? Illumina, Inc.
[Heading]
Date	7/1/2010
ContentVersion	2.0
FormatVersion	1.0.0
Number of Probes	45281
Number of Controls	974
[Probes]
Species	Source	Search_Key	Transcript	ILMN_Gene	Source_Reference_ID	RefSeq_ID	Unigene_ID	Entrez_Gene_ID	GI	Accession	Symbol	Protein_Product	Probe_Id	Array_Address_Id	Probe_Type	Probe_Start	Probe_Sequence	Chromosome	Probe_Chr_Orientation	Probe_Coordinates	Cytoband	Definition	Ontology_Component	Ontology_Process	Ontology_Function	Synonyms	Obsolete_Probe_Id
Mus musculus	Riken	ILMN_204164	ILMN_204164	THRSP	ri|C730035M01|PX00087M15|AK050300|1404					AK050300	Thrsp		ILMN_1243094	002600193	S	1127	GCCCTGCCTGACCTGGAAACGTAGAGATTCTTCTGCCTCAGGTTCCAGAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_188674	ILMN_245303	2700007P21RIK	NM_173750.2	NM_173750.2		212772	68299772	NM_173750.2	2700007P21Rik	NP_776111.1	ILMN_1238674	003450193	S	1291	CCTGTTAAATGTTACTAACGAAACAAATGCTCTTCAGACTACTTTTAGGC	2	-	106804608-106804657	2qE3	Mus musculus RIKEN cDNA 2700007P21 gene (2700007P21Rik), transcript variant 2, mRNA.				4930448O08Rik; RP23-12N7.2	4930448O08Rik; RP23-12N7.2
Mus musculus	RefSeq	ILMN_188674	ILMN_245303	2700007P21RIK	NM_173750.2	NM_173750.2		212772	68299772	NM_173750.2	2700007P21Rik	NP_776111.1	ILMN_2454720	001710328	S	3100	AAACATACCGTAGAGTTTATAGACAAAAGTATATCTGATCTTGAGTAAAC	2	-	106802799-106802848	2qE3	Mus musculus RIKEN cDNA 2700007P21 gene (2700007P21Rik), transcript variant 2, mRNA.				4930448O08Rik; RP23-12N7.2	4930448O08Rik; RP23-12N7.2
Mus musculus	RefSeq	ILMN_245303	ILMN_245303	2700007P21RIK	NM_173750.2	NM_173750.2		212772	68299772	NM_173750.2	2700007P21Rik	NP_776111.1	ILMN_3062534	001570300	I	20	CAGTGGGATGATTCCCTATGTCTGGAGGTAGAAGATGGTTGTGGTATGGC	2	-	106810479-106810528	2qE3	Mus musculus RIKEN cDNA 2700007P21 gene (2700007P21Rik), transcript variant 2, mRNA.				4930448O08Rik; RP23-12N7.2	4930448O08Rik; RP23-12N7.2
Mus musculus	RefSeq	ILMN_245303	ILMN_245303	2700007P21RIK	NM_173750.2	NM_173750.2		212772	68299772	NM_173750.2	2700007P21Rik	NP_776111.1	ILMN_3140158	002690168	A	2842	GACCTCTGCAGGCTTCGCACCACAGCCTTTTCACGCTGGGCAACATGCAT	2	-	106803057-106803106	2qE3	Mus musculus RIKEN cDNA 2700007P21 gene (2700007P21Rik), transcript variant 2, mRNA.				4930448O08Rik; RP23-12N7.2	4930448O08Rik; RP23-12N7.2
Mus musculus	RefSeq	ILMN_198854	ILMN_198854	LOC233991	XM_146216.2	XM_146216.2			38089106	XM_146216.2	LOC233991		ILMN_1240307	002370397	S	3	GCTGGTGAGAGAACTGGAGGCCATAAAAGAAGATGGAATCATGGATGCTG										
Mus musculus	RefSeq	ILMN_184509	ILMN_245410	DENND4C	NM_001081014.1	NM_001081014.1		329877	124486609	NM_001081014.1	Dennd4c	NP_001074483.1	ILMN_1251139	002900470	S	3186	TGGGGAGCACACAGTCTTCGTCAGAGACTTAATCAGCCTTGATTCCATTG	4	+	86459765-86459814	4qC4	Mus musculus DENN/MADD domain containing 4C (Dennd4c), mRNA.				RP24-468M3.1; 1700065A05Rik; AA420392	RP24-468M3.1; 1700065A05Rik; AA420392
Mus musculus	RefSeq	ILMN_245410	ILMN_245410	DENND4C	NM_001081014.1	NM_001081014.1		329877	124486609	NM_001081014.1	Dennd4c	NP_001074483.1	ILMN_2935307	000730253	S	568	GAAGCCACTCCATCAGCACTCCAAGCAAACTTGAATTATGGAAGTCTGAA	4	+	86420351-86420400	4qC4	Mus musculus DENN/MADD domain containing 4C (Dennd4c), mRNA.				RP24-468M3.1; 1700065A05Rik; AA420392	RP24-468M3.1; 1700065A05Rik; AA420392
Mus musculus	MEEBO	ILMN_185688	ILMN_185688	LOXHD1	scl51741.10.113_85						Loxhd1		ILMN_2429159	005860035	S	7	GGTAGTGGACATGGGGTCTCATATCCGCCAGAGGCTGCTCCTTGCAAGTG										
Mus musculus	MEEBO	ILMN_192283	ILMN_192283	PRPF31	scl33145.14_332				31980641	NM_027328	Prpf31		ILMN_2754227	007150546	S	2017	ACACCATCACCTGCCCCATGAGAACATCAGCATCATGGCCACCACAAAAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISA]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [evidence ISA]; A complex composed of three small nuclear ribonucleoproteins, snRNP U4, snRNP U6 and snRNP U5 [goid 46540] [evidence ISA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The formation of a tri-snRNP complex containing U4 and U6 (or U4atac and U6atac) snRNAs and U5 snRNAs and associated proteins. This includes reannealing of U4 and U6 (or U4atac and U6atac) snRNAs released from previous rounds of splicing to reform the U4/U6 snRNP (or U4atac/U6atac snRNP) as well as the subsequent association of the U5 snRNP with the U4/U6 snRNP (or U4atac/U6atac snRNP) to form a tri-snRNP that is ready to reassemble into another spliceosome complex [goid 244] [evidence ISA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISA]	Interacting selectively with any complex of RNA and protein [goid 43021] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]		
Mus musculus	RefSeq	ILMN_201003	ILMN_310186	LOC100039693	XM_001473202.1	XM_001473202.1		100039693	149272784	XM_001473202.1	LOC100039693	XP_001473252.1	ILMN_1225693	001690601	S	324	CCAGGCTCTGGGGAATAAGGTTGGCTGCAGAATTTCTCACGGTTGGAAGG	Y|NT_161902.3	-	705148-705197		PREDICTED: Mus musculus hypothetical protein LOC100039693 (LOC100039693), mRNA.					
Mus musculus	RefSeq	ILMN_200541	ILMN_310186	LOC100039693	XM_001473202.1	XM_001473202.1		100039693	149272784	XM_001473202.1	LOC100039693	XP_001473252.1	ILMN_1234015	001170100	S	606	TGAGAGGAAACATGGCTCTGAGAAAAACTGGAGTGGGATGGTGCTAGCCC	Y|NT_161902.3	-	704866-704915		PREDICTED: Mus musculus hypothetical protein LOC100039693 (LOC100039693), mRNA.					
Mus musculus	RefSeq	ILMN_210252	ILMN_210252	ARPC3	NM_019824.3	NM_019824.3		56378	142361460	NM_019824.3	Arpc3	NP_062798.1	ILMN_2603725	003710242	S	469	GCTGAGGCAAGAGACCGGACTGAGGCTGTGTGAGAAGGTTTTTGACCCTC	5	+	122855118-122855167	5qF	Mus musculus actin related protein 2/3 complex, subunit 3 (Arpc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	p21Arc; p21-Ar; 1110006A04Rik; AI788639; AA408672; 21kDa	p21Arc; p21-Ar; 1110006A04Rik; AI788639; AA408672; 21kDa
Mus musculus	RefSeq	ILMN_208788	ILMN_208788	TSPAN17	NM_028841.2	NM_028841.2		74257	142386321	NM_028841.2	Tspan17	NP_083117.1	ILMN_2664884	002810273	S	286	ACATCTCGGCGCTGACAGATCTGGGCGGTCTTGACCCCGTGTGGCTGTTT	13	+	54894114-54894163	13qB1	Mus musculus tetraspanin 17 (Tspan17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2210021G21Rik; Tm4sf17; Fbxo23; AI047581	2210021G21Rik; Tm4sf17; Fbxo23; AI047581
Mus musculus	RefSeq	ILMN_208829	ILMN_208829	SLC1A1	NM_009199.2	NM_009199.2		20510	118130482	NM_009199.2	Slc1a1	NP_033225.1	ILMN_1229397	000840242	S	2256	CAATGTACTGTATTGAGACACTGGTAGCTGACAGCCAGTGTTCGGTATAG	19	+	28986998-28987047	19qC1	Mus musculus solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 (Slc1a1), mRNA. XM_001002173 XM_001002184 XM_001002198 XM_001002207	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glutamate(out) + Na+(out) = glutamate(in) + Na+(in) [goid 15501] [evidence IDA]	MEAAC1; EAAC2; EAAC1; EAAT3; D130048G10Rik	MEAAC1; EAAC2; EAAC1; EAAT3; D130048G10Rik
Mus musculus	RefSeq	ILMN_208829	ILMN_208829	SLC1A1	NM_009199.2	NM_009199.2		20510	118130482	NM_009199.2	Slc1a1	NP_033225.1	ILMN_1225873	005870100	S	3552	CAGGTGGTTCTCCTTAGTGGCAGTGAATTGGCAGAGCCGTTCACAAGATC	19	+	28988294-28988343	19qC1	Mus musculus solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 (Slc1a1), mRNA. XM_001002173 XM_001002184 XM_001002198 XM_001002207	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glutamate(out) + Na+(out) = glutamate(in) + Na+(in) [goid 15501] [evidence IDA]	MEAAC1; EAAC2; EAAC1; EAAT3; D130048G10Rik	MEAAC1; EAAC2; EAAC1; EAAT3; D130048G10Rik
Mus musculus	RefSeq	ILMN_217309	ILMN_217309	CNDP1	NM_177450.2	NM_177450.2		338403	31343343	NM_177450.2	Cndp1	NP_803233.1	ILMN_3003575	006860768	S	2010	GTTCACTTTCCAGTCCCAAGAACTGTGGTTCCCAATCATCGGACCCAGGG	18	-	84745460-84745509	18qE4	Mus musculus carnosine dipeptidase 1 (metallopeptidase M20 family) (Cndp1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence ISO]	AI746433; Cn1	AI746433; Cn1
Mus musculus	RefSeq	ILMN_189767	ILMN_234717	LARS	NM_134137.2	NM_134137.2		107045	120537240	NM_134137.2	Lars	NP_598898.2	ILMN_1257702	003390102	S	3664	GGGATGGTTTTCGGATACTTCTGCTCCGAGAATCTCAAGCTGGCTCTAAC	18	-	42362095-42362144	18qB3	Mus musculus leucyl-tRNA synthetase (Lars), mRNA. XM_901187 XM_913429 XM_922755 XM_922767 XM_922771 XM_922775 XM_922782 XM_922785 XM_989215	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6429] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-leucine + tRNA(Leu) = AMP + diphosphate + L-leucyl-tRNA(Leu) [goid 4823] [evidence IEA]	3110009L02Rik; mKIAA1352; AW536573; 2310045K21Rik	3110009L02Rik; mKIAA1352; AW536573; 2310045K21Rik
Mus musculus	RefSeq	ILMN_234717	ILMN_234717	LARS	NM_134137.2	NM_134137.2		107045	120537240	NM_134137.2	Lars	NP_598898.2	ILMN_2899591	003190327	S	3347	GGCACTTCTCCACCAAAATCGACATCAGGCAAGGAGATAGCTGTGAGTCC	18	-	42369713-42369762	18qB3	Mus musculus leucyl-tRNA synthetase (Lars), mRNA. XM_901187 XM_913429 XM_922755 XM_922767 XM_922771 XM_922775 XM_922782 XM_922785 XM_989215	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6429] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-leucine + tRNA(Leu) = AMP + diphosphate + L-leucyl-tRNA(Leu) [goid 4823] [evidence IEA]	3110009L02Rik; mKIAA1352; AW536573; 2310045K21Rik	3110009L02Rik; mKIAA1352; AW536573; 2310045K21Rik
Mus musculus	RefSeq	ILMN_215341	ILMN_215341	UGT3A2	NM_144845.3	NM_144845.3		223337	142365155	NM_144845.3	Ugt3a2	NP_659094.1	ILMN_2658355	000520358	S	1782	CTGATGCACCCGAGTTAGTACCTCACTACTTTTGGCCCTGTTTTCCTCTT	15	+	9300211-9300260	15qA1	Mus musculus UDP glycosyltransferases 3 family, polypeptide A2 (Ugt3a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	MGC37820; AI313915	MGC37820; AI313915
Mus musculus	RefSeq	ILMN_196085	ILMN_253473	TRDN	XM_483890.5	XM_483890.5		76757	149260677	XM_483890.5	Trdn	XP_483890.5	ILMN_2521511	003190022	S	883	ACTGAAGAAAAGGCTAAGAAGGAAATGAAAGTTGGAAAACAGGAGAAAGT	10	+	32915784-32915833	10qA4	PREDICTED: Mus musculus triadin (Trdn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]		
Mus musculus	RefSeq	ILMN_199509	ILMN_317407	EG382639	XM_001477883.1	XM_001477883.1		382639	149263558	XM_001477883.1	EG382639	XP_001477933.1	ILMN_1250745	004120424	S	1143	CCTTCTCCTGCACATACACCCTGAAGAGGCATGAACGGACACACTCTGGG	12	+	113918622-113918671	12qF1	PREDICTED: Mus musculus predicted gene, EG382639, transcript variant 1 (EG382639), mRNA.					
Mus musculus	RefSeq	ILMN_215300	ILMN_215300	ZFP329	NM_026046.3	NM_026046.3		67230	133505150	NM_026046.3	Zfp329	NP_080322.2	ILMN_2691286	000990039	S	1705	CTTGAGTGAACAAAGGATTTGTTTTCAGATGTGACTTCCCTTGCTCGCAG	7	-	13395305-13395354	7qA1	Mus musculus zinc finger protein 329 (Zfp329), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2810439M05Rik; ZNF329; 4632409L22Rik	2810439M05Rik; ZNF329; 4632409L22Rik
Mus musculus	RefSeq	ILMN_215300	ILMN_215300	ZFP329	NM_026046.3	NM_026046.3		67230	133505150	NM_026046.3	Zfp329	NP_080322.2	ILMN_1251148	001400441	S	5341	GGCAATTACATGTGTGATATGTAAGGGGTATGATGTCATGCAACAAGAGG	7	-	13391669-13391718	7qA1	Mus musculus zinc finger protein 329 (Zfp329), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2810439M05Rik; ZNF329; 4632409L22Rik	2810439M05Rik; ZNF329; 4632409L22Rik
Mus musculus	RefSeq	ILMN_198359	ILMN_198359	LOC277902	XM_205594.3	XM_205594.3			38084269	XM_205594.3	LOC277902		ILMN_2531408	003780632	S	220	GCTGGAAACCGTGACCTGCTGGCGGGGAAGCTGGAGTGTGGCTTGTTCCA										
Mus musculus	MEEBO	ILMN_220912	ILMN_220912	6030426L16RIK	scl0077114.1_105	NM_183121.1			34147124	NM_183121.1	6030426L16Rik		ILMN_2728484	005420537	S	590	GAAAAAATGAAAGGTTTAATCTTCCAATGCCAGTTGCCATGGGCAAGCCA										
Mus musculus	RefSeq	ILMN_223273	ILMN_235401	SLC35D2	NM_001001321.3	NM_001001321.3		70484	142369904	NM_001001321.3	Slc35d2	NP_001001321.2	ILMN_1234014	001690593	S	826	CGGTTGCCTACATTGGGATGTTGGTTGGTGGAGACTACATTTTCTCCCTC	13	-	64199648-64199697	13qB3	Mus musculus solute carrier family 35, member D2 (Slc35d2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	UGTrel8; MGC130110; 5730408I21Rik; mUGTrel8; MGC130109; SQV7L; hfrc	UGTrel8; MGC130110; 5730408I21Rik; mUGTrel8; MGC130109; SQV7L; hfrc
Mus musculus	RefSeq	ILMN_222307	ILMN_222307	ARID4B	NM_198122.1	NM_198122.1		94246	37694069	NM_198122.1	Arid4b	NP_937755.1	ILMN_3133267	006450685	A	3571	CCCACAACAGCAAGTCTCCAGCAAGGGTACAGTCTCCAGGAAAAGGTGGC	13	+	14285720-14285769	13qA1	Mus musculus AT rich interactive domain 4B (RBP1-like) (Arid4b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	BCAA; 6720480E17Rik; 5930400I17; BRCAA1; 6330417L24Rik; SAP180; Rbp1l1; RBBP1L1; 9330186M13	BCAA; 6720480E17Rik; 5930400I17; BRCAA1; 6330417L24Rik; SAP180; Rbp1l1; RBBP1L1; 9330186M13
Mus musculus	Riken	ILMN_206927	ILMN_206927	MTAP6	ri|C230092K21|PX00177D07|AK082709|4784					AK082709	Mtap6		ILMN_1213815	007560427	S	4393	GCCCGCCCCTCAGATGCGACGACTCACTTCAAATGTTGGTCTGTGCCTTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214618	ILMN_214618	ETFA	NM_145615.2	NM_145615.2		110842	31981825	NM_145615.2	Etfa	NP_663590.2	ILMN_2800655	006020576	S	1079	GATCCAGAAGCTCCAATTTTCCAGGTGGCAGATTATGGAATAGTTGCAGA	9	-	55259765-55259814	9qB	Mus musculus electron transferring flavoprotein, alpha polypeptide (Etfa), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system [goid 17133] [evidence TAS]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence TAS]	D9Ertd394e; 2010200I21Rik	D9Ertd394e; 2010200I21Rik
Mus musculus	Riken	ILMN_207351	ILMN_207351	9530095N04RIK	ri|9530095N04|PX00654M15|AK079300|940					AK079300	9530095N04Rik		ILMN_2586958	002510025	S	846	GGTTGACCCACAAAGTGGAAGGAGAGAACTGACCTCTGACCTCCGTGTGT										
Mus musculus	MEEBO	ILMN_223159	ILMN_223159	MGA	scl0029808.1_271	NM_013720.1			7305248	NM_013720.1	Mga		ILMN_1237148	003800554	S	8904	ATGAATTTAACAGGAAGTGACCAGGAAGGCCGGGGGAGCAAGGTGATGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]		
Mus musculus	RefSeq	ILMN_214732	ILMN_329956	4632428N05RIK	NM_028732.3	NM_028732.3		74048	142349860	NM_028732.3	4632428N05Rik	NP_083008.1	ILMN_2651297	004760274	S	4430	CGTGTGTTCTTGTTTATTTGACATCTGTCTCCATATCAGTCTTGAAAGCC	10	+	59835069-59835118	10qB4	Mus musculus RIKEN cDNA 4632428N05 gene (4632428N05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_202838	ILMN_202838	5830436K05RIK	ri|6720422K01|PX00059I12|AK032734|1961					AK032734	5830436K05Rik		ILMN_2552695	000730379	S	1433	GCACACGAGGGTGACAGTGTATGAACAACTGTAGCTGAGCCCATGGCAGA										
Mus musculus	RefSeq	ILMN_255454	ILMN_255454	OBOX2	NR_003269.1	NR_003269.1		246792	118200339	NR_003269.1	Obox2		ILMN_2980721	001340273	S	241	GTACAACGAAATCAAGTCTTTCAGTCCCTGAAAGGAACCTACTTAAGCAA	7	+	15982333-15982382	7qA2	Mus musculus oocyte specific homeobox 2 (Obox2), non-coding RNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_204552	ILMN_204552	B230385N19RIK	ri|B230385N19|PX00162G05|AK046447|2236					AK046447	B230385N19Rik		ILMN_2565850	005700594	S	1842	TAAATGATGCACCGGAGACTCAGAGCAAATCCCCCCGGGCCAGCAGCATG										
Mus musculus	MEEBO	ILMN_195365	ILMN_195365	2010204O13RIK	scl076693.2_66						2010204O13Rik		ILMN_2514939	004200139	S	5	CATCTCTTCCTACGGGTTCAATATCGACTTAATGCCAACAACGTCCAGAT										
Mus musculus	RefSeq	ILMN_186564	ILMN_323008	5430433J05RIK	XM_001480709.1	XM_001480709.1		71363	149268065	XM_001480709.1	5430433J05Rik	XP_001480759.1	ILMN_2436600	006770274	S	327	GATCCAATGGCTTTGAAGATTACAGGACCCTCAACCAGCTACCGTCCCAA				16qC3.3	PREDICTED: Mus musculus RIKEN cDNA 5430433J05 gene (5430433J05Rik), mRNA.					
Mus musculus	MEEBO	ILMN_211719	ILMN_211719	PRRXL1	scl0107751.1_7	XM_138962.3			38075904	XM_138962.3	Prrxl1		ILMN_2618862	006280634	S	146	CCTTTTGGGAACCACTCTACAGGGGATTTTGATGATGGGTTTCTTAGAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the trigeminal nerve over time, from its formation to the mature structure. The trigeminal nerve is composed of three large branches. They are the ophthalmic (V1, sensory), maxillary (V2, sensory) and mandibular (V3, motor and sensory) branches. The sensory ophthalmic branch travels through the superior orbital fissure and passes through the orbit to reach the skin of the forehead and top of the head. The maxillary nerve contains sensory branches that reach the pterygopalatine fossa via the inferior orbital fissure (face, cheek and upper teeth) and pterygopalatine canal (soft and hard palate, nasal cavity and pharynx). The motor part of the mandibular branch is distributed to the muscles of mastication, the mylohyoid muscle and the anterior belly of the digastric. The mandibular nerve also innervates the tensor veli palatini and tensor tympani muscles. The sensory part of the mandibular nerve is composed of branches that carry general sensory information from the mucous membranes of the mouth and cheek, anterior two-thirds of the tongue, lower teeth, skin of the lower jaw, side of the head and scalp and meninges of the anterior and middle cranial fossae [goid 21559] [evidence IMP]; The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input [goid 21516] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The series of events in which a chemical stimulus is received by a cell and converted into a molecular signal [goid 9593] [evidence IMP]; The series of events in which a temperature stimulus (hot or cold) is received and converted into a molecular signal [goid 16048] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The series of events required for an organism to receive a sensory mechanical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50954] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_220750	ILMN_220750	9330152L17	scl54662.1.1_35	NM_177917.2			31342672	NM_177917.2	9330152L17		ILMN_2726288	000770243	S	1472	CTGCTGCCTTTTATCTGTGAGGTGGTAATGAAATACCAGGAATGGTGTGT										
Mus musculus	RefSeq	ILMN_217749	ILMN_217749	STRN4	NM_133789.2	NM_133789.2		97387	89886481	NM_133789.2	Strn4	NP_598550.2	ILMN_3159156	001770008	A	2729	CCTCAGTCCATTCCTCTTGCTTCCCAACACTAACCAAGCCTCTGGGGCCA	7	+	17425892-17425941	7qA2	Mus musculus striatin, calmodulin binding protein 4 (Strn4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	C80611; ZIN; zinedin	C80611; ZIN; zinedin
Mus musculus	RefSeq	ILMN_200497	ILMN_200497	LOC383272	XM_356958.1	XM_356958.1			38082781	XM_356958.1	LOC383272		ILMN_1228128	006350575	S	994	TTAGCCTCTGTCTTAAAGGCCGTTGATGCTCACTGCCATCGGCTGCGCCG										
Mus musculus	MEEBO	ILMN_193529	ILMN_193529	A930014I12RIK	scl0077805.1_36				51770776	XM_484702	A930014I12Rik		ILMN_1231158	006400440	S	10	TATAATGTAGAATAAAATAATAAAATACTTGATAGCTTTTTTTAAGTGAT										
Mus musculus	MEEBO	ILMN_193529	ILMN_193529	A930014I12RIK	scl0077805.1_36				51770776	XM_484702	A930014I12Rik		ILMN_1228679	004760709	S	19	CAGATACACACAACGTAGCCTCCTTCCCTATTAGATTCTTAGAAGGGCTG										
Mus musculus	RefSeq	ILMN_222242	ILMN_222242	HSF4	NM_011939.2	NM_011939.2		26386	118129985	NM_011939.2	Hsf4	NP_036069.1	ILMN_2746797	000540112	S	1308	GCCTGGGGCTTTAACCCTGTACAACGTCACCGAGAGCAACGCCTCCTACT	8	+	107799477-107799526	8qD3	Mus musculus heat shock transcription factor 4 (Hsf4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mHSF4	mHSF4
Mus musculus	RefSeq	ILMN_185005	ILMN_255593	CHST9	NM_199055.2	NM_199055.2		71367	118130763	NM_199055.2	Chst9	NP_951010.1	ILMN_1250946	003710010	S	1133	TTAAGGATAGGCACTCCTCTGATGAAAGAACCAATGCCCACGTGGTAAGG	18	-	15610870-15610919	18qA1	Mus musculus carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 (Chst9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-acetyl-D-galactosamine = adenosine 3',5'-bisphosphate + N-acetyl-D-galactosamine 4-sulfate [goid 1537] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC130338; 5430438D01Rik	MGC130338; 5430438D01Rik
Mus musculus	RefSeq	ILMN_210195	ILMN_210195	SGMS2	NM_028943.3	NM_028943.3		74442	146141147	NM_028943.3	Sgms2	NP_083219.2	ILMN_1227663	000430360	S	1718	CCGTGCTGCAACCGAAGGCACGTGCGGCTTTATATTTATTTTCAGAGAAC				3qG3	Mus musculus sphingomyelin synthase 2 (Sgms2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence ISS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6686] [evidence ISS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: CDP-choline + N-acylsphingosine = CMP + sphingomyelin [goid 47493] [evidence ISS]; Catalysis of the reaction: a ceramide + a phosphatidylcholine = a sphingomyelin + a 1,2-diacyl-sn-glycerol [goid 33188] [evidence IEA]	AI854299; 4933405A16Rik	AI854299; 4933405A16Rik
Mus musculus	RefSeq	ILMN_197580	ILMN_239941	LOC632632	XM_906825.2	XM_906825.2		632632	94397353	XM_906825.2	LOC632632	XP_911918.2	ILMN_1252086	001690138	S	104	AGAAGCAGCAAGCAAATCACATGATGGCAGAGAGTGCACCTGCAGAGGCC	14	-	105438834-105438883		PREDICTED: Mus musculus similar to 60S ribosomal protein L29 (P23) (LOC632632), mRNA.					
Mus musculus	Riken	ILMN_207283	ILMN_207283	LAT	ri|G630067A17|PL00013L02|AK090369|2056					AK090369	Lat		ILMN_1242795	004880082	S	1949	CTACGATCCCAGCATCAGGAGGCAGTGGCAGGAGGGTTGAATTTGAGGCT						An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell [goid 43303] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence TAS]	 [goid 5057] [evidence TAS]		
Mus musculus	RefSeq	ILMN_216747	ILMN_216747	TCF12	NM_011544.1	NM_011544.1		21406	6755729	NM_011544.1	Tcf12	NP_035674.1	ILMN_2976577	000620463	S	2582	AAGGGAAAAGTTCATCTCCCAAGCTGATGTACACTCAGCTGATGCCAGCA	9	-	71644687-71644736	9qD	Mus musculus transcription factor 12 (Tcf12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	HTF4; HEB; HTF-4; REB; ALF1; ME1	HTF4; HEB; HTF-4; REB; ALF1; ME1
Mus musculus	Riken	ILMN_202852	ILMN_202852	A130004B21RIK	ri|A130004B21|PX00121E22|AK037294|1000					AK037294	A130004B21Rik		ILMN_2552800	004050240	S	893	GTATCCACATGGGTGTTCACAACTGTCTGCAACTTCAATCTGAGGGGATC										
Mus musculus	RefSeq	ILMN_209217	ILMN_209217	LRTM1	NM_176920.3	NM_176920.3		319476	142383744	NM_176920.3	Lrtm1	NP_795894.1	ILMN_2593694	004280048	S	1374	ATCAGCCTGAGAGCCTTCATTTCCAAGGTCCCCTCGATCACTGAGGGCCC	14	+	29840930-29840940:29840941-29840979	14qA3	Mus musculus leucine-rich repeats and transmembrane domains 1 (Lrtm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC118429; A930016D02Rik	MGC118429; A930016D02Rik
Mus musculus	RefSeq	ILMN_209217	ILMN_209217	LRTM1	NM_176920.3	NM_176920.3		319476	142383744	NM_176920.3	Lrtm1	NP_795894.1	ILMN_1241151	001440682	S	1433	ATCTGAGTGAGCTTGATGTGTTCGATGCTCCTGTCCCATGTTTTATCTTC	14	+	29840989-29841038	14qA3	Mus musculus leucine-rich repeats and transmembrane domains 1 (Lrtm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC118429; A930016D02Rik	MGC118429; A930016D02Rik
Mus musculus	RefSeq	ILMN_197201	ILMN_250714	MAMDC4	NM_001081199.1	NM_001081199.1		381352	124487084	NM_001081199.1	Mamdc4	NP_001074668.1	ILMN_1258396	004610154	S	3733	GCGGATCATGTTACCCTCCCAGAATCAATCACCAGCAACCCACAGAGCCC	2	-	25418842-25418889:25419052-25419053	2qA3	Mus musculus MAM domain containing 4 (Mamdc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Gm995	Gm995
Mus musculus	RefSeq	ILMN_250714	ILMN_250714	MAMDC4	NM_001081199.1	NM_001081199.1		381352	124487084	NM_001081199.1	Mamdc4	NP_001074668.1	ILMN_2831908	003420703	S	3552	TAGCCAGGGTGAAGTGGCAGCACCCGTGTCTGTGCCAGTTGCCGTTGGAG	2	-	25419185-25419227:25419686-25419692	2qA3	Mus musculus MAM domain containing 4 (Mamdc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Gm995	Gm995
Mus musculus	RefSeq	ILMN_197539	ILMN_235132	LOC639558	XR_002224.1	XR_002224.1		639558	94397294	XR_002224.1	LOC639558		ILMN_2528484	004610358	S	402	GATCCCTGTGGCTGTTACAGTCTGGTATTGGGCTCCTCAAGTTCTTCTGC	14	-	90046873-90046922	14qE2.1	PREDICTED: Mus musculus similar to Cell division protein kinase 4 (Cyclin-dependent kinase 4) (PSK-J3) (CRK3) (LOC639558), mRNA.					
Mus musculus	RefSeq	ILMN_211267	ILMN_211267	2610003J06RIK	NM_028101.1	NM_028101.1		72106	21312439	NM_028101.1	2610003J06Rik	NP_082377.1	ILMN_2896492	005270204	S	1904	TGATGGCCCTGACCAGGAAATCACAGAGCCCGCCCCATCTCAGGCCTCTT	17	+	25559259-25559308	17qA3.3	Mus musculus RIKEN cDNA 2610003J06 gene (2610003J06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217876	ILMN_217876	NPM3	NM_008723.1	NM_008723.1		18150	6679109	NM_008723.1	Npm3	NP_032749.1	ILMN_3093150	006900241	A	237	ACGAGTGTAATGTGGTGGAAGTTGTGGCCCGGGATCACGACAATCAGGAG	19	-	45823284-45823333	19qC3	Mus musculus nucleoplasmin 3 (Npm3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IDA]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nub1	Nub1
Mus musculus	RefSeq	ILMN_217876	ILMN_217876	NPM3	NM_008723.1	NM_008723.1		18150	6679109	NM_008723.1	Npm3	NP_032749.1	ILMN_3020829	002060561	I	697	CACCTCTTCTGACCCACCTAACCCAGATTCAGTCCCCAGCACTGCAAAAA	19	-	45822337-45822386	19qC3	Mus musculus nucleoplasmin 3 (Npm3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IDA]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nub1	Nub1
Mus musculus	RefSeq	ILMN_217803	ILMN_217803	OLFR1355	NM_207571.2	NM_207571.2		257734	147906593	NM_207571.2	Olfr1355	NP_997454.1	ILMN_1215688	003180672	S	793	GCTTATCAAGCCACCTCATAATGCATCTTGTACCTGTTCTATTGGGAGCC				10qC1	Mus musculus olfactory receptor 1355 (Olfr1355), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR139-6; GA_x5J8B7W4DUT-12263-11330	MOR139-6; GA_x5J8B7W4DUT-12263-11330
Mus musculus	MEEBO	ILMN_193727	ILMN_193727	AW228700	scl0100951.9_45						AW228700		ILMN_2499862	002260592	S	4	AGGCACCTTGTCACCTGAATCTTCACCCCATGAAGGGAAAGCAGGCTTCT										
Mus musculus	RefSeq	ILMN_214145	ILMN_214145	4921521F21RIK	NM_027582.3	NM_027582.3		70861	148540063	NM_027582.3	4921521F21Rik	NP_081858.2	ILMN_1240216	002470653	S	1053	GAGTTCCACTTGCCAGCAGAGGACATGGCAGTTATAGATAGGCTGAACAG				1qC2	Mus musculus RIKEN cDNA 4921521F21 gene (4921521F21Rik), mRNA.				AI451536; AI503553	AI451536; AI503553
Mus musculus	MEEBO	ILMN_188632	ILMN_188632	2310010J17RIK	scl31055.5.1_24						2310010J17Rik		ILMN_2454339	006480113	S	2	TGTGACCAGGAACACCTAGAGTAGTGTATTTGCTTTGTTAAAGAGTGACT										
Mus musculus	RefSeq	ILMN_188756	ILMN_231619	CANX	NM_007597.2	NM_007597.2		12330	31542338	NM_007597.2	Canx	NP_031623.1	ILMN_2632083	004250093	S	3348	AATATTATTACACCACACTGAAATGTATTCAGAAACAGATGTTTCAATTT	11	-	50108268-50108317	11qB1.3	Mus musculus calnexin (Canx), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D11Ertd153e; 1110069N15Rik; CNX; AI988026	D11Ertd153e; 1110069N15Rik; CNX; AI988026
Mus musculus	Riken	ILMN_204009	ILMN_204009	FTO	ri|9830160I16|PX00118H22|AK036677|3888					AK036677	Fto		ILMN_1215089	000730142	S	3834	GGAACCTTATGACCGCGCCTGTGCTGATAACCGAAGCCTGCACTTCACAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [pmid 10501967] [evidence IEP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [pmid 10501967] [evidence IEP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_208657	ILMN_208657	EIF4A3	NM_138669.1	NM_138669.1		192170	20149755	NM_138669.1	Eif4a3	NP_619610.1	ILMN_2588254	007050026	S	1060	CCCGGGGCCTGGATGTCCCTCAGGTGTCCCTCATCATTAACTACGACCTG	11	-	119150211-119150260	11qE2	Mus musculus eukaryotic translation initiation factor 4A, isoform 3 (Eif4a3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	mKIAA0111; MGC6715; MGC6664; Ddx48; 2400003O03Rik	mKIAA0111; MGC6715; MGC6664; Ddx48; 2400003O03Rik
Mus musculus	MEEBO	ILMN_191464	ILMN_191464	6820402O20RIK	scl20030.1_2				51706470	XM_133187	6820402O20Rik		ILMN_2479282	006330349	S	20	GAGGCTGTACTGTGAGTGGCAGCTGGAGGTTGGGCGCACAACTGCTTTTT										
Mus musculus	Riken	ILMN_207191	ILMN_207191	A730071L15RIK	ri|A730071L15|PX00661A08|AK080521|1617					AK080521	A730071L15Rik		ILMN_1215497	000670450	S	1478	CTGTGTAGTAACCCATACCTGTAAACCTAGCACTGGGAAGGTGGCGACAG										
Mus musculus	RefSeq	ILMN_196252	ILMN_260765	EPB4.9	NM_013514.3	NM_013514.3		13829	133893373	NM_013514.3	Epb4.9	NP_038542.1	ILMN_1245717	005890059	S	2529	GCCCAGGTCTGGGTTTCGTTTTTACCCAGACCCTGGCACTCCCTGTCCAC	14	-	71003541-71003590	14qD2	Mus musculus erythrocyte protein band 4.9 (Epb4.9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AI325486; dematin	AI325486; dematin
Mus musculus	RefSeq	ILMN_196252	ILMN_260765	EPB4.9	NM_013514.3	NM_013514.3		13829	133893373	NM_013514.3	Epb4.9	NP_038542.1	ILMN_2615749	005870403	S	457	GGGAGCGTCAGCTCCTCCAGAGACTCCAGTGTGCCCGGCTCTCCCTCCAG	14	-	71017768-71017817	14qD2	Mus musculus erythrocyte protein band 4.9 (Epb4.9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AI325486; dematin	AI325486; dematin
Mus musculus	RefSeq	ILMN_205336	ILMN_234460	USP47	NM_133758.2	NM_133758.2		74996	48928013	NM_133758.2	Usp47	NP_598519.2	ILMN_1256774	006840341	S	1600	GTATGAGCTCTTCTCAGTGATGGTGCATTCAGGGAGTGCTGCTGGAGGAC	7	+	119225955-119226004	7qF1	Mus musculus ubiquitin specific peptidase 47 (Usp47), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC118655; A630020C16Rik; 4930502N04Rik	MGC118655; A630020C16Rik; 4930502N04Rik
Mus musculus	RefSeq	ILMN_201594	ILMN_234460	USP47	NM_133758.2	NM_133758.2		74996	48928013	NM_133758.2	Usp47	NP_598519.2	ILMN_1249419	007380326	S	4345	GGCCGGACATGGTTTGGGTAATCCCATGACACCAGCACTGATTGGACTGC	7	+	119253705-119253754	7qF1	Mus musculus ubiquitin specific peptidase 47 (Usp47), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC118655; A630020C16Rik; 4930502N04Rik	MGC118655; A630020C16Rik; 4930502N04Rik
Mus musculus	RefSeq	ILMN_234460	ILMN_234460	USP47	NM_133758.2	NM_133758.2		74996	48928013	NM_133758.2	Usp47	NP_598519.2	ILMN_2952841	003290167	S	5294	CATCTATGGAATAAAGTTTCTCGGGGGCCTTGGCGTAGACTCGGTGCCAC	7	+	119254654-119254703	7qF1	Mus musculus ubiquitin specific peptidase 47 (Usp47), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC118655; A630020C16Rik; 4930502N04Rik	MGC118655; A630020C16Rik; 4930502N04Rik
Mus musculus	RefSeq	ILMN_231881	ILMN_231881	OLFR1318	NM_001011802.1	NM_001011802.1		258022	58801369	NM_001011802.1	Olfr1318	NP_001011802.1	ILMN_3162252	004010367	S	876	TGAGATGAAGGTTGCGATGAGGAGACTATTTATTAGGGCTTTACATTTCA	2	+	111996985-111997034	2qE3	Mus musculus olfactory receptor 1318 (Olfr1318), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR245-16	MOR245-16
Mus musculus	RefSeq	ILMN_219842	ILMN_314090	LOC677259	XR_033749.1	XR_033749.1		677259	149259301	XR_033749.1	LOC677259		ILMN_2714274	004920132	S	1531	CTATGGAAACTTTGAATATTTGTATTACATGGATTTTTATTCACTTTTCA					PREDICTED: Mus musculus similar to Ornithine decarboxylase (ODC) (LOC677259), misc RNA.					
Mus musculus	MEEBO	ILMN_187147	ILMN_187147	4930544L04RIK	scl31949.1.3_12						4930544L04Rik		ILMN_1256258	006590494	S	1	TCGCTGGGTTCGCTCAGTCTAGGTGGTTTCCGTTTTCCACTTGTATGACA										
Mus musculus	RefSeq	ILMN_197664	ILMN_197664	LOC239603	XM_139531.2	XM_139531.2			38077206	XM_139531.2	LOC239603		ILMN_2528922	001440471	S	570	CCTCTGGCTAAAACACAGTGATACAGACCCAGCCAGCATTATGTCCCCGG										
Mus musculus	RefSeq	ILMN_199568	ILMN_199568	LOC382746	XM_356656.1	XM_356656.1			38074417	XM_356656.1	LOC382746		ILMN_2535690	004540204	S	323	TGGAAGAGCTGGCGTTCCAGGGACTGAACGAGGAAGAACAGAGCAAGGAG										
Mus musculus	MEEBO	ILMN_195158	ILMN_195158	BIRC1CL	scl0079199.1_231						Birc1cl		ILMN_1231568	006330446	S	5	GCACCCAAGGAGCTGAAGGGGTCTGCAACCCTAAAGATGGAAATAAAGGC										
Mus musculus	RefSeq	ILMN_222880	ILMN_222880	TRMT11	NM_028604.2	NM_028604.2		73681	114051170	NM_028604.2	Trmt11	NP_082880.2	ILMN_1242132	004560097	S	1934	GGCCATGCAGAGGCAAGGAAACCTAAGGGCTGAGAACTGTGGAGAATCCA	10	-	30254406-30254455	10qA4	Mus musculus tRNA methyltransferase 11 homolog (S. cerevisiae) (Trmt11), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AW213713; 3110045I18Rik; 2410075D05Rik	AW213713; 3110045I18Rik; 2410075D05Rik
Mus musculus	RefSeq	ILMN_210092	ILMN_311371	LOC100041504	XM_001473258.1	XM_001473258.1		100041504	149275207	XM_001473258.1	LOC100041504	XP_001473308.1	ILMN_2602139	006420376	S	609	TCCGTCCACACCCTTGCCCTGCTTCAACCATTACATCTGCACGGCCATCC	Un|NT_166434.1	-	212-261		PREDICTED: Mus musculus similar to beta chemokine Exodus-2 (LOC100041504), mRNA.					
Mus musculus	RefSeq	ILMN_212211	ILMN_212211	SPRR2E	NM_011471.2	NM_011471.2		20759	31981481	NM_011471.2	Sprr2e	NP_035601.1	ILMN_1249602	000730093	S	420	GCCTGTAATGACCTCTTTTAGGGAAGGCATTTTCCTTAGGTTGTCCTGCC	3	+	92157144-92157193	3qF1	Mus musculus small proline-rich protein 2E (Sprr2e), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence NAS]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188021	ILMN_188021	TNFSF9	NM_009404.3	NM_009404.3		21950	141803209	NM_009404.3	Tnfsf9	NP_033430.1	ILMN_2449157	000380348	S	412	GAGAGAATAATGCAGACCAGGTCACCCCTGTTTCCCACATTGGCTGCCCC	17	+	57245219-57245268	17qD	Mus musculus tumor necrosis factor (ligand) superfamily, member 9 (Tnfsf9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	4-1BB-L; Cd137l; 4-1BBL; AI848817; Ly63l	4-1BB-L; Cd137l; 4-1BBL; AI848817; Ly63l
Mus musculus	MEEBO	ILMN_194657	ILMN_194657	D330004O07RIK	scl0319397.2_115						D330004O07Rik		ILMN_2508387	002360347	S	4	GGGGGTGGGGGAGAAGTTGCTCTAAGTTTGTGAGACATTCCTAAATTATG										
Mus musculus	RefSeq	ILMN_211815	ILMN_211815	MC5R	NM_013596.1	NM_013596.1		17203	7305262	NM_013596.1	Mc5r	NP_038624.1	ILMN_2619762	003420441	S	957	CCTGCCCTCAGAACGTCTACTGCTCTTGCTTTATGTCTTACTTCAACATG	18	+	68499160-68499209	18qE2	Mus musculus melanocortin 5 receptor (Mc5r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with melanocortin to initiate a change in cell activity [goid 4977] [evidence IEA]		
Mus musculus	RefSeq	ILMN_247115	ILMN_247115	LEPRE1	NM_001042411.1	NM_001042411.1		56401	109150438	NM_001042411.1	Lepre1	NP_001035874.1	ILMN_3150634	002630278	A	2133	GGGCCTATGTAGGCAGCTGCCGTCAGCAGCGTGATATATTTAAGTGTCTG	4	+	118920888-118920937	4qD2.1	Mus musculus leprecan 1 (Lepre1), transcript variant 3, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-3-hydroxy-L-proline + succinate + CO2 [goid 19797] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410024C15Rik; Gros1	2410024C15Rik; Gros1
Mus musculus	MEEBO	ILMN_215710	ILMN_215710	PTPRF	scl0019268.1_215	NM_011213.1			18702312	NM_011213.1	Ptprf		ILMN_1219189	001440441	S	2743	CTTCGAGTGACAGGACTGACCACATCTACCACGGAACTGACCTGGGACCC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192180	ILMN_233590	HMBOX1	NM_177338.5	NM_177338.5		219150	146198603	NM_177338.5	Hmbox1	NP_796312.2	ILMN_2664219	002140228	S	2635	GGAGGTCCTTGCCTAGCTAGGGGCAGAAAAAGCAGGGGACATTTACCACC				14qD1	Mus musculus homeobox containing 1 (Hmbox1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI604847; F830020C16Rik; AI451877	AI604847; F830020C16Rik; AI451877
Mus musculus	RefSeq	ILMN_214013	ILMN_214013	SLC4A1AP	NM_009206.1	NM_009206.1		20534	33469098	NM_009206.1	Slc4a1ap	NP_033232.1	ILMN_2969435	003800259	S	2025	TGGCTACTGATTGGCTCAGAGTCCCAAAGGAAGACCATGTGGACCGCAGG	5	+	31856159-31856161:31856162-31856208	5qB1	Mus musculus solute carrier family 4 (anion exchanger), member 1, adaptor protein (Slc4a1ap), mRNA.				kanadaptin	kanadaptin
Mus musculus	RefSeq	ILMN_232659	ILMN_232659	BMP8A	NM_007558.1	NM_007558.1		12163	6671643	NM_007558.1	Bmp8a	NP_031584.1	ILMN_2910653	004390438	S	1563	GGGTCAGCACTGAAGGCCCACATGAGGAAGACTGATCCTTGGCCATCCTC	4	-	122815252-122815301	4qD2.2	Mus musculus bone morphogenetic protein 8a (Bmp8a), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence TAS]	OP-2; OP2; Bmp7r1	OP-2; OP2; Bmp7r1
Mus musculus	RefSeq	ILMN_222955	ILMN_222955	THOC3	NM_028597.1	NM_028597.1		73666	21312089	NM_028597.1	Thoc3	NP_082873.1	ILMN_2888342	003890039	S	1463	GGGTTTTGTGTTGGTGTATTTGTGTTAGCAGTTCCCATCCCTCCCCGCTG	13	-	54469251-54469300	13qB1	Mus musculus THO complex 3 (Thoc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	2410044K02Rik; AL033344	2410044K02Rik; AL033344
Mus musculus	RefSeq	ILMN_197352	ILMN_312590	LOC635097	XR_034670.1	XR_034670.1		635097	149250030	XR_034670.1	LOC635097		ILMN_1241954	006980328	S	1112	AGCGTTGAGGAAGCAGCAGGAGCTAAAGAAGGAGAACTCTATCCTGTCGG	2	-	144190259-144190308	2qG1	PREDICTED: Mus musculus similar to nuclear domain 10 protein 52 like 1 (LOC635097), misc RNA.					
Mus musculus	MEEBO	ILMN_215880	ILMN_215880	3110013H01RIK	scl40101.5.1_17	XM_203393.1			25025681	XM_203393.1	3110013H01Rik		ILMN_2664726	004280626	S	718	CACTGTGCGGAGTGTGGTCACTGAGGAGTTCAATGGCAGTGACTGGGAAC										
Mus musculus	RefSeq	ILMN_209209	ILMN_209209	IQCH	XM_134960.5	XM_134960.5		78250	94386168	XM_134960.5	Iqch	XP_134960.1	ILMN_1216298	003890484	S	3351	GGGAAGTTAGTTTGCTTTGTTTGCCAAGAGATAAATCAGAACAAATTGTA	9	-	63269533-63269582	9qC	PREDICTED: Mus musculus IQ motif containing H, transcript variant 1 (Iqch), mRNA.					
Mus musculus	RefSeq	ILMN_197163	ILMN_197163	LOC193438	XM_111432.2	XM_111432.2			38074381	XM_111432.2	LOC193438		ILMN_1213373	007160487	S	198	GGCCCAGGAAGTACACGAGAAGCTACAGGGATGGTAGGATTCCAATGCTG										
Mus musculus	RefSeq	ILMN_240190	ILMN_240190	ESPNL	NM_001033292.1	NM_001033292.1		227357	85701793	NM_001033292.1	Espnl	NP_001028464.1	ILMN_2789925	005090086	S	5214	ATATCTCAGAATGAGCCACCTGTGCTGGGCAGCCCTATCTCATCCTATGG	1	+	93178481-93178530	1qD	Mus musculus espin-like (Espnl), mRNA.				Gm556	Gm556
Mus musculus	Riken	ILMN_204343	ILMN_204343	A930023F12RIK	ri|A930023F12|PX00066F22|AK044567|1654					AK044567	A930023F12Rik		ILMN_1249274	002030382	S	1373	GCTACGTTCCAGCAACTCGAGTTTCAAGGGCACTAATTTCCTCCGCTGCT										
Mus musculus	RefSeq	ILMN_220767	ILMN_220767	NFIB	NM_008687.2	NM_008687.2		18028	31982160	NM_008687.2	Nfib	NP_032713.2	ILMN_2726585	004060075	S	2407	GCTCTATGGAAGAAATGCCTCTATGTGGGTAAAGGGTTACCTCTGCATGC	4	-	81767194-81767243	4qC3	Mus musculus nuclear factor I/B (Nfib), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	6720429L07Rik; E030026I10Rik	6720429L07Rik; E030026I10Rik
Mus musculus	RefSeq	ILMN_218433	ILMN_218433	FES	NM_010194.2	NM_010194.2		14159	111185913	NM_010194.2	Fes	NP_034324.2	ILMN_2695793	005420739	S	2541	AGCATCATCTGCCAGGAGCTCCACAGTATCCGCAAGCGGCATCGGTGAGA	7	-	87522815-87522817:87522818-87522864	7qD3	Mus musculus feline sarcoma oncogene (Fes), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	BB137047; FPS; c-fes; AI586313	BB137047; FPS; c-fes; AI586313
Mus musculus	RefSeq	ILMN_218433	ILMN_218433	FES	NM_010194.2	NM_010194.2		14159	111185913	NM_010194.2	Fes	NP_034324.2	ILMN_2771794	007000747	S	433	TGATCCGGGAGCGGCAGCACCTGAGAAAGACGTACAACGAGCAGTGGCAG	7	-	87531720-87531769	7qD3	Mus musculus feline sarcoma oncogene (Fes), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	BB137047; FPS; c-fes; AI586313	BB137047; FPS; c-fes; AI586313
Mus musculus	Riken	ILMN_201764	ILMN_201764	1810043M20RIK	ri|1810043M20|ZX00051M11|AK007762|710					AK007762	1810043M20Rik		ILMN_2544418	004540653	S	171	GTCTTGGTTCTCAACCCTGGCGGACTACTTTTAAGGGGGGTGTCAGGAGG										
Mus musculus	RefSeq	ILMN_251226	ILMN_251226	MCTP2	NM_001024703.1	NM_001024703.1		244049	85701535	NM_001024703.1	Mctp2	NP_001019874.1	ILMN_2828560	002320088	S	285	GCCCAAGCAAACCTTTGGATTTAAGGGTGCAGCATCACCTGGACAGGCGC	7	-	79404308-79404357	7qD1	Mus musculus multiple C2 domains, transmembrane 2 (Mctp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Gm489	Gm489
Mus musculus	RefSeq	ILMN_201085	ILMN_251226	MCTP2	NM_001024703.1	NM_001024703.1		244049	85701535	NM_001024703.1	Mctp2	NP_001019874.1	ILMN_2541024	004780088	S	1385	CCGCAGTGGCAGGAACAGTTTGACTTTCACTACTTCTCTGACAGGATGGG	7	-	79356540-79356589	7qD1	Mus musculus multiple C2 domains, transmembrane 2 (Mctp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Gm489	Gm489
Mus musculus	MEEBO	ILMN_223795	ILMN_223795	OLFR711	scl8840.1.1_89				22128878	NM_147035	Olfr711		ILMN_2769318	005910520	S	650	CCTACGTCTACATAGTGTCTACCATTCTGCGTATACCCTCCACCCAGGGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200749	ILMN_200749	LOC381844	XM_355857.1	XM_355857.1			38085858	XM_355857.1	LOC381844		ILMN_2539866	002970022	S	870	GGTACCAGGGTTGCAGTCTAGGCAAGAGCAGCTTATCTCTGATCCTGTCC										
Mus musculus	MEEBO	ILMN_189885	ILMN_189885	2610024M03RIK	scl3957.1.1_88						2610024M03Rik		ILMN_1255611	004220553	S	1	CGTGGGAAAGCCCCTCACTGGTCCGCAGGTTCTGGTTACAGAAAAGTAAA										
Mus musculus	RefSeq	ILMN_246272	ILMN_246272	IL20RB	NM_001033543.1	NM_001033543.1		213208	85702052	NM_001033543.1	Il20rb	NP_001028715.1	ILMN_3047030	005050753	I	1995	CAACCAGGTGCTTCCAGTCCGTCTTCAGCACAGATGCCAACGGCCTCATC	9	-	100267355-100267404	9qE3.3	Mus musculus interleukin 20 receptor beta (Il20rb), transcript variant 2, mRNA. XM_906440 XM_919838 XM_919854			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC130209; Fndc6; AV228068; Gm186	MGC130209; Fndc6; AV228068; Gm186
Mus musculus	RefSeq	ILMN_218451	ILMN_218451	IPP	NM_008389.3	NM_008389.3		16351	142368919	NM_008389.3	Ipp	NP_032415.2	ILMN_1237651	006100241	S	1868	GATCACTAGTCGTTGTGAAGGGGGTGTTGCTGTACTGTGACAGAGAAGGC	4	+	116210590-116210629:116210630-116210639	4qD1	Mus musculus IAP promoted placental gene (Ipp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mipp; D4Jhu8	Mipp; D4Jhu8
Mus musculus	RefSeq	ILMN_208755	ILMN_211504	PABPC4	NM_130881.2	NM_130881.2		230721	34419621	NM_130881.2	Pabpc4	NP_570951.2	ILMN_1260325	004210369	S	2739	GGTCTGAAGACATCCTAGTTTGTCTGTGGACCTCCACACCAAGAACCAAG	4	+	122975795-122975844	4qD2.2	Mus musculus poly A binding protein, cytoplasmic 4 (Pabpc4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence ISO]; Interacting selectively with a sequence of cytosine residues in an RNA molecule [goid 17130] [evidence ISO]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [evidence ISO]	MGC6685; MGC11665	MGC6685; MGC11665
Mus musculus	RefSeq	ILMN_211504	ILMN_211504	PABPC4	NM_130881.2	NM_130881.2		230721	34419621	NM_130881.2	Pabpc4	NP_570951.2	ILMN_2616497	004780541	S	273	TTCCTGGGCTGCTGTAACTGTAAACCGCCGGGAGTCCGGGGCCTATATTT	4	+	122960426-122960475	4qD2.2	Mus musculus poly A binding protein, cytoplasmic 4 (Pabpc4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence ISO]; Interacting selectively with a sequence of cytosine residues in an RNA molecule [goid 17130] [evidence ISO]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [evidence ISO]	MGC6685; MGC11665	MGC6685; MGC11665
Mus musculus	Riken	ILMN_203791	ILMN_203791	A230070D14RIK	ri|A230070D14|PX00129A01|AK038871|1070					AK038871	A230070D14Rik		ILMN_2560009	003800593	S	432	CGCCTTCTGTGCTTGTTCCGGAGACTTTCCAGGCCAGGGAGAACTGGGAA										
Mus musculus	MEEBO	ILMN_209831	ILMN_209831	MORF4L2	scl056397.1_158	NM_019768.2			31982707	NM_019768.2	Morf4l2		ILMN_2599618	002190239	S	1550	CTGTAAACAGCCCATCCTCTGCAAGTCCATCTTTGTTGTTCCTTAGGCAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]			
Mus musculus	RefSeq	ILMN_216571	ILMN_216571	CDC5L	NM_152810.1	NM_152810.1		71702	22779898	NM_152810.1	Cdc5l	NP_690023.1	ILMN_2754425	002970452	S	2811	CTGATCTTTGCGTTCCGTGTTATAGACTTGGACTCCAGGATAATGAGGGT	17	-	44855601-44855650	17qB3	Mus musculus cell division cycle 5-like (S. pombe) (Cdc5l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1200002I02Rik; PCDC5RP; AA408004	1200002I02Rik; PCDC5RP; AA408004
Mus musculus	RefSeq	ILMN_216571	ILMN_216571	CDC5L	NM_152810.1	NM_152810.1		71702	22779898	NM_152810.1	Cdc5l	NP_690023.1	ILMN_2799969	003120398	S	2684	CACAGTGGATGCTCTGCCACAGGAGATCGAGTTGCTGGTTTCCTACTCAG	17	-	44855728-44855777	17qB3	Mus musculus cell division cycle 5-like (S. pombe) (Cdc5l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1200002I02Rik; PCDC5RP; AA408004	1200002I02Rik; PCDC5RP; AA408004
Mus musculus	RefSeq	ILMN_216571	ILMN_216571	CDC5L	NM_152810.1	NM_152810.1		71702	22779898	NM_152810.1	Cdc5l	NP_690023.1	ILMN_2672664	007050347	S	28	CACCTGCGGTTTGATTAGTCTCCATCAGTCTTAAGGTTGCAGCCCGGCCG	17	-	44897211-44897260	17qB3	Mus musculus cell division cycle 5-like (S. pombe) (Cdc5l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1200002I02Rik; PCDC5RP; AA408004	1200002I02Rik; PCDC5RP; AA408004
Mus musculus	RefSeq	ILMN_216571	ILMN_216571	CDC5L	NM_152810.1	NM_152810.1		71702	22779898	NM_152810.1	Cdc5l	NP_690023.1	ILMN_2703899	007000132	S	42	TTAGTCTCCATCAGTCTTAAGGTTGCAGCCCGGCCGCCCGCGTCTTTTGC	17	-	44897197-44897246	17qB3	Mus musculus cell division cycle 5-like (S. pombe) (Cdc5l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1200002I02Rik; PCDC5RP; AA408004	1200002I02Rik; PCDC5RP; AA408004
Mus musculus	RefSeq	ILMN_198975	ILMN_198975	LOC270122	XM_195748.1	XM_195748.1			25051247	XM_195748.1	LOC270122		ILMN_2533598	000450474	S	314	CCTGTGACTGCCTGGACATGGACTGCTTGGGATGTTTCTATGCCTGCCCT										
Mus musculus	RefSeq	ILMN_213964	ILMN_213964	ERG	NM_133659.2	NM_133659.2		13876	118130984	NM_133659.2	Erg	NP_598420.1	ILMN_1253014	003830180	S	138	GCCTGCTGAAGGCCATGATCCAGACTGTACCTGACCCAGCAGCTCATATT	16	-	95746136-95746172:95746173-95746185	16qC4	Mus musculus avian erythroblastosis virus E-26 (v-ets) oncogene related (Erg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	D030036I24Rik	D030036I24Rik
Mus musculus	RefSeq	ILMN_213964	ILMN_213964	ERG	NM_133659.2	NM_133659.2		13876	118130984	NM_133659.2	Erg	NP_598420.1	ILMN_1260248	002360673	S	2003	GGCCTAACACACCATGTATGATGTCATTTGAAGGGAAACTACCTGTGTTT	16	-	95582820-95582869	16qC4	Mus musculus avian erythroblastosis virus E-26 (v-ets) oncogene related (Erg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	D030036I24Rik	D030036I24Rik
Mus musculus	MEEBO	ILMN_189490	ILMN_189490	TNFRSF1B	scl0002636.1_12	NM_011610.1			6755826	NM_011610.1	Tnfrsf1b		ILMN_2486186	004290068	S	3	TCTTCCCACGGAAGCCACGGGACCCACGTCAACGTCACCTGCATCGTGAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; Any process that decreases the stability of an RNA molecule, making it more vulnerable to degradative processes [goid 50779] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence IPI]		
Mus musculus	RefSeq	ILMN_213156	ILMN_213156	RAPGEF4	NM_019688.1	NM_019688.1		56508	9790086	NM_019688.1	Rapgef4	NP_062662.1	ILMN_2945940	002450601	S	2827	GTACGGTACTACAGGAGCCAGCCCTTCAATCCGGATGCCGCTCAAGCTAA	2	+	72091024-72091051:72094306-72094327	2qC3	Mus musculus Rap guanine nucleotide exchange factor (GEF) 4 (Rapgef4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IDA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; A series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response [goid 19933] [evidence IDA]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IDA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]	mKIAA4040; 5730402K07Rik; KIAA4040; 6330581N18Rik; Epac2; 1300003D15Rik	mKIAA4040; 5730402K07Rik; KIAA4040; 6330581N18Rik; Epac2; 1300003D15Rik
Mus musculus	RefSeq	ILMN_216100	ILMN_216100	GLO1	NM_025374.2	NM_025374.2		109801	31981281	NM_025374.2	Glo1	NP_079650.2	ILMN_2667352	004560626	S	1783	GCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAG	17	-	30729848-30729897	17qA3.3	Mus musculus glyoxalase 1 (Glo1), mRNA.			Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal [goid 4462] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Glo-1s; Glo1-s; AW550643; GLY1; 1110008E19Rik; 2510049H23Rik; Glo-1; Glo-1r; Qglo; Glo1-r; 0610009E22Rik	Glo-1s; Glo1-s; AW550643; GLY1; 1110008E19Rik; 2510049H23Rik; Glo-1; Glo-1r; Qglo; Glo1-r; 0610009E22Rik
Mus musculus	Riken	ILMN_206997	ILMN_206997	TAF15	ri|6430508C05|PX00648G15|AK078205|871					AK078205	Taf15		ILMN_1225857	002120553	S	545	CCATTCACAAAGGGAAAACTACAGCCCCCACACACAAGATGACCGTCGTG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]			
Mus musculus	RefSeq	ILMN_214032	ILMN_214032	ACTR5	NM_175419.4	NM_175419.4		109275	91176334	NM_175419.4	Actr5	NP_780628.3	ILMN_2651496	001070093	S	1670	CCAAAGGCCATTCAGGACACCCTGGTTCAGAACGTTTTCCTTACCGGTGG	2	+	158462408-158462457	2qH1	Mus musculus ARP5 actin-related protein 5 homolog (yeast) (Actr5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B430109J19Rik; AA545173	B430109J19Rik; AA545173
Mus musculus	RefSeq	ILMN_214032	ILMN_214032	ACTR5	NM_175419.4	NM_175419.4		109275	91176334	NM_175419.4	Actr5	NP_780628.3	ILMN_1213287	004010431	S	1469	CCTTTGTTCTCGGAGGAAACGCCCGAAGTGGAGAAGCCGCAAGTCACCAC	2	+	158461106-158461155	2qH1	Mus musculus ARP5 actin-related protein 5 homolog (yeast) (Actr5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B430109J19Rik; AA545173	B430109J19Rik; AA545173
Mus musculus	Riken	ILMN_206165	ILMN_206165	D030041G16RIK	ri|D030041G16|PX00180E10|AK083530|1159					AK083530	D030041G16Rik		ILMN_2578056	004060189	S	546	GAGATCACGTACTATTCCTGTTTTCAAACACGTGGTTGGGTGGTGTCAGG										
Mus musculus	RefSeq	ILMN_250038	ILMN_250038	OLFR609	NM_147082.1	NM_147082.1		259086	22128802	NM_147082.1	Olfr609	NP_667293.1	ILMN_2802733	005560064	S	881	AGACCAAGCAGATCCGACAGAGGATTTGGTGCATCTTCCGGTGTGGTGGA	7	-	110640460-110640509	7qE3	Mus musculus olfactory receptor 609 (Olfr609), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR9-1; MGC157598	MOR9-1; MGC157598
Mus musculus	Riken	ILMN_207250	ILMN_207250	2810003O05RIK	ri|F830029G04|PL00006J19|AK089825|3112					AK089825	2810003O05Rik		ILMN_1220311	005860168	S	2728	CTGTCAATCCAGGGGGGATTTCACTTGGCCACATGCTCCTGGTCCATCAC										
Mus musculus	RefSeq	ILMN_201565	ILMN_201565	OLFR944	NM_146507.1	NM_146507.1		258500	33239219	NM_146507.1	Olfr944	NP_666718.1	ILMN_2710431	001990300	S	586	GAAATATTGATTCTAGTTATTGCTACACTGAATGTCTTTATCCCAGTGAT	9	+	39025529-39025578	9qA5.1	Mus musculus olfactory receptor 944 (Olfr944), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR171-19	MOR171-19
Mus musculus	RefSeq	ILMN_232955	ILMN_232955	SLC1A2	NM_001077515.1	NM_001077515.1		20511	117606274	NM_001077515.1	Slc1a2	NP_001070983.1	ILMN_3076439	002760161	I	1868	GAGGCATAGAGGAGCTGTGTACACCCGTGATGATAGGCACCGTGCTGTGT	2	+	102621822-102621871	2qE2	Mus musculus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (Slc1a2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IDA]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups [goid 43200] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glutamate(out) + Na+(out) = glutamate(in) + Na+(in) [goid 15501] [evidence IDA]	GLT-1; Eaat2; MGLT1; 1700091C19Rik; GLT1	GLT-1; Eaat2; MGLT1; 1700091C19Rik; GLT1
Mus musculus	RefSeq	ILMN_217162	ILMN_217162	KRT75	NM_133357.3	NM_133357.3		109052	146149086	NM_133357.3	Krt75	NP_579935.1	ILMN_1251492	005810142	S	718	CACAGCTGAAAGAGGCAGACTGGATGCTGAACTGAGGAACATGCAGGAGG				15qF2	Mus musculus keratin 75 (Krt75), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krtcap1; Krt2-6hf; 4732468K03Rik; AA589387	Krtcap1; Krt2-6hf; 4732468K03Rik; AA589387
Mus musculus	RefSeq	ILMN_217162	ILMN_217162	KRT75	NM_133357.3	NM_133357.3		109052	146149086	NM_133357.3	Krt75	NP_579935.1	ILMN_2679759	005810370	S	2800	GTGTTTGGTCAGGGTGGGCTTGTCACATAGGATTACTGATAGGAGCTGCC				15qF2	Mus musculus keratin 75 (Krt75), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krtcap1; Krt2-6hf; 4732468K03Rik; AA589387	Krtcap1; Krt2-6hf; 4732468K03Rik; AA589387
Mus musculus	RefSeq	ILMN_186643	ILMN_231479	LOC665446	XM_977005.1	XM_977005.1		665446	94377293	XM_977005.1	LOC665446	XP_982099.1	ILMN_1257496	005700392	S	39	CCTAGGAACAGGCCTTGTGGACATGAAAGTAACCCAGATGCCAAGATACC	6	+	41201048-41201058:41201194-41201232		PREDICTED: Mus musculus similar to T-cell receptor beta chain V region PHDS203 precursor (LOC665446), mRNA.					
Mus musculus	RefSeq	ILMN_200593	ILMN_231479	LOC665446	XM_977005.1	XM_977005.1		665446	94377293	XM_977005.1	LOC665446	XP_982099.1	ILMN_2539306	001030192	S	191	TGATTTATATCTCATACGATGTTGATAGTAACAGCGAAGGAGACATCCCT	6	+	41201335-41201384		PREDICTED: Mus musculus similar to T-cell receptor beta chain V region PHDS203 precursor (LOC665446), mRNA.					
Mus musculus	RefSeq	ILMN_211244	ILMN_211244	STAT4	NM_011487.3	NM_011487.3		20849	146134366	NM_011487.3	Stat4	NP_035617.1	ILMN_2614970	007100040	S	1833	CTGTCGTGATGATTTCTAATGTCAGCCAACTACCTAATGCATGGGCATCC				1qC1.1	Mus musculus signal transducer and activator of transcription 4 (Stat4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211244	ILMN_211244	STAT4	NM_011487.3	NM_011487.3		20849	146134366	NM_011487.3	Stat4	NP_035617.1	ILMN_1236059	005560066	S	2611	GGAGCCACAATCTCCTTCAGACCTTCTCCCCATGTCTCCAAGTGCATATG				1qC1.1	Mus musculus signal transducer and activator of transcription 4 (Stat4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215597	ILMN_215597	RAMP2	NM_019444.2	NM_019444.2		54409	71361672	NM_019444.2	Ramp2	NP_062317.1	ILMN_2661422	001690035	S	787	GACCTGTGGATTGGTGGAAATGGCAGCAAAGGGGACTCACGACACAATGT	11	+	101109479-101109528	11qD	Mus musculus receptor (calcitonin) activity modifying protein 2 (Ramp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IPI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA];  [goid 15027] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217651	ILMN_217651	CHRNB1	NM_009601.3	NM_009601.3		11443	31981911	NM_009601.3	Chrnb1	NP_033731.2	ILMN_2685921	004070253	S	1644	TTGTTTCTGGGAAGACGTTCAAGTGAGACTTGGAGGCTGAGCATGGTGCC	11	-	69597999-69598048	11qB3	Mus musculus cholinergic receptor, nicotinic, beta polypeptide 1 (muscle) (Chrnb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IGI]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [evidence IMP];  [goid 4889] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Acrb; Achr-2	Acrb; Achr-2
Mus musculus	RefSeq	ILMN_217651	ILMN_217651	CHRNB1	NM_009601.3	NM_009601.3		11443	31981911	NM_009601.3	Chrnb1	NP_033731.2	ILMN_3001481	000670554	S	2001	GATCTGTTGGCTACTGAATTATCCCCAGCAATGTGTACAGGTCCTAGCCC	11	-	69597642-69597691	11qB3	Mus musculus cholinergic receptor, nicotinic, beta polypeptide 1 (muscle) (Chrnb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IGI]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [evidence IMP];  [goid 4889] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Acrb; Achr-2	Acrb; Achr-2
Mus musculus	Riken	ILMN_204353	ILMN_204353	B830006A16RIK	ri|B830006A16|PX00072D22|AK046785|2577					AK046785	B830006A16Rik		ILMN_1256243	000130243	S	2316	GTAGCTCATGAAAGAAGCAGACTGTTGGTGGCTCTAAGGCATGTTCTAGG										
Mus musculus	Riken	ILMN_204575	ILMN_204575	C130023I09RIK	ri|C130023I09|PX00168E12|AK047956|1729					AK047956	C130023I09Rik		ILMN_1232151	005690138	S	1398	CTTCAGTGCTGGGGAGAGGAGGTGCGGACAGGCAAATCTGTGGGGTTTAC										
Mus musculus	RefSeq	ILMN_209442	ILMN_209442	CLSTN3	NM_153508.3	NM_153508.3		232370	141803023	NM_153508.3	Clstn3	NP_705728.1	ILMN_1229310	004920576	S	3194	GAAGAGAGACCGAGGGGGGAGAAAGAGCTCTTCATTTGGAGCAGTCCTTC	6	-	124381477-124381526	6qF2	Mus musculus calsyntenin 3 (Clstn3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cst-3; mKIAA0726; Cs3; CSTN3	Cst-3; mKIAA0726; Cs3; CSTN3
Mus musculus	Riken	ILMN_205260	ILMN_205260	SPAG6	ri|E230028C21|PX00210P09|AK054199|2083					AK054199	Spag6		ILMN_2571204	005090474	S	1511	CCTGTCAATTTGTTGCTTTCCCATTTGCTTCTGTAAGTGGGGCTGTGGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_210215	ILMN_210215	ATP11C	scl54205.32.1_100	XM_135900.3			38086319	XM_135900.3	Atp11c		ILMN_2719456	004850288	S	1896	GGAACGTAATGCAATGGATGGGTATCGGACTCTTTGTGTAGCCTTCAAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212137	ILMN_212137	CLDN8	NM_018778.2	NM_018778.2		54420	31542405	NM_018778.2	Cldn8	NP_061248.1	ILMN_2681236	006250066	S	2038	CTTTTGTAATGTATGATTTAAAATCCACGTACTTTATAATGACCTCACAT	16	-	88561293-88561342	16qC3.3	Mus musculus claudin 8 (Cldn8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AI648025	AI648025
Mus musculus	RefSeq	ILMN_212137	ILMN_212137	CLDN8	NM_018778.2	NM_018778.2		54420	31542405	NM_018778.2	Cldn8	NP_061248.1	ILMN_2623145	003780575	S	910	CAGCGTCTATGTTTCCATAAGTGATTTTAGCAGAATGAGGTATTATGTGC	16	-	88562421-88562470	16qC3.3	Mus musculus claudin 8 (Cldn8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AI648025	AI648025
Mus musculus	Riken	ILMN_205157	ILMN_205157	A630025O09RIK	ri|A630025O09|PX00144L23|AK041629|4492					AK041629	A630025O09Rik		ILMN_2570419	000430047	S	3535	GAACCCTTTCAGCCAGCAGCTCAGTTAGAGGAAACCCATCCCCAGCACTG										
Mus musculus	Riken	ILMN_205003	ILMN_205003	9630011P09RIK	ri|9630011P09|PX00114H20|AK035861|2506					AK035861	9630011P09Rik		ILMN_2569258	002680187	S	1931	CCTGGTGGATTTTTGGGTGGTATGCATAGAATATGTGACACCTTGGTTCC										
Mus musculus	RefSeq	ILMN_221983	ILMN_221983	6530403A03RIK	NM_026382.2	NM_026382.2		67797	71067103	NM_026382.2	6530403A03Rik	NP_080658.2	ILMN_2743020	005570048	S	670	GGCAGAAGTGAGAGATTATAAAAGAAGACGCCAGTCCTACAGAGCTAAGA	13	+	38309283-38309332	13qA3.3	Mus musculus RIKEN cDNA 6530403A03 gene (6530403A03Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		C6orf151; 1110050F08Rik	C6orf151; 1110050F08Rik
Mus musculus	RefSeq	ILMN_201650	ILMN_221983	6530403A03RIK	NM_026382.2	NM_026382.2		67797	71067103	NM_026382.2	6530403A03Rik	NP_080658.2	ILMN_1241380	000610204	S	1669	GGGAAAGGATTTTTTGGGGTACATAACAGGGTTAGGGGGTTGGTCAAAGG	13	+	38319412-38319461	13qA3.3	Mus musculus RIKEN cDNA 6530403A03 gene (6530403A03Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		C6orf151; 1110050F08Rik	C6orf151; 1110050F08Rik
Mus musculus	MEEBO	ILMN_212011	ILMN_212011	GAD1	scl0003045.1_120	NM_008077.2			31982846	NM_008077.2	Gad1		ILMN_2621743	000830437	S	3027	TCTCTGTGACTCGCTTAGCTGAAACCTAAGGCAATGTTTCTGAAGACCTC						The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2 [goid 4351] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211005	ILMN_211005	BCAP31	NM_012060.4	NM_012060.4		27061	146134508	NM_012060.4	Bcap31	NP_036190.2	ILMN_2611501	001500274	S	638	AGAACAAGAGCCTGAAGAATGACCTGAGGAAGCTAAAAGATGAGCTGGCC				XqA7.3	Mus musculus B-cell receptor-associated protein 31 (Bcap31), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IPI]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IPI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Bap31	Bap31
Mus musculus	RefSeq	ILMN_187194	ILMN_239185	RPRD1A	NM_144861.2	NM_144861.2		225283	68051718	NM_144861.2	Rprd1a	NP_659110.1	ILMN_1239180	002850347	S	3975	CCTTCCTCAGTCCCCACTCTGAAGTCATGCAAAAGCCCGACACTAGCTAT	18	-	24643735-24643784	18qA2	Mus musculus regulation of nuclear pre-mRNA domain containing 1A (Rprd1a), mRNA.				mKIAA4077; MGC29396; KIAA4077; MGC36325	mKIAA4077; MGC29396; KIAA4077; MGC36325
Mus musculus	RefSeq	ILMN_224222	ILMN_239185	RPRD1A	NM_144861.2	NM_144861.2		225283	68051718	NM_144861.2	Rprd1a	NP_659110.1	ILMN_2776876	000060360	S	860	CCCGAATGTTAGCAGATTTTCTTCGTTGTCAAAAGGAAGCCCTTGCAGAG	18	-	24665352-24665401	18qA2	Mus musculus regulation of nuclear pre-mRNA domain containing 1A (Rprd1a), mRNA.				mKIAA4077; MGC29396; KIAA4077; MGC36325	mKIAA4077; MGC29396; KIAA4077; MGC36325
Mus musculus	RefSeq	ILMN_207534	ILMN_257192	IFT140	NM_134126.2	NM_134126.2		106633	84993725	NM_134126.2	Ift140	NP_598887.2	ILMN_1260493	005290204	I	4932	TGAGCTGCACTTGGTGGCTGGGGACTCTTGTTACTGTTAACTGTGCCTGG	17	+	25236207-25236256	17qA3.3	Mus musculus intraflagellar transport 140 homolog (Chlamydomonas) (Ift140), mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]			AI661311; mKIAA0590; Wdtc2	AI661311; mKIAA0590; Wdtc2
Mus musculus	RefSeq	ILMN_257192	ILMN_257192	IFT140	NM_134126.2	NM_134126.2		106633	84993725	NM_134126.2	Ift140	NP_598887.2	ILMN_3137478	004180411	A	1501	TCTTTCCTGTCCACGGGGGGCACACACAGCCTGCACACCGACATGCACAT	17	+	25172780-25172829	17qA3.3	Mus musculus intraflagellar transport 140 homolog (Chlamydomonas) (Ift140), mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]			AI661311; mKIAA0590; Wdtc2	AI661311; mKIAA0590; Wdtc2
Mus musculus	RefSeq	ILMN_257192	ILMN_257192	IFT140	NM_134126.2	NM_134126.2		106633	84993725	NM_134126.2	Ift140	NP_598887.2	ILMN_3060168	006350161	I	4998	GTCCCCTGAAAATCCCAGTGCCCCTTGAGACCACAGCAAAGACCACCTGG	17	+	25236273-25236322	17qA3.3	Mus musculus intraflagellar transport 140 homolog (Chlamydomonas) (Ift140), mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]			AI661311; mKIAA0590; Wdtc2	AI661311; mKIAA0590; Wdtc2
Mus musculus	RefSeq	ILMN_222707	ILMN_253754	OLFR813	NM_207147.1	NM_207147.1		258252	46391054	NM_207147.1	Olfr813	NP_997030.1	ILMN_2753726	006860424	S	611	CGCTTATGACCACCCTGATGCTGATAATTCTTTCTTACATATGCATTCTC	10	+	129294186-129294235	10qD3	Mus musculus olfactory receptor 813 (Olfr813), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR108-3; MGC157500	MOR108-3; MGC157500
Mus musculus	RefSeq	ILMN_210116	ILMN_210116	NR1D2	NM_011584.2	NM_011584.2		353187	31543337	NM_011584.2	Nr1d2	NP_035714.2	ILMN_2798993	001260039	S	4256	TGAGAGGATTCCAGCTTCTAGAGAGTGAACACTGAGGGAAAGGAGAGACA	14	-	16997345-16997394	14qA2	Mus musculus nuclear receptor subfamily 1, group D, member 2 (Nr1d2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with thyroid hormone to initiate a change in cell activity [goid 4887] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	RVR; Rev-erb	RVR; Rev-erb
Mus musculus	MEEBO	ILMN_196043	ILMN_196043	DHCR24	scl25177.9.1_28				16716608	NM_053272	Dhcr24		ILMN_2620106	006370681	S	1213	CCTGCATACCTTCCAAAATGACATCCACGTCTACCCCATCTGGCTGTGCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence ISO]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16125] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; The process whereby plasminogen is processed to plasmin. This process includes both the cleavage of plasminogen between Arg560-Val561 to form plasmin and cleavage at Arg310 by plasmin or trypsin to result in the final two-chain form of plasmin held together by disulfide bonds [goid 31639] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces NAD or NADP [goid 16628] [evidence ISO]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217050	ILMN_217050	LYPLA1	NM_008866.2	NM_008866.2		18777	31543132	NM_008866.2	Lypla1	NP_032892.1	ILMN_2678547	006560543	S	401	ACACTGCTCTCACCACACAGCAGAAACTGGCTGGTGTCACTGCACTCAGT	1	+	4829487-4829536	1qA1	Mus musculus lysophospholipase 1 (Lypla1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Pla1a	Pla1a
Mus musculus	RefSeq	ILMN_217050	ILMN_217050	LYPLA1	NM_008866.2	NM_008866.2		18777	31543132	NM_008866.2	Lypla1	NP_032892.1	ILMN_2734520	006110707	S	2176	AACAGGTGCTAATTGATATGAAGATCATTTTGGTATGTCCTAGATAGAAT	1	+	4836559-4836608	1qA1	Mus musculus lysophospholipase 1 (Lypla1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Pla1a	Pla1a
Mus musculus	RefSeq	ILMN_217050	ILMN_217050	LYPLA1	NM_008866.2	NM_008866.2		18777	31543132	NM_008866.2	Lypla1	NP_032892.1	ILMN_2873319	004890603	S	2346	ATTCCATTGACTGTGTGCTGTAATGTGGGAAAATGTCATGTTTTTCACAG	1	+	4836729-4836778	1qA1	Mus musculus lysophospholipase 1 (Lypla1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Pla1a	Pla1a
Mus musculus	MEEBO	ILMN_195510	ILMN_195510	TCRB-V8.2	scl021607.1_30						Tcrb-V8.2		ILMN_2516221	007210037	S	7	ACTTCTCCCTCATTCTGGAGTTGGCTACCCCCTCTCAGACATCAGTGTAC										
Mus musculus	Riken	ILMN_202300	ILMN_202300	4933426E21RIK	ri|4933426E21|PX00020P16|AK016928|1954					AK016928	4933426E21Rik		ILMN_1232713	004860543	S	1833	TTCAGGTCTACATTGCGCTTCCCATGTTGCGGCTGATGCACTGCAAGACC										
Mus musculus	RefSeq	ILMN_228283	ILMN_228283	SLC35A3	NM_144902.3	NM_144902.3		229782	118130067	NM_144902.3	Slc35a3	NP_659151.1	ILMN_2974069	006270601	S	3794	AAGGTTAGGTACAGCACACTGGGAGAAAGCTTCATGTCCCGGGCAGGCCC	3	-	116373899-116373948	3qG1	Mus musculus solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3 (Slc35a3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]	2310050P13Rik; MGC36317	2310050P13Rik; MGC36317
Mus musculus	RefSeq	ILMN_216625	ILMN_310136	LOC100045284	XM_001473961.1	XM_001473961.1		100045284	149253425	XM_001473961.1	LOC100045284	XP_001474011.1	ILMN_2673355	002070113	S	3111	GTGTCCTGAGATCCTGTGAAGATATTACAGCCAATGTGTGCACTGTCAGC					PREDICTED: Mus musculus similar to G protein-coupled receptor 157 (LOC100045284), mRNA.					
Mus musculus	RefSeq	ILMN_222419	ILMN_222419	ITIH1	NM_008406.3	NM_008406.3		16424	142385310	NM_008406.3	Itih1	NP_032432.2	ILMN_2749317	003180554	S	2843	TGGTCCCTGTGTCAAGACATCCTGTGATCTCATTAAAGAGAGGCTGTGTC	14	-	31742550-31742599	14qB	Mus musculus inter-alpha trypsin inhibitor, heavy chain 1 (Itih1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Itih-1; Intin1	Itih-1; Intin1
Mus musculus	RefSeq	ILMN_224860	ILMN_224860	WFDC15B	NM_138685.2	NM_138685.2		192201	113930763	NM_138685.2	Wfdc15b	NP_619626.1	ILMN_3141801	000110292	A	364	GGACGCCCTGAAGTGTTGCTTCTTCTACTGCCAGATGCGCTGTGTGGATC	2	-	164040869-164040918	2qH3	Mus musculus WAP four-disulfide core domain 15B (Wfdc15b), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	SWAM1; 9230106L14Rik; Wfdc15	SWAM1; 9230106L14Rik; Wfdc15
Mus musculus	RefSeq	ILMN_224223	ILMN_224860	WFDC15B	NM_138685.2	NM_138685.2		192201	113930763	NM_138685.2	Wfdc15b	NP_619626.1	ILMN_1259467	002600017	S	492	CCTCCTCCGAGAGGCCCATCCTGAAACTAAAGATTAAGTGCTTGTTAATA	2	-	164040222-164040271	2qH3	Mus musculus WAP four-disulfide core domain 15B (Wfdc15b), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	SWAM1; 9230106L14Rik; Wfdc15	SWAM1; 9230106L14Rik; Wfdc15
Mus musculus	RefSeq	ILMN_191820	ILMN_191820	TRIM16	NM_053169.2	NM_053169.2		94092	70778827	NM_053169.2	Trim16	NP_444399.2	ILMN_2482494	007550520	S	1553	TTGGCCTGACCTGCAAAGGCATTGACCGTAAGGGGGAAGAACGGAACAGC	11	+	62654107-62654156	11qB2	Mus musculus tripartite motif-containing 16 (Trim16), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9130006M08Rik; EBBP; AI482483	9130006M08Rik; EBBP; AI482483
Mus musculus	MEEBO	ILMN_212527	ILMN_212527	MCM7	scl017220.2_24	NM_008568.1			10242372	NM_008568.1	Mcm7		ILMN_2673889	006280176	S	58	GAGAGATTTTTGAGCCCTTCAAGTCCTGCCACACCGTCCCCGGCAGCGAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218901	ILMN_218901	PERP	NM_022032.3	NM_022032.3		64058	146135005	NM_022032.3	Perp	NP_071315.1	ILMN_1256476	005390707	S	1801	CGAGCTTGTTTTAACTATCAGAACACTATTTTGTAAGGTGCTGCAAAGAC				10qA3	Mus musculus PERP, TP53 apoptosis effector (Perp), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	THW; PIGPC1; 1110017A08Rik; KRTCAP1; KCP1	THW; PIGPC1; 1110017A08Rik; KRTCAP1; KCP1
Mus musculus	Riken	ILMN_202907	ILMN_202907	9030018K07RIK	ri|9030018K07|PX00049N22|AK033420|2792					AK033420	9030018K07Rik		ILMN_1212667	004230504	S	2519	GGGCGTGATGCAGGGCAGAAAGGAGAGAGAGAGAACCAACTCCCGAACCT										
Mus musculus	RefSeq	ILMN_221106	ILMN_221106	SYCE2	NM_027954.2	NM_027954.2		71846	142366155	NM_027954.2	Syce2	NP_082230.1	ILMN_2731135	006290707	S	524	CCATCTGGAAATGGAGCTTAAACAAGTCTGCCAAACTGTGGAAACGGTGT	8	+	87409947-87409996	8qC3	Mus musculus synaptonemal complex central element protein 2 (Syce2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence ISS]; A structural unit of the synaptonemal complex found between the lateral elements [goid 801] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IC ]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through prophase of meiosis I; divided into several stages [goid 7128] [evidence IC ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700013H19Rik; Cesc1; AA407907	1700013H19Rik; Cesc1; AA407907
Mus musculus	RefSeq	ILMN_196483	ILMN_224716	MOSPD4	XM_911180.3	XM_911180.3		72076	149270064	XM_911180.3	Mospd4	XP_916273.3	ILMN_1242682	007400196	S	280	GCGGCCCCAGCAAGGAGGTCAAGCACAAGTTCATGGTGCAGACAGTGTTT				18qC	PREDICTED: Mus musculus motile sperm domain containing 4 (Mospd4), mRNA.					
Mus musculus	RefSeq	ILMN_196483	ILMN_224716	MOSPD4	XM_911180.3	XM_911180.3		72076	149270064	XM_911180.3	Mospd4	XP_916273.3	ILMN_1218764	002630296	S	733	AGTCACATAGGCTTCTTCACCCCTAATGATCTCTTGTGATTGGAGGACGC				18qC	PREDICTED: Mus musculus motile sperm domain containing 4 (Mospd4), mRNA.					
Mus musculus	RefSeq	ILMN_216124	ILMN_255751	COPG2	NM_017478.2	NM_017478.2		54160	31982716	NM_017478.2	Copg2	NP_059506.1	ILMN_2667618	001690020	S	2145	CCTCCCTTACAATCAGCCAGGAATATGCTACACACTTGTTCGATTGCCAG	6	-	30759576-30759625	6qA3.3	Mus musculus coatomer protein complex, subunit gamma 2 (Copg2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW227625	AW227625
Mus musculus	RefSeq	ILMN_205702	ILMN_330188	B430212C06RIK	XM_001472323.1	XM_001472323.1		338360	149270182	XM_001472323.1	B430212C06Rik	XP_001472373.1	ILMN_1258660	000150086	S	509	AACTCTCCGTCCCAGCACAGAAGCTTTGGGTGTGGCCCCATGTAGGGACA	18	-	67483896-67483945	18qE1	PREDICTED: Mus musculus RIKEN cDNA B430212C06 gene (B430212C06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209017	ILMN_209017	TMEM49	NM_029478.3	NM_029478.3		75909	142367994	NM_029478.3	Tmem49	NP_083754.2	ILMN_2767635	003360520	S	1489	ATTTGTTAAGGTAAGGTGTCTACACCCTCAGTTCAATCCACGTCGTATTC	11	-	86398601-86398650	11qC	Mus musculus transmembrane protein 49 (Tmem49), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			ni-2; 4930579A11Rik; 3110098I04Rik; AI787464	ni-2; 4930579A11Rik; 3110098I04Rik; AI787464
Mus musculus	RefSeq	ILMN_209017	ILMN_209017	TMEM49	NM_029478.3	NM_029478.3		75909	142367994	NM_029478.3	Tmem49	NP_083754.2	ILMN_2591777	006480458	S	2453	CCTGTCGTGGTCGTGACATCGCATGGCTGTACCACCTTGTCGGATAGCTT	11	-	86397637-86397686	11qC	Mus musculus transmembrane protein 49 (Tmem49), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			ni-2; 4930579A11Rik; 3110098I04Rik; AI787464	ni-2; 4930579A11Rik; 3110098I04Rik; AI787464
Mus musculus	RefSeq	ILMN_209017	ILMN_209017	TMEM49	NM_029478.3	NM_029478.3		75909	142367994	NM_029478.3	Tmem49	NP_083754.2	ILMN_2616768	005690327	S	354	TTTTACTGCTGCTTGCTGCGCTTGTAGCTACGTATTATGTGGAAGGAGCG	11	-	86476993-86477042	11qC	Mus musculus transmembrane protein 49 (Tmem49), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			ni-2; 4930579A11Rik; 3110098I04Rik; AI787464	ni-2; 4930579A11Rik; 3110098I04Rik; AI787464
Mus musculus	RefSeq	ILMN_212824	ILMN_241732	TCEAL5	NM_177919.1	NM_177919.1		331532	46559433	NM_177919.1	Tceal5	NP_808587.1	ILMN_2630772	007610767	S	876	CTTGTGCCGAGATTTTCCTTTAGGTGTCACTCCTGTTACCAGCAGACAGC	X	-	132735582-132735631	XqF1	Mus musculus transcription elongation factor A (SII)-like 5 (Tceal5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	6430401A05Rik	6430401A05Rik
Mus musculus	RefSeq	ILMN_209851	ILMN_209851	PLEC1	NM_201388.1	NM_201388.1		18810	41322928	NM_201388.1	Plec1	NP_958790.1	ILMN_2599783	003370128	S	79	GACTTGGTCAACTTAGTTACTGTAAGGGCACCCTCGTGGGACTGGGCAGA	15	-	76038555-76038604	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; PLTN; AA591047; PCN; AU042537	EBS1; PLTN; AA591047; PCN; AU042537
Mus musculus	RefSeq	ILMN_236062	ILMN_236062	BBS12	NM_001008502.2	NM_001008502.2		241950	144922639	NM_001008502.2	Bbs12	NP_001008502.2	ILMN_3160683	004290543	S	2215	ACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGATCCCCTG	3	+	37217567-37217585:37215488-37215497:37215498-37215518	3qB	Mus musculus Bardet-Biedl syndrome 12 (human) (Bbs12), mRNA.				Gm407; MGC102209; Gm721; Gm1805	Gm407; MGC102209; Gm721; Gm1805
Mus musculus	RefSeq	ILMN_207517	ILMN_236062	BBS12	NM_001008502.2	NM_001008502.2		241950	144922639	NM_001008502.2	Bbs12	NP_001008502.2	ILMN_1260603	007100400	I	381	GTCGGTAATGTCAGAAGGCTTGAACTCTTGCATTGAAGCAGTAGTTTCTC	3	+	37215733-37215782	3qB	Mus musculus Bardet-Biedl syndrome 12 (human) (Bbs12), mRNA.				Gm407; MGC102209; Gm721; Gm1805	Gm407; MGC102209; Gm721; Gm1805
Mus musculus	MEEBO	ILMN_211583	ILMN_211583	GRIN2B	scl28288.16.1_255	NM_008171.2			41680709	NM_008171.2	Grin2b		ILMN_2617352	001090487	S	4308	CCAGGTCGTTTCCAGAAGGACATTTGTATAGGGAACCAGTCCAACCCCTG						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD [goid 17146] [evidence IPI]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IDA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IDA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Any process that modulates the establishment or extent of the postsynaptic membrane potential, which is generated by changes in the membrane potential of the post synaptic neuron that receives information at a synapse. The presynaptic neuron releases neurotransmitters into the synaptic cleft which bind to receptors on the postsynaptic neuron. After being bound by the neurotransmitters, these receptors can open or close an ion channel, allowing ions to enter or leave the cell and therefore altering the membrane potential of the postsynaptic neuron [goid 60078] [evidence IMP]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence TAS]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IGI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IGI]; The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure [goid 7423] [evidence IMP]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IMP]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IGI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_201771	ILMN_201771	2500002A22RIK	ri|2500002A22|ZX00052J20|AK010848|829					AK010848	2500002A22Rik		ILMN_1255902	005490767	S	231	GAGCGCTGCACCCGCAAAGCCTCCAGGGTGAAGTTGAACAGATTGCTATG										
Mus musculus	Riken	ILMN_205920	ILMN_205920	NPC1	ri|B130009M10|PX00157I17|AK044878|3387					AK044878	Npc1		ILMN_1252918	000450181	S	3196	CGTCTACTGTGGGGGCTGCAGTGATCGTAGCAGTTAAGTGTGTACACTGC						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IEA]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence IMP]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IMP]	Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_206496	ILMN_206496	D430045C01RIK	ri|D430045C01|PX00195N21|AK085153|2730					AK085153	D430045C01Rik		ILMN_1246035	006480445	S	2451	GATGTGAACAGTGTGCTGTAGGAAGGGAGTGTGAGCAACAGGGTTGGTGG										
Mus musculus	Riken	ILMN_206345	ILMN_206345	D330027L06RIK	ri|D330027L06|PX00192P07|AK084671|2498					AK084671	D330027L06Rik		ILMN_1246015	004480377	S	2356	GGGCCATGCCACATGACTTACAAGGCTCCACACAAAAACCATCGTGGAAG										
Mus musculus	RefSeq	ILMN_223021	ILMN_223021	SORD	NM_146126.1	NM_146126.1		20322	22128626	NM_146126.1	Sord	NP_666238.1	ILMN_2758198	005720014	S	1835	ATCTTAAATCCTGCCTAGAGGGCCACAGGAGGGCTTGCCCCACTCAGAGG	2	+	121956354-121956403	2qE5	Mus musculus sorbitol dehydrogenase (Sord), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group [goid 6060] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-iditol + NAD+ = L-sorbose + NADH + H+ [goid 3939] [evidence IDA]	Sodh-1; MGC31355; Sdh-1; Sdh1	Sodh-1; MGC31355; Sdh-1; Sdh1
Mus musculus	RefSeq	ILMN_220025	ILMN_220025	LGALS9	NM_010708.1	NM_010708.1		16859	6754535	NM_010708.1	Lgals9	NP_034838.1	ILMN_2752873	000430132	S	998	ACCACCGCCTGAAGAACTTGCAGGATATCAACACTCTAGAAGTGGCGGGT	11	-	78776926-78776975	11qB5	Mus musculus lectin, galactose binding, soluble 9 (Lgals9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	AI194909; AI265545; galectin-9; AA407335	AI194909; AI265545; galectin-9; AA407335
Mus musculus	RefSeq	ILMN_220025	ILMN_220025	LGALS9	NM_010708.1	NM_010708.1		16859	6754535	NM_010708.1	Lgals9	NP_034838.1	ILMN_2716602	005390131	S	806	TCCACCTGAACCCCCGTTTCAATGAGAATGCTGTTGTCCGAAACACTCAG	11	-	78779268-78779317	11qB5	Mus musculus lectin, galactose binding, soluble 9 (Lgals9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	AI194909; AI265545; galectin-9; AA407335	AI194909; AI265545; galectin-9; AA407335
Mus musculus	RefSeq	ILMN_220025	ILMN_220025	LGALS9	NM_010708.1	NM_010708.1		16859	6754535	NM_010708.1	Lgals9	NP_034838.1	ILMN_2778043	002350537	S	485	TCTCCACAGTGCAGTTCTCTCAGCCAGTCCAGTTCCCACGGACCCCTAAG	11	-	78783230-78783279	11qB5	Mus musculus lectin, galactose binding, soluble 9 (Lgals9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	AI194909; AI265545; galectin-9; AA407335	AI194909; AI265545; galectin-9; AA407335
Mus musculus	RefSeq	ILMN_211533	ILMN_243036	SLC39A9	XM_891220.2	XM_891220.2		328133	94392986	XM_891220.2	Slc39a9	XP_896313.2	ILMN_2616772	001450564	S	1168	GCAGCAGCCTCTACTTCACAAACTAGTGTCCAGTTAATTGTGTTCGTGGC	12	+	81776856-81776905	12qD1	PREDICTED: Mus musculus solute carrier family 39 (zinc transporter), member 9, transcript variant 2 (Slc39a9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210761	ILMN_210761	CCDC83	NM_029256.1	NM_029256.1		75338	21312933	NM_029256.1	Ccdc83	NP_083532.1	ILMN_2848122	002230553	S	1410	ATACGTTGAAACTCTGTTCATGATCTGTGTCCTTAATACACAAAGTGGGC	7	-	90111039-90111088	7qE1	Mus musculus coiled-coil domain containing 83 (Ccdc83), mRNA.				4930549K11Rik; 4930554C01Rik; 4932423M01Rik	4930549K11Rik; 4930554C01Rik; 4932423M01Rik
Mus musculus	RefSeq	ILMN_246493	ILMN_246493	TSKU	NM_001024619.1	NM_001024619.1		244152	67972424	NM_001024619.1	Tsku	NP_001019790.1	ILMN_2838564	002030386	S	2039	CACAAGCTCCAAGGGACTTACAAGCTCAAGGGCCAGAGCCCAGAGACCCA	7	-	98226281-98226330	7qE2	Mus musculus tsukushin (Tsku), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Lrrc54; 9530051K01Rik; E2ig4; Tsk	Lrrc54; 9530051K01Rik; E2ig4; Tsk
Mus musculus	RefSeq	ILMN_212947	ILMN_328342	1700008P20RIK	NR_003638.1	NR_003638.1		69301	153791857	NR_003638.1	1700008P20Rik		ILMN_2631903	007160707	S	611	ATGGCGGGCCAGCAGTATGAGGGCATCACCTTCGAGGACTTCGTCAAGAC				7qA3	Mus musculus RIKEN cDNA 1700008P20 gene (1700008P20Rik), non-coding RNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209891	ILMN_209891	EG233164	NM_183166.2	NM_183166.2		233164	139948924	NM_183166.2	EG233164	NP_898989.2	ILMN_2600180	002510170	S	2488	TTTATTTTTATTATATTCTATCCGAACACCTTAAGACATAGTTATTTAAC	7	+	48300308-48300357	7qB3	Mus musculus predicted gene, EG233164 (EG233164), mRNA.				4930549O06	4930549O06
Mus musculus	RefSeq	ILMN_199377	ILMN_200959	DNAHC3	XM_355934.5	XM_355934.5		381917	94380999	XM_355934.5	Dnahc3	XP_355934.5	ILMN_2535036	007000767	S	11701	AAAGTGCCAGCCATGTGGGCAGCCAAGTCCTACCCATCACTGAAGCCCCT	7	-	127069962-127070011	7qF2	PREDICTED: Mus musculus dynein, axonemal, heavy chain 3 (Dnahc3), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	MEEBO	ILMN_212727	ILMN_212727	SLC4A7	scl0218756.18_6	XM_147798.4			38075560	XM_147798.4	Slc4a7		ILMN_2629601	006590154	S	3788	TCGTGAACAGCGGGTTACAGGGCTGATGATTTTTATCCTGATGGGCCTCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 5452] [evidence IEA];  [goid 15380] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193442	ILMN_193442	C230037E05RIK	scl30422.1.1_0						C230037E05Rik		ILMN_2497226	002650437	S	5	TGCCTGCTGACTCAGTTTCTCCCGAAGTCCATGAGGTCTGCCATGTGACT										
Mus musculus	RefSeq	ILMN_199772	ILMN_199772	LOC383918	XM_357324.1	XM_357324.1			38077087	XM_357324.1	LOC383918		ILMN_1219901	006860110	S	2	TGAACAGGGAGAGTCGTTGCTGTGCACATTTGGATGGTGGACTTGACCTC										
Mus musculus	RefSeq	ILMN_212973	ILMN_312334	LOC100047200	XM_001477632.1	XM_001477632.1		100047200	149254354	XM_001477632.1	LOC100047200	XP_001477682.1	ILMN_1247220	006510162	S	4788	CTTGCGGAGGCCACCATAGAACCGTCCTAATTTTTCATAGACTCTGGCAT					PREDICTED: Mus musculus similar to T-box 3 protein (LOC100047200), mRNA.					
Mus musculus	Riken	ILMN_206102	ILMN_206102	1110050B14RIK	ri|1110050B14|ZA00008K15|AK027969|448					AK027969	1110050B14Rik		ILMN_2577567	000650360	S	385	GCCATCTTGCTGGATCTCTATAAATTTGACCGCTCTGGCTAGCGCCTGGG										
Mus musculus	RefSeq	ILMN_223694	ILMN_223694	NDUFAF1	NM_027175.3	NM_027175.3		69702	141803171	NM_027175.3	Ndufaf1	NP_081451.3	ILMN_1248304	004010689	S	1336	CTTACTTAAGACGGTAAGTACAGCATGGCCTCTCAGTGGAAGTTCTTCTG	2	-	119481252-119481301	2qE5	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 (Ndufaf1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]	CGI-65; 2410001M24Rik; CIA30	CGI-65; 2410001M24Rik; CIA30
Mus musculus	RefSeq	ILMN_201210	ILMN_236081	EG665389	XM_976601.1	XM_976601.1		665389	94386158	XM_976601.1	EG665389	XP_981695.1	ILMN_2541482	002120349	S	249	GTCCTGCATAGACATTGGCCCGACACAGAAGCTGCCACTATGGGCCTCAC	9	+	59799340-59799354:59799578-59799612	9qB	PREDICTED: Mus musculus predicted gene, EG665389 (EG665389), mRNA.					
Mus musculus	RefSeq	ILMN_246943	ILMN_246943	EIF4E1B	NM_001033269.2	NM_001033269.2		218268	89199236	NM_001033269.2	Eif4e1b	NP_001028441.1	ILMN_3024781	000010168	I	1658	ATTTGTGTAAAGACAGGTAGGACTGGGAACTGGGAATGCCCTGCACAGCC	13	+	54889581-54889630	13qB1	Mus musculus eukaryotic translation initiation factor 4E family member 1B (Eif4e1b), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AA473955; Gm273; Eif4eloo	AA473955; Gm273; Eif4eloo
Mus musculus	RefSeq	ILMN_197238	ILMN_246943	EIF4E1B	NM_001033269.2	NM_001033269.2		218268	89199236	NM_001033269.2	Eif4e1b	NP_001028441.1	ILMN_1254206	000650039	S	255	CCACAGAGAACATCCACCAGAGGTCCTGAGCAAGCTACACCCCTTGCAGT	13	+	54885870-54885919	13qB1	Mus musculus eukaryotic translation initiation factor 4E family member 1B (Eif4e1b), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AA473955; Gm273; Eif4eloo	AA473955; Gm273; Eif4eloo
Mus musculus	MEEBO	ILMN_222373	ILMN_222373	D130012P04RIK	scl41191.1.1_195	NM_176903.2			31342357	NM_176903.2	D130012P04Rik		ILMN_2748661	002570626	S	2466	GGAGCCAGTGAAAGGACTAACTGGATAGAGATGTTTGTATGCAGTTCTGT										
Mus musculus	RefSeq	ILMN_196563	ILMN_196563	GSTM3	NM_010359.1	NM_010359.1		14864	33468898	NM_010359.1	Gstm3	NP_034489.1	ILMN_1216149	002070746	S	1116	CAGGCCTGTCTCATGTACAATAAAGCCTGAAACACACTTGAAACACAATA	3	-	107766634-107766683	3qF2.3	Mus musculus glutathione S-transferase, mu 3 (Gstm3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]	AI042769; mGSTM5; Fsc2	AI042769; mGSTM5; Fsc2
Mus musculus	RefSeq	ILMN_219307	ILMN_310724	LOC100044599	XM_001472588.1	XM_001472588.1		100044599	149270880	XM_001472588.1	LOC100044599	XP_001472638.1	ILMN_2707052	001690209	S	702	GTTTTCATAATGTAGAAGGAAGCCTTGCATCTGGAGAGAATGATTGCAAC					PREDICTED: Mus musculus similar to Ssxb3 protein, transcript variant 1 (LOC100044599), mRNA.					
Mus musculus	RefSeq	ILMN_198150	ILMN_198150	LOC381089	XM_355008.1	XM_355008.1			38082164	XM_355008.1	LOC381089		ILMN_2530660	003520100	S	1103	CACACCCGAAGGCGACCAACACGATACGACGAGCACAGACCTTCTAATGC										
Mus musculus	MEEBO	ILMN_209900	ILMN_209900	AKAP9	scl26896.34.1_29	NM_194462.1			39930556	NM_194462.1	Akap9		ILMN_2627299	000730725	S	11795	GTGCTGCTGGACGAGTACCTTGCGGTGCCCTGCGCTTTTCTTACAAAGCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_215313	ILMN_215313	FAAH	NM_010173.2	NM_010173.2		14073	31542794	NM_010173.2	Faah	NP_034303.2	ILMN_3006333	006550563	S	3568	TGGGAGCCAAGGAACAAGTATTTCAAGAAGAGTGGAGTCGACTTAAACGC	4	-	115494786-115494835	4qD1	Mus musculus fatty acid amide hydrolase (Faah), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]	AW412498	AW412498
Mus musculus	Riken	ILMN_206272	ILMN_206272	D030068E18RIK	ri|D030068E18|PX00181M05|AK083698|2946					AK083698	D030068E18Rik		ILMN_2578875	005270114	S	2879	GCCTCTGAGACCAAGCATTTTCTTATGTTTCCCTCTTCAGTTGAGAGCCC										
Mus musculus	RefSeq	ILMN_213078	ILMN_213078	MFAP4	NM_029568.2	NM_029568.2		76293	118130625	NM_029568.2	Mfap4	NP_083844.1	ILMN_2633350	000020075	S	1155	ACCCTCGACAGAGTCATGCAGCACCTGTGGCATTGCCAATCAGCTCTTGC	11	+	61301848-61301897	11qB2	Mus musculus microfibrillar-associated protein 4 (Mfap4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	RP23-155J3.5; 1110007F23Rik	RP23-155J3.5; 1110007F23Rik
Mus musculus	RefSeq	ILMN_211016	ILMN_250863	GPIHBP1	NM_026730.1	NM_026730.1		68453	58037120	NM_026730.1	Gpihbp1	NP_081006.1	ILMN_2614842	004220280	S	8	CAGCCTGAGCCAGGATGAAGGCTCTCAGGGCTGTCCTCCTGATCTTGCTA	15	+	75427095-75427108:75427109-75427144	15qD3	Mus musculus GPI-anchored HDL-binding protein 1 (Gpihbp1), mRNA.	Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IDA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence IDA]	1110002J19Rik; GPI-HBP1	1110002J19Rik; GPI-HBP1
Mus musculus	RefSeq	ILMN_211016	ILMN_250863	GPIHBP1	NM_026730.1	NM_026730.1		68453	58037120	NM_026730.1	Gpihbp1	NP_081006.1	ILMN_1217969	005900544	S	680	TCACTTGTCTGTGGGCGTCAGGGGCCTGAAGACCCGTTCTCCTCCAACCA	15	+	75428526-75428554:75428555-75428575	15qD3	Mus musculus GPI-anchored HDL-binding protein 1 (Gpihbp1), mRNA.	Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IDA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence IDA]	1110002J19Rik; GPI-HBP1	1110002J19Rik; GPI-HBP1
Mus musculus	RefSeq	ILMN_220456	ILMN_220456	CNGB3	NM_013927.2	NM_013927.2		30952	118130962	NM_013927.2	Cngb3	NP_038955.1	ILMN_2722268	001340475	S	4131	GGGTAGTGTCTGATAGAGTTGTCCTTTAAGTTTTTACAAAGGCTGGTTGA	4	+	19437193-19437242	4qA3	Mus musculus cyclic nucleotide gated channel beta 3 (Cngb3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways involving a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9187] [evidence IC ]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IC ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of a cation by a channel that opens when intracellular cGMP has been bound by the channel complex or one of its constituent parts [goid 5223] [evidence IPI]	Cngbeta2; CCNC2; CNG6	Cngbeta2; CCNC2; CNG6
Mus musculus	MEEBO	ILMN_190508	ILMN_190508	4933424A20RIK	scl076860.1_148						4933424A20Rik		ILMN_2470764	006620156	S	18	GCTGATCAAGGTCCTGAGAGAGGTTTCCCAGGCAATGTTCGCAGCCATCT										
Mus musculus	RefSeq	ILMN_209452	ILMN_236413	SERPINI2	NM_026460.2	NM_026460.2		67931	114158680	NM_026460.2	Serpini2	NP_080736.2	ILMN_2769554	006180681	S	1282	GATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAA	3	-	75046371-75046420	3qE3	Mus musculus serine (or cysteine) peptidase inhibitor, clade I, member 2 (Serpini2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Spi14; 1810006A24Rik	Spi14; 1810006A24Rik
Mus musculus	RefSeq	ILMN_213267	ILMN_213267	OLFR849	NM_146527.1	NM_146527.1		258520	33239267	NM_146527.1	Olfr849	NP_666738.1	ILMN_2635402	002510358	S	619	TTTGGTGTTCCTGTCTTTGGGATTATTTTGTCTTATATTCACATTATATC	9	+	19245977-19246026	9qA2	Mus musculus olfactory receptor 849 (Olfr849), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR151-1	MOR151-1
Mus musculus	RefSeq	ILMN_211179	ILMN_211179	LZTS2	NM_145503.1	NM_145503.1		226154	21703989	NM_145503.1	Lzts2	NP_663478.1	ILMN_1218761	006960598	S	2410	TGATCCCCATGTTGAGCTCTGCAAGCCTCTTCTGGGCTGAGGGGGCTGAA	19	+	45101330-45101379	19qC3	Mus musculus leucine zipper, putative tumor suppressor 2 (Lzts2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		LAPSER1; BC014695; MGC7094; mKIAA1813	LAPSER1; BC014695; MGC7094; mKIAA1813
Mus musculus	Riken	ILMN_202099	ILMN_202099	2810008H01RIK	ri|2810008H01|ZX00064N09|AK012689|827					AK012689	2810008H01Rik		ILMN_1247421	006660703	S	618	CGTTGGGCTTAATTAGAAAGTAGGTTATGCTGCTTATTAACTGCCCTGCC										
Mus musculus	RefSeq	ILMN_220244	ILMN_220244	ERC1	NM_178085.3	NM_178085.3		111173	120300941	NM_178085.3	Erc1	NP_835186.1	ILMN_2719614	002340452	S	2162	GGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCCTCTTGAATGGT	6	-	119722864-119722913	6qF1	Mus musculus ELKS/RAB6-interacting/CAST family member 1 (Erc1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IDA]	RAB6IP2A; B430107L16Rik; 9630025C19Rik; ELKS; 5033405M01Rik; RAB6IP2B; Rab6ip2; 4930404L01Rik; mKIAA1081	RAB6IP2A; B430107L16Rik; 9630025C19Rik; ELKS; 5033405M01Rik; RAB6IP2B; Rab6ip2; 4930404L01Rik; mKIAA1081
Mus musculus	RefSeq	ILMN_215146	ILMN_215146	1110059G10RIK	NM_025419.2	NM_025419.2		66202	31541807	NM_025419.2	1110059G10Rik	NP_079695.2	ILMN_2825260	004610128	S	3092	AGGCTTCCGGACAGTTTTACAAGCACAAGGCAGTGGGGCTGTGTGTCTGC	9	-	122793978-122794027	9qF4	Mus musculus RIKEN cDNA 1110059G10 gene (1110059G10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220850	ILMN_250968	PLA2G4F	NM_001024145.1	NM_001024145.1		271844	67972422	NM_001024145.1	Pla2g4f	NP_001019316.1	ILMN_2727722	003140056	S	3045	CCCAGCTCTGACCCACTCCAAACCCCCGGACTCAGTGATGTGGAGAATAA	2	-	120125723-120125772	2qE5	Mus musculus phospholipase A2, group IVF (Pla2g4f), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a glycerophospholipid [goid 4620] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IDA]	Gm647; 4732472I07Rik; Pla2zeta	Gm647; 4732472I07Rik; Pla2zeta
Mus musculus	RefSeq	ILMN_212432	ILMN_310618	LOC100041729	XM_001477654.1	XM_001477654.1		100041729	149265491	XM_001477654.1	LOC100041729	XP_001477704.1	ILMN_1231037	006590026	S	526	GACGAATATAGCAGGCAAGCAGCAGGAAAACAAATAATTGTGGTACCTGG	14	-	42297843-42297868:42299507-42299530	14qB	PREDICTED: Mus musculus hypothetical protein LOC100041729 (LOC100041729), mRNA.					
Mus musculus	RefSeq	ILMN_201584	ILMN_201584	PTAFR	XM_357441.1	XM_357441.1			38079352	XM_357441.1	Ptafr		ILMN_2769521	003780440	S	1347	AGTGGGGCATCAACTTAAGGTTTGGTCAGTGACTTCCAGGGGCTACAGGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The chemical reactions and pathways resulting in the formation of inositol trisphosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached [goid 32959] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with platelet activating factor to initiate a change in cell activity [goid 4992] [evidence IEA]; Interacting selectively with lipopolysaccharide [goid 1530] [evidence IMP]; Combining with lipopolysaccharide to initiate a change in cell activity [goid 1875] [evidence IMP]		
Mus musculus	MEEBO	ILMN_190342	ILMN_190342	2610319H10RIK	scl35097.1.1_70						2610319H10Rik		ILMN_2469320	002470685	S	7	GCCTCCCATGGAACTTTGGAACTTAGGACGGGAAAGGTGAAAGTGCCTCC										
Mus musculus	RefSeq	ILMN_222668	ILMN_222668	CEND1	NM_021316.2	NM_021316.2		57754	31981113	NM_021316.2	Cend1	NP_067291.1	ILMN_2753173	006130064	S	1202	AGTGTATGCCCCAGGAGAGCACCGGAGGCTAGGACCACCTTACTTCCTGC	7	-	141278176-141278225	7qF5	Mus musculus cell cycle exit and neuronal differentiation 1 (Cend1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI415214; 1500001H12Rik; BM88	AI415214; 1500001H12Rik; BM88
Mus musculus	Riken	ILMN_206849	ILMN_206849	D430030F08RIK	ri|D430030F08|PX00194D21|AK085049|1356					AK085049	D430030F08Rik		ILMN_2583135	006650341	S	1122	CTGCAGCTCAGTGCCAAGGGTGGGTCTATTGTGCTGGGAGGGATGTTCCT										
Mus musculus	MEEBO	ILMN_220908	ILMN_220908	4933413G11RIK	scl16742.1.8_130	XM_129825.2			38049583	XM_129825.2	4933413G11Rik		ILMN_2728456	002690044	S	1101	CCTGAGTTACCGATACACAAGGAAAGAGTAGCATCTACCACGTTGGCATC										
Mus musculus	RefSeq	ILMN_198334	ILMN_234649	LOC194360	XR_004593.1	XR_004593.1		194360	94377326	XR_004593.1	LOC194360		ILMN_2531319	002970020	S	338	TCCTGATTATAATTCATGGACTTTTGATAATGACATCATGCTGATTAAGT				6qB1	PREDICTED: Mus musculus hypothetical LOC194360 (LOC194360), mRNA.					
Mus musculus	MEEBO	ILMN_189702	ILMN_189702	1810008K20RIK	scl069093.1_26						1810008K20Rik		ILMN_2463630	004220307	S	6	TGTGATTCTTTTCCAATCACACTGAACATTTAGCTGTACTTTCATGTTTG										
Mus musculus	RefSeq	ILMN_218501	ILMN_218501	RWDD4A	NM_203507.2	NM_203507.2		192174	56785408	NM_203507.2	Rwdd4a	NP_987103.1	ILMN_2696620	007200386	S	2749	CACTTGAACACTTGCATCAGAAATAATGCTGACCTGATAATGCTCCCACT	8	+	48638052-48638101	8qB1.1	Mus musculus RWD domain containing 4A (Rwdd4a), mRNA.				BC016198; Gm1942; MGC27606	BC016198; Gm1942; MGC27606
Mus musculus	Riken	ILMN_203992	ILMN_203992	CDH1	ri|A630035B16|PX00145E04|AK041755|662					AK041755	Cdh1		ILMN_1227162	006940730	S	453	GGCTCATAGAGTGACTTCACAGGGTCAGCAGGGCAGGCATTTGAACCGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]		
Mus musculus	MEEBO	ILMN_196275	ILMN_196275	SRRM1	scl23675.18_254				7949114	NM_016799	Srrm1		ILMN_2693541	006770653	S	2810	GTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCCTTTTGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISO]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [evidence ISO]		
Mus musculus	MEEBO	ILMN_196275	ILMN_196275	SRRM1	scl23675.18_254				7949114	NM_016799	Srrm1		ILMN_2693543	002570358	S	2803	TTAATGTGTTTCAACTTTTTACAACTACGTTCAAGGGACAGCACAGGGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISO]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [evidence ISO]		
Mus musculus	RefSeq	ILMN_186741	ILMN_250732	THAP2	NM_025780.3	NM_025780.3		66816	111955182	NM_025780.3	Thap2	NP_080056.1	ILMN_1249124	007000161	S	3034	GCCTAAAATAAGCTGGGTAACTAATCGTATTAACATAACCTATGCTCTTG	10	-	114807346-114807395	10qD2	Mus musculus THAP domain containing, apoptosis associated protein 2 (Thap2), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI649097; 2900040O07Rik; AI450385; 9030625G08Rik	AI649097; 2900040O07Rik; AI450385; 9030625G08Rik
Mus musculus	RefSeq	ILMN_212096	ILMN_212096	P2RX1	NM_008771.2	NM_008771.2		18436	31560658	NM_008771.2	P2rx1	NP_032797.2	ILMN_2932453	000110274	S	2180	ACAGCCATCTGAACACACCTACACTCCCAGGCAGGGACACACGGTCTCCA	11	+	72826498-72826500:72826432-72826478	11qB4	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 1 (P2rx1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The side of the outer membrane that is opposite to the side that faces the periplasm of the cell [goid 31240] [evidence IDA]	Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence ISO]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IDA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IMP]; The introduction of semen or sperm into the genital tract of a female [goid 7320] [evidence IMP]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IMP]; A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism [goid 16265] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 43270] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 43270] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; The regulated release of serotonin by a platelet or group of platelets [goid 2554] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence IMP]; Any process that increases the frequency, rate or extent of vascular smooth muscle contraction [goid 3056] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISO]; Combining with a purine nucleotide to initiate a change in cell activity [goid 1614] [evidence ISO]; Combining with a purine nucleotide to initiate a change in cell activity [goid 1614] [evidence IMP]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP]	BB122383; RP-2; AI323649; P2x; Pdcd3	BB122383; RP-2; AI323649; P2x; Pdcd3
Mus musculus	RefSeq	ILMN_212096	ILMN_212096	P2RX1	NM_008771.2	NM_008771.2		18436	31560658	NM_008771.2	P2rx1	NP_032797.2	ILMN_2932455	006220360	S	2392	CAGCTTGGCTGGAACATGAGGGCTGAGGAGGCAAGGGGTGAGACACAATA	11	+	72826967-72826980:72827322-72827357	11qB4	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 1 (P2rx1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The side of the outer membrane that is opposite to the side that faces the periplasm of the cell [goid 31240] [evidence IDA]	Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence ISO]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IDA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IMP]; The introduction of semen or sperm into the genital tract of a female [goid 7320] [evidence IMP]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IMP]; A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism [goid 16265] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 43270] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 43270] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; The regulated release of serotonin by a platelet or group of platelets [goid 2554] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence IMP]; Any process that increases the frequency, rate or extent of vascular smooth muscle contraction [goid 3056] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISO]; Combining with a purine nucleotide to initiate a change in cell activity [goid 1614] [evidence ISO]; Combining with a purine nucleotide to initiate a change in cell activity [goid 1614] [evidence IMP]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP]	BB122383; RP-2; AI323649; P2x; Pdcd3	BB122383; RP-2; AI323649; P2x; Pdcd3
Mus musculus	RefSeq	ILMN_222463	ILMN_222463	SERPINB5	NM_009257.3	NM_009257.3		20724	118130477	NM_009257.3	Serpinb5	NP_033283.1	ILMN_2749909	000670475	S	2347	AGTCTACATAAATAATTTATAAAATGGTTCTGGTAAGTCAGTTATGTTGC	1	+	108779707-108779756	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 5 (Serpinb5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	ovalbumin; 1110036M19Rik; AI646751; Maspin; Spi7; AI462524	ovalbumin; 1110036M19Rik; AI646751; Maspin; Spi7; AI462524
Mus musculus	RefSeq	ILMN_209438	ILMN_209438	FAM173A	NM_145410.3	NM_145410.3		214917	142348873	NM_145410.3	Fam173a	NP_663385.2	ILMN_1215218	002030181	S	718	CCCAGAGTCCAGTTCTACCTTAGTCCCTAGAGCCCCTGTTTGACAAACTG	17	-	25927485-25927492:25927493-25927534	17qA3.3	Mus musculus family with sequence similarity 173, member A (Fam173a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC6974	MGC6974
Mus musculus	RefSeq	ILMN_210613	ILMN_210613	PIM2	NM_138606.1	NM_138606.1		18715	20070429	NM_138606.1	Pim2	NP_613072.1	ILMN_1213136	006020246	S	269	CTTTCGAGGCCGAATACCGACTTGGCCCCCTCCTGGGTAAGGGAGGCTTT	X	+	7035660-7035709	XqA1.1	Mus musculus proviral integration site 2 (Pim2), transcript variant 1, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	DXCch3; Pim-2	DXCch3; Pim-2
Mus musculus	RefSeq	ILMN_216662	ILMN_216662	PHOSPHO1	NM_153104.2	NM_153104.2		237928	110665717	NM_153104.2	Phospho1	NP_694744.1	ILMN_1214899	001510392	S	1008	GCCCACGTGGTGCCCTGGGAAACAGCCGCCGATGTGCGCCAACATCTGCA	11	+	95692552-95692601	11qD	Mus musculus phosphatase, orphan 1 (Phospho1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reactions: O-phosphoethanolamine + H2O = ethanolamine + phosphate and phosphocholine + H2O = choline + phosphate [goid 33884] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	Phospo1; D11Moh36	Phospo1; D11Moh36
Mus musculus	RefSeq	ILMN_235869	ILMN_235869	GIT1	NM_001004144.1	NM_001004144.1		216963	51921284	NM_001004144.1	Git1	NP_001004144.1	ILMN_2940541	004120343	S	3368	TGGGGCTGGCTCCCCAGGGTCCCCAACTCAGCTGGTGGCTGTGGAACTGA	11	+	77320994-77321043	11qB5	Mus musculus G protein-coupled receptor kinase-interactor 1 (Git1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	p95Cat; Cat-1	p95Cat; Cat-1
Mus musculus	RefSeq	ILMN_252103	ILMN_252103	OLFR987	NM_001011785.1	NM_001011785.1		257951	58801339	NM_001011785.1	Olfr987	NP_001011785.1	ILMN_3161703	000770736	S	329	TCGACTGTTTCATCCTAGCTGCTATGGCTGTGGACCGCTACGTGGCCATC	2	-	85171675-85171724	2qD	Mus musculus olfactory receptor 987 (Olfr987), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR203-7P	MOR203-7P
Mus musculus	Riken	ILMN_203239	ILMN_203239	C330006H24RIK	ri|C330006H24|PX00075J05|AK049137|1735					AK049137	C330006H24Rik		ILMN_1222730	000290014	S	1599	CCCCCAAAGGGGGTTGCAAACTGCTACTCTAGGCCATCCTGGTATACTCA										
Mus musculus	RefSeq	ILMN_195489	ILMN_310926	LOC100041483	XM_001473227.1	XM_001473227.1		100041483	149275198	XM_001473227.1	LOC100041483	XP_001473277.1	ILMN_2739807	003420682	S	154	GTGGGTAGTTGCAAAAGTAGAAACTTCTCGTTCACCATATGGCAGCAGGA	Un|NT_166433.1	+	48081-48129:50322-50322		PREDICTED: Mus musculus similar to T-cell leukemia protein Tcl1b3 (LOC100041483), mRNA.					
Mus musculus	RefSeq	ILMN_198894	ILMN_317570	LOC672498	XM_001479836.1	XM_001479836.1		672498	149259359	XM_001479836.1	LOC672498	XP_001479886.1	ILMN_1220489	003140661	S	645	CCCCGATGCCCCTCTGACTTACAGGAATCACTCACCAGAACAGCCAGTTG				8qE1	PREDICTED: Mus musculus hypothetical LOC672498, transcript variant 1 (LOC672498), mRNA.					
Mus musculus	RefSeq	ILMN_210648	ILMN_210648	PRL4A1	NM_011165.3	NM_011165.3		19110	146134332	NM_011165.3	Prl4a1	NP_035295.1	ILMN_2607776	000450114	S	748	CCTTCTGTCCCAGTGATCATTCTCGACAATGCACTTGTGTAAAGTACATG				13qA3.1	Mus musculus prolactin family 4, subfamily a, member 1 (Prl4a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with the prolactin receptor [goid 5148] [evidence ISS]	AA409771; Prlpa; PLP-A	AA409771; Prlpa; PLP-A
Mus musculus	RefSeq	ILMN_210008	ILMN_251619	PTCD2	NM_026873.2	NM_026873.2		68927	118130266	NM_026873.2	Ptcd2	NP_081149.1	ILMN_1239205	000130441	S	457	CATCTACAAGGCTTCTTCCTAGATTCAACGTCATTCAATATTTTGATGGA	13	-	100102871-100102920	13qD1	Mus musculus pentatricopeptide repeat domain 2 (Ptcd2), mRNA.				1190005P08Rik	1190005P08Rik
Mus musculus	RefSeq	ILMN_210008	ILMN_251619	PTCD2	NM_026873.2	NM_026873.2		68927	118130266	NM_026873.2	Ptcd2	NP_081149.1	ILMN_1227209	006180296	S	362	TCACTTTGGGGGAATACAAGTTCGGACCAGTTTTCATGAGGCTGTGCTAC	13	-	100106662-100106711	13qD1	Mus musculus pentatricopeptide repeat domain 2 (Ptcd2), mRNA.				1190005P08Rik	1190005P08Rik
Mus musculus	RefSeq	ILMN_210008	ILMN_251619	PTCD2	NM_026873.2	NM_026873.2		68927	118130266	NM_026873.2	Ptcd2	NP_081149.1	ILMN_2618795	004830521	S	1166	TTTCCCTGGTCTGGAGCAGCTGCTGCTACAGTGGATTACTGGCTGCTCCG	13	-	100090063-100090112	13qD1	Mus musculus pentatricopeptide repeat domain 2 (Ptcd2), mRNA.				1190005P08Rik	1190005P08Rik
Mus musculus	Riken	ILMN_202439	ILMN_202439	9130023F12RIK	ri|9130023F12|PX00026P01|AK018647|2238					AK018647	9130023F12Rik		ILMN_2549613	005670408	S	2178	GGTGTGGGCTGGCAGTTCTTCAGTTCTTTCTTTACTGCCATGCCATGCCC										
Mus musculus	Riken	ILMN_201784	ILMN_201784	2210410D02RIK	ri|2210410D02|ZX00054I09|AK008881|777					AK008881	2210410D02Rik		ILMN_1239137	001300487	S	154	CTATAAGAGGTATGGGACCAGAAAAGACATTGCGGGAACTGAGCGTTCTG										
Mus musculus	RefSeq	ILMN_208922	ILMN_232999	OLFR483	NM_146735.1	NM_146735.1		258730	22129370	NM_146735.1	Olfr483	NP_666946.1	ILMN_2590828	005690112	S	617	CGGCTGGCTCAGTTACTATGATTACAGTGTTTGTCATAGTCATTTCCTAT	7	+	115247441-115247490	7qE3	Mus musculus olfactory receptor 483 (Olfr483), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-12	MOR204-12
Mus musculus	RefSeq	ILMN_218498	ILMN_218498	CTNNB1	NM_007614.2	NM_007614.2		12387	31560726	NM_007614.2	Ctnnb1	NP_031640.1	ILMN_2696575	003060497	S	3009	GGAGTGACTCACGCAGTGAAGAATGCACACGAATGGATCACAAGATGGCG	9	+	120869086-120869135	9qF4	Mus musculus catenin (cadherin associated protein), beta 1 (Ctnnb1), mRNA.	A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]; The portion of the plasma membrane surrounding a microvillus [goid 31528] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IGI]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte differentiation [goid 32331] [evidence IGI]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The establishment, maintenance and elaboration of the dorsal/ventral axis [goid 9950] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation [goid 30858] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the arm are generated and organized. Morphogenesis pertains to the creation of form. In humans, the arms are the two upper limbs of the body from the shoulder to the hand [goid 35117] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IDA]; Any process that modulates the frequency, rate or extent of osteoblast differentiation [goid 45667] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process by which a cell becomes committed to become part of the endoderm [goid 1711] [evidence IMP]; The formation of the endoderm during gastrulation [goid 1706] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with the alpha subunit of the catenin complex [goid 45294] [evidence IPI]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IPI]	Mesc; Catnb	Mesc; Catnb
Mus musculus	RefSeq	ILMN_211511	ILMN_218498	CTNNB1	NM_007614.2	NM_007614.2		12387	31560726	NM_007614.2	Ctnnb1	NP_031640.1	ILMN_2616556	003180020	S	3429	GGCTCAAATAACACCTCTTACTGATTTACCCTACCGCACGTATCCCCGAT	9	+	120869506-120869555	9qF4	Mus musculus catenin (cadherin associated protein), beta 1 (Ctnnb1), mRNA.	A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]; The portion of the plasma membrane surrounding a microvillus [goid 31528] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IGI]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte differentiation [goid 32331] [evidence IGI]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The establishment, maintenance and elaboration of the dorsal/ventral axis [goid 9950] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation [goid 30858] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the arm are generated and organized. Morphogenesis pertains to the creation of form. In humans, the arms are the two upper limbs of the body from the shoulder to the hand [goid 35117] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IDA]; Any process that modulates the frequency, rate or extent of osteoblast differentiation [goid 45667] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process by which a cell becomes committed to become part of the endoderm [goid 1711] [evidence IMP]; The formation of the endoderm during gastrulation [goid 1706] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with the alpha subunit of the catenin complex [goid 45294] [evidence IPI]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IPI]	Mesc; Catnb	Mesc; Catnb
Mus musculus	RefSeq	ILMN_218498	ILMN_218498	CTNNB1	NM_007614.2	NM_007614.2		12387	31560726	NM_007614.2	Ctnnb1	NP_031640.1	ILMN_2994460	005870370	S	3391	GTGCGGTAGGGTAAATCAGTAAGAGGTGTTATTTGAGCCTTGTTTTGGAC	9	+	120869468-120869517	9qF4	Mus musculus catenin (cadherin associated protein), beta 1 (Ctnnb1), mRNA.	A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]; The portion of the plasma membrane surrounding a microvillus [goid 31528] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IGI]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte differentiation [goid 32331] [evidence IGI]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The establishment, maintenance and elaboration of the dorsal/ventral axis [goid 9950] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation [goid 30858] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the arm are generated and organized. Morphogenesis pertains to the creation of form. In humans, the arms are the two upper limbs of the body from the shoulder to the hand [goid 35117] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IDA]; Any process that modulates the frequency, rate or extent of osteoblast differentiation [goid 45667] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process by which a cell becomes committed to become part of the endoderm [goid 1711] [evidence IMP]; The formation of the endoderm during gastrulation [goid 1706] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with the alpha subunit of the catenin complex [goid 45294] [evidence IPI]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IPI]	Mesc; Catnb	Mesc; Catnb
Mus musculus	RefSeq	ILMN_188905	ILMN_249492	4930520P13RIK	XM_920304.2	XM_920304.2		75086	94395460	XM_920304.2	4930520P13Rik	XP_925397.1	ILMN_1254912	006330619	S	380	GACAATGGTGATCTCAGTTCTTCTGGCTTACTCTCACCACAGTGTGCTCC				13qC1	PREDICTED: Mus musculus RIKEN cDNA 4930520P13 gene (4930520P13Rik), mRNA.					
Mus musculus	Riken	ILMN_202896	ILMN_202896	6430548O12RIK	ri|6430548O12|PX00047G22|AK032448|2579					AK032448	6430548O12Rik		ILMN_1213360	002970767	S	2410	GTACAGGCACAACCTCACTCTTGGCTTTTTTATGTAGGTGTGGTGGGCCC										
Mus musculus	RefSeq	ILMN_218410	ILMN_245010	2310047D07RIK	XM_975744.1	XM_975744.1		69657	94375797	XM_975744.1	2310047D07Rik	XP_980838.1	ILMN_1213569	006250673	S	387	GCCTGAAGGGAATACCTGTCCAGGTGATACGGGACAAGAAAAACACCACG				5qG3	PREDICTED: Mus musculus RIKEN cDNA 2310047D07 gene (2310047D07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210675	ILMN_210675	NAP1L5	NM_021432.2	NM_021432.2		58243	148277107	NM_021432.2	Nap1l5	NP_067407.1	ILMN_2608073	000430170	S	1428	AATGTAGCAATTCTGTAAAGCATGTGTATCCAGTGTTGCCTAGTTTGACC				6qB3	Mus musculus nucleosome assembly protein 1-like 5 (Nap1l5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		1110020M21Rik	1110020M21Rik
Mus musculus	RefSeq	ILMN_210528	ILMN_210528	AP1S3	NM_183027.1	NM_183027.1		252903	35215316	NM_183027.1	Ap1s3	NP_898848.1	ILMN_2611472	004180315	S	2432	TTTAGTGGAAAACCATTATGTGTGTTTTCTTTATTATCATAAGATTGTAA	1	-	79603526-79603575	1qC4	Mus musculus adaptor-related protein complex AP-1, sigma 3 (Ap1s3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	[s]3A; 1190009B22; Jr2	[s]3A; 1190009B22; Jr2
Mus musculus	RefSeq	ILMN_210528	ILMN_210528	AP1S3	NM_183027.1	NM_183027.1		252903	35215316	NM_183027.1	Ap1s3	NP_898848.1	ILMN_2606532	000770091	S	1379	TAGCAATAATTGTGAACATGAGATACAAATGATATTAGATACTTTATTTT	1	-	79604896-79604945	1qC4	Mus musculus adaptor-related protein complex AP-1, sigma 3 (Ap1s3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	[s]3A; 1190009B22; Jr2	[s]3A; 1190009B22; Jr2
Mus musculus	RefSeq	ILMN_210528	ILMN_210528	AP1S3	NM_183027.1	NM_183027.1		252903	35215316	NM_183027.1	Ap1s3	NP_898848.1	ILMN_2908485	006840338	S	2390	TGTGAGTAAATTCAGGGGATGTGGGGAACAGCTTACATGGCTTTTAGTGG	1	-	79603568-79603617	1qC4	Mus musculus adaptor-related protein complex AP-1, sigma 3 (Ap1s3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	[s]3A; 1190009B22; Jr2	[s]3A; 1190009B22; Jr2
Mus musculus	RefSeq	ILMN_216765	ILMN_309979	LOC100044755	XM_001472988.1	XM_001472988.1		100044755	149264447	XM_001472988.1	LOC100044755	XP_001473038.1	ILMN_2675122	002680446	S	562	TGAATTGGGCTGACTTTTTAAAAAAGACAAAATAGCAACATCAATAAAGG					PREDICTED: Mus musculus similar to APOBEC-2 protein (LOC100044755), mRNA.					
Mus musculus	RefSeq	ILMN_211196	ILMN_211196	KIFC2	NM_010630.2	NM_010630.2		16581	117168296	NM_010630.2	Kifc2	NP_034760.2	ILMN_2695158	000290369	S	2803	TAATCGCTCCCCTACTTCCATTACACCAAAATTATGTCCGTTCCAGTCTT	15	+	76492308-76492357	15qD3	Mus musculus kinesin family member C2 (Kifc2), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209400	ILMN_209400	CCDC42	NM_177779.2	NM_177779.2		276920	31343047	NM_177779.2	Ccdc42	NP_808447.1	ILMN_2595460	001740746	S	543	GCAAGTCCGGATGTAAGGAAGTAACATGCTTCTAGAATGTTCCAAGACAC	11	+	68411214-68411229:68411230-68411263	11qB3	Mus musculus coiled-coil domain containing 42 (Ccdc42), mRNA.				A530001H01Rik	A530001H01Rik
Mus musculus	RefSeq	ILMN_219674	ILMN_219674	LCN2	NM_008491.1	NM_008491.1		16819	34328048	NM_008491.1	Lcn2	NP_032517.1	ILMN_2712075	004890626	S	416	GTGGCCACCACGGACTACAACCAGTTCGCCATGGTATTTTTCCGAAAGAC	2	-	32241263-32241312	2qB	Mus musculus lipocalin 2 (Lcn2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW212229; 24p3; NGAL	AW212229; 24p3; NGAL
Mus musculus	MEEBO	ILMN_188235	ILMN_188235	SYPL	scl0002286.1_2				26251301	NM_013635	Sypl		ILMN_2450949	006590114	S	12	CGGCACACGCATGGCTTCCAAAGCCAACATGGTTCGTCAGCGGTTCAGCC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198142	ILMN_228605	UHRF1BP1	NM_001080769.1	NM_001080769.1		224648	124107590	NM_001080769.1	Uhrf1bp1	NP_001074238.1	ILMN_2530637	002970706	S	5335	CCGAGTGCTCAGCTGCTCCTGAGTGCTCACCTGCACCCAAGTGTTCACCT	17	+	28022385-28022434	17qA3.3	Mus musculus UHRF1 (ICBP90) binding protein 1 (Uhrf1bp1), mRNA.				1110020K19Rik; KIAA4127; mKIAA4127; AA408674	1110020K19Rik; KIAA4127; mKIAA4127; AA408674
Mus musculus	RefSeq	ILMN_192414	ILMN_228605	UHRF1BP1	NM_001080769.1	NM_001080769.1		224648	124107590	NM_001080769.1	Uhrf1bp1	NP_001074238.1	ILMN_2487847	001230215	S	8331	CACTCAGCAGCACACGGGAAGTGGGCCAGTGGATTGCCAACTACATCAGG	17	+	28028117-28028166	17qA3.3	Mus musculus UHRF1 (ICBP90) binding protein 1 (Uhrf1bp1), mRNA.				1110020K19Rik; KIAA4127; mKIAA4127; AA408674	1110020K19Rik; KIAA4127; mKIAA4127; AA408674
Mus musculus	RefSeq	ILMN_228605	ILMN_228605	UHRF1BP1	NM_001080769.1	NM_001080769.1		224648	124107590	NM_001080769.1	Uhrf1bp1	NP_001074238.1	ILMN_2899133	006620431	S	8296	TCCGAAGAGAACAGCTTCCAGCCTGCTTCCCGTGACACTCAGCAGCACAC	17	+	28028082-28028131	17qA3.3	Mus musculus UHRF1 (ICBP90) binding protein 1 (Uhrf1bp1), mRNA.				1110020K19Rik; KIAA4127; mKIAA4127; AA408674	1110020K19Rik; KIAA4127; mKIAA4127; AA408674
Mus musculus	Riken	ILMN_206942	ILMN_206942	TBXAS1	ri|D630023D13|PX00196P02|AK085414|2904					AK085414	Tbxas1		ILMN_1234543	000430450	S	2620	GCAAGGCTGCTTCAAGGACCATCTCCAAGTCCCGGAAAATGACTGACAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-9-alpha,11-alpha-epoxy-15-hydroxythromba-5,13-dienoate [goid 4796] [evidence IMP]		
Mus musculus	Riken	ILMN_202174	ILMN_202174	3110050L10RIK	ri|3110050L10|ZX00072G14|AK014201|1048					AK014201	3110050L10Rik		ILMN_1233812	000620181	S	791	ATGATAGAGTTCCCTTTAGTGACCATGAAGTACTGTGTGTAATGGTGCTC										
Mus musculus	RefSeq	ILMN_215614	ILMN_215614	RHOF	NM_175092.3	NM_175092.3		23912	101943786	NM_175092.3	Rhof	NP_780301.1	ILMN_2992047	003780192	S	1795	CTCCAACAGCCAAAGTCTTGAGTCCTGGCACTCCTCCTGGACGTCACAAC	5	-	123568487-123568536	5qF	Mus musculus ras homolog gene family, member f (Rhof), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Ifld1; AI845056; Arhf; Rif; AV026554	Ifld1; AI845056; Arhf; Rif; AV026554
Mus musculus	RefSeq	ILMN_200001	ILMN_200001	LOC381630	XM_355591.1	XM_355591.1			38079634	XM_355591.1	LOC381630		ILMN_1251841	001980719	S	644	CTAGTGCCTGTGCCCAGCCAGCAGAACCTCAAGTCCTGATAAAGCTTCTT										
Mus musculus	RefSeq	ILMN_220961	ILMN_220961	2310034C09RIK	NM_054100.2	NM_054100.2		117172	142368102	NM_054100.2	2310034C09Rik	NP_473441.1	ILMN_1228500	007210468	S	626	TTTTGCTTCTCGATCCTGCCAACCTTGTTATAGACCAACCTGGGGATCAG	16	+	88759717-88759766	16qC3.3	Mus musculus RIKEN cDNA 2310034C09 gene (2310034C09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222689	ILMN_222689	STXBP4	NM_011505.1	NM_011505.1		20913	6755691	NM_011505.1	Stxbp4	NP_035635.1	ILMN_2753444	001030685	S	1653	CAGCAACCCTGCTTCTGGAATCCAAGGAGCTTGTCAGATCTGTCCGTGCC	11	-	90355971-90355973:90396794-90396840	11qD	Mus musculus syntaxin binding protein 4 (Stxbp4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Synip; 6030470M02Rik	Synip; 6030470M02Rik
Mus musculus	RefSeq	ILMN_222689	ILMN_222689	STXBP4	NM_011505.1	NM_011505.1		20913	6755691	NM_011505.1	Stxbp4	NP_035635.1	ILMN_2788475	001170059	S	2324	GCTGTCCCACTAGCTGCTGACTACAACTTGTACCAAATAGGACACCACCT	11	-	90341413-90341462	11qD	Mus musculus syntaxin binding protein 4 (Stxbp4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Synip; 6030470M02Rik	Synip; 6030470M02Rik
Mus musculus	MEEBO	ILMN_188270	ILMN_188270	C030027L06RIK	scl12209.1.1_18						C030027L06Rik		ILMN_2451238	003520017	S	20	ATACCCGGGCCATACACACTCATCTCGACGTCTCTCTGCGGATGTATTTC										
Mus musculus	RefSeq	ILMN_218997	ILMN_218997	ANAPC13	NM_181394.1	NM_181394.1		69010	31088919	NM_181394.1	Anapc13	NP_852059.1	ILMN_2796089	000620168	S	242	TACAGGGCCTCCACGAGAACGTCCCACCCGCTGGAAACTGATGCCGGGCT	9	+	102489915-102489952:102489953-102489964	9qF1	Mus musculus anaphase promoting complex subunit 13 (Anapc13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SWM1; 1810004D07Rik; APC13	SWM1; 1810004D07Rik; APC13
Mus musculus	Riken	ILMN_201866	ILMN_201866	4631416I11RIK	ri|4631416I11|PX00011L12|AK014523|1668					AK014523	4631416I11Rik		ILMN_1224811	007650102	S	1427	GTGATACTGCCCTGTAGAGTGGTTGGTTGTAGTACTGTAACTGAATCTCC										
Mus musculus	RefSeq	ILMN_216058	ILMN_216058	INSIG2	NM_178082.2	NM_178082.2		72999	31342571	NM_178082.2	Insig2	NP_835183.1	ILMN_1216822	002850075	S	783	GTCCGTTCTTGGTTGCCATGTATATTTTTTGCTGGAGGCATAACGATGGG	1	-	123203465-123203514	1qE2.3	Mus musculus insulin induced gene 2 (Insig2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating deprivation of sterols. Sterols are a group of steroids characterized by the presence of one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 6991] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C730043J18Rik; Insig-2; 2900053I11Rik	C730043J18Rik; Insig-2; 2900053I11Rik
Mus musculus	RefSeq	ILMN_216058	ILMN_216058	INSIG2	NM_178082.2	NM_178082.2		72999	31342571	NM_178082.2	Insig2	NP_835183.1	ILMN_1234858	002680110	S	21	GTCTGTTTATGTGAGCTGGACTAGCTTGCTTTCCTGACATCTCTGCTTCC	1	-	123229087-123229136	1qE2.3	Mus musculus insulin induced gene 2 (Insig2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating deprivation of sterols. Sterols are a group of steroids characterized by the presence of one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 6991] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C730043J18Rik; Insig-2; 2900053I11Rik	C730043J18Rik; Insig-2; 2900053I11Rik
Mus musculus	MEEBO	ILMN_214009	ILMN_214009	D11BWG0280E	scl41858.22_427	XM_125972.5			38091270	XM_125972.5	D11Bwg0280e		ILMN_2643248	000130292	S	2639	CCTGACCACAGCCATCCAGAAAAGCCAACCTCAGGAGCTGGACAAGTGAT										
Mus musculus	RefSeq	ILMN_196610	ILMN_196610	CEBPE	NM_207131.1	NM_207131.1		110794	46369478	NM_207131.1	Cebpe	NP_997014.1	ILMN_3029849	001340634	I	974	TCACTCAGGAGCTAGACACTCTGCGCAACCTCTTCCGCCAGATCCCTGAG	14	-	55329414-55329463	14qC3	Mus musculus CCAAT/enhancer binding protein (C/EBP), epsilon (Cebpe), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cytokines, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 42089] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IMP]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC124002; MGC124003; Gm294; C/EBPe; CRP1	MGC124002; MGC124003; Gm294; C/EBPe; CRP1
Mus musculus	RefSeq	ILMN_196610	ILMN_196610	CEBPE	NM_207131.1	NM_207131.1		110794	46369478	NM_207131.1	Cebpe	NP_997014.1	ILMN_3103062	004880681	A	621	AGGCAGCTACAATCCCCTGCAGTACCAAGTGGCACACTGCGGGCAGACAG	14	-	55330341-55330390	14qC3	Mus musculus CCAAT/enhancer binding protein (C/EBP), epsilon (Cebpe), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cytokines, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 42089] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IMP]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC124002; MGC124003; Gm294; C/EBPe; CRP1	MGC124002; MGC124003; Gm294; C/EBPe; CRP1
Mus musculus	RefSeq	ILMN_197529	ILMN_196610	CEBPE	NM_207131.1	NM_207131.1		110794	46369478	NM_207131.1	Cebpe	NP_997014.1	ILMN_2528453	006330634	S	457	CTGCCGGCTGACCCTCGGCCATTCGCCTATCCCTCACACACATTTGGCCC	14	-	55330505-55330554	14qC3	Mus musculus CCAAT/enhancer binding protein (C/EBP), epsilon (Cebpe), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cytokines, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 42089] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IMP]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC124002; MGC124003; Gm294; C/EBPe; CRP1	MGC124002; MGC124003; Gm294; C/EBPe; CRP1
Mus musculus	RefSeq	ILMN_196610	ILMN_196610	CEBPE	NM_207131.1	NM_207131.1		110794	46369478	NM_207131.1	Cebpe	NP_997014.1	ILMN_1220301	003400608	S	1107	CACCCTTCTAGGTCCCCAGAGTCCTGAACAGGCCAAGCCTGAGACAGAGA	14	-	55329281-55329330	14qC3	Mus musculus CCAAT/enhancer binding protein (C/EBP), epsilon (Cebpe), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cytokines, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 42089] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IMP]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC124002; MGC124003; Gm294; C/EBPe; CRP1	MGC124002; MGC124003; Gm294; C/EBPe; CRP1
Mus musculus	RefSeq	ILMN_217787	ILMN_217787	POU2F2	NM_011138.1	NM_011138.1		18987	6755131	NM_011138.1	Pou2f2	NP_035268.1	ILMN_2687602	006370253	S	1702	GGAGGACCCGAGGCGGGGTCCAAGGCTGAGTGAGAGCCGGCCATGCCTCC	7	-	25877678-25877727	7qA3	Mus musculus POU domain, class 2, transcription factor 2 (Pou2f2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process whereby transitional stage B cells acquire the specialized features of mature B cells in the spleen [goid 2335] [evidence IMP]; The regulated release of immunoglobulins from a B cell or plasma cell during an immune response [goid 2380] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Oct-2; MGC124154; Otf2; Otf-2; Oct2b; Oct2a; MGC124155; MGC124156	Oct-2; MGC124154; Otf2; Otf-2; Oct2b; Oct2a; MGC124155; MGC124156
Mus musculus	Riken	ILMN_203618	ILMN_203618	A930038D06RIK	ri|A930038D06|PX00067K08|AK044739|4026					AK044739	A930038D06Rik		ILMN_1237138	007610762	S	3579	GAGGCACACAGGGAACATTGAGTGGATAGGACCAGAAAAGGGACTGCCTG										
Mus musculus	MEEBO	ILMN_193138	ILMN_193138	MT-ND4	scl0017719.1_1						mt-Nd4		ILMN_1241022	006250689	S	10	AACGGATCCACAGCCGTACTATAATCATGGCCCGAGGACTTCAAATGGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191764	ILMN_191764	SCL0002395.1_4	scl0002395.1_4	AK030714.1			26326702	AK030714.1	scl0002395.1_4		ILMN_2481962	005270523	S	18	CCTAGCTGTTCTGGAATTTTTTCTGTAGACCAGGCTGGTCTTGAACTCAG										
Mus musculus	RefSeq	ILMN_222072	ILMN_222072	PPYR1	NM_008919.2	NM_008919.2		19065	31543503	NM_008919.2	Ppyr1	NP_032945.2	ILMN_3001106	002710278	S	3359	AGGAGTGGTAGGGTTAGAGCTGGAGACATATTCCTGTACGAAGGCCTGGG	14	-	32973302-32973351	14qB	Mus musculus pancreatic polypeptide receptor 1 (Ppyr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with pancreatic polypeptide PP to initiate a change in cell activity [goid 1602] [evidence IDA]; Combining with gut peptide YY to initiate a change in cell activity [goid 1601] [evidence IDA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]	Y4; NYYR-D; Npy4r	Y4; NYYR-D; Npy4r
Mus musculus	RefSeq	ILMN_225635	ILMN_227746	ZMIZ2	NM_028601.2	NM_028601.2		52915	54607099	NM_028601.2	Zmiz2	NP_082877.2	ILMN_3163539	007320435	A	3787	TCTGGACTGGCCTGCGCCTTCCATGTGGTGTCTGCCCCTTACTGAGCACA	11	+	6305749-6305798	11qA1	Mus musculus zinc finger, MIZ-type containing 2 (Zmiz2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	R74931; 2410117E06Rik; RP23-198N14.8; D11Bwg0280e	R74931; 2410117E06Rik; RP23-198N14.8; D11Bwg0280e
Mus musculus	RefSeq	ILMN_227746	ILMN_227746	ZMIZ2	NM_028601.2	NM_028601.2		52915	54607099	NM_028601.2	Zmiz2	NP_082877.2	ILMN_3162729	003360349	I	570	AAGCCCCCCTGGTGGTTCCATGATGCCTGGTGTGGCAGGTGGCAGCTCTG	11	+	6296264-6296313	11qA1	Mus musculus zinc finger, MIZ-type containing 2 (Zmiz2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	R74931; 2410117E06Rik; RP23-198N14.8; D11Bwg0280e	R74931; 2410117E06Rik; RP23-198N14.8; D11Bwg0280e
Mus musculus	RefSeq	ILMN_239012	ILMN_239012	FBXL10	NM_001005866.1	NM_001005866.1		30841	54607023	NM_001005866.1	Fbxl10	NP_001005866.1	ILMN_3108770	001300347	A	4742	CCTCTCCCTCAGACTTGAGCCTTTACACTCAGGAGGGTTTGCTCCAAGCA	5	-	123320897-123320946	5qF	Mus musculus F-box and leucine-rich repeat protein 10 (Fbxl10), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA3014; E430001G17; PCCX2; KIAA3014; Fbl10; Cxxc2	mKIAA3014; E430001G17; PCCX2; KIAA3014; Fbl10; Cxxc2
Mus musculus	RefSeq	ILMN_194634	ILMN_194634	ZFP369	NM_178364.3	NM_178364.3		170936	46518502	NM_178364.3	Zfp369	NP_848141.2	ILMN_2857692	004670563	S	2517	CACCAGGCATGTGAGAATTCATACTGGGGAGCGACCTTATGTGTGTACCA	13	+	65312235-65312284	13qB3	Mus musculus zinc finger protein 369 (Zfp369), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B930030B22Rik; NRIF2; D230020H11Rik	B930030B22Rik; NRIF2; D230020H11Rik
Mus musculus	Riken	ILMN_204798	ILMN_204798	4833431P16RIK	ri|4833431P16|PX00028B16|AK029415|2424					AK029415	4833431P16Rik		ILMN_2567692	001580164	S	2084	GTCATACATCATGCTACTGTTGTCAGGGTGACTTTACAGTTCCTGGTGAC										
Mus musculus	RefSeq	ILMN_223817	ILMN_249542	TCFCP2L1	NM_023755.2	NM_023755.2		81879	134053938	NM_023755.2	Tcfcp2l1	NP_076244.2	ILMN_2769832	004280541	S	9084	GGTAGTCCAGACTGGTCAAATATGTGTGGCAGGTCACGGGAAAGGGAGTC	1	+	120581559-120581608	1qE2.3	Mus musculus transcription factor CP2-like 1 (Tcfcp2l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45927] [evidence IMP]; The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity [goid 7431] [evidence IMP]; The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2070] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 7028] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]	Any activity that stops or downregulates transcription of genes globally, and is not specific to a particular gene or gene set [goid 16565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4932442M07Rik; 1810030F05Rik; D930018N21Rik; LBP-9; Crtr-1; Cp2l1; AA575098	4932442M07Rik; 1810030F05Rik; D930018N21Rik; LBP-9; Crtr-1; Cp2l1; AA575098
Mus musculus	RefSeq	ILMN_194825	ILMN_242229	BCLAF1	NM_153787.2	NM_153787.2		72567	70906445	NM_153787.2	Bclaf1	NP_722482.1	ILMN_2703720	000360762	S	2904	CTCATGACAAATACCAAGGAGATGGGATTGTTGAAGATGACGAAGAGACC	10	+	20059633-20059682	10qA3	Mus musculus BCL2-associated transcription factor 1 (Bclaf1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISO]	AI450190; 2610102K23Rik; AW556225; Btf; mKIAA0164; 5730534O06Rik; 2700025J07Rik; MGC58035; MGC30519; KIAA0164; 2810454G14Rik	AI450190; 2610102K23Rik; AW556225; Btf; mKIAA0164; 5730534O06Rik; 2700025J07Rik; MGC58035; MGC30519; KIAA0164; 2810454G14Rik
Mus musculus	RefSeq	ILMN_194825	ILMN_242229	BCLAF1	NM_153787.2	NM_153787.2		72567	70906445	NM_153787.2	Bclaf1	NP_722482.1	ILMN_2668815	004070392	S	2693	GGTCCAAACAACTCAAATACCACTTTTCAAAAGAGACCGAAGGAAGAGGA	10	+	20054359-20054408	10qA3	Mus musculus BCL2-associated transcription factor 1 (Bclaf1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISO]	AI450190; 2610102K23Rik; AW556225; Btf; mKIAA0164; 5730534O06Rik; 2700025J07Rik; MGC58035; MGC30519; KIAA0164; 2810454G14Rik	AI450190; 2610102K23Rik; AW556225; Btf; mKIAA0164; 5730534O06Rik; 2700025J07Rik; MGC58035; MGC30519; KIAA0164; 2810454G14Rik
Mus musculus	Riken	ILMN_204078	ILMN_204078	A730022C13RIK	ri|A730022C13|PX00149L14|AK042764|1478					AK042764	A730022C13Rik		ILMN_1230581	002190343	S	1137	AGGGAAGTAGCTCACACCCTTAGCACTGGGAGGACCTCATCTACCCACAC										
Mus musculus	RefSeq	ILMN_242868	ILMN_242868	PKIB	NM_001039052.1	NM_001039052.1		18768	84794586	NM_001039052.1	Pkib	NP_001034141.1	ILMN_3052870	006200608	I	11	TAGTGGGTCTACTCCCCTTGGGAGGGACAGAACATCTTGGAAGAGTCCGG	10	+	57365685-57365734	10qB4	Mus musculus protein kinase inhibitor beta, cAMP dependent, testis specific (Pkib), transcript variant 4, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IEA]	Prkacn2; PKIbeta	Prkacn2; PKIbeta
Mus musculus	RefSeq	ILMN_208740	ILMN_208740	TIMD4	NM_178759.4	NM_178759.4		276891	110624775	NM_178759.4	Timd4	NP_848874.3	ILMN_2589057	003840367	S	1614	GGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTGAAGCTATCCA	11	+	46657274-46657323	11qB1.1	Mus musculus T-cell immunoglobulin and mucin domain containing 4 (Timd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Tim4; B430010N18Rik	Tim4; B430010N18Rik
Mus musculus	RefSeq	ILMN_210447	ILMN_210447	SKINT4	NM_178786.3	NM_178786.3		320640	142385268	NM_178786.3	Skint4	NP_848901.1	ILMN_1238115	003520626	S	1814	GTGGTTGTTAGGCTTGTTCTTCTTGTGAGAGTCTTAACAATGGGTGTGCG	4	+	111838498-111838547	4qD1	Mus musculus selection and upkeep of intraepithelial T cells 4 (Skint4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_185119	ILMN_249536	WIPI2	NM_178398.4	NM_178398.4		74781	146198762	NM_178398.4	Wipi2	NP_848485.1	ILMN_1240515	004180692	S	2075	GGATCATTCTGGGACTAGCTTCCTCCACGGGGGGACTGTTGTTCTGGGTC				5qG2	Mus musculus WD repeat domain, phosphoinositide interacting 2 (Wipi2), mRNA.				1110018O08Rik; 2510001I10Rik	1110018O08Rik; 2510001I10Rik
Mus musculus	RefSeq	ILMN_185119	ILMN_249536	WIPI2	NM_178398.4	NM_178398.4		74781	146198762	NM_178398.4	Wipi2	NP_848485.1	ILMN_2682516	002190612	S	3602	TAGGCTGTGACCTCAGGCAATCTGTACAGCACTCGCAGGCCTCAGGTGAG				5qG2	Mus musculus WD repeat domain, phosphoinositide interacting 2 (Wipi2), mRNA.				1110018O08Rik; 2510001I10Rik	1110018O08Rik; 2510001I10Rik
Mus musculus	RefSeq	ILMN_216636	ILMN_216636	FIP1L1	NM_024183.4	NM_024183.4		66899	141802634	NM_024183.4	Fip1l1	NP_077145.2	ILMN_1254883	002850619	S	1662	GACGTCGCCATGAAAGTGAAGAAGGGGACAGTCACAGAAGACACAAGCAC	5	+	74991872-74991921	5qC3.3	Mus musculus FIP1 like 1 (S. cerevisiae) (Fip1l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Rje; 1300019H17Rik	Rje; 1300019H17Rik
Mus musculus	RefSeq	ILMN_191429	ILMN_216636	FIP1L1	NM_024183.4	NM_024183.4		66899	141802634	NM_024183.4	Fip1l1	NP_077145.2	ILMN_1220581	006060075	S	1717	CTTTTTGTGCTTGTGTCTTCTGTGACTGTCCCCTTCTTCACTTTCATGGC	5	+	74991927-74991976	5qC3.3	Mus musculus FIP1 like 1 (S. cerevisiae) (Fip1l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Rje; 1300019H17Rik	Rje; 1300019H17Rik
Mus musculus	RefSeq	ILMN_216636	ILMN_216636	FIP1L1	NM_024183.4	NM_024183.4		66899	141802634	NM_024183.4	Fip1l1	NP_077145.2	ILMN_1259484	006760647	S	2603	GGTTAAACTCTGGACTAACCCCAAGAGGCATTCTAGAGCAGCGATGGGGC	5	+	74992813-74992862	5qC3.3	Mus musculus FIP1 like 1 (S. cerevisiae) (Fip1l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Rje; 1300019H17Rik	Rje; 1300019H17Rik
Mus musculus	RefSeq	ILMN_202809	ILMN_232059	PDE1C	NM_001025568.1	NM_001025568.1		18575	70909351	NM_001025568.1	Pde1c	NP_001020739.1	ILMN_1223293	000130224	S	5059	CACTATGGTCTCATCTCAGGACAGAGGGACTGATCCTTACGGAGTTGTGG	6	-	56054097-56054146	6qB3	Mus musculus phosphodiesterase 1C (Pde1c), transcript variant 2, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence ISO]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_232059	ILMN_232059	PDE1C	NM_001025568.1	NM_001025568.1		18575	70909351	NM_001025568.1	Pde1c	NP_001020739.1	ILMN_3141964	002970072	A	2232	CGTGGGAAGAACTCCAAAGGAGAAAAGGCAGGCGAAAAGCAGCAGAACGG	6	-	56073052-56073063:56076853-56076890	6qB3	Mus musculus phosphodiesterase 1C (Pde1c), transcript variant 2, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence ISO]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_204198	ILMN_232059	PDE1C	NM_001025568.1	NM_001025568.1		18575	70909351	NM_001025568.1	Pde1c	NP_001020739.1	ILMN_1223545	002360685	S	3064	TGTTAGCTGATGACCATATTGCCAGGCGGGTTCCCCAGTGCTGTGACTGG	6	-	56056092-56056141	6qB3	Mus musculus phosphodiesterase 1C (Pde1c), transcript variant 2, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence ISO]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_206415	ILMN_232059	PDE1C	NM_001025568.1	NM_001025568.1		18575	70909351	NM_001025568.1	Pde1c	NP_001020739.1	ILMN_1218467	005700301	S	3654	GTCCTTACGACCTCTTGGCTCACAGAAACAGGCTACAGCAGGAAGTCGGG	6	-	56055502-56055551	6qB3	Mus musculus phosphodiesterase 1C (Pde1c), transcript variant 2, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence ISO]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186346	ILMN_312956	4933439G19RIK	XM_001475681.1	XM_001475681.1		414080	149260959	XM_001475681.1	4933439G19Rik	XP_001475731.1	ILMN_1224494	007650326	S	131	CGCCTCACTCTCCGCTCAACTACCGGCAGATGGTCAATAGTGCTTTCCTC	10	+	81546137-81546186	10qC1	PREDICTED: Mus musculus RIKEN cDNA 4933439G19 gene (4933439G19Rik), mRNA.					
Mus musculus	Riken	ILMN_201790	ILMN_201790	2610015J01RIK	ri|2610015J01|ZX00055L03|AK011403|1064					AK011403	2610015J01Rik		ILMN_2544603	003710301	S	102	GGAGCCCCACTCCATCACCTGACGCCCAGAGGCCGCGAAGACAGTACCGT										
Mus musculus	MEEBO	ILMN_186053	ILMN_186053	CHURC1	scl00211151.1_32				51766898	XM_126982	Churc1		ILMN_1237006	005870592	S	20	GGGCCGCCCTGAGGAAGAGTTAAGTGCTTCTTTGCAGTTGGAGAAGGCGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]		
Mus musculus	MEEBO	ILMN_195688	ILMN_195688	HS3ST2	scl00195646.1_300				51761919	XM_112440	Hs3st2		ILMN_2532884	005820612	S	383	GCAGTCTAGGCCTGGTGGACGTGTCTTGGAACGCTATCCGCATTGGCATG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate; modifies selected glucosamine residues preceded by GlcA2S [goid 33871] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_202297	ILMN_202297	4933404A18RIK	ri|4933404A18|PX00019P07|AK016647|2316					AK016647	4933404A18Rik		ILMN_1257908	004200121	S	692	ACCGGGAAGACAAAGCATAGTTCCGAACAGATCAAAATGTATCTATTTCC										
Mus musculus	MEEBO	ILMN_193278	ILMN_193278	CYLN2	scl25944.17_344				6753561	NM_009990	Cyln2		ILMN_2630160	002450048	S	2854	GCCTGCGTGAGAAGCTGACCGGGCTGGACAAGGAGAAGTCCCTATCAGAG										
Mus musculus	RefSeq	ILMN_198792	ILMN_198792	LOC244111	XM_145880.1	XM_145880.1			20839877	XM_145880.1	LOC244111		ILMN_1232909	004040068	S	28	ACTGTGGGATGTGGGGAAGGAGCAGTCACACAGATCAGCCCTGTGCAGAG										
Mus musculus	RefSeq	ILMN_218806	ILMN_218806	1700011H14RIK	NM_025956.3	NM_025956.3		67082	142386951	NM_025956.3	1700011H14Rik	NP_080232.2	ILMN_1240624	007100053	S	925	GTGCTTAAGAAAGCTAGACGCTACCCCAGGTAGTAACGGCACAGAATGCC	14	-	49846198-49846240:49846241-49846247	14qC1	Mus musculus RIKEN cDNA 1700011H14 gene (1700011H14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_261967	ILMN_261967	ZFP365	NM_178679.2	NM_178679.2		216049	68448535	NM_178679.2	Zfp365	NP_848794.1	ILMN_2966034	006270372	S	3596	GGACAGCCCTCTTTGACAGTGGTCCATGCTCGTCTTTGGATATAACCTTG	10	-	67349464-67349513	10qB5.1	Mus musculus zinc finger protein 365 (Zfp365), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI839779; AV340892; talanin; Su48	AI839779; AV340892; talanin; Su48
Mus musculus	RefSeq	ILMN_222861	ILMN_222861	CD300LB	NM_199221.2	NM_199221.2		217304	80978940	NM_199221.2	Cd300lb	NP_954691.2	ILMN_1213393	002360360	S	408	CATGGAGATGCTCAGGCAAAATGACACGGACACTTACTGGTGTGGTATTG	11	-	114789658-114789707	11qE2	Mus musculus CD300 antigen like family member B (Cd300lb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	LMIR5; Clm7; Gm253	LMIR5; Clm7; Gm253
Mus musculus	RefSeq	ILMN_223295	ILMN_223295	PRKCA	NM_011101.2	NM_011101.2		18750	142364622	NM_011101.2	Prkca	NP_035231.1	ILMN_1217890	005910176	S	3087	GCCACTGTTCACGAGTGTTGTTAGCCAACCCCACACACACAATATTTTGC	11	-	107799973-107800022	11qE1	Mus musculus protein kinase C, alpha (Prkca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46325] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of insulin receptor signaling [goid 46627] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [evidence IMP]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IMP]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IMP]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IDA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol and calcium [goid 4698] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pkca	Pkca
Mus musculus	RefSeq	ILMN_258474	ILMN_258474	BC094916	NM_001024721.1	NM_001024721.1		545384	85701547	NM_001024721.1	BC094916	NP_001019892.1	ILMN_3072407	000460592	I	1437	GAAGGTCATCAAAGCTAGGAACTGAGAAACAACCACTCAGTTCTGCTTCC	1	-	175451744-175451790:175452964-175452966	1qH3	Mus musculus cDNA sequence BC094916 (BC094916), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_258474	ILMN_258474	BC094916	NM_001024721.1	NM_001024721.1		545384	85701547	NM_001024721.1	BC094916	NP_001019892.1	ILMN_3151243	001690292	A	938	TGCATATGACATGAAAGGAGAGAAGATGTTCCATGCCACCGTGGCTACGG	1	-	175455205-175455254	1qH3	Mus musculus cDNA sequence BC094916 (BC094916), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216905	ILMN_258474	BC094916	NM_001024721.1	NM_001024721.1		545384	85701547	NM_001024721.1	BC094916	NP_001019892.1	ILMN_1250523	007000576	S	1163	GAGGAAAAGCGCCAATCGAACACCTAAAATCAACTATCTTTGCTCAAAGA	1	-	175454980-175455029	1qH3	Mus musculus cDNA sequence BC094916 (BC094916), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197855	ILMN_316935	LOC279185	XR_035627.1	XR_035627.1		279185	149253243	XR_035627.1	LOC279185		ILMN_1247871	004060634	S	1020	TGTATCTTTCCCAGTGTCCAAGCACCCACCAGCTCAAACACCTGGATCTG				4qE1	PREDICTED: Mus musculus hypothetical LOC279185 (LOC279185), misc RNA.					
Mus musculus	RefSeq	ILMN_251402	ILMN_251402	HIST1H3G	NM_145073.2	NM_145073.2		97908	75991703	NM_145073.2	Hist1h3g	NP_659539.1	ILMN_3002290	004850040	S	414	GTCGCATCCGCGGGGAGAGGGCTTAAGGGTTTCTGTTAATCCACACAACC	13	+	23627700-23627725:23627726-23627749	13qA3.1	Mus musculus histone cluster 1, H3g (Hist1h3g), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	M32460; H3.1-221	M32460; H3.1-221
Mus musculus	RefSeq	ILMN_195563	ILMN_195563	UBB	NM_011664.3	NM_011664.3		22187	142351666	NM_011664.3	Ubb	NP_035794.1	ILMN_2516699	004780762	S	778	GTGGCATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCTTG	11	+	62366327-62366376	11qB2	Mus musculus ubiquitin B (Ubb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ubb2; AL033289	Ubb2; AL033289
Mus musculus	RefSeq	ILMN_222161	ILMN_222161	CHST1	NM_023850.1	NM_023850.1		76969	12963844	NM_023850.1	Chst1	NP_076339.1	ILMN_1255385	000430152	S	1972	GTCTGAGTCTTGTGGCTACCCCTAGACCAGTAATGGCTAATGAATCTTAG	2	+	92455224-92455273	2qE1	Mus musculus carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 (Chst1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + keratan = adenosine 3',5'-bisphosphate + keratan 6'-sulfate [goid 45130] [evidence IEA]	KSGAL6ST; GST-1; AW125896; Gst1; C6ST; 2610008E20Rik	KSGAL6ST; GST-1; AW125896; Gst1; C6ST; 2610008E20Rik
Mus musculus	RefSeq	ILMN_223342	ILMN_223342	ABHD6	NM_025341.3	NM_025341.3		66082	118130362	NM_025341.3	Abhd6	NP_079617.2	ILMN_2853619	006200240	S	1847	CCACCTCGGTCAGCCCTAAGAATTGACCAAGAGGGAGAACATACAGACTG	14	+	8888898-8888947	14qA1	Mus musculus abhydrolase domain containing 6 (Abhd6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AA673485; AV065425; 0610041D24Rik	AA673485; AV065425; 0610041D24Rik
Mus musculus	RefSeq	ILMN_198688	ILMN_198688	LOC333588	XM_285556.2	XM_285556.2			38086861	XM_285556.2	LOC333588		ILMN_2532572	003370278	S	944	CCAGGCAGTGTGGGACAGGGTTCAGAGACAGTGAAAGGTGGTCTGCTACA										
Mus musculus	RefSeq	ILMN_196594	ILMN_196594	GSTM6	NM_008184.1	NM_008184.1			7110612	NM_008184.1	Gstm6		ILMN_1246321	002940541	S	486	GTCCTTGATCAGCATCGAATGTTTGAACCCACGTGCCTGGACGCCTTCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215227	ILMN_215227	ZFP677	NM_172486.2	NM_172486.2		210503	113865955	NM_172486.2	Zfp677	NP_766074.2	ILMN_2656986	006420446	S	2853	TTAAATCATAGAAGAGTATCGAAGAGTTTATATTTAAATAAATTTCTGCA	17	+	21536170-21536219	17qA3.2	Mus musculus zinc finger protein 677 (Zfp677), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	A830058L05Rik; Tce8	A830058L05Rik; Tce8
Mus musculus	RefSeq	ILMN_204498	ILMN_316840	LOC100048706	XR_034914.1	XR_034914.1		100048706	149249739	XR_034914.1	LOC100048706		ILMN_1221233	005360452	S	348	TGCTGTGGAGCCAGTGGGATGGCTGAGCAGGTCGAAGCACTTGTTGCCAA					PREDICTED: Mus musculus similar to PKC-potentiated PP1 inhibitory protein (LOC100048706), misc RNA.					
Mus musculus	Riken	ILMN_204616	ILMN_204616	1200013F24RIK	ri|B230118M11|PX00068N08|AK045433|2735					AK045433	1200013F24Rik		ILMN_1245704	001170747	S	2209	CGTGGACTACGGAATGTTGAGTTCTTGAGTCTTGTTGGACTGCGTGTCCC										
Mus musculus	Riken	ILMN_206330	ILMN_206330	D330018I10RIK	ri|D330018I10|PX00191M14|AK084592|3649					AK084592	D330018I10Rik		ILMN_1229465	001770563	S	3449	AGGGGAGACACTCAGAGGTAACTTGCCCAAAGTCACACTGCTCCTACGTG										
Mus musculus	RefSeq	ILMN_187649	ILMN_228444	XYLB	NM_001033209.2	NM_001033209.2		102448	118131121	NM_001033209.2	Xylb	NP_001028381.1	ILMN_2445926	000670079	S	2943	GGCAGAGCACAGATGGAAAGAGAGTTGTGTGTAGACATGAGGTCGCTTGG	9	+	119301998-119302047	9qF3	Mus musculus xylulokinase homolog (H. influenzae) (Xylb), mRNA. XM_902953 XM_902954 XM_916628 XM_924356 XM_924359 XM_924362 XM_924365		The chemical reactions and pathways involving D-xylose, a naturally occurring plant polysaccharide [goid 42732] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the reaction: ATP + D-xylulose = ADP + D-xylulose 5-phosphate [goid 4856] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AI132223; AI327421	AI132223; AI327421
Mus musculus	RefSeq	ILMN_232577	ILMN_232577	LRRN4CL	NM_001013019.2	NM_001013019.2		68852	115311555	NM_001013019.2	Lrrn4cl	NP_001013037.1	ILMN_2943270	005670273	S	2166	GGGCTGGAGGAGACAGGGCCCAAGCTTCTGGCTACATAAGTTAGTGGTCT	19	+	8927982-8928031	19qA	Mus musculus LRRN4 C-terminal like (Lrrn4cl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC130184; MGC130183	MGC130184; MGC130183
Mus musculus	RefSeq	ILMN_184144	ILMN_259921	ITK	NM_010583.2	NM_010583.2		16428	119703750	NM_010583.2	Itk	NP_034713.2	ILMN_2613422	006180154	S	3928	CTCTCTTAACCTCACATGCACGAAGGCTTTGATGGACGCGTGTGCACTGC	11	-	46138946-46138995	11qB1.1	Mus musculus IL2-inducible T-cell kinase (Itk), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	Tcsk; Emt; Tsk	Tcsk; Emt; Tsk
Mus musculus	Riken	ILMN_203965	ILMN_203965	A530016E13RIK	ri|A530016E13|PX00140E18|AK040698|1376					AK040698	A530016E13Rik		ILMN_1232222	002600753	S	1270	CAGGCAGCAAGCGCACCCCATATACTACACACACAGGCAGCAAGCACACC										
Mus musculus	MEEBO	ILMN_223990	ILMN_223990	MS4A6C	scl53358.2.1_26				13386329	NM_028595	Ms4a6c		ILMN_2772710	003870048	S	196	TGACCAATGAGACCATCACAACGATTTCACCAAATGGAATCAACTTTCCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194310	ILMN_194310	TMEM165	NM_011626.2	NM_011626.2		21982	111154066	NM_011626.2	Tmem165	NP_035756.2	ILMN_2505283	004230647	S	1344	TGTAAGTTTGACCCACTTAATTATTATGCCCAAAAGATATAATCATTGAT	5	+	76628303-76628307:76628370-76628414	5qC3.3	Mus musculus transmembrane protein 165 (Tmem165), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tpardl; AV026557; Tparl; pFT27	Tpardl; AV026557; Tparl; pFT27
Mus musculus	MEEBO	ILMN_193757	ILMN_193757	RFX5	scl22898.10_430				8394176	NM_017395	Rfx5		ILMN_1237656	005490286	S	1923	CTTCAAAGTTCCCTAACCCCTGAGCATAAAGACCCCAAAGCAACACCCCC							Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]			
Mus musculus	Riken	ILMN_206193	ILMN_206193	GPLD1	ri|B930088F07|PX00166D08|AK081107|2893					AK081107	Gpld1		ILMN_1227756	003290487	S	2704	AAAAGACGGACCAGGCACCCAGGATGTTACCCATGAGGTTGCTGCCGAGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	 [goid 6507] [evidence IDA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: glycoprotein phosphatidylinositol + H2O = phosphatidate + glycoprotein inositol [goid 4621] [evidence IEA]; Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [evidence IDA]		
Mus musculus	MEEBO	ILMN_191126	ILMN_191126	2310051F07RIK	scl9887.1.1_12						2310051F07Rik		ILMN_2476341	005340609	S	13	GCTACGAGGGCCTGTTTCAGATGGTACTCTGTATGTCATGGACATGTTTG										
Mus musculus	Riken	ILMN_204019	ILMN_204019	A630072I12RIK	ri|A630072I12|PX00147B16|AK042223|1837					AK042223	A630072I12Rik		ILMN_2561749	003780162	S	1206	GTCATGCCCAGAGGCCCATCTTCCAGGCGATTCTAACGTCTACCTGTTGG										
Mus musculus	RefSeq	ILMN_208789	ILMN_208789	CLK2	NM_007712.2	NM_007712.2		12748	142385060	NM_007712.2	Clk2	NP_031738.1	ILMN_1238520	002370093	S	1476	GCCACCCAACACCAAGTTGTGGGACTCCAGTCGGGATATCAGTCGGTGAC	3	+	88980453-88980501:88980502-88980502	3qF1	Mus musculus CDC-like kinase 2 (Clk2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]	AU041688	AU041688
Mus musculus	RefSeq	ILMN_208789	ILMN_208789	CLK2	NM_007712.2	NM_007712.2		12748	142385060	NM_007712.2	Clk2	NP_031738.1	ILMN_1237842	006960382	S	442	AAGAGTGTAGAGGACGACGCTGAGGGCCACCTCATCTACCACGTCGGGGA	3	+	88973558-88973607	3qF1	Mus musculus CDC-like kinase 2 (Clk2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]	AU041688	AU041688
Mus musculus	RefSeq	ILMN_198093	ILMN_244205	EG665210	XM_912619.2	XM_912619.2		665210	149268995	XM_912619.2	EG665210	XP_917712.2	ILMN_2588073	001110014	S	1880	CAGTGGTTCTTGCTTTTAAGGTCAGTTTTCCAGGGCGAATAGTAAGGTGG				17qA3.2	PREDICTED: Mus musculus predicted gene, EG665210 (EG665210), mRNA.					
Mus musculus	RefSeq	ILMN_209443	ILMN_256539	JHDM1D	NM_001033430.2	NM_001033430.2		338523	142374237	NM_001033430.2	Jhdm1d	NP_001028602.1	ILMN_2612880	005390189	S	1164	TTCCTTTCTTTGAAGCCATATGCTGGTTTGTAGCCAAAAGTTTGCTGGAA	6	-	39115105-39115154	6qB1	Mus musculus jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae) (Jhdm1d), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A630082K20Rik; mKIAA1718; BB041802	A630082K20Rik; mKIAA1718; BB041802
Mus musculus	Riken	ILMN_202721	ILMN_202721	ACP1	ri|2610318K05|ZX00062D05|AK019186|765					AK019186	Acp1		ILMN_1234387	003710239	S	188	GGCCCCCAGACCCAAGAGCTGTCAGCTGCCTAAGAAATCATGGCATTAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA];  [goid 4726] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211902	ILMN_211902	ATG16L1	NM_029846.3	NM_029846.3		77040	142350336	NM_029846.3	Atg16l1	NP_084122.2	ILMN_2620574	006380338	S	2777	CCGTGCACATGGTCTGAGCGCCACGTTTGTCTGTCACACTTACTTTGCAC	1	+	89688708-89688757	1qD	Mus musculus autophagy-related 16-like 1 (yeast) (Atg16l1), transcript variant b, mRNA.	A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	WDR30; AI225866; 1500009K01Rik; Atg16l; Apg16l; AI035639	WDR30; AI225866; 1500009K01Rik; Atg16l; Apg16l; AI035639
Mus musculus	Riken	ILMN_205018	ILMN_205018	A230055A07RIK	ri|A230055A07|PX00128G12|AK038686|2745					AK038686	A230055A07Rik		ILMN_1256754	004890632	S	2453	TGACTAGGCACATACACATCTATATCACTCCTCCTTACTCTCCTATGCAG										
Mus musculus	MEEBO	ILMN_212913	ILMN_212913	DNAJB11	scl49316.10.1_12	XM_148071.1			20892116	XM_148071.1	Dnajb11		ILMN_2631576	001570279	S	1337	GCAAGTTTGGCTTAGTCCTTTTTTCCCTGATGACCGTCCTGACAAGAACT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically [goid 16556] [evidence IDA]; The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically [goid 16556] [evidence ISO]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with an unfolded protein [goid 51082] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214270	ILMN_214270	5830443L24RIK	NM_029509.4	NM_029509.4		76074	115292436	NM_029509.4	5830443L24Rik	NP_083785.3	ILMN_2646187	006760435	S	1614	ATTATAAGAGAAGTTGCTTCATTTATTTTTTCTCCCATTTCAATGATTGA	5	-	105443967-105443967:105443968-105444016	5qE5	Mus musculus RIKEN cDNA 5830443L24 gene (5830443L24Rik), mRNA.				mGBP8	mGBP8
Mus musculus	RefSeq	ILMN_184296	ILMN_262008	NFATC1	NM_016791.3	NM_016791.3		18018	118131200	NM_016791.3	Nfatc1	NP_058071.2	ILMN_2647739	005220541	S	22	GCTGGAGCAGGACCCGGAGTTCGACTTCGATTTCCTCTTCGAGTTCGATC	18	-	80904799-80904848	18qE3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (Nfatc1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	NFATc; NFAT2; 2210017P03Rik; Nfatcb; NF-ATc; AV076380; AI449492	NFATc; NFAT2; 2210017P03Rik; Nfatcb; NF-ATc; AV076380; AI449492
Mus musculus	RefSeq	ILMN_184296	ILMN_262008	NFATC1	NM_016791.3	NM_016791.3		18018	118131200	NM_016791.3	Nfatc1	NP_058071.2	ILMN_1224430	002570577	S	2798	GCAGAGTCGGTTGTTATCCTGAGTTCTATTGTATTTTGAGTAAGCTAGGC	18	-	80845789-80845838	18qE3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (Nfatc1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	NFATc; NFAT2; 2210017P03Rik; Nfatcb; NF-ATc; AV076380; AI449492	NFATc; NFAT2; 2210017P03Rik; Nfatcb; NF-ATc; AV076380; AI449492
Mus musculus	RefSeq	ILMN_216924	ILMN_216924	DHX16	NM_026987.1	NM_026987.1		69192	30794425	NM_026987.1	Dhx16	NP_081263.1	ILMN_2677016	000010474	S	3177	TGCTAAGAAAATGCCCAAAAAAGTCGGCAAGACACGAGAAGAGCTGGGCT	17	+	36029441-36029490	17qB1	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 16 (Dhx16), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Ddx16; DBP2; mKIAA0577; 2410006N22Rik	Ddx16; DBP2; mKIAA0577; 2410006N22Rik
Mus musculus	RefSeq	ILMN_229246	ILMN_229246	FOXR1	NM_001033469.2	NM_001033469.2		382074	142388011	NM_001033469.2	Foxr1	NP_001028641.1	ILMN_3162291	001660195	S	1367	GATCCCAGCACTCAGGATTCAGAGGTAGGAGGAGGGCCAGGGGTTTAAGG	9	-	44242566-44242615	9qA5.2	Mus musculus forkhead box R1 (Foxr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Foxn5; Gm1115	Foxn5; Gm1115
Mus musculus	RefSeq	ILMN_223789	ILMN_245402	TCFCP2	NM_033476.2	NM_033476.2		21422	118130825	NM_033476.2	Tcfcp2	NP_258437.1	ILMN_2769178	004230014	S	2859	GTGCATGTACAGAATTGTAAAGCACTTAGGCCCTCCTTTTTCACATGAAG	15	-	100333510-100333559	15qF1	Mus musculus transcription factor CP2 (Tcfcp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence TAS]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	CP-2; LSF; LBP-1c; UBP-1; LBP-1d	CP-2; LSF; LBP-1c; UBP-1; LBP-1d
Mus musculus	MEEBO	ILMN_185638	ILMN_185638	IGKV11-125_AJ231256_IG_KAPPA_VARIABLE_11-125_15	IGKV11-125_AJ231256_Ig_kappa_variable_11-125_15						IGKV11-125_AJ231256_Ig_kappa_variable_11-125_15		ILMN_1216747	006580204	S	1	CCTGCTGAGTTCCTTGGGTTCCTGTTGCTCTGGTTTTTAGGTGCCAGATG										
Mus musculus	RefSeq	ILMN_238585	ILMN_238585	ADORA1	NM_001008533.2	NM_001008533.2		11539	87239997	NM_001008533.2	Adora1	NP_001008533.1	ILMN_3065420	002940026	I	904	TGGCCAGCTTGGGCAGGCACTGCATCACTTTACTGGGGCACATCTTCGCA	1	-	136131051-136131100	1qE4	Mus musculus adenosine A1 receptor (Adora1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IEA]	A1AR; A1R; BB176431; AI848715	A1AR; A1R; BB176431; AI848715
Mus musculus	RefSeq	ILMN_238585	ILMN_238585	ADORA1	NM_001008533.2	NM_001008533.2		11539	87239997	NM_001008533.2	Adora1	NP_001008533.1	ILMN_3143358	005080100	A	5581	GGCTGATGTTAAAGAGTATGGCTTCTAGGGTGAGTGAGGTGGCTCAGCGG	1	-	136095950-136095999	1qE4	Mus musculus adenosine A1 receptor (Adora1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IEA]	A1AR; A1R; BB176431; AI848715	A1AR; A1R; BB176431; AI848715
Mus musculus	RefSeq	ILMN_216964	ILMN_238585	ADORA1	NM_001008533.2	NM_001008533.2		11539	87239997	NM_001008533.2	Adora1	NP_001008533.1	ILMN_1254016	007510408	S	3332	TTCAGTTGGAGGTAAGGTGTCCCTGGCTCTCAAGGAGGACCCTATGTCTA	1	-	136098199-136098248	1qE4	Mus musculus adenosine A1 receptor (Adora1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IEA]	A1AR; A1R; BB176431; AI848715	A1AR; A1R; BB176431; AI848715
Mus musculus	RefSeq	ILMN_223257	ILMN_238585	ADORA1	NM_001008533.2	NM_001008533.2		11539	87239997	NM_001008533.2	Adora1	NP_001008533.1	ILMN_2761495	003710224	S	4956	GCCCAGCCCCTTTGATTCTGGGGTCTACACTTGCAAGGCCATCAACGTGC	1	-	136096575-136096624	1qE4	Mus musculus adenosine A1 receptor (Adora1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IEA]	A1AR; A1R; BB176431; AI848715	A1AR; A1R; BB176431; AI848715
Mus musculus	RefSeq	ILMN_190689	ILMN_311343	LOC100047693	XM_001478695.1	XM_001478695.1		100047693	149267884	XM_001478695.1	LOC100047693	XP_001478745.1	ILMN_1221961	004920673	S	1844	GAAGGGTGTTCTAACAAATGTTTATTCTTAGACCTGAGAGACACTGAGGC					PREDICTED: Mus musculus similar to cell adhesion molecule nectin-3 beta (LOC100047693), mRNA.					
Mus musculus	RefSeq	ILMN_224054	ILMN_224430	MMP17	NM_011846.4	NM_011846.4		23948	118130008	NM_011846.4	Mmp17	NP_035976.3	ILMN_2773800	003440053	S	3416	GCTGGAGCTGTCTAGATGCTGGTGTCACACTCATTTTAAAACCCAAACTC	5	+	130114013-130114062	5qG1.3	Mus musculus matrix metallopeptidase 17 (Mmp17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MT4-MMP	MT4-MMP
Mus musculus	RefSeq	ILMN_214209	ILMN_240915	1700013D24RIK	XM_989548.2	XM_989548.2		76921	149255423	XM_989548.2	1700013D24Rik	XP_994642.1	ILMN_2645544	001470037	S	436	GTCACAGAAAGGTGCTTCTAGCATTCTCATCATTATTTATACTTAAGCGA	6	-	124297643-124297692	6qF2	PREDICTED: Mus musculus RIKEN cDNA 1700013D24 gene (1700013D24Rik), mRNA.					
Mus musculus	Riken	ILMN_205287	ILMN_205287	4833419P04RIK	ri|4833419P04|PX00313F21|AK029383|947					AK029383	4833419P04Rik		ILMN_1221176	001070164	S	583	CCAGGTGGACTTGACTGTTCAGGGTCTCAGTAGAGCTGATAATCCCTTGC										
Mus musculus	RefSeq	ILMN_209373	ILMN_209373	AA986860	NM_177604.2	NM_177604.2		212439	31341131	NM_177604.2	AA986860	NP_808272.1	ILMN_2595232	005490703	S	2793	GCAGAGTGGCCAAACCTGAGAAGCAAAGTCAAAGGACACAAAGGATGCAG	1	+	132640786-132640835	1qE4	Mus musculus expressed sequence AA986860 (AA986860), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	E030025M07; MGC156398	E030025M07; MGC156398
Mus musculus	RefSeq	ILMN_212819	ILMN_253058	5530400B04RIK	NM_027788.1	NM_027788.1		71405	110350661	NM_027788.1	5530400B04Rik	NP_082064.1	ILMN_2630707	002140747	S	1278	CTGTATCGTCAACTTTCAGATCCCAACCATATCTCCCCTCCTGGACCCTA	2	-	155655927-155655976	2qH1	Mus musculus RIKEN cDNA 5530400B04 gene (5530400B04Rik), mRNA.				MGC133000; MGC133001	MGC133000; MGC133001
Mus musculus	RefSeq	ILMN_198541	ILMN_198541	LOC236729	XM_141658.1	XM_141658.1			20983317	XM_141658.1	LOC236729		ILMN_1234950	000620368	S	46	GCATCCAGGAAAGAACTGCCTACAAAAGCCGCTCGCAAAAGGGCATCCTC										
Mus musculus	Riken	ILMN_201782	ILMN_201782	2210409B11RIK	ri|2210409B11|ZX00054C16|AK008865|844					AK008865	2210409B11Rik		ILMN_2544543	003060475	S	491	CTTGAATCGCTCTCAGAAATCTCGGCATCAGTGCCCGCCCCGTAGACTTT										
Mus musculus	RefSeq	ILMN_201143	ILMN_201143	LOC384865	XM_357905.1	XM_357905.1			38089442	XM_357905.1	LOC384865		ILMN_2541244	001090209	S	549	GCATCACTATGATGACCTCACAGGTGTGCAGGCTCTCACCACAGACCCTA										
Mus musculus	RefSeq	ILMN_213914	ILMN_213914	ANGPT2	NM_007426.3	NM_007426.3		11601	118131014	NM_007426.3	Angpt2	NP_031452.2	ILMN_1234487	003120278	S	2383	GCGCCATGTTGGTGAATGCGGAGACTGTACTATTTTGTTTTCTTCCTGGC	8	-	18691379-18691428	8qA1.3	Mus musculus angiopoietin 2 (Angpt2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IDA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any vascular endothelial growth factor receptor [goid 5172] [evidence TAS]	Agpt2; Ang-2; Ang2	Agpt2; Ang-2; Ang2
Mus musculus	RefSeq	ILMN_213914	ILMN_213914	ANGPT2	NM_007426.3	NM_007426.3		11601	118131014	NM_007426.3	Angpt2	NP_031452.2	ILMN_2642165	005820685	S	589	AAGAAGGAGATGGTGGAGATCCAACAGAATGTGGTGCAGAACCAGACAGC	8	-	18714159-18714208	8qA1.3	Mus musculus angiopoietin 2 (Angpt2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IDA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any vascular endothelial growth factor receptor [goid 5172] [evidence TAS]	Agpt2; Ang-2; Ang2	Agpt2; Ang-2; Ang2
Mus musculus	RefSeq	ILMN_219812	ILMN_219812	PTGER3	NM_011196.2	NM_011196.2		19218	86355515	NM_011196.2	Ptger3	NP_035326.2	ILMN_2713866	006450521	S	1862	TGCTATTTTTGAATTACTATCTACTTAAGATTTCTCATAATTTGTGCTCA	3	+	157307566-157307615	3qH4	Mus musculus prostaglandin E receptor 3 (subtype EP3) (Ptger3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of renal water excretion [goid 30146] [evidence IMP]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IDA]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a prostaglandin (PG) to initiate a change in cell activity [goid 4955] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IDA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IMP]	Ptgerep3; Pgerep3; EP3	Ptgerep3; Pgerep3; EP3
Mus musculus	MEEBO	ILMN_188629	ILMN_188629	B230112C05RIK	scl00320557.1_56						B230112C05Rik		ILMN_2454317	001090563	S	15	GTGTACTACCAGAAGTTTAGTTCTACTTTCAAACTTAAACTGTTAGACCA										
Mus musculus	RefSeq	ILMN_211683	ILMN_211683	DCUN1D5	NM_029775.2	NM_029775.2		76863	118130656	NM_029775.2	Dcun1d5	NP_084051.1	ILMN_1238285	006980162	S	1086	CATGTGATGGGCATTGAGCCACATGTCTTCTGAGACTGAATATTGACATT	9	+	7206916-7206965	9qA1	Mus musculus DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) (Dcun1d5), mRNA.				4833420K19Rik; 3110001A18Rik	4833420K19Rik; 3110001A18Rik
Mus musculus	RefSeq	ILMN_221877	ILMN_221877	MAF1	NM_026859.2	NM_026859.2		68877	31982639	NM_026859.2	Maf1	NP_081135.2	ILMN_2741538	003180296	S	1617	GTGGGCCACATGCACTGAGTGTCACTTTGCTGCAGCTCATTTGTTTCCAA	15	+	76184734-76184783	15qD3	Mus musculus MAF1 homolog (S. cerevisiae) (Maf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase III promoter [goid 16480] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	1110068E11Rik; AU042856	1110068E11Rik; AU042856
Mus musculus	RefSeq	ILMN_224043	ILMN_320974	LOC100047285	XM_001477507.1	XM_001477507.1		100047285	149269087	XM_001477507.1	LOC100047285	XP_001477557.1	ILMN_2773633	007200753	S	1014	GATGAGGATAGGTCGGCTTTGGTCACGATTCCAGAGTGGACGGCCAGGGT					PREDICTED: Mus musculus similar to implantation serine proteinase 2 (LOC100047285), mRNA.					
Mus musculus	RefSeq	ILMN_209750	ILMN_209750	RANBP1	NM_011239.2	NM_011239.2		19385	153792000	NM_011239.2	Ranbp1	NP_035369.2	ILMN_2598852	001940348	S	686	CCCTTTCAGTGAGGGAGGCCAGAGAGGAGGCTGAAGAGAAGTCTGAGGAG				16qA3	Mus musculus RAN binding protein 1 (Ranbp1), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances within a cell [goid 46907] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of centrosome separation [goid 46604] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	Htf9a	Htf9a
Mus musculus	RefSeq	ILMN_222023	ILMN_222023	CORO1B	NM_011778.1	NM_011778.1		23789	6753493	NM_011778.1	Coro1b	NP_035908.1	ILMN_2788546	003840092	S	1765	TGCCCAACCCACTGCCCCCTCACCAGAAAAAGCAGCAGAGATGGGGTCTA	19	+	4153953-4154002	19qA	Mus musculus coronin, actin binding protein 1B (Coro1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223349	ILMN_223349	EFHD2	NM_025994.3	NM_025994.3		27984	141803228	NM_025994.3	Efhd2	NP_080270.2	ILMN_1256246	001190020	S	2193	GTGTGTGTGGTTTTTGATGACTAACTAGAAACAAAGGTGGACAGGATCAG	4	-	141414195-141414244	4qE1	Mus musculus EF hand domain containing 2 (Efhd2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2600015J22Rik; D4Wsu27e; AA408606	2600015J22Rik; D4Wsu27e; AA408606
Mus musculus	RefSeq	ILMN_230254	ILMN_230254	SPINK6	NM_001013797.1	NM_001013797.1		433180	85701487	NM_001013797.1	Spink6	NP_001013819.1	ILMN_2996983	001050373	S	177	CAAGATCAGAGGGCCGATTTCCAGGGAAAGGTGTCTTAAGGCATCGTCTC	18	+	44239779-44239828	18qB3	Mus musculus serine peptidase inhibitor, Kazal type 6 (Spink6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	RefSeq	ILMN_230254	ILMN_230254	SPINK6	NM_001013797.1	NM_001013797.1		433180	85701487	NM_001013797.1	Spink6	NP_001013819.1	ILMN_2996988	001580201	S	248	TTCCGTGACCCCAAGGTCTTCTGCACTAGGGAATCTGACCCACTCTGCGG	18	+	44241910-44241959	18qB3	Mus musculus serine peptidase inhibitor, Kazal type 6 (Spink6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198335	ILMN_311669	LOC232745	XR_033673.1	XR_033673.1		232745	149255008	XR_033673.1	LOC232745		ILMN_1216048	006580446	S	676	AGTGACAGATATAAAGAGATCCCTTGCCACTGGGGTGGCAACGTCCTGGG				6qB2.1	PREDICTED: Mus musculus similar to 60S ribosomal protein L7a (Surfeit locus protein 3) (LOC232745), misc RNA.					
Mus musculus	RefSeq	ILMN_216981	ILMN_216981	CYP2C39	NM_010003.1	NM_010003.1		13098	6857776	NM_010003.1	Cyp2c39	NP_034133.1	ILMN_2677792	004830044	S	1507	CCTTCTGCAATCCTGTCCAGGTCTTTATTTACCTCTTTACTTATCAGGAA	19	+	39642718-39642767	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 39 (Cyp2c39), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220856	ILMN_325302	LOC100046395	XR_032392.1	XR_032392.1		100046395	149258805	XR_032392.1	LOC100046395		ILMN_2727785	001050538	S	744	TCTTGGGAGGTTTGGAGAAACTCTTGAGGTAGCACATGCCGTTGTGTTTC					PREDICTED: Mus musculus similar to carbonic reductase 4 (LOC100046395), misc RNA.					
Mus musculus	RefSeq	ILMN_221093	ILMN_221093	PAH	NM_008777.2	NM_008777.2		18478	142367614	NM_008777.2	Pah	NP_032803.1	ILMN_2731024	001980328	S	1601	CAGTGGTAGATCCTTCAGAGTCACATTTGATTTAGATATCTCAGACCTTC	10	+	87046514-87046563	10qC1	Mus musculus phenylalanine hydroxylase (Pah), mRNA.		The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with an amino acid, organic acids containing one or more amino substituents [goid 16597] [evidence IEA]; Catalysis of the reaction: L-phenylalanine + tetrahydrobiopterin + O2 = L-tyrosine + 4-alpha-hydroxytetrahydrobiopterin [goid 4505] [evidence IMP]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AW106920	AW106920
Mus musculus	RefSeq	ILMN_192927	ILMN_236021	AI848100	XM_975051.2	XM_975051.2		226551	149245255	XM_975051.2	AI848100	XP_980145.1	ILMN_2492627	002970722	S	6280	GCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTCTTGCCAGGAGCAAA	1	-	163746565-163746614	1qH2.1	PREDICTED: Mus musculus expressed sequence AI848100 (AI848100), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_196326	ILMN_236021	AI848100	XM_975051.2	XM_975051.2		226551	149245255	XM_975051.2	AI848100	XP_980145.1	ILMN_1242378	003710593	S	4673	GCCCAGTTCCTTGGGTGGATAGGAACGAAAGCCTAAACCTCTCCTTCAGC	1	-	163748172-163748221	1qH2.1	PREDICTED: Mus musculus expressed sequence AI848100 (AI848100), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_259223	ILMN_259223	CCDC102A	NM_001033533.1	NM_001033533.1		234582	75677622	NM_001033533.1	Ccdc102a	NP_001028705.1	ILMN_2849708	000990372	S	1496	ACTCAAGAAGCAGTTTCAAGAGAAGGTGGCCGAGCTGGCACACGCCCATC	8	-	97429920-97429969	8qD1	Mus musculus coiled-coil domain containing 102A (Ccdc102a), mRNA.				Gm586; BC027663	Gm586; BC027663
Mus musculus	MEEBO	ILMN_185344	ILMN_185344	PSMB8	scl0001632.1_8				6755207	NM_010724	Psmb8		ILMN_1226683	002570095	S	1	ATCTTCGGGGCCAAGTGGTCATGGCGTTACTGGATCTGTGCGGTGCCGCT						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]		
Mus musculus	RefSeq	ILMN_237514	ILMN_237514	SSTR5	NM_011425.1	NM_011425.1		20609	74315982	NM_011425.1	Sstr5	NP_035555.1	ILMN_2962473	005050544	S	2382	GCAGCTTCTCTACGCCAGACCCAGAATGTGCTCAAAGCCCCCATGTCCAC	17	-	25217741-25217790	17qA3.3	Mus musculus somatostatin receptor 5 (Sstr5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [evidence IEA]	sst5; Smstr5	sst5; Smstr5
Mus musculus	RefSeq	ILMN_213843	ILMN_213843	DDX5	NM_007840.3	NM_007840.3		13207	142378584	NM_007840.3	Ddx5	NP_031866.2	ILMN_2747168	005340136	S	2260	GTACAGTGATTTCAAATACAATAAATGAAGGCAATGCATGGCCTTCCAAT	11	-	106642880-106642929	11qE1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IDA]	2600009A06Rik; HUMP68; Hlr1; p68; MGC118083; G17P1	2600009A06Rik; HUMP68; Hlr1; p68; MGC118083; G17P1
Mus musculus	RefSeq	ILMN_213843	ILMN_213843	DDX5	NM_007840.3	NM_007840.3		13207	142378584	NM_007840.3	Ddx5	NP_031866.2	ILMN_1215167	002900224	S	94	GTCGCCGAGGCCTTCTCTCCGCGACTCGTCGCCGCAGGATTCTACTTTCA	11	-	106649665-106649714	11qE1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IDA]	2600009A06Rik; HUMP68; Hlr1; p68; MGC118083; G17P1	2600009A06Rik; HUMP68; Hlr1; p68; MGC118083; G17P1
Mus musculus	RefSeq	ILMN_258021	ILMN_258021	OLFR94	NM_001011518.1	NM_001011518.1		258219	58372121	NM_001011518.1	Olfr94	NP_001011518.1	ILMN_3160479	002070484	S	1105	AACAAGGAAGTGAAGGGGGCGGCACTGAGGCTCTTGCGGAGTCTGGGGAG	17	-	37380678-37380727	17qB1	Mus musculus olfactory receptor 94 (Olfr94), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-32P	MOR256-32P
Mus musculus	RefSeq	ILMN_210083	ILMN_252493	ERO1L	NM_015774.2	NM_015774.2		50527	15718668	NM_015774.2	Ero1l	NP_056589.1	ILMN_1224622	000780692	S	1685	CCCTTATGATAAAGCTAGGTAAATATTGCCTTAGGCTCTCAAACTAGAGT	14	-	45905400-45905449	14qC1	Mus musculus ERO1-like (S. cerevisiae) (Ero1l), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISO]	The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Oxidation of two organic sulfhydryl groups (thiols) by a disulfide compound to form a disulfide bond [goid 6467] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence ISO]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IDA]	Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide [goid 16671] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210083	ILMN_252493	ERO1L	NM_015774.2	NM_015774.2		50527	15718668	NM_015774.2	Ero1l	NP_056589.1	ILMN_2727376	006650725	S	3032	TATTTAGTATACGTTAAGTGATGGTGATGTAGCTTGTTTAGTAATGTATC	14	-	45904053-45904102	14qC1	Mus musculus ERO1-like (S. cerevisiae) (Ero1l), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISO]	The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Oxidation of two organic sulfhydryl groups (thiols) by a disulfide compound to form a disulfide bond [goid 6467] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence ISO]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IDA]	Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide [goid 16671] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IDA]		
Mus musculus	RefSeq	ILMN_193919	ILMN_246559	ZFP143	NM_009281.3	NM_009281.3		20841	121247389	NM_009281.3	Zfp143	NP_033307.2	ILMN_1214416	005130661	S	2152	GTGTACATAGCCCCGGAATGAAATCCCAACGTGATTCATTGTGTACGAGG	7	+	117226755-117226804	7qF1	Mus musculus zinc finger protein 143 (Zfp143), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	KRAB14; SBF; Zfp80-rs1; Zfp79; Staf; pHZ-1; D7Ertd805e; AU015869; AA959806	KRAB14; SBF; Zfp80-rs1; Zfp79; Staf; pHZ-1; D7Ertd805e; AU015869; AA959806
Mus musculus	RefSeq	ILMN_208671	ILMN_231511	SLCO6B1	NM_001039475.1	NM_001039475.1		67854	87080818	NM_001039475.1	Slco6b1	NP_001034564.1	ILMN_2588432	003390255	S	2381	GGCAATGCTATAATTTCATAAGAGAAAATTATCATAAAAGTATCTATTCA	1	-	98802797-98802846	1qD	Mus musculus solute carrier organic anion transporter family, member 6b1 (Slco6b1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISO]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISO]	1700022M03Rik	1700022M03Rik
Mus musculus	RefSeq	ILMN_210911	ILMN_210911	SERPINB9G	NM_011455.2	NM_011455.2		93806	31340615	NM_011455.2	Serpinb9g	NP_035585.1	ILMN_2610470	002710523	S	1784	AACAAATAGTTTGGACTACCAGATGCCCTCCATGCAAAACTCATGCTTCT	13	+	33587730-33587779	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 9g (Serpinb9g), mRNA.				NK21B; RP23-41L21.3; 1600002F03Rik; AW545779	NK21B; RP23-41L21.3; 1600002F03Rik; AW545779
Mus musculus	RefSeq	ILMN_189545	ILMN_247039	RELL1	NM_145923.4	NM_145923.4		100532	142348252	NM_145923.4	Rell1	NP_666035.2	ILMN_2656645	004560278	S	2284	TGTGGTAGATGCAGTTTGATGTGAACCCACACTGGCAGCTAGTGACTTGG	5	-	64301043-64301092	5qC3.1	Mus musculus RELT-like 1 (Rell1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA536743	AA536743
Mus musculus	RefSeq	ILMN_201484	ILMN_201484	LOC385242	XM_358142.1	XM_358142.1			38094146	XM_358142.1	LOC385242		ILMN_1224048	001660441	S	404	TCGCCTCAGGGTTAATTACAGACCTATCAAATTACCTGAAAGGGAACTGG										
Mus musculus	RefSeq	ILMN_214554	ILMN_214554	ZCCHC18	NM_025893.2	NM_025893.2		66995	78482622	NM_025893.2	Zcchc18	NP_080169.2	ILMN_2649172	003890750	S	2041	CCCCTTGGTGAATGTCCTGCGTATTTCCCTGTACCTGTGTGCCTCGGTAT	X	+	133530699-133530748	XqF1	Mus musculus zinc finger, CCHC domain containing 18 (Zcchc18), transcript variant 3, mRNA.				1500031H04Rik; Sizn2	1500031H04Rik; Sizn2
Mus musculus	RefSeq	ILMN_219112	ILMN_219112	DOC2G	NM_021791.3	NM_021791.3		60425	139949244	NM_021791.3	Doc2g	NP_068563.2	ILMN_2704429	006580064	S	647	ACGAGTGCCCCTGAGGAAGCTGGTGCCAAACCGAGCCAGGAGCTTTGACA	19	+	4004576-4004625	19qA	Mus musculus double C2, gamma (Doc2g), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	D830013O18Rik	D830013O18Rik
Mus musculus	RefSeq	ILMN_213532	ILMN_213532	OLFR482	NM_146733.1	NM_146733.1		258728	22129374	NM_146733.1	Olfr482	NP_666944.1	ILMN_1223283	003800292	S	611	GTTCTGCTGGCTTAATTACTATGATTACAGTGTTTGTCATAGCCGTCTCC	7	-	115238422-115238471	7qE3	Mus musculus olfactory receptor 482 (Olfr482), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-14	MOR204-14
Mus musculus	RefSeq	ILMN_217469	ILMN_217469	ARPP21	NM_033264.1	NM_033264.1		74100	15149483	NM_033264.1	Arpp21	NP_150289.1	ILMN_1241866	002630370	S	2755	TAGCTGGTTAATGGTGCATAATTCCGTCATGTCTGCTAGGTATGCCTTTC	9	-	111968060-111968109	9qF3	Mus musculus cyclic AMP-regulated phosphoprotein, 21 (Arpp21), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ARPP-21; 0710001E13Rik; AI853636; D9Bwg1012e; Tarpp	ARPP-21; 0710001E13Rik; AI853636; D9Bwg1012e; Tarpp
Mus musculus	RefSeq	ILMN_217469	ILMN_217469	ARPP21	NM_033264.1	NM_033264.1		74100	15149483	NM_033264.1	Arpp21	NP_150289.1	ILMN_2685183	001690630	S	3004	AATGGAAGGAATAATTTATATACACTATAGAGTTTTCTTTTTTAAATGGA	9	-	111967811-111967860	9qF3	Mus musculus cyclic AMP-regulated phosphoprotein, 21 (Arpp21), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ARPP-21; 0710001E13Rik; AI853636; D9Bwg1012e; Tarpp	ARPP-21; 0710001E13Rik; AI853636; D9Bwg1012e; Tarpp
Mus musculus	RefSeq	ILMN_208910	ILMN_208910	FAM122B	NM_030167.2	NM_030167.2		78755	142348852	NM_030167.2	Fam122b	NP_084443.1	ILMN_1246764	002000433	S	3062	GTCCCAACCATCAGTCACCACTTCTTCTTACAGATTCCCTTATCACATTC	X	-	50597040-50597089	XqA5	Mus musculus family with sequence similarity 122, member B (Fam122b), mRNA.				AI256344	AI256344
Mus musculus	RefSeq	ILMN_186442	ILMN_186442	ZBTB37	NM_173424.3	NM_173424.3		240869	146198631	NM_173424.3	Zbtb37	NP_775600.1	ILMN_2435592	007150682	S	3814	ACTGATCAGGCAGGTAGCTGACACGTACAGAAGAGACTGCTTCAGATGGA				1qH2.1	Mus musculus zinc finger and BTB domain containing 37 (Zbtb37), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	D430004I08Rik	D430004I08Rik
Mus musculus	Riken	ILMN_202980	ILMN_202980	4932412G04RIK	ri|5830435C06|PX00039K20|AK030866|2730					AK030866	4932412G04Rik		ILMN_2553797	000630593	S	2528	GCCTAGAGCTTGTGAAAGGGCGAAGCCATATGAATGAAAGAGGTAGGGGC										
Mus musculus	RefSeq	ILMN_214815	ILMN_214815	SLMO1	NM_144867.2	NM_144867.2		225655	87196348	NM_144867.2	Slmo1	NP_659116.1	ILMN_2652270	001430709	S	561	GGATAATTGAACATTCCGAGAGCGCCATAAGCTAACAGGTCTGCCACCCA	18	+	67637623-67637657:67637658-67637672	18qE1	Mus musculus slowmo homolog 1 (Drosophila) (Slmo1), mRNA.				A230074A19Rik; MGC28728; BC019561	A230074A19Rik; MGC28728; BC019561
Mus musculus	MEEBO	ILMN_185079	ILMN_185079	KATNB1	scl33465.19_457				51764282	XM_134311	Katnb1		ILMN_2423984	001690730	S	7	CGGGCTCCTTTGGGATGGGCAATGCCACCCTATGTGCTTTACCTGGATAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A complex possessing an activity that couples ATP hydrolysis to the severing of microtubules; usually a heterodimer comprising a catalytic subunit (often 60kDa) and a regulatory subunit (often 80 kDa) [goid 8352] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with dynein, the multisubunit protein complex that is associated with microtubules [goid 45502] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_186317	ILMN_186317	TRPC4AP	NM_019828.1	NM_019828.1		56407	9790044	NM_019828.1	Trpc4ap	NP_062802.1	ILMN_1225522	001450246	S	1877	CATGCTGGTGCGCTGTGTCACTCTGTCACTGGACCGATTTGAAAACCAGG	2	-	155463405-155463454	2qH1	Mus musculus transient receptor potential cation channel, subfamily C, member 4 associated protein (Trpc4ap), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	truss; Trrp4ap; D2Ertd113e; 4833429F06Rik; mFLJ00177; FLJ00177	truss; Trrp4ap; D2Ertd113e; 4833429F06Rik; mFLJ00177; FLJ00177
Mus musculus	RefSeq	ILMN_186317	ILMN_186317	TRPC4AP	NM_019828.1	NM_019828.1		56407	9790044	NM_019828.1	Trpc4ap	NP_062802.1	ILMN_2940595	006900538	S	2623	TAAGGACAATGGCACCATGCCCACCTTTCCCTCGCAATCCTGGAGCCCTG	2	-	155460462-155460511	2qH1	Mus musculus transient receptor potential cation channel, subfamily C, member 4 associated protein (Trpc4ap), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	truss; Trrp4ap; D2Ertd113e; 4833429F06Rik; mFLJ00177; FLJ00177	truss; Trrp4ap; D2Ertd113e; 4833429F06Rik; mFLJ00177; FLJ00177
Mus musculus	RefSeq	ILMN_186317	ILMN_186317	TRPC4AP	NM_019828.1	NM_019828.1		56407	9790044	NM_019828.1	Trpc4ap	NP_062802.1	ILMN_2434503	003890202	S	2906	TGCTCATTGGCCACTGTGTTCATCCAGGAGGCTCCCTAGAAGTGGGGGGA	2	-	155460179-155460228	2qH1	Mus musculus transient receptor potential cation channel, subfamily C, member 4 associated protein (Trpc4ap), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	truss; Trrp4ap; D2Ertd113e; 4833429F06Rik; mFLJ00177; FLJ00177	truss; Trrp4ap; D2Ertd113e; 4833429F06Rik; mFLJ00177; FLJ00177
Mus musculus	MEEBO	ILMN_219818	ILMN_219818	SIAT9	scl29888.9.1_8	NM_011375.1			6755517	NM_011375.1	Siat9		ILMN_1232514	004040646	S	1366	GCAGCCTCCACAGGGACTTCACCCTGCAGCTGCTTCGATGTGCAGCTAGT										
Mus musculus	RefSeq	ILMN_194438	ILMN_194438	ZNRF4	NM_011483.2	NM_011483.2		20834	113205050	NM_011483.2	Znrf4	NP_035613.2	ILMN_1225919	000730296	S	1138	AGAAGCGACTTCCGAGCTCTCCTGACCCCAACTGACGCGGGAAGGGCGGA	17	-	56650719-56650744:56650745-56650768	17qD	Mus musculus zinc and ring finger 4 (Znrf4), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Ssrzf1; 1700094M01Rik; spzn	Ssrzf1; 1700094M01Rik; spzn
Mus musculus	RefSeq	ILMN_205395	ILMN_259551	D14ABB1E	XM_978140.1	XM_978140.1		218850	94397888	XM_978140.1	D14Abb1e	XP_983234.1	ILMN_2572227	002750452	S	5287	TTTCTCCTTGAACACATCCTTAACTTAATGGAGATTTCTCTGTACCCGAG					PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 4 (D14Abb1e), mRNA.					
Mus musculus	RefSeq	ILMN_221239	ILMN_221239	HSPA5	NM_022310.2	NM_022310.2		14828	31981721	NM_022310.2	Hspa5	NP_071705.2	ILMN_1255561	000150678	S	2232	CTGGACTCAGGAACTTTCGTTGGGAGAAAATTGAGAGAACTTAAGTCTCG	2	+	34631670-34631719	2qB	Mus musculus heat shock protein 5 (Hspa5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any part of a ribosome [goid 43022] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	78kDa; Bip; AL022860; D2Wsu17e; AU019543; Hsce70; D2Wsu141e; Grp78; Sez7; SEZ-7; mBiP	78kDa; Bip; AL022860; D2Wsu17e; AU019543; Hsce70; D2Wsu141e; Grp78; Sez7; SEZ-7; mBiP
Mus musculus	MEEBO	ILMN_186717	ILMN_186717	PARG	scl46480.20_587				6754985	NM_011960	Parg		ILMN_2437900	006660400	S	14	ACCTATAATCGATGTCTGTGAGGCTAATCTGGAAACCAAAGCCAGTCTTA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IMP]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of poly(ADP-ribose) at glycosidic (1''-2') linkage of ribose-ribose bond to produce free ADP-ribose [goid 4649] [evidence IMP]		
Mus musculus	RefSeq	ILMN_215204	ILMN_215204	RBP7	NM_022020.2	NM_022020.2		63954	142379956	NM_022020.2	Rbp7	NP_071303.1	ILMN_1218914	003130154	S	220	GGAGAAGAGTTTGAGGAGGATAACAAAGGCCTGGATAACAGAAAATGCAC	4	-	148827465-148827514	4qE2	Mus musculus retinol binding protein 7, cellular (Rbp7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 5501] [evidence IDA]	CRBP-III; 1110002J23Rik	CRBP-III; 1110002J23Rik
Mus musculus	RefSeq	ILMN_215204	ILMN_215204	RBP7	NM_022020.2	NM_022020.2		63954	142379956	NM_022020.2	Rbp7	NP_071303.1	ILMN_2733708	007400537	S	443	CCCGCTTGAGGCAACTACTCAATGCCAAGTTATCTCGTAGAAGGAACGGG	4	-	148824003-148824032:148824533-148824552	4qE2	Mus musculus retinol binding protein 7, cellular (Rbp7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 5501] [evidence IDA]	CRBP-III; 1110002J23Rik	CRBP-III; 1110002J23Rik
Mus musculus	MEEBO	ILMN_188120	ILMN_188120	LRRTM2	scl51533.2_300				29725616	NM_178005	Lrrtm2		ILMN_1216323	002750477	S	1	CCTAATACAGCAATCCAGTAACAGCACTATCTCAAGTATGTTTTGGACAT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_209228	ILMN_209228	ARMC8	NM_028768.1	NM_028768.1		74125	27229174	NM_028768.1	Armc8	NP_083044.1	ILMN_2908981	002470259	S	2653	TGCACATGCACAGGAGTCAGGATGAATGACCGTGTGGGTGAGGGATACCT	9	-	99289668-99289717	9qE3.3	Mus musculus armadillo repeat containing 8 (Armc8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	HSPC056; 1200015K23Rik	HSPC056; 1200015K23Rik
Mus musculus	RefSeq	ILMN_220867	ILMN_220867	KLHL8	NM_178741.3	NM_178741.3		246293	142366889	NM_178741.3	Klhl8	NP_848856.1	ILMN_1244349	000110431	S	2363	GCTCTGAGAGATGTTTGATGTAGTGCCAAACCTTAAAATAGCTCTTTATT	5	-	104291819-104291868	5qE5	Mus musculus kelch-like 8 (Drosophila) (Klhl8), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D5Ertd431e; 2310001P09Rik; MGC102224	D5Ertd431e; 2310001P09Rik; MGC102224
Mus musculus	MEEBO	ILMN_190589	ILMN_190589	4930442E04RIK	scl53069.1.3_290						4930442E04Rik		ILMN_2471491	004880273	S	6	CAGAGCTGCATTTTGGAAGTACGAGAAAGACACTGTTGCCAGATGCCCAT										
Mus musculus	MEEBO	ILMN_212329	ILMN_212329	E030037J05RIK	scl00320477.2_10	NM_177169.2			31342971	NM_177169.2	E030037J05Rik		ILMN_2625204	004010435	S	2522	TCACTTCCTGTACACCGAGAGTTTCTGCCCACTCCCCATGCCAGCACCCT										
Mus musculus	RefSeq	ILMN_212144	ILMN_212144	PGRMC1	NM_016783.3	NM_016783.3		53328	118131178	NM_016783.3	Pgrmc1	NP_058063.2	ILMN_2623216	002680408	S	1468	CTGACATCTCTGAAGAATGAGAAAACACTACATGGCACTAGCTGGGTGAG	X	+	34145704-34145753	XqA3.3	Mus musculus progesterone receptor membrane component 1 (Pgrmc1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	HPR6.6; PPMR; AA415812; Vema	HPR6.6; PPMR; AA415812; Vema
Mus musculus	RefSeq	ILMN_185399	ILMN_237105	ZFP106	NM_011743.2	NM_011743.2		20402	109948268	NM_011743.2	Zfp106	NP_035873.2	ILMN_2482427	000580142	S	2446	CCAAAACAGGAACACATCTCCCAGAGCCAAACCTCAATAGCGCTCGACGA	2	-	120359410-120359459	2qE5	Mus musculus zinc finger protein 106 (Zfp106), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect [goid 1515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]	H3a; Cd-1; Sh3bp3; D2Dcr28; sirm	H3a; Cd-1; Sh3bp3; D2Dcr28; sirm
Mus musculus	RefSeq	ILMN_196514	ILMN_320325	A230106M20RIK	XM_001474467.1	XM_001474467.1		210094	149257121	XM_001474467.1	A230106M20Rik	XP_001474517.1	ILMN_2598962	004250551	S	2105	AGCTCCTGGCTTCACCTGCCCCAGAGTCTGTAACTAGCAGCAGTTTCCCC				7qB4	PREDICTED: Mus musculus RIKEN cDNA A230106M20 gene (A230106M20Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	MEEBO	ILMN_190276	ILMN_190276	ZFP82	scl00330502.1_77	NM_177889.2			31342742	NM_177889.2	Zfp82		ILMN_2468715	002510095	S	16	GAACAGAGGAGTAATAAAGAGAGCCATTCCTCCGGGCTGCACTGTGACGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214387	ILMN_214387	LRRC40	NM_024194.4	NM_024194.4		67144	146134918	NM_024194.4	Lrrc40	NP_077156.2	ILMN_2647476	003170259	S	3850	CCAGATCCCATCAGAGAGTATGGTCAAGAGACCCAAAGCTGCGTCACCAC				3qH4	Mus musculus leucine rich repeat containing 40 (Lrrc40), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI837674; 2610040E16Rik	AI837674; 2610040E16Rik
Mus musculus	RefSeq	ILMN_184289	ILMN_214387	LRRC40	NM_024194.4	NM_024194.4		67144	146134918	NM_024194.4	Lrrc40	NP_077156.2	ILMN_2417413	000580349	S	3013	CTCTCCAGCTGTGTCTTACGTTCTGACACTATGGGTTAGGGGTAGGGTGT				3qH4	Mus musculus leucine rich repeat containing 40 (Lrrc40), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI837674; 2610040E16Rik	AI837674; 2610040E16Rik
Mus musculus	MEEBO	ILMN_194433	ILMN_194433	4933412E12RIK	scl38407.8_227						4933412E12Rik		ILMN_2506388	001660400	S	6	CCTGCTGAAACCGGCCAGCACAGCTACGCATCCCATCACTTCATTGTTTC										
Mus musculus	RefSeq	ILMN_197209	ILMN_197209	LOC241289	XM_140856.3	XM_140856.3			38074593	XM_140856.3	LOC241289		ILMN_2527301	004210523	S	3498	TGCTAATGAAAGACAGTGGGAACTGGCCAAGCCGGAAGGCTCAGGGGACC										
Mus musculus	RefSeq	ILMN_214007	ILMN_214007	IQCD	NM_029408.2	NM_029408.2		75732	133893038	NM_029408.2	Iqcd	NP_083684.1	ILMN_1254417	002070386	S	1299	AGAGCGAGATCAATTCCAAGAAGCGGGTGGAGGCAGAGCGCGAGATGGTG	5	+	121056753-121056802	5qF	Mus musculus IQ motif containing D (Iqcd), mRNA.				AI662646; 4933433C09Rik	AI662646; 4933433C09Rik
Mus musculus	RefSeq	ILMN_197090	ILMN_310160	LOC667395	XR_030733.1	XR_030733.1		667395	149263451	XR_030733.1	LOC667395		ILMN_1236359	002510445	S	785	CAGATGAAGCAAGAAATCTGAAGGCCTATGGAGAACTTCCAGAACATGCA	12	-	89377898-89377947	12qD3	PREDICTED: Mus musculus hypothetical LOC667395 (LOC667395), misc RNA.					
Mus musculus	RefSeq	ILMN_212491	ILMN_212491	CX3CL1	NM_009142.3	NM_009142.3		20312	114431260	NM_009142.3	Cx3cl1	NP_033168.2	ILMN_2627041	007650746	S	2945	CGGTGGGGAACCTTTAAGGGTTGGGACACCCGTCATCGGACTTTGTTGGT	8	+	97306128-97306177	8qC5	Mus musculus chemokine (C-X3-C motif) ligand 1 (Cx3cl1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	CX3C; AI848747; AB030188; Cxc3; D8Bwg0439e; ABCD-3; Scyd1	CX3C; AI848747; AB030188; Cxc3; D8Bwg0439e; ABCD-3; Scyd1
Mus musculus	RefSeq	ILMN_222914	ILMN_222914	NAIP5	NM_010870.2	NM_010870.2		17951	124107601	NM_010870.2	Naip5	NP_035000.2	ILMN_3136894	001780097	A	274	CCCGAGCTCTCTGCTCTTCTCGGGGTGGATGCATTTCAGGTGGCAAAGAG	13	-	101017134-101017155:101017156-101017183	13qD1	Mus musculus NLR family, apoptosis inhibitory protein 5 (Naip5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Birc1e; Naip-rs3; Naip5	Birc1e; Naip-rs3; Naip5
Mus musculus	RefSeq	ILMN_222914	ILMN_222914	NAIP5	NM_010870.2	NM_010870.2		17951	124107601	NM_010870.2	Naip5	NP_035000.2	ILMN_3059557	002060674	I	4910	GCTGACTCTCTCTCCAGGAGATGCTCTTTAGTCTTTGCAGCACTTTTGCG	13	-	100993422-100993471	13qD1	Mus musculus NLR family, apoptosis inhibitory protein 5 (Naip5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Birc1e; Naip-rs3; Naip5	Birc1e; Naip-rs3; Naip5
Mus musculus	MEEBO	ILMN_184628	ILMN_184628	6430511F03	scl54729.1.1_292						6430511F03		ILMN_2420209	005130427	S	14	AACCCAGATCCAGTTGTCTCCGTACCTTGTCACTCTGAGCAGATCTACCC										
Mus musculus	RefSeq	ILMN_200766	ILMN_231368	LOC673607	XM_001005962.1	XM_001005962.1		673607	94420392	XM_001005962.1	LOC673607	XP_001005962.1	ILMN_2539925	003870524	S	58	GTTCCACCCTCTTCCATAGCCCAGAGTCAGATTTGCTCTAAAACTCCATG					PREDICTED: Mus musculus similar to Nucleolar GTP-binding protein 1 (Chronic renal failure gene protein) (GTP-binding protein NGB) (LOC673607), mRNA.					
Mus musculus	RefSeq	ILMN_188009	ILMN_226277	GLRX5	NM_028419.2	NM_028419.2		73046	142365117	NM_028419.2	Glrx5	NP_082695.1	ILMN_1217767	002370427	S	674	GTATTGCTATAACCGTGATCTGTTCTTACGTTGTCTTTATTCTCTGCCGG	12	+	106278864-106278913	12qE	Mus musculus glutaredoxin 5 homolog (S. cerevisiae) (Glrx5), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	2310004O13Rik; AU020725; 2900070E19Rik	2310004O13Rik; AU020725; 2900070E19Rik
Mus musculus	RefSeq	ILMN_223502	ILMN_223502	OMA1	NM_025909.3	NM_025909.3		67013	146149170	NM_025909.3	Oma1	NP_080185.1	ILMN_2764865	001570273	S	1600	CTAGAGAAGAGAACTGCAGGCTGAACGGAAGTGGGTGAATCGTGGGCTCC				4qC6	Mus musculus OMA1 homolog, zinc metallopeptidase (S. cerevisiae) (Oma1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	ZMPOMA1; 2010001O09Rik; MPRP-1	ZMPOMA1; 2010001O09Rik; MPRP-1
Mus musculus	RefSeq	ILMN_200018	ILMN_325142	EG622509	XM_001474664.1	XM_001474664.1		622509	149267751	XM_001474664.1	EG622509	XP_001474714.1	ILMN_2537305	004060445	S	241	TCGCTGCACCAGGTCATTGAAACCGAGCAGAATGTCTTTCTGATACTGGA				16qA1	PREDICTED: Mus musculus predicted gene, EG622509 (EG622509), mRNA.					
Mus musculus	RefSeq	ILMN_213060	ILMN_215044	OLFR1084	NM_207135.2	NM_207135.2		258235	120953201	NM_207135.2	Olfr1084	NP_997018.2	ILMN_1222947	004640671	S	738	GTCCCACCTGACAGTGGTTACAATATTCTATGGGACACTGATATTTATGT	2	-	86479088-86479137	2qD	Mus musculus olfactory receptor 1084 (Olfr1084), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR192-3; MOR192-2	MOR192-3; MOR192-2
Mus musculus	RefSeq	ILMN_186920	ILMN_186920	YARS	NM_134151.3	NM_134151.3		107271	142351106	NM_134151.3	Yars	NP_598912.2	ILMN_2439632	006290301	S	2325	CAAATAAAGTGTCTGAAAAGGCTTTCTGCACGGAGTCTCGTGAGCTGCAT	4|NT_039289.1	+	138181-138230	4qD2.2	Mus musculus tyrosyl-tRNA synthetase (Yars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling tyrosine to tyrosyl-tRNA, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6437] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + L-tyrosyl-tRNA(Tyr) [goid 4831] [evidence IEA]	AU018965; AL024047	AU018965; AL024047
Mus musculus	Riken	ILMN_202801	ILMN_202801	AGPT	ri|5330427O09|PX00054M03|AK030531|1531					AK030531	Agpt		ILMN_1230114	004590717	S	1022	GGAACTTATGAGTCTTGTCATTCAGGTAACTCTCACACAAGGGCCCAGAG										
Mus musculus	RefSeq	ILMN_216321	ILMN_216321	OTOA	NM_139310.1	NM_139310.1		246190	21314861	NM_139310.1	Otoa	NP_647471.1	ILMN_2735754	006370523	S	3468	CTGCTTCTGACGGCCAAGTCCTGATGCCGAGTGGCCTGTTGAGTGTTGCA	7	+	128306422-128306445:128306446-128306471	7qF2	Mus musculus otoancorin (Otoa), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_216321	ILMN_216321	OTOA	NM_139310.1	NM_139310.1		246190	21314861	NM_139310.1	Otoa	NP_647471.1	ILMN_2669750	006400142	S	991	CCCAGGCATTTCTGGAGAGGATCCGCTGTTCCAGCTTTGACGTGAGGAAC	7	+	128258057-128258106	7qF2	Mus musculus otoancorin (Otoa), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_210411	ILMN_210411	CLEC1B	NM_019985.2	NM_019985.2		56760	50355991	NM_019985.2	Clec1b	NP_064369.1	ILMN_2749280	002710008	S	423	TCTGCTGATCTCATCCATGGGGCTGGTTGTTGGACTCGTGGCTCTGGGGA	6	+	129350118-129350167	6qF3	Mus musculus C-type lectin domain family 1, member b (Clec1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISA]	Clec2; Clec-2; 1810061I13Rik; AI465458; mCLEC-2	Clec2; Clec-2; 1810061I13Rik; AI465458; mCLEC-2
Mus musculus	RefSeq	ILMN_210411	ILMN_210411	CLEC1B	NM_019985.2	NM_019985.2		56760	50355991	NM_019985.2	Clec1b	NP_064369.1	ILMN_2605372	000020338	S	930	TCCAGCTTCCTGTAAAGAGAGACATTACTTAATATGTGAGAGAAATGCTG	6	+	129355191-129355240	6qF3	Mus musculus C-type lectin domain family 1, member b (Clec1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISA]	Clec2; Clec-2; 1810061I13Rik; AI465458; mCLEC-2	Clec2; Clec-2; 1810061I13Rik; AI465458; mCLEC-2
Mus musculus	RefSeq	ILMN_238870	ILMN_238870	SERPINB3A	NM_009126.2	NM_009126.2		20248	51092273	NM_009126.2	Serpinb3a	NP_033152.2	ILMN_2837969	006180470	S	1301	CCAAGTCCCTGCTAAGAATGCACTACTTGGGCCAGGATAGCTCTATTATC	1	-	108942442-108942491	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3A (Serpinb3a), mRNA.				Sqn5; Serpinb4; 1110001H02Rik; Scca2; 1110013A16Rik	Sqn5; Serpinb4; 1110001H02Rik; Scca2; 1110013A16Rik
Mus musculus	RefSeq	ILMN_217773	ILMN_238870	SERPINB3A	NM_009126.2	NM_009126.2		20248	51092273	NM_009126.2	Serpinb3a	NP_033152.2	ILMN_2687408	003180278	S	1063	GCTGCAACAGGTGTGGAAGTCAGTTTAACATCAGCACAGATAGCAGAAGA	1	-	108942680-108942729	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3A (Serpinb3a), mRNA.				Sqn5; Serpinb4; 1110001H02Rik; Scca2; 1110013A16Rik	Sqn5; Serpinb4; 1110001H02Rik; Scca2; 1110013A16Rik
Mus musculus	RefSeq	ILMN_217773	ILMN_238870	SERPINB3A	NM_009126.2	NM_009126.2		20248	51092273	NM_009126.2	Serpinb3a	NP_033152.2	ILMN_2755702	007560364	S	1539	TTGCTTTACAAGATATCTAGATACTTCATAAGTTATAAATGTTGTGAATT	1	-	108942204-108942253	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3A (Serpinb3a), mRNA.				Sqn5; Serpinb4; 1110001H02Rik; Scca2; 1110013A16Rik	Sqn5; Serpinb4; 1110001H02Rik; Scca2; 1110013A16Rik
Mus musculus	MEEBO	ILMN_216945	ILMN_216945	9330154K18RIK	scl47182.6.1_188	NM_177011.2			31342585	NM_177011.2	9330154K18Rik		ILMN_1242211	002060427	S	3536	GAAGTTTCACTTGGGGTTAAGATAGGATTCCCTACAGCTTCTGAAATGGC										
Mus musculus	RefSeq	ILMN_219616	ILMN_219616	ATP7A	NM_009726.3	NM_009726.3		11977	142352884	NM_009726.3	Atp7a	NP_033856.2	ILMN_2747430	004010048	S	4546	CCACACTGTAAAAAGCCTTGGGGGATGCTGCTAGTTAAAGTTCACGTGCA	X	+	103319943-103319954:103319955-103319992	XqD	Mus musculus ATPase, Cu++ transporting, alpha polypeptide (Atp7a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISO]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The directed movement of copper ions out of a cell or organelle [goid 60003] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 2082] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The progression of a pyramidal neuron from its initial formation to its mature state [goid 21860] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; Any process that activates, maintains or increases the rate activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48554] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The chemical reactions and pathways involving epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine [goid 42414] [evidence IMP]; Any process that activates, maintains or increases the rate activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48554] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42421] [evidence IMP]; The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42415] [evidence IMP]; The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid [goid 6568] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48553] [evidence IMP]; The modification of peptidyl-lysine [goid 18205] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The directed movement of copper ions into a cell or organelle [goid 15677] [evidence IMP]; Any process that activates, maintains or increases the rate activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48554] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; Any process that activates, maintains or increases the rate activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48554] [evidence IMP]; The chemical reactions and pathways resulting in the formation of elastin, a fibrous glycoprotein found in elastic tissues such as the walls of arteries [goid 51542] [evidence IMP]; Any process that activates, maintains or increases the rate activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48554] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process that reduce or remove the toxicity of copper ion. These include transport of copper away from sensitive areas and to compartments or complexes whose purpose is sequestration of copper ion [goid 10273] [evidence IMP]; The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites [goid 48812] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42428] [evidence IMP]; The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42421] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence IMP]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The directed movement of copper ions into a cell or organelle [goid 15677] [evidence IMP]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IMP]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IMP]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IDA]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways involving tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6570] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The process whereby a relatively unspecialized thymocyte acquires specialized features of a T-helper cell [goid 42093] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IGI]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A copper chaperone activity that specifically delivers copper to the Cu-Zn superoxide dismutase [goid 16532] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IMP]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [evidence IDA]	brindled; br; I14; Blo; Mo; DXHXS1608e; MNK; blotchy; mottled	brindled; br; I14; Blo; Mo; DXHXS1608e; MNK; blotchy; mottled
Mus musculus	Riken	ILMN_202598	ILMN_202598	E430007C11RIK	ri|E430007C11|PX00097J04|AK088198|1371					AK088198	E430007C11Rik		ILMN_1221994	001400156	S	462	TTGGTACGCTTCAGCCCTGACTGCAGGGAAGTTCATCATGACGGCCTCCA										
Mus musculus	RefSeq	ILMN_215731	ILMN_215731	DBNDD2	NM_026797.2	NM_026797.2		52840	115299765	NM_026797.2	Dbndd2	NP_081073.1	ILMN_3026137	002370474	I	119	TCCCCAGGGAACCCCGCAGGCTTAGCCCCACCCGGCCGGCGCTGCTCGCT	2	+	164312073-164312122	2qH3	Mus musculus dysbindin (dystrobrevin binding protein 1) domain containing 2 (Dbndd2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2900022J10Rik; D2Bwg0891e; R74724; RP23-140D14.3; AU041050; AW048677; 1110017A21Rik	2900022J10Rik; D2Bwg0891e; R74724; RP23-140D14.3; AU041050; AW048677; 1110017A21Rik
Mus musculus	Riken	ILMN_202250	ILMN_202250	PPP3CC	ri|4921535M01|PX00015K09|AK015002|2494					AK015002	Ppp3cc		ILMN_1233999	004570154	S	1988	CCCATTGGACCTGTTGCATTGAGGTCAAAGCACAAGCTTAGCTCCTGTCC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184264	ILMN_230191	RAPGEF1	NM_001039087.1	NM_001039087.1		107746	84875505	NM_001039087.1	Rapgef1	NP_001034176.1	ILMN_2417221	000870546	S	2252	GCCGCTCAGGGCCTCAGTGTATCCGTGTCTAACTCCTTTCTCAACCGGCA	2	+	29565757-29565806	2qB	Mus musculus Rap guanine nucleotide exchange factor (GEF) 1 (Rapgef1), transcript variant 1, mRNA.		The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence TAS]	C3G; 4932418O06Rik; Grf2	C3G; 4932418O06Rik; Grf2
Mus musculus	RefSeq	ILMN_218790	ILMN_218790	LOR	NM_008508.2	NM_008508.2		16939	112293270	NM_008508.2	Lor	NP_032534.2	ILMN_1241825	005360228	S	1686	GTATCCTGTTCTGCAGATTTTTCATCTTGGTTTCTGAATGACTACCTCCC	3	-	91884236-91884285	3qF1	Mus musculus loricrin (Lor), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IDA]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [evidence IDA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IDA]; The action of a molecule that contributes to the structural integrity of an epidermal cutaneous structure [goid 30280] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	S77319; AI036317	S77319; AI036317
Mus musculus	Riken	ILMN_203942	ILMN_203942	1200016L19RIK	ri|A430075D10|PX00138A16|AK040183|1645					AK040183	1200016L19Rik		ILMN_1230285	004830224	S	1480	TGTTGGCCTTGCAGAGAACTTGGTTCAGTTCCCATCACCCACATGGTGGC										
Mus musculus	RefSeq	ILMN_201495	ILMN_201495	LOC385258	XM_358154.1	XM_358154.1			38094705	XM_358154.1	LOC385258		ILMN_1233908	004280082	S	2	TGGGACAAGCTGGCAAGCAGGAGAACCTTAGAATGTTCAGTGATGTCACC										
Mus musculus	MEEBO	ILMN_214246	ILMN_214246	MTAP2	scl000811.1_114	NM_008632.1			6678943	NM_008632.1	Mtap2		ILMN_2645890	007550201	S	4541	TTCCACTCCTGAAAGAAAAGTAGCTAAAAAGGAACCTAGCACGGTCTCCA						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_214246	ILMN_214246	MTAP2	scl000811.1_114	NM_008632.1			6678943	NM_008632.1	Mtap2		ILMN_1240335	001050605	S	4660	CCCACTCTCCTTCCAGGAAACTCATTTTAAAACCTGCTATCAAATACACT						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_214246	ILMN_214246	MTAP2	scl000811.1_114	NM_008632.1			6678943	NM_008632.1	Mtap2		ILMN_1226553	001580500	S	5715	CACTGGAGTAACATTTAGGCATGAGCTCTTGGCAGGAGTGGGCTCTGAGC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_214246	ILMN_214246	MTAP2	scl000811.1_114	NM_008632.1			6678943	NM_008632.1	Mtap2		ILMN_2709782	002470468	S	5722	GTAACATTTAGGCATGAGCTCTTGGCAGGAGTGGGCTCTGAGCAGGTGTC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_214246	ILMN_214246	MTAP2	scl000811.1_114	NM_008632.1			6678943	NM_008632.1	Mtap2		ILMN_1224188	005890181	S	4680	CTCATTTTAAAACCTGCTATCAAATACACTAGACCAACTCATCTCTCCTG						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205493	ILMN_205493	ATIC	ri|D030055I22|PX00181K01|AK051020|2693					AK051020	Atic		ILMN_2572977	003610292	S	2353	AGTTCTGCATCCCCATATTACCAGTGCAGAGGTAGGGGACTCAATGCCAC							The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate [goid 6188] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide [goid 3937] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide = tetrahydrofolate + 5'-phosphoribosyl-5-formamido-4-imidazolecarboxamide [goid 4643] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195803	ILMN_195803	SCL0001534.1_16	scl0001534.1_16	AK041119.1			26334220	AK041119.1	scl0001534.1_16		ILMN_1220049	000990373	S	1	GGCAGCCTCTCCCGAGACATGGGCAGCACTGATAGAATAGAGAATTTGAG										
Mus musculus	Riken	ILMN_201670	ILMN_201670	1810007A24RIK	ri|1810007A24|R000022E15|AK007357|689					AK007357	1810007A24Rik		ILMN_1231213	003610685	S	606	CCCCTTTTGCTTAAAGATGAATCCCACCCCAATCTTGATTCAGCTTCACC										
Mus musculus	Riken	ILMN_205459	ILMN_205459	TRIP	ri|A430041M04|PX00135B23|AK040001|1949					AK040001	Trip		ILMN_2572715	003400280	S	1884	TTGGGACCTCTGGAAAAGCAGCTCATAATTGCTGAGCCATCTCTTCTGCC										
Mus musculus	RefSeq	ILMN_187052	ILMN_187052	MLXIPL	NM_021455.3	NM_021455.3		58805	103472008	NM_021455.3	Mlxipl	NP_067430.2	ILMN_2992232	005090343	S	3043	AGAAGAGATCAGGGCAAGGGCTAGCCAGAGCATGGCAGGCATCTTGCATG	5	+	135613668-135613717	5qG2	Mus musculus MLX interacting protein-like (Mlxipl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10552] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of glycolysis [goid 45821] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids [goid 45723] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Wbscr14; WS-bHLH; ChREBP	Wbscr14; WS-bHLH; ChREBP
Mus musculus	RefSeq	ILMN_201330	ILMN_201330	LOC382461	XM_356518.1	XM_356518.1			38090978	XM_356518.1	LOC382461		ILMN_1234231	001940475	S	609	CACTCGAAAAAGGAAAAGAAGTGACTGGCTGTACTGGCCCTGGTGTCTTC										
Mus musculus	RefSeq	ILMN_191262	ILMN_231748	4930421P05RIK	XM_988700.1	XM_988700.1		73771	94369102	XM_988700.1	4930421P05Rik	XP_993794.1	ILMN_1230216	006020709	S	1858	CCTGAACAGTTGACAGGCTTTTAGAGGGTGTTTCAGATAATTAGTTTTCA					PREDICTED: Mus musculus RIKEN cDNA 4930421P05 gene (4930421P05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220143	ILMN_220143	IMPA1	NM_018864.4	NM_018864.4		55980	142371023	NM_018864.4	Impa1	NP_061352.2	ILMN_2718157	000060138	S	1997	ACTCAGATTTGGGCACTGTAATGACTATATCTGTGCTGTTAATTACATGT	3	-	10314027-10314076	3qA1	Mus musculus inositol (myo)-1(or 4)-monophosphatase 1 (Impa1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3 [goid 42578] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: myo-inositol 1-phosphate + H2O = myo-inositol + phosphate [goid 8934] [evidence ISO]	2610002K09Rik; 2900059K10Rik; AI325909	2610002K09Rik; 2900059K10Rik; AI325909
Mus musculus	MEEBO	ILMN_209391	ILMN_209391	4930442G15RIK	scl36915.2.1_208				51764889	XM_489273	4930442G15Rik		ILMN_2595368	007400093	S	827	GCACAGACAATAAGATACCTGGATGGGATCCTGTTCTGAGATTCCCTTGT										
Mus musculus	RefSeq	ILMN_197713	ILMN_197713	LOC332100	XM_285129.2	XM_285129.2			38077544	XM_285129.2	LOC332100		ILMN_1213957	004280040	S	982	CGACCCACCAGTGAAAGCATCTGGCTTCACTGCTCAGAAAAGATCGATTA										
Mus musculus	RefSeq	ILMN_185859	ILMN_185859	TSPAN13	NM_025359.3	NM_025359.3		66109	118130350	NM_025359.3	Tspan13	NP_079635.1	ILMN_1231147	002070037	S	1435	GTGTAACATCTTCAGCTCTCAAAATGGGATGAATTTGAGGAAGATAGAGC	12	-	36741580-36741629	12qA3	Mus musculus tetraspanin 13 (Tspan13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Tm4sf13; 1100001I23Rik; NET-6	Tm4sf13; 1100001I23Rik; NET-6
Mus musculus	RefSeq	ILMN_192557	ILMN_192557	ZFP574	NM_175477.3	NM_175477.3		232976	142363109	NM_175477.3	Zfp574	NP_780686.1	ILMN_1216308	005360743	S	3075	AGGGCACTTCCCACTTTCCACCTGTTTGGTGGTCTCCAAATGAAGCAGTC	7	+	25867429-25867478	7qA3	Mus musculus zinc finger protein 574 (Zfp574), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	A630056B21Rik	A630056B21Rik
Mus musculus	RefSeq	ILMN_258759	ILMN_258759	LOC545952	NM_001024727.1	NM_001024727.1		545952	85701555	NM_001024727.1	LOC545952	NP_001019898.1	ILMN_2836721	006770224	S	400	AATGCTGAGTGACCAGAGCCAGGTCTCCAACTCCACACTCTCCTGTCCAG	7	-	39033339-39033341:39036293-39036339		Mus musculus similar to RIKEN cDNA 4930433I11 gene (LOC545952), mRNA.					
Mus musculus	Riken	ILMN_204988	ILMN_204988	4631409F12RIK	ri|4631409F12|PX00102C11|AK028452|3332					AK028452	4631409F12Rik		ILMN_1214127	004040563	S	3149	AGGTGGGGTGCTGGAGAGATGGCTTAGCAGTGTAAGAGCATTTGCTGCTC										
Mus musculus	RefSeq	ILMN_222275	ILMN_222275	RAF1	NM_029780.3	NM_029780.3		110157	142380030	NM_029780.3	Raf1	NP_084056.1	ILMN_2747229	000770327	S	2493	GACTACTCACAGGGCCTTAACTTCATATTGCCTTCTTTTCTACCCCTCCT	6	-	115569114-115569163	6qE3	Mus musculus v-raf-leukemia viral oncogene 1 (Raf1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5057] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Raf-1; MGC102375; c-Raf; BB129353; AA990557; D830050J10Rik; Craf1; v-Raf; 6430402F14Rik	Raf-1; MGC102375; c-Raf; BB129353; AA990557; D830050J10Rik; Craf1; v-Raf; 6430402F14Rik
Mus musculus	RefSeq	ILMN_209630	ILMN_209630	PCDH1	NM_029357.3	NM_029357.3		75599	118130604	NM_029357.3	Pcdh1	NP_083633.2	ILMN_1260020	001990279	S	3568	CAGGATGCTGAACTAGCTACTGGGTCTTTCAGGTGGAGCTAATGGACAGG	18	-	38356632-38356681	18qB3	Mus musculus protocadherin 1 (Pcdh1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI585920; 2010005A06Rik	AI585920; 2010005A06Rik
Mus musculus	RefSeq	ILMN_209630	ILMN_209630	PCDH1	NM_029357.3	NM_029357.3		75599	118130604	NM_029357.3	Pcdh1	NP_083633.2	ILMN_2597660	006330253	S	3611	GGACAGGTAAATAGGTTTGGAGACAGAAGGGCACAGGCGGATGTGGGAGA	18	-	38356589-38356638	18qB3	Mus musculus protocadherin 1 (Pcdh1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI585920; 2010005A06Rik	AI585920; 2010005A06Rik
Mus musculus	RefSeq	ILMN_198631	ILMN_198631	LOC269899	XM_196410.1	XM_196410.1			25050641	XM_196410.1	LOC269899		ILMN_1237970	005700243	S	501	GGCATACCTGCTGAGGGGTTCAGCTCTCCTGCCTTGAGCATAGAGACTCA										
Mus musculus	RefSeq	ILMN_204608	ILMN_255628	5330408N05RIK	XM_981967.1	XM_981967.1		320720	94366519	XM_981967.1	5330408N05Rik	XP_987061.1	ILMN_1243146	004890692	S	2219	GGGATGGTCGCTTAACGCTTTGCTGATGTTCCCGTTTGGGGTTTCAGAAC				2qC2	PREDICTED: Mus musculus RIKEN cDNA 5330408N05 gene, transcript variant 4 (5330408N05Rik), mRNA.					
Mus musculus	Riken	ILMN_202714	ILMN_202714	3000003G13RIK	ri|2010006A14|ZX00053F01|AK019042|422					AK019042	3000003G13Rik		ILMN_2551723	001240427	S	323	GGCTGCACGCAGACTCTCGTCCAAGTGTTTGCCCCAAGATGTCCAGATGA										
Mus musculus	RefSeq	ILMN_239994	ILMN_239994	GPR4	NM_175668.2	NM_175668.2		319197	31342294	NM_175668.2	Gpr4	NP_783599.1	ILMN_2878636	005690437	S	2705	CTGCCTGAAGGAATCGCTAAGCAGGGCTGGTTTAGAAAGGAGGCCCAGGA	7	+	18382519-18382568	7qA3	Mus musculus G protein-coupled receptor 4 (Gpr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220701	ILMN_220701	DDX52	NM_030096.1	NM_030096.1		78394	33859745	NM_030096.1	Ddx52	NP_084372.1	ILMN_2725504	004290170	S	1816	GGCAATCCCTGCAGTGTAACTTATGAGCCTGGCATGGATTCTCATGGAGT	11	+	83775328-83775377	11qC	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 (Ddx52), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	2700029C06Rik; ROK1	2700029C06Rik; ROK1
Mus musculus	MEEBO	ILMN_213123	ILMN_213123	OLFR638	scl0259124.1_251				22128752	NM_147120	Olfr638		ILMN_2633907	000020470	S	829	CTCCACTGGTCCATGTTCTCATGGCCAATATCTATCTGCTGGCACCTCCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_213124	ILMN_255990	LCA5L	NM_001001492.2	NM_001001492.2		385668	124517723	NM_001001492.2	Lca5l	NP_001001492.2	ILMN_2633912	004760181	S	107	CTAGAACATGTCAAAAAGTCTTACCTTGGAAACTTCATGAGTCCCACAGT	16	-	96407450-96407499	16qC4	Mus musculus Leber congenital amaurosis 5-like (Lca5l), mRNA.					
Mus musculus	Riken	ILMN_206714	ILMN_206714	A530058L02RIK	ri|A530058L02|PX00141H20|AK080082|1120					AK080082	A530058L02Rik		ILMN_2582155	002030470	S	959	TGCAACACCCTGTTAAGTTTCTCCACCCTTCTGGCTCAGCACCCAATGGC										
Mus musculus	RefSeq	ILMN_222354	ILMN_222354	ZFP710	NM_175433.4	NM_175433.4		209225	42734491	NM_175433.4	Zfp710	NP_780642.2	ILMN_2748384	006650630	S	4243	GGCTTCTGAAAAGGGTGACTCAGAAGCCCTGGCCGAATTCCACTCTAACT	7	+	87237454-87237503	7qD3	Mus musculus zinc finger protein 710 (Zfp710), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI324798; 5430400N05Rik; 9830165K13	AI324798; 5430400N05Rik; 9830165K13
Mus musculus	RefSeq	ILMN_212488	ILMN_222354	ZFP710	NM_175433.4	NM_175433.4		209225	42734491	NM_175433.4	Zfp710	NP_780642.2	ILMN_2627013	006900047	S	3683	AAAGCTGGTGGCTTCATCTATGCCTTTTTGGGGTTAGTCCCGCCTGCTCC	7	+	87236894-87236943	7qD3	Mus musculus zinc finger protein 710 (Zfp710), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI324798; 5430400N05Rik; 9830165K13	AI324798; 5430400N05Rik; 9830165K13
Mus musculus	RefSeq	ILMN_212700	ILMN_212700	NXF7	NM_130888.1	NM_130888.1		170722	30794231	NM_130888.1	Nxf7	NP_570958.1	ILMN_2629335	001190753	S	1687	GTCCTTTCTCAAGAGCAGCAAAGAATGGTGCAGGCTTTCTCCACCCAGTC	X	-	132117649-132117698	XqF1	Mus musculus nuclear RNA export factor 7 (Nxf7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]	Nx7; nxf-a; nxf-a2; Nxf6; nfx-a1	Nx7; nxf-a; nxf-a2; Nxf6; nfx-a1
Mus musculus	RefSeq	ILMN_219703	ILMN_219703	AFF4	NM_033565.1	NM_033565.1		93736	17298671	NM_033565.1	Aff4	NP_291043.1	ILMN_1251170	007100603	S	9868	GGTCCGTGTCCGTGAGTCTCAGTTATCCTGCACCAACAGACATCTTTAAT	11	+	53235101-53235150	11qB1.3	Mus musculus AF4/FMR2 family, member 4 (Aff4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107469; Alf4; Laf4l; AF5Q31; MCEF	MGC107469; Alf4; Laf4l; AF5Q31; MCEF
Mus musculus	RefSeq	ILMN_223370	ILMN_223370	RESP18	NM_009049.1	NM_009049.1		19711	6677716	NM_009049.1	Resp18	NP_033075.1	ILMN_1231724	002490279	S	635	CCTCCTCAATGCCCTCCAATCCAAGGGGCAATTCTTGGATGACCCAAATA	1	-	75268802-75268851	1qC3	Mus musculus regulated endocrine-specific protein 18 (Resp18), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI851012	AI851012
Mus musculus	MEEBO	ILMN_186445	ILMN_186445	ZFP278	scl056218.3_29	NM_019574.1			33469132	NM_019574.1	Zfp278		ILMN_1227430	003290220	S	9	AGGCACTCTTGGCCTCGCTTGGTAAGTTTTGGTCCCACTTCTTTCATTCC										
Mus musculus	Riken	ILMN_206686	ILMN_206686	E530018O14RIK	ri|E530018O14|PX00319G02|AK089160|2788					AK089160	E530018O14Rik		ILMN_1247102	002710102	S	2672	TAGGTATTTGTGGGGCAAAGAGGGGCGCATGTGCCGCGAGCACGGAAGCT										
Mus musculus	MEEBO	ILMN_188355	ILMN_188355	9930021F22RIK	scl54753.5.1_33						9930021F22Rik		ILMN_1219762	000060195	S	11	GCTGTTTGACCAACACAAAGCTGAATATGGCCTCTCCAAGACCCACGAGC										
Mus musculus	Riken	ILMN_201672	ILMN_201672	MBD1	ri|1810008C20|R000022K05|AK007371|1142					AK007371	Mbd1		ILMN_2543657	002970445	S	649	AAGGCAAGCATTTGGTTTCCGGTTCCGGGAGTAAGCAACCGCCGCAGAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_200537	ILMN_200537	LOC383308	XM_356977.1	XM_356977.1			38083424	XM_356977.1	LOC383308		ILMN_2539109	004780286	S	114	ACCCCGGTCGCAAAGATACGAATCTCTTAAGGGTGTTGACCCCAAGTTCC										
Mus musculus	RefSeq	ILMN_211477	ILMN_211477	DOT1L	NM_199322.1	NM_199322.1		208266	40556380	NM_199322.1	Dot1l	NP_955354.1	ILMN_2616274	002710504	S	4953	GTGAATCGGCGGCACCGCAGGAGGTGCTGGACTGGTCCAGTTTGTACTGT	10	+	80256351-80256400	10qC1	Mus musculus DOT1-like, histone H3 methyltransferase (S. cerevisiae) (Dot1l), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence IDA]	mDot1; A630076O07; AW907654; Dot1	mDot1; A630076O07; AW907654; Dot1
Mus musculus	RefSeq	ILMN_203262	ILMN_227561	LOC432945	XM_985948.1	XM_985948.1		432945	94399552	XM_985948.1	LOC432945	XP_991042.1	ILMN_1239262	005310139	S	1322	GGCTTTGCTGAGGCTGGGATTTGCTGACAACACTCTTGCATTGGTTCACC					PREDICTED: Mus musculus hypothetical gene supported by AK034246 (LOC432945), mRNA.					
Mus musculus	RefSeq	ILMN_208837	ILMN_208837	SPRED2	NM_033523.4	NM_033523.4		114716	146149276	NM_033523.4	Spred2	NP_277058.1	ILMN_2590010	003840543	S	2100	CCCCATTGGGTTTGCCTGTCGCTAACTAGCATAGGTCCCACAGAGATGTG				11qA3.1	Mus musculus sprouty-related, EVH1 domain containing 2 (Spred2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]	Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence IPI]	C79158	C79158
Mus musculus	RefSeq	ILMN_208837	ILMN_208837	SPRED2	NM_033523.4	NM_033523.4		114716	146149276	NM_033523.4	Spred2	NP_277058.1	ILMN_2598998	005390474	S	1994	TTGGTTTCCTGCCCCTCCTTCCCACCTTTCTGGTTCTGCAGACTTGGAGG				11qA3.1	Mus musculus sprouty-related, EVH1 domain containing 2 (Spred2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]	Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence IPI]	C79158	C79158
Mus musculus	RefSeq	ILMN_223782	ILMN_223782	1810008A18RIK	NM_133998.1	NM_133998.1		108707	19527217	NM_133998.1	1810008A18Rik	NP_598759.1	ILMN_2839142	003870743	S	2157	GGTCCGACGTAAGTTATGTGTCTAAGGCTTGGCAGAGCTGCACAGCTGGC	10	-	76930564-76930613	10qC1	Mus musculus RIKEN cDNA 1810008A18 gene (1810008A18Rik), mRNA.				AI303072	AI303072
Mus musculus	RefSeq	ILMN_223782	ILMN_223782	1810008A18RIK	NM_133998.1	NM_133998.1		108707	19527217	NM_133998.1	1810008A18Rik	NP_598759.1	ILMN_2839145	007380647	S	2228	GCAGGGCTCGCCCCTTCTCACCTGAGACAAAGCGTGTGTTCTCATGTGGA	10	-	76930493-76930542	10qC1	Mus musculus RIKEN cDNA 1810008A18 gene (1810008A18Rik), mRNA.				AI303072	AI303072
Mus musculus	RefSeq	ILMN_199042	ILMN_199042	LOC237408	XM_137196.3	XM_137196.3			38090579	XM_137196.3	LOC237408		ILMN_2533840	002350228	S	1492	CTGTAGTCACAGAAAATTCTGTGCTGGAGAGAAACCCTGTGGCAGTGCTT										
Mus musculus	Riken	ILMN_205035	ILMN_205035	A530095A18RIK	ri|A530095A18|PX00143C20|AK041257|3154					AK041257	A530095A18Rik		ILMN_1246259	003180047	S	3001	GCAAGTTCTTTTGAGTAGGTGGGGGGACAGCACCCTCGTAGAAGCAGGGG										
Mus musculus	RefSeq	ILMN_221512	ILMN_221512	LMF2	NM_178919.3	NM_178919.3		105847	142374539	NM_178919.3	Lmf2	NP_849250.1	ILMN_2736566	000510082	S	2034	AGAGAGGAAAAACGTAAGCAAACCTCCAAGAAGGATTCCAGAGCCGCCTC	15	-	89182082-89182131	15qE3	Mus musculus lipase maturation factor 2 (Lmf2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			AI451006; Tmem153	AI451006; Tmem153
Mus musculus	RefSeq	ILMN_221823	ILMN_221823	ISCU	NM_025526.3	NM_025526.3		66383	146134889	NM_025526.3	Iscu	NP_079802.1	ILMN_1234425	004640600	S	623	GTGCCGTTGATTACACCTGATCCCGTGTTCCTTTCAGCTCACGTGTGTCC				5qF	Mus musculus IscU iron-sulfur cluster scaffold homolog (E. coli) (Iscu), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310020H20Rik; Nifu; AA407971; Nifun	2310020H20Rik; Nifu; AA407971; Nifun
Mus musculus	RefSeq	ILMN_219690	ILMN_219690	OLFR943	NM_146326.1	NM_146326.1		258323	22380648	NM_146326.1	Olfr943	NP_666438.1	ILMN_2815177	006220681	S	710	GGTCTAAAGCCTTCAGTACTTGCAGTTCCCACATCTCTGCTGTTGCTGTC	9	+	38992474-38992523	9qA5.1	Mus musculus olfactory receptor 943 (Olfr943), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR171-44	MOR171-44
Mus musculus	RefSeq	ILMN_189202	ILMN_189202	ZFP42	NM_009556.2	NM_009556.2		22702	33457357	NM_009556.2	Zfp42	NP_033582.1	ILMN_2961604	001110372	S	825	CAGAGAAGCCAGAGGGCGGTGTGTACTGTGGTGTCTTATCGATGCTGGAG	8	-	44381307-44381356	8qA4	Mus musculus zinc finger protein 42 (Zfp42), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Rex-1; Rex1; Zfp-42; MGC107378	Rex-1; Rex1; Zfp-42; MGC107378
Mus musculus	RefSeq	ILMN_200193	ILMN_200193	LOC385906	XM_358994.1	XM_358994.1			38080868	XM_358994.1	LOC385906		ILMN_1246946	007150661	S	454	GCTGGAGAAGGGGAGTTCTGCCATGGATACCAACCTGCCTTAGCAGTAGG										
Mus musculus	RefSeq	ILMN_216404	ILMN_216404	NFKBIE	NM_008690.3	NM_008690.3		18037	118130686	NM_008690.3	Nfkbie	NP_032716.2	ILMN_2690551	006420450	S	2082	CAAGCACAGGGCCTTGCTGGGTATGGTAGGAGACCTAAGTGGTTCCTGCC	17	+	45699778-45699827	17qB3	Mus musculus nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon (Nfkbie), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence RCA]	IKBE	IKBE
Mus musculus	RefSeq	ILMN_216404	ILMN_216404	NFKBIE	NM_008690.3	NM_008690.3		18037	118130686	NM_008690.3	Nfkbie	NP_032716.2	ILMN_1238752	000990048	S	645	CTGTTGCTTGGCTTTCCTGCCCCAGGAAGTCCTGGACATTCAGAACAACC	17	+	45695489-45695538	17qB3	Mus musculus nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon (Nfkbie), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence RCA]	IKBE	IKBE
Mus musculus	Riken	ILMN_203876	ILMN_203876	A630052K13RIK	ri|A630052K13|PX00146B16|AK042023|2218					AK042023	A630052K13Rik		ILMN_2560643	004150553	S	2044	CTCCCTTTCTGTCTAGACAACAGAGGCGTATGGCTAGGGACCAGTCAACC										
Mus musculus	RefSeq	ILMN_260436	ILMN_260436	4930521A18RIK	NM_029062.2	NM_029062.2		74708	113461993	NM_029062.2	4930521A18Rik	NP_083338.1	ILMN_2980560	004010392	S	999	ACCATCTAGGTTATTACATGGTCAATCACACAGCAGAGCTATGACCATGA	1	+	31280682-31280731	1qB	Mus musculus RIKEN cDNA 4930521A18 gene (4930521A18Rik), mRNA.				MGC130206	MGC130206
Mus musculus	RefSeq	ILMN_196411	ILMN_260436	4930521A18RIK	NM_029062.2	NM_029062.2		74708	113461993	NM_029062.2	4930521A18Rik	NP_083338.1	ILMN_2645001	006580681	S	1172	CATTGATTTTAACATGATTTAGGATGTTTTCAATCTAGGGCTTCAATATT	1	+	31280855-31280904	1qB	Mus musculus RIKEN cDNA 4930521A18 gene (4930521A18Rik), mRNA.				MGC130206	MGC130206
Mus musculus	RefSeq	ILMN_214847	ILMN_235307	OTOR	NM_020595.2	NM_020595.2		57329	50400075	NM_020595.2	Otor	NP_065620.1	ILMN_2652615	006840328	S	833	TGATAACTTCCTATTGTTACTTTTTATATCTGATGCCCTTGGATAGAAGA	2	+	142907352-142907401	2qG1	Mus musculus otoraplin (Otor), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]	The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]		CDRAP; Fdp; MIAL; MIA	CDRAP; Fdp; MIAL; MIA
Mus musculus	MEEBO	ILMN_218761	ILMN_218761	C230066G23RIK	scl27494.1.1_151	NM_175288.2			31341529	NM_175288.2	C230066G23Rik		ILMN_1243381	007570274	S	885	GTTGATTAACATGCCACTATGTACCGGGCTATGTTCTACTAAGAATTATC										
Mus musculus	RefSeq	ILMN_219053	ILMN_219053	GBAS	NM_008095.3	NM_008095.3		14467	142369366	NM_008095.3	Gbas	NP_032121.2	ILMN_2703585	002810746	S	742	TCCGGAACGCGGCCTGGCACAAGCATGGCTGGGAGGAGCTCGTGTACTAT	5	+	130260748-130260797	5qG1.3	Mus musculus glioblastoma amplified sequence (Gbas), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AV006093; Nipsnap2	AV006093; Nipsnap2
Mus musculus	RefSeq	ILMN_223305	ILMN_223305	SQRDL	NM_021507.4	NM_021507.4		59010	31981548	NM_021507.4	Sqrdl	NP_067482.3	ILMN_1247947	002600424	S	1816	TCGCAGTTACTGATTGACATGACAGATACAAAGGACTCAGAACCTCACCC	2	+	122635120-122635169	2qE5	Mus musculus sulfide quinone reductase-like (yeast) (Sqrdl), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	0610039J17Rik; 4930557M22Rik	0610039J17Rik; 4930557M22Rik
Mus musculus	RefSeq	ILMN_212827	ILMN_328070	RERE	NM_001085492.1	NM_001085492.1		68703	148234284	NM_001085492.1	Rere	NP_001078961.1	ILMN_2630811	000290148	S	7330	CCAATGGATAACACAGTGTAAACAGTAGACACCCAGAAAATCGTGACTTC				4qE2	Mus musculus arginine glutamic acid dipeptide (RE) repeats (Rere), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IPI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI414665; Atr2; 1110033A15Rik; mKIAA0458; atrophin-2; ATN1L; ARG; DNB1; AW742570; ARP	AI414665; Atr2; 1110033A15Rik; mKIAA0458; atrophin-2; ATN1L; ARG; DNB1; AW742570; ARP
Mus musculus	RefSeq	ILMN_201254	ILMN_201254	LOC384980	XM_357971.1	XM_357971.1			38090178	XM_357971.1	LOC384980		ILMN_1219110	001690605	S	544	AAGGGGGTCAACAGCGGGCCATCAACTCACCGCTCCAAGAACAACTACAG										
Mus musculus	MEEBO	ILMN_192062	ILMN_192062	ZFR	scl022763.3_29				7106452	NM_011767	Zfr		ILMN_2484627	007160685	S	4	TTTCTATGATTAAAAACTTATTGTACAGTGTCAGGTATTATATGGATGGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210425	ILMN_210425	RFPL4	NM_138954.1	NM_138954.1		192658	20336739	NM_138954.1	Rfpl4	NP_620404.1	ILMN_2872334	000990598	S	1148	CCTTGGGTATGAAAGCTGCTATGACAGTCGCTGAGTACTCATAACCTAGC	7	-	4713338-4713387	7qA1	Mus musculus ret finger protein-like 4 (Rfpl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D7Ertd486e	D7Ertd486e
Mus musculus	RefSeq	ILMN_192943	ILMN_225389	CD68	NM_009853.1	NM_009853.1		12514	6753351	NM_009853.1	Cd68	NP_033983.1	ILMN_2689785	006560341	S	717	GGCGCAGAATTCATCTCTTCGAGAGCTCCAAGCTCCCTTGGGCCAAAGCT	11	-	69478360-69478409	11qB3	Mus musculus CD68 antigen (Cd68), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Scard1; gp110	Scard1; gp110
Mus musculus	RefSeq	ILMN_215203	ILMN_215203	FAM113B	NM_172293.3	NM_172293.3		239647	142374053	NM_172293.3	Fam113b	NP_758497.1	ILMN_1237625	002120187	S	1821	AATCCTTGGAGAGACAGACCCAGGCGACCGCCAAAACATTCTCCAGCCGG	15	+	97215743-97215792	15qF1	Mus musculus family with sequence similarity 113, member B (Fam113b), mRNA.				MGC47262	MGC47262
Mus musculus	RefSeq	ILMN_215203	ILMN_215203	FAM113B	NM_172293.3	NM_172293.3		239647	142374053	NM_172293.3	Fam113b	NP_758497.1	ILMN_2656715	001690386	S	1067	GCTAGTGTGGAACACTGCTATGCCTTTGGGTGACAAGATCAAGGCGGCCT	15	+	97214989-97215038	15qF1	Mus musculus family with sequence similarity 113, member B (Fam113b), mRNA.				MGC47262	MGC47262
Mus musculus	RefSeq	ILMN_188325	ILMN_245244	ZMYM1	NM_026670.4	NM_026670.4		68310	118129862	NM_026670.4	Zmym1	NP_080946.3	ILMN_2451699	003180541	S	3630	GCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACTCATTGGTAACA	4	-	126724490-126724539	4qD2.2	Mus musculus zinc finger, MYM domain containing 1 (Zmym1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW209050; 5830412B09Rik	AW209050; 5830412B09Rik
Mus musculus	RefSeq	ILMN_245244	ILMN_245244	ZMYM1	NM_026670.4	NM_026670.4		68310	118129862	NM_026670.4	Zmym1	NP_080946.3	ILMN_2815515	000650326	S	3625	AGTAAGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACTCATTGG	4	-	126724495-126724544	4qD2.2	Mus musculus zinc finger, MYM domain containing 1 (Zmym1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW209050; 5830412B09Rik	AW209050; 5830412B09Rik
Mus musculus	RefSeq	ILMN_204979	ILMN_245244	ZMYM1	NM_026670.4	NM_026670.4		68310	118129862	NM_026670.4	Zmym1	NP_080946.3	ILMN_1227630	005390243	S	2311	TGACGGACTGCCTTCCGGAGGTCGTTGAGGTGCTGGCGTCAGTGTCACGC	4	-	126725809-126725858	4qD2.2	Mus musculus zinc finger, MYM domain containing 1 (Zmym1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW209050; 5830412B09Rik	AW209050; 5830412B09Rik
Mus musculus	RefSeq	ILMN_198640	ILMN_244068	GM378	XM_908648.1	XM_908648.1		213454	83002893	XM_908648.1	Gm378	XP_913741.1	ILMN_1240049	004890196	S	617	TGGGACCACCAGAACCCGCTGCTGTTCCACAGCCAGGCCATTCAAGTGAA				XqD	PREDICTED: Mus musculus gene model 378, (NCBI) (Gm378), mRNA.					
Mus musculus	RefSeq	ILMN_223149	ILMN_223149	GNA15	NM_010304.3	NM_010304.3		14676	34328487	NM_010304.3	Gna15	NP_034434.1	ILMN_2759933	003310577	S	1728	GGGCCCTGTTCACATCTTCCTGTGGGGACCATTTCATCTTACCAAAGGGG	10	-	80965242-80965291	10qC1	Mus musculus guanine nucleotide binding protein, alpha 15 (Gna15), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IMP]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IGI]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IGI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	G[a]15; Galpha15	G[a]15; Galpha15
Mus musculus	Riken	ILMN_203294	ILMN_203294	C330009J20RIK	ri|C330009J20|PX00076M05|AK049164|1479					AK049164	C330009J20Rik		ILMN_2556208	001570343	S	515	ACAAGTCTGGAAAACTGGAAAATAAACGAAGTTCCTCTCTGAGTAGAAAA										
Mus musculus	RefSeq	ILMN_197921	ILMN_197921	LOC381029	XM_354941.1	XM_354941.1			38079675	XM_354941.1	LOC381029		ILMN_1248787	003120593	S	2107	CTGGCCCTAAGCGCAGGTTTGGTGTGAGTGACCTTGTTCAGCTGTGTGAA										
Mus musculus	Riken	ILMN_206039	ILMN_206039	D030065B14RIK	ri|D030065B14|PX00181L05|AK051070|3642					AK051070	D030065B14Rik		ILMN_1256936	002140672	S	3333	GTGGGCTCCTGGGATTGAACTCCAGTTGCTAGGTTTGCATGGCAAGTGCC										
Mus musculus	Riken	ILMN_203707	ILMN_203707	9630035P19RIK	ri|9630035P19|PX00116A10|AK036099|2752					AK036099	9630035P19Rik		ILMN_1241318	006560114	S	2696	TAGAGGAGATCTGTTAGCACACGCCAACCTTCCTGCCTCCTCCAACCTCC										
Mus musculus	MEEBO	ILMN_217804	ILMN_217804	TBX15	scl0021383.1_68	NM_011534.1			6755719	NM_011534.1	Tbx15		ILMN_2687794	004050333	S	2166	CACTATCAAGGTGATGGCGGCCAAGACTCCAGAATCTCTGTGGGTGGATC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201125	ILMN_201125	LOC382012	XM_356080.1	XM_356080.1			38089301	XM_356080.1	LOC382012		ILMN_1233392	000630450	S	328	CACGGGAGAGCGGCAGGCACAGGGAACGGCTGCTAGTGTATGTTTGGAAT										
Mus musculus	RefSeq	ILMN_209552	ILMN_209552	HRH3	NM_133849.1	NM_133849.1		99296	19527065	NM_133849.1	Hrh3	NP_598610.1	ILMN_1256117	003400201	S	1845	CCAAGACGATCTGGGGCGATGCCCTTTGCTGCCGCTGTCTCTTCCTTAAT	2	-	180029420-180029469	2qH4	Mus musculus histamine receptor H 3 (Hrh3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with histamine to initiate a change in cell activity. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans [goid 4969] [evidence IEA]	AW049250	AW049250
Mus musculus	RefSeq	ILMN_190689	ILMN_234046	PVRL3	NM_021495.2	NM_021495.2		58998	118130458	NM_021495.2	Pvrl3	NP_067470.1	ILMN_1250766	005670465	S	1805	GGCTCCGTAATTTCCAGGAGGGAGTGGTATGTCTAACAGCCACTGACGCG	16	-	46448486-46448500:46448501-46448535	16qB5	Mus musculus poliovirus receptor-related 3 (Pvrl3), transcript variant alpha, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form [goid 60042] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2610301B19Rik; AA407785; 4921513D19Rik; 3000002N23Rik; AW538082; AU016832	2610301B19Rik; AA407785; 4921513D19Rik; 3000002N23Rik; AW538082; AU016832
Mus musculus	RefSeq	ILMN_201545	ILMN_201545	PPP1R14B	NM_008889.1	NM_008889.1			6679402	NM_008889.1	Ppp1r14b		ILMN_1242221	002260402	S	669	CGGGGCATGCAGAAGCTGAGCACACCCCAGAAGAAATGAGGGTCCTGACT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_261917	ILMN_261917	EML1	NM_001043335.1	NM_001043335.1		68519	112807167	NM_001043335.1	Eml1	NP_001036800.1	ILMN_3137207	000780437	A	842	AACCGCACGGGCTCAACCAGTAGCTCCTCCAGCGGCAAGAAGAACAGTGA	12	+	109726578-109726627	12qF1	Mus musculus echinoderm microtubule associated protein like 1 (Eml1), transcript variant 1, mRNA. XM_901775 XM_901779 XM_978946 XM_978978 XM_979015 XM_979053 XM_979124 XM_979166 XM_979204	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110008N23Rik; EMAP; MGC158992; A930030P13Rik; AI847476; AI853955; ELP79; EMAPL; AA171013	1110008N23Rik; EMAP; MGC158992; A930030P13Rik; AI847476; AI853955; ELP79; EMAPL; AA171013
Mus musculus	RefSeq	ILMN_223584	ILMN_261917	EML1	NM_001043335.1	NM_001043335.1		68519	112807167	NM_001043335.1	Eml1	NP_001036800.1	ILMN_1214866	000730692	S	3824	GTCTGAAGGTGTCGAGAAGGCCTTACCTGTGGTGTGACAGATTGAATTGA	12	+	109777438-109777487	12qF1	Mus musculus echinoderm microtubule associated protein like 1 (Eml1), transcript variant 1, mRNA. XM_901775 XM_901779 XM_978946 XM_978978 XM_979015 XM_979053 XM_979124 XM_979166 XM_979204	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110008N23Rik; EMAP; MGC158992; A930030P13Rik; AI847476; AI853955; ELP79; EMAPL; AA171013	1110008N23Rik; EMAP; MGC158992; A930030P13Rik; AI847476; AI853955; ELP79; EMAPL; AA171013
Mus musculus	RefSeq	ILMN_217068	ILMN_217068	RPL22L1	NM_026517.2	NM_026517.2		68028	142387922	NM_026517.2	Rpl22l1	NP_080793.1	ILMN_2678755	002260093	S	160	GGAAAAACTGGAAATCTTGGCAATGTTGTTCACATTGAACGCCTGAAGAA	3	+	28705692-28705741	3qA3	Mus musculus ribosomal protein L22 like 1 (Rpl22l1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	3110001N18Rik; AU041196	3110001N18Rik; AU041196
Mus musculus	MEEBO	ILMN_223095	ILMN_223095	4930550G17RIK	scl20821.2.1_49	XM_130264.1			20837109	XM_130264.1	4930550G17Rik		ILMN_1243524	006400300	S	428	GGAGCAACCAATAGCATCTCTTCAACATATCTAAAACTTAAATAAATGTT										
Mus musculus	RefSeq	ILMN_217244	ILMN_217244	ARL8A	NM_026823.2	NM_026823.2		68724	118130256	NM_026823.2	Arl8a	NP_081099.1	ILMN_2680781	001110382	S	1578	GTTCCTCTTCCTTTTTACAGTTTTCAGCTCATATTTAACCTCTGTTTGGA	1	+	137052721-137052770	1qE4	Mus musculus ADP-ribosylation factor-like 8A (Arl8a), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Arl10b; 1110033P22Rik; gie2	Arl10b; 1110033P22Rik; gie2
Mus musculus	Riken	ILMN_203566	ILMN_203566	9430065F12RIK	ri|9430065F12|PX00110E01|AK034948|2981					AK034948	9430065F12Rik		ILMN_1230858	001940367	S	2358	CTGAGGCCTAGCTCTAGAAACTGTGGGTTGAGACCCCATACAAAGCTGTG										
Mus musculus	RefSeq	ILMN_196025	ILMN_237631	1700021K02RIK	NM_001017419.1	NM_001017419.1		65971	63079688	NM_001017419.1	1700021K02Rik	NP_001017419.1	ILMN_1255054	002350128	S	1203	GACCCAGAGGAGAAAACGACCAAGGCTGAAAGCTGAAGAGCCCAGACCAG	10	+	60651388-60651423:60651424-60651437	10qB4	Mus musculus RIKEN cDNA 1700021K02 gene (1700021K02Rik), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a spermatid cell [goid 48515] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI428928; Titest; Spatial	AI428928; Titest; Spatial
Mus musculus	RefSeq	ILMN_219108	ILMN_219108	BC030183	NM_182783.1	NM_182783.1		230766	33354246	NM_182783.1	BC030183	NP_877584.1	ILMN_1235062	003120402	S	557	GAGATGGAGTTAGAGTCTGGGACTGGCTTGCCTCTGGCCCCACCGCTGCG	4	-	129255403-129255452	4qD2.2	Mus musculus cDNA sequence BC030183 (BC030183), mRNA.				MGC29254	MGC29254
Mus musculus	Riken	ILMN_204092	ILMN_204092	B230316E19RIK	ri|B230316E19|PX00159G22|AK045875|1134					AK045875	B230316E19Rik		ILMN_1220424	000070010	S	976	GGGCATTTACAATAGGGAGTCTGAAGGGTTTCAAGGGTGATGGAGCTGGC										
Mus musculus	Riken	ILMN_205549	ILMN_205549	C430049K18RIK	ri|C430049K18|PX00317E24|AK082937|1263					AK082937	C430049K18Rik		ILMN_1259447	006590468	S	1095	AAGAAACCTGGTCAGCAAGCACCTGAGATTCCTGGAGTGCCTCCCCGTGC										
Mus musculus	RefSeq	ILMN_219367	ILMN_222505	TMEM132A	NM_133804.2	NM_133804.2		98170	88196787	NM_133804.2	Tmem132a	NP_598565.2	ILMN_2707798	006130445	S	3466	TTCTGTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGC				19qA	Mus musculus transmembrane protein 132A (Tmem132a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			Hspa5bp1; 6720481D13Rik; Orai1; R74613	Hspa5bp1; 6720481D13Rik; Orai1; R74613
Mus musculus	RefSeq	ILMN_222505	ILMN_222505	TMEM132A	NM_133804.2	NM_133804.2		98170	88196787	NM_133804.2	Tmem132a	NP_598565.2	ILMN_2750588	007100273	S	3410	GGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGG	19	-	10932348-10932397	19qA	Mus musculus transmembrane protein 132A (Tmem132a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			Hspa5bp1; 6720481D13Rik; Orai1; R74613	Hspa5bp1; 6720481D13Rik; Orai1; R74613
Mus musculus	RefSeq	ILMN_222505	ILMN_222505	TMEM132A	NM_133804.2	NM_133804.2		98170	88196787	NM_133804.2	Tmem132a	NP_598565.2	ILMN_1226606	000670072	S	3407	GAGGGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTT	19	-	10932351-10932400	19qA	Mus musculus transmembrane protein 132A (Tmem132a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			Hspa5bp1; 6720481D13Rik; Orai1; R74613	Hspa5bp1; 6720481D13Rik; Orai1; R74613
Mus musculus	RefSeq	ILMN_186119	ILMN_233305	FBXO43	NM_001081253.1	NM_001081253.1		78803	124486946	NM_001081253.1	Fbxo43	NP_001074722.1	ILMN_2734262	003420553	S	2709	TATTGCTCCATGTAACCTTTTAAATTTGTGCATTTCATAACAATGTGTTG	15	-	36081091-36081140	15qB3.1	Mus musculus F-box protein 43 (Fbxo43), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107440; 4930533G20Rik; Emi2	MGC107440; 4930533G20Rik; Emi2
Mus musculus	RefSeq	ILMN_198053	ILMN_198053	LOC278266	XM_204456.3	XM_204456.3			38081017	XM_204456.3	LOC278266		ILMN_1230652	002030338	S	999	CCATGACAAAACCAAATTCACACATTATCGCTTCACGAATCCAGCCCTTC										
Mus musculus	RefSeq	ILMN_215966	ILMN_215966	CD209E	NM_130905.2	NM_130905.2		170780	24475796	NM_130905.2	Cd209e	NP_570975.1	ILMN_2665757	006020630	S	1661	GACACTTTGAACACTCAACTTGGTCATATTTGGTGTCTATTTATCTACCC	8	-	3848033-3848082	8qA1.1	Mus musculus CD209e antigen (Cd209e), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]	MGC130080; SIGNR4; mSIGNR4; MGC130079	MGC130080; SIGNR4; mSIGNR4; MGC130079
Mus musculus	MEEBO	ILMN_191220	ILMN_191220	1700007P14RIK	scl0075474.1_162						1700007P14Rik		ILMN_1258826	000540736	S	1	CCGCCAGCCCCCGTCAACTCAAGCATCCACCTAGAATCCAGCAACGATCT										
Mus musculus	RefSeq	ILMN_219607	ILMN_219607	ELMOD2	NM_178736.4	NM_178736.4		244548	142367620	NM_178736.4	Elmod2	NP_848851.2	ILMN_1219931	002320487	S	4267	GTGGATGCTTGAGCTGCCCCTCATCCCTATTTAAGTCGTTTGAGTTCAGG	8	-	85836862-85836911	8qC2	Mus musculus ELMO domain containing 2 (Elmod2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9830169G11Rik	9830169G11Rik
Mus musculus	RefSeq	ILMN_209211	ILMN_209211	SLC4A3	NM_009208.1	NM_009208.1		20536	6678022	NM_009208.1	Slc4a3	NP_033234.1	ILMN_2782061	002900221	S	3899	CACCTTGGCGATTCACAGACCCTAGGAACCCAGCACCAGGGCCAGGCATT	1	+	75442067-75442116	1qC4	Mus musculus solute carrier family 4 (anion exchanger), member 3 (Slc4a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 15380] [evidence IEA];  [goid 5452] [evidence IEA]	Ae3; A930038D23Rik	Ae3; A930038D23Rik
Mus musculus	RefSeq	ILMN_209211	ILMN_209211	SLC4A3	NM_009208.1	NM_009208.1		20536	6678022	NM_009208.1	Slc4a3	NP_033234.1	ILMN_2675026	004540497	S	3787	AGGCGCTGGACTCTGAAGATGCGGAGCCGAACTTTGACGAGGATGGTCAG	1	+	75440943-75440948:75441961-75442004	1qC4	Mus musculus solute carrier family 4 (anion exchanger), member 3 (Slc4a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 15380] [evidence IEA];  [goid 5452] [evidence IEA]	Ae3; A930038D23Rik	Ae3; A930038D23Rik
Mus musculus	RefSeq	ILMN_211062	ILMN_211062	NOL14	NM_029278.2	NM_029278.2		75416	114158700	NM_029278.2	Nol14	NP_083554.2	ILMN_1257117	004290241	S	2609	GTAAAACAGCTTTTTAATAGCCTGGCCACGCAAGAAGGTGAATGGAAGGC	5	-	34981228-34981277	5qB2	Mus musculus nucleolar protein 14 (Nol14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		2610033H07Rik	2610033H07Rik
Mus musculus	RefSeq	ILMN_221855	ILMN_233310	SNURF	NM_033174.2	NM_033174.2		84704	133725814	NM_033174.2	Snurf	NP_149409.1	ILMN_2741277	000620209	S	58	GGGAGCCGGAGATGCCAGACGCTTGGTTCTGAGGAGTGATTTGCAACGCA	7	-	67149935-67149935:67149936-67149984	7qC	Mus musculus SNRPN upstream reading frame (Snurf), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Snrpn; MGC18604; MGC30325; 2410045I01Rik	Snrpn; MGC18604; MGC30325; 2410045I01Rik
Mus musculus	RefSeq	ILMN_212953	ILMN_233310	SNURF	NM_033174.2	NM_033174.2		84704	133725814	NM_033174.2	Snurf	NP_149409.1	ILMN_2748091	001170743	S	986	TAGCATTGCAGGAGCCCCAACCCAGTACCCGCCAGGACGGGGAACTCCAC	7	-	67129943-67129992	7qC	Mus musculus SNRPN upstream reading frame (Snurf), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Snrpn; MGC18604; MGC30325; 2410045I01Rik	Snrpn; MGC18604; MGC30325; 2410045I01Rik
Mus musculus	RefSeq	ILMN_212953	ILMN_233310	SNURF	NM_033174.2	NM_033174.2		84704	133725814	NM_033174.2	Snurf	NP_149409.1	ILMN_1247894	003130246	S	1287	TTGTGTACCTGCAAGCTTTTTGACCCCTCTTACTGCATTAACTATAGATA	7	-	67128021-67128070	7qC	Mus musculus SNRPN upstream reading frame (Snurf), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Snrpn; MGC18604; MGC30325; 2410045I01Rik	Snrpn; MGC18604; MGC30325; 2410045I01Rik
Mus musculus	RefSeq	ILMN_209153	ILMN_246667	PVRL4	NM_027893.2	NM_027893.2		71740	142382903	NM_027893.2	Pvrl4	NP_082169.1	ILMN_1235878	001440014	S	3438	GGTAGGGCCGTGTGGACATAACCTCCTTTTGGGGAAGCCAGTGCCTTAGT	1	+	173318577-173318626	1qH3	Mus musculus poliovirus receptor-related 4 (Pvrl4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	1200017F15Rik; Prr4	1200017F15Rik; Prr4
Mus musculus	Riken	ILMN_204823	ILMN_204823	C530046F07RIK	ri|C530046F07|PX00083I23|AK049748|2776					AK049748	C530046F07Rik		ILMN_1237694	001070048	S	173	TGGAAAGGATCAGTGCTGCCATGGAAAGGTGTTCCCTGCTGCCCGTCACC										
Mus musculus	RefSeq	ILMN_219439	ILMN_219439	METTL4	NM_176917.4	NM_176917.4		76781	142367739	NM_176917.4	Mettl4	NP_795891.2	ILMN_3163504	000780471	A	1899	GCCAGGTTGGATGAGTTGGGGCAACGAAGTCCTCAAGTTTCAGCACATGG	17	-	95126621-95126670	17qE5	Mus musculus methyltransferase like 4 (Mettl4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	A730091E08Rik; AV296509; HsT661; 2410198H06Rik	A730091E08Rik; AV296509; HsT661; 2410198H06Rik
Mus musculus	RefSeq	ILMN_191830	ILMN_235530	LOC668239	XM_001000226.2	XM_001000226.2		668239	149261911	XM_001000226.2	LOC668239	XP_001000226.1	ILMN_1222723	004640630	S	284	CCCCGAGGATCTCTACCATTTGATTAAGAAAGCTGTTGCTGTCCGAAAGC	11	-	61019376-61019425	11qB2	PREDICTED: Mus musculus similar to Rps13 protein (LOC668239), mRNA.					
Mus musculus	RefSeq	ILMN_213739	ILMN_312320	LOC100048622	XM_001480443.1	XM_001480443.1		100048622	149249668	XM_001480443.1	LOC100048622	XP_001480493.1	ILMN_2677056	005340121	S	2458	CCACAGTTGTGCCTTATTGTCCCATTAAAGTTGTATTCCTCAATTCATCA					PREDICTED: Mus musculus similar to EF-hand Ca2+ binding protein p22 (LOC100048622), mRNA.					
Mus musculus	RefSeq	ILMN_213739	ILMN_312320	LOC100048622	XM_001480443.1	XM_001480443.1		100048622	149249668	XM_001480443.1	LOC100048622	XP_001480493.1	ILMN_1252602	004860014	S	131	CTCCCGTCACGGTGATGGGGTCTCGGGCCTCCACGTTATTGCGGGACGAA					PREDICTED: Mus musculus similar to EF-hand Ca2+ binding protein p22 (LOC100048622), mRNA.					
Mus musculus	RefSeq	ILMN_209245	ILMN_209245	POLR3H	NM_030229.4	NM_030229.4		78929	146149315	NM_030229.4	Polr3h	NP_084505.2	ILMN_1218993	006060546	S	1391	CCCAGTCTATCCTATGAACTTCTGGCTTTCAGTGACGCAGAATACATTTA				15qE1	Mus musculus polymerase (RNA) III (DNA directed) polypeptide H (Polr3h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	5031409G22Rik; RPC8	5031409G22Rik; RPC8
Mus musculus	RefSeq	ILMN_199326	ILMN_251854	EG666747	XM_001000540.2	XM_001000540.2		666747	149260145	XM_001000540.2	EG666747	XP_001000540.1	ILMN_1219494	000430487	S	2073	AGAGCACTGACTCTTGGTTAAGGGACTGTTCTTCTGAAGGTCCTGTGTTC	9	-	88979601-88979650	9qE3.1	PREDICTED: Mus musculus predicted gene, EG666747, transcript variant 2 (EG666747), mRNA.					
Mus musculus	RefSeq	ILMN_216341	ILMN_216341	EDA	NM_010099.2	NM_010099.2		13607	133893370	NM_010099.2	Eda	NP_034229.1	ILMN_2669938	001050551	S	4467	CAAAGCTAGAAGTGTTTATCTCCCTTCAGGAGCCTGGTGAGGCAGGGAGT	X	+	97595611-97595660	XqC3	Mus musculus ectodysplasin-A (Eda), mRNA. XM_919331	The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transfer of NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters, from the cytoplasm into the nucleus, across the nuclear membrane [goid 42346] [evidence IDA]; The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity [goid 7431] [evidence IDA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]	Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	HED; Ta; Eda-A2; XLHED; Eda-A1; EDA1; Ed1; tabby	HED; Ta; Eda-A2; XLHED; Eda-A1; EDA1; Ed1; tabby
Mus musculus	Riken	ILMN_205378	ILMN_205378	D130023B06RIK	ri|D130023B06|PX00183O17|AK051247|2070					AK051247	D130023B06Rik		ILMN_1244837	002190181	S	1962	TTTGTCAGTGGAGCTAGGAATGGTTCATTCATTTGCAATAACTGCTGTGC										
Mus musculus	Riken	ILMN_204282	ILMN_204282	9630007E23RIK	ri|9630007E23|PX00115M09|AK035814|1461					AK035814	9630007E23Rik		ILMN_1253602	001690347	S	1083	GCAGCTATGTGTCCCGTATCAGTGCCCCAAGCATGGACAGCAGTTTCTGG										
Mus musculus	RefSeq	ILMN_193591	ILMN_193591	OVOL2	NM_026924.3	NM_026924.3		107586	118130293	NM_026924.3	Ovol2	NP_081200.2	ILMN_2498592	000110500	S	1347	GAGAGAGGTGTTCTTAAAGAGACTGTCATCTTAAGGTGCCTTGAAATGCT	2	-	144130987-144131036	2qG1	Mus musculus ovo-like 2 (Drosophila) (Ovol2), transcript variant A, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The process by which the edges of the neural plate thicken and move up to form a U-shaped structure called the neural groove [goid 1842] [evidence IMP]; The process by which the anatomical structures of the gut are generated and organized during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48558] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1810007D21Rik; Zfp339; 1700108N11Rik; Ovo2; M-OVO-A; movo2; M-OVO-B; MOVO; M-OVO	1810007D21Rik; Zfp339; 1700108N11Rik; Ovo2; M-OVO-A; movo2; M-OVO-B; MOVO; M-OVO
Mus musculus	MEEBO	ILMN_221927	ILMN_221927	3110050N22RIK	scl26633.7.1_20	NM_173181.1			27502350	NM_173181.1	3110050N22Rik		ILMN_2761169	004050433	S	2945	CCATACTTTACTCTCATGCTGCTGTGCTGGGCAATAGTTTTTAAGCAGAC										
Mus musculus	RefSeq	ILMN_209895	ILMN_209895	DHX33	NM_178367.4	NM_178367.4		216877	109637749	NM_178367.4	Dhx33	NP_848144.3	ILMN_2600202	006550750	S	4868	CCGCGCATCTAAGATGCCATTCCTTGAGCACATAAACTAGACTATACCGG	11	-	70797854-70797903	11qB4	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 33 (Dhx33), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	3110057P17Rik; 9430096J02Rik; Ddx33	3110057P17Rik; 9430096J02Rik; Ddx33
Mus musculus	RefSeq	ILMN_254698	ILMN_254698	ACAA2	NM_177470.2	NM_177470.2		52538	31343391	NM_177470.2	Acaa2	NP_803421.1	ILMN_2788984	004640187	S	1219	CCAGAACACAGCCTGAAGGCATCACAAGCACACTGCCCACACTTACTGGG	18	+	74931291-74931304:74931305-74931340	18qE2	Mus musculus acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) (Acaa2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA [goid 3988] [evidence IEA]	AI255831; D18Ertd240e; AI265397; 0610011L04Rik	AI255831; D18Ertd240e; AI265397; 0610011L04Rik
Mus musculus	RefSeq	ILMN_191860	ILMN_231865	LRRC49	NM_145616.3	NM_145616.3		102747	142370683	NM_145616.3	Lrrc49	NP_663591.2	ILMN_1256378	000150121	S	2368	GCAGGTTAGACATGATGAGACACCACCACTACCGCACAGTTTAGAAAGAG	9	-	60435388-60435437	9qB	Mus musculus leucine rich repeat containing 49 (Lrrc49), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D430025H09Rik; AW050057; AI430817	D430025H09Rik; AW050057; AI430817
Mus musculus	RefSeq	ILMN_191860	ILMN_231865	LRRC49	NM_145616.3	NM_145616.3		102747	142370683	NM_145616.3	Lrrc49	NP_663591.2	ILMN_2665001	002120437	S	271	GCCTCGTAATAAGTCATCATGCATCTCATCCACAACTAACGTGACAGACC	9	-	60528434-60528483	9qB	Mus musculus leucine rich repeat containing 49 (Lrrc49), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D430025H09Rik; AW050057; AI430817	D430025H09Rik; AW050057; AI430817
Mus musculus	RefSeq	ILMN_201523	ILMN_201523	SLCO1A4	NM_030687.1	NM_030687.1		28250	13507613	NM_030687.1	Slco1a4	NP_109612.1	ILMN_2648990	004540639	S	3228	CATAGAGCACATGACTATTAACATTAATAATAACCGTAGAGTAAAAGCTT	6	-	141754506-141754555	6qG2	Mus musculus solute carrier organic anion transporter family, member 1a4 (Slco1a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IDA]	Slc21a5; AI785519; Oatp2	Slc21a5; AI785519; Oatp2
Mus musculus	RefSeq	ILMN_201523	ILMN_201523	SLCO1A4	NM_030687.1	NM_030687.1		28250	13507613	NM_030687.1	Slco1a4	NP_109612.1	ILMN_1258323	001440037	S	1502	AGCTATATAATGACCTGTGACAATTTCCCAGTTGCTGGATTAACCACCTC	6	-	141766247-141766296	6qG2	Mus musculus solute carrier organic anion transporter family, member 1a4 (Slco1a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IDA]	Slc21a5; AI785519; Oatp2	Slc21a5; AI785519; Oatp2
Mus musculus	MEEBO	ILMN_195216	ILMN_195216	AW123240	scl29359.1.436_3						AW123240		ILMN_2513570	005310092	S	6	CACATTTGCTGATTGTGGGCCATAAATATGCTTTTAGTACTGCTTTGCTG										
Mus musculus	RefSeq	ILMN_227486	ILMN_227486	BC056474	NM_001001493.2	NM_001001493.2		414077	59709456	NM_001001493.2	BC056474	NP_001001493.1	ILMN_2939185	001410332	S	486	TGGGCTCCCAGCTGAATGGAAGGAAGTTGGCTCTTTCTTTGGGGCCCTGC	8	+	87606025-87606074	8qC3	Mus musculus cDNA sequence BC056474 (BC056474), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC107693	MGC107693
Mus musculus	RefSeq	ILMN_209402	ILMN_209402	CLDN7	NM_016887.2	NM_016887.2		53624	31560439	NM_016887.2	Cldn7	NP_058583.1	ILMN_2595477	004480768	S	1105	TCCTGGCCACTCCACCTCCAAACATCATGTATAGTTTGCTTGGGGGGAGG	11	+	69783955-69784004	11qB3	Mus musculus claudin 7 (Cldn7), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221221	ILMN_221221	TMEM107	NM_028336.2	NM_028336.2		66910	141802127	NM_028336.2	Tmem107	NP_082612.1	ILMN_1234294	003890397	S	1166	CACATAGCGCTTCTAATTTGCCGCGTGTGAGGGGAGCATTCTGGGATGGT	11	+	68886696-68886745	11qB3	Mus musculus transmembrane protein 107 (Tmem107), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-19I2.5; 2810049P21Rik; 1110004B13Rik	RP23-19I2.5; 2810049P21Rik; 1110004B13Rik
Mus musculus	RefSeq	ILMN_221221	ILMN_221221	TMEM107	NM_028336.2	NM_028336.2		66910	141802127	NM_028336.2	Tmem107	NP_082612.1	ILMN_2732649	001230296	S	1165	TCACATAGCGCTTCTAATTTGCCGCGTGTGAGGGGAGCATTCTGGGATGG	11	+	68886695-68886744	11qB3	Mus musculus transmembrane protein 107 (Tmem107), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-19I2.5; 2810049P21Rik; 1110004B13Rik	RP23-19I2.5; 2810049P21Rik; 1110004B13Rik
Mus musculus	MEEBO	ILMN_193923	ILMN_193923	IGKV4-91_AJ231229_IG_KAPPA_VARIABLE_4-91_29	IGKV4-91_AJ231229_Ig_kappa_variable_4-91_29						IGKV4-91_AJ231229_Ig_kappa_variable_4-91_29		ILMN_1239596	001170079	S	18	CAGTCATAGTGTCTAATGGAGAAATTGTGCTCACCCAGTCTCCAACCACC										
Mus musculus	Riken	ILMN_203156	ILMN_203156	6720453O12RIK	ri|6720453O12|PX00059O09|AK032794|4226					AK032794	6720453O12Rik		ILMN_2555157	001170408	S	4004	CTGCATGTCCCCACGAATGCTGCAAAGGGTTCCAATAGATTCCCAAGCAG										
Mus musculus	RefSeq	ILMN_223117	ILMN_255541	2410008K03RIK	NM_028022.1	NM_028022.1		71962	58037268	NM_028022.1	2410008K03Rik	NP_082298.1	ILMN_2759563	007040181	S	1427	TTCCTAGCCAGATGAGTTCAGCAGTGCACTCCCTTCGCGGGACTCCGAAG	11	+	4122291-4122340	11qA1	Mus musculus RIKEN cDNA 2410008K03 gene (2410008K03Rik), mRNA.				RP23-453B22.6	RP23-453B22.6
Mus musculus	Riken	ILMN_203446	ILMN_203446	E130215L21RIK	ri|E130215L21|PX00092P23|AK053708|2502					AK053708	E130215L21Rik		ILMN_1236330	004850475	S	1982	TCTTGGCTTGATGCAGATGTTGGAGCAGGAACTTGGAGGACGGCGGGTAC										
Mus musculus	Riken	ILMN_206532	ILMN_206532	STIM1	ri|D930039F22|PX00203D13|AK086594|2506					AK086594	Stim1		ILMN_2580803	007380703	S	2421	GCCCACCTGCAGGCTGATGTTATGGAGACAGTTTTCTCAATTGAGGTTCC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_195784	ILMN_195784	CRIM1	scl50488.17_56				51770404	XM_128751	Crim1		ILMN_2525274	005130270	S	4486	CGTGAGTGTATACATATGGAGCAACCAGCAGTTCACATGCTATGGAAAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195784	ILMN_195784	CRIM1	scl50488.17_56				51770404	XM_128751	Crim1		ILMN_1256087	000290273	S	1	GTGTTCTAGCTGTTTGCATCAAAGGAAAAAAAGATTTATTATCAAGGGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	RefSeq	ILMN_227532	ILMN_227532	EG547109	NM_001034906.1	NM_001034906.1		547109	85702269	NM_001034906.1	EG547109	NP_001030078.1	ILMN_2842783	004040747	S	1177	GGAGGTGGATTTGAAGGACCATGAGCAGTGGACTGTAGGAGTCCGTAAGG	9	+	88386053-88386102	9qE3.1	Mus musculus predicted gene, EG547109 (EG547109), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215521	ILMN_215521	BCL2A1D	scl0012047.1_125				6671629	NM_007536	Bcl2a1d		ILMN_2660555	007040202	S	533	CGGCGGAATGGAGGTTGGGAAGATGGCTTCATAAAGAAGTTTGAACCCAA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_199886	ILMN_199886	LOC381546	XM_355512.1	XM_355512.1			38078679	XM_355512.1	LOC381546		ILMN_1248921	006020240	S	1021	CTTCCACATCAGTTTCCAGTGCAGCATCCCAGGCACCGACCTGAAGGGTC										
Mus musculus	RefSeq	ILMN_240673	ILMN_240673	3300001G02RIK	NM_030093.1	NM_030093.1		78372	21313435	NM_030093.1	3300001G02Rik	NP_084369.1	ILMN_2990229	004180292	S	689	TGTCAGCGTGAGCCCTGGGACCCTCGGATTGTGGAAAATTCCTCTGCCCT	11	+	32108852-32108901	11qA4	Mus musculus RIKEN cDNA 3300001G02 gene (3300001G02Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C16ORF33; AL033324	C16ORF33; AL033324
Mus musculus	RefSeq	ILMN_200227	ILMN_200227	LOC386002	XM_359029.1	XM_359029.1			38081005	XM_359029.1	LOC386002		ILMN_1252687	002320280	S	911	TACAGACACTAAGAGAACACAAATGCCAGTCCAGGCTAATATACCCGGCC										
Mus musculus	Riken	ILMN_202177	ILMN_202177	1700034P14RIK	ri|1700034P14|ZX00074D03|AK006608|484					AK006608	1700034P14Rik		ILMN_2547610	006060411	S	170	GCGAGACTTGGCCCAGAACATTGCGGATCGGGTCGGCGCCATTTTGGGAC										
Mus musculus	RefSeq	ILMN_196875	ILMN_248285	KHDC1C	NM_001033904.1	NM_001033904.1		433278	76573871	NM_001033904.1	Khdc1c	NP_001029076.1	ILMN_1250515	001340091	S	308	GGATCCTTCAGAACACAGGAATGAGTGACCTCCGCAGGAAGGGATGGTGG	1	+	21358719-21358738:21358739-21358768	1qA4	Mus musculus KH domain containing 1C (Khdc1c), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC117514	MGC117514
Mus musculus	RefSeq	ILMN_248285	ILMN_248285	KHDC1C	NM_001033904.1	NM_001033904.1		433278	76573871	NM_001033904.1	Khdc1c	NP_001029076.1	ILMN_2835807	004730703	S	321	CACAGGAATGAGTGACCTCCGCAGGAAGGGATGGTGGAATGTGCCTGACT	1	+	21358732-21358738:21358739-21358781	1qA4	Mus musculus KH domain containing 1C (Khdc1c), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC117514	MGC117514
Mus musculus	RefSeq	ILMN_240073	ILMN_240073	4931408A02RIK	NM_027627.1	NM_027627.1		70967	110625808	NM_027627.1	4931408A02Rik	NP_081903.1	ILMN_2949877	002710093	S	797	CCCAAGAACATACTCACGGCAGTGGATCCGGCTGTTGCTAATCTAAATCC	16	+	90894825-90894874	16qC3.3	Mus musculus RIKEN cDNA 4931408A02 gene (4931408A02Rik), mRNA. XM_976357	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	1700092M14Rik; MGC117713	1700092M14Rik; MGC117713
Mus musculus	Riken	ILMN_205165	ILMN_205165	A630097K09RIK	ri|A630097K09|PX00148M15|AK042505|2126					AK042505	A630097K09Rik		ILMN_2570478	004060446	S	1836	CAGAGGTCGACCTTGAGTGTTGTTCCTCAGATGGCTGTCCAACTTGTGTG										
Mus musculus	RefSeq	ILMN_200314	ILMN_200314	LOC386205	XM_359118.1	XM_359118.1			38081288	XM_359118.1	LOC386205		ILMN_1219363	003460601	S	420	GGAAGAAACTGTCCAAGATCTGCAAAAAGAAATGGAACACCCATCAAAGG										
Mus musculus	RefSeq	ILMN_194910	ILMN_244463	2810453I06RIK	NM_026050.1	NM_026050.1		67238	21313057	NM_026050.1	2810453I06Rik	NP_080326.1	ILMN_1224076	006940114	S	1919	CTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGC	5	+	144325048-144325097	5qG2	Mus musculus RIKEN cDNA 2810453I06 gene (2810453I06Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AW047776; 1500026F15Rik; Sipar	AW047776; 1500026F15Rik; Sipar
Mus musculus	RefSeq	ILMN_194910	ILMN_244463	2810453I06RIK	NM_026050.1	NM_026050.1		67238	21313057	NM_026050.1	2810453I06Rik	NP_080326.1	ILMN_2695228	003370367	S	432	AGATTCTGGTCACTGGATCCTCTGGAGCTGGAGTTGCAGGCAGTTGTGAA	5	+	144312346-144312395	5qG2	Mus musculus RIKEN cDNA 2810453I06 gene (2810453I06Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AW047776; 1500026F15Rik; Sipar	AW047776; 1500026F15Rik; Sipar
Mus musculus	RefSeq	ILMN_217447	ILMN_217447	MCCC1	NM_023644.3	NM_023644.3		72039	142366519	NM_023644.3	Mccc1	NP_076133.2	ILMN_1215246	003130441	S	2316	CAGTCTCTAGATCTCGGAGAGAGGAGCTTTATTAAATCAATGATGGTGTG	3	-	35858805-35858854	3qB	Mus musculus methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) (Mccc1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [evidence IEA]; Catalysis of the reaction: ATP + 3-methylcrotonyl-CoA + HCO3- = ADP + phosphate + 3-methylglutaconyl-CoA [goid 4485] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MCCalpha; Mcca; 2310058B18Rik; 1810045E08Rik; R75106	MCCalpha; Mcca; 2310058B18Rik; 1810045E08Rik; R75106
Mus musculus	RefSeq	ILMN_239477	ILMN_239477	COX17	NM_001017429.2	NM_001017429.2		12856	83816953	NM_001017429.2	Cox17	NP_001017429.1	ILMN_3160517	006290392	S	65	TTGCGCGTGTGCGCTCATAGTTGCTTTCGCCTGGAAAGATGCCGGGACTG	16	+	38347149-38347186:38347187-38347198	16qB3	Mus musculus cytochrome c oxidase, subunit XVII assembly protein homolog (yeast) (Cox17), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IEA]	The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]	Increases the activity of an enzyme [goid 8047] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Assists in the delivery of copper ions to target proteins or compartments [goid 16531] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]	AI037035	AI037035
Mus musculus	RefSeq	ILMN_215414	ILMN_215414	PRPF40B	NM_018786.1	NM_018786.1		54614	9055243	NM_018786.1	Prpf40b	NP_061256.1	ILMN_2810331	002100563	S	2845	GCACCTCTCAAGGTTGCTTTTGGTGTTCAAGGGTCCCCTAGTTCTCAGAC	15	+	99144727-99144776	15qF1	Mus musculus PRP40 pre-mRNA processing factor 40 homolog B (yeast) (Prpf40b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2610317D23Rik; MGC91243; Hypc	2610317D23Rik; MGC91243; Hypc
Mus musculus	RefSeq	ILMN_215414	ILMN_215414	PRPF40B	NM_018786.1	NM_018786.1		54614	9055243	NM_018786.1	Prpf40b	NP_061256.1	ILMN_1249348	000670020	S	2942	CCACGGGGTGGGTGATGCCAGTAGATAGTGTGAGAAGGGGTCTCCAGGAA	15	+	99144824-99144873	15qF1	Mus musculus PRP40 pre-mRNA processing factor 40 homolog B (yeast) (Prpf40b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2610317D23Rik; MGC91243; Hypc	2610317D23Rik; MGC91243; Hypc
Mus musculus	RefSeq	ILMN_208879	ILMN_208879	SPOCK1	NM_009262.2	NM_009262.2		20745	50053937	NM_009262.2	Spock1	NP_033288.2	ILMN_2590421	007050477	S	3856	GTCTTCTGGAAGGACCCTTTCAGTCTAATCATCAGGCGAGCATATGAGAC	13	-	57528163-57528212	13qB1	Mus musculus sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1 (Spock1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Spock; Ticn1; testican	Spock; Ticn1; testican
Mus musculus	RefSeq	ILMN_235218	ILMN_235218	GM906	NM_001033438.1	NM_001033438.1		380882	85701948	NM_001033438.1	Gm906	NP_001028610.1	ILMN_2878742	005890440	S	2754	CACAAACTATAGCAGACCAGCAAGCAGGCGGAGCTGTGGCCATTCCACCT	13	-	50258026-50258075	13qA5	Mus musculus gene model 906, (NCBI) (Gm906), mRNA.					
Mus musculus	RefSeq	ILMN_209423	ILMN_209423	DNAJC16	NM_172338.2	NM_172338.2		214063	133892867	NM_172338.2	Dnajc16	NP_758841.1	ILMN_2595637	004290397	S	3793	CTTTGAACCAAGCACCTCGGATCCTGACTACTTTAAACACTGAGCTCCAG	4	-	141317983-141318032	4qE1	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 16 (Dnajc16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	mKIAA0962; 4732437J24Rik; D030060M24; 2900037O03Rik	mKIAA0962; 4732437J24Rik; D030060M24; 2900037O03Rik
Mus musculus	RefSeq	ILMN_209423	ILMN_209423	DNAJC16	NM_172338.2	NM_172338.2		214063	133892867	NM_172338.2	Dnajc16	NP_758841.1	ILMN_1247873	005270192	S	3832	CTGAGCTCCAGTGGTAAGTGAGAAATTATTTGAACCCAGGAACTCTGTAG	4	-	141317944-141317993	4qE1	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 16 (Dnajc16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	mKIAA0962; 4732437J24Rik; D030060M24; 2900037O03Rik	mKIAA0962; 4732437J24Rik; D030060M24; 2900037O03Rik
Mus musculus	Riken	ILMN_204743	ILMN_204743	B930067C07RIK	ri|B930067C07|PX00164B20|AK047460|2045					AK047460	B930067C07Rik		ILMN_1256362	001470066	S	1956	GAGCCAGGAATGGCGGTGTACATTAGAAATCCCAGTACTTTGGAGGCTGG										
Mus musculus	RefSeq	ILMN_216314	ILMN_216314	AQP1	NM_007472.2	NM_007472.2		11826	145966713	NM_007472.2	Aqp1	NP_031498.1	ILMN_2756486	001230612	S	2665	GAACCAGGACCTTGTATCTGTCTGCTCTGTGTATGTTTCTTTGCAATTGA				6qB3	Mus musculus aquaporin 1 (Aqp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]		
Mus musculus	MEEBO	ILMN_223190	ILMN_223190	1110001D15RIK	scl068553.2_30	XM_356184.1			38090074	XM_356184.1	1110001D15Rik		ILMN_2760531	004670014	S	4517	AGACATTGATCAGGAAACGCCAGCAAAAGGAAGACATTTGGGCCCCACCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219699	ILMN_219699	C1QTNF7	NM_175425.3	NM_175425.3		109323	61098163	NM_175425.3	C1qtnf7	NP_780634.2	ILMN_2980073	002850138	S	3584	CCAGGGCTTTATCCGTGCCAGGCTAACAATCTACCAGCTGAGTCACAGTC	5	+	44009797-44009846	5qB3	Mus musculus C1q and tumor necrosis factor related protein 7 (C1qtnf7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CTRP7; 5530401N20Rik; 8430425G24Rik	CTRP7; 5530401N20Rik; 8430425G24Rik
Mus musculus	RefSeq	ILMN_189041	ILMN_239409	ZNHIT3	NM_001005223.2	NM_001005223.2		448850	142385710	NM_001005223.2	Znhit3	NP_001005223.1	ILMN_2457827	004230451	S	222	CGTAGCTGATTTCCTCAACAGTGATGAGGAAGAAGACAGAGTGTCTCTGC	11	-	84726741-84726790	11qC	Mus musculus zinc finger, HIT type 3 (Znhit3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Myohd1; Trip3; MGC107312	Myohd1; Trip3; MGC107312
Mus musculus	RefSeq	ILMN_187423	ILMN_322436	2610014I16RIK	XM_001480001.1	XM_001480001.1		66300	149256503	XM_001480001.1	2610014I16Rik	XP_001480051.1	ILMN_1253189	001580754	S	1414	CATGACTGTGGCTTGGCCGTAGGCAGGCCTGGGATATACTCTGCTGGCCA	7	-	16857588-16857637	7qA2	PREDICTED: Mus musculus RIKEN cDNA 2610014I16 gene (2610014I16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_250372	ILMN_250372	FCGRT	NM_010189.1	NM_010189.1		14132	6753835	NM_010189.1	Fcgrt	NP_034319.1	ILMN_2917497	007050047	S	1019	ATGGCTTTCTCTCAGCGGCGATGACTCTGGTGACCTGTTGCCTGGTGGGA	7	-	44961340-44961389	7qB4	Mus musculus Fc receptor, IgG, alpha chain transporter (Fcgrt), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]	FcRn	FcRn
Mus musculus	RefSeq	ILMN_198319	ILMN_309902	LOC665047	XR_031092.1	XR_031092.1		665047	149269558	XR_031092.1	LOC665047		ILMN_1236793	000380403	S	634	TAACCGATGCTCTTCCTGAGCCTGATGCAGGAGCGATGGCTGCCCCGGAA				18qA1	PREDICTED: Mus musculus similar to neuroendocrine differentiation factor (LOC665047), misc RNA.					
Mus musculus	Riken	ILMN_205052	ILMN_205052	ATP7A	ri|C130071D07|PX00171M22|AK048541|2613					AK048541	Atp7a		ILMN_1252543	004010239	S	2539	TAGAGACAGCTTGCAGTTTCCTCTGCAATGTGGGAATCTCTTCCTGGCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISO]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The directed movement of copper ions out of a cell or organelle [goid 60003] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 2082] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The progression of a pyramidal neuron from its initial formation to its mature state [goid 21860] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; Any process that activates, maintains or increases the rate activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48554] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The chemical reactions and pathways involving epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine [goid 42414] [evidence IMP]; Any process that activates, maintains or increases the rate activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48554] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42421] [evidence IMP]; The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42415] [evidence IMP]; The chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid [goid 6568] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48553] [evidence IMP]; The modification of peptidyl-lysine [goid 18205] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The directed movement of copper ions into a cell or organelle [goid 15677] [evidence IMP]; Any process that activates, maintains or increases the rate activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48554] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; Any process that activates, maintains or increases the rate activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48554] [evidence IMP]; The chemical reactions and pathways resulting in the formation of elastin, a fibrous glycoprotein found in elastic tissues such as the walls of arteries [goid 51542] [evidence IMP]; Any process that activates, maintains or increases the rate activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48554] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process that reduce or remove the toxicity of copper ion. These include transport of copper away from sensitive areas and to compartments or complexes whose purpose is sequestration of copper ion [goid 10273] [evidence IMP]; The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites [goid 48812] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42428] [evidence IMP]; The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42421] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence IMP]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The directed movement of copper ions into a cell or organelle [goid 15677] [evidence IMP]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IMP]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IMP]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IDA]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways involving tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6570] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The process whereby a relatively unspecialized thymocyte acquires specialized features of a T-helper cell [goid 42093] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IGI]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A copper chaperone activity that specifically delivers copper to the Cu-Zn superoxide dismutase [goid 16532] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IMP]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [evidence IDA]		
Mus musculus	RefSeq	ILMN_241430	ILMN_241430	AMICA1	NM_001005421.3	NM_001005421.3		270152	142347555	NM_001005421.3	Amica1	NP_001005421.2	ILMN_3160218	003850692	S	1638	GGCTGGTGAGGATGGGGAGCAGCCTGGTCTGCCTTGTGCTTTCAAGCTTT	9	+	44915794-44915843	9qA5.2	Mus musculus adhesion molecule, interacts with CXADR antigen 1 (Amica1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm638; AMICA; Crea7; MGC61025	Gm638; AMICA; Crea7; MGC61025
Mus musculus	RefSeq	ILMN_220732	ILMN_225891	PLEKHG4	NM_001081333.1	NM_001081333.1		102075	124487488	NM_001081333.1	Plekhg4	NP_001074802.1	ILMN_2726005	000520719	S	3809	AGGGGAGTATTTCTAGACTGCAGGCTGGTAGAGTAGTGTGGAGCTCTCGG	8	+	107906404-107906453	8qD3	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 4 (Plekhg4), mRNA.				AI448583; 4931414L13Rik; mFLJ00068	AI448583; 4931414L13Rik; mFLJ00068
Mus musculus	RefSeq	ILMN_193898	ILMN_249105	CLIP4	NM_030179.2	NM_030179.2		78785	27754154	NM_030179.2	Clip4	NP_084455.2	ILMN_2606470	002480075	S	2138	CTGTGGGTGACAAGCGCTATTTCACCTGTAAGCCGAACTACGGAGTGCTG	17	+	72205774-72205823	17qE1.3	Mus musculus CAP-GLY domain containing linker protein family, member 4 (Clip4), mRNA.				Rsnl2; 1700024K14Rik; 5830409B12Rik; 4833417L20Rik; 1700074B05Rik	Rsnl2; 1700024K14Rik; 5830409B12Rik; 4833417L20Rik; 1700074B05Rik
Mus musculus	MEEBO	ILMN_223756	ILMN_223756	CTE1	scl026897.4_185	NM_012006.1			6753549	NM_012006.1	Cte1		ILMN_2768647	004920500	S	1366	TACATTTAAAAAAATTGATATAATTATCAAAATAGTGCTGATTCAAGGGC										
Mus musculus	RefSeq	ILMN_199502	ILMN_199502	LOC382630	XM_356598.1	XM_356598.1			38073627	XM_356598.1	LOC382630		ILMN_1219390	002340482	S	4485	GGCAACTAAGAATGCCAAGGATGGGACTGATTGTGGGGACATTGTGGAGC										
Mus musculus	RefSeq	ILMN_245416	ILMN_245416	FHL1	NM_001077362.1	NM_001077362.1		14199	116517335	NM_001077362.1	Fhl1	NP_001070830.1	ILMN_3117381	000010639	A	2059	TCGGAGGTGGTCGTCATCCTTCACAGGCAGGACTGGGTTTTCACCCCCTT	X	+	54046258-54046307	XqA5	Mus musculus four and a half LIM domains 1 (Fhl1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KyoT	KyoT
Mus musculus	RefSeq	ILMN_215269	ILMN_215269	SPRR2A	NM_011468.4	NM_011468.4		20755	85785857	NM_011468.4	Sprr2a	NP_035598.2	ILMN_3150677	005390259	A	2708	GGGCAAGATTCTAGCCAAGAGGATCAATGTGCGGATTGAGCACATCAAGC	3	+	92025574-92025623	3qF1	Mus musculus small proline-rich protein 2A (Sprr2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence TAS]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC117544	MGC117544
Mus musculus	RefSeq	ILMN_215269	ILMN_215269	SPRR2A	NM_011468.4	NM_011468.4		20755	85785857	NM_011468.4	Sprr2a	NP_035598.2	ILMN_3071908	000060326	I	3333	GAGGAAAGGGCTAAAGGGGACAGATTATCAGCGGTGAACTGCCAGGAGGG	3	+	92026199-92026248	3qF1	Mus musculus small proline-rich protein 2A (Sprr2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence TAS]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC117544	MGC117544
Mus musculus	RefSeq	ILMN_222565	ILMN_222565	SLAIN1	NM_198014.2	NM_198014.2		105439	51491881	NM_198014.2	Slain1	NP_932131.2	ILMN_2751572	000160630	S	1867	CCCTTGAAGAATGGGAAGAAGTGAAAATGAGGGTGTGTTACCTAGCTGGC	14	+	104103143-104103192	14qE2.3	Mus musculus SLAIN motif family, member 1 (Slain1), mRNA.				9630044O09Rik; AA675320; AW742596	9630044O09Rik; AA675320; AW742596
Mus musculus	Riken	ILMN_206379	ILMN_206379	6720406L13RIK	ri|6720406L13|PX00059C07|AK078395|1549					AK078395	6720406L13Rik		ILMN_1230215	004610348	S	1301	GATGGTCAGAACTGGCCCATTCCAAGCTCTGATGTGACTGCCAAACTGAC										
Mus musculus	MEEBO	ILMN_185980	ILMN_185980	UBE2L6	scl0003139.1_11				9910601	NM_019949	Ube2l6		ILMN_2431619	002650754	S	19	CTGCTGGAATCTGCTGGTGCCCCACGCTCCAACCCGAGATGATGGCCAGC							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent modification of the target protein [goid 19941] [evidence IDA]; The covalent addition to a protein of ISG15, a ubiquitin-like protein [goid 32020] [evidence IDA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IDA]; Catalysis of the covalent attachment of the ubiquitin-like protein ISG15 to other proteins [goid 42296] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]		
Mus musculus	RefSeq	ILMN_243795	ILMN_243795	LOC218963	NR_002856.1	NR_002856.1		218963	84872148	NR_002856.1	LOC218963		ILMN_3092125	002470598	A	343	GGCTATTAATTATTCGGTCTGCATTCCCAGTGGGCAGTGATGGCATTACT	14	+	46704272-46704321	14qC1	Mus musculus ubiquitin pseudogene (LOC218963), non-coding RNA.					
Mus musculus	RefSeq	ILMN_234273	ILMN_234273	2310009E04RIK	NM_029347.1	NM_029347.1		75578	58037420	NM_029347.1	2310009E04Rik	NP_083623.1	ILMN_2999158	006660133	S	1693	TTCTTGATCCTTACTGTGTGTATGACGCTCACTCATTGGATCCAGGAGCG	4	+	95488125-95488174	4qC5	Mus musculus RIKEN cDNA 2310009E04 gene (2310009E04Rik), mRNA.				RP23-472I13.1	RP23-472I13.1
Mus musculus	RefSeq	ILMN_224258	ILMN_241698	PNPLA3	NM_054088.3	NM_054088.3		116939	144226244	NM_054088.3	Pnpla3	NP_473429.2	ILMN_2777462	002710193	S	4453	GCCCCTTAGCAAGGCTGGTTCATTTGTTTATTAAAAGCAGGTGTGGGTGA	15	+	84019755-84019804	15qE2	Mus musculus patatin-like phospholipase domain containing 3 (Pnpla3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Adpn	Adpn
Mus musculus	RefSeq	ILMN_200072	ILMN_200072	LOC385689	XM_358913.1	XM_358913.1			38080216	XM_358913.1	LOC385689		ILMN_1251602	005670204	S	262	CAGGAAAACATAACCAAACAGCTCCAGAGATTACCAGATGGTGAAAGGCG										
Mus musculus	RefSeq	ILMN_212787	ILMN_212787	JUB	NM_010590.4	NM_010590.4		16475	146134474	NM_010590.4	Jub	NP_034720.2	ILMN_2630319	003870576	S	1206	AAAGGTATCTATGGGCAGAGCAATGCCTGCCAGGCCCTGGACAGCCTCTA				14qC3	Mus musculus ajuba (Jub), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IMP]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IMP]; The migration of epithelial cells along or through a wound gap to reestablish a continuous epithelium [goid 35313] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_192651	ILMN_238232	PKIB	NM_001039053.1	NM_001039053.1		18768	84794588	NM_001039053.1	Pkib	NP_001034142.1	ILMN_2490076	005700025	S	1234	GCTCCCTGCACTATGAATGATCTAACTAGGGTTTTACTGTGGCAGATGAG	10	+	57428839-57428888	10qB4	Mus musculus protein kinase inhibitor beta, cAMP dependent, testis specific (Pkib), transcript variant 5, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IEA]	Prkacn2; PKIbeta	Prkacn2; PKIbeta
Mus musculus	RefSeq	ILMN_221079	ILMN_247005	GPS2	NM_019726.3	NM_019726.3		56310	118130652	NM_019726.3	Gps2	NP_062700.2	ILMN_2730784	003400349	S	1109	AACCCAAGATTCTATCACAAGTAACCACCAGAGAGCTCCAGCCCACCCTC	11	+	69728828-69728877	11qB3	Mus musculus G protein pathway suppressor 2 (Gps2), mRNA.				AI505953	AI505953
Mus musculus	RefSeq	ILMN_213439	ILMN_213439	1110019N10RIK	NM_026753.1	NM_026753.1		68523	21312045	NM_026753.1	1110019N10Rik	NP_081029.1	ILMN_2849359	001980274	S	204	GACCCGGAGCATCCACTGACACTGGAGGAATTGAACGTAGTAGAGCAAGT	8	-	107530446-107530495	8qD3	Mus musculus RIKEN cDNA 1110019N10 gene (1110019N10Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_205322	ILMN_205322	9830169E20RIK	ri|9830169E20|PX00119N12|AK036745|2602					AK036745	9830169E20Rik		ILMN_2571683	005270592	S	1759	ATAGCCGCTTTCTGTGCCTTACAAACCAGCGTGCCTCATGGCCGTACACC										
Mus musculus	RefSeq	ILMN_237217	ILMN_237217	KRTDAP	NM_001033131.1	NM_001033131.1		64661	84781693	NM_001033131.1	Krtdap	NP_001028303.1	ILMN_2868152	000830333	S	358	AGGCTGAGCCCAGTAGAAGAGGAGGCAAGCATGGAATCTGAAGTCCATCC	7	+	30499745-30499794	7qB1	Mus musculus keratinocyte differentiation associated protein (Krtdap), mRNA. XM_923930 XM_923934	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence ISO]		Kdap; sk221	Kdap; sk221
Mus musculus	Riken	ILMN_203760	ILMN_203760	PRKCQ	ri|A130035A12|PX00122H12|AK037664|2292					AK037664	Prkcq		ILMN_1225210	002480019	S	2102	AACCTCGACAGAAGGGGAAGGTGGAAGCATTGTCAGCACCCCCCACAACC						An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222032	ILMN_222032	SETD5	NM_028385.1	NM_028385.1		72895	31742487	NM_028385.1	Setd5	NP_082661.1	ILMN_2743650	005290148	S	6077	CTGTTGTTTTCCCCACAAACCCATCAGTCTGGGAGAGCATTGGGAGTGGA	6	+	113103025-113103074	6qE3	Mus musculus SET domain containing 5 (Setd5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			mKIAA1757; 2900045N06Rik; C330007C20; MGC90828; FLJ10707; C85544	mKIAA1757; 2900045N06Rik; C330007C20; MGC90828; FLJ10707; C85544
Mus musculus	RefSeq	ILMN_222288	ILMN_222288	5730410E15RIK	NM_178765.3	NM_178765.3		319613	74096430	NM_178765.3	5730410E15Rik	NP_848880.2	ILMN_3130719	002030367	A	2661	GCCCCTGCCGTGTTGTCTGAGGTGCCCGTTCTTATACTAATGGTTCAGGA	15	-	44503818-44503867	15qB3.2	Mus musculus RIKEN cDNA 5730410E15 gene (5730410E15Rik), transcript variant c, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			KIAA1472; A830027B17Rik; Sybu; mKIAA1472; Golsyn	KIAA1472; A830027B17Rik; Sybu; mKIAA1472; Golsyn
Mus musculus	MEEBO	ILMN_217321	ILMN_217321	C030007I09RIK	scl22595.1.190_2	NM_175416.2			31341829	NM_175416.2	C030007I09Rik		ILMN_2681859	004730504	S	2275	ATAACATATTTAGGCTTGTTCTAAATGACAGGGAAATGTTTTAACAGATA										
Mus musculus	RefSeq	ILMN_231253	ILMN_231253	EG546038	NM_001034905.2	NM_001034905.2		546038	142360037	NM_001034905.2	EG546038	NP_001030077.1	ILMN_3162604	005080239	I	1568	AGAGCCTAAACAGAGGAAGGCATCTCTATCCATGTCCAGCCACCTAAGCC	8	+	19142838-19142887	8qA1.3	Mus musculus predicted gene, EG546038 (EG546038), transcript variant h, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Ep2c/h; Spag11c/h	Ep2c/h; Spag11c/h
Mus musculus	RefSeq	ILMN_196666	ILMN_196666	C130010K08RIK	XM_284192.1	XM_284192.1			28523345	XM_284192.1	C130010K08Rik		ILMN_2525296	000380619	S	1962	GTACAGAATTAGGGCTTGTGAAGGAGAACGACTCAGCCATCCGTGAATGG										
Mus musculus	RefSeq	ILMN_210498	ILMN_210498	MINPP1	NM_010799.1	NM_010799.1		17330	6754697	NM_010799.1	Minpp1	NP_034929.1	ILMN_2617971	003310731	S	1109	CTGAAACAGTACTGGAAACGAAGCTATGGCTACACCATTAACAGCCGGTC	19	+	32572895-32572944	19qC1	Mus musculus multiple inositol polyphosphate histidine phosphatase 1 (Minpp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = myo-inositol pentakisphosphate (mixed isomers) + phosphate [goid 4446] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	AA408516	AA408516
Mus musculus	RefSeq	ILMN_210498	ILMN_210498	MINPP1	NM_010799.1	NM_010799.1		17330	6754697	NM_010799.1	Minpp1	NP_034929.1	ILMN_1237235	006620433	S	27	ACACTCGCTCGGTGACAGCACCGGAGACCACGCTTGCCTTCTGAGGTTCC	19	+	32560285-32560334	19qC1	Mus musculus multiple inositol polyphosphate histidine phosphatase 1 (Minpp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = myo-inositol pentakisphosphate (mixed isomers) + phosphate [goid 4446] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	AA408516	AA408516
Mus musculus	RefSeq	ILMN_210498	ILMN_210498	MINPP1	NM_010799.1	NM_010799.1		17330	6754697	NM_010799.1	Minpp1	NP_034929.1	ILMN_2703702	006280349	S	27	CACTCGCTCGGTGACAGCACCGGAGACCACGCTTGCCTTCTGAGGTTCCC	19	+	32560285-32560334	19qC1	Mus musculus multiple inositol polyphosphate histidine phosphatase 1 (Minpp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = myo-inositol pentakisphosphate (mixed isomers) + phosphate [goid 4446] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	AA408516	AA408516
Mus musculus	RefSeq	ILMN_210498	ILMN_210498	MINPP1	NM_010799.1	NM_010799.1		17330	6754697	NM_010799.1	Minpp1	NP_034929.1	ILMN_1253545	006860139	S	2252	ACGCTGTCAATAATTGTCTTTAACCTCCAAGTAGGTCTTGCAGAATCGTC	19	+	32589493-32589542	19qC1	Mus musculus multiple inositol polyphosphate histidine phosphatase 1 (Minpp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = myo-inositol pentakisphosphate (mixed isomers) + phosphate [goid 4446] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	AA408516	AA408516
Mus musculus	RefSeq	ILMN_210498	ILMN_210498	MINPP1	NM_010799.1	NM_010799.1		17330	6754697	NM_010799.1	Minpp1	NP_034929.1	ILMN_2703704	000290451	S	38	TGACAGCACCGGAGACCACGCTTGCCTTCTGAGGTTCCCGGGCCGGAAGT	19	+	32560296-32560345	19qC1	Mus musculus multiple inositol polyphosphate histidine phosphatase 1 (Minpp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = myo-inositol pentakisphosphate (mixed isomers) + phosphate [goid 4446] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	AA408516	AA408516
Mus musculus	RefSeq	ILMN_210498	ILMN_210498	MINPP1	NM_010799.1	NM_010799.1		17330	6754697	NM_010799.1	Minpp1	NP_034929.1	ILMN_2733651	000580561	S	204	CCTCGGTAGCGCCCGCCGCGGTCCTGGCTGCGGCGCTGCTCTCGTCGTTC	19	+	32560462-32560511	19qC1	Mus musculus multiple inositol polyphosphate histidine phosphatase 1 (Minpp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = myo-inositol pentakisphosphate (mixed isomers) + phosphate [goid 4446] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	AA408516	AA408516
Mus musculus	RefSeq	ILMN_251661	ILMN_251661	PFDN4	NM_001013369.1	NM_001013369.1		109054	61656177	NM_001013369.1	Pfdn4	NP_001013387.1	ILMN_3109989	002690377	A	441	TTGATGCCTTAGAGTCCAGAGTGGCGTCCATCCAGCGGGTGTTAGCCGAC	2	+	170344192-170344241	2qH3	Mus musculus prefoldin 4 (Pfdn4), transcript variant 2, mRNA.				0610025M10Rik; C1; 1810063B06Rik; PFD4; C-1	0610025M10Rik; C1; 1810063B06Rik; PFD4; C-1
Mus musculus	RefSeq	ILMN_251661	ILMN_251661	PFDN4	NM_001013369.1	NM_001013369.1		109054	61656177	NM_001013369.1	Pfdn4	NP_001013387.1	ILMN_3036114	001190343	I	24	CTGCCACCCCGACCGGAAGGAATAGGGAACAGGGGACAATAGGTGATTAG	2	+	170321951-170322000	2qH3	Mus musculus prefoldin 4 (Pfdn4), transcript variant 2, mRNA.				0610025M10Rik; C1; 1810063B06Rik; PFD4; C-1	0610025M10Rik; C1; 1810063B06Rik; PFD4; C-1
Mus musculus	RefSeq	ILMN_217751	ILMN_217751	SLC6A1	NM_178703.2	NM_178703.2		232333	31341221	NM_178703.2	Slc6a1	NP_848818.1	ILMN_2905589	005560685	S	2720	GTCACCATCCCAGGACTTTCCCCAAGTGGGAGCTGTGGTCCTTCTGAGCT	6	+	114281684-114281733	6qE3	Mus musculus solute carrier family 6 (neurotransmitter transporter, GABA), member 1 (Slc6a1), mRNA. XM_976103	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + Na+(out) = gamma-aminobutyric acid(in) + Na+(in) [goid 5332] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	GABATR; Gabt; Gat1; Xtrp1; GABATHG; A730043E01; Gabt1; XT-1	GABATR; Gabt; Gat1; Xtrp1; GABATHG; A730043E01; Gabt1; XT-1
Mus musculus	RefSeq	ILMN_187220	ILMN_187220	TNFRSF23	NM_024290.3	NM_024290.3		79201	84875522	NM_024290.3	Tnfrsf23	NP_077252.2	ILMN_1221454	001170112	S	510	GGCTGTTCCTACTGATGCTAATTGTCTTCTGTATCTGAAGAAGATAAAGG	7	-	150860914-150860963	7qF5	Mus musculus tumor necrosis factor receptor superfamily, member 23 (Tnfrsf23), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mSOB; Tnfrh1; Tnfrsf1al1; Dctrailr1; MGC123882; mDcTrailr1; MGC123883	mSOB; Tnfrh1; Tnfrsf1al1; Dctrailr1; MGC123882; mDcTrailr1; MGC123883
Mus musculus	MEEBO	ILMN_185059	ILMN_185059	WNT6	scl0022420.2_231	NM_009526.2			34328157	NM_009526.2	Wnt6		ILMN_2423835	001990414	S	16	GGAGATCACTCCCCTTGGCCCCCCAGATGGAAATAAGAAAGCCAGACTCT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	Riken	ILMN_207148	ILMN_207148	F730011C10RIK	ri|F730011C10|PL00003G07|AK089343|2869					AK089343	F730011C10Rik		ILMN_1225190	002900630	S	2529	GATCAATGCTGTTTAACTGACTTCCATAGGCCCACTTCCCTTGGTGCCAG										
Mus musculus	RefSeq	ILMN_215265	ILMN_215265	CNNM1	NM_031396.1	NM_031396.1		83674	13878234	NM_031396.1	Cnnm1	NP_113573.1	ILMN_3001341	006590703	S	2607	CACAGCCTGGGGAAGGGCAGTTCGGCTGCAGTGAAGAAAGAGAGAGGAAG	19	+	43570045-43570094	19qC3	Mus musculus cyclin M1 (Cnnm1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CLP-1; Acdp1; AI846314	CLP-1; Acdp1; AI846314
Mus musculus	RefSeq	ILMN_215265	ILMN_215265	CNNM1	NM_031396.1	NM_031396.1		83674	13878234	NM_031396.1	Cnnm1	NP_113573.1	ILMN_2657394	005050246	S	1828	CCCCAAGAAGAGATGCCCAACTTTGAGGAGCACAGGTCACAGCAAGTCTC	19	+	43566323-43566372	19qC3	Mus musculus cyclin M1 (Cnnm1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CLP-1; Acdp1; AI846314	CLP-1; Acdp1; AI846314
Mus musculus	Riken	ILMN_203360	ILMN_203360	4631409B15RIK	ri|4631409B15|PX00102K17|AK028451|2457					AK028451	4631409B15Rik		ILMN_1257283	002630397	S	2230	TGGATTAAAAACTATCGGGGCTTTTGCTTGCCTCCCTGCAGGAAAGGGCC										
Mus musculus	RefSeq	ILMN_195518	ILMN_221571	SOS1	NM_009231.2	NM_009231.2		20662	117414169	NM_009231.2	Sos1	NP_033257.2	ILMN_2516283	001580326	S	8119	CCAGTATGACCCACCTTTAGCTAACTTGCTTTGTAACTTTTCAGCAACTG	17	-	80793842-80793891	17qE3	Mus musculus Son of sevenless homolog 1 (Drosophila) (Sos1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [evidence IMP]	9630010N06; AI449023	9630010N06; AI449023
Mus musculus	RefSeq	ILMN_221571	ILMN_221571	SOS1	NM_009231.2	NM_009231.2		20662	117414169	NM_009231.2	Sos1	NP_033257.2	ILMN_2737338	003940255	S	5115	CCCACCCCCACTCACAAACAAAATGTGGTGGTGTTGCCTTTAAACAAAAA	17	-	80796846-80796895	17qE3	Mus musculus Son of sevenless homolog 1 (Drosophila) (Sos1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [evidence IMP]	9630010N06; AI449023	9630010N06; AI449023
Mus musculus	RefSeq	ILMN_195083	ILMN_195083	ZFP395	NM_199029.1	NM_199029.1		380912	39841058	NM_199029.1	Zfp395	NP_950194.1	ILMN_2512442	006580338	S	931	TTGACCAAGGGTATTCTGCAGCGAACCGGAGACCAAAGAGTTACCCCTAC	14	+	66015414-66015463	14qD1	Mus musculus zinc finger protein 395 (Zfp395), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]	BC053701; Gm910; MGC60757	BC053701; Gm910; MGC60757
Mus musculus	RefSeq	ILMN_222481	ILMN_222481	RYBP	NM_019743.3	NM_019743.3		56353	133893368	NM_019743.3	Rybp	NP_062717.2	ILMN_1212848	005090280	S	3485	GGCTTGCAAGTTTCCCGTGCGTTTAGTACATGATCTTTCACACTCGTGTG	6	-	100179400-100179449	6qD3	Mus musculus RING1 and YY1 binding protein (Rybp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	2410018J24Rik; YEAF1; MGC62213	2410018J24Rik; YEAF1; MGC62213
Mus musculus	RefSeq	ILMN_215216	ILMN_215216	TMEM53	NM_026837.2	NM_026837.2		68777	142345624	NM_026837.2	Tmem53	NP_081113.1	ILMN_2734564	000990239	S	189	TGGTGATTCTCTTGGGCTGGGGAGGCTGCAGGGACAAGAACCTGGCCAAG	4	+	116938507-116938556	4qD1	Mus musculus transmembrane protein 53 (Tmem53), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110038M16Rik; 1500001P22Rik; 1700012A05Rik	1110038M16Rik; 1500001P22Rik; 1700012A05Rik
Mus musculus	RefSeq	ILMN_215216	ILMN_215216	TMEM53	NM_026837.2	NM_026837.2		68777	142345624	NM_026837.2	Tmem53	NP_081113.1	ILMN_2656884	000780195	S	463	GACCCACCAGCGCTTCCGCCATTTGCATGTGGTGGGCACCATCTTTGACA	4	+	116940695-116940744	4qD1	Mus musculus transmembrane protein 53 (Tmem53), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110038M16Rik; 1500001P22Rik; 1700012A05Rik	1110038M16Rik; 1500001P22Rik; 1700012A05Rik
Mus musculus	Riken	ILMN_204012	ILMN_204012	MADH1	ri|9830147J19|PX00118J13|AK036665|3837					AK036665	Madh1		ILMN_1240219	001570278	S	3709	CCATCGGGGCATCACCAGTGAGAGGCAGACAAGGAGCATGTGCTAGGGAA										
Mus musculus	RefSeq	ILMN_236809	ILMN_236809	PUF60	NM_028364.1	NM_028364.1		67959	76677816	NM_028364.1	Puf60	NP_082640.1	ILMN_3157649	006650086	A	1646	CCCTCAATGGGCGCTGGTTTGGTGGTCGCAAGGTGGTGGCTGAAGTGTAT	15	-	75900796-75900845	15qD3	Mus musculus poly-U binding splicing factor 60 (Puf60), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	SIAHBP1; 2810454F19Rik; 2410104I19Rik	SIAHBP1; 2810454F19Rik; 2410104I19Rik
Mus musculus	RefSeq	ILMN_209346	ILMN_230152	CYP2B10	NM_009999.3	NM_009999.3		13088	118129803	NM_009999.3	Cyp2b10	NP_034129.1	ILMN_2594926	002100608	S	1551	GAGCCTCTGAGAGACCTGCTGGAAATCAGTACTCCTATTGCATGTCTCCA	7	+	26711322-26711371	7qA3	Mus musculus cytochrome P450, family 2, subfamily b, polypeptide 10 (Cyp2b10), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	p16; Cyp2b20; Cyp2b	p16; Cyp2b20; Cyp2b
Mus musculus	RefSeq	ILMN_213310	ILMN_230152	CYP2B10	NM_009999.3	NM_009999.3		13088	118129803	NM_009999.3	Cyp2b10	NP_034129.1	ILMN_1215955	004120184	S	71	TACTCTTAGCCAGGGGACACCCAAAGTCCCGTGGCAACTTCCCACCAGGA	7	+	26682753-26682802	7qA3	Mus musculus cytochrome P450, family 2, subfamily b, polypeptide 10 (Cyp2b10), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	p16; Cyp2b20; Cyp2b	p16; Cyp2b20; Cyp2b
Mus musculus	RefSeq	ILMN_211712	ILMN_211712	COPS6	NM_012002.3	NM_012002.3		26893	146134430	NM_012002.3	Cops6	NP_036132.1	ILMN_2618793	004200142	S	765	GAGATCCTGCGGGAGGCCTATGCCCTATGTCACTGTCTTCCAGTTCTCAG				5qG2	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana) (Cops6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sgn3; VIP/MOV34	Sgn3; VIP/MOV34
Mus musculus	RefSeq	ILMN_210946	ILMN_210946	ATP6V0D2	NM_175406.2	NM_175406.2		242341	142366331	NM_175406.2	Atp6v0d2	NP_780615.1	ILMN_2610885	002710725	S	1896	ATTTTTCTTAAATATAGTCTATGCTTGCTCTGCTTCACAAATTAAATCTG	4	-	19804542-19804591	4qA3	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit D2 (Atp6v0d2), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	AI324824; V-ATPase; 1620401A02Rik	AI324824; V-ATPase; 1620401A02Rik
Mus musculus	RefSeq	ILMN_220747	ILMN_220747	TLR1	NM_030682.1	NM_030682.1		21897	13507602	NM_030682.1	Tlr1	NP_109607.1	ILMN_1236908	006940719	S	2390	CCATCCCTACCAATTACCACAAGCTCAAAACTCTCATGTCACGAAGGACC	5	-	65316200-65316249	5qC3.1	Mus musculus toll-like receptor 1 (Tlr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis [goid 45335] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The series of events in which a triacylated bacterial lipoprotein stimulus is received by a cell and converted into a molecular signal. Triacylated bacterial lipoproteins are triacylated lipoproteins characterized by the presence of conserved sequence motifs called pathogen-associated molecular patterns (PAMPs) [goid 42495] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence IMP]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence NAS]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence NAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence NAS]; Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a three acyl groups [goid 42497] [evidence NAS]		
Mus musculus	RefSeq	ILMN_209462	ILMN_230418	GHRHR	NM_001003685.1	NM_001003685.1		14602	51100961	NM_001003685.1	Ghrhr	NP_001003685.1	ILMN_2657702	005080750	S	665	GACCAACTTCAGCTGGCTGTTGGCAGAAGCTGTCTACCTGAGCTGCCTGT	6	+	55333306-55333355	6qB3	Mus musculus growth hormone releasing hormone receptor (Ghrhr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IMP]; Any process that modulates the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43567] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence ISO]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of any steroid hormone receptor signaling pathway [goid 33143] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of water within an organism or cell [goid 30104] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60124] [evidence IMP]; The process whose specific outcome is the progression of a somatotropin secreting cell over time, from its formation to the mature structure. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin [goid 60133] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 4999] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [evidence IMP]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [evidence IGI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Ghrfr; little; lit	Ghrfr; little; lit
Mus musculus	RefSeq	ILMN_209462	ILMN_230418	GHRHR	NM_001003685.1	NM_001003685.1		14602	51100961	NM_001003685.1	Ghrhr	NP_001003685.1	ILMN_2596001	007210170	S	1192	AATGGTATGGCCACGACCCTGAACTTCTGCCAGCTCGACGGACCTGCACT	6	+	55338185-55338234	6qB3	Mus musculus growth hormone releasing hormone receptor (Ghrhr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IMP]; Any process that modulates the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43567] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence ISO]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of any steroid hormone receptor signaling pathway [goid 33143] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of water within an organism or cell [goid 30104] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60124] [evidence IMP]; The process whose specific outcome is the progression of a somatotropin secreting cell over time, from its formation to the mature structure. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin [goid 60133] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 4999] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [evidence IMP]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [evidence IGI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Ghrfr; little; lit	Ghrfr; little; lit
Mus musculus	RefSeq	ILMN_195313	ILMN_195313	IKZF2	NM_011770.3	NM_011770.3		22779	142371007	NM_011770.3	Ikzf2	NP_035900.2	ILMN_1217123	004560541	S	2773	CAGTGTTCTGTCCACAGTCCATTCCTCTTTGACTCTTGGAATAGAAGGTC	1	-	69584243-69584292	1qC3	Mus musculus IKAROS family zinc finger 2 (Ikzf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfpn1a2; Helios; Znfn1a2	Zfpn1a2; Helios; Znfn1a2
Mus musculus	RefSeq	ILMN_212875	ILMN_211104	AA408296	NM_145415.2	NM_145415.2		215193	56790941	NM_145415.2	AA408296	NP_663390.2	ILMN_1218955	001400634	S	5283	GCTCATTTCCAGTGAGCCTCTTTTTCTCCCAGGCAATTATTCTGACTTCC	1	-	194930812-194930861	1qH6	Mus musculus expressed sequence AA408296 (AA408296), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Def; AW045375	Def; AW045375
Mus musculus	RefSeq	ILMN_212875	ILMN_211104	AA408296	NM_145415.2	NM_145415.2		215193	56790941	NM_145415.2	AA408296	NP_663390.2	ILMN_2631230	004150356	S	4931	GGCCCTGTACCTCTGACCACAGTGTTCTTATTCCTGTGGGGCTTGGGATC	1	-	194931164-194931213	1qH6	Mus musculus expressed sequence AA408296 (AA408296), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Def; AW045375	Def; AW045375
Mus musculus	RefSeq	ILMN_211104	ILMN_211104	AA408296	NM_145415.2	NM_145415.2		215193	56790941	NM_145415.2	AA408296	NP_663390.2	ILMN_2612564	001450452	S	2077	AGTCTGGGATCTCCAGGGCTCGACACTTCTTTCTGCAAGGAGAGAAGCAG	1	-	194939988-194940037	1qH6	Mus musculus expressed sequence AA408296 (AA408296), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Def; AW045375	Def; AW045375
Mus musculus	RefSeq	ILMN_211104	ILMN_211104	AA408296	NM_145415.2	NM_145415.2		215193	56790941	NM_145415.2	AA408296	NP_663390.2	ILMN_2738031	004920746	S	2434	TTGGACCTCATAGACCTGATCTGTTCACTGCCCCAGGAACGGGCTCCAGG	1	-	194933661-194933710	1qH6	Mus musculus expressed sequence AA408296 (AA408296), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Def; AW045375	Def; AW045375
Mus musculus	RefSeq	ILMN_189187	ILMN_315936	LOC100044565	XM_001472596.1	XM_001472596.1		100044565	149274931	XM_001472596.1	LOC100044565	XP_001472646.1	ILMN_2522155	000270538	S	289	CAGTGCAGCCTTCAGCCTCCCTCCCAGACCATCTCCAATGCCCCAGTCTC					PREDICTED: Mus musculus similar to tweety homolog 2 (LOC100044565), mRNA.					
Mus musculus	RefSeq	ILMN_199414	ILMN_199414	OLFR1487	NM_146636.1	NM_146636.1		258629	33239127	NM_146636.1	Olfr1487	NP_666847.1	ILMN_3004676	006510368	S	774	CTTACAGCCCAGCTCCAATCACTCCATGGATACTGACAAGATGGCATCTG	19	+	13694427-13694476	19qA	Mus musculus olfactory receptor 1487 (Olfr1487), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR202-18	MOR202-18
Mus musculus	RefSeq	ILMN_199414	ILMN_199414	OLFR1487	NM_146636.1	NM_146636.1		258629	33239127	NM_146636.1	Olfr1487	NP_666847.1	ILMN_2717136	006580521	S	319	GCTACTGTTGAAAGTTTCATGCTGGCCTCAATGGCCTATGACCGTCATGC	19	+	13693972-13694021	19qA	Mus musculus olfactory receptor 1487 (Olfr1487), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR202-18	MOR202-18
Mus musculus	RefSeq	ILMN_190619	ILMN_251120	UBE2L3	NM_009456.2	NM_009456.2		22195	133892277	NM_009456.2	Ube2l3	NP_033482.1	ILMN_2471793	002140563	S	2527	GCTCTTCCCACAATGGCAGAGAATAGGCTTTCTAAGATGCTGTGACCCCA	16	-	17152140-17152189	16qA3	Mus musculus ubiquitin-conjugating enzyme E2L 3 (Ube2l3), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	Ubce7; MGC118100; UbcM4; C79827	Ubce7; MGC118100; UbcM4; C79827
Mus musculus	RefSeq	ILMN_190619	ILMN_251120	UBE2L3	NM_009456.2	NM_009456.2		22195	133892277	NM_009456.2	Ube2l3	NP_033482.1	ILMN_2475727	002360470	S	2503	CTTGAAGTGCCCGGGTCTCGTCCTGCTCTTCCCACAATGGCAGAGAATAG	16	-	17152164-17152213	16qA3	Mus musculus ubiquitin-conjugating enzyme E2L 3 (Ube2l3), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	Ubce7; MGC118100; UbcM4; C79827	Ubce7; MGC118100; UbcM4; C79827
Mus musculus	RefSeq	ILMN_256042	ILMN_256042	DHTKD1	NM_001081131.1	NM_001081131.1		209692	124487484	NM_001081131.1	Dhtkd1	NP_001074600.1	ILMN_3101289	005260056	A	2780	AGGCTCCGTCTTGTAAGCCGACCCCCTTTGCCAGCACCTGCGGTAGGAAT	2	-	5819811-5819858:5820957-5820958	2qA1	Mus musculus dehydrogenase E1 and transketolase domain containing 1 (Dhtkd1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2-oxoglutarate + lipoamide = S-succinyldihydrolipoamide + CO2 [goid 4591] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]	C330018I04Rik	C330018I04Rik
Mus musculus	RefSeq	ILMN_196630	ILMN_256042	DHTKD1	NM_001081131.1	NM_001081131.1		209692	124487484	NM_001081131.1	Dhtkd1	NP_001074600.1	ILMN_1258696	001740086	S	4575	CTCTCACAAGTTTATTATTTCTTGTTACAGTTTTCCCTGACAGAGCTATG	2	-	5817500-5817549	2qA1	Mus musculus dehydrogenase E1 and transketolase domain containing 1 (Dhtkd1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2-oxoglutarate + lipoamide = S-succinyldihydrolipoamide + CO2 [goid 4591] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]	C330018I04Rik	C330018I04Rik
Mus musculus	MEEBO	ILMN_210334	ILMN_210334	SSFA1	scl0020826.2_255	NM_011482.2			24475934	NM_011482.2	Ssfa1		ILMN_1215677	005720379	S	497	GCCACCCTGTTGTGTACATATTGCTGTTAGCATGTACTATTTCAACCAGT										
Mus musculus	MEEBO	ILMN_184478	ILMN_184478	5930418K15RIK	scl0077106.1_295						5930418K15Rik		ILMN_2418957	000380246	S	2	TCCAGAAGGAACACCGTTTGACCATCAGTGCACCAGTGTTGTCTGAGCAG										
Mus musculus	Riken	ILMN_205729	ILMN_205729	9930015A14RIK	ri|9930015A14|PX00119P01|AK036820|3644					AK036820	9930015A14Rik		ILMN_1237481	000430603	S	3575	AGGCGGATCTGACTCCTGGTCTCTGAGGGCTCTCGCGTTCAAGTGTACGA										
Mus musculus	RefSeq	ILMN_196825	ILMN_196825	LOC214133	XM_143535.1	XM_143535.1			20879412	XM_143535.1	LOC214133		ILMN_1221448	003870446	S	3384	CCGTCGCTGTTCTCAGAATGAAACGGTGAGAATCCAGAGACCTGTGGTGC										
Mus musculus	RefSeq	ILMN_220820	ILMN_220820	2310003F16RIK	NM_026318.2	NM_026318.2		67693	142388228	NM_026318.2	2310003F16Rik	NP_080594.2	ILMN_1257360	000110468	S	357	GGCAATGTGGTGGAGGCTCTTATTGCCCTAACCAACTGATAATGTGCTTT	2	+	121283942-121283980:121283981-121283991	2qE5	Mus musculus RIKEN cDNA 2310003F16 gene (2310003F16Rik), mRNA.				RP23-433P19.12; HSPC136; HYPK	RP23-433P19.12; HSPC136; HYPK
Mus musculus	RefSeq	ILMN_238251	ILMN_238251	EG633640	NM_001039244.1	NM_001039244.1		633640	85986652	NM_001039244.1	EG633640	NP_001034333.1	ILMN_2977390	002850598	S	791	GTCCCTGCCACACCTGTGCTCATTCCTGATGTATTTAACAGGGACCAGAC	13	+	120614254-120614303	13qD2.3	Mus musculus predicted gene, EG633640 (EG633640), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC29320; MGC118117	MGC29320; MGC118117
Mus musculus	RefSeq	ILMN_214714	ILMN_312499	LOC100047173	XR_033280.1	XR_033280.1		100047173	149253194	XR_033280.1	LOC100047173		ILMN_2651054	000010411	S	271	CAGACACTCCTGGAGCGGCCCTGTGAGTGGGTGGATGGCCTTCTGCCCCT					PREDICTED: Mus musculus similar to synaptotagmin-like 1 (LOC100047173), misc RNA.					
Mus musculus	RefSeq	ILMN_201099	ILMN_201099	LOC384781	XM_357862.1	XM_357862.1			38089116	XM_357862.1	LOC384781		ILMN_1229983	006380673	S	1332	CAATGAGTTCTCCATGCGATTCCTGATTGTCCTTGTGGAGCACACAGGCC										
Mus musculus	MEEBO	ILMN_214937	ILMN_214937	CDH8	scl34442.13_1	NM_007667.1			6680905	NM_007667.1	Cdh8		ILMN_2765569	004390424	S	2585	CTGGGCGAACTCTACTCTGTTGGTGAAAGTGACAAAGAAACTTGACAGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213741	ILMN_213741	DUSP6	NM_026268.1	NM_026268.1		67603	13399313	NM_026268.1	Dusp6	NP_080544.1	ILMN_2925711	000060239	S	2643	GTGCGAGTATGAGCGCCCATTTGGTGGATGCAACAGGTTGAGAGGAAGGG	10	+	98697023-98697072	10qD1	Mus musculus dual specificity phosphatase 6 (Dusp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	MGC98540; MKP3; PYST1; MKP-3; 1300019I03Rik	MGC98540; MKP3; PYST1; MKP-3; 1300019I03Rik
Mus musculus	MEEBO	ILMN_221676	ILMN_221676	BC021790	scl40027.11.1_8	NM_144824.1			21450204	NM_144824.1	BC021790		ILMN_1251519	002000093	S	1676	GTGTTCCCTGAGCCCACCAATAGCGGGGATGAAGGTGAGCTGGAGCTGGA										
Mus musculus	MEEBO	ILMN_195542	ILMN_195542	U55872	scl0057433.1_16	NM_020571.1			10181199	NM_020571.1	U55872		ILMN_1239291	003840524	S	16	ACACCTTTAATTGGTCAACACGATTTAGAAACAAAAGCACGTAAAGCGCG										
Mus musculus	RefSeq	ILMN_209499	ILMN_209499	KCNA6	NM_013568.4	NM_013568.4		16494	88014562	NM_013568.4	Kcna6	NP_038596.1	ILMN_3162587	001710220	I	1035	CTCTGTGTATCGTCTGGTTCACGTTTGAGCTCCTGGTGCGCTTCTCTGCC	6	-	126704688-126704737	6qF3	Mus musculus potassium voltage-gated channel, shaker-related, subfamily, member 6 (Kcna6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	Kv1.6; MK1.6	Kv1.6; MK1.6
Mus musculus	RefSeq	ILMN_211176	ILMN_239197	BRD8	NM_030147.2	NM_030147.2		78656	69354973	NM_030147.2	Brd8	NP_084423.2	ILMN_2613303	000510025	S	908	GACTTTGCCGAGTACCCCAGTCACCTCGTTTCCTGGGATTCCTGACACCC	18	-	34770221-34770270	18qB1	Mus musculus bromodomain containing 8 (Brd8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		SMAP; 4432404P07Rik; 2610007E11Rik	SMAP; 4432404P07Rik; 2610007E11Rik
Mus musculus	RefSeq	ILMN_211176	ILMN_239197	BRD8	NM_030147.2	NM_030147.2		78656	69354973	NM_030147.2	Brd8	NP_084423.2	ILMN_1216763	006660528	S	3321	GGCAGAAATCATGGGCTCTGTTAATGCCCTAATGTGTAACTAGCAGATTG	18	-	34759575-34759624	18qB1	Mus musculus bromodomain containing 8 (Brd8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		SMAP; 4432404P07Rik; 2610007E11Rik	SMAP; 4432404P07Rik; 2610007E11Rik
Mus musculus	RefSeq	ILMN_211176	ILMN_239197	BRD8	NM_030147.2	NM_030147.2		78656	69354973	NM_030147.2	Brd8	NP_084423.2	ILMN_2737826	006940286	S	1336	TTGCCAGTGAGCCGCCAGTTAAGCTTGTGCCACCCCCTGTAGAGTCTGTG	18	-	34768156-34768205	18qB1	Mus musculus bromodomain containing 8 (Brd8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		SMAP; 4432404P07Rik; 2610007E11Rik	SMAP; 4432404P07Rik; 2610007E11Rik
Mus musculus	RefSeq	ILMN_200897	ILMN_200897	LOC385453	XM_358237.1	XM_358237.1			38086905	XM_358237.1	LOC385453		ILMN_1254830	006510754	S	282	ACGCGTCTGTTGGGAGTCACCTGTGGGTGCTGGGTTCTGTTCAGCCATAG										
Mus musculus	RefSeq	ILMN_220854	ILMN_243019	DLEC1	XM_486268.3	XM_486268.3		320256	94386588	XM_486268.3	Dlec1	XP_486268.2	ILMN_2727768	005090201	S	1707	GCCTAGGACAGGCAGAAGAGACCTTCATCATCGTGTGTGACAACTGTCAG	9	+	119033257-119033306	9qF3	PREDICTED: Mus musculus deleted in lung and esophageal cancer 1, transcript variant 1 (Dlec1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]			
Mus musculus	RefSeq	ILMN_201570	ILMN_248292	LOC638935	XM_915139.3	XM_915139.3		638935	149253210	XM_915139.3	LOC638935	XP_920232.3	ILMN_1251972	002260358	S	4262	GAGTTTTGAAATGCTCCGTGAAGGGCTGAGGGACGGCAGGAAGATGGCGG					PREDICTED: Mus musculus similar to peptidylarginine deiminase, type II (LOC638935), mRNA.					
Mus musculus	RefSeq	ILMN_215124	ILMN_215124	ZCCHC17	NM_153160.2	NM_153160.2		619605	31981968	NM_153160.2	Zcchc17	NP_694800.1	ILMN_2658153	005700646	S	1488	ACACTTACTATGTTATCCAAGACCCTGGAAAGAGGCCAAGCCGAGGCACA	4	-	129993204-129993253	4qD2.2	Mus musculus zinc finger, CCHC domain containing 17 (Zcchc17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence TAS]	pS1D; HSPC251; pNO40; 2810055E05Rik; LDC4	pS1D; HSPC251; pNO40; 2810055E05Rik; LDC4
Mus musculus	RefSeq	ILMN_200846	ILMN_200846	LOC385395	XM_358223.1	XM_358223.1			38086522	XM_358223.1	LOC385395		ILMN_2540212	007210598	S	2	TGACTGGGGAATATACGAGCGAAGAGCACAAGAAGAAGCACCCGGATGCT										
Mus musculus	RefSeq	ILMN_200590	ILMN_259791	LOC621968	XM_915108.1	XM_915108.1		621968	82802625	XM_915108.1	LOC621968	XP_920201.1	ILMN_2539295	004010500	S	277	ACTGATACGGAGCTGAGGCTGCAAGTGGCCAACATGAGCCAGGGCAGAAC				6qB1	PREDICTED: Mus musculus similar to T-cell receptor beta chain V region E1 precursor (LOC621968), mRNA.					
Mus musculus	RefSeq	ILMN_223512	ILMN_223512	SUZ12	NM_199196.1	NM_199196.1		52615	40353213	NM_199196.1	Suz12	NP_954666.1	ILMN_3009010	000540491	S	3866	CTCTGATTTTTGCCTCTGGGTAGTGGGTTCTGAGCATTTCTCCTGGGCTT	11	+	79847118-79847167	11qB5	Mus musculus suppressor of zeste 12 homolog (Drosophila) (Suz12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IDA]; A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12 [goid 35098] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The modification of histones by addition of methyl groups [goid 16571] [evidence IMP]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IMP]; The modification of histones by addition of methyl groups [goid 16571] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence ISO]	mKIAA0160; AU016842; RP23-253E9.4; KIAA0160; D11Ertd530e; AW536442; 2610028O16Rik; AI195385	mKIAA0160; AU016842; RP23-253E9.4; KIAA0160; D11Ertd530e; AW536442; 2610028O16Rik; AI195385
Mus musculus	RefSeq	ILMN_223512	ILMN_223512	SUZ12	NM_199196.1	NM_199196.1		52615	40353213	NM_199196.1	Suz12	NP_954666.1	ILMN_2764991	000020494	S	4235	AGCATTTGAATGGTACAATAGATGTAAAAAAATTCAGTTTAAAAGAAACG	11	+	79847487-79847536	11qB5	Mus musculus suppressor of zeste 12 homolog (Drosophila) (Suz12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IDA]; A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12 [goid 35098] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The modification of histones by addition of methyl groups [goid 16571] [evidence IMP]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IMP]; The modification of histones by addition of methyl groups [goid 16571] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence ISO]	mKIAA0160; AU016842; RP23-253E9.4; KIAA0160; D11Ertd530e; AW536442; 2610028O16Rik; AI195385	mKIAA0160; AU016842; RP23-253E9.4; KIAA0160; D11Ertd530e; AW536442; 2610028O16Rik; AI195385
Mus musculus	RefSeq	ILMN_215865	ILMN_215865	DIS3	NM_028315.2	NM_028315.2		72662	145207991	NM_028315.2	Dis3	NP_082591.2	ILMN_1233613	005390010	S	3000	CTCAACAGCAACAAAATGGAGAGCATACTTACAGACTCCTGTGCGATAGC				14qE2.2	Mus musculus DIS3 mitotic control homolog (S. cerevisiae) (Dis3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]	2810028N01Rik	2810028N01Rik
Mus musculus	RefSeq	ILMN_201233	ILMN_246272	IL20RB	NM_001033543.2	NM_001033543.2		213208	142370392	NM_001033543.2	Il20rb	NP_001028715.1	ILMN_2541562	002850576	S	2062	GGAGAGATATGTAGGGGTGTGGGCAGATATGTAGGGGTGTGGGCTGAGGC	9	-	100358355-100358404	9qE3.3	Mus musculus interleukin 20 receptor beta (Il20rb), transcript variant 2, mRNA. XM_906440 XM_919838 XM_919854			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC130209; Fndc6; AV228068; Gm186	MGC130209; Fndc6; AV228068; Gm186
Mus musculus	Riken	ILMN_202375	ILMN_202375	KCNJ9	ri|4930526L21|PX00034C20|AK015907|1557					AK015907	Kcnj9		ILMN_2549132	002710398	S	1433	GTCCAGCAAAGCTCCCCTGGAGGTTACTTTTGACTGTGCTCGGTTTTCAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA];  [goid 15467] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215230	ILMN_319869	LOC100046143	XM_001475732.1	XM_001475732.1		100046143	149249423	XM_001475732.1	LOC100046143	XP_001475782.1	ILMN_2657009	004760605	S	695	TGGGAATGGCAAGAACAGCAGTATATTCTTTACACAAGTCCTCAACTAGG					PREDICTED: Mus musculus similar to Methyltransferase-like protein 5 (LOC100046143), mRNA.					
Mus musculus	RefSeq	ILMN_197974	ILMN_197974	LOC210497	XM_155929.3	XM_155929.3			38079918	XM_155929.3	LOC210497		ILMN_1247500	006590326	S	965	TCAGCCCAAACCCCCAGAATAAGGACAGGGGCTTAAGGAGCCCTAATCTC										
Mus musculus	RefSeq	ILMN_220987	ILMN_220987	TBX15	NM_009323.2	NM_009323.2		21384	124286801	NM_009323.2	Tbx15	NP_033349.2	ILMN_1249994	007050438	S	3319	GGTGTGGAGACTCGAATGATACCAAGATAATACAGATATTATTAAGAATT	3	+	99157935-99157984	3qF2.2	Mus musculus T-box 15 (Tbx15), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Tbx14; de; Tbx8	Tbx14; de; Tbx8
Mus musculus	Riken	ILMN_203458	ILMN_203458	4631414F19RIK	ri|4631414F19|PX00102A13|AK028468|2819					AK028468	4631414F19Rik		ILMN_1225114	000940709	S	2690	GCTATGCATCATCCACGGGTTCCCGCCTGACACACAGCTATATGAAGGGG										
Mus musculus	RefSeq	ILMN_215682	ILMN_215682	OLFR420	NM_146305.1	NM_146305.1		258302	22129676	NM_146305.1	Olfr420	NP_666417.1	ILMN_1241294	006760162	S	651	CATGTCCTATGTTGGTATTGTGGCTGTGATTCTGCGCATCCGTTCAGCTG	1	+	176089556-176089605	1qH3	Mus musculus olfactory receptor 420 (Olfr420), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR105-10	MOR105-10
Mus musculus	RefSeq	ILMN_191152	ILMN_227272	CALCOCO2	NM_029755.3	NM_029755.3		76815	154146210	NM_029755.3	Calcoco2	NP_084031.2	ILMN_2476579	001050747	S	1493	TAAATTAACTTTACATTCATACATTTTGTGCTGTGTTGATTTTATAAAGT				11qD	Mus musculus calcium binding and coiled-coil domain 2 (Calcoco2), transcript variant 1, mRNA. XM_989530 XM_989588 XM_992279 XM_992355	A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ndp52; C77254; Ndp52l1; 2410154J16Rik	Ndp52; C77254; Ndp52l1; 2410154J16Rik
Mus musculus	MEEBO	ILMN_210971	ILMN_210971	CCDC3	scl21321.4_587	XM_129987.2			23596071	XM_129987.2	Ccdc3		ILMN_2611180	005310471	S	2551	CAAGCTTAGGGGTGATGGAGTCAGGACTCGGAGAACTGTGGAAGCCGAAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_219387	ILMN_219387	HCCS	NM_008222.3	NM_008222.3		15159	142346469	NM_008222.3	Hccs	NP_032248.2	ILMN_2720828	002070091	S	2119	CAACACCTTAGAAATAGCTTTTTCTTAAATGTTGATAATATGAAAAATAT	X	-	165749613-165749662	XqF5	Mus musculus holocytochrome c synthetase (Hccs), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]		Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: holocytochrome c = apocytochrome c + heme [goid 4408] [evidence IEA]		
Mus musculus	RefSeq	ILMN_231082	ILMN_231082	RIPK4	NM_023663.3	NM_023663.3		72388	24475774	NM_023663.3	Ripk4	NP_076152.2	ILMN_2840856	001570598	S	3220	GAATGTGGGCAGAGGTGGCCATTGGAGATTGTTGTACTCTGAGGAGTCAG	16	-	97897138-97897187	16qC4	Mus musculus receptor-interacting serine-threonine kinase 4 (Ripk4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	PKK; DIk; AI552420; ANKK2; 2310069J12Rik; RIP4; Ankrd3	PKK; DIk; AI552420; ANKK2; 2310069J12Rik; RIP4; Ankrd3
Mus musculus	Riken	ILMN_204672	ILMN_204672	A130094L10RIK	ri|A130094L10|PX00126C20|AK038308|4286					AK038308	A130094L10Rik		ILMN_2566771	005570689	S	3986	CTGGGGCATCTGCAAGGCACACGGCAGAATGCAAACATGCTTCAGCTTCC										
Mus musculus	MEEBO	ILMN_192841	ILMN_192841	A430107N12RIK	scl2859.1.1_26						A430107N12Rik		ILMN_2491824	002970270	S	20	CACTTAGGTGAGCACTACATACTGTCAGTGAATGCAGGGCCTTGAAAGGA										
Mus musculus	MEEBO	ILMN_188960	ILMN_188960	PTPRD	scl00320681.1_0				51709270	XM_131462	Ptprd		ILMN_2457155	003710370	S	17	GCCTCAGGAAATGTACTATGGACAACCCATGCAAGAGTCACTAACGAGCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221351	ILMN_221351	DERL3	NM_024440.2	NM_024440.2		70377	133891759	NM_024440.2	Derl3	NP_077760.1	ILMN_1234931	007400719	S	844	ATGACAGGACACAGGGCCCAGAGAGGTCCCGGACTGCCTGCAGATGCTGA	10	+	75353197-75353246	10qC1	Mus musculus Der1-like domain family, member 3 (Derl3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			MGC118672; 1810063P04Rik; derlin-3; 1810006I20Rik; IZP6; MGC144274; MGC144275	MGC118672; 1810063P04Rik; derlin-3; 1810006I20Rik; IZP6; MGC144274; MGC144275
Mus musculus	Riken	ILMN_204049	ILMN_204049	A830081I21RIK	ri|A830081I21|PX00155N16|AK080676|3736					AK080676	A830081I21Rik		ILMN_1215223	001340369	S	3374	CCGGGGGTAGCTTGAGCATAGGAGACCTTAAAACCTGATCCCACAGTTAC										
Mus musculus	MEEBO	ILMN_195699	ILMN_195699	9627219_516	9627219_516						9627219_516		ILMN_2517886	001740377	S	14	CAATAGCGGATACAATGTCTCAATTAGATAGAGACAACTTAAAGGAGATG										
Mus musculus	RefSeq	ILMN_207522	ILMN_207522	1700026J12RIK	XM_148382.2	XM_148382.2			38079809	XM_148382.2	1700026J12Rik		ILMN_1260498	004050736	I	928	GACAAATACTTCATCAATTTCCAGGAAGTGGCTATCAAAAGGCATCATTA							Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]			
Mus musculus	RefSeq	ILMN_198094	ILMN_198094	LOC224549	XM_139765.1	XM_139765.1			20898657	XM_139765.1	LOC224549		ILMN_1230242	003370132	S	57	AGGAAAGTCGGATATTCAGCAGCTGGTCCTGTCTCCTTCCAGAGACCCTG										
Mus musculus	RefSeq	ILMN_197439	ILMN_197439	LOC381431	XM_355389.1	XM_355389.1			38075830	XM_355389.1	LOC381431		ILMN_2528143	002760309	S	342	CCCTATCTCTAGAACCCAGCAGCTTGCCAGCATTGTTGCAGGTTATAATC										
Mus musculus	RefSeq	ILMN_197230	ILMN_197230	LOC241385	XM_140905.2	XM_140905.2			38074688	XM_140905.2	LOC241385		ILMN_2527381	006400612	S	448	TCCATCATCGAACAGATTAGAAACCAGGGGTCCTGCGGCTCTTGTTGGGA										
Mus musculus	RefSeq	ILMN_217549	ILMN_217549	PCYOX1L	NM_172832.1	NM_172832.1		240334	27370247	NM_172832.1	Pcyox1l	NP_766420.1	ILMN_2684575	003870092	S	1667	ATTGAACAGGGTCCCCCATGTGGGCCCGGGCGATCTGCTGTCTGCTTATC	18	-	61822506-61822555	18qE1	Mus musculus prenylcysteine oxidase 1 like (Pcyox1l), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces oxygen [goid 16670] [evidence IEA]	C630049M13; BC060677	C630049M13; BC060677
Mus musculus	RefSeq	ILMN_197854	ILMN_317553	LOC100040854	XM_001476396.1	XM_001476396.1		100040854	149253251	XM_001476396.1	LOC100040854	XP_001476446.1	ILMN_1217820	006590367	S	1225	CGAGGTCAACTTCTGTGACAATGACATCTCCATGCCTGTCCTAACGAACC	4	+	143131495-143131544	4qE1	PREDICTED: Mus musculus similar to Predicted gene, OTTMUSG00000010207 (LOC100040854), mRNA.					
Mus musculus	RefSeq	ILMN_219414	ILMN_219414	FBXW8	NM_172721.2	NM_172721.2		231672	120407053	NM_172721.2	Fbxw8	NP_766309.2	ILMN_2708519	007200626	S	309	AAGGATACGTCCAGCCGATCGCGCTCACCCCCAGACCGCGACGCCACGGA	5	-	118605109-118605158	5qF	Mus musculus F-box and WD-40 domain protein 8 (Fbxw8), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		FBW6; FBW8; 4930438M06Rik; Fbx29; FBXO29	FBW6; FBW8; 4930438M06Rik; Fbx29; FBXO29
Mus musculus	RefSeq	ILMN_219414	ILMN_219414	FBXW8	NM_172721.2	NM_172721.2		231672	120407053	NM_172721.2	Fbxw8	NP_766309.2	ILMN_1251236	003140021	S	4895	CCAAGTCAGCTTCAGTGTGGTTGATGAAGAGCCTGTACTTACCTGTCCCC	5	-	118515023-118515072	5qF	Mus musculus F-box and WD-40 domain protein 8 (Fbxw8), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		FBW6; FBW8; 4930438M06Rik; Fbx29; FBXO29	FBW6; FBW8; 4930438M06Rik; Fbx29; FBXO29
Mus musculus	RefSeq	ILMN_198823	ILMN_247696	CEACAM16	NM_001033419.2	NM_001033419.2		330483	126432549	NM_001033419.2	Ceacam16	NP_001028591.2	ILMN_1225476	001940487	S	1318	GGTGCAAAAGCTGAACCTCACTGATGCCGGGCGCTACACACTCAAGACCG	7	-	20438971-20439020	7qA3	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 16 (Ceacam16), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm769	Gm769
Mus musculus	RefSeq	ILMN_247696	ILMN_247696	CEACAM16	NM_001033419.2	NM_001033419.2		330483	126432549	NM_001033419.2	Ceacam16	NP_001028591.2	ILMN_2981536	000450113	S	1041	ACTCCAAGACGCTGCTGTCTGGCTCTGCCTCAGTGGTAGTCAAGCTGTCC	7	-	20441423-20441472	7qA3	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 16 (Ceacam16), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm769	Gm769
Mus musculus	Riken	ILMN_203718	ILMN_203718	ST7	ri|9630048G22|PX00117A18|AK036248|2506					AK036248	St7		ILMN_2559450	000540369	S	2231	GAGTGGGCTCTAGGGATGGATCAAACTCAGACTACCAGGCTCATGTAAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_224233	ILMN_224233	1110055N21RIK	scl0109077.2_328				31341150	NM_176843	1110055N21Rik		ILMN_1227693	006450348	S	3200	CGTACGTAATGAGTGGTGTCACTTTTTTCAAACCCCACCATTTTTTCTAA										
Mus musculus	RefSeq	ILMN_195755	ILMN_195755	VIL1	NM_009509.1	NM_009509.1		22349	6678572	NM_009509.1	Vil1	NP_033535.1	ILMN_2518406	002350053	S	2587	GCTTTGTGCCGCCATTACTGGTTTTAGTCCTGTGGCAGATGAAAATGTCC	1	+	74481626-74481675	1qC3	Mus musculus villin 1 (Vil1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence TAS]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC143974; Vil	MGC143974; Vil
Mus musculus	Riken	ILMN_206992	ILMN_206992	5930400O16RIK	ri|5930400O16|PX00646C11|AK077820|643					AK077820	5930400O16Rik		ILMN_1216916	001230364	S	533	GGAGGCAGGGTCTTTCTGTGCAGTTATGGTAGCCTGAAACCCTATGTAGA										
Mus musculus	RefSeq	ILMN_254064	ILMN_254064	5730469M10RIK	NM_027464.1	NM_027464.1		70564	21312603	NM_027464.1	5730469M10Rik	NP_081740.2	ILMN_2796798	003180386	S	1157	GGCTAAGAAACAGCTCAGTGGTGGAGCATTTACCTAACATGCACATGGCC	14	-	39902783-39902832	14qB	Mus musculus RIKEN cDNA 5730469M10 gene (5730469M10Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AU040822	AU040822
Mus musculus	Riken	ILMN_205932	ILMN_205932	B230340J04RIK	ri|B230340J04|PX00159J08|AK046078|2103					AK046078	B230340J04Rik		ILMN_1229518	001190687	S	2047	AGAGGCCATCTTTGGCTACATAGTAATTTCAAGGCTCACTATATGACCCC										
Mus musculus	RefSeq	ILMN_190651	ILMN_246501	COMMD5	NM_025536.2	NM_025536.2		66398	141802424	NM_025536.2	Commd5	NP_079812.1	ILMN_1214793	003520176	S	673	TTCGAGGTGCCCATAGCCAAATTCCAGGAGCTGCGCTACAGCGTGGCGTT	15	+	76731402-76731451	15qD3	Mus musculus COMM domain containing 5 (Commd5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Hcarg; D15Ertd81e; AI854466; 2310065H03Rik	Hcarg; D15Ertd81e; AI854466; 2310065H03Rik
Mus musculus	RefSeq	ILMN_187959	ILMN_187959	ZRSR1	NM_011663.2	NM_011663.2		22183	118442835	NM_011663.2	Zrsr1	NP_035793.1	ILMN_2448615	006900195	S	2585	CCTAACACAGTATCCTTCAGATTCCCCAAAATATTCAAAACGAAACTGAT	11	+	22874613-22874662	11qA3.2	Mus musculus zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 (Zrsr1), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	35kDa; SP2; D11Ncvs75; U2afbp-rs; U2af1-rs1; Irlgs2	35kDa; SP2; D11Ncvs75; U2afbp-rs; U2af1-rs1; Irlgs2
Mus musculus	RefSeq	ILMN_188023	ILMN_235648	4833409A17RIK	NM_029011.2	NM_029011.2		74580	125858597	NM_029011.2	4833409A17Rik	NP_083287.2	ILMN_1249560	004490193	S	1896	CCAGCTCTACTTTGCCCGTCCAGTGCCCCAACACTCTGACTACAGATGCC	19	-	42802188-42802237	19qC3	Mus musculus RIKEN cDNA 4833409A17 gene (4833409A17Rik), mRNA. XM_901591 XM_901592 XM_901594 XM_917735 XM_925181 XM_978776 XM_978812 XM_978854 XM_978901		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail [goid 16117] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	3830409H07Rik	3830409H07Rik
Mus musculus	RefSeq	ILMN_201548	ILMN_201548	RAB33B	NM_016858.2	NM_016858.2		19338	145301587	NM_016858.2	Rab33b	NP_058554.1	ILMN_1217599	006180133	S	2799	CCAGGTGAGCAAGGACAACCCCTTTAGATGTGGTCCAAGGCGCTTGGGCT				3qC	Mus musculus RAB33B, member of RAS oncogene family (Rab33b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201401	ILMN_233898	LOC434083	XM_977336.1	XM_977336.1		434083	94419561	XM_977336.1	LOC434083	XP_982430.1	ILMN_1222659	000670482	S	240	CTGGATGCTCTTGGTGGAGCTTTTCAGAGTCACGCTGCATGTGGGACCCA				6qF1	PREDICTED: Mus musculus similar to Murinoglobulin-1 precursor (MuG1) (LOC434083), mRNA.					
Mus musculus	RefSeq	ILMN_192273	ILMN_192273	UBA2	NM_016682.2	NM_016682.2		50995	118131113	NM_016682.2	Uba2	NP_057891.1	ILMN_3160787	001240739	S	1988	GGCTTTGATGGTTCCGTTCAGCGTTCATTTGCTGAGACTGTTCGAGACTG	7	-	34926202-34926251	7qB1	Mus musculus ubiquitin-like modifier activating enzyme 2 (Uba2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	Ubl1a2; UBA2; Arx; UBA1; AA986091; Uble1b	Ubl1a2; UBA2; Arx; UBA1; AA986091; Uble1b
Mus musculus	RefSeq	ILMN_201089	ILMN_255803	EG627844	XM_892546.1	XM_892546.1		627844	82905210	XM_892546.1	EG627844	XP_897639.1	ILMN_2588076	006590301	S	478	GCTGAGTGTGCAGGTGTGTCCATGGGCTCTGGATCTACGTGTGCAGGTGT	7	+	38661982-38662031	7qB2	PREDICTED: Mus musculus predicted gene, EG627844 (EG627844), mRNA.					
Mus musculus	RefSeq	ILMN_221671	ILMN_221671	ACTA1	NM_009606.2	NM_009606.2		11459	133893192	NM_009606.2	Acta1	NP_033736.1	ILMN_2738825	002030450	S	1292	CCGCCACTGCAGCCGGCGCCTGTTTTTGACGTGTACATAGATTGACTCGT	8	-	126415758-126415807	8qE2	Mus musculus actin, alpha 1, skeletal muscle (Acta1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils [goid 5865] [evidence TAS]	The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Acts; AA959943; Actsk-1; Acta-2	Acts; AA959943; Actsk-1; Acta-2
Mus musculus	RefSeq	ILMN_210421	ILMN_210421	RANBP10	NM_145824.4	NM_145824.4		74334	117676379	NM_145824.4	Ranbp10	NP_665823.2	ILMN_2605453	005270441	S	5085	TCCCTCCATTATCAACTACAGCTGAAACTGGCATCCTCCACAGTGTGCAC	8	-	108292381-108292430	8qD3	Mus musculus RAN binding protein 10 (Ranbp10), mRNA.				4432417N03Rik	4432417N03Rik
Mus musculus	RefSeq	ILMN_213885	ILMN_213885	SLURP1	NM_020519.1	NM_020519.1		57277	10048457	NM_020519.1	Slurp1	NP_065265.1	ILMN_2641816	007550468	S	147	TTGCTCAGTGCAAGATGGAAGACACAGCCTGTAAGACTGTACTGGAGACA	15	-	74557921-74557970	15qD3	Mus musculus secreted Ly6/Plaur domain containing 1 (Slurp1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	MGC130552; AI415082; Slurp-1; 1110021N19Rik; ArsB; ARS	MGC130552; AI415082; Slurp-1; 1110021N19Rik; ArsB; ARS
Mus musculus	RefSeq	ILMN_211281	ILMN_211281	DNAJB4	NM_025926.1	NM_025926.1		67035	21313155	NM_025926.1	Dnajb4	NP_080202.1	ILMN_2614246	005560167	S	2049	TATGCACCTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGTGGTG	3	-	152121618-152121667	3qH3	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 4 (Dnajb4), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	1700029A20Rik; 2010306G19Rik; 5730460G06Rik	1700029A20Rik; 2010306G19Rik; 5730460G06Rik
Mus musculus	RefSeq	ILMN_221147	ILMN_229259	POLR2F	NM_027231.1	NM_027231.1		69833	58037180	NM_027231.1	Polr2f	NP_081507.1	ILMN_1237750	002470220	S	172	GGTGAGCGACCACAGGCCAACCAGAAGCGGATCACCACTCCTTACATGAC	15	+	78976516-78976565	15qE1	Mus musculus polymerase (RNA) II (DNA directed) polypeptide F (Polr2f), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits [goid 30880] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA on a template of DNA [goid 6351] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IDA]	1810060D16Rik	1810060D16Rik
Mus musculus	MEEBO	ILMN_186408	ILMN_186408	2010001H16RIK	scl069825.1_31						2010001H16Rik		ILMN_2435302	007100475	S	18	GCGGATACTCAGTCATGAAGTCCGGGTAGCGACTTCTCTTGGGTGGCCGT										
Mus musculus	RefSeq	ILMN_251204	ILMN_251204	DEFB29	NM_001001444.1	NM_001001444.1		75400	47824873	NM_001001444.1	Defb29	NP_001001444.1	ILMN_2802487	002450743	S	124	GCAAGAGGCAGGAGCCATGGATTGCGTGTGAGCTTTACCAGGGGTTATGC	2	-	152230386-152230435	2qH1	Mus musculus defensin beta 29 (Defb29), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		0610030I09Rik	0610030I09Rik
Mus musculus	RefSeq	ILMN_215713	ILMN_245949	ATP8B1	NM_001001488.3	NM_001001488.3		54670	95007005	NM_001001488.3	Atp8b1	NP_001001488.2	ILMN_2662734	000610100	S	3926	AGTATCTTCCAGGCGCTCAGCCTATGCCTTTTCGCATCAGAGAGGCTACG	18	-	64691097-64691146	18qE1	Mus musculus ATPase, class I, type 8B, member 1 (Atp8b1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]	Ic; FIC1; AI451886	Ic; FIC1; AI451886
Mus musculus	RefSeq	ILMN_245949	ILMN_245949	ATP8B1	NM_001001488.3	NM_001001488.3		54670	95007005	NM_001001488.3	Atp8b1	NP_001001488.2	ILMN_2977129	000990468	S	5910	CACAGAACAGTCCCCCTGCTCTACTGAAGGCCTCTGTGGGTTGTAGTAGG	18	-	64689113-64689162	18qE1	Mus musculus ATPase, class I, type 8B, member 1 (Atp8b1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]	Ic; FIC1; AI451886	Ic; FIC1; AI451886
Mus musculus	RefSeq	ILMN_205730	ILMN_245949	ATP8B1	NM_001001488.3	NM_001001488.3		54670	95007005	NM_001001488.3	Atp8b1	NP_001001488.2	ILMN_1254398	006840176	S	2350	CCAGCGTGGCCTCAAGCAACCGAGACGAAGCGTTGGATAAAGTGTACGAG	18	-	64712688-64712737	18qE1	Mus musculus ATPase, class I, type 8B, member 1 (Atp8b1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]	Ic; FIC1; AI451886	Ic; FIC1; AI451886
Mus musculus	RefSeq	ILMN_186296	ILMN_218767	NFIC	NM_026756.2	NM_026756.2		18029	84370350	NM_026756.2	Nfic	NP_081032.2	ILMN_1216381	005860026	S	3087	ACTATTTACCTAACTGCATGGTGCTTAAGGCCCCGCGACACCCAAGAGCC	10	-	80862017-80862066	10qC1	Mus musculus nuclear factor I/C (Nfic), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	NF1-C; 1110019L22Rik; AI746521; AA589446; 1500041O16Rik	NF1-C; 1110019L22Rik; AI746521; AA589446; 1500041O16Rik
Mus musculus	RefSeq	ILMN_218767	ILMN_218767	NFIC	NM_026756.2	NM_026756.2		18029	84370350	NM_026756.2	Nfic	NP_081032.2	ILMN_1218384	000290041	S	5809	CCACCCCATTCAGCCACTTTGTATTTTACTCCTGGGTCGATGCACCTCCG	10	-	80859295-80859344	10qC1	Mus musculus nuclear factor I/C (Nfic), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	NF1-C; 1110019L22Rik; AI746521; AA589446; 1500041O16Rik	NF1-C; 1110019L22Rik; AI746521; AA589446; 1500041O16Rik
Mus musculus	RefSeq	ILMN_191283	ILMN_191283	TSNAXIP1	NM_024445.2	NM_024445.2		72236	31340586	NM_024445.2	Tsnaxip1	NP_077765.1	ILMN_2881498	001070746	S	1811	GGATGAGGAAGGGCAGAGTGAGCCATTTGTGCAGAGGCTGTGGGAACAGT	8	+	108733240-108733289	8qD3	Mus musculus translin-associated factor X (Tsnax) interacting protein 1 (Tsnaxip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TXI1; 1700016K08Rik; MGC118240	TXI1; 1700016K08Rik; MGC118240
Mus musculus	RefSeq	ILMN_208799	ILMN_208799	EDNRB	NM_007904.2	NM_007904.2		13618	31542595	NM_007904.2	Ednrb	NP_031930.1	ILMN_2717765	000070044	S	61	TAACTTACTGTTAAGGCGCGGGTAGAGGCAACCGGGCTAGTGTGTTTTCA	14	-	102729265-102729314	14qE2.3	Mus musculus endothelin receptor type B (Ednrb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IDA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IGI]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The process whose specific outcome is the progression of the posterior midgut over time, from its formation to the mature structure [goid 7497] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with endothelin to initiate a change in cell activity [goid 4962] [evidence IMP]; A G-protein coupled receptor that binds all endothelin molecules with approximately equal affinity [goid 1600] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ETb; s; ET-B; Sox10m1; ET>B<; AU022549	ETb; s; ET-B; Sox10m1; ET>B<; AU022549
Mus musculus	RefSeq	ILMN_208799	ILMN_208799	EDNRB	NM_007904.2	NM_007904.2		13618	31542595	NM_007904.2	Ednrb	NP_031930.1	ILMN_2917471	000990767	S	3706	GGATGTTAGAGGTCAAACGATTTGTAAGTGACTTCAGCCTATTTTCTCCC	14	-	102700538-102700587	14qE2.3	Mus musculus endothelin receptor type B (Ednrb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IDA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IGI]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The process whose specific outcome is the progression of the posterior midgut over time, from its formation to the mature structure [goid 7497] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with endothelin to initiate a change in cell activity [goid 4962] [evidence IMP]; A G-protein coupled receptor that binds all endothelin molecules with approximately equal affinity [goid 1600] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ETb; s; ET-B; Sox10m1; ET>B<; AU022549	ETb; s; ET-B; Sox10m1; ET>B<; AU022549
Mus musculus	RefSeq	ILMN_200942	ILMN_235160	LOC385492	XM_979858.1	XM_979858.1		385492	94409069	XM_979858.1	LOC385492	XP_984952.1	ILMN_2540553	004290136	S	1384	AGCGAGCTGACTGGAGCATCCTGGACATTGCTGGGAGTGTGTGCTCGGAA					PREDICTED: Mus musculus similar to family with sequence similarity 48, member A isoform a (LOC385492), mRNA.					
Mus musculus	RefSeq	ILMN_215288	ILMN_222724	CSPP1	NM_026493.3	NM_026493.3		211660	124301209	NM_026493.3	Cspp1	NP_080769.3	ILMN_2735735	003710368	S	4256	GCCTCCATCTTATTTTTATGCTGATAGAAGCACAGACTGGGTTACTAATT	1	+	10126751-10126800	1qA2	Mus musculus centrosome and spindle pole associated protein 1 (Cspp1), mRNA.				BC055915; AA387550; 4930413O22Rik; 2310020J12Rik	BC055915; AA387550; 4930413O22Rik; 2310020J12Rik
Mus musculus	RefSeq	ILMN_201788	ILMN_222724	CSPP1	NM_026493.3	NM_026493.3		211660	124301209	NM_026493.3	Cspp1	NP_080769.3	ILMN_1219480	001780634	S	426	AGACGATATCTTACTCAGAAAAATTTCCTATCTACTGGTGAAACAGACCC	1	+	10048887-10048904:10054414-10054445	1qA2	Mus musculus centrosome and spindle pole associated protein 1 (Cspp1), mRNA.				BC055915; AA387550; 4930413O22Rik; 2310020J12Rik	BC055915; AA387550; 4930413O22Rik; 2310020J12Rik
Mus musculus	RefSeq	ILMN_199356	ILMN_199356	LOC386412	XM_359215.1	XM_359215.1			38081560	XM_359215.1	LOC386412		ILMN_1217695	002850280	S	1261	CCTGCCCTCAAATCTACGGCCTATTCATTCCCAAAGACCACTGAGCAGGC										
Mus musculus	RefSeq	ILMN_235154	ILMN_235154	PSG23	NM_020261.2	NM_020261.2		56868	19549328	NM_020261.2	Psg23	NP_064657.2	ILMN_2972829	004760474	S	1847	GGGTATTTTACCACTACTTGTACTCTGCCTTTCCCGTGACGTCAGCTCGG	7	-	17765147-17765196	7qA3	Mus musculus pregnancy-specific glycoprotein 23 (Psg23), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		cea11; 1620401C02Rik	cea11; 1620401C02Rik
Mus musculus	MEEBO	ILMN_222174	ILMN_222174	LOC213684	IGKV4-79_AJ231214_Ig_kappa_variable_4-79_9	XM_135590.2			38095234	XM_135590.2	LOC213684		ILMN_2745775	003780639	S	17	GATTTTCAGCTTCCTGCTAATCAGTGTCTCAGTCATAATGTCCAGAGGAC										
Mus musculus	RefSeq	ILMN_196481	ILMN_196481	AIG1-PENDING	XM_132255.5	XM_132255.5			38082868	XM_132255.5	Aig1-pending		ILMN_1239071	004610612	S	1791	CTTGGTGACAGGGAAGTGTTTAGTGAATGGTGACAGCTGCCCTAGGCTGC										
Mus musculus	MEEBO	ILMN_188328	ILMN_188328	IGHV1S130_AF304550_IG_HEAVY_VARIABLE_1S130_139	IGHV1S130_AF304550_Ig_heavy_variable_1S130_139						IGHV1S130_AF304550_Ig_heavy_variable_1S130_139		ILMN_1244192	004200040	S	18	CCTAATAGTGGTAATACTAACTACAATGAGAAGTTCAAGGGCAAGGCCAC										
Mus musculus	RefSeq	ILMN_196908	ILMN_196908	LOC213043	XM_136626.3	XM_136626.3			38049513	XM_136626.3	LOC213043		ILMN_1249043	004050017	S	2238	CCATCGAGGTCCCACCAAAGTTCAGTCCTATGGGCCACCAGTACCTCCAA										
Mus musculus	MEEBO	ILMN_184713	ILMN_184713	SCL0002624.1_576	scl0002624.1_576	AK087461.1			26104300	AK087461.1	scl0002624.1_576		ILMN_2420939	001740554	S	20	CACTCTGGACTACCCCCTTCGGCTAGACGGATGGAAAGTGAGCTCTGCGA										
Mus musculus	RefSeq	ILMN_250737	ILMN_250737	2010003O18RIK	NM_029645.2	NM_029645.2		384281	47087143	NM_029645.2	2010003O18Rik	NP_083921.1	ILMN_2807665	001410647	S	1671	AGCTCCACAGGGGTTGATGCTGTCTTTCTGGCCTCTGTAGGCACTAACAC	5	-	115594297-115594346	5qF	Mus musculus RIKEN cDNA 2010003O18 gene (2010003O18Rik), mRNA.					
Mus musculus	Riken	ILMN_203038	ILMN_203038	6720490M18RIK	ri|6720490M18|PX00060F14|AK033005|2164					AK033005	6720490M18Rik		ILMN_2554253	007400474	S	1456	GCCTGTGCCTCCGACAGCTGTTTCTATTGAAACCATAGACAGAAGTGAGG										
Mus musculus	RefSeq	ILMN_215206	ILMN_245422	MGAT5	XM_912670.2	XM_912670.2		107895	94364209	XM_912670.2	Mgat5	XP_917763.1	ILMN_1220306	003060121	S	3774	AGGCACATAACCTTGGTGGGGAAATAAATGCCTGTGGTGTCCTGAGGGCC				1qE3	PREDICTED: Mus musculus mannoside acetylglucosaminyltransferase 5, transcript variant 2 (Mgat5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl,1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-(N-acetyl-beta-D-glucosaminyl-1,6)-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R. Only branched mannose glycopeptides with non-reducing N-acetylglucosamine terminal residues act as acceptors [goid 30144] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IMP]		
Mus musculus	RefSeq	ILMN_209733	ILMN_209733	MFF	NM_029409.2	NM_029409.2		75734	40254162	NM_029409.2	Mff	NP_083685.2	ILMN_2732961	000610164	S	779	GCTCGGGTCTGTCCTCCCCATATGCTACCTGAAGATGGAGCTAATCTTTC	1	+	82738415-82738464	1qC5	Mus musculus mitochondrial fission factor (Mff), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			AI314724	AI314724
Mus musculus	RefSeq	ILMN_209733	ILMN_209733	MFF	NM_029409.2	NM_029409.2		75734	40254162	NM_029409.2	Mff	NP_083685.2	ILMN_2598648	005050646	S	1792	AGTCCATGTGTGAATGATTTAAAAACCTAAAAAATAAGGTATAAATGTAG	1	+	82748891-82748940	1qC5	Mus musculus mitochondrial fission factor (Mff), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			AI314724	AI314724
Mus musculus	RefSeq	ILMN_209733	ILMN_209733	MFF	NM_029409.2	NM_029409.2		75734	40254162	NM_029409.2	Mff	NP_083685.2	ILMN_2998593	003420736	S	1609	ACATCTCAACTGTAATGCTTTCTAAGTCACAGTGCTGTGCAGGACTGAAG	1	+	82748708-82748757	1qC5	Mus musculus mitochondrial fission factor (Mff), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			AI314724	AI314724
Mus musculus	MEEBO	ILMN_192253	ILMN_192253	GCAP3	scl0014483.1_1						Gcap3		ILMN_1221986	000060259	S	1	ATTCCGCTTGGGGGCCTCGCAGTGAACGAGCACCGGCTCAGCAACAAACT										
Mus musculus	MEEBO	ILMN_212594	ILMN_212594	5830417C01RIK	scl0078825.1_275	NM_024282.2			31542015	NM_024282.2	5830417C01Rik		ILMN_2741737	001170047	S	2255	CATCCAAGGTACTGACTGCAGCTTTAGATACGTGATTAGTGTGAGAGTCA										
Mus musculus	RefSeq	ILMN_208729	ILMN_208729	DCUN1D4	NM_178896.2	NM_178896.2		100737	31342262	NM_178896.2	Dcun1d4	NP_849227.1	ILMN_2883795	006960148	S	3853	GCTGTGACATGAACAGCAGCCAGCCTATTAACTGTGAATGCCTTGTGTCG	5	+	73839711-73839760	5qC3.3	Mus musculus DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) (Dcun1d4), mRNA.				AI836376; MGC117952	AI836376; MGC117952
Mus musculus	RefSeq	ILMN_238457	ILMN_238457	TAAR7A	NM_001010829.1	NM_001010829.1		215856	58082058	NM_001010829.1	Taar7a	NP_001010829.1	ILMN_2799145	004640131	S	453	CCCCCTGACCTACCCCACCAGGTTCACTGCTTCTGTTTCTGGCAAGTGCA	10	-	23712785-23712834	10qA4	Mus musculus trace amine-associated receptor 7A (Taar7a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm229	Gm229
Mus musculus	RefSeq	ILMN_193164	ILMN_193164	TMEM32	NM_146234.2	NM_146234.2		236792	31542203	NM_146234.2	Tmem32	NP_666346.1	ILMN_2910221	006250523	S	3661	CTGCCTAGGGTAGTTGAAAACCAGTGATCTGAGCTAGTGCTAGGTAAACC	X	-	52932669-52932718	XqA5	Mus musculus transmembrane protein 32 (Tmem32), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			MGC40705; 9630048L06Rik; BC032271	MGC40705; 9630048L06Rik; BC032271
Mus musculus	RefSeq	ILMN_193026	ILMN_250893	BRUNOL4	NM_133195.2	NM_133195.2		108013	141802187	NM_133195.2	Brunol4	NP_573458.1	ILMN_2638850	003290670	S	1781	GAGGGCTGTAACCTGCTCATCTACCATCTGCCCCAGGAGTTTGGGGACGC	18	-	25649668-25649717	18qA2	Mus musculus bruno-like 4, RNA binding protein (Drosophila) (Brunol4), mRNA. XM_919930 XM_919943 XM_919956 XM_919979 XM_919988 XM_920000 XM_920011 XM_920025 XM_920039	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]	Brul4; A230070D14Rik; C130060B05Rik; BRUNOL-4; CELF4	Brul4; A230070D14Rik; C130060B05Rik; BRUNOL-4; CELF4
Mus musculus	RefSeq	ILMN_193026	ILMN_250893	BRUNOL4	NM_133195.2	NM_133195.2		108013	141802187	NM_133195.2	Brunol4	NP_573458.1	ILMN_1243635	004480731	S	2301	AATGAAATAACGTGAGCCCAGATGGGGAAGCTGAAGGGCTGGGCACTAGG	18	-	25637891-25637940	18qA2	Mus musculus bruno-like 4, RNA binding protein (Drosophila) (Brunol4), mRNA. XM_919930 XM_919943 XM_919956 XM_919979 XM_919988 XM_920000 XM_920011 XM_920025 XM_920039	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]	Brul4; A230070D14Rik; C130060B05Rik; BRUNOL-4; CELF4	Brul4; A230070D14Rik; C130060B05Rik; BRUNOL-4; CELF4
Mus musculus	MEEBO	ILMN_190022	ILMN_190022	9630061B06RIK	scl0320245.1_17						9630061B06Rik		ILMN_2466497	005310095	S	11	AAAGACGACCCACAGTGGACGATCCAGCGGCAGAGTCGCCGCTTCCGCTT										
Mus musculus	RefSeq	ILMN_222198	ILMN_222198	STAT5B	NM_011489.2	NM_011489.2		20851	31543779	NM_011489.2	Stat5b	NP_035619.2	ILMN_2746194	003780609	S	5107	CAGATTAGTATATAGCCACCAAAAAAGTATTGTGTATAAATTGAGGCAGC	11	-	100645834-100645861:100648523-100648544	11qD	Mus musculus signal transducer and activator of transcription 5B (Stat5b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48541] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation [goid 45588] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of lymphocyte differentiation [goid 45621] [evidence IGI]; The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation [goid 1553] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IGI]; The chemical reactions and pathways involving progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants [goid 42448] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte differentiation [goid 45647] [evidence IGI]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the secondary female sexual characteristics over time, from their formation to the mature structures. In female humans, these include growth of axillary and pubic hair, breast development and menstrual periods. Their development occurs in response to sex hormone secretion [goid 46543] [evidence IMP]; The process whose specific outcome is the progression of the secondary male sexual characteristics over time, from their formation to the mature structures. In male humans, these include growth of axillary, chest, and pubic hair, voice changes, and testicular/penile enlargement. Development occurs in response to sex hormone secretion [goid 46544] [evidence IGI]; The process whose specific outcome is the progression of the secondary male sexual characteristics over time, from their formation to the mature structures. In male humans, these include growth of axillary, chest, and pubic hair, voice changes, and testicular/penile enlargement. Development occurs in response to sex hormone secretion [goid 46544] [evidence IMP]; Any process that modulates the frequency, rate or extent of epithelial cell differentiation [goid 30856] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [evidence IGI]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IGI]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids [goid 19218] [evidence IGI]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IGI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_185093	ILMN_244467	GFPT2	NM_013529.2	NM_013529.2		14584	142386698	NM_013529.2	Gfpt2	NP_038557.1	ILMN_1214822	002600463	S	2799	CACTTTGGTCCCGGCTCCCAGCCTGAGATGCCCCACACAAGAGGGTGGTT	11	+	49651969-49652018	11qB1.2	Mus musculus glutamine fructose-6-phosphate transaminase 2 (Gfpt2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence TAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate [goid 4360] [evidence TAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	GFAT2; AI480523	GFAT2; AI480523
Mus musculus	RefSeq	ILMN_199719	ILMN_199719	LOC383859	XM_357297.1	XM_357297.1			38076536	XM_357297.1	LOC383859		ILMN_1254455	007050142	S	27	CGAGGGCAGCTCTAAAAGGGTGGAGCATAGAGATAAGCAAGGAGGAATTG										
Mus musculus	RefSeq	ILMN_192721	ILMN_238444	0610010F05RIK	NM_027860.2	NM_027860.2		71675	117956374	NM_027860.2	0610010F05Rik	NP_082136.2	ILMN_2490699	000830088	S	659	TGAAAACTGTACTGCTCGTAATGCTGGAGAAGAGACTGGAGAATCTGAAG	11	-	23522436-23522485	11qA3.2	Mus musculus RIKEN cDNA 0610010F05 gene (0610010F05Rik), mRNA.				RP23-188K3.6; mKIAA1841	RP23-188K3.6; mKIAA1841
Mus musculus	RefSeq	ILMN_216372	ILMN_238444	0610010F05RIK	NM_027860.2	NM_027860.2		71675	117956374	NM_027860.2	0610010F05Rik	NP_082136.2	ILMN_2712923	005290564	S	1702	CGCCTTCTTGCCCACCTGCTAAAATACTGGATGATCTGCACAAGCACAAA	11	-	23495418-23495467	11qA3.2	Mus musculus RIKEN cDNA 0610010F05 gene (0610010F05Rik), mRNA.				RP23-188K3.6; mKIAA1841	RP23-188K3.6; mKIAA1841
Mus musculus	RefSeq	ILMN_199784	ILMN_314163	LOC100048081	XM_001479481.1	XM_001479481.1		100048081	149251883	XM_001479481.1	LOC100048081	XP_001479531.1	ILMN_2588065	000460544	S	87	GCTGTAAGTACCCATGGCCGGGATGCTGTAAGTACCCATGACCGGGATGC					PREDICTED: Mus musculus similar to CG32603-PA (LOC100048081), mRNA.					
Mus musculus	MEEBO	ILMN_193763	ILMN_193763	SCL0001489.1_43	scl0001489.1_43	AF108718.1			5442033	AF108718.1	scl0001489.1_43		ILMN_2500194	001440711	S	7	CCCAGAAGCTGAGGGCCTCCCACCAGTGGGCCCCCCACCCTGCCCATCTC										
Mus musculus	RefSeq	ILMN_198719	ILMN_198719	LOC244137	XM_145941.2	XM_145941.2			38087051	XM_145941.2	LOC244137		ILMN_1233995	004250722	S	1128	AGGAGAAACATGGGCCGTGGAGGCTATGGTGGTGGCCTTCCCCAGTGAAG										
Mus musculus	RefSeq	ILMN_212707	ILMN_212707	1810007P19RIK	NM_172701.2	NM_172701.2		230751	124244065	NM_172701.2	1810007P19Rik	NP_766289.2	ILMN_2719322	001030026	S	1275	TAGCCCTCCCTCAAGAGACTGCCTTAGACCACCCTGGACACGGATGGCTG	4	+	125765701-125765750	4qD2.2	Mus musculus RIKEN cDNA 1810007P19 gene (1810007P19Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		6030436A01Rik; 5730415O04; OSCP1	6030436A01Rik; 5730415O04; OSCP1
Mus musculus	RefSeq	ILMN_212707	ILMN_212707	1810007P19RIK	NM_172701.2	NM_172701.2		230751	124244065	NM_172701.2	1810007P19Rik	NP_766289.2	ILMN_2629400	002490674	S	1511	GATGACTATGGGCGCCTCCTGGGCCATTGCGGGTTTTCCACAGCGTCTTT	4	+	125765937-125765986	4qD2.2	Mus musculus RIKEN cDNA 1810007P19 gene (1810007P19Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		6030436A01Rik; 5730415O04; OSCP1	6030436A01Rik; 5730415O04; OSCP1
Mus musculus	MEEBO	ILMN_195129	ILMN_195129	USP53	scl0018688.1_2	NM_008834.1			6679306	NM_008834.1	Usp53		ILMN_2512846	005420563	S	16	AGGACATTTGAATAGACCTCTCCCCCTCATATTTAAATAGATACCATGCA							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	Riken	ILMN_203320	ILMN_203320	COL14A1	ri|D930004P21|PX00093B16|AK052963|2083					AK052963	Col14a1		ILMN_1229714	001820129	S	1832	CTGGGCCTCTGAACCAAGACTCTATCCCAAAGGCCACTTTACTGAGGCTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190591	ILMN_235062	1700123O12RIK	XM_896951.2	XM_896951.2		73624	94371466	XM_896951.2	1700123O12Rik	XP_902044.1	ILMN_2471507	006520767	S	71	GCAACATAGTGGACAACTAGATATCCAACCACGTAACTTGGTGACTTGGA	4	-	10724822-10724871	4qA1	PREDICTED: Mus musculus RIKEN cDNA 1700123O12 gene, transcript variant 1 (1700123O12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_189353	ILMN_259263	ENPP3	NM_134005.2	NM_134005.2		209558	154240723	NM_134005.2	Enpp3	NP_598766.2	ILMN_1258381	007400750	S	1267	TATTTTCCTAAAATAAACTTCTATATGTATCAAGGACCTGCTCCTCGAAT				10qA4	Mus musculus ectonucleotide pyrophosphatase/phosphodiesterase 3 (Enpp3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [evidence IEA]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [evidence IEA]	MGC6548; AI876438; CD203c	MGC6548; AI876438; CD203c
Mus musculus	RefSeq	ILMN_234601	ILMN_234601	CHRNA10	NM_001081424.1	NM_001081424.1		504186	124487260	NM_001081424.1	Chrna10	NP_001074893.1	ILMN_3073529	000240500	I	1853	GTGCTGCTAAGAGTCAGAGACACCTCTTCAGGACCAGCACTTCTGACCTC	7	-	109260390-109260439	7qE3	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 10 (Chrna10), mRNA.		The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IMP]		
Mus musculus	RefSeq	ILMN_201770	ILMN_234601	CHRNA10	NM_001081424.1	NM_001081424.1		504186	124487260	NM_001081424.1	Chrna10	NP_001074893.1	ILMN_1252409	001070743	S	2347	GTCCCTTTAATTAGTAACCTACACCCAAGCCAGGCATAGTGGCACCTGTG	7	-	109259896-109259945	7qE3	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 10 (Chrna10), mRNA.		The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IMP]		
Mus musculus	RefSeq	ILMN_234601	ILMN_234601	CHRNA10	NM_001081424.1	NM_001081424.1		504186	124487260	NM_001081424.1	Chrna10	NP_001074893.1	ILMN_3073524	000630521	I	2423	CCCGGGAGGGAACTCACTGTCTAGTTTCCAAAACAGAAGGCTGTGCAGAC	7	-	109259820-109259869	7qE3	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 10 (Chrna10), mRNA.		The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IMP]		
Mus musculus	MEEBO	ILMN_210340	ILMN_210340	4930546K05RIK	scl35984.2.1_10				51764816	XM_489269	4930546K05Rik		ILMN_2604579	004280553	S	120	GGATTCCATCCTGTTAGACAAGCTGCACACAACAGAATGACCAAGGGCGA										
Mus musculus	RefSeq	ILMN_210926	ILMN_210926	OLFR402	NM_146708.1	NM_146708.1		258703	22129418	NM_146708.1	Olfr402	NP_666919.1	ILMN_1241786	003290717	S	766	GGCACAGGCATGTTTAACTACATGAGACTGGGTTCCACCAAATTTTCAGA	11	+	73969423-73969472	11qB5	Mus musculus olfactory receptor 402 (Olfr402), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR255-4; RP23-20M18.2	MOR255-4; RP23-20M18.2
Mus musculus	RefSeq	ILMN_220130	ILMN_220130	MDM2	NM_010786.3	NM_010786.3		17246	141801983	NM_010786.3	Mdm2	NP_034916.1	ILMN_1250774	003310243	S	2905	GGTGCGGCAGCCTGGGCAGCTTCAGTCCCGATTTACAATAAAGTACCTTG	10	-	117126033-117126082	10qD2	Mus musculus transformed mouse 3T3 cell double minute 2 (Mdm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IDA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one of the p53 family of proteins [goid 2039] [evidence IPI]	1700007J15Rik; AA415488; Mdm-2	1700007J15Rik; AA415488; Mdm-2
Mus musculus	RefSeq	ILMN_220130	ILMN_220130	MDM2	NM_010786.3	NM_010786.3		17246	141801983	NM_010786.3	Mdm2	NP_034916.1	ILMN_1229882	002190113	S	1269	CTCTGAAAAAGCCAAACTGGAAAACTCAGCTCAGGCAGAAGAAGGCTTGG	10	-	117127669-117127718	10qD2	Mus musculus transformed mouse 3T3 cell double minute 2 (Mdm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IDA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one of the p53 family of proteins [goid 2039] [evidence IPI]	1700007J15Rik; AA415488; Mdm-2	1700007J15Rik; AA415488; Mdm-2
Mus musculus	RefSeq	ILMN_219907	ILMN_219907	NPSR1	NM_175678.3	NM_175678.3		319239	142358598	NM_175678.3	Npsr1	NP_783609.1	ILMN_2715058	002970600	S	3262	GTCCTATGACCCTGGGTGAATCATGCTGTGTCTCTGGGCACCACTAGTCT	9	+	24120313-24120362	9qA3-qA4	Mus musculus neuropeptide S receptor 1 (Npsr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]	PGR14; Gpr154; VRR1; 9330128H10Rik; GPRA	PGR14; Gpr154; VRR1; 9330128H10Rik; GPRA
Mus musculus	RefSeq	ILMN_217542	ILMN_217542	SRPK3	NM_019684.1	NM_019684.1		56504	9790110	NM_019684.1	Srpk3	NP_062658.1	ILMN_2684515	000020465	S	1866	GGCAAGGCCCATATCTCAACCTGTCTACTTGTGATCCTTCTAGATGCTCC	X	+	71021624-71021673	XqA7.3	Mus musculus serine/arginine-rich protein specific kinase 3 (Srpk3), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	Mssk1; Stk23	Mssk1; Stk23
Mus musculus	RefSeq	ILMN_215508	ILMN_215508	1110003E01RIK	NM_133697.3	NM_133697.3		68552	141801855	NM_133697.3	1110003E01Rik	NP_598458.1	ILMN_1225158	006110577	S	905	CCTCACAACCTCCAGCTGGCTTTATGGCTAGAATACGGAAAGCGAACTGG	5	-	65841123-65841172	5qC3.1	Mus musculus RIKEN cDNA 1110003E01 gene (1110003E01Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC7185; 1700127H04Rik; 5430439C17Rik	MGC7185; 1700127H04Rik; 5430439C17Rik
Mus musculus	MEEBO	ILMN_184731	ILMN_184731	9628654_2_RC	9628654_2_rc						9628654_2_rc		ILMN_2421108	001400463	S	12	AGGCCACGTTTCGGATGCAAACAGCAAAAGGCTTTATTGGGAACACGGGT										
Mus musculus	RefSeq	ILMN_215033	ILMN_215033	RTN4IP1	NM_130892.2	NM_130892.2		170728	31543607	NM_130892.2	Rtn4ip1	NP_570962.2	ILMN_2950957	007570551	S	2736	AGGCCTGAGGAGCATTCTCTTGATTGATGGTTGGTGGATGGGTCCAGCCC	10	+	43636032-43636081	10qB2	Mus musculus reticulon 4 interacting protein 1 (Rtn4ip1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	NIMP; D10Ertd690e	NIMP; D10Ertd690e
Mus musculus	RefSeq	ILMN_211057	ILMN_211057	1810046J19RIK	NM_025559.2	NM_025559.2		103742	111074525	NM_025559.2	1810046J19Rik	NP_079835.1	ILMN_1250709	007040286	S	604	GATCTGTGCCCTCTGCAGTTTGGTCCTCTCCCCAGCGTGGCAATACCTTT	11	-	98299112-98299161	11qD	Mus musculus RIKEN cDNA 1810046J19 gene (1810046J19Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	Rdx12; AI463380	Rdx12; AI463380
Mus musculus	RefSeq	ILMN_211871	ILMN_211871	ARL2	NM_019722.3	NM_019722.3		56327	32129285	NM_019722.3	Arl2	NP_062696.2	ILMN_2620304	005090528	S	528	CCTGCTGCCTGGCATCGACTGGCTCCTTGATGACATTTCCAGTCGTGTCT	19	-	6134680-6134729	19qA	Mus musculus ADP-ribosylation factor-like 2 (Arl2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW553335; 2610009M23Rik; AI115441	AW553335; 2610009M23Rik; AI115441
Mus musculus	Riken	ILMN_205552	ILMN_205552	4932418B07RIK	ri|4932418B07|PX00017P17|AK030051|2918					AK030051	4932418B07Rik		ILMN_2573434	006250402	S	2297	GGCCCCTTTGGGTAAGAGGAGGAAAATGAAGAGGACCAGCACCAGCACAG										
Mus musculus	MEEBO	ILMN_223959	ILMN_223959	GPR23	scl078134.3_260				31341492	NM_175271	Gpr23		ILMN_1242617	007320739	S	2673	AGCACATTGTAGCCAAGGCGCTGCTGAATTTGTGCTCAGGTCGGGAGCAT										
Mus musculus	RefSeq	ILMN_197374	ILMN_197374	LOC212148	XM_138718.3	XM_138718.3			38075420	XM_138718.3	LOC212148		ILMN_1245485	000730608	S	1760	TATAGGACATGACTGCTGGGGGCTAGGGCTCCCTCACTGACTGTGCAGAG										
Mus musculus	RefSeq	ILMN_217111	ILMN_217111	SLC7A14	NM_172861.2	NM_172861.2		241919	40254250	NM_172861.2	Slc7a14	NP_766449.1	ILMN_2719361	007400224	S	5121	ATTTATCTTAGGAAATCTCTTCTGGTGGGTTTCAGTGTGTGTGAAGCCGA	3	-	31105423-31105472	3qA3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 (Slc7a14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	A930013N06; BC061928	A930013N06; BC061928
Mus musculus	RefSeq	ILMN_217111	ILMN_217111	SLC7A14	NM_172861.2	NM_172861.2		241919	40254250	NM_172861.2	Slc7a14	NP_766449.1	ILMN_2679229	003520398	S	2613	GCCTAGAGAGGGTGGTTTCTTAGTACATCAGCCTATGTGCTAGAAGGTGG	3	-	31107931-31107980	3qA3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 (Slc7a14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	A930013N06; BC061928	A930013N06; BC061928
Mus musculus	RefSeq	ILMN_217111	ILMN_217111	SLC7A14	NM_172861.2	NM_172861.2		241919	40254250	NM_172861.2	Slc7a14	NP_766449.1	ILMN_2968123	000730722	S	5120	TATTTATCTTAGGAAATCTCTTCTGGTGGGTTTCAGTGTGTGTGAAGCCG	3	-	31105424-31105473	3qA3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 (Slc7a14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	A930013N06; BC061928	A930013N06; BC061928
Mus musculus	MEEBO	ILMN_191320	ILMN_191320	RNMT	scl51808.12_202				31543598	NM_026440	Rnmt		ILMN_2478092	006350368	S	9	CCTGGCAGGAATAGAGATAGATTATTCTTCACGGTGTGGAGACCTGGTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA [goid 5845] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript [goid 6370] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the reaction: S-adenosyl-L-methionine + G(5')pppR-RNA = S-adenosyl-L-homocysteine + m7G(5')pppR-RNA; m7G(5')pppR-RNA is mRNA containing an N7-methylguanine cap; R may be guanosine or adenosine [goid 4482] [evidence ISO]		
Mus musculus	RefSeq	ILMN_211687	ILMN_211687	NAPEPLD	NM_178728.5	NM_178728.5		242864	146198749	NM_178728.5	Napepld	NP_848843.1	ILMN_2618526	001190735	S	3121	CATTTAAAGTCAGCTTGAGGAAAACCGGGCAAGCGTCGGCTCTCCACTGC				5qA3	Mus musculus N-acyl phosphatidylethanolamine phospholipase D (Napepld), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Mbldc1; NAPE-PLD; A530089G06	Mbldc1; NAPE-PLD; A530089G06
Mus musculus	RefSeq	ILMN_222959	ILMN_222959	BSDC1	NM_133889.2	NM_133889.2		100383	31981602	NM_133889.2	Bsdc1	NP_598650.2	ILMN_1234100	002680040	S	2370	GGGGCATCCACCAGTGACTCATTTAAAGGGGCTTGGTCAGGGTTGCTGTG	4	+	129165387-129165436	4qD2.2	Mus musculus BSD domain containing 1 (Bsdc1), mRNA.				1110063F24Rik; AW011758	1110063F24Rik; AW011758
Mus musculus	RefSeq	ILMN_212403	ILMN_212403	SRP19	NM_025527.1	NM_025527.1		66384	13384947	NM_025527.1	Srp19	NP_079803.1	ILMN_2871111	007330497	S	694	CAGATAATGACTGTCCCATCAGTTACTTGAAATACTATATCTGTTTGTCC	18	+	34461256-34461305	18qB1	Mus musculus signal recognition particle 19 (Srp19), mRNA.	A complex of protein and RNA which facilitates translocation of proteins across membranes [goid 48500] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with 7S RNA, the RNA component of the signal recognition particle (SRP) [goid 8312] [evidence IEA]	2310020D23Rik	2310020D23Rik
Mus musculus	Riken	ILMN_206072	ILMN_206072	D930002M03RIK	ri|D930002M03|PX00200H23|AK052952|1695					AK052952	D930002M03Rik		ILMN_1220958	003120577	S	1473	TGCTGTCAGGTCGCCTGGGTGGATCACTGAGAACATTGTGTGGTGCCATC										
Mus musculus	Riken	ILMN_204564	ILMN_204564	KIF17	ri|B930001E07|PX00162P03|AK046890|1969					AK046890	KIF17		ILMN_1251085	000060451	S	1838	CGAGGATGTATAATTCAACGACCCATGCTGCTGGGAGCCAGCTTCCTGTG										
Mus musculus	MEEBO	ILMN_190370	ILMN_190370	FMO2	scl16031.11.1_197				31542818	NM_018881	Fmo2		ILMN_2604975	006380021	S	2985	AGGGGCAGGGGGAGGTTGTCAGTTATGAGAGACATTTTCTTGGAACGGAA						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IDA]		
Mus musculus	MEEBO	ILMN_190370	ILMN_190370	FMO2	scl16031.11.1_197				31542818	NM_018881	Fmo2		ILMN_2469578	001340386	S	6	ACTGATATTACTACATTTGCATTTAAGACTCTTGACTGTACTTATAAGCA						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199489	ILMN_199489	LOC383558	XM_358733.1	XM_358733.1			38073353	XM_358733.1	LOC383558		ILMN_1224849	002070333	S	432	GCCTGTGAGAACGCAGCATCAGGAGAAGGTTGTGAGCATTCCCAGACATG										
Mus musculus	RefSeq	ILMN_216437	ILMN_216437	SH2D1B1	NM_012009.2	NM_012009.2		26904	31542591	NM_012009.2	Sh2d1b1	NP_036139.2	ILMN_2978617	001780609	S	2444	GTAACTCAATGGTCGAGAACTTGCTTAGCGTGTGCAAAGGCCCCAGGGTC	1	+	172123344-172123393	1qH3	Mus musculus SH2 domain protein 1B1 (Sh2d1b1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity [goid 45953] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; A series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of a natural killer cell capable of inhibiting an immune effector process contributing to an immune response [goid 2769] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50732] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IDA]	Eat2a; Sh2d1b; Eat2; EAT-2; EAT-2A	Eat2a; Sh2d1b; Eat2; EAT-2; EAT-2A
Mus musculus	MEEBO	ILMN_210099	ILMN_210099	4930583K01RIK	scl32147.2_380	NM_183267.1			34304053	NM_183267.1	4930583K01Rik		ILMN_2602212	005270091	S	677	CTTTGACTCAAGACAGAAATTCCCACAAGGAATTGGCCAGACCCAGGCCT										
Mus musculus	MEEBO	ILMN_184418	ILMN_184418	PSG16	scl0026436.1_186				46849784	NM_007676	Psg16		ILMN_2458434	002900379	S	19	GCGAATCCAAACCATACAAGTTGTCTGGGGACATTAGAGCAGGTCATTGC										
Mus musculus	RefSeq	ILMN_222628	ILMN_222628	PAQR9	NM_198414.2	NM_198414.2		75552	116089313	NM_198414.2	Paqr9	NP_940806.2	ILMN_3021711	003890619	I	5	GGAGCAGCCCGCTTCCAAGCCGAGGCCGCGTAGCCAACCTGCGGCCGCGG	9	+	95460240-95460289	9qE3.3	Mus musculus progestin and adipoQ receptor family member IX (Paqr9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1700020G04Rik	1700020G04Rik
Mus musculus	RefSeq	ILMN_222628	ILMN_222628	PAQR9	NM_198414.2	NM_198414.2		75552	116089313	NM_198414.2	Paqr9	NP_940806.2	ILMN_2752524	000650731	S	1922	GCACACGTGAACTGGACCTTAGGGCAAGCTGCTTGAGAGAGTTCTCGACT	9	+	95462157-95462206	9qE3.3	Mus musculus progestin and adipoQ receptor family member IX (Paqr9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1700020G04Rik	1700020G04Rik
Mus musculus	RefSeq	ILMN_222628	ILMN_222628	PAQR9	NM_198414.2	NM_198414.2		75552	116089313	NM_198414.2	Paqr9	NP_940806.2	ILMN_3094043	003440739	A	1722	GGGCACAAAGACACAAACCCGGGGCTTAACCCGCTAGACAATGCATGGAA	9	+	95461957-95462006	9qE3.3	Mus musculus progestin and adipoQ receptor family member IX (Paqr9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1700020G04Rik	1700020G04Rik
Mus musculus	RefSeq	ILMN_219194	ILMN_219194	COQ3	NM_172687.1	NM_172687.1		230027	27369991	NM_172687.1	Coq3	NP_766275.1	ILMN_2973089	005570575	S	2424	TGGGAGATATGATCTTGGTGGATGTGTGTCACTGGTGGTGGGATCTGAGG	4	+	21839084-21839133	4qA3	Mus musculus coenzyme Q3 homolog, methyltransferase (yeast) (Coq3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 2-polyprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine [goid 8425] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + 3-hexaprenyl-4,5-dihydroxybenzoate = S-adenosyl-L-homocysteine + 3-hexaprenyl-4-hydroxy-5-methoxybenzoate [goid 4395] [evidence IEA]	C77934; 4732433J24	C77934; 4732433J24
Mus musculus	RefSeq	ILMN_219194	ILMN_219194	COQ3	NM_172687.1	NM_172687.1		230027	27369991	NM_172687.1	Coq3	NP_766275.1	ILMN_2973097	003190273	S	2346	GGTGGTTTCAATGAGAATGTTCCCCGTAGGCTTGTATGTTTAAATTCTTG	4	+	21839006-21839055	4qA3	Mus musculus coenzyme Q3 homolog, methyltransferase (yeast) (Coq3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 2-polyprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine [goid 8425] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + 3-hexaprenyl-4,5-dihydroxybenzoate = S-adenosyl-L-homocysteine + 3-hexaprenyl-4-hydroxy-5-methoxybenzoate [goid 4395] [evidence IEA]	C77934; 4732433J24	C77934; 4732433J24
Mus musculus	RefSeq	ILMN_210171	ILMN_210171	SMPDL3B	NM_133888.2	NM_133888.2		100340	118130844	NM_133888.2	Smpdl3b	NP_598649.1	ILMN_2602938	003440132	S	1829	GTCCCTGCTCAAGGTCTGAACTGGGAACGTACGTGGTGTGCAAAACCCCT	4	-	132288927-132288976	4qD2.3	Mus musculus sphingomyelin phosphodiesterase, acid-like 3B (Smpdl3b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IEA]	AU045240; Asml3b; 1110054A24Rik	AU045240; Asml3b; 1110054A24Rik
Mus musculus	RefSeq	ILMN_211878	ILMN_211878	RBM41	NM_153586.1	NM_153586.1		237073	23956383	NM_153586.1	Rbm41	NP_705814.1	ILMN_1239385	006290333	S	1080	TCCGAATGATGACTGGACGCATGAGGGGGCAAGCTTTCCTCACCTTTCCC	X	-	136480432-136480442:136489446-136489484	XqF1	Mus musculus RNA binding motif protein 41 (Rbm41), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D330023I21Rik; MGC47195; BB131279	D330023I21Rik; MGC47195; BB131279
Mus musculus	RefSeq	ILMN_211878	ILMN_211878	RBM41	NM_153586.1	NM_153586.1		237073	23956383	NM_153586.1	Rbm41	NP_705814.1	ILMN_2719569	000840132	S	2565	CCACTAAGTACATCAAACAACATATAATAAGAATTTCATTCAAAAGCGAG	X	-	136478947-136478996	XqF1	Mus musculus RNA binding motif protein 41 (Rbm41), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D330023I21Rik; MGC47195; BB131279	D330023I21Rik; MGC47195; BB131279
Mus musculus	RefSeq	ILMN_211878	ILMN_211878	RBM41	NM_153586.1	NM_153586.1		237073	23956383	NM_153586.1	Rbm41	NP_705814.1	ILMN_2927847	006100619	S	2357	GGAGTCAGACCTGTGACCCTCAAAGTCACCCATGTTTACCATCCTGAGCT	X	-	136479155-136479204	XqF1	Mus musculus RNA binding motif protein 41 (Rbm41), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D330023I21Rik; MGC47195; BB131279	D330023I21Rik; MGC47195; BB131279
Mus musculus	RefSeq	ILMN_214030	ILMN_214030	PCDHB18	NM_053143.2	NM_053143.2		93889	84872171	NM_053143.2	Pcdhb18	NP_444373.1	ILMN_2643460	002510477	S	2429	GGAGGTTCCTCTGGTACCAGTGATTTCAAGTTCTTGAAATCGATTTACCC	18	+	37651547-37651596	18qB3	Mus musculus protocadherin beta 18 (Pcdhb18), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcdhb9; MGC107468; PcdhbR	Pcdhb9; MGC107468; PcdhbR
Mus musculus	RefSeq	ILMN_241076	ILMN_241076	ABCA3	NM_001039581.1	NM_001039581.1		27410	88853070	NM_001039581.1	Abca3	NP_001034670.1	ILMN_3150233	003800647	A	6180	GTCATCCCACAGAGCATCGGCAGCACAAGAGAGAGCTGTGGCCAGACTTG	17	+	24546946-24546995	17qA3.3	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 3 (Abca3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; A membrane-bounded organelle, specialized for the storage and secretion various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae. Has some similar properties to, but is distinct from, a lysosome [goid 42599] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence ISO]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	ABC-C; 1810036E22Rik; Abc3; MGC90532	ABC-C; 1810036E22Rik; Abc3; MGC90532
Mus musculus	MEEBO	ILMN_188173	ILMN_188173	4933427G23	scl0330053.3_30				38079581	XM_284069	4933427G23		ILMN_2450399	000510259	S	18	CTCCATCGCGCTCCCCCACGGATGATCTCCAGACTGCCGTTCAGTCCTAT										
Mus musculus	RefSeq	ILMN_184933	ILMN_245467	NCOA4	NM_001033988.1	NM_001033988.1		27057	77404401	NM_001033988.1	Ncoa4	NP_001029160.1	ILMN_1259989	003850376	S	1840	GTGGCTACTTCGAAAGAAGGCACAGGAAGCATTTCTTAATTCACCCCTAC	14	+	32990117-32990141:32990419-32990443	14qB	Mus musculus nuclear receptor coactivator 4 (Ncoa4), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC103382; 1110034E15Rik; 4432406M01Rik; Rfg; AI227008	MGC103382; 1110034E15Rik; 4432406M01Rik; Rfg; AI227008
Mus musculus	RefSeq	ILMN_245467	ILMN_245467	NCOA4	NM_001033988.1	NM_001033988.1		27057	77404401	NM_001033988.1	Ncoa4	NP_001029160.1	ILMN_3132361	001740441	A	1638	AGAATAGTTCCTTGTCAGAGTGGCTTATGGGGCCTACGTGCAAAGGAGGC	14	+	32989915-32989964	14qB	Mus musculus nuclear receptor coactivator 4 (Ncoa4), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC103382; 1110034E15Rik; 4432406M01Rik; Rfg; AI227008	MGC103382; 1110034E15Rik; 4432406M01Rik; Rfg; AI227008
Mus musculus	RefSeq	ILMN_190987	ILMN_245467	NCOA4	NM_001033988.1	NM_001033988.1		27057	77404401	NM_001033988.1	Ncoa4	NP_001029160.1	ILMN_2475086	001580564	S	3340	TTAAAACATAATTTAAGTTAATCACTTGCTAATGATATATAAAACTTTCT	14	+	32992343-32992392	14qB	Mus musculus nuclear receptor coactivator 4 (Ncoa4), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC103382; 1110034E15Rik; 4432406M01Rik; Rfg; AI227008	MGC103382; 1110034E15Rik; 4432406M01Rik; Rfg; AI227008
Mus musculus	RefSeq	ILMN_216627	ILMN_216627	IRF8	NM_008320.3	NM_008320.3		15900	118130835	NM_008320.3	Irf8	NP_032346.1	ILMN_2673369	004610373	S	2564	ACAGGGTCGACAGAGTGTGTGATACATGCAAACAGAATCCTTGGAGTGTG	8	+	123280329-123280378	8qE1	Mus musculus interferon regulatory factor 8 (Irf8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	Myls; IRF-8; ICSBP; AI893568; Icsbp1	Myls; IRF-8; ICSBP; AI893568; Icsbp1
Mus musculus	MEEBO	ILMN_209871	ILMN_209871	PLK4	scl0002053.1_260	NM_011495.1			27501453	NM_011495.1	Plk4		ILMN_2600004	003450600	S	3124	AGTGGTCATAAGGCTAGGACATCTAATTTTGCTCCAAGCATGTAATCCTT							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220191	ILMN_220191	1600012H06RIK	NM_026451.1	NM_026451.1		67912	29789176	NM_026451.1	1600012H06Rik	NP_080727.1	ILMN_3009738	002760673	S	2092	AGAAGCTGGCTTTCTATGGCCTTTTCCTCCACTATTCTAACAGTGTTCTC	17	+	14682098-14682147	17qA2	Mus musculus RIKEN cDNA 1600012H06 gene (1600012H06Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_220191	ILMN_220191	1600012H06RIK	NM_026451.1	NM_026451.1		67912	29789176	NM_026451.1	1600012H06Rik	NP_080727.1	ILMN_3009735	002750471	S	1860	CCTGGGATTTTTCAGTGGGAGGGAGTACAGACTGGTTCCTTAAGCCAAGG	17	+	14681866-14681915	17qA2	Mus musculus RIKEN cDNA 1600012H06 gene (1600012H06Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_184727	ILMN_240865	GTF3C4	NM_172977.2	NM_172977.2		269252	142385912	NM_172977.2	Gtf3c4	NP_766565.1	ILMN_2618346	006960326	S	3543	CCTGAAGCATTCTGGAGTCACAGTCGGGGTATTAGAGTAAGTTTCCTGGG	2	-	28681173-28681222	2qA3	Mus musculus general transcription factor IIIC, polypeptide 4 (Gtf3c4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]	AU014771; AI426938; AU017413; 5330400C03	AU014771; AI426938; AU017413; 5330400C03
Mus musculus	RefSeq	ILMN_184727	ILMN_240865	GTF3C4	NM_172977.2	NM_172977.2		269252	142385912	NM_172977.2	Gtf3c4	NP_766565.1	ILMN_1228542	002810041	S	3556	GGAGTCACAGTCGGGGTATTAGAGTAAGTTTCCTGGGATTGGTGCTAATG	2	-	28681160-28681209	2qA3	Mus musculus general transcription factor IIIC, polypeptide 4 (Gtf3c4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]	AU014771; AI426938; AU017413; 5330400C03	AU014771; AI426938; AU017413; 5330400C03
Mus musculus	RefSeq	ILMN_216720	ILMN_216720	GPX2	NM_030677.2	NM_030677.2		14776	145275167	NM_030677.2	Gpx2	NP_109602.2	ILMN_2674483	002680291	S	865	CCCCTTGCCTTCCCTACCGGCCATTTCCTTTAGCTCCCTCAAGGCTCTTG				12qC3	Mus musculus glutathione peroxidase 2 (Gpx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IGI]; An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism [goid 51702] [evidence IGI]; Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus [goid 2862] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic bacterium, a bacterium living in close physical association with another organism [goid 9609] [evidence IGI]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence ISS]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IMP]	GSHPx-GI; GPx-GI; GSHPx-2	GSHPx-GI; GPx-GI; GSHPx-2
Mus musculus	MEEBO	ILMN_221787	ILMN_221787	1110012N22RIK	scl39226.2.178_25	XM_126634.3			38092611	XM_126634.3	1110012N22Rik		ILMN_1231340	005870044	S	853	CCAGGAAGCCCTTCAACCCATCAACTGAGTGTCCTTCAGGTCTTACAGCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_203663	ILMN_203663	E2F6	ri|9430090E10|PX00110N10|AK035116|2143					AK035116	E2f6		ILMN_1253173	006840397	S	1963	GGGATTTGTAACATCTACCCCCAGCCCCACCCCAAGGACAAGGGGATATC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that regulates transcription such that the target genes are transcribed during the G1/S phase of the mitotic cell cycle [goid 83] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_201328	ILMN_201328	LOC382452	XM_356515.1	XM_356515.1			38090948	XM_356515.1	LOC382452		ILMN_1218954	004210474	S	122	CCTGGAAGTCACAGCAGGTCACACGATGGCTAGGAGTAAAGGAGAAAGGC										
Mus musculus	Riken	ILMN_204868	ILMN_204868	A130083J16RIK	ri|A130083J16|PX00125N23|AK038165|1791					AK038165	A130083J16Rik		ILMN_2568229	004780292	S	1311	TAGCTATGAGCTGCTGTGTGGGTGCTAGGAATTGAACTCAGGTCCCCTGG										
Mus musculus	RefSeq	ILMN_214229	ILMN_214229	NR1I2	NM_010936.1	NM_010936.1		18171	33468912	NM_010936.1	Nr1i2	NP_035066.1	ILMN_2645737	005290343	S	1795	CTGTGGGAAGTGCTGGCCTATGAGTTAAGACAATCTTTGTGGTTGGGAAT	16	-	38168269-38168318	16qB3	Mus musculus nuclear receptor subfamily 1, group I, member 2 (Nr1i2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISO]	PXR; mPXR; PXR.2; PXR1; SXR; PXR.1	PXR; mPXR; PXR.2; PXR1; SXR; PXR.1
Mus musculus	MEEBO	ILMN_214468	ILMN_214468	FGF9	scl014180.2_25	NM_013518.1			7305056	NM_013518.1	Fgf9		ILMN_2648289	000150075	S	456	ATTCGCGGTGTGGACAGTGGACTCTACCTCGGCATGAACGAGAAGGGGGA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IGI]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 45743] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The specification of male sex of an individual organism [goid 30238] [evidence IGI]; The specification of male sex of an individual organism [goid 30238] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IDA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The process controlling the timing and/or rate at which relatively unspecialized cells acquire specialized features [goid 48505] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200754	ILMN_200754	LOC385306	XM_358180.1	XM_358180.1			38085901	XM_358180.1	LOC385306		ILMN_1241678	006660605	S	67	ACAGTCCACCGACACTTCACTCGAGTACGGACGTCGGGAGATGCCGCCTG										
Mus musculus	Riken	ILMN_202124	ILMN_202124	2900024O10RIK	ri|2900024O10|ZX00068B18|AK013594|1053					AK013594	2900024O10Rik		ILMN_2547186	007100463	S	562	TGTCACTGAGGGAGGGGCTTGGAGAGCGTGTACAGCATGTTACAGACCTC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_254951	ILMN_254951	BRSK1	NM_001003920.2	NM_001003920.2		381979	83649714	NM_001003920.2	Brsk1	NP_001003920.2	ILMN_3104328	001850433	A	2377	AAGCCTGCAGCCCCCACCAGGCCGCTCTGACCCTGATCTGAGTAGCTCTC	7	+	4666980-4667029	7qA1	Mus musculus BR serine/threonine kinase 1 (Brsk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence ISO]; A signal transduction-based surveillance mechanism that acts during a mitotic cell cycle to ensure accurate chromosome segregation by preventing entry into mitosis in the presence of damaged DNA [goid 7095] [evidence ISO]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; The specification and formation of anisotropic intracellular organization or cell growth patterns [goid 30010] [evidence IGI]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Gm1100; MGC99905; SAD-B; SADB	Gm1100; MGC99905; SAD-B; SADB
Mus musculus	RefSeq	ILMN_201062	ILMN_254951	BRSK1	NM_001003920.2	NM_001003920.2		381979	83649714	NM_001003920.2	Brsk1	NP_001003920.2	ILMN_2540940	001440670	S	2433	GAGGACCCCCTAAGGACAAGAAGCTCCTGGCCACCAATGGAACCCCTCTA	7	+	4667036-4667085	7qA1	Mus musculus BR serine/threonine kinase 1 (Brsk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence ISO]; A signal transduction-based surveillance mechanism that acts during a mitotic cell cycle to ensure accurate chromosome segregation by preventing entry into mitosis in the presence of damaged DNA [goid 7095] [evidence ISO]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; The specification and formation of anisotropic intracellular organization or cell growth patterns [goid 30010] [evidence IGI]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Gm1100; MGC99905; SAD-B; SADB	Gm1100; MGC99905; SAD-B; SADB
Mus musculus	RefSeq	ILMN_234957	ILMN_234957	FBXO33	NM_001033156.3	NM_001033156.3		70611	146198524	NM_001033156.3	Fbxo33	NP_001028328.1	ILMN_3162369	001170474	S	2965	GACAGTCTGCAATAATAAAGTGAGTAGCCAACGTGGGTGCCCAGCAGTGC				12qC1	Mus musculus F-box protein 33 (Fbxo33), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI642135; 5730501N20Rik	AI642135; 5730501N20Rik
Mus musculus	RefSeq	ILMN_201362	ILMN_201362	LOC382547	XM_356562.1	XM_356562.1			38092030	XM_356562.1	LOC382547		ILMN_1215640	006860259	S	7	GAGACAGGTATGAAGCGGCCACTGAGCCCACCCCCCTCAGGTGAGAAGGA										
Mus musculus	RefSeq	ILMN_217632	ILMN_244904	LOC668758	XM_001005206.2	XM_001005206.2		668758	149260368	XM_001005206.2	LOC668758	XP_001005206.2	ILMN_2685725	000770274	S	1145	CGAAATAGGAATTATCAGCAAATGTCTGGCTACATTATAAAAACATTATG	9	-	109225891-109225912:109228636-109228663	9qF2	PREDICTED: Mus musculus similar to F-box and WD-40 domain protein 14, transcript variant 3 (LOC668758), mRNA.					
Mus musculus	Riken	ILMN_202249	ILMN_202249	3632411M23RIK	ri|3632411M23|PX00010K14|AK014396|3409					AK014396	3632411M23Rik		ILMN_1256339	004180767	S	973	GTGGAGATCCAGACCGCAGGCTGAAGGTAGCTATAGACTTCACTGCCTCT										
Mus musculus	RefSeq	ILMN_198503	ILMN_198503	LOC330474	XM_284266.2	XM_284266.2			38085880	XM_284266.2	LOC330474		ILMN_1250055	001940148	S	3806	AGACAGGGAAGGCCAGCACAGATGGGGCCACAGCCACGGACAGATACAAT										
Mus musculus	RefSeq	ILMN_221369	ILMN_221369	HAGH	NM_024284.1	NM_024284.1		14651	21729785	NM_024284.1	Hagh	NP_077246.1	ILMN_2734661	002600541	S	816	AGCCCACGGTGCCATCCACCCTGGCAGAAGAGTTCACCTACAACCCCTTC	17	+	25000641-25000690	17qA3.3	Mus musculus hydroxyacyl glutathione hydrolase (Hagh), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: (S)-(2-hydroxyacyl)glutathione + H2O = glutathione + a 2-hydroxy carboxylate [goid 4416] [evidence IDA]	Glo-2; Rsp29; BC019817; Glo2	Glo-2; Rsp29; BC019817; Glo2
Mus musculus	RefSeq	ILMN_199274	ILMN_199274	LOC331066	XM_285674.2	XM_285674.2			38093682	XM_285674.2	LOC331066		ILMN_1237346	002650292	S	79	GTTGCATCCCTTTTGTCCCACAGCAATAATGACGATGAGGACCTGACACC										
Mus musculus	RefSeq	ILMN_249959	ILMN_249959	NLRP9A	NM_001048219.1	NM_001048219.1		233001	115299742	NM_001048219.1	Nlrp9a	NP_001041684.1	ILMN_3099303	003520072	A	2865	TGACTGGAATGCCTTTGACCATTCTGGGCTGGAGATGCTCTGTAAGGCCT	7	+	27356346-27356395	7qA3	Mus musculus NLR family, pyrin domain containing 9A (Nlrp9a), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D7Ertd565e; Nalp-theta; Nalp9a	D7Ertd565e; Nalp-theta; Nalp9a
Mus musculus	RefSeq	ILMN_211685	ILMN_211685	TAF5	NM_177342.3	NM_177342.3		226182	110665721	NM_177342.3	Taf5	NP_796316.2	ILMN_1218205	004180441	S	2892	CCCTTCACCCACCATTAGTGGACTGTATGGAACTGAGTAGGGACCACACT	19	+	47157603-47157652	19qC3	Mus musculus TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	6330528C20Rik; AV117817	6330528C20Rik; AV117817
Mus musculus	RefSeq	ILMN_211685	ILMN_211685	TAF5	NM_177342.3	NM_177342.3		226182	110665721	NM_177342.3	Taf5	NP_796316.2	ILMN_2638968	002570722	S	1910	GAATTGCACTAGATTTCATCCAAATTCGAACTATGTTGCTACGGGCTCTG	19	+	47156359-47156408	19qC3	Mus musculus TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	6330528C20Rik; AV117817	6330528C20Rik; AV117817
Mus musculus	RefSeq	ILMN_211685	ILMN_211685	TAF5	NM_177342.3	NM_177342.3		226182	110665721	NM_177342.3	Taf5	NP_796316.2	ILMN_1218425	007560494	S	1799	TTCTCCATACGGATATTATTTCGTGTCAGGAGGCCATGACCGAGTAGCTC	19	+	47155145-47155194	19qC3	Mus musculus TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	6330528C20Rik; AV117817	6330528C20Rik; AV117817
Mus musculus	RefSeq	ILMN_213068	ILMN_213068	COX10	NM_178379.2	NM_178379.2		70383	31341635	NM_178379.2	Cox10	NP_848466.1	ILMN_2633212	004150196	S	1498	TGTCAGCTGGTGGCAGATCATCTGGTGCTGTGTCGTCACTTCCCAGTCCT	11	-	63777444-63777493	11qB3	Mus musculus COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast) (Cox10), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions [goid 17004] [evidence IDA]; The division of a mitochondrion within a cell to form two or more separate mitochondrial compartments [goid 266] [evidence IMP]; The covalent attachment of a farnesyl moiety to a protein amino acid [goid 18347] [evidence ISO]; The chemical reactions and pathways resulting in the formation of heme a, a derivative of heme found in cytochrome aa3 [goid 6784] [evidence IDA]; The chemical reactions and pathways resulting in the formation of heme a, a derivative of heme found in cytochrome aa3 [goid 6784] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: trans,trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate [goid 4311] [evidence ISO]	AU042636; RP23-78H18.1; 2410004F01Rik	AU042636; RP23-78H18.1; 2410004F01Rik
Mus musculus	RefSeq	ILMN_257922	ILMN_257922	KLK6	NM_011177.1	NM_011177.1		19144	6755179	NM_011177.1	Klk6	NP_035307.1	ILMN_2955509	002070669	S	856	CTCCGAGGGCTCGTGTCATGGGGTGACATGCCCTGTGGATCAAAGGAGAA	7	+	51086895-51086944	7qB4	Mus musculus kallikrein related-peptidase 6 (Klk6), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Klk7; Prss18; Klk29; Prss9; AI849898; Bssp; neurosin	Klk7; Prss18; Klk29; Prss9; AI849898; Bssp; neurosin
Mus musculus	RefSeq	ILMN_215025	ILMN_313489	LOC100040671	XR_032179.1	XR_032179.1		100040671	149264830	XR_032179.1	LOC100040671		ILMN_2654679	002940673	S	1916	GCTGCATCGTTGCTGTCAAATATTTAGCTACTGTGAAAATCCTGTGGATG	14	+	3076693-3076742	14qA1	PREDICTED: Mus musculus similar to 1700001E04Rik protein (LOC100040671), misc RNA.					
Mus musculus	RefSeq	ILMN_209585	ILMN_209585	LRCH4	NM_146164.1	NM_146164.1		231798	22122700	NM_146164.1	Lrch4	NP_666276.1	ILMN_2693094	001820114	S	2174	GACCTCAGAAGCCCCACTCTCATACCCACAATACCCTTACCCTTAGTGCT	5	+	138081480-138081529	5qG2	Mus musculus leucine-rich repeats and calponin homology (CH) domain containing 4 (Lrch4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]	SAP25; 2810008P14Rik; 2900069C24Rik; MGC19364; LRRN4; mFLJ00248; LRN; AI558103	SAP25; 2810008P14Rik; 2900069C24Rik; MGC19364; LRRN4; mFLJ00248; LRN; AI558103
Mus musculus	RefSeq	ILMN_209585	ILMN_209585	LRCH4	NM_146164.1	NM_146164.1		231798	22122700	NM_146164.1	Lrch4	NP_666276.1	ILMN_2597210	006020091	S	2184	GCCCCACTCTCATACCCACAATACCCTTACCCTTAGTGCTGATGGTGCCT	5	+	138081490-138081539	5qG2	Mus musculus leucine-rich repeats and calponin homology (CH) domain containing 4 (Lrch4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]	SAP25; 2810008P14Rik; 2900069C24Rik; MGC19364; LRRN4; mFLJ00248; LRN; AI558103	SAP25; 2810008P14Rik; 2900069C24Rik; MGC19364; LRRN4; mFLJ00248; LRN; AI558103
Mus musculus	RefSeq	ILMN_210524	ILMN_255264	GNGT2	NM_001038664.2	NM_001038664.2		14710	113461989	NM_001038664.2	Gngt2	NP_001033753.2	ILMN_1246056	007330379	S	344	TCAAGGATTATGTAGAGGCCCAAGCAGGGACAGACCCTCTTCTCAAAGGC	11	+	95706819-95706868	11qD	Mus musculus guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 (Gngt2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AV096488	AV096488
Mus musculus	RefSeq	ILMN_200226	ILMN_200226	LOC385992	XM_359028.1	XM_359028.1			38081001	XM_359028.1	LOC385992		ILMN_1231472	006130292	S	74	CAACTTCACCCAATCCTGGGCACCCCAACACACCCAAAAATCTAGACACG										
Mus musculus	MEEBO	ILMN_188851	ILMN_188851	SHMT1	scl40142.12_149				6677942	NM_009171	Shmt1		ILMN_1238412	006200468	S	1	CAGCAGAGGCCAAAGGCTTTATATTCCACCTGCCTGAGATAAGCAGCTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [evidence IEA]; The chemical reactions and pathways involving L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6563] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188851	ILMN_188851	SHMT1	scl40142.12_149				6677942	NM_009171	Shmt1		ILMN_2726055	000430468	S	941	GACCACTACAACCCACAAGACCCTGAGAGGCTGCCGTGCTGGTATGATAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [evidence IEA]; The chemical reactions and pathways involving L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6563] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216676	ILMN_216676	CDC37L1	NM_025950.2	NM_025950.2		67072	141802417	NM_025950.2	Cdc37l1	NP_080226.1	ILMN_2673926	000150767	S	878	GCAGCCTGTGACAGTTCAGAATCATGTCCCCCATTCTGGTGTTGGATGCA	19	+	29086468-29086517	19qC1	Mus musculus cell division cycle 37 homolog (S. cerevisiae)-like 1 (Cdc37l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	Harc; BB159850; 2700033A15Rik; Cdc37l	Harc; BB159850; 2700033A15Rik; Cdc37l
Mus musculus	RefSeq	ILMN_216676	ILMN_216676	CDC37L1	NM_025950.2	NM_025950.2		67072	141802417	NM_025950.2	Cdc37l1	NP_080226.1	ILMN_2749686	000870706	S	2365	CAGCCGATGGGGCACCTAACCCTGTGGAAATGGACTGGAATTGTTGAATC	19	+	29091907-29091956	19qC1	Mus musculus cell division cycle 37 homolog (S. cerevisiae)-like 1 (Cdc37l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	Harc; BB159850; 2700033A15Rik; Cdc37l	Harc; BB159850; 2700033A15Rik; Cdc37l
Mus musculus	RefSeq	ILMN_216676	ILMN_216676	CDC37L1	NM_025950.2	NM_025950.2		67072	141802417	NM_025950.2	Cdc37l1	NP_080226.1	ILMN_1242724	002480195	S	721	TGGAAATGGCCAAAAACTGCAATGTGGATCCAAGAGGCTGTTTTCGTTTG	19	+	29082118-29082167	19qC1	Mus musculus cell division cycle 37 homolog (S. cerevisiae)-like 1 (Cdc37l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	Harc; BB159850; 2700033A15Rik; Cdc37l	Harc; BB159850; 2700033A15Rik; Cdc37l
Mus musculus	RefSeq	ILMN_222431	ILMN_222431	PTPN22	NM_008979.1	NM_008979.1		19260	6679554	NM_008979.1	Ptpn22	NP_033005.1	ILMN_2766313	001510209	S	2570	AAAGCTACTTGAATACTGCTATAATAATAATATCAGTAATGAGGATATAT	3	+	103689888-103689937	3qF2.2	Mus musculus protein tyrosine phosphatase, non-receptor type 22 (lymphoid) (Ptpn22), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	PEP; 70zpep; Ptpn8	PEP; 70zpep; Ptpn8
Mus musculus	RefSeq	ILMN_222431	ILMN_222431	PTPN22	NM_008979.1	NM_008979.1		19260	6679554	NM_008979.1	Ptpn22	NP_033005.1	ILMN_1220975	005900593	S	2394	CCTCACCAAGCAAGCCTACAGAACGTGTTCAGCCAAAAAATTCCAGCTCC	3	+	103689712-103689761	3qF2.2	Mus musculus protein tyrosine phosphatase, non-receptor type 22 (lymphoid) (Ptpn22), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	PEP; 70zpep; Ptpn8	PEP; 70zpep; Ptpn8
Mus musculus	RefSeq	ILMN_214739	ILMN_214739	PHKA1	NM_008832.2	NM_008832.2		18679	153945839	NM_008832.2	Phka1	NP_032858.2	ILMN_2755333	001980524	S	2369	CGGAAGGGAGGGCTAGATCGGTTCCGAGCTGCTGTGCAAACAACTTGCGA				XqD	Mus musculus phosphorylase kinase alpha 1 (Phka1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Phka; 5330411D17; 9830108K24Rik	Phka; 5330411D17; 9830108K24Rik
Mus musculus	MEEBO	ILMN_218380	ILMN_218380	1700010H22RIK	scl26342.5.1_143	NM_029312.1			21312965	NM_029312.1	1700010H22Rik		ILMN_2694983	001450632	S	704	ACCACGAAGAACAAATGTGTGTGGGTTTGCAAAAGTAAATACGATCAGGT										
Mus musculus	MEEBO	ILMN_216934	ILMN_216934	9030607L17RIK	scl0003925.1_2	NM_027829.1			21313647	NM_027829.1	9030607L17Rik		ILMN_1256705	005890681	S	327	ATCTACCAGTACGAGACCATCTCCTGCAGCAACTGCACGGACTCCCACGT										
Mus musculus	MEEBO	ILMN_218443	ILMN_218443	2700033K02RIK	scl0067192.1_182	NM_183261.1			34304041	NM_183261.1	2700033K02Rik		ILMN_2695912	003180546	S	845	CGCGGTTCCGGAAGGAGAGCGCTCTGTTAAGCTAGGAGAATCTCAAGGAG										
Mus musculus	RefSeq	ILMN_248975	ILMN_248975	ZNRF3	NM_001080924.1	NM_001080924.1		407821	124286865	NM_001080924.1	Znrf3	NP_001074393.1	ILMN_2837006	007210767	S	2848	TCATGCCCTGGCTGCTGAGGCTTCAGGACCAGGATCTGGCCCAGGCATCG	11	-	5179740-5179764:5180811-5180835	11qA1	Mus musculus zinc and ring finger 3 (Znrf3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA591877; Gm1167; BC019575	AA591877; Gm1167; BC019575
Mus musculus	RefSeq	ILMN_214546	ILMN_214546	NCF2	NM_010877.2	NM_010877.2		17970	31560561	NM_010877.2	Ncf2	NP_035007.1	ILMN_2887381	004810433	S	2454	CTGGATGCTAAGAAAAGCAAAACCCATCCCCAAGCCTACCCAGTTGTGGC	1	+	154599066-154599115	1qG3	Mus musculus neutrophil cytosolic factor 2 (Ncf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IDA]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence ISA]; The chemical reactions and pathways resulting in the breakdown of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; catabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6742] [evidence ISA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence ISA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IDA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence IPI]	Ncf-2; NOXA2; p67phox	Ncf-2; NOXA2; p67phox
Mus musculus	RefSeq	ILMN_200028	ILMN_200028	LOC383128	XM_356891.1	XM_356891.1			38079909	XM_356891.1	LOC383128		ILMN_1213492	004540670	S	65	CCACTGTGGCTGGAAGAGTGCTGCAGAAGGATGAAGAACAGGAGTCATGG										
Mus musculus	RefSeq	ILMN_187099	ILMN_310807	LOC100043969	XM_001472502.1	XM_001472502.1		100043969	149266186	XM_001472502.1	LOC100043969	XP_001472552.1	ILMN_2441164	004290747	S	29	TCCTGTGGCTCCAGTTAAACTGGGTGAACAGCCAGCAGAAGGTGCAGCAG	14	+	53371329-53371349:53371540-53371568		PREDICTED: Mus musculus similar to T cell receptor alpha (LOC100043969), mRNA.					
Mus musculus	RefSeq	ILMN_214278	ILMN_214278	GRHL1	NM_145890.1	NM_145890.1		195733	22094138	NM_145890.1	Grhl1	NP_665897.1	ILMN_1246419	006270327	S	2665	GGGCCGATTCTACAAGGCCATGTTTCAGAGCTTCCAAGCATCAGCTACCG	12	+	25301821-25301870	12qA1.3	Mus musculus grainyhead-like 1 (Drosophila) (Grhl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	MGR; Tcfcp2l2; LBP-32	MGR; Tcfcp2l2; LBP-32
Mus musculus	RefSeq	ILMN_214278	ILMN_214278	GRHL1	NM_145890.1	NM_145890.1		195733	22094138	NM_145890.1	Grhl1	NP_665897.1	ILMN_2727118	000150072	S	468	GGAACTCAGCCTTCGGATGCCGGGCATGAATTCAGAGGACTATGTCTTTG	12	+	25267764-25267813	12qA1.3	Mus musculus grainyhead-like 1 (Drosophila) (Grhl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	MGR; Tcfcp2l2; LBP-32	MGR; Tcfcp2l2; LBP-32
Mus musculus	Riken	ILMN_205210	ILMN_205210	D430023H11RIK	ri|D430023H11|PX00194E13|AK052441|2239					AK052441	D430023H11Rik		ILMN_1256387	006020671	S	2179	GAAGGACTGTGCTGTCTATGTTGGGCGGATGGAGAGAGTCGCACGTCATA										
Mus musculus	Riken	ILMN_203580	ILMN_203580	KCNQ5	ri|A230089O20|PX00129N18|AK039046|2101					AK039046	Kcnq5		ILMN_2558387	006770722	S	1930	AGCCTTAGAAGACCTCCAGAGAAAGCTGCAGGCACATACTGATTGATTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222506	ILMN_222506	OLFR1014	NM_146569.2	NM_146569.2		258562	121582636	NM_146569.2	Olfr1014	NP_666780.2	ILMN_2750594	000770605	S	405	GTCCTTAAAGCTATGTGCATTTTTAGTTGGAGTCTCATATTTGGGTGGTT	2	+	85617147-85617196	2qD	Mus musculus olfactory receptor 1014 (Olfr1014), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR213-5	MOR213-5
Mus musculus	RefSeq	ILMN_191567	ILMN_191567	V1RH18	NM_134241.1	NM_134241.1		171275	21717784	NM_134241.1	V1rh18	NP_599002.1	ILMN_1219757	003140445	S	837	TAGCCCCCTGGTGCTGATTCACAGGGATGGAGTTCTGACTGGATTTTGGC	13	-	22975144-22975193	13qA3.1	Mus musculus vomeronasal 1 receptor, H18 (V1rh18), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210859	ILMN_210859	OLFR488	NM_146732.1	NM_146732.1		258727	22380654	NM_146732.1	Olfr488	NP_666943.1	ILMN_2609910	006110601	S	421	ACACGATTCTGTATCCAGTTGGTTGTGGGATCTTATATAGGTGCATTTCT	7	-	115399180-115399229	7qE3	Mus musculus olfactory receptor 488 (Olfr488), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-15	MOR204-15
Mus musculus	RefSeq	ILMN_210859	ILMN_210859	OLFR488	NM_146732.1	NM_146732.1		258727	22380654	NM_146732.1	Olfr488	NP_666943.1	ILMN_2788571	006940520	S	870	CCTCATCTACAGCCTCAGGAATAATGAAATTAAGGGTGCTCTGAAGAAGC	7	-	115398731-115398780	7qE3	Mus musculus olfactory receptor 488 (Olfr488), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-15	MOR204-15
Mus musculus	Riken	ILMN_205867	ILMN_205867	SORCS2-PENDING	ri|C130019G06|PX00167B09|AK047881|2090					AK047881	Sorcs2-pending		ILMN_2575815	003990180	S	1625	GTGACTGTGACCTGGGACGGTAAGGCCGTTTCCCACAGAACACCCATGTG										
Mus musculus	RefSeq	ILMN_223088	ILMN_223088	GATA4	NM_008092.3	NM_008092.3		14463	110681730	NM_008092.3	Gata4	NP_032118.2	ILMN_2817903	000540091	S	3001	AAAGGACAAAGGTGATAGACGGGAGAAGATGTCCCCAGGGCTGGCGGGAC	14	-	63818094-63818143	14qD1	Mus musculus GATA binding protein 4 (Gata4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The process by which the anatomical structures of the foregut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48617] [evidence IMP]; The establishment, maintenance and elaboration of cell differentiation that results in the anterior/posterior subdivision of the embryonic heart tube. In Drosophila this results in subdivision of the dorsal vessel into to the posterior heart proper and the anterior aorta [goid 35054] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process by which the anatomical structures of the foregut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48617] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that increases or activates the frequency, rate, or extent of production of vascular endothelial growth factor [goid 10575] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IDA]; The process by which the anatomical structures of the gut are generated and organized during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48558] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases angiogenesis [goid 45766] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Gata-4	Gata-4
Mus musculus	RefSeq	ILMN_214764	ILMN_214764	PPP1R1B	NM_144828.1	NM_144828.1		19049	21536255	NM_144828.1	Ppp1r1b	NP_659077.1	ILMN_2954824	007200524	S	1609	TCTTCCCTTACTCTAGGCCTGAACCCCTCCTACGCTGTAATAAATCTTTG	11	+	98219052-98219101	11qD	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 1B (Ppp1r1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the receptiveness of a female to male advances [goid 7621] [evidence IDA]; Any process that stops, prevents or reduces the receptiveness of a female to male advances [goid 7621] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IMP]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence TAS];  [goid 4865] [evidence TAS]	AU040756; DARPP-32; Darpp32	AU040756; DARPP-32; Darpp32
Mus musculus	RefSeq	ILMN_214764	ILMN_214764	PPP1R1B	NM_144828.1	NM_144828.1		19049	21536255	NM_144828.1	Ppp1r1b	NP_659077.1	ILMN_2651660	005490379	S	1281	CTAAGATCTGGGGAAAGGAGGTACTGAGAGCCTACAGGTGCCCTGAGATC	11	+	98218724-98218773	11qD	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 1B (Ppp1r1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the receptiveness of a female to male advances [goid 7621] [evidence IDA]; Any process that stops, prevents or reduces the receptiveness of a female to male advances [goid 7621] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IMP]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence TAS];  [goid 4865] [evidence TAS]	AU040756; DARPP-32; Darpp32	AU040756; DARPP-32; Darpp32
Mus musculus	RefSeq	ILMN_214764	ILMN_214764	PPP1R1B	NM_144828.1	NM_144828.1		19049	21536255	NM_144828.1	Ppp1r1b	NP_659077.1	ILMN_1253473	002260072	S	16	AAGGCAGAGTGGGGGATAGACAGAAGCTGGTAGAGCAAGGCCGAGGGCAG	11	+	98210067-98210116	11qD	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 1B (Ppp1r1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the receptiveness of a female to male advances [goid 7621] [evidence IDA]; Any process that stops, prevents or reduces the receptiveness of a female to male advances [goid 7621] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IMP]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence TAS];  [goid 4865] [evidence TAS]	AU040756; DARPP-32; Darpp32	AU040756; DARPP-32; Darpp32
Mus musculus	RefSeq	ILMN_216455	ILMN_216455	C330019G07RIK	NM_194340.1	NM_194340.1		215476	34996496	NM_194340.1	C330019G07Rik	NP_919321.1	ILMN_1256807	001430014	S	5276	TCCCTCACATTCCTGCATGGTCACTTCCATCACGTCATCCAGATCTTTAC	5	-	33132297-33132346	5qB1	Mus musculus RIKEN cDNA C330019G07 gene (C330019G07Rik), mRNA.					
Mus musculus	Riken	ILMN_205644	ILMN_205644	TRPS1	ri|9830138H06|PX00118E23|AK036590|3446					AK036590	Trps1		ILMN_1226073	006100465	S	3252	GTTTCTGAAGCAGAGTGGATGGAACCTGGGAAGTGAGCTTCTCTCCAGCC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IPI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214783	ILMN_214783	MSH4	NM_031870.2	NM_031870.2		55993	118130744	NM_031870.2	Msh4	NP_114076.1	ILMN_2812016	003930279	S	2909	CAGGCCGCCCGAAACTCTCAGTTGGAGCCAGACAGGTTACGGACATACCT	3	-	153520479-153520528	3qH3	Mus musculus mutS homolog 4 (E. coli) (Msh4), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	mMsh4; AV144863; 4930485C04Rik	mMsh4; AV144863; 4930485C04Rik
Mus musculus	Riken	ILMN_204437	ILMN_204437	A730041D04RIK	ri|A730041D04|PX00150A24|AK042931|2196					AK042931	A730041D04Rik		ILMN_2564969	004890053	S	1868	CCTCTATGGTTTTGCATGTGCACTATGACTGCCTGGTGCCTCCACAAGCC										
Mus musculus	RefSeq	ILMN_245890	ILMN_245890	A630095E13RIK	NM_001033325.2	NM_001033325.2		235973	128485647	NM_001033325.2	A630095E13Rik	NP_001028497.1	ILMN_2881146	003400070	S	407	GCCACTGGAGCAGGTCATCAAGCCTTCTACTGAACCATATCTTTAGCTCC	9	-	36443501-36443550	9qA4	Mus musculus RIKEN cDNA A630095E13 gene (A630095E13Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Gm191; Sslp-1	Gm191; Sslp-1
Mus musculus	RefSeq	ILMN_199737	ILMN_199737	LOC382943	XM_356762.1	XM_356762.1			38076684	XM_356762.1	LOC382943		ILMN_2536302	000460392	S	274	ATACAGGTCTGTGAGCAGATATGGGTCAAAGCTGCAAAGAACAAGACTAG										
Mus musculus	Riken	ILMN_205720	ILMN_205720	9530001D23RIK	ri|9530001D23|PX00110J07|AK035206|3457					AK035206	9530001D23Rik		ILMN_1240558	003890577	S	3263	TGGGGCTTTGGGGACTGGAGCACTGTTTTTGGCAGAGGACCTGGTTCAGC										
Mus musculus	RefSeq	ILMN_189831	ILMN_189831	VPS33A	NM_029929.2	NM_029929.2		77573	31543949	NM_029929.2	Vps33a	NP_084205.2	ILMN_1222817	000270142	S	3163	GGAGAGTCAGGCGGTGTGGGGGGCATTCCCAAATGGGAAATCATTCTTAA	5	-	123979658-123979707	5qF	Mus musculus vacuolar protein sorting 33A (yeast) (Vps33a), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The process by which platelets bud from long processes extended by megakaryocytes [goid 30220] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence ISA]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IMP]		AW554476; bf; AW048546; 3830421M04Rik; AI503300	AW554476; bf; AW048546; 3830421M04Rik; AI503300
Mus musculus	RefSeq	ILMN_189831	ILMN_189831	VPS33A	NM_029929.2	NM_029929.2		77573	31543949	NM_029929.2	Vps33a	NP_084205.2	ILMN_2865558	002630619	S	3560	CATTATGCCCTGTGATGTAAGTCCCCTTAGTGCTCAAAGCTGCCTTTGTC	5	-	123979261-123979310	5qF	Mus musculus vacuolar protein sorting 33A (yeast) (Vps33a), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The process by which platelets bud from long processes extended by megakaryocytes [goid 30220] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence ISA]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IMP]		AW554476; bf; AW048546; 3830421M04Rik; AI503300	AW554476; bf; AW048546; 3830421M04Rik; AI503300
Mus musculus	RefSeq	ILMN_221999	ILMN_221999	INS1	NM_008386.3	NM_008386.3		16333	117606344	NM_008386.3	Ins1	NP_032412.3	ILMN_2743236	006590754	S	367	CAAGTGGAACAACTGGAGCTGGGAGGAAGCCCCGGGGACCTTCAGACCTT	19	+	52339297-52339346	19qD2	Mus musculus insulin I (Ins1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Ins2-rs1; Ins-1	Ins2-rs1; Ins-1
Mus musculus	Riken	ILMN_204256	ILMN_204256	AQP4	ri|A830087J22|PX00156K13|AK044074|926					AK044074	Aqp4		ILMN_1227682	000070301	S	684	GGGGAGTAGAGCAAGTCCAGCAGAGGCCTGATGCAAAAGATCTCACAGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]; Any process involved in the maintenance of an internal equilibrium of water within an organism or cell [goid 30104] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence IDA]		
Mus musculus	RefSeq	ILMN_195311	ILMN_233748	KAT2A	NM_001038010.1	NM_001038010.1		14534	83999996	NM_001038010.1	Kat2a	NP_001033099.1	ILMN_2652749	006900296	S	2337	CCCCATTGACCTGAAGACCATGACAGAACGGTTGCGCAGTCGCTACTATG	11	-	100566703-100566745:100566890-100566896	11qD	Mus musculus K(lysine) acetyltransferase 2A (Kat2a), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]	AW212720; 1110051E14Rik; Gcn5	AW212720; 1110051E14Rik; Gcn5
Mus musculus	MEEBO	ILMN_210314	ILMN_210314	9430034D17RIK	scl0077286.1_137	NM_029891.1			30794197	NM_029891.1	9430034D17Rik		ILMN_2773741	000050347	S	972	GATCAACTCAAACAGGAGGGCCAAGTGGGACATTATGAGCTTGTTATGCC										
Mus musculus	MEEBO	ILMN_190471	ILMN_190471	7530420F21RIK	scl00320019.1_154				51705253	XM_488915	7530420F21Rik		ILMN_1240419	003420711	S	1	GGTGGCCCTTAAAGAGATAGAGTGTTTTTCACAGTGCTGTATATTCCACC										
Mus musculus	MEEBO	ILMN_190471	ILMN_190471	7530420F21RIK	scl00320019.1_154				51705253	XM_488915	7530420F21Rik		ILMN_2737444	006580091	S	386	CAGGGACAGATGCTGAGCTCCACTTCATCGGAATGCTAAGTGTCCACAGC										
Mus musculus	RefSeq	ILMN_214927	ILMN_214927	OLFR262	NM_146688.1	NM_146688.1		258683	33239089	NM_146688.1	Olfr262	NP_666899.1	ILMN_2908906	006660681	S	527	AGCACTTCTTTTGTGACATGCCACAGTTGTTAGTTCTGTCCTGCACAGAC	19	-	12315573-12315622	19qA	Mus musculus olfactory receptor 262 (Olfr262), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR214-1; MOR214-9	MOR214-1; MOR214-9
Mus musculus	RefSeq	ILMN_214927	ILMN_214927	OLFR262	NM_146688.1	NM_146688.1		258683	33239089	NM_146688.1	Olfr262	NP_666899.1	ILMN_1231946	002230152	S	17	ACAGCACAGAGATCACCCAGTTCATCCTCTTGGGATTCACAGATTTACCC	19	-	12316083-12316132	19qA	Mus musculus olfactory receptor 262 (Olfr262), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR214-1; MOR214-9	MOR214-1; MOR214-9
Mus musculus	RefSeq	ILMN_214927	ILMN_214927	OLFR262	NM_146688.1	NM_146688.1		258683	33239089	NM_146688.1	Olfr262	NP_666899.1	ILMN_1258890	005220026	S	435	GGTGCTGGCATCCTATCTCTCTGGGCTCACTGCTTCTTTACTACAGTTGT	19	-	12315665-12315714	19qA	Mus musculus olfactory receptor 262 (Olfr262), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR214-1; MOR214-9	MOR214-1; MOR214-9
Mus musculus	MEEBO	ILMN_195573	ILMN_195573	4930563B10RIK	scl40429.1.1_284						4930563B10Rik		ILMN_2516801	001050202	S	13	CGTTTGCTCTGGACTAGATCTCCTGTATACTCCCAGTATACCCTTCAACC										
Mus musculus	RefSeq	ILMN_213846	ILMN_213846	EMR1	NM_010130.3	NM_010130.3		13733	145966879	NM_010130.3	Emr1	NP_034260.1	ILMN_2756353	007610372	S	455	TGGGATCTGCCCTAAGTATTCCAACTGCTCTAACTCTGTGGGAAGCTACA				17qD	Mus musculus EGF-like module containing, mucin-like, hormone receptor-like sequence 1 (Emr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Ly71; EGF-TM7; TM7LN3; Gpf480; F4/80; DD7A5-7	Ly71; EGF-TM7; TM7LN3; Gpf480; F4/80; DD7A5-7
Mus musculus	RefSeq	ILMN_213846	ILMN_213846	EMR1	NM_010130.3	NM_010130.3		13733	145966879	NM_010130.3	Emr1	NP_034260.1	ILMN_1216880	001030411	S	3110	CGGTACAAGAGATTACCATTTTTGTGTTTCCTATGCACTTTCTTGTGGTG				17qD	Mus musculus EGF-like module containing, mucin-like, hormone receptor-like sequence 1 (Emr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Ly71; EGF-TM7; TM7LN3; Gpf480; F4/80; DD7A5-7	Ly71; EGF-TM7; TM7LN3; Gpf480; F4/80; DD7A5-7
Mus musculus	RefSeq	ILMN_220995	ILMN_220995	KPNA4	NM_008467.4	NM_008467.4		16649	145966836	NM_008467.4	Kpna4	NP_032493.1	ILMN_2729656	004120133	S	3567	CTAGAGTATTTTTGCAGCATTCCTTGTCATCAAAAACATGGTTAAACTTT				3qE1	Mus musculus karyopherin (importin) alpha 4 (Kpna4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	IPOA3; 1110058D08Rik	IPOA3; 1110058D08Rik
Mus musculus	MEEBO	ILMN_187760	ILMN_187760	9626100_224	9626100_224						9626100_224		ILMN_1245887	001710136	S	17	ACCTTATTTGAACTAACCAATCAGTTCGCTTCTCGCTTCTGTTCGCGCGC										
Mus musculus	RefSeq	ILMN_223476	ILMN_223476	MAPKSP1	NM_019920.2	NM_019920.2		56692	118130521	NM_019920.2	Mapksp1	NP_064304.1	ILMN_1230008	000160382	S	944	TTTATTTCTTTGCATTGTGAGGAAGATGAAATGGCTTAGTAAAAATAATT	3	+	137591407-137591456	3qG3	Mus musculus MAPK scaffold protein 1 (Mapksp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19209] [evidence IDA]	MGC103121; Mapbp; AW556229; Mp1	MGC103121; Mapbp; AW556229; Mp1
Mus musculus	RefSeq	ILMN_229838	ILMN_229838	SPAG16	NM_029160.2	NM_029160.2		66722	70887604	NM_029160.2	Spag16	NP_083436.2	ILMN_3115326	002350639	A	1876	CCACCTGGGGGAAAATCTGTATTCTGGAGGCTCTGACGGCACCATTCGGT	1	+	70771456-70771505	1qC3	Mus musculus sperm associated antigen 16 (Spag16), transcript variant 1, mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of flagellar in eukaryotic cells and is responsible for their movements [goid 35086] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pf20; 4930524F24Rik; Wdr29; AV261009; 4921511D23Rik; 4930585K05Rik	Pf20; 4930524F24Rik; Wdr29; AV261009; 4921511D23Rik; 4930585K05Rik
Mus musculus	RefSeq	ILMN_187545	ILMN_229838	SPAG16	NM_029160.2	NM_029160.2		66722	70887604	NM_029160.2	Spag16	NP_083436.2	ILMN_2445040	007210735	S	1815	AATCGGGGCAAATTCACAAACTGGTGGGCCACGAGAGTGAAGTGCACAGT	1	+	70771395-70771444	1qC3	Mus musculus sperm associated antigen 16 (Spag16), transcript variant 1, mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of flagellar in eukaryotic cells and is responsible for their movements [goid 35086] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pf20; 4930524F24Rik; Wdr29; AV261009; 4921511D23Rik; 4930585K05Rik	Pf20; 4930524F24Rik; Wdr29; AV261009; 4921511D23Rik; 4930585K05Rik
Mus musculus	RefSeq	ILMN_229838	ILMN_229838	SPAG16	NM_029160.2	NM_029160.2		66722	70887604	NM_029160.2	Spag16	NP_083436.2	ILMN_3040591	002690471	I	558	GAACTCAGAAGGAACGGGACTTCCATCGCATGCATCATAAGCGCATAGTG	1	+	69916861-69916910	1qC3	Mus musculus sperm associated antigen 16 (Spag16), transcript variant 1, mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of flagellar in eukaryotic cells and is responsible for their movements [goid 35086] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pf20; 4930524F24Rik; Wdr29; AV261009; 4921511D23Rik; 4930585K05Rik	Pf20; 4930524F24Rik; Wdr29; AV261009; 4921511D23Rik; 4930585K05Rik
Mus musculus	RefSeq	ILMN_211315	ILMN_259398	ALKBH4	NM_028070.1	NM_028070.1		72041	110625893	NM_028070.1	Alkbh4	NP_082346.1	ILMN_1226152	001820441	S	1389	TGACAGTGTACTGGTGAGGTTTTAGGAGGAGCCATCTGACCCTTGACGTC	5	+	136617160-136617209	5qG2	Mus musculus alkB, alkylation repair homolog 4 (E. coli) (Alkbh4), mRNA. XM_925313 XM_925314 XM_925316 XM_979058 XM_979099 XM_979130			Hydroxylase, with 2-oxoglutarate as one donor, and incorporation or reduction of one atom each of oxygen into both donors [goid 10302] [evidence IDA]	Abj4; 2010004B12Rik	Abj4; 2010004B12Rik
Mus musculus	RefSeq	ILMN_219168	ILMN_219168	ST6GAL1	NM_145933.3	NM_145933.3		20440	62461607	NM_145933.3	St6gal1	NP_666045.1	ILMN_2705166	001430368	S	4298	GTGGGCACTGACGTCACTAGCCATCTATGCATCCTAAATGCAGGATCCTC	16	+	23360235-23360284	16qB1	Mus musculus beta galactoside alpha 2,6 sialyltransferase 1 (St6gal1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-acetyl-beta-D-glucosamine = CMP + alpha-N-acetylneuraminyl-2,6-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosamine [goid 3835] [evidence IEA]	ST6Gal; Cd75; ST6Gal I; AW742324; Siat1; St6Gal-I; MGC116663	ST6Gal; Cd75; ST6Gal I; AW742324; Siat1; St6Gal-I; MGC116663
Mus musculus	RefSeq	ILMN_196838	ILMN_219168	ST6GAL1	NM_145933.3	NM_145933.3		20440	62461607	NM_145933.3	St6gal1	NP_666045.1	ILMN_2525980	006350494	S	730	GGATTAGCCAGAAGCAGGCTTGGTTCCTGCTCCGATCAGTGGCTCTCCTG	16	+	23317755-23317771:23321106-23321138	16qB1	Mus musculus beta galactoside alpha 2,6 sialyltransferase 1 (St6gal1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-acetyl-beta-D-glucosamine = CMP + alpha-N-acetylneuraminyl-2,6-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosamine [goid 3835] [evidence IEA]	ST6Gal; Cd75; ST6Gal I; AW742324; Siat1; St6Gal-I; MGC116663	ST6Gal; Cd75; ST6Gal I; AW742324; Siat1; St6Gal-I; MGC116663
Mus musculus	Riken	ILMN_204606	ILMN_204606	5330403J18RIK	ri|5330403J18|PX00053E09|AK030367|2647					AK030367	5330403J18Rik		ILMN_2566272	005960500	S	2500	GCTAGACATGAGCTCTTCCTGCCAGCCCAGGGCATCTCAGTTAGCTTATG										
Mus musculus	RefSeq	ILMN_201378	ILMN_201378	LOC385064	XM_358028.1	XM_358028.1			38093414	XM_358028.1	LOC385064		ILMN_2542090	003060280	S	67	CTGATGCTGAAGCACCAGTGCACCTGCGGGAGTAGCAGCAGCCACCCCGA										
Mus musculus	RefSeq	ILMN_217349	ILMN_257911	SEPP1	NM_001042613.1	NM_001042613.1		20363	110735407	NM_001042613.1	Sepp1	NP_001036078.1	ILMN_1247553	000380133	S	1904	CCTATGAACCTGACCTCTTTTATGGCTAATACGACTAAGCAAGAATGGAG	15	+	3230399-3230448	15qA1	Mus musculus selenoprotein P, plasma, 1 (Sepp1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving the nonmetallic element selenium or compounds that contain selenium, such as selenocysteine [goid 1887] [evidence IDA]; The chemical reactions and pathways involving the nonmetallic element selenium or compounds that contain selenium, such as selenocysteine [goid 1887] [evidence IMP]	Interacting selectively with selenium (Se) [goid 8430] [evidence IDA]	AU018766; D15Ucla1; Se-P; selp	AU018766; D15Ucla1; Se-P; selp
Mus musculus	RefSeq	ILMN_239982	ILMN_239982	LY6E	NM_008529.2	NM_008529.2		17069	31982210	NM_008529.2	Ly6e	NP_032555.1	ILMN_2984828	006550376	S	922	ACAGCAGAAGGCCTGTGTTGCCACCAAAACCCCTCCCCCTGGTATCATTG	15	+	74789564-74789613	15qD3	Mus musculus lymphocyte antigen 6 complex, locus E (Ly6e), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The regulated release of epinephrine by a cell or group of cells. Epinephrine is a catecholamine hormone secreted by the adrenal medulla and a neurotransmitter, released by certain neurons and active in the central nervous system [goid 48242] [evidence IMP]; The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42415] [evidence IMP]		Ly67; 9804; TSA-1; RIG-E; Sca-2; Tsa1	Ly67; 9804; TSA-1; RIG-E; Sca-2; Tsa1
Mus musculus	RefSeq	ILMN_221978	ILMN_221978	OLFR1507	NM_020512.1	NM_020512.1		57269	10048447	NM_020512.1	Olfr1507	NP_065258.1	ILMN_1232871	001740162	S	813	CAAGATTGTATCTGCATTTTTCACGGCCATAACCCCTCTGCTGAACCCCA	14	-	53117972-53118021	14qC2	Mus musculus olfactory receptor 1507 (Olfr1507), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Or28; MOR244-1; Mor28	Or28; MOR244-1; Mor28
Mus musculus	RefSeq	ILMN_243297	ILMN_243297	BC023744	NM_001033311.1	NM_001033311.1		231668	85701813	NM_001033311.1	BC023744	NP_001028483.1	ILMN_3160492	006350356	S	1270	ATGCCCGCCTCAGGGTCTTTATCTCAGCAGACACTGGCTGTGTGCCTGTG	5	+	117599657-117599706	5qF	Mus musculus cDNA sequence BC023744 (BC023744), mRNA. XM_923702					
Mus musculus	RefSeq	ILMN_222403	ILMN_222403	OLFR523	NM_146518.1	NM_146518.1		258511	33239353	NM_146518.1	Olfr523	NP_666729.1	ILMN_1251687	005220315	S	779	GGTATGGCTCTACTATCTTCTTGCACGTGAGGACCTCGGTAGAGAGCTCC	7	+	147362781-147362830	7qF4	Mus musculus olfactory receptor 523 (Olfr523), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISO]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISO]	MOR104-4	MOR104-4
Mus musculus	Riken	ILMN_202731	ILMN_202731	C330019M07RIK	ri|C330019M07|PX00076I22|AK021211|866					AK021211	C330019M07Rik		ILMN_1252173	006270747	S	798	GTGTGCTACAGGGCCTGCCTGGGTCTCACTGCTCAGCTCTGTTGAAAATA										
Mus musculus	RefSeq	ILMN_223678	ILMN_223678	SRFBP1	NM_026040.2	NM_026040.2		67222	40254500	NM_026040.2	Srfbp1	NP_080316.2	ILMN_2815383	005560139	S	1689	GCCCGATGGCCTGAGTTTGACCCCTGTGATTCCCTTGGTATGAGGGCAGA	18	+	52650641-52650690	18qD1	Mus musculus serum response factor binding protein 1 (Srfbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p49/STRAP; 2810036K01Rik	p49/STRAP; 2810036K01Rik
Mus musculus	RefSeq	ILMN_223678	ILMN_223678	SRFBP1	NM_026040.2	NM_026040.2		67222	40254500	NM_026040.2	Srfbp1	NP_080316.2	ILMN_1242900	002320687	S	1341	GCTGCCTCTTTGCAAGCGTTCTGTCAAAATTTTTGGTTTTGTTTTTAACT	18	+	52650293-52650342	18qD1	Mus musculus serum response factor binding protein 1 (Srfbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p49/STRAP; 2810036K01Rik	p49/STRAP; 2810036K01Rik
Mus musculus	Riken	ILMN_204469	ILMN_204469	B130005N20RIK	ri|B130005N20|PX00157G21|AK044821|3196					AK044821	B130005N20Rik		ILMN_2565218	002810240	S	2897	GCCAGCGAGATGGCTCGGTAGGTAGAAGCACTTGTACAAGCCTGACAAGC										
Mus musculus	RefSeq	ILMN_229767	ILMN_229767	4922505E12RIK	NM_001033547.2	NM_001033547.2		433386	113680843	NM_001033547.2	4922505E12Rik	NP_001028719.1	ILMN_2825496	002260682	S	1828	TCAGAAGGGTCCCGCGTCCTCCAAGATAAACCGCTGCTTTGACCAGGTGG	1	-	184677434-184677483	1qH5	Mus musculus RIKEN cDNA 4922505E12 gene (4922505E12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194754	ILMN_327730	LOC100038926	XM_001471645.1	XM_001471645.1		100038926	149258506	XM_001471645.1	LOC100038926	XP_001471695.1	ILMN_1244005	005050044	S	213	GAACAAGAGGCTGCAAAAGAAGAGAACGCATGAATGGGACCTGCAGAAAG	8	+	22195518-22195567	8qA2	PREDICTED: Mus musculus hypothetical protein LOC100038926 (LOC100038926), mRNA.					
Mus musculus	Riken	ILMN_204651	ILMN_204651	8030448M07RIK	ri|8030448M07|PX00103J05|AK033160|3512					AK033160	8030448M07Rik		ILMN_2566616	001470156	S	3114	CAGAGCCATGGTTTCACTTTAGCGCCTTGTGCTTTATGTGTAACATACCT										
Mus musculus	RefSeq	ILMN_217316	ILMN_217316	OTTMUSG00000005065	NM_177799.3	NM_177799.3		327860	142367027	NM_177799.3	OTTMUSG00000005065	NP_808467.1	ILMN_1243257	000610246	S	954	CCGCCTTCTGCGCCTCCTTTGGGATAAGATTGTTGGTCACTTGCCCAGAT	11	-	4520593-4520642	11qA1	Mus musculus predicted gene, OTTMUSG00000005065 (OTTMUSG00000005065), mRNA.				RP23-280J3.2	RP23-280J3.2
Mus musculus	RefSeq	ILMN_250102	ILMN_250102	ZFP85-RS1	NM_001001130.2	NM_001001130.2		22746	133892769	NM_001001130.2	Zfp85-rs1	NP_001001130.1	ILMN_3161206	002140735	S	1469	CTAGAGAAAACCCAGACTAGCTCAACCATGTCGCAAAGTCTTCCATAATC	13	-	67849436-67849466:67849467-67849485	13qB3	Mus musculus zinc finger protein 85, related sequence 1 (Zfp85-rs1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rslcan2; KRAB19; Zfp71	Rslcan2; KRAB19; Zfp71
Mus musculus	Riken	ILMN_204133	ILMN_204133	B230307C02RIK	ri|B230307C02|PX00159E12|AK045711|2013					AK045711	B230307C02Rik		ILMN_1229146	003460403	S	1591	AGGGCAGTTTCTGAAGGGAGCTTGATACCTGAGGGCCACTTGCCGGTAGC										
Mus musculus	RefSeq	ILMN_199696	ILMN_199696	LOC383828	XM_357281.1	XM_357281.1			38076201	XM_357281.1	LOC383828		ILMN_1221717	002060528	S	349	GGGGGGAGTGGACTTTATCCTTTGGAGGAGCTAGAAGCACTGAACCTCGA										
Mus musculus	Riken	ILMN_206251	ILMN_206251	LOXL2	ri|C130085L24|PX00172M24|AK081898|2776					AK081898	Loxl2		ILMN_2578719	003520427	S	2375	CTGGGCAAACACCCTACTGACTAAGCTAGACCCCAGCCAAGACACTGGCT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + H2O2 [goid 4720] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192032	ILMN_192032	ZFP637	NM_177684.2	NM_177684.2		232337	31343306	NM_177684.2	Zfp637	NP_808352.1	ILMN_2949275	005090288	S	880	GCACCAGCGAAGCTGCTCACAACGGCTCACTCTGTAAACACCCCTCAAAG	6	+	117795755-117795791:117795792-117795804	6qF1	Mus musculus zinc finger protein 637 (Zfp637), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	BC021601; MGC54806	BC021601; MGC54806
Mus musculus	MEEBO	ILMN_195593	ILMN_195593	IGHV1S114_L33955_IG_HEAVY_VARIABLE_1S114_205	IGHV1S114_L33955_Ig_heavy_variable_1S114_205						IGHV1S114_L33955_Ig_heavy_variable_1S114_205		ILMN_2516963	000770377	S	20	TAGTACTAGCTACAACCAGAAGTTCAAGGGAAAGGCCACATTGACTGTAG										
Mus musculus	RefSeq	ILMN_222219	ILMN_236937	GNG2	NM_001038637.1	NM_001038637.1		14702	84490420	NM_001038637.1	Gng2	NP_001033726.1	ILMN_1214150	004260215	S	629	GACCCTGCAGACCGGCCTGGAGGAGGGAAATGTATAAAAAATGAGAATGG	14	-	20694780-20694829	14qA3	Mus musculus guanine nucleotide binding protein (G protein), gamma 2 (Gng2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	1110003P13Rik; 82	1110003P13Rik; 82
Mus musculus	RefSeq	ILMN_236937	ILMN_236937	GNG2	NM_001038637.1	NM_001038637.1		14702	84490420	NM_001038637.1	Gng2	NP_001033726.1	ILMN_3143604	003180019	A	3533	TTCCCCTGTCTCTGACTCGAGAATAAAGGCATGAGCCACCACACCCAGCT	14	-	20691876-20691925	14qA3	Mus musculus guanine nucleotide binding protein (G protein), gamma 2 (Gng2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	1110003P13Rik; 82	1110003P13Rik; 82
Mus musculus	RefSeq	ILMN_215784	ILMN_215784	BC050777	NM_183181.1	NM_183181.1		241850	34147235	NM_183181.1	BC050777	NP_899004.1	ILMN_1239850	002350424	S	1601	ACAGAAAAGCTGGCCGTGCTGGGGATCTTGGTGTCTGGGAGAGTAGGCAG	2	+	181229515-181229564	2qH4	Mus musculus cDNA sequence BC050777 (BC050777), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RP23-33L3.1; 1700095H12	RP23-33L3.1; 1700095H12
Mus musculus	RefSeq	ILMN_207529	ILMN_207529	ZFP294	XM_358881.1	XM_358881.1			38081382	XM_358881.1	Zfp294		ILMN_1260535	001850400	I	2383	GCATGGTGTGGGGTGGACTGACAAGGGTCTCTCTCTTTCCTACTCAGCAG								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_202346	ILMN_202346	4930417G10RIK	ri|4930417G10|PX00030A14|AK015158|1110					AK015158	4930417G10Rik		ILMN_1255040	001050682	S	833	GAATAAGAAGGGAGCAGCATGGAGAAGGGGTGTGGTCAACTGCTGGTGGC										
Mus musculus	RefSeq	ILMN_246642	ILMN_246642	TIMELESS	NM_011589.1	NM_011589.1		21853	6755788	NM_011589.1	Timeless	NP_035719.1	ILMN_3024456	001410450	I	1894	CAGTGGAGGAGCAGCGGGTAGAAGCCATGGTGAGGATCCAAGACTGCCTT	10	+	127683431-127683480	10qD3	Mus musculus timeless homolog (Drosophila) (Timeless), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [pmid 10963667] [evidence IEP]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [pmid 10231394] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	tim; C77407; Debt69	tim; C77407; Debt69
Mus musculus	RefSeq	ILMN_246642	ILMN_246642	TIMELESS	NM_011589.1	NM_011589.1		21853	6755788	NM_011589.1	Timeless	NP_035719.1	ILMN_3097131	000160703	A	4283	CCCATCGTGTGGGAGACAGAGGCAAGAGAATTGCCATGAGGGAGAGGAAA	10	+	127689878-127689927	10qD3	Mus musculus timeless homolog (Drosophila) (Timeless), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [pmid 10963667] [evidence IEP]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [pmid 10231394] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	tim; C77407; Debt69	tim; C77407; Debt69
Mus musculus	RefSeq	ILMN_233316	ILMN_233316	SIRPB1	NM_001002898.1	NM_001002898.1		320832	50872162	NM_001002898.1	Sirpb1	NP_001002898.1	ILMN_3154691	005090491	A	1	AACAGGGTTCTTAACACCAACCATGCTTCTCCTAGATGCCTGGACCCACA	3	-	15426377-15426405:15426406-15426426	3qA1	Mus musculus signal-regulatory protein beta 1 (Sirpb1), transcript variant 3, mRNA.				SIRP-beta; 9930027N05Rik; Sirpb	SIRP-beta; 9930027N05Rik; Sirpb
Mus musculus	RefSeq	ILMN_209500	ILMN_209500	GRASP	NM_019518.3	NM_019518.3		56149	103472018	NM_019518.3	Grasp	NP_062391.3	ILMN_2656031	007160750	S	471	CAGCGTGTAGAGATGGTGACCTTCGTCTGCCGAGTTCATGAATCCAGCCC	15	+	101059449-101059498	15qF2	Mus musculus GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein (Grasp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence ISO]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IPI]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	tamalin	tamalin
Mus musculus	MEEBO	ILMN_221762	ILMN_221762	4930534B04RIK	scl071387.1_60	NM_181815.1			32451495	NM_181815.1	4930534B04Rik		ILMN_2739989	003370095	S	1580	ACGCTGGCCGCACAGATCGAGGTGACAGCCGACCTTTAATCTCCGTTTGA										
Mus musculus	RefSeq	ILMN_198678	ILMN_322216	LOC622901	XR_031732.1	XR_031732.1		622901	149272307	XR_031732.1	LOC622901		ILMN_1253198	001030156	S	1760	TAGCTGGACAGTCAACATGGAGCAGATCATGAAGGCCCTGGCACTGTGAA				XqF2	PREDICTED: Mus musculus similar to heat shock protein 1, beta (LOC622901), misc RNA.					
Mus musculus	RefSeq	ILMN_219049	ILMN_219049	PNPT1	NM_027869.1	NM_027869.1		71701	25188203	NM_027869.1	Pnpt1	NP_082145.1	ILMN_3080159	002710411	I	2600	ATTGTAAACTATTGAAAAATAATAGATCATGTATACCTCCCTAAGGATCT	11	+	29061724-29061773	11qA3.3	Mus musculus polyribonucleotide nucleotidyltransferase 1 (Pnpt1), mRNA. XM_918766 XM_918777	The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PNPase; Old35; 1200003F12Rik; RP23-313I4.2; Pnptl1	PNPase; Old35; 1200003F12Rik; RP23-313I4.2; Pnptl1
Mus musculus	RefSeq	ILMN_219049	ILMN_219049	PNPT1	NM_027869.1	NM_027869.1		71701	25188203	NM_027869.1	Pnpt1	NP_082145.1	ILMN_2703544	000010372	S	2462	TTAAAATGATCATGTGCCTTTTTTATTTCAGGAGCAACCTATATTTGCTT	11	+	29061586-29061635	11qA3.3	Mus musculus polyribonucleotide nucleotidyltransferase 1 (Pnpt1), mRNA. XM_918766 XM_918777	The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PNPase; Old35; 1200003F12Rik; RP23-313I4.2; Pnptl1	PNPase; Old35; 1200003F12Rik; RP23-313I4.2; Pnptl1
Mus musculus	MEEBO	ILMN_190945	ILMN_190945	4933411D12RIK	scl34058.1.1_81						4933411D12Rik		ILMN_2474666	002470113	S	2	CTGTTGGACATCCTGGTCCCATCAGTCACCAGCTGTAGAAGGTCCTTTGT										
Mus musculus	RefSeq	ILMN_237017	ILMN_237017	MYO10	NM_019472.1	NM_019472.1		17909	9506908	NM_019472.1	Myo10	NP_062345.1	ILMN_2823011	001470035	S	6081	GTATGAGCACATCCTCTCGTTCGGGGCACCGCTGGCCAACACGTACAAGA	15	+	25755185-25755234	15qB1	Mus musculus myosin X (Myo10), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	mKIAA0799; D15Ertd600e; AW048724	mKIAA0799; D15Ertd600e; AW048724
Mus musculus	RefSeq	ILMN_217693	ILMN_217693	MSI1	NM_008629.1	NM_008629.1		17690	6678939	NM_008629.1	Msi1	NP_032655.1	ILMN_1231287	006590491	S	1396	TATTTTTGGATTAGCCAGTTGCCCTACCCCCACACCAGATCTGCCCTCTC	5	+	115904056-115904105	5qF	Mus musculus Musashi homolog 1(Drosophila) (Msi1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with single-stranded RNA [goid 3727] [evidence IDA]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [evidence IDA]	Musahi1; Msi1h; m-Msi-1	Musahi1; Msi1h; m-Msi-1
Mus musculus	RefSeq	ILMN_223995	ILMN_228999	TSPAN15	NM_197996.2	NM_197996.2		70423	110347497	NM_197996.2	Tspan15	NP_932113.2	ILMN_2772821	005550373	S	1159	ACTCCTCCTAGGGGAAAGCTGAACCCTGTGGGATCCCGGGAACAGGGATA	10	-	61650540-61650589	10qB4	Mus musculus tetraspanin 15 (Tspan15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2700063A19Rik; 1110036D12Rik; AW048364; Tm4sf15	2700063A19Rik; 1110036D12Rik; AW048364; Tm4sf15
Mus musculus	Riken	ILMN_204147	ILMN_204147	C730004I03RIK	ri|C730004I03|PX00086I18|AK050029|1504					AK050029	C730004I03Rik		ILMN_1226684	006550575	S	1406	TGCCCCGTTCTGCCGATTGGCGTTCTTGTTTTTATTGTGGACGGACCTAG										
Mus musculus	RefSeq	ILMN_198282	ILMN_225376	PRDM6	NM_001033281.3	NM_001033281.3		225518	146198827	NM_001033281.3	Prdm6	NP_001028453.1	ILMN_1233994	004010338	S	1759	GCCCAATGAGTGCAAGCCGATAACCGAGAGCCCGGAATCAATCGAAGTGG				18qD1	Mus musculus PR domain containing 6 (Prdm6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle cell differentiation [goid 51151] [evidence IMP]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	PRISM; Gm92	PRISM; Gm92
Mus musculus	RefSeq	ILMN_200915	ILMN_200915	LOC386489	XM_109543.4	XM_109543.4			38087013	XM_109543.4	LOC386489		ILMN_1245539	003840170	S	672	GGCTCCAGCTGATTCGGCTCAAGGCAAGTGTTTCCAAATATTAGAAGGAC										
Mus musculus	RefSeq	ILMN_209760	ILMN_209760	9530066K23RIK	NM_172524.1	NM_172524.1		214112	27369725	NM_172524.1	9530066K23Rik	NP_766112.1	ILMN_2844642	001030037	S	3051	GCCCTCCTGTGTCTTCCAAGATCTGCCCTCACTCAAACAGGGAAGGTTGC	11	-	45991772-45991821	11qB1.1	Mus musculus RIKEN cDNA 9530066K23 gene (9530066K23Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	RP23-29H5.5	RP23-29H5.5
Mus musculus	RefSeq	ILMN_220462	ILMN_220462	SLC25A45	NM_134154.3	NM_134154.3		107375	146149102	NM_134154.3	Slc25a45	NP_598915.1	ILMN_1251109	005870561	S	1674	CTCCTGCCTACCTCAGTCATACCTCTGTGTGCAGTGCTTCATGGTTAGTT				19qA	Mus musculus solute carrier family 25, member 45 (Slc25a45), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW491445	AW491445
Mus musculus	MEEBO	ILMN_195504	ILMN_195504	3110018I06RIK	scl42801.1.2_274						3110018I06Rik		ILMN_2516168	001990215	S	20	AAGAATAAAATTTGGGGACCAAAATTATACCCATCGGGATTGCCTCTGTA										
Mus musculus	RefSeq	ILMN_191267	ILMN_245190	NDUFA10	NM_024197.1	NM_024197.1		67273	13195623	NM_024197.1	Ndufa10	NP_077159.1	ILMN_2657946	000770221	S	1118	GCCATGGAGATGCCTGCTCTGCCCAACTCTGTGAACTCCAGAGCTTTCCA	1	-	94336337-94336386	1qD	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 (Ndufa10), nuclear gene encoding mitochondrial protein, mRNA.	The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	2900053E13Rik	2900053E13Rik
Mus musculus	RefSeq	ILMN_196518	ILMN_196518	AI448196	XM_136041.3	XM_136041.3			38087316	XM_136041.3	AI448196		ILMN_1246006	004060022	S	6179	GTGCCAAGAAACTTAGAGCCTTAGCAGCAGATTGTAGTGACCCAGAGGTG										
Mus musculus	RefSeq	ILMN_198426	ILMN_211403	C1R	NM_023143.2	NM_023143.2		50909	62990159	NM_023143.2	C1r	NP_075632.2	ILMN_1218434	001770131	S	139	CAGCCATTCCCCAAATGGACCACCAGATGGCACCAGCAAGCAACGAGGAT	6	+	124462561-124462610	6qF2	Mus musculus complement component 1, r subcomponent (C1r), mRNA.		Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	C1rb; AI132558	C1rb; AI132558
Mus musculus	RefSeq	ILMN_211403	ILMN_211403	C1R	NM_023143.2	NM_023143.2		50909	62990159	NM_023143.2	C1r	NP_075632.2	ILMN_2770475	003870184	S	2604	CATATAAAAATCAAAGATGCAGAACGTGTATAGAATAAACTCTCTTTTCT	6	+	124473084-124473133	6qF2	Mus musculus complement component 1, r subcomponent (C1r), mRNA.		Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	C1rb; AI132558	C1rb; AI132558
Mus musculus	RefSeq	ILMN_196495	ILMN_229399	EIF1AD	NM_027236.2	NM_027236.2		69860	133893041	NM_027236.2	Eif1ad	NP_081512.1	ILMN_2683916	007000468	S	1154	GCCCCTTTCTGAACTGACCTAAAAGAATTAAACCCCTGGTGGGTGATGAC	19	+	5370196-5370245	19qA	Mus musculus eukaryotic translation initiation factor 1A domain containing (Eif1ad), mRNA.		The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	AI131644	AI131644
Mus musculus	RefSeq	ILMN_196495	ILMN_229399	EIF1AD	NM_027236.2	NM_027236.2		69860	133893041	NM_027236.2	Eif1ad	NP_081512.1	ILMN_1237895	004730021	S	625	GGACTCCTGGGAACAATCTGCATGAGGTGGAAACAGCACAGGGGCAGCGC	19	+	5368429-5368478	19qA	Mus musculus eukaryotic translation initiation factor 1A domain containing (Eif1ad), mRNA.		The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	AI131644	AI131644
Mus musculus	RefSeq	ILMN_216492	ILMN_216492	SNX8	NM_172277.2	NM_172277.2		231834	142375675	NM_172277.2	Snx8	NP_758481.1	ILMN_2671671	000060544	S	2528	GCTATGGGATTCGGCTCGATGAATGAAGCACTTTATGGACTGCGGGGATC	5	-	140816291-140816340	5qG2	Mus musculus sorting nexin 8 (Snx8), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	B130023O14Rik	B130023O14Rik
Mus musculus	RefSeq	ILMN_192383	ILMN_240735	PRPF40A	NM_018785.2	NM_018785.2		56194	118130745	NM_018785.2	Prpf40a	NP_061255.1	ILMN_2760043	006330070	S	3272	GTGCACTACTGAACTGGTTAAAGCCAATGTGATCTTCTGTGGTGAGCTCT	2	-	52997752-52997801	2qC1.1	Mus musculus PRP40 pre-mRNA processing factor 40 homolog A (yeast) (Prpf40a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FBP11; Fnbp11; Fnbp3; 2810012K09Rik	FBP11; Fnbp11; Fnbp3; 2810012K09Rik
Mus musculus	RefSeq	ILMN_192383	ILMN_240735	PRPF40A	NM_018785.2	NM_018785.2		56194	118130745	NM_018785.2	Prpf40a	NP_061255.1	ILMN_2642806	000990431	S	1030	ATTCAAGATCTCAGTGGTGATATATCCAGTAACACTGGAGAGGAACCAGC	2	-	53015677-53015726	2qC1.1	Mus musculus PRP40 pre-mRNA processing factor 40 homolog A (yeast) (Prpf40a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FBP11; Fnbp11; Fnbp3; 2810012K09Rik	FBP11; Fnbp11; Fnbp3; 2810012K09Rik
Mus musculus	RefSeq	ILMN_212887	ILMN_212887	RAVER1	NM_027911.3	NM_027911.3		71766	91064853	NM_027911.3	Raver1	NP_082187.1	ILMN_1216883	004900184	S	2260	GGGTCGACACCAGAGATGCTCCAAGGGCCTGCACCAAGTTGCTTTTGGGT	9	-	20879742-20879791	9qA3	Mus musculus ribonucleoprotein, PTB-binding 1 (Raver1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	1300006N24Rik; KIAA1978; MGC118403; mKIAA1978	1300006N24Rik; KIAA1978; MGC118403; mKIAA1978
Mus musculus	RefSeq	ILMN_209808	ILMN_209808	TLE1	NM_011599.2	NM_011599.2		21885	31543869	NM_011599.2	Tle1	NP_035729.2	ILMN_2965577	006650746	S	4232	CCAAACCATTATTGTAGGAAGGCCCAGTCTTATCTACATTCTTTCTCTTG	4	-	71603528-71603577	4qC3	Mus musculus transducin-like enhancer of split 1, homolog of Drosophila E(spl) (Tle1), mRNA. XM_984202 XM_984240 XM_984277 XM_984316 XM_984359 XM_984397 XM_984426 XM_984456 XM_984492 XM_984530	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	C230057C06Rik; Grg1	C230057C06Rik; Grg1
Mus musculus	MEEBO	ILMN_195772	ILMN_195772	MKIAA0756	scl000780.1_120				37360077	AK129207	mKIAA0756		ILMN_1238983	002900475	S	19	GTGGTGGTCAATGGGAGAGGTGACGGGCCTCGAAGTGAAACCAAGGAATT										
Mus musculus	MEEBO	ILMN_222497	ILMN_222497	D530031C13RIK	scl43422.10.1_140	NM_177269.2			31343210	NM_177269.2	D530031C13Rik		ILMN_1223480	003400039	S	1589	TGACCAGTATTAACACTTTCACATATGTTTTGTATCCTCAAAACCTGGGC										
Mus musculus	RefSeq	ILMN_221036	ILMN_221036	C8A	NM_146148.1	NM_146148.1		230558	22122666	NM_146148.1	C8a	NP_666260.1	ILMN_1213805	004810402	S	3429	GAAATCCAGCCTGATGCAAAACCTGACAGTGAGAAAGAACGTGGGGACTG	4	-	104488425-104488474	4qC6	Mus musculus complement component 8, alpha polypeptide (C8a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow [goid 5579] [evidence ISO]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway [goid 6956] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC29381	MGC29381
Mus musculus	RefSeq	ILMN_213908	ILMN_213908	NUDT5	NM_016918.3	NM_016918.3		53893	142387406	NM_016918.3	Nudt5	NP_058614.1	ILMN_1213725	004610364	S	980	GGTCTACGCCTACGGTCTGGCTCTGAAACACGCCAACTCGAAGCCATTCG	2	+	5789172-5789221	2qA1	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 5 (Nudt5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ADP-ribose + H2O = AMP + D-ribose 5-phosphate [goid 47631] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IDA]		
Mus musculus	RefSeq	ILMN_219889	ILMN_219889	A230079K17RIK	NM_172846.1	NM_172846.1		240960	27370275	NM_172846.1	A230079K17Rik	NP_766434.1	ILMN_1218082	006510523	S	1634	GAGGGCAATGCTAAAGAAGGATGTTTGCCAGAAAAGAGGGCAATATTACA	1	+	183600554-183600603	1qH5	Mus musculus RIKEN cDNA A230079K17 gene (A230079K17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219355	ILMN_219355	CCDC46	NM_029606.3	NM_029606.3		76380	125661051	NM_029606.3	Ccdc46	NP_083882.3	ILMN_3034257	002260301	I	2193	GCTGGAGCATGAACAGGAGAAGACGCACCTATTACAGCAGCACAGCGCAG	11	+	108467541-108467590	11qE1	Mus musculus coiled-coil domain containing 46 (Ccdc46), transcript variant 2, mRNA.				AV207351; 8430407H02Rik; 1700001M19Rik; AV043680; 1700029K01Rik	AV207351; 8430407H02Rik; 1700001M19Rik; AV043680; 1700029K01Rik
Mus musculus	RefSeq	ILMN_219355	ILMN_219355	CCDC46	NM_029606.3	NM_029606.3		76380	125661051	NM_029606.3	Ccdc46	NP_083882.3	ILMN_3107945	005560112	A	3324	GGGAGGAGATGTCTGCTTGTGGTGTGCCTTGGTGATGCTTTGCAAGGGTC	11	+	108721767-108721816	11qE1	Mus musculus coiled-coil domain containing 46 (Ccdc46), transcript variant 2, mRNA.				AV207351; 8430407H02Rik; 1700001M19Rik; AV043680; 1700029K01Rik	AV207351; 8430407H02Rik; 1700001M19Rik; AV043680; 1700029K01Rik
Mus musculus	MEEBO	ILMN_192937	ILMN_192937	MKIAA0515	scl0003362.1_10				28972256	AK122300	mKIAA0515		ILMN_2492728	004230731	S	18	GCCCTCTGGATCAGCAGTTAACATGGGCTCTGTGCAGGGACACTACGTTC										
Mus musculus	Riken	ILMN_203597	ILMN_203597	A430104D08RIK	ri|A430104D08|PX00064E08|AK040509|4086					AK040509	A430104D08Rik		ILMN_2558520	005900221	S	3823	GACCTCACGTTGGTAAGGGAGGAGAGTTAGGACATTGCTGATGTGGTCAG										
Mus musculus	RefSeq	ILMN_261943	ILMN_261943	TMED8	NM_001033475.1	NM_001033475.1		382620	84794626	NM_001033475.1	Tmed8	NP_001028647.1	ILMN_2979248	005310437	S	6579	GAAGGCGGGGAGGTGCTTGGAGATTTCCTAAACCACGCTATGCCATTTGC	12	-	88055895-88055944	12qD2	Mus musculus transmembrane emp24 domain containing 8 (Tmed8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		6430595O10Rik; Gm1184; AI447224	6430595O10Rik; Gm1184; AI447224
Mus musculus	Riken	ILMN_202334	ILMN_202334	5830400N10RIK	ri|5830400N10|PX00038E18|AK017887|1584					AK017887	5830400N10Rik		ILMN_2548798	005890546	S	1213	CTCTCTCTCTCTAGTGCAGGGACTGCTGGTGAGTTCAACTATGACCACCT										
Mus musculus	Riken	ILMN_203641	ILMN_203641	9330157O18RIK	ri|9330157O18|PX00105N23|AK034117|2926					AK034117	9330157O18Rik		ILMN_1241759	002260626	S	2676	AGCACACAGTGGCCTGGAACTCATAGCCCTCCTGCCTTTCCCTCTGGAGA										
Mus musculus	RefSeq	ILMN_223544	ILMN_223544	RBCK1	NM_019705.3	NM_019705.3		24105	145046238	NM_019705.3	Rbck1	NP_062679.2	ILMN_1214070	007550181	S	1354	GGATGATGTCAACGAGTTCACCTGTCCTGTGTGCACCCGTGTCAACTGCC	2	-	152144870-152144919	2qG3	Mus musculus RanBP-type and C3HC4-type zinc finger containing 1 (Rbck1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ubce7ip3; HOIL-1; UIP28; AL033326; RP23-452D3.5; HOIL-1L	Ubce7ip3; HOIL-1; UIP28; AL033326; RP23-452D3.5; HOIL-1L
Mus musculus	RefSeq	ILMN_209351	ILMN_249196	3110006E14RIK	XM_906878.3	XM_906878.3		76980	149264483	XM_906878.3	3110006E14Rik	XP_911971.3	ILMN_1239445	004390195	S	2268	CTGTGCTGCTGTTCGAAGATAAACCTGTGCCATTTGATGAGAGGCAGGGG				13qC1	PREDICTED: Mus musculus RIKEN cDNA 3110006E14 gene (3110006E14Rik), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223101	ILMN_223101	1200011I18RIK	NM_026177.3	NM_026177.3		67467	71043962	NM_026177.3	1200011I18Rik	NP_080453.2	ILMN_1238691	005550719	S	2979	CGCAACCACCCAGTGGGAGTATTATATGGTTTAGTGCTGTAAGCAATGCC	14	-	76488458-76488507	14qD3	Mus musculus RIKEN cDNA 1200011I18 gene (1200011I18Rik), mRNA.					
Mus musculus	MEEBO	ILMN_186336	ILMN_186336	TNA	scl021922.2_0	XM_147338.1			20896588	XM_147338.1	Tna		ILMN_2434661	001850563	S	10	GCTCAAAGATGTTCGAGGAACTCAAGAACAGGATGGATGTCCTGGCCCAG										
Mus musculus	MEEBO	ILMN_187430	ILMN_187430	TRADD	scl34411.5_606				51764436	XM_134502	Tradd		ILMN_1233313	005090437	S	20	TCCTGTTAGTGAAGGATAACCGGGGGTTTGGTGAACCATCATATACATTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of hair follicle development [goid 51798] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194178	ILMN_313755	LOC100040701	XM_001475101.1	XM_001475101.1		100040701	149264834	XM_001475101.1	LOC100040701	XP_001475151.1	ILMN_1226137	002190161	S	370	CCTCTGGACAGATGGGGACCAAGCATTGATCTTCCCAGACTGATAACTGC	14	+	3995753-3995775:4023512-4023538	14qA1	PREDICTED: Mus musculus hypothetical protein LOC100040701 (LOC100040701), mRNA.					
Mus musculus	RefSeq	ILMN_189118	ILMN_313755	LOC100040701	XM_001475101.1	XM_001475101.1		100040701	149264834	XM_001475101.1	LOC100040701	XP_001475151.1	ILMN_1217222	005360463	S	533	GTAAGCAGACAGATGCCTTGATGTCTCTGAGAAGTTGCAAAAGAGACAGC	14	+	4023652-4023701	14qA1	PREDICTED: Mus musculus hypothetical protein LOC100040701 (LOC100040701), mRNA.					
Mus musculus	RefSeq	ILMN_220109	ILMN_251042	CFP	NM_008823.3	NM_008823.3		18636	142364936	NM_008823.3	Cfp	NP_032849.2	ILMN_1228320	001770717	S	1453	GAAGAAACCCTAAAATCCCTTGCTTCCATTCTGACCCCCTGACTTTCTAG	X	-	20502682-20502719:20502720-20502731	XqA1.3	Mus musculus complement factor properdin (Cfp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		BCFG; Pfc	BCFG; Pfc
Mus musculus	RefSeq	ILMN_201182	ILMN_201182	LOC382054	XM_356127.1	XM_356127.1			38089663	XM_356127.1	LOC382054		ILMN_1221554	003850075	S	1034	TAACTGGGCATAGTGGTCTGTCACTCAGGAGGTGAGGCAGGAAGAGCAGA										
Mus musculus	RefSeq	ILMN_216421	ILMN_216421	RASGRP3	NM_207246.2	NM_207246.2		240168	46559776	NM_207246.2	Rasgrp3	NP_997129.1	ILMN_2908687	000510010	S	4387	GCTGGCAAACCCTCTAAAAACACCCAGAAGGAAACCTTAGGGAAGGCTGG	17	+	75433908-75433957	17qE2	Mus musculus RAS, guanyl releasing protein 3 (Rasgrp3), mRNA.	Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A protein complex that stimulates the exchange of guanyl nucleotides by a GTPase [goid 32045] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IDA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a kinase, any enzyme that catalyzes the transfer of a phosphate group [goid 19900] [evidence IPI]; Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [evidence IPI]; Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [evidence IDA]	MGC74365; Gm327; BC066069; MGC79207	MGC74365; Gm327; BC066069; MGC79207
Mus musculus	RefSeq	ILMN_196635	ILMN_196635	B230205M18	XM_110361.3	XM_110361.3			38075608	XM_110361.3	B230205M18		ILMN_1257672	003290347	S	4241	TCAAGTATTGGGGGTTTGGGGGCTACACCTGCTGGCAAAGGGAGACTAGC										
Mus musculus	RefSeq	ILMN_223412	ILMN_223412	CDC42BPB	NM_183016.1	NM_183016.1		217866	33942080	NM_183016.1	Cdc42bpb	NP_898837.1	ILMN_2867696	002070427	S	6074	CCTCCCTTCCCCGTTGGCGTGCTTGGTGACACGATTCAGGGTGAGCACTT	12	-	112531418-112531467	12qF1	Mus musculus CDC42 binding protein kinase beta (Cdc42bpb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	DMPK-like	DMPK-like
Mus musculus	RefSeq	ILMN_234934	ILMN_234934	OTTMUSG00000000651	NM_001045532.1	NM_001045532.1		666317	113865900	NM_001045532.1	OTTMUSG00000000651	NP_001038997.1	ILMN_2826278	006200609	S	576	TCGTTCTTCATATGGCATGATCAGCTGCCTAGACAATGACTTTAAGAAGG	13	+	27949447-27949496	13qA3.1	Mus musculus predicted gene, OTTMUSG00000000651 (OTTMUSG00000000651), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]		
Mus musculus	MEEBO	ILMN_208720	ILMN_208720	IQCC	scl23762.4_16				37574127	NM_198026	Iqcc		ILMN_2769171	003940711	S	1558	TCACCTCCTCTTGGGGTAAGTAGGGTGGGAGGATCCTGGAGAATAAAAGT										
Mus musculus	RefSeq	ILMN_211699	ILMN_211699	CRY1	NM_007771.3	NM_007771.3		12952	55742745	NM_007771.3	Cry1	NP_031797.1	ILMN_2618668	003290364	S	2653	CAGTATATTTTTGATAATTTTTCATGTATGGTAAAAGTTAAAGTTAACAG	10	-	84594758-84594807	10qC1	Mus musculus cryptochrome 1 (photolyase-like) (Cry1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IMP]	The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA [goid 3913] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU020726; Phll1; AU021000	AU020726; Phll1; AU021000
Mus musculus	MEEBO	ILMN_185445	ILMN_185445	LBA1	scl00320429.1_244				51765209	XM_284542	Lba1		ILMN_1236363	000160524	S	16	TGCCTGGACTTCCTCTGGTCTCTTAAGCATTCTGTGCGCCCCTGACATTG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_209188	ILMN_209188	RBMX2	NM_173376.3	NM_173376.3		209003	146198607	NM_173376.3	Rbmx2	NP_775552.1	ILMN_2593392	003850347	S	1006	GAGTCCAGATAAGTCCCATAGGCACAAAAAGTACAGGCACTCTCGGGAGC				XqA4	Mus musculus RNA binding motif protein, X-linked 2 (Rbmx2), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	CGI-79; 2700089A17Rik; 2810411A03Rik	CGI-79; 2700089A17Rik; 2810411A03Rik
Mus musculus	RefSeq	ILMN_196531	ILMN_322099	LOC100048616	XM_001480824.1	XM_001480824.1		100048616	149259776	XM_001480824.1	LOC100048616	XP_001480874.1	ILMN_1241963	002060184	S	6268	GGAAACTGTGTGATTTCTTCTAACAAATGATGGGAGCCTTTCTCAGTGAG					PREDICTED: Mus musculus similar to regulatory factor X domain containing 2 homolog (LOC100048616), mRNA.					
Mus musculus	RefSeq	ILMN_196531	ILMN_322099	LOC100048616	XM_001480824.1	XM_001480824.1		100048616	149259776	XM_001480824.1	LOC100048616	XP_001480874.1	ILMN_2619048	006060537	S	6260	TACCCAAAGGAAACTGTGTGATTTCTTCTAACAAATGATGGGAGCCTTTC					PREDICTED: Mus musculus similar to regulatory factor X domain containing 2 homolog (LOC100048616), mRNA.					
Mus musculus	RefSeq	ILMN_196531	ILMN_322099	LOC100048616	XM_001480824.1	XM_001480824.1		100048616	149259776	XM_001480824.1	LOC100048616	XP_001480874.1	ILMN_1218317	002370037	S	4278	ACTGTTTGATCCAGGTCGTCAGCAGGGACAGGATGATGAAGCCACACTGG					PREDICTED: Mus musculus similar to regulatory factor X domain containing 2 homolog (LOC100048616), mRNA.					
Mus musculus	RefSeq	ILMN_222896	ILMN_222896	HOXD4	NM_010469.1	NM_010469.1		15436	6754237	NM_010469.1	Hoxd4	NP_034599.1	ILMN_1219807	004640484	S	2216	GGCAGGAGCTACTGAGAACATAAACCCTTGGCGAGTCATTAAACTCCTGA	2	+	74566873-74566922	2qC3	Mus musculus homeo box D4 (Hoxd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hox-5.1; 6030436D05Rik; Hox-4.2	Hox-5.1; 6030436D05Rik; Hox-4.2
Mus musculus	RefSeq	ILMN_190308	ILMN_229512	3110053B16RIK	XM_994752.1	XM_994752.1		73185	94419692	XM_994752.1	3110053B16Rik	XP_999846.1	ILMN_2468982	004610215	S	488	GGACTGGAGGTCTTTGCAGCGAGGAATGATAAAAGCCAAGCATCTATCGA					PREDICTED: Mus musculus RIKEN cDNA 3110053B16 gene (3110053B16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_261544	ILMN_261544	EN1	NM_010133.1	NM_010133.1		13798	7106304	NM_010133.1	En1	NP_034263.1	ILMN_3163581	006350544	S	2064	GAATGTTTTTGCTTCTCTGGGTACCTCCTGCACCCCCAACGCTGGCCCTG	1	+	122504272-122504321	1qE2.3	Mus musculus engrailed 1 (En1), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages [goid 30917] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Mo-en.1; En-1	Mo-en.1; En-1
Mus musculus	Riken	ILMN_205448	ILMN_205448	LTBP1	ri|E330034H12|PX00318D06|AK054512|1905					AK054512	Ltbp1		ILMN_1214439	001740184	S	1565	CTGTGCCACTGGACGAACACCAAAGTGTCCCCACTGTCCTCTTCTAGGGA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_196140	ILMN_196140	BC037527	scl38279.2_20				26986554	NM_172259	BC037527		ILMN_1240281	002070487	S	20	TGACTTGACAGCGAAACAAGCTGCCGGGGTTGAGACTTGCATGGAATCAA										
Mus musculus	MEEBO	ILMN_187075	ILMN_187075	ZFP236	scl0329002.1_2	NM_177832.2			31342900	NM_177832.2	Zfp236		ILMN_2483370	004560326	S	11	TGGGGGACTCCACGAGTGTGGATCTATGGAGGCCTTGTATTTGGAGAACT										
Mus musculus	Riken	ILMN_201606	ILMN_201606	0610038F15RIK	ri|0610038F15|R000004H07|AK002794|638					AK002794	0610038F15Rik		ILMN_2543157	004250086	S	343	TGAGGACACTTTGCAGGAGACGGAGATTTAGATAACCCGTGTGGGTGCCC										
Mus musculus	RefSeq	ILMN_210266	ILMN_210266	3110023B02RIK	NM_152807.1	NM_152807.1		67291	22779892	NM_152807.1	3110023B02Rik	NP_690020.1	ILMN_2836246	006220546	S	2501	GTAAAGGTCTTCATGGTGTAAGGGGCAGGAGACATAAGGGCTTCCCCAGC	11	+	120280185-120280234	11qE2	Mus musculus RIKEN cDNA 3110023B02 gene (3110023B02Rik), mRNA.					
Mus musculus	MEEBO	ILMN_220602	ILMN_220602	5730478M09RIK	scl48639.12.1_60	XM_358792.1			38080568	XM_358792.1	5730478M09Rik		ILMN_2724285	001980465	S	2281	GTACAGGCTTCCCAGCTGACTCCACATTTTAATTTGTACGATGAAAGGGT										
Mus musculus	RefSeq	ILMN_199791	ILMN_199791	LOC383018	XM_356800.1	XM_356800.1			38077378	XM_356800.1	LOC383018		ILMN_1223142	002260719	S	185	CAGGATTCATGTGCCAGGGTGCATGTGGTTTTGGGAAGGGGAAAGAAGGC										
Mus musculus	RefSeq	ILMN_222737	ILMN_222737	OSBPL10	NM_148958.2	NM_148958.2		74486	118130153	NM_148958.2	Osbpl10	NP_683761.1	ILMN_2754067	001690040	S	1535	CGACACAACCACCCTGCCTGTGTATCCTAAGAAGCTTAGACCCCTGGAGA	9	+	115135910-115135959	9qF3	Mus musculus oxysterol binding protein-like 10 (Osbpl10), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]		4933433D06Rik; OPR-10; C820004B04Rik	4933433D06Rik; OPR-10; C820004B04Rik
Mus musculus	RefSeq	ILMN_222073	ILMN_222073	2610209A20RIK	NM_026010.1	NM_026010.1		67164	13385513	NM_026010.1	2610209A20Rik	NP_080286.1	ILMN_2744228	001340537	S	1275	CAACAGAGATGGGTTAGAGGCTTCATAAAGACAAGGTACTCCCTCCATGC	7	+	107309487-107309536	7qE2	Mus musculus RIKEN cDNA 2610209A20 gene (2610209A20Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid [goid 9107] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: octanoyl-acyl-carrier-protein + protein = protein N6-(octanoyl)lysine + acyl carrier protein [goid 33819] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222073	ILMN_222073	2610209A20RIK	NM_026010.1	NM_026010.1		67164	13385513	NM_026010.1	2610209A20Rik	NP_080286.1	ILMN_3145474	004810605	A	1351	TCCTAAGTGGGATTCCTAGATCTGTGTGCATGTCAGGCCTGCTAAGAAGC	7	+	107309563-107309612	7qE2	Mus musculus RIKEN cDNA 2610209A20 gene (2610209A20Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid [goid 9107] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: octanoyl-acyl-carrier-protein + protein = protein N6-(octanoyl)lysine + acyl carrier protein [goid 33819] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215321	ILMN_248911	1700001L19RIK	XM_906587.3	XM_906587.3		69315	149264490	XM_906587.3	1700001L19Rik	XP_911680.1	ILMN_2658067	002490468	S	541	ACTTCTACAGGAAGAACGAGATCCCCAGCATCAAGGGGCCCGGCTTTGGG				13qB3	PREDICTED: Mus musculus RIKEN cDNA 1700001L19 gene (1700001L19Rik), mRNA.					
Mus musculus	Riken	ILMN_206655	ILMN_206655	E530018B05RIK	ri|E530018B05|PX00319E22|AK089155|2254					AK089155	E530018B05Rik		ILMN_1223894	000450156	S	1962	CTACATCTGGATCCGCAGGGCAGCAGAAAGAGAGAGATCTTGGTCAGAGC										
Mus musculus	Riken	ILMN_206206	ILMN_206206	C130017D06RIK	ri|C130017D06|PX00167N03|AK081432|2527					AK081432	C130017D06Rik		ILMN_1258021	001050487	S	2162	CTGGTGTGTGTGGGTTTTGACACACTGTGCTGACCAAGTAACCAGCATCG										
Mus musculus	RefSeq	ILMN_218140	ILMN_218140	PNLIPRP2	NM_011128.1	NM_011128.1		18947	6755117	NM_011128.1	Pnliprp2	NP_035258.1	ILMN_2692167	004610112	S	956	CAAGTACTATGCCAGCAGCATCCTCAACCCTGACGGCTTCCTGGGGTACC	19	+	58843093-58843142	19qD2	Mus musculus pancreatic lipase-related protein 2 (Pnliprp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence IMP]; A defense response that is mediated by cells [goid 6968] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]	PLRP2	PLRP2
Mus musculus	RefSeq	ILMN_218140	ILMN_218140	PNLIPRP2	NM_011128.1	NM_011128.1		18947	6755117	NM_011128.1	Pnliprp2	NP_035258.1	ILMN_2990661	000870524	S	1200	CCAAAGAAGCTGAGTGGGTACATCTTGGTCGCTCTGTACGGATGTAACGC	19	+	58848594-58848643	19qD2	Mus musculus pancreatic lipase-related protein 2 (Pnliprp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence IMP]; A defense response that is mediated by cells [goid 6968] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]	PLRP2	PLRP2
Mus musculus	MEEBO	ILMN_184256	ILMN_184256	A030009B12RIK	scl49005.2_412				23956189	NM_026588	A030009B12Rik		ILMN_1251990	005290072	S	1	CCCCAACCTGAGCACCACATATTTAATCAGTTGCTGAATATTTTGTATAC										
Mus musculus	RefSeq	ILMN_187029	ILMN_224382	SEPSECS	NM_172490.3	NM_172490.3		211006	146149094	NM_172490.3	Sepsecs	NP_766078.1	ILMN_1232807	004070544	S	176	CTGCATGAGCTTGCAGTCATGGATAGCAACAATTTCTTGGGTAATTGTGG				5qC1	Mus musculus Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase (Sepsecs), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Interacting selectively with transfer RNA [goid 49] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SLA; 9130208G10; D5Ertd135e; AA986712	SLA; 9130208G10; D5Ertd135e; AA986712
Mus musculus	RefSeq	ILMN_187029	ILMN_224382	SEPSECS	NM_172490.3	NM_172490.3		211006	146149094	NM_172490.3	Sepsecs	NP_766078.1	ILMN_2742345	005560487	S	1607	GGAAGAGACTGGTCTGAGGGTGATTGCTTTTTATCCTTAGATTGCCTCAG				5qC1	Mus musculus Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase (Sepsecs), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Interacting selectively with transfer RNA [goid 49] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SLA; 9130208G10; D5Ertd135e; AA986712	SLA; 9130208G10; D5Ertd135e; AA986712
Mus musculus	RefSeq	ILMN_214979	ILMN_214979	IFIT3	NM_010501.2	NM_010501.2		15959	146231982	NM_010501.2	Ifit3	NP_034631.1	ILMN_1230458	000670670	S	146	CAGGGAAGGAAGTATGTCCAGTCATATGGAAGACAGGGTGTGCAACCAGG				19qC1	Mus musculus interferon-induced protein with tetratricopeptide repeats 3 (Ifit3), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC107331; Ifi49	MGC107331; Ifi49
Mus musculus	MEEBO	ILMN_194030	ILMN_194030	HPGD	scl33809.7_61				6680262	NM_008278	Hpgd		ILMN_2649199	002450343	S	1188	TTAAATGATTCACTTCGTGTGTTTGCACTTCAAAAGCGGGAAGCTCCTTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprost-13-enoate + NAD+ = (5Z,13E)-11-alpha-hydroxy-9,15-dioxoprost-13-enoate + NADH + H+ [goid 16404] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214774	ILMN_214774	PHF16	NM_199317.1	NM_199317.1		382207	40556367	NM_199317.1	Phf16	NP_955021.1	ILMN_2657074	000630333	S	2152	GAGGCCACCAATACATGGGTGAAGCCTACTGAGGACCTCCAGTACTGTGT	X	+	20094702-20094751	XqA1.3	Mus musculus PHD finger protein 16 (Phf16), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0215; Jade3; AW544806; AI851988; 5730598B06	mKIAA0215; Jade3; AW544806; AI851988; 5730598B06
Mus musculus	RefSeq	ILMN_214774	ILMN_214774	PHF16	NM_199317.1	NM_199317.1		382207	40556367	NM_199317.1	Phf16	NP_955021.1	ILMN_1238998	002140400	S	2237	GTGGGGTAGACAGCTTCTCAGGCGTCCCACAGGAAGAGCTTCATATCAGG	X	+	20094787-20094836	XqA1.3	Mus musculus PHD finger protein 16 (Phf16), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0215; Jade3; AW544806; AI851988; 5730598B06	mKIAA0215; Jade3; AW544806; AI851988; 5730598B06
Mus musculus	RefSeq	ILMN_247686	ILMN_247686	4932441K18RIK	NM_178935.2	NM_178935.2		353170	31341447	NM_178935.2	4932441K18Rik	NP_849266.1	ILMN_2895908	004920441	S	3412	GACCCCAAAATGTAGCGAAACTTGGGTATCAGGCCATTTCATCCTCAGAC	X	-	158123369-158123418	XqF4	Mus musculus RIKEN cDNA 4932441K18 gene (4932441K18Rik), mRNA.				Lrp; Fiat	Lrp; Fiat
Mus musculus	RefSeq	ILMN_191671	ILMN_240720	4930503L19RIK	NM_172967.2	NM_172967.2		269033	142371566	NM_172967.2	4930503L19Rik	NP_766555.1	ILMN_1231151	002350022	S	2073	CCTGGTCGATGATACCAGTGGGAGACAGTCACCAAAGAAGTGAAGAGGAA	18	-	70612962-70612969:70612970-70613011	18qE2	Mus musculus RIKEN cDNA 4930503L19 gene (4930503L19Rik), mRNA. XM_001001515	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			9930107F24; BB148262	9930107F24; BB148262
Mus musculus	RefSeq	ILMN_225769	ILMN_225769	OLFR106	NM_001011764.1	NM_001011764.1		257925	58801311	NM_001011764.1	Olfr106	NP_001011764.1	ILMN_3161068	000990193	S	312	GCTTTATTTTTTCCACCTTCTGGGTAGCACAGAAGCCCTGCTGCTGGCCG	17	+	37531796-37531845	17qB1	Mus musculus olfactory receptor 106 (Olfr106), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR250-6	MOR250-6
Mus musculus	Riken	ILMN_203816	ILMN_203816	9530014D17RIK	ri|9530014D17|PX00111B21|AK035315|3196					AK035315	9530014D17Rik		ILMN_2560197	005290180	S	2846	GGATAAAACACAGGGCCTTACACATGCTAGACAAACACACTACCCACACC										
Mus musculus	MEEBO	ILMN_186253	ILMN_186253	GLCE	scl074780.1_156				51036241	NM_033320	Glce		ILMN_1236500	004860397	S	20	ATTTGGAGAGGAGGTGGTTAATTTGTGCATCGGAAAGACTTTACCCTGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heparin, any member of a group of glycosaminoglycans of average Mr (6000-20000), consisting predominantly of alternating alpha1->4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 30210] [evidence IDA]; The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule [goid 16857] [evidence IDA]; Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule [goid 16857] [evidence IMP]; Catalysis of the reaction: UDP-glucuronate = UDP-L-iduronate [goid 50379] [evidence ISS]		
Mus musculus	MEEBO	ILMN_186253	ILMN_186253	GLCE	scl074780.1_156				51036241	NM_033320	Glce		ILMN_2750543	007560041	S	1867	TGGAATCTCTTAAAGCCATGCTGCCCTTGTATGATACTGGCTCCGGGACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heparin, any member of a group of glycosaminoglycans of average Mr (6000-20000), consisting predominantly of alternating alpha1->4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 30210] [evidence IDA]; The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule [goid 16857] [evidence IDA]; Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule [goid 16857] [evidence IMP]; Catalysis of the reaction: UDP-glucuronate = UDP-L-iduronate [goid 50379] [evidence ISS]		
Mus musculus	RefSeq	ILMN_221357	ILMN_239602	PRAMEL4	NM_001001319.3	NM_001001319.3		347710	142373617	NM_001001319.3	Pramel4	NP_001001319.2	ILMN_2734446	003130521	S	2240	TATGAAGTATAAATCTGACTAAACTTGGAGTACTTTTGTATTAGACTGTT	4	+	143659062-143659111	4qE1	Mus musculus preferentially expressed antigen in melanoma like 4 (Pramel4), mRNA.				D4Ertd792e; C79430	D4Ertd792e; C79430
Mus musculus	RefSeq	ILMN_201527	ILMN_239602	PRAMEL4	NM_001001319.3	NM_001001319.3		347710	142373617	NM_001001319.3	Pramel4	NP_001001319.2	ILMN_1230882	000020543	S	1600	GTGGGATGGTGATATATATCAGTGGGTAGGAACACCCGACTGCTCTTCCG	4	+	143658422-143658450:143658451-143658471	4qE1	Mus musculus preferentially expressed antigen in melanoma like 4 (Pramel4), mRNA.				D4Ertd792e; C79430	D4Ertd792e; C79430
Mus musculus	RefSeq	ILMN_247299	ILMN_247299	NEUROD2	NM_010895.2	NM_010895.2		18013	31982780	NM_010895.2	Neurod2	NP_035025.2	ILMN_2862362	007210121	S	1701	CCAACAGGCCAGAGGAGTTGGTAAGGGGTGCTGAGTCTCGGGATAGTGTC	11	-	98188117-98188166	11qD	Mus musculus neurogenic differentiation 2 (Neurod2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Ndrf	Ndrf
Mus musculus	RefSeq	ILMN_189906	ILMN_237935	RHOB	NM_007483.2	NM_007483.2		11852	40254647	NM_007483.2	Rhob	NP_031509.1	ILMN_1215212	001710538	S	2010	GTGTAGCATACGCAGTTTTGGTAAAGGAAGGCAACAGGTATTGGGGTCTA	12	-	8504732-8504781	12qA1.1	Mus musculus ras homolog gene family, member B (Rhob), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases angiogenesis [goid 45766] [evidence IMP]; The process of apoptosis in transformed cells, cells that have undergone changes manifested by escape from control mechanisms, increased growth potential, alterations in the cell surface, karyotypic abnormalities, morphological and biochemical deviations from the norm [goid 6927] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence TAS]; Interacting selectively with GDP, guanosine 5'-diphosphate [goid 19003] [evidence IDA]	Arh6; AA017882; MGC117867; Arhb	Arh6; AA017882; MGC117867; Arhb
Mus musculus	MEEBO	ILMN_211125	ILMN_211125	ODF2	scl0003172.1_26				34784204	BC057001	Odf2		ILMN_1214166	005860414	S	2582	CTCCAAGGAACGAGCAGCCCAGAGCAAAATCCTGGACCTTGAGACTCAGC						A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]		
Mus musculus	RefSeq	Gapd	ILMN_207562	GAPDH	NM_008084.2	NM_008084.2		14433	126012538	NM_008084.2	Gapdh	NP_032110.1	ILMN_1377924	005870154	S	1078	AAGGACACTGAGCAAGAGAGGCCCTATCCCAACTCGGCCCCCAACACTGA	6	-	125111974-125112023	6qF3	Mus musculus glyceraldehyde-3-phosphate dehydrogenase (Gapdh), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: glyceraldehyde 3-phosphate + (phosphate / H2O) + NAD(P)+ = (3-phospho-D-glyceroyl-phosphate / 3-phospho-D-glycerate) + NAD(P)H + H+ [goid 8943] [evidence IEA]; Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+ [goid 4365] [evidence IMP]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC103190; MGC102544; MGC103191; MGC102546; Gapd	MGC103190; MGC102544; MGC103191; MGC102546; Gapd
Mus musculus	RefSeq	ILMN_200872	ILMN_200872	LOC385412	XM_358228.1	XM_358228.1			38086719	XM_358228.1	LOC385412		ILMN_1256900	002360653	S	124	AGCAGCTTAAAGAAGGATGGTTCAAAGTCCAGGCTGCCAAAGAGTGTGGC										
Mus musculus	RefSeq	ILMN_212157	ILMN_212157	OLFR1395	NM_146877.1	NM_146877.1		258877	22129124	NM_146877.1	Olfr1395	NP_667088.1	ILMN_2623376	005390500	S	651	TTCCTACCTCAGGATCCTGGTGGCAGTGCTCCGGATGCGCTCTGCAGAAG	11	+	48962411-48962460	11qB1.2	Mus musculus olfactory receptor 1395 (Olfr1395), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR277-1	MOR277-1
Mus musculus	RefSeq	ILMN_248051	ILMN_248051	EG432879	NM_001034882.2	NM_001034882.2		432879	141802323	NM_001034882.2	EG432879	NP_001030054.1	ILMN_3161906	007330152	S	2803	GGCTTGCGTCAGAACTGACCACCTGACAGCACTTCCTTCACCTGCATATG	14	+	79854444-79854493	14qD3	Mus musculus predicted gene, EG432879 (EG432879), mRNA.					
Mus musculus	Riken	ILMN_204365	ILMN_204365	C430009E19RIK	ri|C430009E19|PX00078O08|AK049432|1532					AK049432	C430009E19Rik		ILMN_1248492	000780563	S	1236	GGGTGTCCTTAGTGTGTATGACCCCTCCCCCGACAGTGCTTTAACAAGGC										
Mus musculus	MEEBO	ILMN_185505	ILMN_185505	KRT1-13	scl39573.9.1_104				6754479	NM_010662	Krt1-13		ILMN_2427582	000670494	S	9	TGGCTTCTCAGTGTCTCTACAACAAAGAATAGATGATTCAATAAAGTTTC										
Mus musculus	MEEBO	ILMN_209096	ILMN_209096	PGLYRP1	scl33021.4.288_87	NM_009402.1			6679292	NM_009402.1	Pglyrp1		ILMN_2592486	003140246	S	504	ACCGGGATGTGCAAAGCACTCTCTCTCCAGGTGACCAACTCTATCAGGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Combining with a peptidoglycan to initiate a change in cell activity [goid 16019] [evidence ISA]; Catalysis of the hydrolysis of the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell-wall glycopeptides [goid 8745] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212580	ILMN_212580	0610031J06RIK	NM_020003.1	NM_020003.1		56700	9910457	NM_020003.1	0610031J06Rik	NP_064387.1	ILMN_2727437	000540041	S	1031	GAACAACTTCTGTGCCTTCAATCTGACCTTTGGGGCTCCCACGGGCCCTG	3	+	88131958-88132007	3qF1	Mus musculus RIKEN cDNA 0610031J06 gene (0610031J06Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AB027141; NCU-G1	AB027141; NCU-G1
Mus musculus	RefSeq	ILMN_212580	ILMN_212580	0610031J06RIK	NM_020003.1	NM_020003.1		56700	9910457	NM_020003.1	0610031J06Rik	NP_064387.1	ILMN_2793281	005810243	S	1259	CCAGTCCATAAACTGAAACCCACTCTCCAGAGGGAAGGGCAGTGTCTCAG	3	+	88132275-88132290:88132291-88132324	3qF1	Mus musculus RIKEN cDNA 0610031J06 gene (0610031J06Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AB027141; NCU-G1	AB027141; NCU-G1
Mus musculus	RefSeq	ILMN_212580	ILMN_212580	0610031J06RIK	NM_020003.1	NM_020003.1		56700	9910457	NM_020003.1	0610031J06Rik	NP_064387.1	ILMN_2628021	003800215	S	1350	CTGCAGAACCTCAGAAGCCAGCCTCAACCTACTGGGGTGCTCCCAGTAAG	3	+	88132366-88132415	3qF1	Mus musculus RIKEN cDNA 0610031J06 gene (0610031J06Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AB027141; NCU-G1	AB027141; NCU-G1
Mus musculus	RefSeq	ILMN_198677	ILMN_255167	IQSEC2	NM_001005475.1	NM_001005475.1		245666	53832027	NM_001005475.1	Iqsec2	NP_001005475.1	ILMN_1257253	002260392	S	3830	AGCCAAGCCGGATCAGCACTGTGGTCTGAGGAACGGGATGAGTGTACTGG	X	+	148658402-148658451	XqF3	Mus musculus IQ motif and Sec7 domain 2 (Iqsec2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	mKIAA0522; KIAA0522	mKIAA0522; KIAA0522
Mus musculus	RefSeq	ILMN_255167	ILMN_255167	IQSEC2	NM_001005475.1	NM_001005475.1		245666	53832027	NM_001005475.1	Iqsec2	NP_001005475.1	ILMN_2824098	004890670	S	4754	AGGGCACCCAGCATCAGCCCTCGGGAAAGACTCCCAGAGGACCACCCTGA	X	+	148659326-148659375	XqF3	Mus musculus IQ motif and Sec7 domain 2 (Iqsec2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	mKIAA0522; KIAA0522	mKIAA0522; KIAA0522
Mus musculus	RefSeq	ILMN_217708	ILMN_217708	LIPH	NM_153404.2	NM_153404.2		239759	140971804	NM_153404.2	Liph	NP_700453.1	ILMN_1217063	000380332	S	1796	GGGTTTGGAAATCCCTTGGGTCCCTTGGGTGGACTACTGTGAACATGCTT	16	-	21955664-21955713	16qB1	Mus musculus lipase, member H (Liph), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	H06; PLA1B; lpd1; P3; C130037N08Rik; mPA-PLA1; lpd2; Lpdlr; D16Wsu119e	H06; PLA1B; lpd1; P3; C130037N08Rik; mPA-PLA1; lpd2; Lpdlr; D16Wsu119e
Mus musculus	RefSeq	ILMN_217708	ILMN_217708	LIPH	NM_153404.2	NM_153404.2		239759	140971804	NM_153404.2	Liph	NP_700453.1	ILMN_2760434	002230379	S	1888	TCTCTTTTTCAACACCAGCTTTCCTCCTGGACTGTTTGCCTCGGGGCGAC	16	-	21955572-21955621	16qB1	Mus musculus lipase, member H (Liph), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	H06; PLA1B; lpd1; P3; C130037N08Rik; mPA-PLA1; lpd2; Lpdlr; D16Wsu119e	H06; PLA1B; lpd1; P3; C130037N08Rik; mPA-PLA1; lpd2; Lpdlr; D16Wsu119e
Mus musculus	RefSeq	ILMN_222956	ILMN_222956	LGALS3	NM_010705.2	NM_010705.2		16854	141803538	NM_010705.2	Lgals3	NP_034835.1	ILMN_1223317	000510474	S	876	GAGTGGGAAACTTTGCATTTCTCTCTCCTTATCCTTCTTGTAAGACATCC	14	+	48005397-48005446	14qC1	Mus musculus lectin, galactose binding, soluble 3 (Lgals3), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]	Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	L-34; Mac-2; GBP; gal3	L-34; Mac-2; GBP; gal3
Mus musculus	Riken	ILMN_206595	ILMN_206595	SYN3	ri|E030015M19|PX00204P12|AK086955|2844					AK086955	Syn3		ILMN_1223010	002140242	S	2630	CCGTGGGCCTAGGGAACTTACTGAAGCCTTGGTCTCGCTGGGAGCTCACT						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	Riken	ILMN_205185	ILMN_205185	C230095K20RIK	ri|C230095K20|PX00177N15|AK049053|2968					AK049053	C230095K20Rik		ILMN_1250354	005700010	S	2731	GAACTGCCAGGTGTGTTGGCGCATGCCTAGAAACCCAGCTACTTGGTCAG										
Mus musculus	RefSeq	ILMN_224137	ILMN_234229	LY6C1	NM_010741.2	NM_010741.2		17067	58331141	NM_010741.2	Ly6c1	NP_034871.2	ILMN_1254927	005550671	S	292	GCCCTGCTGGTGTGCCAATCAGGGATCCTAACATCAGGGAGAGGACTTCC	15	-	74875945-74875994	15qD3	Mus musculus lymphocyte antigen 6 complex, locus C1 (Ly6c1), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]			Ly6c; Ly-6C; AA959465; AA682074	Ly6c; Ly-6C; AA959465; AA682074
Mus musculus	RefSeq	ILMN_214331	ILMN_214331	CD209C	NM_130903.2	NM_130903.2		170776	24475794	NM_130903.2	Cd209c	NP_570973.1	ILMN_3131225	001570056	A	1263	GCTATGCCTGGATGGGCCTGTCAGACCTGAAGCATGAAGGCAGATGGCAC	8	-	3944101-3944150	8qA1.1	Mus musculus CD209c antigen (Cd209c), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]	SIGNR2; mSIGNR2	SIGNR2; mSIGNR2
Mus musculus	RefSeq	ILMN_214331	ILMN_214331	CD209C	NM_130903.2	NM_130903.2		170776	24475794	NM_130903.2	Cd209c	NP_570973.1	ILMN_3054469	004830471	I	906	TCCCCTGACTCCTCCAGTATGTGACACTTTGTCCACAGCCACAAACATAC	8	-	3945908-3945908:3945909-3945957	8qA1.1	Mus musculus CD209c antigen (Cd209c), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]	SIGNR2; mSIGNR2	SIGNR2; mSIGNR2
Mus musculus	RefSeq	ILMN_222061	ILMN_222061	OLFR1065	NM_146408.1	NM_146408.1		258403	46575925	NM_146408.1	Olfr1065	NP_666520.1	ILMN_2744014	001710519	S	779	GCAGCCCAAATCCAGTCATTCCTTTGACACTGATAAATTAGCTTCTGTTT	2	-	86285309-86285358	2qD	Mus musculus olfactory receptor 1065 (Olfr1065), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR190-1	MOR190-1
Mus musculus	RefSeq	ILMN_194957	ILMN_246069	PLCB1	NM_019677.1	NM_019677.1		18795	9845288	NM_019677.1	Plcb1	NP_062651.1	ILMN_2754011	006420050	S	3486	CAACTTTACTCCCCCCAACCCTCAAGCTCTCAAGTGGTGAGCACCGTCCT	2	+	135225044-135225083:135225084-135225093	2qF3	Mus musculus phospholipase C, beta 1 (Plcb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]	mKIAA0581; Plcb; AI132408; 3110043I21Rik	mKIAA0581; Plcb; AI132408; 3110043I21Rik
Mus musculus	Riken	ILMN_204264	ILMN_204264	RAB1	ri|C820009D21|PX00088B03|AK050526|963					AK050526	Rab1		ILMN_1228395	007550750	S	795	CTCTGCTGAGTGTGTGCATGTTAGAAGGGCCTGGGGGGCCTCTCTGCTTA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence ISA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217005	ILMN_217005	NOTCH2	NM_010928.1	NM_010928.1		18129	33859591	NM_010928.1	Notch2	NP_035058.1	ILMN_2980247	002850056	S	7381	TCCAGGGCGAGCACCCATACCTGACACCATCCCCAGAGTCTCCTGACCAA	3	+	98232647-98232696	3qF2.2	Mus musculus Notch gene homolog 2 (Drosophila) (Notch2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IC ]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	N2; AI853703	N2; AI853703
Mus musculus	RefSeq	ILMN_197800	ILMN_197800	LOC230143	XM_149427.2	XM_149427.2			23680229	XM_149427.2	LOC230143		ILMN_1236823	000630646	S	154	GGCGAAGAAGAGTCCTCAACCTGGGAAACAGGCAGAGAGCATCCACCTCC										
Mus musculus	RefSeq	ILMN_206925	ILMN_236993	EG434775	XR_001556.1	XR_001556.1		434775	94407352	XR_001556.1	EG434775		ILMN_1225040	001850240	S	3305	GGGCCTATGGTTTCTATCCTTCATATCCAGGTCTTGACTCCTTCGTCTTC	X	-	44786370-44786419	XqA4	PREDICTED: Mus musculus predicted gene, EG434775 (EG434775), misc RNA.					
Mus musculus	RefSeq	ILMN_224294	ILMN_260771	ETV4	NM_008815.2	NM_008815.2		18612	121582413	NM_008815.2	Etv4	NP_032841.2	ILMN_2778111	000270010	S	1920	CGAAGTTCGCTGTGGCTCACCTGTACCTTCAGTTCAGCTTGGCCTCTGCC	11	-	101631422-101631471	11qD	Mus musculus ets variant gene 4 (E1A enhancer binding protein, E1AF) (Etv4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IPI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IPI]	Pea-3; Pea3; AW414408	Pea-3; Pea3; AW414408
Mus musculus	RefSeq	ILMN_216994	ILMN_216994	OLFR140	NM_020515.1	NM_020515.1		57272	11464994	NM_020515.1	Olfr140	NP_065261.1	ILMN_3000343	002350307	S	258	GGGAAGAGCCATCTCTTTTGAGGGCTGCTTGGCCCAGTTCTTTGTGGCTC	2	-	89892172-89892221	2qE1	Mus musculus olfactory receptor 140 (Olfr140), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Ora16; MOR235-1; A16	Ora16; MOR235-1; A16
Mus musculus	RefSeq	ILMN_209006	ILMN_209006	KAT2B	NM_020005.3	NM_020005.3		18519	118130526	NM_020005.3	Kat2b	NP_064389.2	ILMN_1231686	001090326	S	2185	CCAAATGCTTGGCCTTTCATGGAACCAGTGAAGAGAACAGAAGCTCCGGG	17	+	53805154-53805203	17qC	Mus musculus K(lysine) acetyltransferase 2B (Kat2b), mRNA.	A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IDA]; The addition of an acetyl group to a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6473] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Catalysis of the addition of an acetyl group to a histone, specific for histones H3 and H4 [goid 4406] [evidence IDA]	A930006P13Rik; AI461839; AW536563	A930006P13Rik; AI461839; AW536563
Mus musculus	RefSeq	ILMN_209006	ILMN_209006	KAT2B	NM_020005.3	NM_020005.3		18519	118130526	NM_020005.3	Kat2b	NP_064389.2	ILMN_1215305	000940731	S	2369	CTCCCGAGAGCGAGTACTACAAATGCGCCAGCATCCTGGAGAAGTTCTTC	17	+	53810105-53810154	17qC	Mus musculus K(lysine) acetyltransferase 2B (Kat2b), mRNA.	A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IDA]; The addition of an acetyl group to a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6473] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Catalysis of the addition of an acetyl group to a histone, specific for histones H3 and H4 [goid 4406] [evidence IDA]	A930006P13Rik; AI461839; AW536563	A930006P13Rik; AI461839; AW536563
Mus musculus	RefSeq	ILMN_209006	ILMN_209006	KAT2B	NM_020005.3	NM_020005.3		18519	118130526	NM_020005.3	Kat2b	NP_064389.2	ILMN_2591641	001660181	S	193	AAGAAGGCGCAGTTGCGCTCTGCTCCGCGGGCGAAGAAGCTGGAGAAACT	17	+	53706832-53706881	17qC	Mus musculus K(lysine) acetyltransferase 2B (Kat2b), mRNA.	A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IDA]; The addition of an acetyl group to a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6473] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Catalysis of the addition of an acetyl group to a histone, specific for histones H3 and H4 [goid 4406] [evidence IDA]	A930006P13Rik; AI461839; AW536563	A930006P13Rik; AI461839; AW536563
Mus musculus	RefSeq	ILMN_216228	ILMN_216228	SLC39A11	NM_027216.4	NM_027216.4		69806	141803321	NM_027216.4	Slc39a11	NP_081492.3	ILMN_2668706	007320181	S	2338	GGGCTATCAGTATCTTGCCTCTGTGTTTACATGTTCCGTCTCTCCAAGGA	11	-	113106448-113106497	11qE2	Mus musculus solute carrier family 39 (metal ion transporter), member 11 (Slc39a11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	1810074D23Rik	1810074D23Rik
Mus musculus	RefSeq	ILMN_189733	ILMN_252518	ZFP7	NM_145916.1	NM_145916.1		223669	22095020	NM_145916.1	Zfp7	NP_666021.1	ILMN_2463901	002260092	S	2632	GGTAATTTATGCTATCAGAGACTTGAGGATGCTAGGAAGATTCAGATTTG	15	+	76722685-76722734	15qD3	Mus musculus zinc finger protein 7 (Zfp7), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Zfp80; MGC6397; Zfp-7; mszf73-2; KRAB7; Zfp86-rs1; Zfp65; Krox-2; KRAB20	Zfp80; MGC6397; Zfp-7; mszf73-2; KRAB7; Zfp86-rs1; Zfp65; Krox-2; KRAB20
Mus musculus	RefSeq	ILMN_199700	ILMN_199700	LOC383837	XM_357285.1	XM_357285.1			38076240	XM_357285.1	LOC383837		ILMN_1225700	006060678	S	291	CCTAGCCGTGAGGAAGCTCCAAGAGAACTGCAAGGACATTTTGTCTGTCA										
Mus musculus	RefSeq	ILMN_189009	ILMN_324945	MAML2	XM_001481278.1	XM_001481278.1		270118	149259825	XM_001481278.1	Maml2	XP_001481328.1	ILMN_2457571	000770347	S	5832	GTCACCTGCATTGCTGTCCTGAACCCACGAATGTAAAGATTTCAACTTGT	9	+	13513736-13513785	9qA1	PREDICTED: Mus musculus mastermind like 2 (Drosophila) (Maml2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISA]		
Mus musculus	RefSeq	ILMN_186398	ILMN_186398	TMEM14C	NM_025387.1	NM_025387.1		66154	13384765	NM_025387.1	Tmem14c	NP_079663.1	ILMN_2849680	003710072	S	770	GTGGGGGCAGAGCTGTGCGTCCTGCCCAGAAGTGTGTGAAATCTCTTGGA	13	+	41033416-41033465	13qA3.3	Mus musculus transmembrane protein 14C (Tmem14c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			HSPC194; 1110021D01Rik; AU020193	HSPC194; 1110021D01Rik; AU020193
Mus musculus	RefSeq	ILMN_218386	ILMN_218386	HBA-X	NM_010405.3	NM_010405.3		15126	142350815	NM_010405.3	Hba-x	NP_034535.1	ILMN_1240267	007510201	S	214	ATGGGTCTCAGCAGTTGCGGGCCCACGGCTTCAAGATCATGACCGCCGTA	11	+	32176693-32176698:32176664-32176707	11qA4	Mus musculus hemoglobin X, alpha-like embryonic chain in Hba complex (Hba-x), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IEA]	The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	AI450015	AI450015
Mus musculus	RefSeq	ILMN_223214	ILMN_223214	COL1A2	NM_007743.2	NM_007743.2		12843	111120328	NM_007743.2	Col1a2	NP_031769.2	ILMN_1253806	002690619	S	4241	TGGCCCCGTCTGTTTCAAATAAGTGAACTCAACCTAAATTAAAAACCAAA	6	+	4490641-4490662:4490663-4490690	6qA1	Mus musculus collagen, type I, alpha 2 (Col1a2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A collagen heterotrimer containing two alpha1(I) chains and one alpha2(I) chain; type I collagen triple helices associate to form banded fibrils [goid 5584] [evidence IDA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]	oim; Cola2; Col1a-2; AA960264; Cola-2; AI325291	oim; Cola2; Col1a-2; AA960264; Cola-2; AI325291
Mus musculus	RefSeq	ILMN_197985	ILMN_197985	LOC224163	XM_147236.2	XM_147236.2			38079951	XM_147236.2	LOC224163		ILMN_1224158	001740706	S	441	TCCCGTTGCCGTCTCTGTGGATGAGATTATACGACTAGTCCAGGCCTTCC										
Mus musculus	MEEBO	ILMN_219284	ILMN_219284	1500041B16RIK	scl070255.1_21	XM_354599.1			38091305	XM_354599.1	1500041B16Rik		ILMN_1218353	005890209	S	405	AGAACCGCACAATCAAGCTGCTCACCGGCTCCTCCTACAAGGTGGAGGTG										
Mus musculus	RefSeq	ILMN_234095	ILMN_234095	ACSBG2	NM_001039114.1	NM_001039114.1		328845	84993735	NM_001039114.1	Acsbg2	NP_001034203.1	ILMN_2842155	004260451	S	2536	GTGAACACCCAGAGCCCAAAACACCTTCCTGGGAGCAGCATGGAAACCCC	17	-	56982549-56982598	17qD	Mus musculus acyl-CoA synthetase bubblegum family member 2 (Acsbg2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IDA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence ISO]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IC ]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IDA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence ISO]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence ISO]		
Mus musculus	RefSeq	ILMN_216760	ILMN_216760	9130213B05RIK	NM_145562.2	NM_145562.2		231440	118130163	NM_145562.2	9130213B05Rik	NP_663537.1	ILMN_1237546	004150471	S	1533	ATATCAGTGAGGAGAAAGGAACGCATCCCGGGCGACTGCCACTCTGTGTG	5	+	92052470-92052519	5qE2	Mus musculus RIKEN cDNA 9130213B05 gene (9130213B05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			W91666; 2210012L08Rik	W91666; 2210012L08Rik
Mus musculus	RefSeq	ILMN_216760	ILMN_216760	9130213B05RIK	NM_145562.2	NM_145562.2		231440	118130163	NM_145562.2	9130213B05Rik	NP_663537.1	ILMN_2756704	002230026	S	1989	TTGGAGGGACCCATAGAACTCTCGCTCCACACCTATAAAGCAGCAACTGC	5	+	92052926-92052975	5qE2	Mus musculus RIKEN cDNA 9130213B05 gene (9130213B05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			W91666; 2210012L08Rik	W91666; 2210012L08Rik
Mus musculus	Riken	ILMN_205125	ILMN_205125	HSF2	ri|E230008I10|PX00209E13|AK053976|2696					AK053976	Hsf2		ILMN_1218155	006580592	S	2526	AATGGTCAGGTTTCTGTACCAGGGTGGAGTCAGCAGGAGGGTATCAGGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_212159	ILMN_212159	GPR149	scl22108.4.1_324	NM_177346.1			33859804	NM_177346.1	Gpr149		ILMN_1241369	005910333	S	2516	CGTGCTCTTAGATTGTGCATACGTGCAGTTCAGGCACATCTGATGTTTAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185339	ILMN_185339	ZFP261	scl0002935.1_1				9790026	NM_019831	Zfp261		ILMN_2426223	003060538	S	5	ATTTGAATGAGAGGAGGGGATCACGGGTAGAGTGGGCTCTGGAGATAGGG										
Mus musculus	MEEBO	ILMN_216251	ILMN_216251	MCPT6	scl50983.6.1_181	NM_010781.1			6857813	NM_010781.1	Mcpt6		ILMN_2668986	000770400	S	869	TCCTTAGTTTTCATTTTTAATGTCAAACATAACAGACTCATCCATCACAA										
Mus musculus	Riken	ILMN_205091	ILMN_205091	AVPR2	ri|D630034C19|PX00197K13|AK052712|2209					AK052712	Avpr2		ILMN_1252433	006620373	S	1488	GGGGGAGGTAAGGGGCTCCCCCAACACATTGAAATACTCTACTTGCTACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IMP]; The appearance of interferon-gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon-gamma is also known as type II interferon [goid 32609] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186175	ILMN_235146	PNRC1	NM_001033225.2	NM_001033225.2		108767	113461981	NM_001033225.2	Pnrc1	NP_001028397.2	ILMN_1247669	000670332	S	1844	TCTAATTTTAAATACCAACAAAATTGGTTGTAATCAAATTTTAAATCAAT	4	-	33332429-33332478	4qA5	Mus musculus proline-rich nuclear receptor coactivator 1 (Pnrc1), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Prol2; B4-2; PRR2; 5730463C12Rik	Prol2; B4-2; PRR2; 5730463C12Rik
Mus musculus	MEEBO	ILMN_186563	ILMN_186563	4930563A19RIK	scl50892.1.1_13						4930563A19Rik		ILMN_2436592	004920463	S	14	TGGGGTCGAGAACAGGCACTGTCCCAGTTAAGGGTCTATCAGAGACGGAG										
Mus musculus	Riken	ILMN_206148	ILMN_206148	C130015E15RIK	ri|C130015E15|PX00167H07|AK081413|2803					AK081413	C130015E15Rik		ILMN_1233652	001690608	S	2685	CAGCACATGGGAAAGGGAGGCAAGTGGATTTCTTTGAGTACAGGTCTCCC										
Mus musculus	Riken	ILMN_203109	ILMN_203109	B4GALT1	ri|4833443M22|PX00029I05|AK029474|1198					AK029474	B4galt1		ILMN_2554782	006840601	S	1082	ATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCGAGATGTGAGCGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IMP]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IGI]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [evidence IMP]; Inflammation which comprises a rapid, short-lived, relatively uniform response to acute injury or antigenic challenge and is characterized by accumulations of fluid, plasma proteins, and granulocytic leukocytes. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response [goid 2526] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to a damaged tissue, following an injury [goid 60055] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation, contributing to the restoration of integrity to a damaged tissue following an injury [goid 60054] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis of mammary epithelial cells during mammary gland involution [goid 60058] [evidence IMP]; The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [evidence IDA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IDA]; The process whose specific outcome is the progression of the secondary sexual characteristics over time, from their formation to the mature structures. In humans, these include growth of axillary, chest, and pubic hair, voice changes, testicular/penile enlargement, breast development and menstrual periods. Development occurs in response to sex hormone secretion [goid 45136] [evidence IMP]; Any process that modulates the frequency, rate or extent of the movement of a cell [goid 51270] [evidence IDA]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IPI]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The glycosylation of a nitrogen atom of a free alpha amino terminal of a peptide [goid 6496] [evidence IMP]; The chemical reactions and pathways resulting in the formation of lactose, the disaccharide galactopyranosyl-glucose [goid 5989] [evidence IMP]; The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2064] [evidence IMP]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IPI]; Any process that modulates the frequency, rate or extent of the acrosome reaction [goid 60046] [evidence IMP]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [evidence IMP]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-galactose + D-glucose = UDP + lactose [goid 4461] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IDA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IMP]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine [goid 3945] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IDA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IDA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187614	ILMN_246840	4933411K16RIK	XM_894441.2	XM_894441.2		66765	94405931	XM_894441.2	4933411K16Rik	XP_899534.1	ILMN_2445637	002900601	S	1418	GGCCCTGATGACCCACGAGAGAAGACAGGAGGCAGATTACAGGAGCAACC	19	+	42128010-42128059	19qC3	PREDICTED: Mus musculus RIKEN cDNA 4933411K16 gene (4933411K16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211317	ILMN_211317	TMEM45A	NM_019631.2	NM_019631.2		56277	31542277	NM_019631.2	Tmem45a	NP_062605.2	ILMN_2982662	004050427	S	2417	TCTGTGACTGCCACATTTGAGCTTCAAAGGAACCAGGAATCAGCCTCAGC	16	-	56730343-56730392	16qC1.1	Mus musculus transmembrane protein 45a (Tmem45a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]			p19.5; M32486; C630002M10Rik	p19.5; M32486; C630002M10Rik
Mus musculus	RefSeq	ILMN_211317	ILMN_211317	TMEM45A	NM_019631.2	NM_019631.2		56277	31542277	NM_019631.2	Tmem45a	NP_062605.2	ILMN_2982663	000020671	S	2307	GTGAGTGTACTCCAGGATACAAGGTACCGATATGTCATGGTCCTCTGACG	16	-	56730453-56730502	16qC1.1	Mus musculus transmembrane protein 45a (Tmem45a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]			p19.5; M32486; C630002M10Rik	p19.5; M32486; C630002M10Rik
Mus musculus	RefSeq	ILMN_237558	ILMN_237558	WWP1	NM_177327.3	NM_177327.3		107568	112734835	NM_177327.3	Wwp1	NP_796301.2	ILMN_3005669	002760689	S	3633	CGTGTGATAGATCCAGTCGTGTCTAGGAGCAGCTGGGATTGACTTGCTGC	4	-	19538207-19538256	4qA3	Mus musculus WW domain containing E3 ubiquitin protein ligase 1 (Wwp1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]	SDRP1; Tiul1; AIP5; 8030445B08Rik	SDRP1; Tiul1; AIP5; 8030445B08Rik
Mus musculus	RefSeq	ILMN_197222	ILMN_237558	WWP1	NM_177327.3	NM_177327.3		107568	112734835	NM_177327.3	Wwp1	NP_796301.2	ILMN_1254720	000150750	S	2652	GAGGTTATGCTGTGTGGCATGCAAGAGGTTGACTTGGCAGACTGGCAGAG	4	-	19549132-19549179:19550249-19550250	4qA3	Mus musculus WW domain containing E3 ubiquitin protein ligase 1 (Wwp1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]	SDRP1; Tiul1; AIP5; 8030445B08Rik	SDRP1; Tiul1; AIP5; 8030445B08Rik
Mus musculus	RefSeq	ILMN_186447	ILMN_237558	WWP1	NM_177327.3	NM_177327.3		107568	112734835	NM_177327.3	Wwp1	NP_796301.2	ILMN_2461535	000380678	S	3484	TTCCTTCCTGAACAGCCATGCAGCTAACACAATCCAATGTCACCTAGGGA	4	-	19538356-19538405	4qA3	Mus musculus WW domain containing E3 ubiquitin protein ligase 1 (Wwp1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]	SDRP1; Tiul1; AIP5; 8030445B08Rik	SDRP1; Tiul1; AIP5; 8030445B08Rik
Mus musculus	RefSeq	ILMN_221892	ILMN_221892	TM2D1	NM_053157.2	NM_053157.2		94043	60097933	NM_053157.2	Tm2d1	NP_444387.1	ILMN_2741689	002600685	S	594	ACCAGGCTTACAAGACTCAGCATTACTAATGAAACATTTAGAAAAACCCA	4	-	98024640-98024689	4qC6	Mus musculus TM2 domain containing 1 (Tm2d1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]	Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [evidence IPI]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IDA]	Bbp; 2310026L18Rik; AA990549	Bbp; 2310026L18Rik; AA990549
Mus musculus	Riken	ILMN_207205	ILMN_207205	C030011I11RIK	ri|C030011I11|PX00665P11|AK081222|3569					AK081222	C030011I11Rik		ILMN_1258032	004560360	S	3052	CTCCCCTGGAACGGAAGCTCAGTAGAAGGTCCCATCTTGTGTTAGCACCC										
Mus musculus	Riken	ILMN_204179	ILMN_204179	TIEG	ri|A730095A08|PX00153O17|AK043433|2144					AK043433	Tieg		ILMN_1238766	000130554	S	2011	GCTGACTCACTCACAGCAGAGCATCTCCACCAGAGAGCAGAGGAAGTATC										
Mus musculus	RefSeq	ILMN_208625	ILMN_318429	LOC100038908	XM_001471664.1	XM_001471664.1		100038908	149256069	XM_001471664.1	LOC100038908	XP_001471714.1	ILMN_1218833	005340324	S	1127	TTCACCAGCTCACTGGACACAGAGCATATATCTTCTAGTAGACAGTACCG	7	-	3846793-3846842	7qA1	PREDICTED: Mus musculus hypothetical protein LOC100038908 (LOC100038908), mRNA.					
Mus musculus	RefSeq	ILMN_207462	ILMN_318429	LOC100038908	XM_001471664.1	XM_001471664.1		100038908	149256069	XM_001471664.1	LOC100038908	XP_001471714.1	ILMN_2691049	002510296	S	1588	GGAGCTCACAGTCTCAGCCACAGAGAACCAGGATCACACAATGGAGAATC	7	-	3835996-3836029:3845583-3845598	7qA1	PREDICTED: Mus musculus hypothetical protein LOC100038908 (LOC100038908), mRNA.					
Mus musculus	RefSeq	ILMN_197538	ILMN_232985	LOC629763	XM_894685.1	XM_894685.1		629763	82954472	XM_894685.1	LOC629763	XP_899778.1	ILMN_1258553	001300458	S	127	GGGTACAGAGGGTGGACCTGTAAAACTGACACTGATTCCTGTGGAGGGAG	14	+	80573550-80573599		PREDICTED: Mus musculus similar to Crumbs homolog 1 precursor (LOC629763), mRNA.					
Mus musculus	Riken	ILMN_204084	ILMN_204084	A730042M21RIK	ri|A730042M21|PX00150H01|AK042950|2313					AK042950	A730042M21Rik		ILMN_1247944	004560301	S	1769	CCCAGGACTTGGCACTCACTCCTATGGTGCTATCCTATGGCCTCAAGCCT										
Mus musculus	Riken	ILMN_202566	ILMN_202566	2900009I07RIK	ri|2900009I07|ZX00068I11|AK013505|1698					AK013505	2900009I07Rik		ILMN_1230407	000150609	S	1448	GGCCAAAGAGGAGGTTGATTTACACTAGGACAGAATCGGGGAGGGCCAAG										
Mus musculus	Riken	ILMN_205638	ILMN_205638	ZFP46	ri|E130118L06|PX00092H21|AK053652|3100					AK053652	Zfp46		ILMN_2574108	005310131	S	144	CGTTGCACGTACTCGATATTAACCGAGACACGGAGAGTGGGTGACTCTTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216064	ILMN_216064	KCTD18	NM_030211.1	NM_030211.1		51960	29336038	NM_030211.1	Kctd18	NP_084487.1	ILMN_2666893	004670347	S	2320	GCATTGTTGCATATGCCCTGGTTAGCAACCACCAGCTGTCTAGTTCCAAC	1	-	57904837-57904886	1qC1.3	Mus musculus potassium channel tetramerisation domain containing 18 (Kctd18), mRNA.				4932411A20Rik; 6530404F10Rik	4932411A20Rik; 6530404F10Rik
Mus musculus	MEEBO	ILMN_187925	ILMN_187925	CCND2	scl28385.5_137				34328162	NM_009829	Ccnd2		ILMN_2700168	001260324	S	1783	GCCAGTTGGACACAGGTGAACGGCTCCTAAGTCTCATGTTTGGTGAATTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_251990	ILMN_251990	ZFP213	NM_001033496.2	NM_001033496.2		449521	142372179	NM_001033496.2	Zfp213	NP_001028668.1	ILMN_3160203	002450768	S	2178	GGGTTCCAGCACAGTGGCTTCTTGGCCGTCAGTGTTATCCAGTACCCTTC	17	-	23694083-23694132	17qA3.3	Mus musculus zinc finger protein 213 (Zfp213), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC038178	BC038178
Mus musculus	RefSeq	ILMN_220436	ILMN_220436	TCFE3	NM_172472.2	NM_172472.2		209446	145301570	NM_172472.2	Tcfe3	NP_766060.1	ILMN_2721982	001820450	S	2621	GGCAGGGCCTGGGAGGAATGGTGGCAAAGGTATAATGTATCCGTGTTTTG				XqA1.1	Mus musculus transcription factor E3 (Tcfe3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of osteoclast differentiation [goid 45670] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Tfe-3; AI851540; Tfe3; F830016E06Rik	Tfe-3; AI851540; Tfe3; F830016E06Rik
Mus musculus	RefSeq	ILMN_211935	ILMN_211935	MAL	NM_010762.4	NM_010762.4		17153	141801061	NM_010762.4	Mal	NP_034892.1	ILMN_1248947	000380259	S	2595	CAACAAAGCTGAACCCTAACATTACACTAACCAGCAGCTCAACACGAGTG	2	-	127459095-127459144	2qF1	Mus musculus myelin and lymphocyte protein, T-cell differentiation protein (Mal), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]		VIP17; MPV17	VIP17; MPV17
Mus musculus	RefSeq	ILMN_211935	ILMN_211935	MAL	NM_010762.4	NM_010762.4		17153	141801061	NM_010762.4	Mal	NP_034892.1	ILMN_1224029	004780010	S	754	GGCCACCACTTCCCTGATGATCTTGTACATAATTGGTACTCATGGCGGTG	2	-	127465976-127466025	2qF1	Mus musculus myelin and lymphocyte protein, T-cell differentiation protein (Mal), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]		VIP17; MPV17	VIP17; MPV17
Mus musculus	RefSeq	ILMN_209549	ILMN_209549	NME1	NM_008704.2	NM_008704.2		18102	38327645	NM_008704.2	Nme1	NP_032730.1	ILMN_1221067	002070520	S	851	CCTGGAAGGAACCTTTGGGAGCTGTGACTCCCTGTGCAGTGTTACGTGCC	11	-	93820573-93820622	11qD	Mus musculus non-metastatic cells 1, protein (NM23A) expressed in (Nme1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NM23-M1; AL024257; NDPK-A; NM23A	NM23-M1; AL024257; NDPK-A; NM23A
Mus musculus	RefSeq	ILMN_219319	ILMN_219319	MAP3K7	NM_172688.2	NM_172688.2		26409	141802561	NM_172688.2	Map3k7	NP_766276.1	ILMN_2707188	006860736	S	2746	GGTCTGTTATACCAAATAAGGAACACAGCAGGCTAATCAGGAGGCCCGAG	4	+	32107521-32107570	4qA5	Mus musculus mitogen-activated protein kinase kinase kinase 7 (Map3k7), mRNA.		Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The process of introducing a phosphate group into an I-kappaB protein [goid 7252] [evidence IGI]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IGI]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	B430101B05; Tak1; C87327	B430101B05; Tak1; C87327
Mus musculus	RefSeq	ILMN_247290	ILMN_247290	CLEC16A	NM_177562.4	NM_177562.4		74374	118130442	NM_177562.4	Clec16a	NP_808230.2	ILMN_2850057	005690040	S	6019	GCTGAAGCTGTGAGGAAAAAAGAGGGGGAGGGGGCAGAACTGGGAAGGTC	16	+	10744794-10744843	16qA1	Mus musculus C-type lectin domain family 16, member A (Clec16a), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	AW742259; KIAA0350; 4932416N17Rik; mKIAA0350	AW742259; KIAA0350; 4932416N17Rik; mKIAA0350
Mus musculus	RefSeq	ILMN_189551	ILMN_247290	CLEC16A	NM_177562.4	NM_177562.4		74374	118130442	NM_177562.4	Clec16a	NP_808230.2	ILMN_2511806	005090739	S	5805	AGAGGCTTCACCTGCTACTCTACCCACCAAACACTTGCATTGGCAGGAGT	16	+	10744580-10744629	16qA1	Mus musculus C-type lectin domain family 16, member A (Clec16a), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	AW742259; KIAA0350; 4932416N17Rik; mKIAA0350	AW742259; KIAA0350; 4932416N17Rik; mKIAA0350
Mus musculus	RefSeq	ILMN_216330	ILMN_241437	SFRS17B	NM_001081956.1	NM_001081956.1		338351	126432545	NM_001081956.1	Sfrs17b	NP_001075425.1	ILMN_1236157	005890670	S	5799	GGGCCTGACGTTGTTTTATTTAAAGAGGGGTTTCCGTGCGCTTCCCTTGT	X	-	34148482-34148531	XqA3.3	Mus musculus splicing factor, arginine/serine-rich 17b (Sfrs17b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C230056F04Rik; AA407619; Talia; B230333C21Rik	C230056F04Rik; AA407619; Talia; B230333C21Rik
Mus musculus	Riken	ILMN_205061	ILMN_205061	D230003C14RIK	ri|D230003C14|PX00187I08|AK051810|3261					AK051810	D230003C14Rik		ILMN_1259746	004570600	S	3060	CCCTGTGCTTTGAAGACACTCGGCTGCACAGACCTCTTCTGTGGGAAGCA										
Mus musculus	RefSeq	ILMN_222425	ILMN_222425	RHOC	NM_007484.1	NM_007484.1		11853	6680727	NM_007484.1	Rhoc	NP_031510.1	ILMN_2790097	003120176	S	586	GAAGAATAAGCGCCGGAGGGGCTGTCCCATTCTCTGACTTCCCCAAAGCT	3	+	104596925-104596961:104596962-104596974	3qF2.2	Mus musculus ras homolog gene family, member C (Rhoc), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI324259; Arhc; Arh9	AI324259; Arhc; Arh9
Mus musculus	RefSeq	ILMN_222425	ILMN_222425	RHOC	NM_007484.1	NM_007484.1		11853	6680727	NM_007484.1	Rhoc	NP_031510.1	ILMN_2749437	001500743	S	370	CCCATCATCCTAGTGGGGAATAAAAAGGACCTGAGGCAAGATGAGCATAC	3	+	104595870-104595919	3qF2.2	Mus musculus ras homolog gene family, member C (Rhoc), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI324259; Arhc; Arh9	AI324259; Arhc; Arh9
Mus musculus	Riken	ILMN_207017	ILMN_207017	8030489M13RIK	ri|8030489M13|PX00651C05|AK078791|1055					AK078791	8030489M13Rik		ILMN_1231301	002760224	S	624	ATTCAGCAGCGCCGCACCGTTGCCATTCGGTAGCTCGTCCATAGCGGGGC										
Mus musculus	RefSeq	ILMN_203781	ILMN_259610	SCN2A1	XM_980330.1	XM_980330.1		110876	94366559	XM_980330.1	Scn2a1	XP_985424.1	ILMN_1214686	002750156	S	6959	CCCAAACTACCAAAAACCATCCCCACAGCCACTTTCTGAAGTTGGTTCTG				2qC1.3	PREDICTED: Mus musculus sodium channel, voltage-gated, type II, alpha 1 (Scn2a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; Specialised type of cell-cell junction in cardiac muscle, which mediates mechanical and electrochemical integration between the individual cardiomyocytes. Consist of three different kinds of substructures: adherens junctions, desmosomes and gap junctions [goid 14704] [evidence IDA]; A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence IDA]		
Mus musculus	RefSeq	ILMN_203126	ILMN_259610	SCN2A1	XM_980330.1	XM_980330.1		110876	94366559	XM_980330.1	Scn2a1	XP_985424.1	ILMN_1222355	002370170	S	7333	GGGAAGCCATATGTCAGAGGTGGAGTGAAGTGGATTGTTCCATCAGGAAC				2qC1.3	PREDICTED: Mus musculus sodium channel, voltage-gated, type II, alpha 1 (Scn2a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; Specialised type of cell-cell junction in cardiac muscle, which mediates mechanical and electrochemical integration between the individual cardiomyocytes. Consist of three different kinds of substructures: adherens junctions, desmosomes and gap junctions [goid 14704] [evidence IDA]; A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196418	ILMN_259610	SCN2A1	XM_980330.1	XM_980330.1		110876	94366559	XM_980330.1	Scn2a1	XP_985424.1	ILMN_2524087	004810440	S	6201	TGTTTTCGCAACCAGCTGACACTGCTGAAGAGTGGAGGAGAGCAATGGCT				2qC1.3	PREDICTED: Mus musculus sodium channel, voltage-gated, type II, alpha 1 (Scn2a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; Specialised type of cell-cell junction in cardiac muscle, which mediates mechanical and electrochemical integration between the individual cardiomyocytes. Consist of three different kinds of substructures: adherens junctions, desmosomes and gap junctions [goid 14704] [evidence IDA]; A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223036	ILMN_223036	PITPNM1	NM_008851.1	NM_008851.1		18739	6679338	NM_008851.1	Pitpnm1	NP_032877.1	ILMN_2794116	004390327	S	4245	GGCCAGGGGCAAGACTCGCAGCATCAGCCTCAAGTTGGACAGTGAAGAGT	19	+	4113698-4113747	19qA	Mus musculus phosphatidylinositol membrane-associated 1 (Pitpnm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence ISA]	RdgB; R75447; mpt-1; Rd9; Pitpnm; DRES9	RdgB; R75447; mpt-1; Rd9; Pitpnm; DRES9
Mus musculus	RefSeq	ILMN_200373	ILMN_200373	LOC386360	XM_359184.1	XM_359184.1			38081460	XM_359184.1	LOC386360		ILMN_2538531	004900025	S	32	ATAGGAACCAAGACCACTCACCATCATCAGAACCCAGCACTCCCACTTCG										
Mus musculus	MEEBO	ILMN_194332	ILMN_194332	SCL000911.1_939	scl000911.1_939	BC069970.1			47122771	BC069970.1	scl000911.1_939		ILMN_1238029	007330181	S	12	TCCGGGTGCGGCCGTTCAGCCAGGTCAGTCCATGCTCATTGCCTTGCTGA										
Mus musculus	RefSeq	ILMN_197482	ILMN_326247	LOC545500	XR_031642.1	XR_031642.1		545500	149250575	XR_031642.1	LOC545500		ILMN_1243069	003360014	S	1835	GCCAGAGCCACTGAATGAGAAGGAAGCAAGGGGGACGGCTGAAAATTATG				3qA1	PREDICTED: Mus musculus similar to ubiquitin specific protease 1 (LOC545500), misc RNA.					
Mus musculus	RefSeq	ILMN_253448	ILMN_253448	GM1527	NM_001033479.1	NM_001033479.1		385263	85702002	NM_001033479.1	Gm1527	NP_001028651.1	ILMN_3064066	005560148	I	1918	GTCGACCCTTGTATTTCAATGTTCCCTTCTACCTCCCACTCAAAGAAGGC	3	+	29117595-29117644	3qA3	Mus musculus gene model 1527, (NCBI) (Gm1527), mRNA.					
Mus musculus	RefSeq	ILMN_211866	ILMN_211866	FMO5	NM_010232.3	NM_010232.3		14263	46849767	NM_010232.3	Fmo5	NP_034362.2	ILMN_2620233	004560300	S	1380	CTATATAGACACCATGGAAGAGATTGCAGATTTAGTGGGTGTCAGGCCCA	3	+	97455441-97455490	3qF2.2	Mus musculus flavin containing monooxygenase 5 (Fmo5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	5033418D19Rik; AI195026	5033418D19Rik; AI195026
Mus musculus	RefSeq	ILMN_211866	ILMN_211866	FMO5	NM_010232.3	NM_010232.3		14263	46849767	NM_010232.3	Fmo5	NP_034362.2	ILMN_1230890	005220477	S	2067	GCAGGGTTCTTTTAATGCTTGACTCTGTTGTGTTTCTAGCACTGCACAGC	3	+	97456128-97456177	3qF2.2	Mus musculus flavin containing monooxygenase 5 (Fmo5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	5033418D19Rik; AI195026	5033418D19Rik; AI195026
Mus musculus	RefSeq	ILMN_221349	ILMN_221349	OLFR868	NM_146559.1	NM_146559.1		258552	22129518	NM_146559.1	Olfr868	NP_666770.1	ILMN_2734325	001050500	S	559	CTTCTAAATTTAAGTTGCAACAACACATTTAATAATAACATACTCATGTA	9	+	19905763-19905812	9qA3	Mus musculus olfactory receptor 868 (Olfr868), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR145-4	MOR145-4
Mus musculus	RefSeq	ILMN_201531	ILMN_201531	SLFN8	NM_181545.3	NM_181545.3		276950	142380410	NM_181545.3	Slfn8	NP_853523.1	ILMN_2596730	003840491	S	3428	AATATTGTATACAGTTAAAGAAAAAGACTAAAAACACAATATTAAGTAGT	11	-	82816193-82816242	11qC	Mus musculus schlafen 8 (Slfn8), mRNA.				MGC30719	MGC30719
Mus musculus	RefSeq	ILMN_211206	ILMN_211206	2010001M09RIK	NM_027222.2	NM_027222.2		69816	141803335	NM_027222.2	2010001M09Rik	NP_081498.1	ILMN_2613601	007210672	S	577	CCTGGCCCAGAGAGAAGAGCTTTAGTCCAACCTGCTGCACTTCTGGATCT	18	-	35807198-35807223:35807224-35807247	18qB2	Mus musculus RIKEN cDNA 2010001M09 gene (2010001M09Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		MGC73549; AV064572	MGC73549; AV064572
Mus musculus	RefSeq	ILMN_213945	ILMN_213945	GRIN3B	NM_130455.2	NM_130455.2		170483	53759069	NM_130455.2	Grin3b	NP_569722.1	ILMN_1229979	003460639	S	3173	GCCCGCCGAGAGCTGAGGAACTACACGGCCACACTGTCCACGACAGTTTA	10	+	79439834-79439849:79439850-79439883	10qC1	Mus musculus glutamate receptor, ionotropic, NMDA3B (Grin3b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IMP]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD [goid 17146] [evidence IMP]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence IMP]; The process by which a protein is incorporated into a biological membrane [goid 51205] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP]	NR3B	NR3B
Mus musculus	RefSeq	ILMN_208644	ILMN_208644	BID	NM_007544.3	NM_007544.3		12122	77404282	NM_007544.3	Bid	NP_031570.2	ILMN_3161878	005700575	S	1615	TGTGCTGAACTTTGCTTAAAGCTGGGATCGTCAGCACGAGCCGCCACAGC	6	-	120843867-120843916	6qF1	Mus musculus BH3 interacting domain death agonist (Bid), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI875481; AU022477; 2700049M22Rik	AI875481; AU022477; 2700049M22Rik
Mus musculus	RefSeq	ILMN_215738	ILMN_215738	D930020E02RIK	NM_173420.2	NM_173420.2		239167	142387160	NM_173420.2	D930020E02Rik	NP_775596.1	ILMN_2663033	000620450	S	2750	GGAATGTTTTCAGTGCCCTGCCTGTAGGTGGAGAGTGGGCTCTCTTATAC	14	-	69908656-69908705	14qD2	Mus musculus RIKEN cDNA D930020E02 gene (D930020E02Rik), mRNA.	The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215611	ILMN_215611	MAPK3	NM_011952.2	NM_011952.2		26417	93102422	NM_011952.2	Mapk3	NP_036082.1	ILMN_1218551	004880128	S	1265	AGCCCAGGCTGGACCAAGGGTGGGCCTGGCCACCTTCTCTCACTTTGCTG	7	+	133908823-133908872	7qF3	Mus musculus mitogen-activated protein kinase 3 (Mapk3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence TAS]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IMP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IPI]; Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IMP]	p44; p44erk1; Erk-1; Erk1; Esrk1; Prkm3; p44mapk	p44; p44erk1; Erk-1; Erk1; Esrk1; Prkm3; p44mapk
Mus musculus	RefSeq	ILMN_199661	ILMN_199661	LOC382854	XM_356712.1	XM_356712.1			38075711	XM_356712.1	LOC382854		ILMN_2536034	000520594	S	8	TACTGCCCAAGCTAAAGGTTCTGCCTCTCCTTCAAGAAGCATTTAGGGCC										
Mus musculus	MEEBO	ILMN_186854	ILMN_186854	HIST1H4H	scl44214.2.4_53				23943921	NM_153173	Hist1h4h		ILMN_2439060	000380608	S	2	GTCATCTGAGCATCCAAGCTGCTTTTCAAGAAATCTCCAATTCCAGGAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215048	ILMN_215048	PEX2	NM_008994.2	NM_008994.2		19302	21687247	NM_008994.2	Pex2	NP_033020.2	ILMN_1253995	004780743	S	1506	GTCATCCTCAGTGTCATCTGTAGGTGGCTTTTAACAGGAGTGTGCTGTAC	3	-	5560725-5560774	3qA1	Mus musculus peroxisome biogenesis factor 2 (Pex2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	35kDa; PMP35; PEX2; D3Ertd138e	35kDa; PMP35; PEX2; D3Ertd138e
Mus musculus	RefSeq	ILMN_215048	ILMN_215048	PEX2	NM_008994.2	NM_008994.2		19302	21687247	NM_008994.2	Pex2	NP_033020.2	ILMN_1243221	000650681	S	101	GAAAACCCACTGATGAGCTAACCAAGGATACATTCCAGCAACTCCTGCTG	3	-	5570570-5570619	3qA1	Mus musculus peroxisome biogenesis factor 2 (Pex2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	35kDa; PMP35; PEX2; D3Ertd138e	35kDa; PMP35; PEX2; D3Ertd138e
Mus musculus	RefSeq	ILMN_192283	ILMN_248666	PRPF31	NM_027328.3	NM_027328.3		68988	141802632	NM_027328.3	Prpf31	NP_081604.2	ILMN_2754225	000070201	S	2011	TCTAACACCATCACCTGCCCCATGAGAACATCAGCATCATGGCCACCACA	7	+	3592955-3593004	7qA1	Mus musculus PRP31 pre-mRNA processing factor 31 homolog (yeast) (Prpf31), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISA]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [evidence ISA]; A complex composed of three small nuclear ribonucleoproteins, snRNP U4, snRNP U6 and snRNP U5 [goid 46540] [evidence ISA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The formation of a tri-snRNP complex containing U4 and U6 (or U4atac and U6atac) snRNAs and U5 snRNAs and associated proteins. This includes reannealing of U4 and U6 (or U4atac and U6atac) snRNAs released from previous rounds of splicing to reform the U4/U6 snRNP (or U4atac/U6atac snRNP) as well as the subsequent association of the U5 snRNP with the U4/U6 snRNP (or U4atac/U6atac snRNP) to form a tri-snRNP that is ready to reassemble into another spliceosome complex [goid 244] [evidence ISA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISA]	Interacting selectively with any complex of RNA and protein [goid 43021] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	2810404O06Rik; PRP31; 1500019O16Rik; RP11; AW554706	2810404O06Rik; PRP31; 1500019O16Rik; RP11; AW554706
Mus musculus	RefSeq	ILMN_205227	ILMN_313633	LOC100047194	XM_001477622.1	XM_001477622.1		100047194	149253197	XM_001477622.1	LOC100047194	XP_001477672.1	ILMN_1252127	000610450	S	431	TATCATAGTGCCTACGCAGCAGCAGCCCCCTCCAGCCAAGAGAGAGAAAA					PREDICTED: Mus musculus similar to Eukaryotic translation initiation factor 4 gamma 3 (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII) (LOC100047194), mRNA.					
Mus musculus	RefSeq	ILMN_205353	ILMN_313633	LOC100047194	XM_001477622.1	XM_001477622.1		100047194	149253197	XM_001477622.1	LOC100047194	XP_001477672.1	ILMN_1217481	000460296	S	307	CACAGCAGTATCCAGTTCAGCCGCCTGGGCCGGGGCCTTTTTATCCTGGA					PREDICTED: Mus musculus similar to Eukaryotic translation initiation factor 4 gamma 3 (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII) (LOC100047194), mRNA.					
Mus musculus	RefSeq	ILMN_214364	ILMN_214364	CPSF4L	NM_029794.1	NM_029794.1		52670	21536231	NM_029794.1	Cpsf4l	NP_084070.1	ILMN_1216905	000770382	S	119	GGGTAGTTATATCCCCACACATACAATGGGACACTGGTTTGGCAACGGCT	11	-	113571163-113571212	11qE2	Mus musculus cleavage and polyadenylation specific factor 4-like (Cpsf4l), transcript variant 2, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RP23-407I21.8; 1500000C01Rik; 0610010C04Rik	RP23-407I21.8; 1500000C01Rik; 0610010C04Rik
Mus musculus	MEEBO	ILMN_210404	ILMN_210404	PRSS7	scl0001772.1_361	NM_008941.1			6679488	NM_008941.1	Prss7		ILMN_2605300	003290671	S	4094	GAACATGTGAAAAATTTGTTCAGACACAGCTGAATTCCCCACTAAAGGCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]		
Mus musculus	Riken	ILMN_202094	ILMN_202094	ZFP64	ri|2700078A12|ZX00064E15|AK012527|1354					AK012527	Zfp64		ILMN_1226788	002650373	S	1260	CCCAGCGTTCAGAGGCAGAGACAGGAGGATTGAGAGTTCAAGGTCATCTC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196758	ILMN_196758	IAP	NM_010490.2	NM_010490.2			24475922	NM_010490.2	Iap		ILMN_1225712	006900189	S	2834	CACGGGAGCAGGTCAGGGTTGCTCTGGGTAAAAGCCTGTAAGCCTAAGAG										
Mus musculus	Riken	ILMN_201795	ILMN_201795	DAZAP1	ri|2410042M16|ZX00056O10|AK010657|816					AK010657	Dazap1		ILMN_1227087	005550072	S	745	AGGCCCCTCAGTAGGGCTCAGGTTCCCATTGACCAGTTTGACCCGGTTTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]		
Mus musculus	MEEBO	ILMN_194373	ILMN_194373	DIRAS2	scl43971.2.2_53						Diras2		ILMN_2505845	006130286	S	19	ACTCTGTGGTTACGAGGATCACCTTGTATAAGGTTCTAGTGGCAGCGATG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216398	ILMN_216398	9530009G21RIK	NM_177131.2	NM_177131.2		320305	31342875	NM_177131.2	9530009G21Rik	NP_796105.1	ILMN_2670700	000290441	S	2437	GAGCCTAACTGAAAAGAGAAATTGTTTCCCAGACTCTCAGAATTTTTGAA	10	-	53634931-53634980		Mus musculus RIKEN cDNA 9530009G21 gene (9530009G21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211926	ILMN_211926	BRCC3	NM_145956.3	NM_145956.3		210766	145301628	NM_145956.3	Brcc3	NP_666068.1	ILMN_2636303	004810273	S	628	CCTTGAATCTGCAGTAGAGCTGCCAAAAATCCTGTGTCAGGAAGAACAGG				XqA7.3	Mus musculus BRCA1/BRCA2-containing complex, subunit 3 (Brcc3), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence ISO]	Modulates the activity of an enzyme [goid 30234] [evidence ISO]	C6.1A; MGC29148	C6.1A; MGC29148
Mus musculus	RefSeq	ILMN_211926	ILMN_211926	BRCC3	NM_145956.3	NM_145956.3		210766	145301628	NM_145956.3	Brcc3	NP_666068.1	ILMN_1246488	003440114	S	3933	CACTAGCTAATGAGCCACACCTGGCACCAAGGTACTGGACTTCAAATAGT				XqA7.3	Mus musculus BRCA1/BRCA2-containing complex, subunit 3 (Brcc3), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence ISO]	Modulates the activity of an enzyme [goid 30234] [evidence ISO]	C6.1A; MGC29148	C6.1A; MGC29148
Mus musculus	MEEBO	ILMN_224231	ILMN_224231	B230369L08RIK	scl46955.19_187				34996500	NM_194342	B230369L08Rik		ILMN_1244343	007000136	S	3312	ACTTGTGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGC										
Mus musculus	RefSeq	ILMN_191573	ILMN_236726	RGS3	NM_001081650.1	NM_001081650.1		50780	126032300	NM_001081650.1	Rgs3	NP_001075119.1	ILMN_1241709	001230292	S	3634	GCCACATAAATCACGCTAAGAAGCACACAACGACTTCTTTCCTGATGGGC	4	+	62320514-62320563	4qB3	Mus musculus regulator of G-protein signaling 3 (Rgs3), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RGS3S; C2PA-RGS3; PDZ-RGS3; 4930506N09Rik; C2pa	RGS3S; C2PA-RGS3; PDZ-RGS3; 4930506N09Rik; C2pa
Mus musculus	RefSeq	ILMN_236726	ILMN_236726	RGS3	NM_001081650.1	NM_001081650.1		50780	126032300	NM_001081650.1	Rgs3	NP_001075119.1	ILMN_3132318	005690221	A	1166	CTCGCAGGAGCAGAAGAAGAGAGTGTGCTGGTGCCTGTCGGAGAACATCG	4	+	62313780-62313829	4qB3	Mus musculus regulator of G-protein signaling 3 (Rgs3), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RGS3S; C2PA-RGS3; PDZ-RGS3; 4930506N09Rik; C2pa	RGS3S; C2PA-RGS3; PDZ-RGS3; 4930506N09Rik; C2pa
Mus musculus	RefSeq	ILMN_259673	ILMN_259673	BFAR	NM_025976.1	NM_025976.1		67118	21313129	NM_025976.1	Bfar	NP_080252.1	ILMN_2987995	000630674	S	1625	GTGTCAAGGCTTCAACCAGGTCCCTCTTCCTCTGACTCTGGCACCATGCC	16	+	13615948-13615997		Mus musculus bifunctional apoptosis regulator (Bfar), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BAR; AW107665; 3010001A07Rik; AI666707; RNF47	BAR; AW107665; 3010001A07Rik; AI666707; RNF47
Mus musculus	RefSeq	ILMN_184969	ILMN_236092	MIS12	NM_025993.2	NM_025993.2		67139	142356584	NM_025993.2	Mis12	NP_080269.1	ILMN_2592174	006650097	S	2703	GGATGGAAAATTACTAAAAGGGTCGGTATAAGGGGTTTGAATGTATCCCA	11	+	70840573-70840622	11qB4	Mus musculus MIS12 homolog (yeast) (Mis12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence ISO]		AU044651; Misc12; 2510025F08Rik; RP23-83I13.9	AU044651; Misc12; 2510025F08Rik; RP23-83I13.9
Mus musculus	RefSeq	ILMN_207193	ILMN_311478	LOC100046817	XM_001476849.1	XM_001476849.1		100046817	149253722	XM_001476849.1	LOC100046817	XP_001476899.1	ILMN_1239398	004060452	S	915	GCGGCCAGAGTTTGTGCGGTGCCAGAGTCGGGATGCTCGTTTCAAGTACA					PREDICTED: Mus musculus hypothetical protein LOC100046817 (LOC100046817), mRNA.					
Mus musculus	RefSeq	ILMN_210606	ILMN_210606	5330437I02RIK	NM_177028.3	NM_177028.3		319888	118130333	NM_177028.3	5330437I02Rik	NP_796002.1	ILMN_2607333	003780537	S	2794	CTTGAAGCTCATGAGGTTTATAACGCTGTTATTCTCACGAAAGTCACGTG	18	+	65910554-65910603	18qE1	Mus musculus RIKEN cDNA 5330437I02 gene (5330437I02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_224142	ILMN_244868	LAMP1	NM_010684.2	NM_010684.2		16783	113195677	NM_010684.2	Lamp1	NP_034814.2	ILMN_1237208	001570131	S	1998	CCCCATATTTCTGTGCTCTGCCACCCGTGAGCTGCCACTTTCCTAAATAG	8	+	13175081-13175130	8qA1.1	Mus musculus lysosomal-associated membrane protein 1 (Lamp1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]			Lamp-1; AI196048; CD107a	Lamp-1; AI196048; CD107a
Mus musculus	RefSeq	ILMN_213696	ILMN_213696	FGF17	NM_008004.2	NM_008004.2		14171	31542810	NM_008004.2	Fgf17	NP_032030.1	ILMN_2812286	003360224	S	1502	GCTCCCTGAACCTCTCTGAATCTGAACCAAATAGCCAAACTCTTGGCCAG	14	-	69371420-69371469	14qD2	Mus musculus fibroblast growth factor 17 (Fgf17), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	Riken	ILMN_204440	ILMN_204440	A730067A14RIK	ri|A730067A14|PX00151B08|AK043187|1295					AK043187	A730067A14Rik		ILMN_2564994	000830725	S	1154	CCCTTAACTCTGGAAGGGAACAGAGTCTTGGGACATCCTTGTAGTAAGGA										
Mus musculus	MEEBO	ILMN_189606	ILMN_189606	2900009J06RIK	scl16341.2.6_147						2900009J06Rik		ILMN_2462737	006980341	S	8	CGGCCGCCTTCAATAGAGCAACGAGAAAGAAGTTATCTGGGGGAGACTGC										
Mus musculus	RefSeq	ILMN_216041	ILMN_216041	ABCB6	NM_023732.2	NM_023732.2		74104	31980774	NM_023732.2	Abcb6	NP_076221.1	ILMN_2833596	000830615	S	2580	AGGAAGGCACGAAGCCCTGCTGTCCCGAGGTGGCGTTTATGCCGAGATGT	1	-	75168518-75168562:75168688-75168692	1qC3	Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Abcb6), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]	1200005B17Rik	1200005B17Rik
Mus musculus	RefSeq	ILMN_200263	ILMN_200263	LOC386094	XM_359067.1	XM_359067.1			38081143	XM_359067.1	LOC386094		ILMN_2538152	006840093	S	527	ATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCGCCACTATGTTC										
Mus musculus	Riken	ILMN_204200	ILMN_204200	C820017N15RIK	ri|C820017N15|PX00088K23|AK050558|2742					AK050558	C820017N15Rik		ILMN_1232659	007150703	S	2512	GGAGAGTGTCCTGGGCTGGATATAAGAACGTGGGAGCAATGGGCACAGAG										
Mus musculus	RefSeq	ILMN_209476	ILMN_209476	HIBADH	NM_145567.1	NM_145567.1		58875	21704139	NM_145567.1	Hibadh	NP_663542.1	ILMN_1247221	000770593	S	1543	GCTTCCACACTCAGCCGGCTTGCTTCAGTATTTTTGCTTCCTGTATATTC	6	-	52496365-52496414	6qB3	Mus musculus 3-hydroxyisobutyrate dehydrogenase (Hibadh), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid [goid 6573] [evidence IEA]; The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: 3-hydroxy-2-methylpropanoate + NAD+ = 2-methyl-3-oxopropanoate + NADH + H+ [goid 8442] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+ [goid 4616] [evidence IEA]	AI265272; 6430402H10Rik	AI265272; 6430402H10Rik
Mus musculus	MEEBO	ILMN_224080	ILMN_224080	OLFR124	scl8512.1.1_125				22128830	NM_147062	Olfr124		ILMN_2774404	002120307	S	693	TGAGAGTCGCCGGAAGGCATTTAATACCTGTGCTTCACATCTGCTGGTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_229481	ILMN_229481	NHS	NM_001081052.1	NM_001081052.1		195727	124486677	NM_001081052.1	Nhs	NP_001074521.1	ILMN_3075461	003310053	I	2127	CTCGGACACCTTTGGAAGCCCCGTCCATTGCATTTCCACAGCTAGTGTCC	X	-	158280509-158280558	XqF4	Mus musculus Nance-Horan syndrome (human) (Nhs), mRNA.		The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]		Nhs1; Gm389; Xcat; Gm48	Nhs1; Gm389; Xcat; Gm48
Mus musculus	RefSeq	ILMN_200287	ILMN_200287	LOC386137	XM_359088.1	XM_359088.1			38081222	XM_359088.1	LOC386137		ILMN_1215431	004050546	S	328	GATTGCATATGGGATGGATCCCAGAGTCTTGCTCAATACCCGCAAGGGCC										
Mus musculus	RefSeq	ILMN_220757	ILMN_220757	NSMCE2	NM_026746.1	NM_026746.1		68501	21312037	NM_026746.1	Nsmce2	NP_081022.1	ILMN_2807474	000620242	S	935	ATGCCAGCGATAGGCCTGGCCAAGCAGCGCTGTTTGCGGTAACCCTTGAA	15	+	59431206-59431255	15qD1	Mus musculus non-SMC element 2 homolog (MMS21, S. cerevisiae) (Nsmce2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	AI661537; 1110014D18Rik	AI661537; 1110014D18Rik
Mus musculus	RefSeq	ILMN_228698	ILMN_228698	RHOX8	NM_001004193.2	NM_001004193.2		434768	91598892	NM_001004193.2	Rhox8	NP_001004193.1	ILMN_2784392	003400561	S	882	GGAACTGGAGCGCATTTTCGAACGCAATCACTATCCCAGTGCTGCGGCCC	X	-	35231027-35231076	XqA3.3	Mus musculus reproductive homeobox 8 (Rhox8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tox	Tox
Mus musculus	RefSeq	ILMN_221649	ILMN_230607	LOC630729	XM_904332.3	XM_904332.3		630729	149258654	XM_904332.3	LOC630729	XP_909425.3	ILMN_1214396	006860369	S	1855	GGCCTAGCTTGCTAGTTTTATATGATGGGAAGTCTGCAGAATATACGTGG					PREDICTED: Mus musculus similar to glutathione reductase 1 (LOC630729), mRNA.					
Mus musculus	RefSeq	ILMN_208694	ILMN_242537	TXNDC11	NM_134105.2	NM_134105.2		106200	142383937	NM_134105.2	Txndc11	NP_598866.1	ILMN_1230444	002030452	S	781	CAGCGGACCCTGGAGCAGCAGCACAGGCTACTCCGGCGCCACAGCCAGAA	16	-	11075393-11075442	16qA1	Mus musculus thioredoxin domain containing 11 (Txndc11), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		2810408E11Rik; Txdc11; EFP1; AI427833	2810408E11Rik; Txdc11; EFP1; AI427833
Mus musculus	Riken	ILMN_205562	ILMN_205562	9930113L08RIK	ri|9930113L08|PX00062F06|AK037096|3090					AK037096	9930113L08Rik		ILMN_2573519	000010497	S	2954	GCCACTGTGCTCTGTCCAGATTGAACAGGGCAGGGAAGTTAGCTAAATGC										
Mus musculus	MEEBO	ILMN_190662	ILMN_190662	ZFP639	scl23294.9_553				31981700	NM_144519	Zfp639		ILMN_2472192	001570670	S	18	GGGACTTACTCGGTCACCTTCAAGTCCATGAGACTACCTGACCGTGATCT										
Mus musculus	RefSeq	ILMN_217317	ILMN_217317	FBLN5	NM_011812.3	NM_011812.3		23876	118130029	NM_011812.3	Fbln5	NP_035942.1	ILMN_2681796	003180253	S	5734	GTACAACCAAAAACTCTCATGAGCATTCATGGGCATGCATTTGAAATTTA	12	-	102984823-102984872	12qE	Mus musculus fibulin 5 (Fbln5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DANCE; EVEC; A55	DANCE; EVEC; A55
Mus musculus	Riken	ILMN_206957	ILMN_206957	NPC1	ri|E030032A03|PX00206F23|AK087174|3404					AK087174	Npc1		ILMN_1255914	001990653	S	2039	CTTTGAACCCAAAGGCCACCAGTCAGCTATCATCTTCGTGGTAACCCGGG						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IEA]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence IMP]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IMP]	Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_184763	ILMN_184763	ZFP334	NM_178411.2	NM_178411.2		228876	31341520	NM_178411.2	Zfp334	NP_848498.1	ILMN_2855298	006060521	S	4711	TGGAGGCCGGCTGGGCTTCTCCCGTGTGGTCTTCCTACAGCTTGTGGCAA	2	-	165203208-165203257	2qH3	Mus musculus zinc finger protein 334 (Zfp334), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC27911; D2Ertd535e	MGC27911; D2Ertd535e
Mus musculus	RefSeq	ILMN_184763	ILMN_184763	ZFP334	NM_178411.2	NM_178411.2		228876	31341520	NM_178411.2	Zfp334	NP_848498.1	ILMN_2421371	004070661	S	233	TGGGAAGGAGAGAGGTGTGTGCGTGCAAAAAGCGGATCCCAGCAGTCCTG	2	-	165213477-165213526	2qH3	Mus musculus zinc finger protein 334 (Zfp334), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC27911; D2Ertd535e	MGC27911; D2Ertd535e
Mus musculus	RefSeq	ILMN_212631	ILMN_212631	MPP4	NM_145143.1	NM_145143.1		227157	21553098	NM_145143.1	Mpp4	NP_660125.1	ILMN_2932574	001470291	S	1860	CTCAGGAAGAACTGCAGTGGGTGCCAGAGGCATGGGTTTCCCCTGACACT	1	-	59065804-59065853	1qC1.3	Mus musculus membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) (Mpp4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DLG6	DLG6
Mus musculus	RefSeq	ILMN_212345	ILMN_212345	POMP	NM_025624.2	NM_025624.2		66537	142377568	NM_025624.2	Pomp	NP_079900.1	ILMN_2625352	002340731	S	500	GCAGGGAGGAACGACGAGTGTGCTCAGCATAGTTGCCTGCTACAGTCTGA	5	+	148687120-148687169	5qG3	Mus musculus proteasome maturation protein (Pomp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		2510048O06Rik	2510048O06Rik
Mus musculus	RefSeq	ILMN_222187	ILMN_222187	TAGLN3	NM_019754.3	NM_019754.3		56370	56118248	NM_019754.3	Tagln3	NP_062728.1	ILMN_2745930	004730474	S	845	CCCCTGGTAGAGAGGACGGATGTTCCGCACCACAGCCCGTGACAAAGAAA	16	-	45711611-45711660	16qB5	Mus musculus transgelin 3 (Tagln3), mRNA.		The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]		AI426007; 2700038H05Rik; 2900005O10Rik; Np25	AI426007; 2700038H05Rik; 2900005O10Rik; Np25
Mus musculus	RefSeq	ILMN_212149	ILMN_212149	OSMR	NM_011019.1	NM_011019.1		18414	6754955	NM_011019.1	Osmr	NP_035149.1	ILMN_2623280	005910220	S	4341	CCTTCCTCTTAATGCTTGTCACATTGCAGACCAAGGTGGAGAGGTTCTCC	15	-	6761206-6761255	15qA1	Mus musculus oncostatin M receptor (Osmr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with oncostatin-M to initiate a change in cell activity [goid 4924] [evidence IDA];  [goid 4896] [evidence IEA]	OSMRB	OSMRB
Mus musculus	Riken	ILMN_204647	ILMN_204647	4632419F02RIK	ri|4632419F02|PX00102E03|AK028526|2992					AK028526	4632419F02Rik		ILMN_2566582	004010192	S	2390	CGGAGACAATGTGTGGATCAGAGACTGAAGGAAAGGCCACCCAGAGACTA										
Mus musculus	RefSeq	ILMN_212370	ILMN_313347	MSL3L2	NR_003618.1	NR_003618.1		73390	153792383	NR_003618.1	Msl3l2		ILMN_2625654	001090491	S	9607	CAGGCTGCGTGTGACAGCAGGAAGCAGCCTCTCCTATGTTCAGAGGGAAT				10qB3	Mus musculus male-specific lethal 3-like 2 (Drosophila) (Msl3l2), non-coding RNA.					
Mus musculus	Riken	ILMN_204327	ILMN_204327	6030426J21RIK	ri|6030426J21|PX00056A14|AK031417|3732					AK031417	6030426J21Rik		ILMN_2564128	001300612	S	2850	GGACTCAGAGAGCCTTCCGTGTGTCCAGTTAGTTCTATGTTGGGCCAAGA										
Mus musculus	Riken	ILMN_204939	ILMN_204939	D230034L06RIK	ri|D230034L06|PX00189D01|AK084379|1705					AK084379	D230034L06Rik		ILMN_2568776	001430010	S	531	ATCCTTCGGGCACTGAGTGAGCACCAGGCACAAGCCGAGGCTGGAAGGTG										
Mus musculus	RefSeq	ILMN_220401	ILMN_252914	1700007K13RIK	NM_027040.1	NM_027040.1		69327	110625741	NM_027040.1	1700007K13Rik	NP_081316.1	ILMN_1232336	000110019	S	315	ACAGGACCAGTAACCAAACCTACGGAAGCAGAGCCCCCACGGTGCATGAG	2	-	28320662-28320711	2qA3	Mus musculus RIKEN cDNA 1700007K13 gene (1700007K13Rik), mRNA.				MGC118342; pierce 1; RP23-430H1.2	MGC118342; pierce 1; RP23-430H1.2
Mus musculus	RefSeq	ILMN_214137	ILMN_214137	NAP1L1	NM_015781.3	NM_015781.3		53605	142352831	NM_015781.3	Nap1l1	NP_056596.1	ILMN_1241857	001110273	S	2007	CCTAGCACCCTAGCTCTAGCTCTGTCAGATACGTTAATGCATACATCCTC	10	+	110933279-110933328	10qD1	Mus musculus nucleosome assembly protein 1-like 1 (Nap1l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	NAP-1; AA407126; AI256722; D10Ertd68e	NAP-1; AA407126; AI256722; D10Ertd68e
Mus musculus	RefSeq	ILMN_238881	ILMN_238881	LOC435337	NM_001013824.1	NM_001013824.1		435337	85701505	NM_001013824.1	LOC435337	NP_001013846.1	ILMN_3152717	001410403	A	495	AAAGAATAAAGGCAAAGGAGGCAAAAACAGGCGCAGAGGTAAAAATGAAA	12	-	88785187-88785236	12qD3	Mus musculus similar to Eukaryotic translation initiation factor 1A (eIF-1A) (eIF-4C) (LOC435337), mRNA.					
Mus musculus	RefSeq	ILMN_238881	ILMN_238881	LOC435337	NM_001013824.1	NM_001013824.1		435337	85701505	NM_001013824.1	LOC435337	NP_001013846.1	ILMN_3073818	006330689	I	1138	GGGTATAATTGAACTCAGGACACAGCAGTGTGCACTGTTAAGGGACTGCC	12	-	88784544-88784593	12qD3	Mus musculus similar to Eukaryotic translation initiation factor 1A (eIF-1A) (eIF-4C) (LOC435337), mRNA.					
Mus musculus	RefSeq	ILMN_209432	ILMN_209432	ARHGAP27	NM_133715.4	NM_133715.4		544817	146149107	NM_133715.4	Arhgap27	NP_598476.2	ILMN_1227758	005130438	S	3122	CCTGTGTCAACTGCCCGCTTCCTCCCTCGTGCACCTCAATCTATGGATCT				11qE1	Mus musculus Rho GTPase activating protein 27 (Arhgap27), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence ISO]	2310069I04Rik; MGC62780	2310069I04Rik; MGC62780
Mus musculus	Riken	ILMN_206648	ILMN_206648	CYP11A	ri|6030456M03|PX00314P15|AK077945|3443					AK077945	Cyp11a		ILMN_2581647	007200372	S	3104	TCAGACCATGAGGCACACATCTTTAATCCAAGTACTCAGGAGGCAGAGGC										
Mus musculus	RefSeq	ILMN_198647	ILMN_226656	EG215208	XM_001002565.2	XM_001002565.2		215208	149257078	XM_001002565.2	EG215208	XP_001002565.2	ILMN_1253497	000450037	S	1434	CCGGTCCCTTCAAAGACATGGAAAAACTCACGCTGAAGAAAAAGCCCAGG				7qB3	PREDICTED: Mus musculus predicted gene, EG215208 (EG215208), mRNA.					
Mus musculus	MEEBO	ILMN_192186	ILMN_192186	SCL0001371.1_19	scl0001371.1_19	BC024092.1			23271648	BC024092.1	scl0001371.1_19		ILMN_2485774	006290504	S	20	GATGCTGTCCCACAGGCAAGATGACAACAACAGGCATGCAACCAGGCACC										
Mus musculus	RefSeq	ILMN_215656	ILMN_215656	RAB35	NM_198163.1	NM_198163.1		77407	37718982	NM_198163.1	Rab35	NP_937806.1	ILMN_2662097	003850239	S	2033	GTTTTAGATTTTCTTTCCTAGGCGATTTCCAGGCACAGTCCTGACTGGAC	5	+	116097037-116097086	5qF	Mus musculus RAB35, member RAS oncogene family (Rab35), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	9530019H02Rik; RAY; RAB1C; AU040256; H-ray	9530019H02Rik; RAY; RAB1C; AU040256; H-ray
Mus musculus	RefSeq	ILMN_213205	ILMN_213205	BBS9	NM_181316.3	NM_181316.3		319845	37620184	NM_181316.3	Bbs9	NP_851833.2	ILMN_2684272	006270088	S	1817	GCGTTTTCTGTGTACCTGAAGAGAAACTACACACCATCCGAGTTAGAAGG	9	+	22450443-22450492	9qA3	Mus musculus Bardet-Biedl syndrome 9 (Bbs9), mRNA.		The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]		E130103I17Rik	E130103I17Rik
Mus musculus	RefSeq	ILMN_213205	ILMN_213205	BBS9	NM_181316.3	NM_181316.3		319845	37620184	NM_181316.3	Bbs9	NP_851833.2	ILMN_2634728	000160291	S	3235	CATGCGCTTATAGTCAGGATTTAGCAAGGTGACGAAGTTTGGGGACAGAC	9	+	22692577-22692626	9qA3	Mus musculus Bardet-Biedl syndrome 9 (Bbs9), mRNA.		The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]		E130103I17Rik	E130103I17Rik
Mus musculus	RefSeq	ILMN_215679	ILMN_215679	LYPLA2	NM_011942.1	NM_011942.1		26394	7242155	NM_011942.1	Lypla2	NP_036072.1	ILMN_1228132	000050224	S	1509	TTGTCTTCTGTCTTCATGTGGTTTTGGGTGTTTTTCTCGTTTTGTCCTGG	4	-	135524174-135524223	4qD3	Mus musculus lysophospholipase 2 (Lypla2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	LysoII	LysoII
Mus musculus	RefSeq	ILMN_196119	ILMN_196119	V1RH8	NM_134217.1	NM_134217.1		171251	21717750	NM_134217.1	V1rh8	NP_598978.1	ILMN_2906929	001190152	S	642	TCTCCACAAGCATCACCAGCATGTCCTCTATCTTCTCAACTCCAATCTCC	13	-	22684108-22684157	13qA3.1	Mus musculus vomeronasal 1 receptor, H8 (V1rh8), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	Riken	ILMN_206298	ILMN_206298	C130083B15RIK	ri|C130083B15|PX00172J13|AK081861|2600					AK081861	C130083B15Rik		ILMN_1245981	002710626	S	2157	CGGCAGGGACTCTGGGGCAGGAAAACCTGGAAATTGTGTAGATGATGTGG										
Mus musculus	RefSeq	ILMN_200550	ILMN_256615	LOC670485	XM_981544.1	XM_981544.1		670485	94406855	XM_981544.1	LOC670485	XP_986638.1	ILMN_2539151	005550487	S	149	GACCTGACGTCAGGAATAGATGGGAGCTTCGGAGGTTGAGCGTCTCCCTG					PREDICTED: Mus musculus similar to Histone H1.5 (H1 VAR.5) (H1b) (LOC670485), mRNA.					
Mus musculus	RefSeq	ILMN_211124	ILMN_211124	CTSO	NM_177662.2	NM_177662.2		229445	118130454	NM_177662.2	Ctso	NP_808330.1	ILMN_2623040	002570068	S	2144	ACTTTCATTATGTTATCAGCAATGTTTCTAATACCCAGTTTCAAATGCAG	3	+	81759338-81759387	3qE3	Mus musculus cathepsin O (Ctso), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	A430056C07; AI118514; A330105D01Rik	A430056C07; AI118514; A330105D01Rik
Mus musculus	RefSeq	ILMN_211124	ILMN_211124	CTSO	NM_177662.2	NM_177662.2		229445	118130454	NM_177662.2	Ctso	NP_808330.1	ILMN_2612754	001190719	S	3249	CCCCAGAAAACCAGAGACAGAGCAGCCGAATGTGTTCCTTACTACACAGC	3	+	81760443-81760492	3qE3	Mus musculus cathepsin O (Ctso), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	A430056C07; AI118514; A330105D01Rik	A430056C07; AI118514; A330105D01Rik
Mus musculus	RefSeq	ILMN_204492	ILMN_226556	WAPAL	NM_001004436.3	NM_001004436.3		218914	145301595	NM_001004436.3	Wapal	NP_001004436.2	ILMN_1242714	004280164	S	406	AGGCCAAAGCACCCGCCAGGCGCCGAGGGGAATATGAAACAGGTGTCAAA				14qB	Mus musculus wings apart-like homolog (Drosophila) (Wapal), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IDA]		2410073G16; BC037674; mKIAA0261; mWAPL; KIAA0261; FOE; A530089A20Rik	2410073G16; BC037674; mKIAA0261; mWAPL; KIAA0261; FOE; A530089A20Rik
Mus musculus	RefSeq	ILMN_188752	ILMN_226556	WAPAL	NM_001004436.3	NM_001004436.3		218914	145301595	NM_001004436.3	Wapal	NP_001004436.2	ILMN_2455406	000940167	S	3500	GCAAACATCCTGTTCCTTTGATTCCTCCTTCTCTAGTGGAGAAGGCGATC				14qB	Mus musculus wings apart-like homolog (Drosophila) (Wapal), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IDA]		2410073G16; BC037674; mKIAA0261; mWAPL; KIAA0261; FOE; A530089A20Rik	2410073G16; BC037674; mKIAA0261; mWAPL; KIAA0261; FOE; A530089A20Rik
Mus musculus	RefSeq	ILMN_222039	ILMN_226556	WAPAL	NM_001004436.3	NM_001004436.3		218914	145301595	NM_001004436.3	Wapal	NP_001004436.2	ILMN_2743756	006380475	S	4189	TGATCACCCGATTTCTTCATCATGCATTCTGCGTTTGCTAAATGACAGTT				14qB	Mus musculus wings apart-like homolog (Drosophila) (Wapal), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IDA]		2410073G16; BC037674; mKIAA0261; mWAPL; KIAA0261; FOE; A530089A20Rik	2410073G16; BC037674; mKIAA0261; mWAPL; KIAA0261; FOE; A530089A20Rik
Mus musculus	RefSeq	ILMN_246878	ILMN_246878	CPSF6	NM_001013391.1	NM_001013391.1		432508	62909982	NM_001013391.1	Cpsf6	NP_001013409.1	ILMN_3042324	002480280	I	53	TGGCGGACGGTGTGGACCACATAGACATTTACGCGGATGTGGGTGAAGAG	10	-	116813903-116813952	10qD2	Mus musculus cleavage and polyadenylation specific factor 6 (Cpsf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI256641; HPBRII-7; 4733401N12Rik; CFIM; HPBRII-4; CFIM68	AI256641; HPBRII-7; 4733401N12Rik; CFIM; HPBRII-4; CFIM68
Mus musculus	RefSeq	ILMN_246878	ILMN_246878	CPSF6	NM_001013391.1	NM_001013391.1		432508	62909982	NM_001013391.1	Cpsf6	NP_001013409.1	ILMN_3117180	006450300	A	2660	GCTGATGGTGCCATAGGCAGTGTAATTATGGCTATACAGCAAGATGCGTA	10	-	116785524-116785573	10qD2	Mus musculus cleavage and polyadenylation specific factor 6 (Cpsf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI256641; HPBRII-7; 4733401N12Rik; CFIM; HPBRII-4; CFIM68	AI256641; HPBRII-7; 4733401N12Rik; CFIM; HPBRII-4; CFIM68
Mus musculus	RefSeq	ILMN_216343	ILMN_216343	1700025G04RIK	NM_197990.2	NM_197990.2		69399	118130775	NM_197990.2	1700025G04Rik	NP_932107.1	ILMN_2669982	002850112	S	1353	TGTAGCATTGGCTTTTGCTCAGATGCAAATGGAAGTGTGACCACGTGACC	1	-	153739784-153739833	1qG2	Mus musculus RIKEN cDNA 1700025G04 gene (1700025G04Rik), mRNA.				2900042O04Rik; AV212693	2900042O04Rik; AV212693
Mus musculus	RefSeq	ILMN_212928	ILMN_212928	1810009J06RIK	NM_023707.3	NM_023707.3		73626	118130492	NM_023707.3	1810009J06Rik	NP_076196.1	ILMN_2631712	004200725	S	707	CACCAAAGTCTGCAACTACCTAAGCTGGATTCAGGAGACCATGGCGAACA	6	+	40916618-40916667	6qB1	Mus musculus RIKEN cDNA 1810009J06 gene (1810009J06Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210056	ILMN_210056	IIGP1	NM_021792.3	NM_021792.3		60440	49274636	NM_021792.3	Iigp1	NP_068564.3	ILMN_1229996	005570703	S	2733	AAATTTCTCTGCTTTATAATGATTAGTGTTTTGAATGCTATGACAATAAA	18	+	60552181-60552230	18qD3	Mus musculus interferon inducible GTPase 1 (Iigp1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISS]; Interacting selectively with GDP, guanosine 5'-diphosphate [goid 19003] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Iigp; AW111922; 2900074L10Rik; AI046432	Iigp; AW111922; 2900074L10Rik; AI046432
Mus musculus	Riken	ILMN_202388	ILMN_202388	4930554K12RIK	ri|4930554K12|PX00035A17|AK016121|1157					AK016121	4930554K12Rik		ILMN_2549226	007570180	S	809	GCTTTTGTGACGCCCTGGCGGGCTGGCTGGGCAGATTTGAAAGTTGTGGT										
Mus musculus	RefSeq	ILMN_223103	ILMN_223103	EPHX2	NM_007940.3	NM_007940.3		13850	118131083	NM_007940.3	Ephx2	NP_031966.2	ILMN_1226688	003520491	S	1910	CCCACCCCAGTAGGAAGGTATGGGGCAGTCCAGTTTATAACTTTGCAACC	14	-	66703289-66703338	14qD1	Mus musculus epoxide hydrolase 2, cytoplasmic (Ephx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring [goid 19439] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: an epoxide + H2O = a glycol [goid 4301] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AW106936; Eph2	AW106936; Eph2
Mus musculus	RefSeq	ILMN_255417	ILMN_255417	CITED4	NM_019563.2	NM_019563.2		56222	113866003	NM_019563.2	Cited4	NP_062509.1	ILMN_2998934	005490743	S	961	CCCAAGCCTCAGCGGTCTAATGGAGGGAACTGAACCAGCCTTCGGATTCC	4	+	120340128-120340177	4qD2.2	Mus musculus Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 (Cited4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IPI]	Mrg2; AW742964; AU019445	Mrg2; AW742964; AU019445
Mus musculus	Riken	ILMN_203347	ILMN_203347	B330007M19RIK	ri|B330007M19|PX00070G17|AK046525|2935					AK046525	B330007M19Rik		ILMN_1220778	006770162	S	2784	CTACACATGGGCAGCTCTGACACTGAACTCTCCTTAAGCCAGGCATTGTG										
Mus musculus	RefSeq	ILMN_216399	ILMN_214228	CYFIP2	NM_133769.2	NM_133769.2		76884	84370255	NM_133769.2	Cyfip2	NP_598530.2	ILMN_2670713	007550059	S	6290	GGGGTACCTGTGTTGAGTCGATAAAACATTTTCATCTCCATTAAAACTGC	11	-	46007371-46007420	11qB1.1	Mus musculus cytoplasmic FMR1 interacting protein 2 (Cyfip2), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1168; Pir121; 1500004I01Rik; AU022376; AA930218; 6430511D02Rik	mKIAA1168; Pir121; 1500004I01Rik; AU022376; AA930218; 6430511D02Rik
Mus musculus	RefSeq	ILMN_214228	ILMN_214228	CYFIP2	NM_133769.2	NM_133769.2		76884	84370255	NM_133769.2	Cyfip2	NP_598530.2	ILMN_1232800	007330333	S	3790	CAATGAGGTTTTTGCCATCCTGAACAAGTACATGAAGTCTGTAGAGACAG	11	-	46009871-46009920	11qB1.1	Mus musculus cytoplasmic FMR1 interacting protein 2 (Cyfip2), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1168; Pir121; 1500004I01Rik; AU022376; AA930218; 6430511D02Rik	mKIAA1168; Pir121; 1500004I01Rik; AU022376; AA930218; 6430511D02Rik
Mus musculus	MEEBO	ILMN_214930	ILMN_214930	DPH2L1	scl00116905.1_79				21536257	NM_144491	Dph2l1		ILMN_2653575	004010541	S	1789	GCTGCATCTCAGCGTCAGGCCTACCTTAAGTTCTTGGACCAGTTTGCAGA										
Mus musculus	MEEBO	ILMN_209820	ILMN_209820	CYHR1	scl0002450.1_329	NM_019396.1			9506490	NM_019396.1	Cyhr1		ILMN_2599521	002690491	S	1110	CAAGCTGCTGGCCGCCAAGAACATTAACCTGCGGCTCTTCCTGTTCCAGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_209820	ILMN_209820	CYHR1	scl0002450.1_329	NM_019396.1			9506490	NM_019396.1	Cyhr1		ILMN_2772720	003830639	S	195	TCATTTCCTATCTCCTCAAACTCACTACTATTCAACGTGTCATGGATTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_209820	ILMN_209820	CYHR1	scl0002450.1_329	NM_019396.1			9506490	NM_019396.1	Cyhr1		ILMN_2599527	005870441	S	1115	TGCTGGCCGCCAAGAACATTAACCTGCGGCTCTTCCTGTTCCAGATACAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_189027	ILMN_236436	ADRB1	NM_007419.1	NM_007419.1		11554	6680665	NM_007419.1	Adrb1	NP_031445.1	ILMN_2710611	005900471	S	1309	ACCGGCTGCAACGGCGGGACAACCACTGTGGACAGCGATTCGAGCCTGGA	19	+	56798170-56798219	19qD2	Mus musculus adrenergic receptor, beta 1 (Adrb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]	Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria [goid 50873] [evidence IGI]; Any homeostatic process by which an organism produces heat, thereby raising its internal temperature [goid 31649] [evidence IGI]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IDA]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IMP]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IMP]; The process that results in increased metabolic rate in tissues of an organism. It is triggered by the detection of dietary excess. This process is achieved via signalling in the sympathetic nervous system [goid 2024] [evidence IGI]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IMP]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IGI]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IMP]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4940] [evidence IMP];  [goid 4940] [evidence IDA]	beta-AR; Adrb-1	beta-AR; Adrb-1
Mus musculus	RefSeq	ILMN_208753	ILMN_208753	EEF2	NM_007907.1	NM_007907.1		13629	33859481	NM_007907.1	Eef2	NP_031933.1	ILMN_1252294	002350484	S	1106	CTGGCTGCCTGCAGGGGACGCCCTCCTGCAGATGATCACCATCCACTTAC	10	+	80642430-80642479	10qC1	Mus musculus eukaryotic translation elongation factor 2 (Eef2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	MGC98463; Ef-2	MGC98463; Ef-2
Mus musculus	RefSeq	ILMN_208753	ILMN_208753	EEF2	NM_007907.1	NM_007907.1		13629	33859481	NM_007907.1	Eef2	NP_031933.1	ILMN_1239110	001690070	S	930	AAACTTCCCCGCACCTTCTGCCAGCTCATCCTGGACCCCATCTTCAAGGT	10	+	80642162-80642196:80642289-80642303	10qC1	Mus musculus eukaryotic translation elongation factor 2 (Eef2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	MGC98463; Ef-2	MGC98463; Ef-2
Mus musculus	RefSeq	ILMN_208753	ILMN_208753	EEF2	NM_007907.1	NM_007907.1		13629	33859481	NM_007907.1	Eef2	NP_031933.1	ILMN_2589181	004560424	S	918	CAGATGGGAAAAAACTTCCCCGCACCTTCTGCCAGCTCATCCTGGACCCC	10	+	80642150-80642196:80642289-80642291	10qC1	Mus musculus eukaryotic translation elongation factor 2 (Eef2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	MGC98463; Ef-2	MGC98463; Ef-2
Mus musculus	Riken	ILMN_205456	ILMN_205456	9930115F03RIK	ri|9930115F03|PX00062O06|AK037105|2664					AK037105	9930115F03Rik		ILMN_1216406	002630451	S	2591	TTGGCTCACAGTTTGAGGCTGCAAAATCAAGGGTACTTGCAATGGAATGG										
Mus musculus	RefSeq	ILMN_209004	ILMN_209004	RBM10	NM_145627.1	NM_145627.1		236732	21704123	NM_145627.1	Rbm10	NP_663602.1	ILMN_2821254	002370433	S	2737	CGCAAGAAACAGGGCATTGTGACACCCATTGAGGCCCAAACACGAGTTCG	X	+	20227570-20227602:20227685-20227701	XqA1.3	Mus musculus RNA binding motif protein 10 (Rbm10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E430039K10Rik; mKIAA0122; MGC7826	E430039K10Rik; mKIAA0122; MGC7826
Mus musculus	RefSeq	ILMN_209004	ILMN_209004	RBM10	NM_145627.1	NM_145627.1		236732	21704123	NM_145627.1	Rbm10	NP_663602.1	ILMN_2591627	004230066	S	610	GCCGGGGCTTCGCCTTCGTCGAGTTTAGTCACTTGCAGGACGCTACACGA	X	+	20218314-20218363	XqA1.3	Mus musculus RNA binding motif protein 10 (Rbm10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E430039K10Rik; mKIAA0122; MGC7826	E430039K10Rik; mKIAA0122; MGC7826
Mus musculus	RefSeq	ILMN_209004	ILMN_209004	RBM10	NM_145627.1	NM_145627.1		236732	21704123	NM_145627.1	Rbm10	NP_663602.1	ILMN_1242598	006760576	S	359	ACAGGCACAGTCCCACTGGCCCGCCAGGCTTCCCCAGAGACGGCGACTAT	X	+	20214607-20214656	XqA1.3	Mus musculus RNA binding motif protein 10 (Rbm10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E430039K10Rik; mKIAA0122; MGC7826	E430039K10Rik; mKIAA0122; MGC7826
Mus musculus	RefSeq	ILMN_209004	ILMN_209004	RBM10	NM_145627.1	NM_145627.1		236732	21704123	NM_145627.1	Rbm10	NP_663602.1	ILMN_2591626	001980554	S	609	AGCCGGGGCTTCGCCTTCGTCGAGTTTAGTCACTTGCAGGACGCTACACG	X	+	20218313-20218362	XqA1.3	Mus musculus RNA binding motif protein 10 (Rbm10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E430039K10Rik; mKIAA0122; MGC7826	E430039K10Rik; mKIAA0122; MGC7826
Mus musculus	MEEBO	ILMN_193464	ILMN_193464	6330407A03RIK	scl25715.1.1_94						6330407A03Rik		ILMN_1259168	000110670	S	20	AGTGTCTTATTTGTTAAGCTTTGAGAATCTTGGGCCAGGTTCATGTGGAG										
Mus musculus	RefSeq	ILMN_219735	ILMN_219735	4930503E14RIK	NM_029131.2	NM_029131.2		74954	142371426	NM_029131.2	4930503E14Rik	NP_083407.1	ILMN_2712936	000150450	S	1183	GTACATATTGACTGCCCACTTTTAGTTACTATTGAATAAATTGGATGTAT	14	-	44740888-44740937	14qC1	Mus musculus RIKEN cDNA 4930503E14 gene (4930503E14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_238659	ILMN_238659	XYLT1	NM_175645.3	NM_175645.3		233781	120407063	NM_175645.3	Xylt1	NP_783576.2	ILMN_2870152	007510524	S	277	TGCTGCAGACGCTGGTGGTGTGGAATTTCAGCAGCCTGGACTCCGGGGCT	7	+	124524769-124524818	7qF2	Mus musculus xylosyltransferase 1 (Xylt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IEA]; Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate [goid 30158] [evidence IEA]	8030490L12	8030490L12
Mus musculus	RefSeq	ILMN_194537	ILMN_238659	XYLT1	NM_175645.3	NM_175645.3		233781	120407063	NM_175645.3	Xylt1	NP_783576.2	ILMN_2507331	003180102	S	2332	CATGGATGATGCCAAAGAAAGTCTTCAAGGTCGCAAGTCCCCCCAGTGAC	7	+	124794250-124794299	7qF2	Mus musculus xylosyltransferase 1 (Xylt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IEA]; Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate [goid 30158] [evidence IEA]	8030490L12	8030490L12
Mus musculus	Riken	ILMN_204736	ILMN_204736	B930032P17RIK	ri|B930032P17|PX00163P09|AK047187|1965					AK047187	B930032P17Rik		ILMN_2567234	001070136	S	1599	CCGGGCCCTATCTCCCATCGCTTGGCTTATTGCAGTGGCCGGTTGCGATA										
Mus musculus	RefSeq	ILMN_221108	ILMN_221108	LGALS8	NM_018886.2	NM_018886.2		56048	31543121	NM_018886.2	Lgals8	NP_061374.1	ILMN_2828677	006620685	S	2379	CTTCATAAAGAATGCACTACTGAGATATTGGGGGCTCAAAGGCACTCAGG	13	-	12493980-12494029	13qA1	Mus musculus lectin, galactose binding, soluble 8 (Lgals8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Lgals-8; D13Ertd524e; 1200015E08Rik; AI326142	Lgals-8; D13Ertd524e; 1200015E08Rik; AI326142
Mus musculus	Riken	ILMN_206262	ILMN_206262	D030041G07RIK	ri|D030041G07|PX00180A08|AK083529|3073					AK083529	D030041G07Rik		ILMN_1242969	006400059	S	2788	CCCTCTGGGTAACTGGGGAGATGTTTGGGTGAGAGAGACAGAATTGTCCG										
Mus musculus	RefSeq	ILMN_245784	ILMN_245784	VPS11	NM_027889.1	NM_027889.1		71732	58037258	NM_027889.1	Vps11	NP_082165.1	ILMN_3161554	003130717	S	2915	CGTAGGCCTGAGGAAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCC	9	-	44156403-44156452	9qA5.2	Mus musculus vacuolar protein sorting 11 (yeast) (Vps11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1200011A11Rik	1200011A11Rik
Mus musculus	RefSeq	ILMN_213014	ILMN_236520	DGCR2	NM_010048.2	NM_010048.2		13356	83816900	NM_010048.2	Dgcr2	NP_034178.2	ILMN_1237230	000610113	S	3646	GGGGGCTGTTTAGACTATTGCTATTCCAGTTCCAAGCACTGGAGTCTGCC	16	-	17842610-17842659	16qA3	Mus musculus DiGeorge syndrome critical region gene 2 (Dgcr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Sez12; Dgsc; Idd; mKIAA0163; Lan; 9930034O06Rik; DGS-C	Sez12; Dgsc; Idd; mKIAA0163; Lan; 9930034O06Rik; DGS-C
Mus musculus	RefSeq	ILMN_214700	ILMN_236520	DGCR2	NM_010048.2	NM_010048.2		13356	83816900	NM_010048.2	Dgcr2	NP_034178.2	ILMN_2650914	006940066	S	2717	CATACATGCCTCCCAGTCCCTCCACAGCAACCGGGTACCTGGGGATTTTT	16	-	17844257-17844301:17845058-17845062	16qA3	Mus musculus DiGeorge syndrome critical region gene 2 (Dgcr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Sez12; Dgsc; Idd; mKIAA0163; Lan; 9930034O06Rik; DGS-C	Sez12; Dgsc; Idd; mKIAA0163; Lan; 9930034O06Rik; DGS-C
Mus musculus	Riken	ILMN_207223	ILMN_207223	GLRA4	ri|D730029F11|PX00673J12|AK085727|1551					AK085727	Glra4		ILMN_2585974	001190181	S	526	GAGGATGTCAAATCTGGACTCAAAGGATCCCAGCCTATGTCCCCCTCTGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220862	ILMN_220862	C330046G03RIK	NM_145855.1	NM_145855.1		252974	22003907	NM_145855.1	C330046G03Rik	NP_665854.1	ILMN_2727872	001990630	S	1619	GAACATCACCGCTCAGACCTTTGTCAAGTTCCAGGACATCCCCACCTGCA	10	+	77343944-77343993	10qC1	Mus musculus RIKEN cDNA C330046G03 gene (C330046G03Rik), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Tnep1; ORF65	Tnep1; ORF65
Mus musculus	MEEBO	ILMN_189216	ILMN_189216	WFIKKN2	scl0278507.1_83				32451493	NM_181819	Wfikkn2		ILMN_2459353	001070446	S	20	AGGCCGTGCCCTGGTGACCGTGGATGAGGTCTTAAAAGATGAGAAGATGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]	Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199638	ILMN_199638	LOC382817	XM_356693.1	XM_356693.1			38075412	XM_356693.1	LOC382817		ILMN_1251110	005490152	S	303	GGTGTCTCGGGCAAAGCTCTCACAGTATTTTGATGATGACTCCCACAAGC										
Mus musculus	MEEBO	ILMN_195074	ILMN_195074	MJ-125-6_53	MJ-125-6_53						MJ-125-6_53		ILMN_2512355	006270224	S	11	TGTGGGCTTATTGATGGAATATCAACAACTATTGGTTCAGCTCTTCCAGT										
Mus musculus	MEEBO	ILMN_189427	ILMN_189427	USP47	scl074996.5_121				48928013	NM_133758	Usp47		ILMN_2461154	003060435	S	18	TTTGGGAACCATCTGCCCATCTATGGAATAAAGTTTCTCGGGGGCCTTGG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189427	ILMN_189427	USP47	scl074996.5_121				48928013	NM_133758	Usp47		ILMN_1251164	003360523	S	20	TGGGAACCATCTGCCCATCTATGGAATAAAGTTTCTCGGGGGCCTTGGCG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220094	ILMN_220094	RPS2	NM_008503.4	NM_008503.4		16898	145966764	NM_008503.4	Rps2	NP_032529.2	ILMN_2717549	006060390	S	773	GCTACCTGACTCCCGACCTCTGGAAAGAGACTGTCTTCACCAAGTCTCCT				17qA3.3	Mus musculus ribosomal protein S2 (Rps2), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC118038; Llrep3; MGC118037	MGC118038; Llrep3; MGC118037
Mus musculus	RefSeq	ILMN_201150	ILMN_315045	LOC100047752	XM_001478825.1	XM_001478825.1		100047752	149259317	XM_001478825.1	LOC100047752	XP_001478875.1	ILMN_1256604	004540019	S	324	CCAGGCTAAAGCACAGGGTTCAGTGTTAGGTGTGGCATCTGCGTCTTGAG					PREDICTED: Mus musculus hypothetical protein LOC100047752 (LOC100047752), mRNA.					
Mus musculus	RefSeq	ILMN_199139	ILMN_214541	MYH8	NM_177369.3	NM_177369.3		17885	71143151	NM_177369.3	Myh8	NP_796343.2	ILMN_1223735	002900131	S	6071	GCTGGGTCACTTGCCTCTCTGGGTTTACTTTTCTCCTACTGCTGACTAAA	11	+	67122058-67122107	11qB3	Mus musculus myosin, heavy polypeptide 8, skeletal muscle, perinatal (Myh8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA4211; 4832426G23Rik; MyHC-pn; mKIAA4211; Myhsp; AI327267; Myhs-p	KIAA4211; 4832426G23Rik; MyHC-pn; mKIAA4211; Myhsp; AI327267; Myhs-p
Mus musculus	RefSeq	ILMN_214541	ILMN_214541	MYH8	NM_177369.3	NM_177369.3		17885	71143151	NM_177369.3	Myh8	NP_796343.2	ILMN_2978040	004590601	S	5773	TGTGCTCCGGCTGCAGGACCTGGTGGACAAATTACAGGCGAAGGTGAAAT	11	+	67120399-67120448	11qB3	Mus musculus myosin, heavy polypeptide 8, skeletal muscle, perinatal (Myh8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA4211; 4832426G23Rik; MyHC-pn; mKIAA4211; Myhsp; AI327267; Myhs-p	KIAA4211; 4832426G23Rik; MyHC-pn; mKIAA4211; Myhsp; AI327267; Myhs-p
Mus musculus	RefSeq	ILMN_214541	ILMN_214541	MYH8	NM_177369.3	NM_177369.3		17885	71143151	NM_177369.3	Myh8	NP_796343.2	ILMN_2978038	006650435	S	6000	CACATCTTGCAGAGGAAGGAGGCTGCCAAGGGGCTGAAGGAAAGCACAGG	11	+	67121987-67122036	11qB3	Mus musculus myosin, heavy polypeptide 8, skeletal muscle, perinatal (Myh8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA4211; 4832426G23Rik; MyHC-pn; mKIAA4211; Myhsp; AI327267; Myhs-p	KIAA4211; 4832426G23Rik; MyHC-pn; mKIAA4211; Myhsp; AI327267; Myhs-p
Mus musculus	MEEBO	ILMN_211390	ILMN_211390	9830160G03RIK	scl00244091.2_50	NM_172904.1			27370383	NM_172904.1	9830160G03Rik		ILMN_2697294	000830112	S	3890	AAAGGTGATACCTGATTGGAAACCTCATGGTGTTGGAGATACCAGACACA										
Mus musculus	RefSeq	ILMN_221312	ILMN_221312	AGBL1	NM_172902.2	NM_172902.2		244071	120407040	NM_172902.2	Agbl1	NP_766490.2	ILMN_2782652	004290402	S	2385	CTGCCCGAGTGGTGGTGTGGAGAGAGATGGGGGTTTCCAGAAGCTATACC	7	+	83911262-83911311	7qD2	Mus musculus ATP/GTP binding protein-like 1 (Agbl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	EG244071; D430020F16; Nna1-l1	EG244071; D430020F16; Nna1-l1
Mus musculus	RefSeq	ILMN_222576	ILMN_222576	NUT	NM_172521.1	NM_172521.1		213765	27369727	NM_172521.1	Nut	NP_766109.1	ILMN_2751769	003180091	S	3464	AAGGAAGAAACGACGTCGTAGCCAGTAGGAAGCAGAGGGCCACCCTGCTC	2	-	112088322-112088344:112088345-112088371	2qE3	Mus musculus nuclear protein in testis (Nut), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			4932438M10; RP23-336F11.32	4932438M10; RP23-336F11.32
Mus musculus	RefSeq	ILMN_186727	ILMN_186727	TRPM2	NM_138301.1	NM_138301.1		28240	31083375	NM_138301.1	Trpm2	NP_612174.1	ILMN_2437986	003190709	S	5919	CTTTTGACAAGCAACAAAGGGGTCTCTGGGAATGGAGAGGTAGCCCAGTG	10	-	77392037-77392086	10qC1	Mus musculus transient receptor potential cation channel, subfamily M, member 2 (Trpm2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of manganese (Mn) ions into, out of, within or between cells [goid 6828] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroperoxide stimulus. Hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH [goid 33194] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transfer of manganese (Mn) ions from one side of a membrane to the other [goid 5384] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: ADP-ribose + H2O = AMP + D-ribose 5-phosphate [goid 47631] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	LTRPC2; 9830168K16Rik; Trrp7; C79133; Trp7; TRPC7	LTRPC2; 9830168K16Rik; Trrp7; C79133; Trp7; TRPC7
Mus musculus	RefSeq	ILMN_198463	ILMN_259642	GM462	XM_001003498.2	XM_001003498.2		243645	149255867	XM_001003498.2	Gm462	XP_001003498.2	ILMN_1241614	000770368	S	1836	TATGTATGACCTCACAGCCAAGCAGTCCTTCCTGTCGATCCGCCAGTGGC					PREDICTED: Mus musculus gene model 462, (NCBI) (Gm462), mRNA.					
Mus musculus	RefSeq	ILMN_224065	ILMN_231624	HOXB4	NM_010459.6	NM_010459.6		15412	145966844	NM_010459.6	Hoxb4	NP_034589.3	ILMN_1241077	006960564	S	961	GAAAGGACAATAAGGGAGCCGGGTAAAGTCCTTCGGAGACAAGATTCGAG				11qD	Mus musculus homeo box B4 (Hoxb4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence IDA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The process whose specific outcome is the progression of the bone marrow over time, from its formation to the mature structure [goid 48539] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-2.6	Hox-2.6
Mus musculus	RefSeq	ILMN_219932	ILMN_219932	OLFR830	NM_146566.1	NM_146566.1		258559	22129510	NM_146566.1	Olfr830	NP_666777.1	ILMN_2715382	006860189	S	868	CCCTTTGTCTATTGTTTGAGGAACAGGGATATGAAGGAGGCCCTGAAGAA	9	+	18680640-18680689	9qA2	Mus musculus olfactory receptor 830 (Olfr830), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR152-1	MOR152-1
Mus musculus	RefSeq	ILMN_208855	ILMN_208855	PARVB	NM_133167.3	NM_133167.3		170736	84781769	NM_133167.3	Parvb	NP_573395.1	ILMN_1245061	005490075	S	576	ATTCTGCATCTCCTCGTCTCCCTGGCCATGCACTTCAGGGCCCCCATTCA	15	+	84123238-84123287	15qE2	Mus musculus parvin, beta (Parvb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D15Gsk1; AI595373; AW742462	D15Gsk1; AI595373; AW742462
Mus musculus	RefSeq	ILMN_228163	ILMN_228163	CDH3	NM_001037809.1	NM_001037809.1		12560	83715977	NM_001037809.1	Cdh3	NP_001032898.1	ILMN_3077284	004730204	I	3554	CTCATGGGTGATGGAGCTGTAATCCTAGCACACCACAGAGGCAGGAGAGC	8	+	109445618-109445667	8qD3	Mus musculus cadherin 3 (Cdh3), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	P-cadherin; AI385538; Cadp; Pcad	P-cadherin; AI385538; Cadp; Pcad
Mus musculus	RefSeq	ILMN_228163	ILMN_228163	CDH3	NM_001037809.1	NM_001037809.1		12560	83715977	NM_001037809.1	Cdh3	NP_001032898.1	ILMN_3156246	004200093	A	2977	GCCTACAGGGCACTGGCCCTGGTACATTTCTCTGACATTTCTTGAGGCCT	8	+	109445041-109445090	8qD3	Mus musculus cadherin 3 (Cdh3), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	P-cadherin; AI385538; Cadp; Pcad	P-cadherin; AI385538; Cadp; Pcad
Mus musculus	RefSeq	ILMN_210273	ILMN_210273	STIP1	NM_016737.1	NM_016737.1		20867	14389430	NM_016737.1	Stip1	NP_058017.1	ILMN_2603953	001500706	S	1657	GATGGATGTGGGTCTCATCGCAATTCGGTGATAACTTGCTTTTCCCCCTC	19	-	7095569-7095588:7095589-7095618	19qA	Mus musculus stress-induced phosphoprotein 1 (Stip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Hop; STI1; p60; mSTI1	Hop; STI1; p60; mSTI1
Mus musculus	RefSeq	ILMN_223100	ILMN_310265	2310010M20RIK	XM_001479637.1	XM_001479637.1		69576	149267324	XM_001479637.1	2310010M20Rik	XP_001479687.1	ILMN_2759380	006650309	S	637	CAGGCTCTACAGGATGGATTGCTTAGAGCTGTTCAGATCATCGAGAAGGG	16	+	32274124-32274173	16qB2	PREDICTED: Mus musculus RIKEN cDNA 2310010M20 gene (2310010M20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_204449	ILMN_204449	A830042C15RIK	ri|A830042C15|PX00155F22|AK043859|3323					AK043859	A830042C15Rik		ILMN_2565067	003520204	S	3210	CAGCTGCCTGGGCCTTTAGGGGATGGGAACCACTCTGCGAATGCCTGGCA										
Mus musculus	RefSeq	ILMN_209886	ILMN_209886	LYPD4	NM_182785.3	NM_182785.3		232973	146198596	NM_182785.3	Lypd4	NP_877586.1	ILMN_2600135	003390564	S	989	GTTCTCTTATGCCTTCTTATACTCCTCAGAGATTGACCACCCAGCAGGAC				7qA3	Mus musculus Ly6/Plaur domain containing 4 (Lypd4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			MGC58778; 4933400F01Rik	MGC58778; 4933400F01Rik
Mus musculus	Riken	ILMN_206840	ILMN_206840	4930438B07RIK	ri|E230038I07|PX00210L08|AK087661|2149					AK087661	4930438B07Rik		ILMN_1220162	004920446	S	1977	CTGCCCTGTGGTGGCAGTGTATGTGATGTCTTTGAGGATGGCCAGAGTGG										
Mus musculus	RefSeq	ILMN_222088	ILMN_222088	SPDEF	NM_013891.3	NM_013891.3		30051	141802606	NM_013891.3	Spdef	NP_038919.1	ILMN_1258162	002970368	S	1459	GCTGGTATCCCAGAACCCAAGGTCCCAGATAGACAGCCACTGATCTAGGG	17	-	27854166-27854215	17qA3.3	Mus musculus SAM pointed domain containing ets transcription factor (Spdef), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Pse; PDEF	Pse; PDEF
Mus musculus	RefSeq	ILMN_201554	ILMN_229013	SNRPA	NM_001046637.1	NM_001046637.1		53607	114052540	NM_001046637.1	Snrpa	NP_001040102.1	ILMN_2667509	001690039	S	1139	CAGTCCCTGAAGGTAAGTCCCCCTTAGGGACCTTCTCAGAGCCGTGTGTG	7	-	27972125-27972174	7qA3	Mus musculus small nuclear ribonucleoprotein polypeptide A (Snrpa), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	U1A; C430021M15Rik; Rnu1a1; Rnu1a-1	U1A; C430021M15Rik; Rnu1a1; Rnu1a-1
Mus musculus	RefSeq	ILMN_220252	ILMN_220252	SHFM1	NM_009169.2	NM_009169.2		20422	146198561	NM_009169.2	Shfm1	NP_033195.1	ILMN_1239370	005870600	S	342	CAATCATGGACTCTACCACAGTCTAGGACAGAGAAAGCAGGACGGGATAC				6qA1	Mus musculus split hand/foot malformation (ectrodactyly) type 1 (Shfm1), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Shfdg1; Shfg; DSS1	Shfdg1; Shfg; DSS1
Mus musculus	RefSeq	ILMN_220553	ILMN_220553	MOSPD1	NM_027409.1	NM_027409.1		70380	21312579	NM_027409.1	Mospd1	NP_081685.1	ILMN_3006930	003180414	S	1264	GGAGCTGCTGTGGTGTTTCTAAGGGGAAACAGTCAGTGTGTGAGGGGTTG	X	-	49590087-49590136	XqA5	Mus musculus motile sperm domain containing 1 (Mospd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	1810018L05Rik; MGC103065	1810018L05Rik; MGC103065
Mus musculus	RefSeq	ILMN_220553	ILMN_220553	MOSPD1	NM_027409.1	NM_027409.1		70380	21312579	NM_027409.1	Mospd1	NP_081685.1	ILMN_3006931	000990349	S	1664	AGCCAAGTAGAGAAAGCCCTAGATGCCCGTGTCTATTTTGTATTGGCCAC	X	-	49589687-49589736	XqA5	Mus musculus motile sperm domain containing 1 (Mospd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	1810018L05Rik; MGC103065	1810018L05Rik; MGC103065
Mus musculus	RefSeq	ILMN_211052	ILMN_211052	EXO1	NM_012012.2	NM_012012.2		26909	31560510	NM_012012.2	Exo1	NP_036142.2	ILMN_2873522	000270445	S	3149	GTTCCTTTGCATTTACTTAACCCTGTGCAAGATGCTGAAGCTGCAGAGCC	1	+	177745734-177745783	1qH4	Mus musculus exonuclease 1 (Exo1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence ISA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end [goid 8409] [evidence ISA]; Interacting selectively with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding [goid 43566] [evidence IDA]	Msa	Msa
Mus musculus	RefSeq	ILMN_188614	ILMN_257971	THUMPD2	XM_918052.2	XM_918052.2		72167	94403119	XM_918052.2	Thumpd2	XP_923145.1	ILMN_1214378	000620176	S	1379	GCATCACCTTCACAAAGAGCAAGTAGCGTGCAGTGTCTGGGCAGGATGCG				17qE3	PREDICTED: Mus musculus THUMP domain containing 2, transcript variant 6 (Thumpd2), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217380	ILMN_253319	IL1RN	NM_001039701.2	NM_001039701.2		16181	142386158	NM_001039701.2	Il1rn	NP_001034790.1	ILMN_2682566	003390253	S	29	CCTCGGGATGGAAATCTGCTGGGGACCCTACAGTCACCTAATCTCTCTCC	2	+	24200966-24200972:24200973-24201015	2qA3	Mus musculus interleukin 1 receptor antagonist (Il1rn), transcript variant 2, mRNA.	Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Blocks the binding of interleukin-1 to the interleukin-1 receptor complex [goid 5152] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]	IL-1ra; F630041P17Rik	IL-1ra; F630041P17Rik
Mus musculus	RefSeq	ILMN_215615	ILMN_215615	GYG	NM_013755.2	NM_013755.2		27357	114326475	NM_013755.2	Gyg	NP_038783.1	ILMN_2661635	006020301	S	653	TGCCATTTGTGTATAACCTAAGCAGCATTTCAATATACTCCTACCTCCCG	3	-	20037913-20037962	3qA2	Mus musculus glycogenin (Gyg), mRNA.		The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]	Catalysis of the reaction: UDP-glucose + glycogenin = UDP + glucosylglycogenin [goid 8466] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AU017667; Gyg1	AU017667; Gyg1
Mus musculus	RefSeq	ILMN_215615	ILMN_215615	GYG	NM_013755.2	NM_013755.2		27357	114326475	NM_013755.2	Gyg	NP_038783.1	ILMN_2686069	001050475	S	1079	AGAGAAAACTTGACACTTACCTGCAATAGAAGCACTGCCATTTTCCTGTG	3	-	20022555-20022576:20022577-20022604	3qA2	Mus musculus glycogenin (Gyg), mRNA.		The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]	Catalysis of the reaction: UDP-glucose + glycogenin = UDP + glucosylglycogenin [goid 8466] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AU017667; Gyg1	AU017667; Gyg1
Mus musculus	RefSeq	ILMN_199123	ILMN_199123	LOC216674	XM_126090.3	XM_126090.3			38091328	XM_126090.3	LOC216674		ILMN_1244066	006180519	S	505	CAATCGGTGTCTCCAACTTCAACCCTCAAGTGGCTTGCACCTGTTCTTTC										
Mus musculus	RefSeq	ILMN_222924	ILMN_237097	5730409G15RIK	NM_027446.2	NM_027446.2		70511	141803575	NM_027446.2	5730409G15Rik	NP_081722.1	ILMN_1220881	005570408	S	1687	TTCCTGCCGGGGCTTTTGAGTGCCCCCTAGTGGTCATAAGCCTGAGGACA	16	-	5244651-5244700	16qA1	Mus musculus RIKEN cDNA 5730409G15 gene (5730409G15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221828	ILMN_237097	5730409G15RIK	NM_027446.2	NM_027446.2		70511	141803575	NM_027446.2	5730409G15Rik	NP_081722.1	ILMN_1254549	003140358	S	643	TAGAGCCGCACACCCCCATTGACGCAGGCAGCTCGAAGGTGACAGTGGCT	16	-	5248727-5248776	16qA1	Mus musculus RIKEN cDNA 5730409G15 gene (5730409G15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200708	ILMN_246909	A630073D07RIK	XM_993420.2	XM_993420.2		381819	149255358	XM_993420.2	A630073D07Rik	XP_998514.1	ILMN_1234397	001340324	S	238	GCAGGTGCAGCAGGAAAACCAGCCTCTACAGTCAAAACAGAAGCAGCCAC	6	-	132576553-132576602	6qG1	PREDICTED: Mus musculus RIKEN cDNA A630073D07 gene (A630073D07Rik), mRNA.					
Mus musculus	MEEBO	ILMN_189730	ILMN_189730	5430434G16RIK	scl47301.1.1_254						5430434G16Rik		ILMN_1258364	002570689	S	20	TGAAGTCCCTCATAAGTTTCAGTCTAGCCATTGGGCACCCAGTCCTGGAG										
Mus musculus	RefSeq	ILMN_184759	ILMN_230740	GM1066	XM_355758.5	XM_355758.5		381762	94377285	XM_355758.5	Gm1066	XP_355758.5	ILMN_2421337	003360639	S	291	CATCTCTGGACATCTCTCTGTGGCCTGGTATCAACAGACTCAGGGGCAGG	6	+	41048761-41048810		PREDICTED: Mus musculus gene model 1066, (NCBI) (Gm1066), mRNA.					
Mus musculus	RefSeq	ILMN_210441	ILMN_210441	HPRT1	NM_013556.2	NM_013556.2		15452	96975137	NM_013556.2	Hprt1	NP_038584.2	ILMN_2767487	000870689	S	189	CCAGGTTATGACCTAGATTTGTTTTGTATACCTAATCATTATGCCGAGGA	X	+	50352283-50352332	XqA5	Mus musculus hypoxanthine guanine phosphoribosyl transferase 1 (Hprt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IGI]; The chemical reactions and pathways involving hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46100] [evidence IC ]; The chemical reactions and pathways involving hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46100] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex [goid 21895] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IMP]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IGI]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IMP]; Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis [goid 6168] [evidence IMP]; Any process that generates guanine, 2-amino-6-hydroxypurine, from derivatives of it without de novo synthesis [goid 6178] [evidence IMP]; The chemical reactions and pathways involving hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46100] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking [goid 21756] [evidence IMP]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IGI]; The chemical reactions and pathways involving adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine [goid 46083] [evidence IGI]; The chemical reactions and pathways involving adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine [goid 46083] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IMP]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 45964] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	C81579; MGC103149; Hprt; HPGRT	C81579; MGC103149; Hprt; HPGRT
Mus musculus	RefSeq	ILMN_210441	ILMN_210441	HPRT1	NM_013556.2	NM_013556.2		15452	96975137	NM_013556.2	Hprt1	NP_038584.2	ILMN_2704499	001940482	S	955	TTGCTGCGTCCCCAGACTTTTGATTTGCACTATGAGCCTATAGGCCAGCC	X	+	50374443-50374492	XqA5	Mus musculus hypoxanthine guanine phosphoribosyl transferase 1 (Hprt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IGI]; The chemical reactions and pathways involving hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46100] [evidence IC ]; The chemical reactions and pathways involving hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46100] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex [goid 21895] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IMP]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IGI]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IMP]; Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis [goid 6168] [evidence IMP]; Any process that generates guanine, 2-amino-6-hydroxypurine, from derivatives of it without de novo synthesis [goid 6178] [evidence IMP]; The chemical reactions and pathways involving hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46100] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking [goid 21756] [evidence IMP]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IGI]; The chemical reactions and pathways involving adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine [goid 46083] [evidence IGI]; The chemical reactions and pathways involving adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine [goid 46083] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IMP]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 45964] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	C81579; MGC103149; Hprt; HPGRT	C81579; MGC103149; Hprt; HPGRT
Mus musculus	RefSeq	ILMN_210441	ILMN_210441	HPRT1	NM_013556.2	NM_013556.2		15452	96975137	NM_013556.2	Hprt1	NP_038584.2	ILMN_2776552	004060703	S	699	GACAAGTTTGTTGTTGGATATGCCCTTGACTATAATGAGTACTTCAGGGA	X	+	50373520-50373569	XqA5	Mus musculus hypoxanthine guanine phosphoribosyl transferase 1 (Hprt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IGI]; The chemical reactions and pathways involving hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46100] [evidence IC ]; The chemical reactions and pathways involving hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46100] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex [goid 21895] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IMP]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IGI]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IMP]; Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis [goid 6168] [evidence IMP]; Any process that generates guanine, 2-amino-6-hydroxypurine, from derivatives of it without de novo synthesis [goid 6178] [evidence IMP]; The chemical reactions and pathways involving hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46100] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking [goid 21756] [evidence IMP]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IGI]; The chemical reactions and pathways involving adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine [goid 46083] [evidence IGI]; The chemical reactions and pathways involving adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine [goid 46083] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IMP]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 45964] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	C81579; MGC103149; Hprt; HPGRT	C81579; MGC103149; Hprt; HPGRT
Mus musculus	RefSeq	ILMN_197783	ILMN_197783	LOC212390	XM_131360.3	XM_131360.3			38078097	XM_131360.3	LOC212390		ILMN_1240069	007100059	S	1396	CCCTTTGCTTCCAACGGCATAGCGGCGTGCTTCCTTCCGGCTCCGTATTT										
Mus musculus	RefSeq	ILMN_198589	ILMN_313324	LOC100047498	XM_001478274.1	XM_001478274.1		100047498	149271316	XM_001478274.1	LOC100047498	XP_001478324.1	ILMN_1236525	006450463	S	925	AGGGGGCAGTCATACGTCACTGAACACCTAGTAAGACACACCCAAGAGAG					PREDICTED: Mus musculus similar to ZFP206 (LOC100047498), mRNA.					
Mus musculus	RefSeq	ILMN_212863	ILMN_212863	OLFR350	NM_146627.1	NM_146627.1		258620	33239295	NM_146627.1	Olfr350	NP_666838.1	ILMN_2631106	007200747	S	785	CTTCATCCTTTACTTCTACTGACAAGGGCATAGTTGCTTCTGTGATGTAC	2	+	36706352-36706401	2qB	Mus musculus olfactory receptor 350 (Olfr350), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR136-13	MOR136-13
Mus musculus	RefSeq	ILMN_217480	ILMN_217480	SUCLG1	NM_019879.1	NM_019879.1		56451	9845298	NM_019879.1	Suclg1	NP_063932.1	ILMN_3002872	007570706	S	1111	CTGGTTGGTCTCTCAGTATGTGGGAAATCCAGGCAAGTTTTAGAATGTCC	6	+	73206303-73206352	6qC1	Mus musculus succinate-CoA ligase, GDP-forming, alpha subunit (Suclg1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ADP + phosphate + acetyl-CoA + oxaloacetate = ATP + citrate + CoA [goid 3878] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate [goid 4775] [evidence IEA]; Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate [goid 4776] [evidence IEA]	Sucla1; 1500000I01Rik	Sucla1; 1500000I01Rik
Mus musculus	RefSeq	ILMN_214261	ILMN_228617	D830030K20RIK	NM_177135.3	NM_177135.3		320333	141801589	NM_177135.3	D830030K20Rik	NP_796109.1	ILMN_1249900	006510471	S	989	GCGGATCAACAATTTTGGTAATAAAACAAGAAACAAACACTTGTCTCAGG	14	+	3233928-3233977	14qA1	Mus musculus RIKEN cDNA D830030K20 gene (D830030K20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220651	ILMN_220651	PCDHA3	NM_138662.1	NM_138662.1		192163	21426880	NM_138662.1	Pcdha3	NP_619603.1	ILMN_2724856	001030097	S	2308	CCATGCCCAGTTAATCAAGATAAAGAAGACAAACTGGTTGGAGACATTGA	18	+	37108168-37108217	18qB2-qB3	Mus musculus protocadherin alpha 3 (Pcdha3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0345	mKIAA0345
Mus musculus	Riken	ILMN_203071	ILMN_203071	C330018M05RIK	ri|C330018M05|PX00076H23|AK049278|2060					AK049278	C330018M05Rik		ILMN_1238124	003190564	S	1917	GCCCCTCTCTAGGCCATTCTTGTTCCCAGAGTATCAGTCAGGATTCTCCA										
Mus musculus	MEEBO	ILMN_192823	ILMN_192823	1700021J08RIK	scl23945.2.1_226						1700021J08Rik		ILMN_1231258	000270064	S	9	TTCTCCTACCTGCTCCTTGCTCTCCTCTAGCCGCGCCTTCCGCACCAGCT										
Mus musculus	RefSeq	ILMN_223054	ILMN_223054	MRPS17	NM_025450.3	NM_025450.3		66258	146135076	NM_025450.3	Mrps17	NP_079726.1	ILMN_2758690	006510603	S	835	GCCTAAGGATGCGGCATCATTTTGTGAGCTCTCTGTCCTGGATCGTATGT				5qG1.3	Mus musculus mitochondrial ribosomal protein S17 (Mrps17), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Mprs17; 1810006P02Rik	Mprs17; 1810006P02Rik
Mus musculus	RefSeq	ILMN_209567	ILMN_209567	SNAP91	NM_013669.1	NM_013669.1		20616	7305506	NM_013669.1	Snap91	NP_038697.1	ILMN_2597032	003460414	S	1928	CGCCACGAGGGGCCTCTCCGGTGCCTGAGAGTTCTCTCACTGCTGACCTC	9	-	86686795-86686844	9qE3.1	Mus musculus synaptosomal-associated protein 91 (Snap91), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes [goid 30118] [evidence IEA]	The process by which clathrin triskelia are assembled into the ordered structure known as a clathrin cage [goid 48268] [evidence IEA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]; Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence IEA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IEA]	F1-20; AP180; mKIAA0656; 91kDa	F1-20; AP180; mKIAA0656; 91kDa
Mus musculus	RefSeq	ILMN_209567	ILMN_209567	SNAP91	NM_013669.1	NM_013669.1		20616	7305506	NM_013669.1	Snap91	NP_038697.1	ILMN_1247504	005670093	S	3358	CGGTGTGGAGTACATTTTTCCAATCACAGAAACTTCCAACTTGTTGTGAG	9	-	86660042-86660091	9qE3.1	Mus musculus synaptosomal-associated protein 91 (Snap91), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes [goid 30118] [evidence IEA]	The process by which clathrin triskelia are assembled into the ordered structure known as a clathrin cage [goid 48268] [evidence IEA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]; Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence IEA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IEA]	F1-20; AP180; mKIAA0656; 91kDa	F1-20; AP180; mKIAA0656; 91kDa
Mus musculus	RefSeq	ILMN_197913	ILMN_197913	LOC272714	XM_195278.2	XM_195278.2			38079594	XM_195278.2	LOC272714		ILMN_1232519	001070326	S	748	GGCTGCCAAGAGGAGGAAAATGAGCCAGAAAGGGGATGGAAAAGTACTGT										
Mus musculus	RefSeq	ILMN_199218	ILMN_232262	LOC632784	XM_907012.2	XM_907012.2		632784	94391148	XM_907012.2	LOC632784	XP_912105.2	ILMN_1217111	001030647	S	4755	CAGGGACTTGGACACTGTGCTTGAGAAGATGGACATAGAACTCACCGAAG				11qE1	PREDICTED: Mus musculus similar to Stretchin-Mlck CG18255-PA, isoform A (LOC632784), mRNA.					
Mus musculus	RefSeq	ILMN_217761	ILMN_217761	ACAT2	NM_009338.3	NM_009338.3		110460	148747460	NM_009338.3	Acat2	NP_033364.2	ILMN_1253008	000110661	S	1853	TTCCAGGCTGAGGTGGGGTAGGTATTCCAGCTGTTCTAGTCAGAAGACTG				17qA1	Mus musculus acetyl-Coenzyme A acetyltransferase 2 (Acat2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: 2 acetyl-CoA = CoA + acetoacetyl-CoA [goid 3985] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AW742799; Tcp1-rs1; Tcp-1x	AW742799; Tcp1-rs1; Tcp-1x
Mus musculus	RefSeq	ILMN_194077	ILMN_250011	C330011F01RIK	XM_001005388.1	XM_001005388.1		78605	94420171	XM_001005388.1	C330011F01Rik	XP_001005388.1	ILMN_2503166	002600021	S	4540	CAGTTGACCATCATCTGGCCACCAGCCAAGCTGCTGACAGCAAACTGCTA					PREDICTED: Mus musculus RIKEN cDNA C330011F01 gene (C330011F01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210029	ILMN_254859	CCNL2	NM_207678.1	NM_207678.1		56036	46592876	NM_207678.1	Ccnl2	NP_997561.1	ILMN_2601488	007050561	S	2053	TAAAAGCTATATACGAGAACTCAGAATTTTGATTCTGTTAGCTTAACACT	4	+	155195198-155195223:155195673-155195696	4qE2	Mus musculus cyclin L2 (Ccnl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700010A01Rik; 1810019L15Rik; HCLA-150; AW261738; SB138; MGC21593; AA409936; 2010319M22Rik; Pcee; Ania-6b	1700010A01Rik; 1810019L15Rik; HCLA-150; AW261738; SB138; MGC21593; AA409936; 2010319M22Rik; Pcee; Ania-6b
Mus musculus	Riken	ILMN_205972	ILMN_205972	D130067N01RIK	ri|D130067N01|PX00185D18|AK051726|2431					AK051726	D130067N01Rik		ILMN_1236975	002360224	S	2376	GCTCATCAAGGACATGGTGAACGATGGGAGTAGACATGTCACATCCTCAG										
Mus musculus	RefSeq	ILMN_218436	ILMN_218436	DDIT4L	NM_030143.3	NM_030143.3		73284	141803339	NM_030143.3	Ddit4l	NP_084419.2	ILMN_2695819	003120309	S	2497	TGGTGAGGCTTCTCAGGCATGGACATAGATCTTTTACCCGTTAGCAGTTC	3	+	137291136-137291185	3qG3	Mus musculus DNA-damage-inducible transcript 4-like (Ddit4l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RTP801L; 1700108M02Rik; 1700037B15Rik; Smhs1; REDD2	RTP801L; 1700108M02Rik; 1700037B15Rik; Smhs1; REDD2
Mus musculus	RefSeq	ILMN_221431	ILMN_221431	MS4A4D	NM_025658.4	NM_025658.4		66607	142374560	NM_025658.4	Ms4a4d	NP_079934.2	ILMN_2735547	000630431	S	1099	CTCTAAATAAGTAAGTCAAGCATTTATTAAGTCAATAACACTTTAAAATC	19	+	11632591-11632640	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 4D (Ms4a4d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2210417J23Rik	2210417J23Rik
Mus musculus	RefSeq	ILMN_213624	ILMN_213624	TAS2R123	NM_207025.1	NM_207025.1		353167	46309580	NM_207025.1	Tas2r123	NP_996908.1	ILMN_1214541	003830403	S	829	GGATTGATGGAGAAAATAGTGATACTGATATTTGACCACATTTCTGGAGC	6	+	132797988-132798037	6qG1	Mus musculus taste receptor, type 2, member 123 (Tas2r123), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mt2r55; mGR23; Tas2r23; t2r55; STC 9-2; T2R23	mt2r55; mGR23; Tas2r23; t2r55; STC 9-2; T2R23
Mus musculus	RefSeq	ILMN_224221	ILMN_236446	MAD2L1	NM_019499.4	NM_019499.4		56150	146134513	NM_019499.4	Mad2l1	NP_062372.2	ILMN_2776857	004290487	S	1458	AAGTTTTTCTACCTACAGTGACCATTGTTAAAGGAATCCATCCCACAGTG				6qC1	Mus musculus MAD2 (mitotic arrest deficient, homolog)-like 1 (yeast) (Mad2l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The microtubule organizing center in fungi; functionally homologous to the animal cell centrosome [goid 5816] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IMP]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence IMP]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of the mitotic metaphase to anaphase transition [goid 45841] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MAD2; MGC113763; AA673185	MAD2; MGC113763; AA673185
Mus musculus	RefSeq	ILMN_198140	ILMN_198140	LOC268934	XM_196179.2	XM_196179.2			38082123	XM_196179.2	LOC268934		ILMN_1252806	000990170	S	3152	GAAGTGCTCGAAGTGCTGCGTCCTCCTGGTGGCCTGAACCAAACCGTGAT										
Mus musculus	MEEBO	ILMN_211963	ILMN_211963	MYST4	scl000310.1_168				8567375	NM_017479	Myst4		ILMN_1230880	002060100	S	789	AGCAGAGGTTGCGGCTAGGGGCCAAGCGTGCTGTGAACAATGGGAGGTTA						A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IDA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the addition of an acetyl group to a histone, specific for histones H3 and H4 [goid 4406] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211963	ILMN_211963	MYST4	scl000310.1_168				8567375	NM_017479	Myst4		ILMN_2743320	001980626	S	790	GCAGAGGTTGCGGCTAGGGGCCAAGCGTGCTGTGAACAATGGGAGGTTAC						A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IDA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the addition of an acetyl group to a histone, specific for histones H3 and H4 [goid 4406] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211091	ILMN_311090	HNRNPAB	NM_001048061.1	NM_001048061.1		15384	146260279	NM_001048061.1	Hnrnpab	NP_001041526.1	ILMN_2612423	002570564	S	1686	AAGGTATTTTACACGTGTCCTGATTTTGCCACGACCTGGATATTGAAGCT				11qB1.3	Mus musculus heterogeneous nuclear ribonucleoprotein A/B (Hnrnpab), transcript variant 1, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	3010025C11Rik; Cgbfa; CBF-A	3010025C11Rik; Cgbfa; CBF-A
Mus musculus	RefSeq	ILMN_216011	ILMN_236273	OLFR632	NM_147119.1	NM_147119.1		259123	22128750	NM_147119.1	Olfr632	NP_667330.1	ILMN_2666320	005570161	S	795	GCACAGATTTGGACAGCACACCTCACCCCTGGTGCACATCCTAATGGGCA	7	+	111086690-111086739	7qE3	Mus musculus olfactory receptor 632 (Olfr632), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR2-1; MGC123789	MOR2-1; MGC123789
Mus musculus	RefSeq	ILMN_222942	ILMN_222942	CRISP1	NM_009638.2	NM_009638.2		11571	31981913	NM_009638.2	Crisp1	NP_033768.2	ILMN_1233492	000510475	S	674	TACTAACTGTAAATATCTGAAGAAGATGCTATCCTGTGAACATGAACTTC	17	-	40431382-40431431	17qB2	Mus musculus cysteine-rich secretory protein 1 (Crisp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]			CRISP-1; Aeg1; AW324342	CRISP-1; Aeg1; AW324342
Mus musculus	RefSeq	ILMN_222942	ILMN_222942	CRISP1	NM_009638.2	NM_009638.2		11571	31981913	NM_009638.2	Crisp1	NP_033768.2	ILMN_2934792	001500347	S	1148	TCTAGCTCTACCTAGTTTACTCTCTCTGGAGAAAATCACATTAATCGTCT	17	-	40430908-40430957	17qB2	Mus musculus cysteine-rich secretory protein 1 (Crisp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]			CRISP-1; Aeg1; AW324342	CRISP-1; Aeg1; AW324342
Mus musculus	RefSeq	ILMN_211133	ILMN_211133	GIMAP6	NM_153175.3	NM_153175.3		231931	57863243	NM_153175.3	Gimap6	NP_694815.1	ILMN_1224859	006650477	S	1547	CCCCTGTGTGCTGTCTCCCCTGTGCTCCACCATAAGTCCCCAATAAAGCC	6	-	48651597-48651646	6qB2.3	Mus musculus GTPase, IMAP family member 6 (Gimap6), mRNA.			Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	FLJ00102; MGC41522; Ian6; mFLJ00102; 4833419H03Rik	FLJ00102; MGC41522; Ian6; mFLJ00102; 4833419H03Rik
Mus musculus	RefSeq	ILMN_236603	ILMN_236603	OLFR792	NM_001011849.1	NM_001011849.1		258150	58801455	NM_001011849.1	Olfr792	NP_001011849.1	ILMN_3160778	003190753	S	365	TGGCTATCTGTAAGCCCTTGCATTACACCACAATAATGAGCAGCAGGGTC	10	+	128977959-128978008	10qD3	Mus musculus olfactory receptor 792 (Olfr792), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR108-2	MOR108-2
Mus musculus	MEEBO	ILMN_189483	ILMN_189483	IGHV1S20_K02153_IG_HEAVY_VARIABLE_1S20_37	IGHV1S20_K02153_Ig_heavy_variable_1S20_37						IGHV1S20_K02153_Ig_heavy_variable_1S20_37		ILMN_2461651	006520564	S	2	ATTCACAAGCTACGGTATAAACTGGGTGAAACAGAGGCCTGGACAGGGCC										
Mus musculus	RefSeq	ILMN_188267	ILMN_231968	4930515G16RIK	NR_003100.1	NR_003100.1		75070	110347557	NR_003100.1	4930515G16Rik		ILMN_1226493	006400497	S	210	CTGCAGTCCAAAGATCTCATTGTCCTCTCAGTAGGGGTCAGCTCAGAATC	6	-	67515434-67515483	6qC1	Mus musculus RIKEN cDNA 4930515G16 gene (4930515G16Rik), non-coding RNA.					
Mus musculus	RefSeq	ILMN_251969	ILMN_251969	THNSL1	NM_001001297.2	NM_001001297.2		208967	68533240	NM_001001297.2	Thnsl1	NP_001001297.1	ILMN_3130652	001740494	A	2070	CCCTGTACAGTGCACAAAACCCTGGGTTCCATCCTTAGCACCTAGGAAGG	2	+	21136379-21136428	2qA3	Mus musculus threonine synthase-like 1 (bacterial) (Thnsl1), transcript variant 2, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins [goid 9088] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: ATP + shikimate = ADP + shikimate 3-phosphate [goid 4765] [evidence IEA]; Catalysis of the reaction: O-phospho-L-homoserine + H2O = L-threonine + phosphate [goid 4795] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AW413632	AW413632
Mus musculus	RefSeq	ILMN_208944	ILMN_208944	METRNL	NM_144797.2	NM_144797.2		210029	31542188	NM_144797.2	Metrnl	NP_659046.1	ILMN_2813221	002570674	S	2107	GGCATTGCTTTCCCTGCCATGTGACTTCTGCCTTGTATGTGAGGGCCTGT	11	+	121533118-121533167	11qE2	Mus musculus meteorin, glial cell differentiation regulator-like (Metrnl), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			9430048M07Rik; BC019776; MGC25696	9430048M07Rik; BC019776; MGC25696
Mus musculus	RefSeq	ILMN_208944	ILMN_208944	METRNL	NM_144797.2	NM_144797.2		210029	31542188	NM_144797.2	Metrnl	NP_659046.1	ILMN_2813224	005220672	S	2320	TACAAAGGACCTGTGTTCGATTCCCATGTTGGGAACTCATGTTAGGTGGC	11	+	121533331-121533380	11qE2	Mus musculus meteorin, glial cell differentiation regulator-like (Metrnl), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			9430048M07Rik; BC019776; MGC25696	9430048M07Rik; BC019776; MGC25696
Mus musculus	RefSeq	ILMN_211686	ILMN_211686	CAMK2A	NM_009792.2	NM_009792.2		12322	118130259	NM_009792.2	Camk2a	NP_033922.1	ILMN_2618525	000160070	S	232	AAGTCTCTCGCTGGTTGCCAAGCCAGCTCTGCTCCGACAGTCCACTACTC	18	+	61123439-61123488	18qE1	Mus musculus calcium/calmodulin-dependent protein kinase II alpha (Camk2a), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a glutamate receptor [goid 35254] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	R74975; CaMKII; mKIAA0968	R74975; CaMKII; mKIAA0968
Mus musculus	RefSeq	ILMN_219620	ILMN_219620	KISS1R	NM_053244.4	NM_053244.4		114229	146149203	NM_053244.4	Kiss1r	NP_444474.1	ILMN_2711356	003370121	S	2799	CGTGCTGCGCACCCTGTGCGGATCAGGAGCCCGGAGCCTGGGAACCCTGT				10qC1	Mus musculus KISS1 receptor (Kiss1r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IPI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISO]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IDA]	Gpr54	Gpr54
Mus musculus	Riken	ILMN_206359	ILMN_206359	C430015A10RIK	ri|C430015A10|PX00078D02|AK082906|2666					AK082906	C430015A10Rik		ILMN_1244995	000630703	S	2318	ACGTGGTAATGAGGCTCTGGGAGAGCAGCCAATCAGGTGTGGACACGCCA										
Mus musculus	RefSeq	ILMN_190490	ILMN_242974	LOC627985	XM_905813.3	XM_905813.3		627985	149253422	XM_905813.3	LOC627985	XP_910906.1	ILMN_2737319	002450315	S	138	TCAACCCCGTGGAGTTCAACCCGGAGTTCGTGGCGCGGATGATCCCCAAA				4qE2	PREDICTED: Mus musculus hypothetical LOC627985 (LOC627985), mRNA.					
Mus musculus	Riken	ILMN_205301	ILMN_205301	4732419E09RIK	ri|4732419E09|PX00313O05|AK028622|2330					AK028622	4732419E09Rik		ILMN_2571527	006550347	S	1808	CAGCTGGCCACTAGTCGATTGTAGATTCTCAGTCTGCTTCCCTAGCTGGC										
Mus musculus	RefSeq	ILMN_220035	ILMN_220035	PMVK	NM_026784.2	NM_026784.2		68603	142350475	NM_026784.2	Pmvk	NP_081060.1	ILMN_1227596	000670025	S	622	GCCAAACTTTAGTGATGAGGCTTGAGGGGACGAGCAGAGACTGATGGGCC	3	+	89272561-89272572:89272573-89272610	3qF1	Mus musculus phosphomevalonate kinase (Pmvk), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + (R)-5-phosphomevalonate = ADP + (R)-5-diphosphomevalonate [goid 4631] [evidence IDA]	2900002L22Rik; 1110011E12Rik; PMK; PMKASE; PMKA; AV001327	2900002L22Rik; 1110011E12Rik; PMK; PMKASE; PMKA; AV001327
Mus musculus	Riken	ILMN_207395	ILMN_207395	EEFSEC	ri|E130307A03|PX00675K06|AK087501|2209					AK087501	Eefsec		ILMN_2587281	004890039	S	1571	CCTTCGGCCAAAGTGGCAAGTTCAAGATCCACATCACTGAACAAGATGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [evidence IMP]; The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [evidence IDA]; The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IDA]; Interacting selectively with transfer RNA [goid 49] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215269	ILMN_316397	LOC100042514	XM_001478360.1	XM_001478360.1		100042514	149251276	XM_001478360.1	LOC100042514	XP_001478410.1	ILMN_2657431	005260053	S	396	GAAGGCCTCCCAGTCATCAGGACCAGGGGAAGTGAAAGAAATCTGTCTCA	3	+	92092775-92092824	3qF1	PREDICTED: Mus musculus hypothetical protein LOC100042514 (LOC100042514), mRNA.					
Mus musculus	RefSeq	ILMN_246045	ILMN_246045	NGFR	NM_033217.3	NM_033217.3		18053	118131161	NM_033217.3	Ngfr	NP_150086.2	ILMN_2851288	004050064	S	3218	GGTTCTGGGGGTCTCTCCAGCCTTATTTTGGGTCAAGATGGAACCTCTGG	11	-	95430273-95430322	11qD	Mus musculus nerve growth factor receptor (TNFR superfamily, member 16) (Ngfr), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42488] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The series of events in which a temperature stimulus (hot or cold) is received and converted into a molecular signal [goid 16048] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of hair follicle development [goid 51799] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40037] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with nerve growth factor [goid 48406] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 5035] [evidence IDA]	p75; LNGFR; p75NTR; Tnfrsf16; p75NGFR	p75; LNGFR; p75NTR; Tnfrsf16; p75NGFR
Mus musculus	RefSeq	ILMN_190505	ILMN_225937	KCTD12	NM_177715.4	NM_177715.4		239217	123701965	NM_177715.4	Kctd12	NP_808383.3	ILMN_1237224	000520193	S	5685	GGGTTCTGACATGTTGAAATTGTTATTTGCTAAGCGATACCTTTGAGCTG	14	-	103376120-103376169	14qE2.3	Mus musculus potassium channel tetramerisation domain containing 12 (Kctd12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	AW538430; Pfetin; AU046135; Pfet1	AW538430; Pfetin; AU046135; Pfet1
Mus musculus	RefSeq	ILMN_190505	ILMN_225937	KCTD12	NM_177715.4	NM_177715.4		239217	123701965	NM_177715.4	Kctd12	NP_808383.3	ILMN_2736783	005270743	S	4691	CCCAGAGACAACTGGCAGTGCTTACAACGTGGTCTAATTTCTATGGCCGT	14	-	103377114-103377163	14qE2.3	Mus musculus potassium channel tetramerisation domain containing 12 (Kctd12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	AW538430; Pfetin; AU046135; Pfet1	AW538430; Pfetin; AU046135; Pfet1
Mus musculus	RefSeq	ILMN_210794	ILMN_230976	2700046A07RIK	XM_984603.2	XM_984603.2		78449	149270124	XM_984603.2	2700046A07Rik	XP_989697.1	ILMN_1214052	007150746	S	1749	CACGTGTTTAGCCATGTGATGCTTATGAGACAGAATCCCACAGCAGGACG				18qE1	PREDICTED: Mus musculus RIKEN cDNA 2700046A07 gene (2700046A07Rik), mRNA.					
Mus musculus	Riken	ILMN_203809	ILMN_203809	LRP1B	ri|A330041P21|PX00132C15|AK039425|4066					AK039425	Lrp1b		ILMN_1224579	004590048	S	3329	GGGAGACCCATCCTGTGGTCAGGTATACAAGGAGCCAGAGAACATAAGAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222726	ILMN_222726	RNF183	NM_153504.3	NM_153504.3		76072	141801750	NM_153504.3	Rnf183	NP_705724.1	ILMN_2753932	004200523	S	655	ATGTCATCCTAGAGGGCCACCAGCTCTGTCTCAAGGACCAGCCCAAGAGC	4	-	62089275-62089324	4qB3	Mus musculus ring finger protein 183 (Rnf183), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5830442J12Rik	5830442J12Rik
Mus musculus	RefSeq	ILMN_218724	ILMN_218724	PPP1R7	NM_023200.1	NM_023200.1		66385	12963568	NM_023200.1	Ppp1r7	NP_075689.1	ILMN_2699451	004260440	S	3345	AATACCAATTAATGTTATAAAGATTCAATTGTATATATTCCTGGATTTCT	1	+	95197716-95197765	1qD	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 7 (Ppp1r7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310014J01Rik; SDS22	2310014J01Rik; SDS22
Mus musculus	RefSeq	ILMN_218595	ILMN_218595	BCL2L10	NM_013479.1	NM_013479.1		12049	7304926	NM_013479.1	Bcl2l10	NP_038507.1	ILMN_1215546	003850630	S	599	GGCTTTTGCCGCTTCTTCAAGAATCCTTTACCGCTCGGCTTCTGGAGAAG	9	+	75198846-75198895	9qD	Mus musculus Bcl2-like 10 (Bcl2l10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO];  [goid 8625] [evidence ISO]		C85687; AU023065; Diva; Boo; AA420380	C85687; AU023065; Diva; Boo; AA420380
Mus musculus	RefSeq	ILMN_218595	ILMN_218595	BCL2L10	NM_013479.1	NM_013479.1		12049	7304926	NM_013479.1	Bcl2l10	NP_038507.1	ILMN_2839758	000020328	S	1058	CCTAAAGCTCAGAGCAATGAGGAATGCAATAGGAAACTGGAAGGAATCCC	9	+	75199305-75199354	9qD	Mus musculus Bcl2-like 10 (Bcl2l10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO];  [goid 8625] [evidence ISO]		C85687; AU023065; Diva; Boo; AA420380	C85687; AU023065; Diva; Boo; AA420380
Mus musculus	Riken	ILMN_207120	ILMN_207120	E130308A19RIK	ri|E130308A19|PX00675M18|AK087509|2716					AK087509	E130308A19Rik		ILMN_1224022	001050372	S	2375	TGAAAACTGTGAGAACTTCACCTTCGTCTCCTTCACTCAGGTCTCCAGGC										
Mus musculus	MEEBO	ILMN_186545	ILMN_186545	TPMT	scl022017.1_28				7949153	NM_016785	Tpmt		ILMN_1226726	002710020	S	1	AGAGGTAGATGCTTTGGAAGAAAGGCATAAAGCCTGGGGTCTTGACTACC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + a thiopurine = S-adenosyl-L-homocysteine + a thiopurine S-methylether [goid 8119] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + a thiopurine = S-adenosyl-L-homocysteine + a thiopurine S-methylether [goid 8119] [evidence ISS]		
Mus musculus	RefSeq	ILMN_197999	ILMN_226346	LOC231368	XR_002491.1	XR_002491.1		231368	94376420	XR_002491.1	LOC231368		ILMN_1242465	002360722	S	555	GCAGATTGGGTACCGGATTGTTGCCTCGGTGCCGCACTCCATCATCTATA				5qE1	PREDICTED: Mus musculus similar to 60S acidic ribosomal protein P0 (L10E) (LOC231368), mRNA.					
Mus musculus	RefSeq	ILMN_218616	ILMN_225895	ABL2	NM_009595.2	NM_009595.2		11352	116875855	NM_009595.2	Abl2	NP_033725.2	ILMN_2698137	006520044	S	1697	TTCCATACCTGCCTCGGTTACCGCTGCTTCCTTCCAAGACGAGGACCCTG	1	+	158570615-158570664	1qG3-qH1	Mus musculus v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene) (Abl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]	Abll; Arg	Abll; Arg
Mus musculus	MEEBO	ILMN_189648	ILMN_189648	6330418B08RIK	scl15891.1.1_267						6330418B08Rik		ILMN_2463137	007610093	S	3	GCCCTTTGCAGAGTCAGAATAGTGATTTTTGGATCTGAGCTTCCTAAGAG										
Mus musculus	MEEBO	ILMN_188130	ILMN_188130	SCL0004020.1_31	scl0004020.1_31	AK081191.1			26099743	AK081191.1	scl0004020.1_31		ILMN_2450031	000580274	S	16	GGCATGCACCGATGGCATTTCCTGGCCGTTTGTGCTGCTCATTATGCCCC										
Mus musculus	RefSeq	ILMN_204888	ILMN_227983	MAST4	XM_896995.2	XM_896995.2		328329	94395614	XM_896995.2	Mast4	XP_902088.1	ILMN_1242355	006550152	S	3328	GCTGCAACAGAGCAGAGATTAAAAACGGCTGAGAAACTGCCCCCAGTATG	13	-	104190837-104190886	13qD1	PREDICTED: Mus musculus microtubule associated serine/threonine kinase family member 4, transcript variant 3 (Mast4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199921	ILMN_199921	LOC384065	XM_357398.1	XM_357398.1			38078987	XM_357398.1	LOC384065		ILMN_1244347	005360528	S	33	GGCACCGTTGATGGTGGCCTTTGCCATGACTTACCTCGATTGGTCACATT										
Mus musculus	RefSeq	ILMN_217881	ILMN_217881	NUDT1	NM_008637.1	NM_008637.1		17766	6678949	NM_008637.1	Nudt1	NP_032663.1	ILMN_2880623	006940458	S	781	TGGTGGAACTGAGTCACTGGGGGTCGGAGAATGGAGGATGGGCCTTGCTT	5	+	140813931-140813980	5qG2	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 1 (Nudt1), mRNA.		The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of dGTP, guanosine triphosphate [goid 6203] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 8-oxo-7,8-dihydroguanine triphosphate = 8-oxo-7,8-dihydroguanine phosphate + diphosphate [goid 8413] [evidence IDA]	Mth1	Mth1
Mus musculus	RefSeq	ILMN_198561	ILMN_198561	LOC213280	XM_142475.3	XM_142475.3			38086169	XM_142475.3	LOC213280		ILMN_1250049	007560408	S	1152	GCTGCGTGACTCGGTTCTCCTACTTCTCCATCCACGGCCACAGGCAACTT										
Mus musculus	RefSeq	ILMN_228891	ILMN_228891	AKAP6	NM_198111.2	NM_198111.2		238161	116517310	NM_198111.2	Akap6	NP_932779.2	ILMN_3005211	006510259	S	7191	CGTGGGCCTCCCGATATGGATGTGTGCATTGCTCCTCTTAGGTGATCGTC	12	+	54248930-54248979	12qC1	Mus musculus A kinase (PRKA) anchor protein 6 (Akap6), mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISO]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISO]	Akapbeta; AI482140; Akapalpha; MGC73457; PRKA	Akapbeta; AI482140; Akapalpha; MGC73457; PRKA
Mus musculus	MEEBO	ILMN_184973	ILMN_184973	2010205O06RIK	scl070270.2_38						2010205O06Rik		ILMN_1242356	004060377	S	20	TTTAATGCCTGTACCACCTGTTTCTGGACAGTTCTCTTGGAGGAGCGAAG										
Mus musculus	Riken	ILMN_206420	ILMN_206420	C030038O19RIK	ri|C230022O12|PX00174K07|AK082202|3465					AK082202	C030038O19Rik		ILMN_2579942	004250070	S	3090	CCTGGTGGGTTAATGACTGTGACGTAGGAGCACTGCTGTGGGATTCTAGG										
Mus musculus	RefSeq	ILMN_224271	ILMN_236930	DYNC1I2	NM_010064.3	NM_010064.3		13427	145966714	NM_010064.3	Dync1i2	NP_034194.1	ILMN_1231578	002750504	S	1888	CAGCTACCCGAATCCCTGCCTAGCCTGAAAAGCGGCTGTAGCCTTAGCAA				2qC2	Mus musculus dynein cytoplasmic 1 intermediate chain 2 (Dync1i2), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	Dncic2; 3110079H08Rik; AW554389	Dncic2; 3110079H08Rik; AW554389
Mus musculus	RefSeq	ILMN_221024	ILMN_221024	SERPINA3C	NM_008458.2	NM_008458.2		16625	118130776	NM_008458.2	Serpina3c	NP_032484.1	ILMN_2730054	001470746	S	681	CAAGGGACTCATCTCAGACCTGGATACGGATACACTGATGGTGCTGGTGA	12	-	105389668-105389717	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 3C (Serpina3c), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Klkbp; MGC144822; Kalbp; spi2; 1A1	Klkbp; MGC144822; Kalbp; spi2; 1A1
Mus musculus	MEEBO	ILMN_195997	ILMN_195997	C130023A14RIK	scl48950.1_589						C130023A14Rik		ILMN_1242271	006290386	S	5	AGGGGGGCTGAAGCTCAAGTTTCCTTGCCATTTTCACATGCAATGCAGCC										
Mus musculus	RefSeq	ILMN_196334	ILMN_196334	6330416L07RIK	NM_176962.3	NM_176962.3		319615	141802178	NM_176962.3	6330416L07Rik	NP_795936.1	ILMN_2650339	003460148	S	659	GTAAATATCCAAAAGAAGTCTTGTAAATGTAATGATCGTGGCAAAGATAT	17	-	22476952-22477001	17qA3.3	Mus musculus RIKEN cDNA 6330416L07 gene (6330416L07Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC117948	MGC117948
Mus musculus	RefSeq	ILMN_196334	ILMN_196334	6330416L07RIK	NM_176962.3	NM_176962.3		319615	141802178	NM_176962.3	6330416L07Rik	NP_795936.1	ILMN_2645989	004180402	S	2320	GGTGGATAATACACTTCTCAAAATAGATAGTGACACCAATAGCATTCTGT	17	-	22475207-22475256	17qA3.3	Mus musculus RIKEN cDNA 6330416L07 gene (6330416L07Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC117948	MGC117948
Mus musculus	Riken	ILMN_202595	ILMN_202595	CAMK2D	ri|8030469K03|PX00103H23|AK020214|995					AK020214	Camk2d		ILMN_2550803	003850025	S	763	TTCCTCTGGATGCCTCTGAAATAGAAAGGATAACCTAGTTAGAAGAGAAG						Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]		
Mus musculus	RefSeq	ILMN_222075	ILMN_222075	2510049J12RIK	XM_132808.3	XM_132808.3		70291	94378035	XM_132808.3	2510049J12Rik	XP_132808.1	ILMN_1216056	001110452	S	669	TCTTCAGGGCCATCCAAGAGAGCGGCTTCCACGTGACTGACCATCCCGAC	6	-	115535385-115535434	6qE3	PREDICTED: Mus musculus RIKEN cDNA 2510049J12 gene, transcript variant 1 (2510049J12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217246	ILMN_217246	1700028K03RIK	NM_182745.1	NM_182745.1		76421	33286439	NM_182745.1	1700028K03Rik	NP_877422.1	ILMN_2680815	000050601	S	503	CGCTCTTGACCTTATGTGCACTATAGCCAAGACTACGTCCAAACCACACA	5	+	107975267-107975298:107977136-107977153	5qE5	Mus musculus RIKEN cDNA 1700028K03 gene (1700028K03Rik), mRNA.				MGC117884	MGC117884
Mus musculus	RefSeq	ILMN_217246	ILMN_217246	1700028K03RIK	NM_182745.1	NM_182745.1		76421	33286439	NM_182745.1	1700028K03Rik	NP_877422.1	ILMN_2725531	001780537	S	726	TCCAAATGTAGATTTAAGGGCGTCTGTATTTAAAATAATATGTATACAAT	5	+	107977327-107977376	5qE5	Mus musculus RIKEN cDNA 1700028K03 gene (1700028K03Rik), mRNA.				MGC117884	MGC117884
Mus musculus	MEEBO	ILMN_215191	ILMN_215191	BC024659	scl0108934.2_122				51767667	XM_488673	BC024659		ILMN_2767644	007100402	S	1696	GCTAATCTGAGAAGTGATGTGGAGGGGGGGACTGAGGTTACAGTTAGAGC										
Mus musculus	RefSeq	ILMN_188208	ILMN_228021	HISPPD1	NM_173760.3	NM_173760.3		227399	34328376	NM_173760.3	Hisppd1	NP_776121.2	ILMN_1227412	000290612	S	4584	GGTAGTAAGCTGTAGCTTCAAGCTTATGTTTAGAAGTACTGGACCCTTAT	1	-	99603044-99603093	1qD	Mus musculus histidine acid phosphatase domain containing 1 (Hisppd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]; Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol pentakisphosphate = ADP + bis(diphospho)-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown) [goid 33857] [evidence IEA]	mKIAA0433; D330021B20; AW555814	mKIAA0433; D330021B20; AW555814
Mus musculus	RefSeq	ILMN_207495	ILMN_207495	9130017C17RIK	XM_146427.1	XM_146427.1			20887976	XM_146427.1	9130017C17Rik		ILMN_2587856	005570544	I	125	AACTGGAGGGTTTGTGTTCTGTGAGGGAGGGCACTTCAGAATACAGATTC										
Mus musculus	RefSeq	ILMN_215260	ILMN_215260	DDX26B	NM_172779.3	NM_172779.3		236790	146198717	NM_172779.3	Ddx26b	NP_766367.1	ILMN_2692041	004900376	S	1551	CCAAATCTGAAGTGGCGACAGGCTTTTGACAGCTACTTAAAAACTCTGCC				XqA5	Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B (Ddx26b), mRNA.				D130066O12; 6330505F04Rik; 4930535D10Rik	D130066O12; 6330505F04Rik; 4930535D10Rik
Mus musculus	Riken	ILMN_203954	ILMN_203954	NPC1	ri|A430089E03|PX00138H15|AK040367|3800					AK040367	Npc1		ILMN_1232258	003610474	S	3657	GGAGAAATGGCTACAGTTAAGAGAGCTGCTTTTCCAGAGGACCCGGGTTC						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IEA]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence IMP]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IMP]	Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_193029	ILMN_236584	ZH2C2	NM_026250.2	NM_026250.2		252876	144922603	NM_026250.2	Zh2c2	NP_080526.2	ILMN_2707273	001940025	S	1871	CAGACAAAATACGTTGTTAGAAAATAAATTCTCGTGGAGAAGTCTCACCT	1	+	99689378-99689427	1qD	Mus musculus zinc finger, H2C2 domain containing (Zh2c2), mRNA.				4930429M06Rik; MGC29171; Gin-1; 8430411H10Rik	4930429M06Rik; MGC29171; Gin-1; 8430411H10Rik
Mus musculus	RefSeq	ILMN_209152	ILMN_209152	RXRB	NM_011306.3	NM_011306.3		20182	118130198	NM_011306.3	Rxrb	NP_035436.1	ILMN_2593038	004150753	S	2491	TGGGCTGCATGGTTTTTGCCCTGGACCTCTTTTGGGGGTTCCCTCCCATC	17	+	34173600-34173649	17qB1	Mus musculus retinoid X receptor beta (Rxrb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The expansion of a cardiac muscle cell population by cell division [goid 60038] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]	Nr2b2; AL023085; RCoR-1; H-2RIIBP; Rub	Nr2b2; AL023085; RCoR-1; H-2RIIBP; Rub
Mus musculus	RefSeq	ILMN_209152	ILMN_209152	RXRB	NM_011306.3	NM_011306.3		20182	118130198	NM_011306.3	Rxrb	NP_035436.1	ILMN_1245492	002940189	S	1505	GGTGTACGCCTCACTGGAGACCTATTGCAAGCAGAAGTACCCTGAGCAGC	17	+	34170977-34171026	17qB1	Mus musculus retinoid X receptor beta (Rxrb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The expansion of a cardiac muscle cell population by cell division [goid 60038] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]	Nr2b2; AL023085; RCoR-1; H-2RIIBP; Rub	Nr2b2; AL023085; RCoR-1; H-2RIIBP; Rub
Mus musculus	Riken	ILMN_201728	ILMN_201728	2010002A02RIK	ri|2010002A02|ZX00043F23|AK008025|970					AK008025	2010002A02Rik		ILMN_2544111	001820609	S	604	TGGCTTCAAATTCACAGGAGTTCCCCAGTTTCTGCCTCCTTAGAGCTGGG										
Mus musculus	RefSeq	ILMN_195835	ILMN_195835	TSGA13	NM_054073.2	NM_054073.2		116732	141803085	NM_054073.2	Tsga13	NP_473414.1	ILMN_1225140	004610477	S	929	CCCCTGACATTTTCAAAGCTCCTAGAAGAGAAGCCTACAAGAAGTGTGCC	6	-	30847143-30847192	6qA3.3	Mus musculus testis specific gene A13 (Tsga13), mRNA.				1700023D02Rik; Vme1	1700023D02Rik; Vme1
Mus musculus	RefSeq	ILMN_185820	ILMN_185820	ZC3H7A	NM_145931.1	NM_145931.1		106205	22122350	NM_145931.1	Zc3h7a	NP_666043.1	ILMN_2430275	000520189	S	3129	CTCCTGAGCAGCAACCCACAGTAGATAGGAAAAAGGCTGTTTGACAGGCC	16	-	11137227-11137276	16qA1	Mus musculus zinc finger CCCH type containing 7 A (Zc3h7a), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI447294; HSPC055; Zc3hdc7; A430104C18Rik; Zc3h7; AW556219	AI447294; HSPC055; Zc3hdc7; A430104C18Rik; Zc3h7; AW556219
Mus musculus	RefSeq	ILMN_185820	ILMN_185820	ZC3H7A	NM_145931.1	NM_145931.1		106205	22122350	NM_145931.1	Zc3h7a	NP_666043.1	ILMN_2920708	002690114	S	3318	CAGTGAGTGTAATGCACAGTGGGATCGGAGTACATGATGGATGAAATTCC	16	-	11137038-11137087	16qA1	Mus musculus zinc finger CCCH type containing 7 A (Zc3h7a), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI447294; HSPC055; Zc3hdc7; A430104C18Rik; Zc3h7; AW556219	AI447294; HSPC055; Zc3hdc7; A430104C18Rik; Zc3h7; AW556219
Mus musculus	RefSeq	ILMN_222916	ILMN_222916	DRD3	NM_007877.1	NM_007877.1		13490	6681220	NM_007877.1	Drd3	NP_031903.1	ILMN_1229899	001710240	S	1163	GGCTGCCCTTCTTCTTGACTCACGTTCTTAATACCCACTGTCAGGCATGC	16	+	43822774-43822823	16qB4	Mus musculus dopamine receptor 3 (Drd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of dopamine receptor protein signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 60161] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of dopamine receptor protein signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 60160] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IGI]; The process by which the renin-angiotensin system controls the rate of fluid intake and output into the blood [goid 2016] [evidence IMP]; The process by which the renin-angiotensin system controls the rate of fluid intake and output into the blood [goid 2016] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte differentiation [goid 48715] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence IMP]; Involuntary movement caused by the application of a stimulus to an organism and a subsequent movement. The signal processing of this movement takes place in the spinal cord [goid 50883] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours [goid 32922] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids [goid 19216] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IGI]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant [goid 42220] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence IEA]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D3 receptors [goid 1592] [evidence IDA]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D3 receptors [goid 1592] [evidence IDA]	D3R	D3R
Mus musculus	RefSeq	ILMN_192005	ILMN_192005	V1RG11	NM_134233.1	NM_134233.1		171267	21717782	NM_134233.1	V1rg11	NP_598994.1	ILMN_1220897	004280132	S	657	CTATAGGCATAAGAGTCAGCTACAGTACATTCACAGTGCCCACCATCCCC	7	-	12947407-12947456	7qA1	Mus musculus vomeronasal 1 receptor, G11 (V1rg11), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_200301	ILMN_200301	LOC386179	XM_359105.1	XM_359105.1			38081260	XM_359105.1	LOC386179		ILMN_2538281	000150491	S	739	GGCATATATCCAGAAGATGCCCTAACTGGTAAGAAGGACACATGCTCCAC										
Mus musculus	RefSeq	ILMN_211507	ILMN_211507	CROCC	NM_172122.1	NM_172122.1		230872	26006472	NM_172122.1	Crocc	NP_742120.1	ILMN_2616522	005870110	S	6242	TGCTACAACCTGTACTACCCCGGGCCTCTCCTGGAAGAGCCTCTTGATGG	4	-	140572781-140572830	4qD3	Mus musculus ciliary rootlet coiled-coil, rootletin (Crocc), mRNA.	A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IPI]	KIAA0445	KIAA0445
Mus musculus	RefSeq	ILMN_196997	ILMN_196997	LOC381291	XM_358546.1	XM_358546.1			38073319	XM_358546.1	LOC381291		ILMN_1218905	006290687	S	551	CTGGACACAGGACATGAAGACATCAGTGGTATTGACGGAGAAGCTCCCGC										
Mus musculus	RefSeq	ILMN_217005	ILMN_217005	NOTCH2	NM_010928.2	NM_010928.2		18129	134288852	NM_010928.2	Notch2	NP_035058.2	ILMN_2678002	002070315	S	6911	CCCAGCAGACTGGATGAACCGTGTGGAGATGAACGAGACCCAGTACAGTG	3	+	97950695-97950744	3qF2.2	Mus musculus Notch gene homolog 2 (Drosophila) (Notch2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IC ]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	N2; AI853703	N2; AI853703
Mus musculus	MEEBO	ILMN_223337	ILMN_223337	SCN1A	scl020265.1_263	NM_018733.1			9055327	NM_018733.1	Scn1a		ILMN_2762701	002450280	S	2540	ATTACGGAGAAAACTGACCTGACAATGTCCACAGCAGCTTGTCCGCCCTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Portion of the axon proximal to the neuronal cell body, at the level of the axon hillock. The action potentials that propagate along the axon are generated at the level of this initial segment [goid 43194] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Specialised type of cell-cell junction in cardiac muscle, which mediates mechanical and electrochemical integration between the individual cardiomyocytes. Consist of three different kinds of substructures: adherens junctions, desmosomes and gap junctions [goid 14704] [evidence IDA]; An axon part that is a gap in the myelin where voltage-gated sodium channels cluster and saltatory conduction is executed [goid 33268] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IMP]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; A neurological process that causes the sequential depolarization of a neuron's cell membrane along an axon [goid 19227] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IMP]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [evidence IMP]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence IMP]		
Mus musculus	MEEBO	ILMN_186087	ILMN_186087	SPEER4E	scl0360201.1_330						Speer4e		ILMN_2432516	001770528	S	8	TTTTAAGACCTATTTTTAAAAATTCTATTTCTTATGAATAAAAATTGATT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_205265	ILMN_205265	E330025B05RIK	ri|E330025B05|PX00212E20|AK054434|923					AK054434	E330025B05Rik		ILMN_2571241	004040246	S	820	GTCGACTAAGGCAATCCGAGTTCTAATCCTCATCTTGAAGGCCATCTGGG										
Mus musculus	RefSeq	ILMN_202797	ILMN_230077	TMED7	XM_128959.5	XM_128959.5		66676	94404395	XM_128959.5	Tmed7	XP_128959.3	ILMN_1234851	005670292	S	4014	GAGCCTGGATCCTTACCAAAACTTCCCGGGCACTCAGACTACGCGTGTGC	18	-	46715193-46715242		PREDICTED: Mus musculus transmembrane emp24 protein transport domain containing 7, transcript variant 1 (Tmed7), mRNA.					
Mus musculus	MEEBO	ILMN_187045	ILMN_187045	ZFP276	scl15331.1.1_254				10048419	NM_020497	Zfp276		ILMN_1222031	001770349	S	17	GATCTGGACCAAAGGTAGTTAGTCATCAGGAGACATGCCCAAATGCGCTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223196	ILMN_223196	RHOX11	NM_198598.2	NM_198598.2		194738	91206457	NM_198598.2	Rhox11	NP_941000.1	ILMN_1232695	003840370	S	433	CCTCGGAAAGCATACAGATTTACACCTGGACAGCTGTGGGAACTGCAAGC	X	-	35437834-35437883	XqA3.3	Mus musculus reproductive homeobox 11 (Rhox11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC049711; Gm39; MGC58663	BC049711; Gm39; MGC58663
Mus musculus	RefSeq	ILMN_212794	ILMN_212794	FBXL12	NM_013911.2	NM_013911.2		30843	57164954	NM_013911.2	Fbxl12	NP_038939.2	ILMN_3070975	002690437	I	503	TGCGACAGCTGGACCATGGCGACTCTGTTTGACCTCCCAGACTTGGTGCT	9	-	20446698-20446733:20446734-20446747	9qA3	Mus musculus F-box and leucine-rich repeat protein 12 (Fbxl12), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IPI]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IPI]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fbl12; 3110048D16Rik	Fbl12; 3110048D16Rik
Mus musculus	RefSeq	ILMN_212794	ILMN_212794	FBXL12	NM_013911.2	NM_013911.2		30843	57164954	NM_013911.2	Fbxl12	NP_038939.2	ILMN_1224697	006450497	S	608	TGTCACCGCTGGAAGAGGCTAGTGGATGACCGGTGGCTATGGCGACACGT	9	-	20446486-20446535	9qA3	Mus musculus F-box and leucine-rich repeat protein 12 (Fbxl12), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IPI]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IPI]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fbl12; 3110048D16Rik	Fbl12; 3110048D16Rik
Mus musculus	RefSeq	ILMN_212794	ILMN_212794	FBXL12	NM_013911.2	NM_013911.2		30843	57164954	NM_013911.2	Fbxl12	NP_038939.2	ILMN_2734549	004260647	S	1919	TTCTACATACATGGTTGAGAGGCATAGAGGGCAGGGGCAAGGGAGCATGC	9	-	20442350-20442399	9qA3	Mus musculus F-box and leucine-rich repeat protein 12 (Fbxl12), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IPI]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IPI]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fbl12; 3110048D16Rik	Fbl12; 3110048D16Rik
Mus musculus	RefSeq	ILMN_212794	ILMN_212794	FBXL12	NM_013911.2	NM_013911.2		30843	57164954	NM_013911.2	Fbxl12	NP_038939.2	ILMN_3149680	004150440	A	1863	GGGCTCATTTTCAAGTGGAGGTGTGTGGAGTTCAGGGCTCCGAGGTTGGC	9	-	20442406-20442455	9qA3	Mus musculus F-box and leucine-rich repeat protein 12 (Fbxl12), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IPI]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IPI]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fbl12; 3110048D16Rik	Fbl12; 3110048D16Rik
Mus musculus	RefSeq	ILMN_224057	ILMN_230029	LOC670044	XM_978692.1	XM_978692.1		670044	94387313	XM_978692.1	LOC670044	XP_983786.1	ILMN_2773835	006060082	S	1737	CAGCTTCGCCAAGGGCTGGGGACCCTGCTACTCGCGACAGTTCATCACCT					PREDICTED: Mus musculus similar to Mothers against decapentaplegic homolog 6 (SMAD 6) (Mothers against DPP homolog 6) (Smad6) (Mad homolog 7) (LOC670044), mRNA.					
Mus musculus	RefSeq	ILMN_186120	ILMN_246890	RTN4	NM_024226.3	NM_024226.3		68585	142374254	NM_024226.3	Rtn4	NP_077188.1	ILMN_2732907	000110113	S	96	TTGTACTGCGTCAGCTTGCTCCACACCCCAAAGACATCAGGTGACTCCAG	11	+	29618665-29618714	11qA3.3	Mus musculus reticulon 4 (Rtn4), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISS]	Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence ISO]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	AA960376; mKIAA0886; mKIAA4153; KIAA4153; ASY; NSP-CL; 1110020G17Rik; C130026I10Rik; NOGO; AA409940; AA407876	AA960376; mKIAA0886; mKIAA4153; KIAA4153; ASY; NSP-CL; 1110020G17Rik; C130026I10Rik; NOGO; AA409940; AA407876
Mus musculus	RefSeq	ILMN_200598	ILMN_200598	LOC383385	XM_357023.1	XM_357023.1			38084026	XM_357023.1	LOC383385		ILMN_2539321	006250451	S	803	GGTGTATTGTGGACCCTACAGCTCCCTCTGGTGGCCAGTTGCTAGGTGCA										
Mus musculus	RefSeq	ILMN_197816	ILMN_238745	LOC619973	XM_884359.3	XM_884359.3		619973	149252418	XM_884359.3	LOC619973	XP_889452.2	ILMN_1226760	003890725	S	619	ACAGTGTCCTTGATGACTGTGCTCATGCCCAAGTTTCCCCAGCTCCACGG	4	-	57426613-57426662	4qB3	PREDICTED: Mus musculus similar to LRRGT00183 (LOC619973), mRNA.					
Mus musculus	RefSeq	ILMN_218799	ILMN_245313	2300005B03RIK	NM_001081961.1	NM_001081961.1		69462	126517475	NM_001081961.1	2300005B03Rik	NP_001075430.1	ILMN_2700364	006270288	S	254	GTCCTCATGTATCCATCGCCTGCTGCCAGTCCAATCTCTGCAACAGGGAC	15	-	74573429-74573478	15qD3	Mus musculus RIKEN cDNA 2300005B03 gene (2300005B03Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			SLURP-2	SLURP-2
Mus musculus	RefSeq	ILMN_224181	ILMN_249889	GLRA3	NM_080438.2	NM_080438.2		110304	120300935	NM_080438.2	Glra3	NP_536686.2	ILMN_2776103	004590040	S	1375	CCGAGCCTGCTTTCCGCTAGCATTCCTGATTTTTAACATTTTCTACTGGG	8	+	58604050-58604099	8qB2	Mus musculus glycine receptor, alpha 3 subunit (Glra3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]		
Mus musculus	MEEBO	ILMN_209843	ILMN_209843	4931432E15RIK	scl0070991.1_322	NM_027639.1			13386243	NM_027639.1	4931432E15Rik		ILMN_1241686	004880010	S	1790	TGTACCCCAAATTGCTCATCTCCTGATCCCTTCCTACCCAGGATTCTGCC										
Mus musculus	MEEBO	ILMN_196311	ILMN_196311	MYBBP1A	scl41311.25_261				31982723	NM_016776	Mybbp1a		ILMN_1230169	006450086	S	3884	ACTCAGCACAAAGGAGGTCATAAGAAAGTCCCCCCACCCCCAGTCTGCCC						A protein complex which usually consists of three components, e.g. in Xenopus, the importin alpha and beta-subunits and any protein which has a nuclear localization sequence (NLS). The complex acts to import proteins with an NLS into the nucleus through a nuclear pore [goid 42564] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IDA]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]		
Mus musculus	MEEBO	ILMN_196311	ILMN_196311	MYBBP1A	scl41311.25_261				31982723	NM_016776	Mybbp1a		ILMN_1251458	001400050	S	20	TTATTTATTCATTTACAAGAGGAATATATATTTGGCTTCTCTCTTAAGAC						A protein complex which usually consists of three components, e.g. in Xenopus, the importin alpha and beta-subunits and any protein which has a nuclear localization sequence (NLS). The complex acts to import proteins with an NLS into the nucleus through a nuclear pore [goid 42564] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IDA]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]		
Mus musculus	MEEBO	ILMN_195024	ILMN_195024	2310002B06RIK	scl053951.10_10				31791044	NM_181649	2310002B06Rik		ILMN_2511867	001410288	S	3	TATCTTCGAATTGCCCAGGACCGACCTCTGCGGATCACGACTGAGATTGT										
Mus musculus	RefSeq	ILMN_200736	ILMN_200736	LOC381840	XM_355853.1	XM_355853.1			38085712	XM_355853.1	LOC381840		ILMN_1250830	003420402	S	472	GGAAGTAGAAAGATGCCTTCCTCAGTGTGCAGTGCTGATTGTAGTCCTGG										
Mus musculus	Riken	ILMN_202289	ILMN_202289	4932433F15RIK	ri|4932433F15|PX00018B16|AK016543|3181					AK016543	4932433F15Rik		ILMN_2548435	001010215	S	3063	TGACCCAAGAGGTGGAGGGACTCTAGGGCTACCTGCTGAGATGGTGGTTG										
Mus musculus	RefSeq	ILMN_196432	ILMN_258096	GALNTL2	NM_030166.3	NM_030166.3		78754	153792802	NM_030166.3	Galntl2	NP_084442.1	ILMN_1253278	000450470	S	2104	CAGAACTGCACGGAGGAAGGCCCCGCTATCCATCAGCAGCACTGGGACTT				14qB	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2 (Galntl2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	mpp-GalNAc-T15; 4631401E18Rik	mpp-GalNAc-T15; 4631401E18Rik
Mus musculus	RefSeq	ILMN_215157	ILMN_229613	PCSK5	XM_987372.2	XM_987372.2		18552	149270616	XM_987372.2	Pcsk5	XP_992466.2	ILMN_1225746	007400685	S	6438	CGAAGGCATTTTCCCCGAGGGTATGTCAAGGGTATTAAATGCAGGAATCT				19qB	PREDICTED: Mus musculus proprotein convertase subtilisin/kexin type 5 (Pcsk5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract [goid 30323] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [evidence IDA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IDA]; The chemical reactions and pathways resulting in the formation of cytokines, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 42089] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; Any process involved in the assembly, maturation, egress, and release of progeny virions [goid 19067] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	MEEBO	ILMN_220450	ILMN_220450	CNTN3	scl28580.21.1_28	NM_008779.1			6679206	NM_008779.1	Cntn3		ILMN_2722192	004010463	S	3117	GGCCACCACAGATGGAGGGGATGGCACCAGTAGTGAGCAGATCAGGATTC						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224107	ILMN_233605	LOC671453	XR_003429.1	XR_003429.1		671453	94418266	XR_003429.1	LOC671453		ILMN_2774896	007560021	S	199	TCGAGGTCTTCATTTACAGCTCTCAAAACATCAAGGTTCGGGCTAAATGG					PREDICTED: Mus musculus hypothetical protein LOC671453 (LOC671453), mRNA.					
Mus musculus	Riken	ILMN_206949	ILMN_206949	D630046A03RIK	ri|D630046A03|PX00197L06|AK085606|2954					AK085606	D630046A03Rik		ILMN_1219191	003610402	S	2605	GGGAAACAGCACTTCTGCTCTTACTCACGTCATCCCCAAGTGGAGAGAGC										
Mus musculus	RefSeq	ILMN_240896	ILMN_240896	SERINC4	NM_001025371.1	NM_001025371.1		574418	70778957	NM_001025371.1	Serinc4	NP_001020542.1	ILMN_2795365	000770687	S	1112	CTGTCCAGCCGTCCCCCAGAGACAATAACCTTTCAAGGACAGAATCACAC	2	-	121279319-121279344:121279445-121279468	2qE5	Mus musculus serine incorporator 4 (Serinc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]			
Mus musculus	RefSeq	ILMN_186986	ILMN_240896	SERINC4	NM_001025371.1	NM_001025371.1		574418	70778957	NM_001025371.1	Serinc4	NP_001020542.1	ILMN_1241503	002260717	S	2447	GTTCTTAGAGGACTCCTCTGCCATATAACTGGAGTGCTTTTCCGGTTGCA	2	-	121276950-121276999	2qE5	Mus musculus serine incorporator 4 (Serinc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]			
Mus musculus	RefSeq	ILMN_260997	ILMN_260997	MND1	NM_029797.1	NM_029797.1		76915	37591184	NM_029797.1	Mnd1	NP_084073.1	ILMN_2859440	007100008	S	354	GAGAAAGCAAGAGTTGGCCGGCAAGAGACGGAAGAACGAGCCATGCTTGC	3	-	84190955-84190976:84202354-84202381	3qF1	Mus musculus meiotic nuclear divisions 1 homolog (S. cerevisiae) (Mnd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI591601; Gaj; 2610034E18Rik	AI591601; Gaj; 2610034E18Rik
Mus musculus	MEEBO	ILMN_213787	ILMN_213787	SGK3	scl000830.1_6	NM_177547.2			31342266	NM_177547.2	Sgk3		ILMN_2665364	005220722	S	1576	AGTAATCAGAAAACAGCCCTATGACAACACTGTGGACTGGTGGTGCCTGG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209694	ILMN_209694	BC048599	NM_175020.3	NM_175020.3		232717	146198660	NM_175020.3	BC048599	NP_778185.1	ILMN_2598300	001070286	S	855	CCCTGGATTGAAGATACCATGAAAAATAACTGAGCTCCCACAACAGGAGG				6qB1	Mus musculus cDNA sequence BC048599 (BC048599), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	1700020H15	1700020H15
Mus musculus	MEEBO	ILMN_210373	ILMN_210373	1700040I03RIK	scl073327.1_204	XM_132652.1			20826350	XM_132652.1	1700040I03Rik		ILMN_2604956	006450008	S	867	GGCTTCTGACTAGAATTTGAAACAAAAGGTGCTGAAGGCAGATGGCCCTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_253820	ILMN_253820	OLFR417	NM_207137.3	NM_207137.3		258238	115529468	NM_207137.3	Olfr417	NP_997020.3	ILMN_2970309	002940630	S	235	ATGCTGGTGGATCTGATAGACAAGGACAGCCGCATTTCAGTCACAGGCTG	1	+	176299284-176299333	1qH3	Mus musculus olfactory receptor 417 (Olfr417), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-11	MOR267-11
Mus musculus	RefSeq	ILMN_227097	ILMN_227097	EG629219	NM_001081325.1	NM_001081325.1		629219	124486756	NM_001081325.1	EG629219	NP_001074794.1	ILMN_2973804	002470102	S	803	AAGTGTTCCAGGACAAAATGGTTGGTTTTCCACCAGGCATGTTCCCATGG	7	-	14807831-14807880	7qA1	Mus musculus predicted gene, EG629219 (EG629219), mRNA.					
Mus musculus	Riken	ILMN_205382	ILMN_205382	D430044G20RIK	ri|D430044G20|PX00195I22|AK052535|3953					AK052535	D430044G20Rik		ILMN_2572136	000510014	S	1824	CATGTCAACCTCTAGAGCCACATTTATGGCAGAGAGATAGAGCTTCTGGG										
Mus musculus	RefSeq	ILMN_238244	ILMN_238244	ATP11C	NM_001037863.1	NM_001037863.1		320940	83745136	NM_001037863.1	Atp11c	NP_001032952.1	ILMN_3152506	005290379	A	3904	GGCATGCAATGGGGATGAGCAGGTTTGGCTAACCAGTGTTTCCTTCCGCC	X	-	57478560-57478609	XqA6	Mus musculus ATPase, class VI, type 11C (Atp11c), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Ig; MGC117487; A330005H02Rik	Ig; MGC117487; A330005H02Rik
Mus musculus	RefSeq	ILMN_238244	ILMN_238244	ATP11C	NM_001037863.1	NM_001037863.1		320940	83745136	NM_001037863.1	Atp11c	NP_001032952.1	ILMN_3073665	001440605	I	3444	TCTGAGCTGTAGAAGGGCATCTGACTCATTATCCGCCAGACCTTCAGTCA	X	-	57482374-57482423	XqA6	Mus musculus ATPase, class VI, type 11C (Atp11c), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Ig; MGC117487; A330005H02Rik	Ig; MGC117487; A330005H02Rik
Mus musculus	RefSeq	ILMN_220012	ILMN_220012	C78409	NM_177615.2	NM_177615.2		216441	31341353	NM_177615.2	C78409	NP_808283.1	ILMN_1257015	004670471	S	3458	CAGGGCTCAGAGGGCAGCTAAGGAAAAACTATGTTGCTGAGGACACTCTA	10	-	126574434-126574483	10qD3	Mus musculus expressed sequence C78409 (C78409), mRNA.				MGC107595; D630010I07	MGC107595; D630010I07
Mus musculus	MEEBO	ILMN_222052	ILMN_222052	D330014H01RIK	scl40034.27.1_30	NM_177617.2			31341367	NM_177617.2	D330014H01Rik		ILMN_2743932	003440746	S	5108	AGTGGCGCTAGCGGAAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGT										
Mus musculus	RefSeq	ILMN_223610	ILMN_223610	GSC	NM_010351.1	NM_010351.1		14836	6754075	NM_010351.1	Gsc	NP_034481.1	ILMN_1232648	004780019	S	1089	GCGTGAGCCTCGTCCCCCACCGTAGTATTTATAGTTAAGTTAACGGTGAC	12	-	105709454-105709503	12qE	Mus musculus goosecoid homeobox (Gsc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 48644] [evidence IMP]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IMP]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197724	ILMN_197724	LOC329706	XM_203164.3	XM_203164.3			38077608	XM_203164.3	LOC329706		ILMN_1253763	003190632	S	767	AGCAGACCTTCAGCCCCTCAGACCCCGAACCCGACTGTGTGGACAGGCTA										
Mus musculus	RefSeq	ILMN_213585	ILMN_313043	LOC100044897	XM_001473280.1	XM_001473280.1		100044897	149265204	XM_001473280.1	LOC100044897	XP_001473330.1	ILMN_1242925	004890110	S	2419	TCCAAGGGCTTTCCCCGACGTTCCCGTGAAGTGCCTTCTTCTGGGGAGAG					PREDICTED: Mus musculus similar to the murine homolog of receptor-like tyrosine phosphatase gamma PTPRG (LOC100044897), mRNA.					
Mus musculus	MEEBO	ILMN_216372	ILMN_216372	0610010F05RIK	scl071675.1_1	XM_203572.3			38091312	XM_203572.3	0610010F05Rik		ILMN_2670313	007650470	S	1609	CTAGGCTTGAAGCACAAGTCAGAGCCTCAGTACCTGTCACTGCCCGGCAG										
Mus musculus	RefSeq	ILMN_197752	ILMN_255260	EG625737	XM_921466.2	XM_921466.2		625737	94399045	XM_921466.2	EG625737	XP_926559.1	ILMN_1248756	007400164	S	221	TACACAAGTGGATGTTCGTGGAAGACTAAAGGGGGCATGGGGTCTCAGGC				15qD3	PREDICTED: Mus musculus predicted gene, EG625737 (EG625737), mRNA.					
Mus musculus	RefSeq	ILMN_196766	ILMN_196766	IFNAB	NM_008336.2	NM_008336.2		15974	113865992	NM_008336.2	Ifnab	NP_032362.2	ILMN_1223579	006520674	S	54	AGCACTTTCCTAATGGTCCTGGCAGTGATGAGCTACTGGTCAACCTGCCC	4	-	88337069-88337118	4qC4	Mus musculus interferon alpha B (Ifnab), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196766	ILMN_196766	IFNAB	NM_008336.2	NM_008336.2		15974	113865992	NM_008336.2	Ifnab	NP_032362.2	ILMN_2770778	000240669	S	349	CCCTACTAGACTCATTCTGCAATGACCTCCACCAGCAACTCAATGACCTG	4	-	88336774-88336823	4qC4	Mus musculus interferon alpha B (Ifnab), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]		
Mus musculus	Riken	ILMN_202735	ILMN_202735	9530077A17RIK	ri|9530077A17|PX00114A21|AK020647|800					AK020647	9530077A17Rik		ILMN_1226396	007510577	S	749	CGGTGGGTTCAAGGCCAACCCGAACTACAAAGTGAGCCCCTGTCTCAGGA										
Mus musculus	Riken	ILMN_203559	ILMN_203559	9330177P18RIK	ri|9330177P18|PX00107C22|AK034324|4024					AK034324	9330177P18Rik		ILMN_1227526	003420709	S	3963	CTCCGGCATTATGTGAAGGCGGTGACCTTTCTTAGGCCCTTTGTGCCATG										
Mus musculus	RefSeq	ILMN_197805	ILMN_197805	LOC329824	XM_285796.2	XM_285796.2			38078328	XM_285796.2	LOC329824		ILMN_1212974	002940133	S	848	TATTGGGGGAAAAGGACCTGAAGAAGAACCTGGGCACTGGCAACATCCCT										
Mus musculus	RefSeq	ILMN_191828	ILMN_331697	FLNB	NM_134080.1	NM_134080.1		286940	145966914	NM_134080.1	Flnb	NP_598841.1	ILMN_2482572	005700093	S	8968	GGATGTGAAAGGCGGAATAGACACGGAGACCGAACTGGAATCAAATGCCG				14qA1	Mus musculus filamin, beta (Flnb), mRNA. XM_904364 XM_990154	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL024016	AL024016
Mus musculus	MEEBO	ILMN_189448	ILMN_189448	ZFP41	scl47817.3_456	NM_011759.1			33563279	NM_011759.1	Zfp41		ILMN_2461345	006220609	S	3	TACCCTTGGTGCTGTGTCAGTGTTGTGCACATTGGACTAGACATTCTGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195848	ILMN_232118	HSPB9	XM_894891.3	XM_894891.3		75482	149262512	XM_894891.3	Hspb9	XP_899984.2	ILMN_1231959	004070138	S	577	CTGAGACTCAGGAGGGGAGGCCCTAGGCACTACAACCTACCCTAATGTAT	11	+	100575819-100575868	11qD	PREDICTED: Mus musculus heat shock protein, alpha-crystallin-related, B9 (Hspb9), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]			
Mus musculus	RefSeq	ILMN_196554	ILMN_232118	HSPB9	XM_894891.3	XM_894891.3		75482	149262512	XM_894891.3	Hspb9	XP_899984.2	ILMN_1237106	005810379	S	306	TACCGCATGGAGCAGAGTGTTCACCGACAAATGCAGCTCCCGCCGACCTT	11	+	100575548-100575597	11qD	PREDICTED: Mus musculus heat shock protein, alpha-crystallin-related, B9 (Hspb9), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]			
Mus musculus	RefSeq	ILMN_218717	ILMN_218717	PLEC1	NM_201387.1	NM_201387.1		18810	41322926	NM_201387.1	Plec1	NP_958789.1	ILMN_2699348	002190300	S	170	CAGGGAGTGCTGCTGGGCTCTCTCAGTGCTGAATCAGCAACTTCTCAGTG	15	-	76038864-76038913	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; PLTN; AA591047; PCN; AU042537	EBS1; PLTN; AA591047; PCN; AU042537
Mus musculus	Riken	ILMN_204289	ILMN_204289	9630029E08RIK	ri|9630029E08|PX00116G17|AK036039|1340					AK036039	9630029E08Rik		ILMN_1219659	007650594	S	1079	TGCAGACCCTCAGAGATAACAGATACCAGCCCAGACTACCATATCCAGCC										
Mus musculus	Riken	ILMN_207061	ILMN_207061	OPHN1	ri|6030495I02|PX00646F23|AK077982|1783					AK077982	Ophn1		ILMN_1218197	006660192	S	1455	TCTAAGAGGCCAGAGAGCCAGATCCCCTGCAACTGGAAGCTGTTGTGAGC						The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]		
Mus musculus	RefSeq	ILMN_198420	ILMN_241130	TMF1	NM_001081111.1	NM_001081111.1		232286	124487428	NM_001081111.1	Tmf1	NP_001074580.1	ILMN_1256951	000650475	S	2997	GCCAGTGGAAGCAACCTTTATGAAGCTGTAAGGATGGGAGCTGGATCGAG	6	-	97108100-97108149	6qD3	Mus musculus TATA element modulatory factor 1 (Tmf1), mRNA.				Gm153; Tmf1`	Gm153; Tmf1`
Mus musculus	Riken	ILMN_206118	ILMN_206118	FMR1	ri|B430216O19|PX00071N24|AK080948|2871					AK080948	Fmr1		ILMN_2577690	004220615	S	2498	GCAAGTGAATTGGACACTCCTTTCTGTTGGACATCCCTTTCTCATCTTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_191176	ILMN_191176	CD70	NM_011617.1	NM_011617.1		21948	6755838	NM_011617.1	Cd70	NP_035747.1	ILMN_2996338	001340524	S	699	CTGCCTCTGCTGCCGTCCCGCAACGCTGATGAGACCTTCTTTGGAGTTCA	17	-	56831423-56831472	17qD	Mus musculus CD70 antigen (Cd70), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	Tnfsf7; Cd27l; CD27LG	Tnfsf7; Cd27l; CD27LG
Mus musculus	Riken	ILMN_203675	ILMN_203675	9530039I19RIK	ri|9530039I19|PX00112P03|AK035426|842					AK035426	9530039I19Rik		ILMN_1254960	005670670	S	622	CGGGTGGTATGCGCCCGGCAGATGGAGTTGTTGGTGCTTAGCTGACAGTA										
Mus musculus	MEEBO	ILMN_223994	ILMN_223994	OLFR1056	scl4338.1.1_1				27544964	NM_147018	Olfr1056		ILMN_1250553	005670044	S	544	CTTCCCTTACTGACCTTGATCTGTTCAGGCACACGTGACATTGAACTTAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222597	ILMN_222597	SLC6A11	NM_172890.3	NM_172890.3		243616	146198773	NM_172890.3	Slc6a11	NP_766478.1	ILMN_2752095	001470463	S	3755	CACTTGACACTCTTAACACTACTCATGGGGCTGGGTAGAGGGAGGCTTGT				6qE3	Mus musculus solute carrier family 6 (neurotransmitter transporter, GABA), member 11 (Slc6a11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + Na+(out) = gamma-aminobutyric acid(in) + Na+(in) [goid 5332] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	Gabt4; GAT4; D930045G19Rik; E130202I16Rik	Gabt4; GAT4; D930045G19Rik; E130202I16Rik
Mus musculus	RefSeq	ILMN_222129	ILMN_222129	ANGPT4	NM_009641.1	NM_009641.1		11602	6753005	NM_009641.1	Angpt4	NP_033771.1	ILMN_2745027	001660242	S	1425	TCATCAGCACTTGCACAAGATCAATGGCATCCGCTGGCACTACTTCCGAG	2	+	151770285-151770334	2qG3	Mus musculus angiopoietin 4 (Angpt4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any vascular endothelial growth factor receptor [goid 5172] [evidence TAS]	MGC156453; Agpt4; Ang3	MGC156453; Agpt4; Ang3
Mus musculus	RefSeq	ILMN_195160	ILMN_195160	CNPY2	NM_019953.1	NM_019953.1		56530	9903606	NM_019953.1	Cnpy2	NP_064337.1	ILMN_1242881	007320301	S	927	GAACACCCCCAGGAGGGGAAGATGGCAGCATTGCCTTTTATATTACGTTT	10	+	127764153-127764202	10qD3	Mus musculus canopy 2 homolog (zebrafish) (Cnpy2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D10Bwg1546e; AW229003; 5330432A10Rik; Zsig9	D10Bwg1546e; AW229003; 5330432A10Rik; Zsig9
Mus musculus	Riken	ILMN_204186	ILMN_204186	RPO1-4	ri|B230311P03|PX00159F16|AK045809|1492					AK045809	Rpo1-4		ILMN_1235695	002650152	S	951	GGCCGTGCTATGAGAGTGCTTACAGGTGCCTACGTTCTCAAATCATTGGC										
Mus musculus	Riken	ILMN_203778	ILMN_203778	A230052B14RIK	ri|A230052B14|PX00128I05|AK038639|897					AK038639	A230052B14Rik		ILMN_1229054	004200053	S	480	CTCCCCTGCTGCCCTCAGACTTCAGGGTCTTGTGGAATGTCAACTCAAGG										
Mus musculus	RefSeq	ILMN_212356	ILMN_212356	CCR1L1	NM_007718.2	NM_007718.2		12770	86262146	NM_007718.2	Ccr1l1	NP_031744.2	ILMN_2625504	005220441	S	916	GGTAAACGGTTCCGGAAGTACCTCTGGCAGTTGTTTCGGAGGCATACAGC	9	-	123892276-123892325	9qF4	Mus musculus chemokine (C-C motif) receptor 1-like 1 (Ccr1l1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	MGC156358; Cmkbr1l1	MGC156358; Cmkbr1l1
Mus musculus	RefSeq	ILMN_214676	ILMN_214676	CLIC3	NM_027085.3	NM_027085.3		69454	146141171	NM_027085.3	Clic3	NP_081361.1	ILMN_2650667	000430491	S	630	GGAACTGTCCTGCGTTCGTCGCTACTTGGACAGTGCGTTGCAGAAGAAGG				2qA3	Mus musculus chloride intracellular channel 3 (Clic3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]	2300003G24Rik	2300003G24Rik
Mus musculus	RefSeq	ILMN_199400	ILMN_199400	OLFR385	NM_147023.1	NM_147023.1		259025	33239299	NM_147023.1	Olfr385	NP_667234.1	ILMN_2672020	005490433	S	588	GCTAACGATATTTATCACGGGAGCATTCATTATTGTCATCCCATTCTTAC	11	-	73402601-73402650	11qB4	Mus musculus olfactory receptor 385 (Olfr385), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-206D6.3; MOR135-3	RP23-206D6.3; MOR135-3
Mus musculus	RefSeq	ILMN_220784	ILMN_320574	SYCE1	XM_001479666.1	XM_001479666.1		74075	149258067	XM_001479666.1	Syce1	XP_001479716.1	ILMN_2726829	006330075	S	1574	GGAAGACACATCACCAGCTCTTAATTCTCACTATAAACCACCTCATTCTT				7qF5	PREDICTED: Mus musculus synaptonemal complex central element protein 1 (Syce1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence ISS]; A structural unit of the synaptonemal complex found between the lateral elements [goid 801] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IC ]; Progression through prophase of meiosis I; divided into several stages [goid 7128] [evidence IC ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221713	ILMN_221713	MRGPRA4	NM_153524.1	NM_153524.1		235854	23943788	NM_153524.1	Mrgpra4	NP_705744.1	ILMN_2781430	001440377	S	1130	CCCCTGGGCTTCTTCTGGTTTCTGGTGCCGTGGATTAACCGTGATTTCAG	7	-	55236487-55236536	7qB4	Mus musculus MAS-related GPR, member A4 (Mrgpra4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgA4	MrgA4
Mus musculus	MEEBO	ILMN_211703	ILMN_211703	PDGFB	scl46949.8_253	NM_011057.2			40538816	NM_011057.2	Pdgfb		ILMN_2618714	003130707	S	2319	CGCTGCACAGGTGTCCCTCTGATCTTTTGCGGTTCTACCCGATGGCTCCT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IGI]; The orderly movement of cells from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate [goid 6929] [evidence IDA]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence ISO]		
Mus musculus	RefSeq	ILMN_210482	ILMN_210482	OLFR599	NM_146731.1	NM_146731.1		258726	22129380	NM_146731.1	Olfr599	NP_666942.1	ILMN_2606043	005420719	S	635	ACATGATATTTGTTTTCATCTCCTACATTTTGATTTTCCGAGCTGTTTTT	7	+	110487204-110487253	7qE3	Mus musculus olfactory receptor 599 (Olfr599), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR23-1	MOR23-1
Mus musculus	MEEBO	ILMN_223346	ILMN_223346	SSTY2	scl0070009.1_191				31980633	NM_023546	Ssty2		ILMN_2762855	004560767	S	1072	TTAAATTGAAAAAAATCACAAAGTACAGAAATGTAAACTTATAGGATTGA										
Mus musculus	MEEBO	ILMN_187829	ILMN_187829	D130003B22RIK	scl49939.4.1_283				51770264	XM_111693	D130003B22Rik		ILMN_1251345	000450477	S	1	GGATGTGGGGAGAAGATCAAGTTGTGTGATTCTGATCGAAGGTTCCGTCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	MEEBO	ILMN_186832	ILMN_186832	WIZ	scl0001727.1_40	NM_212437.1			46909560	NM_212437.1	Wiz		ILMN_1257765	000430201	S	20	GCCACCCATCGGATCAGCAGCTGGTGAGTGCCACGCTGGCCCTGACCTCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186832	ILMN_186832	WIZ	scl0001727.1_40	NM_212437.1			46909560	NM_212437.1	Wiz		ILMN_2587792	002760377	I	2768	AGATGCACCTTTGGGTGGCTCACTGGGTCTGAACACACTCCTAGAAGGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186832	ILMN_186832	WIZ	scl0001727.1_40	NM_212437.1			46909560	NM_212437.1	Wiz		ILMN_1228921	002810681	S	2	GTACTAGCCAGGATGCATATACTCACTCACCCGACACTGCCACCGTGGAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222164	ILMN_222164	FAM134B	NM_025459.2	NM_025459.2		66270	31982729	NM_025459.2	Fam134b	NP_079735.2	ILMN_2745614	000360373	S	1459	CATATATACATACTGTGGTGTCCTAAGTGCTTAGGGGCTGTTTGTAAAGT	15	+	25902042-25902091	15qB1	Mus musculus family with sequence similarity 134, member B (Fam134b), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU015349	AU015349
Mus musculus	RefSeq	ILMN_211667	ILMN_211667	MARCH2	NM_145486.4	NM_145486.4		224703	146149243	NM_145486.4	March2	NP_663461.2	ILMN_2618329	005860653	S	808	AATCAGAAAGTCCGCCTGAAGATTCGGGAAGCAGATGGCTCCGAGGATCC				17qB1	Mus musculus membrane-associated ring finger (C3HC4) 2 (March2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC7259; 9530046H09Rik	MGC7259; 9530046H09Rik
Mus musculus	MEEBO	ILMN_185673	ILMN_185673	WBP5	scl022381.3_136	NM_011712.1			33468950	NM_011712.1	Wbp5		ILMN_2429025	002690259	S	19	AAGAAACTTTTCGGGAGAGGCTGATCCGGTCTCTGCAGGATTTTCAGGAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a WW domain of a protein, a small module composed of 40 amino acids and plays a role in mediating protein-protein interactions via proline-rich regions [goid 50699] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221064	ILMN_221064	TGFBR2	NM_009371.2	NM_009371.2		21813	27363473	NM_009371.2	Tgfbr2	NP_033397.2	ILMN_1242086	004200246	S	1644	GGAGTCGTTCAAGCAGACGGATGTCTACTCCATGGCTCTGGTACTCTGGG	9	-	116014181-116014230	9qF3	Mus musculus transforming growth factor, beta receptor II (Tgfbr2), transcript variant 1, mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of B cell tolerance induction [goid 2663] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation [goid 51138] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction [goid 2666] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tolerance induction to self antigen [goid 2651] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; Any process that initiates the activity of an inactive protein kinase [goid 32147] [evidence IDA]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 4702] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	1110020H15Rik; AU042018; TbetaRII; RIIDN; TbetaR-II; DNIIR	1110020H15Rik; AU042018; TbetaRII; RIIDN; TbetaR-II; DNIIR
Mus musculus	RefSeq	ILMN_221064	ILMN_221064	TGFBR2	NM_009371.2	NM_009371.2		21813	27363473	NM_009371.2	Tgfbr2	NP_033397.2	ILMN_2760979	005960497	S	4338	GGTCCACTAGTGGGATTTCTAGGGTTCAAAAGTGACTTCACTTCCGGGTC	9	-	115997139-115997188	9qF3	Mus musculus transforming growth factor, beta receptor II (Tgfbr2), transcript variant 1, mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of B cell tolerance induction [goid 2663] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation [goid 51138] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction [goid 2666] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tolerance induction to self antigen [goid 2651] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; Any process that initiates the activity of an inactive protein kinase [goid 32147] [evidence IDA]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 4702] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	1110020H15Rik; AU042018; TbetaRII; RIIDN; TbetaR-II; DNIIR	1110020H15Rik; AU042018; TbetaRII; RIIDN; TbetaR-II; DNIIR
Mus musculus	RefSeq	ILMN_221064	ILMN_221064	TGFBR2	NM_009371.2	NM_009371.2		21813	27363473	NM_009371.2	Tgfbr2	NP_033397.2	ILMN_2777917	004730047	S	351	GGAAATGGAAGCCCAGAAAGATGCATCCATCCACCTAAGCTGTAATAGGA	9	-	116067409-116067458	9qF3	Mus musculus transforming growth factor, beta receptor II (Tgfbr2), transcript variant 1, mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of B cell tolerance induction [goid 2663] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation [goid 51138] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction [goid 2666] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tolerance induction to self antigen [goid 2651] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; Any process that initiates the activity of an inactive protein kinase [goid 32147] [evidence IDA]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 4702] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	1110020H15Rik; AU042018; TbetaRII; RIIDN; TbetaR-II; DNIIR	1110020H15Rik; AU042018; TbetaRII; RIIDN; TbetaR-II; DNIIR
Mus musculus	RefSeq	ILMN_229743	ILMN_321023	LOC545703	XR_033003.1	XR_033003.1		545703	149253293	XR_033003.1	LOC545703		ILMN_3161419	003840309	S	801	GAGATGGATACCAACACTTAGGTCTGTTTGCTTGATAGGAGATGAAGAGC	4	+	145231771-145231820	4qE1	PREDICTED: Mus musculus similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a5 (LOC545703), misc RNA.					
Mus musculus	RefSeq	ILMN_212838	ILMN_212838	PAN3	NM_028291.3	NM_028291.3		72587	61744462	NM_028291.3	Pan3	NP_082567.2	ILMN_1224373	006450129	S	4013	CCTGTTATGACAGACACAACACGGAAAGGACAACCCTTGAAATCATGTCG	5	+	148359771-148359820	5qG3	Mus musculus PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae) (Pan3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	A430027N15Rik; MGC99847; 2700050F09Rik; MGC102350; AU014670	A430027N15Rik; MGC99847; 2700050F09Rik; MGC102350; AU014670
Mus musculus	RefSeq	ILMN_190731	ILMN_238181	PROSC	NM_001039078.2	NM_001039078.2		114863	119829189	NM_001039078.2	Prosc	NP_001034167.1	ILMN_2472775	004610019	S	72	ACCTCTCAACATTCCCAAGAGGATGCCCGGAGGACCCGCGACTCACCGAG	8	+	28153098-28153147	8qA2	Mus musculus proline synthetase co-transcribed (Prosc), transcript variant 3, mRNA.				2200002F22Rik; 1700024N20Rik	2200002F22Rik; 1700024N20Rik
Mus musculus	RefSeq	ILMN_238181	ILMN_238181	PROSC	NM_001039078.2	NM_001039078.2		114863	119829189	NM_001039078.2	Prosc	NP_001034167.1	ILMN_3129825	006900671	A	428	CTACAGAACCACTGAAGGTGATGGTCCAGATTAACACCAGCGGAGAGGAC	8	+	28159730-28159779	8qA2	Mus musculus proline synthetase co-transcribed (Prosc), transcript variant 3, mRNA.				2200002F22Rik; 1700024N20Rik	2200002F22Rik; 1700024N20Rik
Mus musculus	RefSeq	ILMN_217551	ILMN_217551	NAIP1	NM_008670.2	NM_008670.2		17940	114431261	NM_008670.2	Naip1	NP_032696.2	ILMN_2684636	007150259	S	4556	GCCCACTATTGAATTCAGTAGCTATATTGCTCAATGCCTTGGCAGTCCTT	13	-	101178480-101178529	13qD1	Mus musculus NLR family, apoptosis inhibitory protein 1 (Naip1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Naip; AV364616; Naip1; Birc1a; D13Lsd1; Naip-rs1	Naip; AV364616; Naip1; Birc1a; D13Lsd1; Naip-rs1
Mus musculus	RefSeq	ILMN_200143	ILMN_242310	UBXD7	XM_619387.4	XM_619387.4		224111	149267331	XM_619387.4	Ubxd7	XP_619387.3	ILMN_2537738	006770746	S	462	TCGTGCTCCAATTCCTCAAAAGCAAGAAATATTGGTGGAGCCAGAGCCTT	16	+	32360103-32360152	16qB3	PREDICTED: Mus musculus UBX domain containing 7 (Ubxd7), mRNA.					
Mus musculus	RefSeq	ILMN_197939	ILMN_242310	UBXD7	XM_619387.4	XM_619387.4		224111	149267331	XM_619387.4	Ubxd7	XP_619387.3	ILMN_2529900	000150427	S	2436	GAATATTGTGTCTGGGCTAGGAAGGTGCTTGCTGTTTTTGCCTGCACAGC	16	+	32385750-32385799	16qB3	PREDICTED: Mus musculus UBX domain containing 7 (Ubxd7), mRNA.					
Mus musculus	RefSeq	ILMN_221786	ILMN_221786	EFHC1	XM_129694.8	XM_129694.8		71877	149233628	XM_129694.8	Efhc1	XP_129694.7	ILMN_1251924	005810129	S	1938	GGACAGAGAGACGTTCTTTAAAATCTGTGAAACTCTTAATGTCCCGGTCG	1	+	20979614-20979663	1qA4	PREDICTED: Mus musculus EF-hand domain (C-terminal) containing 1, transcript variant 1 (Efhc1), mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]		
Mus musculus	RefSeq	ILMN_186994	ILMN_244683	ZIC3	NM_009575.2	NM_009575.2		22773	117414177	NM_009575.2	Zic3	NP_033601.2	ILMN_2440242	005260546	S	3238	GGATAGCACACCTCTGAAATGGCAATGAGCAAGGCCAGTTGAACAGTGCT	X	+	55289010-55289059	XqA6	Mus musculus zinc finger protein of the cerebellum 3 (Zic3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Bn	Bn
Mus musculus	RefSeq	ILMN_200680	ILMN_200680	LOC383443	XM_357061.1	XM_357061.1			38085108	XM_357061.1	LOC383443		ILMN_1227866	004590707	S	619	GCAGATCCGGACTTTAGCACTTGCTTTCTGAAGATCTCATGCTCCCAGAG										
Mus musculus	RefSeq	ILMN_219654	ILMN_329081	LOC100043986	XR_031250.1	XR_031250.1		100043986	149262769	XR_031250.1	LOC100043986		ILMN_1228783	002850209	S	720	TCTGAGACTTCTGTTCCAGGCGTCCCTTTTGCCAGCGCCCTGGTTGGGAA	11	-	115209335-115209384		PREDICTED: Mus musculus hypothetical protein LOC100043986 (LOC100043986), misc RNA.					
Mus musculus	RefSeq	ILMN_210237	ILMN_210237	AURKAIP1	NM_025338.3	NM_025338.3		66077	146134896	NM_025338.3	Aurkaip1	NP_079614.1	ILMN_2603581	005820639	S	699	CCCGAAGATCTACCTGAAGAACAAATAATCTGGGTTCCTGTCCCTCTGGC				4qE2	Mus musculus aurora kinase A interacting protein 1 (Aurkaip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45862] [evidence ISA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610033H09Rik; Akip; Aip	0610033H09Rik; Akip; Aip
Mus musculus	RefSeq	ILMN_215262	ILMN_327937	LOC100044180	XM_001471623.1	XM_001471623.1		100044180	149267149	XM_001471623.1	LOC100044180	XP_001471673.1	ILMN_2657343	002940398	S	435	CACCTCCATTCAGAAGGAAGAGGATGATACCTCCAATAACATAGAAGGGG					PREDICTED: Mus musculus hypothetical protein LOC100044180 (LOC100044180), mRNA.					
Mus musculus	Riken	ILMN_201819	ILMN_201819	TAF15	ri|2610111C21|ZX00061G02|AK011843|880					AK011843	Taf15		ILMN_2544827	001820288	S	730	CATTTTCTCTCTATTAGTGTTTTCCTTATTTTATTCTGCCATTTAAGAGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]			
Mus musculus	RefSeq	ILMN_214213	ILMN_214213	PKHD1L1	NM_138674.2	NM_138674.2		192190	29135338	NM_138674.2	Pkhd1l1	NP_619615.2	ILMN_1215879	005700577	S	12360	TACTTTGAAGGCTATCCTAAAGGACTCCAATAACAACCAAGTTGGTGGCC	15	+	44426465-44426514	15qB3.2	Mus musculus polycystic kidney and hepatic disease 1-like 1 (Pkhd1l1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			PKHDL1; AB055648	PKHDL1; AB055648
Mus musculus	RefSeq	ILMN_214213	ILMN_214213	PKHD1L1	NM_138674.2	NM_138674.2		192190	29135338	NM_138674.2	Pkhd1l1	NP_619615.2	ILMN_1234267	000630400	S	11308	CTGGAAAGCCTGGATTCTGACACAGAGACACGAAGACTATCCCCAGTGGC	15	+	44413777-44413826	15qB3.2	Mus musculus polycystic kidney and hepatic disease 1-like 1 (Pkhd1l1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			PKHDL1; AB055648	PKHDL1; AB055648
Mus musculus	RefSeq	ILMN_214213	ILMN_214213	PKHD1L1	NM_138674.2	NM_138674.2		192190	29135338	NM_138674.2	Pkhd1l1	NP_619615.2	ILMN_3000909	001070661	S	12613	CACAGCAAAGCCTCCTCTGTGGGGACACCTGTCCAGACACTGGCTGTCAT	15	+	44428555-44428604	15qB3.2	Mus musculus polycystic kidney and hepatic disease 1-like 1 (Pkhd1l1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			PKHDL1; AB055648	PKHDL1; AB055648
Mus musculus	RefSeq	ILMN_221841	ILMN_221841	GUSB	NM_010368.1	NM_010368.1		110006	6754097	NM_010368.1	Gusb	NP_034498.1	ILMN_2741114	007200333	S	440	AGGGAGGTCACCTCCCCTTTGAGGCTGACATTAGCAAGCTGGTCCAGAGT	5	-	130476331-130476380	5qG1.3	Mus musculus glucuronidase, beta (Gusb), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IDA]	Catalysis of the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate [goid 4566] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	Gus-r; Gur; Gus-u; Gut; asd; AI747421; Gus-t; Gus; Gus-s; g	Gus-r; Gur; Gus-u; Gut; asd; AI747421; Gus-t; Gus; Gus-s; g
Mus musculus	RefSeq	ILMN_221841	ILMN_221841	GUSB	NM_010368.1	NM_010368.1		110006	6754097	NM_010368.1	Gusb	NP_034498.1	ILMN_2855334	006180678	S	2340	CCTCCATTTCCCAGGTGATCCAAATGCCCTTTTGGCCCCTGCGGGTACCA	5	-	130464957-130465006	5qG1.3	Mus musculus glucuronidase, beta (Gusb), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IDA]	Catalysis of the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate [goid 4566] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	Gus-r; Gur; Gus-u; Gut; asd; AI747421; Gus-t; Gus; Gus-s; g	Gus-r; Gur; Gus-u; Gut; asd; AI747421; Gus-t; Gus; Gus-s; g
Mus musculus	RefSeq	ILMN_221841	ILMN_221841	GUSB	NM_010368.1	NM_010368.1		110006	6754097	NM_010368.1	Gusb	NP_034498.1	ILMN_2768026	001190193	S	1417	CTGGACCTCACCCGTCCCGTGACCTTTGTGAGCAACGCCAAATATGATGC	5	-	130471326-130471375	5qG1.3	Mus musculus glucuronidase, beta (Gusb), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IDA]	Catalysis of the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate [goid 4566] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	Gus-r; Gur; Gus-u; Gut; asd; AI747421; Gus-t; Gus; Gus-s; g	Gus-r; Gur; Gus-u; Gut; asd; AI747421; Gus-t; Gus; Gus-s; g
Mus musculus	RefSeq	ILMN_184886	ILMN_184886	VPS33B	NM_178070.3	NM_178070.3		233405	142368211	NM_178070.3	Vps33b	NP_835171.1	ILMN_2422410	006960056	S	1920	CGGCGGAGTTGGCAGGGCCTTGATGAAGTGGTACGGCTGCTAAACTGCAG	7	+	87435163-87435212	7qD3	Mus musculus vacuolar protein sorting 33B (yeast) (Vps33b), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence ISA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]		MGC36556	MGC36556
Mus musculus	RefSeq	ILMN_198839	ILMN_234324	LOC672441	XM_993488.1	XM_993488.1		672441	94418330	XM_993488.1	LOC672441	XP_998582.1	ILMN_2533109	005870048	S	8	ACAGGTTAGAGAAGGGGAAGTCAGGCAATAAGGTTGGGTGGTCTAGTGAC					PREDICTED: Mus musculus similar to protein phosphatase 1, regulatory (inhibitor) subunit 11 (LOC672441), mRNA.					
Mus musculus	Riken	ILMN_203798	ILMN_203798	A230084A06RIK	ri|A230084A06|PX00129P18|AK039002|3466					AK039002	A230084A06Rik		ILMN_1230144	002630349	S	3276	GGCAGACACTGCCTGGTGCATCAAAGGATGACATTGGCTATATTCCTGAG										
Mus musculus	RefSeq	ILMN_212596	ILMN_212596	LRRC39	NM_175413.2	NM_175413.2		109245	141803027	NM_175413.2	Lrrc39	NP_780622.1	ILMN_2746123	002690524	S	2821	CGTAATGCAACATCTGCAAACACAATCATGTGCCCCCACCAAACCGCATC	3	+	116285830-116285879	3qG1	Mus musculus leucine rich repeat containing 39 (Lrrc39), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9430028I06Rik; 2010005E21Rik	9430028I06Rik; 2010005E21Rik
Mus musculus	RefSeq	ILMN_214277	ILMN_212596	LRRC39	NM_175413.2	NM_175413.2		109245	141803027	NM_175413.2	Lrrc39	NP_780622.1	ILMN_1257847	006580243	S	2480	GCTCAAAGGGATGAGAATGAAGAGCACGATGATGGAGGAGACAGACTCAC	3	+	116285489-116285538	3qG1	Mus musculus leucine rich repeat containing 39 (Lrrc39), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9430028I06Rik; 2010005E21Rik	9430028I06Rik; 2010005E21Rik
Mus musculus	RefSeq	ILMN_218098	ILMN_218098	CIDEC	NM_178373.3	NM_178373.3		14311	141802598	NM_178373.3	Cidec	NP_848460.1	ILMN_1222679	001510441	S	1341	GAGGTGTGCGAGAGAGTGTTAGAGGTGGAGATTAACTAAAGCCGGCATGC	6	-	113374941-113374990	6qE3	Mus musculus cell death-inducing DFFA-like effector c (Cidec), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Fsp27; CIDE-3	Fsp27; CIDE-3
Mus musculus	RefSeq	ILMN_220318	ILMN_220318	ELFN2	NM_183141.2	NM_183141.2		207393	62990173	NM_183141.2	Elfn2	NP_898964.2	ILMN_1239570	003170440	S	4637	GAGATAAGAGATTTGTGACTCTTGAGTGAGGAGGATGGTGGGCGAGAGGC	15	-	78500611-78500660	15qE1	Mus musculus leucine rich repeat and fibronectin type III, extracellular 2 (Elfn2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6330514E13; BC094219	6330514E13; BC094219
Mus musculus	RefSeq	ILMN_209435	ILMN_209435	DYNLRB2	NM_029297.1	NM_029297.1		75465	25072206	NM_029297.1	Dynlrb2	NP_083573.1	ILMN_1215019	001300349	S	418	GTTCTCCTGTTTTGACAATGGAACTGCACTACTTGCTTCCCTAAGTCCCC	8	+	119039718-119039767	8qE1	Mus musculus dynein light chain roadblock-type 2 (Dynlrb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	Dncl2b; DNLC2B; 1700009A04Rik	Dncl2b; DNLC2B; 1700009A04Rik
Mus musculus	MEEBO	ILMN_221358	ILMN_221358	RBL2	scl33521.22_145				31560552	NM_011250	Rbl2		ILMN_2774662	003940343	S	2779	CTTCCAGAACATCATGCGTTGTTACAGAACTCAGCCACAGGCCCGGAGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198250	ILMN_229304	CDSN	NM_001008424.2	NM_001008424.2		386463	113374157	NM_001008424.2	Cdsn	NP_001008424.2	ILMN_1253772	000290333	S	2441	CTCTTCTTAGTTCCTGGGTAGTAGACCTCCTGTGCTTCTAGAGGGCCTGG	17	+	35693888-35693937	17qB1	Mus musculus corneodesmosin (Cdsn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence ISO]			AI747712	AI747712
Mus musculus	RefSeq	ILMN_200520	ILMN_229304	CDSN	NM_001008424.2	NM_001008424.2		386463	113374157	NM_001008424.2	Cdsn	NP_001008424.2	ILMN_1235732	006450288	S	2439	GTCTCTTCTTAGTTCCTGGGTAGTAGACCTCCTGTGCTTCTAGAGGGCCT	17	+	35693886-35693935	17qB1	Mus musculus corneodesmosin (Cdsn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence ISO]			AI747712	AI747712
Mus musculus	RefSeq	ILMN_229304	ILMN_229304	CDSN	NM_001008424.2	NM_001008424.2		386463	113374157	NM_001008424.2	Cdsn	NP_001008424.2	ILMN_2796382	000060324	S	2329	CAGGGCAGCCACAGAATCTGGCACAGACTCCCAGTTCCCTCTGGATCCTA	17	+	35693776-35693825	17qB1	Mus musculus corneodesmosin (Cdsn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence ISO]			AI747712	AI747712
Mus musculus	RefSeq	ILMN_215049	ILMN_258062	PDAP1	NM_001033313.3	NM_001033313.3		231887	146198837	NM_001033313.3	Pdap1	NP_001028485.1	ILMN_2654932	001400670	S	530	CGCCCGGCTGGCAATCATCCGGAAACAGCGGGAGGAGGCAGCAAGAAAGA				5qG2	Mus musculus PDGFA associated protein 1 (Pdap1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence ISO]	Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]	PAP1; HASPP28; PAP	PAP1; HASPP28; PAP
Mus musculus	RefSeq	ILMN_213321	ILMN_213321	LANCL1	NM_021295.1	NM_021295.1		14768	21489936	NM_021295.1	Lancl1	NP_067270.1	ILMN_2731792	002140553	S	861	CCGGCTGAAGTTTCCTTCCGGCAATTACCCTCCATGTTTGGATGATACCA	1	-	66940144-66940193	1qC3	Mus musculus LanC (bacterial lantibiotic synthetase component C)-like 1 (Lancl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISO]	p40; AW124738; Gpr69; Gpr69a	p40; AW124738; Gpr69; Gpr69a
Mus musculus	RefSeq	ILMN_213321	ILMN_213321	LANCL1	NM_021295.1	NM_021295.1		14768	21489936	NM_021295.1	Lancl1	NP_067270.1	ILMN_2898832	007570608	S	4039	TCCAGTTCCTCTTGCTTCCTCAAAACCGGTCAGACCAGGTTTCTGGGGGC	1	-	66933906-66933955	1qC3	Mus musculus LanC (bacterial lantibiotic synthetase component C)-like 1 (Lancl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISO]	p40; AW124738; Gpr69; Gpr69a	p40; AW124738; Gpr69; Gpr69a
Mus musculus	RefSeq	ILMN_195042	ILMN_242982	ABI1	NM_001077190.1	NM_001077190.1		11308	116089340	NM_001077190.1	Abi1	NP_001070658.1	ILMN_1234139	001710669	S	2843	CACACAAGTGTGGGTTTCTATGTACTGAGGGTTGCAGATTTATGACAGCA	2	-	22796120-22796169	2qA3	Mus musculus abl-interactor 1 (Abi1), transcript variant 1, mRNA.	The area of a motile cell closest to the direction of movement [goid 31252] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISA]	Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IPI]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [evidence IDA]	NAP1; E3B1; MGC6064; Ssh3bp1	NAP1; E3B1; MGC6064; Ssh3bp1
Mus musculus	RefSeq	ILMN_191704	ILMN_242982	ABI1	NM_001077190.1	NM_001077190.1		11308	116089340	NM_001077190.1	Abi1	NP_001070658.1	ILMN_2481451	006220452	S	3352	CCAGTGTCATTATAGTCCTATAAATTCTAATCGAGGTATCCTGATGGTTA	2	-	22795611-22795660	2qA3	Mus musculus abl-interactor 1 (Abi1), transcript variant 1, mRNA.	The area of a motile cell closest to the direction of movement [goid 31252] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISA]	Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IPI]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [evidence IDA]	NAP1; E3B1; MGC6064; Ssh3bp1	NAP1; E3B1; MGC6064; Ssh3bp1
Mus musculus	RefSeq	ILMN_222897	ILMN_222897	HSBP1	NM_024219.1	NM_024219.1		68196	21311872	NM_024219.1	Hsbp1	NP_077181.1	ILMN_2756369	007510288	S	716	CCAGATGGCCCAGGACATTTAATAGTTGTTTGTGCCGAAGCGTCTCTCAG	8	+	121872380-121872429	8qE1	Mus musculus heat shock factor binding protein 1 (Hsbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Hsp25; 0610007A03Rik; AA408769	Hsp25; 0610007A03Rik; AA408769
Mus musculus	RefSeq	ILMN_220079	ILMN_220079	H2-Q10	NM_010391.4	NM_010391.4		15007	149363687	NM_010391.4	H2-Q10	NP_034521.1	ILMN_2717352	002750324	S	1380	TCCTTGATCTGAGGGTTGATTGACAGGTAAACTAAAGAATTAAGAATACT				17qB1	Mus musculus histocompatibility 2, Q region locus 10 (H2-Q10), mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]		H-2Q10; Qa10; Q10	H-2Q10; Qa10; Q10
Mus musculus	Riken	ILMN_207271	ILMN_207271	G630065C19RIK	ri|G630065C19|PL00013D19|AK090363|2544					AK090363	G630065C19Rik		ILMN_1255899	003440546	S	2268	GTCCAGGTGATCCAACACCCACATACAGACATACATGCAGGTAAAACACC										
Mus musculus	RefSeq	ILMN_209486	ILMN_209486	2410001C21RIK	NM_025542.2	NM_025542.2		66404	141803188	NM_025542.2	2410001C21Rik	NP_079818.1	ILMN_2596259	002900039	S	986	ACTGGGTCACCCACACATCCTACTGCTTCTGAAGCGGGACCGGGCCTTCA	2	+	172294243-172294274:172294275-172294292	2qH3	Mus musculus RIKEN cDNA 2410001C21 gene (2410001C21Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-228E2.5; 1700067C04Rik; AA589417; 5730427M17Rik	RP23-228E2.5; 1700067C04Rik; AA589417; 5730427M17Rik
Mus musculus	MEEBO	ILMN_210807	ILMN_210807	C030002J06RIK	scl000375.1_19	NM_176988.1			28892830	NM_176988.1	C030002J06Rik		ILMN_2609386	005910253	S	2969	TCCTCAACGGAGAGCTATCCCTACAAACATTTTCACCTTGAGTCTGTGGT										
Mus musculus	MEEBO	ILMN_210807	ILMN_210807	C030002J06RIK	scl000375.1_19	NM_176988.1			28892830	NM_176988.1	C030002J06Rik		ILMN_2710620	000620040	S	3087	GCAGTCGGGACACAGGTAGGGACTTACACATAGAACCCTGCTGGTCTGAT										
Mus musculus	RefSeq	ILMN_252079	ILMN_252079	EG381818	NM_001004160.1	NM_001004160.1		381818	51921322	NM_001004160.1	EG381818	NP_001004160.1	ILMN_2912569	002070286	S	848	CTCCTCAGCCTGGAAACCAACAAGGCCCACCCCCACAGGGAGGTCCTCAG	6	-	132404682-132404731	6qG1	Mus musculus predicted gene, EG381818 (EG381818), mRNA.				MGC78233	MGC78233
Mus musculus	RefSeq	ILMN_214855	ILMN_214855	PTPRCAP	NM_016933.3	NM_016933.3		19265	60499027	NM_016933.3	Ptprcap	NP_058629.2	ILMN_2652719	006840360	S	275	TTGTGGGGCCACACCTGCCGCCTGCTCTGGGCCAGCCCTGCAGGCCGCTG	19	+	4156139-4156188	19qA	Mus musculus protein tyrosine phosphatase, receptor type, C polypeptide-associated protein (Ptprcap), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	LSM-1; AI605264; CD-45-AP; LPAP	LSM-1; AI605264; CD-45-AP; LPAP
Mus musculus	RefSeq	ILMN_216085	ILMN_216085	CARD14	NM_130886.3	NM_130886.3		170720	118131044	NM_130886.3	Card14	NP_570956.1	ILMN_2866175	001980408	S	3095	ATGAGAAGACAGCAAAGAAACTCAGGAAGGGCCTGCATCGGCTTGGCAGC	11	+	119205300-119205324:119205851-119205875	11qE2	Mus musculus caspase recruitment domain family, member 14 (Card14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Bimp2; CARMA2	Bimp2; CARMA2
Mus musculus	RefSeq	ILMN_240407	ILMN_240407	AZI2	NM_001048146.1	NM_001048146.1		27215	114326523	NM_001048146.1	Azi2	NP_001041611.1	ILMN_3082580	001780681	A	976	CATGGTTTGGAGCAAGAGCTGGGACTACTGAGGAAGGAGTGCAGTGACCT	9	+	117960540-117960589	9qF3	Mus musculus 5-azacytidine induced gene 2 (Azi2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]		AZ2; AA410145	AZ2; AA410145
Mus musculus	Riken	ILMN_206183	ILMN_206183	AXCAM	ri|E330014A13|PX00212K15|AK087738|1270					AK087738	Axcam		ILMN_2578199	001070731	S	1067	GATGCTAACCAAAACTCAGCTTGCCTGCTTCAGGAACAATAAAGTGCCAG										
Mus musculus	MEEBO	ILMN_186017	ILMN_186017	DIAP3	scl45257.34.1_52				9789930	NM_019670	Diap3		ILMN_1222962	001710022	S	8	CACCCTCAGTACTATGGCTTTGACCTAAAATTACCATTTGGAAATTTCCC							A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187594	ILMN_187594	SCL0003465.1_275	scl0003465.1_275	BC062885.1			38566051	BC062885.1	scl0003465.1_275		ILMN_1242580	000730731	S	10	TTCATTGGCTCGACGACGCCTTCGCCTCAGGGGATGCTCGGTTTTCCCCA										
Mus musculus	RefSeq	ILMN_213820	ILMN_213820	4933434I20RIK	NM_026233.2	NM_026233.2		67555	119964703	NM_026233.2	4933434I20Rik	NP_080509.2	ILMN_2641136	006100497	S	1146	ATTTTACAACTTCTTTAAAAATTACCAGACTCATTTTTGGAAAAAAGGCA	8	+	85903155-85903204	8qC2	Mus musculus RIKEN cDNA 4933434I20 gene (4933434I20Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]		
Mus musculus	MEEBO	ILMN_212245	ILMN_212245	FGA	scl23057.6_324	NM_010196.1			33563251	NM_010196.1	Fga		ILMN_2624363	001440114	S	1783	CGAAGTGCTTACCAGGCACGCTGCACCCGTTTCCTAACCTCCTTTAGTGT						The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]			
Mus musculus	MEEBO	ILMN_185152	ILMN_185152	C87860	scl23088.16_137				19526939	NM_133787	C87860		ILMN_1228859	000630736	S	1	CCCCCCTTTCTGAGATTTAACTGAAGGCCTGTGCCATATTTGGTGTTCTA										
Mus musculus	RefSeq	ILMN_259593	ILMN_259593	BC048546	NM_001001179.1	NM_001001179.1		232400	75677550	NM_001001179.1	BC048546	NP_001001179.1	ILMN_2984219	001770768	S	4196	TGTGAAGATGCTCTCTGGCTTTACTCCTGTCGTCTCATCCACCGAGGAGC	6	-	128508520-128508522:128508870-128508916	6qF3	Mus musculus cDNA sequence BC048546 (BC048546), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 17114] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC58520	MGC58520
Mus musculus	RefSeq	ILMN_221309	ILMN_221309	SFTPB	NM_147779.1	NM_147779.1		20388	22296600	NM_147779.1	Sftpb	NP_680088.1	ILMN_2733762	001090273	S	1114	AGCTAGTCTGTGGCCTTGTCCTCCGATGTTCCACTGAGGATGCCATGGGC	6	+	72259889-72259934:72260629-72260632	6qC1	Mus musculus surfactant associated protein B (Sftpb), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	Any process that modulates the surface tension of a liquid. Surface tension is the property that makes a liquid behave as if it had an elastic skin on its surface at the interface with a gas or an immiscible liquid [goid 50828] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]		SP-B; Sftp3; Sftp-3; AI562151; SF-B	SP-B; Sftp3; Sftp-3; AI562151; SF-B
Mus musculus	RefSeq	ILMN_221309	ILMN_221309	SFTPB	NM_147779.1	NM_147779.1		20388	22296600	NM_147779.1	Sftpb	NP_680088.1	ILMN_2792670	003930152	S	1434	GCTAGCCCTCTGCAGTGCTTCCAAACCCCACACCTCTGAGAACGCGGTCT	6	+	72262896-72262926:72262927-72262941:72263968-72263971	6qC1	Mus musculus surfactant associated protein B (Sftpb), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	Any process that modulates the surface tension of a liquid. Surface tension is the property that makes a liquid behave as if it had an elastic skin on its surface at the interface with a gas or an immiscible liquid [goid 50828] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]		SP-B; Sftp3; Sftp-3; AI562151; SF-B	SP-B; Sftp3; Sftp-3; AI562151; SF-B
Mus musculus	MEEBO	ILMN_191717	ILMN_191717	CD53	scl21690.8_397				19745182	NM_007651	Cd53		ILMN_2481559	001230026	S	17	GTCATGTATTCCTCTTTGTTCAGACTAACACTTAGTGGTGACATTACCAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_216034	ILMN_261959	1700012B07RIK	XM_895288.2	XM_895288.2		69324	94391041	XM_895288.2	1700012B07Rik	XP_900381.1	ILMN_2666550	003140474	S	462	CCGAATATACGACGCGAGCCCCTTTTCTTCTTACCCGTTGCAGGCTGAGA	11	-	109658611-109658660	11qE1	PREDICTED: Mus musculus RIKEN cDNA 1700012B07 gene, transcript variant 2 (1700012B07Rik), mRNA.					
Mus musculus	MEEBO	ILMN_186879	ILMN_186879	3110007P09RIK	scl437.1.1_108				21536263	NM_144906	3110007P09Rik		ILMN_2439292	003890561	S	10	GAGTGATTGACTAACCACAGAAATAAGAATCTTTAAACAAATAGCCAGAT										
Mus musculus	RefSeq	ILMN_184744	ILMN_184744	TRIM3	NM_018880.2	NM_018880.2		55992	83921616	NM_018880.2	Trim3	NP_061368.1	ILMN_1259939	001070551	S	1866	CAAGGGAGTGGCTGTGGACCGAAATGGACATATCATTGTGGTGGATAACA	7	-	112761498-112761547	7qE3	Mus musculus tripartite motif-containing 3 (Trim3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HAC1; Rnf22; BERP1	HAC1; Rnf22; BERP1
Mus musculus	RefSeq	ILMN_184744	ILMN_184744	TRIM3	NM_018880.2	NM_018880.2		55992	83921616	NM_018880.2	Trim3	NP_061368.1	ILMN_3134607	000290086	A	2686	AGTCCCTCTGGTTGTCTCCCTACCACCCTATACACACTGACAGAGACAGC	7	-	112759203-112759252	7qE3	Mus musculus tripartite motif-containing 3 (Trim3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HAC1; Rnf22; BERP1	HAC1; Rnf22; BERP1
Mus musculus	RefSeq	ILMN_184744	ILMN_184744	TRIM3	NM_018880.2	NM_018880.2		55992	83921616	NM_018880.2	Trim3	NP_061368.1	ILMN_3057521	002450368	I	155	CTGGCCCGGAGGTGCAGCCAATGGACAAGCAGTTTCTGGTATGCAGTATC	7	-	112773978-112774027	7qE3	Mus musculus tripartite motif-containing 3 (Trim3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HAC1; Rnf22; BERP1	HAC1; Rnf22; BERP1
Mus musculus	Riken	ILMN_205586	ILMN_205586	B430219N15RIK	ri|B430219N15|PX00071H18|AK046650|1107					AK046650	B430219N15Rik		ILMN_2573694	006770576	S	1026	TGCTGGAATTACAGAAGTGTGCCACCCTCTCACCTCAACCTTGATGGTAC										
Mus musculus	MEEBO	ILMN_196155	ILMN_196155	NNAT	scl20011.1_69				6754863	NM_010923	Nnat		ILMN_1237036	005310382	S	12	GGAAACACACTAGAGAAAAAAATGCCCCTTGCAGGACAAAAACGGAAGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [evidence IMP]			
Mus musculus	RefSeq	ILMN_222558	ILMN_222558	SHBG	NM_011367.1	NM_011367.1		20415	6755505	NM_011367.1	Shbg	NP_035497.1	ILMN_1227933	001170450	S	1082	CTGCTTCCTTCTGCCTGAGTGACTTTTGGGTACAAGGACAGAGACTGGAC	11	-	69428556-69428605	11qB3	Mus musculus sex hormone binding globulin (Shbg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	ABP	ABP
Mus musculus	RefSeq	ILMN_222324	ILMN_222324	OLFR1344	NM_177061.3	NM_177061.3		257882	59676556	NM_177061.3	Olfr1344	NP_796035.2	ILMN_3160374	000770364	S	786	CCTGCGGCCCAAAGCCTCTAGTGATCTTCCTGCTAGACACCATAAACTGG	7	+	6393398-6393447	7qA1	Mus musculus olfactory receptor 1344 (Olfr1344), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	4930415J05Rik; MOR124-1	4930415J05Rik; MOR124-1
Mus musculus	MEEBO	ILMN_212028	ILMN_212028	A930024F17RIK	scl00319640.2_264	NM_176969.2			31342495	NM_176969.2	A930024F17Rik		ILMN_1234987	004120615	S	207	TCTGGCTGGGGAAGTGGTGAGACCTGTTGGGTCAGCAGAGATCAAGGCAG										
Mus musculus	MEEBO	ILMN_212028	ILMN_212028	A930024F17RIK	scl00319640.2_264	NM_176969.2			31342495	NM_176969.2	A930024F17Rik		ILMN_2621911	005290674	S	677	GCCAAGGCATTCGCCTTTGTGTGCGCGCTAATAATTGAGTGCTCTATTCT										
Mus musculus	Riken	ILMN_206387	ILMN_206387	C530047J20RIK	ri|C530047J20|PX00083A12|AK083083|3567					AK083083	C530047J20Rik		ILMN_2579713	006580736	S	3218	CCGGTTGTGTATTGCTTAGAATCTCAGAAGGTCATTATGGCTGTGCTCAG										
Mus musculus	RefSeq	ILMN_214926	ILMN_214926	PROK2	NM_015768.1	NM_015768.1		50501	7656931	NM_015768.1	Prok2	NP_056583.1	ILMN_2653528	001990603	S	905	TACTGTAGCATTGTGGGTTTCTACACTTCCCCGCCTTGCTGGTGGACCCA	6	-	99661851-99661900	6qD3	Mus musculus prokineticin 2 (Prok2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Prok1; PK2; Bv8	Prok1; PK2; Bv8
Mus musculus	RefSeq	ILMN_214926	ILMN_214926	PROK2	NM_015768.1	NM_015768.1		50501	7656931	NM_015768.1	Prok2	NP_056583.1	ILMN_3147259	002710309	A	1029	TGGGAGCGCTCCAGGAACTTTCCTGCACCCATCTGGCCCACTGGCTTTCA	6	-	99661727-99661776	6qD3	Mus musculus prokineticin 2 (Prok2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Prok1; PK2; Bv8	Prok1; PK2; Bv8
Mus musculus	RefSeq	ILMN_210305	ILMN_210305	CLEC4E	NM_019948.2	NM_019948.2		56619	118130533	NM_019948.2	Clec4e	NP_064332.1	ILMN_1216972	001780437	S	1798	TTTAATGAACCCATCCTTACTCTCCTCACTACAACCTGCTCCTATCCACC	6	-	123232478-123232527	6qF2	Mus musculus C-type lectin domain family 4, member e (Clec4e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Clecsf9; C86253; Mincle	Clecsf9; C86253; Mincle
Mus musculus	RefSeq	ILMN_219663	ILMN_313920	LOC100047619	XR_033736.1	XR_033736.1		100047619	149259298	XR_033736.1	LOC100047619		ILMN_2711948	004180437	S	2857	GGTCCATCTGCTGTGCCACCTGAGATAGTGCTGTGGTTATAATGTCTTTT					PREDICTED: Mus musculus similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 (LOC100047619), misc RNA.					
Mus musculus	RefSeq	ILMN_198191	ILMN_259423	LOC240117	XR_002393.1	XR_002393.1		240117	94403906	XR_002393.1	LOC240117		ILMN_1240993	004810671	S	686	GCCAGGAGAGGTGGCAGCCATCAACCCACTTTCTTCTAAGAGTCCATACC				17qC	PREDICTED: Mus musculus hypothetical LOC240117 (LOC240117), mRNA.					
Mus musculus	RefSeq	ILMN_216336	ILMN_216336	STAG1	NM_009282.3	NM_009282.3		20842	118130461	NM_009282.3	Stag1	NP_033308.2	ILMN_2680205	003170725	S	3746	CGGAAGGACAGAACAGGGATGAACTACATGAAAGTAAGAGCTGGAGTCCG	9	+	100853957-100854006	9qE4	Mus musculus stromal antigen 1 (Stag1), mRNA. XM_919981 XM_919990 XM_920002 XM_920014 XM_920028	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		SA-1; AU045003	SA-1; AU045003
Mus musculus	RefSeq	ILMN_216336	ILMN_216336	STAG1	NM_009282.3	NM_009282.3		20842	118130461	NM_009282.3	Stag1	NP_033308.2	ILMN_2714579	001500553	S	5724	CCTGGAATAAGCACAGATAATTCTTTGCCTGACGATCTCCTGTGAACACC	9	+	100858677-100858726	9qE4	Mus musculus stromal antigen 1 (Stag1), mRNA. XM_919981 XM_919990 XM_920002 XM_920014 XM_920028	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		SA-1; AU045003	SA-1; AU045003
Mus musculus	RefSeq	ILMN_216336	ILMN_216336	STAG1	NM_009282.3	NM_009282.3		20842	118130461	NM_009282.3	Stag1	NP_033308.2	ILMN_1233273	006960278	S	4046	TCTGGAACTCTATTATTTAGAGCTAGAGGCCTATATACTGTGATAGCTTG	9	+	100856999-100857048	9qE4	Mus musculus stromal antigen 1 (Stag1), mRNA. XM_919981 XM_919990 XM_920002 XM_920014 XM_920028	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		SA-1; AU045003	SA-1; AU045003
Mus musculus	RefSeq	ILMN_214684	ILMN_214684	ARHGAP9	NM_146011.2	NM_146011.2		216445	90093350	NM_146011.2	Arhgap9	NP_666123.2	ILMN_2650739	005870470	S	1502	GTTGATGCTCAACAACTTTGCCAGCCTCTTCACTTGACCCAGGCGAGGAA	10	+	126766690-126766726:126766727-126766739	10qD3	Mus musculus Rho GTPase activating protein 9 (Arhgap9), mRNA. XM_986639 XM_986675 XM_986715	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence ISO]	MGC37568; AU043488	MGC37568; AU043488
Mus musculus	Riken	ILMN_202993	ILMN_202993	4732456P10RIK	ri|4732456P10|PX00051J14|AK028794|3108					AK028794	4732456P10Rik		ILMN_1258598	005890259	S	2584	GCACAGGAGGAGGATGTACAGAGAGTAGGCCCCTTGCACTATATGTGGTA										
Mus musculus	RefSeq	ILMN_219923	ILMN_219923	PPP4R4	NM_028980.2	NM_028980.2		74521	141803539	NM_028980.2	Ppp4r4	NP_083256.1	ILMN_1246165	002940494	S	3370	GCTCACGCCATGTCAACAGCACCATTTGTACTAATGCTAATAATTCCATC	12	+	104851729-104851778	12qE	Mus musculus protein phosphatase 4, regulatory subunit 4 (Ppp4r4), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	mKIAA1622	mKIAA1622
Mus musculus	RefSeq	ILMN_219923	ILMN_219923	PPP4R4	NM_028980.2	NM_028980.2		74521	141803539	NM_028980.2	Ppp4r4	NP_083256.1	ILMN_2725215	003780491	S	2836	CCTAGGAGGTATGACATGCGATTTACTGTAGGCTCTGAATCCGAGTGCTC	12	+	104851195-104851244	12qE	Mus musculus protein phosphatase 4, regulatory subunit 4 (Ppp4r4), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	mKIAA1622	mKIAA1622
Mus musculus	RefSeq	ILMN_216579	ILMN_317267	ABHD1	NR_003522.1	NR_003522.1		57742	145966725	NR_003522.1	Abhd1		ILMN_2672772	001030253	S	260	ACCCGACACTGTGGTGCTTTGAGGGACGGCTGCAAACCATCTTCCGAGTC				5qB1	Mus musculus abhydrolase domain containing 1 (Abhd1), transcribed RNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	LABH-1; LABH1	LABH-1; LABH1
Mus musculus	RefSeq	ILMN_216579	ILMN_317267	ABHD1	NR_003522.1	NR_003522.1		57742	145966725	NR_003522.1	Abhd1		ILMN_1245678	005340500	S	1245	CTGACCTGGGAGTACTCACTCCTGAAGATGGAAAGAGCTGACAAGAGGAC				5qB1	Mus musculus abhydrolase domain containing 1 (Abhd1), transcribed RNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	LABH-1; LABH1	LABH-1; LABH1
Mus musculus	RefSeq	ILMN_222764	ILMN_215763	FPR3	NM_008042.2	NM_008042.2		14294	124358929	NM_008042.2	Fpr3	NP_032068.2	ILMN_2754393	004280291	S	812	GCTCAAAGAGATGCAGTTTAGTGGTAGTTATAAAATTATTGGCAGGTTGG	17	+	18108233-18108282	17qA3.2	Mus musculus formyl peptide receptor 3 (Fpr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an N-formyl peptide to initiate a change in cell activity [goid 4982] [evidence IEA]; Combining with anaphylatoxin C3a to initiate a change in cell activity [goid 4943] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	LXA4-R; Lxa4r	LXA4-R; Lxa4r
Mus musculus	RefSeq	ILMN_215763	ILMN_215763	FPR3	NM_008042.2	NM_008042.2		14294	124358929	NM_008042.2	Fpr3	NP_032068.2	ILMN_1221662	000510048	S	1143	ACATTATTAATCTGAAAAGTACTTCTCTGTCCCCCGAATTTGGGAAAAAA	17	+	18108564-18108613	17qA3.2	Mus musculus formyl peptide receptor 3 (Fpr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an N-formyl peptide to initiate a change in cell activity [goid 4982] [evidence IEA]; Combining with anaphylatoxin C3a to initiate a change in cell activity [goid 4943] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	LXA4-R; Lxa4r	LXA4-R; Lxa4r
Mus musculus	RefSeq	ILMN_218995	ILMN_218995	CYP2F2	NM_007817.2	NM_007817.2		13107	124001559	NM_007817.2	Cyp2f2	NP_031843.2	ILMN_2702903	006040689	S	1625	CTCTCTCACATGATCTTCCCTTAACCCTGGGCCTGCCACGTATCAGTACT	7	+	27918484-27918533	7qA3	Mus musculus cytochrome P450, family 2, subfamily f, polypeptide 2 (Cyp2f2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving naphthalene, a fused ring bicyclic aromatic hydrocarbon commonly found in crude oil and oil products. Naphthalene is familiar as the compound that gives mothballs their odor; it is used in the manufacture of plastics, dyes, solvents, and other chemicals, as well as being used as an antiseptic and insecticide [goid 18931] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]	Cyp2f	Cyp2f
Mus musculus	RefSeq	ILMN_219413	ILMN_219413	BAG2	NM_145392.2	NM_145392.2		213539	92110031	NM_145392.2	Bag2	NP_663367.1	ILMN_1234419	004830364	S	1405	CTCTATGCATATGCATCTCATACCATGAATTTTTAGGTGTGCGTGGAAGC	1	-	33802689-33802738	1qB	Mus musculus BCL2-associated athanogene 2 (Bag2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Modulates the activity of a molecular chaperone [goid 30188] [evidence ISO]	BC016230; MGC36682; 2610042A13Rik	BC016230; MGC36682; 2610042A13Rik
Mus musculus	RefSeq	ILMN_196009	ILMN_196009	WFDC12	NM_138684.2	NM_138684.2		192200	31981675	NM_138684.2	Wfdc12	NP_619625.1	ILMN_2948296	002490561	S	391	GGATCTCTGGGCACCTTGATCTTGGACTCCCCAACCTCCAGAACTCTGAG	2	-	164015251-164015300	2qH3	Mus musculus WAP four-disulfide core domain 12 (Wfdc12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	WAP2; MGC32134; Swam2	WAP2; MGC32134; Swam2
Mus musculus	RefSeq	ILMN_197953	ILMN_233127	GM1752	XM_925022.2	XM_925022.2		385658	94400414	XM_925022.2	Gm1752	XP_930115.1	ILMN_2529953	005360369	S	1620	ACAATCAGGCAGTGGTTTGAATACCTCACTGCATTTGTTCCAGATTTAGT				16qC1.1	PREDICTED: Mus musculus gene model 1752, (NCBI), transcript variant 5 (Gm1752), mRNA.					
Mus musculus	RefSeq	ILMN_200209	ILMN_233127	GM1752	XM_925022.2	XM_925022.2		385658	94400414	XM_925022.2	Gm1752	XP_930115.1	ILMN_1251375	005810653	S	1233	CCCTTGTGCAACTTTACGGATCTGTCCACCGGAGAGCCCTGGTTCTGCTT				16qC1.1	PREDICTED: Mus musculus gene model 1752, (NCBI), transcript variant 5 (Gm1752), mRNA.					
Mus musculus	RefSeq	ILMN_212317	ILMN_212317	1700112C13RIK	NM_183103.2	NM_183103.2		74306	118130713	NM_183103.2	1700112C13Rik	NP_898926.1	ILMN_2625085	000450187	S	1200	CTTTGACCAAAACCCTTTAGAGCACCTCCCTCATAAAACTTGACTGTTTC	9	+	110758969-110759018	9qF3	Mus musculus RIKEN cDNA 1700112C13 gene (1700112C13Rik), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC107146; Tessp6; 79H19B	MGC107146; Tessp6; 79H19B
Mus musculus	MEEBO	ILMN_185625	ILMN_185625	D230050J18RIK	scl54251.2_572						D230050J18Rik		ILMN_1242269	000940070	S	5	GATGACTGCAAGGTCACTGCTCTACCTGAGAGACTGGTTTATTGGTTCGG										
Mus musculus	RefSeq	ILMN_189151	ILMN_189151	V1RC12	NM_134167.1	NM_134167.1		171185	21699047	NM_134167.1	V1rc12	NP_598928.1	ILMN_1242608	007000491	S	434	CTGGTGCTTATACCAACGTGAGTGAGACCAGCCAGTTGAAGGTGATTAAA	6	-	66629195-66629244	6qC1	Mus musculus vomeronasal 1 receptor, C12 (V1rc12), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_220505	ILMN_220505	MYD116	NM_008654.1	NM_008654.1		17872	6678977	NM_008654.1	Myd116	NP_032680.1	ILMN_2722938	005560328	S	2053	TGGGCACGCCTTAGAAACCCATCTCTTCCACAGTCCGAGCCTCGCTCTTC	7	-	52778462-52778511	7qB4	Mus musculus myeloid differentiation primary response gene 116 (Myd116), mRNA.				9630030H21	9630030H21
Mus musculus	RefSeq	ILMN_201568	ILMN_201568	OLFR767	NM_146318.2	NM_146318.2		258315	154146251	NM_146318.2	Olfr767	NP_666430.2	ILMN_1244795	006020066	S	807	TAAAGGAGTAGCCCTTCTCATTACTTCAGTTGCTCCTTTATTGAATCCCT				10qD3	Mus musculus olfactory receptor 767 (Olfr767), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR115-1; MOR115-4	MOR115-1; MOR115-4
Mus musculus	RefSeq	ILMN_201562	ILMN_201568	OLFR767	NM_146318.2	NM_146318.2		258315	154146251	NM_146318.2	Olfr767	NP_666430.2	ILMN_1234382	002340025	S	212	TCACGAACATCTTCATTCCCAGGGTCCTGGTCAGCATTACAACGGGAAAC				10qD3	Mus musculus olfactory receptor 767 (Olfr767), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR115-1; MOR115-4	MOR115-1; MOR115-4
Mus musculus	RefSeq	ILMN_200137	ILMN_200137	LOC385626	XM_358806.1	XM_358806.1			38080635	XM_358806.1	LOC385626		ILMN_1244702	006200687	S	801	GAATGTCTCTCCAGCCCCTGTCCTCCCCTAGCCGCGTGCAACAATACTCA										
Mus musculus	RefSeq	ILMN_197226	ILMN_197226	LOC227757	XM_140916.2	XM_140916.2			38074675	XM_140916.2	LOC227757		ILMN_2527368	006180370	S	274	AGGATGCTGAGAGTTTACCTTGAAGTGGGTGAACACGCGAACAACTGTGC										
Mus musculus	RefSeq	ILMN_232505	ILMN_232505	DACH1	NM_007826.2	NM_007826.2		13134	84370383	NM_007826.2	Dach1	NP_031852.1	ILMN_3150990	000130671	A	2368	CTCCGGGTCTTAAATGACTCCCTGACCCCTGAGATAGAAGCTGACCGCAG	14	-	98226995-98227029:98227460-98227474	14qE2.1	Mus musculus dachshund 1 (Drosophila) (Dach1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	E130112M23Rik; Dac; AI182278; Dach	E130112M23Rik; Dac; AI182278; Dach
Mus musculus	RefSeq	ILMN_232505	ILMN_232505	DACH1	NM_007826.2	NM_007826.2		13134	84370383	NM_007826.2	Dach1	NP_031852.1	ILMN_3072197	001510026	I	1444	CCAGTTAGCCATCCTCTCAACCATCTGCAGCACAGCCACCTTCCGCCAAA	14	-	98315613-98315662	14qE2.1	Mus musculus dachshund 1 (Drosophila) (Dach1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	E130112M23Rik; Dac; AI182278; Dach	E130112M23Rik; Dac; AI182278; Dach
Mus musculus	RefSeq	ILMN_220312	ILMN_220312	DNMT1	NM_010066.3	NM_010066.3		13433	110347401	NM_010066.3	Dnmt1	NP_034196.3	ILMN_2720451	004480767	S	5174	CTGCCACTGTGCAGGTGGCAAGTGAGACTTGATGTAGTTTTATATGTTGT	9	-	20711687-20711736	9qA3	Mus musculus DNA methyltransferase (cytosine-5) 1 (Dnmt1), mRNA.	A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any mechanism, at the level of transcription or post-transcription, causing long-term gene inactivation [goid 16458] [evidence IDA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IDA]	MommeD2; Met-1; Dnmt; Dnmt1o; Met1; Cxxc9; MTase	MommeD2; Met-1; Dnmt; Dnmt1o; Met1; Cxxc9; MTase
Mus musculus	RefSeq	ILMN_228296	ILMN_228296	LONRF1	NM_001081150.1	NM_001081150.1		244421	124487240	NM_001081150.1	Lonrf1	NP_001074619.1	ILMN_3111383	000160563	A	2128	TGACGGAAGGTCTGTTGTTGACACAGTTGGAGGGAAGCGGTTCAGAGTTC	8	-	37285731-37285780	8qA4	Mus musculus LON peptidase N-terminal domain and ring finger 1 (Lonrf1), mRNA.					
Mus musculus	RefSeq	ILMN_198867	ILMN_228296	LONRF1	NM_001081150.1	NM_001081150.1		244421	124487240	NM_001081150.1	Lonrf1	NP_001074619.1	ILMN_1250309	006900520	S	2652	AGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAGAAATC	8	-	37280346-37280395	8qA4	Mus musculus LON peptidase N-terminal domain and ring finger 1 (Lonrf1), mRNA.					
Mus musculus	RefSeq	ILMN_245039	ILMN_245039	9030205A07RIK	NM_001081017.1	NM_001081017.1		217843	124486611	NM_001081017.1	9030205A07Rik	NP_001074486.1	ILMN_3021555	001170291	I	2046	CTTGTGTCAGTCTAGCATCCTCTGCTACCAGCTCGCCTGTGAACTCCTGG	12	+	104317194-104317243	12qE	Mus musculus RIKEN cDNA 9030205A07 Gene (9030205A07Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			KIAA1409	KIAA1409
Mus musculus	RefSeq	ILMN_196260	ILMN_245039	9030205A07RIK	NM_001081017.1	NM_001081017.1		217843	124486611	NM_001081017.1	9030205A07Rik	NP_001074486.1	ILMN_1222844	003140259	S	7445	GATCCAAGCAGGTTGGGGAACCTTGGTACTGTACTCTCTTTCTAGTTTAG	12	+	104421891-104421940	12qE	Mus musculus RIKEN cDNA 9030205A07 Gene (9030205A07Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			KIAA1409	KIAA1409
Mus musculus	RefSeq	ILMN_200563	ILMN_200563	LOC384357	XM_357596.1	XM_357596.1			38083757	XM_357596.1	LOC384357		ILMN_2539194	004890474	S	64	CGCTTACCCGGAATCCCAGCTTTCAGGCTTCTGGATCAACATCGAGCCTA										
Mus musculus	RefSeq	ILMN_209419	ILMN_209419	RPH3A	NM_011286.2	NM_011286.2		19894	31543602	NM_011286.2	Rph3a	NP_035416.1	ILMN_2595600	007210176	S	3843	CTTCCATGGCTCCCCTGGTTAGTCCCTATAGGTCTGATGCTCCGCCCACT	5	-	121390745-121390794	5qF	Mus musculus rabphilin 3A (Rph3a), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2900002P20Rik; AW108370; AU022689	2900002P20Rik; AW108370; AU022689
Mus musculus	MEEBO	ILMN_218237	ILMN_218237	JMJD3	scl40035.13.1_38	XM_126426.3			38091429	XM_126426.3	Jmjd3		ILMN_2693361	000830646	S	4030	CTGGGCGCGGCGGGGCCACCAGCACACGCCTGGGCTGGACCTAGGTCCCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The modification of histones by removal of methyl groups [goid 16577] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_235034	ILMN_235034	KCNJ4	NM_008427.2	NM_008427.2		16520	46358361	NM_008427.2	Kcnj4	NP_032453.2	ILMN_3005071	007100477	S	2024	CTGTATGGTGTTGGGTTTGGGTACAGAGGGGACTCAGAGGTAGGATGAGT	15	-	79314226-79314275	15qE1	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 4 (Kcnj4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]	Kcnf2; IRK3; MB-IRK3	Kcnf2; IRK3; MB-IRK3
Mus musculus	Riken	ILMN_206157	ILMN_206157	FOLR4	ri|C920001F02|PX00178H07|AK083306|1099					AK083306	Folr4		ILMN_1244595	001090195	S	769	GAGGACAAGCAAACCAGACGATGCACAGGCCATAGAAGCCAACCCTATGG						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence TAS]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200213	ILMN_200213	LOC385957	XM_359013.1	XM_359013.1			38080961	XM_359013.1	LOC385957		ILMN_1225009	006110470	S	729	TGATTTTCCTGTCGGGGACTCCCAGCGAGAGCAAGCGGCTGGTGACCGCC										
Mus musculus	RefSeq	ILMN_216022	ILMN_216022	UBR7	NM_025666.2	NM_025666.2		66622	142354569	NM_025666.2	Ubr7	NP_079942.1	ILMN_2666416	000010270	S	2315	CTTTGTAAAAGTGCGCACAGCCACTCCCTCCTGACGGCTCGGAGGGTCTT	12	+	104014979-104015028	12qE	Mus musculus ubiquitin protein ligase E3 component n-recognin 7 (putative) (Ubr7), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW557761; AA589405	AW557761; AA589405
Mus musculus	RefSeq	ILMN_216022	ILMN_216022	UBR7	NM_025666.2	NM_025666.2		66622	142354569	NM_025666.2	Ubr7	NP_079942.1	ILMN_2730758	001240594	S	2977	GCCAGCCTATGTTGAAGGGCTTGCATAAGAAAGGTTCCCTACTTAACCAG	12	+	104015641-104015690	12qE	Mus musculus ubiquitin protein ligase E3 component n-recognin 7 (putative) (Ubr7), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW557761; AA589405	AW557761; AA589405
Mus musculus	RefSeq	ILMN_193635	ILMN_250171	PDCD6IP	NM_011052.1	NM_011052.1		18571	6755001	NM_011052.1	Pdcd6ip	NP_035182.1	ILMN_1216394	006900215	S	2371	CCTGGCTCTGCTCCCCCGCCACAGGCTCAGGGACCACCATACCCTACCTA	9	-	113565149-113565198	9qF3	Mus musculus programmed cell death 6 interacting protein (Pdcd6ip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI480591; mKIAA1375; C76364; AIP1; Eig2; AW544830; Alix	AI480591; mKIAA1375; C76364; AIP1; Eig2; AW544830; Alix
Mus musculus	MEEBO	ILMN_208876	ILMN_208876	4921509B22RIK	scl45305.11.1_207	XM_127820.1			20876943	XM_127820.1	4921509B22Rik		ILMN_2590386	006420066	S	2062	TGTCTTTTCATGGACCTATATTCAATGACAGGCTAGCAGCTTGAAGCCAT										
Mus musculus	Riken	ILMN_205452	ILMN_205452	4933407H18RIK	ri|4632410K16|PX00012D18|AK028507|3237					AK028507	4933407H18Rik		ILMN_2572663	003460349	S	2761	CTTGAGACGCCTAAGGAAGAGAGCCAGGTCCCCATGCGAGAGTCCTGGTT										
Mus musculus	MEEBO	ILMN_185793	ILMN_185793	2210037E17RIK	scl38169.1.1_127						2210037E17Rik		ILMN_2430051	003400167	S	3	GAACTCCCATGGAATGGGTTCTCTGTTAGCCATGCCCACCTTTATCCTCC										
Mus musculus	MEEBO	ILMN_187329	ILMN_187329	MJ-3000-112_1692	MJ-3000-112_1692						MJ-3000-112_1692		ILMN_2443166	004480010	S	17	CATTAACTCTCCTTGCTACGCTCGAAGATAGGGAGGCGGCGAGACAAACA										
Mus musculus	RefSeq	ILMN_211404	ILMN_211404	FRK	NM_010237.2	NM_010237.2		14302	31542822	NM_010237.2	Frk	NP_034367.2	ILMN_2615513	002120731	S	3281	CTAGGAGGGTAACAGGGACTAACCATTAGCCATTTGGTGATGGCACTTCC	10	+	34329669-34329718	10qB1	Mus musculus fyn-related kinase (Frk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	GTK; BSK/IYK; RAK; C85044; BSK	GTK; BSK/IYK; RAK; C85044; BSK
Mus musculus	RefSeq	ILMN_186433	ILMN_186433	WDR13	NM_026137.3	NM_026137.3		73447	142370534	NM_026137.3	Wdr13	NP_080413.1	ILMN_2507883	003990433	S	1479	GCTTGACGTCAGCTTCAACTGTGACGAGAGTCTGCTGGCCTCCAGTGATG	X	-	7702711-7702760	XqA1.1	Mus musculus WD repeat domain 13 (Wdr13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC158990; DXHXS7467e; 5730411P10Rik; mMg21; 1700060B08Rik; MGC117822; W51679	MGC158990; DXHXS7467e; 5730411P10Rik; mMg21; 1700060B08Rik; MGC117822; W51679
Mus musculus	RefSeq	ILMN_186433	ILMN_186433	WDR13	NM_026137.3	NM_026137.3		73447	142370534	NM_026137.3	Wdr13	NP_080413.1	ILMN_2435521	002690369	S	1310	CCATTGAACAGAGTTCCCACCCTGTACGCAGTATCTTCTGCCCCCTCATG	X	-	7703231-7703280	XqA1.1	Mus musculus WD repeat domain 13 (Wdr13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC158990; DXHXS7467e; 5730411P10Rik; mMg21; 1700060B08Rik; MGC117822; W51679	MGC158990; DXHXS7467e; 5730411P10Rik; mMg21; 1700060B08Rik; MGC117822; W51679
Mus musculus	RefSeq	ILMN_210323	ILMN_249223	OLFR516	NM_146725.1	NM_146725.1		258720	22129386	NM_146725.1	Olfr516	NP_666936.1	ILMN_2604435	000580754	S	284	GTGGCTGTTTTGTGCAGATGTACTTCATTCTTCTCTTTGGTGGAACTGAG	7	-	115989189-115989238	7qE3	Mus musculus olfactory receptor 516 (Olfr516), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR268-2	MOR268-2
Mus musculus	RefSeq	ILMN_249223	ILMN_249223	OLFR516	NM_146725.1	NM_146725.1		258720	22129386	NM_146725.1	Olfr516	NP_666936.1	ILMN_2975511	001400392	S	464	TGACTACTCTGCAGACCACATGGGTGTTTAGCTTCCCCTACTGTGACCAC	7	-	115989009-115989058	7qE3	Mus musculus olfactory receptor 516 (Olfr516), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR268-2	MOR268-2
Mus musculus	RefSeq	ILMN_198801	ILMN_198801	LOC233452	XM_145901.2	XM_145901.2			38087729	XM_145901.2	LOC233452		ILMN_2532972	005490605	S	1551	CACTGTGGCTGCCTCTACTGTCTTGGCCAAAACGATTACTGTAATACTGG										
Mus musculus	RefSeq	ILMN_207005	ILMN_218507	SVOPL	NM_177200.4	NM_177200.4		320590	148368991	NM_177200.4	Svopl	NP_796174.2	ILMN_1250292	000630468	S	1945	CCCTGAGATTGAATGGGGCCAGGAGAAGGTAAGGGTGGAGGATACACTTC				6qB1	Mus musculus SV2 related protein homolog (rat)-like (Svopl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	9430071P14Rik	9430071P14Rik
Mus musculus	RefSeq	ILMN_216780	ILMN_216780	SIGLEC5	NM_145581.1	NM_145581.1		233186	21704167	NM_145581.1	Siglec5	NP_663556.1	ILMN_2675309	006940403	S	2164	TGTTTTGAAGTGTGACTGTGTTGTAGCTACATATATCTCAAATTGAACTC	7	+	50614558-50614607	7qB4	Mus musculus sialic acid binding Ig-like lectin 5 (Siglec5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any monosaccharide. Monosaccharides are the simplest carbohydrates; they are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H[CHOH]nC(=O)[CHOH]mH with three or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides [goid 48029] [evidence IDA]	Siglecf; mSiglec-F; Siglec5	Siglecf; mSiglec-F; Siglec5
Mus musculus	Riken	ILMN_202219	ILMN_202219	EIF3S3	ri|1110008A16|R000014I03|AK003560|385					AK003560	Eif3s3		ILMN_1224316	003440274	S	103	GAGATTCGGCCGTGAAGCAGGTGCAGATTAACACTTACTGCCAGAACATC										
Mus musculus	MEEBO	ILMN_215003	ILMN_215003	1500015L24RIK	scl068994.3_303	NM_183277.1			34304074	NM_183277.1	1500015L24Rik		ILMN_2654393	003830630	S	685	CACTCGAGGTTTTATCAACTTGATCAACAGGTATGTTCATAGTAAACCCG										
Mus musculus	RefSeq	ILMN_219981	ILMN_234526	TMEM89	XM_982264.1	XM_982264.1		69384	94386510	XM_982264.1	Tmem89	XP_987358.1	ILMN_2716043	002190341	S	349	GTGACCTCCAGCTCCGGCAAACACTGGAAAGAGCAGCCCACTGTCTCAGA				9qF2	PREDICTED: Mus musculus transmembrane protein 89 (Tmem89), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211088	ILMN_211088	CHRNB2	NM_009602.3	NM_009602.3		11444	40789302	NM_009602.3	Chrnb2	NP_033732.2	ILMN_2612392	003060154	S	5125	GCTCAGGTGGGAAAAGTTTTGAAGCAGGGAAAGTGCTGAGGACATAGCCG	3	-	89557532-89557581	3qF1	Mus musculus cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal) (Chrnb2), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; The process of communication from a neuron to a smooth muscle in the bladder that contributes to the expulsion of urine from the body [goid 60084] [evidence IGI]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 32226] [evidence IMP]; Any process that modulates the frequency, rate or extent of rapid eye movement (REM) sleep [goid 42320] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IGI]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IC ]; Any process that modulates the frequency, rate or extent of non-rapid eye movement sleep [goid 45188] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IMP]; Any process that modulates the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 32225] [evidence IMP]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process whose specific outcome is the progression of the vestibulocochlear nerve over time, from its formation to the mature structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea [goid 21562] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 45759] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51963] [evidence IMP]; Generation of a long process from a neuron whose cell body resides in the central nervous system. The process carries efferent (outgoing) action potentials from the cell body towards target cells [goid 21955] [evidence IMP]; The progression of the lateral geniculate nucleus over time from its initial formation until its mature state. The lateral geniculate nucleus is the primary processor of visual information received from the retina [goid 21771] [evidence IMP]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the regulated release of dopamine [goid 33603] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IGI]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IGI]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus [goid 1661] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IGI]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant [goid 42220] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IDA];  [goid 4889] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4889] [evidence IGI]	Acrb2; C030030P04Rik; [b]2-nAchR; Acrb-2	Acrb2; C030030P04Rik; [b]2-nAchR; Acrb-2
Mus musculus	RefSeq	ILMN_211088	ILMN_211088	CHRNB2	NM_009602.3	NM_009602.3		11444	40789302	NM_009602.3	Chrnb2	NP_033732.2	ILMN_2865297	006400309	S	4906	GTTAAAAGGTGCATCTGAATGTGTCGTGGTCCCAGCTGCAACTGCCTTCC	3	-	89557751-89557800	3qF1	Mus musculus cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal) (Chrnb2), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; The process of communication from a neuron to a smooth muscle in the bladder that contributes to the expulsion of urine from the body [goid 60084] [evidence IGI]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 32226] [evidence IMP]; Any process that modulates the frequency, rate or extent of rapid eye movement (REM) sleep [goid 42320] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IGI]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IC ]; Any process that modulates the frequency, rate or extent of non-rapid eye movement sleep [goid 45188] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IMP]; Any process that modulates the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 32225] [evidence IMP]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process whose specific outcome is the progression of the vestibulocochlear nerve over time, from its formation to the mature structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea [goid 21562] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 45759] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51963] [evidence IMP]; Generation of a long process from a neuron whose cell body resides in the central nervous system. The process carries efferent (outgoing) action potentials from the cell body towards target cells [goid 21955] [evidence IMP]; The progression of the lateral geniculate nucleus over time from its initial formation until its mature state. The lateral geniculate nucleus is the primary processor of visual information received from the retina [goid 21771] [evidence IMP]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the regulated release of dopamine [goid 33603] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IGI]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IGI]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus [goid 1661] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IGI]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant [goid 42220] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IDA];  [goid 4889] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4889] [evidence IGI]	Acrb2; C030030P04Rik; [b]2-nAchR; Acrb-2	Acrb2; C030030P04Rik; [b]2-nAchR; Acrb-2
Mus musculus	RefSeq	ILMN_211088	ILMN_211088	CHRNB2	NM_009602.3	NM_009602.3		11444	40789302	NM_009602.3	Chrnb2	NP_033732.2	ILMN_2759307	000380181	S	1620	CTCTTCCAGAACTACACTGCCACGACCTTCCTTCACTCTGACCACTCAGC	3	-	89561037-89561086	3qF1	Mus musculus cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal) (Chrnb2), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; The process of communication from a neuron to a smooth muscle in the bladder that contributes to the expulsion of urine from the body [goid 60084] [evidence IGI]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 32226] [evidence IMP]; Any process that modulates the frequency, rate or extent of rapid eye movement (REM) sleep [goid 42320] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IGI]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IC ]; Any process that modulates the frequency, rate or extent of non-rapid eye movement sleep [goid 45188] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IMP]; Any process that modulates the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 32225] [evidence IMP]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process whose specific outcome is the progression of the vestibulocochlear nerve over time, from its formation to the mature structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea [goid 21562] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 45759] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51963] [evidence IMP]; Generation of a long process from a neuron whose cell body resides in the central nervous system. The process carries efferent (outgoing) action potentials from the cell body towards target cells [goid 21955] [evidence IMP]; The progression of the lateral geniculate nucleus over time from its initial formation until its mature state. The lateral geniculate nucleus is the primary processor of visual information received from the retina [goid 21771] [evidence IMP]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the regulated release of dopamine [goid 33603] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IGI]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IGI]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus [goid 1661] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IGI]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant [goid 42220] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IDA];  [goid 4889] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4889] [evidence IGI]	Acrb2; C030030P04Rik; [b]2-nAchR; Acrb-2	Acrb2; C030030P04Rik; [b]2-nAchR; Acrb-2
Mus musculus	RefSeq	ILMN_222344	ILMN_261909	LOC382019	XM_981324.1	XM_981324.1		382019	94385153	XM_981324.1	LOC382019	XP_986418.1	ILMN_2748269	004610452	S	539	AACATATGAAGACTCACAATGAAGAGAAAACTTACAAATATAAGCAAACT					PREDICTED: Mus musculus similar to hypothetical protein FLJ38281 (LOC382019), mRNA.					
Mus musculus	RefSeq	ILMN_259299	ILMN_259299	2410005O16RIK	NM_025476.3	NM_025476.3		66302	31560254	NM_025476.3	2410005O16Rik	NP_079752.3	ILMN_2987015	002450148	S	1286	GATGGAGTTGCTGACTGAGAGGAGCCAGGCCTTTATGATGCTGAGGGCTC	4	+	19533631-19533680	4qA3	Mus musculus RIKEN cDNA 2410005O16 gene (2410005O16Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	6430576D04Rik; AI449062; 5730501K14Rik; 5033415E11Rik	6430576D04Rik; AI449062; 5730501K14Rik; 5033415E11Rik
Mus musculus	RefSeq	ILMN_197400	ILMN_236688	LOC271171	XR_002083.1	XR_002083.1		271171	94396545	XR_002083.1	LOC271171		ILMN_1223394	001440445	S	453	CACAGATAATGTGAAGGACCGGAGCGAGATGGACCTGGCCTGTGAACCTG	14	+	15740406-15740455	14qA2	PREDICTED: Mus musculus similar to Triosephosphate isomerase (TIM) (Triose-phosphate isomerase) (LOC271171), mRNA.					
Mus musculus	RefSeq	ILMN_200705	ILMN_200705	LOC383461	XM_357075.1	XM_357075.1			38085343	XM_357075.1	LOC383461		ILMN_2539716	003940164	S	54	ACAGCTGGATGCTGGGACACTAGAGAACAGGCTTGGTGCTCAGAAGGACC										
Mus musculus	RefSeq	ILMN_208973	ILMN_208973	ARMCX3	NM_027870.1	NM_027870.1		71703	21311832	NM_027870.1	Armcx3	NP_082146.1	ILMN_1234742	004570168	S	2997	GAAAGGTTTGGAAAACGGCAAGTACTGGAGGGCAGCAGCTGATTCATTTG	X	+	131295636-131295685	XqE3	Mus musculus armadillo repeat containing, X-linked 3 (Armcx3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	ALEX3; 1200004E24Rik; AI450003	ALEX3; 1200004E24Rik; AI450003
Mus musculus	RefSeq	ILMN_194603	ILMN_229419	SH3BP5	NM_011894.2	NM_011894.2		24056	109150404	NM_011894.2	Sh3bp5	NP_036024.2	ILMN_1245950	004480722	S	1225	GGTTGAACGAGGAGACAGAGCAGAAGGGGCCGAGAATAAAATGAGTGACA	14	-	32188348-32188387:32188790-32188799	14qB	Mus musculus SH3-domain binding protein 5 (BTK-associated) (Sh3bp5), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence ISO]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence TAS]	AI606498; Sab	AI606498; Sab
Mus musculus	MEEBO	ILMN_212948	ILMN_212948	CLN8	scl026889.3_52	NM_012000.2			31542407	NM_012000.2	Cln8		ILMN_1246305	006100458	S	4387	GCCACACCCCGTGTCAGTAAGATCTCATTCGTTCCACAAAGGGCTGATGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that modulates the size of a cell [goid 8361] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system [goid 50881] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IMP]; The process whereby neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21522] [evidence IMP]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IMP]; The uptake of L-glutamate by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters [goid 51935] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein by individual cells [goid 44257] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor [goid 51348] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]; The uptake of L-glutamate by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters [goid 51935] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, where the change varies according to the age of the cell or organism [goid 1306] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a macromolecule, any large molecule including proteins, nucleic acids and carbohydrates, as carried out by individual cells [goid 44265] [evidence IMP]			
Mus musculus	RefSeq	ILMN_213750	ILMN_213750	CYP2B19	NM_007814.1	NM_007814.1		13090	6681106	NM_007814.1	Cyp2b19	NP_031840.1	ILMN_2846120	003520097	S	2336	TTTTGTCAGCTGTCCCTGCTTCTCAGGTCCCTGTACTGTGCGGGCCACAG	7	+	27557290-27557339	7qA3	Mus musculus cytochrome P450, family 2, subfamily b, polypeptide 19 (Cyp2b19), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212318	ILMN_212318	KLHL38	NM_177755.3	NM_177755.3		268807	142364546	NM_177755.3	Klhl38	NP_808423.1	ILMN_2625094	006480639	S	1853	CCCAGAGACGGACACTTGGACATCCCAGGGACAGCTACCTCACAAACTCT	15	-	58146437-58146486	15qD1	Mus musculus kelch-like 38 (Drosophila) (Klhl38), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_203181	ILMN_203181	A430103M24RIK	ri|A430103M24|PX00064J24|AK040499|3309					AK040499	A430103M24Rik		ILMN_1217642	004060470	S	2959	CAGCTCGTGACGGGGCTATACTGGACTTAAAGGACCATTGCTACATTTCG										
Mus musculus	RefSeq	ILMN_217064	ILMN_217064	ID4	NM_031166.2	NM_031166.2		15904	118130031	NM_031166.2	Id4	NP_112443.1	ILMN_2678714	005870097	S	914	CGACCAGACTGCTAAGTAGAAGAGCAATCGTGAATCCAACCTTAGAGGCT	13	+	48358659-48358708	13qA5	Mus musculus inhibitor of DNA binding 4 (Id4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of astrocyte differentiation [goid 48712] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex [goid 21895] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Idb4	Idb4
Mus musculus	Riken	ILMN_202312	ILMN_202312	4833411B01RIK	ri|4833411B01|PX00028A07|AK014676|1681					AK014676	4833411B01Rik		ILMN_1228391	004220241	S	1440	GCAAAGCGAGGCCCCAGAAACCCACTTAAATGCTGGATGGGCATGGCAGC										
Mus musculus	RefSeq	ILMN_222537	ILMN_222537	ATP6V1G1	NM_024173.1	NM_024173.1		66290	15617196	NM_024173.1	Atp6v1g1	NP_077135.1	ILMN_2928875	001110113	S	13	GATCAGGTGATCCGAGGGGCTTCGGAGGGTGTTTGAGCAGTTGACTTAGG	4	+	63205883-63205932	4qC1	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit G1 (Atp6v1g1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IDA]; A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [evidence IPI]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]	1810024D14Rik; Vma10; AA960677; ATP6J; Atp6g1; VAG1	1810024D14Rik; Vma10; AA960677; ATP6J; Atp6g1; VAG1
Mus musculus	RefSeq	ILMN_198966	ILMN_198966	LOC209706	XM_150249.1	XM_150249.1			20896510	XM_150249.1	LOC209706		ILMN_1257177	002750093	S	490	GGGAGCGCCCACACAGGTGCTGCAGATTGTCCTGAAAAGATGTGAAGAAA										
Mus musculus	Riken	ILMN_201904	ILMN_201904	4933427C01RIK	ri|4933427C01|PX00020L05|AK016943|2005					AK016943	4933427C01Rik		ILMN_1242388	005900148	S	1555	CTAATAGGCTCAGCCACTCCCAACCTGGTGATTAACTTTGCCGGTTTCCT										
Mus musculus	RefSeq	ILMN_189659	ILMN_234026	KIF14	NM_001081258.1	NM_001081258.1		381293	124486926	NM_001081258.1	Kif14	NP_001074727.1	ILMN_2463259	006620711	S	8689	TGGGTTCGGGCTAGGAGAGGTCAACCTGGCCGATATCTGGAGCTCTTGGA	1	+	138428007-138428056	1qE4	Mus musculus kinesin family member 14 (Kif14), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D1Ertd367e; E130203M01	D1Ertd367e; E130203M01
Mus musculus	RefSeq	ILMN_234026	ILMN_234026	KIF14	NM_001081258.1	NM_001081258.1		381293	124486926	NM_001081258.1	Kif14	NP_001074727.1	ILMN_3104989	001690431	A	4609	AGCTGCGGAAATGAACTGCCTCGTGCTGACTGTGAGGAACTGGAGTCTCT	1	+	138423927-138423976	1qE4	Mus musculus kinesin family member 14 (Kif14), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D1Ertd367e; E130203M01	D1Ertd367e; E130203M01
Mus musculus	RefSeq	ILMN_196628	ILMN_234026	KIF14	NM_001081258.1	NM_001081258.1		381293	124486926	NM_001081258.1	Kif14	NP_001074727.1	ILMN_1253184	003390050	S	1207	GCCAGCCAGACAACTGTATATGAGACACTAGCTGCACCACTCCTGGACAG	1	+	138368036-138368085	1qE4	Mus musculus kinesin family member 14 (Kif14), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D1Ertd367e; E130203M01	D1Ertd367e; E130203M01
Mus musculus	RefSeq	ILMN_210739	ILMN_237318	IQWD1	XM_976438.2	XM_976438.2		74106	149245318	XM_976438.2	Iqwd1	XP_981532.2	ILMN_2608666	000870639	S	2724	CTCGGAACACCATCACCGTCCCAGCCTCTTTCATGTTGAGGATGTTGGCG	1	-	167263441-167263490	1qH2.3	PREDICTED: Mus musculus IQ motif and WD repeats 1 (Iqwd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	 [goid 30374] [evidence ISO]		
Mus musculus	RefSeq	ILMN_184500	ILMN_233870	UGT1A10	NM_201641.2	NM_201641.2		394430	145864476	NM_201641.2	Ugt1a10	NP_964003.2	ILMN_2419146	006100739	S	2135	GCTTGTGCCGGAATTTGATGAAAACCAAAGTATGTTCTAAGGCAAGTACA				1qD	Mus musculus UDP glycosyltransferase 1 family, polypeptide A10 (Ugt1a10), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Ugt1a13; MGC107546; A13	Ugt1a13; MGC107546; A13
Mus musculus	RefSeq	ILMN_192592	ILMN_233870	UGT1A10	NM_201641.2	NM_201641.2		394430	145864476	NM_201641.2	Ugt1a10	NP_964003.2	ILMN_1222543	006330372	S	1977	ACGGCTTTCTCCCCTGGATTCTCAGACTGCCGTGGCCTTCTCCAGTGTTA				1qD	Mus musculus UDP glycosyltransferase 1 family, polypeptide A10 (Ugt1a10), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Ugt1a13; MGC107546; A13	Ugt1a13; MGC107546; A13
Mus musculus	RefSeq	ILMN_184500	ILMN_233870	UGT1A10	NM_201641.2	NM_201641.2		394430	145864476	NM_201641.2	Ugt1a10	NP_964003.2	ILMN_2474378	004480181	S	55	TGGACTTTGAATTTACCATGGTTCCTGCAGCCTTTCCCACCTCTCTTCCT				1qD	Mus musculus UDP glycosyltransferase 1 family, polypeptide A10 (Ugt1a10), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Ugt1a13; MGC107546; A13	Ugt1a13; MGC107546; A13
Mus musculus	RefSeq	ILMN_193070	ILMN_233870	UGT1A10	NM_201641.2	NM_201641.2		394430	145864476	NM_201641.2	Ugt1a10	NP_964003.2	ILMN_2493826	002350131	S	1987	CCCCTGGATTCTCAGACTGCCGTGGCCTTCTCCAGTGTTAGTCATTCTTC				1qD	Mus musculus UDP glycosyltransferase 1 family, polypeptide A10 (Ugt1a10), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Ugt1a13; MGC107546; A13	Ugt1a13; MGC107546; A13
Mus musculus	RefSeq	ILMN_184500	ILMN_233870	UGT1A10	NM_201641.2	NM_201641.2		394430	145864476	NM_201641.2	Ugt1a10	NP_964003.2	ILMN_2502317	006350059	S	482	GAAGCAGAGATCTTTTGATGCAGTGTTTCTGGATCCTTTCGATGTATGTG				1qD	Mus musculus UDP glycosyltransferase 1 family, polypeptide A10 (Ugt1a10), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Ugt1a13; MGC107546; A13	Ugt1a13; MGC107546; A13
Mus musculus	MEEBO	ILMN_185316	ILMN_185316	6030408C04RIK	scl43226.3.1_61				51767259	XM_126912	6030408C04Rik		ILMN_2426020	002650603	S	13	TGTTGTAACTTTATAAAAATAGGTATCTACATCTGTCAAATGTGTTTTTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	MEEBO	ILMN_185316	ILMN_185316	6030408C04RIK	scl43226.3.1_61				51767259	XM_126912	6030408C04Rik		ILMN_2637483	000360360	S	5106	TGTTGATAAAACATGGTTACTATTGCATATTTGTTATGCTTCAGGTAATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	RefSeq	ILMN_242566	ILMN_242566	MEP1B	NM_008586.1	NM_008586.1		17288	6678861	NM_008586.1	Mep1b	NP_032612.1	ILMN_2820305	002000224	S	1937	GAGAAGACTGGTGGTACATGGGCAAAAGGTGTGAGAAGAGAGGGTCCACC	18	+	21255800-21255849	18qA2	Mus musculus meprin 1 beta (Mep1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	MGC159330; Mep-1b	MGC159330; Mep-1b
Mus musculus	RefSeq	ILMN_200628	ILMN_200628	LOC381788	XM_355788.1	XM_355788.1			38084545	XM_355788.1	LOC381788		ILMN_2539436	000290687	S	1297	CTAGACGAGGTCATTGTCCTTCCCCCTGGAGAGTGGGACCCAAACATCAG										
Mus musculus	MEEBO	ILMN_224165	ILMN_224165	4933427G17RIK	scl32112.9.4_161				51761908	XM_133717	4933427G17Rik		ILMN_2775861	004830070	S	1780	CATGTCCTCCAGGTTATGCTGTGCTCAAGGGCGCTCTCAGGAACATTCTT										
Mus musculus	RefSeq	ILMN_209739	ILMN_322259	LOC100044538	XR_030742.1	XR_030742.1		100044538	149255479	XR_030742.1	LOC100044538		ILMN_1254241	004180537	S	882	AAAAGTTGGAGGTGTTGCATTCAGATTTTTGTTGGTATTTGGTGTTGGCC					PREDICTED: Mus musculus similar to immunity-associated nucleotide 4 (LOC100044538), misc RNA.					
Mus musculus	RefSeq	ILMN_221754	ILMN_324906	LOC100045391	XM_001474194.1	XM_001474194.1		100045391	149274814	XM_001474194.1	LOC100045391	XP_001474244.1	ILMN_1226071	004260086	S	175	CCAGGGAATAAACTTGAGTACATGGGGTACATAAGCTACAGTGGTAGCAC					PREDICTED: Mus musculus similar to Ig alpha-chain precursor (V139-D-J1) (LOC100045391), mRNA.					
Mus musculus	RefSeq	ILMN_209319	ILMN_209319	MICAL1	NM_138315.1	NM_138315.1		171580	19923870	NM_138315.1	Mical1	NP_612188.1	ILMN_2842605	006270750	S	3062	GTAGCTCTCCAGAACAGCAGAAGAAACTCTGGCTGGATCAGCTGCTACGG	10	+	41206187-41206236	10qB1-qB2	Mus musculus microtubule associated monoxygenase, calponin and LIM domain containing 1 (Mical1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IMP]	Nical; MGC27831; MGC38321; MICAL	Nical; MGC27831; MGC38321; MICAL
Mus musculus	RefSeq	ILMN_209319	ILMN_209319	MICAL1	NM_138315.1	NM_138315.1		171580	19923870	NM_138315.1	Mical1	NP_612188.1	ILMN_1215951	002100747	S	3102	GCTGCTACGGCTCATTCAGAAGAAGAACAGCCTAGTGACTGAAGAGGCCG	10	+	41206227-41206276	10qB1-qB2	Mus musculus microtubule associated monoxygenase, calponin and LIM domain containing 1 (Mical1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IMP]	Nical; MGC27831; MGC38321; MICAL	Nical; MGC27831; MGC38321; MICAL
Mus musculus	RefSeq	ILMN_209319	ILMN_209319	MICAL1	NM_138315.1	NM_138315.1		171580	19923870	NM_138315.1	Mical1	NP_612188.1	ILMN_1225077	001850326	S	3014	AGCTGGAGGCCGAAGGCACGAAGCTGGAGCTGGCCTTGAGGAAAGAGAGT	10	+	41205889-41205927:41206178-41206188	10qB1-qB2	Mus musculus microtubule associated monoxygenase, calponin and LIM domain containing 1 (Mical1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IMP]	Nical; MGC27831; MGC38321; MICAL	Nical; MGC27831; MGC38321; MICAL
Mus musculus	Riken	ILMN_206109	ILMN_206109	B430208C09RIK	ri|B430208C09|PX00071B21|AK080916|3682					AK080916	B430208C09Rik		ILMN_2577617	002140504	S	2928	CCCTAACCGGGTTGCTTGGAAAGAATGCCAGGGAAAGCCATTCTTAAGGC										
Mus musculus	Riken	ILMN_202559	ILMN_202559	3110001O07RIK	ri|3110001O07|ZX00035A16|AK013969|1450					AK013969	3110001O07Rik		ILMN_1212663	006220204	S	730	TCCCAGCTACTTCCTAGCTCAAGCACAGTTCTGCTGCCTTCTGGGCACAG										
Mus musculus	RefSeq	ILMN_217108	ILMN_217108	NEK9	NM_145138.1	NM_145138.1		217718	21553094	NM_145138.1	Nek9	NP_660120.1	ILMN_2900944	005490521	S	5008	CCAGAATTGTGCCTAGGACAACCATAAGATGTTCTCCCCTACCAAACAGC	12	-	86640767-86640816	12qD2	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 9 (Nek9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	C130021H08Rik	C130021H08Rik
Mus musculus	RefSeq	ILMN_217108	ILMN_217108	NEK9	NM_145138.1	NM_145138.1		217718	21553094	NM_145138.1	Nek9	NP_660120.1	ILMN_1218295	004480068	S	4609	GGGGAAAGCCCAAACCTGACGTAAGGTTACAAGTTCTAGGGGTCTGGCAG	12	-	86641166-86641215	12qD2	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 9 (Nek9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	C130021H08Rik	C130021H08Rik
Mus musculus	RefSeq	ILMN_198932	ILMN_198932	LOC245892	XM_147335.2	XM_147335.2			38089843	XM_147335.2	LOC245892		ILMN_1230065	006380730	S	238	GGCAGAAAAACTGAGACGGTCCTGTGTACCTTCCAAGACGGTGCCCTGGT										
Mus musculus	Riken	ILMN_207097	ILMN_207097	E330008F04RIK	ri|E330008F04|PX00211F13|AK087697|1865					AK087697	E330008F04Rik		ILMN_1246197	001170270	S	1699	ACTGGAGCATTGGTGAGATAGCACAGTAGATAAGGCACTTGCAGCCAGGC										
Mus musculus	RefSeq	ILMN_215553	ILMN_321539	1700013N18RIK	NR_003639.1	NR_003639.1		73318	153792712	NR_003639.1	1700013N18Rik		ILMN_2660924	000670424	S	966	GGGTGGTGGGTACACAATACTGCTCAGAAGGGGTAAAGGTCCCCCAATCT				5qF	Mus musculus RIKEN cDNA 1700013N18 gene (1700013N18Rik), non-coding RNA.		The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223449	ILMN_320260	1700122O11RIK	XM_001480119.1	XM_001480119.1		76651	149268728	XM_001480119.1	1700122O11Rik	XP_001480169.1	ILMN_1215484	005080360	S	604	CGCAATGTCAATGTGGCCTCCGGTTATTATCAACCCTCCCTCCAAGAGCT	17	-	48173812-48173861	17qC	PREDICTED: Mus musculus RIKEN cDNA 1700122O11 gene (1700122O11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219274	ILMN_219274	DEDD2	NM_207677.3	NM_207677.3		67379	115299735	NM_207677.3	Dedd2	NP_997560.3	ILMN_1223015	004250204	S	1747	AGGGAAGACGAGGACGAGGGCTGATGGGAAGATGGTTCACAAACTGCGCC	7	-	25987890-25987939	7qA3	Mus musculus death effector domain-containing DNA binding protein 2 (Dedd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLAME-3; 2410050E11Rik	FLAME-3; 2410050E11Rik
Mus musculus	RefSeq	ILMN_222618	ILMN_222618	CAR7	NM_053070.1	NM_053070.1		12354	28269694	NM_053070.1	Car7	NP_444300.1	ILMN_2752362	006100711	S	792	ATGAGAGGATCCATATGGTGGACAACTTCCGGCCACCACAGCCGCTGAAG	8	+	107438726-107438775	8qD3	Mus musculus carbonic anhydrase 7 (Car7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	AV343731	AV343731
Mus musculus	RefSeq	ILMN_224076	ILMN_235788	MC1R	NM_008559.2	NM_008559.2		17199	124339840	NM_008559.2	Mc1r	NP_032585.2	ILMN_2774319	002140519	S	1408	TATCCAGTGGCCTGCATCCTGTGAGACCACAGGTACTCATCCCTTCCTGA	8	+	125932389-125932438	8qE1	Mus musculus melanocortin 1 receptor (Mc1r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with melanocyte stimulating hormone to initiate a change in cell activity [goid 4980] [evidence IEA]; Combining with melanocortin to initiate a change in cell activity [goid 4977] [evidence IEA]	e; Mshra; Tob	e; Mshra; Tob
Mus musculus	Riken	ILMN_202221	ILMN_202221	4833416H08RIK	ri|4833416H08|PX00028I09|AK014708|1167					AK014708	4833416H08Rik		ILMN_1227220	000160022	S	975	AGGAACTGGAGAGTGGGTGTGAGCACTTGTTGCTGTGGCAGAGACTCAGG										
Mus musculus	Riken	ILMN_202679	ILMN_202679	6030458C11RIK	ri|6030458C11|PX00057H12|AK020074|854					AK020074	6030458C11Rik		ILMN_1234196	006400136	S	789	AGGTGTCGCTCAGGAGTGGATCGCTTTCCTAACATGCCTACAGCCCTGTG										
Mus musculus	MEEBO	ILMN_212977	ILMN_212977	SLC35E3	scl37462.1.1_318	XM_125864.1			20865479	XM_125864.1	Slc35e3		ILMN_1252557	000670441	S	1123	GGCAGCACTGTCTTTTTGTTGCCAATGGAACTGAATGTAGTTTTTAATCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_220958	ILMN_220958	UGT2B37	NM_053215.3	NM_053215.3		112417	118131147	NM_053215.3	Ugt2b37	NP_444445.2	ILMN_2729134	005860463	S	1727	CTACCTTGTAAGAAGACATATAAATCTGTGAATACTGATGCATTTTCAAA	5	-	87669619-87669668	5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide B37 (Ugt2b37), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	0610033E06Rik	0610033E06Rik
Mus musculus	RefSeq	ILMN_200591	ILMN_200591	LOC384371	XM_357602.1	XM_357602.1			38083983	XM_357602.1	LOC384371		ILMN_2539299	004610703	S	52	GCTGTGGCCCGACAGGCCCTGATTGTGGGCAGGCACTGGTGCACTCAGTT										
Mus musculus	RefSeq	ILMN_221330	ILMN_311845	LOC100045403	XR_031641.1	XR_031641.1		100045403	149250345	XR_031641.1	LOC100045403		ILMN_2734090	006940209	S	1091	GTGAGCGGGCCCTGTGTATATGACCCAACCTGTGAGTACCAGCCAACTCC					PREDICTED: Mus musculus similar to orthologue of H. sapiens chromosome 21 open reading frame 102 (C20orf102) (LOC100045403), misc RNA.					
Mus musculus	RefSeq	ILMN_210821	ILMN_210821	CENPN	NM_028131.3	NM_028131.3		72155	146141174	NM_028131.3	Cenpn	NP_082407.1	ILMN_1223979	001690360	S	1228	CCGACCAGCTTCTGTGTACAGTCTTGTGTCTTAGAAGCCAATCCTTGGCG				8qE1	Mus musculus centromere protein N (Cenpn), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]			2610510J17Rik; AI426416; AW545024	2610510J17Rik; AI426416; AW545024
Mus musculus	MEEBO	ILMN_189049	ILMN_189049	RBMS1	scl19235.1.573_16				9937971	NM_020296	Rbms1		ILMN_2457905	000940187	S	10	AGTATTTTTTAGTTCTTAAATTTTATTGCTTGTATTTGATGATAGATGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214635	ILMN_214635	DCX	NM_010025.2	NM_010025.2		13193	46575787	NM_010025.2	Dcx	NP_034155.2	ILMN_2931623	003870471	S	8634	CTTGGACTGGAATGTTTGGCAAGGCCCATGTAAACTGGTTAGAGCAGGCC	X	-	140290665-140290714	XqF2	Mus musculus doublecortin (Dcx), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; Long distance growth of a single process [goid 48675] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IGI]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Dbct	Dbct
Mus musculus	RefSeq	ILMN_214635	ILMN_214635	DCX	NM_010025.2	NM_010025.2		13193	46575787	NM_010025.2	Dcx	NP_034155.2	ILMN_1256251	005290176	S	1230	CTGATTCACTTGGCGATTCCATGTGAAAGATGATAGGCTAAATCAAAGCC	X	-	140298069-140298093:140298094-140298118	XqF2	Mus musculus doublecortin (Dcx), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; Long distance growth of a single process [goid 48675] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IGI]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Dbct	Dbct
Mus musculus	RefSeq	ILMN_214635	ILMN_214635	DCX	NM_010025.2	NM_010025.2		13193	46575787	NM_010025.2	Dcx	NP_034155.2	ILMN_1228206	002260136	S	8692	CTCCTGTGACCGTTAATCTCCCCCACCATAATTTGATGAGGGCTGTTTGG	X	-	140290607-140290656	XqF2	Mus musculus doublecortin (Dcx), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; Long distance growth of a single process [goid 48675] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IGI]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Dbct	Dbct
Mus musculus	RefSeq	ILMN_221248	ILMN_221248	RAD17	NM_011233.2	NM_011233.2		19356	113199764	NM_011233.2	Rad17	NP_035363.2	ILMN_1222143	005310189	S	2569	GTTTGAGGAGAAGTCACGGTGTGAAGTGTATGAATGTTGTACTAAATATC	13	-	101387347-101387396	13qD1	Mus musculus RAD17 homolog (S. pombe) (Rad17), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	9430035O09Rik; MmRad24	9430035O09Rik; MmRad24
Mus musculus	RefSeq	ILMN_197466	ILMN_197466	LOC218962	XM_122692.2	XM_122692.2			38076103	XM_122692.2	LOC218962		ILMN_1256741	004640722	S	1413	CAGTGTGGAGCAGCTGGCAAGAAAAGAGCAGCAACAGCAGGAGAAGTATC										
Mus musculus	Riken	ILMN_205297	ILMN_205297	4833440M03RIK	ri|4833440M03|PX00313N15|AK029453|1480					AK029453	4833440M03Rik		ILMN_2571502	004250132	S	849	GAAACGCCTCCTGTAGAGTTTGTGGCAGTTAGAGAGGGTCGAACTTGCAG										
Mus musculus	RefSeq	ILMN_201442	ILMN_236511	LOC547150	XR_001562.1	XR_001562.1		547150	94383059	XR_001562.1	LOC547150		ILMN_2542311	002650279	S	621	GTACACACTGATGGCTCAGGCAGTGGACAGGGACACCAACAAACCACTGG	8	-	19873558-19873607	8qA1.3	PREDICTED: Mus musculus similar to p47 protein (LOC547150), misc RNA.					
Mus musculus	MEEBO	ILMN_216757	ILMN_216757	FUS	scl00233908.1_1058	NM_139149.1			20982844	NM_139149.1	Fus		ILMN_2674979	007000138	S	1075	TCCTATTAAAGTTTCATTTGCTACCCGCCGAGCTGACTTCAATCGGGGTG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210222	ILMN_210222	OLFR1299	NM_146884.2	NM_146884.2		258886	110681703	NM_146884.2	Olfr1299	NP_667095.2	ILMN_2603395	005900348	S	632	CCCATGATTTGGACATTTTAATGAATGCTGACTGTGGGATTGTAGTTGTA	2	+	111504959-111505008	2qE3	Mus musculus olfactory receptor 1299 (Olfr1299), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR248-8	MOR248-8
Mus musculus	RefSeq	ILMN_222969	ILMN_222969	CCDC41	NM_029852.2	NM_029852.2		77048	124430758	NM_029852.2	Ccdc41	NP_084128.2	ILMN_2757445	002360128	S	2494	AGTCTGACGGGTAACGTGTGGCACTGAGACGCCTTCTTCCTGTTTGCCAA				10qC2	Mus musculus coiled-coil domain containing 41 (Ccdc41), mRNA.				5730513H21Rik; 4921537D05Rik; 2600001G24Rik	5730513H21Rik; 4921537D05Rik; 2600001G24Rik
Mus musculus	RefSeq	ILMN_201224	ILMN_201224	ANKDD1A	XM_357954.6	XM_357954.6		384945	149260003	XM_357954.6	Ankdd1a	XP_357954.6	ILMN_1240158	003120360	S	1231	TGGCGACTGGCCTCCCGGTATCTAAGGCCCAATGAGTGGAAGAAACTGGC	9	-	65351228-65351277	9qC	PREDICTED: Mus musculus ankyrin repeat and death domain containing 1A (Ankdd1a), mRNA.					
Mus musculus	RefSeq	ILMN_192016	ILMN_247921	EMCN	NM_016885.1	NM_016885.1		59308	8393724	NM_016885.1	Emcn	NP_058581.1	ILMN_1259365	005270021	S	1139	TGCCGTAGTTGAGTTTAGACTTTCCAGGTTTTCTTAGCCTCGATCCGTGG	3	+	137093815-137093864	3qG3	Mus musculus endomucin (Emcn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Muc14; AI315669; 0610012K22Rik	Muc14; AI315669; 0610012K22Rik
Mus musculus	RefSeq	ILMN_223701	ILMN_223701	RDH16	NM_009040.2	NM_009040.2		19683	142363086	NM_009040.2	Rdh16	NP_033066.1	ILMN_1219440	007560762	S	3021	CCTCACCCAGTTTTTTGTTGTTGTTCTTAGAAGCCAGTGTACTCAGAGGG	10	+	127252709-127252758	10qD3	Mus musculus retinol dehydrogenase 16 (Rdh16), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	CRAD1; MGC107668; Rdh6; CRAD	CRAD1; MGC107668; Rdh6; CRAD
Mus musculus	RefSeq	ILMN_217201	ILMN_217201	ENC1	NM_007930.3	NM_007930.3		13803	40254358	NM_007930.3	Enc1	NP_031956.3	ILMN_1237886	006290689	S	4247	CTAGGCATTTGGGCTTGCTACTTGACCATTCTCGCCCTGTGAAATGTCCC	13	+	98022564-98022613	13qD1	Mus musculus ectodermal-neural cortex 1 (Enc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PIG10; Nrpb	PIG10; Nrpb
Mus musculus	RefSeq	ILMN_187222	ILMN_230358	2410127L17RIK	XM_001000423.1	XM_001000423.1		67383	94406128	XM_001000423.1	2410127L17Rik	XP_001000423.1	ILMN_1237814	004730463	S	460	GCAAAATGTGCATCTTGGTAAGGAAAAAAGAGAGCGGGCACCGGAGCCGG				19qB	PREDICTED: Mus musculus RIKEN cDNA 2410127L17 gene, transcript variant 3 (2410127L17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213001	ILMN_213001	CTDSPL	NM_133710.1	NM_133710.1		69274	19526887	NM_133710.1	Ctdspl	NP_598471.2	ILMN_2632489	006980273	S	4482	TTACTGTAAATCTGACCATGTCTATCCCTGGAGTCGCCCTGAGGATAGGT	9	+	118892589-118892638	9qF3	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like (Ctdspl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	AI426263; SCP3; 2810418J22Rik; HYA22	AI426263; SCP3; 2810418J22Rik; HYA22
Mus musculus	RefSeq	ILMN_218035	ILMN_218035	CEP72	NM_028959.1	NM_028959.1		74470	21312771	NM_028959.1	Cep72	NP_083235.2	ILMN_2950928	005570047	S	362	AGTCTGACTACCGCCTGTTTGTCGTGCACATGCTCCCGAAGCTCCGACAG	13	-	74524304-74524353	13qC1	Mus musculus centrosomal protein 72 (Cep72), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2610029E11Rik; 4933440J22Rik	2610029E11Rik; 4933440J22Rik
Mus musculus	Riken	ILMN_202262	ILMN_202262	1300013B24RIK	ri|1300013B24|R000011D15|AK004981|3343					AK004981	1300013B24Rik		ILMN_1220546	005260246	S	2979	GACCCTGAGGTCACTTGTGACGTAAGATGCTATCCTACTGTGTGCTCAGC										
Mus musculus	MEEBO	ILMN_188659	ILMN_188659	4930463O16RIK	scl5322.1.1_229				51765973	XM_483933	4930463O16Rik		ILMN_2454603	001500438	S	15	AAAATTCAAGGCTGTGCTCACATTGTTGCTAACCAGTCTGCTCTTCCCTC										
Mus musculus	MEEBO	ILMN_188659	ILMN_188659	4930463O16RIK	scl5322.1.1_229				51765973	XM_483933	4930463O16Rik		ILMN_2723120	001030129	S	1918	CCGTGGAACCACATGGCAGACCACTCACGTTTCCCAGTCTGGTTTGGATC										
Mus musculus	RefSeq	ILMN_210973	ILMN_236842	4631422C13RIK	XM_984472.1	XM_984472.1		70799	94404986	XM_984472.1	4631422C13Rik	XP_989566.1	ILMN_2635523	000830504	S	7826	ACAGATGAAGGCAAGAGTATTGCTATTCGACTAATCGGTGAATCCCTTGG					PREDICTED: Mus musculus RIKEN cDNA 4631422C13 gene (4631422C13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210973	ILMN_236842	4631422C13RIK	XM_984472.1	XM_984472.1		70799	94404986	XM_984472.1	4631422C13Rik	XP_989566.1	ILMN_2611186	001230241	S	7480	CAGAGATGCCCTCATTAAAGTAGATACCGCAGTCACATCCCGGAGGCGCG					PREDICTED: Mus musculus RIKEN cDNA 4631422C13 gene (4631422C13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201281	ILMN_201281	LOC382363	XM_356463.1	XM_356463.1			38090468	XM_356463.1	LOC382363		ILMN_2541736	001740152	S	259	CCTATCACTCGTTCTAAAGCCATGACCAAGCCCCCAAGCTCTCCTCCCCT										
Mus musculus	Riken	ILMN_204833	ILMN_204833	C630004M23RIK	ri|C630004M23|PX00083P09|AK049866|1684					AK049866	C630004M23Rik		ILMN_1250965	003800364	S	1233	CACTCAGGAGGCTGAGGCAATCATAAGCTAGAGGCCAACTAGAGTCACCG										
Mus musculus	RefSeq	ILMN_187551	ILMN_239836	SSH1	NM_198109.4	NM_198109.4		231637	146198760	NM_198109.4	Ssh1	NP_932777.2	ILMN_1244009	007050022	S	3110	GCCCCAGAACACTTGAAAAGCCCGTCGAGGGTAAACAAAAGCTGACTAGC				5qF	Mus musculus slingshot homolog 1 (Drosophila) (Ssh1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	AW551225; mSSH-1L; SSH-1; Gm1394; Gm1395	AW551225; mSSH-1L; SSH-1; Gm1394; Gm1395
Mus musculus	MEEBO	ILMN_209790	ILMN_209790	SNX2	scl51947.8_27				13385877	NM_026386	Snx2		ILMN_2664491	001980703	S	260	CTTGGACAGTCCCGAAAGAGAGCTCATCCTGTCCTCCGAGCCGTCTCCTG							The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_209790	ILMN_209790	SNX2	scl51947.8_27				13385877	NM_026386	Snx2		ILMN_1254113	007560110	S	259	CCTTGGACAGTCCCGAAAGAGAGCTCATCCTGTCCTCCGAGCCGTCTCCT							The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_202656	ILMN_202656	6720407G21RIK	ri|6720407G21|PX00059C23|AK020104|967					AK020104	6720407G21Rik		ILMN_2551272	003390324	S	592	CCGACTTGGTTAGAGTCACCAGCTTGAGACCTTTGTGGATTGGTAGTGGG										
Mus musculus	MEEBO	ILMN_185361	ILMN_185361	C78339	scl45484.1_156				51829624	XM_127312	C78339		ILMN_2426398	004260048	S	2	GGCTGCAGAACTCTGGCCTCCAAAGTTGTTTCTTCCTGGGTGACAGAAGC										
Mus musculus	MEEBO	ILMN_185361	ILMN_185361	C78339	scl45484.1_156				51829624	XM_127312	C78339		ILMN_1246895	001260463	S	3565	CGTGCCTGGGTGAAGTTCCTCATTTTGGCTGGTATGTGTAGATTTCCTTG										
Mus musculus	RefSeq	ILMN_219255	ILMN_219255	CYHR1	NM_180962.1	NM_180962.1		54151	30725866	NM_180962.1	Cyhr1	NP_851293.1	ILMN_1228937	003390605	S	1008	CTAATGGGCAGAGCTTGGGTGCTATCCCTTCTCTAGTCATGCATGTGTGG	15	-	76488679-76488728	15qD3	Mus musculus cysteine and histidine rich 1 (Cyhr1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU042374; 1110031M01Rik; Chrp	AU042374; 1110031M01Rik; Chrp
Mus musculus	RefSeq	ILMN_218753	ILMN_311493	6030452D12RIK	XR_035344.1	XR_035344.1		330837	149259265	XR_035344.1	6030452D12Rik		ILMN_1236314	007040020	S	2710	ACGGGGAATGGGGCCGTTGGAACCTGTGCATGGGGTGGCAAGTCTTAGTA				8qD3	PREDICTED: Mus musculus RIKEN cDNA 6030452D12 gene (6030452D12Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_212679	ILMN_212679	COG2	NM_029746.2	NM_029746.2		76332	24475693	NM_029746.2	Cog2	NP_084022.1	ILMN_1237463	007400343	S	2478	GTCTACAATATGGTAAAAGTAAATCGACAAGTGTGGCTGGTGGGCTGTCC	8	+	127075621-127075670	8qE2	Mus musculus component of oligomeric golgi complex 2 (Cog2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C86089; 1190002B08Rik; 2700012E02Rik; Ldlc	C86089; 1190002B08Rik; 2700012E02Rik; Ldlc
Mus musculus	RefSeq	ILMN_260084	ILMN_260084	CRXOS1	NM_001033638.1	NM_001033638.1		546024	84370317	NM_001033638.1	Crxos1	NP_001028810.1	ILMN_3138419	007400435	A	851	CTTTTCAACTTCTTGGTGGGGGCAGGCGTCTGTCTATGGGAGAAGGTACA	7	+	16489286-16489335	7qA2	Mus musculus Crx opposite strand transcript 1 (Crxos1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA606869; CrxOS; AY590891	AA606869; CrxOS; AY590891
Mus musculus	RefSeq	ILMN_260084	ILMN_260084	CRXOS1	NM_001033638.1	NM_001033638.1		546024	84370317	NM_001033638.1	Crxos1	NP_001028810.1	ILMN_3061023	003830736	I	11	TGGAGGGTCCCTGCTCAGTGCGCCCAACTTGAAGCTCAGTTTGAATCCTA	7	+	16481483-16481532	7qA2	Mus musculus Crx opposite strand transcript 1 (Crxos1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA606869; CrxOS; AY590891	AA606869; CrxOS; AY590891
Mus musculus	RefSeq	ILMN_215834	ILMN_215834	PYCR1	NM_144795.2	NM_144795.2		209027	110625891	NM_144795.2	Pycr1	NP_659044.1	ILMN_2849521	004920102	S	2735	GTTTTCTTGAGATAGGGTTTCTCTGTGTAGCCCTTGCTGTTCTGGAACTG				11qE2	Mus musculus pyrroline-5-carboxylate reductase 1 (Pycr1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [evidence IEA]	MGC11688	MGC11688
Mus musculus	RefSeq	ILMN_219847	ILMN_219847	SIRPB1	NM_178792.2	NM_178792.2		320832	31341938	NM_178792.2	Sirpb1	NP_848907.1	ILMN_2714330	002070577	S	1574	GAGCATGTGATCTGGACTAATGAAATAAAGGAAAATCAAATGTCCATTGG	3	-	15386668-15386717	3qA1	Mus musculus signal-regulatory protein beta 1 (Sirpb1), transcript variant 1, mRNA.				SIRP-beta; 9930027N05Rik; Sirpb	SIRP-beta; 9930027N05Rik; Sirpb
Mus musculus	RefSeq	ILMN_254411	ILMN_254411	D9ERTD402E	NM_001013405.1	NM_001013405.1		382117	61696135	NM_001013405.1	D9Ertd402e	NP_001013423.1	ILMN_2881610	002340390	S	2829	AGAGTAACCCTGTCTGGGGGGTGGGGCCGTCAAACCTGACATTTATTAGA	9	+	122745281-122745330	9qF4	Mus musculus DNA segment, Chr 9, ERATO Doi 402, expressed (D9Ertd402e), mRNA.				Gm1129; MGC91156	Gm1129; MGC91156
Mus musculus	RefSeq	ILMN_201252	ILMN_254411	D9ERTD402E	NM_001013405.1	NM_001013405.1		382117	61696135	NM_001013405.1	D9Ertd402e	NP_001013423.1	ILMN_2541637	004220537	S	1584	TGCAAGATGGAGACCTGTGCATCCCGTGGAACTGGAAGAAAGGAGAAGCC	9	+	122744036-122744085	9qF4	Mus musculus DNA segment, Chr 9, ERATO Doi 402, expressed (D9Ertd402e), mRNA.				Gm1129; MGC91156	Gm1129; MGC91156
Mus musculus	RefSeq	ILMN_222264	ILMN_222264	IGFBP2	NM_008342.2	NM_008342.2		16008	31982259	NM_008342.2	Igfbp2	NP_032368.2	ILMN_1236788	001230240	S	371	TGCTATCCCAACCCGGGCTCCGAGCTGCCCCTGAAGGCGCTTGTCACAGG	1	+	72871442-72871491	1qC3	Mus musculus insulin-like growth factor binding protein 2 (Igfbp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	Igfbp-2; AI255832	Igfbp-2; AI255832
Mus musculus	RefSeq	ILMN_222264	ILMN_222264	IGFBP2	NM_008342.2	NM_008342.2		16008	31982259	NM_008342.2	Igfbp2	NP_032368.2	ILMN_2930897	000580364	S	1113	TATTTGGAAAGAGACCAACACTGAGCTCAGAAGCCCCCCTCTGACCCCCC	1	+	72898849-72898898	1qC3	Mus musculus insulin-like growth factor binding protein 2 (Igfbp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	Igfbp-2; AI255832	Igfbp-2; AI255832
Mus musculus	RefSeq	ILMN_217471	ILMN_217471	MATR3	NM_010771.3	NM_010771.3		17184	31559892	NM_010771.3	Matr3	NP_034901.2	ILMN_2936351	004900332	S	3579	CTTGACGCACGCTTCTAATTCATGTACCTGCACATGTGACCTTTGTGAGC	18	+	35717236-35717285	18qB2	Mus musculus matrin 3 (Matr3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mKIAA0723; D030046F20Rik; AI841759; AW555618	mKIAA0723; D030046F20Rik; AI841759; AW555618
Mus musculus	RefSeq	ILMN_218697	ILMN_241903	KRT39	NM_213730.2	NM_213730.2		237934	153945855	NM_213730.2	Krt39	NP_998895.2	ILMN_2699061	005900114	S	1089	CCGCAGTGCCCTGCAAAGACAGAGCCAGGAATATGAAGTTCTGCTAGACA				11qD	Mus musculus keratin 39 (Krt39), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Ka35; 4732494G06Rik	Ka35; 4732494G06Rik
Mus musculus	RefSeq	ILMN_223741	ILMN_223741	PCOLN3	NM_145606.1	NM_145606.1		234852	21704219	NM_145606.1	Pcoln3	NP_663581.1	ILMN_2847502	006220619	S	1868	GGCTGGAATTGTTGCCCTGCGTGTGGGGACCAAGGTACAATCTAACCATG	8	-	126090554-126090603	8qE1	Mus musculus procollagen (type III) N-endopeptidase (Pcoln3), mRNA.				2900018H07Rik	2900018H07Rik
Mus musculus	Riken	ILMN_204225	ILMN_204225	A730059B08RIK	ri|A730059B08|PX00151E21|AK043137|1220					AK043137	A730059B08Rik		ILMN_1251509	003140747	S	1105	CCAGCACAGAGCCAGACAAATCTCTGAGTTAGAGTTCAGCCAGCCCAGCC										
Mus musculus	RefSeq	ILMN_209049	ILMN_209049	OLFR397	NM_146346.1	NM_146346.1		258343	22129609	NM_146346.1	Olfr397	NP_666458.1	ILMN_1214925	003830082	S	562	GCCTGCTCTGACATTCAGATCAATAAGTTGATGATATTTATCTTGGGAGG	11	+	73778673-73778722	11qB4	Mus musculus olfactory receptor 397 (Olfr397), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-360H16.7; MOR135-28	RP23-360H16.7; MOR135-28
Mus musculus	RefSeq	ILMN_208911	ILMN_208911	KIF3C	NM_008445.2	NM_008445.2		16570	84781816	NM_008445.2	Kif3c	NP_032471.2	ILMN_2590729	000110634	S	4136	CGGAGAGAACCAGAGCCCTTCTCCCCTTACTGAATGCAGATAACAAAATC	12	+	3403781-3403830	12qA1.1	Mus musculus kinesin family member 3C (Kif3c), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	mKIAA4058; KIAA4058	mKIAA4058; KIAA4058
Mus musculus	RefSeq	ILMN_208911	ILMN_208911	KIF3C	NM_008445.2	NM_008445.2		16570	84781816	NM_008445.2	Kif3c	NP_032471.2	ILMN_2593410	004670487	S	4300	TGAAAAATCAATCCATTCTTTACCACTTGTGTGGCTTGGTCCTTCCTCAC	12	+	3403945-3403994	12qA1.1	Mus musculus kinesin family member 3C (Kif3c), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	mKIAA4058; KIAA4058	mKIAA4058; KIAA4058
Mus musculus	RefSeq	ILMN_215132	ILMN_208911	KIF3C	NM_008445.2	NM_008445.2		16570	84781816	NM_008445.2	Kif3c	NP_032471.2	ILMN_1238967	002480441	S	4929	CAAGGTTTCAGTTTATAGAATGGGCTATCATCACTGGCAATTCTTCTACC	12	+	3404574-3404623	12qA1.1	Mus musculus kinesin family member 3C (Kif3c), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	mKIAA4058; KIAA4058	mKIAA4058; KIAA4058
Mus musculus	MEEBO	ILMN_223439	ILMN_223439	CRTAC1	scl52473.16_34	NM_145123.2			31559946	NM_145123.2	Crtac1		ILMN_2764112	001190437	S	2379	CCTATGATTACGGAAGCCTTATTGGATTGGTGGTGGCGACGGAAAGGGAA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	Riken	ILMN_205329	ILMN_205329	COPG2	ri|A330060M07|PX00132B16|AK079599|1951					AK079599	Copg2		ILMN_1213961	002510446	S	1685	CACTTCTCTTCTAACACCTCAGCCGGGAAGGGCACGGTGAAACTACGTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193475	ILMN_227041	UBXN2B	NM_026534.2	NM_026534.2		68053	68342025	NM_026534.2	Ubxn2b	NP_080810.2	ILMN_2668828	006620324	S	1212	GTAGGGCTGGCTTGTATTGATAGCTTATAAATGTTTAGATCAGTCAACTT	4	+	6143412-6143461	4qA1	Mus musculus UBX domain protein 2B (Ubxn2b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			RP23-340E12.2; p37; AI451665; 6430407D20Rik	RP23-340E12.2; p37; AI451665; 6430407D20Rik
Mus musculus	RefSeq	ILMN_199575	ILMN_199575	LOC383674	XM_357179.1	XM_357179.1			38074486	XM_357179.1	LOC383674		ILMN_1252534	000870358	S	314	AAACTCACAAGGATGTTGTTGGAACCGGGAGGACCATGACAGCCCTGCTC										
Mus musculus	RefSeq	ILMN_219203	ILMN_238778	DYRK1B	NM_010092.1	NM_010092.1		13549	6753697	NM_010092.1	Dyrk1b	NP_034222.1	ILMN_2705642	006100482	S	1482	CCGGCGCCCCTTGACACCTGCCCCTCCTCTAGCACCGCCAGCTCCATCTC	7	+	28970991-28971040	7qA3	Mus musculus dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b (Dyrk1b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Mirk	Mirk
Mus musculus	RefSeq	ILMN_209021	ILMN_209021	SFRS1	NM_173374.3	NM_173374.3		110809	91598842	NM_173374.3	Sfrs1	NP_775550.2	ILMN_3142235	000830095	A	2390	GGAGCGGGATCAGATTACCAGGAACATAGGAGTGGATTCCTTCCTGCCCC	11	+	87864583-87864632	11qC	Mus musculus splicing factor, arginine/serine-rich 1 (ASF/SF2) (Sfrs1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IGI]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]	AI482334; Asf; 5730507C05Rik; Sf2; AW491331; 6330415C05Rik; 1110054N12Rik	AI482334; Asf; 5730507C05Rik; Sf2; AW491331; 6330415C05Rik; 1110054N12Rik
Mus musculus	RefSeq	ILMN_209021	ILMN_209021	SFRS1	NM_173374.3	NM_173374.3		110809	91598842	NM_173374.3	Sfrs1	NP_775550.2	ILMN_2591814	006510333	S	2581	GCGAGGACCTGGAGATATACGCTGGAGCAATCTCCTTGGAAGGATTCAGC	11	+	87864774-87864823	11qC	Mus musculus splicing factor, arginine/serine-rich 1 (ASF/SF2) (Sfrs1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IGI]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]	AI482334; Asf; 5730507C05Rik; Sf2; AW491331; 6330415C05Rik; 1110054N12Rik	AI482334; Asf; 5730507C05Rik; Sf2; AW491331; 6330415C05Rik; 1110054N12Rik
Mus musculus	Riken	ILMN_206175	ILMN_206175	D630011A20RIK	ri|D630011A20|PX00196O13|AK085316|502					AK085316	D630011A20Rik		ILMN_2578147	006250678	S	410	CACCGCATGGCCCTGAGTGTCCCTGATGGATGTGTATGACCCTTTATGTG										
Mus musculus	RefSeq	ILMN_217526	ILMN_217526	P2RY1	NM_008772.4	NM_008772.4		18441	145966794	NM_008772.4	P2ry1	NP_032798.1	ILMN_2684316	002070440	S	3662	CCTGTAAAAGCACAGTATTGTTTGGCTGGAGGGAGCTGCAGAATCGCCCA				3qD	Mus musculus purinergic receptor P2Y, G-protein coupled 1 (P2ry1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 43270] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 43270] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y1	P2Y1
Mus musculus	MEEBO	ILMN_189898	ILMN_189898	FDPS	scl21952.1_54				31982573	NM_134469	Fdps		ILMN_1232741	002690424	S	1	GGGTCCTGCAGTTGGGTTCCTTGATGAGGAGACTAAGCTTATTTCTTGCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate [goid 4161] [evidence IEA]; Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = diphosphate + trans,trans-farnesyl diphosphate [goid 4337] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221660	ILMN_313555	1110021L09RIK	XM_001474669.1	XM_001474669.1		76306	149260671	XM_001474669.1	1110021L09Rik	XP_001474719.1	ILMN_2738655	002630364	S	2689	GCTCCACGTTGGAGAAACACTCCAACTTCACAGAAAATCCTTGCTGCTAC	10	+	23547626-23547675	10qA3-qA4	PREDICTED: Mus musculus RIKEN cDNA 1110021L09 gene (1110021L09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221145	ILMN_221145	SH3GLB1	NM_019464.2	NM_019464.2		54673	118130734	NM_019464.2	Sh3glb1	NP_062337.1	ILMN_1250213	002680184	S	861	AACTCAAAGTGAATTTGATCGTCAGGCAGAGATTACCCGACTCCTGCTTG	3	-	144360361-144360410	3qH2	Mus musculus SH3-domain GRB2-like B1 (endophilin) (Sh3glb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence ISO]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IC ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids [goid 6654] [evidence IDA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IDA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence ISO]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; The process by which a protein is incorporated into a mitochondrial membrane as an early step in apoptosis [goid 1844] [evidence IMP]; The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis [goid 51084] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 5504] [evidence IDA]; Interacting selectively with a lipid [goid 8289] [evidence IEA];  [goid 42171] [evidence IDA]	AU015566; AA409932; Bif-1; KIAA0491; AI314629; mKIAA0491	AU015566; AA409932; Bif-1; KIAA0491; AI314629; mKIAA0491
Mus musculus	RefSeq	ILMN_221145	ILMN_221145	SH3GLB1	NM_019464.2	NM_019464.2		54673	118130734	NM_019464.2	Sh3glb1	NP_062337.1	ILMN_2732362	003800037	S	3847	GGCCCTCTACAAACTGAAAAAGAAGTGGATTTTAACTACCTTTGTCCTTA	3	-	144351860-144351909	3qH2	Mus musculus SH3-domain GRB2-like B1 (endophilin) (Sh3glb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence ISO]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IC ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids [goid 6654] [evidence IDA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IDA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence ISO]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; The process by which a protein is incorporated into a mitochondrial membrane as an early step in apoptosis [goid 1844] [evidence IMP]; The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis [goid 51084] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 5504] [evidence IDA]; Interacting selectively with a lipid [goid 8289] [evidence IEA];  [goid 42171] [evidence IDA]	AU015566; AA409932; Bif-1; KIAA0491; AI314629; mKIAA0491	AU015566; AA409932; Bif-1; KIAA0491; AI314629; mKIAA0491
Mus musculus	RefSeq	ILMN_187732	ILMN_187732	SLC46A2	NM_021053.3	NM_021053.3		30936	142386973	NM_021053.3	Slc46a2	NP_066395.2	ILMN_2446648	006100228	S	2361	CTTCCCAGCAATCCCAGCAGACTTCCTTAGTGGAATACACAACTGACCAC	4	-	59918420-59918469	4qB3	Mus musculus solute carrier family 46, member 2 (Slc46a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tscot; TSO-1C12; Ly110; 5430429N04Rik	Tscot; TSO-1C12; Ly110; 5430429N04Rik
Mus musculus	RefSeq	ILMN_218538	ILMN_218538	DLG1	NM_007862.2	NM_007862.2		13383	40254641	NM_007862.2	Dlg1	NP_031888.2	ILMN_2763839	006580202	S	823	TCCCATTGTCCCTGTGACCCCTGCCCTGCCAGTCCCTGCTGAGAGTACTG	16	+	31771868-31771917	16qB2	Mus musculus discs, large homolog 1 (Drosophila) (Dlg1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An adherens junction which connects two cells to each other [goid 5913] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence TAS]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence TAS]; Branching of the ureteric bud [goid 1658] [evidence IMP]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The chemical reactions and pathways involving amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42982] [evidence IGI]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; Any process that contributes to cytokine production by a T cell [goid 2369] [evidence IMP]; Any process that activates, maintains or increases the rate of developmental growth [goid 48639] [evidence TAS]; Any process that initiates the activity of an inactive protein kinase [goid 32147] [evidence IMP]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IMP]; The process by which the anatomical structures of a tissue are generated and organized. Morphogenesis pertains to the creation of form [goid 48729] [evidence IMP]; The biological process whose specific outcome is the progression of the hard palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The hard palate is the anterior portion of the palate consisting of bone and mucous membranes [goid 60022] [evidence IMP]; The reproductive developmental process whose specific outcome is the progression of structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures [goid 48608] [evidence IMP]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]; The biological process whose specific outcome is the progression of the hard palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The hard palate is the anterior portion of the palate consisting of bone and mucous membranes [goid 60022] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The formation of an area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and target cell, which facilitates activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1771] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of membrane rafts, small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes [goid 31579] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to provide a physical support for the assembly of a multiprotein complex [goid 32947] [evidence IMP]	KIAA4187; B130052P05Rik; SAP97; Dlgh1; mKIAA4187	KIAA4187; B130052P05Rik; SAP97; Dlgh1; mKIAA4187
Mus musculus	RefSeq	ILMN_211328	ILMN_211328	CSF3	NM_009971.1	NM_009971.1		12985	6753535	NM_009971.1	Csf3	NP_034101.1	ILMN_2744018	006900039	S	293	AAGCTGTGTCACCCCGAGGAGCTGGTGTTGCTGGGCCACTCTCTGGGGAT	11	+	98563352-98563401	11qD	Mus musculus colony stimulating factor 3 (granulocyte) (Csf3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils [goid 30851] [evidence NAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence NAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Csfg; G-CSF; MGI-IG	Csfg; G-CSF; MGI-IG
Mus musculus	RefSeq	ILMN_211328	ILMN_211328	CSF3	NM_009971.1	NM_009971.1		12985	6753535	NM_009971.1	Csf3	NP_034101.1	ILMN_1217948	007200762	S	289	TACAAGCTGTGTCACCCCGAGGAGCTGGTGTTGCTGGGCCACTCTCTGGG	11	+	98563348-98563397	11qD	Mus musculus colony stimulating factor 3 (granulocyte) (Csf3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils [goid 30851] [evidence NAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence NAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Csfg; G-CSF; MGI-IG	Csfg; G-CSF; MGI-IG
Mus musculus	Riken	ILMN_201748	ILMN_201748	MRPL38	ri|2810421K06|ZX00046F23|AK013126|678					AK013126	Mrpl38		ILMN_2544278	004830367	S	349	CCCCGGAACGAGAAGGACCTGCGTGCCCCTCAGACGTGTAGTTCTGAATT						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence ISS]				
Mus musculus	RefSeq	ILMN_219968	ILMN_219968	SLITRK4	NM_178740.4	NM_178740.4		245446	142357201	NM_178740.4	Slitrk4	NP_848855.2	ILMN_2715848	005550274	S	3643	CCTTAAAGGTTGTCCAAAATTAGCAAGTGCTTACCGTGTGAGCGCACCCA	X	-	61522861-61522910	XqA7.1	Mus musculus SLIT and NTRK-like family, member 4 (Slitrk4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6430513G13; D930039I09Rik	6430513G13; D930039I09Rik
Mus musculus	RefSeq	ILMN_215624	ILMN_252408	ZFP429	NM_001080941.1	NM_001080941.1		72807	124301191	NM_001080941.1	Zfp429	NP_001074410.1	ILMN_2661744	003060671	S	230	CATTTCTGGAGCAAAGACAAGGGCCTTGGGATATGAAGAGACAAGGAGCG	13	-	67496995-67497044	13qB3	Mus musculus zinc finger protein 429 (Zfp429), mRNA. XM_985158 XM_985191 XM_985227 XM_985266 XM_990399	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI929863; Rsl2	AI929863; Rsl2
Mus musculus	RefSeq	ILMN_193449	ILMN_252408	ZFP429	NM_001080941.1	NM_001080941.1		72807	124301191	NM_001080941.1	Zfp429	NP_001074410.1	ILMN_2497312	000770204	S	1983	TTATACTTCTTCAGCCCTCAAAAGACCTCAACTAATTCATACTGAATAAA	13	-	67490263-67490312	13qB3	Mus musculus zinc finger protein 429 (Zfp429), mRNA. XM_985158 XM_985191 XM_985227 XM_985266 XM_990399	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI929863; Rsl2	AI929863; Rsl2
Mus musculus	RefSeq	ILMN_190388	ILMN_252408	ZFP429	NM_001080941.1	NM_001080941.1		72807	124301191	NM_001080941.1	Zfp429	NP_001074410.1	ILMN_1254717	000940768	S	745	GTCAAAAGATTTCCCCCTCCTCTACCGCTTCAGGAACATGAGCAAATCCG	13	-	67491501-67491550	13qB3	Mus musculus zinc finger protein 429 (Zfp429), mRNA. XM_985158 XM_985191 XM_985227 XM_985266 XM_990399	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI929863; Rsl2	AI929863; Rsl2
Mus musculus	MEEBO	ILMN_216469	ILMN_216469	LOC223672	scl0223672.1_326	XM_128064.4			38077835	XM_128064.4	LOC223672		ILMN_2671435	006110671	S	1433	CCAGCCCACGCCCATCCTCAGGCATGTCATTGTCCCCTAAATAAACCGTT										
Mus musculus	RefSeq	ILMN_211738	ILMN_254433	HSD3B3	NM_001012306.1	NM_001012306.1		15494	59858544	NM_001012306.1	Hsd3b3	NP_001012306.1	ILMN_2619034	003830487	S	543	AGTCAATTCCTTTCTAACACAATAATTAAGGCCCTCAAAAATAAGTTTAT	3	-	98546296-98546345	3qF2.2	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 (Hsd3b3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid [goid 4769] [evidence IEA]	AI790201; MGC107584; 9030618K22Rik	AI790201; MGC107584; 9030618K22Rik
Mus musculus	RefSeq	ILMN_222395	ILMN_227608	ROGDI	NM_133185.2	NM_133185.2		66049	119508430	NM_133185.2	Rogdi	NP_573448.2	ILMN_1222821	006350639	S	1095	GAGGGGTCAGTCAAGAAGATGAGCTGAGGTGTGACCATGCTCCTAACCCT	16	-	5009069-5009118	16qA1	Mus musculus rogdi homolog (Drosophila) (Rogdi), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lzf; AU020118; C76152; 0610011C19Rik	Lzf; AU020118; C76152; 0610011C19Rik
Mus musculus	RefSeq	ILMN_204140	ILMN_246682	DOCK9	XM_906686.2	XM_906686.2		105445	94397749	XM_906686.2	Dock9	XP_911779.1	ILMN_1252091	003780273	S	6619	GTGAGCAGATGGGATGATTTGCCCCCTGGAGGAGAAGACAAGCGTGCTAC				14qE5	PREDICTED: Mus musculus dedicator of cytokinesis 9, transcript variant 19 (Dock9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210891	ILMN_210891	PFN2	NM_019410.2	NM_019410.2		18645	31980876	NM_019410.2	Pfn2	NP_062283.1	ILMN_1235670	006840390	S	504	GGGGAAAATTGCTCTTAAATTTTCCTAGCTGTAAGCTTAAGTCTCCTTTG	3	-	57647063-57647112	3qD	Mus musculus profilin 2 (Pfn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pfn	Pfn
Mus musculus	RefSeq	ILMN_210891	ILMN_210891	PFN2	NM_019410.2	NM_019410.2		18645	31980876	NM_019410.2	Pfn2	NP_062283.1	ILMN_2929791	005720241	S	1352	GCCATTATGGATATTAGGTATCCCAACATAACCATCTGGAGTGTGTCCAG	3	-	57646215-57646264	3qD	Mus musculus profilin 2 (Pfn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pfn	Pfn
Mus musculus	RefSeq	ILMN_210891	ILMN_210891	PFN2	NM_019410.2	NM_019410.2		18645	31980876	NM_019410.2	Pfn2	NP_062283.1	ILMN_1260064	000290672	S	1561	CGAATGGCACTACCTTAGGGACATTCTAGTATTGCTTCTATTGTTTGGGC	3	-	57646006-57646055	3qD	Mus musculus profilin 2 (Pfn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pfn	Pfn
Mus musculus	RefSeq	ILMN_220241	ILMN_312197	2210415F13RIK	NM_001083884.1	NM_001083884.1		70163	139949232	NM_001083884.1	2210415F13Rik	NP_001077353.1	ILMN_1227061	001030538	S	569	CACTCTGCGAGGAGAAACCCCAAAAGTGTTACGAAGGAGAACAATGTGTC	11	+	58200284-58200333	11qB1.3	Mus musculus RIKEN cDNA 2210415F13 gene (2210415F13Rik), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			RP23-465K20.2	RP23-465K20.2
Mus musculus	RefSeq	ILMN_221465	ILMN_221465	EMG1	NM_013536.1	NM_013536.1		14791	7305108	NM_013536.1	Emg1	NP_038564.1	ILMN_2735981	001850538	S	877	TCCTAAGATCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGG	6	-	124654988-124655037	6qF2	Mus musculus EMG1 nucleolar protein homolog (S. cerevisiae) (Emg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		C2f; Grcc2f	C2f; Grcc2f
Mus musculus	RefSeq	ILMN_221465	ILMN_221465	EMG1	NM_013536.1	NM_013536.1		14791	7305108	NM_013536.1	Emg1	NP_038564.1	ILMN_2744237	003420025	S	605	ATTGGCACTTCCTTTTCTGTTGAAGACATCAGTGACATTCGAGAGTTGGT	6	-	124655627-124655674:124655759-124655760	6qF2	Mus musculus EMG1 nucleolar protein homolog (S. cerevisiae) (Emg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		C2f; Grcc2f	C2f; Grcc2f
Mus musculus	RefSeq	ILMN_216179	ILMN_216179	ZFP414	NM_026712.2	NM_026712.2		328801	133892660	NM_026712.2	Zfp414	NP_080988.1	ILMN_1225086	001050086	S	834	TTCCATACTTGAACCCTGCACCCTTTGGCCTGAGTCCCCCTCGACTGCGC	17	+	33768295-33768344	17qB1	Mus musculus zinc finger protein 414 (Zfp414), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	0610030H11Rik; MGC49274	0610030H11Rik; MGC49274
Mus musculus	RefSeq	ILMN_251569	ILMN_251569	CDH8	NM_001039154.1	NM_001039154.1		12564	85662401	NM_001039154.1	Cdh8	NP_001034243.1	ILMN_3163448	000730041	A	2355	CATCCGAGTCTGTGGCTGTAGCAATGATGGCGTGGTCCAGTCGTGCAATG	8	-	101557187-101557236	8qD1	Mus musculus cadherin 8 (Cdh8), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI851472; cad8	AI851472; cad8
Mus musculus	RefSeq	ILMN_251569	ILMN_251569	CDH8	NM_001039154.1	NM_001039154.1		12564	85662401	NM_001039154.1	Cdh8	NP_001034243.1	ILMN_3162873	004900424	I	3379	GCGCAGAACGTCTTAGACTACAAAAGCAGATCAGCACTAGAAGATGTGAG	8	-	101553048-101553097	8qD1	Mus musculus cadherin 8 (Cdh8), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI851472; cad8	AI851472; cad8
Mus musculus	MEEBO	ILMN_216193	ILMN_216193	NOTCH4	scl50817.30.1_11	NM_010929.1			6754873	NM_010929.1	Notch4		ILMN_1256134	006380669	S	5695	TTGGTCGGTGGACTTGGGAGCGCGCGGAGGGAAGGTGTATGCTCGCTGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence TAS]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell differentiation [goid 45602] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189987	ILMN_189987	2810410C14RIK	scl25167.9_473				31341983	NM_175471	2810410C14Rik		ILMN_2466190	006370746	S	11	GCTCAGCTGCAAGCACAGAACCTGATGGAGAGATGAAATCCAGGTGTTGG							The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189987	ILMN_189987	2810410C14RIK	scl25167.9_473				31341983	NM_175471	2810410C14Rik		ILMN_1244624	005490598	S	16	GCTGCAAGCACAGAACCTGATGGAGAGATGAAATCCAGGTGTTGGTTCCC							The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198682	ILMN_321956	RGAG1	XM_001474906.1	XM_001474906.1		209540	149272301	XM_001474906.1	Rgag1	XP_001474956.1	ILMN_1255714	005220392	S	3780	AGCTGTTACCACCAAAATGGGCCGTATCTTCCTGAAGGTGGCCGGCAGCC				XqF2	PREDICTED: Mus musculus retrotransposon gag domain containing 1 (Rgag1), mRNA.					
Mus musculus	RefSeq	ILMN_219602	ILMN_257568	9030421J09RIK	NM_177744.3	NM_177744.3		245282	146198684	NM_177744.3	9030421J09Rik	NP_808412.1	ILMN_1235401	005700605	S	2933	CAGAGTCACACACTGATTTGAAAAATGTGGAGAGATTTGTGTTTTAGGGA				15qE1	Mus musculus RIKEN cDNA 9030421J09 gene (9030421J09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219602	ILMN_257568	9030421J09RIK	NM_177744.3	NM_177744.3		245282	146198684	NM_177744.3	9030421J09Rik	NP_808412.1	ILMN_2745233	006560471	S	153	GGACATTAGGAAAGTGGAACGTCGCATTGTTGAAAAATTCATTGAAGATC				15qE1	Mus musculus RIKEN cDNA 9030421J09 gene (9030421J09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_192257	ILMN_192257	V1RH4	NM_134213.1	NM_134213.1		171247	21717746	NM_134213.1	V1rh4	NP_598974.1	ILMN_2486419	000620301	S	4	GGATGGGCTTCTGGTTGAACGTTGGCATGTTCAGTGGGAGAAATTGAGAA	13	+	22474410-22474459	13qA3.1	Mus musculus vomeronasal 1 receptor, H4 (V1rh4), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	MGC130175	MGC130175
Mus musculus	RefSeq	ILMN_192257	ILMN_192257	V1RH4	NM_134213.1	NM_134213.1		171247	21717746	NM_134213.1	V1rh4	NP_598974.1	ILMN_1253140	004180612	S	900	CTCCTCAAAGGACAACACCTTAATGGTAAATCCTCGAGAACTTCTGACCC	13	+	22475306-22475355	13qA3.1	Mus musculus vomeronasal 1 receptor, H4 (V1rh4), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	MGC130175	MGC130175
Mus musculus	Riken	ILMN_201667	ILMN_201667	1810006O10RIK	ri|1810006O10|R000022A11|AK007355|1729					AK007355	1810006O10Rik		ILMN_2543616	000360592	S	557	AGCTGGAGTCTGTTCCCTGTGAGACATCTCGGTTGCAAAAGCAAACCACA										
Mus musculus	MEEBO	ILMN_194582	ILMN_194582	LPIN1	scl42605.25_108				27923940	NM_015763	Lpin1		ILMN_2507725	007560376	S	4	GGCTTGGGAACCTAGTTTTGATATACCTTAAACTTCCCTGTCACTCTACC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; Any process that modulates the frequency, rate or extent of adipocyte differentiation [goid 45598] [evidence IMP]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell [goid 31529] [evidence IMP]	Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215104	ILMN_251628	GUCY2G	NM_001081076.1	NM_001081076.1		73707	124487300	NM_001081076.1	Gucy2g	NP_001074545.1	ILMN_2655559	004730678	S	3385	CGATGAATGCATCCAACATTCCTTTGAACAGTTGTAGCTCTGTGTCAATG	19	-	55273042-55273091	19qD2	Mus musculus guanylate cyclase 2g (Gucy2g), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence ISS]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IDA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence ISS]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IDA]	2410077I05Rik	2410077I05Rik
Mus musculus	RefSeq	ILMN_251628	ILMN_251628	GUCY2G	NM_001081076.1	NM_001081076.1		73707	124487300	NM_001081076.1	Gucy2g	NP_001074545.1	ILMN_3116817	007320437	A	3604	GTCCATCATGCCTTACTCTTTCTTGCGACACTTATTTCTTTGCCCCAGCC	19	-	55272823-55272872	19qD2	Mus musculus guanylate cyclase 2g (Gucy2g), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence ISS]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IDA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence ISS]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IDA]	2410077I05Rik	2410077I05Rik
Mus musculus	RefSeq	ILMN_186351	ILMN_232792	SLC25A36	NM_138756.4	NM_138756.4		192287	146149334	NM_138756.4	Slc25a36	NP_620095.1	ILMN_2733277	002900041	S	2818	TTGCCTCTTCAGGTGCCACTGATACTGCCTAATACAGCGCCATTTGCTCT				9qE3.3	Mus musculus solute carrier family 25, member 36 (Slc25a36), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C330005L02Rik	C330005L02Rik
Mus musculus	RefSeq	ILMN_196623	ILMN_232792	SLC25A36	NM_138756.4	NM_138756.4		192287	146149334	NM_138756.4	Slc25a36	NP_620095.1	ILMN_1245421	000010735	S	1176	AGGTACCATACGACATTAATCTTTCAGTGAGTAAACCCTGGGCCGCCTCG				9qE3.3	Mus musculus solute carrier family 25, member 36 (Slc25a36), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C330005L02Rik	C330005L02Rik
Mus musculus	RefSeq	ILMN_211988	ILMN_211988	ROS1	NM_011282.2	NM_011282.2		19886	114326509	NM_011282.2	Ros1	NP_035412.2	ILMN_2621507	001230646	S	7227	GGTGGCTTATGGCTCTCCTGGCCTGTCTGAAGGCCTGAATTATGCCTGTC	10	-	51765856-51765905	10qB3	Mus musculus Ros1 proto-oncogene (Ros1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Ros-1; c-ros	Ros-1; c-ros
Mus musculus	MEEBO	ILMN_224115	ILMN_224115	OLFR1167	scl0258291.1_154				22129696	NM_146294	Olfr1167		ILMN_2775079	002230433	S	720	CTCCACCTGTACTTCCCACTTGACTGCCATAACAATTTTCCATGGGATCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_211944	ILMN_211944	RBPMS2	NM_028030.3	NM_028030.3		71973	118130420	NM_028030.3	Rbpms2	NP_082306.2	ILMN_2621012	000060470	S	1197	GCAAATGTGTGTATGGTTTGTTCCCAAACTGTCGCCGTAGCAACAGGTCT	9	+	65507566-65507615	9qC	Mus musculus RNA binding protein with multiple splicing 2 (Rbpms2), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI316523; 2400008B06Rik	AI316523; 2400008B06Rik
Mus musculus	RefSeq	ILMN_198956	ILMN_198956	LOC234360	XM_134223.2	XM_134223.2			38090047	XM_134223.2	LOC234360		ILMN_2533526	004490504	S	368	GTTTTGCCACGGATGAAGAAACAGCTGAGTGGGTGAGACCATGCAGGTGC										
Mus musculus	RefSeq	ILMN_211390	ILMN_211390	FSD2	NM_172904.2	NM_172904.2		244091	116063549	NM_172904.2	Fsd2	NP_766492.2	ILMN_1242790	002760445	S	2890	TCAGAATAAACCTCTCCACTACCGCTCCCATGCAGTGAGTGCTGCCATGC	7	-	88679276-88679325	7qD3	Mus musculus fibronectin type III and SPRY domain containing 2 (Fsd2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Spryd1; 9830160G03Rik	Spryd1; 9830160G03Rik
Mus musculus	RefSeq	ILMN_211390	ILMN_211390	FSD2	NM_172904.2	NM_172904.2		244091	116063549	NM_172904.2	Fsd2	NP_766492.2	ILMN_2669120	006580400	S	2693	CAAGATCAGACTAGGAAAGGCAAGAAATTACAGAAAAAGAAGGAAGTCAG	7	-	88679473-88679522	7qD3	Mus musculus fibronectin type III and SPRY domain containing 2 (Fsd2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Spryd1; 9830160G03Rik	Spryd1; 9830160G03Rik
Mus musculus	RefSeq	ILMN_211390	ILMN_211390	FSD2	NM_172904.2	NM_172904.2		244091	116063549	NM_172904.2	Fsd2	NP_766492.2	ILMN_1215238	004810747	S	2723	CAGAAAAAGAAGGAAGTCAGGTGCCCATCTCAAGGCCATCGTGGACACTG	7	-	88679443-88679492	7qD3	Mus musculus fibronectin type III and SPRY domain containing 2 (Fsd2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Spryd1; 9830160G03Rik	Spryd1; 9830160G03Rik
Mus musculus	RefSeq	ILMN_211921	ILMN_211921	ABHD2	NM_018811.6	NM_018811.6		54608	146134439	NM_018811.6	Abhd2	NP_061281.3	ILMN_1252016	003450164	S	1898	GAAATTACTCAGCTTGGGAGTCTGAGAACCTGGGCCTTCCTGGGCCTGAG				7qD3	Mus musculus abhydrolase domain containing 2 (Abhd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Labh-2; 2210009N18Rik; LABH2; MGC107122	Labh-2; 2210009N18Rik; LABH2; MGC107122
Mus musculus	RefSeq	ILMN_211921	ILMN_211921	ABHD2	NM_018811.6	NM_018811.6		54608	146134439	NM_018811.6	Abhd2	NP_061281.3	ILMN_2620767	003800240	S	1653	CCATTGCATCGTTAGCCATGGTGACAAGCTACAAGATTCTCACCCTTCTG				7qD3	Mus musculus abhydrolase domain containing 2 (Abhd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Labh-2; 2210009N18Rik; LABH2; MGC107122	Labh-2; 2210009N18Rik; LABH2; MGC107122
Mus musculus	RefSeq	ILMN_214885	ILMN_214885	ODZ2	NM_011856.3	NM_011856.3		23964	154090988	NM_011856.3	Odz2	NP_035986.3	ILMN_1256981	007050408	S	8668	TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAA				11qA4-qA5	Mus musculus odd Oz/ten-m homolog 2 (Drosophila) (Odz2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		mKIAA1127; D3Bwg1534e; Odz3; Ten-m2; 9330187F13Rik; 2610040L17Rik	mKIAA1127; D3Bwg1534e; Odz3; Ten-m2; 9330187F13Rik; 2610040L17Rik
Mus musculus	RefSeq	ILMN_216838	ILMN_216838	TNS4	NM_172564.2	NM_172564.2		217169	142382709	NM_172564.2	Tns4	NP_766152.1	ILMN_1236029	001260113	S	4683	GTTCTAGGCTGAATGGGAGAGTCCTCCACAACTCCCTGTGTGCCTCATGG	11	-	98927010-98927059	11qD	Mus musculus tensin 4 (Tns4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA589547; Cten; AU016405; 9930017A07Rik	AA589547; Cten; AU016405; 9930017A07Rik
Mus musculus	Riken	ILMN_203532	ILMN_203532	6030499N03RIK	ri|6030499N03|PX00058P13|AK031736|4196					AK031736	6030499N03Rik		ILMN_1247739	002900082	S	3861	GTGGTTGGCACCGATTTGCAGAAGTCCTGTGGGCAAGTCCTCATAGTTGC										
Mus musculus	RefSeq	ILMN_212126	ILMN_212126	REEP5	NM_007874.2	NM_007874.2		13476	31542567	NM_007874.2	Reep5	NP_031900.2	ILMN_2623046	000730541	S	2550	TGGGAAGGTCCTCCATCCACACCTGCAGAAAACAGCCAAGGCCTGTAAGG	18	-	34504889-34504938	18qB1	Mus musculus receptor accessory protein 5 (Reep5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TB2/DP1; AI324241; AU022809; Dp1; DP1/TB2; AW495741; R74856	TB2/DP1; AI324241; AU022809; Dp1; DP1/TB2; AW495741; R74856
Mus musculus	RefSeq	ILMN_210562	ILMN_210562	TH1L	NM_020580.3	NM_020580.3		57314	145301585	NM_020580.3	Th1l	NP_065605.2	ILMN_2606873	003890189	S	1980	CTTCTCAAAGGTAGCTTCTGTGGCAGACAGCCCCCCTGTGTCGCAGTGTG				2qH4	Mus musculus TH1-like homolog (Drosophila) (Th1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]		C77797; Th1; 2410003I03Rik	C77797; Th1; 2410003I03Rik
Mus musculus	RefSeq	ILMN_199623	ILMN_199623	LOC383751	XM_357224.1	XM_357224.1			38075301	XM_357224.1	LOC383751		ILMN_2535892	001740315	S	89	GCACTGAAGATCATCGACTCTTTGCCCTGCCAGGACCTGAATGTCTGCCT										
Mus musculus	RefSeq	ILMN_220806	ILMN_231336	PLA2G2A	NR_002926.3	NR_002926.3		18780	132626635	NR_002926.3	Pla2g2a		ILMN_2727163	005050524	S	481	AGAAGCCCAAATGCTGAAAAGAGCCATCTCCTGAAACACCCGGACATGCG	4	+	138385847-138385896	4qD3	Mus musculus phospholipase A2, group IIA (platelets, synovial fluid) (Pla2g2a), transcribed RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IGI]; Any process that modulates the frequency, rate or extent of epithelial cell proliferation [goid 50678] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]	sPLA2; Mom1; EF; sPla2-IIA; Pla2	sPLA2; Mom1; EF; sPla2-IIA; Pla2
Mus musculus	MEEBO	ILMN_216502	ILMN_216502	BC050078	scl40161.4_53	XM_110973.2			38091379	XM_110973.2	BC050078		ILMN_1220919	000840020	S	2760	TGCTATTGGAGTTTTATCAGTGTGTAGAATAAAGTGTTTCAGTTACCCAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_249668	ILMN_249668	PPAN	NM_145610.1	NM_145610.1		235036	21704227	NM_145610.1	Ppan	NP_663585.1	ILMN_2778530	001510347	S	1159	GGCAGTGGGGGCAGGTCAGCCTGAAGATGAAGAGGATGACGCTGAGTATT	9	+	20696109-20696158	9qA3	Mus musculus peter pan homolog (Drosophila) (Ppan), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process whereby external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time [goid 1560] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SSF1; A230087P06Rik	SSF1; A230087P06Rik
Mus musculus	Riken	ILMN_206969	ILMN_206969	4930571K11RIK	ri|4930571K11|PX00640L22|AK076952|452					AK076952	4930571K11Rik		ILMN_2584055	002850243	S	232	GAGGTTGCCTGGTCAGGAGAACAAGGCACGAAGAAGGATCCAAGCTTTGG										
Mus musculus	RefSeq	ILMN_220081	ILMN_220081	LAS1L	NM_152822.2	NM_152822.2		76130	71979674	NM_152822.2	Las1l	NP_690035.2	ILMN_1225876	001410411	S	1370	TGTTCAATTGCTCTGCCACCCTTGACTGGCCGCAGGTGATCGAGTCCTGC	X	-	93141790-93141839	XqC3	Mus musculus LAS1-like (S. cerevisiae) (Las1l), mRNA.				5830482G23Rik; 1810030A06Rik	5830482G23Rik; 1810030A06Rik
Mus musculus	RefSeq	ILMN_185700	ILMN_220081	LAS1L	NM_152822.2	NM_152822.2		76130	71979674	NM_152822.2	Las1l	NP_690035.2	ILMN_1228498	005870504	S	2500	ATTCAGCTTTTTACCACAATGGAAATCTGAATGATTTTTCCCCCGTTTTC	X	-	93130700-93130749	XqC3	Mus musculus LAS1-like (S. cerevisiae) (Las1l), mRNA.				5830482G23Rik; 1810030A06Rik	5830482G23Rik; 1810030A06Rik
Mus musculus	Riken	ILMN_204701	ILMN_204701	A430071O12RIK	ri|A430071O12|PX00137D15|AK040168|4071					AK040168	A430071O12Rik		ILMN_2566979	003710768	S	3456	GTTTTACTGTAGAGCCAGGCTACCTCAGTTTAGTTTCCATCTCTTCTACC										
Mus musculus	RefSeq	ILMN_223380	ILMN_312972	C330048F19	XM_001474131.1	XM_001474131.1		328747	149268956	XM_001474131.1	C330048F19	XP_001474181.1	ILMN_1242351	005420239	S	1091	CACAGCCAGAAAGGTGCCAACTTTTGTGTCGTGCTATCAGAATGGAATGT				17qA2	PREDICTED: Mus musculus hypothetical protein C330048F19 (C330048F19), mRNA.					
Mus musculus	RefSeq	ILMN_213613	ILMN_213613	MORN2	NM_194269.1	NM_194269.1		378462	34850747	NM_194269.1	Morn2	NP_919245.1	ILMN_1219786	002900021	S	317	TTCGGGCGCTGTGTATGAAGGACAGTTTAAGGACAACATGTTTCATGGAC	17	+	80694882-80694931	17qE3	Mus musculus MORN repeat containing 2 (Morn2), mRNA.				Mopt; MGC107136	Mopt; MGC107136
Mus musculus	RefSeq	ILMN_217082	ILMN_217082	GK5	NM_177352.2	NM_177352.2		235533	31340669	NM_177352.2	Gk5	NP_796326.1	ILMN_2834555	001470053	S	2588	GCCAAAGCCACGTTTGCTCCCCACAGAACTTAACACTGTGCCTTCCTGTC	9	+	95992147-95992196	9qE3.3	Mus musculus glycerol kinase 5 (putative) (Gk5), mRNA.		The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + glycerol = ADP + glycerol 3-phosphate [goid 4370] [evidence IEA]	G630067D24Rik; C330018K18Rik; AV095337	G630067D24Rik; C330018K18Rik; AV095337
Mus musculus	MEEBO	ILMN_191287	ILMN_191287	1700058C01RIK	scl42233.7_190				31340818	NM_175198	1700058C01Rik		ILMN_2518452	006860370	S	15	CCTGGGTTCTGCAGCCCAAGACTACCCTGTTCCCTAGTGAAACACCATCC										
Mus musculus	Riken	ILMN_204045	ILMN_204045	SRR	ri|A830036H21|PX00155G21|AK043819|1165					AK043819	Srr		ILMN_1227814	001300196	S	822	ACTTCAAACATCCTTTTAAAAATACCTTGCCGGGCGTGGTGGCGCACGCC							The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine [goid 9069] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the synthesis of free D-serine from L-serine [goid 30378] [evidence IDA]; Catalysis of the reaction: L-threonine = D-threonine [goid 18114] [evidence IDA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217740	ILMN_217740	KRT12	NM_010661.2	NM_010661.2		268482	118130980	NM_010661.2	Krt12	NP_034791.2	ILMN_2865527	000510484	S	1697	GCAACCCCAGATCACCTTACACCTTCCTGGGCCTGAAGAAGTCTTTCCAC	11	-	99277085-99277134	11qD	Mus musculus keratin 12 (Krt12), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	A830036E02; AI835216; K12; Krt12; Krt1-12; E130011P14	A830036E02; AI835216; K12; Krt12; Krt1-12; E130011P14
Mus musculus	RefSeq	ILMN_209385	ILMN_209385	HNRPM	NM_029804.1	NM_029804.1		76936	21313307	NM_029804.1	Hnrpm	NP_084080.1	ILMN_2921103	001030484	S	2355	TAATGATTGGGGTTCCATTTGACTGTTTGCATTGAGATTGCAATGTGCGC	17	-	33252993-33253042	17qB1	Mus musculus heterogeneous nuclear ribonucleoprotein M (Hnrpm), mRNA.				mKIAA4193; 2610023M21Rik; KIAA4193; AA409009	mKIAA4193; 2610023M21Rik; KIAA4193; AA409009
Mus musculus	RefSeq	ILMN_209385	ILMN_209385	HNRPM	NM_029804.1	NM_029804.1		76936	21313307	NM_029804.1	Hnrpm	NP_084080.1	ILMN_2921095	006840754	S	2122	GTCTCCAGAGGTGGCTGAGAGAGCCTGCCGGATGATGAATGGCATGAAGC	17	-	33253226-33253275	17qB1	Mus musculus heterogeneous nuclear ribonucleoprotein M (Hnrpm), mRNA.				mKIAA4193; 2610023M21Rik; KIAA4193; AA409009	mKIAA4193; 2610023M21Rik; KIAA4193; AA409009
Mus musculus	Riken	ILMN_205153	ILMN_205153	GLRA3	ri|A230050P16|PX00128E04|AK038618|3586					AK038618	Glra3		ILMN_1254910	001850279	S	3413	GTATTTTTGCTGCTGCTAATGTGGTTCCATGGGACAGGGCTTGCCTGCCG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185439	ILMN_240058	CD320	NM_019421.3	NM_019421.3		54219	88853587	NM_019421.3	Cd320	NP_062294.3	ILMN_1235750	005420008	S	834	CTGTCAGAAAGGAAAACCTCTCTGATCTGAGGACACATGGTTACCACCTG	17	+	33984619-33984668	17qB1	Mus musculus CD320 antigen (Cd320), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	NG29; 8D6; 425O18-1; VLDL; D17Ertd716e	NG29; 8D6; 425O18-1; VLDL; D17Ertd716e
Mus musculus	RefSeq	ILMN_221115	ILMN_221115	2610301B20RIK	NM_026005.2	NM_026005.2		67157	42475982	NM_026005.2	2610301B20Rik	NP_080281.2	ILMN_2731228	002940332	S	1640	GTGTGTGACACTGGGCACTCTGAAAGGAAGTACATTTTAGCCCAGATATG	4	+	10826202-10826251	4qA1	Mus musculus RIKEN cDNA 2610301B20 gene (2610301B20Rik), mRNA.				AI428449	AI428449
Mus musculus	MEEBO	ILMN_223494	ILMN_223494	DXBWG1396E	scl53716.6_16	NM_029836.1			33859737	NM_029836.1	DXBwg1396e		ILMN_1216663	004880470	S	2612	CCAGAAGCCCCGCCCCTTTCCCCGTGACCCTCAACGAGCCTAATAAAACT										
Mus musculus	RefSeq	ILMN_210678	ILMN_210678	OLFR1121	NM_146348.1	NM_146348.1		258345	22129605	NM_146348.1	Olfr1121	NP_666460.1	ILMN_1248317	000770747	S	775	GCCCCTGCATCTATTACCTACTTAATGCCAAAATCATCTCATTCTGCAGT	2	+	87212465-87212514	2qD	Mus musculus olfactory receptor 1121 (Olfr1121), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR264-18	MOR264-18
Mus musculus	RefSeq	ILMN_196841	ILMN_196841	LOC208177	XM_156187.1	XM_156187.1			20894336	XM_156187.1	LOC208177		ILMN_2525988	007100554	S	214	AGGCCTGTGGTTATGGATTCCTGGGTGTCAAGTGACCTTCCTGATCCTCA										
Mus musculus	MEEBO	ILMN_184445	ILMN_184445	IGHV7S2_J00500_IG_HEAVY_VARIABLE_7S2_59	IGHV7S2_J00500_Ig_heavy_variable_7S2_59						IGHV7S2_J00500_Ig_heavy_variable_7S2_59		ILMN_1232666	002340703	S	20	GCATCTTCTGGGTTCACCTTCACTGATTACTACATGAACTGGGTCCACCG										
Mus musculus	RefSeq	ILMN_249343	ILMN_249343	CASKIN1	NM_027937.1	NM_027937.1		268932	46592862	NM_027937.1	Caskin1	NP_082213.1	ILMN_2874454	001990767	S	5911	TGATGGTCCCAAGAAGCTGTCTCCACAACCACAGTCTGTGCAGCTTTTAT	17	+	24645766-24645815	17qA3.3	Mus musculus CASK interacting protein 1 (Caskin1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			mKIAA1306; C630036E02Rik; 3300002N10Rik; C130061I24	mKIAA1306; C630036E02Rik; 3300002N10Rik; C130061I24
Mus musculus	RefSeq	ILMN_184908	ILMN_249343	CASKIN1	NM_027937.1	NM_027937.1		268932	46592862	NM_027937.1	Caskin1	NP_082213.1	ILMN_1220811	007040154	S	5436	GAGACGAACTACACAACATAGCCTCAGACCATGAGCAGAACATCCATGGG	17	+	24645291-24645340	17qA3.3	Mus musculus CASK interacting protein 1 (Caskin1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			mKIAA1306; C630036E02Rik; 3300002N10Rik; C130061I24	mKIAA1306; C630036E02Rik; 3300002N10Rik; C130061I24
Mus musculus	RefSeq	ILMN_212077	ILMN_249343	CASKIN1	NM_027937.1	NM_027937.1		268932	46592862	NM_027937.1	Caskin1	NP_082213.1	ILMN_2622446	005260685	S	5387	CCCATGGATGTTCTGCTCATGGTCTGAGGCTATGTTGTGTAGTTCGTCTC	17	+	24645242-24645291	17qA3.3	Mus musculus CASK interacting protein 1 (Caskin1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			mKIAA1306; C630036E02Rik; 3300002N10Rik; C130061I24	mKIAA1306; C630036E02Rik; 3300002N10Rik; C130061I24
Mus musculus	RefSeq	ILMN_212077	ILMN_249343	CASKIN1	NM_027937.1	NM_027937.1		268932	46592862	NM_027937.1	Caskin1	NP_082213.1	ILMN_1231762	003450253	S	5611	GCAGCTGTCACTCCTGGCGCTTCCTCATCTGAACATGCTGACCGCTCATC	17	+	24645466-24645515	17qA3.3	Mus musculus CASK interacting protein 1 (Caskin1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			mKIAA1306; C630036E02Rik; 3300002N10Rik; C130061I24	mKIAA1306; C630036E02Rik; 3300002N10Rik; C130061I24
Mus musculus	RefSeq	ILMN_197273	ILMN_197273	LOC228107	XM_141015.3	XM_141015.3			38074929	XM_141015.3	LOC228107		ILMN_2527542	001660437	S	1257	AAAGCTGCCTCTGACAGCCAGTGGAGATCTAACTGCCATCGCCCTCATGA										
Mus musculus	RefSeq	ILMN_187098	ILMN_229290	RNF170	NM_029965.2	NM_029965.2		77733	111186462	NM_029965.2	Rnf170	NP_084241.1	ILMN_2674952	003120343	S	691	CTGGCGATACGGGTCCTGGCTTGGTGCAATCAGTTGTCCTATCTGTAGAC	8	+	27246120-27246169	8qA2	Mus musculus ring finger protein 170 (Rnf170), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC118197; 6720407G21Rik	MGC118197; 6720407G21Rik
Mus musculus	RefSeq	ILMN_229290	ILMN_229290	RNF170	NM_029965.2	NM_029965.2		77733	111186462	NM_029965.2	Rnf170	NP_084241.1	ILMN_2970742	001400332	S	438	TGGTGGTCAGCTTGGCGTTGACCGCTACTCTCCTGTATGCACTTCTCAGA	8	+	27234411-27234459:27236376-27236376	8qA2	Mus musculus ring finger protein 170 (Rnf170), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC118197; 6720407G21Rik	MGC118197; 6720407G21Rik
Mus musculus	RefSeq	ILMN_209315	ILMN_209315	LRRC48	NM_029044.1	NM_029044.1		74665	21312843	NM_029044.1	Lrrc48	NP_083320.1	ILMN_3071876	004780332	I	1801	TTTCGTTCACCCCTCTCTCAACACTGTTGGTAATAATTCTCAATATAGAG	11	+	60210471-60210520	11qB2	Mus musculus leucine rich repeat containing 48 (Lrrc48), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-135F6.3; 4930449E07Rik	RP23-135F6.3; 4930449E07Rik
Mus musculus	RefSeq	ILMN_200039	ILMN_200039	LOC381637	XM_355600.1	XM_355600.1			38079975	XM_355600.1	LOC381637		ILMN_1252109	004670070	S	395	CCATAGTGCAGCGAGTGTAGCCGAGCCTCCTGGAACCCACAAATCTCTCC										
Mus musculus	MEEBO	ILMN_210968	ILMN_210968	KCMF1	scl28851.8_90	NM_019715.1			9789926	NM_019715.1	Kcmf1		ILMN_2611155	000730377	S	3089	TTTGATGGAAATCTTCTGAAGGAACCGCCCTCGCTGGGCTCCTGGTACAC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISO]		
Mus musculus	RefSeq	ILMN_194431	ILMN_233944	HDGFRP3	NM_013886.4	NM_013886.4		29877	84794635	NM_013886.4	Hdgfrp3	NP_038914.2	ILMN_2733269	003850767	S	3146	ACAAGTGTTCATTAAGGCAACTAATAAAGTTGATTTGTGTCATCTTAGCT	7	-	89028814-89028863	7qD3	Mus musculus hepatoma-derived growth factor, related protein 3 (Hdgfrp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HRP-3; 2700022B06Rik	HRP-3; 2700022B06Rik
Mus musculus	RefSeq	ILMN_187696	ILMN_233944	HDGFRP3	NM_013886.4	NM_013886.4		29877	84794635	NM_013886.4	Hdgfrp3	NP_038914.2	ILMN_1248441	006270487	S	3182	CAAATCAACTTTATTAGTTGCCTTAATGAACACTTGTTTTATTGGTTGAT	7	-	89028778-89028827	7qD3	Mus musculus hepatoma-derived growth factor, related protein 3 (Hdgfrp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HRP-3; 2700022B06Rik	HRP-3; 2700022B06Rik
Mus musculus	RefSeq	ILMN_201159	ILMN_201159	LOC385030	XM_358003.1	XM_358003.1			38089536	XM_358003.1	LOC385030		ILMN_1249495	005420521	S	136	GGTAAACATAGTGATGGAAGCACTCTGAAATCTCTCAGTGTGACAGAAGG										
Mus musculus	RefSeq	ILMN_210841	ILMN_257775	PLA2G10	NM_011987.2	NM_011987.2		26565	118129973	NM_011987.2	Pla2g10	NP_036117.1	ILMN_2609753	005870136	S	870	AATTCAGCCTTTATGAGAAGCTGTACTATCTTGTACCTGCTGCAGGGCTG	16	-	13715257-13715306	16qA1	Mus musculus phospholipase A2, group X (Pla2g10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence ISO]; The directed movement of phospholipids into, out of, within or between cells. A lysophospholipid is a phospholipid that lacks one of its fatty acyl chains; it is an intermediate formed during digestion of dietary and biliary phospholipids [goid 51977] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]	mGXsPLA2; PLA2GX; sPLA2-X	mGXsPLA2; PLA2GX; sPLA2-X
Mus musculus	RefSeq	ILMN_201090	ILMN_201090	LOC381998	XM_356058.1	XM_356058.1			38089060	XM_356058.1	LOC381998		ILMN_1214259	004850386	S	820	GAGGCTTTCGGACATTTCTGTTTTTCCCAAGGGAGGTGTGAGTCCCGGTC										
Mus musculus	RefSeq	ILMN_198715	ILMN_225305	LOC245693	XM_913062.1	XM_913062.1		245693	83004936	XM_913062.1	LOC245693	XP_918155.1	ILMN_1246739	002490450	S	1146	GCCTCATGCACCAGTCAATACCAAAAGCTGCAAGCCAACCTGGTCCGGCC					PREDICTED: Mus musculus similar to Protein C9orf138 (LOC245693), mRNA.					
Mus musculus	RefSeq	ILMN_193517	ILMN_261831	DPP6	NM_010075.1	NM_010075.1		13483	24429567	NM_010075.1	Dpp6	NP_034205.1	ILMN_1214188	001660750	S	3608	ATGCCAGGCCTCTCTCTGTTGTTAGAAAAGCCTCCACTGTCCCTAACTGC	5	+	28052782-28052831	5qB1	Mus musculus dipeptidylpeptidase 6 (Dpp6), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	D5Buc5; In(5)6H-p; D5Buc3; MGC113720; Rw; Peplb; D5Buc4; Dpp-6	D5Buc5; In(5)6H-p; D5Buc3; MGC113720; Rw; Peplb; D5Buc4; Dpp-6
Mus musculus	RefSeq	ILMN_200532	ILMN_261831	DPP6	NM_010075.1	NM_010075.1		13483	24429567	NM_010075.1	Dpp6	NP_034205.1	ILMN_2539093	003180725	S	2372	CTTCACCGACACAGCTCACTACCCCTTATTGCTCGTGGTGGATGGTACCC	5	+	28039187-28039217:28040912-28040930	5qB1	Mus musculus dipeptidylpeptidase 6 (Dpp6), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	D5Buc5; In(5)6H-p; D5Buc3; MGC113720; Rw; Peplb; D5Buc4; Dpp-6	D5Buc5; In(5)6H-p; D5Buc3; MGC113720; Rw; Peplb; D5Buc4; Dpp-6
Mus musculus	RefSeq	ILMN_212122	ILMN_212122	CCR9	NM_009913.4	NM_009913.4		12769	145966771	NM_009913.4	Ccr9	NP_034043.1	ILMN_2623009	004920241	S	2360	ACAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGC				9qF4	Mus musculus chemokine (C-C motif) receptor 9 (Ccr9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IDA]	GPR-9-6; Cmkbr10	GPR-9-6; Cmkbr10
Mus musculus	MEEBO	ILMN_187767	ILMN_187767	C030025P15RIK	scl27347.1.1_178				31343251	NM_177287	C030025P15Rik		ILMN_2710286	006130095	S	1005	GAACGGTAAACATTTGGCTACGATGTCACCCTGGGTAAGACAGGGCCATC										
Mus musculus	MEEBO	ILMN_187767	ILMN_187767	C030025P15RIK	scl27347.1.1_178				31343251	NM_177287	C030025P15Rik		ILMN_1234749	006180504	S	1	GACCACCGGGACGCCAGCAGGAAATAATCGTAACCCGAAATCGCAGTCAA										
Mus musculus	RefSeq	ILMN_216260	ILMN_216260	MAD2L1BP	NM_025649.1	NM_025649.1		66591	13385109	NM_025649.1	Mad2l1bp	NP_079925.1	ILMN_2815222	002070189	S	1134	TGGAGGTGGTCCTTCCCCGCTTCATGCTATGGATTTTCAGAACTGTTATC	17	-	45611039-45611088	17qC	Mus musculus MAD2L1 binding protein (Mad2l1bp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence ISO]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mad2lbp; AU018945; 0610009D16Rik; mKIAA0110; CMT2B; CMT2A; KIAA0110; AW550977; 2510031P20Rik; C76045	Mad2lbp; AU018945; 0610009D16Rik; mKIAA0110; CMT2B; CMT2A; KIAA0110; AW550977; 2510031P20Rik; C76045
Mus musculus	RefSeq	ILMN_220335	ILMN_220335	SLC6A20B	NM_011731.2	NM_011731.2		22599	31981420	NM_011731.2	Slc6a20b	NP_035861.2	ILMN_2720751	007160743	S	2093	GGGAGGTCTACAGCTGCTTTTTAAAGCCACAAGTATTTTCTGCTTCCTGA	9	-	123503993-123504042	9qF4	Mus musculus solute carrier family 6 (neurotransmitter transporter), member 20B (Slc6a20b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence TAS]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence TAS]	XT3; Xtrp3; AA986306; Sit1	XT3; Xtrp3; AA986306; Sit1
Mus musculus	RefSeq	ILMN_198264	ILMN_198264	LOC381134	XM_355051.1	XM_355051.1			38083443	XM_355051.1	LOC381134		ILMN_2531060	004590402	S	190	CTAGGAAGCACCAGCCTAGACCATGCCCTTGAAGAGACTTACCAGCTATT										
Mus musculus	RefSeq	ILMN_218909	ILMN_218909	ATMIN	NM_177700.3	NM_177700.3		234776	40254326	NM_177700.3	Atmin	NP_808368.2	ILMN_3146362	002510376	A	4574	GGACTCGTCCACTGCCTTAACGCTCAAGCATCTATTTAAGCCCTCCGGCT	8	+	119484057-119484106	8qE1	Mus musculus ATM interactor (Atmin), mRNA.				mKIAA0431; MGC79206	mKIAA0431; MGC79206
Mus musculus	RefSeq	ILMN_218909	ILMN_218909	ATMIN	NM_177700.3	NM_177700.3		234776	40254326	NM_177700.3	Atmin	NP_808368.2	ILMN_2701824	004050360	S	4618	CCGGCTGAAGGAGAAGTGCATGTCTGCTCGTGGCTCTTTGTAAATATAAG	8	+	119484101-119484150	8qE1	Mus musculus ATM interactor (Atmin), mRNA.				mKIAA0431; MGC79206	mKIAA0431; MGC79206
Mus musculus	RefSeq	ILMN_218909	ILMN_218909	ATMIN	NM_177700.3	NM_177700.3		234776	40254326	NM_177700.3	Atmin	NP_808368.2	ILMN_3068179	007330682	I	45	CCGATTCTGCGGGTCCGGCCCCGGGTGTCCCGGCCACGCCGGCGAGCACG	8	+	119467352-119467401	8qE1	Mus musculus ATM interactor (Atmin), mRNA.				mKIAA0431; MGC79206	mKIAA0431; MGC79206
Mus musculus	Riken	ILMN_203423	ILMN_203423	SNTG1	ri|B230220O13|PX00070I09|AK045676|3497					AK045676	Sntg1		ILMN_1220674	002140608	S	3163	GGGTTTGAACCCACAGAAATTTGCGTGCCTCTGCCTCCTGAATGCTGGAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	Riken	ILMN_205607	ILMN_205607	B930075B08RIK	ri|B930075B08|PX00166C10|AK047481|1926					AK047481	B930075B08Rik		ILMN_2573860	004060368	S	1783	ATCCCAGGATGGAGAAGCACCCGCTGTGTGGGGAGCTAAGATGCTTCTAT										
Mus musculus	RefSeq	ILMN_203715	ILMN_224632	A830010M20RIK	XM_982745.1	XM_982745.1		231570	94375208	XM_982745.1	A830010M20Rik	XP_987839.1	ILMN_1238290	003830692	S	5785	GTGGCCATAAGAATGAAAAGGTCCTACAGCCTACTCGTGAGGTAGAATGC					PREDICTED: Mus musculus RIKEN cDNA A830010M20 gene, transcript variant 2 (A830010M20Rik), mRNA.					
Mus musculus	Riken	ILMN_203589	ILMN_203589	6030405B10RIK	ri|6030405B10|PX00056D11|AK031307|4374					AK031307	6030405B10Rik		ILMN_2558455	006180689	S	2577	CGGAAGAACATAAAGATCCATAAAGACGCAGAATCCGCCCAGTCGTGCAC										
Mus musculus	RefSeq	ILMN_221957	ILMN_253733	TMEM55B	NM_001033271.3	NM_001033271.3		219024	146198580	NM_001033271.3	Tmem55b	NP_001028443.1	ILMN_2776952	006550382	S	2195	GCCTCTTGTGCTATGTGGGGATCTCAATGTGGCTCATGAAGAAATTGACC				14qC1	Mus musculus transmembrane protein 55b (Tmem55b), mRNA. XM_919952 XM_919965	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	BC039161; MGC118137	BC039161; MGC118137
Mus musculus	RefSeq	ILMN_214529	ILMN_253733	TMEM55B	NM_001033271.3	NM_001033271.3		219024	146198580	NM_001033271.3	Tmem55b	NP_001028443.1	ILMN_1216624	005570164	S	1444	AACTATTTAATATGGGATATGTTCCCCTAATCCTGTACTTCCCTGAATTC				14qC1	Mus musculus transmembrane protein 55b (Tmem55b), mRNA. XM_919952 XM_919965	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	BC039161; MGC118137	BC039161; MGC118137
Mus musculus	RefSeq	ILMN_206926	ILMN_323762	TCF4	NM_001083967.1	NM_001083967.1		21413	145386521	NM_001083967.1	Tcf4	NP_001077436.1	ILMN_1214146	000650341	S	1853	GGATATCAAATCAATTACTAGCAATAACGATGATGAGGACCTGACCCCAG				18qE2	Mus musculus transcription factor 4 (Tcf4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	SEF2; ITF2; SEF-2; Tcf-4; ASP-I2; ITF-2; MITF-2B; E2.2; Hnf-4; TFE; ME2; ITF-2b; MITF-2A; SEF2-1; 5730422P05Rik; E2-2	SEF2; ITF2; SEF-2; Tcf-4; ASP-I2; ITF-2; MITF-2B; E2.2; Hnf-4; TFE; ME2; ITF-2b; MITF-2A; SEF2-1; 5730422P05Rik; E2-2
Mus musculus	MEEBO	ILMN_185385	ILMN_185385	IGKV3-2_X16954_IG_KAPPA_VARIABLE_3-2_18	IGKV3-2_X16954_Ig_kappa_variable_3-2_18						IGKV3-2_X16954_Ig_kappa_variable_3-2_18		ILMN_1251011	004040079	S	12	CCTGCTTCTCTGGGTTCCAGGTGGTTCCACAGGTGACATTGTGCTGACCC										
Mus musculus	RefSeq	ILMN_213496	ILMN_213496	IL33	NM_133775.1	NM_133775.1		77125	19526999	NM_133775.1	Il33	NP_598536.1	ILMN_1259747	003440767	S	2245	CAATAGCTGGAGGAATGTATGATCAAAGAGGCCGGGAACCGCCGTGTAGG	19	+	30034954-30035003	19qC1	Mus musculus interleukin 33 (Il33), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IPI]	Il-33; NF-HEV; Il1f11; 9230117N10Rik	Il-33; NF-HEV; Il1f11; 9230117N10Rik
Mus musculus	RefSeq	ILMN_197513	ILMN_197513	LOC277139	XM_204827.3	XM_204827.3			38076380	XM_204827.3	LOC277139		ILMN_2528397	003440564	S	6998	CTTTCAGCTCCATCTTCTTCCCCACAGACAGAGGGCATCACTACCCTACG										
Mus musculus	RefSeq	ILMN_228904	ILMN_228904	MRPS22	NM_025485.1	NM_025485.1		64655	13384903	NM_025485.1	Mrps22	NP_079761.1	ILMN_2787396	007050128	S	914	GTCCAGCTGTACCACATGCTCCATCCAGATGGCCAGTCAGCTCAAGAGGC	9	-	98399422-98399471	9qE3.3	Mus musculus mitochondrial ribosomal protein S22 (Mrps22), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISO]		The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISO]	Rpms22; 3100002P07Rik	Rpms22; 3100002P07Rik
Mus musculus	RefSeq	ILMN_199136	ILMN_254618	SLC47A2	NM_001033542.2	NM_001033542.2		380701	141802846	NM_001033542.2	Slc47a2	NP_001028714.1	ILMN_1242117	000510296	S	1735	GGCTCTGACTGTTTCTGTTGCTGTCCTCATAGCAGGGATTGTGGTGCGAG	11	-	61115725-61115774	11qB2	Mus musculus solute carrier family 47, member 2 (Slc47a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of drugs into, out of, within or between cells [goid 6855] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Enables the directed movement of a drug into, out of, within or between cells. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 15238] [evidence IEA]	4933429E10Rik	4933429E10Rik
Mus musculus	MEEBO	ILMN_188350	ILMN_188350	SCL0003835.1_21	scl0003835.1_21	AK010240.1			12845537	AK010240.1	scl0003835.1_21		ILMN_2451942	002140224	S	10	TCCTCATTTCCAACCAACTATCACCGAGCCCATCTGGCCGTGCAGCCCTC										
Mus musculus	RefSeq	ILMN_216933	ILMN_216933	ACRV1	NM_007391.2	NM_007391.2		11451	114326405	NM_007391.2	Acrv1	NP_031417.2	ILMN_2834622	004480441	S	842	TGTGCTGTCGGAATGAACCTCTCTGCAACAAGGTCTAGATGCCCGTGCCC	9	+	36506169-36506205:36506206-36506218	9qA4	Mus musculus acrosomal vesicle protein 1 (Acrv1), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]			Msa63	Msa63
Mus musculus	MEEBO	ILMN_191689	ILMN_191689	ES2EL	scl48693.10_69				11875214	NM_022408	Es2el		ILMN_1218452	003290026	S	6	AGGGCAGCCTTAAGCACACCAGACTTTTCTGACACCTGGGTCTTGCTTTG										
Mus musculus	MEEBO	ILMN_191689	ILMN_191689	ES2EL	scl48693.10_69				11875214	NM_022408	Es2el		ILMN_2759475	004860288	S	1	GAATTCGTGGCAGACGCCGCCCGAGCGATTCTGGGATAGCGATGGGGACG										
Mus musculus	MEEBO	ILMN_194643	ILMN_194643	MJ-5000-155_2934	MJ-5000-155_2934						MJ-5000-155_2934		ILMN_2508253	004150291	S	6	GGTATGTTGGAATGACTGTTAGTGAGGTTAAGGGTAGGGGAGTTCAAGGT										
Mus musculus	MEEBO	ILMN_187120	ILMN_187120	ZFP260	scl32827.4_67				52345428	NM_011981	Zfp260		ILMN_2441326	001070598	S	2	GTGTGTGCATCCCAAGGCCCCTCATGGATATCTGAAGCCTTGTGTAGTAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197304	ILMN_197304	LOC268700	XM_193742.2	XM_193742.2			38075066	XM_193742.2	LOC268700		ILMN_2527650	001240500	S	353	AGTGGCAGACCATGATTGAAGCTCACGTTGATGTCAAGACGACCGATGGG										
Mus musculus	RefSeq	ILMN_234403	ILMN_234403	FBXL21	NM_178674.3	NM_178674.3		213311	83776546	NM_178674.3	Fbxl21	NP_848789.2	ILMN_2943738	003440554	S	1500	GAGACTCTGTGGCAGAAGGCTCACCCAGCTGTCTATCATGGAGGAAGTTC	13	+	56546943-56546992	13qB1	Mus musculus F-box and leucine-rich repeat protein 21 (Fbxl21), mRNA. XM_915729 XM_923901 XM_923905 XM_923909 XM_923913		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		FBXL3B; FBL3B; D630045D17Rik	FBXL3B; FBL3B; D630045D17Rik
Mus musculus	RefSeq	ILMN_234403	ILMN_234403	FBXL21	NM_178674.3	NM_178674.3		213311	83776546	NM_178674.3	Fbxl21	NP_848789.2	ILMN_2943742	002470672	S	1149	CCCGGGGCAGATCAAGTTCCATTCTATTAAGAAACGCAGCTGGGACGCAC	13	+	56546592-56546641	13qB1	Mus musculus F-box and leucine-rich repeat protein 21 (Fbxl21), mRNA. XM_915729 XM_923901 XM_923905 XM_923909 XM_923913		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		FBXL3B; FBL3B; D630045D17Rik	FBXL3B; FBL3B; D630045D17Rik
Mus musculus	MEEBO	ILMN_189686	ILMN_189686	SCL0002023.1_27	scl0002023.1_27	AK047743.1			26338945	AK047743.1	scl0002023.1_27		ILMN_1212614	000070370	S	1	CTCGGCTCAGGAGCCACTCACATCTTTGATGATGTAGACAAGAGTGACTT										
Mus musculus	RefSeq	ILMN_200782	ILMN_200782	LOC385330	XM_358196.1	XM_358196.1			38086081	XM_358196.1	LOC385330		ILMN_1248046	005960240	S	3	GGCAAGCCCAAGCACTAAGGAGAAGCTCAAACTCTCATTTACAACTCAGA										
Mus musculus	RefSeq	ILMN_185143	ILMN_230846	GGT5	NM_011820.4	NM_011820.4		23887	146134403	NM_011820.4	Ggt5	NP_035950.2	ILMN_2698271	007040091	S	1708	TCTTGGTCAACAAAGGCCAGGGATCGAAGCTGGTGATCGGTGGGGCAGGT				10qC1	Mus musculus gamma-glutamyltransferase 5 (Ggt5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IDA]; Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IMP]	GGT-REL; AI551243; GGL; MGC132842	GGT-REL; AI551243; GGL; MGC132842
Mus musculus	RefSeq	ILMN_185143	ILMN_230846	GGT5	NM_011820.4	NM_011820.4		23887	146134403	NM_011820.4	Ggt5	NP_035950.2	ILMN_2761739	004570343	S	4019	CCTAAGACCTCCATGACAAGTTCTGTTCTTGAGAGATTATTTTTCCTAGT				10qC1	Mus musculus gamma-glutamyltransferase 5 (Ggt5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IDA]; Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IMP]	GGT-REL; AI551243; GGL; MGC132842	GGT-REL; AI551243; GGL; MGC132842
Mus musculus	RefSeq	ILMN_219798	ILMN_219798	SYT12	NM_134164.4	NM_134164.4		171180	146149200	NM_134164.4	Syt12	NP_598925.1	ILMN_1246560	007210273	S	2541	GGTCAGAGTTATTGAGGGGATCGCATCATACGTGAGGTGCTGGCTGTCAC				19qA	Mus musculus synaptotagmin XII (Syt12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185743	ILMN_322853	RC3H2	NM_001100591.1	NM_001100591.1		319817	155030208	NM_001100591.1	Rc3h2	NP_001094061.1	ILMN_2429629	006370431	S	6055	AAAAGGTTATGTAAACCAGTCTGTCTATTTCATGGATATTTAATAGTGAG				2qB	Mus musculus ring finger and CCCH-type zinc finger domains 2 (Rc3h2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mnab; 2900024N03Rik; Rnf164; D930043C02Rik; 9430019J22Rik	Mnab; 2900024N03Rik; Rnf164; D930043C02Rik; 9430019J22Rik
Mus musculus	RefSeq	ILMN_184377	ILMN_322853	RC3H2	NM_001100591.1	NM_001100591.1		319817	155030208	NM_001100591.1	Rc3h2	NP_001094061.1	ILMN_1250327	001090181	S	8758	GGAACAATGAGGGTTGTGATGATAGTGAATAGCAAAGAGTGAATTCTGTG				2qB	Mus musculus ring finger and CCCH-type zinc finger domains 2 (Rc3h2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mnab; 2900024N03Rik; Rnf164; D930043C02Rik; 9430019J22Rik	Mnab; 2900024N03Rik; Rnf164; D930043C02Rik; 9430019J22Rik
Mus musculus	RefSeq	ILMN_220517	ILMN_322853	RC3H2	NM_001100591.1	NM_001100591.1		319817	155030208	NM_001100591.1	Rc3h2	NP_001094061.1	ILMN_1251986	002900544	S	3627	CTGCCGGTAACATCTTGCTTTAGCCAGCCACGTCCAATGTCTATTAGCAG				2qB	Mus musculus ring finger and CCCH-type zinc finger domains 2 (Rc3h2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mnab; 2900024N03Rik; Rnf164; D930043C02Rik; 9430019J22Rik	Mnab; 2900024N03Rik; Rnf164; D930043C02Rik; 9430019J22Rik
Mus musculus	RefSeq	ILMN_200257	ILMN_200257	LOC386081	XM_359060.1	XM_359060.1			38081125	XM_359060.1	LOC386081		ILMN_1237290	004040102	S	148	ATTCGGAGCTCAGATGGACGGAATGACCATCCAGAGACTGCCCCACTTGG										
Mus musculus	RefSeq	ILMN_261137	ILMN_261137	1810027O10RIK	NM_026982.1	NM_026982.1		69186	110625729	NM_026982.1	1810027O10Rik	NP_081258.1	ILMN_2875089	004560148	S	358	GGGCTGGCTTGCCTTGGCTTTTTGAAGTCTCTTGTTTAAGCGCCCAGTCC	11	+	69652987-69653011:69653012-69653036	11qB3	Mus musculus RIKEN cDNA 1810027O10 gene (1810027O10Rik), mRNA. XM_109683 XM_909001	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]			RP23-422L16.23; 3110009M16Rik	RP23-422L16.23; 3110009M16Rik
Mus musculus	RefSeq	ILMN_239548	ILMN_239548	DDEF2	NM_001004364.1	NM_001004364.1		211914	52138527	NM_001004364.1	Ddef2	NP_001004364.1	ILMN_3046047	005310682	I	272	GCCCCGGTGTTGCAGCGATGCCGGACCAGATCTCCGTGTCGGAATTCGTG	12	+	21117888-21117904:21117905-21117937	12qA1.2	Mus musculus development and differentiation enhancing factor 2 (Ddef2), mRNA.				MGC90837; Gm1523; Gm592	MGC90837; Gm1523; Gm592
Mus musculus	RefSeq	ILMN_239548	ILMN_239548	DDEF2	NM_001004364.1	NM_001004364.1		211914	52138527	NM_001004364.1	Ddef2	NP_001004364.1	ILMN_3121578	004280288	A	4393	CCCACACGCATCTGTATCATCGGTCTTAGGTACCTGGTGCCAGCTCTCTG	12	+	21275375-21275424	12qA1.2	Mus musculus development and differentiation enhancing factor 2 (Ddef2), mRNA.				MGC90837; Gm1523; Gm592	MGC90837; Gm1523; Gm592
Mus musculus	MEEBO	ILMN_185292	ILMN_185292	IGF2AS	scl0111975.10_26						Igf2as		ILMN_2425810	000610187	S	4	CGCCCACTTCCAGCCCCCTCCAAATTTGGGAAATGATATGCCAGTAAAGT										
Mus musculus	RefSeq	ILMN_188145	ILMN_252415	RAP2B	NM_028712.4	NM_028712.4		74012	113866002	NM_028712.4	Rap2b	NP_082988.1	ILMN_1254179	002710189	S	2057	AATACAAAGACTTCGTAAATGTGATTCAGGGCGCCCAGCACCCCTGTGTC	3	+	61170485-61170534	3qE1	Mus musculus RAP2B, member of RAS oncogene family (Rap2b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]	4021402C18Rik; AA408554	4021402C18Rik; AA408554
Mus musculus	RefSeq	ILMN_223267	ILMN_223267	SAMD4B	NM_175021.2	NM_175021.2		233033	142375565	NM_175021.2	Samd4b	NP_778186.1	ILMN_2761662	005870382	S	3307	CTATATCATAACCCAGAGGTGCAGCCCAGCCTGAGTCACATAAACCCTCT	7	-	29187986-29188035	7qA3	Mus musculus sterile alpha motif domain containing 4B (Samd4b), mRNA.				MGC30302; BC042901	MGC30302; BC042901
Mus musculus	Riken	ILMN_204393	ILMN_204393	9930031C04RIK	ri|9930031C04|PX00120M14|AK036964|2357					AK036964	9930031C04Rik		ILMN_2564635	006960288	S	1169	CAGGGCAGAGCAGGTAGAAAGGGAAAGGGACAGGGAGATGACTGGGATTG										
Mus musculus	Riken	ILMN_201921	ILMN_201921	NCAM	ri|4933436I09|PX00021M14|AK017085|1251					AK017085	Ncam		ILMN_1224833	002350603	S	863	TGCTGTCTTAGGTGCTGAAGGCATAGGTGTAAGCCCAGCGAGCAGAGGCC										
Mus musculus	RefSeq	ILMN_211909	ILMN_211909	ZPBP2	NM_027061.1	NM_027061.1		69376	40786388	NM_027061.1	Zpbp2	NP_081337.1	ILMN_2757924	001300470	S	1187	ACCTCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGTCCGCACTC	11	+	98419702-98419751	11qD	Mus musculus zona pellucida binding protein 2 (Zpbp2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107119; ZPBPL; 2610022C02Rik; 1700017D11Rik	MGC107119; ZPBPL; 2610022C02Rik; 1700017D11Rik
Mus musculus	RefSeq	ILMN_211909	ILMN_211909	ZPBP2	NM_027061.1	NM_027061.1		69376	40786388	NM_027061.1	Zpbp2	NP_081337.1	ILMN_2757923	003850292	S	1185	GTACCTCGGGAAAGTAAGATCAGTAAGGGCAAAGCTTTGGAAGTCCGCAC	11	+	98419700-98419749	11qD	Mus musculus zona pellucida binding protein 2 (Zpbp2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107119; ZPBPL; 2610022C02Rik; 1700017D11Rik	MGC107119; ZPBPL; 2610022C02Rik; 1700017D11Rik
Mus musculus	RefSeq	ILMN_193618	ILMN_243457	BASP1	NM_027395.1	NM_027395.1		70350	45598371	NM_027395.1	Basp1	NP_081671.1	ILMN_2611812	001940402	S	359	AGGCCCCCAAGGCCGGCGAAGCGAGCGCCGAGAGCACGGGCGCGGCCGAC	15	-	25294256-25294305	15qB1	Mus musculus brain abundant, membrane attached signal protein 1 (Basp1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			CAP-23; 2610024P12Rik; NAP22; CAP23; Ckap3; NAP-22	CAP-23; 2610024P12Rik; NAP22; CAP23; Ckap3; NAP-22
Mus musculus	RefSeq	ILMN_213737	ILMN_249504	TMEM123	NM_133739.1	NM_133739.1		71929	19526937	NM_133739.1	Tmem123	NP_598500.1	ILMN_1226867	002120240	S	2679	AACATATTTTATGGTGTGGTAATTTTGTATCTTGAGAAAGACTAAAGCAA	9	+	7794192-7794241	9qA1	Mus musculus transmembrane protein 123 (Tmem123), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC102366; 2310075C12Rik	MGC102366; 2310075C12Rik
Mus musculus	RefSeq	ILMN_215286	ILMN_237448	SEC61G	NM_011343.2	NM_011343.2		20335	31981498	NM_011343.2	Sec61g	NP_035473.1	ILMN_2657628	004540129	S	198	GCTATCATGGGATTCATTGGCTTCTTCGTGAAACTGATCCATATACCCAT	11	-	16404744-16404793	11qA2	Mus musculus SEC61, gamma subunit (Sec61g), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]	Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213462	ILMN_240799	MX1	NM_010846.1	NM_010846.1		17857	6996929	NM_010846.1	Mx1	NP_034976.1	ILMN_2707870	003290292	S	1807	AATAACTCTCAGTTTCCTCAAAAGGGGTTGACTACCACTGAGATGACCCA	16	-	97552928-97552977	16qC4	Mus musculus myxovirus (influenza virus) resistance 1 (Mx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence TAS]	AI893580; Mx-1; Mx	AI893580; Mx-1; Mx
Mus musculus	MEEBO	ILMN_188735	ILMN_188735	DACT2	scl50294.5_202				31982103	NM_172826	Dact2		ILMN_2455276	003840139	S	16	CCATGTGATGAGCCGGGGGAGGGTGGTATCAACCTGCTATTGCGCTTAGT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_224021	ILMN_224021	1200016C12RIK	scl0101533.6_235				39841068	NM_028660	1200016C12Rik		ILMN_2773298	004070484	S	886	TCAAAGCACCCCCGCACGCCCCATGATGAAACTCCGCCCTCTCAGACTTC										
Mus musculus	RefSeq	ILMN_219407	ILMN_219407	SPATA16	NM_029150.1	NM_029150.1		70862	28077040	NM_029150.1	Spata16	NP_083426.1	ILMN_3139235	003370497	A	1650	GGCAGACGCCATGGACACCCTTGAAGGAAAGAAGAGTGATAAGGAGCGTG	3	+	27118394-27118443	3qA3	Mus musculus spermatogenesis associated 16 (Spata16), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4921511F01Rik; Nyd-sp12; 4930503K02Rik	4921511F01Rik; Nyd-sp12; 4930503K02Rik
Mus musculus	RefSeq	ILMN_237060	ILMN_237060	HSF5	NM_001045527.1	NM_001045527.1		327992	113865886	NM_001045527.1	Hsf5	NP_001038992.1	ILMN_2984916	001770333	S	1415	GAGGCCAGCATATCTTACCCAATGCAAACAGCAGCAACCCATCTTCCACC	11	+	87449312-87449361	11qC	Mus musculus heat shock transcription factor family member 5 (Hsf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Gm739	Gm739
Mus musculus	RefSeq	ILMN_211965	ILMN_211965	LMX1A	NM_033652.4	NM_033652.4		110648	146149077	NM_033652.4	Lmx1a	NP_387501.1	ILMN_2655648	007210435	S	730	GGAGAGCCTTTGCAAGTCAGCCCATGGGGCAGGAAAAGGAGCATCAGAGG				1qH2.3	Mus musculus LIM homeobox transcription factor 1 alpha (Lmx1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus [goid 21542] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	sst; MGC129356; MGC129357; Lmx1.1; dr; dreher	sst; MGC129356; MGC129357; Lmx1.1; dr; dreher
Mus musculus	RefSeq	ILMN_211965	ILMN_211965	LMX1A	NM_033652.4	NM_033652.4		110648	146149077	NM_033652.4	Lmx1a	NP_387501.1	ILMN_1249859	001030747	S	3271	GAAAGCAAACAGAGATCCTTAATTCTACTCTCTAATGACATACCGAGATG				1qH2.3	Mus musculus LIM homeobox transcription factor 1 alpha (Lmx1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus [goid 21542] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	sst; MGC129356; MGC129357; Lmx1.1; dr; dreher	sst; MGC129356; MGC129357; Lmx1.1; dr; dreher
Mus musculus	RefSeq	ILMN_199652	ILMN_199652	LOC382849	XM_356708.1	XM_356708.1			38075586	XM_356708.1	LOC382849		ILMN_1247325	001770097	S	33	GGAGAACTCCTCCAGCATTGAGAACAATGTGAGGTGGAGCTTGGAGAACG										
Mus musculus	MEEBO	ILMN_219268	ILMN_219268	TCFAP4	scl48808.9.1_233	NM_031182.1			13626033	NM_031182.1	Tcfap4		ILMN_2706477	002850039	S	1994	TTGTGTCCAAGGAGAAGCTATTATATTTTGTTAAGAAAATGGGGGTAGGG										
Mus musculus	RefSeq	ILMN_213191	ILMN_213191	RAB8A	NM_023126.2	NM_023126.2		17274	38372904	NM_023126.2	Rab8a	NP_075615.2	ILMN_2928050	000460504	S	1826	ACTCTAACTCTTCCCCCAAGCTCCAAGCTGCTGTCAGTCCAAGCTGTCAG	8	+	74705079-74705128	8qB3.3	Mus musculus RAB8A, member RAS oncogene family (Rab8a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AA409338; Mel	AA409338; Mel
Mus musculus	RefSeq	ILMN_213191	ILMN_213191	RAB8A	NM_023126.2	NM_023126.2		17274	38372904	NM_023126.2	Rab8a	NP_075615.2	ILMN_2928051	001240324	S	1592	GACAAGCATTCCATGGCACAGCGCTCCCCTGCTGTCTTTACCCAGTTGTG	8	+	74704845-74704894	8qB3.3	Mus musculus RAB8A, member RAS oncogene family (Rab8a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AA409338; Mel	AA409338; Mel
Mus musculus	RefSeq	ILMN_197613	ILMN_197613	LOC380940	XM_354847.1	XM_354847.1			38076848	XM_354847.1	LOC380940		ILMN_1222508	006040315	S	435	AGCCATGGTGTTGCAGAAGACAGATTAGAGATGATTATGCCAATCTACAC										
Mus musculus	RefSeq	ILMN_186240	ILMN_242378	ZC3H15	NM_026934.3	NM_026934.3		69082	118130305	NM_026934.3	Zc3h15	NP_081210.2	ILMN_1252832	004070332	S	1723	GAGTGGTGTCCTTTCCTTTGTATTTATATGTTTTAGAGACTGCCTGAAAG	2	+	83504534-83504583	2qD	Mus musculus zinc finger CCCH-type containing 15 (Zc3h15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FM22; 1810012H02Rik; 2610312B22Rik; RP23-111F12.2; Ierepo4; 1700006A17Rik	FM22; 1810012H02Rik; 2610312B22Rik; RP23-111F12.2; Ierepo4; 1700006A17Rik
Mus musculus	RefSeq	ILMN_241470	ILMN_241470	ITGA1	NM_001033228.1	NM_001033228.1		109700	84370022	NM_001033228.1	Itga1	NP_001028400.1	ILMN_2967445	003990008	S	3626	CTGCAAGATTGCTACCATCACGTGTCATCTCCTTCCCTCGGATGTGAGTC	13	-	116089124-116089173	13qD2.2	Mus musculus integrin alpha 1 (Itga1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]; The migration of leukocytes from the blood vessels into the surrounding tissue [goid 45123] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Vla1; CD49A; E130012M19Rik	Vla1; CD49A; E130012M19Rik
Mus musculus	RefSeq	ILMN_216328	ILMN_216328	ETFDH	NM_025794.1	NM_025794.1		66841	21313289	NM_025794.1	Etfdh	NP_080070.1	ILMN_2669804	002570433	S	1507	GCTACACGCTGTTCGAAATATAAGGCCATCTTGCCACGGGATACTGGGAG	3	-	79409629-79409678	3qE3	Mus musculus electron transferring flavoprotein, dehydrogenase (Etfdh), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system [goid 17133] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: reduced ETF + ubiquinone = ETF + ubiquinol [goid 4174] [evidence IEA]	AV001013; 0610010I20Rik	AV001013; 0610010I20Rik
Mus musculus	RefSeq	ILMN_216328	ILMN_216328	ETFDH	NM_025794.1	NM_025794.1		66841	21313289	NM_025794.1	Etfdh	NP_080070.1	ILMN_3005058	001770167	S	1879	GGAACAAGGTGATGGATTTCGATTACAGATAAATGCTCAGAACTGTGTGC	3	-	79408015-79408064	3qE3	Mus musculus electron transferring flavoprotein, dehydrogenase (Etfdh), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system [goid 17133] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: reduced ETF + ubiquinone = ETF + ubiquinol [goid 4174] [evidence IEA]	AV001013; 0610010I20Rik	AV001013; 0610010I20Rik
Mus musculus	RefSeq	ILMN_209516	ILMN_317186	LOC100046746	XM_001476743.1	XM_001476743.1		100046746	149233715	XM_001476743.1	LOC100046746	XP_001476793.1	ILMN_1222674	003140669	S	110	ATCTTGGGGTTCATATATCCAGAGTCAAGTCAGTCAACCTAGACCAATGG					PREDICTED: Mus musculus similar to SMAP1 (LOC100046746), mRNA.					
Mus musculus	RefSeq	ILMN_191667	ILMN_317186	LOC100046746	XM_001476743.1	XM_001476743.1		100046746	149233715	XM_001476743.1	LOC100046746	XP_001476793.1	ILMN_2481113	005270367	S	366	GCCTTTGGTATCCTCTCCTTCTCTGCAAGCTGCTGTTGATAAAAACAAGT					PREDICTED: Mus musculus similar to SMAP1 (LOC100046746), mRNA.					
Mus musculus	RefSeq	ILMN_201569	ILMN_201569	OLFR930	NM_146272.1	NM_146272.1		258269	22129742	NM_146272.1	Olfr930	NP_666384.1	ILMN_2997596	006020370	S	408	GTCCTCTAAACACTGCTTACTGTTAGTGCTAGTTGCCTTCACCCTAGGCC	9	+	38738165-38738214	9qA5.1	Mus musculus olfactory receptor 930 (Olfr930), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR171-46	MOR171-46
Mus musculus	RefSeq	ILMN_195905	ILMN_195905	ZSCAN5B	NM_133204.2	NM_133204.2		170734	83025106	NM_133204.2	Zscan5b	NP_573467.2	ILMN_2519822	005690520	S	1800	GAGAAATGGAGGTTGGGTTGCCCCTATTCTGAGAGTCTCATCCCTTCATG	7	+	6190845-6190894	7qA1	Mus musculus zinc finger and SCAN domain containing 5B (Zscan5b), mRNA.				Zfg1; MGC129409; MGC129408	Zfg1; MGC129409; MGC129408
Mus musculus	RefSeq	ILMN_199870	ILMN_199870	LOC381533	XM_355501.1	XM_355501.1			38078452	XM_355501.1	LOC381533		ILMN_1229479	006520601	S	593	GGTGGCCGGTTGTCTGGAGCCGAAGATCCAGTTCTAGTTTTTGAAGTGTT										
Mus musculus	RefSeq	ILMN_227970	ILMN_227970	GRHL3	NM_001013756.1	NM_001013756.1		230824	71480135	NM_001013756.1	Grhl3	NP_001013778.1	ILMN_2971031	002340400	S	1968	AGCTGGACGGCAAGATCCAGATCATCCTGAAGGAGCTATGAGGGCCCGGC	4	-	135098564-135098573:135098574-135098613	4qD3	Mus musculus grainyhead-like 3 (Drosophila) (Grhl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Get1; Tfcp2l4; Som; AI561912; MGC102260	Get1; Tfcp2l4; Som; AI561912; MGC102260
Mus musculus	RefSeq	ILMN_197847	ILMN_227970	GRHL3	NM_001013756.1	NM_001013756.1		230824	71480135	NM_001013756.1	Grhl3	NP_001013778.1	ILMN_1222815	006280020	S	1738	GAGAGTTCTGTTGTATGTGAGGAGGGAGACAGAGGAGGTGTTTGACGCGC	4	-	135104368-135104413:135105154-135105157	4qD3	Mus musculus grainyhead-like 3 (Drosophila) (Grhl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Get1; Tfcp2l4; Som; AI561912; MGC102260	Get1; Tfcp2l4; Som; AI561912; MGC102260
Mus musculus	RefSeq	ILMN_191837	ILMN_235195	LRRC52	NM_001013382.2	NM_001013382.2		240899	142376921	NM_001013382.2	Lrrc52	NP_001013400.1	ILMN_2526954	005260538	S	894	CCTCCGAACGTCGAGCGGGGATGATACCGAAGATGAAACTGGGAGTAGAT	1	-	169375999-169376048	1qH2.3	Mus musculus leucine rich repeat containing 52 (Lrrc52), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4930413P14Rik	4930413P14Rik
Mus musculus	RefSeq	ILMN_195879	ILMN_195879	UPK1B	NM_178924.3	NM_178924.3		22268	142384775	NM_178924.3	Upk1b	NP_849255.1	ILMN_2519577	002360075	S	1097	CAGAAGGTGTACTATATATGTACTATATATAATATAGTACTTACGTGTAC	16	-	38773917-38773966	16qB4	Mus musculus uroplakin 1B (Upk1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Upk1; UPIb; Tspan20; AI413235	Upk1; UPIb; Tspan20; AI413235
Mus musculus	RefSeq	ILMN_195296	ILMN_231400	RRP1B	NM_028244.1	NM_028244.1		72462	28076996	NM_028244.1	Rrp1b	NP_082520.1	ILMN_2595283	006420196	S	1958	ACAGCATCCAGCACCCTTGACCCCTGTGATCCGTCCAGTCAAAAACCAGC	17	+	32194070-32194119	17qB1	Mus musculus ribosomal RNA processing 1 homolog B (S. cerevisiae) (Rrp1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit [goid 30688] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		2600005C20Rik; mKIAA0179; D030064A17; Kiaa0179	2600005C20Rik; mKIAA0179; D030064A17; Kiaa0179
Mus musculus	RefSeq	ILMN_195296	ILMN_231400	RRP1B	NM_028244.1	NM_028244.1		72462	28076996	NM_028244.1	Rrp1b	NP_082520.1	ILMN_1222251	006650431	S	2100	GGACTCTGAAGAAGCCGCTGAAAACGGAGGACGACTTTGTGAAGTTTGAC	17	+	32195479-32195528	17qB1	Mus musculus ribosomal RNA processing 1 homolog B (S. cerevisiae) (Rrp1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit [goid 30688] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		2600005C20Rik; mKIAA0179; D030064A17; Kiaa0179	2600005C20Rik; mKIAA0179; D030064A17; Kiaa0179
Mus musculus	RefSeq	ILMN_231400	ILMN_231400	RRP1B	NM_028244.1	NM_028244.1		72462	28076996	NM_028244.1	Rrp1b	NP_082520.1	ILMN_2880346	007380673	S	2432	ATGAGGCTACCAGCCACCACCCCAAAGAGAAGGCCAAGGGCTGCGGACTT	17	+	32197430-32197479	17qB1	Mus musculus ribosomal RNA processing 1 homolog B (S. cerevisiae) (Rrp1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit [goid 30688] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		2600005C20Rik; mKIAA0179; D030064A17; Kiaa0179	2600005C20Rik; mKIAA0179; D030064A17; Kiaa0179
Mus musculus	Riken	ILMN_204052	ILMN_204052	A130039H09RIK	ri|A130039H09|PX00123M16|AK037708|3522					AK037708	A130039H09Rik		ILMN_2561993	001410274	S	3156	GGCAGCCTACCAGAGCCACTGTTGGTTTACAGCCTTTGCCTGCCCACATG										
Mus musculus	Riken	ILMN_202474	ILMN_202474	5830461H18RIK	ri|5830461H18|PX00040O03|AK018024|1269					AK018024	5830461H18Rik		ILMN_1220553	000990753	S	1154	CCCCCCGCACCCCCCCCCCGAAAAAAAAAAGAACAGGGAAGGAGGCTATT										
Mus musculus	RefSeq	ILMN_184396	ILMN_230920	RAGE	NM_011973.2	NM_011973.2		26448	118129968	NM_011973.2	Rage	NP_036103.1	ILMN_2661520	003190372	S	326	AGTCTGCGAGAGATCCAAGCACTGAGGCGCCTGAACCCACACCCCAACAT	12	-	112066274-112066323	12qF1	Mus musculus renal tumor antigen (Rage), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	MGC46883; MOK; MGC107277; RAGE1	MGC46883; MOK; MGC107277; RAGE1
Mus musculus	RefSeq	ILMN_184396	ILMN_230920	RAGE	NM_011973.2	NM_011973.2		26448	118129968	NM_011973.2	Rage	NP_036103.1	ILMN_2699175	004210131	S	401	GACAGAAAATCTGGTTCTCTTGCACTAATATGTGAACTTATGGACATGAA	12	-	112064671-112064720	12qF1	Mus musculus renal tumor antigen (Rage), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	MGC46883; MOK; MGC107277; RAGE1	MGC46883; MOK; MGC107277; RAGE1
Mus musculus	RefSeq	ILMN_184396	ILMN_230920	RAGE	NM_011973.2	NM_011973.2		26448	118129968	NM_011973.2	Rage	NP_036103.1	ILMN_2755243	006290717	S	1618	TGGAGCCTTGCGTGTTTGCAGCTCCAGAGCGGCTGCACTGAATGTTTCCG	12	-	112046033-112046082	12qF1	Mus musculus renal tumor antigen (Rage), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	MGC46883; MOK; MGC107277; RAGE1	MGC46883; MOK; MGC107277; RAGE1
Mus musculus	RefSeq	ILMN_192367	ILMN_224364	RASGRP2	NM_011242.2	NM_011242.2		19395	131888393	NM_011242.2	Rasgrp2	NP_035372.2	ILMN_1244516	006180192	S	1130	GGAGCCAAGATGAGGCAGCTTTTCTGCATTCTGGAGGAGTTGGCCATGGT	19	+	6401829-6401863:6402372-6402386	19qA	Mus musculus RAS, guanyl releasing protein 2 (Rasgrp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CDC25L	CDC25L
Mus musculus	RefSeq	ILMN_217065	ILMN_224364	RASGRP2	NM_011242.2	NM_011242.2		19395	131888393	NM_011242.2	Rasgrp2	NP_035372.2	ILMN_2678726	001090377	S	1823	CCCTCTCCCTCACCCACACATACCCACCATCGGGCCTTCAGCTTTTCCCT	19	+	6403779-6403828	19qA	Mus musculus RAS, guanyl releasing protein 2 (Rasgrp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CDC25L	CDC25L
Mus musculus	RefSeq	ILMN_259315	ILMN_259315	OLFR1034	NM_001011872.1	NM_001011872.1		258216	58801503	NM_001011872.1	Olfr1034	NP_001011872.1	ILMN_2832291	005670725	S	318	GCACGTGGAGGTCTATATTCTGGCAGTGATGGCCTTTGATCGCTACATGG	2	+	85886958-85887007	2qD	Mus musculus olfactory receptor 1034 (Olfr1034), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR245-14P	MOR245-14P
Mus musculus	RefSeq	ILMN_216932	ILMN_216932	SCD3	NM_024450.2	NM_024450.2		30049	86439985	NM_024450.2	Scd3	NP_077770.1	ILMN_1224968	001190367	S	1342	GCTGGATAGGGGTTTAATAATGTTTTTTCAAATACCGAAAAGAAGCACCC	19	+	44316378-44316427	19qC3	Mus musculus stearoyl-coenzyme A desaturase 3 (Scd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	4930513N16Rik	4930513N16Rik
Mus musculus	Riken	ILMN_206839	ILMN_206839	E030049M15RIK	ri|E030049M15|PX00207J15|AK087359|1842					AK087359	E030049M15Rik		ILMN_1239883	001300128	S	1592	TGAGTCAGGCATTGATGGTGGCGACAGCGGTTGTAGGGGCAGCAGTTGCT										
Mus musculus	MEEBO	ILMN_220438	ILMN_220438	4930417P05RIK	scl24629.16.1_93	XM_131829.2			28499611	XM_131829.2	4930417P05Rik		ILMN_2722009	002030039	S	1421	ACCCACTGGCCCCATGTCCCTGAAGATCACCAGAAGCTCTAAGCTAGCGG										
Mus musculus	MEEBO	ILMN_184239	ILMN_184239	AK122498	scl21349.34_3				51708542	XM_143575	AK122498		ILMN_2524245	002470110	S	4771	CCTTCTGACAAGGTTAAGGCTACAGATAGAGTATGGGCGCTGGCAAAGGG										
Mus musculus	RefSeq	ILMN_210947	ILMN_210947	KRCC1	NM_145568.3	NM_145568.3		57896	47271541	NM_145568.3	Krcc1	NP_663543.1	ILMN_2610899	002360521	S	1199	CTCCTGAGGCTCCACTGAAATAACAGTCAAGGAGCTTGGTTTTATGTGCA	6	+	71234763-71234812	6qC1	Mus musculus lysine-rich coiled-coil 1 (Krcc1), mRNA.				AA792894	AA792894
Mus musculus	RefSeq	ILMN_211739	ILMN_211739	MICAL3	NM_153396.1	NM_153396.1		194401	23510262	NM_153396.1	Mical3	NP_700445.1	ILMN_2619044	004200592	S	2628	TGTGAGTACTGTGCCACCACGCTGCGCCTATCAGCCTACGCCTACGACAT	6	-	120959020-120959069	6qF1	Mus musculus microtubule associated monoxygenase, calponin and LIM domain containing 3 (Mical3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	C130040D16Rik; mKIAA1364; MICAL-3	C130040D16Rik; mKIAA1364; MICAL-3
Mus musculus	RefSeq	ILMN_198384	ILMN_198384	LOC381194	XM_355124.1	XM_355124.1			38084787	XM_355124.1	LOC381194		ILMN_1249731	004640025	S	57	CCTAGAATCCATCGGGCAAGCAGAAAACAAGAGGCCCAAGAGGGGCAGCC										
Mus musculus	RefSeq	ILMN_220789	ILMN_220789	GNB4	NM_013531.3	NM_013531.3		14696	145301555	NM_013531.3	Gnb4	NP_038559.2	ILMN_2726905	001580133	S	1160	GTGCCATATTTTCTGTTCTCCAATGATACCTGGAGAAATCCGTGTTACAG				3qA3	Mus musculus guanine nucleotide binding protein (G protein), beta 4 (Gnb4), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	6720453A21Rik; G(beta)4	6720453A21Rik; G(beta)4
Mus musculus	RefSeq	ILMN_220789	ILMN_220789	GNB4	NM_013531.3	NM_013531.3		14696	145301555	NM_013531.3	Gnb4	NP_038559.2	ILMN_1240125	005270435	S	2555	CTCCTAACGGAACAGACAGCTCTCCTCTTCAGTTCTCTCCTGTAGATTCA				3qA3	Mus musculus guanine nucleotide binding protein (G protein), beta 4 (Gnb4), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	6720453A21Rik; G(beta)4	6720453A21Rik; G(beta)4
Mus musculus	RefSeq	ILMN_197302	ILMN_197302	LOC380864	XM_358446.1	XM_358446.1			38075054	XM_358446.1	LOC380864		ILMN_1247639	004070427	S	264	CGAGACAACGGCCACCTTGGGGCGGAAGCCAGAGTGGATTTTCCAGAGAA										
Mus musculus	RefSeq	ILMN_239920	ILMN_239920	APOM	NM_018816.1	NM_018816.1		55938	9055161	NM_018816.1	Apom	NP_061286.1	ILMN_2916782	005910167	S	615	CCCGTGTCCTAGACAGACAAGATAGGAGCCCAGCTTCGAGTGGAGAAGCC	17	-	35268250-35268294:35268297-35268301	17qB1	Mus musculus apolipoprotein M (Apom), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IMP]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	G3a; NG20; 1190010O19Rik	G3a; NG20; 1190010O19Rik
Mus musculus	RefSeq	ILMN_214637	ILMN_214637	A130022J15RIK	NM_175313.4	NM_175313.4		101351	146198523	NM_175313.4	A130022J15Rik	NP_780522.1	ILMN_2650183	004640753	S	2756	CTAAGTCTGTGATTCTCAGGACCAAACTATAGGACTACGTTATAGACCAG				6qD3	Mus musculus RIKEN cDNA A130022J15 gene (A130022J15Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AW214473; AW259391; AI447490	AW214473; AW259391; AI447490
Mus musculus	RefSeq	ILMN_217567	ILMN_217567	RPL39L	NM_026594.2	NM_026594.2		68172	141803088	NM_026594.2	Rpl39l	NP_080870.1	ILMN_2684892	001070367	S	423	GCTGAGTGTGTTTCTTAGGAATATAAGTTTTCTTTCTGTGCTTTAGTGAG	16	+	10174622-10174671	16qA1	Mus musculus ribosomal protein L39-like (Rpl39l), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930517K11Rik	4930517K11Rik
Mus musculus	MEEBO	ILMN_221498	ILMN_221498	5031434O11RIK	scl23215.5.1_2				51708061	XM_488998	5031434O11Rik		ILMN_2736407	002140021	S	3257	CCCTGCAGTGTATCCAGTAAACTAAATTTAGACCCTCGGGGACAACAGAG										
Mus musculus	RefSeq	ILMN_198538	ILMN_320444	LOC668993	XR_033273.1	XR_033273.1		668993	149270998	XR_033273.1	LOC668993		ILMN_1231350	007380600	S	1012	AAGCTGCTGCTATACGACCCCCAGTCACAGCTCACTGCAAGAGAGGCCAC	X	+	16188286-16188335	XqA1.2	PREDICTED: Mus musculus similar to casein kinase II alpha subunit (LOC668993), misc RNA.					
Mus musculus	MEEBO	ILMN_190917	ILMN_190917	RNF3	scl27461.14.462_26				31044443	NM_172716	Rnf3		ILMN_1259001	005050204	S	20	TAAACTGAGATGCGTAGATTAGGAAATCACTTAATTGTACCACAGTCTGC										
Mus musculus	RefSeq	ILMN_221588	ILMN_221588	F2RL3	NM_007975.3	NM_007975.3		14065	141803010	NM_007975.3	F2rl3	NP_032001.2	ILMN_2737523	004760010	S	1642	GCACAGTGTAGATGTGTCTGCACACATATATTGTATGTGCCTGCGGGTAC	8	+	75287664-75287713	8qB3.3	Mus musculus coagulation factor II (thrombin) receptor-like 3 (F2rl3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with thrombin to initiate a change in cell activity [goid 15057] [evidence IEA]	PAR4	PAR4
Mus musculus	RefSeq	ILMN_218006	ILMN_218006	NRADD	NM_026012.2	NM_026012.2		67169	47271512	NM_026012.2	Nradd	NP_080288.1	ILMN_2690396	004220091	S	501	GGTGACAGCAACGTCTTCGTGGACTCTCCTCCTAGTCTGGAGCCCTGTAT	9	-	110524354-110524403	9qF2	Mus musculus neurotrophin receptor associated death domain (Nradd), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	BB104149; 2610311B09Rik; PLAIDD; NRDD	BB104149; 2610311B09Rik; PLAIDD; NRDD
Mus musculus	RefSeq	ILMN_257547	ILMN_257547	SMG5	NM_178246.3	NM_178246.3		229512	112807192	NM_178246.3	Smg5	NP_839977.2	ILMN_2877909	005820309	S	4216	CAGTTCTACCCCTCAGGCTGGAAGCAGAGCATAGCTGGGGCTGGGTTCTT	3	+	88166028-88166077	3qF1	Mus musculus Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) (Smg5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]		BC024683; MGC30464; mKIAA1089; MGC56792; MGC118167	BC024683; MGC30464; mKIAA1089; MGC56792; MGC118167
Mus musculus	RefSeq	ILMN_196646	ILMN_257547	SMG5	NM_178246.3	NM_178246.3		229512	112807192	NM_178246.3	Smg5	NP_839977.2	ILMN_1232896	003940209	S	4333	CAGCCTTCCACTAAGAAAGAAGGTCTGGGAAAACCAGGGAACAGTTGGGG	3	+	88166145-88166194	3qF1	Mus musculus Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) (Smg5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]		BC024683; MGC30464; mKIAA1089; MGC56792; MGC118167	BC024683; MGC30464; mKIAA1089; MGC56792; MGC118167
Mus musculus	Riken	ILMN_205169	ILMN_205169	A830087P12RIK	ri|A830087P12|PX00156G08|AK044077|2563					AK044077	A830087P12Rik		ILMN_1236899	004780201	S	2261	TAACCTGCACCTGGAAATATGCCACTACCCTTGGAGGACAGCCCCCACTG										
Mus musculus	RefSeq	ILMN_211361	ILMN_211361	DOK5	NM_029761.2	NM_029761.2		76829	31981354	NM_029761.2	Dok5	NP_084037.2	ILMN_2615070	002370767	S	1075	ACTTTCCCCACCTACCGGTCTGAGCACTGACAGCAACCGCCAAGAGCTGT	2	+	170570414-170570443:170570444-170570463	2qH3	Mus musculus docking protein 5 (Dok5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IPI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]	Interacting selectively with the insulin receptor [goid 5158] [evidence IEA];  [goid 5066] [evidence IPI]	2700055C10Rik	2700055C10Rik
Mus musculus	RefSeq	ILMN_211361	ILMN_211361	DOK5	NM_029761.2	NM_029761.2		76829	31981354	NM_029761.2	Dok5	NP_084037.2	ILMN_1235265	005270600	S	200	AATGACATAGTGAAGCAGGGGTACGTGAGGATCCGGAGCAGACGCCTAGG	2	+	170423344-170423393	2qH3	Mus musculus docking protein 5 (Dok5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IPI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]	Interacting selectively with the insulin receptor [goid 5158] [evidence IEA];  [goid 5066] [evidence IPI]	2700055C10Rik	2700055C10Rik
Mus musculus	RefSeq	ILMN_211361	ILMN_211361	DOK5	NM_029761.2	NM_029761.2		76829	31981354	NM_029761.2	Dok5	NP_084037.2	ILMN_2615071	001230474	S	1076	CTTTCCCCACCTACCGGTCTGAGCACTGACAGCAACCGCCAAGAGCTGTT	2	+	170570415-170570443:170570444-170570464	2qH3	Mus musculus docking protein 5 (Dok5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IPI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]	Interacting selectively with the insulin receptor [goid 5158] [evidence IEA];  [goid 5066] [evidence IPI]	2700055C10Rik	2700055C10Rik
Mus musculus	Riken	ILMN_202575	ILMN_202575	RAB3C	ri|2700062I01|ZX00082F10|AK012468|924					AK012468	Rab3c		ILMN_2550647	007400121	S	867	ACCAGAAATGTCACCACAGCAATGGGAAATATCTGTTCAGCCCTCACAGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216770	ILMN_237012	EG331493	NM_001033541.2	NM_001033541.2		331493	142359007	NM_001033541.2	EG331493	NP_001028713.1	ILMN_2675162	005810524	S	820	GCTTGAATATGTCAAAGGCCTTAACATCTCCTATCTTGGCATTCATAGGC	X	+	103904907-103904956	XqD	Mus musculus predicted gene, EG331493 (EG331493), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	B130007I08	B130007I08
Mus musculus	RefSeq	ILMN_196704	ILMN_196704	LOC331102	XM_284573.2	XM_284573.2			38096707	XM_284573.2	LOC331102		ILMN_2525491	004480414	S	103	GAGGAGGACTCCGGATCCGGCTCGGCGCTCGCCCTCGCTCGCCATGGAGA										
Mus musculus	RefSeq	ILMN_213897	ILMN_213897	CPLX1	NM_007756.2	NM_007756.2		12889	31542415	NM_007756.2	Cplx1	NP_031782.2	ILMN_1226042	004890408	S	2024	CCTCCTGCATGTCAGAGGCCTCACATTTTCTCTCTGAGGGAATCACAGCC	5	-	108947596-108947645	5qF	Mus musculus complexin 1 (Cplx1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence ISO]; A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25 [goid 31201] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence ISO]; A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, and complexin I (or orthologs thereof) [goid 70032] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence IMP]	Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IEA]; Enables the directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 5326] [evidence IMP]; Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence ISO]	921-S	921-S
Mus musculus	Riken	ILMN_201948	ILMN_201948	4930420O11RIK	ri|4930420O11|PX00030A24|AK015170|1004					AK015170	4930420O11Rik		ILMN_1243671	001090619	S	922	CCCTCGCTCACAGCCAGTTTGTTGGTGTAAGGAGAGACCACTCTTCAGTG										
Mus musculus	Riken	ILMN_206616	ILMN_206616	E330009F12RIK	ri|E330009F12|PX00211D01|AK087703|2085					AK087703	E330009F12Rik		ILMN_2581402	004040598	S	1933	GGGCCATCTGACATTTGTGTGCTCCTAACCACTGAGTCTAACCACTGAGC										
Mus musculus	MEEBO	ILMN_196238	ILMN_196238	9930105H17RIK	scl0100669.2_129						9930105H17Rik		ILMN_2522884	001990500	S	10	TAAACCTCTTTGTGCGCAGCTGGGAGAGCACAGCCAGCCAAAGTCACCAG										
Mus musculus	Riken	ILMN_203899	ILMN_203899	PSTPIP2	ri|9330137F11|PX00105N05|AK033996|1323					AK033996	Pstpip2		ILMN_2560823	007560333	S	1138	GATGCCAGTTTAGAATGAGAGGAAGTTGGTTCCTGTGACCATGTGATTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence NAS]		
Mus musculus	RefSeq	ILMN_238267	ILMN_238267	PNPLA5	NM_029427.1	NM_029427.1		75772	115749408	NM_029427.1	Pnpla5	NP_083703.1	ILMN_2850595	002030209	S	1353	ATGGACTGAGAGCCCACCCTCTGCAGCTGTTCCTGGGACCTTGATCTCCA	15	-	83943342-83943383:83943384-83943391	15qE2	Mus musculus patatin-like phospholipase domain containing 5 (Pnpla5), mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC130406; 4833426H19Rik; MGC130407; GS2L	MGC130406; 4833426H19Rik; MGC130407; GS2L
Mus musculus	Riken	ILMN_205603	ILMN_205603	GAD1	ri|B930082L20|PX00166A05|AK047521|1706					AK047521	Gad1		ILMN_2573826	004920243	S	1606	CTCTTGGACCCTGTTTAGCACCCCGATCTTGCTTCCATGACTGTCCTACC						The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2 [goid 4351] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219188	ILMN_219188	SLC39A5	NM_028051.1	NM_028051.1		72002	21312539	NM_028051.1	Slc39a5	NP_082327.1	ILMN_2735308	002100161	S	1956	CACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGATTT	10	-	127798902-127798951	10qD3	Mus musculus solute carrier family 39 (metal ion transporter), member 5 (Slc39a5), mRNA.	The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence TAS]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence TAS]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	2010205A06Rik; Zip5; 1810013D05Rik	2010205A06Rik; Zip5; 1810013D05Rik
Mus musculus	RefSeq	ILMN_196581	ILMN_196581	DEFA1	NM_010031.2	NM_010031.2		13216	31981802	NM_010031.2	Defa1	NP_034161.2	ILMN_2731509	006480121	S	250	GAGGCTGCAAAGGAAGAGAACGCATGAATGGAACCTGCAGAAAGGGTCAT	8	+	22550628-22550673:22550674-22550677		Mus musculus defensin, alpha 1 (Defa1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defcr; Defcr1; cryptdin-1	Defcr; Defcr1; cryptdin-1
Mus musculus	RefSeq	ILMN_196581	ILMN_196581	DEFA1	NM_010031.2	NM_010031.2		13216	31981802	NM_010031.2	Defa1	NP_034161.2	ILMN_2669974	004280639	S	183	GGAGACCCAGAAGGCACTTCTCTTCAAGAGGAATCGTTGAGAGATCTGGT	8	+	22550002-22550004:22550564-22550610		Mus musculus defensin, alpha 1 (Defa1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defcr; Defcr1; cryptdin-1	Defcr; Defcr1; cryptdin-1
Mus musculus	RefSeq	ILMN_196581	ILMN_196581	DEFA1	NM_010031.2	NM_010031.2		13216	31981802	NM_010031.2	Defa1	NP_034161.2	ILMN_1215673	004570435	S	8	GCCTGCTCATCCTAATCCATCCAGGTGACTCGCAGCCATGAAGAAACTAG	8	+	22549827-22549832:22549833-22549876		Mus musculus defensin, alpha 1 (Defa1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defcr; Defcr1; cryptdin-1	Defcr; Defcr1; cryptdin-1
Mus musculus	RefSeq	ILMN_196581	ILMN_196581	DEFA1	NM_010031.2	NM_010031.2		13216	31981802	NM_010031.2	Defa1	NP_034161.2	ILMN_2732554	000840494	S	247	CAAGAGGCTGCAAAGGAAGAGAACGCATGAATGGAACCTGCAGAAAGGGT	8	+	22550625-22550673:22550674-22550674		Mus musculus defensin, alpha 1 (Defa1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defcr; Defcr1; cryptdin-1	Defcr; Defcr1; cryptdin-1
Mus musculus	RefSeq	ILMN_208871	ILMN_208871	NHLRC2	NM_025811.3	NM_025811.3		66866	146134914	NM_025811.3	Nhlrc2	NP_080087.1	ILMN_2590321	002370603	S	3328	GCTGTGTGTGATGGGTTATTGTAGTGGCTAGGCTGGCTGTCATGAGCATC				19qD2	Mus musculus NHL repeat containing 2 (Nhlrc2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AV002846; 1200003G01Rik	AV002846; 1200003G01Rik
Mus musculus	RefSeq	ILMN_211630	ILMN_211630	OVOL1	NM_019935.3	NM_019935.3		18426	142374732	NM_019935.3	Ovol1	NP_064319.1	ILMN_2617858	004280010	S	2688	CTGTGTTGGCATCTTTGTGTCTGTAAGCTCGTTGCCAATCTGGGGCCATC	19	-	5549299-5549348	19qA	Mus musculus OVO homolog-like 1 (Drosophila) (Ovol1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	Ovo1; BB147136; movo1	Ovo1; BB147136; movo1
Mus musculus	RefSeq	ILMN_210329	ILMN_210329	PVRL1	NM_021424.2	NM_021424.2		58235	40254533	NM_021424.2	Pvrl1	NP_067399.2	ILMN_2604486	001570538	S	4745	ATGCTGCTTTCTGACCCCAGCTGTGAAGAGTGGGCTGGGGGGAAGAGGGT	9	+	43615228-43615277	9qA5.1	Mus musculus poliovirus receptor-related 1 (Pvrl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	AW549174; nectin-1; PRR; HveC; AI835281; PRR1; HIgR; Cd111	AW549174; nectin-1; PRR; HveC; AI835281; PRR1; HIgR; Cd111
Mus musculus	RefSeq	ILMN_220997	ILMN_210329	PVRL1	NM_021424.2	NM_021424.2		58235	40254533	NM_021424.2	Pvrl1	NP_067399.2	ILMN_2729692	000840754	S	1547	GGACTTGGCTGAGAACATGGTTTCTCAGAACGACGGGTCTTTCATTTCCA	9	+	43612030-43612079	9qA5.1	Mus musculus poliovirus receptor-related 1 (Pvrl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	AW549174; nectin-1; PRR; HveC; AI835281; PRR1; HIgR; Cd111	AW549174; nectin-1; PRR; HveC; AI835281; PRR1; HIgR; Cd111
Mus musculus	RefSeq	ILMN_220997	ILMN_210329	PVRL1	NM_021424.2	NM_021424.2		58235	40254533	NM_021424.2	Pvrl1	NP_067399.2	ILMN_2729952	006760020	S	1019	GGCCACCAACCCTATTGGCACCCGATCGGGCCAGGTGGAGGTCAATATCA	9	+	43602272-43602321	9qA5.1	Mus musculus poliovirus receptor-related 1 (Pvrl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	AW549174; nectin-1; PRR; HveC; AI835281; PRR1; HIgR; Cd111	AW549174; nectin-1; PRR; HveC; AI835281; PRR1; HIgR; Cd111
Mus musculus	RefSeq	ILMN_215625	ILMN_215625	CHRDL1	NM_031258.2	NM_031258.2		83453	31560015	NM_031258.2	Chrdl1	NP_112548.2	ILMN_2661755	002630390	S	2342	AAACACAAATTATTAAAATGGTGGTTTTTAAGACATGAGCTACATAAAAA	X	-	139733421-139733470	XqF2	Mus musculus chordin-like 1 (Chrdl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		CHL1; BB139951; Nrln1; VOPT; CHL	CHL1; BB139951; Nrln1; VOPT; CHL
Mus musculus	RefSeq	ILMN_215625	ILMN_215625	CHRDL1	NM_031258.2	NM_031258.2		83453	31560015	NM_031258.2	Chrdl1	NP_112548.2	ILMN_2726192	003400056	S	3182	GATAAGGGCTAACTAATAGTAGAGAAATCAGCATACTAAAATTCAGGTGG	X	-	139732581-139732630	XqF2	Mus musculus chordin-like 1 (Chrdl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		CHL1; BB139951; Nrln1; VOPT; CHL	CHL1; BB139951; Nrln1; VOPT; CHL
Mus musculus	RefSeq	ILMN_222322	ILMN_222322	PCDHGB8	NM_033580.1	NM_033580.1		93705	18087744	NM_033580.1	Pcdhgb8	NP_291058.1	ILMN_2748021	002940280	S	2353	GCTTCTGTAGCAGTGAGTGTCGCTGAGGAGAATAACAAGATAGTCTCGGA	18	+	37923885-37923934	18qB3	Mus musculus protocadherin gamma subfamily B, 8 (Pcdhgb8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214878	ILMN_214878	DEB1	NM_026794.2	NM_026794.2		26901	31982638	NM_026794.2	Deb1	NP_081070.1	ILMN_2652971	001660451	S	427	GGACCTGCGAGGACCTGAGGTGTATGACAGCGGTGTCATTGTCAACAATA	9	+	121621949-121621998	9qF4	Mus musculus differentially expressed in B16F10 1 (Deb1), mRNA.				AI463209; 1110020I04Rik	AI463209; 1110020I04Rik
Mus musculus	RefSeq	Txn1	ILMN_192535	TXN1	NM_011660.3	NM_011660.3		22166	123701799	NM_011660.3	Txn1	NP_035790.1	ILMN_1377922	004830750	S	687	CAGTTCTCAGCATCCATACGGCAGCTACTTGTTCCTCCAGTTCCAGGGAA	4	-	57956559-57956608	4qB3	Mus musculus thioredoxin 1 (Txn1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		AW550880; Txn; ADF	AW550880; Txn; ADF
Mus musculus	RefSeq	ILMN_192535	ILMN_192535	TXN1	NM_011660.3	NM_011660.3		22166	123701799	NM_011660.3	Txn1	NP_035790.1	ILMN_3009572	005870241	S	519	ATCATGCTCTGAAAAGTGTAACCAGCTACCAGCTGTTTAAAACCTGTACC	4	-	57956727-57956776	4qB3	Mus musculus thioredoxin 1 (Txn1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		AW550880; Txn; ADF	AW550880; Txn; ADF
Mus musculus	RefSeq	Txn1	ILMN_192535	TXN1	NM_011660.3	NM_011660.3		22166	123701799	NM_011660.3	Txn1	NP_035790.1	ILMN_2588054	000010220	S	857	CTGATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACAT	4	-	57956389-57956438	4qB3	Mus musculus thioredoxin 1 (Txn1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		AW550880; Txn; ADF	AW550880; Txn; ADF
Mus musculus	MEEBO	ILMN_194180	ILMN_194180	V1RB10	scl00113867.1_106	NM_053240.1			16716562	NM_053240.1	V1rb10		ILMN_2504123	004480056	S	8	AACAGGCCTGGGATCCTCACAGCACCAACGTTTCTTCTATAATCTATCCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]		
Mus musculus	MEEBO	ILMN_194180	ILMN_194180	V1RB10	scl00113867.1_106	NM_053240.1			16716562	NM_053240.1	V1rb10		ILMN_1224011	007400553	S	622	TGTCCGATAGCCATCATGGCAAGCCTTTCTCATTCAGTCTCTTTGCCCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]		
Mus musculus	RefSeq	ILMN_199884	ILMN_241347	GM1661	NM_001033774.2	NM_001033774.2		381544	142375490	NM_001033774.2	Gm1661	NP_001028946.1	ILMN_1221351	005910364	S	1113	GGCCCTTGAGCAGAGGCAAGCGCACGTCGTAGTGGATCAGGTCCTTTATC	4	-	116888067-116888116	4qD1	Mus musculus gene model 1661, (NCBI) (Gm1661), mRNA.				Gm1662	Gm1662
Mus musculus	RefSeq	ILMN_199885	ILMN_241347	GM1661	NM_001033774.2	NM_001033774.2		381544	142375490	NM_001033774.2	Gm1661	NP_001028946.1	ILMN_1227807	007570088	S	429	ACGTTCATCAAAACCAACGAAGGCAAGACTGGCCCCGAGCTGGAGCTGGA	4	-	116910297-116910346	4qD1	Mus musculus gene model 1661, (NCBI) (Gm1661), mRNA.				Gm1662	Gm1662
Mus musculus	RefSeq	ILMN_211291	ILMN_211291	SERHL	NM_023475.2	NM_023475.2		68607	24475681	NM_023475.2	Serhl	NP_075964.1	ILMN_2647170	002060731	S	854	TCAAAGCGCTGCAGGGGTACTACGATGTGAGGCGGGCGAATGATGCAGAC	15	+	82946005-82946054	15qE1	Mus musculus serine hydrolase-like (Serhl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISS]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence ISS]	AU019786; 0610008B10Rik; 1110019M09Rik	AU019786; 0610008B10Rik; 1110019M09Rik
Mus musculus	RefSeq	ILMN_211291	ILMN_211291	SERHL	NM_023475.2	NM_023475.2		68607	24475681	NM_023475.2	Serhl	NP_075964.1	ILMN_2614351	001740747	S	789	TTGACTTCGTAAGCAAGGAGATGTTCGTGCACTCTGCGAAGAGCCTGCAG	15	+	82944813-82944862	15qE1	Mus musculus serine hydrolase-like (Serhl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISS]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence ISS]	AU019786; 0610008B10Rik; 1110019M09Rik	AU019786; 0610008B10Rik; 1110019M09Rik
Mus musculus	RefSeq	ILMN_211291	ILMN_211291	SERHL	NM_023475.2	NM_023475.2		68607	24475681	NM_023475.2	Serhl	NP_075964.1	ILMN_2821148	005360041	S	2261	CATGTGGACTGGGTGCCTTGGCGAACTCGGTGCTGTCTCATATAGAGATA	15	+	82952324-82952373	15qE1	Mus musculus serine hydrolase-like (Serhl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISS]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence ISS]	AU019786; 0610008B10Rik; 1110019M09Rik	AU019786; 0610008B10Rik; 1110019M09Rik
Mus musculus	RefSeq	ILMN_211291	ILMN_211291	SERHL	NM_023475.2	NM_023475.2		68607	24475681	NM_023475.2	Serhl	NP_075964.1	ILMN_2647172	006520280	S	858	AAGCGCTGCAGGGGTACTACGATGTGAGGCGGGCGAATGATGCAGACAAG	15	+	82946009-82946058	15qE1	Mus musculus serine hydrolase-like (Serhl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISS]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence ISS]	AU019786; 0610008B10Rik; 1110019M09Rik	AU019786; 0610008B10Rik; 1110019M09Rik
Mus musculus	Riken	ILMN_204484	ILMN_204484	EDIL3	ri|B130031I01|PX00157O14|AK045088|1026					AK045088	Edil3		ILMN_1241891	006200564	S	782	CCTCACTCCACAGTACATATCACCACCTGCAGTGACGGCTGTTCCAGTCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210247	ILMN_210247	ARHGAP12	NM_029277.2	NM_029277.2		75415	89242138	NM_029277.2	Arhgap12	NP_083553.2	ILMN_3133817	005260114	A	4510	GTCCAAAACCTTTCTCCTAAGTCCTGTGGCTAATATCTTGTGTGTGTCGT	18	-	6024845-6024894	18qA1	Mus musculus Rho GTPase activating protein 12 (Arhgap12), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810011M08Rik	2810011M08Rik
Mus musculus	RefSeq	ILMN_214981	ILMN_214981	GLIPR1L2	NM_026223.2	NM_026223.2		67537	141802205	NM_026223.2	Glipr1l2	NP_080499.1	ILMN_2654176	000450446	S	1778	CACGTTACTCAGTATGTACAGTAGAATTTGTGGGGAAAATAAGTTGACAT	10	+	111545053-111545102	10qD2	Mus musculus GLI pathogenesis-related 1 like 2 (Glipr1l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			4921508O11Rik	4921508O11Rik
Mus musculus	RefSeq	ILMN_237838	ILMN_237838	NDUFV2	NM_028388.1	NM_028388.1		72900	110625953	NM_028388.1	Ndufv2	NP_082664.1	ILMN_2985053	004290600	S	707	GCTGGAGGCCTTACTTCTTTGACTGAACCACCCAAAGGACCTGGCTTTGG				17qE1.1	Mus musculus NADH dehydrogenase (ubiquinone) flavoprotein 2 (Ndufv2), mRNA. XM_981927 XM_981966	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	2900010C23Rik	2900010C23Rik
Mus musculus	RefSeq	ILMN_198109	ILMN_243297	BC023744	NM_001033311.3	NM_001033311.3		231668	148664202	NM_001033311.3	BC023744	NP_001028483.2	ILMN_1247499	002340161	S	1797	GGATGACAGTGATGGGCAGCAGAGTGGCATTGTTCAAGAGGATGGCAAGC				5qF	Mus musculus cDNA sequence BC023744 (BC023744), mRNA. XM_923702					
Mus musculus	RefSeq	ILMN_198109	ILMN_243297	BC023744	NM_001033311.3	NM_001033311.3		231668	148664202	NM_001033311.3	BC023744	NP_001028483.2	ILMN_1240289	003870736	S	3588	GCCCACATCCCTTCTTTCCGTTGATGCCATCCATACCCAGATCTCAAGGC				5qF	Mus musculus cDNA sequence BC023744 (BC023744), mRNA. XM_923702					
Mus musculus	RefSeq	ILMN_198305	ILMN_198305	LOC232619	XM_145207.2	XM_145207.2			38083745	XM_145207.2	LOC232619		ILMN_2531212	006330039	S	127	ACAGCGGGGCTATTGTGGGCACGATCATACAGCGCTTTGAGCAGAAGCAG										
Mus musculus	Riken	ILMN_203891	ILMN_203891	RRM1	ri|C530001L22|PX00080E18|AK049601|4557					AK049601	Rrm1		ILMN_1221606	001260097	S	4389	ACAGCATGTGTGTGAAGGTCAAAGGACAACTTGTGGGAGGCGGTCCCTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex composed of 2-4 or more subunits, which usually contains nonheme iron and requires ATP for catalysis. Catalyzes the formation of 2'-deoxyribonucleoside diphosphate and thioredoxin disulfide from ribonucleoside diphosphate and thioredoxin [goid 5971] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IPI]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200014	ILMN_200014	LOC383100	XM_356874.1	XM_356874.1			38079855	XM_356874.1	LOC383100		ILMN_1246043	006620059	S	253	CCCATGGACACCTATAGTGATGGCCTGAGGTCTCCCTACCCCACTGCAGA										
Mus musculus	RefSeq	ILMN_215324	ILMN_215324	ACOX2	NM_053115.1	NM_053115.1		93732	16716410	NM_053115.1	Acox2	NP_444345.1	ILMN_1252618	003290411	S	2307	GCACGGGGTGGCGTGCGGCTTGTTCAGATCAGCGAGTAAACTGGTACATG	14	-	9058158-9058207	14qA1	Mus musculus acyl-Coenzyme A oxidase 2, branched chain (Acox2), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + H2O2 [goid 3997] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA + H2O + acceptor = (24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestan-26-oyl-CoA + reduced acceptor [goid 33791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220486	ILMN_220486	GRCC10	NM_013535.1	NM_013535.1		14790	7305106	NM_013535.1	Grcc10	NP_038563.1	ILMN_2722678	007210681	S	270	GCTGCCCGTAGCCACACAGATCCAACAAGAGGTTATTAAAGCCTATGGCT	6	-	124690554-124690603	6qF2	Mus musculus gene rich cluster, C10 gene (Grcc10), mRNA.				C10; 2310033H05Rik	C10; 2310033H05Rik
Mus musculus	RefSeq	ILMN_212986	ILMN_212986	GGCX	NM_019802.3	NM_019802.3		56316	146134993	NM_019802.3	Ggcx	NP_062776.1	ILMN_1232184	007550047	S	2096	TAGCCCTTTCCATGAGCGATTTCTCCGCTTCGTGCTGCGAAAGCTCTACG				6qC1	Mus musculus gamma-glutamyl carboxylase (Ggcx), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase [goid 17187] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA];  [goid 8488] [evidence ISS]		
Mus musculus	RefSeq	ILMN_212986	ILMN_212986	GGCX	NM_019802.3	NM_019802.3		56316	146134993	NM_019802.3	Ggcx	NP_062776.1	ILMN_1249282	006520703	S	1460	GCCCCAGATCTACTTTGATATTTGGGTCTCCATCAATGACCGCTTCCAGC				6qC1	Mus musculus gamma-glutamyl carboxylase (Ggcx), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase [goid 17187] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA];  [goid 8488] [evidence ISS]		
Mus musculus	RefSeq	ILMN_210274	ILMN_210274	GRAMD3	NM_026240.2	NM_026240.2		107022	118403331	NM_026240.2	Gramd3	NP_080516.2	ILMN_2662192	006980064	S	805	GTGTTGGTAACAGTCCCAACCCATCTTCTGCTGAAAACAGTTTCCGGGCA	18	+	56645037-56645086	18qD3	Mus musculus GRAM domain containing 3 (Gramd3), mRNA.				9030613F08Rik; NS3TP2; AW061306; 9130427A09Rik	9030613F08Rik; NS3TP2; AW061306; 9130427A09Rik
Mus musculus	RefSeq	ILMN_210274	ILMN_210274	GRAMD3	NM_026240.2	NM_026240.2		107022	118403331	NM_026240.2	Gramd3	NP_080516.2	ILMN_2603958	004180601	S	1582	CCAGCTTAGGAAAGGGGGTGGGGAAAAGGGAATGAGTTTGCTTTTGTGCA	18	+	56662423-56662472	18qD3	Mus musculus GRAM domain containing 3 (Gramd3), mRNA.				9030613F08Rik; NS3TP2; AW061306; 9130427A09Rik	9030613F08Rik; NS3TP2; AW061306; 9130427A09Rik
Mus musculus	MEEBO	ILMN_217825	ILMN_217825	2610011E03RIK	scl25983.1.1_180	XM_149682.1			20845524	XM_149682.1	2610011E03Rik		ILMN_2688026	002810768	S	1822	GCCATCAGATCTTCCTTTGACTAGCACAAGTATTGTTTATCCAGATGTGG										
Mus musculus	RefSeq	ILMN_187411	ILMN_319073	ATAD2B	XM_001472910.1	XM_001472910.1		320817	149262939	XM_001472910.1	Atad2b	XP_001472960.1	ILMN_1252931	001990736	S	249	TCGCGTTGCCTCTCCGGGACGCAGGCCCGACAGGCTAGAGCGGAGCAGAA				12qA1.1	PREDICTED: Mus musculus ATPase family, AAA domain containing 2B (Atad2b), mRNA.					
Mus musculus	RefSeq	ILMN_219366	ILMN_219366	SLC1A7	NM_146255.1	NM_146255.1		242607	22122844	NM_146255.1	Slc1a7	NP_666367.1	ILMN_2707789	002070309	S	2911	GGGGTCAGAACTCTTTGTGTGGCAAAATGGAACAAGAGTCCCTAGTCCCT	4	+	107686041-107686090	4qC7	Mus musculus solute carrier family 1 (glutamate transporter), member 7 (Slc1a7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]	EAAT5; A930031E15Rik; MGC40736	EAAT5; A930031E15Rik; MGC40736
Mus musculus	Riken	ILMN_203104	ILMN_203104	4933405K21RIK	ri|4833429F02|PX00028J04|AK029395|818					AK029395	4933405K21Rik		ILMN_1253576	003060181	S	486	AAGTGAGAGCAGGGGACGGGGCTTGACACTACAGAGCCACTTTGTGGGAG										
Mus musculus	RefSeq	ILMN_240000	ILMN_240000	DBX1	NM_001005232.1	NM_001005232.1		13172	52421337	NM_001005232.1	Dbx1	NP_001005232.1	ILMN_2963413	001710487	S	1696	CTCTGCTTGATGTCCTTCTGCTACTCCAACGGGAGCCTTTTCAGAGTGCC	7	-	56887200-56887249	7qB5	Mus musculus developing brain homeobox 1 (Dbx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby a cell becomes capable of differentiating autonomously into a ventral spinal cord interneuron in an environment that is neutral with respect to the developmental pathway [goid 21521] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	AI426026; Dbx	AI426026; Dbx
Mus musculus	RefSeq	ILMN_196681	ILMN_240000	DBX1	NM_001005232.1	NM_001005232.1		13172	52421337	NM_001005232.1	Dbx1	NP_001005232.1	ILMN_2525361	007400288	S	686	CTGACGTGCAGCGGAAAGCCCTGGAGAAGACGTTCCAGAAGCAGAAGTAC	7	-	56888915-56888964	7qB5	Mus musculus developing brain homeobox 1 (Dbx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby a cell becomes capable of differentiating autonomously into a ventral spinal cord interneuron in an environment that is neutral with respect to the developmental pathway [goid 21521] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	AI426026; Dbx	AI426026; Dbx
Mus musculus	Riken	ILMN_203918	ILMN_203918	TRRP7	ri|9830168K16|PX00119C18|AK036731|3991					AK036731	Trrp7		ILMN_2560975	007570100	S	926	AGCATCCCTGGTCTGTGGGAGCCTAGCAGTGAAGTCAGGTAGGCACTTAC										
Mus musculus	RefSeq	ILMN_216468	ILMN_216468	HSP90AB1	NM_008302.3	NM_008302.3		15516	118130847	NM_008302.3	Hsp90ab1	NP_032328.2	ILMN_1246650	004040487	S	1283	GCAGAGCAAGATCCTGAAGGTCATCCGCAAGAACATCGTCAAGAAGTGCC	17	-	45706495-45706544	17qB3	Mus musculus heat shock protein 90kDa alpha (cytosolic), class B member 1 (Hsp90ab1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	Hspcb; C81438; MGC115780; AL022974; 90kDa; Hsp84-1; Hsp90; Hsp84	Hspcb; C81438; MGC115780; AL022974; 90kDa; Hsp84-1; Hsp90; Hsp84
Mus musculus	RefSeq	ILMN_216468	ILMN_216468	HSP90AB1	NM_008302.3	NM_008302.3		15516	118130847	NM_008302.3	Hsp90ab1	NP_032328.2	ILMN_1233733	006510133	S	1289	CAAGATCCTGAAGGTCATCCGCAAGAACATCGTCAAGAAGTGCCTGGAGC	17	-	45706489-45706538	17qB3	Mus musculus heat shock protein 90kDa alpha (cytosolic), class B member 1 (Hsp90ab1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	Hspcb; C81438; MGC115780; AL022974; 90kDa; Hsp84-1; Hsp90; Hsp84	Hspcb; C81438; MGC115780; AL022974; 90kDa; Hsp84-1; Hsp90; Hsp84
Mus musculus	RefSeq	ILMN_216468	ILMN_216468	HSP90AB1	NM_008302.3	NM_008302.3		15516	118130847	NM_008302.3	Hsp90ab1	NP_032328.2	ILMN_1238221	002190047	S	2262	GTGGATTAAAGCCTCCTGGAAGAAGCCCTGCCCTCTGTATAGTATCCCCG	17	-	45704922-45704963:45704964-45704971	17qB3	Mus musculus heat shock protein 90kDa alpha (cytosolic), class B member 1 (Hsp90ab1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	Hspcb; C81438; MGC115780; AL022974; 90kDa; Hsp84-1; Hsp90; Hsp84	Hspcb; C81438; MGC115780; AL022974; 90kDa; Hsp84-1; Hsp90; Hsp84
Mus musculus	RefSeq	ILMN_217984	ILMN_217984	OTX1	NM_011023.3	NM_011023.3		18423	76563937	NM_011023.3	Otx1	NP_035153.1	ILMN_2690126	004730593	S	2641	CCTGTGTACCTATCGGTTTTGGTTTTGGCCGCTTGGTTCAGTAGGTGGGA	11	-	21894901-21894950	11qA3.2	Mus musculus orthodenticle homolog 1 (Drosophila) (Otx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	A730044F23Rik; jv	A730044F23Rik; jv
Mus musculus	RefSeq	ILMN_243853	ILMN_243853	ESPN	NM_207690.2	NM_207690.2		56226	111494245	NM_207690.2	Espn	NP_997573.1	ILMN_3107059	006620544	A	1559	AGTGCTCTCGCAAACCCCTGCTGTCGCCTGGAAAAAAGTGCCCAAGCTGC	4	-	151494996-151495045	4qE2	Mus musculus espin (Espn), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence TAS]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence ISO]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Assembly of actin filament bundles in which the filaments are tightly packed (approximately 10-20 nm apart) and oriented with the same polarity [goid 30046] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; The assembly of a network of actin filaments; actin filaments on different axes and with differing orientations are crosslinked together to form a mesh of filaments [goid 51639] [evidence NAS]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	je	je
Mus musculus	RefSeq	ILMN_221908	ILMN_221908	OLFR20	NM_146923.1	NM_146923.1		258925	33239301	NM_146923.1	Olfr20	NP_667134.1	ILMN_2947005	004760619	S	872	GCCTGAGGAACAGAGACATGAAGGGAGCATTGGCCAGAGTTATTTGTAAG	11	+	73168128-73168177	11qB4	Mus musculus olfactory receptor 20 (Olfr20), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MTPCR06; Olfr21; MTPCR55; MOR135-11; RP23-213I10.4	MTPCR06; Olfr21; MTPCR55; MOR135-11; RP23-213I10.4
Mus musculus	RefSeq	ILMN_221114	ILMN_244186	1700021C14RIK	NM_029801.2	NM_029801.2		76927	142362413	NM_029801.2	1700021C14Rik	NP_084077.1	ILMN_1232146	002760370	S	418	CTCCCTGGCTTATGTTGCAAACTGTTACTAAATCACCTGCCCCAATTCCA	3	-	88086695-88086744	3qF1	Mus musculus RIKEN cDNA 1700021C14 gene (1700021C14Rik), mRNA.				MGC130252	MGC130252
Mus musculus	RefSeq	ILMN_238163	ILMN_238163	TAAR7E	NM_001010835.1	NM_001010835.1		276742	58082066	NM_001010835.1	Taar7e	NP_001010835.1	ILMN_2933488	007610066	S	451	GACCCCCTGATCTACCCCACCAGGTTTACTGCATCTGTTTCTAACAAGTG	10	+	23757870-23757919	10qA4	Mus musculus trace amine-associated receptor 7E (Taar7e), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm697	Gm697
Mus musculus	RefSeq	ILMN_223451	ILMN_223451	A630033E08RIK	NM_177358.3	NM_177358.3		240041	142381579	NM_177358.3	A630033E08Rik	NP_796332.1	ILMN_1243037	000060437	S	4143	TGCGTAACGACTCATTGCAAGAATCTACTACAATTAGTCATATCATAAAA	17	-	22984480-22984529	17qA3.3	Mus musculus RIKEN cDNA A630033E08 gene (A630033E08Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C730040L01Rik	C730040L01Rik
Mus musculus	RefSeq	ILMN_211983	ILMN_211983	FGFRL1	NM_054071.1	NM_054071.1		116701	16905100	NM_054071.1	Fgfrl1	NP_473412.1	ILMN_2621433	003830465	S	2058	CCCTGGGTATCAGGAGCCTATCATCAACCTGACTGGGGTGAGCAGTGCAG	5	+	109135644-109135693	5qF	Mus musculus fibroblast growth factor receptor-like 1 (Fgfrl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]	A receptor belonging to the FGFR family but lacking the tyrosine kinase domain [goid 1571] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FGFR5; FGFR5gamma; FGFR5beta	FGFR5; FGFR5gamma; FGFR5beta
Mus musculus	RefSeq	ILMN_199565	ILMN_251580	LOC625752	XM_890317.1	XM_890317.1		625752	82949721	XM_890317.1	LOC625752	XP_895410.1	ILMN_1233361	005720044	S	171	ACAGGCCAAGAACGCAAAGGCAGTGAGTGCGCACGCAGAGGCCATAAAGG	13	-	21388367-21388416	13qA3.1	PREDICTED: Mus musculus similar to 60S ribosomal protein L29 (P23) (LOC625752), mRNA.					
Mus musculus	RefSeq	ILMN_196625	ILMN_196625	D1LUB1	XM_142727.1	XM_142727.1			20969054	XM_142727.1	D1Lub1		ILMN_1228514	006250070	S	70	GCTGGCTACGGGAGTGACCAGAACTCCTTTGCTGCTATTTGTGCTTGGGC										
Mus musculus	RefSeq	ILMN_187978	ILMN_249922	2410004B18RIK	NM_025555.3	NM_025555.3		66421	146149159	NM_025555.3	2410004B18Rik	NP_079831.1	ILMN_2639035	003450309	S	646	ACGTATTTATGTTAACGAACTAATGAGTGTCGCCTCAAGACTTTCCACTG				3qH2	Mus musculus RIKEN cDNA 2410004B18 gene (2410004B18Rik), mRNA.				4930572C24Rik; MGC144272	4930572C24Rik; MGC144272
Mus musculus	Riken	ILMN_202609	ILMN_202609	ALS2	ri|9430073A21|PX00109N06|AK020484|1133					AK020484	Als2		ILMN_1230380	000610441	S	918	TGCCAGGCAGGAGAACTGAGAAGCAGTGCTACCTTAGCCAGCCATAGTTT						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [evidence IDA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process by which receptor molecules are returned to an active state and in an active cellular location after they have been stimulated by a ligand. An active state is when the receptor is ready to receive a signal [goid 1881] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence ISO]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence ISO]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence ISO]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence ISO]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISO]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence ISO]		
Mus musculus	RefSeq	ILMN_193348	ILMN_193348	TPO	NM_009417.2	NM_009417.2		22018	24475906	NM_009417.2	Tpo	NP_033443.1	ILMN_2496348	003060136	S	3140	CAAGGCTCTTTCAAATACACTCAGTTCTCTCGTTACGGTCCAGTCACCAC	12	-	30739618-30739667	12qA2	Mus musculus thyroid peroxidase (Tpo), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: iodide + H2O2 = iodine + 2 H2O [goid 4447] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221870	ILMN_221870	AA960436	NM_133954.1	NM_133954.1		101985	19527175	NM_133954.1	AA960436	NP_598715.1	ILMN_2741445	005340333	S	875	TGCCATCTGTGGGATGCCCCAGCCAGGAGTCCTAATCCCACACTTAGTAC	8	+	97870580-97870629	8qD1	Mus musculus expressed sequence AA960436 (AA960436), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_221870	ILMN_221870	AA960436	NM_133954.1	NM_133954.1		101985	19527175	NM_133954.1	AA960436	NP_598715.1	ILMN_3008733	007650612	S	1578	CCATCAAGCTCCTACCAGGGCAAAGAGCCAAACCTTTCTAGTTGTCATGG	8	+	97871283-97871332	8qD1	Mus musculus expressed sequence AA960436 (AA960436), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_208875	ILMN_208875	BCL2L13	NM_153516.2	NM_153516.2		94044	77404368	NM_153516.2	Bcl2l13	NP_705736.1	ILMN_1241307	003940017	S	2633	AGTGTCATCCTTTGGCTTACAGAATCAGTTGGGCCATAACCCTTATTCAG	6	+	120834603-120834652	6qF1	Mus musculus BCL2-like 13 (apoptosis facilitator) (Bcl2l13), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		BCL-RAMBO; E430016C20Rik; Mil-1; MGC38758; Mil1	BCL-RAMBO; E430016C20Rik; Mil-1; MGC38758; Mil1
Mus musculus	RefSeq	ILMN_202083	ILMN_208875	BCL2L13	NM_153516.2	NM_153516.2		94044	77404368	NM_153516.2	Bcl2l13	NP_705736.1	ILMN_1223268	000430040	S	6568	GTACTCGGGTGAAGGCAGGAAGACAATGTTCAAGGCCATACTAGGCTCAG	6	+	120838538-120838587	6qF1	Mus musculus BCL2-like 13 (apoptosis facilitator) (Bcl2l13), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		BCL-RAMBO; E430016C20Rik; Mil-1; MGC38758; Mil1	BCL-RAMBO; E430016C20Rik; Mil-1; MGC38758; Mil1
Mus musculus	MEEBO	ILMN_194407	ILMN_194407	2810436B12RIK	scl37424.1_235						2810436B12Rik		ILMN_2506162	003710672	S	17	ATCTTGCCAGTTTATTGAAGGTGCTTTTCAAGTTGTCAGCTTTGGGTAAC										
Mus musculus	RefSeq	ILMN_217714	ILMN_217714	MRPS7	NM_025305.1	NM_025305.1		50529	30794473	NM_025305.1	Mrps7	NP_079581.1	ILMN_2981818	000610626	S	1005	GAGCTCCTGCTGTCCTGTTGGAAAGTTCTGGAAGTTAAGGACGGAGAGTG	11	+	115423395-115423444	11qE2	Mus musculus mitchondrial ribosomal protein S7 (Mrps7), mRNA.	The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	Rpms7; MRP-S7	Rpms7; MRP-S7
Mus musculus	RefSeq	ILMN_217714	ILMN_217714	MRPS7	NM_025305.1	NM_025305.1		50529	30794473	NM_025305.1	Mrps7	NP_079581.1	ILMN_2981821	004560504	S	1095	CTCCATGCTGGCTAGAAGTTGGCCACAACTTGAGCAAAACTGCCTCTCAC	11	+	115423485-115423534	11qE2	Mus musculus mitchondrial ribosomal protein S7 (Mrps7), mRNA.	The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	Rpms7; MRP-S7	Rpms7; MRP-S7
Mus musculus	RefSeq	ILMN_215018	ILMN_215018	ZFP750	NM_178763.2	NM_178763.2		319530	31343422	NM_178763.2	Zfp750	NP_848878.1	ILMN_2654571	002370341	S	2722	TCCAAGACGGATGACTTACACTGGGACTTCATGTTTGTGACACACCAGGG	11	-	121327497-121327546	11qE2	Mus musculus zinc finger protein 750 (Zfp750), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	A030007D23Rik	A030007D23Rik
Mus musculus	RefSeq	ILMN_213954	ILMN_213954	PDLIM3	NM_016798.3	NM_016798.3		53318	133892778	NM_016798.3	Pdlim3	NP_058078.1	ILMN_1235230	000650452	S	1002	CCCCCAGAGGGCTACGACACCGTCACTCTGTACCCCAAAGCTTAAATCCT	8	+	47004324-47004368:47004369-47004373	8qB1.1	Mus musculus PDZ and LIM domain 3 (Pdlim3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IPI]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence TAS]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence TAS]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IPI]	AI463105; Actn2lp; ALP	AI463105; Actn2lp; ALP
Mus musculus	RefSeq	ILMN_185776	ILMN_257044	NOVA1	XM_979203.1	XM_979203.1		18134	94393917	XM_979203.1	Nova1	XP_984297.1	ILMN_2429898	001570463	S	1079	TTGTGAAATTTTAAGACAGAGTAATTCTTGAGATAATATAGGGAAATGGC					PREDICTED: Mus musculus neuro-oncological ventral antigen 1, transcript variant 2 (Nova1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IDA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]		
Mus musculus	RefSeq	ILMN_228609	ILMN_228609	DPYSL2	NM_009955.2	NM_009955.2		12934	40254594	NM_009955.2	Dpysl2	NP_034085.2	ILMN_2949596	001030435	S	4196	TGAACCCTTGAACCTGTGATTGTGACCCATGAGGGGGGACCTTTCAGTGC	14	-	67421887-67421936	14qD1	Mus musculus dihydropyrimidinase-like 2 (Dpysl2), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Crmp2; TOAD-64; Musunc33; DRP2; Ulip2; AI851130	Crmp2; TOAD-64; Musunc33; DRP2; Ulip2; AI851130
Mus musculus	RefSeq	ILMN_188287	ILMN_228609	DPYSL2	NM_009955.2	NM_009955.2		12934	40254594	NM_009955.2	Dpysl2	NP_034085.2	ILMN_2592538	004540168	S	1625	CAGGACGCTACATTCCCCGGAAGCCCTTCCCTGACTTTGTGTACAAACGC	14	-	67426717-67426766	14qD1	Mus musculus dihydropyrimidinase-like 2 (Dpysl2), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Crmp2; TOAD-64; Musunc33; DRP2; Ulip2; AI851130	Crmp2; TOAD-64; Musunc33; DRP2; Ulip2; AI851130
Mus musculus	RefSeq	ILMN_197137	ILMN_247187	LONRF2	NM_001029878.1	NM_001029878.1		381338	71274157	NM_001029878.1	Lonrf2	NP_001025049.1	ILMN_1250813	004540053	S	4254	GTCAGCTTCATCTGGCCCAAAGCTCCTCACCCTTACTTTCAAGGCCAAGG	1	-	38852127-38852176	1qB	Mus musculus LON peptidase N-terminal domain and ring finger 2 (Lonrf2), mRNA.				2900060P06Rik; AI851349	2900060P06Rik; AI851349
Mus musculus	RefSeq	ILMN_247187	ILMN_247187	LONRF2	NM_001029878.1	NM_001029878.1		381338	71274157	NM_001029878.1	Lonrf2	NP_001025049.1	ILMN_2848288	002600500	S	4826	GCAGGTGCAGCCTTGCTGGAGTATGCATGTCCCTGGGGGTGGACTTTTGA	1	-	38851555-38851604	1qB	Mus musculus LON peptidase N-terminal domain and ring finger 2 (Lonrf2), mRNA.				2900060P06Rik; AI851349	2900060P06Rik; AI851349
Mus musculus	RefSeq	ILMN_212532	ILMN_212532	PPP2R2B	NM_028392.2	NM_028392.2		72930	141803309	NM_028392.2	Ppp2r2b	NP_082668.1	ILMN_1229427	005550600	S	1797	GCCAACTGGCAGGAATTCTTCCATAGTCGACTTGAATTTCTGATGCGTTC	18	-	42805107-42805156	18qB3	Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform (Ppp2r2b), transcript variant 2, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]	MGC113781; 6330404L05Rik; E130009M08Rik; PR55-BETA; PP2A-PR55B; SCA12; 2900026H06Rik	MGC113781; 6330404L05Rik; E130009M08Rik; PR55-BETA; PP2A-PR55B; SCA12; 2900026H06Rik
Mus musculus	RefSeq	ILMN_213080	ILMN_213080	MCM3	NM_008563.2	NM_008563.2		17215	118130774	NM_008563.2	Mcm3	NP_032589.1	ILMN_2851040	007570014	S	1754	ACAGGAGTCAGCAGCCTACATTGCAGAAGAATACTCACGCCTGCGCAGCC	1	-	20798830-20798879	1qA4	Mus musculus minichromosome maintenance deficient 3 (S. cerevisiae) (Mcm3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	P1; Mcmd; C80350; p1.m; AL033361	P1; Mcmd; C80350; p1.m; AL033361
Mus musculus	RefSeq	ILMN_220178	ILMN_220178	LMAN1	NM_027400.2	NM_027400.2		70361	37537549	NM_027400.2	Lman1	NP_081676.1	ILMN_1212637	003170010	S	3275	GGAAGGCAGTGAACGCTTTAGTCATCAGGAACTTTGTGAGATCAGGGTGG	18	-	66140620-66140669	18qE1	Mus musculus lectin, mannose-binding, 1 (Lman1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence TAS]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	gp58; AU043785; MR60; MCFD1; 2610020P13Rik; C730041J05; F5F8D; P58; ERGIC53; AI326273	gp58; AU043785; MR60; MCFD1; 2610020P13Rik; C730041J05; F5F8D; P58; ERGIC53; AI326273
Mus musculus	RefSeq	ILMN_201139	ILMN_201139	LOC384859	XM_357900.1	XM_357900.1			38089411	XM_357900.1	LOC384859		ILMN_2541232	002490025	S	151	GTGGTTGTCATGGTGACCAAGGTAAAGGTGCTGAAGGAGAAGATAGAAGC										
Mus musculus	RefSeq	ILMN_194940	ILMN_316640	4930500O05RIK	NM_001085508.1	NM_001085508.1		242409	148227265	NM_001085508.1	4930500O05Rik	NP_001078977.1	ILMN_1234712	001230717	S	3157	CACCAGTATCCCTCTCATCTGGTCCCTGTGTTTAATTCCAAATACTCCCC					Mus musculus RIKEN cDNA 4930500O05 gene (4930500O05Rik), mRNA.					
Mus musculus	MEEBO	ILMN_214147	ILMN_214147	2010317E24RIK	scl072080.6_214	XM_130053.2			38074565	XM_130053.2	2010317E24Rik		ILMN_1218312	003180438	S	1505	TGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACTTGCCACTGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	MEEBO	ILMN_184674	ILMN_184674	GI_7839390_GB_AF247559.1_AF247559_747	gi_7839390_gb_AF247559.1_AF247559_747						gi_7839390_gb_AF247559.1_AF247559_747		ILMN_1242198	003360474	S	18	TGCATCTCCTCAGCAAGCACAAGAAGTCCATGTAGCTGTCCGCGGTTGGC										
Mus musculus	Riken	ILMN_206793	ILMN_206793	EPHA5	ri|E530015D21|PX00319A16|AK089143|3119					AK089143	Epha5		ILMN_1237026	002510524	S	2675	CTTGATACATTTAGTTCACTGCTCATCCACAGGAAAGGTAACAGGGTACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_222132	ILMN_222132	MTAP7D3	NM_177293.3	NM_177293.3		320923	144922675	NM_177293.3	Mtap7d3	NP_796267.2	ILMN_1242359	002340671	S	2704	CCAAGGCCAAGACTCAAAATTGTCTCCTTTTAGACTTGAACCTGGCAAAA	X	-	54051171-54051220	XqA5	Mus musculus MAP7 domain containing 3 (Mtap7d3), mRNA.				4933424A10Rik; RP23-71G11.2	4933424A10Rik; RP23-71G11.2
Mus musculus	Riken	ILMN_202087	ILMN_202087	2700032M20RIK	ri|2700032M20|ZX00063I12|AK012311|861					AK012311	2700032M20Rik		ILMN_1243445	005960202	S	2	AAAACTCCCGGAAGCGGTGTCCTGGTTGATAAGTGGTCTGCGGCGGCGAC										
Mus musculus	RefSeq	ILMN_222754	ILMN_222754	NR2C1	NM_011629.2	NM_011629.2		22025	31982759	NM_011629.2	Nr2c1	NP_035759.2	ILMN_2754266	002120097	S	2328	CGTACGGATCGACAGTGTTATCCCACACATTTTAAAAATGGAGCCTGCAG	10	+	93658011-93658060	10qC2	Mus musculus nuclear receptor subfamily 2, group C, member 1 (Nr2c1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tr2-11; 4831444H07Rik; Eenr; 80.3; TR2	Tr2-11; 4831444H07Rik; Eenr; 80.3; TR2
Mus musculus	RefSeq	ILMN_186375	ILMN_254738	SH3D19	XM_985031.1	XM_985031.1		27059	94370809	XM_985031.1	Sh3d19	XP_990125.1	ILMN_1228950	003390551	S	6660	GCCTATAGAAGTTGAAGGCTCACACAACTCATTAGAAAGAATCCCACAGG				3qF1	PREDICTED: Mus musculus SH3 domain protein D19, transcript variant 2 (Sh3d19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_206734	ILMN_206734	D230023E14RIK	ri|D230023E14|PX00188D01|AK084320|2990					AK084320	D230023E14Rik		ILMN_2582302	000630440	S	2463	TCATGGCTCACGAAGGATGACTGGAGCCAGGGGTGTGAACTCAGCCTGCT										
Mus musculus	Riken	ILMN_205259	ILMN_205259	E230025L24RIK	ri|E230025L24|PX00210O02|AK087615|2693					AK087615	E230025L24Rik		ILMN_2571195	000010491	S	2360	CCTGGGCTGCAGAGTTCCAGGCCAAGTAGGACTGACTACCTACCCAGTGA										
Mus musculus	RefSeq	ILMN_198064	ILMN_254910	EG231836	XM_917042.3	XM_917042.3		231836	149254448	XM_917042.3	EG231836	XP_922135.3	ILMN_1260002	005080079	S	2005	CTCCAAGATGGCCCCATTATGAACGTGTCACCCCCACCGACTGAGGAGAG				5qG2	PREDICTED: Mus musculus predicted gene, EG231836 (EG231836), mRNA.					
Mus musculus	RefSeq	ILMN_187571	ILMN_256377	SLCO1A1	NM_013797.1	NM_013797.1		28248	7305496	NM_013797.1	Slco1a1	NP_038825.1	ILMN_1224385	002750253	S	2871	GCCAGTTATTTCAAAGGTTCTCTTGTAAAGATGTAGTTGTTCCTCAGCTG	6	-	141870565-141870614	6qG2	Mus musculus solute carrier organic anion transporter family, member 1a1 (Slco1a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IDA]	Slc21a1; A530084B21; Oatp1	Slc21a1; A530084B21; Oatp1
Mus musculus	RefSeq	ILMN_217839	ILMN_317460	5830417I10RIK	XM_001478845.1	XM_001478845.1		76022	149251296	XM_001478845.1	5830417I10Rik	XP_001478895.1	ILMN_2688215	002630736	S	361	CAGTCTTGGAAGCCGTTGATGTAGCTGTCTCTCAGGAAATCCCCCTTCCC	3	+	88641206-88641255	3qF1	PREDICTED: Mus musculus RIKEN cDNA 5830417I10 gene (5830417I10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214516	ILMN_214516	DEFB6	NM_054074.1	NM_054074.1		116746	16905104	NM_054074.1	Defb6	NP_473415.1	ILMN_2854934	001780475	S	129	TGGAGGCTCATGCCAGCGTTCATGCAATGGAGGTTTTCGACTGGGTGGCC	8	+	19228015-19228064	8qA1.3	Mus musculus defensin beta 6 (Defb6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism [goid 50829] [evidence IDA]		mBD-6	mBD-6
Mus musculus	RefSeq	ILMN_220684	ILMN_220684	6330503C03RIK	NM_029528.2	NM_029528.2		76156	110625814	NM_029528.2	6330503C03Rik	NP_083804.2	ILMN_2869623	001820368	S	3911	GTCTTAGCCTTGGTTGGTGGAAGGAGCCCATGTTGGAGAAGGCCAGAGGC				6qB2.1	Mus musculus RIKEN cDNA 6330503C03 gene (6330503C03Rik), mRNA.				AV277466; 6530406I18Rik	AV277466; 6530406I18Rik
Mus musculus	Riken	ILMN_207290	ILMN_207290	PRKCH	ri|4732457K18|PX00637D08|AK076352|3057					AK076352	Prkch		ILMN_1216897	006590020	S	2895	GATATGATTGTCCTTGAGAATCTGCTGCACCACCCCTAGCAGACGCCTCC							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213118	ILMN_213118	TAGAP	NM_145968.1	NM_145968.1		72536	22165373	NM_145968.1	Tagap	NP_666080.1	ILMN_2879755	004920639	S	2697	GCAGGCTTGAGACGAGTCAGCATCATAGAAGGGAACAGACTGGAAGACAC	17	+	8127403-8127452	17qA1	Mus musculus T-cell activation Rho GTPase-activating protein (Tagap), mRNA.				2610315E15Rik; MGC31468	2610315E15Rik; MGC31468
Mus musculus	RefSeq	ILMN_213118	ILMN_213118	TAGAP	NM_145968.1	NM_145968.1		72536	22165373	NM_145968.1	Tagap	NP_666080.1	ILMN_2879759	000130138	S	2982	CCTCCTCCTTTAGACAGTTTATTACTTGCTGATGTTATATCCTTTGCCTC	17	+	8127688-8127737	17qA1	Mus musculus T-cell activation Rho GTPase-activating protein (Tagap), mRNA.				2610315E15Rik; MGC31468	2610315E15Rik; MGC31468
Mus musculus	RefSeq	ILMN_213118	ILMN_213118	TAGAP	NM_145968.1	NM_145968.1		72536	22165373	NM_145968.1	Tagap	NP_666080.1	ILMN_2700634	006180114	S	881	CGACCAGAGCCTGTCCTTCCAGGCCCAGAAGGACCTGAACAATAAGGTTA	17	+	8124387-8124432:8124996-8124999	17qA1	Mus musculus T-cell activation Rho GTPase-activating protein (Tagap), mRNA.				2610315E15Rik; MGC31468	2610315E15Rik; MGC31468
Mus musculus	RefSeq	ILMN_218660	ILMN_218660	RASD2	XM_204287.8	XM_204287.8		75141	149258925	XM_204287.8	Rasd2	XP_204287.7	ILMN_1223875	004590112	S	3062	GTCCATCCGGTCAAGCTCTACTGCCTGGACCTCTGTGTACACTATCAATT	8	+	77747940-77747989	8qC1	PREDICTED: Mus musculus RASD family, member 2 (Rasd2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISO]		
Mus musculus	RefSeq	ILMN_222315	ILMN_222315	SLC40A1	NM_016917.2	NM_016917.2		53945	124248584	NM_016917.2	Slc40a1	NP_058613.2	ILMN_2747923	002140221	S	3141	GGAGACTGACTGCCATGCATTGCTGTGAGCACTTTCTTTGTCGTTCAGTT	1	-	45965104-45965153	1qC1.1	Mus musculus solute carrier family 40 (iron-regulated transporter), member 1 (Slc40a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [evidence IDA]	MTP; IREG1; Slc39a1; Dusg; Fpn1; MTP1; Slc11a3; Ol5; Pcm	MTP; IREG1; Slc39a1; Dusg; Fpn1; MTP1; Slc11a3; Ol5; Pcm
Mus musculus	RefSeq	ILMN_223252	ILMN_223252	ALDH1A3	NM_053080.2	NM_053080.2		56847	31542122	NM_053080.2	Aldh1a3	NP_444310.2	ILMN_2761436	006420681	S	3282	CCCTGTGGTATGGTTTTTAAATCAATTGGATTGGGGATTTTGATCTTAAG	7	-	73535834-73535883	7qC	Mus musculus aldehyde dehydrogenase family 1, subfamily A3 (Aldh1a3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IGI]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina [goid 2072] [evidence IGI]; The progression of the nucleus accumbens over time from its initial formation until its mature state. The nucleus accumbens is a collection of pleomorphic cells in the caudal part of the anterior horn of the lateral ventricle, in the region of the olfactory tubercle, lying between the head of the caudate nucleus and the anterior perforated substance. It is part of the ventral striatum, a composite structure considered part of the basal ganglia [goid 21768] [evidence IMP]; The biological process whose specific outcome is the progression of the olfactory pit from an initial condition to its mature state. This process begins with the formation of the olfactory pit, which is an indentation of the olfactory placode, and ends when the pits hollows out to form the nasopharynx [goid 60166] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]	RALDH3; ALDH6; V1	RALDH3; ALDH6; V1
Mus musculus	MEEBO	ILMN_194087	ILMN_194087	IGKV8-31_AJ235957_IG_KAPPA_VARIABLE_8-31_3	IGKV8-31_AJ235957_Ig_kappa_variable_8-31_3						IGKV8-31_AJ235957_Ig_kappa_variable_8-31_3		ILMN_2503275	000610592	S	19	CTGCTATGGGTATCTGGTACCTGTGGGGACATTGTGATGTCTCAGTCTCC										
Mus musculus	MEEBO	ILMN_223282	ILMN_223282	FEZ2	scl49610.9.216_11	NM_199448.1			40789097	NM_199448.1	Fez2		ILMN_2761876	002140059	S	1329	GAGGGACATGAATCGTGCATGTTGTTGTTTTTGACAGTGTGGCTGTCAGT								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_219179	ILMN_261000	USP14	NM_001038589.2	NM_001038589.2		59025	95113658	NM_001038589.2	Usp14	NP_001033678.1	ILMN_2705305	004480386	S	2642	GATTGCTAAAGTTCCTGAAACATCTAAGGACTTACTCACTGGGTAGTCAA	18	-	9995001-9995050	18qA1	Mus musculus ubiquitin specific peptidase 14 (Usp14), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	ax; C78769; AW107924; 2610005K12Rik	ax; C78769; AW107924; 2610005K12Rik
Mus musculus	RefSeq	ILMN_240052	ILMN_240052	MSX3	NM_010836.1	NM_010836.1		17703	6754755	NM_010836.1	Msx3	NP_034966.1	ILMN_2926942	002940113	S	1983	GACTGGGCTATCTCGGCAGTCCAAGCCACGTCCAGGAAAACTGCTGTCCC	7	-	139897732-139897781	7qF4	Mus musculus homeo box, msh-like 3 (Msx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35067] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI323377	AI323377
Mus musculus	RefSeq	ILMN_194375	ILMN_329235	LOC100044275	XM_001471479.1	XM_001471479.1		100044275	149258201	XM_001471479.1	LOC100044275	XP_001471529.1	ILMN_1253678	004050593	S	4008	GAACAATGTGTACCATGAAACTCACACCTTGGCTTTCTTTGAAAATGGTC					PREDICTED: Mus musculus hypothetical protein LOC100044275 (LOC100044275), mRNA.					
Mus musculus	Riken	ILMN_207239	ILMN_207239	G430064M09RIK	ri|G430064M09|PH00001N17|AK090023|2228					AK090023	G430064M09Rik		ILMN_1230316	000020575	S	1977	TCTGAGGAGAAATGACACCCGAGACTGATCTCTGGCCCCCAGAAGCACAC										
Mus musculus	RefSeq	ILMN_210353	ILMN_210353	ANKAR	NM_176980.2	NM_176980.2		319695	31342514	NM_176980.2	Ankar	NP_795954.1	ILMN_2974016	005900482	S	4433	TTTGAACAAACTTGGGAAAGATGAACAGAAAGCCAACCCAGACCCTCCAG	1	-	72576277-72576326	1qC3	Mus musculus ankyrin and armadillo repeat containing (Ankar), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4932422E22Rik	4932422E22Rik
Mus musculus	Riken	ILMN_203600	ILMN_203600	A430110O13RIK	ri|A430110O13|PX00065B10|AK040635|2733					AK040635	A430110O13Rik		ILMN_1233378	003990647	S	1552	AGAGGCAACAGGTGATGCCACCCACAGGAGGGATGCCCCCAACTCCTCAG										
Mus musculus	RefSeq	ILMN_214116	ILMN_214116	DRD5	NM_013503.2	NM_013503.2		13492	142371845	NM_013503.2	Drd5	NP_038531.1	ILMN_2644432	005870474	S	2689	CTTGCAGGGTTAGGGGCTCACGGAGGAGCCCACCTGTCTTTTTGCTTTCC	5	+	38713436-38713485	5qB3	Mus musculus dopamine receptor 5 (Drd5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The portion of the plasma membrane surrounding the brush border [goid 31526] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence ISO]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; A process that results in a decrease in the diameter of an artery during the norepinephrine-epinephrine response to decreased blood pressure [goid 1994] [evidence IMP]; The regulation of blood pressure mediated by the signaling molecule vasopressin. Vasopressin is produced in the hypothalamus, and affects vasoconstriction, and renal water transport [goid 1992] [evidence IGI]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant [goid 42220] [evidence IMP]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; Any process that modulates the frequency, rate or extent of the willingness or readiness of a female to receive male advances [goid 45924] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence ISO]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D5 receptors [goid 1589] [evidence IDA]	Gpcr1; Drd1b; Drd-5	Gpcr1; Drd1b; Drd-5
Mus musculus	RefSeq	ILMN_214469	ILMN_214469	H3F3B	NM_008211.3	NM_008211.3		15081	116089277	NM_008211.3	H3f3b	NP_032237.1	ILMN_2648292	001980561	S	1466	ATAAACATGGGAGTAAGAACACAGCTTCAACTTCTTGGACCTCTGCCAAT	11	-	115883752-115883801	11qE2	Mus musculus H3 histone, family 3B (H3f3b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	9430068D06Rik; H3.3B	9430068D06Rik; H3.3B
Mus musculus	RefSeq	ILMN_219888	ILMN_240077	ABCB5	XM_001002680.2	XM_001002680.2		77706	149263568	XM_001002680.2	Abcb5	XP_001002680.2	ILMN_2714828	007510382	S	785	GCAAGGAGCTGGATGCCTATTCCAAAGCTGGGGCTGTGGCTGAAGAAGCC	12	-	120174736-120174785	12qF2	PREDICTED: Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 5 (Abcb5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198911	ILMN_257164	LOC236466	XR_004196.1	XR_004196.1		236466	94420126	XR_004196.1	LOC236466		ILMN_1256446	002900324	S	783	AGGACCACACGGACAGACTCCTGGTTACAGCCGGGAATCATTGTGAAACG					PREDICTED: Mus musculus hypothetical LOC236466 (LOC236466), mRNA.					
Mus musculus	RefSeq	ILMN_201007	ILMN_201007	LOC382297	XM_356416.1	XM_356416.1			38087895	XM_356416.1	LOC382297		ILMN_2540775	002690615	S	914	ATAGGTTCCTGGGTGCAGTACACCAGAGATGATGGATCCAAAAAGTTTAG										
Mus musculus	Riken	ILMN_202935	ILMN_202935	BPGM	ri|A030012J18|PX00063H17|AK037239|1862					AK037239	Bpgm		ILMN_2553448	003060575	S	1251	GCCGTTTTCCAGACCAGGCTTAGTCACTGCTTATGAGAATGCTAGAGGGG							The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IEA]; Catalysis of the reaction: 2,3-diphosphoglycerate + H2O = 3-phosphoglycerate + phosphate [goid 4083] [evidence IEA]; Catalysis of the reaction: 2-phospho-D-glycerate = 3-phospho-D-glycerate [goid 4619] [evidence IEA]; Catalysis of the reaction: 3-phospho-D-glyceroyl phosphate = 2,3-bisphospho-D-glycerate [goid 4082] [evidence IEA]		
Mus musculus	Riken	ILMN_206573	ILMN_206573	SOX8	ri|E130302F01|PX00092L23|AK087471|1980					AK087471	Sox8		ILMN_1259039	005810743	S	1867	TCCAGGACCCTTAGCATGGGGGACGGGCAATAGCAGGACTGATCTGGAGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217689	ILMN_217689	SPATA16	NM_027583.1	NM_027583.1		70862	21312343	NM_027583.1	Spata16	NP_081859.1	ILMN_1236529	005550196	S	1709	CATCTTATCCTCCGAGAAAATGTCTACCTTGGGTCAAATCTGTCTAGAAG	3	+	26826338-26826387	3qA3	Mus musculus spermatogenesis associated 16 (Spata16), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4921511F01Rik; Nyd-sp12; 4930503K02Rik	4921511F01Rik; Nyd-sp12; 4930503K02Rik
Mus musculus	RefSeq	ILMN_222257	ILMN_222257	SYTL5	NM_177704.2	NM_177704.2		236643	31343248	NM_177704.2	Sytl5	NP_808372.1	ILMN_2747006	007550307	S	2166	CTACGGTAAAACTGTGGACTGGATGGACTCTCATGGGGAAGAGCAACGCC	X	+	9571534-9571583	XqA1.1	Mus musculus synaptotagmin-like 5 (Sytl5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	slp5	slp5
Mus musculus	RefSeq	ILMN_204966	ILMN_236880	CLASP1	XM_922009.2	XM_922009.2		76707	94364133	XM_922009.2	Clasp1	XP_927102.1	ILMN_1225769	000010328	S	3864	GCAGCCCAATGTTCGTTACCGCTTTACCGCTGGAGATGACAGCCACAGGG				1qE2.3	PREDICTED: Mus musculus CLIP associating protein 1, transcript variant 21 (Clasp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186165	ILMN_186165	4933439C10RIK	scl074476.3_29						4933439C10Rik		ILMN_2433166	004540451	S	3	CACCGGCAGACTTCGTGCTTCCGTTTCCTTCTAATAATTGGGACTGGGAC										
Mus musculus	Riken	ILMN_207401	ILMN_207401	SFXN3	ri|G430044L04|PH00001C10|AK089985|2326					AK089985	Sfxn3		ILMN_1216734	006250195	S	1818	GCTGGTGTGGGAGCGGTGCCTTAAACACAGGCCTCAAGCGTACAGTATCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185061	ILMN_228863	CDH13	NM_019707.2	NM_019707.2		12554	110625608	NM_019707.2	Cdh13	NP_062681.2	ILMN_2423843	001050504	S	3331	CGGCTCCCACTAGGGTAACCTTCCCATTGACAAACCGTAAATGAACCATC				8qE1	Mus musculus cadherin 13 (Cdh13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with adiponectin, a protein hormone produced by adipose tissue that modulates a number of metabolic processes, including glucose regulation and fatty acid catabolism [goid 55100] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	4932416G01Rik; Cdht; T-cadherin; Tcad	4932416G01Rik; Cdht; T-cadherin; Tcad
Mus musculus	Riken	ILMN_206447	ILMN_206447	C230064B05RIK	ri|C230064B05|PX00176A13|AK082562|2328					AK082562	C230064B05Rik		ILMN_1241978	002100458	S	2172	CACCACAGTCAAGATACCCACTCAAGGGTGTGATGATGCAGGCTTGTCGT										
Mus musculus	RefSeq	ILMN_198450	ILMN_198450	LOC381231	XM_355168.1	XM_355168.1			38085192	XM_355168.1	LOC381231		ILMN_1236229	004850228	S	319	CAGGGAAAGAGAGCAAGAAGCAAGAGAGCGAAAAACGAAAACCCCGTCCC										
Mus musculus	Riken	ILMN_202419	ILMN_202419	CCND2	ri|1810059D21|ZX00043E14|AK007904|1007					AK007904	Ccnd2		ILMN_1235724	005690215	S	800	GGAAATTCATGAGGGTGAAATTCTGTTGTGTGTGTGGGTGGGGGGGGGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217754	ILMN_217754	RXFP3	NM_178717.3	NM_178717.3		239336	142386187	NM_178717.3	Rxfp3	NP_848832.1	ILMN_1240943	000870678	S	3580	CACGCCTGCCATCAAAGCCATGCTTTCTGCCATATAGTAGTTACACTCAG	15	-	10964094-10964143	15qA1	Mus musculus relaxin family peptide receptor 3 (Rxfp3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IDA]; Combining with an N-formyl peptide to initiate a change in cell activity [goid 4982] [evidence IEA]	BC053073; GPCR135; Rln3r1; Salpr	BC053073; GPCR135; Rln3r1; Salpr
Mus musculus	RefSeq	ILMN_210811	ILMN_244745	ST3GAL1	NM_009177.4	NM_009177.4		20442	113681284	NM_009177.4	St3gal1	NP_033203.1	ILMN_1224619	005490008	S	2246	CCTAGCTGGGGAAAAGCGAGCCAATACCAGGAAAGGTCTAGCCTCCAAAC	15	-	66937925-66937974	15qD2	Mus musculus ST3 beta-galactoside alpha-2,3-sialyltransferase 1 (St3gal1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,3-N-acetyl-alpha-D-galactosaminyl-R = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-N-acetyl-alpha-D-galactosaminyl-R [goid 3836] [evidence IEA]	Siat4; MGC90735; 5330418N22Rik; AI467004; ST3GalI; Siat4a; St3gal-1	Siat4; MGC90735; 5330418N22Rik; AI467004; ST3GalI; Siat4a; St3gal-1
Mus musculus	RefSeq	ILMN_210811	ILMN_244745	ST3GAL1	NM_009177.4	NM_009177.4		20442	113681284	NM_009177.4	St3gal1	NP_033203.1	ILMN_2749178	005360500	S	771	CCTCGTGTGCCACACAGCAATGTCGAGAACACAAACCTAGGCGTGTCTCC	15	-	66945533-66945582	15qD2	Mus musculus ST3 beta-galactoside alpha-2,3-sialyltransferase 1 (St3gal1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,3-N-acetyl-alpha-D-galactosaminyl-R = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-N-acetyl-alpha-D-galactosaminyl-R [goid 3836] [evidence IEA]	Siat4; MGC90735; 5330418N22Rik; AI467004; ST3GalI; Siat4a; St3gal-1	Siat4; MGC90735; 5330418N22Rik; AI467004; ST3GalI; Siat4a; St3gal-1
Mus musculus	RefSeq	ILMN_210811	ILMN_244745	ST3GAL1	NM_009177.4	NM_009177.4		20442	113681284	NM_009177.4	St3gal1	NP_033203.1	ILMN_1220927	007160288	S	3576	GGGCTGTTCACAGACATCACCAAAGAGCAGACACTAAGACTGTCATTTCC	15	-	66936595-66936644	15qD2	Mus musculus ST3 beta-galactoside alpha-2,3-sialyltransferase 1 (St3gal1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,3-N-acetyl-alpha-D-galactosaminyl-R = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-N-acetyl-alpha-D-galactosaminyl-R [goid 3836] [evidence IEA]	Siat4; MGC90735; 5330418N22Rik; AI467004; ST3GalI; Siat4a; St3gal-1	Siat4; MGC90735; 5330418N22Rik; AI467004; ST3GalI; Siat4a; St3gal-1
Mus musculus	RefSeq	ILMN_246037	ILMN_246037	RABGAP1	NM_001033960.1	NM_001033960.1		227800	76880497	NM_001033960.1	Rabgap1	NP_001029132.1	ILMN_3061848	002370647	I	3325	CCAGTCTAGAGGTTGTCTCTGTGAGGTAGTATGCACACAGGTTCTACACA	2	+	37399569-37399618	2qB	Mus musculus RAB GTPase activating protein 1 (Rabgap1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	Gapcena; KIAA4104; mKIAA4104; MGC30493	Gapcena; KIAA4104; mKIAA4104; MGC30493
Mus musculus	RefSeq	ILMN_246037	ILMN_246037	RABGAP1	NM_001033960.1	NM_001033960.1		227800	76880497	NM_001033960.1	Rabgap1	NP_001029132.1	ILMN_3061844	002650047	I	4055	GATTGTTCACAACATGCCAGATGCCCTGGCTAAGTGTTTCTATATGTGGG	2	+	37400299-37400348	2qB	Mus musculus RAB GTPase activating protein 1 (Rabgap1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	Gapcena; KIAA4104; mKIAA4104; MGC30493	Gapcena; KIAA4104; mKIAA4104; MGC30493
Mus musculus	RefSeq	ILMN_246037	ILMN_246037	RABGAP1	NM_001033960.1	NM_001033960.1		227800	76880497	NM_001033960.1	Rabgap1	NP_001029132.1	ILMN_3139344	000940414	A	2031	GGCCAGTCCTTCCTCGCAGCTGTACTGCTTCTCCACATGCCCGAAGAACA	2	+	37392861-37392896:37395937-37395950	2qB	Mus musculus RAB GTPase activating protein 1 (Rabgap1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	Gapcena; KIAA4104; mKIAA4104; MGC30493	Gapcena; KIAA4104; mKIAA4104; MGC30493
Mus musculus	RefSeq	ILMN_207455	ILMN_207455	ING4	NM_133345.1	NM_133345.1		28019	19111151	NM_133345.1	Ing4	NP_579923.1	ILMN_2652575	000150730	S	1213	GGCAGTGGCCTAGTTAAGTGGTTACTCCAACCTCTATGGCCCGGGGATTT	6	+	125014479-125014528	6qF2	Mus musculus inhibitor of growth family, member 4 (Ing4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D6Wsu147e; D6Xrf92; p29ING4	D6Wsu147e; D6Xrf92; p29ING4
Mus musculus	RefSeq	ILMN_185940	ILMN_185940	ZFY2	NM_009571.2	NM_009571.2		22768	121247375	NM_009571.2	Zfy2	NP_033597.2	ILMN_1257342	007320484	S	343	GTAAGAACTAAAGGCCATGGATGAAGATGAAATTGAATTGACCCCAGAAG	Y	-	1389359-1389393:1389394-1389408	YqA1	Mus musculus zinc finger protein 2, Y linked (Zfy2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfy-2	Zfy-2
Mus musculus	RefSeq	ILMN_185914	ILMN_185914	ZFP119	NM_144546.3	NM_144546.3		104349	46810285	NM_144546.3	Zfp119	NP_653129.1	ILMN_2907989	003120523	S	1729	GAGGAATAGTCTTGGGTAACACACTCATTTCCCCCACTGAGCTCTCTCAC	17	-	55458289-55458338	17qD	Mus musculus zinc finger protein 119 (Zfp119), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mzf13; AL024077	Mzf13; AL024077
Mus musculus	RefSeq	ILMN_211044	ILMN_251784	DDAH2	NM_016765.2	NM_016765.2		51793	118131165	NM_016765.2	Ddah2	NP_058045.1	ILMN_2770183	005340431	S	1100	TAGAGCTGTATAGTGGGTAGAATCAGCTAATAGAGGCTGGGTAGTTGTGG	17	+	35198099-35198148	17qB1	Mus musculus dimethylarginine dimethylaminohydrolase 2 (Ddah2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6527] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2 [goid 16813] [evidence IEA]; Catalysis of the reaction: N(G),N(G)-dimethyl-L-arginine + H2O = dimethylamine + L-citrulline [goid 16403] [evidence IEA]	1110003M04Rik; Ddah; AW413173; AU019324; NG30; G6a	1110003M04Rik; Ddah; AW413173; AU019324; NG30; G6a
Mus musculus	Riken	ILMN_204548	ILMN_204548	B930002D24RIK	ri|B930002D24|PX00162E08|AK046912|2569					AK046912	B930002D24Rik		ILMN_2565820	000430524	S	2141	CTGTGACATCATCATGAAGGTGAGGTAGGCTGGCGATCAGCACTGTATTG										
Mus musculus	RefSeq	ILMN_194267	ILMN_230757	NOTUM	NM_175263.3	NM_175263.3		77583	125858487	NM_175263.3	Notum	NP_780472.2	ILMN_2504886	007650301	S	1343	CGGAGCTTCCATGACAGCCATAAGGCCAGCAAAACCCCCATGAAGGGCTG	11	-	120515729-120515778	11qE2	Mus musculus notum pectinacetylesterase homolog (Drosophila) (Notum), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	5730593N15Rik	5730593N15Rik
Mus musculus	RefSeq	ILMN_230757	ILMN_230757	NOTUM	NM_175263.3	NM_175263.3		77583	125858487	NM_175263.3	Notum	NP_780472.2	ILMN_2932164	001820433	S	1842	TCAGCGCAGACAGTCCCTCCCAGCCCCCACTGATCATGTTCGTTTGTATT	11	-	120515230-120515279	11qE2	Mus musculus notum pectinacetylesterase homolog (Drosophila) (Notum), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	5730593N15Rik	5730593N15Rik
Mus musculus	MEEBO	ILMN_209764	ILMN_209764	9530043G02RIK	scl25005.1.1_55	NM_175426.2			31341869	NM_175426.2	9530043G02Rik		ILMN_2598999	005260400	S	1072	GCATCTTGCTGGAGTTGAGGGGGTGGGATGAGGCAGAACATAAGTAGAAC										
Mus musculus	RefSeq	ILMN_223244	ILMN_226384	2200002K05RIK	NM_026955.2	NM_026955.2		69137	142348823	NM_026955.2	2200002K05Rik	NP_081231.1	ILMN_1256157	006860563	S	1598	GCCAGTATTAGCCTAGATCTCTCAGAGGCATTAAGCAAAGCAAGCGAGGG	9	+	15063467-15063516	9qA2	Mus musculus RIKEN cDNA 2200002K05 gene (2200002K05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_190245	ILMN_233009	GATAD2B	NM_139304.1	NM_139304.1		229542	21314853	NM_139304.1	Gatad2b	NP_647465.1	ILMN_1251852	006400086	S	1749	GATCCCTCCCAGGTCTATATCGCAGTCCATCAGTGGGCAGAAATAACGCC	3	+	90161885-90161924:90161925-90161934	3qF1	Mus musculus GATA zinc finger domain containing 2B (Gatad2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	P66beta; AL118180; KIAA1150; C430014D17Rik; mKIAA1150	P66beta; AL118180; KIAA1150; C430014D17Rik; mKIAA1150
Mus musculus	Riken	ILMN_202719	ILMN_202719	TSGA14	ri|2810431D15|ZX00046H08|AK019270|485					AK019270	Tsga14		ILMN_2551744	001780438	S	256	CTTCCTCACTCACACAGATGCAAACGTTTGTAGTGGACCAGATTTGCACG							The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186703	ILMN_186703	TXNDC2	NM_153519.1	NM_153519.1		213272	23943823	NM_153519.1	Txndc2	NP_705739.1	ILMN_1242281	000610673	S	1530	GCACGAGGATGTGATATTCTTGGAGGTGGACACTGAGGATTGTGAGCAGC	17	-	65986992-65987041	17qE1.1	Mus musculus thioredoxin domain containing 2 (spermatozoa) (Txndc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Oxidation of two organic sulfhydryl groups (thiols) by a disulfide compound to form a disulfide bond [goid 6467] [evidence IDA]		Sptrx-1; AU021712; Trx4; Sptrx1	Sptrx-1; AU021712; Trx4; Sptrx1
Mus musculus	RefSeq	ILMN_215640	ILMN_215640	CHRM5	NM_205783.1	NM_205783.1		213788	45429982	NM_205783.1	Chrm5	NP_991352.1	ILMN_2661904	002710487	S	1290	GAGAATGGTCCTAGTCAAAGAGAGGAAAGCGGCGCAGACCTTGAGCGCCA	2	-	112319587-112319636	2qE3	Mus musculus cholinergic receptor, muscarinic 5 (Chrm5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IDA]; The directed movement of dopamine into, out of, within or between cells. Dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 15872] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4981] [evidence IEA];  [goid 4891] [evidence TAS]	M5R; m5	M5R; m5
Mus musculus	Riken	ILMN_203077	ILMN_203077	A430061O19RIK	ri|A430061O19|PX00136D04|AK040106|1046					AK040106	A430061O19Rik		ILMN_1252927	002070414	S	894	AGGGCTATAGGTATGGCTCCATGGTAAAGGACTTGCCTGTCGTGTGGGGG										
Mus musculus	RefSeq	ILMN_186554	ILMN_231915	CLCA3	NM_017474.1	NM_017474.1		23844	8567335	NM_017474.1	Clca3	NP_059502.1	ILMN_2690676	003130196	S	2576	AGAAATCTCCAACATTGCACGGGTGTCTGTGTTCATCCCCGCTCAGGAGC	3	-	144667793-144667842	3qH2	Mus musculus chloride channel calcium activated 3 (Clca3), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence ISA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence ISA]	gob-5; MGC143985; Clca2; gob5; MGC143984	gob-5; MGC143985; Clca2; gob5; MGC143984
Mus musculus	Riken	ILMN_205623	ILMN_205623	D230004N01RIK	ri|D230004N01|PX00187B24|AK051815|1580					AK051815	D230004N01Rik		ILMN_1258197	002570544	S	1417	CTGAGACTGAGCCCCGCTGGTCTTCTGGGAAAGGTGGAAAAGCTGTTGGA										
Mus musculus	RefSeq	ILMN_198597	ILMN_311711	EG245440	XM_001473465.1	XM_001473465.1		245440	149271653	XM_001473465.1	EG245440	XP_001473515.1	ILMN_1220809	002490121	S	1264	GAAGCATTCAGAGATGAGGAAGGGAGAGCCGGAGTTGGCCCCTTGGCTTA	X	+	58545241-58545290	XqA6	PREDICTED: Mus musculus predicted gene, EG245440 (EG245440), mRNA.					
Mus musculus	MEEBO	ILMN_187967	ILMN_187967	4930430F08RIK	scl5681.1.1_175				28201990	NM_175128	4930430F08Rik		ILMN_1232440	004480100	S	1	GCTTACAGCATCTACACAGACCAGTGACGAGCAGCCAGACCACTAAATGA										
Mus musculus	MEEBO	ILMN_187967	ILMN_187967	4930430F08RIK	scl5681.1.1_175				28201990	NM_175128	4930430F08Rik		ILMN_2448689	000940142	S	20	GCGAGGCTACAGAGCATGCGCCTCCACATGCGTGATTCCCCTGTGTTTTG										
Mus musculus	RefSeq	ILMN_217306	ILMN_217306	C730027P07RIK	NM_177743.3	NM_177743.3		245050	142386694	NM_177743.3	C730027P07Rik	NP_808411.1	ILMN_2681690	005270364	S	1763	GTCGGGGACAGATCCTGCTGAGACACATTAAGAAGCACAACCTCACACTG	9	+	121887480-121887529	9qF4	Mus musculus RIKEN cDNA C730027P07 gene (C730027P07Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC130602	MGC130602
Mus musculus	Riken	ILMN_202056	ILMN_202056	IGF2BP3	ri|2610101N11|ZX00061C23|AK011797|712					AK011797	Igf2bp3		ILMN_1259757	007100152	S	549	CAAAGAGCTGTGTAGCACAATTCACTAGCCCGAGTCAGCAGTTTCCACAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221507	ILMN_221507	GALNTL4	NM_173739.3	NM_173739.3		233733	32129254	NM_173739.3	Galntl4	NP_776100.2	ILMN_2736514	007570360	S	2306	ACAGGCGCCACCGGCCACCGCTTTGCTACTGTGTAGCATCAGCTGCAATG	7	-	118615394-118615443	7qF1	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4 (Galntl4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	2900011G21Rik; MGC32465; BC024988	2900011G21Rik; MGC32465; BC024988
Mus musculus	RefSeq	ILMN_187809	ILMN_257704	SORBS1	NM_009166.3	NM_009166.3		20411	118130498	NM_009166.3	Sorbs1	NP_033192.2	ILMN_1252470	004250373	S	2495	CGGAGGATGAAGCATCATTCATGAACTGGTCTCTTTATTTAAGTACTGAG	19	-	40369456-40369505	19qC3	Mus musculus sorbin and SH3 domain containing 1 (Sorbs1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; An adherens junction which connects a cell to the extracellular matrix [goid 5924] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts [goid 43149] [evidence IDA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the insulin receptor [goid 5158] [evidence IDA]	SH3P12; 2310065E01Rik; Sh3d5; mKIAA1296; CAP; 9530001P15Rik	SH3P12; 2310065E01Rik; Sh3d5; mKIAA1296; CAP; 9530001P15Rik
Mus musculus	RefSeq	ILMN_187809	ILMN_257704	SORBS1	NM_009166.3	NM_009166.3		20411	118130498	NM_009166.3	Sorbs1	NP_033192.2	ILMN_1255551	006660220	S	4463	GCCAGCCACGGCTAGTGCGATTGTATCTAAATTTCCTGAGGGGTGTTTTT	19	-	40367488-40367537	19qC3	Mus musculus sorbin and SH3 domain containing 1 (Sorbs1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; An adherens junction which connects a cell to the extracellular matrix [goid 5924] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts [goid 43149] [evidence IDA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the insulin receptor [goid 5158] [evidence IDA]	SH3P12; 2310065E01Rik; Sh3d5; mKIAA1296; CAP; 9530001P15Rik	SH3P12; 2310065E01Rik; Sh3d5; mKIAA1296; CAP; 9530001P15Rik
Mus musculus	RefSeq	ILMN_197268	ILMN_197268	LOC238689	XM_138684.2	XM_138684.2			38074898	XM_138684.2	LOC238689		ILMN_1256597	000050095	S	601	AAGGGCCTGAAGCCCTGGCCCTTCAGCAATGCTGACGTAGACATTTGCCT										
Mus musculus	RefSeq	ILMN_218218	ILMN_218218	SLC18A3	NM_021712.2	NM_021712.2		20508	83716010	NM_021712.2	Slc18a3	NP_068358.2	ILMN_1247491	000620338	S	1718	CCTACGCTCTCGGGCCCATAGTAGCAGGCCATATCGTTCACTCACTTGGC	14	-	33276269-33276318	14qB	Mus musculus solute carrier family 18 (vesicular monoamine), member 3 (Slc18a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of the membrane to the other [goid 8504] [evidence TAS]	VAT; VAChT	VAT; VAChT
Mus musculus	RefSeq	ILMN_209398	ILMN_209398	PAFAH1B1	NM_013625.1	NM_013625.1		18472	7305362	NM_013625.1	Pafah1b1	NP_038653.1	ILMN_2640401	005050500	S	1906	GGGAAGTTTATTTTGAGTTGTGCTGATGACAAGACCCTCCGTGTATGGGA	11	-	74495706-74495755	11qB5	Mus musculus platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit (Pafah1b1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; The area of a motile cell closest to the direction of movement [goid 31252] [evidence IDA]; A specialized primary cilium that contains a 9 + 0 arrangement of microtubules, radial spokes, and a dynein apparatus, but no inner doublet microtubules. Motile primary cilia display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface [goid 31512] [evidence IDA]; An immotile primary cilium that may be missing the central pair of microtubules, or the central pair of microtubules and outer dynein arms. Some primary cilia also have altered arrangements of outer microtubules (fewer than nine and/or not always present as doublets). Nonmotile primary cilia typically function as sensory organelles that concentrate and organize sensory signaling molecules [goid 31513] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IGI]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; Any process that modulates the activity of a GTPase of the Rho family [goid 32319] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IGI]; The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IDA]; The formation of the acrosome from the spermatid Golgi [goid 1675] [evidence IMP]; The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IGI]; The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex [goid 21819] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a phosphorylated protein [goid 51219] [evidence IPI]	Mdsh; LIS-1; Pafaha; MGC25297; MMS10-U; Ms10u; Lis1	Mdsh; LIS-1; Pafaha; MGC25297; MMS10-U; Ms10u; Lis1
Mus musculus	RefSeq	ILMN_218892	ILMN_237651	PRKAA1	NM_001013367.3	NM_001013367.3		105787	94681060	NM_001013367.3	Prkaa1	NP_001013385.3	ILMN_1233439	006510408	S	3677	CTGTTGGGGGGACGGGGCACAAAAGGAGGAGCCAACTAAATAGGACCTTC	15	+	5130921-5130970	15qA1	Mus musculus protein kinase, AMP-activated, alpha 1 catalytic subunit (Prkaa1), mRNA.		The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The removal of one or more electrons from a fatty acid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen [goid 19395] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI194361; C130083N04Rik; AI450832; AL024255	AI194361; C130083N04Rik; AI450832; AL024255
Mus musculus	RefSeq	ILMN_217154	ILMN_217154	AQP5	NM_009701.4	NM_009701.4		11830	117940061	NM_009701.4	Aqp5	NP_033831.1	ILMN_3115472	001510373	A	1364	CTCATGTGCCAAAGCCTTCCCCCAGGTAGACAGAGGGGACATTGCCTGAG	15	+	99425073-99425122	15qF1	Mus musculus aquaporin 5 (Aqp5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]		
Mus musculus	RefSeq	ILMN_208882	ILMN_208882	APOC1	NM_007469.3	NM_007469.3		11812	141802164	NM_007469.3	Apoc1	NP_031495.1	ILMN_1228469	005820600	S	175	GCCCAGGCGGCCCCGGATTTGTCCGGAACATTGGAGAGCATACCGGATAA	7	-	20277323-20277372	7qA3	Mus musculus apolipoprotein C-I (Apoc1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208882	ILMN_208882	APOC1	NM_007469.3	NM_007469.3		11812	141802164	NM_007469.3	Apoc1	NP_031495.1	ILMN_2599794	001710066	S	337	AAAGTGAAGGAGAAGTTGAAGACCACGTTCTCCTGAGCACCTGGCGGGCC	7	-	20274910-20274924:20274925-20274959	7qA3	Mus musculus apolipoprotein C-I (Apoc1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]		
Mus musculus	Riken	ILMN_204291	ILMN_204291	9630028G16RIK	ri|9630028G16|PX00116I01|AK036031|1449					AK036031	9630028G16Rik		ILMN_2563855	004290376	S	1069	GGCTTGTGCCACCACGCCCGGCTTTGTGTTGATTTTGTTAACAGGTATTA										
Mus musculus	RefSeq	ILMN_220861	ILMN_220861	KCNA2	NM_008417.3	NM_008417.3		16490	142369063	NM_008417.3	Kcna2	NP_032443.2	ILMN_2727857	000940424	S	3395	GTGGGCATGACTACACAGCTTACCAGGGTCCTGAAGACAGGCAGGTCTGT	3	+	106909736-106909785	3qF2.3	Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 2 (Kcna2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Kca1-2; Kv1.2; Mk-2; Akr6a4	Kca1-2; Kv1.2; Mk-2; Akr6a4
Mus musculus	Riken	ILMN_205573	ILMN_205573	A330057G13RIK	ri|A330057G13|PX00132G23|AK039536|829					AK039536	A330057G13Rik		ILMN_1241044	000460446	S	546	GGTGATACTGTGACCTTCAGGACCCCTTAAGACTGTGGGAAAGAACTCTG										
Mus musculus	Riken	ILMN_206480	ILMN_206480	FANCA	ri|D430021P18|PX00194A13|AK084990|2996					AK084990	Fanca		ILMN_1238696	002370168	S	2742	CCTGAAGGTGTCTGGCTTCTGCGGCTTTCTTGTGTTTATCTCAGCACACG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IMP]			
Mus musculus	MEEBO	ILMN_221644	ILMN_221644	FABP7	scl38907.5.1_34	NM_021272.2			31982495	NM_021272.2	Fabp7		ILMN_2738330	007000753	S	578	TCTTCGGTGTGGAGGTAGAAAATTATAATTCTAAGATGTGTTACTCCAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; The creation of greater cell numbers in the forebrain due to cell division of progenitor cells [goid 21846] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_206872	ILMN_206872	ECHS1	ri|D930049N01|PX00203F08|AK086762|4090					AK086762	Echs1		ILMN_2583318	006280180	S	3900	GGTGCGGTGAAGGACGTTGGACAGTCATGAGCCTCTCTGTGGAGAGAACC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O [goid 4300] [evidence IEA]		
Mus musculus	Riken	ILMN_203278	ILMN_203278	9430028P18RIK	ri|9430028P18|PX00108M04|AK079126|1847					AK079126	9430028P18Rik		ILMN_2556078	003360593	S	1047	GCCCTCATGAGTGAAAGCTCTGCCTTTGTTGAGAACTGTTGCTCCTGGAG										
Mus musculus	RefSeq	ILMN_197824	ILMN_197824	LOC230602	XM_149473.1	XM_149473.1			20841152	XM_149473.1	LOC230602		ILMN_1244371	006940767	S	779	GAGGATTACCTTCCCAAGTCTCAGTCCCTTCCTCACCAGTCGGGACACTT										
Mus musculus	RefSeq	ILMN_209787	ILMN_209787	P42POP	NM_145579.2	NM_145579.2		232934	142381397	NM_145579.2	P42pop	NP_663554.1	ILMN_1242595	007050064	S	1615	CTGTTCATGACTTAAAGAGAAGCAACGTGTGGGGACCTCCCTACTCCCCC	7	+	19586851-19586900	7qA3	Mus musculus Myb protein P42POP (P42pop), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218866	ILMN_218866	PUF60	NM_133691.4	NM_133691.4		67959	146149295	NM_133691.4	Puf60	NP_598452.2	ILMN_1239698	006280632	S	1662	CAGCGACCTCTCCGCGTGACTTTGGCCTCATTTCCTGGACTTGCACTTGC				15qD3	Mus musculus poly-U binding splicing factor 60 (Puf60), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	SIAHBP1; 2810454F19Rik; 2410104I19Rik	SIAHBP1; 2810454F19Rik; 2410104I19Rik
Mus musculus	MEEBO	ILMN_222524	ILMN_222524	5031434C07RIK	scl28561.3.1_5	NM_177012.1			28892876	NM_177012.1	5031434C07Rik		ILMN_2750873	003190520	S	1711	GCAACACCCACCTTCCAAAAGGATCACAGTGATTGCAGATGTGCCTGGCT										
Mus musculus	RefSeq	ILMN_218157	ILMN_218157	OLAH	NM_145921.1	NM_145921.1		99035	22122330	NM_145921.1	Olah	NP_666033.1	ILMN_2859539	002650647	S	1266	GCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACCAATAGG	2	-	3259452-3259501	2qA1	Mus musculus oleoyl-ACP hydrolase (Olah), mRNA.		The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: oleoyl-[acyl-carrier protein] + H2O = [acyl-carrier protein] + oleate [goid 4320] [evidence IEA]	Thedc1; E230009B14Rik; AI607300	Thedc1; E230009B14Rik; AI607300
Mus musculus	MEEBO	ILMN_192017	ILMN_192017	TBX18	scl35522.9_4				31560049	NM_023814	Tbx18		ILMN_2484259	004730373	S	10	GCATTGTTGCATTGTTAATTATAATTATCTATCTGTATTTTATTAAGAAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218357	ILMN_241555	DEFB39	NM_183038.2	NM_183038.2		360214	112807196	NM_183038.2	Defb39	NP_898859.2	ILMN_2774388	002230521	S	122	GCCCATATTTTCAAGATGAGATCGGCACGTGTTATGACAGAAGAGGCAAG	8	-	19052906-19052955	8qA1.3	Mus musculus defensin beta 39 (Defb39), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	MEEBO	ILMN_191726	ILMN_191726	B230216G23RIK	scl29383.4.1_215						B230216G23Rik		ILMN_2481643	007150669	S	5	TCAAGTGACAAAGTAGCGATACTTATTGTCCCCAGCTTACAGTTATTACC										
Mus musculus	RefSeq	ILMN_209578	ILMN_209578	ICOS	NM_017480.1	NM_017480.1		54167	8567361	NM_017480.1	Icos	NP_059508.1	ILMN_2906430	002450239	S	1817	GCTGCTGCTTTGGTCTCTGGGATCTGGGAAGTACAGTAGGGCCAAGACAG	1	+	61055736-61055785	1qC2	Mus musculus inducible T-cell co-stimulator (Icos), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AILIM; Ly115; H4	AILIM; Ly115; H4
Mus musculus	RefSeq	ILMN_212239	ILMN_236956	RPRD1B	NM_027434.2	NM_027434.2		70470	133892156	NM_027434.2	Rprd1b	NP_081710.1	ILMN_1256682	002690358	S	3006	CCCTTGTTTAACTTAAGTGAAACTTTTGTCCCTGAGAGTTGATCTGGCGG	2	+	157902742-157902791	2qH1	Mus musculus regulation of nuclear pre-mRNA domain containing 1B (Rprd1b), mRNA.				Crept; 2810446G03Rik; RP23-396G1.1	Crept; 2810446G03Rik; RP23-396G1.1
Mus musculus	MEEBO	ILMN_217261	ILMN_217261	4930515B02RIK	scl24760.3.1_62				51709554	XM_489063	4930515B02Rik		ILMN_1237412	004490093	S	619	TAAAGCCGTAAAACTGGGTATGAATGAACAATGGTGGTATCAAGCTGTGC										
Mus musculus	RefSeq	ILMN_197437	ILMN_235174	KCNQ2	NM_001006680.1	NM_001006680.1		16536	54873659	NM_001006680.1	Kcnq2	NP_001006681.1	ILMN_1241017	001340608	S	1914	CATGGTACTGCTGCTGGATGGACCTATTCTCAGTGGTCACTTGGCTCAGG	2	-	180843476-180843525	2qH4	Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 12, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	HNSPC; KQT2	HNSPC; KQT2
Mus musculus	RefSeq	ILMN_219980	ILMN_219980	OLFR1047	NM_147012.1	NM_147012.1		259014	22128912	NM_147012.1	Olfr1047	NP_667223.1	ILMN_2716006	002940450	S	778	GTGCAGCCTAATTCCAGCCACTCCTTTGAAACTGATAAAGTGGCTTCCAT	2	-	86068299-86068348	2qD	Mus musculus olfactory receptor 1047 (Olfr1047), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR188-3	MOR188-3
Mus musculus	RefSeq	ILMN_198477	ILMN_198477	LOC231936	XM_149734.2	XM_149734.2			38085532	XM_149734.2	LOC231936		ILMN_1246913	002340189	S	580	GCATGGAGCTGGGAGGAAGTACAAGGCCCCACTTCTACATTGCTGGATTG										
Mus musculus	RefSeq	ILMN_218659	ILMN_218659	SMYD5	NM_144918.1	NM_144918.1		232187	21450314	NM_144918.1	Smyd5	NP_659167.1	ILMN_2787738	000380224	S	1652	TCAGGGTGGCAACATAATGGCCAATCAGAGAGCAGACCGGCTTTCTTGAG	6	+	85391597-85391616:85391732-85391761	6qC3	Mus musculus SET and MYND domain containing 5 (Smyd5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rai15; MGC29044; Rrg1; AW536703; NN8-4AG	Rai15; MGC29044; Rrg1; AW536703; NN8-4AG
Mus musculus	RefSeq	ILMN_220120	ILMN_220120	INPP5A	NM_183144.1	NM_183144.1		212111	34147160	NM_183144.1	Inpp5a	NP_898967.1	ILMN_2717861	005690687	S	2538	CTACAGTTCCTGGATGGGGCGGAGGCGCGAGTTAATGTCGGTTTCCCTAG	7	+	139430736-139430785	7qF4	Mus musculus inositol polyphosphate-5-phosphatase A (Inpp5a), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	The process of removing a phosphate group from any mono- or polyphosphorylated inositol [goid 46855] [evidence ISO]	Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [evidence ISO]		
Mus musculus	RefSeq	ILMN_220120	ILMN_220120	INPP5A	NM_183144.1	NM_183144.1		212111	34147160	NM_183144.1	Inpp5a	NP_898967.1	ILMN_2965275	006560730	S	2360	CGTCCACTTCCCACAGATTGCTTCTAGCATGGGCTGTGTGTAAACCTGGC	7	+	139430558-139430607	7qF4	Mus musculus inositol polyphosphate-5-phosphatase A (Inpp5a), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	The process of removing a phosphate group from any mono- or polyphosphorylated inositol [goid 46855] [evidence ISO]	Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [evidence ISO]		
Mus musculus	RefSeq	ILMN_188225	ILMN_323527	LOC100048372	XR_034455.1	XR_034455.1		100048372	149258115	XR_034455.1	LOC100048372		ILMN_1227024	006660750	S	2758	ATGGCAGCTATTGCAAGGAGTAGGGGCCGCGGGTCTACCTGCTGTTAAGC					PREDICTED: Mus musculus similar to F-box and leucine-rich repeat protein 19 (LOC100048372), misc RNA.					
Mus musculus	RefSeq	ILMN_188225	ILMN_323527	LOC100048372	XR_034455.1	XR_034455.1		100048372	149258115	XR_034455.1	LOC100048372		ILMN_1229640	007400632	S	3202	CCGGAAATCAGTGCTAAGACTGGAAACGGTCCCTCTTAGTTGCTGTGGGA					PREDICTED: Mus musculus similar to F-box and leucine-rich repeat protein 19 (LOC100048372), misc RNA.					
Mus musculus	Riken	ILMN_201827	ILMN_201827	2610304G08RIK	ri|2610304G08|ZX00062K19|AK011979|1205					AK011979	2610304G08Rik		ILMN_1250282	001660131	S	100	ACCAAGGATACTGCCGCCTCCTAAGGATCGTTTTCCTCCGGCTCCGAAGC										
Mus musculus	RefSeq	ILMN_232052	ILMN_232052	MGC118210	NM_001025607.1	NM_001025607.1		382275	71037365	NM_001025607.1	MGC118210	NP_001020778.1	ILMN_2782556	001940576	S	150	CAGATGAAGAAGAGCAGGCTCATTCTGAAGTAAAGAGGCCAGCATTTGGC	X	-	24980576-24980596:24986201-24986229	XqA2	Mus musculus similar to XMR (MGC118210), mRNA.					
Mus musculus	RefSeq	ILMN_217074	ILMN_217074	EIF5A	NM_181582.3	NM_181582.3		276770	142380083	NM_181582.3	Eif5a	NP_853613.1	ILMN_2686044	006040086	S	1004	TGGTAAATGGTCTTGTGCCCTTTATCCTACTCATCCCCGATCTGGTCCCC	11	-	69731117-69731166	11qB3	Mus musculus eukaryotic translation initiation factor 5A (Eif5a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	uORF3; MGC6725; uORF2; uORF; D19Wsu54e; AA410058; uORF1; Eif4d	uORF3; MGC6725; uORF2; uORF; D19Wsu54e; AA410058; uORF1; Eif4d
Mus musculus	RefSeq	ILMN_217074	ILMN_217074	EIF5A	NM_181582.3	NM_181582.3		276770	142380083	NM_181582.3	Eif5a	NP_853613.1	ILMN_2678828	004230563	S	122	AGGCAGCAGTTGGGCTCGCGGCGAGCGGACCAGGTCAAGTCAGTGCGTTC	11	-	69734672-69734721	11qB3	Mus musculus eukaryotic translation initiation factor 5A (Eif5a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	uORF3; MGC6725; uORF2; uORF; D19Wsu54e; AA410058; uORF1; Eif4d	uORF3; MGC6725; uORF2; uORF; D19Wsu54e; AA410058; uORF1; Eif4d
Mus musculus	RefSeq	ILMN_198147	ILMN_198147	LOC381088	XM_355007.1	XM_355007.1			38082158	XM_355007.1	LOC381088		ILMN_2530650	000430138	S	117	GGAGAAGAGATACACAGAACCAGGATGGGAGGAAGGAGAGCTTGGATTGG										
Mus musculus	RefSeq	ILMN_189627	ILMN_232975	LOC674087	XM_974283.1	XM_974283.1		674087	94393659	XM_974283.1	LOC674087	XP_979377.1	ILMN_1227317	001050142	S	247	GGTGGTAGCACCTACTATCCAGACACTGTAAAGGGCCGATTCACCATCTC					PREDICTED: Mus musculus similar to Ig heavy chain V region 5-84 precursor (LOC674087), mRNA.					
Mus musculus	RefSeq	ILMN_219324	ILMN_227162	PCDH11X	NM_001081385.1	NM_001081385.1		245578	124487050	NM_001081385.1	Pcdh11x	NP_001074854.1	ILMN_2707253	002450746	S	3815	GCTGGATGCCAGCTACTTTGACCAATCCTAGCCCTTCACAGATAAAGACC	X	+	118019394-118019443	XqE2	Mus musculus protocadherin 11 X-linked (Pcdh11x), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	A230092L07Rik; MGC141524; PCDHX	A230092L07Rik; MGC141524; PCDHX
Mus musculus	RefSeq	ILMN_223629	ILMN_223629	GJB5	NM_010291.3	NM_010291.3		14622	142353936	NM_010291.3	Gjb5	NP_034421.1	ILMN_2766772	006060097	S	1353	CCTGAAGTCAAGGGGTTTCCCTCTCCTCTAGAAAAGGAGTATCTAACTTT	4	-	127032354-127032403	4qD2.2	Mus musculus gap junction protein, beta 5 (Gjb5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]		Cx31.1; Gjb-5; Cnx31.1	Cx31.1; Gjb-5; Cnx31.1
Mus musculus	MEEBO	ILMN_223073	ILMN_223073	PLXNB3	scl54845.33_3	NM_019587.1			9625024	NM_019587.1	Plxnb3		ILMN_2759012	004060333	S	5526	CCCCACTGCCTGGAGGCTCTTCGAGAACTTTACAACCACATCCACAGGTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_253041	ILMN_253041	C78339	NM_001033192.2	NM_001033192.2		97863	142380819	NM_001033192.2	C78339	NP_001028364.1	ILMN_3162465	001030753	S	1253	GGGGTCAGATGATGTCCAGAACCCTGAATCCCACTCTAAGGAATAACGAC	13	+	46771014-46771025:46771026-46771063	13qA5	Mus musculus expressed sequence C78339 (C78339), mRNA.					
Mus musculus	MEEBO	ILMN_184582	ILMN_184582	SILG111	scl0020461.1_17						Silg111		ILMN_2419841	004900598	S	11	CCCATGACAGTTCCAGAAGTGATCCAGACTCTCAGAGTCTTGAGCTTTGG										
Mus musculus	MEEBO	ILMN_189572	ILMN_189572	A230057D06RIK	scl00319893.1_297				51749579	XM_489183	A230057D06Rik		ILMN_2462461	007330386	S	18	CCAATTCTATCTAAACTCAGATTCATGGGCACTTGGATGTATAAGGTATG										
Mus musculus	RefSeq	ILMN_199818	ILMN_199818	LOC383055	XM_356827.1	XM_356827.1			38077623	XM_356827.1	LOC383055		ILMN_2536593	002680609	S	1818	CCACACCAGTAGTAAGAACCCCAGGAACCCCAGAGACCACATCAGTTACC										
Mus musculus	RefSeq	ILMN_222894	ILMN_257747	TBC1D9B	NM_029745.2	NM_029745.2		76795	124358939	NM_029745.2	Tbc1d9b	NP_084021.2	ILMN_1251220	005340435	S	4740	CCCTGGCTGTTTAGCAGGACAGAGGCATCCATGTGCCCAAGAGCTGCTTT	11	+	49985829-49985878	11qB1.3	Mus musculus TBC1 domain family, member 9B (Tbc1d9b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AU019384; RP23-319B15.5; 2700008N14Rik	AU019384; RP23-319B15.5; 2700008N14Rik
Mus musculus	RefSeq	ILMN_203676	ILMN_257747	TBC1D9B	NM_029745.2	NM_029745.2		76795	124358939	NM_029745.2	Tbc1d9b	NP_084021.2	ILMN_1231802	006420484	S	2920	CTTCACAGAGGATAGCTCCTCGGAAGCACTGCTACAGGAGCAGCAGGAAG	11	+	49977373-49977398:49981671-49981694	11qB1.3	Mus musculus TBC1 domain family, member 9B (Tbc1d9b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AU019384; RP23-319B15.5; 2700008N14Rik	AU019384; RP23-319B15.5; 2700008N14Rik
Mus musculus	RefSeq	ILMN_203541	ILMN_257747	TBC1D9B	NM_029745.2	NM_029745.2		76795	124358939	NM_029745.2	Tbc1d9b	NP_084021.2	ILMN_1213866	003520450	S	2464	CCAGTCCTTGGAAGACACGGCTAAGAGAAGCGTGGTCCGAGCCATACCAG	11	+	49972229-49972262:49973145-49973160	11qB1.3	Mus musculus TBC1 domain family, member 9B (Tbc1d9b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AU019384; RP23-319B15.5; 2700008N14Rik	AU019384; RP23-319B15.5; 2700008N14Rik
Mus musculus	MEEBO	ILMN_191904	ILMN_191904	4930438A20RIK	scl14271.1.1_127						4930438A20Rik		ILMN_2483235	005900110	S	2	CCAGCTGTGAAGGACTTTTAGCCCTCGGGAAACTTAAGCTCAGTAAACTC										
Mus musculus	MEEBO	ILMN_209627	ILMN_209627	PMAIP1	scl058801.3_94	NM_021451.1			10946831	NM_021451.1	Pmaip1		ILMN_2724526	007610324	S	2608	GCAACTATTAAATAAAAGTTGATACTAAAGTAACTATTGAAAAATGCAAA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IMP]; The process by which a protein is incorporated into a mitochondrial membrane as an early step in apoptosis [goid 1844] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205195	ILMN_205195	TKT	ri|D030020D18|PX00179H03|AK050793|3160					AK050793	Tkt		ILMN_2570712	003840390	S	2715	TAGAGAGAAGGGCTTTAGTTCCCAGAGGCTGTGTTGGCGTAGAGCCAGGC							The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [evidence IDA]		
Mus musculus	RefSeq	ILMN_245739	ILMN_245739	STFA1	NM_001082543.1	NM_001082543.1		20861	127139201	NM_001082543.1	Stfa1	NP_001076012.1	ILMN_2988931	003360056	S	36	GCAACGCATCAAGATGAGTCTTGGAGGTGTTTCAGAGGCAAGCCGTGCCA	16	+	36277269-36277281:36277282-36277318	16qB3	Mus musculus stefin A1 (Stfa1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	Stf1	Stf1
Mus musculus	RefSeq	ILMN_191504	ILMN_245739	STFA1	NM_001082543.1	NM_001082543.1		20861	127139201	NM_001082543.1	Stfa1	NP_001076012.1	ILMN_2774410	000940717	S	58	GGAGGTGTTTCAGAGGCAAGCCGTGCCACACCAGAAATCCAGATGATTGC	16	+	36277291-36277340	16qB3	Mus musculus stefin A1 (Stfa1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	Stf1	Stf1
Mus musculus	MEEBO	ILMN_215218	ILMN_215218	GMEB2	scl18205.11_294	NM_198169.1			37718988	NM_198169.1	Gmeb2		ILMN_1235072	005490431	S	3582	CAGCTTCAGAATTAGTTCATAGCACTCCTTCCCAGTATCCTCAGAGGCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_222188	ILMN_222188	C230029M16	scl37452.4.1_330				51765910	XM_488580	C230029M16		ILMN_2745953	000110315	S	2301	TGTTGTCAGATCTTTTACTAAAAGTTCATTTATCACTATAAAGGATAAGA										
Mus musculus	RefSeq	ILMN_203977	ILMN_230063	GLT8D2	NM_029102.2	NM_029102.2		74782	141802292	NM_029102.2	Glt8d2	NP_083378.1	ILMN_1235410	001070167	S	1018	TCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCG	10	-	82114263-82114263:82115613-82115661	10qC1	Mus musculus glycosyltransferase 8 domain containing 2 (Glt8d2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	1110021D20Rik; MGC100315	1110021D20Rik; MGC100315
Mus musculus	RefSeq	ILMN_209675	ILMN_230063	GLT8D2	NM_029102.2	NM_029102.2		74782	141802292	NM_029102.2	Glt8d2	NP_083378.1	ILMN_1222429	005570370	S	1403	CTTCTTGAAGTTCAAACGATTGCCATGAGCAGCCCCTACTCATTCTTTTC	10	-	82113878-82113927	10qC1	Mus musculus glycosyltransferase 8 domain containing 2 (Glt8d2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	1110021D20Rik; MGC100315	1110021D20Rik; MGC100315
Mus musculus	RefSeq	ILMN_221792	ILMN_315165	EG639644	XR_034546.1	XR_034546.1		639644	149267942	XR_034546.1	EG639644		ILMN_1229831	003170307	S	1563	CCTCAGGTAGGATGAGTTGAAGAGATATAAAACAGGTACTGAGCTGTCTC				16qB5	PREDICTED: Mus musculus predicted gene, EG639644 (EG639644), misc RNA.					
Mus musculus	RefSeq	ILMN_196218	ILMN_234552	NIN	NM_008697.2	NM_008697.2		18080	125346155	NM_008697.2	Nin	NP_032723.2	ILMN_2778195	004640397	S	6303	CATGCACACACGTACATGCACACCGCACACAGACATGAGCTGGGACATGT	12	-	71120082-71120131	12qC2	Mus musculus ninein (Nin), transcript variant 2, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI385615; 3110068G20Rik; AU024711; mKIAA1565	AI385615; 3110068G20Rik; AU024711; mKIAA1565
Mus musculus	RefSeq	ILMN_196218	ILMN_234552	NIN	NM_008697.2	NM_008697.2		18080	125346155	NM_008697.2	Nin	NP_032723.2	ILMN_2647146	005220215	S	6463	ACTTCTGCTTGCTACAAATCAGCTTATTTATATGGTTTAAAGAGTGGATT	12	-	71119922-71119971	12qC2	Mus musculus ninein (Nin), transcript variant 2, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI385615; 3110068G20Rik; AU024711; mKIAA1565	AI385615; 3110068G20Rik; AU024711; mKIAA1565
Mus musculus	Riken	ILMN_204512	ILMN_204512	SERPINE2	ri|B230326M24|PX00160G23|AK045954|2047					AK045954	Serpine2		ILMN_1246808	000870309	S	1621	GTGGAATGCTGGATGCCTGGGATGCTGTAGTGAAGGATGAGCAGGCCGGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222267	ILMN_259689	GPER	NM_029771.2	NM_029771.2		76854	142378497	NM_029771.2	Gper	NP_084047.1	ILMN_2747135	002000280	S	2276	CTGACTGAGAAAGGCCCTTTAACAAAACGCCTTCCTGCTCTGGGATGCTC	5	+	139903521-139903570	5qG2	Mus musculus G protein-coupled estrogen receptor 1 (Gper), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	GPCR-Br; Ceprl; Gpr30; 6330420K13Rik; CMKRL2; FEG-1	GPCR-Br; Ceprl; Gpr30; 6330420K13Rik; CMKRL2; FEG-1
Mus musculus	Riken	ILMN_207107	ILMN_207107	5830487H14RIK	ri|5830487H14|PX00645N06|AK077805|1050					AK077805	5830487H14Rik		ILMN_1260126	003800280	S	802	CCGACACACTGTATTTAGTTTCATGGGTAGCGCCTCTCTCTCAACTCCTC										
Mus musculus	MEEBO	ILMN_222259	ILMN_222259	DHCR24	scl25176.1.2_129	XM_131538.1			20840930	XM_131538.1	Dhcr24		ILMN_2747031	002100162	S	1167	CACTGTCTTTGGCTAGAAAGCTGAATTGGCTGTTGCTGAAAGGAAGGAGG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence ISO]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16125] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; The process whereby plasminogen is processed to plasmin. This process includes both the cleavage of plasminogen between Arg560-Val561 to form plasmin and cleavage at Arg310 by plasmin or trypsin to result in the final two-chain form of plasmin held together by disulfide bonds [goid 31639] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces NAD or NADP [goid 16628] [evidence ISO]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189275	ILMN_261390	UPF3A	NM_025924.2	NM_025924.2		67031	124249088	NM_025924.2	Upf3a	NP_080200.1	ILMN_2511401	007050605	S	497	CTGCTGTGGTGGAGTTTGCTCCATTCCAGAAGATTGCCAAAAAGAAGCTG	8	+	13791894-13791943	8qA1.1	Mus musculus UPF3 regulator of nonsense transcripts homolog A (yeast) (Upf3a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence ISO]	Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence ISO]	MGC151365; UPF3; RENT3A; 4930546M19Rik; 2600001C03Rik	MGC151365; UPF3; RENT3A; 4930546M19Rik; 2600001C03Rik
Mus musculus	RefSeq	ILMN_189275	ILMN_261390	UPF3A	NM_025924.2	NM_025924.2		67031	124249088	NM_025924.2	Upf3a	NP_080200.1	ILMN_2459858	004120609	S	1245	CCCCATGGACGTGGCAGAGAGAAGCGGCAAGGAGCACAAGGAGTATGACA	8	+	13798381-13798430	8qA1.1	Mus musculus UPF3 regulator of nonsense transcripts homolog A (yeast) (Upf3a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence ISO]	Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence ISO]	MGC151365; UPF3; RENT3A; 4930546M19Rik; 2600001C03Rik	MGC151365; UPF3; RENT3A; 4930546M19Rik; 2600001C03Rik
Mus musculus	RefSeq	ILMN_201510	ILMN_320572	LOC100046578	XM_001476450.1	XM_001476450.1		100046578	149256792	XM_001476450.1	LOC100046578	XP_001476500.1	ILMN_1241461	006100437	S	696	TCCGTGGAGCTCCTGGTCTCAGGTGAGGAACCTCAGCCTTCCATAGAATG					PREDICTED: Mus musculus similar to PIRA2 (LOC100046578), mRNA.					
Mus musculus	RefSeq	ILMN_250995	ILMN_250995	CLIP1	NM_019765.2	NM_019765.2		56430	23821024	NM_019765.2	Clip1	NP_062739.2	ILMN_2920759	002140338	S	4292	TGGGCACTGGGCAACCAACTGCAATGACGACGAGACCTTCTGAGGAAGCC	5	-	123839883-123839894:123839895-123839932	5qF	Mus musculus CAP-GLY domain containing linker protein 1 (Clip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence ISO]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with the plus end of a microtubule [goid 51010] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	CYLN1; 1110007I12Rik; Rsn; mKIAA4046; 4631429H07Rik; KIAA4046; C81039; AV017631; CLIP-170; CLIP170; Clip50	CYLN1; 1110007I12Rik; Rsn; mKIAA4046; 4631429H07Rik; KIAA4046; C81039; AV017631; CLIP-170; CLIP170; Clip50
Mus musculus	RefSeq	ILMN_221755	ILMN_221755	LCN4	NM_010695.1	NM_010695.1		16821	6754515	NM_010695.1	Lcn4	NP_034825.1	ILMN_3005154	005870014	S	535	CCCATACATGACAGTGCCCACCAGGACCACAAATGCTGAGACAGACTTGC	2	-	26523383-26523394:26523395-26523417:26523857-26523871	2qA3	Mus musculus lipocalin 4 (Lcn4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	A630045M08Rik; Vnsp2; MGC141052	A630045M08Rik; Vnsp2; MGC141052
Mus musculus	RefSeq	ILMN_186584	ILMN_249313	NUSAP1	NM_001042652.1	NM_001042652.1		108907	111118995	NM_001042652.1	Nusap1	NP_001036117.1	ILMN_1231500	001340093	S	1381	CAAGTTGATGACTGAAGCAACACAGACTCCAAGTTCTAGTAAGAAGCCAG	2	+	119469533-119469582	2qE5	Mus musculus nucleolar and spindle associated protein 1 (Nusap1), transcript variant 2, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence ISA]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence ISA]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence ISA]; The cell cycle process whereby the directed movement of the mitotic spindle to a specific location in the cell occurs [goid 40001] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence ISA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	LNP; SAPL; 2610201A12Rik; NuSAP; BM037; Q0310; ANKT; AW547774; BB165529; AI481307	LNP; SAPL; 2610201A12Rik; NuSAP; BM037; Q0310; ANKT; AW547774; BB165529; AI481307
Mus musculus	RefSeq	ILMN_249313	ILMN_249313	NUSAP1	NM_001042652.1	NM_001042652.1		108907	111118995	NM_001042652.1	Nusap1	NP_001036117.1	ILMN_3156419	005220296	A	2565	CCACAACTGTTGAGACAGGGCCTCATGTAGGGCAAACTGGTCCCAAACTC	2	+	119475600-119475649	2qE5	Mus musculus nucleolar and spindle associated protein 1 (Nusap1), transcript variant 2, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence ISA]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence ISA]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence ISA]; The cell cycle process whereby the directed movement of the mitotic spindle to a specific location in the cell occurs [goid 40001] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence ISA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	LNP; SAPL; 2610201A12Rik; NuSAP; BM037; Q0310; ANKT; AW547774; BB165529; AI481307	LNP; SAPL; 2610201A12Rik; NuSAP; BM037; Q0310; ANKT; AW547774; BB165529; AI481307
Mus musculus	RefSeq	ILMN_186584	ILMN_249313	NUSAP1	NM_001042652.1	NM_001042652.1		108907	111118995	NM_001042652.1	Nusap1	NP_001036117.1	ILMN_2653765	001500491	S	2359	TACAAGTAGTAAAGAGAGGAAAGCTGCAAGGGGTGACCTTCTGATCTTTG	2	+	119475394-119475443	2qE5	Mus musculus nucleolar and spindle associated protein 1 (Nusap1), transcript variant 2, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence ISA]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence ISA]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence ISA]; The cell cycle process whereby the directed movement of the mitotic spindle to a specific location in the cell occurs [goid 40001] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence ISA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	LNP; SAPL; 2610201A12Rik; NuSAP; BM037; Q0310; ANKT; AW547774; BB165529; AI481307	LNP; SAPL; 2610201A12Rik; NuSAP; BM037; Q0310; ANKT; AW547774; BB165529; AI481307
Mus musculus	Riken	ILMN_205993	ILMN_205993	NFKB1	ri|D630036B16|PX00197N10|AK052726|1253					AK052726	Nfkb1		ILMN_2576736	005050541	S	1104	TGGAGCCAGCAAGATGGGTAAAAGCACTTGCTGTCAGGGCTGACCTGAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45083] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]		
Mus musculus	MEEBO	ILMN_220048	ILMN_220048	D6WSU176E	scl29247.11.6_29	NM_138587.3			42734495	NM_138587.3	D6Wsu176e		ILMN_2755492	000430551	S	2590	GCCTGGATTCTGTCTTGTACTGGTTACACCGGCTCAACTCGGGAAGCAAT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	Riken	ILMN_202617	ILMN_202617	AQR	ri|9430056J03|PX00109K21|AK020468|915					AK020468	Aqr		ILMN_1236398	004290670	S	844	ATGAGAGGAAGAAGGGAGAGCATGAATGTGAGGAGGAGCCAAGGGCCTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_210428	ILMN_210428	LAMB3	NM_008484.2	NM_008484.2		16780	113865980	NM_008484.2	Lamb3	NP_032510.2	ILMN_2605512	004850605	S	3776	CATAGACTGGTCACCCTGGACGTGCTTCAAGGTACTGTTCCCACTGAGCC	1	+	195169793-195169842	1qH6	Mus musculus laminin, beta 3 (Lamb3), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219199	ILMN_219199	6030422M01RIK	XM_128564.4	XM_128564.4		77875	94401875	XM_128564.4	6030422M01Rik	XP_128564.1	ILMN_1246965	000730196	S	708	GGTGTTAAATGACGTCGAGGGCTAGTGATGTCCAAGACGAGTAAAACGGC	17	-	33088246-33088295	17qB1	PREDICTED: Mus musculus RIKEN cDNA 6030422M01 gene (6030422M01Rik), mRNA.					
Mus musculus	Riken	ILMN_202754	ILMN_202754	4921505C17RIK	ri|4921505C17|PX00013N14|AK019537|3571					AK019537	4921505C17Rik		ILMN_2552030	005260341	S	3218	CCGTTTGCAGGATGACTTGTGGTGTGTTGGAGAAAGTACTCAGTAAGCTC						A protein complex that contains the TOR (target of rapamycin) serine/threonine kinase and mediates spatial control of cell growth via regulation of actin cytoskeleton polarization [goid 31932] [evidence IPI]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51896] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]			
Mus musculus	RefSeq	ILMN_245111	ILMN_245111	8430427H17RIK	NM_001001986.1	NM_001001986.1		329540	50233835	NM_001001986.1	8430427H17Rik	NP_001001986.1	ILMN_2910020	000290630	S	5332	GGCTCCAGACAGTAAGCATAAGGCACTTACCGCAAGCAGTGGATGGCACC	2	-	153233626-153233675	2qH1	Mus musculus RIKEN cDNA 8430427H17 gene (8430427H17Rik), transcript variant 1, mRNA.				AI429157; Gm1636; 4931410H15	AI429157; Gm1636; 4931410H15
Mus musculus	RefSeq	ILMN_201579	ILMN_201579	PLA2G4B	XM_358347.1	XM_358347.1			38075594	XM_358347.1	Pla2g4b		ILMN_1222402	005390019	S	1044	GCTGCTGCCCAGGTTCCCGCCTGTGTTGGGATCAGGCATTGCAGGAACTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a glycerophospholipid [goid 4620] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185857	ILMN_185857	TMC6	NM_181321.2	NM_181321.2		217353	31343393	NM_181321.2	Tmc6	NP_851838.1	ILMN_2430601	002760553	S	19	AGATATCTCTATGGGTAGCTTTCCCTTCTTCTGGAGGCCCAAGAATGGGC	11	-	117596643-117596692	11qE2	Mus musculus transmembrane channel-like gene family 6 (Tmc6), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			D11Ertd204e; EVER1	D11Ertd204e; EVER1
Mus musculus	Riken	ILMN_205475	ILMN_205475	4930550G17RIK	ri|D030014P16|PX00178F02|AK050748|983					AK050748	4930550G17Rik		ILMN_2572840	002970671	S	891	GACAGGTGAATCTCTGTGAGTTCCAAAGCCAGTCTAGTTCATGTAGAGAG										
Mus musculus	Riken	ILMN_204967	ILMN_204967	6720484J09RIK	ri|6720484J09|PX00060K23|AK032984|1856					AK032984	6720484J09Rik		ILMN_1216876	004070612	S	1513	GTCACTGAGAAGGTAAAAGGTTCAAGGGCAAGGCTGCAGGCATAGCTGCC										
Mus musculus	RefSeq	ILMN_212994	ILMN_212994	PSMD10	NM_016883.3	NM_016883.3		53380	40254368	NM_016883.3	Psmd10	NP_058579.2	ILMN_2694080	006510136	S	691	AGAGACTAGCAGAAAGTGAAGAGGCTTCTATGTAGTCTGTGTGCGGTCTG	X	-	137483649-137483679:137483680-137483698	XqF1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (Psmd10), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			AW554874	AW554874
Mus musculus	RefSeq	ILMN_212994	ILMN_212994	PSMD10	NM_016883.3	NM_016883.3		53380	40254368	NM_016883.3	Psmd10	NP_058579.2	ILMN_1239384	001580435	S	161	GCACTGGGCATGCTCAGCTGGCCATACAGAAATTGTTGAATTCTTGCTGC	X	-	137488355-137488404	XqF1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (Psmd10), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			AW554874	AW554874
Mus musculus	RefSeq	ILMN_212994	ILMN_212994	PSMD10	NM_016883.3	NM_016883.3		53380	40254368	NM_016883.3	Psmd10	NP_058579.2	ILMN_3003308	003450041	S	817	GCTCCTACTGAAGTACCGGGTCTATGCTTTCTACCCACTTTCCAGGGTTG	X	-	137483523-137483572	XqF1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (Psmd10), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			AW554874	AW554874
Mus musculus	RefSeq	ILMN_214257	ILMN_240834	LYRM7	NM_029327.2	NM_029327.2		75530	142385502	NM_029327.2	Lyrm7	NP_083603.1	ILMN_2646036	006860484	S	540	TTGCTCAGAACAGCTGTTATTCAAGGAATTCACACAGACCATGACACACT	11	-	54662082-54662131	11qB1.3	Mus musculus LYR motif containing 7 (Lyrm7), mRNA.				1700024C24Rik; 9330147L21Rik	1700024C24Rik; 9330147L21Rik
Mus musculus	RefSeq	ILMN_222133	ILMN_222133	OLFR1284	NM_146381.1	NM_146381.1		258379	22129538	NM_146381.1	Olfr1284	NP_666493.1	ILMN_3160263	001820528	S	188	TGGCCAATCTGTCCCTCATTGATGTTGGACTTTCCTCTACCACAGTGCCC	2	+	111219346-111219395	2qE3	Mus musculus olfactory receptor 1284 (Olfr1284), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR245-13	MOR245-13
Mus musculus	RefSeq	ILMN_220065	ILMN_220065	REG3A	NM_011259.1	NM_011259.1		19694	6755307	NM_011259.1	Reg3a	NP_035389.1	ILMN_1240824	002900543	S	747	CCCCTTACTTCAGGCTTTTCAATATAGTTCCTGCTTTGCAATCTTGCAGA	6	+	78333743-78333792	6qC3	Mus musculus regenerating islet-derived 3 alpha (Reg3a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AV063448	AV063448
Mus musculus	MEEBO	ILMN_223875	ILMN_223875	OLFR995	scl4359.1.1_40				33239123	NM_146434	Olfr995		ILMN_2770857	002760152	S	607	GATGGATTTAACCTGACGTTCACTGTGTTGGTCATTATCTTCTCCTACAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213554	ILMN_213554	MAP3K12	NM_009582.3	NM_009582.3		26404	141803505	NM_009582.3	Map3k12	NP_033608.2	ILMN_1236383	001440243	S	4947	CACTGGGTAGCAGCAAAATGCCTCATTCTGAACACAACTAGAGGTGTCTC	15	-	102328241-102328290	15qF3	Mus musculus mitogen-activated protein kinase kinase kinase 12 (Map3k12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A cell projection part that is part of an axon [goid 33267] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]; The modification of histones by addition of phosphate groups [goid 16572] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	DLK; Zpk; MUK	DLK; Zpk; MUK
Mus musculus	RefSeq	ILMN_213554	ILMN_213554	MAP3K12	NM_009582.3	NM_009582.3		26404	141803505	NM_009582.3	Map3k12	NP_033608.2	ILMN_2725370	000870468	S	3229	GCATGTGATGGCTCAGGCTGAAGAACTGGGGTGCTGTTAGTCCCCACTGT	15	-	102329959-102330008	15qF3	Mus musculus mitogen-activated protein kinase kinase kinase 12 (Map3k12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A cell projection part that is part of an axon [goid 33267] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]; The modification of histones by addition of phosphate groups [goid 16572] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	DLK; Zpk; MUK	DLK; Zpk; MUK
Mus musculus	MEEBO	ILMN_218330	ILMN_218330	A730089K16RIK	scl0320411.1_266	NM_177156.2			31342932	NM_177156.2	A730089K16Rik		ILMN_2694446	000110253	S	2230	GGGGGTGTGGCTGCAGACTAATGGAAGCTTTCAACGTGGCTCTATAGTAA										
Mus musculus	RefSeq	ILMN_223197	ILMN_223197	TINAGL1	NM_023476.2	NM_023476.2		94242	133892626	NM_023476.2	Tinagl1	NP_075965.1	ILMN_2760619	001660327	S	1777	TAGGAGACAAAGATGCACCAGGCTGGCGGAAGCCCCCAGATATCACAGCC	4	-	129843112-129843161	4qD2.2	Mus musculus tubulointerstitial nephritis antigen-like 1 (Tinagl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	1110021J17Rik; Lcn7; Arg1	1110021J17Rik; Lcn7; Arg1
Mus musculus	RefSeq	ILMN_218756	ILMN_218756	BC026439	NM_172378.2	NM_172378.2		210463	142385177	NM_172378.2	BC026439	NP_759010.1	ILMN_2699805	003360008	S	2157	GTCCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATT	15	-	57075487-57075536	15qD1	Mus musculus cDNA sequence BC026439 (BC026439), mRNA.				MGC31374	MGC31374
Mus musculus	RefSeq	ILMN_192562	ILMN_250161	UTP14B	NM_001001981.2	NM_001001981.2		195434	75992942	NM_001001981.2	Utp14b	NP_001001981.2	ILMN_2489266	007200435	S	3253	TATAGGCAGAATGACTTGGAGAAGACAGACAATGAAGATAGAGACGAGTA	1	+	78657458-78657507	1qC4	Mus musculus UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast) (Utp14b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins [goid 32040] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]		jsd; 4932411L21Rik	jsd; 4932411L21Rik
Mus musculus	RefSeq	ILMN_215790	ILMN_215790	FIGNL1	NM_021891.2	NM_021891.2		60530	31560299	NM_021891.2	Fignl1	NP_068691.2	ILMN_2663604	000670500	S	2566	AGCTAGAGTGAAAGCAACAGGGAGTAAACTACCGTAACCCGTGCTGGCTT	11	-	11700609-11700658	11qA1	Mus musculus fidgetin-like 1 (Fignl1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215391	ILMN_215391	AK122525	NM_199028.1	NM_199028.1		331623	39841054	NM_199028.1	AK122525	NP_950193.1	ILMN_2658914	001050278	S	4852	AGAGCTGGTCACTCTGGGAGCTGTTTCCTGCCCACTGGACCGTATGGTGT	10	+	43234172-43234221	10qB2	Mus musculus cDNA sequence AK122525 (AK122525), mRNA.				mKIAA1553	mKIAA1553
Mus musculus	RefSeq	ILMN_215391	ILMN_215391	AK122525	NM_199028.1	NM_199028.1		331623	39841054	NM_199028.1	AK122525	NP_950193.1	ILMN_1237245	007650379	S	23	ACGTCACGCGAGAGCGCAGCGCACGGACACACACAAAGAGAGGGGAAAAT	10	+	43198968-43199017	10qB2	Mus musculus cDNA sequence AK122525 (AK122525), mRNA.				mKIAA1553	mKIAA1553
Mus musculus	Riken	ILMN_205977	ILMN_205977	D130065A14RIK	ri|D130065A14|PX00185H12|AK051683|2142					AK051683	D130065A14Rik		ILMN_1229987	005670014	S	1485	CAGCTGTGCTGCAGCTGTCTGTGTTACTTCTGGCTCTGCAACAGATGTGG										
Mus musculus	RefSeq	ILMN_217506	ILMN_217506	PRAP1	NM_009475.1	NM_009475.1		22264	6678510	NM_009475.1	Prap1	NP_033501.1	ILMN_1259344	007560138	S	413	GATGAAGAAGTGCCCCAGTCACGGCCCATCCTGTATCGTCAGGTGCTGCA	7	+	147282895-147282944	7qF4	Mus musculus proline-rich acidic protein 1 (Prap1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Upa	Upa
Mus musculus	MEEBO	ILMN_188738	ILMN_188738	BTBD2	scl5738.1.1_5				51765751	XM_354550	Btbd2		ILMN_1220483	007050209	S	434	CGCCATGTTCAATGGTGGGATGGCTACCACGTCCACCGAGATTGAGCTGC										
Mus musculus	RefSeq	ILMN_208915	ILMN_208915	FGFR3	NM_008010.3	NM_008010.3		14184	91932800	NM_008010.3	Fgfr3	NP_032036.2	ILMN_2590766	001980184	S	1463	AGCTGTGATACTCTGCCGCCTGCGCAGTCCCCCAAAGAAGGGCTTGGGCT	5	+	34075468-34075517	5qB2	Mus musculus fibroblast growth factor receptor 3 (Fgfr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence ISO]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [evidence IDA]	Fgfr-3; HBGFR	Fgfr-3; HBGFR
Mus musculus	RefSeq	ILMN_208915	ILMN_208915	FGFR3	NM_008010.3	NM_008010.3		14184	91932800	NM_008010.3	Fgfr3	NP_032036.2	ILMN_1257208	007200035	S	2625	AGCTCCAGCTCGTCCGGAGATGACTCGGTGTTCACCCATGACCTGCTACC	5	+	34078123-34078172	5qB2	Mus musculus fibroblast growth factor receptor 3 (Fgfr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence ISO]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [evidence IDA]	Fgfr-3; HBGFR	Fgfr-3; HBGFR
Mus musculus	MEEBO	ILMN_185215	ILMN_185215	UCHL5	scl17388.13.1_60				9625046	NM_019562	Uchl5		ILMN_2425148	001340209	S	16	GACAACATCTTAATTGACTCAGTGCACGTTTGGCATAGTACCAGTCTGTC						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186127	ILMN_232506	LOC637155	XM_993527.1	XM_993527.1		637155	94378762	XM_993527.1	LOC637155	XP_998621.1	ILMN_2432838	005900010	S	34	CTGCTTTGGGTATCTGATACCTGTGGGGACATTGTGATGACCCAGTCTCC					PREDICTED: Mus musculus similar to Ig kappa chain V-IV region precursor (LOC637155), mRNA.					
Mus musculus	MEEBO	ILMN_193831	ILMN_193831	4930488P18RIK	scl25442.4.1_28						4930488P18Rik		ILMN_1238036	006450435	S	4	CAGATTCTGAAGGCGAAAAGGCTGGTGTGAAGAAGGGATCCAAGAAAGTT										
Mus musculus	Riken	ILMN_205530	ILMN_205530	D130060L11RIK	ri|D130060L11|PX00185D11|AK051623|1733					AK051623	D130060L11Rik		ILMN_2573260	004760152	S	1039	CCCATTGCACACTTCTGTGTTTGCCTGTCAGGATATCTGGAGCCATCCAG										
Mus musculus	RefSeq	ILMN_213690	ILMN_315919	LOC100045300	XM_001474658.1	XM_001474658.1		100045300	149270301	XM_001474658.1	LOC100045300	XP_001474708.1	ILMN_2639703	001230538	S	638	AGGATGAAGAGGATTATGACTCCTAGCGCCCTGTGCCCCTGTACCCCAGC					PREDICTED: Mus musculus similar to Dr1 associated protein 1 (negative cofactor 2 alpha) (LOC100045300), mRNA.					
Mus musculus	RefSeq	ILMN_184815	ILMN_184815	V1RC18	NM_134173.1	NM_134173.1		171191	21717674	NM_134173.1	V1rc18	NP_598934.1	ILMN_1247137	005360010	S	811	GCCTATCCCACAATAACTCCTTTGGTTCAAATCACTTCGGATGAAAGAAT	6	-	57905665-57905714	6qB3	Mus musculus vomeronasal 1 receptor, C18 (V1rc18), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_200440	ILMN_200440	LOC384291	XM_357547.1	XM_357547.1			38081948	XM_357547.1	LOC384291		ILMN_2538771	003130689	S	206	TGGATGTCATGAGCTGGAAGCTTCAAAGCGAGGACTTGGCCATGGCGCCC										
Mus musculus	RefSeq	ILMN_215504	ILMN_215504	LARGE	NM_010687.1	NM_010687.1		16795	6754505	NM_010687.1	Large	NP_034817.1	ILMN_1249514	004780113	S	3594	CCTGTACTGGGCTGTTTGTATTGAGTTGACATGTGACCAGCGAAAGCTGC	8	-	75339201-75339250	8qB3.3	Mus musculus like-glycosyltransferase (Large), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [evidence NAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence NAS]	froggy; Gyltl1a; BPFD#36; Mbp-1; mKIAA0609; Mbp1; enr; myd; fg	froggy; Gyltl1a; BPFD#36; Mbp-1; mKIAA0609; Mbp1; enr; myd; fg
Mus musculus	RefSeq	ILMN_220566	ILMN_220566	5730403M16RIK	NM_172738.2	NM_172738.2		232853	142349528	NM_172738.2	5730403M16Rik	NP_766326.1	ILMN_1253434	006250110	S	1620	AACAACACGCACACCCTGCATAGGTCTCTGGGTGCAGAGTTTGTAGAGAG	7	-	7067737-7067786	7qA1	Mus musculus RIKEN cDNA 5730403M16 gene (5730403M16Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AA123315; 8030437F07	AA123315; 8030437F07
Mus musculus	RefSeq	ILMN_249418	ILMN_249418	MEX3A	NM_001029890.1	NM_001029890.1		72640	71274133	NM_001029890.1	Mex3a	NP_001025061.1	ILMN_3072957	003990092	I	4963	CCCCCTGCCCTTTTTGCCCTAGGACCCTCAGTAGTTGGAGATGGTAGCAT	3	+	88344932-88344981	3qF1	Mus musculus mex3 homolog A (C. elegans) (Mex3a), mRNA.				Rkhd4; Gm411; AA387377; 2700083E18Rik	Rkhd4; Gm411; AA387377; 2700083E18Rik
Mus musculus	RefSeq	ILMN_191507	ILMN_249418	MEX3A	NM_001029890.1	NM_001029890.1		72640	71274133	NM_001029890.1	Mex3a	NP_001025061.1	ILMN_2479681	004540634	S	2933	CAAAGGCAAAAGACTGTTACACTAGGGGCTCCACAGATCCAATCCCACCC	3	+	88342902-88342951	3qF1	Mus musculus mex3 homolog A (C. elegans) (Mex3a), mRNA.				Rkhd4; Gm411; AA387377; 2700083E18Rik	Rkhd4; Gm411; AA387377; 2700083E18Rik
Mus musculus	RefSeq	ILMN_249418	ILMN_249418	MEX3A	NM_001029890.1	NM_001029890.1		72640	71274133	NM_001029890.1	Mex3a	NP_001025061.1	ILMN_3151736	006290367	A	1971	TGGGAGAGAAGTCTGGAGAGTGTTTTGATAGCCCCCACCTCCAGTTCCTC	3	+	88341940-88341989	3qF1	Mus musculus mex3 homolog A (C. elegans) (Mex3a), mRNA.				Rkhd4; Gm411; AA387377; 2700083E18Rik	Rkhd4; Gm411; AA387377; 2700083E18Rik
Mus musculus	RefSeq	ILMN_195584	ILMN_243008	SLK	NM_009289.2	NM_009289.2		20874	142360252	NM_009289.2	Slk	NP_033315.1	ILMN_2616980	003310377	S	2960	AATGAAGTGGAGAAAGCCCCCAGAGAGCTGAGGAGGGAGCTCACGAAGCG	19	+	47702144-47702193	19qD1	Mus musculus STE20-like kinase (yeast) (Slk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	SMAK; 9A2; AV021402; mSLK; Stk2; mKIAA0204; Etk4; AW411554	SMAK; 9A2; AV021402; mSLK; Stk2; mKIAA0204; Etk4; AW411554
Mus musculus	RefSeq	ILMN_195584	ILMN_243008	SLK	NM_009289.2	NM_009289.2		20874	142360252	NM_009289.2	Slk	NP_033315.1	ILMN_2759289	006560477	S	4035	AGGGCAGACGAACTAAGACAGATGCTCGGCCATGTTGGTGACGTAGCATC	19	+	47716741-47716790	19qD1	Mus musculus STE20-like kinase (yeast) (Slk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	SMAK; 9A2; AV021402; mSLK; Stk2; mKIAA0204; Etk4; AW411554	SMAK; 9A2; AV021402; mSLK; Stk2; mKIAA0204; Etk4; AW411554
Mus musculus	RefSeq	ILMN_200917	ILMN_247636	KCTD21	NM_001039039.3	NM_001039039.3		622320	148352322	NM_001039039.3	Kctd21	NP_001034128.2	ILMN_1250991	004200164	S	1155	AAGAGCAGCAGTTTTCTTACGGTGGAATCACCTGCCCCTAGTCAGTGCCC				7qE1	Mus musculus potassium channel tetramerisation domain containing 21 (Kctd21), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	EG622320	EG622320
Mus musculus	RefSeq	ILMN_208723	ILMN_208723	MAP3K4	NM_011948.2	NM_011948.2		26407	93102420	NM_011948.2	Map3k4	NP_036078.2	ILMN_2588911	003450671	S	5222	CTGCAGGTTTGTTATGCAAAGGCTCGTAAGTGAAGCTGAAGAAAAGGTTC	17	-	12420520-12420569	17qA1	Mus musculus mitogen-activated protein kinase kinase kinase 4 (Map3k4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]	mKIAA0213; D17Rp17; Mek4b; MAPKKK4; Mekk4; RP17; Rp17a; MTK1; D17Rp17e	mKIAA0213; D17Rp17; Mek4b; MAPKKK4; Mekk4; RP17; Rp17a; MTK1; D17Rp17e
Mus musculus	RefSeq	ILMN_245587	ILMN_245587	SMOK3B	NM_001039889.1	NM_001039889.1		622474	89941467	NM_001039889.1	Smok3b	NP_001034978.1	ILMN_2897198	005910706	S	2285	TCATAATCAGACTCCTCCTCTGAGAATAAAATAGATGTTTGTGAAAGACG				5qG2	Mus musculus sperm motility kinase 3B (Smok3b), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Smok2b2; 4931427P12Rik	Smok2b2; 4931427P12Rik
Mus musculus	RefSeq	ILMN_198924	ILMN_309964	D630033O11RIK	XM_001479244.1	XM_001479244.1		235302	149259945	XM_001479244.1	D630033O11Rik	XP_001479294.1	ILMN_1240549	002360681	S	272	TCAAAGGCAGTGGGCAAGGAGGAGGCCGCATGGAGCAGTCAGAAAGAACC	9	+	43073489-43073517:43073518-43073538	9qA5.1	PREDICTED: Mus musculus RIKEN cDNA D630033O11 gene (D630033O11Rik), mRNA.					
Mus musculus	Riken	ILMN_206269	ILMN_206269	D030044A08RIK	ri|D030044A08|PX00180P08|AK083553|3438					AK083553	D030044A08Rik		ILMN_2578850	003130368	S	2755	GATCCGAGGCTCTCTTCTGGCCTCCAAGGGCACCAGGCATATAGGGAAAA										
Mus musculus	RefSeq	ILMN_200097	ILMN_200097	LOC381663	XM_355630.1	XM_355630.1			38080351	XM_355630.1	LOC381663		ILMN_2537579	003420369	S	999	GAGGAGACCGCTGACTCTCTCACCAGTGATTGAGAGGATGTGCTTTGCCC										
Mus musculus	RefSeq	ILMN_248387	ILMN_248387	2810410C14RIK	NM_175471.2	NM_175471.2		230582	31341983	NM_175471.2	2810410C14Rik	NP_780680.1	ILMN_2964728	007040307	S	1470	GGACCTTAACTTCTGTGCCTCCTGTGGGGTGGACCTGACTTGCTGAAGGC	4	+	106757275-106757324	4qC7	Mus musculus RIKEN cDNA 2810410C14 gene (2810410C14Rik), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence IEA]	mFLJ00377; FLJ00377	mFLJ00377; FLJ00377
Mus musculus	RefSeq	ILMN_217584	ILMN_217584	RABGAP1	NM_146121.2	NM_146121.2		227800	76880488	NM_146121.2	Rabgap1	NP_666233.2	ILMN_2685079	006770446	S	4835	GGTGTGTGGACATTGTGTGCTAGGGTAGTTTGTGTGTCAACTCCATGAAC	2	+	37421825-37421874	2qB	Mus musculus RAB GTPase activating protein 1 (Rabgap1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	Gapcena; KIAA4104; mKIAA4104; MGC30493	Gapcena; KIAA4104; mKIAA4104; MGC30493
Mus musculus	RefSeq	ILMN_197261	ILMN_321987	LOC623453	XR_032986.1	XR_032986.1		623453	149249453	XR_032986.1	LOC623453		ILMN_1214521	002370189	S	519	AAGCAGCAAAGACATACAGCAGCCCCCACTGACCCCACTGATGGCCCATG				2qC3	PREDICTED: Mus musculus similar to proteolipid protein 2 (LOC623453), misc RNA.					
Mus musculus	RefSeq	ILMN_219546	ILMN_219546	OLFR103	NM_146833.1	NM_146833.1		258830	22129192	NM_146833.1	Olfr103	NP_667044.1	ILMN_2992058	002570703	S	882	GGAAGTGAGGAGTGCATTGAATAGGAAGGTGAGAAGATGTCTCTTACTTG	17	-	37473244-37473293	17qB1	Mus musculus olfactory receptor 103 (Olfr103), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR250-8_p; MOR250-3	MOR250-8_p; MOR250-3
Mus musculus	RefSeq	ILMN_219546	ILMN_219546	OLFR103	NM_146833.1	NM_146833.1		258830	22129192	NM_146833.1	Olfr103	NP_667044.1	ILMN_1244967	000240273	S	420	CCTTATGGCTGTGACCATCTGGACCATTGCTTTTCTCCATGCCTTGCTTC	17	-	37473706-37473755	17qB1	Mus musculus olfactory receptor 103 (Olfr103), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR250-8_p; MOR250-3	MOR250-8_p; MOR250-3
Mus musculus	MEEBO	ILMN_184461	ILMN_184461	2200002D01RIK	scl072275.3_24						2200002D01Rik		ILMN_2418811	004900082	S	15	CATGTGGGAGACCCCAAACACTGTCCTCTTAAAGCGCCGGGCGGGCCAGA						A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]				
Mus musculus	RefSeq	ILMN_188527	ILMN_238303	C030019I05RIK	NM_177075.3	NM_177075.3		320116	141802268	NM_177075.3	C030019I05Rik	NP_796049.1	ILMN_2710648	003830681	S	1876	GGACCGAGGAATTAGAATGGACCCAGTGGCGACAATCACTTGGAATGAAG	11	+	46052986-46053035	11qB1.1	Mus musculus RIKEN cDNA C030019I05 gene (C030019I05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-370F7.2; MGC129499; MGC27121; MGC129498	RP23-370F7.2; MGC129499; MGC27121; MGC129498
Mus musculus	RefSeq	ILMN_190583	ILMN_190583	TMEM14A	NM_029398.2	NM_029398.2		75712	109948262	NM_029398.2	Tmem14a	NP_083674.2	ILMN_2471444	006480440	S	480	GTGAGATTTAAGAGGTCCAAGAAAGTAATGCCTGCTGGTCTAGTTGCAGG	1	+	21216705-21216754	1qA4	Mus musculus transmembrane protein 14A (Tmem14a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5730496E24Rik; PTD011; C85783	5730496E24Rik; PTD011; C85783
Mus musculus	RefSeq	ILMN_213361	ILMN_213361	COL15A1	NM_009928.3	NM_009928.3		12819	134288881	NM_009928.3	Col15a1	NP_034058.2	ILMN_1222111	003850438	S	4938	GATCCGCTCAGACGATCCCGCTCATGTTTCCTCCGGCTTTGGTGTGGTCC	4	+	47325656-47325705	4qB1	Mus musculus collagen, type XV, alpha 1 (Col15a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_231465	ILMN_231465	NPPA	NM_008725.2	NM_008725.2		230899	142378163	NM_008725.2	Nppa	NP_032751.1	ILMN_3161547	006510619	S	582	GAGCAGATCGCAAAAGATCCTAAGCCCTTGTGGTGTGTCACGCAGCTTGG	4	+	147375929-147375978	4qE2	Mus musculus natriuretic peptide precursor type A (Nppa), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	ANP; Pnd; Anf	ANP; Pnd; Anf
Mus musculus	RefSeq	ILMN_186857	ILMN_186857	USP11	NM_145628.3	NM_145628.3		236733	141802478	NM_145628.3	Usp11	NP_663603.2	ILMN_2439089	004730259	S	2072	CAGACGGTGAACTCCAATGGAACCAGTGACCGGACCACTTCCCCTGAAGA	X	+	20295342-20295391	XqA1.3	Mus musculus ubiquitin specific peptidase 11 (Usp11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	6230415D12Rik; MGC6649; mKIAA4085; KIAA4085	6230415D12Rik; MGC6649; mKIAA4085; KIAA4085
Mus musculus	Riken	ILMN_202741	ILMN_202741	PDE1A	ri|C630048H13|PX00085H16|AK021279|1047					AK021279	Pde1a		ILMN_1224165	005910731	S	694	CCATAAGGCATGGGGCATCCACTTCCCCTTGGGTGAAAATACAAAGACGC							The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]		
Mus musculus	RefSeq	ILMN_196469	ILMN_223742	C130038G02RIK	NM_029920.5	NM_029920.5		77521	142362771	NM_029920.5	C130038G02Rik	NP_084196.4	ILMN_1235983	004390411	S	3371	GGCCAGTCTACCAAAATCTGGGCTTCGTCCTCCTGGCTATTCACGACTCC	5	+	148918615-148918664	5qG3	Mus musculus RIKEN cDNA C130038G02 gene (C130038G02Rik), transcript variant 2, mRNA.				mKIAA0774; AU067634; 5730592G18Rik; Gm763; A730013O20Rik	mKIAA0774; AU067634; 5730592G18Rik; Gm763; A730013O20Rik
Mus musculus	RefSeq	ILMN_200395	ILMN_223742	C130038G02RIK	NM_029920.5	NM_029920.5		77521	142362771	NM_029920.5	C130038G02Rik	NP_084196.4	ILMN_1246532	006480671	S	839	GACATCGTCAGAGGAGGACAGAGAAGGTGACAGTGGCCTGTTGCCCTGAG	5	+	148887878-148887927	5qG3	Mus musculus RIKEN cDNA C130038G02 gene (C130038G02Rik), transcript variant 2, mRNA.				mKIAA0774; AU067634; 5730592G18Rik; Gm763; A730013O20Rik	mKIAA0774; AU067634; 5730592G18Rik; Gm763; A730013O20Rik
Mus musculus	RefSeq	ILMN_223742	ILMN_223742	C130038G02RIK	NM_029920.5	NM_029920.5		77521	142362771	NM_029920.5	C130038G02Rik	NP_084196.4	ILMN_2768482	001780603	S	4710	GAAAGGATCCAGGTGCTGCAGCAGCAGAATGAAGACCTCAAAGCGAGGAT	5	+	149118230-149118279	5qG3	Mus musculus RIKEN cDNA C130038G02 gene (C130038G02Rik), transcript variant 2, mRNA.				mKIAA0774; AU067634; 5730592G18Rik; Gm763; A730013O20Rik	mKIAA0774; AU067634; 5730592G18Rik; Gm763; A730013O20Rik
Mus musculus	MEEBO	ILMN_224255	ILMN_224255	LOC329416	scl20834.16.1_186				40556611	NM_181547	LOC329416		ILMN_2777427	003850452	S	1631	GGAAGTTATCCTCTTTGCAGATTTTTCTTATGCAGTGGGTGGTAGAGGCC										
Mus musculus	RefSeq	ILMN_232521	ILMN_232521	GM1157	NM_001033473.1	NM_001033473.1		382384	85701994	NM_001033473.1	Gm1157	NP_001028645.1	ILMN_2783833	003390575	S	1078	GTGTCCCTTTCCCTGGCTGGACATGGAGCCGTGTGTCCTAGAATTCAGTG	10	-	79042775-79042824	10qC1	Mus musculus gene model 1157, (NCBI) (Gm1157), mRNA.					
Mus musculus	RefSeq	ILMN_211973	ILMN_211973	RAI14	NM_030690.2	NM_030690.2		75646	31981406	NM_030690.2	Rai14	NP_109615.1	ILMN_2682928	002450735	S	4454	GTGGCTGAGTTGGGTCTGTTCATCTGTCTTAGGTAACGATCAATACCAGC	15	-	10499129-10499178	15qA1	Mus musculus retinoic acid induced 14 (Rai14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			mKIAA1334; Ankycorbin; 1700020L11Rik; 1700008J19Rik; Norpeg	mKIAA1334; Ankycorbin; 1700020L11Rik; 1700008J19Rik; Norpeg
Mus musculus	RefSeq	ILMN_211973	ILMN_211973	RAI14	NM_030690.2	NM_030690.2		75646	31981406	NM_030690.2	Rai14	NP_109615.1	ILMN_2621328	000940220	S	1026	TAAGCTCAGAACGAAGTGGAACTCCAAAAAAGCGCAAAGCTCCACCACCT	15	-	10519031-10519080	15qA1	Mus musculus retinoic acid induced 14 (Rai14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			mKIAA1334; Ankycorbin; 1700020L11Rik; 1700008J19Rik; Norpeg	mKIAA1334; Ankycorbin; 1700020L11Rik; 1700008J19Rik; Norpeg
Mus musculus	Riken	ILMN_202956	ILMN_202956	A930010D23RIK	ri|A930010D23|PX00066M04|AK044382|1526					AK044382	A930010D23Rik		ILMN_1258213	004670438	S	1449	CTAGGACAAGGAGAAGGGATGGCTGTCATAAAGCTGGTGGGGGCGCTCTA										
Mus musculus	RefSeq	ILMN_197506	ILMN_319725	LOC100042960	XM_001479179.1	XM_001479179.1		100042960	149265632	XM_001479179.1	LOC100042960	XP_001479229.1	ILMN_1217101	003190253	S	1121	CCAAAGAGGACATGGAGTGGGACGAGGAGTTCTTCACACAGGAGTCCCCG	14	-	63082647-63082696	14qD1	PREDICTED: Mus musculus similar to hCG28707 (LOC100042960), mRNA.					
Mus musculus	MEEBO	ILMN_219534	ILMN_219534	4933416I08RIK	scl071159.1_0	XM_204338.1			25047118	XM_204338.1	4933416I08Rik		ILMN_1227456	005700601	S	714	GTGTGCATGACCAGTATCCACAAGAGAAAAGGAATGTTGAATCACACAAT										
Mus musculus	Riken	ILMN_205850	ILMN_205850	METAPL1	ri|A730058E16|PX00150L10|AK043123|1617					AK043123	Metapl1		ILMN_1217247	004670491	S	1544	CAGGCATTCTGTGGAGTTCTGCATTCATGGCTGTGTCTAAAGGGCATGTC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192544	ILMN_249194	ZFHX3	NM_007496.2	NM_007496.2		11906	110225363	NM_007496.2	Zfhx3	NP_031522.2	ILMN_1250928	006580376	S	11865	GTGGTCTGACCAGTGTAGGAACGGACACCTTCAGATTGTAAGCTTTGAAG	8	+	111480962-111481002:111481003-111481011	8qD3	Mus musculus zinc finger homeobox 3 (Zfhx3), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mKIAA4228; KIAA4228; A230102L03Rik; WBP9	mKIAA4228; KIAA4228; A230102L03Rik; WBP9
Mus musculus	RefSeq	ILMN_192544	ILMN_249194	ZFHX3	NM_007496.2	NM_007496.2		11906	110225363	NM_007496.2	Zfhx3	NP_031522.2	ILMN_1213439	003870068	S	13156	CTAGCGATCATCAGGATTCTCACAGAGTATTTCTGTTGGGGAGTTGAGAC	8	+	111482253-111482302	8qD3	Mus musculus zinc finger homeobox 3 (Zfhx3), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mKIAA4228; KIAA4228; A230102L03Rik; WBP9	mKIAA4228; KIAA4228; A230102L03Rik; WBP9
Mus musculus	RefSeq	ILMN_192544	ILMN_249194	ZFHX3	NM_007496.2	NM_007496.2		11906	110225363	NM_007496.2	Zfhx3	NP_031522.2	ILMN_2623793	000150605	S	11752	CTCGATGCCAACAGACGACTATTCGGAGGAGTCTGACACGGATCTCAGCC	8	+	111480849-111480898	8qD3	Mus musculus zinc finger homeobox 3 (Zfhx3), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mKIAA4228; KIAA4228; A230102L03Rik; WBP9	mKIAA4228; KIAA4228; A230102L03Rik; WBP9
Mus musculus	RefSeq	ILMN_218953	ILMN_218953	2310005G13RIK	NM_183281.1	NM_183281.1		69457	34304080	NM_183281.1	2310005G13Rik	NP_899104.1	ILMN_1257831	006580519	S	1197	CTACCGCAGCATTGAAAGCCACGATTGCCCCTACACTGTTAAAGCAGGTG	16	-	57038900-57038949	16qC1.1	Mus musculus RIKEN cDNA 2310005G13 gene (2310005G13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_190911	ILMN_190911	YME1L1	NM_013771.4	NM_013771.4		27377	146134334	NM_013771.4	Yme1l1	NP_038799.1	ILMN_1251206	001190634	S	3755	GTGCTGTTTCACTATCGACATCCAAATTGAATCCCAGTCTCAGTAAATTA				2qA3	Mus musculus YME1-like 1 (S. cerevisiae) (Yme1l1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Ftsh; FtsH1	Ftsh; FtsH1
Mus musculus	RefSeq	ILMN_190911	ILMN_190911	YME1L1	NM_013771.4	NM_013771.4		27377	146134334	NM_013771.4	Yme1l1	NP_038799.1	ILMN_2505307	006900377	S	413	ACAAAAGAGTTTCTTCCTGTTGGCATACATCTCATATTTCGGCACAGTCC				2qA3	Mus musculus YME1-like 1 (S. cerevisiae) (Yme1l1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Ftsh; FtsH1	Ftsh; FtsH1
Mus musculus	RefSeq	ILMN_190911	ILMN_190911	YME1L1	NM_013771.4	NM_013771.4		27377	146134334	NM_013771.4	Yme1l1	NP_038799.1	ILMN_2516374	000990255	S	513	CTCTAGCTTGTACAGGCAACATCCAAAAACTCTTCGAAGCATTTGTTCAG				2qA3	Mus musculus YME1-like 1 (S. cerevisiae) (Yme1l1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Ftsh; FtsH1	Ftsh; FtsH1
Mus musculus	RefSeq	ILMN_221370	ILMN_221370	CTBP1	NM_013502.2	NM_013502.2		13016	118129918	NM_013502.2	Ctbp1	NP_038530.1	ILMN_1215067	006660671	S	2178	GGTTAAAATCATGTTTGTGACTGTAACCATTTGTATGAATTATTTTAAAG	5	-	33590398-33590447	5qB1	Mus musculus C-terminal binding protein 1 (Ctbp1), mRNA. XM_922007	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	CtBP1-L; CtBP3/BARS; BARS; D4S115h; D5H4S115E; D5H4S115; CtBP1-S	CtBP1-L; CtBP3/BARS; BARS; D4S115h; D5H4S115E; D5H4S115; CtBP1-S
Mus musculus	Riken	ILMN_202763	ILMN_202763	B230206P06RIK	ri|B230206P06|PX00069C12|AK020993|755					AK020993	B230206P06Rik		ILMN_1235906	000670471	S	390	CAGATGAGTGGGGAGATTAGAGACCTGGAGAGAGGGACAGAGAGCTAGGA										
Mus musculus	RefSeq	ILMN_222392	ILMN_222392	TGFB3	NM_009368.2	NM_009368.2		21809	142377266	NM_009368.2	Tgfb3	NP_033394.1	ILMN_2748966	002510500	S	2541	GCCGCATTTCCCCTTGGATATTTGGCTAGACACCTTCCGGGTCAGGGTGT	12	-	87397980-87398029	12qD2	Mus musculus transforming growth factor, beta 3 (Tgfb3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone [goid 51491] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the transforming growth factor beta receptor [goid 5160] [evidence IEA]	MGC118722; Tgfb-3	MGC118722; Tgfb-3
Mus musculus	RefSeq	ILMN_210115	ILMN_210115	OLFR1442	NM_146697.1	NM_146697.1		258692	22129446	NM_146697.1	Olfr1442	NP_666908.1	ILMN_2858294	002630259	S	458	ATTCCTCCATCCACACTGGGGACACATTCAGGCTTTCATTTTGTGGATCC	19	+	12749154-12749203	19qA	Mus musculus olfactory receptor 1442 (Olfr1442), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR202-9	MOR202-9
Mus musculus	RefSeq	ILMN_213416	ILMN_230387	RBBP8	NM_001081223.1	NM_001081223.1		225182	124487004	NM_001081223.1	Rbbp8	NP_001074692.1	ILMN_2636859	004850379	S	2979	GAATAAACATTGATCTTTGATATTTTTTGATCCTCTATAAAATGATTTAT	18	+	11901289-11901338	18qA1	Mus musculus retinoblastoma binding protein 8 (Rbbp8), mRNA.		Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The hatching of the cellular blastocyst from the zona pellucida [goid 1835] [evidence IMP]		CtIP; 9930104E21Rik	CtIP; 9930104E21Rik
Mus musculus	RefSeq	ILMN_214136	ILMN_214136	WBSCR28	NM_029681.1	NM_029681.1		76629	34732714	NM_029681.1	Wbscr28	NP_083957.1	ILMN_2744628	005090014	S	573	ACTTGAGCCATCCTTCCAGTCCTTACCAATGCTCTTGCCTGGCCGGACCC	5	-	135186530-135186579	5qG2	Mus musculus Williams-Beuren syndrome chromosome region 28 (human) (Wbscr28), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700111I05Rik; MGC141057	1700111I05Rik; MGC141057
Mus musculus	RefSeq	ILMN_192163	ILMN_219755	D030016E14RIK	NM_177240.3	NM_177240.3		320714	62241018	NM_177240.3	D030016E14Rik	NP_796214.2	ILMN_2485577	006250037	S	3383	CTGGCACCAAACAGGAAATGCTGTATAATTTCTATCCTCTGATGGCTGGG	8	-	48578691-48578740	8qB1.1	Mus musculus RIKEN cDNA D030016E14 gene (D030016E14Rik), mRNA.				AW558465; R75422	AW558465; R75422
Mus musculus	RefSeq	ILMN_206752	ILMN_219755	D030016E14RIK	NM_177240.3	NM_177240.3		320714	62241018	NM_177240.3	D030016E14Rik	NP_796214.2	ILMN_1229793	004570437	S	609	TTTACCGCCAGGGGAAGATGTCATTGCTTCGGAGCGGGCTGCGGCCTTAT	8	-	48612369-48612408:48613314-48613323	8qB1.1	Mus musculus RIKEN cDNA D030016E14 gene (D030016E14Rik), mRNA.				AW558465; R75422	AW558465; R75422
Mus musculus	RefSeq	ILMN_217608	ILMN_318617	LOC100047749	XM_001478817.1	XM_001478817.1		100047749	149257390	XM_001478817.1	LOC100047749	XP_001478867.1	ILMN_1255207	005270132	S	3192	CCTGGGTACCTAGCAGCTGATATTTTACAACTAACATGGGGTATTTGAGT					PREDICTED: Mus musculus similar to cAMP-specific cyclic nucleotide phosphodiesterase PDE8; MMPDE8 (LOC100047749), mRNA.					
Mus musculus	RefSeq	ILMN_217931	ILMN_217931	ADAM29	NM_175939.2	NM_175939.2		244486	31341647	NM_175939.2	Adam29	NP_787953.1	ILMN_2746402	001580400	S	158	CACTATGAGTACCAGTTCTTAATTCTTCTTTGAATCAACATTTTTATAGG	8	-	58352227-58352276	8qB2	Mus musculus a disintegrin and metallopeptidase domain 29 (Adam29), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_217931	ILMN_217931	ADAM29	NM_175939.2	NM_175939.2		244486	31341647	NM_175939.2	Adam29	NP_787953.1	ILMN_2985913	003120187	S	2343	AAGGAAGTAAACGAAAGCCCCAAGTTCAGCCTACACCTGTAAAAACAAAG	8	-	58350042-58350091	8qB2	Mus musculus a disintegrin and metallopeptidase domain 29 (Adam29), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_217931	ILMN_217931	ADAM29	NM_175939.2	NM_175939.2		244486	31341647	NM_175939.2	Adam29	NP_787953.1	ILMN_1253199	003850427	S	2429	CCAGTGCCTTCCCCGAGTCTACCTCAATTAAGAATGCCATCACGATCTGC	8	-	58349956-58350005	8qB2	Mus musculus a disintegrin and metallopeptidase domain 29 (Adam29), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_215367	ILMN_215367	0610012G03RIK	scl48561.1.13_8				13384687	NM_025320	0610012G03Rik		ILMN_2658619	005700132	S	636	ACTGGTGCAGGAGAATACCAGGGGAGCTTGTAAATGGAACGACAACCCCG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_190729	ILMN_190729	B230107H12RIK	scl10612.1.1_12						B230107H12Rik		ILMN_1246346	000840241	S	20	AATACATGGGGGTCTGGCACTAGTTTGGCCATATGAGGTCAAACCCCAGT										
Mus musculus	RefSeq	ILMN_186771	ILMN_225466	PEX26	NM_028730.4	NM_028730.4		74043	146141168	NM_028730.4	Pex26	NP_083006.1	ILMN_2652077	003370762	S	3723	GGCTGTCTGTACCTTAACCACCTGCCTATCCAGCCAGGAACTCGAATCCC				6qF1	Mus musculus peroxisome biogenesis factor 26 (Pex26), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The targeting of proteins into the peroxisomal membrane. The process is not well understood, but both signals and mechanism differ from those involved in peroxisomal matrix protein import [goid 45046] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4632428M11Rik; AI853212	4632428M11Rik; AI853212
Mus musculus	RefSeq	ILMN_221004	ILMN_221004	EG328839	NM_177825.3	NM_177825.3		328839	142364417	NM_177825.3	EG328839	NP_808493.1	ILMN_2729789	002630307	S	1967	GGGGGTCACTCATCAAAGAAATGAAACATCTCACACCCTGAACTGTGTGT	17	-	52596931-52596980	17qC	Mus musculus predicted gene, EG328839 (EG328839), mRNA.				A130033B22	A130033B22
Mus musculus	RefSeq	ILMN_218631	ILMN_218631	GABRD	NM_008072.1	NM_008072.1		14403	6679912	NM_008072.1	Gabrd	NP_032098.1	ILMN_2698299	004390133	S	1376	TCTATGCCCGCGCCGTCTTCCCGGCAGCTTTTGCAGCGGTCAACATCATC	4	-	154759534-154759583	4qE2	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit delta (Gabrd), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]	MGC151213; AI853201; MGC151209	MGC151213; AI853201; MGC151209
Mus musculus	RefSeq	ILMN_218631	ILMN_218631	GABRD	NM_008072.1	NM_008072.1		14403	6679912	NM_008072.1	Gabrd	NP_032098.1	ILMN_2865082	006510170	S	1540	ATGGGACAGAGAGGAGGCTCGGCTTCTTGGGCTTTACCTCAACTTTGCTC	4	-	154759370-154759419	4qE2	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit delta (Gabrd), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]	MGC151213; AI853201; MGC151209	MGC151213; AI853201; MGC151209
Mus musculus	RefSeq	ILMN_214639	ILMN_214639	CRYBA1	NM_009965.2	NM_009965.2		12957	141802703	NM_009965.2	Cryba1	NP_034095.1	ILMN_2728094	004050072	S	532	CCTGGATATCGTGGTTATCAGTATATCTTGGAGTGTGACCACCATGGAGG	11	-	77532335-77532384	11qB5	Mus musculus crystallin, beta A1 (Cryba1), mRNA.			The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	MGC130310; BA3/A1; Cryb	MGC130310; BA3/A1; Cryb
Mus musculus	RefSeq	ILMN_216471	ILMN_216471	RAD1	NM_011232.2	NM_011232.2		19355	84872188	NM_011232.2	Rad1	NP_035362.2	ILMN_2671447	003990270	S	884	CAGGAAACTCCCATCTTGACTATCCCAAAGATTCCGACTTGGTGGAAGCC	15	+	10422540-10422589	15qA1	Mus musculus RAD1 homolog (S. pombe) (Rad1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213130	ILMN_314153	4931440L10RIK	XR_033559.1	XR_033559.1		71001	149234266	XR_033559.1	4931440L10Rik		ILMN_1213572	001470500	S	1373	CGCTAATCAGGTCGGTGGTCTCATGATCAGGCATATCTACATCTGGGGGG	1	-	136437641-136437690	1qE4	PREDICTED: Mus musculus RIKEN cDNA 4931440L10 gene (4931440L10Rik), misc RNA.					
Mus musculus	Riken	ILMN_204710	ILMN_204710	A530052K23RIK	ri|A530052K23|PX00141K23|AK040970|2453					AK040970	A530052K23Rik		ILMN_2567049	006980215	S	1919	CCCTCTTCCAAGGTTTTCTCTGAGCCTTGAAGGAGGAGCTATAGAGGTCC										
Mus musculus	MEEBO	ILMN_215588	ILMN_215588	RBM15	scl21684.2.5_0	XM_131139.4			28492572	XM_131139.4	Rbm15		ILMN_1230876	006590138	S	3727	GGCTCACACAGCTTAAAAGTAGCTGTCACTCAAACATGGGCTCACAGTTG										
Mus musculus	MEEBO	ILMN_214377	ILMN_214377	4930438O05RIK	scl078795.22_52	NM_030184.1			21313489	NM_030184.1	4930438O05Rik		ILMN_2647391	004260259	S	2146	GGGCCATGCCAGTCGCTCATCCAGATGACTACAAAGAGGGCAAGCCTGGT										
Mus musculus	RefSeq	ILMN_185561	ILMN_212123	KIFC1	NM_053173.2	NM_053173.2		16580	116642892	NM_053173.2	Kifc1	NP_444403.2	ILMN_1231176	003190477	S	215	AGAGGAACGTAGAACTGAAGGCGGCCCTGGTCAAGTCCTCCTCCCGACTG	17	+	27057761-27057810	17qA3.3	Mus musculus kinesin family member C1 (Kifc1), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence ISS]	Kifc5a; HSET; KNSL2; MGC76666	Kifc5a; HSET; KNSL2; MGC76666
Mus musculus	RefSeq	ILMN_214400	ILMN_214400	MDH1B	NM_029696.3	NM_029696.3		76668	142351457	NM_029696.3	Mdh1b	NP_083972.2	ILMN_1217555	006290711	S	1638	GCTGCCACATCCAATCCCGCTTTTGTCAATTGCTGTATGTCCTCAAAAAT	1	-	63745424-63745473	1qC2	Mus musculus malate dehydrogenase 1B, NAD (soluble) (Mdh1b), mRNA.		A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reversible conversion of pyruvate or oxaloacetate to malate [goid 16615] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1700124B08Rik; AV255588	1700124B08Rik; AV255588
Mus musculus	MEEBO	ILMN_212456	ILMN_212456	SEPT5	scl018951.1_6	XM_359275.1			38080100	XM_359275.1	Sept5		ILMN_2626648	000650139	S	1953	CCCTTACTCCCTAATCATGCTCTGTTCAGGATCGGAGGCGGCGGGGTTTG						Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220989	ILMN_220989	SPRY4	NM_011898.2	NM_011898.2		24066	31543766	NM_011898.2	Spry4	NP_036028.2	ILMN_2825817	003440692	S	3813	GGGAAAGGCTGGTTCTCCTGTAAGCACTCTGGGGGCTGAGTTTAGGCTAG	18	-	38746646-38746695	18qB3	Mus musculus sprouty homolog 4 (Drosophila) (Spry4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IDA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	sprouty4; A030006O18Rik	sprouty4; A030006O18Rik
Mus musculus	Riken	ILMN_203648	ILMN_203648	9330199J02RIK	ri|9330199J02|PX00107K13|AK034489|2834					AK034489	9330199J02Rik		ILMN_1238993	001230139	S	2766	GAAATGTTGGACACTATCCCTGGTGCTGGAGTTATGGGCAGTTAAGAGCC										
Mus musculus	RefSeq	ILMN_209745	ILMN_209745	RHBDL3	NM_139228.2	NM_139228.2		246104	34328355	NM_139228.2	Rhbdl3	NP_631974.1	ILMN_2598805	001340220	S	3294	CCGAACCCAGATCTTCCTCTAGTGTCCAATTCAGTTTGCAGATAATGAGG	11	+	80169179-80169228	11qB5	Mus musculus rhomboid, veinlet-like 3 (Drosophila) (Rhbdl3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Rhbdl4; Rhomr1; Vrho; AI847581; Rbhdl3; Ventrhoid	Rhbdl4; Rhomr1; Vrho; AI847581; Rbhdl3; Ventrhoid
Mus musculus	RefSeq	ILMN_218666	ILMN_218666	LMBR1L	NM_029098.3	NM_029098.3		74775	142344065	NM_029098.3	Lmbr1l	NP_083374.1	ILMN_2698738	006620397	S	1854	GGTGGAGCTGGGGGACTCGCTCTAGTTCCTGGACCCAAATACGTTTACAC	15	-	98734615-98734664	15qF1	Mus musculus limb region 1 like (Lmbr1l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	D15Ertd735e; AA415653; Limr; 1110013E13Rik	D15Ertd735e; AA415653; Limr; 1110013E13Rik
Mus musculus	RefSeq	ILMN_220092	ILMN_220092	CCDC51	NM_025689.1	NM_025689.1		66658	21313383	NM_025689.1	Ccdc51	NP_079965.1	ILMN_1248125	005360255	S	977	GATGGCCTGGAAAAGACTTGCAGTCAAATGGCTGGGGTGCTTCAGCTGGC	9	+	108949410-108949459	9qF2	Mus musculus coiled-coil domain containing 51 (Ccdc51), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5730568A12Rik; MGC151163; MGC151165; AI551049	5730568A12Rik; MGC151163; MGC151165; AI551049
Mus musculus	RefSeq	ILMN_222542	ILMN_222542	DECR1	NM_026172.3	NM_026172.3		67460	31982653	NM_026172.3	Decr1	NP_080448.1	ILMN_1235374	003170730	S	2875	GGCTTTGCTTCCTTCCCCTCATCCCCATCTGCTGCTTTAAACGTGTCAAT	4	-	15844421-15844470	4qA2	Mus musculus 2,4-dienoyl CoA reductase 1, mitochondrial (Decr1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: trans-2,3-didehydroacyl-CoA + NADP+ = trans,trans-2,3,4,5-tetradehydroacyl-CoA + NADPH + H+ [goid 8670] [evidence IEA]	Decr; Nadph; 1200012F07Rik	Decr; Nadph; 1200012F07Rik
Mus musculus	RefSeq	ILMN_200074	ILMN_200074	LOC385702	XM_358917.1	XM_358917.1			38080234	XM_358917.1	LOC385702		ILMN_1249319	006520176	S	1088	CTACTGGCTCCAAGTGTGGAGAACAGAAAGCAGAAAGCCCACACAGCCGC										
Mus musculus	RefSeq	ILMN_200061	ILMN_200061	LOC385604	XM_359232.1	XM_359232.1			38080170	XM_359232.1	LOC385604		ILMN_1231438	001260735	S	388	TGCGCTGAGCTGCACCACCAACCCCAGGCGTGAAACTTTCTCTTGTCATC										
Mus musculus	RefSeq	ILMN_223700	ILMN_231496	2210011C24RIK	XM_985599.1	XM_985599.1		70134	94383703	XM_985599.1	2210011C24Rik	XP_990693.1	ILMN_2767825	005050468	S	797	GAGAACCAGGGTAGGGTTACTCTCCAGATCAGCAGAAGGCCTAGAGAGGG	8	-	86534280-86534329	8qC3	PREDICTED: Mus musculus RIKEN cDNA 2210011C24 gene (2210011C24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_208774	ILMN_311981	LOC100045430	XM_001474434.1	XM_001474434.1		100045430	149266898	XM_001474434.1	LOC100045430	XP_001474484.1	ILMN_1251890	000070132	S	346	GGGAGGCCCTCCCATGATGCCAATGATGGGCCCCCCTCCGCCCGGAATGA					PREDICTED: Mus musculus similar to U1 snRNP-specific protein C (LOC100045430), mRNA.					
Mus musculus	RefSeq	ILMN_213874	ILMN_213874	MRPL48	NM_026971.2	NM_026971.2		52443	38505258	NM_026971.2	Mrpl48	NP_081247.2	ILMN_2663679	001070482	S	224	TGTGGACCAGTCGGCACTACAAGACAAAGCCCACTCGTGGCATCGGAAGA	7	-	107713735-107713784	7qE3	Mus musculus mitochondrial ribosomal protein L48 (Mrpl48), transcript variant 1, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	D4Ertd786e; CGI-118; 1810030E20Rik; 2610028L11Rik	D4Ertd786e; CGI-118; 1810030E20Rik; 2610028L11Rik
Mus musculus	Riken	ILMN_205480	ILMN_205480	D030048H11RIK	ri|D030048H11|PX00180C24|AK050974|1383					AK050974	D030048H11Rik		ILMN_1238026	006940538	S	863	GCCCCGAGACACACACACACACAGGACAATGGGTGAGTTCATGATAGGAT										
Mus musculus	RefSeq	ILMN_186307	ILMN_226239	PNPLA2	NM_025802.2	NM_025802.2		66853	142351628	NM_025802.2	Pnpla2	NP_080078.1	ILMN_2687745	002900730	S	1640	CTGTGCCTTACTCCTGCCCACCACCTTTTCAGTGCAGGGTCAGTCTTAAG	7	+	148645834-148645883	7qF5	Mus musculus patatin-like phospholipase domain containing 2 (Pnpla2), mRNA.	Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of triacylglycerol, any triester of glycerol [goid 19433] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IMP]	Atgl; TTS-2.2; 0610039C21Rik; 1110001C14Rik	Atgl; TTS-2.2; 0610039C21Rik; 1110001C14Rik
Mus musculus	RefSeq	ILMN_198235	ILMN_198235	LOC333756	XM_290007.2	XM_290007.2			38083141	XM_290007.2	LOC333756		ILMN_1214443	002030707	S	2119	CCCCGTACTGGCATTGTGGATATTCCTATTCTTACTACAGGAATGAGGGT										
Mus musculus	RefSeq	ILMN_215380	ILMN_215380	CXCR3	NM_009910.2	NM_009910.2		12766	118129823	NM_009910.2	Cxcr3	NP_034040.1	ILMN_2658786	005810576	S	1451	GTAGAACTCAGCCATCCCTGTGTGAGAAGAGGGAGAGGCAAATAGCACAG	X	-	98926982-98927031	XqD	Mus musculus chemokine (C-X-C motif) receptor 3 (Cxcr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	Cmkar3; Cd183	Cmkar3; Cd183
Mus musculus	MEEBO	ILMN_209655	ILMN_209655	4932443D20	scl31187.5.1_273				51749646	XM_489187	4932443D20		ILMN_2597894	002260209	S	3177	TTCCTTCATCCAACCCCTTTTATGTATTTTCCTCCTCAAAACTCATTGCC										
Mus musculus	RefSeq	ILMN_205276	ILMN_232360	TRRAP	XM_988979.1	XM_988979.1		100683	94376949	XM_988979.1	Trrap	XP_994073.1	ILMN_1216487	005270593	S	466	CTGATCGGCTCTGGGTACACCGCTCGGGAGACACTCAGGTACAGCATTAG				5qG2	PREDICTED: Mus musculus transformation/transcription domain-associated protein, transcript variant 1 (Trrap), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217919	ILMN_217919	NDP	NM_010883.2	NM_010883.2		17986	61098076	NM_010883.2	Ndp	NP_035013.1	ILMN_1255523	007200671	S	1782	GCTATATCCACCTGTCTATGTGAAGCTTGTTGCCGTAGTGGTGGCCCGAC	X	-	16462744-16462793	XqA1.2	Mus musculus Norrie disease (pseudoglioma) (human) (Ndp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]		NDP; ND	NDP; ND
Mus musculus	RefSeq	ILMN_185344	ILMN_259219	PSMB8	NM_010724.1	NM_010724.1		16913	6755207	NM_010724.1	Psmb8	NP_034854.1	ILMN_2693940	002900136	S	456	CAAGCTGCTTTCCAACATGATGCTGCAGTACCGGGGGATGGGCCTCTCCA	17	+	34336361-34336410	17qB1	Mus musculus proteasome (prosome, macropain) subunit, beta type 8 (large multifunctional peptidase 7) (Psmb8), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	Lmp7; Lmp-7	Lmp7; Lmp-7
Mus musculus	RefSeq	ILMN_223433	ILMN_223433	HMGCLL1	NM_173731.2	NM_173731.2		208982	118130046	NM_173731.2	Hmgcll1	NP_776092.1	ILMN_2764047	000620441	S	3107	CTATCCAGGAAACCTTGCAGTCATTGCATGACCCATTGGAAAAAACAAAC	9	+	75983649-75983698	9qD	Mus musculus 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 (Hmgcll1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetyl-CoA + acetoacetate [goid 4419] [evidence IEA]	BC037381; MGC36512	BC037381; MGC36512
Mus musculus	MEEBO	ILMN_187450	ILMN_187450	STK32A	scl14952.1.1_293				31343402	NM_178749	Stk32a		ILMN_1233272	007570307	S	2	AGTGTGCCTGCTCGCCTGCTCAATGTGAAACCCCGAGACTCCACATTTCA							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222490	ILMN_222490	OLFR1424	NM_146681.1	NM_146681.1		258676	33239019	NM_146681.1	Olfr1424	NP_666892.1	ILMN_2750274	004830746	S	708	CATCTCCACTTGCACCACCCACATCACTGTGGTCACCCTGCATTTTGTCC	19	-	12133483-12133532	19qA	Mus musculus olfactory receptor 1424 (Olfr1424), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR239-2	MOR239-2
Mus musculus	RefSeq	ILMN_253388	ILMN_253388	RTP4	NM_023386.3	NM_023386.3		67775	32129268	NM_023386.3	Rtp4	NP_075875.2	ILMN_2873988	002760577	S	1380	GGGCAGCAGGTGATGACATAAGCCTAGGTCCCAGGGAGAAGCCTAGTGGA	16	+	23529386-23529435	16qB1	Mus musculus receptor transporter protein 4 (Rtp4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5830458K16Rik; Ifrg28	5830458K16Rik; Ifrg28
Mus musculus	RefSeq	ILMN_215525	ILMN_215525	SERGEF	NM_013789.1	NM_013789.1		27414	7305092	NM_013789.1	Sergef	NP_038817.1	ILMN_1249444	003170672	S	1311	GCCGTGGACAGAGACAGACTGGAAGGAGAGACGATCAGTGACCTCAACCC	7	-	53698611-53698660	7qB4	Mus musculus secretion regulating guanine nucleotide exchange factor (Sergef), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ran family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5087] [evidence ISA]	DelGEF; Gnef; MGC141209; Gnefr; MGC141208; Gef	DelGEF; Gnef; MGC141209; Gnefr; MGC141208; Gef
Mus musculus	RefSeq	ILMN_193696	ILMN_251192	TBC1D1	NM_019636.2	NM_019636.2		57915	120587002	NM_019636.2	Tbc1d1	NP_062610.2	ILMN_2711782	003940142	S	3871	CGATTGACCGCTGCCAGAAGAGACTGTGCACCATTAACACTGTCCAAGCC	5	+	64741164-64741169:64741170-64741213	5qC3.1	Mus musculus TBC1 domain family, member 1 (Tbc1d1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AI385682; MGC144097; 1110062G02Rik; MGC106104; mKIAA1108; Tbc1; AW555803	AI385682; MGC144097; 1110062G02Rik; MGC106104; mKIAA1108; Tbc1; AW555803
Mus musculus	RefSeq	ILMN_193696	ILMN_251192	TBC1D1	NM_019636.2	NM_019636.2		57915	120587002	NM_019636.2	Tbc1d1	NP_062610.2	ILMN_1245907	002360520	S	5180	TAAATGGCCAGGAGGGATGTAAGACTCCCACATGGTCTTGGGTCAGAGGA	5	+	64742473-64742522	5qC3.1	Mus musculus TBC1 domain family, member 1 (Tbc1d1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AI385682; MGC144097; 1110062G02Rik; MGC106104; mKIAA1108; Tbc1; AW555803	AI385682; MGC144097; 1110062G02Rik; MGC106104; mKIAA1108; Tbc1; AW555803
Mus musculus	RefSeq	ILMN_208951	ILMN_208951	OLFR355	NM_146625.1	NM_146625.1		258618	33239287	NM_146625.1	Olfr355	NP_666836.1	ILMN_2591119	000430253	S	593	TTGTGATAGTGACAGAAGGAGCTCTTGTTTTGGTGACTCCCTTCCTATGC	2	-	36782990-36783039	2qB	Mus musculus olfactory receptor 355 (Olfr355), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR138-2	MOR138-2
Mus musculus	RefSeq	ILMN_222684	ILMN_229161	OLFR698	NM_146602.2	NM_146602.2		258595	153791688	NM_146602.2	Olfr698	NP_666813.2	ILMN_1213368	002690673	S	478	AGCATCTACACCATGCAGTATTCCTTCTGCAAAAATCGTCAGATCAATCA				7qE3	Mus musculus olfactory receptor 698 (Olfr698), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR283-3	MOR283-3
Mus musculus	MEEBO	ILMN_222840	ILMN_222840	AA407526	scl0003944.1_28	NM_182768.1			33354233	NM_182768.1	AA407526		ILMN_1234166	002320064	S	1432	GGAAGCTTGGGGCATTACAGATATTAAATAGAACCTGACATCCTTCTAGG										
Mus musculus	RefSeq	ILMN_210625	ILMN_315537	LOC100046044	XM_001475459.1	XM_001475459.1		100046044	149264524	XM_001475459.1	LOC100046044	XP_001475509.1	ILMN_2607529	007160307	S	3372	ACCCTTTGCTTCTTATAATGAGTGCGATATATGTTGTCGAGGCTGTTCTT					PREDICTED: Mus musculus similar to COUP-TFI (LOC100046044), mRNA.					
Mus musculus	RefSeq	ILMN_214499	ILMN_214499	ARFGAP3	NM_025445.4	NM_025445.4		66251	146135067	NM_025445.4	Arfgap3	NP_079721.2	ILMN_2648618	001090427	S	2217	TCACTGCGACCTGGGAGTAAACAGGGTGTCGCTGCCCTGTGAGAGGAAGA				15qE1	Mus musculus ADP-ribosylation factor GTPase activating protein 3 (Arfgap3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	Arfgap1; 1810035F16Rik; 1810004P07Rik; 0610009H19Rik; 9130416J18Rik	Arfgap1; 1810035F16Rik; 1810004P07Rik; 0610009H19Rik; 9130416J18Rik
Mus musculus	RefSeq	ILMN_219354	ILMN_219354	LCE1M	NM_025420.2	NM_025420.2		66203	113865967	NM_025420.2	Lce1m	NP_079696.1	ILMN_2707612	005270408	S	652	GCCTAGGGTCTCCTCTTCTCTGGTTTTCCCGCAGAAGTACTTAGAACTCT	3	-	92821904-92821953	3qF1	Mus musculus late cornified envelope 1M (Lce1m), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			AI131654; MGC129452; Lce5a; MGC129453; Sprrl10; 1110059L13Rik	AI131654; MGC129452; Lce5a; MGC129453; Sprrl10; 1110059L13Rik
Mus musculus	MEEBO	ILMN_216566	ILMN_216566	CREBBP	scl48815.9.1_11	XM_148699.3			38079677	XM_148699.3	Crebbp		ILMN_2695020	004250674	S	2061	AGCACTGGTGTTCGAAAAGGCTGGCATGAACATGTGACTCAGGACCTACG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The region of a condensed chromosome kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions [goid 940] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51091] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process involved in preventing uncommitted germ-line stem cells from differentiating as another cell type [goid 30718] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]		
Mus musculus	RefSeq	ILMN_192798	ILMN_192798	V1RC13	NM_134168.1	NM_134168.1		171186	21717656	NM_134168.1	V1rc13	NP_598929.1	ILMN_2491429	004570017	S	853	AATCGAATACTCATGATTCTAAAAAGTATGCAAAAAATATGGCACCAGAT	6	-	66726222-66726271	6qC1	Mus musculus vomeronasal 1 receptor, C13 (V1rc13), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	Riken	ILMN_204521	ILMN_204521	B230339M05RIK	ri|B230339M05|PX00160O16|AK046067|3845					AK046067	B230339M05Rik		ILMN_2565610	004890541	S	3210	GAGGAGTCCAAATAATTACAGTGGATTTAGAGTGCTCTTGGGTGCCAGTC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184499	ILMN_232078	VCL	NM_009502.4	NM_009502.4		22330	118130355	NM_009502.4	Vcl	NP_033528.3	ILMN_2419138	004120703	S	5090	GGAGGCAAAAGGAAACAGTCCCTGAATGACGTGTTAGAGATGCCACCACT	14	+	21852756-21852805	14qA3	Mus musculus vinculin (Vcl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [evidence IDA]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [evidence ISO]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IDA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA571387; 9430097D22; AI462105; AW545629	AA571387; 9430097D22; AI462105; AW545629
Mus musculus	RefSeq	ILMN_196400	ILMN_196400	5430405C01RIK	XM_138000.3	XM_138000.3			38049457	XM_138000.3	5430405C01Rik		ILMN_2523980	007510095	S	2790	GAGGGCAGAATGGTCTCATGCTCGCTTCTCCCAGTGGCTGGATGATCACC										
Mus musculus	RefSeq	ILMN_210713	ILMN_210713	ATP6V0D1	NM_013477.2	NM_013477.2		11972	31981303	NM_013477.2	Atp6v0d1	NP_038505.2	ILMN_2928320	005360047	S	1138	GCCCAGCGCCATCGCGCCAAGATCGACAACTACATCCCCATCTTTTAGCA	8	-	108414028-108414031:108414032-108414077	8qD3	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit D1 (Atp6v0d1), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	Vma6; P39; Atp6d; AI267038; Ac39; VATX	Vma6; P39; Atp6d; AI267038; Ac39; VATX
Mus musculus	RefSeq	ILMN_234200	ILMN_234200	NAV3	NM_001081035.1	NM_001081035.1		260315	124486647	NM_001081035.1	Nav3	NP_001074504.1	ILMN_3101677	003390022	A	5108	ACTGGGTGAACTCTAGAGGAAGTGAGCTGAGAAGTTCTTTCAAGCAAGCC	10	-	109155398-109155422:109156122-109156142:109157013-109157016	10qD1	Mus musculus neuron navigator 3 (Nav3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Pomfil1p; unc53H3; POMFIL1; 9630020C08Rik; 4732483H20Rik; mKIAA0938	Pomfil1p; unc53H3; POMFIL1; 9630020C08Rik; 4732483H20Rik; mKIAA0938
Mus musculus	RefSeq	ILMN_234200	ILMN_234200	NAV3	NM_001081035.1	NM_001081035.1		260315	124486647	NM_001081035.1	Nav3	NP_001074504.1	ILMN_3028518	004890470	I	1918	TCAGAAAATGAAGGCACCTCTTTACCACCTGCTGACTCCTGTACCAGTCC	10	-	109278817-109278866	10qD1	Mus musculus neuron navigator 3 (Nav3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Pomfil1p; unc53H3; POMFIL1; 9630020C08Rik; 4732483H20Rik; mKIAA0938	Pomfil1p; unc53H3; POMFIL1; 9630020C08Rik; 4732483H20Rik; mKIAA0938
Mus musculus	RefSeq	ILMN_196685	ILMN_246717	SETD2	NM_001081340.1	NM_001081340.1		235626	124486750	NM_001081340.1	Setd2	NP_001074809.1	ILMN_2525395	007330528	S	5876	ACCGGAAACCTGACTGCAAGGTGGGCAGGATCACCACCACTGAAGATTTC	9	+	110519972-110520021	9qF2	Mus musculus SET domain containing 2 (Setd2), mRNA.				4921524K10Rik; BC031601	4921524K10Rik; BC031601
Mus musculus	RefSeq	ILMN_217414	ILMN_246717	SETD2	NM_001081340.1	NM_001081340.1		235626	124486750	NM_001081340.1	Setd2	NP_001074809.1	ILMN_2682936	006220291	S	6608	CGCAGGCTGCCTTGTGGTTTGGCCGCCTTGTGCTATGTTGATAAGATTGA	9	+	110520986-110521035	9qF2	Mus musculus SET domain containing 2 (Setd2), mRNA.				4921524K10Rik; BC031601	4921524K10Rik; BC031601
Mus musculus	RefSeq	ILMN_246717	ILMN_246717	SETD2	NM_001081340.1	NM_001081340.1		235626	124486750	NM_001081340.1	Setd2	NP_001074809.1	ILMN_3045217	005810750	I	4256	AGTTACCCACATCTGAACCGGAGGCAGACACGGAGACAGAGCCCAAAGAC	9	+	110476561-110476610	9qF2	Mus musculus SET domain containing 2 (Setd2), mRNA.				4921524K10Rik; BC031601	4921524K10Rik; BC031601
Mus musculus	RefSeq	ILMN_197736	ILMN_197736	LOC223347	XM_139322.1	XM_139322.1			20897258	XM_139322.1	LOC223347		ILMN_2529186	006560537	S	165	AGGCAATGGCCAGTCAAGATTTTTCATAAATGGGCTGACACCTGGGGCCC										
Mus musculus	MEEBO	ILMN_216805	ILMN_216805	BC002236	scl079560.1_5	NM_024475.2			46575894	NM_024475.2	BC002236		ILMN_2675587	004890551	S	1389	TCATCTGCCTGAGTCTGAGACCAAATCTGTCTTCAAACTAGCTAGTGCTT										
Mus musculus	RefSeq	ILMN_201196	ILMN_243929	PRDM10	NM_001080817.1	NM_001080817.1		382066	124249098	NM_001080817.1	Prdm10	NP_001074286.1	ILMN_1239769	004210358	S	1546	AGGAGGCGCTGCTGATGAAGCCCTTGTTACAGAGATCACAGGTCAACGGG	9	+	31154558-31154607	9qA4	Mus musculus PR domain containing 10 (Prdm10), mRNA.				tristanin; MGC73898; Gm1112	tristanin; MGC73898; Gm1112
Mus musculus	RefSeq	ILMN_243929	ILMN_243929	PRDM10	NM_001080817.1	NM_001080817.1		382066	124249098	NM_001080817.1	Prdm10	NP_001074286.1	ILMN_3151396	000380193	A	495	AGTGTTCTCCAAAAGACGGATTCCCAAGCGCACCCAGTTCGGCCCAGTGG	9	+	31135040-31135089	9qA4	Mus musculus PR domain containing 10 (Prdm10), mRNA.				tristanin; MGC73898; Gm1112	tristanin; MGC73898; Gm1112
Mus musculus	RefSeq	ILMN_197382	ILMN_197382	LOC380878	XM_354785.1	XM_354785.1			38075495	XM_354785.1	LOC380878		ILMN_1259930	003130670	S	689	CCCAGAACTCTGTGTGGAGCCCAGGAGCCCTGATGCCTGCTAAGACTTAC										
Mus musculus	RefSeq	ILMN_251983	ILMN_251983	BRD1	NM_001033274.1	NM_001033274.1		223770	85701781	NM_001033274.1	Brd1	NP_001028446.1	ILMN_3033940	000290523	I	4536	TCATTGAAAGCACCACATTCCGTTTCTTGGGCCCCTGTAGGCTTGTGGCT	15	-	88526733-88526782	15qE3	Mus musculus bromodomain containing 1 (Brd1), mRNA. XM_922207	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA4191; mKIAA4191; 1110059H06Rik; AI316859	KIAA4191; mKIAA4191; 1110059H06Rik; AI316859
Mus musculus	RefSeq	ILMN_212632	ILMN_212632	S100A3	NM_011310.2	NM_011310.2		20197	118130205	NM_011310.2	S100a3	NP_035440.1	ILMN_2628668	006270228	S	475	CTGTGGTACCCCTTTCAATCTAGACTTGCCAAGTTCTTGATGTGCTAACC	3	+	90406387-90406436	3qF1	Mus musculus S100 calcium binding protein A3 (S100a3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	S100E	S100E
Mus musculus	RefSeq	ILMN_217280	ILMN_217280	MAPRE2	NM_153058.3	NM_153058.3		212307	142353377	NM_153058.3	Mapre2	NP_694698.2	ILMN_1229743	006860543	S	3899	GCTTCATGTCCATTTTACATTACCCATCTACTGTCGCATGGTAGGATAGC	18	+	24052231-24052280	18qA2	Mus musculus microtubule-associated protein, RP/EB family, member 2 (Mapre2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]	RP1; EB1; C820009F03Rik; D18Abb1e; AI314113; EB2	RP1; EB1; C820009F03Rik; D18Abb1e; AI314113; EB2
Mus musculus	RefSeq	ILMN_213534	ILMN_213534	ATP2A3	NM_016745.2	NM_016745.2		53313	31542158	NM_016745.2	Atp2a3	NP_058025.2	ILMN_2638017	006370594	S	3092	CATTTATGCAGGCTCGGAGTAGGCAGCTGCCGACTACTTCCAGGACCCCA	11	+	72792237-72792286	11qB4	Mus musculus ATPase, Ca++ transporting, ubiquitous (Atp2a3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Serca3; SERCA3b	Serca3; SERCA3b
Mus musculus	RefSeq	ILMN_213534	ILMN_213534	ATP2A3	NM_016745.2	NM_016745.2		53313	31542158	NM_016745.2	Atp2a3	NP_058025.2	ILMN_2688236	002570672	S	4431	CTTGGCAGGAGCAGAGCGCTGTGCCCACTTGCTGATTGTTTCTGATGGAG	11	+	72795262-72795311	11qB4	Mus musculus ATPase, Ca++ transporting, ubiquitous (Atp2a3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Serca3; SERCA3b	Serca3; SERCA3b
Mus musculus	RefSeq	ILMN_213534	ILMN_213534	ATP2A3	NM_016745.2	NM_016745.2		53313	31542158	NM_016745.2	Atp2a3	NP_058025.2	ILMN_2900462	000060288	S	4160	CTGCTGTTGCCCCTTTGACAAAAGCTAGCTAACTGTCACAGGAAACGGAG	11	+	72794038-72794087	11qB4	Mus musculus ATPase, Ca++ transporting, ubiquitous (Atp2a3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Serca3; SERCA3b	Serca3; SERCA3b
Mus musculus	RefSeq	ILMN_201357	ILMN_201357	LOC382527	XM_356552.1	XM_356552.1			38091655	XM_356552.1	LOC382527		ILMN_1254391	002630494	S	310	CGGCTGAGTAAGCTCAAGAGGGCCAGCAGCGAGGACACACTCAACAAACC										
Mus musculus	RefSeq	ILMN_223590	ILMN_223590	TICAM2	NM_173394.2	NM_173394.2		225471	34328395	NM_173394.2	Ticam2	NP_775570.1	ILMN_2955020	000060193	S	3036	CCACCCTTCACACGCCTGCCAAGCTAGAACTGATGCTCAATGGCACTTCT	18	-	46718062-46718111	18qC	Mus musculus toll-like receptor adaptor molecule 2 (Ticam2), mRNA.	A protein complex that binds interleukin-1; comprises an alpha and a beta subunit [goid 45323] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45357] [evidence ISA]; Any process that modulates the frequency, rate, or extent of production of a cytokine [goid 1817] [evidence IMP]; Any process that modulates an I-kappaB kinase/NF-kappaB induced cascade [goid 43122] [evidence ISA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence ISA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISA]	Trif; B430113A10; TICAM-2; MGC107370; TRAM; Tirp	Trif; B430113A10; TICAM-2; MGC107370; TRAM; Tirp
Mus musculus	RefSeq	ILMN_215777	ILMN_310147	E230029C05RIK	XM_001473432.1	XM_001473432.1		319711	149257586	XM_001473432.1	E230029C05Rik	XP_001473482.1	ILMN_1246132	001770192	S	646	CCTCTAGTCCAAAGGCCATTCATGTTCAATATGTTAGCACTCGGAGCGTC	7	+	97197411-97197460	7qE1	PREDICTED: Mus musculus RIKEN cDNA E230029C05 gene (E230029C05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198036	ILMN_198036	LOC280097	XM_207108.3	XM_207108.3			38080760	XM_207108.3	LOC280097		ILMN_1235034	005290523	S	936	CCATCCCAGGCTACTATACTCAGCCAAACTCTCAATTACCATAGATGGAG										
Mus musculus	Riken	ILMN_205073	ILMN_205073	D330040L23RIK	ri|D330040L23|PX00192K22|AK052366|2850					AK052366	D330040L23Rik		ILMN_1213374	001450725	S	2527	AGCAGCTAGTCAAAGGCATAACCAAAGGCAGAGGGAGAATGGGTGTGTGC										
Mus musculus	RefSeq	ILMN_209305	ILMN_209305	NSDHL	NM_010941.3	NM_010941.3		18194	31982436	NM_010941.3	Nsdhl	NP_035071.3	ILMN_2594525	000990338	S	395	AGGCTTTGATAACCCCCGGGTGCAGTTCTTTATAGGCGACCTGTGCAACC	X	+	70175067-70175116	XqA7.3	Mus musculus NAD(P) dependent steroid dehydrogenase-like (Nsdhl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + 3-beta-hydroxy-4-alpha-methyl-5-alpha-cholest-7-ene-4-beta-carboxylate = NAD(P)H + H+ + CO2 + 4-alpha-methyl-5-alpha-cholest-7-en-3-one [goid 47012] [evidence IEA]	H105E3; Bpa; AI747449; Str; XAP104	H105E3; Bpa; AI747449; Str; XAP104
Mus musculus	RefSeq	ILMN_209305	ILMN_209305	NSDHL	NM_010941.3	NM_010941.3		18194	31982436	NM_010941.3	Nsdhl	NP_035071.3	ILMN_2958207	004830717	S	1881	GTGTGCTGTGTTAGCTGGTCAGCTCCTAATAAACAGGAGATGATGGCTGC	X	+	70203530-70203579	XqA7.3	Mus musculus NAD(P) dependent steroid dehydrogenase-like (Nsdhl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + 3-beta-hydroxy-4-alpha-methyl-5-alpha-cholest-7-ene-4-beta-carboxylate = NAD(P)H + H+ + CO2 + 4-alpha-methyl-5-alpha-cholest-7-en-3-one [goid 47012] [evidence IEA]	H105E3; Bpa; AI747449; Str; XAP104	H105E3; Bpa; AI747449; Str; XAP104
Mus musculus	RefSeq	ILMN_209305	ILMN_209305	NSDHL	NM_010941.3	NM_010941.3		18194	31982436	NM_010941.3	Nsdhl	NP_035071.3	ILMN_2725402	002650653	S	210	GCCATAATGGAACAAGCTGTTCATGGTGAATCAAAGCGAGGCCAGGTCAC	X	+	70171669-70171674:70171675-70171718	XqA7.3	Mus musculus NAD(P) dependent steroid dehydrogenase-like (Nsdhl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + 3-beta-hydroxy-4-alpha-methyl-5-alpha-cholest-7-ene-4-beta-carboxylate = NAD(P)H + H+ + CO2 + 4-alpha-methyl-5-alpha-cholest-7-en-3-one [goid 47012] [evidence IEA]	H105E3; Bpa; AI747449; Str; XAP104	H105E3; Bpa; AI747449; Str; XAP104
Mus musculus	RefSeq	ILMN_209305	ILMN_209305	NSDHL	NM_010941.3	NM_010941.3		18194	31982436	NM_010941.3	Nsdhl	NP_035071.3	ILMN_2594521	005820603	S	388	CCACCAAGGCTTTGATAACCCCCGGGTGCAGTTCTTTATAGGCGACCTGT	X	+	70175060-70175109	XqA7.3	Mus musculus NAD(P) dependent steroid dehydrogenase-like (Nsdhl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + 3-beta-hydroxy-4-alpha-methyl-5-alpha-cholest-7-ene-4-beta-carboxylate = NAD(P)H + H+ + CO2 + 4-alpha-methyl-5-alpha-cholest-7-en-3-one [goid 47012] [evidence IEA]	H105E3; Bpa; AI747449; Str; XAP104	H105E3; Bpa; AI747449; Str; XAP104
Mus musculus	RefSeq	ILMN_212609	ILMN_212609	CDH20	NM_011800.4	NM_011800.4		23836	146134464	NM_011800.4	Cdh20	NP_035930.1	ILMN_2628406	000670379	S	3372	CCTTCGTAAAAGCCAGAAGGAAAGCAGAAAAGCTGCCTCGTGCACTGTAG				1qE2.1	Mus musculus cadherin 20 (Cdh20), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cdh7; MGC141415	Cdh7; MGC141415
Mus musculus	RefSeq	ILMN_212609	ILMN_212609	CDH20	NM_011800.4	NM_011800.4		23836	146134464	NM_011800.4	Cdh20	NP_035930.1	ILMN_2748427	007100187	S	1977	GCACCGGCACGCTTACCATTCAAGTGTGCAGCTGCAATGACGATGGCCAC				1qE2.1	Mus musculus cadherin 20 (Cdh20), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cdh7; MGC141415	Cdh7; MGC141415
Mus musculus	Riken	ILMN_205031	ILMN_205031	A430088H15RIK	ri|A430088H15|PX00138H07|AK040354|2231					AK040354	A430088H15Rik		ILMN_1247070	001410670	S	1851	TGTCTGCTGTGGAAGGGAAGAGGATCTGAAGAAGCCGTGAGCTGTCACTC										
Mus musculus	RefSeq	ILMN_218667	ILMN_218667	OLFR820	NM_146675.1	NM_146675.1		258670	33239323	NM_146675.1	Olfr820	NP_666886.1	ILMN_2823628	001430162	S	464	CTGTGCCACATGCAATGACTCTTCAGTTGCCTTTCTGTGCATCCAACATC	10	+	129454882-129454931	10qD3	Mus musculus olfactory receptor 820 (Olfr820), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR116-1	MOR116-1
Mus musculus	RefSeq	ILMN_217117	ILMN_217117	CDK5	NM_007668.3	NM_007668.3		12568	142348589	NM_007668.3	Cdk5	NP_031694.1	ILMN_1216721	007100154	S	1756	CTCATGTAACCTGCCACTTCCACCTTCTCGCTGAGCTAGTTAGAACCTCG	5	-	23924312-23924361	5qA3	Mus musculus cyclin-dependent kinase 5 (Cdk5), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant [goid 42220] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IMP]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of proteins from the nucleus into the cytoplasm [goid 46826] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31397] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of calcium ion-dependent exocytosis [goid 45956] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence ISA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; The process of introducing a phosphate group to a serine residue of the STAT3 protein [goid 33136] [evidence IDA]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; The process whose specific outcome is the progression of the cerebellar cortex over time, from its formation to the mature structure. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21695] [evidence IMP]; The process that gives rise to the cerebellar cortex. This process pertains to the initial formation of a structure from unspecified parts. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21697] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex [goid 21819] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IMP]; The process aimed at the progression of a Schwann cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14044] [evidence IMP]; Any process that modulates the establishment or extent of the postsynaptic membrane potential, which is generated by changes in the membrane potential of the post synaptic neuron that receives information at a synapse. The presynaptic neuron releases neurotransmitters into the synaptic cleft which bind to receptors on the postsynaptic neuron. After being bound by the neurotransmitters, these receptors can open or close an ion channel, allowing ions to enter or leave the cell and therefore altering the membrane potential of the postsynaptic neuron [goid 60078] [evidence IMP]; The process whose specific outcome is the progression of the corpus callosum over time, from its formation to the mature structure. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provide communication between the right and left cerebral hemispheres [goid 22038] [evidence IMP]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IMP]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]; A process that decreases synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 31914] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 32801] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [evidence IDA]; Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is increased [goid 30549] [evidence IDA]; Interacting selectively with the protein-tyrosine kinase receptor ErbB-3/HER3 [goid 43125] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISO]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Interacting selectively with one of the p53 family of proteins [goid 2039] [evidence IPI]	Crk6; AW048668	Crk6; AW048668
Mus musculus	RefSeq	ILMN_184997	ILMN_184997	ZCCHC11	NM_175472.3	NM_175472.3		230594	83977460	NM_175472.3	Zcchc11	NP_780681.2	ILMN_2423339	001090437	S	1122	GGATAAAAGGAAGAGTGAAGCTCTACAGGGAGAAAAGTCAGCTCTGGAAA	4	+	108152201-108152250	4qC7	Mus musculus zinc finger, CCHC domain containing 11 (Zcchc11), mRNA. XM_897202 XM_897210 XM_897221 XM_897225 XM_897236 XM_916010 XM_924060 XM_924064 XM_924066 XM_924069 XM_924071 XM_924077 XM_924079 XM_924083 XM_924089	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IDA]; Any process that modulates the frequency, rate or extent of signaling in response to detection of lipopolysaccharide [goid 31664] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9230115F04Rik; KIAA0191; 6030404K05Rik; PPAPD3; mKIAA0191	9230115F04Rik; KIAA0191; 6030404K05Rik; PPAPD3; mKIAA0191
Mus musculus	RefSeq	ILMN_186982	ILMN_184997	ZCCHC11	NM_175472.3	NM_175472.3		230594	83977460	NM_175472.3	Zcchc11	NP_780681.2	ILMN_2440145	001170259	S	5812	TTGTTCTTAAGGATTAGGAAAGGATTTCATGTGTTTTAAATTTGTCACTT	4	+	108231778-108231827	4qC7	Mus musculus zinc finger, CCHC domain containing 11 (Zcchc11), mRNA. XM_897202 XM_897210 XM_897221 XM_897225 XM_897236 XM_916010 XM_924060 XM_924064 XM_924066 XM_924069 XM_924071 XM_924077 XM_924079 XM_924083 XM_924089	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IDA]; Any process that modulates the frequency, rate or extent of signaling in response to detection of lipopolysaccharide [goid 31664] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9230115F04Rik; KIAA0191; 6030404K05Rik; PPAPD3; mKIAA0191	9230115F04Rik; KIAA0191; 6030404K05Rik; PPAPD3; mKIAA0191
Mus musculus	RefSeq	ILMN_184997	ILMN_184997	ZCCHC11	NM_175472.3	NM_175472.3		230594	83977460	NM_175472.3	Zcchc11	NP_780681.2	ILMN_1231967	002600170	S	2596	GTTGCCCGGAGCTTAAACAGCCAGCTTGTATACGAATATGTTGTGGAAAG	4	+	108185500-108185549	4qC7	Mus musculus zinc finger, CCHC domain containing 11 (Zcchc11), mRNA. XM_897202 XM_897210 XM_897221 XM_897225 XM_897236 XM_916010 XM_924060 XM_924064 XM_924066 XM_924069 XM_924071 XM_924077 XM_924079 XM_924083 XM_924089	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IDA]; Any process that modulates the frequency, rate or extent of signaling in response to detection of lipopolysaccharide [goid 31664] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9230115F04Rik; KIAA0191; 6030404K05Rik; PPAPD3; mKIAA0191	9230115F04Rik; KIAA0191; 6030404K05Rik; PPAPD3; mKIAA0191
Mus musculus	RefSeq	ILMN_186616	ILMN_257719	CRKL	NM_007764.4	NM_007764.4		12929	145966723	NM_007764.4	Crkl	NP_031790.2	ILMN_2621338	006840682	S	3693	GGGTTTCCCTTTTCCCAAGACTGTTGACCAGCAAGACTCTAAGGAATACT				16qA3	Mus musculus v-crk sarcoma virus CT10 oncogene homolog (avian)-like (Crkl), mRNA.		The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Crkol; 1110025F07Rik; AA589403; AI325100	Crkol; 1110025F07Rik; AA589403; AI325100
Mus musculus	Riken	ILMN_204960	ILMN_204960	D430030C18RIK	ri|D430030C18|PX00194L13|AK052464|1287					AK052464	D430030C18Rik		ILMN_1253270	001340725	S	1046	AGGAGGCGGCAGTGGAAGAACACGGCTGCTGACTTCAGTGTTTTGCTGGC										
Mus musculus	RefSeq	ILMN_193539	ILMN_193539	TUSC5	NM_177709.2	NM_177709.2		237858	31343238	NM_177709.2	Tusc5	NP_808377.1	ILMN_2831768	007000253	S	2942	CTGAGCAGAGGGGAGTACAGGGCAGGAGGAGAGAGACATTAGGGTGGGAA	11	+	76511871-76511920	11qB5	Mus musculus tumor suppressor candidate 5 (Tusc5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism [goid 9607] [evidence IEA]		RP23-343C18.2; LOST1; C130069F04Rik	RP23-343C18.2; LOST1; C130069F04Rik
Mus musculus	RefSeq	ILMN_222825	ILMN_222825	OLFR1228	NM_146971.1	NM_146971.1		258973	22128984	NM_146971.1	Olfr1228	NP_667182.1	ILMN_2755352	005960767	S	791	CATGCTTTTTAATATATGCACGACCTCCTTCTGCTTTCTCTTCTGAAAAA	2	-	89089009-89089058	2qE1	Mus musculus olfactory receptor 1228 (Olfr1228), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR233-1	MOR233-1
Mus musculus	RefSeq	ILMN_221070	ILMN_221070	1700047I17RIK1	NM_028527.1	NM_028527.1		73385	37537561	NM_028527.1	1700047I17Rik1	NP_082803.1	ILMN_3034034	006020445	I	1274	TCCTACAGCCTCGGTATAAAGTACCCCTAGAGTTTACACAAGGACGGTTC	12	+	56240502-56240551	12qC1	Mus musculus RIKEN cDNA 1700047I17 gene 1 (1700047I17Rik1), mRNA.				D730001C10Rik; 1700047I17Rik; C14orf24	D730001C10Rik; 1700047I17Rik; C14orf24
Mus musculus	RefSeq	ILMN_221070	ILMN_221070	1700047I17RIK1	NM_028527.1	NM_028527.1		73385	37537561	NM_028527.1	1700047I17Rik1	NP_082803.1	ILMN_3107690	006590139	A	247	AAGAAGAAAGTCCCGAGGAGGGTCATCCACTTTGTCAGTGGAGAGACAAT	12	+	56231654-56231703	12qC1	Mus musculus RIKEN cDNA 1700047I17 gene 1 (1700047I17Rik1), mRNA.				D730001C10Rik; 1700047I17Rik; C14orf24	D730001C10Rik; 1700047I17Rik; C14orf24
Mus musculus	RefSeq	ILMN_212585	ILMN_212585	DYDC1	XM_127632.5	XM_127632.5		69496	94396917	XM_127632.5	Dydc1	XP_127632.5	ILMN_1226008	006040274	S	870	CAAGGGCCCTAACATGTATTTTTCTCTTTTCAAACTTGGACCCTACTCCC	14	+	41905361-41905410	14qB	PREDICTED: Mus musculus DPY30 domain containing 1 (Dydc1), mRNA.					
Mus musculus	MEEBO	ILMN_194398	ILMN_194398	2610305D13RIK	scl23536.7_579				21489950	NM_145078	2610305D13Rik		ILMN_2776728	004860497	S	2164	TCAAGATAACAACTGATTTATGACCCCCTTTTGTTCTAGTCAACAACTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217001	ILMN_244238	RPL17	NM_001002239.2	NM_001002239.2		319195	142383739	NM_001002239.2	Rpl17	NP_001002239.1	ILMN_2677935	002850131	S	677	GAGAAGCATGTTATTAAACAGTGAAATAGATGGTTCAAAACCACGTGACC	18	+	75162982-75163031	18qE3	Mus musculus ribosomal protein L17 (Rpl17), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC118163; MGC103289	MGC118163; MGC103289
Mus musculus	RefSeq	ILMN_215889	ILMN_215889	SLC25A20	NM_020520.4	NM_020520.4		57279	146134898	NM_020520.4	Slc25a20	NP_065266.1	ILMN_2664821	004920014	S	1598	AAGAAAGCTACAATTGTCTAAATCCCCAGGAGAAAGTAGAGAATTTTCCC				9qF2	Mus musculus solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20 (Slc25a20), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1110007P09Rik; Cact; C78826; mCAC	1110007P09Rik; Cact; C78826; mCAC
Mus musculus	MEEBO	ILMN_193801	ILMN_193801	SCL0002377.1_1	scl0002377.1_1	AK029786.1			26325723	AK029786.1	scl0002377.1_1		ILMN_2505360	005090438	S	11	GCCGCTCTGCTTTGTAGAGAGAGAAGCTAGTGAGCTTCGAAGAGGACGCT										
Mus musculus	RefSeq	ILMN_220798	ILMN_248118	THRAP2	NM_172424.2	NM_172424.2		76199	51100965	NM_172424.2	Thrap2	NP_766012.2	ILMN_1219193	006370546	S	6742	AATGCCGGCCTTTTTTAGAGCATTCCCTATACCCGCACTGTGACGCCTTC	5	+	119023938-119023987	5qF	Mus musculus thyroid hormone receptor associated protein 2 (Thrap2), mRNA.				mKIAA1025; 2210413I17Rik; 9030618F05Rik; 6330591G05Rik; Trap240L	mKIAA1025; 2210413I17Rik; 9030618F05Rik; 6330591G05Rik; Trap240L
Mus musculus	RefSeq	ILMN_216347	ILMN_216347	C79407	NM_172578.2	NM_172578.2		217653	31044420	NM_172578.2	C79407	NP_766166.2	ILMN_1229468	004640673	S	3297	GGGAATGCAGATTTGTTTCCCAATGTCTTATGTTTGTATGCACCCTATAG	12	-	66234391-66234440	12qC1	Mus musculus expressed sequence C79407 (C79407), mRNA.				6720403H11; KIAA1903; mKIAA1903	6720403H11; KIAA1903; mKIAA1903
Mus musculus	RefSeq	ILMN_216347	ILMN_216347	C79407	NM_172578.2	NM_172578.2		217653	31044420	NM_172578.2	C79407	NP_766166.2	ILMN_2843349	003850358	S	3578	AAACTTTTAGCATCATGCAGCCTGAAATTACAAGCCAGGGTTCCTTCTGT	12	-	66234110-66234159	12qC1	Mus musculus expressed sequence C79407 (C79407), mRNA.				6720403H11; KIAA1903; mKIAA1903	6720403H11; KIAA1903; mKIAA1903
Mus musculus	Riken	ILMN_206844	ILMN_206844	D430006B11RIK	ri|D430006B11|PX00193D09|AK084890|1347					AK084890	D430006B11Rik		ILMN_2583093	004760019	S	814	CGCAGTTGATCAGCTTGGAAGCAACAGGCAAATGTTTGAATATGATGGGA										
Mus musculus	RefSeq	ILMN_220206	ILMN_311135	1700065J11RIK	XM_001477919.1	XM_001477919.1		73409	149254997	XM_001477919.1	1700065J11Rik	XP_001477969.1	ILMN_1221783	000870075	S	271	CAGGCTACGATAATACACGGAGGAGAATCTTCTCACTGTGGGATACAAGC				6qB1	PREDICTED: Mus musculus RIKEN cDNA 1700065J11 gene (1700065J11Rik), mRNA.					
Mus musculus	MEEBO	ILMN_184736	ILMN_184736	ITGBL1	scl45118.1.1674_70				21703925	NM_145467	Itgbl1		ILMN_2421146	004290722	S	19	CCATGATGGGAAGGTTAGTGACTCTTAATGCTTGGAAGTCGCCCACCACA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211515	ILMN_211515	PPP1R1A	NM_021391.3	NM_021391.3		58200	126517503	NM_021391.3	Ppp1r1a	NP_067366.1	ILMN_2616584	001300288	S	639	GGTATCCGGGGATCACCACTGCAGTGTGGAAATTCATGGACACTGGATGT	15	-	103361316-103361365	15qF3	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 1A (Ppp1r1a), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	0610038N18Rik; I-1	0610038N18Rik; I-1
Mus musculus	Riken	ILMN_203367	ILMN_203367	9330176N13RIK	ri|9330176N13|PX00106J02|AK034319|1472					AK034319	9330176N13Rik		ILMN_2556766	004050487	S	876	AGAGGACAGAGTTCTGGTTGTCAAGGTAAAGGGTGGAGAAGAAACCCGGG										
Mus musculus	MEEBO	ILMN_219024	ILMN_219024	BC031575	scl0001787.1_100	NM_153549.2			33186869	NM_153549.2	BC031575		ILMN_2703242	002940253	S	1483	GCAGCGCAATTCTCCGCTTCATAAACCAGGACAGTGCAGAGCGGGCCCAG										
Mus musculus	RefSeq	ILMN_212630	ILMN_212630	CDH1	NM_009864.2	NM_009864.2		12550	118129809	NM_009864.2	Cdh1	NP_033994.1	ILMN_2628629	005820184	S	4327	TTTGTGGGGGGTGGAAAAGGTAAGCCATTGAAACCGTTCTCTAAGATGCA	8	+	109194060-109194109	8qD3	Mus musculus cadherin 1 (Cdh1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]	AA960649; Um; Ecad; UVO; L-CAM; MGC107495	AA960649; Um; Ecad; UVO; L-CAM; MGC107495
Mus musculus	Riken	ILMN_206508	ILMN_206508	CRF-R 2, CRF2, CRH-R2, CRF-RB, GPCR	ri|D830017O21|PX00198D10|AK085854|2927					AK085854	CRF-R 2, CRF2, CRH-R2, CRF-RB, GPCR		ILMN_1237542	004900164	S	2550	CCACCTAAGGAAATGGTCTGTCTGGTTGGTTCTAGCGCCTTCCGGGGGTC										
Mus musculus	RefSeq	ILMN_212041	ILMN_212041	EPB4.1L5	NM_145506.3	NM_145506.3		226352	142368941	NM_145506.3	Epb4.1l5	NP_663481.2	ILMN_1238873	000520255	S	2574	GAAGCAATGAAGGTAACTAGTTTCCTGCAAACTGATGGCTCCACCTAGCG	1	-	121445432-121445481	1qE2.3	Mus musculus erythrocyte protein band 4.1-like 5 (Epb4.1l5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	The process whose specific outcome is the progression of the axial mesoderm over time, from its formation to the mature structure. The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord [goid 48318] [evidence IMP]; The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube [goid 48339] [evidence IMP]	Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AL022914; 1700030C16Rik; BE37; NBL5	AL022914; 1700030C16Rik; BE37; NBL5
Mus musculus	RefSeq	ILMN_200118	ILMN_200118	LOC385763	XM_358935.1	XM_358935.1			38080484	XM_358935.1	LOC385763		ILMN_1249208	000510671	S	1146	GTTACTCACCACACTTTCAAGAGCCAAAGTCTCCCAGGCTACCGCGCTGC										
Mus musculus	RefSeq	ILMN_200841	ILMN_200841	LOC382232	XM_358718.1	XM_358718.1			38086471	XM_358718.1	LOC382232		ILMN_2540196	005820072	S	163	TTGAAGCGAATGTTCTGCTATCCACAGTCCTTTCCACGGAAACCTGGGCC										
Mus musculus	Riken	ILMN_204406	ILMN_204406	A230021I02RIK	ri|A230021I02|PX00126H21|AK038512|1329					AK038512	A230021I02Rik		ILMN_1254267	001440669	S	1126	CATGCAGGCGTTGGACTGAGAAGCAAAGGCAGGCTAGGGCCAGAAGCAAC										
Mus musculus	RefSeq	ILMN_198374	ILMN_198374	LOC381186	XM_355114.1	XM_355114.1			38084660	XM_355114.1	LOC381186		ILMN_1212960	007550446	S	537	GGGACACCAACTCAGGGACACCTTTCCTCTTTCCACCTGGGATTCACTGG										
Mus musculus	RefSeq	ILMN_220135	ILMN_254944	RBM4	NM_009032.2	NM_009032.2		19653	86262143	NM_009032.2	Rbm4	NP_033058.2	ILMN_2769133	006590204	S	1345	GGTTGTGCATGAGAATACACCCTTCGTGGTGCCCCATCTCCGGGACGTTC	19	-	4785484-4785533	19qA	Mus musculus RNA binding motif protein 4 (Rbm4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Lark1; Rbm4a; 4921506I22Rik; Mlark; lark	Lark1; Rbm4a; 4921506I22Rik; Mlark; lark
Mus musculus	RefSeq	ILMN_209955	ILMN_209955	INTS3	NM_145540.2	NM_145540.2		229543	31652265	NM_145540.2	Ints3	NP_663515.2	ILMN_2697279	003450192	S	3877	CCAGGGCCTCCAGCTCTTTTCACCCCCTCTTCACTGCTGCTCCCACTGGT	3	-	90195835-90195884	3qF1	Mus musculus integrator complex subunit 3 (Ints3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			C77668	C77668
Mus musculus	RefSeq	ILMN_209955	ILMN_209955	INTS3	NM_145540.2	NM_145540.2		229543	31652265	NM_145540.2	Ints3	NP_663515.2	ILMN_2711570	006220367	S	4245	TCTTGCTGCACCTGGGATGCTTGGGTTGGCCCGGCATTGGCACTTCAAGC	3	-	90195467-90195516	3qF1	Mus musculus integrator complex subunit 3 (Ints3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			C77668	C77668
Mus musculus	RefSeq	ILMN_209955	ILMN_209955	INTS3	NM_145540.2	NM_145540.2		229543	31652265	NM_145540.2	Ints3	NP_663515.2	ILMN_1229435	004880551	S	3113	CTGGCAGCTCTTCCTGGCCCACAACATCCCCTTGGAGACCATTATTCCTA	3	-	90198019-90198068	3qF1	Mus musculus integrator complex subunit 3 (Ints3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			C77668	C77668
Mus musculus	RefSeq	ILMN_189514	ILMN_245678	4930471G03RIK	XR_005419.1	XR_005419.1		74966	94404715	XR_005419.1	4930471G03Rik		ILMN_1258454	006980392	S	33	CATCCTGCCCACTGTCTCTAGTCTTCATGGCCAGCTCATAGTTCTTGAAG					PREDICTED: Mus musculus RIKEN cDNA 4930471G03 gene (4930471G03Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_197916	ILMN_242833	EG242914	XR_001540.2	XR_001540.2		242914	149253830	XR_001540.2	EG242914		ILMN_1213603	007100243	S	707	ACCGTTCTGTGAGAGCAAGTTGACACAGCTGCTGAGGGCCTCGTTCACTG	5	-	30423091-30423140	5qB1	PREDICTED: Mus musculus predicted gene, EG242914 (EG242914), misc RNA.					
Mus musculus	RefSeq	ILMN_218192	ILMN_218192	PBSN	NM_017471.2	NM_017471.2		54192	142369561	NM_017471.2	Pbsn	NP_059499.1	ILMN_2692759	004670671	S	719	TCCCATGTTCTAATCGGTATTAGTGCATCTTTGAATGTTTAAATAAATTT	X	-	75083250-75083299	XqA7.3	Mus musculus probasin (Pbsn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an odorant, any substance capable of stimulating the sense of smell [goid 5549] [evidence IEA]	PB; Prbs	PB; Prbs
Mus musculus	RefSeq	ILMN_220705	ILMN_220705	ERAS	NM_181548.2	NM_181548.2		353283	31581542	NM_181548.2	Eras	NP_853526.1	ILMN_2844838	002320497	S	784	CAGGAGGCTGTGGCCGAATCAAGCAAGAAGACCCGACACCAGAAAGCCGT	X	-	7501645-7501694	XqA1.1	Mus musculus ES cell-expressed Ras (Eras), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	ecat5; HRasp; Ha-Ras2; HRAS2	ecat5; HRasp; Ha-Ras2; HRAS2
Mus musculus	RefSeq	ILMN_190195	ILMN_190195	ZFP341	NM_199304.1	NM_199304.1		228807	40556275	NM_199304.1	Zfp341	NP_955008.2	ILMN_1221742	001010196	S	2932	CTCAGACGACTGTATGAGGTGAGCATGTAAGAGGCACTTATCCTGGGGCG	2	+	154472261-154472310	2qH1	Mus musculus zinc finger protein 341 (Zfp341), mRNA.				MGC73471; Znf341	MGC73471; Znf341
Mus musculus	RefSeq	ILMN_198969	ILMN_250031	CNTN5	XM_974864.2	XM_974864.2		244682	149259445	XM_974864.2	Cntn5	XP_979958.2	ILMN_1257409	007510458	S	544	CCAAGTGAACTCAGGGATTCTGGCCTGTACCAGTGCTTAGCCACCAACTC	9	-	10144132-10144181	9qA1	PREDICTED: Mus musculus contactin 5 (Cntn5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198968	ILMN_250031	CNTN5	XM_974864.2	XM_974864.2		244682	149259445	XM_974864.2	Cntn5	XP_979958.2	ILMN_1213082	006940706	S	3257	CAGGTGGGAAAATCACAAGCGCTCAGTCAACCCTGCACTCTCTCTCCAAG	9	-	9661416-9661463:9666837-9666838	9qA1	PREDICTED: Mus musculus contactin 5 (Cntn5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_250651	ILMN_250651	TLK2	NM_011903.1	NM_011903.1		24086	6755804	NM_011903.1	Tlk2	NP_036033.1	ILMN_2940510	000870646	S	3523	GCTTCCCTCGCCTCAGTAGGGAGAAACAGTGGGAGTTCTGAGATGCCTGG	11	+	105098072-105098121	11qE1	Mus musculus tousled-like kinase 2 (Arabidopsis) (Tlk2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Tlk; PKUalpha	Tlk; PKUalpha
Mus musculus	RefSeq	ILMN_200794	ILMN_311576	LOC100043796	XM_001481075.1	XM_001481075.1		100043796	149256683	XM_001481075.1	LOC100043796	XP_001481125.1	ILMN_1245646	006040487	S	121	GGGTCACGTAGCTCAGGTCCCTGGCTTGGGTCACACCGCGCTTTGTACCG	7	-	30750618-30750667	7qB1	PREDICTED: Mus musculus similar to macrophage migration inhibitory factor, transcript variant 1 (LOC100043796), mRNA.					
Mus musculus	MEEBO	ILMN_213172	ILMN_213172	ERBB2IP	scl059079.1_41	XM_358312.1			38075019	XM_358312.1	Erbb2ip		ILMN_2645048	006330431	S	315	CACCCCCCTCAGGCATCTGTGGCAAGGCATCCCTCTAGAGAACAACTAAT						The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221335	ILMN_221335	SNTA1	NM_009228.1	NM_009228.1		20648	6678056	NM_009228.1	Snta1	NP_033254.1	ILMN_2734142	004860114	S	1933	TCCTGGAGGCCTCTAAGCCACCCTGAGATCTCTGCAGCTGGAGTCTTCTG	2	-	154202191-154202240	2qH1	Mus musculus syntrophin, acidic 1 (Snta1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]	The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Snt1; AW228934	Snt1; AW228934
Mus musculus	RefSeq	ILMN_193246	ILMN_193246	V1RI7	NM_134224.1	NM_134224.1		171258	21717756	NM_134224.1	V1ri7	NP_598985.1	ILMN_2495367	002370180	S	774	CACAGGTTCCACAGTGGCAAATGATTTCACAATACCAAGTATGAAAGCGT	13	-	22593291-22593340	13qA3.1	Mus musculus vomeronasal 1 receptor, I7 (V1ri7), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_210262	ILMN_210262	SENP3	NM_030702.3	NM_030702.3		80886	141802397	NM_030702.3	Senp3	NP_109627.2	ILMN_1225635	003990215	S	1824	CAGCTTCACCCAGCAGGACATGCCCAAACTCCGTCGTCAGATCTACAAGG	11	-	69487056-69487105	11qB3	Mus musculus SUMO/sentrin specific peptidase 3 (Senp3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]	Smt3ip1; Smt3ip; AA408656	Smt3ip1; Smt3ip; AA408656
Mus musculus	RefSeq	ILMN_192626	ILMN_192626	TRPC2	NM_011644.2	NM_011644.2		22064	154090944	NM_011644.2	Trpc2	NP_035774.2	ILMN_1256523	007610390	S	3991	CAGAAGGGTCTCTTCTGTCACTAAGTGCAGCTGCTGTGTTGGGTAGAGCC				7qE3	Mus musculus transient receptor potential cation channel, subfamily C, member 2 (Trpc2), transcript variant 1, mRNA.	The portion of the plasma membrane surrounding a dendrite [goid 32590] [evidence IMP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence ISO]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	Aggressive behavior based on competition between males of the same species over access to resources such as females, dominance, status, etc. and characterized by noise, threats, and is often less injurious [goid 2121] [evidence IMP]; Aggressive behavior performed in defence of a fixed area against intruders, typically conspecifics [goid 2124] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The repair of single strand breaks in DNA. Repair of such breaks is mediated by the same enzyme systems as are used in base excision repair [goid 12] [evidence IEA]; The actions or reactions of individuals for the purpose of discriminating between the sexes, for the purpose of finding a suitable mating partner [goid 48047] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IMP]; The actions or reactions of a female, for the purpose of attracting a sexual partner [goid 8050] [evidence IMP]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IPI]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 15279] [evidence IDA]	Trrp2; mTrp2; TRPC2a; smTRPC2; trp2; 3010009O07Rik; AI115608; TRPC2b	Trrp2; mTrp2; TRPC2a; smTRPC2; trp2; 3010009O07Rik; AI115608; TRPC2b
Mus musculus	RefSeq	ILMN_210511	ILMN_210511	BRUNOL6	NM_175235.3	NM_175235.3		76183	34328408	NM_175235.3	Brunol6	NP_780444.2	ILMN_1236448	000130592	S	2427	CTCAAGGTATATGTAGAGGGCTGTGACAACAGACGTGGAAGGCTTGCTGC	9	+	59454761-59454810	9qB	Mus musculus bruno-like 6, RNA binding protein (Drosophila) (Brunol6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	CELF6; 6330569O16Rik	CELF6; 6330569O16Rik
Mus musculus	Riken	ILMN_205398	ILMN_205398	E030038G15RIK	ri|E030038G15|PX00206D06|AK053210|3388					AK053210	E030038G15Rik		ILMN_1229701	000160338	S	3106	AGCCTAAGTCCCAAAGTGGGCACCACCTATAGTCACCAAATGGCCCATGC										
Mus musculus	RefSeq	ILMN_199454	ILMN_199454	LOC383494	XM_357094.1	XM_357094.1			38049394	XM_357094.1	LOC383494		ILMN_1236814	003450520	S	230	ATCAAGTGTCCCCAAAGGCTCCTAGAAACCTGAGCCCTGAAGCTGAGGGC										
Mus musculus	Riken	ILMN_205873	ILMN_205873	C130048M12RIK	ri|C130048M12|PX00170A14|AK048317|2588					AK048317	C130048M12Rik		ILMN_1258215	006480328	S	2199	CACTGTGTCCTGTGGGCATCCAGTGAAGAATCCTGCTGAGTGATGAAGAG										
Mus musculus	RefSeq	ILMN_220407	ILMN_220407	ADAT1	NM_013925.3	NM_013925.3		30947	141802291	NM_013925.3	Adat1	NP_038953.1	ILMN_1256624	003130026	S	2829	CGACGTAGCAGCTAACCCTGTTTAACTGTCACCTAGGAGAGAGCACTCAG	8	-	114491088-114491137	8qE1	Mus musculus adenosine deaminase, tRNA-specific 1 (Adat1), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a tRNA molecule [goid 8251] [evidence ISS]	mADAT1; MMADAT1	mADAT1; MMADAT1
Mus musculus	RefSeq	ILMN_220407	ILMN_220407	ADAT1	NM_013925.3	NM_013925.3		30947	141802291	NM_013925.3	Adat1	NP_038953.1	ILMN_2721666	006760315	S	1603	GGATACAGCCGTTTGCGTCCTGGATCAGAAACCCACCCGACTACCACCAA	8	-	114492314-114492363	8qE1	Mus musculus adenosine deaminase, tRNA-specific 1 (Adat1), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a tRNA molecule [goid 8251] [evidence ISS]	mADAT1; MMADAT1	mADAT1; MMADAT1
Mus musculus	RefSeq	ILMN_261251	ILMN_261251	HCN3	NM_008227.1	NM_008227.1		15168	6680190	NM_008227.1	Hcn3	NP_032253.1	ILMN_2808472	006060477	S	2969	GGCCCTCCTTGTCCACACCAAGTGAGAATCCACGTCTGCCCACTGTAGTC	3	-	88950940-88950989	3qF1	Mus musculus hyperpolarization-activated, cyclic nucleotide-gated K+ 3 (Hcn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Hac3; Hcn4; BCNG-4; Bcng4	Hac3; Hcn4; BCNG-4; Bcng4
Mus musculus	Riken	ILMN_202828	ILMN_202828	MSN	ri|5930420P08|PX00055E09|AK031171|1885					AK031171	Msn		ILMN_1229193	001780474	S	1377	GTGCCCTGGGACTCTTTCCTCGTCAGTGGCATGAAGTCTGAGATGGCATA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_203820	ILMN_203820	A230050B20RIK	ri|A230050B20|PX00128B15|AK038610|974					AK038610	A230050B20Rik		ILMN_1246860	003890068	S	609	CAGCCTTACAGTGAGGAGGACTGCTCAGACTAGACACTGTTCTGTCCCCC										
Mus musculus	RefSeq	ILMN_226105	ILMN_226105	CYP2B23	NM_001081148.1	NM_001081148.1		243881	124487254	NM_001081148.1	Cyp2b23	NP_001074617.1	ILMN_2976211	001410224	S	361	TGGAAGACCCTTCGGCGATTCTCTCTGGCCACCATGAGAGACTTTGGGAT	7	-	27466407-27466456	7qA3	Mus musculus cytochrome P450, family 2, subfamily b, polypeptide 23 (Cyp2b23), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	EG243881	EG243881
Mus musculus	RefSeq	ILMN_198569	ILMN_226105	CYP2B23	NM_001081148.1	NM_001081148.1		243881	124487254	NM_001081148.1	Cyp2b23	NP_001074617.1	ILMN_1235256	000240112	S	1385	CCGTGGCTCCTGAAGACATTGACCTGACTCCCAAGGAGAGTGGCTTTGTC	7	-	27450993-27451042	7qA3	Mus musculus cytochrome P450, family 2, subfamily b, polypeptide 23 (Cyp2b23), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	EG243881	EG243881
Mus musculus	RefSeq	ILMN_209643	ILMN_209643	GNA14	NM_008137.3	NM_008137.3		14675	142382121	NM_008137.3	Gna14	NP_032163.2	ILMN_2597778	006350324	S	3171	GCGCTGTGCCTTTCTGGATACTAAGAATACACTGTTCTACCCTGAACACC	19	+	16685191-16685240	19qA-qB	Mus musculus guanine nucleotide binding protein, alpha 14 (Gna14), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	AU023208	AU023208
Mus musculus	RefSeq	ILMN_202071	ILMN_253840	LOC641366	XM_981039.1	XM_981039.1		641366	94363572	XM_981039.1	LOC641366	XP_986133.1	ILMN_1224237	003890376	S	1210	ATCTGGCCAAGGTAAGAGAGGTTATGCAGGGAGCGACTGAGCCCCCCTCA					PREDICTED: Mus musculus hypothetical ENV polyprotein (LOC641366), mRNA.					
Mus musculus	RefSeq	ILMN_260045	ILMN_260045	EG624219	NM_001080940.1	NM_001080940.1		624219	124301203	NM_001080940.1	EG624219	NP_001074409.1	ILMN_2996704	003520095	S	794	GGAGGGCTGGAAAAAGACACGAGCCCCCTTATGCCCACACACCCCACAAT	9	+	21641720-21641769	9qA3	Mus musculus predicted gene, EG624219 (EG624219), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	Riken	ILMN_203053	ILMN_203053	A930002C11RIK	ri|A930002C11|PX00065G04|AK044223|1960					AK044223	A930002C11Rik		ILMN_1215441	003940364	S	620	AAGAGGCTGTAGTGAAGGCCTTATCTCCCCAGGTGGACAGCGGCCCTGTG										
Mus musculus	RefSeq	ILMN_184178	ILMN_184178	TTLL1	NM_178869.3	NM_178869.3		319953	142362607	NM_178869.3	Ttll1	NP_849200.1	ILMN_1234107	006060687	S	1251	AGTGATGAACAACGACAAACACTGCTTTGAATGCTACGGCTACGACATCA	15	-	83323007-83323056	15qE1	Mus musculus tubulin tyrosine ligase-like 1 (Ttll1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	AV014541; 6330444E16Rik	AV014541; 6330444E16Rik
Mus musculus	RefSeq	ILMN_184178	ILMN_184178	TTLL1	NM_178869.3	NM_178869.3		319953	142362607	NM_178869.3	Ttll1	NP_849200.1	ILMN_1253538	003610170	S	1667	CACAGTCGCTCCACCCAGTCCCTGCTAAACACCCGTTTTGGAATTTCAGT	15	-	83314526-83314575	15qE1	Mus musculus tubulin tyrosine ligase-like 1 (Ttll1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	AV014541; 6330444E16Rik	AV014541; 6330444E16Rik
Mus musculus	RefSeq	ILMN_218010	ILMN_218010	NECAP1	NM_026267.2	NM_026267.2		67602	142370343	NM_026267.2	Necap1	NP_080543.2	ILMN_1240590	001300307	S	1915	TTACAGTGCTGTGAAGAGCTCCCGTTGAGGTTGGTGGGTACTGTCCTTTG	6	+	122838481-122838530	6qF2	Mus musculus NECAP endocytosis associated 1 (Necap1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IDA]; A clathrin coat found on a vesicle [goid 30125] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mFLJ00061; FLJ00061; 1200016B17Rik; AI747569	mFLJ00061; FLJ00061; 1200016B17Rik; AI747569
Mus musculus	RefSeq	ILMN_233092	ILMN_233092	1810064F22RIK	NM_001033151.1	NM_001033151.1		69862	85701661	NM_001033151.1	1810064F22Rik	NP_001028323.1	ILMN_2858523	002030465	S	2205	TGGTGGCTCACAACCATCTGTAACAAGACCTGATGCCCTCTTCTGGTGTC	9	-	21957235-21957284	9qA3	Mus musculus RIKEN cDNA 1810064F22 gene (1810064F22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198547	ILMN_198547	LOC194744	XM_110743.3	XM_110743.3			38086108	XM_110743.3	LOC194744		ILMN_2532075	001090593	S	645	GGAATGGACCCCGGGACCGCTTTTCTCACCTGCAGAACTTTGCCAATGTC										
Mus musculus	RefSeq	ILMN_208926	ILMN_208926	DPYS	NM_022722.2	NM_022722.2		64705	31981240	NM_022722.2	Dpys	NP_073559.2	ILMN_2590869	006550463	S	2347	GAAATTACACATGACATTTAGAACTGAATAACGGTTCCAATTGCCTCTGA	15	-	39600102-39600151	15qB3.1	Mus musculus dihydropyrimidinase (Dpys), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: 5,6-dihydrouracil + H2O = 3-ureidopropionate [goid 4157] [evidence TAS]	1300004I01Rik; 1200017I10Rik; DHPase	1300004I01Rik; 1200017I10Rik; DHPase
Mus musculus	RefSeq	ILMN_216170	ILMN_239190	PHACTR2	NM_001033257.3	NM_001033257.3		215789	146198566	NM_001033257.3	Phactr2	NP_001028429.1	ILMN_1222623	005360348	S	1738	CCATAATGAAGCGTGGAACTGCTCGGAAATAAAGACTGACTGCCCCCGGC				10qA2	Mus musculus phosphatase and actin regulator 2 (Phactr2), mRNA.				BC012871	BC012871
Mus musculus	MEEBO	ILMN_188571	ILMN_188571	4732490P12	scl0330787.4_174				51764159	XM_486119	4732490P12		ILMN_2453810	000830129	S	13	CATGCTGATGAGTGTTACCAGAGCATTTCACTTGGGAATATTCTAGACAC										
Mus musculus	RefSeq	ILMN_198521	ILMN_227081	LOC637908	XM_980991.1	XM_980991.1		637908	94381649	XM_980991.1	LOC637908	XP_986085.1	ILMN_1229409	004890278	S	87	GCAGAGTCCTCGCTTTGACCGTCCTGGAGATGTAATTGTGGGTGGCAGCT				7qA1	PREDICTED: Mus musculus similar to putative pheromone receptor (Go-VN5) (LOC637908), mRNA.					
Mus musculus	RefSeq	ILMN_210908	ILMN_210908	MYT1L	NM_008666.1	NM_008666.1		17933	6678999	NM_008666.1	Myt1l	NP_032692.1	ILMN_2950189	003180243	S	4092	AGCCAGTCCCTGATCCACAGCCTCGCCAACATCCAGCTGCCTCACATGGA	12	+	30506033-30506082	12qA2	Mus musculus myelin transcription factor 1-like (Myt1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	mKIAA1106; 2900046C06Rik; Nztf1; 2900093J19Rik; C630034G21Rik; Pmng1; Png-1	mKIAA1106; 2900046C06Rik; Nztf1; 2900093J19Rik; C630034G21Rik; Pmng1; Png-1
Mus musculus	RefSeq	ILMN_199305	ILMN_331647	4933403O03RIK	XM_001481264.1	XM_001481264.1		74399	149261222	XM_001481264.1	4933403O03Rik	XP_001481314.1	ILMN_1240756	004220113	S	745	CCAGACTTCCCAAGTGGCACAATCCTGTGGAGCAGGCCAAGAAGATGCCT				10qB4	PREDICTED: Mus musculus RIKEN cDNA 4933403O03 gene (4933403O03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199810	ILMN_199810	LOC383043	XM_356818.1	XM_356818.1			38077529	XM_356818.1	LOC383043		ILMN_1226420	004220093	S	316	TACCGATACCGTTCCTCGCCGTCGCCTGTAGATGCGCCTCGCTGTGTCTA										
Mus musculus	RefSeq	ILMN_223501	ILMN_223501	BANP	NM_016812.2	NM_016812.2		53325	124248563	NM_016812.2	Banp	NP_058092.2	ILMN_1229817	001940674	S	2047	ACAGACAAGAACTACGATATTTTGTTTAAACAGCTTTTTTAATTTGCTAT	8	+	124549764-124549813	8qE1	Mus musculus Btg3 associated nuclear protein (Banp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SMAR1; AA408158	SMAR1; AA408158
Mus musculus	RefSeq	ILMN_253243	ILMN_253243	SLC16A13	NM_172371.1	NM_172371.1		69309	29336096	NM_172371.1	Slc16a13	NP_758959.1	ILMN_2797825	002350358	S	2191	GAGCCTCACCATGTAGCCCAAGCTACTCTTGAACTTGAGAACTGGCCTCC	11	-	70033274-70033323	11qB3	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 13 (Slc16a13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	RP23-198E14.5; 1700007D07Rik	RP23-198E14.5; 1700007D07Rik
Mus musculus	RefSeq	ILMN_188121	ILMN_310497	LOC100047208	XM_001477976.1	XM_001477976.1		100047208	149254986	XM_001477976.1	LOC100047208	XP_001478026.1	ILMN_2463006	003990022	S	543	CTGGGAAGATCACTGGTAACATGGTCTGTGCTGGCTTCCTAGAGGGAGGC					PREDICTED: Mus musculus similar to trypsinogen 15 (LOC100047208), mRNA.					
Mus musculus	RefSeq	ILMN_209186	ILMN_222366	CRBN	NM_021449.2	NM_021449.2		58799	90403611	NM_021449.2	Crbn	NP_067424.2	ILMN_1251315	005050022	S	3232	CATACTTACGTCTATCACAAAGTCTTGGTATGGTTTCAATGGTTCTGAAC	6	-	106728994-106729043	6qE1	Mus musculus cereblon (Crbn), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]	AW108261; 2610203G15Rik; AF229032; piL	AW108261; 2610203G15Rik; AF229032; piL
Mus musculus	RefSeq	ILMN_222366	ILMN_222366	CRBN	NM_021449.2	NM_021449.2		58799	90403611	NM_021449.2	Crbn	NP_067424.2	ILMN_3139771	004860064	A	3667	GCAGCATGTCTTGTGAAGCTCAGGAGCTGTGATCATATCAGGTACCAGCA	6	-	106728559-106728608	6qE1	Mus musculus cereblon (Crbn), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]	AW108261; 2610203G15Rik; AF229032; piL	AW108261; 2610203G15Rik; AF229032; piL
Mus musculus	RefSeq	ILMN_209186	ILMN_222366	CRBN	NM_021449.2	NM_021449.2		58799	90403611	NM_021449.2	Crbn	NP_067424.2	ILMN_1254540	005290754	S	3943	CCCAACCTGCAAAACCAGTAAGCTTCATCAAATTCAGGTGTTCTCTCTGA	6	-	106728283-106728332	6qE1	Mus musculus cereblon (Crbn), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]	AW108261; 2610203G15Rik; AF229032; piL	AW108261; 2610203G15Rik; AF229032; piL
Mus musculus	RefSeq	ILMN_197875	ILMN_260467	GM833	NM_001033414.2	NM_001033414.2		330004	142353827	NM_001033414.2	Gm833	NP_001028586.1	ILMN_2529668	002340593	S	109	CGTGCTGGGAACAGGATGCTCGGCTTATTACTCCCTTATCTCCCGGCCAG	4	+	152071757-152071771:152071772-152071806	4qE2	Mus musculus gene model 833, (NCBI) (Gm833), mRNA.					
Mus musculus	RefSeq	ILMN_197026	ILMN_197026	LOC226526	XM_136306.3	XM_136306.3			38073561	XM_136306.3	LOC226526		ILMN_1252572	005220082	S	449	ATGGAGACCTGGATGAACCCCAGCAAAAGGTCCTGCCGGAGACACTTGGG										
Mus musculus	MEEBO	ILMN_185714	ILMN_185714	ZFP386	scl42709.4_0				9625007	NM_019565	Zfp386		ILMN_2429383	002070273	S	3	TTACTATCCAGCAGTGTAACTATATTCAAGATAATCATTACAAGAGTATA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214620	ILMN_214620	DBNDD1	NM_028146.2	NM_028146.2		72185	142348942	NM_028146.2	Dbndd1	NP_082422.1	ILMN_1227672	004220068	S	1182	GGCTGAAAAGCTACCCCAGGTCTTCTTTAGTTCAGAACATCCAACCTCAG	8	-	126029921-126029970	8qE2	Mus musculus dysbindin (dystrobrevin binding protein 1) domain containing 1 (Dbndd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D8Ertd590e; 2810427I04Rik	D8Ertd590e; 2810427I04Rik
Mus musculus	RefSeq	ILMN_223996	ILMN_247103	SCN10A	NM_009134.2	NM_009134.2		20264	131889983	NM_009134.2	Scn10a	NP_033160.2	ILMN_1242354	004760044	S	5807	CACCAGGGGCCTGAGTGACAGGGCCAACATTAGCACATCTAGCTCAATGC	9	-	119518095-119518144	9qF4	Mus musculus sodium channel, voltage-gated, type X, alpha (Scn10a), mRNA.	A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence IEA]	PN3; Nav1.8; SNS	PN3; Nav1.8; SNS
Mus musculus	RefSeq	ILMN_197997	ILMN_256456	GM312	XM_001004196.1	XM_001004196.1		239932	94400664	XM_001004196.1	Gm312	XP_001004196.1	ILMN_2530118	005050730	S	133	CTCTCGGACTCCATGTCTCTTCGGGGCTATCCTAGGCTTTGCAGTGCTAC				16qC3.3	PREDICTED: Mus musculus gene model 312, (NCBI) (Gm312), mRNA.					
Mus musculus	RefSeq	ILMN_222023	ILMN_222023	CORO1B	NM_011778.2	NM_011778.2		23789	142388278	NM_011778.2	Coro1b	NP_035908.1	ILMN_2743569	000770398	S	1010	AGCAAAGAACCCCAGAGGGGTATGGGCAGCATGCCTAAGAGGGGCTTGGA	19	+	4151652-4151701	19qA	Mus musculus coronin, actin binding protein 1B (Coro1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_240423	ILMN_240423	NAV1	NM_173437.1	NM_173437.1		215690	28077104	NM_173437.1	Nav1	NP_775613.1	ILMN_2883016	004850731	S	8741	AGCTGTCCTCCAGGAAGTGCGTTCCCATCTAGTGAAGTGCTCTCGAAGCC	1	-	137335487-137335536	1qE4	Mus musculus neuron navigator 1 (Nav1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	POMFIL3; unc53H1; 9530089B19; C230080M11Rik; steerin-1; 9930003A20Rik; mKIAA1151	POMFIL3; unc53H1; 9530089B19; C230080M11Rik; steerin-1; 9930003A20Rik; mKIAA1151
Mus musculus	RefSeq	ILMN_194447	ILMN_240423	NAV1	NM_173437.1	NM_173437.1		215690	28077104	NM_173437.1	Nav1	NP_775613.1	ILMN_2647873	004290544	S	8776	AGTGCTCTCGAAGCCTACACTTTCCTTCTGGAGCCTGGGACCCTGTTTAC	1	-	137335452-137335501	1qE4	Mus musculus neuron navigator 1 (Nav1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	POMFIL3; unc53H1; 9530089B19; C230080M11Rik; steerin-1; 9930003A20Rik; mKIAA1151	POMFIL3; unc53H1; 9530089B19; C230080M11Rik; steerin-1; 9930003A20Rik; mKIAA1151
Mus musculus	RefSeq	ILMN_218902	ILMN_218902	C130060K24RIK	NM_175524.3	NM_175524.3		243407	142380917	NM_175524.3	C130060K24Rik	NP_780733.1	ILMN_2701723	003400291	S	2713	GGGAGGCTGGATCATGTGTTTGGGAACGGATTGTTTAGGTCGTACTGTGA	6	+	65407995-65408044	6qC1	Mus musculus RIKEN cDNA C130060K24 gene (C130060K24Rik), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_206073	ILMN_206073	D830044I01RIK	ri|D830044I01|PX00200I03|AK052922|1302					AK052922	D830044I01Rik		ILMN_1214971	004880435	S	571	GACCCAGGACCAACTCCAGGTCACCAGCATCCAGACAAGGCAAATGTTCC										
Mus musculus	RefSeq	ILMN_185739	ILMN_243011	NR4A2	NM_013613.1	NM_013613.1		18227	7305324	NM_013613.1	Nr4a2	NP_038641.1	ILMN_1254547	003180215	S	2291	GGGGGTTTGAACCGACCCAACTACCTGTCTAAACTGTTGGGGAAGCTGCC	2	-	56960685-56960734	2qC1.1	Mus musculus nuclear receptor subfamily 4, group A, member 2 (Nr4a2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insecticide stimulus. Insecticides are chemicals used to kill insects [goid 17085] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inorganic substance stimulus [goid 10035] [evidence ISO]; A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism [goid 16265] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42416] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]; Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment [goid 43576] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence ISO]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [evidence ISO]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [evidence IDA]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	NOT; RNR-1; Nurr1; TINOR; TINUR; HZF-3	NOT; RNR-1; Nurr1; TINOR; TINUR; HZF-3
Mus musculus	MEEBO	ILMN_215242	ILMN_215242	4930435H24RIK	scl073975.2_41				51710985	XM_485603	4930435H24Rik		ILMN_1259208	003940110	S	753	CCTTGTCTTCTCAGATACCGGCAAAGTCTCTAATAAATTGCCAGAATTTC										
Mus musculus	RefSeq	ILMN_200310	ILMN_200310	LOC386196	XM_359114.1	XM_359114.1			38081278	XM_359114.1	LOC386196		ILMN_1214337	006130470	S	665	AAAGAGGAACACTCCTCCACTGCTGGTTAGAGGGTGCGCCAGAGAACCGG										
Mus musculus	Riken	ILMN_206128	ILMN_206128	C630023P03RIK	ri|C630023P03|PX00084G13|AK083177|1786					AK083177	C630023P03Rik		ILMN_1257233	000630382	S	960	GAGCCCTGTGGCAGAGAAGACCCAGAACCCCATTAACCCCAAAACAGAGC										
Mus musculus	RefSeq	ILMN_198803	ILMN_311231	EG625530	XM_001476444.1	XM_001476444.1		625530	149257926	XM_001476444.1	EG625530	XP_001476494.1	ILMN_1218803	004760465	S	1327	GCACAGATGATGCCGGAGAGGCATGCGAAAACAGGGAGAAGAGAGCAAAG				7qE3	PREDICTED: Mus musculus predicted gene, EG625530, transcript variant 1 (EG625530), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184385	ILMN_184385	TMEM9	NM_025439.2	NM_025439.2		66241	31981292	NM_025439.2	Tmem9	NP_079715.1	ILMN_1235494	000160026	S	946	CAAGAGCTCAGTGGGTGCGAGGAAAGTATGATCCAGCGCTCAGCCTTCGC	1	+	137931118-137931167	1qE4	Mus musculus transmembrane protein 9 (Tmem9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1500015G18Rik; AW545782	1500015G18Rik; AW545782
Mus musculus	RefSeq	ILMN_230450	ILMN_230450	CAPN13	NM_001033444.2	NM_001033444.2		381122	141802275	NM_001033444.2	Capn13	NP_001028616.1	ILMN_3160190	003610148	S	2468	AACCAGTCTGATCCAGTTTATGCACCCCCCAGGTGGTGTTGCTGACCCAG	17	-	73655900-73655949	17qE2	Mus musculus calpain 13 (Capn13), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Gm943	Gm943
Mus musculus	RefSeq	ILMN_231171	ILMN_231171	ESRRG	NM_011935.2	NM_011935.2		26381	52345417	NM_011935.2	Esrrg	NP_036065.1	ILMN_2973156	000450603	S	4846	GCATCTCTGTTTACCTGCCTGGGACAACATTTTATGGCAGTCTTATGTGC	1	+	190038349-190038398	1qH6	Mus musculus estrogen-related receptor gamma (Esrrg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with the AF-2 domain of a protein, a highly conserved ligand-dependent transactivation domain which is essential for receptor-mediated transcriptional activation [goid 50682] [evidence IPI]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	Errg; mKIAA0832; ERR3; NR3B3	Errg; mKIAA0832; ERR3; NR3B3
Mus musculus	RefSeq	ILMN_192259	ILMN_231171	ESRRG	NM_011935.2	NM_011935.2		26381	52345417	NM_011935.2	Esrrg	NP_036065.1	ILMN_1245243	002000767	S	1529	CTGGGCCCTCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATG	1	+	190035032-190035081	1qH6	Mus musculus estrogen-related receptor gamma (Esrrg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with the AF-2 domain of a protein, a highly conserved ligand-dependent transactivation domain which is essential for receptor-mediated transcriptional activation [goid 50682] [evidence IPI]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	Errg; mKIAA0832; ERR3; NR3B3	Errg; mKIAA0832; ERR3; NR3B3
Mus musculus	RefSeq	ILMN_192259	ILMN_231171	ESRRG	NM_011935.2	NM_011935.2		26381	52345417	NM_011935.2	Esrrg	NP_036065.1	ILMN_2695098	001710349	S	4560	CCAGCAAGACCGTTTAGTTAATGCCAGCTGTCAGGAAGATACCAAGGTGT	1	+	190038063-190038112	1qH6	Mus musculus estrogen-related receptor gamma (Esrrg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with the AF-2 domain of a protein, a highly conserved ligand-dependent transactivation domain which is essential for receptor-mediated transcriptional activation [goid 50682] [evidence IPI]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	Errg; mKIAA0832; ERR3; NR3B3	Errg; mKIAA0832; ERR3; NR3B3
Mus musculus	RefSeq	ILMN_211395	ILMN_211395	GNG13	NM_022422.4	NM_022422.4		64337	141801840	NM_022422.4	Gng13	NP_071867.1	ILMN_2615412	002650743	S	277	GTGCACCATCCTATGAGCCTGACCCACACTCTCTGTAAGGTGTGACTTTA	17	+	25855962-25855977:25855978-25856011	17qA3.3	Mus musculus guanine nucleotide binding protein 13, gamma (Gng13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IPI]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IDA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IPI]	1500031D04Rik; Ggamma13; AB030194	1500031D04Rik; Ggamma13; AB030194
Mus musculus	RefSeq	ILMN_219807	ILMN_219807	9130017N09RIK	NM_030218.1	NM_030218.1		78906	21313525	NM_030218.1	9130017N09Rik	NP_084494.1	ILMN_3002571	006350670	S	2204	TGGTTTTCCCTGGGGTGGGCGAGTGATTCGTGCTTAGGGGTGGTTCTCAG	10	+	79233358-79233407	10qC1	Mus musculus RIKEN cDNA 9130017N09 gene (9130017N09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212890	ILMN_212890	GIF	NM_008118.3	NM_008118.3		14603	142377019	NM_008118.3	Gif	NP_032144.2	ILMN_2631363	003850136	S	1313	CACATCACAGCCAACTTCACCCAATACTGAGACGGAGTATCTTCTGTCCC	19	+	11837718-11837747:11837748-11837767	19qA	Mus musculus gastric intrinsic factor (Gif), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [evidence IEA]; The directed movement of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom, into, out of or within a cell [goid 15889] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Interacting selectively with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 31419] [evidence IEA]; Catalysis of the transfer of cobalt (Co) ions from one side of a membrane to the other [goid 15087] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AV073125; MGC144768	AV073125; MGC144768
Mus musculus	RefSeq	ILMN_214825	ILMN_240680	1700018L24RIK	NM_029326.1	NM_029326.1		75528	58037418	NM_029326.1	1700018L24Rik	NP_083602.1	ILMN_1218396	005550386	S	703	CCCAGGCAGCACCTTGAATGTGTGCAACAGAGAGACCATCTGTGATAAAA	8	+	11855689-11855705:11855706-11855738	8qA1.1	Mus musculus RIKEN cDNA 1700018L24 gene (1700018L24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_191395	ILMN_318280	LOC100046843	XM_001475901.1	XM_001475901.1		100046843	149264562	XM_001475901.1	LOC100046843	XP_001475951.1	ILMN_1235712	002190114	S	548	CTTAGGCTTCCCGCAGACCTGAAGAACCGGCTTAGAACCGTTTGCCTCCC					PREDICTED: Mus musculus similar to mutS homolog 3 (LOC100046843), mRNA.					
Mus musculus	RefSeq	ILMN_195472	ILMN_318280	LOC100046843	XM_001475901.1	XM_001475901.1		100046843	149264562	XM_001475901.1	LOC100046843	XP_001475951.1	ILMN_2515871	000510647	S	3963	GGGGCAGTGCCTATTTAGGTTCAGACAATTGACAACAGGCTAATCTGACA					PREDICTED: Mus musculus similar to mutS homolog 3 (LOC100046843), mRNA.					
Mus musculus	MEEBO	ILMN_221549	ILMN_221549	CDH11	scl000659.1_40	NM_009866.2			21918883	NM_009866.2	Cdh11		ILMN_2737073	006760543	S	37	CAATCAGATGGGTGGAGCATGTTATAGGAATTGGCAGCAGGTATCCAATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214457	ILMN_214457	KLF10	NM_013692.2	NM_013692.2		21847	118130846	NM_013692.2	Klf10	NP_038720.1	ILMN_2648189	003120750	S	2984	TTGCACAATATTTTTTGTTGAACTTTATACCTTGTTTACAATAAAGACTT	15	-	38224179-38224228	15qB3.1	Mus musculus Kruppel-like factor 10 (Klf10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Gdnfif; mGIF; Tieg1; Tieg; EGR[a]; Egral; AI115143	Gdnfif; mGIF; Tieg1; Tieg; EGR[a]; Egral; AI115143
Mus musculus	MEEBO	ILMN_216999	ILMN_216999	9230106D20RIK	scl39111.3.1_249	NM_177792.2			31343013	NM_177792.2	9230106D20Rik		ILMN_1244082	004570619	S	1262	CAACTCAGCCATCCCCACTTGAGACTCTCTGCCTACGACCCTTTGGTGAG										
Mus musculus	RefSeq	ILMN_221019	ILMN_221019	RPL29	NM_009082.2	NM_009082.2		19944	31982039	NM_009082.2	Rpl29	NP_033108.1	ILMN_2857570	003060687	S	573	CCCCTGTGAAGGCCCCATAGAAAAGGCTCCTGCCAGTGTGAAGACAGACG	9	+	106333761-106333780:106333781-106333810	9qF1	Mus musculus ribosomal protein L29 (Rpl29), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence IDA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence IDA]; A ribosome bound to mRNA that forms part of a polysome [goid 42788] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IMP]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	MGC107575; MGC107574; MGC107576; Rpl43	MGC107575; MGC107574; MGC107576; Rpl43
Mus musculus	RefSeq	ILMN_221019	ILMN_221019	RPL29	NM_009082.2	NM_009082.2		19944	31982039	NM_009082.2	Rpl29	NP_033108.1	ILMN_2730005	001580021	S	31	GGGTTACCGTGAGTGTTGGCCTTACGGCATCCGATGACATCCGTGACTAC	9	+	106331900-106331949	9qF1	Mus musculus ribosomal protein L29 (Rpl29), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence IDA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence IDA]; A ribosome bound to mRNA that forms part of a polysome [goid 42788] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IMP]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	MGC107575; MGC107574; MGC107576; Rpl43	MGC107575; MGC107574; MGC107576; Rpl43
Mus musculus	RefSeq	ILMN_217099	ILMN_217099	NOLA2	NM_026631.3	NM_026631.3		52530	146141172	NM_026631.3	Nola2	NP_080907.1	ILMN_2679077	001450706	S	37	GTTGCTAAGATGACCAAAGTAAAGGCCGCTCCCGAAGAGTCCGAGGCGCA				11qB1.3	Mus musculus nucleolar protein family A, member 2 (Nola2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Nhp2; D11Ertd175e; 2410130M07Rik	Nhp2; D11Ertd175e; 2410130M07Rik
Mus musculus	RefSeq	ILMN_210344	ILMN_210344	B230317C12RIK	NM_019833.2	NM_019833.2		56279	142364267	NM_019833.2	B230317C12Rik	NP_062807.1	ILMN_2604676	001780088	S	976	GCCCTGGCGTGCAAAGATCGCCATTGGTCTGCTGGAATTTGTGGAGGAGC	2	+	26491380-26491429	2qA3	Mus musculus RIKEN cDNA B230317C12 gene (B230317C12Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW209000; RP23-125H15.2; AB030186; PIP49	AW209000; RP23-125H15.2; AB030186; PIP49
Mus musculus	RefSeq	ILMN_197828	ILMN_311662	LOC666168	XM_001475399.1	XM_001475399.1		666168	149252865	XM_001475399.1	LOC666168	XP_001475449.1	ILMN_2529509	000450731	S	892	AAGGACCTTCGTGCTGAGGTGGACACATTCATGATCGAGGGCCATGACAC	4	+	115243590-115243639	4qD1	PREDICTED: Mus musculus similar to cytochrome P450, family 4, subfamily a, polypeptide 10 (LOC666168), mRNA.					
Mus musculus	RefSeq	ILMN_209406	ILMN_209406	ADPRHL1	NM_172750.1	NM_172750.1		234072	27370109	NM_172750.1	Adprhl1	NP_766338.1	ILMN_2786973	003120093	S	950	GTCATGATGCCCCCATGATAGCCTACGATGCCCTTCTTGCTTCGGGGAGC	8	-	13242267-13242316	8qA1.1	Mus musculus ADP-ribosylhydrolase like 1 (Adprhl1), mRNA.		The process of removing one or more ADP-ribose residues from a protein [goid 51725] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: N2-(ADP-D-ribosyl)-L-arginine + H2O = L-arginine + ADP-ribose [goid 3875] [evidence IEA]	D330008N11Rik; Arh2	D330008N11Rik; Arh2
Mus musculus	MEEBO	ILMN_213420	ILMN_213420	4930557F10RIK	scl44222.2.1_86	XM_358438.1			38074334	XM_358438.1	4930557F10Rik		ILMN_1251045	000460762	S	659	TGCCTGAAGAATTACATGGTTGACAATAAAAAGCACATTCAAACACCTTC										
Mus musculus	RefSeq	ILMN_223869	ILMN_224749	3110040M04RIK	XM_993996.1	XM_993996.1		73176	94364013	XM_993996.1	3110040M04Rik	XP_999090.1	ILMN_1219011	001240707	S	1603	CCGTCTTGGTCACATCCTGACTTGTAATGCTTCATCGTGGTTTTCAGTAT	1	+	153052851-153052900	1qG1	PREDICTED: Mus musculus RIKEN cDNA 3110040M04 gene (3110040M04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214453	ILMN_317056	LOC100045362	XM_001474139.1	XM_001474139.1		100045362	149265937	XM_001474139.1	LOC100045362	XP_001474189.1	ILMN_2721475	005690020	S	594	CTGTGTCCCAGCTCCTATTACCAAATTAATGCTTTATGTCCAAAATTCCC					PREDICTED: Mus musculus similar to olfactory receptor Olfr747 (LOC100045362), mRNA.					
Mus musculus	RefSeq	ILMN_186533	ILMN_243647	USP15	NM_027604.3	NM_027604.3		14479	118130398	NM_027604.3	Usp15	NP_081880.2	ILMN_1244851	005860377	S	695	CCCAGGTGCATCCAATTTTTCAACTTTACCAAAGATCTCTCCTTCATCTC	10	-	122590130-122590179	10qD2	Mus musculus ubiquitin specific peptidase 15 (Usp15), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]	AI327321; mKIAA0529; 4921514G19Rik; E430033I05Rik; Gcap18	AI327321; mKIAA0529; 4921514G19Rik; E430033I05Rik; Gcap18
Mus musculus	RefSeq	ILMN_223690	ILMN_223690	LHFPL4	NM_177763.3	NM_177763.3		269788	144922608	NM_177763.3	Lhfpl4	NP_808431.2	ILMN_2767718	002600148	S	3046	GAAGTCAGATCCTCAGCTTCAAACCAGAGGGGAGGGTCCAGGTAGTGGCG	6	-	113119750-113119799	6qE3	Mus musculus lipoma HMGIC fusion partner-like protein 4 (Lhfpl4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA4027; AI604880; KIAA4027; B230384L07; 1190004M23Rik; MGC65621	mKIAA4027; AI604880; KIAA4027; B230384L07; 1190004M23Rik; MGC65621
Mus musculus	MEEBO	ILMN_191108	ILMN_191108	ATRN	scl20271.27_70				6753145	NM_009730	Atrn		ILMN_2678485	001470377	S	4155	AACAAAGCCGCAGTCCTCTCTGTATTCGTGAGGCTCCCTCGAGGACTGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IPI]		
Mus musculus	MEEBO	ILMN_215011	ILMN_215011	CBX5	scl0012419.1_134	NM_007626.2			31542347	NM_007626.2	Cbx5		ILMN_1228337	001470497	S	8557	GAAAACAATATTGATGTATGCTAAAGTGGTAGAAACGCGAACAGCACCAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure [goid 10369] [evidence IDA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216065	ILMN_216065	GULP1	NM_027506.2	NM_027506.2		70676	118130377	NM_027506.2	Gulp1	NP_081782.1	ILMN_1244925	005670746	S	1128	CCAACACTCTCTCCTTTGTTGCTATGAAGGCTTGCTTAAAGCAGTTAGAC	1	+	44845448-44845474:44845475-44845497	1qC1.1	Mus musculus GULP, engulfment adaptor PTB domain containing 1 (Gulp1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	3110030A04Rik; CED-6; Gulp-2; GULP; Ced6; 5730529O06Rik	3110030A04Rik; CED-6; Gulp-2; GULP; Ced6; 5730529O06Rik
Mus musculus	Riken	ILMN_205658	ILMN_205658	EVC	ri|A730065C21|PX00152A18|AK043184|3886					AK043184	Evc		ILMN_1235503	000270364	S	3554	AGGAATCCTTGTCAAGAAATGGTCCCAGCTGTCAGCCCCCTATCCCTTTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_202048	ILMN_222930	6330407J23RIK	NM_026138.2	NM_026138.2		67412	120953218	NM_026138.2	6330407J23Rik	NP_080414.2	ILMN_1233535	006380333	S	3227	GACCGAGGAGCAGAGGAGCCCATATCCGTGAGTCAGATGTTCCAGCCCAT	10	+	28917211-28917246:28918751-28918764	10qA4	Mus musculus RIKEN cDNA 6330407J23 gene (6330407J23Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222930	ILMN_222930	6330407J23RIK	NM_026138.2	NM_026138.2		67412	120953218	NM_026138.2	6330407J23Rik	NP_080414.2	ILMN_1218026	001450408	S	3576	CCCCAGCGACCAAAGTGTTTCAGGTAAGGAAAAGTGAGTTATCAGAGTTC	10	+	28919064-28919113	10qA4	Mus musculus RIKEN cDNA 6330407J23 gene (6330407J23Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_208933	ILMN_208933	BC030867	NM_153544.3	NM_153544.3		217216	110347504	NM_153544.3	BC030867	NP_705772.3	ILMN_1231587	001980431	S	1795	GACACCCAACAACCTAGTCCACATTTACAGTCTAGATTCTGGAGATGGGG	11	+	102121849-102121898	11qD	Mus musculus cDNA sequence BC030867 (BC030867), mRNA.				MGC117894; RP23-461C4.3; MGC31269	MGC117894; RP23-461C4.3; MGC31269
Mus musculus	RefSeq	ILMN_199048	ILMN_199048	LOC216105	XM_137164.2	XM_137164.2			38090602	XM_137164.2	LOC216105		ILMN_2533861	003400327	S	104	TCCGGTCCCAGGGATTTGACTGCAAGTTCCTAAGGAACATGTGCTTTGCC										
Mus musculus	RefSeq	ILMN_215063	ILMN_215063	PTPRE	NM_011212.2	NM_011212.2		19267	31543530	NM_011212.2	Ptpre	NP_035342.2	ILMN_2826916	005890129	S	5113	AACCTTTTTAAATGAGCCTGATACCTGTGTTTCAGCATTTGGCCACGTTG	7	+	142877679-142877728	7qF3	Mus musculus protein tyrosine phosphatase, receptor type, E (Ptpre), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	PTPe; PTPepsilon	PTPe; PTPepsilon
Mus musculus	RefSeq	ILMN_256628	ILMN_256628	OLFR1206	NM_001001810.2	NM_001001810.2		258896	116174761	NM_001001810.2	Olfr1206	NP_001001810.2	ILMN_3038134	002630279	I	9	CAACAGCACTGTCACGAAGTTTATACTACTAGGATTGACACAGGATCCCC	2	+	88704772-88704821	2qE1	Mus musculus olfactory receptor 1206 (Olfr1206), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr1206-ps1; MOR230-3	Olfr1206-ps1; MOR230-3
Mus musculus	RefSeq	ILMN_256628	ILMN_256628	OLFR1206	NM_001001810.2	NM_001001810.2		258896	116174761	NM_001001810.2	Olfr1206	NP_001001810.2	ILMN_3112466	006330487	A	464	CTGCTCAGATTGTTTTGGCATTGAGACTGCCCTTCTGTGGGCCCAATTTG	2	+	88705227-88705276	2qE1	Mus musculus olfactory receptor 1206 (Olfr1206), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr1206-ps1; MOR230-3	Olfr1206-ps1; MOR230-3
Mus musculus	RefSeq	ILMN_214313	ILMN_214313	LCE1I	NM_029667.2	NM_029667.2		76585	142351738	NM_029667.2	Lce1i	NP_083943.1	ILMN_1220831	005570397	S	551	AGTGCAGGAGGAGCACATGCTCAGAAGATTCTCCATTGCCCAATGTCCTC	3	-	92581262-92581311	3qF1	Mus musculus late cornified envelope 1I (Lce1i), mRNA.				2310069N01Rik	2310069N01Rik
Mus musculus	RefSeq	ILMN_186128	ILMN_254457	FHL2	NM_010212.3	NM_010212.3		14200	141803241	NM_010212.3	Fhl2	NP_034342.1	ILMN_2770386	002350019	S	1143	GCGCGTGGCGCAGAGATTCGGATGTTTTCTTTCATAACCAGGCAATGCTG	1	-	43180289-43180338	1qB	Mus musculus four and a half LIM domains 2 (Fhl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SLIM3; C76204	SLIM3; C76204
Mus musculus	MEEBO	ILMN_220324	ILMN_220324	1700026L06RIK	scl19492.4.1_22	XM_130129.3			28484866	XM_130129.3	1700026L06Rik		ILMN_2720572	003460711	S	597	CCTGGACTTTATGAAAGAGTGGATTGCTCATTCTGAGAAGCTGCCTCGCA										
Mus musculus	Riken	ILMN_203218	ILMN_203218	B430109P06RIK	ri|B430109P06|PX00070F01|AK046584|1927					AK046584	B430109P06Rik		ILMN_1225620	002470280	S	1740	GGATGAATGGCTCAGAGCACTTGCTGCTTTTGCAGAGGTCCTGGGTTTCC										
Mus musculus	Riken	ILMN_204571	ILMN_204571	C130032N06RIK	ri|C130032N06|PX00168B13|AK048066|604					AK048066	C130032N06Rik		ILMN_2566014	005390300	S	466	TCCAGCCGGCTCGTTGAGCCTGATACTGGGGAACTGGTTTGTCTCTGATA										
Mus musculus	RefSeq	ILMN_245627	ILMN_245627	TFPI	NM_011576.1	NM_011576.1		21788	33859643	NM_011576.1	Tfpi	NP_035706.1	ILMN_2819650	000240731	S	1066	ATTCAGCCACTGGGAAATGCCACCGATTTAACTACACTGGATGTGGGGGA	2	-	84274450-84274499	2qD	Mus musculus tissue factor pathway inhibitor (Tfpi), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	LACI; EPI; AW552122; A630013F22Rik	LACI; EPI; AW552122; A630013F22Rik
Mus musculus	RefSeq	ILMN_190220	ILMN_190220	ZFA	NM_009540.3	NM_009540.3		22639	113930732	NM_009540.3	Zfa	NP_033566.3	ILMN_1219120	001230192	S	3029	TTAACTTGCTTACCTTGATGGACCAGCTAACTCATGGTAACTCTGCATTG	10	-	52262467-52262516	10qB3	Mus musculus zinc finger protein, autosomal (Zfa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfx	Zfx
Mus musculus	Riken	ILMN_206705	ILMN_206705	RPGRIP1	ri|D930025N02|PX00318E16|AK086397|1828					AK086397	Rpgrip1		ILMN_1234594	000360458	S	1446	CCACCTTTGTCTCCCAGTGTGAGGATTGGGGTTAAAGTCATGTGCCACTG						A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204657	ILMN_204657	9330181H08RIK	ri|9330181H08|PX00106L15|AK034350|2307					AK034350	9330181H08Rik		ILMN_1252575	007050377	S	2195	ATGAGGCCATGCATCCATTGAGCTCCGGGACTTCTGACATGCCTTTGTGC										
Mus musculus	MEEBO	ILMN_191347	ILMN_191347	5730557L09RIK	scl14371.1.1_274						5730557L09Rik		ILMN_2478331	000160092	S	20	ACAATAGAAGGAGGTGGTTCACCTTTTGGATTGTAAATATATGAAAGTGT										
Mus musculus	RefSeq	ILMN_211064	ILMN_211064	AGXT	NM_016702.2	NM_016702.2		11611	111038129	NM_016702.2	Agxt	NP_057911.2	ILMN_2612117	006180408	S	1231	GCCCTGCAGCATTGTCCTAAGAACAAGTTGTGAGCATCCTCTCACCAGAC	1	+	95041712-95041744:95041745-95041761	1qD	Mus musculus alanine-glyoxylate aminotransferase (Agxt), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glyoxylate, the anion of glyoxylic acid, HOC-COOH [goid 46487] [evidence IMP]; The regulated release of oxalic acid, ethanedioic acid, by a cell or group of cells [goid 46724] [evidence IMP]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-serine + pyruvate = 3-hydroxypyruvate + L-alanine [goid 4760] [evidence IEA]; Catalysis of the reaction: L-alanine + glyoxylate = pyruvate + glycine [goid 8453] [evidence IMP]	Agxt1; Agt1	Agxt1; Agt1
Mus musculus	MEEBO	ILMN_216871	ILMN_216871	BC048355	scl0381101.1_0				46391082	NM_207161	BC048355		ILMN_2676294	002630379	S	90	GTATTCGCGGATCGTATCCCGGCTGCGGCGCTATGGGAAGGTGCTCACTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	MEEBO	ILMN_211169	ILMN_211169	OTOP3	scl40734.7.1_147	XM_126510.2			28514760	XM_126510.2	Otop3		ILMN_2613238	000110736	S	2156	TGGCGTCTGGGGGCTGGAAGAGGTTGAGTCCTTCTGTGGGACATCCTAGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]				
Mus musculus	RefSeq	ILMN_201263	ILMN_325390	LOC100044948	XM_001473652.1	XM_001473652.1		100044948	149259477	XM_001473652.1	LOC100044948	XP_001473702.1	ILMN_1244853	000110400	S	62	TCGCCACCATGCCTATGTCCATCGTGAACACCAATGTTCCCCACGCCTCC					PREDICTED: Mus musculus similar to macrophage migration inhibitory factor (LOC100044948), mRNA.					
Mus musculus	RefSeq	ILMN_208726	ILMN_208726	LRIT2	NM_173418.3	NM_173418.3		239038	146198743	NM_173418.3	Lrit2	NP_775594.1	ILMN_2588946	007650725	S	2203	GGTGGCAACACTCATATTGAAATTAATCACCCTTCATTACTTTGGGTTCT				14qB	Mus musculus leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 (Lrit2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Lrrc22; A930010E21Rik	Lrrc22; A930010E21Rik
Mus musculus	RefSeq	ILMN_223530	ILMN_223530	SLC39A4	NM_028064.2	NM_028064.2		72027	27754010	NM_028064.2	Slc39a4	NP_082340.1	ILMN_1215938	005890041	S	211	CCTGGAACTGGACGGCCTGTTAAATACGCTGGTGGCCCGTGTGCACTGCA	15	-	76447022-76447071	15qD3	Mus musculus solute carrier family 39 (zinc transporter), member 4 (Slc39a4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IDA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	1600025H15Rik; ZIP4; AWMS2; AU041686	1600025H15Rik; ZIP4; AWMS2; AU041686
Mus musculus	RefSeq	ILMN_223530	ILMN_223530	SLC39A4	NM_028064.2	NM_028064.2		72027	27754010	NM_028064.2	Slc39a4	NP_082340.1	ILMN_1226293	002470086	S	2050	GTACGAAGACAACATCACCTTCTGACAGCTCTATCCCATCCCAGTCCTTG	15	-	76442939-76442964:76442965-76442988	15qD3	Mus musculus solute carrier family 39 (zinc transporter), member 4 (Slc39a4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IDA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	1600025H15Rik; ZIP4; AWMS2; AU041686	1600025H15Rik; ZIP4; AWMS2; AU041686
Mus musculus	RefSeq	ILMN_209328	ILMN_209328	PEX6	NM_145488.1	NM_145488.1		224824	21703961	NM_145488.1	Pex6	NP_663463.1	ILMN_1247278	002000487	S	1113	GTGTGTCAACAGCTGGGCAAGTTGAGATCCTGGAAGGAAGCCTGGAGAGA	17	+	46851436-46851485	17qC	Mus musculus peroxisomal biogenesis factor 6 (Pex6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA4177; D130055I09Rik; KIAA4177; AI132582; MGC6455	mKIAA4177; D130055I09Rik; KIAA4177; AI132582; MGC6455
Mus musculus	RefSeq	ILMN_209328	ILMN_209328	PEX6	NM_145488.1	NM_145488.1		224824	21703961	NM_145488.1	Pex6	NP_663463.1	ILMN_2944576	004180598	S	2727	TGAGCCTGGCAAACGTGCTGGATTGCTGCCCACCCCAGCTGACTGGTGCA	17	+	46861794-46861843	17qC	Mus musculus peroxisomal biogenesis factor 6 (Pex6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA4177; D130055I09Rik; KIAA4177; AI132582; MGC6455	mKIAA4177; D130055I09Rik; KIAA4177; AI132582; MGC6455
Mus musculus	RefSeq	ILMN_209328	ILMN_209328	PEX6	NM_145488.1	NM_145488.1		224824	21703961	NM_145488.1	Pex6	NP_663463.1	ILMN_2716085	002340537	S	3129	GGGCTTGGCAGCCTGTGACCTGTGCGGAGACACTAGTTCTGGAGTAGAAA	17	+	46862419-46862468	17qC	Mus musculus peroxisomal biogenesis factor 6 (Pex6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA4177; D130055I09Rik; KIAA4177; AI132582; MGC6455	mKIAA4177; D130055I09Rik; KIAA4177; AI132582; MGC6455
Mus musculus	RefSeq	ILMN_215451	ILMN_257967	THADA	XM_619495.4	XM_619495.4		240174	149268929	XM_619495.4	Thada	XP_619495.3	ILMN_1232235	006290435	S	6224	CAGTTCTATCCCAAAGCCAGCGCCCATTTCCCCATACACTGACTGCATTG	17	-	84590995-84591044	17qE4	PREDICTED: Mus musculus thyroid adenoma associated (Thada), mRNA.					
Mus musculus	RefSeq	ILMN_214753	ILMN_257967	THADA	XM_619495.4	XM_619495.4		240174	149268929	XM_619495.4	Thada	XP_619495.3	ILMN_2651565	004860240	S	2889	CCAATGTATGGGAGAGTCCACTGTATAACAAGAGCTTTTCAGAGGTTGCC	17	-	84828414-84828463	17qE4	PREDICTED: Mus musculus thyroid adenoma associated (Thada), mRNA.					
Mus musculus	RefSeq	ILMN_215451	ILMN_257967	THADA	XM_619495.4	XM_619495.4		240174	149268929	XM_619495.4	Thada	XP_619495.3	ILMN_1223501	006220739	S	3992	CTCTCGTTTCCCAGAACTGTACCCATTTCTTCTCAAACAGTTGGAAACTG	17	-	84736151-84736200	17qE4	PREDICTED: Mus musculus thyroid adenoma associated (Thada), mRNA.					
Mus musculus	RefSeq	ILMN_222470	ILMN_222470	GJD3	NM_178596.2	NM_178596.2		353155	116174743	NM_178596.2	Gjd3	NP_848711.2	ILMN_2750021	005910500	S	577	TTCTACTTCGCCGTCGGGCTGCTGTCGGCGCTGCTCAGCGTGGCGGAGCT	11	-	98843704-98843753	11qD	Mus musculus gap junction protein, delta 3 (Gjd3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISS]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Assembly of gap junctions, which are found in most animal tissues, and serve as direct connections between the cytoplasms of adjacent cells. They provide open channels through the plasma membrane, allowing ions and small molecules (less than approximately a thousand daltons) to diffuse freely between neighboring cells, but preventing the passage of proteins and nucleic acids [goid 16264] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	cx30.2; Gja11	cx30.2; Gja11
Mus musculus	RefSeq	ILMN_231567	ILMN_231567	L3MBTL3	NM_172787.1	NM_172787.1		237339	27370169	NM_172787.1	L3mbtl3	NP_766375.1	ILMN_2815479	006900088	S	3174	AACCTGGCTGGGTTAAGCCTCGGACTGGTGTCAGTCATGTTCGCCCTGTG	10	-	25965055-25965104	10qA4	Mus musculus l(3)mbt-like 3 (Drosophila) (L3mbtl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]		MBT-1; AI481284; MGC90546	MBT-1; AI481284; MGC90546
Mus musculus	RefSeq	ILMN_214839	ILMN_214839	ATG2B	NM_029654.4	NM_029654.4		76559	118197273	NM_029654.4	Atg2b	NP_083930.5	ILMN_2652518	002900768	S	7390	GTTAAGGACTTAGTGCAGCCCGTTAGTGTCAAGGGCATTGGAAGTGGGCT	12	-	106854482-106854531	12qE	Mus musculus ATG2 autophagy related 2 homolog B (S. cerevisiae) (Atg2b), mRNA.				C630028L02Rik; AI503411; AI047755; AW558123; mKIAA4067; KIAA4067; 2410024A21Rik; C030004M05Rik	C630028L02Rik; AI503411; AI047755; AW558123; mKIAA4067; KIAA4067; 2410024A21Rik; C030004M05Rik
Mus musculus	RefSeq	ILMN_210380	ILMN_214839	ATG2B	NM_029654.4	NM_029654.4		76559	118197273	NM_029654.4	Atg2b	NP_083930.5	ILMN_2607269	002070138	S	2058	GGACCCAGCAATATTTTCGACGGGAGACTTTAAGTCTTTCCGAGCAGTCT	12	-	106899240-106899289	12qE	Mus musculus ATG2 autophagy related 2 homolog B (S. cerevisiae) (Atg2b), mRNA.				C630028L02Rik; AI503411; AI047755; AW558123; mKIAA4067; KIAA4067; 2410024A21Rik; C030004M05Rik	C630028L02Rik; AI503411; AI047755; AW558123; mKIAA4067; KIAA4067; 2410024A21Rik; C030004M05Rik
Mus musculus	RefSeq	ILMN_184174	ILMN_214839	ATG2B	NM_029654.4	NM_029654.4		76559	118197273	NM_029654.4	Atg2b	NP_083930.5	ILMN_2416470	006330019	S	9914	AGCTGCTGGGCGCACTGGGCTGCTCACTTGTTCGTGGAGTTTTTGGGTTC	12	-	106851958-106852007	12qE	Mus musculus ATG2 autophagy related 2 homolog B (S. cerevisiae) (Atg2b), mRNA.				C630028L02Rik; AI503411; AI047755; AW558123; mKIAA4067; KIAA4067; 2410024A21Rik; C030004M05Rik	C630028L02Rik; AI503411; AI047755; AW558123; mKIAA4067; KIAA4067; 2410024A21Rik; C030004M05Rik
Mus musculus	RefSeq	ILMN_188072	ILMN_246852	SCFD2	NM_178672.5	NM_178672.5		212986	146198830	NM_178672.5	Scfd2	NP_848787.2	ILMN_2735650	004060110	S	3424	AAAGGCTTTTATTGGGTGTAATATAATTTACAGTGGTTATAAAATGCTAG				5qC3.3	Mus musculus sec1 family domain containing 2 (Scfd2), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		STXBP1L1; 9330137G15; E430013M20Rik	STXBP1L1; 9330137G15; E430013M20Rik
Mus musculus	Riken	ILMN_201733	ILMN_201733	CPB1	ri|1810063F02|ZX00043K02|AK007944|507					AK007944	Cpb1		ILMN_1259010	006060010	S	380	CTGAGGCAGTCGGGGCAACGTGAGACCCAAGAAAGAGAGAGACAGAAGCG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence ISO]		
Mus musculus	Riken	ILMN_202186	ILMN_202186	1700047H18RIK	ri|1700047H18|ZX00075C09|AK006710|661					AK006710	1700047H18Rik		ILMN_2547667	005270632	S	531	TCACATCCAATGTAACTGGGGAGTCTTCAAGTATGTCCCTTACCCCTTCC										
Mus musculus	RefSeq	ILMN_238711	ILMN_238711	TMEM47	NM_138751.1	NM_138751.1		192216	20270284	NM_138751.1	Tmem47	NP_620090.1	ILMN_3124787	005310064	A	1507	TCCCCTGGGGCAATCAGAAAGAAATGTGCATGAGTTGCTTTTGTACCCTT	X	+	78340706-78340755	XqB	Mus musculus transmembrane protein 47 (Tmem47), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]			Tm4sf10; BCMP1; AI115536; 3010015F07Rik	Tm4sf10; BCMP1; AI115536; 3010015F07Rik
Mus musculus	RefSeq	ILMN_198583	ILMN_239494	GPR101	NM_001033360.2	NM_001033360.2		245424	90855768	NM_001033360.2	Gpr101	NP_001028532.1	ILMN_1258301	001690743	S	1382	GTCGTCGAAACAGCACCAGCGACCCACCTTTGCCTCCATGCTATGAGTGC	X	-	54753783-54753832	XqA6	Mus musculus G protein-coupled receptor 101 (Gpr101), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	GPCR6; Gm365	GPCR6; Gm365
Mus musculus	RefSeq	ILMN_197473	ILMN_197473	LOC219049	XM_122711.2	XM_122711.2			38076157	XM_122711.2	LOC219049		ILMN_1255728	002900524	S	479	GTTACTGGGGCTGTGCGATTGGCAAAGCCAGGTTCCAGGCTGCAAAGACA										
Mus musculus	RefSeq	ILMN_202402	ILMN_225321	TTLL5	NM_001081423.1	NM_001081423.1		320244	124487280	NM_001081423.1	Ttll5	NP_001074892.1	ILMN_1212913	006960300	S	4407	CCTTCATGCCCATCACCAACTCCACAGGATCTTTGGAAGCTCCCCAAGTT	12	+	87361527-87361553:87365170-87365192	12qD2	Mus musculus tubulin tyrosine ligase-like family, member 5 (Ttll5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	mKIAA0998; AI428864; 2310009M18Rik; D630041K24Rik; 1700048H13Rik; STAMP; R75373; 4930556H18Rik	mKIAA0998; AI428864; 2310009M18Rik; D630041K24Rik; 1700048H13Rik; STAMP; R75373; 4930556H18Rik
Mus musculus	RefSeq	ILMN_196016	ILMN_225321	TTLL5	NM_001081423.1	NM_001081423.1		320244	124487280	NM_001081423.1	Ttll5	NP_001074892.1	ILMN_1221424	004830411	S	5009	CCCAACATCAACCACCAAACTTGATCTTCCCTTTCCCGAGAGTGTGGGGG	12	+	87394545-87394594	12qD2	Mus musculus tubulin tyrosine ligase-like family, member 5 (Ttll5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	mKIAA0998; AI428864; 2310009M18Rik; D630041K24Rik; 1700048H13Rik; STAMP; R75373; 4930556H18Rik	mKIAA0998; AI428864; 2310009M18Rik; D630041K24Rik; 1700048H13Rik; STAMP; R75373; 4930556H18Rik
Mus musculus	RefSeq	ILMN_225321	ILMN_225321	TTLL5	NM_001081423.1	NM_001081423.1		320244	124487280	NM_001081423.1	Ttll5	NP_001074892.1	ILMN_3056387	002360452	I	438	GCCTCTGTGTGCTGACTGTATGACAGACCCCAAAGGAGATGCCAGTTGTG	12	+	87167463-87167512	12qD2	Mus musculus tubulin tyrosine ligase-like family, member 5 (Ttll5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	mKIAA0998; AI428864; 2310009M18Rik; D630041K24Rik; 1700048H13Rik; STAMP; R75373; 4930556H18Rik	mKIAA0998; AI428864; 2310009M18Rik; D630041K24Rik; 1700048H13Rik; STAMP; R75373; 4930556H18Rik
Mus musculus	RefSeq	ILMN_203025	ILMN_225321	TTLL5	NM_001081423.1	NM_001081423.1		320244	124487280	NM_001081423.1	Ttll5	NP_001074892.1	ILMN_1214107	004150286	S	4321	GACTGCCAAGCTTGCACAGCAAGTGTTTTTAGGGTCCTCTGCAGAAGGGC	12	+	87355780-87355809:87361471-87361490	12qD2	Mus musculus tubulin tyrosine ligase-like family, member 5 (Ttll5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	mKIAA0998; AI428864; 2310009M18Rik; D630041K24Rik; 1700048H13Rik; STAMP; R75373; 4930556H18Rik	mKIAA0998; AI428864; 2310009M18Rik; D630041K24Rik; 1700048H13Rik; STAMP; R75373; 4930556H18Rik
Mus musculus	RefSeq	ILMN_201708	ILMN_225321	TTLL5	NM_001081423.1	NM_001081423.1		320244	124487280	NM_001081423.1	Ttll5	NP_001074892.1	ILMN_1247616	005360091	S	4470	CCAAACCCTTACCCACACAGTCTGGAGCCCTTGCTACAGTTATAGGACAG	12	+	87365206-87365255	12qD2	Mus musculus tubulin tyrosine ligase-like family, member 5 (Ttll5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	mKIAA0998; AI428864; 2310009M18Rik; D630041K24Rik; 1700048H13Rik; STAMP; R75373; 4930556H18Rik	mKIAA0998; AI428864; 2310009M18Rik; D630041K24Rik; 1700048H13Rik; STAMP; R75373; 4930556H18Rik
Mus musculus	RefSeq	ILMN_185890	ILMN_310248	ENSMUSG00000074075	XM_001475386.1	XM_001475386.1		100038635	149260288	XM_001475386.1	ENSMUSG00000074075	XP_001475436.1	ILMN_1242047	007040220	S	4926	GCTCCTTCGCCTGCTTGCTGCGTGAGACTGAGTAACTGCTAGATCCTTGG				9qF2	PREDICTED: Mus musculus predicted gene, ENSMUSG00000074075 (ENSMUSG00000074075), mRNA.					
Mus musculus	MEEBO	ILMN_221288	ILMN_221288	6430605C03RIK	scl19326.1.1_135	XM_149135.1			20827254	XM_149135.1	6430605C03Rik		ILMN_2733534	003190603	S	1196	TAGTATTGAATTTTCAGAATTCTTATTATCTTGGTGTTATTTGATATCTA										
Mus musculus	RefSeq	ILMN_200579	ILMN_200579	LOC383373	XM_357017.1	XM_357017.1			38083881	XM_357017.1	LOC383373		ILMN_2539254	000870162	S	104	TTATGCCAGCTGAGTTTGGTGACCTGAGCACTGGAGGAACCCCCACCTTC										
Mus musculus	Riken	ILMN_205056	ILMN_205056	KCNMA1	ri|C230060D01|PX00176G21|AK048773|3746					AK048773	Kcnma1		ILMN_1244166	005220465	S	3599	TGAGTCGGTTAGGAAGACAATGGGGTAAGCTACGGTGGCACCATTGGGTC						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 44444] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IGI]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IMP]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction [goid 60087] [evidence IMP]; The regulation of body fluids process by which parasympathetic nerves stimulate the bladder wall muscle to contract and expel urine from the body [goid 60073] [evidence IMP]; The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body [goid 60083] [evidence IMP]; The reflex process by which a mechanical stimulus applied to the eye elicits a response of the eyelid closing [goid 60082] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The regulation of body fluids process by which parasympathetic nerves stimulate the bladder wall muscle to contract and expel urine from the body [goid 60073] [evidence IMP]; The rhythm of the locomotor activity of an organism during its 24 hour activity cycle [goid 45475] [evidence IMP]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving aldosterone [goid 32344] [evidence IMP]; Any process that decreases cell volume [goid 45794] [evidence IMP]; The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin [goid 46541] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IDA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IGI]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IMP]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IDA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IMP]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IMP]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IGI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 100 to 220 picoSiemens that opens in response to stimulus by concerted actions of internal calcium ions and membrane potential. Large conductance calcium-activated potassium channels are less sensitive to calcium than are small or intermediate conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 60072] [evidence IDA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 100 to 220 picoSiemens that opens in response to stimulus by concerted actions of internal calcium ions and membrane potential. Large conductance calcium-activated potassium channels are less sensitive to calcium than are small or intermediate conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 60072] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209748	ILMN_209748	RBBP6	NM_175023.2	NM_175023.2		19647	141801782	NM_175023.2	Rbbp6	NP_778188.1	ILMN_2598834	002940750	S	709	TGATCCTTCTTAGATGATGGAGGTTTAACACTGAGAACATGACAACATGT	7	+	130122389-130122438	7qF3	Mus musculus retinoblastoma binding protein 6 (Rbbp6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C77662; C030034J04Rik; P2P-R; PACT; AI316869; MGC32263; BB233631; 4933422O15Rik	C77662; C030034J04Rik; P2P-R; PACT; AI316869; MGC32263; BB233631; 4933422O15Rik
Mus musculus	RefSeq	ILMN_209748	ILMN_209748	RBBP6	NM_175023.2	NM_175023.2		19647	141801782	NM_175023.2	Rbbp6	NP_778188.1	ILMN_1244956	002340376	S	1345	GCAGAACACAGGGCTGTCCTAACGGGTCTGTAAATTTAATGGTTCTCTAT	7	+	130123025-130123074	7qF3	Mus musculus retinoblastoma binding protein 6 (Rbbp6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C77662; C030034J04Rik; P2P-R; PACT; AI316869; MGC32263; BB233631; 4933422O15Rik	C77662; C030034J04Rik; P2P-R; PACT; AI316869; MGC32263; BB233631; 4933422O15Rik
Mus musculus	MEEBO	ILMN_192299	ILMN_192299	SCL000710.1_2295	scl000710.1_2295	AF343877.1			15420377	AF343877.1	scl000710.1_2295		ILMN_2486818	004890044	S	3	GCCTTCTGTAGGTGGCCCAACAGTGTTCCTGTCTAACTGATACTCGTCAG										
Mus musculus	MEEBO	ILMN_187361	ILMN_187361	SLMAP	scl45797.7.9_22				38016171	NM_032008	Slmap		ILMN_2443464	004220019	S	18	GCCACACTTCAGCGGCTACTAGCCATCACCCAAGAGGCTTCAGATACTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186006	ILMN_186006	2610024E20RIK	scl51547.21_511				22122578	NM_146084	2610024E20Rik		ILMN_2431807	003170500	S	20	TTAGTTTGGGCTGAATAGAGTAGTGAAGTGGCTCGCACGCTTCCATGGGC										
Mus musculus	RefSeq	ILMN_197283	ILMN_197283	LOC380858	XM_354763.1	XM_354763.1			38074959	XM_354763.1	LOC380858		ILMN_1249399	001410364	S	563	GTGCCCTGACAGCACTGAATGGCGGAGTTACTGTGTGGGACAGGAAATGG										
Mus musculus	RefSeq	ILMN_221929	ILMN_221929	GABRB1	NM_008069.4	NM_008069.4		14400	118131022	NM_008069.4	Gabrb1	NP_032095.1	ILMN_2826167	001260592	S	809	ATGCATCTGCAGCCAGAGTCGCACTAGGAATCACTACGGTGCTGACCATG	5	+	72500049-72500075:72513188-72513210	5qC3.2	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 (Gabrb1), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]	Gabrb-1; AW061132	Gabrb-1; AW061132
Mus musculus	RefSeq	ILMN_221809	ILMN_221809	SMCR8	NM_175491.4	NM_175491.4		237782	146198630	NM_175491.4	Smcr8	NP_780700.1	ILMN_3160398	006900288	S	3144	CCCAGGCCCTGAGCATGCTAGGCAGACACGCTACTTATATTTATATGCCC				11qB2	Mus musculus Smith-Magenis syndrome chromosome region, candidate 8 homolog (human) (Smcr8), transcript variant 2, mRNA.				AI642055; 2310076G09Rik; MGC103295; D030073L15Rik	AI642055; 2310076G09Rik; MGC103295; D030073L15Rik
Mus musculus	RefSeq	ILMN_217295	ILMN_257187	NPAL3	NM_028995.3	NM_028995.3		74552	142364504	NM_028995.3	Npal3	NP_083271.1	ILMN_2681583	003420601	S	1799	CCTCCTTGGACAGTCAGTGAGCGTCAGGTAACGGTCACAGGTTCCACACA	4	-	135007992-135008041	4qD3	Mus musculus NIPA-like domain containing 3 (Npal3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI480660; 9130020G22Rik; RP23-332E2.5	AI480660; 9130020G22Rik; RP23-332E2.5
Mus musculus	RefSeq	ILMN_211314	ILMN_211314	APOL7C	NM_175391.4	NM_175391.4		108956	149363692	NM_175391.4	Apol7c	NP_780600.1	ILMN_2614563	000540093	S	1709	GTCAGACTTTGGTTGTGAAAATCATTTCCTGTTCTTGGTTTTGGGTAGTC				15qE1	Mus musculus apolipoprotein L 7c (Apol7c), mRNA.					
Mus musculus	RefSeq	ILMN_220242	ILMN_220242	D230039L06RIK	NM_177724.3	NM_177724.3		240945	141803292	NM_177724.3	D230039L06Rik	NP_808392.1	ILMN_2719589	006550377	S	1966	TGAAGTCCTGTGGCTGCTGATCCCATACTTACCTGCTCATGAATCTGCCC	1	+	180646462-180646511	1qH4	Mus musculus RIKEN cDNA D230039L06 gene (D230039L06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196815	ILMN_196815	LOC237459	XM_137290.1	XM_137290.1			20865555	XM_137290.1	LOC237459		ILMN_1256708	002190402	S	1317	GGACCCGGGTTTTCGAAACTCTTCTTATCCAGAGACAGGTGTGTTTGTCA										
Mus musculus	RefSeq	ILMN_242411	ILMN_242411	CD40	NM_170702.2	NM_170702.2		21939	70608176	NM_170702.2	Cd40	NP_733803.2	ILMN_3115796	004760241	A	1408	GAGGGTTGTCATTTGACCTCCATGTGTGCTCTGTGGTAATGTACCCCGTG	2	+	164896966-164897015	2qH3	Mus musculus CD40 antigen (Cd40), transcript variant 5, mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IGI]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell capable of activating, perpetuating, or inhibiting an immune response [goid 2768] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]	TRAP; IMD3; AI326936; IGM; HIGM1; p50; Tnfrsf5; Bp50; T-BAM; GP39	TRAP; IMD3; AI326936; IGM; HIGM1; p50; Tnfrsf5; Bp50; T-BAM; GP39
Mus musculus	RefSeq	ILMN_193970	ILMN_242411	CD40	NM_170702.2	NM_170702.2		21939	70608176	NM_170702.2	Cd40	NP_733803.2	ILMN_2502136	000580470	S	793	AGTCGCATCTCAGTGCAGGAGCGGCAGGTGACAGACAGCATAGCCTTGAG	2	+	164896351-164896400	2qH3	Mus musculus CD40 antigen (Cd40), transcript variant 5, mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IGI]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell capable of activating, perpetuating, or inhibiting an immune response [goid 2768] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]	TRAP; IMD3; AI326936; IGM; HIGM1; p50; Tnfrsf5; Bp50; T-BAM; GP39	TRAP; IMD3; AI326936; IGM; HIGM1; p50; Tnfrsf5; Bp50; T-BAM; GP39
Mus musculus	RefSeq	ILMN_193341	ILMN_242411	CD40	NM_170702.2	NM_170702.2		21939	70608176	NM_170702.2	Cd40	NP_733803.2	ILMN_2503129	004900309	S	1010	TTAAGGATGGAGGGAGAGCTCGGGCATCGGGGGTCCACAGTGATACCTAC	2	+	164896568-164896617	2qH3	Mus musculus CD40 antigen (Cd40), transcript variant 5, mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IGI]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell capable of activating, perpetuating, or inhibiting an immune response [goid 2768] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]	TRAP; IMD3; AI326936; IGM; HIGM1; p50; Tnfrsf5; Bp50; T-BAM; GP39	TRAP; IMD3; AI326936; IGM; HIGM1; p50; Tnfrsf5; Bp50; T-BAM; GP39
Mus musculus	Riken	ILMN_204565	ILMN_204565	PLCB3	ri|B930012F06|PX00162P15|AK047029|1986					AK047029	Plcb3		ILMN_2565957	006450750	S	1920	TATGGGGCGCCAATAAATCTCTGAACGGAGCTCTGGGCCCTGCTCCAGGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222150	ILMN_222150	PTGFR	NM_008966.3	NM_008966.3		19220	89179325	NM_008966.3	Ptgfr	NP_032992.1	ILMN_2745394	006290021	S	2398	TCTAGAATTAGCCAGGAGTTTGGCCCCACTGTTGCAGTTAACCTGAGGCT	3	-	151463540-151463589	3qH3	Mus musculus prostaglandin F receptor (Ptgfr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with prostaglandin F (PGF (2-alpha)) to initiate a change in cell activity [goid 4958] [evidence IEA]; Combining with a thromboxane (TXA) to initiate a change in cell activity [goid 4960] [evidence IEA]	PGF; fp; AI957154	PGF; fp; AI957154
Mus musculus	MEEBO	ILMN_223980	ILMN_223980	OLFR433	scl17188.2.75_113				22129402	NM_146717	Olfr433		ILMN_1241382	004210575	S	466	GCCCTGGTGCCTGCATGTCTCACTGCCAGTTTACCGTATTGCTTGAAAGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_219914	ILMN_219914	MTFMT	NM_027134.2	NM_027134.2		69606	141802994	NM_027134.2	Mtfmt	NP_081410.1	ILMN_2715153	004230139	S	692	AAGTCTGAACAATGGAAGGCCGCAGCCAGCCGAGGGAGTGACATATGCCC	9	+	65289449-65289495:65291686-65291688	9qC	Mus musculus mitochondrial methionyl-tRNA formyltransferase (Mtfmt), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA];  [goid 16742] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA [goid 4479] [evidence IEA]	2310020P08Rik	2310020P08Rik
Mus musculus	RefSeq	ILMN_219914	ILMN_219914	MTFMT	NM_027134.2	NM_027134.2		69606	141802994	NM_027134.2	Mtfmt	NP_081410.1	ILMN_2734667	001030168	S	158	TTGGCGGGTGCTGTTCCTCGGCACCGACCACTTTGCCCGGGAAACGCTGC	9	+	65283746-65283795	9qC	Mus musculus mitochondrial methionyl-tRNA formyltransferase (Mtfmt), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA];  [goid 16742] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA [goid 4479] [evidence IEA]	2310020P08Rik	2310020P08Rik
Mus musculus	MEEBO	ILMN_187536	ILMN_187536	SCL0002305.1_1	scl0002305.1_1	AK040557.1			26087926	AK040557.1	scl0002305.1_1		ILMN_2444967	007160332	S	3	GGGAGTATGGATGACTGTGTCCTTCAGTGCCTTTTGTCTCTGCTGAGCTG										
Mus musculus	RefSeq	ILMN_197862	ILMN_327880	OTTMUSG00000010431	NM_001085539.1	NM_001085539.1		626922	148229839	NM_001085539.1	OTTMUSG00000010431	NP_001079008.1	ILMN_1244787	005490538	S	818	GAGCGTCATCAAGGTCATTTCTCAGTTCCCCAAACTCAACAGTCTCCAGC				4qE1	Mus musculus predicted gene, OTTMUSG00000010431 (OTTMUSG00000010431), mRNA.					
Mus musculus	RefSeq	ILMN_201812	ILMN_244553	FNDC5	NM_027402.2	NM_027402.2		384061	47087147	NM_027402.2	Fndc5	NP_081678.1	ILMN_1214878	000870132	S	1012	CCGAAGGCTGTGTGTGAAAGGGGAGAAAGACGAGACTTCCAGGCAGGGCT	4	+	128820147-128820196	4qD2.2	Mus musculus fibronectin type III domain containing 5 (Fndc5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pxp; MGC129465; C87088; PeP; MGC129464; 1500001L03Rik; AI836596	Pxp; MGC129465; C87088; PeP; MGC129464; 1500001L03Rik; AI836596
Mus musculus	RefSeq	ILMN_244553	ILMN_244553	FNDC5	NM_027402.2	NM_027402.2		384061	47087147	NM_027402.2	Fndc5	NP_081678.1	ILMN_3033753	002230253	I	2411	CCAATGACTGCCCCTTCATTCGGGTCTCTAACAGCTCTCCAAGCTGGGTC	4	+	128821546-128821595	4qD2.2	Mus musculus fibronectin type III domain containing 5 (Fndc5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pxp; MGC129465; C87088; PeP; MGC129464; 1500001L03Rik; AI836596	Pxp; MGC129465; C87088; PeP; MGC129464; 1500001L03Rik; AI836596
Mus musculus	RefSeq	ILMN_244553	ILMN_244553	FNDC5	NM_027402.2	NM_027402.2		384061	47087147	NM_027402.2	Fndc5	NP_081678.1	ILMN_3107467	002710435	A	1466	GCGCCCCATTCTGAAGAAGGCACAAGTACATGGGAGAGTCCTGCCTTACT	4	+	128820601-128820650	4qD2.2	Mus musculus fibronectin type III domain containing 5 (Fndc5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pxp; MGC129465; C87088; PeP; MGC129464; 1500001L03Rik; AI836596	Pxp; MGC129465; C87088; PeP; MGC129464; 1500001L03Rik; AI836596
Mus musculus	RefSeq	ILMN_213542	ILMN_213542	GPX5	NM_010343.1	NM_010343.1		14780	6754061	NM_010343.1	Gpx5	NP_034473.1	ILMN_2902162	002970152	S	1461	GCTCCTTTCTGTGTGATCTTCACGGGGTCAGCTAGTGCTTATGAGTGGGG	13	-	21378416-21378465	13qA3.1	Mus musculus glutathione peroxidase 5 (Gpx5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]	MGC124177; MGC124090; Arep; AV379049; MGC124091	MGC124177; MGC124090; Arep; AV379049; MGC124091
Mus musculus	RefSeq	ILMN_213542	ILMN_213542	GPX5	NM_010343.1	NM_010343.1		14780	6754061	NM_010343.1	Gpx5	NP_034473.1	ILMN_2638087	007550341	S	284	GGAGGATCTGAAGCCATTTGGCTTGGTTATATTGGGCTTTCCCTGCAACC	13	-	21381136-21381185	13qA3.1	Mus musculus glutathione peroxidase 5 (Gpx5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]	MGC124177; MGC124090; Arep; AV379049; MGC124091	MGC124177; MGC124090; Arep; AV379049; MGC124091
Mus musculus	RefSeq	ILMN_213542	ILMN_213542	GPX5	NM_010343.1	NM_010343.1		14780	6754061	NM_010343.1	Gpx5	NP_034473.1	ILMN_2902167	001190156	S	1382	TCTGAGCAGATTGACTGGCACAGGAGGAGGGCATCTCCCTGATGCCAGGA	13	-	21378495-21378544	13qA3.1	Mus musculus glutathione peroxidase 5 (Gpx5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]	MGC124177; MGC124090; Arep; AV379049; MGC124091	MGC124177; MGC124090; Arep; AV379049; MGC124091
Mus musculus	RefSeq	ILMN_261103	ILMN_261103	1700021K02RIK	NM_001017441.1	NM_001017441.1		65971	63079698	NM_001017441.1	1700021K02Rik	NP_001017441.1	ILMN_3131640	000510450	A	602	CCCCATTGGGGATCCACAGTCCAATCGGAACCCCCAGCTTTCTACTTCTG	10	+	60642204-60642253	10qB4	Mus musculus RIKEN cDNA 1700021K02 gene (1700021K02Rik), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a spermatid cell [goid 48515] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Titest; Spatial; AI428928	Titest; Spatial; AI428928
Mus musculus	RefSeq	ILMN_200375	ILMN_200375	LOC386364	XM_359186.1	XM_359186.1			38081464	XM_359186.1	LOC386364		ILMN_1235516	007200047	S	356	GGGAGGAGAGGCCCTTTGTCCTGTGGAGCCTTGATGTCAAATCTAAGTGG										
Mus musculus	RefSeq	ILMN_208686	ILMN_208686	RAB14	NM_026697.3	NM_026697.3		68365	86355517	NM_026697.3	Rab14	NP_080973.1	ILMN_2588572	006520438	S	1049	TTTCACCTCTGTCTGTTGGAAGCAGTACTTTTTACTGCCTCCTTGTCTTC	2	-	35037707-35037756	2qB	Mus musculus RAB14, member RAS oncogene family (Rab14), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AI649155; 2810475J17Rik; 0610030G24Rik; A830021G03Rik; D030017L14Rik; AI314285	AI649155; 2810475J17Rik; 0610030G24Rik; A830021G03Rik; D030017L14Rik; AI314285
Mus musculus	Riken	ILMN_206429	ILMN_206429	GNMT	ri|C230052K04|PX00175C12|AK082459|2274					AK082459	Gnmt		ILMN_1238783	001430685	S	1861	GAGGTTAGCGCTCCCTTCTGGCCGTGGAGGGCACTGTACTCACATGTACT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + glycine = S-adenosyl-L-homocysteine + sarcosine [goid 17174] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219109	ILMN_219109	DCT	NM_010024.2	NM_010024.2		13190	142352300	NM_010024.2	Dct	NP_034154.1	ILMN_1251894	000130392	S	1885	GAAGGCTTCGCAAAGGCTATGCGCCCTTAATGGAGACAGGTCTCAGCAGC	14	-	118412279-118412328	14qE4	Mus musculus dopachrome tautomerase (Dct), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence IDA]; The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: L-dopachrome = 5,6-dihydroxyindole-2-carboxylate [goid 4167] [evidence IDA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	TRP-2; DT; TRP2; slt; Tyrp2; slaty; Tyrp-2	TRP-2; DT; TRP2; slt; Tyrp2; slaty; Tyrp-2
Mus musculus	RefSeq	ILMN_190722	ILMN_257476	PGM5	NM_175013.2	NM_175013.2		226041	68299817	NM_175013.2	Pgm5	NP_778178.3	ILMN_2472711	003400719	S	6404	GCAGGAGGAGCTAGTTTAAACCCTCACATGTGCAAGGAGGAGATCCTTGG	19	-	24754278-24754327	19qB	Mus musculus phosphoglucomutase 5 (Pgm5), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence ISO]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IDA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence ISO]	9530034F03Rik; D830025G17; 4833423B07	9530034F03Rik; D830025G17; 4833423B07
Mus musculus	RefSeq	ILMN_257476	ILMN_257476	PGM5	NM_175013.2	NM_175013.2		226041	68299817	NM_175013.2	Pgm5	NP_778178.3	ILMN_3129198	006860095	A	2959	GGCCTCAGGTCCTTTGTGCCTCTTGCTGCTTTGCCATTCCATCAGTGGCC	19	-	24757723-24757772	19qB	Mus musculus phosphoglucomutase 5 (Pgm5), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence ISO]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IDA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence ISO]	9530034F03Rik; D830025G17; 4833423B07	9530034F03Rik; D830025G17; 4833423B07
Mus musculus	RefSeq	ILMN_257476	ILMN_257476	PGM5	NM_175013.2	NM_175013.2		226041	68299817	NM_175013.2	Pgm5	NP_778178.3	ILMN_3052674	007100504	I	6349	GAAAACCCGAGGTGATGGACAGGTGGTTCAGTGGGTAGTCCTGTTTGCGG	19	-	24754333-24754382	19qB	Mus musculus phosphoglucomutase 5 (Pgm5), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence ISO]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IDA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence ISO]	9530034F03Rik; D830025G17; 4833423B07	9530034F03Rik; D830025G17; 4833423B07
Mus musculus	RefSeq	ILMN_216655	ILMN_216655	XLR4C	NM_183094.1	NM_183094.1		72891	34147070	NM_183094.1	Xlr4c	NP_898917.1	ILMN_2880052	001850382	S	1031	CCCCTGTGATTTCCTGTATGTATACCCTGGGAAATCCCTACTTGGGAACC	X	-	69486822-69486871	XqA7.3	Mus musculus X-linked lymphocyte-regulated 4C (Xlr4c), mRNA.				2900036K24Rik	2900036K24Rik
Mus musculus	RefSeq	ILMN_216655	ILMN_216655	XLR4C	NM_183094.1	NM_183094.1		72891	34147070	NM_183094.1	Xlr4c	NP_898917.1	ILMN_1233196	000580343	S	890	GATTATCACTTCCCCGTTCACACCTCTCAGGCACCAGAAAAACTCTACTG	X	-	69486963-69487012	XqA7.3	Mus musculus X-linked lymphocyte-regulated 4C (Xlr4c), mRNA.				2900036K24Rik	2900036K24Rik
Mus musculus	RefSeq	ILMN_216655	ILMN_216655	XLR4C	NM_183094.1	NM_183094.1		72891	34147070	NM_183094.1	Xlr4c	NP_898917.1	ILMN_1222568	005550576	S	1344	GACTGAATGAGGGCTTCCCTGCTGTGATCATTTTACTGTCTAAAGTTTGC	X	-	69486509-69486558	XqA7.3	Mus musculus X-linked lymphocyte-regulated 4C (Xlr4c), mRNA.				2900036K24Rik	2900036K24Rik
Mus musculus	Riken	ILMN_204300	ILMN_204300	B130011O06RIK	ri|B130011O06|PX00156J12|AK044921|2616					AK044921	B130011O06Rik		ILMN_1257065	002650661	S	2531	GCTGGAATCCTTTGCTTGTAATGTCAGGCAAGGCAGACGTGGGACCTGGC										
Mus musculus	RefSeq	ILMN_239148	ILMN_239148	TRIM58	NM_001039047.1	NM_001039047.1		216781	84794598	NM_001039047.1	Trim58	NP_001034136.1	ILMN_3083287	005310630	A	1220	GACCTCGCCGCATCGGGATCTTTTTGGACTACGAAGCTGGTGAAATCTCC	11	+	58454690-58454696:58455500-58455522:58455619-58455638	11qB1.3	Mus musculus tripartite motif-containing 58 (Trim58), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-128D9.6; Gm16; Gm1783	RP23-128D9.6; Gm16; Gm1783
Mus musculus	RefSeq	ILMN_199130	ILMN_239148	TRIM58	NM_001039047.1	NM_001039047.1		216781	84794598	NM_001039047.1	Trim58	NP_001034136.1	ILMN_1222524	004920477	S	1387	GAAGCAGCGCCTGGAAACTGGACGCCCAGGGGTATCTTTGATCTTGCTGC	11	+	58456577-58456626	11qB1.3	Mus musculus tripartite motif-containing 58 (Trim58), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-128D9.6; Gm16; Gm1783	RP23-128D9.6; Gm16; Gm1783
Mus musculus	RefSeq	ILMN_210902	ILMN_228599	CDC23	NM_178347.4	NM_178347.4		52563	146198638	NM_178347.4	Cdc23	NP_848124.1	ILMN_2610370	006370095	S	2705	GGCTAGCTCCTAACCACAGAATGATCTATAGCACCTACTGCACAAGCTCA				18qB1	Mus musculus CDC23 (cell division cycle 23, yeast, homolog) (Cdc23), mRNA.	A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	D18Ertd243e; 6030435O18	D18Ertd243e; 6030435O18
Mus musculus	RefSeq	ILMN_201273	ILMN_201273	LOC382138	XM_358711.1	XM_358711.1			38090331	XM_358711.1	LOC382138		ILMN_2541708	004850709	S	2806	GTGGATGGGCACAGGCTTCACTGGAGGATACACAGATGGACAGATGGACG										
Mus musculus	MEEBO	ILMN_192326	ILMN_192326	IGKV1-99_AJ231207_IG_KAPPA_VARIABLE_1-99_1	IGKV1-99_AJ231207_Ig_kappa_variable_1-99_1						IGKV1-99_AJ231207_Ig_kappa_variable_1-99_1		ILMN_2487065	005910129	S	8	GCCTGTTCTGCTAGTGGTGCTGCTATTGTTCACGAGTCCAGCCTCAAGCA										
Mus musculus	RefSeq	ILMN_250183	ILMN_250183	EG432870	NM_001034881.2	NM_001034881.2		432870	142352133	NM_001034881.2	EG432870	NP_001030053.1	ILMN_3161312	001340431	S	2111	TCTGCTCTGGCTGGAGCTTAAGAGAGTATTTGGCACATAGAAGGCCCAGG	14	+	67489797-67489842	14qD1	Mus musculus predicted gene, EG432870 (EG432870), mRNA.					
Mus musculus	MEEBO	ILMN_185142	ILMN_185142	WDR41	scl00218460.2_152	NM_172590.1			27369837	NM_172590.1	Wdr41		ILMN_2523101	007210086	S	19	CAAACAGGCCAGCCAGCCTGTTAAAAAGCAGGAAGAAAACGTTACCACGT										
Mus musculus	RefSeq	ILMN_196355	ILMN_196355	A930037J23RIK	NM_177365.2	NM_177365.2			31340770	NM_177365.2	A930037J23Rik		ILMN_2523803	004210482	S	2600	GCAGTCCAGTGTCTTGTAAAGAGCCAATGAAAGCTGACACCCATCGAGTA										
Mus musculus	RefSeq	ILMN_207235	ILMN_238290	OTTMUSG00000016644	XM_992268.1	XM_992268.1		667373	94406211	XM_992268.1	OTTMUSG00000016644	XP_997362.1	ILMN_1229197	006370451	S	1503	GCCCTGAGGCTCACAGGAGCAGTGAACCCTGAGTTTTGAGGAAGAGCTTC				19qC1	PREDICTED: Mus musculus predicted gene, OTTMUSG00000016644 (OTTMUSG00000016644), mRNA.					
Mus musculus	MEEBO	ILMN_188746	ILMN_188746	1700008H02RIK	scl6970.1.1_45				51708474	XM_359179	1700008H02Rik		ILMN_2538519	005290059	S	708	AGCCAGAAGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATAC										
Mus musculus	MEEBO	ILMN_188746	ILMN_188746	1700008H02RIK	scl6970.1.1_45				51708474	XM_359179	1700008H02Rik		ILMN_2481192	006420768	S	11	CTCCTCGTAGATATTGATGTCTCTTGCCCTTGATTACTTAATATATCCAC										
Mus musculus	MEEBO	ILMN_188746	ILMN_188746	1700008H02RIK	scl6970.1.1_45				51708474	XM_359179	1700008H02Rik		ILMN_2455352	003840520	S	3	GGGGGTACAAGAGAGAATAATGGGTGTGAATGTGATAGAAATGTATTATG										
Mus musculus	RefSeq	ILMN_212479	ILMN_212479	AEBP2	NM_009637.3	NM_009637.3		11569	86277300	NM_009637.3	Aebp2	NP_033767.1	ILMN_3138674	000610020	A	537	ACGGCGCTCATTACCGCGGCCACACGATTTCTTCGATGCACAAACACTGG	6	+	140590866-140590879:140592469-140592504	6qG2	Mus musculus AE binding protein 2 (Aebp2), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IMP]	B230313N05Rik	B230313N05Rik
Mus musculus	RefSeq	ILMN_221833	ILMN_221833	1700021K19RIK	NM_172615.3	NM_172615.3		224118	146198650	NM_172615.3	1700021K19Rik	NP_766203.1	ILMN_2741006	000730114	S	4860	CCTTCTAGAGCTCCTGAGTCCGCTGTCATTACTCACCAAATACCCATGTC				16qB3	Mus musculus RIKEN cDNA 1700021K19 gene (1700021K19Rik), mRNA.				5330403K09; mKIAA0226	5330403K09; mKIAA0226
Mus musculus	RefSeq	ILMN_213299	ILMN_213299	ATP8A2	NM_015803.2	NM_015803.2		50769	118131094	NM_015803.2	Atp8a2	NP_056618.1	ILMN_2635738	003850139	S	1011	ATGGCGCTGGTGAGCTCTGTGGGGGCCCTGTTCTGGAATGGGTCTCATGG	14	-	60646814-60646863	14qD1	Mus musculus ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 (Atp8a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	Atpc1b; AI415030; Ib	Atpc1b; AI415030; Ib
Mus musculus	RefSeq	ILMN_213299	ILMN_213299	ATP8A2	NM_015803.2	NM_015803.2		50769	118131094	NM_015803.2	Atp8a2	NP_056618.1	ILMN_2715636	006250528	S	3574	CCAAAGAGAATTCAAGGAAGAAATAAGACGCAAAGTTTCCTGATGGCTCC	14	-	60266639-60266663:60266664-60266688	14qD1	Mus musculus ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 (Atp8a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	Atpc1b; AI415030; Ib	Atpc1b; AI415030; Ib
Mus musculus	RefSeq	ILMN_214284	ILMN_214284	LMAN1L	NM_199222.1	NM_199222.1		235416	40363804	NM_199222.1	Lman1l	NP_954692.1	ILMN_3127595	001300600	A	1363	GAGCCTGCATTACCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCC	9	-	57405285-57405334	9qB	Mus musculus lectin, mannose-binding 1 like (Lman1l), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	BC020188; MGC28923; slamp	BC020188; MGC28923; slamp
Mus musculus	RefSeq	ILMN_214284	ILMN_214284	LMAN1L	NM_199222.1	NM_199222.1		235416	40363804	NM_199222.1	Lman1l	NP_954692.1	ILMN_3051282	000990484	I	1103	AGGCAGATGGCCCAGGCTGAGAAGCACTGGAAACAGCAGCTGGGGTCTAC	9	-	57409180-57409229	9qB	Mus musculus lectin, mannose-binding 1 like (Lman1l), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	BC020188; MGC28923; slamp	BC020188; MGC28923; slamp
Mus musculus	RefSeq	ILMN_217035	ILMN_217035	TMEM70	NM_027415.2	NM_027415.2		70397	117647262	NM_027415.2	Tmem70	NP_081691.2	ILMN_3153614	003420347	A	1431	GTATGGCGGTACATCAGAACCGGAGCGGTGGCTCAGTGGTTAAGAGCACT	1	+	16668058-16668107	1qA3	Mus musculus transmembrane protein 70 (Tmem70), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2210416J16Rik; 1110020A09Rik	2210416J16Rik; 1110020A09Rik
Mus musculus	MEEBO	ILMN_221440	ILMN_221440	ACP5	scl36120.9.10_29	NM_007388.1			6680623	NM_007388.1	Acp5		ILMN_2735660	002810327	S	1229	GGCAGAGAGGGAAGGGGAACCAAGGGGCTTACTTACAGGAAAGAAGTATG						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]		
Mus musculus	RefSeq	ILMN_246637	ILMN_246637	MLF1	NM_001039543.1	NM_001039543.1		17349	88196766	NM_001039543.1	Mlf1	NP_001034632.1	ILMN_3112219	002970703	A	742	GACGGTCAGGAAACACTGGAATGCGAAGTGTGGGTCATGAGCATCCAGGG	3	+	67201763-67201812	3qE1	Mus musculus myeloid leukemia factor 1 (Mlf1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby a precursor cell type acquires the specialized features of a myeloid progenitor cell. Myeloid progenitor cells include progenitor cells for any of the myeloid lineages [goid 2318] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	HLS7	HLS7
Mus musculus	RefSeq	ILMN_229221	ILMN_229221	APEX1	NM_009687.1	NM_009687.1		11792	6753085	NM_009687.1	Apex1	NP_033817.1	ILMN_2918114	006250138	S	486	AGTCTCTTATGGCATTGGCGAGGAAGAACATGATCAAGAAGGCCGGGTGA	14	+	51546012-51546028:51546131-51546163	14qC1	Mus musculus apurinic/apyrimidinic endonuclease 1 (Apex1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Ref-1; HAP1; APE; Apex	Ref-1; HAP1; APE; Apex
Mus musculus	MEEBO	ILMN_222599	ILMN_222599	GFRA2	scl46116.9.1_0	NM_008115.1			6679992	NM_008115.1	Gfra2		ILMN_2752130	003290204	S	1289	CCCAGGGAGTAAAAAGGTGATCAAACTTTACTCAGGCTCCTGCAGAGCCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192924	ILMN_192924	YY1	NM_009537.3	NM_009537.3		22632	118130338	NM_009537.3	Yy1	NP_033563.2	ILMN_1259496	006620669	S	1593	CCCAACAGGAGGACAATTCATGAACTTCGCATCAAAAGACAATTCTTTAT	12	+	110054111-110054160	12qF1	Mus musculus YY1 transcription factor (Yy1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IGI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AW488674; NF-E1	AW488674; NF-E1
Mus musculus	RefSeq	ILMN_216175	ILMN_216175	SPRED3	NM_182927.2	NM_182927.2		101809	40254389	NM_182927.2	Spred3	NP_891557.2	ILMN_1218180	007050020	S	3630	GTGCTGTATGGTGCTGTGAGATCTTCGGATTAAGCAGTGGGGACTTGGGG	7	-	29944224-29944273	7qB1	Mus musculus sprouty-related, EVH1 domain containing 3 (Spred3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IMP]	Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence IDA]	D130060H24Rik; Spred-3; AW047143	D130060H24Rik; Spred-3; AW047143
Mus musculus	RefSeq	ILMN_221284	ILMN_221284	CENPM	NM_178269.3	NM_178269.3		66570	122939140	NM_178269.3	Cenpm	NP_840000.2	ILMN_3104928	004120452	A	520	GCATTACTGCCCTCCACACGTTTGCTGCCAGTTCCAAAAGCAGCCACTGT	15	-	82064748-82064797	15qE1	Mus musculus centromere protein M (Cenpm), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]			2610019I03Rik; AI853711; Pane1	2610019I03Rik; AI853711; Pane1
Mus musculus	RefSeq	ILMN_221284	ILMN_221284	CENPM	NM_178269.3	NM_178269.3		66570	122939140	NM_178269.3	Cenpm	NP_840000.2	ILMN_2733472	004570440	S	495	GAACCCCCCATCCAAGGAGCTGTGAGCATTACTGCCCTCCACACGTTTGC	15	-	82064773-82064822	15qE1	Mus musculus centromere protein M (Cenpm), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]			2610019I03Rik; AI853711; Pane1	2610019I03Rik; AI853711; Pane1
Mus musculus	RefSeq	ILMN_189146	ILMN_189146	TUBB5	NM_011655.4	NM_011655.4		22154	142374674	NM_011655.4	Tubb5	NP_035785.1	ILMN_1217584	007100129	S	280	GTACCTACCACGGTGACAGCGACCTGCAGCTGGACCGAATCTCTGTGTAC	17	-	35973588-35973637	17qB1	Mus musculus tubulin, beta 5 (Tubb5), mRNA.	A heterodimer of tubulins alpha and beta that constitutes the protomer for microtubule assembly [goid 45298] [evidence NAS]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart [goid 51225] [evidence IDA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IDA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence NAS]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AI596182; M(beta)5; AA408537; B130022C14Rik	AI596182; M(beta)5; AA408537; B130022C14Rik
Mus musculus	RefSeq	ILMN_189146	ILMN_189146	TUBB5	NM_011655.4	NM_011655.4		22154	142374674	NM_011655.4	Tubb5	NP_035785.1	ILMN_1227164	000360689	S	1551	CCCTCAGCTTTCTCCAACTGCCCTTTGTCCTCCAGTTTCTTTCTGCTGCC	17	-	35971840-35971889	17qB1	Mus musculus tubulin, beta 5 (Tubb5), mRNA.	A heterodimer of tubulins alpha and beta that constitutes the protomer for microtubule assembly [goid 45298] [evidence NAS]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart [goid 51225] [evidence IDA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IDA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence NAS]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AI596182; M(beta)5; AA408537; B130022C14Rik	AI596182; M(beta)5; AA408537; B130022C14Rik
Mus musculus	MEEBO	ILMN_218263	ILMN_218263	4930588G05RIK	scl37550.2_173	XM_147435.1			20865289	XM_147435.1	4930588G05Rik		ILMN_2693701	006860368	S	1710	AGGTCTGAAAATCACATCTTGCAGGAAGTTGGGAAGGGCCCATCTCTTCT										
Mus musculus	RefSeq	ILMN_212808	ILMN_212808	EPSTI1	NM_029495.1	NM_029495.1		108670	30519880	NM_029495.1	Epsti1	NP_083771.1	ILMN_1217786	004880747	S	1342	GTAAAATGGTAAAAGGGAATCACGTGACATTCAGGGTAGGAAGAGCTTGG	14	+	78402088-78402137	14qD3	Mus musculus epithelial stromal interaction 1 (breast) (Epsti1), transcript variant a, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2310046K10Rik; BRESI1; 5033415K03Rik	2310046K10Rik; BRESI1; 5033415K03Rik
Mus musculus	RefSeq	ILMN_212808	ILMN_212808	EPSTI1	NM_029495.1	NM_029495.1		108670	30519880	NM_029495.1	Epsti1	NP_083771.1	ILMN_2707865	002760274	S	1189	GTGGGTGGCCAGTTTCTCTCCATCATTAGTGATGTGTAGTCTCTCAGAGA	14	+	78401935-78401984	14qD3	Mus musculus epithelial stromal interaction 1 (breast) (Epsti1), transcript variant a, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2310046K10Rik; BRESI1; 5033415K03Rik	2310046K10Rik; BRESI1; 5033415K03Rik
Mus musculus	MEEBO	ILMN_220780	ILMN_220780	4930513E20RIK	scl078804.1_163	XM_149158.1			20838187	XM_149158.1	4930513E20Rik		ILMN_2726746	000460187	S	2289	TGTGTTTGGACCGTGGCTTACTCTCTGATGAGTGTTCAGCAGCAGTCACC										
Mus musculus	RefSeq	ILMN_215732	ILMN_215732	RHOT2	NM_145999.2	NM_145999.2		214952	34328359	NM_145999.2	Rhot2	NP_666111.1	ILMN_2662962	006480037	S	539	ATCCCCGCCGACGTCACCCCGGAGAAGGTGCCCACTCATATCGTGGATTA	17	-	25981038-25981087	17qA3.3	Mus musculus ras homolog gene family, member T2 (Rhot2), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Arht2; Miro2; MGC31216	Arht2; Miro2; MGC31216
Mus musculus	RefSeq	ILMN_215732	ILMN_215732	RHOT2	NM_145999.2	NM_145999.2		214952	34328359	NM_145999.2	Rhot2	NP_666111.1	ILMN_2740348	002100110	S	2735	GCCTTATCCACACTGCGCCAGCTGCAGAGCAAGCGGAACTGACTTTCCTG	17	-	25975806-25975855	17qA3.3	Mus musculus ras homolog gene family, member T2 (Rhot2), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Arht2; Miro2; MGC31216	Arht2; Miro2; MGC31216
Mus musculus	RefSeq	ILMN_215732	ILMN_215732	RHOT2	NM_145999.2	NM_145999.2		214952	34328359	NM_145999.2	Rhot2	NP_666111.1	ILMN_2839134	001710520	S	2488	TGTCCTGCTGAGCCTGAGAGTACTGGTGCCAGGTGTGAGGCCTTAGCCTT	17	-	25976053-25976102	17qA3.3	Mus musculus ras homolog gene family, member T2 (Rhot2), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Arht2; Miro2; MGC31216	Arht2; Miro2; MGC31216
Mus musculus	RefSeq	ILMN_221071	ILMN_243512	TTC30B	NM_028235.1	NM_028235.1		72421	125988382	NM_028235.1	Ttc30b	NP_082511.1	ILMN_1247043	004120477	S	2187	CCTGCACTTTTAAATCCTGTCAAGTGAGATTGTGTAAGAACCCAGGCCCT	2	-	75774283-75774332	2qC3	Mus musculus tetratricopeptide repeat domain 30B (Ttc30b), mRNA. XM_911984 XM_986297	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2510042P03Rik; Tcc30b	2510042P03Rik; Tcc30b
Mus musculus	RefSeq	ILMN_243512	ILMN_243512	TTC30B	NM_028235.1	NM_028235.1		72421	125988382	NM_028235.1	Ttc30b	NP_082511.1	ILMN_2804996	001980202	S	1969	GCACACTGGGAAGAATACAGTCACATATGAATCAAGAAAGTTGAGGGCTC	2	-	75774501-75774550	2qC3	Mus musculus tetratricopeptide repeat domain 30B (Ttc30b), mRNA. XM_911984 XM_986297	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2510042P03Rik; Tcc30b	2510042P03Rik; Tcc30b
Mus musculus	RefSeq	ILMN_210787	ILMN_260760	OLFR906	NM_146803.2	NM_146803.2		258799	116174751	NM_146803.2	Olfr906	NP_667014.2	ILMN_1213721	002750070	S	782	AACCCTCCTCAGTTGGGTCTATGGATGAAGGAAAAATCTCTTCTGTCTTT	9	+	38296397-38296446	9qA5.1	Mus musculus olfactory receptor 906 (Olfr906), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR167-2	MOR167-2
Mus musculus	RefSeq	ILMN_252334	ILMN_252334	EG432838	NM_001034880.2	NM_001034880.2		432838	142367538	NM_001034880.2	EG432838	NP_001030052.1	ILMN_3161951	000770379	S	1814	CACATCACCCAAGATGACATATAGATGTGTCCAGAGCAGCCACATGCAAG	14	+	34860078-34860127	14qB	Mus musculus predicted gene, EG432838 (EG432838), mRNA.					
Mus musculus	MEEBO	ILMN_216545	ILMN_216545	PTPN3	scl019257.2_74	XM_355486.1			38078420	XM_355486.1	Ptpn3		ILMN_2672289	001770280	S	2445	GATCAGAAGTTGTCTCTTGTTGTCATGCTGACGACTCTCACCGAGCGAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_205044	ILMN_314799	A830005F24RIK	XM_001473764.1	XM_001473764.1		442803	149264210	XM_001473764.1	A830005F24Rik	XP_001473814.1	ILMN_1249797	004120164	S	464	TGTCAGTGGGAATAAAGGGGGTGAGGAACAACACCTCTTCCTATGAGGCC	13	+	48609906-48609955	13qA5	PREDICTED: Mus musculus RIKEN cDNA A830005F24 gene (A830005F24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221840	ILMN_221840	PRRG4	NM_178695.4	NM_178695.4		228413	142384247	NM_178695.4	Prrg4	NP_848810.2	ILMN_2741087	000610553	S	2538	AACACATCATAGTCTTATCAGATACTTGTCATAATCATATAAATGGCCAG	2	-	104670980-104671029	2qE2	Mus musculus proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) (Prrg4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC117538; TMG4; 9930111I18Rik	MGC117538; TMG4; 9930111I18Rik
Mus musculus	RefSeq	ILMN_198925	ILMN_198925	LOC194492	XM_112649.1	XM_112649.1			20342513	XM_112649.1	LOC194492		ILMN_1241311	002450537	S	367	GAAGGTCATGCAGCCGTCCAGGTCTCCCGCACCGTTACTTTGGAGCTATG										
Mus musculus	RefSeq	ILMN_252608	ILMN_252608	KCNJ6	NM_001025590.1	NM_001025590.1		16522	71051592	NM_001025590.1	Kcnj6	NP_001020761.1	ILMN_3162725	001570435	I	3268	GGAACACTGGAGCCGGCCAGAAAGGATTCTGCAGTCCCATAAATAGCAAC	16	-	95045613-95045662	16qC4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 6 (Kcnj6), transcript variant Girk2C, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA];  [goid 15467] [evidence IDA]	KCNJ7; BIR1; KATP2; weaver; Kir3.2; wv; GIRK2	KCNJ7; BIR1; KATP2; weaver; Kir3.2; wv; GIRK2
Mus musculus	Riken	ILMN_206291	ILMN_206291	BUB3	ri|A430051N17|PX00136K15|AK079742|1189					AK079742	Bub3		ILMN_1254853	005080598	S	955	ATGTGTAGAGTCTTAGAATGTGGAGTCTGTTGGAAAAGCCCTGCACTTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IMP]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IMP]			
Mus musculus	RefSeq	ILMN_219208	ILMN_219208	4921511H03RIK	NM_027603.2	NM_027603.2		70920	142363628	NM_027603.2	4921511H03Rik	NP_081879.1	ILMN_2705700	000520717	S	544	GCAATCAAAGTCCCCGTTTTGTACCTAGATGACGAATCACAGTCTCCGTC	5	+	7305268-7305317	5qA1	Mus musculus RIKEN cDNA 4921511H03 gene (4921511H03Rik), mRNA.					
Mus musculus	MEEBO	ILMN_192688	ILMN_192688	A930041G11RIK	scl41839.7_690				31342639	NM_177033	A930041G11Rik		ILMN_1217713	001990619	S	20	TGGATTAAACTCATTCAGTAGCAGCCTGCCCATGTTTGCACACTGACTGG										
Mus musculus	RefSeq	ILMN_214945	ILMN_226638	RYR1	NM_009109.2	NM_009109.2		20190	145046266	NM_009109.2	Ryr1	NP_033135.2	ILMN_1220181	007550524	S	224	CTCAAGGAACAGCTGAAGTTGTGTCTGGCCGCTGAGGGGTTCGGCAACCG	7	-	29903813-29903862	7qB1	Mus musculus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules) [goid 30314] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence TAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]	skrr; Ryr; AI528790	skrr; Ryr; AI528790
Mus musculus	RefSeq	ILMN_214945	ILMN_226638	RYR1	NM_009109.2	NM_009109.2		20190	145046266	NM_009109.2	Ryr1	NP_033135.2	ILMN_2730425	001110687	S	15020	GGCAGTGACTACTTCGACACAACCCCACATGGGTTTGAGACCCACACTCT	7	-	29789470-29789519	7qB1	Mus musculus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules) [goid 30314] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence TAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]	skrr; Ryr; AI528790	skrr; Ryr; AI528790
Mus musculus	RefSeq	ILMN_214945	ILMN_226638	RYR1	NM_009109.2	NM_009109.2		20190	145046266	NM_009109.2	Ryr1	NP_033135.2	ILMN_2733073	004220364	S	15197	CCTGCTGGAGACTGTTTCCGCAAGCAGTATGAGGACCAGCTTAGCTGAGG	7	-	29788474-29788476:29788477-29788523	7qB1	Mus musculus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules) [goid 30314] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence TAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]	skrr; Ryr; AI528790	skrr; Ryr; AI528790
Mus musculus	MEEBO	ILMN_222873	ILMN_222873	SLC8A1	scl020541.2_143	NM_011406.1			6755563	NM_011406.1	Slc8a1		ILMN_2756030	005890465	S	3105	TTGTGTGTATTGTGCACGGCTTTAGGGGGACAGGCACACTCGGTGCTGTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213144	ILMN_213144	SLC28A3	NM_022317.3	NM_022317.3		114304	91598782	NM_022317.3	Slc28a3	NP_071712.3	ILMN_2634129	006280181	S	4441	GAGCCAAAGACGACTCAAAAGGAAGAGTGTCAGCGGGGAAAGGGTTATGC	13	-	58654742-58654791	13qB1	Mus musculus solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 (Slc28a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, into, out of, within or between cells [goid 15860] [evidence IDA]; The directed movement of a pyrimidine nucleoside, a pyrimidine base covalently bonded to a ribose or deoxyribose sugar, into, out of, within or between cells [goid 15864] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nucleoside(out) + Na+(out) = nucleoside(in) + Na+(in) [goid 5415] [evidence IEA]; Interacting selectively with a nucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked either to ribose or deoxyribose [goid 1882] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: (pyrimidine nucleoside or adenine)(out) + Na+(out) = (pyrimidine nucleoside or adenine)(in) + Na+(in) [goid 15389] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: purine(out) + Na+(out) = nucleoside(in) + Na+(in) [goid 15390] [evidence IDA]	Cnt3	Cnt3
Mus musculus	RefSeq	ILMN_213144	ILMN_213144	SLC28A3	NM_022317.3	NM_022317.3		114304	91598782	NM_022317.3	Slc28a3	NP_071712.3	ILMN_2755204	002120259	S	220	CACAGTCAGGAACAGAGTTGTACAAAGCGGGGAACAAGGACACGCCAAAC	13	-	58689544-58689593	13qB1	Mus musculus solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 (Slc28a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, into, out of, within or between cells [goid 15860] [evidence IDA]; The directed movement of a pyrimidine nucleoside, a pyrimidine base covalently bonded to a ribose or deoxyribose sugar, into, out of, within or between cells [goid 15864] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nucleoside(out) + Na+(out) = nucleoside(in) + Na+(in) [goid 5415] [evidence IEA]; Interacting selectively with a nucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked either to ribose or deoxyribose [goid 1882] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: (pyrimidine nucleoside or adenine)(out) + Na+(out) = (pyrimidine nucleoside or adenine)(in) + Na+(in) [goid 15389] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: purine(out) + Na+(out) = nucleoside(in) + Na+(in) [goid 15390] [evidence IDA]	Cnt3	Cnt3
Mus musculus	RefSeq	ILMN_210556	ILMN_210556	POPDC3	NM_024286.1	NM_024286.1		78977	31745186	NM_024286.1	Popdc3	NP_077248.1	ILMN_2895568	005130228	S	1169	GCGCAGCATCGGTACATCTCCCGCCTGTTTTCGGTTTTAATTGGCAGTGA	10	+	45037574-45037623	10qB2	Mus musculus popeye domain containing 3 (Popdc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]			Pop3; MGC141238; AA682104	Pop3; MGC141238; AA682104
Mus musculus	RefSeq	ILMN_211567	ILMN_211567	ANKRD46	NM_175134.3	NM_175134.3		68839	141802446	NM_175134.3	Ankrd46	NP_780343.1	ILMN_1222794	006130575	S	2177	ATCAGCTTGCAGTGTCTTGCTTTTAACTAATCATGTTTGGTAGACGCAGG	15	-	36407636-36407685	15qB3.1	Mus musculus ankyrin repeat domain 46 (Ankrd46), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI987733; 1110054N06Rik; AI314978	AI987733; 1110054N06Rik; AI314978
Mus musculus	RefSeq	ILMN_215163	ILMN_215163	OTC	NM_008769.3	NM_008769.3		18416	141803523	NM_008769.3	Otc	NP_032795.1	ILMN_2656248	006760703	S	1432	TAATTATCATACACATTTCCTTCCACTAAACATTAAACACTTTGCTTACA	X	+	9897317-9897366	XqA1.1	Mus musculus ornithine transcarbamylase (Otc), nuclear gene encoding mitochondrial protein, mRNA.	An enzyme complex that catalyzes the transfer of a carbamoyl to ornithine, forming citrulline [goid 9348] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6526] [evidence IEA]; A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a carboxyl- or carbamoyl group from one compound (donor) to another (acceptor) [goid 16743] [evidence IEA]; Catalysis of the reaction: carbamoyl phosphate + L-ornithine = phosphate + L-citrulline [goid 4585] [evidence IEA]; Interacting selectively with an amino acid, organic acids containing one or more amino substituents [goid 16597] [evidence IEA]	Sf; spf; AI265390	Sf; spf; AI265390
Mus musculus	RefSeq	ILMN_200353	ILMN_200353	LOC386285	XM_359157.1	XM_359157.1			38081400	XM_359157.1	LOC386285		ILMN_2538460	005340170	S	558	GGGACTGCTTTTTGCATCCAAGGCTGTCACTTTCCTGGAACACACGTGCC										
Mus musculus	RefSeq	ILMN_234612	ILMN_234612	SP9	NM_001005343.1	NM_001005343.1		381373	52693932	NM_001005343.1	Sp9	NP_001005343.1	ILMN_3029538	003190075	I	1833	TCGAGGTCCAGAAACAAAAGCGAGCCATCCTCCGACATAAGTGCAGGTTC	2	+	73112848-73112897	2qC3	Mus musculus trans-acting transcription factor 9 (Sp9), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]		
Mus musculus	RefSeq	ILMN_234612	ILMN_234612	SP9	NM_001005343.1	NM_001005343.1		381373	52693932	NM_001005343.1	Sp9	NP_001005343.1	ILMN_3102783	005390048	A	438	TCCCCCACGTCGTCCGCCTTCAGCAGCGACTATGGCGGCCTTTTCTCCAA	2	+	73111453-73111502	2qC3	Mus musculus trans-acting transcription factor 9 (Sp9), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]		
Mus musculus	MEEBO	ILMN_215917	ILMN_215917	IMMT	scl0076614.1_242	NM_029673.1			21313261	NM_029673.1	Immt		ILMN_2665168	002340551	S	752	CAAGGCAGCAAGAGTTCTGGATAAAAGCAGTCTTCAAATCCCAAATGAGT						The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_209648	ILMN_209648	CACNA1C	scl766.8.1_1	NM_009781.1			6753227	NM_009781.1	Cacna1c		ILMN_2682984	006370470	S	5331	ACACCACAGAGATCAATCGGAACAACAACTTCCAGACGTTCCCCCAGGCT						A complex composed of proteins required for beta adrenergic receptor activation of protein kinase A. It includes the Cav 12. subunit of L-type calcium channel, protein kinase A regulatory subunit 2(PKAR2), adenyl cyclase, beta-adrenergic receptor, G-alpha-S, protein phosphatase 2A (PP2A) and caveolin 3 (CAV3) [goid 2095] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body [goid 60083] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IDA]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IMP]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP];  [goid 15270] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_192304	ILMN_329505	RAI16	XM_001480783.1	XM_001480783.1		239170	149265788	XM_001480783.1	Rai16	XP_001480833.1	ILMN_1237894	003840093	S	2088	TTTCGGGCAAACTGCTCCTGGTACGCAAGCAACTGATGGGCCAGGTTCCC	14	-	70985153-70985202	14qD2	PREDICTED: Mus musculus retinoic acid induced 16 (Rai16), mRNA.					
Mus musculus	RefSeq	ILMN_192304	ILMN_329505	RAI16	XM_001480783.1	XM_001480783.1		239170	149265788	XM_001480783.1	Rai16	XP_001480833.1	ILMN_2486863	003370537	S	3944	TCGTTTGAGAGGCTGGGCAATACTCAATGCACTTTGGCATTTGCATGGTG	14	-	70983142-70983191	14qD2	PREDICTED: Mus musculus retinoic acid induced 16 (Rai16), mRNA.					
Mus musculus	RefSeq	ILMN_220821	ILMN_220821	TAS2R129	NM_207029.1	NM_207029.1		387354	46309606	NM_207029.1	Tas2r129	NP_996912.1	ILMN_1213441	003420253	S	887	CTGTGCTATCGTGGCTGAAGCAGAGGTTTACATCATGGATTCCTAACATA	6	+	132902006-132902055	6qG1	Mus musculus taste receptor, type 2, member 129 (Tas2r129), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mt2r60; mGR29; Tas2r29; T2R29	mt2r60; mGR29; Tas2r29; T2R29
Mus musculus	RefSeq	ILMN_197411	ILMN_315119	A530010F05RIK	XM_001480732.1	XM_001480732.1		214394	149249712	XM_001480732.1	A530010F05Rik	XP_001480782.1	ILMN_1243554	001990563	S	735	TCAGAACAGAGGATGAGGGTGGCCTAGAGTGTCACTGGCTCCCCACTCCA				2qF1	PREDICTED: Mus musculus RIKEN cDNA A530010F05 gene (A530010F05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197950	ILMN_248638	EG433024	XR_005143.2	XR_005143.2		433024	149267893	XR_005143.2	EG433024		ILMN_1239315	006960524	S	183	CTGGTGAGAAGCCCCGGCAGAGGGGATTTGCCTCATAATTTCCCTGAGTC				16qB5	PREDICTED: Mus musculus predicted gene, EG433024 (EG433024), misc RNA.					
Mus musculus	RefSeq	ILMN_191573	ILMN_242345	RGS3	NM_019492.2	NM_019492.2		50780	126032316	NM_019492.2	Rgs3	NP_062365.2	ILMN_2611960	005340592	S	257	GCTTCCTTGTCCAAAAAAGATGCCTGCACCCAGACTTACCCACCTAGGAG	4	+	62242983-62243032	4qB3	Mus musculus regulator of G-protein signaling 3 (Rgs3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	C2PA-RGS3; PDZ-RGS3; RGS3S; 4930506N09Rik; C2pa	C2PA-RGS3; PDZ-RGS3; RGS3S; 4930506N09Rik; C2pa
Mus musculus	RefSeq	ILMN_191573	ILMN_242345	RGS3	NM_019492.2	NM_019492.2		50780	126032316	NM_019492.2	Rgs3	NP_062365.2	ILMN_2610679	002710348	S	484	CCAGACCACACAGATCATTCCAGACTGCCGAGACCCAGCTTTCCACGAGC	4	+	62267576-62267625	4qB3	Mus musculus regulator of G-protein signaling 3 (Rgs3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	C2PA-RGS3; PDZ-RGS3; RGS3S; 4930506N09Rik; C2pa	C2PA-RGS3; PDZ-RGS3; RGS3S; 4930506N09Rik; C2pa
Mus musculus	RefSeq	ILMN_191573	ILMN_242345	RGS3	NM_019492.2	NM_019492.2		50780	126032316	NM_019492.2	Rgs3	NP_062365.2	ILMN_2597135	001400707	S	677	ATCAGTGGCTGGTACTATCTGCTAGGGGAGGACCTGGGTCGGACCAAGCA	4	+	62277511-62277560	4qB3	Mus musculus regulator of G-protein signaling 3 (Rgs3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	C2PA-RGS3; PDZ-RGS3; RGS3S; 4930506N09Rik; C2pa	C2PA-RGS3; PDZ-RGS3; RGS3S; 4930506N09Rik; C2pa
Mus musculus	RefSeq	ILMN_187907	ILMN_237682	6332401O19RIK	NM_177013.3	NM_177013.3		319832	125347402	NM_177013.3	6332401O19Rik	NP_795987.2	ILMN_1254798	006290278	S	4923	GAAGTCCGGATATCAAAGAGAAACCCCAATAAAGTTGCTAAACACATTGC	6	-	24901153-24901202	6qA3.1	Mus musculus RIKEN cDNA 6332401O19 gene (6332401O19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187907	ILMN_237682	6332401O19RIK	NM_177013.3	NM_177013.3		319832	125347402	NM_177013.3	6332401O19Rik	NP_795987.2	ILMN_1259919	003460685	S	2243	CCCTATAGATCCCAGGGCCGAATGAAATTAGACCACCTTCAATCATGTTC	6	-	24903833-24903882	6qA3.1	Mus musculus RIKEN cDNA 6332401O19 gene (6332401O19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211541	ILMN_211541	ASAH1	NM_019734.1	NM_019734.1		11886	9790018	NM_019734.1	Asah1	NP_062708.1	ILMN_2717970	005270093	S	430	TATTTCATTCAACATTTTCTATGAATTGTTTACCATGTGTACATCAATCA	8	-	42439987-42440036	8qA4	Mus musculus N-acylsphingosine amidohydrolase 1 (Asah1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine [goid 17040] [evidence IDA]	AC; 2310081N20Rik; AU044555; AL022942; Asah	AC; 2310081N20Rik; AU044555; AL022942; Asah
Mus musculus	RefSeq	ILMN_211541	ILMN_211541	ASAH1	NM_019734.1	NM_019734.1		11886	9790018	NM_019734.1	Asah1	NP_062708.1	ILMN_2629591	000130121	S	11	AGTCCCTCGGAGCGGCGCTTGCAGCTGGGAAGATGCGGGGCCAAAGTCTT	8	-	42459921-42459938:42459939-42459970	8qA4	Mus musculus N-acylsphingosine amidohydrolase 1 (Asah1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine [goid 17040] [evidence IDA]	AC; 2310081N20Rik; AU044555; AL022942; Asah	AC; 2310081N20Rik; AU044555; AL022942; Asah
Mus musculus	RefSeq	ILMN_211541	ILMN_211541	ASAH1	NM_019734.1	NM_019734.1		11886	9790018	NM_019734.1	Asah1	NP_062708.1	ILMN_1231966	000430215	S	1838	CTCTTTTTCCTAGTTATTCTGCCTGCCAGTAACCCCAGGAAGAGTCTAGC	8	-	42428900-42428949	8qA4	Mus musculus N-acylsphingosine amidohydrolase 1 (Asah1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine [goid 17040] [evidence IDA]	AC; 2310081N20Rik; AU044555; AL022942; Asah	AC; 2310081N20Rik; AU044555; AL022942; Asah
Mus musculus	RefSeq	ILMN_209990	ILMN_209990	MGRN1	NM_029657.3	NM_029657.3		17237	118130643	NM_029657.3	Mgrn1	NP_083933.1	ILMN_1254488	004260196	S	3017	GGGGTGCAGCCTACACACTTACCTGTCTCAGACTCACATGTACTATCATC	16	+	4938175-4938224	16qA1	Mus musculus mahogunin, ring finger 1 (Mgrn1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	md; 2610042J20Rik; nc; N28182; mKIAA0544	md; 2610042J20Rik; nc; N28182; mKIAA0544
Mus musculus	RefSeq	ILMN_213338	ILMN_224737	SGOL2	NM_199007.1	NM_199007.1		68549	51092284	NM_199007.1	Sgol2	NP_950172.1	ILMN_2636110	005360195	S	4501	GGCTCTGCTTTCCTCATGAGGACCTGCTAGAGGGTGGAACTCAAGTCACC	1	+	58082400-58082449	1qC1.3	Mus musculus shugoshin-like 2 (S. pombe) (Sgol2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]; A cohesin complex that mediates sister chromatid cohesion during mitosis; has a subunit composition distinct from that of the meiotic cohesin complex [goid 30892] [evidence ISO]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cell cycle process whereby centromeres of sister chromatids are joined during meiosis [goid 51754] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D1Ertd8e; AV008062; 4932411A20Rik; 5730576N04Rik; Tripin; 1110007N04Rik; AU018846	D1Ertd8e; AV008062; 4932411A20Rik; 5730576N04Rik; Tripin; 1110007N04Rik; AU018846
Mus musculus	RefSeq	ILMN_210417	ILMN_210417	4933411K20RIK	NM_025747.3	NM_025747.3		66756	142361488	NM_025747.3	4933411K20Rik	NP_080023.1	ILMN_2605417	004060037	S	4341	AATGTCTGTACACCGTCACAGCGAATGAGCTCACTGCTAATGGCCGAGTT	8	+	47280762-47280811	8qB1.1	Mus musculus RIKEN cDNA 4933411K20 gene (4933411K20Rik), mRNA.				mKIAA1430; 1110068E21Rik; AW049273	mKIAA1430; 1110068E21Rik; AW049273
Mus musculus	RefSeq	ILMN_198483	ILMN_318341	ISOC2A	XM_001475261.1	XM_001475261.1		664994	149256765	XM_001475261.1	Isoc2a	XP_001475311.1	ILMN_1236008	006280192	S	288	CAGGGCATTCGGCCAGTGAGTAAGACCTGCTTCAGTATGGTGCCCGCCTT				7qA1	PREDICTED: Mus musculus isochorismatase domain containing 2a (Isoc2a), mRNA.					
Mus musculus	Riken	ILMN_205188	ILMN_205188	D030005B14RIK	ri|D030005B14|PX00179A16|AK050695|2035					AK050695	D030005B14Rik		ILMN_2570659	000460152	S	1791	TTCTGAGGTACTGAGCTCCTTGGAGTGGTGGCTTCTGCTGAGACAACCCC										
Mus musculus	RefSeq	ILMN_223780	ILMN_223780	PIWIL1	NM_021311.3	NM_021311.3		57749	118130501	NM_021311.3	Piwil1	NP_067286.1	ILMN_2781611	006270390	S	3782	TGGGGGGCCAGTTCAGGTGCCAGGTGAGGTACGGCCACATCTATTTGCCT	5	+	129261187-129261236	5qG1.3	Mus musculus piwi-like homolog 1 (Drosophila) (Piwil1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with single-stranded RNA [goid 3727] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC150073; MIWI	MGC150073; MIWI
Mus musculus	MEEBO	ILMN_187019	ILMN_187019	COL23A1	scl072794.4_14				23510252	NM_153393	Col23a1		ILMN_1241768	000060240	S	3	GGAGGGCCACACTCCCCAGACTGTACACATGCATTCCTTGCTAAGCAGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200183	ILMN_200183	LOC385877	XM_358981.1	XM_358981.1			38080836	XM_358981.1	LOC385877		ILMN_2537869	006330392	S	86	GAAAATTGGACATAGTACTACTGGAGGATCCTGCAATACCTCTCCTGGGC										
Mus musculus	RefSeq	ILMN_214752	ILMN_214752	OTOF	NM_031875.2	NM_031875.2		83762	154240678	NM_031875.2	Otof	NP_114081.2	ILMN_2651556	002100228	S	6909	GGCCAGTGTGTGTCAGCTAGTACACAAGCTCCAAGTGTGAATCAGGTGTA				5qB1	Mus musculus otoferlin (Otof), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_214752	ILMN_214752	OTOF	NM_031875.2	NM_031875.2		83762	154240678	NM_031875.2	Otof	NP_114081.2	ILMN_2674951	003060273	S	2243	CTACCTGGAGCGCAAGCCCTGCATCTATATCAAGAGCTGGTGGCCTGACC				5qB1	Mus musculus otoferlin (Otof), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_221993	ILMN_221993	BCAR1	NM_009954.2	NM_009954.2		12927	40254592	NM_009954.2	Bcar1	NP_034084.2	ILMN_2743133	001770189	S	2945	AGTAGGAGTGTACCGTGGGCTGGGGATCACCAGGATTGGTGCACATGGGC	8	-	114234521-114234570	8qE1	Mus musculus breast cancer anti-estrogen resistance 1 (Bcar1), mRNA.	A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IDA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Crkas; Cas; AI385681	Crkas; Cas; AI385681
Mus musculus	RefSeq	ILMN_214431	ILMN_214431	COQ4	NM_178693.2	NM_178693.2		227683	31341177	NM_178693.2	Coq4	NP_848808.1	ILMN_2885590	004760398	S	1716	GTCATGACCAGCACAAACATGCCATGGTGTGCATGCACTCACACCTGTGC	2	+	29619481-29619530	2qB	Mus musculus coenzyme Q4 homolog (yeast) (Coq4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A330041N06; D2Ertd97e	A330041N06; D2Ertd97e
Mus musculus	RefSeq	ILMN_214994	ILMN_214994	SOX30	NM_173384.1	NM_173384.1		214105	27734193	NM_173384.1	Sox30	NP_775560.1	ILMN_2764380	005390433	S	2804	GGACTAGAACTCAGTTGCTAAATTTAATTTACACTAATAACCAATTATAA	11	+	45831303-45831352	11qB1.1	Mus musculus SRY-box containing gene 30 (Sox30), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214994	ILMN_214994	SOX30	NM_173384.1	NM_173384.1		214105	27734193	NM_173384.1	Sox30	NP_775560.1	ILMN_1230836	002350739	S	1824	GAAGCACTCCGATACCCCCGGCGACTCCCATTCCACACTCACACGTCTAT	11	+	45805460-45805509	11qB1.1	Mus musculus SRY-box containing gene 30 (Sox30), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214027	ILMN_214027	OLFR1015	NM_146571.1	NM_146571.1		258564	22129504	NM_146571.1	Olfr1015	NP_666782.1	ILMN_1224677	007330687	S	762	CCTGCTCTTCATGTATTCAAGACCCAGTTCCAACTACTCCCTGGAGAGAG	2	+	85626431-85626480	2qD	Mus musculus olfactory receptor 1015 (Olfr1015), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR213-3	MOR213-3
Mus musculus	Riken	ILMN_203334	ILMN_203334	4931437C01RIK	ri|4931437C01|PX00016P24|AK029911|5049					AK029911	4931437C01Rik		ILMN_1226050	000520239	S	680	GGGTTCATAGCAGTTTTCCCAAGGCTCACTGCATTAGGATGCTGCCAGAC										
Mus musculus	RefSeq	ILMN_189667	ILMN_189667	XYLT2	NM_145828.2	NM_145828.2		217119	118130214	NM_145828.2	Xylt2	NP_665827.1	ILMN_2811018	006660445	S	2654	CAGGTGATCTGTGGGGGCTACTGTGGAGTTGGACTTTAGTGAGCAGGCCT	11	-	94525400-94525449	11qD	Mus musculus xylosyltransferase II (Xylt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IEA]; Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate [goid 30158] [evidence IEA]	XT2; E030002B02Rik; XT-II; xylT-II	XT2; E030002B02Rik; XT-II; xylT-II
Mus musculus	RefSeq	ILMN_193238	ILMN_193238	SLC35B1	NM_016752.1	NM_016752.1		110172	7949136	NM_016752.1	Slc35b1	NP_058032.1	ILMN_2495289	003360451	S	1108	CAGTGGCATCTTGGGAAAATGGACTCGGGTCATGATAAGGGATTGGGTTC	11	+	95252905-95252954	11qD	Mus musculus solute carrier family 35, member B1 (Slc35b1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	Ugalt2	Ugalt2
Mus musculus	RefSeq	ILMN_221912	ILMN_211126	PARD6B	NM_021409.1	NM_021409.1		58220	10946765	NM_021409.1	Pard6b	NP_067384.1	ILMN_2741968	001850736	S	880	AGCGACGAGGACGACATCATCATTGAAGACAGTGGCGAGCCGCAGCAGAT	2	+	167924465-167924514	2qH3	Mus musculus par-6 (partitioning defective 6) homolog beta (C. elegans) (Pard6b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV025615; Par6b	AV025615; Par6b
Mus musculus	RefSeq	ILMN_215633	ILMN_215633	AGXT2L1	NM_027907.1	NM_027907.1		71760	21313029	NM_027907.1	Agxt2l1	NP_082183.1	ILMN_2661820	003520671	S	2182	ATGTTGTGGGAACTGGAAGGGAACACATACACAGAGACCCTTGCGTGAGG	3	+	130624396-130624445	3qG3	Mus musculus alanine-glyoxylate aminotransferase 2-like 1 (Agxt2l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	1300019H02Rik; AI195447	1300019H02Rik; AI195447
Mus musculus	RefSeq	ILMN_220032	ILMN_220032	SLC19A1	NM_031196.2	NM_031196.2		20509	118130166	NM_031196.2	Slc19a1	NP_112473.1	ILMN_1225544	004880703	S	1979	GGCTTTGTGAACCACGTGCCAGGCCACTGCGAGTCTGGGTTGTCTATTGC	10	+	76512855-76512904	10qC1	Mus musculus solute carrier family 19 (sodium/hydrogen exchanger), member 1 (Slc19a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Catalysis of the transfer of reduced folate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8518] [evidence IEA]	RFC1; RFC; RFC-1; AI323572	RFC1; RFC; RFC-1; AI323572
Mus musculus	Riken	ILMN_204742	ILMN_204742	B930049N04RIK	ri|B930049N04|PX00164A20|AK047330|1873					AK047330	B930049N04Rik		ILMN_2567282	007050445	S	1555	TGAACTCCAGAAGGAAGAGAGCATGGCCCATTTGGCTCTGAGTCCCTGGC										
Mus musculus	RefSeq	ILMN_220474	ILMN_232180	PSTPIP2	NM_013831.4	NM_013831.4		19201	126506309	NM_013831.4	Pstpip2	NP_038859.3	ILMN_2722513	000060678	S	819	GGCTCAGGAATGTGAACGAATCAACTTCTTCCGGAATGCACTGTGGTTGC	18	+	78112108-78112157	18qE3	Mus musculus proline-serine-threonine phosphatase-interacting protein 2 (Pstpip2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence NAS]	MAYP; cmo	MAYP; cmo
Mus musculus	RefSeq	ILMN_221149	ILMN_221149	HIF3A	NM_016868.1	NM_016868.1		53417	8393527	NM_016868.1	Hif3a	NP_058564.1	ILMN_2760494	004290201	S	381	GCCGAGGGAGACATGGCTTACCTGTCGGAAAATGTCAGCAAGCACCTGGG	7	-	17640040-17640089	7qA2	Mus musculus hypoxia inducible factor 3, alpha subunit (Hif3a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IPI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IPI]	MOP7; Ipas	MOP7; Ipas
Mus musculus	RefSeq	ILMN_221149	ILMN_221149	HIF3A	NM_016868.1	NM_016868.1		53417	8393527	NM_016868.1	Hif3a	NP_058564.1	ILMN_1247370	003290079	S	2107	AGAAAGGACTCAGCCACACTCCACACCAGCAGCCTACACCCAGGATGGGG	7	-	17621132-17621181	7qA2	Mus musculus hypoxia inducible factor 3, alpha subunit (Hif3a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IPI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IPI]	MOP7; Ipas	MOP7; Ipas
Mus musculus	RefSeq	ILMN_217877	ILMN_237138	ADAM34	NM_145745.1	NM_145745.1		252866	68989248	NM_145745.1	Adam34	NP_665688.1	ILMN_2688694	001340367	S	2434	CCTAAAATAATCGCTGCCAGACTCAAAATCTGGTGATAAAAATCTCACTA	8	-	44735691-44735740	8qA4	Mus musculus a disintegrin and metallopeptidase domain 34 (Adam34), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209179	ILMN_237138	ADAM34	NM_145745.1	NM_145745.1		252866	68989248	NM_145745.1	Adam34	NP_665688.1	ILMN_2622239	006620296	S	536	CTTGATATCCAGAAACTTCTTATTATTCACTTATAGTGACCAAGGTGATC	8	-	44737589-44737638	8qA4	Mus musculus a disintegrin and metallopeptidase domain 34 (Adam34), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218732	ILMN_218732	RGS10	NM_026418.2	NM_026418.2		67865	142388581	NM_026418.2	Rgs10	NP_080694.1	ILMN_2699531	001770239	S	817	CTGCCAATACTGGACACTCAGCCTTTCAATCCTGATTAAAGTGTTCGTGA	7	-	135517147-135517196	7qF3	Mus musculus regulator of G-protein signalling 10 (Rgs10), mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC129414; 2310010N19Rik	MGC129414; 2310010N19Rik
Mus musculus	RefSeq	ILMN_221776	ILMN_221776	ARL6IP4	NM_144509.1	NM_144509.1		65105	21362282	NM_144509.1	Arl6ip4	NP_653092.1	ILMN_3034691	003420228	I	440	CTCGAGGAACTGTTCAGCCTCCAGATCCCAGGGCCACAAGGCTGGCAGCG	5	+	124377165-124377214	5qF	Mus musculus ADP-ribosylation factor-like 6 interacting protein 4 (Arl6ip4), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Aip-4; Srp25; AA408210; AA408365	Aip-4; Srp25; AA408210; AA408365
Mus musculus	RefSeq	ILMN_221776	ILMN_221776	ARL6IP4	NM_144509.1	NM_144509.1		65105	21362282	NM_144509.1	Arl6ip4	NP_653092.1	ILMN_3108440	000020037	A	1080	TAGGTCCAGGTGCCTTTCCTACAGCCCAGCATCCTCTTGGGTGCAGTGGA	5	+	124378711-124378760	5qF	Mus musculus ADP-ribosylation factor-like 6 interacting protein 4 (Arl6ip4), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Aip-4; Srp25; AA408210; AA408365	Aip-4; Srp25; AA408210; AA408365
Mus musculus	Riken	ILMN_202782	ILMN_202782	4632422H02RIK	ri|4632422H02|PX00013A19|AK028530|2531					AK028530	4632422H02Rik		ILMN_2552251	001430661	S	2240	CAGGGTTGCACTCTAGAGCCTGGGCTTGCCTGGAATTTATGATCTTTGGC										
Mus musculus	RefSeq	ILMN_199721	ILMN_199721	LOC383861	XM_357298.1	XM_357298.1			38076540	XM_357298.1	LOC383861		ILMN_1255424	002340053	S	199	CTGATCGGACTCATACAGGTCGGCGAGGTCAGCAACAGGGACATCGTGGA										
Mus musculus	MEEBO	ILMN_218747	ILMN_218747	MCMDC1	scl37965.7.1_91	XM_125626.1			20859506	XM_125626.1	Mcmdc1		ILMN_2699714	004050047	S	1438	ATTGGATCTACTAGTGCAGGTACTGTATAACAATTTTACATAATTTAAGA										
Mus musculus	RefSeq	ILMN_258380	ILMN_258380	EXTL1	NM_019578.1	NM_019578.1		56219	9624985	NM_019578.1	Extl1	NP_062524.1	ILMN_2879534	007210669	S	3170	ACTCCACGTTGGCCTGAAAACTTGGGCTGTTGGCAGATGGGCTGATCGCC	4	-	133912414-133912463	4qD3	Mus musculus exostoses (multiple)-like 1 (Extl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	D430033M16Rik	D430033M16Rik
Mus musculus	RefSeq	ILMN_215297	ILMN_215297	NOXA1	NM_172204.3	NM_172204.3		241275	141802449	NM_172204.3	Noxa1	NP_757341.2	ILMN_2657776	000730653	S	1485	TGCTTTGTGGTCCCAGCTGGCGCCTATGTGGAAGCCATGCTTGTACTGGG	2	-	24941268-24941317	2qA3	Mus musculus NADPH oxidase activator 1 (Noxa1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Increases the activity of the enzyme superoxide-generating NADPH oxidase [goid 16176] [evidence IDA]	SDCCAG31; NY-CO-31	SDCCAG31; NY-CO-31
Mus musculus	MEEBO	ILMN_224265	ILMN_224265	OLFR283	scl9773.1.1_85				22128872	NM_147036	Olfr283		ILMN_2777542	002490707	S	632	TGATACTCTTGTCATACATTCGCATCCTGCTCACCATCCTGGGGATAAGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210388	ILMN_255755	EYA3	NM_210071.1	NM_210071.1		14050	46877075	NM_210071.1	Eya3	NP_997592.1	ILMN_1243290	002230132	S	1727	CCAGGCTTTAGAGCTTGACTTCCTCTGAGAACTGGAATGTGGACCCTTCC	4	+	132277247-132277274:132277275-132277296	4qD2.3	Mus musculus eyes absent 3 homolog (Drosophila) (Eya3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]	AI844637	AI844637
Mus musculus	Riken	ILMN_207195	ILMN_207195	AP3M2	ri|A830050D12|PX00661F20|AK080668|1351					AK080668	Ap3m2		ILMN_1214679	002060553	S	1060	CCCTGTCGGTCTCTTTTCTGGGGATAGCGAGTGTCTTTCTGTGAGGACTG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_205735	ILMN_205735	SS18	ri|A330042G19|PX00131I24|AK039430|2195					AK039430	Ss18		ILMN_1247448	000460358	S	1931	GCACTGTCACCAGGGCTACACACAGAAGCGTTGGTCAGTGATGGTGCATA										
Mus musculus	Riken	ILMN_206602	ILMN_206602	E030022B18RIK	ri|E030022B18|PX00205J23|AK087033|2117					AK087033	E030022B18Rik		ILMN_1221106	003310255	S	1861	GTGTCCAAGGTGAACATCTCAGCATTGATCTGGCTTCCTACCGGGTTGTC										
Mus musculus	RefSeq	ILMN_194609	ILMN_237149	STAMBPL1	NM_029682.4	NM_029682.4		76630	118130651	NM_029682.4	Stambpl1	NP_083958.3	ILMN_1252400	006940491	S	1581	GGCTCACCAACGCTGGCATGCTTGAGGTTTCTACTTGTAAAAAGAAGGGC	19	+	34314007-34314056	19qC1	Mus musculus Stam binding protein like 1 (Stambpl1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	1700095N21Rik; ALMalpha; 8230401J17Rik; AMSH-FP	1700095N21Rik; ALMalpha; 8230401J17Rik; AMSH-FP
Mus musculus	RefSeq	ILMN_218383	ILMN_218383	PEMT	NM_008819.2	NM_008819.2		18618	33667035	NM_008819.2	Pemt	NP_032845.2	ILMN_1218263	000620349	S	652	TTGGAAAGCTGGACTGGCCTCTCGGCTGCCCCAAGCAACAACCCTTCCCA	11	-	59784251-59784300	11qB1.3	Mus musculus phosphatidylethanolamine N-methyltransferase (Pemt), nuclear gene encoding mitochondrial protein, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence TAS]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence ISS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidylethanolamine = S-adenosyl-L-homocysteine + phosphatidyl-N-methylethanolamine [goid 4608] [evidence ISS]	AI255394; Pempt; Pempt2	AI255394; Pempt; Pempt2
Mus musculus	RefSeq	ILMN_201073	ILMN_201073	LOC381985	XM_356035.1	XM_356035.1			38088594	XM_356035.1	LOC381985		ILMN_1218548	000290241	S	33	TGGGACCCAGCGTTCTGCAAACCGTCTACAAGTGCTGTTCTCAGCCACCC										
Mus musculus	MEEBO	ILMN_193476	ILMN_193476	9330111N05RIK	scl44582.1_28						9330111N05Rik		ILMN_1229596	001400040	S	19	CGAGGTCTCTTTATATCGTGAACTTGGGAAGAACTGATCAGTGGGCTGGC										
Mus musculus	RefSeq	ILMN_239900	ILMN_239900	4931408C20RIK	NM_001033764.1	NM_001033764.1		210940	85702058	NM_001033764.1	4931408C20Rik	NP_001028936.1	ILMN_3080840	000150669	A	4010	TGAGCAACCAGGCATTGTCCTTAGAGCCTGTGACCCACATCAGAATACAG	1	-	26626618-26626667	1qA5	Mus musculus RIKEN cDNA 4931408C20 gene (4931408C20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_239900	ILMN_239900	4931408C20RIK	NM_001033764.1	NM_001033764.1		210940	85702058	NM_001033764.1	4931408C20Rik	NP_001028936.1	ILMN_3010442	004230367	I	4196	GGCCAAAGAATGGGTACCTCAAGCCATTCAGAAGATGTCCCATCTCCCCA	1	-	26626432-26626481	1qA5	Mus musculus RIKEN cDNA 4931408C20 gene (4931408C20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_185073	ILMN_248622	EVI5L	NM_001039578.2	NM_001039578.2		213027	111074547	NM_001039578.2	Evi5l	NP_001034667.2	ILMN_1213296	004760497	S	3818	CTTGTGTGCTCCTCATGTGCCCCTCCACACTGCCCACCACCATTTTGCAC	8	+	4207931-4207980	8qA1.1	Mus musculus ecotropic viral integration site 5 like (Evi5l), mRNA.			Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence ISO]	1700084G18Rik; MGC29047; 2310039H16Rik; EVI5L; 3110007G05Rik	1700084G18Rik; MGC29047; 2310039H16Rik; EVI5L; 3110007G05Rik
Mus musculus	RefSeq	ILMN_210942	ILMN_210942	SMC1A	NM_019710.1	NM_019710.1		24061	9790236	NM_019710.1	Smc1a	NP_062684.1	ILMN_2732689	006940689	S	3876	ACCCCCTATCATGGATCGCATGACACCATGCCCCTTATGCTTGTGTGCAT	X	+	148496422-148496471	XqF3	Mus musculus structural maintenance of chromosomes 1A (Smc1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IPI]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SMCB; KIAA0178; mKIAA0178; Smc1; SB1.8; Smc1l1; Smc1alpha; 5830426I24Rik	SMCB; KIAA0178; mKIAA0178; Smc1; SB1.8; Smc1l1; Smc1alpha; 5830426I24Rik
Mus musculus	RefSeq	ILMN_210942	ILMN_210942	SMC1A	NM_019710.1	NM_019710.1		24061	9790236	NM_019710.1	Smc1a	NP_062684.1	ILMN_2610835	003190220	S	2877	GACCGCCACAACCTGCTACAGGCCTGTAAGATGCAGGACATCAAACTGCC	X	+	148481502-148481551	XqF3	Mus musculus structural maintenance of chromosomes 1A (Smc1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IPI]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SMCB; KIAA0178; mKIAA0178; Smc1; SB1.8; Smc1l1; Smc1alpha; 5830426I24Rik	SMCB; KIAA0178; mKIAA0178; Smc1; SB1.8; Smc1l1; Smc1alpha; 5830426I24Rik
Mus musculus	RefSeq	ILMN_210942	ILMN_210942	SMC1A	NM_019710.1	NM_019710.1		24061	9790236	NM_019710.1	Smc1a	NP_062684.1	ILMN_1253332	006330102	S	430	ACAAAGTTGTCCAGCTACATGAATACAGTGAAGAGTTAGAGAAGTTGGGC	X	+	148457609-148457658	XqF3	Mus musculus structural maintenance of chromosomes 1A (Smc1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IPI]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SMCB; KIAA0178; mKIAA0178; Smc1; SB1.8; Smc1l1; Smc1alpha; 5830426I24Rik	SMCB; KIAA0178; mKIAA0178; Smc1; SB1.8; Smc1l1; Smc1alpha; 5830426I24Rik
Mus musculus	RefSeq	ILMN_210942	ILMN_210942	SMC1A	NM_019710.1	NM_019710.1		24061	9790236	NM_019710.1	Smc1a	NP_062684.1	ILMN_1220530	000020601	S	324	GCTGCCAACCGAGCCTTTGTCAGCATGGTCTACTCGGAGGAGGGTGCTGA	X	+	148457399-148457448	XqF3	Mus musculus structural maintenance of chromosomes 1A (Smc1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IPI]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SMCB; KIAA0178; mKIAA0178; Smc1; SB1.8; Smc1l1; Smc1alpha; 5830426I24Rik	SMCB; KIAA0178; mKIAA0178; Smc1; SB1.8; Smc1l1; Smc1alpha; 5830426I24Rik
Mus musculus	RefSeq	ILMN_210942	ILMN_210942	SMC1A	NM_019710.1	NM_019710.1		24061	9790236	NM_019710.1	Smc1a	NP_062684.1	ILMN_2952114	003400619	S	3626	CAAGGAACAGTCAACTTGCAACTTCCAGGCCATTGTTATCTCTCTCAAGG	X	+	148495850-148495899	XqF3	Mus musculus structural maintenance of chromosomes 1A (Smc1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IPI]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SMCB; KIAA0178; mKIAA0178; Smc1; SB1.8; Smc1l1; Smc1alpha; 5830426I24Rik	SMCB; KIAA0178; mKIAA0178; Smc1; SB1.8; Smc1l1; Smc1alpha; 5830426I24Rik
Mus musculus	MEEBO	ILMN_187000	ILMN_187000	CPSF6	scl37465.8_156						Cpsf6		ILMN_1244769	001990010	S	8	ACGTGACGGGTTAGGTGGCATTACCTTCACTTGCTGAGACATCTGGGTAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209183	ILMN_209183	APCS	NM_011318.1	NM_011318.1		20219	7363448	NM_011318.1	Apcs	NP_035448.1	ILMN_2896170	002320170	S	615	GCGACAGGAGCAGGATAACTATGGAGGAGGGTTTCAAAGGTCACAGTCCT	1	-	174824400-174824449	1qH3	Mus musculus serum amyloid P-component (Apcs), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Sap	Sap
Mus musculus	Riken	ILMN_206365	ILMN_206365	D430036O16RIK	ri|D430036O16|PX00194F20|AK085103|2188					AK085103	D430036O16Rik		ILMN_1227152	006980195	S	2041	CCTCCCCTTCCTCCTATGCCACACACAACCAGTGCAGCTTTAGGTCTTTG										
Mus musculus	RefSeq	ILMN_194611	ILMN_226395	KPNA6	NM_008468.3	NM_008468.3		16650	142364978	NM_008468.3	Kpna6	NP_032494.2	ILMN_2667404	006960672	S	1618	ATGAGACGCAACAGCAGTTCATCTTCCAGCAGCCTGAGGCCCCCATGGAG	4	-	129331118-129331167	4qD2.2	Mus musculus karyopherin (importin) alpha 6 (Kpna6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	NPI-2; IPOA7; Kpna5	NPI-2; IPOA7; Kpna5
Mus musculus	MEEBO	ILMN_195795	ILMN_195795	E230025E14RIK	scl16387.1.464_13						E230025E14Rik		ILMN_2518785	003420315	S	9	GTGGGACTGCTTATCTTCTTCTTTATGGCGTTGTTGGGGGTGATAGCCAC										
Mus musculus	RefSeq	ILMN_199082	ILMN_199082	LOC327836	XM_284887.2	XM_284887.2			38090800	XM_284887.2	LOC327836		ILMN_1258223	000780639	S	51	CACAGTGTTATCAGGTGGACAGATAAAAGTCGAGGTGGAGGAGGAAGGCG										
Mus musculus	RefSeq	ILMN_213719	ILMN_215923	H2-T10	NM_010395.5	NM_010395.5		15024	86262135	NM_010395.5	H2-T10	NP_034525.2	ILMN_1230878	006590215	S	306	TCCTCAGGGCCGCTGTGGTCTGCGCCCTTCTCCTGCAGCTGGATGCCAGA	17	-	36258329-36258378	17qB1	Mus musculus histocompatibility 2, T region locus 10 (H2-T10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			H-2T10	H-2T10
Mus musculus	RefSeq	ILMN_215923	ILMN_215923	H2-T10	NM_010395.5	NM_010395.5		15024	86262135	NM_010395.5	H2-T10	NP_034525.2	ILMN_2894678	004900722	S	1183	TGTTGCCACGGTTTTTTCCATTTTGCTCATTTGTCTCTGTGTGGCTCGCA	17	-	36257609-36257658	17qB1	Mus musculus histocompatibility 2, T region locus 10 (H2-T10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			H-2T10	H-2T10
Mus musculus	MEEBO	ILMN_193373	ILMN_193373	HMGN1	scl48156.6_198				41406073	NM_008251	Hmgn1		ILMN_2496559	001470601	S	8	GTCCCTGGGAAGAACTTGGTGTTTTCCCAGTATTTGTAGTCCTTGGAGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence IMP]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [evidence IMP]; The repair of UV-induced T-T, C-T, and C-C dimers by the recognition and removal of the damaged DNA strand from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 720] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-C radiation stimulus. UV-C radiation (UV-C light) spans the wavelengths 100 to 290 nm [goid 10225] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized during post-embryonic development. Morphogenesis pertains to the creation of form [goid 48597] [evidence IMP]; Any process that modulates the frequency, rate or extent of epithelial cell proliferation [goid 50678] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]		
Mus musculus	RefSeq	ILMN_219798	ILMN_219798	SYT12	NM_134164.2	NM_134164.2		171180	31543793	NM_134164.2	Syt12	NP_598925.1	ILMN_2943868	004780538	S	3100	GCCCCCAGACTCTTTGTAATCCAATGGCTTTGCAGGGAAGACCACACCCC	19	-	4446035-4446084	19qA	Mus musculus synaptotagmin XII (Syt12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223609	ILMN_223609	LRRC8D	NM_178701.2	NM_178701.2		231549	31982310	NM_178701.2	Lrrc8d	NP_848816.2	ILMN_2766455	003830021	S	3658	CAGTCTTGGCGGCCTGGAATGAAGTAGAGCGTGTGGTGTGTCAAGACTCT	5	+	106243994-106244043	5qE5	Mus musculus leucine rich repeat containing 8D (Lrrc8d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4930525N13Rik; Lrrc5; A930019F03	4930525N13Rik; Lrrc5; A930019F03
Mus musculus	RefSeq	ILMN_203214	ILMN_247532	C030030A07RIK	NM_001039558.2	NM_001039558.2		654818	112363104	NM_001039558.2	C030030A07Rik	NP_001034647.2	ILMN_2555588	000770112	S	1301	CTGCCACCCGGAAATGAAGGCAGAGCAACCTCAACAACATTATGTTCCAG	6	-	136779153-136779202	6qG1	Mus musculus RIKEN cDNA C030030A07 gene (C030030A07Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_247532	ILMN_247532	C030030A07RIK	NM_001039558.2	NM_001039558.2		654818	112363104	NM_001039558.2	C030030A07Rik	NP_001034647.2	ILMN_2801171	007560575	S	1667	GCAGCTCCCTCTGCCCCATAAAGCATTTGCAGACCTATGTTAATTGCCTC	6	-	136778787-136778836	6qG1	Mus musculus RIKEN cDNA C030030A07 gene (C030030A07Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_194011	ILMN_236870	ODF2	NM_013615.2	NM_013615.2		18286	118129797	NM_013615.2	Odf2	NP_038643.1	ILMN_1245003	005870612	S	1985	AGACGAGATGAACAAAGAGATCGAGGCGGCCCGTCGGCAGTTCCAGTCAC	2	+	29776601-29776628:29777733-29777754	2qB	Mus musculus outer dense fiber of sperm tails 2 (Odf2), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]	MMTEST29; AI848335	MMTEST29; AI848335
Mus musculus	RefSeq	ILMN_194011	ILMN_236870	ODF2	NM_013615.2	NM_013615.2		18286	118129797	NM_013615.2	Odf2	NP_038643.1	ILMN_1226849	006350403	S	1941	GCTGCACAGCTAGAGCGCTGCGACAAAGAGAACAAGATGCTTAAAGACGA	2	+	29776557-29776606	2qB	Mus musculus outer dense fiber of sperm tails 2 (Odf2), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]	MMTEST29; AI848335	MMTEST29; AI848335
Mus musculus	RefSeq	ILMN_194011	ILMN_236870	ODF2	NM_013615.2	NM_013615.2		18286	118129797	NM_013615.2	Odf2	NP_038643.1	ILMN_2659351	002570468	S	2214	GGGGCCCGCTTACCGAGATGAGCTGCACGCCCCCCAAGGGAGGACCACTT	2	+	29777934-29777954:29777955-29777983	2qB	Mus musculus outer dense fiber of sperm tails 2 (Odf2), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]	MMTEST29; AI848335	MMTEST29; AI848335
Mus musculus	RefSeq	ILMN_194011	ILMN_236870	ODF2	NM_013615.2	NM_013615.2		18286	118129797	NM_013615.2	Odf2	NP_038643.1	ILMN_1220255	001010598	S	268	GCAGAGCCTGCCGACCCAATTGCCCATCTTTGCGGCTTTGATGCTTAACC	2	+	29746441-29746490	2qB	Mus musculus outer dense fiber of sperm tails 2 (Odf2), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]	MMTEST29; AI848335	MMTEST29; AI848335
Mus musculus	Riken	ILMN_202468	ILMN_202468	PCM1	ri|5830432F13|PX00039C01|AK017964|1611					AK017964	Pcm1		ILMN_1231922	003870661	S	1483	TCTAAGCCTACTATTGAAAAAGGAGATGTTCTGTCAATGAATTCAGGTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]				
Mus musculus	Riken	ILMN_201652	ILMN_201652	SYNC	ri|1110057H03|R000018N17|AK004279|1050					AK004279	Sync		ILMN_1237207	004760743	S	981	CCTCTTACCCCATTCTGAGTAGTTACACTGCCTGCCTCTGGAGGGTGGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence ISS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins [goid 45103] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209818	ILMN_209818	NMT1	NM_008707.3	NM_008707.3		18107	118130678	NM_008707.3	Nmt1	NP_032733.1	ILMN_2599487	000360050	S	1665	GATGGCGTAGGCTGCGTGATGTCACCTTTAGCCATGTTTCTGGTCTCCCT	11	+	102927246-102927295	11qE1	Mus musculus N-myristoyltransferase 1 (Nmt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The myristoylation of the N-terminal glycine of proteins to form the derivative N-myristoyl-glycine [goid 18008] [evidence ISA]; The covalent or non-covalent attachment of a myristoyl moiety to the N-terminal amino acid residue of a protein [goid 6499] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide [goid 4379] [evidence TAS]; Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide [goid 4379] [evidence ISA]; Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide [goid 4379] [evidence IMP]	AW536594	AW536594
Mus musculus	RefSeq	ILMN_220658	ILMN_220658	OLFR1310	NM_146449.1	NM_146449.1		258441	33238987	NM_146449.1	Olfr1310	NP_666660.1	ILMN_2724923	004570026	S	739	GTAGTTTTGTTCTTTGGACCCTTAATCTTCTTCTATACATGGCCATTTCC	2	-	111848553-111848602	2qE3	Mus musculus olfactory receptor 1310 (Olfr1310), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR245-3	MOR245-3
Mus musculus	RefSeq	ILMN_217920	ILMN_217920	E230019M04RIK	NM_177921.3	NM_177921.3		331537	142368472	NM_177921.3	E230019M04Rik	NP_808589.1	ILMN_2689357	000770026	S	1449	GTTGTAATTTGATATCATTGTATAACTGTGAAATTGACTGGGAGTAAATT	X	+	136641276-136641325	XqF1	Mus musculus RIKEN cDNA E230019M04 gene (E230019M04Rik), mRNA.				RP23-351A10.3	RP23-351A10.3
Mus musculus	RefSeq	ILMN_217080	ILMN_217080	CCDC132	NM_024260.3	NM_024260.3		73288	62751931	NM_024260.3	Ccdc132	NP_077222.3	ILMN_2908874	001010091	S	3030	CCTCGGGGACATTGATCTTCTTTCGGCCTGTACGACATGAAAGGCAGTTC	6	+	3552796-3552845	6qA1	Mus musculus coiled-coil domain containing 132 (Ccdc132), mRNA.				8430415E05Rik; C87205; mKIAA1861; 1700034M03Rik; BLM	8430415E05Rik; C87205; mKIAA1861; 1700034M03Rik; BLM
Mus musculus	RefSeq	ILMN_189373	ILMN_250240	PDE3A	NM_018779.1	NM_018779.1		54611	9055303	NM_018779.1	Pde3a	NP_061249.1	ILMN_2629556	004070168	S	3833	GATTACCAGAAGATTGGCAAATGGCTTAAGTGTTTGGGGGAATTCTTCAC	6	+	141447500-141447549	6qG2	Mus musculus phosphodiesterase 3A, cGMP inhibited (Pde3a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that modulates the frequency, rate or extent of meiosis, the process by which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes [goid 40020] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence IDA]	A930022O17Rik; C87899	A930022O17Rik; C87899
Mus musculus	MEEBO	ILMN_195900	ILMN_195900	FIN14	scl28579.2_420						Fin14		ILMN_2519780	005690189	S	7	CTGCAAAGTCTCCTTTGTTGTTGTCAATTGTGGTTTACTTTTAGAGGTGA										
Mus musculus	Riken	ILMN_202393	ILMN_202393	4930550L21RIK	ri|4930550L21|PX00035E20|AK016089|1315					AK016089	4930550L21Rik		ILMN_1253111	006660609	S	983	GGCTCATACCTGCATACGGAACAGCCCACTCTACTGAGCATGGAGAATCC										
Mus musculus	RefSeq	ILMN_248635	ILMN_248635	CABYR	NM_001042419.1	NM_001042419.1		71132	109255221	NM_001042419.1	Cabyr	NP_001035884.1	ILMN_3157530	004880224	A	479	AAGGAGCTCGGGGTCCCTCTGACAAACCGACTACTCCTAAGACCGACTAC	18	+	12909373-12909422	18qA1	Mus musculus calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) (Cabyr), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any constituent part of a microtubule-based flagellum, a long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 44442] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]	1700016C01Rik; FSP-2; 4933421A18Rik; MGC130218; CBP86; MGC130217	1700016C01Rik; FSP-2; 4933421A18Rik; MGC130218; CBP86; MGC130217
Mus musculus	RefSeq	ILMN_214567	ILMN_214567	ADAM32	NM_153397.1	NM_153397.1		353188	23510258	NM_153397.1	Adam32	NP_700446.1	ILMN_2649346	002140653	S	2367	GAAGAGTCCACGTTCTTCCCTTGGTCACAGCTAAAAGGAGCCAATAAACC	8	-	25946628-25946677	8qA2	Mus musculus a disintegrin and metallopeptidase domain 32 (Adam32), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_223388	ILMN_223388	5830404H04RIK	NM_174847.1	NM_174847.1		207781	30424670	NM_174847.1	5830404H04Rik	NP_777272.1	ILMN_2944272	005690373	S	2777	GAGGTGTCCCTCTGGGCTGTTGCTATGAGCAGGATGGGCTACCTCACCTA	16	-	98080506-98080555	16qC4	Mus musculus RIKEN cDNA 5830404H04 gene (5830404H04Rik), mRNA.				mKIAA4045; AI314146; 5730563M15; AI449533; BF168443; KIAA4045	mKIAA4045; AI314146; 5730563M15; AI449533; BF168443; KIAA4045
Mus musculus	RefSeq	ILMN_223388	ILMN_223388	5830404H04RIK	NM_174847.1	NM_174847.1		207781	30424670	NM_174847.1	5830404H04Rik	NP_777272.1	ILMN_1251531	000270433	S	2880	GACCCATGGGAAAAAAATAGGAAAAGATGTGCTTTGACAAGTGTGAGGTA	16	-	98080403-98080452	16qC4	Mus musculus RIKEN cDNA 5830404H04 gene (5830404H04Rik), mRNA.				mKIAA4045; AI314146; 5730563M15; AI449533; BF168443; KIAA4045	mKIAA4045; AI314146; 5730563M15; AI449533; BF168443; KIAA4045
Mus musculus	RefSeq	ILMN_213562	ILMN_213562	PRDX2	NM_011563.4	NM_011563.4		21672	148747557	NM_011563.4	Prdx2	NP_035693.3	ILMN_2773554	004780523	S	524	AAGGGTGTCCTTCGCCAGATCACAGTCAATGACCTACCTGTGGGACGCTC				8qC3	Mus musculus peroxiredoxin 2 (Prdx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions involving hydrogen peroxide [goid 10310] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling in response to detection of lipopolysaccharide [goid 31665] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 10671] [evidence IMP]; A phase of elevated metabolic activity, during which oxygen consumption increases following a stimulus during an acute inflammatory response; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals, resulting in an increase in their intracellular or extracellular levels [goid 2536] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell differentiation [goid 45581] [evidence IMP]; The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 42743] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence TAS]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence TAS]; Catalysis of the reaction: thioredoxin + H2O2 = thioredoxin disulfide + H2O [goid 8379] [evidence TAS]; Catalysis of the reaction: thioredoxin + H2O2 = thioredoxin disulfide + H2O [goid 8379] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	Band-8; TPx-B; PrxII; TR; TSA; PRP; NkefB; TDX1; Tdpx1; Torin; AL022839; TPx	Band-8; TPx-B; PrxII; TR; TSA; PRP; NkefB; TDX1; Tdpx1; Torin; AL022839; TPx
Mus musculus	RefSeq	ILMN_194857	ILMN_194857	VPS24	NM_025783.3	NM_025783.3		66700	142368166	NM_025783.3	Vps24	NP_080059.2	ILMN_2510260	005690537	S	2242	GGCTTTGGCAGAATTTGTCATGAGGGATTTGTGTTGAAGTACCCTGGGCA	6	+	71531218-71531267	6qC1	Mus musculus vacuolar protein sorting 24 (yeast) (Vps24), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		4921505F14Rik; CGI-49; NEDF; 25.1; D6Ertd286e; 9130011K15Rik	4921505F14Rik; CGI-49; NEDF; 25.1; D6Ertd286e; 9130011K15Rik
Mus musculus	RefSeq	ILMN_211435	ILMN_211435	CTSF	NM_019861.1	NM_019861.1		56464	9845245	NM_019861.1	Ctsf	NP_063914.1	ILMN_2615879	005910452	S	1522	GAACTGAGAGTTGCTGGCTCAGGACCTATGTTGTCACAGTGGCCCCTTCC	19	+	4860459-4860465:4860466-4860508	19qA	Mus musculus cathepsin F (Ctsf), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	AI481912	AI481912
Mus musculus	RefSeq	ILMN_246125	ILMN_246125	RING1	NM_009066.2	NM_009066.2		19763	31982045	NM_009066.2	Ring1	NP_033092.2	ILMN_2932539	007210221	S	1568	TGGACAGCACGGGCCCTGTACCCACTACTGCCTTTTCTATAGACCCTAGG	17	-	34159479-34159528	17qB1	Mus musculus ring finger protein 1 (Ring1), mRNA.	A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]; A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IDA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IGI]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IDA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MGC91250; Ring1A	MGC91250; Ring1A
Mus musculus	RefSeq	ILMN_212513	ILMN_212513	CD163	NM_053094.1	NM_053094.1		93671	16716384	NM_053094.1	Cd163	NP_444324.1	ILMN_2627340	007380100	S	3847	CGTTTTTAGGGTTTCGTGAATATAAAATAATGTCTTTTCGGTTGGCATGC	6	+	124279988-124280037	6qF2	Mus musculus CD163 antigen (Cd163), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence ISO]	CD163v3; CD163v2	CD163v3; CD163v2
Mus musculus	RefSeq	ILMN_212513	ILMN_212513	CD163	NM_053094.1	NM_053094.1		93671	16716384	NM_053094.1	Cd163	NP_444324.1	ILMN_2964560	001230161	S	4309	GAGGTGAAAAGCTAGTTGGGAACTTATGTGATCACAGTGCATCATGTCCA	6	+	124280450-124280499	6qF2	Mus musculus CD163 antigen (Cd163), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence ISO]	CD163v3; CD163v2	CD163v3; CD163v2
Mus musculus	RefSeq	ILMN_209020	ILMN_209020	COMTD1	NM_026965.2	NM_026965.2		69156	142371609	NM_026965.2	Comtd1	NP_081241.1	ILMN_2591800	000020605	S	2143	CACCCCTGCATCTCCCTTCATCATCCATGGGTTAACAGTGATTCACTCTA	14	-	22665131-22665180	14qA3	Mus musculus catechol-O-methyltransferase domain containing 1 (Comtd1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule [goid 8171] [evidence IEA]	MT773; 1810030M08Rik	MT773; 1810030M08Rik
Mus musculus	RefSeq	ILMN_210095	ILMN_247200	SAFB2	NM_001029979.2	NM_001029979.2		224902	153945865	NM_001029979.2	Safb2	NP_001025150.2	ILMN_2609735	001410040	S	1099	TGGAGGTACTCGGCACAGGCGGAAGCGCAAGCGAAGGCGGAAGCATCAGG				17qD	Mus musculus scaffold attachment factor B2 (Safb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AA389433; mKIAA0138; AI255170	AA389433; mKIAA0138; AI255170
Mus musculus	RefSeq	ILMN_185665	ILMN_185665	XPNPEP1	NM_133216.2	NM_133216.2		170750	42476273	NM_133216.2	Xpnpep1	NP_573479.2	ILMN_2428963	001510605	S	19	AGGAGGACTGGCTGGTGAGTGTGCTTCCAGAAGGATCCAGGGTTGGTGTG	19	-	53106548-53106587:53113004-53113013	19qD2	Mus musculus X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (Xpnpep1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	D230045I08Rik	D230045I08Rik
Mus musculus	RefSeq	ILMN_185665	ILMN_185665	XPNPEP1	NM_133216.2	NM_133216.2		170750	42476273	NM_133216.2	Xpnpep1	NP_573479.2	ILMN_1253317	000540048	S	2329	GGTGCTAGGACCTCAGTCACGGTCACCTTGATGTTCATGAGACCCTCCTA	19	-	53065700-53065749	19qD2	Mus musculus X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (Xpnpep1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	D230045I08Rik	D230045I08Rik
Mus musculus	RefSeq	ILMN_185665	ILMN_185665	XPNPEP1	NM_133216.2	NM_133216.2		170750	42476273	NM_133216.2	Xpnpep1	NP_573479.2	ILMN_2428961	002120296	S	432	TCAGGAGGACTGGCTGGTGAGTGTGCTTCCAGAAGGATCCAGGGTTGGTG	19	-	53086702-53086751	19qD2	Mus musculus X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (Xpnpep1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	D230045I08Rik	D230045I08Rik
Mus musculus	RefSeq	ILMN_185665	ILMN_185665	XPNPEP1	NM_133216.2	NM_133216.2		170750	42476273	NM_133216.2	Xpnpep1	NP_573479.2	ILMN_1241800	000380411	S	49	CAGCTGAGAAATTTAAGAATAATTGAACCTAACGAGGTGACACCCTCAGG	19	-	53106518-53106567	19qD2	Mus musculus X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (Xpnpep1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	D230045I08Rik	D230045I08Rik
Mus musculus	RefSeq	ILMN_191598	ILMN_319123	PAPPA2	XM_001472777.1	XM_001472777.1		23850	149245230	XM_001472777.1	Pappa2	XP_001472827.1	ILMN_2480498	006250731	S	8281	GGCAGCCTTCAATCACAGATACAGAAAAGAGATCAGCAGGGGCAAAGAGC	1	-	160642116-160642165	1qH1	PREDICTED: Mus musculus pappalysin 2 (Pappa2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISO]		
Mus musculus	RefSeq	ILMN_192356	ILMN_319123	PAPPA2	XM_001472777.1	XM_001472777.1		23850	149245230	XM_001472777.1	Pappa2	XP_001472827.1	ILMN_1229663	002850681	S	4063	GCAGTGGCTCTAAGGACATCCTCCCAGACCAGTTCTTCAGCTCCCAGTAA	1	-	160744503-160744552	1qH1	PREDICTED: Mus musculus pappalysin 2 (Pappa2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISO]		
Mus musculus	RefSeq	ILMN_243733	ILMN_243733	EG622976	NM_001037917.1	NM_001037917.1		622976	85702299	NM_001037917.1	EG622976	NP_001033006.1	ILMN_2804283	001410750	S	887	TCAAATCTCTCAGGAGCAGAACATAGAGGCATCCAAAGCCCGAGAAGCCC	X	+	106393903-106393952	XqD	Mus musculus predicted gene, EG622976 (EG622976), mRNA.				RP23-252O5.3	RP23-252O5.3
Mus musculus	RefSeq	ILMN_243733	ILMN_243733	EG622976	NM_001037917.1	NM_001037917.1		622976	85702299	NM_001037917.1	EG622976	NP_001033006.1	ILMN_2804287	005820730	S	2391	GAATGAAATATATGTAGACAGCATTCTTGTGGGTAATTTTCTTAGGCACA	X	+	106395407-106395456	XqD	Mus musculus predicted gene, EG622976 (EG622976), mRNA.				RP23-252O5.3	RP23-252O5.3
Mus musculus	Riken	ILMN_207367	ILMN_207367	C130021C16RIK	ri|C130021C16|PX00666K21|AK081492|2319					AK081492	C130021C16Rik		ILMN_1239610	003390196	S	1744	GCCAGAACTCAGTGTAAGGGTGGGTGATGTGGAGGAGCTAAACCGGGGAA										
Mus musculus	RefSeq	ILMN_198413	ILMN_315646	EG633120	XR_031485.1	XR_031485.1		633120	149270297	XR_031485.1	EG633120		ILMN_1213803	004040500	S	1141	GCCAAATCAGTGCTGGCTATGCTCCTGTTCTGGATTGTCACATAGCATGC				19qA	PREDICTED: Mus musculus predicted gene, EG633120 (EG633120), misc RNA.					
Mus musculus	Riken	ILMN_203138	ILMN_203138	SLC37A1	ri|4732478E01|PX00052A23|AK028984|2945					AK028984	Slc37a1		ILMN_1257444	006770450	S	2827	CTGTGCAATCCAGCAGGAGCCTAGACCCCCATACAAGATACATCCATTGC										
Mus musculus	RefSeq	ILMN_216201	ILMN_216201	SELP	NM_011347.1	NM_011347.1		20344	6755455	NM_011347.1	Selp	NP_035477.1	ILMN_1236889	004290465	S	2321	CCCGGTCTGCCAATGTCTCATTCGATTTCTCAGGATTCCACATGCAAGTG	1	+	166079154-166079203	1qH2.2	Mus musculus selectin, platelet (Selp), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; The lipid bilayer surrounding the platelet alpha granule [goid 31092] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; Transient adhesive interactions between leukocytes and endothelial cells lining blood vessels mediated primarily by selectins and which are typically the first step in cellular extravasation [goid 50901] [evidence IMP]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IDA]; Interacting selectively with sialic acid, any of a variety of N- or O- substituted derivatives of neuraminic acid, a nine carbon monosaccharide. Sialic acids often occur in polysaccharides, glycoproteins, and glycolipids in animals and bacteria [goid 33691] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IDA]	CD62P; MGC129337; PADGEM; MGC129336; P-selectin; Grmp	CD62P; MGC129337; PADGEM; MGC129336; P-selectin; Grmp
Mus musculus	RefSeq	ILMN_251235	ILMN_251235	TPST2	NM_009419.2	NM_009419.2		22022	31981951	NM_009419.2	Tpst2	NP_033445.1	ILMN_2843782	004640324	S	1597	TCCCTAATGGACAGACCCCTTGGTGACCTCATCTCCTGGGACAAGACCGG	5	+	112744178-112744227	5qF	Mus musculus protein-tyrosine sulfotransferase 2 (Tpst2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + protein tyrosine = adenosine 3',5'-bisphosphate + protein tyrosine-O-sulfate [goid 8476] [evidence IEA]	AI448750; D5Ucla3	AI448750; D5Ucla3
Mus musculus	RefSeq	ILMN_199899	ILMN_199899	LOC381559	XM_358616.1	XM_358616.1			38078832	XM_358616.1	LOC381559		ILMN_1242224	004640280	S	653	ACCGCCGCTGTCCCTACCAGGGTCCCCAAGACAACAGATGCCATGAGAAA										
Mus musculus	RefSeq	ILMN_199129	ILMN_232259	IRGB10	XM_905096.3	XM_905096.3		631323	149261922	XM_905096.3	Irgb10	XP_910189.2	ILMN_2534151	001400220	S	1189	GATCCTGAGCCACTACAGGGCTTGCTTTGGGCTAGATGATGAGTCGCTGG	11	+	58002187-58002236	11qB1.3	PREDICTED: Mus musculus interferon-gamma-inducible p47 GTPase (Irgb10), mRNA.					
Mus musculus	RefSeq	ILMN_214569	ILMN_214569	PRH1	NM_011174.2	NM_011174.2		19131	13928681	NM_011174.2	Prh1	NP_035304.2	ILMN_2649373	006480170	S	722	AAACACCTCCTCTGGCTGGAAACACACAAGGCCCACCACAAGGCAGACCC	6	+	132522355-132522404	6qG1	Mus musculus proline rich protein HaeIII subfamily 1 (Prh1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			A-type; Prp; MP2	A-type; Prp; MP2
Mus musculus	MEEBO	ILMN_192947	ILMN_192947	9628654_5	9628654_5						9628654_5		ILMN_1227465	004850274	S	16	ATTGACTACCCGGCTCGGGGGTCTTTCATTTGGGGGCTCGTCCGGGATTT										
Mus musculus	RefSeq	ILMN_200292	ILMN_200292	LOC386154	XM_359095.1	XM_359095.1			38081240	XM_359095.1	LOC386154		ILMN_1259352	006200725	S	600	ATTCCAACCAAGCCATGCCCCTGCAAGTTATGCTGCTGCAATGGTGGTAC										
Mus musculus	MEEBO	ILMN_224089	ILMN_224089	CRYGN	scl26794.4.1_114				23346484	NM_153076	Crygn		ILMN_2774572	003940347	S	533	GGGTGCTCAACTTCTTCTAGTCCCAACTGCGTACGTGCGACCCACGGAGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_198536	ILMN_198536	LOC245350	XM_141626.2	XM_141626.2			38086075	XM_141626.2	LOC245350		ILMN_2532035	004880221	S	332	GCCAAAGGCAAGAGCATTTGAATGGTACCGTGTCTGGCTCGGTGCATGCT										
Mus musculus	RefSeq	ILMN_205662	ILMN_231248	HERC1	XM_985533.1	XM_985533.1		235439	94387329	XM_985533.1	Herc1	XP_990627.1	ILMN_2574297	000070445	S	1848	CCCTAGAGATACAATTTCTGCTCTTACTAAGTTCACATCGTGCTAGGGTG				9qC	PREDICTED: Mus musculus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1, transcript variant 6 (Herc1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_203305	ILMN_203305	IGF2BP3	ri|4932441J09|PX00019A23|AK030096|4154					AK030096	Igf2bp3		ILMN_1245610	004050132	S	4043	CCATGCCCCATCCTCGGATTCTTGCATTAAAACAAAGGTTGCCAGGTGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214095	ILMN_214095	A630023P12RIK	scl27439.5.1_39	NM_173766.2			31343392	NM_173766.2	A630023P12Rik		ILMN_2644193	003310131	S	890	TGCAGGACGTGAAGCTTGGGAAGTCAGATCACGCTCCAAGAATGGAGTCG										
Mus musculus	RefSeq	ILMN_199193	ILMN_199193	LOC194905	XM_110911.2	XM_110911.2			25058282	XM_110911.2	LOC194905		ILMN_1218386	001850500	S	353	GGGTGAAAATACATCGCAGGGTTCAGATGAGGACAGGTGTTGCTTGTTCT										
Mus musculus	Riken	ILMN_203969	ILMN_203969	AOC3	ri|A530021C07|PX00140G10|AK040729|1590					AK040729	Aoc3		ILMN_1235989	005390142	S	1472	GACTCAGACACCCACTGCGGGGCATACAAGAGAAGCCAGATACCTCTCCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds [goid 48038] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]		
Mus musculus	RefSeq	ILMN_259233	ILMN_259233	4930573I19RIK	NM_001081057.1	NM_001081057.1		104859	124486689	NM_001081057.1	4930573I19Rik	NP_001074526.1	ILMN_3028247	004050754	I	1	GGGCTGCCGCGGGAGTGTTGTGGGAGCTAGTCCTAACTGAAGTGCATTTG	12	+	112127522-112127536:112133685-112133719	12qF1	Mus musculus RIKEN cDNA 4930573I19 gene (4930573I19Rik), mRNA.				mKIAA0297; AI604920	mKIAA0297; AI604920
Mus musculus	RefSeq	ILMN_259233	ILMN_259233	4930573I19RIK	NM_001081057.1	NM_001081057.1		104859	124486689	NM_001081057.1	4930573I19Rik	NP_001074526.1	ILMN_3101400	002340735	A	7522	GGGGTCCCACAGGCAATCTTAGGGCGGTGTGAAACTCTTCTGGCCTATCA	12	+	112210344-112210393	12qF1	Mus musculus RIKEN cDNA 4930573I19 gene (4930573I19Rik), mRNA.				mKIAA0297; AI604920	mKIAA0297; AI604920
Mus musculus	RefSeq	ILMN_223005	ILMN_259233	4930573I19RIK	NM_001081057.1	NM_001081057.1		104859	124486689	NM_001081057.1	4930573I19Rik	NP_001074526.1	ILMN_1237787	003870195	S	7593	GCACTGCATGTGGGGGGTACCGTGTGTACATCACTCTTTAGGAGGGTCAG	12	+	112210415-112210464	12qF1	Mus musculus RIKEN cDNA 4930573I19 gene (4930573I19Rik), mRNA.				mKIAA0297; AI604920	mKIAA0297; AI604920
Mus musculus	RefSeq	ILMN_196099	ILMN_248072	4930447A16RIK	XM_911779.2	XM_911779.2		74892	94398582	XM_911779.2	4930447A16Rik	XP_916872.1	ILMN_2521618	004050465	S	522	CTGAAGTATAGACATAAAAGCTTTGTTTGTTTGAGAATTTGCTTAAAATA				15qB3.1	PREDICTED: Mus musculus RIKEN cDNA 4930447A16 gene (4930447A16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210122	ILMN_210122	SNX5	NM_024225.4	NM_024225.4		69178	146141133	NM_024225.4	Snx5	NP_077187.1	ILMN_2602462	001580707	S	1202	GAAGAGAGTGGCAGCATTTCGAAAGAACCTAATCGAAATGTCTGAACTGG				2qG1	Mus musculus sorting nexin 5 (Snx5), mRNA. XM_001004302		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	0910001N05Rik; 1810032P22Rik; D2Ertd52e; AU019504	0910001N05Rik; 1810032P22Rik; D2Ertd52e; AU019504
Mus musculus	RefSeq	ILMN_210122	ILMN_210122	SNX5	NM_024225.4	NM_024225.4		69178	146141133	NM_024225.4	Snx5	NP_077187.1	ILMN_2706101	007380142	S	1788	GGTAACAAGCAAGAAGATCTCATATGTCTTTTTACATCCTTTACAGCTCC				2qG1	Mus musculus sorting nexin 5 (Snx5), mRNA. XM_001004302		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	0910001N05Rik; 1810032P22Rik; D2Ertd52e; AU019504	0910001N05Rik; 1810032P22Rik; D2Ertd52e; AU019504
Mus musculus	MEEBO	ILMN_220277	ILMN_220277	AW124722	scl47648.13.1_3	XM_139515.3			38077102	XM_139515.3	AW124722		ILMN_2720047	004480184	S	1337	CCAGCTGCTGATTCACGCGGCCATGACCTGCACCTCCAGTGTACACAAGA										
Mus musculus	RefSeq	ILMN_209752	ILMN_209752	GLP2R	NM_175681.2	NM_175681.2		93896	30023839	NM_175681.2	Glp2r	NP_783612.2	ILMN_3008399	002810564	S	4173	CTGCCTGGTTGAGATATGTGTCCATGGTTGGGTATACTGCCTGGTTGAGA	11	-	67520582-67520631	11qB3	Mus musculus glucagon-like peptide 2 receptor (Glp2r), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	GLP-2; 9530092J08Rik	GLP-2; 9530092J08Rik
Mus musculus	RefSeq	ILMN_202399	ILMN_315500	2900097C17RIK	XM_001480665.1	XM_001480665.1		347740	149250080	XM_001480665.1	2900097C17Rik	XP_001480715.1	ILMN_2549315	003060152	S	1226	ATGCCAGGTTTTGGGGGTAATGTCTTTCTAGCTGCTCTGAAGTGCCTGCC	2	-	156217593-156217642	2qH1	PREDICTED: Mus musculus RIKEN cDNA 2900097C17 gene (2900097C17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210980	ILMN_315500	2900097C17RIK	XM_001480665.1	XM_001480665.1		347740	149250080	XM_001480665.1	2900097C17Rik	XP_001480715.1	ILMN_1227592	004290437	S	2741	AGTTGTGAAAGTGTATCATCCAAGTGACGAGTGACATAGGCACCCGTGCC	2	-	156216078-156216127	2qH1	PREDICTED: Mus musculus RIKEN cDNA 2900097C17 gene (2900097C17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214905	ILMN_214905	BMPR1A	NM_009758.4	NM_009758.4		12166	133891829	NM_009758.4	Bmpr1a	NP_033888.2	ILMN_2653312	000460047	S	1900	GCTAATGTCAGAATGTTGGGCCCATAATCCAGCCTCCAGACTCACAGCTT	14	-	35227785-35227834	14qB	Mus musculus bone morphogenetic protein receptor, type 1A (Bmpr1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50768] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The establishment, maintenance and elaboration of the dorsal/ventral axis [goid 9950] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IMP]; The process whose specific outcome is the progression of the mesendoderm over time, from its formation to the mature structure. In animal embryos, mesendoderm development gives rise to both mesoderm and endoderm tissues [goid 48382] [evidence IMP]; The process by which the Mullerian ducts, primordia of the oviducts, uterus and upper vagina, undergo regression in male embryos [goid 1880] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Bmpr; 1110037I22Rik; ALK3; BMPR-IA; AU045487	Bmpr; 1110037I22Rik; ALK3; BMPR-IA; AU045487
Mus musculus	RefSeq	ILMN_214905	ILMN_214905	BMPR1A	NM_009758.4	NM_009758.4		12166	133891829	NM_009758.4	Bmpr1a	NP_033888.2	ILMN_1251119	006620630	S	5135	CTTTTAGGTTGTGCTCTGTTCTTTCCTTTCAGTGGAATTATTTAAGCTCT	14	-	35224550-35224599	14qB	Mus musculus bone morphogenetic protein receptor, type 1A (Bmpr1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50768] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The establishment, maintenance and elaboration of the dorsal/ventral axis [goid 9950] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IMP]; The process whose specific outcome is the progression of the mesendoderm over time, from its formation to the mature structure. In animal embryos, mesendoderm development gives rise to both mesoderm and endoderm tissues [goid 48382] [evidence IMP]; The process by which the Mullerian ducts, primordia of the oviducts, uterus and upper vagina, undergo regression in male embryos [goid 1880] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Bmpr; 1110037I22Rik; ALK3; BMPR-IA; AU045487	Bmpr; 1110037I22Rik; ALK3; BMPR-IA; AU045487
Mus musculus	Riken	ILMN_203329	ILMN_203329	DAZL	ri|8030492G05|PX00104G13|AK033316|1342					AK033316	Dazl		ILMN_1243458	005670066	S	1139	GAACCTAGTGCATGTTTGTGCAGGCCCCGTGTATGCTGCATCCATCCCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]; Any constituent part of a cell, the basic structural and functional unit of all organisms [goid 44464] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of meiosis [goid 45836] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of translational initiation [goid 45948] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with the 3' untranslated region of an mRNA molecule [goid 3730] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186972	ILMN_186972	TPRA40	scl29766.14.1_89	NM_011906.1			6755858	NM_011906.1	Tpra40		ILMN_2440066	006130193	S	10	CTCTGCTGGGGTGGCCTACTTAGATGACATTGCCTCCATGCCCTGCCACA										
Mus musculus	RefSeq	ILMN_222509	ILMN_222509	MFSD7C	NM_145447.2	NM_145447.2		217721	118130135	NM_145447.2	Mfsd7c	NP_663422.1	ILMN_1248190	000380132	S	3229	GCCGCCTGGTGGAGGGAGTGTTAGGGATGGAAGAGATGCCTTACTTTCTG	12	+	87154329-87154378	12qD2	Mus musculus major facilitator superfamily domain containing 7C (Mfsd7c), mRNA.				MGC19050; CCT	MGC19050; CCT
Mus musculus	Riken	ILMN_206258	ILMN_206258	C230091E03RIK	ri|C230091E03|PX00177M23|AK082704|2162					AK082704	C230091E03Rik		ILMN_2578773	006280017	S	1711	CCCAGTAGCAGGAAACCTCCAGTCACAGCCAGTTAAGAATGGAACTGGTC										
Mus musculus	RefSeq	ILMN_214816	ILMN_214816	ADH1	NM_007409.2	NM_007409.2		11522	21735490	NM_007409.2	Adh1	NP_031435.1	ILMN_1258501	004850521	S	358	CCCCTCAGTGTGGAGAATGCAGGATTTGCAAGCACCCGGAAAGCAACTTT	3	+	137945424-137945473	3qG3	Mus musculus alcohol dehydrogenase 1 (class I) (Adh1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus [goid 48545] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus [goid 33574] [evidence IDA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IMP]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IGI]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IGI]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; A change in the behavior of an organism as a result of an ethanol stimulus [goid 48149] [evidence IMP]; The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 1523] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation [goid 6068] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation [goid 6068] [evidence IDA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence TAS]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Adh-3e; Adh1-t; Adh1tl; Adh-1e; AI194826; ADH-AA; Adh-1-t; Adh1-e; Adh3-e; Adh-1t; Adh-1	Adh-3e; Adh1-t; Adh1tl; Adh-1e; AI194826; ADH-AA; Adh-1-t; Adh1-e; Adh3-e; Adh-1t; Adh-1
Mus musculus	RefSeq	ILMN_214816	ILMN_214816	ADH1	NM_007409.2	NM_007409.2		11522	21735490	NM_007409.2	Adh1	NP_031435.1	ILMN_2850077	000110458	S	880	TCATCGGCCGCCTTGACACCATGACTTCTGCCCTGCTGAGCTGCCATGCA	3	+	137949894-137949916:137951713-137951739	3qG3	Mus musculus alcohol dehydrogenase 1 (class I) (Adh1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus [goid 48545] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus [goid 33574] [evidence IDA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IMP]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IGI]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IGI]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; A change in the behavior of an organism as a result of an ethanol stimulus [goid 48149] [evidence IMP]; The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 1523] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation [goid 6068] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation [goid 6068] [evidence IDA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence TAS]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Adh-3e; Adh1-t; Adh1tl; Adh-1e; AI194826; ADH-AA; Adh-1-t; Adh1-e; Adh3-e; Adh-1t; Adh-1	Adh-3e; Adh1-t; Adh1tl; Adh-1e; AI194826; ADH-AA; Adh-1-t; Adh1-e; Adh3-e; Adh-1t; Adh-1
Mus musculus	MEEBO	ILMN_195007	ILMN_195007	A230052E19RIK	scl20862.4_81						A230052E19Rik		ILMN_2511703	003830725	S	18	AGATTTCAAGGGGAGCAGATGATAGATACTCTAGGCATTATCTGAGTGGG										
Mus musculus	RefSeq	ILMN_214612	ILMN_214612	OLFR1180	NM_146918.1	NM_146918.1		258920	22129058	NM_146918.1	Olfr1180	NP_667129.1	ILMN_2649883	004180463	S	664	GTTTACCCTGCAGAGAGTCGTTCCAAAGCTCTTTCAACATGTAGTTCTCA	2	-	88252100-88252149	2qD	Mus musculus olfactory receptor 1180 (Olfr1180), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR225-1	MOR225-1
Mus musculus	RefSeq	ILMN_220368	ILMN_220368	ARL11	NM_177337.3	NM_177337.3		219144	42476057	NM_177337.3	Arl11	NP_796311.2	ILMN_2721149	000430717	S	1379	GGAATCCTCCCAGAATTCCCCCTGCTTTCCAACTCCAACTAACTTTTCTC	14	+	61930670-61930719	14qD1	Mus musculus ADP-ribosylation factor-like 11 (Arl11), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	ARLTS1; C730007L20Rik	ARLTS1; C730007L20Rik
Mus musculus	RefSeq	ILMN_231872	ILMN_231872	ZBTB33	NM_001079513.1	NM_001079513.1		56805	118442829	NM_001079513.1	Zbtb33	NP_001072981.1	ILMN_3141993	002360291	A	4780	GCACTGGCTTCTTTACCTCTGTTAGTCATATGAAACCTTGTTCATTTCCC	X	+	35550055-35550104	XqA3.3	Mus musculus zinc finger and BTB domain containing 33 (Zbtb33), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Kaiso; AW260253; E130014G12Rik; Znf-kaiso	Kaiso; AW260253; E130014G12Rik; Znf-kaiso
Mus musculus	RefSeq	ILMN_211145	ILMN_211145	PML	NM_178087.3	NM_178087.3		18854	144227252	NM_178087.3	Pml	NP_835188.1	ILMN_2731835	005220543	S	37	GCTCAGTTTTCTGGCTCAGATCTGAGACCCATTTCCCGCCTTCACAGACC	9	-	58097507-58097556	9qB	Mus musculus promyelocytic leukemia (Pml), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle [goid 6977] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I [goid 45343] [evidence IDA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of PML bodies, a class of nuclear body; they react against SP100 auto-antibodies (PML = promyelocytic leukemia) [goid 30578] [evidence IDA];  [goid 7182] [evidence IMP];  [goid 7184] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Trim19; AI661194; 1200009E24Rik	Trim19; AI661194; 1200009E24Rik
Mus musculus	RefSeq	ILMN_211145	ILMN_211145	PML	NM_178087.3	NM_178087.3		18854	144227252	NM_178087.3	Pml	NP_835188.1	ILMN_1237135	004120142	S	1408	CAGGCTCAGGCCCTAGAGCTGTCTAAGACCCAACCTGTGGCTATGGTAAA	9	-	58078364-58078413	9qB	Mus musculus promyelocytic leukemia (Pml), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle [goid 6977] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I [goid 45343] [evidence IDA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of PML bodies, a class of nuclear body; they react against SP100 auto-antibodies (PML = promyelocytic leukemia) [goid 30578] [evidence IDA];  [goid 7182] [evidence IMP];  [goid 7184] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Trim19; AI661194; 1200009E24Rik	Trim19; AI661194; 1200009E24Rik
Mus musculus	MEEBO	ILMN_195534	ILMN_195534	5830411E10RIK	scl16792.6_45				30844320	NM_028696	5830411E10Rik		ILMN_2516438	002140441	S	5	CTGTGAGTCTATCAGAGGATAAAGCACTATTTGAGGAATCTGAGCCAGTG										
Mus musculus	MEEBO	ILMN_195534	ILMN_195534	5830411E10RIK	scl16792.6_45				30844320	NM_028696	5830411E10Rik		ILMN_1253509	006350730	S	2733	AGGCACAGTTCTGGATTAGAACAAACACATGATCAGACTAGCCTTGTCCC										
Mus musculus	MEEBO	ILMN_215534	ILMN_215534	E030011O05RIK	scl0319859.1_57	NM_177020.2			31342612	NM_177020.2	E030011O05Rik		ILMN_2660715	007510487	S	1710	AGGATCCTAGCACACGGGAACGAAGAGGCTTGATCTCTACCCCGTGGACG										
Mus musculus	RefSeq	ILMN_231865	ILMN_231865	LRRC49	NM_145616.2	NM_145616.2		102747	31981831	NM_145616.2	Lrrc49	NP_663591.2	ILMN_2860501	004890139	S	2610	CCAAGCTCGCTGTGTGCTGATGGGCTAGCATGAGATGCCTCCACCAACCT	9	-	60385345-60385394	9qB	Mus musculus leucine rich repeat containing 49 (Lrrc49), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D430025H09Rik; AI430817; AW050057	D430025H09Rik; AI430817; AW050057
Mus musculus	MEEBO	ILMN_186022	ILMN_186022	TWIST2	scl17644.2.1_29	NM_007855.1			6681176	NM_007855.1	Twist2		ILMN_1230558	006420739	S	17	GCCTTCCTGCCAGTGACTTCTGTGCCCTCATCTCCTCACTGTTGGATTTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]		
Mus musculus	RefSeq	ILMN_220595	ILMN_220595	FERD3L	NM_033522.2	NM_033522.2		114712	31981451	NM_033522.2	Ferd3l	NP_277057.1	ILMN_2724181	002350468	S	728	GCACAATAAGGGTCTAGCTGGGCAGGTTGGGAGTTCCCGGGGTCAAGGAT	12	+	34614017-34614066	12qA3	Mus musculus Fer3-like (Drosophila) (Ferd3l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]	Ntwist; fer3; Nato; N-twist; MGC130442; Mnato3; Nato3	Ntwist; fer3; Nato; N-twist; MGC130442; Mnato3; Nato3
Mus musculus	RefSeq	ILMN_212583	ILMN_212583	WDR45L	NM_025793.1	NM_025793.1		66840	13385263	NM_025793.1	Wdr45l	NP_080069.2	ILMN_2931779	001260341	S	1861	CTCTAGCTCCCGTTGGTGTGGAGGGTACTGCCTTGGCCTGTGGCGTTTGT	11	-	121143688-121143737	11qE2	Mus musculus Wdr45 like (Wdr45l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D16Bwg0193e; AA408735; 0610008N23Rik	D16Bwg0193e; AA408735; 0610008N23Rik
Mus musculus	RefSeq	ILMN_186054	ILMN_249618	SRC	NM_001025395.2	NM_001025395.2		20779	76253930	NM_001025395.2	Src	NP_001020566.1	ILMN_2677529	003120709	S	1767	AAGAGTGCCCTATCCTGGGATGGTGAACCGTGAGGTTCTGGACCAGGTGG	2	+	157295241-157295257:157295489-157295521	2qH1	Mus musculus Rous sarcoma oncogene (Src), transcript variant 2, mRNA.		The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IMP]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IMP]	AW259666; pp60c-src	AW259666; pp60c-src
Mus musculus	RefSeq	ILMN_249618	ILMN_249618	SRC	NM_001025395.2	NM_001025395.2		20779	76253930	NM_001025395.2	Src	NP_001020566.1	ILMN_3148543	006420040	A	3626	TGCCCGACTCCAGCTGCCCAAGGACCTTTGTGTAAGGTGGCCTCAACTGT	2	+	157297331-157297380	2qH1	Mus musculus Rous sarcoma oncogene (Src), transcript variant 2, mRNA.		The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IMP]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IMP]	AW259666; pp60c-src	AW259666; pp60c-src
Mus musculus	RefSeq	ILMN_210752	ILMN_210752	NEK3	NM_011848.1	NM_011848.1		23954	6754819	NM_011848.1	Nek3	NP_035978.1	ILMN_2979307	005870372	S	1750	AGCAGATGCTTCATGCCTTGTGTTCCGACAGAACGGAGATGCCATGCTCG	8	-	23594039-23594088	8qA2	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 3 (Nek3), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210943	ILMN_210943	L7RN6	NM_026304.2	NM_026304.2		67669	142365156	NM_026304.2	l7Rn6	NP_080580.1	ILMN_3162224	003520475	S	570	GCAGTGCTGCCGTGTCCTCCGTTGACTCCTTTACGCAGTTCACACAGAAG	7	-	97068689-97068701:97072074-97072110	7qE1	Mus musculus lethal, Chr 7, Rinchik 6 (l7Rn6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	l(7)6Rn; 0610007P06Rik; 1110002N09Rik	l(7)6Rn; 0610007P06Rik; 1110002N09Rik
Mus musculus	RefSeq	ILMN_215460	ILMN_215460	MMP7	NM_010810.2	NM_010810.2		17393	111955032	NM_010810.2	Mmp7	NP_034940.2	ILMN_2659804	007650735	S	988	CTTGACGGAATGATTCTGACTAATCTCAGGTAACATGAAGTTGCGAGACA				9qA1	Mus musculus matrix metallopeptidase 7 (Mmp7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MAT	MAT
Mus musculus	RefSeq	ILMN_211618	ILMN_211618	PDLIM5	NM_022554.1	NM_022554.1		56376	11990622	NM_022554.1	Pdlim5	NP_072048.1	ILMN_2625458	004070475	S	932	CTGAACACGTTGTATCCTAATTGGTAGCTCACAAATGCAAAGCCAAAGGA	3	-	141966072-141966121	3qH1	Mus musculus PDZ and LIM domain 5 (Pdlim5), transcript variant 3, mRNA.	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI987914; Enh2; 1110001A05Rik; Enh1; LIM; Enh3; Enh; C87059	AI987914; Enh2; 1110001A05Rik; Enh1; LIM; Enh3; Enh; C87059
Mus musculus	RefSeq	ILMN_196249	ILMN_233812	MYCBP	NM_019660.3	NM_019660.3		56309	141801387	NM_019660.3	Mycbp	NP_062634.2	ILMN_1251668	005260608	S	1255	TCTTTATTATCCCTGTGAAGTAGGTAGGGTAGTGAAGGGAAGGTTGGGTG	4	+	123589263-123589312	4qD2.2	Mus musculus c-myc binding protein (Mycbp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	5730488M09Rik; Amy-1; AW742590; AW552132	5730488M09Rik; Amy-1; AW742590; AW552132
Mus musculus	RefSeq	ILMN_223207	ILMN_223207	TAS2R114	NM_207019.1	NM_207019.1		387346	46309590	NM_207019.1	Tas2r114	NP_996902.1	ILMN_1248846	005390541	S	770	GCAACTTGTTATTCATGTTTGGTTTGACAACTGCATTCATCTATCCCGGC	6	-	131639262-131639311	6qF3	Mus musculus taste receptor, type 2, member 114 (Tas2r114), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Tas2r14; mGR14; mt2r46; T2R14	Tas2r14; mGR14; mt2r46; T2R14
Mus musculus	Riken	ILMN_205891	ILMN_205891	A730085F06RIK	ri|A730085F06|PX00152D24|AK043324|2660					AK043324	A730085F06Rik		ILMN_2575986	006130612	S	2099	GGGGTTAGAGCTGAACCATTCTCTCCTTTCATCTCAGACACAGCCCCGGT										
Mus musculus	RefSeq	ILMN_232631	ILMN_232631	KIF24	NM_024241.1	NM_024241.1		109242	68448533	NM_024241.1	Kif24	NP_077203.1	ILMN_2936496	001340010	S	5464	CCACCGCTCCAGGCTTTCTTTTGAGACAGTGCCTCTCTATGCAGTCCTGG	4	-	41337857-41337906	4qA5	Mus musculus kinesin family member 24 (Kif24), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	9430029L23Rik; 4933425J19Rik	9430029L23Rik; 4933425J19Rik
Mus musculus	RefSeq	ILMN_210921	ILMN_210921	GPR84	NM_030720.1	NM_030720.1		80910	13507671	NM_030720.1	Gpr84	NP_109645.1	ILMN_1212695	003400086	S	1096	TGTGCTTCGCAGTGTTCCTCTGCTTCGCCCTCAGCTACATCCCCTTCCTG	15	-	103139071-103139120	15qF3	Mus musculus G protein-coupled receptor 84 (Gpr84), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	EX33	EX33
Mus musculus	RefSeq	ILMN_210921	ILMN_210921	GPR84	NM_030720.1	NM_030720.1		80910	13507671	NM_030720.1	Gpr84	NP_109645.1	ILMN_2991255	007000259	S	1456	GGTACACCACTTTCCCATTCAGGAATCAGTGCGTCAACCCTGTGTGACCC	15	-	103138711-103138760	15qF3	Mus musculus G protein-coupled receptor 84 (Gpr84), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	EX33	EX33
Mus musculus	MEEBO	ILMN_219066	ILMN_219066	2310065F04RIK	scl40066.6_203				51828467	XM_488600	2310065F04Rik		ILMN_2703821	004010731	S	2019	AACCCAGGTGGTTAAAACCAAGGCAGCATCCCTAATCTGTGCTTGGTCCA										
Mus musculus	RefSeq	ILMN_214794	ILMN_214794	KCNIP2	NM_145703.1	NM_145703.1		80906	41281733	NM_145703.1	Kcnip2	NP_663749.1	ILMN_2680958	001570086	S	91	GTAAAAAAGCCCTGAAGCAGCGTTTCCTCAAGCTGCTGCCGTGCTGCGGG	19	-	45871609-45871658	19qC3	Mus musculus Kv channel-interacting protein 2 (Kcnip2), transcript variant a, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	KChIP2b; AI851528; KChIP2a; KChIP2	KChIP2b; AI851528; KChIP2a; KChIP2
Mus musculus	Riken	ILMN_205980	ILMN_205980	D130067N22RIK	ri|D130067N22|PX00185I02|AK051727|1642					AK051727	D130067N22Rik		ILMN_1221182	003190114	S	1299	TTGTCCTTGCCTCAGGCCAATGGAAGGGCAGCTTCTGAGGCCTGGCCCTA										
Mus musculus	RefSeq	ILMN_224031	ILMN_244093	THNSL2	NM_178413.4	NM_178413.4		232078	76677921	NM_178413.4	Thnsl2	NP_848500.3	ILMN_2773485	006220025	S	1571	GGCCTGTCCCAGCGGTGGAAAGATTGTGTAGTGAACCCCTCAGAATAGCC	6	-	71078621-71078623:71078624-71078670	6qC1	Mus musculus threonine synthase-like 2 (bacterial) (Thnsl2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins [goid 9088] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: O-phospho-L-homoserine + H2O = L-threonine + phosphate [goid 4795] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IDA]	BC051244; TSH2; MGC59076	BC051244; TSH2; MGC59076
Mus musculus	RefSeq	ILMN_198664	ILMN_251916	EG434907	XM_486849.5	XM_486849.5		434907	149272151	XM_486849.5	EG434907	XP_486849.5	ILMN_1253181	000430619	S	1497	CTGTCTGGACAGGTCCTTACGGGCCCAGGTGTTCAGCTGCCCAGCCTGTG	X	-	118448691-118448740	XqE3	PREDICTED: Mus musculus predicted gene, EG434907 (EG434907), mRNA.					
Mus musculus	MEEBO	ILMN_185656	ILMN_185656	1700020I14RIK	scl20419.1.1265_30				51706333	XM_488956	1700020I14Rik		ILMN_2609506	000840368	S	4348	TTGTGCTCACAAAGCTGTGTGGTTGAGTGGTTACTGGTTGAGTTTGTGGG										
Mus musculus	RefSeq	ILMN_188463	ILMN_188463	YEATS4	NM_026570.1	NM_026570.1		64050	13386063	NM_026570.1	Yeats4	NP_080846.1	ILMN_3002281	003870280	S	1194	GACTGGTATGTGTGTTTAGTTCTTCAGGTCCACATCTGCCCGGGTCTACC	10	-	116619381-116619430	10qD2	Mus musculus YEATS domain containing 4 (Yeats4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B230215M10Rik; NuBI-1; GAS41; 4930573H17Rik	B230215M10Rik; NuBI-1; GAS41; 4930573H17Rik
Mus musculus	RefSeq	ILMN_188463	ILMN_188463	YEATS4	NM_026570.1	NM_026570.1		64050	13386063	NM_026570.1	Yeats4	NP_080846.1	ILMN_3002284	004670435	S	945	CCAGCCGGCCGTGGCTTTCTCAGAGAGGACTCCGGGTACCCACACTGTCA	10	-	116619630-116619679	10qD2	Mus musculus YEATS domain containing 4 (Yeats4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B230215M10Rik; NuBI-1; GAS41; 4930573H17Rik	B230215M10Rik; NuBI-1; GAS41; 4930573H17Rik
Mus musculus	Riken	ILMN_206801	ILMN_206801	CYBB	ri|A530008B12|PX00139P08|AK079926|931					AK079926	Cybb		ILMN_2582791	007160241	S	311	GACCATCACACCAAATGCTCTTTCCAAGGAAGAGCCAAGCAATGCTCTGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211093	ILMN_211093	NFAT5	NM_133957.2	NM_133957.2		54446	26080414	NM_133957.2	Nfat5	NP_598718.1	ILMN_2735633	003840291	S	12168	CCTTTAAAGATCCTGCATTCAACCCATGTCACCCCTACCTGCTCTCTCAC	8	+	109902534-109902583	8qD3	Mus musculus nuclear factor of activated T-cells 5 (Nfat5), transcript variant a, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The synthesis of RNA on a template of DNA [goid 6351] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	NFATL1; OREBP; mKIAA0827; TonEBP; nfatz; CAG80; CAG-8; B130038B15Rik; AI225870	NFATL1; OREBP; mKIAA0827; TonEBP; nfatz; CAG80; CAG-8; B130038B15Rik; AI225870
Mus musculus	RefSeq	ILMN_211093	ILMN_211093	NFAT5	NM_133957.2	NM_133957.2		54446	26080414	NM_133957.2	Nfat5	NP_598718.1	ILMN_2612448	004730196	S	12780	CCTTCTTGCATTGTCCTGCAGTGACGTAAGAGTGACATTGTGTATACGGC	8	+	109903146-109903195	8qD3	Mus musculus nuclear factor of activated T-cells 5 (Nfat5), transcript variant a, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The synthesis of RNA on a template of DNA [goid 6351] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	NFATL1; OREBP; mKIAA0827; TonEBP; nfatz; CAG80; CAG-8; B130038B15Rik; AI225870	NFATL1; OREBP; mKIAA0827; TonEBP; nfatz; CAG80; CAG-8; B130038B15Rik; AI225870
Mus musculus	Riken	ILMN_206920	ILMN_206920	COLEC12	ri|A530040J16|PX00141O11|AK079990|1839					AK079990	Colec12		ILMN_1257685	006840017	S	1469	GATTCTATCCAGCACCCCGAAGCCTTTCTCCTAACCGGACTAGCTCTCGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence ISS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with low-density lipoprotein, one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 30169] [evidence ISS]; Combining with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity. Such molecular patterns are sometimes associated with potential pathogens [goid 8329] [evidence ISS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]		
Mus musculus	RefSeq	ILMN_211338	ILMN_211338	SLC30A5	NM_022885.2	NM_022885.2		69048	67763825	NM_022885.2	Slc30a5	NP_075023.2	ILMN_1221208	004280494	S	2541	CAGCCCTGCGGCATGAACAGTGAACAGCGGAGGTCGGATGAGGTGATAAT	13	-	101573191-101573240	13qD1	Mus musculus solute carrier family 30 (zinc transporter), member 5 (Slc30a5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence ISA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence ISA]	Zntl1; ZnT-5; 1810010K08Rik; ZTL1; AF233321; ZNT5	Zntl1; ZnT-5; 1810010K08Rik; ZTL1; AF233321; ZNT5
Mus musculus	RefSeq	ILMN_211338	ILMN_211338	SLC30A5	NM_022885.2	NM_022885.2		69048	67763825	NM_022885.2	Slc30a5	NP_075023.2	ILMN_2614778	001570619	S	2525	TACATCATGTGAGACGCAGCCCTGCGGCATGAACAGTGAACAGCGGAGGT	13	-	101573207-101573245:101573246-101573256	13qD1	Mus musculus solute carrier family 30 (zinc transporter), member 5 (Slc30a5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence ISA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence ISA]	Zntl1; ZnT-5; 1810010K08Rik; ZTL1; AF233321; ZNT5	Zntl1; ZnT-5; 1810010K08Rik; ZTL1; AF233321; ZNT5
Mus musculus	Riken	ILMN_204686	ILMN_204686	A230090K04RIK	ri|A230090K04|PX00130M17|AK039052|789					AK039052	A230090K04Rik		ILMN_1249260	003840500	S	458	GAGCAGCGCTTCCAGGGAAACCCAAAGCCTGCACTGTAAGAAGCAACTCT										
Mus musculus	RefSeq	ILMN_245563	ILMN_245563	OLFR193	NM_001011791.1	NM_001011791.1		257972	58801347	NM_001011791.1	Olfr193	NP_001011791.1	ILMN_2920143	006110356	S	318	CAGTGCAACCACGGAATGTTTTCTTTTGGCATCAATGGCCTATGATCGCT	16	-	59110067-59110116	16qC1.3	Mus musculus olfactory receptor 193 (Olfr193), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR183-7P	MOR183-7P
Mus musculus	RefSeq	ILMN_201063	ILMN_241160	TOMT	NM_001081679.1	NM_001081679.1		791260	126157493	NM_001081679.1	Tomt	NP_001075148.1	ILMN_1243144	002340253	S	553	GCTCAGAGGAAGTGATCCCACGCCTAAGAGCTCAGCACCAGCTGAATCGT	7	-	109049068-109049117	7qE3	Mus musculus transmembrane O-methyltransferase (Tomt), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_241160	ILMN_241160	TOMT	NM_001081679.1	NM_001081679.1		791260	126157493	NM_001081679.1	Tomt	NP_001075148.1	ILMN_2947105	003390037	S	1216	AGCACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCA	7	-	109048405-109048454	7qE3	Mus musculus transmembrane O-methyltransferase (Tomt), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_255500	ILMN_255500	SIX3	NM_011381.3	NM_011381.3		20473	118130181	NM_011381.3	Six3	NP_035511.2	ILMN_2983735	006220095	S	1291	AGAGTCACCGTCCACGGCGGCCAGCCCGACCACCAGTGTGTCCAGCCTGA	17	+	86023142-86023191	17qE4	Mus musculus sine oculis-related homeobox 3 homolog (Drosophila) (Six3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain [goid 21797] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]; The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain [goid 21797] [evidence IGI]; The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex [goid 21536] [evidence IGI]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Six3alpha; Six3a; Six3b; Six3beta	Six3alpha; Six3a; Six3b; Six3beta
Mus musculus	RefSeq	ILMN_218850	ILMN_218850	NDC80	NM_023294.1	NM_023294.1		67052	12963624	NM_023294.1	Ndc80	NP_075783.1	ILMN_1227733	006860750	S	1663	CACTGTGAGGATGCTGAAGGAGGAGATTCAGAAACTGGATGACCTTCACC	17	-	71850849-71850898	17qE1.3	Mus musculus NDC80 homolog, kinetochore complex component (S. cerevisiae) (Ndc80), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through metaphase, the stage of mitosis at which chromosomes are firmly attached to the mitotic spindle at its equator but have not yet segregated to opposite poles [goid 89] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HEC; AV139730; Kntc2; 2610020P18Rik; HEC1	HEC; AV139730; Kntc2; 2610020P18Rik; HEC1
Mus musculus	RefSeq	ILMN_218850	ILMN_218850	NDC80	NM_023294.1	NM_023294.1		67052	12963624	NM_023294.1	Ndc80	NP_075783.1	ILMN_2816754	003390273	S	1825	GGCCATGGATGAGTTGGACGCTGTCCAGCGGGAATACCAGCTAACTGTGA	17	-	71848679-71848709:71849612-71849630	17qE1.3	Mus musculus NDC80 homolog, kinetochore complex component (S. cerevisiae) (Ndc80), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through metaphase, the stage of mitosis at which chromosomes are firmly attached to the mitotic spindle at its equator but have not yet segregated to opposite poles [goid 89] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HEC; AV139730; Kntc2; 2610020P18Rik; HEC1	HEC; AV139730; Kntc2; 2610020P18Rik; HEC1
Mus musculus	RefSeq	ILMN_198622	ILMN_198622	LOC245538	XM_141976.3	XM_141976.3			38086512	XM_141976.3	LOC245538		ILMN_2532341	004920309	S	961	CAGGACACTCTTCCCAAAGCAGAAGAGGCGGTCATCAGAGCTGCACCAGC										
Mus musculus	RefSeq	ILMN_211794	ILMN_211794	DNAJB4	NM_027287.2	NM_027287.2		67035	142371821	NM_027287.2	Dnajb4	NP_081563.1	ILMN_2619611	001010653	S	141	GACCACCGGGCCCTTAGTTCTCGAGCCGATTGCCTACTGAGTCTCTTATG	3	-	151872857-151872906	3qH3	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 4 (Dnajb4), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	1700029A20Rik; 5730460G06Rik; 2010306G19Rik	1700029A20Rik; 5730460G06Rik; 2010306G19Rik
Mus musculus	MEEBO	ILMN_195213	ILMN_195213	DAAM1	scl43124.28_0				27369624	NM_172464	Daam1		ILMN_2712603	002600706	S	3097	TTCCTGAGAGCTTCCCTGGCAGCCTGGCTCCTATGTGAATGAGCGGGGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187447	ILMN_250811	MYOT	NM_001033621.3	NM_001033621.3		58916	146198800	NM_001033621.3	Myot	NP_001028793.1	ILMN_2444217	000110239	S	551	GCCAGCTTCCTCAGTTCTATATTACCGTCTCAACCCGATTACTGTAACAG				18qB3	Mus musculus myotilin (Myot), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	5530402I04Rik; Ttid	5530402I04Rik; Ttid
Mus musculus	RefSeq	ILMN_187447	ILMN_250811	MYOT	NM_001033621.3	NM_001033621.3		58916	146198800	NM_001033621.3	Myot	NP_001028793.1	ILMN_2478649	002480093	S	1476	CCGGAAGAGTAACTTTACTGATAAAAGATGTAAACAAGAAGGACGCTGGG				18qB3	Mus musculus myotilin (Myot), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	5530402I04Rik; Ttid	5530402I04Rik; Ttid
Mus musculus	RefSeq	ILMN_191677	ILMN_326329	AI504432	XR_035125.1	XR_035125.1		229694	149251722	XR_035125.1	AI504432		ILMN_2606331	004200445	S	2097	ATTGCCAGGCTTTAGTTCTTGAATTGCAGAGTGTGTGCACCAGGTTCAGC				3qF2.3	PREDICTED: Mus musculus expressed sequence AI504432 (AI504432), misc RNA.					
Mus musculus	RefSeq	ILMN_210429	ILMN_210429	KRT16	NM_008470.1	NM_008470.1		16666	6680603	NM_008470.1	Krt16	NP_032496.1	ILMN_1229813	002970392	S	1368	GGAGCAAGGTTCAACCAGCTTCAGCCAGAGCCAAAGTCAGAGTTCCAGGG	11	-	100107552-100107601	11qD	Mus musculus keratin 16 (Krt16), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	K16; Krt1-16; MGC124148; AI324768	K16; Krt1-16; MGC124148; AI324768
Mus musculus	RefSeq	ILMN_223666	ILMN_223666	FOXD3	NM_010425.3	NM_010425.3		15221	112807214	NM_010425.3	Foxd3	NP_034555.3	ILMN_1216212	006580093	S	2255	AAAAGGCGAAGTGTCATTGTATTATAAAAGTCTGTTTATATATGAATGAA	4	+	99325244-99325293	4qC6	Mus musculus forkhead box D3 (Foxd3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence TAS]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hfh2; Genesis; CWH3	Hfh2; Genesis; CWH3
Mus musculus	MEEBO	ILMN_210624	ILMN_210624	SDCCAG1	scl42393.9.1_8	NM_181665.1			32130522	NM_181665.1	Sdccag1		ILMN_2680160	004890349	S	1789	CCACGGACTTTGACTGAAGCAGGCACAATGGCACTTTGCTACAGTGCTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	Riken	ILMN_202795	ILMN_202795	8430407G10RIK	ri|8430407G10|PX00024J04|AK078805|3581					AK078805	8430407G10Rik		ILMN_1237927	002190068	S	3367	TCCCCTTACCCACCAGGTCAGTGTCTTCCTCAAGCCCTGGAGCGTTGGAA										
Mus musculus	RefSeq	ILMN_213319	ILMN_249762	9030420J04RIK	XM_146632.7	XM_146632.7		71544	94385576	XM_146632.7	9030420J04Rik	XP_146632.7	ILMN_1253035	004640164	S	378	GGGAGCGATTGCAGTGTCACGAGATCGAGCTGGAGAGAACCAACAAGTTC	9	-	9238674-9238723	9qA1	PREDICTED: Mus musculus RIKEN cDNA 9030420J04 gene (9030420J04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213319	ILMN_249762	9030420J04RIK	XM_146632.7	XM_146632.7		71544	94385576	XM_146632.7	9030420J04Rik	XP_146632.7	ILMN_1225757	002850470	S	1747	TGCTGTCAAGTCAGACGACCAAAACTACAGGGTGGAGGCAGTCCATGCAC	9	-	9011399-9011441:9015300-9015306	9qA1	PREDICTED: Mus musculus RIKEN cDNA 9030420J04 gene (9030420J04Rik), mRNA.					
Mus musculus	MEEBO	ILMN_190104	ILMN_190104	2310079P10RIK	scl18026.1.950_16						2310079P10Rik		ILMN_2467199	004220082	S	17	CAGGAGCCTGAGCTACCTACTAAACCATGAGGGTGTTTTAATGACCAGGC										
Mus musculus	MEEBO	ILMN_224246	ILMN_224246	PFDN4	scl00109054.1_86				51712741	XM_355370	Pfdn4		ILMN_2777270	004590750	S	380	ATCATGCTGGAGATGGCGACTGCTTAATGATTCCCTACCAGATCGGAGAC										
Mus musculus	RefSeq	ILMN_212158	ILMN_212158	APOA1	NM_009692.2	NM_009692.2		11806	141803330	NM_009692.2	Apoa1	NP_033822.1	ILMN_2623393	002510204	S	683	TACCACACCAGGGCCAAAACCCACCTGAAGACACTTGGCGAGAAAGCCAG	9	+	46038327-46038376	9qA5.2	Mus musculus apolipoprotein A-I (Apoa1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels during angiogenesis [goid 43534] [evidence IMP]; The multiplication or reproduction of endothelial cells, resulting in the expansion of a cell population. Endothelial cells are thin flattened cells which line the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 1935] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence ISO]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IMP]; Any process that modulates the frequency, rate or extent of absorption of cholesterol into the blood, and the exclusion of other sterols from absorption [goid 30300] [evidence IDA]; The regrowth of axons following their loss or damage [goid 31103] [evidence IGI]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IGI]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IMP]; The chemical reactions and pathways involving glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 8211] [evidence IMP]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IMP]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IDA]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IGI]; The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42158] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42158] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor [goid 51347] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IDA]	Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IMP]; Interacting selectively with a lipid [goid 8289] [evidence IDA]; Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 8034] [evidence IDA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence IDA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IDA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	Sep-1; Lvtw-1; MGC102525; Brp-14; Sep-2; Sep2; Apoa-1; Ltw-1; Alp-1	Sep-1; Lvtw-1; MGC102525; Brp-14; Sep-2; Sep2; Apoa-1; Ltw-1; Alp-1
Mus musculus	RefSeq	ILMN_200282	ILMN_200282	LOC386130	XM_359083.1	XM_359083.1			38081212	XM_359083.1	LOC386130		ILMN_1255275	003170019	S	48	CCAGTGGTCATTCCCTGGACTAACTGATGGTATTCAGGCTCTAGATTGCC										
Mus musculus	RefSeq	ILMN_213280	ILMN_233157	LHFPL3	NM_001081231.1	NM_001081231.1		269629	124486998	NM_001081231.1	Lhfpl3	NP_001074700.1	ILMN_1254301	006350148	S	2342	CATCAGCTGGAGGACAACACAAGAATCAGGTTGCCCTCTCTTATGCTCCC	5	+	22780642-22780691	5qA3	Mus musculus lipoma HMGIC fusion partner-like 3 (Lhfpl3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A930031L14Rik	A930031L14Rik
Mus musculus	RefSeq	ILMN_202668	ILMN_233157	LHFPL3	NM_001081231.1	NM_001081231.1		269629	124486998	NM_001081231.1	Lhfpl3	NP_001074700.1	ILMN_1251250	003710347	S	921	GTACATCAGCACCAAGAAGGAAGACGCTTGGGAGAGATCAGAGTCCAGAG	5	+	22779221-22779270	5qA3	Mus musculus lipoma HMGIC fusion partner-like 3 (Lhfpl3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A930031L14Rik	A930031L14Rik
Mus musculus	RefSeq	ILMN_199987	ILMN_233157	LHFPL3	NM_001081231.1	NM_001081231.1		269629	124486998	NM_001081231.1	Lhfpl3	NP_001074700.1	ILMN_1215964	006100017	S	629	ACGGATGTGCGGAGAGAAGACAGACAAGTACACTCTTGGGGCCTGCTCGG	5	+	22608291-22608340	5qA3	Mus musculus lipoma HMGIC fusion partner-like 3 (Lhfpl3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A930031L14Rik	A930031L14Rik
Mus musculus	Riken	ILMN_206590	ILMN_206590	E030013D07RIK	ri|E030013D07|PX00204B20|AK086941|1799					AK086941	E030013D07Rik		ILMN_1251964	006940746	S	1723	GTGTGCAGCTGTAATGCCAGCACTGGGGAGGTGGGCTAACCTGGGCTATT										
Mus musculus	Riken	ILMN_205551	ILMN_205551	2810441E16RIK	ri|2810441E16|ZX00096I17|AK028232|843					AK028232	2810441E16Rik		ILMN_1217727	002570500	S	403	CAGTTCTGTCAGGGACATTGTTTCTTCATCCGGAGGCACGTGTTCCTGGG										
Mus musculus	RefSeq	ILMN_222802	ILMN_222802	RCBTB2	NM_134083.2	NM_134083.2		105670	31542382	NM_134083.2	Rcbtb2	NP_598844.2	ILMN_2812087	002340521	S	2629	CAGTATTCAGCTGGCTGATACATAGTTATACAAGGAATGCTGTCATGCCC	14	+	71917479-71917528	14qD3	Mus musculus regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 (Rcbtb2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW240694; 2810420M18Rik; Chc1l; AI448345; 2610028E02Rik	AW240694; 2810420M18Rik; Chc1l; AI448345; 2610028E02Rik
Mus musculus	RefSeq	ILMN_222802	ILMN_222802	RCBTB2	NM_134083.2	NM_134083.2		105670	31542382	NM_134083.2	Rcbtb2	NP_598844.2	ILMN_2812084	000240086	S	2319	GTCAGTCTCTGATTTCATACCTGTGTGTCCTGTTCTTTCAGGGTAGGCCC	14	+	71917169-71917218	14qD3	Mus musculus regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 (Rcbtb2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW240694; 2810420M18Rik; Chc1l; AI448345; 2610028E02Rik	AW240694; 2810420M18Rik; Chc1l; AI448345; 2610028E02Rik
Mus musculus	RefSeq	ILMN_213227	ILMN_213227	IL22RA1	NM_178257.1	NM_178257.1		230828	30142708	NM_178257.1	Il22ra1	NP_839988.1	ILMN_2975455	002710279	S	1462	ACACCACGGTACCTGAAGGGGGCGCTGTCTCTCCTGTCCTCTGTGCAGAT	4	+	135306996-135307045	4qD3	Mus musculus interleukin 22 receptor, alpha 1 (Il22ra1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Il22r; IL-22R	Il22r; IL-22R
Mus musculus	RefSeq	ILMN_191550	ILMN_234742	XPNPEP3	NM_177310.2	NM_177310.2		321003	31343310	NM_177310.2	Xpnpep3	NP_796284.1	ILMN_2642546	000010376	S	2901	GTCCACCTCTTACTCTAACGCTAGGGGATGACATGGCAAGGCAGTGGCAG	15	+	81284983-81285032	15qE1	Mus musculus X-prolyl aminopeptidase (aminopeptidase P) 3, putative (Xpnpep3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	E430012M05Rik	E430012M05Rik
Mus musculus	RefSeq	ILMN_220910	ILMN_220910	SERPINA3M	NM_009253.1	NM_009253.1		20717	6678094	NM_009253.1	Serpina3m	NP_033279.1	ILMN_2728473	000110435	S	1267	CCTCTTTATGGCCAAAGTCACTAACCCCAAGTGAACCTAAAGCTCCCCAA	12	+	105632103-105632137:105632138-105632152	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 3M (Serpina3m), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	MMSPi2.4; Spi-2l; Spi2-rs1; 3e46; MMCM7; AI195004; Spi-2rs1; Spi2.4; spi2	MMSPi2.4; Spi-2l; Spi2-rs1; 3e46; MMCM7; AI195004; Spi-2rs1; Spi2.4; spi2
Mus musculus	RefSeq	ILMN_215778	ILMN_215778	OLFR806	NM_146553.1	NM_146553.1		258546	22129532	NM_146553.1	Olfr806	NP_666764.1	ILMN_2922743	003830519	S	665	CTATCCTAAAGTTCCCTTCAGCTCAACAAAGGAAAAAGGCCTTTTCCACC	10	-	129175257-129175306	10qD3	Mus musculus olfactory receptor 806 (Olfr806), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR110-5; MOR110-12	MOR110-5; MOR110-12
Mus musculus	RefSeq	ILMN_221537	ILMN_215778	OLFR806	NM_146553.1	NM_146553.1		258546	22129532	NM_146553.1	Olfr806	NP_666764.1	ILMN_2736901	007650220	S	584	GGATGGCTTTTGTCATAGCTATAATGACACTTATCATCACCTTGATCTTA	10	-	129175338-129175387	10qD3	Mus musculus olfactory receptor 806 (Olfr806), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR110-5; MOR110-12	MOR110-5; MOR110-12
Mus musculus	RefSeq	ILMN_215778	ILMN_215778	OLFR806	NM_146553.1	NM_146553.1		258546	22129532	NM_146553.1	Olfr806	NP_666764.1	ILMN_1223981	007160520	S	621	CACCTTGATCTTAGTGATTCTTTCCTACACACTCATCATCAAAACTATCC	10	-	129175301-129175350	10qD3	Mus musculus olfactory receptor 806 (Olfr806), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR110-5; MOR110-12	MOR110-5; MOR110-12
Mus musculus	RefSeq	ILMN_215778	ILMN_215778	OLFR806	NM_146553.1	NM_146553.1		258546	22129532	NM_146553.1	Olfr806	NP_666764.1	ILMN_1235849	007210327	S	288	AGCTCAATTGTTCTTCTTTTTTCTACTACTTATCACAGAGTTCTACCTCC	10	-	129175634-129175683	10qD3	Mus musculus olfactory receptor 806 (Olfr806), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR110-5; MOR110-12	MOR110-5; MOR110-12
Mus musculus	RefSeq	ILMN_195233	ILMN_246134	SEC63	NM_153055.2	NM_153055.2		140740	31981947	NM_153055.2	Sec63	NP_694695.2	ILMN_2694579	004780377	S	2443	CGGATGCAAAAAAGAGGCCGCTGGTGCCAGGGTACGATCTGAAAAGGGTT	10	+	42548961-42549010	10qB2	Mus musculus SEC63-like (S. cerevisiae) (Sec63), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	AW319215; 5730478J10Rik; AI649014	AW319215; 5730478J10Rik; AI649014
Mus musculus	RefSeq	ILMN_195233	ILMN_246134	SEC63	NM_153055.2	NM_153055.2		140740	31981947	NM_153055.2	Sec63	NP_694695.2	ILMN_2714822	005720082	S	2426	GCCGACTTTACTAGAAACGGATGCAAAAAAGAGGCCGCTGGTGCCAGGGT	10	+	42548944-42548993	10qB2	Mus musculus SEC63-like (S. cerevisiae) (Sec63), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	AW319215; 5730478J10Rik; AI649014	AW319215; 5730478J10Rik; AI649014
Mus musculus	RefSeq	ILMN_212347	ILMN_254571	LMAN2L	NM_001013374.1	NM_001013374.1		214895	61656185	NM_001013374.1	Lman2l	NP_001013392.1	ILMN_1220769	006940086	S	1895	AGCAGCTTTCTTCTTACTCCCTGGACTTGGACATGGCCCCAAGATGCTTG	1	-	36480311-36480360	1qB	Mus musculus lectin, mannose-binding 2-like (Lman2l), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	A630028F14Rik; VIPL; DKFZp564L2423; VIP36-like	A630028F14Rik; VIPL; DKFZp564L2423; VIP36-like
Mus musculus	RefSeq	ILMN_212347	ILMN_254571	LMAN2L	NM_001013374.1	NM_001013374.1		214895	61656185	NM_001013374.1	Lman2l	NP_001013392.1	ILMN_1237323	007560674	S	2155	CCTGGAGGGCCTGGCACAGTTCTCTGTAGCCCGAGGAAAAGGCTTCATAA	1	-	36480051-36480100	1qB	Mus musculus lectin, mannose-binding 2-like (Lman2l), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	A630028F14Rik; VIPL; DKFZp564L2423; VIP36-like	A630028F14Rik; VIPL; DKFZp564L2423; VIP36-like
Mus musculus	RefSeq	ILMN_198885	ILMN_234512	ZFP791	NM_001037745.1	NM_001037745.1		244556	83627692	NM_001037745.1	Zfp791	NP_001032834.1	ILMN_1232694	001340424	S	957	CCTTCAGTTGTCCCAGTTCCATCCAAATCCACGAAAGAACCCACACCGGG	8	-	87634391-87634440	8qC3	Mus musculus zinc finger protein 791 (Zfp791), mRNA. XM_901120 XM_901124 XM_901126 XM_901130 XM_901134 XM_901139 XM_901142 XM_911306 XM_921916 XM_921922 XM_921927 XM_921933 XM_921940 XM_921945 XM_921949 XM_921953 XM_921956 XM_921961			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC117728; EG244556	MGC117728; EG244556
Mus musculus	RefSeq	ILMN_234512	ILMN_234512	ZFP791	NM_001037745.1	NM_001037745.1		244556	83627692	NM_001037745.1	Zfp791	NP_001032834.1	ILMN_2990485	003180767	S	1802	GCCTTCAGGCTCGGCAGTTCCCTTAAAAGACATGAGAGAACTCACAGCTG	8	-	87633546-87633595	8qC3	Mus musculus zinc finger protein 791 (Zfp791), mRNA. XM_901120 XM_901124 XM_901126 XM_901130 XM_901134 XM_901139 XM_901142 XM_911306 XM_921916 XM_921922 XM_921927 XM_921933 XM_921940 XM_921945 XM_921949 XM_921953 XM_921956 XM_921961			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC117728; EG244556	MGC117728; EG244556
Mus musculus	RefSeq	ILMN_217373	ILMN_256002	USP50	NM_029163.2	NM_029163.2		75083	141802313	NM_029163.2	Usp50	NP_083439.1	ILMN_2682467	004040746	S	1154	GCCTGGTACAGCTTTGATGACACCCGAGTCAGTGAGATCCCAGATACTTC	2	-	126587314-126587363	2qF1	Mus musculus ubiquitin specific peptidase 50 (Usp50), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	1700086G18Rik; 4930511O11Rik	1700086G18Rik; 4930511O11Rik
Mus musculus	RefSeq	ILMN_218404	ILMN_323434	2700029M09RIK	XM_001474993.1	XM_001474993.1		72612	149258776	XM_001474993.1	2700029M09Rik	XP_001475043.1	ILMN_1253477	002490762	S	960	GGCATGGGGCTGGAATTAGGAATGGACCTCTTTTGCTATGGCTCTCATTA	8	+	63384470-63384517:63386134-63386135	8qB3.1	PREDICTED: Mus musculus RIKEN cDNA 2700029M09 gene (2700029M09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221811	ILMN_221811	ARL6IP6	NM_022989.2	NM_022989.2		65103	31560284	NM_022989.2	Arl6ip6	NP_075365.2	ILMN_2833965	007050239	S	1897	GGAAAACATTGTGTAGTCAGTGTGTATTCTAGCTAAGTGGCAAGTGAGTG	2	+	53040601-53040650	2qC1.1	Mus musculus ADP-ribosylation factor-like 6 interacting protein 6 (Arl6ip6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Aip-6; 2610529A11Rik; 2310057C01Rik	Aip-6; 2610529A11Rik; 2310057C01Rik
Mus musculus	RefSeq	ILMN_192623	ILMN_218336	CRTC3	NM_173863.2	NM_173863.2		70461	140971159	NM_173863.2	Crtc3	NP_776288.2	ILMN_1214578	007330110	S	4538	CTTTAAGCCACTAGAGAGCCTACCGGTCTACATGGTGTTGAGTACAGCAG	7	-	87732040-87732089	7qD3	Mus musculus CREB regulated transcription coactivator 3 (Crtc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MGC19083; TORC3; AI429792; 6332415K15Rik; BC011210; 2610312F20Rik	MGC19083; TORC3; AI429792; 6332415K15Rik; BC011210; 2610312F20Rik
Mus musculus	RefSeq	ILMN_218336	ILMN_218336	CRTC3	NM_173863.2	NM_173863.2		70461	140971159	NM_173863.2	Crtc3	NP_776288.2	ILMN_1248891	003390504	S	3232	TCATCCAGTGCATCCAGCATGGCTGATCACACCAAGCCCCAGGAGTGTGG	7	-	87733346-87733395	7qD3	Mus musculus CREB regulated transcription coactivator 3 (Crtc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MGC19083; TORC3; AI429792; 6332415K15Rik; BC011210; 2610312F20Rik	MGC19083; TORC3; AI429792; 6332415K15Rik; BC011210; 2610312F20Rik
Mus musculus	RefSeq	ILMN_219961	ILMN_219961	LRRC25	NM_153074.3	NM_153074.3		211228	142347603	NM_153074.3	Lrrc25	NP_694714.1	ILMN_2715800	003830162	S	922	ACAATGGATTATGAGAATGTCTTTATTGGCCAGCCGGCCGAGGACTGCTC	8	+	73142199-73142248	8qB3.3	Mus musculus leucine rich repeat containing 25 (Lrrc25), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mapa	Mapa
Mus musculus	RefSeq	ILMN_196420	ILMN_196420	2700082O15RIK	XM_355345.1	XM_355345.1			38075005	XM_355345.1	2700082O15Rik		ILMN_1227688	006960286	S	828	CCCTTTCAAGTGTGAGAACCCTACCAACTGGGCAAGGGCACACCCCAGAT										
Mus musculus	RefSeq	ILMN_212406	ILMN_212406	CPLX4	NM_145493.1	NM_145493.1		225644	21703969	NM_145493.1	Cplx4	NP_663468.1	ILMN_1247547	000380725	S	1504	CCCTGGTACATCGCACCAGATGACTCTATCTCAGTTAACACCAACTCCTG	18	-	66115578-66115627	18qE1	Mus musculus complexin 4 (Cplx4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IDA]	Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence IDA]; Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IEA]	A930004D23Rik; Gm957; CPXIV	A930004D23Rik; Gm957; CPXIV
Mus musculus	RefSeq	ILMN_193094	ILMN_246855	CRB1	NM_133239.1	NM_133239.1		170788	18875405	NM_133239.1	Crb1	NP_573502.1	ILMN_2627090	004570286	S	4492	CATCCATTCACAGAAGAGTGTCCCTGTGTTCGCCTGTCAGCCTCAGAATT	1	-	141094956-141095005	1qF	Mus musculus crumbs homolog 1 (Drosophila) (Crb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A930008G09Rik; 7530426H14Rik	A930008G09Rik; 7530426H14Rik
Mus musculus	RefSeq	ILMN_209280	ILMN_209280	AADAT	NM_011834.2	NM_011834.2		23923	118130028	NM_011834.2	Aadat	NP_035964.1	ILMN_2594302	000770132	S	1493	CCCTGAACCACTTTAAAGTCCCCTTAAATCCATCACATTGCCAAATAGCT	8	+	63024187-63024236	8qB3.1	Mus musculus aminoadipate aminotransferase (Aadat), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-2-aminoadipate + 2-oxoglutarate = 2-oxoadipate + L-glutamate [goid 47536] [evidence IEA]; Catalysis of the reaction: L-kynurenine + 2-oxoglutarate = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-glutamate [goid 16212] [evidence IEA]	KATII; Aadt; AI875679; mKat-2; Kat2	KATII; Aadt; AI875679; mKat-2; Kat2
Mus musculus	RefSeq	ILMN_184151	ILMN_239992	1110007M04RIK	NM_026742.3	NM_026742.3		68493	142382818	NM_026742.3	1110007M04Rik	NP_081018.1	ILMN_2734060	001110435	S	592	AAATCACGAAACAACTTCCCCTGTATGTGTTCCCAAGCTCCGCGCCCTTG	4	+	24829126-24829175	4qA3	Mus musculus RIKEN cDNA 1110007M04 gene (1110007M04Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	AW214064; RP23-372J10.1; 3000003G13Rik	AW214064; RP23-372J10.1; 3000003G13Rik
Mus musculus	RefSeq	ILMN_190529	ILMN_248042	ZNHIT1	NM_027318.3	NM_027318.3		70103	146141087	NM_027318.3	Znhit1	NP_081594.1	ILMN_1224876	006860504	S	500	ACCCCCATGCCGGCCTCCCCCAGCTGGGCAAGAGGCTACCTCAGTTTGAT				5qG2	Mus musculus zinc finger, HIT domain containing 1 (Znhit1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ZNFN4A1; 2700001K05Rik	ZNFN4A1; 2700001K05Rik
Mus musculus	RefSeq	ILMN_196712	ILMN_196712	KLK1B26	NM_010644.1	NM_010644.1		16618	6754459	NM_010644.1	Klk1b26	NP_034774.1	ILMN_1217308	004670711	S	558	GTGTGTGTTCATCACGCTCCTCCCCAATGAGAACTGTGCCAAAGTCTACC	7	+	51271651-51271700	7qB4	Mus musculus kallikrein 1-related petidase b26 (Klk1b26), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	mGK26; PRECE-2; Klk26; mGK-26; Egfbp2	mGK26; PRECE-2; Klk26; mGK-26; Egfbp2
Mus musculus	RefSeq	ILMN_196712	ILMN_196712	KLK1B26	NM_010644.1	NM_010644.1		16618	6754459	NM_010644.1	Klk1b26	NP_034774.1	ILMN_1229177	006100324	S	667	TGTGCGGGTGACTCCGGAGGCCCACTGATTTGTGATGGTATTCTCCAAGG	7	+	51271760-51271765:51272135-51272178	7qB4	Mus musculus kallikrein 1-related petidase b26 (Klk1b26), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	mGK26; PRECE-2; Klk26; mGK-26; Egfbp2	mGK26; PRECE-2; Klk26; mGK-26; Egfbp2
Mus musculus	MEEBO	ILMN_213851	ILMN_213851	PCP2	scl35155.3_8	NM_008790.1			6679224	NM_008790.1	Pcp2		ILMN_2641456	004040612	S	384	CCAGACACAAGCTCCTTGAGAGTTCTAGCCATCCTGGGCCTCCCACTGGC							The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211688	ILMN_211688	RAB7	NM_009005.1	NM_009005.1		19349	6679598	NM_009005.1	Rab7	NP_033031.1	ILMN_1248907	006520424	S	1765	GATGCCCTTTTGTCACTATCCTACTCAAAGAGGAAAGGAGAACCCACCAG	6	-	87949394-87949443	6qD1	Mus musculus RAB7, member RAS oncogene family (Rab7), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC102153	MGC102153
Mus musculus	RefSeq	ILMN_211688	ILMN_211688	RAB7	NM_009005.1	NM_009005.1		19349	6679598	NM_009005.1	Rab7	NP_033031.1	ILMN_2618549	000870167	S	60	GGCCGGGCAGCTCCGAGGAGCCTGCTGGAGCCGGAATCGGACGTCTCTGT	6	-	87995105-87995154	6qD1	Mus musculus RAB7, member RAS oncogene family (Rab7), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC102153	MGC102153
Mus musculus	RefSeq	ILMN_211688	ILMN_211688	RAB7	NM_009005.1	NM_009005.1		19349	6679598	NM_009005.1	Rab7	NP_033031.1	ILMN_1254837	003890300	S	50	CGGTGTTTGGGGCCGGGCAGCTCCGAGGAGCCTGCTGGAGCCGGAATCGG	6	-	87995115-87995164	6qD1	Mus musculus RAB7, member RAS oncogene family (Rab7), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC102153	MGC102153
Mus musculus	RefSeq	ILMN_209535	ILMN_209535	HNRPA3	NM_198090.1	NM_198090.1		229279	37674276	NM_198090.1	Hnrpa3	NP_932758.1	ILMN_2666458	000780601	S	2545	TAGCATAATGAAATGTTACAGAAAGATGACCTTTTCATTAAAATATTTTT	2	+	75507406-75507455	2qC3	Mus musculus heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3), transcript variant a, mRNA.				2610510D13Rik; MGC101940; 2410013L13Rik; 2610209F03Rik; hnRNPA3; MGC37309	2610510D13Rik; MGC101940; 2410013L13Rik; 2610209F03Rik; hnRNPA3; MGC37309
Mus musculus	RefSeq	ILMN_209535	ILMN_209535	HNRPA3	NM_198090.1	NM_198090.1		229279	37674276	NM_198090.1	Hnrpa3	NP_932758.1	ILMN_1220620	005220576	S	1532	GTATGACTTTAATAAGCTGTTCCCACCCTAAGAACTAGGAACTTTCACAG	2	+	75506393-75506442	2qC3	Mus musculus heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3), transcript variant a, mRNA.				2610510D13Rik; MGC101940; 2410013L13Rik; 2610209F03Rik; hnRNPA3; MGC37309	2610510D13Rik; MGC101940; 2410013L13Rik; 2610209F03Rik; hnRNPA3; MGC37309
Mus musculus	RefSeq	ILMN_219051	ILMN_219051	STAC2	NM_146028.4	NM_146028.4		217154	146149186	NM_146028.4	Stac2	NP_666140.1	ILMN_2703563	000610047	S	2840	CGAGAGGACACTGATTCTCTACCCAACACACCTTGCCCCATTTTCCCCCT				11qD	Mus musculus SH3 and cysteine rich domain 2 (Stac2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW240854; 24b2; 24b2/STAC2; MGC38869	AW240854; 24b2; 24b2/STAC2; MGC38869
Mus musculus	RefSeq	ILMN_209910	ILMN_240732	HAAO	NM_025325.2	NM_025325.2		107766	124249069	NM_025325.2	Haao	NP_079601.1	ILMN_2600365	006330164	S	455	CTTCGAGAAATGGTTCCACTGTAAGGACCTTGGCACGCAGTTAGCACCCA	17	-	84234824-84234873	17qE4	Mus musculus 3-hydroxyanthranilate 3,4-dioxygenase (Haao), mRNA. XM_925483 XM_986039 XM_986095 XM_988905 XM_988933 XM_988974	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-hydroxyanthranilate + O2 = 2-amino-3-carboxymuconate semialdehyde [goid 334] [evidence IDA]	0610007K21Rik; 0610012J07Rik	0610007K21Rik; 0610012J07Rik
Mus musculus	RefSeq	ILMN_189201	ILMN_240732	HAAO	NM_025325.2	NM_025325.2		107766	124249069	NM_025325.2	Haao	NP_079601.1	ILMN_2459219	005220280	S	596	ACGGTCCATCATGAAGCCCATGTCATTGAAGGCCTGGCTGGATGGCCACT	17	-	84234177-84234226	17qE4	Mus musculus 3-hydroxyanthranilate 3,4-dioxygenase (Haao), mRNA. XM_925483 XM_986039 XM_986095 XM_988905 XM_988933 XM_988974	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-hydroxyanthranilate + O2 = 2-amino-3-carboxymuconate semialdehyde [goid 334] [evidence IDA]	0610007K21Rik; 0610012J07Rik	0610007K21Rik; 0610012J07Rik
Mus musculus	RefSeq	ILMN_210663	ILMN_240732	HAAO	NM_025325.2	NM_025325.2		107766	124249069	NM_025325.2	Haao	NP_079601.1	ILMN_2607951	001740164	S	1109	CCAGACTCCTAGGACATCAGCAGTCCCCGATCTTCTAACAGCCATAGCCC	17	-	84230759-84230808	17qE4	Mus musculus 3-hydroxyanthranilate 3,4-dioxygenase (Haao), mRNA. XM_925483 XM_986039 XM_986095 XM_988905 XM_988933 XM_988974	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-hydroxyanthranilate + O2 = 2-amino-3-carboxymuconate semialdehyde [goid 334] [evidence IDA]	0610007K21Rik; 0610012J07Rik	0610007K21Rik; 0610012J07Rik
Mus musculus	Riken	ILMN_206683	ILMN_206683	A230003K02RIK	ri|A230003K02|PX00316O09|AK079520|2474					AK079520	A230003K02Rik		ILMN_1247531	002650050	S	1908	CAGGAGGGACAAACCACAGTAAGAGACAGCAAGACCAGCTAACACCAGAG										
Mus musculus	RefSeq	ILMN_207484	ILMN_207484	DST	XM_149027.1	XM_149027.1			20845203	XM_149027.1	Dst		ILMN_2587817	001770743	I	104	ATCACTCTGTTCAAGGTGCTTCCACCAGAAGGCCTAGCTCCGGGAACGCG						Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]	The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IMP]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217346	ILMN_216700	ITGB1BP1	NM_008403.4	NM_008403.4		16413	145966819	NM_008403.4	Itgb1bp1	NP_032429.1	ILMN_1213848	003120328	S	1800	CCATCAGGTCTGACTTGGGGGACGATGACTGAGAAATAGTGCGCAGACTA				12qA1.2	Mus musculus integrin beta 1 binding protein 1 (Itgb1bp1), mRNA.		Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence ISO]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence ISO]; Interacting selectively with an integrin [goid 5178] [evidence ISO]	AU019480; bodenin; AI449260	AU019480; bodenin; AI449260
Mus musculus	MEEBO	ILMN_191257	ILMN_191257	2310005C01RIK	scl27316.1.344_21						2310005C01Rik		ILMN_2477527	004540309	S	17	GGTCTCAGGGGCCATCAAACTGTCTACCTGATGCTGTGGTTTCTGCTTAG										
Mus musculus	Riken	ILMN_202911	ILMN_202911	HCCS	ri|4732415N24|PX00050M23|AK028608|3360					AK028608	Hccs		ILMN_1246271	006660291	S	3029	GGACAGGCACAATAAACAGTGGGTCTGACCCCGAACTCAGTCTGAATCCC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]		Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: holocytochrome c = apocytochrome c + heme [goid 4408] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213058	ILMN_213058	BC023835	scl30490.6.1_1				31981985	NM_172116	BC023835		ILMN_2771374	004610403	S	742	CCATGGTCTCCTGTACTGACACTCGATGGGACACTCAAGCCTCCATCAGG										
Mus musculus	Riken	ILMN_204275	ILMN_204275	9630025H21RIK	ri|9630025H21|PX00115H05|AK035994|2174					AK035994	9630025H21Rik		ILMN_1254970	005360189	S	1839	GGCCTTGGAATCATTAGTTAGATGCTCATGAATCAACCCACCCTGCCCAC										
Mus musculus	RefSeq	ILMN_211250	ILMN_211250	BC002059	NM_145397.1	NM_145397.1		213811	21703793	NM_145397.1	BC002059	NP_663372.1	ILMN_1245533	001850048	S	1321	GTTAACATTGACCTTCTAAGGCATGAAACATAGTTGTGAGATTTTAGTGG	17	+	17110949-17110998	17qA3.1	Mus musculus cDNA sequence BC002059 (BC002059), mRNA.				MGC6110	MGC6110
Mus musculus	RefSeq	ILMN_219455	ILMN_239042	B230208H17RIK	NM_001024616.1	NM_001024616.1		227624	85986572	NM_001024616.1	B230208H17Rik	NP_001019787.2	ILMN_1223447	000520338	S	1885	GCCCAGATGCTGTCCTTCGTCATGGATGACCCAGACTTTGAAAGTGATGA	2	-	25440849-25440898	2qA3	Mus musculus RIKEN cDNA B230208H17 gene (B230208H17Rik), mRNA. XM_897418 XM_897429 XM_897439 XM_897452 XM_897459 XM_914394 XM_923230 XM_923233 XM_923237 XM_923239 XM_923241 XM_923243 XM_923244 XM_923249 XM_923252	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	RP23-464C2.8	RP23-464C2.8
Mus musculus	RefSeq	ILMN_190660	ILMN_232146	ROD1	NM_144904.1	NM_144904.1		230257	21450284	NM_144904.1	Rod1	NP_659153.1	ILMN_1257327	006100121	S	3219	GTGAGAACCTGATTTTCTCTGTTAATGCGACTTCATTACAGATAGCCCAC	4	-	59488261-59488310	4qB3	Mus musculus ROD1 regulator of differentiation 1 (S. pombe) (Rod1), transcript variant 1, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	5830471K22Rik; C86549; AI462022; AW107884; MGC11742; AA407443	5830471K22Rik; C86549; AI462022; AW107884; MGC11742; AA407443
Mus musculus	RefSeq	ILMN_215081	ILMN_215081	KCNC4	NM_145922.2	NM_145922.2		99738	118130234	NM_145922.2	Kcnc4	NP_666034.1	ILMN_2771095	004010465	S	2933	GTGCCCTGTCTGCATGCCCTCAACTGTCATGCTGTGCTCGAGTACCAATA	3	-	107241251-107241300	3qF2.3	Mus musculus potassium voltage gated channel, Shaw-related subfamily, member 4 (Kcnc4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KSHIIIC; Kcr2-4; Kv3.4; AI850292	KSHIIIC; Kcr2-4; Kv3.4; AI850292
Mus musculus	RefSeq	ILMN_215081	ILMN_215081	KCNC4	NM_145922.2	NM_145922.2		99738	118130234	NM_145922.2	Kcnc4	NP_666034.1	ILMN_1242025	003990541	S	1910	CAAGACGCCCTCTCGTCCAACTATGCCCACGCTGAAGTCCTCACCCTCTC	3	-	107242274-107242323	3qF2.3	Mus musculus potassium voltage gated channel, Shaw-related subfamily, member 4 (Kcnc4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KSHIIIC; Kcr2-4; Kv3.4; AI850292	KSHIIIC; Kcr2-4; Kv3.4; AI850292
Mus musculus	RefSeq	ILMN_217189	ILMN_217189	NLGN2	NM_198862.2	NM_198862.2		216856	56699424	NM_198862.2	Nlgn2	NP_942562.2	ILMN_2972478	003170592	S	4857	GACCCCACGATACAGCCACGGACTCCAATGCCCGGCCCCTTTCCAAATAA	11	-	69636720-69636769	11qB3	Mus musculus neuroligin 2 (Nlgn2), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence ISO]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IGI]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC67386; RP23-422L16.24	MGC67386; RP23-422L16.24
Mus musculus	Riken	ILMN_205079	ILMN_205079	D630001M21RIK	ri|D630001M21|PX00195F06|AK052593|2689					AK052593	D630001M21Rik		ILMN_1245569	003190025	S	2578	AGTGGTAGTGCACACTGTTATCCCAGCACACAGGAGACAAAGGGAGGCAG										
Mus musculus	RefSeq	ILMN_208956	ILMN_208956	CCL21A	NM_011124.4	NM_011124.4		18829	118130240	NM_011124.4	Ccl21a	NP_035254.1	ILMN_1213286	001710612	S	636	ATCACATCTGCACGGCCATCCCTTTCTTACCTGGCGGAGCTGCCTTCCCT	4	-	42786574-42786623	4qA5	Mus musculus chemokine (C-C motif) ligand 21A (Ccl21a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	Scya21b; 6CKBAC2; plt; AW987545; 6Ckine; SLC; MGC107632; ALP; CKb9; Tca4; Scya21	Scya21b; 6CKBAC2; plt; AW987545; 6Ckine; SLC; MGC107632; ALP; CKb9; Tca4; Scya21
Mus musculus	RefSeq	ILMN_209206	ILMN_209206	HOMER1	NM_147176.1	NM_147176.1		26556	22550099	NM_147176.1	Homer1	NP_671705.1	ILMN_2593584	005570041	S	33	ATTTTTATTCAAGTGCACGTCGCGTTGGGTTGCACGCTCCACCCCCAGGG	13	+	94074786-94074835	13qC3	Mus musculus homer homolog 1 (Drosophila) (Homer1), transcript variant L, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [evidence IDA]	The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor coupled to effectors through GTP-binding proteins [goid 7216] [evidence TAS]; A process whereby force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control [goid 3009] [evidence IMP]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel [goid 32236] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SYN47; Ves-1; PSD-Zip45	SYN47; Ves-1; PSD-Zip45
Mus musculus	RefSeq	ILMN_230277	ILMN_230277	FRRS1	NM_009146.1	NM_009146.1		20321	6677898	NM_009146.1	Frrs1	NP_033172.1	ILMN_3098120	006270112	A	1276	CCACGGTCAGCATTGGAGTCCTGGTTGCCCGGTTCTTCAGATCTGTTTGG	3	+	116888709-116888758	3qG1	Mus musculus ferric-chelate reductase 1 (Frrs1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3,4-dihydroxyphenethylamine + ascorbate + O2 = noradrenaline + dehydroascorbate + H2O [goid 4500] [evidence IEA]	Sdfr2; AI131732	Sdfr2; AI131732
Mus musculus	MEEBO	ILMN_191114	ILMN_191114	TTC7	scl50399.22_481				30842799	NM_028639	Ttc7		ILMN_1257001	006400040	S	16	GTGCCTGACAGTGACTTTGGAAATTGAATAAAAGACCCTTGGAGGGGGAC							The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196732	ILMN_196732	HIST1H2AB	NM_175660.2	NM_175660.2		319172	87299610	NM_175660.2	Hist1h2ab	NP_783591.2	ILMN_2704873	006100113	S	423	GGCCAAGGGGAAGTAATCTGGCGATTGTCTGTACTGCCCAGTTGAAAGTT	13	+	23843379-23843394:23843395-23843428	13qA3.1	Mus musculus histone cluster 1, H2ab (Hist1h2ab), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2A.1; H2a-53	H2A.1; H2a-53
Mus musculus	RefSeq	ILMN_193358	ILMN_257749	LOC545547	XM_622329.4	XM_622329.4		545547	149251284	XM_622329.4	LOC545547	XP_622329.3	ILMN_1238230	002320112	S	102	CCTCCAAAATGCCAGACCCCAAAATGCCCTCCAAAGTGTCCCCCAAAATG	3	-	92593293-92593342	3qF1	PREDICTED: Mus musculus hypothetical LOC545547 (LOC545547), mRNA.					
Mus musculus	Riken	ILMN_203282	ILMN_203282	9430065L19RIK	ri|9430065L19|PX00110E05|AK034952|1991					AK034952	9430065L19Rik		ILMN_1229312	006060681	S	1123	ATCGAGATCCCGCTCAAGGTCGAGATCAAGATCCAGGTCTATTTCACGAC										
Mus musculus	RefSeq	ILMN_197810	ILMN_197810	LOC381025	XM_354935.1	XM_354935.1			38078385	XM_354935.1	LOC381025		ILMN_1258152	003120458	S	837	CCCGGACACAGCGGAGGAAGGTAAGCATGGGGTAGGAGGGCCATACCTCA										
Mus musculus	RefSeq	ILMN_220620	ILMN_220620	PRL3C1	NM_013766.1	NM_013766.1		27372	7305406	NM_013766.1	Prl3c1	NP_038794.1	ILMN_2724496	000520079	S	692	CTAAAAGTGCAAAGTCCTTATTAGTGGTATTTGCTACTAAGATGGCCCAC	13	+	27295487-27295536	13qA3.1	Mus musculus prolactin family 3, subfamily c, member 1 (Prl3c1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	decidualin; Prlpj; PLP-J; Prlpi	decidualin; Prlpj; PLP-J; Prlpi
Mus musculus	MEEBO	ILMN_195911	ILMN_195911	9130403I23RIK	scl23399.1_42						9130403I23Rik		ILMN_1245946	001340184	S	1	GGATGTGGCTCAAATAAGTCTGGGTTCTACTCCCACCACCACTAGAAAGC										
Mus musculus	RefSeq	ILMN_254318	ILMN_254318	UPRT	NM_001081189.1	NM_001081189.1		331487	124487134	NM_001081189.1	Uprt	NP_001074658.1	ILMN_2936221	004760273	S	742	GTGGTGAGGCAATGGAACAAGGTTTGCGAGACTGCTGTCGATCCATACGG	X	+	101694803-101694805:101697084-101697130	XqD	Mus musculus uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) (Uprt), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Gm774	Gm774
Mus musculus	RefSeq	ILMN_211461	ILMN_214307	OSBPL8	NM_175489.3	NM_175489.3		237542	51243033	NM_175489.3	Osbpl8	NP_780698.2	ILMN_2632008	007040343	S	3336	GCCAGAACACTTGTATGAGACTGTGCCTACACGTGAGTATCGTAGACCCA	10	+	110730487-110730536	10qD1	Mus musculus oxysterol binding protein-like 8 (Osbpl8), transcript variant 1, mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]		D330025H14Rik; AA536995; AA536976; C730029P18Rik; ORP-8	D330025H14Rik; AA536995; AA536976; C730029P18Rik; ORP-8
Mus musculus	RefSeq	ILMN_211461	ILMN_214307	OSBPL8	NM_175489.3	NM_175489.3		237542	51243033	NM_175489.3	Osbpl8	NP_780698.2	ILMN_2616135	002350202	S	6967	TGTAGAATTCTCTTAAGGTGCATAGTAAATGTATAGATAGTCACAGGCGG	10	+	110734118-110734167	10qD1	Mus musculus oxysterol binding protein-like 8 (Osbpl8), transcript variant 1, mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]		D330025H14Rik; AA536995; AA536976; C730029P18Rik; ORP-8	D330025H14Rik; AA536995; AA536976; C730029P18Rik; ORP-8
Mus musculus	RefSeq	ILMN_214307	ILMN_214307	OSBPL8	NM_175489.3	NM_175489.3		237542	51243033	NM_175489.3	Osbpl8	NP_780698.2	ILMN_3132666	005220360	A	6896	GCACTAGCATTGGTCAGTTTTGTATGATAGGATGTAAGTGTGTTCTCACC	10	+	110734047-110734096	10qD1	Mus musculus oxysterol binding protein-like 8 (Osbpl8), transcript variant 1, mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]		D330025H14Rik; AA536995; AA536976; C730029P18Rik; ORP-8	D330025H14Rik; AA536995; AA536976; C730029P18Rik; ORP-8
Mus musculus	Riken	ILMN_205830	ILMN_205830	A530060E10RIK	ri|A530060E10|PX00142I24|AK041006|3007					AK041006	A530060E10Rik		ILMN_1252301	004480195	S	2826	TAGTGTCTGCTGGGACTTTCCCAAGATCAACAGGATCTAGAAGATTCCAG										
Mus musculus	Riken	ILMN_206458	ILMN_206458	D130080B17RIK	ri|D130080B17|PX00187A09|AK084054|1915					AK084054	D130080B17Rik		ILMN_1255720	003120202	S	706	ACGTACTGCTTCGGTTACAGTGATTGGCGGGTCTCAGCGGACTCACCGAG										
Mus musculus	MEEBO	ILMN_213990	ILMN_213990	NGFG	scl0018050.1_305				52851402	NM_008693	Ngfg		ILMN_2643044	005720491	S	769	CTGGATAAAAGACACTATGGCAAAAAACCCCTAAGTATCACAACTGTCTG										
Mus musculus	Riken	ILMN_205333	ILMN_205333	PDE7B	ri|A530032L19|PX00140H01|AK040876|2737					AK040876	Pde7b		ILMN_1242836	003060707	S	2596	CAACCCAGAATGCACAATGGTGTGTAACTATGCCCTTAAGGACCTTGCAC							The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence IDA]		
Mus musculus	MEEBO	ILMN_189504	ILMN_189504	SCL0001923.1_57	scl0001923.1_57	AK077565.1			26097412	AK077565.1	scl0001923.1_57		ILMN_1245562	002060438	S	20	CTCCTGAAGGGGTCAGCCTGGCCGTAGTATCTGGGACTGCATCCTCCTTT										
Mus musculus	RefSeq	ILMN_200017	ILMN_200017	LOC383104	XM_356878.1	XM_356878.1			38079863	XM_356878.1	LOC383104		ILMN_2537299	005820746	S	144	GGAAGCCAAACCTGGGCTCCAACTTGTTATGAACAGTGGGAAGTATGTGC										
Mus musculus	RefSeq	ILMN_213301	ILMN_213301	ART5	NM_007491.1	NM_007491.1		11875	25092604	NM_007491.1	Art5	NP_031517.1	ILMN_2890301	006040408	S	1659	GAAGGGGCTTTGAACGGCTGCAGGAAGCAGGAGTGTGGTTCTGGTTCCAG	7	-	109245534-109245583	7qE3	Mus musculus ADP-ribosyltransferase 5 (Art5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IEA]; Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose [goid 3953] [evidence IDA]	MGC151200; MGC151226; Yac-2	MGC151200; MGC151226; Yac-2
Mus musculus	RefSeq	ILMN_197949	ILMN_197949	LOC208166	XM_156182.2	XM_156182.2			38079803	XM_156182.2	LOC208166		ILMN_1245508	002140324	S	1543	GGGGGGCTTTGTATGGATGAACCCCGAGTTCCATCCACATTGTTGCAAAT										
Mus musculus	RefSeq	ILMN_188123	ILMN_188123	UPK3B	NM_175309.3	NM_175309.3		100647	31342372	NM_175309.3	Upk3b	NP_780518.1	ILMN_2941712	006270670	S	1854	GACACGGCCTCGGGGAAAGCTGATTGTAACTTTGGAGGACTCTACCTTGC	5	+	136329438-136329487	5qG2	Mus musculus uroplakin 3B (Upk3b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AI957187; PMS2L14; P35; UpIIIb; AI447729	AI957187; PMS2L14; P35; UpIIIb; AI447729
Mus musculus	RefSeq	ILMN_188123	ILMN_188123	UPK3B	NM_175309.3	NM_175309.3		100647	31342372	NM_175309.3	Upk3b	NP_780518.1	ILMN_2941715	004040243	S	1591	AGTTATATGAGGTTCAGGCCACCTTCCGTCTGACCCAACAACCAGGGGTG	5	+	136329175-136329224	5qG2	Mus musculus uroplakin 3B (Upk3b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AI957187; PMS2L14; P35; UpIIIb; AI447729	AI957187; PMS2L14; P35; UpIIIb; AI447729
Mus musculus	RefSeq	ILMN_188123	ILMN_188123	UPK3B	NM_175309.3	NM_175309.3		100647	31342372	NM_175309.3	Upk3b	NP_780518.1	ILMN_2941714	000520333	S	1946	ACTGCTGGGGAGATGTCATGCTCTCAAACTATCCTCGGAGTCACTCTCCC	5	+	136329530-136329579	5qG2	Mus musculus uroplakin 3B (Upk3b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AI957187; PMS2L14; P35; UpIIIb; AI447729	AI957187; PMS2L14; P35; UpIIIb; AI447729
Mus musculus	MEEBO	ILMN_193533	ILMN_193533	TBL1X	scl54819.15_251				33468968	NM_020601	Tbl1x		ILMN_1215596	004760402	S	20	GGTACACATTTACTTCAGCAGCCAATGGGAACACAGTGAAGAAGCCACCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_211155	ILMN_211155	RFC4	scl48631.9_71				21703947	NM_145480	Rfc4		ILMN_2613118	003940458	S	1109	CCTTTGTGCAACTGTGATGCAGCAGCTAACTCAGAACTGTTAGAGGCTTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]		
Mus musculus	RefSeq	ILMN_227994	ILMN_227994	4930455F23RIK	NM_029115.1	NM_029115.1		74895	30794177	NM_029115.1	4930455F23Rik	NP_083391.1	ILMN_2908953	005900341	S	1778	GGCCCCATGTCTCGGCGTCACTACAGATTGTGGGAGTAGGATTTGCCTTT	1	+	166124410-166124459	1qH2.2	Mus musculus RIKEN cDNA 4930455F23 gene (4930455F23Rik), mRNA.				AI427889	AI427889
Mus musculus	RefSeq	ILMN_223829	ILMN_258932	PTPRU	NM_011214.2	NM_011214.2		19273	134031954	NM_011214.2	Ptpru	NP_035344.2	ILMN_2770076	003170735	S	5021	CTGGCCCAGTATATGCAGAATGATATACTTCAGCTCCCTCTTCCCTGGCC	4	-	131324775-131324824	4qD2.3	Mus musculus protein tyrosine phosphatase, receptor type, U (Ptpru), transcript variant 1, mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ptprl; PTP; RPTPlambda	Ptprl; PTP; RPTPlambda
Mus musculus	RefSeq	ILMN_184578	ILMN_310478	TLE3	NM_001083928.1	NM_001083928.1		21887	145207949	NM_001083928.1	Tle3	NP_001077397.1	ILMN_2615276	007210647	S	2479	CCGGCAGATCAATACGCTCAGCCATGGAGAGGTGGTATGTGCTGTGACCA				9qB	Mus musculus transducin-like enhancer of split 3, homolog of Drosophila E(spl) (Tle3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]		mKIAA1547; ESG; Grg3a; Grg3b; 2610103N05Rik	mKIAA1547; ESG; Grg3a; Grg3b; 2610103N05Rik
Mus musculus	RefSeq	ILMN_184578	ILMN_310478	TLE3	NM_001083928.1	NM_001083928.1		21887	145207949	NM_001083928.1	Tle3	NP_001077397.1	ILMN_2757607	006250300	S	3376	TCTAACAGGCCTGTCAAACTCTGGGAGAGACACCCACGTGGCCCTGACAG				9qB	Mus musculus transducin-like enhancer of split 3, homolog of Drosophila E(spl) (Tle3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]		mKIAA1547; ESG; Grg3a; Grg3b; 2610103N05Rik	mKIAA1547; ESG; Grg3a; Grg3b; 2610103N05Rik
Mus musculus	RefSeq	ILMN_184578	ILMN_310478	TLE3	NM_001083928.1	NM_001083928.1		21887	145207949	NM_001083928.1	Tle3	NP_001077397.1	ILMN_1244307	002710338	S	4281	GGTGCACACTCAATCATTGTGATGAGGAATGGAAGTTCTAGGGAACCCCC				9qB	Mus musculus transducin-like enhancer of split 3, homolog of Drosophila E(spl) (Tle3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]		mKIAA1547; ESG; Grg3a; Grg3b; 2610103N05Rik	mKIAA1547; ESG; Grg3a; Grg3b; 2610103N05Rik
Mus musculus	Riken	ILMN_204402	ILMN_204402	A130094J16RIK	ri|A130094J16|PX00125F07|AK038304|1546					AK038304	A130094J16Rik		ILMN_1254819	003450070	S	1171	CTGTGGCCTGCCTGTCCCCGAGAAGGAGAGTAAATGAGACCCTCAAGGAC										
Mus musculus	RefSeq	ILMN_216205	ILMN_216205	CENPK	NM_181061.4	NM_181061.4		60411	146198823	NM_181061.4	Cenpk	NP_851406.1	ILMN_2668436	004390605	S	1029	GAAACTATGTCGATATTTCTGATTTTCCCTAGTTTAAAACTAAAACCTTT				13qD1	Mus musculus centromere protein K (Cenpk), transcript variant 2, mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Solzt; Cenp-K; C530004N04Rik; BB232189; Solt; B130045K24Rik	Solzt; Cenp-K; C530004N04Rik; BB232189; Solt; B130045K24Rik
Mus musculus	RefSeq	ILMN_216048	ILMN_216048	ST8SIA4	NM_009183.1	NM_009183.1		20452	6677968	NM_009183.1	St8sia4	NP_033209.1	ILMN_1223948	000780500	S	2991	TATATGTATTCATATTCTGGACAAGGATAGTCATGTAGTACAGTTACCAA	1	-	97486631-97486680	1qD	Mus musculus ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 (St8sia4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IDA]	Siat8d; PST; ST8SiaIV; PST-1	Siat8d; PST; ST8SiaIV; PST-1
Mus musculus	RefSeq	ILMN_216048	ILMN_216048	ST8SIA4	NM_009183.1	NM_009183.1		20452	6677968	NM_009183.1	St8sia4	NP_033209.1	ILMN_2784230	003780187	S	6455	GCGGTTTTTTGATTGTTGGTCTAGGTTGTGTGTTTCTCTTTTATGTAGCG				1qD	Mus musculus ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 (St8sia4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IDA]	Siat8d; PST; ST8SiaIV; PST-1	Siat8d; PST; ST8SiaIV; PST-1
Mus musculus	RefSeq	ILMN_216048	ILMN_216048	ST8SIA4	NM_009183.1	NM_009183.1		20452	6677968	NM_009183.1	St8sia4	NP_033209.1	ILMN_2671195	003830553	S	6632	GCCTTTCTTATACCATCTGTGGAAAGGAAGGATGAAGCTTACTCTGTAGG				1qD	Mus musculus ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 (St8sia4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IDA]	Siat8d; PST; ST8SiaIV; PST-1	Siat8d; PST; ST8SiaIV; PST-1
Mus musculus	MEEBO	ILMN_186181	ILMN_186181	TRPC5	scl53756.11.1_4	NM_009428.1			6678434	NM_009428.1	Trpc5		ILMN_2433320	006840653	S	3	ACTGAAGGGGTCCTGCCCCTAATGAGCAGAGGTGCGGTCGGGTGCTTTAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_206081	ILMN_206081	GAA	ri|E230015H02|PX00209F09|AK054057|1370					AK054057	Gaa		ILMN_1255883	007050368	S	1091	GAGAAAGTGGTTTACCTCACAGGTTCTAGGCCATGCTCCATCACTGCCGG						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IMP]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5980] [evidence IMP]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IMP]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IMP]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; A process whereby force is generated within involuntary skeletal muscle tissue, resulting in a change in muscle geometry. This process occurs in the diaphragm. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The diaphragm is a striated muscle that is necessary for the process of respiratory gaseous exchange [goid 2086] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IMP]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IDA]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IMP]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IMP]		
Mus musculus	RefSeq	ILMN_188203	ILMN_188203	V1RI5	NM_134222.1	NM_134222.1		171256	21717752	NM_134222.1	V1ri5	NP_598983.1	ILMN_2450664	007400341	S	769	TTCACAGTGACACATGATTCTACGTTACTAAATATTAAAGTATTTTTAGA	13	+	23229122-23229171	13qA3.1	Mus musculus vomeronasal 1 receptor, I5 (V1ri5), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214051	ILMN_214051	NARS	NM_027350.2	NM_027350.2		70223	142378446	NM_027350.2	Nars	NP_081626.1	ILMN_1227163	006350386	S	2422	AAGACTTTGCACCTGAATCTTAGCCACCGTAGACAGCTACGTCATCCCTG	18	-	64659456-64659505	18qE1	Mus musculus asparaginyl-tRNA synthetase (Nars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn) [goid 4816] [evidence IEA]	AA960128; ASNRS; C78150; 3010001M15Rik	AA960128; ASNRS; C78150; 3010001M15Rik
Mus musculus	MEEBO	ILMN_213858	ILMN_213858	TAF12	scl0002627.1_6				18044301	BC019668	Taf12		ILMN_2641514	003360484	S	510	GTGGAACATGTGGATCCCAGGCTTTGGCTCTGAGGAAATCCGACCCTACA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	 [goid 16986] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218193	ILMN_218193	PSMD4	NM_008951.1	NM_008951.1		19185	6679504	NM_008951.1	Psmd4	NP_032977.1	ILMN_1228630	001440750	S	1176	GGACTGTAAAGACGGGGTTGGATAGAGGCTTAGATGTGCTCTGCTGCCTT	3	-	94836653-94836702	3qF2.1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 (Psmd4), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mcb1; Af1; angiocidin	Mcb1; Af1; angiocidin
Mus musculus	RefSeq	ILMN_199942	ILMN_199942	LOC384086	XM_357411.1	XM_357411.1			38079095	XM_357411.1	LOC384086		ILMN_1225867	006650114	S	563	CCCAGGAAGCTGGTGGTAGATGGGCTGGCACAGAAGTGGTGAAGAGGCTA										
Mus musculus	RefSeq	ILMN_219134	ILMN_219134	AI450540	NM_145505.2	NM_145505.2		226252	31542080	NM_145505.2	AI450540	NP_663480.2	ILMN_2704690	002470609	S	5788	GCAGTGCTGTGAAGGTCTGGATTCCCAGGCCACCGATGAGGAAGCTCTTC	19	+	57442673-57442722	19qD2	Mus musculus expressed sequence AI450540 (AI450540), mRNA.				mKIAA1600	mKIAA1600
Mus musculus	RefSeq	ILMN_223462	ILMN_223462	RPPH1	NR_002142.1	NR_002142.1		85029	46402165	NR_002142.1	Rpph1		ILMN_1246744	001510647	S	49	CTCACCTCAGCCATTGAACTCGCACTGCTGGCCGTGAGTCTGTTCCAAGC	14	+	51427170-51427219	14qC1	Mus musculus ribonuclease P RNA component H1 (Rpph1), non-coding RNA.				Rpr; Rmrp5; Parp2; H1RNA	Rpr; Rmrp5; Parp2; H1RNA
Mus musculus	Riken	ILMN_202106	ILMN_202106	2810031B20RIK	ri|2810031B20|ZX00065M11|AK012845|627					AK012845	2810031B20Rik		ILMN_1251750	004060465	S	7	AAAGAACTTCAAGCGAGGTCCGAGTTTGCCTTCTGGGCTTGTGCTCGGCC										
Mus musculus	RefSeq	ILMN_212091	ILMN_212091	ACOT4	NM_134247.2	NM_134247.2		171282	31543518	NM_134247.2	Acot4	NP_599008.2	ILMN_2622613	001990390	S	1551	GGTTATTCTACTACCAGCCTGTGCTTGTTACAGATTCGGCTATATGTGAT	12	+	85384899-85384948	12qD1	Mus musculus acyl-CoA thioesterase 4 (Acot4), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The chemical reactions and pathways involving fatty acids with a chain length of less than 8 carbons [goid 46459] [evidence IDA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IDA]; The chemical reactions and pathways involving succinyl-CoA, a compound composed of the univalent acyl group 3-carboxypropanoyl, derived from succinic acid by loss of one OH group, linked to coenzyme A [goid 6104] [evidence IDA]; The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing two carboxyl (COOH) groups or anions (COO-) [goid 43648] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence TAS]	PTE-Ib; Pte1b; B430212I04Rik; Pte2b	PTE-Ib; Pte1b; B430212I04Rik; Pte2b
Mus musculus	RefSeq	ILMN_222963	ILMN_222963	CRELD2	NM_029720.1	NM_029720.1		76737	21313277	NM_029720.1	Creld2	NP_083996.1	ILMN_2983948	004860079	S	896	GCCGGCTACACCAAGGAGAGTGGACAGTGCACAGATATAGATGAATGCTC	15	+	88652477-88652509:88652916-88652932	15qE3	Mus musculus cysteine-rich with EGF-like domains 2 (Creld2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	C85758; 5730592L21Rik	C85758; 5730592L21Rik
Mus musculus	RefSeq	ILMN_185758	ILMN_185758	RNF114	NM_030743.5	NM_030743.5		81018	133892281	NM_030743.5	Rnf114	NP_109668.2	ILMN_1238612	003120259	S	1044	ATGTCTGAAGCCGAAGAAACCTGTCTGTGGGGTGTGTCGCAGCGCTCTGG	2	+	167332571-167332620	2qH3	Mus musculus ring finger protein 114 (Rnf114), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI225886; Zfp228; AW549494; 1110008J21Rik; Znf228	AI225886; Zfp228; AW549494; 1110008J21Rik; Znf228
Mus musculus	RefSeq	ILMN_188510	ILMN_257424	TRIM30	NM_009099.2	NM_009099.2		20128	125347378	NM_009099.2	Trim30	NP_033125.2	ILMN_1229630	001110543	S	3436	GGATATTAGATCCTGGAAGCTGCCGCCAAGAATATTCTAATGTGTTGTGG	7	-	111557824-111557873	7qE3	Mus musculus tripartite motif-containing 30 (Trim30), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rpt-1; Rpt1	Rpt-1; Rpt1
Mus musculus	MEEBO	ILMN_195086	ILMN_195086	SIX3	scl50422.4.1_17				33859621	NM_011381	Six3		ILMN_2764616	004780097	S	1680	AGAAGGGCTTTTTTTATCAGAGCCAGCGCTGTGTGAGCATGCCCCTGGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain [goid 21797] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]; The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain [goid 21797] [evidence IGI]; The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex [goid 21536] [evidence IGI]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_195086	ILMN_195086	SIX3	scl50422.4.1_17				33859621	NM_011381	Six3		ILMN_1235642	003460039	S	15	ATGCGCTCGCTGGCCGAGCCCGGCTGCCCCACGCACGGCTCAAGCAGAGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain [goid 21797] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]; The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain [goid 21797] [evidence IGI]; The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex [goid 21536] [evidence IGI]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_201879	ILMN_201879	4921537F17RIK	ri|4921537F17|PX00015C05|AK015008|2245					AK015008	4921537F17Rik		ILMN_1247508	005290497	S	1958	ACTGCGCCAAGAAGCATCCACGTGTGATCTCAGGGCATTCAACAGAGGAG										
Mus musculus	RefSeq	ILMN_211807	ILMN_255672	2210010C17RIK	NM_027308.2	NM_027308.2		70080	142387586	NM_027308.2	2210010C17Rik	NP_081584.1	ILMN_1229099	000780196	S	1650	ACAGTCTTGCTCTTAAGGAATTCACGTGCTGTGTCTTCTTCACAGCCCCC	7	-	20522849-20522898	7qA3	Mus musculus RIKEN cDNA 2210010C17 gene (2210010C17Rik), mRNA. XM_919835 XM_986748 XM_986778 XM_986813					
Mus musculus	RefSeq	ILMN_217756	ILMN_217756	CHST2	NM_018763.1	NM_018763.1		54371	9055185	NM_018763.1	Chst2	NP_061233.1	ILMN_2687165	002060544	S	2062	GCACTTGCTGTCAACGTTTTGAGTCAGTGCATTTCAAGGAACAGCCCTCA	9	-	95304927-95304976	9qE3.3	Mus musculus carbohydrate sulfotransferase 2 (Chst2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IDA]	AW121776; Gn6st; Chts2; C130041E03Rik; GlcNAc6ST; AI428561; GST-2	AW121776; Gn6st; Chts2; C130041E03Rik; GlcNAc6ST; AI428561; GST-2
Mus musculus	RefSeq	ILMN_228843	ILMN_228843	FKTN	NM_139309.4	NM_139309.4		246179	146149152	NM_139309.4	Fktn	NP_647470.1	ILMN_3161480	002230554	S	2688	TTCTCAAAATACACCCATGAGTAGGTTGGGGTAGCTGTGCACTCTCAGTG				4qB2	Mus musculus fukutin (Fktn), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Fukutin; D830030O17Rik	Fukutin; D830030O17Rik
Mus musculus	RefSeq	ILMN_212058	ILMN_212058	GUF1	NM_172711.2	NM_172711.2		231279	91064874	NM_172711.2	Guf1	NP_766299.1	ILMN_2677353	000520097	S	1611	TTGAATGAAATTGTGGTAGATTTTTATGACTCTTTGAAGTCTCTCTCTTC	5	+	69958439-69958488	5qC3.1	Mus musculus GUF1 GTPase homolog (S. cerevisiae) (Guf1), mRNA.			Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	4631409J12; AA407526	4631409J12; AA407526
Mus musculus	RefSeq	ILMN_212058	ILMN_212058	GUF1	NM_172711.2	NM_172711.2		231279	91064874	NM_172711.2	Guf1	NP_766299.1	ILMN_1221498	001190497	S	1948	CCCGGAAAATGAAACTTCTGAAGAGACAGTCCGAAGGGAAAAAGAAGCTG	5	+	69962839-69962888	5qC3.1	Mus musculus GUF1 GTPase homolog (S. cerevisiae) (Guf1), mRNA.			Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	4631409J12; AA407526	4631409J12; AA407526
Mus musculus	RefSeq	ILMN_217507	ILMN_217507	AR	NM_013476.3	NM_013476.3		11835	118129906	NM_013476.3	Ar	NP_038504.1	ILMN_2684075	007000292	S	2806	GCACTACTTCTCTGCAGTGCCTTGGGGGAAATTCCTCTACTGATGTACAG	X	+	95512293-95512342	XqC3	Mus musculus androgen receptor (Ar), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The determination of sex and sexual phenotypes in a male organism's soma [goid 19102] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that modulates the activity of an enzyme [goid 50790] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with an androgen to initiate a change in cell activity [goid 4882] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Tfm; AW320017	Tfm; AW320017
Mus musculus	RefSeq	ILMN_223535	ILMN_223535	OLFR5	NM_146914.1	NM_146914.1		18349	22165409	NM_146914.1	Olfr5	NP_667125.1	ILMN_2765366	002060167	S	648	CACGACTATGGCCTCCTATGTGGCTATTGGCAGGGCAGTTCTGCGCATGC	7	-	6433168-6433217	7qA1	Mus musculus olfactory receptor 5 (Olfr5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR103-8; MGC123608; ORL120	MOR103-8; MGC123608; ORL120
Mus musculus	RefSeq	ILMN_216927	ILMN_216927	GSPT1	NM_146066.1	NM_146066.1		14852	22203748	NM_146066.1	Gspt1	NP_666178.1	ILMN_2791578	000620747	S	2102	CCCAAGATTTTGCCCCCCTTTCAAACTTCGCTTCCTTGGACAGATTTGGC	16	-	11220678-11220727	16qA1	Mus musculus G1 to S phase transition 1 (Gspt1), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	AV307676; AI326449; MGC36735; G1st; Gst-1; MGC36230; C79774	AV307676; AI326449; MGC36735; G1st; Gst-1; MGC36230; C79774
Mus musculus	RefSeq	ILMN_220405	ILMN_220405	SERPINB9D	NM_011460.1	NM_011460.1		20726	33468934	NM_011460.1	Serpinb9d	NP_035590.1	ILMN_2919035	003930070	S	1642	GTAAGCTCTCAGGCTCAGGAAAATGAAACCTTAACCTTCTCAGGGAGTAG	13	+	33210986-33211035	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 9d (Serpinb9d), mRNA.				ovalbumin; Spi9; AT2	ovalbumin; Spi9; AT2
Mus musculus	RefSeq	ILMN_220405	ILMN_220405	SERPINB9D	NM_011460.1	NM_011460.1		20726	33468934	NM_011460.1	Serpinb9d	NP_035590.1	ILMN_2919034	007610184	S	1581	GAAAGAACCCATGGAACGGGAAGCTTTCCTAAACTGCGTGCACCACACAG	13	+	33210925-33210974	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 9d (Serpinb9d), mRNA.				ovalbumin; Spi9; AT2	ovalbumin; Spi9; AT2
Mus musculus	Riken	ILMN_202204	ILMN_202204	1700095J19RIK	ri|1700095J19|ZX00077J19|AK007085|568					AK007085	1700095J19Rik		ILMN_2547803	003360600	S	134	CTTTAGAAATGCAGACAGGCAGACTTTCTGAAAGGCTTGCCCGTCTACAA										
Mus musculus	RefSeq	ILMN_219463	ILMN_219463	ARHGEF10	NM_172751.2	NM_172751.2		234094	111378387	NM_172751.2	Arhgef10	NP_766339.2	ILMN_2709220	001740110	S	1053	AGGCGCACTGTGAGGAAAAGATGAGAGGCTTGGTGGCCAGTACGGTGGGA	8	+	14942635-14942684	8qA1.1	Mus musculus Rho guanine nucleotide exchange factor (GEF) 10 (Arhgef10), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	6430549H08Rik; KIAA0294; mKIAA0294	6430549H08Rik; KIAA0294; mKIAA0294
Mus musculus	RefSeq	ILMN_197144	ILMN_197144	LOC227058	XM_129770.2	XM_129770.2			38074284	XM_129770.2	LOC227058		ILMN_1257733	004920706	S	1650	CTTCTGTGCTGGGCCAGCTTGTTATCTTGCCTTCCTGTATGAAGTTCGCA										
Mus musculus	RefSeq	ILMN_213635	ILMN_213635	ESRRB	NM_011934.3	NM_011934.3		26380	145301580	NM_011934.3	Esrrb	NP_036064.2	ILMN_1228497	007150017	S	4157	TTTTTAACCGGCAGTCCTTCGTGCTGTCTCACCCCCCTGTATGGACATGT				12qD2	Mus musculus estrogen related receptor, beta (Esrrb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The morphogenesis of trophectoderm cells [goid 1831] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The proliferation of cells in the trophectoderm [goid 1834] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	Err2; Estrrb; ERRb; Nr3b2	Err2; Estrrb; ERRb; Nr3b2
Mus musculus	Riken	ILMN_202920	ILMN_202920	4732462B05RIK	ri|4732462B05|PX00051O12|AK028848|2782					AK028848	4732462B05Rik		ILMN_1213708	002850750	S	2676	ATCCCAAGGATTCTGTGCACTGGAACTGTAGTGGTAGGGTCTCAGCATTG										
Mus musculus	RefSeq	ILMN_219811	ILMN_219811	NOS3	NM_008713.3	NM_008713.3		18127	142347596	NM_008713.3	Nos3	NP_032739.2	ILMN_2729153	006290328	S	3355	CTGCGGCGATGTCACTATGGCAACCAGCGTCCTGCAAACCGTGCAGAGAA	5	+	23889431-23889480	5qA3	Mus musculus nitric oxide synthase 3, endothelial cell (Nos3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases angiogenesis [goid 45766] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [evidence IMP]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51926] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43267] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hyperplasia [goid 14740] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; A process, occurring in smooth muscle, in which there is an increase in cell number by cell division, often leading to an increase in the size of an organ [goid 14806] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+ [goid 4517] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]	eNOS; Nos-3; ecNOS; 2310065A03Rik	eNOS; Nos-3; ecNOS; 2310065A03Rik
Mus musculus	RefSeq	ILMN_185850	ILMN_219811	NOS3	NM_008713.3	NM_008713.3		18127	142347596	NM_008713.3	Nos3	NP_032739.2	ILMN_2430542	002650070	S	3521	CCTCCTGGGTGCGCAATGTGAGTCCGAAAATGTCCTCGTGGTAGCGTTGC	5	+	23889690-23889739	5qA3	Mus musculus nitric oxide synthase 3, endothelial cell (Nos3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases angiogenesis [goid 45766] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [evidence IMP]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51926] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43267] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hyperplasia [goid 14740] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; A process, occurring in smooth muscle, in which there is an increase in cell number by cell division, often leading to an increase in the size of an organ [goid 14806] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+ [goid 4517] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]	eNOS; Nos-3; ecNOS; 2310065A03Rik	eNOS; Nos-3; ecNOS; 2310065A03Rik
Mus musculus	RefSeq	ILMN_219811	ILMN_219811	NOS3	NM_008713.3	NM_008713.3		18127	142347596	NM_008713.3	Nos3	NP_032739.2	ILMN_2713835	007570647	S	3484	CGAGGACATTTTCGGACTCACATTGCGCACCCAGGAGGTGACAAGCCGCA	5	+	23889653-23889702	5qA3	Mus musculus nitric oxide synthase 3, endothelial cell (Nos3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases angiogenesis [goid 45766] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [evidence IMP]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51926] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43267] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hyperplasia [goid 14740] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; A process, occurring in smooth muscle, in which there is an increase in cell number by cell division, often leading to an increase in the size of an organ [goid 14806] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+ [goid 4517] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]	eNOS; Nos-3; ecNOS; 2310065A03Rik	eNOS; Nos-3; ecNOS; 2310065A03Rik
Mus musculus	RefSeq	ILMN_212602	ILMN_212602	TESK2	NM_146151.3	NM_146151.3		230661	142361402	NM_146151.3	Tesk2	NP_666263.2	ILMN_2628330	001450110	S	2738	CTGTTCTTAAAGAGCCGCGATAAGAAATAACCAAAGAATGAAGTTGGTCA	4	+	116476570-116476619	4qD1	Mus musculus testis-specific kinase 2 (Tesk2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MGC29168	MGC29168
Mus musculus	RefSeq	ILMN_198517	ILMN_322087	LOC665539	XM_001477467.1	XM_001477467.1		665539	149256117	XM_001477467.1	LOC665539	XP_001477517.1	ILMN_1256406	005080035	S	1952	CCCTACTCCAATGTATTCTGTCTGCTATCTGGCTAGAAGTTTCTCCTCCC	7	+	9305192-9305241	7qA1	PREDICTED: Mus musculus similar to EC2-V2R pheromone receptor protein (LOC665539), mRNA.					
Mus musculus	RefSeq	ILMN_215123	ILMN_215123	ZFP790	NM_146185.1	NM_146185.1		233056	22122722	NM_146185.1	Zfp790	NP_666297.1	ILMN_2735766	001570468	S	3181	GAGCCCCACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTC	7	+	30615764-30615813	7qB1	Mus musculus zinc finger protein 790 (Zfp790), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	6330581L23Rik; MGC6654	6330581L23Rik; MGC6654
Mus musculus	RefSeq	ILMN_215123	ILMN_215123	ZFP790	NM_146185.1	NM_146185.1		233056	22122722	NM_146185.1	Zfp790	NP_666297.1	ILMN_2655804	005390731	S	3321	GCCCTCACGTTTGAGGAAGCCCATGAAGATAAATATGTTGAAATGTTTTT	7	+	30615904-30615953	7qB1	Mus musculus zinc finger protein 790 (Zfp790), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	6330581L23Rik; MGC6654	6330581L23Rik; MGC6654
Mus musculus	RefSeq	ILMN_196977	ILMN_196977	LOC332042	XM_285102.2	XM_285102.2			38050509	XM_285102.2	LOC332042		ILMN_1214350	001470088	S	454	TATCCAGTGCAGGTGTTTAAGCAGGACCAGATGGAACCTCTTTGGGTGCC										
Mus musculus	Riken	ILMN_206738	ILMN_206738	STK3	ri|D230024L13|PX00188O14|AK084333|3294					AK084333	Stk3		ILMN_1256991	004180497	S	2954	AGAGGTTTCTCGTTGTATGTTATAGAGCCTGGGCCTCAGCCTTGGCCTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210338	ILMN_210338	RNF139	NM_175226.3	NM_175226.3		75841	142377504	NM_175226.3	Rnf139	NP_780435.1	ILMN_2604560	006060066	S	2665	GCAGTGAGAGCATAAAACTGTCCTTTCAGACTTCTGATGAGATTACACAA	15	+	58732331-58732380	15qD1	Mus musculus ring finger protein 139 (Rnf139), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4930555P18Rik	4930555P18Rik
Mus musculus	RefSeq	ILMN_210338	ILMN_210338	RNF139	NM_175226.3	NM_175226.3		75841	142377504	NM_175226.3	Rnf139	NP_780435.1	ILMN_2690968	000010594	S	2628	GTGCTGTCTAAGTCTTAGTAGAAGCATCACTGTGTTTGCAGTGAGAGCAT	15	+	58732294-58732343	15qD1	Mus musculus ring finger protein 139 (Rnf139), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4930555P18Rik	4930555P18Rik
Mus musculus	Riken	ILMN_202323	ILMN_202323	4930449A18RIK	ri|4930449A18|PX00031H12|AK015427|2072					AK015427	4930449A18Rik		ILMN_2548712	002030528	S	1715	GGCTAGCAAATACAACAAGGTTCTCCCATTGTGACCAACCAGATTTTGCC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220231	ILMN_220231	CAR1	NM_009799.4	NM_009799.4		12346	145301621	NM_009799.4	Car1	NP_033929.2	ILMN_1236588	003840246	S	356	CGGCTCACTCAGTTCCATTTTCACTGGGGCAACTCAAACGACCATGGCTC				3qA1	Mus musculus carbonic anhydrase 1 (Car1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	Car-1; MGC118082; AW555628	Car-1; MGC118082; AW555628
Mus musculus	RefSeq	ILMN_227261	ILMN_227261	WFDC10	NM_001039501.1	NM_001039501.1		629756	87196518	NM_001039501.1	Wfdc10	NP_001034590.1	ILMN_2830060	006480184	S	120	CGACGGAGGGGTCCAGCGAAGGCAGAGATATGAAGCACCAGTTCACACTG	2	+	164347370-164347403:164348268-164348283	2qH3	Mus musculus WAP four-disulfide core domain 10 (Wfdc10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_187234	ILMN_242865	NEK1	XM_973975.1	XM_973975.1		18004	94385031	XM_973975.1	Nek1	XP_979069.1	ILMN_2442355	006960240	S	2155	CTCTGTATGGAGGCAGGCCCAGCTCTTCAAGAGGAGGGAAGCCAAGGAAC				8qB3.1	PREDICTED: Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 1, transcript variant 6 (Nek1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISA]		
Mus musculus	RefSeq	ILMN_220166	ILMN_220166	ACOT5	NM_145444.2	NM_145444.2		217698	46195804	NM_145444.2	Acot5	NP_663419.2	ILMN_2718421	005490402	S	1244	CCTTGGTCCATAGCTGCCCCCCACAGCTATTTTGATAAGCCTATCCTCCT	12	+	85416695-85416744	12qD1	Mus musculus acyl-CoA thioesterase 5 (Acot5), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways involving saturated monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-) and fully saturated C-C bonds [goid 32788] [evidence IDA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence IDA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [evidence IDA]; The chemical reactions and pathways involving unsaturated monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-) and one or more unsaturated C-C bonds [goid 32789] [evidence IDA]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IDA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]	BC016076; PTE-Ic	BC016076; PTE-Ic
Mus musculus	RefSeq	ILMN_185495	ILMN_185495	TRIM14	NM_029077.3	NM_029077.3		74735	146149147	NM_029077.3	Trim14	NP_083353.1	ILMN_2427498	003450743	S	1158	AAGCGTTACGACCTAGAGTACTGGGCCTTCCATGACGGCCAGCGAAGTCG				4qB1	Mus musculus tripartite motif-containing 14 (Trim14), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	pub; 5830400N10Rik	pub; 5830400N10Rik
Mus musculus	Riken	ILMN_204073	ILMN_204073	A730020O09RIK	ri|A730020O09|PX00149B10|AK042750|2421					AK042750	A730020O09Rik		ILMN_1242686	002650520	S	2040	GGGCATATTGGGCAGCTCTTCTGGAGAAAAATGGGAGTGGAGCAGGCCCT										
Mus musculus	RefSeq	ILMN_212425	ILMN_212425	PAM	NM_013626.1	NM_013626.1		18484	7305366	NM_013626.1	Pam	NP_038654.1	ILMN_2626294	006290088	S	3884	TGGTGTGTTTCCGGATGTCTTATTTTTAGATGGTTACACTGTTAGACACT	1	-	99651553-99651602	1qD	Mus musculus peptidylglycine alpha-amidating monooxygenase (Pam), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another [goid 6518] [evidence TAS]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: peptidyl-glycine + ascorbate + O2 = peptidyl(2-hydroxyglycine) + dehydroascorbate + H2O [goid 4504] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: peptidylamidoglycolate = peptidyl amide + glyoxylate [goid 4598] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PHM	PHM
Mus musculus	MEEBO	ILMN_184881	ILMN_184881	1110036D12RIK	scl5412.1.1_132						1110036D12Rik		ILMN_2422360	006450592	S	1	ACAGAATGACCCTCAAAATTAGTCCCTTTCTTCACTCTTCAGTTTTTGAA										
Mus musculus	RefSeq	ILMN_196826	ILMN_196826	LOC216768	XM_137577.1	XM_137577.1			20880729	XM_137577.1	LOC216768		ILMN_2525936	002570066	S	709	ATAGAGCCAGTCAGAGTGCCCAGCCACCACCCAGGAGCAGCCAAAGCTCA										
Mus musculus	MEEBO	ILMN_223856	ILMN_223856	ALG2	scl24346.2_118				31560365	NM_019998	Alg2		ILMN_2770492	007100538	S	2763	CAGCCCTCGTAGTGTTTGTATCGTATTCTCTGCAGTTTAGCATGCCAGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_222888	ILMN_222888	EPS8L3	NM_133867.1	NM_133867.1		99662	19527081	NM_133867.1	Eps8l3	NP_598628.1	ILMN_1224023	000650301	S	1895	AGCTGCAGATGCTGTGTCCACAGGAGGCTCCACGGATCCAGGCCCGGCTG	3	+	107685750-107685783:107686275-107686290	3qF2.3	Mus musculus ESP8-like 3 (Eps8l3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	AI504489; Eps8r3	AI504489; Eps8r3
Mus musculus	MEEBO	ILMN_216648	ILMN_216648	OLFR1104	scl4322.1.1_89	NM_146767.1			22129316	NM_146767.1	Olfr1104		ILMN_2673610	006650019	S	640	CTTTCACTTATGTGACCATCATCTCAGCCATCCTTAGGATACAGTCAGCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_223289	ILMN_223289	PCNA	NM_011045.2	NM_011045.2		18538	118130232	NM_011045.2	Pcna	NP_035175.1	ILMN_2762026	006350240	S	1063	TCTGTAAATAACCTACTTTCTTTTCTCTCCATTCTCCATAATTTGCTTAA	2	-	132075169-132075218	2qF2	Mus musculus proliferating cell nuclear antigen (Pcna), mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A protein complex composed of three identical PCNA monomers, each comprising two similar domains, which are joined in a head-to-tail arrangement to form a homotrimer. Forms a ring-like structure in solution, with a central hole sufficiently large to accommodate the double helix of DNA. Originally characterized as a DNA sliding clamp for replicative DNA polymerases and as an essential component of the replisome, and has also been shown to be involved in other processes including Okazaki fragment processing, DNA repair, translesion DNA synthesis, DNA methylation, chromatin remodeling and cell cycle regulation [goid 43626] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane [goid 5652] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA replication [goid 6275] [evidence IEA]; Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template [goid 6287] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; An accessory subunit of DNA polymerase that acts to increase the processivity of polymerization [goid 30337] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211482	ILMN_225712	LOC641178	XM_001001266.1	XM_001001266.1		641178	94393187	XM_001001266.1	LOC641178	XP_001001266.1	ILMN_1222209	001500594	S	215	GTGGTGGTGATTACATCTACTATGCAGACACTGTGAAGGGCCGATTCACC	12	-	114184007-114184056	12qF1	PREDICTED: Mus musculus similar to Ig heavy chain V region 345 precursor (LOC641178), mRNA.					
Mus musculus	Riken	ILMN_203221	ILMN_203221	CD2AP	ri|B630006O17|PX00072D18|AK046750|1623					AK046750	Cd2ap		ILMN_1254659	007150139	S	1436	CCCTCCGCCACCTCCAGCAGCCAAGTAAGCCGTTCCTAATTTAGAATTCG						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205896	ILMN_205896	A830011N18RIK	ri|A830011N18|PX00153G18|AK043603|2596					AK043603	A830011N18Rik		ILMN_1257273	004810332	S	2413	CTCCGAGGCAGCCATTCATCTGTCCAGCTATGGGGTTGTGAGTGTGTTGT										
Mus musculus	RefSeq	ILMN_190337	ILMN_241138	AFF1	NM_001080798.1	NM_001080798.1		17355	124248528	NM_001080798.1	Aff1	NP_001074267.1	ILMN_2749831	001580475	S	3883	CGACTGTCAGATCGGAATGTCAGTACTCAACAAGAGAAGCACCCGAGAGA	5	+	104279912-104279961	5qE5	Mus musculus AF4/FMR2 family, member 1 (Aff1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	Mllt2h; 9630032B01Rik; AW319193; Rob; Af4	Mllt2h; 9630032B01Rik; AW319193; Rob; Af4
Mus musculus	RefSeq	ILMN_190337	ILMN_241138	AFF1	NM_001080798.1	NM_001080798.1		17355	124248528	NM_001080798.1	Aff1	NP_001074267.1	ILMN_2469264	003780047	S	8158	GTGCCACAGATCTTTTGTTTTTCTCTGTAACAAGGACTAAGTGCTGTCTT	5	+	104284187-104284236	5qE5	Mus musculus AF4/FMR2 family, member 1 (Aff1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	Mllt2h; 9630032B01Rik; AW319193; Rob; Af4	Mllt2h; 9630032B01Rik; AW319193; Rob; Af4
Mus musculus	RefSeq	ILMN_188421	ILMN_241777	PIK3CG	NM_020272.1	NM_020272.1		30955	9937983	NM_020272.1	Pik3cg	NP_064668.1	ILMN_1227086	003450075	S	4630	GTCTACTCTAGGCTCAGGAGAGTTATAGGTACGTATTTGTGGAGCCGCTC				12qA3	Mus musculus phosphoinositide-3-kinase, catalytic, gamma polypeptide (Pik3cg), mRNA.	A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [evidence IEA]	p110gamma; 5830428L06Rik; PI3Kgamma	p110gamma; 5830428L06Rik; PI3Kgamma
Mus musculus	Riken	ILMN_202857	ILMN_202857	4932416G22RIK	ri|4932416G22|PX00017H03|AK030034|2792					AK030034	4932416G22Rik		ILMN_1226564	005270273	S	2700	GCTGAAGAGGCTGCCTGGGGGGAAAATGGTAGCAACACATCTGATGGAGG										
Mus musculus	RefSeq	ILMN_184310	ILMN_184310	V1RC11	NM_134166.1	NM_134166.1		171184	21699039	NM_134166.1	V1rc11	NP_598927.1	ILMN_1254573	003170484	S	811	GCCTATCCCACAATTACTCCTTTGGTACAAATCAGTTCTGAGAAGCGAAT	6	-	66666023-66666072	6qC1	Mus musculus vomeronasal 1 receptor, C11 (V1rc11), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_216003	ILMN_315418	LOC100044692	XM_001472863.1	XM_001472863.1		100044692	149252909	XM_001472863.1	LOC100044692	XP_001472913.1	ILMN_1247543	001170681	S	1370	GGACACCCTCTGTATCCCTTTAATGACCCATACTGAGACCTATAGTTTCT					PREDICTED: Mus musculus similar to aldehyde reductase (LOC100044692), mRNA.					
Mus musculus	MEEBO	ILMN_196137	ILMN_196137	SLC30A3	scl022784.1_270				6755551	NM_011773	Slc30a3		ILMN_2521965	007510450	S	13	GTGTGTCCATATGGGATCTGTCTGTCCATCCCTGTGTTGGTGCTGTGTCC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222290	ILMN_222290	PITPNM2	NM_011256.1	NM_011256.1		19679	6755303	NM_011256.1	Pitpnm2	NP_035386.1	ILMN_2747507	004050653	S	6476	CCTCCCATCTGTCCTTGTACTGTCTTGTTTCTCCCGACCATTGTGTAAAC	5	-	124568793-124568842	5qF	Mus musculus phosphatidylinositol transfer protein, membrane-associated 2 (Pitpnm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence ISA]	mKIAA1457; Rdgb2; NIR3; RDGBA2	mKIAA1457; Rdgb2; NIR3; RDGBA2
Mus musculus	RefSeq	ILMN_209199	ILMN_209199	BUD13	NM_146000.2	NM_146000.2		215051	118130241	NM_146000.2	Bud13	NP_666112.1	ILMN_2593532	005080041	S	2099	CTGTCTGTGGCTGGCTTGGGCAGGACACGGTGACTTCTTTATCCCAGGGT	9	+	46106757-46106806	9qA5.2	Mus musculus BUD13 homolog (yeast) (Bud13), mRNA.				MGC38070; D030060M11Rik; AV305342	MGC38070; D030060M11Rik; AV305342
Mus musculus	RefSeq	ILMN_244267	ILMN_244267	WFDC8	NM_001080550.1	NM_001080550.1		277343	123704806	NM_001080550.1	Wfdc8	NP_001074019.1	ILMN_2838051	005900181	S	1393	ATCTTTGGCTTTGTCCCTGCGATGCATGGTGTGCCTGTCCAGAGGGTCCC	2	-	164423064-164423113	2qH3	Mus musculus WAP four-disulfide core domain 8 (Wfdc8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	Gm706	Gm706
Mus musculus	RefSeq	ILMN_218458	ILMN_218458	3110070M22RIK	NM_026084.2	NM_026084.2		67304	142347265	NM_026084.2	3110070M22Rik	NP_080360.1	ILMN_2696066	002900520	S	876	GAGGCTAACTTTAGTGAGGTAGTTGGGACGATCATAGATGGACTGGCCCA	13	-	120276265-120276314	13qD2.3	Mus musculus RIKEN cDNA 3110070M22 gene (3110070M22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223730	ILMN_223730	ACVR2B	NM_007397.2	NM_007397.2		11481	118131001	NM_007397.2	Acvr2b	NP_031423.1	ILMN_1230145	002140706	S	1564	AGGTCGGTCAACGGCACTACCTCGGACTGTCTCGTCTCTCTGGTGACCTC	9	+	119342487-119342536	9qF3	Mus musculus activin receptor IIB (Acvr2b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IGI]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that initiates the activity of an inactive protein kinase [goid 32147] [evidence IDA]; The process by which the anatomical structures of the foregut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48617] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the activin family binding to a cell surface receptor [goid 32924] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IGI]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IGI]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IPI]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with activin, one of two gonadal glycoproteins related to transforming growth factor beta, to initiate a change in cell activity [goid 17002] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA];  [goid 4702] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine/tyrosine = ADP + protein serine/threonine/tyrosine phosphate [goid 4712] [evidence IDA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [evidence IPI]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [evidence IDA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [evidence IPI]; Interacting selectively with TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types [goid 50431] [evidence IDA]	MGC118477; ActRIIB	MGC118477; ActRIIB
Mus musculus	RefSeq	ILMN_221826	ILMN_221826	KRT5	NM_027011.2	NM_027011.2		110308	118130335	NM_027011.2	Krt5	NP_081287.1	ILMN_2740939	007150326	S	1586	TTGGTGTTGGCAGTGGCTTTGGCGGTGGCCTTGGCAGCGGCTTTGCTGGT	15	-	101538055-101538104	15qF2	Mus musculus keratin 5 (Krt5), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IDA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence ISO]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW146334; Krt2-5; K5; 3300001P10Rik; Tfip8	AW146334; Krt2-5; K5; 3300001P10Rik; Tfip8
Mus musculus	RefSeq	ILMN_200488	ILMN_200488	LOC381739	XM_358649.1	XM_358649.1			38082670	XM_358649.1	LOC381739		ILMN_1222598	001410241	S	589	CCAAACTCTGGGTTCATGGGCACGCATCCTTGCATCCTTGTACCTGGCCA										
Mus musculus	RefSeq	ILMN_210845	ILMN_210845	SEC61B	NM_024171.1	NM_024171.1		66212	13324683	NM_024171.1	Sec61b	NP_077133.1	ILMN_2609809	000380050	S	1	AGAGCCTGTATCTACGAGAGTTCTGAGTGCTCGGCAACTTCACGACTTCC	4	+	47495761-47495810	4qB1	Mus musculus Sec61 beta subunit (Sec61b), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any part of a ribosome [goid 43022] [evidence IDA]	AI326121; AW122942; 1190006C12Rik; MGC102034	AI326121; AW122942; 1190006C12Rik; MGC102034
Mus musculus	RefSeq	ILMN_211729	ILMN_211729	LYZL1	NM_026092.3	NM_026092.3		67328	146134942	NM_026092.3	Lyzl1	NP_080368.1	ILMN_2618942	003370139	S	596	CAGGTGCAAGGGTGCTTTCCGTGACCCGTCAGACTTGTACTGAGTATCGC				18qA1	Mus musculus lysozyme-like 1 (Lyzl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]	1700038F02Rik; Lyc2	1700038F02Rik; Lyc2
Mus musculus	RefSeq	ILMN_219187	ILMN_219187	ASAH3	NM_175731.2	NM_175731.2		171168	31341798	NM_175731.2	Asah3	NP_783858.1	ILMN_2848871	003830753	S	2170	GGGATTAAAGGCGTGTGCCACCACGCTCGGCAGACAAAGGTTTTTAACAT	17	-	56638823-56638872	17qD	Mus musculus N-acylsphingosine amidohydrolase (alkaline ceramidase) 3 (Asah3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids [goid 19216] [evidence IDA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of ceramides, any N-acetylated sphingoid [goid 46514] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine [goid 17040] [evidence IDA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]	AI662009; Cer1; 2310024P18Rik	AI662009; Cer1; 2310024P18Rik
Mus musculus	RefSeq	ILMN_197376	ILMN_197376	LOC228966	XM_141580.1	XM_141580.1			20863581	XM_141580.1	LOC228966		ILMN_2527923	006280450	S	790	TTGCACATGCCACGCGGGGAGTGCGAGGAGAGCTGGATTCACTTCATCTG										
Mus musculus	RefSeq	ILMN_214780	ILMN_214780	ZFP689	NM_175163.2	NM_175163.2		71131	31340961	NM_175163.2	Zfp689	NP_780372.1	ILMN_1220682	002100753	S	3502	GTCTGTTTTTTCATGGATAATGAGTGCCCTCTGGTTAGGGGCAGTGCCAG	7	-	134585682-134585731	7qF3	Mus musculus zinc finger protein 689 (Zfp689), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4933416E05Rik	4933416E05Rik
Mus musculus	RefSeq	ILMN_214780	ILMN_214780	ZFP689	NM_175163.2	NM_175163.2		71131	31340961	NM_175163.2	Zfp689	NP_780372.1	ILMN_2713977	004120056	S	3245	CGGGTGACTAATAGCTGGAAAAATGGCACCCACCTGACTAGGTGCTCAGT	7	-	134585939-134585988	7qF3	Mus musculus zinc finger protein 689 (Zfp689), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4933416E05Rik	4933416E05Rik
Mus musculus	Riken	ILMN_206284	ILMN_206284	SYTL3	ri|A430092N21|PX00316O16|AK079850|1622					AK079850	Sytl3		ILMN_1257198	003850082	S	1343	GCTTCTGCTTCTGTCCTGGGTCCTGGGGACTGCTGTTAAAGTGAACTCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IDA]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]		
Mus musculus	RefSeq	ILMN_197413	ILMN_197413	LOC381420	XM_358572.1	XM_358572.1			38075652	XM_358572.1	LOC381420		ILMN_2528052	004150195	S	139	GACAGCACAGGAAGAAGAGGAAGGATCAGCTCAGACTCCTCCAAGCTGGG										
Mus musculus	RefSeq	ILMN_218470	ILMN_215002	INSL3	NM_013564.5	NM_013564.5		16336	133922576	NM_013564.5	Insl3	NP_038592.3	ILMN_1249776	003850609	S	451	GCCTTGGAGGATCCCTAGTTTATTCATAGATCGCAGTAAGCAAGGACCAC	8	+	74214340-74214389	8qB3.3	Mus musculus insulin-like 3 (Insl3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Rlnl; Rlf	Rlnl; Rlf
Mus musculus	RefSeq	ILMN_215002	ILMN_215002	INSL3	NM_013564.5	NM_013564.5		16336	133922576	NM_013564.5	Insl3	NP_038592.3	ILMN_2654385	000380356	S	125	TGTGCGGCGGCCCACGCTGGTCGCCCGAGGCCACGCAGCCTGTGGAGACC	8	+	74213275-74213324	8qB3.3	Mus musculus insulin-like 3 (Insl3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Rlnl; Rlf	Rlnl; Rlf
Mus musculus	RefSeq	ILMN_203401	ILMN_243673	JPH4	NM_001003829.2	NM_001003829.2		319984	133892540	NM_001003829.2	Jph4	NP_001003829.1	ILMN_1244405	002230451	S	3370	CCACCTAATAGCAGAGGGTGTTGAAACGGGAGGAGGATTGAGGAAGCATC	14	-	55730138-55730187	14qC3	Mus musculus junctophilin 4 (Jph4), transcript variant b, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9330157P13Rik; AI425998; JPHL1; JP-4	9330157P13Rik; AI425998; JPHL1; JP-4
Mus musculus	RefSeq	ILMN_205007	ILMN_243673	JPH4	NM_001003829.2	NM_001003829.2		319984	133892540	NM_001003829.2	Jph4	NP_001003829.1	ILMN_1218712	000940475	S	2966	CAGAACTCAGTGCAACCGAAGAGTGAAGCTCAGATCTGTTCAGAACCCAG	14	-	55730542-55730591	14qC3	Mus musculus junctophilin 4 (Jph4), transcript variant b, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9330157P13Rik; AI425998; JPHL1; JP-4	9330157P13Rik; AI425998; JPHL1; JP-4
Mus musculus	MEEBO	ILMN_222351	ILMN_222351	4930563D23RIK	scl48198.1.34_205	NM_029252.1			30794179	NM_029252.1	4930563D23Rik		ILMN_2748364	001340689	S	2460	GCAGAGGTCTCTTCCTGTGAATGGTCAGCTACGGCAGCATCGATAGCAAC										
Mus musculus	RefSeq	ILMN_213399	ILMN_213399	CCT8	NM_009840.3	NM_009840.3		12469	126723460	NM_009840.3	Cct8	NP_033970.3	ILMN_1259677	004250386	S	1596	CTGGGCTATTAAACTGGCCACTAATGCTGCAGTCACTGTACTAAGAGTGG	16	-	87485053-87485102	16qC3.3	Mus musculus chaperonin containing Tcp1, subunit 8 (theta) (Cct8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI132397; Cctq	AI132397; Cctq
Mus musculus	RefSeq	ILMN_209192	ILMN_209192	INHBA	NM_008380.1	NM_008380.1		16323	6680450	NM_008380.1	Inhba	NP_032406.1	ILMN_2868220	003060458	S	1294	CCGCATGAGGGGTCACAGCCCCTTTGCCAACCTTAAGTCATGCTGTGTGC	13	+	16118809-16118858	13qA1	Mus musculus inhibin beta-A (Inhba), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of hair follicle development [goid 51799] [evidence ISA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221701	ILMN_221701	REEP4	NM_180588.1	NM_180588.1		72549	30725846	NM_180588.1	Reep4	NP_850919.1	ILMN_2739250	006250424	S	913	CTACACCAGCTACCGGGGTTCTGCTCCGTCTGGCTTGTGCCTAAATGGCA	14	+	70948357-70948406	14qD2	Mus musculus receptor accessory protein 4 (Reep4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2700029E10Rik	2700029E10Rik
Mus musculus	RefSeq	ILMN_192282	ILMN_238411	RD3	NM_023727.2	NM_023727.2		74023	142359478	NM_023727.2	Rd3	NP_076216.1	ILMN_1242556	003610600	S	1174	CCGGGATGCCCCATTCACCCTATCCATTCATGGCACCTTTACTGGTGACC	1	+	193809633-193809682	1qH6	Mus musculus retinal degeneration 3 (Rd3), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]		MGC151312; MGC117971; MGC151314	MGC151312; MGC117971; MGC151314
Mus musculus	RefSeq	ILMN_184661	ILMN_260185	TNFSF13B	NM_033622.1	NM_033622.1		24099	15826857	NM_033622.1	Tnfsf13b	NP_296371.1	ILMN_2507286	006840059	S	1383	CCAGTCCTTTGCCAACACGCACCGCAACCTTGCTTTTTGCCTTGGGTGAC	8	+	10035684-10035733	8qA1.1	Mus musculus tumor necrosis factor (ligand) superfamily, member 13b (Tnfsf13b), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that activates or increases the frequency, rate, or extent of germinal center formation [goid 2636] [evidence IMP]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence IGI]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the B cell receptor to augment B cell activation [goid 31296] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	BLyS; zTNF4; TNFSF20; TALL1; BAFF; MGC124061; TALL-1; MGC124060; THANK; D8Ertd387e	BLyS; zTNF4; TNFSF20; TALL1; BAFF; MGC124061; TALL-1; MGC124060; THANK; D8Ertd387e
Mus musculus	RefSeq	ILMN_216918	ILMN_216918	9630028B13RIK	NM_176943.2	NM_176943.2		319562	31342438	NM_176943.2	9630028B13Rik	NP_795917.1	ILMN_2857095	004220458	S	3179	GGGGCGGGGGAAATAAAAATAAAAACAGCTCCAGAGGCCCACTTGCCTCC	1	-	187130322-187130371	1qH5	Mus musculus RIKEN cDNA 9630028B13 gene (9630028B13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212908	ILMN_212908	NAGS	NM_178053.4	NM_178053.4		217214	146198799	NM_178053.4	Nags	NP_835154.1	ILMN_2682976	001030068	S	1216	CGACATCCGAGACTCCTACGAACTAGTCAATCATGCCAAGGGGCTGCCGG				11qD	Mus musculus N-acetylglutamate synthase (Nags), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]	A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6526] [evidence IEA]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamate 5-phosphate [goid 3991] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + L-glutamate = CoA + N-acetyl-L-glutamate [goid 4042] [evidence IDA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	1700120E20Rik; RP23-398F7.13; argA; AI415708	1700120E20Rik; RP23-398F7.13; argA; AI415708
Mus musculus	RefSeq	ILMN_212908	ILMN_212908	NAGS	NM_178053.4	NM_178053.4		217214	146198799	NM_178053.4	Nags	NP_835154.1	ILMN_2631534	000830600	S	1464	AGCTAAGGACTCGGCTCCAAAGTCAAACCAGACGGCCTTCAATGTCCAGC				11qD	Mus musculus N-acetylglutamate synthase (Nags), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]	A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6526] [evidence IEA]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamate 5-phosphate [goid 3991] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + L-glutamate = CoA + N-acetyl-L-glutamate [goid 4042] [evidence IDA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	1700120E20Rik; RP23-398F7.13; argA; AI415708	1700120E20Rik; RP23-398F7.13; argA; AI415708
Mus musculus	RefSeq	ILMN_198255	ILMN_232953	GM944	NM_001033445.2	NM_001033445.2		381126	134288887	NM_001033445.2	Gm944	NP_001028617.2	ILMN_1247948	001820373	S	2554	GCCCCAAAGCCAGTGGAACAGAAAGCCACCCCTGAAACATCTCCTTTGCC	18	-	21288022-21288071	18qA2	Mus musculus gene model 944, (NCBI) (Gm944), mRNA.				mKIAA4238; C86169; KIAA4238	mKIAA4238; C86169; KIAA4238
Mus musculus	Riken	ILMN_204339	ILMN_204339	2610019N13RIK	ri|A430101C24|PX00064C10|AK040467|2418					AK040467	2610019N13Rik		ILMN_2564210	005390706	S	2151	TCCCTTTGTCACCAGTCACTTGGTTTTAGCCCTTAACACTTGGTGTTGGC										
Mus musculus	RefSeq	ILMN_210654	ILMN_210654	FUT4	NM_010242.2	NM_010242.2		14345	31542828	NM_010242.2	Fut4	NP_034372.1	ILMN_2892507	005700494	S	3433	CGTGGAGGAGGGTGCCTGAAGACCTACTGTGTGACATAAGCAATGCCGCC	9	-	14499033-14499082	9qA2	Mus musculus fucosyltransferase 4 (Fut4), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IEA]	FucT-IV; FAL; AI451562; LeX	FucT-IV; FAL; AI451562; LeX
Mus musculus	RefSeq	ILMN_214094	ILMN_214094	APOF	NM_133997.2	NM_133997.2		103161	133892165	NM_133997.2	Apof	NP_598758.1	ILMN_2644185	005870360	S	1860	TTTACACTCTAATGGGGCTGGCTAACTTCCACCTGAACAAGTGATTATAG	10	+	127707137-127707186	10qD3	Mus musculus apolipoprotein F (Apof), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI255964	AI255964
Mus musculus	RefSeq	ILMN_252439	ILMN_252439	THRAP3	NM_146153.3	NM_146153.3		230753	68533245	NM_146153.3	Thrap3	NP_666265.3	ILMN_2882164	005720520	S	895	AGAGAAGCCCAGCTCTCAAAAGCCCCCTCCAGTCTGTGGTGGTTAGGCGC	4	-	125857409-125857458	4qD2.2	Mus musculus thyroid hormone receptor associated protein 3 (Thrap3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]	MGC98683; MGC37192; MGC56927; Trap150; MGC116673; 9330151F09Rik; B230333E16Rik	MGC98683; MGC37192; MGC56927; Trap150; MGC116673; 9330151F09Rik; B230333E16Rik
Mus musculus	RefSeq	ILMN_199689	ILMN_236889	EG383815	XM_906413.2	XM_906413.2		383815	94369167	XM_906413.2	EG383815	XP_911506.1	ILMN_1220597	004050725	S	75	GGATGTCCTCCATCCTTGGAAGGCAAAAGTCCCAAAGACAGAAATTTGGG				3qA1	PREDICTED: Mus musculus predicted gene, EG383815 (EG383815), mRNA.					
Mus musculus	RefSeq	ILMN_195464	ILMN_231900	MBD6	NM_033072.2	NM_033072.2		110962	70778937	NM_033072.2	Mbd6	NP_149063.2	ILMN_2649771	001240253	S	3656	GCTCAAAGCACAGATCCCCTCTTATCCCTGTCCCCAGGACCGAAACACAT	10	-	126719352-126719401	10qD3	Mus musculus methyl-CpG binding domain protein 6 (Mbd6), mRNA.				D10Wsu93e	D10Wsu93e
Mus musculus	RefSeq	ILMN_199110	ILMN_231900	MBD6	NM_033072.2	NM_033072.2		110962	70778937	NM_033072.2	Mbd6	NP_149063.2	ILMN_1224806	006100170	S	487	GGCAACTCTGTACCGCAGCATGGAGACCACCTGCTCACACTCTTCTCCTG	10	-	126723628-126723628:126723850-126723898	10qD3	Mus musculus methyl-CpG binding domain protein 6 (Mbd6), mRNA.				D10Wsu93e	D10Wsu93e
Mus musculus	RefSeq	ILMN_200114	ILMN_200114	LOC384216	XM_357495.1	XM_357495.1			38080449	XM_357495.1	LOC384216		ILMN_1259567	007550754	S	102	TCCTGTGGAGCCTGCTGTAGGAGTCAAAGCACACCCTCCCAAACTGAAGA										
Mus musculus	RefSeq	ILMN_192757	ILMN_248894	AIG1	NM_025446.1	NM_025446.1		66253	13384847	NM_025446.1	Aig1	NP_079722.1	ILMN_1227386	002570102	S	902	GAGAGATTTGGGCATCGCCACGGACATAGTCCATCATTCTGGCTATCACC	10	-	13343009-13343058	10qA2	Mus musculus androgen-induced 1 (Aig1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1500031O19Rik; CGI-103; AV064870; AW413422	1500031O19Rik; CGI-103; AV064870; AW413422
Mus musculus	RefSeq	ILMN_202206	ILMN_322439	LOC100048112	XM_001479363.1	XM_001479363.1		100048112	149257453	XM_001479363.1	LOC100048112	XP_001479413.1	ILMN_2547814	001300050	S	65	CGCGTTCACGTAGGGAAACTGAGTTCTGGCTCAGGGAAATCGCCGGCCGA					PREDICTED: Mus musculus hypothetical protein LOC100048112 (LOC100048112), mRNA.					
Mus musculus	Riken	ILMN_203096	ILMN_203096	6430402H23RIK	ri|6430402H23|PX00009F08|AK078177|1630					AK078177	6430402H23Rik		ILMN_1220550	000610372	S	1539	CTTTTTGTAGCACACTGCAAAGAACATCTGAGCCAAGGATGTCCCACACC										
Mus musculus	RefSeq	ILMN_200190	ILMN_200190	LOC385896	XM_358991.1	XM_358991.1			38080862	XM_358991.1	LOC385896		ILMN_2537890	006400315	S	941	GTGCTTGTTCAGTGGAAGCAGGAGTGAGTGGCTGTCACAGAGACATGAGG										
Mus musculus	Riken	ILMN_202272	ILMN_202272	HBB-B1	ri|2510028J08|ZX00060I20|AK011016|628					AK011016	Hbb-b1		ILMN_1229203	002340672	S	68	CGATGCTGAGAAGGCTGCTGTCTCTGGCCTGTGGGGAAAGGTGAACGCCG						An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IMP]		
Mus musculus	Riken	ILMN_202305	ILMN_202305	STK39	ri|5430411A13|PX00022F03|AK017292|2039					AK017292	Stk39		ILMN_1252707	002070678	S	1955	CTCAGACCCATGCAATAGGGTACTCAATCCCTTTACCTTGAAACCCTGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199351	ILMN_199351	LOC385611	XM_358783.1	XM_358783.1			38080545	XM_358783.1	LOC385611		ILMN_1228290	001190255	S	113	CTACGCACACCACAGAGCCCCTGGGAACAGGCACTGTGTCAGCAGAGCTG										
Mus musculus	RefSeq	ILMN_225230	ILMN_225230	FCRL5	NM_183222.2	NM_183222.2		329693	51510888	NM_183222.2	Fcrl5	NP_899045.2	ILMN_3162075	003450673	S	2035	CTAAGACTGGGCCAACATCCCCATCTTCTCTTTGGTTTCCCAGAGCCACG	3	+	87271040-87271089	3qF1	Mus musculus Fc receptor-like 5 (Fcrl5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Fcrh3; mBXMH2	Fcrh3; mBXMH2
Mus musculus	RefSeq	ILMN_202415	ILMN_260796	ZC3H14	NM_029334.1	NM_029334.1		75553	62526121	NM_029334.1	Zc3h14	NP_083610.1	ILMN_1245261	004180044	S	2313	GTGCCACCAAGACACGCCTTGAAATGGATTCGACCTCAGAGCAGTGAGTG	12	+	100023908-100023951:100024785-100024790	12qE	Mus musculus zinc finger CCCH type containing 14 (Zc3h14), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2700069A02Rik; 1010001P15Rik; 1700016A15Rik; AU014748	2700069A02Rik; 1010001P15Rik; 1700016A15Rik; AU014748
Mus musculus	RefSeq	ILMN_214935	ILMN_260796	ZC3H14	NM_029334.1	NM_029334.1		75553	62526121	NM_029334.1	Zc3h14	NP_083610.1	ILMN_2653642	004730048	S	265	TGGTGGCCAACAAGAAAAGTCAGGACCAAATGACAGAGGACCTGTCCCTG	12	+	99991018-99991067	12qE	Mus musculus zinc finger CCCH type containing 14 (Zc3h14), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2700069A02Rik; 1010001P15Rik; 1700016A15Rik; AU014748	2700069A02Rik; 1010001P15Rik; 1700016A15Rik; AU014748
Mus musculus	RefSeq	ILMN_260796	ILMN_260796	ZC3H14	NM_029334.1	NM_029334.1		75553	62526121	NM_029334.1	Zc3h14	NP_083610.1	ILMN_3085317	003930575	A	1944	CTTCTGGAGCGCTGCAAGTACTGGCCTGCCTGTAAAAATGGGGATGAGTG	12	+	100021833-100021882	12qE	Mus musculus zinc finger CCCH type containing 14 (Zc3h14), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2700069A02Rik; 1010001P15Rik; 1700016A15Rik; AU014748	2700069A02Rik; 1010001P15Rik; 1700016A15Rik; AU014748
Mus musculus	RefSeq	ILMN_260796	ILMN_260796	ZC3H14	NM_029334.1	NM_029334.1		75553	62526121	NM_029334.1	Zc3h14	NP_083610.1	ILMN_3014257	006220487	I	1807	CAGCCTCAAACAAGGGACTCAGAGGTCTCCTCCACCCACAGCAGTTGCAT	12	+	100018395-100018444	12qE	Mus musculus zinc finger CCCH type containing 14 (Zc3h14), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2700069A02Rik; 1010001P15Rik; 1700016A15Rik; AU014748	2700069A02Rik; 1010001P15Rik; 1700016A15Rik; AU014748
Mus musculus	RefSeq	ILMN_186153	ILMN_186153	ZFP354B	NM_013744.2	NM_013744.2		27274	24475952	NM_013744.2	Zfp354b	NP_038772.1	ILMN_2433057	002750563	S	2044	CTGTAGCAGACATTGACAATGGCCATTTATAAGATAACAGAAACACCTTT	11	-	50735557-50735606	11qB1.3	Mus musculus zinc finger protein 354B (Zfp354b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC130408; Kid2; MGC130409; Tcf17l1	MGC130408; Kid2; MGC130409; Tcf17l1
Mus musculus	MEEBO	ILMN_195592	ILMN_195592	PROK1	scl0246691.1_321				51708372	XM_487748	Prok1		ILMN_1233213	002000379	S	13	GTCAGCTCAGACCAGCCAAAGGGCCAACATCGAGGCTTTGTGTGCAGTTT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IDA]			
Mus musculus	RefSeq	ILMN_198653	ILMN_198653	LOC330532	XM_286022.2	XM_286022.2			38086684	XM_286022.2	LOC330532		ILMN_1227364	003190215	S	2234	ATCGATGCCGTCGCCGAGAAAACACATCAGCTGTCATCTGTGCCAACCCC										
Mus musculus	RefSeq	ILMN_213150	ILMN_213150	4930542N07RIK	NM_029199.2	NM_029199.2		75185	141802341	NM_029199.2	4930542N07Rik	NP_083475.1	ILMN_1250881	004060259	S	876	CTGTCAGATGGCTCTTAGAAGAAATTTACAATTGACATACAAAACTTATG	X	+	150919138-150919187	XqF3	Mus musculus RIKEN cDNA 4930542N07 gene (4930542N07Rik), mRNA.				RP23-228N14.4	RP23-228N14.4
Mus musculus	RefSeq	ILMN_221872	ILMN_221872	ATP6V0B	NM_033617.3	NM_033617.3		114143	146149181	NM_033617.3	Atp6v0b	NP_291095.1	ILMN_1243149	000870386	S	932	CCCCCCTCAACCCCCATCCAGCCCATCTTCCTAGTGTTTGTGAAATAAAC				4qD2.1	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit B (Atp6v0b), mRNA.	A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol [goid 5773] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence ISA]	2310024H13Rik; VMA16; Atp6f	2310024H13Rik; VMA16; Atp6f
Mus musculus	RefSeq	ILMN_232318	ILMN_232318	DEFB8	NM_153108.3	NM_153108.3		244334	32129299	NM_153108.3	Defb8	NP_694748.2	ILMN_2814551	001400440	S	105	GCATTCGAAACGGAGGCATATGCCAGTATCGGTGCATTGGCCTTAGGCAT	8	-	19445901-19445950	8qA1.3	Mus musculus defensin beta 8 (Defb8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]		Defr1; mBD8	Defr1; mBD8
Mus musculus	RefSeq	ILMN_198267	ILMN_239380	5430411K18RIK	XM_916282.3	XM_916282.3		71423	149270158	XM_916282.3	5430411K18Rik	XP_921375.3	ILMN_1251205	000270338	S	1397	TGCAGAAGCTGGTGTCCGTGTTACAACGAGTCGGCTGTCCTGGGGATCAC				18qE3	PREDICTED: Mus musculus RIKEN cDNA 5430411K18 gene (5430411K18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220446	ILMN_239380	5430411K18RIK	XM_916282.3	XM_916282.3		71423	149270158	XM_916282.3	5430411K18Rik	XP_921375.3	ILMN_2722131	000110754	S	9408	GGTCTGTCATCCCCTCTCCAATAGAAGAAAACTTTAGAAGCTGTAGACAG				18qE3	PREDICTED: Mus musculus RIKEN cDNA 5430411K18 gene (5430411K18Rik), mRNA.					
Mus musculus	MEEBO	ILMN_195703	ILMN_195703	9845300_5604	9845300_5604						9845300_5604		ILMN_1237217	005720475	S	15	AGCGAGCTGTACCGGAGTCGCGCCATGCCCTGCATCGTCTGCGTGGGGTC										
Mus musculus	RefSeq	ILMN_212708	ILMN_251725	RCBTB1	NM_027764.1	NM_027764.1		71330	58037240	NM_027764.1	Rcbtb1	NP_082040.1	ILMN_1240769	006100167	S	2463	GGGGGTCTCTTAAGAAATAGTCTTAATATGCATTAAACCCACTTAAGCAG	14	+	59854608-59854657	14qC3	Mus musculus regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 (Rcbtb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CLLD7; 5430409I18Rik; AW111883; CLLL7	CLLD7; 5430409I18Rik; AW111883; CLLL7
Mus musculus	RefSeq	ILMN_216864	ILMN_216864	PRSS28	NM_053259.2	NM_053259.2		114661	115299757	NM_053259.2	Prss28	NP_444489.2	ILMN_2676226	005860102	S	916	GCAACAATCTGCCATCAATCTTCTCAAGAGTCCAGAGCTCCTTAGCCTGG	17	+	25448547-25448596	17qA3.3	Mus musculus protease, serine, 28 (Prss28), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Isp1; mIsp-1	Isp1; mIsp-1
Mus musculus	RefSeq	ILMN_216003	ILMN_216003	AKR1A4	NM_021473.2	NM_021473.2		58810	31981167	NM_021473.2	Akr1a4	NP_067448.1	ILMN_3147135	000610753	A	979	GCGCCATCCTGATGAGCCAGTCCTGCTTGAAGAACCAGTAGTCTTGGCAC	4	-	116311608-116311657	4qD1	Mus musculus aldo-keto reductase family 1, member A4 (aldehyde reductase) (Akr1a4), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions [goid 19853] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of aldehydes, any organic compound with the formula R-CH=O [goid 46185] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of D-glucuronate, the dextrorotatory isomer of glucuronate [goid 42840] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+ [goid 4032] [evidence TAS]; Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+ [goid 4032] [evidence ISS]; Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+ [goid 4032] [evidence IDA]; Catalysis of the reaction: L-gulonate + NADP+ = D-glucuronate + NADPH [goid 47939] [evidence IDA]; Catalysis of the reaction: an alcohol + NADP+ = an aldehyde + NADPH + H+ [goid 8106] [evidence NAS]	2610201A18Rik; Akr1a1	2610201A18Rik; Akr1a1
Mus musculus	RefSeq	ILMN_216003	ILMN_216003	AKR1A4	NM_021473.2	NM_021473.2		58810	31981167	NM_021473.2	Akr1a4	NP_067448.1	ILMN_3068754	000940474	I	1076	CAGGTTCAGCGGAAAGTGATCTGCATCCCCAAAAGCATCAATCCTTCCCG	4	-	116310599-116310648	4qD1	Mus musculus aldo-keto reductase family 1, member A4 (aldehyde reductase) (Akr1a4), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions [goid 19853] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of aldehydes, any organic compound with the formula R-CH=O [goid 46185] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of D-glucuronate, the dextrorotatory isomer of glucuronate [goid 42840] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+ [goid 4032] [evidence TAS]; Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+ [goid 4032] [evidence ISS]; Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+ [goid 4032] [evidence IDA]; Catalysis of the reaction: L-gulonate + NADP+ = D-glucuronate + NADPH [goid 47939] [evidence IDA]; Catalysis of the reaction: an alcohol + NADP+ = an aldehyde + NADPH + H+ [goid 8106] [evidence NAS]	2610201A18Rik; Akr1a1	2610201A18Rik; Akr1a1
Mus musculus	RefSeq	ILMN_197396	ILMN_197396	LOC380887	XM_358451.1	XM_358451.1			38075566	XM_358451.1	LOC380887		ILMN_2527991	000730682	S	595	GTTTACTCAGGGAAAGAAGGGCAATCCCAGATTGCTGGGTGAAAAGAGCC										
Mus musculus	MEEBO	ILMN_216091	ILMN_216091	D11MOH35	scl00268470.2_235	NM_172300.2			31542454	NM_172300.2	D11Moh35		ILMN_1225931	005700152	S	727	TCTCCATCCAGTCCCTGATGACTGAGAATCCCTACCACAACGAACCAGGC										
Mus musculus	MEEBO	ILMN_216091	ILMN_216091	D11MOH35	scl00268470.2_235	NM_172300.2			31542454	NM_172300.2	D11Moh35		ILMN_1233328	002810397	S	3812	GCCACAAGAAGCTACATCTTGGCCCAGCCATGAGTCTAGATGTTTTACAC										
Mus musculus	MEEBO	ILMN_224293	ILMN_224293	2210021J22RIK	scl46876.5.1_23				39930552	NM_197998	2210021J22Rik		ILMN_2778076	001300008	S	485	AGAAGAGAAAGAGCACCAGCAAGAAGCACTCCAACCGTCCCTGACTGGCA										
Mus musculus	MEEBO	ILMN_223823	ILMN_223823	TIMP1	scl55015.6.1_13				6755794	NM_011593	Timp1		ILMN_2769918	004640215	S	549	CTACCAGAGCCGTCACTTTGCTTGCCTGCCACGGAATCCAGGCTTGTGCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IEA]	Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218061	ILMN_218061	CYP2C37	NM_010001.1	NM_010001.1		13096	6753579	NM_010001.1	Cyp2c37	NP_034131.1	ILMN_2691060	001240592	S	1506	CTGTGATCACCCTGAGGCTTTAATTCACTGCTTTCCACACTGGACACACT	19	+	40086431-40086480	19qC3	Mus musculus cytochrome P450, family 2. subfamily c, polypeptide 37 (Cyp2c37), mRNA. XM_975342	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218061	ILMN_218061	CYP2C37	NM_010001.1	NM_010001.1		13096	6753579	NM_010001.1	Cyp2c37	NP_034131.1	ILMN_2691059	004480437	S	1505	TCTGTGATCACCCTGAGGCTTTAATTCACTGCTTTCCACACTGGACACAC	19	+	40086430-40086479	19qC3	Mus musculus cytochrome P450, family 2. subfamily c, polypeptide 37 (Cyp2c37), mRNA. XM_975342	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218061	ILMN_218061	CYP2C37	NM_010001.1	NM_010001.1		13096	6753579	NM_010001.1	Cyp2c37	NP_034131.1	ILMN_2894828	006590524	S	1532	CACTGCTTTCCACACTGGACACACTGACTTTTATCCAGTTCTTTTGCCTC	19	+	40086457-40086506	19qC3	Mus musculus cytochrome P450, family 2. subfamily c, polypeptide 37 (Cyp2c37), mRNA. XM_975342	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_229466	ILMN_229466	PAWR	NM_054056.2	NM_054056.2		114774	119392099	NM_054056.2	Pawr	NP_473397.1	ILMN_3160581	004540433	S	785	TCCCAGATCCAGGCACATCCTACCTGCCCCAGGACCCGTCGAGAACAGTT	10	+	107819886-107819917:107828754-107828771	10qD1	Mus musculus PRKC, apoptosis, WT1, regulator (Pawr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; The chemical reactions and pathways resulting in the formation of interleukin-2 [goid 42094] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of beta-amyloid [goid 42986] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PAR4; Par-4	PAR4; Par-4
Mus musculus	RefSeq	ILMN_221866	ILMN_229466	PAWR	NM_054056.2	NM_054056.2		114774	119392099	NM_054056.2	Pawr	NP_473397.1	ILMN_1253838	001260689	S	1569	GGGGAGTTGGCCTACAATGCCTTATTACTAATGCGTGCGGCCTTCTGTGT	10	+	107851188-107851237	10qD1	Mus musculus PRKC, apoptosis, WT1, regulator (Pawr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; The chemical reactions and pathways resulting in the formation of interleukin-2 [goid 42094] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of beta-amyloid [goid 42986] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PAR4; Par-4	PAR4; Par-4
Mus musculus	Riken	ILMN_203421	ILMN_203421	UTX	ri|B230209C05|PX00069K23|AK045533|1536					AK045533	Utx		ILMN_1235933	003120010	S	840	GTGAGTACATTAGATCAGTTGGGAGGCAGTAGTGTTTGCTCTGCTACCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201562	ILMN_201562	OLFR767	NM_146422.1	NM_146422.1		258760	22129320	NM_146422.1	Olfr767	NP_666534.1	ILMN_2817249	000780682	S	512	GGCTAAATCATTATTTCTGTGACTTTGAGCCTCTTCTAGAACTCTCCTGT					Mus musculus olfactory receptor 767 (Olfr767), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR115-1	MOR115-1
Mus musculus	Riken	ILMN_204782	ILMN_204782	C130042F01RIK	ri|C130042F01|PX00168P10|AK048239|3755					AK048239	C130042F01Rik		ILMN_1233583	007510747	S	3242	GGCTATGCGGATACCACAAGGCTCTTCTGTCTCGTGTGTTTTTGTTAGGG										
Mus musculus	RefSeq	ILMN_208952	ILMN_208952	ELAVL4	NM_010488.3	NM_010488.3		15572	112181304	NM_010488.3	Elavl4	NP_034618.2	ILMN_2734000	005860750	S	1613	GGACTTTATAAGCCCGCGTTGCCTAAGTATTAAAACATTGGATTATCCTG	4	-	109878773-109878822	4qC7	Mus musculus ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) (Elavl4), transcript variant 1, mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hud; PNEM; Elav	Hud; PNEM; Elav
Mus musculus	RefSeq	ILMN_208952	ILMN_208952	ELAVL4	NM_010488.3	NM_010488.3		15572	112181304	NM_010488.3	Elavl4	NP_034618.2	ILMN_3102035	002320619	A	3638	GTAGTGGTAGACAGATAACGAAAACCGAGGCTGCATCATAGACTACTCCT	4	-	109876748-109876797	4qC7	Mus musculus ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) (Elavl4), transcript variant 1, mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hud; PNEM; Elav	Hud; PNEM; Elav
Mus musculus	RefSeq	ILMN_208952	ILMN_208952	ELAVL4	NM_010488.3	NM_010488.3		15572	112181304	NM_010488.3	Elavl4	NP_034618.2	ILMN_3028854	004610593	I	205	TGTGTAGCGGTGCCTGGCGTGTTGAGTTGTTGCTTCCTTCTCTGGGCAGC	4	-	109959185-109959234	4qC7	Mus musculus ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) (Elavl4), transcript variant 1, mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hud; PNEM; Elav	Hud; PNEM; Elav
Mus musculus	RefSeq	ILMN_213073	ILMN_213073	PIN1	NM_023371.3	NM_023371.3		23988	145301623	NM_023371.3	Pin1	NP_075860.1	ILMN_2633248	005390100	S	3303	CGGAGATGATTTAATCACAGAGGCCATTAATTAGAGATGGGACAGCAGCC				9qA3	Mus musculus protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 (Pin1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	0610025L01Rik; D9Bwg1161e	0610025L01Rik; D9Bwg1161e
Mus musculus	MEEBO	ILMN_190989	ILMN_190989	IGHV1S127_AF304546_IG_HEAVY_VARIABLE_1S127_146	IGHV1S127_AF304546_Ig_heavy_variable_1S127_146						IGHV1S127_AF304546_Ig_heavy_variable_1S127_146		ILMN_1238530	004760600	S	11	CCTTCAGATAGTTATACTAGCTACAATCAAAAGTTCAAGGGCAAGGCCAC										
Mus musculus	MEEBO	ILMN_187738	ILMN_187738	B430007K19RIK	scl35979.1_65						B430007K19Rik		ILMN_2446700	003840576	S	3	TGTGCTGCTCCTGAAACTAAAGGCGTAGTGTGCTAGGCAAACCTTTAGAT										
Mus musculus	RefSeq	ILMN_211350	ILMN_211350	2510003E04RIK	NM_028197.2	NM_028197.2		72320	72384370	NM_028197.2	2510003E04Rik	NP_082473.2	ILMN_1255236	003800091	S	2230	CAGTACTTGTTAGATTTCATACTAGGAACAACACTGGGTAGTGTACCTGG	10	-	62021410-62021459	10qB4	Mus musculus RIKEN cDNA 2510003E04 gene (2510003E04Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		MGC107132; 0710007C18Rik; mKIAA1279	MGC107132; 0710007C18Rik; mKIAA1279
Mus musculus	RefSeq	ILMN_242933	ILMN_242933	UNC13C	NM_001081153.1	NM_001081153.1		208898	124487216	NM_001081153.1	Unc13c	NP_001074622.1	ILMN_3142865	000540463	A	5772	GAAGCAGATTGTTCTCCCTCCACTGACAGACCAAACGGGGCCTCAGATGA	9	-	73378764-73378777:73381715-73381750	9qD	Mus musculus unc-13 homolog C (C. elegans) (Unc13c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Phorbol ester/diacylglycerol binding proteins that do not have intrinsic kinase activity [goid 1566] [evidence TAS]	Unc13h3; MGC40770; AU019458; D9Ertd414e; Munc13-3	Unc13h3; MGC40770; AU019458; D9Ertd414e; Munc13-3
Mus musculus	RefSeq	ILMN_198937	ILMN_242933	UNC13C	NM_001081153.1	NM_001081153.1		208898	124487216	NM_001081153.1	Unc13c	NP_001074622.1	ILMN_1221160	005820538	S	7060	GTAGACACCCTGCAGATCCAGTTTTCTACCACACCTAGAAATGCAGCGAC	9	-	73328200-73328249	9qD	Mus musculus unc-13 homolog C (C. elegans) (Unc13c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Phorbol ester/diacylglycerol binding proteins that do not have intrinsic kinase activity [goid 1566] [evidence TAS]	Unc13h3; MGC40770; AU019458; D9Ertd414e; Munc13-3	Unc13h3; MGC40770; AU019458; D9Ertd414e; Munc13-3
Mus musculus	RefSeq	ILMN_187737	ILMN_242933	UNC13C	NM_001081153.1	NM_001081153.1		208898	124487216	NM_001081153.1	Unc13c	NP_001074622.1	ILMN_2446691	004290768	S	4190	CGTCTCAGGAAATAGTGGATGAATTTGCCATGCGTTATGGGGTTGAGTCC	9	-	73541028-73541077	9qD	Mus musculus unc-13 homolog C (C. elegans) (Unc13c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Phorbol ester/diacylglycerol binding proteins that do not have intrinsic kinase activity [goid 1566] [evidence TAS]	Unc13h3; MGC40770; AU019458; D9Ertd414e; Munc13-3	Unc13h3; MGC40770; AU019458; D9Ertd414e; Munc13-3
Mus musculus	RefSeq	ILMN_188938	ILMN_261671	DLST	NM_030225.3	NM_030225.3		78920	30841024	NM_030225.3	Dlst	NP_084501.1	ILMN_1237507	002480482	S	2449	AATGCTTAAGTGGTTTTGAGCGCTCCTAGGCCTCGTATCCTGCACTGAGC	12	+	86474786-86474835	12qD2	Mus musculus dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) (Dlst), mRNA.	A complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) ; EC:1.2.4.2 (E1), dihydrolipoamide S-succinyltransferase ; EC:2.3.1.61 (E2) and dihydrolipoamide dehydrogenase ; EC:1.8.1.4 (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2) [goid 45252] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with lipoic acid, 1,2-dithiolane-3-pentanoic acid [goid 31405] [evidence IEA]; Catalysis of the reaction: succinyl-CoA + dihydrolipoamide = CoA + S-succinyldihydrolipoamide [goid 4149] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	4930529O08Rik; DLTS; 1600017E01Rik; 4632413C10Rik	4930529O08Rik; DLTS; 1600017E01Rik; 4632413C10Rik
Mus musculus	RefSeq	ILMN_223133	ILMN_223133	SYAP1	NM_025932.1	NM_025932.1		67043	13385423	NM_025932.1	Syap1	NP_080208.1	ILMN_2941840	004180369	S	1829	GCTCCAGGTTCCATTTCCACTATCTCAGCTAAAAGTGCAAGCCAGATTTG	X	-	159295181-159295230	XqF4	Mus musculus synapse associated protein 1 (Syap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			2010110O17Rik; AW011796	2010110O17Rik; AW011796
Mus musculus	RefSeq	ILMN_223133	ILMN_223133	SYAP1	NM_025932.1	NM_025932.1		67043	13385423	NM_025932.1	Syap1	NP_080208.1	ILMN_2759749	006860400	S	1769	GCTGAAACACTTTCTGTGCAGGACTAGGGAGGGATGTGGTGAACACTTGT	X	-	159295241-159295290	XqF4	Mus musculus synapse associated protein 1 (Syap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			2010110O17Rik; AW011796	2010110O17Rik; AW011796
Mus musculus	RefSeq	ILMN_201303	ILMN_315894	LOC100041769	XM_001476977.1	XM_001476977.1		100041769	149261009	XM_001476977.1	LOC100041769	XP_001477027.1	ILMN_1227466	002680161	S	288	TCTTTTGGAGGCTGGCATCACCAAGGCGGTTCACGGATTCCACGATGAAC	10	+	90691218-90691267	10qC2	PREDICTED: Mus musculus similar to protein translation factor sui1 homolog (LOC100041769), mRNA.					
Mus musculus	RefSeq	ILMN_196450	ILMN_257943	9030619P08RIK	NM_001039720.1	NM_001039720.1		105892	89886450	NM_001039720.1	9030619P08Rik	NP_001034809.1	ILMN_1214448	007100228	S	688	TTGACTTGCTACTTTTGGCCCTGGAGGCAAGGGGCCAGCACAGGGAATAG	15	-	75258155-75258204	15qD3	Mus musculus RIKEN cDNA 9030619P08 gene (9030619P08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_257943	ILMN_257943	9030619P08RIK	NM_001039720.1	NM_001039720.1		105892	89886450	NM_001039720.1	9030619P08Rik	NP_001034809.1	ILMN_3017818	006560162	I	7	GAAACCCCTCCCTTTTCAGGATGTCAGCTGGGAGGAGCTGAGAGAAAGTA	15	-	75262203-75262252	15qD3	Mus musculus RIKEN cDNA 9030619P08 gene (9030619P08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209616	ILMN_209616	CHRNA1	NM_007389.2	NM_007389.2		11435	31542390	NM_007389.2	Chrna1	NP_031415.2	ILMN_2733656	005870646	S	1504	TGTTCTACATGTCCTACATGTTAATGAGAGTGATCTCTGCTCACACGGCT	2	-	73366854-73366903	2qC3	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle) (Chrna1), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence ISO]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IPI]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence ISO]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence ISO]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IGI]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [evidence IGI]	Acra; AI608266; AI385656; Achr-1	Acra; AI608266; AI385656; Achr-1
Mus musculus	RefSeq	ILMN_212342	ILMN_212342	HACL1	NM_019975.2	NM_019975.2		56794	31560354	NM_019975.2	Hacl1	NP_064359.2	ILMN_2625333	000580689	S	1911	TAAAATTGTATTTAAAAATACACTTTAAATTGTATTTTATAGTAAAGAAA	14	-	32421065-32421114	14qB	Mus musculus 2-hydroxyacyl-CoA lyase 1 (Hacl1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]	Phyh2; 1600020H07Rik; Hpcl	Phyh2; 1600020H07Rik; Hpcl
Mus musculus	RefSeq	ILMN_212342	ILMN_212342	HACL1	NM_019975.2	NM_019975.2		56794	31560354	NM_019975.2	Hacl1	NP_064359.2	ILMN_2739364	007210615	S	417	GGTGGTTCTTCTGAAAGAAATCAAGAAGCTATGGGAGCCTTCCAGGAGTT	14	-	32446088-32446137	14qB	Mus musculus 2-hydroxyacyl-CoA lyase 1 (Hacl1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]	Phyh2; 1600020H07Rik; Hpcl	Phyh2; 1600020H07Rik; Hpcl
Mus musculus	RefSeq	ILMN_220943	ILMN_240370	4931407G18RIK	NM_027631.2	NM_027631.2		70977	142388868	NM_027631.2	4931407G18Rik	NP_081907.1	ILMN_1221187	002600521	S	1419	CTGATACAGACTTTGCAAGTGGGTCTGTTGTCGCTGGGCTGATTCTCCTC	5	+	88410495-88410544	5qE1	Mus musculus RIKEN cDNA 4931407G18 gene (4931407G18Rik), mRNA.				AI428159	AI428159
Mus musculus	RefSeq	ILMN_212925	ILMN_228381	OLFR558	NM_147093.3	NM_147093.3		259097	142369590	NM_147093.3	Olfr558	NP_667304.1	ILMN_2631693	004810136	S	520	CCTCTACGGCATGCCACTGTGCTGACATTGCCTCGTGTTGCCAAGATTGG	7	+	109858165-109858214	7qE3	Mus musculus olfactory receptor 558 (Olfr558), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	POGR; MOR18-1	POGR; MOR18-1
Mus musculus	RefSeq	ILMN_197637	ILMN_197637	LOC239370	XM_139384.3	XM_139384.3			38077030	XM_139384.3	LOC239370		ILMN_1212678	001450278	S	3667	GCTGTTGTTACCCTTTGGTTGGAGGTGAGGCATGGAGACAGAGCGGAGCC										
Mus musculus	RefSeq	ILMN_233050	ILMN_233050	WFDC6B	NM_001012725.1	NM_001012725.1		433502	71480129	NM_001012725.1	Wfdc6b	NP_001012743.1	ILMN_3062983	004540356	I	687	TCATGACCTTCGACCTTTGACCCCCTCCTCAGCCTGGGACTCTCATCACC	2	+	164443593-164443642	2qH3	Mus musculus WAP four-disulfide core domain 6B (Wfdc6b), mRNA.				Wfdc6; WAP6b	Wfdc6; WAP6b
Mus musculus	RefSeq	ILMN_233050	ILMN_233050	WFDC6B	NM_001012725.1	NM_001012725.1		433502	71480129	NM_001012725.1	Wfdc6b	NP_001012743.1	ILMN_3140659	006940400	A	228	TGTTTACGACACAGAGAGTGTCCAGGGGAGGAAAGGTGCTGCCTGTTCGC	2	+	164440444-164440493	2qH3	Mus musculus WAP four-disulfide core domain 6B (Wfdc6b), mRNA.				Wfdc6; WAP6b	Wfdc6; WAP6b
Mus musculus	RefSeq	ILMN_217706	ILMN_217706	PSMD13	NM_011875.4	NM_011875.4		23997	146134473	NM_011875.4	Psmd13	NP_036005.1	ILMN_2686644	004230215	S	1494	CCAGCTCCACCTGAGTGGACTTTGTCCAGTGTGGTCTGAGTGCTGCTCTA				7qF5	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 (Psmd13), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex [goid 5838] [evidence IDA]	Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells [goid 7127] [evidence IMP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence ISA]	S11	S11
Mus musculus	RefSeq	ILMN_214946	ILMN_214946	DIRC2	NM_153550.3	NM_153550.3		224132	118130106	NM_153550.3	Dirc2	NP_705778.1	ILMN_1224927	006250139	S	4306	GCCCTCCACCAATCCAAGCTCTGTATGGAGAATGTATAGAGATGGCCCCA	16	-	35695187-35695236	16qB3	Mus musculus disrupted in renal carcinoma 2 (human) (Dirc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC47126; RCC4	MGC47126; RCC4
Mus musculus	Riken	ILMN_206063	ILMN_206063	D330001F19RIK	ri|D330001F19|PX00190O16|AK052154|3002					AK052154	D330001F19Rik		ILMN_1259917	004810612	S	2705	GCTAGGTGTGAAGACACAGCCTGACCTCAGCATGATTGTGGTGGGTGAAG										
Mus musculus	RefSeq	ILMN_209243	ILMN_231068	ZFP719	XM_924581.2	XM_924581.2		210105	94380261	XM_924581.2	Zfp719	XP_929674.1	ILMN_1252381	002000392	S	3027	AGGAGATATTTTATGGACTGTGTTTCTTTGCATGTTGAAGAAATGTTGAC				7qB4	PREDICTED: Mus musculus zinc finger protein 719, transcript variant 6 (Zfp719), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220479	ILMN_220479	KRT14	NM_016958.1	NM_016958.1		16664	21489934	NM_016958.1	Krt14	NP_058654.1	ILMN_2722616	001470619	S	1564	CTGGAAGAGCCCCTGTATTGTCCCTATAGGCTTCACTCTTTACTTGACCC	11	-	100064522-100064571	11qD	Mus musculus keratin 14 (Krt14), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IDA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence ISO]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Krt1-14; Krt-1.14; K14; AI626930	Krt1-14; Krt-1.14; K14; AI626930
Mus musculus	MEEBO	ILMN_215923	ILMN_215923	H2-T10	scl015024.2_236	NM_010395.2			24475915	NM_010395.2	H2-T10		ILMN_2665266	000870446	S	1520	GGTCCTACCCCCAATGCTTCAGGGACATTTAATCAGGTCAAATTGGGATC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222456	ILMN_222456	CREB3L3	NM_145365.2	NM_145365.2		208677	31981758	NM_145365.2	Creb3l3	NP_663340.1	ILMN_2806996	005960474	S	1955	GCCCTGGGGTAGAACAGGAACCAGAGCCCTTTACCCATACATGCAGACAG	10	-	80487740-80487789	10qC1	Mus musculus cAMP responsive element binding protein 3-like 3 (Creb3l3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	CREB-H; BC010786; D10Bur1e	CREB-H; BC010786; D10Bur1e
Mus musculus	RefSeq	ILMN_211594	ILMN_261650	CD164L2	NM_027152.1	NM_027152.1		69655	115511039	NM_027152.1	Cd164l2	NP_081428.1	ILMN_2617449	003060270	S	788	CCCTGTAGGCACAAGGGCACCACGCAGGCTTAGTGCTGATGGCTGACATT	4	+	132780271-132780320	4qD2.3	Mus musculus CD164 sialomucin-like 2 (Cd164l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC130580; RP23-341B14.3; 2310047N01Rik	MGC130580; RP23-341B14.3; 2310047N01Rik
Mus musculus	RefSeq	ILMN_216567	ILMN_216567	HCN2	NM_008226.2	NM_008226.2		15166	88014633	NM_008226.2	Hcn2	NP_032252.1	ILMN_2672624	004230133	S	3142	CCCACGCCCCATTAACCCACAACCCCATTCCGCGCAATAAACGACAGCAT	10	+	79198800-79198849	10qC1	Mus musculus hyperpolarization-activated, cyclic nucleotide-gated K+ 2 (Hcn2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HAC1; BCNG2	HAC1; BCNG2
Mus musculus	RefSeq	ILMN_252426	ILMN_252426	NPM1	NM_008722.1	NM_008722.1		18148	6679107	NM_008722.1	Npm1	NP_032748.1	ILMN_2970473	006840433	S	899	TCCGGATGACTGACCAGGAGGCTATTCAAGATCTCTGGCAGTGGAGGAAA	11	-	33052821-33052852:33053986-33054003	11qA4	Mus musculus nucleophosmin 1 (Npm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; Any process that modulates the frequency, rate or extent of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 43516] [evidence IGI]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IDA]	MGC102162; NO38; MGC107291; B23	MGC102162; NO38; MGC107291; B23
Mus musculus	Riken	ILMN_206586	ILMN_206586	D930002M22RIK	ri|D930002M22|PX00200N22|AK086078|2512					AK086078	D930002M22Rik		ILMN_1257749	003420292	S	2283	GTGCCAAGAACAGGGCAGTGTCCATTGAGGTAGAGTCCTATTTCCATTTC										
Mus musculus	RefSeq	ILMN_188930	ILMN_230238	TXNDC10	NM_198295.2	NM_198295.2		67988	117606384	NM_198295.2	Txndc10	NP_938037.2	ILMN_1224339	000770201	S	1159	GGATGCGAGCGACATGGTCCAGTTCATTAATAGCATTTTGGATGGTACAG	18	+	90706542-90706591	18qE4	Mus musculus thioredoxin domain containing 10 (Txndc10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [evidence IEA]	6430411B10Rik; AV259382; mKIAA1830; A730024F05Rik	6430411B10Rik; AV259382; mKIAA1830; A730024F05Rik
Mus musculus	RefSeq	ILMN_188930	ILMN_230238	TXNDC10	NM_198295.2	NM_198295.2		67988	117606384	NM_198295.2	Txndc10	NP_938037.2	ILMN_1253737	000730592	S	1684	TCTTCCATAAGTAGGAAGATGTTTGGAACAAAGTGATGAACAGTTTGTCC	18	+	90709732-90709781	18qE4	Mus musculus thioredoxin domain containing 10 (Txndc10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [evidence IEA]	6430411B10Rik; AV259382; mKIAA1830; A730024F05Rik	6430411B10Rik; AV259382; mKIAA1830; A730024F05Rik
Mus musculus	RefSeq	ILMN_213365	ILMN_213365	IRF9	NM_008394.2	NM_008394.2		16391	31982244	NM_008394.2	Irf9	NP_032420.1	ILMN_2636339	006520133	S	180	ACCCGAAAGCTGCGGAGCTGGATCGTGGAGCAGGTGGAGAGTGGCCATTT	14	+	56223205-56223254	14qC3	Mus musculus interferon regulatory factor 9 (Irf9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Irf-9; p48	Irf-9; p48
Mus musculus	RefSeq	ILMN_213365	ILMN_213365	IRF9	NM_008394.2	NM_008394.2		16391	31982244	NM_008394.2	Irf9	NP_032420.1	ILMN_1233461	003060482	S	1634	GGAAAGTTCCAAAGGGTGTGATCTCAGAGGGAATTGTATGCTCCTCCCAG	14	+	56225617-56225666	14qC3	Mus musculus interferon regulatory factor 9 (Irf9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Irf-9; p48	Irf-9; p48
Mus musculus	MEEBO	ILMN_210881	ILMN_210881	MRPL19	scl0056284.1_41	NM_026490.1			13385975	NM_026490.1	Mrpl19		ILMN_2652226	005690475	S	2101	CCGGGCTGTTTTGAGCATATGACGAACCAACCCACTTAAGAACAGCGTTC						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence ISS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]		
Mus musculus	RefSeq	ILMN_197885	ILMN_329862	CYP2J12	NM_001100182.1	NM_001100182.1		242546	154147741	NM_001100182.1	Cyp2j12	NP_001093652.1	ILMN_1246579	005690414	S	1028	GGGTAATTGGACATGGAAGACAGCCAAGCACAGATGACCGAGACTCCATG				4qC5	Mus musculus cytochrome P450, family 2, subfamily j, polypeptide 12 (Cyp2j12), mRNA.					
Mus musculus	RefSeq	ILMN_185434	ILMN_252386	MKI67IP	NM_026472.3	NM_026472.3		67949	142350753	NM_026472.3	Mki67ip	NP_080748.2	ILMN_2714936	006200603	S	1268	GGTGTGTAGTTGTGTATCTAAACCCCTCCAAAATATGTCAGGCTTCAGCC	1	+	120229787-120229836	1qE2.3	Mus musculus Mki67 (FHA domain) interacting nucleolar phosphoprotein (Mki67ip), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C130020J04Rik; NIFK; AI852665	C130020J04Rik; NIFK; AI852665
Mus musculus	MEEBO	ILMN_224068	ILMN_224068	MYCS	scl7256.1.1_87				6754769	NM_010850	Mycs		ILMN_2774182	005820296	S	999	TCCGAGGTTGGGATCCCGGAACAACTCAGACTGGGAGAACATCGAGCGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	Riken	ILMN_202115	ILMN_202115	IDB2	ri|2810434H03|ZX00066O14|AK013239|958					AK013239	Idb2		ILMN_1236868	003130292	S	780	GAGTGTTGCGGGTGCCTCCTGTGTGCGCGTTTCGGTAATGTGCTTGTGTG										
Mus musculus	RefSeq	ILMN_217724	ILMN_217724	HMOX2	NM_010443.1	NM_010443.1		15369	6754213	NM_010443.1	Hmox2	NP_034573.1	ILMN_2893749	005550014	S	698	CACTGGGGAAGGGACCCAATTCTACCTGTTTGAGCATGTGGACAATGCCC	16	+	4764939-4764988	16qA1	Mus musculus heme oxygenase (decycling) 2 (Hmox2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA];  [goid 6788] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: heme + 3 donor-H2 + 3 O2 = biliverdin + Fe2+ + CO + 3 acceptor + 3 H2O [goid 4392] [evidence IEA]	HO-2	HO-2
Mus musculus	RefSeq	ILMN_215409	ILMN_248187	THBS1	NM_011580.3	NM_011580.3		21825	118130112	NM_011580.3	Thbs1	NP_035710.2	ILMN_2659151	003870670	S	3105	GACCCTAACTGGGTTGTCCGCCATCAGGGCAAAGAACTTGTCCAGACTGT	2	+	117948762-117948811	2qE5	Mus musculus thrombospondin 1 (Thbs1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	tbsp1; Thbs-1; TSP-1; TSP1	tbsp1; Thbs-1; TSP-1; TSP1
Mus musculus	RefSeq	ILMN_213932	ILMN_261912	AGMAT	NM_001081408.1	NM_001081408.1		75986	124487168	NM_001081408.1	Agmat	NP_001074877.1	ILMN_2642426	004480021	S	1314	CCACTGGCTGCAAACAAGGACAACTGGGACACTAACCCAAACAGCTCGTG	4	+	141315088-141315137	4qE1	Mus musculus agmatine ureohydrolase (agmatinase) (Agmat), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane; putrescine can be synthesized from arginine or ornithine and is the metabolic precursor of spermidine and spermine [goid 9446] [evidence IEA]; The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane [goid 8295] [evidence IEA]; The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups [goid 6596] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: agmatine + H2O = putrescine + urea [goid 8783] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2 [goid 16813] [evidence IEA]	5033405N08Rik	5033405N08Rik
Mus musculus	MEEBO	ILMN_211014	ILMN_211014	SSBP4	scl076900.1_165	XM_356132.1			38089669	XM_356132.1	Ssbp4		ILMN_1231896	001030475	S	1358	ACACACACAAACTCAAAAGGACCTCAGAGAAGTGCAGGCCTCTGGACCTC										
Mus musculus	MEEBO	ILMN_195990	ILMN_195990	D6ERTD349E	scl28691.10.1_28				33354241	NM_182784	D6Ertd349e		ILMN_2717150	001780682	S	2551	GGTGACAGATGGAATACCTTAGGGGAGGCAGCTGGTAACATCACAAAGGG										
Mus musculus	RefSeq	ILMN_221022	ILMN_314107	LOC100045612	XM_001474072.1	XM_001474072.1		100045612	149264501	XM_001474072.1	LOC100045612	XP_001474122.1	ILMN_2730026	000380047	S	1051	GTCCCCTTTCTATGGCAACTACACAAACTACGGGAACTTAAACGCAGCGC					PREDICTED: Mus musculus similar to iroquois-class homeobox protein IRX2 (LOC100045612), mRNA.					
Mus musculus	RefSeq	ILMN_222528	ILMN_222528	3110040N11RIK	NM_026077.1	NM_026077.1		67290	13385575	NM_026077.1	3110040N11Rik	NP_080353.1	ILMN_2882050	004250202	S	901	CCCAACATGGAATGGCTCCCAACTGCCTGTAACTCCAGTTTCAAGGGACC	7	-	81655584-81655633	7qD3	Mus musculus RIKEN cDNA 3110040N11 gene (3110040N11Rik), mRNA.				AI851475	AI851475
Mus musculus	Riken	ILMN_201660	ILMN_201660	1500001A10RIK	ri|1500001A10|R000020E13|AK005085|746					AK005085	1500001A10Rik		ILMN_1254948	007570470	S	107	GCAGCTGAGAGCCAAGCCAAGAGGTGAACCCAGCCGGGGAACCACCTTCT										
Mus musculus	RefSeq	ILMN_196184	ILMN_259899	LOC677008	XM_001003781.1	XM_001003781.1		677008	94364356	XM_001003781.1	LOC677008	XP_001003781.1	ILMN_1237466	003840575	S	1998	GACAGGATCTGACATAGCTTGGCATGGCCTGAATTTGCTGAGTAGCCAAG					PREDICTED: Mus musculus similar to 2B4, transcript variant 2 (LOC677008), mRNA.					
Mus musculus	RefSeq	ILMN_224151	ILMN_257995	GDF2	NM_019506.4	NM_019506.4		12165	118130679	NM_019506.4	Gdf2	NP_062379.3	ILMN_2775678	002850767	S	2686	GAGCCCGAAGGACTTCAAAACATCTGGACAACTCTCATTGACTGATGCTC	14	+	34760082-34760131	14qB	Mus musculus growth differentiation factor 2 (Gdf2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MGC124253; MGC124256; Bmp9; MGC124255	MGC124253; MGC124256; Bmp9; MGC124255
Mus musculus	MEEBO	ILMN_192902	ILMN_192902	2900064A13RIK	scl098979.1_88				19526955	NM_133749	2900064A13Rik		ILMN_2492395	004150187	S	3	CCAACTTGTGCTTGAATCTTGAAACCTATTGGTTGCAGCCAATACCAAGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_202671	ILMN_202671	B230104F01RIK	ri|B230104F01|PX00068M18|AK020955|1087					AK020955	B230104F01Rik		ILMN_1246417	000650544	S	914	TTCATCCTCCTTGGAAGCGCCACCCAGTTACCCATGGCCGCACATTAGGG										
Mus musculus	RefSeq	ILMN_200580	ILMN_200580	LOC383376	XM_357018.1	XM_357018.1			38083886	XM_357018.1	LOC383376		ILMN_2539256	005340215	S	10	CTTCCAGTCCACAGGCCCTTGGGGATGATTCATAGCAAGACCACACCAGC										
Mus musculus	RefSeq	ILMN_223430	ILMN_223430	SCIN	NM_009132.1	NM_009132.1		20259	6677870	NM_009132.1	Scin	NP_033158.1	ILMN_1259174	003800671	S	2341	GCTTCTAAGCATTTCCCCGTCTGCTACTCTGTTTGCAGTGAGCTTTACTT	12	-	40786619-40786668	12qB1	Mus musculus scinderin (Scin), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AW545522; adseverin	AW545522; adseverin
Mus musculus	RefSeq	ILMN_219615	ILMN_219615	KRT18	NM_010664.1	NM_010664.1		16668	6754481	NM_010664.1	Krt18	NP_034794.1	ILMN_2711267	000990424	S	1101	CCAGCGCCAGGCCCAGGAATATGAAGCCCTCTTGAACATCAAGGTGAAGC	15	+	101861846-101861895	15qF3	Mus musculus keratin 18 (Krt18), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor [goid 33209] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Krt1-18; K18; CK18; Endo B	Krt1-18; K18; CK18; Endo B
Mus musculus	RefSeq	ILMN_209499	ILMN_209499	KCNA6	NM_013568.5	NM_013568.5		16494	142343730	NM_013568.5	Kcna6	NP_038596.1	ILMN_3163078	003370019	A	3034	GGAGCTGCATTGGGCCTGCTAAGGTAACTCGGTCGTTCCTACTTGGACCA	6	-	126687088-126687137	6qF3	Mus musculus potassium voltage-gated channel, shaker-related, subfamily, member 6 (Kcna6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MK1.6; Kv1.6	MK1.6; Kv1.6
Mus musculus	MEEBO	ILMN_193472	ILMN_193472	SCL0001883.1_112	scl0001883.1_112	AK086973.1			26103922	AK086973.1	scl0001883.1_112		ILMN_2497508	001690343	S	8	GTTCCCGTAAGCCATTCGAGTTACAATTCCTTTCTGGAGCCGGGCAACTT										
Mus musculus	RefSeq	ILMN_189473	ILMN_237775	4732460K03RIK	XM_888335.2	XM_888335.2		58894	94377360	XM_888335.2	4732460K03Rik	XP_893428.1	ILMN_2461582	000130358	S	4144	CAGGGACAAAGATGACTGGTCCAGGATGCTCTGGGCTCCTGCTTTCAAGG	6	+	48464295-48464344		PREDICTED: Mus musculus RIKEN cDNA 4732460K03 gene, transcript variant 1 (4732460K03Rik), mRNA.					
Mus musculus	MEEBO	ILMN_188170	ILMN_188170	DNAJC6	scl25223.1.19_5				38259193	NM_198412	Dnajc6		ILMN_2733605	006940537	S	4987	TATGATCCTGGACGCCTGTCTATCTCAAAACTCTTAACACGTGCAGACCA							The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188170	ILMN_188170	DNAJC6	scl25223.1.19_5				38259193	NM_198412	Dnajc6		ILMN_1256627	001510719	S	1	TAAGAGCCGGAGGCTGCTGTCGGTGCTGCGGCGGTGGCGCGCGGATCAGC							The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200160	ILMN_200160	LOC385830	XM_358963.1	XM_358963.1			38080736	XM_358963.1	LOC385830		ILMN_1218305	003170202	S	1018	ACAGAAAAGAAGCAATACAAGGACGGAAATCACGCCCTAGAACAACTAAG										
Mus musculus	Riken	ILMN_207408	ILMN_207408	G630024G08RIK	ri|G630024G08|PL00013M17|AK090243|1515					AK090243	G630024G08Rik		ILMN_1258267	002690632	S	1383	CTGTGCCATGTGTAAATGACAGCTCTGTGGTGGGTTGGATTCTTCAGCTG										
Mus musculus	RefSeq	ILMN_213360	ILMN_213360	NT5E	NM_011851.3	NM_011851.3		23959	142350747	NM_011851.3	Nt5e	NP_035981.1	ILMN_2636285	004180471	S	2976	CAACCACTGTAAGGCATACTCAGGTCAAGACATGAGAAGACCAGCAGGAC	9	+	88266354-88266403	9qE3.1	Mus musculus 5' nucleotidase, ecto (Nt5e), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Nt5; eNT; NT; CD73; AI447961; 2210401F01Rik	Nt5; eNT; NT; CD73; AI447961; 2210401F01Rik
Mus musculus	RefSeq	ILMN_197689	ILMN_197689	LOC381487	XM_358597.1	XM_358597.1			38077403	XM_358597.1	LOC381487		ILMN_1230981	000150711	S	544	GCCAGGTTGGGCAGTGGAAAGTGCTGGTCACCCAGGAGATGGAGCTGTAT										
Mus musculus	MEEBO	ILMN_195641	ILMN_195641	TPTE	scl000678.1_45	NM_181851.3			40549438	NM_181851.3	Tpte		ILMN_2517375	003310465	S	18	GTCCTTAACTATGCACCCTGAAATACTGTCTCACTGTGAAAAGCTGTAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]				
Mus musculus	MEEBO	ILMN_214149	ILMN_214149	PDZK4	scl0002940.1_142	XM_359337.1			38087058	XM_359337.1	Pdzk4		ILMN_2644821	000460070	S	212	CACTCAGACCGACATCACCTTCGAGCATATCATGGCGCTGGGCAAGCTGC										
Mus musculus	RefSeq	ILMN_193732	ILMN_242499	AK5	NM_001081277.1	NM_001081277.1		229949	124486886	NM_001081277.1	Ak5	NP_001074746.1	ILMN_2499914	002340554	S	155	TGCACAGCTGCCCGGGAGTCGCTGAGGGGACCCCGGCCTGAGCGCATCCA	3	-	152330900-152330949	3qH3	Mus musculus adenylate kinase 5 (Ak5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195757	ILMN_242499	AK5	NM_001081277.1	NM_001081277.1		229949	124486886	NM_001081277.1	Ak5	NP_001074746.1	ILMN_2683792	000290025	S	1850	AGCGTCCATCCCCGTCGTCACCTACTACGAGAGGAAAACACAGCTACGGA	3	-	152135722-152135771	3qH3	Mus musculus adenylate kinase 5 (Ak5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]		
Mus musculus	RefSeq	ILMN_250855	ILMN_250855	MARK2	NM_007928.2	NM_007928.2		13728	122937358	NM_007928.2	Mark2	NP_031954.2	ILMN_3127066	001660523	A	4344	CCCAGACCAGGCTCAGCAACACATTGAGTCTTGGGTTCCAGGAACCTTGC	19	-	7350140-7350189	19qA	Mus musculus MAP/microtubule affinity-regulating kinase 2 (Mark2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region that lies just beneath the plasma membrane on the basal edge of a cell [goid 45180] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA4207; AU024026; Emk; KIAA4207; Par-1	mKIAA4207; AU024026; Emk; KIAA4207; Par-1
Mus musculus	RefSeq	ILMN_197818	ILMN_197818	LOC214377	XM_205466.2	XM_205466.2			38078480	XM_205466.2	LOC214377		ILMN_1214438	003120440	S	1331	TCAGATTCAGAGACCCCCAGGCCCCTGCTGTAGATGTGGTCAGCAAGGTC										
Mus musculus	MEEBO	ILMN_190979	ILMN_190979	2700049H19RIK	scl20304.1.15_274						2700049H19Rik		ILMN_1229329	001580736	S	1	GCCTCCAATCCTGGACACAGAGCCTGCACCGAAGAGGGCATTTCTGAAAT										
Mus musculus	RefSeq	ILMN_219500	ILMN_219500	ZGPAT	NM_144894.3	NM_144894.3		229007	114326530	NM_144894.3	Zgpat	NP_659143.1	ILMN_2709700	000160500	S	2171	GCTGAGTAGAGGTGGGACATCAGGGCTGATTTTGAACACTTATCTGCCCA	2	+	181115380-181115429	2qH4	Mus musculus zinc finger, CCCH-type with G patch domain (Zgpat), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC25688; 1500006I01Rik; MGC38468; BC021513	MGC25688; 1500006I01Rik; MGC38468; BC021513
Mus musculus	RefSeq	ILMN_223203	ILMN_327036	NDUFA12L	XM_001476048.1	XM_001476048.1		75597	149264689	XM_001476048.1	Ndufa12l	XP_001476098.1	ILMN_1222174	000130270	S	594	GAATGACAAAGTCAATGAATGCCCTGCCCTGAAGTCATAGCATTGTAAGG	13	-	108842819-108842868	13qD2.1	PREDICTED: Mus musculus Ndufa12-like (Ndufa12l), mRNA.					
Mus musculus	MEEBO	ILMN_194804	ILMN_194804	MIA1	scl012587.2_41				9506478	NM_019394	Mia1		ILMN_2777087	001030082	S	415	CCCCAGTAGCATTGTCCGGGAGGACCTGACTCTGAAACCTGGCAAAATTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197660	ILMN_197660	LOC380979	XM_354888.1	XM_354888.1			38077179	XM_354888.1	LOC380979		ILMN_2528910	006370056	S	705	TCTGCAGTGCCCCATGCAGCGGGAATGTGGCAGTAAGCACTGGCCTGTGT										
Mus musculus	Riken	ILMN_203466	ILMN_203466	AXL	ri|8030472I18|PX00104C03|AK033237|2611					AK033237	Axl		ILMN_2557510	005080646	S	2527	CGAAGGAAGGCTACGGCTGACCTCTAGCTGGCTCTCGAGGGGCCTGTATT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_192300	ILMN_192300	9030418K01RIK	scl19804.2_446						9030418K01Rik		ILMN_2486829	001450053	S	5	ACGCAAAAGGAAGGCCCCTGAACCTGTGAGCTGTTGGGCTTATGTTCTAG										
Mus musculus	RefSeq	ILMN_222415	ILMN_258470	1700011H22RIK	XM_914392.2	XM_914392.2		69314	94372055	XM_914392.2	1700011H22Rik	XP_919485.1	ILMN_1258838	005820731	S	1060	CAGCATCTCAAAAACTGGAATATAGCTTAGGGTTTCTCCAGTGAACATCC				4qC5	PREDICTED: Mus musculus RIKEN cDNA 1700011H22 gene (1700011H22Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	MEEBO	ILMN_190492	ILMN_190492	4921506I22RIK	scl52818.4_61				27754119	NM_025717	4921506I22Rik		ILMN_2470628	006350187	S	20	TGAGTATTTTCTATAAGTTTATGCCACAGGTTTACTTGGCCTGTTGATGA										
Mus musculus	MEEBO	ILMN_190492	ILMN_190492	4921506I22RIK	scl52818.4_61				27754119	NM_025717	4921506I22Rik		ILMN_1247535	005360687	S	20	ATTAGCTGAGTACAAAAATACCTGCATATGTAAGCAAGAGCCAATCACTC										
Mus musculus	RefSeq	ILMN_192297	ILMN_227593	SPINT1	NM_016907.3	NM_016907.3		20732	133778981	NM_016907.3	Spint1	NP_058603.2	ILMN_1237186	001740114	S	2209	TAGAGTGTGTGTGGTCACCCTGAGCTCTCTACACCGAACCACAAGCTACA	2	+	119075184-119075233	2qE5	Mus musculus serine protease inhibitor, Kunitz type 1 (Spint1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	HAI-1	HAI-1
Mus musculus	RefSeq	ILMN_192297	ILMN_227593	SPINT1	NM_016907.3	NM_016907.3		20732	133778981	NM_016907.3	Spint1	NP_058603.2	ILMN_2621463	000240468	S	1873	CTCAGCTGCACTCAGGCCAGTTCTGGAGAAGGCCCAAGAGTCTGGAAGGA	2	+	119074848-119074897	2qE5	Mus musculus serine protease inhibitor, Kunitz type 1 (Spint1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	HAI-1	HAI-1
Mus musculus	RefSeq	ILMN_200622	ILMN_200622	LOC383404	XM_357032.1	XM_357032.1			38084403	XM_357032.1	LOC383404		ILMN_2539411	001990039	S	9	ACAGCCTGTGCGTGGAGTCGAGAGTCCCACGGTCCCCAAAGGAACTGATC										
Mus musculus	RefSeq	ILMN_214472	ILMN_214472	EG381438	NM_198657.1	NM_198657.1		381438	38348547	NM_198657.1	EG381438	NP_941059.1	ILMN_2998738	000150673	S	681	GGGCCCAAGAGAAAGCATTCCACCATGTCTTATGTGGAGTCTCACCAGCC	3	-	37906223-37906272	3qB	Mus musculus predicted gene, EG381438 (EG381438), mRNA.					
Mus musculus	RefSeq	ILMN_219460	ILMN_226177	6430517E21RIK	NM_207583.1	NM_207583.1		240843	46485768	NM_207583.1	6430517E21Rik	NP_997466.1	ILMN_1253269	001010176	S	3944	TTGACTTGTTCCAAGAGCCCCTCACAGTTCATCCGGAGCCCTCTTCCCAC	1	-	160175573-160175622	1qH1	Mus musculus RIKEN cDNA 6430517E21 gene (6430517E21Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			BB361039; mKIAA1747	BB361039; mKIAA1747
Mus musculus	RefSeq	ILMN_222798	ILMN_222798	PHLDA1	NM_009344.1	NM_009344.1		21664	6678268	NM_009344.1	Phlda1	NP_033370.1	ILMN_2754985	004480180	S	1450	GATCAAGTAGTTTGGACTTCACCCGACGGATAACGCGCGCTTGCAGTTCC	10	+	110912256-110912305	10qD1	Mus musculus pleckstrin homology-like domain, family A, member 1 (Phlda1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of FasL (CD95), an antigen originally found to be expressed on the cell surface of activated human T-lymphocytes and B-lymphocytes and a variety of malignant human lymphoid cell lines [goid 45210] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		TDAG51; Tdag; DT1P1B11	TDAG51; Tdag; DT1P1B11
Mus musculus	RefSeq	ILMN_198104	ILMN_198104	EG240038	XM_139814.9	XM_139814.9		240038	149268619	XM_139814.9	EG240038	XP_139814.9	ILMN_1244199	001070102	S	1323	GTGAATGTGACAAATCTTTTGCCCTGAATGCCAGGCTCAGGTGTCATCGG	17	-	22337235-22337284	17qA3.3	PREDICTED: Mus musculus predicted gene, EG240038, transcript variant 1 (EG240038), mRNA.					
Mus musculus	RefSeq	ILMN_214159	ILMN_214159	PLEKHF1	NM_024413.1	NM_024413.1		72287	21313555	NM_024413.1	Plekhf1	NP_077724.1	ILMN_2644920	007570035	S	573	TTGTGGTCTGTGCTGAGTGTTCCAGGGAGCGTTTCCTGTTGCCACGTCTC	7	-	39006574-39006623	7qB2	Mus musculus pleckstrin homology domain containing, family F (with FYVE domain) member 1 (Plekhf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	APPD; 1810013P09Rik; ZFYVE15; PHAFIN1; LAPF	APPD; 1810013P09Rik; ZFYVE15; PHAFIN1; LAPF
Mus musculus	RefSeq	ILMN_214159	ILMN_214159	PLEKHF1	NM_024413.1	NM_024413.1		72287	21313555	NM_024413.1	Plekhf1	NP_077724.1	ILMN_2993334	001660685	S	1227	GCCAGATATCACCACCTGGCAACCGGGTCCTTCCAAACTGGACGCCAGAT	7	-	39005920-39005969	7qB2	Mus musculus pleckstrin homology domain containing, family F (with FYVE domain) member 1 (Plekhf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	APPD; 1810013P09Rik; ZFYVE15; PHAFIN1; LAPF	APPD; 1810013P09Rik; ZFYVE15; PHAFIN1; LAPF
Mus musculus	RefSeq	ILMN_189564	ILMN_244743	TARBP2	NM_009319.1	NM_009319.1		21357	6678220	NM_009319.1	Tarbp2	NP_033345.1	ILMN_2649955	000010142	S	537	CTGTCTCTCCTCAGCAGTCTGAATGCAACCCCGTCGGTGCTCTGCAGGAG	15	+	102352181-102352227:102352412-102352414	15qF3	Mus musculus TAR (HIV) RNA binding protein 2 (Tarbp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	Prbp	Prbp
Mus musculus	RefSeq	ILMN_244743	ILMN_244743	TARBP2	NM_009319.1	NM_009319.1		21357	6678220	NM_009319.1	Tarbp2	NP_033345.1	ILMN_2939990	006330379	S	1313	GCCTTGAGACTGAGGAAGGCACAGGCAAGCAAGGAGCCATGAACCACAGG	15	+	102353897-102353946	15qF3	Mus musculus TAR (HIV) RNA binding protein 2 (Tarbp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	Prbp	Prbp
Mus musculus	RefSeq	ILMN_210490	ILMN_328035	4833413E03RIK	XM_001472513.1	XM_001472513.1		78104	149269178	XM_001472513.1	4833413E03Rik	XP_001472563.1	ILMN_1221471	001510369	S	714	ACAGGCCAAGACTCCACCCCGCCACAGGATGGACCTCACTTCACACTTCA					PREDICTED: Mus musculus RIKEN cDNA 4833413E03 gene (4833413E03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199273	ILMN_199273	LOC245297	XM_143006.1	XM_143006.1			20963465	XM_143006.1	LOC245297		ILMN_2534655	001110019	S	229	AGTGCCCTCCGCCTGCGCCCACACCCGGGAAAAGTTTCTGGTACCCCAAA										
Mus musculus	RefSeq	ILMN_214664	ILMN_214664	TMED3	NM_025360.1	NM_025360.1		66111	13384723	NM_025360.1	Tmed3	NP_079636.1	ILMN_2850937	004880619	S	797	GTGACACAGAGAAGAGGGAGAGCAGCAGGGAGACCAAAGGCGCACATATC	9	-	89594466-89594515	9qE3.1	Mus musculus transmembrane emp24 domain containing 3 (Tmed3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1200002G13Rik; AW546672; P24b	1200002G13Rik; AW546672; P24b
Mus musculus	RefSeq	ILMN_214664	ILMN_214664	TMED3	NM_025360.1	NM_025360.1		66111	13384723	NM_025360.1	Tmed3	NP_079636.1	ILMN_2650532	002710445	S	420	CTACTTTGACTTCCAAGTGGGTGACGAGCCCCCCATTCTCCCAGACATGG	9	-	89597635-89597684	9qE3.1	Mus musculus transmembrane emp24 domain containing 3 (Tmed3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1200002G13Rik; AW546672; P24b	1200002G13Rik; AW546672; P24b
Mus musculus	MEEBO	ILMN_195589	ILMN_195589	IGKV13-78-1_AJ132671_IG_KAPPA_VARIABLE_13-78-1_5	IGKV13-78-1_AJ132671_Ig_kappa_variable_13-78-1_5						IGKV13-78-1_AJ132671_Ig_kappa_variable_13-78-1_5		ILMN_1255064	007320315	S	1	GCTTCCCTCCCAGTTTTTGGTGTCCTTGCTGATTTTGATCGCAAGCACAA										
Mus musculus	Riken	ILMN_204097	ILMN_204097	3230401M21RIK	ri|9830132D09|PX00118K11|AK036541|4536					AK036541	3230401M21Rik		ILMN_1228383	005340475	S	4360	CTCTGCCTGCTTCCCTTACACAACCCAGGACCACCGGCCCAGAAGTGTCA										
Mus musculus	RefSeq	ILMN_215021	ILMN_215021	CPOX	NM_007757.1	NM_007757.1		12892	6681006	NM_007757.1	Cpox	NP_031783.1	ILMN_2739182	006900253	S	2911	AATAATAGTCTGACTGCGCTATGTTACTTGATTTATAATATATTGAATTT	16	+	58680313-58680362	16qC1.2	Mus musculus coproporphyrinogen oxidase (Cpox), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: coproporphyrinogen-III + O2 + 2 H+ = protoporphyrinogen-IX + 2 CO2 + 2 H2O [goid 4109] [evidence IEA]	clone 560; HCP; Cpo; CPX	clone 560; HCP; Cpo; CPX
Mus musculus	RefSeq	ILMN_215021	ILMN_215021	CPOX	NM_007757.1	NM_007757.1		12892	6681006	NM_007757.1	Cpox	NP_031783.1	ILMN_1249402	000510398	S	745	CTGAGGAAGCAGCGAACCAAATGAGAGGCAGAGGCAAAACTCTGAAGACG	16	+	58672726-58672775	16qC1.2	Mus musculus coproporphyrinogen oxidase (Cpox), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: coproporphyrinogen-III + O2 + 2 H+ = protoporphyrinogen-IX + 2 CO2 + 2 H2O [goid 4109] [evidence IEA]	clone 560; HCP; Cpo; CPX	clone 560; HCP; Cpo; CPX
Mus musculus	RefSeq	ILMN_215021	ILMN_215021	CPOX	NM_007757.1	NM_007757.1		12892	6681006	NM_007757.1	Cpox	NP_031783.1	ILMN_2972755	002000129	S	2783	CGGCGTTCCCCCGTACTGGGGCATATAAAGTTTGCAAGACCAAGGGGCCT	16	+	58680185-58680234	16qC1.2	Mus musculus coproporphyrinogen oxidase (Cpox), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: coproporphyrinogen-III + O2 + 2 H+ = protoporphyrinogen-IX + 2 CO2 + 2 H2O [goid 4109] [evidence IEA]	clone 560; HCP; Cpo; CPX	clone 560; HCP; Cpo; CPX
Mus musculus	RefSeq	ILMN_199601	ILMN_199601	LOC383722	XM_357207.1	XM_357207.1			38074927	XM_357207.1	LOC383722		ILMN_2535811	001070537	S	98	GCTTAAAGCCCAGGACCGTTATTAGAGCCACAGACCTAACTGCTGAGCTC										
Mus musculus	MEEBO	ILMN_214582	ILMN_214582	2900027G03RIK	scl072865.1_125	NM_028375.2			31560073	NM_028375.2	2900027G03Rik		ILMN_1248650	001470739	S	563	GAACACTGTCTGGTTTCCAGCTACAAGATGAGCTCCTGTCGTTTAGTGGG										
Mus musculus	RefSeq	ILMN_215270	ILMN_215270	MTAP1S	NM_173013.2	NM_173013.2		270058	141802735	NM_173013.2	Mtap1s	NP_766601.1	ILMN_2657432	005390273	S	3009	GTGCAAAGCTAGATCCCGTGCTTAAGTGAGCCACCGTGTGACATCCCAGC	8	+	73441176-73441225	8qB3.3	Mus musculus microtubule-associated protein 1S (Mtap1s), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]	A process that results in a parallel arrangement of microtubules [goid 1578] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISS]; The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites [goid 48812] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 16297881] [evidence IEP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 15528209] [evidence IEP]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with the microtubule constituent protein beta-tubulin [goid 48487] [evidence ISS]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	6430517J16Rik; Bpy2ip1; VCY2IP1; MAP1S; Map8	6430517J16Rik; Bpy2ip1; VCY2IP1; MAP1S; Map8
Mus musculus	RefSeq	ILMN_241668	ILMN_241668	MAFA	NM_194350.1	NM_194350.1		378435	34996508	NM_194350.1	Mafa	NP_919331.1	ILMN_3157896	004830634	A	925	CTGGCCAAGGAGCGGGACCTGTACAAGGAGAAATACGAGAAGTTGGCGGG	15	-	75577378-75577427	15qD3	Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family, protein A (avian) (Mafa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	RIPE3b1	RIPE3b1
Mus musculus	RefSeq	ILMN_241668	ILMN_241668	MAFA	NM_194350.1	NM_194350.1		378435	34996508	NM_194350.1	Mafa	NP_919331.1	ILMN_3078590	006400026	I	311	GCGCCTCAGGAAAAGCGGTGCTGGAGGATCTGTACTGGATGAGCGGGTAC	15	-	75577992-75578041	15qD3	Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family, protein A (avian) (Mafa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	RIPE3b1	RIPE3b1
Mus musculus	RefSeq	ILMN_198552	ILMN_198552	LOC209296	XM_125384.2	XM_125384.2			38086134	XM_125384.2	LOC209296		ILMN_1248894	005960608	S	101	GCAGAATTCATGATGGGGTCGCAGGGTGGGAAATTATGCCAAACGGGATC										
Mus musculus	RefSeq	ILMN_186815	ILMN_229556	3110043O21RIK	NM_001081343.1	NM_001081343.1		73205	124486790	NM_001081343.1	3110043O21Rik	NP_001074812.1	ILMN_2438727	002510367	S	2582	CCCGTGTCACCTGCATCATAGGAACAGCAGAGAAATCTGACCCAGTGCTA	4	-	35139097-35139146	4qA5	Mus musculus RIKEN cDNA 3110043O21 gene (3110043O21Rik), mRNA.				AI840585; RP23-307M2.1	AI840585; RP23-307M2.1
Mus musculus	RefSeq	ILMN_200700	ILMN_200700	LOC384494	XM_357672.1	XM_357672.1			38085288	XM_357672.1	LOC384494		ILMN_1221171	001820427	S	85	CCCAACGATCCCTATGAAGAGCACGGCACAGAGGATATCAAGGGATCAGG										
Mus musculus	RefSeq	ILMN_190721	ILMN_240635	DDO	NM_027442.4	NM_027442.4		70503	141801737	NM_027442.4	Ddo	NP_081718.2	ILMN_2693185	007150671	S	2767	GTTTCGTGTGCGATTTTGTTTGAAGAGAGCACTGAGCTGGGGTTTCATAC	10	+	40369528-40369577	10qB1	Mus musculus D-aspartate oxidase (Ddo), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid [goid 6531] [evidence IMP]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The introduction of semen or sperm into the genital tract of a female [goid 7320] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 3884] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: D-aspartate + H2O + O2 = oxaloacetate + NH3 + H2O2 [goid 8445] [evidence IEA]	5330420D20Rik; 5730402C02Rik; AI467244	5330420D20Rik; 5730402C02Rik; AI467244
Mus musculus	RefSeq	ILMN_190721	ILMN_240635	DDO	NM_027442.4	NM_027442.4		70503	141801737	NM_027442.4	Ddo	NP_081718.2	ILMN_1238706	005960739	S	462	GGCTTTTACAACCCTGAAGTGCGAGACTTCTGCCTACCTCCCGTGGCTGG	10	+	40357271-40357320	10qB1	Mus musculus D-aspartate oxidase (Ddo), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid [goid 6531] [evidence IMP]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The introduction of semen or sperm into the genital tract of a female [goid 7320] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 3884] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: D-aspartate + H2O + O2 = oxaloacetate + NH3 + H2O2 [goid 8445] [evidence IEA]	5330420D20Rik; 5730402C02Rik; AI467244	5330420D20Rik; 5730402C02Rik; AI467244
Mus musculus	RefSeq	ILMN_218585	ILMN_258724	KRT42	NM_212483.2	NM_212483.2		68239	154090940	NM_212483.2	Krt42	NP_997648.2	ILMN_2697643	002850246	S	1472	GTGCTGCCCCTTACAGAGAGGCCCCTTGGGTTGACCCCAGAAATTGCTAA				11qD	Mus musculus keratin 42 (Krt42), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Ka22; 2410039E07Rik; ecat6; K17n	Ka22; 2410039E07Rik; ecat6; K17n
Mus musculus	RefSeq	ILMN_218585	ILMN_258724	KRT42	NM_212483.2	NM_212483.2		68239	154090940	NM_212483.2	Krt42	NP_997648.2	ILMN_2701160	001430411	S	1219	ACTCAATACTCCTCATCCCTGGCTTCGCAGCCCTCCCGAGAAGGCATGGT				11qD	Mus musculus keratin 42 (Krt42), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Ka22; 2410039E07Rik; ecat6; K17n	Ka22; 2410039E07Rik; ecat6; K17n
Mus musculus	RefSeq	ILMN_217705	ILMN_217705	BMP1	NM_009755.2	NM_009755.2		12153	42734446	NM_009755.2	Bmp1	NP_033885.2	ILMN_1218116	006580240	S	3067	GGCTTCCACCTGCGGTACACAAGCACCAAGTTCCAGGACACACTCCACAG	14	-	70874932-70874981	14qD2	Mus musculus bone morphogenetic protein 1 (Bmp1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	TLD	TLD
Mus musculus	RefSeq	ILMN_217705	ILMN_217705	BMP1	NM_009755.2	NM_009755.2		12153	42734446	NM_009755.2	Bmp1	NP_033885.2	ILMN_2989955	006940278	S	3633	CATCAGCCACACCAGGGCACCCCAGCCAATAAACAGAAAGTGTTACAGCC	14	-	70874366-70874415	14qD2	Mus musculus bone morphogenetic protein 1 (Bmp1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	TLD	TLD
Mus musculus	RefSeq	ILMN_217705	ILMN_217705	BMP1	NM_009755.2	NM_009755.2		12153	42734446	NM_009755.2	Bmp1	NP_033885.2	ILMN_2713538	001340338	S	3069	GCTTCCACCTGCGGTACACAAGCACCAAGTTCCAGGACACACTCCACAGC	14	-	70874930-70874979	14qD2	Mus musculus bone morphogenetic protein 1 (Bmp1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	TLD	TLD
Mus musculus	RefSeq	ILMN_217705	ILMN_217705	BMP1	NM_009755.2	NM_009755.2		12153	42734446	NM_009755.2	Bmp1	NP_033885.2	ILMN_1255558	007400368	S	1072	GACCCGACTCAGCAAGGGGGACATCGCTCAGGCCCGGAAGCTCTACAAAT	14	-	70905144-70905193	14qD2	Mus musculus bone morphogenetic protein 1 (Bmp1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	TLD	TLD
Mus musculus	RefSeq	ILMN_199089	ILMN_227021	ARMC2	NM_001034858.2	NM_001034858.2		213402	118131063	NM_001034858.2	Armc2	NP_001030030.1	ILMN_2534009	002190672	S	1805	ATTGGCACAGCTGATAAAGGAAATGACGGAGGACACGGAGAAGCACGGCG	10	-	41683479-41683528	10qB2	Mus musculus armadillo repeat containing 2 (Armc2), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2610018I05Rik	2610018I05Rik
Mus musculus	RefSeq	ILMN_199095	ILMN_227021	ARMC2	NM_001034858.2	NM_001034858.2		213402	118131063	NM_001034858.2	Armc2	NP_001030030.1	ILMN_1259351	002940608	S	2751	CTCACGGTGGACAAGGAGAAGCGAGCCATTCTGAAAGAAGGTGGTGGCAT	10	-	41642377-41642426	10qB2	Mus musculus armadillo repeat containing 2 (Armc2), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2610018I05Rik	2610018I05Rik
Mus musculus	RefSeq	ILMN_211516	ILMN_211516	RCE1	NM_023131.1	NM_023131.1		19671	12963506	NM_023131.1	Rce1	NP_075620.1	ILMN_1235234	004290445	S	991	CGATCACTCTTTTGTGCACTCCAGTGAACTCTGACGGGCTCTCCAGCTCC	19	-	4622956-4623005	19qA	Mus musculus RCE1 homolog, prenyl protein peptidase (S. cerevisiae) (Rce1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	D19Ertd98e; D19Ertd283e	D19Ertd98e; D19Ertd283e
Mus musculus	RefSeq	ILMN_212807	ILMN_228879	2210409D07RIK	XM_923487.2	XM_923487.2		70157	94404900	XM_923487.2	2210409D07Rik	XP_928580.1	ILMN_2630530	005260152	S	335	GCTCATCTACTAATCCCCAGAAAGATATGTGTACATAGTTCACCTTCCCA				18qD3	PREDICTED: Mus musculus RIKEN cDNA 2210409D07 gene (2210409D07Rik), mRNA.					
Mus musculus	MEEBO	ILMN_217871	ILMN_217871	6530406M24RIK	scl076223.9_11	NM_178630.2			31340886	NM_178630.2	6530406M24Rik		ILMN_2698834	000540072	S	3614	GTTACAAATAAAGTATTCTGAAATTTAGCTAATGTAGTAGTGCTTAGATT										
Mus musculus	MEEBO	ILMN_217871	ILMN_217871	6530406M24RIK	scl076223.9_11	NM_178630.2			31340886	NM_178630.2	6530406M24Rik		ILMN_2688622	001190164	S	687	CCCGAGTTGGGGGTAACCGAACATCCTTGAAACAACCTGTGGATAACTGT										
Mus musculus	Riken	ILMN_205613	ILMN_205613	B930097J01RIK	ri|B930097J01|PX00166N21|AK047604|3109					AK047604	B930097J01Rik		ILMN_1232585	005290181	S	2769	CTTGGGAGGCTTGGAGGACATCACTGGAAGTAGAGCAGATGGGGAGCAGC										
Mus musculus	MEEBO	ILMN_192350	ILMN_192350	TUBA8	scl29555.5_307				8394492	NM_017379	Tuba8		ILMN_2487308	005560477	S	11	TGTTGGAGAGGGTATGGAAGAAGGAGAGTTTTCTGAGGCCAGGGAGGACC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence ISA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence ISA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence ISA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_204245	ILMN_222281	ZFP804A	NM_175513.3	NM_175513.3		241514	124430544	NM_175513.3	Zfp804a	NP_780722.2	ILMN_1241450	005050300	S	946	AGGTAACTCTCCTCCACCCGAGGCCATGTGTACTGACAAAGCAACTGCTC	2	+	82096798-82096847	2qD	Mus musculus zinc finger protein 804A (Zfp804a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RP23-121B24.1; C630007C17Rik	RP23-121B24.1; C630007C17Rik
Mus musculus	RefSeq	ILMN_204816	ILMN_222281	ZFP804A	NM_175513.3	NM_175513.3		241514	124430544	NM_175513.3	Zfp804a	NP_780722.2	ILMN_1214586	002570397	S	1424	GTGCTTCAGTGGCCATCAGAAATGCTTGCTTATACAACTACAGAGCCATC	2	+	82097276-82097325	2qD	Mus musculus zinc finger protein 804A (Zfp804a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RP23-121B24.1; C630007C17Rik	RP23-121B24.1; C630007C17Rik
Mus musculus	RefSeq	ILMN_222281	ILMN_222281	ZFP804A	NM_175513.3	NM_175513.3		241514	124430544	NM_175513.3	Zfp804a	NP_780722.2	ILMN_2747364	002490204	S	3469	CTTCAAAGTGCTTCAGCCACACCAACAGTTCCTTCCCCAGGTCCCTGCTC	2	+	82099321-82099370	2qD	Mus musculus zinc finger protein 804A (Zfp804a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RP23-121B24.1; C630007C17Rik	RP23-121B24.1; C630007C17Rik
Mus musculus	Riken	ILMN_204085	ILMN_204085	A730043L23RIK	ri|A730043L23|PX00150H07|AK042960|3849					AK042960	A730043L23Rik		ILMN_1221280	002650088	S	3474	GCGACGGGACTTGAGTTCCCTTTGTTCTCTGACGTGTGTCAAGCGCCCAG										
Mus musculus	RefSeq	ILMN_259099	ILMN_259099	2610034M16RIK	NM_027001.1	NM_027001.1		69239	110625716	NM_027001.1	2610034M16Rik	NP_081277.1	ILMN_2980212	002850369	S	3839	TGGCTTCCCCTGGACCAAGCCATTCAGGAGTTCATGAGTCGACCTCTAGA	17	-	59018516-59018565	17qD	Mus musculus RIKEN cDNA 2610034M16 gene (2610034M16Rik), mRNA. XM_925124 XM_980421 XM_980454 XM_980485				AV114557	AV114557
Mus musculus	RefSeq	ILMN_188876	ILMN_259099	2610034M16RIK	NM_027001.1	NM_027001.1		69239	110625716	NM_027001.1	2610034M16Rik	NP_081277.1	ILMN_2456502	005290349	S	3995	GGGATCAAATGAATCTATTCCTTATGTTTTAAAACTTGGAGCAACTCCCT	17	-	59018360-59018409	17qD	Mus musculus RIKEN cDNA 2610034M16 gene (2610034M16Rik), mRNA. XM_925124 XM_980421 XM_980454 XM_980485				AV114557	AV114557
Mus musculus	MEEBO	ILMN_196278	ILMN_196278	SCL0002219.1_6	scl0002219.1_6	AK019477.1			12859707	AK019477.1	scl0002219.1_6		ILMN_1255355	002320523	S	16	AGTAGAACAGAACAAAATGCTGGCTAGGGCTGCTCCCGCCTTTCTGAAGG										
Mus musculus	RefSeq	ILMN_219928	ILMN_219928	MAN1A	NM_008548.4	NM_008548.4		17155	145966700	NM_008548.4	Man1a	NP_032574.1	ILMN_2715319	006020037	S	3382	GGGAGAATTCCATATGACTAGCTCATGGGTATACATTTCCTCTTTGGGTC				10qB3	Mus musculus mannosidase 1, alpha (Man1a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]	PCR1	PCR1
Mus musculus	Riken	ILMN_204847	ILMN_204847	TRRP4AP-PENDING	ri|A130022E05|PX00122O07|AK037501|2028					AK037501	Trrp4ap-pending		ILMN_1227766	006220463	S	1684	CAGAAACCATAGCCGTGTTGTGACTCGGTCTCTCACCATCCACGGGCTCC										
Mus musculus	Riken	ILMN_202965	ILMN_202965	A230020C19RIK	ri|A230020C19|PX00126I16|AK038489|985					AK038489	A230020C19Rik		ILMN_1222182	006020707	S	621	GAAGGACCTAAGCATCCACACTTTGGTTTTCCTTCTTGAGCTGCATGTGG										
Mus musculus	RefSeq	ILMN_216798	ILMN_216798	PKLR	NM_013631.2	NM_013631.2		18770	153792130	NM_013631.2	Pklr	NP_038659.2	ILMN_2675491	007050066	S	26	CCCACACTTTGGAAGCATGTCTGTCCAAGAGAACGAGCTACCCCAGCAGC				3qF1	Mus musculus pyruvate kinase liver and red blood cell (Pklr), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IDA]	Pk-1; Pk1	Pk-1; Pk1
Mus musculus	RefSeq	ILMN_186255	ILMN_240540	GIGYF1	NM_031408.2	NM_031408.2		57330	154091041	NM_031408.2	Gigyf1	NP_113596.2	ILMN_2600453	002710747	S	2906	GCCTGGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACAATTCCTGGAG				5qG2	Mus musculus GRB10 interacting GYF protein 1 (Gigyf1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA4110; KIAA4110; GIGYF1	mKIAA4110; KIAA4110; GIGYF1
Mus musculus	RefSeq	ILMN_186255	ILMN_240540	GIGYF1	NM_031408.2	NM_031408.2		57330	154091041	NM_031408.2	Gigyf1	NP_113596.2	ILMN_2433964	004180703	S	3463	ATCCAAAAGCTAGACGGTAGACCCCTACACCCCTTTGGGAATAATGGGTG				5qG2	Mus musculus GRB10 interacting GYF protein 1 (Gigyf1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA4110; KIAA4110; GIGYF1	mKIAA4110; KIAA4110; GIGYF1
Mus musculus	MEEBO	ILMN_189364	ILMN_189364	SCL0002508.1_73	scl0002508.1_73	AK048961.1			26093234	AK048961.1	scl0002508.1_73		ILMN_2460618	003180202	S	14	TCTGAAGCAGAAAAAGACAAGGAGCTTCATCAGGCAAAAACTCCTGGGAA										
Mus musculus	MEEBO	ILMN_224299	ILMN_224299	OLFR458	scl29078.1.1_230				33238925	NM_146444	Olfr458		ILMN_1232841	004920674	S	773	CACACATGGAGCCCACCTCCACAGCCTCTGTTGAGCAGGACAAGGTGGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_258851	ILMN_258851	V1RE10	NM_134229.1	NM_134229.1		171263	21717774	NM_134229.1	V1re10	NP_598990.1	ILMN_2780589	005900612	S	682	GAATCCAGAGCCACTCAGAAGATCCTAGTCCTGGTGTGTACCTTCCTGGC	7	+	11032841-11032890	7qA1	Mus musculus vomeronasal 1 receptor, E10 (V1re10), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_188969	ILMN_251621	FAM13C	NM_024244.3	NM_024244.3		71721	31343632	NM_024244.3	Fam13c	NP_077206.2	ILMN_2591159	003450367	S	3006	GACTATGTCAGAGGCGTGTTGTTCTCTCTGTATTCACCTGCTGTTTATGA	10	+	70021223-70021272	10qB5.3	Mus musculus family with sequence similarity 13, member C (Fam13c), mRNA.				C030038O19Rik; KIAA1796; mKIAA1796	C030038O19Rik; KIAA1796; mKIAA1796
Mus musculus	RefSeq	ILMN_251621	ILMN_251621	FAM13C	NM_024244.3	NM_024244.3		71721	31343632	NM_024244.3	Fam13c	NP_077206.2	ILMN_2991574	004540474	S	1871	CAGGATGTGGCCCAAACTATTTGAGGTTCAGCTCTGCTCACTTCCCTCTC	10	+	70020088-70020111:70020112-70020137	10qB5.3	Mus musculus family with sequence similarity 13, member C (Fam13c), mRNA.				C030038O19Rik; KIAA1796; mKIAA1796	C030038O19Rik; KIAA1796; mKIAA1796
Mus musculus	RefSeq	ILMN_222060	ILMN_247276	MTAP6	NM_001043355.2	NM_001043355.2		17760	114520593	NM_001043355.2	Mtap6	NP_001036820.2	ILMN_2744006	007610133	S	2014	AATCCCAGTACCTTTGAAGGGTCAGGATCCCCTGGTGCCAGCCCCAACAA	7	+	106485326-106485375	7qE2	Mus musculus microtubule-associated protein 6 (Mtap6), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	STOP; 2810411E12Rik	STOP; 2810411E12Rik
Mus musculus	MEEBO	ILMN_214997	ILMN_214997	5330430C04RIK	scl51579.1.1_134	NM_030077.1			27229260	NM_030077.1	5330430C04Rik		ILMN_1212732	005870711	S	1166	CTGTTTACAAGGGGAGCCTGCAAAAGTACCCCTGACCTCAGAATGGCAGG										
Mus musculus	RefSeq	ILMN_211265	ILMN_235088	KLK12	XM_914283.2	XM_914283.2		69511	94380301	XM_914283.2	Klk12	XP_919376.1	ILMN_2614119	004260521	S	687	CTACACGAAGGTCTGCAAATACACGGACTGGATCAGAATAGTCATCAGGA				7qB4	PREDICTED: Mus musculus kallikrein related-peptidase 12 (Klk12), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	Riken	ILMN_203249	ILMN_203249	SEPT3	ri|5430412N19|PX00102B18|AK030668|1883					AK030668	Sept3		ILMN_2555851	007610519	S	1421	GCTGAGATGATGTGGTGCGTCACCGACTTCACCATACCCAGTAGCTTGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_206539	ILMN_206539	2010005O13RIK	ri|2010005O13|ZX00053D09|AK075812|888					AK075812	2010005O13Rik		ILMN_1247581	006200491	S	406	GCCGTGAAGAAGTGCTTTGCTGTGTGGCTTGCAATTTGGACATTTTTGAG										
Mus musculus	MEEBO	ILMN_209465	ILMN_209465	A730085E03RIK	scl0328983.4_47				46402264	NM_207256	A730085E03Rik		ILMN_1234538	000450241	S	404	GCCAACGCGCCTCCATTCCGGGAGAAGTCTGGGAACGCGGGAAGGTCCTT										
Mus musculus	Riken	ILMN_205576	ILMN_205576	A630076G18RIK	ri|A630076G18|PX00147I02|AK042261|2711					AK042261	A630076G18Rik		ILMN_2573616	006560184	S	2364	GTGCAGGGGACCCTCAGAGGCTCAGTGACCATGGAGTTTATCTGACTTGC										
Mus musculus	RefSeq	ILMN_193084	ILMN_230563	BTRC	NM_009771.2	NM_009771.2		12234	142373205	NM_009771.2	Btrc	NP_033901.1	ILMN_2690741	007560471	S	1788	CATCTCCAGATAAATAACCCAACACTGGCCTCATAATTGCCCAGGATTCG	19	+	45601902-45601915:45601916-45601946:45603463-45603467	19qC3	Mus musculus beta-transducin repeat containing protein (Btrc), transcript variant 2, mRNA.			Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	b-TrCP; KIAA4123; Beta-Trcp1; mSlimb; Slimb; FWD1; mKIAA4123; Fbw1a; beta-TrCP	b-TrCP; KIAA4123; Beta-Trcp1; mSlimb; Slimb; FWD1; mKIAA4123; Fbw1a; beta-TrCP
Mus musculus	Riken	ILMN_206186	ILMN_206186	6430404H03RIK	ri|6430404H03|PX00315E20|AK078182|1972					AK078182	6430404H03Rik		ILMN_1244518	004900253	S	1716	AGACCAGGTTAGACTTGAACTCACAGAGGTGTGCCCCCCCAAGTGCTCTG										
Mus musculus	RefSeq	ILMN_197054	ILMN_197054	LOC381320	XM_355269.1	XM_355269.1			38073689	XM_355269.1	LOC381320		ILMN_1231709	000510253	S	563	CTTCTATCCCTAACGCTCCAGTGGAGGGCCTAAGGAGCAAGTGTGTCTCC										
Mus musculus	RefSeq	ILMN_223458	ILMN_223458	GPRC2A-RS5	NM_029460.2	NM_029460.2		75835	141803327	NM_029460.2	Gprc2a-rs5	NP_083736.1	ILMN_1226518	001780133	S	134	TGTGACTGACTGTGGACACAAGAGAAAATCACCTGCTGTGCTTACAGGAC	7	+	48941687-48941736	7qB3	Mus musculus G protein-coupled receptor, family C, group 2, member A, related sequence 5 (Gprc2a-rs5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	4930562N12Rik; 1700108E19Rik; Casr-rs5	4930562N12Rik; 1700108E19Rik; Casr-rs5
Mus musculus	RefSeq	ILMN_212822	ILMN_212822	ALDH1A2	NM_009022.3	NM_009022.3		19378	144227213	NM_009022.3	Aldh1a2	NP_033048.1	ILMN_2630753	001090661	S	1657	TCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGCAAGCCT	9	+	71143503-71143552	9qD	Mus musculus aldehyde dehydrogenase family 1, subfamily A2 (Aldh1a2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to a single longitudinal plane. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 9855] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IDA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IGI]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [evidence IDA]; Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal [goid 1758] [evidence IDA]	Raldh1; AV116159; Aldh1a7; Raldh2; RALDH-2	Raldh1; AV116159; Aldh1a7; Raldh2; RALDH-2
Mus musculus	RefSeq	ILMN_230666	ILMN_230666	BEX6	NM_001033539.2	NM_001033539.2		328660	114145666	NM_001033539.2	Bex6	NP_001028711.1	ILMN_2962565	000870603	S	649	GGGCAGGAGACAGAAGCCAAGAGAAAGAGTCAGGAGCAGTGGATGAGGTT	16	+	32186696-32186745	16qB2	Mus musculus brain expressed gene 6 (Bex6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			B020003O03Rik	B020003O03Rik
Mus musculus	Riken	ILMN_203804	ILMN_203804	4930506M07RIK	ri|A330001C14|PX00130L23|AK039224|2881					AK039224	4930506M07Rik		ILMN_1225868	004540189	S	2515	GAACATCAGGTGTCCTGCTACATCACCACCCTTACACTGTTGAGACAGCG						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence ISA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_201847	ILMN_201847	5730564E11RIK	ri|5730564E11|PX00006J10|AK017854|1442					AK017854	5730564E11Rik		ILMN_1219945	004390368	S	1106	CTTCCAGATCCCCTGACTGGACAGAGGCGAGACAAGACGTGCGAGTTCTG										
Mus musculus	RefSeq	ILMN_201485	ILMN_201485	LOC385247	XM_358143.1	XM_358143.1			38094386	XM_358143.1	LOC385247		ILMN_2542468	004490370	S	89	TCCCAAGCACACAGCAGATCCCAGTGATGAACTTCGGCCCAGACCGCACT										
Mus musculus	RefSeq	ILMN_196462	ILMN_254780	RAB28	NM_027295.2	NM_027295.2		100972	133892420	NM_027295.2	Rab28	NP_081571.1	ILMN_1238517	002470541	S	211	AACTGAAAATCGTCGTGCTGGGGGACGGCACCTCGGGGAAGACCTCCTTA	5	-	42094764-42094773:42099144-42099183	5qB3	Mus musculus RAB28, member RAS oncogene family (Rab28), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AW496496; 2700023P08Rik; MGC8039	AW496496; 2700023P08Rik; MGC8039
Mus musculus	RefSeq	ILMN_196462	ILMN_254780	RAB28	NM_027295.2	NM_027295.2		100972	133892420	NM_027295.2	Rab28	NP_081571.1	ILMN_2739698	001450463	S	1557	CTCCTTGGATCATTGGGGATCGATCACACTGGACCTGTTGTGCAGATGGT	5	-	42016244-42016293	5qB3	Mus musculus RAB28, member RAS oncogene family (Rab28), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AW496496; 2700023P08Rik; MGC8039	AW496496; 2700023P08Rik; MGC8039
Mus musculus	RefSeq	ILMN_219722	ILMN_219722	STK32B	NM_022416.1	NM_022416.1		64293	33468970	NM_022416.1	Stk32b	NP_071861.1	ILMN_2948212	003120521	S	3228	GTCTTCTTGGCATGAGCTTGTGAATGAGAGGAGGTGGTGAAGGGGAGGTG	5	-	37838136-37838185	5qB3	Mus musculus serine/threonine kinase 32B (Stk32b), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	2510009F08Rik; YANK2; Stk32; STKG6	2510009F08Rik; YANK2; Stk32; STKG6
Mus musculus	RefSeq	ILMN_217750	ILMN_217750	1520401A03RIK	NM_177132.3	NM_177132.3		320309	142359763	NM_177132.3	1520401A03Rik	NP_796106.1	ILMN_1245875	000380561	S	3102	GCCCTGCCCCGGGTCTCCTCTGGGCTGAAGTATTAATAAAAGCCATATGA	17	-	23842028-23842077	17qA3.3	Mus musculus RIKEN cDNA 1520401A03 gene (1520401A03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223397	ILMN_223397	2610208M17RIK	NM_181732.3	NM_181732.3		108909	142352329	NM_181732.3	2610208M17Rik	NP_859421.1	ILMN_1213265	004490091	S	2900	TGATATTGCTGACTAGACATAAAAATTAATTCCTTAAAACCTATTATTAT	1|NT_165754.2	+	297456-297505		Mus musculus RIKEN cDNA 2610208M17 gene (2610208M17Rik), mRNA.				MGC6869; MGC101949; BC004835	MGC6869; MGC101949; BC004835
Mus musculus	RefSeq	ILMN_196939	ILMN_196939	LOC381282	XM_355223.1	XM_355223.1			38050342	XM_355223.1	LOC381282		ILMN_2526326	004810707	S	1124	ACGGCGATCGAAGCATTCACTGGAAGGTACTGCAAAGCTGCGTGTGCACG										
Mus musculus	MEEBO	ILMN_190828	ILMN_190828	RSN	scl26054.30_361				23821024	NM_019765	Rsn		ILMN_2473620	006900091	S	14	GCTTGATGAGTGAGCAGTCAATACATCTGCTGCCCGTCGGCATTCTGGGT										
Mus musculus	RefSeq	ILMN_215406	ILMN_215406	PPP4R1	NM_146081.1	NM_146081.1		70351	22164781	NM_146081.1	Ppp4r1	NP_666193.1	ILMN_1240892	004150056	S	2550	GCTGGTCATGACCTGAAGGAAATTTCTTAGCACGAATATTGTGTCAGGTA	17	+	66190993-66191042	17qE1.1	Mus musculus protein phosphatase 4, regulatory subunit 1 (Ppp4r1), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	3110001J10Rik; Pp4r1; MGC31567	3110001J10Rik; Pp4r1; MGC31567
Mus musculus	RefSeq	ILMN_215406	ILMN_215406	PPP4R1	NM_146081.1	NM_146081.1		70351	22164781	NM_146081.1	Ppp4r1	NP_666193.1	ILMN_2873510	007000079	S	2610	GATCATGGTCAGCTCTGAGGTGCAACTGTGTCTTCCCGTGCTGCACCCCT	17	+	66191053-66191102	17qE1.1	Mus musculus protein phosphatase 4, regulatory subunit 1 (Ppp4r1), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	3110001J10Rik; Pp4r1; MGC31567	3110001J10Rik; Pp4r1; MGC31567
Mus musculus	RefSeq	ILMN_215406	ILMN_215406	PPP4R1	NM_146081.1	NM_146081.1		70351	22164781	NM_146081.1	Ppp4r1	NP_666193.1	ILMN_2659108	001770435	S	1631	GCCTCCCCATGGACCAGTTTGCTGTGCACTTGATGCCACATTTGCTGACC	17	+	66188177-66188226	17qE1.1	Mus musculus protein phosphatase 4, regulatory subunit 1 (Ppp4r1), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	3110001J10Rik; Pp4r1; MGC31567	3110001J10Rik; Pp4r1; MGC31567
Mus musculus	RefSeq	ILMN_220070	ILMN_220070	AW209491	NM_134067.3	NM_134067.3		105351	141801141	NM_134067.3	AW209491	NP_598828.2	ILMN_2717234	001240201	S	2754	AGAACTCTGAAGGTAAACATTAGTTTGAACAAGTAGAAAATGTAGTTTTC	13	+	14731232-14731281	13qA1	Mus musculus expressed sequence AW209491 (AW209491), mRNA.					
Mus musculus	RefSeq	ILMN_198723	ILMN_198723	LOC333825	XM_289922.2	XM_289922.2			38087078	XM_289922.2	LOC333825		ILMN_1254716	004590554	S	1235	GGGACCTTCGGGATGACTTTGAGAAAAAGATGGCTGACTTCCACAAGGAG										
Mus musculus	Riken	ILMN_203178	ILMN_203178	LU	ri|A430106M06|PX00064H09|AK040564|1437					AK040564	Lu		ILMN_1249073	003940367	S	1105	TGAGAGCTTTGGGAGGAGGGAGGATAGGGTGGGGTCAGGTTCCATCCGCT										
Mus musculus	RefSeq	ILMN_209136	ILMN_209136	BHLHB9	NM_198161.1	NM_198161.1		70237	37718978	NM_198161.1	Bhlhb9	NP_937804.1	ILMN_1251595	000460239	S	2052	GTGTCTTGAGGGTTAGTATCTGCTTAGATCTGTTGGTGGCTCCAGAGAGC	X	+	132425492-132425541	XqF1	Mus musculus basic helix-loop-helix domain containing, class B9 (Bhlhb9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2700087I09Rik	2700087I09Rik
Mus musculus	RefSeq	ILMN_217464	ILMN_217464	ATPIF1	NM_007512.2	NM_007512.2		11983	31982863	NM_007512.2	Atpif1	NP_031538.2	ILMN_1250068	003450762	S	432	CAGAGTGGCCCGTATCACTCCCCACGTCTGTAGACACATGGCTTTGAATG	4	-	132086513-132086562	4qD2.3	Mus musculus ATPase inhibitory factor 1 (Atpif1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleotides [goid 45980] [evidence IEA]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]	If1; Atpi	If1; Atpi
Mus musculus	RefSeq	ILMN_217059	ILMN_217059	ANKRD24	NM_027480.2	NM_027480.2		70615	68264923	NM_027480.2	Ankrd24	NP_081756.3	ILMN_1252105	004260452	S	2887	TGAAGGAGGCTCTGAAGGTGCAGCAGTCCACCCCAGCCAGCTCCAAGGAG	10	+	81109081-81109130	10qC1	Mus musculus ankyrin repeat domain 24 (Ankrd24), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D10Bur2e; 5730519E19Rik; 4631433D01Rik	D10Bur2e; 5730519E19Rik; 4631433D01Rik
Mus musculus	RefSeq	ILMN_211857	ILMN_211857	PRPSAP1	XM_181343.5	XM_181343.5		67763	149262514	XM_181343.5	Prpsap1	XP_181343.6	ILMN_2620166	000010431	S	1660	TGCAGAGGCGGACAGACACAGCGGGGTGTCAGCCTGCAAATGGGCTGCAG	11	-	116332642-116332691	11qE2	PREDICTED: Mus musculus phosphoribosyl pyrophosphate synthetase-associated protein 1 (Prpsap1), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]		
Mus musculus	Riken	ILMN_204539	ILMN_204539	B230370O11RIK	ri|B230370O11|PX00161J16|AK046328|1429					AK046328	B230370O11Rik		ILMN_1245574	003400722	S	1211	CTGTGTCAGGACAGTGTGAGCCTCTGTGTGAGTGCTGCGAACTAAGGCCC										
Mus musculus	RefSeq	ILMN_198662	ILMN_253109	LOC236983	XR_003514.1	XR_003514.1		236983	94409266	XR_003514.1	LOC236983		ILMN_1231067	007570286	S	953	GGCTAAAGAATGGGCGTCGCATCACCTACTGGCTAAAGAATGGGTGCCAC				XqE1	PREDICTED: Mus musculus similar to Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) (Liver copper-binding protein) (CUBP) (LOC236983), mRNA.					
Mus musculus	RefSeq	ILMN_214658	ILMN_214658	RAB33A	NM_011228.1	NM_011228.1		19337	6755259	NM_011228.1	Rab33a	NP_035358.1	ILMN_3161828	000240543	S	733	GACTTAAGGCCCAGAAATCCCTCTTGTACCGTGATGCCGAGAGGCAGCAA	X	+	45883169-45883218	XqA4	Mus musculus RAB33A, member of RAS oncogene family (Rab33a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rabs10; MGC129489; MGC129488	Rabs10; MGC129489; MGC129488
Mus musculus	RefSeq	ILMN_210922	ILMN_240447	LCE3F	NM_001018079.1	NM_001018079.1		69520	66267724	NM_001018079.1	Lce3f	NP_001018089.1	ILMN_2610594	001660754	S	509	AGATCCTGTACCTTGATATCTTGAGAGCTTTTGATAACTGCCTGGGTGGT	3	+	92797246-92797295	3qF1	Mus musculus late cornified envelope 3F (Lce3f), mRNA.				2310002A05Rik	2310002A05Rik
Mus musculus	RefSeq	ILMN_215499	ILMN_215499	RBBP7	NM_009031.2	NM_009031.2		245688	31982058	NM_009031.2	Rbbp7	NP_033057.2	ILMN_1219275	002650598	S	105	AACTCAGGCTTTTCCGAGCGAGGACTGCGTGACGTGCCTGGGAGAGGCAA	X	+	159198495-159198544	XqF4	Mus musculus retinoblastoma binding protein 7 (Rbbp7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	mRbAp46; AI173248; AU019541; BB114024; AA409861	mRbAp46; AI173248; AU019541; BB114024; AA409861
Mus musculus	RefSeq	ILMN_215499	ILMN_215499	RBBP7	NM_009031.2	NM_009031.2		245688	31982058	NM_009031.2	Rbbp7	NP_033057.2	ILMN_2691187	000670711	S	83	AGAACCCAGACGGCCAGACCGAACTCAGGCTTTTCCGAGCGAGGACTGCG	X	+	159198473-159198522	XqF4	Mus musculus retinoblastoma binding protein 7 (Rbbp7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	mRbAp46; AI173248; AU019541; BB114024; AA409861	mRbAp46; AI173248; AU019541; BB114024; AA409861
Mus musculus	RefSeq	ILMN_215499	ILMN_215499	RBBP7	NM_009031.2	NM_009031.2		245688	31982058	NM_009031.2	Rbbp7	NP_033057.2	ILMN_2896823	004760131	S	1925	GGGTGGGTGTGCATGCTCCCATCTCTCATAGTATATATAGATTTGTATGA	X	+	159216762-159216811	XqF4	Mus musculus retinoblastoma binding protein 7 (Rbbp7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	mRbAp46; AI173248; AU019541; BB114024; AA409861	mRbAp46; AI173248; AU019541; BB114024; AA409861
Mus musculus	RefSeq	ILMN_189852	ILMN_215499	RBBP7	NM_009031.2	NM_009031.2		245688	31982058	NM_009031.2	Rbbp7	NP_033057.2	ILMN_2699423	004780685	S	2091	TAGAGATTTTTCACTACCGTAAATCTGATTTTATCTACTCAATTCTGTAG	X	+	159216928-159216977	XqF4	Mus musculus retinoblastoma binding protein 7 (Rbbp7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	mRbAp46; AI173248; AU019541; BB114024; AA409861	mRbAp46; AI173248; AU019541; BB114024; AA409861
Mus musculus	RefSeq	ILMN_215499	ILMN_215499	RBBP7	NM_009031.2	NM_009031.2		245688	31982058	NM_009031.2	Rbbp7	NP_033057.2	ILMN_2691192	006590445	S	91	AGACGGCCAGACCGAACTCAGGCTTTTCCGAGCGAGGACTGCGTGACGTG	X	+	159198481-159198530	XqF4	Mus musculus retinoblastoma binding protein 7 (Rbbp7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	mRbAp46; AI173248; AU019541; BB114024; AA409861	mRbAp46; AI173248; AU019541; BB114024; AA409861
Mus musculus	RefSeq	ILMN_200802	ILMN_200802	LOC384580	XM_357725.1	XM_357725.1			38086250	XM_357725.1	LOC384580		ILMN_1245836	004070021	S	251	ATCTCTTCTTTGCTGGACCCGAGACTACCAGCACCACCCTCCGATCTGGC										
Mus musculus	RefSeq	ILMN_197715	ILMN_197715	LOC239516	XM_139419.2	XM_139419.2			38077552	XM_139419.2	LOC239516		ILMN_2529115	001510379	S	145	CCTCAGGCTTCCATGAAGGGACAGAACCCTCCTGACACCTTTAGTGAGGT										
Mus musculus	MEEBO	ILMN_221495	ILMN_221495	NFIA	scl25259.1.303_25	NM_177176.2			31342988	NM_177176.2	Nfia		ILMN_2736379	000130544	S	1983	AGACCATTGTCTCCCCGCTGAACTCGGCTGCCTTGCCACCGAGGTGCCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_188385	ILMN_253944	TRAM1L1	NM_146140.3	NM_146140.3		229801	113865999	NM_146140.3	Tram1l1	NP_666252.1	ILMN_2484215	000380379	S	1861	CCTTTAATAAATATCATGGGTTACTGAAGAGGTGAACAACTTCTTCCTGT	3	+	124025815-124025864	3qG1	Mus musculus translocation associated membrane protein 1-like 1 (Tram1l1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		MGC38777; A830091N21Rik	MGC38777; A830091N21Rik
Mus musculus	RefSeq	ILMN_215665	ILMN_215665	AMDHD1	XM_125854.4	XM_125854.4		71761	94388541	XM_125854.4	Amdhd1	XP_125854.1	ILMN_1232159	007550026	S	1992	GGGGGGCAGAGATGGCCTCCCATTTTTAACATCGTATCAGCCCTTGTAAT	10	-	92986462-92986511	10qC2	PREDICTED: Mus musculus amidohydrolase domain containing 1 (Amdhd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6547] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including glutamate and formamide [goid 19556] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide [goid 16812] [evidence IEA]; Catalysis of the reaction: (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate + H2O = H+ + N-formimidoyl-L-glutamate [goid 50480] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185218	ILMN_185218	TXNDC5	NM_145367.3	NM_145367.3		105245	83921611	NM_145367.3	Txndc5	NP_663342.3	ILMN_1250947	001990564	S	2426	GGAGCAGAGGCGCCCCGCCAGCCTGTTATGAACGTTTATTATTAATCACG	13	-	38592285-38592334	13qA3.3	Mus musculus thioredoxin domain containing 5 (Txndc5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IDA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	ERp46; PC-TRP; AL022641	ERp46; PC-TRP; AL022641
Mus musculus	RefSeq	ILMN_221948	ILMN_221948	MRPS2	NM_080452.2	NM_080452.2		118451	31543264	NM_080452.2	Mrps2	NP_536700.2	ILMN_1233225	000730327	S	1658	GACTCCCCAAAGAAGGAAATCCATACCTGTTTCCCACCCAGAGGACTGGG	2	+	28326276-28326325	2qA3	Mus musculus mitochondrial ribosomal protein S2 (Mrps2), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218304	ILMN_228795	TGFBRAP1	NM_001013025.2	NM_001013025.2		73122	68299761	NM_001013025.2	Tgfbrap1	NP_001013043.1	ILMN_1214561	006620494	S	5448	CTCCTAGCTTCCTTTGCCTCTTAACGAGTCCCAAATCCACAAGATGTACA	1	-	43104154-43104203	1qB	Mus musculus transforming growth factor, beta receptor associated protein 1 (Tgfbrap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			AU024090; Trap1; AU042859; AW742551; 3110018K12Rik	AU024090; Trap1; AU042859; AW742551; 3110018K12Rik
Mus musculus	RefSeq	ILMN_242897	ILMN_242897	1700027N10RIK	NM_029338.1	NM_029338.1		75564	21312973	NM_029338.1	1700027N10Rik	NP_083614.1	ILMN_2935237	006590242	S	710	TGACATCCCCAGAGGGTCTTGGAGCATCCAGATGGAAAGGGGCAACGCAC	17	-	45593040-45593079:45598554-45598563	17qC	Mus musculus RIKEN cDNA 1700027N10 gene (1700027N10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200745	ILMN_200745	LOC384533	XM_357696.1	XM_357696.1			38085741	XM_357696.1	LOC384533		ILMN_1223870	002510338	S	1674	AGACTGCGGGTGGAGCCCTGCCCCAGGTTGTTGGATCAAAGAGGAGAGTG										
Mus musculus	RefSeq	ILMN_213841	ILMN_213841	2810055F11RIK	NM_026038.2	NM_026038.2		67217	141803478	NM_026038.2	2810055F11Rik	NP_080314.1	ILMN_1230505	000520332	S	1278	TGTGTTTTCTCTGTATTATGTGCAAACCAGTATCCAGTTACACTTACAGG	12	-	73174792-73174841	12qC3	Mus musculus RIKEN cDNA 2810055F11 gene (2810055F11Rik), mRNA.			Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: L-proline = D-proline [goid 18112] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201408	ILMN_201408	LOC385114	XM_358063.1	XM_358063.1			38093558	XM_358063.1	LOC385114		ILMN_1214208	000670066	S	1058	GTGGGAAAGCCTTTGCACAACTCAGTAGTTTCCAACGTCATAAAAGAACA										
Mus musculus	RefSeq	ILMN_187591	ILMN_237960	TOR1B	NM_133673.3	NM_133673.3		30934	85861255	NM_133673.3	Tor1b	NP_598434.2	ILMN_1240146	001450731	S	2120	GAGGCTTATTCTCAGGTTTTTAACGTTGCTGGATATGGGGCACAATACCC	2	+	30813658-30813707	2qB	Mus musculus torsin family 1, member B (Tor1b), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	DQ1; 2610016F05Rik; torsinB	DQ1; 2610016F05Rik; torsinB
Mus musculus	RefSeq	ILMN_216810	ILMN_216810	METT5D1	NM_029790.3	NM_029790.3		76894	146149088	NM_029790.3	Mett5d1	NP_084066.2	ILMN_1227616	003890601	S	1662	CCATATTTCATACAGTGGAAAGGAAGCATGTAGAACTGCTCTAACAACCC				2qE3	Mus musculus methyltransferase 5 domain containing 1 (Mett5d1), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AW049952; MGC118452; AI303697; 0610027B03Rik	AW049952; MGC118452; AI303697; 0610027B03Rik
Mus musculus	RefSeq	ILMN_191862	ILMN_261553	PLXNA2	NM_008882.2	NM_008882.2		18845	113722112	NM_008882.2	Plxna2	NP_032908.2	ILMN_2701815	001980427	S	6596	GGCTTGAGCCAGATGGTTCTGCCTCTGTGACTGCTGCTTTGCATGAAAAT	1	+	196638623-196638672	1qH6	Mus musculus plexin A2 (Plxna2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The early migration of granule cell precursors in which cells move orthogonal to the direction of radial migration and ultimately cover the superficial zone of the cerebellar primordium [goid 21935] [evidence IMP]; Any process by which a centrosome is transported to, and/or maintained in, a specific location within the cell [goid 51642] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]	 [goid 17154] [evidence IPI];  [goid 17154] [evidence IGI]	2810428A13Rik; mKIAA0463; AA589422; OCT; Plxn2; AW457381	2810428A13Rik; mKIAA0463; AA589422; OCT; Plxn2; AW457381
Mus musculus	RefSeq	ILMN_191862	ILMN_261553	PLXNA2	NM_008882.2	NM_008882.2		18845	113722112	NM_008882.2	Plxna2	NP_032908.2	ILMN_2482866	000670017	S	10923	TATATTATCATGTACCTATTGTAAATATGAAACTCCTATTTTGCAAGCCA	1	+	196642950-196642999	1qH6	Mus musculus plexin A2 (Plxna2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The early migration of granule cell precursors in which cells move orthogonal to the direction of radial migration and ultimately cover the superficial zone of the cerebellar primordium [goid 21935] [evidence IMP]; Any process by which a centrosome is transported to, and/or maintained in, a specific location within the cell [goid 51642] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]	 [goid 17154] [evidence IPI];  [goid 17154] [evidence IGI]	2810428A13Rik; mKIAA0463; AA589422; OCT; Plxn2; AW457381	2810428A13Rik; mKIAA0463; AA589422; OCT; Plxn2; AW457381
Mus musculus	MEEBO	ILMN_191896	ILMN_191896	ZFP612	scl33328.5_115				31559870	NM_175480	Zfp612		ILMN_1216896	002100167	S	18	ACTTGGAGGAAAACCATTAGAGGGAAATGATTGTGGCAGTCTTCATTTGG								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193793	ILMN_193793	IGKV9-120_V00804$J00566_IG_KAPPA_VARIABLE_9-120_12	IGKV9-120_V00804$J00566_Ig_kappa_variable_9-120_12						IGKV9-120_V00804$J00566_Ig_kappa_variable_9-120_12		ILMN_1245042	002680367	S	1	GCTCCTGCACAGATTTTTGGCTTCTTGTTGCTCTTGTTTCAAGGTACCAG										
Mus musculus	MEEBO	ILMN_223321	ILMN_223321	D030051J21RIK	scl46625.1.1_152	XM_283186.1			28477139	XM_283186.1	D030051J21Rik		ILMN_2762474	005900528	S	2853	TGTAAAAGAGTTATATGCTTGGCTTGTGATATTTAAAGCAAAATGATCAC										
Mus musculus	MEEBO	ILMN_189432	ILMN_189432	2810449M09RIK	scl0078397.1_35						2810449M09Rik		ILMN_2461209	003780672	S	5	TCCCGACATTAGTGTTAGGGGCTCGGAGACACAGCGCGCGGCCATAGACA										
Mus musculus	Riken	ILMN_204978	ILMN_204978	B830020B14RIK	ri|B830020B14|PX00073M19|AK046833|4366					AK046833	B830020B14Rik		ILMN_1214935	001440521	S	4013	CTATGGGTGACTCAGACATTCCTACTGTTCTTTTAGGAACCCCTGTTGGC										
Mus musculus	RefSeq	ILMN_222521	ILMN_222521	2610027L16RIK	NM_026403.2	NM_026403.2		67842	31980977	NM_026403.2	2610027L16Rik	NP_080679.2	ILMN_2750842	004810524	S	1902	AGGCTTGGGAACAACAGCAAAGTACTGTGGCCAAGCGGAGGCGGGCATTG	14	+	56372565-56372614	14qC3	Mus musculus RIKEN cDNA 2610027L16 gene (2610027L16Rik), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184598	ILMN_184598	1500005C15RIK	scl21534.1.1_119						1500005C15Rik		ILMN_2419964	004070008	S	3	GGGGCTCCTGGTTACTTATATTTCCTTGATTCTCCACAGCAAGCATCTCT										
Mus musculus	MEEBO	ILMN_188531	ILMN_188531	RFX4	scl38612.22.1_93				41322905	NM_027689	Rfx4		ILMN_2745712	003850598	S	1310	TAGGACCCTAGGTTGCCACTGTTGCTCGGGCCCTCTTCAAGCCCTGAGAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IMP]; The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input [goid 21516] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209386	ILMN_253782	AHNAK	NM_001039959.1	NM_001039959.1		66395	90403606	NM_001039959.1	Ahnak	NP_001035048.1	ILMN_1258578	000380102	S	970	CTAGGGTGGGCTTTGGCAGCTGTGGGTATAGGCGACTCTCTTCTTACCTA	19	+	9151333-9151382	19qA	Mus musculus AHNAK nucleoprotein (desmoyokin) (Ahnak), transcript variant 3, mRNA.	A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence ISS]			2310047C17Rik; AA589382; AV091586; DY6; 1110004P15Rik	2310047C17Rik; AA589382; AV091586; DY6; 1110004P15Rik
Mus musculus	Riken	ILMN_201834	ILMN_201834	5730419A02RIK	ri|5730419A02|PX00003C22|AK017573|1353					AK017573	5730419A02Rik		ILMN_1245681	005090338	S	540	GCCAGGAGGGACTGTGGGCTTCTCCAACTGCTCTTTCAACTGGCATTCTC										
Mus musculus	RefSeq	ILMN_187857	ILMN_230837	KRR1	NM_178610.3	NM_178610.3		52705	142370709	NM_178610.3	Krr1	NP_848725.1	ILMN_1258846	000730594	S	551	ACGTCATGGTTCAGGGGAACACGGTCTCAGCCATCGGACCTTTCAGTGGC	10	+	111414396-111414445	10qD2	Mus musculus KRR1, small subunit (SSU) processome component, homolog (yeast) (Krr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AI255219; 2610511F02Rik; D10Ertd773e; AI428520; Hrb2	AI255219; 2610511F02Rik; D10Ertd773e; AI428520; Hrb2
Mus musculus	RefSeq	ILMN_187857	ILMN_230837	KRR1	NM_178610.3	NM_178610.3		52705	142370709	NM_178610.3	Krr1	NP_848725.1	ILMN_1218250	005490484	S	3163	GTTAGTACAGGGGCCAATGAGTGTCACGTGAATCCTGTGTTTATGAACTT	10	+	111423748-111423797	10qD2	Mus musculus KRR1, small subunit (SSU) processome component, homolog (yeast) (Krr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AI255219; 2610511F02Rik; D10Ertd773e; AI428520; Hrb2	AI255219; 2610511F02Rik; D10Ertd773e; AI428520; Hrb2
Mus musculus	MEEBO	ILMN_210443	ILMN_210443	GSN	scl0003390.1_0				38014368	BC060377	Gsn		ILMN_2605645	005670132	S	76	CTCTTCCAGTGCTTCAGCCGCTGTCATAGCATCTCCTCTCGGAGTGGCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186714	ILMN_227232	FOXL1	NM_008024.2	NM_008024.2		14241	120952617	NM_008024.2	Foxl1	NP_032050.2	ILMN_2770882	002750040	S	1044	TCGACAGCATCTTGGCCGTGAGACCGACGCCAGCCTCAGGGGCCGAAGCA	8	+	123652628-123652677	8qE1	Mus musculus forkhead box L1 (Foxl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IMP]; The chemical reactions and pathways resulting in the formation of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 30166] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; The process of cell-cell signaling between visceral mesoderm cells and endoderm cells that is involved in the differentiation of cells in the midgut [goid 7495] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FREAC7; Fkh6; fkh-6	FREAC7; Fkh6; fkh-6
Mus musculus	RefSeq	ILMN_209420	ILMN_209420	GABRA3	NM_008067.3	NM_008067.3		14396	142382325	NM_008067.3	Gabra3	NP_032093.2	ILMN_2595601	006770184	S	2228	GTTTCTTGCCTTGGAGGTCAGTGGGGGACAATTGATGCTTACCTCTGTCA	X	-	69679404-69679453	XqA7.3	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 3 (Gabra3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]	Gabra-3	Gabra-3
Mus musculus	RefSeq	ILMN_208909	ILMN_208909	PFKM	NM_021514.3	NM_021514.3		18642	142367127	NM_021514.3	Pfkm	NP_067489.2	ILMN_1252214	004540593	S	405	CCTCACTGGGGCTGACACTTTCCGTTCAGAGTGGAGCGACTTGCTGAATG	15	+	97951347-97951396	15qF1	Mus musculus phosphofructokinase, muscle (Pfkm), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a fructose substrate molecule [goid 8443] [evidence IDA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IMP]	AI131669; Pfka; PFK-M	AI131669; Pfka; PFK-M
Mus musculus	RefSeq	ILMN_208909	ILMN_208909	PFKM	NM_021514.3	NM_021514.3		18642	142367127	NM_021514.3	Pfkm	NP_067489.2	ILMN_2628892	006250672	S	2602	GGTCACACAGGCTGGGTCTCTCTAGTGCTACGGCTAGATTTCAGCTACTC	15	+	97962707-97962756	15qF1	Mus musculus phosphofructokinase, muscle (Pfkm), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a fructose substrate molecule [goid 8443] [evidence IDA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IMP]	AI131669; Pfka; PFK-M	AI131669; Pfka; PFK-M
Mus musculus	RefSeq	ILMN_186069	ILMN_320160	LOC100043544	XM_001480884.1	XM_001480884.1		100043544	149262003	XM_001480884.1	LOC100043544	XP_001480934.1	ILMN_2432354	000870538	S	1903	TAACTTCTGGTCTTTTTTCATTTTCCTCAATTCTCAAAAGTTCCATTTTT	11	+	78109725-78109774	11qB5	PREDICTED: Mus musculus hypothetical protein LOC100043544, transcript variant 2 (LOC100043544), mRNA.					
Mus musculus	RefSeq	ILMN_215951	ILMN_215951	CHST3	NM_016803.2	NM_016803.2		53374	34328238	NM_016803.2	Chst3	NP_058083.1	ILMN_2864172	002810315	S	5585	GGTGCAGCTACACAGCCACAACCTCTTTCTGTCATTGACCTTCTTGGTCT	10	-	59644632-59644681	10qB4	Mus musculus carbohydrate (chondroitin 6/keratan) sulfotransferase 3 (Chst3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 2'-O-sulfate. Results in sulfation of glucuronic acid and iduronic acid residues [goid 34482] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 6'-sulfate [goid 8459] [evidence IEA]	C6ST; GST-0	C6ST; GST-0
Mus musculus	RefSeq	ILMN_215951	ILMN_215951	CHST3	NM_016803.2	NM_016803.2		53374	34328238	NM_016803.2	Chst3	NP_058083.1	ILMN_2864170	004050437	S	5657	CCAATGCCCGATTCTGCTGTTCTCATCTGAGAGCTGACAACCCAGCGCTC	10	-	59644560-59644609	10qB4	Mus musculus carbohydrate (chondroitin 6/keratan) sulfotransferase 3 (Chst3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 2'-O-sulfate. Results in sulfation of glucuronic acid and iduronic acid residues [goid 34482] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 6'-sulfate [goid 8459] [evidence IEA]	C6ST; GST-0	C6ST; GST-0
Mus musculus	RefSeq	ILMN_223661	ILMN_223661	IFNE1	NM_177348.2	NM_177348.2		230405	31340824	NM_177348.2	Ifne1	NP_796322.1	ILMN_1255754	004760692	S	391	TGGACTGAACGCAGCGCAGAAGAGTGGGGGCTCGAGTGCGCAGAACCTTA	4	-	88525665-88525714	4qC4	Mus musculus interferon epsilon 1 (Ifne1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	RP23-400P11.1; Ifnt1; MGC129462; Infe1; Ifn-tau-1; MGC129463	RP23-400P11.1; Ifnt1; MGC129462; Infe1; Ifn-tau-1; MGC129463
Mus musculus	RefSeq	ILMN_198354	ILMN_198354	LOC330322	XM_287582.1	XM_287582.1			28524363	XM_287582.1	LOC330322		ILMN_1234656	002360220	S	285	GTCCTACATGCTGTATGCGCTCTCAAAGAAGCCTGTGCCTACTGGACGGC										
Mus musculus	Riken	ILMN_201950	ILMN_201950	4930511N13RIK	ri|4930511N13|PX00033B20|AK015764|1276					AK015764	4930511N13Rik		ILMN_2545878	001190128	S	883	CTGTTGCCGAAGTTTGGAATCTCCATCTGCAAGGTCTGCGCCATGGCAGC										
Mus musculus	RefSeq	ILMN_209022	ILMN_209022	TRDMT1	NM_010067.2	NM_010067.2		13434	31560600	NM_010067.2	Trdmt1	NP_034197.2	ILMN_2806258	000630047	S	2469	GGTATGTGGAACACACCCCAGGGTAGGCTTATACTCAAGAGTATTTGAGG	2	-	13428132-13428181	2qA1	Mus musculus tRNA aspartic acid methyltransferase 1 (Trdmt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine [goid 16428] [evidence IEA]	Rnmt2; Dnmt2	Rnmt2; Dnmt2
Mus musculus	RefSeq	ILMN_213579	ILMN_213579	RANBP3L	NM_198024.1	NM_198024.1		223332	37574123	NM_198024.1	Ranbp3l	NP_932141.1	ILMN_2734815	002630132	S	3011	CAGAAGAAGAGAGAAAGACTTGCCATCAGGAAAAGGAGTAAACGCAGATG	15	+	8997040-8997084	15qA1	Mus musculus RAN binding protein 3-like (Ranbp3l), mRNA.		The directed movement of substances within a cell [goid 46907] [evidence IEA]		C130037N17Rik	C130037N17Rik
Mus musculus	RefSeq	ILMN_213579	ILMN_213579	RANBP3L	NM_198024.1	NM_198024.1		223332	37574123	NM_198024.1	Ranbp3l	NP_932141.1	ILMN_1256423	004610131	S	3233	GCAGAGAACAGAGGTCTTCTCTATCCCTTGGCATGTTTCTTCTTGGTCCC				15qA1	Mus musculus RAN binding protein 3-like (Ranbp3l), mRNA.		The directed movement of substances within a cell [goid 46907] [evidence IEA]		C130037N17Rik	C130037N17Rik
Mus musculus	Riken	ILMN_206108	ILMN_206108	FMR1	ri|B430202I01|PX00071A05|AK080898|1337					AK080898	Fmr1		ILMN_1255527	005720706	S	1117	CCTCCTCCTACAGCGGGAGGCAGATCTGTCAGCAGGCAGCTTTTACATCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221598	ILMN_221598	CRHBP	NM_198408.2	NM_198408.2		12919	142352317	NM_198408.2	Crhbp	NP_940800.1	ILMN_1231710	002970026	S	1244	CAACAGGTTGTTGGTGGACATGCTTGGTGCTTTTGGTATGCTGCAAACAC	13	-	96201659-96201708	13qD1	Mus musculus corticotropin releasing hormone binding protein (Crhbp), mRNA.		The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IDA]	Interacting selectively with adrenocorticotropin-releasing hormone [goid 17047] [evidence IDA]	CRH-BP	CRH-BP
Mus musculus	RefSeq	ILMN_201058	ILMN_201058	LOC384739	XM_357833.1	XM_357833.1			38088373	XM_357833.1	LOC384739		ILMN_2540934	002000091	S	713	TCATCACCATGTGTTTCTCAGTCAGCCTCAGTGCCACAGTGGCCCTGGGT										
Mus musculus	RefSeq	ILMN_216518	ILMN_216518	LOC386392	XM_359200.1	XM_359200.1		386392	38081497	XM_359200.1	LOC386392	XP_359200.1	ILMN_2672044	002120369	S	348	ATTTCCAGCTCCTGCCAACCAGTGGGAGGCATCTCTACCACCTGCCAACC					PREDICTED: Mus musculus similar to keratin associated protein (LOC386392), mRNA.					
Mus musculus	Riken	ILMN_206946	ILMN_206946	D630021C08RIK	ri|D630021C08|PX00197I11|AK085394|2983					AK085394	D630021C08Rik		ILMN_2583882	003870482	S	2891	GTACCATCAGCACATGACTAATACCAGACCCAAAGCAGGGGAATCAGCAC										
Mus musculus	RefSeq	ILMN_210929	ILMN_210929	CLDN12	NM_022890.1	NM_022890.1		64945	29789137	NM_022890.1	Cldn12	NP_075028.1	ILMN_1242248	006040088	S	3392	GCCTTCTAAGGAGCCAGTTAGGCAAAGAACCTTGAATGTGAGACGGTGCA	5	-	5505264-5505313	5qA1	Mus musculus claudin 12 (Cldn12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220140	ILMN_220140	APPL2	NM_145220.2	NM_145220.2		216190	141803546	NM_145220.2	Appl2	NP_660255.1	ILMN_1219978	005130138	S	2794	CCTTGATGTTTCTGGTTCGTGGGGTCCTGGACCAATCTCCAACCCCTAAT	10	-	83062880-83062929	10qC1	Mus musculus adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2 (Appl2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISO]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence ISO]	Dip3b	Dip3b
Mus musculus	RefSeq	ILMN_222134	ILMN_226888	TBX1	NM_011532.1	NM_011532.1		21380	22094108	NM_011532.1	Tbx1	NP_035662.1	ILMN_1252399	002900239	S	1601	AAGGAAGTGGTATTTATTGTTCTCCGCGAGACCTCGTCGCCTCCGGCCCG	16	-	19218758-19218807	16qA3	Mus musculus T-box 1 (Tbx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of the outer ear are generated and organized. Morphogenesis pertains to the creation of form. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull [goid 42473] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence ISS]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The biological process whose specific outcome is the progression of the soft palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The soft palate is the posterior portion of the palate extending from the posterior edge of the hard palate [goid 60023] [evidence ISS]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence ISS]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process by which the anatomical structures of the ear are generated and organized. Morphogenesis pertains to the creation of form. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 42471] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISS]		
Mus musculus	RefSeq	ILMN_216447	ILMN_318857	LOC100048733	XM_001481081.1	XM_001481081.1		100048733	149275149	XM_001481081.1	LOC100048733	XP_001481131.1	ILMN_2759344	000010239	S	366	CGAGCGAAGGAGAGCTCTCAGGGACAGATACTAAACTCTCAGAGACTGGG					PREDICTED: Mus musculus similar to WAP four-disulfide core domain 2 (LOC100048733), mRNA.					
Mus musculus	MEEBO	ILMN_184661	ILMN_184661	TNFSF13B	scl34089.7_43				15826857	NM_033622	Tnfsf13b		ILMN_1226099	000610661	S	5	CTCCAGTCCTTTGCCAACACGCACCGCAACCTTGCTTTTTGCCTTGGGTG						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that activates or increases the frequency, rate, or extent of germinal center formation [goid 2636] [evidence IMP]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence IGI]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the B cell receptor to augment B cell activation [goid 31296] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198835	ILMN_198835	LOC232867	XM_145358.1	XM_145358.1			20819491	XM_145358.1	LOC232867		ILMN_1235492	004900750	S	1142	CCACCTTTGAGGGTTACCAAGAGAGACTCCAGAGAGATCCCAAACCGTAC										
Mus musculus	RefSeq	ILMN_248909	ILMN_248909	HYAL4	NM_029848.1	NM_029848.1		77042	116812878	NM_029848.1	Hyal4	NP_084124.1	ILMN_2782392	003990458	S	2037	GACCCAGTCAACTAATTCATCAGAGAAGGTGAAATGCAGGGCTACTGTGC	6	+	24716468-24716517	6qA3.1	Mus musculus hyaluronoglucosaminidase 4 (Hyal4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4632428M18Rik	4632428M18Rik
Mus musculus	RefSeq	ILMN_198799	ILMN_198799	LOC244115	XM_145899.3	XM_145899.3			38087725	XM_145899.3	LOC244115		ILMN_1235521	006220491	S	1400	TCCAGATGCCAGTTAGTTTCCAGGGATACATGGGCTCTGTTGCAGCATTC										
Mus musculus	RefSeq	ILMN_213775	ILMN_213775	RB1CC1	NM_009826.3	NM_009826.3		12421	31982810	NM_009826.3	Rb1cc1	NP_033956.1	ILMN_1258458	007200612	S	6147	GCGTGATTTCTGGGAAAGGTGAAAAAAATGTTCTGTATCAAAGAGAAACC	1	+	6265286-6265335	1qA1	Mus musculus RB1-inducible coiled-coil 1 (Rb1cc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; Any process that increases cell size [goid 45793] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FIP200; LaXp180; DRAGOU14; 2900055E04Rik; Cc1; 5930404L04Rik	FIP200; LaXp180; DRAGOU14; 2900055E04Rik; Cc1; 5930404L04Rik
Mus musculus	RefSeq	ILMN_213775	ILMN_213775	RB1CC1	NM_009826.3	NM_009826.3		12421	31982810	NM_009826.3	Rb1cc1	NP_033956.1	ILMN_2640642	000010477	S	6451	TGGAATAAACATAGTGTATAGAATACCTAATTCAAAAACATATTAATGAA	1	+	6265590-6265639	1qA1	Mus musculus RB1-inducible coiled-coil 1 (Rb1cc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; Any process that increases cell size [goid 45793] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FIP200; LaXp180; DRAGOU14; 2900055E04Rik; Cc1; 5930404L04Rik	FIP200; LaXp180; DRAGOU14; 2900055E04Rik; Cc1; 5930404L04Rik
Mus musculus	Riken	ILMN_205820	ILMN_205820	2310047C21RIK	ri|A430066J11|PX00137J07|AK040124|3652					AK040124	2310047C21Rik		ILMN_1225109	007100091	S	3346	CAGGCCAGCTTAGTCTACATAGTGAGCTCCACATCAGCCAGGCCATGCAG										
Mus musculus	RefSeq	ILMN_212677	ILMN_212677	ASAH3L	NM_139306.1	NM_139306.1		230379	21314857	NM_139306.1	Asah3l	NP_647467.1	ILMN_2629112	001470386	S	4000	GGCGGTATGTACCCTGGCTGAAGTAATATTAACCATAGCTCTGGGAGGAT	4	+	86566631-86566680	4qC4	Mus musculus N-acylsphingosine amidohydrolase 3-like (Asah3l), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine [goid 17040] [evidence IEA]	CRG-L1; maCER2; RP24-468M3.3; 2410116I05Rik; Acer2	CRG-L1; maCER2; RP24-468M3.3; 2410116I05Rik; Acer2
Mus musculus	Riken	ILMN_202008	ILMN_202008	2600005J22RIK	ri|2600005J22|ZX00044L05|AK011159|729					AK011159	2600005J22Rik		ILMN_1246515	001340497	S	332	AGTCAAAACCACAATGGGTCACCAGTTACAGACCCCCCAGGCTAGGTGCA										
Mus musculus	RefSeq	ILMN_195506	ILMN_254812	SLC8A3	NM_080440.2	NM_080440.2		110893	142363097	NM_080440.2	Slc8a3	NP_536688.1	ILMN_2750193	001990187	S	2433	ACAAGAATTACGTCATTGAGATGATGGGCCCCCGCATGGTGGATATGAGT	12	-	82317717-82317766	12qD1	Mus musculus solute carrier family 8 (sodium/calcium exchanger), member 3 (Slc8a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + cation(out) = Ca2+(out) + cation(in) [goid 15368] [evidence IDA]	MGC90626; AW742262; Ncx3	MGC90626; AW742262; Ncx3
Mus musculus	RefSeq	ILMN_220058	ILMN_220058	HOXA11	NM_010450.2	NM_010450.2		15396	118129999	NM_010450.2	Hoxa11	NP_034580.1	ILMN_2717079	002760411	S	2164	CGCTCACTGCTAAAATATTTGAATGTATGCTTCATACAGGGATGGTGTTC	6	-	52192135-52192184	6qB3	Mus musculus homeo box A11 (Hoxa11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; Branching of the ureteric bud [goid 1658] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hox-1.9; Hoxa-11	Hox-1.9; Hoxa-11
Mus musculus	MEEBO	ILMN_215596	ILMN_215596	2310043D08RIK	scl20431.14.1_58	XM_130428.2			38075614	XM_130428.2	2310043D08Rik		ILMN_1246709	000780731	S	6174	TACCAAGATCTACTTAAGGACTGAAAGTTTTCCCGTAAGACCCACAGATC										
Mus musculus	Riken	ILMN_206775	ILMN_206775	4933437K13RIK	ri|E030006M07|PX00204G24|AK086865|1516					AK086865	4933437K13Rik		ILMN_1230045	003370037	S	1190	GTGTCTAAGCTCTGTTCACATGACTGCTTTAGGGTTTAGCTCTGCAGGCC										
Mus musculus	MEEBO	ILMN_223945	ILMN_223945	A930025J12RIK	scl18785.23_2				31343465	NM_173734	A930025J12Rik		ILMN_1223159	002450026	S	2725	GGCTTGGAGACGGCCTATAACATCACCAGGGATGGGTTCACTTGAAGCAC										
Mus musculus	RefSeq	ILMN_192839	ILMN_233339	SNX21	NM_133924.3	NM_133924.3		101113	141801786	NM_133924.3	Snx21	NP_598685.2	ILMN_2491804	004810711	S	1139	TTCCTCCTGTCTTAAGGCCATGCCTAGGAGACAGGCTGGCCCAGGTTAGG	2	+	164617889-164617938	2qH3	Mus musculus sorting nexin family member 21 (Snx21), mRNA.				5730407K14Rik; RP23-370H21.7; AI481716	5730407K14Rik; RP23-370H21.7; AI481716
Mus musculus	Riken	ILMN_207354	ILMN_207354	9830166F08RIK	ri|9830166F08|PX00655O22|AK079423|4482					AK079423	9830166F08Rik		ILMN_2586977	004570075	S	4404	AAGTGAGCAGAGCCACCAATCTCTGGCACCAAGTCCCTGACCACTACCCC										
Mus musculus	RefSeq	ILMN_215471	ILMN_215471	LRBA	NM_030695.2	NM_030695.2		80877	117956398	NM_030695.2	Lrba	NP_109620.2	ILMN_2659960	004810132	S	9664	CAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGT	3	+	86586397-86586446	3qF1	Mus musculus LPS-responsive beige-like anchor (Lrba), transcript variant 1, mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence TAS]	Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISA]	Lab300; C80285; D3Ertd775e; Lba	Lab300; C80285; D3Ertd775e; Lba
Mus musculus	RefSeq	ILMN_192064	ILMN_246900	SLC9A6	NM_172780.2	NM_172780.2		236794	141802040	NM_172780.2	Slc9a6	NP_766368.1	ILMN_1228122	002120224	S	2181	CCTACAAGTCCTAGTGCATGTCTCTGAATGTGTAAGCTATATAAATGCCG	X	+	53914691-53914740	XqA5	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 6 (Slc9a6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]	3732426M05; 6430520C02Rik; mKIAA0267	3732426M05; 6430520C02Rik; mKIAA0267
Mus musculus	RefSeq	ILMN_192064	ILMN_246900	SLC9A6	NM_172780.2	NM_172780.2		236794	141802040	NM_172780.2	Slc9a6	NP_766368.1	ILMN_2617844	002360630	S	342	GGTAGGCCTCGTGCTTCGGTACGGCATTCATGTTCCAAGCGATGTGAATA	X	+	53873510-53873559	XqA5	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 6 (Slc9a6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]	3732426M05; 6430520C02Rik; mKIAA0267	3732426M05; 6430520C02Rik; mKIAA0267
Mus musculus	RefSeq	ILMN_216913	ILMN_216913	PHC1	NM_007905.2	NM_007905.2		13619	110835730	NM_007905.2	Phc1	NP_031931.2	ILMN_3064382	001190678	I	606	CAGGAGGTGCCACCCGCTCAGTCTCCTGGAGTTCATGCAGATGCAGATCA	6	-	122282540-122282589	6qF1	Mus musculus polyhomeotic-like 1 (Drosophila) (Phc1), transcript variant 1, mRNA.	A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Mph1; rae28; Rae-28; Edr; Edr1; AW557034	Mph1; rae28; Rae-28; Edr; Edr1; AW557034
Mus musculus	RefSeq	ILMN_216913	ILMN_216913	PHC1	NM_007905.2	NM_007905.2		13619	110835730	NM_007905.2	Phc1	NP_031931.2	ILMN_3142248	003400019	A	3715	TGTCCTATAGCTTCACAAAACAGGAGCGTGTGGGGCTGAGGTCAGGACTG	6	-	122267823-122267872	6qF1	Mus musculus polyhomeotic-like 1 (Drosophila) (Phc1), transcript variant 1, mRNA.	A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Mph1; rae28; Rae-28; Edr; Edr1; AW557034	Mph1; rae28; Rae-28; Edr; Edr1; AW557034
Mus musculus	RefSeq	ILMN_198713	ILMN_198713	LOC195727	XM_112126.1	XM_112126.1			20347212	XM_112126.1	LOC195727		ILMN_2532667	006040300	S	241	TCATGCCCTCTAAATGCACAATCCAAGCTCCTGATGTACATTGCACTGTT										
Mus musculus	Riken	ILMN_207394	ILMN_207394	NFIB	ri|E130304L02|PX00675C08|AK087480|2703					AK087480	Nfib		ILMN_2587277	002850044	S	2001	GGGTGGCTGAATGACAGGTAGGAAGGGCATTGCCCCAAAGGGATACATTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221556	ILMN_221556	IL8RB	NM_009909.3	NM_009909.3		12765	87299639	NM_009909.3	Il8rb	NP_034039.1	ILMN_2737157	003940121	S	2980	TGCAGAACTATCTACCTTATAATTTCTTGTAAAGTGTGACTATTAAATGT	1	+	74207757-74207806	1qC3	Mus musculus interleukin 8 receptor, beta (Il8rb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Combining with chemokines, small chemoattractant molecules normally used to stimulate leukocytes, to initiate a change in cell activity [goid 4950] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]; Combining with chemokines, small chemoattractant molecules normally used to stimulate leukocytes, to initiate a change in cell activity [goid 4950] [evidence TAS]; Combining with interleukin-8 to initiate a change in cell activity [goid 4918] [evidence TAS]	Gpcr16; Cmkar2; CDw128; IL-8Rh; IL8RA; CXCR2; CD128; mIL-8RH; IL-8rb	Gpcr16; Cmkar2; CDw128; IL-8Rh; IL8RA; CXCR2; CD128; mIL-8RH; IL-8rb
Mus musculus	RefSeq	ILMN_221556	ILMN_221556	IL8RB	NM_009909.3	NM_009909.3		12765	87299639	NM_009909.3	Il8rb	NP_034039.1	ILMN_1223834	001300095	S	1416	GGTATGCCTACTGATAGAGTTGATCCATCCTAACACTAGACCCCAAACAC	1	+	74206193-74206242	1qC3	Mus musculus interleukin 8 receptor, beta (Il8rb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Combining with chemokines, small chemoattractant molecules normally used to stimulate leukocytes, to initiate a change in cell activity [goid 4950] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]; Combining with chemokines, small chemoattractant molecules normally used to stimulate leukocytes, to initiate a change in cell activity [goid 4950] [evidence TAS]; Combining with interleukin-8 to initiate a change in cell activity [goid 4918] [evidence TAS]	Gpcr16; Cmkar2; CDw128; IL-8Rh; IL8RA; CXCR2; CD128; mIL-8RH; IL-8rb	Gpcr16; Cmkar2; CDw128; IL-8Rh; IL8RA; CXCR2; CD128; mIL-8RH; IL-8rb
Mus musculus	Riken	ILMN_204446	ILMN_204446	MTHFS	ri|A730073L23|PX00152K15|AK043235|1466					AK043235	Mthfs		ILMN_2565043	001780669	S	1045	GGCACTTATCACTGTCCCCAAACATATGGCAATCTCCCCAAATCTGTGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate [goid 30272] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210251	ILMN_320095	A230083H22RIK	XR_035391.1	XR_035391.1		353211	149270688	XR_035391.1	A230083H22Rik		ILMN_2603717	004480064	S	2424	TTTGCTGCTTTGTGGCATTCAGGACACTCACCAACAACAATGCCTGAGCC				19qB	PREDICTED: Mus musculus RIKEN cDNA A230083H22 gene (A230083H22Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_210251	ILMN_320095	A230083H22RIK	XR_035391.1	XR_035391.1		353211	149270688	XR_035391.1	A230083H22Rik		ILMN_1225912	005420221	S	712	TCTCCATCCTGGAAGAACAGTTTCCCAACCTCCCTCCGAGGGATGATATC				19qB	PREDICTED: Mus musculus RIKEN cDNA A230083H22 gene (A230083H22Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_222692	ILMN_320095	A230083H22RIK	XR_035391.1	XR_035391.1		353211	149270688	XR_035391.1	A230083H22Rik		ILMN_2753472	006940131	S	10048	GGGTAACATCGAATCGTCCAAAATTAACACTCAGATGCATTGCAAAAGCA				19qB	PREDICTED: Mus musculus RIKEN cDNA A230083H22 gene (A230083H22Rik), misc RNA.					
Mus musculus	Riken	ILMN_202268	ILMN_202268	SKD3	ri|1700017L15|ZX00050L17|AK006072|1172					AK006072	Skd3		ILMN_1259779	004830672	S	1104	GGCAGGAGAGGCCACCACTCTTCTGGCACCATGTTACTCTCCTTGAGCTA										
Mus musculus	RefSeq	ILMN_223318	ILMN_223318	ACOT10	NM_022816.1	NM_022816.1		64833	12331399	NM_022816.1	Acot10	NP_073727.1	ILMN_2910627	000020735	S	1442	GCACTCCCGGCACTGTGACATAGTGCCTAATAAAGGTGTGCTGAGAAAAA	15	-	20595014-20595063	15qA2	Mus musculus acyl-CoA thioesterase 10 (Acot10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IDA]	MT-ACT48; MGC124133; p48; MGC124134; Acate3	MT-ACT48; MGC124133; p48; MGC124134; Acate3
Mus musculus	Riken	ILMN_205221	ILMN_205221	E230011D01RIK	ri|E230011D01|PX00209D20|AK053991|3594					AK053991	E230011D01Rik		ILMN_2570913	004280397	S	2996	GGGATATGATGCTCTCTTCTGACTTCTGAGGACACCAGGCATGCTCGTGG										
Mus musculus	RefSeq	ILMN_213331	ILMN_213331	POP5	NM_026398.2	NM_026398.2		117109	31980976	NM_026398.2	Pop5	NP_080674.1	ILMN_2973928	004640445	S	941	GTGAAGGCTCTGTGCAGACATTTCGGATGTAACTGCTTAGCTCAGGGGTG	5	+	115501918-115501967	5qF	Mus musculus processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) (Pop5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex that cleaves the rRNA precursor as part of rRNA transcript processing. It also has other roles: In S. cerevisiae it is involved in cell cycle-regulated degradation of daughter cell-specific mRNAs, while in mammalian cells it also enters the mitochondria and processes RNAs to create RNA primers for DNA replication [goid 172] [evidence ISA]; A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [evidence IDA]	The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence ISA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Catalysis of the site-specific cleavage of RNA by a catalytic RNA_mediated mechanism; substrates include the A3 site in the ITS1 of pre-rRNA [goid 171] [evidence ISA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IDA]	AW049989; 2700077E03Rik; 1500019J17Rik; Rnasep3	AW049989; 2700077E03Rik; 1500019J17Rik; Rnasep3
Mus musculus	RefSeq	ILMN_213331	ILMN_213331	POP5	NM_026398.2	NM_026398.2		117109	31980976	NM_026398.2	Pop5	NP_080674.1	ILMN_2973925	003780059	S	758	CAGTGCTGGTGAGGAGGTTGCAGAAGCAATGGAGTGACCGTTTCCAGGCC	5	+	115501735-115501750:115501751-115501784	5qF	Mus musculus processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) (Pop5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex that cleaves the rRNA precursor as part of rRNA transcript processing. It also has other roles: In S. cerevisiae it is involved in cell cycle-regulated degradation of daughter cell-specific mRNAs, while in mammalian cells it also enters the mitochondria and processes RNAs to create RNA primers for DNA replication [goid 172] [evidence ISA]; A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [evidence IDA]	The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence ISA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Catalysis of the site-specific cleavage of RNA by a catalytic RNA_mediated mechanism; substrates include the A3 site in the ITS1 of pre-rRNA [goid 171] [evidence ISA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IDA]	AW049989; 2700077E03Rik; 1500019J17Rik; Rnasep3	AW049989; 2700077E03Rik; 1500019J17Rik; Rnasep3
Mus musculus	RefSeq	ILMN_201296	ILMN_201296	LOC382386	XM_356478.1	XM_356478.1			38090622	XM_356478.1	LOC382386		ILMN_1233854	005860114	S	322	GGACCTTGTAACCGGCCTGTGCGTAAACTTGTGTGTAGAGGGAGTCAGGC										
Mus musculus	RefSeq	ILMN_194687	ILMN_230644	LOC666238	XM_982514.1	XM_982514.1		666238	94395285	XM_982514.1	LOC666238	XP_987608.1	ILMN_2508682	006380010	S	752	CTGTGACCTCATGCTCAGGATACTCAGAGGGAGCACTCTCCAAAACCTCA	13	-	68368014-68368063	13qB3	PREDICTED: Mus musculus similar to CG32602-PA (LOC666238), mRNA.					
Mus musculus	RefSeq	ILMN_229579	ILMN_229579	OTTMUSG00000004966	NM_001039502.2	NM_001039502.2		629873	142363747	NM_001039502.2	OTTMUSG00000004966	NP_001034591.1	ILMN_3161268	005220008	S	727	CTGTTCCTGGAGGTGGAACTCTTCATCAGGATCCCCAAAGGCGTGCTGGA	11	-	99444215-99444264	11qD	Mus musculus predicted gene, OTTMUSG00000004966 (OTTMUSG00000004966), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_220001	ILMN_220001	GAB1	NM_021356.2	NM_021356.2		14388	31542870	NM_021356.2	Gab1	NP_067331.2	ILMN_1222009	007200678	S	4580	GTCTGCAGCTGAGGCTTGTCTCTCTTCGTTCAGACCTCTTACCTGTTGCC	8	-	83288562-83288611	8qC2	Mus musculus growth factor receptor bound protein 2-associated protein 1 (Gab1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IGI]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]	AW107238; AA408973	AW107238; AA408973
Mus musculus	RefSeq	ILMN_198771	ILMN_249685	GM166	NM_001033040.2	NM_001033040.2		233899	142377175	NM_001033040.2	Gm166	NP_001028212.1	ILMN_2532865	002900187	S	1458	GAGCAGCCGTTCCAGACACCTCCCAGCAAAGGCAAGACCAAGACCAAGTG	7	-	134726925-134726974	7qF3	Mus musculus gene model 166, (NCBI) (Gm166), mRNA.					
Mus musculus	RefSeq	ILMN_189533	ILMN_252167	PECAM1	NM_008816.2	NM_008816.2		18613	74024906	NM_008816.2	Pecam1	NP_032842.2	ILMN_2700982	001030739	S	2540	CCCCGCTGCCTTGTTCATGTTGGGTATACAGAGACTCAGAGGCGCTAGTT	11	-	106516247-106516296	11qE1	Mus musculus platelet/endothelial cell adhesion molecule 1 (Pecam1), transcript variant 1, mRNA.	Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC102160; Cd31; Pecam; PECAM-1	MGC102160; Cd31; Pecam; PECAM-1
Mus musculus	RefSeq	ILMN_199468	ILMN_199468	LOC383525	XM_357104.1	XM_357104.1			38049610	XM_357104.1	LOC383525		ILMN_2535318	003420707	S	201	CATTATTCGTGGGACAAAACTATATGAAGATCGCTATGCCTTAGCGATAT										
Mus musculus	RefSeq	ILMN_214342	ILMN_214342	COPZ2	NM_019877.2	NM_019877.2		56358	142388340	NM_019877.2	Copz2	NP_063930.1	ILMN_1232208	004920056	S	289	GGGGGGCATGACTATCGTCTACAAGAGCAGCATTGACATCTTCCTGTATG	11	+	96715388-96715437	11qD	Mus musculus coatomer protein complex, subunit zeta 2 (Copz2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence ISS]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110012D12Rik; zeta2-COP	1110012D12Rik; zeta2-COP
Mus musculus	RefSeq	ILMN_214342	ILMN_214342	COPZ2	NM_019877.2	NM_019877.2		56358	142388340	NM_019877.2	Copz2	NP_063930.1	ILMN_1237090	000630195	S	634	ATGAAGACCTTGGAATCAAGGCTCCTTCCCCAGAGAACTTTTGCCAGTCC	11	+	96722221-96722224:96722225-96722270	11qD	Mus musculus coatomer protein complex, subunit zeta 2 (Copz2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence ISS]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110012D12Rik; zeta2-COP	1110012D12Rik; zeta2-COP
Mus musculus	RefSeq	ILMN_214342	ILMN_214342	COPZ2	NM_019877.2	NM_019877.2		56358	142388340	NM_019877.2	Copz2	NP_063930.1	ILMN_2647028	001070575	S	430	GGAGAAACGCTGGTTGCTGGAGAACATGGACGGAGCCTTCTTGGTGCTGG	11	+	96716579-96716628	11qD	Mus musculus coatomer protein complex, subunit zeta 2 (Copz2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence ISS]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110012D12Rik; zeta2-COP	1110012D12Rik; zeta2-COP
Mus musculus	RefSeq	ILMN_245918	ILMN_245918	CYP4X1	NM_001003947.1	NM_001003947.1		81906	51592064	NM_001003947.1	Cyp4x1	NP_001003947.1	ILMN_3163399	001440725	A	1242	CCCTGCTGTCTGGAACGACCCAAAGGTCTTTGACCCCTTGAGATTCACTA	4	-	114794154-114794178:114794230-114794254	4qD1	Mus musculus cytochrome P450, family 4, subfamily x, polypeptide 1 (Cyp4x1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	CYP_a; A230025G20; Cyp4a28-ps	CYP_a; A230025G20; Cyp4a28-ps
Mus musculus	RefSeq	ILMN_210501	ILMN_210501	NMNAT3	NM_144533.2	NM_144533.2		74080	118130024	NM_144533.2	Nmnat3	NP_653116.1	ILMN_2616151	000130619	S	667	ATTCGGGTGGACCCCTGGGAGAGTGAGCAGGCGCAGTGGATGGAAACGGT	9	+	98299997-98300046	9qE3.3	Mus musculus nicotinamide nucleotide adenylyltransferase 3 (Nmnat3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [evidence IDA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + nicotinamide nucleotide = diphosphate + NAD+ [goid 309] [evidence IDA]	PNAT3; MGC102340; 4933408N02Rik	PNAT3; MGC102340; 4933408N02Rik
Mus musculus	RefSeq	ILMN_210501	ILMN_210501	NMNAT3	NM_144533.2	NM_144533.2		74080	118130024	NM_144533.2	Nmnat3	NP_653116.1	ILMN_1223343	006510181	S	1971	TTGATACACCATGTATTTTTACACTGCTATACTCTAAGCACCAGGGTTCC	9	+	98311658-98311707	9qE3.3	Mus musculus nicotinamide nucleotide adenylyltransferase 3 (Nmnat3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [evidence IDA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + nicotinamide nucleotide = diphosphate + NAD+ [goid 309] [evidence IDA]	PNAT3; MGC102340; 4933408N02Rik	PNAT3; MGC102340; 4933408N02Rik
Mus musculus	RefSeq	ILMN_208979	ILMN_208979	TAX1BP1	NM_025816.2	NM_025816.2		52440	142384504	NM_025816.2	Tax1bp1	NP_080092.1	ILMN_2591414	000840475	S	2889	CCTCAGCACAATCACACTTACAAGTTTCTGTACACCTTGGCGATTGAGCA	6	+	52716397-52716446	6qB3	Mus musculus Tax1 (human T-cell leukemia virus type I) binding protein 1 (Tax1bp1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	TXBP151; AA930106; 1700069J21Rik; T6bp; D6Ertd772e; D6Ertd404e; 1200003J11Rik	TXBP151; AA930106; 1700069J21Rik; T6bp; D6Ertd772e; D6Ertd404e; 1200003J11Rik
Mus musculus	RefSeq	ILMN_198648	ILMN_198648	LOC233166	XM_145540.5	XM_145540.5			38086648	XM_145540.5	LOC233166		ILMN_1255067	004560324	S	2106	CAGTGCCCCCAAAGAGAAAGGAACCACCAGCCTCACCCCAACTATCCAGA										
Mus musculus	RefSeq	ILMN_219846	ILMN_247757	OLFR48	NM_010990.1	NM_010990.1		18347	70778831	NM_010990.1	Olfr48	NP_035120.1	ILMN_2714323	007100131	S	721	GTGGTCATCTTATTCTTTGTGCCTTGCATATTTGTGTATCTTCGCCCAGT	2	-	89684358-89684407	2qE1	Mus musculus olfactory receptor 48 (Olfr48), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR232-5; IC3; C3	MOR232-5; IC3; C3
Mus musculus	RefSeq	ILMN_247757	ILMN_247757	OLFR48	NM_010990.1	NM_010990.1		18347	70778831	NM_010990.1	Olfr48	NP_035120.1	ILMN_2940185	002850722	S	650	TCGATGCTCTAAAATCTCACAGCAAGGAGGGAAGGTGCAAAGCCCTCTCC	2	-	89684429-89684478	2qE1	Mus musculus olfactory receptor 48 (Olfr48), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR232-5; IC3; C3	MOR232-5; IC3; C3
Mus musculus	RefSeq	ILMN_199948	ILMN_248840	LOC625574	XM_890156.2	XM_890156.2		625574	94371965	XM_890156.2	LOC625574	XP_895249.1	ILMN_1229856	005720528	S	192	CTGCCTGGAGGCTAATCCCCTGATATGTAACTGGTTCATCAATGTCCGGC	4	+	88862959-88862969:88863188-88863226	4qC4	PREDICTED: Mus musculus similar to TGFB-induced factor 2 (LOC625574), mRNA.					
Mus musculus	RefSeq	ILMN_221059	ILMN_221059	B230358A15RIK	NM_172931.1	NM_172931.1		245525	27370437	NM_172931.1	B230358A15Rik	NP_766519.1	ILMN_2730549	005810682	S	2577	CAGATCTCATTTAGTGATGGCTGAGCTTTTGATATGCAGGAGTAACCTGG	X	-	92508961-92509010	XqC3	Mus musculus RIKEN cDNA B230358A15 gene (B230358A15Rik), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	RP23-348N10.1	RP23-348N10.1
Mus musculus	RefSeq	ILMN_206823	ILMN_243033	NPR3	NM_001039181.1	NM_001039181.1		18162	85702367	NM_001039181.1	Npr3	NP_001034270.1	ILMN_1231426	000620307	S	4770	GGAGAGGGAGAATCCTATGGAATGAGAACAGATGCCCCACCCCCACTTCC	15	-	11771755-11771804	15qA1	Mus musculus natriuretic peptide receptor 3 (Npr3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	stri; NPR-C; lgj; C81222; B430320C24Rik	stri; NPR-C; lgj; C81222; B430320C24Rik
Mus musculus	RefSeq	ILMN_185125	ILMN_243033	NPR3	NM_001039181.1	NM_001039181.1		18162	85702367	NM_001039181.1	Npr3	NP_001034270.1	ILMN_1236914	001110056	S	1692	GATGGAAGGACAGACATCAACGGAGCAGAAAGGGCGTTCTCGGAGAAGTC	15	-	11774833-11774882	15qA1	Mus musculus natriuretic peptide receptor 3 (Npr3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	stri; NPR-C; lgj; C81222; B430320C24Rik	stri; NPR-C; lgj; C81222; B430320C24Rik
Mus musculus	RefSeq	ILMN_193370	ILMN_243033	NPR3	NM_001039181.1	NM_001039181.1		18162	85702367	NM_001039181.1	Npr3	NP_001034270.1	ILMN_2496537	002900671	S	6596	GGTAGAAGAGTCAAAGCTGCACCAGCTACATATAGCTTCCTATTCTAATG	15	-	11769929-11769978	15qA1	Mus musculus natriuretic peptide receptor 3 (Npr3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	stri; NPR-C; lgj; C81222; B430320C24Rik	stri; NPR-C; lgj; C81222; B430320C24Rik
Mus musculus	RefSeq	ILMN_199184	ILMN_199184	LOC216798	XM_126346.3	XM_126346.3			38091642	XM_126346.3	LOC216798		ILMN_2534342	004010112	S	810	CACCACAATCTGGAAATGGCTCACCAAGTGTGCAGACAACTCCGAAACAG										
Mus musculus	RefSeq	ILMN_196869	ILMN_259829	LOC633789	XR_002187.1	XR_002187.1		633789	94392411	XR_002187.1	LOC633789		ILMN_1259279	006840725	S	362	CCCTAGGGACGGAAGACAGGGCTGCTCTTTTCGGAAGCACACGGGATATC	12	-	13815448-13815497	12qA1.1	PREDICTED: Mus musculus similar to Pleckstrin homology domain-containing family G member 1 (LOC633789), mRNA.					
Mus musculus	RefSeq	ILMN_239066	ILMN_239066	FZD6	NM_008056.2	NM_008056.2		14368	31542830	NM_008056.2	Fzd6	NP_032082.2	ILMN_3004386	002750053	S	3785	ATGTGCGAAGGGCAGAGTCAGAGTTGGGCAGGGAGAGTGTAGTGCAGCAG	15	+	38869455-38869504	15qB3.1	Mus musculus frizzled homolog 6 (Drosophila) (Fzd6), mRNA.	The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The apical end of the lateral plasma membrane of epithelial cells [goid 16327] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates [goid 1736] [evidence IGI]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]	Fz6	Fz6
Mus musculus	RefSeq	ILMN_215388	ILMN_215388	TG	NM_009375.2	NM_009375.2		21819	124430575	NM_009375.2	Tg	NP_033401.2	ILMN_2658878	000580685	S	8139	GGCAGGGCCTCAAACAAGCTGACTGCTCCTTCTGGTCCAAGTACATCCAG	15	+	66681125-66681174	15qD2	Mus musculus thyroglobulin (Tg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of either of the compounds secreted by the thyroid gland, mainly thyroxine and triiodothyronine. This is achieved by the iodination and joining of tyrosine molecules to form the precursor thyroglobin, proteolysis of this precursor gives rise to the thyroid hormones [goid 6590] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC117699; cog; Tgn	MGC117699; cog; Tgn
Mus musculus	RefSeq	ILMN_187810	ILMN_187810	TOP2A	NM_011623.1	NM_011623.1		21973	6755848	NM_011623.1	Top2a	NP_035753.1	ILMN_2830661	004250403	S	4311	CTTCAGTCTCCACTGCTGGTACCAAAAAGAGAGCTGCGCCAAAGGGAACC	11	-	98855664-98855713	11qD	Mus musculus topoisomerase (DNA) II alpha (Top2a), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells [goid 30261] [evidence IMP]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IMP]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA [goid 3916] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IGI]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IDA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IGI]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Top-2	Top-2
Mus musculus	RefSeq	ILMN_189468	ILMN_236433	AMOTL1	NM_001081395.1	NM_001081395.1		75723	124487106	NM_001081395.1	Amotl1	NP_001074864.1	ILMN_1253634	003870333	S	8731	CCCAGCGGACTCTGGTATCCATGTGTAACCTTTGGCACCTGTGTTACTGG	9	-	14346580-14346629	9qA1-qA2	Mus musculus angiomotin-like 1 (Amotl1), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISO]	JEAP; 4932416D09Rik; 2310067L22Rik; FLJ00155; mFLJ00155; 2310010G08Rik	JEAP; 4932416D09Rik; 2310067L22Rik; FLJ00155; mFLJ00155; 2310010G08Rik
Mus musculus	RefSeq	ILMN_189468	ILMN_236433	AMOTL1	NM_001081395.1	NM_001081395.1		75723	124487106	NM_001081395.1	Amotl1	NP_001074864.1	ILMN_2626401	007100593	S	7230	GTGCAGCTCCGTGGAACAGGTTGTGTAATAAGAAACCTCAGAAGCCAGGC	9	-	14348081-14348130	9qA1-qA2	Mus musculus angiomotin-like 1 (Amotl1), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISO]	JEAP; 4932416D09Rik; 2310067L22Rik; FLJ00155; mFLJ00155; 2310010G08Rik	JEAP; 4932416D09Rik; 2310067L22Rik; FLJ00155; mFLJ00155; 2310010G08Rik
Mus musculus	RefSeq	ILMN_199744	ILMN_199744	LOC386449	XM_359270.1	XM_359270.1			38076764	XM_359270.1	LOC386449		ILMN_1225750	002350692	S	262	TGCCCTGAACTCTTCCAAGAGGTGGCACCCCAAACAGAGCTCAGCCTTCC										
Mus musculus	RefSeq	ILMN_220246	ILMN_220246	ACOT12	NM_028790.1	NM_028790.1		74156	18482376	NM_028790.1	Acot12	NP_083066.1	ILMN_2719650	006040184	S	2884	ATAGACAGTATGGACTCCAGTTTGCAGGATCTACCTTACCCAGGATGGGT	13	+	92260222-92260271	13qC3	Mus musculus acyl-CoA thioesterase 12 (Acot12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence TAS]; The chemical reactions and pathways involving acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis [goid 6084] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + H2O = CoA + acetate [goid 3986] [evidence IDA]	AV027244; mCACH-1; 4930449F15Rik; Cach; 1300004O04Rik	AV027244; mCACH-1; 4930449F15Rik; Cach; 1300004O04Rik
Mus musculus	RefSeq	ILMN_218132	ILMN_218132	OLFR715	NM_146780.1	NM_146780.1		258776	22129286	NM_146780.1	Olfr715	NP_666991.1	ILMN_2692033	002650707	S	886	AAGGGAGCTTTGTGGAAAGTAGCCATGAAGAACTTCTCAAGCAGGCTTAG	7	-	114271970-114272019	7qE3	Mus musculus olfactory receptor 715 (Olfr715), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR260-1	MOR260-1
Mus musculus	Riken	ILMN_202016	ILMN_202016	2810403G11RIK	ri|2810403G11|ZX00046I22|AK012975|2375					AK012975	2810403G11Rik		ILMN_2546381	005260402	S	2152	TGGTGCCCATGGAAGCCAGAGAAGGGCAATGGATCCCTAGAACCTGAGTT										
Mus musculus	RefSeq	ILMN_209009	ILMN_209009	E330017A01RIK	NM_175011.1	NM_175011.1		224247	33239382	NM_175011.1	E330017A01Rik	NP_778176.1	ILMN_2913664	004570133	S	502	GGAAGCCCAGACTGAACAACCTTCTACTTCATCGGGTGTAAAAGGGTACC	16	-	58577930-58577979	16qC1.2	Mus musculus RIKEN cDNA E330017A01 gene (E330017A01Rik), mRNA.				MGC117520	MGC117520
Mus musculus	RefSeq	ILMN_219032	ILMN_219032	GABRR1	NM_008075.1	NM_008075.1		14408	6679918	NM_008075.1	Gabrr1	NP_032101.1	ILMN_2854708	006770253	S	1879	GCTCTGGGAAGTACCTAAATAAAATGCGTTTGCATTGAGCCCACAGGCCC	4	+	33250191-33250240	4qA5	Mus musculus gamma-aminobutyric acid (GABA-C) receptor, subunit rho 1 (Gabrr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]	GABA-C	GABA-C
Mus musculus	RefSeq	ILMN_219032	ILMN_219032	GABRR1	NM_008075.1	NM_008075.1		14408	6679918	NM_008075.1	Gabrr1	NP_032101.1	ILMN_1217502	002370338	S	1772	CCAGGAAAAGCACAGAGGACATATGGACATGTCGCAATCAGGAGCCCCTG	4	+	33250084-33250133	4qA5	Mus musculus gamma-aminobutyric acid (GABA-C) receptor, subunit rho 1 (Gabrr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]	GABA-C	GABA-C
Mus musculus	MEEBO	ILMN_196201	ILMN_196201	D830007B15RIK	scl27742.5.1_226				51827474	XM_485619	D830007B15Rik		ILMN_2522532	000160520	S	16	TAGAGGGGGTGGGGGGATAGGAGATGACCCCCTAGGGGGATCACATCTTT										
Mus musculus	RefSeq	ILMN_215106	ILMN_215106	B3GNT7	NM_145222.1	NM_145222.1		227327	21644580	NM_145222.1	B3gnt7	NP_660257.1	ILMN_2655571	007610373	S	1831	GACTGGCCGCTCTGACTACCTCAGCACTCCTCTAAACCTCAGTGTGGGCT	1	+	88203363-88203412	1qD	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 (B3gnt7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence ISS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence ISS]	beta-3GnT7; C330001H22Rik	beta-3GnT7; C330001H22Rik
Mus musculus	RefSeq	ILMN_190681	ILMN_319888	LOC100045960	XM_001475270.1	XM_001475270.1		100045960	149256782	XM_001475270.1	LOC100045960	XP_001475320.1	ILMN_1256426	000430092	S	2681	ATCTTGCACTCATTCAGTTTCTTCATTTTCTCTCAGAGAACTAAACTCTC					PREDICTED: Mus musculus similar to vomeronasal 2, receptor, 15, transcript variant 2 (LOC100045960), mRNA.					
Mus musculus	Riken	ILMN_207240	ILMN_207240	G430096H01RIK	ri|G430096H01|PH00002A13|AK090087|1235					AK090087	G430096H01Rik		ILMN_1260394	007100041	S	935	CGCCTGAACAGTGGCACAATCAGGAAGAGAAGGAAGAGAGTCTACGTCCA										
Mus musculus	RefSeq	ILMN_198672	ILMN_260163	LOC621984	XR_004704.1	XR_004704.1		621984	94408204	XR_004704.1	LOC621984		ILMN_2532516	002450201	S	808	CCATCGATGTGTAGTCAGCTGGCTGTGTACTGGCTGAGTTACTTCTCAGC				XqF1	PREDICTED: Mus musculus similar to glycogen synthase kinase 3 alpha (LOC621984), misc RNA.					
Mus musculus	RefSeq	ILMN_211306	ILMN_211306	RAG1AP1	NM_009057.2	NM_009057.2		19729	142353618	NM_009057.2	Rag1ap1	NP_033083.1	ILMN_2614486	000830491	S	959	GAGGCTGAGGTGGTATTAGAATGTGCCTTAAAATAAACTGTTCCCCACCC	3	-	89072171-89072220	3qF1	Mus musculus recombination activating gene 1 activating protein 1 (Rag1ap1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]		Rga	Rga
Mus musculus	RefSeq	ILMN_221402	ILMN_221402	KRT20	NM_023256.1	NM_023256.1		66809	21592284	NM_023256.1	Krt20	NP_075745.1	ILMN_2907285	004610327	S	1660	GTGAACGGGTTCTCCAGGGAGGCAACTTCCCAGTTAATCTCATTGTCTCC	11	-	99289937-99289986	11qD	Mus musculus keratin 20 (Krt20), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50708] [evidence IDA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 33554] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	K20; CK20; 9030623C06Rik; KRT21	K20; CK20; 9030623C06Rik; KRT21
Mus musculus	RefSeq	ILMN_188729	ILMN_249353	1700012B09RIK	NM_029306.2	NM_029306.2		69325	142355293	NM_029306.2	1700012B09Rik	NP_083582.1	ILMN_1251239	002970431	S	384	CCACAAGCCAAGTACTACTCGAGGCACGGAGGACTGAGAAGATAAGATGG	9	-	14562889-14562894:14562895-14562899:14566049-14566087	9qA2	Mus musculus RIKEN cDNA 1700012B09 gene (1700012B09Rik), mRNA.				1700007P19Rik; MGC107243	1700007P19Rik; MGC107243
Mus musculus	Riken	ILMN_204318	ILMN_204318	PDE4B	ri|6330520K10|PX00043K18|AK031977|2291					AK031977	Pde4b		ILMN_1249295	002760035	S	1621	GCGTATGCTGTTATTTCATTGTGCTCGGTTGCCTGTAGAACACACGTGGT							A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]	Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence ISS]		
Mus musculus	RefSeq	ILMN_196568	ILMN_196568	CHD3	NM_146019.1	NM_146019.1			22122486	NM_146019.1	Chd3		ILMN_2524861	006980242	S	1846	ACGCTGGGGCTCAGGTTTCTAGGGGACGAAATCCTCCCTCTTCAAGGCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IDA]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]	The formation or destruction of chromatin structures [goid 6333] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205208	ILMN_205208	D030032C23RIK	ri|D030032C23|PX00179P03|AK050901|1182					AK050901	D030032C23Rik		ILMN_1253840	003360221	S	719	CAGGTGATTGCAAAGGCTGGGAGTTGGAGCCAGGCCTAGGACGATAGGTC										
Mus musculus	RefSeq	ILMN_202831	ILMN_243659	NEK1	NM_175089.3	NM_175089.3		18004	124107626	NM_175089.3	Nek1	NP_780298.2	ILMN_1258057	000990341	S	1720	GGTTCCTGAAGGCTGAGCAGATGAAGCGGCAAGAGAAGCAGCGGTTGGAG	8	+	63522861-63522904:63523056-63523061	8qB3.1	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 1 (Nek1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISA]	kat; D8Ertd790e	kat; D8Ertd790e
Mus musculus	RefSeq	ILMN_207432	ILMN_243659	NEK1	NM_175089.3	NM_175089.3		18004	124107626	NM_175089.3	Nek1	NP_780298.2	ILMN_1251456	002570195	S	3318	GTAGACGATTCTCCGCAGTCTGGCTGTGATGTAGAGAAGTCAGTACAGCC	8	+	63585600-63585649	8qB3.1	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 1 (Nek1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISA]	kat; D8Ertd790e	kat; D8Ertd790e
Mus musculus	RefSeq	ILMN_201803	ILMN_243659	NEK1	NM_175089.3	NM_175089.3		18004	124107626	NM_175089.3	Nek1	NP_780298.2	ILMN_1225067	005870575	S	2418	ACAGGTGGTTCTCCATCAAAGCAGCAGGTGAAGCCTGTCATTTCTGTGAC	8	+	63565250-63565299	8qB3.1	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 1 (Nek1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISA]	kat; D8Ertd790e	kat; D8Ertd790e
Mus musculus	Riken	ILMN_204237	ILMN_204237	B130008D24RIK	ri|B130008D24|PX00156B08|AK044854|1191					AK044854	B130008D24Rik		ILMN_2563435	006960047	S	1005	GGGACTGTAGCTCACTTGGTAGAGTGCCTGCTTAGCATGCTGGAAGCTGC										
Mus musculus	RefSeq	ILMN_203545	ILMN_230079	NAT11	XM_912399.2	XM_912399.2		70999	94405782	XM_912399.2	Nat11	XP_917492.1	ILMN_2558125	000730431	S	2860	GGGTGTTAAGCCCAGTGGTTCATCAGGCATCGTCTACCGCCCTCTTGTTT				19qA	PREDICTED: Mus musculus N-acetyltransferase 11, transcript variant 9 (Nat11), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190975	ILMN_313991	LOC100045726	XM_001474673.1	XM_001474673.1		100045726	149250914	XM_001474673.1	LOC100045726	XP_001474723.1	ILMN_1223968	006330382	S	1132	CAGGAGCTGAAGCCCACTGTCCTCCTTGCTGTTTATCTGCATTTTGGAGA					PREDICTED: Mus musculus hypothetical protein LOC100045726 (LOC100045726), mRNA.					
Mus musculus	RefSeq	ILMN_220814	ILMN_220814	SLC4A9	NM_172830.2	NM_172830.2		240215	118129949	NM_172830.2	Slc4a9	NP_766418.1	ILMN_2727251	002650730	S	2078	GGCCCACATAGACAGTCTTCGGAGAGAGAGCAAAGCCTGCATCCCTGGAG	18	+	36695281-36695330	18qB2	Mus musculus solute carrier family 4, sodium bicarbonate cotransporter, member 9 (Slc4a9), mRNA.	The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence ISS]			D630024F24Rik; D630003B07; AE4	D630024F24Rik; D630003B07; AE4
Mus musculus	RefSeq	ILMN_199581	ILMN_199581	LOC383681	XM_357183.1	XM_357183.1			38074670	XM_357183.1	LOC383681		ILMN_1247430	001470592	S	52	CAGCCGAAGGAGAAGGGGGGTAAGCCTGGTACTGTGGCACTCCCTGAAAT										
Mus musculus	RefSeq	ILMN_197555	ILMN_324295	EG666756	XR_033930.1	XR_033930.1		666756	149251083	XR_033930.1	EG666756		ILMN_1214902	001110131	S	1755	TCCTCTTATTCAAGCCGTGCACCCTTCTCTTGCTGGTAAAATGCTGTTGG				3qD	PREDICTED: Mus musculus predicted gene, EG666756 (EG666756), misc RNA.					
Mus musculus	RefSeq	ILMN_214067	ILMN_214067	TCIRG1	NM_016921.2	NM_016921.2		27060	31980623	NM_016921.2	Tcirg1	NP_058617.2	ILMN_2643876	003180538	S	459	AAACGGATCGCTTGGCCCAGGAGCTTCGGGATGTTCGTGGCAATCAGCAG	19	-	3903577-3903626	19qA	Mus musculus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 (Tcirg1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]			ATP6N1C; ATP6a3; OPTB1; Stv1; Atp6i; oc; OC-116; Vph1; TIRC7	ATP6N1C; ATP6a3; OPTB1; Stv1; Atp6i; oc; OC-116; Vph1; TIRC7
Mus musculus	RefSeq	ILMN_214067	ILMN_214067	TCIRG1	NM_016921.2	NM_016921.2		27060	31980623	NM_016921.2	Tcirg1	NP_058617.2	ILMN_2643879	004050519	S	453	GGAGGAAACGGATCGCTTGGCCCAGGAGCTTCGGGATGTTCGTGGCAATC	19	-	3903583-3903632	19qA	Mus musculus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 (Tcirg1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]			ATP6N1C; ATP6a3; OPTB1; Stv1; Atp6i; oc; OC-116; Vph1; TIRC7	ATP6N1C; ATP6a3; OPTB1; Stv1; Atp6i; oc; OC-116; Vph1; TIRC7
Mus musculus	RefSeq	ILMN_214067	ILMN_214067	TCIRG1	NM_016921.2	NM_016921.2		27060	31980623	NM_016921.2	Tcirg1	NP_058617.2	ILMN_2954881	002570301	S	2409	AGCTGTCTGAGGTCCTGTGGGCCATGGTGATGCGCATAGGCCTGGGCATG	19	-	3896397-3896446	19qA	Mus musculus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 (Tcirg1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]			ATP6N1C; ATP6a3; OPTB1; Stv1; Atp6i; oc; OC-116; Vph1; TIRC7	ATP6N1C; ATP6a3; OPTB1; Stv1; Atp6i; oc; OC-116; Vph1; TIRC7
Mus musculus	RefSeq	ILMN_214067	ILMN_214067	TCIRG1	NM_016921.2	NM_016921.2		27060	31980623	NM_016921.2	Tcirg1	NP_058617.2	ILMN_2746456	004760324	S	2421	TCCTGTGGGCCATGGTGATGCGCATAGGCCTGGGCATGGGCCGAGAGATC	19	-	3896385-3896434	19qA	Mus musculus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 (Tcirg1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]			ATP6N1C; ATP6a3; OPTB1; Stv1; Atp6i; oc; OC-116; Vph1; TIRC7	ATP6N1C; ATP6a3; OPTB1; Stv1; Atp6i; oc; OC-116; Vph1; TIRC7
Mus musculus	RefSeq	ILMN_238722	ILMN_238722	PSAP	NM_011179.2	NM_011179.2		19156	34328184	NM_011179.2	Psap	NP_035309.2	ILMN_2845080	003610440	S	2313	CTGGACTGTTTGGGGTCCTGCACGGCTTTCCCACCACCTGTAGCTCTTGT	10	+	59765111-59765160	10qB4	Mus musculus prosaposin (Psap), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]		SGP-1; AI037048	SGP-1; AI037048
Mus musculus	RefSeq	ILMN_186099	ILMN_186099	WIPF1	NM_153138.3	NM_153138.3		215280	118130115	NM_153138.3	Wipf1	NP_694778.1	ILMN_1257209	002120647	S	4227	CTTTCCCTGTTCATAGGCAGGAGCTGTAGAGGAATTTTTTCATACCACTG	2	-	73267794-73267843	2qC3	Mus musculus WAS/WASL interacting protein family, member 1 (Wipf1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	WIP; Waspip; D2Ertd120e; AI115543	WIP; Waspip; D2Ertd120e; AI115543
Mus musculus	RefSeq	ILMN_197179	ILMN_197179	LOC207999	XM_140832.2	XM_140832.2			38074474	XM_140832.2	LOC207999		ILMN_2527198	000130035	S	223	AGGCAGAAGGATGATGGGAAGACGCCGCAGGGAGCCATCCCCACCTATCT										
Mus musculus	RefSeq	ILMN_256426	ILMN_256426	GM853	NM_001034872.1	NM_001034872.1		332942	85702212	NM_001034872.1	Gm853	NP_001030044.1	ILMN_2956688	001230497	S	1342	GGTGCCTACAGTAGCTCCATGAGTTCCACCTTCAATGGCTTCCCGATCGC	4	-	129712700-129712749	4qD2.2	Mus musculus gene model 853, (NCBI) (Gm853), mRNA.		The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups [goid 6596] [evidence IEA]			
Mus musculus	RefSeq	ILMN_193143	ILMN_238218	AKAP13	XM_907140.3	XM_907140.3		75547	149257369	XM_907140.3	Akap13	XP_912233.3	ILMN_2494465	000070452	S	12523	CTGTACTAAGCCCTATTAAATAAAAAGTCGGGTTAAACCCAAGTGCTGTA				7qD2	PREDICTED: Mus musculus A kinase (PRKA) anchor protein 13, transcript variant 11 (Akap13), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222331	ILMN_238218	AKAP13	XM_907140.3	XM_907140.3		75547	149257369	XM_907140.3	Akap13	XP_912233.3	ILMN_2748120	003130181	S	5238	CGGTGGTGAGGAACAGAGAAACTCTTTGATGTCACTTTCAGAAGAACATC				7qD2	PREDICTED: Mus musculus A kinase (PRKA) anchor protein 13, transcript variant 11 (Akap13), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222214	ILMN_222214	TMEM66	NM_026432.2	NM_026432.2		67887	31982646	NM_026432.2	Tmem66	NP_080708.2	ILMN_2758878	000630725	S	377	CCCCAGGGTGATACAGTGCCAGAACAAAGGCTGGGATGGCTACGATGTAC	8	+	35224376-35224425	8qA4	Mus musculus transmembrane protein 66 (Tmem66), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1810045K07Rik	1810045K07Rik
Mus musculus	RefSeq	ILMN_222214	ILMN_222214	TMEM66	NM_026432.2	NM_026432.2		67887	31982646	NM_026432.2	Tmem66	NP_080708.2	ILMN_1258965	004390131	S	1472	GGCTTTGGACCATGAGTCATTCCCTCGTAGAAACAACGATCCTCTATTGG	8	+	35233499-35233548	8qA4	Mus musculus transmembrane protein 66 (Tmem66), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1810045K07Rik	1810045K07Rik
Mus musculus	RefSeq	ILMN_222214	ILMN_222214	TMEM66	NM_026432.2	NM_026432.2		67887	31982646	NM_026432.2	Tmem66	NP_080708.2	ILMN_2881296	004120220	S	1855	TTTCAGGCGGTAGCATTCAGACGCAAAAGCATGGAGTTCTCTGTGGAGTC				8qA4	Mus musculus transmembrane protein 66 (Tmem66), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1810045K07Rik	1810045K07Rik
Mus musculus	RefSeq	ILMN_210827	ILMN_210827	SNX10	NM_028035.3	NM_028035.3		71982	142369538	NM_028035.3	Snx10	NP_082311.2	ILMN_2609614	003450167	S	2349	GCAGCTGTGTGTAGAGTTTCAGAGCAAGTTCCTCAGCAGTGTAGATGAAT	6	+	51540451-51540500	6qB3	Mus musculus sorting nexin 10 (Snx10), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	2410004M09Rik	2410004M09Rik
Mus musculus	Riken	ILMN_202021	ILMN_202021	1700022J01RIK	ri|1700022J01|ZX00050B24|AK006243|589					AK006243	1700022J01Rik		ILMN_2546423	005220167	S	463	GTATTGCTGGCCTGGAGTGTGACAGAGAAGTTCTAAAACCCACCACCAGC										
Mus musculus	RefSeq	ILMN_245103	ILMN_245103	VWA1	NM_147776.2	NM_147776.2		246228	31559908	NM_147776.2	Vwa1	NP_680085.2	ILMN_2958794	006960025	S	2795	GGGAGGTGGCTGTTTGTGTGACGATGGCTTGAGATACAAGGCCCTAGCCG	4	-	154612543-154612592	4qE2	Mus musculus von Willebrand factor A domain containing 1 (Vwa1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DKFZp7610051; WARP; 4932416A11Rik	DKFZp7610051; WARP; 4932416A11Rik
Mus musculus	MEEBO	ILMN_185490	ILMN_185490	NPC1	scl51647.25_267				6679103	NM_008720	Npc1		ILMN_2762823	002710026	S	4877	GAGGATGTTGTAGGTACTTTATTACATTTTTTTGTAGTTTAAAGAGCTTT						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IEA]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence IMP]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IMP]	Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204733	ILMN_204733	NT5	ri|B930026A07|PX00163N01|AK047143|2639					AK047143	Nt5		ILMN_2567212	003840468	S	2377	GGGAGGCGACCTACTAAACACTAGTCAGATAGGCTGACATGAGGTCTTTC										
Mus musculus	RefSeq	ILMN_251498	ILMN_251498	OLFR1357	NM_001011737.1	NM_001011737.1		257883	58801267	NM_001011737.1	Olfr1357	NP_001011737.1	ILMN_2784096	004850630	S	869	ACAGCCTAAGGAACAAGGACATGAAGGCAGCCCTGAGGAAGCTTGGCAGC	10	-	78074466-78074515	10qC1	Mus musculus olfactory receptor 1357 (Olfr1357), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR128-4; MOR128-3	MOR128-4; MOR128-3
Mus musculus	RefSeq	ILMN_223932	ILMN_240636	NEDD8	NM_008683.3	NM_008683.3		18002	141803217	NM_008683.3	Nedd8	NP_032709.1	ILMN_1256971	005890164	S	345	ACTTGGTTCCGTTTACCTCCTTGCCCTGCCAATCATAATGTGGCATCACA	14	-	56281311-56281360	14qC3	Mus musculus neural precursor cell expressed, developmentally down-regulated gene 8 (Nedd8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Covalent attachment of the ubiquitin-like protein NEDD8 (RUB1) to another protein [goid 45116] [evidence ISA]; Covalent attachment of the ubiquitin-like protein NEDD8 (RUB1) to another protein [goid 45116] [evidence ISS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rub1	Rub1
Mus musculus	RefSeq	ILMN_210629	ILMN_316134	1700126L10RIK	XR_033202.1	XR_033202.1		73603	149250428	XR_033202.1	1700126L10Rik		ILMN_2607572	006660209	S	1333	GCCCCGAGTTGTCTTCTTAAAGACCTACCATCACAGCACTACCATGGGGA				2qH3	PREDICTED: Mus musculus RIKEN cDNA 1700126L10 gene (1700126L10Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_216073	ILMN_241096	RYK	NM_001042607.1	NM_001042607.1		20187	110681701	NM_001042607.1	Ryk	NP_001036072.1	ILMN_2667020	006380672	S	2006	GATCACCCAGCCTTAGCAGTGCTTCCAAACCTCAGCTTTTAACGATGACG	9	+	102809385-102809434	9qF1	Mus musculus receptor-like tyrosine kinase (Ryk), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with Wnt-protein, a secreted growth factor involved in signaling [goid 17147] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Combining with a member of the Wnt family of signaling molecules to initiate a change in cell activity [goid 42813] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ERK-3; AW536699; Vik	ERK-3; AW536699; Vik
Mus musculus	RefSeq	ILMN_241096	ILMN_241096	RYK	NM_001042607.1	NM_001042607.1		20187	110681701	NM_001042607.1	Ryk	NP_001036072.1	ILMN_3159826	001340681	A	1932	ACTCAGAAGAAAGTGCCTGTCTGTCACGGATGCCCCTCGTGCAGCGCAGT	9	+	102809311-102809360	9qF1	Mus musculus receptor-like tyrosine kinase (Ryk), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with Wnt-protein, a secreted growth factor involved in signaling [goid 17147] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Combining with a member of the Wnt family of signaling molecules to initiate a change in cell activity [goid 42813] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ERK-3; AW536699; Vik	ERK-3; AW536699; Vik
Mus musculus	Riken	ILMN_202893	ILMN_202893	9030414G15RIK	ri|9030414G15|PX00025G14|AK033508|2347					AK033508	9030414G15Rik		ILMN_1257033	001090537	S	2104	CTGTTCCTGGAAACTGAGTAAGTGGGCCATTCCAGGGACTCCCCAGTTGG										
Mus musculus	MEEBO	ILMN_214060	ILMN_214060	PAFAH1B2	scl0018475.1_82	NM_008775.2			40254623	NM_008775.2	Pafah1b2		ILMN_2643830	001300390	S	1024	ACTTTTTAGTTGTTTATGACACATTTGTAGAATTATCACTTTTTCCTAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211427	ILMN_211427	NR0B1	NM_007430.4	NM_007430.4		11614	145966798	NM_007430.4	Nr0b1	NP_031456.1	ILMN_2615796	001440341	S	1669	TATATCTCTAAGAGTGTGGTACTAGGCTAACAAGCTAATTTCATAAAAAT				XqC1	Mus musculus nuclear receptor subfamily 0, group B, member 1 (Nr0b1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A ribosome bound to mRNA that forms part of a polysome [goid 42788] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; The specification of male sex of an individual organism [goid 30238] [evidence IGI]; The specification of male sex of an individual organism [goid 30238] [evidence IMP]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IGI]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis [goid 33327] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized structural and/or functional features of a Sertoli cell. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60008] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ahc; AHX; Dax1; DAX-1; Ahch	Ahc; AHX; Dax1; DAX-1; Ahch
Mus musculus	RefSeq	ILMN_223659	ILMN_223659	TMEM54	NM_025452.2	NM_025452.2		66260	20270298	NM_025452.2	Tmem54	NP_079728.2	ILMN_2919393	002690035	S	709	CAGAGCCCCTGGATGCTCATGACCTATTGAGCTGCGCCAGTTCTTGCAGC	4	+	128613641-128613690	4qD2.2	Mus musculus transmembrane protein 54 (Tmem54), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI507302; 1810017F10Rik	AI507302; 1810017F10Rik
Mus musculus	RefSeq	ILMN_198220	ILMN_327049	LOC100048437	XM_001480365.1	XM_001480365.1		100048437	149269490	XM_001480365.1	LOC100048437	XP_001480415.1	ILMN_1249182	000130576	S	1204	TGCCATCCCAGAAGAGAGTGGGGATGAAGATGAGGAGGACCCTGACAAAC					PREDICTED: Mus musculus similar to histone deacetylase, transcript variant 1 (LOC100048437), mRNA.					
Mus musculus	RefSeq	ILMN_196741	ILMN_319470	LOC100045864	XR_032055.1	XR_032055.1		100045864	149275067	XR_032055.1	LOC100045864		ILMN_1248382	004060735	S	1638	AATTTGAATGTGGGTGGCTGGAGAGATGGCTCAGCGCTGACTGCTCTTCC					PREDICTED: Mus musculus similar to HLA-G protein (LOC100045864), misc RNA.					
Mus musculus	RefSeq	ILMN_232119	ILMN_232119	FBXO4	NM_134099.1	NM_134099.1		106052	33859770	NM_134099.1	Fbxo4	NP_598860.1	ILMN_2869312	005910300	S	1382	GAGGAGGCCTTTCTACTGGACAGCTACCACAGCTGGGTTTCTGACACTTT	15	-	3915578-3915627	15qA1	Mus musculus F-box protein 4 (Fbxo4), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		AW494535; 1700096C12Rik; AI851261	AW494535; 1700096C12Rik; AI851261
Mus musculus	Riken	ILMN_205420	ILMN_205420	1700021I09RIK	ri|E230013K19|PX00210A07|AK054034|638					AK054034	1700021I09Rik		ILMN_1237531	000010136	S	420	TTTAGAAGCCCTGGTCCTCCGTGGGCTCTTACTACAACGTGGCACAGGCC										
Mus musculus	RefSeq	ILMN_211402	ILMN_211402	OLFR1233	NM_146972.1	NM_146972.1		258974	22128986	NM_146972.1	Olfr1233	NP_667183.1	ILMN_2615495	003440259	S	754	TATATGCGGCCAGTAACAACTTTTCATACAGATAAAGCCATAGCAGTGTT	2	-	89179654-89179703	2qE1	Mus musculus olfactory receptor 1233 (Olfr1233), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR238-1	MOR238-1
Mus musculus	MEEBO	ILMN_184589	ILMN_184589	2310022K11RIK	scl0070282.1_301				51706525	XM_488966	2310022K11Rik		ILMN_1220776	006940551	S	20	TAAATGTTCAATGATTCCTATGATGTCGTTAACAACCAGTCAGGGCTCCA										
Mus musculus	MEEBO	ILMN_189765	ILMN_189765	RNU65	scl00104367.1_1						Rnu65		ILMN_1233252	004920634	S	20	CTGGTGCAATCCAGTGGTGAGCCGACAGTGAGCCCCAGCTTTTAGGAAAC										
Mus musculus	Riken	ILMN_202136	ILMN_202136	GPM6B	ri|2900046P21|ZX00069A01|AK013660|894					AK013660	Gpm6b		ILMN_1238225	002450019	S	586	GTCTATGAGGGATGGGGAGGTAGCATAGGTGATAGAGTGCTTGCCTCCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_203960	ILMN_203960	SNTB2	ri|A430092J05|PX00138P22|AK040413|1157					AK040413	Sntb2		ILMN_1248791	007150605	S	1105	AGTATGGGTTGACTCAGTGTTAGGCCAGAGATTTGGCAAACTGGTATGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_205134	ILMN_205134	9430095B17RIK	ri|9430095B17|PX00110P04|AK035162|2597					AK035162	9430095B17Rik		ILMN_1239916	006110192	S	2360	ATATGAGTTCCATGAGAGAAGCAACGACGGACAACCCTGGCTTCCCAAGC										
Mus musculus	RefSeq	ILMN_189905	ILMN_189905	WDR45	NM_172372.1	NM_172372.1		54636	27363471	NM_172372.1	Wdr45	NP_758960.1	ILMN_2836924	006110102	S	1359	CAGCTCGCTTCCACGAGCACTTTTTGTGACTGGAGTGCTAAAGGCCAGAG	X	+	7305118-7305167	XqA1.1	Mus musculus WD repeat domain 45 (Wdr45), mRNA.				JM5; C79260; Wdrx1; Sfc19; DXImx38e	JM5; C79260; Wdrx1; Sfc19; DXImx38e
Mus musculus	MEEBO	ILMN_223984	ILMN_223984	PGM2	scl25240.12_194				31980725	NM_028132	Pgm2		ILMN_1230977	000650564	S	2163	ACGGTTCCTGGTGCCTTCTCTCTGAGTGAGATGTGCTTGCCTTCAGACCT							The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196619	ILMN_196619	DGL1-PENDING	XM_148039.1	XM_148039.1			20891894	XM_148039.1	Dgl1-pending		ILMN_1222841	000020390	S	676	CCACCACGACACTCTTCAGGCACAAAGGTCAATGCAGTCCTGGGCTCTCC										
Mus musculus	MEEBO	ILMN_219330	ILMN_219330	1700019A02RIK	scl16773.9.9_129	XM_129804.2			38049484	XM_129804.2	1700019A02Rik		ILMN_2707328	006550148	S	681	ACTGACATTGGTTTATACTGATAATGTCACTGCTGTAATTTATAAATAAA										
Mus musculus	MEEBO	ILMN_193461	ILMN_193461	PCDHB6	scl52069.1_110				18087780	NM_053131	Pcdhb6		ILMN_2497410	005550156	S	20	ATTGTACATGATGTAGTGTGCTTTCATTTTGTATGAGCCGACATTTGGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216773	ILMN_216773	CD33	NM_021293.1	NM_021293.1		12489	10946589	NM_021293.1	Cd33	NP_067268.1	ILMN_2963320	004040196	S	1447	ATTCTGACACAGGGTATGGTGGTTTGAATAAAAATGGCCCCCATAGGCAC	7	-	50783747-50783796	7qB4	Mus musculus CD33 antigen (Cd33), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	gp67; Siglec-3	gp67; Siglec-3
Mus musculus	RefSeq	ILMN_261774	ILMN_261774	F13B	NM_031164.1	NM_031164.1		14060	13624320	NM_031164.1	F13b	NP_112441.1	ILMN_2896248	000620059	S	1905	CTGGGTCTGTACTTCGGGTGCAGTGTGACAGGGGAAGGCTGAAATACCCT	1	+	141419064-141419113	1qF	Mus musculus coagulation factor XIII, beta subunit (F13b), mRNA.		The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]		Cf-13b; Cf13b	Cf-13b; Cf13b
Mus musculus	RefSeq	ILMN_185330	ILMN_225016	SBNO1	NM_001081203.1	NM_001081203.1		243272	124487086	NM_001081203.1	Sbno1	NP_001074672.1	ILMN_2426140	004610014	S	239	AGCAGCAGTTCCTGTCAAACAAGAGCCAGAGCCGATGTCCACTCCCGCAC	5	-	124863207-124863256	5qF	Mus musculus sno, strawberry notch homolog 1 (Drosophila) (Sbno1), mRNA.				MGC28589; 9330180L10Rik; AW557836; sno; Sbno; AI849128; BC021875	MGC28589; 9330180L10Rik; AW557836; sno; Sbno; AI849128; BC021875
Mus musculus	RefSeq	ILMN_225016	ILMN_225016	SBNO1	NM_001081203.1	NM_001081203.1		243272	124487086	NM_001081203.1	Sbno1	NP_001074672.1	ILMN_3154129	004900152	A	4208	TCACCCACAGAGCATCACCAACTTGAGCAACCTGTGAGGAGCAGCGGCGT	5	-	124824524-124824537:124824538-124824573	5qF	Mus musculus sno, strawberry notch homolog 1 (Drosophila) (Sbno1), mRNA.				MGC28589; 9330180L10Rik; AW557836; sno; Sbno; AI849128; BC021875	MGC28589; 9330180L10Rik; AW557836; sno; Sbno; AI849128; BC021875
Mus musculus	RefSeq	ILMN_210465	ILMN_210465	TK1	NM_009387.1	NM_009387.1		21877	6678356	NM_009387.1	Tk1	NP_033413.1	ILMN_2605890	007400142	S	935	GGGCCTGCCATTCCTAATGGACAATGTACCTTGAACAGGCTGCCACTCGC	11	-	117677156-117677205	11qE2	Mus musculus thymidine kinase 1 (Tk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + thymidine = ADP + thymidine 5'-phosphate [goid 4797] [evidence IDA]	D530002A18Rik; Tk1a; Tk-1; Tk1b	D530002A18Rik; Tk1a; Tk-1; Tk1b
Mus musculus	RefSeq	ILMN_210465	ILMN_210465	TK1	NM_009387.1	NM_009387.1		21877	6678356	NM_009387.1	Tk1	NP_033413.1	ILMN_2893926	003450010	S	917	AGAGAGCAGGGGGAGCGCGGGCCTGCCATTCCTAATGGACAATGTACCTT	11	-	117677174-117677223	11qE2	Mus musculus thymidine kinase 1 (Tk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + thymidine = ADP + thymidine 5'-phosphate [goid 4797] [evidence IDA]	D530002A18Rik; Tk1a; Tk-1; Tk1b	D530002A18Rik; Tk1a; Tk-1; Tk1b
Mus musculus	RefSeq	ILMN_210465	ILMN_210465	TK1	NM_009387.1	NM_009387.1		21877	6678356	NM_009387.1	Tk1	NP_033413.1	ILMN_2611857	001450707	S	69	TCTTCGTCCCGCCCCCTTTTGAGTTCGCGGGCAAATGCGAGCAGTAAGTC	11	-	117687149-117687198	11qE2	Mus musculus thymidine kinase 1 (Tk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + thymidine = ADP + thymidine 5'-phosphate [goid 4797] [evidence IDA]	D530002A18Rik; Tk1a; Tk-1; Tk1b	D530002A18Rik; Tk1a; Tk-1; Tk1b
Mus musculus	RefSeq	ILMN_210465	ILMN_210465	TK1	NM_009387.1	NM_009387.1		21877	6678356	NM_009387.1	Tk1	NP_033413.1	ILMN_2611858	005090484	S	72	TTCGTCCCGCCCCCTTTTGAGTTCGCGGGCAAATGCGAGCAGTAAGTCGA	11	-	117687146-117687195	11qE2	Mus musculus thymidine kinase 1 (Tk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + thymidine = ADP + thymidine 5'-phosphate [goid 4797] [evidence IDA]	D530002A18Rik; Tk1a; Tk-1; Tk1b	D530002A18Rik; Tk1a; Tk-1; Tk1b
Mus musculus	RefSeq	ILMN_209855	ILMN_313169	OTTMUSG00000017866	NM_001085544.1	NM_001085544.1		628923	147903748	NM_001085544.1	OTTMUSG00000017866	NP_001079013.1	ILMN_1252877	006350468	S	284	GGCAAGTGTCAGACACACACTGTTGTGGGAGAAAAACAAGAAGATGGGCG				XqA7.3	Mus musculus predicted gene, OTTMUSG00000017866 (OTTMUSG00000017866), mRNA.					
Mus musculus	RefSeq	ILMN_252470	ILMN_252470	LOC628416	NM_001037931.1	NM_001037931.1		628416	85702331	NM_001037931.1	LOC628416	NP_001033020.1	ILMN_2839710	005570494	S	1752	AAGCGTCTCCCAGAGAATCCAGAGGAACAGCGAACACTTCCGACAGGATC	14	-	66259216-66259265	14qD1	Mus musculus hypothetical protein LOC628416 (LOC628416), mRNA.					
Mus musculus	RefSeq	ILMN_190669	ILMN_256519	DAPK1	NM_134062.1	NM_134062.1		69635	114205407	NM_134062.1	Dapk1	NP_598823.1	ILMN_1220331	004670288	S	5061	GGGGGTGACCAAGATTGTGATTGAATTCTAAATCAGTGTGAGGGAAAGTG	13	+	60864309-60864358	13qB2	Mus musculus death associated protein kinase 1 (Dapk1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]	AI642003; 2310039H24Rik; DAP-Kinase; 2810425C21Rik; D13Ucla1	AI642003; 2310039H24Rik; DAP-Kinase; 2810425C21Rik; D13Ucla1
Mus musculus	RefSeq	ILMN_190669	ILMN_256519	DAPK1	NM_134062.1	NM_134062.1		69635	114205407	NM_134062.1	Dapk1	NP_598823.1	ILMN_2737982	005690102	S	4797	AAAAGATCCGTGTGAACACGCACATGAGACCTACAGACGGTCACGCTCCC	13	+	60864045-60864094	13qB2	Mus musculus death associated protein kinase 1 (Dapk1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]	AI642003; 2310039H24Rik; DAP-Kinase; 2810425C21Rik; D13Ucla1	AI642003; 2310039H24Rik; DAP-Kinase; 2810425C21Rik; D13Ucla1
Mus musculus	RefSeq	ILMN_256519	ILMN_256519	DAPK1	NM_134062.1	NM_134062.1		69635	114205407	NM_134062.1	Dapk1	NP_598823.1	ILMN_3155915	004220731	A	4806	GTGTGAACACGCACATGAGACCTACAGACGGTCACGCTCCCTCACTCCCT	13	+	60864054-60864103	13qB2	Mus musculus death associated protein kinase 1 (Dapk1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]	AI642003; 2310039H24Rik; DAP-Kinase; 2810425C21Rik; D13Ucla1	AI642003; 2310039H24Rik; DAP-Kinase; 2810425C21Rik; D13Ucla1
Mus musculus	RefSeq	ILMN_212728	ILMN_212728	E130012A19RIK	NM_175332.3	NM_175332.3		103551	111185891	NM_175332.3	E130012A19Rik	NP_780541.2	ILMN_2963091	000540398	S	2150	GCCGGAAGGTTGGATGAAGGAAAGAGACCTCCAGCCTCAGCGTTCTCCTC	11	-	97488831-97488880	11qD	Mus musculus RIKEN cDNA E130012A19 gene (E130012A19Rik), mRNA.				AW539173; AI413509; AA409164; RP23-94N18.3	AW539173; AI413509; AA409164; RP23-94N18.3
Mus musculus	MEEBO	ILMN_221722	ILMN_221722	SLC1A6	scl38721.10.1_139	NM_009200.1			6678002	NM_009200.1	Slc1a6		ILMN_2739477	006180332	S	1828	AAGGGGGCATCAAGGGGTCGGGGAGGTAATGAGAGCGTCATGTGAGAAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid [goid 5313] [evidence IMP]		
Mus musculus	RefSeq	ILMN_219442	ILMN_313204	LOC100048251	XR_034443.1	XR_034443.1		100048251	149259646	XR_034443.1	LOC100048251		ILMN_2708949	002060156	S	1616	CAAAGGTTCACAAATGGTAGGCAAGTACCCTGAATCACACCCCAGCTCTG					PREDICTED: Mus musculus hypothetical protein LOC100048251 (LOC100048251), misc RNA.					
Mus musculus	RefSeq	ILMN_197711	ILMN_310621	EG632248	XM_001473902.1	XM_001473902.1		632248	149266875	XM_001473902.1	EG632248	XP_001473952.1	ILMN_1260362	003850008	S	248	CGATGCTGATGCTGTCCGGGAACTAGATGGAAGAGCACTGTGTGGCTGCT				15qD1	PREDICTED: Mus musculus predicted gene, EG632248 (EG632248), mRNA.					
Mus musculus	RefSeq	ILMN_222328	ILMN_222328	RAI1	NM_009021.2	NM_009021.2		19377	83649746	NM_009021.2	Rai1	NP_033047.2	ILMN_3147230	001300546	A	6934	GTCGGGGCCAAAGTGATGCCCCTTCCCCGAGCAACTACCACCATCACCAC	11	+	60012283-60012332	11qB1.3-qB2	Mus musculus retinoic acid induced 1 (Rai1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gt1	Gt1
Mus musculus	RefSeq	ILMN_222328	ILMN_222328	RAI1	NM_009021.2	NM_009021.2		19377	83649746	NM_009021.2	Rai1	NP_033047.2	ILMN_3068858	000870731	I	29	TTCCTGTGTGGAGGGGATCGCATTTCTCTCGGGCTCCCGCGGGCATCAGG	11	+	59918543-59918592	11qB1.3-qB2	Mus musculus retinoic acid induced 1 (Rai1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gt1	Gt1
Mus musculus	RefSeq	ILMN_209986	ILMN_209986	GPS1	NM_145370.1	NM_145370.1		209318	21703741	NM_145370.1	Gps1	NP_663345.1	ILMN_2632714	002000162	S	129	ACAGCAGGTCCGACTTGCGGCCCGGCACGGCGGGCGACTACAGCCTGAGC	11	+	120645957-120646006	11qE2	Mus musculus G protein pathway suppressor 1 (Gps1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC7191; R75577; MGC118012; COPS1; Csn1	MGC7191; R75577; MGC118012; COPS1; Csn1
Mus musculus	RefSeq	ILMN_209986	ILMN_209986	GPS1	NM_145370.1	NM_145370.1		209318	21703741	NM_145370.1	Gps1	NP_663345.1	ILMN_1254788	005050681	S	37	TCGCAGAGAGGCGCGTCAGGCCAACATGCGGGGCAGCCCGGCGCCCAGCT	11	+	120645865-120645914	11qE2	Mus musculus G protein pathway suppressor 1 (Gps1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC7191; R75577; MGC118012; COPS1; Csn1	MGC7191; R75577; MGC118012; COPS1; Csn1
Mus musculus	RefSeq	ILMN_209986	ILMN_209986	GPS1	NM_145370.1	NM_145370.1		209318	21703741	NM_145370.1	Gps1	NP_663345.1	ILMN_2625982	005490376	S	14	ACGCTTTCCGTGCGGTGCCGGCCTCGCAGAGAGGCGCGTCAGGCCAACAT	11	+	120645842-120645891	11qE2	Mus musculus G protein pathway suppressor 1 (Gps1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC7191; R75577; MGC118012; COPS1; Csn1	MGC7191; R75577; MGC118012; COPS1; Csn1
Mus musculus	RefSeq	ILMN_209986	ILMN_209986	GPS1	NM_145370.1	NM_145370.1		209318	21703741	NM_145370.1	Gps1	NP_663345.1	ILMN_2601090	000620682	S	1644	AGGCATTCCTGTGACCGTCAGACCATAGTCTGCACACCTACTCTGCCTGT	11	+	120650060-120650109	11qE2	Mus musculus G protein pathway suppressor 1 (Gps1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC7191; R75577; MGC118012; COPS1; Csn1	MGC7191; R75577; MGC118012; COPS1; Csn1
Mus musculus	RefSeq	ILMN_216186	ILMN_216186	CRHR1	NM_007762.4	NM_007762.4		12921	145966876	NM_007762.4	Crhr1	NP_031788.1	ILMN_2714849	001510291	S	460	CGGCAGCTGGGCAGCCCGTGTGAATTATTCTGAGTGCCAGGAGATTCTCA				11qE1	Mus musculus corticotropin releasing hormone receptor 1 (Crhr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the corticotrophin-releasing factor family of ligands, including the urocortins, to initiate a change in cell activity [goid 15056] [evidence IMP]	Crhr; MGC124240; CRFR1; MGC124237	Crhr; MGC124240; CRFR1; MGC124237
Mus musculus	RefSeq	ILMN_216186	ILMN_216186	CRHR1	NM_007762.4	NM_007762.4		12921	145966876	NM_007762.4	Crhr1	NP_031788.1	ILMN_2668221	006900114	S	1165	CACCTACATGTTGTTCTTCGTCAACCCTGGGGAGGACGAGGTCTCCAGGG				11qE1	Mus musculus corticotropin releasing hormone receptor 1 (Crhr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the corticotrophin-releasing factor family of ligands, including the urocortins, to initiate a change in cell activity [goid 15056] [evidence IMP]	Crhr; MGC124240; CRFR1; MGC124237	Crhr; MGC124240; CRFR1; MGC124237
Mus musculus	RefSeq	ILMN_216186	ILMN_216186	CRHR1	NM_007762.4	NM_007762.4		12921	145966876	NM_007762.4	Crhr1	NP_031788.1	ILMN_2744710	003290307	S	1856	GGTCCAGTCAGGAGACCGGGAGATAGCGGTAGAAATCTGGGAACGTCATC				11qE1	Mus musculus corticotropin releasing hormone receptor 1 (Crhr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the corticotrophin-releasing factor family of ligands, including the urocortins, to initiate a change in cell activity [goid 15056] [evidence IMP]	Crhr; MGC124240; CRFR1; MGC124237	Crhr; MGC124240; CRFR1; MGC124237
Mus musculus	RefSeq	ILMN_212229	ILMN_212229	ST14	NM_011176.4	NM_011176.4		19143	118130245	NM_011176.4	St14	NP_035306.2	ILMN_2624209	007150367	S	2497	CCTGTGAGGACCTCATGCCGCAGCAGATCACCCCACGAATGATGTGTGTG	9	-	30898019-30898068	9qA4	Mus musculus suppression of tumorigenicity 14 (colon carcinoma) (St14), mRNA.	Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IDA]	MT-SP1; matriptase; Epithin; Prss14	MT-SP1; matriptase; Epithin; Prss14
Mus musculus	RefSeq	ILMN_212229	ILMN_212229	ST14	NM_011176.4	NM_011176.4		19143	118130245	NM_011176.4	St14	NP_035306.2	ILMN_1255342	002320661	S	3089	TTCAGGAAGCGCCAGCCCTAGGAACCCCAGAAAAGAGTGGTACCTAAGGC	9	-	30897053-30897102	9qA4	Mus musculus suppression of tumorigenicity 14 (colon carcinoma) (St14), mRNA.	Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IDA]	MT-SP1; matriptase; Epithin; Prss14	MT-SP1; matriptase; Epithin; Prss14
Mus musculus	Riken	ILMN_204033	ILMN_204033	A730012K24RIK	ri|A730012K24|PX00149C13|AK042637|1027					AK042637	A730012K24Rik		ILMN_1237819	005720008	S	787	CCCGGAAGTGGCCAAGGAAGCGCCTGTGAGAGAAATTATCCTTTCGGACC										
Mus musculus	RefSeq	ILMN_221670	ILMN_236640	A730027B03RIK	XR_005173.1	XR_005173.1		319301	94377694	XR_005173.1	A730027B03Rik		ILMN_2738803	000520324	S	3711	GAATAGACCAAATAACTAATGACAAAATGTAGCAAGAGAAAAATGAAGAA				11qA3.2	PREDICTED: Mus musculus RIKEN cDNA A730027B03 gene (A730027B03Rik), misc RNA.					
Mus musculus	Riken	ILMN_203756	ILMN_203756	A130029N12RIK	ri|A130029N12|PX00121N04|AK037617|2767					AK037617	A130029N12Rik		ILMN_1241784	002760392	S	2493	ACTAAGTGCCATAAAGAAAGAGACAGGGAGTGGTCTGGGAGGGGCGGGGC										
Mus musculus	RefSeq	ILMN_193690	ILMN_239927	TRIM46	NM_001039466.1	NM_001039466.1		360213	87080828	NM_001039466.1	Trim46	NP_001034555.1	ILMN_2521395	004290475	S	2338	ACTGGATATGACTAACAACTCTGCCCTTGCCTTGCCAAGCCCCCCTACCC	3	-	89038432-89038481	3qF1	Mus musculus tripartite motif-containing 46 (Trim46), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC90834; AI385631	MGC90834; AI385631
Mus musculus	RefSeq	ILMN_199080	ILMN_199080	EG216394	XM_137324.2	XM_137324.2		216394	149261091	XM_137324.2	EG216394	XP_137324.2	ILMN_1220884	004390243	S	1130	TCCTGGTGCCGGTAAACCTGAATATGCACTGGAGCCTTGTGGTGACCTAC	10	+	121503717-121503766	10qD2	PREDICTED: Mus musculus predicted gene, EG216394 (EG216394), mRNA.					
Mus musculus	RefSeq	ILMN_211358	ILMN_245530	BAZ2A	NM_054078.2	NM_054078.2		116848	114205434	NM_054078.2	Baz2a	NP_473419.2	ILMN_2615041	001940192	S	80	ACGACCAAGGTCCTGCAGATGACACCAGGAAAGCAGTGATCCAGGCAGGA	10	+	127533506-127533555	10qD3	Mus musculus bromodomain adjacent to zinc finger domain, 2A (Baz2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Walp3; mKIAA0314; Tip5; C78388; C030005G16Rik; AA415431	Walp3; mKIAA0314; Tip5; C78388; C030005G16Rik; AA415431
Mus musculus	RefSeq	ILMN_185607	ILMN_245530	BAZ2A	NM_054078.2	NM_054078.2		116848	114205434	NM_054078.2	Baz2a	NP_473419.2	ILMN_2652385	001770546	S	5562	CCTGTGAACCCTCGCTTGGTGAGTGGATACCGACGTGTCATCAAGAACCC	10	+	127563434-127563483	10qD3	Mus musculus bromodomain adjacent to zinc finger domain, 2A (Baz2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Walp3; mKIAA0314; Tip5; C78388; C030005G16Rik; AA415431	Walp3; mKIAA0314; Tip5; C78388; C030005G16Rik; AA415431
Mus musculus	RefSeq	ILMN_195093	ILMN_251105	TMCC1	XM_917443.2	XM_917443.2		330401	94377837	XM_917443.2	Tmcc1	XP_922536.1	ILMN_2712490	002470164	S	2705	CCTAACTTTTAAGCAAAATCCCTTGGCCGCACTTTTAAGGTTTGGTTGTT				6qE3	PREDICTED: Mus musculus transmembrane and coiled coil domains 1, transcript variant 8 (Tmcc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_221984	ILMN_221984	NUDT2	NM_025539.2	NM_025539.2		66401	86198334	NM_025539.2	Nudt2	NP_079815.2	ILMN_1259148	007100431	S	342	ACAATGTAGAGATCCGCCTCTCCCAGGAGCATCAAGCCTACCGCTGGCTG	4	+	41427453-41427502	4qA5	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 2 (Nudt2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of P(1),P(4)-bis(5'-nucleosyl)tetraphosphate into two nucleotides [goid 8796] [evidence IEA]; Catalysis of the reaction: P(1),P(4)-bis(5'-nucleosyl)tetraphosphate + H2O = NTP + NMP. Acts on bis(5'-guanosyl)-, bis(5'-xanthosyl)-, bis(5'-adenosyl)- and bis(5'-uridyl)-tetraphosphate [goid 4081] [evidence ISS]	APAH1; AA939917; 2310051L06Rik	APAH1; AA939917; 2310051L06Rik
Mus musculus	MEEBO	ILMN_217057	ILMN_217057	ETSRP71	scl31515.6.1_57	NM_007959.1			6679698	NM_007959.1	Etsrp71		ILMN_2678641	002120500	S	893	GTCTACGTTATTATTACCGCCGCGACATCGTGCTCAAGAGTGGTGGGCGC										
Mus musculus	RefSeq	ILMN_196143	ILMN_196143	ZP2	NM_011775.6	NM_011775.6		22787	146134394	NM_011775.6	Zp2	NP_035905.1	ILMN_1216358	001450129	S	2122	GGCTTCATCTGTTACCTGTATAAGAAAAGAACTATAAGGTTCAATCACTG				7qF2	Mus musculus zona pellucida glycoprotein 2 (Zp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IDA]; The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Zp-2	Zp-2
Mus musculus	RefSeq	ILMN_188216	ILMN_231310	DUSP4	NM_176933.4	NM_176933.4		319520	142364920	NM_176933.4	Dusp4	NP_795907.1	ILMN_2689731	000010176	S	2203	TGGGTGCCGTTCAGATTTTCCTGCCGTGAATCATTTGGTAAGGCCAGATC	8	+	35882724-35882773	8qA4	Mus musculus dual specificity phosphatase 4 (Dusp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	AI844617; E130306H24Rik; BB104621; 2700078F24Rik	AI844617; E130306H24Rik; BB104621; 2700078F24Rik
Mus musculus	RefSeq	ILMN_188216	ILMN_231310	DUSP4	NM_176933.4	NM_176933.4		319520	142364920	NM_176933.4	Dusp4	NP_795907.1	ILMN_2608995	003400259	S	403	AAGAGGTGCGTGCCCGCCTGCGCTCTGGCCTCTACTCGGCTGTCATCGTC	8	+	35871066-35871115	8qA4	Mus musculus dual specificity phosphatase 4 (Dusp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	AI844617; E130306H24Rik; BB104621; 2700078F24Rik	AI844617; E130306H24Rik; BB104621; 2700078F24Rik
Mus musculus	Riken	ILMN_204885	ILMN_204885	A530020O12RIK	ri|A530020O12|PX00140F12|AK079946|1192					AK079946	A530020O12Rik		ILMN_2568356	003710138	S	307	AACTGGCTGTGGCCGATGCTGCTGATGCCCCGTTGTCTAATCATGCCGCT										
Mus musculus	RefSeq	ILMN_261045	ILMN_261045	CBX5	NM_001076789.1	NM_001076789.1		12419	116008460	NM_001076789.1	Cbx5	NP_001070257.1	ILMN_3055904	003890519	I	21	TGGTGCCGCTTTACCACAGAGGAACCGTGCAGGCCTTAGCGTGAGTGATC	15	-	103070177-103070226	15qF3	Mus musculus chromobox homolog 5 (Drosophila HP1a) (Cbx5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure [goid 10369] [evidence IDA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	C75991; 2610029O15Rik; Hp1a; HP1	C75991; 2610029O15Rik; Hp1a; HP1
Mus musculus	RefSeq	ILMN_222000	ILMN_222000	CD86	NM_019388.2	NM_019388.2		12524	31542363	NM_019388.2	Cd86	NP_062261.2	ILMN_1217041	000060681	S	2381	CCGCTGGCAGGGCTCATGCTTGTAATGTGTCCATCTTGATTCACCCTGTG	16	-	36604037-36604086	16qB3	Mus musculus CD86 antigen (Cd86), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	B7-2; Ly58; TS/A-2; B70; CLS1; B7.2; B7; MB7-2; Ly-58; MB7; Cd28l2	B7-2; Ly58; TS/A-2; B70; CLS1; B7.2; B7; MB7-2; Ly-58; MB7; Cd28l2
Mus musculus	RefSeq	ILMN_222000	ILMN_222000	CD86	NM_019388.2	NM_019388.2		12524	31542363	NM_019388.2	Cd86	NP_062261.2	ILMN_1216386	001570537	S	30	GCACGGACTTGAACAACCAGACTCCTGTAGACGTGTTCCAGAACTTACGG	16	-	36666058-36666107	16qB3	Mus musculus CD86 antigen (Cd86), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	B7-2; Ly58; TS/A-2; B70; CLS1; B7.2; B7; MB7-2; Ly-58; MB7; Cd28l2	B7-2; Ly58; TS/A-2; B70; CLS1; B7.2; B7; MB7-2; Ly-58; MB7; Cd28l2
Mus musculus	RefSeq	ILMN_222000	ILMN_222000	CD86	NM_019388.2	NM_019388.2		12524	31542363	NM_019388.2	Cd86	NP_062261.2	ILMN_2743244	002850010	S	2383	CGCTGGCAGGGCTCATGCTTGTAATGTGTCCATCTTGATTCACCCTGTGC	16	-	36604035-36604084	16qB3	Mus musculus CD86 antigen (Cd86), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	B7-2; Ly58; TS/A-2; B70; CLS1; B7.2; B7; MB7-2; Ly-58; MB7; Cd28l2	B7-2; Ly58; TS/A-2; B70; CLS1; B7.2; B7; MB7-2; Ly-58; MB7; Cd28l2
Mus musculus	Riken	ILMN_202811	ILMN_202811	6720488N08RIK	ri|6720488N08|PX00060B07|AK078464|1959					AK078464	6720488N08Rik		ILMN_1255281	007040605	S	1242	CCTCGCAGAGGAAGGCAGCTTCTTTGTTTTTTTGTTTGTGAGAGCATCGG										
Mus musculus	RefSeq	ILMN_215513	ILMN_215513	ANKRA2	NM_023472.1	NM_023472.1		68558	12963688	NM_023472.1	Ankra2	NP_075961.1	ILMN_2660477	004780189	S	1566	GTAGCACAATTTGACACTTTAAGGAAACTCCAACTTGTTTGTCTTTACTC	13	+	99043684-99043733	13qD1	Mus musculus ankyrin repeat, family A (RFXANK-like), 2 (Ankra2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU023827; MGC90650; AI450635; Ankra; 1110004M18Rik	AU023827; MGC90650; AI450635; Ankra; 1110004M18Rik
Mus musculus	Riken	ILMN_205211	ILMN_205211	D430018E21RIK	ri|D430018E21|PX00194I03|AK052427|2334					AK052427	D430018E21Rik		ILMN_2570841	000540482	S	2190	CTGCAGCCATCTTGTCGAGGAATTCACCAAGGGGATCCAGGCTTTGTTTC										
Mus musculus	MEEBO	ILMN_193058	ILMN_193058	4833422F24RIK	scl18331.3_2				21312817	NM_029021	4833422F24Rik		ILMN_2493715	004260341	S	6	CGTCCCTGTGACTGTGGCTCCGCTGGATTCTTTGGCATCCGTGGTACAGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223314	ILMN_223314	MRPS23	NM_024174.5	NM_024174.5		64656	118130310	NM_024174.5	Mrps23	NP_077136.2	ILMN_2909068	002570451	S	997	GCAGTAAGACCGAGTGCCTGTTTGATGTGGACGAAGATCACACCCAGTCC	11	+	88024704-88024753	11qC	Mus musculus mitochondrial ribosomal protein S23 (Mrps23), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]		The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	D11Bwg1153e; Rpms23; 2310047I09Rik	D11Bwg1153e; Rpms23; 2310047I09Rik
Mus musculus	RefSeq	ILMN_240135	ILMN_240135	ZBTB40	NM_198248.1	NM_198248.1		230848	38016186	NM_198248.1	Zbtb40	NP_937891.1	ILMN_2910194	001980598	S	6150	TTTGTGTATTTAAGCAACGGGGCCCCAGTCTTCCCTAAGGCTCCTGACCC	4	-	136536639-136536688	4qD3	Mus musculus zinc finger and BTB domain containing 40 (Zbtb40), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C230087D24; BC059177; mKIAA0478; MGC62412; RP23-95O23.1; Gm571	C230087D24; BC059177; mKIAA0478; MGC62412; RP23-95O23.1; Gm571
Mus musculus	RefSeq	ILMN_196491	ILMN_196491	2410003K15RIK	XM_132537.3	XM_132537.3			38084253	XM_132537.3	2410003K15Rik		ILMN_1241506	004040184	S	356	GAAGCGATCCGTATGTCAAGATCGAGGGGAAGGACGCTGACGACTGGCTG										
Mus musculus	RefSeq	ILMN_218873	ILMN_231136	OLFR172	NM_147001.1	NM_147001.1		259003	22128934	NM_147001.1	Olfr172	NP_667212.1	ILMN_2701289	003890170	S	784	CCAAATTTGCTAGAAGAAGGTGATAAGGACATGCCAGCTGCTATTTTGTT	16	-	58760454-58760503	16qC1.2	Mus musculus olfactory receptor 172 (Olfr172), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR184-2	MOR184-2
Mus musculus	RefSeq	ILMN_224144	ILMN_246723	SYNM	NM_201639.2	NM_201639.2		233335	153791808	NM_201639.2	Synm	NP_964001.2	ILMN_1246310	000770612	S	4122	GGTGGAAGGTTCAGCAGGCACAATCCAGGCCACTCACAATTTCACCTCAG				7qC	Mus musculus synemin, intermediate filament protein (Synm), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence ISO]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence ISO]	AI852401; 4930412K21Rik; MGC56976; Synemin; E130104F11; Syn	AI852401; 4930412K21Rik; MGC56976; Synemin; E130104F11; Syn
Mus musculus	RefSeq	ILMN_211881	ILMN_250733	P2RX7	NM_001038845.2	NM_001038845.2		18439	118130974	NM_001038845.2	P2rx7	NP_001033934.1	ILMN_2620381	007610193	S	640	GAAGACCTGTGAAGTCTCTGCCTGGTGTCCTACTGAGGAGGAGAAAGAAG	5	+	123108757-123108806	5qF	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7 (P2rx7), transcript variant 2, mRNA.	The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IMP]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The formation of a pore complex, a small opening in a membrane that allows the passage of liquids and/or gases [goid 46931] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; The process by which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome [goid 1845] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus [goid 51602] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 alpha from a cell or group of cells [goid 50717] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein in a multicellular organism, occurring at the tissue, organ, or organismal level [goid 44254] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; The directed movement of nicotinamide adenine dinucleotide into, out of, within or between cells; transport may be of either the oxidized form, NAD, or the reduced form, NADH [goid 43132] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51901] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid [goid 14054] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of glutamate [goid 14049] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a prostaglandin from a cell or group of cells [goid 32308] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluid shear stress stimulus. Fluid shear stress is the force acting on an object in a system where the fluid is moving across a solid surface [goid 34405] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production [goid 32731] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic substance stimulus [goid 14070] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; The assembly of a bleb, a cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32060] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; The evagination of a membrane, resulting in formation of a vesicle [goid 6900] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IDA]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the plasma membrane [goid 7009] [evidence IDA]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IDA]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The transfer of a phospholipid from its site of synthesis to the plasma membrane [goid 6649] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IMP]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence ISO]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence IMP]; Interacting selectively with lipopolysaccharide [goid 1530] [evidence IDA]	AI467586	AI467586
Mus musculus	RefSeq	ILMN_194921	ILMN_250733	P2RX7	NM_001038845.2	NM_001038845.2		18439	118130974	NM_001038845.2	P2rx7	NP_001033934.1	ILMN_1248003	001580110	S	1317	CTGTAGTAATACTCGTTCACTGTGCAGGGCTCACAGCACTTACAGTAGGG	5	+	123123790-123123824:123126671-123126685	5qF	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7 (P2rx7), transcript variant 2, mRNA.	The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IMP]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The formation of a pore complex, a small opening in a membrane that allows the passage of liquids and/or gases [goid 46931] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; The process by which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome [goid 1845] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus [goid 51602] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 alpha from a cell or group of cells [goid 50717] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein in a multicellular organism, occurring at the tissue, organ, or organismal level [goid 44254] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; The directed movement of nicotinamide adenine dinucleotide into, out of, within or between cells; transport may be of either the oxidized form, NAD, or the reduced form, NADH [goid 43132] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51901] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid [goid 14054] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of glutamate [goid 14049] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a prostaglandin from a cell or group of cells [goid 32308] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluid shear stress stimulus. Fluid shear stress is the force acting on an object in a system where the fluid is moving across a solid surface [goid 34405] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production [goid 32731] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic substance stimulus [goid 14070] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; The assembly of a bleb, a cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32060] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; The evagination of a membrane, resulting in formation of a vesicle [goid 6900] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IDA]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the plasma membrane [goid 7009] [evidence IDA]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IDA]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The transfer of a phospholipid from its site of synthesis to the plasma membrane [goid 6649] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IMP]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence ISO]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence IMP]; Interacting selectively with lipopolysaccharide [goid 1530] [evidence IDA]	AI467586	AI467586
Mus musculus	Riken	ILMN_206568	ILMN_206568	HSD17B7	ri|6030439M15|PX00057A14|AK077914|1408					AK077914	Hsd17b7		ILMN_2581059	006420440	S	1329	GGGAAGGAGCATACCTGTTTCCCTCGTATGCTGTCTCACGTGGAGGCTTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: 4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NADP+ = 4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-one + NADPH + H+ [goid 253] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: 4-alpha-methyl-5-alpha-cholest-7-en-3-beta-ol + NADP+ = 4-alpha-methyl-5-alpha-cholest-7-en-3-one + NADPH + H+ [goid 50576] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214202	ILMN_214202	1110001A07RIK	NM_025377.3	NM_025377.3		66140	146134983	NM_025377.3	1110001A07Rik	NP_079653.1	ILMN_2645490	002810592	S	1242	CTGTTTTAGACTTTCTATTGGTGTTACAATAATATGTTATCTTTCAGTGT				11qC	Mus musculus RIKEN cDNA 1110001A07 gene (1110001A07Rik), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		C78640; MGC151378	C78640; MGC151378
Mus musculus	RefSeq	ILMN_208830	ILMN_208830	HOXB1	NM_008266.4	NM_008266.4		15407	144227197	NM_008266.4	Hoxb1	NP_032292.2	ILMN_1240198	003170348	S	914	AGTCCGCGTGCACCTCCCCAGAAGCCTCGCCCAGTTCCATCACCTCTTGA	11	+	96228404-96228453	11qD	Mus musculus homeo box B1 (Hoxb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process that contributes to the act of creating the structural organization of the facial nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities [goid 21612] [evidence IMP]; The process whose specific outcome is the progression of the facial nucleus over time, from its formation to the mature structure [goid 21754] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21570] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21571] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Hox-2.9; MGC124123	Hox-2.9; MGC124123
Mus musculus	RefSeq	ILMN_214470	ILMN_312114	2210404O07RIK	NM_001099917.1	NM_001099917.1		72273	153791320	NM_001099917.1	2210404O07Rik	NP_001093387.1	ILMN_2648317	001300014	S	422	CACACACCTCAAGTTGCAGCCACCACCTGAAGCCGGACTGGTGTCATCTG				10qC1	Mus musculus RIKEN cDNA 2210404O07 gene (2210404O07Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_201340	ILMN_201340	LOC382477	XM_356529.1	XM_356529.1			38091554	XM_356529.1	LOC382477		ILMN_2541952	002810026	S	1994	GGACAGATGGGGTGAAATATGAGGGCTTGCCCTGCTGCTTCTATGAAGAG										
Mus musculus	RefSeq	ILMN_220670	ILMN_220670	PHKA2	NM_172783.2	NM_172783.2		110094	141801780	NM_172783.2	Phka2	NP_766371.1	ILMN_2725083	001450390	S	3323	ACAGCAGGGCCAGTGGCTGCGCCGGAGAAGGTTGGATGGGGCCATTAACA	X	+	157024785-157024834	XqF4	Mus musculus phosphorylase kinase alpha 2 (Phka2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	Phk; k; D330034O08; 6330505C01Rik	Phk; k; D330034O08; 6330505C01Rik
Mus musculus	RefSeq	ILMN_220670	ILMN_220670	PHKA2	NM_172783.2	NM_172783.2		110094	141801780	NM_172783.2	Phka2	NP_766371.1	ILMN_2756176	001300328	S	3611	CGGGGGCATCATCCATGTGGACCAGATAGTGCAGCTGGCCAATCAGCTGT	X	+	157028237-157028286	XqF4	Mus musculus phosphorylase kinase alpha 2 (Phka2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	Phk; k; D330034O08; 6330505C01Rik	Phk; k; D330034O08; 6330505C01Rik
Mus musculus	MEEBO	ILMN_216906	ILMN_216906	1700042B14RIK	scl073347.2_69	XM_136155.1			20986045	XM_136155.1	1700042B14Rik		ILMN_2676754	003520722	S	764	TAGACAAGACGCCCCGTTCCAAAATGTAAATCGATACGTTACATAGCCTT										
Mus musculus	RefSeq	ILMN_231406	ILMN_231406	CN716893	NM_001033492.2	NM_001033492.2		434903	111378380	NM_001033492.2	CN716893	NP_001028664.2	ILMN_3113629	007380110	A	1833	GCTCCTCTCGCAAATACAAGGCCAAGTCTAAAGTCCCACTGGTTGACTCC	X	-	83496113-83496162	XqC1	Mus musculus expressed sequence CN716893 (CN716893), mRNA.					
Mus musculus	RefSeq	ILMN_198737	ILMN_231406	CN716893	NM_001033492.2	NM_001033492.2		434903	111378380	NM_001033492.2	CN716893	NP_001028664.2	ILMN_1250353	006420193	S	1391	GGCTCCTCTCGCAAATACAAGGCCAAGTCTAAAGTCCCACTGGTTGACTC	X	-	83496555-83496604	XqC1	Mus musculus expressed sequence CN716893 (CN716893), mRNA.					
Mus musculus	RefSeq	ILMN_231406	ILMN_231406	CN716893	NM_001033492.2	NM_001033492.2		434903	111378380	NM_001033492.2	CN716893	NP_001028664.2	ILMN_3039183	002100240	I	123	GAAAACCAACTGTGGTTGCCAACTTACGCCCACGCGGCTTGAGTCCCCCA	X	-	83500680-83500729	XqC1	Mus musculus expressed sequence CN716893 (CN716893), mRNA.					
Mus musculus	RefSeq	ILMN_254001	ILMN_254001	A430084P05RIK	NM_001045526.1	NM_001045526.1		327957	113865878	NM_001045526.1	A430084P05Rik	NP_001038991.1	ILMN_2847437	001190477	S	475	CCAGCAACCACCGAAACCCAGCACTCTAAAACCACACCTTTTTGGCAAGC				11qB3	Mus musculus RIKEN cDNA A430084P05 gene (A430084P05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222859	ILMN_222859	HOXA4	NM_008265.3	NM_008265.3		15401	142381148	NM_008265.3	Hoxa4	NP_032291.1	ILMN_2755860	006770519	S	1122	TAAGAAAGCACTGGCCATCGACTACCTTTGAGTCAGCCAGACAGCACGTG	6	-	52140042-52140091	6qB3	Mus musculus homeo box A4 (Hoxa4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	MGC130055; Hox-1.4; AV206827	MGC130055; Hox-1.4; AV206827
Mus musculus	Riken	ILMN_207334	ILMN_207334	6030488F16RIK	ri|6030488F16|PX00646D07|AK077972|1692					AK077972	6030488F16Rik		ILMN_1235222	002510400	S	1373	GGCTCAGTGCCACCGAAGTTCAGAGTTTTATTGGTGTGACTGAAGAGGGC										
Mus musculus	MEEBO	ILMN_211773	ILMN_211773	1700020C07RIK	scl075642.1_182	XM_130672.3			38075249	XM_130672.3	1700020C07Rik		ILMN_2619416	000840445	S	586	TGCCAGGCCTGCGGGAAGAGGACCTGATCCGGGCGGCTCAAGCTTTCATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211892	ILMN_320401	PKP4	NM_175464.2	NM_175464.2		227937	147899466	NM_175464.2	Pkp4	NP_780673.2	ILMN_2623844	003310437	S	2411	AATGCGCTCCTGCGAGGGGCTGGTGGACTCGCTGTTGTATGTGATCCACA				2qC1.1	Mus musculus plakophilin 4 (Pkp4), transcript variant 2, mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5031422I09Rik; MGC100358; p0071; Armrp; 9430019K17Rik; MGC105166	5031422I09Rik; MGC100358; p0071; Armrp; 9430019K17Rik; MGC105166
Mus musculus	RefSeq	ILMN_202628	ILMN_320401	PKP4	NM_175464.2	NM_175464.2		227937	147899466	NM_175464.2	Pkp4	NP_780673.2	ILMN_1233340	006940592	S	4396	GCAGCGCCATGCTCATCCCCCTCACAGGACACTTCACTGCCATTTTCTAT				2qC1.1	Mus musculus plakophilin 4 (Pkp4), transcript variant 2, mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5031422I09Rik; MGC100358; p0071; Armrp; 9430019K17Rik; MGC105166	5031422I09Rik; MGC100358; p0071; Armrp; 9430019K17Rik; MGC105166
Mus musculus	RefSeq	ILMN_211892	ILMN_320401	PKP4	NM_175464.2	NM_175464.2		227937	147899466	NM_175464.2	Pkp4	NP_780673.2	ILMN_2620484	004540270	S	460	GGCAGATTGTTGCCAGTCAGCTAGAAAGATGTAGGCTTGGAGCAGAATCG				2qC1.1	Mus musculus plakophilin 4 (Pkp4), transcript variant 2, mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5031422I09Rik; MGC100358; p0071; Armrp; 9430019K17Rik; MGC105166	5031422I09Rik; MGC100358; p0071; Armrp; 9430019K17Rik; MGC105166
Mus musculus	RefSeq	ILMN_212071	ILMN_212071	1700088E04RIK	NM_138581.2	NM_138581.2		27660	75677332	NM_138581.2	1700088E04Rik	NP_613047.1	ILMN_1239196	004640259	S	1071	CTCCTGATGTCACAGCTGGCCTCAGGTGCTCTGTTTTGCCTTTCTGAACC	15	-	78965217-78965266	15qE1	Mus musculus RIKEN cDNA 1700088E04 gene (1700088E04Rik), mRNA.				ESTJ0827E04; MGC106949	ESTJ0827E04; MGC106949
Mus musculus	RefSeq	ILMN_194575	ILMN_194575	V1RF3	NM_134200.1	NM_134200.1		171234	21717722	NM_134200.1	V1rf3	NP_598961.1	ILMN_2507665	003800053	S	481	CGCCTAAGGGTGTATGGTATCTGTTCTACTGTTCATCATAACAAGGTCAG	17	+	21451461-21451510	17qA3.2	Mus musculus vomeronasal 1 receptor, F3 (V1rf3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	Vfrf3	Vfrf3
Mus musculus	RefSeq	ILMN_216424	ILMN_247075	LGR4	NM_172671.2	NM_172671.2		107515	124430558	NM_172671.2	Lgr4	NP_766259.2	ILMN_2670970	003780014	S	3656	TTCAAATTATTTCTGAATTAAGCACAAAATAAAGGACAGCTGTTAATATA	2	+	109853010-109853059	2qE3	Mus musculus leucine-rich repeat-containing G protein-coupled receptor 4 (Lgr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which the anatomical structures of a tube are generated and organized. Morphogenesis pertains to the creation of form. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system [goid 35239] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gpr48; A930009A08Rik; 9130225G07	Gpr48; A930009A08Rik; 9130225G07
Mus musculus	RefSeq	ILMN_208708	ILMN_208708	FBXL8	NM_015821.1	NM_015821.1		50788	7657076	NM_015821.1	Fbxl8	NP_056636.1	ILMN_2588771	000050215	S	1604	GGGGAACTGGGGGTCTATGAAAGCATCCAGACCAATCTCAGGCACCATAA	8	+	107793021-107793070	8qD3	Mus musculus F-box and leucine-rich repeat protein 8 (Fbxl8), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		FBL8	FBL8
Mus musculus	Riken	ILMN_206051	ILMN_206051	D230032H14RIK	ri|D230032H14|PX00189J17|AK051990|2210					AK051990	D230032H14Rik		ILMN_2577186	000010246	S	1749	GTCCCAAGCCCACTCTGCTCAGGCATGCTGCCCAACCTGTAATGTAGACT										
Mus musculus	Riken	ILMN_207073	ILMN_207073	9930028M01RIK	ri|9930028M01|PX00655D18|AK079444|3089					AK079444	9930028M01Rik		ILMN_1232665	003120682	S	2660	CAGTTCCTGGGTGAGTGTGAATTCTGCCTCTGCTGGCACCACTGAGCTGC										
Mus musculus	RefSeq	ILMN_217338	ILMN_217338	GPR45	NM_053107.3	NM_053107.3		93690	141801829	NM_053107.3	Gpr45	NP_444337.2	ILMN_1228145	007040114	S	3556	GTCGGGGGCAAGCATATGGGCACCTCTCCTCCAGTGGTATTTTAGAGAAT	1	+	43092081-43092130	1qB	Mus musculus G protein-coupled receptor 45 (Gpr45), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISS]	PSP24alpha; 9230112G11Rik; AW046772	PSP24alpha; 9230112G11Rik; AW046772
Mus musculus	RefSeq	ILMN_193560	ILMN_229042	WDR59	NM_176923.3	NM_176923.3		319481	142372339	NM_176923.3	Wdr59	NP_795897.1	ILMN_2680852	001440176	S	3552	CCTTGCACATACTGGTGAGCAGCCATACCACTGAGTTACATTCCAGCCCC	8	-	113974124-113974173	8qE1	Mus musculus WD repeat domain 59 (Wdr59), mRNA.				5430401O09Rik; CDW12/WDR59	5430401O09Rik; CDW12/WDR59
Mus musculus	RefSeq	ILMN_199448	ILMN_199448	LOC383482	XM_357087.1	XM_357087.1			38049378	XM_357087.1	LOC383482		ILMN_2535244	004200241	S	288	TTTTCGCAGCTACCAAGACAGCAGTGAGGAGAGATCTTTACTAGGAGATC										
Mus musculus	Riken	ILMN_203434	ILMN_203434	BC003314	ri|C630044A22|PX00085I24|AK049998|2226					AK049998	BC003314		ILMN_1237789	002260431	S	1896	AGAAGATATAGAGGAACCGCAAGGTTCACGGCCACAGGCCCAGCCCTGAC										
Mus musculus	MEEBO	ILMN_191735	ILMN_191735	ZRANB1	scl0360216.1_60	XM_355951.1			38087461	XM_355951.1	Zranb1		ILMN_2481711	004490386	S	20	GGAAACTTTGTACAAATTATCCACGGCAAGATAAAAATAAACAAGCCTTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_188020	ILMN_244070	MAP4K2	NM_009006.2	NM_009006.2		26412	118130565	NM_009006.2	Map4k2	NP_033032.1	ILMN_1213030	006620553	S	2241	TGAGACTGTGGTGTGTCTGCAGGATAGTGTGCTGGCGTTCTGGAGCCATG	19	+	6343133-6343176:6343255-6343260	19qA	Mus musculus mitogen-activated protein kinase kinase kinase kinase 2 (Map4k2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process by which vesicles are directed to specific destination membranes, mediated by microtubules that grow between molecules at the vesicle membrane and target membrane surfaces [goid 6903] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI385662; GCK; Rab8ip; MGC143893; BL44; MGC143894	AI385662; GCK; Rab8ip; MGC143893; BL44; MGC143894
Mus musculus	RefSeq	ILMN_226632	ILMN_226632	2610042L04RIK	NM_001024713.1	NM_001024713.1		545015	67010056	NM_001024713.1	2610042L04Rik	NP_001019884.1	ILMN_3136593	000450369	A	694	TCCAAGGAACTGATAGAAGATAACTATTCCTACAGCATTAAGGAGGACCA	14	-	6340367-6340382:6341059-6341092		Mus musculus RIKEN cDNA 2610042L04 gene (2610042L04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_226632	ILMN_226632	2610042L04RIK	NM_001024713.1	NM_001024713.1		545015	67010056	NM_001024713.1	2610042L04Rik	NP_001019884.1	ILMN_3059346	007560544	I	81	CAGCGGGATGGAGCCTCAGCATCTGCGCCCCGGGTTTGGATCCCAGAGCA	14	-	6358845-6358894		Mus musculus RIKEN cDNA 2610042L04 gene (2610042L04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_253291	ILMN_253291	PRSS29	NM_053260.2	NM_053260.2		114662	31981507	NM_053260.2	Prss29	NP_444490.1	ILMN_3049094	002750382	I	510	GTCGCTGCCTCCTCCCTACCGCCTACAGCAGGTGCAGGTAAAGATAATTG	17	+	25459038-25459087	17qA3.3	Mus musculus protease, serine, 29 (Prss29), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Isp2; mISP-2; MGC123865; D19363	Isp2; mISP-2; MGC123865; D19363
Mus musculus	RefSeq	ILMN_253291	ILMN_253291	PRSS29	NM_053260.2	NM_053260.2		114662	31981507	NM_053260.2	Prss29	NP_444490.1	ILMN_3125011	002470762	A	781	TATGCACGTGTACAGTCCTTCCTGCCCTGGATCACGCAGCAGATGCAGAG	17	+	25459393-25459442	17qA3.3	Mus musculus protease, serine, 29 (Prss29), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Isp2; mISP-2; MGC123865; D19363	Isp2; mISP-2; MGC123865; D19363
Mus musculus	RefSeq	ILMN_199627	ILMN_252281	LOC632847	XM_907107.3	XM_907107.3		632847	149250336	XM_907107.3	LOC632847	XP_912200.3	ILMN_2535908	002350349	S	760	TTGCGGCAGCAGCTGGACCAAGCCAGCAAAACCTGTCGCATCCTGCAGTA					PREDICTED: Mus musculus hypothetical LOC632847 (LOC632847), mRNA.					
Mus musculus	MEEBO	ILMN_213845	ILMN_213845	1200016G03RIK	scl46712.11.1047_6	XM_283319.2			38077175	XM_283319.2	1200016G03Rik		ILMN_1222685	002340132	S	2619	GGGCCTTCAAAGGACTCAACCCAAGGGAGCCATTCTGTATCCACCATGGG										
Mus musculus	Riken	ILMN_204266	ILMN_204266	C820012K02RIK	ri|C820012K02|PX00088M05|AK050539|1655					AK050539	C820012K02Rik		ILMN_1238726	006400196	S	1121	CATGGACAAAAGCGGGAAGAATGGCAACAGAAAGAATGCTCTCATAGAGC										
Mus musculus	RefSeq	ILMN_219282	ILMN_261823	2610206C17RIK	XM_895846.2	XM_895846.2		72495	94380802	XM_895846.2	2610206C17Rik	XP_900939.1	ILMN_2706739	001850463	S	1481	GTCCCCAGGCCCCCAGTGATGAGTTTGGAAAGCCCACAGAACTCTAGCCA	7	+	91924823-91924872	7qD3	PREDICTED: Mus musculus RIKEN cDNA 2610206C17 gene (2610206C17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197022	ILMN_197022	LOC240879	XM_136356.3	XM_136356.3			38073548	XM_136356.3	LOC240879		ILMN_1256830	004050259	S	1262	CCAGTGTGGAGAAAACGGCCCACTAAGAATGGCTACATGGTCTCACAGGC										
Mus musculus	RefSeq	ILMN_188848	ILMN_188848	V1RH14	NM_134239.1	NM_134239.1		171273	21717780	NM_134239.1	V1rh14	NP_599000.1	ILMN_2861703	001230327	S	827	ATGCAGTCTTCAGCCCCCTTGTGCTGATTCACAGGGATGGGCTTCTGCCT	13	-	23205723-23205772	13qA3.1	Mus musculus vomeronasal 1 receptor, H14 (V1rh14), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	MEEBO	ILMN_223116	ILMN_223116	9830005G06RIK	scl29464.7_446	NM_172732.1			27370067	NM_172732.1	9830005G06Rik		ILMN_1237681	004060609	S	2951	GGTGGAGCCTTCCATCCTATTGCTCACAGATCAAACGGCTCAGTCTGCGC										
Mus musculus	RefSeq	ILMN_206171	ILMN_225337	PPP1R1C	XM_987851.1	XM_987851.1		75276	94366588	XM_987851.1	Ppp1r1c	XP_992945.1	ILMN_1240956	006560719	S	2990	AGGCAGGTTTCTCATTACAGTGGTCCTGCAGTGTGGGCTCTGTGGATAGG				2qC3	PREDICTED: Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 1C, transcript variant 4 (Ppp1r1c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213941	ILMN_213941	BTN2A2	NM_175938.2	NM_175938.2		238555	31341646	NM_175938.2	Btn2a2	NP_787952.1	ILMN_2968694	002940327	S	1900	GCTGCTCTGGTCACAGTGGATATCAGGCAAGAGCAACAGGGTGGATCAGG	13	-	23485417-23485466	13qA3.1	Mus musculus butyrophilin, subfamily 2, member A2 (Btn2a2), mRNA.				D030063K05; Btn2	D030063K05; Btn2
Mus musculus	MEEBO	ILMN_193145	ILMN_193145	A430106J12RIK	scl41747.19_38				31341153	NM_176841	A430106J12Rik		ILMN_2494474	002680167	S	2	GTCATTAAGATGTTTGGGTAGAGAGTCAGTTCTGTCAATCCTAAAATAAG										
Mus musculus	RefSeq	ILMN_216275	ILMN_216275	UBTD2	NM_173784.3	NM_173784.3		327900	40254262	NM_173784.3	Ubtd2	NP_776145.2	ILMN_2669259	003450349	S	137	CTTCGGGCAGCCTCAACGAGAACTCGGACGGCACGGGAGTTGCTCTAGGT	11	+	32355508-32355546:32399225-32399235	11qA4	Mus musculus ubiquitin domain containing 2 (Ubtd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		AI645720; 4930571L24; 9630054F20Rik	AI645720; 4930571L24; 9630054F20Rik
Mus musculus	RefSeq	ILMN_216275	ILMN_216275	UBTD2	NM_173784.3	NM_173784.3		327900	40254262	NM_173784.3	Ubtd2	NP_776145.2	ILMN_2822552	003780112	S	2737	AGGTCTTGTTTCTTGAGGGTTTGTCCTAAGAGATTTGTGGGGTCTTTTGG	11	+	32418414-32418463	11qA4	Mus musculus ubiquitin domain containing 2 (Ubtd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		AI645720; 4930571L24; 9630054F20Rik	AI645720; 4930571L24; 9630054F20Rik
Mus musculus	RefSeq	ILMN_216275	ILMN_216275	UBTD2	NM_173784.3	NM_173784.3		327900	40254262	NM_173784.3	Ubtd2	NP_776145.2	ILMN_2697944	005570520	S	2685	ATTATTTTTCTAAAGGAAATTTGATGGTGTCATGAATAACCTGATTGTTA	11	+	32418362-32418411	11qA4	Mus musculus ubiquitin domain containing 2 (Ubtd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		AI645720; 4930571L24; 9630054F20Rik	AI645720; 4930571L24; 9630054F20Rik
Mus musculus	RefSeq	ILMN_216275	ILMN_216275	UBTD2	NM_173784.3	NM_173784.3		327900	40254262	NM_173784.3	Ubtd2	NP_776145.2	ILMN_1221494	000130446	S	2724	CCTGATTGTTAAAAGGTCTTGTTTCTTGAGGGTTTGTCCTAAGAGATTTG	11	+	32418401-32418450	11qA4	Mus musculus ubiquitin domain containing 2 (Ubtd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		AI645720; 4930571L24; 9630054F20Rik	AI645720; 4930571L24; 9630054F20Rik
Mus musculus	RefSeq	ILMN_191098	ILMN_226268	MBTD1	NM_134012.2	NM_134012.2		103537	133892941	NM_134012.2	Mbtd1	NP_598773.1	ILMN_2726515	000580408	S	2636	TTCTACCGAATTGTGACTGACTCAGAGAGCTCTAGCATTTACCAGTGAGG	11	+	93806392-93806441	11qD	Mus musculus mbt domain containing 1 (Mbtd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	hemp; AI194990; AA408199	hemp; AI194990; AA408199
Mus musculus	RefSeq	ILMN_223639	ILMN_223639	NEUROD4	NM_007501.2	NM_007501.2		11923	31982500	NM_007501.2	Neurod4	NP_031527.1	ILMN_2766939	006840114	S	3056	GGTTTTAGATTTTTTTCCTTTAAGGTGCAACAGAGTTACATTATTATTTA	10	-	129671326-129671375	10qD3	Mus musculus neurogenic differentiation 4 (Neurod4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	ATH-3; Math3; AI846749; Atoh3; MATH-3	ATH-3; Math3; AI846749; Atoh3; MATH-3
Mus musculus	RefSeq	ILMN_223639	ILMN_223639	NEUROD4	NM_007501.2	NM_007501.2		11923	31982500	NM_007501.2	Neurod4	NP_031527.1	ILMN_2977633	005050553	S	2725	CACCACCCCTAAGACCTTGAATCACCCTAGTGGAAATAGGCAAGGAGAAT	10	-	129671657-129671706	10qD3	Mus musculus neurogenic differentiation 4 (Neurod4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	ATH-3; Math3; AI846749; Atoh3; MATH-3	ATH-3; Math3; AI846749; Atoh3; MATH-3
Mus musculus	RefSeq	ILMN_233038	ILMN_233038	TAAR7B	NM_001010827.1	NM_001010827.1		209517	58082056	NM_001010827.1	Taar7b	NP_001010827.1	ILMN_2926408	001410341	S	606	GGGTGGCTGTCAACTTGCAGTGAATCAAAGCTGGGTCTTCATCAATTTCC	10	+	23720350-23720399	10qA4	Mus musculus trace amine-associated receptor 7B (Taar7b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm698	Gm698
Mus musculus	RefSeq	ILMN_209518	ILMN_209518	PHACTR1	NM_198419.3	NM_198419.3		218194	54144632	NM_198419.3	Phactr1	NP_940811.2	ILMN_3062286	006270437	I	400	CAGACTCTTGGATGTGGAGTCGGCGCAGAGGTTCTTCTACAGTCAAGGAG	13	+	42778114-42778163	13qA4	Mus musculus phosphatase and actin regulator 1 (Phactr1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	Rpel1; 9630030F18Rik	Rpel1; 9630030F18Rik
Mus musculus	RefSeq	ILMN_198311	ILMN_198311	LOC225155	XM_140336.2	XM_140336.2			38083788	XM_140336.2	LOC225155		ILMN_2531235	001780131	S	2890	GAGCAAGAGAAGGCTGAGATGGATGACATTTCCCTAGAAATGGAGACTCC										
Mus musculus	Riken	ILMN_207035	ILMN_207035	3010015F07RIK	ri|3010015F07|ZX00083D24|AK076147|1801					AK076147	3010015F07Rik		ILMN_1216594	002470484	S	1	GGAAGATTCTCTCTGCGTTTGCTGTCGCTGCAGCAGCGGACGACCTCATT										
Mus musculus	MEEBO	ILMN_187002	ILMN_187002	4933433H22RIK	scl50438.8_8						4933433H22Rik		ILMN_2440335	004850110	S	5	GTTCACCTTGACTTCCTTCTAGGACTGCAGCCACAACATCCCCAGGTCCC										
Mus musculus	RefSeq	ILMN_201447	ILMN_201447	LOC385180	XM_358103.1	XM_358103.1			38093920	XM_358103.1	LOC385180		ILMN_1221213	004390678	S	473	GCACAGTGGATCATGCTGTCTCCCCATTGGAGCCTGTGAAACCAAAGTGG										
Mus musculus	RefSeq	ILMN_222640	ILMN_222640	1500003O22RIK	NM_025897.1	NM_025897.1		101867	20270197	NM_025897.1	1500003O22Rik	NP_080173.1	ILMN_2752665	002490161	S	2197	TAACCTTCTTGTCTTACAGTATGTTAAATGGGTTCACTGAGGAAAGCTAC	7	-	112880769-112880818	7qE3	Mus musculus RIKEN cDNA 1500003O22 gene (1500003O22Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AW538116; 2900001K19Rik	AW538116; 2900001K19Rik
Mus musculus	RefSeq	ILMN_232464	ILMN_232464	PCF11	NM_029078.2	NM_029078.2		74737	50897275	NM_029078.2	Pcf11	NP_083354.2	ILMN_3160194	001510523	S	4807	CCCTGTGAAAGTCCCAAAGTTAAGGAAGAACAAATTGATGCCCCACCAGC	7	-	99793141-99793190	7qE1	Mus musculus cleavage and polyadenylation factor subunit homolog (S. cerevisiae) (Pcf11), mRNA.				KIAA0824; C77803; 5730417B17Rik; 2500001H09Rik	KIAA0824; C77803; 5730417B17Rik; 2500001H09Rik
Mus musculus	RefSeq	ILMN_213892	ILMN_213892	FASTKD1	NM_177244.3	NM_177244.3		320720	56710328	NM_177244.3	Fastkd1	NP_796218.2	ILMN_3162793	002480010	I	2551	TGAGTGGAACTCTATGGCAATGTCAACGAAGGATGCACGGATGGACTACC	2	-	69525136-69525185	2qC2	Mus musculus FAST kinase domains 1 (Fastkd1), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	KIAA1800; RP23-174C9.1; mKIAA1800; 5330408N05Rik	KIAA1800; RP23-174C9.1; mKIAA1800; 5330408N05Rik
Mus musculus	RefSeq	ILMN_210642	ILMN_245873	SH2D5	XM_979356.1	XM_979356.1		230863	94373899	XM_979356.1	Sh2d5	XP_984450.1	ILMN_2607718	000270468	S	171	AGGCAGAATTGGTCTTTTGTCTCTGTCACGTGCCCCGGACGTTGGTGAGC					PREDICTED: Mus musculus SH2 domain containing 5 (Sh2d5), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217054	ILMN_217054	ZFP775	NM_173429.2	NM_173429.2		243372	118129816	NM_173429.2	Zfp775	NP_775605.1	ILMN_2678598	003710343	S	3984	CTAGATGCGTAGAACATAGCCCCTGCCCTCACTGAAGGACTTCCTAGGGA	6	+	48573127-48573176	6qB2.3	Mus musculus zinc finger protein 775 (Zfp775), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C130032F08Rik	C130032F08Rik
Mus musculus	RefSeq	ILMN_253400	ILMN_253400	OLFR309	NM_001011866.1	NM_001011866.1		258196	58801493	NM_001011866.1	Olfr309	NP_001011866.1	ILMN_3160828	000150274	S	540	CCCGCTGCTTGCTTTGTCCTGTAGTCCTGTAAGAGTCAATGAGGTGATGG	7	-	93455032-93455081	7qD3	Mus musculus olfactory receptor 309 (Olfr309), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR251-4P	MOR251-4P
Mus musculus	MEEBO	ILMN_219593	ILMN_219593	OLFR667	scl0259062.1_59				22128834	NM_147060	Olfr667		ILMN_1213880	003840609	S	594	GTCTATGGTCTGCTGGTTGCTCTTGTGGTTTGTGCATTTGACATATTCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217337	ILMN_318284	LOC100045567	XM_001474536.1	XM_001474536.1		100045567	149265957	XM_001474536.1	LOC100045567	XP_001474586.1	ILMN_1256633	004890113	S	726	TATGGAGAGCATTCCACTCCCGGATCGTGGCAGCTGACCTGCAATGGAGT					PREDICTED: Mus musculus similar to purine nucleoside phosphorylase (LOC100045567), mRNA.					
Mus musculus	Riken	ILMN_201631	ILMN_201631	1110002D22RIK	ri|1110002D22|R000015E18|AK003285|794					AK003285	1110002D22Rik		ILMN_2543346	004150427	S	697	CTCAGGAAGCTGAGGCAGGAGGATCACAAGTTCCAGGCTAGGTTGGCTAC										
Mus musculus	Riken	ILMN_203691	ILMN_203691	SLC26A3	ri|9530095G06|PX00114P05|AK035716|3465					AK035716	Slc26a3		ILMN_2559248	005490039	S	2957	TTCTCTGGATCACACACAGAGCGTCACTGGTGGGCTAGCTCTCTGCAGGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA];  [goid 15380] [evidence IDA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214543	ILMN_214543	ANKMY1	NM_172850.1	NM_172850.1		241158	27370283	NM_172850.1	Ankmy1	NP_766438.1	ILMN_2889465	002320152	S	2844	GCTGAAGAAAAAAGGTTCCAGCTCGGTTAGGACCCAATCCTCGGAGAAGC	1	-	94702080-94702129	1qD	Mus musculus ankyrin repeat and MYND domain containing 1 (Ankmy1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC141406; 4930483I10Rik; ZMYND13	MGC141406; 4930483I10Rik; ZMYND13
Mus musculus	RefSeq	ILMN_195865	ILMN_245586	RARB	NM_011243.1	NM_011243.1		218772	45593123	NM_011243.1	Rarb	NP_035373.1	ILMN_1246864	005550133	S	166	GCACTTTTGCAGAGCGCGGTGCGGAGAGATCATGTTTGACTGTATGGATG	14	-	17407509-17407528:17407529-17407558	14qA2	Mus musculus retinoic acid receptor, beta (Rarb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43068] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	A830025K23; Nr1b2; RARbeta2; Hap	A830025K23; Nr1b2; RARbeta2; Hap
Mus musculus	RefSeq	ILMN_195865	ILMN_245586	RARB	NM_011243.1	NM_011243.1		218772	45593123	NM_011243.1	Rarb	NP_035373.1	ILMN_2617194	002650131	S	1879	CGGCTCTGTTCTTTCTATACTGTATGTTGGTGCTTTCTTTTGTCTTGCAT	14	-	17264199-17264248	14qA2	Mus musculus retinoic acid receptor, beta (Rarb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43068] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	A830025K23; Nr1b2; RARbeta2; Hap	A830025K23; Nr1b2; RARbeta2; Hap
Mus musculus	RefSeq	ILMN_245586	ILMN_245586	RARB	NM_011243.1	NM_011243.1		218772	45593123	NM_011243.1	Rarb	NP_035373.1	ILMN_2886828	005220097	S	2461	CCTGGGATTTCCCCCAGTCTTGATGCTTGAAGGTATGGGCAAGTGGCCTC	14	-	17263617-17263666	14qA2	Mus musculus retinoic acid receptor, beta (Rarb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43068] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	A830025K23; Nr1b2; RARbeta2; Hap	A830025K23; Nr1b2; RARbeta2; Hap
Mus musculus	Riken	ILMN_205528	ILMN_205528	NSF	ri|D130048H19|PX00185C01|AK051430|3213					AK051430	Nsf		ILMN_1243464	007400438	S	2805	GAAGTTCTGTGTCCTGCTGTGCAGTGGTTGAGGAGGGTTCTTCTCTGTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive some other reaction, for example ion transport across a membrane [goid 42623] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223172	ILMN_223172	POLDIP2	NM_026389.3	NM_026389.3		67811	118129810	NM_026389.3	Poldip2	NP_080665.1	ILMN_2760263	003310639	S	1868	GCCCCAGGTCTTAGGATTCCTTCACCACTATAGTTACTGTTAGAGGTCCT	11	+	78334620-78334669	11qB5	Mus musculus polymerase (DNA-directed), delta interacting protein 2 (Poldip2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence ISA]	RP23-399H5.6; Pdip38; 1300003F06Rik	RP23-399H5.6; Pdip38; 1300003F06Rik
Mus musculus	Riken	ILMN_206023	ILMN_206023	C230090G04RIK	ri|C230090G04|PX00177F19|AK049000|1546					AK049000	C230090G04Rik		ILMN_1214844	006760670	S	1416	GCCAGGCTAGCACTCAACCAACTGAACACAGTCCTTGCCACCCCAATCCT										
Mus musculus	Riken	ILMN_201737	ILMN_201737	COPS7A	ri|2010208G19|ZX00044G08|AK008474|494					AK008474	Cops7a		ILMN_1219146	006180180	S	380	GAGTGCTGGGCTCGTTTTTTGTACCCAGTAACCACTCAGGTGATCGGGGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_205303	ILMN_205303	4932417H02RIK	ri|4832440O09|PX00313O16|AK029341|3164					AK029341	4932417H02Rik		ILMN_1218033	003180487	S	3064	GAAGCCACAGCATGATCCAAAGCAGGATGGGAGCTGGTGGACAGTGGAGC								The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_207342	ILMN_207342	TCF12	ri|6720451G18|PX00649O02|AK078415|1134					AK078415	Tcf12		ILMN_1258340	005080356	S	915	GAAGAAGCAGTAGGCTAGCATTACACAATTCTTTGCTACCACATGACCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196658	ILMN_196658	D930038J03RIK	XM_355639.1	XM_355639.1			38080762	XM_355639.1	D930038J03Rik		ILMN_2657338	003180603	S	3526	TGTCACCATGCCTTTTAGTGGAGACCTGCAGGCAAGCCTTTGGCCCACTG										
Mus musculus	RefSeq	ILMN_254674	ILMN_254674	OLFR1167	NM_146294.1	NM_146294.1		258291	22129696	NM_146294.1	Olfr1167	NP_666406.1	ILMN_2912805	000510202	S	703	GGACTACAGAAAGCCTTCTCCACCTGTACTTCCCACCTGACTGCCATAAC	2	-	87989422-87989471	2qD	Mus musculus olfactory receptor 1167 (Olfr1167), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR174-16	MOR174-16
Mus musculus	RefSeq	ILMN_199889	ILMN_225794	LOC625445	XM_984960.1	XM_984960.1		625445	94373640	XM_984960.1	LOC625445	XP_990054.1	ILMN_2536853	006450044	S	233	GTGAGATGCTCGCAGTGAAGGGTCCAGATGGTGGGATGCTCGCAGTGAAG					PREDICTED: Mus musculus similar to SON protein (SON3) (Negative regulatory element-binding protein) (NRE-binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1) (LOC625445), mRNA.					
Mus musculus	RefSeq	ILMN_217224	ILMN_227257	LOC667214	XM_989063.2	XM_989063.2		667214	149261873	XM_989063.2	LOC667214	XP_994157.1	ILMN_1249820	006480022	S	610	CGGAGTAATCCTAGGAGATTCAACAGAGAGAACACATTAAAGCAGATTCG	11	-	48780819-48780868	11qB1.2	PREDICTED: Mus musculus similar to immunity-related GTPase family, cinema 1 (LOC667214), mRNA.					
Mus musculus	RefSeq	ILMN_198899	ILMN_240640	GM22	XM_001001798.2	XM_001001798.2		195209	149259302	XM_001001798.2	Gm22	XP_001001798.2	ILMN_1246733	003520458	S	10486	GGCCCAAACTGCCTCCATAGAAGGTGCTGGGGTCTTTCAGAATGCCTCCT				8qE1	PREDICTED: Mus musculus gene model 22, (NCBI) (Gm22), mRNA.					
Mus musculus	MEEBO	ILMN_222746	ILMN_222746	1700054A03RIK	scl52959.3.1_284	XM_148917.1			20890235	XM_148917.1	1700054A03Rik		ILMN_2754185	001500554	S	708	GTTGCTTCTATCTGCACAGGTTTAACTCAAGAAATCGTCATCACCAGAAT										
Mus musculus	RefSeq	ILMN_216193	ILMN_216193	NOTCH4	NM_010929.2	NM_010929.2		18132	114326468	NM_010929.2	Notch4	NP_035059.2	ILMN_1220697	004250059	S	6488	GCCATGTTCTCCAGTCACTGCTATCTCCGAGAACCCCAAACTCATGGATA	17	+	34718106-34718132:34718324-34718346	17qB1	Mus musculus Notch gene homolog 4 (Drosophila) (Notch4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence TAS]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell differentiation [goid 45602] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Int3; Int-3	Int3; Int-3
Mus musculus	MEEBO	ILMN_215817	ILMN_215817	3930402G23RIK	scl35105.3_256				51763929	XM_489221	3930402G23Rik		ILMN_2663933	001010220	S	2590	GCTGACCTTGCAGCGTAACACGTTCATCCTGTATTTTTCTGCCACTGCCA										
Mus musculus	RefSeq	ILMN_223783	ILMN_223783	NDUFB4	NM_026610.1	NM_026610.1		68194	21314825	NM_026610.1	Ndufb4	NP_080886.1	ILMN_1227012	005420452	S	389	TCTCCTACTAAGTTCGGCAAGGATGACTATTCTTGCATAAATAAATCTCC	16	-	37647703-37647742:37647743-37647752	16qB3	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4 (Ndufb4), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]	0610006N12Rik; 1300010H20Rik	0610006N12Rik; 1300010H20Rik
Mus musculus	MEEBO	ILMN_194073	ILMN_194073	SCL0002155.1_6	scl0002155.1_6	AK017941.1			12857446	AK017941.1	scl0002155.1_6		ILMN_1241032	006200440	S	19	AGTCTCCGGGCCGGTGAGTGAGGTTGGGGGTGAACCATCTGTGAGTTCTT										
Mus musculus	RefSeq	ILMN_219322	ILMN_219322	METTL7B	NM_027853.2	NM_027853.2		71664	142376702	NM_027853.2	Mettl7b	NP_082129.2	ILMN_2707227	005260408	S	1147	GGGGTTCGGAGGAATGGGCGAGCAGAAAAACCTTAGGATGAGAGAGCGGC	10	-	128395363-128395412	10qD3	Mus musculus methyltransferase like 7B (Mettl7b), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	0610006F02Rik; AI266817	0610006F02Rik; AI266817
Mus musculus	RefSeq	ILMN_223845	ILMN_325870	LOC100038862	XM_001471911.1	XM_001471911.1		100038862	149268465	XM_001471911.1	LOC100038862	XP_001471961.1	ILMN_2770339	007400066	S	3504	GACAAAAATGTGTTTAATCATTCCTAAGATAAATGAATCCATGGCTTTCT	17	+	34522922-34522971	17qB1	PREDICTED: Mus musculus hypothetical protein LOC100038862 (LOC100038862), mRNA.					
Mus musculus	RefSeq	ILMN_222390	ILMN_222390	CHRDL2	NM_133709.2	NM_133709.2		69121	31982586	NM_133709.2	Chrdl2	NP_598470.2	ILMN_2748934	005270307	S	1410	AAGGACCTAAAGAGTTGCAGATACGAGTTTTATTGGTTTTGTTATTATAT	7	+	107183161-107183210	7qE2	Mus musculus chordin-like 2 (Chrdl2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Chl2; 1810022C01Rik	Chl2; 1810022C01Rik
Mus musculus	RefSeq	ILMN_222726	ILMN_222726	RNF183	NM_153504.2	NM_153504.2		76072	31981978	NM_153504.2	Rnf183	NP_705724.1	ILMN_2753931	005080471	S	654	CATGTCATCCTAGAGGGCCACCAGCTCTGTCTCAAGGACCAGCCCAAGAG	4	-	61914603-61914652	4qB3	Mus musculus ring finger protein 183 (Rnf183), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5830442J12Rik	5830442J12Rik
Mus musculus	RefSeq	ILMN_187579	ILMN_314353	LOC100047651	XM_001478602.1	XM_001478602.1		100047651	149259304	XM_001478602.1	LOC100047651	XP_001478652.1	ILMN_2445324	005220440	S	2974	TATTACTGCTCTTCTCACGCCGCCGAGCACGTAAAGTGAGCCTGTGGGGC					PREDICTED: Mus musculus similar to FOG (LOC100047651), mRNA.					
Mus musculus	RefSeq	ILMN_224828	ILMN_224828	PPP1R11	NM_029632.1	NM_029632.1		76497	18390326	NM_029632.1	Ppp1r11	NP_083908.1	ILMN_2816137	000050102	S	289	AAACTTCGGAAACGCAAGCCAGAGAAGAAGGTGGAGTGGTCCAGTGACAC	17	-	37135546-37135595	17qB1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 11 (Ppp1r11), mRNA.			Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IDA]	AV117883; 1500041B02Rik; Tctex-5; HCGV; HCG-V; Tctex5; Tcte5	AV117883; 1500041B02Rik; Tctex-5; HCGV; HCG-V; Tctex5; Tcte5
Mus musculus	RefSeq	ILMN_190641	ILMN_224828	PPP1R11	NM_029632.1	NM_029632.1		76497	18390326	NM_029632.1	Ppp1r11	NP_083908.1	ILMN_2757489	006510445	S	334	GACACTGTGGACAATGAGCATATGGGGCGACGCTCGTCGAAATGCTGCTG	17	-	37135179-37135186:37135509-37135550	17qB1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 11 (Ppp1r11), mRNA.			Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IDA]	AV117883; 1500041B02Rik; Tctex-5; HCGV; HCG-V; Tctex5; Tcte5	AV117883; 1500041B02Rik; Tctex-5; HCGV; HCG-V; Tctex5; Tcte5
Mus musculus	Riken	ILMN_203207	ILMN_203207	B230207K24RIK	ri|B230207K24|PX00069E08|AK045503|2338					AK045503	B230207K24Rik		ILMN_1239502	004900414	S	1990	AGTGTGAAATGGACAAGGCTGGCTCCTGAGAGCGGTAGGGAGGGGTTTGG										
Mus musculus	MEEBO	ILMN_210517	ILMN_210517	LOC380797	scl0002354.1_233	XM_354709.1			38073784	XM_354709.1	LOC380797		ILMN_1224473	000630482	S	390	CCTCTGTCCTCTCACACATTTCTAGATACCTCCATCCCAAACATGACAAG										
Mus musculus	MEEBO	ILMN_213271	ILMN_213271	EIF3S8	scl0056347.2_235	NM_019646.1			9790118	NM_019646.1	Eif3s8		ILMN_1223428	000580241	S	1556	CAGACAACCTCCTGAGTTCCCCACTTCAGTCACCCTGTGGACAGACCATC										
Mus musculus	Riken	ILMN_202231	ILMN_202231	4930405H06RIK	ri|4930405H06|PX00029N17|AK015098|792					AK015098	4930405H06Rik		ILMN_2547999	006560397	S	696	TCAGAAGGAGCCCCACTGGACTTGCCTGGGTTGCAGTAAACACCTTGGGC										
Mus musculus	RefSeq	ILMN_219737	ILMN_219737	PRPF6	NM_133701.2	NM_133701.2		68879	124001547	NM_133701.2	Prpf6	NP_598462.1	ILMN_2712957	006860554	S	2974	GGGGTGACAATAGGAGCAACACATGGACAATGGGCACAAACCCTACACTG	2	+	181390285-181390334	2qH4	Mus musculus PRP6 pre-mRNA splicing factor 6 homolog (yeast) (Prpf6), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with an androgen receptor [goid 50681] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]	2610031L17Rik; ANT-1; U5-102K; MGC11655; 1190003A07Rik; MGC38351; MGC36967	2610031L17Rik; ANT-1; U5-102K; MGC11655; 1190003A07Rik; MGC38351; MGC36967
Mus musculus	RefSeq	ILMN_223374	ILMN_223374	SH2B2	NM_018825.3	NM_018825.3		23921	118130730	NM_018825.3	Sh2b2	NP_061295.2	ILMN_2763206	004120408	S	1937	ACTTGCCCGCCCGCTTCACCGTCCAATGGCGCTGGAGCTTCGTCTTCATC	5	-	136694880-136694929	5qG2	Mus musculus SH2B adaptor protein 2 (Sh2b2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B or T cell [goid 50851] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46325] [evidence ISA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence ISA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; The process of regulating the proliferation and elimination of B cells of the B-1 subset such that the total number of B-1 B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity [goid 1922] [evidence IMP]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The binding activity of a molecule that brings together a transmembrane receptor protein kinase and one or more other molecules, permitting them to function in a coordinated way [goid 5068] [evidence IDA]	Aps	Aps
Mus musculus	RefSeq	ILMN_221593	ILMN_257876	4931423N10RIK	XM_913009.2	XM_913009.2		70981	94366169	XM_913009.2	4931423N10Rik	XP_918102.1	ILMN_2737567	004220524	S	1303	CCTTTTACAACCAATGAAGCAAGCGTGGAGAAGACACAAACCCGCAGACC				2qA3	PREDICTED: Mus musculus RIKEN cDNA 4931423N10 gene (4931423N10Rik), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188933	ILMN_188933	WNT7B	NM_009528.2	NM_009528.2		22422	34328152	NM_009528.2	Wnt7b	NP_033554.2	ILMN_2789692	003400202	S	2961	AGAGAGGTGGTTAGTGGACCCAGGCAGGGCACTGGCTGTCCCAATGCTGT	15	-	85365990-85366039	15qE2	Mus musculus wingless-related MMTV integration site 7B (Wnt7b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IGI]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	Wnt-7b	Wnt-7b
Mus musculus	RefSeq	ILMN_188933	ILMN_188933	WNT7B	NM_009528.2	NM_009528.2		22422	34328152	NM_009528.2	Wnt7b	NP_033554.2	ILMN_2456957	001440088	S	2387	CCACCCTTTCCTCCACAACACATGGCAGGGTAAGAAACTGCCAGGGCTGA	15	-	85366564-85366613	15qE2	Mus musculus wingless-related MMTV integration site 7B (Wnt7b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IGI]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	Wnt-7b	Wnt-7b
Mus musculus	RefSeq	ILMN_193851	ILMN_247289	SEC22C	NM_178677.3	NM_178677.3		215474	142372397	NM_178677.3	Sec22c	NP_848792.1	ILMN_1248456	001110291	S	1144	CTGGAAGGCCAGTCTGTGTCCACTCCTGCTTCTCAGCTTCACCTCAACCC	9	-	121593682-121593731	9qF4	Mus musculus SEC22 vesicle trafficking protein homolog C (S. cerevisiae) (Sec22c), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Sec22l3; 5930407I15Rik; C530046H07; 4932412K21	Sec22l3; 5930407I15Rik; C530046H07; 4932412K21
Mus musculus	RefSeq	ILMN_193851	ILMN_247289	SEC22C	NM_178677.3	NM_178677.3		215474	142372397	NM_178677.3	Sec22c	NP_848792.1	ILMN_2752506	002070278	S	2525	GCAGCTTCCTCGGACGTGAACTTCAGCCTCACGTCAATGTTGATCTCACG	9	-	121592301-121592350	9qF4	Mus musculus SEC22 vesicle trafficking protein homolog C (S. cerevisiae) (Sec22c), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Sec22l3; 5930407I15Rik; C530046H07; 4932412K21	Sec22l3; 5930407I15Rik; C530046H07; 4932412K21
Mus musculus	Riken	ILMN_204870	ILMN_204870	A230021I18RIK	ri|A230021I18|PX00126B09|AK038513|1876					AK038513	A230021I18Rik		ILMN_1239503	000610347	S	1826	AGCCCATGGCCGAGCTGACGTTCACGGGAAAAACAGAGTACAAGTGGTCG										
Mus musculus	MEEBO	ILMN_216623	ILMN_216623	9530051K01RIK	scl31019.5_264				51761717	XM_485965	9530051K01Rik		ILMN_2673332	003840187	S	2368	CCCAGGGACCCTGTCTTACGATGCTTTTCTACGTCAATGCAATTGTGGCC										
Mus musculus	RefSeq	ILMN_197772	ILMN_197772	LOC239556	XM_139476.2	XM_139476.2			38077922	XM_139476.2	LOC239556		ILMN_1258937	004570471	S	5921	TGAGCCTTTCTAGGGTCACAAGGGTCACAAACCTGGCTCCAGTCCTGCTC										
Mus musculus	RefSeq	ILMN_189325	ILMN_224306	DRD1A	NM_010076.2	NM_010076.2		13488	142366202	NM_010076.2	Drd1a	NP_034206.1	ILMN_2734062	004860307	S	2893	GCATCGAGGTGAATGAGCTGTAAAGTCACAGGTCACAGCAGCCCCTCCGA	13	-	54147138-54147187	13qB1	Mus musculus dopamine receptor D1A (Drd1a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IGI]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex [goid 21853] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence ISO]; The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IGI]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51968] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IGI]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; Behavior associated with the intake of food [goid 7631] [evidence IGI]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence ISO]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D1 receptors [goid 1590] [evidence IDA]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D1 receptors [goid 1590] [evidence IMP]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D1 receptors [goid 1590] [evidence IDA]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D1 receptors [goid 1590] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IDA]	Drd1; Drd-1; Gpcr15; C030036C15Rik	Drd1; Drd-1; Gpcr15; C030036C15Rik
Mus musculus	RefSeq	ILMN_194260	ILMN_194260	TRIM47	NM_172570.4	NM_172570.4		217333	148747457	NM_172570.4	Trim47	NP_766158.2	ILMN_2504823	006380524	S	1672	CAGATTGGACCTCTCAAGAAATCGTGCATAACCGTGCTGAAGAGGAGGTG				11qE2	Mus musculus tripartite motif-containing 47 (Trim47), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2210023F24Rik	2210023F24Rik
Mus musculus	MEEBO	ILMN_222376	ILMN_222376	ACTR3	scl074117.1_29				23956221	NM_023735	Actr3		ILMN_2748690	004490274	S	2103	ATGTGATTACCAAAATTGGCATATTTAAGGCCTAATGCCATTCTAATAAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205685	ILMN_205685	E230003H01RIK	ri|E230003H01|PX00208F16|AK053937|2624					AK053937	E230003H01Rik		ILMN_2574465	002190451	S	1962	TTAAGTTGGGCATGGCAGGCAGTTCAGGGCCAGTGAGAGAGGGCTCAGCT										
Mus musculus	RefSeq	ILMN_219739	ILMN_219739	SLC18A1	NM_153054.2	NM_153054.2		110877	79750941	NM_153054.2	Slc18a1	NP_694694.1	ILMN_2712976	000150300	S	2540	GCTAAAATTACTTTAACTTCATCAAATGAAGCCTTCTGGCTTTCCTCATC	8	-	71562135-71562184	8qB3.3	Mus musculus solute carrier family 18 (vesicular monoamine), member 1 (Slc18a1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of a drug, a substance used in the diagnosis, treatment or prevention of a disease, into, out of, within or between cells [goid 15893] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of a drug into, out of, within or between cells. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 15238] [evidence IEA]	Vat1; Vmat1; 4832416I10Rik; MGC28683; MGC37299	Vat1; Vmat1; 4832416I10Rik; MGC28683; MGC37299
Mus musculus	RefSeq	ILMN_213809	ILMN_213809	MYNN	NM_030557.2	NM_030557.2		80732	41056112	NM_030557.2	Mynn	NP_085034.2	ILMN_1218007	001050528	S	2058	GTGGTATTTGTGGGAAAAGTTTTATTTCCTCAGGAGAGCTCAACAAACAC	3	+	30511409-30511458	3qA3	Mus musculus myoneurin (Mynn), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AA415053; Mynr; SBBIZ1; AI661031; AW049392; 2810011C24Rik	AA415053; Mynr; SBBIZ1; AI661031; AW049392; 2810011C24Rik
Mus musculus	RefSeq	ILMN_213809	ILMN_213809	MYNN	NM_030557.2	NM_030557.2		80732	41056112	NM_030557.2	Mynn	NP_085034.2	ILMN_2641013	006330170	S	3726	TCCTGGTGACTGTTTCTCATCTCTGCCATCACTTAGTTAGGTCTCACGCG	3	+	30516988-30517037	3qA3	Mus musculus myoneurin (Mynn), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AA415053; Mynr; SBBIZ1; AI661031; AW049392; 2810011C24Rik	AA415053; Mynr; SBBIZ1; AI661031; AW049392; 2810011C24Rik
Mus musculus	MEEBO	ILMN_217582	ILMN_217582	BC010584	scl16693.12.1_59	XM_110350.4			38049544	XM_110350.4	BC010584		ILMN_2685061	004040553	S	1725	GACAGCAGTGCTCTGTGCCAGTGTTTGACATTACACACCAGACGCCCCTG										
Mus musculus	MEEBO	ILMN_190788	ILMN_190788	SCL0001419.1_32	scl0001419.1_32	AK049832.1			26093657	AK049832.1	scl0001419.1_32		ILMN_2473294	005690243	S	13	GCCACCGAGGAACCGAGGAGAGGCTGAGATCTCCGAACAGCTAAACAATC										
Mus musculus	RefSeq	ILMN_210812	ILMN_210812	ATP10D	NM_153389.2	NM_153389.2		231287	33667090	NM_153389.2	Atp10d	NP_700438.2	ILMN_1235196	004900743	S	5937	CTGGAACTGTCACAAAACCATGTGTCTAAACGAAGCTGCCTTCTGCTTCC	5	+	72689913-72689962	5qC3.2	Mus musculus ATPase, Class V, type 10D (Atp10d), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence NAS]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence NAS]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence NAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]	D5Buc24e; MGC37731; 9830145H18Rik; ATPVD	D5Buc24e; MGC37731; 9830145H18Rik; ATPVD
Mus musculus	MEEBO	ILMN_209673	ILMN_209673	HOXB2	scl0103889.1_67	NM_134032.1			19527249	NM_134032.1	Hoxb2		ILMN_2598083	000360025	S	880	CGGGGGGAATCGGGCCTTCTCCACTCGTGGATACATTTATGCCGTTTTGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process that contributes to the act of creating the structural organization of the facial nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities [goid 21612] [evidence IMP]; The biological process whose specific outcome is the progression of a neural nucleus from its initial condition to its mature state. A neural nucleus is an anatomical structure consisting of a discrete aggregate of neuronal soma [goid 48857] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21569] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21570] [evidence IGI]; The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220019	ILMN_254041	EIF4G1	NM_001005331.1	NM_001005331.1		208643	56699433	NM_001005331.1	Eif4g1	NP_001005331.1	ILMN_2716514	004730136	S	4889	CAGCATTCTTCAATTGGCTTCGTGAGGCTGAGGACGAGGAGTCTGATCAC	16	+	20692449-20692498	16qB1	Mus musculus eukaryotic translation initiation factor 4, gamma 1 (Eif4g1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E030015G23Rik; MGC90776; MGC37551; eIF4GI	E030015G23Rik; MGC90776; MGC37551; eIF4GI
Mus musculus	RefSeq	ILMN_222579	ILMN_236069	E030019B06RIK	XM_916666.2	XM_916666.2		212124	94381387	XM_916666.2	E030019B06Rik	XP_921759.2	ILMN_2751796	004280059	S	3558	CCTGGAGTCTTTGTGAAGCCACTATCCCTAGCTCTACCTCTCTGTGACTC				7qF4	PREDICTED: Mus musculus RIKEN cDNA E030019B06 gene (E030019B06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200973	ILMN_236069	E030019B06RIK	XM_916666.2	XM_916666.2		212124	94381387	XM_916666.2	E030019B06Rik	XP_921759.2	ILMN_1225557	003840189	S	2419	CCCATCACCCCCCAGCTCACCTTCCCAGAAAGCAGAAATCAGATGCCAAC				7qF4	PREDICTED: Mus musculus RIKEN cDNA E030019B06 gene (E030019B06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220342	ILMN_324748	A530053G22RIK	XR_035378.1	XR_035378.1		208079	149255202	XR_035378.1	A530053G22Rik		ILMN_2775763	002320215	S	802	ACAATTGTATAAAACTCTTAAAGATATCAGGTATTTCAATTACTTTTCTT	6	-	60347017-60347066	6qB3	PREDICTED: Mus musculus RIKEN cDNA A530053G22 gene (A530053G22Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_194814	ILMN_245106	ODZ4	NM_011858.3	NM_011858.3		23966	141803394	NM_011858.3	Odz4	NP_035988.2	ILMN_3162820	003060382	I	8673	GAAAGGGCCAAGGCCTGGACTTCTTGCCAAAGACAGCTACTCTTCTGTGG	7	+	104055104-104055153	7qE1	Mus musculus odd Oz/ten-m homolog 4 (Drosophila) (Odz4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		Ten-m4; R75022; mKIAA1302; l7Rn3; l(7)-3Rn; Doc4; ELM2	Ten-m4; R75022; mKIAA1302; l7Rn3; l(7)-3Rn; Doc4; ELM2
Mus musculus	RefSeq	ILMN_194814	ILMN_245106	ODZ4	NM_011858.3	NM_011858.3		23966	141803394	NM_011858.3	Odz4	NP_035988.2	ILMN_1230926	005310497	S	10483	GAAGGTCTCTTACCGCAGGAGAATCGGAGCAGTGTGTAGTTCTGCCTGGC	7	+	104056914-104056963	7qE1	Mus musculus odd Oz/ten-m homolog 4 (Drosophila) (Odz4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		Ten-m4; R75022; mKIAA1302; l7Rn3; l(7)-3Rn; Doc4; ELM2	Ten-m4; R75022; mKIAA1302; l7Rn3; l(7)-3Rn; Doc4; ELM2
Mus musculus	MEEBO	ILMN_188821	ILMN_188821	SLC14A2	scl51241.24.1_205				13507604	NM_030683	Slc14a2		ILMN_2694440	004760612	S	1870	GAGGCTGATTCGTCCCCTCTGCCCAGATCTTTATAACTGCCCGTTGTAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]		Enables the directed movement of urea cross a membrane into, out of, within or between cells. Urea is the water soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle. It is the main nitrogen-containing (urinary) excretion product in ureotelic animals [goid 15204] [evidence IDA]		
Mus musculus	RefSeq	ILMN_243916	ILMN_243916	GM9	NM_001033234.1	NM_001033234.1		194854	85701741	NM_001033234.1	Gm9	NP_001028406.1	ILMN_2931123	002100500	S	1327	CTGGTTCAAAGTACTAATGTCATGTGGCTCATGGCCCCTTGCAACTCTCC	X	-	33640233-33640282	XqA3.3	Mus musculus gene model 9, (NCBI) (Gm9), mRNA.					
Mus musculus	RefSeq	ILMN_209743	ILMN_209743	FSHB	NM_008045.2	NM_008045.2		14308	40254640	NM_008045.2	Fshb	NP_032071.1	ILMN_2598788	007150114	S	1434	GCCTATCTATGTTCTCCTAAAGCTTTTGTTCCTTTCAAATACATCATGAG	2	-	106896408-106896457	2qE3	Mus musculus follicle stimulating hormone beta (Fshb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Fshbeta	Fshbeta
Mus musculus	RefSeq	ILMN_220387	ILMN_211736	DST	NM_134448.2	NM_134448.2		13518	111154075	NM_134448.2	Dst	NP_604443.2	ILMN_2741765	000430270	S	1433	ACGAATGTTCTTCGGTGTACAGCAAAGGACGCATGCTGACCACGGAACAG	1	+	34219892-34219941	1qB	Mus musculus dystonin (Dst), transcript variant b, mRNA.	Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]	The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IMP]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag
Mus musculus	RefSeq	ILMN_211736	ILMN_211736	DST	NM_134448.2	NM_134448.2		13518	111154075	NM_134448.2	Dst	NP_604443.2	ILMN_1251692	005130162	S	10462	GCAGACCTTTCACATACCAAAATGCAGCTGGAAACGACGGCCTTTGACGT	1	+	34252682-34252731	1qB	Mus musculus dystonin (Dst), transcript variant b, mRNA.	Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]	The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IMP]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag
Mus musculus	RefSeq	ILMN_220387	ILMN_211736	DST	NM_134448.2	NM_134448.2		13518	111154075	NM_134448.2	Dst	NP_604443.2	ILMN_2721385	007150215	S	22530	CTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAAGCAGGG	1	+	34364785-34364834	1qB	Mus musculus dystonin (Dst), transcript variant b, mRNA.	Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]	The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IMP]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag
Mus musculus	RefSeq	ILMN_220387	ILMN_211736	DST	NM_134448.2	NM_134448.2		13518	111154075	NM_134448.2	Dst	NP_604443.2	ILMN_2750431	002760291	S	1063	CCGAACGACATCGAGAAGGAGTGGGGCAAACTCATCATCGCCATGCTTGA	1	+	34213671-34213720	1qB	Mus musculus dystonin (Dst), transcript variant b, mRNA.	Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]	The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IMP]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag
Mus musculus	RefSeq	ILMN_220387	ILMN_211736	DST	NM_134448.2	NM_134448.2		13518	111154075	NM_134448.2	Dst	NP_604443.2	ILMN_2758234	005360021	S	22077	TGTGCCCCGAGCAGGTTCTCGGCCATCCACAGCCAAGCCTTCTAAAATCC	1	+	34364332-34364381	1qB	Mus musculus dystonin (Dst), transcript variant b, mRNA.	Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]	The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IMP]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag
Mus musculus	RefSeq	ILMN_220387	ILMN_211736	DST	NM_134448.2	NM_134448.2		13518	111154075	NM_134448.2	Dst	NP_604443.2	ILMN_2777543	002600309	S	23161	AATATGCATTTTAATTTATTATGTATACTCACATACTAGAGAAAGATATT	1	+	34365416-34365465	1qB	Mus musculus dystonin (Dst), transcript variant b, mRNA.	Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]	The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IMP]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag
Mus musculus	RefSeq	ILMN_194194	ILMN_211736	DST	NM_134448.2	NM_134448.2		13518	111154075	NM_134448.2	Dst	NP_604443.2	ILMN_2504251	003460615	S	2514	GCTGGACCTGTCACAGCTGTACTTGCGCTGGATGGCATCTTTCAGATTCC	1	+	34223111-34223150:34223787-34223796	1qB	Mus musculus dystonin (Dst), transcript variant b, mRNA.	Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]	The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IMP]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag
Mus musculus	RefSeq	ILMN_211736	ILMN_211736	DST	NM_134448.2	NM_134448.2		13518	111154075	NM_134448.2	Dst	NP_604443.2	ILMN_1244098	004540113	S	9847	CTCGGAGAACTTTGCAGCGAGCCCCCAGAGCATTCAGAAAGTACATCTGG	1	+	34250019-34250068	1qB	Mus musculus dystonin (Dst), transcript variant b, mRNA.	Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]	The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IMP]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag	ah; nmf339; dt; mKIAA0728; BPAG1-n; BP230; AW554249; athetoid; Bpag1; nmf203; Macf2; 2310001O04Rik; A830042E19Rik; Bpag
Mus musculus	RefSeq	ILMN_199906	ILMN_199906	LOC384054	XM_357391.1	XM_357391.1			38078850	XM_357391.1	LOC384054		ILMN_2536913	002710360	S	37	AAGTCCAGGGTCCGGGAGTCAAAGCCAGTTGTCAACCCAGTCCTGTTCCT										
Mus musculus	Riken	ILMN_206903	ILMN_206903	F830010A05RIK	ri|F830010A05|PL00005I09|AK089708|946					AK089708	F830010A05Rik		ILMN_1239252	007000128	S	693	GCCTCTGTATTTGCAGTCCCAGCACAGGTAAAGTGCTGTCATCTGTGTGC										
Mus musculus	RefSeq	ILMN_196898	ILMN_196898	LOC328083	XM_284961.1	XM_284961.1			28520816	XM_284961.1	LOC328083		ILMN_1248383	003780221	S	242	GCAACAGGTCAGGAGATCACTGTGGCAAGTTCAAGGTGACAGCCTCTGCC										
Mus musculus	MEEBO	ILMN_188226	ILMN_188226	1810064L21RIK	scl45156.8_270						1810064L21Rik		ILMN_2450866	002230041	S	5	CTAAGGTCTCTGTGCCCATGAGGGCACCACCAATAACCTTCTTTACTGGG										
Mus musculus	RefSeq	ILMN_222056	ILMN_235270	UEVLD	NM_001040695.1	NM_001040695.1		54122	104294889	NM_001040695.1	Uevld	NP_001035785.1	ILMN_3161591	000290270	S	3868	AGTAGCAATTGTACGTTCCTCCTCAGTCAGGTGGTGCCATCACAGCCACC	7	-	54179275-54179324	7qB4	Mus musculus UEV and lactate/malate dehyrogenase domains (Uevld), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Attp; 8430408E05Rik	Attp; 8430408E05Rik
Mus musculus	RefSeq	ILMN_218547	ILMN_218547	NKG7	NM_024253.4	NM_024253.4		72310	133892532	NM_024253.4	Nkg7	NP_077215.2	ILMN_1217855	004040035	S	534	CTCAAGTCCAGACATTCTTCTCCTGGTCCTTCTACCTAGGCTGGGTCTCC	7	+	50693208-50693257	7qB4	Mus musculus natural killer cell group 7 sequence (Nkg7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2500004F03Rik	2500004F03Rik
Mus musculus	RefSeq	ILMN_190612	ILMN_249359	4930430E16RIK	NM_028672.1	NM_028672.1		73873	39930452	NM_028672.1	4930430E16Rik	NP_082948.1	ILMN_1219452	003800315	S	68	GTCACCAGCATCCTCAAGAGATGGAGCAAATCAAAGGCAGAGACCTTGGG	11	+	22913454-22913503	11qA3.2	Mus musculus RIKEN cDNA 4930430E16 gene (4930430E16Rik), mRNA.				MGC31583	MGC31583
Mus musculus	RefSeq	ILMN_249359	ILMN_249359	4930430E16RIK	NM_028672.1	NM_028672.1		73873	39930452	NM_028672.1	4930430E16Rik	NP_082948.1	ILMN_2874777	005290484	S	1603	CGAGGGCGGGAGCAAGCCATCAGAAGGAGTGAAAAGGCCAGGATGAGAGA	11	+	22921111-22921133:22923430-22923456	11qA3.2	Mus musculus RIKEN cDNA 4930430E16 gene (4930430E16Rik), mRNA.				MGC31583	MGC31583
Mus musculus	RefSeq	ILMN_200886	ILMN_200886	LOC381891	XM_355907.1	XM_355907.1			38086826	XM_355907.1	LOC381891		ILMN_1245979	005810519	S	286	TACCCAATGGTAGCACCTAAAATAAGTGGTCCCCAGCACTGCAGATCCGC										
Mus musculus	RefSeq	ILMN_214224	ILMN_241585	ADAMTS1	NM_009621.3	NM_009621.3		11504	47087139	NM_009621.3	Adamts1	NP_033751.2	ILMN_2761082	001450368	S	3051	CACCCTGCTTCCGAATGTGCAAAGGAAGTGAAGCCAGCCAGTACCAGACC	16	-	85795841-85795890	16qC3.3	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 (Adamts1), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence ISO]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IMP]	METH-1; C3-C5; METH1; ADAM-TS1; ADAMTS	METH-1; C3-C5; METH1; ADAM-TS1; ADAMTS
Mus musculus	RefSeq	ILMN_214224	ILMN_241585	ADAMTS1	NM_009621.3	NM_009621.3		11504	47087139	NM_009621.3	Adamts1	NP_033751.2	ILMN_1230129	005260725	S	4529	GGAGTGGGATTAACTTCTGGGCAAGAAATCTGATGAGACACAAACATTGG	16	-	85794363-85794412	16qC3.3	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 (Adamts1), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence ISO]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IMP]	METH-1; C3-C5; METH1; ADAM-TS1; ADAMTS	METH-1; C3-C5; METH1; ADAM-TS1; ADAMTS
Mus musculus	MEEBO	ILMN_188666	ILMN_188666	MTDNA_COXIII	mtDNA_COXIII						mtDNA_COXIII		ILMN_2454649	005360367	S	20	CCATGACCATTAACTGGAGCCTTTTCAGCCCTCCTTCTAACATCAGGTCT										
Mus musculus	RefSeq	ILMN_221242	ILMN_221242	GLOD4	NM_026029.2	NM_026029.2		67201	142343963	NM_026029.2	Glod4	NP_080305.1	ILMN_1243609	002230279	S	1073	CACTCTTGGTAGAGGCAAATTCCTACTGTGTGTAATTGTATTAAATTTGG	11	-	76035254-76035303	11qB5	Mus musculus glyoxalase domain containing 4 (Glod4), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			1700082G03Rik; RP23-147P4.6; 2700085E05Rik; C81254	1700082G03Rik; RP23-147P4.6; 2700085E05Rik; C81254
Mus musculus	RefSeq	ILMN_187610	ILMN_325201	LOC100045439	XM_001474279.1	XM_001474279.1		100045439	149255521	XM_001474279.1	LOC100045439	XP_001474329.1	ILMN_1231651	000240546	S	2330	GCTCAGGAAGGCACAATTGACACCTCCTCCCTCTGTGTGTCTTGTGGTCA					PREDICTED: Mus musculus similar to testis-specific adriamycin sensitivity protein (LOC100045439), mRNA.					
Mus musculus	RefSeq	ILMN_197749	ILMN_197749	LOC268816	XM_193811.2	XM_193811.2			38077792	XM_193811.2	LOC268816		ILMN_2529235	007050315	S	1981	GGGTCTACCAGCTACAGAAGAGCATGGTGGGACACAGACCAACAGTGTGC										
Mus musculus	RefSeq	ILMN_217684	ILMN_217684	SULT2B1	NM_017465.1	NM_017465.1		54200	8567407	NM_017465.1	Sult2b1	NP_059493.1	ILMN_2686353	006370576	S	945	TGTTTACCGAGAGCAAATGCACGGGGTGCAGAGGTTCCCCTGGGACACGT	7	-	52985461-52985510	7qB4	Mus musculus sulfotransferase family, cytosolic, 2B, member 1 (Sult2b1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds [goid 103] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + an alcohol = adenosine 3',5'-bisphosphate + an alkyl sulfate [goid 4027] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IDA]	SULT2B; BB173635; AI326997	SULT2B; BB173635; AI326997
Mus musculus	RefSeq	ILMN_217684	ILMN_217684	SULT2B1	NM_017465.1	NM_017465.1		54200	8567407	NM_017465.1	Sult2b1	NP_059493.1	ILMN_2791179	001410524	S	859	CACCGCCAGGGGGAGTTCCTGCGCAAAGGGATCAGTGGCGACTGGAAGAA	7	-	52985547-52985569:52986608-52986634	7qB4	Mus musculus sulfotransferase family, cytosolic, 2B, member 1 (Sult2b1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds [goid 103] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + an alcohol = adenosine 3',5'-bisphosphate + an alkyl sulfate [goid 4027] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IDA]	SULT2B; BB173635; AI326997	SULT2B; BB173635; AI326997
Mus musculus	RefSeq	ILMN_217684	ILMN_217684	SULT2B1	NM_017465.1	NM_017465.1		54200	8567407	NM_017465.1	Sult2b1	NP_059493.1	ILMN_2766827	006110181	S	27	CGCACCTGGCCCCGACGCCCGGCTACCTCCTGCCCTGCCCGCCATGGACG	7	-	53014816-53014823:53014824-53014865	7qB4	Mus musculus sulfotransferase family, cytosolic, 2B, member 1 (Sult2b1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds [goid 103] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + an alcohol = adenosine 3',5'-bisphosphate + an alkyl sulfate [goid 4027] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IDA]	SULT2B; BB173635; AI326997	SULT2B; BB173635; AI326997
Mus musculus	RefSeq	ILMN_209467	ILMN_209467	GBX2	NM_010262.3	NM_010262.3		14472	133892275	NM_010262.3	Gbx2	NP_034392.1	ILMN_1249766	006580138	S	1987	CCTGGCCTTGTATATCCTATCTGAGCCATGTCGGAAGCACGTCTCCGTTG	1	-	91824626-91824675	1qD	Mus musculus gastrulation brain homeobox 2 (Gbx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands [goid 48483] [evidence IMP]; The process by which the anatomical structures of a tube are generated and organized. Morphogenesis pertains to the creation of form. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system [goid 35239] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The multiplication or reproduction of neuroblasts that will give rise to granule cells. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21930] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 2 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21568] [evidence IMP]; The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages [goid 30917] [evidence IMP]; The process by which the anatomical structure of the midbrain-hindbrain boundary is generated and organized. Morphogenesis pertains to the creation of form. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate [goid 21555] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Stra7; Gbx-2; D130058E05Rik; MMoxA	Stra7; Gbx-2; D130058E05Rik; MMoxA
Mus musculus	RefSeq	ILMN_197285	ILMN_197285	LOC218432	XM_127452.2	XM_127452.2			38074968	XM_127452.2	LOC218432		ILMN_1228341	004200598	S	562	CCCAAAGATGAACACAGGGCCAGATACAGAATACACAGTATTTGCTGCAG										
Mus musculus	RefSeq	ILMN_220751	ILMN_220751	RPP21	NM_026308.2	NM_026308.2		67676	142385016	NM_026308.2	Rpp21	NP_080584.1	ILMN_2726308	004730538	S	431	CAGACTCAGGCTTTGAACACCAGTGAATGACTTCACTCCACTTGCCAGAT	17	-	36460357-36460377:36460378-36460406	17qB1	Mus musculus ribonuclease P 21 subunit (human) (Rpp21), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]	0610037N01Rik	0610037N01Rik
Mus musculus	RefSeq	ILMN_222216	ILMN_314146	4921511C20RIK	NR_003646.1	NR_003646.1		245598	153791337	NR_003646.1	4921511C20Rik		ILMN_1257893	000290091	S	1308	GGAAGCAATTGACCATATCTTTGATCTTGAGAAGTATTACCTTTCAGCCC				XqE3	Mus musculus RIKEN cDNA 4921511C20 gene (4921511C20Rik), non-coding RNA.				Gm383	Gm383
Mus musculus	RefSeq	ILMN_215173	ILMN_215173	PITX1	NM_011097.2	NM_011097.2		18740	118130224	NM_011097.2	Pitx1	NP_035227.1	ILMN_2656380	005310392	S	1469	AGGCTCACAGAAGGGAGCGCGCGGGAGCACGCGGGGCGCTCGCAGCTCCT	13	-	55927344-55927393	13qB1	Mus musculus paired-like homeodomain transcription factor 1 (Pitx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IMP]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IDA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; The process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure. The branchiomeric muscle is derived from cranial mesoderm and controls facial expression, pharyngeal and laryngeal function, operating the jaw. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. Branchiomeric muscles of mammals correspond to the gill musculature of fish [goid 14707] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a myoblast cell. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 48625] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	P-OTX; Potx; Bft; Ptx1	P-OTX; Potx; Bft; Ptx1
Mus musculus	RefSeq	ILMN_220639	ILMN_220639	INSM2	NM_020287.1	NM_020287.1		56856	9938005	NM_020287.1	Insm2	NP_064683.1	ILMN_2891445	003180309	S	1232	ACATTCGAGAGAAGCACCGGCTATGGCACGCTGTCCGCGAGGAGCTGCTA	12	+	56701691-56701740	12qC1	Mus musculus insulinoma-associated 2 (Insm2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Mlt1	Mlt1
Mus musculus	RefSeq	ILMN_207524	ILMN_207524	A930006D20RIK	XM_128379.5	XM_128379.5			38080042	XM_128379.5	A930006D20Rik		ILMN_2587969	003400152	I	41	GAGGAGGCTTTTTAACAGCAGGAACTTACCCAATAGCAATCATCTTAGGG										
Mus musculus	RefSeq	ILMN_218606	ILMN_218606	RNF130	NM_021540.3	NM_021540.3		59044	133892292	NM_021540.3	Rnf130	NP_067515.2	ILMN_1249569	002680431	S	941	GTGGATCCCTGGCTCAGTGAACACTGTACCTGTCCTATGTGCAAACTTAA	11	+	49907247-49907296	11qB1.3	Mus musculus ring finger protein 130 (Rnf130), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	G1RZFP; G1rp; 2510042A13Rik; GOLIATH; GP	G1RZFP; G1rp; 2510042A13Rik; GOLIATH; GP
Mus musculus	MEEBO	ILMN_186755	ILMN_186755	1300002E11RIK	scl071751.8_56				51829988	XM_484537	1300002E11Rik		ILMN_2438234	006860494	S	13	CTCGCTGCATTCAGAGGAATCTTCTTTTTGATCCTCTGCTTTAAGTCCTT										
Mus musculus	RefSeq	ILMN_250244	ILMN_250244	OLFR519	NM_207160.1	NM_207160.1		277935	53850578	NM_207160.1	Olfr519	NP_997043.1	ILMN_2854265	006960546	S	462	GACAGCTGTTTTGTCAGTCACATGGGTGGCTAGCTTTCCCTACTGTGACC	7	-	116037408-116037457	7qE3	Mus musculus olfactory receptor 519 (Olfr519), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR268-6	MOR268-6
Mus musculus	RefSeq	ILMN_220867	ILMN_220867	KLHL8	NM_178741.2	NM_178741.2		246293	31343369	NM_178741.2	Klhl8	NP_848856.1	ILMN_2943176	007610328	S	2680	TGTCTGTAAGAAGGCCTTCGCTTCCATTTCGAGTTTCAGAACTACAGGAC	5	-	104102785-104102834	5qE5	Mus musculus kelch-like 8 (Drosophila) (Klhl8), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC102224; D5Ertd431e; 2310001P09Rik	MGC102224; D5Ertd431e; 2310001P09Rik
Mus musculus	RefSeq	ILMN_218115	ILMN_218115	ANO7	NM_207031.1	NM_207031.1		404545	46309608	NM_207031.1	Ano7	NP_996914.1	ILMN_2914519	002340274	S	2782	GAGGTCACAGTAGGGGTTACCGGAGGCTGACACACTTGCCTGGAAGACTG	1	+	95299644-95299693	1qD	Mus musculus anoctamin 7 (Ano7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]			Pcanap5; IPCA-5; NGEP-L; NGEP	Pcanap5; IPCA-5; NGEP-L; NGEP
Mus musculus	Riken	ILMN_203020	ILMN_203020	6030436K07RIK	ri|6030436K07|PX00056H20|AK031463|2597					AK031463	6030436K07Rik		ILMN_1250780	006250242	S	2472	AGCAGAATTAAGATGCTTAGCAGAGCACAGTTGGGCGACAGGTTCCCCCC										
Mus musculus	RefSeq	ILMN_187432	ILMN_236517	MAN1A2	NM_010763.1	NM_010763.1		17156	6754619	NM_010763.1	Man1a2	NP_034893.1	ILMN_2657556	006760373	S	3259	GCTTTTACAACTTACTAAAGCAAAGGCAAAACATAGCAATGTCCCTTGAG	3	-	100391851-100391860:100394948-100394987	3qF2.2	Mus musculus mannosidase, alpha, class 1A, member 2 (Man1a2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The chemical reactions and pathways involving glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9100] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]	AI854422; PCR2; Man1b; AI528764; AI428775	AI854422; PCR2; Man1b; AI528764; AI428775
Mus musculus	RefSeq	ILMN_236517	ILMN_236517	MAN1A2	NM_010763.1	NM_010763.1		17156	6754619	NM_010763.1	Man1a2	NP_034893.1	ILMN_2843029	001050176	S	3027	CGCTAGCATTGGGAGCATGATGGAAGGAGGGAAGGTGCCAGATTGTTGCC	3	-	100395862-100395871:100420488-100420527	3qF2.2	Mus musculus mannosidase, alpha, class 1A, member 2 (Man1a2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The chemical reactions and pathways involving glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9100] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]	AI854422; PCR2; Man1b; AI528764; AI428775	AI854422; PCR2; Man1b; AI528764; AI428775
Mus musculus	RefSeq	ILMN_187432	ILMN_236517	MAN1A2	NM_010763.1	NM_010763.1		17156	6754619	NM_010763.1	Man1a2	NP_034893.1	ILMN_1241339	005290132	S	1918	GCCGTGGCTGTGCGGCAGGCTGAAAAGTATTACATCCTTCGTCCAGAAGT	3	-	100456148-100456171:100456462-100456487	3qF2.2	Mus musculus mannosidase, alpha, class 1A, member 2 (Man1a2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The chemical reactions and pathways involving glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9100] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]	AI854422; PCR2; Man1b; AI528764; AI428775	AI854422; PCR2; Man1b; AI528764; AI428775
Mus musculus	RefSeq	ILMN_217640	ILMN_217640	BANF1	NM_011793.2	NM_011793.2		23825	31981404	NM_011793.2	Banf1	NP_035923.1	ILMN_2745971	000650373	S	17	TTGAGGTCTGGGCGGGAGCGGCCGAGTGGCGCGAGGAGCCGTTACCAGAG	19	-	5366579-5366628	19qA	Mus musculus barrier to autointegration factor 1 (Banf1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The molecular events that lead to the integration of a viral genome into the host genome [goid 19047] [evidence TAS]; The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]	Bcrp1; Baf; L2bp1/Baf; C78287	Bcrp1; Baf; L2bp1/Baf; C78287
Mus musculus	RefSeq	ILMN_217640	ILMN_217640	BANF1	NM_011793.2	NM_011793.2		23825	31981404	NM_011793.2	Banf1	NP_035923.1	ILMN_2685806	004200615	S	152	TGGGGAGCCTGGCCGGGATTGGTGACGTCCTGAGCAAGAGGCTGGAGGAA	19	-	5365833-5365882	19qA	Mus musculus barrier to autointegration factor 1 (Banf1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The molecular events that lead to the integration of a viral genome into the host genome [goid 19047] [evidence TAS]; The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]	Bcrp1; Baf; L2bp1/Baf; C78287	Bcrp1; Baf; L2bp1/Baf; C78287
Mus musculus	RefSeq	ILMN_209493	ILMN_209493	D6WSU163E	NM_138594.2	NM_138594.2		28040	31981666	NM_138594.2	D6Wsu163e	NP_613060.1	ILMN_2958894	007210722	S	1884	CACGTCACAGACCAGAAGCCAGCTCCCAACTGAAGCATTTACTCAGTCCC	6	+	126940969-126941018	6qF3	Mus musculus DNA segment, Chr 6, Wayne State University 163, expressed (D6Wsu163e), mRNA.				C12orf4	C12orf4
Mus musculus	RefSeq	ILMN_217898	ILMN_217898	NDUFA1	NM_019443.2	NM_019443.2		54405	110556627	NM_019443.2	Ndufa1	NP_062316.1	ILMN_1251370	003890739	S	257	CGAGTTGCTCGTGTTCAGTACCAGTGGTATCTGATGGAACGCGATAGACG	X	-	34729902-34729951	XqA3.3	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 (Ndufa1), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		MWFE; 1810049F12Rik	MWFE; 1810049F12Rik
Mus musculus	RefSeq	ILMN_211144	ILMN_211144	ISLR	NM_012043.2	NM_012043.2		26968	31982747	NM_012043.2	Islr	NP_036173.1	ILMN_2613000	003440341	S	1880	AAGGGGGTCTGGAGTGGCCAGTACAGGATCTGGAAAGGAGGTACCACGGG	9	-	57954619-57954668	9qB	Mus musculus immunoglobulin superfamily containing leucine-rich repeat (Islr), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW553146	AW553146
Mus musculus	RefSeq	ILMN_233884	ILMN_233884	OLFR191	NM_001011807.1	NM_001011807.1		258035	58801379	NM_001011807.1	Olfr191	NP_001011807.1	ILMN_3160314	004040367	S	313	GTAGTGAGTGCAACCACGGAATGTTTTCTCTTGGCAGCAATGGCCTATGA	16	-	59085945-59085994	16qC1.3	Mus musculus olfactory receptor 191 (Olfr191), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR183-5P	MOR183-5P
Mus musculus	RefSeq	ILMN_212835	ILMN_212835	OLIG3	NM_053008.2	NM_053008.2		94222	111118998	NM_053008.2	Olig3	NP_443734.2	ILMN_1234377	006980048	S	1841	CTGCATGCGGGGTTGGGTCGGTTACCCCTCAGCTTTGAAAACACACTGGG	10	+	19078185-19078234	10qA3	Mus musculus oligodendrocyte transcription factor 3 (Olig3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Bhlhb7	Bhlhb7
Mus musculus	Riken	ILMN_207220	ILMN_207220	DTNB	ri|D730008I19|PX00673H15|AK085675|1630					AK085675	Dtnb		ILMN_1235193	002060360	S	1490	GTGTGGCTGGATTCTCACCTCCAGACCCCTCGAACCTGGCATAAGGTGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196670	ILMN_196670	FER1L3	XM_283556.2	XM_283556.2			38085048	XM_283556.2	Fer1l3		ILMN_2525314	004280762	S	3818	AGGGGGAGTAGGATTAGAGTAAGCAGATGAGTAGGGTCCAGGTGAGAGAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_197471	ILMN_320782	LOC633238	XR_034121.1	XR_034121.1		633238	149265650	XR_034121.1	LOC633238		ILMN_1239723	003460519	S	1112	ACACTAACGGAACTGGCCATCCAGGGAACCAGGACAGCGGCCACGCACAA	14	+	51979389-51979438	14qC1	PREDICTED: Mus musculus similar to cyclin-dependent kinase 8 (LOC633238), misc RNA.					
Mus musculus	RefSeq	ILMN_212663	ILMN_212663	OLFR1316	NM_146742.1	NM_146742.1		258737	22129360	NM_146742.1	Olfr1316	NP_666953.1	ILMN_2821817	003310440	S	774	TGTCTATACATGGCCTACTCCCTCCGTACACCTGGATAAATTTCTGGCCA	2	-	111970149-111970198	2qE3	Mus musculus olfactory receptor 1316 (Olfr1316), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR245-26; MOR245-1	MOR245-26; MOR245-1
Mus musculus	RefSeq	ILMN_212663	ILMN_212663	OLFR1316	NM_146742.1	NM_146742.1		258737	22129360	NM_146742.1	Olfr1316	NP_666953.1	ILMN_1225034	006220390	S	784	GGCCTACTCCCTCCGTACACCTGGATAAATTTCTGGCCATATTTGATGCA	2	-	111970139-111970188	2qE3	Mus musculus olfactory receptor 1316 (Olfr1316), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR245-26; MOR245-1	MOR245-26; MOR245-1
Mus musculus	RefSeq	ILMN_198840	ILMN_198840	LOC245187	XM_142713.2	XM_142713.2			38088912	XM_142713.2	LOC245187		ILMN_2533110	003850392	S	504	GGTGTCCAGCCGAGGCCCAGACCCTCCTGCAAAGGTGCCTCGAGAGGAGT										
Mus musculus	MEEBO	ILMN_208971	ILMN_208971	PLEC1	scl0002460.1_29				41322934	NM_201391	Plec1		ILMN_2591321	000670521	S	210	AGTCGTGGGTCATGTTGTCACTCTGGCTGCCGTATGGCACTGGCGTAAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	Riken	ILMN_205678	ILMN_205678	PDE4B	ri|D030072C22|PX00182C10|AK051102|2130					AK051102	Pde4b		ILMN_2574417	003870026	S	1589	ATCATTCCTTTGCTTTCTCCACGCATGGGCTCTCAAGTGAGGTATTAAGC							A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]	Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence ISS]		
Mus musculus	RefSeq	ILMN_253937	ILMN_253937	1700081D17RIK	NM_028560.1	NM_028560.1		73523	62857900	NM_028560.1	1700081D17Rik	NP_082836.1	ILMN_3021142	003890309	I	783	TCCTGCAGCAATATGGGCTGAGAGATCCCGACACAAGCACCCAGTTCATG	14	+	68794702-68794751	14qD2	Mus musculus RIKEN cDNA 1700081D17 gene (1700081D17Rik), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]			AI429082; 1700051A02Rik	AI429082; 1700051A02Rik
Mus musculus	RefSeq	ILMN_185340	ILMN_239931	ALK	NM_007439.2	NM_007439.2		11682	110347474	NM_007439.2	Alk	NP_031465.2	ILMN_2769925	004640341	S	5768	CCCCTAAGGCTTCTTTCCGATTTTTGTGTGCGCTCTGCTTCCGCGTAGTC	17	-	72218428-72218477	17qE1.3	Mus musculus anaplastic lymphoma kinase (Alk), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence ISS]	CD246; Tcrz	CD246; Tcrz
Mus musculus	RefSeq	ILMN_219538	ILMN_250235	DDX3X	NM_010028.2	NM_010028.2		13205	118129795	NM_010028.2	Ddx3x	NP_034158.1	ILMN_2710166	000360100	S	3103	CAGCAGGCTTTATTTTAAATGCCGATTCACATTACTCTGTTCAAGCTGCG	X	+	12869657-12869706	XqA1.1	Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked (Ddx3x), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	Fin14; Ddx3; D1Pas1-rs2	Fin14; Ddx3; D1Pas1-rs2
Mus musculus	RefSeq	ILMN_212274	ILMN_212274	RAB24	NM_009000.2	NM_009000.2		19336	31560646	NM_009000.2	Rab24	NP_033026.1	ILMN_2624647	003120681	S	871	CTACAGCTGTTGTCATCACTGAGTCACCAGTCATCTGGCCCAGTGGAATT	13	-	55421482-55421510:55421511-55421531	13qB1	Mus musculus RAB24, member RAS oncogene family (Rab24), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	6530406O07Rik	6530406O07Rik
Mus musculus	RefSeq	ILMN_212274	ILMN_212274	RAB24	NM_009000.2	NM_009000.2		19336	31560646	NM_009000.2	Rab24	NP_033026.1	ILMN_2946440	000150136	S	862	CCCTTACTTCTACAGCTGTTGTCATCACTGAGTCACCAGTCATCTGGCCC	13	-	55421491-55421510:55421511-55421540	13qB1	Mus musculus RAB24, member RAS oncogene family (Rab24), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	6530406O07Rik	6530406O07Rik
Mus musculus	MEEBO	ILMN_215117	ILMN_215117	9530056K15RIK	scl25804.1.1_46	NM_177218.2			31343096	NM_177218.2	9530056K15Rik		ILMN_1260155	005860681	S	1962	AAAAGGAAACTTCCCCTAGCAAACTGTCTAGACTTGAGTCATGAGCTGTC										
Mus musculus	Riken	ILMN_205405	ILMN_205405	PTPRG	ri|E130003N22|PX00207G04|AK053271|2596					AK053271	Ptprg		ILMN_2572307	004900064	S	2241	CAGTCTTTCCGCCTCAGCATTTCCGCCTGTACTCTCACGACACAGACCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]		
Mus musculus	Riken	ILMN_205516	ILMN_205516	D130050K19RIK	ri|D130050K19|PX00184I16|AK051465|775					AK051465	D130050K19Rik		ILMN_1245298	000110739	S	427	TAGGCAGGACAGCGCCAGAATGGGCGAAAGGGAGAATGGGCCAGTGGATA										
Mus musculus	Riken	ILMN_204815	ILMN_204815	PARN	ri|C630002G12|PX00083D05|AK049829|2275					AK049829	Parn		ILMN_1220936	005390470	S	2110	GAGTTTTTCAGTTATGGGTCATGTGACGCTATCATGTCCCCTGGCAGTTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP [goid 4535] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187101	ILMN_256875	SUFU	NM_001025391.1	NM_001025391.1		24069	70794806	NM_001025391.1	Sufu	NP_001020562.1	ILMN_2636718	001240440	S	1571	CAGCTGGCCTGAGAAGAAACTCAAAGTGTCCATTCTCCCCGACGTGGTGT	19	+	46560365-46560414	19qC3	Mus musculus suppressor of fused homolog (Drosophila) (Sufu), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IMP]; The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 42994] [evidence IGI]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810026F04Rik; Su(fu)	2810026F04Rik; Su(fu)
Mus musculus	RefSeq	ILMN_209959	ILMN_209959	B230399E16RIK	NM_173770.4	NM_173770.4		240479	146198871	NM_173770.4	B230399E16Rik	NP_776131.1	ILMN_1230753	005130523	S	2081	TTTTTCCCCCCTGGAATTAAATGCAATAAAATGTGTGTCCTTAGCGGCAC				18qE4	Mus musculus RIKEN cDNA B230399E16 gene (B230399E16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210286	ILMN_210286	EFTUD2	NM_011431.2	NM_011431.2		20624	24475933	NM_011431.2	Eftud2	NP_035561.1	ILMN_2604097	000360280	S	2632	ACCATCAAAGCGTTCATCCCGGCCATCGACTCATTCGGCTTTGAGACTGA	11	-	102700791-102700840	11qE1	Mus musculus elongation factor Tu GTP binding domain containing 2 (Eftud2), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	U5-116kD; Snrp116; 116kDa	U5-116kD; Snrp116; 116kDa
Mus musculus	RefSeq	ILMN_210286	ILMN_210286	EFTUD2	NM_011431.2	NM_011431.2		20624	24475933	NM_011431.2	Eftud2	NP_035561.1	ILMN_2930364	003360121	S	3051	CATCCCAGTGAGGAAGGGGCATCTGGCCTGGTTTCTTCTGTGGCCTTTGC	11	-	102699957-102700006	11qE1	Mus musculus elongation factor Tu GTP binding domain containing 2 (Eftud2), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	U5-116kD; Snrp116; 116kDa	U5-116kD; Snrp116; 116kDa
Mus musculus	RefSeq	ILMN_210286	ILMN_210286	EFTUD2	NM_011431.2	NM_011431.2		20624	24475933	NM_011431.2	Eftud2	NP_035561.1	ILMN_2669441	005550097	S	3089	TGTGGCCTTTGCCTGGCCCCATTCCCAAGGAACAGAGGAGAGCTTGGGCC	11	-	102699919-102699968	11qE1	Mus musculus elongation factor Tu GTP binding domain containing 2 (Eftud2), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	U5-116kD; Snrp116; 116kDa	U5-116kD; Snrp116; 116kDa
Mus musculus	RefSeq	ILMN_220127	ILMN_220127	SERPINA5	NM_172953.1	NM_172953.1		268591	27370467	NM_172953.1	Serpina5	NP_766541.1	ILMN_2999329	003390129	S	2061	GCTGAGGTGGTGTGATAGAGGTCTGTGGTAAACAGCAGAACTTAGGGTGC	12	+	104507086-104507135	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 5 (Serpina5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	4933415L04; Pci; PAI-3	4933415L04; Pci; PAI-3
Mus musculus	RefSeq	ILMN_196155	ILMN_250989	NNAT	NM_180960.2	NM_180960.2		18111	123701831	NM_180960.2	Nnat	NP_851291.1	ILMN_1232456	002360541	S	807	TTCCCCCCGCCTTCGAAAGCCCTCCCCAAAATGTGTCACTTGATTTGGAT	2	+	157387933-157387982	2qH1	Mus musculus neuronatin (Nnat), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [evidence IMP]		AW107673; Peg5; 5730414I02Rik	AW107673; Peg5; 5730414I02Rik
Mus musculus	RefSeq	ILMN_215978	ILMN_215978	FAM18B	NM_026210.2	NM_026210.2		67510	31981030	NM_026210.2	Fam18b	NP_080486.1	ILMN_2665943	007330209	S	1583	GATTCTTTTGTAGTATTGTAAATTTTGTTGGAATCTTTATATTATGTCAT	11	+	62711214-62711263	11qB2	Mus musculus family with sequence similarity 18, member B (Fam18b), mRNA.				RP23-428I5.3; 1810036I24Rik	RP23-428I5.3; 1810036I24Rik
Mus musculus	RefSeq	ILMN_232839	ILMN_232839	4933421E11RIK	NM_028081.2	NM_028081.2		321000	87162479	NM_028081.2	4933421E11Rik	NP_082357.2	ILMN_3082287	000840484	A	1195	CCCACCTGTCAGGGATCCCCACTGGATGCCTGAAACTGGAGATGATACCA	3	+	106538810-106538859	3qF2.3	Mus musculus RIKEN cDNA 4933421E11 gene (4933421E11Rik), transcript variant 2, mRNA.				AI450568; 2010012G17Rik; Rif1	AI450568; 2010012G17Rik; Rif1
Mus musculus	RefSeq	ILMN_208822	ILMN_322147	LOC100048845	XM_001479169.1	XM_001479169.1		100048845	149234090	XM_001479169.1	LOC100048845	XP_001479219.1	ILMN_2591361	000940161	S	3857	GCACAGTAGTGTGGGTTCTCTCAGGACTTGTGAATGAGTTTATGCTCTCT	1	+	60694214-60694263		PREDICTED: Mus musculus similar to CD28 antigen (LOC100048845), mRNA.					
Mus musculus	RefSeq	ILMN_208822	ILMN_322147	LOC100048845	XM_001479169.1	XM_001479169.1		100048845	149234090	XM_001479169.1	LOC100048845	XP_001479219.1	ILMN_2589865	006250730	S	341	CAACTGCGACGGGGATTTCGACAACGAAACAGTGACGTTCCGTCTCTGGA	1	+	60684519-60684568		PREDICTED: Mus musculus similar to CD28 antigen (LOC100048845), mRNA.					
Mus musculus	RefSeq	ILMN_211924	ILMN_233545	IAH1	NM_026347.3	NM_026347.3		67732	71067105	NM_026347.3	Iah1	NP_080623.2	ILMN_2620803	007400437	S	423	TCATCCTTATCACGCCACCCCCGCTCTGCGAAGCCGCCTGGGAGAAGGAG	12	+	21325730-21325779	12qA1.3	Mus musculus isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) (Iah1), mRNA.		The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	1500019E20Rik; 4833421E05Rik	1500019E20Rik; 4833421E05Rik
Mus musculus	Riken	ILMN_205961	ILMN_205961	C230079O04RIK	ri|C230079O04|PX00176G02|AK048900|2829					AK048900	C230079O04Rik		ILMN_2576502	006250575	S	2357	GGGGCTTCAGTATTGGCTACATTCCAGCTACAGTATTAACAGTGGACTCC										
Mus musculus	MEEBO	ILMN_192820	ILMN_192820	LRRIQ2	scl48389.2_565				45433567	NM_028815	Lrriq2		ILMN_2750904	004760682	S	328	TGGCTGCGTGGAAGGCCTGAAGGACCTAGTCCATTTGGAGTGGCTGAATT										
Mus musculus	MEEBO	ILMN_192820	ILMN_192820	LRRIQ2	scl48389.2_565				45433567	NM_028815	Lrriq2		ILMN_2750905	001260414	S	329	GGCTGCGTGGAAGGCCTGAAGGACCTAGTCCATTTGGAGTGGCTGAATTT										
Mus musculus	RefSeq	ILMN_190798	ILMN_190798	ZDHHC9	NM_172465.3	NM_172465.3		208884	146149169	NM_172465.3	Zdhhc9	NP_766053.1	ILMN_2473374	003450427	S	2892	CTGGATGACTTACGGGGACAGGGAGGGGTGCAAACCACGACTTTTAATCT				XqA4	Mus musculus zinc finger, DHHC domain containing 9 (Zdhhc9), mRNA. XM_921756 XM_921763	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	6430508G22; 9530098M12Rik	6430508G22; 9530098M12Rik
Mus musculus	RefSeq	ILMN_221290	ILMN_221290	KCNMB2	NM_028231.2	NM_028231.2		72413	31560079	NM_028231.2	Kcnmb2	NP_082507.1	ILMN_1259717	003830373	S	2401	CAAATCATTTGTGGAATGAACGGTGAAACTTATCTGAGGAAGCAGAATAT	3	+	32098584-32098633	3qA3	Mus musculus potassium large conductance calcium-activated channel, subfamily M, beta member 2 (Kcnmb2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	MGC57945; 2700049B16Rik; 3110031N04Rik	MGC57945; 2700049B16Rik; 3110031N04Rik
Mus musculus	RefSeq	ILMN_221290	ILMN_221290	KCNMB2	NM_028231.2	NM_028231.2		72413	31560079	NM_028231.2	Kcnmb2	NP_082507.1	ILMN_2733544	002510687	S	55	GAGCGAGGAGTAAAGCTATGAGTTAGCGAGGGTGTGACATCAATGGTCCA	3	+	31801679-31801728	3qA3	Mus musculus potassium large conductance calcium-activated channel, subfamily M, beta member 2 (Kcnmb2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	MGC57945; 2700049B16Rik; 3110031N04Rik	MGC57945; 2700049B16Rik; 3110031N04Rik
Mus musculus	Riken	ILMN_205084	ILMN_205084	D630018J02RIK	ri|D630018J02|PX00196G20|AK052669|3249					AK052669	D630018J02Rik		ILMN_1214566	002030148	S	2955	GAGAGTGAACAAAAGTCAGAGTCCCCAGCATTGCCTTCACCCAGGAGCAG										
Mus musculus	RefSeq	ILMN_213726	ILMN_213726	NMRAL1	NM_026393.1	NM_026393.1		67824	24431936	NM_026393.1	Nmral1	NP_080669.1	ILMN_1239181	006450072	S	946	ACACCCTGAAACCTGATCGGAACATTCATCTGACCCTGCGACTCAACCCC	16	-	4711483-4711532	16qA1	Mus musculus NmrA-like family domain containing 1 (Nmral1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the frequency, rate or extent of nitrogen utilization [goid 6808] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1110025F24Rik; AI256624	1110025F24Rik; AI256624
Mus musculus	RefSeq	ILMN_214967	ILMN_214967	NUP133	NM_172288.1	NM_172288.1		234865	26986606	NM_172288.1	Nup133	NP_758492.1	ILMN_2719266	001010224	S	3542	GAGTATTATGTCCAAGGACAGATGTGACATTTGTAGAAATGGTTGTTTCT	8	-	126423250-126423273:126423274-126423299	8qE2	Mus musculus nucleoporin 133 (Nup133), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence ISS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [evidence ISS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of RNA, ribonucleic acids, into, out of, within or between cells [goid 50658] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube [goid 48339] [evidence IMP]	Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence ISS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4832420O05Rik	4832420O05Rik
Mus musculus	RefSeq	ILMN_214967	ILMN_214967	NUP133	NM_172288.1	NM_172288.1		234865	26986606	NM_172288.1	Nup133	NP_758492.1	ILMN_2981689	006370288	S	3283	AGATGTGAGCATTGATGACCTGAAGCTGGAGATTCTGTGCAGAGCACTGC	8	-	126428461-126428510	8qE2	Mus musculus nucleoporin 133 (Nup133), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence ISS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [evidence ISS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of RNA, ribonucleic acids, into, out of, within or between cells [goid 50658] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube [goid 48339] [evidence IMP]	Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence ISS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4832420O05Rik	4832420O05Rik
Mus musculus	RefSeq	ILMN_214967	ILMN_214967	NUP133	NM_172288.1	NM_172288.1		234865	26986606	NM_172288.1	Nup133	NP_758492.1	ILMN_2654013	006200068	S	3136	GACCGAGAGACAGCTGAGTCTTAGTGCAATGCCTGTGTTGACCGCACCAC	8	-	126431666-126431715	8qE2	Mus musculus nucleoporin 133 (Nup133), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence ISS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [evidence ISS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of RNA, ribonucleic acids, into, out of, within or between cells [goid 50658] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube [goid 48339] [evidence IMP]	Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence ISS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4832420O05Rik	4832420O05Rik
Mus musculus	RefSeq	ILMN_219782	ILMN_219782	SVS3B	NM_173377.2	NM_173377.2		329557	124378040	NM_173377.2	Svs3b	NP_775553.1	ILMN_1258886	001300066	S	1120	CCCTTACACTTTTCCATCTTCTCTCATGCCCTGCCACTGTCAAGTTCATA	2	-	164080181-164080230	2qH3	Mus musculus seminal vesicle secretory protein 3B (Svs3b), mRNA.				9530004A22Rik; RP23-346D16.10	9530004A22Rik; RP23-346D16.10
Mus musculus	Riken	ILMN_206376	ILMN_206376	6430598J10RIK	ri|6430598J10|PX00048C09|AK078325|1388					AK078325	6430598J10Rik		ILMN_1225813	002850114	S	1132	GCTCAGATAGAAACACAATCAATGGCTGGAAGTCATTCTTTGGCTCTTGC										
Mus musculus	RefSeq	ILMN_200674	ILMN_245309	LOC639582	XR_003261.1	XR_003261.1		639582	94378909	XR_003261.1	LOC639582		ILMN_1245595	006560647	S	837	GCCCAGCAAGAACAGAGAGGAAGGGAGAGGACCTTGGCTGCTGAAGGGTC					PREDICTED: Mus musculus similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (LOC639582), mRNA.					
Mus musculus	RefSeq	ILMN_214842	ILMN_214842	PPFIA4	XM_129443.7	XM_129443.7		68507	94363970	XM_129443.7	Ppfia4	XP_129443.7	ILMN_2652553	004780181	S	5005	CTGAATAGTGGAGTTATAGAGAAGGGCCAGTCCTAAGATGGAAGGAGCCC	1	-	136193766-136193815	1qE4	PREDICTED: Mus musculus protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4, transcript variant 1 (Ppfia4), mRNA.					
Mus musculus	MEEBO	ILMN_185129	ILMN_185129	ZZZ3	scl22447.5.1_50	NM_198416.1			38259201	NM_198416.1	Zzz3		ILMN_2432039	001240474	S	5	AGAGAGTGCCAGTCAGCACACTGCCGAGGAGGAAGATGATGACCCTGATG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_202687	ILMN_202687	4933411K20RIK	ri|A930026P06|PX00066F02|AK020894|1168					AK020894	4933411K20Rik		ILMN_2551519	002490128	S	144	CACCCGGGGAGGCAGAGTAAGAACCTGGGCTGAGCCTTAAATCTCCAGAC										
Mus musculus	RefSeq	ILMN_237864	ILMN_237864	B230340J04RIK	NM_177234.2	NM_177234.2		320703	31343133	NM_177234.2	B230340J04Rik	NP_796208.1	ILMN_3160936	003870044	S	2569	GGGAACTAGGAGAGAATTGGTTCCTGCTTTTCGTCTCCTGGTGGTGTCAG	X	+	71538141-71538190	XqA7.3	Mus musculus RIKEN cDNA B230340J04 gene (B230340J04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199828	ILMN_230269	4931427P12RIK	XM_982453.1	XM_982453.1		622474	94371418	XM_982453.1	4931427P12Rik	XP_987547.1	ILMN_1238249	005270253	S	445	GGACTCGGCGCCAAAGTGAAGCCAGGGCAAAACCTCAACTTATTCTGTGG				5qG2	PREDICTED: Mus musculus RIKEN cDNA 4931427P12 gene (4931427P12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_248093	ILMN_248093	V1RH21	NM_134244.1	NM_134244.1		171278	58866044	NM_134244.1	V1rh21	NP_599005.1	ILMN_2856063	006520433	S	344	GGCAGAGGCTCAACCTAAAGACCCCACAGCACACTCTTTTCTCGCTGCTC	13	+	22420123-22420172	13qA3.1	Mus musculus vomeronasal 1 receptor, H21 (V1rh21), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	Riken	ILMN_205184	ILMN_205184	C230091O11RIK	ri|C230091O11|PX00177N08|AK049019|2795					AK049019	C230091O11Rik		ILMN_1241677	002070326	S	2686	CTATTAGGTACTGTGGTTTCTAACTGCTGCTCTGGGAGTCGGGGGGGGGG										
Mus musculus	RefSeq	ILMN_208870	ILMN_208870	G6PC3	NM_175935.3	NM_175935.3		68401	47271523	NM_175935.3	G6pc3	NP_787949.2	ILMN_2766114	000630373	S	795	GTACCCATGGAGCGGGAGCTTAGCTTTTATGGGTTGACTGCTCTGGCCCT	11	+	102054431-102054480	11qD	Mus musculus glucose 6 phosphatase, catalytic, 3 (G6pc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IDA]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence ISA]	AV128920; AU045429; AU019276; UGRP; 0710001K01Rik; AW545836	AV128920; AU045429; AU019276; UGRP; 0710001K01Rik; AW545836
Mus musculus	RefSeq	ILMN_208870	ILMN_208870	G6PC3	NM_175935.3	NM_175935.3		68401	47271523	NM_175935.3	G6pc3	NP_787949.2	ILMN_1218602	005390725	S	667	GCCTGGCTTATTGTACCTTCCTATTGGCAGTCGGCCTATCTCGGGTCTTC	11	+	102054086-102054135	11qD	Mus musculus glucose 6 phosphatase, catalytic, 3 (G6pc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IDA]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence ISA]	AV128920; AU045429; AU019276; UGRP; 0710001K01Rik; AW545836	AV128920; AU045429; AU019276; UGRP; 0710001K01Rik; AW545836
Mus musculus	RefSeq	ILMN_209925	ILMN_313819	AB041803	XR_035177.1	XR_035177.1		232685	149255033	XR_035177.1	AB041803		ILMN_1214368	003370189	S	1443	GGTTAAAGCAGTTACGGACCCTGGAAGATGGGAGATACTTACAAAAAGCA	6	-	31115706-31115755	6qA3.3	PREDICTED: Mus musculus cDNA sequence AB041803 (AB041803), misc RNA.					
Mus musculus	RefSeq	ILMN_202067	ILMN_326364	LOC100046098	XM_001475578.1	XM_001475578.1		100046098	149267769	XM_001475578.1	LOC100046098	XP_001475628.1	ILMN_1227105	005670209	S	2011	GGGGCAGGCAGGAGAAGGAAGTGAGGTTTTGAGCTAAGTCACAGGGAGCC					PREDICTED: Mus musculus hypothetical protein LOC100046098 (LOC100046098), mRNA.					
Mus musculus	RefSeq	ILMN_219839	ILMN_235778	C330024D12RIK	XM_978288.1	XM_978288.1		78444	94380657	XM_978288.1	C330024D12Rik	XP_983382.1	ILMN_2714212	004120468	S	556	GCGAGTCATCATCCAAGAAATGCTGGAAGAAATCGGGAAAGTCCAGACTC				7qD1	PREDICTED: Mus musculus RIKEN cDNA C330024D12 gene (C330024D12Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217137	ILMN_217137	GM75	NM_203508.1	NM_203508.1		219026	45356140	NM_203508.1	Gm75	NP_987104.1	ILMN_2679491	002100047	S	1173	CAGGATTTTTGCTGATATCATCATCTTTATGCCTATTCAAACTAAATGAT	14	+	51737382-51737431	14qC1	Mus musculus gene model 75, (NCBI) (Gm75), mRNA.					
Mus musculus	Riken	ILMN_207184	ILMN_207184	SLC6A4	ri|7330411H24|PX00650D17|AK078634|2150					AK078634	Slc6a4		ILMN_2585676	000460475	S	2041	TGGCCACCTGCAGAGGTCAGAGCAGAGTACTGGATTCCCTGAAGCTGGAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of, within or between cells [goid 15844] [evidence ISO]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: serotonin(out) + Na+(out) = serotonin(in) + Na+(in) [goid 5335] [evidence IEA]; Catalysis of the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of the membrane to the other [goid 8504] [evidence ISO]		
Mus musculus	RefSeq	ILMN_251332	ILMN_251332	BC006779	NM_183162.2	NM_183162.2		229003	125347766	NM_183162.2	BC006779	NP_898985.2	ILMN_2932787	000450706	S	9899	CACCCCCAACCCCGCCGAGGTCAGAGTTGCTGCAAGTGAAATATACACCA	2	-	180962480-180962529	2qH4	Mus musculus cDNA sequence BC006779 (BC006779), mRNA. XM_001001098 XM_001003843 XM_001003848 XM_001003853 XM_001003857 XM_994341 XM_994355 XM_994381 XM_994398			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	mKIAA1769; MGC63178	mKIAA1769; MGC63178
Mus musculus	Riken	ILMN_204585	ILMN_204585	C130039D01RIK	ri|C130039D01|PX00168P14|AK048183|2218					AK048183	C130039D01Rik		ILMN_1233446	007100564	S	1458	GTCAGCACTTTCCAGGTCATTTGAGAGGTCGCAGTGGTAGACCCCTCTCG										
Mus musculus	MEEBO	ILMN_195668	ILMN_195668	7530408C15RIK	scl43900.2.1601_27						7530408C15Rik		ILMN_2517611	006450520	S	19	ATTATTTGCCCCCCACTTTGGTGGTAATAAAGGACCCTTGTTGGACTTCT										
Mus musculus	RefSeq	ILMN_214647	ILMN_214647	FOXP4	NM_028767.1	NM_028767.1		74123	21630274	NM_028767.1	Foxp4	NP_083043.1	ILMN_2650317	000010358	S	2574	GCTGGAAACGATGAGATTCCACAGACCCCCTATGGGGGACCCACAACCCA	17	-	48004315-48004364	17qC	Mus musculus forkhead box P4 (Foxp4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process by which the anatomical structures of the foregut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48617] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	2310007G05Rik; mFKHLA; 1200010K03Rik	2310007G05Rik; mFKHLA; 1200010K03Rik
Mus musculus	Riken	ILMN_203737	ILMN_203737	9830138G03RIK	ri|9830138G03|PX00118K12|AK036588|2299					AK036588	9830138G03Rik		ILMN_1250543	007400670	S	1896	AGTGCCATGGGAGGGAAAGAGATGTGGAGAAAGAGGGGTGGAAGGCCTCC										
Mus musculus	RefSeq	ILMN_258441	ILMN_258441	WIZ	NM_011717.2	NM_011717.2		22404	46909562	NM_011717.2	Wiz	NP_035847.2	ILMN_3095005	006550356	A	3835	TGGAAGAGCTCAAAGCTGACAGCTGCCTCCTGCCTTGTCAGAGCCTCAGG	17	-	32491292-32491341	17qB1	Mus musculus widely-interspaced zinc finger motifs (Wiz), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_258441	ILMN_258441	WIZ	NM_011717.2	NM_011717.2		22404	46909562	NM_011717.2	Wiz	NP_035847.2	ILMN_3022719	002630692	I	80	AGGCCTGGGCAGGGACCCCTCCAGCCAAGACTGTCAACCCACCCTGTGTA	17	-	32525701-32525750	17qB1	Mus musculus widely-interspaced zinc finger motifs (Wiz), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217638	ILMN_217638	AW555464	scl42726.20_132	XM_127132.3			38073767	XM_127132.3	AW555464		ILMN_2685769	007210274	S	6637	CTCCATACTTAGTTCCTCTGTCACTTTAGCCTTCAACCCGGCATTGGTAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]				
Mus musculus	RefSeq	ILMN_237627	ILMN_237627	CLGN	NM_009904.2	NM_009904.2		12745	86262137	NM_009904.2	Clgn	NP_034034.2	ILMN_2917723	006980487	S	2091	GAGAGATCGGGCATCTAGAGTCAGGGTGTCCAGAAGGACAGTGACTGCGC	8	+	85950541-85950590	8qC2	Mus musculus calmegin (Clgn), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Cln; 4930459O04Rik; AI528775	Cln; 4930459O04Rik; AI528775
Mus musculus	RefSeq	ILMN_220475	ILMN_256642	OLFR955	NM_207141.1	NM_207141.1		258242	46369484	NM_207141.1	Olfr955	NP_997024.1	ILMN_2722556	002940722	S	860	CCATGATCTACAGCCTGAGAAATAAAGATGTCAAAGTTGCCCTAAAAAAG	9	-	39277400-39277449	9qA5.1	Mus musculus olfactory receptor 955 (Olfr955), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-50; MOR171-34	MOR171-50; MOR171-34
Mus musculus	MEEBO	ILMN_222122	ILMN_222122	GMPPB	scl36480.8.1_52	NM_177910.2			31342693	NM_177910.2	Gmppb		ILMN_2744909	006130440	S	1261	GTCAGTACCAGAACCTCGTATTATCATGTGAAGGATATGGAGGGCTGGCC							The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: GTP + alpha-D-mannose 1-phosphate = diphosphate + GDP-mannose [goid 4475] [evidence ISO]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214042	ILMN_214042	DDX4	NM_010029.1	NM_010029.1		13206	33859535	NM_010029.1	Ddx4	NP_034159.1	ILMN_2827588	002510019	S	2292	GCCAGCTTCATTGATTAGTTATGTGAAATGCTGACGTTACAACACTGCAG	13	-	113388961-113389010	13qD2.2	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 (Ddx4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of a cell, the basic structural and functional unit of all organisms [goid 44464] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV206478; Mvh; VASA	AV206478; Mvh; VASA
Mus musculus	RefSeq	ILMN_214042	ILMN_214042	DDX4	NM_010029.1	NM_010029.1		13206	33859535	NM_010029.1	Ddx4	NP_034159.1	ILMN_2643601	006420202	S	2443	AAGTGCTTAAGTCTTAGTATAGTGTTTATGATCCTATAAAACAAGCAATA	13	-	113388810-113388859	13qD2.2	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 (Ddx4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of a cell, the basic structural and functional unit of all organisms [goid 44464] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV206478; Mvh; VASA	AV206478; Mvh; VASA
Mus musculus	RefSeq	ILMN_214042	ILMN_214042	DDX4	NM_010029.1	NM_010029.1		13206	33859535	NM_010029.1	Ddx4	NP_034159.1	ILMN_1250802	001440181	S	383	AGAAGCATCAGGCCCGTTCAGAAGAGGGGGAAGAGGCAGTTTCCGAGGCT	13	-	113416559-113416608	13qD2.2	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 (Ddx4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of a cell, the basic structural and functional unit of all organisms [goid 44464] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV206478; Mvh; VASA	AV206478; Mvh; VASA
Mus musculus	RefSeq	ILMN_221039	ILMN_221039	2310005N01RIK	NM_027310.3	NM_027310.3		70088	146149130	NM_027310.3	2310005N01Rik	NP_081586.1	ILMN_2730249	000450424	S	419	ATCAGGAAAACGAGCCTGCGCAGGAGGACCCCGAGGACCTAGACGGCTCC				4qD2.2	Mus musculus RIKEN cDNA 2310005N01 gene (2310005N01Rik), mRNA.				2810036M01Rik	2810036M01Rik
Mus musculus	RefSeq	ILMN_206882	ILMN_331462	LOC629554	XR_035395.1	XR_035395.1		629554	149259931	XR_035395.1	LOC629554		ILMN_1215523	002000386	S	698	GCTACCGCTTGATGTCAGGTCACAGGAGCTCCTCGTGTATTCTGGACTCC	9	-	51721678-51721727	9qA5.3	PREDICTED: Mus musculus hypothetical protein LOC629554 (LOC629554), misc RNA.					
Mus musculus	RefSeq	ILMN_234074	ILMN_234074	SRI	NM_001080974.1	NM_001080974.1		109552	124430536	NM_001080974.1	Sri	NP_001074443.1	ILMN_3044633	004480300	I	38	AGTCTGCACCATGGCGTATCCCGGGCACCCTGGCGCGGGCGGAGGGTACT	5	+	8056579-8056588:8056589-8056628	5qA1	Mus musculus sorcin (Sri), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Sor; 2210417O06Rik; 2900070H08Rik	Sor; 2210417O06Rik; 2900070H08Rik
Mus musculus	RefSeq	ILMN_234074	ILMN_234074	SRI	NM_001080974.1	NM_001080974.1		109552	124430536	NM_001080974.1	Sri	NP_001074443.1	ILMN_3120014	002370632	A	545	GAGGGCTCTCACAGATAGCTTTCGCAGACGGGATTCGGGTCAACAAGGAG	5	+	8063737-8063750:8064558-8064593	5qA1	Mus musculus sorcin (Sri), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Sor; 2210417O06Rik; 2900070H08Rik	Sor; 2210417O06Rik; 2900070H08Rik
Mus musculus	RefSeq	ILMN_199708	ILMN_199708	LOC382895	XM_356739.1	XM_356739.1			38076431	XM_356739.1	LOC382895		ILMN_2536192	000050202	S	114	CCAGTCCGTGGACCAGCCTGATGCTCATGTCACGCTCTCTGAAGGAGCCT										
Mus musculus	Riken	ILMN_203155	ILMN_203155	SREBF2	ri|6720462H11|PX00059N03|AK032847|2665					AK032847	Srebf2		ILMN_1234082	001030113	S	2491	GCAGGCAGAAGGTGCAAAAGTTCAAGGTCATCCTCAGCTACATAGGGGCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_200904	ILMN_245133	MTAP7D2	NM_001081124.1	NM_001081124.1		78283	124487456	NM_001081124.1	Mtap7d2	NP_001074593.1	ILMN_1216376	004250324	S	464	GCGATGGAGAAAACTTGAGGAGCAGCGCCAACGGGAGGATCAGAAGAGGG	X	+	155883937-155883986	XqF4	Mus musculus MAP7 domain containing 2 (Mtap7d2), mRNA.				C030036K04Rik; 1600028E09Rik; 5330432J06Rik; RP23-39I7.2; 2900002G04Rik	C030036K04Rik; 1600028E09Rik; 5330432J06Rik; RP23-39I7.2; 2900002G04Rik
Mus musculus	RefSeq	ILMN_245133	ILMN_245133	MTAP7D2	NM_001081124.1	NM_001081124.1		78283	124487456	NM_001081124.1	Mtap7d2	NP_001074593.1	ILMN_2867651	007400445	S	270	GAAGCGGCCTCCGGGAGAGCCTCCCAGTCCACCCCGCGGTCCGCAGGAAT	X	+	155852779-155852824:155881855-155881858	XqF4	Mus musculus MAP7 domain containing 2 (Mtap7d2), mRNA.				C030036K04Rik; 1600028E09Rik; 5330432J06Rik; RP23-39I7.2; 2900002G04Rik	C030036K04Rik; 1600028E09Rik; 5330432J06Rik; RP23-39I7.2; 2900002G04Rik
Mus musculus	RefSeq	ILMN_211677	ILMN_249553	TARDBP	NM_001003898.1	NM_001003898.1		230908	56682934	NM_001003898.1	Tardbp	NP_001003898.1	ILMN_1228976	003830491	S	941	CTGAAGAGCTTCAGCAGTTTTTCTGTCAGTATGGAGAAGTGGTAGATGTC	4|NT_039289.1	-	147993346-147993395	4qE2	Mus musculus TAR DNA binding protein (Tardbp), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	1190002A23Rik; C85084	1190002A23Rik; C85084
Mus musculus	RefSeq	ILMN_210117	ILMN_210117	DPY30	NM_024428.3	NM_024428.3		66310	142348817	NM_024428.3	Dpy30	NP_077746.2	ILMN_2602396	004230521	S	633	GACCACAGACCTCACTTTTGGAGTTGCAGAAGAGAGCATATCCCTGTTTG	17	-	74698930-74698979	17qE2	Mus musculus dpy-30 homolog (C. elegans) (Dpy30), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			DPY30; C87842	DPY30; C87842
Mus musculus	RefSeq	ILMN_191831	ILMN_191831	TNFRSF11A	NM_009399.3	NM_009399.3		21934	110350008	NM_009399.3	Tnfrsf11a	NP_033425.3	ILMN_2482600	005700373	S	2306	GTGAAAGGGATGCACGGCCACTACCACTAAGGCTTTGAGTTTGTGTGGAT	1	+	107741949-107741998	1qE2.1	Mus musculus tumor necrosis factor receptor superfamily, member 11a (Tnfrsf11a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	TRANCE-R; Ly109; mRANK; OFE; ODFR; Rank	TRANCE-R; Ly109; mRANK; OFE; ODFR; Rank
Mus musculus	RefSeq	ILMN_188947	ILMN_245439	CD44	NM_001039150.1	NM_001039150.1		12505	85540465	NM_001039150.1	Cd44	NP_001034239.1	ILMN_2640330	004250441	S	1244	GACTCCAGTCATAGTACAACCCTTCAGCCTACTGCAGCTCCAAATACCCA	2	-	102674437-102674486	2qE2	Mus musculus CD44 antigen (Cd44), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The series of events that restore integrity to damaged tissue during or following an inflammatory response [goid 2246] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IMP]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1
Mus musculus	RefSeq	ILMN_205860	ILMN_245439	CD44	NM_001039150.1	NM_001039150.1		12505	85540465	NM_001039150.1	Cd44	NP_001034239.1	ILMN_1223697	002230538	S	3353	GGGAACCCCTCAAAAAGCCACAGGACTGCCCACCACTGGGATCTTATCAT	2	-	102652949-102652998	2qE2	Mus musculus CD44 antigen (Cd44), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The series of events that restore integrity to damaged tissue during or following an inflammatory response [goid 2246] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IMP]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1
Mus musculus	RefSeq	ILMN_188947	ILMN_245439	CD44	NM_001039150.1	NM_001039150.1		12505	85540465	NM_001039150.1	Cd44	NP_001034239.1	ILMN_1246460	001660070	S	1365	CTACATTACATGGAGAGCCGGAAGAAGACGAAAACCATCCAACAACTTCT	2	-	102672655-102672704	2qE2	Mus musculus CD44 antigen (Cd44), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The series of events that restore integrity to damaged tissue during or following an inflammatory response [goid 2246] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IMP]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1
Mus musculus	RefSeq	ILMN_188947	ILMN_245439	CD44	NM_001039150.1	NM_001039150.1		12505	85540465	NM_001039150.1	Cd44	NP_001034239.1	ILMN_2730266	006590228	S	1018	AGCTACCCAGCAGGAGACGTGGTTTCAGAACGGATGGCAGGGGAAGAACC	2	-	102679559-102679608	2qE2	Mus musculus CD44 antigen (Cd44), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The series of events that restore integrity to damaged tissue during or following an inflammatory response [goid 2246] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IMP]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1
Mus musculus	RefSeq	ILMN_188947	ILMN_245439	CD44	NM_001039150.1	NM_001039150.1		12505	85540465	NM_001039150.1	Cd44	NP_001034239.1	ILMN_2474229	000110079	S	4585	GTGTCTTTGTGTAAGTCCTATGTGTTGACTTTTCAAATATAGCCAATTGC	2	-	102651717-102651766	2qE2	Mus musculus CD44 antigen (Cd44), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The series of events that restore integrity to damaged tissue during or following an inflammatory response [goid 2246] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IMP]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1
Mus musculus	RefSeq	ILMN_188947	ILMN_245439	CD44	NM_001039150.1	NM_001039150.1		12505	85540465	NM_001039150.1	Cd44	NP_001034239.1	ILMN_2754990	005080228	S	1171	TTCCTGGACAGATTTCTTCGACCCAATCTCACATCCAATGGGACAAGGTC	2	-	102677987-102678036	2qE2	Mus musculus CD44 antigen (Cd44), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The series of events that restore integrity to damaged tissue during or following an inflammatory response [goid 2246] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IMP]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1
Mus musculus	RefSeq	ILMN_188947	ILMN_245439	CD44	NM_001039150.1	NM_001039150.1		12505	85540465	NM_001039150.1	Cd44	NP_001034239.1	ILMN_2697830	004150014	S	1497	AAGGCTACACCTTTCAATACCCAGACACAATGGAAAATGGGACTCTCTTC	2	-	102671577-102671626	2qE2	Mus musculus CD44 antigen (Cd44), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The series of events that restore integrity to damaged tissue during or following an inflammatory response [goid 2246] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IMP]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1
Mus musculus	RefSeq	ILMN_245439	ILMN_245439	CD44	NM_001039150.1	NM_001039150.1		12505	85540465	NM_001039150.1	Cd44	NP_001034239.1	ILMN_3114585	004880138	A	4813	CTAGGGTCTCTGGTGTGAAGGGTCTGGGAAGTGGAGAGGGGCAGAAAGTG	2	-	102651489-102651538	2qE2	Mus musculus CD44 antigen (Cd44), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The series of events that restore integrity to damaged tissue during or following an inflammatory response [goid 2246] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IMP]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1	AU023126; Ly-24; AW146109; HERMES; AW121933; Pgp-1
Mus musculus	RefSeq	ILMN_198170	ILMN_198170	LOC381099	XM_355014.1	XM_355014.1			38082489	XM_355014.1	LOC381099		ILMN_1243568	006200546	S	414	GGGCCCAAAGCAAAATGTTAGTGTGGTTGGACATCATACTCAGGCCACTG										
Mus musculus	RefSeq	ILMN_218696	ILMN_218696	NRN1	NM_153529.1	NM_153529.1		68404	23956285	NM_153529.1	Nrn1	NP_705757.1	ILMN_2699052	005050471	S	1141	CTTCCACAGTACCTTGTTTTGATCATTTCCACTGCACATTTCTCCTCCAG	13	-	36817901-36817950	13qA3.3	Mus musculus neuritin 1 (Nrn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence ISO]		0710008J23Rik; Nrn; MGC40786; cpg15	0710008J23Rik; Nrn; MGC40786; cpg15
Mus musculus	RefSeq	ILMN_210912	ILMN_235657	MYO9A	XM_981204.1	XM_981204.1		270163	94386154	XM_981204.1	Myo9a	XP_986298.1	ILMN_1218921	003830474	S	11883	GCACTGTATAGCTACACAAAAGCAGCCTGCTGAACAAATCACTCCATGGC	9	+	59776593-59776642	9qB	PREDICTED: Mus musculus myosin IXa, transcript variant 2 (Myo9a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210912	ILMN_235657	MYO9A	XM_981204.1	XM_981204.1		270163	94386154	XM_981204.1	Myo9a	XP_986298.1	ILMN_1257931	004060079	S	2147	GAATTTCCTGCTGTGATGGAGCCTGCTTTTATCATAAAACATTATGCTGG	9	+	59672068-59672117	9qB	PREDICTED: Mus musculus myosin IXa, transcript variant 2 (Myo9a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208672	ILMN_235657	MYO9A	XM_981204.1	XM_981204.1		270163	94386154	XM_981204.1	Myo9a	XP_986298.1	ILMN_1240806	005720619	S	9251	CTCCCTACAGATAAGAGGCCATTAGACAGGTGGTGAGAGCCATTCACCCC	9	+	59773961-59774010	9qB	PREDICTED: Mus musculus myosin IXa, transcript variant 2 (Myo9a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	Riken	ILMN_205020	ILMN_205020	A330045L03RIK	ri|A330045L03|PX00131K14|AK039461|1843					AK039461	A330045L03Rik		ILMN_1245863	007550564	S	1449	CCCTAATGTTATCTACTGGGCATTACTGTGGCCAGCCATGGGAGGTGCTG										
Mus musculus	RefSeq	ILMN_213844	ILMN_213844	LGALS2	NM_025622.2	NM_025622.2		107753	142372017	NM_025622.2	Lgals2	NP_079898.1	ILMN_2641371	006450193	S	225	ACACCAGTGAAGGTGGCCGCTGGGGACAAGAGCAACGAGAAAATCACATG	15	-	78681720-78681769	15qE1	Mus musculus lectin, galactose-binding, soluble 2 (Lgals2), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	AI324147; 2200008F12Rik	AI324147; 2200008F12Rik
Mus musculus	RefSeq	ILMN_199417	ILMN_199417	OLFR1411	NM_146490.1	NM_146490.1		258483	33239103	NM_146490.1	Olfr1411	NP_666701.1	ILMN_1222501	002470050	S	759	GGCTGTGTCCTTGTTTTATGGAACTGTGTTTGTCATGTATGCCCAGCCTG	1	+	94493856-94493905	1qD	Mus musculus olfactory receptor 1411 (Olfr1411), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC157607; MOR208-3	MGC157607; MOR208-3
Mus musculus	RefSeq	ILMN_196813	ILMN_196813	LOC207182	XM_141564.1	XM_141564.1			20862038	XM_141564.1	LOC207182		ILMN_1252252	004900228	S	467	TGCAGAGATCCTGGGATACCAAGGTGGGGACCCTGCCTGGGCTCTTGGTG										
Mus musculus	RefSeq	ILMN_194528	ILMN_314881	5033425G24RIK	XM_001479771.1	XM_001479771.1		75998	149263203	XM_001479771.1	5033425G24Rik	XP_001479821.1	ILMN_2507249	007210427	S	1627	CTACTTCGTGTCTCTTATAAACCACTCCATTGTCTTGACTCTTAGATCAA				12qC3	PREDICTED: Mus musculus RIKEN cDNA 5033425G24 gene (5033425G24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201417	ILMN_328512	EG382156	NM_001014395.1	NM_001014395.1		382156	148539587	NM_001014395.1	EG382156	NP_001014417.1	ILMN_1221918	006480112	S	182	GGTTCTACTGTGACATGGTCACCCTACCGCTCCATGGCAAAGAGACATGG				9qF2	Mus musculus predicted gene, EG382156 (EG382156), mRNA.					
Mus musculus	RefSeq	ILMN_228699	ILMN_228699	OTTMUSG00000015743	NM_001034900.2	NM_001034900.2		545471	142367199	NM_001034900.2	OTTMUSG00000015743	NP_001030072.1	ILMN_3160534	005670274	S	2540	ATTGAAGCTGGTCCACTATTTGTAAGTCTCCGGCTCCTCTAGGGCCTATG	2	-	150296843-150296892	2qG3	Mus musculus predicted gene, OTTMUSG00000015743 (OTTMUSG00000015743), mRNA.					
Mus musculus	RefSeq	ILMN_211580	ILMN_237644	CTRC	NM_001033875.2	NM_001033875.2		76701	134053930	NM_001033875.2	Ctrc	NP_001029047.1	ILMN_1216509	002320333	S	645	CGTGCTCCAGGTTGGACTGGTGGTTCATCAAGGTCCGGGAGACGATGGTG	4	-	141396200-141396249	4qE1	Mus musculus chymotrypsin C (caldecrin) (Ctrc), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]	MGC107504; 1810044E12Rik	MGC107504; 1810044E12Rik
Mus musculus	RefSeq	ILMN_184393	ILMN_257449	STRN	NM_011500.2	NM_011500.2		268980	61098077	NM_011500.2	Strn	NP_035630.2	ILMN_1233677	004590424	S	2507	GCCCTTTTGTTCTGCTGAGGGAGCACAGAGAACTCTGTTAAAAGTATAGT	17	-	79054689-79054738	17qE3	Mus musculus striatin, calmodulin binding protein (Strn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	D130055P19; AU022939	D130055P19; AU022939
Mus musculus	RefSeq	ILMN_227879	ILMN_227879	PALB2	NM_001081238.1	NM_001081238.1		233826	124486978	NM_001081238.1	Palb2	NP_001074707.1	ILMN_3005756	004010553	S	421	GCAACCATCTGGATGAGGAGACTGGAGAAAACATCTCTCAGATACTTGAT	7	-	129271868-129271917	7qF3	Mus musculus partner and localizer of BRCA2 (Palb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			4732427B05; BC066140	4732427B05; BC066140
Mus musculus	RefSeq	ILMN_200331	ILMN_200331	LOC386247	XM_359138.1	XM_359138.1			38081332	XM_359138.1	LOC386247		ILMN_2538387	006270392	S	1155	AGATGCTTTTGCCAGGAAGAAATGCAAGCAGATACAGCTCTTATGGCCAC										
Mus musculus	RefSeq	ILMN_222951	ILMN_222951	GALNT5	NM_172855.2	NM_172855.2		241391	142367249	NM_172855.2	Galnt5	NP_766443.1	ILMN_1240046	006100653	S	3650	CGGCAAAGTATAATGATAACTGAAGAATGTCACCAATGATCTCCTGATGC	2	+	57898109-57898158	2qC1.1	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (Galnt5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	4832424J23	4832424J23
Mus musculus	RefSeq	ILMN_217255	ILMN_217255	OLFR814	NM_207159.1	NM_207159.1		259165	46391070	NM_207159.1	Olfr814	NP_997042.1	ILMN_2680992	001240037	S	642	TTCTTATGCTCACATTGTCAAGACAATTATAAAATTCCCTTCTGCTCAGC	10	-	129311120-129311169	10qD3	Mus musculus olfactory receptor 814 (Olfr814), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR113-5; MOR113-8	MOR113-5; MOR113-8
Mus musculus	Riken	ILMN_205653	ILMN_205653	ICOSL	ri|A530099O11|PX00143L12|AK041320|1789					AK041320	Icosl		ILMN_1235456	005420273	S	1695	GGCAGAGGCAAGTGGATTCCTGTGAGTTTGAGGCCAGACTGGTCAGTAGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-4 [goid 45404] [evidence IMP]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence TAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198909	ILMN_316510	LOC668038	XR_034201.1	XR_034201.1		668038	149259344	XR_034201.1	LOC668038		ILMN_1234256	004610309	S	227	TGAGTGCGGGCGCAGAGGCCATCAAGCCCAAAATGCCAAAAGGCCCCAAA				8qD3	PREDICTED: Mus musculus similar to ribosomal protein (LOC668038), misc RNA.					
Mus musculus	Riken	ILMN_206610	ILMN_206610	HPA	ri|E030042C09|PX00206O09|AK087283|1962					AK087283	Hpa		ILMN_1219209	001190577	S	1540	CGGGGCCGGATGGATTACTTTCCAAGTGAGTAAAGTCTCCTGTTGGCTGC										
Mus musculus	RefSeq	ILMN_191377	ILMN_238082	HOXC8	NM_010466.1	NM_010466.1		15426	21362260	NM_010466.1	Hoxc8	NP_034596.1	ILMN_2671465	002070209	S	1157	CTCTTTATTTGTCTGGGGGTTGGGAGGGGGAACCTGAGACACAGGGAAAA	15	+	102823473-102823522	15qF3	Mus musculus homeo box C8 (Hoxc8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	D130011F21Rik; Hox-3.1	D130011F21Rik; Hox-3.1
Mus musculus	RefSeq	ILMN_212577	ILMN_212577	MTMR4	NM_133215.1	NM_133215.1		170749	18875367	NM_133215.1	Mtmr4	NP_573478.1	ILMN_2627995	006400291	S	5420	TCACTCTGTTTTCAGGGGGATTGGGGACATTCGGGGAGACTGTATCTGTC	11	+	87429526-87429575	11qC	Mus musculus myotubularin related protein 4 (Mtmr4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	mKIAA0647; AA596759; FYVE-DSP2; ZFYVE11; ESTM44	mKIAA0647; AA596759; FYVE-DSP2; ZFYVE11; ESTM44
Mus musculus	RefSeq	ILMN_225326	ILMN_225326	OLFR1152	NM_001011834.1	NM_001011834.1		258103	58801431	NM_001011834.1	Olfr1152	NP_001011834.1	ILMN_2780472	002570370	S	811	GACAAAATGACCTCACTGTTTTACACCTTGGTGATCCCTGTGTTGAACCC	2	+	87708960-87709009	2qD	Mus musculus olfactory receptor 1152 (Olfr1152), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR177-12	MOR177-12
Mus musculus	RefSeq	ILMN_187476	ILMN_187476	ZFP111	NM_019940.1	NM_019940.1		56707	9910605	NM_019940.1	Zfp111	NP_064324.1	ILMN_2836693	002710605	S	3119	CTGAGGGCAAACTCCCTCAGTGTCTTATGTGCAGACACTCCTGTAAGCAG	7	-	24982107-24982156	7qA3	Mus musculus zinc finger protein 111 (Zfp111), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187476	ILMN_187476	ZFP111	NM_019940.1	NM_019940.1		56707	9910605	NM_019940.1	Zfp111	NP_064324.1	ILMN_2836698	004070180	S	2971	TTTTACATGGCTAGTCCATCCTATACCCCTGCAATGGAGATTCTGCTTCT	7	-	24982255-24982304	7qA3	Mus musculus zinc finger protein 111 (Zfp111), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185428	ILMN_185428	TPM3	NM_022314.2	NM_022314.2		59069	40254524	NM_022314.2	Tpm3	NP_071709.2	ILMN_2426965	001580601	S	2	CATGCAGAAGAAGCTGAAAGGGACAGAGGATGAGCTGGACAAGTATTCGG	3	+	89876617-89876658:89876659-89876666	3qF1	Mus musculus tropomyosin 3, gamma (Tpm3), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [evidence IDA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm [goid 2102] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Trop-5; Tpm5; MGC102590; gamma-TM; Tpm-5; Tm5NM; hTM30nm; hTMnm	Trop-5; Tpm5; MGC102590; gamma-TM; Tpm-5; Tm5NM; hTM30nm; hTMnm
Mus musculus	RefSeq	ILMN_185428	ILMN_185428	TPM3	NM_022314.2	NM_022314.2		59069	40254524	NM_022314.2	Tpm3	NP_071709.2	ILMN_2426967	006620204	S	6	CAGAAGAAGCTGAAAGGGACAGAGGATGAGCTGGACAAGTATTCGGAAGC	3	+	89876621-89876658:89876659-89876670	3qF1	Mus musculus tropomyosin 3, gamma (Tpm3), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [evidence IDA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm [goid 2102] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Trop-5; Tpm5; MGC102590; gamma-TM; Tpm-5; Tm5NM; hTM30nm; hTMnm	Trop-5; Tpm5; MGC102590; gamma-TM; Tpm-5; Tm5NM; hTM30nm; hTMnm
Mus musculus	RefSeq	ILMN_185428	ILMN_185428	TPM3	NM_022314.2	NM_022314.2		59069	40254524	NM_022314.2	Tpm3	NP_071709.2	ILMN_2426966	002810477	S	181	GCAGAAGAAGCTGAAAGGGACAGAGGATGAGCTGGACAAGTATTCGGAAG	3	+	89877665-89877714	3qF1	Mus musculus tropomyosin 3, gamma (Tpm3), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [evidence IDA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm [goid 2102] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Trop-5; Tpm5; MGC102590; gamma-TM; Tpm-5; Tm5NM; hTM30nm; hTMnm	Trop-5; Tpm5; MGC102590; gamma-TM; Tpm-5; Tm5NM; hTM30nm; hTMnm
Mus musculus	RefSeq	ILMN_185428	ILMN_185428	TPM3	NM_022314.2	NM_022314.2		59069	40254524	NM_022314.2	Tpm3	NP_071709.2	ILMN_2444316	002690142	S	629	CAGATCAGACTGATGGACCAGAACCTGAAGTGTCTGAGTGCTGCTGAAGA	3	+	89892345-89892394	3qF1	Mus musculus tropomyosin 3, gamma (Tpm3), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [evidence IDA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm [goid 2102] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Trop-5; Tpm5; MGC102590; gamma-TM; Tpm-5; Tm5NM; hTM30nm; hTMnm	Trop-5; Tpm5; MGC102590; gamma-TM; Tpm-5; Tm5NM; hTM30nm; hTMnm
Mus musculus	RefSeq	ILMN_209170	ILMN_209170	RDH1	NM_080436.1	NM_080436.1		107605	20147788	NM_080436.1	Rdh1	NP_536684.1	ILMN_2826216	003870750	S	3186	GTAGTGTCTGGGTTTGATGACTGTATATGGGATGGATACCCAGGTGGGGC	10	+	127170591-127170640	10qD3	Mus musculus retinol dehydrogenase 1 (all trans) (Rdh1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IDA]; The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 1523] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction in which one substrate is a sterol derivative [goid 16229] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212494	ILMN_212494	DKKL1	NM_015789.2	NM_015789.2		50722	31980690	NM_015789.2	Dkkl1	NP_056604.2	ILMN_2752580	006400014	S	344	ACTTCCATCAGGAAGAGAACCAGGAGCACAGAATGGGCAACCATACCCTC	7	-	52465713-52465762	7qB4	Mus musculus dickkopf-like 1 (Dkkl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			SGY; SGY-1; Soggy; AI414495; SGY1; mSgy	SGY; SGY-1; Soggy; AI414495; SGY1; mSgy
Mus musculus	RefSeq	ILMN_212494	ILMN_212494	DKKL1	NM_015789.2	NM_015789.2		50722	31980690	NM_015789.2	Dkkl1	NP_056604.2	ILMN_2627081	001940221	S	565	TTGCACCCAGAGCCCCGGCAGGTGGCTTTCTGGATCATGAAGATGCCAAG	7	-	52463150-52463199	7qB4	Mus musculus dickkopf-like 1 (Dkkl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			SGY; SGY-1; Soggy; AI414495; SGY1; mSgy	SGY; SGY-1; Soggy; AI414495; SGY1; mSgy
Mus musculus	RefSeq	ILMN_212494	ILMN_212494	DKKL1	NM_015789.2	NM_015789.2		50722	31980690	NM_015789.2	Dkkl1	NP_056604.2	ILMN_2823612	007200600	S	568	CACCCAGAGCCCCGGCAGGTGGCTTTCTGGATCATGAAGATGCCAAGGCG	7	-	52463147-52463196	7qB4	Mus musculus dickkopf-like 1 (Dkkl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			SGY; SGY-1; Soggy; AI414495; SGY1; mSgy	SGY; SGY-1; Soggy; AI414495; SGY1; mSgy
Mus musculus	RefSeq	ILMN_199067	ILMN_199067	LOC380661	XM_358400.1	XM_358400.1			38090716	XM_358400.1	LOC380661		ILMN_2533933	004830296	S	164	AGGACCTTGGAAGGCCTGGTGCTGTTTCTCTCAATGGCAGCTGACTTGGC										
Mus musculus	RefSeq	ILMN_249080	ILMN_249080	OLFR512	NM_146724.1	NM_146724.1		258719	22129392	NM_146724.1	Olfr512	NP_666935.1	ILMN_2902804	005270113	S	834	CTCACCGGATACCAAGAAACTGATGTCATTGGCGTATATACTGCTCACCC	7	+	115857702-115857751	7qE3	Mus musculus olfactory receptor 512 (Olfr512), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR268-3	MOR268-3
Mus musculus	RefSeq	ILMN_223222	ILMN_249080	OLFR512	NM_146724.1	NM_146724.1		258719	22129392	NM_146724.1	Olfr512	NP_666935.1	ILMN_1230268	007380092	S	304	GCAACCATTTCCTTTGGAGGTTGTTTTGCACAAATGTATTTCATTCTTTT	7	+	115857172-115857221	7qE3	Mus musculus olfactory receptor 512 (Olfr512), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR268-3	MOR268-3
Mus musculus	RefSeq	ILMN_212148	ILMN_212148	DHX30	NM_133347.1	NM_133347.1		72831	19111155	NM_133347.1	Dhx30	NP_579925.1	ILMN_1233008	001260692	S	3829	GAGCCTCTCTTCCGCTGGGGCTATGTACAGAGTGCAAATGTTTATTTAAA	9	-	109986848-109986896:109986897-109986897	9qF2	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 30 (Dhx30), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2810477H02Rik; C130058C04Rik; Ddx30; HELG; AA682062; AU015424	2810477H02Rik; C130058C04Rik; Ddx30; HELG; AA682062; AU015424
Mus musculus	RefSeq	ILMN_197480	ILMN_197480	LOC229022	XM_143047.2	XM_143047.2			38076177	XM_143047.2	LOC229022		ILMN_1233287	005560564	S	2729	GTAGCACTGTGACTGGAGATTTGAGCCATGTGAGACCCCAGTGGAGCACT										
Mus musculus	RefSeq	ILMN_221050	ILMN_221050	MIF4GD	NM_027162.3	NM_027162.3		69674	34328401	NM_027162.3	Mif4gd	NP_081438.3	ILMN_1252144	001340301	S	1248	CTTCAGCCCCTTCTAGACTTTTTTGACTGCTGTGGTTCTGCCGTCTTCCC	11	-	115469590-115469639	11qE2	Mus musculus MIF4G domain containing (Mif4gd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310075G12Rik; 1110014L05Rik	2310075G12Rik; 1110014L05Rik
Mus musculus	RefSeq	ILMN_221050	ILMN_221050	MIF4GD	NM_027162.3	NM_027162.3		69674	34328401	NM_027162.3	Mif4gd	NP_081438.3	ILMN_2730410	000360091	S	749	GTGGGCTCCTCAACCGGCTGCAGAAGGAGTATGATGCGCGGGAGCAGCTC	11	-	115470662-115470711	11qE2	Mus musculus MIF4G domain containing (Mif4gd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310075G12Rik; 1110014L05Rik	2310075G12Rik; 1110014L05Rik
Mus musculus	RefSeq	ILMN_221050	ILMN_221050	MIF4GD	NM_027162.3	NM_027162.3		69674	34328401	NM_027162.3	Mif4gd	NP_081438.3	ILMN_2991660	006860291	S	1479	TGGGCAATTTTAGCCATTGGTGGAATGCTTTGGGATGTTAAGGGCAAGTT	11	-	115469359-115469408	11qE2	Mus musculus MIF4G domain containing (Mif4gd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310075G12Rik; 1110014L05Rik	2310075G12Rik; 1110014L05Rik
Mus musculus	RefSeq	ILMN_219991	ILMN_219991	ARAP1	NM_198096.1	NM_198096.1		69710	37655162	NM_198096.1	Arap1	NP_932764.1	ILMN_1258175	001450427	S	12	AGAGGGAGCCTGAGATCCTCCAGGGGCTCCTTGTGCCCTGACCAGCAGCT	7	+	108542913-108542962	7qE3	Mus musculus ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 (Arap1), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2410002L19Rik; mKIAA0782	2410002L19Rik; mKIAA0782
Mus musculus	RefSeq	ILMN_200207	ILMN_200207	LOC385943	XM_359008.1	XM_359008.1			38080906	XM_359008.1	LOC385943		ILMN_1257215	001260292	S	584	GCAGACAGACCCAGAAGTGTCTCTCACAGGTGATTCCAAATGCAGAATTC										
Mus musculus	RefSeq	ILMN_217847	ILMN_260837	ERCC6	NM_001081221.1	NM_001081221.1		319955	124487018	NM_001081221.1	Ercc6	NP_001074690.1	ILMN_2688327	004200259	S	7037	GGTAACATTCCTCATAAGGGTTCAGTTTTATATTAGCTTCGTTCTAGATG	14	+	33392790-33392839	14qB	Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 6 (Ercc6), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [evidence IMP]; The repair of UV-induced T-T, C-T and C-C dimers [goid 6290] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IMP]; The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity in response to phosphorylation by a member of the JUN kinase kinase kinase (JNKKK) family, or another upstream kinase. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress [goid 7256] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	CSB; C130058G22Rik; 4732403I04	CSB; C130058G22Rik; 4732403I04
Mus musculus	RefSeq	ILMN_238024	ILMN_238024	GM1008	NM_001005425.1	NM_001005425.1		381405	53749213	NM_001005425.1	Gm1008	NP_001005425.1	ILMN_3093777	000630397	A	494	CAAGGAGAAAGCCCTTGGGAACCCTCAGGCCACAGCCTCTCAGAAGTCCA	2	-	165179564-165179571:165183933-165183974	2qH3	Mus musculus gene model 1008, (NCBI) (Gm1008), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC86131; RP23-395E18.6	MGC86131; RP23-395E18.6
Mus musculus	RefSeq	ILMN_238024	ILMN_238024	GM1008	NM_001005425.1	NM_001005425.1		381405	53749213	NM_001005425.1	Gm1008	NP_001005425.1	ILMN_3021415	001660561	I	2949	GGGCTCAATGTTAAAAGCCCCTGCTCCACATGCCTCGTGACCTCTGTTTG	2	-	165177109-165177158	2qH3	Mus musculus gene model 1008, (NCBI) (Gm1008), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC86131; RP23-395E18.6	MGC86131; RP23-395E18.6
Mus musculus	RefSeq	ILMN_208948	ILMN_208948	SLC22A9	NM_144785.1	NM_144785.1		207151	21450130	NM_144785.1	Slc22a9	NP_659034.1	ILMN_2591076	007050010	S	679	ACTGCTCACTTCGATTCCTGTCAGGGATTTTTTCCTCAACCCTGAGGACA	19	-	7767309-7767316:7768176-7768217	19qA	Mus musculus solute carrier family 22 (organic anion transporter), member 9 (Slc22a9), mRNA.		The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IDA]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IDA]; Enables the directed movement of a toxin into, out of, within or between cells. A toxin is a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 19534] [evidence IDA]	OAT-5; D630043A20Rik; Slc22a19; Oat5; MGC29260	OAT-5; D630043A20Rik; Slc22a19; Oat5; MGC29260
Mus musculus	RefSeq	ILMN_208948	ILMN_208948	SLC22A9	NM_144785.1	NM_144785.1		207151	21450130	NM_144785.1	Slc22a9	NP_659034.1	ILMN_2800740	003190671	S	1644	CAGCCTCTGCCTGACTCAATCCAAGATATAGAAAATAAGAGGAAAAGCTC	19	-	7747798-7747833:7748733-7748746	19qA	Mus musculus solute carrier family 22 (organic anion transporter), member 9 (Slc22a9), mRNA.		The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IDA]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IDA]; Enables the directed movement of a toxin into, out of, within or between cells. A toxin is a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 19534] [evidence IDA]	OAT-5; D630043A20Rik; Slc22a19; Oat5; MGC29260	OAT-5; D630043A20Rik; Slc22a19; Oat5; MGC29260
Mus musculus	RefSeq	ILMN_208948	ILMN_208948	SLC22A9	NM_144785.1	NM_144785.1		207151	21450130	NM_144785.1	Slc22a9	NP_659034.1	ILMN_2800732	004220286	S	1484	TGCTTTAGGAGTCGTTGGAATTGCTGGCAGTGCTGGAGGAGCGCTGTCTC	19	-	7748857-7748906	19qA	Mus musculus solute carrier family 22 (organic anion transporter), member 9 (Slc22a9), mRNA.		The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IDA]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IDA]; Enables the directed movement of a toxin into, out of, within or between cells. A toxin is a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 19534] [evidence IDA]	OAT-5; D630043A20Rik; Slc22a19; Oat5; MGC29260	OAT-5; D630043A20Rik; Slc22a19; Oat5; MGC29260
Mus musculus	RefSeq	ILMN_208948	ILMN_208948	SLC22A9	NM_144785.1	NM_144785.1		207151	21450130	NM_144785.1	Slc22a9	NP_659034.1	ILMN_2652112	004230196	S	1886	AGTTTGTCATGTATAAAATAACTATAATAAAGAAATTTGAATAAAATCAC				19qA	Mus musculus solute carrier family 22 (organic anion transporter), member 9 (Slc22a9), mRNA.		The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IDA]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IDA]; Enables the directed movement of a toxin into, out of, within or between cells. A toxin is a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 19534] [evidence IDA]	OAT-5; D630043A20Rik; Slc22a19; Oat5; MGC29260	OAT-5; D630043A20Rik; Slc22a19; Oat5; MGC29260
Mus musculus	RefSeq	ILMN_220212	ILMN_317178	LOC630305	XR_035639.1	XR_035639.1		630305	149274939	XR_035639.1	LOC630305		ILMN_1247021	004640364	S	353	GGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTACCTGC					PREDICTED: Mus musculus similar to Ig H chain V region (clone 1E10) (LOC630305), misc RNA.					
Mus musculus	RefSeq	ILMN_195137	ILMN_317178	LOC630305	XR_035639.1	XR_035639.1		630305	149274939	XR_035639.1	LOC630305		ILMN_1237923	003190154	S	314	TAGTAATGGTGGTAGCACCTACTATCCAGACACTGTGAAGGGCCGATTCA					PREDICTED: Mus musculus similar to Ig H chain V region (clone 1E10) (LOC630305), misc RNA.					
Mus musculus	RefSeq	ILMN_211981	ILMN_258683	ATG2A	NM_194348.3	NM_194348.3		329015	112382277	NM_194348.3	Atg2a	NP_919329.2	ILMN_1213779	002030152	S	6011	TGTGAAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTG	19	+	6261975-6262024	19qA	Mus musculus ATG2 autophagy related 2 homolog A (S. cerevisiae) (Atg2a), mRNA.				mKIAA0404; MGC67447; A830054M12; 1810013C15Rik; BC023754	mKIAA0404; MGC67447; A830054M12; 1810013C15Rik; BC023754
Mus musculus	RefSeq	ILMN_258683	ILMN_258683	ATG2A	NM_194348.3	NM_194348.3		329015	112382277	NM_194348.3	Atg2a	NP_919329.2	ILMN_2963432	003390424	S	6220	CGTGTCTCACGGGGAGGTGGGGGATAGATGCCATGTGGGTCGGTGTATTT	19	+	6262184-6262233	19qA	Mus musculus ATG2 autophagy related 2 homolog A (S. cerevisiae) (Atg2a), mRNA.				mKIAA0404; MGC67447; A830054M12; 1810013C15Rik; BC023754	mKIAA0404; MGC67447; A830054M12; 1810013C15Rik; BC023754
Mus musculus	RefSeq	ILMN_195275	ILMN_258683	ATG2A	NM_194348.3	NM_194348.3		329015	112382277	NM_194348.3	Atg2a	NP_919329.2	ILMN_1237432	001410747	S	6015	AAGGATACCTGCCCAGCCTGCTTGTTGCCAACTGGCCGAGAGAGTGGGGC	19	+	6261979-6262028	19qA	Mus musculus ATG2 autophagy related 2 homolog A (S. cerevisiae) (Atg2a), mRNA.				mKIAA0404; MGC67447; A830054M12; 1810013C15Rik; BC023754	mKIAA0404; MGC67447; A830054M12; 1810013C15Rik; BC023754
Mus musculus	Riken	ILMN_204574	ILMN_204574	MEF2C	ri|C130028H04|PX00168D15|AK047994|1392					AK047994	Mef2c		ILMN_1220270	003400162	S	1258	AGCACAGCTAATGACAAGTGCAGCTGATGGTACATCGCACTCACGCCCAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	Riken	ILMN_204216	ILMN_204216	A730030D03RIK	ri|A730030D03|PX00150I24|AK042845|2239					AK042845	A730030D03Rik		ILMN_2563268	001470095	S	1892	GTATAATGTCTTCATGACGGCAAGACTAACCCTAGAGGTAGGGAGTGTGC										
Mus musculus	RefSeq	ILMN_222482	ILMN_246810	TRIP11	XM_001001171.2	XM_001001171.2		109181	149263492	XM_001001171.2	Trip11	XP_001001171.1	ILMN_1260269	001300577	S	2375	ATGAAGAGGTAAGAAATCAGTTGGAAGAATCTGTTGCTGGCAACAAGCAG	12	-	103123907-103123956	12qE	PREDICTED: Mus musculus thyroid hormone receptor interactor 11, transcript variant 3 (Trip11), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_202160	ILMN_246810	TRIP11	XM_001001171.2	XM_001001171.2		109181	149263492	XM_001001171.2	Trip11	XP_001001171.1	ILMN_2547469	004610465	S	886	GGACATTGGAGACATATTGCTCAGACTAAGGTACAGGGAGCACAAAGCTC	12	-	103133900-103133926:103137035-103137057	12qE	PREDICTED: Mus musculus thyroid hormone receptor interactor 11, transcript variant 3 (Trip11), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192733	ILMN_192733	2310005L22RIK	scl24876.1.45_10						2310005L22Rik		ILMN_2490820	006350192	S	10	GGATTTTTCCGTCTGGTCCAAGGAAGCACGGGTTATGGCCACATGCGCAG										
Mus musculus	RefSeq	ILMN_212080	ILMN_212080	ZBTB7C	NM_145356.3	NM_145356.3		207259	47271528	NM_145356.3	Zbtb7c	NP_663331.1	ILMN_2622500	002260398	S	4466	GGACAATCTTCCGTAACTTTGGTCGCACGCTGCATCCTGCCCAGAAATGC	18	+	76308112-76308161	18qE3	Mus musculus zinc finger and BTB domain containing 7C (Zbtb7c), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Zbtb36; B230208J24Rik	Zbtb36; B230208J24Rik
Mus musculus	RefSeq	ILMN_186134	ILMN_233026	8430419L09RIK	NM_028982.3	NM_028982.3		74525	141803243	NM_028982.3	8430419L09Rik	NP_083258.2	ILMN_1221940	003400504	S	2817	GTATGCAACCACTCTGGCCCCGTGTCCTTCCCTCCTTGTAGAGCTTTGAA	6	+	135184931-135184980	6qG1	Mus musculus RIKEN cDNA 8430419L09 gene (8430419L09Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			KIAA1467; mKIAA1467	KIAA1467; mKIAA1467
Mus musculus	RefSeq	ILMN_198082	ILMN_198082	LOC381063	XM_358498.1	XM_358498.1			38081722	XM_358498.1	LOC381063		ILMN_2530428	004260563	S	832	GGGCATCCTGATCCCGCTGAGCCCCTTCCAGGTGCAGAAGGGTTAACAAT										
Mus musculus	RefSeq	ILMN_227104	ILMN_227104	MORF4L1	NM_001039147.1	NM_001039147.1		21761	85540472	NM_001039147.1	Morf4l1	NP_001034236.1	ILMN_3038459	001770601	I	345	GTGCTGTGAGGCCCAGGCGCTCTGAAAAATCTTTGAAGACACGTGAGGAT	9	-	89998557-89998606	9qE3.1	Mus musculus mortality factor 4 like 1 (Morf4l1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	KIAA4002; mKIAA4002; TEG-189; MORFRG15; MGC102415; MGC103105; MGC118047; MRG15; Tex189	KIAA4002; mKIAA4002; TEG-189; MORFRG15; MGC102415; MGC103105; MGC118047; MRG15; Tex189
Mus musculus	MEEBO	ILMN_211501	ILMN_211501	D6ERTD160E	scl30196.1.1_310	NM_177467.2			31343371	NM_177467.2	D6Ertd160e		ILMN_2616471	004490753	S	1768	ATATTTATATATTACACCATGCTGCAGTAGTCTGTATAATTATCCGTCAA										
Mus musculus	RefSeq	ILMN_198184	ILMN_239377	EG240110	XM_911987.3	XM_911987.3		240110	149269363	XM_911987.3	EG240110	XP_917080.1	ILMN_1260086	002190603	S	175	GCCAACAATGCAAAGGCAGCGAGTGCGCGTGTAGAGGCCATCAAGCCCAA				17qC	PREDICTED: Mus musculus predicted gene, EG240110 (EG240110), mRNA.					
Mus musculus	MEEBO	ILMN_189888	ILMN_189888	TRGV5_AF037352_T_CELL_RECEPTOR_GAMMA_VARIABLE_5_279	TRGV5_AF037352_T_cell_receptor_gamma_variable_5_279						TRGV5_AF037352_T_cell_receptor_gamma_variable_5_279		ILMN_2465291	006370491	S	20	GGAATGTGGAGGAGTCCGATTCTGCTCTGTACTACTGTGCCTCCTGGGCT										
Mus musculus	RefSeq	ILMN_185948	ILMN_313453	LOC100045981	XM_001475298.1	XM_001475298.1		100045981	149251553	XM_001475298.1	LOC100045981	XP_001475348.1	ILMN_1233402	001340743	S	3078	CTCGCCATCAGCTGGGATCACACCACTAGTCCCTGTCCTTTAACCCATGG					PREDICTED: Mus musculus similar to synaptotagmin XI (LOC100045981), mRNA.					
Mus musculus	RefSeq	ILMN_214901	ILMN_214901	H2-KE6	NM_013543.1	NM_013543.1		14979	7305124	NM_013543.1	H2-Ke6	NP_038571.1	ILMN_2653265	003400184	S	1065	GTGGCTCAGGCATGCTGAATATGGAAGGCAGGGGTGCTTGTGACCCTAAT	17	-	34164004-34164053	17qB1	Mus musculus H2-K region expressed gene 6 (H2-Ke6), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics [goid 8209] [evidence IDA]; The chemical reactions and pathways involving estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 8210] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: testosterone + NAD+ = androst-4-ene-3,17-dione + NADH [goid 50327] [evidence IDA]	MGC107650; D17H6S112E; Ke6; H-2Ke6; Ring2	MGC107650; D17H6S112E; Ke6; H-2Ke6; Ring2
Mus musculus	MEEBO	ILMN_212200	ILMN_212200	2310021P13RIK	scl46589.23.1_15	XM_127591.4			38075694	XM_127591.4	2310021P13Rik		ILMN_1217926	005220523	S	5439	CAGAACCTCAAACGCAGCAAACAGACCAAGGAGTTGTGGCAGCGGGTCTC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208958	ILMN_208958	CPB2	NM_019775.2	NM_019775.2		56373	31982711	NM_019775.2	Cpb2	NP_062749.2	ILMN_1252517	007100239	S	501	CCTGACATGCTCCAGAAAATCTACATCGGATCATCATTCGAGAAGTACCC	14	+	75665223-75665272	14qD3	Mus musculus carboxypeptidase B2 (plasma) (Cpb2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IDA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	AI255929; 4930405E17Rik; 1110032P04Rik; Cpu; CPR; MGC107573; TAFI	AI255929; 4930405E17Rik; 1110032P04Rik; Cpu; CPR; MGC107573; TAFI
Mus musculus	RefSeq	ILMN_208958	ILMN_208958	CPB2	NM_019775.2	NM_019775.2		56373	31982711	NM_019775.2	Cpb2	NP_062749.2	ILMN_2905902	001030017	S	1132	CCAGGTACACACACGGCAGTGGCTCAGAAAGTTTATATCTAGCTCCTGGA	14	+	75678005-75678024:75683038-75683067	14qD3	Mus musculus carboxypeptidase B2 (plasma) (Cpb2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IDA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	AI255929; 4930405E17Rik; 1110032P04Rik; Cpu; CPR; MGC107573; TAFI	AI255929; 4930405E17Rik; 1110032P04Rik; Cpu; CPR; MGC107573; TAFI
Mus musculus	RefSeq	ILMN_208958	ILMN_208958	CPB2	NM_019775.2	NM_019775.2		56373	31982711	NM_019775.2	Cpb2	NP_062749.2	ILMN_2591188	000240520	S	390	CAGCAGACTTTCAATGACACGGTCAGCCCCCGCGCCTCCGCTTCATACTA	14	+	75660528-75660577	14qD3	Mus musculus carboxypeptidase B2 (plasma) (Cpb2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IDA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	AI255929; 4930405E17Rik; 1110032P04Rik; Cpu; CPR; MGC107573; TAFI	AI255929; 4930405E17Rik; 1110032P04Rik; Cpu; CPR; MGC107573; TAFI
Mus musculus	RefSeq	ILMN_208958	ILMN_208958	CPB2	NM_019775.2	NM_019775.2		56373	31982711	NM_019775.2	Cpb2	NP_062749.2	ILMN_2591187	006960731	S	388	ACAGCAGACTTTCAATGACACGGTCAGCCCCCGCGCCTCCGCTTCATACT	14	+	75660526-75660575	14qD3	Mus musculus carboxypeptidase B2 (plasma) (Cpb2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IDA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	AI255929; 4930405E17Rik; 1110032P04Rik; Cpu; CPR; MGC107573; TAFI	AI255929; 4930405E17Rik; 1110032P04Rik; Cpu; CPR; MGC107573; TAFI
Mus musculus	Riken	ILMN_206805	ILMN_206805	C230058O15RIK	ri|C230058O15|PX00175F19|AK082519|1432					AK082519	C230058O15Rik		ILMN_1230870	004200050	S	1346	GTGCTGTGCATATGCATGGGTTTTTCTGGCCAGTGTCTTTGAGATGATTG										
Mus musculus	RefSeq	ILMN_218105	ILMN_218105	PLEKHA1	NM_133942.2	NM_133942.2		101476	118129896	NM_133942.2	Plekha1	NP_598703.1	ILMN_2708877	002900010	S	3252	ACCCTGCTGTCTCTGTATGTCCAGTCGGTGGAACACTGTAATGACTTGAG	7	+	138056747-138056796	7qF3	Mus musculus pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 (Plekha1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	C920009D07Rik; TAPP1; AA960558	C920009D07Rik; TAPP1; AA960558
Mus musculus	RefSeq	ILMN_218105	ILMN_218105	PLEKHA1	NM_133942.2	NM_133942.2		101476	118129896	NM_133942.2	Plekha1	NP_598703.1	ILMN_1243564	004860553	S	476	CAGAGCCATCTTCCTTACTTTGCTCCTAAGCCACCTTCAGACAGTGCAGT	7	+	138044088-138044137	7qF3	Mus musculus pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 (Plekha1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	C920009D07Rik; TAPP1; AA960558	C920009D07Rik; TAPP1; AA960558
Mus musculus	MEEBO	ILMN_223794	ILMN_223794	EWSH	scl014030.1_55				6679714	NM_007968	Ewsh		ILMN_2769308	004150348	S	2064	AAACCAGAAAATGTTTTAAATTTATAATTCCATATTTATAATGTTGGCGA										
Mus musculus	RefSeq	ILMN_194096	ILMN_194096	ZCCHC9	NM_145453.2	NM_145453.2		69085	117647246	NM_145453.2	Zcchc9	NP_663428.2	ILMN_2503329	003120762	S	947	GTTAATTACCACCTCAAGGTTACTTTCCAAACTCAGCCTTTAGCGATTGA	13	-	91936673-91936722	13qC3	Mus musculus zinc finger, CCHC domain containing 9 (Zcchc9), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1810019C21Rik	1810019C21Rik
Mus musculus	RefSeq	ILMN_216885	ILMN_216885	B3GALNT1	NM_020026.2	NM_020026.2		26879	31560375	NM_020026.2	B3galnt1	NP_064410.1	ILMN_2805714	000380500	S	1256	GCCTGGGCTGAAACTCATGGAGCTCCCTAGACAGGAGTCAAGGCCTGAAC	3	-	69662710-69662759	3qE1	Mus musculus UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 (B3galnt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [evidence IDA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide = UDP + beta-N-acetyl-D-galactosaminyl-(1->3)-alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide [goid 47273] [evidence IEA]	b3GT3; B3galt3	b3GT3; B3galt3
Mus musculus	RefSeq	ILMN_216885	ILMN_216885	B3GALNT1	NM_020026.2	NM_020026.2		26879	31560375	NM_020026.2	B3galnt1	NP_064410.1	ILMN_2805719	006280053	S	1454	CCCTAAAAGAAAAACTAACTAGTCCACAGCCAGAATACAGTGTGGAGTTG	3	-	69662512-69662561	3qE1	Mus musculus UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1 (B3galnt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [evidence IDA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide = UDP + beta-N-acetyl-D-galactosaminyl-(1->3)-alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide [goid 47273] [evidence IEA]	b3GT3; B3galt3	b3GT3; B3galt3
Mus musculus	RefSeq	ILMN_196410	ILMN_314581	4930472D16RIK	XR_035267.1	XR_035267.1		74946	149233683	XR_035267.1	4930472D16Rik		ILMN_1235160	007150441	S	621	ATGTCTCCAGCAGATATTCAGGCAATGGCTTCCCAGGCAGGGCGAATGCC				1qA5	PREDICTED: Mus musculus RIKEN cDNA 4930472D16 gene (4930472D16Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_197557	ILMN_197557	LOC381450	XM_358582.1	XM_358582.1			38076563	XM_358582.1	LOC381450		ILMN_2528548	006560360	S	263	TGGGGAATGTGGTCTACTTCACAGTGTACATGACTCAAGTGAGCAACTCA										
Mus musculus	RefSeq	ILMN_212828	ILMN_212828	LRRC67	NM_145692.1	NM_145692.1		69312	22164765	NM_145692.1	Lrrc67	NP_663730.1	ILMN_1242218	006450551	S	846	GACAATTCCTAATGAATTGGAAAGCATCCAAAGATGCCAAGAAAATCAGC	1	-	9968942-9968991	1qA2	Mus musculus leucine rich repeat containing 67 (Lrrc67), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700011J18Rik	1700011J18Rik
Mus musculus	RefSeq	ILMN_212828	ILMN_212828	LRRC67	NM_145692.1	NM_145692.1		69312	22164765	NM_145692.1	Lrrc67	NP_663730.1	ILMN_2630818	007100113	S	1047	ATGCATCTTCAAAATGTTCCCAAGAAGATAAAACTACAATTACTGAAGAC	1	-	9966672-9966721	1qA2	Mus musculus leucine rich repeat containing 67 (Lrrc67), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700011J18Rik	1700011J18Rik
Mus musculus	RefSeq	ILMN_212828	ILMN_212828	LRRC67	NM_145692.1	NM_145692.1		69312	22164765	NM_145692.1	Lrrc67	NP_663730.1	ILMN_2726941	005360754	S	1119	ATCTGAAAGCTCGCTAACAAAAAACGATATCCATGAACCTCACCTTCTCC	1	-	9958945-9958994	1qA2	Mus musculus leucine rich repeat containing 67 (Lrrc67), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700011J18Rik	1700011J18Rik
Mus musculus	RefSeq	ILMN_215099	ILMN_215099	IFI203	NM_008328.2	NM_008328.2		15950	113865994	NM_008328.2	Ifi203	NP_032354.2	ILMN_1241443	004260554	S	3219	CTTTTCAATACCATGAACAATGGACTGATCCAGCCTAGACTAGTTTGAGT	1	-	175850879-175850928	1qH3	Mus musculus interferon activated gene 203 (Ifi203), transcript variant 2, mRNA. XM_925408 XM_925409 XM_925412 XM_925414 XM_925417 XM_925418 XM_925419	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189739	ILMN_241983	ZFP509	NM_029162.2	NM_029162.2		75079	83816976	NM_029162.2	Zfp509	NP_083438.1	ILMN_2463948	004480243	S	2390	TGAGGTCTCGTAACACTAGAGAGAACCGTCCCTCCTGCCCAACCCGGCTC	5	-	38591828-38591875:38591876-38591877	5qB3	Mus musculus zinc finger protein 509 (Zfp509), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4930518A03Rik	4930518A03Rik
Mus musculus	RefSeq	ILMN_258846	ILMN_258846	OLFR869	NM_146557.1	NM_146557.1		258550	49170039	NM_146557.1	Olfr869	NP_666768.1	ILMN_3162210	004610220	S	418	GTGGACTCTCAGGTGCACAATTTGATTGTGCTACAATTTACACACTTCAG	9	+	19942063-19942112	9qA3	Mus musculus olfactory receptor 869 (Olfr869), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR145-6	MOR145-6
Mus musculus	Riken	ILMN_202800	ILMN_202800	5031425M16RIK	ri|5031425M16|PX00037E20|AK030313|3275					AK030313	5031425M16Rik		ILMN_1229752	004730102	S	2928	CCAGGGCAGCACCAACCACAGAGAGCTGGGCCTTCAAACCAACCATCCAT										
Mus musculus	RefSeq	ILMN_214677	ILMN_224799	1110006O17RIK	NM_001033141.1	NM_001033141.1		68545	75677529	NM_001033141.1	1110006O17Rik	NP_001028313.1	ILMN_2650674	006250025	S	1022	CTCAGGAACGAGGAGTCAATAGAGCAAGACTTAAGGAAATAATGAGGTAG	18	-	35872782-35872831	18qB2	Mus musculus RIKEN cDNA 1110006O17 gene (1110006O17Rik), mRNA.					
Mus musculus	MEEBO	ILMN_224274	ILMN_224274	JARID1B	scl17448.26_107				23097247	NM_152895	Jarid1b		ILMN_2777722	004260066	S	6042	GTAATTTCATCAGTCTCTCTGGTTGTGGACAGCCGATACCAGTTTCCCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196718	ILMN_196718	KLRA22	NM_053152.2	NM_053152.2		93969	142374194	NM_053152.2	Klra22	NP_444382.1	ILMN_2664429	003180402	S	899	ATTTGTGGGAGGAGACTGGATAAATTCCCTCATTGACTCTCCAAGGAGTG					Mus musculus killer cell lectin-like receptor subfamily A, member 22 (Klra22), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ly49v	Ly49v
Mus musculus	RefSeq	ILMN_196718	ILMN_196718	KLRA22	NM_053152.2	NM_053152.2		93969	142374194	NM_053152.2	Klra22	NP_444382.1	ILMN_1233141	002630767	S	1127	TTCCTTGTGGAGAATGGACAGATCTTCTCTGGTACCCCAAAGCTTGGATA					Mus musculus killer cell lectin-like receptor subfamily A, member 22 (Klra22), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ly49v	Ly49v
Mus musculus	RefSeq	ILMN_212089	ILMN_212089	TIRAP	NM_054096.1	NM_054096.1		117149	16905130	NM_054096.1	Tirap	NP_473437.1	ILMN_1214645	004900102	S	2044	CCACCAAAACAAAGGAGAAAACACAAACCTGGCAGCTGCTCTGTATCCAG	9	-	34994532-34994581	9qA4	Mus musculus toll-interleukin 1 receptor (TIR) domain-containing adaptor protein (Tirap), mRNA.	Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IMP]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence ISO]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence ISO]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IPI]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISO]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	C130027E04Rik; Tlr4ap; AA407980; wyatt; Mal	C130027E04Rik; Tlr4ap; AA407980; wyatt; Mal
Mus musculus	RefSeq	ILMN_212089	ILMN_212089	TIRAP	NM_054096.1	NM_054096.1		117149	16905130	NM_054096.1	Tirap	NP_473437.1	ILMN_2792268	004780521	S	1857	GTCTTCTCTGACCAAGACCTCCTTGAGCACCAGGTACACACGTGAACACC	9	-	34994719-34994768	9qA4	Mus musculus toll-interleukin 1 receptor (TIR) domain-containing adaptor protein (Tirap), mRNA.	Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IMP]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence ISO]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence ISO]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IPI]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISO]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	C130027E04Rik; Tlr4ap; AA407980; wyatt; Mal	C130027E04Rik; Tlr4ap; AA407980; wyatt; Mal
Mus musculus	RefSeq	ILMN_212089	ILMN_212089	TIRAP	NM_054096.1	NM_054096.1		117149	16905130	NM_054096.1	Tirap	NP_473437.1	ILMN_2792267	000780619	S	2011	GCATACCTGAGGGCTTGGATTCTACCTCCAGCACCACCAAAACAAAGGAG	9	-	34994565-34994614	9qA4	Mus musculus toll-interleukin 1 receptor (TIR) domain-containing adaptor protein (Tirap), mRNA.	Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IMP]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence ISO]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence ISO]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IPI]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISO]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	C130027E04Rik; Tlr4ap; AA407980; wyatt; Mal	C130027E04Rik; Tlr4ap; AA407980; wyatt; Mal
Mus musculus	Riken	ILMN_202448	ILMN_202448	4921529O18RIK	ri|4930432K16|PX00031K11|AK015292|2413					AK015292	4921529O18Rik		ILMN_2549689	004830292	S	2090	GTTGTTCCGATAGTTCACCCAACTTGCACATGCGTTTCAGAGTCTGCTTC										
Mus musculus	RefSeq	ILMN_200238	ILMN_200238	LOC386041	XM_359041.1	XM_359041.1			38081041	XM_359041.1	LOC386041		ILMN_1259874	002340377	S	1837	CTCGAGCAGAAGCACACTTCATGGAGGAACCTGGGTGGGTCCTTTGTGAG										
Mus musculus	Riken	ILMN_201982	ILMN_201982	2300008H03RIK	ri|2300008H03|ZX00038E10|AK009045|1670					AK009045	2300008H03Rik		ILMN_2546104	000060037	S	1361	GACTTTCACGTGGGTGGAAGGTTCTCAACGCTTGGCCTTGGGGATAACTC										
Mus musculus	MEEBO	ILMN_218533	ILMN_218533	A930002I21RIK	scl22743.2.1_14	NM_175410.3			32129249	NM_175410.3	A930002I21Rik		ILMN_2696984	003830209	S	659	AAGGAGGCGGGGCTTCAGAGAATGCAGTACTTATTTCACAAATGAACTCC										
Mus musculus	RefSeq	ILMN_184918	ILMN_184918	ZP1	NM_009580.2	NM_009580.2		22786	124249091	NM_009580.2	Zp1	NP_033606.2	ILMN_2422676	001090543	S	1597	CCTCTGCCTGCCACCCTCTGGGGTCTGATACATGCTCTACTACGTGTGAC	19	-	10989331-10989380	19qA	Mus musculus zona pellucida glycoprotein 1 (Zp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]			
Mus musculus	RefSeq	ILMN_189673	ILMN_189673	V1RB5	NM_020521.1	NM_020521.1		107798	10048463	NM_020521.1	V1rb5	NP_065267.1	ILMN_2463370	004860243	S	867	TATTTTCACTGAAAAGCGTATGACTAAGATTTTGAGGTCAGTGTGTACCA	6	+	89859644-89859693		Mus musculus vomeronasal 1 receptor, B5 (V1rb5), mRNA.				mV1R5; mV1R3; V1r3	mV1R5; mV1R3; V1r3
Mus musculus	MEEBO	ILMN_211137	ILMN_211137	A130081B01	scl0331188.1_6				49615104	NM_199062	A130081B01		ILMN_2660579	004290669	S	407	ACGGAAGAGTCCATACTGACGAGAAATCCTGTAAACGTAATCAGTGCAGT										
Mus musculus	RefSeq	ILMN_219318	ILMN_219318	CD160	NM_018767.2	NM_018767.2		54215	31980880	NM_018767.2	Cd160	NP_061237.2	ILMN_2707181	001570564	S	945	CTGCCAGAGCGAGGTTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACG	3	-	96604176-96604225	3qF2.1	Mus musculus CD160 antigen (Cd160), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	By55; AU045688	By55; AU045688
Mus musculus	RefSeq	ILMN_206558	ILMN_259790	WBSCR17	XM_974931.1	XM_974931.1		212996	94376835	XM_974931.1	Wbscr17	XP_980025.1	ILMN_1231098	005810458	S	2782	CCCGCTCTGGACATTACCTGGAGGGTCTGGTGCTCCTTTGCACTTGATTT				5qG2	PREDICTED: Mus musculus Williams-Beuren syndrome chromosome region 17 homolog (human) (Wbscr17), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199381	ILMN_199381	MGEA6	NM_146034.1	NM_146034.1			22122510	NM_146034.1	Mgea6		ILMN_1259488	002060162	S	2452	ACACAGGAGGCCTGACAGCGTTACGTCTTACCGGCAGTCATTTCCGTCTC										
Mus musculus	MEEBO	ILMN_192849	ILMN_192849	KLHL5	scl27774.14_45				31340910	NM_175174	Klhl5		ILMN_2692482	003440079	S	149	GAGCCATGCTCATCAGATGAATTCTTTCAAGCCCTTAACCATGCAGAGCA										
Mus musculus	MEEBO	ILMN_192849	ILMN_192849	KLHL5	scl27774.14_45				31340910	NM_175174	Klhl5		ILMN_2692484	005260477	S	151	GCCATGCTCATCAGATGAATTCTTTCAAGCCCTTAACCATGCAGAGCAAA										
Mus musculus	RefSeq	ILMN_242271	ILMN_242271	NELF	NM_001039387.1	NM_001039387.1		56876	86476078	NM_001039387.1	Nelf	NP_001034476.1	ILMN_3129497	000620754	A	2713	ACTGTGAGGTCCCCATGACTCCCTTCAGTCTTGTCCAGGGTCTAGCAGGG	2	+	24918187-24918236	2qA3	Mus musculus nasal embryonic LHRH factor (Nelf), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215273	ILMN_242271	NELF	NM_001039387.1	NM_001039387.1		56876	86476078	NM_001039387.1	Nelf	NP_001034476.1	ILMN_2657467	003130022	S	2843	TCCCTGACCCAGGGGAGTTAGGATTGGGCACTGAACAATGTACGATATCC	2	+	24918317-24918366	2qA3	Mus musculus nasal embryonic LHRH factor (Nelf), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_198192	ILMN_198192	LOC269676	XM_196360.3	XM_196360.3			38082629	XM_196360.3	LOC269676		ILMN_1212923	004200220	S	628	CACCCGCTGGCAGGACAAAGCACCTTTCCCCAGGTTACCGTTCCTCCAAT										
Mus musculus	MEEBO	ILMN_187920	ILMN_187920	21716071_3233_RC	21716071_3233_rc						21716071_3233_rc		ILMN_2448279	006110047	S	13	CTGGCCCTCAAAGTAACGTGCAACGCTTTCTACGGTTTCACGGGGGTAGC										
Mus musculus	MEEBO	ILMN_184898	ILMN_184898	UBAP1	scl25534.8_259				15011881	NM_023305	Ubap1		ILMN_2458275	005670685	S	2	GGAAGCTGTCAGTTTTGAGTATCATTGGCCCTTTCCAGCACATGGGTGAG										
Mus musculus	MEEBO	ILMN_220441	ILMN_220441	4921513D09RIK	scl31060.16.1_26	XM_133659.2			28480363	XM_133659.2	4921513D09Rik		ILMN_1232913	000070609	S	2352	ACTATTTCCCGAGGAACATTTATTTGGAGTAGTTGAATATTTAGCGTGTG										
Mus musculus	RefSeq	ILMN_232063	ILMN_232063	ARID3C	NM_001017362.1	NM_001017362.1		550619	62865644	NM_001017362.1	Arid3c	NP_001017362.1	ILMN_2829099	006980072	S	1055	GGCCCCTCAATCTGGCAGGCAGTGGCATCAGCAGTATCAACGTGGCACTA	4	-	41913399-41913448	4qA5	Mus musculus AT rich interactive domain 3C (Bright like) (Arid3c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217177	ILMN_245908	4932425I24RIK	NM_001081025.1	NM_001081025.1		320214	124486623	NM_001081025.1	4932425I24Rik	NP_001074494.1	ILMN_2679908	001710647	S	2578	GCACTTTCACTAAAACTGGCTCACCTCATCTAGGTTAGGGTACCTATCGT	16	-	38297977-38298026	16qB3	Mus musculus RIKEN cDNA 4932425I24 gene (4932425I24Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]				
Mus musculus	RefSeq	ILMN_221211	ILMN_221211	RDH7	NM_017473.1	NM_017473.1		54150	8567341	NM_017473.1	Rdh7	NP_059501.1	ILMN_2871249	006180020	S	1211	GGGGCTGGCAATATCCTGTGAACTTAGCTTCTTGGGGCTTCATCTTGGCC	10	-	127287282-127287331	10qD3	Mus musculus retinol dehydrogenase 7 (Rdh7), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IEA]	CRAD2; AI194929	CRAD2; AI194929
Mus musculus	RefSeq	ILMN_188059	ILMN_254622	HIPK1	NM_010432.1	NM_010432.1		15257	6754195	NM_010432.1	Hipk1	NP_034562.1	ILMN_2652628	001740682	S	3809	TACTTGTAGTTGATGAGCACGAGGAGGGCTCCGTGGCTGCCTGCTAGTAG	3	-	103564443-103564492	3qF2.2	Mus musculus homeodomain interacting protein kinase 1 (Hipk1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence ISS]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IGI]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISS]	1110062K04Rik; Myak	1110062K04Rik; Myak
Mus musculus	RefSeq	ILMN_214735	ILMN_260598	GYPC	NM_001048207.1	NM_001048207.1		71683	115270964	NM_001048207.1	Gypc	NP_001041672.1	ILMN_1218358	002470634	S	1787	GCCTGAGACACTAATGAGGATGCAAGCTTGGTCAAGTATGGCCACCAGCC	18	-	32688319-32688368	18qB1	Mus musculus glycophorin C (Gypc), mRNA.				0610037F22Rik; Cd236r	0610037F22Rik; Cd236r
Mus musculus	RefSeq	ILMN_193974	ILMN_193974	TNNI3K	NM_177066.3	NM_177066.3		435766	59933231	NM_177066.3	Tnni3k	NP_796040.2	ILMN_3023962	004670136	I	2023	ACACCATCAAGGCTGATGTCTTCAGTTACGCCCTGTGTCTGTGGGAGCTC	3	-	154807422-154807471	3qH4	Mus musculus TNNI3 interacting kinase (Tnni3k), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D830019J24Rik; Cark	D830019J24Rik; Cark
Mus musculus	RefSeq	ILMN_193974	ILMN_193974	TNNI3K	NM_177066.3	NM_177066.3		435766	59933231	NM_177066.3	Tnni3k	NP_796040.2	ILMN_3096551	004290711	A	462	TTGCATAGCGGAGCAGATGTTCAGCAAGCGGGATATGGCGGCCTCACAGC	3	-	154965587-154965636	3qH4	Mus musculus TNNI3 interacting kinase (Tnni3k), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D830019J24Rik; Cark	D830019J24Rik; Cark
Mus musculus	RefSeq	ILMN_208909	ILMN_208909	PFKM	NM_021514.2	NM_021514.2		18642	31981184	NM_021514.2	Pfkm	NP_067489.2	ILMN_3004553	001240243	S	2509	AGGTTTCCCTGTACTCCATGCCTGCAACCAGGATCAGCTGTGGCCAGGAG	15	+	97960218-97960267	15qF1	Mus musculus phosphofructokinase, muscle (Pfkm), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a fructose substrate molecule [goid 8443] [evidence IDA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IMP]	AI131669; Pfka; PFK-M	AI131669; Pfka; PFK-M
Mus musculus	RefSeq	ILMN_216631	ILMN_254439	SOX12	NM_011438.2	NM_011438.2		20667	127139957	NM_011438.2	Sox12	NP_035568.1	ILMN_1227128	004220500	S	3009	AGAGATGTCACTGTCTGTGGTCTTTGGAGAACTAGTCTCGTAGCTGAGGG	2	-	152220724-152220773	2qG3	Mus musculus SRY-box containing gene 12 (Sox12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2010205A02Rik	2010205A02Rik
Mus musculus	RefSeq	ILMN_254439	ILMN_254439	SOX12	NM_011438.2	NM_011438.2		20667	127139957	NM_011438.2	Sox12	NP_035568.1	ILMN_3099470	006590672	A	1541	CCAGCAGCCAGCCCCCCTCGGATACACCTCGTTCCTCCTACATACCTTAA	2	-	152222192-152222241	2qG3	Mus musculus SRY-box containing gene 12 (Sox12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2010205A02Rik	2010205A02Rik
Mus musculus	RefSeq	ILMN_254439	ILMN_254439	SOX12	NM_011438.2	NM_011438.2		20667	127139957	NM_011438.2	Sox12	NP_035568.1	ILMN_3026635	002750750	I	4289	TGTGGGGCAAACTGTCAAGCATTTCTTCCACCAGACTCCCCTGTGGTCCC	2	-	152219444-152219493	2qG3	Mus musculus SRY-box containing gene 12 (Sox12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2010205A02Rik	2010205A02Rik
Mus musculus	RefSeq	ILMN_198275	ILMN_256446	GM949	NM_001033446.2	NM_001033446.2		381142	119360324	NM_001033446.2	Gm949	NP_001028618.1	ILMN_2531100	004230379	S	506	CTGCCTGGGATGCTTCTACCCGTGCCCCAAGTGCAACTCCAACAAGTGTG	18	+	47092135-47092184	18qC	Mus musculus gene model 949, (NCBI) (Gm949), mRNA.					
Mus musculus	RefSeq	ILMN_256446	ILMN_256446	GM949	NM_001033446.2	NM_001033446.2		381142	119360324	NM_001033446.2	Gm949	NP_001028618.1	ILMN_3081970	001500020	A	133	AACAAGAGGGTGCTCTGCAGCTTCGCCCACTCCAGAGCCATCTTTGATCC	18	+	47085690-47085739	18qC	Mus musculus gene model 949, (NCBI) (Gm949), mRNA.					
Mus musculus	RefSeq	ILMN_191480	ILMN_191480	V1RG12	NM_134234.1	NM_134234.1		171268	21717776	NM_134234.1	V1rg12	NP_598995.1	ILMN_2479442	001660241	S	741	CTCTATCTCTTCCATCATGGTTCTATATTCAGCCTTATTTGGTAATCCAG	7	+	12890894-12890943	7qA1	Mus musculus vomeronasal 1 receptor, G12 (V1rg12), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	MGC130060	MGC130060
Mus musculus	RefSeq	ILMN_219332	ILMN_219332	FGF13	NM_010200.2	NM_010200.2		14168	31542808	NM_010200.2	Fgf13	NP_034330.2	ILMN_2707356	001770369	S	226	AAGCCGGAGTGCCCAGAAGCCCCGGCCAAGCAAGCGCAGGCTAAGGAGAC	X	-	56387338-56387387	XqA6	Mus musculus fibroblast growth factor 13 (Fgf13), mRNA. XM_919159	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [evidence ISO]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Fhf2	Fhf2
Mus musculus	RefSeq	ILMN_219332	ILMN_219332	FGF13	NM_010200.2	NM_010200.2		14168	31542808	NM_010200.2	Fgf13	NP_034330.2	ILMN_1257196	002320184	S	1086	CCATGAGCCACAACGAATCAACGTAGCCAGTGAGGGCAAAACGAGGGCTC	X	-	56316685-56316709:56316710-56316734	XqA6	Mus musculus fibroblast growth factor 13 (Fgf13), mRNA. XM_919159	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [evidence ISO]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Fhf2	Fhf2
Mus musculus	RefSeq	ILMN_219332	ILMN_219332	FGF13	NM_010200.2	NM_010200.2		14168	31542808	NM_010200.2	Fgf13	NP_034330.2	ILMN_2745480	005340138	S	2121	CTCACCTGTACATGTACAAGTCCTCCTGTCATTGGATTTGGCACGTGAAC	X	-	56315650-56315699	XqA6	Mus musculus fibroblast growth factor 13 (Fgf13), mRNA. XM_919159	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [evidence ISO]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Fhf2	Fhf2
Mus musculus	RefSeq	ILMN_247516	ILMN_247516	3200002M19RIK	NM_027532.1	NM_027532.1		75430	21624620	NM_027532.1	3200002M19Rik	NP_081808.2	ILMN_2894960	000450047	S	404	AGATGAATGACTATAATGAGTCACCTGATGATGGAGAGGTCAATGAGGTG	7	+	101772813-101772858:101773015-101773018	7qE3	Mus musculus RIKEN cDNA 3200002M19 gene (3200002M19Rik), mRNA.				6330414C15Rik	6330414C15Rik
Mus musculus	RefSeq	ILMN_199550	ILMN_310802	LOC382722	XR_031052.1	XR_031052.1		382722	149263819	XR_031052.1	LOC382722		ILMN_1237452	005490082	S	787	CCGCAACCAGCAGACCACTGAGGCTTGGAAGGAGCTGCAGGAGCAGATGT	13	+	8128099-8128148	13qA1	PREDICTED: Mus musculus similar to hCG2022736 (LOC382722), misc RNA.					
Mus musculus	MEEBO	ILMN_219143	ILMN_219143	RHBDL7	scl0215160.4_168	NM_146002.1			22122462	NM_146002.1	Rhbdl7		ILMN_2709690	002340291	S	1576	TTTTAGGCTAGCCCCCCGGGCAGGTATATCATGGGGTCTTGAGGCTCCTG										
Mus musculus	RefSeq	ILMN_217175	ILMN_217175	SEMA4B	NM_013659.3	NM_013659.3		20352	142377065	NM_013659.3	Sema4b	NP_038687.2	ILMN_1226447	005890097	S	3649	TCCTACACAGACTCCTGGATCCTCGTTCCTTGTCCTAGCTCACCGTGCCC	7	+	87371113-87371162	7qD3	Mus musculus sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B (Sema4b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		mKIAA1745; KIAA1745; Semac; SemC	mKIAA1745; KIAA1745; Semac; SemC
Mus musculus	RefSeq	ILMN_214149	ILMN_234485	PDZD4	NM_001029868.1	NM_001029868.1		245469	71274175	NM_001029868.1	Pdzd4	NP_001025039.1	ILMN_1240613	000010128	S	960	AGTATTATGACCCAGCGGAGTTCATGGAGGGCGGCCCGCAGGAGGCAGAG	X	-	71068952-71069001	XqA7.3	Mus musculus PDZ domain containing 4 (Pdzd4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	B230341P03; Pdzk4; LU1; Xlu; Kiaa1444-hp; Pdzrnk4l; D130075J17Rik; PDZRN4L	B230341P03; Pdzk4; LU1; Xlu; Kiaa1444-hp; Pdzrnk4l; D130075J17Rik; PDZRN4L
Mus musculus	RefSeq	ILMN_214149	ILMN_234485	PDZD4	NM_001029868.1	NM_001029868.1		245469	71274175	NM_001029868.1	Pdzd4	NP_001025039.1	ILMN_2644822	000010424	S	842	ACTCAGACCGACATCACCTTCGAGCATATCATGGCGCTGGGCAAGCTGCG	X	-	71069070-71069119	XqA7.3	Mus musculus PDZ domain containing 4 (Pdzd4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	B230341P03; Pdzk4; LU1; Xlu; Kiaa1444-hp; Pdzrnk4l; D130075J17Rik; PDZRN4L	B230341P03; Pdzk4; LU1; Xlu; Kiaa1444-hp; Pdzrnk4l; D130075J17Rik; PDZRN4L
Mus musculus	RefSeq	ILMN_208837	ILMN_208837	SPRED2	NM_033523.2	NM_033523.2		114716	31543765	NM_033523.2	Spred2	NP_277058.1	ILMN_2969032	005390349	S	2635	TCCAGATGAAAAACACAGAAGTTGTGAATGAAGTTGTAGCCATTCCCTGC	11	+	19922363-19922412	11qA3.1	Mus musculus sprouty-related, EVH1 domain containing 2 (Spred2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]	Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence IPI]	C79158	C79158
Mus musculus	MEEBO	ILMN_211611	ILMN_211611	9530053H22	scl52182.3.1_84	NM_177827.2			31342916	NM_177827.2	9530053H22		ILMN_2617639	000940719	S	2461	TAATGAATAGAATCGGAACAAACATATCATAGAGAAGAGCAAAAGAATTT										
Mus musculus	MEEBO	ILMN_195721	ILMN_195721	D130004H04RIK	scl24174.2_631						D130004H04Rik		ILMN_2518074	004900600	S	3	CCCGGCTCTTGTACCTGTGTTGCCACGGGATTGTTTCTTAATAATTCCAC										
Mus musculus	MEEBO	ILMN_208619	ILMN_208619	OLFR668	scl0259061.1_51						Olfr668		ILMN_1244915	001070039	S	609	GGTTGCTTTATTGATTGGTGTGTTTGACATTTGTTGTATCTCTGTGTCTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187889	ILMN_187889	A730054J21RIK	scl17154.1.413_251						A730054J21Rik		ILMN_2447991	000650435	S	14	CCCTGGTGTGAAGATATTGTTCACTGGCTACAGTCTCTGACTTTGTGGCA										
Mus musculus	RefSeq	ILMN_215362	ILMN_215362	TCEB2	NM_026305.2	NM_026305.2		67673	142368491	NM_026305.2	Tceb2	NP_080581.1	ILMN_2687706	001740273	S	430	TGGCTGTCTACCTGATTGACTTTTCTGTTCCCTCTTGTTCACAGAACTCT	17	-	23961735-23961784	17qA3.3	Mus musculus transcription elongation factor B (SIII), polypeptide 2 (Tceb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	0610040H15Rik	0610040H15Rik
Mus musculus	RefSeq	ILMN_220427	ILMN_220427	SRPR	NM_026130.1	NM_026130.1		67398	27229035	NM_026130.1	Srpr	NP_080406.1	ILMN_2747480	003520192	S	2680	CTTCCTGGGAGAAAGGGATTGTTGAGAAGGATTCCTGTTGTCCCGTACCC	9	+	35024334-35024383	9qA4	Mus musculus signal recognition particle receptor ('docking protein') (Srpr), mRNA.	A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex [goid 5785] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with the signal recognition particle [goid 5047] [evidence IEA]	1300011P19Rik	1300011P19Rik
Mus musculus	RefSeq	ILMN_217970	ILMN_217970	NAP1L2	NM_008671.1	NM_008671.1		17954	6679009	NM_008671.1	Nap1l2	NP_032697.1	ILMN_2689955	005890170	S	2119	GCAGTAGAATTTAAAACTTGAATGCCTAAGAGGCCTGCATATGATTGAGA	X	-	100379811-100379860	XqD	Mus musculus nucleosome assembly protein 1-like 2 (Nap1l2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		Bpx	Bpx
Mus musculus	Riken	ILMN_202841	ILMN_202841	9030225E01RIK	ri|9030225E01|PX00060L02|AK033491|1967					AK033491	9030225E01Rik		ILMN_2552717	002510678	S	1543	TACAAGGCGGCTCCCTGTCTGCGGTGACTCCGTGCTGAGAGAGGAAGTGG										
Mus musculus	RefSeq	ILMN_216306	ILMN_216306	MYCBP2	NM_207215.2	NM_207215.2		105689	127141011	NM_207215.2	Mycbp2	NP_997098.2	ILMN_1240830	000020563	S	8544	CCATCTTTGATCAAGCTGCAAAACCTCCCTCTTCCCTAGTCCACAGCCCA	14	-	103569119-103569168	14qE2.3	Mus musculus MYC binding protein 2 (Mycbp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; The process by which a branchiomotor neuron growth cone is directed to a specific target site. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx [goid 21785] [evidence IMP]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process by which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron [goid 48667] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]; Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 51493] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pam; R75243; AW107953; C130061D10Rik; AW546647; AU023734	Pam; R75243; AW107953; C130061D10Rik; AW546647; AU023734
Mus musculus	RefSeq	ILMN_216306	ILMN_216306	MYCBP2	NM_207215.2	NM_207215.2		105689	127141011	NM_207215.2	Mycbp2	NP_997098.2	ILMN_1238676	001470561	S	14489	GGGTGCGGCGTGTGCAGAAATGCTCACACGTTTTAGAACTTTCAGATCCT	14	-	103513322-103513336:103513337-103513371	14qE2.3	Mus musculus MYC binding protein 2 (Mycbp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; The process by which a branchiomotor neuron growth cone is directed to a specific target site. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx [goid 21785] [evidence IMP]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process by which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron [goid 48667] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]; Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 51493] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pam; R75243; AW107953; C130061D10Rik; AW546647; AU023734	Pam; R75243; AW107953; C130061D10Rik; AW546647; AU023734
Mus musculus	RefSeq	ILMN_198364	ILMN_198364	LOC225468	XM_140321.2	XM_140321.2			38084465	XM_140321.2	LOC225468		ILMN_2531426	003850762	S	1665	CTTGAAGACCTCCAGCCCAAAGGCCAGGGAACTCCAGAGCAAGGGGAACA										
Mus musculus	RefSeq	ILMN_222642	ILMN_222642	KLHL12	NM_153128.2	NM_153128.2		240756	118130142	NM_153128.2	Klhl12	NP_694768.1	ILMN_2752702	001340612	S	2345	CCAAGAAGGAAGATTCATGCTGTCCTCACTTAGGAAGACATTGTTGGTGC	1	+	136386599-136386648	1qE4	Mus musculus kelch-like 12 (Drosophila) (Klhl12), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C3ip1; MGC7076	C3ip1; MGC7076
Mus musculus	RefSeq	ILMN_221031	ILMN_221031	H2-M10.1	NM_013544.2	NM_013544.2		14985	34328212	NM_013544.2	H2-M10.1	NP_038572.2	ILMN_2730154	000020707	S	500	GAAGAGCAGGTGGGAGGATGCAGGTGAAGCAAAACGGAGGAAGACTTACC	17	-	36529542-36529591	17qB1	Mus musculus histocompatibility 2, M region locus 10.1 (H2-M10.1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9.5H	9.5H
Mus musculus	RefSeq	ILMN_221031	ILMN_221031	H2-M10.1	NM_013544.2	NM_013544.2		14985	34328212	NM_013544.2	H2-M10.1	NP_038572.2	ILMN_2856391	006220600	S	1066	CCATGTGTCTGTATCCTGTCAAAAAGAGACAGGTCTGGGAGACCTCCAGC	17	-	36527548-36527597	17qB1	Mus musculus histocompatibility 2, M region locus 10.1 (H2-M10.1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9.5H	9.5H
Mus musculus	RefSeq	ILMN_213026	ILMN_213026	CTSZ	NM_022325.4	NM_022325.4		64138	133892749	NM_022325.4	Ctsz	NP_071720.1	ILMN_2666007	004150725	S	1135	CTGCATCCCGAGAGGAGACGGTAAAGGATGAAACACAACTGCACTGGGAC	2	-	174253203-174253252	2qH4	Mus musculus cathepsin Z (Ctsz), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	AI787083; AU019819; CTSX; D2Wsu143e	AI787083; AU019819; CTSX; D2Wsu143e
Mus musculus	RefSeq	ILMN_188197	ILMN_188197	TRIM33	NM_053170.2	NM_053170.2		94093	119637827	NM_053170.2	Trim33	NP_444400.2	ILMN_2450590	003460594	S	4295	TGTCTGATAATTGGTGCAGGATACTGAGTTGGGCAAGCCTGCGAGATGTG	3	+	103158118-103158167	3qF2.2	Mus musculus tripartite motif-containing 33 (Trim33), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DKFZp586K1123; mKIAA1113; Tif1g; AI413936; 8030451N04Rik	DKFZp586K1123; mKIAA1113; Tif1g; AI413936; 8030451N04Rik
Mus musculus	RefSeq	ILMN_188197	ILMN_188197	TRIM33	NM_053170.2	NM_053170.2		94093	119637827	NM_053170.2	Trim33	NP_444400.2	ILMN_1259222	002510270	S	1489	CTGTGAAACGTGTGATAGATTGACGTGTAGAGACTGTCAACTTTTGGAGC	3	+	103115374-103115423	3qF2.2	Mus musculus tripartite motif-containing 33 (Trim33), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DKFZp586K1123; mKIAA1113; Tif1g; AI413936; 8030451N04Rik	DKFZp586K1123; mKIAA1113; Tif1g; AI413936; 8030451N04Rik
Mus musculus	RefSeq	ILMN_188197	ILMN_188197	TRIM33	NM_053170.2	NM_053170.2		94093	119637827	NM_053170.2	Trim33	NP_444400.2	ILMN_1236637	007510315	S	4302	TAATTGGTGCAGGATACTGAGTTGGGCAAGCCTGCGAGATGTGTCTCTGC	3	+	103158125-103158174	3qF2.2	Mus musculus tripartite motif-containing 33 (Trim33), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DKFZp586K1123; mKIAA1113; Tif1g; AI413936; 8030451N04Rik	DKFZp586K1123; mKIAA1113; Tif1g; AI413936; 8030451N04Rik
Mus musculus	RefSeq	ILMN_187010	ILMN_188197	TRIM33	NM_053170.2	NM_053170.2		94093	119637827	NM_053170.2	Trim33	NP_444400.2	ILMN_2440399	006590338	S	8484	TCACAGCCTTACGAGTTCCTTGCTTCCAGGATTTCAACTGGTCTCCCCTC	3	+	103162307-103162356	3qF2.2	Mus musculus tripartite motif-containing 33 (Trim33), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DKFZp586K1123; mKIAA1113; Tif1g; AI413936; 8030451N04Rik	DKFZp586K1123; mKIAA1113; Tif1g; AI413936; 8030451N04Rik
Mus musculus	RefSeq	ILMN_188197	ILMN_188197	TRIM33	NM_053170.2	NM_053170.2		94093	119637827	NM_053170.2	Trim33	NP_444400.2	ILMN_2514776	002760059	S	5527	GCCTCTCAAAAAGTTCAAAGTAAGGAGTTCAGACTGTAGACCTCCTCAGA	3	+	103159350-103159399	3qF2.2	Mus musculus tripartite motif-containing 33 (Trim33), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DKFZp586K1123; mKIAA1113; Tif1g; AI413936; 8030451N04Rik	DKFZp586K1123; mKIAA1113; Tif1g; AI413936; 8030451N04Rik
Mus musculus	MEEBO	ILMN_211666	ILMN_211666	5830403M04RIK	scl27540.5.1_5	NM_175230.2			31340657	NM_175230.2	5830403M04Rik		ILMN_2618321	002750731	S	1120	GTCTTGATGGGGGTTAGAGGTTAAGGGAAAGAGAGATGGAACAGAAGACA										
Mus musculus	MEEBO	ILMN_186746	ILMN_186746	SCL0003073.1_164	scl0003073.1_164	BC022635.1			21961417	BC022635.1	scl0003073.1_164		ILMN_2438153	004640541	S	20	GGTTTACCCGCATGCACCTCACTTAAAGAAGTTTGCACCACACTGCGTGT										
Mus musculus	Riken	ILMN_202226	ILMN_202226	4930415O10RIK	ri|4930415O10|PX00030M04|AK015153|1311					AK015153	4930415O10Rik		ILMN_2547951	006370053	S	1	GGAGAAGTCAACGTCACGCTTTACAACAAGTACTTCCACCAAGTGCTCAC										
Mus musculus	RefSeq	ILMN_200278	ILMN_200278	LOC384243	XM_357517.1	XM_357517.1			38081193	XM_357517.1	LOC384243		ILMN_1254402	005290095	S	372	GCTCCTTCACACACATTTAGTGGATGATTCCTCCAAAGCCAAGTTCAGCC										
Mus musculus	MEEBO	ILMN_212397	ILMN_212397	NEURL	scl0018011.1_315				40254531	NM_021360	Neurl		ILMN_2625940	000730754	S	3918	GCACTGCCTCCCTTGTGAACTGGGCCACTGTGTTTGTGAATAAAGGTGAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus [goid 9605] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The assembly and organization of the sperm flagellar axoneme, the bundle of microtubules and associated proteins that forms the core of the eukaryotic sperm flagellum, and is responsible for movement [goid 7288] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187624	ILMN_187624	4833419G08RIK	scl14844.1.1_128						4833419G08Rik		ILMN_2445723	003130358	S	6	CCCTTTAGGAAAGGTAAAACGGAAACGAAAGCAAGGGCGGTGGAGTGTTT										
Mus musculus	RefSeq	ILMN_184230	ILMN_184230	TSHR	NM_011648.4	NM_011648.4		22095	133892366	NM_011648.4	Tshr	NP_035778.3	ILMN_1258209	005490400	S	668	TACCTGACAGCTATAGACAACGATGCCTTTGGAGGAGTATACAGTGGACC	12	+	92757727-92757776	12qD3	Mus musculus thyroid stimulating hormone receptor (Tshr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Any process that modulates the frequency, rate or extent of locomotion of a cell or organism [goid 40012] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Combining with thyroid-stimulating hormone to initiate a change in cell activity [goid 4996] [evidence IDA]	hypothroid; pet; hyt	hypothroid; pet; hyt
Mus musculus	RefSeq	ILMN_215963	ILMN_215963	TEK	NM_013690.2	NM_013690.2		21687	111185950	NM_013690.2	Tek	NP_038718.2	ILMN_1220170	002360519	S	4243	CTCACCTGCAGAAGCCAGTTTGTTTGGCCATGTGACAATTGTCCTGTGTT	4	+	94541219-94541268	4qC5	Mus musculus endothelial-specific receptor tyrosine kinase (Tek), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISM]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IDA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Hyk; Cd202b; Tie2; AA517024	Hyk; Cd202b; Tie2; AA517024
Mus musculus	RefSeq	ILMN_213698	ILMN_213698	NUCB1	NM_008749.1	NM_008749.1		18220	6679157	NM_008749.1	Nucb1	NP_032775.1	ILMN_2639809	005820341	S	1972	CTAGCTGAGGTCCAACCCTGCTCAGGGCTCCTGAAAATTGGTTCACCAAC	7	-	52748571-52748620	7qB4	Mus musculus nucleobindin 1 (Nucb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Nucb; MTEST82; Calnuc; C77483; B230337F23Rik	Nucb; MTEST82; Calnuc; C77483; B230337F23Rik
Mus musculus	RefSeq	ILMN_213698	ILMN_213698	NUCB1	NM_008749.1	NM_008749.1		18220	6679157	NM_008749.1	Nucb1	NP_032775.1	ILMN_2908735	000520086	S	1779	CTGCCTTCTGTGGAGCCAATGATCTCAATTCCTTTTGGTGGCTAGAGGCC	7	-	52748764-52748813	7qB4	Mus musculus nucleobindin 1 (Nucb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Nucb; MTEST82; Calnuc; C77483; B230337F23Rik	Nucb; MTEST82; Calnuc; C77483; B230337F23Rik
Mus musculus	Riken	ILMN_205917	ILMN_205917	B130021C19RIK	ri|B130021C19|PX00157B09|AK045040|3568					AK045040	B130021C19Rik		ILMN_1239950	002650242	S	3079	ACTAATTATGCATTTAACACCACCTAGCATCCAGGCTGTGCCCGTGGCGG										
Mus musculus	Riken	ILMN_205098	ILMN_205098	D630041L13RIK	ri|D630041L13|PX00198K18|AK052744|2222					AK052744	D630041L13Rik		ILMN_1217805	005360730	S	2101	GTAAGGAGTGTGAGGAGTGACTCGTAAGCACCTGTCTTCCCTTCTCACTC										
Mus musculus	RefSeq	ILMN_244845	ILMN_244845	OLFR1181	NM_001011816.1	NM_001011816.1		258060	58801397	NM_001011816.1	Olfr1181	NP_001011816.1	ILMN_3160858	005700692	S	677	ACTCAGCAGAAGGGAGACGCAAAGCTCTTTCAACCTGTGGGTCCCATATA	2	-	88263454-88263503	2qD	Mus musculus olfactory receptor 1181 (Olfr1181), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR225-9P	MOR225-9P
Mus musculus	RefSeq	ILMN_191217	ILMN_231668	MYO6	NM_001039546.1	NM_001039546.1		17920	88196799	NM_001039546.1	Myo6	NP_001034635.1	ILMN_2656854	003940687	S	5420	GTTTTCTTATGGAGGCTGTCTTACTGCTTAGACTTACCCTCTGTTGGTCC	9	+	80157094-80157143	9qE1	Mus musculus myosin VI (Myo6), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IPI]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IPI]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IPI]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BC029719; sv	BC029719; sv
Mus musculus	RefSeq	ILMN_191217	ILMN_231668	MYO6	NM_001039546.1	NM_001039546.1		17920	88196799	NM_001039546.1	Myo6	NP_001034635.1	ILMN_2477172	003610255	S	7605	AAGTATTATAGGAGATAGTTAGGAAAAATTAATGCACATTGAAAACTGCA	9	+	80159279-80159328	9qE1	Mus musculus myosin VI (Myo6), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IPI]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IPI]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IPI]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BC029719; sv	BC029719; sv
Mus musculus	RefSeq	ILMN_198293	ILMN_198293	LOC213945	XM_145161.2	XM_145161.2			38083686	XM_145161.2	LOC213945		ILMN_1260347	002070504	S	1546	AGTACAGACACAGTTATGGGACATGGGGGATTTGGGACCTGTGGGACCGC										
Mus musculus	RefSeq	ILMN_220768	ILMN_230703	GBF1	NM_178930.3	NM_178930.3		107338	52138535	NM_178930.3	Gbf1	NP_849261.2	ILMN_2726603	005220148	S	2057	GAAGAAAGAGACAGCCAGACCTGGCTTTGAGGCAGTGGATGGCAACCCAG	19	+	46339796-46339845	19qC3	Mus musculus golgi-specific brefeldin A-resistance factor 1 (Gbf1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0248; 1700083E03Rik; AI035702; MGC100238; AW049900; MGC90745	mKIAA0248; 1700083E03Rik; AI035702; MGC100238; AW049900; MGC90745
Mus musculus	RefSeq	ILMN_230703	ILMN_230703	GBF1	NM_178930.3	NM_178930.3		107338	52138535	NM_178930.3	Gbf1	NP_849261.2	ILMN_2940559	003190452	S	6261	GTTGGTCAGCTTGGAGTTGCTTGGCACCACGGAGGGTGGACAGATAGGAC	19	+	46360860-46360909	19qC3	Mus musculus golgi-specific brefeldin A-resistance factor 1 (Gbf1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0248; 1700083E03Rik; AI035702; MGC100238; AW049900; MGC90745	mKIAA0248; 1700083E03Rik; AI035702; MGC100238; AW049900; MGC90745
Mus musculus	RefSeq	ILMN_191062	ILMN_224314	1700056E22RIK	XM_484951.4	XM_484951.4		73363	149247226	XM_484951.4	1700056E22Rik	XP_484951.2	ILMN_2475761	003780754	S	1114	CTGGAATTCAAAGGAGTGGAAAAGCCCAGATGAACTGTGATGAAGTTGCG	1	-	185857017-185857034:185857035-185857066	1qH5	PREDICTED: Mus musculus RIKEN cDNA 1700056E22 gene (1700056E22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_193225	ILMN_235428	LRRC55	NM_001033346.2	NM_001033346.2		241528	114796638	NM_001033346.2	Lrrc55	NP_001028518.1	ILMN_1215600	000840347	S	2753	AGCCCTGATGTCTGGTGGTGGGAGGGTTAGGGGAGGAATTGGGAAGATGC	2	-	85028325-85028374	2qD	Mus musculus leucine rich repeat containing 55 (Lrrc55), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A330097E02Rik; Gm351	A330097E02Rik; Gm351
Mus musculus	RefSeq	ILMN_218348	ILMN_218348	1700023B02RIK	NM_025854.1	NM_025854.1		66935	13385335	NM_025854.1	1700023B02Rik	NP_080130.1	ILMN_3103784	003890437	A	1171	TGACAGAAATCGGGGAATCCGAAGTCGGAGCCGTAGCCGGGCTGAGAGCA	2	-	73085346-73085395	2qC3	Mus musculus RIKEN cDNA 1700023B02 gene (1700023B02Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISA]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cir; MGC117636; Cicr; 2810021A19Rik	Cir; MGC117636; Cicr; 2810021A19Rik
Mus musculus	RefSeq	ILMN_218348	ILMN_218348	1700023B02RIK	NM_025854.1	NM_025854.1		66935	13385335	NM_025854.1	1700023B02Rik	NP_080130.1	ILMN_3030470	002680458	I	1	GGACTCAGACGCCAAGATGGGGAAGTCATTCGCCAATTTCATGTGTAAGA	2	-	73113292-73113327:73113328-73113341	2qC3	Mus musculus RIKEN cDNA 1700023B02 gene (1700023B02Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISA]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cir; MGC117636; Cicr; 2810021A19Rik	Cir; MGC117636; Cicr; 2810021A19Rik
Mus musculus	RefSeq	ILMN_218348	ILMN_218348	1700023B02RIK	NM_025854.1	NM_025854.1		66935	13385335	NM_025854.1	1700023B02Rik	NP_080130.1	ILMN_2694633	005050593	S	1425	CTGGGCATCAAGGACATCTTTAGCAAGGGCTAACATACACATTGTTATCT	2	-	73085092-73085141	2qC3	Mus musculus RIKEN cDNA 1700023B02 gene (1700023B02Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISA]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cir; MGC117636; Cicr; 2810021A19Rik	Cir; MGC117636; Cicr; 2810021A19Rik
Mus musculus	RefSeq	ILMN_190457	ILMN_190457	USP3	NM_144937.2	NM_144937.2		235441	31981744	NM_144937.2	Usp3	NP_659186.1	ILMN_2887131	006770768	S	1776	GGGGTTTAGTTTGGTCAGTGGTAGTGACTTACCCAACATGAGCACCAACT	9	-	66316262-66316311	9qC	Mus musculus ubiquitin specific peptidase 3 (Usp3), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC28886; AA409661; BC017156	MGC28886; AA409661; BC017156
Mus musculus	RefSeq	ILMN_222857	ILMN_222857	OLFR399	NM_147004.1	NM_147004.1		259006	22128930	NM_147004.1	Olfr399	NP_667215.1	ILMN_2755826	002810719	S	478	CTGACCCAAACTGTTGCCTTATCTACTCTTAAATTCTGTGGTCCAAACAC	11	-	73867732-73867781	11qB4	Mus musculus olfactory receptor 399 (Olfr399), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR255-1; RP23-221M24.2	MOR255-1; RP23-221M24.2
Mus musculus	MEEBO	ILMN_215575	ILMN_215575	LOC232060	IGKV5-43_AJ235973_Ig_kappa_variable_5-43_8	XM_132608.2			38084351	XM_132608.2	LOC232060		ILMN_1251451	001030373	S	440	CACACCTCAGATACTTGGACTTATGCTTTTTTGGATTTCAGCCTCCAGAG										
Mus musculus	RefSeq	ILMN_197365	ILMN_197365	LOC277422	XM_205000.3	XM_205000.3			38075354	XM_205000.3	LOC277422		ILMN_2527881	004640286	S	900	GTCGTCTACACAAGCATGAGCGGAGGGAAAGAGTACTAAAGCTCTCAGGA										
Mus musculus	RefSeq	ILMN_211185	ILMN_211185	DPH2	NM_026344.2	NM_026344.2		67728	34328292	NM_026344.2	Dph2	NP_080620.1	ILMN_2847024	003120608	S	2036	CTACTCCTCATTGAGAGCCTCTGGTCTAAACCTGCACTGTCCAAGACAAT	4	-	117387015-117387064	4qD2.1	Mus musculus DPH2 homolog (S. cerevisiae) (Dph2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9130020C19Rik; Dph2l2; AI467389	9130020C19Rik; Dph2l2; AI467389
Mus musculus	RefSeq	ILMN_193801	ILMN_249247	MLH3	NM_175337.1	NM_175337.1		217716	124249061	NM_175337.1	Mlh3	NP_780546.1	ILMN_2500573	000060564	S	3632	TAGTCCTGGTGGACCAGCATGCTGCCCATGAACGCATTCGTTTGGAGCAG	12	-	86591261-86591310	12qD2	Mus musculus mutL homolog 3 (E coli) (Mlh3), mRNA. XM_921016 XM_994145 XM_994168 XM_994183	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A connection formed between chromatids, visible during meiosis, thought to be the point of the interchange involved in crossing-over [goid 5712] [evidence IDA]	The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IMP]; The cell cycle process whereby the first meiotic division occurs in the female germline [goid 7144] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IDA]	MGC100285; BB126472; AV125803	MGC100285; BB126472; AV125803
Mus musculus	RefSeq	ILMN_249247	ILMN_249247	MLH3	NM_175337.1	NM_175337.1		217716	124249061	NM_175337.1	Mlh3	NP_780546.1	ILMN_2971204	005290753	S	5075	AGTACCTGGGAGGCTGAGACAAGTCCGTGACAGGGCACCATTTGCCTAGG	12	-	86575773-86575822	12qD2	Mus musculus mutL homolog 3 (E coli) (Mlh3), mRNA. XM_921016 XM_994145 XM_994168 XM_994183	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A connection formed between chromatids, visible during meiosis, thought to be the point of the interchange involved in crossing-over [goid 5712] [evidence IDA]	The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IMP]; The cell cycle process whereby the first meiotic division occurs in the female germline [goid 7144] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IDA]	MGC100285; BB126472; AV125803	MGC100285; BB126472; AV125803
Mus musculus	RefSeq	ILMN_221023	ILMN_249247	MLH3	NM_175337.1	NM_175337.1		217716	124249061	NM_175337.1	Mlh3	NP_780546.1	ILMN_2743910	004490347	S	979	CGTTCTGCCTCAGAACTCCACGGGATATATGTAATCAATGTGCAGTGCCC	12	-	86609422-86609471	12qD2	Mus musculus mutL homolog 3 (E coli) (Mlh3), mRNA. XM_921016 XM_994145 XM_994168 XM_994183	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A connection formed between chromatids, visible during meiosis, thought to be the point of the interchange involved in crossing-over [goid 5712] [evidence IDA]	The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IMP]; The cell cycle process whereby the first meiotic division occurs in the female germline [goid 7144] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IDA]	MGC100285; BB126472; AV125803	MGC100285; BB126472; AV125803
Mus musculus	RefSeq	ILMN_200132	ILMN_200132	LOC385792	XM_358947.1	XM_358947.1			38080572	XM_358947.1	LOC385792		ILMN_1213185	003800112	S	926	ACTTGAAGGGGAACTGGTCGCAGGAGCTGGAGAGATTGCAGACGAGACTG										
Mus musculus	RefSeq	ILMN_192424	ILMN_192424	TRAM1	NM_028173.3	NM_028173.3		72265	146141086	NM_028173.3	Tram1	NP_082449.1	ILMN_2487934	007040187	S	2570	CTAAAAAATGTCCGTGCCATGTTGACTATAGAAGCCACAAGCCTCAGGCC				1qA3	Mus musculus translocating chain-associating membrane protein 1 (Tram1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		1810049E02Rik; MGC1174; TRAMP	1810049E02Rik; MGC1174; TRAMP
Mus musculus	RefSeq	ILMN_192424	ILMN_192424	TRAM1	NM_028173.3	NM_028173.3		72265	146141086	NM_028173.3	Tram1	NP_082449.1	ILMN_2509139	005910431	S	483	CGAAGCACAGCAAGTTTAACGAGTCTGGTCAGCTCAGTGCATTCTACCTT				1qA3	Mus musculus translocating chain-associating membrane protein 1 (Tram1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		1810049E02Rik; MGC1174; TRAMP	1810049E02Rik; MGC1174; TRAMP
Mus musculus	MEEBO	ILMN_196280	ILMN_196280	SCL0003781.1_22	scl0003781.1_22						scl0003781.1_22		ILMN_2523281	001300100	S	3	TCCTGCGGAGTTGTATAGTAGTGGTGGAGAGCCTAGCCTGCCGCAGCTCA										
Mus musculus	Riken	ILMN_206897	ILMN_206897	E030043O13RIK	ri|E030043O13|PX00206N09|AK087312|2318					AK087312	E030043O13Rik		ILMN_1234008	006560500	S	1907	CAGCCCCAACAAGTGCTGGAATCATAAATGTGTGCCACCATGCCTGGCTC										
Mus musculus	MEEBO	ILMN_221023	ILMN_221023	MLH3	scl42230.12_56				51766938	XM_484162	Mlh3		ILMN_2743912	006590328	S	1019	GCCTCAGAACTCCACGGGATATATGTAATCAATGTGCAGTGCCCTTTCTG						A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A connection formed between chromatids, visible during meiosis, thought to be the point of the interchange involved in crossing-over [goid 5712] [evidence IDA]	The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IMP]; The cell cycle process whereby the first meiotic division occurs in the female germline [goid 7144] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IDA]		
Mus musculus	RefSeq	ILMN_186603	ILMN_260625	WDR34	NM_001008498.2	NM_001008498.2		71820	139948826	NM_001008498.2	Wdr34	NP_001008498.2	ILMN_1233784	002690224	S	1448	ACCCAAGATGGAAGTCCTGTCTACTGTCTCGAGTTTAACAGCCAGCAGAC	2	-	29888099-29888148	2qB	Mus musculus WD repeat domain 34 (Wdr34), mRNA.				3200002I06Rik; MGC103259	3200002I06Rik; MGC103259
Mus musculus	RefSeq	ILMN_210094	ILMN_210094	RPAP1	NM_177294.3	NM_177294.3		68925	37537533	NM_177294.3	Rpap1	NP_796268.2	ILMN_2952049	004390066	S	4643	GTGGAAGGAGGGTGGCTTCAGTGTTTACCCTGCGGTGCCCAGGACAGTCT	2	-	119455490-119455539	2qE5	Mus musculus RNA polymerase II associated protein 1 (Rpap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits [goid 30880] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	AU041788; A730023M06Rik; 1190005L06Rik; mKIAA1403; MGC144181; MGC144180; AW107702	AU041788; A730023M06Rik; 1190005L06Rik; mKIAA1403; MGC144181; MGC144180; AW107702
Mus musculus	RefSeq	ILMN_217250	ILMN_217250	PCSK1	NM_013628.2	NM_013628.2		18548	118129805	NM_013628.2	Pcsk1	NP_038656.1	ILMN_2680894	006550243	S	2256	ATTCTATAACACAAAACCTTATAAGCATAGAGATGACAGGCTGCTGCAAG	13	+	75269686-75269735	13qC1	Mus musculus proprotein convertase subtilisin/kexin type 1 (Pcsk1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [evidence IDA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IDA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	PC3; Phpp-1; MGC124321; PC1; SPC3; Nec1; MGC124320; Nec-1	PC3; Phpp-1; MGC124321; PC1; SPC3; Nec1; MGC124320; Nec-1
Mus musculus	RefSeq	ILMN_198117	ILMN_315778	EG667705	XM_001475654.1	XM_001475654.1		667705	149253499	XM_001475654.1	EG667705	XP_001475704.1	ILMN_1232132	000870300	S	472	CAGCATCAGCCCTGGCATCACAGAGGGCATAGATCCCCAGTGTTGGAACA				5qA1	PREDICTED: Mus musculus predicted gene, EG667705 (EG667705), mRNA.					
Mus musculus	RefSeq	ILMN_231324	ILMN_231324	OLFR426	NM_001011844.1	NM_001011844.1		258134	58801445	NM_001011844.1	Olfr426	NP_001011844.1	ILMN_2920261	007050576	S	658	ATCATTACCGTGGTCTTGAAGATTCCATCTGGTGAGAGCCGTCAGAAGGC	1	+	175936792-175936841	1qH3	Mus musculus olfactory receptor 426 (Olfr426), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR105-8	MOR105-8
Mus musculus	Riken	ILMN_205024	ILMN_205024	A430080F05RIK	ri|A430080F05|PX00138C13|AK040244|2167					AK040244	A430080F05Rik		ILMN_2569416	002810682	S	2010	GGGGGACGTGGGGGGTTGGGTCCTTAGGAGTCACTGCTTTTGTCCCTATT										
Mus musculus	RefSeq	ILMN_214528	ILMN_214528	PDZRN3	NM_018884.1	NM_018884.1		55983	9256641	NM_018884.1	Pdzrn3	NP_061372.1	ILMN_3156010	006660201	A	3902	GCCGCCTGTTGGAAGAATTTGCATGTACAGGGAAGTCGCGGATGGAGACC	6	-	101099755-101099804	6qD3	Mus musculus PDZ domain containing RING finger 3 (Pdzrn3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110020C07Rik; AL023082; LNX3; Semcap3; AI429718	1110020C07Rik; AL023082; LNX3; Semcap3; AI429718
Mus musculus	RefSeq	ILMN_214528	ILMN_214528	PDZRN3	NM_018884.1	NM_018884.1		55983	9256641	NM_018884.1	Pdzrn3	NP_061372.1	ILMN_3077027	006960202	I	209	ACGTCCTGCCCCTCAAGCGTCTCATCCTCAAGTTGGACATCAAGTGCGCG	6	-	101327633-101327682	6qD3	Mus musculus PDZ domain containing RING finger 3 (Pdzrn3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110020C07Rik; AL023082; LNX3; Semcap3; AI429718	1110020C07Rik; AL023082; LNX3; Semcap3; AI429718
Mus musculus	RefSeq	ILMN_214528	ILMN_214528	PDZRN3	NM_018884.1	NM_018884.1		55983	9256641	NM_018884.1	Pdzrn3	NP_061372.1	ILMN_2648937	005310639	S	4001	TGGAAGGGACAGACTTAACCAAGCAAGTTCACAGGATCATGATTAGTTAC	6	-	101099656-101099705	6qD3	Mus musculus PDZ domain containing RING finger 3 (Pdzrn3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110020C07Rik; AL023082; LNX3; Semcap3; AI429718	1110020C07Rik; AL023082; LNX3; Semcap3; AI429718
Mus musculus	Riken	ILMN_203066	ILMN_203066	C030004L23RIK	ri|C030004L23|PX00073L10|AK047648|1726					AK047648	C030004L23Rik		ILMN_1256277	005090274	S	1369	GCAGCCCTTTGCAAGAAGGAGCAGAACCAGACCCCAAATATGGACGTGAC										
Mus musculus	RefSeq	ILMN_194238	ILMN_311799	LOC100047264	XM_001477759.1	XM_001477759.1		100047264	149271293	XM_001477759.1	LOC100047264	XP_001477809.1	ILMN_2504606	004640593	S	452	GGTCTGGATCCCCTAGGGTTGCCACCAGGATCACCAGAAAGTTTGTTAAA					PREDICTED: Mus musculus hypothetical protein LOC100047264 (LOC100047264), mRNA.					
Mus musculus	RefSeq	ILMN_189107	ILMN_258500	DNAJC2	NM_009584.3	NM_009584.3		22791	145966886	NM_009584.3	Dnajc2	NP_033610.1	ILMN_1249242	005810246	S	1692	AAGAACATGGAGTGGCCTCTCAGGCTGACAGTGCAGCACCATCAGAACGG				5qA3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 2 (Dnajc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [evidence IMP]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU020218; Zrf1; Zrf2; MIDA1	AU020218; Zrf1; Zrf2; MIDA1
Mus musculus	RefSeq	ILMN_217423	ILMN_258500	DNAJC2	NM_009584.3	NM_009584.3		22791	145966886	NM_009584.3	Dnajc2	NP_033610.1	ILMN_2683044	007560630	S	227	GTTAAGAGGAGAAACAGAAATGCTTCTACATCTTTTCAGGAACTGGAAGA				5qA3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 2 (Dnajc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [evidence IMP]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU020218; Zrf1; Zrf2; MIDA1	AU020218; Zrf1; Zrf2; MIDA1
Mus musculus	RefSeq	ILMN_217423	ILMN_258500	DNAJC2	NM_009584.3	NM_009584.3		22791	145966886	NM_009584.3	Dnajc2	NP_033610.1	ILMN_1233931	000620711	S	1205	CACTTCTCGGACAATGAGGCAGACCGTGTTAAAATGATGGAAGAGGTGGA				5qA3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 2 (Dnajc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [evidence IMP]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU020218; Zrf1; Zrf2; MIDA1	AU020218; Zrf1; Zrf2; MIDA1
Mus musculus	MEEBO	ILMN_223913	ILMN_223913	OLFR1246	scl4273.1.1_68				22129268	NM_146792	Olfr1246		ILMN_2771395	003830402	S	623	TCTTTATCCTTCTCATAGTGTCTTATGGAATCATCCTTAAATCTCTCAAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_241910	ILMN_241910	TBC1D2B	NM_194334.2	NM_194334.2		67016	57165376	NM_194334.2	Tbc1d2b	NP_919315.2	ILMN_2819859	005420397	S	5534	GGGGCTACTTCTAGCCGTGATAACACCCGAACAGCAGTCACTGGTCAGCA	9	-	90097237-90097286	9qE3.1	Mus musculus TBC1 domain family, member 2B (Tbc1d2b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AW491493; AI480956; AV023399; AV021536; mKIAA1055; 1810061M12Rik	AW491493; AI480956; AV023399; AV021536; mKIAA1055; 1810061M12Rik
Mus musculus	RefSeq	ILMN_207125	ILMN_241910	TBC1D2B	NM_194334.2	NM_194334.2		67016	57165376	NM_194334.2	Tbc1d2b	NP_919315.2	ILMN_1213519	001740450	S	3094	AGCTGCACTTTCTCATCTCCCATTTCGGGGCAGGGGGCAGGTGGCTTTAC	9	-	90099677-90099726	9qE3.1	Mus musculus TBC1 domain family, member 2B (Tbc1d2b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AW491493; AI480956; AV023399; AV021536; mKIAA1055; 1810061M12Rik	AW491493; AI480956; AV023399; AV021536; mKIAA1055; 1810061M12Rik
Mus musculus	RefSeq	ILMN_187185	ILMN_241910	TBC1D2B	NM_194334.2	NM_194334.2		67016	57165376	NM_194334.2	Tbc1d2b	NP_919315.2	ILMN_2441909	002710519	S	5432	TATTTATATCAACCCGAGCCTCCCAGATTGCAGGTCCCTCTTGTGCCACC	9	-	90097339-90097388	9qE3.1	Mus musculus TBC1 domain family, member 2B (Tbc1d2b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AW491493; AI480956; AV023399; AV021536; mKIAA1055; 1810061M12Rik	AW491493; AI480956; AV023399; AV021536; mKIAA1055; 1810061M12Rik
Mus musculus	RefSeq	ILMN_192917	ILMN_244293	CPNE9	NM_170673.3	NM_170673.3		211232	76881815	NM_170673.3	Cpne9	NP_733773.2	ILMN_1259738	000650224	S	2578	CAGGACAGACCCATAGCTTTCATGAGATTTTCTAAAAGGTTCTTCACCCC	6	+	113255364-113255413	6qE3	Mus musculus copine family member IX (Cpne9), mRNA.				mKIAA4217; KIAA4217; A730016F12Rik	mKIAA4217; KIAA4217; A730016F12Rik
Mus musculus	RefSeq	ILMN_192917	ILMN_244293	CPNE9	NM_170673.3	NM_170673.3		211232	76881815	NM_170673.3	Cpne9	NP_733773.2	ILMN_1255211	006400397	S	1961	GCCCCCTGACTTCAGAAAGGCTTGGCATGATCACCACCTACCGCCTCATG	6	+	113254747-113254796	6qE3	Mus musculus copine family member IX (Cpne9), mRNA.				mKIAA4217; KIAA4217; A730016F12Rik	mKIAA4217; KIAA4217; A730016F12Rik
Mus musculus	RefSeq	ILMN_221992	ILMN_221992	GANC	NM_172672.2	NM_172672.2		76051	124487338	NM_172672.2	Ganc	NP_766260.2	ILMN_2791357	003850176	S	4280	CATTTGTGGGGCCTGCCTCGGCTTGTGTAGCAAGCTCACTCCGACTGTAG	2	+	120286064-120286113	2qE5	Mus musculus glucosidase, alpha; neutral C (Ganc), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IDA]	9330160A12; mFLJ00088; FLJ00088; 5830445O15Rik	9330160A12; mFLJ00088; FLJ00088; 5830445O15Rik
Mus musculus	RefSeq	ILMN_217399	ILMN_221992	GANC	NM_172672.2	NM_172672.2		76051	124487338	NM_172672.2	Ganc	NP_766260.2	ILMN_1226527	005560189	S	3834	TGTCTCTGCGCATTGGTGAGGACTGGGAAGTCCGTGTGGGCTGATGAGCA	2	+	120285618-120285661:120285662-120285667	2qE5	Mus musculus glucosidase, alpha; neutral C (Ganc), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IDA]	9330160A12; mFLJ00088; FLJ00088; 5830445O15Rik	9330160A12; mFLJ00088; FLJ00088; 5830445O15Rik
Mus musculus	RefSeq	ILMN_221992	ILMN_221992	GANC	NM_172672.2	NM_172672.2		76051	124487338	NM_172672.2	Ganc	NP_766260.2	ILMN_2791355	005550187	S	4696	GGGCTGGGACTAGAATAGCACAGGGATTGGCACTTGTCTTAGGCACGACC	2	+	120286480-120286529	2qE5	Mus musculus glucosidase, alpha; neutral C (Ganc), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IDA]	9330160A12; mFLJ00088; FLJ00088; 5830445O15Rik	9330160A12; mFLJ00088; FLJ00088; 5830445O15Rik
Mus musculus	RefSeq	ILMN_206743	ILMN_240884	SRGAP2	XM_977264.1	XM_977264.1		14270	94365539	XM_977264.1	Srgap2	XP_982358.1	ILMN_1227469	000610427	S	1273	CTCACGTCAGCAACAGAACTCAACTGAGGCTGAGGACAGTGCCTATTCCC				1qE4	PREDICTED: Mus musculus SLIT-ROBO Rho GTPase activating protein 2, transcript variant 2 (Srgap2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216561	ILMN_216561	PABPN1	NM_019402.1	NM_019402.1		54196	9506944	NM_019402.1	Pabpn1	NP_062275.1	ILMN_2672528	004560561	S	650	CGGACAAAGAGTCAGTGAGGACGTCCCTGGCCTTAGATGAGTCCCTGTTC	14	+	55515809-55515858	14qC3	Mus musculus poly(A) binding protein, nuclear 1 (Pabpn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence TAS]	PAB2; Pabp3; mPABII	PAB2; Pabp3; mPABII
Mus musculus	RefSeq	ILMN_200402	ILMN_243977	4930588N13RIK	XM_905635.2	XM_905635.2		75860	94375784	XM_905635.2	4930588N13Rik	XP_910728.1	ILMN_1255857	004480315	S	115	GCTACCACGATGAAGACAGCATTCACACCTAAAAGAGGGATGGTGCCCGA				5qG3	PREDICTED: Mus musculus RIKEN cDNA 4930588N13 gene, transcript variant 5 (4930588N13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219837	ILMN_219837	TAF10	NM_020024.3	NM_020024.3		24075	46559395	NM_020024.3	Taf10	NP_064408.2	ILMN_2995129	002480373	S	611	GGAGGACTTGACCCCTGCCCTCAGCGAGTATGGCATCAATGTGAAGAAGC	7	-	112891504-112891553	7qE3	Mus musculus TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf10), mRNA.	A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence TAS]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	AU041226; 30kDa; Taf2h; TAFII30	AU041226; 30kDa; Taf2h; TAFII30
Mus musculus	RefSeq	ILMN_193325	ILMN_310886	LOC100045419	XM_001474240.1	XM_001474240.1		100045419	149261574	XM_001474240.1	LOC100045419	XP_001474290.1	ILMN_1258647	004810110	S	1407	AAGCAGGTGAGGGACCGGAGGACCTGGGAGATGGAGGTCCCCTCCTTTAT					PREDICTED: Mus musculus similar to helios (LOC100045419), mRNA.					
Mus musculus	RefSeq	ILMN_216340	ILMN_310886	LOC100045419	XM_001474240.1	XM_001474240.1		100045419	149261574	XM_001474240.1	LOC100045419	XP_001474290.1	ILMN_1228038	006770470	S	1898	CCCAGGATGAACTACACGTATGTGCCCGTCAACCATTCCACCCTTGTCCC					PREDICTED: Mus musculus similar to helios (LOC100045419), mRNA.					
Mus musculus	MEEBO	ILMN_214551	ILMN_214551	CGN	scl070737.1_295	XM_131052.4			38077876	XM_131052.4	Cgn		ILMN_2696255	001770709	S	2186	GGACTTAGAGCAGGCCCGAGCCAGTACAAGAGATACTCACCAGGTTGAGG						A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence NAS]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198204	ILMN_198204	LOC333782	XM_289894.2	XM_289894.2			38082809	XM_289894.2	LOC333782		ILMN_1253645	002570296	S	1098	GGCTGCTCAGGATGAAACAGATGCTATAGTCAGGAAAGGAGTGTTCCCCC										
Mus musculus	RefSeq	ILMN_198412	ILMN_198412	LOC330074	XM_282777.2	XM_282777.2			38084888	XM_282777.2	LOC330074		ILMN_2531597	005310711	S	490	CCCAAGCTAAAGCATAGCGGTTACAGTTCCGTGAAAAGATGGACTGGAGG										
Mus musculus	MEEBO	ILMN_222708	ILMN_222708	PTPRH	scl0399642.2_8	NM_207270.1			46402288	NM_207270.1	Ptprh		ILMN_1253963	001410315	S	3091	CTCCTGTGGTCCAAGTGCAGGAAGGGCTGGTATACTTCAACTGTGAGCCC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213035	ILMN_213035	1810046K07RIK	scl35864.6.1_30	XM_134800.2			23592544	XM_134800.2	1810046K07Rik		ILMN_1245825	003830484	S	1055	CAAATGTTTTGTGGATCACATCCTAATGAGACAACCTTCACAAGGAGGCC										
Mus musculus	RefSeq	ILMN_202411	ILMN_247258	1700008G05RIK	NM_029310.1	NM_029310.1		75497	58037414	NM_029310.1	1700008G05Rik	NP_083586.1	ILMN_2549416	005550670	S	517	AGCTGGGAGAGGAGTTTGAGGAAACCACACCAAGTGGCCGCAAAAGCAAG	3	-	10247714-10247714:10250040-10250088	3qA1	Mus musculus RIKEN cDNA 1700008G05 gene (1700008G05Rik), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215722	ILMN_247258	1700008G05RIK	NM_029310.1	NM_029310.1		75497	58037414	NM_029310.1	1700008G05Rik	NP_083586.1	ILMN_1242278	001240193	S	2112	GGGCTCAAATCCCTTGAAAAACAAGCCCCCAGTGACCTTATGCCCTCCAG	3	-	10244559-10244608	3qA1	Mus musculus RIKEN cDNA 1700008G05 gene (1700008G05Rik), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217499	ILMN_217499	GPT1	NM_182805.1	NM_182805.1		76282	33413403	NM_182805.1	Gpt1	NP_877957.1	ILMN_2832524	000520634	S	1608	GGGCCACACTGGATGCTCTCTGACTCAACAAACTGAGGGTCCTTGGGAGC	15	+	76524631-76524680	15qD3	Mus musculus glutamic pyruvic transaminase 1, soluble (Gpt1), mRNA.				2310022B03Rik; Gpt-1; 1300007J06Rik; ALT	2310022B03Rik; Gpt-1; 1300007J06Rik; ALT
Mus musculus	MEEBO	ILMN_217759	ILMN_217759	THRA	scl0001499.1_97	NM_178060.2			31342307	NM_178060.2	Thra		ILMN_1257365	006660187	S	1637	AGGTCTTTGAGGATCAGGAAGTCTAAAGCCTCAGGCGGCCAGAGGGTGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Combining with thyroid hormone to initiate a change in cell activity [goid 4887] [evidence TAS]		
Mus musculus	RefSeq	ILMN_212917	ILMN_212917	GSBS	NM_011153.3	NM_011153.3		19051	118129788	NM_011153.3	Gsbs	NP_035283.1	ILMN_1253073	000150056	S	1189	GCAAGAATAAAAGACATCAAAGGCAGAGGATGCTGGTCTATGTAGGGAGG	6	+	55982133-55982182	6qB3	Mus musculus G substrate (Gsbs), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]		Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IDA];  [goid 4865] [evidence IDA]	Ppp1r2	Ppp1r2
Mus musculus	RefSeq	ILMN_212117	ILMN_212117	C730048C13RIK	NM_177002.3	NM_177002.3		319800	142358998	NM_177002.3	C730048C13Rik	NP_795976.1	ILMN_1214504	000510292	S	1770	CCTGACTCCATCCATGATGTAGGAAATGATTGGAAAGAGTCAAGACAAGC	19	-	8410290-8410311:8411213-8411240	19qA	Mus musculus RIKEN cDNA C730048C13 gene (C730048C13Rik), mRNA.				UST1R	UST1R
Mus musculus	Riken	ILMN_207118	ILMN_207118	KIF1B	ri|E130317N11|PX00675H11|AK087544|2524					AK087544	Kif1b		ILMN_1219236	004730053	S	1118	AGCAATAACCAAGGCAAATGTGGGAGAGGGGCTGCGAGGGCTGTTGGCGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence NAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence TAS]		
Mus musculus	RefSeq	ILMN_199729	ILMN_310766	LOC674707	XR_031381.1	XR_031381.1		674707	149251512	XR_031381.1	LOC674707		ILMN_1227803	002630192	S	346	GGCGGTATAATGGTGAAGTCAGTAGGTGCGCCCAGGCCAAACAGTGGATG					PREDICTED: Mus musculus similar to Rpl17 protein (LOC674707), misc RNA.					
Mus musculus	RefSeq	ILMN_208961	ILMN_208961	RARS	NM_025936.1	NM_025936.1		104458	19882224	NM_025936.1	Rars	NP_080212.1	ILMN_2591217	001430603	S	1386	ACGTTCAGGTGAAACTGTGCGCCTTATGGACCTGCTGGAAGAAGGGCTGA	11	-	35659103-35659152	11qA4	Mus musculus arginyl-tRNA synthetase (Rars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]	2610037E21Rik; 2610011N19Rik; AL033339; AW985894	2610037E21Rik; 2610011N19Rik; AL033339; AW985894
Mus musculus	RefSeq	ILMN_208961	ILMN_208961	RARS	NM_025936.1	NM_025936.1		104458	19882224	NM_025936.1	Rars	NP_080212.1	ILMN_2907642	007380279	S	1722	TGGACCATGAAAAGGAGTGGAAGCTGGGGCGGTGCATCTTACGGTTCCCC	11	-	35652644-35652693	11qA4	Mus musculus arginyl-tRNA synthetase (Rars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]	2610037E21Rik; 2610011N19Rik; AL033339; AW985894	2610037E21Rik; 2610011N19Rik; AL033339; AW985894
Mus musculus	RefSeq	ILMN_219430	ILMN_219430	BRE	NM_181279.1	NM_181279.1		107976	41281923	NM_181279.1	Bre	NP_851796.1	ILMN_2708811	006840735	S	143	GGGCCGTCACAGAAGCTTTCATTCAAGTCCTGCTCTTATCATCTGCCGAT	5	+	32004416-32004465	5qB1	Mus musculus brain and reproductive organ-expressed protein (Bre), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IDA]	6030405P19Rik; AI429776; B830038C02Rik	6030405P19Rik; AI429776; B830038C02Rik
Mus musculus	RefSeq	ILMN_219430	ILMN_219430	BRE	NM_181279.1	NM_181279.1		107976	41281923	NM_181279.1	Bre	NP_851796.1	ILMN_2763182	006040376	S	1196	AAAAACTACCCATACAGCCCCAGATGGGATGGAAATGAAATGGCCAAGAG	5	+	32359982-32360031	5qB1	Mus musculus brain and reproductive organ-expressed protein (Bre), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IDA]	6030405P19Rik; AI429776; B830038C02Rik	6030405P19Rik; AI429776; B830038C02Rik
Mus musculus	RefSeq	ILMN_210612	ILMN_210612	GRIT	NM_177379.2	NM_177379.2		330914	31340796	NM_177379.2	Grit	NP_796353.1	ILMN_1225037	002570523	S	5290	AGTTGTCCTTGCCACATCCCGACACGCAGATCCATGCAGAATGAGCCCCG	9	+	32068690-32068733:32068734-32068739	9qA4	Mus musculus Rho GTPase-activating protein (Grit), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence ISO]	KIAA0712; mKIAA0712; RICS; GC-GAP; p250GAP; p200RhoGAP	KIAA0712; mKIAA0712; RICS; GC-GAP; p250GAP; p200RhoGAP
Mus musculus	RefSeq	ILMN_219420	ILMN_314444	IL17C	XM_001478613.1	XM_001478613.1		234836	149259306	XM_001478613.1	Il17c	XP_001478663.1	ILMN_2708607	001070296	S	523	CCTACACCAGGATCCTTCGCCTTCCACACCGAGTTCATCCGCGTGCCTGT				8qE1	PREDICTED: Mus musculus interleukin 17C (Il17c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which a myeloid precursor cell acquires the specialized features of a neutrophil [goid 30223] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_253650	ILMN_253650	D3ERTD751E	NM_028667.1	NM_028667.1		73852	21735462	NM_028667.1	D3Ertd751e	NP_082943.1	ILMN_2869100	002350630	S	670	TCAACACACTGCTTGGAGAAGAATGGAGGCAGCCAGAACCAGACCTGTGG	3	+	41852630-41852679	3qB	Mus musculus DNA segment, Chr 3, ERATO Doi 751, expressed (D3Ertd751e), mRNA.				2810009O15Rik; 4930415G15Rik	2810009O15Rik; 4930415G15Rik
Mus musculus	RefSeq	ILMN_214373	ILMN_224623	AF251705	NM_134158.1	NM_134158.1		140497	32189345	NM_134158.1	AF251705	NP_598919.1	ILMN_2647336	006350609	S	1067	GGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAATGCTCTGAGACTT	11	-	114858105-114858154	11qE2	Mus musculus cDNA sequence AF251705 (AF251705), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CLM4; Cd300c; DIgR1; MAIR-II; Igsf7; Lmir2	CLM4; Cd300c; DIgR1; MAIR-II; Igsf7; Lmir2
Mus musculus	Riken	ILMN_205319	ILMN_205319	NEK1	ri|9430031M01|PX00108N18|AK034754|3103					AK034754	Nek1		ILMN_1251702	005890243	S	2641	CACCATGGAGCCCAGCTCACTGCAAGCTTATGATCCTTCTGCTTCAGGCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISA]		
Mus musculus	MEEBO	ILMN_219014	ILMN_219014	BC023488	scl00237221.1_81	NM_146238.2			31559906	NM_146238.2	BC023488		ILMN_1258727	001170465	S	99	GGGGTCCTTTGACTCAATCACACCTAAGGGAGATTGCTCTTCTCCGGACC										
Mus musculus	RefSeq	ILMN_196351	ILMN_196351	CYPT3	NM_173367.2	NM_173367.2		69361	114842382	NM_173367.2	Cypt3	NP_775543.2	ILMN_2664788	006040446	S	354	GAACTTCGATTGATGCGGAGCCAACTGGAGCTGATCGAACCGGAACCGAC	X	+	149993660-149993709	XqF3	Mus musculus cysteine-rich perinuclear theca 3 (Cypt3), mRNA.				MGC58437; Ckt1r1; 1700006H02Rik	MGC58437; Ckt1r1; 1700006H02Rik
Mus musculus	RefSeq	ILMN_196351	ILMN_196351	CYPT3	NM_173367.2	NM_173367.2		69361	114842382	NM_173367.2	Cypt3	NP_775543.2	ILMN_1223356	006100019	S	345	AGTGCTACTGAACTTCGATTGATGCGGAGCCAACTGGAGCTGATCGAACC	X	+	149993651-149993700	XqF3	Mus musculus cysteine-rich perinuclear theca 3 (Cypt3), mRNA.				MGC58437; Ckt1r1; 1700006H02Rik	MGC58437; Ckt1r1; 1700006H02Rik
Mus musculus	RefSeq	ILMN_240478	ILMN_240478	FCER1A	NM_010184.1	NM_010184.1		14125	6753827	NM_010184.1	Fcer1a	NP_034314.1	ILMN_2863390	005290026	S	666	GTTGGTGGCGATTCTGTTTGCTGTGGACACGGGGTTATTGCTCTCAACCG	1	-	175151697-175151746	1qH3	Mus musculus Fc receptor, IgE, high affinity I, alpha polypeptide (Fcer1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of granulocyte macrophage colony-stimulating factor [goid 45425] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-3 [goid 45401] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; The regulated release of serotonin by a cell or group of cells. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells [goid 1820] [evidence IDA]; The regulated release of serotonin by a cell or group of cells. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells [goid 1820] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of type I hypersensitivity, a type of inflammatory response [goid 1812] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mast cell degranulation [goid 43306] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an immunoglobulin of the IgE isotype via the Fc region to initiate a change in cell activity [goid 19767] [evidence IDA]; Combining with an immunoglobulin of the IgE isotype via the Fc region to initiate a change in cell activity [goid 19767] [evidence IMP]; Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IDA]; Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IMP]	Fce1a; FcERI; Fcr-5	Fce1a; FcERI; Fcr-5
Mus musculus	RefSeq	ILMN_196243	ILMN_254166	SLC12A3	NM_019415.1	NM_019415.1		20497	14547896	NM_019415.1	Slc12a3	NP_062288.1	ILMN_1229114	004260377	S	1370	TGATCACAGCCGGCATCTTTGGCGCCACCCTGTCTTCTGCCTTGGCCTGT	8	+	96864701-96864750	8qC5	Mus musculus solute carrier family 12, member 3 (Slc12a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	NCCT; NCC; TSC; AI035291	NCCT; NCC; TSC; AI035291
Mus musculus	RefSeq	ILMN_254166	ILMN_254166	SLC12A3	NM_019415.1	NM_019415.1		20497	14547896	NM_019415.1	Slc12a3	NP_062288.1	ILMN_2797239	005560541	S	2656	AAGCCCCAGGCCGAGCACACCAAGCGGTTTGAGGACATGATTGCACCCTT	8	+	96880282-96880298:96880910-96880942	8qC5	Mus musculus solute carrier family 12, member 3 (Slc12a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	NCCT; NCC; TSC; AI035291	NCCT; NCC; TSC; AI035291
Mus musculus	RefSeq	ILMN_196243	ILMN_254166	SLC12A3	NM_019415.1	NM_019415.1		20497	14547896	NM_019415.1	Slc12a3	NP_062288.1	ILMN_2756550	001780114	S	2815	CGGCAGGTGAGACTGAGTGAGATACTGCTGGATTACTCTCGGGATGCTGC	8	+	96882362-96882411	8qC5	Mus musculus solute carrier family 12, member 3 (Slc12a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	NCCT; NCC; TSC; AI035291	NCCT; NCC; TSC; AI035291
Mus musculus	RefSeq	ILMN_215384	ILMN_215384	IL31RA	NM_139299.1	NM_139299.1		218624	21314847	NM_139299.1	Il31ra	NP_647460.1	ILMN_2658827	000580360	S	3296	GTAGGCCATTTCCTCTGTCTTGTGCTATACCTGGTAGGAGAAGGCACCAA	13	-	113313337-113313386	13qD2.2	Mus musculus interleukin 31 receptor A (Il31ra), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence ISA]	GLM-R; NR10; GPL; CRL3; Glmr	GLM-R; NR10; GPL; CRL3; Glmr
Mus musculus	RefSeq	ILMN_242598	ILMN_242598	2310033E01RIK	NM_001037143.1	NM_001037143.1		641361	85702279	NM_001037143.1	2310033E01Rik	NP_001032220.1	ILMN_2878161	006380022	S	635	CTGGCAGGGGAGAGTGAAGAACCGAGAAGTATGTAACTTGAGGAGCCCTG	7	-	24250463-24250496:24250497-24250512	7qA3	Mus musculus RIKEN cDNA 2310033E01 gene (2310033E01Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219218	ILMN_219218	PIGV	NM_178698.4	NM_178698.4		230801	142350613	NM_178698.4	Pigv	NP_848813.2	ILMN_1240495	006250553	S	3610	GAATTTGGACACACTCCCTCCGACCGTGACAGAAAGCTCAACTTGCCAGC	4	-	133216594-133216643	4qD3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class V (Pigv), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	B330013B03; D430024F16Rik	B330013B03; D430024F16Rik
Mus musculus	RefSeq	ILMN_223515	ILMN_223515	EED	NM_021876.2	NM_021876.2		13626	118130429	NM_021876.2	Eed	NP_068676.1	ILMN_2765015	006060612	S	1875	CAGCATTCGATCAGGCTGAGCTGAATGTAGTGATGTTCACATTGTTTACA	7	-	97103301-97103350	7qE1	Mus musculus embryonic ectoderm development (Eed), mRNA.	A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IDA]; A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12 [goid 35098] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IMP]; The modification of histones by addition of methyl groups [goid 16571] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	l7Rn5; lusk; l(7)5Rn	l7Rn5; lusk; l(7)5Rn
Mus musculus	MEEBO	ILMN_213242	ILMN_213242	A630028O16RIK	scl0380767.1_19	NM_198638.1			38348517	NM_198638.1	A630028O16Rik		ILMN_2635095	005090291	S	3862	GGTCACTCTACACTGACAGATAAGGTTCGCTAATGATGGTCATGTAGCCT										
Mus musculus	RefSeq	ILMN_212934	ILMN_212934	CENPB	NM_007682.2	NM_007682.2		12616	34328104	NM_007682.2	Cenpb	NP_031708.2	ILMN_2631771	006220091	S	2656	CCTTTCCCAGCTTGAATTCAATAAATCTGTCCACTCCCCTTTTGTGGGAG	2	-	131003043-131003092	2qF1	Mus musculus centromere protein B (Cenpb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209334	ILMN_209334	MYG1	NM_021713.1	NM_021713.1		60315	11096331	NM_021713.1	Myg1	NP_068359.1	ILMN_2594821	005220736	S	763	AGCAGTGCGGGACTTGTCTATTTGCACTTCGGACGTAAGCTCCTGGCCCA	15	+	102165227-102165257:102165363-102165381	15qF3	Mus musculus melanocyte proliferating gene 1 (Myg1), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5830429P19Rik; AI325965; Gamm1; 0610023A07Rik; 2810433J21Rik	5830429P19Rik; AI325965; Gamm1; 0610023A07Rik; 2810433J21Rik
Mus musculus	RefSeq	ILMN_208656	ILMN_208656	S3-12	NM_020568.2	NM_020568.2		57435	142375035	NM_020568.2	S3-12	NP_065593.1	ILMN_2588249	002760437	S	5610	CCTTAGTGTCTGCTTCACTCAAGCTGGTAGAACAGGCTACTCGCTGCACT	17	-	56240110-56240159	17qD	Mus musculus plasma membrane associated protein, S3-12 (S3-12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]			mKIAA1881	mKIAA1881
Mus musculus	RefSeq	ILMN_236940	ILMN_236940	TIPIN	NM_025372.1	NM_025372.1		66131	21313607	NM_025372.1	Tipin	NP_079648.1	ILMN_2968907	003990326	S	791	CACTGCTGATGGTCCACATGATGTTCCTTTCGCCAGTACACATGAAGAGG	9	+	64102378-64102427	9qC	Mus musculus timeless interacting protein (Tipin), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that prevents the collapse of stalled replication forks [goid 48478] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110018P21Rik; 1110005A05Rik	1110018P21Rik; 1110005A05Rik
Mus musculus	RefSeq	ILMN_212306	ILMN_212306	FGF20	NM_030610.1	NM_030610.1		80857	13447395	NM_030610.1	Fgf20	NP_085113.1	ILMN_2624939	005310338	S	574	CCAAGACCAGTAGACCCAGAAAGAGTTCCAGAATTATACAAAGACCTACT	8	-	41365126-41365175	8qA4	Mus musculus fibroblast growth factor 20 (Fgf20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	Riken	ILMN_203386	ILMN_203386	4933403K19RIK	ri|4933403K19|PX00019I15|AK030157|2812					AK030157	4933403K19Rik		ILMN_1258094	001990315	S	2634	GGCCAGAGTGGACTACATAGTGAGTTTGAGGCAACCCCAGGCTACATAGG										
Mus musculus	RefSeq	ILMN_212653	ILMN_212653	ITGAE	NM_172944.1	NM_172944.1		16407	27370455	NM_172944.1	Itgae	NP_766532.1	ILMN_2628899	006450471	S	2682	CCCAAGCCAGTTGCTTCTGTCCTGGTCATGAACTGCAAGATTGGTCACCC	11	+	72947148-72947197	11qB4	Mus musculus integrin, alpha E, epithelial-associated (Itgae), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	A530055J10; CD103; alpha-E1	A530055J10; CD103; alpha-E1
Mus musculus	RefSeq	ILMN_220467	ILMN_220467	PEX13	NM_023651.2	NM_023651.2		72129	31543470	NM_023651.2	Pex13	NP_076140.2	ILMN_2853360	003370327	S	3307	GCATGCGCCACCACCGCTCGGCCTGTGTCCATTCTTTATTAAAGTCTTAG	11	-	23547244-23547293	11qA3.2	Mus musculus peroxisomal biogenesis factor 13 (Pex13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence ISO]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process by which a complex formed of a peroxisome targeting sequence (PTS) receptor bound to a PTS-bearing protein docks with translocation machinery in the preoxisomal membrane [goid 16560] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; Pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway [goid 1561] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The microtubule-based process by which a peroxisome is transported to, and/or maintained in, a specific location. A peroxisome is a small membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 60152] [evidence IMP]	Interacting selectively with a peroxisomal targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome [goid 268] [evidence TAS]	2610008O20Rik	2610008O20Rik
Mus musculus	Riken	ILMN_202157	ILMN_202157	3110012M05RIK	ri|3110012M05|ZX00070P18|AK014045|1195					AK014045	3110012M05Rik		ILMN_1219662	002510349	S	426	AGCTACTGTACAACCTTCGGGTCCTAACCTGGATCCCAGCGAGACCTGTA										
Mus musculus	RefSeq	ILMN_214463	ILMN_214463	E2F4	NM_148952.1	NM_148952.1		104394	22507328	NM_148952.1	E2f4	NP_683754.1	ILMN_2794796	006290376	S	1761	TAGGAGTCTGGGAGGGTTGGTACCTAAGAATGGCTCCAGCTCCTGCCCAC	8	+	107829038-107829087	8qD3	Mus musculus E2F transcription factor 4 (E2f4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IMP]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IMP]; Any process that regulates transcription such that the target genes are transcribed during the G1/S phase of the mitotic cell cycle [goid 83] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that regulates transcription such that the target genes are transcribed during the G1/S phase of the mitotic cell cycle [goid 83] [evidence IDA]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2064] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	2010111M04Rik; AI427446	2010111M04Rik; AI427446
Mus musculus	RefSeq	ILMN_201616	ILMN_220097	ATP5F1	NM_009725.3	NM_009725.3		11950	142357222	NM_009725.3	Atp5f1	NP_033855.2	ILMN_1249817	005050315	S	760	CCTTTACCCTAAGACTGGTGTAACAGGACCTTATGTGCTTGGAACTGGAC	3	-	105757075-105757099:105758814-105758838	3qF2.2	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1 (Atp5f1), nuclear gene encoding mitochondrial protein, mRNA.	All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	C76477	C76477
Mus musculus	RefSeq	ILMN_209862	ILMN_209862	ADRBK2	NM_177078.3	NM_177078.3		320129	78711829	NM_177078.3	Adrbk2	NP_796052.2	ILMN_1216334	003830327	S	1751	TCTCACACAGTGGCAAAGACGCTATTTTTACCTGTTCCCCAACAGACTGG	5	-	113347871-113347920	5qF	Mus musculus adrenergic receptor kinase, beta 2 (Adrbk2), transcript variant 1, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor [goid 47696] [evidence IEA]	AI851927; Adrbk-2; 4833444A01Rik; GRK3; AW551196; Bark-2	AI851927; Adrbk-2; 4833444A01Rik; GRK3; AW551196; Bark-2
Mus musculus	RefSeq	ILMN_243663	ILMN_243663	TNFRSF22	NM_023680.2	NM_023680.2		79202	34328313	NM_023680.2	Tnfrsf22	NP_076169.2	ILMN_2892413	004640220	S	2079	CACTGCTTAGTAAATTTCCCCTTGGCTAGGGGTGCGGTCAGTGCTGTGCC	7	-	150823108-150823157	7qF5	Mus musculus tumor necrosis factor receptor superfamily, member 22 (Tnfrsf22), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]	Interacting selectively with TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines [goid 45569] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	Tnfrh2; SOBa; mDcTrailr2; C130035G06Rik; Tnfrsf1al2; 2810028K06Rik	Tnfrh2; SOBa; mDcTrailr2; C130035G06Rik; Tnfrsf1al2; 2810028K06Rik
Mus musculus	Riken	ILMN_205700	ILMN_205700	B430202K04RIK	ri|B430202K04|PX00071E21|AK046601|1937					AK046601	B430202K04Rik		ILMN_1215407	006280519	S	1749	GCTGGGACTCTCTCATCTCCAGCTTCCCTATCTCAAGTAGAAAGCACTGC										
Mus musculus	Riken	ILMN_205015	ILMN_205015	A130053N17RIK	ri|A130053N17|PX00124M18|AK037844|2245					AK037844	A130053N17Rik		ILMN_1239630	004730424	S	2141	GCTTTGTGGCCTAGAAGGTGGTCTAATCTTGAGACAGACCCTTGGGCTGC										
Mus musculus	MEEBO	ILMN_184346	ILMN_184346	TUBE1	scl39015.9_321	XM_125543.4			38090841	XM_125543.4	Tube1		ILMN_1250535	004760408	S	20	TACTACCTAAGACACAGCAGGTTCCTTACTGCATGTCACACAGTTTGGGC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	Riken	ILMN_204725	ILMN_204725	B930014F01RIK	ri|B930014F01|PX00162P06|AK047054|4076					AK047054	B930014F01Rik		ILMN_1249449	004120435	S	693	TTTTCCCCCCTTTGCACCCAAGGCCAATAGGCTCCATCACTTGACAGCCC										
Mus musculus	RefSeq	ILMN_222387	ILMN_222387	2410003J06RIK	XM_135953.7	XM_135953.7		71967	149271784	XM_135953.7	2410003J06Rik	XP_135953.1	ILMN_1253950	006580307	S	1709	CATAAAACTAATTGGGAAATAATCCCATCTATCTGTACAGTTATCTGGAA	X	-	76868722-76868771	XqB	PREDICTED: Mus musculus RIKEN cDNA 2410003J06 gene, transcript variant 1 (2410003J06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_241821	ILMN_241821	6330534C20RIK	NM_001034059.1	NM_001034059.1		434778	85702180	NM_001034059.1	6330534C20Rik	NP_001029231.1	ILMN_3161819	005860100	S	1018	CTAAGGGTGAAGAACAGCAGGGCTCTGGAGGTGCTTGGAAGACACGTTGC	X	+	50152127-50152176	XqA5	Mus musculus RIKEN cDNA 6330534C20 gene (6330534C20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209772	ILMN_209772	RUNX2	NM_009820.3	NM_009820.3		12393	148747264	NM_009820.3	Runx2	NP_033950.1	ILMN_2599072	005810050	S	1692	CCAGAATGATGGTGTTGACGCTGACGGAAGCCACAGCAGTTCCCCAACTG				17qB3	Mus musculus runt related transcription factor 2 (Runx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone [goid 2051] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [evidence IMP]; Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42487] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cbfa-1; Pebpa2a; Osf2; LS3; AML3; PEBP2aA; Cbf; Cbfa1; Pebp2a1	Cbfa-1; Pebpa2a; Osf2; LS3; AML3; PEBP2aA; Cbf; Cbfa1; Pebp2a1
Mus musculus	RefSeq	ILMN_209772	ILMN_209772	RUNX2	NM_009820.3	NM_009820.3		12393	148747264	NM_009820.3	Runx2	NP_033950.1	ILMN_1220130	003130711	S	729	CCGAAATGCCTCCGCTGTTATGAAAAACCAAGTAGCCAGGTTCAACGATC				17qB3	Mus musculus runt related transcription factor 2 (Runx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone [goid 2051] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [evidence IMP]; Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42487] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cbfa-1; Pebpa2a; Osf2; LS3; AML3; PEBP2aA; Cbf; Cbfa1; Pebp2a1	Cbfa-1; Pebpa2a; Osf2; LS3; AML3; PEBP2aA; Cbf; Cbfa1; Pebp2a1
Mus musculus	RefSeq	ILMN_196911	ILMN_196911	LOC381260	XM_355202.1	XM_355202.1			38049521	XM_355202.1	LOC381260		ILMN_2526227	006590563	S	1724	GAGGCTCATGGGAACAGAGGTGCTTCCACTGGGACAAGACACTGCCCGTT										
Mus musculus	Riken	ILMN_206726	ILMN_206726	UNCX4.1	ri|C230053I05|PX00175J23|AK082472|1197					AK082472	Uncx4.1		ILMN_1250963	006960338	S	1006	TCCATCGTCTTACAAACAGCCGCTGGGGGGGTGCATTTGTGGGAGAGTAG										
Mus musculus	RefSeq	ILMN_201140	ILMN_201140	LOC384860	XM_357901.1	XM_357901.1			38089413	XM_357901.1	LOC384860		ILMN_1216444	003420053	S	424	GACAGAGGGGCCAATGAGACAGAAGGGGGTGATGAAGAGACCGTTGTGGC										
Mus musculus	RefSeq	ILMN_184269	ILMN_237953	C330021H03RIK	XM_912996.2	XM_912996.2		78528	94387877	XM_912996.2	C330021H03Rik	XP_918089.1	ILMN_2417260	005810402	S	474	TTTTAGACCAGTTTCTAGGCTCTGTGTATTCATCAGATTTATGTATTTAG					PREDICTED: Mus musculus RIKEN cDNA C330021H03 gene (C330021H03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210502	ILMN_210502	NTS	NM_024435.2	NM_024435.2		67405	40254499	NM_024435.2	Nts	NP_077755.1	ILMN_2929906	001850095	S	541	GGCAGCTGTATGAAAATAAACCCAGAAGGCCCTACATTCTCAAGAGGGGT	10	-	101944979-101945028	10qD1	Mus musculus neurotensin (Nts), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence TAS]	5033428E16Rik; NMN-125; NN; NT; NT/N; NTS1	5033428E16Rik; NMN-125; NN; NT; NT/N; NTS1
Mus musculus	RefSeq	ILMN_210502	ILMN_210502	NTS	NM_024435.2	NM_024435.2		67405	40254499	NM_024435.2	Nts	NP_077755.1	ILMN_1221615	007320255	S	667	GTGTGAATAAATGTGACAGAACTTGATTATTTCATCTTTTCCCACAATTG	10	-	101944853-101944902	10qD1	Mus musculus neurotensin (Nts), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence TAS]	5033428E16Rik; NMN-125; NN; NT; NT/N; NTS1	5033428E16Rik; NMN-125; NN; NT; NT/N; NTS1
Mus musculus	MEEBO	ILMN_185081	ILMN_185081	ZMYND11	scl0003680.1_26	NM_144516.1			21362286	NM_144516.1	Zmynd11		ILMN_2423999	001820692	S	16	CCATTTGCCTGGAGAGGTGTTGATATGTGACCTGTGTTTTCGTGTGTATC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185081	ILMN_185081	ZMYND11	scl0003680.1_26	NM_144516.1			21362286	NM_144516.1	Zmynd11		ILMN_2497067	000130328	S	18	GGAGCTGAATGTAAGAGCGGATGCTTCAGAACAGACTACCTGGCCGTGAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196735	ILMN_196735	HIST1H2AI	NM_178182.1	NM_178182.1		319191	30061392	NM_178182.1	Hist1h2ai	NP_835489.1	ILMN_2745212	001110390	S	326	GCCCAACATCCAGGCCGTGCTGCTGCCCAAGAAGACCGAGAGCCACCACA	13	+	21808616-21808665	13qA3.1	Mus musculus histone cluster 1, H2ai (Hist1h2ai), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2a-291A	H2a-291A
Mus musculus	RefSeq	ILMN_196735	ILMN_196735	HIST1H2AI	NM_178182.1	NM_178182.1		319191	30061392	NM_178182.1	Hist1h2ai	NP_835489.1	ILMN_1238276	005490193	S	343	GTGCTGCTGCCCAAGAAGACCGAGAGCCACCACAAGGCCAAGGGGAAGTG	13	+	21808633-21808682	13qA3.1	Mus musculus histone cluster 1, H2ai (Hist1h2ai), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2a-291A	H2a-291A
Mus musculus	Riken	ILMN_204466	ILMN_204466	B130010N03RIK	ri|B130010N03|PX00157G06|AK044896|2039					AK044896	B130010N03Rik		ILMN_1231862	005690392	S	1464	CTCCATGGAGGTGTAAGTGATTTTGAATGACCAGGTCCTCTGAAAGCCCC										
Mus musculus	RefSeq	ILMN_239660	ILMN_239660	2810008M24RIK	NM_001048250.1	NM_001048250.1		75616	115392145	NM_001048250.1	2810008M24Rik	NP_001041715.1	ILMN_2950721	004540095	S	1371	GAGTAACATGCTGTAGAGCCAGCAGTGCAGATGCCTTGTGCTGGTGACAC				13qD2.1	Mus musculus RIKEN cDNA 2810008M24 gene (2810008M24Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_190988	ILMN_250693	USP40	NM_001033291.2	NM_001033291.2		227334	133893155	NM_001033291.2	Usp40	NP_001028463.1	ILMN_1256565	004670128	S	2963	AGACTCTTGCGCACTAACTGGCGGCAGCTCAAGGAGTACAGACTGGGCCG	1	-	89848265-89848283:89848915-89848945	1qD	Mus musculus ubiquitin specific peptidase 40 (Usp40), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	B230215L03Rik; C730029K03	B230215L03Rik; C730029K03
Mus musculus	RefSeq	ILMN_190988	ILMN_250693	USP40	NM_001033291.2	NM_001033291.2		227334	133893155	NM_001033291.2	Usp40	NP_001028463.1	ILMN_1217120	001070403	S	215	GGTTTGGAGCCGCCTGCCCCTAGAGAATTCACCAATTTAAGTGGAATCAG	1	-	89903867-89903916	1qD	Mus musculus ubiquitin specific peptidase 40 (Usp40), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	B230215L03Rik; C730029K03	B230215L03Rik; C730029K03
Mus musculus	RefSeq	ILMN_219744	ILMN_219744	RNF182	NM_183204.1	NM_183204.1		328234	34147265	NM_183204.1	Rnf182	NP_899027.1	ILMN_2942628	001440593	S	756	TTCTACAGGCCAGCCAGTTTCGACTCTGTCACCACCGTGTCCCATAACTG	13	+	43679400-43679449	13qA4	Mus musculus ring finger protein 182 (Rnf182), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC107143; C630023L15Rik	MGC107143; C630023L15Rik
Mus musculus	RefSeq	ILMN_196549	ILMN_247332	ZZEF1	NM_001045536.1	NM_001045536.1		195018	113865904	NM_001045536.1	Zzef1	NP_001039001.1	ILMN_1231062	002490300	S	8583	AGGAGTACCTGCTGGCCTTAACCACCGAGGACCACCTTCTCCGATGTGCA	11	+	72726750-72726799	11qB4	Mus musculus zinc finger, ZZ-type with EF hand domain 1 (Zzef1), mRNA.	A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C85424; BC051585; MGC107545; C130099L13Rik; 8430405D05Rik; mKIAA0399	C85424; BC051585; MGC107545; C130099L13Rik; 8430405D05Rik; mKIAA0399
Mus musculus	RefSeq	ILMN_247332	ILMN_247332	ZZEF1	NM_001045536.1	NM_001045536.1		195018	113865904	NM_001045536.1	Zzef1	NP_001039001.1	ILMN_2875000	000650743	S	6010	TGCAGGCCTGTTGGTACCCTGCAACGGAAAGAGAGCTGCAGATACGGAAG	11	+	72704703-72704727:72706764-72706788	11qB4	Mus musculus zinc finger, ZZ-type with EF hand domain 1 (Zzef1), mRNA.	A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C85424; BC051585; MGC107545; C130099L13Rik; 8430405D05Rik; mKIAA0399	C85424; BC051585; MGC107545; C130099L13Rik; 8430405D05Rik; mKIAA0399
Mus musculus	RefSeq	ILMN_193537	ILMN_247332	ZZEF1	NM_001045536.1	NM_001045536.1		195018	113865904	NM_001045536.1	Zzef1	NP_001039001.1	ILMN_2498108	001850204	S	9729	TTCAGGAAGAATCCTGAGGCACCTGCTGTTGAAGGGCAGGCATCTGGCCA	11	+	72731298-72731347	11qB4	Mus musculus zinc finger, ZZ-type with EF hand domain 1 (Zzef1), mRNA.	A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C85424; BC051585; MGC107545; C130099L13Rik; 8430405D05Rik; mKIAA0399	C85424; BC051585; MGC107545; C130099L13Rik; 8430405D05Rik; mKIAA0399
Mus musculus	RefSeq	ILMN_193537	ILMN_247332	ZZEF1	NM_001045536.1	NM_001045536.1		195018	113865904	NM_001045536.1	Zzef1	NP_001039001.1	ILMN_1247767	001070168	S	6533	TGGGCCTGCTCCATGGCAGAGATCCTTCGGTCACTCAACAATGCCCCGTT	11	+	72714150-72714199	11qB4	Mus musculus zinc finger, ZZ-type with EF hand domain 1 (Zzef1), mRNA.	A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C85424; BC051585; MGC107545; C130099L13Rik; 8430405D05Rik; mKIAA0399	C85424; BC051585; MGC107545; C130099L13Rik; 8430405D05Rik; mKIAA0399
Mus musculus	RefSeq	ILMN_197253	ILMN_197253	LOC381372	XM_355336.1	XM_355336.1			38074808	XM_355336.1	LOC381372		ILMN_1231557	005260326	S	210	GGGAGAACCTCAAGACCGGCACGGGATTCCCGAGGACATTAGTGCAGGCA										
Mus musculus	RefSeq	ILMN_186720	ILMN_248055	SLC39A13	NM_026721.2	NM_026721.2		68427	142369701	NM_026721.2	Slc39a13	NP_080997.1	ILMN_2496191	001770452	S	223	AATAAAGAAAGCGAGTCCTGGGGGGCTTTGCTGAGTGGGGAGCGACTGGA	2	-	90908691-90908740	2qE1	Mus musculus solute carrier family 39 (metal ion transporter), member 13 (Slc39a13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AA387663; 1100001L14Rik; MGC118284	AA387663; 1100001L14Rik; MGC118284
Mus musculus	RefSeq	ILMN_186086	ILMN_248055	SLC39A13	NM_026721.2	NM_026721.2		68427	142369701	NM_026721.2	Slc39a13	NP_080997.1	ILMN_2432508	004230086	S	2092	TTGGCTGACACCCAGGTACTCAGCTGGCCCAATCTACAGCCAGACTCCAG	2	-	90902079-90902128	2qE1	Mus musculus solute carrier family 39 (metal ion transporter), member 13 (Slc39a13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AA387663; 1100001L14Rik; MGC118284	AA387663; 1100001L14Rik; MGC118284
Mus musculus	RefSeq	ILMN_186720	ILMN_248055	SLC39A13	NM_026721.2	NM_026721.2		68427	142369701	NM_026721.2	Slc39a13	NP_080997.1	ILMN_1221337	004290270	S	641	TCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCCCGGCCTGAGA	2	-	90905083-90905132	2qE1	Mus musculus solute carrier family 39 (metal ion transporter), member 13 (Slc39a13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AA387663; 1100001L14Rik; MGC118284	AA387663; 1100001L14Rik; MGC118284
Mus musculus	RefSeq	ILMN_213973	ILMN_213973	1110008J03RIK	NM_029096.2	NM_029096.2		100764	142383593	NM_029096.2	1110008J03Rik	NP_083372.1	ILMN_2642876	006560020	S	231	GCATTTCGTATGAGACTGGTTGGCGAGGACTGGAACGCACCACGTTTGCA	5	-	121062298-121062347	5qF	Mus musculus RIKEN cDNA 1110008J03 gene (1110008J03Rik), mRNA.				C86297; AI853657	C86297; AI853657
Mus musculus	RefSeq	ILMN_213973	ILMN_213973	1110008J03RIK	NM_029096.2	NM_029096.2		100764	142383593	NM_029096.2	1110008J03Rik	NP_083372.1	ILMN_2646001	006400427	S	1236	AAACGCCTCCACGGGGTGCCACGGTGAGGATGGGCCATATTGTCCTAGTC	5	-	121059334-121059383	5qF	Mus musculus RIKEN cDNA 1110008J03 gene (1110008J03Rik), mRNA.				C86297; AI853657	C86297; AI853657
Mus musculus	RefSeq	ILMN_217028	ILMN_217028	GZMD	NM_010372.2	NM_010372.2		14941	153791988	NM_010372.2	Gzmd	NP_034502.2	ILMN_2678281	002760520	S	188	GTCTGTGGATATTAAGGGGAACAGGATATACTGTGGAGGCTTCCTGATTC				14qC3	Mus musculus granzyme D (Gzmd), mRNA.		The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Ctla-5; CCP5; Ctla5	Ctla-5; CCP5; Ctla5
Mus musculus	Riken	ILMN_204642	ILMN_204642	FBN2	ri|E130302C12|PX00092P24|AK053721|3084					AK053721	Fbn2		ILMN_2566538	007050491	S	2967	GCCTACGCCTTACACGCCCATGTAACAACCTGAAACAGTCTTTCCAAAGG						Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins [goid 1527] [evidence TAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184286	ILMN_184286	9430087C24RIK	scl33176.1.22_17						9430087C24Rik		ILMN_1225545	006100176	S	1	CAGGGATGGATGCGCGTATCACTTGTAGGCGAGAGTCCTTTGCTGAGAGC										
Mus musculus	RefSeq	ILMN_220645	ILMN_220645	PPP5C	NM_011155.1	NM_011155.1		19060	33859593	NM_011155.1	Ppp5c	NP_035285.1	ILMN_2833772	006620750	S	1924	GGTGGGGCAAGGCTGGGGCCCACCCCCCAGCTATTTTATGTTCTGTAATT	7	-	17590041-17590090	7qA2	Mus musculus protein phosphatase 5, catalytic subunit (Ppp5c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IMP]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PP5; AU020526	PP5; AU020526
Mus musculus	RefSeq	ILMN_220645	ILMN_220645	PPP5C	NM_011155.1	NM_011155.1		19060	33859593	NM_011155.1	Ppp5c	NP_035285.1	ILMN_2724795	001440470	S	1347	AGCCGAGGGCTACGAGGTGGCCCATGGTGGCCGCTGTGTCACTGTCTTTT	7	-	17591424-17591473	7qA2	Mus musculus protein phosphatase 5, catalytic subunit (Ppp5c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IMP]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PP5; AU020526	PP5; AU020526
Mus musculus	RefSeq	ILMN_242493	ILMN_242493	D630044L22RIK	NM_175505.2	NM_175505.2		240054	31342044	NM_175505.2	D630044L22Rik	NP_780714.1	ILMN_2968887	001050386	S	2518	ACTTCACAACATGCCCACAACTGGACCAGCAGCCTCCATCCTCCCCTGAG	17	+	25690764-25690813	17qA3.3	Mus musculus RIKEN cDNA D630044L22 gene (D630044L22Rik), mRNA.				A930017K11Rik	A930017K11Rik
Mus musculus	Riken	ILMN_203371	ILMN_203371	M6A-PENDING	ri|9430081B02|PX00110E23|AK035061|2154					AK035061	M6a-pending		ILMN_1216592	000460709	S	2015	GGCCTGCCAATGCTTATTTAGAGGTCTCAAAAGGGGAGGGGGGCTGGTAG										
Mus musculus	Riken	ILMN_202588	ILMN_202588	A930014B11RIK	ri|A930014B11|PX00066A11|AK020853|1180					AK020853	A930014B11Rik		ILMN_2550745	002850500	S	767	CCCACCCAGCTGCTCATGGAGAACGAATTGTGAGACCCCTTGTTCTGACG										
Mus musculus	Riken	ILMN_203032	ILMN_203032	6030447G11RIK	ri|6030447G11|PX00057O19|AK031527|3758					AK031527	6030447G11Rik		ILMN_2554207	003800138	S	3174	CAGGCAGCTGAAACCATAGAACTTGATGCACTTGAGAGAGCAGCCACACA										
Mus musculus	RefSeq	ILMN_222059	ILMN_222059	SCYL1BP1	NM_178883.5	NM_178883.5		98376	146198544	NM_178883.5	Scyl1bp1	NP_849214.2	ILMN_2743991	004010564	S	2080	CTGTTCCCAAAAACTTGACTGGTGCATTGTGCTAGATTTGAATGTGTATA				1qH2.1	Mus musculus SCY1-like 1 binding protein 1 (Scyl1bp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI467484; NTKL-BP1	AI467484; NTKL-BP1
Mus musculus	RefSeq	ILMN_196253	ILMN_242596	CALN1	NM_021371.1	NM_021371.1		140904	10946703	NM_021371.1	Caln1	NP_067346.1	ILMN_1249022	002760021	S	1982	GGTTTCCATGGCTCTTGGCTTTCTGTTTCTGAAGTCCATCCCGCACCAGC	5	+	131315937-131315986	5qG1.3-qG2	Mus musculus calneuron 1 (Caln1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISA]	MNCb-0849; Cabp8; 9630012C17Rik	MNCb-0849; Cabp8; 9630012C17Rik
Mus musculus	RefSeq	ILMN_189254	ILMN_233092	1810064F22RIK	NM_001033151.2	NM_001033151.2		69862	142369702	NM_001033151.2	1810064F22Rik	NP_001028323.1	ILMN_1257583	002230646	S	400	TGTAATCAATTACCCCATGGAGGTTTACCTGAGTGTGATGGAAAGACTCC	9	-	22013082-22013131	9qA3	Mus musculus RIKEN cDNA 1810064F22 gene (1810064F22Rik), mRNA.					
Mus musculus	MEEBO	ILMN_188320	ILMN_188320	ZFP50	scl42329.4_2	XM_127016.2			38050431	XM_127016.2	Zfp50		ILMN_2451662	004730670	S	12	ACCCACGTGTCCAGATCTCTCCCGTTCGGTGTCCCTGCTTCCATTTTGGA										
Mus musculus	RefSeq	ILMN_199954	ILMN_199954	LOC384106	XM_357431.1	XM_357431.1			38079181	XM_357431.1	LOC384106		ILMN_2537075	002000286	S	157	GTGGGCACCAAGAAGAACCCTAGAGCCCAGTCTGATACCCTACCATGCCT										
Mus musculus	RefSeq	ILMN_225208	ILMN_225208	TAC2	NM_009312.1	NM_009312.1		21334	6678208	NM_009312.1	Tac2	NP_033338.1	ILMN_2790810	006380474	S	633	GCACTCTACACCTGGACCCCGGATTGCATCATAAAACGTGCCTGCTCCTG	10	+	127166605-127166605:127168605-127168653	10qD3	Mus musculus tachykinin 2 (Tac2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor [goid 7217] [evidence IEA]			
Mus musculus	Riken	ILMN_205650	ILMN_205650	TACTILE-PENDING	ri|A430087I06|PX00138G12|AK040329|2554					AK040329	Tactile-pending		ILMN_1247985	004040427	S	2468	CTCACAAGCAGGCTCCATTCCAGGATGAGTCAAAGCCAGTATCCGCTGTG										
Mus musculus	RefSeq	ILMN_197671	ILMN_316301	LOC100048303	XM_001480037.1	XM_001480037.1		100048303	149251918	XM_001480037.1	LOC100048303	XP_001480087.1	ILMN_1259217	005870626	S	463	AGGACAGCGCCTCTCAGCATAGGAAGCAGCAATCATCCGCACCTGTTGCC					PREDICTED: Mus musculus hypothetical protein LOC100048303 (LOC100048303), mRNA.					
Mus musculus	MEEBO	ILMN_194564	ILMN_194564	GDAP6	scl24135.1.1_194						Gdap6		ILMN_2507554	004830228	S	7	CCACCCAGCATGAACCATGGATTAGGATTAGCTAGTTGAACAACTAATGT										
Mus musculus	RefSeq	ILMN_210512	ILMN_210512	4931409K22RIK	NM_177676.4	NM_177676.4		231045	153791498	NM_177676.4	4931409K22Rik	NP_808344.2	ILMN_1259598	001240647	S	2032	CACCTAGTCATATTCTACAGTCTATCCAGTCAGTGTTGACAGAACGCCGG				5qA3	Mus musculus RIKEN cDNA 4931409K22 gene (4931409K22Rik), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198605	ILMN_198605	LOC236864	XM_135925.3	XM_135925.3			38086406	XM_135925.3	LOC236864		ILMN_1219742	004610189	S	1023	TCCAGCAGCATCCCTTCTTGTTTAAACCTTCCACTGTTAGAGGTTACATG										
Mus musculus	RefSeq	ILMN_226369	ILMN_226369	5730409E04RIK	NM_001013755.1	NM_001013755.1		230757	85701449	NM_001013755.1	5730409E04Rik	NP_001013777.1	ILMN_2836359	005820669	S	1599	CCTACCACTGAGCTGCACACCTAGCCCCGGTTCAGAGATTTATTGGCTGC	4	+	126115436-126115485	4qD2.2	Mus musculus RIKEN cDNA 5730409E04Rik gene (5730409E04Rik), mRNA.				7530403E16Rik; AI849033	7530403E16Rik; AI849033
Mus musculus	RefSeq	ILMN_223796	ILMN_245893	OLFR67	NM_013619.3	NM_013619.3		18368	120407030	NM_013619.3	Olfr67	NP_038647.2	ILMN_1228892	002120468	S	1093	GATCCAAGATCGAGTGGTTTTCCTTTTCTCCTCAGTGAGTACATGTTAAC	7	-	110935825-110935826:110935827-110935874	7qE3	Mus musculus olfactory receptor 67 (Olfr67), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	3'beta1; 3'[b]1; MOR31-1	3'beta1; 3'[b]1; MOR31-1
Mus musculus	RefSeq	ILMN_185887	ILMN_247831	RIMS2	NM_053271.1	NM_053271.1		116838	16716606	NM_053271.1	Rims2	NP_444501.1	ILMN_2740869	002060475	S	4676	ACGCACAGGTGGAAGCCCCTGGTAACACTGCATGCTTGATGTTGTGTCTA	15	+	39513362-39513411	15qB3.1	Mus musculus regulating synaptic membrane exocytosis 2 (Rims2), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IDA]; A series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response [goid 19933] [evidence IDA]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IDA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Syt3-rs; AW048769; Rab3ip2; Rim2(+40A); RIM2; Serg2; 2810036I15Rik; mKIAA0751; Rim2(+4A); Rim2(+44A)	Syt3-rs; AW048769; Rab3ip2; Rim2(+40A); RIM2; Serg2; 2810036I15Rik; mKIAA0751; Rim2(+4A); Rim2(+44A)
Mus musculus	Riken	ILMN_206623	ILMN_206623	SEMA3C	ri|7030412F17|PX00312E16|AK078589|1554					AK078589	Sema3c		ILMN_1238568	004180019	S	1166	CCCTGTCATTGCATGTGCTTAGTTGCTTTGATGAGGGCACTCTTAGGCCT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]	Interacting selectively with semaphorin receptors [goid 30215] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218740	ILMN_218740	LSR	NM_017405.1	NM_017405.1		54135	30794489	NM_017405.1	Lsr	NP_059101.1	ILMN_2716185	006960092	S	1831	CACGTTTTGTTATGTAGCTTTTATACTTTTTTAATTGGAATATTGATGAA	7	-	31742820-31742869	7qB1	Mus musculus lipolysis stimulated lipoprotein receptor (Lsr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with low-density lipoprotein, one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 30169] [evidence TAS]; Combining with a lipoprotein to initiate a change in cell activity. A lipoprotein is any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids; the lipid may be triacylglycerol, cholesterol, or phospholipid, or a combination of these [goid 30228] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Lisch7	Lisch7
Mus musculus	RefSeq	ILMN_218740	ILMN_218740	LSR	NM_017405.1	NM_017405.1		54135	30794489	NM_017405.1	Lsr	NP_059101.1	ILMN_2699637	007040544	S	521	GTGGAGTGTATTACTGCTCCGTGGTCTCAGCCCAAGATCTGGATGGGAAC	7	-	31751007-31751056	7qB1	Mus musculus lipolysis stimulated lipoprotein receptor (Lsr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with low-density lipoprotein, one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 30169] [evidence TAS]; Combining with a lipoprotein to initiate a change in cell activity. A lipoprotein is any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids; the lipid may be triacylglycerol, cholesterol, or phospholipid, or a combination of these [goid 30228] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Lisch7	Lisch7
Mus musculus	RefSeq	ILMN_199291	ILMN_199291	LOC236371	XM_135639.2	XM_135639.2			38093933	XM_135639.2	LOC236371		ILMN_1242689	005490546	S	68	CTGACCATGAGCTTCAGGAGTGGTACATGGGCTTCCTCAATGACTGTCCC										
Mus musculus	MEEBO	ILMN_191782	ILMN_191782	HCN3	scl21951.9.42_4				6680190	NM_008227	Hcn3		ILMN_1221517	004590390	S	1401	TCGTCACCGCAGTGCTCACCAAGCTCCGTTTTGAGGTCTTCCAACCAGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191782	ILMN_191782	HCN3	scl21951.9.42_4				6680190	NM_008227	Hcn3		ILMN_2482138	003390327	S	10	GTAGCATGGGGCCAGGACCACACAACTCTTTGGGTGGGAGAGTCTGGGAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187633	ILMN_187633	TNFRSF9	scl021942.7_28	NM_011612.1			6755830	NM_011612.1	Tnfrsf9		ILMN_2523516	007330338	S	12	GACTTTGATTCTTGCCGGTACGTGGTGGTGGGTGCCTTAGCTCTTTCTCG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192763	ILMN_239535	XPOT	NM_001081056.1	NM_001081056.1		73192	124486685	NM_001081056.1	Xpot	NP_001074525.1	ILMN_2503361	001230411	S	5697	CCAGTGGAGTTTCCGTCTCTGTGCTTGCTAATAGTTTCACAAGTGGCTTG	10	-	121024678-121024727	10qD2	Mus musculus exportin, tRNA (nuclear export receptor for tRNAs) (Xpot), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1110004L07Rik; AI452076; 3110065H13Rik; C79645; EXPORTIN-T	1110004L07Rik; AI452076; 3110065H13Rik; C79645; EXPORTIN-T
Mus musculus	Riken	ILMN_206201	ILMN_206201	PDGFC	ri|C130008P20|PX00167F12|AK081347|2502					AK081347	Pdgfc		ILMN_1248695	005340626	S	2446	CTGTAGAGATGGAGGTGGGAACTCATGACACTGGCTCTACTGATGCTCTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity [goid 7171] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]	Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	Riken	ILMN_203579	ILMN_203579	A230079E18RIK	ri|A230079E18|PX00129N17|AK038962|1668					AK038962	A230079E18Rik		ILMN_1231713	004040577	S	1498	AGAGACAGGAAGTAACAAAGACCAAGTAACAGTTGCCCCCTTTCCCCTGG										
Mus musculus	RefSeq	ILMN_221142	ILMN_221142	PPARA	NM_011144.2	NM_011144.2		19013	31543499	NM_011144.2	Ppara	NP_035274.2	ILMN_2927172	006860626	S	2874	GGAGCTGGTCGCCTTGGAGAACAAGAGACGAGGGTGTGATTTCATCCAGC	15	+	85630046-85630095	15qE2	Mus musculus peroxisome proliferator activated receptor alpha (Ppara), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence IMP]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence TAS]	PPAR-alpha; PPARalpha; Nr1c1; Ppar	PPAR-alpha; PPARalpha; Nr1c1; Ppar
Mus musculus	Riken	ILMN_207202	ILMN_207202	C030007B13RIK	ri|C030007B13|PX00665N15|AK081213|3279					AK081213	C030007B13Rik		ILMN_1241885	005130379	S	3133	GAGCTAGAAACTGTGAACCTGCGGAACATCAGAGAGAATGTCTGCACGCC										
Mus musculus	RefSeq	ILMN_242848	ILMN_242848	MID1	NM_183151.1	NM_183151.1		17318	127138777	NM_183151.1	Mid1	NP_898974.1	ILMN_3159435	002850403	A	3612	AGGCACAGTTTTTTCACACGTTGCACTTGTTCTTCTGTGGCCTGACCCCC	X	+	166428368-166428417	XqF5	Mus musculus midline 1 (Mid1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IGI]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC60591; DXHXS1141; 61B3-R; Fxy; Trim18	MGC60591; DXHXS1141; 61B3-R; Fxy; Trim18
Mus musculus	RefSeq	ILMN_242848	ILMN_242848	MID1	NM_183151.1	NM_183151.1		17318	127138777	NM_183151.1	Mid1	NP_898974.1	ILMN_3080065	000520113	I	54	GAAAGGTTGAGAAACTTGACATTGTCTTGGGTAGAGAGCGTCTAGAAGCA	X	+	166317607-166317656	XqF5	Mus musculus midline 1 (Mid1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IGI]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC60591; DXHXS1141; 61B3-R; Fxy; Trim18	MGC60591; DXHXS1141; 61B3-R; Fxy; Trim18
Mus musculus	RefSeq	ILMN_218071	ILMN_218071	UIMC1	NM_011307.2	NM_011307.2		20184	142363034	NM_011307.2	Uimc1	NP_035437.1	ILMN_2749336	000360400	S	2409	CCCATTCAGTATCCTGGCTTTATATTTTATAAGATCAGTTCAGACAACTG	13	-	55129713-55129762	13qB1	Mus musculus ubiquitin interaction motif containing 1 (Uimc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Rxrip110; RIP110; 9430016E08Rik; D630032M02Rik; D330018D10Rik	Rxrip110; RIP110; 9430016E08Rik; D630032M02Rik; D330018D10Rik
Mus musculus	RefSeq	ILMN_218071	ILMN_218071	UIMC1	NM_011307.2	NM_011307.2		20184	142363034	NM_011307.2	Uimc1	NP_035437.1	ILMN_1221904	003870619	S	200	GAAGAAGCGTAGACTTGAGGACTTACTCATAGTGATATCCGATAGCGATG	13	-	55194492-55194541	13qB1	Mus musculus ubiquitin interaction motif containing 1 (Uimc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Rxrip110; RIP110; 9430016E08Rik; D630032M02Rik; D330018D10Rik	Rxrip110; RIP110; 9430016E08Rik; D630032M02Rik; D330018D10Rik
Mus musculus	RefSeq	ILMN_221651	ILMN_228822	IL4RA	NM_001008700.3	NM_001008700.3		16190	111186475	NM_001008700.3	Il4ra	NP_001008700.1	ILMN_2738433	000130093	S	3200	CTCCGCTCAGTTGTAGAAAGCAACAAGGACACAAACTTGATTGCCCAAAG	7	+	132721094-132721143	7qF3	Mus musculus interleukin 4 receptor, alpha (Il4ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 1 cell differentiation [goid 45626] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation [goid 45630] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4896] [evidence IEA]	MGC118473; Il4r; CD124	MGC118473; Il4r; CD124
Mus musculus	RefSeq	ILMN_211997	ILMN_211997	SMTN	NM_013870.2	NM_013870.2		29856	142348130	NM_013870.2	Smtn	NP_038898.1	ILMN_2621581	005360626	S	2161	ATGGCTCTACTGTCGGCACAGTTACCAAAACCGAGCGCCTCGTTCACTCC	11	-	3425045-3425094	11qA1	Mus musculus smoothelin (Smtn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	smsmo	smsmo
Mus musculus	RefSeq	ILMN_211997	ILMN_211997	SMTN	NM_013870.2	NM_013870.2		29856	142348130	NM_013870.2	Smtn	NP_038898.1	ILMN_2695181	000620202	S	3063	TATGTGCAATCGCTGTACAACCACCTGCGGCGCCATGAGCTGCGTTTGCG	11	-	3417695-3417744	11qA1	Mus musculus smoothelin (Smtn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	smsmo	smsmo
Mus musculus	RefSeq	ILMN_211240	ILMN_211240	ALOX12	NM_007440.2	NM_007440.2		11684	31542126	NM_007440.2	Alox12	NP_031466.2	ILMN_2827535	005820343	S	2496	GCCTACAGAGTGAGCTCCACGACAGTCAGGGATGAAGCCCTGTCTCAACA	11	-	70058095-70058144	11qB3	Mus musculus arachidonate 12-lipoxygenase (Alox12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,14Z)-(12S)-12-hydroperoxyicosa-5,8,10,14-tetraenoate [goid 4052] [evidence IEA]	9930022G08Rik; Alox12p; P-12LO	9930022G08Rik; Alox12p; P-12LO
Mus musculus	RefSeq	ILMN_206391	ILMN_241940	WHSC1	XM_993450.1	XM_993450.1		107823	94376154	XM_993450.1	Whsc1	XP_998544.1	ILMN_1220091	006250537	S	2828	AACTCAAGAAGCAGAGCTTGTGCTATGCACGGGGTGTCTGAGCGGTGCCC				5qB2	PREDICTED: Mus musculus Wolf-Hirschhorn syndrome candidate 1 (human), transcript variant 8 (Whsc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]		
Mus musculus	RefSeq	ILMN_257279	ILMN_257279	GM1961	NM_198961.1	NM_198961.1		381838	50080206	NM_198961.1	Gm1961	NP_945199.1	ILMN_3151335	004860689	A	1374	GCAGGAAGACTATGACATTTTTCATTTTGAGAATCTCTCACAACACCTTG	7	-	8193056-8193105	7qA1	Mus musculus gene model 1961, (NCBI) (Gm1961), mRNA.				EC2-V2R	EC2-V2R
Mus musculus	RefSeq	ILMN_257279	ILMN_257279	GM1961	NM_198961.1	NM_198961.1		381838	50080206	NM_198961.1	Gm1961	NP_945199.1	ILMN_3072514	000010332	I	1194	TGCTGTGTATGTCGTAGCCCATGCACTCCATGAGATGAATTTGCAGCAGG	7	-	8194586-8194635	7qA1	Mus musculus gene model 1961, (NCBI) (Gm1961), mRNA.				EC2-V2R	EC2-V2R
Mus musculus	Riken	ILMN_202520	ILMN_202520	GTPBP2	ri|2210015F02|ZX00081H17|AK008731|590					AK008731	Gtpbp2		ILMN_2550240	000580088	S	374	AACCCAGTCGGGAGCTAGTGGGCTCGCCTTTAAGTCCCATCACTCTGGAG								Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]		
Mus musculus	RefSeq	ILMN_220100	ILMN_220100	CLN3	NM_009907.2	NM_009907.2		12752	31560608	NM_009907.2	Cln3	NP_034037.2	ILMN_1214952	005260386	S	1596	GATGTTTCCCACTCCTGAGCTGGCCTCAGAGTTTTCTCCTACCCTCTGCC	7	-	133715627-133715676	7qF3	Mus musculus ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) (Cln3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; Any constituent part of cytoplasmic vesicle, a vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 44433] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The major inducible pathway for the general turnover of cytoplasmic constituents in eukaryotic cells, it is also responsible for the degradation of active cytoplasmic enzymes and organelles during nutrient starvation. Macroautophagy involves the formation of double-membrane-bounded autophagosomes which enclose the cytoplasmic constituent targeted for degradation in a membrane-bounded structure, which then fuse with the lysosome (or vacuole) releasing a single-membrane-bounded autophagic bodies which are then degraded within the lysosome (or vacuole). Though once thought to be a purely non-selective process, it appears that some types of macroautophagy, e.g. macropexophagy, macromitophagy, may involve selective targeting of the targets to be degraded [goid 16236] [evidence IMP]; The fusion of an autophagic vacuole with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole [goid 46] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45861] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IMP]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IMP]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IMP]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor, followed by the movement of ions through a channel in the receptor complex [goid 35235] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within the cytosol of a cell or between the cytosol and its surroundings [goid 51480] [evidence IDA]; Any process that stops or reduces the activity of an enzyme [goid 43086] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IPI]	AI323623	AI323623
Mus musculus	RefSeq	ILMN_199779	ILMN_199779	LOC383005	XM_356794.1	XM_356794.1			38077220	XM_356794.1	LOC383005		ILMN_1232210	001740619	S	53	ACACTGGGCAGGTGGAAAGTTCAGGCGCAAGGAACCCCAACCCGATCCCC										
Mus musculus	RefSeq	ILMN_198027	ILMN_198027	LOC231594	XM_144495.2	XM_144495.2			38080490	XM_144495.2	LOC231594		ILMN_1233270	002900762	S	701	TGCCTGATGGCAGCAAAGTTGAAATAGGCCCTTCCAGGTTCCGGGTCCCC										
Mus musculus	RefSeq	ILMN_224675	ILMN_224675	LHX4	NM_010712.1	NM_010712.1		16872	7110668	NM_010712.1	Lhx4	NP_034842.1	ILMN_2960766	007510164	S	1443	GGTGCATCTCACACTTGGTCTCCCAAATCATCCCTCTCACCAGAACCAGG	1	-	157548967-157549016	1qG3	Mus musculus LIM homeobox protein 4 (Lhx4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of medial motor column neurons. Medial motor column neurons are generated at all rostrocaudal levels and send axons to the axial muscles (medial group) and to the body wall muscles (lateral group). Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21526] [evidence IGI]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IGI]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Gsh4; Gsh-4	Gsh4; Gsh-4
Mus musculus	RefSeq	ILMN_218145	ILMN_218145	GPR150	NM_175495.2	NM_175495.2		238725	31342021	NM_175495.2	Gpr150	NP_780704.1	ILMN_2985788	001230035	S	1920	CCGAGAGGAAAATCCCCATAATGCTCTTCCTGGGGAGATCTGGAGTGCTG	13	-	76192475-76192524	13qC1	Mus musculus G protein-coupled receptor 150 (Gpr150), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	PGR11; C030001A19Rik	PGR11; C030001A19Rik
Mus musculus	RefSeq	ILMN_212242	ILMN_261781	ADAMTS7	NM_001003911.2	NM_001003911.2		108153	133778948	NM_001003911.2	Adamts7	NP_001003911.2	ILMN_2624328	006290709	S	5097	GCGGGTAGCCAGACGGTAAACCGAGGAAGGCACCATTAGAATGCACAGAC	9	+	90094691-90094709:90094710-90094740	9qE3.1	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7 (Adamts7), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IDA]	ADAM-TS7; ADAMTS7B	ADAM-TS7; ADAMTS7B
Mus musculus	RefSeq	ILMN_211494	ILMN_211494	2310005E10RIK	NM_172398.3	NM_172398.3		67861	71067101	NM_172398.3	2310005E10Rik	NP_765986.3	ILMN_2733753	002120243	S	1063	CGCTTGCCTGGAGGACACTCTTCACTGATATGCAACCCGCTCCTACTGAC	6	+	34346671-34346720	6qB1	Mus musculus RIKEN cDNA 2310005E10 gene (2310005E10Rik), mRNA.				Akr1b10	Akr1b10
Mus musculus	RefSeq	ILMN_211494	ILMN_211494	2310005E10RIK	NM_172398.3	NM_172398.3		67861	71067101	NM_172398.3	2310005E10Rik	NP_765986.3	ILMN_2616422	006400377	S	69	TCCCTTTGAACCGTTTCTGCAGCAACCATGGCCGCCTTCGTGACGCTCCT	6	+	34334315-34334341:34334342-34334364	6qB1	Mus musculus RIKEN cDNA 2310005E10 gene (2310005E10Rik), mRNA.				Akr1b10	Akr1b10
Mus musculus	MEEBO	ILMN_216142	ILMN_216142	MOSPD1	scl070380.6_0	XM_135859.1			20983795	XM_135859.1	Mospd1		ILMN_2667784	006380736	S	51	TGACAAAGGAGCAGGGAGCAGTCGCAGCTGCTTTCCGAGGAGCCAGTGTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218252	ILMN_218252	ABCF1	NM_013854.1	NM_013854.1		224742	39930334	NM_013854.1	Abcf1	NP_038882.1	ILMN_2693594	002340246	S	1816	AGCGTCCCAAGGAGTACACCGTGCGCTTCACCTTCCCAGACCCCCCGCCT	17	-	36096408-36096457	17qB1	Mus musculus ATP-binding cassette, sub-family F (GCN20), member 1 (Abcf1), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	AU041969; D17Wsu166e; Abc50; GCN20	AU041969; D17Wsu166e; Abc50; GCN20
Mus musculus	RefSeq	ILMN_218252	ILMN_218252	ABCF1	NM_013854.1	NM_013854.1		224742	39930334	NM_013854.1	Abcf1	NP_038882.1	ILMN_2768926	007150035	S	2853	AGAGGTGACCTTTGCTGTGCTGGGTTCCCCTCAGGCCTAGTTAAGGTGGC	17	-	36094011-36094060	17qB1	Mus musculus ATP-binding cassette, sub-family F (GCN20), member 1 (Abcf1), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	AU041969; D17Wsu166e; Abc50; GCN20	AU041969; D17Wsu166e; Abc50; GCN20
Mus musculus	RefSeq	ILMN_218252	ILMN_218252	ABCF1	NM_013854.1	NM_013854.1		224742	39930334	NM_013854.1	Abcf1	NP_038882.1	ILMN_2760415	002360431	S	1813	TGAAGCGTCCCAAGGAGTACACCGTGCGCTTCACCTTCCCAGACCCCCCG	17	-	36096411-36096460	17qB1	Mus musculus ATP-binding cassette, sub-family F (GCN20), member 1 (Abcf1), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	AU041969; D17Wsu166e; Abc50; GCN20	AU041969; D17Wsu166e; Abc50; GCN20
Mus musculus	Riken	ILMN_203812	ILMN_203812	6720460B08RIK	ri|6720460B08|PX00059D06|AK032831|2680					AK032831	6720460B08Rik		ILMN_1227881	005870328	S	2181	CTAATGGCGGATGACATGCAGAGGGACCTACAGTGGGCAAGTGAGCTTCC										
Mus musculus	Riken	ILMN_206124	ILMN_206124	C630015D03RIK	ri|C630015D03|PX00084E02|AK083116|3328					AK083116	C630015D03Rik		ILMN_1247130	003990554	S	2929	CCTCTAGCCAGATTGAGCAAATGTAGACACTGACAGCTGCAGGCTCGCAT										
Mus musculus	RefSeq	ILMN_219744	ILMN_219744	RNF182	NM_183204.2	NM_183204.2		328234	142345088	NM_183204.2	Rnf182	NP_899027.1	ILMN_1223559	003120170	S	513	ACCTGTCTGCCGGATGACGAAGTCAGCAGCCTGCCCGATGACAACAACAT	13	+	43763554-43763603	13qA4	Mus musculus ring finger protein 182 (Rnf182), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC107143; C630023L15Rik	MGC107143; C630023L15Rik
Mus musculus	Riken	ILMN_202171	ILMN_202171	CASP3	ri|3110059O17|ZX00072B22|AK014231|1174					AK014231	Casp3		ILMN_1236424	007050044	S	720	ATTTATGGGTGTGGTCCCCGATTGGTTGGCTGTGTTGCAGTGGATGGGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IGI]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IGI]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA];  [goid 8625] [evidence IMP]; The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of activated T cell proliferation [goid 46007] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IGI]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IMP]		
Mus musculus	MEEBO	ILMN_195410	ILMN_195410	MTDNA_COXII	mtDNA_COXII						mtDNA_COXII		ILMN_1248039	000050743	S	1	CCCCGTATTAACCGTTAAAACCATAGGGCACCAATGATACTGAAGCTACG										
Mus musculus	RefSeq	ILMN_209657	ILMN_209657	PRDM1	NM_007548.2	NM_007548.2		12142	118131136	NM_007548.2	Prdm1	NP_031574.1	ILMN_2744650	002970170	S	4926	AGCATGACCTGACATTGACACCAAATACAAATACGATTTCTTTGCAGTGA	10	-	44157288-44157337	10qB2	Mus musculus PR domain containing 1, with ZNF domain (Prdm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; Maternally driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1893] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Blimp1; Blimp-1; PRDI-BF1; ZNFPR1A1	Blimp1; Blimp-1; PRDI-BF1; ZNFPR1A1
Mus musculus	RefSeq	ILMN_209657	ILMN_209657	PRDM1	NM_007548.2	NM_007548.2		12142	118131136	NM_007548.2	Prdm1	NP_031574.1	ILMN_2597923	004760180	S	628	GGAGTACATACCGAAGGGAACACGCTTTGGACCCCTCATCGGTGAAGTCT	10	-	44169974-44170023	10qB2	Mus musculus PR domain containing 1, with ZNF domain (Prdm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; Maternally driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1893] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Blimp1; Blimp-1; PRDI-BF1; ZNFPR1A1	Blimp1; Blimp-1; PRDI-BF1; ZNFPR1A1
Mus musculus	RefSeq	ILMN_201359	ILMN_201359	LOC382541	XM_356555.1	XM_356555.1			38091682	XM_356555.1	LOC382541		ILMN_2542019	007210307	S	153	CCCCTTGAAAATGGACCCCACAGGAAAACTGAACCTCACTTTGGAAGGCG										
Mus musculus	RefSeq	ILMN_211796	ILMN_211796	CFDP1	NM_011801.1	NM_011801.1		23837	6753411	NM_011801.1	Cfdp1	NP_035931.1	ILMN_2619634	005290544	S	836	AGAGCTTCAAGGAAGAAGAGGGGATTGGTGAAGAACTGGCCATCCATAAC	8	-	114364071-114364109:114364258-114364268	8qE1	Mus musculus craniofacial development protein 1 (Cfdp1), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence TAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]		Bucentaur; cp27; Bcnt; AA408409; Cfdp	Bucentaur; cp27; Bcnt; AA408409; Cfdp
Mus musculus	RefSeq	ILMN_211883	ILMN_240560	KDELR3	NM_134090.1	NM_134090.1		105785	19527315	NM_134090.1	Kdelr3	NP_598851.1	ILMN_2675697	005550201	S	1131	GGACTGCTTAGCTCACTTGTTAGCTGAGATGGACACCATGGCCACTGTGT	15	+	79357946-79357995	15qE1	Mus musculus KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 (Kdelr3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The retention in the endoplasmic reticulum (ER) lumen of soluble resident proteins. Sorting receptors retrieve proteins with ER localization signals, such as KDEL and HDEL sequences or some transmembrane domains, that have escaped to the cis-Golgi network and return them to the ER. Abnormally folded proteins and unassembled subunits are also selectively retained in the ER [goid 6621] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an endoplasmic reticulum (ER) retention sequence, a specific peptide sequence that ensures a protein is retained within the ER [goid 46923] [evidence IEA]	AI173274	AI173274
Mus musculus	RefSeq	ILMN_217028	ILMN_217028	GZMD	NM_010372.1	NM_010372.1		14941	6754105	NM_010372.1	Gzmd	NP_034502.1	ILMN_2987649	003390280	S	668	ACGGAACAATCTCTTCAGGAATCTTCACTAAGGTTGTGCACTTCCTGCCG	14	-	56748541-56748590	14qC3	Mus musculus granzyme D (Gzmd), mRNA.		The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Ctla-5; CCP5; Ctla5	Ctla-5; CCP5; Ctla5
Mus musculus	RefSeq	ILMN_199328	ILMN_311597	LOC236294	XR_030518.1	XR_030518.1		236294	149263828	XR_030518.1	LOC236294		ILMN_1232954	006650521	S	1275	GGCCATGAGCCACATGAACGGGCACAAGCACGGGAAGTCAGTGCGCATCA				13qA1	PREDICTED: Mus musculus similar to Polypyrimidine tract binding protein 1 (LOC236294), misc RNA.					
Mus musculus	RefSeq	ILMN_200363	ILMN_200363	LOC386324	XM_359170.1	XM_359170.1			38081430	XM_359170.1	LOC386324		ILMN_2538499	003360594	S	672	AGATCAGTGGAGGTTTCTGGGAGAAAGGAACTTATACCCGCCACTAGATG										
Mus musculus	MEEBO	ILMN_192644	ILMN_192644	A830083F22	scl26332.11.1_0						A830083F22		ILMN_2490014	004860300	S	20	CTGGGAAGGAGAGGATCTGGGAGGATGGAGTCTAGATCACAAGGGAACAT										
Mus musculus	RefSeq	ILMN_197491	ILMN_197491	LOC229206	XM_124029.2	XM_124029.2			38076246	XM_124029.2	LOC229206		ILMN_1218313	001570386	S	506	GCCCCACACTATTGAACGTCCAGCTGGATGGATTAGAGTATGTTCTGCAG										
Mus musculus	RefSeq	ILMN_204055	ILMN_330092	ENSMUSG00000071316	XM_001479333.1	XM_001479333.1		100038740	149266134	XM_001479333.1	ENSMUSG00000071316	XP_001479383.1	ILMN_1231109	003120739	S	3087	GTTTAGAAAGCCAAGGGGCCATCACCACAGGGAGAAAGTGCCTGAAGGTG					PREDICTED: Mus musculus predicted gene, ENSMUSG00000071316 (ENSMUSG00000071316), mRNA.					
Mus musculus	RefSeq	ILMN_241594	ILMN_241594	AFF1	NM_133919.3	NM_133919.3		17355	124248526	NM_133919.3	Aff1	NP_598680.3	ILMN_3154640	004490180	A	8082	GCCTCATGGGAGACTCTGAAAGGGGGCAGACGTGATCTGTGAGAGTTTTT	5	+	104284100-104284149	5qE5	Mus musculus AF4/FMR2 family, member 1 (Aff1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	Mllt2h; 9630032B01Rik; AW319193; Rob; Af4	Mllt2h; 9630032B01Rik; AW319193; Rob; Af4
Mus musculus	RefSeq	ILMN_219443	ILMN_219443	TMEM119	NM_146162.1	NM_146162.1		231633	22122696	NM_146162.1	Tmem119	NP_666274.1	ILMN_3001322	001400253	S	1830	GAAGTAGACTAGAAGCCAACGGGTGCCTGGGGGCAACTGACGGTCTGGAT	5	-	114054932-114054981	5qF	Mus musculus transmembrane protein 119 (Tmem119), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BC025600; AW208946; MGC38046	BC025600; AW208946; MGC38046
Mus musculus	Riken	ILMN_202178	ILMN_202178	1700034M03RIK	ri|1700034M03|ZX00074G16|AK006602|1398					AK006602	1700034M03Rik		ILMN_2547612	002320326	S	79	GAGAGAAATGTTGGCAAGAACTCCAGTGTTTCCCGAGAGACCCTGAAGAG										
Mus musculus	RefSeq	ILMN_210351	ILMN_210351	HERPUD1	NM_022331.1	NM_022331.1		64209	11612514	NM_022331.1	Herpud1	NP_071726.1	ILMN_2790241	001050619	S	1777	TGCAGTGCTTTCCTTTAAACCGAGGGTGGCGACTTGGCAGAGGTAAAACC	8	+	96919164-96919213	8qC5	Mus musculus homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 (Herpud1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IDA]		Herp; SUP	Herp; SUP
Mus musculus	RefSeq	ILMN_210351	ILMN_210351	HERPUD1	NM_022331.1	NM_022331.1		64209	11612514	NM_022331.1	Herpud1	NP_071726.1	ILMN_2790246	000050129	S	1599	GTGTGCATGTGTGCTCTACATGGAAGTCATAGATGCAGAAACGGTTCTGC	8	+	96918986-96919035	8qC5	Mus musculus homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 (Herpud1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IDA]		Herp; SUP	Herp; SUP
Mus musculus	RefSeq	ILMN_199419	ILMN_199419	OLFR1431	NM_146414.1	NM_146414.1		258409	33239081	NM_146414.1	Olfr1431	NP_666526.1	ILMN_2753911	004850553	S	58	GATTTCCCTAGAATCACAGTTCTGCTTTTTGTCATATTTTTGATGATCTA	19	+	12284115-12284164	19qA	Mus musculus olfactory receptor 1431 (Olfr1431), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR214-5	MOR214-5
Mus musculus	RefSeq	ILMN_199419	ILMN_199419	OLFR1431	NM_146414.1	NM_146414.1		258409	33239081	NM_146414.1	Olfr1431	NP_666526.1	ILMN_2963115	005050048	S	836	ACACTGTGGTGATTCCCATGTTGAACCCTTTGATATATAGTCTGAGAAAC	19	+	12284893-12284942	19qA	Mus musculus olfactory receptor 1431 (Olfr1431), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR214-5	MOR214-5
Mus musculus	RefSeq	ILMN_187559	ILMN_187559	VDR	NM_009504.2	NM_009504.2		22337	31543943	NM_009504.2	Vdr	NP_033530.2	ILMN_2445165	005420347	S	2	GCGTGGGAGAAAGTAGGGGAGGAGTCCAAACCAGGCCACCAGAGATGGTT	15	-	97736279-97736328	15qF1	Mus musculus vitamin D receptor (Vdr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process by which nutrients are taken up from the contents of the intestine [goid 50892] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Nr1i1	Nr1i1
Mus musculus	RefSeq	ILMN_187559	ILMN_187559	VDR	NM_009504.2	NM_009504.2		22337	31543943	NM_009504.2	Vdr	NP_033530.2	ILMN_2864062	002360292	S	3892	GTCAGGGAGCTGGGAGGAAAAGACAGCAGGACCAAGTAGGATTCCGAAGC	15	-	97682873-97682922	15qF1	Mus musculus vitamin D receptor (Vdr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process by which nutrients are taken up from the contents of the intestine [goid 50892] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Nr1i1	Nr1i1
Mus musculus	RefSeq	ILMN_202873	ILMN_240400	A430107D22RIK	XM_919537.2	XM_919537.2		320484	94402654	XM_919537.2	A430107D22Rik	XP_924630.1	ILMN_1214877	007560634	S	1079	TGGCAGCTAGTGTGATAGGGTGGGGGAGCAGCAGGGGTGAACAAGATCTC				17qB1	PREDICTED: Mus musculus RIKEN cDNA A430107D22 gene, transcript variant 5 (A430107D22Rik), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218509	ILMN_251147	1700023E05RIK	NM_027970.1	NM_027970.1		71868	58037270	NM_027970.1	1700023E05Rik	NP_082246.1	ILMN_2696687	007560020	S	1633	CACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAG	5	+	77490461-77490510	5qC3.3	Mus musculus RIKEN cDNA 1700023E05 gene (1700023E05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_251147	ILMN_251147	1700023E05RIK	NM_027970.1	NM_027970.1		71868	58037270	NM_027970.1	1700023E05Rik	NP_082246.1	ILMN_2805934	002480201	S	1606	CCTCCCAGACATGAGACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGC	5	+	77490434-77490483	5qC3.3	Mus musculus RIKEN cDNA 1700023E05 gene (1700023E05Rik), mRNA.					
Mus musculus	Riken	ILMN_201918	ILMN_201918	4933429H19RIK	ri|4933429H19|PX00021K22|AK016981|985					AK016981	4933429H19Rik		ILMN_1244830	002490487	S	746	CCAGAAGGCTGGATGAGCCCAGGGAAGTTAAGGTGGAAAGGAGCAAGACT								Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214547	ILMN_214547	ROBO1	NM_019413.2	NM_019413.2		19876	122114643	NM_019413.2	Robo1	NP_062286.2	ILMN_1244484	002760343	S	7217	GAATCTTTAGTCATGCATAGGTATCAGGCTTGACCCCCACAAAGCCAAAC	16	+	73045994-73046043	16qC3.1	Mus musculus roundabout homolog 1 (Drosophila) (Robo1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]	Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW742721; AW494633; DUTT1	AW742721; AW494633; DUTT1
Mus musculus	RefSeq	ILMN_184831	ILMN_214547	ROBO1	NM_019413.2	NM_019413.2		19876	122114643	NM_019413.2	Robo1	NP_062286.2	ILMN_2421958	005860551	S	973	CAGGACCTACCCGAGGACAATGATCGCGGAGCCTGCTCGCTTTTACCTCT	16	+	72664366-72664384:72664385-72664415	16qC3.1	Mus musculus roundabout homolog 1 (Drosophila) (Robo1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]	Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW742721; AW494633; DUTT1	AW742721; AW494633; DUTT1
Mus musculus	Riken	ILMN_202940	ILMN_202940	A930008K05RIK	ri|A930008K05|PX00065L19|AK044352|1412					AK044352	A930008K05Rik		ILMN_1248686	006510056	S	1055	GGGACAGAAGGCCCGTTTGCCATGCTCCCAGACATAGGCTCTTGACAGGA										
Mus musculus	MEEBO	ILMN_185345	ILMN_185345	5730460C07RIK	scl21374.3.1_104						5730460C07Rik		ILMN_1249562	007040193	S	8	GGGCAGACAAGACGGGTGAGAGTTACGCAGCCCCAAGAGTAAAGGAGGCT										
Mus musculus	RefSeq	ILMN_195936	ILMN_195936	ZFP62	NM_009562.2	NM_009562.2		22720	67763829	NM_009562.2	Zfp62	NP_033588.2	ILMN_3144673	002510196	A	3249	CCAAGAAGGGCCTCCAACAGGCAAATTCAGGGAGAGGATGGTTTCAGGGA	11	+	49031640-49031689	11qB1.2	Mus musculus zinc finger protein 62 (Zfp62), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI227021	AI227021
Mus musculus	RefSeq	ILMN_195936	ILMN_195936	ZFP62	NM_009562.2	NM_009562.2		22720	67763829	NM_009562.2	Zfp62	NP_033588.2	ILMN_2520096	001340703	S	2781	TTCCAGAAGATGATCTACTATGAGGGAGGGAATTCTCTGGATGGGACCAG	11	+	49031172-49031221	11qB1.2	Mus musculus zinc finger protein 62 (Zfp62), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI227021	AI227021
Mus musculus	RefSeq	ILMN_214965	ILMN_214965	CCDC91	NM_025911.2	NM_025911.2		67015	70980527	NM_025911.2	Ccdc91	NP_080187.2	ILMN_1217225	006250133	S	1858	CCCAAAGTCATGGGAAATCTGTGTGTTATCCAGAGTGCTTCAGGTAAGCC	6	+	147580533-147580582	6qG3	Mus musculus coiled-coil domain containing 91 (Ccdc91), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	1700086G08Rik; AW555238; AU045683; 1810060J02Rik	1700086G08Rik; AW555238; AU045683; 1810060J02Rik
Mus musculus	RefSeq	ILMN_211377	ILMN_211377	DCI	NM_010023.3	NM_010023.3		13177	142379490	NM_010023.3	Dci	NP_034153.2	ILMN_2615207	005390128	S	666	GAGGATCAGGTACACAGCAAGGCTCGCTCAGTGATGACCAAGTGGTTAGC	17	+	24574498-24574547	17qA3.3	Mus musculus dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenyme A isomerase) (Dci), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IMP]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 3-cis-dodecenoyl-CoA = 2-trans-dodecenoyl-CoA [goid 4165] [evidence IDA]	eci	eci
Mus musculus	RefSeq	ILMN_198745	ILMN_198745	LOC245510	XM_141918.4	XM_141918.4			38087225	XM_141918.4	LOC245510		ILMN_2532773	000780593	S	2487	CTTTGGCACAGCAGCAGACAGATCAAGGAACTCTTCAGGCCCACAGTCTG										
Mus musculus	RefSeq	ILMN_213167	ILMN_213167	GRLF1	NM_172739.4	NM_172739.4		232906	114326533	NM_172739.4	Grlf1	NP_766327.3	ILMN_2766542	002140717	S	5953	TGACAGCAAAGCAAGGACACCTGGGCAGTAACTGCAACCACAGCCCCCTC	7	-	17082212-17082261	7qA2	Mus musculus glucocorticoid receptor DNA binding factor 1 (Grlf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	6430596G11Rik; mKIAA1722; KIAA1722; AI841135	6430596G11Rik; mKIAA1722; KIAA1722; AI841135
Mus musculus	RefSeq	ILMN_213167	ILMN_213167	GRLF1	NM_172739.4	NM_172739.4		232906	114326533	NM_172739.4	Grlf1	NP_766327.3	ILMN_2634349	005550307	S	8051	GGGGGCTCAAACCAGGACCTCTCTAGTTGCTGTTAGGAATGTCTGCTTCA	7	-	17080114-17080163	7qA2	Mus musculus glucocorticoid receptor DNA binding factor 1 (Grlf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	6430596G11Rik; mKIAA1722; KIAA1722; AI841135	6430596G11Rik; mKIAA1722; KIAA1722; AI841135
Mus musculus	RefSeq	ILMN_187202	ILMN_237294	ELP4	NM_023876.3	NM_023876.3		77766	141803399	NM_023876.3	Elp4	NP_076365.2	ILMN_2592439	005050398	S	3750	GGTAAAGATTTTGACCACTCTAGGTTAACAAGGTATATGGATCTGAGACC	2	-	105540368-105540417	2qE3	Mus musculus elongation protein 4 homolog (S. cerevisiae) (Elp4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A heterohexameric protein complex that is involved in tRNA modification, and exerts indirect effects on transcriptional elongation and exocytosis. The complex can associate physically with hyperphosphorylated RNA polymerase II; it contains two discrete heterotrimeric subcomplexes [goid 33588] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Paxneb; A330107A17Rik	Paxneb; A330107A17Rik
Mus musculus	RefSeq	ILMN_210414	ILMN_210414	SIGLECH	NM_178706.3	NM_178706.3		233274	142364787	NM_178706.3	Siglech	NP_848821.1	ILMN_2656415	007570753	S	2003	TATGTATGGCTTTGAAAGAAACCTGTTATCTCTATGCTAATTATTCAAGA	7	+	63033905-63033954	7qB5	Mus musculus sialic acid binding Ig-like lectin H (Siglech), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC106898; Siglec-H; 6430529G09Rik	MGC106898; Siglec-H; 6430529G09Rik
Mus musculus	RefSeq	ILMN_210414	ILMN_210414	SIGLECH	NM_178706.3	NM_178706.3		233274	142364787	NM_178706.3	Siglech	NP_848821.1	ILMN_1239190	000070463	S	70	TCCCGACTGCTGCCCTTGCTCTGGGTGCTTAAGTGGGCATCTGGAAACTG	7	+	63023665-63023714	7qB5	Mus musculus sialic acid binding Ig-like lectin H (Siglech), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC106898; Siglec-H; 6430529G09Rik	MGC106898; Siglec-H; 6430529G09Rik
Mus musculus	RefSeq	ILMN_232455	ILMN_232455	STK3	NM_019635.2	NM_019635.2		56274	118150663	NM_019635.2	Stk3	NP_062609.2	ILMN_2958410	005270402	S	1510	GCATGCGTGAGCCAGGCCCTATGTCCAACAGTGTTTTTCCTGACAACTGG	15	-	34874790-34874839	15qB3.1	Mus musculus serine/threonine kinase 3 (Ste20, yeast homolog) (Stk3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Mst3; 0610042I06Rik; Mst2; mess1; MST	Mst3; 0610042I06Rik; Mst2; mess1; MST
Mus musculus	RefSeq	ILMN_222193	ILMN_222193	FNBP1L	NM_153118.1	NM_153118.1		214459	23346554	NM_153118.1	Fnbp1l	NP_694758.1	ILMN_2746132	004120008	S	4387	AGGCAAGTTCCTTCATGTGGAGTAGTGCAACCTGTGTATGGGTTATAACA	3	-	122241851-122241900	3qG1	Mus musculus formin binding protein 1-like (Fnbp1l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	2610318I01Rik; AW548221; MGC30506; TOCA1	2610318I01Rik; AW548221; MGC30506; TOCA1
Mus musculus	MEEBO	ILMN_208724	ILMN_208724	TACR1	scl0001128.1_71	NM_009313.2			31543839	NM_009313.2	Tacr1		ILMN_2726850	006250736	S	4413	AGGCCTCCTCCTGCCACTGTTCTTGCTTAGAGAGGAGCTCTGAAGTCTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with tachykinin to initiate a change in cell activity [goid 4995] [evidence IEA]		
Mus musculus	RefSeq	ILMN_227177	ILMN_227177	ZKSCAN2	NM_001081329.1	NM_001081329.1		210162	124486744	NM_001081329.1	Zkscan2	NP_001074798.1	ILMN_2873274	005670450	S	2278	GGGGACATATTGAGGTTGAACCCCGAGAGCCTACAACCTGGGAACCTGTG	7	-	130628568-130628617	7qF3	Mus musculus zinc finger with KRAB and SCAN domains 2 (Zkscan2), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	9430065N20Rik; Zfp694	9430065N20Rik; Zfp694
Mus musculus	RefSeq	ILMN_222191	ILMN_222191	KRTAP16-8	NM_130856.1	NM_130856.1		68484	21536239	NM_130856.1	Krtap16-8	NP_570926.1	ILMN_2905513	000540253	S	276	GGACACCATGGAAGACTCTCACCTCCTTGAATGTGAGCTCAGAAATCTCC	16	-	88936415-88936464	16qC3.3	Mus musculus keratin associated protein 16-8 (Krtap16-8), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			1110002D05Rik	1110002D05Rik
Mus musculus	RefSeq	ILMN_213863	ILMN_213863	GNPNAT1	NM_019425.2	NM_019425.2		54342	118130756	NM_019425.2	Gnpnat1	NP_062298.1	ILMN_2641569	006650474	S	1439	GTGGTTCTAATCTTTTGCATTCCATGTTATTACATTAAACTTGTTTATAT	14	-	45997143-45997192	14qC1	Mus musculus glucosamine-phosphate N-acetyltransferase 1 (Gnpnat1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 6048] [evidence TAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + D-glucosamine 6-phosphate = CoA + N-acetyl-D-glucosamine 6-phosphate [goid 4343] [evidence IDA]	Gsnpat; AU017428; AU040593; Gpnat1; EMeg32	Gsnpat; AU017428; AU040593; Gpnat1; EMeg32
Mus musculus	RefSeq	ILMN_194817	ILMN_194817	TMEFF2	NM_019790.2	NM_019790.2		56363	31543874	NM_019790.2	Tmeff2	NP_062764.1	ILMN_2935998	000620136	S	3102	CTGTGTGTGTAATTTGTTTAACATGCACAGAGATGTAAGTGGCCCTAGTA	1	+	51131578-51131627	1qC1.1	Mus musculus transmembrane protein with EGF-like and two follistatin-like domains 2 (Tmeff2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4832418D20Rik	4832418D20Rik
Mus musculus	RefSeq	ILMN_222433	ILMN_222433	MUPCDH	NM_028069.2	NM_028069.2		72040	142361587	NM_028069.2	Mupcdh	NP_082345.1	ILMN_2749556	004200240	S	2030	CCGCTTTGGCGTGGATGCTGACAACACTTACATCTAGCTCAGCGCCCGAC	7	-	148455035-148455048:148455049-148455084	7qF5	Mus musculus mucin-like protocadherin (Mupcdh), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mucdhl; AI481143; 1810074H01Rik	Mucdhl; AI481143; 1810074H01Rik
Mus musculus	RefSeq	ILMN_195049	ILMN_229604	PQLC2	NM_145384.1	NM_145384.1		212555	21703767	NM_145384.1	Pqlc2	NP_663359.1	ILMN_2725548	001170056	S	2710	GGGGACCTAGGGTTGTCCCTCTGACTGGATACAACCTAGTAAATGGTACC				4qD3	Mus musculus PQ loop repeat containing 2 (Pqlc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC38094; BC019216; MGC29170	MGC38094; BC019216; MGC29170
Mus musculus	RefSeq	ILMN_221473	ILMN_221473	TRIM69	NM_080510.1	NM_080510.1		70928	17985998	NM_080510.1	Trim69	NP_536771.1	ILMN_1256486	003940333	S	1631	GTGCCCCTGCCTTAATGACGGTGGGGAGAATAAAGAACCGTTGCACATCG	2	+	122004636-122004685	2qE5	Mus musculus tripartite motif-containing 69 (Trim69), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Trif; Trimless; 4921519C19Rik; Rnf36	Trif; Trimless; 4921519C19Rik; Rnf36
Mus musculus	RefSeq	ILMN_199364	ILMN_199364	MPV17L	NM_033564.1	NM_033564.1		93734	15808993	NM_033564.1	Mpv17l	NP_291042.2	ILMN_2794258	000780215	S	2815	TCTGTCTTCAGATCAAGATGCAGAACTCTCGGGCTGGTGAGATGGCTCAG	16	+	13862714-13862763	16qA1	Mus musculus Mpv17 transgene, kidney disease mutant-like (Mpv17l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	M-LP	M-LP
Mus musculus	RefSeq	ILMN_209755	ILMN_209755	OAT	NM_016978.1	NM_016978.1		18242	8393865	NM_016978.1	Oat	NP_058674.1	ILMN_2933112	004560309	S	1660	CTGCGTACAGCCTGCAGATGGAGGCCTGCAGTCATTTACGTGCGTCTTTA	7	-	132396157-132396206	7qF3	Mus musculus ornithine aminotransferase (Oat), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: L-ornithine + a 2-oxo acid = L-glutamate 5-semialdehyde + an L-amino acid [goid 4587] [evidence IEA]	AI194874	AI194874
Mus musculus	RefSeq	ILMN_199958	ILMN_256984	LOC630179	XM_903289.1	XM_903289.1		630179	82895744	XM_903289.1	LOC630179	XP_908382.1	ILMN_1227937	004490561	S	1333	CCCAAGTCAGTCTGCTTTGGTACCTATTCCTGTTATGACTGCGATACACG	4	+	143923876-143923925		PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 7 (LOC630179), mRNA.					
Mus musculus	RefSeq	ILMN_197540	ILMN_197540	LOC381442	XM_358580.1	XM_358580.1			38076493	XM_358580.1	LOC381442		ILMN_2528489	004560377	S	266	ACCCGCGTGAAGGCAGGCAAAAAGAAAGGACAGGGTCTCTCACTGGACCA										
Mus musculus	Riken	ILMN_203512	ILMN_203512	KCND3	ri|9330129C02|PX00105E19|AK033962|3730					AK033962	Kcnd3		ILMN_1241406	006400241	S	3342	TTCCCATTCTTTCCTTTGACCTTCCCCGGGGGCTGAGGGGACAGTGGGAT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194557	ILMN_194557	SCL0003300.1_40	scl0003300.1_40	AK012325.1			12848992	AK012325.1	scl0003300.1_40		ILMN_1253522	003520379	S	1	CTGTCTGCAGCGCACCGAGGGACTATGCTCCGAGTTCAGCTGCTCATATC										
Mus musculus	RefSeq	ILMN_208787	ILMN_208787	PHB	NM_008831.3	NM_008831.3		18673	114431263	NM_008831.3	Phb	NP_032857.1	ILMN_2589533	006370424	S	977	TCATGATTGGCTTAAAGTGAAGGAAATAAAGGTAAAATCACTTCAGATCT	11	+	95541298-95541347	11qD	Mus musculus prohibitin (Phb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]		BAP32	BAP32
Mus musculus	RefSeq	ILMN_220345	ILMN_220345	4930522H14RIK	NM_026291.2	NM_026291.2		67646	142367097	NM_026291.2	4930522H14Rik	NP_080567.1	ILMN_2720901	002760121	S	642	GGCCTGGGAACACAGTGAGCAACACATTTTGTAGCGAGCAAAAAACTGAC	4	-	109178104-109178153	4qC7	Mus musculus RIKEN cDNA 4930522H14 gene (4930522H14Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700007J23Rik	1700007J23Rik
Mus musculus	RefSeq	ILMN_221986	ILMN_221986	BHLHB5	NM_021560.3	NM_021560.3		59058	141803428	NM_021560.3	Bhlhb5	NP_067535.2	ILMN_2743082	005560674	S	2806	GGAAGAAGCTATTTACCCAAAGCGAGCTTTCAGTTTTAGTTTGCATGGCG	3	+	17957207-17957256	3qA1	Mus musculus basic helix-loop-helix domain containing, class B5 (Bhlhb5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina [goid 60040] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form [goid 60042] [evidence IMP]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Beta3	Beta3
Mus musculus	RefSeq	ILMN_254922	ILMN_254922	MEIS2	NM_010825.2	NM_010825.2		17536	31981614	NM_010825.2	Meis2	NP_034955.1	ILMN_2850391	006350196	S	2687	CTGCTGTGGAATTGGTATTGTATGTCCATGGGGTCCTCTTTTCTCAGCAC	2	-	115688938-115688987	2qE4-qE5	Mus musculus Meis homeobox 2 (Meis2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	A430109D20Rik; Stra10; Meis2	A430109D20Rik; Stra10; Meis2
Mus musculus	RefSeq	ILMN_214090	ILMN_214090	CDR2	NM_007672.1	NM_007672.1		12585	6671729	NM_007672.1	Cdr2	NP_031698.1	ILMN_1255513	003420037	S	2249	GCAGCGATTCCTGTCGACTCCCTTACACAGTATTGATCTTCTGACTGTGG	7	-	128100670-128100719	7qF2	Mus musculus cerebellar degeneration-related 2 (Cdr2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC144810; AA617262; MGC144811	MGC144810; AA617262; MGC144811
Mus musculus	RefSeq	ILMN_224025	ILMN_234915	MYL2	NM_010861.3	NM_010861.3		17906	153791852	NM_010861.3	Myl2	NP_034991.3	ILMN_1260428	002120356	S	464	CGCAGCCTTTCCCCCTGACGTCACCGGCAATCTTGATTATAAGAATTTGG				5qF	Mus musculus myosin, light polypeptide 2, regulatory, cardiac, slow (Myl2), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]	Process by which a cell becomes capable of differentiating autonomously into a muscle cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42694] [evidence IMP]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [evidence IDA]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISO]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	MLC-2v; Mylpc; MLC-2; Mlc2v	MLC-2v; Mylpc; MLC-2; Mlc2v
Mus musculus	RefSeq	ILMN_212449	ILMN_254418	DTX3L	NM_001013371.2	NM_001013371.2		209200	133930783	NM_001013371.2	Dtx3l	NP_001013389.2	ILMN_1220813	000270717	S	3407	CCCTAGGCCAGTGAGTTCCATCCCATAATTCTTTTTCATGTCCATCTCTG	16	-	35928325-35928374	16qB3	Mus musculus deltex 3-like (Drosophila) (Dtx3l), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC103262; BC023741; AU042200	MGC103262; BC023741; AU042200
Mus musculus	RefSeq	ILMN_213906	ILMN_213906	MTMR3	NM_028860.2	NM_028860.2		74302	145207975	NM_028860.2	Mtmr3	NP_083136.2	ILMN_1230862	001450437	S	3841	GCAGTCCAAGAGGCCCATACATTTTGGAATGGGGGCATGGAATAACCTGT				11qA1	Mus musculus myotubularin related protein 3 (Mtmr3), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	AI255150; AW557713; mKIAA0371; FYVE-DSP1; 1700092A20Rik; MGC78036; ZFYVE10	AI255150; AW557713; mKIAA0371; FYVE-DSP1; 1700092A20Rik; MGC78036; ZFYVE10
Mus musculus	RefSeq	ILMN_212527	ILMN_212527	MCM7	NM_008568.2	NM_008568.2		17220	118130733	NM_008568.2	Mcm7	NP_032594.1	ILMN_1213616	002320575	S	2003	GCCATAAGGTTGATGGAGATGTCGAAGGACTCCCTTCTAGGTGAAAAGGG	5	-	138606291-138606340	5qG2	Mus musculus minichromosome maintenance deficient 7 (S. cerevisiae) (Mcm7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IPI]	Mcmd7; mCDC47; AI747533	Mcmd7; mCDC47; AI747533
Mus musculus	Riken	ILMN_204898	ILMN_204898	IDB4	ri|A530086N24|PX00143D13|AK041164|970					AK041164	Idb4		ILMN_1232416	004290546	S	105	ACCCTTTCCAAAACCCCGAGCAGCTCTCCGGTCGATTTCTGGAGCTCGGA										
Mus musculus	RefSeq	ILMN_212920	ILMN_212920	1200016B10RIK	NM_025819.2	NM_025819.2		66875	27229005	NM_025819.2	1200016B10Rik	NP_080095.2	ILMN_2798079	000010427	S	3186	CCCCAAGACTTAAGACATGACCATGCCACCACATTCCACATGGGCTGCTT	1	-	153130295-153130344	1qG2	Mus musculus RIKEN cDNA 1200016B10 gene (1200016B10Rik), mRNA.				C1orf26	C1orf26
Mus musculus	RefSeq	ILMN_193595	ILMN_239463	TICAM1	NM_174989.3	NM_174989.3		106759	144227224	NM_174989.3	Ticam1	NP_778154.1	ILMN_1256875	000870609	S	2054	TCAGCCTCCATCCTTCCCTCAGCCTCCATCCTTCCCACTGCCTCCAGTCT	17	-	56409547-56409596	17qD	Mus musculus toll-like receptor adaptor molecule 1 (Ticam1), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IGI]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor not relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2756] [evidence IMP]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IMP]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response [goid 2281] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 32481] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45359] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IGI]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IGI]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor not relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2756] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of B cell activation [goid 50871] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]		AW547018; TRIF; AW046014; TICAM-1	AW547018; TRIF; AW046014; TICAM-1
Mus musculus	RefSeq	ILMN_193595	ILMN_239463	TICAM1	NM_174989.3	NM_174989.3		106759	144227224	NM_174989.3	Ticam1	NP_778154.1	ILMN_1220387	005690022	S	2153	GACTCCAGGACCTCAGCCTCTCATTATTCACCATGCCCAGATGGTTCAGC	17	-	56409448-56409497	17qD	Mus musculus toll-like receptor adaptor molecule 1 (Ticam1), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IGI]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor not relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2756] [evidence IMP]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IMP]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response [goid 2281] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 32481] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45359] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IGI]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IGI]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor not relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2756] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of B cell activation [goid 50871] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]		AW547018; TRIF; AW046014; TICAM-1	AW547018; TRIF; AW046014; TICAM-1
Mus musculus	MEEBO	ILMN_210047	ILMN_210047	SPIRE1	scl0002246.1_9	NM_194355.1			37595747	NM_194355.1	Spire1		ILMN_2601689	004810672	S	1166	GGCCCAGGACGCCTTTCCGACCACTTTTCTCTACCATACAAACAGCTTCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles [goid 48193] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_247492	ILMN_329537	D030018L15RIK	NR_003627.1	NR_003627.1		402773	153792319	NR_003627.1	D030018L15Rik		ILMN_3160420	000520673	S	5807	GTTCTCCAGACAGAGATCTCCCCCCATTCACCGTGGACTTTGGCAGCTGG				15qF1	Mus musculus RIKEN cDNA D030018L15 gene (D030018L15Rik), non-coding RNA.					
Mus musculus	RefSeq	ILMN_195507	ILMN_248208	CPA4	NM_027926.2	NM_027926.2		71791	141802681	NM_027926.2	Cpa4	NP_082202.1	ILMN_1242888	002750600	S	1785	CTCCTCCTTGCCCCATCTTCCCAGTAGTGGTATGCAGCTCAGGAACACAC	6	+	30541471-30541520	6qA3.3	Mus musculus carboxypeptidase A4 (Cpa4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	1110019K20Rik; AV009555	1110019K20Rik; AV009555
Mus musculus	Riken	ILMN_204385	ILMN_204385	9930004G02RIK	ri|9930004G02|PX00119L13|AK036769|1331					AK036769	9930004G02Rik		ILMN_1249945	004850692	S	1243	GCCTTGTGATGGATGCGATGGATGTAGGAGCAGGGCTGGAGAGTTGACCG										
Mus musculus	Riken	ILMN_201986	ILMN_201986	TIA1	ri|2310026D05|ZX00039F07|AK009502|2025					AK009502	Tia1		ILMN_1218118	007100446	S	1685	TCAGCAGATAAGGTGCTGCTACCAAACCAGATGACCTGAGTTCAGTCCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42036] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IDA]		
Mus musculus	Riken	ILMN_205533	ILMN_205533	D130060C09RIK	ri|D130060C09|PX00185I11|AK051613|1816					AK051613	D130060C09Rik		ILMN_2573285	003190035	S	1578	GGGCAGTGGTGACCCATACCTTTAGTCTACAGAGCCAGTTCCAGAACAGC										
Mus musculus	MEEBO	ILMN_220917	ILMN_220917	5830403F22RIK	scl074743.1_21	XM_150020.1			20845656	XM_150020.1	5830403F22Rik		ILMN_2728567	005090646	S	1104	TCATCAGCTTTAGAAATAGGAGTTCTCCTTGGGGCAGTAAGGGAGATGGT										
Mus musculus	RefSeq	ILMN_189540	ILMN_189540	UBE2M	NM_145578.1	NM_145578.1		22192	21704161	NM_145578.1	Ube2m	NP_663553.1	ILMN_2462202	002060450	S	815	ATCCCTGCCAGGGTTACCGGCCCAGGCATCCCCTGCAAATATTTATTGGG	7	-	13620899-13620948	7qA1	Mus musculus ubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast) (Ube2m), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	MGC37197; MGC25453; UBC12; Ubc-rs2	MGC37197; MGC25453; UBC12; Ubc-rs2
Mus musculus	RefSeq	ILMN_220838	ILMN_311965	D930048N14RIK	XR_035265.1	XR_035265.1		97775	149261892	XR_035265.1	D930048N14Rik		ILMN_2727546	000130594	S	3301	CACTCAACCCTACTGAGCACACTCCAGCGGGGTAAGATGGTGGCACTTGG	11	+	51471057-51471106	11qB1.3	PREDICTED: Mus musculus RIKEN cDNA D930048N14 gene (D930048N14Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_218400	ILMN_218400	LCN13	NM_153558.1	NM_153558.1		227627	23956341	NM_153558.1	Lcn13	NP_705786.1	ILMN_2695360	002810241	S	585	GCTTCCAACACCAAGCTGGGACATCCCTTCACCACACCTCTCCTGGACCA	2	+	25558718-25558767	2qA3	Mus musculus lipocalin 13 (Lcn13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC41397; BC027556	MGC41397; BC027556
Mus musculus	RefSeq	ILMN_218868	ILMN_218868	FGF1	NM_010197.3	NM_010197.3		14164	122937366	NM_010197.3	Fgf1	NP_034327.1	ILMN_2701233	006650209	S	3039	CTGATGATGGTCATTGTAGCCTTAACCGTCAACCTAGTCACCATCCGGGT	18	-	38999147-38999196	18qB3	Mus musculus fibroblast growth factor 1 (Fgf1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IDA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fgf-1; Fgfa; Fam; Dffrx	Fgf-1; Fgfa; Fam; Dffrx
Mus musculus	RefSeq	ILMN_218868	ILMN_218868	FGF1	NM_010197.3	NM_010197.3		14164	122937366	NM_010197.3	Fgf1	NP_034327.1	ILMN_2721110	006420414	S	372	GTGCGGAAAGTGCGGGCGAAGTGTATATAAAGGGTACGGAGACCGGCCAG	18	-	39006739-39006788	18qB3	Mus musculus fibroblast growth factor 1 (Fgf1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IDA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fgf-1; Fgfa; Fam; Dffrx	Fgf-1; Fgfa; Fam; Dffrx
Mus musculus	Riken	ILMN_204529	ILMN_204529	B230371M02RIK	ri|B230371M02|PX00161F07|AK046332|2845					AK046332	B230371M02Rik		ILMN_1254431	000130139	S	2653	CTCGATAGAAAGAGCACACCAATGGTCGTTCAATGCCAGAGGATCACCAA										
Mus musculus	RefSeq	ILMN_212151	ILMN_255017	SENP6	NM_146003.2	NM_146003.2		215351	46560560	NM_146003.2	Senp6	NP_666115.2	ILMN_1254100	004220689	S	4618	TCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCAGC	9	+	79992267-79992316	9qE1	Mus musculus SUMO/sentrin specific peptidase 6 (Senp6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC38009; mKIAA0797; Susp1; E130319N12Rik; 2810017C20Rik	MGC38009; mKIAA0797; Susp1; E130319N12Rik; 2810017C20Rik
Mus musculus	RefSeq	ILMN_230942	ILMN_230942	CRLF3	NM_018776.1	NM_018776.1		54394	9055199	NM_018776.1	Crlf3	NP_061246.1	ILMN_2929221	001690017	S	1962	GGGCTGTGTGCAGTGTTATAGTCAGTGTGATGTCAGGTTGAGAACTGGTC	11	-	79860345-79860394	11qB5	Mus musculus cytokine receptor-like factor 3 (Crlf3), mRNA.				Crlf2; Cytor4; BB164954; Creme9	Crlf2; Cytor4; BB164954; Creme9
Mus musculus	RefSeq	ILMN_192911	ILMN_230942	CRLF3	NM_018776.1	NM_018776.1		54394	9055199	NM_018776.1	Crlf3	NP_061246.1	ILMN_2706803	006980300	S	1468	CCTCTCTGTCCACCGGAAATTAAAAATGTTTCTGGGTTCACCTTGTAAGG	11	-	79860839-79860888	11qB5	Mus musculus cytokine receptor-like factor 3 (Crlf3), mRNA.				Crlf2; Cytor4; BB164954; Creme9	Crlf2; Cytor4; BB164954; Creme9
Mus musculus	RefSeq	ILMN_196106	ILMN_260102	2310047B19RIK	XM_913186.3	XM_913186.3		66962	149259506	XM_913186.3	2310047B19Rik	XP_918279.1	ILMN_2716693	003290553	S	2017	AAACTAGGGAGCTGGAGGAGAGCCCCGTGGTTGGGAATCCTCTCACTGTG				9qA3	PREDICTED: Mus musculus RIKEN cDNA 2310047B19 gene (2310047B19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215626	ILMN_215626	MINA	NM_025910.2	NM_025910.2		67014	31981133	NM_025910.2	Mina	NP_080186.2	ILMN_2739527	001170343	S	2095	CTGCAGTACACATGTCATAAAGATTATGTCAGTAACCTGGCTCGTCTTGC	16	+	59491968-59492017	16qC1.3	Mus musculus myc induced nuclear antigen (Mina), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence ISO]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		1810047J07Rik; 2410057H13Rik; AI449204; 3830408E23Rik	1810047J07Rik; 2410057H13Rik; AI449204; 3830408E23Rik
Mus musculus	RefSeq	ILMN_215626	ILMN_215626	MINA	NM_025910.2	NM_025910.2		67014	31981133	NM_025910.2	Mina	NP_080186.2	ILMN_2884968	003390612	S	1807	CCTGGCACTGTCTCTCTGGTCGGAGTCTTTAATCCAAGTACTCTAGTGCC	16	+	59491680-59491725:59491726-59491729	16qC1.3	Mus musculus myc induced nuclear antigen (Mina), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence ISO]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		1810047J07Rik; 2410057H13Rik; AI449204; 3830408E23Rik	1810047J07Rik; 2410057H13Rik; AI449204; 3830408E23Rik
Mus musculus	RefSeq	ILMN_197340	ILMN_314242	9430008C03RIK	XM_001475889.1	XM_001475889.1		68108	149250389	XM_001475889.1	9430008C03Rik	XP_001475939.1	ILMN_1235519	006760056	S	39	TTCTTCCGCCAGCGCCCATCGTGAAGACCACAGTTTCCTGTCGCGTGGAT				2qH1	PREDICTED: Mus musculus RIKEN cDNA 9430008C03 gene, transcript variant 1 (9430008C03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220873	ILMN_220873	KRT222	NM_172946.1	NM_172946.1		268481	27370459	NM_172946.1	Krt222	NP_766534.1	ILMN_2728021	000150064	S	2666	TTTCAGGCTGGGGGTACCGCAAGGTGGCAGAACTTCACCTAGCACATAGG	11	-	99049207-99049256	11qD	Mus musculus keratin 222 (Krt222), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	6330509G02Rik; MGC100296	6330509G02Rik; MGC100296
Mus musculus	MEEBO	ILMN_195420	ILMN_195420	D730003I15RIK	scl17054.2.1_46						D730003I15Rik		ILMN_2515431	003850403	S	18	CAGAGAGGGTTGGTGTTCGAGATTTGCCATAATGTGTGGGATCAGGAACC										
Mus musculus	RefSeq	ILMN_196982	ILMN_196982	LOC217630	XM_138128.2	XM_138128.2			38050542	XM_138128.2	LOC217630		ILMN_2526480	005490424	S	929	CGTCGCTGATGTCAAACCTGACAGCTCTCAGATGGCAGAGAATGATGGTC										
Mus musculus	RefSeq	ILMN_188822	ILMN_188822	V1RF1	NM_134198.1	NM_134198.1		171232	21717718	NM_134198.1	V1rf1	NP_598959.1	ILMN_1242477	002480095	S	725	GGAGCAATATTTTCCCTAGATCCAGCCATGAGTCCAGAGCAACACAAACC	17	+	21366514-21366563	17qA3.2	Mus musculus vomeronasal 1 receptor, F1 (V1rf1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_215802	ILMN_215802	CPA6	NM_177834.3	NM_177834.3		329093	56119153	NM_177834.3	Cpa6	NP_808502.2	ILMN_2663761	005810026	S	1713	CCACTTTATATCTCTTTAGAGTCCTATTTGATTACAAGGGGGAGGGAATG	1	-	10314975-10315024	1qA2	Mus musculus carboxypeptidase A6 (Cpa6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	9030616D13Rik; MGC141282	9030616D13Rik; MGC141282
Mus musculus	RefSeq	ILMN_191515	ILMN_215802	CPA6	NM_177834.3	NM_177834.3		329093	56119153	NM_177834.3	Cpa6	NP_808502.2	ILMN_2479745	000510601	S	447	AGAGGGGACAATTACTGATGTCCATATTTCCCAAAATGCTTCCAGAACCC	1	-	10478942-10478991	1qA2	Mus musculus carboxypeptidase A6 (Cpa6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	9030616D13Rik; MGC141282	9030616D13Rik; MGC141282
Mus musculus	RefSeq	ILMN_185598	ILMN_238284	IKZF3	NM_011771.1	NM_011771.1		22780	113374151	NM_011771.1	Ikzf3	NP_035901.1	ILMN_1216717	004250612	S	1731	GGCTATCGAAGCCACGATCGCTATGAGTTCTCCTCTCACATCGCCAGAGG	11	-	98328324-98328373	11qD	Mus musculus IKAROS family zinc finger 3 (Ikzf3), mRNA. XM_915425 XM_923689 XM_923696 XM_923700 XM_923704 XM_983715 XM_983788 XM_983820 XM_983864 XM_983905	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Zfpn1a3; 5830411O07Rik; Znfn1a3; Aiolos	Zfpn1a3; 5830411O07Rik; Znfn1a3; Aiolos
Mus musculus	RefSeq	ILMN_222389	ILMN_222389	GSDMDC1	NM_026960.1	NM_026960.1		69146	21312215	NM_026960.1	Gsdmdc1	NP_081236.1	ILMN_2941324	001980102	S	1690	GGGAAGCCAAGAACCATACTCAGTCACAGGGTTATAATGCACTGAGATCC	15	+	75694573-75694622	15qD3	Mus musculus gasdermin domain containing 1 (Gsdmdc1), mRNA.				M2-4; AW558049; DF5L; Dfna5l; 1810036L03Rik	M2-4; AW558049; DF5L; Dfna5l; 1810036L03Rik
Mus musculus	Riken	ILMN_206953	ILMN_206953	D830048B13RIK	ri|D830048B13|PX00200A07|AK086041|3256					AK086041	D830048B13Rik		ILMN_1212818	003190341	S	3046	GAACCACCACAGCCTGGCAGTATATTGTATAAGGCTGTTCTTTGGACAGG										
Mus musculus	RefSeq	ILMN_211106	ILMN_211106	GJC2	NM_175452.3	NM_175452.3		118454	141802174	NM_175452.3	Gjc2	NP_780661.1	ILMN_2612582	000610112	S	19	ATCAGCATCCAGCCGGCAGGTGGAGGGGCTCAGCCGAAGGTTTGCATTTC	11	-	58996260-58996309	11qB1.3	Mus musculus gap junction protein, gamma 2 (Gjc2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IDA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	A wide pore channel activity that enables a direct cytoplasmic connection from one cell to an adjacent cell. The gap junction can pass large solutes as well as electrical signals between cells. Gap junctions consist of two gap junction hemi-channels, or connexons, one contributed by each membrane through which the gap junction passes [goid 5243] [evidence IDA]	MGC130506; B230382L12Rik; Cx47	MGC130506; B230382L12Rik; Cx47
Mus musculus	RefSeq	ILMN_209625	ILMN_211106	GJC2	NM_175452.3	NM_175452.3		118454	141802174	NM_175452.3	Gjc2	NP_780661.1	ILMN_2597606	002360332	S	1990	CTTCTTAGGGGACATCCTGGAAGTTCTGTTGTGCCTTGCTGCTTAGATGC	11	-	58989217-58989266	11qB1.3	Mus musculus gap junction protein, gamma 2 (Gjc2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IDA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	A wide pore channel activity that enables a direct cytoplasmic connection from one cell to an adjacent cell. The gap junction can pass large solutes as well as electrical signals between cells. Gap junctions consist of two gap junction hemi-channels, or connexons, one contributed by each membrane through which the gap junction passes [goid 5243] [evidence IDA]	MGC130506; B230382L12Rik; Cx47	MGC130506; B230382L12Rik; Cx47
Mus musculus	RefSeq	ILMN_215456	ILMN_215456	MRPL18	NM_026310.3	NM_026310.3		67681	146134932	NM_026310.3	Mrpl18	NP_080586.1	ILMN_2659762	002680630	S	190	CAGCCCGACGTGGAGAGTAAGGAAAACGAAGCGGTGGCCCCGGAGTTCAC				17qA1	Mus musculus mitochondrial ribosomal protein L18 (Mrpl18), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]			HSPC071; MRP-L18; 1010001C05Rik; C79879	HSPC071; MRP-L18; 1010001C05Rik; C79879
Mus musculus	MEEBO	ILMN_192020	ILMN_192020	9930031P18RIK	scl43527.1.775_321						9930031P18Rik		ILMN_2484278	005560204	S	12	GGACCCAGTGCCTGATCAGGGCTTGATTAAGTGACAGCCTGAGAGTGGAG										
Mus musculus	MEEBO	ILMN_222836	ILMN_222836	IQCF1	scl36507.2.1_45				51765110	XM_486254	Iqcf1		ILMN_2755507	002600187	S	390	TCACGGGGTGTTATCAAGGGCCAATACCGAATTTCGACCAGCCAGATGCA										
Mus musculus	RefSeq	ILMN_211107	ILMN_239841	4933402N03RIK	NM_173409.4	NM_173409.4		233918	153792322	NM_173409.4	4933402N03Rik	NP_775585.1	ILMN_2612592	000580224	S	1035	GTGCAAGTGTACTGTTCTTCATGTCTCCTGCACGGTGTACCCCCGGCTCC				7qF3	Mus musculus RIKEN cDNA 4933402N03 gene (4933402N03Rik), mRNA.				4930412O05	4930412O05
Mus musculus	MEEBO	ILMN_217198	ILMN_217198	BAI1	scl47832.31_15	NM_174991.2			31341356	NM_174991.2	Bai1		ILMN_2680188	002570364	S	4749	CGGGACCCAGTTCAGGTGCTGGGGCCAAGAATGAGAACGTGGCCACCTTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 16527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_188002	ILMN_188002	TAAR1	NM_053205.1	NM_053205.1		111174	16716512	NM_053205.1	Taar1	NP_444435.1	ILMN_1245503	007160138	S	824	GCTATGTTATCCCACCCTCTCTGAATGACGCACTGTATTGGTTTGGGTAC	10	+	23641035-23641084	10qA4	Mus musculus trace amine-associated receptor 1 (Taar1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence ISO]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence IDA];  [goid 1594] [evidence IDA];  [goid 1594] [evidence ISO]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Trar1; Tar1	Trar1; Tar1
Mus musculus	RefSeq	ILMN_199544	ILMN_199544	LOC383615	XM_357156.1	XM_357156.1			38074134	XM_357156.1	LOC383615		ILMN_1241375	003800754	S	403	CACCCTGGAGCTAGCAACTCTCGATCAGCTGTTTCCCAGAAACTGGGCAC										
Mus musculus	MEEBO	ILMN_186872	ILMN_186872	TRBV19_AE000664_T_CELL_RECEPTOR_BETA_VARIABLE_19_39	TRBV19_AE000664_T_cell_receptor_beta_variable_19_39						TRBV19_AE000664_T_cell_receptor_beta_variable_19_39		ILMN_2439225	006580348	S	4	CATCAAGCTCCATGGACTCTGGGGTTGTCCAGAATCCTAGACATCTGGTC										
Mus musculus	RefSeq	ILMN_204541	ILMN_317618	LOC100045254	XM_001473937.1	XM_001473937.1		100045254	149274591	XM_001473937.1	LOC100045254	XP_001473987.1	ILMN_1245314	000990475	S	498	GTGTCTGAATGACCTTAAGTTCCCCGTGGTTGTGCTGGATGAGTGCAGCC					PREDICTED: Mus musculus similar to prematurely terminated mRNA decay factor-like (LOC100045254), mRNA.					
Mus musculus	RefSeq	ILMN_220480	ILMN_220480	SLC25A28	NM_145156.1	NM_145156.1		246696	21553114	NM_145156.1	Slc25a28	NP_660138.1	ILMN_2722623	006590093	S	1461	GACCTGCTCTAGACTGATGCAGAGGATAAGCAGCGCATCCCCTGGTTCCT	19	-	43738315-43738364	19qC3	Mus musculus solute carrier family 25, member 28 (Slc25a28), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Mfrn2; Mrs3/4; 2210403D18Rik	Mfrn2; Mrs3/4; 2210403D18Rik
Mus musculus	MEEBO	ILMN_217908	ILMN_217908	OLFR891	scl36019.3.332_28	NM_146478.1			33239229	NM_146478.1	Olfr891		ILMN_1233711	000540671	S	446	CTTGATGGGAGGTATTGGTGCAATTGTCCATACAGGGTGTATGATCAGGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_220326	ILMN_255356	MICALCL	XM_922740.2	XM_922740.2		70877	94381193	XM_922740.2	Micalcl	XP_927833.2	ILMN_1221543	006520224	S	2265	GGGCCAGAAAGACGAGAATGACCTAAAGGAGGAGCAAGAAATATTCGAGG				7qF1	PREDICTED: Mus musculus MICAL C-terminal like, transcript variant 6 (Micalcl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a mitogen-activated protein kinase [goid 51019] [evidence IPI]		
Mus musculus	RefSeq	ILMN_193461	ILMN_237405	PCDHB6	NM_053131.1	NM_053131.1		93877	18087780	NM_053131.1	Pcdhb6	NP_444361.1	ILMN_1226638	001570441	S	2036	CTTCACAGGATGAAGACATGCTCACACTCTACCTGGTCATTGCCTTGGCC	18	+	37495717-37495766	18qB3	Mus musculus protocadherin beta 6 (Pcdhb6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcdhb5B; PcdhbF	Pcdhb5B; PcdhbF
Mus musculus	Riken	ILMN_204615	ILMN_204615	A930037D12RIK	ri|A930037D12|PX00067D08|AK044726|2297					AK044726	A930037D12Rik		ILMN_2566348	003360561	S	1501	GGAGCCCTGGAGAGTGAGACTCTTGTTTGGACAAATGGAGAAACTGAGGG										
Mus musculus	MEEBO	ILMN_216514	ILMN_216514	2600011C06RIK	scl067039.8_50	NM_025930.2			42734460	NM_025930.2	2600011C06Rik		ILMN_2671974	003850768	S	2339	TAATTCAGAAGATCACTAGGGGCAAAATTTATTTGAAAAGTACCAAGTTC										
Mus musculus	RefSeq	ILMN_220727	ILMN_220727	H2-Q2	NM_010392.2	NM_010392.2		15013	72535145	NM_010392.2	H2-Q2	NP_034522.2	ILMN_2895301	001740689	S	511	GCTGGTCTTGCAGAGAAGCGCAGGGCCTACCTGGAGGTCGATTGCTTGAC	17	+	35480234-35480283	17qB1	Mus musculus histocompatibility 2, Q region locus 2 (H2-Q2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		H-2Q2	H-2Q2
Mus musculus	MEEBO	ILMN_217809	ILMN_217809	ARID3A	scl38701.12.1_200	NM_007880.1			6681226	NM_007880.1	Arid3a		ILMN_2687828	007400348	S	4679	TCCTTCTGGGTAAATGTGAGCTGGGCTGTTTTGTTAGGAACAGGGGAATT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]		
Mus musculus	Riken	ILMN_203529	ILMN_203529	5330432H08RIK	ri|5330432H08|PX00054F14|AK030565|2751					AK030565	5330432H08Rik		ILMN_1225461	005310072	S	2348	GGTGGATGTGGGTACTGGCTGCTACGGGTGTAAAACCTGACTGCTTGGAG										
Mus musculus	RefSeq	ILMN_216497	ILMN_216497	PDE4A	NM_019798.2	NM_019798.2		18577	9938034	NM_019798.2	Pde4a	NP_062772.2	ILMN_2671726	004900356	S	73	TTTCATCATGCCTCTGGTTGACTTCTTCTGCGAGACCTGCTCCAAGCCCT	9	+	20947512-20947514:20947515-20947561	9qA3	Mus musculus phosphodiesterase 4A, cAMP specific (Pde4a), transcript variant 1, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence ISS]	Dpde2; D9Ertd60e	Dpde2; D9Ertd60e
Mus musculus	RefSeq	ILMN_209025	ILMN_209025	CATSPER4	NM_177866.2	NM_177866.2		329954	31342813	NM_177866.2	Catsper4	NP_808534.1	ILMN_2991970	005310475	S	1517	CCGGAGGAGTCGGGATTCTGGCTGTGAGTGGGCGTACAGAAAGTTGTAGC	4	-	133484189-133484238	4qD3	Mus musculus channel, sperm associated 4 (Catsper4), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IMP]; Cell motility due to movement of cilia or flagella [goid 1539] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5227] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	MGC124305; 4933412L05; MGC124306	MGC124305; 4933412L05; MGC124306
Mus musculus	RefSeq	ILMN_223053	ILMN_223053	OLFR1515	NM_147020.1	NM_147020.1		259022	22128902	NM_147020.1	Olfr1515	NP_667231.1	ILMN_2980457	001570484	S	349	GCAATGTCTTATGACCGTTATGTGGCCATCTGTAAACCACTCCTCTACAC	2	-	86253809-86253858	2qD	Mus musculus olfactory receptor 1515 (Olfr1515), mRNA.				MOR188-1	MOR188-1
Mus musculus	RefSeq	ILMN_216024	ILMN_216024	AGPAT1	NM_018862.2	NM_018862.2		55979	31560789	NM_018862.2	Agpat1	NP_061350.2	ILMN_2666445	001190491	S	1506	AGATGCCAATTTCTGCTTCCCCCTAGCCTCACCCCTGCCCCAGGTAGTGG	17	+	34749213-34749262	17qB1	Mus musculus 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) (Agpat1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IEA]	1-AGP; 1-AGPAT; AW047140	1-AGP; 1-AGPAT; AW047140
Mus musculus	RefSeq	ILMN_220301	ILMN_220301	UTP11L	NM_026031.3	NM_026031.3		67205	146149184	NM_026031.3	Utp11l	NP_080307.1	ILMN_2720334	003060139	S	656	TTGACGCAGCGCATCGAGCGGGAGAAGCAGCTGTTCGTTGTTGCCCAGAA				4qD2.2	Mus musculus UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) (Utp11l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins [goid 32040] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2700082D03Rik; CGI-94; Cgi94	2700082D03Rik; CGI-94; Cgi94
Mus musculus	Riken	ILMN_202309	ILMN_202309	9130423G08RIK	ri|9130423G08|PX00026H12|AK018689|1679					AK018689	9130423G08Rik		ILMN_1216569	002000746	S	1456	GTGTCTACAGACGTGCATTCATGTGAGTCTGGACATATGTGTGTGTGGGC										
Mus musculus	RefSeq	ILMN_217888	ILMN_217888	1100001H23RIK	NM_025806.1	NM_025806.1		66857	13385273	NM_025806.1	1100001H23Rik	NP_080082.1	ILMN_2688894	006280161	S	1789	GGACAAAAAGTGAGACATAGAGATGACAGAAAGCTGCGAATAGGACACCA	6	-	136560650-136560698:136560699-136560699	6qG1	Mus musculus RIKEN cDNA 1100001H23 gene (1100001H23Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187249	ILMN_187249	SCL000528.1_16	scl000528.1_16	AK081027.1			26099622	AK081027.1	scl000528.1_16		ILMN_2442466	002260035	S	5	ACCTCAGAGTCCAAGTCCATGCCAGTGTTGGGTTCTGTATCCAGTGTAAC										
Mus musculus	MEEBO	ILMN_224038	ILMN_224038	BC032265	scl40614.6.1_28				31340883	NM_181420	BC032265		ILMN_2773585	003610592	S	1916	CAATTCTAAAATCAATAACGTTCCATTTGCTTATGTAGCACTTCTGGACC								Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_206144	ILMN_313198	LOC675594	XM_001477076.1	XM_001477076.1		675594	149257956	XM_001477076.1	LOC675594	XP_001477126.1	ILMN_1235795	006280521	S	1360	CACACTTTGCAGATTGCTTCCTCCACCAAATGTGTGAGCATGTGCCTGCT					PREDICTED: Mus musculus similar to very large inducible GTPase 1 (LOC675594), mRNA.					
Mus musculus	RefSeq	ILMN_216025	ILMN_225166	INTU	NM_175515.4	NM_175515.4		380614	124053448	NM_175515.4	Intu	NP_780724.3	ILMN_2666447	002490139	S	6118	GCCCCAGCTTGAGAAACAAAAGGGTACAGTTAAATCATGCCCGTTACTGC				3qB	Mus musculus inturned planar cell polarity effector homolog (Drosophila) (Intu), mRNA.				9230116I04Rik; Pdzk6; mKIAA1284; Pdzd6; 9430087H23Rik	9230116I04Rik; Pdzk6; mKIAA1284; Pdzd6; 9430087H23Rik
Mus musculus	RefSeq	ILMN_211423	ILMN_225166	INTU	NM_175515.4	NM_175515.4		380614	124053448	NM_175515.4	Intu	NP_780724.3	ILMN_2615751	004050170	S	710	AAGCAGGCAGACGGAGAGAGGCTCGTGGTGCATGGCCTGTTGCCAGGAGG	3	+	40476564-40476613	3qB	Mus musculus inturned planar cell polarity effector homolog (Drosophila) (Intu), mRNA.				9230116I04Rik; Pdzk6; mKIAA1284; Pdzd6; 9430087H23Rik	9230116I04Rik; Pdzk6; mKIAA1284; Pdzd6; 9430087H23Rik
Mus musculus	Riken	ILMN_205756	ILMN_205756	A630032G22RIK	ri|A630032G22|PX00144B04|AK041722|2091					AK041722	A630032G22Rik		ILMN_1226097	002570482	S	1845	GGGAGCTACTGGATAGTTACTGGAGGGTTTAATGCTTCCTCCCTGGTCCG										
Mus musculus	RefSeq	ILMN_221510	ILMN_221510	CYP2C55	NM_028089.3	NM_028089.3		72082	146141169	NM_028089.3	Cyp2c55	NP_082365.1	ILMN_2736539	002360427	S	1556	CTCCATATCCTGTCAACTATTAGGGACATCTCTCTCACTACTCCTCTCAC				19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 55 (Cyp2c55), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	2010318C06Rik	2010318C06Rik
Mus musculus	RefSeq	ILMN_260006	ILMN_260006	OLFR1348	NM_146913.1	NM_146913.1		258915	22129066	NM_146913.1	Olfr1348	NP_667124.1	ILMN_2947633	003170239	S	464	GTGGGCTGATTGTCTCAGTGGCCAAAACAACATGCATTGCCAGTCTGTCT	7	-	6454422-6454471	7qA1	Mus musculus olfactory receptor 1348 (Olfr1348), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR103-9	MOR103-9
Mus musculus	RefSeq	ILMN_199855	ILMN_199855	LOC383087	XM_356862.1	XM_356862.1			38078227	XM_356862.1	LOC383087		ILMN_1240284	004070202	S	531	GCTATGTGCCTCTAATGGTCCAGTTTTCAATGTGGACTTAGGCTCAGGTC										
Mus musculus	RefSeq	ILMN_218966	ILMN_218966	SESN2	NM_144907.1	NM_144907.1		230784	21450288	NM_144907.1	Sesn2	NP_659156.1	ILMN_1219984	002060465	S	2127	TGGCTGCCTGTGTGGGAGAGGAGTAAGGACCTCCAGGGACTAGCACTCCA	4	-	132049200-132049249	4qD2.3	Mus musculus sestrin 2 (Sesn2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		MGC11758; Ses2; SEST2; HI95	MGC11758; Ses2; SEST2; HI95
Mus musculus	RefSeq	ILMN_218966	ILMN_218966	SESN2	NM_144907.1	NM_144907.1		230784	21450288	NM_144907.1	Sesn2	NP_659156.1	ILMN_2948945	000290669	S	2302	GCCTGTTCTGCTGGGCAGCCTGTTCTTTGGTTACCTGAGTAGGGGTTCAG	4	-	132049025-132049074	4qD2.3	Mus musculus sestrin 2 (Sesn2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		MGC11758; Ses2; SEST2; HI95	MGC11758; Ses2; SEST2; HI95
Mus musculus	Riken	ILMN_205948	ILMN_205948	TRP63	ri|C130089F05|PX00172O17|AK048623|2634					AK048623	Trp63		ILMN_2576403	004850093	S	1845	CCCCAGCCTGACCTGGAGATCTGTATCAAGCTGGAGGTGTTGAAGTCACA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of a polarized epithelial cell. The polarized epithelial cell can be any of the cells within an epithelium where the epithelial sheet is oriented with respect to the planar axis [goid 30859] [evidence IMP]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell [goid 2347] [evidence IEA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IMP]; The process whose specific outcome is the progression of the urinary bladder over time, from its formation to the mature structure. The urinary bladder is an elastic, muscular sac situated in the anterior part of the pelvic cavity in which urine collects before excretion [goid 60157] [evidence IMP]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]; The separation of the single opening of the digestive, urinary, and reproductive tracts, the cloaca, into multiple isolated openings during development [goid 60197] [evidence IMP]; The process by which the anatomical structures of female genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 48807] [evidence IMP]; The process by which the anatomical structures of the tail are generated and organized. Morphogenesis pertains to the creation of form. The tail is the hindmost part of some animals [goid 35121] [evidence IMP]; The process by which the anatomical structures of the skin are generated and organized. Morphogenesis pertains to the creation of form. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43589] [evidence IMP]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [evidence IMP]; The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [goid 48485] [evidence IMP]; The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2064] [evidence IDA]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IDA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of keratinocyte differentiation [goid 45617] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IDA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A cell-cell signaling process occurring between the two gastrulation-generated layers of the ectoderm and the mesoderm [goid 7499] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates [goid 1736] [evidence IDA]; The process by which the anatomical structures of polarized epithelium are generated and organized. Morphogenesis pertains to the creation of form. A polarized epithelium is an epithelium where the epithelial sheet is oriented with respect to the planar axis [goid 1738] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]		
Mus musculus	Riken	ILMN_205797	ILMN_205797	PTDSS2	ri|6530422L18|PX00315H21|AK032686|1800					AK032686	Ptdss2		ILMN_1232774	005390358	S	1294	CCCCCACCCCCCAAAAAAAAAAAAACACGCACACACACAGGAAAAGTGGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 6659] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: CDP-diacylglycerol + L-serine = CMP + O-sn-phosphatidyl-L-serine [goid 3882] [evidence IMP]		
Mus musculus	RefSeq	ILMN_210666	ILMN_210666	AQP7	NM_007473.3	NM_007473.3		11832	31982531	NM_007473.3	Aqp7	NP_031499.1	ILMN_2943165	003170594	S	1941	GTGGTGCTGGGATCAAACCCAAGGCCTTGTGTATGCTAGGTAATATCCAT	4	-	40980474-40980523	4qA5	Mus musculus aquaporin 7 (Aqp7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]	AQP 7; AQP7L; AQPap	AQP 7; AQP7L; AQPap
Mus musculus	RefSeq	ILMN_260077	ILMN_260077	UGT2A2	NM_001024148.1	NM_001024148.1		552899	66571302	NM_001024148.1	Ugt2a2	NP_001019319.1	ILMN_2793495	006200161	S	2006	CACAAGGGGCTCATAGAGCACACAAATACAGCTCTGGCCACAGGGATTAG	5	-	87888998-87889047	5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide A2 (Ugt2a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184131	ILMN_184131	4930573C08RIK	scl9896.1.1_37						4930573C08Rik		ILMN_2416109	004540463	S	18	CCAGAAAATTTTGTGGCACATGAGTAGCTGCAGCCAGATGTGGCACCAGC										
Mus musculus	RefSeq	ILMN_198074	ILMN_198074	LOC243351	XM_144654.2	XM_144654.2			38081657	XM_144654.2	LOC243351		ILMN_2530399	001780471	S	1023	GACAGAGGAGAAGGACCCGTGTGAGAAAGTCAGCTCTCCCTGGCCTTGGA										
Mus musculus	RefSeq	ILMN_223623	ILMN_223623	OLFR1502	NM_146797.1	NM_146797.1		258793	22129254	NM_146797.1	Olfr1502	NP_667008.1	ILMN_2766675	006550112	S	756	GGGACACTCATCTTTATGTACATACGTAGTGGTTCAAAAAAATCCCTGGA	19	+	13937040-13937089	19qA	Mus musculus olfactory receptor 1502 (Olfr1502), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR211-1; MGC123715; MGC123714	MOR211-1; MGC123715; MGC123714
Mus musculus	RefSeq	ILMN_223623	ILMN_223623	OLFR1502	NM_146797.1	NM_146797.1		258793	22129254	NM_146797.1	Olfr1502	NP_667008.1	ILMN_2873220	006940377	S	447	TATCTGTGGAGTGTGTGGGGCCATTCTGCGTACCACATGCACCTTCTCTC	19	+	13936731-13936780	19qA	Mus musculus olfactory receptor 1502 (Olfr1502), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR211-1; MGC123715; MGC123714	MOR211-1; MGC123715; MGC123714
Mus musculus	RefSeq	ILMN_251429	ILMN_251429	FAIM2	NM_001038658.1	NM_001038658.1		72393	84781819	NM_001038658.1	Faim2	NP_001033747.1	ILMN_3136149	001340746	A	4314	GGAGATATAGCACCAGGCACAAGGACTTGCCTGCTACACACCCAGACGGG	15	-	99327556-99327605	15qF1	Mus musculus Fas apoptotic inhibitory molecule 2 (Faim2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		mKIAA0950; NMP25; 2900002L20Rik; AI854036; lifeguard; Lfg	mKIAA0950; NMP25; 2900002L20Rik; AI854036; lifeguard; Lfg
Mus musculus	RefSeq	ILMN_210232	ILMN_210232	DSCC1	NM_183089.2	NM_183089.2		72107	62821773	NM_183089.2	Dscc1	NP_898912.2	ILMN_1224901	003850561	S	1153	GCGGAGAGAAGCAAACTATAGGTGCGTTGCTTACTAAATATTCTCGCTCC	15	-	54907762-54907811	15qD1	Mus musculus defective in sister chromatid cohesion 1 homolog (S. cerevisiae) (Dscc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC151212; MGC151210; 2010006I05Rik; Dcc1	MGC151212; MGC151210; 2010006I05Rik; Dcc1
Mus musculus	MEEBO	ILMN_187801	ILMN_187801	2200001K16RIK	scl069135.3_74						2200001K16Rik		ILMN_2447216	003890703	S	16	TCAGGGGGTGGTGAGCGGCGTGGGTGATGTCATCGGAGTAACAGGAAGTG										
Mus musculus	MEEBO	ILMN_223917	ILMN_223917	NEUROD2	scl39623.2_265				31982780	NM_010895	Neurod2		ILMN_2771433	005700148	S	1713	GGCAGTTGGTAAGGGGCTGCTGAGTCTCGGGATAGTGTCTCCCCCACTTA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224168	ILMN_241570	ILF2	NM_026374.3	NM_026374.3		67781	118129818	NM_026374.3	Ilf2	NP_080650.1	ILMN_2775891	004220546	S	1395	GCCCTCTGTCCGTCTGTGAGGAAGCAGAATGCCACACATTCCCAATATTT	3	+	90291723-90291772	3qF1	Mus musculus interleukin enhancer binding factor 2 (Ilf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	Tex261; 6230405A16Rik; Tex267; TEG-267	Tex261; 6230405A16Rik; Tex267; TEG-267
Mus musculus	RefSeq	ILMN_229326	ILMN_229326	PRPMP5	NM_001024705.2	NM_001024705.2		381832	116089301	NM_001024705.2	Prpmp5	NP_001019876.2	ILMN_2850496	001690446	S	942	GCCCCATTTTTCATTCCATGCTCCAAAATTCAGTGATGACCACCTTGTTC	6	-	132261900-132261949	6qG1	Mus musculus proline-rich protein MP5 (Prpmp5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MP5; MGC117856	MP5; MGC117856
Mus musculus	RefSeq	ILMN_222228	ILMN_222228	NOL7	NM_023554.2	NM_023554.2		70078	117647256	NM_023554.2	Nol7	NP_076043.2	ILMN_1250073	002120603	S	1078	CAGCTGAAAAGCTATTCTGGTGTTATTGATGTGATTCCTGTTGTCAAGGA	13	+	43497494-43497543	13qA4	Mus musculus nucleolar protein 7 (Nol7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			RARG-1; 2210008F15Rik; NOP27; 5730556I21Rik	RARG-1; 2210008F15Rik; NOP27; 5730556I21Rik
Mus musculus	RefSeq	ILMN_248921	ILMN_248921	MED15	NM_001040683.1	NM_001040683.1		94112	100817038	NM_001040683.1	Med15	NP_001035773.1	ILMN_3128178	002320528	A	3161	CGCCACACTGGGCAGCAATGGGGAGCACTCTGGTGAAAATTCCCCTTTTT	16	-	17651366-17651415	16qA3	Mus musculus mediator complex subunit 15 (Med15), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		Pcqap; AW536074; A230074L19Rik	Pcqap; AW536074; A230074L19Rik
Mus musculus	RefSeq	ILMN_214359	ILMN_252261	2810002O09RIK	NM_175179.3	NM_175179.3		72345	123858769	NM_175179.3	2810002O09Rik	NP_780388.2	ILMN_2772140	005360079	S	915	CCGAGACACTAGAAAGGAAAATGCCAAACCCCAGGATGCCCCTGGACCAA	X	-	92623140-92623189	XqC3	Mus musculus RIKEN cDNA 2810002O09 gene (2810002O09Rik), mRNA.				Wtx	Wtx
Mus musculus	MEEBO	ILMN_187670	ILMN_187670	AHNAK	scl53389.1.1_236						Ahnak		ILMN_2446105	001980592	S	5	TATGCCTGATGTTGGGCTTAATTTGAAAGGACCTAAACTGAAAAGTGGTG						A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence ISS]				
Mus musculus	RefSeq	ILMN_216522	ILMN_216522	RTN4	NM_194054.1	NM_194054.1		68585	34610234	NM_194054.1	Rtn4	NP_918943.1	ILMN_3140071	002940678	A	3332	GGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGGCCACCCATTCAGGG	11	+	29633799-29633840:29636360-29636367	11qA3.3	Mus musculus reticulon 4 (Rtn4), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISS]	Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence ISO]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	mKIAA4153; KIAA4153; ASY; NSP-CL; 1110020G17Rik; C130026I10Rik; AA960376; mKIAA0886; NOGO; AA409940; AA407876	mKIAA4153; KIAA4153; ASY; NSP-CL; 1110020G17Rik; C130026I10Rik; AA960376; mKIAA0886; NOGO; AA409940; AA407876
Mus musculus	RefSeq	ILMN_190944	ILMN_249539	RNF144B	NM_146042.3	NM_146042.3		218215	142376485	NM_146042.3	Rnf144b	NP_666154.2	ILMN_2703642	001770753	S	2985	AGAACTCTAGAAAACTTCTGAATGGCAACCAGCCCAAATCCTTTCAATCA	13	+	47341769-47341818	13qA5	Mus musculus ring finger protein 144B (Rnf144b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC32473; BC025007; E130105P19Rik	MGC32473; BC025007; E130105P19Rik
Mus musculus	RefSeq	ILMN_211539	ILMN_211539	PPT2	NM_019441.4	NM_019441.4		54397	146134491	NM_019441.4	Ppt2	NP_062314.1	ILMN_2616827	003940594	S	371	ACAAGGGTTCCGAGAGGCTGTGGTCCCCATCATGGAAAAGGCCCCTGAAG				17qB1	Mus musculus palmitoyl-protein thioesterase 2 (Ppt2), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-protein + H2O = palmitate + protein [goid 8474] [evidence IMP]	AA672937; 0610007M19Rik	AA672937; 0610007M19Rik
Mus musculus	RefSeq	ILMN_197215	ILMN_329536	ZBTB34	NM_001085507.1	NM_001085507.1		241311	147904570	NM_001085507.1	Zbtb34	NP_001078976.1	ILMN_1253493	003390563	S	1492	TCCGGGGCCACACTGATGACAAACCATTCCGATGCGAGGTCTGTGGGAAG				2qB	Mus musculus zinc finger and BTB domain containing 34 (Zbtb34), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mKIAA1993; Gm349	mKIAA1993; Gm349
Mus musculus	RefSeq	ILMN_210679	ILMN_210679	PPHLN1	NM_146062.2	NM_146062.2		223828	133778934	NM_146062.2	Pphln1	NP_666174.2	ILMN_2732301	000240592	S	3304	ATGAGCCCTAAAATAGATGTGTGAAGATTTGTATTATGCCATTTTGAAAA	15	+	93321625-93321674	15qE3	Mus musculus periphilin 1 (Pphln1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		HSPC206; HSPC232; 1600022A19Rik; MGC27795; 1110063K05Rik	HSPC206; HSPC232; 1600022A19Rik; MGC27795; 1110063K05Rik
Mus musculus	RefSeq	ILMN_210679	ILMN_210679	PPHLN1	NM_146062.2	NM_146062.2		223828	133778934	NM_146062.2	Pphln1	NP_666174.2	ILMN_2743818	006040692	S	3280	GAAATAGAAGAATGGTTAATTTTAATGAGCCCTAAAATAGATGTGTGAAG	15	+	93321601-93321650	15qE3	Mus musculus periphilin 1 (Pphln1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		HSPC206; HSPC232; 1600022A19Rik; MGC27795; 1110063K05Rik	HSPC206; HSPC232; 1600022A19Rik; MGC27795; 1110063K05Rik
Mus musculus	RefSeq	ILMN_210679	ILMN_210679	PPHLN1	NM_146062.2	NM_146062.2		223828	133778934	NM_146062.2	Pphln1	NP_666174.2	ILMN_1243225	004230168	S	346	TGCCGAGTATGTGACGAGGGCCGCAGTTTTTCTCATGATCGAAGAAGTGG	15	+	93250856-93250905	15qE3	Mus musculus periphilin 1 (Pphln1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		HSPC206; HSPC232; 1600022A19Rik; MGC27795; 1110063K05Rik	HSPC206; HSPC232; 1600022A19Rik; MGC27795; 1110063K05Rik
Mus musculus	RefSeq	ILMN_210679	ILMN_210679	PPHLN1	NM_146062.2	NM_146062.2		223828	133778934	NM_146062.2	Pphln1	NP_666174.2	ILMN_1255085	000130148	S	1396	AGTACTAAATAAACATCTACAATAGCTTAAAGTATCTTAATTAGAATGTT	15	+	93319717-93319766	15qE3	Mus musculus periphilin 1 (Pphln1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		HSPC206; HSPC232; 1600022A19Rik; MGC27795; 1110063K05Rik	HSPC206; HSPC232; 1600022A19Rik; MGC27795; 1110063K05Rik
Mus musculus	RefSeq	ILMN_210679	ILMN_210679	PPHLN1	NM_146062.2	NM_146062.2		223828	133778934	NM_146062.2	Pphln1	NP_666174.2	ILMN_2691317	002370328	S	2193	GTAGTTAAGATCATTCCAGATTGCATACAATTAGTGGTACCGTTAGCATT	15	+	93320514-93320563	15qE3	Mus musculus periphilin 1 (Pphln1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		HSPC206; HSPC232; 1600022A19Rik; MGC27795; 1110063K05Rik	HSPC206; HSPC232; 1600022A19Rik; MGC27795; 1110063K05Rik
Mus musculus	RefSeq	ILMN_219276	ILMN_253748	RNF17	NM_001033043.1	NM_001033043.1		30054	74271881	NM_001033043.1	Rnf17	NP_001028215.1	ILMN_2706597	007610379	S	869	GAGGCCATCTGCATGTTCAGCAGTATGGGAAAGATTGAATTTGAGGACTC	14	+	57053453-57053502	14qC3	Mus musculus ring finger protein 17 (Rnf17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	MMIP-2; Mmip2; TDRD4	MMIP-2; Mmip2; TDRD4
Mus musculus	RefSeq	ILMN_221909	ILMN_253748	RNF17	NM_001033043.1	NM_001033043.1		30054	74271881	NM_001033043.1	Rnf17	NP_001028215.1	ILMN_2741929	004890020	S	3087	TAGTGAATATTCACTGCTTAAGAGAACTTCAAGAAAATCTAAAGACAATG	14	+	57102232-57102281	14qC3	Mus musculus ring finger protein 17 (Rnf17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	MMIP-2; Mmip2; TDRD4	MMIP-2; Mmip2; TDRD4
Mus musculus	RefSeq	ILMN_214002	ILMN_253748	RNF17	NM_001033043.1	NM_001033043.1		30054	74271881	NM_001033043.1	Rnf17	NP_001028215.1	ILMN_2643167	007040685	S	1255	GACTTCTGGATACCCAAAAAAGCCCCCTCAGAAAGAGCAGTCTGCTCCTG	14	+	57060393-57060442	14qC3	Mus musculus ring finger protein 17 (Rnf17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	MMIP-2; Mmip2; TDRD4	MMIP-2; Mmip2; TDRD4
Mus musculus	RefSeq	ILMN_213827	ILMN_213827	SP5	NM_022435.2	NM_022435.2		64406	31981231	NM_022435.2	Sp5	NP_071880.1	ILMN_2641201	004290300	S	2004	GAGCTACAGCATGGTACGTTTCTGTAAAGCGAACAGCAGTTGGCAGCGTG	2	+	70315690-70315739	2qC2	Mus musculus trans-acting transcription factor 5 (Sp5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	MGC144801; MGC144802	MGC144801; MGC144802
Mus musculus	RefSeq	ILMN_198111	ILMN_198111	LOC269691	XM_193330.2	XM_193330.2			38081891	XM_193330.2	LOC269691		ILMN_1229841	006180577	S	60	TGACGACATGGGCCACTGCATGAAAGCCGTGACAGATCAGGGTGCTGAGC										
Mus musculus	RefSeq	ILMN_213155	ILMN_213155	EFS	NM_010112.3	NM_010112.3		13644	141801691	NM_010112.3	Efs	NP_034242.2	ILMN_2634222	004610338	S	2515	AGAAACACCAGAGAGCTTCTCCCCTCACAAGTCAGGAGAGCCGGCCACAG	14	-	55535512-55535561	14qC3	Mus musculus embryonal Fyn-associated substrate (Efs), mRNA.		The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_219104	ILMN_219104	MYH2	scl41415.40.1_177	NM_144961.1			21489940	NM_144961.1	Myh2		ILMN_1219423	005490528	S	5400	CCGAAGCGAGGCACAAAATGTGAAACCTTTGGTCATGCGCCTGTGTGATT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IMP]; A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells. In animal cells, the contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis [goid 5826] [evidence IDA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199223	ILMN_199223	LOC380733	XM_354646.1	XM_354646.1			38091923	XM_354646.1	LOC380733		ILMN_1239352	001090521	S	77	CCAACTTTCCTACACGTAACACTCACACGTCTTGGGCACACCTCCAGGCC										
Mus musculus	RefSeq	ILMN_219334	ILMN_208685	CEBPD	NM_007679.4	NM_007679.4		12609	110665734	NM_007679.4	Cebpd	NP_031705.3	ILMN_2707363	007330390	S	2135	GTCTTCATTTTGCAGCTACTTGGGCTTAGGAAATGTGCTTTGTTGTAGCT	16	+	15889513-15889562	16qA2	Mus musculus CCAAT/enhancer binding protein (C/EBP), delta (Cebpd), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]		
Mus musculus	RefSeq	ILMN_208685	ILMN_208685	CEBPD	NM_007679.4	NM_007679.4		12609	110665734	NM_007679.4	Cebpd	NP_031705.3	ILMN_2588570	000770358	S	2096	AAGCACATTTCCTAAGCCCAAGTAGCTGCAAAATGAAGACACAGAAGACA	16	+	15889474-15889523	16qA2	Mus musculus CCAAT/enhancer binding protein (C/EBP), delta (Cebpd), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215821	ILMN_236339	DNMT3L	NM_001081695.1	NM_001081695.1		54427	126158898	NM_001081695.1	Dnmt3l	NP_001075164.1	ILMN_1250149	004280100	S	1709	GGAGGTGCCTACGGCTCTGCACAAGTTCCCGGTGGGATAACCTGCCATGT	10	+	77526254-77526303	10qC1	Mus musculus DNA (cytosine-5-)-methyltransferase 3-like (Dnmt3l), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [evidence IDA]; Increases the activity of an enzyme [goid 8047] [evidence ISO]; Interacting selectively with any enzyme [goid 19899] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D6Ertd14e; ecat7; MGC102308	D6Ertd14e; ecat7; MGC102308
Mus musculus	RefSeq	ILMN_218326	ILMN_218326	HYAL3	NM_178020.2	NM_178020.2		109685	30842787	NM_178020.2	Hyal3	NP_821139.1	ILMN_1215737	002230273	S	1385	GGGACTTTCCCAAGTACATATCCCACTTCCACCAATACAACTTCCATAGA	9	+	107489256-107489305	9qF1	Mus musculus hyaluronoglucosaminidase 3 (Hyal3), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214440	ILMN_225290	OLFR922	NM_146781.1	NM_146781.1		258777	22129288	NM_146781.1	Olfr922	NP_666992.1	ILMN_1246083	005290008	S	547	CCTCTGCTAGAGCTTTCCTGCAGTAGCACTTACATTAATGAGCTTGTAGT	9	+	38623636-38623685	9qA5.1	Mus musculus olfactory receptor 922 (Olfr922), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR161-3	MOR161-3
Mus musculus	RefSeq	ILMN_184428	ILMN_259582	NUDT13	NM_026341.2	NM_026341.2		67725	117606386	NM_026341.2	Nudt13	NP_080617.2	ILMN_1244214	004070026	S	739	GGGCCCGCTGCCTACTTGCCCGCCAGAGTTCCTTTCCCAAGGGGTTATAT	14	+	21129878-21129927	14qA3	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 13 (Nudt13), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	4933433B15Rik	4933433B15Rik
Mus musculus	RefSeq	ILMN_214360	ILMN_214360	COX19	NM_197980.1	NM_197980.1		68033	37574049	NM_197980.1	Cox19	NP_932097.1	ILMN_1221936	001190315	S	434	AGCACACACCGAAATGTTTCCTCTGTTGACCTCGGTTCCCCTCTAGAGAG	5	-	139814053-139814102	5qG2	Mus musculus COX19 cytochrome c oxidase assembly homolog (S. cerevisiae) (Cox19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			1810074D02Rik; 2810437L13Rik	1810074D02Rik; 2810437L13Rik
Mus musculus	RefSeq	ILMN_213251	ILMN_213251	PABPC2	NM_011033.2	NM_011033.2		18459	58331164	NM_011033.2	Pabpc2	NP_035163.1	ILMN_2635205	004570279	S	1783	ACAGGGTCAGGAACCTTGGACTGCTTCCATGTTAGTAACCGCTCCTCAAG	18	+	39934933-39934982	18qB3	Mus musculus poly A binding protein, cytoplasmic 2 (Pabpc2), mRNA.		The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [evidence TAS]	Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence TAS]	Pabp2; PABP+; PABP	Pabp2; PABP+; PABP
Mus musculus	RefSeq	ILMN_221347	ILMN_221347	SLC25A44	NM_178696.3	NM_178696.3		229517	142377008	NM_178696.3	Slc25a44	NP_848811.1	ILMN_2734283	005550243	S	3251	TAAAAGGCACCCCCGTGTCGGAACTCCTACTCTCCCAAGGTCAGGGTCTG	3	-	88214676-88214725	3qF1	Mus musculus solute carrier family 25, member 44 (Slc25a44), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	6720482A19; B430110G05Rik	6720482A19; B430110G05Rik
Mus musculus	Riken	ILMN_204433	ILMN_204433	A630013A09RIK	ri|A630013A09|PX00144O01|AK041469|2179					AK041469	A630013A09Rik		ILMN_1237484	002370278	S	1703	CCGTGTGTCCATGTGTCCGTTTTAGCTGGTGTGACTGAGCTCTTTGTTTC										
Mus musculus	RefSeq	ILMN_198188	ILMN_198188	LOC224876	XM_140045.2	XM_140045.2			38082618	XM_140045.2	LOC224876		ILMN_1257989	004210161	S	2527	GCTAGAGCTGTTGAAAGAATGGAGGTCCTGTTGAATGGCGGTCCTGTTGC										
Mus musculus	RefSeq	ILMN_219415	ILMN_219415	ATPBD4	NM_025675.3	NM_025675.3		66632	142343683	NM_025675.3	Atpbd4	NP_079951.1	ILMN_2708527	005820376	S	1883	TTGAAACATTCAACAGCATTGGATAATCAGAAATATTATCATAAATAGCT	2	-	114342921-114342970	2qE4	Mus musculus ATP binding domain 4 (Atpbd4), mRNA.				5730421E18Rik	5730421E18Rik
Mus musculus	MEEBO	ILMN_211643	ILMN_211643	SHANK2	scl31845.29.1_306	XM_146170.2			38087600	XM_146170.2	Shank2		ILMN_2618088	002810161	S	4373	GGAAGACTTGATAGATCTTGGGGTGACTCGAGTTGGGCATAGGATGAACA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_253993	ILMN_253993	ZDHHC22	NM_001080943.1	NM_001080943.1		238331	124301179	NM_001080943.1	Zdhhc22	NP_001074412.1	ILMN_2886465	006380494	S	743	CTGGTACCCATGTTCAATGTCGGCACCGAAAGCTCGAAGCAGCAGGACAA				12qD2	Mus musculus zinc finger, DHHC-type containing 22 (Zdhhc22), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC157624; Gm262	MGC157624; Gm262
Mus musculus	Riken	ILMN_203440	ILMN_203440	D530030K12RIK	ri|D530030K12|PX00089L06|AK052570|1462					AK052570	D530030K12Rik		ILMN_2557319	006420487	S	1332	ATGGGACCTATCCAGCCAGAGAAGACGGTGATTTGGGCTCAAGAGAGCAG										
Mus musculus	MEEBO	ILMN_191632	ILMN_191632	SCL0001155.1_50	scl0001155.1_50	AK020263.2			26387668	AK020263.2	scl0001155.1_50		ILMN_2480782	001070577	S	20	CAATTCAAGATTGTGACGATAAAGAGGATATGGAACCAGAAGCTCTGGGA										
Mus musculus	RefSeq	ILMN_201502	ILMN_237879	LOC672866	XM_001002093.1	XM_001002093.1		672866	94418401	XM_001002093.1	LOC672866	XP_001002093.1	ILMN_2542530	006020092	S	267	CAGTGGGTCTGAGAAAGACTTTACCCTCAACATTGATCCTGTGGAGGCTA					PREDICTED: Mus musculus similar to Ig kappa chain V-III region MOPC 63 precursor (LOC672866), mRNA.					
Mus musculus	RefSeq	ILMN_188533	ILMN_231957	DNAHC9	XM_618886.3	XM_618886.3		237806	94390470	XM_618886.3	Dnahc9	XP_618886.1	ILMN_2502931	003400528	S	2529	TCAAATTCAGATACTGCTTGTCATTGGGTTAGACAAGTAGACTCCTGGGC				11qB3	PREDICTED: Mus musculus dynein, axonemal, heavy chain 9, transcript variant 2 (Dnahc9), mRNA.	The bundle of microtubules and associated proteins that forms the core of cilia in eukaryotic cells and is responsible for their movements [goid 35085] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_219924	ILMN_219924	TCEAL7	scl54615.5_136	XM_136051.3			38086752	XM_136051.3	Tceal7		ILMN_2715279	003170201	S	521	TCAGTTTCGGCTACAGCCATGTATAAACCTCATGCTGTCCACATCTCACC								Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199402	ILMN_199402	OLFR1107	NM_146844.1	NM_146844.1		258841	22129178	NM_146844.1	Olfr1107	NP_667055.1	ILMN_2685786	002260020	S	874	CTGAGGAACAAAGATGTGAAAGAAGCAGCCAAGAAGTTCATTGGTAGGGA	2	-	86911366-86911415	2qD	Mus musculus olfactory receptor 1107 (Olfr1107), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR172-2	MOR172-2
Mus musculus	RefSeq	ILMN_210027	ILMN_210027	STEAP1	NM_027399.2	NM_027399.2		70358	142370339	NM_027399.2	Steap1	NP_081675.1	ILMN_1221952	001940142	S	913	GCCTGGAATAAATGGGTAGATGTCAGTCAATTTGTATGGTACATGCCTCC	5	-	5736569-5736618	5qA1	Mus musculus six transmembrane epithelial antigen of the prostate 1 (Steap1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	2410007B19Rik; Prss24; Steap	2410007B19Rik; Prss24; Steap
Mus musculus	RefSeq	ILMN_196955	ILMN_225715	GM804	XM_985757.1	XM_985757.1		328121	94393986	XM_985757.1	Gm804	XP_990851.1	ILMN_1237600	004200154	S	328	AACCCAAGGTTCTGCTTGGCATCTGGTGAGTGAGCCGACTGACACTTTCC				12qC2	PREDICTED: Mus musculus gene model 804, (NCBI), transcript variant 2 (Gm804), mRNA.					
Mus musculus	RefSeq	ILMN_214797	ILMN_227186	CENPJ	NM_001014996.1	NM_001014996.1		219103	62945401	NM_001014996.1	Cenpj	NP_001014996.1	ILMN_2652056	002940068	S	4121	CAAAGTACACATCTGGCCGAGTTAGAGTGAAGGACAAAGACGGTAATGTG	14	-	57145776-57145825	14qC3	Mus musculus centromere protein J (Cenpj), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]	Any process that activates or increases the frequency, rate or extent of the JAK-STAT signaling pathway activity [goid 46427] [evidence ISO]; The 'de novo' formation of an astral microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule [goid 30954] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]; Interacting selectively with the microtubule constituent protein gamma-tubulin [goid 43015] [evidence ISO]	4932437H03Rik; LAP; MGC102215; LIP1; Gm81; CPAP	4932437H03Rik; LAP; MGC102215; LIP1; Gm81; CPAP
Mus musculus	Riken	ILMN_206143	ILMN_206143	A530075A22RIK	ri|A530075A22|PX00142K10|AK080168|541					AK080168	A530075A22Rik		ILMN_1229683	000840639	S	435	GGTGCGGACTGACTGCTGGATGTGGGTCCCTCTTGATTGACTAGAGGTGC										
Mus musculus	RefSeq	ILMN_216335	ILMN_216335	EG368203	NM_203660.1	NM_203660.1		368203	45361706	NM_203660.1	EG368203	NP_988991.1	ILMN_2669886	007050040	S	594	CATCGGGACAGTATGCCTCAGGTCAGCCATAGAGCTGCCGGGGATCCTAT	10	-	108136505-108136554	10qD1	Mus musculus predicted gene, EG368203 (EG368203), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC155743; C6.1AL; MGC155745	MGC155743; C6.1AL; MGC155745
Mus musculus	RefSeq	ILMN_212784	ILMN_212784	SLAMF1	NM_013730.4	NM_013730.4		27218	144227207	NM_013730.4	Slamf1	NP_038758.2	ILMN_1249863	002140427	S	1115	GCCAGAGAGCTGACCCATATACCCAGTGAAAGGACTTTTTGAAGGAGGAT	1	+	173729742-173729754:173729755-173729791	1qH3	Mus musculus signaling lymphocytic activation molecule family member 1 (Slamf1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor [goid 46649] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CDw150; MGC151476; CD150; Slam; ESTM51; MGC151472; IPO-3; 4933415F16; AA177906	CDw150; MGC151476; CD150; Slam; ESTM51; MGC151472; IPO-3; 4933415F16; AA177906
Mus musculus	RefSeq	ILMN_212784	ILMN_212784	SLAMF1	NM_013730.4	NM_013730.4		27218	144227207	NM_013730.4	Slamf1	NP_038758.2	ILMN_2721571	001770458	S	1359	CCGTGGTACAGTGTACCATCTTTGCTGTAGCAGATAATGTGGGTTTAGGC	1	+	173729986-173730035	1qH3	Mus musculus signaling lymphocytic activation molecule family member 1 (Slamf1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor [goid 46649] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CDw150; MGC151476; CD150; Slam; ESTM51; MGC151472; IPO-3; 4933415F16; AA177906	CDw150; MGC151476; CD150; Slam; ESTM51; MGC151472; IPO-3; 4933415F16; AA177906
Mus musculus	RefSeq	ILMN_203136	ILMN_323613	LOC100045280	XM_001473988.1	XM_001473988.1		100045280	149258449	XM_001473988.1	LOC100045280	XP_001474038.1	ILMN_1225118	006200523	S	7225	ACCTAGAAGACGGGTGAATGGAAAGGGGAGAGGTTCTGATACTGTGTCTG					PREDICTED: Mus musculus similar to mKIAA1021 protein (LOC100045280), mRNA.					
Mus musculus	RefSeq	ILMN_207039	ILMN_323613	LOC100045280	XM_001473988.1	XM_001473988.1		100045280	149258449	XM_001473988.1	LOC100045280	XP_001474038.1	ILMN_1248388	002120377	S	7118	GCCATAGAACACTAGCCCCTTGCATTCTGCATTTCTTTTGGAAGTTACCC					PREDICTED: Mus musculus similar to mKIAA1021 protein (LOC100045280), mRNA.					
Mus musculus	RefSeq	ILMN_210155	ILMN_323613	LOC100045280	XM_001473988.1	XM_001473988.1		100045280	149258449	XM_001473988.1	LOC100045280	XP_001474038.1	ILMN_2602789	001940112	S	3868	ACATCAGGACAGCATTTCAGAATTCACCCCTCTGGCCTCTTTGCCGAGCT					PREDICTED: Mus musculus similar to mKIAA1021 protein (LOC100045280), mRNA.					
Mus musculus	RefSeq	ILMN_191678	ILMN_323613	LOC100045280	XM_001473988.1	XM_001473988.1		100045280	149258449	XM_001473988.1	LOC100045280	XP_001474038.1	ILMN_2481202	006840767	S	3788	GCCTTTCTGTTGAGCAGCCCACCGTCTTTATGCTTTCCCAGACCGCCAGT					PREDICTED: Mus musculus similar to mKIAA1021 protein (LOC100045280), mRNA.					
Mus musculus	RefSeq	ILMN_184186	ILMN_323613	LOC100045280	XM_001473988.1	XM_001473988.1		100045280	149258449	XM_001473988.1	LOC100045280	XP_001474038.1	ILMN_1257637	006220364	S	1564	CGAGGAACTTCTGCATCTCCACGGTGACGTACATGGATACGGGGATGATG					PREDICTED: Mus musculus similar to mKIAA1021 protein (LOC100045280), mRNA.					
Mus musculus	RefSeq	ILMN_210155	ILMN_323613	LOC100045280	XM_001473988.1	XM_001473988.1		100045280	149258449	XM_001473988.1	LOC100045280	XP_001474038.1	ILMN_2634591	003520424	S	903	GAAGGAAGATGAGACCTTTCCCTGTGACCTGATCTTTCTCTCCAGCAACC					PREDICTED: Mus musculus similar to mKIAA1021 protein (LOC100045280), mRNA.					
Mus musculus	MEEBO	ILMN_222348	ILMN_222348	SKIV2L	scl50011.20.1_22	NM_021337.1			10946649	NM_021337.1	Skiv2l		ILMN_2748317	000060707	S	3074	GGAAATGGAGAGGCTGCGCTTCCTCCTGTCTGACCAGTCGCTGTTACTGC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]		
Mus musculus	RefSeq	ILMN_261512	ILMN_261512	TMEM134	NM_001078649.1	NM_001078649.1		66990	118403329	NM_001078649.1	Tmem134	NP_001072117.1	ILMN_3125890	004070300	A	1381	CAGCCGAGCAGCACAGTAACAAGGCGATGCTTAGAGCCACCAACTGTTTG	19	+	4132170-4132219	19qA	Mus musculus transmembrane protein 134 (Tmem134), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2410001H17Rik; AI463452	2410001H17Rik; AI463452
Mus musculus	RefSeq	ILMN_216827	ILMN_261512	TMEM134	NM_001078649.1	NM_001078649.1		66990	118403329	NM_001078649.1	Tmem134	NP_001072117.1	ILMN_2773422	000290735	S	771	CCCCTGGGACCCTCACAACCACCAGGCCCCTTTGAATTTGCTCAGGAAGT	19	+	4131560-4131609	19qA	Mus musculus transmembrane protein 134 (Tmem134), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2410001H17Rik; AI463452	2410001H17Rik; AI463452
Mus musculus	MEEBO	ILMN_217675	ILMN_217675	9830132L24	scl41841.4.1_103	NM_177563.1			29243899	NM_177563.1	9830132L24		ILMN_2686229	003710692	S	3266	TTTCTAATGATTTTGGAAACTTTGAAACAATATCCACTAGCTGTTTATGT										
Mus musculus	Riken	ILMN_207102	ILMN_207102	E530018N03RIK	ri|E530018N03|PX00319E20|AK089159|984					AK089159	E530018N03Rik		ILMN_2585059	007160097	S	334	TGAGGGCTTGGAGACATTCCATACAGAGCCTCCGACATCAGTCAGCCCGG										
Mus musculus	RefSeq	ILMN_219205	ILMN_219205	SPG21	NM_138584.2	NM_138584.2		27965	88900518	NM_138584.2	Spg21	NP_613050.1	ILMN_2705673	007570008	S	1088	TGCCATCGATCCGTCAGTGGTCAGTGCGGAGGAGCTAGAGGTGCAGAAAG	9	+	65334675-65334724	9qC	Mus musculus spastic paraplegia 21 homolog (human) (Spg21), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			ACP33; MAST; D9Wsu18e; BM-019; GL010; C78576	ACP33; MAST; D9Wsu18e; BM-019; GL010; C78576
Mus musculus	RefSeq	ILMN_223503	ILMN_223503	2700081O15RIK	NM_175381.5	NM_175381.5		108899	118129868	NM_175381.5	2700081O15Rik	NP_780590.2	ILMN_1214482	002030491	S	3637	GGTGAAGTTCCTTCATTGTTTTGTTAATGATATGCTTGCTATTATGACCC	19	+	7499817-7499866	19qA	Mus musculus RIKEN cDNA 2700081O15 gene (2700081O15Rik), mRNA.				AI848741; AW742297; AI255177	AI848741; AW742297; AI255177
Mus musculus	RefSeq	ILMN_226742	ILMN_226742	GLTSCR1	NM_001081418.1	NM_001081418.1		243842	124487236	NM_001081418.1	Gltscr1	NP_001074887.1	ILMN_3080923	006590224	A	4795	CACCCTCTAGTCACAATGGTGGCCTCGGTGCCAGGACGTTGAACAGATAA	7	-	16557126-16557126:16557127-16557175	7qA2	Mus musculus glioma tumor suppressor candidate region gene 1 (Gltscr1), mRNA.					
Mus musculus	RefSeq	ILMN_196709	ILMN_196709	KLK1B9	NM_010116.1	NM_010116.1		13648	21426850	NM_010116.1	Klk1b9	NP_034246.1	ILMN_1254219	005550731	S	594	AGCCCACATAGAGAAGGTGACAGATGTCATGCTGTGTGCAGGAGAGACAG	7	+	51235097-51235146	7qB4	Mus musculus kallikrein 1-related peptidase b9 (Klk1b9), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	mGk-9; Egfbp3; Klk9; Egfbp-3	mGk-9; Egfbp3; Klk9; Egfbp-3
Mus musculus	RefSeq	ILMN_196709	ILMN_196709	KLK1B9	NM_010116.1	NM_010116.1		13648	21426850	NM_010116.1	Klk1b9	NP_034246.1	ILMN_2784773	005960639	S	791	GGATCAAAGACACTATGGCAAAAAACCTCTGAGTGATACACTGTCTGCCT	7	+	51235667-51235698:51235699-51235716	7qB4	Mus musculus kallikrein 1-related peptidase b9 (Klk1b9), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	mGk-9; Egfbp3; Klk9; Egfbp-3	mGk-9; Egfbp3; Klk9; Egfbp-3
Mus musculus	RefSeq	ILMN_196709	ILMN_196709	KLK1B9	NM_010116.1	NM_010116.1		13648	21426850	NM_010116.1	Klk1b9	NP_034246.1	ILMN_2723594	004920133	S	333	GGCTACAACAGGAGCCTCCATAGAAACCACATCCGACATCCTGAGTATGA	7	+	51234740-51234789	7qB4	Mus musculus kallikrein 1-related peptidase b9 (Klk1b9), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	mGk-9; Egfbp3; Klk9; Egfbp-3	mGk-9; Egfbp3; Klk9; Egfbp-3
Mus musculus	RefSeq	ILMN_216889	ILMN_216889	C130050O18RIK	NM_177000.3	NM_177000.3		319772	124301224	NM_177000.3	C130050O18Rik	NP_795974.2	ILMN_2676524	000990136	S	1650	CCCCTCGCTCTATAGCCATTACATTCTGGTACTGTGCAGTTGTTGCCAGC	5	+	139891690-139891739	5qG2	Mus musculus RIKEN cDNA C130050O18 gene (C130050O18Rik), mRNA.					
Mus musculus	MEEBO	ILMN_223798	ILMN_223798	APOM	scl49994.7.1_30				9055161	NM_018816	Apom		ILMN_2769418	002760187	S	651	CGAGTGGAGAAGCCAGCGACTCCTGCCCCCTCTCGTGGATAATAAAGATG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IMP]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200510	ILMN_200510	LOC381746	XM_355732.1	XM_355732.1			38082996	XM_355732.1	LOC381746		ILMN_1237099	007560433	S	624	AATCGAAGGCTTAGCTTTGCCAGTGAGGCCTCTGTGCAGGGCCACGTGTC										
Mus musculus	RefSeq	ILMN_212232	ILMN_212232	MPZL3	NM_176993.3	NM_176993.3		319742	142369836	NM_176993.3	Mpzl3	NP_795967.1	ILMN_1222380	007380349	S	3174	AAGTTAAGCATGTGAGCCTGTCTAATGCACCCTGGGAAGTTTAGTGATGC	9	+	44873166-44873215	9qA5.2	Mus musculus myelin protein zero-like 3 (Mpzl3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body [goid 42633] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5430427F17Rik; A530065I17Rik	5430427F17Rik; A530065I17Rik
Mus musculus	MEEBO	ILMN_212635	ILMN_212635	4833432P19RIK	scl40469.1.1_3	NM_177198.2			31343045	NM_177198.2	4833432P19Rik		ILMN_2628696	000290195	S	674	GGTTCAGAAAGGAGAGAACTTGTTCATGAGTTTATTATACATTTCACTTA										
Mus musculus	Riken	ILMN_203750	ILMN_203750	A130013O22RIK	ri|A130013O22|PX00121A11|AK037391|3093					AK037391	A130013O22Rik		ILMN_1239984	001190403	S	2921	CTCTCACGGGCCTGGGAAAAGTAACGAATGCAATCAACCACCCAGCCAGG										
Mus musculus	MEEBO	ILMN_221112	ILMN_221112	PPIH	scl066101.2_17				21326445	NM_028677	Ppih		ILMN_2731206	003830592	S	501	GCCCAAACTGCCAGTGGTGATCTCACAGTGTGGGGAAATGTAATCTAGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222507	ILMN_222507	KIF1A	NM_008440.1	NM_008440.1		16560	6680557	NM_008440.1	Kif1a	NP_032466.1	ILMN_2965896	005860307	S	5195	AGATGCGGGTCTGAGTTGAAAGCCTTCCGGACTTCCAGTGGCCCAGACCA	1	-	94848831-94848862:94848863-94848880	1qD	Mus musculus kinesin family member 1A (Kif1a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Gm1626; Kns1; ATSV; C630002N23Rik	Gm1626; Kns1; ATSV; C630002N23Rik
Mus musculus	RefSeq	ILMN_214938	ILMN_226410	4922501K12RIK	XM_910194.2	XM_910194.2		105511	94396816	XM_910194.2	4922501K12Rik	XP_915287.1	ILMN_2653670	003450161	S	2194	CCCCAAGGCGGAGTCCATTTCAAAACCGGAATCCAAAGAAGAGGGCTTCA				14qB	PREDICTED: Mus musculus RIKEN cDNA 4922501K12 gene (4922501K12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194614	ILMN_237162	PITX2	NM_001042502.1	NM_001042502.1		18741	109948274	NM_001042502.1	Pitx2	NP_001035967.1	ILMN_2507989	005050075	S	335	GCCCATTCTTGTTTCGCTTTGGATCGTGGAAGTCGGCTCCCTAAAGAGGC	3	+	128917189-128917238	3qG3	Mus musculus paired-like homeodomain transcription factor 2 (Pitx2), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31076] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle [goid 2074] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]	solurshin; Munc30; Brx1a; Pitx2b; Brx1b; 9430085M16Rik; Brx1; Pitx2a; Pitx2c; Otlx2; Rieg; Ptx2	solurshin; Munc30; Brx1a; Pitx2b; Brx1b; 9430085M16Rik; Brx1; Pitx2a; Pitx2c; Otlx2; Rieg; Ptx2
Mus musculus	RefSeq	ILMN_237162	ILMN_237162	PITX2	NM_001042502.1	NM_001042502.1		18741	109948274	NM_001042502.1	Pitx2	NP_001035967.1	ILMN_3043169	006590088	I	763	TGGCCAGCCCCGCTCCTTGGACTCCTCCAAACATAGACTGGAGGTGCATA	3	+	128917617-128917666	3qG3	Mus musculus paired-like homeodomain transcription factor 2 (Pitx2), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31076] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle [goid 2074] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]	solurshin; Munc30; Brx1a; Pitx2b; Brx1b; 9430085M16Rik; Brx1; Pitx2a; Pitx2c; Otlx2; Rieg; Ptx2	solurshin; Munc30; Brx1a; Pitx2b; Brx1b; 9430085M16Rik; Brx1; Pitx2a; Pitx2c; Otlx2; Rieg; Ptx2
Mus musculus	RefSeq	ILMN_237162	ILMN_237162	PITX2	NM_001042502.1	NM_001042502.1		18741	109948274	NM_001042502.1	Pitx2	NP_001035967.1	ILMN_3118071	001820746	A	2166	CTCTGGTGGATGCCTTGTTTCTGAAACTGCTATGTACGACCCATCCTGTG	3	+	128922366-128922415	3qG3	Mus musculus paired-like homeodomain transcription factor 2 (Pitx2), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31076] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle [goid 2074] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]	solurshin; Munc30; Brx1a; Pitx2b; Brx1b; 9430085M16Rik; Brx1; Pitx2a; Pitx2c; Otlx2; Rieg; Ptx2	solurshin; Munc30; Brx1a; Pitx2b; Brx1b; 9430085M16Rik; Brx1; Pitx2a; Pitx2c; Otlx2; Rieg; Ptx2
Mus musculus	Riken	ILMN_206875	ILMN_206875	DPM2	ri|D930043C24|PX00203I24|AK086634|1112					AK086634	Dpm2		ILMN_2583343	001990095	S	991	GAGACCCAGCAAAAGTCCCTGGAACGGAACGCCATTGCTGCTTAAGTTGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISM]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]; A protein complex that possesses dolichyl-phosphate beta-D-mannosyltransferase activity; contains a catalytic subunit, a regulatory subunit, and a third subunit that stabilizes the complex. In human and several other metazoa, the subunits are named DPM1, DPM2 and DPM3, respectively [goid 33185] [evidence ISO]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass [goid 9059] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISO]; The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units [goid 19348] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [evidence ISO]		
Mus musculus	RefSeq	ILMN_196466	ILMN_196466	2310015A05RIK	XM_148062.3	XM_148062.3			38080451	XM_148062.3	2310015A05Rik		ILMN_1237693	005890017	S	82	TCCGCCTCCAATTCCACGATGTCCGCTACGGCACCTCAAGTCACTCCTGG										
Mus musculus	RefSeq	ILMN_257915	ILMN_257915	GRIK5	NM_008168.1	NM_008168.1		14809	6680092	NM_008168.1	Grik5	NP_032194.1	ILMN_3163110	003830390	A	3381	TAGTGGACTTGAGCAAGGGTGTCGCGGACGCCGCATTCTATCCGCACCGT	7	-	25795206-25795255	7qA3	Mus musculus glutamate receptor, ionotropic, kainate 5 (gamma 2) (Grik5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane [goid 31630] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 15277] [evidence IGI]	MGC118086; KA2	MGC118086; KA2
Mus musculus	RefSeq	ILMN_229478	ILMN_229478	ADHFE1	NM_175236.2	NM_175236.2		76187	31340695	NM_175236.2	Adhfe1	NP_780445.1	ILMN_2989650	002060010	S	2892	GTCTTTCCTGTACTGCTCCACGGTGTTATTTAGAGCCCCTGGGGTACCGG	1	+	9562969-9563018	1qA2	Mus musculus alcohol dehydrogenase, iron containing, 1 (Adhfe1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxybutanoate + 2-oxoglutarate = acetoacetate + (R)-2-hydroxyglutarate [goid 47988] [evidence IEA]	Adh8; AI043035; 6330565B14Rik	Adh8; AI043035; 6330565B14Rik
Mus musculus	RefSeq	ILMN_212156	ILMN_212156	SPINLW1	NM_029325.2	NM_029325.2		75526	142378349	NM_029325.2	Spinlw1	NP_083601.1	ILMN_2661558	004280450	S	43	GCCCCTCGCCAGAATGAAGCTTTCTGGATTTGTGAGCATTCTTGTGCTAT	2	-	164418979-164419016:164419017-164419028	2qH3	Mus musculus serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin) (Spinlw1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	1700024E17Rik; Eppin	1700024E17Rik; Eppin
Mus musculus	RefSeq	ILMN_212156	ILMN_212156	SPINLW1	NM_029325.2	NM_029325.2		75526	142378349	NM_029325.2	Spinlw1	NP_083601.1	ILMN_1241630	006180369	S	672	CTGCTCAGCACCACCGTCAAAAGCTCCCAGTTTACTTCCATGTAGCTCTC	2	-	164413876-164413925	2qH3	Mus musculus serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin) (Spinlw1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	1700024E17Rik; Eppin	1700024E17Rik; Eppin
Mus musculus	RefSeq	ILMN_213323	ILMN_213323	GLTSCR2	NM_133831.2	NM_133831.2		68077	142381259	NM_133831.2	Gltscr2	NP_598592.1	ILMN_2635976	003780168	S	1339	CCGAGACAGGTTCAAGAGCTTCCAGAAGAGAAATATGATTGAGCCCCGAG	7	-	16523710-16523759	7qA2	Mus musculus glioma tumor suppressor candidate region gene 2 (Gltscr2), mRNA.				5330430H08Rik; R74911; AU041936; AW536441; 9430097C02Rik	5330430H08Rik; R74911; AU041936; AW536441; 9430097C02Rik
Mus musculus	RefSeq	ILMN_187666	ILMN_235222	ZIM2	XM_922461.2	XM_922461.2		76637	94379593	XM_922461.2	Zim2	XP_927554.1	ILMN_2446073	006250491	S	1080	GATTTAGGGATTAGAAACTTTGCCCAGTGTTGTTCCATCATTTTCAACTG				7qA1	PREDICTED: Mus musculus zinc finger, imprinted 2 (Zim2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_203741	ILMN_203741	9930005O13RIK	ri|9930005O13|PX00119L17|AK036773|2816					AK036773	9930005O13Rik		ILMN_1237978	003400037	S	2535	GTTTGGTCTCCACCAAGACAGGCACGTGGGAGTTTCCTTTCCACACACTG										
Mus musculus	RefSeq	ILMN_200704	ILMN_200704	LOC383460	XM_357074.1	XM_357074.1			38085341	XM_357074.1	LOC383460		ILMN_1213522	000520592	S	15	CCTGCTGATCAAGGGACATAGCCAGGGTGTGTGCTTCTCTGGCTTTGAAG										
Mus musculus	RefSeq	ILMN_217986	ILMN_217986	JAM4	NM_028078.1	NM_028078.1		72058	21312487	NM_028078.1	Jam4	NP_082354.1	ILMN_2919999	002370246	S	1125	GGTGGCATTCCTCATGACTTGACACTCCTGCCGATCCAACGAAGGGCAGA	16	+	96508512-96508561	16qC4	Mus musculus junction adhesion molecule 4 (Jam4), mRNA.				Igsf5; 2010003D20Rik; JCAM	Igsf5; 2010003D20Rik; JCAM
Mus musculus	RefSeq	ILMN_227736	ILMN_227736	1700037C18RIK	NM_028484.1	NM_028484.1		73261	58037322	NM_028484.1	1700037C18Rik	NP_082760.1	ILMN_2800500	001500670	S	499	CCAGGTAACAGCCATTGCTCAGCCCTTCTGGAAGCCCACTTGCCCAGGGA	16	-	3906857-3906906	16qA1	Mus musculus RIKEN cDNA 1700037C18 gene (1700037C18Rik), mRNA.				2810022L20Rik	2810022L20Rik
Mus musculus	RefSeq	ILMN_188906	ILMN_188906	V1RA6	NM_053221.1	NM_053221.1		113848	16716528	NM_053221.1	V1ra6	NP_444451.1	ILMN_1248443	004220215	S	635	GCATGCACAGGAAACAGACACAGCATCTTCATGGAACCAACCTGTCCCCC	6	-	89794847-89794896	6qD1	Mus musculus vomeronasal 1 receptor, A6 (V1ra6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]	V1RA3; V1RA1	V1RA3; V1RA1
Mus musculus	RefSeq	ILMN_216602	ILMN_247020	AGA	NM_001005847.1	NM_001005847.1		11593	54292134	NM_001005847.1	Aga	NP_001005847.1	ILMN_2673077	002100706	S	1037	CTTCCAACATTTACACAATTTAGTTTCATGGTTTCTAATTCTTTACACAA	8	+	54608547-54608596	8qB1.3	Mus musculus aspartylglucosaminidase (Aga), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N(4)-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H2O = N-acetyl-beta-glucosaminylamine + L-aspartate [goid 3948] [evidence IDA]	AW060726	AW060726
Mus musculus	RefSeq	ILMN_221324	ILMN_221324	LIMS2	NM_144862.3	NM_144862.3		225341	146149188	NM_144862.3	Lims2	NP_659111.1	ILMN_1247916	004040438	S	842	CAGCCCTCAGCAAAGCCTGGTGTGTGAACTGCTTTTCCTGTTCCACCTGC				18qB1	Mus musculus LIM and senescent cell antigen like domains 2 (Lims2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PINCH2	PINCH2
Mus musculus	RefSeq	ILMN_221324	ILMN_221324	LIMS2	NM_144862.3	NM_144862.3		225341	146149188	NM_144862.3	Lims2	NP_659111.1	ILMN_2738345	003180681	S	1527	GCAGCCCGAGAGCCCTACTGCCTTCACTACTCAGGAGACCTCATAGAAAG				18qB1	Mus musculus LIM and senescent cell antigen like domains 2 (Lims2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PINCH2	PINCH2
Mus musculus	Riken	ILMN_202356	ILMN_202356	CHIC2	ri|4930502K01|PX00032H03|AK015681|1375					AK015681	Chic2		ILMN_2548974	006770273	S	726	CCTACGGTTACTAGAGTTCAGGCTCAGCATAGCGTGGCTTCAGGCTCCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IDA]	The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis [goid 6893] [evidence TAS]			
Mus musculus	RefSeq	ILMN_187152	ILMN_238647	TRMT2A	NM_001080999.1	NM_001080999.1		15547	124487422	NM_001080999.1	Trmt2a	NP_001074468.1	ILMN_2682887	000940373	S	239	TGCGGTCTACCTTCACGGCGGCGTACCTCGTATCTGCGCCCTTGTTGGGT	16	+	18249214-18249263	16qA3	Mus musculus TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) (Trmt2a), transcript variant 2, mRNA.		Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule [goid 8173] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220635	ILMN_220635	4921517D22RIK	NM_183290.2	NM_183290.2		70900	110347499	NM_183290.2	4921517D22Rik	NP_899113.1	ILMN_1228780	001230278	S	1099	CTAGATGTGGATAGCTGCACTTGGGAACCCGGAGTCGATACAAGAGGCAG	13	-	59790756-59790805	13qB2	Mus musculus RIKEN cDNA 4921517D22 gene (4921517D22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_224375	ILMN_224375	SNORA65	NR_002898.1	NR_002898.1		104367	86604689	NR_002898.1	Snora65		ILMN_2904641	000360097	S	225	GTTCCTGCAATGGAACCCTGGAATTCTTTCCCCTGTGACTGAGGCCACCA	2	+	32819199-32819248	2qB	Mus musculus small nucleolar RNA, H/ACA box 65 (Snora65) on chromosome 2.	A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		Rnu65; MBII-351	Rnu65; MBII-351
Mus musculus	RefSeq	ILMN_197347	ILMN_197347	LOC381405	XM_355367.1	XM_355367.1			38075252	XM_355367.1	LOC381405		ILMN_1219131	006620228	S	1451	CATCCGAGACTCAGCACAAGGGAGAAAACCCCCAAAGGGGACGAGTGTGG										
Mus musculus	RefSeq	ILMN_242071	ILMN_242071	TYW1	NM_001015876.1	NM_001015876.1		100929	62899040	NM_001015876.1	Tyw1	NP_001015876.1	ILMN_3023656	002230612	I	2226	GAGCTTATCTGAGTTAAGGATCTCCAAAGACAAAAGCTGCGTGGCCCCGG	5	+	130816709-130816710:130816711-130816758	5qG1.3	Mus musculus tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) (Tyw1), transcript variant 1, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AW125391; Rsafd1	AW125391; Rsafd1
Mus musculus	RefSeq	ILMN_242071	ILMN_242071	TYW1	NM_001015876.1	NM_001015876.1		100929	62899040	NM_001015876.1	Tyw1	NP_001015876.1	ILMN_3096175	000020477	A	1042	TGCCATGCAGAGGAACCCAGAGAAGACTGAGGACGGCGAAGGAAGAGCTA	5	+	130753832-130753881	5qG1.3	Mus musculus tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) (Tyw1), transcript variant 1, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AW125391; Rsafd1	AW125391; Rsafd1
Mus musculus	RefSeq	ILMN_201350	ILMN_242071	TYW1	NM_001015876.1	NM_001015876.1		100929	62899040	NM_001015876.1	Tyw1	NP_001015876.1	ILMN_1236741	006620576	S	1217	CACACATTCTACGGCATTGAGAGCCACCGCTGCATGGAAGCCACCCCAAG	5	+	130763146-130763195	5qG1.3	Mus musculus tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) (Tyw1), transcript variant 1, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AW125391; Rsafd1	AW125391; Rsafd1
Mus musculus	RefSeq	ILMN_192796	ILMN_242071	TYW1	NM_001015876.1	NM_001015876.1		100929	62899040	NM_001015876.1	Tyw1	NP_001015876.1	ILMN_2491410	002340215	S	2189	CAGAGGAAGAACAAAACGAAGGACATTTCCGGATGTTGAGCTTATCTGAG	5	+	130816672-130816710:130816711-130816721	5qG1.3	Mus musculus tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) (Tyw1), transcript variant 1, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AW125391; Rsafd1	AW125391; Rsafd1
Mus musculus	RefSeq	ILMN_216550	ILMN_216550	DENND1C	NM_153551.1	NM_153551.1		70785	24025655	NM_153551.1	Dennd1c	NP_705779.1	ILMN_2672353	006220044	S	2371	GAGCCCCCACTTATGTCTCTCATGTAAGCACGCAGCAAAGGCCACAGGAC	17	-	57205578-57205627	17qD	Mus musculus DENN/MADD domain containing 1C (Dennd1c), mRNA.				MGC30613; 4432409M07Rik	MGC30613; 4432409M07Rik
Mus musculus	MEEBO	ILMN_190873	ILMN_190873	4933415A04RIK	scl41673.1.1_39						4933415A04Rik		ILMN_2473998	001710273	S	2	CCTGCTGGGGTCTCGTGATCAACAACAGAATGTGCATCAAGGCCAGTATC										
Mus musculus	RefSeq	ILMN_197410	ILMN_197410	LOC381418	XM_358571.1	XM_358571.1			38075640	XM_358571.1	LOC381418		ILMN_1247503	000940609	S	787	TCCGGCAGGAACTCTGAAGAGCCACCACGATGCAGCCGTGAATGATGAGT										
Mus musculus	Riken	ILMN_206008	ILMN_206008	1110001N06RIK	ri|B130038H15|PX00158G03|AK045125|1210					AK045125	1110001N06Rik		ILMN_1239895	000520577	S	877	GGGTGCCAAGATGCATGGGCTCTCTCAGATTCTGGGAAACTTACTGCACC										
Mus musculus	MEEBO	ILMN_184916	ILMN_184916	1700064E03RIK	scl14076.2.1_8						1700064E03Rik		ILMN_1230507	006980626	S	4	GACGACGTGGACAGAGATTTGGCAGAATTCAGCACCAAGGAATGGGCACG										
Mus musculus	MEEBO	ILMN_213596	ILMN_213596	HNRPA1	scl015382.13_13				6754219	NM_010447	Hnrpa1		ILMN_1244536	007610711	S	1339	TGTGCTGTGTAAAGTTAGTCTATTCTGAAGCCATCTTGGTAAACTTCCCC										
Mus musculus	RefSeq	ILMN_197932	ILMN_228173	GM606	NM_001013761.1	NM_001013761.1		239789	71274116	NM_001013761.1	Gm606	NP_001013783.1	ILMN_2529877	003990347	S	146	AATCTGGTGTTGACGTTTCCAAGGAGACTTGGGTCTCTTTCTGGGCTGCT	16	-	26965707-26965756	16qB2	Mus musculus gene model 606, (NCBI) (Gm606), mRNA.				Gm1778	Gm1778
Mus musculus	RefSeq	ILMN_228173	ILMN_228173	GM606	NM_001013761.1	NM_001013761.1		239789	71274116	NM_001013761.1	Gm606	NP_001013783.1	ILMN_2803319	004810398	S	1003	GCCTTTGTGCGTCGAGATGAGGAAGGAGGTTGGAAGTTTACCTGGGTCCC	16	-	26960352-26960401	16qB2	Mus musculus gene model 606, (NCBI) (Gm606), mRNA.				Gm1778	Gm1778
Mus musculus	RefSeq	ILMN_200261	ILMN_200261	LOC386090	XM_359065.1	XM_359065.1			38081135	XM_359065.1	LOC386090		ILMN_1248627	000540408	S	17	TAGACCTTCTCAGGGAACAGTCATACCAGGCTCCTGTCAGCAAGAACTTC										
Mus musculus	RefSeq	ILMN_198643	ILMN_322090	SHANK1	XM_001474910.1	XM_001474910.1		243961	149257136	XM_001474910.1	Shank1	XP_001474960.1	ILMN_1250059	001400424	S	6199	ATATCTGGGGGTCTTGGAGGAGCCTTGTCTGGGGCCTCTCGCTCCCTATC				7qB4	PREDICTED: Mus musculus SH3/ankyrin domain gene 1, transcript variant 1 (Shank1), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]				
Mus musculus	RefSeq	ILMN_243422	ILMN_243422	ZFP817	NM_001007575.1	NM_001007575.1		238693	56119155	NM_001007575.1	Zfp817	NP_001007576.1	ILMN_2833614	002900504	S	1761	AACGTTCATTCTGCAGAGAAACTTGCCCAACTGTGGAGGAAGTGACAGGC	13	-	67591637-67591686	13qB3	Mus musculus zinc finger protein 817 (Zfp817), mRNA.				A530094I17Rik; Rslcan5	A530094I17Rik; Rslcan5
Mus musculus	RefSeq	ILMN_215131	ILMN_215131	AKR1C14	NM_134072.1	NM_134072.1		105387	19527293	NM_134072.1	Akr1c14	NP_598833.1	ILMN_2655871	001690632	S	1867	GCTCAGATGTAGGGAAGTTGAGAAGAAAGCTGAATATGTCTCTGCTTGGG	13	+	4089090-4089139	13qA1	Mus musculus aldo-keto reductase family 1, member C14 (Akr1c14), mRNA.			Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+ [goid 47042] [evidence IEA]	9030611N15Rik; AW557061	9030611N15Rik; AW557061
Mus musculus	RefSeq	ILMN_215131	ILMN_215131	AKR1C14	NM_134072.1	NM_134072.1		105387	19527293	NM_134072.1	Akr1c14	NP_598833.1	ILMN_2921215	006860167	S	1977	GACAGACTGCTAGACTGGATGTTTATATTTTCAAGGGATTCAGAAGTTGC	13	+	4089200-4089249	13qA1	Mus musculus aldo-keto reductase family 1, member C14 (Akr1c14), mRNA.			Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+ [goid 47042] [evidence IEA]	9030611N15Rik; AW557061	9030611N15Rik; AW557061
Mus musculus	RefSeq	ILMN_201403	ILMN_201403	LOC385107	XM_358056.1	XM_358056.1			38093542	XM_358056.1	LOC385107		ILMN_2542170	004290110	S	6	CAGTTCTCTTGGGGTTTCCAAGGCTGTGCTAAATAATGTCATTTTCTGTC										
Mus musculus	RefSeq	ILMN_217492	ILMN_217492	NOXO1	NM_027988.1	NM_027988.1		71893	26080419	NM_027988.1	Noxo1	NP_082264.1	ILMN_2683856	001570048	S	1498	GGCTCTATGGCTGGCAGGGCCACGGGCCAGCTAACTTTCTATTTCCTCTA	17	+	24428055-24428104	17qA3.3	Mus musculus NADPH oxidase organizer 1 (Noxo1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IDA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Increases the activity of the enzyme superoxide-generating NADPH oxidase [goid 16176] [evidence IDA]	hslt; P41NOXB; 2310034C04Rik; Snx28; P41NOX; P41NOXA; P41NOXC	hslt; P41NOXB; 2310034C04Rik; Snx28; P41NOX; P41NOXA; P41NOXC
Mus musculus	RefSeq	ILMN_217492	ILMN_217492	NOXO1	NM_027988.1	NM_027988.1		71893	26080419	NM_027988.1	Noxo1	NP_082264.1	ILMN_1240610	002370672	S	1466	AGACCTCACCAAGAAAGCAGGATTAAGAGTGGGGCTCTATGGCTGGCAGG	17	+	24428023-24428072	17qA3.3	Mus musculus NADPH oxidase organizer 1 (Noxo1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IDA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Increases the activity of the enzyme superoxide-generating NADPH oxidase [goid 16176] [evidence IDA]	hslt; P41NOXB; 2310034C04Rik; Snx28; P41NOX; P41NOXA; P41NOXC	hslt; P41NOXB; 2310034C04Rik; Snx28; P41NOX; P41NOXA; P41NOXC
Mus musculus	MEEBO	ILMN_185159	ILMN_185159	CNOT6L	scl26353.17_86				21450298	NM_144910	Cnot6l		ILMN_1244295	005900097	S	1	TTGTATATGAACCACAGAGGAGCCCATTTATTAATACAAATCTTTTTTAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196609	ILMN_196609	EXOSC2	NM_144886.1	NM_144886.1		227715	21450258	NM_144886.1	Exosc2	NP_659135.1	ILMN_2805829	001580307	S	1382	CCGCTCTGTCTCCTTTAATGCACAAGTGTGTGGTTGGAGAGAAGGTGGTG	2	+	31503075-31503124	2qB	Mus musculus exosome component 2 (Exosc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence ISO]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC30456; Rrp4	MGC30456; Rrp4
Mus musculus	RefSeq	ILMN_208984	ILMN_208984	NDUFC1	NM_025523.1	NM_025523.1		66377	13384945	NM_025523.1	Ndufc1	NP_079799.1	ILMN_1229975	002510605	S	55	TTCGCGGCTGCTGGCCCCCGCCCGGCTGCCGAGCTGCTCTTCAACACGGT	3	-	51212158-51212170:51212786-51212822	3qC	Mus musculus NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 (Ndufc1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		2310016K22Rik; KFYI; MGC106656	2310016K22Rik; KFYI; MGC106656
Mus musculus	RefSeq	ILMN_208984	ILMN_208984	NDUFC1	NM_025523.1	NM_025523.1		66377	13384945	NM_025523.1	Ndufc1	NP_079799.1	ILMN_2983247	005080328	S	99	CACGGTCGAAGTTCTATGTCCGGGAGCCAGTCAATGCCAAACCTAACTGG	3	-	51212114-51212163	3qC	Mus musculus NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1 (Ndufc1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		2310016K22Rik; KFYI; MGC106656	2310016K22Rik; KFYI; MGC106656
Mus musculus	RefSeq	ILMN_185186	ILMN_231621	CSNK1G1	NM_173185.2	NM_173185.2		214897	71773562	NM_173185.2	Csnk1g1	NP_775277.2	ILMN_2424895	001450576	S	7065	GCACCGTGACAACACAAATGTGATCTTTAAGTATACCTCTTCCCCCTGGG	9	+	65892703-65892752	9qC	Mus musculus casein kinase 1, gamma 1 (Csnk1g1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	9130020E21Rik	9130020E21Rik
Mus musculus	RefSeq	ILMN_185186	ILMN_231621	CSNK1G1	NM_173185.2	NM_173185.2		214897	71773562	NM_173185.2	Csnk1g1	NP_775277.2	ILMN_2736639	002710437	S	2456	TGGCGTTCTTAGCTTTTTTGACAAGCAGATCCCTTGCTCCGGGCTGTAGC	9	+	65888094-65888143	9qC	Mus musculus casein kinase 1, gamma 1 (Csnk1g1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	9130020E21Rik	9130020E21Rik
Mus musculus	RefSeq	ILMN_185186	ILMN_231621	CSNK1G1	NM_173185.2	NM_173185.2		214897	71773562	NM_173185.2	Csnk1g1	NP_775277.2	ILMN_2591345	000450286	S	1577	AGACCAATACCTCATACCTGACGTCTCACTTGGCCGCAGACCGCCATGGG	9	+	65867658-65867707	9qC	Mus musculus casein kinase 1, gamma 1 (Csnk1g1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	9130020E21Rik	9130020E21Rik
Mus musculus	RefSeq	ILMN_185186	ILMN_231621	CSNK1G1	NM_173185.2	NM_173185.2		214897	71773562	NM_173185.2	Csnk1g1	NP_775277.2	ILMN_1245758	000830446	S	1820	CTCAAGTCCTGGGGACTCTGGCTCCAATTGCACCTGCAGCTCCTGCCATT	9	+	65887458-65887507	9qC	Mus musculus casein kinase 1, gamma 1 (Csnk1g1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	9130020E21Rik	9130020E21Rik
Mus musculus	RefSeq	ILMN_211769	ILMN_211769	GABRA5	NM_176942.4	NM_176942.4		110886	146198779	NM_176942.4	Gabra5	NP_795916.1	ILMN_2619378	006580228	S	2358	TTCAAAGTTAATTTTGGTTTTGGTGGAAAATAAATATATTTCTTACCCTA				7qC	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 5 (Gabra5), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]	A230018I05Rik	A230018I05Rik
Mus musculus	RefSeq	ILMN_215804	ILMN_215804	CNBP	NM_013493.2	NM_013493.2		12785	42476048	NM_013493.2	Cnbp	NP_038521.1	ILMN_2663780	004180368	S	1424	AAGTCAGATGGAAAAAGCAACTGAAGTCCTAGAAAATAGAAAATGTAATT	6	-	87793202-87793251	6qD1	Mus musculus cellular nucleic acid binding protein (Cnbp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Znf9; AA408710; Cnbp1	Znf9; AA408710; Cnbp1
Mus musculus	RefSeq	ILMN_240345	ILMN_240345	PRSS3	NM_011645.1	NM_011645.1		22073	6755890	NM_011645.1	Prss3	NP_035775.1	ILMN_2896385	004810221	S	596	ACTCCGGTGGCCCTGTGGTCTGCAATAGAGAACTCCAGGGTATAGTCTCC	6	-	41324881-41324930	6qB1	Mus musculus protease, serine, 3 (Prss3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MTG; PRSS$; TRY4; Try3; Tb	MTG; PRSS$; TRY4; Try3; Tb
Mus musculus	RefSeq	ILMN_197937	ILMN_197937	LOC224098	XM_148286.3	XM_148286.3			38079740	XM_148286.3	LOC224098		ILMN_1224877	005670671	S	110	GCCCCTTACAGAGCTTGCACTCTGGTGAACAGACCCTACTGAGCACCCTC										
Mus musculus	MEEBO	ILMN_186694	ILMN_186694	JMY	scl43679.13_637				10946587	NM_021310	Jmy		ILMN_2437714	005820707	S	9	CTTCCACGGTGCCCAGTATCCACAGACACTGCTTGTCTTTGCTGTTCCCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_229637	ILMN_229637	0610007C21RIK	NM_212470.2	NM_212470.2		381629	57526830	NM_212470.2	0610007C21Rik	NP_997635.1	ILMN_3092673	002710446	A	743	ATTGCACCACCTCGGGGGTCTTGTGGACACTTGGTTCAGGAGTGGACTCG	5	+	31356894-31356943	5qB1	Mus musculus RIKEN cDNA 0610007C21 gene (0610007C21Rik), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AI316792; HSPC013; Apr3; p18	AI316792; HSPC013; Apr3; p18
Mus musculus	RefSeq	ILMN_188157	ILMN_229637	0610007C21RIK	NM_212470.2	NM_212470.2		381629	57526830	NM_212470.2	0610007C21Rik	NP_997635.1	ILMN_1230777	004150678	S	747	CACCACCTCGGGGGTCTTGTGGACACTTGGTTCAGGAGTGGACTCGTACT	5	+	31356898-31356947	5qB1	Mus musculus RIKEN cDNA 0610007C21 gene (0610007C21Rik), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AI316792; HSPC013; Apr3; p18	AI316792; HSPC013; Apr3; p18
Mus musculus	RefSeq	ILMN_213711	ILMN_213711	LYPD3	NM_133743.1	NM_133743.1		72434	19526945	NM_133743.1	Lypd3	NP_598504.1	ILMN_1248916	003940138	S	1496	CTGGTCGCCTGTCTTCCTTAGGAGACTGTGAACAACTCTACAACAGGGTC	7	+	25426004-25426053	7qA3	Mus musculus Ly6/Plaur domain containing 3 (Lypd3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]	Any process involved in the controlled movement of a cell [goid 6928] [evidence ISO]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence ISO]	Interacting selectively with laminins, glycoproteins that are major constituents of the basement membrane of cells [goid 43236] [evidence ISO]	C4.4a; 2310061G07Rik	C4.4a; 2310061G07Rik
Mus musculus	Riken	ILMN_204755	ILMN_204755	B930059G17RIK	ri|B930059G17|PX00164H10|AK047416|3576					AK047416	B930059G17Rik		ILMN_1246748	002760221	S	3374	TGAATAGAATCGAAGACCTGGAAGTAAACCCACACACCTATGGACAGTTG										
Mus musculus	RefSeq	ILMN_209645	ILMN_209645	1810020G14RIK	NM_025461.4	NM_025461.4		66272	146135011	NM_025461.4	1810020G14Rik	NP_079737.1	ILMN_2597810	003060594	S	1761	CCTAAGCCACAACCCTTCTTGTTTGTCCATGGTGTCATGCTAATGTCATA				12qD1	Mus musculus RIKEN cDNA 1810020G14 gene (1810020G14Rik), mRNA.				MGC118423; BB388670; 1810055I05Rik	MGC118423; BB388670; 1810055I05Rik
Mus musculus	RefSeq	ILMN_222852	ILMN_222852	NOB1	NM_026277.3	NM_026277.3		67619	146134926	NM_026277.3	Nob1	NP_080553.1	ILMN_2755782	000270437	S	887	GACGATGGGACCTTGCACATGCATTTCTCCCGAAACCCGAAAGTTCTGAA				8qD3	Mus musculus NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) (Nob1), mRNA. XM_001003700	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISA]	Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule [goid 30490] [evidence ISA]; The formation of the constituents of the small ribosomal subunit, their assembly, and their transport to the sites of protein synthesis [goid 42274] [evidence ISA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC144650; Nob1p; 1700021I09Rik; Psmd8bp1; MGC118441; MGC144649; ART-4	MGC144650; Nob1p; 1700021I09Rik; Psmd8bp1; MGC118441; MGC144649; ART-4
Mus musculus	RefSeq	ILMN_220357	ILMN_220357	RETN	NM_022984.3	NM_022984.3		57264	21687157	NM_022984.3	Retn	NP_075360.1	ILMN_2721016	000130438	S	827	ACCCAGGGCATTTACACCACCTGGGGCAGAGGATATCGTTTTCCTTGTAT	8	+	3657803-3657852	8qA1.1	Mus musculus resistin (Retn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Fizz3; Rstn; Xcp4; ADSF	Fizz3; Rstn; Xcp4; ADSF
Mus musculus	MEEBO	ILMN_224283	ILMN_224283	BC024868	scl0232947.1_69				40255284	NM_199149	BC024868		ILMN_2777872	004490768	S	2801	AACCTGGCCTGGGAGGATTAAGAGTCGGGTCAAACGTACAACGGGTCCTG										
Mus musculus	RefSeq	ILMN_195770	ILMN_259638	VHL	NM_009507.3	NM_009507.3		22346	118130344	NM_009507.3	Vhl	NP_033533.1	ILMN_2518546	002570576	S	2524	CCGATCTCTGTCTCTAAAAGATGTGATGTTTGTGTTATTCAGCTGGAAGT	6	+	113581421-113581470	6qE3	Mus musculus von Hippel-Lindau syndrome (Vhl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels during angiogenesis [goid 43534] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	VHL	VHL
Mus musculus	RefSeq	ILMN_189860	ILMN_232895	HSPA12A	NM_175199.3	NM_175199.3		73442	142388274	NM_175199.3	Hspa12a	NP_780408.1	ILMN_1229783	006450612	S	4021	GGATGGACAGATACAGAATGAGGGAAGGGACTTCAAATGCAAGTTGGATT	19	-	58871903-58871952	19qD2-qD3	Mus musculus heat shock protein 12A (Hspa12a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW556406; mKIAA0417; 1700063D12Rik; AI118035; D5Mgi40; AW048913; AI840429	AW556406; mKIAA0417; 1700063D12Rik; AI118035; D5Mgi40; AW048913; AI840429
Mus musculus	RefSeq	ILMN_198016	ILMN_198016	LOC330134	XM_287472.2	XM_287472.2			38080331	XM_287472.2	LOC330134		ILMN_2530181	000240240	S	601	CATTCCAGTTTAGTGTGTGCTGCCAAAGCAGATGTCTCGGTGGTCCTTCC										
Mus musculus	MEEBO	ILMN_189182	ILMN_189182	1500035N22RIK	scl28026.2.1_278						1500035N22Rik		ILMN_1252650	001850189	S	20	AAAGGCAAACCAGTAGCAGAATGCAAAGACCTGTCTGGAAGGACCACTGG										
Mus musculus	RefSeq	ILMN_219243	ILMN_219243	EHHADH	NM_023737.2	NM_023737.2		74147	31541814	NM_023737.2	Ehhadh	NP_076226.2	ILMN_2706120	006040133	S	2572	AAGTGGCATGGACATACAAGTCACACATTTCAGCTGTGTGACGGAACATG	16	-	21761708-21761757	16qB1	Mus musculus enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase (Ehhadh), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IMP]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O [goid 4300] [evidence IEA]; Catalysis of the reaction: 3-cis-dodecenoyl-CoA = 2-trans-dodecenoyl-CoA [goid 4165] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+ [goid 3857] [evidence TAS]	MFP1; MFP; LBFP; 1300002P22Rik; PBFE; L-PBE; LBP; HD	MFP1; MFP; LBFP; 1300002P22Rik; PBFE; L-PBE; LBP; HD
Mus musculus	RefSeq	ILMN_215421	ILMN_215421	GPRC5C	NM_147217.1	NM_147217.1		70355	22267463	NM_147217.1	Gprc5c	NP_671750.1	ILMN_3050926	003990450	I	30	TTAGCTCAGTGCTCAGTCGGGGGTCCCTGGGAGGCAGGCCCCCGCACCTT	11	+	114668174-114668223	11qE2	Mus musculus G protein-coupled receptor, family C, group 5, member C (Gprc5c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with the sevenless (sev) protein, a receptor tyrosine kinase [goid 5118] [evidence IEA]	3200002M13Rik; 1110028I06Rik; MGC6786; MGC11976	3200002M13Rik; 1110028I06Rik; MGC6786; MGC11976
Mus musculus	RefSeq	ILMN_215421	ILMN_215421	GPRC5C	NM_147217.1	NM_147217.1		70355	22267463	NM_147217.1	Gprc5c	NP_671750.1	ILMN_3127190	000940066	A	1380	TGATGCACAAAGGCCCGTCTGAAGGTGCATACGACGTCATCCTCCCACGG	11	+	114682795-114682809:114684586-114684620	11qE2	Mus musculus G protein-coupled receptor, family C, group 5, member C (Gprc5c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with the sevenless (sev) protein, a receptor tyrosine kinase [goid 5118] [evidence IEA]	3200002M13Rik; 1110028I06Rik; MGC6786; MGC11976	3200002M13Rik; 1110028I06Rik; MGC6786; MGC11976
Mus musculus	MEEBO	ILMN_193417	ILMN_193417	D0H6S2654E	scl44917.3.1_0						D0H6S2654E		ILMN_1214635	002490088	S	16	AGGAGGAGAACCGGTTGCGCGAGGAACTGCGGCAGGAGTGGGAGGCGAAG										
Mus musculus	Riken	ILMN_205409	ILMN_205409	E030050A11RIK	ri|E030050A11|PX00207J23|AK053245|1167					AK053245	E030050A11Rik		ILMN_1244249	002680044	S	981	CTTCAGGGATGTCTCACAGTGCAGCAGCCATAGTACTGGGGGATGACTAG										
Mus musculus	RefSeq	ILMN_213508	ILMN_213508	PSG19	NM_011964.1	NM_011964.1		26439	6755191	NM_011964.1	Psg19	NP_036094.1	ILMN_2931800	007570768	S	1456	TCAGCGTCTGCAGCTCACAGAGAGGATGACACTGTCCCCATCAAAATGCC	7	-	19375515-19375564	7qA3	Mus musculus pregnancy specific glycoprotein 19 (Psg19), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		Cea-4; CGM7; MGC117673; Cea4	Cea-4; CGM7; MGC117673; Cea4
Mus musculus	RefSeq	ILMN_213508	ILMN_213508	PSG19	NM_011964.1	NM_011964.1		26439	6755191	NM_011964.1	Psg19	NP_036094.1	ILMN_1227375	004290482	S	896	AAGGACATCGGATTCTACACCCTACGAACTCTGAATAGATATTCGAGAAT	7	-	19379413-19379462	7qA3	Mus musculus pregnancy specific glycoprotein 19 (Psg19), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		Cea-4; CGM7; MGC117673; Cea4	Cea-4; CGM7; MGC117673; Cea4
Mus musculus	RefSeq	ILMN_213508	ILMN_213508	PSG19	NM_011964.1	NM_011964.1		26439	6755191	NM_011964.1	Psg19	NP_036094.1	ILMN_1240551	005860397	S	380	CGAGTCTTTGCCTGGTACAGAGGGGTAATAAAATTTAAGCTTGGAATTGC	7	-	19382340-19382389	7qA3	Mus musculus pregnancy specific glycoprotein 19 (Psg19), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		Cea-4; CGM7; MGC117673; Cea4	Cea-4; CGM7; MGC117673; Cea4
Mus musculus	MEEBO	ILMN_192488	ILMN_192488	SCL0003253.1_81	scl0003253.1_81	AK031541.1			26327394	AK031541.1	scl0003253.1_81		ILMN_1258778	004150020	S	10	CCCCTTCTCCAAGTTTTGACAGTTTGAGCTGAAAGAATGCAGCGCCTCCC										
Mus musculus	RefSeq	ILMN_189219	ILMN_189219	TULP4	NM_054040.2	NM_054040.2		68842	142383137	NM_054040.2	Tulp4	NP_473381.1	ILMN_1252283	004260047	S	8832	TCCAGACAAGATCTGTTGAGAGTCACCATTGCATCTCAATGAGCTCTCCC	17	+	6240369-6240418	17qA1	Mus musculus tubby like protein 4 (Tulp4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110057P05Rik; Tusp	1110057P05Rik; Tusp
Mus musculus	Riken	ILMN_202489	ILMN_202489	1110001C23RIK	ri|1110001C23|R000013I15|AK003209|1452					AK003209	1110001C23Rik		ILMN_2550016	006940487	S	1327	AGGATTGTCCAGTGTGTTCTGAAGCGTGTACAACTTAGGCTCAAGCAGAT										
Mus musculus	RefSeq	ILMN_247326	ILMN_247326	TMPRSS9	NM_001081688.1	NM_001081688.1		432478	126157516	NM_001081688.1	Tmprss9	NP_001075157.1	ILMN_3142104	005080674	A	3293	GCCAGAACATCCAGGAATGATTGCCCTGTGGCTAGCAACCCAGGCGTGGA	10	+	80362066-80362085:80362086-80362115	10qC1	Mus musculus transmembrane protease, serine 9 (Tmprss9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Serase-1B	Serase-1B
Mus musculus	RefSeq	ILMN_239207	ILMN_239207	SERPINA3K	NM_011458.1	NM_011458.1		20714	33859635	NM_011458.1	Serpina3k	NP_035588.1	ILMN_2970494	002810364	S	1658	CTTGATGGGACCATGCTGGCCTCTGGGCTAACCCTTGAGAATCAGGCCCA	12	+	105583977-105584026	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 3K (Serpina3k), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	MMSpi2; Spi-2; Spi2; 1300001I07Rik; RP54; contrapsin; D12Rp54; MMCM2	MMSpi2; Spi-2; Spi2; 1300001I07Rik; RP54; contrapsin; D12Rp54; MMCM2
Mus musculus	RefSeq	ILMN_213086	ILMN_213086	PPARD	NM_011145.3	NM_011145.3		19015	89001112	NM_011145.3	Ppard	NP_035275.1	ILMN_1221142	000240717	S	3072	GCTGAGGATGCAGCTCCTCTCAGGGTCTGAAGTCTCCAAATCTGAAATGT	17	+	28432952-28433001	17qA3.3	Mus musculus peroxisome proliferator activator receptor delta (Ppard), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process by which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal [goid 8366] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14068] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence NAS]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IMP]; The directed movement of keratinocytes, epidermal cells which synthesize keratin, from one site to another [goid 51546] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [pmid 14676330] [evidence IEP]; The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15908] [pmid 14676330] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence TAS]; Interacting selectively with a retinoid X receptor [goid 46965] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with prostacyclin (PGI(2)) to initiate a change in cell activity [goid 16501] [evidence TAS]; Increases the activity of an enzyme [goid 8047] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence TAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	PPAR[b]; Pparb; PPAR-beta; NUC1; PPARdelta; Nr1c2; NUC-1; PPAR-delta; Pparb/d	PPAR[b]; Pparb; PPAR-beta; NUC1; PPARdelta; Nr1c2; NUC-1; PPAR-delta; Pparb/d
Mus musculus	RefSeq	ILMN_213086	ILMN_213086	PPARD	NM_011145.3	NM_011145.3		19015	89001112	NM_011145.3	Ppard	NP_035275.1	ILMN_2633449	001510202	S	1638	AGCCACGGACTGTTCAGAGGACCAGCCACAGGCACTGGCAGTCAAGCAGC	17	+	28430951-28431000	17qA3.3	Mus musculus peroxisome proliferator activator receptor delta (Ppard), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process by which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal [goid 8366] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14068] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence NAS]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IMP]; The directed movement of keratinocytes, epidermal cells which synthesize keratin, from one site to another [goid 51546] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [pmid 14676330] [evidence IEP]; The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15908] [pmid 14676330] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence TAS]; Interacting selectively with a retinoid X receptor [goid 46965] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with prostacyclin (PGI(2)) to initiate a change in cell activity [goid 16501] [evidence TAS]; Increases the activity of an enzyme [goid 8047] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence TAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	PPAR[b]; Pparb; PPAR-beta; NUC1; PPARdelta; Nr1c2; NUC-1; PPAR-delta; Pparb/d	PPAR[b]; Pparb; PPAR-beta; NUC1; PPARdelta; Nr1c2; NUC-1; PPAR-delta; Pparb/d
Mus musculus	RefSeq	ILMN_211311	ILMN_211311	POLI	NM_011972.1	NM_011972.1		26447	6755273	NM_011972.1	Poli	NP_036102.1	ILMN_2614540	001030161	S	2234	TCGGCGCACAGATAAGTCCAGAAAGCCAGGGAGTATGAGTCCCCAGGTCG	18	-	70668532-70668567:70668568-70668581	18qE2	Mus musculus polymerase (DNA directed), iota (Poli), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IDA]	Rad30b	Rad30b
Mus musculus	RefSeq	ILMN_221675	ILMN_221675	PLCG1	NM_021280.3	NM_021280.3		18803	118129851	NM_021280.3	Plcg1	NP_067255.2	ILMN_1227561	005310259	S	4087	ATGCGGCAAGCTGCAAGTTTTGGAGGACAAAGTCATTACTACCCTCTGGC	2	+	160601148-160601197	2qH2	Mus musculus phospholipase C, gamma 1 (Plcg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a glutamate receptor [goid 35254] [evidence IPI]	Plc-gamma1; Plc-1; Plcg-1; AI894140; Cded	Plc-gamma1; Plc-1; Plcg-1; AI894140; Cded
Mus musculus	RefSeq	ILMN_219733	ILMN_219733	LZTS1	NM_199364.1	NM_199364.1		211134	40786423	NM_199364.1	Lzts1	NP_955396.1	ILMN_2953460	004390435	S	1460	TGGGGCCTCCAGGGGTTGGGCTCACTTTCTCAGAGGACATCCCTGCTCTG	8	-	71659692-71659741	8qB3.3	Mus musculus leucine zipper, putative tumor suppressor 1 (Lzts1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		FEZ1; F37	FEZ1; F37
Mus musculus	MEEBO	ILMN_210383	ILMN_210383	SLC12A1	scl0003143.1_462	NM_011389.1			6755531	NM_011389.1	Slc12a1		ILMN_2605076	003460678	S	2808	TCCCTTCTGTTCACGGAACATGTTGAGGACTAATATCTCATTGGAGGTAT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184572	ILMN_184572	SCL0003177.1_2	scl0003177.1_2						scl0003177.1_2		ILMN_2419750	004120564	S	2	GCAGGTCTCAGAGAGGAGCTGAGATGAGCCCACTACAGCCACTCAAGATG										
Mus musculus	RefSeq	ILMN_221868	ILMN_221868	DKK4	NM_145592.2	NM_145592.2		234130	128485763	NM_145592.2	Dkk4	NP_663567.1	ILMN_2741421	001510008	S	1179	CTGAGATGCTATACTCTGATGAGCCAGCGACTTTTGGCTTTGCGTCTACT	8	+	23737883-23737932	8qA2	Mus musculus dickkopf homolog 4 (Xenopus laevis) (Dkk4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]		MGC25705; Dkk-4	MGC25705; Dkk-4
Mus musculus	RefSeq	ILMN_185681	ILMN_228894	YBX1	NM_011732.2	NM_011732.2		22608	113205058	NM_011732.2	Ybx1	NP_035862.2	ILMN_2429092	003940497	S	1755	GGGACTAATGGCTGCTAGTTGTCCGCCAAGTCCATCAACTTTTTAGGCCA	4	-	118950318-118950367	4qD2.1	Mus musculus Y box protein 1 (Ybx1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1700102N10Rik; YB-1; MSY1; MGC118070; Nsep1; mYB-1a; C79409; dbpB; EF1A	1700102N10Rik; YB-1; MSY1; MGC118070; Nsep1; mYB-1a; C79409; dbpB; EF1A
Mus musculus	RefSeq	ILMN_191462	ILMN_241674	BBS10	XM_125817.6	XM_125817.6		71769	94388659	XM_125817.6	Bbs10	XP_125817.5	ILMN_1238590	002680253	S	2430	CAACCCAGTCCTTAAGTCCATTGAGTCCACCAGACCATTCAGACAACAGG	10	+	110738469-110738518	10qD1	PREDICTED: Mus musculus Bardet-Biedl syndrome 10 (human), transcript variant 1 (Bbs10), mRNA.		The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191462	ILMN_241674	BBS10	XM_125817.6	XM_125817.6		71769	94388659	XM_125817.6	Bbs10	XP_125817.5	ILMN_1217075	003060296	S	1975	TCCCACACATATACATGCGGTCTCTCCATGCACTGCAAGCCAGTCAACCC	10	+	110738014-110738063	10qD1	PREDICTED: Mus musculus Bardet-Biedl syndrome 10 (human), transcript variant 1 (Bbs10), mRNA.		The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190428	ILMN_190428	COL5A2	scl16804.56_40				6680969	NM_007737	Col5a2		ILMN_2599650	007160356	S	4144	TCACTCAGATGACCTTTTTCCGTCTTTTATCAAAAGAAGCCTCGCAGAAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]	The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]		
Mus musculus	MEEBO	ILMN_190428	ILMN_190428	COL5A2	scl16804.56_40				6680969	NM_007737	Col5a2		ILMN_2470069	002360612	S	18	ATTTTCTAACACACGTGCCCAGTAATGAATGTTAAGACTCTCCCACAGTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]	The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210756	ILMN_210756	HOXA9	NM_010456.2	NM_010456.2		15405	118130021	NM_010456.2	Hoxa9	NP_034586.1	ILMN_2772762	007650017	S	2064	CCGAGCAAAAGACGAGTGAGCCTTTTAGGGGCTCATTTAAAAAGAGAGCA	6	-	52174211-52174242:52174243-52174260	6qB3	Mus musculus homeo box A9 (Hoxa9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	Hox-1.7; D6a9	Hox-1.7; D6a9
Mus musculus	RefSeq	ILMN_210756	ILMN_210756	HOXA9	NM_010456.2	NM_010456.2		15405	118130021	NM_010456.2	Hoxa9	NP_034586.1	ILMN_1258462	007560543	S	1942	TTTAACATGTACCTCACACGGGACCGCAGGTACGAGGTGGCCCGGCTGCT	6	-	52174333-52174382	6qB3	Mus musculus homeo box A9 (Hoxa9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	Hox-1.7; D6a9	Hox-1.7; D6a9
Mus musculus	RefSeq	ILMN_198905	ILMN_226035	SLC9A5	NM_001081332.1	NM_001081332.1		277973	124486738	NM_001081332.1	Slc9a5	NP_001074801.1	ILMN_1223654	006400112	S	2836	AACCTGTTGAGGGAGAGCGGCAGTGGAGCGTGTCTGGATCTGCAGGTGAT	8	+	107883073-107883080:107883227-107883268	8qD3	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 5 (Slc9a5), mRNA.				Gm696	Gm696
Mus musculus	Riken	ILMN_204917	ILMN_204917	C230012D11RIK	ri|C230012D11|PX00173A18|AK048705|1224					AK048705	C230012D11Rik		ILMN_2568610	001740192	S	675	GTCCTCCTAAGGGTGAGTTGCCTGAGCAGCAGGTGAAGTTGAATGAAGCA										
Mus musculus	MEEBO	ILMN_220091	ILMN_220091	RBP1	scl36582.7.1_25	NM_011254.2			24475931	NM_011254.2	Rbp1		ILMN_1238433	006860609	S	2499	TCTGCCTAACATGGGGACCGAAACGCATACCCACCCCAGGCTTCTGCCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IMP]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IGI]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IGI]	Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 5501] [evidence TAS]; Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197169	ILMN_320728	LOC675534	XR_032234.1	XR_032234.1		675534	149249100	XR_032234.1	LOC675534		ILMN_1227275	006900398	S	651	GCTGTTTGGGCTCTTGGAAACATTGCTGGTTTAGTTATCAAACACGGTGC					PREDICTED: Mus musculus similar to karyopherin (importin) alpha 2 (LOC675534), misc RNA.					
Mus musculus	RefSeq	ILMN_221639	ILMN_221639	DUSP19	NM_024438.4	NM_024438.4		68082	146135052	NM_024438.4	Dusp19	NP_077758.1	ILMN_2738264	006180372	S	917	CCTTTTCTGTTGTCTTTTACCAGTGGAAATGAACGTTACCTTTGTCGCCC				2qC3	Mus musculus dual specificity phosphatase 19 (Dusp19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]; Catalysis of the reaction: protein threonine/tyrosine phosphate + H2O = protein threonine/tyrosine + phosphate [goid 8330] [evidence IDA]; Catalysis of the reaction: JUN kinase serine/threonine/tyrosine phosphate + H2O = JUN kinase serine/threonine/tyrosine + phosphate [goid 8579] [evidence IDA]	C79103; 5930436K22Rik; SKRP1; TS-DSP1	C79103; 5930436K22Rik; SKRP1; TS-DSP1
Mus musculus	RefSeq	ILMN_215263	ILMN_215263	BARX1	NM_007526.3	NM_007526.3		12022	145966906	NM_007526.3	Barx1	NP_031552.1	ILMN_1259956	007200376	S	353	CCCTGGGCCTGAGCCAGTTACAGGTGAAGACGTGGTATCAAAATCGGAGG				13qA5	Mus musculus BarH-like homeobox 1 (Barx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IGI]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220632	ILMN_220632	GRINL1A	NM_178602.2	NM_178602.2		28015	142359777	NM_178602.2	Grinl1a	NP_848717.1	ILMN_1215367	005900296	S	2064	GAGCAAAGATAACAGTATGTTATCAAAAGCCTTTGTCTATTACGTGGAAC	9	-	71326311-71326360	9qD	Mus musculus glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A (Grinl1a), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IMP]	Any process by which the endoplasmic reticulum is maintained in a specific location within a cell and prevented from moving elsewhere [goid 51685] [evidence IMP]		D9Wsu138e; AA407243; AI303746; AW553238; KIAA4185; mKIAA4185; AA408799	D9Wsu138e; AA407243; AI303746; AW553238; KIAA4185; mKIAA4185; AA408799
Mus musculus	RefSeq	ILMN_217178	ILMN_317670	PGBD1	XR_032424.1	XR_032424.1		319207	149263922	XR_032424.1	Pgbd1		ILMN_1214826	000450370	S	2798	CCAGGTTTCCAGAAATGTGTGGCATGTTTTCGCTTGGGACATGATGCTAA	13	-	21513990-21514039	13qA3.1	PREDICTED: Mus musculus piggyBac transposable element derived 1 (Pgbd1), misc RNA.					
Mus musculus	RefSeq	ILMN_213300	ILMN_213300	ESD	NM_016903.4	NM_016903.4		13885	146134463	NM_016903.4	Esd	NP_058599.1	ILMN_1219686	005860491	S	588	GCTGTGTTCTTGGGGCAAAAAAGCTTTTAGTGGATATTTGGGACCAGATG				14qD3	Mus musculus esterase D/formylglutathione hydrolase (Esd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: S-formylglutathione + H2O = glutathione + formate [goid 18738] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IDA]	Es10; Es-10; sid478	Es10; Es-10; sid478
Mus musculus	RefSeq	ILMN_213300	ILMN_213300	ESD	NM_016903.4	NM_016903.4		13885	146134463	NM_016903.4	Esd	NP_058599.1	ILMN_1229306	001850554	S	1281	GGCCAGTCATTAAGAGGATAGGGAAACGGGCACAGGAGAGTCAGGCACAC				14qD3	Mus musculus esterase D/formylglutathione hydrolase (Esd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: S-formylglutathione + H2O = glutathione + formate [goid 18738] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IDA]	Es10; Es-10; sid478	Es10; Es-10; sid478
Mus musculus	RefSeq	ILMN_210702	ILMN_210702	PPIE	NM_019489.2	NM_019489.2		56031	31340612	NM_019489.2	Ppie	NP_062362.1	ILMN_2970691	003290278	S	466	AGCAGGCCGCATTCAGATGCTCCTACGGTCTGATGTGGTGCCCATGACCG	4	-	122635538-122635587	4qD2.2	Mus musculus peptidylprolyl isomerase E (cyclophilin E) (Ppie), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Cyp33; 2010010D16Rik	Cyp33; 2010010D16Rik
Mus musculus	RefSeq	ILMN_210702	ILMN_210702	PPIE	NM_019489.2	NM_019489.2		56031	31340612	NM_019489.2	Ppie	NP_062362.1	ILMN_2970685	002230242	S	833	TTGCGGCAGATCGAGGCTCAGGGCAGCAAGGATGGGAAGCCAAAGCAGAA	4	-	122629713-122629749:122629941-122629953	4qD2.2	Mus musculus peptidylprolyl isomerase E (cyclophilin E) (Ppie), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Cyp33; 2010010D16Rik	Cyp33; 2010010D16Rik
Mus musculus	RefSeq	ILMN_212584	ILMN_212584	TRAPPC9	NM_029640.1	NM_029640.1		76510	30840991	NM_029640.1	Trappc9	NP_083916.1	ILMN_3163481	001010139	A	3162	CAACCCAAGCAAGGAGGGAGACAGTGTGGGTGAGCAGGGTGAGCAGGCAT	15	-	72420139-72420188	15qD3	Mus musculus trafficking protein particle complex 9 (Trappc9), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		KIAA1882; 4632408O18Rik; mKIAA1882; Ibp; 2900005P22Rik; Nibp	KIAA1882; 4632408O18Rik; mKIAA1882; Ibp; 2900005P22Rik; Nibp
Mus musculus	RefSeq	ILMN_187445	ILMN_254844	4930579E17RIK	NM_178629.4	NM_178629.4		75847	146198810	NM_178629.4	4930579E17Rik	NP_848744.1	ILMN_2654721	006110768	S	790	CACTGGACCGTGCCAAGCATAGGGCAAGCGAAATGCCCCAGGCTTTTCTC				12qA3	Mus musculus RIKEN cDNA 4930579E17 gene (4930579E17Rik), mRNA.		The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	Riken	ILMN_202143	ILMN_202143	2900060F21RIK	ri|2900060F21|ZX00069K04|AK013732|1657					AK013732	2900060F21Rik		ILMN_2547333	005570301	S	1144	GTCCTGAAGAGAGCAGCAGTGAGGATCAAACTGCAAAAACGCCTGAAAGC										
Mus musculus	Riken	ILMN_203125	ILMN_203125	DEXI	ri|6330587M05|PX00044M18|AK032104|2534					AK032104	Dexi		ILMN_1234308	004860681	S	2298	GGCTCATTGGCTTAGGTGCTGGGGAAGGGTGTGTGGTGTGGGCTTTGTGT										
Mus musculus	RefSeq	ILMN_215135	ILMN_240210	BCR	NM_001081412.1	NM_001081412.1		110279	124487228	NM_001081412.1	Bcr	NP_001074881.1	ILMN_2658322	007050280	S	3022	GCTAGAAGGCTCCCAGACCCTGCGGATACTATGTTATGAAAAGTGTTACA	10	+	74630866-74630915	10qB5.3-qC1	Mus musculus breakpoint cluster region homolog (Bcr), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	mKIAA3017; BCR gene; 5133400C09Rik; AI561783; AI853148	mKIAA3017; BCR gene; 5133400C09Rik; AI561783; AI853148
Mus musculus	RefSeq	ILMN_215135	ILMN_240210	BCR	NM_001081412.1	NM_001081412.1		110279	124487228	NM_001081412.1	Bcr	NP_001074881.1	ILMN_1218201	005050687	S	1315	GCAGTGCCAGGTTGTGGTGTCTGAGGCTACCATCGTGGGTGTCCGCAAGA	10	+	74524955-74525004	10qB5.3-qC1	Mus musculus breakpoint cluster region homolog (Bcr), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	mKIAA3017; BCR gene; 5133400C09Rik; AI561783; AI853148	mKIAA3017; BCR gene; 5133400C09Rik; AI561783; AI853148
Mus musculus	RefSeq	ILMN_215135	ILMN_240210	BCR	NM_001081412.1	NM_001081412.1		110279	124487228	NM_001081412.1	Bcr	NP_001074881.1	ILMN_2691538	002230373	S	4217	GCCTGCGGACAAGGGAAAAGAGGCGGAGAAGAGAGTGGTTTTTACGAATC	10	+	74645348-74645397	10qB5.3-qC1	Mus musculus breakpoint cluster region homolog (Bcr), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	mKIAA3017; BCR gene; 5133400C09Rik; AI561783; AI853148	mKIAA3017; BCR gene; 5133400C09Rik; AI561783; AI853148
Mus musculus	RefSeq	ILMN_213968	ILMN_213968	SERPINB1B	NM_173052.1	NM_173052.1		282663	27413903	NM_173052.1	Serpinb1b	NP_766640.1	ILMN_2642840	005700561	S	1462	AAAAGCTAAAGAATTAAATAGATGTATAGATTCATGACTGTGAGGTAACC	13	+	33186060-33186109	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 1b (Serpinb1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IPI]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IPI]	ovalbumin; 6330533H24Rik; RP23-391I11.5; Serpin1b1; EIB	ovalbumin; 6330533H24Rik; RP23-391I11.5; Serpin1b1; EIB
Mus musculus	Riken	ILMN_202882	ILMN_202882	A230005M18RIK	ri|A230005M18|PX00126L01|AK038414|870					AK038414	A230005M18Rik		ILMN_2553035	006650445	S	809	CAGCCACCCTGTGCTTTAAGATCTGGCAAATCTCAAATAAGAAACAGGCC										
Mus musculus	RefSeq	ILMN_214218	ILMN_214218	VSIG1	NM_030181.2	NM_030181.2		78789	142346492	NM_030181.2	Vsig1	NP_084457.1	ILMN_1236731	002060491	S	1514	CATAACAAAGGCCAAGGCCAAGACACGTGGTTTATTTCTAATTTACTTGG	X	+	137472830-137472879	XqF1	Mus musculus V-set and immunoglobulin domain containing 1 (Vsig1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4930405J24Rik; 1700062D20Rik	4930405J24Rik; 1700062D20Rik
Mus musculus	RefSeq	ILMN_212197	ILMN_212197	DUOXA1	NM_145395.2	NM_145395.2		213696	124430554	NM_145395.2	Duoxa1	NP_663370.2	ILMN_2623884	000610554	S	1421	TGTATCCAACTTGTTGATGTAACAGAATAATATACACAGCCTACTAATGC	2	-	122129311-122129360	2qE5	Mus musculus dual oxidase maturation factor 1 (Duoxa1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Nip; RP23-173H17.4; MGC25550; BC019755	Nip; RP23-173H17.4; MGC25550; BC019755
Mus musculus	RefSeq	ILMN_201070	ILMN_201070	LOC384749	XM_357840.1	XM_357840.1			38088571	XM_357840.1	LOC384749		ILMN_1258395	000360551	S	1066	ACCTCTGTCTGCAGTGAAAGCTGCCTTCCAGGGTTCAGCCAAGTGCCCAG										
Mus musculus	Riken	ILMN_203267	ILMN_203267	PTPRM	ri|9430017K16|PX00107L13|AK020422|545					AK020422	Ptprm		ILMN_2555991	003180474	S	419	GCATGCACAACCATCCACCCTTCACCACTCCAGAGGATCTGATGGGCTCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201538	ILMN_250092	EG666577	XM_984280.2	XM_984280.2		666577	149271677	XM_984280.2	EG666577	XP_989374.2	ILMN_1248932	000540725	S	22	CCTCCCAGGCGCTCGGCTGTGTCAAGATGAAGCTGAACATCTCCTTCCCC	X	-	66859396-66859420:66859421-66859445	XqA7.1	PREDICTED: Mus musculus predicted gene, EG666577 (EG666577), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_208965	ILMN_208965	ORM2	scl25363.4.1_1	NM_011016.1			6754949	NM_011016.1	Orm2		ILMN_2591264	006350288	S	354	GCAGACCTGATAGTCTTGAAGATGCATGGGGCCTTCATGCTTGCCTTTGA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214712	ILMN_214712	MAK3	scl0072117.2_260	XM_148131.1			20892560	XM_148131.1	Mak3		ILMN_2651025	005900059	S	925	TGAAGGAGGAGAAGATAGATCTGTATAGTTTCACAGTTAAGATGTCCCGA										
Mus musculus	Riken	ILMN_202458	ILMN_202458	4930569O18RIK	ri|4930569O18|PX00036K07|AK016259|763					AK016259	4930569O18Rik		ILMN_2549772	001660364	S	492	CTGTGACAGCTCTGACCCTGCTTGAGAAGATGAAAGATACTAGCCGCAAG										
Mus musculus	RefSeq	ILMN_211065	ILMN_211065	ARHGEF18	NM_133962.3	NM_133962.3		102098	41056260	NM_133962.3	Arhgef18	NP_598723.3	ILMN_2612125	000130008	S	5193	CCTACCCCTGATTATTTTCACAGCGATAGCAGAGCATCCTGGCAACAGGG	8	+	3456493-3456542	8qA1.1	Mus musculus rho/rac guanine nucleotide exchange factor (GEF) 18 (Arhgef18), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISO]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISO]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	D030053O22Rik; AI467246	D030053O22Rik; AI467246
Mus musculus	RefSeq	ILMN_214571	ILMN_214571	FERMT3	NM_153795.1	NM_153795.1		108101	24418902	NM_153795.1	Fermt3	NP_722490.1	ILMN_2649392	000160259	S	1797	CTGCGCTTTATCCAGGCCTGGCAATCCTTGCCCGACTTTGGCATCTCCTA	19	-	7076251-7076300	19qA	Mus musculus fermitin family homolog 3 (Drosophila) (Fermt3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm [goid 2102] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC38286; MGC36836; Kindlin-3; C79673	MGC38286; MGC36836; Kindlin-3; C79673
Mus musculus	RefSeq	ILMN_200577	ILMN_200577	LOC383371	XM_357015.1	XM_357015.1			38083872	XM_357015.1	LOC383371		ILMN_1253005	004040092	S	277	GTTGCGTGCTCTGTGCGTGCTCTGTGCCTTACTGAATGCCTTTACGGGCC										
Mus musculus	Riken	ILMN_201943	ILMN_201943	ANXA10	ri|9130006K20|PX00026G03|AK018597|1226					AK018597	Anxa10		ILMN_1244342	004150059	S	730	GCTACCCACAACTTTGGCTGGGTAACTAGAAACAGGCTCTTTCCAGCTCT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213404	ILMN_213404	FSTL3	NM_031380.1	NM_031380.1		83554	13878202	NM_031380.1	Fstl3	NP_113557.1	ILMN_2636738	002350239	S	1079	TCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATATGGCTGGCCTCAGAC	10	+	79244522-79244571	10qC1	Mus musculus follistatin-like 3 (Fstl3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]	Acts to negatively regulate the activity of activin, a nonsteroidal regulator synthesized in the pituitary gland and gonads that stimulates the secretion of follicle-stimulating hormone [goid 17106] [evidence IDA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [evidence IDA]	Flrg; E030038F23Rik	Flrg; E030038F23Rik
Mus musculus	RefSeq	ILMN_184921	ILMN_224858	1700055N04RIK	XM_902380.2	XM_902380.2		73458	94405717	XM_902380.2	1700055N04Rik	XP_907473.1	ILMN_2608638	006280148	S	511	CTGTGAACACCCCATTTCTGGAATTTTTTCTGAGCTACCTGTAGCCAGGC	19	+	3970053-3970102	19qA	PREDICTED: Mus musculus RIKEN cDNA 1700055N04 gene, transcript variant 3 (1700055N04Rik), mRNA.					
Mus musculus	MEEBO	ILMN_190339	ILMN_190339	RNF150	scl33615.9.1_232				31340792	NM_177378	Rnf150		ILMN_1228838	002510730	S	2628	GGGAGTGGGAAGCAGGGCATGCAGGAGTTATTCTGGGATCTGTAAACACC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_207325	ILMN_207325	4933409K12RIK	ri|4933409K12|PX00642E15|AK077132|1654					AK077132	4933409K12Rik		ILMN_1226769	006510520	S	1401	CCTGGTTCCACACCAATGAGCCTTGAGCCTTGAGAATATGACGCTGAGTG										
Mus musculus	RefSeq	ILMN_210197	ILMN_210197	EID2	NM_198425.2	NM_198425.2		386655	65301483	NM_198425.2	Eid2	NP_940817.1	ILMN_1223895	001230725	S	480	GCGATGCCGTACATGCGCTTCCGCCACCCCCTCAGCGTCTTGGGCATCAA	7	+	29053379-29053428	7qA3	Mus musculus EP300 interacting inhibitor of differentiation 2 (Eid2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	EID-2; Cri2	EID-2; Cri2
Mus musculus	RefSeq	ILMN_186373	ILMN_241741	TCERG1L	NM_183289.2	NM_183289.2		70571	142364215	NM_183289.2	Tcerg1l	NP_899112.1	ILMN_1212628	006770593	S	2108	CTCCATGCCAAGAGTCATTATACACTCTGAAGAAAGCCGGAATGCTGGGC	7	-	145450601-145450650	7qF4	Mus musculus transcription elongation regulator 1-like (Tcerg1l), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730476P14Rik; MGC130171; MGC130172	5730476P14Rik; MGC130171; MGC130172
Mus musculus	RefSeq	ILMN_259571	ILMN_259571	OLFR899	NM_146479.1	NM_146479.1		258472	33239235	NM_146479.1	Olfr899	NP_666690.1	ILMN_2995190	001300519	S	870	TGTGCTGCCTTTGTTGAATCCGCTCATTTACAGCCTCAGGAATAAGGATG	9	+	38176002-38176051	9qA5.1	Mus musculus olfactory receptor 899 (Olfr899), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC123886; MOR170-8; MGC123887	MGC123886; MOR170-8; MGC123887
Mus musculus	RefSeq	ILMN_198406	ILMN_198406	LOC240549	XM_140634.4	XM_140634.4			38084867	XM_140634.4	LOC240549		ILMN_1227111	003370408	S	555	CCTGTTGGAGGATAAAGAGTACTTAGACCATCAATCTGGCAGGCCCCGGG										
Mus musculus	MEEBO	ILMN_196181	ILMN_196181	ELK3	scl37600.5_524				7305022	NM_013508	Elk3		ILMN_1241681	001470202	S	19	GAAGGCAAGGCACTTTAAATTCAAGATCAGGTGAGCTGAAACACCACTCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210742	ILMN_210742	OLFR1245	NM_146788.1	NM_146788.1		258784	22129276	NM_146788.1	Olfr1245	NP_666999.1	ILMN_2608693	000620382	S	608	CCATGTGTATTGTGATCTTCACCCTCCTCCTAGGCTCCTATGGAATCATC	2	-	89415224-89415273	2qE1	Mus musculus olfactory receptor 1245 (Olfr1245), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-12	MOR231-12
Mus musculus	MEEBO	ILMN_191351	ILMN_191351	2210008N01RIK	scl076579.1_276						2210008N01Rik		ILMN_1214290	000990050	S	1	CAGGCAAGCAGGCTGCGGAGAACTTTGCTGCGTCTTCTAGGAAATTGCAA										
Mus musculus	Riken	ILMN_206731	ILMN_206731	D230013B04RIK	ri|D230013B04|PX00187B20|AK084246|1359					AK084246	D230013B04Rik		ILMN_2582277	004570228	S	1272	TTGTCACAGCTACTCTGAATATAATGGGAGAATGCCTACCCTCCAGCCCA										
Mus musculus	RefSeq	ILMN_219385	ILMN_254258	3930401K13RIK	NM_001079814.1	NM_001079814.1		74022	119392073	NM_001079814.1	3930401K13Rik	NP_001073282.1	ILMN_2708095	006510187	S	2998	AAACCGGTTAGTCAATGTTGTCTTAATATTGTTGACAATTCTGTAAAGTT	16	-	5014299-5014348	16qA1	Mus musculus RIKEN cDNA 3930401K13 gene (3930401K13Rik), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid [goid 6573] [evidence IEA]; The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: 3-hydroxy-2-methylpropanoate + NAD+ = 2-methyl-3-oxopropanoate + NADH + H+ [goid 8442] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+ [goid 4616] [evidence IEA]	2810419J22Rik; Npac; AW545332	2810419J22Rik; Npac; AW545332
Mus musculus	RefSeq	ILMN_212276	ILMN_212276	LASS1	NM_138647.2	NM_138647.2		93898	148747122	NM_138647.2	Lass1	NP_619588.1	ILMN_2751386	001940300	S	535	ATGGACAGCTGGCGTAAGGACTCGGTGGTCATGCTGGTGCATCACGTGGT				8qB3.3	Mus musculus LAG1 homolog, ceramide synthase 1 (Lass1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]	Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]	Uog-1	Uog-1
Mus musculus	RefSeq	ILMN_218630	ILMN_218630	FUSIP1	NM_010178.2	NM_010178.2		14105	122937375	NM_010178.2	Fusip1	NP_034308.1	ILMN_1248565	006020626	S	2651	GGGGGCCCCTGTGGTTTGGGGTAGCTTGTTTTTAGTCTTGTCTATTGTGG	4	+	135425065-135425114	4qD3	Mus musculus FUS interacting protein (serine-arginine rich) 1 (Fusip1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence NAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism [goid 48025] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, or within the cytoplasm of a cell [goid 16482] [evidence IDA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IC ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence NAS]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence NAS]	NSSR2; Nssr; SRrp40; TASR; FUSIP2; NSSR1; TASR2; TASR1	NSSR2; Nssr; SRrp40; TASR; FUSIP2; NSSR1; TASR2; TASR1
Mus musculus	RefSeq	ILMN_221568	ILMN_221568	CXCL12	NM_021704.2	NM_021704.2		20315	60279259	NM_021704.2	Cxcl12	NP_068350.1	ILMN_2737302	001030025	S	485	CTGACTGGGGTCATGCTAAGGTTTGCCAGCATAAAGACACTCCGCCATAG	6	+	117123722-117123771	6qF1	Mus musculus chemokine (C-X-C motif) ligand 12 (Cxcl12), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IDA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	TPAR1; TLSF; Sdf1b; SDF-1; AI174028; Sdf1a; TLSF-b; PBSF/SDF-1; Sdf1; TLSF-a; PBSF; Scyb12	TPAR1; TLSF; Sdf1b; SDF-1; AI174028; Sdf1a; TLSF-b; PBSF/SDF-1; Sdf1; TLSF-a; PBSF; Scyb12
Mus musculus	RefSeq	ILMN_221568	ILMN_221568	CXCL12	NM_021704.2	NM_021704.2		20315	60279259	NM_021704.2	Cxcl12	NP_068350.1	ILMN_2746295	004540484	S	1724	CTTGGAATGAAATTGTATCAACTGTGACATTATATGCACTAGCAATAAAA	6	+	117124961-117125010	6qF1	Mus musculus chemokine (C-X-C motif) ligand 12 (Cxcl12), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IDA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	TPAR1; TLSF; Sdf1b; SDF-1; AI174028; Sdf1a; TLSF-b; PBSF/SDF-1; Sdf1; TLSF-a; PBSF; Scyb12	TPAR1; TLSF; Sdf1b; SDF-1; AI174028; Sdf1a; TLSF-b; PBSF/SDF-1; Sdf1; TLSF-a; PBSF; Scyb12
Mus musculus	RefSeq	ILMN_218771	ILMN_218771	EPM2AIP1	NM_175266.2	NM_175266.2		77781	31341455	NM_175266.2	Epm2aip1	NP_780475.1	ILMN_2895177	001990520	S	3896	GTGTCCACTTCTTTTTATATTCACCTGTGAATGCACCTCTCAGATCAAGG	9	+	111123556-111123605	9qF3	Mus musculus EPM2A (laforin) interacting protein 1 (Epm2aip1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	A930003G21Rik; mKIAA0766	A930003G21Rik; mKIAA0766
Mus musculus	RefSeq	ILMN_199374	ILMN_199374	LOC56628	NM_019909.1	NM_019909.1		56628	9910309	NM_019909.1	LOC56628	NP_064293.1	ILMN_2634603	001710768	S	1415	TGACCTTGATTGTTATCATTGTGACCTAGGGCTGATTTCTTGTTAAGCTT					Mus musculus MHC (A.CA/J(H-2K-f) class I antigen (LOC56628), mRNA.				H2-K	H2-K
Mus musculus	RefSeq	ILMN_221135	ILMN_221135	SERPIND1	NM_008223.2	NM_008223.2		15160	59709438	NM_008223.2	Serpind1	NP_032249.2	ILMN_2731446	005820176	S	1328	CCTGGTGGAGGTCCTTAAGTCCATGGGAATCACAAAGCTCTTCAACAAGA	16	+	17342482-17342531	16qA3	Mus musculus serine (or cysteine) peptidase inhibitor, clade D, member 1 (Serpind1), mRNA.		The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	MGC107662; HCII; AA985900; AI303446; Hcf2	MGC107662; HCII; AA985900; AI303446; Hcf2
Mus musculus	RefSeq	ILMN_190426	ILMN_326432	PPP2R3A	XM_001471965.1	XM_001471965.1		19054	149260531	XM_001471965.1	Ppp2r3a	XP_001472015.1	ILMN_1213816	005570687	S	1800	GCCGAGGAGTACGACTTCCTCGTGGCCGAGGAGGCCATGGCAGAGGACGA					PREDICTED: Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha (Ppp2r3a), mRNA.			Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201480	ILMN_326432	PPP2R3A	XM_001471965.1	XM_001471965.1		19054	149260531	XM_001471965.1	Ppp2r3a	XP_001472015.1	ILMN_1227126	004060736	S	1031	CTTCCTGAGGGCAGCGAAGGACTTCCACTCACGTTACATCACCACAGTGA					PREDICTED: Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha (Ppp2r3a), mRNA.			Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]		
Mus musculus	Riken	ILMN_203655	ILMN_203655	9430041H01RIK	ri|9430041H01|PX00108I18|AK034806|2542					AK034806	9430041H01Rik		ILMN_2558964	005550192	S	1290	GGACGCTGCGACCTTTGTGATCTCTTGCAGCTCTGAAGTTGAAAGTCCTG										
Mus musculus	RefSeq	ILMN_222791	ILMN_222791	AMACR	NM_008537.3	NM_008537.3		17117	46559396	NM_008537.3	Amacr	NP_032563.2	ILMN_2948539	000060672	S	2154	GGCCAGGTCAGAGGTTCATGGTTTCCCCTGCCCAGTGCTGGAGTTCACAT	15	+	10940928-10940977	15qA1	Mus musculus alpha-methylacyl-CoA racemase (Amacr), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8300] [evidence TAS]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (2S)-2-methylacyl-CoA = (2R)-2-methylacyl-CoA [goid 8111] [evidence TAS]	Macr1	Macr1
Mus musculus	RefSeq	ILMN_223706	ILMN_223706	4933421I07RIK	NM_027702.2	NM_027702.2		71162	141803397	NM_027702.2	4933421I07Rik	NP_081978.1	ILMN_1255826	004040546	S	1261	TTCTTTATAGAAAATATCTTATTGTTTTGTTGGGTTCTATTTTTCATATT	7	-	49700894-49700943	7qB3	Mus musculus RIKEN cDNA 4933421I07 gene (4933421I07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194335	ILMN_225850	E130113E03RIK	XM_893895.2	XM_893895.2		319433	94397204	XM_893895.2	E130113E03Rik	XP_898988.1	ILMN_1235043	006860315	S	903	CCTCTGGACCACAAGGCTGAAGAGAGCCAGAATGGATGTGTTTCTCCCCA	14	+	63293267-63293316	14qD1	PREDICTED: Mus musculus RIKEN cDNA E130113E03 gene (E130113E03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194335	ILMN_225850	E130113E03RIK	XM_893895.2	XM_893895.2		319433	94397204	XM_893895.2	E130113E03Rik	XP_898988.1	ILMN_2505503	005270397	S	1240	ATCGGAAGAGTTTCAAATCCCCTTGACTAAAATAGCAGACCTCAAGAATG	14	+	63310918-63310947:63310948-63310967	14qD1	PREDICTED: Mus musculus RIKEN cDNA E130113E03 gene (E130113E03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209888	ILMN_209888	LMAN2	NM_025828.3	NM_025828.3		66890	133892179	NM_025828.3	Lman2	NP_080104.2	ILMN_1252919	000610309	S	3906	TGTTGAGGTGGGTCTTATGGAGTGCTGATGTCATCGCCCCTGCTGTCTCC	13	-	55445553-55445602	13qB1	Mus musculus lectin, mannose-binding 2 (Lman2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	GP36B; 1300009F09Rik; AA408240; AU040819; VIP36; AL023023; 1110003H06Rik	GP36B; 1300009F09Rik; AA408240; AU040819; VIP36; AL023023; 1110003H06Rik
Mus musculus	MEEBO	ILMN_191228	ILMN_191228	4833426J09RIK	scl33438.2.1_25						4833426J09Rik		ILMN_2477276	003370259	S	19	TTTTCTCCTCTGTCAGGTGGCTGTGGCATTGAACTTCAGGAAATGTGTCC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209388	ILMN_209388	CLDN4	NM_009903.1	NM_009903.1		12740	6753439	NM_009903.1	Cldn4	NP_034033.1	ILMN_1223949	005560138	S	1579	TCTGAGTTCCCTCCCTTTGCCCATTTCAAGGACACCGGCCAGTCTGCGGA	5	-	135421157-135421206	5qG2	Mus musculus claudin 4 (Cldn4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	CEP-R; Cpetr1; Cpetr	CEP-R; Cpetr1; Cpetr
Mus musculus	RefSeq	ILMN_197428	ILMN_197428	LOC329488	XM_283774.2	XM_283774.2			38075719	XM_283774.2	LOC329488		ILMN_1227943	000130520	S	1006	AAAGACTTGTGACCTCCAAAGGGCTGCAACTGGATGGCAAGGAGCCAGGC										
Mus musculus	RefSeq	ILMN_213478	ILMN_213478	DBPHT2	NM_198866.2	NM_198866.2		386753	115311549	NM_198866.2	Dbpht2	NP_942566.1	ILMN_2637413	000580397	S	1797	GGCCACTGAACATAAAACACCTGCCGCCTGAGTGGATGGATTCAGCCATG	12	+	75400257-75400306	12qC3	Mus musculus DNA binding protein with his-thr domain (Dbpht2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Spot2	Spot2
Mus musculus	RefSeq	ILMN_209478	ILMN_209478	SLC6A15	NM_175328.2	NM_175328.2		103098	142380198	NM_175328.2	Slc6a15	NP_780537.1	ILMN_1258914	001850170	S	2318	GGCCATACTTCCTGTCCCAGTGGTGTTCATCATTCGTCGCTGCAACCTCA	10	+	102880722-102880771	10qD1	Mus musculus solute carrier family 6 (neurotransmitter transporter), member 15 (Slc6a15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	AA536730; AI326450; v7-3; AI326451	AA536730; AI326450; v7-3; AI326451
Mus musculus	RefSeq	ILMN_209478	ILMN_209478	SLC6A15	NM_175328.2	NM_175328.2		103098	142380198	NM_175328.2	Slc6a15	NP_780537.1	ILMN_1245258	005420564	S	3438	CCTACCAGGACTCTTAAGTGCTGATTTGAAAACTTGAAGCAAGATAGCAT	10	+	102881842-102881891	10qD1	Mus musculus solute carrier family 6 (neurotransmitter transporter), member 15 (Slc6a15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	AA536730; AI326450; v7-3; AI326451	AA536730; AI326450; v7-3; AI326451
Mus musculus	RefSeq	ILMN_190420	ILMN_209478	SLC6A15	NM_175328.2	NM_175328.2		103098	142380198	NM_175328.2	Slc6a15	NP_780537.1	ILMN_2689230	001990612	S	230	CCGCACCATCTGCTGGATCCGACCCTTTTTCGACCTAGGAACCTGGAAGC	10	+	102830706-102830755	10qD1	Mus musculus solute carrier family 6 (neurotransmitter transporter), member 15 (Slc6a15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	AA536730; AI326450; v7-3; AI326451	AA536730; AI326450; v7-3; AI326451
Mus musculus	RefSeq	ILMN_217374	ILMN_217374	NEGR1	NM_177274.3	NM_177274.3		320840	141803374	NM_177274.3	Negr1	NP_796248.1	ILMN_1249071	006450736	S	1760	CCTTTAGACCATTGTAGCTTCCAAGTAAAGAAGGGGGAAGTATGGCAGGG	3	+	156834458-156834507	3qH4	Mus musculus neuronal growth regulator 1 (Negr1), transcript variant 2, mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA3001; 5330422G01Rik; KILON; Ntra	mKIAA3001; 5330422G01Rik; KILON; Ntra
Mus musculus	RefSeq	ILMN_186164	ILMN_186164	ZFP513	NM_175311.3	NM_175311.3		101023	40254295	NM_175311.3	Zfp513	NP_780520.2	ILMN_2461853	003780520	S	190	ACGATGCCCCGAAGGAAGCAAAGCCATCCACAGCCCGTGAAATGCGAGGG	5	-	31504367-31504416	5qB1	Mus musculus zinc finger protein 513 (Zfp513), mRNA.				D430028M17Rik; AW990386	D430028M17Rik; AW990386
Mus musculus	RefSeq	ILMN_186164	ILMN_186164	ZFP513	NM_175311.3	NM_175311.3		101023	40254295	NM_175311.3	Zfp513	NP_780520.2	ILMN_2936604	000240291	S	1905	CTTTCTCCCCCGCTGGTCAGGGGCTCCACACAGACTAACCTAGGCACTAT	5	-	31501557-31501606	5qB1	Mus musculus zinc finger protein 513 (Zfp513), mRNA.				D430028M17Rik; AW990386	D430028M17Rik; AW990386
Mus musculus	RefSeq	ILMN_186164	ILMN_186164	ZFP513	NM_175311.3	NM_175311.3		101023	40254295	NM_175311.3	Zfp513	NP_780520.2	ILMN_1257753	006130017	S	10	GTCACGATGCCCCGAAGGAAGCAAAGCCATCCACAGCCCGTGAAATGCGA	5	-	31504547-31504596	5qB1	Mus musculus zinc finger protein 513 (Zfp513), mRNA.				D430028M17Rik; AW990386	D430028M17Rik; AW990386
Mus musculus	RefSeq	ILMN_237291	ILMN_237291	STK40	NM_028800.2	NM_028800.2		74178	31560066	NM_028800.2	Stk40	NP_083076.2	ILMN_2793844	002030632	S	3012	TTGATAGCGATAAGTCTCCGAAGGGAGTGGAAATGCAGTCAGCCTGGGCC	4	+	125817819-125817868	4qD2.2	Mus musculus serine/threonine kinase 40 (Stk40), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2310004N11Rik; AI428792	2310004N11Rik; AI428792
Mus musculus	MEEBO	ILMN_191247	ILMN_191247	4930442P07RIK	scl8592.1.1_63						4930442P07Rik		ILMN_2477448	006660577	S	12	GTGCAAGCTTCCCCTAATAGTCACCTATTTATTATCCTTGAGGGGCCGAC										
Mus musculus	RefSeq	ILMN_226072	ILMN_226072	KBTBD7	NM_001024135.1	NM_001024135.1		211255	67625734	NM_001024135.1	Kbtbd7	NP_001019306.1	ILMN_3156633	001850019	A	4189	CCCTGTTTGGGGGCCAACTTTTTCTTCCCCACTAACTTCTGTTGATAGCC	14	+	79830506-79830555	14qD3	Mus musculus kelch repeat and BTB (POZ) domain containing 7 (Kbtbd7), mRNA.				AU045792; Gm295; 1110008P08Rik	AU045792; Gm295; 1110008P08Rik
Mus musculus	RefSeq	ILMN_226072	ILMN_226072	KBTBD7	NM_001024135.1	NM_001024135.1		211255	67625734	NM_001024135.1	Kbtbd7	NP_001019306.1	ILMN_3077630	001570403	I	1294	TTTGGGCACCCCCGAGATCCATTTCTCTGTTACGACCCTTATTCCGGAGA	14	+	79827611-79827660	14qD3	Mus musculus kelch repeat and BTB (POZ) domain containing 7 (Kbtbd7), mRNA.				AU045792; Gm295; 1110008P08Rik	AU045792; Gm295; 1110008P08Rik
Mus musculus	RefSeq	ILMN_195547	ILMN_226072	KBTBD7	NM_001024135.1	NM_001024135.1		211255	67625734	NM_001024135.1	Kbtbd7	NP_001019306.1	ILMN_2516565	003290202	S	4264	GGCAATGCTTGTCACAACCCGATTATTCATCTGCACAATTAAGGTCTGCA	14	+	79830581-79830630	14qD3	Mus musculus kelch repeat and BTB (POZ) domain containing 7 (Kbtbd7), mRNA.				AU045792; Gm295; 1110008P08Rik	AU045792; Gm295; 1110008P08Rik
Mus musculus	MEEBO	ILMN_217967	ILMN_217967	F13B	scl17393.13.1_260				13624320	NM_031164	F13b		ILMN_2774206	004480408	S	2250	CCCCTGTTTTCAATCGATCGCTGTCAGACTATATTGTTTCCTTGAGTATG							The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]			
Mus musculus	RefSeq	ILMN_214814	ILMN_260127	HORMAD1	NM_026489.2	NM_026489.2		67981	141802480	NM_026489.2	Hormad1	NP_080765.1	ILMN_1257752	006270605	S	1019	GTCAGTAAAACATCTGAACTTGATGTGTCTGAAAGCAAAACAAGAAGCGG	3	+	95385441-95385490	3qF2.1	Mus musculus HORMA domain containing 1 (Hormad1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nohma; 4921522K05Rik	Nohma; 4921522K05Rik
Mus musculus	Riken	ILMN_203167	ILMN_203167	CP	ri|9230118I10|PX00062D17|AK033842|1541					AK033842	Cp		ILMN_2555238	000540121	S	859	GACGCTAGCTTGTGCCAAGTGACTCCTAAAAATGTCTTGACAGCCCAAGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O [goid 4322] [evidence IDA]		
Mus musculus	MEEBO	ILMN_187052	ILMN_187052	WBSCR14	scl27137.17_357	NM_021455.2			34328262	NM_021455.2	Wbscr14		ILMN_1259035	005900168	S	13	CAGAGCTGCCAGCAGTGAAAGGTGACATAGAAGACCGATCCTGTGGGTTA										
Mus musculus	RefSeq	ILMN_196993	ILMN_245493	A530032D15RIK	NM_213615.2	NM_213615.2		381287	126215537	NM_213615.2	A530032D15Rik	NP_998780.2	ILMN_1238357	005860053	S	1121	GCCTGGAACCCACAGAGATCTGCTTGCCTCTTGTTTCCTGAATAGTGGGA	1	-	85085303-85085352	1qC5	Mus musculus RIKEN cDNA A530032D15Rik gene (A530032D15Rik), mRNA.				MGC130186; MGC130185; Gm1888	MGC130186; MGC130185; Gm1888
Mus musculus	RefSeq	ILMN_245493	ILMN_245493	A530032D15RIK	NM_213615.2	NM_213615.2		381287	126215537	NM_213615.2	A530032D15Rik	NP_998780.2	ILMN_2892518	001410600	S	1487	CAGAACATGACCTTGAAGCTGACAAGATTTTCTGTGCCTTTCGTTGCCCC	1	-	85084937-85084986	1qC5	Mus musculus RIKEN cDNA A530032D15Rik gene (A530032D15Rik), mRNA.				MGC130186; MGC130185; Gm1888	MGC130186; MGC130185; Gm1888
Mus musculus	RefSeq	ILMN_209882	ILMN_209882	GTPBP2	NM_019581.2	NM_019581.2		56055	31980943	NM_019581.2	Gtpbp2	NP_062527.1	ILMN_2600113	003850142	S	2787	GCCCGCCTTGCCCTTTGTTAGCTTCCTGGGTTCCCATGAACTCAGGGATT	17	+	46303647-46303696	17qC	Mus musculus GTP binding protein 2 (Gtpbp2), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]		
Mus musculus	RefSeq	ILMN_221227	ILMN_318532	LOC100044934	XR_031569.1	XR_031569.1		100044934	149262265	XR_031569.1	LOC100044934		ILMN_2732747	004880452	S	2959	GGGTCCTCCCAAAGTGTCAGTTCTGCTAAGGATCACAGCAGTGCCAATGA					PREDICTED: Mus musculus similar to cardiomyopathy associated 4 (LOC100044934), misc RNA.					
Mus musculus	RefSeq	ILMN_186018	ILMN_318532	LOC100044934	XR_031569.1	XR_031569.1		100044934	149262265	XR_031569.1	LOC100044934		ILMN_1221891	003850475	S	2708	CCGGTGCTGCACGGACAACTGGTCATGCAGGCAAAGCCGCTGTAGGATCT					PREDICTED: Mus musculus similar to cardiomyopathy associated 4 (LOC100044934), misc RNA.					
Mus musculus	RefSeq	ILMN_223312	ILMN_223312	MAPK4	NM_172632.2	NM_172632.2		225724	89337267	NM_172632.2	Mapk4	NP_766220.2	ILMN_1226868	003400059	S	3984	CCCACCCTGGTAGCTTAAGTTAAGACAGACTTGGAGTCAGTCCAAAGCCC	18	-	74088720-74088769	18qE2	Mus musculus mitogen-activated protein kinase 4 (Mapk4), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	p63Mapk; Prkm4; A330097D03Rik; Erk3	p63Mapk; Prkm4; A330097D03Rik; Erk3
Mus musculus	RefSeq	ILMN_213208	ILMN_213208	TXNL4A	NM_178604.3	NM_178604.3		27366	109255209	NM_178604.3	Txnl4a	NP_848719.2	ILMN_3114365	002510593	A	258	CGTACATGCTTCCGCATCTGCACAATGGCTGGCAGGTAGACCAGGCCATC	18	+	80403934-80403983	18qE3	Mus musculus thioredoxin-like 4A (Txnl4a), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Ribonucleoprotein complex containing small nuclear RNA U5; a component of both the major and minor spliceosome complexes [goid 5682] [evidence TAS]; Ribonucleoprotein complex containing small nuclear RNA U5; a component of both the major and minor spliceosome complexes [goid 5682] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	U5-15kDa; U5-15kD; D18Wsu98e; Dim1	U5-15kDa; U5-15kD; D18Wsu98e; Dim1
Mus musculus	RefSeq	ILMN_212169	ILMN_212169	NID1	NM_010917.1	NM_010917.1		18073	6754853	NM_010917.1	Nid1	NP_035047.1	ILMN_2814005	004010292	S	5562	CCCCAACCCTATCTCCTACCTCCACCTCGACCTGCTTACATTGGACTGGG	13	+	13604147-13604196	13qA1	Mus musculus nidogen 1 (Nid1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence TAS]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IPI]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The process whose specific outcome is the progression of the glomerular basement membrane over time, from its formation to the mature structure. The glomerular basement membrane is the basal laminal portion of the glomerulus which performs the actual filtration [goid 32836] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	A630025O17; Nid; nidogen-1; entactin; entactin-1	A630025O17; Nid; nidogen-1; entactin; entactin-1
Mus musculus	RefSeq	ILMN_213765	ILMN_227241	1700007B14RIK	XM_899560.3	XM_899560.3		71831	149258941	XM_899560.3	1700007B14Rik	XP_904653.1	ILMN_1237764	001580646	S	1510	GCTGAAATACTTCAACGACTGTGGTCATTTCCCCACCCAGACCCAGATCG	8	+	78286932-78286981	8qC1	PREDICTED: Mus musculus RIKEN cDNA 1700007B14 gene, transcript variant 2 (1700007B14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_256023	ILMN_256023	OLFR1404	NM_146881.1	NM_146881.1		258881	22203800	NM_146881.1	Olfr1404	NP_667092.1	ILMN_2920318	001780228	S	792	GTCCCAGAGCTTGCTGGGGCAGGAAAGACTCATCTCAGTGACCTACACTC	1	+	175146575-175146624	1qH3	Mus musculus olfactory receptor 1404 (Olfr1404), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-2	MOR267-2
Mus musculus	RefSeq	ILMN_191639	ILMN_191639	IKZF5	NM_175115.4	NM_175115.4		67143	40254391	NM_175115.4	Ikzf5	NP_780324.2	ILMN_1215504	000270022	S	3724	GTTGAGAAAAGTTGACCATGCACTATTTATAGTACTTTGCCATAACAGGC	7	-	138532779-138532828	7qF3	Mus musculus IKAROS family zinc finger 5 (Ikzf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PEGASUS; Zfpn1a5; 2610034F18Rik; MGC106439	PEGASUS; Zfpn1a5; 2610034F18Rik; MGC106439
Mus musculus	RefSeq	ILMN_191639	ILMN_191639	IKZF5	NM_175115.4	NM_175115.4		67143	40254391	NM_175115.4	Ikzf5	NP_780324.2	ILMN_2963412	005290215	S	4104	TCCCTGCTAAAGACATTTTTGTTAGTCTTAGGGGGTAGGTATTTGCTTTC	7	-	138532399-138532448	7qF3	Mus musculus IKAROS family zinc finger 5 (Ikzf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PEGASUS; Zfpn1a5; 2610034F18Rik; MGC106439	PEGASUS; Zfpn1a5; 2610034F18Rik; MGC106439
Mus musculus	RefSeq	ILMN_221118	ILMN_228335	CD8A	NM_001081110.2	NM_001081110.2		12525	126722839	NM_001081110.2	Cd8a	NP_001074579.1	ILMN_2731282	006100152	S	3072	TATCCATTTAGTATTAAATTGTTTCAAACTTCCCCCTACTATTACACTAC	6	+	71329107-71329156	6qC1	Mus musculus CD8 antigen, alpha chain (Cd8a), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process involved in the carrying out of an immune response by a T cell [goid 2456] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; The process whereby a relatively unspecialized T cell acquires specialized features of a cytotoxic T cell [goid 45065] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	Ly-35; Ly-2; BB154331; Lyt-2; Ly-B	Ly-35; Ly-2; BB154331; Lyt-2; Ly-B
Mus musculus	RefSeq	ILMN_228335	ILMN_228335	CD8A	NM_001081110.2	NM_001081110.2		12525	126722839	NM_001081110.2	Cd8a	NP_001074579.1	ILMN_2935080	002060091	S	2219	GGGCTTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTTACAATAGGGT	6	+	71328254-71328303	6qC1	Mus musculus CD8 antigen, alpha chain (Cd8a), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process involved in the carrying out of an immune response by a T cell [goid 2456] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; The process whereby a relatively unspecialized T cell acquires specialized features of a cytotoxic T cell [goid 45065] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	Ly-35; Ly-2; BB154331; Lyt-2; Ly-B	Ly-35; Ly-2; BB154331; Lyt-2; Ly-B
Mus musculus	RefSeq	ILMN_189197	ILMN_189197	FIS1	NM_025562.1	NM_025562.1		66437	13384997	NM_025562.1	Fis1	NP_079838.1	ILMN_2939295	001190670	S	310	CGGGACTATGTCTTCTACCTGGCCGTGGGCAACTACCGGCTCAAGGAATA	5	+	137249753-137249796:137250192-137250197	5qG2	Mus musculus fission 1 (mitochondrial outer membrane) homolog (yeast) (Fis1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2010003O14Rik; Ttc11	2010003O14Rik; Ttc11
Mus musculus	RefSeq	ILMN_189197	ILMN_189197	FIS1	NM_025562.1	NM_025562.1		66437	13384997	NM_025562.1	Fis1	NP_079838.1	ILMN_2939294	004890750	S	391	TTGCAGACTGAGCCCCAGAACAACCAGGCCAAGGAGCTGGAACGCCTGAT	5	+	137250229-137250278	5qG2	Mus musculus fission 1 (mitochondrial outer membrane) homolog (yeast) (Fis1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2010003O14Rik; Ttc11	2010003O14Rik; Ttc11
Mus musculus	RefSeq	ILMN_189411	ILMN_233661	LDLR	NM_010700.2	NM_010700.2		16835	113195699	NM_010700.2	Ldlr	NP_034830.2	ILMN_1221255	001070204	S	2660	GACAACCCAGTCTACCAGAAGACCACAGAGGACGAGCTCCACATTTGCCG	9	+	21551673-21551722	9qA3	Mus musculus low density lipoprotein receptor (Ldlr), mRNA. XM_979210 XM_979251	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42159] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42159] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42159] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IGI]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IGI]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with low-density lipoprotein, one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 30169] [evidence IDA]; Combining with a very-low-density lipoprotein to initiate a change in cell activity [goid 30229] [evidence IDA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IMP]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IDA]	Hlb301	Hlb301
Mus musculus	RefSeq	ILMN_190580	ILMN_227314	BC038156	NM_177768.2	NM_177768.2		270135	31343068	NM_177768.2	BC038156	NP_808436.1	ILMN_2731424	001410142	S	3526	AGCAGTTCCATGGAGGGCTGTCCCCTGTTCTCCACCGCTCTCCTACAACA	9	+	30882712-30882761	9qA4	Mus musculus cDNA sequence BC038156 (BC038156), mRNA.				E230011F09	E230011F09
Mus musculus	RefSeq	ILMN_218674	ILMN_218674	SART1	NM_016882.3	NM_016882.3		20227	124244095	NM_016882.3	Sart1	NP_058578.3	ILMN_1254793	001510408	S	1973	ATCCTGGATGAGGAGCCCATCGTGAACAGAGGGCTGGCTGCTGCCCTGCT	19	-	5381682-5381731	19qA	Mus musculus squamous cell carcinoma antigen recognized by T-cells 1 (Sart1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		U5-110K	U5-110K
Mus musculus	RefSeq	ILMN_211268	ILMN_211268	ACBD3	NM_133225.2	NM_133225.2		170760	142364602	NM_133225.2	Acbd3	NP_573488.1	ILMN_1235783	004250156	S	3260	CCTTGTTCTTGGGAGCAGTGAATGTCACTTTACATGGCTGTTTCTGTCAC	1	+	182684124-182684173	1qH4	Mus musculus acyl-Coenzyme A binding domain containing 3 (Acbd3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]	GOLPH1; Gocap1; D1Ertd10e; 8430407O11Rik; 60kDa; Pap7; GCP60	GOLPH1; Gocap1; D1Ertd10e; 8430407O11Rik; 60kDa; Pap7; GCP60
Mus musculus	MEEBO	ILMN_192952	ILMN_192952	SCL0002779.1_2	scl0002779.1_2	AK006588.1			12839763	AK006588.1	scl0002779.1_2		ILMN_2492881	006580026	S	17	TGGGCAGTCAATGGTACTGGACGTGCTGGAAAGACTCACGGAGAAATAGG										
Mus musculus	RefSeq	ILMN_222246	ILMN_222246	MGAT4A	NM_173870.1	NM_173870.1		269181	33239361	NM_173870.1	Mgat4a	NP_776295.1	ILMN_2746842	005310240	S	1627	CGTCCTTTCTTATGACTCTTGATTAAAGATAATTAGCGCGTCCTCTTCTG	1	-	37501435-37501484	1qB	Mus musculus mannoside acetylglucosaminyltransferase 4, isoenzyme A (Mgat4a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + (N-acetyl-beta-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R [goid 8454] [evidence IEA]	GnT-IVa	GnT-IVa
Mus musculus	MEEBO	ILMN_215139	ILMN_215139	1700006A11RIK	scl21555.12.1_26	XM_131185.2			38077055	XM_131185.2	1700006A11Rik		ILMN_2655962	006770687	S	1919	TTTTTTCTCAGCAACTGAATACTTGAATCCCCAGGACTACATTGAATTCC										
Mus musculus	RefSeq	ILMN_219574	ILMN_219574	SLC2A12	NM_178934.3	NM_178934.3		353169	142387928	NM_178934.3	Slc2a12	NP_849265.1	ILMN_2710688	001450634	S	3416	TTTGTTTGTGTATTCCTTGTGAATGGGCAAAAATAAGCAAATGTAGCTTA	10	+	22423460-22423509	10qA3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 12 (Slc2a12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	GLUT-12; Glut12	GLUT-12; Glut12
Mus musculus	RefSeq	ILMN_219301	ILMN_219301	UTP3	NM_023054.1	NM_023054.1		65961	12746429	NM_023054.1	Utp3	NP_075541.1	ILMN_2706987	005890253	S	1274	GAAGAGAAAGAAGGAAGAAAACAGTGCTGAAGAACAGGCTCTCGAAGAAC	5	+	88984781-88984830	5qE1	Mus musculus UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae (Utp3), mRNA.	A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins [goid 32040] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW557551; Sas10; C87704; 2400011K09Rik	AW557551; Sas10; C87704; 2400011K09Rik
Mus musculus	RefSeq	ILMN_200328	ILMN_200328	LOC386241	XM_359135.1	XM_359135.1			38081326	XM_359135.1	LOC386241		ILMN_1253782	005820706	S	532	CTCAAGGCTTTCTTGTTAGAGAAGGGCTCCCTTAAGGAGATGGTCCAGGG										
Mus musculus	RefSeq	ILMN_217640	ILMN_233534	BANF1	NM_001038231.1	NM_001038231.1		23825	84042520	NM_001038231.1	Banf1	NP_001033320.1	ILMN_2698392	002750092	S	491	TGTACTCCAGGGTCTATGGGGAGTTCTCTCCCCTCAGCGTTTCAATCTTT	19	-	5364842-5364891	19qA	Mus musculus barrier to autointegration factor 1 (Banf1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The molecular events that lead to the integration of a viral genome into the host genome [goid 19047] [evidence TAS]; The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]	Bcrp1; Baf; L2bp1/Baf; C78287	Bcrp1; Baf; L2bp1/Baf; C78287
Mus musculus	RefSeq	ILMN_233534	ILMN_233534	BANF1	NM_001038231.1	NM_001038231.1		23825	84042520	NM_001038231.1	Banf1	NP_001033320.1	ILMN_3158909	003420255	A	464	GATGGCTGTTGTCACCCTCACCTCCTATGTACTCCAGGGTCTATGGGGAG	19	-	5364869-5364918	19qA	Mus musculus barrier to autointegration factor 1 (Banf1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The molecular events that lead to the integration of a viral genome into the host genome [goid 19047] [evidence TAS]; The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]	Bcrp1; Baf; L2bp1/Baf; C78287	Bcrp1; Baf; L2bp1/Baf; C78287
Mus musculus	RefSeq	ILMN_229535	ILMN_229535	GM114	NM_001033298.1	NM_001033298.1		228730	85701799	NM_001033298.1	Gm114	NP_001028470.1	ILMN_2828492	006550465	S	1716	CCCAGGCACAGGACACAGAGAGGCGGATCTAGTACCCTCAGAACTGTTTC	2	+	146634411-146634420:146641964-146642003	2qG2	Mus musculus gene model 114, (NCBI) (Gm114), mRNA. XM_925684 XM_925685					
Mus musculus	MEEBO	ILMN_184544	ILMN_184544	2010309L07RIK	scl7952.1.1_18						2010309L07Rik		ILMN_1239234	007570372	S	19	GAGACAAACTGTAGCTGGCCGTCTTGATTAAAGCCAAGTGGTCCCTGTGG										
Mus musculus	Riken	ILMN_203966	ILMN_203966	A430096B05RIK	ri|A430096B05|PX00140E19|AK040441|4630					AK040441	A430096B05Rik		ILMN_2561342	007560014	S	3975	GGAGCCAACCTAACTACCTTTGATGGAGCTCACAATGCCATCAGCTCCCC										
Mus musculus	RefSeq	ILMN_222987	ILMN_222987	BC018242	NM_144935.1	NM_144935.1		235044	21450346	NM_144935.1	BC018242	NP_659184.1	ILMN_2757716	002490600	S	2006	GGGTGCTACTGTGGCCGGTGTTCAAGTGTCTAAACAGCCAATAAGAGCCC	9	+	21752749-21752798	9qA3	Mus musculus cDNA sequence BC018242 (BC018242), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]	PRG-4; MGC25492	PRG-4; MGC25492
Mus musculus	RefSeq	ILMN_222987	ILMN_222987	BC018242	NM_144935.1	NM_144935.1		235044	21450346	NM_144935.1	BC018242	NP_659184.1	ILMN_2850073	000630228	S	2384	TATTACTAGGGCTGTGGAAAATGACTTTATTTTCTCGGGACCCACCCTTC	9	+	21753127-21753176	9qA3	Mus musculus cDNA sequence BC018242 (BC018242), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]	PRG-4; MGC25492	PRG-4; MGC25492
Mus musculus	RefSeq	ILMN_196744	ILMN_244575	LOC667769	XR_002073.2	XR_002073.2		667769	149255344	XR_002073.2	LOC667769		ILMN_2613073	003390753	S	686	TTAAGTCTAGAGGATGTGTATTTTTATCTAAAGCAAGAATAGAAGATACT	6	-	130032994-130033043	6qF3	PREDICTED: Mus musculus similar to killer cell lectin-like receptor subfamily A member 29 (LOC667769), misc RNA.					
Mus musculus	RefSeq	ILMN_208825	ILMN_208825	TBRG4	NM_134011.1	NM_134011.1		21379	20589520	NM_134011.1	Tbrg4	NP_598772.1	ILMN_2589893	006660500	S	2201	GGTCAGAGTAGGGGGTGCTCAGCATCTCCAAGGAACGGGTGGTCCTAATA	11	-	6516445-6516494	11qA1	Mus musculus transforming growth factor beta regulated gene 4 (Tbrg4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Cpr2; TB-12; AA408001; mKIAA0948; AI527316; AA120735; R74877; 2310042P22Rik	Cpr2; TB-12; AA408001; mKIAA0948; AI527316; AA120735; R74877; 2310042P22Rik
Mus musculus	RefSeq	ILMN_208825	ILMN_208825	TBRG4	NM_134011.1	NM_134011.1		21379	20589520	NM_134011.1	Tbrg4	NP_598772.1	ILMN_2670230	002000445	S	1168	TGGAGAGGTGGCCCGCTGCGCCAAGTCCTTTGCCTTCCTCAAGTGGCTCA	11	-	6519587-6519636	11qA1	Mus musculus transforming growth factor beta regulated gene 4 (Tbrg4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Cpr2; TB-12; AA408001; mKIAA0948; AI527316; AA120735; R74877; 2310042P22Rik	Cpr2; TB-12; AA408001; mKIAA0948; AI527316; AA120735; R74877; 2310042P22Rik
Mus musculus	Riken	ILMN_202996	ILMN_202996	PLXN2	ri|4732473L10|PX00052B09|AK028948|3953					AK028948	Plxn2		ILMN_1226892	006770315	S	3358	TCTTGAGTGTCTCTGTCAGCAGGGACTTCCAAAGGCCAGCTGCTCCAGCC										
Mus musculus	Riken	ILMN_207114	ILMN_207114	PTPRK	ri|7120449H18|PX00650I10|AK078614|1571					AK078614	Ptprk		ILMN_2585145	004640612	S	1160	AACCTTTGGGTGGTTTTCCTTGGAATGCTCAATCTGATAGTGATGGAAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	Riken	ILMN_205501	ILMN_205501	D130032J17RIK	ri|D130032J17|PX00184A05|AK051309|1879					AK051309	D130032J17Rik		ILMN_2573036	001850474	S	1499	CACAGATGGTATAGCCACACAGTGTCCACATCCCAGTTTTCTATCCCCTG										
Mus musculus	RefSeq	ILMN_193457	ILMN_243526	TNKS1BP1	NM_001081260.1	NM_001081260.1		228140	124486922	NM_001081260.1	Tnks1bp1	NP_001074729.1	ILMN_1257163	006420114	S	5363	GTATCACCGTCCCAACTTCTTGCACCCCTTCAGCCCCCAACTGGATTCCC	2	+	84912900-84912949	2qD	Mus musculus tankyrase 1 binding protein 1 (Tnks1bp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]			mKIAA1741; TAB182	mKIAA1741; TAB182
Mus musculus	RefSeq	ILMN_221565	ILMN_221565	CIDEA	NM_007702.1	NM_007702.1		12683	6680943	NM_007702.1	Cidea	NP_031728.1	ILMN_1215446	003780021	S	762	GACGGGACAGTTCCTGGTCTATGCGGGCACATACATGCTCCGAGTACTGG	18	+	67518711-67518711:67519750-67519798	18qE1	Mus musculus cell death-inducing DNA fragmentation factor, alpha subunit-like effector A (Cidea), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IMP]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IMP]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IDA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IDA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	AW212747	AW212747
Mus musculus	RefSeq	ILMN_209785	ILMN_209785	SIGLECE	NM_031181.2	NM_031181.2		83382	134032001	NM_031181.2	Siglece	NP_112458.2	ILMN_1251152	004220343	S	583	CCTGGACTGGTACCTCTGTGTCATTTTTGAGCACCAACACTACGGGTTCC	7	-	50914694-50914743	7qB4	Mus musculus sialic acid binding Ig-like lectin E (Siglece), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA];  [goid 5057] [evidence IPI]; Interacting selectively with any monosaccharide. Monosaccharides are the simplest carbohydrates; they are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H[CHOH]nC(=O)[CHOH]mH with three or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides [goid 48029] [evidence IDA]	Siglec9; mSiglec-E; Siglec5; Cd170; Siglecl1	Siglec9; mSiglec-E; Siglec5; Cd170; Siglecl1
Mus musculus	RefSeq	ILMN_209785	ILMN_209785	SIGLECE	NM_031181.2	NM_031181.2		83382	134032001	NM_031181.2	Siglece	NP_112458.2	ILMN_2599192	005870050	S	319	TCTTCCTGCTCGGAGACCCTTGGAGGAATGACTGCTCCCTGAACATCAGA	7	-	50915163-50915212	7qB4	Mus musculus sialic acid binding Ig-like lectin E (Siglece), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA];  [goid 5057] [evidence IPI]; Interacting selectively with any monosaccharide. Monosaccharides are the simplest carbohydrates; they are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H[CHOH]nC(=O)[CHOH]mH with three or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides [goid 48029] [evidence IDA]	Siglec9; mSiglec-E; Siglec5; Cd170; Siglecl1	Siglec9; mSiglec-E; Siglec5; Cd170; Siglecl1
Mus musculus	RefSeq	ILMN_199360	ILMN_199360	LOC386420	XM_359220.1	XM_359220.1			38081570	XM_359220.1	LOC386420		ILMN_2534970	001260670	S	474	GCTAGAGCATGAGGGCACTTGGGATCAACCACAGGGTGTTTCTCAGGATG										
Mus musculus	RefSeq	ILMN_213018	ILMN_213018	GJA3	NM_016975.2	NM_016975.2		14611	59710096	NM_016975.2	Gja3	NP_058671.2	ILMN_2632678	006860743	S	873	GAGTTACTAACCACTTCAACCCAGATGCCTCAGAAGCCAGGCACAAGCCC	14	-	57654985-57655034	14qC3	Mus musculus gap junction protein, alpha 3 (Gja3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]		Cx43; Cx46; Gja-3; Cnx46	Cx43; Cx46; Gja-3; Cnx46
Mus musculus	MEEBO	ILMN_193434	ILMN_193434	5430439C17RIK	scl071403.1_200						5430439C17Rik		ILMN_1232227	003850243	S	1	TCCAGTGATTATTTTGTTAAAGGCAAAGGGGTCATGTGATGTACTAAATG										
Mus musculus	RefSeq	ILMN_209474	ILMN_209474	GATA6	NM_010258.3	NM_010258.3		14465	95113656	NM_010258.3	Gata6	NP_034388.2	ILMN_2868133	006350678	S	3046	GTATCTGTAACACTCTTGACGCCTGTACCACGTGACCAACCCACAGGTTG	18	+	11085485-11085534	18qA1	Mus musculus GATA binding protein 6 (Gata6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]	AA410133; GATA-6	AA410133; GATA-6
Mus musculus	RefSeq	ILMN_200954	ILMN_200954	LOC385516	XM_358265.1	XM_358265.1			38087331	XM_358265.1	LOC385516		ILMN_2540593	004730020	S	60	CAACAAGTTAGAGAAGGGGAAGTCAGGCAATAAGGTTGGGTGTTCTAGTG										
Mus musculus	Riken	ILMN_207180	ILMN_207180	F830036K18RIK	ri|F830036K18|PL00007O07|AK089878|2789					AK089878	F830036K18Rik		ILMN_2585651	002710273	S	2736	GGTGGGATTCAATGTAGCTGACCTTAGCTGAAATGCCCAACAATGGGGAG										
Mus musculus	RefSeq	ILMN_208715	ILMN_208715	THAP11	NM_021513.1	NM_021513.1		59016	10946933	NM_021513.1	Thap11	NP_067488.1	ILMN_2588832	006760653	S	1663	GGTGACTTGCTGATGGAGATCCAGCTCACCAGGGACTTAGGTTTATCTCG	8	+	108380705-108380754	8qD3	Mus musculus THAP domain containing 11 (Thap11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	CTG-B43a; AB041579; CTG-B45d	CTG-B43a; AB041579; CTG-B45d
Mus musculus	RefSeq	ILMN_247531	ILMN_247531	ZFP457	NM_001003666.2	NM_001003666.2		431706	110665713	NM_001003666.2	Zfp457	NP_001003666.2	ILMN_2827267	006420563	S	1554	ACCCTACAAGTGTGAAGTATGTGGCAAGGCCTTCAATATCCCATCAAAAC	13	-	67393899-67393948	13qB3	Mus musculus zinc finger protein 457 (Zfp457), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rslcan-6	Rslcan-6
Mus musculus	Riken	ILMN_201915	ILMN_201915	4933427L07RIK	ri|4933427L07|PX00021E05|AK016957|1468					AK016957	4933427L07Rik		ILMN_1236178	000610575	S	1231	CCAAGCAAGAGTGGAGTGTTAACCACAGCGAGGACACAGCAAGGACTCAC										
Mus musculus	RefSeq	ILMN_192532	ILMN_192532	TSTA3	NM_031201.1	NM_031201.1		22122	13654267	NM_031201.1	Tsta3	NP_112478.1	ILMN_1221145	002630554	S	1243	GCTTGTCTGCTTCTGCCCAACCTCCATGTGTCCCTGCTGGACTAGAAACC	15	-	75755132-75755181	15qD3	Mus musculus tissue specific transplantation antigen P35B (Tsta3), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IMP]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IMP]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: GDP-L-fucose + NAD+ = GDP-4-dehydro-6-deoxy-D-mannose + NADH + H+ [goid 50577] [evidence IEA]	FX; Tstap35b; MGC113801; AI256181	FX; Tstap35b; MGC113801; AI256181
Mus musculus	RefSeq	ILMN_210959	ILMN_210959	PMM1	NM_013872.2	NM_013872.2		29858	142368246	NM_013872.2	Pmm1	NP_038900.1	ILMN_2611027	006380372	S	645	GCTGGGATAAGCGCTACTGCCTGGACAGCCTGGATGAAGACAGCTTTGAC	15	-	81782388-81782437	15qE1	Mus musculus phosphomannomutase 1 (Pmm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose [goid 19307] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-mannose 1-phosphate = D-mannose 6-phosphate [goid 4615] [evidence IEA]	C77612	C77612
Mus musculus	RefSeq	ILMN_197114	ILMN_197114	LOC195418	XM_110848.2	XM_110848.2			38074140	XM_110848.2	LOC195418		ILMN_1239106	007050451	S	198	AAAAGACGGTGCAAACAAGGATGGCTCTGTGGTGGTTCCTTTGCACAGCC										
Mus musculus	RefSeq	ILMN_213305	ILMN_213305	GSX1	NM_008178.2	NM_008178.2		14842	118130916	NM_008178.2	Gsx1	NP_032204.1	ILMN_2635818	001240438	S	1594	CAATACGCTCTAAACCCCCTTCAAATGAAGCCGCTGTAACCAACCTCTCC	5	+	148002344-148002393	5qG3	Mus musculus GS homeobox 1 (Gsx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IGI]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IMP]; The progression of the hypothalamus region of the forebrain, from its initial formation to its mature state [goid 21854] [evidence IMP]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21527] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]	Gsh-1; Gsh1	Gsh-1; Gsh1
Mus musculus	RefSeq	ILMN_214412	ILMN_238988	ABCB7	XM_907304.2	XM_907304.2		11306	94408008	XM_907304.2	Abcb7	XP_912397.1	ILMN_2647744	004490187	S	5576	GCCAAGCATTTACCTTAGCACAGTTCTCTTGTTTATAGCAACCTATGCAG					PREDICTED: Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 7, transcript variant 5 (Abcb7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217286	ILMN_217286	HTR5A	NM_008314.2	NM_008314.2		15563	84370344	NM_008314.2	Htr5a	NP_032340.2	ILMN_2681462	002060400	S	1587	GGGAGTGCCTTCTTCCCATAGCTTGTAGCTCAGTGGGTTATATTGTCCCA	5	+	28177637-28177686	5qB1	Mus musculus 5-hydroxytryptamine (serotonin) receptor 5A (Htr5a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response [goid 19933] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISO]	Htr5	Htr5
Mus musculus	RefSeq	ILMN_260547	ILMN_260547	2300002D11RIK	NM_001081156.1	NM_001081156.1		69539	124487218	NM_001081156.1	2300002D11Rik	NP_001074625.1	ILMN_3119914	000990221	A	1517	GATGTATCCTGATAGAGGGAAGGAGGCACATTTACTCCCACACCGCCCAG				4qD2.3	Mus musculus RIKEN cDNA 2300002D11 gene (2300002D11Rik), mRNA.				MGC57108	MGC57108
Mus musculus	RefSeq	ILMN_211757	ILMN_211757	RLN3	NM_173184.1	NM_173184.1		212108	27502354	NM_173184.1	Rln3	NP_775276.1	ILMN_2619211	006270066	S	356	AGTGGTTCGGGGCAGCAGAGATGTGTTGGCTGGCCTTTCCAGCAGTTGCT	8	-	86567035-86567084	8qC3	Mus musculus relaxin 3 (Rln3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30819] [evidence ISA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	M3; insl7	M3; insl7
Mus musculus	RefSeq	ILMN_220936	ILMN_220936	D130040H23RIK	NM_172491.2	NM_172491.2		211135	110665706	NM_172491.2	D130040H23Rik	NP_766079.1	ILMN_1221081	002600370	S	1825	GTGTTTAGTGAGATCTGTAGCCAACACACTTCCATCCGGGACAGAATATT	8	+	71827097-71827146	8qB3.3	Mus musculus RIKEN cDNA D130040H23 gene (D130040H23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218641	ILMN_218641	CDK7	NM_009874.2	NM_009874.2		12572	141802241	NM_009874.2	Cdk7	NP_034004.1	ILMN_2698458	003520521	S	1151	CTGCTGAAATAAATGATCCAAAGGCAAATAATGGAAAAAATAGTGAATAT	13	-	101473357-101473406	13qD1	Mus musculus cyclin-dependent kinase 7 (homolog of Xenopus MO15 cdk-activating kinase) (Cdk7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	AI528512; AI323415; Cdkn7; Crk4	AI528512; AI323415; Cdkn7; Crk4
Mus musculus	RefSeq	ILMN_212243	ILMN_225190	ADH6A	NM_026945.1	NM_026945.1		69117	124286788	NM_026945.1	Adh6a	NP_081221.1	ILMN_1247628	002370538	S	1186	GAGATCTCAGTGATAAAGAAGAGCTCGGGAGCAACCAGAAGGGCTTTCCT	3	+	137993943-137993944:137993945-137993992	3qG3	Mus musculus alcohol dehydrogenase 6A (class V) (Adh6a), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Adh5a; 1810009C16Rik	Adh5a; 1810009C16Rik
Mus musculus	RefSeq	ILMN_216651	ILMN_216651	CD200R3	NM_029018.3	NM_029018.3		74603	142369513	NM_029018.3	Cd200r3	NP_083294.2	ILMN_2673675	002100292	S	1158	CAGTTACCTAGTGTCCTACCAATATATTTCCTAGTAAAAGTTCACGTGCC	16	+	44981181-44981230	16qB4-qB5	Mus musculus CD200 receptor 3 (Cd200r3), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BB106877; 4833409J19Rik; MGC123954; mCD200RLb; 4733401I18Rik; AI505817	BB106877; 4833409J19Rik; MGC123954; mCD200RLb; 4733401I18Rik; AI505817
Mus musculus	RefSeq	ILMN_216494	ILMN_329423	LOC100048537	XM_001480582.1	XM_001480582.1		100048537	149269518	XM_001480582.1	LOC100048537	XP_001480632.1	ILMN_2671698	000610424	S	3286	GGTATCTCTAACACCAGCACACTTCTTACGAGATGTACTCAACCTGGCCT					PREDICTED: Mus musculus similar to Endothelial PAS domain protein 1 (LOC100048537), mRNA.					
Mus musculus	MEEBO	ILMN_189030	ILMN_189030	APBB1IP	scl0319656.1_10				34328064	NM_019456	Apbb1ip		ILMN_2755666	003460747	S	1992	AGGCAAGAGAACCAAGGACTCCCCGGTGCACCAGGGAACAGTGAGCAAGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]			
Mus musculus	MEEBO	ILMN_189030	ILMN_189030	APBB1IP	scl0319656.1_10				34328064	NM_019456	Apbb1ip		ILMN_2755667	001470253	S	1993	GGCAAGAGAACCAAGGACTCCCCGGTGCACCAGGGAACAGTGAGCAAGAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]			
Mus musculus	MEEBO	ILMN_189030	ILMN_189030	APBB1IP	scl0319656.1_10				34328064	NM_019456	Apbb1ip		ILMN_1229072	001110402	S	20	AAGACAAGCATGGACATTATGCACATAATTGGAATGTTATGCAATGTTTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]			
Mus musculus	RefSeq	ILMN_215277	ILMN_215277	PRR13	NM_025385.2	NM_025385.2		66151	31982676	NM_025385.2	Prr13	NP_079661.1	ILMN_2657516	005290561	S	1235	CTGCTGGAAAGTGCAGTCTCTTTACTTGGTGAGCTCTTTTGGGACCCGAC	15	+	102293097-102293146	15qF3	Mus musculus proline rich 13 (Prr13), mRNA.				1110020C13Rik; 2010324E22Rik	1110020C13Rik; 2010324E22Rik
Mus musculus	RefSeq	ILMN_240039	ILMN_240039	HOXB3	NM_010458.2	NM_010458.2		15410	120300924	NM_010458.2	Hoxb3	NP_034588.2	ILMN_3150064	004010619	A	1851	GCGCGGTTTAGAGTCCTGAAAGAGGTGTGGGATGGGGTTGTCGCCAGGTT	11	+	96207782-96207831	11qD	Mus musculus homeo box B3 (Hoxb3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion [goid 21615] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hox-2.7	Hox-2.7
Mus musculus	RefSeq	ILMN_188206	ILMN_240039	HOXB3	NM_010458.2	NM_010458.2		15410	120300924	NM_010458.2	Hoxb3	NP_034588.2	ILMN_2450689	005890132	S	3154	CAGCTCCTAAATGTCACTGTATAGTCCCGAATTTGTAGAGATAAGAAGTT	11	+	96209085-96209134	11qD	Mus musculus homeo box B3 (Hoxb3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion [goid 21615] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hox-2.7	Hox-2.7
Mus musculus	RefSeq	ILMN_240039	ILMN_240039	HOXB3	NM_010458.2	NM_010458.2		15410	120300924	NM_010458.2	Hoxb3	NP_034588.2	ILMN_3071262	002710358	I	23	GAGGGGCAATGGTCCACGAAGCAGTGGTGTTCTATTCCTAAGCGGTCCTC	11	+	96205105-96205154	11qD	Mus musculus homeo box B3 (Hoxb3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion [goid 21615] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hox-2.7	Hox-2.7
Mus musculus	RefSeq	ILMN_188206	ILMN_240039	HOXB3	NM_010458.2	NM_010458.2		15410	120300924	NM_010458.2	Hoxb3	NP_034588.2	ILMN_1232276	000990180	S	1829	AGACGGCGGACTTGGGGGATGGGCGCGGTTTAGAGTCCTGAAAGAGGTGT	11	+	96207760-96207809	11qD	Mus musculus homeo box B3 (Hoxb3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion [goid 21615] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hox-2.7	Hox-2.7
Mus musculus	RefSeq	ILMN_213257	ILMN_330412	IGH-VJ558	XM_001472091.1	XM_001472091.1		16061	149263765	XM_001472091.1	Igh-VJ558	XP_001472141.1	ILMN_2635272	006380762	S	966	CACCCAGAAGACCATCGACCGTCTGTCGGGTAAACCCACCAATGTCAGCG					PREDICTED: Mus musculus immunoglobulin heavy chain (J558 family) (Igh-VJ558), mRNA.					
Mus musculus	RefSeq	ILMN_194884	ILMN_240836	TROAP	XM_912265.2	XM_912265.2		78733	94399276	XM_912265.2	Troap	XP_917358.1	ILMN_1213921	004780360	S	2376	CTCTTCCTTTAGCCTTATTTATTGTTGGCCTGCCCATTGGACTGGGAGCC				15qF1	PREDICTED: Mus musculus trophinin associated protein (Troap), mRNA.					
Mus musculus	RefSeq	ILMN_217454	ILMN_217454	ITPR2	NM_019923.3	NM_019923.3		16439	60593031	NM_019923.3	Itpr2	NP_064307.2	ILMN_3076170	003830600	I	606	AGCCCCTGCATGCCAGCAACGTGGAGCTCTTGGACAACCCAGGCTGCAAA	6	-	146366942-146366991	6qG3	Mus musculus inositol 1,4,5-triphosphate receptor 2 (Itpr2), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IDA];  [goid 15278] [evidence IDA]; Combining with inositol-1,4,5-triphosphate to initiate a change in cell activity [goid 8095] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5220] [evidence IEA]	Ip3r2; AI649341; InsP3R-2; Itpr5; InsP3R-5	Ip3r2; AI649341; InsP3R-2; Itpr5; InsP3R-5
Mus musculus	RefSeq	ILMN_217454	ILMN_217454	ITPR2	NM_019923.3	NM_019923.3		16439	60593031	NM_019923.3	Itpr2	NP_064307.2	ILMN_3155180	007610450	A	8172	ATCGGATGCCTGCCTCATCACAGAGGGATGGAGATGGAGGGGAGCGAACA	6	-	146060111-146060160	6qG3	Mus musculus inositol 1,4,5-triphosphate receptor 2 (Itpr2), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IDA];  [goid 15278] [evidence IDA]; Combining with inositol-1,4,5-triphosphate to initiate a change in cell activity [goid 8095] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5220] [evidence IEA]	Ip3r2; AI649341; InsP3R-2; Itpr5; InsP3R-5	Ip3r2; AI649341; InsP3R-2; Itpr5; InsP3R-5
Mus musculus	MEEBO	ILMN_216703	ILMN_216703	MST1R	scl0003551.1_44				6677764	NM_009074	Mst1r		ILMN_2773374	000360750	S	4050	ACCCCCATATCGATCCCTTCGACCTCTCTCACTTCCTGGCTCAGGGCCGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216703	ILMN_216703	MST1R	scl0003551.1_44				6677764	NM_009074	Mst1r		ILMN_2757671	002680390	S	4492	CTCCACTCTTTAGCTTTCTGGGGCCACTGAAGGTGGGAAACCGGGCCCAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209917	ILMN_209917	MPO	NM_010824.1	NM_010824.1		17523	6754731	NM_010824.1	Mpo	NP_034954.1	ILMN_2925094	006280168	S	2338	AACAACATTGACATCTGGATGGGCGGTGTGTCCGAGCCCCTGGAACCCAA	11	+	87616140-87616189	11qC	Mus musculus myeloperoxidase (Mpo), nuclear gene encoding mitochondrial protein, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA4033; mKIAA4033	KIAA4033; mKIAA4033
Mus musculus	RefSeq	ILMN_209917	ILMN_209917	MPO	NM_010824.1	NM_010824.1		17523	6754731	NM_010824.1	Mpo	NP_034954.1	ILMN_2719256	006450128	S	1721	GCCTGAATCCTCGATGGAATGGGGAGAAGCTCTACCAGGAGGCCCGGAAG	11	+	87613463-87613512	11qC	Mus musculus myeloperoxidase (Mpo), nuclear gene encoding mitochondrial protein, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA4033; mKIAA4033	KIAA4033; mKIAA4033
Mus musculus	RefSeq	ILMN_209917	ILMN_209917	MPO	NM_010824.1	NM_010824.1		17523	6754731	NM_010824.1	Mpo	NP_034954.1	ILMN_2600421	006580021	S	2597	CCCGAGACTTTGTCAGCTGTAACACCCTTCCTAAACTGAACCTGACTTCC	11	+	87617047-87617096	11qC	Mus musculus myeloperoxidase (Mpo), nuclear gene encoding mitochondrial protein, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA4033; mKIAA4033	KIAA4033; mKIAA4033
Mus musculus	RefSeq	ILMN_209917	ILMN_209917	MPO	NM_010824.1	NM_010824.1		17523	6754731	NM_010824.1	Mpo	NP_034954.1	ILMN_1249030	000940309	S	2684	GGACGGAGGCCATTGGCCTTCCTGTGCTATTTGTACCTGAGGTTCACACT	11	+	87617849-87617898	11qC	Mus musculus myeloperoxidase (Mpo), nuclear gene encoding mitochondrial protein, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA4033; mKIAA4033	KIAA4033; mKIAA4033
Mus musculus	RefSeq	ILMN_216640	ILMN_216640	FDXR	NM_007997.1	NM_007997.1		14149	6679766	NM_007997.1	Fdxr	NP_032023.1	ILMN_2984012	005260382	S	1704	TTCTGCAAGCTGACCTCCCAGTGTGGCTTGAGGCCAAGGAGGGAACCTGA	11	-	115129451-115129500	11qE2	Mus musculus ferredoxin reductase (Fdxr), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: reduced ferredoxin + NADP+ = oxidized ferredoxin + NADPH + H+ [goid 4324] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216640	ILMN_216640	FDXR	NM_007997.1	NM_007997.1		14149	6679766	NM_007997.1	Fdxr	NP_032023.1	ILMN_1219942	005820647	S	1629	CTCGTTCATTATGTTATTGACGGCCCTGGCTTAGACGCCGAACCGTGCCC	11	-	115129526-115129575	11qE2	Mus musculus ferredoxin reductase (Fdxr), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: reduced ferredoxin + NADP+ = oxidized ferredoxin + NADPH + H+ [goid 4324] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216640	ILMN_216640	FDXR	NM_007997.1	NM_007997.1		14149	6679766	NM_007997.1	Fdxr	NP_032023.1	ILMN_1214585	005270053	S	1215	CCAAGCTTGGAGTCATCCCCAACACAGAGGGCCGGGTTGTGAATGTCCCA	11	-	115130759-115130808	11qE2	Mus musculus ferredoxin reductase (Fdxr), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: reduced ferredoxin + NADP+ = oxidized ferredoxin + NADPH + H+ [goid 4324] [evidence IEA]		
Mus musculus	Riken	ILMN_206627	ILMN_206627	MMS19L	ri|7530407P09|PX00312G23|AK078688|2368					AK078688	Mms19l		ILMN_1214523	003990327	S	2169	GCTTCCTGGCTCACCCTCGTAGCTGATTCAGAGACCGTGCACACCCACAA										
Mus musculus	RefSeq	ILMN_188515	ILMN_188515	RNF112	NM_009548.2	NM_009548.2		22671	20127401	NM_009548.2	Rnf112	NP_033574.2	ILMN_1220743	002810400	S	1	GCAGGGGGCCTCTCTCGGGGGATGGAGATTTCTAAAGAGACTTCTGGGCT	11	-	61267338-61267351:61267352-61267387	11qB2	Mus musculus ring finger protein 112 (Rnf112), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	bfp; R75574; ZNF179; AI854096	bfp; R75574; ZNF179; AI854096
Mus musculus	RefSeq	ILMN_217955	ILMN_217955	1700113O17RIK	NM_026627.1	NM_026627.1		68231	13386111	NM_026627.1	1700113O17Rik	NP_080903.1	ILMN_2689749	006250576	S	457	CCCAGCTCCAATGTCCTACTAGCTGGGGGAGCTAATCAAACATGCTATTA	2	-	17918067-17918116	2qA3	Mus musculus RIKEN cDNA 1700113O17 gene (1700113O17Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	RP23-350C1.1; H2al2	RP23-350C1.1; H2al2
Mus musculus	RefSeq	ILMN_210743	ILMN_312038	ZFP618	XM_001473196.1	XM_001473196.1		72701	149252570	XM_001473196.1	Zfp618	XP_001473246.1	ILMN_2618049	005490368	S	2401	CGCCGCTCAGGAAGAGGACCGGCTGGGCAAGAACGAAGTCTATGATTATC	4	+	62794597-62794646	4qB3	PREDICTED: Mus musculus zinc fingerprotein 618 (Zfp618), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_210277	ILMN_210277	PHXR2	scl37566.1.1_140	NM_008833.1			6679304	NM_008833.1	Phxr2		ILMN_2604002	005570661	S	915	CTCCCAAAGCTTCTGACATATTGTGCATATCTCCAGGTTACAAATGATTG										
Mus musculus	RefSeq	ILMN_217840	ILMN_217840	ADCY7	NM_007406.1	NM_007406.1		11513	6680645	NM_007406.1	Adcy7	NP_031432.1	ILMN_2688225	005870739	S	5047	CTGAGCCCCTCAACAAATGCCAAATTGTTCTTATGCAAATGAGTCAAGGC	8	+	90852787-90852836	8qC3	Mus musculus adenylate cyclase 7 (Adcy7), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS]	AA407758; MGC141539	AA407758; MGC141539
Mus musculus	RefSeq	ILMN_221832	ILMN_221832	PIGK	NM_025662.4	NM_025662.4		329777	87116684	NM_025662.4	Pigk	NP_079938.1	ILMN_1256434	004120270	S	1551	CTTCCGTTCATAGGTTTGTGTGTGCTGTCTTGGTCTGTTTATCTATGGAC	3	+	152448804-152448853	3qH3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class K (Pigk), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	3000001O05Rik	3000001O05Rik
Mus musculus	RefSeq	ILMN_221832	ILMN_221832	PIGK	NM_025662.4	NM_025662.4		329777	87116684	NM_025662.4	Pigk	NP_079938.1	ILMN_2755163	007150358	S	1521	AAAGGTGTTAGTTCCCACTAAAGGAAATTACTTCCGTTCATAGGTTTGTG	3	+	152448774-152448823	3qH3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class K (Pigk), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	3000001O05Rik	3000001O05Rik
Mus musculus	RefSeq	ILMN_221832	ILMN_221832	PIGK	NM_025662.4	NM_025662.4		329777	87116684	NM_025662.4	Pigk	NP_079938.1	ILMN_2740998	004070564	S	1194	GGGATCAAGCATATGAAGTTCATTTTCTAAGACTCAAGGATGTATGAGGA	3	+	152448447-152448476:152448477-152448496	3qH3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class K (Pigk), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	3000001O05Rik	3000001O05Rik
Mus musculus	RefSeq	ILMN_185055	ILMN_330013	LOC100044177	XM_001471637.1	XM_001471637.1		100044177	149266482	XM_001471637.1	LOC100044177	XP_001471687.1	ILMN_1232495	005560497	S	2605	CCGAGACACTTGATCTGACACAGGGGCAGTCGGGAAACCGATGACTGCAG					PREDICTED: Mus musculus hypothetical protein LOC100044177 (LOC100044177), mRNA.					
Mus musculus	RefSeq	ILMN_209308	ILMN_209308	TMEM127	NM_175145.3	NM_175145.3		69470	119360306	NM_175145.3	Tmem127	NP_780354.1	ILMN_2746107	000580392	S	4236	CAAAGTGGCTGTTGTATCTGGGGGAAAGGTCATTCTCTCTAGATGACTCC	2	+	127086335-127086384	2qF1	Mus musculus transmembrane protein 127 (Tmem127), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI314202; AI317350; 2310003P10Rik	AI314202; AI317350; 2310003P10Rik
Mus musculus	RefSeq	ILMN_233670	ILMN_233670	A830073O21RIK	NM_177118.3	NM_177118.3		320262	82524305	NM_177118.3	A830073O21Rik	NP_796092.1	ILMN_3160351	006940619	S	1714	CACAATGACGTAAATAACAGGAAGCGGGAGCATCAGGGCCACCTAACAGC	7	-	80884040-80884089	7qD2	Mus musculus RIKEN cDNA A830073O21 gene (A830073O21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_240668	ILMN_240668	GUCY2C	NM_145067.1	NM_145067.1		14917	71894984	NM_145067.1	Gucy2c	NP_659504.1	ILMN_2911551	004070719	S	1023	TCCTGACGCTGCCGTCTGAACAGTCCACCTCAAACACCTCTGTCGCCGAG	6	-	136724861-136724910	6qG1	Mus musculus guanylate cyclase 2c (Gucy2c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IDA]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]	Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IMP]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	GC-C; MGC107510; Gcc; AI893437	GC-C; MGC107510; Gcc; AI893437
Mus musculus	RefSeq	ILMN_221691	ILMN_221691	GTPBP4	NM_027000.4	NM_027000.4		69237	146141210	NM_027000.4	Gtpbp4	NP_081276.2	ILMN_1216072	005090097	S	2101	TGCGCAGTTTGGGTTTTTATGTCCAGTGCGTTCCGTACTTGATGAGCTTC				13qA1	Mus musculus GTP binding protein 4 (Gtpbp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	NGB; Crfg; Gtpbp3; 2610028C09Rik	NGB; Crfg; Gtpbp3; 2610028C09Rik
Mus musculus	MEEBO	ILMN_195377	ILMN_195377	NVL	scl15835.24_126				33468980	NM_026171	Nvl		ILMN_1217759	004150402	S	2875	GCAAGGGACAGCCACCCAAGCCCAATAAGAGGAGTAAAAAAAGTAGCAAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_236578	ILMN_236578	PCDHGC3	NM_033581.3	NM_033581.3		93706	118130764	NM_033581.3	Pcdhgc3	NP_291059.1	ILMN_2890002	005260403	S	2385	AGGCCTAATGCCACCGCACCTGTACCATCAGGTGTACCTCACCACGGACT	18	+	37968448-37968497	18qB3	Mus musculus protocadherin gamma subfamily C, 3 (Pcdhgc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcdh2; PC43; MGC106426	Pcdh2; PC43; MGC106426
Mus musculus	RefSeq	ILMN_218076	ILMN_218076	HSDL1	NM_175185.3	NM_175185.3		72552	141802950	NM_175185.3	Hsdl1	NP_780394.1	ILMN_2691227	006450619	S	3063	AAGGAAGGAGGAACTCGGAACCTTTGTAACTCATCCTGTGAATCAGAACG	8	-	122085917-122085966	8qE1	Mus musculus hydroxysteroid dehydrogenase like 1 (Hsdl1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	2700067E09Rik	2700067E09Rik
Mus musculus	RefSeq	ILMN_219172	ILMN_219172	DAPK3	NM_007828.1	NM_007828.1		13144	6681132	NM_007828.1	Dapk3	NP_031854.1	ILMN_2705227	006840678	S	909	AGCCTCAAGTCCCACTCGAGCATGCCGCGCAACACGAGCTACGCCAGCTT	10	+	80655242-80655291	10qC1	Mus musculus death-associated protein kinase 3 (Dapk3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_236215	ILMN_236215	AQP2	NM_009699.2	NM_009699.2		11827	31560619	NM_009699.2	Aqp2	NP_033829.2	ILMN_2794276	004150037	S	1097	CTTGCAGGGAACCAGACACTTGGGGATCGTGGCAGTGGGGAGACGGAGAG	15	+	99414673-99414722	15qF1	Mus musculus aquaporin 2 (Aqp2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the endosome membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 31303] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISM]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Organelle consisting of networks of 60nm tubules organized around the microtubule organizing centre in some cell types. They transport receptors from late endosomes back to the plasma membrane for recycling and are also involved in membrane trafficking [goid 55037] [evidence IDA]; The lipid bilayer surrounding a recycling endosome [goid 55038] [evidence IC ]	The directed movement of water (H2O) by the kidney [goid 3097] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of water [goid 42631] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence IDA]	cph; jpk	cph; jpk
Mus musculus	Riken	ILMN_207198	ILMN_207198	B930071N01RIK	ri|B930071N01|PX00665C20|AK081032|3463					AK081032	B930071N01Rik		ILMN_1247868	005390735	S	3385	GGAGACCAAAGGCGGTAATACATGGGAGGTATGGAAAGGAATAGAAGAGG										
Mus musculus	Riken	ILMN_204453	ILMN_204453	B130008O17RIK	ri|B130008O17|PX00156L04|AK044865|3430					AK044865	B130008O17Rik		ILMN_2565096	004180246	S	3300	CAGCAGCTTTCCAGGTCCCGTAGGTCATCGATCTTAGGGCCAGTTCACAC										
Mus musculus	RefSeq	ILMN_220046	ILMN_220046	MATN2	NM_016762.2	NM_016762.2		17181	120407044	NM_016762.2	Matn2	NP_058042.2	ILMN_2716959	004730008	S	3146	GCAGACCTACAAGCTGTAAAGCAAAATACAACCAGTACAGGAGACACTGG	15	+	34365623-34365672	15qB3.1	Mus musculus matrilin 2 (Matn2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]			matrilin-2; Crtm2; MGC102477	matrilin-2; Crtm2; MGC102477
Mus musculus	RefSeq	ILMN_187122	ILMN_187122	ZCCHC5	NM_199468.1	NM_199468.1		213436	41054991	NM_199468.1	Zcchc5	NP_955762.1	ILMN_2441346	006760474	S	2342	GAGCTCCAGTTTGACATTATTCATGCACCACGCTACCCTCTGATTCTTGG	X	-	104032976-104033025	XqD	Mus musculus zinc finger, CCHC domain containing 5 (Zcchc5), mRNA.				Mart3; D430021I08Rik; Mar3; Gm375; ZHC5	Mart3; D430021I08Rik; Mar3; Gm375; ZHC5
Mus musculus	RefSeq	ILMN_213379	ILMN_213379	CAMKV	NM_145621.2	NM_145621.2		235604	118130190	NM_145621.2	Camkv	NP_663596.1	ILMN_1243596	003190441	S	2704	GCAGCGATATGGGGAGGCTTTTCCTCTTTGTCTACCATCAGAGGCTGAGG	9	+	107851695-107851744	9qF1	Mus musculus CaM kinase-like vesicle-associated (Camkv), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	BC017634; MGC118008; MGC28873; BB074618; 1G5	BC017634; MGC118008; MGC28873; BB074618; 1G5
Mus musculus	RefSeq	ILMN_220331	ILMN_220331	OLFR155	NM_019473.1	NM_019473.1		29845	11276074	NM_019473.1	Olfr155	NP_062346.1	ILMN_2720678	006960703	S	1107	CGTTCCTTAAGCACCAATGCTTCTAGTTAACAGGCTGGAAGGACAAGCCT	4|NT_039296.1	-	43867179-43867182:43867183-43867228	4qB1	Mus musculus olfactory receptor 155 (Olfr155), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence TAS]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mOR37a; GA_x5J8B7W5BNN-979337-980296; MOR262-14; Olfr37a; OR37A; MGC161319	mOR37a; GA_x5J8B7W5BNN-979337-980296; MOR262-14; Olfr37a; OR37A; MGC161319
Mus musculus	MEEBO	ILMN_195614	ILMN_195614	APC	scl52128.21_609				6680691	NM_007462	Apc		ILMN_2655204	005670327	S	8277	GAGCGTACCCCTTTCAGTTCCAGTAGCTCCAGCAAGCACAGCTCACCTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence ISO]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; The establishment, maintenance and elaboration of a pattern along a line or a point [goid 9798] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IDA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218070	ILMN_218070	CACNA1G	NM_009783.1	NM_009783.1		12291	6753231	NM_009783.1	Cacna1g	NP_033913.1	ILMN_1251322	006660437	S	7329	TTGAATCTAGTATATGCTGGATGTACGACATTTTGTGACTGAAGAGACTT	11	-	94270076-94270125	11qD	Mus musculus calcium channel, voltage-dependent, T type, alpha 1G subunit (Cacna1g), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]	[a]1G; mKIAA1123; Cav3.1d; a1G; alpha-1G	[a]1G; mKIAA1123; Cav3.1d; a1G; alpha-1G
Mus musculus	RefSeq	ILMN_218070	ILMN_218070	CACNA1G	NM_009783.1	NM_009783.1		12291	6753231	NM_009783.1	Cacna1g	NP_033913.1	ILMN_1241838	001070014	S	7520	CCCAACGGCGGCCCATCTTCAACGGAAAGCGAGAACCATTTTGGAAACTG	11	-	94269885-94269934	11qD	Mus musculus calcium channel, voltage-dependent, T type, alpha 1G subunit (Cacna1g), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]	[a]1G; mKIAA1123; Cav3.1d; a1G; alpha-1G	[a]1G; mKIAA1123; Cav3.1d; a1G; alpha-1G
Mus musculus	RefSeq	ILMN_191965	ILMN_218070	CACNA1G	NM_009783.1	NM_009783.1		12291	6753231	NM_009783.1	Cacna1g	NP_033913.1	ILMN_1247014	001070463	S	7379	CAAGTCTCTTCAGTCACAAAATGTCGTACATCCAGCATATACTAGATTCA	11	-	94270026-94270075	11qD	Mus musculus calcium channel, voltage-dependent, T type, alpha 1G subunit (Cacna1g), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]	[a]1G; mKIAA1123; Cav3.1d; a1G; alpha-1G	[a]1G; mKIAA1123; Cav3.1d; a1G; alpha-1G
Mus musculus	RefSeq	ILMN_218070	ILMN_218070	CACNA1G	NM_009783.1	NM_009783.1		12291	6753231	NM_009783.1	Cacna1g	NP_033913.1	ILMN_1256998	003190692	S	7390	CTTTTATGTGTCTCAGAATATTTTTGAGGCGAAAGCGTCTGTCTCTTGGC	11	-	94270015-94270064	11qD	Mus musculus calcium channel, voltage-dependent, T type, alpha 1G subunit (Cacna1g), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]	[a]1G; mKIAA1123; Cav3.1d; a1G; alpha-1G	[a]1G; mKIAA1123; Cav3.1d; a1G; alpha-1G
Mus musculus	RefSeq	ILMN_201053	ILMN_201053	LOC381971	XM_356006.1	XM_356006.1			38088285	XM_356006.1	LOC381971		ILMN_1236535	001170452	S	444	GCTGACTACTTTGTGCAAGGCTCTGTGAGGGGTCTGATTGGGACAATGCC										
Mus musculus	RefSeq	ILMN_233621	ILMN_233621	ZFP295	NM_001081685.1	NM_001081685.1		114565	126157481	NM_001081685.1	Zfp295	NP_001075154.1	ILMN_3085946	000380707	A	4803	GCATTGCCAGCTCCTGCCCCAACACTTGAACCTGTGCTACGTTTTTGAAG	16	-	98169157-98169206	16qC4	Mus musculus zinc finger protein 295 (Zfp295), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Znf295; B430213I24Rik; 5430437K12Rik; mKIAA1227	Znf295; B430213I24Rik; 5430437K12Rik; mKIAA1227
Mus musculus	RefSeq	ILMN_217624	ILMN_318958	LOC100046841	XM_001476879.1	XM_001476879.1		100046841	149251003	XM_001476879.1	LOC100046841	XP_001476929.1	ILMN_1222165	002630044	S	1131	GTCTTCCCATAAGTCATAGAAGCTTGATGGTGATTATTTTGAGGTTTCCA					PREDICTED: Mus musculus similar to RP42 (LOC100046841), mRNA.					
Mus musculus	MEEBO	ILMN_216722	ILMN_216722	AS3MT	scl057344.13_241	NM_020577.1			10181145	NM_020577.1	As3mt		ILMN_2707198	005870619	S	619	GACGTCTATGCCAGCCTTGAAGTGCCAGAAGACATCAAGTCGCACAAAGT						That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides [goid 46685] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides [goid 46685] [evidence ISO]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + arsenite = S-adenosyl-L-homocysteine + methylarsonate [goid 30791] [evidence ISA]; Catalysis of the reaction: S-adenosyl-L-methionine + arsenite = S-adenosyl-L-homocysteine + methylarsonate [goid 30791] [evidence ISO]		
Mus musculus	RefSeq	ILMN_211042	ILMN_211042	PTPLAD1	NM_021345.1	NM_021345.1		57874	28916662	NM_021345.1	Ptplad1	NP_067320.1	ILMN_2611874	004150669	S	2600	ATGCCGTATCCCTGTGCAAACTCCCATGTTCTAGTTGCTGTTAGCATCCC	9	-	64834857-64834906	9qC	Mus musculus protein tyrosine phosphatase-like A domain containing 1 (Ptplad1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC25483; B-ind1; AW742319; 4930523M17Rik; Hspc121	MGC25483; B-ind1; AW742319; 4930523M17Rik; Hspc121
Mus musculus	RefSeq	ILMN_221125	ILMN_221125	PKD2L1	NM_181422.2	NM_181422.2		329064	31340854	NM_181422.2	Pkd2l1	NP_852087.1	ILMN_2731331	007150008	S	3210	GGTGGTCTCTGGCTCTCTTCGTCATAGGACAATGTGAGGTTCCAAGGTGA	19	-	44222154-44222203	19qC3	Mus musculus polycystic kidney disease 2-like 1 (Pkd2l1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IPI]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IPI]	PCL; BC046386; B830002B15; Pkdl; PKD2L; TRPP3	PCL; BC046386; B830002B15; Pkdl; PKD2L; TRPP3
Mus musculus	MEEBO	ILMN_217023	ILMN_217023	IL1R1	scl18036.15.1_285	NM_008362.1			6680416	NM_008362.1	Il1r1		ILMN_2711615	007650731	S	818	TGCCGTATGTCCTATACGTTCCGGGGGAAGCAATATCCGGTCACACGAGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4909] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IDA]		
Mus musculus	RefSeq	ILMN_186343	ILMN_229328	PSMC6	NM_025959.3	NM_025959.3		67089	142373033	NM_025959.3	Psmc6	NP_080235.2	ILMN_2631558	005130280	S	1352	GGTACAGAAGAAAGTCATGTTTGGTGATGTTGCATTTACTTCAGCAGAAT	14	+	45968534-45968583	14qC1	Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 6 (Psmc6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	2300001E01Rik; AI451058; MGC151129	2300001E01Rik; AI451058; MGC151129
Mus musculus	RefSeq	ILMN_197348	ILMN_248825	2810408M09RIK	NM_001007581.1	NM_001007581.1		381406	62510084	NM_001007581.1	2810408M09Rik	NP_001007582.1	ILMN_1234585	001240411	S	624	CACCGAGACCGTGTTTGAAGCCTTTCTGAAGAGTTACGGGGCCTCGACCC	2	-	165316806-165316855	2qH3	Mus musculus RIKEN cDNA 2810408M09 gene (2810408M09Rik), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	RP23-395E18.2; MGC102419	RP23-395E18.2; MGC102419
Mus musculus	RefSeq	ILMN_187562	ILMN_248825	2810408M09RIK	NM_001007581.1	NM_001007581.1		381406	62510084	NM_001007581.1	2810408M09Rik	NP_001007582.1	ILMN_2448839	000290131	S	1227	CGGGTATTTGTTATATGTATGAAGACTGTGCTCGAGGCTAGTTCAGTGGA	2	-	165316203-165316252	2qH3	Mus musculus RIKEN cDNA 2810408M09 gene (2810408M09Rik), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	RP23-395E18.2; MGC102419	RP23-395E18.2; MGC102419
Mus musculus	RefSeq	ILMN_248825	ILMN_248825	2810408M09RIK	NM_001007581.1	NM_001007581.1		381406	62510084	NM_001007581.1	2810408M09Rik	NP_001007582.1	ILMN_2851455	004860176	S	1442	TTCCAAAGGACTCCAGTGTGGTTTCCAGCACCCAGCTGAGGGACCCAGTG	2	-	165315988-165316037	2qH3	Mus musculus RIKEN cDNA 2810408M09 gene (2810408M09Rik), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	RP23-395E18.2; MGC102419	RP23-395E18.2; MGC102419
Mus musculus	RefSeq	ILMN_198342	ILMN_198342	LOC232787	XM_133120.4	XM_133120.4			38084036	XM_133120.4	LOC232787		ILMN_1238431	005890176	S	2425	TGCCGAGTCTCAGGCAGTGGCGGCGGCCCCAAACCCTACAAATGCCCTGA										
Mus musculus	RefSeq	ILMN_189630	ILMN_231312	9030425E11RIK	NM_133733.4	NM_133733.4		71566	146149204	NM_133733.4	9030425E11Rik	NP_598494.2	ILMN_2724194	001470332	S	2738	AAGGAGTAAACTGCCATTAGGGAGTAGGTGGTGAGCAAAACAAGGGGTGG				9qA5.1	Mus musculus RIKEN cDNA 9030425E11 gene (9030425E11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			CLMP; AW557819; ACAM; ASP5	CLMP; AW557819; ACAM; ASP5
Mus musculus	RefSeq	ILMN_262132	ILMN_234105	SLC10A7	NM_029736.1	NM_029736.1		76775	113199772	NM_029736.1	Slc10a7	NP_084012.1	ILMN_3163124	000730301	A	1209	GTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAG	8	+	81253638-81253662:81255508-81255532	8qC1	Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 7 (Slc10a7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	P7; 2410193C02Rik	P7; 2410193C02Rik
Mus musculus	RefSeq	ILMN_262132	ILMN_234105	SLC10A7	NM_029736.1	NM_029736.1		76775	113199772	NM_029736.1	Slc10a7	NP_084012.1	ILMN_3162636	001580341	I	1022	CGGGGTTCACACCAGCAGACACAGTGGCTATCATCTTCTGCTCCACACAC	8	+	81230782-81230831	8qC1	Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 7 (Slc10a7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	P7; 2410193C02Rik	P7; 2410193C02Rik
Mus musculus	RefSeq	ILMN_262134	ILMN_234105	SLC10A7	NM_029736.1	NM_029736.1		76775	113199772	NM_029736.1	Slc10a7	NP_084012.1	ILMN_3162658	003450653	I	744	CATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGAC	8	+	81210516-81210565	8qC1	Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 7 (Slc10a7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	P7; 2410193C02Rik	P7; 2410193C02Rik
Mus musculus	RefSeq	ILMN_196526	ILMN_234105	SLC10A7	NM_029736.1	NM_029736.1		76775	113199772	NM_029736.1	Slc10a7	NP_084012.1	ILMN_2627541	003710309	S	3530	AATTTTTTCAAAGAGATGGCTAAGTAATTAAGTGGGTTATTTATAATGAA	8	+	81257804-81257853	8qC1	Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 7 (Slc10a7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	P7; 2410193C02Rik	P7; 2410193C02Rik
Mus musculus	RefSeq	ILMN_215925	ILMN_215925	A930025D01RIK	NM_178762.3	NM_178762.3		319513	141803380	NM_178762.3	A930025D01Rik	NP_848877.1	ILMN_1232280	001030471	S	2790	GCCTGGATAGGCAGGATCTTAGGTTGGAGCTAGAGATACCAGTGGCCCTG	2	-	130244786-130244821:130244822-130244835	2qF1	Mus musculus RIKEN cDNA A930025D01 gene (A930025D01Rik), mRNA.				AI480484	AI480484
Mus musculus	RefSeq	ILMN_215925	ILMN_215925	A930025D01RIK	NM_178762.3	NM_178762.3		319513	141803380	NM_178762.3	A930025D01Rik	NP_848877.1	ILMN_1223523	004570215	S	3547	GTGAGTTAATAAAACCTTTGGGGGAGACAAGAGACTTGCAGAGGCACTGG	2	-	130244029-130244078	2qF1	Mus musculus RIKEN cDNA A930025D01 gene (A930025D01Rik), mRNA.				AI480484	AI480484
Mus musculus	RefSeq	ILMN_262084	ILMN_255104	EG574082	NR_002879.2	NR_002879.2		654454	124517712	NR_002879.2	EG574082		ILMN_3160566	003830189	S	90	GCAAATGTAGACATGTATGCAGTAATGTTGAAATGAGAGTTGTTGCCTGC	1	-	18200216-18200265	1qA3	Mus musculus predicted gene, EG574082 (EG574082), non-coding RNA.				Defb49-ps; Defb49	Defb49-ps; Defb49
Mus musculus	RefSeq	ILMN_213715	ILMN_213715	1700034I23RIK	NM_028494.2	NM_028494.2		73297	142364960	NM_028494.2	1700034I23Rik	NP_082770.1	ILMN_1239150	003890400	S	447	CCAGCTTGCAAACCACACTGGCTACATCAAAGTTGACTGGAGTCGAGTAG	3	-	40705969-40706018	3qB	Mus musculus RIKEN cDNA 1700034I23 gene (1700034I23Rik), mRNA.				MGC143484	MGC143484
Mus musculus	RefSeq	ILMN_255605	ILMN_255605	HEL308	NM_001081107.1	NM_001081107.1		191578	124487402	NM_001081107.1	Hel308	NP_001074576.1	ILMN_3025192	005130114	I	2995	CACCAAGAAGCTGACGTACTGCGTGAAGGCGGAGCTAATCCCTCTCATGG	5	-	101195726-101195775	5qE4	Mus musculus helicase, mus308-like (Drosophila) (Hel308), mRNA.	A protein complex that possesses single-stranded DNA-dependent DNA helicase activity [goid 17117] [evidence ISO]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of a DNA helix [goid 17116] [evidence ISO]	D430018E21Rik; MGC105224	D430018E21Rik; MGC105224
Mus musculus	RefSeq	ILMN_198003	ILMN_255605	HEL308	NM_001081107.1	NM_001081107.1		191578	124487402	NM_001081107.1	Hel308	NP_001074576.1	ILMN_1245030	007050400	S	1666	GTACTCTGAGGCCCTGAAGAAGATGGATCCCGACCGCTTGGTAGCACTGG	5	-	101214397-101214446	5qE4	Mus musculus helicase, mus308-like (Drosophila) (Hel308), mRNA.	A protein complex that possesses single-stranded DNA-dependent DNA helicase activity [goid 17117] [evidence ISO]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of a DNA helix [goid 17116] [evidence ISO]	D430018E21Rik; MGC105224	D430018E21Rik; MGC105224
Mus musculus	Riken	ILMN_206014	ILMN_206014	SWAP70	ri|B130063A01|PX00158N04|AK045295|1164					AK045295	Swap70		ILMN_1231843	001070402	S	845	GCTGGATGAAAACTGCTGTGTGGAGGTGAGTGGGCGTGGCCTCTGCAGTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Recombination occurring within or between DNA molecules in somatic cells [goid 16444] [evidence IDA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]		
Mus musculus	Riken	ILMN_203471	ILMN_203471	GRIA4	ri|6330587J20|PX00044J18|AK032103|2339					AK032103	Gria4		ILMN_1259062	006280524	S	2084	GATTGGCTCGCTAAGAAGAAATTTCTGCCAAGAAAAACTGAATTCTGTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus [goid 32281] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_206540	ILMN_206540	2700069A02RIK	ri|2700069A02|ZX00063F08|AK076066|2008					AK076066	2700069A02Rik		ILMN_1220923	000060692	S	1547	GAGCCTCGATACTGACTCCAAAACCAGCACCGTCTTCTAATGGCCAGCTC										
Mus musculus	RefSeq	ILMN_211677	ILMN_211677	TARDBP	NM_145556.3	NM_145556.3		230908	56682927	NM_145556.3	Tardbp	NP_663531.1	ILMN_3029953	005670615	I	1538	CGAGCATGGATTCTAAGTCTTCTGGCTGGGGAATGTAGGTGGTGGGGGGT	4|NT_039289.1	-	147992357-147992369:147992370-147992406	4qE2	Mus musculus TAR DNA binding protein (Tardbp), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	1190002A23Rik; C85084	1190002A23Rik; C85084
Mus musculus	MEEBO	ILMN_188204	ILMN_188204	5530400K22RIK	scl49076.1_153						5530400K22Rik		ILMN_2450676	007050594	S	20	ACTGGGCGTGATGCTTACGTAGGCAAGCACCGGGGAACAGGAGTTCAGTG										
Mus musculus	RefSeq	ILMN_197325	ILMN_229535	GM114	NM_001033298.2	NM_001033298.2		228730	142368782	NM_001033298.2	Gm114	NP_001028470.1	ILMN_2527733	004640056	S	2018	TGCCTTCTGGGGGGAGTCTGATGACAGTAACTCTGAAATCGAAGCTGCCC	2	+	146795322-146795323:146795693-146795740	2qG2	Mus musculus gene model 114, (NCBI) (Gm114), mRNA. XM_925684 XM_925685				RP23-8L8.2	RP23-8L8.2
Mus musculus	RefSeq	ILMN_216530	ILMN_216530	SLC17A4	NM_177016.3	NM_177016.3		319848	87299612	NM_177016.3	Slc17a4	NP_795990.2	ILMN_2672147	002000608	S	2142	AGACAGCTTTCTGTATGTGGATCCTGGCTTTGGATCAAAACCACTTCTGC	13	-	23990049-23990098	13qA3.1	Mus musculus solute carrier family 17 (sodium phosphate), member 4 (Slc17a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	9130214H05Rik	9130214H05Rik
Mus musculus	RefSeq	ILMN_213316	ILMN_213316	PSMD11	NM_178616.2	NM_178616.2		69077	31340846	NM_178616.2	Psmd11	NP_848731.1	ILMN_1230682	005870291	S	120	CACTCCATCGTGAAACGTGACATTCAAGAAAATGATGAGGAGGCATTCCA	11	+	80244942-80244950:80247900-80247940	11qB5	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 (Psmd11), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			S9; C78232; 1810019E17Rik; 1700089D09Rik; 2610024G20Rik; 2810055C24Rik; P44.5	S9; C78232; 1810019E17Rik; 1700089D09Rik; 2610024G20Rik; 2810055C24Rik; P44.5
Mus musculus	RefSeq	ILMN_213316	ILMN_213316	PSMD11	NM_178616.2	NM_178616.2		69077	31340846	NM_178616.2	Psmd11	NP_848731.1	ILMN_2888116	004060608	S	1013	GCTGTACGATAACTTACTGGAACAGAATCTGATCCGGGTCATCGAGCCTT	11	+	80286060-80286109	11qB5	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 (Psmd11), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			S9; C78232; 1810019E17Rik; 1700089D09Rik; 2610024G20Rik; 2810055C24Rik; P44.5	S9; C78232; 1810019E17Rik; 1700089D09Rik; 2610024G20Rik; 2810055C24Rik; P44.5
Mus musculus	RefSeq	ILMN_199839	ILMN_261079	EG668356	XM_001001083.1	XM_001001083.1		668356	94369766	XM_001001083.1	EG668356	XP_001001083.1	ILMN_1252424	005260300	S	1029	CCACTTTCTGGGTCCTGCACAGTGTTTCTTGGAGCCCTCACTCAAACAAC	3	+	93814881-93814930	3qF2.1	PREDICTED: Mus musculus predicted gene, EG668356 (EG668356), mRNA.					
Mus musculus	RefSeq	ILMN_212795	ILMN_212795	REG3B	NM_011036.1	NM_011036.1		18489	6754979	NM_011036.1	Reg3b	NP_035166.1	ILMN_2887421	000150162	S	436	GAACCCATCTACTGCCTTAGACCGTGCTTTCTGTGGCAGCTTGTCAAGAG	6	+	78322877-78322926	6qC3	Mus musculus regenerating islet-derived 3 beta (Reg3b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	PAP1; REG-III; INGAP; HIP; Reg3b	PAP1; REG-III; INGAP; HIP; Reg3b
Mus musculus	RefSeq	ILMN_212795	ILMN_212795	REG3B	NM_011036.1	NM_011036.1		18489	6754979	NM_011036.1	Reg3b	NP_035166.1	ILMN_2705804	006900424	S	534	CCTATGTCTGCAAATTTACTGGTTAAACTTATCAGACAGCAAACATCCCG	6	+	78323235-78323260:78323261-78323284	6qC3	Mus musculus regenerating islet-derived 3 beta (Reg3b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	PAP1; REG-III; INGAP; HIP; Reg3b	PAP1; REG-III; INGAP; HIP; Reg3b
Mus musculus	MEEBO	ILMN_218309	ILMN_218309	A930011G24	scl22228.6.1_111	NM_177853.2			31342839	NM_177853.2	A930011G24		ILMN_2694199	003360446	S	1171	TCTGGAGTGAGGGGCTGGGCGCGGGGTGGCATGGATGTGGGCTCTGTTTT										
Mus musculus	RefSeq	ILMN_197979	ILMN_197979	EG209324	XM_156070.1	XM_156070.1		209324	20892418	XM_156070.1	EG209324	XP_156070.1	ILMN_1260095	004150064	S	171	GGTGGATGTAGGGCATGGTCGTTTCCTTCACATAAGACTCTTCCAAGGGA	16	+	36311380-36311380:36312614-36312662	16qB3	PREDICTED: Mus musculus predicted gene, EG209324 (EG209324), mRNA.					
Mus musculus	MEEBO	ILMN_184183	ILMN_184183	9330175B01RIK	scl0106068.1_320				51829750	XM_128267	9330175B01Rik		ILMN_1219699	002000040	S	3936	CAGAACTTGGGCTTCAGGGAAGCAGGCTCAGCAAGTGCGGCTGTGGGTAA										
Mus musculus	MEEBO	ILMN_184183	ILMN_184183	9330175B01RIK	scl0106068.1_320				51829750	XM_128267	9330175B01Rik		ILMN_1232055	007570390	S	6	CTGCCAGGCTAGTGTCTCCCTGCCGCTATTGCTGTTACACTGTGGTTAAT										
Mus musculus	RefSeq	ILMN_206589	ILMN_325877	FER1L3	XM_001480162.1	XM_001480162.1		226101	149270771	XM_001480162.1	Fer1l3	XP_001480212.1	ILMN_1212842	004480717	S	2667	TCCCAAAGGCTGGGAGTGGGAAGGAGACTGGGTGGTTGACCCTGAACGAA				19qC2	PREDICTED: Mus musculus fer-1-like 3, myoferlin (C. elegans), transcript variant 1 (Fer1l3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_206609	ILMN_325877	FER1L3	XM_001480162.1	XM_001480162.1		226101	149270771	XM_001480162.1	Fer1l3	XP_001480212.1	ILMN_1214768	004920364	S	969	CCTGGGAACCGGAGACGAACCCCCTCCTGAGAAACGAGACCGTGACAATG				19qC2	PREDICTED: Mus musculus fer-1-like 3, myoferlin (C. elegans), transcript variant 1 (Fer1l3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_196670	ILMN_325877	FER1L3	XM_001480162.1	XM_001480162.1		226101	149270771	XM_001480162.1	Fer1l3	XP_001480212.1	ILMN_1223416	001710162	S	6045	GATCATCGGCCTGCTTCTGCTGCTCATCCTGTTGCTGTTCGTGGCTGTGC				19qC2	PREDICTED: Mus musculus fer-1-like 3, myoferlin (C. elegans), transcript variant 1 (Fer1l3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_261607	ILMN_261607	KCTD14	NM_001012434.2	NM_001012434.2		233529	118131132	NM_001012434.2	Kctd14	NP_001012436.1	ILMN_3022911	006840048	I	147	AGCAGTCTCAGCCCGCAAAATCGCTCAAGGAACCCAGTCAGGAGGCTCTG	7	+	104601860-104601909	7qE1	Mus musculus potassium channel tetramerisation domain containing 14 (Kctd14), mRNA.			Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	D7Ertd760e	D7Ertd760e
Mus musculus	RefSeq	ILMN_261607	ILMN_261607	KCTD14	NM_001012434.2	NM_001012434.2		233529	118131132	NM_001012434.2	Kctd14	NP_001012436.1	ILMN_3095279	000840369	A	1035	CCAGGAGTGGGGACTGTTTGTTAGAGGCTGTGGTGGGACTTGTGAAATCC	7	+	104606758-104606807	7qE1	Mus musculus potassium channel tetramerisation domain containing 14 (Kctd14), mRNA.			Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	D7Ertd760e	D7Ertd760e
Mus musculus	Riken	ILMN_202614	ILMN_202614	IK	ri|E430030O17|PX00100N05|AK088908|1174					AK088908	Ik		ILMN_2550952	007050475	S	780	ACACTTGTGTACTTGGTCAGGTGCGCGCTGAGATTGCCAGCAAAGAGAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	MEEBO	ILMN_222090	ILMN_222090	DBX2	scl0223843.1_155	XM_147966.3			38077133	XM_147966.3	Dbx2		ILMN_2744460	007100196	S	1560	GCTGATTGCACACTACATACCATCTGAATTTCCCACCTAGCTCGCTCACA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_211109	ILMN_211109	BC023829	scl54877.7_76	XM_135913.3			28528441	XM_135913.3	BC023829		ILMN_2612616	006110367	S	2142	CCTGCAAAGTCGAGAGCATTCTGCCTACCTGCAAGAAGAACACTGCATAC										
Mus musculus	RefSeq	ILMN_211709	ILMN_211709	CAPZA3	NM_007605.3	NM_007605.3		12344	141802827	NM_007605.3	Capza3	NP_031631.2	ILMN_2618766	004290296	S	924	CTGGCAACGGATCCTCTCTGACTTGAATCTGGTGATGTACCCCAAGTTAG	6	+	139991001-139991050	6qG2	Mus musculus capping protein (actin filament) muscle Z-line, alpha 3 (Capza3), mRNA.	A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Cappa3; Tex8; Gsg3	Cappa3; Tex8; Gsg3
Mus musculus	MEEBO	ILMN_211674	ILMN_211674	PFN4	scl0382562.1_7	XM_356571.1			38049305	XM_356571.1	Pfn4		ILMN_2618398	002850520	S	28	ATACCCTGCTGGGGACGAAACACGTGGACAGCGCAGCCCTCATCAAACTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198879	ILMN_198879	LOC244495	XM_146372.2	XM_146372.2			38089280	XM_146372.2	LOC244495		ILMN_2533247	001820647	S	3305	CGAGTAACACTGCTAACCCTGAGAATGAGTCAGAAGAGCAGTCTTCACCC										
Mus musculus	RefSeq	ILMN_210495	ILMN_210495	CNTLN	NM_175275.3	NM_175275.3		338349	87299623	NM_175275.3	Cntln	NP_780484.2	ILMN_2606198	001170180	S	4743	GCAGTGAATTGTGCTAATATCAAAGAGGGGCACTGAGTGAAGCTTACTGT	4	+	84777061-84777110	4qC4	Mus musculus centlein, centrosomal protein (Cntln), transcript variant 1, mRNA.				AI448092; B430108F07Rik	AI448092; B430108F07Rik
Mus musculus	RefSeq	ILMN_190630	ILMN_210495	CNTLN	NM_175275.3	NM_175275.3		338349	87299623	NM_175275.3	Cntln	NP_780484.2	ILMN_1240584	003940445	S	2130	CGCTGAGGTCAAGAAGAGTACTCCAGAGAAGAATGAGAAAGCAATATCGG	4	+	84692232-84692281	4qC4	Mus musculus centlein, centrosomal protein (Cntln), transcript variant 1, mRNA.				AI448092; B430108F07Rik	AI448092; B430108F07Rik
Mus musculus	MEEBO	ILMN_219784	ILMN_219784	4930573H18RIK	scl21794.4.1_7	XM_149352.1			20874892	XM_149352.1	4930573H18Rik		ILMN_1259177	003290373	S	575	AGATCTTAGCTGAGCAAAAGAGGAATGAGAGGCACTGGAGTTTCCTGCCC										
Mus musculus	RefSeq	ILMN_216599	ILMN_311849	1700025O08RIK	XM_001475484.1	XM_001475484.1		69984	149252196	XM_001475484.1	1700025O08Rik	XP_001475534.1	ILMN_1259413	001070020	S	378	CCATACAGAGAGACAAAGGAGTTGGTTTTTACTCCCAAGCCTTTTGCTAC				4qA3	PREDICTED: Mus musculus RIKEN cDNA 1700025O08 gene (1700025O08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_203054	ILMN_321326	A930002H24RIK	XM_001478480.1	XM_001478480.1		320004	149269399	XM_001478480.1	A930002H24Rik	XP_001478530.1	ILMN_1222565	000290554	S	2011	GGCCACCCCAACAAGTCCACCATAGATGTGACAAACAGAGCCAAGTAGTC				17qE1.1	PREDICTED: Mus musculus RIKEN cDNA A930002H24 gene (A930002H24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194045	ILMN_238512	ERN1	NM_023913.2	NM_023913.2		78943	15284149	NM_023913.2	Ern1	NP_076402.1	ILMN_1221898	003520128	S	3893	GTGAGTGATATGGTCCCTCTACCCCAGAGGCCAGCAGATTAGCGCATAGA	11	-	106258967-106259016	11qE1	Mus musculus endoplasmic reticulum (ER) to nucleus signalling 1 (Ern1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]	Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks [goid 4521] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16891] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	9030414B18Rik; AI225830; Ire1a; C85377; Ire1p; Ire1alpha	9030414B18Rik; AI225830; Ire1a; C85377; Ire1p; Ire1alpha
Mus musculus	MEEBO	ILMN_195332	ILMN_195332	SCL0002315.1_12	scl0002315.1_12	XM_358429.1			38073749	XM_358429.1	scl0002315.1_12		ILMN_2514631	004250440	S	4	GCTGCTGGTGTGGACGCGGACGTCGCTGGGACAGTCCCTCCCGCTGCTCG										
Mus musculus	RefSeq	ILMN_204354	ILMN_184400	USP54	NM_030180.2	NM_030180.2		78787	124053452	NM_030180.2	Usp54	NP_084456.2	ILMN_1216616	003140576	S	768	GAAGCCGAGGTAGTGTTCAAGGGATGTTCGCACCTCGGAGCTCAATGTCC	14	-	21426372-21426421	14qA3	Mus musculus ubiquitin specific peptidase 54 (Usp54), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	C030002J06Rik; AI115571; 4930429G18Rik	C030002J06Rik; AI115571; 4930429G18Rik
Mus musculus	RefSeq	ILMN_184400	ILMN_184400	USP54	NM_030180.2	NM_030180.2		78787	124053452	NM_030180.2	Usp54	NP_084456.2	ILMN_2418324	001070010	S	6190	CCATAGTCAGGATTCTGACCACGTCCTTAAGGGAAGCCCAACTGCCCAGG	14	-	21368389-21368438	14qA3	Mus musculus ubiquitin specific peptidase 54 (Usp54), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	C030002J06Rik; AI115571; 4930429G18Rik	C030002J06Rik; AI115571; 4930429G18Rik
Mus musculus	RefSeq	ILMN_244162	ILMN_244162	SPN	NM_001037810.1	NM_001037810.1		20737	83716012	NM_001037810.1	Spn	NP_001032899.1	ILMN_3163543	007400035	A	1183	AACCTGAAGGGGGAGGAAGAGCCGCTTGTGGGCAGTGAGGATGAAGCTGT	7	-	134279720-134279769	7qF3	Mus musculus sialophorin (Spn), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan [goid 1562] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence ISO]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism [goid 50688] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response [goid 1808] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell activation [goid 50868] [evidence IMP]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any part of a bacterial cell [goid 8367] [evidence ISO]; Interacting selectively with any part of a bacterial cell [goid 8367] [evidence IMP]	Cd43; Ly48; Ly-48; Galgp; A630014B01Rik	Cd43; Ly48; Ly-48; Galgp; A630014B01Rik
Mus musculus	RefSeq	ILMN_219740	ILMN_219740	PSCA	NM_028216.1	NM_028216.1		72373	21312315	NM_028216.1	Psca	NP_082492.1	ILMN_2713055	003390192	S	787	GGTGGGGGACATGCTCTCCGTTTATAGAGCTCCAGGATACAACAGTCGTG	15	+	74547426-74547475	15qD3	Mus musculus prostate stem cell antigen (Psca), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			MGC123434; 2210408B04Rik	MGC123434; 2210408B04Rik
Mus musculus	RefSeq	ILMN_212948	ILMN_212948	CLN8	NM_012000.3	NM_012000.3		26889	115270975	NM_012000.3	Cln8	NP_036130.1	ILMN_2664103	002260446	S	4948	CCACACCCCGTGTCAGTAAGATCTCATTCGTTCCACAAAGGGCTGATGCC	8	+	14900236-14900285	8qA1.1	Mus musculus ceroid-lipofuscinosis, neuronal 8 (Cln8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that modulates the size of a cell [goid 8361] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system [goid 50881] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IMP]; The process whereby neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21522] [evidence IMP]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IMP]; The uptake of L-glutamate by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters [goid 51935] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein by individual cells [goid 44257] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor [goid 51348] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]; The uptake of L-glutamate by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters [goid 51935] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, where the change varies according to the age of the cell or organism [goid 1306] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a macromolecule, any large molecule including proteins, nucleic acids and carbohydrates, as carried out by individual cells [goid 44265] [evidence IMP]		mnd	mnd
Mus musculus	Riken	ILMN_203575	ILMN_203575	H13	ri|A230084K17|PX00129H10|AK039008|1065					AK039008	H13		ILMN_1255148	005690288	S	908	CGGCATCATGCGGATGCACACAAGGTGACAAGAGTAACGATGCCTTGGAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215739	ILMN_215739	TAS2R110	NM_199155.2	NM_199155.2		387344	120587008	NM_199155.2	Tas2r110	NP_954606.2	ILMN_1231231	007210482	S	793	TACTTACTTTTTATTGTCATAGGAATGTTGAGCCTTAGGTTGATAGGAGG	6	+	132818818-132818867	6qG1	Mus musculus taste receptor, type 2, member 110 (Tas2r110), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	Tas2r10; T2R10; STC 9-1; mt2r57	Tas2r10; T2R10; STC 9-1; mt2r57
Mus musculus	RefSeq	ILMN_259192	ILMN_259192	FADS3	NM_021890.3	NM_021890.3		60527	70887800	NM_021890.3	Fads3	NP_068690.3	ILMN_3147584	002370451	A	2847	GGTGGATGGGGCTAAGTCACGTGTCTGCTAGGACTTAAGGCTGCTTGACC	19	+	10128424-10128473	19qA	Mus musculus fatty acid desaturase 3 (Fads3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water [goid 16717] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]	AI464531	AI464531
Mus musculus	RefSeq	ILMN_196557	ILMN_196557	DEFCR3	NM_007850.1	NM_007850.1		13237	13937344	NM_007850.1	Defcr3	NP_031876.1	ILMN_2691897	003930148	S	206	GAGGCTGCAAAAGAAGAGAACGCATGAATGGGACCTGCAGAAAGGGTCAT	8	+	22427886-22427935	8qA2	Mus musculus defensin related cryptdin 3 (Defcr3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defcr-3	Defcr-3
Mus musculus	RefSeq	ILMN_196557	ILMN_196557	DEFCR3	NM_007850.1	NM_007850.1		13237	13937344	NM_007850.1	Defcr3	NP_031876.1	ILMN_2524832	006620072	S	106	GGGGAAGACGACCAGGCTGTGTCTGTCTCTTTTGGAGACCCAGAAGGCTC	8	+	22427227-22427276	8qA2	Mus musculus defensin related cryptdin 3 (Defcr3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defcr-3	Defcr-3
Mus musculus	RefSeq	ILMN_196557	ILMN_196557	DEFCR3	NM_007850.1	NM_007850.1		13237	13937344	NM_007850.1	Defcr3	NP_031876.1	ILMN_1221489	000630048	S	159	TCTTCAAGAGGAATCGTTGAGAGATCTGGTATGCTATTGTAGAAAAAGAG	8	+	22427280-22427293:22427853-22427888	8qA2	Mus musculus defensin related cryptdin 3 (Defcr3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defcr-3	Defcr-3
Mus musculus	RefSeq	ILMN_211101	ILMN_211101	6330569M22RIK	NM_153563.1	NM_153563.1		229707	23956343	NM_153563.1	6330569M22Rik	NP_705791.1	ILMN_2612513	005080482	S	3067	CTTCCTGAAGCCAGAGGTGCCGGTTTCCTCTCGGTTGCCATGACCTGTAA	3	-	107415528-107415577	3qF2.3	Mus musculus RIKEN cDNA 6330569M22 gene (6330569M22Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC38111; 6530401O14Rik	MGC38111; 6530401O14Rik
Mus musculus	RefSeq	ILMN_193294	ILMN_321678	5430411C19RIK	XM_001478639.1	XM_001478639.1		71331	149269405	XM_001478639.1	5430411C19Rik	XP_001478689.1	ILMN_2495860	001190639	S	983	CCACAGGAAACCATCTTCTCCCTCTTCGTTAACTGTGGCCTCCTTCAGTA				17qE1.1	PREDICTED: Mus musculus RIKEN cDNA 5430411C19 gene (5430411C19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_186578	ILMN_237227	KCNJ15	NM_001039056.1	NM_001039056.1		16516	84794640	NM_001039056.1	Kcnj15	NP_001034145.1	ILMN_1221782	005270561	S	2198	CTGGCTGAAACCCGGCTGTGCGTGTTGCCAATATGTCCCTAAATGGTGCT	16	+	95504624-95504673	16qC4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 15 (Kcnj15), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IDA]	AI267127; 4930414N08Rik; IRKK; AI182284; Kir4.2	AI267127; 4930414N08Rik; IRKK; AI182284; Kir4.2
Mus musculus	RefSeq	ILMN_217481	ILMN_237227	KCNJ15	NM_001039056.1	NM_001039056.1		16516	84794640	NM_001039056.1	Kcnj15	NP_001034145.1	ILMN_2725845	001690072	S	2698	CGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGACTGAA	16	+	95505124-95505173	16qC4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 15 (Kcnj15), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IDA]	AI267127; 4930414N08Rik; IRKK; AI182284; Kir4.2	AI267127; 4930414N08Rik; IRKK; AI182284; Kir4.2
Mus musculus	RefSeq	ILMN_218543	ILMN_218543	OLFR154	NM_013728.1	NM_013728.1		27216	7305340	NM_013728.1	Olfr154	NP_038756.1	ILMN_2697108	001470689	S	816	GGTTGTGTCACTATTTTATACCACTGTTATCCCTATGTTGAACCCATTCA	2	-	85503724-85503773	2qD	Mus musculus olfactory receptor 154 (Olfr154), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR175-1; OR93; 912-93; Olfr4-3	MOR175-1; OR93; 912-93; Olfr4-3
Mus musculus	RefSeq	ILMN_211931	ILMN_211931	CDKL2	NM_016912.1	NM_016912.1		53886	8393079	NM_016912.1	Cdkl2	NP_058608.1	ILMN_2620886	000670551	S	1906	CCCTGTCAGATGATTCTGAGGCTGATTTGCCTCGGATGGAACACCAACAC	5|NT_114413.1	+	26492-26541	5qE2	Mus musculus cyclin-dependent kinase-like 2 (CDC2-related kinase) (Cdkl2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	KKIAMRE; AI505225; 5330436L21Rik; Kkm; MGC144031; MGC144032	KKIAMRE; AI505225; 5330436L21Rik; Kkm; MGC144031; MGC144032
Mus musculus	MEEBO	ILMN_196090	ILMN_196090	1110029L17RIK	scl9889.1.1_2						1110029L17Rik		ILMN_1213149	002060377	S	18	TCCGCGTGGACAGGACAGCTGGTGAAGCAAGCCGGATGCTCAGAACACTG										
Mus musculus	MEEBO	ILMN_223816	ILMN_223816	CNR2	scl24829.3_156				31981836	NM_009924	Cnr2		ILMN_1235201	007610743	S	3223	CCGGCCTTCCGGTGTACCAAGCAAGTGTTGTACTCCTGAGTCAGGTTTTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with cannabinoids to initiate a change in cell activity [goid 4949] [evidence IEA]		
Mus musculus	RefSeq	ILMN_254704	ILMN_254704	TBC1D8B	NM_001081499.1	NM_001081499.1		245638	125630635	NM_001081499.1	Tbc1d8b	NP_001074968.1	ILMN_2954019	002710470	S	5042	TACAGGGGAACACCAGGGCCAAAAAGTGGGAGTGGCGGGGGGAGGGTATG	X	+	136287892-136287941	XqF1	Mus musculus TBC1 domain family, member 8B (Tbc1d8b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	9030605E16Rik; 4921505D17Rik	9030605E16Rik; 4921505D17Rik
Mus musculus	RefSeq	ILMN_199984	ILMN_199984	LOC384153	XM_357450.1	XM_357450.1			38079565	XM_357450.1	LOC384153		ILMN_1227040	006840240	S	505	ACTGAAGTGGGTCCAGATGCCAGTGGGAGACAGGGCAAGATGGAGGAGGT										
Mus musculus	RefSeq	ILMN_211348	ILMN_211348	ATXN3	NM_029705.1	NM_029705.1		110616	33859735	NM_029705.1	Atxn3	NP_083981.1	ILMN_2813286	000650433	S	4355	GTCTCTAACACTGCAAAAGGAGAGCAGTGGCTCACAGTGTAACCTACGTT	12	-	102320845-102320894	12qE	Mus musculus ataxin 3 (Atxn3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Intranuclear foci at which aggregated proteins have been sequestered [goid 42405] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ATX3; 2210008M02Rik; AI647473; MJD1; ataxin-3; Mjd; Sca3	ATX3; 2210008M02Rik; AI647473; MJD1; ataxin-3; Mjd; Sca3
Mus musculus	RefSeq	ILMN_211348	ILMN_211348	ATXN3	NM_029705.1	NM_029705.1		110616	33859735	NM_029705.1	Atxn3	NP_083981.1	ILMN_2813284	003450327	S	4295	AGGCAGTGTGGATGTGCTCAGTGGTAGAGCAGTTACCTAGTGGCCCAGGC	12	-	102320905-102320954	12qE	Mus musculus ataxin 3 (Atxn3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Intranuclear foci at which aggregated proteins have been sequestered [goid 42405] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ATX3; 2210008M02Rik; AI647473; MJD1; ataxin-3; Mjd; Sca3	ATX3; 2210008M02Rik; AI647473; MJD1; ataxin-3; Mjd; Sca3
Mus musculus	RefSeq	ILMN_219036	ILMN_219036	1700029H14RIK	NM_025601.2	NM_025601.2		66501	124244071	NM_025601.2	1700029H14Rik	NP_079877.1	ILMN_3090756	006220577	A	1160	TGGGCCACAGTCCTCCTTAGTACCTCTACTGGAAGCCTAGTTCTCTCAGG	8	-	13550842-13550891	8qA1.1	Mus musculus RIKEN cDNA 1700029H14 gene (1700029H14Rik), transcript variant 1, mRNA.					
Mus musculus	RefSeq	ILMN_242038	ILMN_242038	GPRIN3	NM_183183.1	NM_183183.1		243385	34147239	NM_183183.1	Gprin3	NP_899006.1	ILMN_3005781	000540368	S	2751	AGCAAAGCTTACAGCTTGCACGAGTTCAGAAGAAATGATCGTCACTGTGG	6	-	59282338-59282387	6qB3	Mus musculus GPRIN family member 3 (Gprin3), mRNA.				C730021L23; C030038J10Rik	C730021L23; C030038J10Rik
Mus musculus	RefSeq	ILMN_184319	ILMN_184319	VPS41	NM_172120.3	NM_172120.3		218035	141801712	NM_172120.3	Vps41	NP_742118.2	ILMN_1257279	002120168	S	283	TTAGCTTGGATGACAGTGGAGAACACATGGGAGTGTGTTCAGAGGATGGC	13	+	18874538-18874587	13qA2	Mus musculus vacuolar protein sorting 41 (yeast) (Vps41), mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Vam2; mVam2; AI317346; MGC159002	Vam2; mVam2; AI317346; MGC159002
Mus musculus	RefSeq	ILMN_206114	ILMN_190852	TNKS	NM_175091.3	NM_175091.3		21951	87239973	NM_175091.3	Tnks	NP_780300.2	ILMN_1226773	006290026	S	918	GAGCCGATCCAAACATCCGGAACACCGATGGGAAATCAGCTCTGGACCTG	8	-	35981463-35981512	8qA4	Mus musculus tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase (Tnks), mRNA.		The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence ISO]		D130072O21Rik; 4930554K12Rik; AI662855; C86528	D130072O21Rik; 4930554K12Rik; AI662855; C86528
Mus musculus	RefSeq	ILMN_190852	ILMN_190852	TNKS	NM_175091.3	NM_175091.3		21951	87239973	NM_175091.3	Tnks	NP_780300.2	ILMN_1250052	000010008	S	3984	CCTAGTGACCACCCCTGGTAAAGGCCAGAGTGATTCAAACCTGCAACTGG	8	-	35894643-35894688:35894689-35894692	8qA4	Mus musculus tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase (Tnks), mRNA.		The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence ISO]		D130072O21Rik; 4930554K12Rik; AI662855; C86528	D130072O21Rik; 4930554K12Rik; AI662855; C86528
Mus musculus	RefSeq	ILMN_223311	ILMN_223311	CEPT1	NM_133869.2	NM_133869.2		99712	31559982	NM_133869.2	Cept1	NP_598630.2	ILMN_2922438	004180324	S	2594	GCAGACCTAACAGGTGTTTATACCTAGTGGAAATTGAGACCTCAATTGGC	3	-	106630445-106630494	3qF2.3	Mus musculus choline/ethanolaminephosphotransferase 1 (Cept1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Catalysis of the reaction: CDP-ethanolamine + 1,2-diacylglycerol = CMP + a phosphatidylethanolamine [goid 4307] [evidence IEA]; Catalysis of the reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine [goid 4142] [evidence IEA]	AI788721; BB118941; 9930118K05Rik	AI788721; BB118941; 9930118K05Rik
Mus musculus	RefSeq	ILMN_185811	ILMN_255749	SLC38A10	NM_024249.4	NM_024249.4		72055	142384420	NM_024249.4	Slc38a10	NP_077211.3	ILMN_2729743	007550356	S	4426	GGTCCTGTTTGGACCAGGCCATGCCCTAGTTAGTGTGCACGTTCTGCACC	11	-	119965304-119965353	11qE2	Mus musculus solute carrier family 38, member 10 (Slc38a10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218524	ILMN_218524	TAZ	NM_181516.4	NM_181516.4		66826	146198819	NM_181516.4	Taz	NP_852657.1	ILMN_2696855	005130154	S	949	GCCCTCACAGACTTCATTCAAGAGGAATTCCAGCGGCTGAAGATGCAGGC				XqA7.3	Mus musculus tafazzin (Taz), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The chemical reactions and pathways involving phosphatidylglycerols, any of a class of phospholipids in which the phosphatidyl group is esterified to the hydroxyl group of glycerol. They are important constituents of cell membranes [goid 46471] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	G4.5; XAP-2; AW552613; 9130012G04Rik; AW107266; 5031411C02Rik	G4.5; XAP-2; AW552613; 9130012G04Rik; AW107266; 5031411C02Rik
Mus musculus	RefSeq	ILMN_221806	ILMN_221806	NR3C1	NM_008173.3	NM_008173.3		14815	121247452	NM_008173.3	Nr3c1	NP_032199.3	ILMN_2740568	006770019	S	2151	GAAAAGCCATTGTCAAAAGGGAAGGAAACTCCAGTCAGAATTGGCAGCGG	18	-	39575388-39575437	18qB3	Mus musculus nuclear receptor subfamily 3, group C, member 1 (Nr3c1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any series of molecular signals generated as a consequence of a glucocorticoid binding to its receptor [goid 42921] [evidence IDA]; Any series of molecular signals generated as a consequence of a glucocorticoid binding to its receptor [goid 42921] [evidence IMP]; Any process that modulates the frequency, rate or extent of gluconeogenesis, the formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6111] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids [goid 31946] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence ISO]; The chemical reactions and pathways involving glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 8211] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Combining with a glucocorticoid to initiate a change in cell activity [goid 4883] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]	Grl1; GR; Grl-1	Grl1; GR; Grl-1
Mus musculus	RefSeq	ILMN_185823	ILMN_227130	FBXL14	NM_133940.2	NM_133940.2		101358	142356028	NM_133940.2	Fbxl14	NP_598701.1	ILMN_2623561	005340010	S	1859	TTCAAAGAAATTTGAAATCATTGTTCTTTTTTCTTTCTGCTGAGTATATT	6	+	119431655-119431704	6qF1	Mus musculus F-box and leucine-rich repeat protein 14 (Fbxl14), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW322056; Fbx14l	AW322056; Fbx14l
Mus musculus	RefSeq	ILMN_250119	ILMN_250119	OLFR121	NM_146629.2	NM_146629.2		258622	60593001	NM_146629.2	Olfr121	NP_666840.2	ILMN_2979343	006900475	S	1050	GGTAACAGAACCTTGCAGAGCTGCTGGCTAATGAAAATGTGCAATGAGCC	17	+	37889762-37889766:37889767-37889811	17qB1	Mus musculus olfactory receptor 121 (Olfr121), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC115897; MOR263-4	MGC115897; MOR263-4
Mus musculus	RefSeq	ILMN_215066	ILMN_215066	SCN4A	NM_133199.1	NM_133199.1		110880	18875343	NM_133199.1	Scn4a	NP_573462.1	ILMN_2814847	003310477	S	5729	AGGGGTTGGTCACCTTCCTGTCACTACTTTAAGAGCCCAGGTCCCCCAGC	11	-	106135502-106135551	11qE1	Mus musculus sodium channel, voltage-gated, type IV, alpha (Scn4a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Nav1.4; mH2	Nav1.4; mH2
Mus musculus	RefSeq	ILMN_184751	ILMN_259540	1500012F01RIK	NM_001081005.1	NM_001081005.1		68949	124487304	NM_001081005.1	1500012F01Rik	NP_001074474.1	ILMN_1216409	002760615	S	648	GGCTGGGGAGTAGTGGTATCATGTGCACTATTGCTGGAAATAATAAATAT	2	+	166891272-166891321	2qH3	Mus musculus RIKEN cDNA 1500012F01 gene (1500012F01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_259540	ILMN_259540	1500012F01RIK	NM_001081005.1	NM_001081005.1		68949	124487304	NM_001081005.1	1500012F01Rik	NP_001074474.1	ILMN_2939012	000540138	S	472	AAACCGGGCTTTGAATGGAGCGTGAACTCCTGAGGCGAGCATTGGCCCGA	2	+	166890674-166890687:166890688-166890717:166890934-166890939	2qH3	Mus musculus RIKEN cDNA 1500012F01 gene (1500012F01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198703	ILMN_328981	LOC434200	XR_034036.1	XR_034036.1		434200	149257521	XR_034036.1	LOC434200		ILMN_1229935	005810092	S	943	CCCTGTGCTAAGTCATGCCGTCGTCCAGCTCCAGATGTGCTCAGTTTCCC	7	-	83390024-83390073	7qD2	PREDICTED: Mus musculus similar to Thymine DNA glycosylase (LOC434200), misc RNA.					
Mus musculus	RefSeq	ILMN_226958	ILMN_226958	CXX1A	NM_024170.1	NM_024170.1		66158	21313589	NM_024170.1	Cxx1a	NP_077132.1	ILMN_2952779	001110020	S	284	CGGGCCCTGCAGTGGGTGATCCCCTACATCAAGATCGACAGCCCCCTGCT	X	-	50946526-50946575	XqA5	Mus musculus CAAX box 1 homolog A (human) (Cxx1a), mRNA.				Mart8b; Mar8.2A/B; 1110012O05Rik	Mart8b; Mar8.2A/B; 1110012O05Rik
Mus musculus	MEEBO	ILMN_224061	ILMN_224061	GM169	scl0212508.11_34				40556273	NM_199301	Gm169		ILMN_1245957	003440561	S	960	TGCTGGACCGTGACATTATACCTGCTTGCTGATGACGTTAACCCCTGGAC										
Mus musculus	MEEBO	ILMN_223981	ILMN_223981	SMAD3	scl35708.10_49				31543221	NM_016769	Smad3		ILMN_2772582	004290162	S	5010	AAGAGCCGTGTCCCCTCTTCTTATAAACGCCCTTCTAATAAACTTTTCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [evidence IDA]; Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of epithelial cell proliferation [goid 50678] [evidence IMP]; The process by which the anatomical structures of the paraxial mesoderm are generated and organized. Morphogenesis pertains to the creation of form [goid 48340] [evidence IMP]; Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51098] [evidence IDA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IGI]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]		
Mus musculus	RefSeq	ILMN_207376	ILMN_196322	0610007P08RIK	NM_023507.3	NM_023507.3		76251	91807127	NM_023507.3	0610007P08Rik	NP_075996.2	ILMN_1259789	002120736	S	1372	CTCACATCCTCTCAGCCTTGTACCTGTGGCAGTGGCCAGAAGCGCAGAAA	13	+	63945932-63945981	13qB3	Mus musculus RIKEN cDNA 0610007P08 gene (0610007P08Rik), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	RAD26L; 1700019D06Rik	RAD26L; 1700019D06Rik
Mus musculus	RefSeq	ILMN_196322	ILMN_196322	0610007P08RIK	NM_023507.3	NM_023507.3		76251	91807127	NM_023507.3	0610007P08Rik	NP_075996.2	ILMN_2816356	004610239	S	2173	GGTGTCCACAACCTCTTCAAACTAAGGTCCCAAGGGTCATGTCTTACGAG	13	+	63970424-63970473	13qB3	Mus musculus RIKEN cDNA 0610007P08 gene (0610007P08Rik), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	RAD26L; 1700019D06Rik	RAD26L; 1700019D06Rik
Mus musculus	RefSeq	ILMN_199572	ILMN_199572	LOC383668	XM_357176.1	XM_357176.1			38074480	XM_357176.1	LOC383668		ILMN_2535704	000940048	S	242	AGCTCCACAAGTCCCGAACCCAGTGGCGACAGCAGCGAGGAACAAACTTC										
Mus musculus	RefSeq	ILMN_188085	ILMN_313252	DDI1	NM_027942.1	NM_027942.1		71829	146262011	NM_027942.1	Ddi1	NP_082218.1	ILMN_1235402	002140730	S	1374	CCCTGTCAAGGGTCCTGGACGTAAAAAGCATTGAAGGAGGTCTTACATAA				9qA1	Mus musculus DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae) (Ddi1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	1700011N24Rik	1700011N24Rik
Mus musculus	RefSeq	ILMN_215051	ILMN_247475	SRCRB4D	XM_916633.2	XM_916633.2		109267	94375451	XM_916633.2	Srcrb4d	XP_921726.2	ILMN_2654947	001110484	S	1918	GGCCGAGGCCCAATCCTCTTGGACAATGTCAAATGCCGAGGAGATGAGAG				5qG2	PREDICTED: Mus musculus scavenger receptor cysteine rich domain containing, group B (4 domains), transcript variant 2 (Srcrb4d), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211401	ILMN_211401	SERPINA10	NM_144834.3	NM_144834.3		217847	133892606	NM_144834.3	Serpina10	NP_659083.2	ILMN_1259215	007160204	S	1503	CTGTACCCAGCCTGCTCGCTGTGGCTGTTCCCTGATTAACACTGAAACTA	12	-	104854902-104854951	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10 (Serpina10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	PZI; ZPI; MGC25863	PZI; ZPI; MGC25863
Mus musculus	RefSeq	ILMN_219978	ILMN_219978	AFAP1L1	NM_178928.4	NM_178928.4		106877	118130646	NM_178928.4	Afap1l1	NP_849259.2	ILMN_1246017	005900189	S	2799	CCCTGGACAGGGTTAATGGACTGGAAAATCAATGTATTCCTGCCTGCTCA	18	-	61890470-61890519	18qE1	Mus musculus actin filament associated protein 1-like 1 (Afap1l1), mRNA.				AI173486	AI173486
Mus musculus	RefSeq	ILMN_221623	ILMN_221623	PLEKHB1	NM_013746.1	NM_013746.1		27276	7305378	NM_013746.1	Plekhb1	NP_038774.1	ILMN_2933022	004830494	S	1822	GCCTGGGGAACCCCTCATGTGCCTGTCTATAGGTAGCAAGCAATCTCTCC	7	-	100518144-100518193	7qE3	Mus musculus pleckstrin homology domain containing, family B (evectins) member 1 (Plekhb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence TAS]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI315628; PHR1; Phret1; evt-1	AI315628; PHR1; Phret1; evt-1
Mus musculus	RefSeq	ILMN_219512	ILMN_219512	CACNG8	NM_133190.1	NM_133190.1		81905	21687185	NM_133190.1	Cacng8	NP_573453.1	ILMN_2709881	003290504	S	407	CGTGAAGATCAACCACTTCCCGGAGGACACGGACTACGACCACGACAGCG	7	+	3411557-3411606	7qA1	Mus musculus calcium channel, voltage-dependent, gamma subunit 8 (Cacng8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_247779	ILMN_247779	F830104D24RIK	NM_001033878.2	NM_001033878.2		233437	146219846	NM_001033878.2	F830104D24Rik	NP_001029050.2	ILMN_3161921	001240097	S	1366	GACAGAGTCAACACTGGTGTACAAGTCAGAATTCACAATCTAAGTCATGC				7qD3	Mus musculus RIKEN cDNA F830104D24 gene (F830104D24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210803	ILMN_210803	MRC1	NM_008625.1	NM_008625.1		17533	6678931	NM_008625.1	Mrc1	NP_032651.1	ILMN_1239430	004730220	S	4734	GCGTCTTAACACTGCTACACTGGTGGTAGGTCTCATGTCAACCCTGCAGA	2	+	14253066-14253115	2qA2	Mus musculus mannose receptor, C type 1 (Mrc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IDA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]	CD206; AW259686	CD206; AW259686
Mus musculus	RefSeq	ILMN_187258	ILMN_229741	ATP5C1	NM_020615.3	NM_020615.3		11949	142368640	NM_020615.3	Atp5c1	NP_065640.1	ILMN_1249783	001030338	S	838	TGACCTTGACTTTCAACCGCACCCGCCAGGCTGTCATCACAAAGGAGTTG	2	-	9980651-9980700	2qA1	Mus musculus ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 (Atp5c1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled [goid 45261] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	1700094F02Rik	1700094F02Rik
Mus musculus	Riken	ILMN_202683	ILMN_202683	A230106J09RIK	ri|A230106J09|PX00063H18|AK020717|907					AK020717	A230106J09Rik		ILMN_1233691	002070497	S	764	TGGCTGTCCAGGCGGTGACATCTGTTGCTCCAGGGATTTTAAGGTGAGGC										
Mus musculus	RefSeq	ILMN_208658	ILMN_208658	RAD51L3	NM_011235.3	NM_011235.3		19364	127139188	NM_011235.3	Rad51l3	NP_035365.1	ILMN_2755140	003290736	S	1045	GGCTGGGACACTCGGTAGCAGCCAACGCACAGTATGTCTGACCAAGTCTC	11	-	82692694-82692743	11qC	Mus musculus RAD51-like 3 (S. cerevisiae) (Rad51l3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	R51H3; DKFZp586D0122; Trad-d3; Trad-d7; Rad5113; Trad-d2; Trad-d6; Trad-d4; Rad51d	R51H3; DKFZp586D0122; Trad-d3; Trad-d7; Rad5113; Trad-d2; Trad-d6; Trad-d4; Rad51d
Mus musculus	RefSeq	ILMN_208658	ILMN_208658	RAD51L3	NM_011235.3	NM_011235.3		19364	127139188	NM_011235.3	Rad51l3	NP_035365.1	ILMN_2700664	002140328	S	402	CAGATCTCTATGAGGAACTGAAGACTTCCACGGCCATCCTGTCCACCGGC	11	-	82703201-82703250	11qC	Mus musculus RAD51-like 3 (S. cerevisiae) (Rad51l3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	R51H3; DKFZp586D0122; Trad-d3; Trad-d7; Rad5113; Trad-d2; Trad-d6; Trad-d4; Rad51d	R51H3; DKFZp586D0122; Trad-d3; Trad-d7; Rad5113; Trad-d2; Trad-d6; Trad-d4; Rad51d
Mus musculus	RefSeq	ILMN_208658	ILMN_208658	RAD51L3	NM_011235.3	NM_011235.3		19364	127139188	NM_011235.3	Rad51l3	NP_035365.1	ILMN_1228993	005420615	S	583	GCAGAATGTACTGTATGTGGATTCCAATGGAGGAATGACGGCGTCCCGCC	11	-	82697038-82697087	11qC	Mus musculus RAD51-like 3 (S. cerevisiae) (Rad51l3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	R51H3; DKFZp586D0122; Trad-d3; Trad-d7; Rad5113; Trad-d2; Trad-d6; Trad-d4; Rad51d	R51H3; DKFZp586D0122; Trad-d3; Trad-d7; Rad5113; Trad-d2; Trad-d6; Trad-d4; Rad51d
Mus musculus	RefSeq	ILMN_208658	ILMN_208658	RAD51L3	NM_011235.3	NM_011235.3		19364	127139188	NM_011235.3	Rad51l3	NP_035365.1	ILMN_2700533	003060646	S	481	TGGCCTCTATACTGGGGAGGTGACTGAAATTGTGGGTGGCCCAGGTAGCG	11	-	82697395-82697444	11qC	Mus musculus RAD51-like 3 (S. cerevisiae) (Rad51l3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	R51H3; DKFZp586D0122; Trad-d3; Trad-d7; Rad5113; Trad-d2; Trad-d6; Trad-d4; Rad51d	R51H3; DKFZp586D0122; Trad-d3; Trad-d7; Rad5113; Trad-d2; Trad-d6; Trad-d4; Rad51d
Mus musculus	RefSeq	ILMN_221190	ILMN_221190	SPHK1	NM_025367.5	NM_025367.5		20698	118130341	NM_025367.5	Sphk1	NP_079643.2	ILMN_2732199	002470341	S	152	TTACCTCTAGCAGCGCCGGGGCAGCACCGGTGGCCCCTTGTCAGCGGGAG	11	+	116395413-116395462	11qE2	Mus musculus sphingosine kinase 1 (Sphk1), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that modulates the frequency, rate, or extent of interleukin-1 beta production [goid 32651] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence ISA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the reaction: ATP + sphinganine = ADP + sphinganine 1-phosphate [goid 8481] [evidence ISA]; Catalysis of the reaction: ATP + sphinganine = ADP + sphinganine 1-phosphate [goid 8481] [evidence ISO]	1110006G24Rik; SK1	1110006G24Rik; SK1
Mus musculus	MEEBO	ILMN_185607	ILMN_185607	BAZ2A	scl38299.1.1_312				33469024	NM_054078	Baz2a		ILMN_2428464	003780433	S	17	GTCGGATGTGGTATTTTCTCAGAGTGATAGAATGGATAAGTTTCTTTGTA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_234756	ILMN_234756	OLFR591	NM_001011847.1	NM_001011847.1		258139	58801451	NM_001011847.1	Olfr591	NP_001011847.1	ILMN_2934857	002760164	S	430	GGGGCAATGGGCCTGGCTATTGTACTTCGTGGAGCAGCCTTTCTAAGTCT	7	-	110321670-110321719	7qE3	Mus musculus olfactory receptor 591 (Olfr591), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR24-1P	MOR24-1P
Mus musculus	RefSeq	ILMN_191642	ILMN_259305	SNRPB2	NM_021335.3	NM_021335.3		20639	142353628	NM_021335.3	Snrpb2	NP_067310.1	ILMN_1242348	004040091	S	964	AACCTGAAAGTGTATGAAACTCAGTAATGGGGTTTAGGTTATTTTGGAGC	2	+	142897522-142897571	2qG1	Mus musculus U2 small nuclear ribonucleoprotein B (Snrpb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2810052G09Rik	2810052G09Rik
Mus musculus	Riken	ILMN_202242	ILMN_202242	4930431J19RIK	ri|4930431J19|PX00030J04|AK015272|1171					AK015272	4930431J19Rik		ILMN_1231877	001240370	S	402	CCGACTGCGCCCTTCGCGATCCGCAGAGCAGCTTAAGAAACTTCTGTATC										
Mus musculus	RefSeq	ILMN_220664	ILMN_220664	C430003P19RIK	NM_198017.1	NM_198017.1		109359	37574118	NM_198017.1	C430003P19Rik	NP_932134.1	ILMN_2864393	002320369	S	2322	CTTAGAGACGAGATGCTGACCGTCCTGCTTTGATTGTGCCCCAGGGTCTG	7	+	140076468-140076517	7qF3	Mus musculus RIKEN cDNA C430003P19 gene (C430003P19Rik), mRNA.				AI853413; AA589499	AI853413; AA589499
Mus musculus	RefSeq	ILMN_221297	ILMN_221297	GPR37	NM_010338.1	NM_010338.1		14763	6754055	NM_010338.1	Gpr37	NP_034468.1	ILMN_1213371	000730482	S	4271	GGCTGACTGAAAGCCGAGAAACAGTGTACTTGGCATCTGATTCTGTCCAC	6	-	25634026-25634075	6qA3.1	Mus musculus G protein-coupled receptor 37 (Gpr37), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Pael-R; AI848630	Pael-R; AI848630
Mus musculus	RefSeq	ILMN_190725	ILMN_190725	ZFP533	NM_178723.3	NM_178723.3		241494	32129226	NM_178723.3	Zfp533	NP_848838.2	ILMN_2472730	000130730	S	4	CCACAGGGATTGTGTACTGTTCTAGACCCGAGTACTGTTGTACCCTGCGT	2	-	77617602-77617651	2qC3	Mus musculus zinc finger protein 533 (Zfp533), mRNA.				C130013B13Rik; B830010L13Rik	C130013B13Rik; B830010L13Rik
Mus musculus	RefSeq	ILMN_206924	ILMN_324336	LOC100045356	XM_001474126.1	XM_001474126.1		100045356	149267739	XM_001474126.1	LOC100045356	XP_001474176.1	ILMN_1232747	000460360	S	313	TCACATTCGACTCTCAGAGCGGGTGCAGGGGCAGTCTATCCTGTTTCCTG					PREDICTED: Mus musculus similar to N-methyl-D-aspartate receptor channel subunit epsilon 1 (LOC100045356), mRNA.					
Mus musculus	RefSeq	ILMN_209197	ILMN_209197	DOC2B	NM_007873.2	NM_007873.2		13447	45433554	NM_007873.2	Doc2b	NP_031899.2	ILMN_2930602	003190291	S	4019	GCCAAGTGAATCTCCCGATGCATGGACTCTGGCTGTCCTCGACACGGACT	11	-	75582768-75582817	11qB5	Mus musculus double C2, beta (Doc2b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209197	ILMN_209197	DOC2B	NM_007873.2	NM_007873.2		13447	45433554	NM_007873.2	Doc2b	NP_031899.2	ILMN_2736478	004120554	S	4126	GCAGCGCCACGAAACAATTTTTGTAATCTTGTCTGACCTTCCCAAAGGTG	11	-	75582661-75582710	11qB5	Mus musculus double C2, beta (Doc2b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_207472	ILMN_248483	HECW1	XM_897825.2	XM_897825.2		94253	94394702	XM_897825.2	Hecw1	XP_902918.1	ILMN_1260478	006370239	I	2360	ATTTGCCTTACTCCAAGACCAAGTCCAACCTGTCCCCAAGAGAGGCTCCC	13	-	14113516-14113565	13qA1	PREDICTED: Mus musculus HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1, transcript variant 3 (Hecw1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192553	ILMN_192553	6330407I18RIK	scl070710.1_171						6330407I18Rik		ILMN_2489147	000770554	S	10	GAAGCAGTAGTCATTGTTACGTGCAGACCACAGAATGAGGTGAGTTTGTA										
Mus musculus	RefSeq	ILMN_217151	ILMN_217151	E230025N22RIK	NM_172831.2	NM_172831.2		240216	89257349	NM_172831.2	E230025N22Rik	NP_766419.2	ILMN_2679635	004730372	S	1717	GCTAAGTGCCCAATACCTAGATGGTTTTTTCAGCTCTCCTGTGTTTGTGC	18	-	36844826-36844875	18qB2	Mus musculus Riken cDNA E230025N22 gene (E230025N22Rik), mRNA.					
Mus musculus	MEEBO	ILMN_189176	ILMN_189176	CATNS	scl012388.2_103				6671685	NM_007615	Catns		ILMN_2673584	007200082	S	459	CAACTGGAACGCGTCCGGGTCTCACCACAAGATGCCAACTCACTCATGGC										
Mus musculus	MEEBO	ILMN_189176	ILMN_189176	CATNS	scl012388.2_103				6671685	NM_007615	Catns		ILMN_2610460	005570026	S	4490	CCATGCTCCATTACACCCTTTTCTGTTGTAGTGAGTGTTACAGCTTGGCT										
Mus musculus	RefSeq	ILMN_218420	ILMN_218420	FNDC3B	NM_173182.1	NM_173182.1		72007	27502352	NM_173182.1	Fndc3b	NP_775274.1	ILMN_2862567	007160364	S	6320	CCCTGACACAGGAAATTCCAGGCATCTGAAGCAAACTGCCCTTTGTCCTC	3	-	27315527-27315576	3qA3	Mus musculus fibronectin type III domain containing 3B (Fndc3b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence IPI]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fad104; 1600019O04Rik; mKIAA4164; KIAA4164; AW550168	Fad104; 1600019O04Rik; mKIAA4164; KIAA4164; AW550168
Mus musculus	MEEBO	ILMN_210535	ILMN_210535	D030063F01RIK	scl0320269.2_130	NM_177122.2			31342849	NM_177122.2	D030063F01Rik		ILMN_1224418	003460553	S	1158	TCTTCTCACAGGATGACTTTTGCCTTGATACTGCTTTGATTGCTATCTGG										
Mus musculus	RefSeq	ILMN_216989	ILMN_216989	CALM1	NM_009790.4	NM_009790.4		12313	118130270	NM_009790.4	Calm1	NP_033920.1	ILMN_2677875	005960068	S	3927	CCAACTCTATGGAAATTGTAAATAAGTTTTATTTATAAACCTGGCACTGT	12	+	101447942-101447991	12qE	Mus musculus calmodulin 1 (Calm1), mRNA.		Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]	AI461935; CaM; Calm; AL024000; AI327027; AI256814	AI461935; CaM; Calm; AL024000; AI327027; AI256814
Mus musculus	MEEBO	ILMN_187890	ILMN_187890	SCL000292.1_12	scl000292.1_12	XM_127742.4			38076295	XM_127742.4	scl000292.1_12		ILMN_2447999	004040369	S	17	TCCTCTCATTGTGAAGGGCCAGCGAGAAGCAGCCAAGATCCACAACCACA										
Mus musculus	RefSeq	ILMN_209587	ILMN_209587	ARMET	NM_029103.3	NM_029103.3		74840	142365315	NM_029103.3	Armet	NP_083379.2	ILMN_2597229	000160397	S	325	CCATATCCCTGTGGAAAAGATCTGTGAGAAGCTGAAGAAGAAAGACAGCC	9	-	106792512-106792561	9qF1	Mus musculus arginine-rich, mutated in early stage tumors (Armet), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	AA408789; AA673178; AA407711; 3230402M22Rik; D18Mgi17; D17914	AA408789; AA673178; AA407711; 3230402M22Rik; D18Mgi17; D17914
Mus musculus	MEEBO	ILMN_213528	ILMN_213528	PLCB3	scl52903.34_0	NM_008874.2			31982121	NM_008874.2	Plcb3		ILMN_2637953	001090672	S	4046	CATTCACCTAAGATAGGTACTCCCCGATTCCCAAGGAGCAGCTAGTGGAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219305	ILMN_219305	NOL5A	NM_024193.2	NM_024193.2		67134	126090931	NM_024193.2	Nol5a	NP_077155.2	ILMN_1245860	006980129	S	884	GTCAGAGTATCGCCAGAGCCTACACACTTACCTTCGCTCCAAGATGAGCC	2	+	130102507-130102556	2qF1	Mus musculus nucleolar protein 5A (Nol5a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		2310044F10Rik; NOP56	2310044F10Rik; NOP56
Mus musculus	RefSeq	ILMN_223276	ILMN_223276	A830093I24RIK	NM_175431.2	NM_175431.2		207921	31341885	NM_175431.2	A830093I24Rik	NP_780640.1	ILMN_1255757	004040242	S	2802	GTTGGTTTGTTTTTCAGTAGGGATGTTGTGTGAGGGTCTCAGGATAATGG				12qA1.1	Mus musculus RIKEN cDNA A830093I24 gene (A830093I24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_230691	ILMN_230691	SNX22	NM_001025612.2	NM_001025612.2		382083	118131181	NM_001025612.2	Snx22	NP_001020783.1	ILMN_2928085	002810451	S	2409	CAGGCTGGGGGCGTGGGTGTAGAATCCTTCAGAAAAGGGCTGCTGTAACC	9	-	65913079-65913128	9qC	Mus musculus sorting nexin 22 (Snx22), mRNA.				Gm1120	Gm1120
Mus musculus	RefSeq	ILMN_201215	ILMN_230691	SNX22	NM_001025612.2	NM_001025612.2		382083	118131181	NM_001025612.2	Snx22	NP_001020783.1	ILMN_1236273	005270037	S	238	TTTCCCTCAAAACGCCTGCCCAACTGGAGGACCAGAGGACTGGAACAGCG	9	-	65916520-65916569	9qC	Mus musculus sorting nexin 22 (Snx22), mRNA.				Gm1120	Gm1120
Mus musculus	MEEBO	ILMN_216869	ILMN_216869	9430019C24RIK	scl34824.1.1_175	NM_183122.1			34147116	NM_183122.1	9430019C24Rik		ILMN_2676272	001570477	S	954	GGCAGTGGGGAAGACCATTTCCTAGATGGTGTCTATAGGAGTTTTATACT										
Mus musculus	RefSeq	ILMN_199620	ILMN_199620	LOC383748	XM_357221.1	XM_357221.1			38075295	XM_357221.1	LOC383748		ILMN_1230061	004670025	S	7136	CAAGCTCTGTGATTGGTCGGCTTGGTAGCGCTGATGAGTGTGGGTGGGAC										
Mus musculus	MEEBO	ILMN_193852	ILMN_193852	DNAJC5	scl19763.10.1_1				46519174	NM_016775	Dnajc5		ILMN_2501026	000580706	S	10	CAGAGAACCTGTGGGCCGTGAGCATCCTACTTTGGCTTTCAGTGCACCTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215528	ILMN_215528	GHITM	NM_078478.3	NM_078478.3		66092	146149213	NM_078478.3	Ghitm	NP_510963.1	ILMN_1231264	001770044	S	2241	CCTTGGGAAGTATTTGAATGAAAACTGGAATGGGGAGGTGCTCAGCTTCC				14qB	Mus musculus growth hormone inducible transmembrane protein (Ghitm), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			PTD010; C77840; 1010001P14Rik	PTD010; C77840; 1010001P14Rik
Mus musculus	RefSeq	ILMN_198001	ILMN_198001	LOC333751	XM_289869.2	XM_289869.2			38080184	XM_289869.2	LOC333751		ILMN_2530127	003520576	S	1216	TGCTGGCGAGGATGTGGAGAAAGGGGAACACTCCTCCATTGTTGGTGGGA										
Mus musculus	RefSeq	ILMN_197587	ILMN_197587	LOC381457	XM_355410.1	XM_355410.1			38076702	XM_355410.1	LOC381457		ILMN_2528652	007510491	S	1309	TGCATGGGGCAAAGCTGGACACCAGTAAGCAACTATGAGACAGAAGAGTC										
Mus musculus	RefSeq	ILMN_213615	ILMN_213615	SUNC1	NM_177576.3	NM_177576.3		194974	141802215	NM_177576.3	Sunc1	NP_808244.1	ILMN_1222836	006020050	S	1080	TTTCCTTACGTCAGATTGCACCCCTAAGAATCAAAGATTGGGAGTGGGAG	11	-	8916132-8916181	11qA1	Mus musculus Sad1 and UNC84 domain containing 1 (Sunc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-219P13.2; MGC130135; D630047F21Rik	RP23-219P13.2; MGC130135; D630047F21Rik
Mus musculus	MEEBO	ILMN_213520	ILMN_213520	AI854517	scl32497.13_286				51749664	XM_489189	AI854517		ILMN_1228099	004010504	S	3828	AGAGACTTCTGCCTTCAAGGTTCCCCCAGTATCTTGCCTGGGGTCTTCCC										
Mus musculus	RefSeq	ILMN_195145	ILMN_255747	COBL	NM_172496.2	NM_172496.2		12808	32441275	NM_172496.2	Cobl	NP_766084.2	ILMN_2698288	004210326	S	1370	CCTTTCCTGGGGAAGGCGCTGGTTCCGAGACCTCAGAGCTGAGACCCAAA	11	-	12206961-12207010	11qA1	Mus musculus cordon-bleu (Cobl), mRNA.		The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4732460E13; mKIAA0633; C530045F18Rik	4732460E13; mKIAA0633; C530045F18Rik
Mus musculus	RefSeq	ILMN_255747	ILMN_255747	COBL	NM_172496.2	NM_172496.2		12808	32441275	NM_172496.2	Cobl	NP_766084.2	ILMN_2951682	000050292	S	4966	GGCCAGAGAGCAGAGTGTTGAGGACCTATATGTAGCAGAGGGCAGTCCAC	11	-	12137121-12137170	11qA1	Mus musculus cordon-bleu (Cobl), mRNA.		The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4732460E13; mKIAA0633; C530045F18Rik	4732460E13; mKIAA0633; C530045F18Rik
Mus musculus	Riken	ILMN_206601	ILMN_206601	E030022I04RIK	ri|E030022I04|PX00205I14|AK087046|2449					AK087046	E030022I04Rik		ILMN_1221950	004180072	S	2260	CTTCCAGCTTCACCAGGGCTGGCACTAAAGGCGTGGTGCACATCAGTGTG										
Mus musculus	RefSeq	ILMN_187510	ILMN_187510	UPP1	NM_009477.1	NM_009477.1		22271	6678514	NM_009477.1	Upp1	NP_033503.1	ILMN_2959293	003520594	S	928	GGCAAGGCCGTCTGGATGGCGCCCTCTGCTCCTACACAGAGAAAGACAAA	11	+	9035168-9035217	11qA1	Mus musculus uridine phosphorylase 1 (Upp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways involving a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6220] [evidence IMP]; The chemical reactions and pathways involving uridine, uracil riboside, a ribonucleoside very widely distributed but occurring almost entirely as phosphoric esters in ribonucleotides and ribonucleic acids [goid 46108] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: uridine + phosphate = uracil + alpha-D-ribose 1-phosphate [goid 4850] [evidence IDA]	UdRPase; Upp; UPase; AI325217; Up	UdRPase; Upp; UPase; AI325217; Up
Mus musculus	RefSeq	ILMN_187510	ILMN_187510	UPP1	NM_009477.1	NM_009477.1		22271	6678514	NM_009477.1	Upp1	NP_033503.1	ILMN_2959292	004120243	S	853	TGCAGTGCTCCTCAGACCTGAATGAGTTCCCCATGGTTGTGGGCAACACC	11	+	9034861-9034910	11qA1	Mus musculus uridine phosphorylase 1 (Upp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways involving a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6220] [evidence IMP]; The chemical reactions and pathways involving uridine, uracil riboside, a ribonucleoside very widely distributed but occurring almost entirely as phosphoric esters in ribonucleotides and ribonucleic acids [goid 46108] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: uridine + phosphate = uracil + alpha-D-ribose 1-phosphate [goid 4850] [evidence IDA]	UdRPase; Upp; UPase; AI325217; Up	UdRPase; Upp; UPase; AI325217; Up
Mus musculus	RefSeq	ILMN_187510	ILMN_187510	UPP1	NM_009477.1	NM_009477.1		22271	6678514	NM_009477.1	Upp1	NP_033503.1	ILMN_2959291	001050095	S	1100	GGACCGTCTGCAAGGAGACCAGATCAACACTCCCCACGATGTGCTTGTGG	11	+	9035990-9036039	11qA1	Mus musculus uridine phosphorylase 1 (Upp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways involving a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6220] [evidence IMP]; The chemical reactions and pathways involving uridine, uracil riboside, a ribonucleoside very widely distributed but occurring almost entirely as phosphoric esters in ribonucleotides and ribonucleic acids [goid 46108] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: uridine + phosphate = uracil + alpha-D-ribose 1-phosphate [goid 4850] [evidence IDA]	UdRPase; Upp; UPase; AI325217; Up	UdRPase; Upp; UPase; AI325217; Up
Mus musculus	RefSeq	ILMN_199473	ILMN_199473	LOC383535	XM_357110.1	XM_357110.1			38049703	XM_357110.1	LOC383535		ILMN_1260288	007550504	S	19	TGCAAAGAAGAGAGCGGTAGGAAAGCCCAAGCCCTTGAACAAGACACTCC										
Mus musculus	RefSeq	ILMN_195926	ILMN_257999	5330401P04RIK	NM_172654.2	NM_172654.2		227094	142368519	NM_172654.2	5330401P04Rik	NP_766242.1	ILMN_1220874	007550669	S	1905	CTTCATGTGCAGGTTCAGGGCTGTCTCGCTCTAGCCTTGGTCTCATGGTG	1	+	52707362-52707411	1qC1.1	Mus musculus RIKEN cDNA 5330401P04 gene (5330401P04Rik), mRNA.				9830163O08	9830163O08
Mus musculus	RefSeq	ILMN_222637	ILMN_222637	CCRL2	NM_017466.4	NM_017466.4		54199	142370308	NM_017466.4	Ccrl2	NP_059494.2	ILMN_2752624	005130156	S	1762	ACTCTTCCTCTTTAGCGTTTGTCCGCAGTGTGGGCGTGGGCGGTGTGCAT	9	-	110957637-110957686	9qF3	Mus musculus chemokine (C-C motif) receptor-like 2 (Ccrl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence ISS]	Cmkbr1l2; L-CCR; 1810047I05Rik; E01; CCR11	Cmkbr1l2; L-CCR; 1810047I05Rik; E01; CCR11
Mus musculus	RefSeq	ILMN_198857	ILMN_198857	LOC331259	XM_285690.2	XM_285690.2			38089114	XM_285690.2	LOC331259		ILMN_1243342	002900020	S	720	GCGTGGTGTTCACTTTCTCACAGACCACATGAGTCAGGTCTTCAGGTGCC										
Mus musculus	RefSeq	ILMN_221303	ILMN_221303	CYSLTR2	NM_133720.2	NM_133720.2		70086	142362508	NM_133720.2	Cysltr2	NP_598481.1	ILMN_2733683	004040047	S	1662	CACTCAGAGTCTCCAACTTACTTTATATTTGCATCCTAACCAACAAGTTG	14	-	73428983-73429032	14qD3	Mus musculus cysteinyl leukotriene receptor 2 (Cysltr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a leukotriene to initiate a change in cell activity. Leukotrienes are pharmacologically active substances with a set of three conjugated double bonds; some contain a peptide moiety based on cysteine [goid 4974] [evidence IEA]; Combining with a cysteinyl leukotriene to initiate a change in cell activity. Cysteinyl leukotrienes are leukotrienes that contain a peptide moiety based on cysteine [goid 1631] [evidence IDA]	2300001H05Rik; Cyslt2; Cltr2; CYSLT2R	2300001H05Rik; Cyslt2; Cltr2; CYSLT2R
Mus musculus	RefSeq	ILMN_245250	ILMN_245250	HIST1H2BM	NM_178200.1	NM_178200.1		319186	30061384	NM_178200.1	Hist1h2bm	NP_835507.1	ILMN_2891646	002230619	S	225	AGGCGAGGCTTCCCGCCTGGCGCATTACAACAAGCGCTCGACCATCACGT	13	+	21814191-21814240	13qA3.1	Mus musculus histone cluster 1, H2bm (Hist1h2bm), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2b-291b	H2b-291b
Mus musculus	RefSeq	ILMN_220389	ILMN_220389	CRHR2	NM_009953.2	NM_009953.2		12922	141801877	NM_009953.2	Crhr2	NP_034083.1	ILMN_2721406	000780270	S	2144	CCTGGGGAAGAAGGGTGAGGATCCCCCAAATCAGAGTATGCCTGGGAGTG	6	-	55040502-55040551	6qB3	Mus musculus corticotropin releasing hormone receptor 2 (Crhr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IDA]; Combining with the corticotrophin-releasing factor family of ligands, including the urocortins, to initiate a change in cell activity [goid 15056] [evidence IDA]	CRFR2beta; CRFR2alpha; Crfr2; CRF-R2	CRFR2beta; CRFR2alpha; Crfr2; CRF-R2
Mus musculus	RefSeq	ILMN_222923	ILMN_222923	B3GNT5	NM_054052.2	NM_054052.2		108105	31542176	NM_054052.2	B3gnt5	NP_473393.2	ILMN_1216368	004490189	S	3711	CTCACCAATTGGCCCTTTGCTAGCTGCTGGCTTTAGGTACACATAGGATA	16	+	19772009-19772058	16qA3	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 (B3gnt5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + lipopolysaccharide = UDP + N-acetyl-D-glucosaminyl-lipopolysaccharide [goid 8917] [evidence IDA]	beta3GnT5	beta3GnT5
Mus musculus	RefSeq	ILMN_200716	ILMN_200716	LOC383466	XM_357081.1	XM_357081.1			38085409	XM_357081.1	LOC383466		ILMN_1232091	007100681	S	33	GGGCTCAGTCTCCAGCAGTGGGGAGAAGGGACTAACTTTTTGTTGCCGTG										
Mus musculus	RefSeq	ILMN_218576	ILMN_218576	STK38L	NM_172734.2	NM_172734.2		232533	31982109	NM_172734.2	Stk38l	NP_766322.1	ILMN_2794051	006450438	S	4451	CAGCGTTTCGAAGACTGTTGGGCAGGGGCATTGAGGGCCTCTTCATTCAC	6	+	146727248-146727297	6qG3	Mus musculus serine/threonine kinase 38 like (Stk38l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISA]; Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope [goid 51128] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	B230328I19; Ndr2; 4930473A22Rik; Ndr54	B230328I19; Ndr2; 4930473A22Rik; Ndr54
Mus musculus	RefSeq	ILMN_187287	ILMN_249101	SNAPC3	NM_029949.3	NM_029949.3		77634	148747596	NM_029949.3	Snapc3	NP_084225.1	ILMN_1214738	003520070	S	654	TTGCTGTGTCAGTGACCTCCAGATCGGTGGAGAATTCAGCAACGCGCCAG				4qC3	Mus musculus small nuclear RNA activating complex, polypeptide 3 (Snapc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1810020H02Rik; E030018J20Rik; 5031401C21Rik; AI414457; 4930558A07Rik	1810020H02Rik; E030018J20Rik; 5031401C21Rik; AI414457; 4930558A07Rik
Mus musculus	RefSeq	ILMN_187287	ILMN_249101	SNAPC3	NM_029949.3	NM_029949.3		77634	148747596	NM_029949.3	Snapc3	NP_084225.1	ILMN_1213437	003370167	S	1289	GGGGTTGTTAATGGCGTTTTACTTAAGTTGTTTATGTTACTGAGATGTAG				4qC3	Mus musculus small nuclear RNA activating complex, polypeptide 3 (Snapc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1810020H02Rik; E030018J20Rik; 5031401C21Rik; AI414457; 4930558A07Rik	1810020H02Rik; E030018J20Rik; 5031401C21Rik; AI414457; 4930558A07Rik
Mus musculus	Riken	ILMN_201799	ILMN_201799	2310045K21RIK	ri|2310045K21|ZX00059J03|AK009823|799					AK009823	2310045K21Rik		ILMN_2544674	002190615	S	653	AGCAGAGCACTGGCTTGATTATTTCCCACCACTGGCCGTTCAGGATCTGA										
Mus musculus	Riken	ILMN_206134	ILMN_206134	PFTK1	ri|C630032H13|PX00084N05|AK083269|2435					AK083269	Pftk1		ILMN_1258794	002570324	S	2200	CACCCAGGAGTCTTTATGGCAGTTCAACCTGTGAGCGGAACACCGGACGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]		
Mus musculus	RefSeq	ILMN_197278	ILMN_197278	LOC228238	XM_141127.3	XM_141127.3			38074939	XM_141127.3	LOC228238		ILMN_1218304	003140369	S	1380	CATGCTGCCCAGCCTGGAAGCCTGGAAGCAGCCTGTATCTGAGGCTTTAA										
Mus musculus	MEEBO	ILMN_212106	ILMN_212106	OLFM1	scl0003387.1_1121	NM_019498.1			9506928	NM_019498.1	Olfm1		ILMN_1223561	003850446	S	6	CGGAGCGCGCGGGGACGCTGCAGCGGCGGGCAGCGCGGGCAGGCAGCGCG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218647	ILMN_218647	A630042L21RIK	NM_134134.2	NM_134134.2		106894	145279238	NM_134134.2	A630042L21Rik	NP_598895.2	ILMN_1246992	004050324	S	5020	ATTGAGAGGGTGGGATAGGTGGCTTTCCCTCTCGTTCTTCCCCCAACAAG				18qE1	Mus musculus RIKEN cDNA A630042L21 gene (A630042L21Rik), transcript variant 2, mRNA.				2510002C16Rik; AI413166; mKIAA0194	2510002C16Rik; AI413166; mKIAA0194
Mus musculus	RefSeq	ILMN_198646	ILMN_259506	1700039E15RIK	NM_001033176.1	NM_001033176.1		76713	85701685	NM_001033176.1	1700039E15Rik	NP_001028348.1	ILMN_2532423	003840021	S	1081	CCCCCGGAGAACTTCCTTCACCCCCAGACCCTGATAACAAAAAAGGACAG	7	+	52543712-52543761	7qB4	Mus musculus RIKEN cDNA 1700039E15 gene (1700039E15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]		
Mus musculus	RefSeq	ILMN_259506	ILMN_259506	1700039E15RIK	NM_001033176.1	NM_001033176.1		76713	85701685	NM_001033176.1	1700039E15Rik	NP_001028348.1	ILMN_2958222	005360020	S	1369	CCTTTAGCACAGGCAAGGCCCCACGGAAAGCAAAAGACAGGGTATGCAGA	7	+	52544000-52544049	7qB4	Mus musculus RIKEN cDNA 1700039E15 gene (1700039E15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213625	ILMN_213625	HMGN2	NM_016957.3	NM_016957.3		15331	86198321	NM_016957.3	Hmgn2	NP_058653.1	ILMN_2862111	000610600	S	894	GGGGACTTTGCAGTGACTTCATTGAGTGTTCTCAAAAGAGCACTGGTTCC	4	-	133520964-133521013	4qD3	Mus musculus high mobility group nucleosomal binding domain 2 (Hmgn2), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC103384; MGC102472; MGC103137; MGC118420; Hmg17; HMG-17	MGC103384; MGC102472; MGC103137; MGC118420; Hmg17; HMG-17
Mus musculus	RefSeq	ILMN_223488	ILMN_223488	PSMC2	NM_011188.1	NM_011188.1		19181	33859603	NM_011188.1	Psmc2	NP_035318.1	ILMN_2918018	004390672	S	1662	CGCCAAATTCAGCGCTACTCCCCGCTACATGACATACAATTGAGCCCCAG	5	+	21315488-21315528:21315529-21315537	5qA3	Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 2 (Psmc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_223488	ILMN_223488	PSMC2	NM_011188.1	NM_011188.1		19181	33859603	NM_011188.1	Psmc2	NP_035318.1	ILMN_2764737	004640128	S	1164	CGAATGGTTCGTGAGCTTTTTGAAATGGCCAGGACAAAAAAAGCCTGCCT	5	+	21314357-21314406	5qA3	Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 2 (Psmc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198733	ILMN_198733	LOC272417	XM_195679.2	XM_195679.2			38087159	XM_195679.2	LOC272417		ILMN_1242624	003710338	S	46	AGCAGCTTGGACCCTGTGTGCAAAGAGGATGCTGAGGAGTGAACTTACCC										
Mus musculus	MEEBO	ILMN_223920	ILMN_223920	LY78	scl017079.3_90				6678753	NM_008533	Ly78		ILMN_1236393	003800072	S	2311	CCTCCAGTGAGAAGCGACCCACAGTCAGCTCTACCCATCTGAGAAAGAAG										
Mus musculus	RefSeq	ILMN_192944	ILMN_195014	TTC17	NM_183106.2	NM_183106.2		74569	124430550	NM_183106.2	Ttc17	NP_898929.2	ILMN_1240429	004230112	S	2293	CCCCTGGACAACAGCCATGACAAACAGAAATACTTTGCCAAGCCACAGTC	2	-	94182887-94182936	2qE1	Mus musculus tetratricopeptide repeat domain 17 (Ttc17), mRNA.				9130020K17Rik; D2Bwg1005e	9130020K17Rik; D2Bwg1005e
Mus musculus	RefSeq	ILMN_195014	ILMN_195014	TTC17	NM_183106.2	NM_183106.2		74569	124430550	NM_183106.2	Ttc17	NP_898929.2	ILMN_2511768	003290088	S	4480	CCCATACAGTGCCCTCATCTTTGGTCCCTGGAGAATCAAAAACTCCAACA	2	-	94140984-94141033	2qE1	Mus musculus tetratricopeptide repeat domain 17 (Ttc17), mRNA.				9130020K17Rik; D2Bwg1005e	9130020K17Rik; D2Bwg1005e
Mus musculus	Riken	ILMN_204181	ILMN_204181	A830038O22RIK	ri|A830038O22|PX00155K10|AK043836|1925					AK043836	A830038O22Rik		ILMN_1222701	005220717	S	1592	CATGACGCACAGGCGGTGACATTAAGTGAGTGACCTCACACCACACCGTG										
Mus musculus	RefSeq	ILMN_198994	ILMN_311962	LOC100039660	XM_001473279.1	XM_001473279.1		100039660	149260647	XM_001473279.1	LOC100039660	XP_001473329.1	ILMN_1226246	002070725	S	2546	CCTACCAGTTCACCGCATCAGTGGCCCTTCCCAGGCTGCTCATAGAAGAC	10	-	17850414-17850463	10qA3	PREDICTED: Mus musculus hypothetical protein LOC100039660 (LOC100039660), mRNA.					
Mus musculus	MEEBO	ILMN_192010	ILMN_192010	MJ-1000-55_462	MJ-1000-55_462						MJ-1000-55_462		ILMN_1253751	002140180	S	1	GGAGCTAAGGTTTTGCATCCAAGAACTATAGAGCCAGCTATGGAGAAGGG										
Mus musculus	RefSeq	ILMN_199534	ILMN_199534	LOC382699	XM_356630.1	XM_356630.1			38074052	XM_356630.1	LOC382699		ILMN_1223950	003120128	S	390	CAGTGAAATGCTGGAGATAGTGCAGAGCACCCTCACAGATGCCCCTTTGC										
Mus musculus	Riken	ILMN_202481	ILMN_202481	6330583M11RIK	ri|6330583M11|PX00044L21|AK018261|1337					AK018261	6330583M11Rik		ILMN_1247361	002970576	S	1021	GGTGGGCATCTGTCTTTCTGTCTGTGGAGAGTCTGGTTTGTGGTTGCACG										
Mus musculus	RefSeq	ILMN_231343	ILMN_231343	MARCH4	NM_001045533.1	NM_001045533.1		381270	113865912	NM_001045533.1	March4	NP_001038998.1	ILMN_2793827	004060689	S	3449	GCCTTCAAAGCTGTCAGGCCAGGGATGATTTTCCTCATTACTGAGCCCCG	1	-	72474374-72474423	1qC3	Mus musculus membrane-associated ring finger (C3HC4) 4 (March4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC056494; KIAA1399; mKIAA1399	BC056494; KIAA1399; mKIAA1399
Mus musculus	RefSeq	ILMN_196918	ILMN_231343	MARCH4	NM_001045533.1	NM_001045533.1		381270	113865912	NM_001045533.1	March4	NP_001038998.1	ILMN_1227882	003420026	S	3988	CTGCCAGGGAAGGCCACTGGGTGGTCACCTGCAGAGTTTCTTACTGTCAT	1	-	72473835-72473884	1qC3	Mus musculus membrane-associated ring finger (C3HC4) 4 (March4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC056494; KIAA1399; mKIAA1399	BC056494; KIAA1399; mKIAA1399
Mus musculus	Riken	ILMN_204658	ILMN_204658	9330175K08RIK	ri|9330175K08|PX00106N23|AK034306|3249					AK034306	9330175K08Rik		ILMN_2566658	005560239	S	3044	CACTTGTGAGCATCCTACGTACAGACTTGTTGGAACAGTGGAGAGTTTGC										
Mus musculus	MEEBO	ILMN_185410	ILMN_185410	SCL0003723.1_3	scl0003723.1_3	AK046853.1			26338451	AK046853.1	scl0003723.1_3		ILMN_2426818	007650608	S	11	TGCTCGGAAGATGGCGCTGTGCGCATGTGGGAGGTCCGAGAAAAACAGCA										
Mus musculus	RefSeq	ILMN_216377	ILMN_216377	OLFR1466	NM_146694.1	NM_146694.1		258689	33239139	NM_146694.1	Olfr1466	NP_666905.1	ILMN_2920992	003130220	S	684	GATGCACTCAGAAGCAGGAGTTCAGAAGGCTCTTTCCACTTGTGCTTCCC	19	+	13416933-13416982	19qA	Mus musculus olfactory receptor 1466 (Olfr1466), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-12	MOR202-12
Mus musculus	MEEBO	ILMN_222615	ILMN_222615	LOC381782	IGKV4-50_AJ235938_Ig_kappa_variable_4-50_15	XM_355781.1			38084346	XM_355781.1	LOC381782		ILMN_2752325	004890176	S	63	TGCTAATCAGTATCTCAGTTGTAATGTCCAGAGGAGAAAATGTGCTCACC										
Mus musculus	MEEBO	ILMN_218857	ILMN_218857	CALR	scl34557.8_242	NM_007591.2			31982485	NM_007591.2	Calr		ILMN_1233820	003520356	S	2045	CTCATAGACGTGTAAGTTTTGATTCTAGCACAGACCTCATTGACAGACTG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that modulates the frequency, rate or extent of meiosis, the process by which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes [goid 40020] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]		
Mus musculus	RefSeq	ILMN_254847	ILMN_254847	4632411B12RIK	NM_172652.1	NM_172652.1		226976	27369929	NM_172652.1	4632411B12Rik	NP_766240.1	ILMN_2815545	001660520	S	4314	GGAGGTGACTGGAGTCTGTAGACCATGTTCCTCGGGTCCCATCTCAAACC	1	-	36280575-36280624	1qB	Mus musculus RIKEN cDNA 4632411B12 gene (4632411B12Rik), mRNA.				AI647574; C85723; mKIAA1310; AI431067; 4932435K23	AI647574; C85723; mKIAA1310; AI431067; 4932435K23
Mus musculus	RefSeq	ILMN_207009	ILMN_194359	UGT8A	NM_011674.4	NM_011674.4		22239	142371293	NM_011674.4	Ugt8a	NP_035804.2	ILMN_2584359	005910110	S	66	TCTCCAACTCCCGCGCGGCAGCCGAAGGACGCGCTATGAAGTCTTACACT	3	-	125618362-125618377:125618378-125618379:125641371-125641402	3qG1	Mus musculus UDP galactosyltransferase 8A (Ugt8a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycolipid, a compound containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid [goid 9247] [evidence TAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-galactose + 2-(2-hydroxyacyl)sphingosine = UDP + 1-(beta-D-galactosyl)-2-(2-hydroxyacyl)sphingosine [goid 3851] [evidence IEA]; Catalysis of the reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine [goid 8120] [evidence TAS]	Ugt8; Cgt; AW455908; AI850488; mCerGT	Ugt8; Cgt; AW455908; AI850488; mCerGT
Mus musculus	RefSeq	ILMN_194359	ILMN_194359	UGT8A	NM_011674.4	NM_011674.4		22239	142371293	NM_011674.4	Ugt8a	NP_035804.2	ILMN_1239557	002570228	S	2697	CCCATTTGTGCAAATGAGTTTCCATTCCCTCCTCACTACATCAGCCCAAC	3	-	125569113-125569162	3qG1	Mus musculus UDP galactosyltransferase 8A (Ugt8a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycolipid, a compound containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid [goid 9247] [evidence TAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-galactose + 2-(2-hydroxyacyl)sphingosine = UDP + 1-(beta-D-galactosyl)-2-(2-hydroxyacyl)sphingosine [goid 3851] [evidence IEA]; Catalysis of the reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine [goid 8120] [evidence TAS]	Ugt8; Cgt; AW455908; AI850488; mCerGT	Ugt8; Cgt; AW455908; AI850488; mCerGT
Mus musculus	RefSeq	ILMN_258260	ILMN_258260	GSTP2	NM_181796.2	NM_181796.2		14869	45597456	NM_181796.2	Gstp2	NP_861461.1	ILMN_2917386	004920450	S	16	CTATTCAGCACTTGATCCCCACTTCTCTCTGCACAGCAGCCATGCCGCCG	19	-	4041930-4041938:4042165-4042165:4042166-4042205	19qA	Mus musculus glutathione S-transferase, pi 2 (Gstp2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IDA]	Gst3; GSTpiA; Gst-3	Gst3; GSTpiA; Gst-3
Mus musculus	RefSeq	ILMN_189803	ILMN_189803	WDR40A	NM_026893.2	NM_026893.2		68970	31541821	NM_026893.2	Wdr40a	NP_081169.2	ILMN_1248522	001190221	S	3047	CCGTAGGACACAGCATCCTCCACAGGTTTTAGAATAATCATCCTATAATC	4	-	41238605-41238654	4qA5	Mus musculus WD repeat domain 40A (Wdr40a), mRNA.				AI851081; 5830424K06Rik; 1500001L20Rik; AA420338	AI851081; 5830424K06Rik; 1500001L20Rik; AA420338
Mus musculus	RefSeq	ILMN_195380	ILMN_195380	TRIM59	NM_025863.2	NM_025863.2		66949	29648306	NM_025863.2	Trim59	NP_080139.2	ILMN_2515081	005220056	S	2640	CGGAAACTTCTATTTCAGTATGCCCAGTATTACATTGTAGGCTTGACGAT	3	-	68839364-68839413	3qE1	Mus musculus tripartite motif-containing 59 (Trim59), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mrf1; 2700022F13Rik; TSBF1; 2310035M22Rik	Mrf1; 2700022F13Rik; TSBF1; 2310035M22Rik
Mus musculus	RefSeq	ILMN_195380	ILMN_195380	TRIM59	NM_025863.2	NM_025863.2		66949	29648306	NM_025863.2	Trim59	NP_080139.2	ILMN_2993661	007570196	S	2546	GAGATGAGGAAACAAAAGTGCCAGTGTTAGCAGGTGGGAAAGCTCATTCT	3	-	68839458-68839507	3qE1	Mus musculus tripartite motif-containing 59 (Trim59), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mrf1; 2700022F13Rik; TSBF1; 2310035M22Rik	Mrf1; 2700022F13Rik; TSBF1; 2310035M22Rik
Mus musculus	RefSeq	ILMN_221830	ILMN_221830	ZFP335	NM_199027.2	NM_199027.2		329559	124517713	NM_199027.2	Zfp335	NP_950192.2	ILMN_1243052	001980709	S	4089	ATCCAGTATGTACCTGTCTCCCCCAGCCAGCAGCTTGTCACCCAGGCTCA	2	-	164717911-164717960	2qH3	Mus musculus zinc finger protein 335 (Zfp335), mRNA. XM_986923 XM_986960				MGC86001; Znf335; 1810045J01Rik; Nif1	MGC86001; Znf335; 1810045J01Rik; Nif1
Mus musculus	RefSeq	ILMN_215617	ILMN_215617	TFIP11	NM_018783.4	NM_018783.4		54723	118130732	NM_018783.4	Tfip11	NP_061253.2	ILMN_2961179	006200291	S	2699	AGCAGCTCTACACCTTCGGCCGCATCGTCATCTACATTGACCGGGGTGTG	5	+	112766243-112766292	5qF	Mus musculus tuftelin interacting protein 11 (Tfip11), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tip39; TIP33; AW046167; AF097181; 2810002G02Rik; Srr1	Tip39; TIP33; AW046167; AF097181; 2810002G02Rik; Srr1
Mus musculus	RefSeq	ILMN_197309	ILMN_197309	LOC218438	XM_138788.1	XM_138788.1			20909183	XM_138788.1	LOC218438		ILMN_2527668	003610209	S	265	GTCACCACTGTGATTGGAGGGATGGCATCACAGGCTGTCACCACTGCACT										
Mus musculus	RefSeq	ILMN_224230	ILMN_232318	DEFB8	NM_153108.4	NM_153108.4		244334	147899923	NM_153108.4	Defb8	NP_694748.3	ILMN_2776992	004880592	S	91	TGATCCAGTAACTTACATTCGAAACGGAGGCATATGCCAGTATCGGTGCA				8qA1.3	Mus musculus defensin beta 8 (Defb8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]		Defr1; mBD8	Defr1; mBD8
Mus musculus	Riken	ILMN_203184	ILMN_203184	A430109E24RIK	ri|A430109E24|PX00065A15|AK040613|2839					AK040613	A430109E24Rik		ILMN_2555364	000540541	S	2228	CCACCACGGAGGCTGTGGAAGGTTTTTGCTGAGGTTATCCCGTGTCAGTG										
Mus musculus	RefSeq	ILMN_221939	ILMN_221939	OLFR1036	NM_207142.1	NM_207142.1		258245	46369492	NM_207142.1	Olfr1036	NP_997025.1	ILMN_2742382	005910326	S	774	GAGAAGGCCAACGGAGGAGTCTGTGGAGCAGGGAAAGATGGTTGCTGTCT	2	+	85915672-85915721	2qD	Mus musculus olfactory receptor 1036 (Olfr1036), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR262-13; MOR245-25	MOR262-13; MOR245-25
Mus musculus	RefSeq	ILMN_209861	ILMN_209861	OLFR1168	NM_146531.1	NM_146531.1		258524	33239193	NM_146531.1	Olfr1168	NP_666742.1	ILMN_1233533	001780403	S	615	GGGTAGTAGCCTTCTTATCACTATGGCCTCCTATGTCTTCATCGTTGTCA	2	+	88025650-88025699	2qD	Mus musculus olfactory receptor 1168 (Olfr1168), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR174-13; MGC123637	MOR174-13; MGC123637
Mus musculus	RefSeq	ILMN_220953	ILMN_220953	OLFR1128	NM_146349.1	NM_146349.1		258346	22129599	NM_146349.1	Olfr1128	NP_666461.1	ILMN_1225269	000780129	S	594	GCTCTTTATATTTAGTACACTCGTGATAGGGTGTAGCATTTTCCACATCC	2	-	87385056-87385105	2qD	Mus musculus olfactory receptor 1128 (Olfr1128), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR176-3; MGC123547	MOR176-3; MGC123547
Mus musculus	RefSeq	ILMN_257010	ILMN_257010	RHPN1	NM_008164.1	NM_008164.1		14787	6680084	NM_008164.1	Rhpn1	NP_032190.1	ILMN_2890782	007510632	S	1850	GCTGGAGCCGCAAGAATAAACAAGGCAAGACTGGAAGCCACCCTGACCCC	15	+	75544573-75544622	15qD3	Mus musculus rhophilin, Rho GTPase binding protein 1 (Rhpn1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IPI]	Grbp; Rhophilin; KIAA1929; mKIAA1929; BB023497	Grbp; Rhophilin; KIAA1929; mKIAA1929; BB023497
Mus musculus	RefSeq	ILMN_184180	ILMN_257010	RHPN1	NM_008164.1	NM_008164.1		14787	6680084	NM_008164.1	Rhpn1	NP_032190.1	ILMN_2759266	002570546	S	1613	AGGGCGACTACATCGTGTCCGTGAACGGGCAGCCGTGCAAGTGGTGGAAG	15	+	75543896-75543945	15qD3	Mus musculus rhophilin, Rho GTPase binding protein 1 (Rhpn1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IPI]	Grbp; Rhophilin; KIAA1929; mKIAA1929; BB023497	Grbp; Rhophilin; KIAA1929; mKIAA1929; BB023497
Mus musculus	RefSeq	ILMN_184180	ILMN_257010	RHPN1	NM_008164.1	NM_008164.1		14787	6680084	NM_008164.1	Rhpn1	NP_032190.1	ILMN_2746985	006370278	S	511	GGCCTGGATCTGCTCGCAGCCTACTATAGCCAGCTCTGTTTCCTGGACGC	15	+	75540915-75540964	15qD3	Mus musculus rhophilin, Rho GTPase binding protein 1 (Rhpn1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IPI]	Grbp; Rhophilin; KIAA1929; mKIAA1929; BB023497	Grbp; Rhophilin; KIAA1929; mKIAA1929; BB023497
Mus musculus	RefSeq	ILMN_189450	ILMN_240233	GRHL2	NM_026496.3	NM_026496.3		252973	46849779	NM_026496.3	Grhl2	NP_080772.2	ILMN_1257070	005340731	S	4391	GAGTGAGCTGTCATCTTGAGGTTGGTTCCTAAAAGACTAAGGCACATCCC	15	+	37292979-37293028	15qB3.1	Mus musculus grainyhead-like 2 (Drosophila) (Grhl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	BOM; 0610015A08Rik; Tcfcp2l3	BOM; 0610015A08Rik; Tcfcp2l3
Mus musculus	RefSeq	ILMN_218180	ILMN_218180	IGHMBP2	NM_009212.1	NM_009212.1		20589	6678028	NM_009212.1	Ighmbp2	NP_033238.1	ILMN_2860419	003170180	S	4960	CCTATAGGGTTGCAAACCACTTCAGCTTCTTTGGTCCCCTCTCAAACTCC	19	-	3259524-3259573	19qA	Mus musculus immunoglobulin mu binding protein 2 (Ighmbp2), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AEP; Smbp2; nmd; RIPE3b1; Smubp2; sma; Smbp-2; Catf1	AEP; Smbp2; nmd; RIPE3b1; Smubp2; sma; Smbp-2; Catf1
Mus musculus	RefSeq	ILMN_201398	ILMN_201398	LOC385094	XM_358049.1	XM_358049.1			38093513	XM_358049.1	LOC385094		ILMN_1245488	001940253	S	268	GCGGTGGGCGGGGCAAACGCGGAAACCAAAACAGGAACCGCGAATGTGTA										
Mus musculus	Riken	ILMN_202662	ILMN_202662	ITK	ri|A430106A18|PX00064H19|AK020772|1201					AK020772	Itk		ILMN_1225078	004920451	S	931	GCCTCCCGAGTGTTGGAATTAAAATATGTGCCACCACTGCCCAGGTTGTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187246	ILMN_330044	LOC100048648	XM_001480794.1	XM_001480794.1		100048648	149274758	XM_001480794.1	LOC100048648	XP_001480844.1	ILMN_1229439	007210356	S	2043	AATACTATGTGTTTGAATGAAGTACAGAGTCAGATGAAGACAATACGGAG					PREDICTED: Mus musculus hypothetical protein LOC100048648 (LOC100048648), mRNA.					
Mus musculus	RefSeq	ILMN_200178	ILMN_228474	GM609	NM_001005854.1	NM_001005854.1		208166	54312053	NM_001005854.1	Gm609	NP_001005854.1	ILMN_1241801	006290347	S	1543	GGGGGGCTTGGTATAGATGAACCCCGAGTTCCATCCACATTGTTGCAAAT	16	-	45417397-45417446	16qB5	Mus musculus gene model 609, (NCBI) (Gm609), mRNA.				Gm1749	Gm1749
Mus musculus	RefSeq	ILMN_228474	ILMN_228474	GM609	NM_001005854.1	NM_001005854.1		208166	54312053	NM_001005854.1	Gm609	NP_001005854.1	ILMN_2820327	004480358	S	876	CATGCCCGAGCCATCATCAACACAGATGCCTAACCCACTATCAACACTGG	16	-	45418064-45418113	16qB5	Mus musculus gene model 609, (NCBI) (Gm609), mRNA.				Gm1749	Gm1749
Mus musculus	Riken	ILMN_207057	ILMN_207057	PHKG2	ri|A430010P18|PX00133J08|AK079680|1428					AK079680	Phkg2		ILMN_1257511	000070133	S	1057	GCCAAGACACCAGCAGGGTCCATCCCAGTCCCTCTTGGTTATAAATGAGG						An enzyme complex that catalyzes the phosphorylation of phosphorylase b to form phosphorylase a [goid 5964] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: 4 ATP + 2 phosphorylase b = 4 ADP + phosphorylase a [goid 4689] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222908	ILMN_258534	1500005I02RIK	NM_028055.3	NM_028055.3		72014	146141111	NM_028055.3	1500005I02Rik	NP_082331.1	ILMN_2756586	004780768	S	1839	CCTCTTGGATAGGAACTTCCACATTTGAGCCGAGGTGCTCTCTGAGCTGC				11qE2	Mus musculus RIKEN cDNA 1500005I02 gene (1500005I02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210125	ILMN_210125	SMGC	NM_198927.3	NM_198927.3		223809	146198649	NM_198927.3	Smgc	NP_945121.1	ILMN_2620853	003440086	S	2382	CCTTTTATCTTTTACTGGCATGTAAGGAGGCAGGGCTGTTGTCTGTTTCC				15qE3	Mus musculus submandibular gland protein C (Smgc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			DXImx49e; Sfc21; 2310010P21Rik	DXImx49e; Sfc21; 2310010P21Rik
Mus musculus	RefSeq	ILMN_210125	ILMN_210125	SMGC	NM_198927.3	NM_198927.3		223809	146198649	NM_198927.3	Smgc	NP_945121.1	ILMN_2602496	006480451	S	848	CAGTAGGCTGGATGGGCATTCATCAGATGGACTCTCCAAGGTGTCAGGAG				15qE3	Mus musculus submandibular gland protein C (Smgc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			DXImx49e; Sfc21; 2310010P21Rik	DXImx49e; Sfc21; 2310010P21Rik
Mus musculus	Riken	ILMN_204470	ILMN_204470	PFTK1	ri|B130030N14|PX00157H17|AK045083|2297					AK045083	Pftk1		ILMN_1228873	001190372	S	2054	CGGGAAGGAAAATCCCCTGCCTGTCACTAGAGCTGTGGCTCACTGGGTTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]		
Mus musculus	Riken	ILMN_203199	ILMN_203199	A930040K03RIK	ri|A930040K03|PX00067N19|AK044763|3181					AK044763	A930040K03Rik		ILMN_1256247	006270017	S	2975	GCCTCTTGCTGCCAAACAAGCCCAAGGCATGACAGGTTATTCAAGGGTGC										
Mus musculus	RefSeq	ILMN_222335	ILMN_222335	CYP11B2	NM_009991.2	NM_009991.2		13072	9845247	NM_009991.2	Cyp11b2	NP_034121.1	ILMN_2748181	007560736	S	898	CTCTCGACGCCATCAAAGCGAACTCTATGGAGCTCACCGCTGGGAGCGTT	15	-	74683475-74683524	15qD3	Mus musculus cytochrome P450, family 11, subfamily b, polypeptide 2 (Cyp11b2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The specific actions or reactions of an organism relating to the intake of liquids, especially water [goid 42756] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of ions within an organism or cell [goid 50801] [evidence IMP]; The process by which the hormone aldosterone decreases the rate of diuresis and natriuresis resulting in increased blood volume [goid 2017] [evidence IMP]; The process by which angiotensinogen metabolites in the bloodstream modulate the force with which blood passes through the circulatory system. The process begins when renin is released and cleaves angiotensinogen [goid 1991] [evidence IMP]; The chemical reactions and pathways resulting in the formation of aldosterone, a corticosteroid hormone that is produced by the zona glomerulosa of the adrenal cortex and regulates salt (sodium and potassium) and water balance [goid 32342] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: a steroid + reduced adrenal ferredoxin + O2 = an 11-beta-hydroxysteroid + oxidized adrenal ferredoxin + H2O [goid 4507] [evidence IDA]; Catalysis of the reaction: corticosterone + reduced adrenal ferredoxin + O2 = 18-hydroxycorticosterone + oxidized adrenal ferredoxin + H2O [goid 47783] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]	MGC151285; Cpn2; Cyp11b; Cyp11b-2	MGC151285; Cpn2; Cyp11b; Cyp11b-2
Mus musculus	RefSeq	ILMN_222335	ILMN_222335	CYP11B2	NM_009991.2	NM_009991.2		13072	9845247	NM_009991.2	Cyp11b2	NP_034121.1	ILMN_2860070	004760246	S	1392	ACTGAAAACCTTCCAGGTGGAGACACTGAGGCAAGAGGATGTGCAGATGG	15	-	74681530-74681579	15qD3	Mus musculus cytochrome P450, family 11, subfamily b, polypeptide 2 (Cyp11b2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The specific actions or reactions of an organism relating to the intake of liquids, especially water [goid 42756] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of ions within an organism or cell [goid 50801] [evidence IMP]; The process by which the hormone aldosterone decreases the rate of diuresis and natriuresis resulting in increased blood volume [goid 2017] [evidence IMP]; The process by which angiotensinogen metabolites in the bloodstream modulate the force with which blood passes through the circulatory system. The process begins when renin is released and cleaves angiotensinogen [goid 1991] [evidence IMP]; The chemical reactions and pathways resulting in the formation of aldosterone, a corticosteroid hormone that is produced by the zona glomerulosa of the adrenal cortex and regulates salt (sodium and potassium) and water balance [goid 32342] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: a steroid + reduced adrenal ferredoxin + O2 = an 11-beta-hydroxysteroid + oxidized adrenal ferredoxin + H2O [goid 4507] [evidence IDA]; Catalysis of the reaction: corticosterone + reduced adrenal ferredoxin + O2 = 18-hydroxycorticosterone + oxidized adrenal ferredoxin + H2O [goid 47783] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]	MGC151285; Cpn2; Cyp11b; Cyp11b-2	MGC151285; Cpn2; Cyp11b; Cyp11b-2
Mus musculus	RefSeq	ILMN_214973	ILMN_214973	DDX24	NM_020494.2	NM_020494.2		27225	34328252	NM_020494.2	Ddx24	NP_065240.2	ILMN_1249708	005360601	S	2721	CTGGCCTCCAGGAATATCGAGTCTGCGCTGAGCTGCCTGTCTAGGCAGAA	12	-	104646485-104646534	12qE	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 (Ddx24), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AI649272; 2510027P10Rik; 1700055J08Rik	AI649272; 2510027P10Rik; 1700055J08Rik
Mus musculus	RefSeq	ILMN_214973	ILMN_214973	DDX24	NM_020494.2	NM_020494.2		27225	34328252	NM_020494.2	Ddx24	NP_065240.2	ILMN_2747381	002230133	S	587	CGAAGGCGCTGCTGCCCAGAATGAGTATGAAGTCAAAGCGTCCGAGCCAG	12	-	104662426-104662475	12qE	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 (Ddx24), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AI649272; 2510027P10Rik; 1700055J08Rik	AI649272; 2510027P10Rik; 1700055J08Rik
Mus musculus	RefSeq	ILMN_214973	ILMN_214973	DDX24	NM_020494.2	NM_020494.2		27225	34328252	NM_020494.2	Ddx24	NP_065240.2	ILMN_2971567	003890041	S	2837	GCCCGGTCAATGTGGTGACTGTTGTCTGTAAAGGCTTCCCTCCTTGCCTT	12	-	104646369-104646418	12qE	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 (Ddx24), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AI649272; 2510027P10Rik; 1700055J08Rik	AI649272; 2510027P10Rik; 1700055J08Rik
Mus musculus	MEEBO	ILMN_222590	ILMN_222590	2700092H06RIK	scl078325.1_150	XM_132529.2			38081651	XM_132529.2	2700092H06Rik		ILMN_1229984	002710356	S	432	CCACTTTGCTGCCTCACAAGGTGTTTCCTACAAGTTGTTTAGATCCTAAA										
Mus musculus	RefSeq	ILMN_214904	ILMN_214904	TMED4	NM_134020.1	NM_134020.1		103694	19527235	NM_134020.1	Tmed4	NP_598781.1	ILMN_2698606	002970196	S	482	GCTCGCCAGTTGCTTGACCAGGTGGAACAGATCCAGAAGGAGCAGGATTA	11	-	6173750-6173799	11qA1	Mus musculus transmembrane emp24 protein transport domain containing 4 (Tmed4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1110014L17Rik; RP23-198N14.6; AI326346	1110014L17Rik; RP23-198N14.6; AI326346
Mus musculus	RefSeq	ILMN_214904	ILMN_214904	TMED4	NM_134020.1	NM_134020.1		103694	19527235	NM_134020.1	Tmed4	NP_598781.1	ILMN_2695526	003420762	S	293	AGGGCCGTTTCACGTTCACATCCCACACACCCGGTGACCATCAGATTTGT	11	-	6174159-6174208	11qA1	Mus musculus transmembrane emp24 protein transport domain containing 4 (Tmed4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1110014L17Rik; RP23-198N14.6; AI326346	1110014L17Rik; RP23-198N14.6; AI326346
Mus musculus	RefSeq	ILMN_214904	ILMN_214904	TMED4	NM_134020.1	NM_134020.1		103694	19527235	NM_134020.1	Tmed4	NP_598781.1	ILMN_2906414	000580215	S	1478	GCCTCAGATCCTCCGTGAGTATGCCTACCAAATGTTGTGATTAAAGAGGC	11	-	6170814-6170863	11qA1	Mus musculus transmembrane emp24 protein transport domain containing 4 (Tmed4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1110014L17Rik; RP23-198N14.6; AI326346	1110014L17Rik; RP23-198N14.6; AI326346
Mus musculus	RefSeq	ILMN_214904	ILMN_214904	TMED4	NM_134020.1	NM_134020.1		103694	19527235	NM_134020.1	Tmed4	NP_598781.1	ILMN_2695528	006200360	S	311	CATCCCACACACCCGGTGACCATCAGATTTGTCTTCACTCCAACTCCACC	11	-	6174141-6174190	11qA1	Mus musculus transmembrane emp24 protein transport domain containing 4 (Tmed4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1110014L17Rik; RP23-198N14.6; AI326346	1110014L17Rik; RP23-198N14.6; AI326346
Mus musculus	Riken	ILMN_202551	ILMN_202551	5730575G16RIK	ri|5730575G16|PX00006L02|AK017866|688					AK017866	5730575G16Rik		ILMN_1254510	000580750	S	466	CATGCCCCAGGTCGAGTACAGCATGTGGGTGACGCGAAGAAAATGCCTGA										
Mus musculus	Riken	ILMN_205243	ILMN_205243	XPR1	ri|E230022G24|PX00210C13|AK054130|1063					AK054130	Xpr1		ILMN_1221754	006960706	S	926	ACCAGGTGTAGTAGCACAAACCTGTAATCCCAGCATTTAGGAAGGAGAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212693	ILMN_212693	ADCK5	NM_172960.1	NM_172960.1		268822	27370471	NM_172960.1	Adck5	NP_766548.1	ILMN_2918317	004260397	S	1759	CTGGAAATCCTAGCCATGCGGCTCACCGCCCTCATGCTGCGTGTTCTGGT	15	+	76422796-76422845	15qD3	Mus musculus aarF domain containing kinase 5 (Adck5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MGC69569; A230108P17	MGC69569; A230108P17
Mus musculus	MEEBO	ILMN_187328	ILMN_187328	SCL0002069.1_48	scl0002069.1_48	AF317223.1			11596386	AF317223.1	scl0002069.1_48		ILMN_2443164	001740270	S	15	TCGCTCTGGATTCCATTTGGGTCAGCCTGGCTGGTTCCTACAGCCTTAGG										
Mus musculus	RefSeq	ILMN_213388	ILMN_213388	RPE65	NM_029987.2	NM_029987.2		19892	147902088	NM_029987.2	Rpe65	NP_084263.2	ILMN_1259961	003850402	S	1558	CCTGGTTCTGAATGCCAAAGACTTGAGTGAAATTGCCAGGGCTGAAGTGG				3qH4	Mus musculus retinal pigment epithelium 65 (Rpe65), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Any process that modulates the frequency, rate or extent of rhodopsin gene expression. This includes transcriptional, translational, or posttranslational regulation [goid 7468] [evidence IMP]; The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A [goid 42574] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]		rd12; LCA2; RP20; 65kDa; A930029L06Rik; Mord1	rd12; LCA2; RP20; 65kDa; A930029L06Rik; Mord1
Mus musculus	RefSeq	ILMN_209382	ILMN_209382	TCN2	NM_015749.2	NM_015749.2		21452	118131003	NM_015749.2	Tcn2	NP_056564.1	ILMN_1221787	005310133	S	1364	GCTGACTACAAACCCCAGGACGGGGAAACCATTGAGCTGCGGCTAGTTAG	11	-	3817657-3817706	11qA1	Mus musculus transcobalamin 2 (Tcn2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [evidence IEA]; The directed movement of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom, into, out of or within a cell [goid 15889] [evidence IEA]	Catalysis of the transfer of cobalt (Co) ions from one side of a membrane to the other [goid 15087] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Interacting selectively with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 31419] [evidence IEA]	Tcn-2; AW208754	Tcn-2; AW208754
Mus musculus	RefSeq	ILMN_216117	ILMN_216117	BC003266	NM_030252.2	NM_030252.2		80284	114145577	NM_030252.2	BC003266	NP_084528.1	ILMN_1247245	004070114	S	796	CAGGAATGTCCCTGGCTCCCTTGATGAGGCTTTCTTATTTTCCTGTGTGC	4	+	126924827-126924876	4qD2.2	Mus musculus cDNA sequence BC003266 (BC003266), mRNA.				MGC7764	MGC7764
Mus musculus	Riken	ILMN_201976	ILMN_201976	KIF23	ri|3110001D19|ZX00035I24|AK013939|1947					AK013939	KIF23		ILMN_1249092	007550338	S	1671	CTGCCTCGGGGAGGCCCCGTTGGAGATGGTATGATTTGGTGTTGTATCAT										
Mus musculus	RefSeq	ILMN_227395	ILMN_227395	EPRS	NM_029735.1	NM_029735.1		107508	82617574	NM_029735.1	Eprs	NP_084011.1	ILMN_3148398	001300202	A	143	CCGCTGGAAGCTCTGCTGGCGGTGGAACATGTGAAAGGTGATGTCAGCAT	1	+	187187116-187187122:187191410-187191452	1qH5	Mus musculus glutamyl-prolyl-tRNA synthetase (Eprs), mRNA. XM_899642 XM_899647 XM_899651 XM_899655 XM_899659 XM_899665 XM_916645	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling glutamate to glutamyl-tRNA, catalyzed by glutamyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'- adenosine residue of the tRNA [goid 6424] [evidence IEA]; The process of coupling proline to prolyl-tRNA, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6433] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu) [goid 4818] [evidence IEA]; Catalysis of the reaction: ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro) [goid 4827] [evidence IEA]	Qprs; 2410081F06Rik; 3010002K18Rik; C79379	Qprs; 2410081F06Rik; 3010002K18Rik; C79379
Mus musculus	RefSeq	ILMN_227395	ILMN_227395	EPRS	NM_029735.1	NM_029735.1		107508	82617574	NM_029735.1	Eprs	NP_084011.1	ILMN_3069857	001990347	I	1918	CAAGATCACTTGGCTTGCTGAGAGCACACACGCTCTCTCGATCCCAGCCG	1	+	187221011-187221060	1qH5	Mus musculus glutamyl-prolyl-tRNA synthetase (Eprs), mRNA. XM_899642 XM_899647 XM_899651 XM_899655 XM_899659 XM_899665 XM_916645	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling glutamate to glutamyl-tRNA, catalyzed by glutamyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'- adenosine residue of the tRNA [goid 6424] [evidence IEA]; The process of coupling proline to prolyl-tRNA, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6433] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu) [goid 4818] [evidence IEA]; Catalysis of the reaction: ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro) [goid 4827] [evidence IEA]	Qprs; 2410081F06Rik; 3010002K18Rik; C79379	Qprs; 2410081F06Rik; 3010002K18Rik; C79379
Mus musculus	MEEBO	ILMN_213892	ILMN_213892	5330408N05RIK	scl0320720.1_0	NM_177244.2			31343157	NM_177244.2	5330408N05Rik		ILMN_2641915	003990500	S	3110	TGTAAGCATTTGTGCCAATACCTGCTCCTGCTAAATGGTACCTCTCCATC										
Mus musculus	RefSeq	ILMN_209716	ILMN_209716	MAOA	NM_173740.2	NM_173740.2		17161	84579838	NM_173740.2	Maoa	NP_776101.2	ILMN_2737954	000380543	S	1941	TTGTGTTGGTTGATAGAATAAAATGTTGAGTGCTTAATTTCAAAAAGTTA	X	+	16262718-16262767	XqA1.2	Mus musculus monoamine oxidase A (Maoa), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]; The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42420] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]	MGC27811; 1110061B18Rik; AA407771	MGC27811; 1110061B18Rik; AA407771
Mus musculus	RefSeq	ILMN_221407	ILMN_221407	MYADM	NM_016969.1	NM_016969.1		50918	8393799	NM_016969.1	Myadm	NP_058665.1	ILMN_2851671	006940451	S	2439	GGGTGCTGAGAGTACAGATATACCACCATACCCTCGTTGTGTAGCCCCGT	7	+	3298975-3299024	7qA1	Mus musculus myeloid-associated differentiation marker (Myadm), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			D7Wsu62e	D7Wsu62e
Mus musculus	Riken	ILMN_204259	ILMN_204259	A830087C18RIK	ri|A830087C18|PX00156M14|AK044072|1949					AK044072	A830087C18Rik		ILMN_1258264	004640730	S	1558	TGTGGAGCGGGGCTTTGGCAGGGTGGCCGTTCCCAGTTGGTTTTTTAGTG										
Mus musculus	RefSeq	ILMN_219231	ILMN_248351	PUS1	NM_001025561.2	NM_001025561.2		56361	91982763	NM_001025561.2	Pus1	NP_001020732.1	ILMN_2705969	004490608	S	1471	GCGGTCCATGGCCCAGTGGCTCAATACTTTGCCGATCCACAACTTCAGTG	5	-	111203575-111203624	5qF	Mus musculus pseudouridine synthase 1 (Pus1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The intramolecular conversion of uridine to pseudouridine in a tRNA molecule [goid 31119] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA];  [goid 30374] [evidence IDA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IDA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IMP]	mPus1p; MPUS1; A730013B20Rik	mPus1p; MPUS1; A730013B20Rik
Mus musculus	RefSeq	ILMN_248351	ILMN_248351	PUS1	NM_001025561.2	NM_001025561.2		56361	91982763	NM_001025561.2	Pus1	NP_001020732.1	ILMN_3116991	003710020	A	1570	GGAGGGCAGTGAAGGGGATGGAGACACTGACTGAAACTGTAGATCCTGCC	5	-	111202934-111202950:111202951-111202983	5qF	Mus musculus pseudouridine synthase 1 (Pus1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The intramolecular conversion of uridine to pseudouridine in a tRNA molecule [goid 31119] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA];  [goid 30374] [evidence IDA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IDA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IMP]	mPus1p; MPUS1; A730013B20Rik	mPus1p; MPUS1; A730013B20Rik
Mus musculus	MEEBO	ILMN_211120	ILMN_211120	BC052360	scl30016.16_629	XM_132552.3			38084202	XM_132552.3	BC052360		ILMN_1225856	000130181	S	3882	CTGCCTTGCTGGGCAGTCTGACTTTGGTACGTTCATTCCACCTGAATTAG										
Mus musculus	RefSeq	ILMN_198754	ILMN_198754	LOC278087	XM_205193.1	XM_205193.1		278087	25030552	XM_205193.1	LOC278087	XP_205193.1	ILMN_2896534	000130674	S	984	TGCTGCCAGGATTCCCTCACATGCCCAAGCTAGCAGTTCCTCCCACATTT	X	-	88184666-88184715	XqC2	PREDICTED: Mus musculus similar to melanoma antigen, family B, 2 (LOC278087), mRNA.					
Mus musculus	RefSeq	ILMN_219151	ILMN_251272	CEP164	XM_991783.1	XM_991783.1		214552	94387114	XM_991783.1	Cep164	XP_996877.1	ILMN_1233430	001190300	S	2166	GTGGGAGAGGGTCAGAGATGAACAGAGACTAGAGGAGGGCTGCAGTGGAG				9qA5.2	PREDICTED: Mus musculus centrosomal protein 164, transcript variant 1 (Cep164), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_254481	ILMN_254481	CAR5B	NM_019513.1	NM_019513.1		56078	9506462	NM_019513.1	Car5b	NP_062386.1	ILMN_3132559	004730672	A	891	GAAGCAGCCAGTTGAGGTTGACCGTGACCAGCTTGAGCAGTTTCGGACCC	X	-	160417249-160417298	XqF5	Mus musculus carbonic anhydrase 5b, mitochondrial (Car5b), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IDA]	CAVB; 7330410H16Rik; D730005F19Rik; CarVb	CAVB; 7330410H16Rik; D730005F19Rik; CarVb
Mus musculus	RefSeq	ILMN_222372	ILMN_222372	A930005I04RIK	NM_207277.1	NM_207277.1		403174	46402310	NM_207277.1	A930005I04Rik	NP_997160.1	ILMN_1230498	003850440	S	2691	GGGACTCCAAGACGACAGGTAGTGAGAAGGTCCCAGAAGCCACTCTCCAG	5	+	35266386-35266435	5qB2	Mus musculus RIKEN cDNA A930005I04 gene (A930005I04Rik), mRNA.				Gm144	Gm144
Mus musculus	Riken	ILMN_204549	ILMN_204549	B930007E16RIK	ri|B930007E16|PX00162F01|AK046947|2419					AK046947	B930007E16Rik		ILMN_1238508	005820066	S	2082	GGAGATCAGGCTATGCCCAACAACCAGGAAATGAAACGTTCTGAGTAAGG										
Mus musculus	RefSeq	ILMN_223356	ILMN_223356	TBX21	NM_019507.1	NM_019507.1		57765	9507178	NM_019507.1	Tbx21	NP_062380.1	ILMN_2762983	006380209	S	2178	TTTACAACAGCCAGCCAAACAGAGAAGACTCAGGTGACTGCGGGCGGACT	11	-	96959594-96959643	11qD	Mus musculus T-box 21 (Tbx21), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Tblym; T-bet; TBT1	Tblym; T-bet; TBT1
Mus musculus	Riken	ILMN_206156	ILMN_206156	SEPT6	ri|C920001C06|PX00178G14|AK083302|3392					AK083302	Sept6		ILMN_1241862	004150398	S	2779	GACTTGGCAGAGAGTCCACAGTGAAGTTGCTGATCTTTGCTCCCCGGGAA						Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211993	ILMN_211993	TRPA1	NM_177781.4	NM_177781.4		277328	146198698	NM_177781.4	Trpa1	NP_808449.1	ILMN_2621548	005820358	S	3895	AGACTGTGATAAGTATGAATGTTACAATAGAAATGTGTTCCCTTAGTGTT				1qA3	Mus musculus transient receptor potential cation channel, subfamily A, member 1 (Trpa1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An actin-based, cross-linked cellular protrusion on the apical surface of auditory and vestibular hair cells. Stereocilium bundles act as mechanosensory organelles by responding to fluid motion or fluid pressure changes [goid 32421] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IMP]; The series of events required for an organism to receive a temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. Thermoception in larger animals is mainly done in the skin; mammals have at least two types of sensor, for detecting heat (temperatures above body temperature) and cold (temperatures below body temperature) [goid 50955] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The series of events involved in the perception of pain in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50968] [evidence IMP]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]; The series of events involved in the perception of pain in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50968] [evidence IMP]; The series of events involved in the perception of pain in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50968] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; The series of events involved in the perception of pain in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50968] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence IDA]	Anktm1	Anktm1
Mus musculus	MEEBO	ILMN_210225	ILMN_210225	IGFBP4	scl016010.7_252	NM_010517.2			31542993	NM_010517.2	Igfbp4		ILMN_2694955	005080435	S	1627	GGGACAGGGCCCATCTTTGGTCAGGGTATTCGGTCATCCGACAATGCCTT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]		
Mus musculus	RefSeq	ILMN_188978	ILMN_234300	TRNT1	NM_027296.2	NM_027296.2		70047	118130356	NM_027296.2	Trnt1	NP_081572.1	ILMN_1253587	003130397	S	1468	GGCCGGCCTATCAGATTCAGGTTGGACGCTTTATACACAGTCAGTGTCTC	6	+	106731724-106731773	6qE1	Mus musculus tRNA nucleotidyl transferase, CCA-adding, 1 (Trnt1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence ISO]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + tRNA(n) = diphosphate + tRNA(n+1) [goid 4810] [evidence IEA]; Catalysis of the reaction: tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate [goid 9022] [evidence ISO]	CGI-47; AA408384; mt-Trat; C76540; 2610044E04Rik; 2410043H24Rik; 9830143O18Rik	CGI-47; AA408384; mt-Trat; C76540; 2610044E04Rik; 2410043H24Rik; 9830143O18Rik
Mus musculus	RefSeq	ILMN_198961	ILMN_254458	EG664859	XM_973092.1	XM_973092.1		664859	94383567	XM_973092.1	EG664859	XP_978186.1	ILMN_1225439	001580301	S	1380	AAGCCCAGGATCAAGCATCCCAGGAAGTCCGCGGACATGGGAGAGACGTT	8	+	57997884-57997933	8qB2	PREDICTED: Mus musculus predicted gene, EG664859 (EG664859), mRNA.					
Mus musculus	RefSeq	ILMN_227411	ILMN_227411	EG546038	NM_001039563.1	NM_001039563.1		546038	88501724	NM_001039563.1	EG546038	NP_001034652.1	ILMN_3089574	001070523	A	73	CCAATGCCTCGTCCATTAACCACTTAGTCACTGAACCTCCCAGTTTCCCC	8	+	19141380-19141429	8qA1.3	Mus musculus predicted gene, EG546038 (EG546038), transcript variant c, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Spag11c/h; Ep2c/h	Spag11c/h; Ep2c/h
Mus musculus	RefSeq	ILMN_186247	ILMN_186247	TOMM70A	NM_138599.4	NM_138599.4		28185	146149314	NM_138599.4	Tomm70a	NP_613065.2	ILMN_1234112	001450112	S	3546	TATTTGCATGGCTGTATTTACATTAATAGGGACATCTTCTACTCTTCTCC				16qC1.1	Mus musculus translocase of outer mitochondrial membrane 70 homolog A (yeast) (Tomm70a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D16Ium22; Tom70; D16Wsu109e; D16Ium22e; mKIAA0719; 2610044B22Rik	D16Ium22; Tom70; D16Wsu109e; D16Ium22e; mKIAA0719; 2610044B22Rik
Mus musculus	RefSeq	ILMN_243178	ILMN_243178	LOC622408	NM_001037914.1	NM_001037914.1		622408	85702305	NM_001037914.1	LOC622408	NP_001033003.1	ILMN_2995948	004230243	S	2120	GGTTTGCGTGCTTGCTGCTTTTGGAGAGGGCTTGGACTTCAGAACCCAGC	13	+	114121038-114121087	13qD2.2	Mus musculus similar to geminin (LOC622408), mRNA.					
Mus musculus	RefSeq	ILMN_213188	ILMN_213188	MMAA	NM_133823.3	NM_133823.3		109136	142383676	NM_133823.3	Mmaa	NP_598584.2	ILMN_1256976	000630717	S	2753	GGAAATATTGTTTGCTGTTTTATGCTAAAGTTGTGGATCCCTAAAGCTAC	8	-	81790344-81790393	8qC2	Mus musculus methylmalonic aciduria (cobalamin deficiency) type A (Mmaa), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	AI840684; 2810018E08Rik; MGC37960	AI840684; 2810018E08Rik; MGC37960
Mus musculus	RefSeq	ILMN_186561	ILMN_229736	AKR1C13	NM_013778.1	NM_013778.1		27384	7304878	NM_013778.1	Akr1c13	NP_038806.1	ILMN_2606079	006580458	S	1117	AAGCTTTAATTAATGATCTCAAAGAAATGGAATATAATTTTCATGATGCT	13	+	4204768-4204817	13qA1	Mus musculus aldo-keto reductase family 1, member C13 (Akr1c13), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the NADPH-dependent reduction of carbonyl compounds [goid 4033] [evidence ISS]	mKIAA4014; KIAA4014	mKIAA4014; KIAA4014
Mus musculus	RefSeq	ILMN_223280	ILMN_223280	FSD1	NM_183178.2	NM_183178.2		240121	118130725	NM_183178.2	Fsd1	NP_899001.1	ILMN_1254128	003990152	S	1619	GGCCAGGCCATCTACCAGCTGGGGTGCTTCAGCCCAGCTTCTTCTTTCTG	17	+	56136175-56136175:56136176-56136224	17qD	Mus musculus fibronectin type 3 and SPRY domain-containing protein (Fsd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		MGC58341	MGC58341
Mus musculus	Riken	ILMN_201820	ILMN_201820	2610200O14RIK	ri|2610200O14|ZX00061G22|AK011854|523					AK011854	2610200O14Rik		ILMN_1222365	001780162	S	301	GCATCCGTGGCCTCTGCTTGGCTGAGATGAAGACGTTCCGAGATGTTCCC										
Mus musculus	RefSeq	ILMN_198381	ILMN_198381	LOC240498	XM_140546.3	XM_140546.3			38084770	XM_140546.3	LOC240498		ILMN_1236699	002360241	S	1353	GGGGGTAGTTAAAGATTCAGTGGGCAAGTTAACCACCTTCACATCTGCCC										
Mus musculus	RefSeq	ILMN_209701	ILMN_219560	PPAP2A	NM_008247.2	NM_008247.2		19012	142369083	NM_008247.2	Ppap2a	NP_032273.1	ILMN_2759079	004490309	S	1231	ACCGCCAGTTCACGGAACTACTCAACCAATCACGAGCCCTGAAGGGTACA	13	+	113657735-113657776:113657777-113657784	13qD2.2	Mus musculus phosphatidic acid phosphatase 2a (Ppap2a), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The chemical reactions and pathways resulting in the formation of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 6651] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence TAS]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [evidence TAS]; The chemical reactions and pathways involving sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues [goid 6670] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence TAS]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	LPP-1; Hic53; LPP1; Hpic53; mPAP	LPP-1; Hic53; LPP1; Hpic53; mPAP
Mus musculus	RefSeq	ILMN_219560	ILMN_219560	PPAP2A	NM_008247.2	NM_008247.2		19012	142369083	NM_008247.2	Ppap2a	NP_032273.1	ILMN_1258830	002480706	S	536	TCTGTACTGACAACAGCGTGAAGTACCCGTACCATGACAGTACCATCCCG	13	+	113625127-113625176	13qD2.2	Mus musculus phosphatidic acid phosphatase 2a (Ppap2a), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The chemical reactions and pathways resulting in the formation of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 6651] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence TAS]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [evidence TAS]; The chemical reactions and pathways involving sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues [goid 6670] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence TAS]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	LPP-1; Hic53; LPP1; Hpic53; mPAP	LPP-1; Hic53; LPP1; Hpic53; mPAP
Mus musculus	RefSeq	ILMN_214730	ILMN_255931	4921539E11RIK	XM_915378.2	XM_915378.2		70941	94372031	XM_915378.2	4921539E11Rik	XP_920471.1	ILMN_2651280	005900220	S	2298	CAACCTTGCCCTATGGTTGACTATCAGCACAGATACACCAATAGTTTACT				4qC6	PREDICTED: Mus musculus RIKEN cDNA 4921539E11 gene, transcript variant 3 (4921539E11Rik), mRNA.					
Mus musculus	Riken	ILMN_203390	ILMN_203390	ARP2	ri|6820402C04|PX00023B16|AK033014|2090					AK033014	ARP2		ILMN_1255907	000630196	S	1790	CTGAGGCAAGAGTGCCATATAAGTAGTGAGACCAACCTCATGAGGCCTCC										
Mus musculus	RefSeq	ILMN_220427	ILMN_314792	LOC638034	XR_034751.1	XR_034751.1		638034	149262219	XR_034751.1	LOC638034		ILMN_1229359	005910181	S	2800	GCTACTAGTGCAATAAGGTGAAGGCTGTCTGCCCAGAGAAATACATAATT					PREDICTED: Mus musculus similar to signal recognition particle receptor ('docking protein') (LOC638034), misc RNA.					
Mus musculus	RefSeq	ILMN_254737	ILMN_254737	GSK3A	NM_001031667.1	NM_001031667.1		606496	72384360	NM_001031667.1	Gsk3a	NP_001026837.1	ILMN_3160897	001710630	S	1563	ACTTCCTACAACCCATCCTCACAAGCTTTAACTGAAGCTCAGACTGGCCA	7	-	26013924-26013949:26014484-26014507	7qA3	Mus musculus glycogen synthase kinase 3 alpha (Gsk3a), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + tau-protein = ADP + O-phospho-tau-protein [goid 50321] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]		
Mus musculus	RefSeq	ILMN_201008	ILMN_310376	LOC100041934	XM_001476463.1	XM_001476463.1		100041934	149273174	XM_001476463.1	LOC100041934	XP_001476513.1	ILMN_1252709	002760551	S	1145	CCTCCACATCATTCCAGAGACCCCTCTGGCTGAGGCGAGATCAGGTGATA	Y|NT_166348.1	+	111450-111499		PREDICTED: Mus musculus hypothetical protein LOC100041934, transcript variant 1 (LOC100041934), mRNA.					
Mus musculus	MEEBO	ILMN_188165	ILMN_188165	SCL00238693.1_37	scl00238693.1_37	BC027395.1			22268038	BC027395.1	scl00238693.1_37		ILMN_2450328	003800390	S	19	GAATGCGTGCTTTCCTGGATCATAGTGCCTTATGGGCCTATCTGGGGGCT										
Mus musculus	Riken	ILMN_205663	ILMN_205663	B930044L09RIK	ri|B930044L09|PX00164B03|AK047275|2297					AK047275	B930044L09Rik		ILMN_1222959	001580113	S	1888	CTGAATAGCAAGCCCTGGAATCGGTCCTATCTTTGCATCCCCACTGCTGT										
Mus musculus	RefSeq	ILMN_196580	ILMN_196580	GSTM2	NM_008183.3	NM_008183.3		14863	141802539	NM_008183.3	Gstm2	NP_032209.1	ILMN_2624854	007510072	S	980	GTGTGCTGCCTTGGTCCTCAGAGTAAGCAGCTAAGCCCCATTTGGTTCTC	3	-	107784637-107784686	3qF2.3	Mus musculus glutathione S-transferase, mu 2 (Gstm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gstb2; Gstb-2	Gstb2; Gstb-2
Mus musculus	RefSeq	ILMN_222820	ILMN_222820	KLRA2	NM_008462.3	NM_008462.3		16633	40538839	NM_008462.3	Klra2	NP_032488.3	ILMN_2814974	001190102	S	1522	GTGTTTGTCTTTCTGTCTCTGTTTCCCTGATCAATATAATGCATTTGGTG	6	-	131185143-131185192	6qF3	Mus musculus killer cell lectin-like receptor, subfamily A, member 2 (Klra2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Klra30; Ly49b	Klra30; Ly49b
Mus musculus	RefSeq	ILMN_199313	ILMN_199313	LOC212970	XM_135650.2	XM_135650.2			38094297	XM_135650.2	LOC212970		ILMN_2534803	003520324	S	1444	GGCTCCAAAAGAGCCCCTCCTGGGCTTTGTCCCAGATGTAAGAAAGGCTA										
Mus musculus	RefSeq	ILMN_201068	ILMN_201068	LOC382140	XM_356236.1	XM_356236.1			38088522	XM_356236.1	LOC382140		ILMN_1258409	002350180	S	449	GGAAACACCCGATAAGGAGTAAGGAAAAGGAGCGAGAGAGTGTGTGCCAG										
Mus musculus	MEEBO	ILMN_189464	ILMN_189464	2610203C22RIK	scl072481.2_13						2610203C22Rik		ILMN_2461487	007150327	S	10	TTCCCACTCATCACTGACTCTCTTGGGTGAGAGGAAGCGCCACACTCATC										
Mus musculus	RefSeq	ILMN_200555	ILMN_252228	LOC546711	XM_908296.3	XM_908296.3		546711	149269958	XM_908296.3	LOC546711	XP_913389.3	ILMN_2539172	006650475	S	80	GCGCCAAGGCTAAGAAGTGGTCCAAAAGCAAAGTTCGGGACAAGTTGGAC					PREDICTED: Mus musculus similar to hCG1640785 (LOC546711), mRNA.					
Mus musculus	RefSeq	ILMN_200916	ILMN_250093	G630014P10RIK	XM_975371.1	XM_975371.1		333639	94407785	XM_975371.1	G630014P10Rik	XP_980465.1	ILMN_1240964	002100551	S	1166	CCACCATGCAGCCCACAGAACTTCACAGCATCCTGCATGTCATCCAGTAG				XqA7.2	PREDICTED: Mus musculus RIKEN cDNA G630014P10 gene (G630014P10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214822	ILMN_214822	CTSG	NM_007800.1	NM_007800.1		13035	6681082	NM_007800.1	Ctsg	NP_031826.1	ILMN_1220236	007650682	S	770	CCCAGGGCATCGTCTCCTATGGAAGCAACAATGGTAACCCTCCAGCTGTA	14	-	56718900-56718949	14qC3	Mus musculus cathepsin G (Ctsg), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_233938	ILMN_233938	RTKN	NM_009106.1	NM_009106.1		20166	6677826	NM_009106.1	Rtkn	NP_033132.1	ILMN_3143266	004250411	A	2417	CATGGTACAGAGGGGGACCATTCCTGGAGCTGGCTAGGATTCCCCTAAGC	6	+	83102393-83102442	6qC3	Mus musculus rhotekin (Rtkn), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with the GTP-bound form of the Rho protein [goid 17049] [evidence IDA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IDA]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222734	ILMN_233938	RTKN	NM_009106.1	NM_009106.1		20166	6677826	NM_009106.1	Rtkn	NP_033132.1	ILMN_2768692	003170543	S	2262	GGATCTGGCCAAGAAAGAAAATGACCCAAGGACAACTGGGCTCTAGGTCC	6	+	83102238-83102287	6qC3	Mus musculus rhotekin (Rtkn), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with the GTP-bound form of the Rho protein [goid 17049] [evidence IDA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IDA]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [evidence IDA]		
Mus musculus	RefSeq	ILMN_186874	ILMN_324315	LOC100045501	XM_001474411.1	XM_001474411.1		100045501	149258461	XM_001474411.1	LOC100045501	XP_001474461.1	ILMN_1251302	002320674	S	1416	CCTTCCAAGAGTAACCAGAGACTTTATCCAGCCTAGAATCCTTCTCCTGG					PREDICTED: Mus musculus hypothetical protein LOC100045501 (LOC100045501), mRNA.					
Mus musculus	MEEBO	ILMN_223231	ILMN_223231	IBTK	scl35535.28_151	XM_135030.4			38089969	XM_135030.4	Ibtk		ILMN_2761188	000450039	S	1660	TGGGAAAGAATCCATGGCGATAGGTTGGCAGCTTGACTTGAGCTGATGGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence ISO]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]; Stops, prevents or reduces the activity of a protein tyrosine kinase [goid 30292] [evidence ISO]		
Mus musculus	RefSeq	ILMN_220934	ILMN_220934	TMEM101	NM_029649.1	NM_029649.1		76547	21313231	NM_029649.1	Tmem101	NP_083925.1	ILMN_1245872	006860113	S	1242	GTATAGAAGTAGCCCTGTAAGGAGGGGCAGAGTGGCTGGTGCTACAGACG	11	-	102014099-102014148	11qD	Mus musculus transmembrane protein 101 (Tmem101), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610511E22Rik	2610511E22Rik
Mus musculus	RefSeq	ILMN_218625	ILMN_229252	BEAN	XM_913080.3	XM_913080.3		65115	149259252	XM_913080.3	Bean	XP_918173.2	ILMN_2698221	001740274	S	1833	TGTCATCCAGGGTGGTAACTCCCAGCTGGGGACTGGGCTGATGAAGTCTG				8qD3	PREDICTED: Mus musculus brain expressed, associated with Nedd4, transcript variant 3 (Bean), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216353	ILMN_216353	SLC16A1	NM_009196.3	NM_009196.3		20501	141802927	NM_009196.3	Slc16a1	NP_033222.1	ILMN_2670091	006480730	S	4065	CAAGTCCTTTCAGTTCACATAGCCGTGGCTGCTGGGTAATAGATGTGAGC	3	+	104462024-104462073	3qF2.2	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 1 (Slc16a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism [goid 15355] [evidence IEA]	Mct1; AL022710	Mct1; AL022710
Mus musculus	RefSeq	ILMN_200907	ILMN_200907	LOC384648	XM_357764.1	XM_357764.1			38086957	XM_357764.1	LOC384648		ILMN_1243343	004490711	S	1296	TCGTGCCCTGGATCGCCAGGATCCCGAGTTCTATGACCCCCCTCAAAAAG										
Mus musculus	Riken	ILMN_202561	ILMN_202561	2510042H12RIK	ri|2510042H12|ZX00048I17|AK011092|1052					AK011092	2510042H12Rik		ILMN_1241039	001110079	S	754	CCGTAATAATTTAAGGTCCTGGGGCACTGTCTGCTGGTGACCTTGGCGAG										
Mus musculus	Riken	ILMN_203165	ILMN_203165	9930104H07RIK	ri|9930104H07|PX00062D01|AK037051|2456					AK037051	9930104H07Rik		ILMN_1224602	003780327	S	2158	ATCCTACTATGAAGCCAAGGATGGCCTGCGCTCCTCACTCAAGCTGCACC										
Mus musculus	MEEBO	ILMN_212017	ILMN_212017	1810015A11RIK	scl49382.3.1_6	XM_358772.1			38080435	XM_358772.1	1810015A11Rik		ILMN_2621791	006330291	S	520	GGGAGAATCAGTGAGGAACAGACTGAAACAAAGAAGAGCAGCATTACAAG										
Mus musculus	RefSeq	ILMN_222581	ILMN_222581	KRT2	NM_010668.2	NM_010668.2		16681	124487418	NM_010668.2	Krt2	NP_034798.2	ILMN_2751818	000010050	S	2466	GGACCCCAGGGTAGCCTCCCTATTCTACCCCCAACAGTGGTCTAAGGAAC	15	-	101641217-101641266	15qF2	Mus musculus keratin 2 (Krt2), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt2-17; Krt2-2; Krt2e; BB005427	Krt2-17; Krt2-2; Krt2e; BB005427
Mus musculus	RefSeq	ILMN_196932	ILMN_231023	EG620899	XM_885282.2	XM_885282.2		620899	94363725	XM_885282.2	EG620899	XP_890375.1	ILMN_2526302	006550368	S	1344	TAAGCTCCACAGTCTGCTCTCGGGAAAGCCTGTCCAATCTGGAGGGCGTT	1	-	80380388-80380437	1qC4	PREDICTED: Mus musculus predicted gene, EG620899 (EG620899), mRNA.					
Mus musculus	RefSeq	ILMN_184300	ILMN_226883	AHCTF1	NM_026375.1	NM_026375.1		226747	26006852	NM_026375.1	Ahctf1	NP_080651.1	ILMN_2717696	002690689	S	7193	CACATGGAGTGCAGTTCTTGTAGTGCAGGCGTTTTATACGACTTGATGCG	1	-	181676273-181676322	1qH4	Mus musculus AT hook containing transcription factor 1 (Ahctf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]	6230412P20Rik; Elys; AV011447	6230412P20Rik; Elys; AV011447
Mus musculus	Riken	ILMN_203957	ILMN_203957	INVS	ri|A430085I22|PX00138J03|AK040307|1866					AK040307	Invs		ILMN_1257729	003060706	S	1767	GCTGACATTAAGCTCTGCCGCTCACTGTGCACTCACCAGGGACGTCTGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201394	ILMN_231576	LOC673501	XM_001005723.1	XM_001005723.1		673501	94411300	XM_001005723.1	LOC673501	XP_001005723.1	ILMN_1247996	005090064	S	227	TGAGCAATAACAGGTTTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGC					PREDICTED: Mus musculus hypothetical protein LOC673501 (LOC673501), mRNA.					
Mus musculus	MEEBO	ILMN_223772	ILMN_223772	MAGEA7	scl0017143.1_63	NM_020281.1			9937977	NM_020281.1	Magea7		ILMN_1244151	004210497	S	70	ATGACCAGGCTACCATGGACACATCAGAGGAGGAGGAAGATACCACCACC										
Mus musculus	RefSeq	ILMN_217788	ILMN_217788	4831426I19RIK	NM_172500.2	NM_172500.2		212073	111607450	NM_172500.2	4831426I19Rik	NP_766088.2	ILMN_3077717	000730221	I	1	GAAAATGCAACCGCTCCACCCGCTGCGAAATCCTGGGCACCCTAGAGTCT	12	-	106247969-106248018	12qE	Mus musculus RIKEN cDNA 4831426I19 gene (4831426I19Rik), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	nesprin-3; MGC106312	nesprin-3; MGC106312
Mus musculus	RefSeq	ILMN_217788	ILMN_217788	4831426I19RIK	NM_172500.2	NM_172500.2		212073	111607450	NM_172500.2	4831426I19Rik	NP_766088.2	ILMN_3156782	001430132	A	4785	CCCAGGAAAAATGAACAGGGCTCGACTTTGGAGCACTTGCCTAACAGGTG	12	-	106168405-106168454	12qE	Mus musculus RIKEN cDNA 4831426I19 gene (4831426I19Rik), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	nesprin-3; MGC106312	nesprin-3; MGC106312
Mus musculus	RefSeq	ILMN_210649	ILMN_210649	FADS1	NM_146094.1	NM_146094.1		76267	22164783	NM_146094.1	Fads1	NP_666206.1	ILMN_2607786	000610274	S	3296	AGCCTAATGTCAGTATCTGTGTGTGCCAATGCTGTTACCACATCCTGGTG	19	+	10265456-10265505	19qA	Mus musculus fatty acid desaturase 1 (Fads1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of an unsaturated fatty acid, any fatty acid containing one or more double bonds between carbon atoms [goid 6636] [evidence ISO]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water [goid 16717] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: linoleoyl-CoA + reduced acceptor + O2 = gamma-linolenoyl-CoA + acceptor + 2 H2O [goid 16213] [evidence ISO]	MGC37858; DSD; 0710001O03Rik; AI317215; A930006B21Rik	MGC37858; DSD; 0710001O03Rik; AI317215; A930006B21Rik
Mus musculus	RefSeq	ILMN_213292	ILMN_213292	ACTL6B	NM_031404.3	NM_031404.3		83766	31982571	NM_031404.3	Actl6b	NP_113581.1	ILMN_2985428	000940386	S	1267	TCTTGGCCTCACTGGGCACATTCCAGCAGATGTGGATCTCCAAACAGGAA	5	+	138005958-138005987:138006356-138006375	5qG2	Mus musculus actin-like 6B (Actl6b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence IDA]	The formation or destruction of chromatin structures [goid 6333] [evidence IC ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	Baf53b; Actl6; ArpNa	Baf53b; Actl6; ArpNa
Mus musculus	MEEBO	ILMN_223825	ILMN_223825	BC014795	scl0208795.23_29				21450146	NM_144794	BC014795		ILMN_2769945	002680717	S	2878	TGGGGAGATGCGTCCAGGAAAGACTTAGTCCCTCTGAGCCCTGGAACACT										
Mus musculus	MEEBO	ILMN_193599	ILMN_193599	A330106H01RIK	scl12618.1.1_23				51708202	XM_130969	A330106H01Rik		ILMN_2498662	007150468	S	14	TCGAAAGAGTCTTCTTCTCCATGATGGGCTGCGGAGCCTGGCGTGCCCAA										
Mus musculus	MEEBO	ILMN_193599	ILMN_193599	A330106H01RIK	scl12618.1.1_23				51708202	XM_130969	A330106H01Rik		ILMN_2498667	004180121	S	20	GAGTCTTCTTCTCCATGATGGGCTGCGGAGCCTGGCGTGCCCAAACTTAC										
Mus musculus	RefSeq	ILMN_184992	ILMN_240139	EEF1D	NM_023240.2	NM_023240.2		66656	54287683	NM_023240.2	Eef1d	NP_075729.2	ILMN_2624018	004050603	S	844	TGTGGTGGAGGATGACAAAGTGGGCACCGACTTGCTCGAGGAGGAGATCA	15	-	75726178-75726227	15qD3	Mus musculus eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) (Eef1d), transcript variant 2, mRNA.	A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	5730529A16Rik; AL023999; 1700026P12Rik	5730529A16Rik; AL023999; 1700026P12Rik
Mus musculus	RefSeq	ILMN_212682	ILMN_212682	CARF	NM_139150.3	NM_139150.3		241066	146149247	NM_139150.3	Carf	NP_631889.1	ILMN_2629161	001820678	S	2321	GTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGATGGGCAGTT				1qC2	Mus musculus calcium response factor (Carf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Als2cr8	Als2cr8
Mus musculus	RefSeq	ILMN_220433	ILMN_220433	CTSS	NM_021281.1	NM_021281.1		13040	10946581	NM_021281.1	Ctss	NP_067256.1	ILMN_1246861	004200646	S	1156	CCAAGTGTGTCGTGATCAATGTGTAGTTACTGTACTAACTAGGTTATAGC	3	+	95360184-95360233	3qF2.1	Mus musculus cathepsin S (Ctss), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222843	ILMN_222843	ZFP653	NM_177318.2	NM_177318.2		319601	31341137	NM_177318.2	Zfp653	NP_796292.1	ILMN_2755621	006020554	S	1821	TTCCACACGCTCAAAAGCCACCCGGACCACAAACCTACCTGACGTGCCCA	9	-	21860141-21860159:21860160-21860190	9qA3	Mus musculus zinc finger protein 653 (Zfp653), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E430039K05Rik	E430039K05Rik
Mus musculus	Riken	ILMN_206631	ILMN_206631	7030412O03RIK	ri|7030412O03|PX00312O05|AK078590|1925					AK078590	7030412O03Rik		ILMN_2581523	004640471	S	1710	GTCAGGGCTGATATGAGAGAAAACACATAAGGGATGTGGGACACCTAACC										
Mus musculus	RefSeq	ILMN_215927	ILMN_215927	MRPL20	NM_025570.2	NM_025570.2		66448	141801166	NM_025570.2	Mrpl20	NP_079846.1	ILMN_2665316	005560523	S	606	CAGTGACACGGCCCCAAACTGTCCTGTAAAGATTGTATAAATAAAGCCTT	4	+	155181072-155181094:155182442-155182468	4qE2	Mus musculus mitochondrial ribosomal protein L20 (Mrpl20), nuclear gene encoding mitochondrial protein, mRNA.	The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	2610008D01Rik; 4930425I20Rik	2610008D01Rik; 4930425I20Rik
Mus musculus	RefSeq	ILMN_197608	ILMN_197608	LOC245094	XM_142457.2	XM_142457.2			38076827	XM_142457.2	LOC245094		ILMN_2528727	007000564	S	388	GCACTTACTTCTGTGCTGCTGAGGCACAGTGCTCCCAGCAAGGCTGGAGC										
Mus musculus	RefSeq	ILMN_192905	ILMN_224823	PDE1B	NM_008800.1	NM_008800.1		18574	6679242	NM_008800.1	Pde1b	NP_032826.1	ILMN_1224034	003360343	S	2827	CAGTGGGCCCTGTTCTTGTGAAGTCCATCTCCATGGTCATTAGACCTGCC	15	+	103360357-103360406	15qF3	Mus musculus phosphodiesterase 1B, Ca2+-calmodulin dependent (Pde1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IMP]	Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]	Pde1b1; 63kDa	Pde1b1; 63kDa
Mus musculus	RefSeq	ILMN_188233	ILMN_246906	TPD52	NM_001025263.1	NM_001025263.1		21985	70608213	NM_001025263.1	Tpd52	NP_001020434.1	ILMN_1253145	001820414	S	1960	GTGACCTAAAGCCTTTTTCAGAGCATGGCTAGATTTAATTGAGGATAAGG	3	-	8929734-8929783	3qA1	Mus musculus tumor protein D52 (Tpd52), transcript variant 3, mRNA.			Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	mD52; AI043038	mD52; AI043038
Mus musculus	Riken	ILMN_203563	ILMN_203563	9330210B09RIK	ri|9330210B09|PX00108K05|AK034518|3264					AK034518	9330210B09Rik		ILMN_1259408	001470373	S	3143	GCCCATCCAGGGAGTCTTGGGGTCTTCATTTAAAAGCTGGCATCTGAGGC										
Mus musculus	Riken	ILMN_206784	ILMN_206784	SYN3	ri|E030046O12|PX00207I11|AK087342|1443					AK087342	Syn3		ILMN_1247037	007100253	S	1097	CTTCTGAGTCACTTTGGGCTGCTCAGGCCTCGCTTCCTGGTTGTCTGGAC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214388	ILMN_214388	PRKCM	NM_008858.1	NM_008858.1		18760	6679350	NM_008858.1	Prkcm	NP_032884.1	ILMN_1226172	007510563	S	1360	CATGAGGGTAGTGCAGTCTGTGAAGCACACGAAGCGGAGGAGCAGCACTG	12	-	51267546-51267595	12qB3	Mus musculus protein kinase C, mu (Prkcm), mRNA.				PKD; PKD1; Pkcm	PKD; PKD1; Pkcm
Mus musculus	RefSeq	ILMN_218092	ILMN_218092	ATP5G2	NM_026468.1	NM_026468.1		67942	13385959	NM_026468.1	Atp5g2	NP_080744.1	ILMN_2691528	003290468	S	329	CTGGCTCTGGGGCAGGGATTGGGACTGTTTTTGGGAGTCTCATCATTGGC	15	-	102493095-102493144	15qF3	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 2 (Atp5g2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	MGC118044; 1810041M08Rik	MGC118044; 1810041M08Rik
Mus musculus	Riken	ILMN_204081	ILMN_204081	5430404L10RIK	ri|A730020N01|PX00149N07|AK042748|1514					AK042748	5430404L10Rik		ILMN_1228770	004250725	S	1328	CTGTAAGACTGCCTCACGGAAACTGACCAAGGGGTCACACAAGAATGAGC										
Mus musculus	RefSeq	ILMN_237530	ILMN_237530	EG632778	NM_001039243.2	NM_001039243.2		632778	142381235	NM_001039243.2	EG632778	NP_001034332.1	ILMN_3161671	004730561	S	689	CTGCGTAGTGTGGTAGGCCCCATGGCCGGTAAGCAATTGAAACGTGGTGG	7	-	26399767-26399816	7qA3	Mus musculus predicted gene, EG632778 (EG632778), mRNA.					
Mus musculus	RefSeq	ILMN_219435	ILMN_219435	LINGO2	NM_175516.2	NM_175516.2		242384	31342073	NM_175516.2	Lingo2	NP_780725.1	ILMN_2949439	002750553	S	2259	CTGCCCCTGTGTCAAAGCAGGGTCCATGGAAGCAGGAAGACTTCTCATGG	4	-	35896894-35896943	4qA5	Mus musculus leucine rich repeat and Ig domain containing 2 (Lingo2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Lrrn6c; B230217C06Rik	Lrrn6c; B230217C06Rik
Mus musculus	RefSeq	ILMN_219435	ILMN_219435	LINGO2	NM_175516.2	NM_175516.2		242384	31342073	NM_175516.2	Lingo2	NP_780725.1	ILMN_2949444	005340193	S	2709	GTTACTCACCAGTATAGATCCAAGTGTGGTTTCACCTTCCTTTTACCTGC	4	-	35896444-35896493	4qA5	Mus musculus leucine rich repeat and Ig domain containing 2 (Lingo2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Lrrn6c; B230217C06Rik	Lrrn6c; B230217C06Rik
Mus musculus	RefSeq	ILMN_199925	ILMN_199925	LOC384076	XM_357404.1	XM_357404.1			38079003	XM_357404.1	LOC384076		ILMN_1233440	000520477	S	56	CTGAGTGTCAGAAGTTTTCTATGTGGTTGAGCAGCAACGCCGTGGCAGAC										
Mus musculus	RefSeq	ILMN_211080	ILMN_211080	THYN1	NM_144543.1	NM_144543.1		77862	21362342	NM_144543.1	Thyn1	NP_653126.1	ILMN_2987062	002490008	S	835	AGAAGGAGAAAGCTTGCTGTATCCACCTGGGGTCGTGTGCACGGATGGTT	9	+	26814836-26814885	9qA4	Mus musculus thymocyte nuclear protein 1 (Thyn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Thy28; MY105; D730042P09Rik; MDS012; HSPC144	Thy28; MY105; D730042P09Rik; MDS012; HSPC144
Mus musculus	RefSeq	ILMN_198542	ILMN_323661	SPACA5	NM_001085393.1	NM_001085393.1		278203	145966884	NM_001085393.1	Spaca5	NP_001078862.1	ILMN_1221425	007040291	S	191	GGCCTCGATGGCTTCAAAGGCTATACTGTTGGAGACTGGCTGTGTGTGGC				XqA1.3-qA2	Mus musculus sperm acrosome associated 5 (Spaca5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]	Gm718	Gm718
Mus musculus	Riken	ILMN_205234	ILMN_205234	E230008O15RIK	ri|E230008O15|PX00209L07|AK053983|2546					AK053983	E230008O15Rik		ILMN_1220312	005690026	S	2377	CACAGCCCTAGCGACTTGCCTTCTCCAACAAGGACACACCTCCAATCCTT										
Mus musculus	RefSeq	ILMN_217076	ILMN_235409	RNF145	NM_028862.2	NM_028862.2		74315	141801878	NM_028862.2	Rnf145	NP_083138.1	ILMN_2678851	003610553	S	3251	CCCCACTCTGCAAACACCACTTTTGAAGCTGTTAATACACTTTGCACCCT	11	+	44378703-44378752	11qB1.1	Mus musculus ring finger protein 145 (Rnf145), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-103H9.1; TMRF1; 3732413I11Rik	RP23-103H9.1; TMRF1; 3732413I11Rik
Mus musculus	RefSeq	ILMN_218485	ILMN_218485	ATOX1	NM_009720.2	NM_009720.2		11927	31981888	NM_009720.2	Atox1	NP_033850.1	ILMN_1232762	005960192	S	381	GGCCTTCCCCGCTGGCTCCCTGCAAGCTTCCATGTAATAAAGTCAAGCTG	11	-	55260152-55260201	11qB1.3	Mus musculus ATX1 (antioxidant protein 1) homolog 1 (yeast) (Atox1), mRNA.		The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IMP]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI256639; Atx1	AI256639; Atx1
Mus musculus	RefSeq	ILMN_197614	ILMN_231729	LOC235852	XR_004414.1	XR_004414.1		235852	94412039	XR_004414.1	LOC235852		ILMN_2528749	004540068	S	288	ATCAAGTTCGACAACCCATACCTAACTCAGGAGAAGCTGATTGAGTACTG					PREDICTED: Mus musculus hypothetical LOC235852 (LOC235852), mRNA.					
Mus musculus	RefSeq	ILMN_216824	ILMN_216824	2610528J11RIK	NM_025572.2	NM_025572.2		66451	118130308	NM_025572.2	2610528J11Rik	NP_079848.1	ILMN_1221084	005220592	S	293	ATCGCGCTGGCTGCCAAGTGCCACCTCTGCCGCCGATACCATGCCAGTTA	4	+	118202200-118202249	4qD2.1	Mus musculus RIKEN cDNA 2610528J11 gene (2610528J11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_224262	ILMN_224262	NYX	scl55038.5.1_251				34328398	NM_173415	Nyx		ILMN_2777524	003800148	S	5186	CCTAACGGGCCATCAGGTGATCAGGCCAATAAACATGCCACGTGTCTGCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215854	ILMN_215854	9230109A22RIK	scl47360.12.1_218	NM_177339.2			31340952	NM_177339.2	9230109A22Rik		ILMN_2664439	002470450	S	1780	AGTCCACAGACAGCTCGCATGTCTATAATGTAATAATAACCTCTTGCCCT										
Mus musculus	RefSeq	ILMN_200500	ILMN_200500	LOC384326	XM_357572.1	XM_357572.1			38082814	XM_357572.1	LOC384326		ILMN_1228689	001710338	S	350	TTCGTGCACAAGTCGGTGTCCGGCTGTTGGGACCTCTTTCCCTATTGTTA										
Mus musculus	RefSeq	ILMN_187543	ILMN_187543	ZW10	NM_012039.1	NM_012039.1		26951	22165348	NM_012039.1	Zw10	NP_036169.1	ILMN_2498763	006590025	S	1875	AAGCTTTGCGAACATGGACGACGAAGAGAATTACTCTGCAGCGAGCAAGG	9	+	48882194-48882243	9qA5.3	Mus musculus ZW10 homolog (Drosophila), centromere/kinetochore protein (Zw10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		6330566F14Rik; MmZw10	6330566F14Rik; MmZw10
Mus musculus	RefSeq	ILMN_187543	ILMN_187543	ZW10	NM_012039.1	NM_012039.1		26951	22165348	NM_012039.1	Zw10	NP_036169.1	ILMN_2445021	001940538	S	2334	CCGTGCCTTGTTCCAGAACACAGAAAGAAGAGCAGCTGCCCTTGCTAAGA	9	+	48886367-48886416	9qA5.3	Mus musculus ZW10 homolog (Drosophila), centromere/kinetochore protein (Zw10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		6330566F14Rik; MmZw10	6330566F14Rik; MmZw10
Mus musculus	RefSeq	ILMN_187543	ILMN_187543	ZW10	NM_012039.1	NM_012039.1		26951	22165348	NM_012039.1	Zw10	NP_036169.1	ILMN_2925558	003400131	S	2368	GCTGCCCTTGCTAAGATTAAATAGCTCCTCCTTGGAGAAAGGCTCTCCTG	9	+	48886401-48886424:48886425-48886450	9qA5.3	Mus musculus ZW10 homolog (Drosophila), centromere/kinetochore protein (Zw10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		6330566F14Rik; MmZw10	6330566F14Rik; MmZw10
Mus musculus	RefSeq	ILMN_186601	ILMN_259586	2610110G12RIK	NM_028476.3	NM_028476.3		73242	142353440	NM_028476.3	2610110G12Rik	NP_082752.2	ILMN_1258929	005900170	S	1689	GGGGATCACCCTTGTGCTACCCCGACTTCTTTTTCCTTCATAGCAAGAGC	17	-	36036988-36037037	17qB1	Mus musculus RIKEN cDNA 2610110G12 gene (2610110G12Rik), mRNA.				3110080J08Rik; 0610011P08Rik; 2610008K08Rik	3110080J08Rik; 0610011P08Rik; 2610008K08Rik
Mus musculus	RefSeq	ILMN_219211	ILMN_219211	SIDT2	NM_172257.1	NM_172257.1		214597	26986550	NM_172257.1	Sidt2	NP_758461.1	ILMN_2838871	000510372	S	3948	TGGCCATTCTGGTCCTTGGCGTTTACAGAGTCACCCAGCTCCAGGCCCCT	9	-	45689093-45689142	9qA5.2	Mus musculus SID1 transmembrane family, member 2 (Sidt2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC36407; CGI-40; MGC58967; BC023957; B930096O19	MGC36407; CGI-40; MGC58967; BC023957; B930096O19
Mus musculus	MEEBO	ILMN_210166	ILMN_210166	7530416G11RIK	scl46878.4.1_95	XM_286715.1			28486665	XM_286715.1	7530416G11Rik		ILMN_1223582	006350338	S	478	TTGAATTCCATGTATGCTGGAGCCTGGTCTCTATTCCACGGCAGACAGTA										
Mus musculus	RefSeq	ILMN_184715	ILMN_229523	DYSF	NM_021469.2	NM_021469.2		26903	116174790	NM_021469.2	Dysf	NP_067444.2	ILMN_2420956	001450068	S	6514	GTGGTCTTGCGCATGTCCATGGAGTTCTTGGGAATCACGTTATTTTCATC	6	+	84160907-84160956	6qC3	Mus musculus dysferlin (Dysf), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]	The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mFLJ00175; 2310004N10Rik; D6Pas3; AI604795	mFLJ00175; 2310004N10Rik; D6Pas3; AI604795
Mus musculus	RefSeq	ILMN_229523	ILMN_229523	DYSF	NM_021469.2	NM_021469.2		26903	116174790	NM_021469.2	Dysf	NP_067444.2	ILMN_3134844	007610398	A	6185	AGCGGCCTGCTGGCCAAGGTCGGGATGAACCCAACATGAATCCGAAGCTA	6	+	84155827-84155876	6qC3	Mus musculus dysferlin (Dysf), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]	The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mFLJ00175; 2310004N10Rik; D6Pas3; AI604795	mFLJ00175; 2310004N10Rik; D6Pas3; AI604795
Mus musculus	RefSeq	ILMN_229523	ILMN_229523	DYSF	NM_021469.2	NM_021469.2		26903	116174790	NM_021469.2	Dysf	NP_067444.2	ILMN_3057828	004490491	I	166	CCCAATGTGAAGAAGGACCGGCGCAGCGATCCAGTTGCCAGCCTGATTTT	6	+	83969548-83969597	6qC3	Mus musculus dysferlin (Dysf), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]	The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mFLJ00175; 2310004N10Rik; D6Pas3; AI604795	mFLJ00175; 2310004N10Rik; D6Pas3; AI604795
Mus musculus	RefSeq	ILMN_184715	ILMN_229523	DYSF	NM_021469.2	NM_021469.2		26903	116174790	NM_021469.2	Dysf	NP_067444.2	ILMN_2674315	002510239	S	6063	CCTTTTTGAGCAGAAGACAGTGAAAGGATGGTGGCCTTGTGTGACAGAGG	6	+	84153283-84153332	6qC3	Mus musculus dysferlin (Dysf), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]	The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mFLJ00175; 2310004N10Rik; D6Pas3; AI604795	mFLJ00175; 2310004N10Rik; D6Pas3; AI604795
Mus musculus	RefSeq	ILMN_198554	ILMN_198554	LOC272763	XM_197560.3	XM_197560.3			38086138	XM_197560.3	LOC272763		ILMN_1234255	001400133	S	916	GGAAACATCAGAGACACCAGCCAGGAGGGAAACTCAGGGAAGTGCCAGGG										
Mus musculus	RefSeq	ILMN_210788	ILMN_321445	2900062L11RIK	NR_003642.1	NR_003642.1		76976	153791985	NR_003642.1	2900062L11Rik		ILMN_2609182	002360040	S	1172	CCTTGTAGGTCCACATTGAATGCCGTTTTCTTATATCTTCTAGGGTGTGT				XqF1	Mus musculus RIKEN cDNA 2900062L11 gene (2900062L11Rik), non-coding RNA.					
Mus musculus	RefSeq	ILMN_223697	ILMN_223697	SH3TC1	NM_194344.1	NM_194344.1		231147	34996510	NM_194344.1	Sh3tc1	NP_919325.1	ILMN_2847906	004570364	S	3748	GGCCACCCATCCTGACAACCTGAGAAGGGGCATATACAAGGGGACTCTTC	5	-	36039924-36039959:36039960-36039973	5qB3	Mus musculus SH3 domain and tetratricopeptide repeats 1 (Sh3tc1), mRNA.				MGC67153; 4631428G15; BC024909	MGC67153; 4631428G15; BC024909
Mus musculus	Riken	ILMN_205816	ILMN_205816	A430034O11RIK	ri|A430034O11|PX00135G06|AK039951|1818					AK039951	A430034O11Rik		ILMN_1223701	000580703	S	1561	AAACAGAATTGCCGTGTCTGGGGAGGGAGGTGGGTCAGAGGGCAAAGTGG										
Mus musculus	RefSeq	ILMN_221578	ILMN_221578	LRRC46	NM_027026.2	NM_027026.2		69297	31982633	NM_027026.2	Lrrc46	NP_081302.2	ILMN_2737412	006060593	S	1077	CCTCAACTCAGACTGCCTCTACTACCAAGAAACAGGTTTCCAAGAACCAG	11	-	96896087-96896136	11qD	Mus musculus leucine rich repeat containing 46 (Lrrc46), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700006D24Rik	1700006D24Rik
Mus musculus	RefSeq	ILMN_253416	ILMN_253416	NUMB	NM_010949.1	NM_010949.1		18222	6754911	NM_010949.1	Numb	NP_035079.1	ILMN_2878726	004780022	S	1656	AGGAAACAGGCATGCAGAAGTCCCTCCAGGCACCTGCCCAGTGGATCCTT	12	-	85136498-85136547	12qD1	Mus musculus numb gene homolog (Drosophila) (Numb), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mnb; m-numb	mnb; m-numb
Mus musculus	RefSeq	ILMN_184426	ILMN_253416	NUMB	NM_010949.1	NM_010949.1		18222	6754911	NM_010949.1	Numb	NP_035079.1	ILMN_2727687	005820333	S	874	CGCCAGCTGTCCCTACGCATCAATGAGTTGCCTTCCACTATGCAGAGGAA	12	-	85141988-85142037	12qD1	Mus musculus numb gene homolog (Drosophila) (Numb), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mnb; m-numb	mnb; m-numb
Mus musculus	RefSeq	ILMN_184426	ILMN_253416	NUMB	NM_010949.1	NM_010949.1		18222	6754911	NM_010949.1	Numb	NP_035079.1	ILMN_2678576	006560167	S	1556	AGACAAGTAGTGCTACCACCAGTCCCTTCTTTAAGCCTCCTGCTCAGCAC	12	-	85136598-85136647	12qD1	Mus musculus numb gene homolog (Drosophila) (Numb), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mnb; m-numb	mnb; m-numb
Mus musculus	RefSeq	ILMN_207465	ILMN_207465	ANK3	NM_170728.1	NM_170728.1			25121951	NM_170728.1	Ank3		ILMN_1260513	000580612	I	160	GGAGGAATAACCAGGGCTTTGCTGGAGAGAACACCCAGTTCCTCCCTGAG						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_210044	ILMN_210044	MRPL13	NM_026759.3	NM_026759.3		68537	142349874	NM_026759.3	Mrpl13	NP_081035.1	ILMN_2601654	003710537	S	186	GTGGAGACCACGTTGTCATAATAAACACAAGACATATTGCATTTTCTGGA	15	-	55379734-55379783	15qD1	Mus musculus mitochondrial ribosomal protein L13 (Mrpl13), nuclear gene encoding mitochondrial protein, mRNA.	The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	1110002D09Rik	1110002D09Rik
Mus musculus	RefSeq	ILMN_209179	ILMN_209179	ADAM26A	NM_010085.1	NM_010085.1		13525	21955287	NM_010085.1	Adam26a	NP_034215.1	ILMN_3004858	006370672	S	2370	TCCTAAAAGAAATTGTGCCAGATTCAGAATTGGGTGAAAAACATCTTACC	8	-	44653660-44653709	8qA4	Mus musculus a disintegrin and metallopeptidase domain 26A (testase 3) (Adam26a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence ISS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Dtgn4; Adam26	Dtgn4; Adam26
Mus musculus	Riken	ILMN_206091	ILMN_206091	D330035D07RIK	ri|D330035D07|PX00318A17|AK052347|3290					AK052347	D330035D07Rik		ILMN_2577481	006510551	S	2465	CAGCTGCCTCGTTGCTCTCCTGTATTTCATCAGCTTTCTTTGAGGATGTG										
Mus musculus	RefSeq	ILMN_185239	ILMN_252409	BC042720	XM_990462.1	XM_990462.1		329178	94365238	XM_990462.1	BC042720	XP_995556.1	ILMN_1253688	004890356	S	39	GGCTTTTTCCAAAGTCTCATTGACCAATCTCCGAAGATCTGCCGTCCCAG					PREDICTED: Mus musculus cDNA sequence BC042720 (BC042720), mRNA.					
Mus musculus	RefSeq	ILMN_220775	ILMN_252409	BC042720	XM_990462.1	XM_990462.1		329178	94365238	XM_990462.1	BC042720	XP_995556.1	ILMN_1227376	003370438	S	8863	CACCGTTCGGATTAGGACCTATTGGGAAAGAGGATTGCTTTCCCTTGCTG					PREDICTED: Mus musculus cDNA sequence BC042720 (BC042720), mRNA.					
Mus musculus	Riken	ILMN_207425	ILMN_207425	PARD3	ri|4832405A21|PX00638G06|AK076429|3021					AK076429	Pard3		ILMN_1218335	006220524	S	2816	AAGCCATGGATCTCAGCTTCCCAGGGCCGATGTGTCTGAATCTGCTCATG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IC ]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200126	ILMN_324488	LOC100045524	XR_031754.1	XR_031754.1		100045524	149258465	XR_031754.1	LOC100045524		ILMN_2537684	006560523	S	443	GAAAAAACATACAAACAGGTGATGGAAATGAACAAAACCATACTAGACCT					PREDICTED: Mus musculus similar to RNP particle component (LOC100045524), misc RNA.					
Mus musculus	Riken	ILMN_205851	ILMN_205851	A730024G14RIK	ri|A730024G14|PX00150M02|AK042789|1407					AK042789	A730024G14Rik		ILMN_2575694	001470546	S	885	GTAAAACCAAGCGCACCAACAAGCGCACCAACACTTGCGAAGATGTCGCT										
Mus musculus	Riken	ILMN_204059	ILMN_204059	SYNJ2	ri|A130073F08|PX00125M21|AK038038|4012					AK038038	Synj2		ILMN_1212797	000270762	S	3662	GAGAGGACACACACAGAGCCGGCACAGGTCAATGCATCGTTGGCTGAGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence TAS]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223416	ILMN_223416	D15ERTD682E	NM_028003.1	NM_028003.1		71919	13386275	NM_028003.1	D15Ertd682e	NP_082279.1	ILMN_2819530	007380180	S	2067	GGCTGACCTCCATGATCGGACGTTGCCGCCTCTGTGTACATTATTTTCCT	15	-	97503282-97503327:97503328-97503331	15qF1	Mus musculus DNA segment, Chr 15, ERATO Doi 682, expressed (D15Ertd682e), mRNA.				2310042P20Rik	2310042P20Rik
Mus musculus	MEEBO	ILMN_222501	ILMN_222501	C130032J12RIK	scl00218975.1_174	NM_178684.2			31341062	NM_178684.2	C130032J12Rik		ILMN_2750523	006940372	S	2716	AGTCTAGGTATCAACAAAGCAGACCTGGTGCAGTCATCCCACCAGCAGGG										
Mus musculus	RefSeq	ILMN_219506	ILMN_219506	OLFR736	NM_146666.1	NM_146666.1		258660	33239345	NM_146666.1	Olfr736	NP_666877.1	ILMN_1220803	006250156	S	590	CAGGCACTGTTCTCATCTGTGGCACTATGAGTTCCCTCCTCATCTTTGGC	14	+	51013022-51013071	14qC1	Mus musculus olfactory receptor 736 (Olfr736), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123591; MOR106-5; MGC123593	MGC123591; MOR106-5; MGC123593
Mus musculus	RefSeq	ILMN_217266	ILMN_217266	CLPTM1L	NM_146047.1	NM_146047.1		218335	22122536	NM_146047.1	Clptm1l	NP_666159.1	ILMN_2681221	004540164	S	1689	AGTATCCCTGAGCACCCTCTCTTCTCGTGTTTCAGAAGGAACCATAGCAC	13	+	73757697-73757746	13qC1	Mus musculus CLPTM1-like (Clptm1l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Crr9; MGC36304; C130052I12Rik	Crr9; MGC36304; C130052I12Rik
Mus musculus	RefSeq	ILMN_214163	ILMN_214163	TPRKB	NM_176842.2	NM_176842.2		69786	31341154	NM_176842.2	Tprkb	NP_789812.1	ILMN_2644950	006110438	S	1737	GCGCCAAGTCTGCAAAGCCAGGTGCTCTCATAGTGCAGTTCTGGGGTTGT	6	+	85879920-85879969	6qC3	Mus musculus Tp53rk binding protein (Tprkb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISA]	mDRWMS1; Cgi-121; 1810034M08Rik; 0610033G21Rik; DRWMS1	mDRWMS1; Cgi-121; 1810034M08Rik; 0610033G21Rik; DRWMS1
Mus musculus	RefSeq	ILMN_214163	ILMN_214163	TPRKB	NM_176842.2	NM_176842.2		69786	31341154	NM_176842.2	Tprkb	NP_789812.1	ILMN_2738991	003390538	S	222	CAGGAGACTTGAGAAAAAAGGCCATGGAAGGATCTATTGATGGTTCATTG	6	+	85874452-85874501	6qC3	Mus musculus Tp53rk binding protein (Tprkb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISA]	mDRWMS1; Cgi-121; 1810034M08Rik; 0610033G21Rik; DRWMS1	mDRWMS1; Cgi-121; 1810034M08Rik; 0610033G21Rik; DRWMS1
Mus musculus	RefSeq	ILMN_214163	ILMN_214163	TPRKB	NM_176842.2	NM_176842.2		69786	31341154	NM_176842.2	Tprkb	NP_789812.1	ILMN_2811240	007610731	S	1710	AGTTCTGCCCCTCCAGTCCCCTCTAAAGCGCCAAGTCTGCAAAGCCAGGT	6	+	85879893-85879942	6qC3	Mus musculus Tp53rk binding protein (Tprkb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISA]	mDRWMS1; Cgi-121; 1810034M08Rik; 0610033G21Rik; DRWMS1	mDRWMS1; Cgi-121; 1810034M08Rik; 0610033G21Rik; DRWMS1
Mus musculus	MEEBO	ILMN_188796	ILMN_188796	SCL0001416.1_21	scl0001416.1_21	AK085517.1			26102779	AK085517.1	scl0001416.1_21		ILMN_1260127	006280709	S	2	GCAGGCCAAAAGAGGACATCAGATCTCATTACAGATGGTTGTGAGCCATC										
Mus musculus	RefSeq	ILMN_184281	ILMN_184281	ZDHHC7	NM_133967.3	NM_133967.3		102193	50054240	NM_133967.3	Zdhhc7	NP_598728.1	ILMN_1214054	003190373	S	2747	GTCTCACCCTCCAGTGTGGAGTCTGTGCGGTGAACCCAAGCTGAGTATAC	8	-	122605052-122605101	8qE1	Mus musculus zinc finger, DHHC domain containing 7 (Zdhhc7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IDA]	AL024087; Gramp2	AL024087; Gramp2
Mus musculus	RefSeq	ILMN_209421	ILMN_209421	IDH2	NM_173011.1	NM_173011.1		269951	27370515	NM_173011.1	Idh2	NP_766599.1	ILMN_2595612	002510390	S	1592	CAGTGTTCTGCATACTGTAATTTATATTGCTCTGGAATCACATGGTGCCA	7	-	87239764-87239813	7qD3	Mus musculus isocitrate dehydrogenase 2 (NADP+), mitochondrial (Idh2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate [goid 6097] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle [goid 6102] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+ [goid 4450] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]	IDPm; E430004F23; Idh-2	IDPm; E430004F23; Idh-2
Mus musculus	RefSeq	ILMN_185954	ILMN_259585	9930021J03RIK	NM_172836.2	NM_172836.2		240613	142377223	NM_172836.2	9930021J03Rik	NP_766424.1	ILMN_2626694	005090647	S	1881	TTTCACACTTATATTGATACGTTTCTTCTTGAATTTGGATTGTTGTGGTG	19	-	29790097-29790146	19qC1	Mus musculus RIKEN cDNA 9930021J03 gene (9930021J03Rik), mRNA.				mKIAA2026; KIAA2026	mKIAA2026; KIAA2026
Mus musculus	MEEBO	ILMN_190411	ILMN_190411	SCL000806.1_69	scl000806.1_69	AK044734.1			26336746	AK044734.1	scl000806.1_69		ILMN_1227931	006420653	S	2	GCTGGTGGACGGACTGGTTCCTTGCTCACACTACATGGTACAAGTGAATG										
Mus musculus	RefSeq	ILMN_216394	ILMN_216394	ATE1	NM_013799.2	NM_013799.2		11907	31542150	NM_013799.2	Ate1	NP_038827.2	ILMN_1230730	002190619	S	4573	CGAGTTATTCAGTGTGCGTTCCTCTCCTACGGGAACCACTGGCCAGAAGG	7	-	137535078-137535127	7qF3	Mus musculus arginyltransferase 1 (Ate1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The posttranslational conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway [goid 16598] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Catalysis of the reaction: L-arginyl-tRNA + protein = tRNA + L-arginyl-protein [goid 4057] [evidence IDA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AI225793; AW547406	AI225793; AW547406
Mus musculus	RefSeq	ILMN_217671	ILMN_217671	FAM118B	NM_194257.1	NM_194257.1		109229	34787416	NM_194257.1	Fam118b	NP_919233.1	ILMN_2686178	000270259	S	426	CTGTTTATATGAAGTATTTGATGACCTGGAATCAAAGATGGAAGATTCTG	9	-	35034892-35034941	9qA4	Mus musculus family with sequence similarity 118, member B (Fam118b), transcript variant 1, mRNA.				2700018L24Rik; C030004A17Rik; 2310022O21Rik	2700018L24Rik; C030004A17Rik; 2310022O21Rik
Mus musculus	RefSeq	ILMN_210012	ILMN_210012	CYB5R4	NM_024195.1	NM_024195.1		266690	28916666	NM_024195.1	Cyb5r4	NP_077157.1	ILMN_3008475	004610468	S	1095	TCTCTTTCTATTGGCAGCCGGAACAGGATTCACACCAATGGTCACTGTAC	9	+	86953827-86953876	9qE3.1	Mus musculus cytochrome b5 reductase 4 (Cyb5r4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways involving heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 42168] [evidence ISA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence ISA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence ISA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence IDA]	b5/b5r; Ncb5or; Cb5cb5r; b5b5r; 2810034J18Rik; B5+B5R; C79736	b5/b5r; Ncb5or; Cb5cb5r; b5b5r; 2810034J18Rik; B5+B5R; C79736
Mus musculus	RefSeq	ILMN_210012	ILMN_210012	CYB5R4	NM_024195.1	NM_024195.1		266690	28916666	NM_024195.1	Cyb5r4	NP_077157.1	ILMN_2601344	004920010	S	100	AAAGAAGATTGTTGGATATGCATAAGAGGGTTTGTTTACAACGTCAGCCC	9	+	86921908-86921935:86924339-86924360	9qE3.1	Mus musculus cytochrome b5 reductase 4 (Cyb5r4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways involving heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 42168] [evidence ISA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence ISA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence ISA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence IDA]	b5/b5r; Ncb5or; Cb5cb5r; b5b5r; 2810034J18Rik; B5+B5R; C79736	b5/b5r; Ncb5or; Cb5cb5r; b5b5r; 2810034J18Rik; B5+B5R; C79736
Mus musculus	RefSeq	ILMN_214993	ILMN_214993	PDK1	NM_172665.3	NM_172665.3		228026	142377025	NM_172665.3	Pdk1	NP_766253.2	ILMN_1229318	003990324	S	2710	CACTGTCCACTGTCTGGGATATTTATAACCTCCTCTGTTAGGTGATGGGG	2	+	71739488-71739537	2qC3	Mus musculus pyruvate dehydrogenase kinase, isoenzyme 1 (Pdk1), nuclear gene encoding mitochondrial protein, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The posttranslational phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine) [goid 18106] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine [goid 4673] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate dehydrogenase (acetyl-transferring) = ADP + pyruvate dehydrogenase (acetyl-transferring) phosphate [goid 4740] [evidence IEA]	D530020C15Rik; B830012B01	D530020C15Rik; B830012B01
Mus musculus	RefSeq	ILMN_200991	ILMN_200991	LOC381940	XM_355964.1	XM_355964.1			38087747	XM_355964.1	LOC381940		ILMN_2540719	006450037	S	260	TACCTAAAGCCCGGGTGGTAGCCTGCTTCTGTGAAGGCATGACAGTTCGA										
Mus musculus	RefSeq	ILMN_203177	ILMN_240726	TAOK3	NM_001081308.1	NM_001081308.1		330177	124486800	NM_001081308.1	Taok3	NP_001074777.1	ILMN_1259320	004040136	S	958	CCCTCTACCACATCGCTCAGAATGACTCCCCCACGCTACAGTCCAGGGAA	5	+	117665400-117665449	5qF	Mus musculus TAO kinase 3 (Taok3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	A430105I05Rik; A130052D22	A430105I05Rik; A130052D22
Mus musculus	RefSeq	ILMN_197955	ILMN_240351	GM813	NM_001033404.2	NM_001033404.2		328695	141803319	NM_001033404.2	Gm813	NP_001028576.1	ILMN_2529961	004390092	S	244	CCGAAAGAGGTAATAAGGTCTGCATTCCGGAAATTCAGAGGCCTGAAATA	16	-	58614815-58614827:58615826-58615862	16qC1.2	Mus musculus gene model 813, (NCBI) (Gm813), mRNA.				Gm1781	Gm1781
Mus musculus	RefSeq	ILMN_195141	ILMN_250751	STEAP3	NM_133186.1	NM_133186.1		68428	18875325	NM_133186.1	Steap3	NP_573449.1	ILMN_1244848	000620072	S	1848	CAGACACTCTGGTATAGGGAGAAACTGGCTTTTCGGGGGACTTCTCCTAC	1	-	122054797-122054846	1qE2.3	Mus musculus STEAP family member 3 (Steap3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence ISA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The regulated release of proteins from a cell or group of cells [goid 9306] [evidence ISA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IMP]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 2 Fe2+ + NAD+ = 2 Fe3+ + NADH + H+ [goid 293] [evidence IDA]; Catalysis of the reaction: 2 Fe2+ + NAD+ = 2 Fe3+ + NADH + H+ [goid 293] [evidence IMP]	Tsap6; 1010001D01Rik; pHyde	Tsap6; 1010001D01Rik; pHyde
Mus musculus	RefSeq	ILMN_195280	ILMN_249833	ARID5A	NM_145996.3	NM_145996.3		214855	141803361	NM_145996.3	Arid5a	NP_666108.2	ILMN_2718453	003180736	S	4235	GCTGGGAATTTTCCTTTGAAGACCTTGCGAATGGCTACAGGAGGTGATGG	1	+	36379605-36379654	1qB	Mus musculus AT rich interactive domain 5A (MRF1-like) (Arid5a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Mrf1; D430024K22Rik; MGC36895	Mrf1; D430024K22Rik; MGC36895
Mus musculus	RefSeq	ILMN_210044	ILMN_210044	MRPL13	NM_026759.2	NM_026759.2		68537	27229071	NM_026759.2	Mrpl13	NP_081035.1	ILMN_2982192	001110577	S	655	CTCCCTGTGGGGAACACTCAAGAAGGCCAAGCCTCAGCAGGAAAGTGCAG	15	-	55364259-55364308	15qD1	Mus musculus mitochondrial ribosomal protein L13 (Mrpl13), mRNA.	The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	1110002D09Rik	1110002D09Rik
Mus musculus	RefSeq	ILMN_210044	ILMN_210044	MRPL13	NM_026759.2	NM_026759.2		68537	27229071	NM_026759.2	Mrpl13	NP_081035.1	ILMN_2982200	003400424	S	715	TGTTTTACAGACAAGTCCTGTGTAACCTGCTTTAAATGCTACACATGTTA	15	-	55364199-55364248	15qD1	Mus musculus mitochondrial ribosomal protein L13 (Mrpl13), mRNA.	The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	1110002D09Rik	1110002D09Rik
Mus musculus	RefSeq	ILMN_208745	ILMN_246671	MFSD2	NM_029662.1	NM_029662.1		76574	58037448	NM_029662.1	Mfsd2	NP_083938.1	ILMN_1225764	002350368	S	1957	AGGGCTGCTACTGTGAATATGCCAAGGACTGACTGGGCCTAGCTCGGAAC	4	-	122624219-122624268	4qD2.2	Mus musculus major facilitator superfamily domain containing 2 (Mfsd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	1700018O18Rik	1700018O18Rik
Mus musculus	RefSeq	ILMN_221432	ILMN_227835	LOC670089	XR_002791.1	XR_002791.1		670089	94396009	XR_002791.1	LOC670089		ILMN_2735554	006480239	S	98	GCGTGCAGGCCCTGCCCCCCTCAAATCTTTGAATTGGGTCAACAGACACT					PREDICTED: Mus musculus similar to coronin, actin binding protein 1C (LOC670089), mRNA.					
Mus musculus	RefSeq	ILMN_261726	ILMN_261726	ALG6	NM_001081264.1	NM_001081264.1		320438	124486912	NM_001081264.1	Alg6	NP_001074733.1	ILMN_3040759	003840424	I	724	TGGGGTGTTCTTGGAGTATCTTGGGACTGGGACCTGCTAGGGTCACTGGC	4	+	99410477-99410526	4qC6	Mus musculus asparagine-linked glycosylation 6 homolog (yeast, alpha-1,3,-glucosyltransferase) (Alg6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 46527] [evidence ISO]	E230028F23Rik	E230028F23Rik
Mus musculus	RefSeq	ILMN_186083	ILMN_261726	ALG6	NM_001081264.1	NM_001081264.1		320438	124486912	NM_001081264.1	Alg6	NP_001074733.1	ILMN_1242540	002370736	S	2969	AATCATGGCTAACACCGGCTCTGTCCCATTGGTAGGGTTATCCCTTCACC	4	+	99430006-99430055	4qC6	Mus musculus asparagine-linked glycosylation 6 homolog (yeast, alpha-1,3,-glucosyltransferase) (Alg6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 46527] [evidence ISO]	E230028F23Rik	E230028F23Rik
Mus musculus	RefSeq	ILMN_199501	ILMN_247247	LOC633945	XR_002499.1	XR_002499.1		633945	94394260	XR_002499.1	LOC633945		ILMN_1217236	005050368	S	237	CTGGCTGGCCAGTGGACCAGGTTCAATGCTTTCAGGGACTACAATGGTCA					PREDICTED: Mus musculus hypothetical LOC633945 (LOC633945), mRNA.					
Mus musculus	RefSeq	ILMN_208733	ILMN_208733	CHD6	NM_173368.2	NM_173368.2		71389	61742811	NM_173368.2	Chd6	NP_775544.2	ILMN_1255531	001980338	S	3130	TATTTCCTTGGATGACCCTAATTTTTGGCAGAAATGGGCTAAAATAGCTG	2	-	160814021-160814070	2qH2	Mus musculus chromodomain helicase DNA binding protein 6 (Chd6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	5430439G14Rik; 6330406J24Rik	5430439G14Rik; 6330406J24Rik
Mus musculus	RefSeq	ILMN_206883	ILMN_208733	CHD6	NM_173368.2	NM_173368.2		71389	61742811	NM_173368.2	Chd6	NP_775544.2	ILMN_1252290	004610170	S	10177	CTCTCCCAGCTTCCACCTAAACTTCCAAGTAGGTCACAGGGTCCGCTGCG	2	-	160773036-160773085	2qH2	Mus musculus chromodomain helicase DNA binding protein 6 (Chd6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	5430439G14Rik; 6330406J24Rik	5430439G14Rik; 6330406J24Rik
Mus musculus	RefSeq	ILMN_221123	ILMN_221123	RCHY1	NM_026557.3	NM_026557.3		68098	133892747	NM_026557.3	Rchy1	NP_080833.1	ILMN_1255376	005260091	S	1292	ATGTAATAGAGCTTACTGGGTGATTGTAATAGCGATTACTGGGTGAAGCC	5	-	92378555-92378604	5qE2	Mus musculus ring finger and CHY zinc finger domain containing 1 (Rchy1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARNIP; PRO1996; CHIMP; AU042618; Zfp363; Pirh2; mARNIP; 6720407C15Rik	ARNIP; PRO1996; CHIMP; AU042618; Zfp363; Pirh2; mARNIP; 6720407C15Rik
Mus musculus	MEEBO	ILMN_215666	ILMN_215666	CACNG4	scl39411.4.1_30	NM_019431.1			9506454	NM_019431.1	Cacng4		ILMN_2662214	002120431	S	785	CCTGAAGATCACCGGAGCCATTCCCATGGGTGAGCTGTCCATGTACACGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IGI]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]		
Mus musculus	Riken	ILMN_204392	ILMN_204392	ANKRA2	ri|A130001L21|PX00120M10|AK037263|1887					AK037263	Ankra2		ILMN_1257723	000830162	S	954	GCTAGCCTAATCGGCTTAGTGAGTTCCAGACCATGCAGGGATTCATAGTG						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_196107	ILMN_196107	BCCIP	scl000029.1_66						Bccip		ILMN_2521678	004670086	S	5	AGTTTTTAACCAATCATTCATAATTTGACCAAAATAAAGAAAAAAATCAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Cyclin-dependent protein kinase (CDK) complex found in the nucleus [goid 19908] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence ISO]	Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19207] [evidence ISO]		
Mus musculus	RefSeq	ILMN_219178	ILMN_219178	ST8SIA2	NM_009181.1	NM_009181.1		20450	6677964	NM_009181.1	St8sia2	NP_033207.1	ILMN_2705294	001850010	S	5014	GGCCCTGTGCCTTTGGCCTTGCAGTTCGCATCTTCTGGATCATTCTTGAG	7	-	81084296-81084345	7qD2	Mus musculus ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 (St8sia2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IDA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]	ST8SiaII; AI323367; Siat8b; STX	ST8SiaII; AI323367; Siat8b; STX
Mus musculus	RefSeq	ILMN_197781	ILMN_197781	LOC381515	XM_355473.1	XM_355473.1			38078082	XM_355473.1	LOC381515		ILMN_1255872	002940338	S	446	TGGACATTGCCGTCCCATGCAACAACAAGGAAGACTGGAGTGCGCAGCCA										
Mus musculus	MEEBO	ILMN_188634	ILMN_188634	4930432O21RIK	scl074670.2_30				51770065	XM_128440	4930432O21Rik		ILMN_2454358	002100164	S	20	ATTTTAAAAATGCAGAATATTTTGAATAGAGAAAGATCTGTTGGTTGTGA								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216206	ILMN_216206	KIF21B	scl17427.31.1_41	NM_019962.2			41327745	NM_019962.2	Kif21b		ILMN_1244605	005690725	S	4793	CCCACAACTTTGAGCCCCCTCACTATGATGGTATTGAATGCCTGGCTATC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216206	ILMN_216206	KIF21B	scl17427.31.1_41	NM_019962.2			41327745	NM_019962.2	Kif21b		ILMN_2668449	006980400	S	4806	GCCCCCTCACTATGATGGTATTGAATGCCTGGCTATCCAAGGAGACATAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]		
Mus musculus	Riken	ILMN_205356	ILMN_205356	D030034I04RIK	ri|D030034I04|PX00179N04|AK050914|1324					AK050914	D030034I04Rik		ILMN_2571934	006280681	S	119	CTCGAGGGGTCTCAGGCATCTGTATTTGCTGCTGTCTGCTACTAAAGAGC										
Mus musculus	RefSeq	ILMN_246122	ILMN_246122	DEFCR21	NM_183253.1	NM_183253.1		66298	46518550	NM_183253.1	Defcr21	NP_899076.1	ILMN_2943256	001450239	S	116	CACAGATGAAGAGACTAATACTGAGGAGCAGCCAGGGGAAGATGACCAGG	8	+	22520411-22520460	8qA2	Mus musculus defensin related cryptdin 21 (Defcr21), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		2010016B13Rik	2010016B13Rik
Mus musculus	MEEBO	ILMN_189535	ILMN_189535	DGKQ	scl26246.23_552				39841022	NM_199011	Dgkq		ILMN_2462151	004810008	S	19	GAAGGAGGATCGCCTGTATGGTCACATGCAGGTCAGAGCAAGGCATAGGA								Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197096	ILMN_231970	LOC629925	XM_987504.1	XM_987504.1		629925	94394537	XM_987504.1	LOC629925	XP_992598.1	ILMN_1222242	007200370	S	101	GGTCCTCAGTGAAGTTGTCCTGCAAGGATTCTTACTTTGCCTTCATGGCC				12qF2	PREDICTED: Mus musculus similar to Ig heavy chain V region 108A precursor (LOC629925), mRNA.					
Mus musculus	Riken	ILMN_206492	ILMN_206492	D430043P15RIK	ri|D430043P15|PX00195H05|AK085149|3508					AK085149	D430043P15Rik		ILMN_1239890	007380736	S	2892	CCTGCCTGAACTGCCAGAGATCTTATCAAAAACAAACAACCCCCCCCCCA										
Mus musculus	RefSeq	ILMN_221554	ILMN_221554	SSR3	NM_026155.1	NM_026155.1		67437	21312967	NM_026155.1	Ssr3	NP_080431.1	ILMN_2838645	000540390	S	2446	CATGCAGCCAGTGTATCAGCCCTTTGTACTTAGAAGTGTGGCCCCTCCTC	3	-	65467975-65468024	3qE1	Mus musculus signal sequence receptor, gamma (Ssr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]; A translocation complex that constitutes the specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. Composed of a heterotetramer of alpha, beta, gamma and delta subunits (translocon-associated proteins or TRAPs). In yeast it is a heterotrimeric complex consisting of Sec61p, Sbh1p, and Sss1p. The Sec61 complex functions in cotranslational and posttranslational translocation events [goid 5784] [evidence IEA]	The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria [goid 6613] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AL022999; AW553833; TRAPG; 0610038P07Rik; AU022074	AL022999; AW553833; TRAPG; 0610038P07Rik; AU022074
Mus musculus	RefSeq	ILMN_215035	ILMN_234744	RPS11	NM_013725.3	NM_013725.3		27207	145386557	NM_013725.3	Rps11	NP_038753.1	ILMN_2654791	001410161	S	317	GAGGACCATTGTCATCCGCCGGGACTATCTCCATTACATCCGAAAGTACA				7qB4	Mus musculus ribosomal protein S11 (Rps11), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194684	ILMN_194684	ZFP609	NM_172536.1	NM_172536.1		214812	27369755	NM_172536.1	Zfp609	NP_766124.1	ILMN_2810296	007320687	S	3967	TGGTGGCAGCTGTGGCAGTGTTGCGGGAGCAGGAGGTACTGACAGGAGTG	9	-	65544949-65544998	9qC	Mus musculus zinc finger protein 609 (Zfp609), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC016271; mKIAA0295; 9830165N24	BC016271; mKIAA0295; 9830165N24
Mus musculus	RefSeq	ILMN_194684	ILMN_194684	ZFP609	NM_172536.1	NM_172536.1		214812	27369755	NM_172536.1	Zfp609	NP_766124.1	ILMN_1214222	004560020	S	3829	GAGCTGTAAAGCCAGCTCAGAGTCCAAAGCCCTGGACATCTTGCAGCAAC	9	-	65545332-65545381	9qC	Mus musculus zinc finger protein 609 (Zfp609), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC016271; mKIAA0295; 9830165N24	BC016271; mKIAA0295; 9830165N24
Mus musculus	RefSeq	ILMN_217737	ILMN_217737	FAM129B	NM_146119.1	NM_146119.1		227737	22122640	NM_146119.1	Fam129b	NP_666231.1	ILMN_2686975	004290324	S	3515	GCCTTGGGGGTTTCCACCATCCTTCCAGATATGGTATGAAGAATCTATGC	2	+	32780686-32780735	2qB	Mus musculus family with sequence similarity 129, member B (Fam129b), mRNA.					
Mus musculus	RefSeq	ILMN_222927	ILMN_222927	PDGFRB	NM_008809.1	NM_008809.1		18596	6679258	NM_008809.1	Pdgfrb	NP_032835.1	ILMN_2903972	006350753	S	4766	CCCCGTCCCCAGGGAGCACCCCACAGAAACAGTTCTAACCCTGAACCAAT	18	+	61244368-61244417	18qE1	Mus musculus platelet derived growth factor receptor, beta polypeptide (Pdgfrb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IMP]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Pdgfr; AI528809; CD140b	Pdgfr; AI528809; CD140b
Mus musculus	RefSeq	ILMN_209974	ILMN_255240	ALS2CR13	NM_001037725.2	NM_001037725.2		72750	142368733	NM_001037725.2	Als2cr13	NP_001032814.1	ILMN_2600991	006020259	S	5418	CAGCATTTCCAGTGATGATAAGTATTGTTGTGGACTGTGTCCCTGAACCT	1	+	60042076-60042125	1qC2	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 13 (human) (Als2cr13), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6330416D14Rik; 2810425F24Rik; MGC90831	6330416D14Rik; 2810425F24Rik; MGC90831
Mus musculus	RefSeq	ILMN_196402	ILMN_255240	ALS2CR13	NM_001037725.2	NM_001037725.2		72750	142368733	NM_001037725.2	Als2cr13	NP_001032814.1	ILMN_1245942	005390196	S	4085	CTATCCTTGAAGTAACAGAGAGGGACAGGTTTCAGGTCAGCATCTGCTCC	1	+	60040743-60040792	1qC2	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 13 (human) (Als2cr13), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6330416D14Rik; 2810425F24Rik; MGC90831	6330416D14Rik; 2810425F24Rik; MGC90831
Mus musculus	RefSeq	ILMN_200347	ILMN_200347	LOC386271	XM_359150.1	XM_359150.1			38081386	XM_359150.1	LOC386271		ILMN_1218483	001230537	S	2050	TATCCAGAAGATGCCCCAACTGACATCTACACAATGGAGTACTACTCAGC										
Mus musculus	MEEBO	ILMN_185125	ILMN_185125	NPR3	scl47387.11_38				6679115	NM_008728	Npr3		ILMN_2604333	006040192	S	1450	TCGGGGCCCTACTAGGTGCTGGCTTGCTAATGGCCTTCTACTTTTTCAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210831	ILMN_210831	ACTG2	NM_009610.1	NM_009610.1		11468	6752951	NM_009610.1	Actg2	NP_033740.1	ILMN_2839313	001980209	S	1191	TCCCCACAAGACTGCTGTCACCAGCCACAGATCATTAAAACCTTCAAGCC	6	-	83462905-83462917:83462918-83462954	6qC3	Mus musculus actin, gamma 2, smooth muscle, enteric (Actg2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SMGA; Act4; ACTA3; Act-4	SMGA; Act4; ACTA3; Act-4
Mus musculus	RefSeq	ILMN_197017	ILMN_257489	9430070O13RIK	NM_001033180.2	NM_001033180.2		77352	142353474	NM_001033180.2	9430070O13Rik	NP_001028352.1	ILMN_1247154	007610528	S	1105	ACGCTTACAGGAAAACTGGACAGATATCGGGTTTGGGATACTGAGTCGCC	1	-	158306728-158306777	1qG3	Mus musculus RIKEN cDNA 9430070O13 gene (9430070O13Rik), mRNA.				Gm979	Gm979
Mus musculus	RefSeq	ILMN_190692	ILMN_257489	9430070O13RIK	NM_001033180.2	NM_001033180.2		77352	142353474	NM_001033180.2	9430070O13Rik	NP_001028352.1	ILMN_1231335	001030544	S	1560	CAGCTGCCCGCATTCAACAATACACCGATTGCTGATTTATCATATTAGGG	1	-	158295604-158295653	1qG3	Mus musculus RIKEN cDNA 9430070O13 gene (9430070O13Rik), mRNA.				Gm979	Gm979
Mus musculus	RefSeq	ILMN_208886	ILMN_208886	SERPINB9E	NM_011456.2	NM_011456.2		20710	118130179	NM_011456.2	Serpinb9e	NP_035586.1	ILMN_3006459	003120035	S	1238	TTGGCAACTCTACCACTTCTACTGCTCTGTGAGAATGGACAAGTGGGTGG	13	+	33352032-33352081	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 9e (Serpinb9e), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ovalbumin; NK26; Spi14; AW540195	ovalbumin; NK26; Spi14; AW540195
Mus musculus	RefSeq	ILMN_208886	ILMN_208886	SERPINB9E	NM_011456.2	NM_011456.2		20710	118130179	NM_011456.2	Serpinb9e	NP_035586.1	ILMN_2590485	004760035	S	1070	GCCTCTGCTGGCAAAATTATACTTTTCTGTGATGGTCCTGATCCCGAAGT	13	+	33351864-33351913	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 9e (Serpinb9e), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ovalbumin; NK26; Spi14; AW540195	ovalbumin; NK26; Spi14; AW540195
Mus musculus	Riken	ILMN_203254	ILMN_203254	6430587E11RIK	ri|6430587E11|PX00102N05|AK032541|1983					AK032541	6430587E11Rik		ILMN_1231730	004180228	S	1639	ATTGCCGAGTGGGGCTGCTGAGTTTCCTGCCGTGCAAGTCTGATGACCTC										
Mus musculus	MEEBO	ILMN_192504	ILMN_192504	COX5B	scl47494.1.1_88				6753499	NM_009942	Cox5b		ILMN_1241962	002570373	S	241	CCTCCAAAGGCAGCTTCAGGCACCAAGGAAGACCCTAATCTAGTCCCGTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192504	ILMN_192504	COX5B	scl47494.1.1_88				6753499	NM_009942	Cox5b		ILMN_1227230	000940133	S	20	TCCATATCATAGGAAATATAAAATCTTGTCAAAGGAAATGAGCTTGACTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191142	ILMN_191142	AMBIONRNASPIKE2_EC12	AmbionRNASpike2_EC12						AmbionRNASpike2_EC12		ILMN_2476484	001470646	S	12	CATCCAGCGTGGACACATCTGTCGGCCATACCACTTCGCGCAACAGATCG										
Mus musculus	RefSeq	ILMN_199875	ILMN_199875	LOC384029	XM_357380.1	XM_357380.1			38078497	XM_357380.1	LOC384029		ILMN_2536800	002490440	S	1228	GCTCCAACAAAGACTAATGACCCTGGAATGGGTGCAATGGATGGAAAGGC										
Mus musculus	RefSeq	ILMN_192012	ILMN_225359	RASA1	NM_145452.2	NM_145452.2		218397	118130145	NM_145452.2	Rasa1	NP_663427.1	ILMN_1237573	006900563	S	2433	CATCAGGTAGCAGCCTGTGTTCTGCGTGGATTCAGTATGCCCACCGTGGT	13	-	85355668-85355708:85355709-85355717	13qC3	Mus musculus RAS p21 protein activator 1 (Rasa1), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC7759; Gap; RasGAP; Rasa	MGC7759; Gap; RasGAP; Rasa
Mus musculus	RefSeq	ILMN_195968	ILMN_233195	NDUFA13	NM_023312.2	NM_023312.2		67184	55742659	NM_023312.2	Ndufa13	NP_075801.1	ILMN_2649937	001070189	S	1195	CACCTGGTACACTTAGGGCCTGAGCCAACGCACATAATAAAGAGTGGTCA	8	-	72418085-72418119:72418120-72418134	8qB3.3	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 (Ndufa13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence TAS]	CDA016; Grim19; CGI-39; 2700054G14Rik; GRIM-19; AU022060	CDA016; Grim19; CGI-39; 2700054G14Rik; GRIM-19; AU022060
Mus musculus	RefSeq	ILMN_211211	ILMN_211211	PROP1	NM_008936.1	NM_008936.1		19127	6679480	NM_008936.1	Prop1	NP_032962.1	ILMN_2613646	003800047	S	850	CCCCCACCCATGTTTCCCCTCAGCCTTGAGACGCCAAAGTCCTGGAACTA	11	-	50764408-50764457	11qB1.3	Mus musculus paired like homeodomain factor 1 (Prop1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion [goid 48732] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IGI]; The process by which the anatomical structures of the hypophysis are generated and organized. Morphogenesis pertains to the creation of form. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 48850] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The differentiation of cells that will contribute to the structure and function of the hypothalamus [goid 21979] [evidence IMP]; The process whereby a relatively unspecialized cell, acquires specialized structural and/or functional features of a somatotropin secreting cell. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin [goid 60126] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	df; Prop-1	df; Prop-1
Mus musculus	RefSeq	ILMN_218361	ILMN_218361	MFI2	NM_013900.2	NM_013900.2		30060	118130939	NM_013900.2	Mfi2	NP_038928.1	ILMN_1254745	001580619	S	3902	CTCTGAGCTGGGGACTTCACAGTGAGAAGTGTACTCTGTGTGGGCGACTG	16	+	31898875-31898924	16qB2	Mus musculus antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 (Mfi2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]	CD228; MTf	CD228; MTf
Mus musculus	RefSeq	ILMN_218361	ILMN_218361	MFI2	NM_013900.2	NM_013900.2		30060	118130939	NM_013900.2	Mfi2	NP_038928.1	ILMN_2694795	006330112	S	2335	AGACCGCTGCTTCAGGCCACGCCCAGAGCAGGGAAAGCTACAGAGCTCAA	16	+	31897308-31897357	16qB2	Mus musculus antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 (Mfi2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]	CD228; MTf	CD228; MTf
Mus musculus	Riken	ILMN_202078	ILMN_202078	ZFHX1B	ri|2700045H19|ZX00063B13|AK012377|1048					AK012377	Zfhx1b		ILMN_1229830	006560037	S	436	CCATCGCCCTTCTGGAGTAGAGAGCAGAGCTGTTGGCAGATGATGAAGTG										
Mus musculus	Riken	ILMN_205198	ILMN_205198	D030024D02RIK	ri|D030024D02|PX00179H19|AK050836|1779					AK050836	D030024D02Rik		ILMN_2570738	005870598	S	1638	CAAGGAGCCGCCAAATATTATGATGAGGATCGGCCTCCACTTATGGCCTC										
Mus musculus	RefSeq	ILMN_221184	ILMN_221184	KPNA1	NM_008465.4	NM_008465.4		16646	145966755	NM_008465.4	Kpna1	NP_032491.2	ILMN_1250856	005390239	S	3615	GTTACCAATGGAGCAGATACCACAAAACTAGTCAACTCCCGTCTGTCCTG				16qB3	Mus musculus karyopherin (importin) alpha 1 (Kpna1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Rch2; AW494490; NPI1; IPOA5; mSRP1	Rch2; AW494490; NPI1; IPOA5; mSRP1
Mus musculus	RefSeq	ILMN_218362	ILMN_218362	RPUSD3	XM_132830.8	XM_132830.8		101122	94378026	XM_132830.8	Rpusd3	XP_132830.4	ILMN_1214740	000630059	S	1063	GCCTGACCCCAGATGGAAAATAGGAAGAATAAGGCGAGTGGAGTTGGTGC	6	-	113365469-113365518	6qE3	PREDICTED: Mus musculus RNA pseudouridylate synthase domain containing 3, transcript variant 1 (Rpusd3), mRNA.		The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]		
Mus musculus	RefSeq	ILMN_207500	ILMN_207500	B3GNT5	XM_147186.1	XM_147186.1			20892018	XM_147186.1	B3gnt5		ILMN_2587873	002510246	I	135	GAAGAAGGGAGAGTTCCCTCGGCGAGCGCCTTTGTTCACTGCGGCCTGGT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + lipopolysaccharide = UDP + N-acetyl-D-glucosaminyl-lipopolysaccharide [goid 8917] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186528	ILMN_186528	SRISNF2L	scl00319451.1_9				13507687	NM_030730	Srisnf2l		ILMN_1223939	006480070	S	4947	GTTACTTAGTTTGGCCTGAGGGTGGAAGAAGACTGAGGGCGGGCATGGGG										
Mus musculus	RefSeq	ILMN_212921	ILMN_212921	BC022687	NM_145450.3	NM_145450.3		217887	142351874	NM_145450.3	BC022687	NP_663425.2	ILMN_2631663	001240576	S	1628	GTGGCTCACAGTTGGATCCATGAGTTCAGAAGTCAGAAGATAGCTGCTGA	12	+	114054169-114054218	12qF1	Mus musculus cDNA sequence BC022687 (BC022687), mRNA.				C130001I08Rik; Flj20080; AW050009	C130001I08Rik; Flj20080; AW050009
Mus musculus	RefSeq	ILMN_198060	ILMN_198060	LOC280096	XM_207109.3	XM_207109.3			38081230	XM_207109.3	LOC280096		ILMN_1254221	002810066	S	1957	GGCAAGTGGATGGATTTGGAGGGTATCATCTTGAGTGAGGTAACCTAGTC										
Mus musculus	RefSeq	ILMN_212475	ILMN_212475	F730014I05RIK	NM_146129.2	NM_146129.2		228866	31981893	NM_146129.2	F730014I05Rik	NP_666241.1	ILMN_2988678	002810347	S	2513	GGCAGCAGGACTTGAGCTGCCAGGGACATAGGAATATTACGGCTCTGCCA	2	+	164582403-164582452	2qH3	Mus musculus RIKEN cDNA F730014I05 gene (F730014I05Rik), mRNA.				2310022K11Rik; C20orf67; PCIF1; MGC25976	2310022K11Rik; C20orf67; PCIF1; MGC25976
Mus musculus	RefSeq	ILMN_198040	ILMN_198040	LOC277927	XM_204252.2	XM_204252.2			38080840	XM_204252.2	LOC277927		ILMN_1212815	005270440	S	850	GACTCCCCACGGGACCCTAAGACCTCTGAAGAATGCGAATCGATCCATAC										
Mus musculus	Riken	ILMN_205521	ILMN_205521	D130057F13RIK	ri|D130057F13|PX00184L24|AK083901|3273					AK083901	D130057F13Rik		ILMN_1230680	001780242	S	3042	GCGTGAGGTGTTTGTGTGTGCATCTCTAGAGGTCAGAGGTTGATGTTTGC										
Mus musculus	MEEBO	ILMN_190993	ILMN_190993	E030027H19RIK	scl0109332.1_8				27151745	NM_133974	E030027H19Rik		ILMN_2718834	004010326	S	2387	TTTCCTAGCTTTCACAACACCCTGGGCTCTCCCCAGCAATGCATGAACCA										
Mus musculus	RefSeq	ILMN_222794	ILMN_222794	4931406B18RIK	NM_028737.3	NM_028737.3		74054	142386082	NM_028737.3	4931406B18Rik	NP_083013.2	ILMN_2754926	005290598	S	3878	CCCTCCAGGGTCCTTCTGCCACTCACAGCAAAGTAGCACTGTGTAGAGAC	7	-	50747456-50747505	7qB4	Mus musculus RIKEN cDNA 4931406B18 gene (4931406B18Rik), mRNA.				4930538L19Rik	4930538L19Rik
Mus musculus	RefSeq	ILMN_215177	ILMN_215177	MMRN1	XM_284198.5	XM_284198.5		70945	94377400	XM_284198.5	Mmrn1	XP_284198.1	ILMN_1232435	001430747	S	3790	CCCCCTGTGACCACGTTCAGTGGTTACTTGTTATATCGCACCTAAGTTTG	6	+	60938569-60938613:60938614-60938618	6qB3	PREDICTED: Mus musculus multimerin 1 (Mmrn1), mRNA.					
Mus musculus	RefSeq	ILMN_222554	ILMN_222554	SLFN5	NM_183201.3	NM_183201.3		327978	141801697	NM_183201.3	Slfn5	NP_899024.2	ILMN_2751361	000070296	S	3882	TCCAGAGTTCATTTCCAGGGATGATTTGCAGGAGCAAATCATGAAAACTT	11	+	82776245-82776294	11qC	Mus musculus schlafen 5 (Slfn5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI956840	AI956840
Mus musculus	RefSeq	ILMN_218364	ILMN_218364	IRX1	NM_010573.2	NM_010573.2		16371	134288844	NM_010573.2	Irx1	NP_034703.2	ILMN_1218204	001010209	S	1349	TCCAACTGGACCAACGGCGCGTTCCTAGCACAGGGCTCGCTGCTGAACAT	13	-	72096846-72096895	13qC1	Mus musculus Iroquois related homeobox 1 (Drosophila) (Irx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_203174	ILMN_203174	A430107O13RIK	ri|A430107O13|PX00064B15|AK040587|3521					AK040587	A430107O13Rik		ILMN_2555288	003610097	S	3161	CGGCCTCTGCTGAAACAGGAGAAGCAAAGGAACAAGGGAAACTCTCAGTT										
Mus musculus	RefSeq	ILMN_223174	ILMN_262054	NDRG1	NM_008681.2	NM_008681.2		17988	118150657	NM_008681.2	Ndrg1	NP_032707.2	ILMN_1250195	006620187	S	2642	CCAGGATCTTGGAGTTGCTAGAGGAAAAGTAGTTATGCCCTATAGGCGGC	15	-	66761078-66761127	15qD2	Mus musculus N-myc downstream regulated gene 1 (Ndrg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IDA]		CMT4D; Ndrl; Ndr1; RTP; PROXY1; NMSL; TDD5; CAP43; HMSNL; DRG1	CMT4D; Ndrl; Ndr1; RTP; PROXY1; NMSL; TDD5; CAP43; HMSNL; DRG1
Mus musculus	RefSeq	ILMN_213355	ILMN_227275	LY6K	NM_029627.1	NM_029627.1		76486	54144476	NM_029627.1	Ly6k	NP_083903.1	ILMN_2636229	006650440	S	589	GGGAAAGCCAGTGGGAGAAGACATAGATACATTGAGCTGTTACTGACTGG	15	-	74627436-74627485	15qD3	Mus musculus lymphocyte antigen 6 complex, locus K (Ly6k), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			3110035B01Rik; 2410015A16Rik	3110035B01Rik; 2410015A16Rik
Mus musculus	RefSeq	ILMN_199596	ILMN_199596	LOC383711	XM_357200.1	XM_357200.1			38074852	XM_357200.1	LOC383711		ILMN_1213323	001940044	S	2697	GAAACAGCATTTGGAGACCCTTAGAGATGATGTGCGCTGGGAGAGCTGGC										
Mus musculus	RefSeq	ILMN_220330	ILMN_246608	EFCAB4A	NM_001025103.1	NM_001025103.1		213573	68534954	NM_001025103.1	Efcab4a	NP_001020274.1	ILMN_2720663	006020136	S	1362	CCAGAAGGCATCCCATGCCTGAAGGAGCTAACCTCAGAGTAGTCAAGGCC	7	+	148652225-148652274	7qF5	Mus musculus EF-hand calcium binding domain 4A (Efcab4a), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	BC026645; Efcab4	BC026645; Efcab4
Mus musculus	RefSeq	ILMN_246608	ILMN_246608	EFCAB4A	NM_001025103.1	NM_001025103.1		213573	68534954	NM_001025103.1	Efcab4a	NP_001020274.1	ILMN_2913222	007210487	S	1330	GTGGCGGATACTTGCTAAGTGTGTGGCTCTACCCAGAAGGCATCCCATGC	7	+	148652193-148652242	7qF5	Mus musculus EF-hand calcium binding domain 4A (Efcab4a), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	BC026645; Efcab4	BC026645; Efcab4
Mus musculus	RefSeq	ILMN_220330	ILMN_246608	EFCAB4A	NM_001025103.1	NM_001025103.1		213573	68534954	NM_001025103.1	Efcab4a	NP_001020274.1	ILMN_1238203	005900184	S	453	GGAGGAGGAGGATGTTGAGACATTCTACACTTCCTTGGAGAAGCTAGGAG	7	+	148650134-148650183	7qF5	Mus musculus EF-hand calcium binding domain 4A (Efcab4a), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	BC026645; Efcab4	BC026645; Efcab4
Mus musculus	RefSeq	ILMN_211994	ILMN_260380	LRRC36	NM_001033371.2	NM_001033371.2		270091	142361661	NM_001033371.2	Lrrc36	NP_001028543.1	ILMN_1235822	007050332	S	1925	TGTCTCAGAAGCCGACCCAGAGCCTAGTTTGTGGAGCTAGCACCGCAGCC	8	+	107987829-107987868:107987869-107987878	8qD3	Mus musculus leucine rich repeat containing 36 (Lrrc36), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC036564	BC036564
Mus musculus	MEEBO	ILMN_213074	ILMN_213074	2310066I10RIK	scl34122.7.1_24	XM_284376.2			38089050	XM_284376.2	2310066I10Rik		ILMN_2633260	006220528	S	776	GGACGAGGACTGCGTGGTAATGGCAGAAGATAAATGGAATGACAGCCGTT										
Mus musculus	RefSeq	ILMN_198274	ILMN_198274	LOC225805	XM_123311.3	XM_123311.3			38083549	XM_123311.3	LOC225805		ILMN_1250796	002600373	S	1260	CTCGGACTCAGATGAGGAGGGAGAAGAAGAGGAGAAAACCAAGGAGGAGA										
Mus musculus	MEEBO	ILMN_195018	ILMN_195018	F830001A07RIK	scl7450.1.1_143				51764944	XM_489281	F830001A07Rik		ILMN_1257326	000650026	S	13	GCACTTGTTTTTCACCCAAGCAGGCTCCAATTCAGAAGAACCTGACCCGG										
Mus musculus	RefSeq	ILMN_197602	ILMN_258820	LOC634213	XM_908876.2	XM_908876.2		634213	94397495	XM_908876.2	LOC634213	XP_913969.2	ILMN_1236585	003870176	S	271	GGGACCACGTCCTTCCACTTGCAGAAAGCCTCAGTGCAGGAGTCAGATTC					PREDICTED: Mus musculus similar to T-cell receptor alpha chain V region CTL-F3 precursor (LOC634213), mRNA.					
Mus musculus	RefSeq	ILMN_199195	ILMN_326149	OTTMUSG00000025408	NR_003564.1	NR_003564.1		217066	148539564	NR_003564.1	OTTMUSG00000025408		ILMN_1223594	004850270	S	581	CTTTTTGATGAGGACCCTGCTAATGAACCACTTTCCAATGAGGACCCCGC				11qC	Mus musculus predicted gene, OTTMUSG00000025408 (OTTMUSG00000025408), non-coding RNA.					
Mus musculus	RefSeq	ILMN_220500	ILMN_220500	OLFR96	NM_146514.1	NM_146514.1		258507	33239319	NM_146514.1	Olfr96	NP_666725.1	ILMN_2722883	001400471	S	680	TGAGAGTTCCTTCTGGGACCAGAAGAACCAAGGCCTTCTCCACATGCTCC	17	+	37362751-37362800	17qB1	Mus musculus olfactory receptor 96 (Olfr96), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISO]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISO]	MOR121-1	MOR121-1
Mus musculus	RefSeq	ILMN_216081	ILMN_233874	PFKFB1	NM_008824.2	NM_008824.2		18639	142361607	NM_008824.2	Pfkfb1	NP_032850.1	ILMN_2667132	006020731	S	1650	TAAGCCTACCTAGTTGTGGATAAAGTTCTTTTTAAATATTCTCTGATGAA	X	+	147078332-147078381	XqF3	Mus musculus 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 (Pfkfb1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 6000] [evidence IEA]; The chemical reactions and pathways involving fructose 2,6-bisphosphate. The D enantiomer is an important regulator of the glycolytic and gluconeogenic pathways. It inhibits fructose 1,6-bisphosphatase and activates phosphofructokinase [goid 6003] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 2,6-bisphosphate [goid 3873] [evidence IEA]; Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 4331] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195056	ILMN_195056	6720422M22RIK	scl099946.1_47						6720422M22Rik		ILMN_1253572	000070598	S	13	ATCATGGTTGGCCGTCTTTCTGCACGCCTAGGCCAGATCCTTCACTGGAG										
Mus musculus	RefSeq	ILMN_241597	ILMN_241597	TAS2R144	NM_001001453.1	NM_001001453.1		387515	47824892	NM_001001453.1	Tas2r144	NP_001001453.1	ILMN_3160931	006420142	S	708	CAGCATGGAGGCTCACGTGGGTGCCATCAAATCGACCAGCCACTCTCTCA	6	+	42166034-42166083	6qB2.1	Mus musculus taste receptor, type 2, member 144 (Tas2r144), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence NAS]	Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence NAS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Tas2r44; mt2r33	Tas2r44; mt2r33
Mus musculus	RefSeq	ILMN_238854	ILMN_238854	2810046L04RIK	NM_173382.1	NM_173382.1		212127	27734197	NM_173382.1	2810046L04Rik	NP_775558.2	ILMN_2798674	002070736	S	4027	GAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGTGCTGGT	3	+	53285383-53285432	3qC	Mus musculus RIKEN cDNA 2810046L04 gene (2810046L04Rik), mRNA.				9330161F11	9330161F11
Mus musculus	MEEBO	ILMN_213564	ILMN_213564	ISLR	scl0003433.1_1				6172374	AB024538	Islr		ILMN_1226665	005560400	S	6	GAGCTGTGTGCAAAGGAGAAGCTGGGGTCCACTTCCATCTTGTCTTCATC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212452	ILMN_237641	HIST2H4	NM_033596.1	NM_033596.1		97122	21361208	NM_033596.1	Hist2h4	NP_291074.1	ILMN_2626619	003450564	S	54	AAGGGTCTAGGCAAGGGTGGCGCCAAGCGCCATCGCAAAGTCTTGCGTGA	3	-	96067153-96067202	3qF2.1	Mus musculus histone cluster 2, H4 (Hist2h4), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	X04652; H4	X04652; H4
Mus musculus	MEEBO	ILMN_215174	ILMN_215174	DECR2	scl50155.9_2	NM_011933.1			6753621	NM_011933.1	Decr2		ILMN_2705848	005910349	S	340	GCTGCCACCGGAAAGCGGTGCCTCCCTCTGTCTATGGATGTCCGAGTTCC						A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: trans-2,3-didehydroacyl-CoA + NADP+ = trans,trans-2,3,4,5-tetradehydroacyl-CoA + NADPH + H+ [goid 8670] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215174	ILMN_215174	DECR2	scl50155.9_2	NM_011933.1			6753621	NM_011933.1	Decr2		ILMN_2705849	003310161	S	341	CTGCCACCGGAAAGCGGTGCCTCCCTCTGTCTATGGATGTCCGAGTTCCC						A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: trans-2,3-didehydroacyl-CoA + NADP+ = trans,trans-2,3,4,5-tetradehydroacyl-CoA + NADPH + H+ [goid 8670] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211746	ILMN_211746	LGALS1	scl47757.5.8_11	NM_008495.1			6678681	NM_008495.1	Lgals1		ILMN_2619107	007330278	S	358	CCTGACCATCAAGCTGCCAGACGGACATGAATTCAAGTTCCCCAACCGCC						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any glycoside in which the sugar moiety is galactose [goid 16936] [evidence IEA]; Interacting selectively with the aldohexose galactose (galacto-hexose), a common constituent of many oligo- and polysaccharides [goid 5534] [evidence NAS]		
Mus musculus	RefSeq	ILMN_221749	ILMN_221749	DYNC1I1	NM_010063.1	NM_010063.1		13426	6753655	NM_010063.1	Dync1i1	NP_034193.1	ILMN_2996877	000380056	S	2208	CCCAGCGTTTCTACCTTTGTGTCCCCGTCTCAAAAACAAATGGGGGAGGG	6	+	5977665-5977714	6qA1	Mus musculus dynein cytoplasmic 1 intermediate chain 1 (Dync1i1), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	Dncic1; DIC; IC74	Dncic1; DIC; IC74
Mus musculus	RefSeq	ILMN_221749	ILMN_221749	DYNC1I1	NM_010063.1	NM_010063.1		13426	6753655	NM_010063.1	Dync1i1	NP_034193.1	ILMN_2739825	003140408	S	1853	GGGTGGCAAGGAAGTTGCGGTAGGGGACTCAGAAGGCCGCATTTGGATCT	6	+	5960519-5960568	6qA1	Mus musculus dynein cytoplasmic 1 intermediate chain 1 (Dync1i1), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	Dncic1; DIC; IC74	Dncic1; DIC; IC74
Mus musculus	RefSeq	ILMN_217077	ILMN_217077	MRPL36	NM_053163.1	NM_053163.1		94066	16716450	NM_053163.1	Mrpl36	NP_444393.1	ILMN_2797212	006060014	S	721	GTAAGTGCTTTAAGAGGCTGCCTGAGCCAAAAAGCTCTTGTGGGGTGTGC	13	+	73469445-73469494	13qC1	Mus musculus mitochondrial ribosomal protein L36 (Mrpl36), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	AI646041	AI646041
Mus musculus	RefSeq	ILMN_215961	ILMN_215961	GSTT3	NM_133994.3	NM_133994.3		103140	133892397	NM_133994.3	Gstt3	NP_598755.1	ILMN_2665715	002350324	S	1790	CCGGCTCCAAACTGTCAAGCTACTTAATCTTGTGCCATAAGACGTCTTTT	10	-	75237468-75237517	10qC1	Mus musculus glutathione S-transferase, theta 3 (Gstt3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IDA]	AI118089	AI118089
Mus musculus	RefSeq	ILMN_198478	ILMN_314385	GM336	XM_001474633.1	XM_001474633.1		240539	149270603	XM_001474633.1	Gm336	XP_001474683.1	ILMN_1230605	002360228	S	1253	CAGCAGCCAAGGAGAAATGTGGATGGCTGGACAAACTCTCTCCTCAAGGG				19qA	PREDICTED: Mus musculus gene model 336, (NCBI) (Gm336), mRNA.					
Mus musculus	RefSeq	ILMN_211263	ILMN_211263	TGIF1	NM_009372.2	NM_009372.2		21815	31982824	NM_009372.2	Tgif1	NP_033398.2	ILMN_2767113	007050228	S	217	GGAGCACTAGTATAGGAGGAGGATCATCGACTACCCTCCCGCCACTCCAC	17	-	71200272-71200321	17qE1.3	Mus musculus TGFB-induced factor homeobox 1 (Tgif1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of retinoic acid receptor signaling pathway activity [goid 48387] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family [goid 8432] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AA959811; AI462167; Tgif	AA959811; AI462167; Tgif
Mus musculus	RefSeq	ILMN_211263	ILMN_211263	TGIF1	NM_009372.2	NM_009372.2		21815	31982824	NM_009372.2	Tgif1	NP_033398.2	ILMN_1253854	004850682	S	1350	TTCGAATGTTTCTTGGTAGTTTCTCATAATGTGAGACGGTTCCCAGTATC	17	-	71193767-71193816	17qE1.3	Mus musculus TGFB-induced factor homeobox 1 (Tgif1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of retinoic acid receptor signaling pathway activity [goid 48387] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family [goid 8432] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AA959811; AI462167; Tgif	AA959811; AI462167; Tgif
Mus musculus	RefSeq	ILMN_211263	ILMN_211263	TGIF1	NM_009372.2	NM_009372.2		21815	31982824	NM_009372.2	Tgif1	NP_033398.2	ILMN_1212717	001090100	S	85	CCCGGCTGGCTGCCAGAAGATCCCGACTGGAGGAAGCCCAAGTGTCACTT	17	-	71200404-71200453	17qE1.3	Mus musculus TGFB-induced factor homeobox 1 (Tgif1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of retinoic acid receptor signaling pathway activity [goid 48387] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family [goid 8432] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AA959811; AI462167; Tgif	AA959811; AI462167; Tgif
Mus musculus	RefSeq	ILMN_197719	ILMN_197719	LOC329702	XM_283860.2	XM_283860.2			38077574	XM_283860.2	LOC329702		ILMN_2529128	007320707	S	1992	CCAGGACAGAAAGCAGTGACTTCAGAGGAAGCGTCCACAGCATCTCCCAG										
Mus musculus	RefSeq	ILMN_215438	ILMN_215438	PHF11	NM_172603.1	NM_172603.1		219131	27369857	NM_172603.1	Phf11	NP_766191.1	ILMN_2696491	006660327	S	1276	ACCCTGGGTTTATGCTCACTATCATACCAGATTGCCAATATTTAGCACAC	14	-	58231045-58231094	14qC3	Mus musculus PHD finger protein 11 (Phf11), mRNA.				4933417L10Rik	4933417L10Rik
Mus musculus	RefSeq	ILMN_218389	ILMN_229617	C330007P06RIK	XM_895890.2	XM_895890.2		77644	94407281	XM_895890.2	C330007P06Rik	XP_900983.1	ILMN_1258683	004260537	S	3656	GTTGGAGTATGGATGATCAGGGACTACTAAATACAACAGAAACACCAGTC	X	-	33271270-33271319	XqA3.3	PREDICTED: Mus musculus RIKEN cDNA C330007P06 gene, transcript variant 3 (C330007P06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_252972	ILMN_252972	EG432436	NM_001004162.1	NM_001004162.1		432436	51921324	NM_001004162.1	EG432436	NP_001004162.1	ILMN_2957044	001090368	S	2009	CCTCATAAGGTGTGAAGTGTATCCTTAGCCCCCAAGACCCATGTCCTTAC	10	+	21413587-21413636	10qA3	Mus musculus predicted gene, EG432436 (EG432436), mRNA.					
Mus musculus	Riken	ILMN_202651	ILMN_202651	INVS	ri|9030617G22|PX00061A05|AK020257|1223					AK020257	Invs		ILMN_1220365	000510068	S	840	TGCTAGGAGAACACTGACTTCCAGGCAGCTAGGATGGGGGTCTTAAAGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]		
Mus musculus	Riken	ILMN_204250	ILMN_204250	A830086L01RIK	ri|A830086L01|PX00156H19|AK080678|695					AK080678	A830086L01Rik		ILMN_1230534	003400315	S	82	GTCAGACATGGGGACATATGGCTCTGATTGTAGCCCTCAGGTGGAAGAGG										
Mus musculus	RefSeq	ILMN_209965	ILMN_209965	EFHB	NM_172497.2	NM_172497.2		211482	142363913	NM_172497.2	Efhb	NP_766085.1	ILMN_1247598	004120608	S	1521	GGAAAGAGGAGCGAAAATTGTATCCAAAAGAGTTGATGACTTCAAAGAGA	17	-	53566268-53566317	17qC	Mus musculus EF hand domain family, member B (Efhb), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	4921525D22Rik	4921525D22Rik
Mus musculus	RefSeq	ILMN_209965	ILMN_209965	EFHB	NM_172497.2	NM_172497.2		211482	142363913	NM_172497.2	Efhb	NP_766085.1	ILMN_1232520	006100609	S	1977	CCTTAACTGGAAAGACAGAATACCTCTCAAAGAGCATGAGAAGAGGGTCG	17	-	53552796-53552845	17qC	Mus musculus EF hand domain family, member B (Efhb), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	4921525D22Rik	4921525D22Rik
Mus musculus	RefSeq	ILMN_208804	ILMN_254233	TDPOZ1	NM_148949.1	NM_148949.1		207213	24233505	NM_148949.1	Tdpoz1	NP_683751.1	ILMN_2745344	003130687	S	1777	GGATCTGAAGCCCTCTTCTGGTCTCCATAGCCAAAAACAGTTCCGTAGAC	3	-	93473715-93473764	3qF2.1	Mus musculus TD and POZ domain containing 1 (Tdpoz1), mRNA.				MAPP2; MGC159007; Spopl1; MGC159005; 2cpoz56	MAPP2; MGC159007; Spopl1; MGC159005; 2cpoz56
Mus musculus	RefSeq	ILMN_208804	ILMN_254233	TDPOZ1	NM_148949.1	NM_148949.1		207213	24233505	NM_148949.1	Tdpoz1	NP_683751.1	ILMN_1247925	004280370	S	810	GGAGAGTCTAAAGACCCCCATTAAGATTCATAACCTGAATCCCCAAGTCT	3	-	93474682-93474731	3qF2.1	Mus musculus TD and POZ domain containing 1 (Tdpoz1), mRNA.				MAPP2; MGC159007; Spopl1; MGC159005; 2cpoz56	MAPP2; MGC159007; Spopl1; MGC159005; 2cpoz56
Mus musculus	RefSeq	ILMN_209997	ILMN_209997	KLHL23	NM_177784.2	NM_177784.2		277396	31343036	NM_177784.2	Klhl23	NP_808452.1	ILMN_2862875	002140609	S	4212	GGTCCAGGCCCTCGTCTTGACTTCAGTACTCTCAGTATCCGGTCACTTCA	2	+	69637188-69637237	2qC2	Mus musculus kelch-like 23 (Drosophila) (Klhl23), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C130068N17Rik	C130068N17Rik
Mus musculus	Riken	ILMN_207364	ILMN_207364	NIN	ri|C130097F01|PX00666H16|AK082035|2490					AK082035	Nin		ILMN_1246111	006520332	S	2249	AGTCCTGAGTCCCAGTCTGACCCTGAGTCTTGTCAGCGTGTGGGCGGACC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_194554	ILMN_258434	HS6ST2	NM_015819.3	NM_015819.3		50786	116284405	NM_015819.3	Hs6st2	NP_056634.3	ILMN_2507473	003710167	S	3103	CCAAGTGCATGACCTGGTTTCATCTGTAATAATATGGCCACAAGTTTGGC	X	-	48740974-48741023	XqA5	Mus musculus heparan sulfate 6-O-sulfotransferase 2 (Hs6st2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	6OST2	6OST2
Mus musculus	RefSeq	ILMN_192437	ILMN_258434	HS6ST2	NM_015819.3	NM_015819.3		50786	116284405	NM_015819.3	Hs6st2	NP_056634.3	ILMN_2488062	005900598	S	2800	GCAGCGAAGCTAAGTGTCAGGGACGTGCAAGTAGAGGAGAATAGTTTGAT	X	-	48741277-48741326	XqA5	Mus musculus heparan sulfate 6-O-sulfotransferase 2 (Hs6st2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	6OST2	6OST2
Mus musculus	RefSeq	ILMN_210225	ILMN_210225	IGFBP4	NM_010517.3	NM_010517.3		16010	118130042	NM_010517.3	Igfbp4	NP_034647.1	ILMN_1258988	003400747	S	1921	CCCTACCCTTATACCTCCTATCCCGCCATCTCTACCCCCCTGGGCATTTT	11	+	98913812-98913861	11qD	Mus musculus insulin-like growth factor binding protein 4 (Igfbp4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	Deb2; IGFBP-4; AI875747	Deb2; IGFBP-4; AI875747
Mus musculus	RefSeq	Ubc	ILMN_319230	LOC100048105	XM_001479832.1	XM_001479832.1		100048105	149254468	XM_001479832.1	LOC100048105	XP_001479882.1	ILMN_2588050	005960379	S	2005	GACAGACGTACCTTCCTCACCACAGTATCTAAAAAGAGCCCTCCTTGTGC					PREDICTED: Mus musculus similar to Ubc protein, transcript variant 1 (LOC100048105), mRNA.					
Mus musculus	RefSeq	Ubc	ILMN_319230	LOC100048105	XM_001479832.1	XM_001479832.1		100048105	149254468	XM_001479832.1	LOC100048105	XP_001479882.1	ILMN_1377918	002260521	S	1962	GGACGTCGAGCCCAGTGTTACCACCAAGAAGGTCAAACAGGAAGACAGAC					PREDICTED: Mus musculus similar to Ubc protein, transcript variant 1 (LOC100048105), mRNA.					
Mus musculus	RefSeq	ILMN_185477	ILMN_319230	LOC100048105	XM_001479832.1	XM_001479832.1		100048105	149254468	XM_001479832.1	LOC100048105	XP_001479882.1	ILMN_1220172	007650156	S	2015	CCTTCCTCACCACAGTATCTAAAAAGAGCCCTCCTTGTGCTTGTTCTTGG					PREDICTED: Mus musculus similar to Ubc protein, transcript variant 1 (LOC100048105), mRNA.					
Mus musculus	RefSeq	ILMN_234681	ILMN_234681	MGC117608	NM_001039041.1	NM_001039041.1		625347	84781697	NM_001039041.1	MGC117608	NP_001034130.1	ILMN_2999032	004120646	S	368	GCAGTCCAGAGTCCATCCGTCCTCACAGAAGTAGCACATGATACCAGTGA	6	-	12050081-12050130	6qA1	Mus musculus similar to mitochondrial ribosomal protein L32 (MGC117608), mRNA.					
Mus musculus	RefSeq	ILMN_236627	ILMN_236627	TCEAL3	NM_001029978.1	NM_001029978.1		594844	71533183	NM_001029978.1	Tceal3	NP_001025149.1	ILMN_3162895	004490403	I	31	CTAAGCAGCAGGACGAGCTGTGAGTGGGCTTCTGCAAGCCGGAGAAGGCA	X	+	133201022-133201071	XqF1	Mus musculus transcription elongation factor A (SII)-like 3 (Tceal3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	1100001D19Rik	1100001D19Rik
Mus musculus	RefSeq	ILMN_206572	ILMN_261762	CEACAM1	NM_001039185.1	NM_001039185.1		26365	85719298	NM_001039185.1	Ceacam1	NP_001034274.1	ILMN_1213074	005220600	S	990	CCTGCTTCGTCAATAACTCTGTCACTGGCCTCAGTAGGACCACAGTCAAG	7	-	26258832-26258881	7qA3	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 1 (Ceacam1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mmCGM2; Bgp; CD66a; Bgp1; Cea1; mmCGM1; mCEA1; Cea-7; bb-1; MHVR; mmCGM1a; C-CAM; Hv2; Mhv-1; Cea-1; Hv-2; Cea7	mmCGM2; Bgp; CD66a; Bgp1; Cea1; mmCGM1; mCEA1; Cea-7; bb-1; MHVR; mmCGM1a; C-CAM; Hv2; Mhv-1; Cea-1; Hv-2; Cea7
Mus musculus	RefSeq	ILMN_217470	ILMN_261762	CEACAM1	NM_001039185.1	NM_001039185.1		26365	85719298	NM_001039185.1	Ceacam1	NP_001034274.1	ILMN_2683560	000990364	S	1374	GCATCGTGATTGGAGTTGTGGCTGGGGTGGCTCTAATAGCAGGGCTGGCA	7	-	26251364-26251413	7qA3	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 1 (Ceacam1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mmCGM2; Bgp; CD66a; Bgp1; Cea1; mmCGM1; mCEA1; Cea-7; bb-1; MHVR; mmCGM1a; C-CAM; Hv2; Mhv-1; Cea-1; Hv-2; Cea7	mmCGM2; Bgp; CD66a; Bgp1; Cea1; mmCGM1; mCEA1; Cea-7; bb-1; MHVR; mmCGM1a; C-CAM; Hv2; Mhv-1; Cea-1; Hv-2; Cea7
Mus musculus	MEEBO	ILMN_195903	ILMN_195903	2510003D18RIK	scl21373.2.1_217						2510003D18Rik		ILMN_1243183	000610593	S	20	CACATCACACCACATGGGCAAAGCACTTAGTCGCTGCAGCTGTGTGTCGC										
Mus musculus	RefSeq	ILMN_216950	ILMN_216950	GRPEL1	NM_024478.2	NM_024478.2		17713	31542920	NM_024478.2	Grpel1	NP_077798.1	ILMN_2945806	007380273	S	668	CTCCCTCAGGCTCTGGACTTTGTAGGTCACTTGCTAGAACTCGAAGGGCG	5	+	36814056-36814105	5qB3	Mus musculus GrpE-like 1, mitochondrial (Grpel1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins [goid 774] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	mt-Grpel1; MGC8152; mt-GrpE#1; AA408748	mt-Grpel1; MGC8152; mt-GrpE#1; AA408748
Mus musculus	RefSeq	ILMN_216950	ILMN_216950	GRPEL1	NM_024478.2	NM_024478.2		17713	31542920	NM_024478.2	Grpel1	NP_077798.1	ILMN_2677357	006280402	S	2752	GGCCCTGCTCCATGGAAATCATCTTTGGCACTTTGAGGATCAGACTCACC	5	+	36816140-36816189	5qB3	Mus musculus GrpE-like 1, mitochondrial (Grpel1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins [goid 774] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	mt-Grpel1; MGC8152; mt-GrpE#1; AA408748	mt-Grpel1; MGC8152; mt-GrpE#1; AA408748
Mus musculus	RefSeq	ILMN_214689	ILMN_214689	ZFP770	NM_175466.2	NM_175466.2		228491	31341976	NM_175466.2	Zfp770	NP_780675.1	ILMN_1217060	003120603	S	3899	TCCCCCCTAGACAGGGAAAGTTCTGAATGTTGTGCTTGTATGACCATGAG	2	-	113885216-113885265	2qE4	Mus musculus zinc finger protein 770 (Zfp770), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	6430601A21Rik	6430601A21Rik
Mus musculus	RefSeq	ILMN_220365	ILMN_220365	CRMP1	NM_007765.3	NM_007765.3		12933	40068506	NM_007765.3	Crmp1	NP_031791.3	ILMN_2781663	005890739	S	2642	TTGGGCTTTGGGCCCAGCCAGGCTCACACCCAGAAAGGGGTGTCCTGACA	5	+	37683104-37683153	5qB3	Mus musculus collapsin response mediator protein 1 (Crmp1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DRP-1; Dpysl1; Ulip3	DRP-1; Dpysl1; Ulip3
Mus musculus	RefSeq	ILMN_220365	ILMN_220365	CRMP1	NM_007765.3	NM_007765.3		12933	40068506	NM_007765.3	Crmp1	NP_031791.3	ILMN_1244675	003830129	S	2329	GCATGTTAGTAAGTTACGTATGCAAGTCTGAGCGCGCGCGGCTGATGGAC	5	+	37682791-37682840	5qB3	Mus musculus collapsin response mediator protein 1 (Crmp1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DRP-1; Dpysl1; Ulip3	DRP-1; Dpysl1; Ulip3
Mus musculus	RefSeq	ILMN_218013	ILMN_218013	JAKMIP1	NM_178394.3	NM_178394.3		76071	141801680	NM_178394.3	Jakmip1	NP_848481.1	ILMN_2690460	004210706	S	2196	CGGGATAACTTCACTGCCTTAACGTGTCCTGGGGAGGATGCTTGCGACGT	5	+	37516410-37516459	5qB3	Mus musculus janus kinase and microtubule interacting protein 1 (Jakmip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence ISA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]; Interacting selectively with the gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor [goid 50811] [evidence ISA]	Gababrbp; C330021K24Rik; Marlin-1; 5830437M04Rik	Gababrbp; C330021K24Rik; Marlin-1; 5830437M04Rik
Mus musculus	RefSeq	ILMN_214084	ILMN_214084	OLFR640	NM_146822.1	NM_146822.1		258819	22129216	NM_146822.1	Olfr640	NP_667033.1	ILMN_2644084	001050309	S	679	GTGTTGGTTATTGCATCACACGAACAGCGACTCAAGGCACTCAACACCTG	7	-	111170102-111170151	7qE3	Mus musculus olfactory receptor 640 (Olfr640), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC123668; MOR13-4	MGC123668; MOR13-4
Mus musculus	RefSeq	ILMN_220501	ILMN_233643	LOC637227	XM_912852.2	XM_912852.2		637227	94377657	XM_912852.2	LOC637227	XP_917945.2	ILMN_2722893	002190021	S	89	TGCTGTGGTTGTCTGGTGTTGAAGGAGACATTGTGATGACCCAGTCTCAC				6qC1	PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC637227), mRNA.					
Mus musculus	RefSeq	ILMN_199496	ILMN_199496	LOC383576	XM_357131.1	XM_357131.1			38073510	XM_357131.1	LOC383576		ILMN_2535430	002350121	S	246	AGTGCAGGGAACAGAAGTCAAGAGAAAGACTACGGAGCAGCAGGTGAGGC										
Mus musculus	RefSeq	ILMN_219523	ILMN_219523	ORF9	NM_020622.2	NM_020622.2		52793	142383579	NM_020622.2	ORF9	NP_065647.1	ILMN_2763194	004810259	S	329	GCTCAGTGGTGGTGGCCGCGACAAGTATGCCAAGATCTGCTTTGAGGATG	16	-	97703397-97703446	16qC4	Mus musculus open reading frame 9 (ORF9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence ISA]	The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence NAS]	2-21; 9030624C24Rik; D16Jhu19e; FAM3B	2-21; 9030624C24Rik; D16Jhu19e; FAM3B
Mus musculus	RefSeq	ILMN_219523	ILMN_219523	ORF9	NM_020622.2	NM_020622.2		52793	142383579	NM_020622.2	ORF9	NP_065647.1	ILMN_2709997	001070192	S	189	ATTCCTGACGTGCCCCTGTCCAGCACTCTCTACAACATCCGAAGCATTGG	16	-	97722486-97722535	16qC4	Mus musculus open reading frame 9 (ORF9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence ISA]	The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence NAS]	2-21; 9030624C24Rik; D16Jhu19e; FAM3B	2-21; 9030624C24Rik; D16Jhu19e; FAM3B
Mus musculus	RefSeq	ILMN_197906	ILMN_230898	LOC670731	XM_982997.1	XM_982997.1		670731	94376026	XM_982997.1	LOC670731	XP_988091.1	ILMN_1245871	005490112	S	373	ATGTCCGTCACACAGAAGCAGGAGAGCGAGAAAGTACAGATTGCTCTGGC					PREDICTED: Mus musculus similar to spermatogenesis associated glutamate (E)-rich protein 3 (LOC670731), mRNA.					
Mus musculus	RefSeq	ILMN_253049	ILMN_253049	SPACA4	NM_027055.1	NM_027055.1		69363	21312277	NM_027055.1	Spaca4	NP_081331.1	ILMN_2966218	006520291	S	353	TGTGGGGATGACGAAGATTGCTTCACAGGCCACGGAGTAGCCCAGGGTGT	7	-	45593447-45593496	7qB4	Mus musculus sperm acrosome associated 4 (Spaca4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Samp14; AV043694; 1700008E09Rik	Samp14; AV043694; 1700008E09Rik
Mus musculus	RefSeq	ILMN_211293	ILMN_211293	EIF4E3	NM_025829.4	NM_025829.4		66892	146134995	NM_025829.4	Eif4e3	NP_080105.1	ILMN_2643291	000130056	S	514	CTCACTAGTGGGCGAAGCGACTGTGCTAGAGAAGATCCACCAGCTCCTGC				6qD3	Mus musculus eukaryotic translation initiation factor 4E member 3 (Eif4e3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	1300018P11Rik; eIF4E-3; AI451927	1300018P11Rik; eIF4E-3; AI451927
Mus musculus	RefSeq	ILMN_211293	ILMN_211293	EIF4E3	NM_025829.4	NM_025829.4		66892	146134995	NM_025829.4	Eif4e3	NP_080105.1	ILMN_1254878	004810041	S	2177	CGGTTTCACTCATGAGGGGCTCGGATCCTTCTTGTCTCAATGACGTGCAT				6qD3	Mus musculus eukaryotic translation initiation factor 4E member 3 (Eif4e3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	1300018P11Rik; eIF4E-3; AI451927	1300018P11Rik; eIF4E-3; AI451927
Mus musculus	Riken	ILMN_206221	ILMN_206221	C130084G10RIK	ri|C130084G10|PX00172K13|AK081880|2127					AK081880	C130084G10Rik		ILMN_1243404	000430725	S	1713	ACAGGAAGGGAGAGGAAGGCGAGCTGTCAGAGTCCTAGTGTCCCCTCAAG										
Mus musculus	RefSeq	ILMN_245990	ILMN_245990	FFAR3	NM_001033316.1	NM_001033316.1		233080	85701811	NM_001033316.1	Ffar3	NP_001028488.1	ILMN_2869075	000110682	S	1347	CTGGGTGGAAGAGGAAGGGATTACCCAGGGCTGGAACTGAGCTGGGAACT	7	-	30563318-30563367	7qB1	Mus musculus free fatty acid receptor 3 (Ffar3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gm478; Gpr41	Gm478; Gpr41
Mus musculus	RefSeq	ILMN_256952	ILMN_256952	B020006M18RIK	NM_001033793.1	NM_001033793.1		546118	85702116	NM_001033793.1	B020006M18Rik	NP_001028965.1	ILMN_2859758	002570551	S	1702	AGAAGGGAGTTTGCCATAGCACTGCCTGCATCCGGTTCCTGGGCTTAGGA	9	+	18160967-18161016	9qA2	Mus musculus RIKEN cDNA B020006M18 gene (B020006M18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212316	ILMN_212316	CACNG3	NM_019430.1	NM_019430.1		54376	9506452	NM_019430.1	Cacng3	NP_062303.1	ILMN_2843891	002850066	S	487	GACCCTGGGCAGAGGGACTCTAAAAAGAGCTACTCCTACGGCTGGTCCTT	7	+	129911899-129911948	7qF3	Mus musculus calcium channel, voltage-dependent, gamma subunit 3 (Cacng3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212316	ILMN_212316	CACNG3	NM_019430.1	NM_019430.1		54376	9506452	NM_019430.1	Cacng3	NP_062303.1	ILMN_1248692	006980228	S	13	GACAGAGGTATCCAGATGTTGATCACTACTGTAGGAGCCTTCGCAGCTTT	7	+	129815300-129815349	7qF3	Mus musculus calcium channel, voltage-dependent, gamma subunit 3 (Cacng3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223523	ILMN_255846	4930548F15RIK	XM_984432.1	XM_984432.1		75300	94394769	XM_984432.1	4930548F15Rik	XP_989526.1	ILMN_1214624	000060088	S	1053	GTCTGTCCTGTCTATCGGGAGGAAAGCTTCTTCTTATGTTTGCAGGTTTG	13	+	31904083-31904132	13qA3.2	PREDICTED: Mus musculus RIKEN cDNA 4930548F15 gene (4930548F15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222411	ILMN_236749	SPRR2J	NR_003185.1	NR_003185.1		20764	114688037	NR_003185.1	Sprr2j		ILMN_2749198	000520291	S	388	TTACATAAGTCCATAGCAACACCTCCATCTTCCATTTAAACCTGTAATGG	3	+	92223033-92223082	3qF1	Mus musculus small proline-rich protein 2J (Sprr2j), non-coding RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222277	ILMN_222277	BPHL	NM_026512.1	NM_026512.1		68021	21624608	NM_026512.1	Bphl	NP_080788.1	ILMN_2747284	000270767	S	1122	TTTCCATTTTTAACATTAACTCTCTATCATCGTCTATGAGTAAGTTCTTA	13	+	34165856-34165905	13qA3.3	Mus musculus biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen) (Bphl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	5730533B08Rik; 2010012D11Rik; AI115341	5730533B08Rik; 2010012D11Rik; AI115341
Mus musculus	Riken	ILMN_204598	ILMN_204598	1300006C19RIK	ri|1300006C19|R000011G13|AK018758|2709					AK018758	1300006C19Rik		ILMN_1234329	005890358	S	1412	GTGCTGTGTACTTTGCCGGAGTGATGGTGCGGCTGATGCTGACTCTGACC										
Mus musculus	RefSeq	ILMN_197895	ILMN_197895	LOC270344	XM_195403.1	XM_195403.1			25046205	XM_195403.1	LOC270344		ILMN_2529741	006480021	S	274	CTCCCCGAAGCGTTGGAAGCCATGAAGAGGCTCAAGCTCTCTTCTGGGTA										
Mus musculus	Riken	ILMN_206814	ILMN_206814	D930014A20RIK	ri|D930014A20|PX00201I12|AK086217|4265					AK086217	D930014A20Rik		ILMN_1237446	001230273	S	3929	TGCAGGCAGATGTGCAGCCTATGTTCTGCTCCTGCCCGAAATTAAGTGGC										
Mus musculus	RefSeq	ILMN_223641	ILMN_223641	OLFR1100	NM_146594.1	NM_146594.1		258587	22129462	NM_146594.1	Olfr1100	NP_666805.1	ILMN_1242841	006280438	S	777	CTTGAAACCAAGTAATTCCTACTACTCAGGAAAGGAACAAGTGGCTTCTG	2	-	86818125-86818174	2qD	Mus musculus olfactory receptor 1100 (Olfr1100), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR206-4	MOR206-4
Mus musculus	Riken	ILMN_207380	ILMN_207380	MLLT2H	ri|C330048K17|PX00667P11|AK082878|1568					AK082878	Mllt2h		ILMN_2587166	000290138	S	1477	CCGATTTGGCAATGATACACTCAAAACAAAACTCAGAGCCACTCTGTAGG										
Mus musculus	Riken	ILMN_205827	ILMN_205827	PARN	ri|A530068O20|PX00142A01|AK041044|2521					AK041044	Parn		ILMN_1241997	003780646	S	2251	CAGCATGATGGTATGCGTGTTTCTGCCTGTGTGGCTAGAGCAGGAGGCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP [goid 4535] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193616	ILMN_193616	2310075M15RIK	scl43319.25_22				51828970	XM_283052	2310075M15Rik		ILMN_2498851	006560707	S	3	GTCCATTACCAAAGAGGTGTTTGCACTTTGTAATGATACCTTTCAGTTCA										
Mus musculus	MEEBO	ILMN_193616	ILMN_193616	2310075M15RIK	scl43319.25_22				51828970	XM_283052	2310075M15Rik		ILMN_2523972	005270014	S	2183	GGGCCTCCTCTAGAATACTGTTGAACCTGGGAACTCAGAAAGGGGTCAGT										
Mus musculus	Riken	ILMN_202903	ILMN_202903	NAB1	ri|6430706K11|PX00048H23|AK032615|2773					AK032615	Nab1		ILMN_1257313	007320554	S	2539	CACCCTGGTGATACACGTGGTATGGCTGCTACACGGAGCTTTAGTTAGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]; Any process that modulates the frequency, rate or extent of epidermis development [goid 45682] [evidence IGI]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]		
Mus musculus	RefSeq	ILMN_194453	ILMN_247159	EDA2R	NM_175540.4	NM_175540.4		245527	142353600	NM_175540.4	Eda2r	NP_780749.2	ILMN_2637295	004730431	S	2250	ATTCTGGGTCAAAGAGGTAAAGATGGACTAAAGCTGTGGGTGCTGTACTT	X	-	94531587-94531636	XqC3	Mus musculus ectodysplasin A2 isoform receptor (Eda2r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Cell death resulting from activation of endogenous cellular processes [goid 12501] [evidence RCA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Xedar; 9430060M22Rik; MGC124099; TNFRSF27	Xedar; 9430060M22Rik; MGC124099; TNFRSF27
Mus musculus	RefSeq	ILMN_220418	ILMN_220418	METTL11A	NM_170592.2	NM_170592.2		66617	118130053	NM_170592.2	Mettl11a	NP_733480.1	ILMN_1258657	004390520	S	625	CCAATGGCATCATCGTCATCAAGGACAACATGGCCCAGGAGGGTGTGATC	2	+	30677942-30677991	2qB	Mus musculus methyltransferase like 11A (Mettl11a), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	RP23-221O14.3; AL033332; AL033331; MGC25577	RP23-221O14.3; AL033332; AL033331; MGC25577
Mus musculus	RefSeq	ILMN_212486	ILMN_227326	RTEL1	NM_001001882.2	NM_001001882.2		269400	50233925	NM_001001882.2	Rtel1	NP_001001882.2	ILMN_1218431	005870563	S	549	CATCTATGCTTCTAGAACGCACTCCCAGCTAACTCAGGTCATCCGTGAGC	2	+	181057531-181057580	2qH4	Mus musculus regulator of telomere elongation helicase 1 (Rtel1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	AW540478; Rtel; AI451565	AW540478; Rtel; AI451565
Mus musculus	RefSeq	ILMN_212486	ILMN_227326	RTEL1	NM_001001882.2	NM_001001882.2		269400	50233925	NM_001001882.2	Rtel1	NP_001001882.2	ILMN_2641946	000450333	S	4143	TGGTGCTGTTAACAGGAAGCAGAGCATTACACAGGTCATCTGGCCGAAGC	2	+	181091086-181091135	2qH4	Mus musculus regulator of telomere elongation helicase 1 (Rtel1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	AW540478; Rtel; AI451565	AW540478; Rtel; AI451565
Mus musculus	RefSeq	ILMN_212486	ILMN_227326	RTEL1	NM_001001882.2	NM_001001882.2		269400	50233925	NM_001001882.2	Rtel1	NP_001001882.2	ILMN_1255596	003870706	S	3917	CAGAATTTGTATGCCCGGCCTGTGCAACTGAGGATACAGTGCTTTTCCAG	2	+	181090860-181090909	2qH4	Mus musculus regulator of telomere elongation helicase 1 (Rtel1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	AW540478; Rtel; AI451565	AW540478; Rtel; AI451565
Mus musculus	MEEBO	ILMN_184146	ILMN_184146	4930415G15RIK	scl23229.9.1_214				21735462	NM_028667	4930415G15Rik		ILMN_2690348	005860162	S	43	TCTAGAACGCAGGAGCAACTGGGCAGAGCCTAAGAGGGAGCTCACTGCTC										
Mus musculus	RefSeq	ILMN_209397	ILMN_209397	C630035N08RIK	NM_175427.2	NM_175427.2		109349	31341874	NM_175427.2	C630035N08Rik	NP_780636.1	ILMN_2963343	007160341	S	1089	TAAGGCTGTGTTGGGGCCCAGGGGCCAGGTCCTATTTCCAGGAAGTGAGA	2	-	26934192-26934241	2qA3	Mus musculus RIKEN cDNA C630035N08 gene (C630035N08Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_221956	ILMN_221956	NFIX	NM_010906.2	NM_010906.2		18032	126517470	NM_010906.2	Nfix	NP_035036.1	ILMN_2742599	000270026	S	1381	GCAGGACTCGCTGAAGGAGTTTGTGCAGTTTGTGTGCTCTGACGGCTCGG	8	-	87245558-87245607	8qC3	Mus musculus nuclear factor I/X (Nfix), transcript variant 2, mRNA. XM_921228 XM_921240 XM_921250 XM_921261 XM_921270 XM_921288 XM_921293 XM_921299 XM_921300 XM_921307	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	MEEBO	ILMN_190369	ILMN_190369	5730414N17RIK	scl10578.1.1_86						5730414N17Rik		ILMN_1242145	003890341	S	7	GCACCTCCCCACTGCATGTACTCAAAAATGAAAACACTCCTACTAGAAGG										
Mus musculus	RefSeq	ILMN_191479	ILMN_251328	ZFP251	NM_001007568.2	NM_001007568.2		71591	118131107	NM_001007568.2	Zfp251	NP_001007569.1	ILMN_2524263	007650561	S	2259	GGTTCACATGGGCGAGAACCCACAGGAATTTGAGTGTGGCCCCGATTTTG	15	-	76683766-76683815	15qD3	Mus musculus zinc finger protein 251 (Zfp251), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	9130001M19Rik; MGC69913; AV339307	9130001M19Rik; MGC69913; AV339307
Mus musculus	RefSeq	ILMN_251328	ILMN_251328	ZFP251	NM_001007568.2	NM_001007568.2		71591	118131107	NM_001007568.2	Zfp251	NP_001007569.1	ILMN_2870623	000060059	S	3315	CCATTCTCCTCTGCCAACACAGCATGACTCCCAGGTATCCTCATTACCAG	15	-	76682710-76682759	15qD3	Mus musculus zinc finger protein 251 (Zfp251), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	9130001M19Rik; MGC69913; AV339307	9130001M19Rik; MGC69913; AV339307
Mus musculus	RefSeq	ILMN_213671	ILMN_213671	PTGES2	NM_133783.1	NM_133783.1		96979	19526841	NM_133783.1	Ptges2	NP_598544.1	ILMN_2639527	000780133	S	1326	TGTTCTGTGGGTAAAGGGTCTGGGGTCTCAAAGGCCTACCCTTCAACCCC	2	+	32258002-32258051	2qB	Mus musculus prostaglandin E synthase 2 (Ptges2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; The regulated release of a substance by a cell, a group of cells, or a tissue [goid 46903] [evidence IDA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprosta-5,13-dienoate [goid 50220] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	C79137; GBF-1; PGE2; GBF1; MGC6845; 0610038H10Rik	C79137; GBF-1; PGE2; GBF1; MGC6845; 0610038H10Rik
Mus musculus	RefSeq	ILMN_199788	ILMN_199788	LOC386535	XM_359379.1	XM_359379.1			38077340	XM_359379.1	LOC386535		ILMN_1236048	005490594	S	1	ATGATTACTGTGTGTTTCATTCCTTTCAACTTTAGTTCTCCATTTAAAAG										
Mus musculus	RefSeq	ILMN_200366	ILMN_200366	LOC386330	XM_359173.1	XM_359173.1			38081436	XM_359173.1	LOC386330		ILMN_1232093	004780753	S	892	TGCCAGCCCAGGCTACTATACCCGGCCAACCTCTCAATTATCATAGATGG										
Mus musculus	RefSeq	ILMN_210049	ILMN_210049	A530088H08RIK	NM_178656.3	NM_178656.3		193003	142369672	NM_178656.3	A530088H08Rik	NP_848771.1	ILMN_2601705	001070672	S	2302	GTTAGAATCCACCACCTTTGTTCCTGTTGCATTGTGGGACATTCCTCGGA	11	+	66741490-66741539	11qB3	Mus musculus RIKEN cDNA A530088H08 gene (A530088H08Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_197567	ILMN_197567	LOC229395	XM_130929.4	XM_130929.4			38076601	XM_130929.4	LOC229395		ILMN_2528581	007380204	S	24	AGGCGGACCTTCTGTCCGGAGATTTGGCGTATTGACTCCCCAGATGGACA										
Mus musculus	Riken	ILMN_205738	ILMN_205738	A330008J08RIK	ri|A330008J08|PX00131O21|AK039257|2272					AK039257	A330008J08Rik		ILMN_1215333	000630768	S	1713	CATGGGTGGCTACTCACTGAAGAAAGCTGGTGCCCCTTCTACAGCTTCGG										
Mus musculus	MEEBO	ILMN_186517	ILMN_186517	ETOHI1	scl0013999.1_297				51706589	XM_485125	Etohi1		ILMN_2436195	005900026	S	20	CCTTGTACATTAAAATCTTCAAATCAATAAAAGAAGACATAGAGGTGAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201187	ILMN_201187	LOC382061	XM_356141.1	XM_356141.1			38089709	XM_356141.1	LOC382061		ILMN_1245034	006660044	S	347	TCTGCCAACCGAAGCCAGGCCCCTGTGAAGGCCCCATAGAAAAGGCTCCT										
Mus musculus	RefSeq	ILMN_211776	ILMN_211776	PET2	NM_008821.1	NM_008821.1		18630	6679280	NM_008821.1	Pet2	NP_032847.1	ILMN_2821371	005670575	S	3698	GGAGGTGGAGATTTCAGTGACTCTTCCAGCAGCTCTGAGGAAACAAACCA	X	-	86649621-86649670	XqC1	Mus musculus plasmacytoma expressed transcript 2 (Pet2), mRNA.				PC231; PC326; Pex3	PC231; PC326; Pex3
Mus musculus	RefSeq	ILMN_214258	ILMN_214258	5730507A09RIK	NM_183087.3	NM_183087.3		70638	146198608	NM_183087.3	5730507A09Rik	NP_898910.1	ILMN_1220717	000270646	S	877	TGTGGACACTGATAAGCCTGCAAAGTCTGGCCCTGCAAGATGCCACCGTG				7qC	Mus musculus RIKEN cDNA 5730507A09 gene (5730507A09Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW047451	AW047451
Mus musculus	RefSeq	ILMN_214258	ILMN_214258	5730507A09RIK	NM_183087.3	NM_183087.3		70638	146198608	NM_183087.3	5730507A09Rik	NP_898910.1	ILMN_2646045	006860372	S	1079	TTTCTCTCCTGCCCTTAGTGAGCTCTGGTCGCTTCAGGGGTATAGCACCT				7qC	Mus musculus RIKEN cDNA 5730507A09 gene (5730507A09Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW047451	AW047451
Mus musculus	Riken	ILMN_206244	ILMN_206244	RPGR	ri|C130057E07|PX00170E24|AK081631|2445					AK081631	Rpgr		ILMN_1244805	000610132	S	2151	CCGCGTGGTTTCTCTCAGCGTGGGGTTTCCTGACATACACAAGGAAGTGG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_212249	ILMN_212249	ACBD6	NM_028250.2	NM_028250.2		72482	142387798	NM_028250.2	Acbd6	NP_082526.1	ILMN_1232903	003440242	S	1280	ACGGCTGCTTGCCAGAAGAGGTGACGGGCTGCAAAGCGGTCTCTCTGCTG	1	+	157534148-157534197	1qG3	Mus musculus acyl-Coenzyme A binding domain containing 6 (Acbd6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]	MGC144462; 2610100E10Rik; MGC106946; MGC144461; 0610010G04Rik	MGC144462; 2610100E10Rik; MGC106946; MGC144461; 0610010G04Rik
Mus musculus	MEEBO	ILMN_224003	ILMN_224003	AQP2	scl47529.3.4_4				31560619	NM_009699	Aqp2		ILMN_2772954	003130411	S	630	GAATCCAGCCCGCTCCCTGGCTCCAGCAGTTGTCACTGGCAAGTTTGATG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the endosome membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 31303] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISM]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Organelle consisting of networks of 60nm tubules organized around the microtubule organizing centre in some cell types. They transport receptors from late endosomes back to the plasma membrane for recycling and are also involved in membrane trafficking [goid 55037] [evidence IDA]; The lipid bilayer surrounding a recycling endosome [goid 55038] [evidence IC ]	The directed movement of water (H2O) by the kidney [goid 3097] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of water [goid 42631] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210064	ILMN_210064	F730047E07RIK	NM_199467.1	NM_199467.1		212377	41054989	NM_199467.1	F730047E07Rik	NP_955761.1	ILMN_2730957	004670601	S	290	GTCGTCAGTTTATTGGTCAGGCAGGTGACAATTTAACCAATGTCAGCCTC	4	+	24434476-24434525	4qA3	Mus musculus RIKEN cDNA F730047E07 gene (F730047E07Rik), mRNA.				Gm134	Gm134
Mus musculus	RefSeq	ILMN_210064	ILMN_210064	F730047E07RIK	NM_199467.1	NM_199467.1		212377	41054989	NM_199467.1	F730047E07Rik	NP_955761.1	ILMN_2935838	006520494	S	3123	AGCAACGCTGAATCAGCACGTTGTCATCCAATTGATTCCTACCCTCACTC	4	+	24527365-24527414	4qA3	Mus musculus RIKEN cDNA F730047E07 gene (F730047E07Rik), mRNA.				Gm134	Gm134
Mus musculus	RefSeq	ILMN_210064	ILMN_210064	F730047E07RIK	NM_199467.1	NM_199467.1		212377	41054989	NM_199467.1	F730047E07Rik	NP_955761.1	ILMN_2601856	005290608	S	3136	CAGCACGTTGTCATCCAATTGATTCCTACCCTCACTCAGTCTCTGAAGGA	4	+	24527378-24527427	4qA3	Mus musculus RIKEN cDNA F730047E07 gene (F730047E07Rik), mRNA.				Gm134	Gm134
Mus musculus	RefSeq	ILMN_222973	ILMN_222973	GPR152	NM_206973.2	NM_206973.2		269053	71534279	NM_206973.2	Gpr152	NP_996856.1	ILMN_1240344	003190400	S	3154	GGATCTGGGGAAGCTGCAGGTGCAGAGTGCACTAGAATTTGAACCCCAGG	19	+	4144970-4145019	19qA	Mus musculus G protein-coupled receptor 152 (Gpr152), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gm673; A930009H15Rik	Gm673; A930009H15Rik
Mus musculus	RefSeq	ILMN_209365	ILMN_209365	2310037I24RIK	NM_133714.4	NM_133714.4		69612	153791545	NM_133714.4	2310037I24Rik	NP_598475.2	ILMN_2625058	001110367	S	805	TCAGACATGGAGAGGTGACCCTGACAGTGAAGCCGATAGCATAGACAGTG				15qF1	Mus musculus RIKEN cDNA 2310037I24 gene (2310037I24Rik), mRNA.				MGC101985; B930009D17; MGC102368	MGC101985; B930009D17; MGC102368
Mus musculus	RefSeq	ILMN_209365	ILMN_209365	2310037I24RIK	NM_133714.4	NM_133714.4		69612	153791545	NM_133714.4	2310037I24Rik	NP_598475.2	ILMN_1230221	004390487	S	614	GCCCTAGCACTTCATGCTCAAATGAAGAAGAGCAACCCAGGCCCTATGGG				15qF1	Mus musculus RIKEN cDNA 2310037I24 gene (2310037I24Rik), mRNA.				MGC101985; B930009D17; MGC102368	MGC101985; B930009D17; MGC102368
Mus musculus	RefSeq	ILMN_198845	ILMN_232927	C87414	XM_981565.1	XM_981565.1		381654	94374905	XM_981565.1	C87414	XP_986659.1	ILMN_1230956	002690674	S	1371	CAACAATGACTTCTCCATGTGCACCCTGAAGGCCCTTTTCCAGCACACAG	5	-	94065431-94065480	5qE2	PREDICTED: Mus musculus expressed sequence C87414, transcript variant 6 (C87414), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_198015	ILMN_232927	C87414	XM_981565.1	XM_981565.1		381654	94374905	XM_981565.1	C87414	XP_986659.1	ILMN_1243166	004780037	S	1790	GGTTGAGCTTAACATTGGGACCATTTCGATGGAATCTGATATCAGGGGGG	5	-	94065012-94065061	5qE2	PREDICTED: Mus musculus expressed sequence C87414, transcript variant 6 (C87414), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_200451	ILMN_232927	C87414	XM_981565.1	XM_981565.1		381654	94374905	XM_981565.1	C87414	XP_986659.1	ILMN_1242544	002140564	S	92	CCTCTCAGATGACATGTATGCTAGGCTCCCGTCGTGGAATACATTGATGG	5	-	94094481-94094498:94097554-94097585	5qE2	PREDICTED: Mus musculus expressed sequence C87414, transcript variant 6 (C87414), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_215383	ILMN_215383	TMEM98	NM_029537.1	NM_029537.1		103743	22095006	NM_029537.1	Tmem98	NP_083813.1	ILMN_2658815	001990196	S	931	GGAGAGTGGCAGTGTAATCCCACAGTTAGGGGAGACGCTGTGTACCTCTA	11	+	80635073-80635122	11qB5	Mus musculus transmembrane protein 98 (Tmem98), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI463522; RP23-480G5.1; 6530411B15Rik	AI463522; RP23-480G5.1; 6530411B15Rik
Mus musculus	RefSeq	ILMN_215383	ILMN_215383	TMEM98	NM_029537.1	NM_029537.1		103743	22095006	NM_029537.1	Tmem98	NP_083813.1	ILMN_2827646	004810561	S	990	CGCAGAAAGCTGCCGGGCTCGCTGCTACATTTAGTTCATTTAATGTTTCC	11	+	80635132-80635181	11qB5	Mus musculus transmembrane protein 98 (Tmem98), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI463522; RP23-480G5.1; 6530411B15Rik	AI463522; RP23-480G5.1; 6530411B15Rik
Mus musculus	Riken	ILMN_207390	ILMN_207390	C530038F07RIK	ri|C530038F07|PX00669N09|AK083047|2183					AK083047	C530038F07Rik		ILMN_1212809	001170400	S	1887	GTGTTTTTTTCCTGCTGGGAATGGAATCCAGGGCCTCATGGTAGTCCTGG										
Mus musculus	MEEBO	ILMN_219989	ILMN_219989	A530026G17	scl0223286.1_163				51769018	XM_488731	A530026G17		ILMN_2716126	000610711	S	2341	CGGCGTACAATGGTTCCTGTCTTCATGGTCTTCACTAGCAGATTACACAG										
Mus musculus	Riken	ILMN_204695	ILMN_204695	A330081F11RIK	ri|A330081F11|PX00133I14|AK039667|2434					AK039667	A330081F11Rik		ILMN_1218308	001690021	S	2105	GGAGGACAGAAGGGGGGTGGAATCGTTTTTATTTGGGTCTGCTTGGTCCC										
Mus musculus	RefSeq	ILMN_246064	ILMN_246064	VPRBP	NM_001015507.1	NM_001015507.1		321006	82617568	NM_001015507.1	Vprbp	NP_001015507.1	ILMN_3160268	006760593	S	4303	GGCAGAGGATGAGGATGAAGAGGAGGACCAGCAGACAGCTCGGACAACTC	9	+	106768000-106768030:106782265-106782283	9qF1	Mus musculus Vpr (HIV-1) binding protein (Vprbp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		AI447437; mKIAA0800; B930007L02Rik	AI447437; mKIAA0800; B930007L02Rik
Mus musculus	RefSeq	ILMN_216300	ILMN_216300	CFL1	NM_007687.2	NM_007687.2		12631	31542381	NM_007687.2	Cfl1	NP_031713.1	ILMN_1213376	005820392	S	2034	GGGTGATGCAAATCCCAGAAGCATGGGCCTATCGCCACTTAAAGGAGCCG	19	+	5494951-5495000	19qA	Mus musculus cofilin 1, non-muscle (Cfl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]	Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; The specification and formation of anisotropic intracellular organization or cell growth patterns [goid 30010] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence ISO]; Any process that reduces cell size [goid 45792] [evidence ISO]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of actin depolymerization [goid 30836] [evidence IMP]; The process by which the edges of the neural plate thicken and move up to form a U-shaped structure called the neural groove [goid 1842] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Cof; AA959946	Cof; AA959946
Mus musculus	RefSeq	ILMN_211022	ILMN_211022	OGT	NM_139144.2	NM_139144.2		108155	46909606	NM_139144.2	Ogt	NP_631883.2	ILMN_2647864	001260709	S	3302	TGCAGCTGGCAACAAACCTGACCACATGATTAAGCCTGTTGAAGTCACCG	X	+	98877608-98877657	XqD	Mus musculus O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) (Ogt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence TAS]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + protein = UDP + 4-N-(N-acetyl-D-glucosaminyl)-protein [goid 16262] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence TAS]	1110038P24Rik; AI115525; 4831420N21Rik	1110038P24Rik; AI115525; 4831420N21Rik
Mus musculus	RefSeq	ILMN_211022	ILMN_211022	OGT	NM_139144.2	NM_139144.2		108155	46909606	NM_139144.2	Ogt	NP_631883.2	ILMN_2611676	006960095	S	5034	ACTACTAAATGTGGGATTGGATAATAGACTTGGAGTGCCGCTGAGGCTGA	X	+	98879340-98879389	XqD	Mus musculus O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) (Ogt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence TAS]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + protein = UDP + 4-N-(N-acetyl-D-glucosaminyl)-protein [goid 16262] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence TAS]	1110038P24Rik; AI115525; 4831420N21Rik	1110038P24Rik; AI115525; 4831420N21Rik
Mus musculus	RefSeq	ILMN_211022	ILMN_211022	OGT	NM_139144.2	NM_139144.2		108155	46909606	NM_139144.2	Ogt	NP_631883.2	ILMN_1247078	000290520	S	3291	GTGGGAGCATTATGCAGCTGGCAACAAACCTGACCACATGATTAAGCCTG	X	+	98877597-98877646	XqD	Mus musculus O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) (Ogt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence TAS]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + protein = UDP + 4-N-(N-acetyl-D-glucosaminyl)-protein [goid 16262] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence TAS]	1110038P24Rik; AI115525; 4831420N21Rik	1110038P24Rik; AI115525; 4831420N21Rik
Mus musculus	RefSeq	ILMN_244528	ILMN_244528	3830402I07RIK	NM_001001187.1	NM_001001187.1		408068	47564130	NM_001001187.1	3830402I07Rik	NP_001001187.1	ILMN_2865882	003060326	S	316	GCGGCTACCTCTATGCTCCCGGGTGTGTTAGGAGGAGGGAATCAGAGAAC	13	-	68172070-68172119	13qB3	Mus musculus RIKEN cDNA 3830402I07 gene (3830402I07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218478	ILMN_218478	SRF	NM_020493.1	NM_020493.1		20807	10048413	NM_020493.1	Srf	NP_065239.1	ILMN_2988299	001230731	S	3991	CTTCTCCTGGGATGTTGACCCAGGAATAGTGGACATGGTCACATCTTCTG	17	-	46010080-46010129	17qC	Mus musculus serum response factor (Srf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence ISO]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	AW240594; AW049942	AW240594; AW049942
Mus musculus	MEEBO	ILMN_191871	ILMN_191871	A330068P14RIK	scl0327958.1_132				51828516	XM_126447	A330068P14Rik		ILMN_2482949	002360736	S	8	TGATCCATCTTGTCATCCCCTGTCACAGTTTAACCACTTACTGGCTCTGG										
Mus musculus	RefSeq	ILMN_209099	ILMN_209099	PPP1R9B	NM_172261.2	NM_172261.2		217124	50053702	NM_172261.2	Ppp1r9b	NP_758465.2	ILMN_2592507	001260736	S	4016	CCGAGTCCCCTGTAAATAGACCATGCCATCAATCAGTATTTCTTGCCCGT	11	+	94867898-94867947	11qD	Mus musculus protein phosphatase 1, regulatory subunit 9B (Ppp1r9b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IPI]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]	MGC38940	MGC38940
Mus musculus	RefSeq	ILMN_222398	ILMN_222398	RAMP3	NM_019511.3	NM_019511.3		56089	146134447	NM_019511.3	Ramp3	NP_062384.1	ILMN_2749052	004280224	S	391	ACTCATCCCACTGATCGCGGTTCCTGTCGTGCTGACTGTGGCTATGGCTG				11qA1	Mus musculus receptor (calcitonin) activity modifying protein 3 (Ramp3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IPI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA];  [goid 15027] [evidence IDA]	AI850306	AI850306
Mus musculus	RefSeq	ILMN_197808	ILMN_197808	LOC230148	XM_124247.3	XM_124247.3			38078341	XM_124247.3	LOC230148		ILMN_1256798	005550382	S	822	TGAGGAGTACGAGGTATGGAAAGTGCGCGAGCTCAAAAGAATCAAGCGGG										
Mus musculus	RefSeq	ILMN_223740	ILMN_223740	CRX	NM_007770.3	NM_007770.3		12951	141801104	NM_007770.3	Crx	NP_031796.1	ILMN_1247683	001710253	S	2795	TCCCTTCCCTGGCTACCCAGAGTGAAACTGATTAAAAATGTGGATCCCAC				7qA2	Mus musculus cone-rod homeobox containing gene (Crx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Crx1	Crx1
Mus musculus	RefSeq	ILMN_213387	ILMN_213387	OLFR570	NM_147110.1	NM_147110.1		259114	22128736	NM_147110.1	Olfr570	NP_667321.1	ILMN_2636578	002140154	S	770	CCTTAGCTACCATGCATCGCTTTGCAAAACATAAATCTCCATTAGCTATG	7	+	110049652-110049701	7qE3	Mus musculus olfactory receptor 570 (Olfr570), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR8-3	MOR8-3
Mus musculus	RefSeq	ILMN_212063	ILMN_212063	WDR32	NM_153167.2	NM_153167.2		242418	110815803	NM_153167.2	Wdr32	NP_694807.2	ILMN_2685873	002900246	S	1161	GTTCTTCTGGTTCTAGAGTTTCTGGTTCACCTTGTCATCACAATGATTCA	4	+	45385554-45385603	4qB1	Mus musculus WD repeat domain 32 (Wdr32), mRNA.				MGC103038; MGC11993; AA959934	MGC103038; MGC11993; AA959934
Mus musculus	RefSeq	ILMN_212063	ILMN_212063	WDR32	NM_153167.2	NM_153167.2		242418	110815803	NM_153167.2	Wdr32	NP_694807.2	ILMN_2741271	003990343	S	2338	CTGTTAAAATGACACCTTTATATCTCATGTGGGATTTTGTTGTGAAATTC	4	+	45387719-45387768	4qB1	Mus musculus WD repeat domain 32 (Wdr32), mRNA.				MGC103038; MGC11993; AA959934	MGC103038; MGC11993; AA959934
Mus musculus	RefSeq	ILMN_212063	ILMN_212063	WDR32	NM_153167.2	NM_153167.2		242418	110815803	NM_153167.2	Wdr32	NP_694807.2	ILMN_2622324	002630670	S	2200	GCACACTGGTGATTGAAAAAGTTCATCTTCATTTATCAGTATACTTGGCC	4	+	45387581-45387630	4qB1	Mus musculus WD repeat domain 32 (Wdr32), mRNA.				MGC103038; MGC11993; AA959934	MGC103038; MGC11993; AA959934
Mus musculus	RefSeq	ILMN_198957	ILMN_311324	EG665033	XR_035671.1	XR_035671.1		665033	149260297	XR_035671.1	EG665033		ILMN_2533531	006560711	S	7477	CAGACGTGCTATCAACAAATATCCCGGCAGAGACCTGCAAGCCAAGTGTG	9	-	105765130-105765175:105766476-105766479	9qF1	PREDICTED: Mus musculus predicted gene, EG665033 (EG665033), misc RNA.					
Mus musculus	RefSeq	ILMN_212873	ILMN_212873	FBLIM1	NM_133754.3	NM_133754.3		74202	110625769	NM_133754.3	Fblim1	NP_598515.3	ILMN_2837671	004260195	S	2842	AGCTGGTAGAGGTGCTGGCTTCCAAGTCTGATGGCCGGAGTCCTGTCTCT				4qE1	Mus musculus filamin binding LIM protein 1 (Fblim1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2410043F08Rik; Gt10; Cal	2410043F08Rik; Gt10; Cal
Mus musculus	RefSeq	ILMN_200352	ILMN_328474	LOC100040962	XM_001475302.1	XM_001475302.1		100040962	149266468	XM_001475302.1	LOC100040962	XP_001475352.1	ILMN_1232758	002680598	S	996	CCAGGCTGGATCCTTCTCAACAGTCTGTTTTACGGGAACACTTCATTACC	15	+	32715817-32715866	15qB3.1	PREDICTED: Mus musculus hypothetical protein LOC100040962 (LOC100040962), mRNA.					
Mus musculus	RefSeq	ILMN_221041	ILMN_221041	NT5C	NM_015807.1	NM_015807.1		50773	7657030	NM_015807.1	Nt5c	NP_056622.1	ILMN_1223097	003390468	S	718	CCCAGGAGGCCTACACGGGAAAGAAGGAGACTAGCACACAAATACAGTGG	11	-	115351776-115351825	11qE2	Mus musculus 5',3'-nucleotidase, cytosolic (Nt5c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9264] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IDA]	Umph-2; Umph2; Dnt; Dnt1	Umph-2; Umph2; Dnt; Dnt1
Mus musculus	MEEBO	ILMN_184684	ILMN_184684	TOMM40	scl31676.7_0				8394479	NM_016871	Tomm40		ILMN_1223361	003310364	S	1	CAGAGCATCACACCGTGTCTGGCCCTGGGTGGAGAGCTCGTCTACCACCG						The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the mitochondrial membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 32592] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Catalysis of the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion [goid 8308] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211518	ILMN_259983	TMUB2	NM_028076.2	NM_028076.2		72053	142368789	NM_028076.2	Tmub2	NP_082352.1	ILMN_2685150	002510020	S	475	TGAAGAGACCAGTGACAGTGGGGGAGACGCCACTGGAGAACCTGGAGCTA	11	+	102148913-102148962	11qD	Mus musculus transmembrane and ubiquitin-like domain containing 2 (Tmub2), mRNA. XM_920742 XM_920755 XM_920760 XM_984792	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		2010008E23Rik	2010008E23Rik
Mus musculus	RefSeq	ILMN_214940	ILMN_214940	CKAP2L	NM_181589.2	NM_181589.2		70466	31795584	NM_181589.2	Ckap2l	NP_853620.1	ILMN_1231885	002450270	S	2153	GGTGGCTTCTCTTAATGAGCTACTGGAAGTGGACAAAACAGAGTGTTTCA	2	-	129094832-129094881	2qF1	Mus musculus cytoskeleton associated protein 2-like (Ckap2l), mRNA.				2610318C08Rik; AV070319; 2010016H04Rik	2610318C08Rik; AV070319; 2010016H04Rik
Mus musculus	RefSeq	ILMN_208927	ILMN_208927	PLAUR	NM_011113.3	NM_011113.3		18793	148277660	NM_011113.3	Plaur	NP_035243.1	ILMN_2590884	005720497	S	1111	AACCAGAAGAGAATTGGAACAAGGGCTGCGGGCAGCAGGGGCCTCTTAGT				7qA3	Mus musculus plasminogen activator, urokinase receptor (Plaur), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	uPAR; u-PAR; Cd87	uPAR; u-PAR; Cd87
Mus musculus	MEEBO	ILMN_215648	ILMN_215648	4930415O20RIK	scl47550.4.1_4	XM_128114.2			38077139	XM_128114.2	4930415O20Rik		ILMN_1227811	004540347	S	410	CAATGACAAAACCTTCAGTCTTTACTGAGGAGCGCATGCTTGCAGGACAG										
Mus musculus	RefSeq	ILMN_257297	ILMN_257297	STAG2	NM_001077712.1	NM_001077712.1		20843	118150673	NM_001077712.1	Stag2	NP_001071180.1	ILMN_3123970	005080192	A	4728	CCAGTCTTGAACATGCTTATCCCATAGCAGCCCTGAACGTTTGCTTGTCC	X	+	39629125-39629174	XqA4	Mus musculus stromal antigen 2 (Stag2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		SAP2; SA-2; B230112I07Rik; 9230105L23Rik	SAP2; SA-2; B230112I07Rik; 9230105L23Rik
Mus musculus	RefSeq	ILMN_193390	ILMN_257297	STAG2	NM_001077712.1	NM_001077712.1		20843	118150673	NM_001077712.1	Stag2	NP_001071180.1	ILMN_1232962	004860500	S	4754	GCAGCCCTGAACGTTTGCTTGTCCTTTAAGATAAAAATGTAACGTTGTGA	X	+	39629151-39629200	XqA4	Mus musculus stromal antigen 2 (Stag2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		SAP2; SA-2; B230112I07Rik; 9230105L23Rik	SAP2; SA-2; B230112I07Rik; 9230105L23Rik
Mus musculus	RefSeq	ILMN_238311	ILMN_238311	JAK3	NM_010589.3	NM_010589.3		16453	46849770	NM_010589.3	Jak3	NP_034719.2	ILMN_3006451	002510392	S	3290	AGCTGGACGCGCTGTGGCGTGGAAGACCCGGATAGCAGCCAGGGGCGAGA	8	+	74617104-74617136:74617137-74617151:74619161-74619162	8qB3.3	Mus musculus Janus kinase 3 (Jak3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA];  [goid 4718] [evidence IDA]	wil; fae	wil; fae
Mus musculus	RefSeq	ILMN_188792	ILMN_226341	ITGA6	NM_008397.3	NM_008397.3		16403	142352784	NM_008397.3	Itga6	NP_032423.2	ILMN_1231492	002350068	S	3884	GCTGTGCCTCTGGTGAAAGTTCTGTCTTAAATGTGCAATAGAAGGTGATG	2	+	71694494-71694543	2qC2-qC3	Mus musculus integrin alpha 6 (Itga6), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits [goid 33627] [evidence IDA]; Any process that activates or increases the rate or extent of cell adhesion to another cell [goid 22409] [evidence IDA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IMP]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IGI]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IPI]	AI115430; 5033401O05Rik; Cd49f	AI115430; 5033401O05Rik; Cd49f
Mus musculus	RefSeq	ILMN_216500	ILMN_233451	CERCAM	NM_207298.2	NM_207298.2		99151	118131058	NM_207298.2	Cercam	NP_997181.1	ILMN_2671755	000290564	S	2585	CTCACATCTGGGGCCCATTAGCACCCTCTTTCCTGGTTGGTGGAAAGTGC	2	+	29738230-29738279	2qB	Mus musculus cerebral endothelial cell adhesion molecule (Cercam), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria [goid 9103] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2600006K01Rik; CerCAM; AL024097	2600006K01Rik; CerCAM; AL024097
Mus musculus	RefSeq	ILMN_216846	ILMN_240044	POT1B	NM_028370.1	NM_028370.1		72836	76677916	NM_028370.1	Pot1b	NP_082646.1	ILMN_1227495	001580672	S	751	GGCACCAGGACAAAGATTCCCTCTTGGAGAGTCTGCATACAAGACGTTGC	17	-	55832116-55832165	17qC	Mus musculus protection of telomeres 1B (Pot1b), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	2810458H16Rik	2810458H16Rik
Mus musculus	RefSeq	ILMN_213854	ILMN_213854	3830431G21RIK	XM_126991.8	XM_126991.8		217682	149263342	XM_126991.8	3830431G21Rik	XP_126991.2	ILMN_2641486	003370603	S	3365	GGTCCCTTCTTGGTGAGGGTGGTCTTAGGTAGGGTGTTTTGGAATCAGTG	12	+	81825041-81825090	12qD1	PREDICTED: Mus musculus RIKEN cDNA 3830431G21 gene, transcript variant 1 (3830431G21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209461	ILMN_209461	HOMER1	NM_011982.1	NM_011982.1		26556	6754223	NM_011982.1	Homer1	NP_036112.1	ILMN_2595990	001510672	S	906	GACTGAATTACTATATTTCCATTATCTATGTGGAAAAAGGAGCATTGAGC	13	+	94126173-94126222	13qC3	Mus musculus homer homolog 1 (Drosophila) (Homer1), transcript variant S, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [evidence IDA]	The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor coupled to effectors through GTP-binding proteins [goid 7216] [evidence TAS]; A process whereby force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control [goid 3009] [evidence IMP]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel [goid 32236] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SYN47; Ves-1; PSD-Zip45	SYN47; Ves-1; PSD-Zip45
Mus musculus	RefSeq	ILMN_185264	ILMN_185264	ZAN	NM_011741.1	NM_011741.1		22635	10048476	NM_011741.1	Zan	NP_035871.1	ILMN_2425569	006250129	S	11	GCCGGGAGTGCTTGTGATGGTGTTAGTCCCTGTCTTACTGCCCAGAGTGT	5	-	137918268-137918292:137918541-137918565	5qG2	Mus musculus zonadhesin (Zan), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187156	ILMN_187156	D230034L24RIK	scl48984.1.1_264						D230034L24Rik		ILMN_2441642	004070632	S	10	ATCCAGGGTCCTGTGAGACTTACCTGTCATCCTGGGGGAATGGCTACAGC										
Mus musculus	RefSeq	ILMN_222892	ILMN_257007	1110006G14RIK	XM_989766.1	XM_989766.1		68469	94381210	XM_989766.1	1110006G14Rik	XP_994860.1	ILMN_2756311	001170373	S	1098	GCCTCTTAGAACTGCGGCGGCGCAGTCACACGGCAAATCGACACTTTTCA				7qF1	PREDICTED: Mus musculus RIKEN cDNA 1110006G14 gene (1110006G14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220200	ILMN_220200	GSTM4	NM_026764.2	NM_026764.2		14865	30089695	NM_026764.2	Gstm4	NP_081040.1	ILMN_1214964	002320228	S	1349	GGGAGCTTAGATCTCCTTTATGCTAGCAGCACTGAGATTTGTCATGCAGG	3	-	107843528-107843577	3qF2.3	Mus musculus glutathione S-transferase, mu 4 (Gstm4), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The chemical reactions and pathways involving nitrobenzene (nitrobenzol), a derivative of benzene with an NO2 group attached to the ring. It is a yellow aromatic liquid used in perfumery and manufactured in large quantities in the preparation of aniline [goid 18916] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 42178] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IDA]	MGC40906; Gstb-4; Gstb4; GSTM7-7; 1110004G14Rik	MGC40906; Gstb-4; Gstb4; GSTM7-7; 1110004G14Rik
Mus musculus	RefSeq	ILMN_200833	ILMN_200833	LOC382228	XM_356341.1	XM_356341.1			38086440	XM_356341.1	LOC382228		ILMN_2540166	004540259	S	46	CAGTTTGGAAAGCAACACATAGACAACCTCTTCAGTGACCTGCAGGATGG										
Mus musculus	RefSeq	ILMN_223595	ILMN_223595	SPINT4	NM_030058.2	NM_030058.2		78239	118130688	NM_030058.2	Spint4	NP_084334.1	ILMN_1240354	007160112	S	567	TGAACTGAAAAGCACGGTGTGTTCGTGGAGGTTCTCGGATGGGCCATCTG	2	+	164527769-164527818	2qH3	Mus musculus serine protease inhibitor, Kunitz type 4 (Spint4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	9230105I15Rik	9230105I15Rik
Mus musculus	MEEBO	ILMN_213061	ILMN_213061	ADPGK	scl0072141.1_1	NM_028121.1			21312405	NM_028121.1	Adpgk		ILMN_2633148	001500601	S	2042	GAAACCCCTGGGAGAGCTATGAGCCACCTGACCATTCTGCACTTGCTTGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ADP + D-glucose = AMP + D-glucose 6-phosphate [goid 43843] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201549	ILMN_201549	PIRA3	NM_011090.1	NM_011090.1		18726	6755065	NM_011090.1	Pira3	NP_035220.1	ILMN_2883326	005870113	S	1962	GGCAAAGCCATAGACAGACCCACCCTGCAGCTGGAAACTAATCTAAAGAG	7	-	3860278-3860287:3860288-3860327	7qA1	Mus musculus paired-Ig-like receptor A3 (Pira3), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	7M1	7M1
Mus musculus	RefSeq	ILMN_201549	ILMN_201549	PIRA3	NM_011090.1	NM_011090.1		18726	6755065	NM_011090.1	Pira3	NP_035220.1	ILMN_2603871	005860047	S	954	CAGGAATCTATGAACACTATGACCCCAGGCTCTCAGCACTGCCCAGCCCT	7	-	3864343-3864390:3864515-3864516	7qA1	Mus musculus paired-Ig-like receptor A3 (Pira3), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	7M1	7M1
Mus musculus	RefSeq	ILMN_193452	ILMN_244602	FUT10	NM_001012517.4	NM_001012517.4		171167	146198828	NM_001012517.4	Fut10	NP_001012535.1	ILMN_1249466	003170195	S	2901	GGCAGAACCTGTCTGTGGAGAGTTTCTCCTCAACCTCACATTTGTCACGG				8qA3	Mus musculus fucosyltransferase 10 (Fut10), transcript variant A, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IEA]	MGC40819	MGC40819
Mus musculus	MEEBO	ILMN_222418	ILMN_222418	PSG17	scl31702.4.1_28	NM_007677.1			6679494	NM_007677.1	Psg17		ILMN_2749307	002230746	S	1280	AACAACAGACAGCAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACG							The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_228535	ILMN_228535	SORBS1	NM_001034962.1	NM_001034962.1		20411	78000178	NM_001034962.1	Sorbs1	NP_001030134.1	ILMN_3025162	000520484	I	246	ATAATTCCCGTGAAGACAGTGAAAAGCCCTTCAGGCCTAGTACTCCCTCC	19	-	40470170-40470219	19qC3	Mus musculus sorbin and SH3 domain containing 1 (Sorbs1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; An adherens junction which connects a cell to the extracellular matrix [goid 5924] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts [goid 43149] [evidence IDA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the insulin receptor [goid 5158] [evidence IDA]	SH3P12; 2310065E01Rik; Sh3d5; mKIAA1296; CAP; 9530001P15Rik	SH3P12; 2310065E01Rik; Sh3d5; mKIAA1296; CAP; 9530001P15Rik
Mus musculus	RefSeq	ILMN_248603	ILMN_248603	ACSM3	NM_212441.2	NM_212441.2		20216	85810987	NM_212441.2	Acsm3	NP_997606.2	ILMN_3075043	002970356	I	89	GCGGGTCTACTATCACTCCAGCTGTGTGGGAAGCAGTATCTTTAGTGAGG	7	+	126904525-126904574	7qF2	Mus musculus acyl-CoA synthetase medium-chain family member 3 (Acsm3), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of a long-chain carboxylic acid to an acceptor, coupled to the hydrolysis of ATP [goid 15645] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	Sa; Sah	Sa; Sah
Mus musculus	RefSeq	ILMN_238013	ILMN_238013	IFT57	NM_028680.2	NM_028680.2		73916	31560070	NM_028680.2	Ift57	NP_082956.2	ILMN_2796440	004830039	S	2002	CATGGTCACCCTCTGGTAGTGACAGTCCTTTATTAGGCACCCTACTCAGC	16	+	49684214-49684263	16qB5	Mus musculus intraflagellar transport 57 homolog (Chlamydomonas) (Ift57), mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	4833420A15Rik; MHS4R2; Esrrbl1; Hippi	4833420A15Rik; MHS4R2; Esrrbl1; Hippi
Mus musculus	RefSeq	ILMN_209453	ILMN_209453	GIMAP7	NM_146167.3	NM_146167.3		231932	56549088	NM_146167.3	Gimap7	NP_666279.1	ILMN_2595918	000670204	S	1033	CCACCTCACTCCTGACCACTCTCCCTGCTGACCCTTTTCTAACAGCCATT	6	+	48674399-48674448	6qB2.3	Mus musculus GTPase, IMAP family member 7 (Gimap7), mRNA.				Ian3; IAN7; MGC41480	Ian3; IAN7; MGC41480
Mus musculus	MEEBO	ILMN_188873	ILMN_188873	TMEM7	scl35305.4.1_77				23346528	NM_153100	Tmem7		ILMN_1239067	004480561	S	17	GCTTCTCATTAAAAGCCGCTGAGTTTTCTATCTTCAGATGGTTAGTCTCC										
Mus musculus	RefSeq	ILMN_248996	ILMN_248996	D4WSU114E	NM_001025365.1	NM_001025365.1		28010	70778945	NM_001025365.1	D4Wsu114e	NP_001020536.1	ILMN_3162138	005560040	S	1466	CTGAGGAGAAGCCCCTGAGAGCTGGAAGTGGAGAAGATGGAGGTGGCTCA	4	-	147235012-147235061	4qE2	Mus musculus DNA segment, Chr 4, Wayne State University 114, expressed (D4Wsu114e), mRNA.				AA553001; AI853621	AA553001; AI853621
Mus musculus	RefSeq	ILMN_185698	ILMN_260619	SLITRK1	NM_199065.2	NM_199065.2		76965	148287020	NM_199065.2	Slitrk1	NP_951020.1	ILMN_2429238	006770523	S	4083	GTCACTCTAGTGCTTAGGCTGCGACCCTATGGTAGCAATTGTGTGCTGGT				14qE3	Mus musculus SLIT and NTRK-like family, member 1 (Slitrk1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	3200001I04Rik	3200001I04Rik
Mus musculus	RefSeq	ILMN_194638	ILMN_253374	LOC674288	XM_973456.1	XM_973456.1		674288	94406356	XM_973456.1	LOC674288	XP_978550.1	ILMN_1237037	003290072	S	542	CGAGCGACGTTAAGAGGCGGCTGCGGCGGACCGGGCGGCCGCTGCAGCCC					PREDICTED: Mus musculus hypothetical protein LOC674288 (LOC674288), mRNA.					
Mus musculus	RefSeq	ILMN_198508	ILMN_227151	LOC436185	XM_906768.1	XM_906768.1		436185	82999758	XM_906768.1	LOC436185	XP_911861.1	ILMN_2531939	004290703	S	127	TCAGAGATTCTCTGTCTCGCGTTGCCTTTTGGGAAGGTCTCCAACCTACT				XqA1.1	PREDICTED: Mus musculus similar to SMPTB (LOC436185), mRNA.					
Mus musculus	RefSeq	ILMN_199029	ILMN_243464	EG237361	XM_905111.2	XM_905111.2		237361	94388293	XM_905111.2	EG237361	XP_910204.1	ILMN_1253958	006560332	S	85	CCGCATTGGTAAGCACCGCAAGCACCCAGGCAGCCGCGGGAATGCTGGAG				10qB4	PREDICTED: Mus musculus predicted gene, EG237361 (EG237361), mRNA.					
Mus musculus	RefSeq	ILMN_194743	ILMN_239686	PHIP	NM_001081216.1	NM_001081216.1		83946	124487034	NM_001081216.1	Phip	NP_001074685.1	ILMN_1235559	003400246	S	3013	GAGTGGTTGCCTTCAGCTTGGATTACAGACACACTTCCCAGGAGATGTCC	9	-	82789653-82789702	9qE2	Mus musculus pleckstrin homology domain interacting protein (Phip), mRNA.		The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810004D21Rik; Ndrp; Wdr11; 4632404O06Rik	2810004D21Rik; Ndrp; Wdr11; 4632404O06Rik
Mus musculus	RefSeq	ILMN_194743	ILMN_239686	PHIP	NM_001081216.1	NM_001081216.1		83946	124487034	NM_001081216.1	Phip	NP_001074685.1	ILMN_2509204	007100114	S	10341	GTTAGTTTTGATGCATAATTCTTGGAATCCTTTTATACAAACTAGAATGT	9	-	82760104-82760153	9qE2	Mus musculus pleckstrin homology domain interacting protein (Phip), mRNA.		The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810004D21Rik; Ndrp; Wdr11; 4632404O06Rik	2810004D21Rik; Ndrp; Wdr11; 4632404O06Rik
Mus musculus	RefSeq	ILMN_194743	ILMN_239686	PHIP	NM_001081216.1	NM_001081216.1		83946	124487034	NM_001081216.1	Phip	NP_001074685.1	ILMN_2757011	003870019	S	7468	CTGTCAGTCTTGAAGAAGAATGAAAAGTAATGCATTTGGGCTTTTTAGAT	9	-	82762977-82763026	9qE2	Mus musculus pleckstrin homology domain interacting protein (Phip), mRNA.		The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810004D21Rik; Ndrp; Wdr11; 4632404O06Rik	2810004D21Rik; Ndrp; Wdr11; 4632404O06Rik
Mus musculus	RefSeq	ILMN_209112	ILMN_209112	PIGX	NM_024464.2	NM_024464.2		72084	34328330	NM_024464.2	Pigx	NP_077784.1	ILMN_2592656	006550053	S	810	CAGTGGGACTGACTATACATACCTCTTTAGTGTGTTCTGTGACGCTGCTC	16	-	32084636-32084685	16qB2	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class X (Pigx), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]		2010319C14Rik	2010319C14Rik
Mus musculus	RefSeq	ILMN_207265	ILMN_313917	LOC100047374	XM_001478006.1	XM_001478006.1		100047374	149257969	XM_001478006.1	LOC100047374	XP_001478056.1	ILMN_2586293	005270278	S	595	CGGACCCTCTCCAGGAATGGTTTGCCTTGTCATGGATTGCTTAGGTCCTG					PREDICTED: Mus musculus hypothetical protein LOC100047374 (LOC100047374), mRNA.					
Mus musculus	RefSeq	ILMN_255512	ILMN_255512	BMP10	NM_009756.1	NM_009756.1		12154	6857762	NM_009756.1	Bmp10	NP_033886.1	ILMN_2935098	001510543	S	1005	CTGGATCATCGCTCCTCCTGGGTATGAAGCCTATGAGTGCCGGGGTGTGT	6	+	87384228-87384277	6qD1	Mus musculus bone morphogenetic protein 10 (Bmp10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]; Any process that decreases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division [goid 10614] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [evidence IMP]; The process whose specific outcome is the progression of a ventricular cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55015] [evidence IDA]; The process by which the anatomical structure of cardiac atrium muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55009] [pmid 10072785] [evidence IEP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [pmid 10072785] [evidence IEP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_235985	ILMN_235985	LUC7L2	NM_138680.1	NM_138680.1		192196	20373166	NM_138680.1	Luc7l2	NP_619621.1	ILMN_2963634	001850246	S	2487	CAGAGCTGTAGTGAGCAGCTTCTGTAAGGAAAGAGTGAACCTGTAGAAGC	6	+	38559309-38559358	6qB1	Mus musculus LUC7-like 2 (S. cerevisiae) (Luc7l2), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cgi74; CGI-74; AA522013; 4930471C18Rik; CGI-59; AU015269	Cgi74; CGI-74; AA522013; 4930471C18Rik; CGI-59; AU015269
Mus musculus	RefSeq	ILMN_195286	ILMN_235985	LUC7L2	NM_138680.1	NM_138680.1		192196	20373166	NM_138680.1	Luc7l2	NP_619621.1	ILMN_2659098	005910327	S	2570	GACAAGCCTGAATAAAAACCATATGTAACCAACATACTGAAACAGCAGTT	6	+	38559392-38559441	6qB1	Mus musculus LUC7-like 2 (S. cerevisiae) (Luc7l2), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cgi74; CGI-74; AA522013; 4930471C18Rik; CGI-59; AU015269	Cgi74; CGI-74; AA522013; 4930471C18Rik; CGI-59; AU015269
Mus musculus	RefSeq	ILMN_195286	ILMN_235985	LUC7L2	NM_138680.1	NM_138680.1		192196	20373166	NM_138680.1	Luc7l2	NP_619621.1	ILMN_2765407	006200309	S	892	GTGTCTGCGAGGTCTGCTCTGCGTATTTAGGTCTTCATGACAATGACAGG	6	+	38542671-38542720	6qB1	Mus musculus LUC7-like 2 (S. cerevisiae) (Luc7l2), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cgi74; CGI-74; AA522013; 4930471C18Rik; CGI-59; AU015269	Cgi74; CGI-74; AA522013; 4930471C18Rik; CGI-59; AU015269
Mus musculus	RefSeq	ILMN_218494	ILMN_226694	LOC668418	XM_001001365.1	XM_001001365.1		668418	94393199	XM_001001365.1	LOC668418	XP_001001365.1	ILMN_2696518	000730386	S	848	GGGCTCCAGGGAAAGGACTAGAATGGATTGGAGAAATTAATCCAGATAGC	12	-	114396220-114396269		PREDICTED: Mus musculus similar to Ig heavy chain V region 441 precursor (LOC668418), mRNA.					
Mus musculus	RefSeq	ILMN_190954	ILMN_190954	WDR35	NM_172470.2	NM_172470.2		74682	40254214	NM_172470.2	Wdr35	NP_766058.2	ILMN_1258932	005080072	S	3890	CCTAAGGATTCATAGGAAAATCACCTCATCATCTGCTAGTTGTATTTTTG	12	+	9035042-9035091	12qA1.1	Mus musculus WD repeat domain 35 (Wdr35), mRNA.				KIAA1336; 4930459M12Rik; mKIAA1336; 4931430C06	KIAA1336; 4930459M12Rik; mKIAA1336; 4931430C06
Mus musculus	RefSeq	ILMN_209052	ILMN_209052	GTRGEO22	NM_148934.2	NM_148934.2		110012	114051828	NM_148934.2	Gtrgeo22	NP_683736.1	ILMN_2592095	001410367	S	395	TGAGCGTGGCCTACGAGTGTCTGAGTGCCAGCGGCCGCAAGAAGAAACCG	10	+	79138165-79138214	10qC1	Mus musculus gene trap ROSA b-geo 22 (Gtrgeo22), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The assembly and organization of the sperm flagellar axoneme, the bundle of microtubules and associated proteins that forms the core of the eukaryotic sperm flagellum, and is responsible for movement [goid 7288] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AV005629	AV005629
Mus musculus	RefSeq	ILMN_220539	ILMN_227473	1110013L07RIK	NM_001014995.1	NM_001014995.1		68521	67846100	NM_001014995.1	1110013L07Rik	NP_001014995.1	ILMN_1217406	006380242	S	2742	AATGCCCCCTGCTTACAGCATTGACAGAGGAAAATTAGTAACCTCCCCCC	3	+	88992894-88992943	3qF1	Mus musculus RIKEN cDNA 1110013L07 gene (1110013L07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197718	ILMN_227473	1110013L07RIK	NM_001014995.1	NM_001014995.1		68521	67846100	NM_001014995.1	1110013L07Rik	NP_001014995.1	ILMN_1223229	003400647	S	909	TATGCTGCCCACCTATCCCCCTACACAGACCTTGCCCAGAATGGGGCCAG	3	+	88988568-88988617	3qF1	Mus musculus RIKEN cDNA 1110013L07 gene (1110013L07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199759	ILMN_199759	LOC382967	XM_356779.1	XM_356779.1			38076910	XM_356779.1	LOC382967		ILMN_2536381	001260079	S	543	TGTGAGCACTGGGGAGGATGCTGTGAGCACTGGGGAGAATGCTGTGAGCA										
Mus musculus	RefSeq	ILMN_196533	ILMN_196533	9430077D24RIK	XM_135109.4	XM_135109.4			38090091	XM_135109.4	9430077D24Rik		ILMN_2524699	001780494	S	848	TTATGACCTTTGCCAGCGCCTGTTCCAACATGGCCTTCTGGTTGCCCACC										
Mus musculus	MEEBO	ILMN_187399	ILMN_187399	6230416J20RIK	scl24153.17_322				46559771	NM_173400	6230416J20Rik		ILMN_2443794	004390204	S	20	TCCCCCGACTTTATGTGATTTCTGATCCAGCTGTATACACACCTTGGTGC										
Mus musculus	RefSeq	ILMN_212213	ILMN_212213	2900011O08RIK	NM_144518.3	NM_144518.3		67254	110625872	NM_144518.3	2900011O08Rik	NP_653101.1	ILMN_2624047	006450040	S	596	GCTGATTTCCTGAGAATCAAGTTAAAACCTCTAGACAAAGTAACCAAGAC	16	+	14096022-14096071	16qA1	Mus musculus RIKEN cDNA 2900011O08 gene (2900011O08Rik), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_212213	ILMN_212213	2900011O08RIK	NM_144518.3	NM_144518.3		67254	110625872	NM_144518.3	2900011O08Rik	NP_653101.1	ILMN_1217298	002600544	S	508	GATCCACAGACTGGTACAGAAGAGAGACTTCCTGGTGGATGATGCCGAGG	16	+	14094034-14094083	16qA1	Mus musculus RIKEN cDNA 2900011O08 gene (2900011O08Rik), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_212213	ILMN_212213	2900011O08RIK	NM_144518.3	NM_144518.3		67254	110625872	NM_144518.3	2900011O08Rik	NP_653101.1	ILMN_2636325	005670246	S	1601	GGAAGGTCACACTGCTGGCCCAACACACACTGACAGGAAGCCTGACCCAA	16	+	14100833-14100882	16qA1	Mus musculus RIKEN cDNA 2900011O08 gene (2900011O08Rik), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_206628	ILMN_206628	7530422H14RIK	ri|7530422H14|PX00312I20|AK078719|1073					AK078719	7530422H14Rik		ILMN_2581500	000130221	S	707	CTGGAGGAGTCAAGGCTGCCTCAGCAAAGTACCATCATGCTATCACTGAG										
Mus musculus	RefSeq	ILMN_212747	ILMN_245229	DUS2L	NM_025518.3	NM_025518.3		66369	142365381	NM_025518.3	Dus2l	NP_079794.1	ILMN_1256843	005090754	S	1525	TGTAACCTTGGACAGTAGTGAGGAGAATCTTCTGGAAGGCTGCTGACTCC	8	+	108577384-108577429:108577430-108577433	8qD3	Mus musculus dihydrouridine synthase 2-like (SMM1, S. cerevisiae) (Dus2l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor [goid 17150] [evidence IEA]	2310016K04Rik	2310016K04Rik
Mus musculus	RefSeq	ILMN_199797	ILMN_199797	LOC383022	XM_356802.1	XM_356802.1			38077495	XM_356802.1	LOC383022		ILMN_1236559	004780086	S	286	CCCAGAAGTCGGGGAGAGCTTTGTGTAGCCCTAACGGAAGAGTGTTGCTT										
Mus musculus	Riken	ILMN_203400	ILMN_203400	5330440M16RIK	ri|5330440M16|PX00055A19|AK030640|2992					AK030640	5330440M16Rik		ILMN_2557014	007000020	S	2937	GCTAAACTGGCTTTATCTGCTGTGTCCAAGCATGGCTCCAATAATGAACC										
Mus musculus	RefSeq	ILMN_216549	ILMN_216549	TMEM121	NM_153776.2	NM_153776.2		69195	134053940	NM_153776.2	Tmem121	NP_722471.2	ILMN_1231884	001470082	S	1338	TGTCTGCTTCTTCATCTCAGGAATCTCTCGGACCACGGACTCTCAGCCTC	12	+	114422496-114422545	12qF1	Mus musculus transmembrane protein 121 (Tmem121), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Hole; 2410008J05Rik	Hole; 2410008J05Rik
Mus musculus	RefSeq	ILMN_214072	ILMN_214072	BTBD9	NM_172618.1	NM_172618.1		224671	27819603	NM_172618.1	Btbd9	NP_766206.1	ILMN_2643933	002060280	S	1397	GAATGGGGACACTAAGAATTATGACTGGGACTCTGGCTACACGTGCCACC	17	-	30436510-30436559	17qA3.3	Mus musculus BTB (POZ) domain containing 9 (Btbd9), mRNA.		The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700023F20Rik; 4930402L05; AI464421	1700023F20Rik; 4930402L05; AI464421
Mus musculus	MEEBO	ILMN_211833	ILMN_211833	OLFR267	scl24285.1.1_327	XM_143799.1			20828432	XM_143799.1	Olfr267		ILMN_1237477	004780551	S	882	GAAGTAAAAGATGCAATGATAAAACTGCTGGGCAAAGTGCCCTTGGCACC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	MEEBO	ILMN_214715	ILMN_214715	LRFN2	scl50629.3.1_224	XM_128642.1			20900266	XM_128642.1	Lrfn2		ILMN_2651081	002140075	S	3027	ACCCAGCGGGGTGTGCTCAGGGAATGGGACTCGCTCATGTGTCAGACTGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_195560	ILMN_238143	RFTN1	NM_181397.2	NM_181397.2		76438	118130664	NM_181397.2	Rftn1	NP_852062.1	ILMN_1240868	005560349	S	2437	GAGAATAGGAGGTACCCAAGCCTCCTGCCTGTCTTAAGGTAGTTCTATAG	17	-	50132947-50132996	17qC	Mus musculus raftlin lipid raft linker 1 (Rftn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			2310015N21Rik; AI853526	2310015N21Rik; AI853526
Mus musculus	MEEBO	ILMN_215249	ILMN_215249	QTRTD1	scl48463.11_73	XM_148491.1			20892550	XM_148491.1	Qtrtd1		ILMN_2657203	002940246	S	2372	CTGAGGCTGGTTGTCCCTCCGGGGTTCTCTGTAATTCTGTATTTTTGTGG								Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208991	ILMN_208991	CCDC44	NM_027346.1	NM_027346.1		70207	39930434	NM_027346.1	Ccdc44	NP_081622.1	ILMN_1219565	001500735	S	1017	TATTGAATAAGCGGCCTCGACTAGACTTGGCTCCGGCTCTTTCCTAGGCC	11	+	105934606-105934615:105934616-105934655	11qE1	Mus musculus coiled-coil domain containing 44 (Ccdc44), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			RP23-81G14.4; 2310066I18Rik	RP23-81G14.4; 2310066I18Rik
Mus musculus	RefSeq	ILMN_220217	ILMN_220217	DAP	NM_146057.1	NM_146057.1		223453	22122538	NM_146057.1	Dap	NP_666169.1	ILMN_1234812	004260687	S	1034	GGAGGGATGGGCTCCTCAAATTTTTTGAGCAATTTAGTACCCCAGCAGTG	15	+	31218520-31218569	15qB2	Mus musculus death-associated protein (Dap), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		4921531N22Rik; AU040360; AI789753; MGC6998; MGC19154	4921531N22Rik; AU040360; AI789753; MGC6998; MGC19154
Mus musculus	RefSeq	ILMN_209108	ILMN_209108	RHOG	NM_019566.3	NM_019566.3		56212	147899662	NM_019566.3	Rhog	NP_062512.1	ILMN_2592620	002630703	S	916	GTATTCCATGAGTTCAACTAAGCCAGGTTTACCTAAGAGGCCAACCCGGT				7qE3	Mus musculus ras homolog gene family, member G (Rhog), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISO]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISO]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISO]	Sid10750; Arhg	Sid10750; Arhg
Mus musculus	RefSeq	ILMN_190821	ILMN_258941	GAS2L1	NM_030228.2	NM_030228.2		78926	89357941	NM_030228.2	Gas2l1	NP_084504.1	ILMN_1227503	004390349	S	1125	ACACCCTGGGAAAAGTTCCCGTGCGTGGGGGCGGTACCGGCTTTCCATCT	11	-	4962028-4962077	11qA1	Mus musculus growth arrest-specific 2 like 1 (Gas2l1), transcript variant alpha, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		RP23-64E17.7; 4930500E24Rik; TU-71.1; GAR22; D0Jmb1	RP23-64E17.7; 4930500E24Rik; TU-71.1; GAR22; D0Jmb1
Mus musculus	RefSeq	ILMN_219490	ILMN_219490	OLFR1242	NM_146968.1	NM_146968.1		258970	22128994	NM_146968.1	Olfr1242	NP_667179.1	ILMN_2709517	005820386	S	769	GCTAGACCTGTCTCCAACTTTCCAGTGGATAAATATATTGCTGTGTTTTA	2	-	89333649-89333698	2qE1	Mus musculus olfactory receptor 1242 (Olfr1242), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR231-5	MOR231-5
Mus musculus	RefSeq	ILMN_214331	ILMN_320575	LOC100044452	XM_001472287.1	XM_001472287.1		100044452	149258410	XM_001472287.1	LOC100044452	XP_001472337.1	ILMN_2646926	003190634	S	15	CCGCCTACAGTTTTTAAAAAGAGTCTCTAATGTTGCCTACTCCCACGGAC					PREDICTED: Mus musculus similar to SIGNR2 (LOC100044452), mRNA.					
Mus musculus	RefSeq	ILMN_216961	ILMN_216961	DRG2	NM_021354.1	NM_021354.1		13495	10946677	NM_021354.1	Drg2	NP_067329.1	ILMN_2677494	006330278	S	1503	AGCACATAGTGGCCTCAGGATGAAGCCTCCCACAGGTCCTCCCAACACAG	11	+	60281997-60282046	11qB2	Mus musculus developmentally regulated GTP binding protein 2 (Drg2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI461605; AI255295	AI461605; AI255295
Mus musculus	RefSeq	ILMN_208689	ILMN_208689	NDUFA2	NM_010885.4	NM_010885.4		17991	146134432	NM_010885.4	Ndufa2	NP_035015.2	ILMN_2588601	005360703	S	138	TCGTGCAACGGTACGTGGAGCTGAAGAAGGCGCACCCCAACCTGCCCATT				18qB2	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2 (Ndufa2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence TAS]	AV000592; B8; C1-B8	AV000592; B8; C1-B8
Mus musculus	MEEBO	ILMN_193845	ILMN_193845	LTB4R2	scl46267.1_29				10048441	NM_020490	Ltb4r2		ILMN_2500952	003520133	S	14	CAGACGGTACAAGGCTGTAGGGATACAGGAAAGAAGTGTGGATTCTTGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The directed movement of keratinocytes, epidermal cells which synthesize keratin, from one site to another [goid 51546] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate [goid 1632] [evidence IDA]; Combining with a leukotriene to initiate a change in cell activity. Leukotrienes are pharmacologically active substances with a set of three conjugated double bonds; some contain a peptide moiety based on cysteine [goid 4974] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193845	ILMN_193845	LTB4R2	scl46267.1_29				10048441	NM_020490	Ltb4r2		ILMN_2709729	007050039	S	833	CTTCAGTTCCAGCGTCAACCCAGTGCTCTATGTCTTCACTGCGGGGGATT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The directed movement of keratinocytes, epidermal cells which synthesize keratin, from one site to another [goid 51546] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate [goid 1632] [evidence IDA]; Combining with a leukotriene to initiate a change in cell activity. Leukotrienes are pharmacologically active substances with a set of three conjugated double bonds; some contain a peptide moiety based on cysteine [goid 4974] [evidence IEA]		
Mus musculus	Riken	ILMN_203645	ILMN_203645	9330199L01RIK	ri|9330199L01|PX00107G23|AK034491|4192					AK034491	9330199L01Rik		ILMN_1231499	006110164	S	4075	GTCTCTCACTTCCACCCCAGTCCAGGCAATCACTTAGACACAGTGGCACC										
Mus musculus	RefSeq	ILMN_218758	ILMN_218758	MMP15	NM_008609.3	NM_008609.3		17388	55926148	NM_008609.3	Mmp15	NP_032635.1	ILMN_2784078	006370521	S	4058	GAGAGGACAGCCCAGCTTCCCAAATGACTCCACATCTGGCGGTCTGGAAG	8	+	97897972-97898021	8qD1	Mus musculus matrix metallopeptidase 15 (Mmp15), mRNA. XM_001002221	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISS]	MT2-MMP; AI503551	MT2-MMP; AI503551
Mus musculus	Riken	ILMN_204115	ILMN_204115	B130047N10RIK	ri|B130047N10|PX00158B14|AK045211|3161					AK045211	B130047N10Rik		ILMN_1255178	001980286	S	2812	TGTCCAAGGAACTCTGAGTAACACTGAAAATAGCTGCATGGCCTGGCCTC										
Mus musculus	RefSeq	ILMN_222223	ILMN_222223	ICAM5	NM_008319.1	NM_008319.1		15898	6680336	NM_008319.1	Icam5	NP_032345.1	ILMN_2746521	000610739	S	2681	TGTCTCAATGGCGCGGGCGGGACACCGGGTGCAGAAGGCGGAGCAGAGAC	9	+	20843231-20843280	9qA3	Mus musculus intercellular adhesion molecule 5, telencephalin (Icam5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Icam3; TLN; ICAM-3; MGC130520; CD50; Tlcn	Icam3; TLN; ICAM-3; MGC130520; CD50; Tlcn
Mus musculus	RefSeq	ILMN_218590	ILMN_225956	ZFP694	XM_923836.2	XM_923836.2		210162	94381272	XM_923836.2	Zfp694	XP_928929.2	ILMN_2697712	003360348	S	2935	GCCACTTAGTAACATGTACACAGGATTGATACTTATATGGAAGCATGATT				7qF3	PREDICTED: Mus musculus zinc finger protein 694, transcript variant 6 (Zfp694), mRNA.					
Mus musculus	MEEBO	ILMN_222658	ILMN_222658	RNF166	scl34222.7_318	XM_134599.3			38089477	XM_134599.3	Rnf166		ILMN_2753021	003870246	S	1612	CCTCAGGCAGGGACTTCCCTTACCAGTGGTAGAGCCCTCAAGGGCCAGAG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222997	ILMN_257307	LOC675899	XM_985882.1	XM_985882.1		675899	94370416	XM_985882.1	LOC675899	XP_990976.1	ILMN_1225187	006510575	S	1205	TCGGGTCTTACCTTAGATCTCACTCAGCAACAAGTACATTCTCTGCTTAC					PREDICTED: Mus musculus similar to H2A histone family, member Z (LOC675899), mRNA.					
Mus musculus	RefSeq	ILMN_213633	ILMN_313115	D130052B06RIK	XR_035087.1	XR_035087.1		216644	149261596	XR_035087.1	D130052B06Rik		ILMN_2639166	001230360	S	549	ACACTGTCCTGCACTGGTGACCCATCTACACTGTCCTGCACAGGTGACCC	11	+	33523872-33523921	11qA4	PREDICTED: Mus musculus RIKEN cDNA D130052B06 gene (D130052B06Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_201413	ILMN_201413	LOC385122	XM_358070.1	XM_358070.1			38093577	XM_358070.1	LOC385122		ILMN_1221513	001450136	S	1	ATGGAGTCCCGTGAAGAATCCCAGGAATCAGACTCTGGGACCAGCATCAG										
Mus musculus	RefSeq	ILMN_200187	ILMN_200187	LOC385887	XM_358985.1	XM_358985.1			38080846	XM_358985.1	LOC385887		ILMN_1243607	000430474	S	555	CCAGGACACAATAAGAAGACCAAACCTACGGATAATAGGAAATGAGATGC										
Mus musculus	RefSeq	ILMN_249469	ILMN_314181	LOC100044292	XM_001471563.1	XM_001471563.1		100044292	149258650	XM_001471563.1	LOC100044292	XP_001471613.1	ILMN_3161892	002970411	S	851	CATACCACAGACTTTCTCACCCGTGTTGGAGAAGCACATCAGGGCTTCCC					PREDICTED: Mus musculus hypothetical protein LOC100044292 (LOC100044292), mRNA.					
Mus musculus	RefSeq	ILMN_218081	ILMN_218081	CYP26A1	NM_007811.1	NM_007811.1		13082	6681100	NM_007811.1	Cyp26a1	NP_031837.1	ILMN_2957054	001990551	S	1338	TCCCGGTTCAGCTTCATTCCATTTGGAGGAGGCCTTCGGAGCTGTGTAGG	19	+	37775629-37775678	19qC2	Mus musculus cytochrome P450, family 26, subfamily a, polypeptide 1 (Cyp26a1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IGI]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IGI]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	RAH; P450RA; MGC13860; Cyp26; P450RAI	RAH; P450RA; MGC13860; Cyp26; P450RAI
Mus musculus	RefSeq	ILMN_218081	ILMN_218081	CYP26A1	NM_007811.1	NM_007811.1		13082	6681100	NM_007811.1	Cyp26a1	NP_031837.1	ILMN_2691295	003870056	S	51	CGTGCCATGGGGCTCCCGGCGCTGCTGGCCAGTGCGCTCTGCACCTTCGT	19	+	37772394-37772399:37772400-37772443	19qC2	Mus musculus cytochrome P450, family 26, subfamily a, polypeptide 1 (Cyp26a1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IGI]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IGI]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	RAH; P450RA; MGC13860; Cyp26; P450RAI	RAH; P450RA; MGC13860; Cyp26; P450RAI
Mus musculus	RefSeq	ILMN_216671	ILMN_216671	MSRA	NM_026322.3	NM_026322.3		110265	60097936	NM_026322.3	Msra	NP_080598.2	ILMN_1227857	002230204	S	1762	CTCTGCAGAGAAAAGACAGGAGTGACCTTAATGAATTCTAACATTCTGCT	14	-	64741510-64741559	14qD1	Mus musculus methionine sulfoxide reductase A (Msra), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin [goid 8113] [evidence IMP]; Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide [goid 16671] [evidence IEA]	2310045J23Rik; MSR-A; 6530413P12Rik; MGC101976	2310045J23Rik; MSR-A; 6530413P12Rik; MGC101976
Mus musculus	MEEBO	ILMN_216656	ILMN_216656	B830045N13RIK	scl17382.11.1_35	NM_153539.1			23956303	NM_153539.1	B830045N13Rik		ILMN_2673721	006620066	S	2391	CAAGCACAACCCAAAATCTTGAAGGAGTTTTTACAGTGCTTTTGTGGAAG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	Riken	ILMN_205996	ILMN_205996	D830015B12RIK	ri|D830015B12|PX00199O03|AK052871|1251					AK052871	D830015B12Rik		ILMN_1234367	007100743	S	463	GATACCGCTTCCACAAAAGCTTGCCAGAGGAAAGGCTGAGCTGCCTGATC										
Mus musculus	RefSeq	ILMN_212960	ILMN_212960	EIF2C4	NM_153177.2	NM_153177.2		76850	68448546	NM_153177.2	Eif2c4	NP_694817.2	ILMN_1246761	003460253	S	2461	CCGGCTTGTGGCATTCCGGGCAAGGTATCATTTGGTGGATAAAGATCATG	4	-	126173996-126174045	4qD2.2	Mus musculus eukaryotic translation initiation factor 2C, 4 (Eif2c4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI481660; Ago4; 5730550L01Rik	AI481660; Ago4; 5730550L01Rik
Mus musculus	RefSeq	ILMN_212960	ILMN_212960	EIF2C4	NM_153177.2	NM_153177.2		76850	68448546	NM_153177.2	Eif2c4	NP_694817.2	ILMN_1219109	002760706	S	2432	GTCTCCATTCCTGCCCCTGCATATTATGCCCGGCTTGTGGCATTCCGGGC	4	-	126174025-126174074	4qD2.2	Mus musculus eukaryotic translation initiation factor 2C, 4 (Eif2c4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI481660; Ago4; 5730550L01Rik	AI481660; Ago4; 5730550L01Rik
Mus musculus	RefSeq	ILMN_196385	ILMN_196385	1500009K05RIK	XM_146924.1	XM_146924.1			20891066	XM_146924.1	1500009K05Rik		ILMN_1251365	000360129	S	1939	TATGACACCAGAGAGGAAGGCAGTGGAGCTAGAAGCAGGGAGAGGGAGTC										
Mus musculus	RefSeq	ILMN_212082	ILMN_212082	1700029P11RIK	NM_025503.1	NM_025503.1		66346	13384923	NM_025503.1	1700029P11Rik	NP_079779.1	ILMN_3046125	004780102	I	911	CCCAAGGAAGGCGTGGCTTTCTCCGTATTTCTTCTGGAATCGGCCTGGAT	15	+	81808710-81808759	15qE1	Mus musculus RIKEN cDNA 1700029P11 gene (1700029P11Rik), mRNA.			Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212082	ILMN_212082	1700029P11RIK	NM_025503.1	NM_025503.1		66346	13384923	NM_025503.1	1700029P11Rik	NP_079779.1	ILMN_3121687	001340154	A	333	TGCCAAACTATAAGATGATCGAGTGGGCCCGCCGGGAAGCTGCGATGCTG	15	+	81808132-81808181	15qE1	Mus musculus RIKEN cDNA 1700029P11 gene (1700029P11Rik), mRNA.			Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192711	ILMN_192711	NEF3	scl2689.1.1_165				6679047	NM_008691	Nef3		ILMN_2632416	000010195	S	2351	AGTGGTGGTCACCAAGAAGGTAGAAAAGATCACCAGCGAGGGAGGCGATG										
Mus musculus	MEEBO	ILMN_192711	ILMN_192711	NEF3	scl2689.1.1_165				6679047	NM_008691	Nef3		ILMN_1225279	005810735	S	2352	GTGGTGGTCACCAAGAAGGTAGAAAAGATCACCAGCGAGGGAGGCGATGG										
Mus musculus	MEEBO	ILMN_223738	ILMN_223738	B530002L08	scl0329160.5_25				51705012	XM_488895	B530002L08		ILMN_1214537	006580730	S	2270	CATCTAGGATAGAGTTATGATATGAGACTGTGTGCACTTGTGTATTGTGG										
Mus musculus	RefSeq	ILMN_221692	ILMN_319585	LOC100047260	XM_001477752.1	XM_001477752.1		100047260	149233749	XM_001477752.1	LOC100047260	XP_001477802.1	ILMN_2739156	001990537	S	2689	CAGCATCTCAGAACAGGGTGCTTCCCTCTGCCTCCAGCTCCAAGGACTCT					PREDICTED: Mus musculus similar to heparan sulfate 6-sulfotransferase 1 (LOC100047260), mRNA.					
Mus musculus	RefSeq	ILMN_213411	ILMN_213411	1700065D16RIK	NM_028533.2	NM_028533.2		73410	34328315	NM_028533.2	1700065D16Rik	NP_082809.2	ILMN_2636814	000060746	S	2193	CGTAAGGCTGATTCTATTTTCATCTCCCATTCAGTCCTAACCCAGTATTT	9	-	95756497-95756546	9qE3.3	Mus musculus RIKEN cDNA 1700065D16 gene (1700065D16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194008	ILMN_249318	BC023892	XM_994662.1	XM_994662.1		212943	94386274	XM_994662.1	BC023892	XP_999756.2	ILMN_1242130	000160202	S	1955	GCCTTGCCTATCACACGAGGAGGTCAGAAAGTAACAGGGGAAAGCAGGGC	9	-	85217520-85217569	9qE3.1	PREDICTED: Mus musculus cDNA sequence BC023892, transcript variant 2 (BC023892), mRNA.					
Mus musculus	RefSeq	ILMN_194008	ILMN_249318	BC023892	XM_994662.1	XM_994662.1		212943	94386274	XM_994662.1	BC023892	XP_999756.2	ILMN_2502471	006480554	S	4457	GCCCACGGTTTGTTTGCTCTTGTGTTTGTCTGGCCTAGTGTACTGTTACT	9	-	85215018-85215067	9qE3.1	PREDICTED: Mus musculus cDNA sequence BC023892, transcript variant 2 (BC023892), mRNA.					
Mus musculus	RefSeq	ILMN_211436	ILMN_211436	SCP2	NM_011327.1	NM_011327.1		20280	45476580	NM_011327.1	Scp2	NP_035457.1	ILMN_2705881	006100408	S	1437	CAAAGTGAAAGATGGCCCTGGAGGCAAAGAAGCTACCTGGGTGGTGGATG	4	-	107553406-107553455	4qC7	Mus musculus sterol carrier protein 2, liver (Scp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IMP]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA];  [goid 5498] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA];  [goid 4770] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA + propanoyl-CoA = CoA + 3alpha,7alpha,12alpha-trihydroxy-24-oxo-5beta-cholestanoyl-CoA [goid 33814] [evidence IEA]	C76618; SCP-2; ns-LTP; SCPx; NSL-TP; C79031; AA409893; AA409774	C76618; SCP-2; ns-LTP; SCPx; NSL-TP; C79031; AA409893; AA409774
Mus musculus	RefSeq	ILMN_209017	ILMN_209017	TMEM49	NM_029478.2	NM_029478.2		75909	27753990	NM_029478.2	Tmem49	NP_083754.2	ILMN_2591781	004210228	S	2458	CGTGGTCGTGACATCGCATGGCTGTACCACCTTGTCGGATAGCTTATCAG	11	-	86400325-86400374	11qC	Mus musculus transmembrane protein 49 (Tmem49), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			3110098I04Rik; ni-2; 4930579A11Rik; AI787464	3110098I04Rik; ni-2; 4930579A11Rik; AI787464
Mus musculus	RefSeq	ILMN_209017	ILMN_209017	TMEM49	NM_029478.2	NM_029478.2		75909	27753990	NM_029478.2	Tmem49	NP_083754.2	ILMN_2861787	002340113	S	2365	GCTTTCTTTCCTAGAATTGGCATTAAGCCCCAGCAAACCAGAGATGTTTG	11	-	86400418-86400467	11qC	Mus musculus transmembrane protein 49 (Tmem49), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			3110098I04Rik; ni-2; 4930579A11Rik; AI787464	3110098I04Rik; ni-2; 4930579A11Rik; AI787464
Mus musculus	MEEBO	ILMN_192604	ILMN_192604	NPAT	scl36947.19_123				51764867	XM_146900	Npat		ILMN_2489614	003840132	S	19	CATTTTGATTTGTTTCTTGAGATGGTACCTATGTAGTTCTTGTTGACCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]			
Mus musculus	MEEBO	ILMN_192604	ILMN_192604	NPAT	scl36947.19_123				51764867	XM_146900	Npat		ILMN_2646503	006840196	S	4185	AAACGGAAAATTGAGGAATTAGATGAGTGTGAGAGAAACTCCCGCACGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]			
Mus musculus	MEEBO	ILMN_192604	ILMN_192604	NPAT	scl36947.19_123				51764867	XM_146900	Npat		ILMN_2646504	007210088	S	4186	AACGGAAAATTGAGGAATTAGATGAGTGTGAGAGAAACTCCCGCACGTCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]			
Mus musculus	RefSeq	ILMN_254115	ILMN_254115	NYX	NM_173415.2	NM_173415.2		236690	34328398	NM_173415.2	Nyx	NP_775591.1	ILMN_3090954	003460494	A	3263	CTGCTACAAGGCCACGTTTCTCTTCACCTCTTGCGTCTTGCTCAGCCTGG	X	+	12644349-12644398	XqA1.1	Mus musculus nyctalopin (Nyx), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	nob; MGC38926; CSNB4; CSNB1; CLNP	nob; MGC38926; CSNB4; CSNB1; CLNP
Mus musculus	RefSeq	ILMN_203353	ILMN_316523	LOC100046469	XM_001476518.1	XM_001476518.1		100046469	149266976	XM_001476518.1	LOC100046469	XP_001476568.1	ILMN_1256128	006560431	S	2530	TTCCCAGGAGTTCCAAGATGTGGTGCGGGCCTTTTATAGCACCCTGGATG					PREDICTED: Mus musculus similar to Plec1 protein, transcript variant 1 (LOC100046469), mRNA.					
Mus musculus	RefSeq	ILMN_203817	ILMN_316523	LOC100046469	XM_001476518.1	XM_001476518.1		100046469	149266976	XM_001476518.1	LOC100046469	XP_001476568.1	ILMN_1224733	000610152	S	2121	TTTCCCTGTTAGAAGCAGAAGAGGCCCTGGATGAGGACACTGGGGGCGAG					PREDICTED: Mus musculus similar to Plec1 protein, transcript variant 1 (LOC100046469), mRNA.					
Mus musculus	RefSeq	ILMN_197753	ILMN_316523	LOC100046469	XM_001476518.1	XM_001476518.1		100046469	149266976	XM_001476518.1	LOC100046469	XP_001476568.1	ILMN_1231650	003850324	S	3202	TGTCTTTGGCTGGATAGACAGGATGACTGTGGACTGGGGAGGGCCAGACC					PREDICTED: Mus musculus similar to Plec1 protein, transcript variant 1 (LOC100046469), mRNA.					
Mus musculus	RefSeq	ILMN_203635	ILMN_316523	LOC100046469	XM_001476518.1	XM_001476518.1		100046469	149266976	XM_001476518.1	LOC100046469	XP_001476568.1	ILMN_2558806	000360148	S	1727	AGCGCCACCCTGGACATAGACCCTGAAAGGACAGATCCCACTGAGGCCCT					PREDICTED: Mus musculus similar to Plec1 protein, transcript variant 1 (LOC100046469), mRNA.					
Mus musculus	RefSeq	ILMN_219017	ILMN_219017	CEACAM9	NM_011927.3	NM_011927.3		26368	146134352	NM_011927.3	Ceacam9	NP_036057.1	ILMN_2703161	003420008	S	563	CCGCTGGCTCTTCAATCACCAGGGCCTGTATTTCAATGACAGGATGACTC				7qA2	Mus musculus CEA-related cell adhesion molecule 9 (Ceacam9), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		AW545709; mmCGM8; Cea-5; AA410097; Cea5	AW545709; mmCGM8; Cea-5; AA410097; Cea5
Mus musculus	Riken	ILMN_203907	ILMN_203907	ASPA	ri|9630017E19|PX00115H19|AK035910|4172					AK035910	Aspa		ILMN_1214573	000780180	S	4033	GGAGAAGATGCACATAATCCTGAAGAGACAGGATGCCCGCACACACCCTC							The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving acetate, the anion of acetic acid [goid 6083] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid [goid 4046] [evidence TAS]; Catalysis of the reaction: N-acyl-L-aspartate + H2O = a fatty acid anion + L-aspartate [goid 19807] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217099	ILMN_217099	NOLA2	NM_026631.1	NM_026631.1		52530	13386119	NM_026631.1	Nola2	NP_080907.1	ILMN_2880634	004610020	S	778	TTCAGCACAGAGCCTCAAGGGTGTACCTGGCAAATGTTCTGCACTGGCTC	11	+	51466911-51466960	11qB1.3	Mus musculus nucleolar protein family A, member 2 (Nola2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Nhp2; D11Ertd175e; 2410130M07Rik	Nhp2; D11Ertd175e; 2410130M07Rik
Mus musculus	RefSeq	ILMN_224008	ILMN_239891	CAPG	NM_007599.3	NM_007599.3		12332	142354781	NM_007599.3	Capg	NP_031625.2	ILMN_2773113	000020064	S	1028	GGAGATACTGCCCCAGGGCCGAGAGAGTCCCATCTTCAAGCAATTCTTCA	6	+	72512806-72512855	6qC1	Mus musculus capping protein (actin filament), gelsolin-like (Capg), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	mbh1; gCap39	mbh1; gCap39
Mus musculus	RefSeq	ILMN_219124	ILMN_219124	EIF3H	NM_080635.1	NM_080635.1		68135	18079340	NM_080635.1	Eif3h	NP_542366.1	ILMN_1215703	006250484	S	762	GAGCCAGGACATAATCAAATACAACACGTACATGCGCAACACCAGTAAGC	15	-	51621559-51621608	15qC	Mus musculus eukaryotic translation initiation factor 3, subunit H (Eif3h), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	EIF3-P40; MGC107627; EIF3-gamma; Eif3s3; 9430017H16Rik; 40kD; 1110008A16Rik	EIF3-P40; MGC107627; EIF3-gamma; Eif3s3; 9430017H16Rik; 40kD; 1110008A16Rik
Mus musculus	MEEBO	ILMN_185456	ILMN_185456	TRIM41	scl40289.5_205	NM_145377.1			21703755	NM_145377.1	Trim41		ILMN_1260252	002970278	S	5	CCTTCCACCCCCCAATTTCTACCTCCATAGACTGGCCAGAATTTAGCTTC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219063	ILMN_219063	CCDC53	NM_026070.2	NM_026070.2		67282	141802694	NM_026070.2	Ccdc53	NP_080346.1	ILMN_1244642	006380059	S	514	GCGCCATCAGAAAATGTCCTGACCGTAGCCAAGGATCCACGGTATGCCAG	10	+	87682035-87682084	10qC1	Mus musculus coiled-coil domain containing 53 (Ccdc53), mRNA.				2900091E11Rik; 5730495F03Rik	2900091E11Rik; 5730495F03Rik
Mus musculus	RefSeq	ILMN_219063	ILMN_219063	CCDC53	NM_026070.2	NM_026070.2		67282	141802694	NM_026070.2	Ccdc53	NP_080346.1	ILMN_2744592	007100010	S	661	GCCCCGGTGCCAAATGGCGAAAGCGAAAGAGCCGTAGAAGAAAGTTCAGA	10	+	87708512-87708561	10qC1	Mus musculus coiled-coil domain containing 53 (Ccdc53), mRNA.				2900091E11Rik; 5730495F03Rik	2900091E11Rik; 5730495F03Rik
Mus musculus	RefSeq	ILMN_220354	ILMN_220354	POLD3	NM_133692.2	NM_133692.2		67967	141802038	NM_133692.2	Pold3	NP_598453.1	ILMN_2720995	004250138	S	2740	CGAGAACTGGAGGGCAGATGCTTGTCCATCAAGCTGAGTAAAGGTTGGTG	7	-	107230835-107230884	7qE2	Mus musculus polymerase (DNA-directed), delta 3, accessory subunit (Pold3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	C85233; P66; 2410142G14Rik; P68	C85233; P66; 2410142G14Rik; P68
Mus musculus	RefSeq	ILMN_184266	ILMN_233165	OMP	NM_011010.2	NM_011010.2		18378	55926142	NM_011010.2	Omp	NP_035140.1	ILMN_2760399	003780220	S	358	AAGACTCCGACGCCATGGATTGGAATGAGGCAGACGCCCTGGAGTTTGGG	7	-	105293550-105293599	7qE2	Mus musculus olfactory marker protein (Omp), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_184266	ILMN_233165	OMP	NM_011010.2	NM_011010.2		18378	55926142	NM_011010.2	Omp	NP_035140.1	ILMN_2417234	001770475	S	2023	CCGTCTGCCCTGTGGGGACATGAGTGTCTCTGTTGTGCCTGTTTCACAAT	7	-	105291885-105291934	7qE2	Mus musculus olfactory marker protein (Omp), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_192612	ILMN_257268	TADA3L	NM_133932.2	NM_133932.2		101206	118129897	NM_133932.2	Tada3l	NP_598693.1	ILMN_2684455	007100220	S	1373	GTCCGCATGGCCGACAACGAAGTCATGGATGCCTTCCGGAAGATCATGGC	6	-	113317081-113317130	6qE3	Mus musculus transcriptional adaptor 3 (NGG1 homolog, yeast)-like (Tada3l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 30374] [evidence IDA]	AI987856; 1110004B19Rik; ADA3	AI987856; 1110004B19Rik; ADA3
Mus musculus	RefSeq	ILMN_192612	ILMN_257268	TADA3L	NM_133932.2	NM_133932.2		101206	118129897	NM_133932.2	Tada3l	NP_598693.1	ILMN_2656604	004180603	S	90	GATCTTGGGGCGACACACAGGTGGAGCCAGCCATTAAGCAGTCCCACTTC	6	-	113327375-113327424	6qE3	Mus musculus transcriptional adaptor 3 (NGG1 homolog, yeast)-like (Tada3l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 30374] [evidence IDA]	AI987856; 1110004B19Rik; ADA3	AI987856; 1110004B19Rik; ADA3
Mus musculus	Riken	ILMN_205892	ILMN_205892	A730094C16RIK	ri|A730094C16|PX00153C02|AK043415|3058					AK043415	A730094C16Rik		ILMN_1243062	005310546	S	2802	CCAACATGGGTTCAGGCCTCTGGGGGAGAGGCAGCCGTTAGGATAGCTTT										
Mus musculus	Riken	ILMN_203742	ILMN_203742	9930010D11RIK	ri|9930010D11|PX00119L22|AK036788|2989					AK036788	9930010D11Rik		ILMN_2559632	002750440	S	2449	CTCTTCCTTTGTAGGTGGGACCCTGATGCTTTAAGAGCTGCAGCCATGAG										
Mus musculus	Riken	ILMN_205483	ILMN_205483	D030049N18RIK	ri|D030049N18|PX00180F19|AK050983|1125					AK050983	D030049N18Rik		ILMN_1249744	005340372	S	946	GTTAGCTGCAACAACACCCCAGTGGTGGAGGACACCAAGCAACAGGAGAG										
Mus musculus	RefSeq	ILMN_213353	ILMN_213353	SH3BGRL	NM_019989.2	NM_019989.2		56726	31543698	NM_019989.2	Sh3bgrl	NP_064373.1	ILMN_2636212	003170129	S	2202	TTGCATTGGAGGATGTTTATGTCTGTGGGATAATACCCTGAAGTCTGTAG	X	+	106357172-106357221	XqD	Mus musculus SH3-binding domain glutamic acid-rich protein like (Sh3bgrl), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1190008F14Rik	1190008F14Rik
Mus musculus	MEEBO	ILMN_187445	ILMN_187445	4930579E17RIK	scl43275.14_277				31340876	NM_178629	4930579E17Rik		ILMN_2444201	001070424	S	10	GGCGGCCTTGCTAAATCAAGATTTCATTCCCTTTCATTCCTATTGGCCAT							The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187445	ILMN_187445	4930579E17RIK	scl43275.14_277				31340876	NM_178629	4930579E17Rik		ILMN_2654720	000940612	S	789	TCACTGGACCGTGCCAAGCATAGGGCAAGCGAAATGCCCCAGGCTTTTCT							The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	Riken	ILMN_202745	ILMN_202745	E130301L11RIK	ri|E130301L11|PX00092N21|AK021408|716					AK021408	E130301L11Rik		ILMN_1232740	002940192	S	597	GCCTGGCATGGTGGTTCATGCCTCTAATCCCAGCACTTTAGGAGGCAGAG										
Mus musculus	RefSeq	ILMN_221905	ILMN_221905	ROD1	NM_178164.2	NM_178164.2		230257	142389023	NM_178164.2	Rod1	NP_835458.1	ILMN_2741882	001500241	S	3421	GGCTTTTAAAATACAGAATTTGTCAGAGGAATCAATTTTGTCCACCCCTT	4	-	59488046-59488095	4qB3	Mus musculus ROD1 regulator of differentiation 1 (S. pombe) (Rod1), transcript variant 2, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	5830471K22Rik; C86549; AI462022; AW107884; MGC11742; AA407443	5830471K22Rik; C86549; AI462022; AW107884; MGC11742; AA407443
Mus musculus	RefSeq	ILMN_213087	ILMN_213087	1110057K04RIK	NM_172401.2	NM_172401.2		68832	31541805	NM_172401.2	1110057K04Rik	NP_765989.2	ILMN_2756686	000290296	S	2514	GGTCACTGGTGGGAATCAATGCATAAGAACAAGTCCTGGCAAGTCAGACC	12	+	8292358-8292407	12qA1.1	Mus musculus RIKEN cDNA 1110057K04 gene (1110057K04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213087	ILMN_213087	1110057K04RIK	NM_172401.2	NM_172401.2		68832	31541805	NM_172401.2	1110057K04Rik	NP_765989.2	ILMN_2633457	003360475	S	611	CCACTCCATTTTTGTGCCAGTTTCGATACCTGCTCTATGCTACCAGCTAC	12	+	8275237-8275286	12qA1.1	Mus musculus RIKEN cDNA 1110057K04 gene (1110057K04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213087	ILMN_213087	1110057K04RIK	NM_172401.2	NM_172401.2		68832	31541805	NM_172401.2	1110057K04Rik	NP_765989.2	ILMN_2967362	002230091	S	2409	GACAACACGAGGTCCTCCCTGGTGTCTGCACAAGGATGCCTCCTGCAGAG	12	+	8292253-8292302	12qA1.1	Mus musculus RIKEN cDNA 1110057K04 gene (1110057K04Rik), mRNA.					
Mus musculus	MEEBO	ILMN_219456	ILMN_219456	D030001E08	scl45687.6.1_303	NM_177816.2			31342945	NM_177816.2	D030001E08		ILMN_1217244	004250367	S	3005	ACATGTAGCATCTGTTATGCCCTCAAGTCTCTGATAACACCCTCCTCTTC										
Mus musculus	RefSeq	ILMN_213575	ILMN_213575	SFMBT1	NM_019460.1	NM_019460.1		54650	9507088	NM_019460.1	Sfmbt1	NP_062333.1	ILMN_1255592	001110170	S	1699	TTATCAACGCAGCATACAAACCCAGCCGCGTCCTCCGTGAGCTCCAGCTG	14	+	31623495-31623544	14qB	Mus musculus Scm-like with four mbt domains 1 (Sfmbt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]		Smr; DKFZp434L243; Sfmbt	Smr; DKFZp434L243; Sfmbt
Mus musculus	RefSeq	ILMN_213575	ILMN_213575	SFMBT1	NM_019460.1	NM_019460.1		54650	9507088	NM_019460.1	Sfmbt1	NP_062333.1	ILMN_2894251	001260139	S	2401	TAAGGATTGAAGTTGATGAAAGGCTTCACCTGGACAGTAACCCACTGAAG	14	+	31629938-31629987	14qB	Mus musculus Scm-like with four mbt domains 1 (Sfmbt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]		Smr; DKFZp434L243; Sfmbt	Smr; DKFZp434L243; Sfmbt
Mus musculus	RefSeq	ILMN_213575	ILMN_213575	SFMBT1	NM_019460.1	NM_019460.1		54650	9507088	NM_019460.1	Sfmbt1	NP_062333.1	ILMN_2894245	002350672	S	2461	CCGATGTCGTGCGGTTCATCAGGTCCACTGACTGTGCTCCGTTGGCAAGA	14	+	31629998-31630047	14qB	Mus musculus Scm-like with four mbt domains 1 (Sfmbt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]		Smr; DKFZp434L243; Sfmbt	Smr; DKFZp434L243; Sfmbt
Mus musculus	RefSeq	ILMN_196743	ILMN_196743	KLRA13	NM_010647.2	NM_010647.2		16631	31581537	NM_010647.2	Klra13	NP_034777.2	ILMN_1227717	000450445	S	333	GGCACTGATCTTCTGGAATCCCTCAACAAGGAACAGAACAGATGGTACCG	6	-	130253217-130253266	6qF3	Mus musculus killer cell lectin-like receptor subfamily A, member 13 (Klra13), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC123449; Ly49M	MGC123449; Ly49M
Mus musculus	RefSeq	ILMN_196743	ILMN_196743	KLRA13	NM_010647.2	NM_010647.2		16631	31581537	NM_010647.2	Klra13	NP_034777.2	ILMN_1230969	005550674	S	320	TAGAGTGTAGGCCAGGCACTGATCTTCTGGAATCCCTCAACAAGGAACAG	6	-	130253230-130253279	6qF3	Mus musculus killer cell lectin-like receptor subfamily A, member 13 (Klra13), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC123449; Ly49M	MGC123449; Ly49M
Mus musculus	RefSeq	ILMN_213547	ILMN_213547	X99384	NM_013753.1	NM_013753.1		27355	7305364	NM_013753.1	X99384	NP_038781.1	ILMN_1260372	006940068	S	3705	GACCCTCTTAGCTGAATTCTTTTGCAAGCTGCTGTATGTCTGTCCACGCC	10	-	60782692-60782741	10qB4	Mus musculus cDNA sequence X99384 (X99384), mRNA.				Pald; MMPAL; mKIAA1274	Pald; MMPAL; mKIAA1274
Mus musculus	RefSeq	ILMN_217355	ILMN_217355	LRRC26	NM_146117.1	NM_146117.1		227618	22122636	NM_146117.1	Lrrc26	NP_666229.1	ILMN_2682268	001470196	S	858	TTTCCTTGCTAGTTTGGCCATCTGCCTGGCATTGGGCTCCGTGCTCACTG	2	+	25146400-25146449	2qA3	Mus musculus leucine rich repeat containing 26 (Lrrc26), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC37548; MGC37592; MGC6965; RP23-132N23.19	MGC37548; MGC37592; MGC6965; RP23-132N23.19
Mus musculus	RefSeq	ILMN_201466	ILMN_236448	LOC671060	XM_984739.1	XM_984739.1		671060	94418246	XM_984739.1	LOC671060	XP_989833.1	ILMN_1228203	003990072	S	305	TGGAGCTCTGTGACACAAACTGGAGCAGTGTGACCGCACAAGTGGTGCAG					PREDICTED: Mus musculus hypothetical protein LOC671060 (LOC671060), mRNA.					
Mus musculus	RefSeq	ILMN_218346	ILMN_314001	D6ERTD474E	XR_035149.1	XR_035149.1		52285	149256015	XR_035149.1	D6Ertd474e		ILMN_2694615	006520296	S	542	CAGAAGAAATTCCCAGCAAAGTGACCTGTGTTGCAAGACTCAAAAGAGGG	6	+	143244185-143244234	6qG3	PREDICTED: Mus musculus DNA segment, Chr 6, ERATO Doi 474, expressed (D6Ertd474e), misc RNA.					
Mus musculus	Riken	ILMN_206588	ILMN_206588	D930002C23RIK	ri|D930002C23|PX00201A01|AK086067|1661					AK086067	D930002C23Rik		ILMN_1251166	004780661	S	1461	TCAGACAAGTGGCCAAAGTGGCACAAAAGGACCCTAAGTGCAGAGTCCCC										
Mus musculus	Riken	ILMN_203012	ILMN_203012	6030410I10RIK	ri|6030410I10|PX00056B15|AK031346|2195					AK031346	6030410I10Rik		ILMN_1216684	003890520	S	1727	TGATTCTTAGTGAAGGGGACTGGTTGGCAGCAGGAGGTCAACACTCAGGC										
Mus musculus	RefSeq	ILMN_204214	ILMN_246013	MARCH6	NM_172606.2	NM_172606.2		223455	71043941	NM_172606.2	March6	NP_766194.2	ILMN_1242799	007210379	S	2870	AGCGCCTGGTGAACTATGAGCGCAAATCCGGCAAGCAAGGCCCGTCTACA	15	-	31388970-31389019	15qB2	Mus musculus membrane-associated ring finger (C3HC4) 6 (March6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	F830029L24Rik; mKIAA0597; 3830408G03	F830029L24Rik; mKIAA0597; 3830408G03
Mus musculus	RefSeq	ILMN_189549	ILMN_246013	MARCH6	NM_172606.2	NM_172606.2		223455	71043941	NM_172606.2	March6	NP_766194.2	ILMN_2745741	000780338	S	4816	TGTCCTCGTGGGGATTTATTGTGCATAACATTTGCTAGGGTGACATACAG	15	-	31387024-31387073	15qB2	Mus musculus membrane-associated ring finger (C3HC4) 6 (March6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	F830029L24Rik; mKIAA0597; 3830408G03	F830029L24Rik; mKIAA0597; 3830408G03
Mus musculus	RefSeq	ILMN_203447	ILMN_246013	MARCH6	NM_172606.2	NM_172606.2		223455	71043941	NM_172606.2	March6	NP_766194.2	ILMN_1242572	004810372	S	2781	CGTTGTGCTGATGGGAATCCTGTCCTTCCAGGTCCGCCAGTTTAAGCGCC	15	-	31391721-31391770	15qB2	Mus musculus membrane-associated ring finger (C3HC4) 6 (March6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	F830029L24Rik; mKIAA0597; 3830408G03	F830029L24Rik; mKIAA0597; 3830408G03
Mus musculus	Riken	ILMN_205472	ILMN_205472	A630077M18RIK	ri|A630077M18|PX00147P22|AK042275|967					AK042275	A630077M18Rik		ILMN_1224757	005050180	S	893	CACGGGGCACGCACCTGTGCCACCATCACCTACAGCAATAAAAACAGGTC										
Mus musculus	RefSeq	ILMN_188924	ILMN_234743	FAM110B	NM_173426.2	NM_173426.2		242297	141802222	NM_173426.2	Fam110b	NP_775602.1	ILMN_1239592	005890719	S	1762	GGTGGGTCTGTCTGTGCATACACAGTTGTGAAGGTTGTGAGGTCTCCTTG	4	+	5726858-5726907	4qA1	Mus musculus family with sequence similarity 110, member B (Fam110b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			5031405P22; RP23-322G17.1; AW049855	5031405P22; RP23-322G17.1; AW049855
Mus musculus	Riken	ILMN_206906	ILMN_206906	CCND2	ri|5330440O09|PX00055A11|AK077367|3506					AK077367	Ccnd2		ILMN_1225932	006770286	S	3295	TGGTGCCAGAGGACGAGTTTGTGCTCACATTGCCCTGGAAGAAGGAAGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_187583	ILMN_320563	VPS13D	XM_001476900.1	XM_001476900.1		230895	149253287	XM_001476900.1	Vps13d	XP_001476950.1	ILMN_1230695	006220446	S	13093	CTCCAAAGACCATGGGAAGGTGTATGTGCAAGTAACTAAGAAAGCTGCAA	4	-	144566480-144566529	4qE1	PREDICTED: Mus musculus vacuolar protein sorting 13 D (yeast) (Vps13d), mRNA.					
Mus musculus	RefSeq	ILMN_251922	ILMN_251922	C030018G13RIK	NM_175510.2	NM_175510.2		241076	31342054	NM_175510.2	C030018G13Rik	NP_780719.1	ILMN_2950828	007570661	S	920	TCGATGGAAGCCTGTCCTCCCAAACGTCCCAGGAAAGAGGCCCGTCACAT	1	+	66424285-66424334	1qC3	Mus musculus RIKEN cDNA C030018G13 gene (C030018G13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222049	ILMN_233079	4930572D21RIK	XM_911732.2	XM_911732.2		78052	94379573	XM_911732.2	4930572D21Rik	XP_916825.1	ILMN_2743871	005360669	S	442	CGGCCAACAAGTCAACTACCGTTCTCCAATCCCCAGGAGGCGAAGTAGAA				7qA1	PREDICTED: Mus musculus RIKEN cDNA 4930572D21 gene (4930572D21Rik), mRNA.					
Mus musculus	Riken	ILMN_202277	ILMN_202277	1700094G20RIK	ri|1700094G20|ZX00077A18|AK007064|1198					AK007064	1700094G20Rik		ILMN_1224328	001410128	S	944	AGGCTAACAGTATAAGATGTGCACCTCAGATGGCAAGCTCTGATCTGAGC										
Mus musculus	RefSeq	ILMN_193235	ILMN_193235	TMEM25	NM_027865.1	NM_027865.1		71687	21313686	NM_027865.1	Tmem25	NP_082141.1	ILMN_2789294	002350259	S	2227	AGCAACCTGAAAACGACTGGCGACCATCAGAGTGCGGCGTCTATTCTCCC	9	-	44544851-44544900	9qA5.2	Mus musculus transmembrane protein 25 (Tmem25), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610039J01Rik; AI429491	0610039J01Rik; AI429491
Mus musculus	RefSeq	ILMN_193235	ILMN_193235	TMEM25	NM_027865.1	NM_027865.1		71687	21313686	NM_027865.1	Tmem25	NP_082141.1	ILMN_2506076	006040187	S	16	GTGGCTGGAGGACTTGCCTTGGGCACTCTAGTGGGGTTCAGTACCTTGGT	9	-	44549723-44549728:44549729-44549752:44550176-44550195	9qA5.2	Mus musculus transmembrane protein 25 (Tmem25), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610039J01Rik; AI429491	0610039J01Rik; AI429491
Mus musculus	RefSeq	ILMN_193235	ILMN_193235	TMEM25	NM_027865.1	NM_027865.1		71687	21313686	NM_027865.1	Tmem25	NP_082141.1	ILMN_2506077	003060022	S	17	TGGCTGGAGGACTTGCCTTGGGCACTCTAGTGGGGTTCAGTACCTTGGTG	9	-	44549722-44549728:44549729-44549752:44550176-44550194	9qA5.2	Mus musculus transmembrane protein 25 (Tmem25), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610039J01Rik; AI429491	0610039J01Rik; AI429491
Mus musculus	RefSeq	ILMN_201553	ILMN_318926	LOC100042481	XM_001477627.1	XM_001477627.1		100042481	149273327	XM_001477627.1	LOC100042481	XP_001477677.1	ILMN_1228194	006520546	S	113	CCCCAACTTGTTCCTCAAGCTTTTGTGCCCTGGTCTGTATCAAAAGACAG	Y|NT_166358.1	+	74884-74933		PREDICTED: Mus musculus similar to spermiogenesis specific transcript on the Y 1 (LOC100042481), mRNA.					
Mus musculus	MEEBO	ILMN_209631	ILMN_209631	B430209F14RIK	scl47542.1.33_139	NM_177188.2			31343015	NM_177188.2	B430209F14Rik		ILMN_1256224	003360736	S	4789	TAAAATTTAAATAATTGTTCTAGAAGTTGGTATGGAAATGGTAGGCGCAG										
Mus musculus	Riken	ILMN_203633	ILMN_203633	E430031D18RIK	ri|E430031D18|PX00101L19|AK088915|864					AK088915	E430031D18Rik		ILMN_1227976	004830735	S	533	AGGGCCTTCGGGATGCCTCTGTCTGGTTATTGCCCTGTAGTGCCAGAGAG										
Mus musculus	RefSeq	ILMN_210585	ILMN_210585	SCRT1	NM_130893.3	NM_130893.3		170729	126722996	NM_130893.3	Scrt1	NP_570963.1	ILMN_2607114	006370441	S	3643	CCCCATAACTAAGCAGCACAATAACCGACTTAGCGAATTCAGGTAGAAGG	15	-	76346950-76346999	15qD3	Mus musculus scratch homolog 1, zinc finger protein (Drosophila) (Scrt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223302	ILMN_223302	IER3	NM_133662.2	NM_133662.2		15937	118130957	NM_133662.2	Ier3	NP_598423.1	ILMN_1216764	006520075	S	1024	GGGCGGCTGTCTGGGGTCGCCTAGTATGTATGTTCTGTGAACACGAATAA	17	+	35959790-35959839	17qB1	Mus musculus immediate early response 3 (Ier3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI663993; cI-3; gly96; IEX-1	AI663993; cI-3; gly96; IEX-1
Mus musculus	RefSeq	ILMN_198539	ILMN_198539	LOC278181	XM_205276.1	XM_205276.1		278181	25030959	XM_205276.1	LOC278181	XP_205276.1	ILMN_2532046	002320592	S	2347	AGAGGCCTTGCAGAGGAGGGTCATTCAGTCAAGGGCAGTAGCAGTACATC	X	+	16781875-16781924	XqA1.2	PREDICTED: Mus musculus similar to MORF-related gene X (LOC278181), mRNA.					
Mus musculus	RefSeq	ILMN_218529	ILMN_218529	PPM1F	NM_176833.3	NM_176833.3		68606	141802638	NM_176833.3	Ppm1f	NP_789803.1	ILMN_1221199	000870519	S	4706	GAGCTCATAGGACGTCTTCCCATGGGGCCCTGTACTGGTGTCAATAAACC	16	+	16927394-16927443	16qA3	Mus musculus protein phosphatase 1F (PP2C domain containing) (Ppm1f), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]	4933427B07Rik; CaMKPase; 1110021B16Rik; mKIAA0015; MGC25978	4933427B07Rik; CaMKPase; 1110021B16Rik; mKIAA0015; MGC25978
Mus musculus	RefSeq	ILMN_214025	ILMN_211466	SOX11	NM_009234.5	NM_009234.5		20666	62414090	NM_009234.5	Sox11	NP_033260.4	ILMN_2643394	004830286	S	4290	CCAGTGAACTCTATTGAATGTCTAATACACAAGGTATTCCAGCTACTGGC	12	-	28023238-28023287	12qA2	Mus musculus SRY-box containing gene 11 (Sox11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence ISO]	AI836553; 1110038H03Rik; end1; 6230403H02Rik	AI836553; 1110038H03Rik; end1; 6230403H02Rik
Mus musculus	RefSeq	ILMN_202084	ILMN_211466	SOX11	NM_009234.5	NM_009234.5		20666	62414090	NM_009234.5	Sox11	NP_033260.4	ILMN_1235647	001240753	S	7325	CAGTGGCTTGTGCTTTGTGCTTCAATCAAACCAGCTTCGTGACCGCCCTC	12	-	28020203-28020252	12qA2	Mus musculus SRY-box containing gene 11 (Sox11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence ISO]	AI836553; 1110038H03Rik; end1; 6230403H02Rik	AI836553; 1110038H03Rik; end1; 6230403H02Rik
Mus musculus	RefSeq	ILMN_219320	ILMN_219320	HHATL	NM_029095.1	NM_029095.1		74770	21312881	NM_029095.1	Hhatl	NP_083371.1	ILMN_2707207	001940132	S	1529	CCCAGACCACACTGGCGGTCTTGTTTGTCACCTACTGTGGTGTCCAGCTG	9	-	121693302-121693351	9qF4	Mus musculus hedgehog acyltransferase-like (Hhatl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process that decreases the rate frequency or extent of the covalent or non-covalent attachment of a palmitoyl moiety to the N-terminal amino acid residue of a protein [goid 60262] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gup1; 1110011D13Rik	Gup1; 1110011D13Rik
Mus musculus	RefSeq	ILMN_196401	ILMN_196401	1700016A15RIK	XM_127067.4	XM_127067.4			38049461	XM_127067.4	1700016A15Rik		ILMN_1248577	002900253	S	2162	GACCTCAAACCAGTGAAGGATGCCCTAGTCCTACCTGGCAGAAGATGATG										
Mus musculus	RefSeq	ILMN_184413	ILMN_184413	ZMAT3	NM_009517.2	NM_009517.2		22401	101943565	NM_009517.2	Zmat3	NP_033543.2	ILMN_2418426	007040711	S	7320	CAGGAAGCCGAGAGAATGTGAACCTTTCACGTGATCAGTGTGGCAAACCG	3	-	32234128-32234177	3qA3	Mus musculus zinc finger matrin type 3 (Zmat3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Wig1	Wig1
Mus musculus	MEEBO	ILMN_214564	ILMN_214564	NDUFA3	scl33146.4.49_0				21539586	NM_025348	Ndufa3		ILMN_2772241	004830187	S	199	AGAGATGACGGGAACATGCCTGATGTGCCCAGCCACCCTCAGGATCCTCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210595	ILMN_210595	TAS2R121	NM_207024.1	NM_207024.1		387349	46309596	NM_207024.1	Tas2r121	NP_996907.1	ILMN_2607229	002350201	S	784	GGTCTTATGTTTAGCATAACTGTTGGGCTTTTCTACCCTTCAAGCCACTC	6	-	132650192-132650241	6qG1	Mus musculus taste receptor, type 2, member 121 (Tas2r121), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	T2R21; MGC129521; mT2r48; mGR21; MGC129520; Tas2r21	T2R21; MGC129521; mT2r48; mGR21; MGC129520; Tas2r21
Mus musculus	RefSeq	ILMN_199513	ILMN_230952	LOC546551	XM_621300.3	XM_621300.3		546551	94393635	XM_621300.3	LOC546551	XP_621300.3	ILMN_1252000	003990368	S	91	GAGGATCCCGATAGAGAAAATGCTCGCAGGACACTGCAGCAAACAGGAAC					PREDICTED: Mus musculus similar to myelin basic protein expression factor 2, repressor (LOC546551), mRNA.					
Mus musculus	RefSeq	ILMN_187782	ILMN_229293	1810013L24RIK	XM_978218.1	XM_978218.1		69053	94400041	XM_978218.1	1810013L24Rik	XP_983312.1	ILMN_2447068	006200706	S	9923	ACTTGTTTTTTACTCTTCGGAGTTTCAATGAGTGATTAAATCATCCTGAG	16	+	8768129-8768178	16qA1	PREDICTED: Mus musculus RIKEN cDNA 1810013L24 gene, transcript variant 2 (1810013L24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212516	ILMN_212516	GABRG1	NM_010252.4	NM_010252.4		14405	141801939	NM_010252.4	Gabrg1	NP_034382.2	ILMN_2627367	001510398	S	4579	CCCAGAACATTATTTTGAACAGTTATGTCGCCCTCACCCATCTGAATGCA	5	-	71142428-71142477	5qC3.1	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 1 (Gabrg1), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]	GabaA/BZ; GabaA; MGC107399	GabaA/BZ; GabaA; MGC107399
Mus musculus	RefSeq	ILMN_199160	ILMN_199160	LOC237877	XM_111221.4	XM_111221.4			38091513	XM_111221.4	LOC237877		ILMN_2534259	007150431	S	4451	CCCGTCTCAAGCTCCTTCAGTACTTACAGGTATTTGCTACCACACTGAGC										
Mus musculus	RefSeq	ILMN_217932	ILMN_217932	ACADL	NM_007381.2	NM_007381.2		11363	31982519	NM_007381.2	Acadl	NP_031407.2	ILMN_2783519	005860452	S	1732	GCTCCATATTCCCCCAGGACATTGGTTCCCACCATGTTACCCCCAACCCC	1	-	66764171-66764220	1qC3	Mus musculus acyl-Coenzyme A dehydrogenase, long-chain (Acadl), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: acyl-CoA + ETF = 2,3-dehydroacyl-CoA + reduced ETF [goid 4466] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	AA960361; LCAD; C79855; AU018452	AA960361; LCAD; C79855; AU018452
Mus musculus	RefSeq	ILMN_221971	ILMN_221971	GPR34	NM_011823.4	NM_011823.4		23890	154091029	NM_011823.4	Gpr34	NP_035953.3	ILMN_2742840	007510333	S	1356	GTCCGTGACAGTCAAAATGCCCCAGTACAGCACTAAGGGTAATTGAGGCA				XqA1.1	Mus musculus G protein-coupled receptor 34 (Gpr34), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]		
Mus musculus	RefSeq	ILMN_248645	ILMN_248645	OLFR520	NM_147063.1	NM_147063.1		259066	22128832	NM_147063.1	Olfr520	NP_667274.1	ILMN_2910552	006370113	S	801	CCGGGCTGACCTGCCCTTGGACTTCCACATCATGGGGAATGTGGTCTATT	7	+	106884455-106884504	7qE2	Mus musculus olfactory receptor 520 (Olfr520), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR101-1	MOR101-1
Mus musculus	RefSeq	ILMN_197598	ILMN_197598	LOC195286	XM_111586.2	XM_111586.2			38076757	XM_111586.2	LOC195286		ILMN_2528691	006100500	S	328	TCAATTCTAAGGAGAGCTACAGCACCCTGCACATCAGGGATGCCCAGCTG										
Mus musculus	RefSeq	ILMN_209641	ILMN_257019	GAP43	NM_008083.2	NM_008083.2		14432	31982842	NM_008083.2	Gap43	NP_032109.1	ILMN_1234990	000460110	S	1049	CTTGGTGTTGTTATGGCGAGTTTTTGGTAATGATGATGCAGTCATCTTGG	16	-	42248876-42248925	16qB4	Mus musculus growth associated protein 43 (Gap43), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IEA]; The recognition of molecules at a choice point by an axon growth cone; at a choice point the growth cone determines the direction of its future growth [goid 16198] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	Basp2; B-50; GAP-43	Basp2; B-50; GAP-43
Mus musculus	RefSeq	ILMN_203867	ILMN_312785	LOC100046905	XM_001477200.1	XM_001477200.1		100046905	149258630	XM_001477200.1	LOC100046905	XP_001477250.1	ILMN_1255664	003120193	S	610	GCAGTGTTATGCCAGTAGCTGAGAAGCGGCTCGGGGTGGAGAACGGTTTT					PREDICTED: Mus musculus hypothetical protein LOC100046905 (LOC100046905), mRNA.					
Mus musculus	RefSeq	ILMN_199913	ILMN_199913	LOC381565	XM_358619.1	XM_358619.1			38078925	XM_358619.1	LOC381565		ILMN_2536936	007320746	S	678	TGCAGATGTAAGAAGACCCCACTAAGGAAGGCCGGACACCCCCAGGAGCT										
Mus musculus	Riken	ILMN_206361	ILMN_206361	A330094N15RIK	ri|A330094N15|PX00133O01|AK079644|3601					AK079644	A330094N15Rik		ILMN_2579533	001850187	S	3432	ACGGGCAATTTAGGAAAGCTGAGAGCAGGAGAAATAGTCTTTCCCATGGC										
Mus musculus	MEEBO	ILMN_218840	ILMN_218840	GAS8	scl33198.12.1_2	NM_018855.1			9256556	NM_018855.1	Gas8		ILMN_1239092	005340039	S	1425	CCACAATGACCTGCTGCGTACATATGAGGCGAAGTTACTGGCCTTCGGGA						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]	Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence TAS]; Any process involved in the controlled movement of a sperm cell [goid 30317] [pmid 11751847] [evidence IEP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_211225	ILMN_244048	AP2B1	NM_001035854.2	NM_001035854.2		71770	90403596	NM_001035854.2	Ap2b1	NP_001030931.1	ILMN_2711007	006980554	S	2456	GACAGACTTTGCCATCCAGTTTAACAAGAATAGCTTCGGTGTCATCCCAA	11	+	83181498-83181530:83183155-83183171	11qC	Mus musculus adaptor-related protein complex 2, beta 1 subunit (Ap2b1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence ISO]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence ISO]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1300012O03Rik; AI788979	1300012O03Rik; AI788979
Mus musculus	RefSeq	ILMN_211225	ILMN_244048	AP2B1	NM_001035854.2	NM_001035854.2		71770	90403596	NM_001035854.2	Ap2b1	NP_001030931.1	ILMN_1259631	005550400	S	2200	GACAGTCCTTCATCCCGTCATCAGTGCCTGCGACCTTCGCTCCTTCACCT	11	+	83179153-83179202	11qC	Mus musculus adaptor-related protein complex 2, beta 1 subunit (Ap2b1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence ISO]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence ISO]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1300012O03Rik; AI788979	1300012O03Rik; AI788979
Mus musculus	RefSeq	ILMN_244048	ILMN_244048	AP2B1	NM_001035854.2	NM_001035854.2		71770	90403596	NM_001035854.2	Ap2b1	NP_001030931.1	ILMN_3147944	000840753	A	5151	CTCCTTAGCCAAAGTGTGCGTCTGTCGAAAGCTGAAGTGCAGAGGGCAGG	11	+	83218277-83218326	11qC	Mus musculus adaptor-related protein complex 2, beta 1 subunit (Ap2b1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence ISO]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence ISO]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1300012O03Rik; AI788979	1300012O03Rik; AI788979
Mus musculus	RefSeq	ILMN_211225	ILMN_244048	AP2B1	NM_001035854.2	NM_001035854.2		71770	90403596	NM_001035854.2	Ap2b1	NP_001030931.1	ILMN_2655488	004880086	S	1541	CGATAACGCAGATGAATTACTAGAGAGTTTCCTGGAAGGTTTTCATGACG	11	+	83154881-83154930	11qC	Mus musculus adaptor-related protein complex 2, beta 1 subunit (Ap2b1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence ISO]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence ISO]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1300012O03Rik; AI788979	1300012O03Rik; AI788979
Mus musculus	RefSeq	ILMN_223050	ILMN_223050	FAM175A	NM_172405.3	NM_172405.3		70681	146149146	NM_172405.3	Fam175a	NP_765993.1	ILMN_2758642	005820025	S	1459	TGCTTTGTAAATGTGTACATATGTAGATGCATAGCTATAAATACATATAT				5qE4	Mus musculus family with sequence similarity 175, member A (Fam175a), mRNA.				AV118690; 3830405G04Rik; AI506069; 5630400M01Rik; AL024423	AV118690; 3830405G04Rik; AI506069; 5630400M01Rik; AL024423
Mus musculus	RefSeq	ILMN_213568	ILMN_213568	OLFR56	NM_010999.2	NM_010999.2		18356	141803453	NM_010999.2	Olfr56	NP_035129.1	ILMN_1255631	002710463	S	1521	GGCCAAGGCGATATCGCGCTCCTAGCCATGACAAAGTTGTCTCAATCTTC	11	+	48948480-48948529	11qB1.2	Mus musculus olfactory receptor 56 (Olfr56), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR276-1; IF7	MOR276-1; IF7
Mus musculus	RefSeq	ILMN_216407	ILMN_216407	LAMA1	NM_008480.2	NM_008480.2		16772	117168300	NM_008480.2	Lama1	NP_032506.2	ILMN_2973288	001190431	S	9325	TGTCGCCAGCCTCTGCCCTTGGAATCATCGCCAACGCATGGAAGAGAGCA	17	+	68171792-68171841	17qE1.1	Mus musculus laminin, alpha 1 (Lama1), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IMP]; The specification and formation of the apicobasal polarity of an epithelial cell [goid 45198] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	AA408497; Lama	AA408497; Lama
Mus musculus	RefSeq	ILMN_212876	ILMN_212876	OLFR144	NM_207665.1	NM_207665.1		257959	46575900	NM_207665.1	Olfr144	NP_997548.1	ILMN_2898116	005080440	S	734	GTACCCACATCTCTGCTGTTGCTATCTTCTATGGTTCAGGTGCATTCACG	9	-	39045233-39045282	9qA5.1	Mus musculus olfactory receptor 144 (Olfr144), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-41P; K4	MOR171-41P; K4
Mus musculus	RefSeq	ILMN_212945	ILMN_212945	PAFAH2	NM_133880.1	NM_133880.1		100163	19527095	NM_133880.1	Pafah2	NP_598641.1	ILMN_2777293	002360279	S	459	AGGAGTCTGGATACCCTTTGATCATCTTGTCCCATGGTCTAGGAGGGTTC	4	+	133960975-133961017:133966819-133966825	4qD3	Mus musculus platelet-activating factor acetylhydrolase 2 (Pafah2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex composed of two catalytic alpha subunits, which form a catalytic dimer, and a non-catalytic, regulatory beta subunit; the catalytic dimer may be an alpha1/alpha1 or alpha2/alpha2 homodimer, or an alpha1/alpha2 heterodimer. Modulates the action of platelet-activating factor (PAF) [goid 8247] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]	2310074E22Rik; AI507170	2310074E22Rik; AI507170
Mus musculus	RefSeq	ILMN_212945	ILMN_212945	PAFAH2	NM_133880.1	NM_133880.1		100163	19527095	NM_133880.1	Pafah2	NP_598641.1	ILMN_2631892	002360408	S	294	AGCATCAGAGAAGTGCGAGCAGCCCCTGTGGATTCCCCGCTACGAGTACA	4	+	133960048-133960097	4qD3	Mus musculus platelet-activating factor acetylhydrolase 2 (Pafah2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex composed of two catalytic alpha subunits, which form a catalytic dimer, and a non-catalytic, regulatory beta subunit; the catalytic dimer may be an alpha1/alpha1 or alpha2/alpha2 homodimer, or an alpha1/alpha2 heterodimer. Modulates the action of platelet-activating factor (PAF) [goid 8247] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]	2310074E22Rik; AI507170	2310074E22Rik; AI507170
Mus musculus	RefSeq	ILMN_212945	ILMN_212945	PAFAH2	NM_133880.1	NM_133880.1		100163	19527095	NM_133880.1	Pafah2	NP_598641.1	ILMN_2631894	004670167	S	299	TCAGAGAAGTGCGAGCAGCCCCTGTGGATTCCCCGCTACGAGTACAGCAT	4	+	133960053-133960102	4qD3	Mus musculus platelet-activating factor acetylhydrolase 2 (Pafah2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex composed of two catalytic alpha subunits, which form a catalytic dimer, and a non-catalytic, regulatory beta subunit; the catalytic dimer may be an alpha1/alpha1 or alpha2/alpha2 homodimer, or an alpha1/alpha2 heterodimer. Modulates the action of platelet-activating factor (PAF) [goid 8247] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]	2310074E22Rik; AI507170	2310074E22Rik; AI507170
Mus musculus	RefSeq	ILMN_212945	ILMN_212945	PAFAH2	NM_133880.1	NM_133880.1		100163	19527095	NM_133880.1	Pafah2	NP_598641.1	ILMN_2771665	007650148	S	3000	GCAACGGATGGAATGATTGAGTGGAGGGTTGGGTGACCCCTGGGTTATTA	4	+	133983146-133983195	4qD3	Mus musculus platelet-activating factor acetylhydrolase 2 (Pafah2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex composed of two catalytic alpha subunits, which form a catalytic dimer, and a non-catalytic, regulatory beta subunit; the catalytic dimer may be an alpha1/alpha1 or alpha2/alpha2 homodimer, or an alpha1/alpha2 heterodimer. Modulates the action of platelet-activating factor (PAF) [goid 8247] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]	2310074E22Rik; AI507170	2310074E22Rik; AI507170
Mus musculus	RefSeq	ILMN_228620	ILMN_228620	SSXB5	NM_199319.1	NM_199319.1		387586	51468093	NM_199319.1	Ssxb5	NP_955023.1	ILMN_3008642	000060370	S	258	GCGTGGCAAGGAGCAGGCCAAGCAATTCCTGGTTGAAGGCATTGAAGATC	X	+	7961657-7961706	XqA1.1	Mus musculus synovial sarcoma, X member B, breakpoint 5 (Ssxb5), mRNA.					
Mus musculus	RefSeq	ILMN_223951	ILMN_324495	LOC100045780	XM_001475019.1	XM_001475019.1		100045780	149262060	XM_001475019.1	LOC100045780	XP_001475069.1	ILMN_2772155	004670246	S	6187	GAATTTTCTTTTGATTTGGGAGATTGTTCACAGGAAGTAGTCCTCCCCTC					PREDICTED: Mus musculus similar to metalloprotease-disintegrin meltrin beta (LOC100045780), mRNA.					
Mus musculus	RefSeq	ILMN_215671	ILMN_215671	BACE1	NM_011792.4	NM_011792.4		23821	142366371	NM_011792.4	Bace1	NP_035922.3	ILMN_1217842	000580446	S	3768	CAGTGTAATTAAGCTTCCAGGATCACTACCATGAAAACGCCGCATTCTGC	9	+	45670195-45670244	9qA5.2	Mus musculus beta-site APP cleaving enzyme 1 (Bace1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]	C76936	C76936
Mus musculus	RefSeq	ILMN_189235	ILMN_215671	BACE1	NM_011792.4	NM_011792.4		23821	142366371	NM_011792.4	Bace1	NP_035922.3	ILMN_1236684	006100142	S	3797	GGTAGTGATCCTGGAAGCTTAATTACACTGTAGTTCTGAGCCGGAAGCGG	9	+	45670224-45670273	9qA5.2	Mus musculus beta-site APP cleaving enzyme 1 (Bace1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]	C76936	C76936
Mus musculus	Riken	ILMN_203695	ILMN_203695	MPDZ	ri|9630030A02|PX00115B11|AK036044|2976					AK036044	Mpdz		ILMN_1259044	002690162	S	2037	CTCTGAGCCTGACAGGAATGCCTTTTGGTACCCTGTTTCCCAGGACAGGC						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197546	ILMN_323510	LOC100047710	XM_001478721.1	XM_001478721.1		100047710	149251073	XM_001478721.1	LOC100047710	XP_001478771.1	ILMN_2528508	004200544	S	402	GCCAACCACAACAAGGCTTCCACTGGCAGGAAACAGTCTTCACACTCTTG					PREDICTED: Mus musculus hypothetical protein LOC100047710 (LOC100047710), mRNA.					
Mus musculus	RefSeq	ILMN_193712	ILMN_252173	POP4	NM_025390.4	NM_025390.4		66161	146135048	NM_025390.4	Pop4	NP_079666.1	ILMN_1238167	003940092	S	1116	GAAGGGGGCATTTAGGCTCTGCCTTTCCTACTTCTCTGTGTATCCTGAAC				7qB2	Mus musculus processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae) (Pop4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex that catalyzes cleavage of the leader sequence of precursor tRNAs (pre-tRNAs), generating the mature 5' end of tRNAs [goid 30677] [evidence IEA]; A ribonucleoprotein complex that cleaves the rRNA precursor as part of rRNA transcript processing. It also has other roles: In S. cerevisiae it is involved in cell cycle-regulated degradation of daughter cell-specific mRNAs, while in mammalian cells it also enters the mitochondria and processes RNAs to create RNA primers for DNA replication [goid 172] [evidence IEA]; A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]	1110023P21Rik; Rpp29	1110023P21Rik; Rpp29
Mus musculus	RefSeq	ILMN_220386	ILMN_220386	SCAMP5	NM_020270.2	NM_020270.2		56807	31543673	NM_020270.2	Scamp5	NP_064666.1	ILMN_1242246	007160372	S	3118	GCAGTTGACCTGCCCGAGCCAGTGTCTATCTGTGTAACTGGATGAATATA	9	-	57289157-57289206	9qB	Mus musculus secretory carrier membrane protein 5 (Scamp5), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		Sc5; AI426171; AW558254	Sc5; AI426171; AW558254
Mus musculus	RefSeq	ILMN_220386	ILMN_220386	SCAMP5	NM_020270.2	NM_020270.2		56807	31543673	NM_020270.2	Scamp5	NP_064666.1	ILMN_1255263	003850280	S	368	CTGGCTCATCCTCTTCACACCTTGCTCCTACGTCTGCTGGTTTCGGCCCA	9	-	57294899-57294948	9qB	Mus musculus secretory carrier membrane protein 5 (Scamp5), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		Sc5; AI426171; AW558254	Sc5; AI426171; AW558254
Mus musculus	Riken	ILMN_202732	ILMN_202732	C330049H01RIK	ri|C330049H01|PX00078A01|AK021230|931					AK021230	C330049H01Rik		ILMN_2551852	004200075	S	430	TTTTCGAAGCAATCGTTGGGGTCTGGGTCAGTTTCACAGGGTTATGCCAT										
Mus musculus	RefSeq	ILMN_185202	ILMN_249746	PHLDA2	NM_009434.2	NM_009434.2		22113	57863299	NM_009434.2	Phlda2	NP_033460.1	ILMN_2425029	006290014	S	550	GGTGACGCCGCCGCTGCTCTTCACCGAAGATATTCCCGTGCTTGCTGAGC	7	-	150687590-150687639	7qF5	Mus musculus pleckstrin homology-like domain, family A, member 2 (Phlda2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]		Tssc3; Ipl	Tssc3; Ipl
Mus musculus	RefSeq	ILMN_219549	ILMN_219549	P2RY4	NM_020621.2	NM_020621.2		57385	31543377	NM_020621.2	P2ry4	NP_065646.1	ILMN_1237953	001400646	S	4235	CACAGTGATATATGGCTAGCTTAGTTCCATTGCTGTTCCAGCATCAGACT	X	-	96793022-96793071	XqC3	Mus musculus pyrimidinergic receptor P2Y, G-protein coupled, 4 (P2ry4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of chloride ions across an epithelium [goid 30321] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with pyrimidine nucleotide, any compound consisting of a pyrimidine nucleoside esterified with (ortho)phosphate [goid 19103] [evidence IC ]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA];  [goid 45030] [evidence IDA]	P2Y4; P2Y4R	P2Y4; P2Y4R
Mus musculus	RefSeq	ILMN_198287	ILMN_198287	LOC381151	XM_355074.1	XM_355074.1			38083641	XM_355074.1	LOC381151		ILMN_1241574	005130670	S	241	GGTGTCAGCGTTTGGAAGCTGATCATGGGATGGATCTCTGGATATGGCAA										
Mus musculus	RefSeq	ILMN_210749	ILMN_210749	PBX3	NM_016768.1	NM_016768.1		18516	7949104	NM_016768.1	Pbx3	NP_058048.1	ILMN_2642148	002470669	S	1178	GCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCAAGTCGGAGCCAATG	2	-	34032279-34032328	2qB	Mus musculus pre B-cell leukemia transcription factor 3 (Pbx3), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input [goid 21516] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210749	ILMN_210749	PBX3	NM_016768.1	NM_016768.1		18516	7949104	NM_016768.1	Pbx3	NP_058048.1	ILMN_2650972	003400133	S	569	TTACAGAGCCAAATTGACCCAGATCAGACAAATCTATCACACAGAACTGG	2	-	34079938-34079987	2qB	Mus musculus pre B-cell leukemia transcription factor 3 (Pbx3), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input [goid 21516] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210749	ILMN_210749	PBX3	NM_016768.1	NM_016768.1		18516	7949104	NM_016768.1	Pbx3	NP_058048.1	ILMN_2642147	006380400	S	1174	CATGCAGAGTCTGAATGGGGATTCTTACCAAGGGTCCCAAGTCGGAGCCA	2	-	34032283-34032332	2qB	Mus musculus pre B-cell leukemia transcription factor 3 (Pbx3), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input [goid 21516] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_222358	ILMN_222358	SPA17	NM_011449.1	NM_011449.1		20686	6755613	NM_011449.1	Spa17	NP_035579.1	ILMN_1249346	001580053	S	504	CAGATAAGAATGAGAATCTGAAAGAAGAGGCAGACAATTGAGACCACAGG	9	-	37410909-37410924:37410925-37410958	9qA4	Mus musculus sperm autoantigenic protein 17 (Spa17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]	Sp17	Sp17
Mus musculus	MEEBO	ILMN_218202	ILMN_218202	F830004M19RIK	scl34522.1.1_225	NM_177106.2			31342819	NM_177106.2	F830004M19Rik		ILMN_2692899	001740369	S	3860	GTGTGGCTTAATTTTAGTAGAGTTTCTCCTAACATGTCTGAAATCACAGG										
Mus musculus	RefSeq	ILMN_246729	ILMN_246729	HPS5	NM_001005248.1	NM_001005248.1		246694	52546697	NM_001005248.1	Hps5	NP_001005248.1	ILMN_3113686	006100026	A	4328	GTAGGTATACCAGGCTGTCTCGACTTTAAATATCTACTGCCTCTGCCTCC	7	-	54016038-54016087	7qB4	Mus musculus Hermansky-Pudlak syndrome 5 homolog (human) (Hps5), transcript variant 2, mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ru-2; C85120; AI646796; MGC99886; hz; AL022647; ru2; mr; haze; maroon	ru-2; C85120; AI646796; MGC99886; hz; AL022647; ru2; mr; haze; maroon
Mus musculus	RefSeq	ILMN_221764	ILMN_246729	HPS5	NM_001005248.1	NM_001005248.1		246694	52546697	NM_001005248.1	Hps5	NP_001005248.1	ILMN_2740006	006860348	S	4499	CATGTAACTGGATTGTCATTTATGAAGCTTTATGTAGCCTGTTATGTTGG	7	-	54015867-54015916	7qB4	Mus musculus Hermansky-Pudlak syndrome 5 homolog (human) (Hps5), transcript variant 2, mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ru-2; C85120; AI646796; MGC99886; hz; AL022647; ru2; mr; haze; maroon	ru-2; C85120; AI646796; MGC99886; hz; AL022647; ru2; mr; haze; maroon
Mus musculus	RefSeq	ILMN_218063	ILMN_246729	HPS5	NM_001005248.1	NM_001005248.1		246694	52546697	NM_001005248.1	Hps5	NP_001005248.1	ILMN_2691085	002260102	S	257	CCGTCATCTTTCTGGCTAAATGACTTTTGTGCCAGTGATACCAGAAGCCT	7	-	54046363-54046394:54046395-54046412	7qB4	Mus musculus Hermansky-Pudlak syndrome 5 homolog (human) (Hps5), transcript variant 2, mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ru-2; C85120; AI646796; MGC99886; hz; AL022647; ru2; mr; haze; maroon	ru-2; C85120; AI646796; MGC99886; hz; AL022647; ru2; mr; haze; maroon
Mus musculus	MEEBO	ILMN_195303	ILMN_195303	1300011L04RIK	scl071763.1_323						1300011L04Rik		ILMN_2514368	006180220	S	3	GGAAGCTCAGCCCCGAACCTGATTCTGTCCTCTCCCAGCCTCTCTGTGAG										
Mus musculus	MEEBO	ILMN_195200	ILMN_195200	CDC14B	scl43824.13_11				31982553	NM_172587	Cdc14b		ILMN_2513443	001660047	S	3	GATTTTAAGTGTCTATTAAGAATTCTCCTCTTTACAAATAGTACCTTTTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215334	ILMN_215334	OLFR998	NM_146436.1	NM_146436.1		258428	33239185	NM_146436.1	Olfr998	NP_666647.1	ILMN_2658244	006960070	S	795	TTTTTCCTTAAACATCAACAAAATGATTTCTCTGTTTTATACTGTGGTGA	2	+	85431493-85431542	2qD	Mus musculus olfactory receptor 998 (Olfr998), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR175-5	MOR175-5
Mus musculus	RefSeq	ILMN_240288	ILMN_240288	1600014C10RIK	NM_028166.2	NM_028166.2		72244	31541829	NM_028166.2	1600014C10Rik	NP_082442.1	ILMN_2822842	007380608	S	2838	GCTTTTTGAAACCACTGAGCTGCTAGCCACGGAAGCTGGAGTTTGGCCTG	7	+	38982305-38982354	7qB2	Mus musculus RIKEN cDNA 1600014C10 gene (1600014C10Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI428873	AI428873
Mus musculus	RefSeq	ILMN_212533	ILMN_312968	BC024139	XR_035100.1	XR_035100.1		271278	149266560	XR_035100.1	BC024139		ILMN_2627523	003460400	S	2702	GAAGACTCCAAGATCCAGAAGATAGGGACAGGAAACCGTGGCAGAGCATG	15	-	75950127-75950176	15qD3	PREDICTED: Mus musculus cDNA sequence BC024139 (BC024139), misc RNA.					
Mus musculus	MEEBO	ILMN_213054	ILMN_213054	GUK1	scl40166.10.1_13				31982306	NM_008193	Guk1		ILMN_2771360	006560598	S	791	TCTGACCACAAGGTGGCTCTGCACCGTGGGCTGACTCACTGGCTGAATGA								Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + GMP = ADP + GDP [goid 4385] [evidence IDA]; Catalysis of the reaction: ATP + GMP = ADP + GDP [goid 4385] [evidence ISO]		
Mus musculus	RefSeq	ILMN_217973	ILMN_314869	LOC100048331	XR_034509.1	XR_034509.1		100048331	149259670	XR_034509.1	LOC100048331		ILMN_2689986	005690181	S	2638	GCCCGTCATTCTCACTGTACAGCCATACTGCAAAGGGCTTTCTGCTTGTG					PREDICTED: Mus musculus similar to DnaJ (Hsp40) homolog, subfamily A, member 4 (LOC100048331), misc RNA.					
Mus musculus	RefSeq	ILMN_207433	ILMN_314869	LOC100048331	XR_034509.1	XR_034509.1		100048331	149259670	XR_034509.1	LOC100048331		ILMN_1242041	007570112	S	2089	GGGGAGAAAAACCACAGACTAGAGATGGGCCAGACACCCACCTTCTGGGC					PREDICTED: Mus musculus similar to DnaJ (Hsp40) homolog, subfamily A, member 4 (LOC100048331), misc RNA.					
Mus musculus	MEEBO	ILMN_185295	ILMN_185295	IGKV4-90_AJ231224_IG_KAPPA_VARIABLE_4-90_22	IGKV4-90_AJ231224_Ig_kappa_variable_4-90_22						IGKV4-90_AJ231224_Ig_kappa_variable_4-90_22		ILMN_2425835	001570068	S	18	AGTGTCACAGTCATATTGACCAATGGAGAAATTTTGCTCACCCAGTCTCC										
Mus musculus	RefSeq	ILMN_201160	ILMN_201160	LOC385031	XM_358004.1	XM_358004.1			38089538	XM_358004.1	LOC385031		ILMN_2541303	002680768	S	522	CAGCATGGTGAAGAACTGTGACACAAGAGTGGAGAACTGTGACACAACAG										
Mus musculus	RefSeq	ILMN_208611	ILMN_251045	MSC	NM_010827.2	NM_010827.2		17681	118130167	NM_010827.2	Msc	NP_034957.1	ILMN_2769777	001230746	S	1627	CTACCCAGTACATGGTGCTTAGTGGTCCTGGCAATGCTGCACTATCATGG	1	-	14743467-14743516	1qA3	Mus musculus musculin (Msc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MyoR	MyoR
Mus musculus	MEEBO	ILMN_188014	ILMN_188014	2310015A05RIK	scl072315.4_71				51829961	XM_354949	2310015A05Rik		ILMN_2449107	004670681	S	10	CTGCCAGGCTGCCGTCCATATGCTGAGCACTACTTTACTCTTTCTCCTGG										
Mus musculus	MEEBO	ILMN_188014	ILMN_188014	2310015A05RIK	scl072315.4_71				51829961	XM_354949	2310015A05Rik		ILMN_1239536	002650577	S	1	AGCAGGGAGCTGCCAGGCTGCCGTCCATATGCTGAGCACTACTTTACTCT										
Mus musculus	RefSeq	ILMN_218201	ILMN_258723	METTL10	NM_028095.1	NM_028095.1		72096	47059503	NM_028095.1	Mettl10	NP_082371.1	ILMN_2692889	004730484	S	755	CCTTGGACAAAATCAGTTAGCTTTCTAGAAGAAACTGCAAAGTCAACCTG	7	-	140019416-140019446:140019447-140019465	7qF3	Mus musculus methyltransferase like 10 (Mettl10), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC144343	MGC144343
Mus musculus	RefSeq	ILMN_194839	ILMN_229478	ADHFE1	NM_175236.3	NM_175236.3		76187	142370905	NM_175236.3	Adhfe1	NP_780445.1	ILMN_2688651	002570156	S	2926	CCCCTGGGGTACCGGATTTCTGTTCCTGTCACCTGAACCTTTATTTAACC	1	+	9567870-9567919	1qA2	Mus musculus alcohol dehydrogenase, iron containing, 1 (Adhfe1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxybutanoate + 2-oxoglutarate = acetoacetate + (R)-2-hydroxyglutarate [goid 47988] [evidence IEA]	Adh8; AI043035; 6330565B14Rik	Adh8; AI043035; 6330565B14Rik
Mus musculus	Riken	ILMN_203027	ILMN_203027	CCNF	ri|6030461A16|PX00057B11|AK031613|2225					AK031613	Ccnf		ILMN_1219838	005960711	S	2104	CACTGACAATGTCTAGAGCAGCAGGTTTTCAGCCTGTGGATCTTCACCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The resumption of the mitotic cell division cycle by cells that were in a quiescent or other non-dividing state [goid 320] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]			
Mus musculus	RefSeq	ILMN_216487	ILMN_216487	TES	NM_011570.2	NM_011570.2		21753	34536818	NM_011570.2	Tes	NP_035700.2	ILMN_3084954	007550121	A	2482	GGTGTTACCAGATGGATCCTCTCTTGTGCTACCTCTGAGCTTGCTGTAGA	6	+	17055625-17055674	6qA2	Mus musculus testis derived transcript (Tes), transcript variant 1, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	testin2; D6Ertd352e; Tes1; Tes2; TESS	testin2; D6Ertd352e; Tes1; Tes2; TESS
Mus musculus	RefSeq	ILMN_216487	ILMN_216487	TES	NM_011570.2	NM_011570.2		21753	34536818	NM_011570.2	Tes	NP_035700.2	ILMN_3013964	002970669	I	263	CTGGATCAAGAGGGTCACCTGAATTGTTGCCAGCGTATCTGGTTTCTTGA	6	+	17032501-17032550	6qA2	Mus musculus testis derived transcript (Tes), transcript variant 1, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	testin2; D6Ertd352e; Tes1; Tes2; TESS	testin2; D6Ertd352e; Tes1; Tes2; TESS
Mus musculus	RefSeq	ILMN_196303	ILMN_239314	HSD11B2	NM_008289.2	NM_008289.2		15484	133778912	NM_008289.2	Hsd11b2	NP_032315.2	ILMN_2731265	006650168	S	1031	CGGGCAGTTCCTGAATTCACTCAGAATGGCATTGCCTGACCTTAGCCCAG	8	+	108047070-108047119	8qD3	Mus musculus hydroxysteroid 11-beta dehydrogenase 2 (Hsd11b2), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	11HSD2	11HSD2
Mus musculus	RefSeq	ILMN_196303	ILMN_239314	HSD11B2	NM_008289.2	NM_008289.2		15484	133778912	NM_008289.2	Hsd11b2	NP_032315.2	ILMN_1229516	000380280	S	1412	CTGTGTTAAGCCCAGCCCAGCCTCTATTGCTGATGCCTCGTCCAGCCCAG	8	+	108047451-108047500	8qD3	Mus musculus hydroxysteroid 11-beta dehydrogenase 2 (Hsd11b2), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	11HSD2	11HSD2
Mus musculus	Riken	ILMN_203838	ILMN_203838	A330019B12RIK	ri|A330019B12|PX00130J05|AK039302|1415					AK039302	A330019B12Rik		ILMN_2560343	006280035	S	1330	GTGCTGTGAAAGGACAGCTAAGTGAAAGCCACGGGAAGTTTTCTGATGTG										
Mus musculus	RefSeq	ILMN_210780	ILMN_210780	GPLD1	NM_008156.2	NM_008156.2		14756	111378396	NM_008156.2	Gpld1	NP_032182.2	ILMN_1259182	006940064	S	2797	AGCCCGGCTCTCTGGGGCACTTCATGTCTACAGCTTCAGCTCAGACTAAA	13	+	25081943-25081991:25081992-25081992	13qA3.1	Mus musculus glycosylphosphatidylinositol specific phospholipase D1 (Gpld1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	 [goid 6507] [evidence IDA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: glycoprotein phosphatidylinositol + H2O = phosphatidate + glycoprotein inositol [goid 4621] [evidence IEA]; Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [evidence IDA]	AW546131; 6330541J12Rik	AW546131; 6330541J12Rik
Mus musculus	RefSeq	ILMN_210780	ILMN_210780	GPLD1	NM_008156.2	NM_008156.2		14756	111378396	NM_008156.2	Gpld1	NP_032182.2	ILMN_2673522	006420368	S	2562	CTTCCGGACTGCTAGGGGGAGAAGATGGGCGAGTGTACATTTATAATGGC	13	+	25076619-25076668	13qA3.1	Mus musculus glycosylphosphatidylinositol specific phospholipase D1 (Gpld1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	 [goid 6507] [evidence IDA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: glycoprotein phosphatidylinositol + H2O = phosphatidate + glycoprotein inositol [goid 4621] [evidence IEA]; Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [evidence IDA]	AW546131; 6330541J12Rik	AW546131; 6330541J12Rik
Mus musculus	RefSeq	ILMN_213643	ILMN_257837	OLFR1433	NM_146685.2	NM_146685.2		258680	148222269	NM_146685.2	Olfr1433	NP_666896.2	ILMN_2639249	006940309	S	600	TGTCATATTAACAATGTTTTTTGGGCTTATAAACGCCTTAGCCATCATGG				19qA	Mus musculus olfactory receptor 1433 (Olfr1433), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR214-4; Olfr1433-ps1	MOR214-4; Olfr1433-ps1
Mus musculus	MEEBO	ILMN_213435	ILMN_213435	MYAK	scl0002122.1_17				5305332	AF071071	Myak		ILMN_2637032	006900008	S	3477	CTTCCCTGTTGTTACTCTTTGGAGAACCCTGCTTCTAGCTGGACCGCTGA										
Mus musculus	RefSeq	ILMN_220223	ILMN_220223	AP2S1	NM_198613.1	NM_198613.1		232910	38348471	NM_198613.1	Ap2s1	NP_941015.1	ILMN_1212941	007100181	S	400	AGATGTTCCTGGCAGGAGAGATCCGAGAGACCAGCCAGACGAAGGTGCTG	7	+	17334289-17334338	7qA2	Mus musculus adaptor-related protein complex 2, sigma 1 subunit (Ap2s1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles [goid 30122] [evidence ISO]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI043088; MGC62945	AI043088; MGC62945
Mus musculus	RefSeq	ILMN_220223	ILMN_220223	AP2S1	NM_198613.1	NM_198613.1		232910	38348471	NM_198613.1	Ap2s1	NP_941015.1	ILMN_2911283	006100563	S	570	TCCCTTCCTCAGCTGGCCCAGAGGAAGGACCCGGCAGGGTCTAGGCCACA	7	+	17334459-17334508	7qA2	Mus musculus adaptor-related protein complex 2, sigma 1 subunit (Ap2s1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles [goid 30122] [evidence ISO]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI043088; MGC62945	AI043088; MGC62945
Mus musculus	RefSeq	ILMN_220223	ILMN_220223	AP2S1	NM_198613.1	NM_198613.1		232910	38348471	NM_198613.1	Ap2s1	NP_941015.1	ILMN_2762255	001170347	S	227	CTACCGACGCTACGCTGGCCTCTACTTCTGCATCTGCGTGGATGTCAACG	7	+	17332639-17332688	7qA2	Mus musculus adaptor-related protein complex 2, sigma 1 subunit (Ap2s1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles [goid 30122] [evidence ISO]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI043088; MGC62945	AI043088; MGC62945
Mus musculus	MEEBO	ILMN_216691	ILMN_216691	OLFR918	scl36017.1.40_196	XM_146748.1			20884584	XM_146748.1	Olfr918		ILMN_1236439	000990605	S	754	TTGGGTCAGGGGCATTCATGTATCTTAATCATTCTGGATCTATGAACCAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	Riken	ILMN_203996	ILMN_203996	ANXA7	ri|A630042F09|PX00145J22|AK041855|990					AK041855	Anxa7		ILMN_2561575	004010376	S	895	GGCTCTGACACCCTCTTTCAGCCTCCTAGAGCATTGCATGAGTATAGTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of water within a cell [goid 9992] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment [goid 9651] [evidence IMP]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IMP]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215607	ILMN_215607	TEKT1	NM_011569.2	NM_011569.2		21689	117956378	NM_011569.2	Tekt1	NP_035699.2	ILMN_1239718	006040491	S	1060	ACCAGGACGCACCGGCCGAACGTGGAGCTGTGTCGAGATATTGCCCAGTA	11	-	72159132-72159181	11qB4	Mus musculus tektin 1 (Tekt1), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MT14	MT14
Mus musculus	RefSeq	ILMN_215607	ILMN_215607	TEKT1	NM_011569.2	NM_011569.2		21689	117956378	NM_011569.2	Tekt1	NP_035699.2	ILMN_2700097	006770376	S	1249	ACCATCTATATCGACCAGGTGCTGTGTATGGAGATGAGGAAGTCCATCCC	11	-	72158329-72158378	11qB4	Mus musculus tektin 1 (Tekt1), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MT14	MT14
Mus musculus	RefSeq	ILMN_256934	ILMN_256934	RTP3	NM_153100.1	NM_153100.1		235636	23346528	NM_153100.1	Rtp3	NP_694740.1	ILMN_2864416	007510594	S	1439	GTGAGGCCGCCTGTAATTGCATGTCACAGAGTCCACTGTGTTGCTTGGCC	9	-	110888413-110888462	9qF3	Mus musculus receptor transporter protein 3 (Rtp3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC118000; Tmem7	MGC118000; Tmem7
Mus musculus	RefSeq	ILMN_222397	ILMN_222397	CHCHD10	NM_175329.3	NM_175329.3		103172	34013513	NM_175329.3	Chchd10	NP_780538.2	ILMN_2749037	004040435	S	889	GGAAGGATCGTTCTCACCCCGCAGACTAACAGGAGACATAATTATTCAAT	10	+	75395419-75395468	10qC1	Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 10 (Chchd10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			1620401E04Rik; AI267078	1620401E04Rik; AI267078
Mus musculus	RefSeq	ILMN_236248	ILMN_236248	2610109H07RIK	NM_027426.1	NM_027426.1		70433	58037208	NM_027426.1	2610109H07Rik	NP_081702.1	ILMN_3018201	003130324	I	2763	GCCAGGAGTCGGAAGGATCAAGGCCAAGGTGGGAAAGCAAGTCCTAATAC	4	-	146944624-146944673	4qE2	Mus musculus RIKEN cDNA 2610109H07 gene (2610109H07Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_236248	ILMN_236248	2610109H07RIK	NM_027426.1	NM_027426.1		70433	58037208	NM_027426.1	2610109H07Rik	NP_081702.1	ILMN_3089931	002750678	A	1123	ACCGGAGACAGCCAACGGGGACCAGGGATCTTTCATCAACATCTAGTGCC	4	-	146946264-146946269:146946270-146946313	4qE2	Mus musculus RIKEN cDNA 2610109H07 gene (2610109H07Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211718	ILMN_314755	2310006M14RIK	XR_033650.1	XR_033650.1		76422	149234276	XR_033650.1	2310006M14Rik		ILMN_1259209	006350092	S	2839	GCAGGCTAACCCTTGAGTCCTGTACTGGAAATGGTGTGTCCCTGCGGAAC	1	-	138078262-138078311	1qE4	PREDICTED: Mus musculus RIKEN cDNA 2310006M14 gene (2310006M14Rik), misc RNA.					
Mus musculus	Riken	ILMN_204290	ILMN_204290	AZI2	ri|9630036C09|PX00116H01|AK036102|1818					AK036102	Azi2		ILMN_2563847	002970255	S	1391	GCCTTTGGTGGGCGAGCTTGACCACAGGCTGTAAGCCATTCTAACCTCCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]			
Mus musculus	Riken	ILMN_202291	ILMN_202291	4932441N08RIK	ri|4932441N08|PX00019A15|AK016562|2708					AK016562	4932441N08Rik		ILMN_1254640	007000228	S	1475	CTGGAGAAAGAGAACGGCCCTACCCACAGGTGGCAGAGATTAGCAGTTCC										
Mus musculus	RefSeq	ILMN_212664	ILMN_324029	5730588L14RIK	XM_001478072.1	XM_001478072.1		329369	149249150	XM_001478072.1	5730588L14Rik	XP_001478122.1	ILMN_1242774	007650711	S	3717	TCCCTCTACAGAAGCCTGTGTGTTTGTCCTAGACCCCCAGTGCACTAAGG				2qA3	PREDICTED: Mus musculus RIKEN cDNA 5730588L14 gene, transcript variant 1 (5730588L14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223650	ILMN_223650	PAK7	NM_172858.2	NM_172858.2		241656	134949023	NM_172858.2	Pak7	NP_766446.2	ILMN_1249906	006040044	S	3551	CATGGCATCCTCAGTGGCCAAATTTCCCTCCCAGGGAGTAATTTTAGCGC	2	-	135907996-135908045	2qF3	Mus musculus p21 (CDKN1A)-activated kinase 7 (Pak7), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	Pak5; 2900083L08Rik; MGC117585; 6430627N20	Pak5; 2900083L08Rik; MGC117585; 6430627N20
Mus musculus	RefSeq	ILMN_217127	ILMN_217127	CHGB	NM_007694.4	NM_007694.4		12653	145966789	NM_007694.4	Chgb	NP_031720.1	ILMN_2679377	004540561	S	2326	TACGACTCGGAGGAGCAGATGGGGCCTCACCAGGAGGCAAACGATGAAAA				2qF2	Mus musculus chromogranin B (Chgb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Scg-1	Scg-1
Mus musculus	RefSeq	ILMN_219000	ILMN_219000	TAS2R106	NM_207016.1	NM_207016.1		387341	46309586	NM_207016.1	Tas2r106	NP_996899.1	ILMN_2702928	005090408	S	537	CCTGGGAGTTATATTCTTCTTTATGGTGGCTATCATTACATGCTTCCTAT	6	-	131628318-131628367	6qF3	Mus musculus taste receptor, type 2, member 106 (Tas2r106), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mGR06; T2R06; Tas2r6; mt2r44; MGC130068	mGR06; T2R06; Tas2r6; mt2r44; MGC130068
Mus musculus	RefSeq	ILMN_213981	ILMN_213981	MCRS1	NM_016766.2	NM_016766.2		51812	31980614	NM_016766.2	Mcrs1	NP_058046.2	ILMN_1214431	000050086	S	362	ATTCGATGATGAACTGGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGG	15	-	99079857-99079906	15qF1	Mus musculus microspherule protein 1 (Mcrs1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			ICP22BP; P78; MSP58; C78274; MGC117915; MGC103140	ICP22BP; P78; MSP58; C78274; MGC117915; MGC103140
Mus musculus	RefSeq	ILMN_213981	ILMN_213981	MCRS1	NM_016766.2	NM_016766.2		51812	31980614	NM_016766.2	Mcrs1	NP_058046.2	ILMN_1257515	006450546	S	1591	GCAGAAACCAGGGCATTCTCCAGCCTCAGTTTCCCTGTCATTCCAGCTCC	15	-	99073495-99073544	15qF1	Mus musculus microspherule protein 1 (Mcrs1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			ICP22BP; P78; MSP58; C78274; MGC117915; MGC103140	ICP22BP; P78; MSP58; C78274; MGC117915; MGC103140
Mus musculus	RefSeq	ILMN_213981	ILMN_213981	MCRS1	NM_016766.2	NM_016766.2		51812	31980614	NM_016766.2	Mcrs1	NP_058046.2	ILMN_1238672	006100372	S	367	ATGATGAACTGGTAGAGAGCAGCCTGGCCAAATCCTCCACCCGGGTGAAG	15	-	99079852-99079901	15qF1	Mus musculus microspherule protein 1 (Mcrs1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			ICP22BP; P78; MSP58; C78274; MGC117915; MGC103140	ICP22BP; P78; MSP58; C78274; MGC117915; MGC103140
Mus musculus	RefSeq	ILMN_215643	ILMN_215643	TCEA1	NM_011541.3	NM_011541.3		21399	40254396	NM_011541.3	Tcea1	NP_035671.1	ILMN_2661939	002370066	S	2444	AAAAATAAAGTACAGTTTGAAAGAATTAGTTTAAAAGTAATAAGGTTAAA	1	+	4887884-4887933	1qA1	Mus musculus transcription elongation factor A (SII) 1 (Tcea1), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	S-II; MGC103154	S-II; MGC103154
Mus musculus	RefSeq	ILMN_210332	ILMN_210332	PRLR	NM_011169.3	NM_011169.3		19116	34328490	NM_011169.3	Prlr	NP_035299.3	ILMN_2868699	003990377	S	1839	ACAAAGACGGAGTGCTATCATTACTCCCCAAGCAGAGAGAAAACCACCAG	15	+	10273673-10273722	15qA1	Mus musculus prolactin receptor (Prlr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]; Any process that modulates the frequency, rate or extent of epithelial cell differentiation [goid 30856] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with prolactin to initiate a change in cell activity [goid 4925] [evidence IMP]; Combining with prolactin to initiate a change in cell activity [goid 4925] [evidence IDA]	Pr-3; Prlr-rs1; AI987712; Pr-1	Pr-3; Prlr-rs1; AI987712; Pr-1
Mus musculus	RefSeq	ILMN_219643	ILMN_219643	HERPUD2	NM_020586.1	NM_020586.1		80517	10181159	NM_020586.1	Herpud2	NP_065611.1	ILMN_2730516	006620132	S	891	CTCCAAAATCCAGCACCGATAGAGGAAGTCACGAAGCACTGGCATCCAGC	9	-	24934991-24935040	9qA4	Mus musculus HERPUD family member 2 (Herpud2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]		5031400M07Rik; AB041580	5031400M07Rik; AB041580
Mus musculus	RefSeq	ILMN_219643	ILMN_219643	HERPUD2	NM_020586.1	NM_020586.1		80517	10181159	NM_020586.1	Herpud2	NP_065611.1	ILMN_2730514	005080348	S	874	CGGAGTCCTCCCAGTTCTCCAAAATCCAGCACCGATAGAGGAAGTCACGA	9	-	24935008-24935057	9qA4	Mus musculus HERPUD family member 2 (Herpud2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]		5031400M07Rik; AB041580	5031400M07Rik; AB041580
Mus musculus	RefSeq	ILMN_219643	ILMN_219643	HERPUD2	NM_020586.1	NM_020586.1		80517	10181159	NM_020586.1	Herpud2	NP_065611.1	ILMN_2751158	003310170	S	1397	GCCCAGTGCTGAATGAAGAAGACTTGAACCGCGACTGGCTGGACTGGGTG	9	-	24914956-24915005	9qA4	Mus musculus HERPUD family member 2 (Herpud2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]		5031400M07Rik; AB041580	5031400M07Rik; AB041580
Mus musculus	RefSeq	ILMN_219643	ILMN_219643	HERPUD2	NM_020586.1	NM_020586.1		80517	10181159	NM_020586.1	Herpud2	NP_065611.1	ILMN_1228733	002850440	S	1401	CAGTGCTGAATGAAGAAGACTTGAACCGCGACTGGCTGGACTGGGTGTAC	9	-	24914952-24915001	9qA4	Mus musculus HERPUD family member 2 (Herpud2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]		5031400M07Rik; AB041580	5031400M07Rik; AB041580
Mus musculus	RefSeq	ILMN_210128	ILMN_210128	CDH23	NM_023370.2	NM_023370.2		22295	124517679	NM_023370.2	Cdh23	NP_075859.2	ILMN_2641588	000110110	S	10237	AGGGGCAAGATGGAATCCACATGGTTCATGGCAGCACGGGCACACTGCTG	10	-	59766307-59766356	10qB4	Mus musculus cadherin 23 (otocadherin) (Cdh23), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IDA]; The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence ISS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IMP]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	bus; nmf252; ahl; 4930542A03Rik; nmf181; mdfw; nmf112; ahl1; USH1D; v; bob	bus; nmf252; ahl; 4930542A03Rik; nmf181; mdfw; nmf112; ahl1; USH1D; v; bob
Mus musculus	RefSeq	ILMN_202459	ILMN_210128	CDH23	NM_023370.2	NM_023370.2		22295	124517679	NM_023370.2	Cdh23	NP_075859.2	ILMN_1228011	006450332	S	161	TTGGGAGACATGCCGGAGCAGCTGTGGCCAGGGCAAGCCTCTTCTGATCT	10	-	60149832-60149851:60159048-60159077	10qB4	Mus musculus cadherin 23 (otocadherin) (Cdh23), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IDA]; The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence ISS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IMP]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	bus; nmf252; ahl; 4930542A03Rik; nmf181; mdfw; nmf112; ahl1; USH1D; v; bob	bus; nmf252; ahl; 4930542A03Rik; nmf181; mdfw; nmf112; ahl1; USH1D; v; bob
Mus musculus	RefSeq	ILMN_210128	ILMN_210128	CDH23	NM_023370.2	NM_023370.2		22295	124517679	NM_023370.2	Cdh23	NP_075859.2	ILMN_2672033	005960731	S	10408	CCACCCCTCTGCATAAGCTCCGGGACGTTATCATGGAGAGCCCTCTGGAA	10	-	59766136-59766185	10qB4	Mus musculus cadherin 23 (otocadherin) (Cdh23), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IDA]; The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence ISS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IMP]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	bus; nmf252; ahl; 4930542A03Rik; nmf181; mdfw; nmf112; ahl1; USH1D; v; bob	bus; nmf252; ahl; 4930542A03Rik; nmf181; mdfw; nmf112; ahl1; USH1D; v; bob
Mus musculus	RefSeq	ILMN_197573	ILMN_197573	LOC380932	XM_358468.1	XM_358468.1			38076639	XM_358468.1	LOC380932		ILMN_1221971	004850768	S	437	TGTTCCCGCTGATCCTGCCAGCCCAGTGGATGGAGCCCAGAATCCACAAA										
Mus musculus	RefSeq	ILMN_222814	ILMN_222814	ACIN1	NM_019567.2	NM_019567.2		56215	146231935	NM_019567.2	Acin1	NP_062513.2	ILMN_2755195	006110343	S	77	ACTACCAGCAACCTGGCCCTCTTCCTCCTCTTCCTCCAGAGAGACCAGTC				14qC3	Mus musculus apoptotic chromatin condensation inducer 1 (Acin1), transcript variant 1, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence ISS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2610036I19Rik; acinusL; 2610510L13Rik; mKIAA0670; acinusS; ACN; C79325; Acinus	2610036I19Rik; acinusL; 2610510L13Rik; mKIAA0670; acinusS; ACN; C79325; Acinus
Mus musculus	RefSeq	ILMN_196693	ILMN_196693	C630001G20	XM_137515.3	XM_137515.3			38091550	XM_137515.3	C630001G20		ILMN_1236579	006980504	S	1092	TATCATCACTGTGGAGGTGCTGGGGCTGTCGGTGCAAGTCAGCTACCTGG										
Mus musculus	Riken	ILMN_207443	ILMN_207443	C230080E09RIK	ri|C230080E09|PX00667M15|AK082664|1910					AK082664	C230080E09Rik		ILMN_2587638	002750768	S	1842	GGGTGAATTTGACCTCAGCAGTCGTGTTCCTTTGTATCTTGAGTGCTGGC										
Mus musculus	RefSeq	ILMN_213792	ILMN_213792	A430083B19RIK	NM_177624.3	NM_177624.3		218739	142365087	NM_177624.3	A430083B19Rik	NP_808292.1	ILMN_1240287	003060736	S	632	GGCATCTCCTACTGAGTGTGGAATCACATTTATTCATTGATCATGAAATC	14	+	14515054-14515103	14qA1	Mus musculus RIKEN cDNA A430083B19 gene (A430083B19Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189598	ILMN_189598	9130020K20RIK	scl24814.1.910_53						9130020K20Rik		ILMN_2462678	005420528	S	8	AGGCAGTAGGTAGGGTTAATTGGTAGACTATCATGTACAGCCCTTTGGGT										
Mus musculus	Riken	ILMN_205876	ILMN_205876	MORF-PENDING	ri|E330017F13|PX00212E15|AK054340|4674					AK054340	Morf-pending		ILMN_2575872	006420598	S	3989	CAGTGATGTATGTAGTAGGGAAAGAGTTACTGCTGGATCTGTGAGCAGGG										
Mus musculus	RefSeq	ILMN_220915	ILMN_220915	2810417H13RIK	NM_026515.2	NM_026515.2		68026	71773931	NM_026515.2	2810417H13Rik	NP_080791.2	ILMN_1223045	007100301	S	1502	CGTGCTGCAAATCAGGTTTTATATGTCAGGTCCTTAGCATTTCCCCGTCA	9	+	65750473-65750522	9qC	Mus musculus RIKEN cDNA 2810417H13 gene (2810417H13Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			MGC29306; Ns5apt9; p15(PAF); Ns5atp9; mKIAA0101; AA409629	MGC29306; Ns5apt9; p15(PAF); Ns5atp9; mKIAA0101; AA409629
Mus musculus	RefSeq	ILMN_197963	ILMN_232865	EG632352	XR_001767.1	XR_001767.1		632352	94400078	XR_001767.1	EG632352		ILMN_1259041	004280753	S	798	AGGAGAGGCAGAAGGTGATGATGACGATGACGAAGAGAAGGAGGGGTTGG	16	+	15452711-15452760	16qA2	PREDICTED: Mus musculus predicted gene, EG632352 (EG632352), misc RNA.					
Mus musculus	RefSeq	ILMN_186717	ILMN_246721	PARG	NM_011960.2	NM_011960.2		26430	120444911	NM_011960.2	Parg	NP_036090.2	ILMN_1236495	003130100	S	4232	CCTATAATCGATGTCTGTGAGGCTAATCTGGAAACCAAAGCCAGTCTTAC	14	+	33110577-33110626	14qB	Mus musculus poly (ADP-ribose) glycohydrolase (Parg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IMP]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of poly(ADP-ribose) at glycosidic (1''-2') linkage of ribose-ribose bond to produce free ADP-ribose [goid 4649] [evidence IMP]		
Mus musculus	MEEBO	ILMN_220546	ILMN_220546	TJP3	scl0003765.1_1	NM_013769.1			7305582	NM_013769.1	Tjp3		ILMN_2723523	000520754	S	2124	CCCGGACTGACAGCCCATCCAAGATCATCAAACTGGACACAGTGCGGGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220370	ILMN_220370	2010106G01RIK	NM_023220.1	NM_023220.1		66552	12963584	NM_023220.1	2010106G01Rik	NP_075709.1	ILMN_1252689	003460477	S	1636	GGTACCTTGTACACTTATTACTGTCTCAGTCGTTGCTTGGAGTCGTAAGG	2	-	126730680-126730729	2qF1	Mus musculus RIKEN cDNA 2010106G01 gene (2010106G01Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	C130089K23Rik; Sppl2A	C130089K23Rik; Sppl2A
Mus musculus	RefSeq	ILMN_220370	ILMN_220370	2010106G01RIK	NM_023220.1	NM_023220.1		66552	12963584	NM_023220.1	2010106G01Rik	NP_075709.1	ILMN_2914347	004850646	S	1760	CCAGTGACGACTGATGAGCAGATTGTACAACAGTAATTACGTGGACTTAC	2	-	126719933-126719947:126719948-126719982	2qF1	Mus musculus RIKEN cDNA 2010106G01 gene (2010106G01Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	C130089K23Rik; Sppl2A	C130089K23Rik; Sppl2A
Mus musculus	RefSeq	ILMN_220370	ILMN_220370	2010106G01RIK	NM_023220.1	NM_023220.1		66552	12963584	NM_023220.1	2010106G01Rik	NP_075709.1	ILMN_1258638	000270450	S	349	GGACTACTGCATGTATTATAACAACAACTGGACACGACTTCCAAGTTCCC	2	-	126753495-126753544	2qF1	Mus musculus RIKEN cDNA 2010106G01 gene (2010106G01Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	C130089K23Rik; Sppl2A	C130089K23Rik; Sppl2A
Mus musculus	RefSeq	ILMN_215094	ILMN_215094	RNF126	NM_144528.1	NM_144528.1		70294	21362320	NM_144528.1	Rnf126	NP_653111.1	ILMN_1255277	005080408	S	1024	ACAAGCAACTCCTGAGTCCCACCTGGCCATCCCCCCCGGGGTTTGGTCAT	10	-	79221797-79221831:79221832-79221846	10qC1	Mus musculus ring finger protein 126 (Rnf126), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2610010O19Rik	2610010O19Rik
Mus musculus	RefSeq	ILMN_220830	ILMN_220830	PAF1	NM_019458.2	NM_019458.2		54624	31980911	NM_019458.2	Paf1	NP_062331.2	ILMN_2972371	006020228	S	1774	AAGCAGCAGCCTCTGATTCCAGTGAGGCTGACAGTGACAGTGATTGAGCC	7	+	28107964-28108010:28108011-28108013	7qA3	Mus musculus Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) (Paf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		FLJ11123; 5730511K23Rik; MGC102062; AA675045	FLJ11123; 5730511K23Rik; MGC102062; AA675045
Mus musculus	RefSeq	ILMN_220830	ILMN_220830	PAF1	NM_019458.2	NM_019458.2		54624	31980911	NM_019458.2	Paf1	NP_062331.2	ILMN_2972372	000510110	S	1650	AATGACTCGGACAGTGGCAGTGATGGTGGTGGCCAGAGGAGCCGCAGCCA	7	+	28107840-28107889	7qA3	Mus musculus Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) (Paf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		FLJ11123; 5730511K23Rik; MGC102062; AA675045	FLJ11123; 5730511K23Rik; MGC102062; AA675045
Mus musculus	MEEBO	ILMN_222753	ILMN_222753	2610034B18RIK	scl31139.6_479	XM_133556.2			28479557	XM_133556.2	2610034B18Rik		ILMN_1242814	006650703	S	2089	GAGGGAGGACAGGGATTACTGATCCGACTTCATGGTTCAAACTCAATGAC										
Mus musculus	Riken	ILMN_201619	ILMN_201619	0910001L17RIK	ri|0910001L17|R000005H17|AK003089|1083					AK003089	0910001L17Rik		ILMN_1228955	004050747	S	834	TCACTCCAGCAGTCCTGACCCTGTTTGAAGTGTAGGAGGAGGAAGCGCCC										
Mus musculus	RefSeq	ILMN_211940	ILMN_211940	CXXC1	NM_028868.1	NM_028868.1		74322	18390324	NM_028868.1	Cxxc1	NP_083144.1	ILMN_2898135	000070577	S	2199	ACGATCCAACACGATCCACTCACTACCGACCTTCGCTCTAGTGCCGACCG	18	+	74346522-74346571	18qE2	Mus musculus CXXC finger 1 (PHD domain) (Cxxc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5830420C16Rik; Cgbp; 2410002I16Rik; PHF18; AI426635	5830420C16Rik; Cgbp; 2410002I16Rik; PHF18; AI426635
Mus musculus	MEEBO	ILMN_211627	ILMN_211627	GLE1L	scl21103.16.1_274	XM_130106.3			38074602	XM_130106.3	Gle1l		ILMN_2617810	000360497	S	2514	CTCCACACTGCCCCACTGTTCATACACATACTGAGAAAGAATAAACCGCC										
Mus musculus	RefSeq	ILMN_223445	ILMN_228761	RDH13	NM_175372.3	NM_175372.3		108841	52345421	NM_175372.3	Rdh13	NP_780581.1	ILMN_2764201	004760685	S	2610	AAACAGCTGATTCATAGATTTAAAATAAAAATGTTTATTTAGAGTGTGAG	7	-	4377603-4377652	7qA1	Mus musculus retinol dehydrogenase 13 (all-trans and 9-cis) (Rdh13), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	8430425D21Rik	8430425D21Rik
Mus musculus	RefSeq	ILMN_212025	ILMN_236379	0910001L09RIK	NM_001081108.1	NM_001081108.1		66096	124487392	NM_001081108.1	0910001L09Rik	NP_001074577.1	ILMN_2621882	006550632	S	448	ACCTTCTGCTGTCCTTGCTGGAGTTGGGCTTGTGCTCACTACCTCCTTCC	5	+	138700443-138700492	5qG2	Mus musculus RIKEN cDNA 0910001L09 gene (0910001L09Rik), mRNA.				AV006840	AV006840
Mus musculus	MEEBO	ILMN_187117	ILMN_187117	8430438L13RIK	scl33702.7_365				27370111	NM_172756	8430438L13Rik		ILMN_2441303	002850017	S	12	GCACTGAAGAGTTCCAAACTGACTGTGGGGAAGTGGTGGGAGAGTGCACA										
Mus musculus	Riken	ILMN_207027	ILMN_207027	A830029A02RIK	ri|A830029A02|PX00661B04|AK080623|456					AK080623	A830029A02Rik		ILMN_2584496	002340014	S	91	GCACCCCAAGACCAGGAAACGTCATCTGTACTGCACCTTCTCTTCAGGCT										
Mus musculus	RefSeq	ILMN_240301	ILMN_240301	OLFR605	NM_001011854.1	NM_001011854.1		258156	58801465	NM_001011854.1	Olfr605	NP_001011854.1	ILMN_3160282	006370195	S	603	CCTCAGTGTGGCCTCTGTCATTGGTTCTTGTGATGGCTTCTTCATTGCCC	7	-	110590983-110591032	7qE3	Mus musculus olfactory receptor 605 (Olfr605), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR24-5; MOR202-22P	MOR24-5; MOR202-22P
Mus musculus	Riken	ILMN_205645	ILMN_205645	9930013C11RIK	ri|9930013C11|PX00119F14|AK036806|3788					AK036806	9930013C11Rik		ILMN_1235279	007510327	S	3602	ATGGAAGTCCCCCAGTGAAGCACTTTAGAGGGGCTAGAGAAGAGTCTGTC										
Mus musculus	RefSeq	ILMN_197301	ILMN_320502	GM807	XR_035362.1	XR_035362.1		328320	149264595	XR_035362.1	Gm807		ILMN_2527642	004150136	S	235	CCCTCCTTGGCTTAGATCATGGGTGGGACAGAGGAAGGGACATGACACAG					PREDICTED: Mus musculus gene model 807, (NCBI) (Gm807), misc RNA.					
Mus musculus	RefSeq	ILMN_212457	ILMN_212457	FXC1	NM_019502.2	NM_019502.2		14356	31982715	NM_019502.2	Fxc1	NP_062375.1	ILMN_2684874	003420164	S	107	AATCGGATGACAGAACTGTGTTTCCAGCGCTGTGTGCCCAGCCTGCACCA	7	+	112789299-112789348	7qE3	Mus musculus fractured callus expressed transcript 1 (Fxc1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Tim10b; Timm10b; Tim9b	Tim10b; Timm10b; Tim9b
Mus musculus	RefSeq	ILMN_212457	ILMN_212457	FXC1	NM_019502.2	NM_019502.2		14356	31982715	NM_019502.2	Fxc1	NP_062375.1	ILMN_2626653	003440400	S	302	GGCCGCGCCAGGTATTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCA	7	+	112789664-112789713	7qE3	Mus musculus fractured callus expressed transcript 1 (Fxc1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Tim10b; Timm10b; Tim9b	Tim10b; Timm10b; Tim9b
Mus musculus	RefSeq	ILMN_212457	ILMN_212457	FXC1	NM_019502.2	NM_019502.2		14356	31982715	NM_019502.2	Fxc1	NP_062375.1	ILMN_2824723	003420632	S	833	GGAAGAAAACTCTACCCCCTTAGGCTTTAGCCACTGCTTCCTAGGAGGTC	7	+	112790195-112790244	7qE3	Mus musculus fractured callus expressed transcript 1 (Fxc1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Tim10b; Timm10b; Tim9b	Tim10b; Timm10b; Tim9b
Mus musculus	RefSeq	ILMN_213773	ILMN_213773	OLFR1099	NM_146768.1	NM_146768.1		258764	22129310	NM_146768.1	Olfr1099	NP_666979.1	ILMN_2640625	004290671	S	750	ATTTTATGGTACTATGATCTTCACCCATTTAAAATCAAATAAGTCTTTCT	2	-	86798814-86798863	2qD	Mus musculus olfactory receptor 1099 (Olfr1099), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR206-3	MOR206-3
Mus musculus	RefSeq	ILMN_215699	ILMN_215699	ARL5C	NM_207231.1	NM_207231.1		217151	46402216	NM_207231.1	Arl5c	NP_997114.1	ILMN_2943057	002850148	S	1156	CCCTATCCACTGGACGAAGGAGATTCCGATAAAGGAGGCAATAGGACCCG	11	-	97851249-97851298	11qD	Mus musculus ADP-ribosylation factor-like 5C (Arl5c), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Arl12; MGC73657; BC065791	Arl12; MGC73657; BC065791
Mus musculus	MEEBO	ILMN_184405	ILMN_184405	6720427H10RIK	scl44354.1.1_177						6720427H10Rik		ILMN_2418366	006180435	S	2	GGGAAGAGCCACTGACCCCGAGACCAATTTCCAGGCAGCTGCACAAACTA										
Mus musculus	RefSeq	ILMN_219135	ILMN_251988	4933434I06RIK	NM_027728.2	NM_027728.2		71233	124378031	NM_027728.2	4933434I06Rik	NP_082004.1	ILMN_1216601	006110259	S	986	GCCAACTGTTGCAGGACAGAAAAAAGCCACATGGCCATCACACTAAACCC	2	-	21102521-21102570	2qA3	Mus musculus RIKEN cDNA 4933434I06 gene (4933434I06Rik), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]		Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	AU016229; MGC117794	AU016229; MGC117794
Mus musculus	RefSeq	ILMN_219576	ILMN_219576	FGF21	NM_020013.4	NM_020013.4		56636	146134956	NM_020013.4	Fgf21	NP_064397.1	ILMN_2710698	006290743	S	767	CTGAGCATGGTAGAGCCTTTACAGGGCCGAAGCCCCAGCTATGCGTCCTG				7qB4	Mus musculus fibroblast growth factor 21 (Fgf21), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	Riken	ILMN_204941	ILMN_204941	RANBP2	ri|D230030L04|PX00189M04|AK051984|2275					AK051984	Ranbp2		ILMN_1256270	006580468	S	1541	GGCCTTTTGGACCAGCATCCCTACCTCACAACCTGAGAGCAAAGGTATAG						Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199396	ILMN_199396	OLFR1270	NM_146985.1	NM_146985.1		258987	22128966	NM_146985.1	Olfr1270	NP_667196.1	ILMN_2639417	007610242	S	551	AGCTGGCTTGCACTGATACATTTGTGGAGAGTGTCATTGTAATGGCCAAT	2	-	89989561-89989610	2qE1	Mus musculus olfactory receptor 1270 (Olfr1270), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR227-1	MOR227-1
Mus musculus	RefSeq	ILMN_201762	ILMN_217322	1700025D03RIK	NM_026469.2	NM_026469.2		67944	125347369	NM_026469.2	1700025D03Rik	NP_080745.2	ILMN_1222335	004200095	S	581	GAGACCTACTGAGACTGAAGATCCTCCAAGCAGAGCTGAGGGCTCTCCCG	X	-	134743390-134743408:134743508-134743538	XqF1	Mus musculus RIKEN cDNA 1700025D03 gene (1700025D03Rik), mRNA.				RP23-149B17.1	RP23-149B17.1
Mus musculus	RefSeq	ILMN_217322	ILMN_217322	1700025D03RIK	NM_026469.2	NM_026469.2		67944	125347369	NM_026469.2	1700025D03Rik	NP_080745.2	ILMN_1255543	004780719	S	1175	CAGCATTCCGTAGGCCTGGGGATTGGGACTGTCCTTGGTGTAAAGCTGTG	X	-	134742796-134742845	XqF1	Mus musculus RIKEN cDNA 1700025D03 gene (1700025D03Rik), mRNA.				RP23-149B17.1	RP23-149B17.1
Mus musculus	RefSeq	ILMN_210415	ILMN_210415	COX6A1	NM_007748.3	NM_007748.3		12861	118131168	NM_007748.3	Cox6a1	NP_031774.1	ILMN_2638875	001510133	S	211	ACGAGAGACCCCCGTTCGTTGCCTACCCTCACCTGCGCATCAGGACCAAG	5	-	115795935-115795935:115798574-115798622	5qF	Mus musculus cytochrome c oxidase, subunit VI a, polypeptide 1 (Cox6a1), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	VIaL	VIaL
Mus musculus	RefSeq	ILMN_217741	ILMN_217741	APBB2	NM_009686.1	NM_009686.1		11787	33468878	NM_009686.1	Apbb2	NP_033816.1	ILMN_2850450	003060754	S	2830	CCAGACAGTGTTAGACAAGCATGTGACCTCGTCTTGCCGCCACCATGTGA	5	-	66693609-66693658	5qC3.1	Mus musculus amyloid beta (A4) precursor protein-binding, family B, member 2 (Apbb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of S phase of mitotic cell cycle activity [goid 45749] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IDA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence NAS]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IDA]; Interacting selectively with the enzyme histone acetyltransferase [goid 35035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Zfra; FE65L1; TR2L; 2310007D03Rik; Rirl1	Zfra; FE65L1; TR2L; 2310007D03Rik; Rirl1
Mus musculus	RefSeq	ILMN_215080	ILMN_255546	6030458C11RIK	NM_029998.2	NM_029998.2		77877	142381499	NM_029998.2	6030458C11Rik	NP_084274.1	ILMN_1234301	002260148	S	3523	AGGGTTTCAGGTCAAACTATAGAACTAATTCTTCTTCGTGTCAGTGCATG	15	-	12738317-12738366	15qA1	Mus musculus RIKEN cDNA 6030458C11 gene (6030458C11Rik), mRNA.				MGC118638	MGC118638
Mus musculus	RefSeq	ILMN_217598	ILMN_217598	ZFP828	NM_181854.1	NM_181854.1		101994	32469496	NM_181854.1	Zfp828	NP_862902.1	ILMN_2685309	004200324	S	2467	CGGCATAATGAAGAGGTGAATAAGAAGCTGATGGAAGCCCTGGAGTCGCC	8	+	13880181-13880230	8qA1.1	Mus musculus zinc finger protein 828 (Zfp828), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D8Ertd569e; mKIAA1802; AI116001	D8Ertd569e; mKIAA1802; AI116001
Mus musculus	RefSeq	ILMN_188271	ILMN_188271	TMEM30B	NM_178715.3	NM_178715.3		238257	142371461	NM_178715.3	Tmem30b	NP_848830.1	ILMN_2451248	004180400	S	2895	GAGACCATGAAACTTAAAATCCTGTCATTAAATTGTAGTTCCAGGCCTTG	12	-	74644438-74644487	12qC3	Mus musculus transmembrane protein 30B (Tmem30b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9130011B11Rik	9130011B11Rik
Mus musculus	Riken	ILMN_204803	ILMN_204803	4732450N03RIK	ri|4732450N03|PX00051M21|AK028741|3120					AK028741	4732450N03Rik		ILMN_2567735	005910377	S	2425	AAGCAGCACAGTGGCAGGGTTGGAGGGTCTTGTCTCAGGGTGCTCTGTCA										
Mus musculus	RefSeq	ILMN_218906	ILMN_218906	NDST3	NM_031186.2	NM_031186.2		83398	71043952	NM_031186.2	Ndst3	NP_112463.2	ILMN_1258457	003830450	S	2520	ACAAAATGCCTTGGGAAGAGTAAAGGAAGAAAATACCCCCCGATGGACTC	3	-	123234005-123234054	3qG1	Mus musculus N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 (Ndst3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-desulfoheparin = adenosine 3',5'-bisphosphate + heparin [goid 15016] [evidence IEA]	MGC90637; 4921531K01Rik; 4930511P15Rik	MGC90637; 4921531K01Rik; 4930511P15Rik
Mus musculus	RefSeq	ILMN_208831	ILMN_208831	5730449L18RIK	NM_025677.1	NM_025677.1		66637	13385137	NM_025677.1	5730449L18Rik	NP_079953.1	ILMN_2835012	005080110	S	867	CAGTGCCTCTGCCATCCCACGTAGTCGATAGACAGGTATCAGTGAGTGGT	1	-	154133169-154133218	1qG3	Mus musculus RIKEN cDNA 5730449L18 gene (5730449L18Rik), mRNA.				AL023077	AL023077
Mus musculus	RefSeq	ILMN_208831	ILMN_208831	5730449L18RIK	NM_025677.1	NM_025677.1		66637	13385137	NM_025677.1	5730449L18Rik	NP_079953.1	ILMN_2616000	002450427	S	960	CGTGGTCATGGGTGTGAATGACACGCCAGGCTATGAAAGTGACAATCAGA	1	-	154133076-154133125	1qG3	Mus musculus RIKEN cDNA 5730449L18 gene (5730449L18Rik), mRNA.				AL023077	AL023077
Mus musculus	MEEBO	ILMN_195812	ILMN_195812	TRGV6_D29793_T_CELL_RECEPTOR_GAMMA_VARIABLE_6_95	TRGV6_D29793_T_cell_receptor_gamma_variable_6_95						TRGV6_D29793_T_cell_receptor_gamma_variable_6_95		ILMN_1219516	002260537	S	1	GGGAACGAGTCTCACGTCACCTCTGGGGTCATATGTCATCAAGAGGAAAG										
Mus musculus	RefSeq	ILMN_259592	ILMN_259592	TDPOZ4	NM_207272.1	NM_207272.1		399675	46402294	NM_207272.1	Tdpoz4	NP_997155.1	ILMN_2860432	002120270	S	991	ATGGTGGAGTCACATCCCCGCTTGGTGGCTGAAGCATTTCACTCTCTGGC	3	+	93882792-93882841	3qF2.1	Mus musculus TD and POZ domain containing 4 (Tdpoz4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_200154	ILMN_200154	LOC385817	XM_358957.1	XM_358957.1			38080722	XM_358957.1	LOC385817		ILMN_1225175	001470059	S	145	GGGCAGAGTGAGGTCAGGGTGAATGTCAGGAGTAAGAATGGCACTGTGTC										
Mus musculus	RefSeq	ILMN_215539	ILMN_215539	RHBDF2	NM_172572.2	NM_172572.2		217344	141802637	NM_172572.2	Rhbdf2	NP_766160.1	ILMN_1221129	004920113	S	3474	GCATTGTGGGGAAGGCTCTGGCTGTTGTCTATGGGGGATGACAAGCAAGG	11	-	116459814-116459863	11qE2	Mus musculus rhomboid 5 homolog 2 (Drosophila) (Rhbdf2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			4732465I17Rik; Rhbdl6	4732465I17Rik; Rhbdl6
Mus musculus	RefSeq	ILMN_214372	ILMN_214372	NFATC4	NM_023699.2	NM_023699.2		73181	45504364	NM_023699.2	Nfatc4	NP_076188.2	ILMN_2647331	006860288	S	2949	CTGGAGGCCAGAACTGACTGGGCTGAACATGATGTCCTGATCGTGCAGGC	14	+	56452675-56452724	14qC3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 (Nfatc4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	3110041H08Rik; Nfat3; AW107667; AW546455	3110041H08Rik; Nfat3; AW107667; AW546455
Mus musculus	MEEBO	ILMN_209521	ILMN_209521	E330032C10	scl0328855.4_19				51770395	XM_488836	E330032C10		ILMN_1246765	004280689	S	1934	CAGAGAGAAGACATTTCTAATGAAGTGTGACTATCTAGTCAGTGGTGACC										
Mus musculus	RefSeq	ILMN_196368	ILMN_196368	ABCA15	NM_177213.3	NM_177213.3		320631	46358377	NM_177213.3	Abca15	NP_796187.2	ILMN_2598661	004220347	S	2334	CATTGCTATCATGGTCAGGGGGACCTTACGATGTTGCGGCTCCTCGGTCT	7	+	127505002-127505051	7qF2	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 15 (Abca15), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4930500I12Rik	4930500I12Rik
Mus musculus	RefSeq	ILMN_196368	ILMN_196368	ABCA15	NM_177213.3	NM_177213.3		320631	46358377	NM_177213.3	Abca15	NP_796187.2	ILMN_3001770	006130376	S	5256	CCTACATCTGGGTCCATGGGAAGGTCATCCTGTGCTTGTGAATCTTCATG	7	+	127551122-127551171	7qF2	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 15 (Abca15), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4930500I12Rik	4930500I12Rik
Mus musculus	RefSeq	ILMN_196368	ILMN_196368	ABCA15	NM_177213.3	NM_177213.3		320631	46358377	NM_177213.3	Abca15	NP_796187.2	ILMN_1218537	000020743	S	5149	GCCGACCAAGACAGGAAGTGATTATGAGACAGAGGTTCCTTGAGATTCCG	7	+	127551015-127551035:127551036-127551064	7qF2	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 15 (Abca15), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4930500I12Rik	4930500I12Rik
Mus musculus	RefSeq	ILMN_196368	ILMN_196368	ABCA15	NM_177213.3	NM_177213.3		320631	46358377	NM_177213.3	Abca15	NP_796187.2	ILMN_2598660	007210450	S	2332	GCATTGCTATCATGGTCAGGGGGACCTTACGATGTTGCGGCTCCTCGGTC	7	+	127505000-127505049	7qF2	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 15 (Abca15), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4930500I12Rik	4930500I12Rik
Mus musculus	MEEBO	ILMN_215028	ILMN_215028	1700007K09RIK	scl30594.4.1_7	XM_133875.1			20844708	XM_133875.1	1700007K09Rik		ILMN_2654710	000150400	S	559	ATATTTTCTTACTCAAGCCATTTCTATAGTGTTTATGTTGTATACTATCT										
Mus musculus	MEEBO	ILMN_190082	ILMN_190082	BBX	scl48409.23_594				18378726	NM_027444	Bbx		ILMN_1222069	004860154	S	20	TTTCTTAGCCTTGAGTGACCAAGAAGAATTTGCTTGGGGCAAATTGTGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210906	ILMN_210906	CDK6	NM_009873.2	NM_009873.2		12571	133892426	NM_009873.2	Cdk6	NP_034003.1	ILMN_1259714	001940121	S	2192	CCGAATGCTTTGGGCGTAGGCTCCCATTCCGAAACCCTAACAGTATCCCC	5	+	3521947-3521996	5qA1	Mus musculus cyclin-dependent kinase 6 (Cdk6), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Crk2; 5830411I20; AI504062	Crk2; 5830411I20; AI504062
Mus musculus	Riken	ILMN_207131	ILMN_207131	CD33	ri|F630037H21|PL00002I06|AK089205|2378					AK089205	Cd33		ILMN_2585267	005490022	S	2203	TGGATTGCTTTGTTCCCTGTGATGTGGGCAGCGAGAGACTGTTCTGTCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188943	ILMN_254124	SLC16A5	NM_001080934.1	NM_001080934.1		217316	124286851	NM_001080934.1	Slc16a5	NP_001074403.1	ILMN_2461172	002100441	S	2775	CCGTGCATTTGCTGAGTTGCTTATGTTCACTGTCTCTAGACCTTGGGTGG	11	+	115335467-115335516	11qE2	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 5 (Slc16a5), mRNA.				MCT5; A130015N09Rik	MCT5; A130015N09Rik
Mus musculus	RefSeq	ILMN_188943	ILMN_254124	SLC16A5	NM_001080934.1	NM_001080934.1		217316	124286851	NM_001080934.1	Slc16a5	NP_001074403.1	ILMN_1237289	001400711	S	1069	GGCGATCCTCATCAACGGGCTCACCAATCTAATATGCACGGTGTCAGCCG	11	+	115331239-115331288	11qE2	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 5 (Slc16a5), mRNA.				MCT5; A130015N09Rik	MCT5; A130015N09Rik
Mus musculus	RefSeq	ILMN_192739	ILMN_317334	LOC100039120	XM_001472427.1	XM_001472427.1		100039120	149271250	XM_001472427.1	LOC100039120	XP_001472477.1	ILMN_1214597	006900544	S	575	CAAGAAGCATTAAAACTGTCCGAATGTAGTCAGAGTCAGACCCTGGAAGC	X	-	26100443-26100492	XqA2	PREDICTED: Mus musculus similar to Xlr-related, meiosis regulated, transcript variant 1 (LOC100039120), mRNA.					
Mus musculus	RefSeq	ILMN_219360	ILMN_219360	MLLT1	NM_022328.2	NM_022328.2		64144	31981230	NM_022328.2	Mllt1	NP_071723.1	ILMN_2756121	000150397	S	1577	TGGAGCTGCACCGGAGACTGATGGCTCTGCGCGAGCGCAATGTGCTGCAG	17	-	57034092-57034141	17qD	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 (Mllt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ENL; AA407901; LTG19; BAM11	ENL; AA407901; LTG19; BAM11
Mus musculus	RefSeq	ILMN_219360	ILMN_219360	MLLT1	NM_022328.2	NM_022328.2		64144	31981230	NM_022328.2	Mllt1	NP_071723.1	ILMN_2976250	001300521	S	3386	GACACTGAGTGCAAAAGGTATTGGATACCTATCCCTCCCCAGGGCTTCAC	17	-	57032207-57032256	17qD	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 (Mllt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ENL; AA407901; LTG19; BAM11	ENL; AA407901; LTG19; BAM11
Mus musculus	RefSeq	ILMN_219360	ILMN_219360	MLLT1	NM_022328.2	NM_022328.2		64144	31981230	NM_022328.2	Mllt1	NP_071723.1	ILMN_2707666	000990369	S	2644	TCGGTGTTTGTGCCCCAACCAAGGTGTTTGAAAGAGGCCTGAGCTGAAGC	17	-	57032949-57032998	17qD	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 (Mllt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ENL; AA407901; LTG19; BAM11	ENL; AA407901; LTG19; BAM11
Mus musculus	RefSeq	ILMN_200243	ILMN_200243	LOC386056	XM_359046.1	XM_359046.1			38081059	XM_359046.1	LOC386056		ILMN_1221535	000610754	S	332	GGAAAGGGCCAGGCACAGGCTCGGGAATGCCTTTTGGGGCAGAAACAGCA										
Mus musculus	RefSeq	ILMN_196779	ILMN_196779	AY358078	NM_194347.1	NM_194347.1		278676	39930560	NM_194347.1	AY358078	NP_919328.1	ILMN_2525771	002100709	S	912	CTTACACCTGCAAGTTGTGTATGAGGGAGATCTTGACCTGGTCTGTGCCC	14	+	52440033-52440046:52441808-52441843	14qC2	Mus musculus cDNA sequence AY358078 (AY358078), mRNA.					
Mus musculus	Riken	ILMN_203044	ILMN_203044	9930108M23RIK	ri|9930108M23|PX00062M08|AK037073|3383					AK037073	9930108M23Rik		ILMN_1250654	005570717	S	2616	GGTTCCTGGGGAGCCTATGAGAGAAAAGTTTGATACCCAGGAAGATGAGA										
Mus musculus	MEEBO	ILMN_192801	ILMN_192801	PELI2	scl46390.1.1_198				15809019	NM_033602	Peli2		ILMN_2491462	006040402	S	12	ATCTGTCACTGGCTTTACGGGGACGCTCGGTAGGACATGGATGCAAACCT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200921	ILMN_312644	LOC100046503	XR_032393.1	XR_032393.1		100046503	149271924	XR_032393.1	LOC100046503		ILMN_2540475	005310241	S	665	GACTGGGCTGGCTGAGGACGATCAGCTGAAGGCTCATGGGTTTAAGTGCT					PREDICTED: Mus musculus similar to suppressor of initiator codon mutations, related sequence 1 (LOC100046503), misc RNA.					
Mus musculus	MEEBO	ILMN_210510	ILMN_210510	B130008E12RIK	scl071590.1_147	XM_137316.4			38090693	XM_137316.4	B130008E12Rik		ILMN_2606345	006450735	S	5597	GACGTCAGTGACGTTGACAATAAGATAACTAGTTATATCACTTTGTTTAA										
Mus musculus	Riken	ILMN_204667	ILMN_204667	9430073L23RIK	ri|9430073L23|PX00110A03|AK035013|2838					AK035013	9430073L23Rik		ILMN_2566727	005080437	S	2484	GCTTAATGGAGCTTTCTCCTCCAGTCTCACTCGACCTGGGGTATGGAAGT										
Mus musculus	MEEBO	ILMN_184839	ILMN_184839	C330006D17RIK	scl077616.1_186						C330006D17Rik		ILMN_2422023	006380653	S	6	CAGACTACCTTTCCACTATTTATGGTGCCTTTTGTCTCCAGTGAAGTGCA										
Mus musculus	RefSeq	ILMN_223901	ILMN_259560	LBP	NM_008489.2	NM_008489.2		16803	113865990	NM_008489.2	Lbp	NP_032515.2	ILMN_2771237	004200341	S	1660	GGACCGGCCATTTGTAATTCCAGATGTACAGCACATCTCTGGAGAGTCTC	2	+	158157723-158157772	2qH1	Mus musculus lipopolysaccharide binding protein (Lbp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The process by which a microorganism (or other particulate material) is rendered more susceptible to phagocytosis by coating with an opsonin, a blood serum protein such as a complement component or antibody [goid 8228] [evidence IC ]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IDA]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response [goid 2281] [evidence IDA]; Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism [goid 50829] [evidence IMP]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IMP]; Any process that increases the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 60265] [evidence IMP]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; Interacting selectively with any component on the surface of a Gram-positive bacterium [goid 51637] [evidence IDA]; Interacting selectively with lipopolysaccharide [goid 1530] [evidence IDA]	Ly88	Ly88
Mus musculus	RefSeq	ILMN_186006	ILMN_233714	FAM13B	NM_146084.1	NM_146084.1		225358	22122578	NM_146084.1	Fam13b	NP_666196.1	ILMN_2723513	006550577	S	3235	GGAAACACGCAGGCTCCTTCATTGTTTTACTGCAGACACGGCTGTTAGCA	18	-	34602064-34602113	18qB1	Mus musculus family with sequence similarity 13, member B (Fam13b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AW546153; AW060714; MGC37079	AW546153; AW060714; MGC37079
Mus musculus	RefSeq	ILMN_186006	ILMN_233714	FAM13B	NM_146084.1	NM_146084.1		225358	22122578	NM_146084.1	Fam13b	NP_666196.1	ILMN_1245256	003420086	S	3145	GGCACTCAGAGAGTCCCATTGTGTGCTTGTTTGTGGTTCCAGTAGGCAAG	18	-	34602154-34602203	18qB1	Mus musculus family with sequence similarity 13, member B (Fam13b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AW546153; AW060714; MGC37079	AW546153; AW060714; MGC37079
Mus musculus	RefSeq	ILMN_209166	ILMN_233714	FAM13B	NM_146084.1	NM_146084.1		225358	22122578	NM_146084.1	Fam13b	NP_666196.1	ILMN_1244948	001450221	S	3195	CCTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTGAGTGC	18	-	34602104-34602153	18qB1	Mus musculus family with sequence similarity 13, member B (Fam13b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AW546153; AW060714; MGC37079	AW546153; AW060714; MGC37079
Mus musculus	Riken	ILMN_202760	ILMN_202760	4930558P17RIK	ri|4930558P17|PX00035P08|AK019776|2563					AK019776	4930558P17Rik		ILMN_1229373	006840315	S	2399	GCCCAACCTAGTGTCACAGGCCTGTAGCCCCAGTATTCAAGAGTCTGAGG										
Mus musculus	RefSeq	ILMN_219637	ILMN_219637	IAPP	NM_010491.1	NM_010491.1		15874	6754271	NM_010491.1	Iapp	NP_034621.1	ILMN_2996479	006580474	S	548	TGATCAAGTTCAGAGTGAAGTCAATGTCTCTAATCACACATGTTCTTGCT	6	+	142252195-142252244	6qG2	Mus musculus islet amyloid polypeptide (Iapp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IGI]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	amylin	amylin
Mus musculus	MEEBO	ILMN_224024	ILMN_224024	ALOX5AP	scl26949.8.1_14				33563241	NM_009663	Alox5ap		ILMN_1215791	003800372	S	417	TCCTGTTCCTCATGTCCTTCGCCGGGATACTCAACCATTACCTCATCTTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]	Increases the activity of an enzyme [goid 8047] [evidence IEA]		
Mus musculus	RefSeq	ILMN_257656	ILMN_257656	B020018G12RIK	NM_001039518.1	NM_001039518.1		545388	91064864	NM_001039518.1	B020018G12Rik	NP_001034607.1	ILMN_2805207	005090204	S	744	GTTGACTGGGTGGGTCTCTCTACAAGTCCATTTGGTTATGCTGCCTTGGA	1	-	177908454-177908503	1qH4	Mus musculus RIKEN cDNA B020018G12 gene (B020018G12Rik), mRNA.				Y14	Y14
Mus musculus	MEEBO	ILMN_217531	ILMN_217531	IGK-C	scl0016071.1_62	XM_132633.4			38084525	XM_132633.4	Igk-C		ILMN_2684370	000630730	S	894	GACAGCACCTACAGCATGAGCAGCACCCTCACGTTGACCAAGGACGAGTA										
Mus musculus	MEEBO	ILMN_212054	ILMN_212054	4632404M16RIK	scl22806.1.3_180	XM_149359.1			20875064	XM_149359.1	4632404M16Rik		ILMN_2622227	005260543	S	2679	GATGAAAGGTTTGCCACGCGGCGTTTCTACATGAGCGCGTGCTGGATGGA										
Mus musculus	RefSeq	ILMN_200445	ILMN_200445	LOC384294	XM_357550.1	XM_357550.1			38081977	XM_357550.1	LOC384294		ILMN_1228556	006480722	S	330	GTCCTCCAAGACTGACCTTATTACCCCCACTTTCGGCTACGCAGTGGAAG										
Mus musculus	RefSeq	ILMN_212069	ILMN_212069	LCP1	NM_008879.3	NM_008879.3		18826	118130633	NM_008879.3	Lcp1	NP_032905.2	ILMN_1216871	001470711	S	2748	CCCTGTGAGTCTGTGAGTTTGCTCCATTCCCCTCAGAACCATACCTGTGG	14	+	75629649-75629698	14qD3	Mus musculus lymphocyte cytosolic protein 1 (Lcp1), mRNA.	A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome [goid 1891] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence ISO]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	L-fimbrin; Pls2; D14Ertd310e; AW536232	L-fimbrin; Pls2; D14Ertd310e; AW536232
Mus musculus	RefSeq	ILMN_186178	ILMN_236003	KLF5	NM_009769.4	NM_009769.4		12224	145966754	NM_009769.4	Klf5	NP_033899.2	ILMN_1253387	006940379	S	1581	TGTGCCAACGCAGCTTCTCCCGCTCCGACCACCTCGCGCTGCACATGAAG				14qE2.2	Mus musculus Kruppel-like factor 5 (Klf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell [goid 30033] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	4930520J07Rik; CKLF; IKLF; Bteb2	4930520J07Rik; CKLF; IKLF; Bteb2
Mus musculus	RefSeq	ILMN_220532	ILMN_220532	HBB-Y	NM_008221.2	NM_008221.2		15135	31982291	NM_008221.2	Hbb-y	NP_032247.1	ILMN_3141257	003060397	A	226	GGCAACCCAAGGGTCAAAGCCCATGGCAAGAAGGTGCTGACTGCTTTTGG	7	-	103726663-103726712	7qE3	Mus musculus hemoglobin Y, beta-like embryonic chain (Hbb-y), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IEA]	The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	Ey; Hby	Ey; Hby
Mus musculus	RefSeq	ILMN_220532	ILMN_220532	HBB-Y	NM_008221.2	NM_008221.2		15135	31982291	NM_008221.2	Hbb-y	NP_032247.1	ILMN_2723322	001440164	S	242	AGCCCATGGCAAGAAGGTGCTGACTGCTTTTGGAGAGTCCATTAAGAATC	7	-	103726647-103726696	7qE3	Mus musculus hemoglobin Y, beta-like embryonic chain (Hbb-y), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IEA]	The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	Ey; Hby	Ey; Hby
Mus musculus	RefSeq	ILMN_237385	ILMN_237385	E530011F12RIK	NM_001034898.1	NM_001034898.1		545279	85702257	NM_001034898.1	E530011F12Rik	NP_001030070.1	ILMN_3055567	006330168	I	1560	TGCAGAGGAGACTGAACCACTCCATACTCCCCCAACCCTGCCTGAAAAGC	19	-	11045455-11045504	19qA	Mus musculus RIKEN cDNA E530011F12 gene (E530011F12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_237385	ILMN_237385	E530011F12RIK	NM_001034898.1	NM_001034898.1		545279	85702257	NM_001034898.1	E530011F12Rik	NP_001030070.1	ILMN_3132346	004900170	A	664	GGTGCCAAGCCACCCGTGCTCAAACTAACGCATCTGTGATTTTCCTACCC	19	-	11046351-11046370:11047144-11047173	19qA	Mus musculus RIKEN cDNA E530011F12 gene (E530011F12Rik), mRNA.					
Mus musculus	MEEBO	ILMN_214235	ILMN_214235	1700082M22RIK	scl33436.2.1_0	NM_028564.1			13386323	NM_028564.1	1700082M22Rik		ILMN_1221221	007330603	S	1880	GCATCATATTCTGTCAACCTACATTGTATGCAATTACTAAAATTGCAGGG										
Mus musculus	RefSeq	ILMN_215029	ILMN_215029	1700025F22RIK	NM_027074.3	NM_027074.3		69416	146141118	NM_027074.3	1700025F22Rik	NP_081350.1	ILMN_2654732	004250301	S	571	CACCTTGGAAAGTGGTATTTTATCAAGTCTTCCTCAGCATTTCATCTCCT				19qA	Mus musculus RIKEN cDNA 1700025F22 gene (1700025F22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_238860	ILMN_238860	ZFP382	NM_001081007.1	NM_001081007.1		233060	124486593	NM_001081007.1	Zfp382	NP_001074476.1	ILMN_2987207	003610452	S	1656	CCCCAGTGTGGGAAAGCCTTCAGTAGGAAATCGAACCTCATTCGCCACCA	7	+	30919514-30919563	7qB1	Mus musculus zinc finger protein 382 (Zfp382), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Znf382; 5930415A09Rik	Znf382; 5930415A09Rik
Mus musculus	RefSeq	ILMN_209814	ILMN_209814	ELK4	NM_007923.1	NM_007923.1		13714	6679632	NM_007923.1	Elk4	NP_031949.1	ILMN_2940961	000290181	S	1138	CAGTGGCTTCTCAGCCAATGGAACTTCCAGAGAACTTATCACTGGAGCCT	1	+	133914817-133914866	1qE4	Mus musculus ELK4, member of ETS oncogene family (Elk4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	A130026I01Rik; 2310011G17Rik; Sap1; BB162516	A130026I01Rik; 2310011G17Rik; Sap1; BB162516
Mus musculus	RefSeq	ILMN_209814	ILMN_209814	ELK4	NM_007923.1	NM_007923.1		13714	6679632	NM_007923.1	Elk4	NP_031949.1	ILMN_1247510	001050068	S	1481	CCAGTTTCCCTCTGTACTCAACAGTCATGGGCCGCTCACTCTTTCAGGAC	1	+	133920133-133920182	1qE4	Mus musculus ELK4, member of ETS oncogene family (Elk4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	A130026I01Rik; 2310011G17Rik; Sap1; BB162516	A130026I01Rik; 2310011G17Rik; Sap1; BB162516
Mus musculus	RefSeq	ILMN_218318	ILMN_218318	USP49	NM_198421.1	NM_198421.1		224836	38259219	NM_198421.1	Usp49	NP_940813.1	ILMN_2803170	005080601	S	5104	CTCAATAGCAGAGTTTATTTTTGTTCACAGTGGCAAGGCCTCTCGAGTCC	17	+	47820539-47820588	17qC	Mus musculus ubiquitin specific peptidase 49 (Usp49), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Gm545; C330046L10Rik	Gm545; C330046L10Rik
Mus musculus	RefSeq	ILMN_218318	ILMN_218318	USP49	NM_198421.1	NM_198421.1		224836	38259219	NM_198421.1	Usp49	NP_940813.1	ILMN_2694302	006650280	S	3384	CCACCTCTGCTGCTTTGTCCGTGAGGAATAGAGCAAGACTCGTCTGTTAC	17	+	47818819-47818868	17qC	Mus musculus ubiquitin specific peptidase 49 (Usp49), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Gm545; C330046L10Rik	Gm545; C330046L10Rik
Mus musculus	MEEBO	ILMN_186103	ILMN_186103	A230057G18RIK	scl26213.1.3_304				51711414	XM_489103	A230057G18Rik		ILMN_1227587	007210270	S	4	GGGTCCAGCCACAATTACGGGCTCTTTTGGTTTTCATGCTTGTAGCTGCC										
Mus musculus	MEEBO	ILMN_186103	ILMN_186103	A230057G18RIK	scl26213.1.3_304				51711414	XM_489103	A230057G18Rik		ILMN_2715682	007400202	S	3704	CTAGTCAGGCTGACCCCCACTGGGACGTTGGAGGATGAGAAAGGTATGGC										
Mus musculus	RefSeq	ILMN_242424	ILMN_242424	DOS	NM_015761.1	NM_015761.1		216164	71895066	NM_015761.1	Dos	NP_056576.1	ILMN_2924041	004560497	S	1897	GGGGCACTGAGGATCAGAGAGGAGCTCGCCGCCCCATATTCTGAGTTGAT	10	-	79593573-79593622	10qC1	Mus musculus downstream of Stk11 (Dos), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			R29144/1; 9630008F14; MGC118572	R29144/1; 9630008F14; MGC118572
Mus musculus	RefSeq	ILMN_212812	ILMN_212812	NME7	NM_138314.2	NM_138314.2		171567	141803388	NM_138314.2	Nme7	NP_612187.1	ILMN_1256136	000940162	S	1492	GACACAAGATCAACAAGAGCACTGTACTCCTGGCAATTATTACATATGCT	1	+	166367282-166367331	1qH2.2	Mus musculus non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) (Nme7), transcript variant 1, mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	Nm23-M7; D530024H21Rik; Nm23-r7	Nm23-M7; D530024H21Rik; Nm23-r7
Mus musculus	RefSeq	ILMN_212812	ILMN_212812	NME7	NM_138314.2	NM_138314.2		171567	141803388	NM_138314.2	Nme7	NP_612187.1	ILMN_2630618	000770411	S	1302	TAAGGTTCAAAATGCTGTTCATTGCACGGATCTGCCGGAGGATGGGCTCC	1	+	166333154-166333203	1qH2.2	Mus musculus non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) (Nme7), transcript variant 1, mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	Nm23-M7; D530024H21Rik; Nm23-r7	Nm23-M7; D530024H21Rik; Nm23-r7
Mus musculus	RefSeq	ILMN_195142	ILMN_212812	NME7	NM_138314.2	NM_138314.2		171567	141803388	NM_138314.2	Nme7	NP_612187.1	ILMN_1214703	000130010	S	1551	TCCATGTTCTAGCATATGTAATAATTGCCAGGAGTACAGTGCTCTTGTTG	1	+	166367341-166367390	1qH2.2	Mus musculus non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) (Nme7), transcript variant 1, mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	Nm23-M7; D530024H21Rik; Nm23-r7	Nm23-M7; D530024H21Rik; Nm23-r7
Mus musculus	RefSeq	ILMN_212812	ILMN_212812	NME7	NM_138314.2	NM_138314.2		171567	141803388	NM_138314.2	Nme7	NP_612187.1	ILMN_1220095	000450719	S	1389	GCTCTCCAGAGTAAAGACGACACAGACTGAGACGCCCAGACAATCGAGTC	1	+	166367179-166367179:166367180-166367228	1qH2.2	Mus musculus non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) (Nme7), transcript variant 1, mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	Nm23-M7; D530024H21Rik; Nm23-r7	Nm23-M7; D530024H21Rik; Nm23-r7
Mus musculus	RefSeq	ILMN_189285	ILMN_212812	NME7	NM_138314.2	NM_138314.2		171567	141803388	NM_138314.2	Nme7	NP_612187.1	ILMN_1259075	004260609	S	1534	GTAATAATTGCCAGGAGTACAGTGCTCTTGTTGATCTTGTGTCAGTCAGG	1	+	166367324-166367373	1qH2.2	Mus musculus non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) (Nme7), transcript variant 1, mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	Nm23-M7; D530024H21Rik; Nm23-r7	Nm23-M7; D530024H21Rik; Nm23-r7
Mus musculus	RefSeq	ILMN_212812	ILMN_212812	NME7	NM_138314.2	NM_138314.2		171567	141803388	NM_138314.2	Nme7	NP_612187.1	ILMN_1246498	004780390	S	1485	CCTGACTGACACAAGATCAACAAGAGCACTGTACTCCTGGCAATTATTAC	1	+	166367275-166367324	1qH2.2	Mus musculus non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) (Nme7), transcript variant 1, mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	Nm23-M7; D530024H21Rik; Nm23-r7	Nm23-M7; D530024H21Rik; Nm23-r7
Mus musculus	RefSeq	ILMN_213243	ILMN_212812	NME7	NM_138314.2	NM_138314.2		171567	141803388	NM_138314.2	Nme7	NP_612187.1	ILMN_2635105	004490678	S	290	CAGAGTGGTATGATCCAAATGCTTCATTGCTCCGACGCTATGAGCTGCTG	1	+	166258452-166258501	1qH2.2	Mus musculus non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) (Nme7), transcript variant 1, mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	Nm23-M7; D530024H21Rik; Nm23-r7	Nm23-M7; D530024H21Rik; Nm23-r7
Mus musculus	RefSeq	ILMN_194902	ILMN_212812	NME7	NM_138314.2	NM_138314.2		171567	141803388	NM_138314.2	Nme7	NP_612187.1	ILMN_2510694	000130215	S	1520	GAGTACAGTGCTCTTGTTGATCTTGTGTCAGTCAGGTTAACACAACGGAC	1	+	166367310-166367359	1qH2.2	Mus musculus non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) (Nme7), transcript variant 1, mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	Nm23-M7; D530024H21Rik; Nm23-r7	Nm23-M7; D530024H21Rik; Nm23-r7
Mus musculus	RefSeq	ILMN_211603	ILMN_211603	FBXO34	NM_030236.1	NM_030236.1		78938	21624632	NM_030236.1	Fbxo34	NP_084512.1	ILMN_2747552	003120327	S	2617	TTACCCTAGGCCTGTATGCTCGTTCCCGTGAGAGTGGTGACTGCAGACCG	14	+	46453511-46453560	14qC1	Mus musculus F-box protein 34 (Fbxo34), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2900057B08Rik; 5830426G16Rik	2900057B08Rik; 5830426G16Rik
Mus musculus	RefSeq	ILMN_211603	ILMN_211603	FBXO34	NM_030236.1	NM_030236.1		78938	21624632	NM_030236.1	Fbxo34	NP_084512.1	ILMN_2876325	004040309	S	2476	CCTCCATCAAGGACATTCAGAGGTCACCAGGCAGTCTCCACAAGGGGATC	14	+	46453370-46453419	14qC1	Mus musculus F-box protein 34 (Fbxo34), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2900057B08Rik; 5830426G16Rik	2900057B08Rik; 5830426G16Rik
Mus musculus	RefSeq	ILMN_201354	ILMN_201354	LOC382514	XM_356544.1	XM_356544.1			38091611	XM_356544.1	LOC382514		ILMN_1224055	006510563	S	629	GGCCAGAATCTCCAAGGCAGGAAGATAATGCCTGGCGTCCATTGCTCACC										
Mus musculus	MEEBO	ILMN_194120	ILMN_194120	MTDNA_CYTB	mtDNA_CytB						mtDNA_CytB		ILMN_1239040	006960022	S	7	GACCCGATTCTTCGCTTTCCACTTCATCTTACCATTTATTATCGCGGCCC										
Mus musculus	Riken	ILMN_203052	ILMN_203052	SAG	ri|A930001K18|PX00065E03|AK044214|1349					AK044214	Sag		ILMN_1232031	003370131	S	1089	CTGTCTTCTCAGTGACTGGCAGGTGGATGGCAAAGTAAGCCCGAGGTACC							The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a phosphorylated protein [goid 51219] [evidence IDA]; Interacting selectively with an opsin, any of a group of hydrophobic, integral membrane glycoproteins located primarily in the disc membrane of rods or cones, involved in photoreception [goid 2046] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217260	ILMN_217260	RGS18	NM_022881.4	NM_022881.4		64214	146135013	NM_022881.4	Rgs18	NP_075019.1	ILMN_1221931	000460138	S	1338	GTTGTTGCATACTAATTCTGACTACAGATTATCTGTTTATCACTTCCACC				1qF	Mus musculus regulator of G-protein signaling 18 (Rgs18), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IPI]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IDA]; Inhibits signal transduction the GTPase activity of G-protein alpha subunits, thereby driving them into their inactive GDP-bound form [goid 16299] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC117531	MGC117531
Mus musculus	RefSeq	ILMN_208755	ILMN_208755	PABPC4	NM_148917.2	NM_148917.2		230721	118130218	NM_148917.2	Pabpc4	NP_683717.1	ILMN_3159730	004480674	A	1730	CAACTGGCGTCCCTACAGCCGTGCCAAACCTTGCACCTCGGGCCGCAGTT	4	+	122972511-122972516:122973173-122973216	4qD2.2	Mus musculus poly A binding protein, cytoplasmic 4 (Pabpc4), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence ISO]; Interacting selectively with a sequence of cytosine residues in an RNA molecule [goid 17130] [evidence ISO]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [evidence ISO]	MGC6685; MGC11665	MGC6685; MGC11665
Mus musculus	MEEBO	ILMN_215086	ILMN_215086	SIAT7F	scl050935.8_5	NM_016973.1			8394268	NM_016973.1	Siat7f		ILMN_2655373	003190500	S	1003	TCCAGAACGAGCACAGCCGTAAGGGCAATCACCACCGCTTCATCACCGAG										
Mus musculus	Riken	ILMN_205966	ILMN_205966	C230081G24RIK	ri|C230081G24|PX00176N17|AK048916|1990					AK048916	C230081G24Rik		ILMN_1249463	006370193	S	1872	CCAGTGAGTACTGGAGGGCATGGAAATCCACCCCTGTGCTGTGCTCTGTG										
Mus musculus	RefSeq	ILMN_203844	ILMN_188833	MTUS1	NM_001005863.2	NM_001005863.2		102103	111074533	NM_001005863.2	Mtus1	NP_001005863.1	ILMN_2560386	000830037	S	941	GAACAGGGTCAGCCTTTGCATGCTCCTGGAGGTTTGCAGACAACAGTGAG	8	-	42169450-42169499	8qA4	Mus musculus mitochondrial tumor suppressor 1 (Mtus1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		MGC115798; B430305I03Rik; C85752; ATBP135; MTSG1; AI481402; B430010I23Rik; mKIAA1288; Cctsg1-440; MD44; Atip1	MGC115798; B430305I03Rik; C85752; ATBP135; MTSG1; AI481402; B430010I23Rik; mKIAA1288; Cctsg1-440; MD44; Atip1
Mus musculus	MEEBO	ILMN_189892	ILMN_189892	PIGT	scl19937.12_3				19527005	NM_133779	Pigt		ILMN_2743377	002260348	S	2067	TCCTGTGAGCTCGTGCCGAATTCGGCACGAGGGGGAATCAGGGTTCGATT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor [goid 42765] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain [goid 16255] [evidence TAS]	Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor [goid 3923] [evidence IMP]		
Mus musculus	RefSeq	ILMN_222646	ILMN_222646	AKR1D1	NM_145364.1	NM_145364.1		208665	21703733	NM_145364.1	Akr1d1	NP_663339.1	ILMN_2752782	004760086	S	1962	GCCTGCACTCATCAAGAAAACCACCATGTAAAGTGGCAAGAAACAAGATA	6	+	37518078-37518127	6qB1	Mus musculus aldo-keto reductase family 1, member D1 (Akr1d1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of bile acids, any of a group of steroid carboxylic acids occurring in bile [goid 30573] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the formation of bile acids, any of a group of steroid carboxylic acids occurring in bile [goid 6699] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: a 3-oxo-5-beta-steroid + acceptor = a 3-oxo-D4-steroid + reduced acceptor [goid 47568] [evidence ISO]; Catalysis of the reactions: (1) 5beta-cholestan-3-one + NADP+ = cholest-4-en-3-one + NADPH + H+ and (2) 17,21-dihydroxy-5beta-pregnane-3,11,20-trione + NADP+ = cortisone + NADPH + H+ [goid 47787] [evidence IEA]	MGC25814	MGC25814
Mus musculus	RefSeq	ILMN_218693	ILMN_218693	CRYBG3	NM_174848.2	NM_174848.2		224273	31341295	NM_174848.2	Crybg3	NP_777273.1	ILMN_2699028	005670040	S	5167	GTGTACTGCAGTTGTGCCTTTTCTACAACACTGCATTGAATAAACTTGTC	16	-	59491928-59491977	16qC1.3	Mus musculus beta-gamma crystallin domain containing 3 (Crybg3), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	5031404N19; MGC58045; AU022790	5031404N19; MGC58045; AU022790
Mus musculus	RefSeq	ILMN_195971	ILMN_234110	ETAA1	NM_026576.2	NM_026576.2		68145	142384332	NM_026576.2	Etaa1	NP_080852.1	ILMN_1240716	004560768	S	2649	GCATACTGTGCAGTCAGCTCCCATTTCACTGCCTTGATGAAAGTCGAGTT	11	-	17840215-17840228:17840229-17840264	11qA3.1	Mus musculus Ewing's tumor-associated antigen 1 (Etaa1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			5730466H23Rik; AA672646; RP23-353E13.3	5730466H23Rik; AA672646; RP23-353E13.3
Mus musculus	MEEBO	ILMN_192964	ILMN_192964	4933402J24RIK	scl2539.2.1_90				51709045	XM_131279	4933402J24Rik		ILMN_1251406	001260215	S	8	CCACCTCTGATCTACTTCCTGTACTGGAGTAGTTCCTGTCTTCATTCATG										
Mus musculus	MEEBO	ILMN_192964	ILMN_192964	4933402J24RIK	scl2539.2.1_90				51709045	XM_131279	4933402J24Rik		ILMN_1260528	000430398	I	1157	CATTCCACATGCCCTCAAGGAGGTTTTAGGACCTTGATGTAATGTCACCC										
Mus musculus	RefSeq	ILMN_201386	ILMN_201386	LOC385076	XM_358036.1	XM_358036.1			38093441	XM_358036.1	LOC385076		ILMN_2542116	006220017	S	320	ACTGCGGAGGTGATTCCAGCCTTCAGCACAAATGCACACAAACCTTAGAC										
Mus musculus	RefSeq	ILMN_188438	ILMN_248056	CHMP1B	NM_024190.1	NM_024190.1		67064	13195617	NM_024190.1	Chmp1b	NP_077152.1	ILMN_1222607	002900594	S	1462	GCCAAACATTGCCAAAGAACTGCTGATTTGGTCCGGCCAAGCCCTAGGAC	18	+	67366538-67366587	18qE1	Mus musculus chromatin modifying protein 1B (Chmp1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		2810405I11Rik	2810405I11Rik
Mus musculus	RefSeq	ILMN_220659	ILMN_220659	PECI	NM_011868.1	NM_011868.1		23986	6755025	NM_011868.1	Peci	NP_035998.1	ILMN_2985282	002690717	S	1222	GTCTGGACCAGGCTGAAAACATATGCGAACGTCCCGCCAAACGCCATGAG	13	-	35069927-35069935:35070519-35070559	13qA3.3	Mus musculus peroxisomal delta3, delta2-enoyl-Coenzyme A isomerase (Peci), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: 3-cis-dodecenoyl-CoA = 2-trans-dodecenoyl-CoA [goid 4165] [evidence IEA]	DRS1; HCA88; ACBD2	DRS1; HCA88; ACBD2
Mus musculus	RefSeq	ILMN_185329	ILMN_185329	ZDHHC6	NM_025883.3	NM_025883.3		66980	75992949	NM_025883.3	Zdhhc6	NP_080159.3	ILMN_3095059	005570088	A	1894	CTGAAGCAAGGCCGTTCCAGCCCAGTGAGCAACTTGCCCTTTCTGTGTGC	19	-	55373015-55373064	19qD2	Mus musculus zinc finger, DHHC domain containing 6 (Zdhhc6), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C77369; 2400007G07Rik; AI462345; 5930409M18Rik	C77369; 2400007G07Rik; AI462345; 5930409M18Rik
Mus musculus	RefSeq	ILMN_201995	ILMN_185329	ZDHHC6	NM_025883.3	NM_025883.3		66980	75992949	NM_025883.3	Zdhhc6	NP_080159.3	ILMN_1225042	002490056	S	1961	CTGCAGGTCTAATTCCCCACTGGACAGGAGCATCTTGCATGTGGTTACTC	19	-	55372948-55372997	19qD2	Mus musculus zinc finger, DHHC domain containing 6 (Zdhhc6), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C77369; 2400007G07Rik; AI462345; 5930409M18Rik	C77369; 2400007G07Rik; AI462345; 5930409M18Rik
Mus musculus	RefSeq	ILMN_219146	ILMN_219146	INHBE	NM_008382.1	NM_008382.1		16326	6680452	NM_008382.1	Inhbe	NP_032408.1	ILMN_1229605	006770703	S	1770	TCAGTAAAAAGGGGTGCTGAACTCGTAAGTTCTTAGGCTTCCCCCTCGAG	10	-	126786773-126786822	10qD3	Mus musculus inhibin beta E (Inhbe), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193195	ILMN_193195	1110001P04RIK	scl076296.1_2						1110001P04Rik		ILMN_1248658	007000301	S	9	ACCAGTGGTTCTTGGGGAGGGGTGCTGGAGAATACAAAGTCACTTCCCTT										
Mus musculus	RefSeq	ILMN_211706	ILMN_211706	CSRP1	NM_007791.4	NM_007791.4		13007	145966730	NM_007791.4	Csrp1	NP_031817.1	ILMN_1260378	004780066	S	1524	CCTCCAACCCAGACTCAGACCCTTCTTTCTTCACCCTACCTTTCTCTAGT				1qE4	Mus musculus cysteine and glycine-rich protein 1 (Csrp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AA959891; CRP1; Csrp; AA408841; AW545626	AA959891; CRP1; Csrp; AA408841; AW545626
Mus musculus	RefSeq	ILMN_217760	ILMN_217760	SLC15A4	NM_133895.1	NM_133895.1		100561	19527111	NM_133895.1	Slc15a4	NP_598656.1	ILMN_2790312	003780167	S	2332	GGGGCTGCCTCATGTCTGCTTCTCAAGTGCTGAGATCTCAGATGTCTGTC	5	-	128076360-128076409	5qG1.2	Mus musculus solute carrier family 15, member 4 (Slc15a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]	PHT1; C130069N12Rik; AW742963; PTR4; AA987064	PHT1; C130069N12Rik; AW742963; PTR4; AA987064
Mus musculus	RefSeq	ILMN_217760	ILMN_217760	SLC15A4	NM_133895.1	NM_133895.1		100561	19527111	NM_133895.1	Slc15a4	NP_598656.1	ILMN_2687204	006020368	S	2133	GGATTCTCTTTAGAGGTGAAAGTGTGGTTGATGTCAAGAGAGCCCTAGGA	5	-	128076559-128076608	5qG1.2	Mus musculus solute carrier family 15, member 4 (Slc15a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]	PHT1; C130069N12Rik; AW742963; PTR4; AA987064	PHT1; C130069N12Rik; AW742963; PTR4; AA987064
Mus musculus	RefSeq	ILMN_211491	ILMN_211491	GPHA2	NM_130453.2	NM_130453.2		170458	24475777	NM_130453.2	Gpha2	NP_569720.1	ILMN_1245571	005270468	S	377	TGCAAGGGCCTGCCAGTGTGATATGTGCCGTTTCTCCCGCTACTAGTCCC	19	+	6227557-6227602:6227603-6227606	19qA	Mus musculus glycoprotein hormone alpha 2 (Gpha2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	GPA2; zsig51	GPA2; zsig51
Mus musculus	Riken	ILMN_201937	ILMN_201937	CKMT1	ri|9030406C11|PX00025C17|AK018487|961					AK018487	Ckmt1		ILMN_1217054	002260201	S	884	TGTCCTGGCTGGGTGTGGTGGCTCAACACCTGTAATCTCAGCTCTCAGAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + creatine = ADP + phosphocreatine [goid 4111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223732	ILMN_254294	5031408O05RIK	NM_001033424.2	NM_001033424.2		331491	142376404	NM_001033424.2	5031408O05Rik	NP_001028596.1	ILMN_2768318	006370504	S	3535	TTAGGACTATGAAATAACAACAGTATTTTGGATTTTATTTTAGAACAATG	X	-	103430658-103430707	XqD	Mus musculus RIKEN cDNA 5031408O05 gene (5031408O05Rik), mRNA.				Gm775	Gm775
Mus musculus	MEEBO	ILMN_211775	ILMN_211775	IGH-V11	scl016051.1_210	XM_354718.1			38073852	XM_354718.1	Igh-V11		ILMN_2619428	003800246	S	316	ACAATGACAAGAGCACCCTGTACCTGCAGATGAGCAATGTGCGATCGGAG										
Mus musculus	Riken	ILMN_204195	ILMN_204195	NNT	ri|C820002H02|PX00087J04|AK050478|3870					AK050478	Nnt		ILMN_1214693	002510465	S	3608	AAGGAGGCATAGGTGATGAGGTCAGAGGTCACTTACCCGGTCTTGGTGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+ [goid 8746] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD+ and B-specific (i.e. the pro-S hydrogen is transferred) with respect to NADP+ [goid 8750] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198080	ILMN_310305	TTLL2	NM_001098267.1	NM_001098267.1		625850	148298662	NM_001098267.1	Ttll2	NP_001091737.1	ILMN_1236799	000430711	S	1419	GGTCTTCCCGTATGCGTCTCAGTCACAGCCTCACAAGATGAAGGGGCCTG				17qA1	Mus musculus tubulin tyrosine ligase-like family, member 2 (Ttll2), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	EG625850	EG625850
Mus musculus	MEEBO	ILMN_185832	ILMN_185832	TOB2	scl0057259.2_60	NM_020507.2			31543883	NM_020507.2	Tob2		ILMN_2461287	001340132	S	20	CTCAGACTGCTTTGGAGTCTTAAGAGAAGAAATCCGGCGCTAAGGCGCTC							Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IMP]	Interacting selectively with the vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes [goid 42809] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216393	ILMN_216393	REEP2	NM_144865.1	NM_144865.1		225362	21450088	NM_144865.1	Reep2	NP_659114.2	ILMN_2676136	005960022	S	430	AGACAAGAGCTATGAGACGATGATGAGGGTGGGCAAGAGGGGCCTGAACC	18	+	35005257-35005306	18qB1	Mus musculus receptor accessory protein 2 (Reep2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C85440; MGC28827; BC020184	C85440; MGC28827; BC020184
Mus musculus	RefSeq	ILMN_216393	ILMN_216393	REEP2	NM_144865.1	NM_144865.1		225362	21450088	NM_144865.1	Reep2	NP_659114.2	ILMN_1231853	006020035	S	433	CAAGAGCTATGAGACGATGATGAGGGTGGGCAAGAGGGGCCTGAACCTGG	18	+	35005260-35005309	18qB1	Mus musculus receptor accessory protein 2 (Reep2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C85440; MGC28827; BC020184	C85440; MGC28827; BC020184
Mus musculus	RefSeq	ILMN_190210	ILMN_244722	MSN	NM_010833.2	NM_010833.2		17698	70778914	NM_010833.2	Msn	NP_034963.2	ILMN_2694960	002850133	S	2279	GTAGGTTAACAGCTAGCTCCCATCCCTTGCCAGTCCTGTGATTTGCAAAG	X	+	93362331-93362380	XqC3	Mus musculus moesin (Msn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C78546	C78546
Mus musculus	RefSeq	ILMN_212022	ILMN_212022	CIB1	NM_011870.2	NM_011870.2		23991	31981361	NM_011870.2	Cib1	NP_036000.1	ILMN_2621847	001430280	S	673	TGCTGAGATGTGGCCAAGGTTATGCCTGCGGTGTCAGGGCCAGTGCCGGC	7	-	80100787-80100836	7qD3	Mus musculus calcium and integrin binding 1 (calmyrin) (Cib1), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IMP]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence ISS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Cibkip; Kip; Prkdcip	Cibkip; Kip; Prkdcip
Mus musculus	RefSeq	ILMN_201992	ILMN_216166	BXDC2	NM_026396.3	NM_026396.3		67832	141802629	NM_026396.3	Bxdc2	NP_080672.3	ILMN_1232969	006250593	S	2275	CAGCAACCTGAGCCACCAGTGATGATGGGGATAGCTGACTAGGGAGATGC	15	-	10404863-10404912	15qA1	Mus musculus brix domain containing 2 (Bxdc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		C76935; 1110064N10Rik	C76935; 1110064N10Rik
Mus musculus	Riken	ILMN_207081	ILMN_207081	B930080B11RIK	ri|B930080B11|PX00665M24|AK081069|2107					AK081069	B930080B11Rik		ILMN_1248191	002370202	S	1922	GAAAAAGCAAGAACACTCCCAAGAGTAGGAGAGGCTAGAAGGGAGGACAG										
Mus musculus	RefSeq	ILMN_217565	ILMN_217565	D14ERTD668E	NM_199015.2	NM_199015.2		219132	142362087	NM_199015.2	D14Ertd668e	NP_950180.1	ILMN_2684848	000520053	S	334	CGCCACCGTGGGGTGTGATTTATGGTTCTGTAAGAAGAGTTACCACTATG	14	-	59975211-59975260	14qC3	Mus musculus DNA segment, Chr 14, ERATO Doi 668, expressed (D14Ertd668e), mRNA.				MGC29273	MGC29273
Mus musculus	RefSeq	ILMN_193129	ILMN_244180	BCL2L14	NM_025778.3	NM_025778.3		66813	146134973	NM_025778.3	Bcl2l14	NP_080054.1	ILMN_2677422	003310471	S	1490	GATTGTTTTACCTCTAAATGTTGAGAACGGAAACCATCCTGTTGCTACAC				6qG1	Mus musculus BCL2-like 14 (apoptosis facilitator) (Bcl2l14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		Bclg; 4933405K19Rik; AI429211; 9030625M01Rik; 4930452K23Rik	Bclg; 4933405K19Rik; AI429211; 9030625M01Rik; 4930452K23Rik
Mus musculus	RefSeq	ILMN_195748	ILMN_241818	TPM1	NM_024427.4	NM_024427.4		22003	146149131	NM_024427.4	Tpm1	NP_077745.2	ILMN_2518346	004220056	S	1504	ACATGCCCGTAGCCCCTTCCGACTCAGTGGGGCGAGCGCTCAACACGGAT				9qC	Mus musculus tropomyosin 1, alpha (Tpm1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; A form of the tropomyosin dimer found associated with actin and the troponin complex in muscle thin filaments [goid 5862] [evidence TAS]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]	AA986836; TM2; alpha-TM; Tmpa; Tpm-1	AA986836; TM2; alpha-TM; Tmpa; Tpm-1
Mus musculus	RefSeq	ILMN_213343	ILMN_213343	IFNK	NM_199157.2	NM_199157.2		387510	71534273	NM_199157.2	Ifnk	NP_954608.1	ILMN_2636143	005340646	S	337	ATCGGGACTTTTCAAACAAGTGCGGCAAGCTCAAGAGTGCTTCATGGACG	4	+	35099640-35099689	4qA5	Mus musculus interferon kappa (Ifnk), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213173	ILMN_213173	9330178D15	scl22433.5.1_309				51708508	XM_489032	9330178D15		ILMN_2634421	001400475	S	3371	ATTATGTAATCATAATATGAAGACTTATATCACAGGCATGTGTATGAATT										
Mus musculus	RefSeq	ILMN_213826	ILMN_312179	4933404G15RIK	XR_035436.1	XR_035436.1		74066	149267405	XR_035436.1	4933404G15Rik		ILMN_2641187	000620139	S	1311	CATTGGCTGAAATCTATGAAGAACAGCAGATTAAACCCTTTCCAGTTGCC	16	-	16707977-16708026	16qA3	PREDICTED: Mus musculus RIKEN cDNA 4933404G15 gene (4933404G15Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_215572	ILMN_215572	MOBKL2C	NM_175308.2	NM_175308.2		100465	31341565	NM_175308.2	Mobkl2c	NP_780517.1	ILMN_2825391	000010682	S	2540	CTGGCTAGAGATGGCTGCTGAGGCAAACCTCCAAAACCAGGCCCCTTCTT	4	+	115333773-115333822	4qD1	Mus musculus MOB1, Mps One Binder kinase activator-like 2C (yeast) (Mobkl2c), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW822253; MOB3C; D130076I06Rik	AW822253; MOB3C; D130076I06Rik
Mus musculus	RefSeq	ILMN_215572	ILMN_215572	MOBKL2C	NM_175308.2	NM_175308.2		100465	31341565	NM_175308.2	Mobkl2c	NP_780517.1	ILMN_1257133	006590039	S	2791	GGACCACAGGGGAGGGGGGAGGAGGGAAATCTATTTTTGTGAAAAGAAAG	4	+	115334024-115334073	4qD1	Mus musculus MOB1, Mps One Binder kinase activator-like 2C (yeast) (Mobkl2c), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW822253; MOB3C; D130076I06Rik	AW822253; MOB3C; D130076I06Rik
Mus musculus	RefSeq	ILMN_189038	ILMN_189038	TM9SF2	NM_080556.2	NM_080556.2		68059	31981521	NM_080556.2	Tm9sf2	NP_542123.2	ILMN_2509037	001580343	S	441	GTCAGAAGGAAAACGCCCATCTGAAAATCTTGGTCAGGTATTATTCGGGG	14	+	122525346-122525395	14qE5	Mus musculus transmembrane 9 superfamily member 2 (Tm9sf2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			P76; AA536814; 1500001N15Rik; D14Ertd64e	P76; AA536814; 1500001N15Rik; D14Ertd64e
Mus musculus	RefSeq	ILMN_189038	ILMN_189038	TM9SF2	NM_080556.2	NM_080556.2		68059	31981521	NM_080556.2	Tm9sf2	NP_542123.2	ILMN_1257503	004250167	S	2805	CACTCCCTGCATATTGAAGAAAACTCTGTGAATACAAATGTGTTGGCCAC	14	+	122558568-122558617	14qE5	Mus musculus transmembrane 9 superfamily member 2 (Tm9sf2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			P76; AA536814; 1500001N15Rik; D14Ertd64e	P76; AA536814; 1500001N15Rik; D14Ertd64e
Mus musculus	RefSeq	ILMN_189038	ILMN_189038	TM9SF2	NM_080556.2	NM_080556.2		68059	31981521	NM_080556.2	Tm9sf2	NP_542123.2	ILMN_2802611	000270594	S	2884	CTGTGGATACACACTTTCTGTTTCCACTTAAGTGAAACTGTCGGGCTTTG	14	+	122558647-122558696	14qE5	Mus musculus transmembrane 9 superfamily member 2 (Tm9sf2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			P76; AA536814; 1500001N15Rik; D14Ertd64e	P76; AA536814; 1500001N15Rik; D14Ertd64e
Mus musculus	Riken	ILMN_201623	ILMN_201623	2210012C09RIK	ri|1300004K21|R000011A17|AK004904|1796					AK004904	2210012C09Rik		ILMN_1228812	002100273	S	967	TTACCTCGTCTATCCTAAGTCTTCCCTTTGAGAGAGACCCGATGCAGGCC										
Mus musculus	RefSeq	ILMN_201109	ILMN_310244	LOC671641	XM_001479052.1	XM_001479052.1		671641	149258591	XM_001479052.1	LOC671641	XP_001479102.1	ILMN_1249136	004010241	S	253	TGAGCCCATGTATGCCAAGCTGGTGGAGCACCAAATCAACCTGATAAAGG	8	+	37088977-37089026	8qA4	PREDICTED: Mus musculus similar to ribosomal protein S12 (LOC671641), mRNA.					
Mus musculus	RefSeq	ILMN_195020	ILMN_310244	LOC671641	XM_001479052.1	XM_001479052.1		671641	149258591	XM_001479052.1	LOC671641	XP_001479102.1	ILMN_1251098	006350441	S	416	GAATCTCAGGCCAAGGATGTCATCGAGGAATACTTCAAGTGCAAGAAATA	8	+	37089140-37089189	8qA4	PREDICTED: Mus musculus similar to ribosomal protein S12 (LOC671641), mRNA.					
Mus musculus	RefSeq	ILMN_211439	ILMN_211439	TEX19.1	NM_028602.2	NM_028602.2		73679	28077022	NM_028602.2	Tex19.1	NP_082878.2	ILMN_2615917	007560189	S	1448	TCAGAGGGAAGTCTGGCATGTTCGTGTCAGTGTTCAGTGTTTGGTAGGTG	11	+	121009336-121009385	11qE2	Mus musculus testis expressed gene 19.1 (Tex19.1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410081M02Rik	2410081M02Rik
Mus musculus	RefSeq	ILMN_200096	ILMN_200096	LOC381660	XM_355626.1	XM_355626.1			38080342	XM_355626.1	LOC381660		ILMN_1256279	006370554	S	2932	CTAGCGCCATCTTGTCTTTTGGCTCTTGGCCTGTGTTCTTCAGGGAGTGG										
Mus musculus	RefSeq	ILMN_196793	ILMN_196793	LOC243537	XM_144896.1	XM_144896.1			20829421	XM_144896.1	LOC243537		ILMN_2525822	001190021	S	590	GCTTGGACCGCTGCATTGCAAGACTCAGGTACGGTTTGGCTGTATGGGAC										
Mus musculus	RefSeq	ILMN_220731	ILMN_237202	EXOC6B	XM_922979.2	XM_922979.2		75914	94377701	XM_922979.2	Exoc6b	XP_928072.1	ILMN_1229985	004250180	S	5388	CCCCTGTGCACCTTCCTCTTTTAACTGCTATTAAACGAGAGCCTACATAC				6qC3	PREDICTED: Mus musculus exocyst complex component 6B, transcript variant 17 (Exoc6b), mRNA.					
Mus musculus	RefSeq	ILMN_220731	ILMN_237202	EXOC6B	XM_922979.2	XM_922979.2		75914	94377701	XM_922979.2	Exoc6b	XP_928072.1	ILMN_2728950	002750730	S	1587	GCCAAAAGTTTACAACCAGATTAAAGAATTTATCTACGCCTGCCTGAAGT				6qC3	PREDICTED: Mus musculus exocyst complex component 6B, transcript variant 17 (Exoc6b), mRNA.					
Mus musculus	RefSeq	ILMN_192729	ILMN_239090	EXOC8	NM_198103.2	NM_198103.2		102058	111160870	NM_198103.2	Exoc8	NP_932771.1	ILMN_2689560	003940438	S	4519	ATAAACCGTGCATAAGGCCTCGAGGTGTAAGAAGGCTAACATGTTTCCCC	8	-	127417037-127417086	8qE2	Mus musculus exocyst complex component 8 (Exoc8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals [goid 145] [evidence ISO]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with Ral protein, any member of the Ral subfamily of the Ras superfamily of monomeric GTPases [goid 17160] [evidence ISO]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence ISO]	Exo84p; SEC84; R74783; EXO84; AI414418	Exo84p; SEC84; R74783; EXO84; AI414418
Mus musculus	RefSeq	ILMN_215814	ILMN_215814	GIP	NM_008119.2	NM_008119.2		14607	31982339	NM_008119.2	Gip	NP_032145.2	ILMN_2986549	006270445	S	320	GGGGGAAGAAGAGTGACTGGAAACACAACATCACCCAGAGAGAGGCCCGG	11	+	95888069-95888084:95890000-95890033	11qD	Mus musculus gastric inhibitory polypeptide (Gip), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC129269; MGC129268	MGC129269; MGC129268
Mus musculus	RefSeq	ILMN_219535	ILMN_219535	PPARGC1A	NM_008904.1	NM_008904.1		19017	6679432	NM_008904.1	Ppargc1a	NP_032930.1	ILMN_2710139	005550025	S	2527	CTCATGGGACAGCGTGTCCTTTCCCAAGACTCTTGCAAGTCATACTTAGG	5	-	51849315-51849364	5qC1	Mus musculus peroxisome proliferative activated receptor, gamma, coactivator 1 alpha (Ppargc1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IMP]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PGC-1; A830037N07Rik; Pgc1; Pgc-1alpha; Pgco1; Ppargc1; PGC-1v	PGC-1; A830037N07Rik; Pgc1; Pgc-1alpha; Pgco1; Ppargc1; PGC-1v
Mus musculus	MEEBO	ILMN_214669	ILMN_214669	2810401C16RIK	scl49376.15_6	NM_175178.2			31340891	NM_175178.2	2810401C16Rik		ILMN_2650586	006980086	S	3186	GGGTCCAGTAAGAACTAAGAATTGGCAAATAAGAACTGGGTTGGCTCAGG										
Mus musculus	RefSeq	ILMN_217826	ILMN_319719	CHD2	NM_001081345.1	NM_001081345.1		244059	145587083	NM_001081345.1	Chd2	NP_001074814.1	ILMN_1213322	007570228	S	4033	GGGGCGTGGAGGACGATTCTCGTCTGTTGCTTGGAATCTATGAACATGGC				7qD1	Mus musculus chromodomain helicase DNA binding protein 2 (Chd2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC029703; 2810013C04Rik; AI851092; 2810040A01Rik; 5630401D06Rik	BC029703; 2810013C04Rik; AI851092; 2810040A01Rik; 5630401D06Rik
Mus musculus	RefSeq	ILMN_201087	ILMN_319719	CHD2	NM_001081345.1	NM_001081345.1		244059	145587083	NM_001081345.1	Chd2	NP_001074814.1	ILMN_1227862	005260358	S	1872	CCCTTGTCCACCCTTACCTCATGGCAGAGAGAGTTTGAGATCTGGGCACC				7qD1	Mus musculus chromodomain helicase DNA binding protein 2 (Chd2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC029703; 2810013C04Rik; AI851092; 2810040A01Rik; 5630401D06Rik	BC029703; 2810013C04Rik; AI851092; 2810040A01Rik; 5630401D06Rik
Mus musculus	MEEBO	ILMN_188176	ILMN_188176	BC022765	scl40972.4_107				22122504	NM_146026	BC022765		ILMN_1215227	001570491	S	6	GCTCCCTGGTCTCTAAGCTTTTTACATGTACCACCACAGTCCCAGAAAGA										
Mus musculus	RefSeq	ILMN_219553	ILMN_219553	GRIN2D	NM_008172.2	NM_008172.2		14814	144922605	NM_008172.2	Grin2d	NP_032198.2	ILMN_2710382	000870242	S	3659	ATCTCAGCTGCTCGCACGACGGCCTAGACGGTGGCTGGTGGGCGCCTCCG	7	-	53088527-53088576	7qB4	Mus musculus glutamate receptor, ionotropic, NMDA2D (epsilon 4) (Grin2d), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 51930] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 4972] [evidence IDA];  [goid 4972] [evidence IMP]	NR2D; NMDAR2D	NR2D; NMDAR2D
Mus musculus	RefSeq	ILMN_210592	ILMN_210592	0910001A06RIK	NM_144846.2	NM_144846.2		223601	31541792	NM_144846.2	0910001A06Rik	NP_659095.1	ILMN_2865552	001260746	S	3437	GCATAGTACCTAAATATGGAGAGCTGCCAAGTGAGTAATTGAATGGAGTG	15	-	63759073-63759122	15qD1	Mus musculus RIKEN cDNA 0910001A06 gene (0910001A06Rik), mRNA.				AW122079	AW122079
Mus musculus	RefSeq	ILMN_212778	ILMN_212778	OLFR1208	NM_146778.1	NM_146778.1		258774	22129290	NM_146778.1	Olfr1208	NP_666989.1	ILMN_2630221	003610372	S	596	CCACAGGGGTGATGTCCATTCTGACCTTTGTTGCATTGGTCATTTCTTAC	2	-	88737107-88737156	2qE1	Mus musculus olfactory receptor 1208 (Olfr1208), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR225-4	MOR225-4
Mus musculus	MEEBO	ILMN_184871	ILMN_184871	AKT2	scl32891.21_547				27312021	NM_007434	Akt2		ILMN_1255147	005390497	S	14	CGCGTCCGCTGAAAGGAGACTGTAAAAAGTGGCTCTGGTGTGTGGAGCTG						A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197334	ILMN_197334	LOC381396	XM_358565.1	XM_358565.1			38075185	XM_358565.1	LOC381396		ILMN_1227005	006350129	S	529	GTGCGGTCTTCCTCGGGGCAAACAGACCTTCTGCTTCGGCTTCAGAAGAT										
Mus musculus	RefSeq	ILMN_199455	ILMN_199455	LOC383502	XM_357096.1	XM_357096.1			38049400	XM_357096.1	LOC383502		ILMN_1251014	004120048	S	564	GGTTATACGTCTTCTCTTGAGCATAACTGTGGCACTGAGGGAGCATGGGC										
Mus musculus	MEEBO	ILMN_185713	ILMN_185713	B930075F07	scl54719.1.3_182						B930075F07		ILMN_1247127	000580162	S	14	GTAGTGTTATGTAGCCTGTGGAATGAATTCCTCTTCCCCCTGGAGTCCAG										
Mus musculus	Riken	ILMN_205900	ILMN_205900	CACNA1H	ri|A830002A02|PX00153J03|AK043501|1666					AK043501	Cacna1h		ILMN_2576053	003800538	S	1320	TGGGGTGCAAAAGAGGCTTTTGGCCCCAGAACAGGTGGCCTTTTAGGGCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a low voltage-gated channel [goid 8332] [evidence ISS]		
Mus musculus	RefSeq	ILMN_195284	ILMN_195284	TTRAP	NM_019551.1	NM_019551.1		56196	9507212	NM_019551.1	Ttrap	NP_062424.1	ILMN_2514218	002480162	S	1834	GTTTTGTTACTGGTAAAATGGAAATACTTCACAGAGTGAATAAAGAATAC	13	+	24933905-24933954	13qA3.1	Mus musculus Traf and Tnf receptor associated protein (Ttrap), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence ISA]; Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group [goid 8081] [evidence ISA]	D13Ertd656e	D13Ertd656e
Mus musculus	MEEBO	ILMN_196113	ILMN_196113	TRGV4_AF037352_T_CELL_RECEPTOR_GAMMA_VARIABLE_4_99	TRGV4_AF037352_T_cell_receptor_gamma_variable_4_99						TRGV4_AF037352_T_cell_receptor_gamma_variable_4_99		ILMN_2521748	004830747	S	9	CACGTCACCTCTGGGGTCATATGTCATCAAGAGGAAAGGAAATACGGCTT										
Mus musculus	RefSeq	ILMN_215619	ILMN_215619	PRSS21	NM_020487.3	NM_020487.3		57256	142349958	NM_020487.3	Prss21	NP_065233.2	ILMN_2661685	007570195	S	999	GCCCACACGTGTACGTCACACCTGTGAGGTCAGGGTGTGTCTCTTTTGTA	17	+	24010002-24010051	17qA3.3	Mus musculus protease, serine, 21 (Prss21), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC151134; testisin; 1700023E12Rik; TESP5; MGC151132; mT4	MGC151134; testisin; 1700023E12Rik; TESP5; MGC151132; mT4
Mus musculus	RefSeq	ILMN_187239	ILMN_234238	TPK1	NM_013861.3	NM_013861.3		29807	146134412	NM_013861.3	Tpk1	NP_038889.1	ILMN_1235717	004610301	S	114	GCCTTGTGGTTCTTAATCAGCCTTTGGATGCACGATTTCGCCATCTTTGG				6qB2.1	Mus musculus thiamine pyrophosphokinase (Tpk1), mRNA.		The chemical reactions and pathways resulting in the formation of thiamin diphosphate, a derivative of thiamin (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle [goid 9229] [evidence IEA]; The chemical reactions and pathways involving thiamin (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 6772] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + thiamin = AMP + thiamin diphosphate [goid 4788] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187239	ILMN_234238	TPK1	NM_013861.3	NM_013861.3		29807	146134412	NM_013861.3	Tpk1	NP_038889.1	ILMN_2493332	003940176	S	506	GTGCCGATTATAATAATCCAAAAGGACTCTCTCATCTACCTCCTCCAACC				6qB2.1	Mus musculus thiamine pyrophosphokinase (Tpk1), mRNA.		The chemical reactions and pathways resulting in the formation of thiamin diphosphate, a derivative of thiamin (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle [goid 9229] [evidence IEA]; The chemical reactions and pathways involving thiamin (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 6772] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + thiamin = AMP + thiamin diphosphate [goid 4788] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187239	ILMN_234238	TPK1	NM_013861.3	NM_013861.3		29807	146134412	NM_013861.3	Tpk1	NP_038889.1	ILMN_2509644	001510300	S	2192	GTATCTTGCCAAACAAACCATGATTTAAGGCAACCTGCCTACCTTGTTGC				6qB2.1	Mus musculus thiamine pyrophosphokinase (Tpk1), mRNA.		The chemical reactions and pathways resulting in the formation of thiamin diphosphate, a derivative of thiamin (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle [goid 9229] [evidence IEA]; The chemical reactions and pathways involving thiamin (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 6772] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + thiamin = AMP + thiamin diphosphate [goid 4788] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192565	ILMN_192565	ASB15	scl30316.11_30				18252787	NM_080847	Asb15		ILMN_2686401	006900707	S	1824	CCGGCGGCGATGCGAAGATACTTATTATTTAAAGAGTTTGACCTCTACGG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]			
Mus musculus	MEEBO	ILMN_215010	ILMN_215010	D16ERTD642E	scl49073.14.1_30	XM_358841.1			38080814	XM_358841.1	D16Ertd642e		ILMN_2654501	004260079	S	2677	TTCCGTCATATCTCCACAACAGTGATTTCCAAAAACAGGAAAATGAACCA										
Mus musculus	RefSeq	ILMN_222997	ILMN_222997	H2AFZ	NM_016750.1	NM_016750.1		51788	7949044	NM_016750.1	H2afz	NP_058030.1	ILMN_3074985	003140500	I	109	AGGCTGGAAAGGACTCCGGAAAGGCCAAGACAAAGGCGGTTTCCCGCTCG	3	+	137802530-137802579	3qG3	Mus musculus H2A histone family, member Z (H2afz), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1740] [evidence ISA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2A.Z	H2A.Z
Mus musculus	RefSeq	ILMN_202353	ILMN_248937	LOC677118	XM_001004051.1	XM_001004051.1		677118	94406320	XM_001004051.1	LOC677118	XP_001004051.1	ILMN_1255433	000650767	S	794	GGCGAAGAGGCAGAGACTTTCAGGGTAATTATCTTGCTTGCTCCAAGGCA					PREDICTED: Mus musculus similar to DNA segment, Chr 19, ERATO Doi 652, expressed, transcript variant 2 (LOC677118), mRNA.					
Mus musculus	MEEBO	ILMN_195286	ILMN_195286	LUC7L2	scl30182.1.1_178				20373166	NM_138680	Luc7l2		ILMN_2514225	003800605	S	14	GGTGTGAGCTTGTGATAGTTTGGTTCTGATAAGAACTTGAGGCACTCACT								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_195286	ILMN_195286	LUC7L2	scl30182.1.1_178				20373166	NM_138680	Luc7l2		ILMN_1259283	000540017	S	20	AACTGAACTGTTAAATATGTAGTATATCTGTAAATTTCTCTTTGTAGTCC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210691	ILMN_210691	NOL1	NM_138747.1	NM_138747.1		110109	27819666	NM_138747.1	Nol1	NP_620086.1	ILMN_2608229	003830400	S	1037	CTGGGGAAGTGGTCAAAGTCTGGACTTGTGGTATATGATTCTTCAGTGCC	6	+	125089691-125089740	6qF2-qF3	Mus musculus nucleolar protein 1 (Nol1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A530002O17; 120kDa	A530002O17; 120kDa
Mus musculus	RefSeq	ILMN_210691	ILMN_210691	NOL1	NM_138747.1	NM_138747.1		110109	27819666	NM_138747.1	Nol1	NP_620086.1	ILMN_2688383	002190390	S	2300	CAGCCTGCTAATGGAGCTGCTCCCCTGAAAGAAGATGCTGTTTCCAAGGG	6	+	125094504-125094553	6qF2-qF3	Mus musculus nucleolar protein 1 (Nol1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A530002O17; 120kDa	A530002O17; 120kDa
Mus musculus	RefSeq	ILMN_210691	ILMN_210691	NOL1	NM_138747.1	NM_138747.1		110109	27819666	NM_138747.1	Nol1	NP_620086.1	ILMN_2688378	006330167	S	2287	CAGTTAGCACAGCAGCCTGCTAATGGAGCTGCTCCCCTGAAAGAAGATGC	6	+	125094491-125094540	6qF2-qF3	Mus musculus nucleolar protein 1 (Nol1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A530002O17; 120kDa	A530002O17; 120kDa
Mus musculus	RefSeq	ILMN_250954	ILMN_250954	SAMD3	NM_001013766.1	NM_001013766.1		268288	85701461	NM_001013766.1	Samd3	NP_001013788.1	ILMN_2854263	001110458	S	656	GGCAGATATGACTAAGTACCTGGAAGGCTCGCTGTACCCCACCACCCAGC	10	+	25934051-25934082:25934960-25934977	10qA4	Mus musculus sterile alpha motif domain containing 3 (Samd3), mRNA. XM_919386				Gm623	Gm623
Mus musculus	RefSeq	ILMN_200611	ILMN_200611	LOC384394	XM_357619.1	XM_357619.1			38084276	XM_357619.1	LOC384394		ILMN_1225960	001110348	S	163	GCTCCTCCATTTGTGGCCTCTGAGTTGCTGGGGAAGAAAGGTCTACAGAG										
Mus musculus	RefSeq	ILMN_187927	ILMN_187927	USP2	NM_198091.2	NM_198091.2		53376	114052525	NM_198091.2	Usp2	NP_932759.1	ILMN_2466316	002370646	S	1704	ACGCACGGCCTGGCAGGAAGACGGACTGATGCGGAGACAGTCAGCAGCAT	9	+	43902188-43902237	9qA5.1	Mus musculus ubiquitin specific peptidase 2 (Usp2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	B930035K21Rik; Ubp41	B930035K21Rik; Ubp41
Mus musculus	RefSeq	ILMN_187927	ILMN_187927	USP2	NM_198091.2	NM_198091.2		53376	114052525	NM_198091.2	Usp2	NP_932759.1	ILMN_2482390	002370142	S	205	ACTCCCGGTAACCCCTTGGTCAGCCGCGTTGGGTTTGGGGCATAGCCCAC	9	+	43893207-43893256	9qA5.1	Mus musculus ubiquitin specific peptidase 2 (Usp2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	B930035K21Rik; Ubp41	B930035K21Rik; Ubp41
Mus musculus	RefSeq	ILMN_187927	ILMN_187927	USP2	NM_198091.2	NM_198091.2		53376	114052525	NM_198091.2	Usp2	NP_932759.1	ILMN_1240264	006560328	S	1310	CCACTATACAGCCTACTGCCGAAGTCCGGTTACAGGCGAATGGCACACTT	9	+	43901268-43901317	9qA5.1	Mus musculus ubiquitin specific peptidase 2 (Usp2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	B930035K21Rik; Ubp41	B930035K21Rik; Ubp41
Mus musculus	Riken	ILMN_207208	ILMN_207208	C130021O09RIK	ri|C130021O09|PX00666K13|AK081501|3004					AK081501	C130021O09Rik		ILMN_2585858	002510326	S	2643	GCATCGCGTTTGTACACATATTCATGCCTTTATGTGCATGTGGCGGTCAG										
Mus musculus	MEEBO	ILMN_218630	ILMN_218630	FUSIP1	scl24830.8_31	NM_010178.1			6753819	NM_010178.1	Fusip1		ILMN_2698282	001440678	S	2586	GGCCCCTGTGGTTTGGGGTAGCTTGTTTTTAGTCTTGTCTATTGTGGTTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence NAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism [goid 48025] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, or within the cytoplasm of a cell [goid 16482] [evidence IDA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IC ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence NAS]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence NAS]		
Mus musculus	RefSeq	ILMN_194822	ILMN_194822	UNK	NM_172569.3	NM_172569.3		217331	146149136	NM_172569.3	Unk	NP_766157.1	ILMN_2509928	003190609	S	3513	AGATGCAGTGAATCGGGAAAGCAGAGTGGGCAGAGGGAGGCAGCCCTGTT				11qE2	Mus musculus unkempt homolog (Drosophila) (Unk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Zc3h5; B230379M23Rik; mKIAA1753; Zc3hdc5	Zc3h5; B230379M23Rik; mKIAA1753; Zc3hdc5
Mus musculus	Riken	ILMN_206306	ILMN_206306	D030059B04RIK	ri|D030059B04|PX00181I16|AK083645|2562					AK083645	D030059B04Rik		ILMN_1255686	005290390	S	2280	ACTGGACCTGTTGACCTATGGGCTCTTTGGAAGTGGAAGACCATCTGCCC										
Mus musculus	RefSeq	ILMN_217900	ILMN_217900	MAPK7	NM_011841.1	NM_011841.1		23939	6754633	NM_011841.1	Mapk7	NP_035971.1	ILMN_1232294	007560243	S	49	GAGCCCGGGGGAACACTCATCACTGGGTTGGCAAGACTCAGGAATCCCAA	11	-	61307619-61307668	11qB2	Mus musculus mitogen-activated protein kinase 7 (Mapk7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	ERK5; PRKM7; BMK1; Erk5-T	ERK5; PRKM7; BMK1; Erk5-T
Mus musculus	RefSeq	ILMN_217900	ILMN_217900	MAPK7	NM_011841.1	NM_011841.1		23939	6754633	NM_011841.1	Mapk7	NP_035971.1	ILMN_1240175	002260100	S	2889	GTTTTGCCATCAAAATGAGGCCTGTGAAATACAAGGTTTTCTTTAACCTG				11qB2	Mus musculus mitogen-activated protein kinase 7 (Mapk7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	ERK5; PRKM7; BMK1; Erk5-T	ERK5; PRKM7; BMK1; Erk5-T
Mus musculus	RefSeq	ILMN_194303	ILMN_243082	PNPLA8	NM_026164.2	NM_026164.2		67452	118130806	NM_026164.2	Pnpla8	NP_080440.2	ILMN_1251273	001660156	S	2858	GGGGGATGTTACACTTCAGCCTTTGCTTTTACTCGTTTCAATCATGTGGA	12	+	45412876-45412925	12qB3	Mus musculus patatin-like phospholipase domain containing 8 (Pnpla8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]	MGC150064; AI467579; Ipla2(gamma); 1200006O19Rik	MGC150064; AI467579; Ipla2(gamma); 1200006O19Rik
Mus musculus	RefSeq	ILMN_194303	ILMN_243082	PNPLA8	NM_026164.2	NM_026164.2		67452	118130806	NM_026164.2	Pnpla8	NP_080440.2	ILMN_2751653	005490753	S	1304	GAACTCGAGCCTTAGTTCAGGCCTTAAGAAGAACAGCCGACCCAAAGCTC	12	+	45384808-45384857	12qB3	Mus musculus patatin-like phospholipase domain containing 8 (Pnpla8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]	MGC150064; AI467579; Ipla2(gamma); 1200006O19Rik	MGC150064; AI467579; Ipla2(gamma); 1200006O19Rik
Mus musculus	MEEBO	ILMN_188351	ILMN_188351	4933407I08RIK	scl52019.2.1_6						4933407I08Rik		ILMN_2451951	002370746	S	13	GGCCTAATTGCCACTGACTTCATAATAGTCAATGTTTCCTGTTGATGGGG										
Mus musculus	RefSeq	ILMN_199592	ILMN_186131	UBE2V2	NM_023585.3	NM_023585.3		70620	141802283	NM_023585.3	Ube2v2	NP_076074.2	ILMN_2535778	000730392	S	267	AGATTTGTAACAAAAATTAATATGAATGGGATCAATAATTCCAGTGGAAT	16	-	15577108-15577157	16qA2	Mus musculus ubiquitin-conjugating enzyme E2 variant 2 (Ube2v2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	MGC102399; 1110021H13Rik; AI848315; 6820402M05; 4632410D19Rik; C81524; 5730524P06Rik; MMS2	MGC102399; 1110021H13Rik; AI848315; 6820402M05; 4632410D19Rik; C81524; 5730524P06Rik; MMS2
Mus musculus	RefSeq	ILMN_186131	ILMN_186131	UBE2V2	NM_023585.3	NM_023585.3		70620	141802283	NM_023585.3	Ube2v2	NP_076074.2	ILMN_2432873	001500113	S	3305	CCAGTAGGTCCCTGTTATACTTTAATGGCTTTAACTATTTGTTATTTTCA	16	-	15553599-15553648	16qA2	Mus musculus ubiquitin-conjugating enzyme E2 variant 2 (Ube2v2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	MGC102399; 1110021H13Rik; AI848315; 6820402M05; 4632410D19Rik; C81524; 5730524P06Rik; MMS2	MGC102399; 1110021H13Rik; AI848315; 6820402M05; 4632410D19Rik; C81524; 5730524P06Rik; MMS2
Mus musculus	RefSeq	ILMN_210387	ILMN_210387	OLFR1212	NM_207140.1	NM_207140.1		258241	46369488	NM_207140.1	Olfr1212	NP_997023.1	ILMN_2605109	000240139	S	776	GATCTACATCTGCATCATCTTTTGAGAAAAAGGTGGCTGTGTTCGATGGC	2	+	88799400-88799449	2qE1	Mus musculus olfactory receptor 1212 (Olfr1212), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR233-20; MOR233-17	MOR233-20; MOR233-17
Mus musculus	MEEBO	ILMN_187181	ILMN_187181	2900017F05RIK	scl53284.1.1_224						2900017F05Rik		ILMN_1243587	003840538	S	1	CACTTCCAGGTACCAAATCCATCAAGCTCTGTGTGAGGGGAATCACCTTG										
Mus musculus	RefSeq	ILMN_187926	ILMN_231292	1700092M07RIK	XM_920535.2	XM_920535.2		74307	94405791	XM_920535.2	1700092M07Rik	XP_925628.1	ILMN_2448322	007200059	S	129	GGCAACGAAGTGGACAACTCAGGCCGCCGTAAACAAAGATCTAACGAAAG				19qA	PREDICTED: Mus musculus RIKEN cDNA 1700092M07 gene (1700092M07Rik), mRNA.					
Mus musculus	Riken	ILMN_205715	ILMN_205715	C630024B01RIK	ri|C630024B01|PX00084K03|AK049953|2196					AK049953	C630024B01Rik		ILMN_1246664	002940047	S	2076	AAAGGCCCCTTGCACCAGCACAAGCACCTTATTCGCCCGCTGGGAACTGA										
Mus musculus	RefSeq	ILMN_218754	ILMN_218754	A930038C07RIK	NM_172399.2	NM_172399.2		68169	141802440	NM_172399.2	A930038C07Rik	NP_765987.1	ILMN_1251736	006650121	S	4277	GTGCTAAGATTTCAGGAGTATCCAGTGGACTAGGGACAAGGAAGGGACTC	6	+	65656517-65656566	6qC1	Mus musculus RIKEN cDNA A930038C07 gene (A930038C07Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_193359	ILMN_249962	TJP2	NM_011597.2	NM_011597.2		21873	142353787	NM_011597.2	Tjp2	NP_035727.1	ILMN_1256328	005360608	S	4171	GCTGGGGAGGCCAAGATTTTAGAGTGTTTGTCCGTTGTCTGGAACCACAT	19	-	24169241-24169290	19qB	Mus musculus tight junction protein 2 (Tjp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ZO-2	ZO-2
Mus musculus	RefSeq	ILMN_209823	ILMN_254486	5730455P16RIK	NM_027472.2	NM_027472.2		70591	141802550	NM_027472.2	5730455P16Rik	NP_081748.1	ILMN_2599544	004570040	S	172	GGGGATAGTGATGATGGACGTTCAGGTGGCATAAATGCAGAAACCCCCTC	11	-	80190319-80190368	11qB5	Mus musculus RIKEN cDNA 5730455P16 gene (5730455P16Rik), mRNA. XM_919691				RP23-252E4.2	RP23-252E4.2
Mus musculus	RefSeq	ILMN_209823	ILMN_254486	5730455P16RIK	NM_027472.2	NM_027472.2		70591	141802550	NM_027472.2	5730455P16Rik	NP_081748.1	ILMN_1226103	004890215	S	3185	GCAGCTCTGTGGTACTTTTCTTGAATCTTTTCCCAATGCACTTGGTGCCC	11	-	80175276-80175325	11qB5	Mus musculus RIKEN cDNA 5730455P16 gene (5730455P16Rik), mRNA. XM_919691				RP23-252E4.2	RP23-252E4.2
Mus musculus	Riken	ILMN_203810	ILMN_203810	A330046P14RIK	ri|A330046P14|PX00132C19|AK039468|3524					AK039468	A330046P14Rik		ILMN_2560153	005960619	S	3042	CAAGGCAGAGAGGAGAGAGAGGGAGATGTTAACTGGGAAGGGTGTAGGCT										
Mus musculus	RefSeq	ILMN_186795	ILMN_257036	0610011F06RIK	NM_026686.1	NM_026686.1		68347	58037114	NM_026686.1	0610011F06Rik	NP_080962.1	ILMN_2438555	002230674	S	239	TTGTCCAATGTGAAGGCTCCGCTGTACCTGGACGTGACCTGGGAGTGGGA	17	+	26012933-26012982	17qA3.3	Mus musculus RIKEN cDNA 0610011F06 gene (0610011F06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210813	ILMN_210813	ADAM6	NM_174885.3	NM_174885.3		238406	119709838	NM_174885.3	Adam6	NP_777479.2	ILMN_1238157	002030327	S	2341	GGCAAGAACAAGCAAAGGACAAGTAAAATGAGTTAGCCCCCTGTCTCCTC	12|NT_114985.2	-	114782235-114782284	12qF1	Mus musculus a disintegrin and metallopeptidase domain 6 (Adam6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	tMDCIV	tMDCIV
Mus musculus	RefSeq	ILMN_197404	ILMN_197404	LOC380613	XM_358345.1	XM_358345.1			38075596	XM_358345.1	LOC380613		ILMN_2528019	001430754	S	5234	GGGACCAGACAGGAAAAGTGACCAACTCTAAGAGACCAGCCTATGAGACC										
Mus musculus	RefSeq	ILMN_212464	ILMN_212464	TARSL2	NM_172310.1	NM_172310.1		272396	26986636	NM_172310.1	Tarsl2	NP_758514.1	ILMN_2749382	007400626	S	2079	GTCCCCTCGCCAGGTAATGGTCATCCCAGTAGGCCCAGCTTGTGAAAATT	7	+	72833776-72833825	7qC	Mus musculus threonyl-tRNA synthetase-like 2 (Tarsl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling threonine to threonyl-tRNA, catalyzed by threonyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6435] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules [goid 43039] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + L-threonyl-tRNA(Thr) [goid 4829] [evidence IEA]; Catalysis of the ligation of two substances via a carbon-oxygen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate, to form aminoacyl-tRNA or a related compound [goid 16876] [evidence IEA]	MGC31414; A530046H20Rik	MGC31414; A530046H20Rik
Mus musculus	RefSeq	ILMN_212464	ILMN_212464	TARSL2	NM_172310.1	NM_172310.1		272396	26986636	NM_172310.1	Tarsl2	NP_758514.1	ILMN_1237234	002690270	S	2078	CTGTCCCCTCGCCAGGTAATGGTCATCCCAGTAGGCCCAGCTTGTGAAAA	7	+	72833775-72833824	7qC	Mus musculus threonyl-tRNA synthetase-like 2 (Tarsl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling threonine to threonyl-tRNA, catalyzed by threonyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6435] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules [goid 43039] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + L-threonyl-tRNA(Thr) [goid 4829] [evidence IEA]; Catalysis of the ligation of two substances via a carbon-oxygen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate, to form aminoacyl-tRNA or a related compound [goid 16876] [evidence IEA]	MGC31414; A530046H20Rik	MGC31414; A530046H20Rik
Mus musculus	MEEBO	ILMN_191296	ILMN_191296	PCDH12	scl51489.4_701				8393915	NM_017378	Pcdh12		ILMN_2655362	004390408	S	3470	TGGATGGCGAGATTGTCATTGCCCCTCACCACCAATTATCGAGACAACTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198739	ILMN_198739	LOC213286	XM_141928.3	XM_141928.3			38087196	XM_141928.3	LOC213286		ILMN_2532751	004560279	S	79	TGCCCTAGTGCCTGCTCCCACAGCAAGGTGCTTTGTGATGTCAATGCAGC										
Mus musculus	RefSeq	ILMN_222831	ILMN_245295	1700022A21RIK	XM_906557.2	XM_906557.2		72252	94374291	XM_906557.2	1700022A21Rik	XP_911650.1	ILMN_2755448	002480008	S	1341	CGGCCAGAGCTTTACCTCATCCATCTCAGAGACACATGGAAACCAGGACG				5qA3	PREDICTED: Mus musculus RIKEN cDNA 1700022A21 gene (1700022A21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212964	ILMN_212964	CTPS2	NM_018737.2	NM_018737.2		55936	31542432	NM_018737.2	Ctps2	NP_061207.1	ILMN_2632076	004060291	S	44	GGCGCTTGTTTTGTACTGTCCCTGGAACCCAACGCTGCAGCACTCGCAAT	X	+	158245753-158245802	XqF4-qF5	Mus musculus cytidine 5'-triphosphate synthase 2 (Ctps2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	CTPsH	CTPsH
Mus musculus	RefSeq	ILMN_212964	ILMN_212964	CTPS2	NM_018737.2	NM_018737.2		55936	31542432	NM_018737.2	Ctps2	NP_061207.1	ILMN_2858769	002260138	S	2938	CAGCATCTCACAGCATAGTGCAAGCTGACGTGGAACTAACTGTGCAGTCC	X	+	158376079-158376128	XqF4-qF5	Mus musculus cytidine 5'-triphosphate synthase 2 (Ctps2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	CTPsH	CTPsH
Mus musculus	RefSeq	ILMN_231180	ILMN_231180	OLFR1474	NM_001011842.1	NM_001011842.1		258123	58801443	NM_001011842.1	Olfr1474	NP_001011842.1	ILMN_2926236	003440403	S	431	CTTGGTGCTACACTTGTGGGATCTTACAATCTTCTGTCCATGTTGCTCTG	19	+	13545892-13545941	19qA	Mus musculus olfactory receptor 1474 (Olfr1474), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-26P; MOR202-42	MOR202-26P; MOR202-42
Mus musculus	RefSeq	ILMN_213599	ILMN_238088	HDDC2	NM_027168.2	NM_027168.2		69692	142369607	NM_027168.2	Hddc2	NP_081444.1	ILMN_1244187	006380717	S	418	GCTGGACCAGTGTGAAATGATCCTTCAGGCCTCAGAATATGAAGACCTAG	10	+	31045872-31045921	10qA4	Mus musculus HD domain containing 2 (Hddc2), mRNA.			Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC129436; 2310057G13Rik; MGC129437	MGC129436; 2310057G13Rik; MGC129437
Mus musculus	RefSeq	ILMN_213599	ILMN_238088	HDDC2	NM_027168.2	NM_027168.2		69692	142369607	NM_027168.2	Hddc2	NP_081444.1	ILMN_2638781	003190193	S	232	GGCAGAATGCATCGTTGGGGACATAGCACCCGCAGATAACATCCCTAAAG	10	+	31036129-31036178	10qA4	Mus musculus HD domain containing 2 (Hddc2), mRNA.			Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC129436; 2310057G13Rik; MGC129437	MGC129436; 2310057G13Rik; MGC129437
Mus musculus	RefSeq	ILMN_213972	ILMN_255748	CDKL5	NM_001024624.1	NM_001024624.1		382253	124244036	NM_001024624.1	Cdkl5	NP_001019795.1	ILMN_1246900	002600292	S	2475	GTCCACTCGAGTTTCTTCTCTGCCATCTGATAGCAGTTCTGGTACAAATC					Mus musculus cyclin-dependent kinase-like 5 (Cdkl5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence ISO]	Stk9; BC038161	Stk9; BC038161
Mus musculus	Riken	ILMN_202682	ILMN_202682	A230106F01RIK	ri|A230106F01|PX00063F22|AK020716|1153					AK020716	A230106F01Rik		ILMN_1241635	000670433	S	961	GTCGTCTGAGAGAATACTGAGGCTTCCAGGGCTGGGCGTCAGAAGAAGGC										
Mus musculus	RefSeq	ILMN_257464	ILMN_257464	STX3	NM_011502.2	NM_011502.2		20908	70778979	NM_011502.2	Stx3	NP_035632.1	ILMN_3107114	003400209	A	700	TGAGGGTCGGCACAAGGACATCGTAAGGCTGGAGAGCAGCATCAAGGAGC	19	-	11859923-11859972	19qA	Mus musculus syntaxin 3 (Stx3), transcript variant C, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	AV006285; AW536415; AA960228	AV006285; AW536415; AA960228
Mus musculus	MEEBO	ILMN_184739	ILMN_184739	TCRG-V6	scl45030.1.1_142						Tcrg-V6		ILMN_2421170	006350301	S	19	ACATTGTCTATGAGAAAGATTTTAGTGACGAAAGATATGAGGCAAGGACA										
Mus musculus	RefSeq	ILMN_200714	ILMN_200714	LOC384501	XM_357675.1	XM_357675.1			38085386	XM_357675.1	LOC384501		ILMN_1218502	007200424	S	375	TGTGGCCCAGGAAATAGAGTACAGTGGGGGCAGGGTGGAGCTTTGCACTG										
Mus musculus	Riken	ILMN_206794	ILMN_206794	NFIB	ri|E530004O17|PX00319I23|AK089127|2745					AK089127	Nfib		ILMN_1256427	002350162	S	2555	GATGCATGGTTTCTTCTGTGATAGGATGTTGCGTAGGCTTCTGCGCAGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194790	ILMN_194790	4833418A01RIK	scl20809.16_589				37574097	NM_198005	4833418A01Rik		ILMN_2509622	002510195	S	5	TTACAGTCCCTTTCTGAGAAACCCAGCTGCTCAGAATCTCCCCGGTCATC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_234785	ILMN_234785	DMRTC1B	NM_001039116.1	NM_001039116.1		632708	84993762	NM_001039116.1	Dmrtc1b	NP_001034205.1	ILMN_2929990	006650639	S	656	ATGTGCCACCACGGTCTGCCAACTCTGCCTCACTGACTGGAAGTCTGGAC	X	+	99910043-99910092	XqD	Mus musculus DMRT-like family C1b (Dmrtc1b), mRNA.				Dmrt8.2; Gm714	Dmrt8.2; Gm714
Mus musculus	RefSeq	ILMN_196424	ILMN_254963	1110033M05RIK	XM_911881.2	XM_911881.2		68675	94395517	XM_911881.2	1110033M05Rik	XP_916974.2	ILMN_1252597	003420048	S	3544	CTGGCCTTCTCCCTATTTTTATTCTAGGCACACAGTGGTAGAAAGGTAAG				13qC1	PREDICTED: Mus musculus RIKEN cDNA 1110033M05 gene, transcript variant 6 (1110033M05Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215054	ILMN_254963	1110033M05RIK	XM_911881.2	XM_911881.2		68675	94395517	XM_911881.2	1110033M05Rik	XP_916974.2	ILMN_1257255	001050102	S	321	CCGAGAAGACTTACACAGGTGGAACCAGAAAAGATATGAAGCTCTGGGCG				13qC1	PREDICTED: Mus musculus RIKEN cDNA 1110033M05 gene, transcript variant 6 (1110033M05Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]				
Mus musculus	MEEBO	ILMN_192909	ILMN_192909	9330112M16	scl0329395.1_255						9330112M16		ILMN_2492458	006200471	S	6	CTCTGTCGTACAAATAAAGCTGATTGCCTATCTAGTTGTTCACACATCAC										
Mus musculus	RefSeq	ILMN_216948	ILMN_216948	DQX1	NM_033606.3	NM_033606.3		93838	118130827	NM_033606.3	Dqx1	NP_291084.1	ILMN_2677323	006770711	S	2592	GAGACCCAAAGTGTAGGGTCAGATATACTCCTGGAACCCAAGAGCCAAGA	6	+	83016647-83016696	6qC3	Mus musculus DEAQ RNA-dependent ATPase (Dqx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence ISA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2310066E11Rik	2310066E11Rik
Mus musculus	RefSeq	ILMN_218459	ILMN_218459	TPPP	NM_182839.1	NM_182839.1		72948	33469050	NM_182839.1	Tppp	NP_878259.1	ILMN_2950422	003420377	S	4786	CTGACTCAGAAAGACACTTATACTGACATCTAAGCCACACTTGCTCAGAC	13	+	74172956-74173005	13qC1	Mus musculus tubulin polymerization promoting protein (Tppp), mRNA.				2900041A09Rik; AI849835; Tppp	2900041A09Rik; AI849835; Tppp
Mus musculus	RefSeq	ILMN_218459	ILMN_218459	TPPP	NM_182839.1	NM_182839.1		72948	33469050	NM_182839.1	Tppp	NP_878259.1	ILMN_2696110	002140431	S	4492	CCAACATACTACTGACCATTTTACAGTTCAGGGGTGTGGCCATCTTGGGA	13	+	74172662-74172711	13qC1	Mus musculus tubulin polymerization promoting protein (Tppp), mRNA.				2900041A09Rik; AI849835; Tppp	2900041A09Rik; AI849835; Tppp
Mus musculus	RefSeq	ILMN_212103	ILMN_212103	PCCB	NM_025835.2	NM_025835.2		66904	142348575	NM_025835.2	Pccb	NP_080111.1	ILMN_2622761	001230358	S	1741	CTTGGACACTGATTGATTTGCATAAAGAGTTCTTGGGCCTGGAGTAAAAC	9	-	100882957-100883006	9qE4	Mus musculus propionyl Coenzyme A carboxylase, beta polypeptide (Pccb), nuclear gene encoding mitochondrial protein, mRNA.	A protein complex that catalyzes the first step in long-chain fatty acid biosynthesis. For example, in E. coli the complex is heterohexameric and composed of biotin carbonyl carrier protein, biotin carboxylase and the acetate CoA-transferase complex [goid 9317] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + propanoyl-CoA + HCO3- = ADP + phosphate + (S)-methylmalonyl-CoA [goid 4658] [evidence ISS]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]	R74805; 1300012P06Rik; AI314687	R74805; 1300012P06Rik; AI314687
Mus musculus	RefSeq	ILMN_200767	ILMN_200767	LOC384546	XM_357703.1	XM_357703.1			38085974	XM_357703.1	LOC384546		ILMN_1237686	001340577	S	243	GCAAGACCTCAGGCAAAGGAAATGGTGGGGAATGTCTACCTCACTAAAGG										
Mus musculus	RefSeq	ILMN_212254	ILMN_261593	4933407C03RIK	XM_924798.2	XM_924798.2		74440	94384384	XM_924798.2	4933407C03Rik	XP_929891.2	ILMN_2624451	004850021	S	2043	GCGCCGAGCACCTCATCAAACTGCCTTCCCTCAAGCAGCTCAATCTGTGG				8qE1	PREDICTED: Mus musculus RIKEN cDNA 4933407C03 gene, transcript variant 5 (4933407C03Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_223119	ILMN_223119	MYOZ2	NM_021503.1	NM_021503.1		59006	10946915	NM_021503.1	Myoz2	NP_067478.1	ILMN_1234857	005050181	S	894	GAGCCTACAGAAGACGCCACTGTACCGGAATCAGATGACCTGTGAGAGGG	3	-	122709295-122709300:122709301-122709344	3qG1	Mus musculus myozenin 2 (Myoz2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IPI]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	1110012I24Rik; Myozl2	1110012I24Rik; Myozl2
Mus musculus	RefSeq	ILMN_216724	ILMN_216724	OLR1	NM_138648.1	NM_138648.1		108078	20149719	NM_138648.1	Olr1	NP_619589.1	ILMN_2674519	002190717	S	3579	CGAAGTTCTTAAGTGTCAAATAGTCTTGGATTTATTTTCATGTTATCACT				6qF3	Mus musculus oxidized low density lipoprotein (lectin-like) receptor 1 (Olr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	LOX-1; Scare1; SR-EI	LOX-1; Scare1; SR-EI
Mus musculus	RefSeq	ILMN_220233	ILMN_220233	ASF1B	NM_024184.2	NM_024184.2		66929	118130257	NM_024184.2	Asf1b	NP_077146.1	ILMN_2719473	001340041	S	789	GCACACCTGGAGGGGACCTACAAGCCCTCAGTCAGACATGCTTGGTCATC	8	+	86493284-86493333	8qC3	Mus musculus ASF1 anti-silencing function 1 homolog B (S. cerevisiae) (Asf1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IDA]	Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IDA]	AA409591; 1700003K02Rik	AA409591; 1700003K02Rik
Mus musculus	MEEBO	ILMN_222396	ILMN_222396	4930565D16RIK	scl22012.4.1_114	XM_149327.1			20872512	XM_149327.1	4930565D16Rik		ILMN_2749025	002690736	S	926	TTGGGAGCCCCCGATTTGTCCCAGCTGTCTCTTATGGGCTCAGGGATGGA										
Mus musculus	RefSeq	ILMN_213553	ILMN_248642	OLFR635	NM_147118.1	NM_147118.1		259122	22128748	NM_147118.1	Olfr635	NP_667329.1	ILMN_2638237	006660195	S	841	CATGTTCTCATGGCCAATATCTACCTGCTAGCACCTCCTGTGATGAACCC	7	+	111128530-111128579	7qE3	Mus musculus olfactory receptor 635 (Olfr635), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR5-2	MOR5-2
Mus musculus	RefSeq	ILMN_213937	ILMN_213937	B930007M17RIK	NM_198659.2	NM_198659.2		381476	142386096	NM_198659.2	B930007M17Rik	NP_941061.1	ILMN_2642473	006450669	S	2259	CAGAAGTATATTAAAATCTGTATGGGTTAGGTTTTGGCAATTCTGCACAC	3	+	139372704-139372753	3qH1	Mus musculus RIKEN cDNA B930007M17 gene (B930007M17Rik), mRNA.				Gm1017	Gm1017
Mus musculus	RefSeq	ILMN_213527	ILMN_213527	5830483C08RIK	NM_177331.3	NM_177331.3		209334	31560838	NM_177331.3	5830483C08Rik	NP_796305.2	ILMN_2637939	000010482	S	4088	GTGAATGACTGGATCCTGAAAGTAGAAGATCAAAGGAATCCATCAAAAAC	12	-	11246856-11246905	12qA1.1	Mus musculus RIKEN cDNA 5830483C08 gene (5830483C08Rik), mRNA.				MGC115970	MGC115970
Mus musculus	RefSeq	ILMN_223294	ILMN_223294	OLFR798	NM_146556.2	NM_146556.2		258549	121582551	NM_146556.2	Olfr798	NP_666767.2	ILMN_1235950	002350088	S	873	AAACAAACAAGTAAAAGAATCCTTCAGGAATTTGATCAAAAAATGTATTT	10	-	129062193-129062242	10qD3	Mus musculus olfactory receptor 798 (Olfr798), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR108-1	MOR108-1
Mus musculus	RefSeq	ILMN_201091	ILMN_201091	LOC381999	XM_356062.1	XM_356062.1			38089084	XM_356062.1	LOC381999		ILMN_2541047	006840575	S	1	ATGAGTATGCTCAGGCTACAGAAGAGGCTTGCCTCTAGTGTCCTCCGCTG										
Mus musculus	RefSeq	ILMN_198756	ILMN_198756	EG236893	XM_141935.1	XM_141935.1		236893	20984657	XM_141935.1	EG236893	XP_141935.1	ILMN_1225603	003130286	S	1073	ATGTGCCTGGCAATGCCTATGACAGTCCTCCTTTAGGGTACATAGCCCAC	X	-	89339055-89339104	XqC2	PREDICTED: Mus musculus predicted gene, EG236893 (EG236893), mRNA.					
Mus musculus	RefSeq	ILMN_198286	ILMN_198286	LOC381150	XM_358516.1	XM_358516.1			38083639	XM_358516.1	LOC381150		ILMN_1234756	002320370	S	369	CCGGGCCAACAGCCCCATACCCACCTTATCCACAACAGCCATCTCTTCTG										
Mus musculus	MEEBO	ILMN_192368	ILMN_192368	2810438F06RIK	scl072752.1_182						2810438F06Rik		ILMN_1241018	001240382	S	5	GCTGTGCTCCGCTGCAAGGTGCTGGATTATGAGGGCCTTTTACTGTCTCC										
Mus musculus	MEEBO	ILMN_196093	ILMN_196093	HIST2H3C1	scl22864.1.66_0				9506766	NM_019469	Hist2h3c1		ILMN_2521561	001820068	S	18	GAGTTTCAAGTCGCTGTCTCCGCCCCGCCGCGGGGAAGACTGCGCCTATA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208954	ILMN_208954	COPE	NM_021538.1	NM_021538.1		59042	10946971	NM_021538.1	Cope	NP_067513.1	ILMN_2630767	006040433	S	808	CTGGGCAAGCCCCCTGAGGTGACAAACCGATACTTGTCACAGCTGAAGGA	8	+	72835577-72835595:72836605-72836635	8qB3.3	Mus musculus coatomer protein complex, subunit epsilon (Cope), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Cope1; 1110005D17Rik	Cope1; 1110005D17Rik
Mus musculus	RefSeq	ILMN_208954	ILMN_208954	COPE	NM_021538.1	NM_021538.1		59042	10946971	NM_021538.1	Cope	NP_067513.1	ILMN_2630769	006280091	S	812	GGCAAGCCCCCTGAGGTGACAAACCGATACTTGTCACAGCTGAAGGATGC	8	+	72835581-72835595:72836605-72836639	8qB3.3	Mus musculus coatomer protein complex, subunit epsilon (Cope), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Cope1; 1110005D17Rik	Cope1; 1110005D17Rik
Mus musculus	RefSeq	ILMN_208954	ILMN_208954	COPE	NM_021538.1	NM_021538.1		59042	10946971	NM_021538.1	Cope	NP_067513.1	ILMN_2630768	006510097	S	810	GGGCAAGCCCCCTGAGGTGACAAACCGATACTTGTCACAGCTGAAGGATG	8	+	72835579-72835595:72836605-72836637	8qB3.3	Mus musculus coatomer protein complex, subunit epsilon (Cope), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Cope1; 1110005D17Rik	Cope1; 1110005D17Rik
Mus musculus	RefSeq	ILMN_208954	ILMN_208954	COPE	NM_021538.1	NM_021538.1		59042	10946971	NM_021538.1	Cope	NP_067513.1	ILMN_2944646	004850746	S	946	TTAAAGTGGAGATGCCCTGGTGACCCCAACTGTGTGCCGCGGGATGCTGT	8	+	72836802-72836805:72836806-72836851	8qB3.3	Mus musculus coatomer protein complex, subunit epsilon (Cope), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Cope1; 1110005D17Rik	Cope1; 1110005D17Rik
Mus musculus	RefSeq	ILMN_221229	ILMN_221229	COMMD4	NM_025417.1	NM_025417.1		66199	13384805	NM_025417.1	Commd4	NP_079693.1	ILMN_2798183	004760646	S	523	GTACCCAGGCCCAACCTGTTTCCATGTCCCTCTCGGCAGACAAGTTCCAG	9	-	56953560-56953609	9qB	Mus musculus COMM domain containing 4 (Commd4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110039H05Rik	1110039H05Rik
Mus musculus	MEEBO	ILMN_186769	ILMN_186769	6330509M23RIK	scl63.1.1_175						6330509M23Rik		ILMN_2438351	001940296	S	2	CCACACCAGTTTCCAATGGTAACATCTTTTAAATAAAGTAAAATATTTCC										
Mus musculus	MEEBO	ILMN_192979	ILMN_192979	IGHV9S5_L14364_IG_HEAVY_VARIABLE_9S5_82	IGHV9S5_L14364_Ig_heavy_variable_9S5_82						IGHV9S5_L14364_Ig_heavy_variable_9S5_82		ILMN_2493097	002100154	S	11	GCAGTGGGTGCAAAAGATGCCAGGAAAGGGTTTGAAGTGGATTGGCTGGA										
Mus musculus	MEEBO	ILMN_193660	ILMN_193660	4933428A15RIK	scl33795.5_730				29788791	NM_027756	4933428A15Rik		ILMN_2499264	005670176	S	8	CCATGGCTTGTGATCCATCCTGTAGTCTGATTGTTGCTTTAATAAAGGGT										
Mus musculus	MEEBO	ILMN_219871	ILMN_219871	BC062650	scl19256.3.3567_0	NM_177650.2			31343333	NM_177650.2	BC062650		ILMN_1238995	002850102	S	4422	GAGGGTACATGAGAACGAACACTGCGTGAATACGGATAGTGATGGGCCTG										
Mus musculus	RefSeq	ILMN_192657	ILMN_192657	TTL	NM_027192.1	NM_027192.1		69737	28076928	NM_027192.1	Ttl	NP_081468.1	ILMN_2490127	006380601	S	1302	GTGCCGCAGCAGCCGGCTGCGTTCGTCAAGCTGTGAAGCACCGGAAGGCA	2	+	128918801-128918850	2qF1	Mus musculus tubulin tyrosine ligase (Ttl), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IC ]	Any process that modulates the rate, direction or extent of axon extension [goid 30516] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IMP]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	2700049H19Rik; AI848570; 2410003M22Rik	2700049H19Rik; AI848570; 2410003M22Rik
Mus musculus	RefSeq	ILMN_192657	ILMN_192657	TTL	NM_027192.1	NM_027192.1		69737	28076928	NM_027192.1	Ttl	NP_081468.1	ILMN_2961165	004730630	S	1925	CGCCAGTGCATGCTGCTCACTGCATGTTTTAGAAACAAAAGCCGCAGGCC	2	+	128919424-128919473	2qF1	Mus musculus tubulin tyrosine ligase (Ttl), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IC ]	Any process that modulates the rate, direction or extent of axon extension [goid 30516] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IMP]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	2700049H19Rik; AI848570; 2410003M22Rik	2700049H19Rik; AI848570; 2410003M22Rik
Mus musculus	RefSeq	ILMN_191128	ILMN_239733	FBXW7	NM_080428.2	NM_080428.2		50754	21218433	NM_080428.2	Fbxw7	NP_536353.2	ILMN_2676431	004060725	S	91	AGGGCATAGTCTCCTCCAATAATCTTGTGGGTTCTCGCTCATTATTCCCC	3	+	84756223-84756272	3qF1	Mus musculus F-box and WD-40 domain protein 7 (Fbxw7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AGO; Fbw7; SEL-10; Fbx30; Fbwd6; Cdc4; Fbxw6; Fbxo30; 1110001A17Rik	AGO; Fbw7; SEL-10; Fbx30; Fbwd6; Cdc4; Fbxw6; Fbxo30; 1110001A17Rik
Mus musculus	RefSeq	ILMN_191128	ILMN_239733	FBXW7	NM_080428.2	NM_080428.2		50754	21218433	NM_080428.2	Fbxw7	NP_536353.2	ILMN_2681824	001990739	S	2062	ATGATGAATTTTGTCCAACTGTGTAGACAATATACTCCCTACCCTTCCCC	3	+	84781473-84781522	3qF1	Mus musculus F-box and WD-40 domain protein 7 (Fbxw7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AGO; Fbw7; SEL-10; Fbx30; Fbwd6; Cdc4; Fbxw6; Fbxo30; 1110001A17Rik	AGO; Fbw7; SEL-10; Fbx30; Fbwd6; Cdc4; Fbxw6; Fbxo30; 1110001A17Rik
Mus musculus	RefSeq	ILMN_239733	ILMN_239733	FBXW7	NM_080428.2	NM_080428.2		50754	21218433	NM_080428.2	Fbxw7	NP_536353.2	ILMN_2844699	003990079	S	1888	GGTGAATTTATCCGAAACCTCGTCACATTGGAGAGTGGGGGGAGCGGGGG	3	+	84781299-84781348	3qF1	Mus musculus F-box and WD-40 domain protein 7 (Fbxw7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AGO; Fbw7; SEL-10; Fbx30; Fbwd6; Cdc4; Fbxw6; Fbxo30; 1110001A17Rik	AGO; Fbw7; SEL-10; Fbx30; Fbwd6; Cdc4; Fbxw6; Fbxo30; 1110001A17Rik
Mus musculus	RefSeq	ILMN_213689	ILMN_213689	BRF1	NM_028193.3	NM_028193.3		72308	118130445	NM_028193.3	Brf1	NP_082469.2	ILMN_1220096	004570739	S	2327	GCTGGACTCCAAGTGTATCTGTTTTATGGGTGTCAGATGGGCCCTGGGGC	12	-	114198451-114198500	12qF1	Mus musculus BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) (Brf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	2510002F24Rik; TAF3C; TAFIII90; GTF3B; TFIIIB90	2510002F24Rik; TAF3C; TAFIII90; GTF3B; TFIIIB90
Mus musculus	RefSeq	ILMN_221597	ILMN_221597	OAS1D	NM_133893.2	NM_133893.2		100535	141801731	NM_133893.2	Oas1d	NP_598654.1	ILMN_2737613	001090451	S	1116	GCATCTGCCTAGGAGACTCCAGAGTCAGGGGCATGTCCTCCTCTTCTGTA	5	+	121371084-121371133	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1D (Oas1d), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor [goid 51348] [evidence IDA]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]; Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. Requires binding of double-stranded RNA [goid 1730] [evidence IDA]	oasl8; AA536864; C85127	oasl8; AA536864; C85127
Mus musculus	RefSeq	ILMN_200135	ILMN_200135	LOC385623	XM_359235.1	XM_359235.1			38080625	XM_359235.1	LOC385623		ILMN_2537713	002070753	S	206	CTGATGGAGGCAGAGATCAGAGGATTTCTGAGCAGGTGGGGACCTCAGAG										
Mus musculus	Riken	ILMN_205976	ILMN_205976	EMU2-PENDING	ri|D130059G12|PX00185H06|AK051600|1989					AK051600	Emu2-pending		ILMN_1234674	002000626	S	1748	ACCAGAGGGAGGCAGAGGAGAGCAGTTGAAGGAGGAGCAGGTCTGGCTAA										
Mus musculus	RefSeq	ILMN_207288	ILMN_244528	3830402I07RIK	NM_001001187.2	NM_001001187.2		408068	142374533	NM_001001187.2	3830402I07Rik	NP_001001187.1	ILMN_1253241	003440441	S	328	GCTCCCGGGTGTGTTAGGAGGAGGGAATCAGAGAACAGAGTGGGAAATTC	13	-	67773892-67773941	13qB3	Mus musculus RIKEN cDNA 3830402I07 gene (3830402I07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199179	ILMN_242248	EG243642	XM_145024.8	XM_145024.8		243642	149255334	XM_145024.8	EG243642	XP_145024.7	ILMN_2534332	007000435	S	532	GGCTACTGGGGGAACAAGATTGGCAAGCCCCACACTGTTCCATGCAAGGT	6	+	127184257-127184306	6qF3	PREDICTED: Mus musculus predicted gene, EG243642 (EG243642), mRNA.					
Mus musculus	MEEBO	ILMN_195867	ILMN_195867	STYX	scl0056291.2_161				46852142	NM_019637	Styx		ILMN_2519465	003440487	S	7	TCACTGTGCATTCAAGACTAGTAAAAACAAACAAACAAATAACAGCTTTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_196456	ILMN_196456	6330503C17RIK	XM_181410.4	XM_181410.4			38078805	XM_181410.4	6330503C17Rik		ILMN_1216827	003290128	S	1091	AGGGGAAACAGAGCAGGATCTGGAGGCAGACTTCCCATCAGGTTTGTACC										
Mus musculus	RefSeq	ILMN_231443	ILMN_231443	UHMK1	NM_010633.3	NM_010633.3		16589	40254329	NM_010633.3	Uhmk1	NP_034763.3	ILMN_2958626	001260193	S	609	GGGCTACGTCCATGCAGACCTCAAACCACGAAACATCCTGTGGAGTGCGG	1	-	172142422-172142471	1qH3	Mus musculus U2AF homology motif (UHM) kinase 1 (Uhmk1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Kist; KIS; AI449218; 4930500M09Rik; 4732477C12Rik; AA673513; AU021979	Kist; KIS; AI449218; 4930500M09Rik; 4732477C12Rik; AA673513; AU021979
Mus musculus	RefSeq	ILMN_240131	ILMN_240131	A1BG	NM_001081067.1	NM_001081067.1		117586	124486701	NM_001081067.1	A1bg	NP_001074536.1	ILMN_3065652	002190452	I	674	GGCTCCACCCACTCTGTGTTTGATGGGAAACTACCTAATGATCTACCCCC	15	-	60751431-60751480	15qD1	Mus musculus alpha-1-B glycoprotein (A1bg), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C44	C44
Mus musculus	RefSeq	ILMN_197704	ILMN_240131	A1BG	NM_001081067.1	NM_001081067.1		117586	124486701	NM_001081067.1	A1bg	NP_001074536.1	ILMN_2529071	000580450	S	1607	CACTGGCTAATTGCTTCACCAAGGTCAGTGTGGAAAGGCCCTGTGGCAAC	15	-	60749310-60749359	15qD1	Mus musculus alpha-1-B glycoprotein (A1bg), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C44	C44
Mus musculus	Riken	ILMN_206672	ILMN_206672	C230027D02RIK	ri|C230027D02|PX00174O08|AK082235|1007					AK082235	C230027D02Rik		ILMN_2581832	003290086	S	719	TCTCCGCCAACCTCACAAGTGCTGGAATTAGCAGGTATGAGCCGCCTCAC										
Mus musculus	RefSeq	ILMN_197390	ILMN_241687	GM1967	NM_001033452.3	NM_001033452.3		381411	142363068	NM_001033452.3	Gm1967	NP_001028624.2	ILMN_1237982	006520180	S	2053	GTAGGAGGGAGAAGGCCTAAGGAACCCTGGAGAGGTAAAGGCTGTTCCCC	2	-	93695585-93695634	2qE1	Mus musculus gene model 1967, (NCBI) (Gm1967), mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]	RP23-41P22.2	RP23-41P22.2
Mus musculus	RefSeq	ILMN_217929	ILMN_229198	RAB11FIP5	NM_001003955.2	NM_001003955.2		52055	55743141	NM_001003955.2	Rab11fip5	NP_001003955.1	ILMN_1216781	003140139	S	5914	GGTGTCCTGCAGAGAGGTCCTGAACTGAGGCCAGGGTTTTGTTCATTGTC	6	-	85291711-85291760	6qC3	Mus musculus RAB11 family interacting protein 5 (class I) (Rab11fip5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		RIP11; C75969; D6Ertd32e; mKIAA0857; GAF1; 9130206P09Rik	RIP11; C75969; D6Ertd32e; mKIAA0857; GAF1; 9130206P09Rik
Mus musculus	RefSeq	ILMN_229198	ILMN_229198	RAB11FIP5	NM_001003955.2	NM_001003955.2		52055	55743141	NM_001003955.2	Rab11fip5	NP_001003955.1	ILMN_3139693	005050609	A	5909	GCAGGGGTGTCCTGCAGAGAGGTCCTGAACTGAGGCCAGGGTTTTGTTCA	6	-	85291716-85291765	6qC3	Mus musculus RAB11 family interacting protein 5 (class I) (Rab11fip5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		RIP11; C75969; D6Ertd32e; mKIAA0857; GAF1; 9130206P09Rik	RIP11; C75969; D6Ertd32e; mKIAA0857; GAF1; 9130206P09Rik
Mus musculus	RefSeq	ILMN_229198	ILMN_229198	RAB11FIP5	NM_001003955.2	NM_001003955.2		52055	55743141	NM_001003955.2	Rab11fip5	NP_001003955.1	ILMN_3062163	006200333	I	3290	TGTCAGGAAAGCCAAGATCCCCCCAGCTTCCCATCCATATCACCACCAGG	6	-	85292328-85292367:85297774-85297783	6qC3	Mus musculus RAB11 family interacting protein 5 (class I) (Rab11fip5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		RIP11; C75969; D6Ertd32e; mKIAA0857; GAF1; 9130206P09Rik	RIP11; C75969; D6Ertd32e; mKIAA0857; GAF1; 9130206P09Rik
Mus musculus	RefSeq	ILMN_210187	ILMN_210187	SYT3	NM_016663.2	NM_016663.2		20981	31560476	NM_016663.2	Syt3	NP_057872.2	ILMN_1244378	003780707	S	2060	TACCCCTCCTTCTCCTGGAGGTGTGAGGCTAGGAGGCAGCAGGCCCAGCT	7	+	51655028-51655077	7qB4	Mus musculus synaptotagmin III (Syt3), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	syt III; AI385753	syt III; AI385753
Mus musculus	RefSeq	ILMN_215397	ILMN_215397	1810033M07RIK	NM_026983.1	NM_026983.1		69187	21746144	NM_026983.1	1810033M07Rik	NP_081259.1	ILMN_2888940	004280280	S	753	TGGGACACACTGCCCATCGCAGAGGTTACGGTGGAGAAGGTCCGAGGCTT	6	-	136872250-136872299	6qG1	Mus musculus RIKEN cDNA 1810033M07 gene (1810033M07Rik), mRNA.				MGC129514; MGC129515; 1810047B09Rik	MGC129514; MGC129515; 1810047B09Rik
Mus musculus	RefSeq	ILMN_211076	ILMN_211076	LYL1	NM_008535.2	NM_008535.2		17095	113865988	NM_008535.2	Lyl1	NP_032561.2	ILMN_2612255	000360195	S	1431	CCCTGTAAAAGGATCTCAGGTCGCCCAGATGAGGAAACGCCCTGTAGCTC	8	+	87228245-87228294	8qC3	Mus musculus lymphoblastomic leukemia 1 (Lyl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Lyl-1	Lyl-1
Mus musculus	RefSeq	ILMN_213065	ILMN_213065	SSNA1	NM_023464.2	NM_023464.2		68475	115311553	NM_023464.2	Ssna1	NP_075953.1	ILMN_3161639	007570682	S	532	GCCCAGAGGGGCAATTTCTGACCTCCACCTGCCTAGACAAGAAAAGCCCT	2	-	25126841-25126890	2qA3	Mus musculus Sjogren's syndrome nuclear autoantigen 1 (Ssna1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	NA14; 1190004J23Rik; 1110003H09Rik; N14; AA934184	NA14; 1190004J23Rik; 1110003H09Rik; N14; AA934184
Mus musculus	MEEBO	ILMN_191157	ILMN_191157	SCL000896.1_70	scl000896.1_70	M17320.1			623197	M17320.1	scl000896.1_70		ILMN_1229954	000010647	S	6	CTCAGACATTCAGCAGCCAAGCTGACAATCCCACACTCACGCCTGCTCCC										
Mus musculus	RefSeq	ILMN_200913	ILMN_200913	LOC386559	XM_359401.1	XM_359401.1			38087009	XM_359401.1	LOC386559		ILMN_2540444	001570204	S	181	GCTCGGGGCCAACACAATGCTGCCAACTCTGCAACTGGCTTTGAGACACA										
Mus musculus	RefSeq	ILMN_200125	ILMN_200125	LOC385770	XM_358940.1	XM_358940.1			38080512	XM_358940.1	LOC385770		ILMN_2537678	001510500	S	391	TCAGCGATCCATGGGATGAATGTTGGCGAACCCGGAGTCATGGGTAAACT										
Mus musculus	RefSeq	ILMN_190998	ILMN_215349	TAF6	NM_009315.3	NM_009315.3		21343	118130471	NM_009315.3	Taf6	NP_033341.1	ILMN_2475184	005310612	S	2226	TACAATATCTAAAAAGAAAGTCACTGGGGAAAACCTTTCCTCCTTCCTCC				5qG2	Mus musculus TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51090] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	 [goid 16986] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	AW549759; 80kDa; p80; Taf2e	AW549759; 80kDa; p80; Taf2e
Mus musculus	RefSeq	ILMN_215349	ILMN_215349	TAF6	NM_009315.3	NM_009315.3		21343	118130471	NM_009315.3	Taf6	NP_033341.1	ILMN_1241137	005270291	S	2176	GGGAGGAAGGAGGAAAGGTTTTCCCCAGTGACTTTCTTTTTAGATATTGT	5	-	138619883-138619932	5qG2	Mus musculus TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51090] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	 [goid 16986] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	AW549759; 80kDa; p80; Taf2e	AW549759; 80kDa; p80; Taf2e
Mus musculus	RefSeq	ILMN_215349	ILMN_215349	TAF6	NM_009315.3	NM_009315.3		21343	118130471	NM_009315.3	Taf6	NP_033341.1	ILMN_1252302	005130326	S	1892	ATACATTGTGGTCTCTCTTCCCCCAACAGGGGAAGGCAAAGGAGGCCCTC	5	-	138620167-138620216	5qG2	Mus musculus TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51090] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	 [goid 16986] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	AW549759; 80kDa; p80; Taf2e	AW549759; 80kDa; p80; Taf2e
Mus musculus	RefSeq	ILMN_243673	ILMN_243673	JPH4	NM_001003829.1	NM_001003829.1		319984	51491826	NM_001003829.1	Jph4	NP_001003829.1	ILMN_3103549	000160289	A	1037	AGTGGCTATGGAGTGAGCCAGAGATCCAACGGGCTGCGCTACGAAGGCGA	14	-	54067705-54067754	14qC3	Mus musculus junctophilin 4 (Jph4), transcript variant b, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9330157P13Rik; AI425998; JPHL1; JP-4	9330157P13Rik; AI425998; JPHL1; JP-4
Mus musculus	RefSeq	ILMN_193565	ILMN_261802	HNRNPD	NM_001077265.1	NM_001077265.1		11991	116256511	NM_001077265.1	Hnrnpd	NP_001070733.1	ILMN_2498368	001430148	S	1250	CGGAGGTTATGGAGGATATGACTACACTGGTTACAACAACTACTATGGAT	5	-	100392764-100392813	5qE4	Mus musculus heterogeneous nuclear ribonucleoprotein D (Hnrnpd), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	C230004L04; Auf1	C230004L04; Auf1
Mus musculus	RefSeq	ILMN_256709	ILMN_256709	CHST14	NM_028117.2	NM_028117.2		72136	31980714	NM_028117.2	Chst14	NP_082393.2	ILMN_2981665	000110301	S	1784	CATTTTTCTAAGGAAAGAGAAACGGAAGTGGGGCCCTTACCTCGAAGCTC	2	+	118754043-118754092	2qE5	Mus musculus carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 (Chst14), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of dermatan sulfate, any glycosaminoglycan with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units [goid 30208] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-acetyl-D-galactosamine = adenosine 3',5'-bisphosphate + N-acetyl-D-galactosamine 4-sulfate [goid 1537] [evidence ISO]	D4st1; 2600016L03Rik	D4st1; 2600016L03Rik
Mus musculus	RefSeq	ILMN_214154	ILMN_214154	OLFR460	NM_146383.1	NM_146383.1		258381	22129534	NM_146383.1	Olfr460	NP_666495.1	ILMN_2644863	003400687	S	790	AGACCCAGGCAGCCGACTACAATAGGGTGGTTTCCTTGATGATTTCGATC	6	+	40522176-40522225	6qB1	Mus musculus olfactory receptor 460 (Olfr460), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR120-2	MOR120-2
Mus musculus	MEEBO	ILMN_215344	ILMN_215344	A730037L19RIK	scl50545.3_258	NM_177112.2			31342826	NM_177112.2	A730037L19Rik		ILMN_1246511	000520458	S	2262	CCTCCTGAAAACAAAGAGTCATCTGACTCATCCATCGGGTGTGGGAACCC										
Mus musculus	Riken	ILMN_206204	ILMN_206204	C130019M09RIK	ri|C130019M09|PX00167L18|AK081472|1199					AK081472	C130019M09Rik		ILMN_1236394	004250097	S	763	CCATCGGTTGGAGAAGGCTGTGTGAGCCCCTTGTCGGAGTCAGAGCATCT										
Mus musculus	RefSeq	ILMN_188117	ILMN_247968	SLC5A2	NM_133254.3	NM_133254.3		246787	133892427	NM_133254.3	Slc5a2	NP_573517.1	ILMN_1242535	001260398	S	1182	CATCTTTAACAGCAGTAGCACGCTCTTCACCATGGATATCTACACGCGCC	7	+	135414092-135414141	7qF3	Mus musculus solute carrier family 5 (sodium/glucose cotransporter), member 2 (Slc5a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Sglt2	Sglt2
Mus musculus	RefSeq	ILMN_210847	ILMN_210847	CHI3L1	NM_007695.2	NM_007695.2		12654	142347793	NM_007695.2	Chi3l1	NP_031721.1	ILMN_2609813	000150114	S	1427	CCTCCCTTTACCCAGCCTGACCAAAGGACACCACTTGGATCAAGTAGGCA	1	+	136086423-136086472	1qE4	Mus musculus chitinase 3-like 1 (Chi3l1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]	Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]	AW208766; brp-39; Brp39; Gp39	AW208766; brp-39; Brp39; Gp39
Mus musculus	MEEBO	ILMN_217014	ILMN_217014	3010033K07RIK	scl34354.2.1_17	XM_150130.2			38089430	XM_150130.2	3010033K07Rik		ILMN_2678144	003440176	S	482	CGACATGGTGTTATAATGTCTGGAGGCGGTACATGCCTCTGGTCTTTGGC										
Mus musculus	RefSeq	ILMN_217184	ILMN_248395	OLFR1341	NM_146853.2	NM_146853.2		258852	124248517	NM_146853.2	Olfr1341	NP_667064.2	ILMN_2679993	000450341	S	661	ATTTTCACTTCCATCTTGAAGATCCGTTCAGCACAGGGGCGACTGAAAGC	4	+	118382674-118382723	4qD2.1	Mus musculus olfactory receptor 1341 (Olfr1341), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR258-1	MOR258-1
Mus musculus	Riken	ILMN_207176	ILMN_207176	F830030F15RIK	ri|F830030F15|PL00006B10|AK089829|2629					AK089829	F830030F15Rik		ILMN_1221980	002000092	S	1856	CCAGGAATATGTCCCCGGTGTGAGAAGGGCCGCCACTGGACAAAAGATTG										
Mus musculus	RefSeq	ILMN_246052	ILMN_246052	BRCA2	NM_001081001.1	NM_001081001.1		12190	124487408	NM_001081001.1	Brca2	NP_001074470.1	ILMN_3109564	005570356	A	10366	TGATTCCACAAGGAACCCCCAGCCAGCACAGAGGCCAGACCAGCAAGTAG	5	+	151342030-151342079	5qG3	Mus musculus breast cancer 2 (Brca2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-C radiation stimulus. UV-C radiation (UV-C light) spans the wavelengths 100 to 290 nm [goid 10225] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IMP]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, resulting in the induction of the transcription of p21 (also known as WAF1, CIP1 and SDI1) or any equivalent protein, in response to the detection of DNA damage [goid 6978] [evidence IMP]; Any process that prevents the collapse of stalled replication forks [goid 48478] [evidence IMP]; The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching [goid 43009] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A cell cycle process that modulates the frequency, rate or extent of the progression through the S phase of the mitotic cell cycle [goid 7090] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IGI]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Cytokinesis that occurs in the context of cell cycle progression and result in the division of the cytoplasm of a cell and its separation into two daughter cells [goid 33205] [evidence IMP]	Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	Fancd1; RAB163; AW045498; AI256696	Fancd1; RAB163; AW045498; AI256696
Mus musculus	RefSeq	ILMN_206959	ILMN_246052	BRCA2	NM_001081001.1	NM_001081001.1		12190	124487408	NM_001081001.1	Brca2	NP_001074470.1	ILMN_1243975	003830168	S	336	TGACTCCCACCATAGCCACTTTCGGGTGCTGTGATGTATCTAGTAGCCAC	5	+	151322705-151322754	5qG3	Mus musculus breast cancer 2 (Brca2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-C radiation stimulus. UV-C radiation (UV-C light) spans the wavelengths 100 to 290 nm [goid 10225] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IMP]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, resulting in the induction of the transcription of p21 (also known as WAF1, CIP1 and SDI1) or any equivalent protein, in response to the detection of DNA damage [goid 6978] [evidence IMP]; Any process that prevents the collapse of stalled replication forks [goid 48478] [evidence IMP]; The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching [goid 43009] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A cell cycle process that modulates the frequency, rate or extent of the progression through the S phase of the mitotic cell cycle [goid 7090] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IGI]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Cytokinesis that occurs in the context of cell cycle progression and result in the division of the cytoplasm of a cell and its separation into two daughter cells [goid 33205] [evidence IMP]	Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	Fancd1; RAB163; AW045498; AI256696	Fancd1; RAB163; AW045498; AI256696
Mus musculus	MEEBO	ILMN_189390	ILMN_189390	9330169B04RIK	scl0319999.1_86						9330169B04Rik		ILMN_2460840	003850189	S	13	CACTGTGACTTCTGTAATGTGTTTAACGACTTCTCGTGCACTATCACGAA										
Mus musculus	Riken	ILMN_204722	ILMN_204722	B930009L07RIK	ri|B930009L07|PX00162C06|AK080999|3262					AK080999	B930009L07Rik		ILMN_1237201	004220452	S	2914	GGCAAAATCAGTCAAGCCTGTTACTTGGTGGCAAATACACACCCACCCAC										
Mus musculus	Riken	ILMN_205538	ILMN_205538	D130059J11RIK	ri|D130059J11|PX00185P03|AK051603|2713					AK051603	D130059J11Rik		ILMN_1234289	003400220	S	2354	GGCTGTAAGAGGGCCGTGGCCGATGAACGGGCCTGTGCTTGCTTTTGTTA										
Mus musculus	RefSeq	ILMN_217025	ILMN_217025	OLFR39	NM_146825.1	NM_146825.1		258822	22129206	NM_146825.1	Olfr39	NP_667036.1	ILMN_2678254	003420747	S	544	GCTCAAATTCTCAGAGTAGCAAGCTCTGATATTCTCATCAATAATATCGC	9	+	20090688-20090737	9qA3	Mus musculus olfactory receptor 39 (Olfr39), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR144-1	MOR144-1
Mus musculus	RefSeq	ILMN_208749	ILMN_208749	HIST1H2BA	NM_175663.1	NM_175663.1		319177	28316749	NM_175663.1	Hist1h2ba	NP_783594.1	ILMN_2589152	003940441	S	65	GACCCAGAAAAAGGAGGGCCGGAAACGTAAGAGATGCCGCAAGGAGAGCT	13	-	24025911-24025960	13qA3.1	Mus musculus histone cluster 1, H2ba (Hist1h2ba), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218331	ILMN_218331	OLFR1087	NM_146846.1	NM_146846.1		258843	22129174	NM_146846.1	Olfr1087	NP_667057.1	ILMN_1220278	006560300	S	626	CCTCCCTTCTAGTGGTCCTTGTTTCTTACCTGTTCATCCTTATAGCCATT	2	-	86530455-86530504	2qD	Mus musculus olfactory receptor 1087 (Olfr1087), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR188-5	MOR188-5
Mus musculus	MEEBO	ILMN_192375	ILMN_192375	SSFA2	scl20716.18_43				37620166	NM_080558	Ssfa2		ILMN_2487517	007400468	S	10	CCCTCTGCGGTGTAATTGCATTATAGCTATGTGCCTTGTGGTAAGCACTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Mus musculus	RefSeq	ILMN_214964	ILMN_214964	CENPT	NM_177150.2	NM_177150.2		320394	142380926	NM_177150.2	Cenpt	NP_796124.1	ILMN_2653972	003170154	S	1501	CCTGCCCTTGGAGTACCGGCAACAACTTATCCCTTGTGCATTCAGTGGCA	8	-	108368794-108368843	8qD3	Mus musculus centromere protein T (Cenpt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]			G630055P03Rik	G630055P03Rik
Mus musculus	RefSeq	ILMN_187703	ILMN_330471	LOC100044215	XM_001471742.1	XM_001471742.1		100044215	149252134	XM_001471742.1	LOC100044215	XP_001471792.1	ILMN_2446401	005810113	S	1349	TCCACTGTCTCCCTCCCCCGCTTTCTTACTTTCTGAGGGTTGGGAAGGTA					PREDICTED: Mus musculus hypothetical protein LOC100044215 (LOC100044215), mRNA.					
Mus musculus	RefSeq	ILMN_202033	ILMN_242593	2210015D19RIK	XM_900750.2	XM_900750.2		76508	94389886	XM_900750.2	2210015D19Rik	XP_905843.1	ILMN_1259535	000450131	S	328	GGTCCCCCTTGCTGACTAGTGGACACGGAAGCTGAGGAAGAACAGATGGC	11	+	5680353-5680402	11qA1	PREDICTED: Mus musculus RIKEN cDNA 2210015D19 gene, transcript variant 5 (2210015D19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194967	ILMN_242593	2210015D19RIK	XM_900750.2	XM_900750.2		76508	94389886	XM_900750.2	2210015D19Rik	XP_905843.1	ILMN_2511327	000150132	S	1781	GTGTGCTGTGACTACACTATGACGTGTGTCCTGCTGGTATTTTAACATCA	11	+	5681806-5681855	11qA1	PREDICTED: Mus musculus RIKEN cDNA 2210015D19 gene, transcript variant 5 (2210015D19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221218	ILMN_221218	POLR3B	NM_027423.1	NM_027423.1		70428	46195738	NM_027423.1	Polr3b	NP_081699.1	ILMN_2732627	006420296	S	4723	TGCGAGGACTTTGCAGATCTCACTCCAGGCTCATCCGGATGAGTCACGAC	10	+	84189816-84189865	10qC1	Mus musculus polymerase (RNA) III (DNA directed) polypeptide B (Polr3b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	A330032P03Rik; RPC2; C85372; 2700078H01Rik	A330032P03Rik; RPC2; C85372; 2700078H01Rik
Mus musculus	RefSeq	ILMN_217153	ILMN_217153	TADA1L	NM_030245.2	NM_030245.2		27878	31981395	NM_030245.2	Tada1l	NP_084521.1	ILMN_2679662	004390767	S	1543	CAGAATCTGTTAGTGACTAGTTAGCAACTGGAGTTCCCAAGCAACCCGCT	1	+	168323283-168323332	1qH2.3	Mus musculus transcriptional adaptor 1 (HFI1 homolog, yeast) like (Tada1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		2900026B15Rik; Staf42; D1Ertd251e	2900026B15Rik; Staf42; D1Ertd251e
Mus musculus	RefSeq	ILMN_217569	ILMN_217569	TAP1	NM_013683.1	NM_013683.1		21354	7305538	NM_013683.1	Tap1	NP_038711.1	ILMN_1250409	005870093	S	2108	TGCAGCTCATGAAGAGAGGAGGGTGCTACCGGGCCATGGTAGAGGCTCTT	17	+	34328425-34328471:34328442-34328444	17qB1	Mus musculus transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) (Tap1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]	Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ham1; ABC17; PSF1; Abcb2; APT1; Tap-1; RING4; MTP1; Y3; TAP; Ham-1	Ham1; ABC17; PSF1; Abcb2; APT1; Tap-1; RING4; MTP1; Y3; TAP; Ham-1
Mus musculus	RefSeq	ILMN_218010	ILMN_218010	NECAP1	NM_026267.1	NM_026267.1		67602	13385773	NM_026267.1	Necap1	NP_080543.2	ILMN_2854878	001300088	S	2127	CTCCCCTTCCCAGGCAGCTCTCTTCTTGCAGAGCCATGGCAGGACATTTA	6	+	122854294-122854343	6qF2	Mus musculus NECAP endocytosis associated 1 (Necap1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IDA]; A clathrin coat found on a vesicle [goid 30125] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mFLJ00061; FLJ00061; 1200016B17Rik; AI747569	mFLJ00061; FLJ00061; 1200016B17Rik; AI747569
Mus musculus	RefSeq	ILMN_218010	ILMN_218010	NECAP1	NM_026267.1	NM_026267.1		67602	13385773	NM_026267.1	Necap1	NP_080543.2	ILMN_2715304	000240747	S	332	GCATCGGCTTCACGGATCGGGGAGATGCCTTCGACTTTAATGTTTCCCTG	6	+	122847138-122847187	6qF2	Mus musculus NECAP endocytosis associated 1 (Necap1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IDA]; A clathrin coat found on a vesicle [goid 30125] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mFLJ00061; FLJ00061; 1200016B17Rik; AI747569	mFLJ00061; FLJ00061; 1200016B17Rik; AI747569
Mus musculus	RefSeq	ILMN_247777	ILMN_247777	FVT1	NM_027534.1	NM_027534.1		70750	110625779	NM_027534.1	Fvt1	NP_081810.1	ILMN_2832608	005820561	S	867	AGGACTCCAGCAGGTGGTCACCATGGGCCTTTTCCGAACAATTGCCTTGT	1	-	108621561-108621598:108624206-108624217	1qE2.1	Mus musculus follicular lymphoma variant translocation 1 (Fvt1), mRNA. XM_921793 XM_985103				6330410P18Rik	6330410P18Rik
Mus musculus	RefSeq	ILMN_189245	ILMN_254242	GGA3	NM_173048.2	NM_173048.2		260302	116089307	NM_173048.2	Gga3	NP_766636.2	ILMN_1242273	004670112	S	492	CATGGATAGAACGCTGATCCCCTCTCCCCCACCTCGGCCCAAAAACCCCG	11	-	115452602-115452651	11qE2	Mus musculus golgi associated, gamma adaptin ear containing, ARF binding protein 3 (Gga3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISO]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ARF, ADP-ribosylation factor, a small monomeric cytosolic GTPase that, when bound to GTP, binds to the membranes of cells [goid 30306] [evidence ISO]	mKIAA0154; C230037M19Rik	mKIAA0154; C230037M19Rik
Mus musculus	RefSeq	ILMN_189245	ILMN_254242	GGA3	NM_173048.2	NM_173048.2		260302	116089307	NM_173048.2	Gga3	NP_766636.2	ILMN_2695718	001710546	S	2922	GTCCTACTCACTACCTCTTGCTTGGCATGAAATAAACTGCTGTGCTCCCC	11	-	115446268-115446317	11qE2	Mus musculus golgi associated, gamma adaptin ear containing, ARF binding protein 3 (Gga3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISO]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ARF, ADP-ribosylation factor, a small monomeric cytosolic GTPase that, when bound to GTP, binds to the membranes of cells [goid 30306] [evidence ISO]	mKIAA0154; C230037M19Rik	mKIAA0154; C230037M19Rik
Mus musculus	RefSeq	ILMN_258954	ILMN_258954	MYO1C	NM_001080774.1	NM_001080774.1		17913	124494243	NM_001080774.1	Myo1c	NP_001074243.1	ILMN_3060454	004610356	I	141	GGCGCTATGGCGAAGGTGATTCCTGAGCTGACTCTTCGGTGATGACTAAG	11	+	75465792-75465841	11qB5	Mus musculus myosin IC (Myo1c), transcript variant 2, mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; A myosin complex containing a class I myosin heavy chain and associated light chains; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments; myosin I complexes are involved in diverse processes related to membrane traffic and cell movement [goid 45160] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence NAS]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence TAS]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	NMI; myr2; C80397; MMIb; MYO1E; mm1beta	NMI; myr2; C80397; MMIb; MYO1E; mm1beta
Mus musculus	RefSeq	ILMN_212391	ILMN_212391	LCTL	NM_145835.2	NM_145835.2		235435	141802015	NM_145835.2	Lctl	NP_665834.1	ILMN_1235276	004290358	S	1718	AGCCTCGCTATCCCAAGGCTTCTGTGCAGTATTACAAGGAGATCATCACA	9	+	63981028-63981077	9qC	Mus musculus lactase-like (Lctl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	E130104I05Rik; KLPH	E130104I05Rik; KLPH
Mus musculus	RefSeq	ILMN_216155	ILMN_216155	GSS	NM_008180.1	NM_008180.1		14854	6680116	NM_008180.1	Gss	NP_032206.1	ILMN_1227649	003850167	S	414	GCGGCGCAGACGGCTCCAAAGCCCTGAAACAGATCGAGATCAACACTATC	2	-	155404071-155404120	2qH1	Mus musculus glutathione synthetase (Gss), mRNA.		The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus [goid 46686] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione [goid 4363] [evidence IDA]	GS-A/GS-B; AI314904	GS-A/GS-B; AI314904
Mus musculus	RefSeq	ILMN_216155	ILMN_216155	GSS	NM_008180.1	NM_008180.1		14854	6680116	NM_008180.1	Gss	NP_032206.1	ILMN_2667909	005390102	S	1463	ACTCAGGAGGCCTTCTATCCCCTGTACTTGGCACTCCTCTTCTGAGGGGT	2	-	155389263-155389312	2qH1	Mus musculus glutathione synthetase (Gss), mRNA.		The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus [goid 46686] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione [goid 4363] [evidence IDA]	GS-A/GS-B; AI314904	GS-A/GS-B; AI314904
Mus musculus	RefSeq	ILMN_216155	ILMN_216155	GSS	NM_008180.1	NM_008180.1		14854	6680116	NM_008180.1	Gss	NP_032206.1	ILMN_2818895	001340020	S	1414	GGCAGTCCTGGACAACCCCTACCCTGTGTGAAGACGCCATCTGGACTTCA	2	-	155389312-155389331:155389332-155389361	2qH1	Mus musculus glutathione synthetase (Gss), mRNA.		The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus [goid 46686] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione [goid 4363] [evidence IDA]	GS-A/GS-B; AI314904	GS-A/GS-B; AI314904
Mus musculus	Riken	ILMN_201988	ILMN_201988	2310021F11RIK	ri|2310021F11|ZX00039M04|AK009436|1777					AK009436	2310021F11Rik		ILMN_1247771	001980050	S	1359	AGGTCCATGGTAGACTGCTTGCCTACTACACGGGACTGTGGGGTTAATCC										
Mus musculus	MEEBO	ILMN_186876	ILMN_186876	MYO18B	scl074376.1_234				51711421	XM_355634	Myo18b		ILMN_2439259	005360445	S	11	TGCATCCTGAAGATGTTCTTAGACGGAAGAGCCCAGTCAGGAGACTACCT										
Mus musculus	MEEBO	ILMN_186876	ILMN_186876	MYO18B	scl074376.1_234				51711421	XM_355634	Myo18b		ILMN_1239070	000050543	S	3	AAGATGTCCCGATCCCATCCAACCATGAATGCCAAGTCCCTAGGCAGTGG										
Mus musculus	Riken	ILMN_204599	ILMN_204599	2010001M05RIK	ri|2010001M05|ZX00043D09|AK028114|2366					AK028114	2010001M05Rik		ILMN_1223481	002850546	S	2201	CACCTTGAAGCAGGTCTCTAGTTCATCACACGTTCCCACCCAACCCTGCC										
Mus musculus	RefSeq	ILMN_219762	ILMN_312921	LOC100047091	XM_001477366.1	XM_001477366.1		100047091	149240770	XM_001477366.1	LOC100047091	XP_001477416.1	ILMN_2713333	001450477	S	1724	CATTTGTACGATGTGGGGAGGTTGTATTTGAGAGCTGGTAGTGTGTGTGC					PREDICTED: Mus musculus hypothetical protein LOC100047091 (LOC100047091), mRNA.					
Mus musculus	RefSeq	ILMN_191210	ILMN_241836	A930009A15RIK	XM_902233.2	XM_902233.2		77798	94388660	XM_902233.2	A930009A15Rik	XP_907326.1	ILMN_1218755	002360309	S	911	AGATGTTTACATAGAAATGTGACATTTGGCGTTATTTCACATTTGTGCAA	10	+	115019414-115019463	10qD2	PREDICTED: Mus musculus RIKEN cDNA A930009A15 gene (A930009A15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194315	ILMN_251451	UBTF	NM_001044383.1	NM_001044383.1		21429	113205052	NM_001044383.1	Ubtf	NP_001037848.1	ILMN_1255927	007610092	S	2716	TGGGAGAGAGTCTTAAAGAGTTTGGTGAGACCTCCACACCTGCAGCCTGC	11	-	102167554-102167603	11qD	Mus musculus upstream binding transcription factor, RNA polymerase I (Ubtf), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	UBF; A930005G04Rik; UBF1; Tcfubf; NOR-90	UBF; A930005G04Rik; UBF1; Tcfubf; NOR-90
Mus musculus	MEEBO	ILMN_190628	ILMN_190628	SCL000860.1_1	scl000860.1_1	AK042539.1			26335170	AK042539.1	scl000860.1_1		ILMN_2471866	004390400	S	15	TGCAAACGCCATGGTTTCAGGTGCCTGATGCTGCTGGCAGGGTAGAGAGG										
Mus musculus	RefSeq	ILMN_201570	ILMN_201570	PADI2	NM_008812.1	NM_008812.1		18600	6679264	NM_008812.1	Padi2	NP_032838.1	ILMN_3048899	005080639	I	4104	GCCCTTGAGGGCAAAGCCCCAAATCCTGTCTCCTGCTCCAGAGTAGAAAA	4	+	140501311-140501360	4qD3	Mus musculus peptidyl arginine deiminase, type II (Padi2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of peptidyl-arginine to form peptidyl-citrulline [goid 18101] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3 [goid 4668] [evidence IEA]	Pdi; Pdi2; mKIAA0994	Pdi; Pdi2; mKIAA0994
Mus musculus	RefSeq	ILMN_201570	ILMN_201570	PADI2	NM_008812.1	NM_008812.1		18600	6679264	NM_008812.1	Padi2	NP_032838.1	ILMN_1223381	004860048	S	2979	CCAGATACAGGCAAATTTACCCCTCGGCTTCCATTAGAAAGACCCCCAGG	4	+	140495340-140495389	4qD3	Mus musculus peptidyl arginine deiminase, type II (Padi2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of peptidyl-arginine to form peptidyl-citrulline [goid 18101] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3 [goid 4668] [evidence IEA]	Pdi; Pdi2; mKIAA0994	Pdi; Pdi2; mKIAA0994
Mus musculus	RefSeq	ILMN_201570	ILMN_201570	PADI2	NM_008812.1	NM_008812.1		18600	6679264	NM_008812.1	Padi2	NP_032838.1	ILMN_1237983	004890079	S	4599	TCCTGGCGAAGAAGCCAAGATGGAGACTGAGAAGTGTTTGGGGAAGAGCC	4	+	140501806-140501855	4qD3	Mus musculus peptidyl arginine deiminase, type II (Padi2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of peptidyl-arginine to form peptidyl-citrulline [goid 18101] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3 [goid 4668] [evidence IEA]	Pdi; Pdi2; mKIAA0994	Pdi; Pdi2; mKIAA0994
Mus musculus	RefSeq	ILMN_201570	ILMN_201570	PADI2	NM_008812.1	NM_008812.1		18600	6679264	NM_008812.1	Padi2	NP_032838.1	ILMN_3124783	006650079	A	386	TCGCTGGATGTGGACGCAGATCGGGATGGAGAGGTGGAGAAGAACAATCC	4	+	140468598-140468642:140470194-140470198	4qD3	Mus musculus peptidyl arginine deiminase, type II (Padi2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of peptidyl-arginine to form peptidyl-citrulline [goid 18101] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3 [goid 4668] [evidence IEA]	Pdi; Pdi2; mKIAA0994	Pdi; Pdi2; mKIAA0994
Mus musculus	RefSeq	ILMN_223068	ILMN_320130	4930470P17RIK	XR_035478.1	XR_035478.1		67637	149249785	XR_035478.1	4930470P17Rik		ILMN_2758904	002850360	S	1174	CAAGACACAAGGATTCTTCATCCCTAAATCCAGGACGTGGCAAGGAGCTC	2	-	170405089-170405138	2qH3	PREDICTED: Mus musculus RIKEN cDNA 4930470P17 gene (4930470P17Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_212352	ILMN_212352	ANKRD1	NM_013468.3	NM_013468.3		107765	133893293	NM_013468.3	Ankrd1	NP_038496.2	ILMN_2625451	002810450	S	975	CAGCCTCAAGGAGAATGCCTACAAGAACTCTCGCATAGCTACATTCTGAG	19	-	36187195-36187196:36187197-36187244	19qC2	Mus musculus ankyrin repeat domain 1 (cardiac muscle) (Ankrd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	Crap; CARP; Alrp	Crap; CARP; Alrp
Mus musculus	MEEBO	ILMN_221137	ILMN_221137	2610301G19RIK	scl0219158.1_104	XM_358314.1			38076284	XM_358314.1	2610301G19Rik		ILMN_2731463	000770241	S	2956	AGGTGATGGAGCCCATTCAAGGAGCATTTGGTGTTGGGTCAGGGTTGCCA										
Mus musculus	RefSeq	ILMN_208960	ILMN_208960	JAM2	NM_023844.2	NM_023844.2		67374	31543009	NM_023844.2	Jam2	NP_076333.2	ILMN_2790842	003840703	S	2440	AGCTCTGCTTTGATAGGAGGACTGCTATCCTTCTGCAGTGCCAAGCAGAC	16	+	84706900-84706949	16qC3.3	Mus musculus junction adhesion molecule 2 (Jam2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			VE-JAM; 1110002N23Rik; JAM-2; AU016127; 2410167M24Rik; JAM-B; 2410030G21Rik; Jcam2	VE-JAM; 1110002N23Rik; JAM-2; AU016127; 2410167M24Rik; JAM-B; 2410030G21Rik; Jcam2
Mus musculus	RefSeq	ILMN_208960	ILMN_208960	JAM2	NM_023844.2	NM_023844.2		67374	31543009	NM_023844.2	Jam2	NP_076333.2	ILMN_1227559	003400164	S	2796	CTGCACACTAATCTTCTAGTTATTAAGTCTATCCGGGAGTCACTGCCATG	16	+	84707256-84707305	16qC3.3	Mus musculus junction adhesion molecule 2 (Jam2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			VE-JAM; 1110002N23Rik; JAM-2; AU016127; 2410167M24Rik; JAM-B; 2410030G21Rik; Jcam2	VE-JAM; 1110002N23Rik; JAM-2; AU016127; 2410167M24Rik; JAM-B; 2410030G21Rik; Jcam2
Mus musculus	RefSeq	ILMN_208960	ILMN_208960	JAM2	NM_023844.2	NM_023844.2		67374	31543009	NM_023844.2	Jam2	NP_076333.2	ILMN_2790839	007570673	S	2501	ATGCCTCTTCAGGCCCACATGCCTCTTCAGGCCCACATAGCATCACGAGG	16	+	84706961-84707010	16qC3.3	Mus musculus junction adhesion molecule 2 (Jam2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			VE-JAM; 1110002N23Rik; JAM-2; AU016127; 2410167M24Rik; JAM-B; 2410030G21Rik; Jcam2	VE-JAM; 1110002N23Rik; JAM-2; AU016127; 2410167M24Rik; JAM-B; 2410030G21Rik; Jcam2
Mus musculus	MEEBO	ILMN_186787	ILMN_186787	C230004L04	scl26331.1.1_126						C230004L04		ILMN_2438491	001500474	S	12	CGACACTCATTAACTTCACTGATAAAGGTGGAAACGGATGTGGCAACACT										
Mus musculus	RefSeq	ILMN_232953	ILMN_232953	GM944	NM_001033445.1	NM_001033445.1		381126	85701962	NM_001033445.1	Gm944	NP_001028617.1	ILMN_2892592	000650066	S	4775	CTGTGAAGTTTCCATACTGCTCTCTCACACCCAAGACTCAGGGAGAGTCG	18	-	21270309-21270358	18qA2	Mus musculus gene model 944, (NCBI) (Gm944), mRNA.				mKIAA4238; C86169; KIAA4238	mKIAA4238; C86169; KIAA4238
Mus musculus	RefSeq	ILMN_231797	ILMN_231797	IRS2	NM_001081212.1	NM_001081212.1		384783	124487072	NM_001081212.1	Irs2	NP_001074681.1	ILMN_3144164	002100215	A	3874	CCAGGCACTGGAGCTTTGCCCTCTGCCAGCACCTATGCAAGCATCGACTT	8	-	11004507-11004556	8qA1.1	Mus musculus insulin receptor substrate 2 (Irs2), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IGI]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]	Irs-2	Irs-2
Mus musculus	RefSeq	ILMN_214379	ILMN_214379	ZFP711	NM_177747.3	NM_177747.3		245595	125347347	NM_177747.3	Zfp711	NP_808415.2	ILMN_2937282	004570091	S	1217	AGCAGTGGCCATTCTGTAGCTGGAGTGCTTGACCAGAGCCGAATGCAGCG	X	+	109738380-109738429	XqE1	Mus musculus zinc finger protein 711 (Zfp711), mRNA.				A230078I01Rik; 2810409C01Rik	A230078I01Rik; 2810409C01Rik
Mus musculus	RefSeq	ILMN_198391	ILMN_242264	GM962	NM_001033448.2	NM_001033448.2		381201	142349236	NM_001033448.2	Gm962	NP_001028620.1	ILMN_2531520	005360193	S	2908	CGCCTGGAGAAAGCTCAGGTGGATGGTGTGCCTGTAGCCCTAAGGACTGA	19	+	5571077-5571126	19qA	Mus musculus gene model 962, (NCBI) (Gm962), mRNA.					
Mus musculus	RefSeq	ILMN_201306	ILMN_258871	WDR51B	NM_027740.5	NM_027740.5		382406	146141226	NM_027740.5	Wdr51b	NP_082016.1	ILMN_2541823	000020736	S	1132	CTTTCGATTCAACCACAATGACGGATTCCACCTATCGAGCTGTGCCAGGC				10qC3-qD1	Mus musculus WD repeat domain 51B (Wdr51b), mRNA.				4933430F16Rik	4933430F16Rik
Mus musculus	RefSeq	ILMN_201916	ILMN_258871	WDR51B	NM_027740.5	NM_027740.5		382406	146141226	NM_027740.5	Wdr51b	NP_082016.1	ILMN_1240799	006330463	S	1577	CAGAGGGTGAGCAACGAAACCGAAAAGGTTCCAGGCATTCTCAGGGACTG				10qC3-qD1	Mus musculus WD repeat domain 51B (Wdr51b), mRNA.				4933430F16Rik	4933430F16Rik
Mus musculus	RefSeq	ILMN_212551	ILMN_258871	WDR51B	NM_027740.5	NM_027740.5		382406	146141226	NM_027740.5	Wdr51b	NP_082016.1	ILMN_1223184	002680017	S	2351	GGGTCAGGCATTCTAAAAGATCTTGAACACAAGTTAAGAACGTTTCTCTA				10qC3-qD1	Mus musculus WD repeat domain 51B (Wdr51b), mRNA.				4933430F16Rik	4933430F16Rik
Mus musculus	RefSeq	ILMN_216301	ILMN_216301	TIE1	NM_011587.1	NM_011587.1		21846	6755784	NM_011587.1	Tie1	NP_035717.1	ILMN_2928560	005490176	S	3453	TCTGGTCCTTTGGGGTCCTCCTCTGGGAGATAGTGAGCCTTGGAGGCACG	4	-	117970810-117970820:117970900-117970938	4qD2.1	Mus musculus tyrosine kinase receptor 1 (Tie1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISM]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IMP]; The joining of two or more lipid bilayer membranes that surround a cell [goid 45026] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	TIE; D430008P04Rik	TIE; D430008P04Rik
Mus musculus	RefSeq	ILMN_198652	ILMN_238217	LOC677457	XM_001003759.1	XM_001003759.1		677457	94380335	XM_001003759.1	LOC677457	XP_001003759.1	ILMN_1257615	001340142	S	929	AGAATGCACTGCAGGACACTGCTGAGACACCTGAAAACGTGGCAGAGATT				7qB4	PREDICTED: Mus musculus similar to MAS-related GPR, member A4 (LOC677457), mRNA.					
Mus musculus	RefSeq	ILMN_221699	ILMN_221699	IL24	NM_053095.1	NM_053095.1		93672	16716386	NM_053095.1	Il24	NP_444325.1	ILMN_1214841	006180609	S	961	GATGGCACCTTTGGATGCTCCGACTGACCCACAAAGTAGATTTGCATATT	1	-	132778822-132778871	1qE4	Mus musculus interleukin 24 (Il24), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISA]	St16; Mda-7; FISP; Mda7	St16; Mda-7; FISP; Mda7
Mus musculus	RefSeq	ILMN_215883	ILMN_215883	HTR1A	NM_008308.3	NM_008308.3		15550	144227220	NM_008308.3	Htr1a	NP_032334.2	ILMN_2664762	001170609	S	3505	GCTGTATCTTTCCAATGTCTGCACCTGCTGTTTTGAAAACCCGTGCTGCA	13	+	106237347-106237396	13qD1	Mus musculus 5-hydroxytryptamine (serotonin) receptor 1A (Htr1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpcr18	Gpcr18
Mus musculus	RefSeq	ILMN_217850	ILMN_217850	IL9R	NM_008374.1	NM_008374.1		16199	6680438	NM_008374.1	Il9r	NP_032400.1	ILMN_2688364	002070672	S	2737	GGCCAAAACAGGCTGAGCAGTTGGCCACGTTTGTGCAGATTTGGAGCCAT	11	-	32090645-32090694	11qA4	Mus musculus interleukin 9 receptor (Il9r), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	MGC130502	MGC130502
Mus musculus	Riken	ILMN_202364	ILMN_202364	4930487N19RIK	ri|4930487N19|PX00032N08|AK015640|1427					AK015640	4930487N19Rik		ILMN_2549039	004480494	S	1305	CAGGTGGATTTAGTGATTCCCATGCAGCTGTTATCTGTCAGTGTCCATTG										
Mus musculus	MEEBO	ILMN_216403	ILMN_216403	B230220B15RIK	scl00320723.1_158	NM_177246.2			31343158	NM_177246.2	B230220B15Rik		ILMN_1231685	005570010	S	1502	GCGTCGCAAGCATGTCCAAGCACACGTCAAAGTTAAACAACGCACATAGA										
Mus musculus	MEEBO	ILMN_216403	ILMN_216403	B230220B15RIK	scl00320723.1_158	NM_177246.2			31343158	NM_177246.2	B230220B15Rik		ILMN_1234381	000650035	S	1502	CGTCGCAAGCATGTCCAAGCACACGTCAATGTTAAACAACGCACATAGAA										
Mus musculus	RefSeq	ILMN_251069	ILMN_251069	OLFR180	NM_001011662.1	NM_001011662.1		258178	58615694	NM_001011662.1	Olfr180	NP_001011662.1	ILMN_3161210	006660431	S	440	GCACATTCATAACCAGTAACCTGCATTCCTTGATTCATGTAGGGTGTCTC	16	-	58915976-58916025	16qC1.2	Mus musculus olfactory receptor 180 (Olfr180), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR184-9	MOR184-9
Mus musculus	RefSeq	ILMN_220630	ILMN_220630	ENOX2	NM_145951.4	NM_145951.4		209224	146149079	NM_145951.4	Enox2	NP_666063.1	ILMN_1227727	007100424	S	219	TGGTTCCAGAAGGCCTCATTGAGAATGGAGGGGAATCAAGCAAGAAAAGA				XqA4-qA5	Mus musculus ecto-NOX disulfide-thiol exchanger 2 (Enox2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI314192; tNOX; MGC32453; Cova1; APK1	AI314192; tNOX; MGC32453; Cova1; APK1
Mus musculus	RefSeq	ILMN_220630	ILMN_220630	ENOX2	NM_145951.4	NM_145951.4		209224	146149079	NM_145951.4	Enox2	NP_666063.1	ILMN_1233827	004490626	S	2282	GCGTCTCAAGCTACAGGTCCTAAAAAGAAATTGCCTCAAACCTCAAGTGC				XqA4-qA5	Mus musculus ecto-NOX disulfide-thiol exchanger 2 (Enox2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI314192; tNOX; MGC32453; Cova1; APK1	AI314192; tNOX; MGC32453; Cova1; APK1
Mus musculus	RefSeq	ILMN_200354	ILMN_200354	LOC386286	XM_359158.1	XM_359158.1			38081402	XM_359158.1	LOC386286		ILMN_1231424	003370674	S	88	GACCACCCTGAAAATCGTTCCACGGCATGTTCCCAAGGCTTAGTGCTCAT										
Mus musculus	RefSeq	ILMN_214813	ILMN_217254	TMEM88	NM_025915.3	NM_025915.3		67020	141802097	NM_025915.3	Tmem88	NP_080191.2	ILMN_1213334	004590377	S	1580	TTCATTTTCTGCGGGCGAACCCCGTGTGCTGGGTCTGGCCATGGTACCAG				11qB3	Mus musculus transmembrane protein 88 (Tmem88), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2600017H02Rik; RP23-5O23.4	2600017H02Rik; RP23-5O23.4
Mus musculus	RefSeq	ILMN_187235	ILMN_187235	TTC3	NM_009441.1	NM_009441.1		22129	6678452	NM_009441.1	Ttc3	NP_033467.1	ILMN_2841721	000540202	S	7078	AGCTGTTGAGACAGAGAGCTGTGCTTCGTGTCAGAGCCTGTGAACATGCC	16	+	94664065-94664114	16qC4	Mus musculus tetratricopeptide repeat domain 3 (Ttc3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221
Mus musculus	RefSeq	ILMN_187235	ILMN_187235	TTC3	NM_009441.1	NM_009441.1		22129	6678452	NM_009441.1	Ttc3	NP_033467.1	ILMN_2841720	004890022	S	6887	GATGCCGTCACCTTCCACCCGTGTCTGTGTGAGTTGTGGTGTCTTAGTGA	16	+	94663874-94663923	16qC4	Mus musculus tetratricopeptide repeat domain 3 (Ttc3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221
Mus musculus	RefSeq	ILMN_187235	ILMN_187235	TTC3	NM_009441.1	NM_009441.1		22129	6678452	NM_009441.1	Ttc3	NP_033467.1	ILMN_2498478	001090093	S	9	GTCCCTGAAACATGGTGTCCATGCTGTAACAGTGGAGTGCAGTACATGCC	16	+	94605218-94605220:94605221-94605267	16qC4	Mus musculus tetratricopeptide repeat domain 3 (Ttc3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221
Mus musculus	RefSeq	ILMN_200078	ILMN_200078	LOC385718	XM_358922.1	XM_358922.1			38080248	XM_358922.1	LOC385718		ILMN_1238322	004060706	S	1065	AAAAAACCAATACAAGAATGGGAACAACGCCCTAGAAAAAACAAGAAGGT										
Mus musculus	RefSeq	ILMN_194097	ILMN_254142	HIC2	NM_178922.3	NM_178922.3		58180	70887766	NM_178922.3	Hic2	NP_849253.2	ILMN_2677332	003940433	S	4157	GCGACAGAGTATTGTACCCACCTTAGTGTTGTACCAAGCCTTTTCTGTGT	16	+	17261341-17261390	16qA3	Mus musculus hypermethylated in cancer 2 (Hic2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA409108; mKIAA1020; HRG22	AA409108; mKIAA1020; HRG22
Mus musculus	RefSeq	ILMN_214890	ILMN_214890	SFTPD	NM_009160.1	NM_009160.1		20390	6677920	NM_009160.1	Sftpd	NP_033186.1	ILMN_1244169	005270056	S	1123	GATAAGGCTTGTGGAGAGCAGCGCCTTGTTATCTGTGAGTTCTGAGCCAC	14	-	41985619-41985624:41985625-41985668	14qB	Mus musculus surfactant associated protein D (Sftpd), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; Any process that modulates the surface tension of a liquid. Surface tension is the property that makes a liquid behave as if it had an elastic skin on its surface at the interface with a gas or an immiscible liquid [goid 50828] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Sftp4; AI573415; SP-D	Sftp4; AI573415; SP-D
Mus musculus	RefSeq	ILMN_189431	ILMN_225472	SDK1	NM_177879.4	NM_177879.4		330222	141802600	NM_177879.4	Sdk1	NP_808547.2	ILMN_2728889	000380463	S	6839	GAGCGGAGACGCGTGGTTTTTGCAGTTGCTTGTGGCAGTAGCAGATGTGC	5	+	142688924-142688973	5qG2	Mus musculus sidekick homolog 1 (chicken) (Sdk1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6720466O15Rik; 5330440E10	6720466O15Rik; 5330440E10
Mus musculus	RefSeq	ILMN_212600	ILMN_212600	5033414D02RIK	NM_026362.1	NM_026362.1		67759	21312799	NM_026362.1	5033414D02Rik	NP_080638.1	ILMN_2818396	002030523	S	456	GCTTCATCTTCACCTACCAGTATGACCTGGGCTACGGAACTCTCCTACAG	19	-	29416365-29416414	19qC1	Mus musculus RIKEN cDNA 5033414D02 gene (5033414D02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110007H22Rik; AI852040	1110007H22Rik; AI852040
Mus musculus	MEEBO	ILMN_215307	ILMN_215307	SECISBP2	scl44775.16.1_15	XM_127336.2			28525137	XM_127336.2	Secisbp2		ILMN_2657888	001690554	S	2668	GCCTGTGTGTCTGTGTATTGGGTAAGGATGGGAGAGGCAGGAAAAGACTT										
Mus musculus	MEEBO	ILMN_223836	ILMN_223836	PTF1A	scl21240.2.1_45				9055317	NM_018809	Ptf1a		ILMN_1212730	002100040	S	1170	CTGAGACAGCTCACATCGGGTTGGCCGCGTCTTTGTGCATATTGTACGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons [goid 48699] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IDA]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IDA]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form [goid 60042] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_187862	ILMN_228205	LOC434026	XM_911184.2	XM_911184.2		434026	94377613	XM_911184.2	LOC434026	XP_916277.1	ILMN_1233607	005860687	S	252	TCGGGTGTCCAATCTGGCCTCAGGAGTCCCAAACAGGTTCAGTGGCAGTG				6qC1	PREDICTED: Mus musculus similar to Ig kappa chain V-II region 17S29.1 (LOC434026), mRNA.					
Mus musculus	Riken	ILMN_205311	ILMN_205311	A330105M11RIK	ri|A330105M11|PX00064C17|AK039770|3801					AK039770	A330105M11Rik		ILMN_1246956	007330021	S	3517	GGACAAATAACGGTGCCAGGTGTGGAGCTCATATTGTGGAGCAGGATTTG										
Mus musculus	RefSeq	ILMN_235242	ILMN_235242	TMEM28	NM_001081283.1	NM_001081283.1		620592	124486868	NM_001081283.1	Tmem28	NP_001074752.1	ILMN_2946581	004230195	S	572	GGAACTTCACTCTCTCCTTTTGCGACACCTACACAGTCTGGGACTTGCTG	X	+	97016979-97017028	XqC3	Mus musculus transmembrane protein 28 (Tmem28), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-107A12.1	RP23-107A12.1
Mus musculus	MEEBO	ILMN_221846	ILMN_221846	FRAS1	scl27563.74.239_16	NM_175473.2			31044441	NM_175473.2	Fras1		ILMN_1227146	002000674	S	12180	GTACTTCCACGATGTGCCTTTCGAGGCTCACTTTGCTTCCGAGTTGCCCG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214523	ILMN_214523	ATP12A	NM_138652.1	NM_138652.1		192113	20149727	NM_138652.1	Atp12a	NP_619593.1	ILMN_1228582	002760681	S	3856	CCGAGCCCTCGCCAGCAATCATTGTATGTCAGTCATGTTTTGTGTTGTAA	14	+	57007253-57007302	14qC3	Mus musculus ATPase, H+/K+ transporting, nongastric, alpha polypeptide (Atp12a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The regulation of the levels, transport, and metabolism of potassium ions [goid 55075] [evidence IMP]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a inorganic cations with a valency of one from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage [goid 15077] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) + K+(out) = ADP + phosphate + H+(out) + K+(in) [goid 8900] [evidence IEA]	cHKA; HKalpha2; Atp1al1; MGC124416	cHKA; HKalpha2; Atp1al1; MGC124416
Mus musculus	RefSeq	ILMN_237375	ILMN_237375	OTTMUSG00000008594	NM_001081272.1	NM_001081272.1		546840	124486898	NM_001081272.1	OTTMUSG00000008594	NP_001074741.1	ILMN_3071496	000380435	I	492	GCTGTGGCCACCATCCTCGGACATCCACCCCGCACACCAGAGACTCACTC	4	+	106885247-106885286:106887429-106887438	4qC7	Mus musculus predicted gene, OTTMUSG00000008594 (OTTMUSG00000008594), mRNA.					
Mus musculus	RefSeq	ILMN_192424	ILMN_192424	TRAM1	NM_028173.1	NM_028173.1		72265	30794385	NM_028173.1	Tram1	NP_082449.1	ILMN_2781938	004480402	S	2609	CAAGCCTCAGGCCTGTGGTTAAGTTGCCATGCTGCTAGAAAGTCATGCTT	1	-	13550145-13550194	1qA3	Mus musculus translocating chain-associating membrane protein 1 (Tram1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		1810049E02Rik; MGC1174; TRAMP	1810049E02Rik; MGC1174; TRAMP
Mus musculus	MEEBO	ILMN_215677	ILMN_215677	ASL	scl25992.16.1_1	NM_133768.1			19526985	NM_133768.1	Asl		ILMN_1254257	001430139	S	103	TATGGGGTGGCCGGTTTGTGGGTGCTGTCGACCCCATCATGGAGAAGTTC							The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6526] [evidence IEA]; A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IMP]; The pathway by which ammonia is processed and incorporated into a cell. In an energy-rich (glucose-containing), nitrogen-poor environment glutamine synthetase and glutamate synthase form an ammonia assimilatory cycle, in which ammonia is incorporated into L-glutamate to form L-glutamine, which then combines with alpha-ketoglutarate to regenerate L-glutamate. This ATP-dependent cycle is essential for nitrogen-limited growth and for steady-state growth with some sources of nitrogen [goid 19676] [evidence IMP]; The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine [goid 42450] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: N-(L-arginino)succinate = fumarate + L-arginine [goid 4056] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215677	ILMN_215677	ASL	scl25992.16.1_1	NM_133768.1			19526985	NM_133768.1	Asl		ILMN_2670542	001440746	S	109	GTGGCCGGTTTGTGGGTGCTGTCGACCCCATCATGGAGAAGTTCAACTCA							The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6526] [evidence IEA]; A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IMP]; The pathway by which ammonia is processed and incorporated into a cell. In an energy-rich (glucose-containing), nitrogen-poor environment glutamine synthetase and glutamate synthase form an ammonia assimilatory cycle, in which ammonia is incorporated into L-glutamate to form L-glutamine, which then combines with alpha-ketoglutarate to regenerate L-glutamate. This ATP-dependent cycle is essential for nitrogen-limited growth and for steady-state growth with some sources of nitrogen [goid 19676] [evidence IMP]; The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine [goid 42450] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: N-(L-arginino)succinate = fumarate + L-arginine [goid 4056] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215491	ILMN_215491	TTLL6	NM_172799.3	NM_172799.3		237930	146198840	NM_172799.3	Ttll6	NP_766387.1	ILMN_1237954	005860576	S	3256	AGCAGGACAGTTTCAAATTCGCCAGTGGAAGAGAGACCACGCCCTCTCCA				11qD	Mus musculus tubulin tyrosine ligase-like family, member 6 (Ttll6), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	4932418K24Rik; t8130b59	4932418K24Rik; t8130b59
Mus musculus	RefSeq	ILMN_215831	ILMN_215831	SLC6A7	NM_201353.1	NM_201353.1		240332	41235729	NM_201353.1	Slc6a7	NP_958741.1	ILMN_1248672	004220494	S	3005	GGCTGGCAGGCGTCCTGAAGAGCTCCCACCATGGGGATAGGAATGAGAAA	18	-	61155322-61155371	18qE1	Mus musculus solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 (Slc6a7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	MGC67444; MGC61029; PROT; AW455934	MGC67444; MGC61029; PROT; AW455934
Mus musculus	RefSeq	ILMN_198600	ILMN_198600	LOC278062	XM_205168.3	XM_205168.3			38086375	XM_205168.3	LOC278062		ILMN_1222051	005390746	S	393	CTCTCTAAGCTGTCATGGGTGGGTCCTGGGAGAGGATGATGACTCCAGTG										
Mus musculus	RefSeq	ILMN_187276	ILMN_229323	ACVR1	NM_007394.2	NM_007394.2		11477	40254648	NM_007394.2	Acvr1	NP_031420.2	ILMN_2660103	001660397	S	2623	CAAACGCTGTGGGGGGAAATGCATCTTCTTCGGAATTATCCATTACGTGC	2	-	58298950-58298999	2qC1.1	Mus musculus activin A receptor, type 1 (Acvr1), mRNA.	The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence ISO]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Inflammation which comprises a rapid, short-lived, relatively uniform response to acute injury or antigenic challenge and is characterized by accumulations of fluid, plasma proteins, and granulocytic leukocytes. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response [goid 2526] [pmid 12151307] [evidence IEP]	Combining with transforming growth factor beta to initiate a change in cell activity; upon ligand binding, catalyzes the phosphorylation of a type I TGF-beta receptor [goid 5025] [evidence IDA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]; Combining with activin-bound type II activin receptor to initiate a change in cell activity; upon binding, acts as a downstream transducer of activin signals [goid 16361] [evidence IDA]; Interacting selectively with TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types [goid 50431] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [evidence IPI]	ALK2; Acvr; SKR1; Acvrlk2; Tsk7L; Alk8; ActR-I; Alk-2; ActRIA; D330013D15Rik	ALK2; Acvr; SKR1; Acvrlk2; Tsk7L; Alk8; ActR-I; Alk-2; ActRIA; D330013D15Rik
Mus musculus	RefSeq	ILMN_217879	ILMN_219743	API5	NM_007466.2	NM_007466.2		11800	94158993	NM_007466.2	Api5	NP_031492.2	ILMN_2705276	004120563	S	3560	GTGTTCCTTTTGCTTCAGAAATCTGAAAGAAAATCTTCATGCCATGAATC	2	-	94251976-94252025	2qE1	Mus musculus apoptosis inhibitor 5 (Api5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]		AAC-11; AI196452	AAC-11; AI196452
Mus musculus	RefSeq	ILMN_196802	ILMN_216757	FUS	NM_139149.2	NM_139149.2		233908	112734868	NM_139149.2	Fus	NP_631888.1	ILMN_2525855	000610215	S	260	TTATGGACAGACCCAAAACACAGGCTATGGAACTCAGTCAGCTCCCCAGG	7	+	135113366-135113385:135115352-135115381	7qF3	Mus musculus fusion, derived from t(12;16) malignant liposarcoma (human) (Fus), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	D430004D17Rik; Tls; Fus1; D930039C12Rik	D430004D17Rik; Tls; Fus1; D930039C12Rik
Mus musculus	RefSeq	ILMN_222442	ILMN_222442	KIFC5C	XM_137270.7	XM_137270.7		94118	94388677	XM_137270.7	Kifc5c	XP_137270.7	ILMN_2749649	000730524	S	885	CTTGGAGCTGGAGGAATATCTGGGTACCACGGAAAGGTTGGTTCAGGAGC	10	+	117031922-117031971	10qD2	PREDICTED: Mus musculus kinesin family member C5C (Kifc5c), mRNA.	Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence ISS]		Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence ISS]		
Mus musculus	RefSeq	ILMN_219388	ILMN_219388	FLRT1	NM_201411.1	NM_201411.1		396184	41351536	NM_201411.1	Flrt1	NP_958813.1	ILMN_2708133	004050022	S	2527	ACCGCTCCAAAGAGGAGTACGTGGTGCACACCATATTTCCCTCCAATGGC	19	-	7169738-7169787	19qA	Mus musculus fibronectin leucine rich transmembrane protein 3 (Flrt1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	MEEBO	ILMN_188317	ILMN_188317	A730069N07RIK	scl34912.5.1_264				31343368	NM_178735	A730069N07Rik		ILMN_2451642	006370450	S	19	CAGATGGGTCTGGCTTTAGAATTTACATAGGCAGGACTTAAATTGCCCCT										
Mus musculus	RefSeq	ILMN_214897	ILMN_214897	TEAD2	NM_011565.2	NM_011565.2		21677	31560533	NM_011565.2	Tead2	NP_035695.1	ILMN_2653207	001770224	S	1766	GGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACCTTCCTGC	7	+	52488640-52488689	7qB4	Mus musculus TEA domain family member 2 (Tead2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IGI]	ETF; Etdf; TEF-4; TEAD-2; TEF4	ETF; Etdf; TEF-4; TEAD-2; TEF4
Mus musculus	RefSeq	ILMN_200867	ILMN_235929	ACPT	XM_914444.1	XM_914444.1		546967	82905718	XM_914444.1	Acpt	XP_919537.1	ILMN_1220097	007380497	S	902	ACGATGGGAACACCCCACCTTACGCTGCCTGCATGGCCTTTGAATTCCGG				7qB4	PREDICTED: Mus musculus acid phosphatase, testicular (Acpt), mRNA.					
Mus musculus	MEEBO	ILMN_220734	ILMN_220734	3110001E11RIK	scl43541.11_168	XM_127534.4			38075064	XM_127534.4	3110001E11Rik		ILMN_2726019	001260541	S	2408	GATGTACGTTAAAGATAGACCATATTCTCTGGGAACTAATCAAGCAGGGT										
Mus musculus	MEEBO	ILMN_211100	ILMN_211100	BC021442	scl00224598.1_163	NM_145484.1			21703955	NM_145484.1	BC021442		ILMN_2612506	007510328	S	2737	TTGATTCTTTAGTAATCTATCATGATTAATCTCCAGATTTTCCTACTGTT										
Mus musculus	RefSeq	ILMN_197358	ILMN_251948	LOC433546	XM_906947.2	XM_906947.2		433546	94367556	XM_906947.2	LOC433546	XP_912040.1	ILMN_1253681	004220563	S	255	GATCAAGGGTGCCACACTGGGCTTCCAATACAAGATGCGGTCTGTGTACA				2qH1	PREDICTED: Mus musculus similar to 60S ribosomal protein L9 (LOC433546), mRNA.					
Mus musculus	RefSeq	ILMN_191384	ILMN_245012	C030014K22RIK	NM_175461.3	NM_175461.3		226610	63003924	NM_175461.3	C030014K22Rik	NP_780670.2	ILMN_2590605	002230537	S	1838	CTTGGTGACTTCAAGATGACCAAGAGCAGCATTTATATTGCCAGGATCAG	1	+	169018661-169018710	1qH2.3	Mus musculus RIKEN cDNA C030014K22 gene (C030014K22Rik), mRNA.				C030020L09Rik	C030020L09Rik
Mus musculus	RefSeq	ILMN_191384	ILMN_245012	C030014K22RIK	NM_175461.3	NM_175461.3		226610	63003924	NM_175461.3	C030014K22Rik	NP_780670.2	ILMN_2478626	005130039	S	3999	CCCCCTAAATGTATTTCCCCACACCCTTGGACTTGTGTTGTTTTCGGTGT	1	+	169020822-169020871	1qH2.3	Mus musculus RIKEN cDNA C030014K22 gene (C030014K22Rik), mRNA.				C030020L09Rik	C030020L09Rik
Mus musculus	RefSeq	ILMN_222165	ILMN_261744	SLC22A16	NM_027572.1	NM_027572.1		70840	110625793	NM_027572.1	Slc22a16	NP_081848.1	ILMN_2745620	003800468	S	1835	CAGAGCCTCTCCTGATGCTGAGAAGTGGGGTTCAGGCAGAGTCCCTCCTG	10	+	40323530-40323579	10qB1	Mus musculus solute carrier family 22 (organic cation transporter), member 16 (Slc22a16), mRNA. XM_994581	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of organic cations into, out of, within or between cells. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage [goid 15695] [evidence ISO]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence ISO]	Catalysis of the transfer of amines, including polyamines, from one side of the membrane to the other. Amines are organic compounds that are weakly basic in character and contain an amino (-NH2) or substituted amino group [goid 5275] [evidence ISO]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [evidence ISO]; Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [evidence ISO]	OCT6; 4921504E14Rik; FLIPT2; MGC118295; OKB1; CT2	OCT6; 4921504E14Rik; FLIPT2; MGC118295; OKB1; CT2
Mus musculus	RefSeq	ILMN_256991	ILMN_256991	ANKRD13C	NM_001013806.1	NM_001013806.1		433667	67972430	NM_001013806.1	Ankrd13c	NP_001013828.1	ILMN_3163490	000730465	A	2282	ATAGCTGCAATGCATTCCAAGGGAGTGCTCCCTGCAGGGAATGCGGTGCC	3	+	157669429-157669478	3qH4	Mus musculus ankyrin repeat domain 13c (Ankrd13c), mRNA.				AI505652	AI505652
Mus musculus	RefSeq	ILMN_222694	ILMN_222694	RIPK1	NM_009068.3	NM_009068.3		19766	34328466	NM_009068.3	Ripk1	NP_033094.3	ILMN_2753492	001300402	S	4329	GCCACCAGAACACTGAAGGCCTGAGGAGACTAACCCTGTTCCCAGAACTC	13	+	34126873-34126922	13qA3.3	Mus musculus receptor (TNFRSF)-interacting serine-threonine kinase 1 (Ripk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISO]	D330015H01Rik; RIP; Rip1; Rinp	D330015H01Rik; RIP; Rip1; Rinp
Mus musculus	RefSeq	ILMN_220598	ILMN_220598	1700108M19RIK	NM_027699.2	NM_027699.2		71156	141802773	NM_027699.2	1700108M19Rik	NP_081975.1	ILMN_2724220	004060053	S	507	TCGTTAGAACACTCCCTCGATTTAGCTCCGTGTACATTTGTTGCTACCCG	12	-	36935035-36935084	12qA3	Mus musculus RIKEN cDNA 1700108M19 gene (1700108M19Rik), mRNA.				MGC130242; 4933421E18Rik; MGC130241	MGC130242; 4933421E18Rik; MGC130241
Mus musculus	RefSeq	ILMN_211253	ILMN_211253	HNRNPR	NM_028871.1	NM_028871.1		74326	33859723	NM_028871.1	Hnrnpr	NP_083147.1	ILMN_1239896	001300671	S	2626	TGTATTTCCAATTTCTTGTTCATGTAAGATTTCAATAAAACTCAAAAATC	4	+	135896540-135896589	4qD3	Mus musculus heterogeneous nuclear ribonucleoprotein R (Hnrnpr), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2610003J05Rik; hnRNPR	2610003J05Rik; hnRNPR
Mus musculus	RefSeq	ILMN_211253	ILMN_211253	HNRNPR	NM_028871.1	NM_028871.1		74326	33859723	NM_028871.1	Hnrnpr	NP_083147.1	ILMN_2709856	005130164	S	147	CAGGTGAATGGTAATGCGGTACAGTTAAAAGAAGAGGAAGAACCAATGGA	4	+	135870030-135870079	4qD3	Mus musculus heterogeneous nuclear ribonucleoprotein R (Hnrnpr), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2610003J05Rik; hnRNPR	2610003J05Rik; hnRNPR
Mus musculus	RefSeq	ILMN_211253	ILMN_211253	HNRNPR	NM_028871.1	NM_028871.1		74326	33859723	NM_028871.1	Hnrnpr	NP_083147.1	ILMN_1226173	006650204	S	156	GGTAATGCGGTACAGTTAAAAGAAGAGGAAGAACCAATGGATACTTCCAG	4	+	135870039-135870088	4qD3	Mus musculus heterogeneous nuclear ribonucleoprotein R (Hnrnpr), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2610003J05Rik; hnRNPR	2610003J05Rik; hnRNPR
Mus musculus	RefSeq	ILMN_217450	ILMN_217450	OPRL1	NM_011012.2	NM_011012.2		18389	31543372	NM_011012.2	Oprl1	NP_035142.1	ILMN_2807572	004180364	S	2642	CCAGCAACCTTGGATAGAATCTGATCTTACACAGAGACCTTGGTTAGGTG	2	+	181650062-181650111	2qH4	Mus musculus opioid receptor-like 1 (Oprl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an opioid, any narcotic derived from or resembling opium, to initiate a change in cell activity [goid 4985] [evidence IEA];  [goid 15051] [evidence IEA]	MOR-C; LC132; XOR1; morc; Oprl; KOR3; ORL1	MOR-C; LC132; XOR1; morc; Oprl; KOR3; ORL1
Mus musculus	RefSeq	ILMN_211963	ILMN_230325	MYST4	NM_017479.2	NM_017479.2		54169	110556651	NM_017479.2	Myst4	NP_059507.2	ILMN_2678373	004200672	S	6758	GGCGCGGCCTTGTATAAAATAGGAGCCAGCGGGACTCTTGTATCTACCTG	14	+	22491205-22491254	14qA3	Mus musculus MYST histone acetyltransferase monocytic leukemia 4 (Myst4), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IDA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the addition of an acetyl group to a histone, specific for histones H3 and H4 [goid 4406] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	querkopf; qkf; mKIAA0383; Morf; B130044K16Rik; AI507552	querkopf; qkf; mKIAA0383; Morf; B130044K16Rik; AI507552
Mus musculus	RefSeq	ILMN_211963	ILMN_230325	MYST4	NM_017479.2	NM_017479.2		54169	110556651	NM_017479.2	Myst4	NP_059507.2	ILMN_1224783	002690239	S	5474	CCCCCAGTACCCTATGCAGATGCAGATGGGCATGATGGGAAGCCAGCCAT	14	+	22489921-22489970	14qA3	Mus musculus MYST histone acetyltransferase monocytic leukemia 4 (Myst4), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IDA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the addition of an acetyl group to a histone, specific for histones H3 and H4 [goid 4406] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	querkopf; qkf; mKIAA0383; Morf; B130044K16Rik; AI507552	querkopf; qkf; mKIAA0383; Morf; B130044K16Rik; AI507552
Mus musculus	RefSeq	ILMN_199288	ILMN_250483	EG666002	XM_980871.2	XM_980871.2		666002	149268590	XM_980871.2	EG666002	XP_985965.2	ILMN_1254321	006330010	S	2097	CTGTGTTCTGGGATACTTGGCTACCCTGGCCATTGGGAGCTTCACTCTGG	17	-	23428181-23428230	17qA3.3	PREDICTED: Mus musculus predicted gene, EG666002 (EG666002), mRNA.					
Mus musculus	RefSeq	ILMN_216298	ILMN_216298	ELF5	NM_010125.1	NM_010125.1		13711	6753743	NM_010125.1	Elf5	NP_034255.1	ILMN_2938440	006040196	S	2041	GCAATGCAGGCTGAAGACCTCCAGGTTTAGAATTTAACCTCAAAAGTAAC	2	+	103251662-103251711	2qE2	Mus musculus E74-like factor 5 (Elf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	ESE-5	ESE-5
Mus musculus	MEEBO	ILMN_185761	ILMN_185761	1700129I15RIK	scl53820.5.1_5						1700129I15Rik		ILMN_2429783	002360035	S	20	TGAAAAGATCATAATGAGGATCTTTTCCAACAAATAAATGCCAACACTGG										
Mus musculus	RefSeq	ILMN_218213	ILMN_218213	ACPP	NM_207668.2	NM_207668.2		56318	92373432	NM_207668.2	Acpp	NP_997551.1	ILMN_2693019	002570280	S	3938	GACACATATGGTCACACTCATGGTCTTAAATGGCCTACAGCCACGTTTGT	9	-	104191070-104191119	9qF1	Mus musculus acid phosphatase, prostate (Acpp), transcript variant 1, mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence ISS]	A030005E02Rik; Ppal; Lap; PAP; AI324033	A030005E02Rik; Ppal; Lap; PAP; AI324033
Mus musculus	RefSeq	ILMN_223340	ILMN_223340	ACAA1A	NM_130864.3	NM_130864.3		113868	118131053	NM_130864.3	Acaa1a	NP_570934.1	ILMN_2762728	003180022	S	1691	TGGGACACCCTGGTTGCAAAGCCATTTGTACCTTTGAGGGAGGGATGCAG	9	+	119259346-119259395	9qF3	Mus musculus acetyl-Coenzyme A acyltransferase 1A (Acaa1a), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 2 acetyl-CoA = CoA + acetoacetyl-CoA [goid 3985] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA [goid 3988] [evidence IEA]	D9Ertd25e; PTL; Acaa1; MGC7090; Acaa	D9Ertd25e; PTL; Acaa1; MGC7090; Acaa
Mus musculus	RefSeq	ILMN_190469	ILMN_224724	PRDX5	NM_012021.2	NM_012021.2		54683	118129958	NM_012021.2	Prdx5	NP_036151.1	ILMN_1239765	003850433	S	542	CGTCGGCTGAAAAGGTTCTCCATGGTGATAGACAACGGCATAGTGAAGGC	19	-	6981405-6981441:6981556-6981568	19qA	Mus musculus peroxiredoxin 5 (Prdx5), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	AOEB166; PrxV; Pmp20; Prdx6; AOPP	AOEB166; PrxV; Pmp20; Prdx6; AOPP
Mus musculus	RefSeq	ILMN_190469	ILMN_224724	PRDX5	NM_012021.2	NM_012021.2		54683	118129958	NM_012021.2	Prdx5	NP_036151.1	ILMN_2637233	004920100	S	388	CTGTCTGAGCGTTAATGACGTCTTTGTGATTGAAGAGTGGGGTCGAGCCC	19	-	6982048-6982097	19qA	Mus musculus peroxiredoxin 5 (Prdx5), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	AOEB166; PrxV; Pmp20; Prdx6; AOPP	AOEB166; PrxV; Pmp20; Prdx6; AOPP
Mus musculus	Riken	ILMN_202693	ILMN_202693	BTN1A1	ri|D730042M18|PX00091A05|AK021333|1058					AK021333	Btn1a1		ILMN_1231069	005860273	S	577	TACCTCAAAGTGGCTGGTGGGTACAGACGGGATGTGTCGCCTCGTCACTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_219467	ILMN_219467	BC060267	NM_198603.1	NM_198603.1		212516	38348451	NM_198603.1	BC060267	NP_941005.1	ILMN_1254983	002140452	S	2343	GGCCCATGAAAGACTTTTCTTATATGACCCATGCCTATTATGATGCAAAC	6	-	115760953-115761002	6qE3	Mus musculus cDNA sequence BC060267 (BC060267), mRNA.				BB124106; MGC69711	BB124106; MGC69711
Mus musculus	RefSeq	ILMN_199369	ILMN_260231	LOC666466	XR_001876.2	XR_001876.2		666466	149258327	XR_001876.2	LOC666466		ILMN_1222079	000020746	S	561	CCGAGCTAAGTACAGGCAGATGAACCTCCAGAATATTGAACAAGCACTGC	7|NT_166308.1	+	40141-40190		PREDICTED: Mus musculus similar to OBOX2 (LOC666466), misc RNA.					
Mus musculus	RefSeq	ILMN_199369	ILMN_260231	LOC666466	XR_001876.2	XR_001876.2		666466	149258327	XR_001876.2	LOC666466		ILMN_1225299	000650129	S	384	CTAGCCCAATGGCTTCAAGAAAGTTTCGAAAAGAACGAACTGTGTACACC	7|NT_166308.1	+	39517-39566		PREDICTED: Mus musculus similar to OBOX2 (LOC666466), misc RNA.					
Mus musculus	RefSeq	ILMN_201358	ILMN_201358	LOC382531	XM_356553.1	XM_356553.1			38091659	XM_356553.1	LOC382531		ILMN_1227002	005870452	S	353	AGCAGGAAACACCCTTCAAAAACACTGCTTGCTGGCTGGGCCATGCGGCC										
Mus musculus	Riken	ILMN_203381	ILMN_203381	9530019D23RIK	ri|9530019D23|PX00111M18|AK035337|1692					AK035337	9530019D23Rik		ILMN_1259860	006280273	S	1601	AATCCCAGGGTCTGTGAAGATGGGGCAGGAGGGGCAGTAATAAGGACAGC										
Mus musculus	RefSeq	ILMN_232422	ILMN_232422	GPR110	NM_133776.1	NM_133776.1		77596	19527001	NM_133776.1	Gpr110	NP_598537.1	ILMN_2829756	006280482	S	3648	TGTCCTGAATCCTAGTCAGGCAAGACGGTCCACAGTAAAGTAGGTCAGTC	17	+	43461483-43461532	17qB3	Mus musculus G protein-coupled receptor 110 (Gpr110), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	KPG_009; 5031409J19Rik	KPG_009; 5031409J19Rik
Mus musculus	Riken	ILMN_203573	ILMN_203573	A230072B04RIK	ri|A230072B04|PX00129C23|AK038882|1845					AK038882	A230072B04Rik		ILMN_1233725	003370152	S	1651	AGGACTGCCAAGAGTGCCAGGGATGCCACGGCAGGAGGACTGCCAAGAGT										
Mus musculus	MEEBO	ILMN_189369	ILMN_189369	MOGAT1	scl17761.14_501				18426804	NM_026713	Mogat1		ILMN_2460672	000110296	S	12	CTCGTTCAAGCTTGATTTTCCATAGGAGTACCTCTGTACATTTGTCTGCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The chemical reactions and pathways resulting in the formation of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 6651] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol [goid 3846] [evidence IDA]; Catalysis of the reaction: acyl-CoA + 1,2-diacylglycerol = CoA + triacylglycerol [goid 4144] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215892	ILMN_215892	PRKCSH	NM_008925.1	NM_008925.1		19089	6679464	NM_008925.1	Prkcsh	NP_032951.1	ILMN_1233076	004070189	S	1861	TAATGAGCTCGCCTACCTTGGATTCCTAAGGGGAGTTAGTCCCTGCACCC	9	+	21818532-21818581	9qA3	Mus musculus protein kinase C substrate 80K-H (Prkcsh), mRNA.	A heterodimeric complex that catalyzes the trimming of glucose residues from N-linked core glycans on newly synthesized glycoproteins [goid 17177] [evidence IPI]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IPI]	80K-H	80K-H
Mus musculus	RefSeq	ILMN_239135	ILMN_239135	IDS	NM_010498.2	NM_010498.2		15931	84781811	NM_010498.2	Ids	NP_034628.2	ILMN_3114518	007610273	A	4590	CCCATAGGCTAGTTTCTCAGTGCCAAGTCATCAAAAACAGCTCCGTTTTC	X	-	67598420-67598469	XqA7.1	Mus musculus iduronate 2-sulfatase (Ids), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of the 2-sulfate groups of the L-iduronate 2-sulfate units of dermatan sulfate, heparan sulfate and heparin [goid 4423] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISA]	AW214631	AW214631
Mus musculus	MEEBO	ILMN_189924	ILMN_189924	WHSC2	scl26712.11_156				33859651	NM_011914	Whsc2		ILMN_2474886	006450500	S	5	AGGGTGTGAGGGGGGCTATGACCAGCCTTGATGCCACTATTTACCAGGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_215751	ILMN_215751	RIN2	NM_028724.2	NM_028724.2		74030	34996498	NM_028724.2	Rin2	NP_083000.4	ILMN_3159720	005290519	A	4502	CCTGTACAAGGCTTTTGTTGTCCCAGAACCCTCCCTTGGCACATGCTGGG	2	+	145578929-145578978	2qG1	Mus musculus Ras and Rab interactor 2 (Rin2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW821980; RASSF4; 2010003K16Rik; 4632403N06Rik	AW821980; RASSF4; 2010003K16Rik; 4632403N06Rik
Mus musculus	RefSeq	ILMN_215751	ILMN_215751	RIN2	NM_028724.2	NM_028724.2		74030	34996498	NM_028724.2	Rin2	NP_083000.4	ILMN_3080300	004050241	I	216	GCCGGGAAAATGGCCTGGAACCTTCTGAAACCCACAGAACCGGGAAATTG	2	+	145513791-145513806:145514051-145514084	2qG1	Mus musculus Ras and Rab interactor 2 (Rin2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW821980; RASSF4; 2010003K16Rik; 4632403N06Rik	AW821980; RASSF4; 2010003K16Rik; 4632403N06Rik
Mus musculus	Riken	ILMN_203379	ILMN_203379	PPFIBP2	ri|9530024P03|PX00111K14|AK035364|1727					AK035364	Ppfibp2		ILMN_1258426	006420601	S	1382	TGACTTGTGGTGAAATGGAGGAATGGGGGGCAGTTGGGGTCTGGGTTGGC								Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212462	ILMN_212462	MRPL33	NM_025796.2	NM_025796.2		66845	142375920	NM_025796.2	Mrpl33	NP_080072.1	ILMN_2629835	004150463	S	108	GGTTTCTCCTTCAACCACAAGAGAAGCCGACTCCGAGAGAAGCTGAGCCT	5	+	31918791-31918840	5qB1	Mus musculus mitochondrial ribosomal protein L33 (Mrpl33), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	0610009M10Rik	0610009M10Rik
Mus musculus	RefSeq	ILMN_212462	ILMN_212462	MRPL33	NM_025796.2	NM_025796.2		66845	142375920	NM_025796.2	Mrpl33	NP_080072.1	ILMN_1229110	001980192	S	324	CAGCATGGCCTCGGGGGATGTTGGCTAAGGGACAGAGCCGAAAGAGTCCT	5	+	31924896-31924945	5qB1	Mus musculus mitochondrial ribosomal protein L33 (Mrpl33), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	0610009M10Rik	0610009M10Rik
Mus musculus	RefSeq	ILMN_217170	ILMN_253540	CUBN	NM_001081084.2	NM_001081084.2		65969	148222519	NM_001081084.2	Cubn	NP_001074553.1	ILMN_1224851	001470674	S	11049	CACGGACTGAGCTTCTATGGCCTTTACAAGAGAAAGTGTATGACCAATTT				2qA1	Mus musculus cubilin (intrinsic factor-cobalamin receptor) (Cubn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IMP]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 31419] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]	AA408369; D2Wsu88e; AL022750	AA408369; D2Wsu88e; AL022750
Mus musculus	RefSeq	ILMN_199019	ILMN_259380	4732454E20RIK	NM_001081165.1	NM_001081165.1		270711	124487202	NM_001081165.1	4732454E20Rik	NP_001074634.1	ILMN_2533757	001470040	S	911	GGGTCCCTATAGCTTCCTTGGAGACAGGGTGGTTGAGGAAAATGAGGAAG	10	-	33761343-33761392	10qB1	Mus musculus RIKEN cDNA 4732454E20 gene (4732454E20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm643; AI586164	Gm643; AI586164
Mus musculus	RefSeq	ILMN_259380	ILMN_259380	4732454E20RIK	NM_001081165.1	NM_001081165.1		270711	124487202	NM_001081165.1	4732454E20Rik	NP_001074634.1	ILMN_3017166	002600551	I	3531	CCTTCTGAGCCAGTTAATCGTGGCCATGACTTTTTGGTAAAGGAGATGGG	10	-	33758723-33758772	10qB1	Mus musculus RIKEN cDNA 4732454E20 gene (4732454E20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm643; AI586164	Gm643; AI586164
Mus musculus	RefSeq	ILMN_255298	ILMN_255298	CYB561D1	NM_001081320.1	NM_001081320.1		72023	124486768	NM_001081320.1	Cyb561d1	NP_001074789.1	ILMN_3078306	004230026	I	3954	GAGCAAGAAAGTGTCTGAGTTTGTACCCCCGCAATGCCCTGGTCTGTGGC				3qF2.3	Mus musculus cytochrome b-561 domain containing 1 (Cyb561d1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AW457162; 1600010M23Rik; AI605489	AW457162; 1600010M23Rik; AI605489
Mus musculus	RefSeq	ILMN_197543	ILMN_197543	LOC381444	XM_358581.1	XM_358581.1			38076503	XM_358581.1	LOC381444		ILMN_1259940	004610093	S	508	ACCTAGGAATGGGCTATTGAGAGTGTGTCCACCCAGACTCTCCAGCCTCC										
Mus musculus	Riken	ILMN_207312	ILMN_207312	4921519A02RIK	ri|4921519A02|PX00638N04|AK076575|1897					AK076575	4921519A02Rik		ILMN_1252229	006660056	S	1743	AGCTGAATCCCTTAGAGAGCTAAGCAGCCCACCAGCTCCAAATCTGGCCA										
Mus musculus	RefSeq	ILMN_258141	ILMN_258141	SPRR2K	NM_011477.2	NM_011477.2		20765	31981475	NM_011477.2	Sprr2k	NP_035607.1	ILMN_2990390	003170121	S	437	TCCTCTGCTGCTGTCAAGGGACTGTTGGAAATGGTCCTTCCTTTGTGGCC	3	+	92519128-92519177	3qF1	Mus musculus small proline-rich protein 2K (Sprr2k), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence NAS]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217889	ILMN_217889	PZP	NM_007376.4	NM_007376.4		11287	124256485	NM_007376.4	Pzp	NP_031402.3	ILMN_2688905	005700592	S	4605	AGACAGCAAGATAAACGGAAGGGAATTAAAAAACCATAACATTTATATGT	6	-	128433611-128433660	6qF3	Mus musculus pregnancy zone protein (Pzp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]		 [goid 17114] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IDA]	A2m; A1m; AI893533; MAM	A2m; A1m; AI893533; MAM
Mus musculus	RefSeq	ILMN_221803	ILMN_221803	GZMM	NM_008504.2	NM_008504.2		16904	31982834	NM_008504.2	Gzmm	NP_032530.1	ILMN_1229500	000050253	S	1137	CCTGGATCAGGAAGGTCATTGGTCGCTGGTCACCCCAATCTTTGGTCTGA	10	+	79157856-79157905	10qC1	Mus musculus granzyme M (lymphocyte met-ase 1) (Gzmm), mRNA.		The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]	MMET-1; Lmet1	MMET-1; Lmet1
Mus musculus	MEEBO	ILMN_218004	ILMN_218004	BC021919	scl41606.2.1_154	XM_109827.1			20345936	XM_109827.1	BC021919		ILMN_2690382	001170494	S	1342	TGGTTTTTGCTTTCTTGTTTACCTCCATCTGTCTTCCTGACCCTCTCTAG										
Mus musculus	RefSeq	ILMN_196364	ILMN_196364	AI324046	NM_198640.1	NM_198640.1			38348519	NM_198640.1	AI324046		ILMN_2523841	003120113	S	1456	GCACCTAGCCATTCCTCGGGTCTTACAAGACACTGATACCAGCCCTAACC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196364	ILMN_196364	AI324046	NM_198640.1	NM_198640.1			38348519	NM_198640.1	AI324046		ILMN_2743883	004120458	S	954	AGTACACACAGCCTGGACGCAGCCCCGTGAAGCTCAGTACAACAGTACCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196364	ILMN_196364	AI324046	NM_198640.1	NM_198640.1			38348519	NM_198640.1	AI324046		ILMN_2743884	003130280	S	955	GTACACACAGCCTGGACGCAGCCCCGTGAAGCTCAGTACAACAGTACCTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196364	ILMN_196364	AI324046	NM_198640.1	NM_198640.1			38348519	NM_198640.1	AI324046		ILMN_2703329	001770594	S	1372	TTTACCTGCTCCGTGGTGCATGAGGCTCTCCATAACCACCACACACAGAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217272	ILMN_217272	SEPT6	scl0002894.1_595				14714695	BC010489	Sept6		ILMN_2681293	005260762	S	2001	CCCTTCCTATACAAAACACAATTGCTGGAACAGATAGTGTATATTCCCCC						Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209810	ILMN_209810	0610040J01RIK	NM_029554.2	NM_029554.2		76261	31981328	NM_029554.2	0610040J01Rik	NP_083830.2	ILMN_2915716	004920632	S	1564	GCCCGGACATCCCCACTCTTGATCCCAGGGGCCATTCTGTTTGAATGTAT	5	+	64178317-64178366	5qC3.1	Mus musculus RIKEN cDNA 0610040J01 gene (0610040J01Rik), mRNA.				AI662686	AI662686
Mus musculus	RefSeq	ILMN_198129	ILMN_198129	GM317	XM_139904.6	XM_139904.6		207209	94401786	XM_139904.6	Gm317	XP_139904.5	ILMN_1250498	005720228	S	2342	CTCCTGGGGAGTGTACCAGGCTGTGAGGTGGCTTCGTTGGAAGAGATTCC	17	+	24899248-24899274:24899359-24899381	17qA3.3	PREDICTED: Mus musculus gene model 317, (NCBI) (Gm317), mRNA.					
Mus musculus	RefSeq	ILMN_241995	ILMN_241995	EG630579	NM_001039239.2	NM_001039239.2		630579	110815831	NM_001039239.2	EG630579	NP_001034328.2	ILMN_3136397	004640204	A	2265	ACCATGTAAGGATACATACTGGAGAAAAACCCTACAAATGTAATCAATGT	13	+	62274447-62274496	13qB3	Mus musculus predicted gene, EG630579 (EG630579), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC74346	MGC74346
Mus musculus	RefSeq	ILMN_241995	ILMN_241995	EG630579	NM_001039239.2	NM_001039239.2		630579	110815831	NM_001039239.2	EG630579	NP_001034328.2	ILMN_3059174	004540288	I	235	GCTGGAAACCTACAGGAACCTCAATGCTATAGGCTTTAATTGGGAAGCCC	13	+	62270897-62270928:62271114-62271131	13qB3	Mus musculus predicted gene, EG630579 (EG630579), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC74346	MGC74346
Mus musculus	Riken	ILMN_206756	ILMN_206756	D830014B20RIK	ri|D830014B20|PX00199M23|AK085821|1016					AK085821	D830014B20Rik		ILMN_1243986	006620114	S	720	TGCTTGGAGCACCCTGGGTACATTCTAGAAGTCAGCCGACATTGCAGGTC										
Mus musculus	MEEBO	ILMN_223921	ILMN_223921	9930038B18RIK	scl42630.2.1_19				31581573	NM_176929	9930038B18Rik		ILMN_1246480	001990241	S	3114	GATGAACAGGTCCTTTCTCTGTAAGCAAGTGGGTACCTGATGATGAGGGA										
Mus musculus	Riken	ILMN_203710	ILMN_203710	EPHB1	ri|9630045O17|PX00116J01|AK036211|4100					AK036211	Ephb1		ILMN_2559390	006940414	S	2214	CGTCGGGATTTTCTGAGCGAGGCGAGCATCATGGGCCAGTTTGACCATCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions [goid 21545] [evidence IMP]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IDA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IDA]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA];  [goid 8046] [evidence IDA];  [goid 5005] [evidence TAS]		
Mus musculus	RefSeq	ILMN_232377	ILMN_232377	CPXCR1	NM_001033471.1	NM_001033471.1		382239	85701998	NM_001033471.1	Cpxcr1	NP_001028643.1	ILMN_2846457	004280204	S	970	GAGGCCAAGATTCTACATGCCACAGCTCCAAACCCAGAATACTGTCCAGA	X	+	112595101-112595150	XqE1	Mus musculus CPX chromosome region, candidate 1 (Cpxcr1), mRNA.				Gm1143	Gm1143
Mus musculus	RefSeq	ILMN_209018	ILMN_209018	ABCB10	NM_019552.2	NM_019552.2		56199	66932950	NM_019552.2	Abcb10	NP_062425.1	ILMN_3142789	002510458	A	878	GCGCTGCTGCCAACGGCATTCGTGTCTACCTCATGCAGTCTTCAGGTCAG	8	-	126493817-126493822:126494871-126494914	8qE2	Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 10 (Abcb10), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence ISA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	AU016331; Abcb12; C76534; Abc-me	AU016331; Abcb12; C76534; Abc-me
Mus musculus	RefSeq	ILMN_198045	ILMN_198045	LOC277925	XM_204250.2	XM_204250.2			38080894	XM_204250.2	LOC277925		ILMN_1224547	005550692	S	946	GTGAGTGGGTCAATTAATAAAGGCGCTTCTCAGCAGTGTTCATTTTTCCC										
Mus musculus	RefSeq	ILMN_218300	ILMN_218300	1700020L24RIK	NM_025492.1	NM_025492.1		66330	21313523	NM_025492.1	1700020L24Rik	NP_079768.1	ILMN_2895240	001430491	S	629	ACAGAACTGTCCCTTCAAGCCGCCATCCTTAGCGCCTCCTACCGGTGAGA	11	+	83257127-83257176	11qC	Mus musculus RIKEN cDNA 1700020L24 gene (1700020L24Rik), mRNA.				RP23-249K18.3	RP23-249K18.3
Mus musculus	MEEBO	ILMN_217594	ILMN_217594	TCFAP2B	scl021419.7_64	NM_009334.1			6678250	NM_009334.1	Tcfap2b		ILMN_2760450	007550646	S	1351	TCCAAAGCTGTCTCACGCACTTCAGTCTCATCACGCACGGCTTCGGTGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205962	ILMN_205962	C230070I11RIK	ri|C230070I11|PX00176I16|AK048793|2436					AK048793	C230070I11Rik		ILMN_1238607	001240064	S	1826	GCCTATAACTGTGATTCTCAACCTGGAGGTCTTGGCCCCTTTGGGGGTTG										
Mus musculus	MEEBO	ILMN_220625	ILMN_220625	RNF141	scl0067150.2_45	NM_025999.1			13385503	NM_025999.1	Rnf141		ILMN_1227627	001570743	S	528	TGACTGATGAGGAGGAGTGTTGTATCTGCATGGACGGGCGAGCTGACCTC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197794	ILMN_231065	NDUFB6	NM_001033305.2	NM_001033305.2		230075	142363208	NM_001033305.2	Ndufb6	NP_001028477.1	ILMN_1242233	002680092	S	208	CATGGTCTTTAAGGCGTACCGCTCCAGTCTCTTCGCTGTTTCTCATGTGC	4	-	40224732-40224778:40226191-40226193	4qA5	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 (Ndufb6), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		Gm137	Gm137
Mus musculus	Riken	ILMN_205845	ILMN_205845	ADAM22	ri|A730043M04|PX00150G08|AK042962|1621					AK042962	Adam22		ILMN_1252146	006200056	S	1424	TCAGCATGGTTCAGGAAGGTCTCCGGTTTCATGACTTGATTCTCCTTGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220563	ILMN_220563	ANP32E	NM_023210.3	NM_023210.3		66471	142364647	NM_023210.3	Anp32e	NP_075699.2	ILMN_2723788	005080093	S	2702	GGATTGGCTTTGTTTCCTTGTTTCAGTAATTGGAACTCCTGCTGTCAGTC	3	+	95750786-95750835	3qF2.1	Mus musculus acidic (leucine-rich) nuclear phosphoprotein 32 family, member E (Anp32e), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stops, prevents or reduces the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19212] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI326868; AI047746; MGC11640; LANP-L; CPD1; 2810018A15Rik; LANPL; mLANP-L	AI326868; AI047746; MGC11640; LANP-L; CPD1; 2810018A15Rik; LANPL; mLANP-L
Mus musculus	MEEBO	ILMN_193834	ILMN_193834	4732423E21RIK	scl0106967.2_221						4732423E21Rik		ILMN_2500855	002340070	S	11	GGGACTTTCATGTAGTTTGCAATGTTAAAGCTTGTTTTGGAGCATCTGGC										
Mus musculus	RefSeq	ILMN_211785	ILMN_211785	2310007F04RIK	NM_025501.1	NM_025501.1		66344	21539594	NM_025501.1	2310007F04Rik	NP_079777.1	ILMN_2941749	004290446	S	515	CATGTGCCCATCCTTGGTTCTGACTAGAATAAAGATTCTATCCCCACCGC	3	+	93019453-93019501	3qF1	Mus musculus RIKEN cDNA 2310007F04 gene (2310007F04Rik), mRNA.				MGC144697	MGC144697
Mus musculus	RefSeq	ILMN_200009	ILMN_200009	LOC383095	XM_356869.1	XM_356869.1			38079839	XM_356869.1	LOC383095		ILMN_2537275	003890386	S	176	ATGCAACCAACTTGGAAGATAGGGTCCCATCATGGTTCAGTGGCAGTTGG										
Mus musculus	RefSeq	ILMN_210079	ILMN_210079	6330503K22RIK	NM_182995.1	NM_182995.1		101565	33695138	NM_182995.1	6330503K22Rik	NP_892040.1	ILMN_1224182	001300368	S	156	CACCATTGTGTGTCATGGCGAACCAGTGAGCAAGACTGAGAAGGTACCTG	7	+	125857637-125857686	7qF2	Mus musculus RIKEN cDNA 6330503K22 gene (6330503K22Rik), mRNA.				AA415922; AW557948; AI427129	AA415922; AW557948; AI427129
Mus musculus	RefSeq	ILMN_210079	ILMN_210079	6330503K22RIK	NM_182995.1	NM_182995.1		101565	33695138	NM_182995.1	6330503K22Rik	NP_892040.1	ILMN_3006575	003420521	S	4541	AGGTCCAGGTTACAAAGTTCTCCTCATAGGTGGAAAGGTTTACTGCAGTG	7	+	125880065-125880114	7qF2	Mus musculus RIKEN cDNA 6330503K22 gene (6330503K22Rik), mRNA.				AA415922; AW557948; AI427129	AA415922; AW557948; AI427129
Mus musculus	RefSeq	ILMN_210079	ILMN_210079	6330503K22RIK	NM_182995.1	NM_182995.1		101565	33695138	NM_182995.1	6330503K22Rik	NP_892040.1	ILMN_1228426	005080162	S	4636	CAGGACTCCGTGTGTATCAGTGTGGGCTCCTCAGTAAGGAAGAGGAGCTC	7	+	125880160-125880209	7qF2	Mus musculus RIKEN cDNA 6330503K22 gene (6330503K22Rik), mRNA.				AA415922; AW557948; AI427129	AA415922; AW557948; AI427129
Mus musculus	RefSeq	ILMN_193073	ILMN_322633	LOC100044166	XM_001471806.1	XM_001471806.1		100044166	149263988	XM_001471806.1	LOC100044166	XP_001471856.1	ILMN_1216825	002470240	S	443	CCATCACAGGTACAGGTTTTAATATATCACAGCTTAAGAATAGTGACAAC					PREDICTED: Mus musculus hypothetical protein LOC100044166 (LOC100044166), mRNA.					
Mus musculus	MEEBO	ILMN_195482	ILMN_195482	HSPB1	scl12257.1.1_274				7305172	NM_013560	Hspb1		ILMN_2515964	006960064	S	18	CTCAGTCTTATCTGCTTTTTCCAAAACCTACCACCTCTTTCTGCGGGATC						That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]			
Mus musculus	Riken	ILMN_202612	ILMN_202612	LY116	ri|E430025N19|PX00100O02|AK088780|799					AK088780	Ly116		ILMN_2550935	004670037	S	575	ATGTATTCACTCTGCTGGTGGGGTGCCATGGAGGAGGCAAGGGCTCACTG										
Mus musculus	RefSeq	ILMN_187399	ILMN_232458	6230416J20RIK	NM_173400.2	NM_173400.2		230376	46559771	NM_173400.2	6230416J20Rik	NP_775576.2	ILMN_1233478	000670673	S	3510	TGGTCCTGCAGAGTGATGTTGATGGGATAAAATGCATGTGGTTGGTGAAG	4	-	86227324-86227373	4qC4	Mus musculus RIKEN cDNA 6230416J20 gene (6230416J20Rik), mRNA.				mKIAA1574; D4Ertd27e; RP23-95O1.3; 9830144E06	mKIAA1574; D4Ertd27e; RP23-95O1.3; 9830144E06
Mus musculus	RefSeq	ILMN_214397	ILMN_214397	CCDC84	NM_201372.3	NM_201372.3		382073	89886488	NM_201372.3	Ccdc84	NP_958760.2	ILMN_1213911	001230368	S	755	ATCCAAGAGGAGGAGCACAGCTCTGGCAGCCTCCCAATAGGACCCTCCTA	9	-	44218793-44218842	9qA5.2	Mus musculus coiled-coil domain containing 84 (Ccdc84), mRNA.				Gm1114; MGC106805; D630044F24Rik	Gm1114; MGC106805; D630044F24Rik
Mus musculus	MEEBO	ILMN_191016	ILMN_191016	PDE3B	scl8812.1.1_120				39540590	NM_011055	Pde3b		ILMN_1249213	004890411	S	16	GCTAGGGCTCACTTCAAAGATGTCCAGATGAGCATTCGCTGGAGGACAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence IDA]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196621	ILMN_196621	ATP6A1	XM_147267.1	XM_147267.1			20892558	XM_147267.1	Atp6a1		ILMN_2525051	003180240	S	1161	GCGAGCAGGCAGAGTGAAATGTCTCGGAAACCCTGAGAGAGAAGGGAGTG										
Mus musculus	RefSeq	ILMN_250342	ILMN_250342	GCDH	NM_001044744.1	NM_001044744.1		270076	113680426	NM_001044744.1	Gcdh	NP_001038209.1	ILMN_3136542	004540273	A	1762	GGGTGAGACAAAGGGGAGTAACACAGGAGCCACTGAGATGGAGCAGACCT	8	-	87410594-87410643	8qC3	Mus musculus glutaryl-Coenzyme A dehydrogenase (Gcdh), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: glutaryl-CoA + acceptor = crotonoyl-CoA + CO2 + reduced acceptor [goid 4361] [evidence IEA]	AI266902; D17825; 9030411L18	AI266902; D17825; 9030411L18
Mus musculus	RefSeq	ILMN_219595	ILMN_219595	TMEM38B	NM_028053.1	NM_028053.1		52076	21312531	NM_028053.1	Tmem38b	NP_082329.1	ILMN_2795792	002190066	S	981	CCGTGGTTCTGTGAATGATGTGAGAGAGCGCTTATGTGTAAGGGTGGAGG	4	+	53873027-53873076	4qB2	Mus musculus transmembrane protein 38B (Tmem38b), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IEA]	AV051057; 1600017F22Rik; AA437809; D4Ertd89e; TRIC-B; mg33b	AV051057; 1600017F22Rik; AA437809; D4Ertd89e; TRIC-B; mg33b
Mus musculus	RefSeq	ILMN_219595	ILMN_219595	TMEM38B	NM_028053.1	NM_028053.1		52076	21312531	NM_028053.1	Tmem38b	NP_082329.1	ILMN_2795791	004540626	S	1064	CCGCTCGCTCTGCTGGTCGTAGCTCTTGGGGTCACGAGTGTATCATGTGA	4	+	53873110-53873159	4qB2	Mus musculus transmembrane protein 38B (Tmem38b), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IEA]	AV051057; 1600017F22Rik; AA437809; D4Ertd89e; TRIC-B; mg33b	AV051057; 1600017F22Rik; AA437809; D4Ertd89e; TRIC-B; mg33b
Mus musculus	Riken	ILMN_203550	ILMN_203550	9330158N06RIK	ri|9330158N06|PX00105N08|AK034130|3185					AK034130	9330158N06Rik		ILMN_2558167	005700767	S	933	GCTGCTGTCTGCTACTAAAGAGCCTCAGAACGGAAGAAATTTGGGTTGAC										
Mus musculus	RefSeq	ILMN_218197	ILMN_246812	CPN2	NM_027904.3	NM_027904.3		71756	147904568	NM_027904.3	Cpn2	NP_082180.2	ILMN_1232299	003990497	S	4114	GGGATGCTAAGTAGTTTAACAGCACTTACACAGGTGGATTAAGAGCCCCG				16qB2	Mus musculus carboxypeptidase N, polypeptide 2 (Cpn2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1300018K11Rik	1300018K11Rik
Mus musculus	RefSeq	ILMN_246812	ILMN_246812	CPN2	NM_027904.3	NM_027904.3		71756	147904568	NM_027904.3	Cpn2	NP_082180.2	ILMN_3162120	006560482	S	2098	CATGACCTACAGGTGGAGAACCACTGGCCTAGAGATTATACGACACCCCC				16qB2	Mus musculus carboxypeptidase N, polypeptide 2 (Cpn2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1300018K11Rik	1300018K11Rik
Mus musculus	MEEBO	ILMN_194344	ILMN_194344	NPN2	scl1023.1.1_18						Npn2		ILMN_2505584	005690538	S	11	CAGAACCATATTAAACCTGAACGGAGCAACAGCATCAGCTTCACAGCTTG										
Mus musculus	RefSeq	ILMN_220516	ILMN_220516	HCFC1R1	NM_181821.1	NM_181821.1		353502	32451499	NM_181821.1	Hcfc1r1	NP_861542.1	ILMN_2723083	001030768	S	1033	AGCCAGGTCCTGGCAGGCTGAGCTCCAGGCATTGAGAATGTGTGAGTCAC	17	+	23812281-23812330	17qA3.3	Mus musculus host cell factor C1 regulator 1 (XPO1-dependent) (Hcfc1r1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			HPIP	HPIP
Mus musculus	RefSeq	ILMN_199314	ILMN_199314	LOC331336	XM_285594.2	XM_285594.2			38094367	XM_285594.2	LOC331336		ILMN_2534807	003060369	S	892	CTGCGTCCATTTTCTCAGATCCCAAATGAATCAGGTCCTAGGGTGCCTGA										
Mus musculus	MEEBO	ILMN_220555	ILMN_220555	9130430E04	scl0328222.1_224	NM_183203.1			34147271	NM_183203.1	9130430E04		ILMN_2723669	006840722	S	1071	CACCTGAATGAGTCTAGGAAAGAAACTTAACTCAGTTACAAAATGCTGGA										
Mus musculus	RefSeq	ILMN_241514	ILMN_241514	ZFP498	NM_001081431.1	NM_001081431.1		666311	124487458	NM_001081431.1	Zfp498	NP_001074900.1	ILMN_2960521	003610048	S	569	GCCTAGGCCCAAGCACCACAGAACAGCTGAGCCAGGGCCCTGGAGATGGG	5	+	146047307-146047356	5qG2	Mus musculus zinc finger protein 498 (Zfp498), mRNA.				EG666311	EG666311
Mus musculus	RefSeq	ILMN_198067	ILMN_241514	ZFP498	NM_001081431.1	NM_001081431.1		666311	124487458	NM_001081431.1	Zfp498	NP_001074900.1	ILMN_1219698	000240427	S	1445	AGAGTTTCAGCCGGAACGCCAACCTGGCAGTGCACCGGCGTGCCCATACT	5	+	146051787-146051836	5qG2	Mus musculus zinc finger protein 498 (Zfp498), mRNA.				EG666311	EG666311
Mus musculus	RefSeq	ILMN_200481	ILMN_200481	LOC381734	XM_355716.1	XM_355716.1			38082602	XM_355716.1	LOC381734		ILMN_1236156	006650047	S	351	AAGCCCGACATCACTTACCAGGTGAGCTTTGGGGCAGCTTCTCCTTTCTG										
Mus musculus	RefSeq	ILMN_212415	ILMN_212415	CCRK	NM_053180.2	NM_053180.2		105278	26892296	NM_053180.2	Ccrk	NP_444410.1	ILMN_2627072	005690445	S	1503	CCTGGGTGTTTCTGTCTAATTGCACCTTGTCTGTTGCTGTTAGGGAAAGG	13	+	64540705-64540754	13qB3	Mus musculus cell cycle related kinase (Ccrk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	AW558027; MGC38901; p42; PNQLARE; CDCH; 4932702G04Rik; AU019450	AW558027; MGC38901; p42; PNQLARE; CDCH; 4932702G04Rik; AU019450
Mus musculus	RefSeq	ILMN_212415	ILMN_212415	CCRK	NM_053180.2	NM_053180.2		105278	26892296	NM_053180.2	Ccrk	NP_444410.1	ILMN_1238557	005050437	S	1757	GAGGCTGCCTTGCAGATGCGGAAGCAGACATTCCTGGAATCCACTCAGTA	13	+	64540959-64541008	13qB3	Mus musculus cell cycle related kinase (Ccrk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	AW558027; MGC38901; p42; PNQLARE; CDCH; 4932702G04Rik; AU019450	AW558027; MGC38901; p42; PNQLARE; CDCH; 4932702G04Rik; AU019450
Mus musculus	RefSeq	ILMN_212415	ILMN_212415	CCRK	NM_053180.2	NM_053180.2		105278	26892296	NM_053180.2	Ccrk	NP_444410.1	ILMN_1238571	003420474	S	626	GGAGAGCTGTTGAATGGGTCCCCCCTGTTCCCGGGCGAAAACGACATTGA	13	+	64538716-64538765	13qB3	Mus musculus cell cycle related kinase (Ccrk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	AW558027; MGC38901; p42; PNQLARE; CDCH; 4932702G04Rik; AU019450	AW558027; MGC38901; p42; PNQLARE; CDCH; 4932702G04Rik; AU019450
Mus musculus	RefSeq	ILMN_212415	ILMN_212415	CCRK	NM_053180.2	NM_053180.2		105278	26892296	NM_053180.2	Ccrk	NP_444410.1	ILMN_2942930	004010181	S	1641	TCACGGGACTTGAGTGCTCATTTGGGAGCGAGAGTCCAGAAGCTGAGGCC	13	+	64540843-64540892	13qB3	Mus musculus cell cycle related kinase (Ccrk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	AW558027; MGC38901; p42; PNQLARE; CDCH; 4932702G04Rik; AU019450	AW558027; MGC38901; p42; PNQLARE; CDCH; 4932702G04Rik; AU019450
Mus musculus	RefSeq	ILMN_210040	ILMN_210040	1810034K20RIK	NM_023397.3	NM_023397.3		67881	40254380	NM_023397.3	1810034K20Rik	NP_075886.1	ILMN_1244756	007560010	S	1549	CATGGGCTTGAGGGGACTGCTTTCCAGGTGGCTGTATCCAGTCGTTTCTA	14	-	56276756-56276805	14qC3	Mus musculus RIKEN cDNA 1810034K20 gene (1810034K20Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	Mdp1; AI035604	Mdp1; AI035604
Mus musculus	MEEBO	ILMN_188462	ILMN_188462	PEX11A	scl31146.3_484				6755033	NM_011068	Pex11a		ILMN_2452883	002490022	S	3	CTGGCCAGCAGGCGGGTCATGTCTACTAAGTGGAAATGAGAACTATGCAC						A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments [goid 16559] [evidence IEA]			
Mus musculus	RefSeq	ILMN_211740	ILMN_211740	MEOX1	NM_010791.3	NM_010791.3		17285	31981618	NM_010791.3	Meox1	NP_034921.1	ILMN_1213886	000610678	S	1877	TGGAAGAGACCCCTGTGTGCCTCAGTATTAGATGGTGGATCTCCCAGATC	11	-	101739105-101739154	11qD	Mus musculus mesenchyme homeobox 1 (Meox1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which individual somites establish identity during embryogenesis [goid 1757] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Mox1; D330041M02Rik; AI385561; Mox-1	Mox1; D330041M02Rik; AI385561; Mox-1
Mus musculus	RefSeq	ILMN_192907	ILMN_253824	SCG2	NM_009129.2	NM_009129.2		20254	71361680	NM_009129.2	Scg2	NP_033155.1	ILMN_1237378	002630048	S	1686	GTTAAGTACCCTGAGCTCCTGAATACCAACCAGCTGAAGAGAGTGCCCAG	1	-	79431993-79432042	1qC4	Mus musculus secretogranin II (Scg2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence ISS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	SgII; Chgc	SgII; Chgc
Mus musculus	RefSeq	ILMN_192907	ILMN_253824	SCG2	NM_009129.2	NM_009129.2		20254	71361680	NM_009129.2	Scg2	NP_033155.1	ILMN_2492442	005360132	S	2420	GTTTTACTTATAAGGCCTTTTCTATTGTGTGTTTTATTGTTGATTAATAA	1	-	79431259-79431308	1qC4	Mus musculus secretogranin II (Scg2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence ISS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	SgII; Chgc	SgII; Chgc
Mus musculus	RefSeq	ILMN_190822	ILMN_190822	LAT2	NM_022964.3	NM_022964.3		56743	71061471	NM_022964.3	Lat2	NP_075253.2	ILMN_2473562	004830326	S	1301	GTGTACTAACTGTAGCAGAGGAATGGGGTGTGGGGTAACCTGGGATCGCT	5	-	135079631-135079679:135080031-135080031	5qG2	Mus musculus linker for activation of T cells family, member 2 (Lat2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell [goid 43303] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence ISS]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence ISS]		Wbscr5; Wbscr15; NTAL; WSCR5; AW125574; LAB	Wbscr5; Wbscr15; NTAL; WSCR5; AW125574; LAB
Mus musculus	RefSeq	ILMN_190822	ILMN_190822	LAT2	NM_022964.3	NM_022964.3		56743	71061471	NM_022964.3	Lat2	NP_075253.2	ILMN_3143483	006370553	A	1391	TCCTGCGGGGACCTTGTGCGTCGGTGATAGGGAAATAAAACTGCCCCCTC	5	-	135079331-135079369:135079378-135079388	5qG2	Mus musculus linker for activation of T cells family, member 2 (Lat2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell [goid 43303] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence ISS]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence ISS]		Wbscr5; Wbscr15; NTAL; WSCR5; AW125574; LAB	Wbscr5; Wbscr15; NTAL; WSCR5; AW125574; LAB
Mus musculus	RefSeq	ILMN_216086	ILMN_216086	DHX40	NM_026191.2	NM_026191.2		67487	144926008	NM_026191.2	Dhx40	NP_080467.3	ILMN_1248825	004670678	S	2559	CCTAGCCTGTGAGCCGAAAGCAAATCAGAATTTATAAATCACATCTCATC	11	-	86583466-86583515	11qC	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 40 (Dhx40), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	DDX40; PAD; ARG147; 2410016C14Rik	DDX40; PAD; ARG147; 2410016C14Rik
Mus musculus	MEEBO	ILMN_184970	ILMN_184970	DSG2	scl52210.15_411				22779878	NM_007883	Dsg2		ILMN_1221153	004220554	S	1	GGGCAGAGGTCACCTTATTCCTATGATCTGGAATTGTTTACTTTCTACAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210062	ILMN_210062	PHF19	NM_028716.1	NM_028716.1		74016	21311997	NM_028716.1	Phf19	NP_082992.1	ILMN_2601840	004730131	S	3355	GGCTTGTGGGAACTGGGGTCAAATTTGTGGCTTCCTGTTGGCTTCAGTGA	2	-	34716102-34716151	2qB	Mus musculus PHD finger protein 19 (Phf19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	3110009G19Rik; 3321402G02Rik	3110009G19Rik; 3321402G02Rik
Mus musculus	MEEBO	ILMN_213998	ILMN_213998	6330416L11RIK	scl070713.5_4	NM_027518.1			30794407	NM_027518.1	6330416L11Rik		ILMN_2643128	004590445	S	2937	CTTTATAATAGACATTTGAATCAGAATTTATTTCCCAGTTCATAGATATC										
Mus musculus	RefSeq	ILMN_223558	ILMN_223558	ASB2	NM_023049.1	NM_023049.1		65256	23956121	NM_023049.1	Asb2	NP_075536.1	ILMN_2765759	002850398	S	2622	CAGGCTGCGAGGGAGACGCCCAGCCCAAGTATTTTATTTCACTGAGCACA	12	-	104559370-104559419	12qE	Mus musculus ankyrin repeat and SOCS box-containing 2 (Asb2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		1110008E15Rik	1110008E15Rik
Mus musculus	RefSeq	ILMN_219688	ILMN_219688	A430060F13RIK	NM_183153.2	NM_183153.2		217122	124301229	NM_183153.2	A430060F13Rik	NP_898976.2	ILMN_1228817	002750608	S	342	GCACTTCTGTCCCAAGTGCAGAGAACTGCAGCATGAATTCAGGACAGTGG				11qD	Mus musculus RIKEN cDNA A430060F13 gene (A430060F13Rik), mRNA.				C86086	C86086
Mus musculus	MEEBO	ILMN_212497	ILMN_212497	MYH7	scl00140781.1_330	NM_080728.1			18859640	NM_080728.1	Myh7		ILMN_1213799	001070128	S	2488	GCATCATCACCAGAATCCAGGCCCAGTCCCGAGGTGTGCTCTCCAGAATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218643	ILMN_218643	NFU1	NM_020045.2	NM_020045.2		56748	118130523	NM_020045.2	Nfu1	NP_064429.1	ILMN_2698494	001850047	S	663	CGGGATTCAGAACATGCTGCAGTTTTATATTCCAGAAGTGGAAGGTGTGG	6	+	86975600-86975649	6qD1	Mus musculus NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) (Nfu1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]	The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hirip5; CGI-33; 0610006G17Rik	Hirip5; CGI-33; 0610006G17Rik
Mus musculus	RefSeq	ILMN_224807	ILMN_224807	SCNM1	NM_027013.1	NM_027013.1		69269	58037154	NM_027013.1	Scnm1	NP_081289.1	ILMN_2787580	000160747	S	731	ATGTTGAGTTTGACTCTGATGAGGAAGAGCCCCCCGATCTCCCCTTGGAC	3	-	94933708-94933757	3qF2.1	Mus musculus sodium channel modifier 1 (Scnm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	3110001I17Rik	3110001I17Rik
Mus musculus	RefSeq	ILMN_210461	ILMN_224807	SCNM1	NM_027013.1	NM_027013.1		69269	58037154	NM_027013.1	Scnm1	NP_081289.1	ILMN_1227006	007610689	S	569	AGGAACCTGAGCCTAGGGAGAGATCAGATGCCAAAGAGTCAGCAGCTCTC	3	-	94934150-94934199	3qF2.1	Mus musculus sodium channel modifier 1 (Scnm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	3110001I17Rik	3110001I17Rik
Mus musculus	RefSeq	ILMN_208665	ILMN_243167	NEK1	XM_973899.1	XM_973899.1		18004	94385035	XM_973899.1	Nek1	XP_978993.1	ILMN_1248432	000020307	S	4621	CGCATACATGTGCCTCCGTGGTCACCTGTGTTAAAAAGGAGAGAGGGCCC				8qB3.1	PREDICTED: Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 1, transcript variant 4 (Nek1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISA]		
Mus musculus	MEEBO	ILMN_221822	ILMN_221822	HOXD12	scl015432.1_95	NM_008274.1			6680258	NM_008274.1	Hoxd12		ILMN_2740906	006400152	S	534	GTGGCCTCTTGCCTGCGATCTTCACTGCCCGACGGTAAACAGTGCCCATG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_215255	ILMN_315052	LOC100041500	XM_001478166.1	XM_001478166.1		100041500	149260997	XM_001478166.1	LOC100041500	XP_001478216.1	ILMN_1233901	007050215	S	47	AAGCATCTTGGACCTCTCCAAGTACATCGATAAGACCATTCGGGTGAAGT	10	+	77856094-77856143	10qC1	PREDICTED: Mus musculus similar to LSM7 homolog, U6 small nuclear RNA associated (LOC100041500), mRNA.					
Mus musculus	RefSeq	ILMN_259751	ILMN_259751	TUG1	NR_002322.1	NR_002322.1		544752	68303550	NR_002322.1	Tug1		ILMN_3098616	004250255	A	1155	CATGATGTGGCCTTTACCTCCACTCCTGTCCTACTCTGCCCAGATTCAGC	11	-	3545299-3545348	11qA1	Mus musculus taurine upregulated gene 1 (Tug1), non-coding RNA.		Development of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light [goid 42461] [evidence IMP]		AI316828	AI316828
Mus musculus	RefSeq	ILMN_210588	ILMN_262023	INPP5K	NM_008916.2	NM_008916.2		19062	50263040	NM_008916.2	Inpp5k	NP_032942.1	ILMN_1248389	004850133	S	2562	CCCCCAGGCTTCTAGTGAGCTGTGGCTGTCTGTTCTCTGTGTGTTGTCAT	11	+	75456415-75456464	11qB5	Mus musculus inositol polyphosphate 5-phosphatase K (Inpp5k), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISA]		Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence ISA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [evidence IEA]	C62	C62
Mus musculus	RefSeq	ILMN_262023	ILMN_262023	INPP5K	NM_008916.2	NM_008916.2		19062	50263040	NM_008916.2	Inpp5k	NP_032942.1	ILMN_2933431	005360433	S	2336	TTGGAGGACCTAGCGGCAAGAAGAAGCCTCAGCACTCTCTGGGAGCCATG	11	+	75456044-75456045:75456191-75456238	11qB5	Mus musculus inositol polyphosphate 5-phosphatase K (Inpp5k), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISA]		Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence ISA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [evidence IEA]	C62	C62
Mus musculus	RefSeq	ILMN_214801	ILMN_209942	MIA3	NM_177389.3	NM_177389.3		338366	124001581	NM_177389.3	Mia3	NP_796363.2	ILMN_2692545	005290450	S	6029	CTTAAGCTAGAATATCCTTCAAACTTTGAAATGTGCAATAAAGAATACCT	1|NT_165754.2	-	300183-300232		Mus musculus melanoma inhibitory activity 3 (Mia3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm1525; KIAA0268; 9130229H14Rik; A930039G15Rik; Tango; B230399H06Rik	Gm1525; KIAA0268; 9130229H14Rik; A930039G15Rik; Tango; B230399H06Rik
Mus musculus	RefSeq	ILMN_209942	ILMN_209942	MIA3	NM_177389.3	NM_177389.3		338366	124001581	NM_177389.3	Mia3	NP_796363.2	ILMN_1226269	002030703	S	3061	GTCAGGTACCAATACTCTGGAGTGGAGACTGCCCCATTAGTCACACCTCC	1|NT_165754.2	-	327338-327387		Mus musculus melanoma inhibitory activity 3 (Mia3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm1525; KIAA0268; 9130229H14Rik; A930039G15Rik; Tango; B230399H06Rik	Gm1525; KIAA0268; 9130229H14Rik; A930039G15Rik; Tango; B230399H06Rik
Mus musculus	RefSeq	ILMN_201493	ILMN_209942	MIA3	NM_177389.3	NM_177389.3		338366	124001581	NM_177389.3	Mia3	NP_796363.2	ILMN_1258474	005220519	S	3976	CGTCTTCAGTTAGAGTCTGAGAGGGAGCAGAACGTCAAGAACCAGGACCT	1|NT_165754.2	-	309365-309377:309802-309838		Mus musculus melanoma inhibitory activity 3 (Mia3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm1525; KIAA0268; 9130229H14Rik; A930039G15Rik; Tango; B230399H06Rik	Gm1525; KIAA0268; 9130229H14Rik; A930039G15Rik; Tango; B230399H06Rik
Mus musculus	RefSeq	ILMN_214801	ILMN_209942	MIA3	NM_177389.3	NM_177389.3		338366	124001581	NM_177389.3	Mia3	NP_796363.2	ILMN_2652104	003360414	S	5318	TGGTGAACAGCAGCTCCAGGAGCTCTTCTCCCGCTAAGGCCGTGGATGAG	1|NT_165754.2	-	300894-300943		Mus musculus melanoma inhibitory activity 3 (Mia3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm1525; KIAA0268; 9130229H14Rik; A930039G15Rik; Tango; B230399H06Rik	Gm1525; KIAA0268; 9130229H14Rik; A930039G15Rik; Tango; B230399H06Rik
Mus musculus	RefSeq	ILMN_209942	ILMN_209942	MIA3	NM_177389.3	NM_177389.3		338366	124001581	NM_177389.3	Mia3	NP_796363.2	ILMN_2600646	001710386	S	687	CGGTCCTGCGGCTAACGCTCAGGGAGTGCAGTCTTCGTTGGACACTTTTG	1|NT_165754.2	-	332017-332066		Mus musculus melanoma inhibitory activity 3 (Mia3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm1525; KIAA0268; 9130229H14Rik; A930039G15Rik; Tango; B230399H06Rik	Gm1525; KIAA0268; 9130229H14Rik; A930039G15Rik; Tango; B230399H06Rik
Mus musculus	MEEBO	ILMN_221903	ILMN_221903	E330005K07RIK	scl0320623.1_130	NM_177211.1			28893244	NM_177211.1	E330005K07Rik		ILMN_2741861	003450242	S	2026	CTCCACCAGTGCTGTGTTATTTCCTGTGCCCAAAGGCCAGTGTGTTGTCA										
Mus musculus	Riken	ILMN_202142	ILMN_202142	2900060M06RIK	ri|2900060M06|ZX00069J09|AK013737|507					AK013737	2900060M06Rik		ILMN_1223254	006370519	S	406	CATCATAGAGGCGTCTTTCCTATTGCATACGAGGGCTACAGCAGAGGAAT										
Mus musculus	RefSeq	ILMN_209768	ILMN_209768	NTRK3	NM_182809.1	NM_182809.1		18213	33413428	NM_182809.1	Ntrk3	NP_877961.1	ILMN_2599036	001450356	S	1843	GATCATCTAGTCCCATCAACTCACTATATATATGAGGAACCTGAGGTCCA	7	-	85449197-85449246	7qD3	Mus musculus neurotrophic tyrosine kinase, receptor, type 3 (Ntrk3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IMP]; Any process that activates, maintains or increases the rate of axon extension involved in regeneration [goid 48691] [evidence IGI]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	TrkC; AW125844	TrkC; AW125844
Mus musculus	RefSeq	ILMN_209768	ILMN_209768	NTRK3	NM_182809.1	NM_182809.1		18213	33413428	NM_182809.1	Ntrk3	NP_877961.1	ILMN_2632337	004670181	S	1988	GCATCTATGTTGAGGATGTCAATGTTTATTTCAGCAAAGGACGTCATGGC				7qD3	Mus musculus neurotrophic tyrosine kinase, receptor, type 3 (Ntrk3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IMP]; Any process that activates, maintains or increases the rate of axon extension involved in regeneration [goid 48691] [evidence IGI]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	TrkC; AW125844	TrkC; AW125844
Mus musculus	RefSeq	ILMN_200068	ILMN_200068	LOC385679	XM_358909.1	XM_358909.1			38080204	XM_358909.1	LOC385679		ILMN_2537477	002360338	S	308	GGCTGTTTATGGGATGGATCCCTAGGTGGGGCAGTCTCAGGATGGTCCTT										
Mus musculus	RefSeq	ILMN_218578	ILMN_218578	PDE4B	NM_019840.2	NM_019840.2		18578	112181197	NM_019840.2	Pde4b	NP_062814.2	ILMN_2697552	001400360	S	2395	GAAGAGACTGACATAGACATTGCAACAGAAGACAAGTCTCCGATCGACAC	4	+	102277891-102277940	4qC6	Mus musculus phosphodiesterase 4B, cAMP specific (Pde4b), mRNA.		A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]	Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence ISS]	TCRB; R74983; Dpde4; dunce	TCRB; R74983; Dpde4; dunce
Mus musculus	MEEBO	ILMN_195111	ILMN_195111	E130016E03RIK	scl0320890.1_19				51709056	XM_485355	E130016E03Rik		ILMN_2512697	005360025	S	17	GCATACATATTACTTTAAAGAACTGAATTTTTAACAGTTTTAGTTACGAC										
Mus musculus	RefSeq	ILMN_234527	ILMN_234527	9030418K01RIK	NM_001081289.1	NM_001081289.1		71532	124486858	NM_001081289.1	9030418K01Rik	NP_001074758.1	ILMN_3037758	000380079	I	1398	CACGTGGACCTGAAGAAAAAGGGAAGTGCAAATACCTGTGGCTATGCCCC	2	+	178156000-178156049	2qH4	Mus musculus RIKEN cDNA 9030418K01 gene (9030418K01Rik), mRNA.				AI851938; RP23-160K5.4	AI851938; RP23-160K5.4
Mus musculus	RefSeq	ILMN_197375	ILMN_234527	9030418K01RIK	NM_001081289.1	NM_001081289.1		71532	124486858	NM_001081289.1	9030418K01Rik	NP_001074758.1	ILMN_1256389	003890348	S	1297	GCAACCCTGCAATGGAAGCCAACGGCAACATCCGAATCCCCAGGCAGTCT	2	+	178155899-178155948	2qH4	Mus musculus RIKEN cDNA 9030418K01 gene (9030418K01Rik), mRNA.				AI851938; RP23-160K5.4	AI851938; RP23-160K5.4
Mus musculus	Riken	ILMN_205440	ILMN_205440	E330028G06RIK	ri|E330028G06|PX00212J03|AK054468|2358					AK054468	E330028G06Rik		ILMN_2572574	005270414	S	1962	TGTAGACGCAGTGACAGGGAGCCAAGCCTTCTAACTACTTTGCCTCTCCC										
Mus musculus	Riken	ILMN_207031	ILMN_207031	C130072N01RIK	ri|C130072N01|PX00666J17|AK081736|774					AK081736	C130072N01Rik		ILMN_1242976	000620228	S	501	GCTCTCTCGTGAGGGGGGCATTCGTCTTGAGTTGGATGTCTCACTGCCTC										
Mus musculus	RefSeq	ILMN_197737	ILMN_197737	LOC239338	XM_139332.2	XM_139332.2			38077707	XM_139332.2	LOC239338		ILMN_1239189	003450296	S	39	GAATGGGAAACTCAGCCTTAAAAACCACAGTAAAGGTCCTCGCCATGCTG										
Mus musculus	MEEBO	ILMN_185810	ILMN_185810	6330400D04	scl44080.1_116						6330400D04		ILMN_1258155	005700681	S	20	AGCGACATATAACCAAAATGTGGACGCAGTCTTTGAGCAAGGGTGGTGGG										
Mus musculus	RefSeq	ILMN_213373	ILMN_213373	AXUD1	NM_153287.3	NM_153287.3		215418	118130102	NM_153287.3	Axud1	NP_695019.1	ILMN_2636403	003170689	S	2651	GCAACTGGTGGCTCTTGAGAGCTCTTACGCCCTTCATTAGCTGATGTTGG	9	-	119880473-119880522	9qF4	Mus musculus AXIN1 up-regulated 1 (Axud1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	4931429D10Rik; taip-3; URAX1	4931429D10Rik; taip-3; URAX1
Mus musculus	RefSeq	ILMN_222570	ILMN_222570	2310016C08RIK	NM_023516.3	NM_023516.3		69573	32129263	NM_023516.3	2310016C08Rik	NP_076005.1	ILMN_2926198	004290152	S	650	TGGACCTAAGTATCTTCTGTTGGTTTACCATTGAGTCTCTTCCCTGAGAG	6	+	29225158-29225207	6qA3.3	Mus musculus RIKEN cDNA 2310016C08 gene (2310016C08Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]		AW049004; MGC103106	AW049004; MGC103106
Mus musculus	RefSeq	ILMN_222570	ILMN_222570	2310016C08RIK	NM_023516.3	NM_023516.3		69573	32129263	NM_023516.3	2310016C08Rik	NP_076005.1	ILMN_1239221	003360241	S	319	TCACGAGGGGTCAGCTAGCCAACACACAGCCTCCTAAGGGCCTGCCAGAC	6	+	29224827-29224876	6qA3.3	Mus musculus RIKEN cDNA 2310016C08 gene (2310016C08Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]		AW049004; MGC103106	AW049004; MGC103106
Mus musculus	MEEBO	ILMN_190223	ILMN_190223	9430088L24RIK	scl0381380.1_63						9430088L24Rik		ILMN_2468254	003190523	S	19	TCCTCTACTGTTGTCTTGAGTCCCAGGAAGACACCTTGGGCTTAGTTCAG										
Mus musculus	Riken	ILMN_201627	ILMN_201627	1110014J17RIK	ri|1110014J17|R000014D21|AK003702|1115					AK003702	1110014J17Rik		ILMN_2543314	004730671	S	985	AAGACTCCTCCAAGGTTGGCCTTGGCCGCTGTCCAGGACACCACGTTCCC										
Mus musculus	RefSeq	ILMN_192800	ILMN_230901	LOC639001	XM_976753.1	XM_976753.1		639001	94377287	XM_976753.1	LOC639001	XP_981847.1	ILMN_2491445	002690010	S	288	GGAGTTGGCTTCCCTTTCTCAGACAGCTGTATATTTCTGTGCCAGCAGTG	6	+	41060140-41060189		PREDICTED: Mus musculus similar to T-cell receptor beta chain V region C5 precursor (LOC639001), mRNA.					
Mus musculus	RefSeq	ILMN_209085	ILMN_209085	2810408P10RIK	NM_198619.2	NM_198619.2		242747	110665711	NM_198619.2	2810408P10Rik	NP_941021.1	ILMN_2703061	004490192	S	4147	GGTAGTGATGCTGGTATAATCTCAGAATTCCGAACCCTGGGGCAGGTGTA	4	-	147197145-147197194	4qE2	Mus musculus RIKEN cDNA 2810408P10 gene (2810408P10Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209085	ILMN_209085	2810408P10RIK	NM_198619.2	NM_198619.2		242747	110665711	NM_198619.2	2810408P10Rik	NP_941021.1	ILMN_1214422	006370291	S	4140	AAAAAGGGGTAGTGATGCTGGTATAATCTCAGAATTCCGAACCCTGGGGC	4	-	147197152-147197201	4qE2	Mus musculus RIKEN cDNA 2810408P10 gene (2810408P10Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_204757	ILMN_204757	B930048N13RIK	ri|B930048N13|PX00164I13|AK047314|2481					AK047314	B930048N13Rik		ILMN_1228496	002320193	S	2422	TCTAAGCCAGCCTTACATTCCAGAAATAAATCACATCTGGCCATGGGGTG										
Mus musculus	RefSeq	ILMN_256711	ILMN_256711	ACSL4	NM_001033600.1	NM_001033600.1		50790	75992924	NM_001033600.1	Acsl4	NP_001028772.1	ILMN_3136205	004290368	A	4290	CCAAACACGTTAAGGGACCAGGGAGATGCCACTGCCCCCCTGAATTTTCA	X	-	138753183-138753232	XqF2	Mus musculus acyl-CoA synthetase long-chain family member 4 (Acsl4), transcript variant 3, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence ISA]	AU018108; Facl4; ACS4; 9430020A05Rik; Lacs4	AU018108; Facl4; ACS4; 9430020A05Rik; Lacs4
Mus musculus	RefSeq	ILMN_210656	ILMN_210656	IRAK1BP1	NM_022986.3	NM_022986.3		65099	142367357	NM_022986.3	Irak1bp1	NP_075362.2	ILMN_2607873	006220369	S	1126	TCTTGCTTGTATTTGTTGTATAAAACTGTAGAACCTGAGCTGCATCTGAG	9	+	82740721-82740770	9qE2	Mus musculus interleukin-1 receptor-associated kinase 1 binding protein 1 (Irak1bp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AIP70; Aabp3; 4921528N06Rik; AI851240; SIMPL	AIP70; Aabp3; 4921528N06Rik; AI851240; SIMPL
Mus musculus	RefSeq	ILMN_189769	ILMN_316411	3110021A11RIK	XM_001479998.1	XM_001479998.1		67289	149255738	XM_001479998.1	3110021A11Rik	XP_001480048.1	ILMN_2464201	007650020	S	926	CTACAAAGCAGCTGCTACCTTATTTTAGACAGCCCAGTTTTCTGCTGCTG					PREDICTED: Mus musculus RIKEN cDNA 3110021A11 gene (3110021A11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196369	ILMN_196369	ACO2	NM_080633.2	NM_080633.2		11429	74024910	NM_080633.2	Aco2	NP_542364.1	ILMN_2748837	000060619	S	2532	CTGCCTAGCCTCAGCCCAGTGAACCACCATTGAGGGCGTTTAAGATAATG	15	+	81745331-81745380	15qE1	Mus musculus aconitase 2, mitochondrial (Aco2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence ISO]; The chemical reactions and pathways involving citrate, 2-hydroxy-1,2,3-propanetricarboyxlate. Citrate is widely distributed in nature and is an important intermediate in the TCA cycle and the glyoxylate cycle [goid 6101] [evidence ISO]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence ISO]; Catalysis of the reaction: citrate = cis-aconitate + H2O = isocitrate; i.e. the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate [goid 3994] [evidence IDA]	D10Wsu183e; Aco-2; Aco3	D10Wsu183e; Aco-2; Aco3
Mus musculus	RefSeq	ILMN_196369	ILMN_196369	ACO2	NM_080633.2	NM_080633.2		11429	74024910	NM_080633.2	Aco2	NP_542364.1	ILMN_1235786	005340092	S	2297	GGAGACCATCCTCCTGAACCACACCTTCAACGAGACCCAGATCGAGTGGT	15	+	81745096-81745145	15qE1	Mus musculus aconitase 2, mitochondrial (Aco2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence ISO]; The chemical reactions and pathways involving citrate, 2-hydroxy-1,2,3-propanetricarboyxlate. Citrate is widely distributed in nature and is an important intermediate in the TCA cycle and the glyoxylate cycle [goid 6101] [evidence ISO]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence ISO]; Catalysis of the reaction: citrate = cis-aconitate + H2O = isocitrate; i.e. the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate [goid 3994] [evidence IDA]	D10Wsu183e; Aco-2; Aco3	D10Wsu183e; Aco-2; Aco3
Mus musculus	RefSeq	ILMN_196314	ILMN_242559	NCTC1	NR_002452.1	NR_002452.1		330677	73476373	NR_002452.1	Nctc1		ILMN_2523613	002030168	S	4821	GGTTGCAGGACAGCCACCCCCAGCCCAGAGTTTTGTAAGCCAACATTCTT	7	-	149739635-149739684	7qF5	Mus musculus non-coding transcript 1 (Nctc1), non-coding RNA.				Rhit1; 9530074L01	Rhit1; 9530074L01
Mus musculus	Riken	ILMN_203010	ILMN_203010	6030419I20RIK	ri|6030419I20|PX00056B08|AK031385|2950					AK031385	6030419I20Rik		ILMN_1241984	003130601	S	2550	AGGTGTCCACAGAAGCCAAAAGTGGGCATTGGAATCCCCTGGCACTGGAG										
Mus musculus	RefSeq	ILMN_217747	ILMN_217747	CYB5R1	NM_028057.2	NM_028057.2		72017	141802562	NM_028057.2	Cyb5r1	NP_082333.1	ILMN_1243370	006350600	S	1356	CCACTACTTAGATGAGTACAGGTTGAGTGCGCTTATAGACACAGTCCTAC	1	+	136308045-136308094	1qE4	Mus musculus cytochrome b5 reductase 1 (Cyb5r1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence IEA]	C80155; B5R.1; 1500005G05Rik; Nqo3a2	C80155; B5R.1; 1500005G05Rik; Nqo3a2
Mus musculus	Riken	ILMN_206248	ILMN_206248	C130093N16RIK	ri|C130093N16|PX00172F14|AK082006|2283					AK082006	C130093N16Rik		ILMN_2578699	001440228	S	1934	GTCTCATGGTTCTATAGTAATAATCGGCTGTGGCCCAGTTGTTGAGGTGA										
Mus musculus	MEEBO	ILMN_216998	ILMN_216998	DIDO1	scl023856.1_29				51556455	NM_011805	Dido1		ILMN_1234384	003890707	S	1090	AGCCTGAGTGTGAGGTTTACGACCCCAATGCCCTGTACTGCATCTGCCGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_205717	ILMN_205717	D730020K15RIK	ri|D730020K15|PX00090J13|AK052809|3840					AK052809	D730020K15Rik		ILMN_1257868	004060553	S	3489	GCCAGAGCTGGTCTTAGAAAACACTACCCCCACCCCCTGAATTTTTTGGG										
Mus musculus	Riken	ILMN_201668	ILMN_201668	1810013D15RIK	ri|1810013D15|R000022B09|AK007475|579					AK007475	1810013D15Rik		ILMN_2543624	006420121	S	366	TGACAGACGCACAGAGTGGCCAATGAGCAGAAGCACTGAAGAAAACAGAC										
Mus musculus	RefSeq	ILMN_208717	ILMN_208717	LCN5	NM_007947.2	NM_007947.2		13863	110835736	NM_007947.2	Lcn5	NP_031973.2	ILMN_2588852	002600202	S	469	GGAGCTTGGACAACAATGGGGAAGCTCTGAATAATTTCCAGAAGATAGCC	2	+	25516418-25516467	2qA3	Mus musculus lipocalin 5 (Lcn5), transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 5501] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MEP10; mE-RABP; Erabp	MEP10; mE-RABP; Erabp
Mus musculus	RefSeq	ILMN_255603	ILMN_255603	COBLL1	NM_177025.3	NM_177025.3		319876	32441278	NM_177025.3	Cobll1	NP_795999.2	ILMN_2782634	003400279	S	3749	TCTGACCCAGAGCACGTACGACAGAGCTTGCTCACTGCAATCCGGTCTGG	2	-	64896551-64896600	2qC1.3	Mus musculus Cobl-like 1 (Cobll1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D430044D16Rik; Coblr1; 1810047P18Rik	D430044D16Rik; Coblr1; 1810047P18Rik
Mus musculus	RefSeq	ILMN_185412	ILMN_237869	WDR60	NM_146039.3	NM_146039.3		217935	113199780	NM_146039.3	Wdr60	NP_666151.3	ILMN_2426833	003390463	S	3137	CTGCGCCTGCTTCTTCAGAAATGAAGACTTGGTGTCGGGAGAATGATGGG	12	-	117446061-117446087:117446088-117446110	12qF2	Mus musculus WD repeat domain 60 (Wdr60), mRNA.				D430033N04Rik; MGC29335	D430033N04Rik; MGC29335
Mus musculus	RefSeq	ILMN_237869	ILMN_237869	WDR60	NM_146039.3	NM_146039.3		217935	113199780	NM_146039.3	Wdr60	NP_666151.3	ILMN_2791074	004180243	S	3128	CATAGCCAGCTGCGCCTGCTTCTTCAGAAATGAAGACTTGGTGTCGGGAG	12	-	117446070-117446087:117446088-117446119	12qF2	Mus musculus WD repeat domain 60 (Wdr60), mRNA.				D430033N04Rik; MGC29335	D430033N04Rik; MGC29335
Mus musculus	Riken	ILMN_202653	ILMN_202653	6030405P19RIK	ri|6030405P19|PX00056H05|AK020047|751					AK020047	6030405P19Rik		ILMN_1227864	004180398	S	618	GAGAGGGTAAGGACACCTCCCACCAATCCTGACAACCTGAGTTCCATTCC										
Mus musculus	RefSeq	ILMN_217810	ILMN_217810	1300018J18RIK	NM_027905.2	NM_027905.2		223776	81295806	NM_027905.2	1300018J18Rik	NP_082181.2	ILMN_2687854	002900110	S	1612	AGTCTCGGCTAGAACAGCTGAGCCCCTCTGACCTGCAGCGCAAGAACAGA	15	+	88929797-88929846	15qE3	Mus musculus RIKEN cDNA 1300018J18 gene (1300018J18Rik), mRNA.			Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	Selo	Selo
Mus musculus	Riken	ILMN_202874	ILMN_202874	A130062D16RIK	ri|A130062D16|PX00123L08|AK037910|944					AK037910	A130062D16Rik		ILMN_1215689	001940097	S	760	GGCAGGTGACGGCATTTTCAGCTTCCAGTGACTTCCAGACAGGTAGAGGC										
Mus musculus	Riken	ILMN_206351	ILMN_206351	D430006A07RIK	ri|D430006A07|PX00193C06|AK084888|869					AK084888	D430006A07Rik		ILMN_2579463	000070128	S	562	GGGCGCCCTTTCTTATCAAAGACGCCTTTTTTGTTGAGGCGAGCCATTGA										
Mus musculus	MEEBO	ILMN_210865	ILMN_210865	9130221F21	scl28876.3.1_123				51712346	XM_485788	9130221F21		ILMN_1240604	002490064	S	2761	AAGAAACGACAAGTGCCAGGGAAGATGCCTTTGCATGGAATGACCCCCAC										
Mus musculus	RefSeq	ILMN_184135	ILMN_184135	TPX2	NM_028109.3	NM_028109.3		72119	88900516	NM_028109.3	Tpx2	NP_082385.3	ILMN_2416145	003140707	S	2726	CCGGGTGTTTTGAAGATGACTCTACACAGCAACTTTGAAGCTAATGAGCC	2	+	152719513-152719562	2qH1	Mus musculus TPX2, microtubule-associated protein homolog (Xenopus laevis) (Tpx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence ISO]; An array of microtubules emanating from a spindle pole MTOC that do not connect to kinetochores [goid 5818] [evidence ISO]	The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart [goid 51225] [evidence ISO]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]	2610005B21Rik; DIL2; p100; REPP86	2610005B21Rik; DIL2; p100; REPP86
Mus musculus	RefSeq	ILMN_218360	ILMN_218360	SPINK10	NM_177829.3	NM_177829.3		328971	114842413	NM_177829.3	Spink10	NP_808497.1	ILMN_2694785	004120097	S	620	ATGGAACCCAGTCTGTGGGACTAATGGATTCACTTACAGCAACGAGTGTG	18	+	62819573-62819622	18qE1	Mus musculus serine peptidase inhibitor, Kazal type 10 (Spink10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	A230091H23Rik	A230091H23Rik
Mus musculus	RefSeq	ILMN_215129	ILMN_215129	SYNGR3	NM_011522.3	NM_011522.3		20974	142370504	NM_011522.3	Syngr3	NP_035652.2	ILMN_2655862	004540327	S	1643	GTGTGGGTCCTTGTGCATAGCAGACTACTCATACATTGCTTGAAGCTGGC	17	-	24822303-24822352	17qA3.3	Mus musculus synaptogyrin 3 (Syngr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_187048	ILMN_187048	4930513N10RIK	scl0319960.3_96						4930513N10Rik		ILMN_1229319	001050156	S	14	CCTTCTTCCCACCCTCCCTGTCCGACTTTCACAAAATATCCCGGGGCTAA										
Mus musculus	RefSeq	ILMN_190949	ILMN_246205	HIP1	NM_146001.1	NM_146001.1		215114	22122460	NM_146001.1	Hip1	NP_666113.1	ILMN_1245338	002070270	S	6261	GGATCCAATGGCATCTGCTGCATGCGTTCATGCAGAAGTGCCCACATACT	5	-	135883925-135883974	5qG2	Mus musculus huntingtin interacting protein 1 (Hip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes [goid 30136] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence ISO]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISO]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISO]; The process by which clathrin triskelia are assembled into the ordered structure known as a clathrin cage [goid 48268] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence ISO]	MGC27616; HIP-1; 2610109B09Rik; mKIAA4113; A930014B11Rik; E130315I21Rik; KIAA4113	MGC27616; HIP-1; 2610109B09Rik; mKIAA4113; A930014B11Rik; E130315I21Rik; KIAA4113
Mus musculus	RefSeq	ILMN_214515	ILMN_222348	SKIV2L	NM_021337.2	NM_021337.2		108077	87252726	NM_021337.2	Skiv2l	NP_067312.2	ILMN_1215606	002900739	S	3808	CAATAAGCTGGGTTGTAGTAGCAGCGAAGGGGCAGATAAATCTCTTTGAG	17	-	34981355-34981404	17qB1	Mus musculus superkiller viralicidic activity 2-like (S. cerevisiae) (Skiv2l), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	Ski2w; SKI; Ddx13; AW214248; 4930534J06Rik	Ski2w; SKI; Ddx13; AW214248; 4930534J06Rik
Mus musculus	MEEBO	ILMN_221851	ILMN_221851	4930578I06RIK	scl45431.3_0	NM_026359.2			31980999	NM_026359.2	4930578I06Rik		ILMN_1246251	000070026	S	555	AGCACGGCTGAGGTGGAGAAGCGCGCAAATGTGCTGATGCTGAAGGAGAC										
Mus musculus	Riken	ILMN_201747	ILMN_201747	2810430B18RIK	ri|2810430B18|ZX00046F16|AK013201|573					AK013201	2810430B18Rik		ILMN_1252497	005870292	S	449	CCCAAGTGCTAGGATTAAAGGCATGTGCAACCACCACCCAGCGATAATAC										
Mus musculus	RefSeq	ILMN_200601	ILMN_253107	DCC	NM_007831.3	NM_007831.3		13176	133778956	NM_007831.3	Dcc	NP_031857.2	ILMN_1226810	003370292	S	367	GCTCCCGAACCCCGGTAACACCTTGGAGAACTAACTCAAGGAAGCAGAGG	18	-	72510307-72510356	18qE2	Mus musculus deleted in colorectal carcinoma (Dcc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process by which the anatomical structures of the spinal cord ventral commissure are generated and organized. Morphogenesis pertains to the creation of form [goid 21965] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C030036D22Rik	C030036D22Rik
Mus musculus	RefSeq	ILMN_209629	ILMN_253107	DCC	NM_007831.3	NM_007831.3		13176	133778956	NM_007831.3	Dcc	NP_031857.2	ILMN_2597650	006290538	S	4756	ATGTTAAAACGGCCTCCCTTGGGCTGGCCGGAAAGGCAAGGTCCCCTTTG	18	-	71422532-71422581	18qE2	Mus musculus deleted in colorectal carcinoma (Dcc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process by which the anatomical structures of the spinal cord ventral commissure are generated and organized. Morphogenesis pertains to the creation of form [goid 21965] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C030036D22Rik	C030036D22Rik
Mus musculus	RefSeq	ILMN_199844	ILMN_199844	LOC383077	XM_356845.1	XM_356845.1			38077944	XM_356845.1	LOC383077		ILMN_2536687	003450717	S	162	GCCGGCGCGGCTCAGCGGGTTTTGGCTTTTTGCACTGAATGTAACCAAGA										
Mus musculus	RefSeq	ILMN_220203	ILMN_220203	HACE1	NM_172473.2	NM_172473.2		209462	142356200	NM_172473.2	Hace1	NP_766061.1	ILMN_1214487	003400605	S	3258	GGGCATTTGCTGTAAATTATATGAGGACATCCAGCTGGTGTGTTCTATCG	10	+	45431684-45431733	10qB2	Mus musculus HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 (Hace1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	A730034A22Rik; mKIAA1320; KIAA1320; BC025474; 1700042J16Rik	A730034A22Rik; mKIAA1320; KIAA1320; BC025474; 1700042J16Rik
Mus musculus	Riken	ILMN_206362	ILMN_206362	UTX	ri|A630079C23|PX00147A18|AK080370|4193					AK080370	Utx		ILMN_2579537	003060768	S	3988	GGAGGTTAGACGCACAGCTCTCCAGAAGACCACCTGCTCCATTGCTCCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219272	ILMN_317709	1700042G07RIK	NM_001099295.1	NM_001099295.1		67323	150010563	NM_001099295.1	1700042G07Rik	NP_001092765.1	ILMN_2706547	001450162	S	281	TGGGGGCTTTCTGGTCCTCTAGAAATGCCCAGAAGCTCGGCCTGCACTTG				4qD1	Mus musculus RIKEN cDNA 1700042G07 gene (1700042G07Rik), mRNA.				RP23-276M23.1	RP23-276M23.1
Mus musculus	RefSeq	ILMN_198358	ILMN_322876	LOC213320	XR_035490.1	XR_035490.1		213320	149255491	XR_035490.1	LOC213320		ILMN_1228313	003850026	S	1928	CCCGAAACATTGTAGCTCATTGCTTTCAGGACGTCTGTCTACTCACTGGG				6qB2.3	PREDICTED: Mus musculus similar to Crn, crooked neck-like 1 (Drosophila) (LOC213320), misc RNA.					
Mus musculus	RefSeq	ILMN_219950	ILMN_219950	MTAP7D1	NM_144941.2	NM_144941.2		245877	31542191	NM_144941.2	Mtap7d1	NP_659190.2	ILMN_2855590	000670543	S	3252	CACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA	4	-	125909459-125909508	4qD2.2	Mus musculus microtubule-associated protein 7 domain containing 1 (Mtap7d1), mRNA.				MGC28498; AV028413; MGC27585; Rprc1; BC019977; mKIAA1187; Parcc1	MGC28498; AV028413; MGC27585; Rprc1; BC019977; mKIAA1187; Parcc1
Mus musculus	RefSeq	ILMN_219950	ILMN_219950	MTAP7D1	NM_144941.2	NM_144941.2		245877	31542191	NM_144941.2	Mtap7d1	NP_659190.2	ILMN_1233362	001110167	S	997	GTCGGCAGTAAACCTGCCCAAACACGTGGACTCTATAATCAACAAGCGGC	4	-	125915795-125915844	4qD2.2	Mus musculus microtubule-associated protein 7 domain containing 1 (Mtap7d1), mRNA.				MGC28498; AV028413; MGC27585; Rprc1; BC019977; mKIAA1187; Parcc1	MGC28498; AV028413; MGC27585; Rprc1; BC019977; mKIAA1187; Parcc1
Mus musculus	RefSeq	ILMN_219950	ILMN_219950	MTAP7D1	NM_144941.2	NM_144941.2		245877	31542191	NM_144941.2	Mtap7d1	NP_659190.2	ILMN_1238058	005220170	S	3115	TAGCTTGTGCTATGTGGAAGAGGCGGGTAGGGTACAGGAGGCAGAACCCC	4	-	125909596-125909645	4qD2.2	Mus musculus microtubule-associated protein 7 domain containing 1 (Mtap7d1), mRNA.				MGC28498; AV028413; MGC27585; Rprc1; BC019977; mKIAA1187; Parcc1	MGC28498; AV028413; MGC27585; Rprc1; BC019977; mKIAA1187; Parcc1
Mus musculus	Riken	ILMN_206479	ILMN_206479	D430015M13RIK	ri|D430015M13|PX00194A08|AK084937|2849					AK084937	D430015M13Rik		ILMN_1252212	006100368	S	2564	ATGAAGACAATGGCACCTGCCACTCAAGGCTGTTTGTGTGTCTCGGTGAG										
Mus musculus	RefSeq	ILMN_256110	ILMN_256110	ADAR	NM_001038587.1	NM_001038587.1		56417	84370215	NM_001038587.1	Adar	NP_001033676.1	ILMN_3021272	001780154	I	5455	AAGAGAGCAAGGTGTCCCTGAGTTCTGTGGACTTGACCCCCGCATCCCAC	3	+	89838957-89839006	3qF1	Mus musculus adenosine deaminase, RNA-specific (Adar), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s) [goid 16553] [evidence ISO]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags [goid 3692] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	mZaADAR; Adar1; AV242451	mZaADAR; Adar1; AV242451
Mus musculus	RefSeq	ILMN_256110	ILMN_256110	ADAR	NM_001038587.1	NM_001038587.1		56417	84370215	NM_001038587.1	Adar	NP_001033676.1	ILMN_3093622	003610730	A	3004	CCGTACCATGTCCTGTAGTGACAAAATCCTACGCTGGAATGTGCTGGGCC	3	+	89835638-89835687	3qF1	Mus musculus adenosine deaminase, RNA-specific (Adar), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s) [goid 16553] [evidence ISO]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags [goid 3692] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	mZaADAR; Adar1; AV242451	mZaADAR; Adar1; AV242451
Mus musculus	RefSeq	ILMN_208953	ILMN_208953	PPM1J	NM_027982.2	NM_027982.2		71887	114205423	NM_027982.2	Ppm1j	NP_082258.2	ILMN_2591135	006580689	S	400	CTGCGAGGTTGTGTATGTGGAAAGTCGGAGGAGCAGGAGCGTTACAGGGG	3	+	104585564-104585613	3qF2.2	Mus musculus protein phosphatase 1J (Ppm1j), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]	2310008J22Rik; Ppp2cz; MGC144853	2310008J22Rik; Ppp2cz; MGC144853
Mus musculus	RefSeq	ILMN_216626	ILMN_325537	MYOM3	NM_001085509.1	NM_001085509.1		242702	147906794	NM_001085509.1	Myom3	NP_001078978.1	ILMN_2673358	006400437	S	5402	CTCAGTGGATCTCGGTACACAACTGGACATTTCTCTGCCTTCCGACTTCC				4qD3	Mus musculus myomesin family, member 3 (Myom3), mRNA.				8430427K15Rik; Gm434	8430427K15Rik; Gm434
Mus musculus	RefSeq	ILMN_260273	ILMN_260273	B230339M05RIK	NM_177658.3	NM_177658.3		228850	124487298	NM_177658.3	B230339M05Rik	NP_808326.2	ILMN_2894574	000510243	S	8225	CCTCCGTTGGATCTGGGTCAGCCTGGGAAGAAGGTGCAGAGCTGTTCGTA	2	+	158324848-158324897	2qH1	Mus musculus RIKEN cDNA B230339M05 gene (B230339M05Rik), mRNA. XM_910657 XM_921691 XM_921698 XM_921704 XM_921713 XM_982128 XM_982164 XM_982240 XM_982273 XM_982333	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AI507211; mKIAA1219; 9330195P16; RP23-392P11.1	AI507211; mKIAA1219; 9330195P16; RP23-392P11.1
Mus musculus	RefSeq	ILMN_196422	ILMN_260273	B230339M05RIK	NM_177658.3	NM_177658.3		228850	124487298	NM_177658.3	B230339M05Rik	NP_808326.2	ILMN_2653936	001300201	S	7982	GAAGCAAATCAAGTTCCTTGTTCCCACAGTAACCAAGGCATCTTCCTCCT	2	+	158324605-158324654	2qH1	Mus musculus RIKEN cDNA B230339M05 gene (B230339M05Rik), mRNA. XM_910657 XM_921691 XM_921698 XM_921704 XM_921713 XM_982128 XM_982164 XM_982240 XM_982273 XM_982333	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AI507211; mKIAA1219; 9330195P16; RP23-392P11.1	AI507211; mKIAA1219; 9330195P16; RP23-392P11.1
Mus musculus	RefSeq	ILMN_203227	ILMN_260273	B230339M05RIK	NM_177658.3	NM_177658.3		228850	124487298	NM_177658.3	B230339M05Rik	NP_808326.2	ILMN_1232379	005860736	S	5645	CCACTCACTTAGCTCCTTAGAGGGCACCCAGCCCACAATCCACAGAACTC	2	+	158322268-158322317	2qH1	Mus musculus RIKEN cDNA B230339M05 gene (B230339M05Rik), mRNA. XM_910657 XM_921691 XM_921698 XM_921704 XM_921713 XM_982128 XM_982164 XM_982240 XM_982273 XM_982333	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AI507211; mKIAA1219; 9330195P16; RP23-392P11.1	AI507211; mKIAA1219; 9330195P16; RP23-392P11.1
Mus musculus	RefSeq	ILMN_211682	ILMN_211682	EIF4A1	NM_144958.2	NM_144958.2		13681	31560594	NM_144958.2	Eif4a1	NP_659207.1	ILMN_2959480	000520689	S	1586	ACAAGGCTGGCCTCATTTGCTGGACCAAATCTACAGGGAGAACCCCTGAG	11	-	69483267-69483316	11qB3	Mus musculus eukaryotic translation initiation factor 4A1 (Eif4a1), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	Eif4; Ddx2a; BM-010	Eif4; Ddx2a; BM-010
Mus musculus	RefSeq	ILMN_229755	ILMN_229755	PTPRD	NM_001014288.2	NM_001014288.2		19266	90403604	NM_001014288.2	Ptprd	NP_001014310.1	ILMN_3103904	006550672	A	7318	GTGCCCTGATACTCCAGCAGAGGTCAGAAGGCTACAGATCCATCCTATCC	4	-	75587453-75587502	4qC3	Mus musculus protein tyrosine phosphatase, receptor type, D (Ptprd), transcript variant a, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	MGC113757; B230219D21Rik; MGC36851; 3000002J10Rik; 1110002J03Rik	MGC113757; B230219D21Rik; MGC36851; 3000002J10Rik; 1110002J03Rik
Mus musculus	RefSeq	ILMN_229755	ILMN_229755	PTPRD	NM_001014288.2	NM_001014288.2		19266	90403604	NM_001014288.2	Ptprd	NP_001014310.1	ILMN_3030623	001940326	I	93	GCTTCATTCTTGCCTCGCATATGTTATCATGTGACCTTGTGTTTTGTTCC	4	-	75779238-75779287	4qC3	Mus musculus protein tyrosine phosphatase, receptor type, D (Ptprd), transcript variant a, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	MGC113757; B230219D21Rik; MGC36851; 3000002J10Rik; 1110002J03Rik	MGC113757; B230219D21Rik; MGC36851; 3000002J10Rik; 1110002J03Rik
Mus musculus	RefSeq	ILMN_188960	ILMN_229755	PTPRD	NM_001014288.2	NM_001014288.2		19266	90403604	NM_001014288.2	Ptprd	NP_001014310.1	ILMN_2501929	003140064	S	7332	CAGCAGAGGTCAGAAGGCTACAGATCCATCCTATCCATCCGTTACATGGC	4	-	75587439-75587488	4qC3	Mus musculus protein tyrosine phosphatase, receptor type, D (Ptprd), transcript variant a, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	MGC113757; B230219D21Rik; MGC36851; 3000002J10Rik; 1110002J03Rik	MGC113757; B230219D21Rik; MGC36851; 3000002J10Rik; 1110002J03Rik
Mus musculus	RefSeq	ILMN_188960	ILMN_229755	PTPRD	NM_001014288.2	NM_001014288.2		19266	90403604	NM_001014288.2	Ptprd	NP_001014310.1	ILMN_1254974	005870601	S	3867	CGACCAGCCATGGTACAAACAGAGGATCAATACCAGTTCTGCTATCGAGC	4	-	75590904-75590930:75592947-75592969	4qC3	Mus musculus protein tyrosine phosphatase, receptor type, D (Ptprd), transcript variant a, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	MGC113757; B230219D21Rik; MGC36851; 3000002J10Rik; 1110002J03Rik	MGC113757; B230219D21Rik; MGC36851; 3000002J10Rik; 1110002J03Rik
Mus musculus	RefSeq	ILMN_212293	ILMN_212293	MTERF	NM_172135.2	NM_172135.2		545725	111161294	NM_172135.2	Mterf	NP_742147.1	ILMN_2624809	002470376	S	1223	AGGAGTCGCAGGCAATCGGACAGGTGTGGCACTGGTTCCAGTTTGGACTT	5	-	3890665-3890714	5qA1	Mus musculus mitochondrial transcription termination factor (Mterf), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4931431L11Rik; 9230106K09Rik	4931431L11Rik; 9230106K09Rik
Mus musculus	RefSeq	ILMN_246126	ILMN_246126	SHANK2	NM_001081370.1	NM_001081370.1		210274	124486976	NM_001081370.1	Shank2	NP_001074839.1	ILMN_3121552	003370056	A	3942	AGCCCTGTGGTTTCACCAACGGAATTGAGCAAAGAGATCCTGCCCACCCC	7	+	151606609-151606658	7qF5	Mus musculus SH3/ankyrin domain gene 2 (Shank2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1022; KIAA1022	mKIAA1022; KIAA1022
Mus musculus	RefSeq	ILMN_199079	ILMN_213020	D930020B18RIK	NM_177335.3	NM_177335.3		216393	119433658	NM_177335.3	D930020B18Rik	NP_796309.2	ILMN_1241856	001410451	S	437	ATTCGTCAACGGTCTTGAAAAAGGAGCGCGGAAAATCGAAAGGGGTCGGG	10	+	121091872-121091921	10qD2	Mus musculus RIKEN cDNA D930020B18 gene (D930020B18Rik), mRNA.				1500017I17Rik	1500017I17Rik
Mus musculus	RefSeq	ILMN_213020	ILMN_213020	D930020B18RIK	NM_177335.3	NM_177335.3		216393	119433658	NM_177335.3	D930020B18Rik	NP_796309.2	ILMN_2632688	001570221	S	3265	CCAAAGAAAGTGCACTCTGGGCGGCTTTGCCTGTGGTGCTCAATGGAACC	10	+	121130632-121130681	10qD2	Mus musculus RIKEN cDNA D930020B18 gene (D930020B18Rik), mRNA.				1500017I17Rik	1500017I17Rik
Mus musculus	RefSeq	ILMN_210431	ILMN_210431	SGCD	NM_011891.2	NM_011891.2		24052	31981344	NM_011891.2	Sgcd	NP_036021.1	ILMN_2605539	006480332	S	762	GCGAAAATCAAACTACCTAGACTGCCTCGTGGATCCTACACACCCACAGG	11	-	46822793-46822842	11qB1.1	Mus musculus sarcoglycan, delta (dystrophin-associated glycoprotein) (Sgcd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	35kDa; delta-SG	35kDa; delta-SG
Mus musculus	RefSeq	ILMN_218560	ILMN_218560	ELN	NM_007925.3	NM_007925.3		13717	141803194	NM_007925.3	Eln	NP_031951.2	ILMN_2697304	006960079	S	3399	GTTGTGTGGGCTGGTTGTCCCCACATGCAGTACTGTAACCCCGTTCTTCC	5	-	135188330-135188335:135188420-135188463	5qG2	Mus musculus elastin (Eln), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IMP]; Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts [goid 43149] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E030024M20Rik; AI385707; AI480567	E030024M20Rik; AI385707; AI480567
Mus musculus	RefSeq	ILMN_213146	ILMN_213146	DAZL	NM_010021.3	NM_010021.3		13164	142384107	NM_010021.3	Dazl	NP_034151.2	ILMN_2634147	001570474	S	2360	CCTTGCTACCTAAAACAATTGGCTGAACATCAATCTGACCTGCCAGGGAC	17	-	50419251-50419300	17qC	Mus musculus deleted in azoospermia-like (Dazl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]; Any constituent part of a cell, the basic structural and functional unit of all organisms [goid 44464] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of meiosis [goid 45836] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of translational initiation [goid 45948] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with the 3' untranslated region of an mRNA molecule [goid 3730] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [evidence IDA]	Tpx-2; Dazla; Tpx2; MGC107400	Tpx-2; Dazla; Tpx2; MGC107400
Mus musculus	RefSeq	ILMN_196447	ILMN_256961	BCL9	NM_029933.3	NM_029933.3		77578	56606136	NM_029933.3	Bcl9	NP_084209.3	ILMN_2524235	002850152	S	316	ATCCCAGCCATCCCCCTGTGACTCCAAGAGTGGGGGCCATACCCCTAAAG	3	-	97019181-97019230	3qF2.1	Mus musculus B-cell CLL/lymphoma 9 (Bcl9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]		8030475K17Rik; Gm130; 2610202E01Rik; A330041G23Rik	8030475K17Rik; Gm130; 2610202E01Rik; A330041G23Rik
Mus musculus	RefSeq	ILMN_256961	ILMN_256961	BCL9	NM_029933.3	NM_029933.3		77578	56606136	NM_029933.3	Bcl9	NP_084209.3	ILMN_2808751	005390603	S	4536	CCGGGGCTGCTTTGAGGGAGGAGGGAACCAAGAATGTATGGATTTACCGG	3	-	97008617-97008666	3qF2.1	Mus musculus B-cell CLL/lymphoma 9 (Bcl9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]		8030475K17Rik; Gm130; 2610202E01Rik; A330041G23Rik	8030475K17Rik; Gm130; 2610202E01Rik; A330041G23Rik
Mus musculus	RefSeq	ILMN_206339	ILMN_256961	BCL9	NM_029933.3	NM_029933.3		77578	56606136	NM_029933.3	Bcl9	NP_084209.3	ILMN_1248180	002490041	S	2740	AATGCACCAAGTCCAGTCTCCAATGCTGGGCTCACCCTCCGGGAACCTCA	3	-	97012652-97012701	3qF2.1	Mus musculus B-cell CLL/lymphoma 9 (Bcl9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]		8030475K17Rik; Gm130; 2610202E01Rik; A330041G23Rik	8030475K17Rik; Gm130; 2610202E01Rik; A330041G23Rik
Mus musculus	RefSeq	ILMN_222530	ILMN_222530	BDKRB1	NM_007539.2	NM_007539.2		12061	83582803	NM_007539.2	Bdkrb1	NP_031565.1	ILMN_2750957	003930215	S	832	GACCCAAGGACAGCAAGACAATGGGGCTGATCCTCACACTGGTAGCCTCC	12	+	106843132-106843181	12qE	Mus musculus bradykinin receptor, beta 1 (Bdkrb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with bradykinin to initiate a change in cell activity [goid 4947] [evidence IEA]; Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IDA]	BKR1; B1BKR; Bdkrb; B1R; BRADYB1	BKR1; B1BKR; Bdkrb; B1R; BRADYB1
Mus musculus	RefSeq	ILMN_246848	ILMN_246848	BNIP2	NM_001008238.2	NM_001008238.2		12175	118131127	NM_001008238.2	Bnip2	NP_001008239.1	ILMN_3163063	002370326	A	822	CGTCTTTAACTTGGCCGAGCTGGCAGAGCTTGTTCCCATGGAGTATGTCG	9	+	69851403-69851452	9qD	Mus musculus BCL2/adenovirus E1B interacting protein 2 (Bnip2), transcript variant alpha, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]		BNIP2beta; 5730523P12Rik; Nip21	BNIP2beta; 5730523P12Rik; Nip21
Mus musculus	Riken	ILMN_205231	ILMN_205231	RAB23	ri|E230016O05|PX00209J06|AK054079|2048					AK054079	Rab23		ILMN_1254558	001470224	S	1727	TGGGTCACAGTCTCCATCACAGAGGGCATTCAAGGCAGGGACTCAGGCAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45861] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199510	ILMN_315808	LOC100041194	XM_001475946.1	XM_001475946.1		100041194	149263537	XM_001475946.1	LOC100041194	XP_001475996.1	ILMN_1259474	004150767	S	5174	AGATGCCCAGCCTCAAGATGCCCAAGATGGACCTCAAGGGACCCCACGTA	12	-	114019530-114019579	12qF1	PREDICTED: Mus musculus similar to KIAA2019 protein (LOC100041194), mRNA.					
Mus musculus	RefSeq	ILMN_199511	ILMN_315808	LOC100041194	XM_001475946.1	XM_001475946.1		100041194	149263537	XM_001475946.1	LOC100041194	XP_001475996.1	ILMN_2535483	006020681	S	1830	GGACGTGGTGGCCAAAGACAGCAAGTTCAAGATGCCCAAGTTCAAGATGC	12	-	114022932-114022981	12qF1	PREDICTED: Mus musculus similar to KIAA2019 protein (LOC100041194), mRNA.					
Mus musculus	RefSeq	ILMN_197070	ILMN_315808	LOC100041194	XM_001475946.1	XM_001475946.1		100041194	149263537	XM_001475946.1	LOC100041194	XP_001475996.1	ILMN_1235891	001090360	S	929	GAATCAAACGGAAACTCTCGGCCAGCAAGGGAGAGGAAGGGGCTGTTCAG	12	-	114023953-114024002	12qF1	PREDICTED: Mus musculus similar to KIAA2019 protein (LOC100041194), mRNA.					
Mus musculus	RefSeq	ILMN_219883	ILMN_219883	KIF5C	NM_008449.2	NM_008449.2		16574	45433559	NM_008449.2	Kif5c	NP_032475.2	ILMN_1216662	003190639	S	6712	CCTGGCCCTCGGAAAACTCTGGCTATCTCCTAGGTTCTAAAATGAAGATG	2	+	49630170-49630219	2qC1.1	Mus musculus kinesin family member 5C (Kif5c), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence TAS]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence ISS]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence TAS]	NKHC; NKHC-2; NKHC2; mKIAA0531; KINN	NKHC; NKHC-2; NKHC2; mKIAA0531; KINN
Mus musculus	MEEBO	ILMN_195924	ILMN_195924	PTN	scl29147.5_215				6679542	NM_008973	Ptn		ILMN_1248991	001240053	S	20	TTTTACATCTGAGGAAAAAAATCTAGGAAAATAAAACAAGTGATGCTGAA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IDA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209380	ILMN_209380	OLFR247	NM_146269.2	NM_146269.2		258266	115529277	NM_146269.2	Olfr247	NP_666381.2	ILMN_2595291	005820138	S	426	GAAGTTGGCTGGTGCATCTTGGATGACTGGGATCCTGGTAGAATCAGCCC	10	-	129412130-129412179	10qD3	Mus musculus olfactory receptor 247 (Olfr247), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR265-1	MOR265-1
Mus musculus	RefSeq	ILMN_200477	ILMN_200477	LOC383248	XM_356943.1	XM_356943.1			38082556	XM_356943.1	LOC383248		ILMN_2538901	001770020	S	258	TGCCAACTGTAAAAACAGTAAATACAGAGAAGTGTGTTCGCACATCTACC										
Mus musculus	MEEBO	ILMN_213341	ILMN_213341	OSBPL5	scl30448.26_191				15011888	NM_024289	Osbpl5		ILMN_2771559	000110554	S	3829	GAGGCACCTATGCGTACTCACATTTGGAGCCTTAATACTTAGTTGGTGCC							The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]			
Mus musculus	RefSeq	ILMN_223961	ILMN_235580	RSU1	NM_009105.3	NM_009105.3		20163	118130544	NM_009105.3	Rsu1	NP_033131.2	ILMN_1254341	004040360	S	1201	GGTTTCAGTCCCTTGAATAAACGTCACAAGGCTGCTTATTATCAAAAAAT	2	-	12998797-12998846	2qA1	Mus musculus Ras suppressor protein 1 (Rsu1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	rsp-1	rsp-1
Mus musculus	RefSeq	ILMN_207356	ILMN_254829	EG668311	XM_001000809.1	XM_001000809.1		668311	94406005	XM_001000809.1	EG668311	XP_001000809.1	ILMN_1244972	002510370	S	1120	CCATCTGTGGTGGTCAAGGAAGAGACCCTAAACGGTGGGAACACTCCAGC	19	-	40905176-40905225	19qC3	PREDICTED: Mus musculus predicted gene, EG668311 (EG668311), mRNA.					
Mus musculus	RefSeq	ILMN_197723	ILMN_197723	LOC229544	XM_143314.2	XM_143314.2			38077604	XM_143314.2	LOC229544		ILMN_2529145	003450184	S	241	AGTATTGATGACTGTTCCACATCATCCAGGGGCTTCACTACCACCCTAGG										
Mus musculus	RefSeq	ILMN_218940	ILMN_218940	PCBP1	NM_011865.3	NM_011865.3		23983	47271536	NM_011865.3	Pcbp1	NP_035995.1	ILMN_2702197	002470195	S	921	ACGCCTACTCGATTCAAGGACAACACACCATTTCTCCGCTGGATCTGGCC	6	-	86475191-86475240	6qD1	Mus musculus poly(rC) binding protein 1 (Pcbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence TAS]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [evidence TAS]	WBP17; [a]CP-1; alphaCP-1	WBP17; [a]CP-1; alphaCP-1
Mus musculus	RefSeq	ILMN_222443	ILMN_222443	CLEC4N	NM_020001.1	NM_020001.1		56620	9910157	NM_020001.1	Clec4n	NP_064385.1	ILMN_2993314	005360056	S	956	GGGGAGTAGGATCTTCAGCTAAGGAATTGCCTCTGTCAGCTTGACCAGTC	6	+	123196784-123196833	6qF2	Mus musculus C-type lectin domain family 4, member n (Clec4n), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Clecsf10; dectin-2	Clecsf10; dectin-2
Mus musculus	RefSeq	ILMN_216529	ILMN_216529	IRAK4	NM_029926.3	NM_029926.3		266632	31559901	NM_029926.3	Irak4	NP_084202.2	ILMN_2812164	003130669	S	2406	TGGTAGACATGGTAGGCCCCCTTGCTGTATATTGATTGTACTGCTCCCGC	15	+	94396138-94396187	15qE3	Mus musculus interleukin-1 receptor-associated kinase 4 (Irak4), mRNA.		The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IPI]	NY-REN-64; 9330209D03Rik; 8430405M07Rik; IRAK-4	NY-REN-64; 9330209D03Rik; 8430405M07Rik; IRAK-4
Mus musculus	MEEBO	ILMN_187783	ILMN_187783	HIST1H3D	scl0319149.1_41				30061336	NM_178204	Hist1h3d		ILMN_1231671	005670519	S	1	CAGAGCCACCCCCGTTTTCTATAAAAGGCTGTATATCGATAAGCTTTTAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	Riken	ILMN_202121	ILMN_202121	2810489J07RIK	ri|2810489J07|ZX00067J02|AK013453|943					AK013453	2810489J07Rik		ILMN_1238159	003830746	S	639	CCTCTTGGACAGAATTGCCGATGATGAGGCCGTGGACTGGAGTGACGTGT										
Mus musculus	RefSeq	ILMN_213444	ILMN_327838	LOC100047653	XM_001479089.1	XM_001479089.1		100047653	149263730	XM_001479089.1	LOC100047653	XP_001479139.1	ILMN_1244726	002570538	S	1391	TGGCACCGAGGGTCTTCTTCCGGGGCCACACACAGGCCCAAAGCCATCGG					PREDICTED: Mus musculus hypothetical protein LOC100047653, transcript variant 2 (LOC100047653), mRNA.					
Mus musculus	MEEBO	ILMN_212409	ILMN_212409	PPP1R3B	scl00244416.2_151	NM_177741.2			31343147	NM_177741.2	Ppp1r3b		ILMN_2626098	004150097	S	3301	CCACTGTAGACAAATTTACGCAGCTCAGAAGACGACAGGCCCCTTGCTTG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_205464	ILMN_205464	A530065H22RIK	ri|A530065H22|PX00142F09|AK041036|447					AK041036	A530065H22Rik		ILMN_1216762	000290408	S	95	GTGGAAGAGGATTAGGATCCAAACTGGCGGATTTCCCGACCTTCGCTGCC										
Mus musculus	RefSeq	ILMN_199515	ILMN_199515	LOC383602	XM_357148.1	XM_357148.1			38073835	XM_357148.1	LOC383602		ILMN_1214111	004220487	S	97	AAGTACTCTACGGAGGTACCCATGCCATCTGAGGAGCCACAATCTTGGCC										
Mus musculus	RefSeq	ILMN_220774	ILMN_220774	D6MM5E	NM_033079.1	NM_033079.1		110958	14861845	NM_033079.1	D6Mm5e	NP_149070.1	ILMN_1215592	005960026	S	1518	TGGTTCCCCTCCCAGTGGCTCCTGCCCCACGTAGAGCTCTGAAGATGACA	6	+	82950180-82950229	6qC3	Mus musculus DNA segment, Chr 6, Miriam Meisler 5, expressed (D6Mm5e), mRNA.					
Mus musculus	RefSeq	ILMN_211105	ILMN_211105	DBF4	NM_013726.2	NM_013726.2		27214	118130853	NM_013726.2	Dbf4	NP_038754.1	ILMN_2952661	003930176	S	1893	GTGGGTCACCAGTACAGTCTCTATTGGACCTTTTTCAGACAAGCGAGGAG	5	-	8397360-8397409	5qA1	Mus musculus DBF4 homolog (S. cerevisiae) (Dbf4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A cell cycle process that modulates the frequency, rate or extent of the progression through the S phase of the mitotic cell cycle [goid 7090] [evidence ISA]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [evidence ISA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISA]	AA545217; Ask	AA545217; Ask
Mus musculus	Riken	ILMN_202311	ILMN_202311	4833408P15RIK	ri|4833408P15|PX00027P14|AK014667|2033					AK014667	4833408P15Rik		ILMN_2548618	004150246	S	1937	CCTGGATGGACCAAGGTATTGCTGACGGTAGTAGAAGGAATTGTGGGGGG										
Mus musculus	RefSeq	ILMN_221918	ILMN_221918	FUT2	NM_018876.3	NM_018876.3		14344	144227196	NM_018876.3	Fut2	NP_061364.2	ILMN_1227075	002120091	S	2394	CTCTCCAGACCCCCTGCTAAATTGGAAGTGCTGATCCTGTGCATGAGAAG	7	-	52904386-52904435	7qB4	Mus musculus fucosyltransferase 2 (Fut2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IDA]; Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-R = GDP + alpha-L-fucosyl-(1,2)-beta-D-galactosyl-R [goid 8107] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197381	ILMN_197381	LOC380876	XM_354782.1	XM_354782.1			38075474	XM_354782.1	LOC380876		ILMN_1231918	004040711	S	1331	AGGGCAGTCTATTACTCTGAATGCCTTGGTATGATCTTTAGCCAATCCAC										
Mus musculus	MEEBO	ILMN_184648	ILMN_184648	NARG1	scl23217.19_529				28269696	NM_053089	Narg1		ILMN_2420368	006900332	S	2	GGTCGACCTTCCTGATGGGAGGAGTCTTCCTATCTGCATCGTGCTCCTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223608	ILMN_223608	BMPER	NM_028472.1	NM_028472.1		73230	24371215	NM_028472.1	Bmper	NP_082748.1	ILMN_3008361	000160097	S	3438	CCATTGAGTGGCTAGGGGCCATCTACGTTTTGTCACTATCTCATGGTGTA	9	+	23289291-23289340	9qA3	Mus musculus BMP-binding endothelial regulator (Bmper), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CV-2; Cv2; 3110056H04Rik; Crim3	CV-2; Cv2; 3110056H04Rik; Crim3
Mus musculus	RefSeq	ILMN_235389	ILMN_235389	COQ10B	NM_001039710.1	NM_001039710.1		67876	89337273	NM_001039710.1	Coq10b	NP_001034799.1	ILMN_3031099	004830047	I	229	GCTGCCTGTGGTGTACTGATAAACAGAACCCTTCCACCGTGTGCTGCAGT	1	+	55118126-55118175	1qC1.2	Mus musculus coenzyme Q10 homolog B (S. cerevisiae) (Coq10b), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			1500041J02Rik; 1700030I21Rik; AW742641; AV002237; 9530077A17Rik	1500041J02Rik; 1700030I21Rik; AW742641; AV002237; 9530077A17Rik
Mus musculus	RefSeq	ILMN_235389	ILMN_235389	COQ10B	NM_001039710.1	NM_001039710.1		67876	89337273	NM_001039710.1	Coq10b	NP_001034799.1	ILMN_3104462	004220239	A	1384	GGGAAGTTGTTTCCCAGATGTACTGAGTGGGGTTTTTGTTCTGGTCTTTT	1	+	55129197-55129246	1qC1.2	Mus musculus coenzyme Q10 homolog B (S. cerevisiae) (Coq10b), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			1500041J02Rik; 1700030I21Rik; AW742641; AV002237; 9530077A17Rik	1500041J02Rik; 1700030I21Rik; AW742641; AV002237; 9530077A17Rik
Mus musculus	RefSeq	ILMN_188887	ILMN_235389	COQ10B	NM_001039710.1	NM_001039710.1		67876	89337273	NM_001039710.1	Coq10b	NP_001034799.1	ILMN_1215830	000730639	S	299	CGAGAACTTTCTTCAGAATCTCTGCGCCACTAGTAAATAAACGAAAGGAG	1	+	55118196-55118245	1qC1.2	Mus musculus coenzyme Q10 homolog B (S. cerevisiae) (Coq10b), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			1500041J02Rik; 1700030I21Rik; AW742641; AV002237; 9530077A17Rik	1500041J02Rik; 1700030I21Rik; AW742641; AV002237; 9530077A17Rik
Mus musculus	Riken	ILMN_202359	ILMN_202359	4930473A02RIK	ri|4930473A02|PX00032I08|AK015562|1408					AK015562	4930473A02Rik		ILMN_2549002	000110014	S	1294	TGTTTGAGAAGCAACACCTTCTAGGCTCCTGTGGAACTTCCTGAGATTCC										
Mus musculus	RefSeq	ILMN_220369	ILMN_220369	0610006I08RIK	NM_025791.1	NM_025791.1		66836	13385261	NM_025791.1	0610006I08Rik	NP_080067.1	ILMN_2721178	003120133	S	190	GACCTCCCTGGCTGTTGCAGCCTTGTCCAGACCTCTGAGCCGAGTACCTG	19	+	8845675-8845724	19qA	Mus musculus RIKEN cDNA 0610006I08 gene (0610006I08Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_220369	ILMN_220369	0610006I08RIK	NM_025791.1	NM_025791.1		66836	13385261	NM_025791.1	0610006I08Rik	NP_080067.1	ILMN_2896528	001940731	S	521	GGCCGGCGCTTCTACTTCCTTTTGGACAAAGCTGGACACTTTCCCAACAC	19	+	8846738-8846787	19qA	Mus musculus RIKEN cDNA 0610006I08 gene (0610006I08Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_197284	ILMN_197284	LOC380859	XM_354764.1	XM_354764.1			38074961	XM_354764.1	LOC380859		ILMN_1214909	006060280	S	66	AGGAAGAACAGACTCCCCCAGAACTGGTCACTGACACAGACAAGGAACAG										
Mus musculus	RefSeq	ILMN_198061	ILMN_198061	LOC277236	XM_203692.3	XM_203692.3			38081296	XM_203692.3	LOC277236		ILMN_2530354	003450152	S	1999	TGGGGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAAAACCGAATGGC										
Mus musculus	RefSeq	ILMN_243054	ILMN_243054	QARS	NM_133794.1	NM_133794.1		97541	55741702	NM_133794.1	Qars	NP_598555.1	ILMN_2989263	003890224	S	1881	ACCAGGCTATAAGCGCCTAGCTTCGGGCCAGCCTGTGGGCCTGAGACACA	9	+	108416882-108416931	9qF2	Mus musculus glutaminyl-tRNA synthetase (Qars), mRNA.	A multienzyme complex found in all multicellular eukaryotes composed of eight proteins with aminoacyl-tRNA synthetase activities (abbreviated as: ArgRS, AspRS, GluProRS, GlnRS, IleRS, LeuRS, LysRS, MetRS where RS is the enzyme, preceded by the amino acid it uses as a substrate) as well as three non-synthetase proteins (p43, p38, and p18) with diverse functions. Several of these subunits are known dimers, so the total polypeptide count in the multisynthetase complex is at least fifteen. All of the enzymes in this assembly catalyze the same reaction, the covalent attachment of an amino acid to either the 2'- or 3'-hydroxyl of the 3'-terminal adenosine of tRNA, but using different substrates [goid 17101] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]; Catalysis of the reaction: ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln) [goid 4819] [evidence ISO]	C80286; 1110018N24Rik; GLNRS; MGC105238; 1200016L19Rik	C80286; 1110018N24Rik; GLNRS; MGC105238; 1200016L19Rik
Mus musculus	RefSeq	ILMN_243054	ILMN_243054	QARS	NM_133794.1	NM_133794.1		97541	55741702	NM_133794.1	Qars	NP_598555.1	ILMN_2989257	005340487	S	2086	GAGCGCCTATTCCAGCACAAGAACCCCGAAGACCCTGTTGAAGTGCCTGG	9	+	108417197-108417204:108417298-108417339	9qF2	Mus musculus glutaminyl-tRNA synthetase (Qars), mRNA.	A multienzyme complex found in all multicellular eukaryotes composed of eight proteins with aminoacyl-tRNA synthetase activities (abbreviated as: ArgRS, AspRS, GluProRS, GlnRS, IleRS, LeuRS, LysRS, MetRS where RS is the enzyme, preceded by the amino acid it uses as a substrate) as well as three non-synthetase proteins (p43, p38, and p18) with diverse functions. Several of these subunits are known dimers, so the total polypeptide count in the multisynthetase complex is at least fifteen. All of the enzymes in this assembly catalyze the same reaction, the covalent attachment of an amino acid to either the 2'- or 3'-hydroxyl of the 3'-terminal adenosine of tRNA, but using different substrates [goid 17101] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]; Catalysis of the reaction: ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln) [goid 4819] [evidence ISO]	C80286; 1110018N24Rik; GLNRS; MGC105238; 1200016L19Rik	C80286; 1110018N24Rik; GLNRS; MGC105238; 1200016L19Rik
Mus musculus	RefSeq	ILMN_197496	ILMN_197496	LOC193563	XM_110074.2	XM_110074.2			38076291	XM_110074.2	LOC193563		ILMN_1234524	003420059	S	28	GGGCTCCTGTGCACCCAGGTTTGCTCCAGAACAGACTCTTCTGTCCTAGG										
Mus musculus	RefSeq	ILMN_218936	ILMN_218936	CLEC4F	NM_016751.2	NM_016751.2		51811	31560463	NM_016751.2	Clec4f	NP_058031.2	ILMN_2876653	001510184	S	2353	TCCTCGACCTGGGTGGAATGGCATTCCTTAATAAATAGTGTCTTCGCTGC				6qC3	Mus musculus C-type lectin domain family 4, member f (Clec4f), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KUCR_MOUSE; D18063; Kclr; Clecsf13	KUCR_MOUSE; D18063; Kclr; Clecsf13
Mus musculus	RefSeq	ILMN_199957	ILMN_199957	LOC386474	XM_359311.1	XM_359311.1			38079209	XM_359311.1	LOC386474		ILMN_1246882	007610243	S	1334	GGCAGCCAAAGCAGGTCTATTTTGATGACTCTTTAGAAGAAGTCACAGAG										
Mus musculus	RefSeq	ILMN_195598	ILMN_195598	TTYH3	NM_175274.3	NM_175274.3		78339	141803168	NM_175274.3	Ttyh3	NP_780483.1	ILMN_1221311	005550296	S	4299	TGACCAGGGTCTCTTTGTTTTTCATCACAGCGGTGGTGTGCCGCACCCTT	5	-	141096834-141096883	5qG2	Mus musculus tweety homolog 3 (Drosophila) (Ttyh3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence ISO]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	AI414930; 2900029G13Rik	AI414930; 2900029G13Rik
Mus musculus	MEEBO	ILMN_191212	ILMN_191212	2010003K15RIK	scl075606.2_1						2010003K15Rik		ILMN_2477136	004760026	S	10	CCGGCCCTGTCCTGGTCCTGGGGATCTTCCTGCCTGTGACCTTGCTGCTT										
Mus musculus	MEEBO	ILMN_222128	ILMN_222128	P4HA2	scl41559.17.1_109				6754969	NM_011031	P4ha2		ILMN_2777082	003310537	S	1974	GTGTCTTGGCATGGCTGCGGTAGAGCCAGACTATAGCACCCGGCACGGTG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The posttranslational modification of peptidyl-proline to form 4-hydroxy-L-proline; catalyzed by procollagen-proline,2-oxoglutarate-4-dioxygenase [goid 18401] [evidence IDA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2 [goid 4656] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213513	ILMN_213513	OLFR904	NM_146801.2	NM_146801.2		258797	116174757	NM_146801.2	Olfr904	NP_667012.2	ILMN_2637819	002680497	S	877	AGGAACAAAGATGTCAAGATAGCCCTGAGAAAAACCCTGAGCAGATGGAA	9	+	38272504-38272553	9qA5.1	Mus musculus olfactory receptor 904 (Olfr904), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR167-3	MOR167-3
Mus musculus	RefSeq	ILMN_216202	ILMN_216202	1110008P14RIK	NM_198001.1	NM_198001.1		73737	37574083	NM_198001.1	1110008P14Rik	NP_932118.1	ILMN_1225594	001050673	S	448	CATCTCGGGTACTGGCCTCCAGATCCTAGTGGGTCTACCAGCCTGGACCA	2	-	32234749-32234798	2qB	Mus musculus RIKEN cDNA 1110008P14 gene (1110008P14Rik), mRNA.				C79326; RP23-161B9.10	C79326; RP23-161B9.10
Mus musculus	RefSeq	ILMN_234393	ILMN_234393	DEFB26	NM_001039120.1	NM_001039120.1		654457	84993769	NM_001039120.1	Defb26	NP_001034209.1	ILMN_3161354	001240561	S	170	GCTGCATTCACCGAACTCTATCAGAAGACAAACTACCCTCAGGACCTCCC	2	-	152333875-152333924	2qH1	Mus musculus defensin beta 26 (Defb26), mRNA.				Defb26	Defb26
Mus musculus	Riken	ILMN_207347	ILMN_207347	9630025G02RIK	ri|9630025G02|PX00654D01|AK079328|3119					AK079328	9630025G02Rik		ILMN_2586930	005260743	S	2540	GCAGCACCTCCCATTCTTCTTTCCACAAGGCAGGGCGCATTCAGGTTCTC										
Mus musculus	MEEBO	ILMN_194231	ILMN_194231	ZBTB11	scl0271377.2_77	NM_173026.1			27370539	NM_173026.1	Zbtb11		ILMN_2504555	000840022	S	15	GAGACGATATGCCTTTATAATGCACACATTGAAACATGAAAGAGCTAGAG										
Mus musculus	RefSeq	ILMN_214150	ILMN_214150	ACOT3	NM_134246.3	NM_134246.3		171281	118129952	NM_134246.3	Acot3	NP_599007.1	ILMN_2644827	002230600	S	2225	GCAGAAACTGCCGTTTTTCGGAAACTCAGTCTCCCAGCGAGCTGTAGTGC	12	+	85400146-85400195	12qD1	Mus musculus acyl-CoA thioesterase 3 (Acot3), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving unsaturated monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-) and one or more unsaturated C-C bonds [goid 32789] [evidence IDA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence IDA]; The chemical reactions and pathways involving saturated monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-) and fully saturated C-C bonds [goid 32788] [evidence IDA]; The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [evidence IDA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence TAS]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IDA]	PTE-Ia; Pte2a; AW108394	PTE-Ia; Pte2a; AW108394
Mus musculus	Riken	ILMN_203084	ILMN_203084	A430092C21RIK	ri|A430092C21|PX00139C19|AK079848|1098					AK079848	A430092C21Rik		ILMN_2554612	000460376	S	876	GCAGTGCAGCTGGCCAAGGATGGATTGAAATCTACGAAGCGGTGGGACAA										
Mus musculus	Riken	ILMN_205611	ILMN_205611	B930088D13RIK	ri|B930088D13|PX00166J13|AK047558|4232					AK047558	B930088D13Rik		ILMN_1229834	003180707	S	4080	AGCCTTGGCAGGTAGCAGGTACACACATAATACAGACACACATGCAGGCC										
Mus musculus	RefSeq	ILMN_198362	ILMN_198362	LOC381182	XM_358521.1	XM_358521.1			38084420	XM_358521.1	LOC381182		ILMN_1222138	000770500	S	203	GGCCAGGAGTAGGCGCGTTTTTATTCCCACTCGAAGGATGCCGTGACTCC										
Mus musculus	RefSeq	ILMN_220346	ILMN_220346	6430537H07RIK	NM_178689.2	NM_178689.2		226265	31341093	NM_178689.2	6430537H07Rik	NP_848804.1	ILMN_3007065	006590341	S	2168	AGAGGCTAATGTATTTCCGATGTCGGGTTCACGCCCAGTCACGCACCCCT	19	+	59024270-59024319	19qD3	Mus musculus RIKEN cDNA 6430537H07 gene (6430537H07Rik), mRNA.	A multimeric enzyme complex, usually a dimer or an octamer, that catalyzes the conversion of 2-phospho-D-glycerate to phosphoenolpyruvate and water [goid 15] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Catalysis of the reaction: 2-phospho-D-glycerate = phosphoenolpyruvate + H2O [goid 4634] [evidence IEA]	MGC30738	MGC30738
Mus musculus	RefSeq	ILMN_223580	ILMN_223580	1700011A15RIK	NM_025487.2	NM_025487.2		66322	141803570	NM_025487.2	1700011A15Rik	NP_079763.1	ILMN_1232564	001740685	S	598	CCTCCCTCCGGAGAAGACTAGAAACTGGCGCTTCTGCCCAAAGACTTGGT	15	+	101284064-101284113	15qF2	Mus musculus RIKEN cDNA 1700011A15 gene (1700011A15Rik), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200866	ILMN_200866	LOC384616	XM_357745.1	XM_357745.1			38086664	XM_357745.1	LOC384616		ILMN_1235195	000770553	S	1240	GCAAAACCCTCCAAATGCCATCAGTGTGATGAAGCCTTTGTATGTCACAG										
Mus musculus	RefSeq	ILMN_241215	ILMN_241215	C4A	NM_011413.2	NM_011413.2		625018	126215531	NM_011413.2	C4a	NP_035543.2	ILMN_2911128	004900504	S	3144	CTGAGACCAAGGACCATGCTGTGCATCTGATCCAGAAAGGCCACGTTCGG	17	-	34956269-34956318	17qB1	Mus musculus complement component 4A (Rodgers blood group) (C4a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Slp	Slp
Mus musculus	RefSeq	ILMN_214259	ILMN_241215	C4A	NM_011413.2	NM_011413.2		625018	126215531	NM_011413.2	C4a	NP_035543.2	ILMN_1215092	000130348	S	4926	ATGGCAGAGCTGCCTTCCGTCTCTTTGAGTCCAAGATCACCCAAGTCCTG	17	-	34953492-34953495:34953666-34953711	17qB1	Mus musculus complement component 4A (Rodgers blood group) (C4a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Slp	Slp
Mus musculus	RefSeq	ILMN_214259	ILMN_241215	C4A	NM_011413.2	NM_011413.2		625018	126215531	NM_011413.2	C4a	NP_035543.2	ILMN_2646052	000060368	S	5142	CCTGGATTGAGGAGATGCCTTCAGAACAAATGTGCAAGAGCACCCGCCAT	17	-	34953397-34953446	17qB1	Mus musculus complement component 4A (Rodgers blood group) (C4a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Slp	Slp
Mus musculus	MEEBO	ILMN_185341	ILMN_185341	6030439E18	scl52759.3_441						6030439E18		ILMN_1252149	001410059	S	2	AGTGGCCAACTTGTCCGGGGATGTAGTATGATTCTGCGGTCAGAGAAGGA										
Mus musculus	Riken	ILMN_203819	ILMN_203819	A230055O04RIK	ri|A230055O04|PX00128B02|AK038695|1982					AK038695	A230055O04Rik		ILMN_1217638	001410630	S	1926	CCACTGTGTCACACCATTGATGATGAGTGTGAGCATGGGCCACCATCAGC										
Mus musculus	RefSeq	ILMN_186238	ILMN_242736	2610035D17RIK	XM_902349.2	XM_902349.2		72386	94390920	XM_902349.2	2610035D17Rik	XP_907442.2	ILMN_1226017	001090044	S	1280	CCCAGCTTCCTTGTGCTCTATCTGGTGTGTTTGTATGGCTCTTCAGTGAC	11	-	112905398-112905447	11qE2	PREDICTED: Mus musculus RIKEN cDNA 2610035D17 gene (2610035D17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_206366	ILMN_236865	PALLD	NM_001081390.1	NM_001081390.1		72333	124487060	NM_001081390.1	Palld	NP_001074859.1	ILMN_1259364	001740088	S	2420	GCCAGAGGAAACGGCAGCCAATCAGGAGTACAAAGTCTCTAGCTGCGAGC	8	-	64012347-64012372:64014483-64014506	8qB3.1	Mus musculus palladin, cytoskeletal associated protein (Palld), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence ISS]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	MGC150248; 6030492A02; 2410003B16Rik	MGC150248; 6030492A02; 2410003B16Rik
Mus musculus	RefSeq	ILMN_236865	ILMN_236865	PALLD	NM_001081390.1	NM_001081390.1		72333	124487060	NM_001081390.1	Palld	NP_001074859.1	ILMN_3092653	004390193	A	3283	TGGAGAAGCTACAGAACACGGGGGTTGCTGATGGATACCCAGTGCGGCTG	8	-	63994751-63994800	8qB3.1	Mus musculus palladin, cytoskeletal associated protein (Palld), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence ISS]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	MGC150248; 6030492A02; 2410003B16Rik	MGC150248; 6030492A02; 2410003B16Rik
Mus musculus	RefSeq	ILMN_199992	ILMN_241175	LOC664837	XM_973329.1	XM_973329.1		664837	94374621	XM_973329.1	LOC664837	XP_978423.1	ILMN_2537209	007200128	S	550	CAGCAGGAGAGCAAGGAAATACAGGCTGATTGGGCCATCATTCACCAACT	5	+	26587686-26587735	5qB1	PREDICTED: Mus musculus hypothetical LOC664837, transcript variant 2 (LOC664837), mRNA.					
Mus musculus	RefSeq	ILMN_186672	ILMN_259247	SLIT2	NM_178804.2	NM_178804.2		20563	30794373	NM_178804.2	Slit2	NP_848919.2	ILMN_1253797	000430408	S	5784	GTTCTGTTGGCTGACCTTGATGTCTGACCATTGATGCCACTGAACTGTGG	5	+	48696451-48696500	5qB3	Mus musculus slit homolog 2 (Drosophila) (Slit2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	mKIAA4141; E030015M03Rik; Slil3; E130320P19Rik; Drad-1; KIAA4141	mKIAA4141; E030015M03Rik; Slil3; E130320P19Rik; Drad-1; KIAA4141
Mus musculus	MEEBO	ILMN_224088	ILMN_224088	6430502M16RIK	scl44535.5.1_4				31341946	NM_175455	6430502M16Rik		ILMN_2774546	002940609	S	2505	TGTGGACACTTTATGTCAACAAGGTTGTAGTTTTTCATGTTGCCAAAATC										
Mus musculus	MEEBO	ILMN_192394	ILMN_192394	4933417C16RIK	scl40820.1.5_0				27369797	NM_172568	4933417C16Rik		ILMN_2487685	005560050	S	13	GCCTGGCACCCTAGGACTGCGTGTCCTGAATAGCAAACTGGTTTTCCTAG										
Mus musculus	MEEBO	ILMN_192394	ILMN_192394	4933417C16RIK	scl40820.1.5_0				27369797	NM_172568	4933417C16Rik		ILMN_2625670	000130468	S	1633	GCCTCCGCCCACCCTGAGTGGAATGGAGCCATGCATTCAGTAAACTGACT										
Mus musculus	MEEBO	ILMN_192394	ILMN_192394	4933417C16RIK	scl40820.1.5_0				27369797	NM_172568	4933417C16Rik		ILMN_1228138	006510300	S	1337	GGGTCATCTAGCAAGGGAGCTGGTCGTGGAGTGCGGCAGAGACCTCTCCA										
Mus musculus	RefSeq	ILMN_212288	ILMN_229182	OLFR631	NM_146959.2	NM_146959.2		258961	116089293	NM_146959.2	Olfr631	NP_667170.2	ILMN_2624761	000430315	S	1165	CCCATGATGGGACTGTCCCTGGTACACCGCTTTGGGAAACATGCTCCACC	7	+	111078101-111078150	7qE3	Mus musculus olfactory receptor 631 (Olfr631), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR3-1	MOR3-1
Mus musculus	Riken	ILMN_204041	ILMN_204041	A830048E23RIK	ri|A830048E23|PX00155A06|AK043900|2791					AK043900	A830048E23Rik		ILMN_2561912	001990162	S	2584	TCGGGATGCAAAAATGGCTGGTGGATAGACAAAGCGGGGAGTACCCCAGG										
Mus musculus	RefSeq	ILMN_197320	ILMN_228251	LOC218668	XM_983372.1	XM_983372.1		218668	94396443	XM_983372.1	LOC218668	XP_988466.1	ILMN_1231723	004220403	S	214	GCTGCTGGTACCATCCAGGAAGAACACCTGAGAGATCTGCTGAGTACCAC				13qD2.3	PREDICTED: Mus musculus gene model 280, (NCBI) (LOC218668), mRNA.					
Mus musculus	MEEBO	ILMN_211241	ILMN_211241	SHHRS	scl29298.3_504				51711793	XM_489124	Shhrs		ILMN_1233149	000020619	S	4243	GGCTGTCTTTCCTTTACTGCCACCCAGGAGCATCGTGTGAACAATATGGC										
Mus musculus	MEEBO	ILMN_190182	ILMN_190182	A130049L09RIK	scl12080.1.1_233						A130049L09Rik		ILMN_1250926	007050132	S	15	CCTTTGGGGGGCATGCCTCTTGTAGAACTGATATCCCTTTAGAGACTTTA										
Mus musculus	RefSeq	ILMN_187058	ILMN_230769	SND1	NM_019776.2	NM_019776.2		56463	77404391	NM_019776.2	Snd1	NP_062750.2	ILMN_2440803	001980242	S	2937	GCTACAGTCGCTAAGGAGAACTTGCCTGGCCCCCAGCACCGCTGATGCCA	6	+	28838287-28838300:28838301-28838336	6qA3.3	Mus musculus staphylococcal nuclease and tudor domain containing 1 (Snd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation [goid 16442] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which double-stranded RNAs silence cognate genes. Involves posttranscriptional gene inactivation ('silencing') both of transgenes or dsRNA introduced into a germline, and of the host gene(s) homologous to the transgenes or dsRNA. This silencing is triggered by the introduction of transgenes or double-stranded RNA (dsRNA), and occurs through a specific decrease in the level of mRNA of both host genes and transgenes [goid 16246] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AL033314	AL033314
Mus musculus	RefSeq	ILMN_196816	ILMN_196816	LOC237504	XM_137219.1	XM_137219.1			20865645	XM_137219.1	LOC237504		ILMN_1224730	006270576	S	2	TGGCTAGTGTGTGGCCACTGATATGTAAACTAGAAGTGCTACTACACAGG										
Mus musculus	RefSeq	ILMN_223769	ILMN_315677	4930444P10RIK	XM_001475855.1	XM_001475855.1		75799	149233694	XM_001475855.1	4930444P10Rik	XP_001475905.1	ILMN_1231199	000110446	S	996	TGTGATATACATACAAATGAAATGTAAATAGCAAATAAATATTTTATGTT				1qA3	PREDICTED: Mus musculus RIKEN cDNA 4930444P10 gene (4930444P10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212445	ILMN_212445	SSR2	NM_025448.2	NM_025448.2		66256	31980613	NM_025448.2	Ssr2	NP_079724.1	ILMN_2833606	007610494	S	840	GGCCCTTGGCCCGTGGCTATTTTGTCCTGAATCTTACCCCGAACTCAACC	3	+	88673997-88674046	3qF1	Mus musculus signal sequence receptor, beta (Ssr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			AI315033; AU020133; 1500032E05Rik; TRAPB; TRAPbeta; TLAP	AI315033; AU020133; 1500032E05Rik; TRAPB; TRAPbeta; TLAP
Mus musculus	Riken	ILMN_203116	ILMN_203116	PTDSS2	ri|6330442L20|PX00009C18|AK031906|2119					AK031906	Ptdss2		ILMN_1228451	004260328	S	1937	CAGGAAACAAGCCTCCGCTCCTGTCTGGGAGCCTCAGCAATGTGTATGGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 6659] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: CDP-diacylglycerol + L-serine = CMP + O-sn-phosphatidyl-L-serine [goid 3882] [evidence IMP]		
Mus musculus	Riken	ILMN_206259	ILMN_206259	C920030L09RIK	ri|C920030L09|PX00179A24|AK083397|3915					AK083397	C920030L09Rik		ILMN_1253755	003610309	S	3535	CTGATACCTCAGGTCAACTCTGCTCGTTCAGTCCCTGCTTTCTCTGGACC										
Mus musculus	RefSeq	ILMN_221282	ILMN_225739	OLFR557	NM_146361.1	NM_146361.1		258358	22129580	NM_146361.1	Olfr557	NP_666473.1	ILMN_2733435	006580082	S	621	CGTTTATGGGCTCTTCATCATCCTATCAGTCATGGGTGTGGACTCCCTCT	7	+	109847374-109847423	7qE3	Mus musculus olfactory receptor 557 (Olfr557), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR18-3	MOR18-3
Mus musculus	RefSeq	ILMN_214521	ILMN_214521	RAD50	NM_009012.2	NM_009012.2		19360	153945821	NM_009012.2	Rad50	NP_033038.2	ILMN_1257398	004850037	S	651	CAGCTCCAAATGTGCAGAAATCGACAGAGAAATGATAAGTTGTCTTGGGG				11qB1.3	Mus musculus RAD50 homolog (S. cerevisiae) (Rad50), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Trimeric protein complex that possesses endonuclease activity; involved in DNA repair and checkpoint signaling. In Saccharomyces the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins related to the Saccharomyces proteins [goid 30870] [evidence IEA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]	Rad50l; Mrell	Rad50l; Mrell
Mus musculus	RefSeq	ILMN_214521	ILMN_214521	RAD50	NM_009012.2	NM_009012.2		19360	153945821	NM_009012.2	Rad50	NP_033038.2	ILMN_2702087	005670458	S	4345	CATTTCCTGCCAACTGAATGTCATCCAGATAAACAGTGCTGACAGGAGGG				11qB1.3	Mus musculus RAD50 homolog (S. cerevisiae) (Rad50), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Trimeric protein complex that possesses endonuclease activity; involved in DNA repair and checkpoint signaling. In Saccharomyces the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins related to the Saccharomyces proteins [goid 30870] [evidence IEA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]	Rad50l; Mrell	Rad50l; Mrell
Mus musculus	Riken	ILMN_207008	ILMN_207008	PSCD1	ri|6820419M03|PX00649N10|AK078502|1592					AK078502	Pscd1		ILMN_1248727	005130196	S	1363	ACCACAAGAGGGAGAAATTGACCGATGGAGGAGGAGGCGCAGAGGTGCAG										
Mus musculus	RefSeq	ILMN_210765	ILMN_234573	GA_X5J8B7W2BV0-3116-4045	NM_146263.1	NM_146263.1		257663	22128628	NM_146263.1	GA_x5J8B7W2BV0-3116-4045	NP_666375.1	ILMN_1219722	004070221	S	796	GACAAGATGGTAACTGTGTTCTACACCGTGATAACTCCCCTCCTCAACCC	2	+	90241615-90241664	2qE1	Mus musculus olfactory receptor GA_x5J8B7W2BV0-3116-4045 (GA_x5J8B7W2BV0-3116-4045), mRNA.					
Mus musculus	RefSeq	ILMN_200956	ILMN_200956	LOC385520	XM_358267.1	XM_358267.1			38087348	XM_358267.1	LOC385520		ILMN_2540598	002810324	S	1079	TTCCAGTGATACTGCCAAGTAACCTTACCTCATCCTTTGTCAGCTGCCCC										
Mus musculus	RefSeq	ILMN_212367	ILMN_212367	STARD10	NM_019990.4	NM_019990.4		56018	150456475	NM_019990.4	Stard10	NP_064374.1	ILMN_2759762	007570209	S	902	TGTCGGTGCAACATGCAGACTCACTGGAGAACATCGATGAGAGTGCAGTG				7qE3	Mus musculus START domain containing 10 (Stard10), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]			PC-TP2; PCTP2; TISP-81; NY-C0-28; Sdccag28; Pctpl; CGI-52; SdccagG28; AV048538	PC-TP2; PCTP2; TISP-81; NY-C0-28; Sdccag28; Pctpl; CGI-52; SdccagG28; AV048538
Mus musculus	RefSeq	ILMN_212367	ILMN_212367	STARD10	NM_019990.4	NM_019990.4		56018	150456475	NM_019990.4	Stard10	NP_064374.1	ILMN_2625601	001940612	S	148	ATGGAAAAGCCAGCTGCCTCAACAGAACCCCAAGGGTCTCGGCCCGCCTT				7qE3	Mus musculus START domain containing 10 (Stard10), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]			PC-TP2; PCTP2; TISP-81; NY-C0-28; Sdccag28; Pctpl; CGI-52; SdccagG28; AV048538	PC-TP2; PCTP2; TISP-81; NY-C0-28; Sdccag28; Pctpl; CGI-52; SdccagG28; AV048538
Mus musculus	RefSeq	ILMN_221171	ILMN_258027	ZFP827	NM_178267.3	NM_178267.3		622675	124358943	NM_178267.3	Zfp827	NP_839998.2	ILMN_2731871	005570451	S	6948	TGCTTAATGTAATTGGGCAACTTTTTTAGCACTTTGGAAAGAGTCACCAA	8	+	81717009-81717058	8qC1-qC2	Mus musculus zinc finger protein 827 (Zfp827), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2810449M09Rik	2810449M09Rik
Mus musculus	RefSeq	ILMN_218530	ILMN_236683	2210016F16RIK	XM_916662.2	XM_916662.2		70153	94394931	XM_916662.2	2210016F16Rik	XP_921755.1	ILMN_1238628	002320672	S	3338	GTGCGTTCCTATAATCATACTGCGTATCCTTCAGCGATCATGTCCATGTC					PREDICTED: Mus musculus RIKEN cDNA 2210016F16 gene (2210016F16Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_194278	ILMN_241812	PAX6	NM_013627.4	NM_013627.4		18508	146134521	NM_013627.4	Pax6	NP_038655.1	ILMN_2612187	007320682	S	2402	GATATGAATTCAAGGAGAAGTTGATAGCTAAAAGGTAGAGTGTGTCTTCG				2qE3	Mus musculus paired box gene 6 (Pax6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The establishment, maintenance and elaboration of the dorsal/ventral axis [goid 9950] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The commitment of neuronal precursor cells to become specialized types of neurons in the forebrain [goid 21902] [evidence IMP]; The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain [goid 21798] [evidence IMP]; The process whose specific outcome is the progression of the pallium over time, from its formation to the mature structure. The pallium is the roof region of the telencephalon [goid 21543] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation [goid 30858] [evidence IMP]; The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain [goid 21797] [evidence IMP]; The process whose specific outcome is the creation of the forebrain-midbrain boundary [goid 21905] [evidence IMP]; A process by which a protein is transported to, or maintained in, a location within an organelle [goid 33365] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that modulates the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50767] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Pax-6; Sey; Gsfaey11; 1500038E17Rik; AEY11; Dey	Pax-6; Sey; Gsfaey11; 1500038E17Rik; AEY11; Dey
Mus musculus	RefSeq	ILMN_210647	ILMN_210647	ISY1	NM_133934.2	NM_133934.2		57905	31711994	NM_133934.2	Isy1	NP_598695.1	ILMN_2828838	005260195	S	1470	CGTCTGGGCACTGCTTACCTTGCCATGATCCCCCTCTGGGAGAGCCATTT	6	-	87784188-87784237	6qD1	Mus musculus ISY1 splicing factor homolog (S. cerevisiae) (Isy1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		5830446M03Rik; AI181014; AU020769	5830446M03Rik; AI181014; AU020769
Mus musculus	RefSeq	ILMN_188376	ILMN_317138	LOC100043982	XM_001473299.1	XM_001473299.1		100043982	149262588	XM_001473299.1	LOC100043982	XP_001473349.1	ILMN_2758662	004200156	S	2801	CGTACAAAAATAGTAGGCAGACTGCTTAATGGTTGGGGTTTTTTCACAAT	11	-	104192295-104192344		PREDICTED: Mus musculus hypothetical protein LOC100043982 (LOC100043982), mRNA.					
Mus musculus	RefSeq	ILMN_188376	ILMN_317138	LOC100043982	XM_001473299.1	XM_001473299.1		100043982	149262588	XM_001473299.1	LOC100043982	XP_001473349.1	ILMN_1225380	001050561	S	790	CCGCCACCTGTGCATGACCCCACCCACAGCAAAATGAGATTGCGAGATCA	11	-	104201102-104201151		PREDICTED: Mus musculus hypothetical protein LOC100043982 (LOC100043982), mRNA.					
Mus musculus	RefSeq	ILMN_247449	ILMN_247449	ZFP187	NM_001013786.1	NM_001013786.1		432731	63003920	NM_001013786.1	Zfp187	NP_001013808.1	ILMN_3067831	006860408	I	3294	GCGTGTGATCAGTCTCCTTCATGTTTAACTCCGATCCACACCAAACGTGC	13	-	21534512-21534561	13qA3.1	Mus musculus zinc finger protein 187 (Zfp187), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	BC068174	BC068174
Mus musculus	RefSeq	ILMN_190643	ILMN_247449	ZFP187	NM_001013786.1	NM_001013786.1		432731	63003920	NM_001013786.1	Zfp187	NP_001013808.1	ILMN_1225038	002480397	S	362	CAGGCCTGAGTTCTGAACAAGTCTCTCCTTAGTTTCCAAGCATTGGCTGT	13	-	21537444-21537465:21537466-21537493	13qA3.1	Mus musculus zinc finger protein 187 (Zfp187), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	BC068174	BC068174
Mus musculus	RefSeq	ILMN_247449	ILMN_247449	ZFP187	NM_001013786.1	NM_001013786.1		432731	63003920	NM_001013786.1	Zfp187	NP_001013808.1	ILMN_3145975	004070397	A	759	CTCCTCACCCACCATCAGAGAGTCCATGGTCGTTCCAAAAGACATCACTG	13	-	21537047-21537096	13qA3.1	Mus musculus zinc finger protein 187 (Zfp187), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	BC068174	BC068174
Mus musculus	RefSeq	ILMN_212225	ILMN_212225	NSUN2	NM_145354.3	NM_145354.3		28114	141802364	NM_145354.3	Nsun2	NP_663329.2	ILMN_2624176	002650504	S	3970	CGGGTGGCAATCCTGGGTGCCATTCATGCTGTGTGCTTTTCCCTTGGGTT	13	+	69774464-69774513	13qC1	Mus musculus NOL1/NOP2/Sun domain family member 2 (Nsun2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine [goid 16428] [evidence IEA]	D13Wsu123e; Misu	D13Wsu123e; Misu
Mus musculus	MEEBO	ILMN_219067	ILMN_219067	6720416L17RIK	scl0399588.1_165	NM_207266.1			46402280	NM_207266.1	6720416L17Rik		ILMN_1235407	001850025	S	1868	GCTCCCTTCTATAGAAGTGGGTGTAAGTGCTCGACCCTTCCTAGAGCCAC										
Mus musculus	RefSeq	ILMN_191783	ILMN_313266	CYPT12	XM_001473744.1	XM_001473744.1		75439	149250903	XM_001473744.1	Cypt12	XP_001473794.1	ILMN_2482150	002350671	S	146	CGAAGGTGCAAGAACTCCAACAAGAACCAACGTGCTTCGCGTCGTCGCAA				3qA1	PREDICTED: Mus musculus cysteine-rich perinuclear theca 12 (Cypt12), mRNA.					
Mus musculus	RefSeq	ILMN_215531	ILMN_215531	PRDX1	NM_011034.2	NM_011034.2		18477	31981584	NM_011034.2	Prdx1	NP_035164.1	ILMN_2989706	000290343	S	1177	GAGACAGGATCTCTCACTGATCTAGAACTTGATGTATATGTGAGGCTAGT	4	+	116197692-116197741	4qD1	Mus musculus peroxiredoxin 1 (Prdx1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; Any process that modulates the frequency, rate or extent of the transfer of NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters, from the cytoplasm into the nucleus, across the nuclear membrane [goid 42345] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors [goid 42267] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process of regulating the production and elimination of erythrocytes within an organism [goid 34101] [evidence IMP]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade [goid 32872] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence ISO]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence ISO]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	PrxI; MSP23; Tdpx2; PAG; OSF-3; Paga; TPx-A; TDX2; NkefA	PrxI; MSP23; Tdpx2; PAG; OSF-3; Paga; TPx-A; TDX2; NkefA
Mus musculus	RefSeq	ILMN_214719	ILMN_214719	LCK	NM_010693.1	NM_010693.1		16818	33859569	NM_010693.1	Lck	NP_034823.1	ILMN_2651137	001820541	S	1801	GTGCACACATGGACTCTGACTCTGTACATGAAACCTGTGCGTGTGTCACA	4	-	129050968-129051017	4qD2.2	Mus musculus lymphocyte protein tyrosine kinase (Lck), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50856] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation [goid 45588] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]	Hck-3; p56<lck>	Hck-3; p56<lck>
Mus musculus	RefSeq	ILMN_184592	ILMN_184592	DNAJC30	NM_025362.3	NM_025362.3		66114	125988406	NM_025362.3	Dnajc30	NP_079638.2	ILMN_2465068	005260561	S	994	GCCAACTCCCAGAACACTTGCTGCGGTTTTAACCAGAAGCCCTGAGCAAG	5	+	135541069-135541118	5qG2	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 30 (Dnajc30), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	1300007M11Rik	1300007M11Rik
Mus musculus	RefSeq	ILMN_184592	ILMN_184592	DNAJC30	NM_025362.3	NM_025362.3		66114	125988406	NM_025362.3	Dnajc30	NP_079638.2	ILMN_1246587	004560523	S	14	CTGCCTCGGCGCCGCCCCCTCCCAGCCACAACATGGCGGCCGCGCGCTGC	5	+	135540089-135540120:135540121-135540138	5qG2	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 30 (Dnajc30), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	1300007M11Rik	1300007M11Rik
Mus musculus	RefSeq	ILMN_190833	ILMN_252116	1700041B20RIK	XM_485065.3	XM_485065.3		73338	94367223	XM_485065.3	1700041B20Rik	XP_485065.3	ILMN_2737831	004590181	S	1582	GGTAACACCTACCTGCCCCTGACCATACCCATTCCTAAGGCATTTCGGAA	2	-	126966425-126966474	2qF1	PREDICTED: Mus musculus RIKEN cDNA 1700041B20 gene, transcript variant 1 (1700041B20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215099	ILMN_312485	LOC100048583	XM_001480717.1	XM_001480717.1		100048583	149241500	XM_001480717.1	LOC100048583	XP_001480767.1	ILMN_1224389	001710196	S	554	GGTCAAGATGAACTCAGTTCCTCCGAATCTCTTTTCATCAATAAAGAATC					PREDICTED: Mus musculus similar to interferon-inducible protein 203, transcript variant 1 (LOC100048583), mRNA.					
Mus musculus	RefSeq	ILMN_199321	ILMN_312485	LOC100048583	XM_001480717.1	XM_001480717.1		100048583	149241500	XM_001480717.1	LOC100048583	XP_001480767.1	ILMN_1246834	002320349	S	2147	GGGCTTTCAGAAACAATACACAGAAGTCCATCCAGCGCACCAAGGAGAGG					PREDICTED: Mus musculus similar to interferon-inducible protein 203, transcript variant 1 (LOC100048583), mRNA.					
Mus musculus	RefSeq	ILMN_185543	ILMN_255895	TRPM3	NM_001035240.2	NM_001035240.2		226025	95147344	NM_001035240.2	Trpm3	NP_001030317.1	ILMN_2427909	006060253	S	3523	ATGTGTGCTGCCGGTGGAGGAAGCATGAGAGTGACCAGGACGAAAGGGAC	19	+	23053186-23053235	19qB	Mus musculus transient receptor potential cation channel, subfamily M, member 3 (Trpm3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence ISA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISA]	MLSN2; LTRPC3; 6330504P12Rik; AU018608; B930001P07Rik; 9330180E14	MLSN2; LTRPC3; 6330504P12Rik; AU018608; B930001P07Rik; 9330180E14
Mus musculus	RefSeq	ILMN_185543	ILMN_255895	TRPM3	NM_001035240.2	NM_001035240.2		226025	95147344	NM_001035240.2	Trpm3	NP_001030317.1	ILMN_2508109	002260600	S	6397	CCATAAATAACCTTAGATTTGAGTAGGGGCTTGATAGCAACCCAAACCCA	19	+	23064027-23064076	19qB	Mus musculus transient receptor potential cation channel, subfamily M, member 3 (Trpm3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence ISA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISA]	MLSN2; LTRPC3; 6330504P12Rik; AU018608; B930001P07Rik; 9330180E14	MLSN2; LTRPC3; 6330504P12Rik; AU018608; B930001P07Rik; 9330180E14
Mus musculus	RefSeq	ILMN_185543	ILMN_255895	TRPM3	NM_001035240.2	NM_001035240.2		226025	95147344	NM_001035240.2	Trpm3	NP_001030317.1	ILMN_2462222	005910689	S	1049	TTTGGAATACCTTCGAGACACCCCTCCTGTACCAGTCGTGGTCTGTGATG	19	+	22841191-22841240	19qB	Mus musculus transient receptor potential cation channel, subfamily M, member 3 (Trpm3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence ISA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISA]	MLSN2; LTRPC3; 6330504P12Rik; AU018608; B930001P07Rik; 9330180E14	MLSN2; LTRPC3; 6330504P12Rik; AU018608; B930001P07Rik; 9330180E14
Mus musculus	RefSeq	ILMN_212767	ILMN_212767	CAR3	NM_007606.3	NM_007606.3		12350	118131196	NM_007606.3	Car3	NP_031632.2	ILMN_2630047	001450242	S	190	CCCTGGCTCTGCTAAGACCATCCTGAACAATGGGAAGACCTGCAGAGTTG	3	+	14864371-14864420	3qA1	Mus musculus carbonic anhydrase 3 (Car3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Interacting selectively with nickel (Ni) ions [goid 16151] [evidence IDA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	Car-3; BB219044	Car-3; BB219044
Mus musculus	RefSeq	ILMN_192790	ILMN_238887	MERTK	XM_986663.1	XM_986663.1		17289	94368722	XM_986663.1	Mertk	XP_991757.1	ILMN_2491355	003440551	S	4209	CTGACCTTGCAGAACTCAAAATGTATCCCTCAGTGTTAACATTTGTACAG				2qF1	PREDICTED: Mus musculus c-mer proto-oncogene tyrosine kinase (Mertk), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220286	ILMN_220286	EPS8L1	NM_026146.3	NM_026146.3		67425	142373594	NM_026146.3	Eps8l1	NP_080422.1	ILMN_2720150	007400707	S	2224	AAAAGTGATGAGACGATGGGGTTCCCAGCGCCCCGTAGGACAACAGTCGC	7	+	4430546-4430595	7qA1	Mus musculus EPS8-like 1 (Eps8l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISA]	A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISA]	DRC3; 2310051G19Rik; 4632407K17Rik; EPS8R1; AW060268	DRC3; 2310051G19Rik; 4632407K17Rik; EPS8R1; AW060268
Mus musculus	RefSeq	ILMN_189102	ILMN_189102	TRIM44	NM_020267.2	NM_020267.2		80985	68989253	NM_020267.2	Trim44	NP_064663.2	ILMN_2471289	002120114	S	1318	GGCTTCTGATATCTGTGAAAGCTGCCAGGCAACAAACTTCTTCTACTGGA	2	-	102144520-102144569	2qE2	Mus musculus tripartite motif-containing 44 (Trim44), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Mc7; MGC102054; Dipb	Mc7; MGC102054; Dipb
Mus musculus	RefSeq	ILMN_189102	ILMN_189102	TRIM44	NM_020267.2	NM_020267.2		80985	68989253	NM_020267.2	Trim44	NP_064663.2	ILMN_1231217	005270274	S	1338	GCTGCCAGGCAACAAACTTCTTCTACTGGAAATGTCCCCAGATCCACAGC	2	-	102144500-102144549	2qE2	Mus musculus tripartite motif-containing 44 (Trim44), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Mc7; MGC102054; Dipb	Mc7; MGC102054; Dipb
Mus musculus	RefSeq	ILMN_194582	ILMN_260617	LPIN1	NM_015763.3	NM_015763.3		14245	68510035	NM_015763.3	Lpin1	NP_056578.2	ILMN_2738580	007320468	S	744	TTGCCAGAGGACTCCCCCTCACCTGGCCGAGGGAGTTCTCTCTAGCTCTT	12	-	16578006-16578055	12qA1.1	Mus musculus lipin 1 (Lpin1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; Any process that modulates the frequency, rate or extent of adipocyte differentiation [goid 45598] [evidence IMP]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell [goid 31529] [evidence IMP]	Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]	fld; 4631420P06; Kiaa0188; mKIAA0188	fld; 4631420P06; Kiaa0188; mKIAA0188
Mus musculus	Riken	ILMN_204862	ILMN_204862	SLAM	ri|A130049E03|PX00124M04|AK037780|1667					AK037780	Slam		ILMN_2568187	006380343	S	1324	ATACTGGCCTGATCCAAATAAAGGCATCTGCAGAGTACAGTCAGGAACAG										
Mus musculus	RefSeq	ILMN_213865	ILMN_252845	ALS2CL	NM_146228.3	NM_146228.3		235633	53749673	NM_146228.3	Als2cl	NP_666340.2	ILMN_1240592	006380112	S	3411	GGCTCCGTTCCGTTCTTTGGACCTAAATGGACATTCTCATGTCAGCGTTC	9	+	110801360-110801409	9qF3	Mus musculus ALS2 C-terminal like (Als2cl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence ISA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence ISO]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rab family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 17112] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISO]	BC022645; 79H19D; mRn.49018; D930044G19Rik; 79H19E	BC022645; 79H19D; mRn.49018; D930044G19Rik; 79H19E
Mus musculus	RefSeq	ILMN_252845	ILMN_252845	ALS2CL	NM_146228.3	NM_146228.3		235633	53749673	NM_146228.3	Als2cl	NP_666340.2	ILMN_2820112	000020128	S	4629	CCAGCAGGTATAGCCAAGAAATAAGAGAATCATCAGGGGCTGGAGAGATG	9	+	110802578-110802627	9qF3	Mus musculus ALS2 C-terminal like (Als2cl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence ISA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence ISO]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rab family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 17112] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISO]	BC022645; 79H19D; mRn.49018; D930044G19Rik; 79H19E	BC022645; 79H19D; mRn.49018; D930044G19Rik; 79H19E
Mus musculus	MEEBO	ILMN_194208	ILMN_194208	MR1	scl16123.5_190				31982307	NM_008209	Mr1		ILMN_2504374	004260292	S	18	TCCATAATTGGAGAATGGAGTGGGTTAGGAGGGAAGCAGTTTGAAGAGCC						A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]			
Mus musculus	Riken	ILMN_202844	ILMN_202844	9130227N12RIK	ri|9130227N12|PX00061B23|AK033707|1811					AK033707	9130227N12Rik		ILMN_1236445	001850619	S	1675	AGCTCTTAAGGGGCCAGGGGAGAATCTAGTGTGGTCTAAGTCGGACCTGG										
Mus musculus	RefSeq	ILMN_200082	ILMN_200082	LOC385742	XM_358927.1	XM_358927.1			38080272	XM_358927.1	LOC385742		ILMN_2537528	000610168	S	56	TGGAGCTGCTTCTGAGTGTTGTGGGGCTGGGTGAAGAGTTTGCGCCCAAG										
Mus musculus	RefSeq	ILMN_211201	ILMN_211201	1700010D01RIK	NM_029590.2	NM_029590.2		76386	142364117	NM_029590.2	1700010D01Rik	NP_083866.1	ILMN_1250734	000020368	S	206	GCTGAGCCAAAGATAGTGAAGATTTGCCTTCATCAGTTCCAGTCCAAATG	X	-	92928345-92928394	XqC3	Mus musculus RIKEN cDNA 1700010D01 gene (1700010D01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198148	ILMN_198148	LOC208285	XM_139863.3	XM_139863.3			38082160	XM_139863.3	LOC208285		ILMN_1219922	006590184	S	1386	GGTGGCTCCTGATGGTCCCCAAGGGGGCAGCACTGACTTTTTTCTTGTCC										
Mus musculus	RefSeq	ILMN_187570	ILMN_258324	KRT36	NM_008472.2	NM_008472.2		16673	141803029	NM_008472.2	Krt36	NP_032498.1	ILMN_2445249	005270075	S	3547	CTGGTCTTAACTGTGCTTTTTACGCCATGCAAAACCAGGTTCCCCTGGAA	11	-	99963359-99963408	11qD	Mus musculus keratin 36 (Krt36), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			HRa-1; Krt1-5; Krt1-22	HRa-1; Krt1-5; Krt1-22
Mus musculus	MEEBO	ILMN_191740	ILMN_191740	4930529H12RIK	scl0075204.1_11						4930529H12Rik		ILMN_1237486	004210450	S	15	GGCACTGCACAGGATCCCCCTTTTTCCCTCCTCCCACTGGCAAGAGTCTC										
Mus musculus	Riken	ILMN_204580	ILMN_204580	C130041A08RIK	ri|C130041A08|PX00168J24|AK048221|1375					AK048221	C130041A08Rik		ILMN_2566080	006480139	S	666	AGATCAGGACCCAAGTGGACAAGAAAGTTGTGGAGGCTGAGGGCACCATG										
Mus musculus	RefSeq	ILMN_246754	ILMN_246754	BICD2	NM_001039180.1	NM_001039180.1		76895	85702358	NM_001039180.1	Bicd2	NP_001034269.1	ILMN_3119245	005810181	A	3971	TCCTTGCTAAGTGAGGTTCAGGGTGTGGTCAAATTGGTACTAGTGGAGGG	13	+	49481835-49481884	13qA5	Mus musculus bicaudal D homolog 2 (Drosophila) (Bicd2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA0699; 1110005D12Rik; 0610027D24Rik; AA408834; mKIAA0699	KIAA0699; 1110005D12Rik; 0610027D24Rik; AA408834; mKIAA0699
Mus musculus	RefSeq	ILMN_200271	ILMN_200271	LOC386118	XM_359076.1	XM_359076.1			38081163	XM_359076.1	LOC386118		ILMN_1252380	006370408	S	573	CGGCTGTCTGGAGCCGAAGATGGTGCCACCCAACCACAGGTTTTCTATAC										
Mus musculus	RefSeq	ILMN_201471	ILMN_326829	LOC673556	XM_001475653.1	XM_001475653.1		673556	149247774	XM_001475653.1	LOC673556	XP_001475703.1	ILMN_1234106	002900184	S	279	CGGTGGGCGGTGCCGTTATCATCTTCCAACACTTGCCTAATTATGGAGCT	1|NT_166281.1	+	76408-76447:76448-76457		PREDICTED: Mus musculus hypothetical LOC673556 (LOC673556), mRNA.					
Mus musculus	RefSeq	ILMN_199373	ILMN_199373	MPV17	NM_008622.3	NM_008622.3		17527	145966706	NM_008622.3	Mpv17	NP_032648.1	ILMN_1242903	001190162	S	975	GACATTTATAATATTGCTGTCACTCTGGCCCTTAGCTGATGGGGACACAC				5qB1	Mus musculus Mpv17 transgene, kidney disease mutant (Mpv17), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IDA]		Tg.Mpv17	Tg.Mpv17
Mus musculus	RefSeq	ILMN_199373	ILMN_199373	MPV17	NM_008622.3	NM_008622.3		17527	145966706	NM_008622.3	Mpv17	NP_032648.1	ILMN_2626383	001110400	S	361	CCCACTGGTCGGGATACTCAATGGAATGTCAGCCCAGGACAATTGGGCCA				5qB1	Mus musculus Mpv17 transgene, kidney disease mutant (Mpv17), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IDA]		Tg.Mpv17	Tg.Mpv17
Mus musculus	RefSeq	ILMN_199373	ILMN_199373	MPV17	NM_008622.3	NM_008622.3		17527	145966706	NM_008622.3	Mpv17	NP_032648.1	ILMN_1236320	006040497	S	905	CCATGCTATGGGGTTGCTGATCAGAATAGGGTGACCACTCTGAAGTGGCA				5qB1	Mus musculus Mpv17 transgene, kidney disease mutant (Mpv17), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IDA]		Tg.Mpv17	Tg.Mpv17
Mus musculus	RefSeq	ILMN_199373	ILMN_199373	MPV17	NM_008622.3	NM_008622.3		17527	145966706	NM_008622.3	Mpv17	NP_032648.1	ILMN_2657857	004260053	S	248	GGCTGGTACAAAGTTTTAGACCACTTAATCCCGGGCACCACGAAGGTGCA				5qB1	Mus musculus Mpv17 transgene, kidney disease mutant (Mpv17), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IDA]		Tg.Mpv17	Tg.Mpv17
Mus musculus	Riken	ILMN_204899	ILMN_204899	SLC6A6	ri|A530085H09|PX00143G02|AK041141|1291					AK041141	Slc6a6		ILMN_1252493	000780521	S	931	CTCTGTGATTGTGGCATACCCTGTTTCTGGAGGGAAGGAGGACACACAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of taurine into, out of, within or between cells [goid 15734] [evidence IDA]; The directed movement of taurine into, out of, within or between cells [goid 15734] [evidence IMP]; The directed movement of beta-alanine, 3-aminopropanoic acid, into, out of, within or between cells [goid 1762] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: taurine(out) + Na+(out) = taurine(in) + Na+(in) [goid 5369] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of taurine from one side of the membrane to the other. Taurine (2-aminoethanesulfonic acid) is a sulphur-containing amino acid derivative which is important in the metabolism of fats [goid 5368] [evidence IDA]; Catalysis of the transfer of beta-alanine from one side of a membrane to the other. Beta-alanine is 3-aminopropanoic acid [goid 1761] [evidence IDA]		
Mus musculus	MEEBO	ILMN_214462	ILMN_214462	KARS	scl000621.1_0				23270694	BC035324	Kars		ILMN_2648230	002710711	S	67	TCAGTAGTTCCAGGGTGTTCCGCCATGTTGATGCAAGCTGCTGTCAGGCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling lysine to lysyl-tRNA, catalyzed by lysyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6430] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys) [goid 4824] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_231938	ILMN_231938	RPL19	NM_009078.1	NM_009078.1		19921	6677772	NM_009078.1	Rpl19	NP_033104.1	ILMN_2869225	004900703	S	507	ACGAAAGCGCCGGGAGGAGCGCCTCCAGTCCAAGAAGGAAGAGATCATCA	11	+	97891624-97891673	11qD	Mus musculus ribosomal protein L19 (Rpl19), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IC ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IDA]		
Mus musculus	MEEBO	ILMN_189152	ILMN_189152	LZTFL1	scl6337.1.1_16				31543134	NM_033322	Lztfl1		ILMN_2466381	005220326	S	6	GGTCAGCCATTAAAGGTACCACAAAATCACCTGTTTATGTGAATTAATGA										
Mus musculus	RefSeq	ILMN_198755	ILMN_198755	EG236892	XM_141934.2	XM_141934.2		236892	94407645	XM_141934.2	EG236892	XP_141934.2	ILMN_1239030	003800288	S	547	GAGGATGCCTTTGCAGTGGAAGTGAGAGAAGTCAACTCCAGTCAGCCCTC	X	-	89325618-89325667	XqC2	PREDICTED: Mus musculus predicted gene, EG236892 (EG236892), mRNA.					
Mus musculus	RefSeq	ILMN_209971	ILMN_209971	HS3ST1	NM_010474.1	NM_010474.1		15476	6754245	NM_010474.1	Hs3st1	NP_034604.1	ILMN_1253182	004490445	S	1249	CTGGCACTGATTTGCCGTCTCCTAGGCTCGGGACTTTTCCTGTTGTTAAC	5	-	40005561-40005601:40005602-40005610	5qB3	Mus musculus heparan sulfate (glucosamine) 3-O-sulfotransferase 1 (Hs3st1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate, with a substrate consensus sequence of Glc(N2S>NAc)+/-6S GlcA GlcN2S*+/-6S GlcA>IdoA+/-2S Glc(N2S/NAc)+/-6S [goid 8467] [evidence IEA]	Hsg3ost; 3-OST; D5Wsu110e	Hsg3ost; 3-OST; D5Wsu110e
Mus musculus	RefSeq	ILMN_202172	ILMN_225989	LOC676226	XM_988292.1	XM_988292.1		676226	94393587	XM_988292.1	LOC676226	XP_993386.1	ILMN_1241775	007210671	S	533	AGGGTGTGCCCCTGACCCCCAAAGCTGACCTACTGACCACAGAGGAGATC					PREDICTED: Mus musculus similar to CG14535-PA (LOC676226), mRNA.					
Mus musculus	RefSeq	ILMN_197095	ILMN_197095	LOC380816	XM_358431.1	XM_358431.1			38073991	XM_358431.1	LOC380816		ILMN_1255876	001470440	S	756	GCGCGCACAGCCCGCAGGCAAGAGGCATGGTTACTACTGCTGCCAACAAT										
Mus musculus	Riken	ILMN_206433	ILMN_206433	C230048N02RIK	ri|C230048N02|PX00175G02|AK082420|2213					AK082420	C230048N02Rik		ILMN_1256691	002120239	S	1772	GGTGCTTGGCAGGGCCAGAGAAGGGCGTTAGGTATCCTTTGTTCCTCTGC										
Mus musculus	MEEBO	ILMN_190606	ILMN_190606	1110007H17RIK	scl073728.2_122				51317391	NM_028627	1110007H17Rik		ILMN_2471650	003310286	S	4	GGAGGCCTATCAAGTTCTGCTTCTGGTAGACCACCTCCCCTTACACCAGC										
Mus musculus	Riken	ILMN_205692	ILMN_205692	A430106D13RIK	ri|A430106D13|PX00064N18|AK040551|2271					AK040551	A430106D13Rik		ILMN_1220073	006350039	S	1904	GAGGATCAAACTTGGGCAGGCACTGTAATGGCTTGGTGTCTCTCTAGCTC										
Mus musculus	RefSeq	ILMN_195131	ILMN_195131	ZIM1	NM_011769.3	NM_011769.3		22776	42734480	NM_011769.3	Zim1	NP_035899.3	ILMN_2925884	001710477	S	3279	CACTGTGTAGCCCAGACTAGCCTCAAACTTGTGACATTCTCCTGCCCCGG	7	-	6628326-6628375	7qA1	Mus musculus zinc finger, imprinted 1 (Zim1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214242	ILMN_214242	TBRG3	scl0021378.1_114	NM_178871.2			31341103	NM_178871.2	Tbrg3		ILMN_1240109	003190561	S	2555	GTATCCCTAAATGTTGATTAAAATCCTCTTGTATATGTCAGGCCATTTGC										
Mus musculus	RefSeq	ILMN_197152	ILMN_197152	LOC380833	XM_354741.1	XM_354741.1			38074328	XM_354741.1	LOC380833		ILMN_2527101	002450433	S	1140	CCTGAGACATCAGCGGATCCATGGTGATAAAACTGCTCCAAAGCCTCTGC										
Mus musculus	Riken	ILMN_205740	ILMN_205740	CCKBR, GPCR	ri|A330095H04|PX00133D03|AK039721|1327					AK039721	CCKBR, GPCR		ILMN_1256800	005810711	S	1094	GGCCTCAGCCAGCTGTTCCAGAATCAAGAATGGAGTGGATCTATCATGGC										
Mus musculus	RefSeq	ILMN_201270	ILMN_201270	LOC382135	XM_358709.1	XM_358709.1			38090293	XM_358709.1	LOC382135		ILMN_1244029	006180095	S	1341	TGAGTCCCGGTCTCTGCACAAGGGGACCATACATCTGTCCACATGTCTAC										
Mus musculus	RefSeq	ILMN_216364	ILMN_216364	NAT5	NM_026425.2	NM_026425.2		67877	142348913	NM_026425.2	Nat5	NP_080701.1	ILMN_1223543	002340689	S	214	AGTACAGTACCACTAGTACTTTTTTGGTTATGGGCAAAGCAGAAGGCTCG	2	+	145734327-145734351:145737244-145737268	2qG1	Mus musculus N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) (Nat5), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	D2Ertd186e; MGC144325; AU041458; 1500004D14Rik; 2900026I01Rik	D2Ertd186e; MGC144325; AU041458; 1500004D14Rik; 2900026I01Rik
Mus musculus	MEEBO	ILMN_220699	ILMN_220699	2700078K21RIK	scl30477.6_12	NM_028308.1			20149309	NM_028308.1	2700078K21Rik		ILMN_2725493	001340750	S	1074	GGCTTTGAAAGGAGCACCTTGTGAGAGGTGTCTCCCCCTTATGGGGCTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198814	ILMN_198814	LOC243998	XM_112439.2	XM_112439.2			38087971	XM_112439.2	LOC243998		ILMN_1215870	001440435	S	3287	CAGTACCACACCCTCCTAAGAACCAGAAAGACAACATAAACCAAGGACCC										
Mus musculus	Riken	ILMN_206046	ILMN_206046	CLK4	ri|D030071D09|PX00182O11|AK051099|3355					AK051099	Clk4		ILMN_2577151	006560195	S	2897	GAAACTGCTTTACTGGTAGTTGGAAATAACTCAGGCAGGTCGCCTTGCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]		
Mus musculus	RefSeq	ILMN_216579	ILMN_216579	ABHD1	NM_021304.2	NM_021304.2		57742	15011863	NM_021304.2	Abhd1	NP_067279.2	ILMN_2672778	006040731	S	242	GGAGACTTTCTACCCGACACTGTGGTGCTTTGAGGGACGGCTGCAAACCA	5	+	31229530-31229579	5qB1	Mus musculus abhydrolase domain containing 1 (Abhd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	LABH-1; LABH1	LABH-1; LABH1
Mus musculus	RefSeq	ILMN_204540	ILMN_310496	LOC100040574	XM_001475024.1	XM_001475024.1		100040574	149254007	XM_001475024.1	LOC100040574	XP_001475074.1	ILMN_1250827	007000139	S	1332	GCCTAGCCAGCACCCAGGGGTTATTCTTGCATAGTAAGGTGTAAGAGCAA	5	+	92472544-92472593	5qE2	PREDICTED: Mus musculus hypothetical protein LOC100040574 (LOC100040574), mRNA.					
Mus musculus	MEEBO	ILMN_187950	ILMN_187950	SCL0002050.1_27	scl0002050.1_27	AY007702.1			10863860	AY007702.1	scl0002050.1_27		ILMN_2448530	005310291	S	20	TCCCCCAGCACGTCCTCAGCCGCCGAGGAGCCATCAGCTTCAGCTCCAGC										
Mus musculus	RefSeq	ILMN_228850	ILMN_228850	OTTMUSG00000008911	NM_001033791.1	NM_001033791.1		545677	85702112	NM_001033791.1	OTTMUSG00000008911	NP_001028963.1	ILMN_2927168	004540575	S	127	CCCACAACATCCATTGCACAAGACTACAGTAGACATCCTTATGATCGTGG	4	-	120817085-120817104:120822396-120822425	4qD2.2	Mus musculus predicted gene, OTTMUSG00000008911 (OTTMUSG00000008911), mRNA.					
Mus musculus	MEEBO	ILMN_190215	ILMN_190215	1700026D08RIK	scl31085.7_246				21312971	NM_029335	1700026D08Rik		ILMN_1248266	003440148	S	11	GGATTTGGGAGGGCATGTGCTCAAGTTTCAAGTTAAAGCTTGGCCTTGGG										
Mus musculus	MEEBO	ILMN_190215	ILMN_190215	1700026D08RIK	scl31085.7_246				21312971	NM_029335	1700026D08Rik		ILMN_2670708	002350242	S	1162	TTGATATCCCAATTGTGAAGAACTTAGCGCCCCCATGCAGCGCCCCTTGC										
Mus musculus	RefSeq	ILMN_216196	ILMN_216196	SIP1	NM_025656.1	NM_025656.1		66603	13385119	NM_025656.1	Sip1	NP_079932.1	ILMN_2920800	001300279	S	1144	GGGGGGTGGTGGATATGGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTC	12	+	59946036-59946085	12qC1	Mus musculus survivor of motor neuron protein interacting protein 1 (Sip1), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IEA]		Gemin2; 1700012N19Rik	Gemin2; 1700012N19Rik
Mus musculus	RefSeq	ILMN_215371	ILMN_215371	BC024479	NM_146222.2	NM_146222.2		235184	42734475	NM_146222.2	BC024479	NP_666334.2	ILMN_2727040	001660113	S	436	ATGTACGAGCGCGTGTCCCGGGCCCTGGCCGAGCTGGGCTACGAGCGGAC	9	+	37297341-37297390	9qA4	Mus musculus cDNA sequence BC024479 (BC024479), mRNA.				MGC37388	MGC37388
Mus musculus	RefSeq	ILMN_215371	ILMN_215371	BC024479	NM_146222.2	NM_146222.2		235184	42734475	NM_146222.2	BC024479	NP_666334.2	ILMN_2658680	003850338	S	1939	GGTTTTAGAGCCTTGATATAAGCAAATGTAGGTACATTCCATATTGGACA	9	+	37331383-37331432	9qA4	Mus musculus cDNA sequence BC024479 (BC024479), mRNA.				MGC37388	MGC37388
Mus musculus	RefSeq	ILMN_201332	ILMN_201332	LOC382462	XM_356519.1	XM_356519.1			38091011	XM_356519.1	LOC382462		ILMN_1252342	000150050	S	231	ATCAAAAACACAGTGGAGGGAGGAGACCTTTGGCGGAGGGAGCCGGAGCT										
Mus musculus	RefSeq	ILMN_192898	ILMN_245437	TBX4	NM_011536.1	NM_011536.1		21387	27777678	NM_011536.1	Tbx4	NP_035666.1	ILMN_1244228	005080088	S	1563	CGAGTTCCTCTACTCACAGAGCTTCTCCTTGACCCGGGAGTCATCCTTAC	11	+	85728151-85728200	11qC	Mus musculus T-box 4 (Tbx4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence ISS]; The process by which the anatomical structures of leg are generated and organized. Morphogenesis pertains to the creation of form. A leg is a limb on which an animal walks and stands [goid 35110] [evidence ISS]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	3930401C23	3930401C23
Mus musculus	MEEBO	ILMN_191791	ILMN_191791	D930020L01	scl0330557.1_168						D930020L01		ILMN_2482214	001440500	S	8	GGTCTCTCAGTTCTATGTTAGACCGTGAAACATTTGCATACACATCGTCT										
Mus musculus	RefSeq	ILMN_217436	ILMN_217436	ORC6L	NM_019716.1	NM_019716.1		56452	9790136	NM_019716.1	Orc6l	NP_062690.1	ILMN_2683190	006060376	S	916	CAGCAGAGTGATTTCCATCTCACTGCAGGCATGTGCAGTCTGTCTGGGAG	8	+	87831599-87831609:87831610-87831648	8qC3	Mus musculus origin recognition complex, subunit 6-like (S. cerevisiae) (Orc6l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	6720420I10Rik; Orc6; MGC91038	6720420I10Rik; Orc6; MGC91038
Mus musculus	RefSeq	ILMN_197110	ILMN_240744	AI607873	XM_980696.2	XM_980696.2		226691	149245348	XM_980696.2	AI607873	XP_985790.2	ILMN_1254577	006290592	S	2500	GTCTCCTGGCTCCACATGCAACTCTATCAACAACATCTAGCAACCTCCTG	1	-	175659225-175659274	1qH3	PREDICTED: Mus musculus expressed sequence AI607873 (AI607873), mRNA.					
Mus musculus	RefSeq	ILMN_202269	ILMN_210457	MTERFD3	NM_028832.2	NM_028832.2		74238	142388641	NM_028832.2	Mterfd3	NP_083108.1	ILMN_1213317	007510092	S	584	GCAGACCATCTGCCAGAGTTTCCTTTTGGTGTTAACAGCAGCGGGACTGC	10	-	84583085-84583134	10qC1	Mus musculus MTERF domain containing 3 (Mterfd3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA]		1700007D05Rik	1700007D05Rik
Mus musculus	Riken	ILMN_203485	ILMN_203485	MRG1	ri|A430109D20|PX00065C01|AK040611|5501					AK040611	Mrg1		ILMN_1215821	004780296	S	5087	GGCCGAGAGGAGGGAAAAAACTCAACTCAACAAAGGCCAACTGTAGCAAT										
Mus musculus	MEEBO	ILMN_212151	ILMN_212151	SENP6	scl0003463.1_14				46560560	NM_146003	Senp6		ILMN_2714855	007560482	S	4616	ATCAAAGACAGTGCACCTTGACTTGTGCTAGTGAGGCGACCCTGCTCCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186016	ILMN_186016	PPP1R15B	scl13481.1.1_135				27597066	NM_133819	Ppp1r15b		ILMN_2431897	006130100	S	20	ACCATTTATTAAAGGCATAAGTAAATTTGTATACTAGTAAAATGAAGGGC						A protein complex that possesses magnesium-dependent protein serine/threonine phosphatase (AMD phosphatase) activity, and consists of a catalytic subunit and one or more regulatory subunits that dictates the phosphatase's substrate specificity, function, and activity [goid 164] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IMP]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IC ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [evidence IC ]		
Mus musculus	MEEBO	ILMN_186016	ILMN_186016	PPP1R15B	scl13481.1.1_135				27597066	NM_133819	Ppp1r15b		ILMN_2705604	005260739	S	2354	GTTGTACAGCAATGTTAAGAAGTGAACAGCCTGCAACCCGTGCCCACTCT						A protein complex that possesses magnesium-dependent protein serine/threonine phosphatase (AMD phosphatase) activity, and consists of a catalytic subunit and one or more regulatory subunits that dictates the phosphatase's substrate specificity, function, and activity [goid 164] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IMP]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IC ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [evidence IC ]		
Mus musculus	RefSeq	ILMN_199586	ILMN_199586	LOC382762	XM_356665.1	XM_356665.1			38074731	XM_356665.1	LOC382762		ILMN_1242513	002630286	S	69	GCAGCCCTTTACAAACACCAACATCAATGGGCTGCGGAAAATAGCCTTTG										
Mus musculus	RefSeq	ILMN_237964	ILMN_237964	NOS1AP	NM_027528.1	NM_027528.1		70729	110625797	NM_027528.1	Nos1ap	NP_081804.1	ILMN_2844963	002450095	S	985	TTCAGCCGAGGTGTGACTGATCTGGATGCCGTAGGGAAGGATGGAGGCTC				1qH3	Mus musculus nitric oxide synthase 1 (neuronal) adaptor protein (Nos1ap), mRNA. XM_994037			Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence ISO]; Interacting selectively with the enzyme nitric-oxide synthase [goid 50998] [evidence ISO]	6330408P19Rik; Capon	6330408P19Rik; Capon
Mus musculus	RefSeq	ILMN_222721	ILMN_222721	POLR1D	NM_181730.3	NM_181730.3		20018	142362039	NM_181730.3	Polr1d	NP_859419.1	ILMN_1245284	006590397	S	763	CCTACCTTACTTGGAAGTTCGTTTCAAAACAGGCAGTTTTAGAATTTGAG	5	+	147922785-147922834	5qG3	Mus musculus polymerase (RNA) I polypeptide D (Polr1d), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5736] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU018636; MGC107156; 16kDa; mRPA16; 1110003G10Rik; C81327	AU018636; MGC107156; 16kDa; mRPA16; 1110003G10Rik; C81327
Mus musculus	RefSeq	ILMN_213314	ILMN_213314	PLSCR2	NM_008880.2	NM_008880.2		18828	31982114	NM_008880.2	Plscr2	NP_032906.2	ILMN_2635895	002490368	S	1290	CAAGGAGATCATATGATTGAGAGACCTGGGGCTTTTTGATTTCTTCATTG	9	+	92192103-92192152	9qE3.3	Mus musculus phospholipid scramblase 2 (Plscr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_184574	ILMN_184574	AI413582	scl00106672.1_289				50872156	NM_001002895	AI413582		ILMN_2419769	006480470	S	3	CCTCGAAGGCCAAATTCCCTATAGTGAGTCGTATTAAATTCGTAATCATG										
Mus musculus	RefSeq	ILMN_199669	ILMN_199669	LOC383808	XM_357268.1	XM_357268.1			38075851	XM_357268.1	LOC383808		ILMN_2536062	005260717	S	731	AGGTCGCAGCTGAAAAGGCTCACGATAAAACAGGAAATGAGGAAGGCCCC										
Mus musculus	RefSeq	ILMN_212771	ILMN_212771	CUX1	NM_009986.3	NM_009986.3		13047	110835728	NM_009986.3	Cux1	NP_034116.3	ILMN_1240019	001190273	S	4367	CCGGGACAACCTGGTGCGGAAGAAGAAGGCTGCGAACTTGAACAGCATCA	5	-	136750716-136750765	5qG2	Mus musculus cut-like homeobox 1 (Cux1), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Cux1; AA407197; KIAA4047; mKIAA4047; Cux-1; Phox2; Cux; CDP; MGC102214	Cux1; AA407197; KIAA4047; mKIAA4047; Cux-1; Phox2; Cux; CDP; MGC102214
Mus musculus	RefSeq	ILMN_212771	ILMN_212771	CUX1	NM_009986.3	NM_009986.3		13047	110835728	NM_009986.3	Cux1	NP_034116.3	ILMN_1229977	006270608	S	3727	CCATCGAGGAACTTGCCACACAACTCAACCTGAAGACCAGCACCGTCATC	5	-	136755319-136755368	5qG2	Mus musculus cut-like homeobox 1 (Cux1), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Cux1; AA407197; KIAA4047; mKIAA4047; Cux-1; Phox2; Cux; CDP; MGC102214	Cux1; AA407197; KIAA4047; mKIAA4047; Cux-1; Phox2; Cux; CDP; MGC102214
Mus musculus	RefSeq	ILMN_212771	ILMN_212771	CUX1	NM_009986.3	NM_009986.3		13047	110835728	NM_009986.3	Cux1	NP_034116.3	ILMN_1250346	000360341	S	1096	AGTTGGCTGCCAAAGAGCGGGAGATCGCCCAGCTGGTGGAAGATGTGCAG	5	-	136802715-136802764	5qG2	Mus musculus cut-like homeobox 1 (Cux1), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Cux1; AA407197; KIAA4047; mKIAA4047; Cux-1; Phox2; Cux; CDP; MGC102214	Cux1; AA407197; KIAA4047; mKIAA4047; Cux-1; Phox2; Cux; CDP; MGC102214
Mus musculus	RefSeq	ILMN_212771	ILMN_212771	CUX1	NM_009986.3	NM_009986.3		13047	110835728	NM_009986.3	Cux1	NP_034116.3	ILMN_1223862	005820465	S	4662	GCGGGCCACAGGGCAAAATCGCCATAGGCCAAGGTGCATATAGAAAACAA	5	-	136750421-136750470	5qG2	Mus musculus cut-like homeobox 1 (Cux1), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Cux1; AA407197; KIAA4047; mKIAA4047; Cux-1; Phox2; Cux; CDP; MGC102214	Cux1; AA407197; KIAA4047; mKIAA4047; Cux-1; Phox2; Cux; CDP; MGC102214
Mus musculus	RefSeq	ILMN_213906	ILMN_213906	MTMR3	NM_028860.1	NM_028860.1		74302	23346434	NM_028860.1	Mtmr3	NP_083136.1	ILMN_2778409	001570497	S	3797	GCTGCTGTTCCTTTAACAGGCTCACACACAGCCTGGGCAGTCCAAGAGGC	11	-	4382684-4382733	11qA1	Mus musculus myotubularin related protein 3 (Mtmr3), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	AI255150; AW557713; mKIAA0371; FYVE-DSP1; 1700092A20Rik; MGC78036; ZFYVE10	AI255150; AW557713; mKIAA0371; FYVE-DSP1; 1700092A20Rik; MGC78036; ZFYVE10
Mus musculus	MEEBO	ILMN_216605	ILMN_216605	AI987944	scl0233168.1_120	NM_183167.1			34147200	NM_183167.1	AI987944		ILMN_2673099	004230709	S	1571	CTGACAACTTTCAACAAAGTATTCAAGAATTATGTCCCTCTGTTATGCAC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_238029	ILMN_238029	TAAR6	NM_001010828.1	NM_001010828.1		215855	58082054	NM_001010828.1	Taar6	NP_001010828.1	ILMN_2875720	007320048	S	982	GGCCAGGTGTTCAAGAACAGCTCAGCCACTATGAACTTGTTCTCTGAGCA	10	-	23704421-23704470	10qA4	Mus musculus trace amine-associated receptor 6 (Taar6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm228	Gm228
Mus musculus	RefSeq	ILMN_212214	ILMN_212214	BARD1	NM_007525.2	NM_007525.2		12021	118131098	NM_007525.2	Bard1	NP_031551.1	ILMN_1242054	002760609	S	2250	GCCTGAGTCGGATCAGCGCTTCTGTACGCAGTACATCGTCTACGAAGACC	1	-	71077203-71077252	1qC3	Mus musculus BRCA1 associated RING domain 1 (Bard1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_256740	ILMN_256740	P2RX7	NM_001038887.1	NM_001038887.1		18439	84781763	NM_001038887.1	P2rx7	NP_001033976.1	ILMN_3162824	002600519	I	651	GTGATCGCAGAGAGGCCCAGCTCAAAAGGGAGGCAGATACTTGGTCTGTC	5	+	123105112-123105161	5qF	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7 (P2rx7), transcript variant 4, mRNA.	The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IMP]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The formation of a pore complex, a small opening in a membrane that allows the passage of liquids and/or gases [goid 46931] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; The process by which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome [goid 1845] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus [goid 51602] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 alpha from a cell or group of cells [goid 50717] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein in a multicellular organism, occurring at the tissue, organ, or organismal level [goid 44254] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; The directed movement of nicotinamide adenine dinucleotide into, out of, within or between cells; transport may be of either the oxidized form, NAD, or the reduced form, NADH [goid 43132] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51901] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid [goid 14054] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of glutamate [goid 14049] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a prostaglandin from a cell or group of cells [goid 32308] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluid shear stress stimulus. Fluid shear stress is the force acting on an object in a system where the fluid is moving across a solid surface [goid 34405] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production [goid 32731] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic substance stimulus [goid 14070] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; The assembly of a bleb, a cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32060] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; The evagination of a membrane, resulting in formation of a vesicle [goid 6900] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IDA]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the plasma membrane [goid 7009] [evidence IDA]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IDA]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The transfer of a phospholipid from its site of synthesis to the plasma membrane [goid 6649] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IMP]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence ISO]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence IMP]; Interacting selectively with lipopolysaccharide [goid 1530] [evidence IDA]	AI467586	AI467586
Mus musculus	RefSeq	ILMN_197188	ILMN_197188	LOC380844	XM_358441.1	XM_358441.1			38074510	XM_358441.1	LOC380844		ILMN_1250257	006280671	S	1268	CTCCCACTGCTATCTTGAGTGTGTGGCTTAGCATCATGTATCACGCCTGG										
Mus musculus	MEEBO	ILMN_185644	ILMN_185644	SCL0003328.1_225	scl0003328.1_225						scl0003328.1_225		ILMN_2428782	000610240	S	4	CCAGACTCTTGGGCATTTTCATTGTCTGGATGCAACTGAATTTCTCCCAG										
Mus musculus	RefSeq	ILMN_211436	ILMN_211436	SCP2	NM_011327.2	NM_011327.2		20280	142373930	NM_011327.2	Scp2	NP_035457.1	ILMN_2705886	002970017	S	1443	GAAAGATGGCCCTGGAGGCAAAGAAGCTACCTGGGTGGTGGATGTGAAGA	4	-	107728073-107728122	4qC7	Mus musculus sterol carrier protein 2, liver (Scp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IMP]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA];  [goid 5498] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA];  [goid 4770] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA + propanoyl-CoA = CoA + 3alpha,7alpha,12alpha-trihydroxy-24-oxo-5beta-cholestanoyl-CoA [goid 33814] [evidence IEA]	C76618; SCP-2; ns-LTP; SCPx; NSL-TP; C79031; AA409893; AA409774	C76618; SCP-2; ns-LTP; SCPx; NSL-TP; C79031; AA409893; AA409774
Mus musculus	RefSeq	ILMN_211436	ILMN_211436	SCP2	NM_011327.2	NM_011327.2		20280	142373930	NM_011327.2	Scp2	NP_035457.1	ILMN_1221684	001110554	S	929	CCGGCCTGACACCCAACGATGTCGACGTGATAGAGCTTCACGATTGCTTC	4	-	107757808-107757857	4qC7	Mus musculus sterol carrier protein 2, liver (Scp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IMP]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA];  [goid 5498] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA];  [goid 4770] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA + propanoyl-CoA = CoA + 3alpha,7alpha,12alpha-trihydroxy-24-oxo-5beta-cholestanoyl-CoA [goid 33814] [evidence IEA]	C76618; SCP-2; ns-LTP; SCPx; NSL-TP; C79031; AA409893; AA409774	C76618; SCP-2; ns-LTP; SCPx; NSL-TP; C79031; AA409893; AA409774
Mus musculus	RefSeq	ILMN_211436	ILMN_211436	SCP2	NM_011327.2	NM_011327.2		20280	142373930	NM_011327.2	Scp2	NP_035457.1	ILMN_2651412	001170647	S	2400	TTTCCAGAGATACGGGCTTCAAATTATAGTTTCATATTAATAAGTGTATA	4	-	107716603-107716652	4qC7	Mus musculus sterol carrier protein 2, liver (Scp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IMP]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA];  [goid 5498] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA];  [goid 4770] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA + propanoyl-CoA = CoA + 3alpha,7alpha,12alpha-trihydroxy-24-oxo-5beta-cholestanoyl-CoA [goid 33814] [evidence IEA]	C76618; SCP-2; ns-LTP; SCPx; NSL-TP; C79031; AA409893; AA409774	C76618; SCP-2; ns-LTP; SCPx; NSL-TP; C79031; AA409893; AA409774
Mus musculus	RefSeq	ILMN_220514	ILMN_220514	FXYD7	NM_022007.1	NM_022007.1		57780	11612660	NM_022007.1	Fxyd7	NP_071290.1	ILMN_2723066	001570626	S	371	AGAAGGCGGTGGGGACCCAGCCTGGCGCCAGGGAGTGTGCCCCCAATCAG	7	-	31827791-31827840	7qB1	Mus musculus FXYD domain-containing ion transport regulator 7 (Fxyd7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	1110035I01Rik	1110035I01Rik
Mus musculus	RefSeq	ILMN_189663	ILMN_254040	1700016D18RIK	XM_986799.1	XM_986799.1		76418	94383221	XM_986799.1	1700016D18Rik	XP_991893.1	ILMN_1217084	007550593	S	181	CCTCGACCCAGTGGCCTGTCTAGAGGTTTGTCCCCTTAATTGTTCATTAA	8	+	38572493-38572542	8qA4	PREDICTED: Mus musculus RIKEN cDNA 1700016D18 gene (1700016D18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218607	ILMN_218607	GCK	NM_010292.4	NM_010292.4		103988	118129970	NM_010292.4	Gck	NP_034422.2	ILMN_2698004	003850725	S	2031	GGGAGCGCCTCACTCTGCACTGTTAGCAGGATGGCAGCTTCAACACTCAC	11	-	5800990-5801039	11qA1	Mus musculus glucokinase (Gck), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; A cellular homeostatic process involved in the maintenance of an internal equilibrium of glucose within a cell or between a cell and its external environment [goid 1678] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y [goid 46835] [evidence IMP]; The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y [goid 46835] [evidence IDA]; The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y [goid 46835] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y [goid 46835] [evidence IDA]; Any process that modulates the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43266] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The chemical reactions and pathways involving nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; metabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6739] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + D-glucose = ADP + D-glucose 6-phosphate [goid 4340] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [evidence IEA]; Catalysis of the reaction: ATP + D-glucose = ADP + D-glucose 6-phosphate [goid 4340] [evidence IMP]; Catalysis of the reaction: ATP + D-glucose = ADP + D-glucose 6-phosphate [goid 4340] [evidence IDA]; Catalysis of the reaction: ATP + D-glucose = ADP + D-glucose 6-phosphate [goid 4340] [evidence IMP]; Catalysis of the reaction: ATP + D-glucose = ADP + D-glucose 6-phosphate [goid 4340] [evidence IDA]; Catalysis of the reaction: ATP + D-glucose = ADP + D-glucose 6-phosphate [goid 4340] [evidence IMP]	HXKP; GLK; MODY2; HK4; HKIV; Gk	HXKP; GLK; MODY2; HK4; HKIV; Gk
Mus musculus	RefSeq	ILMN_188753	ILMN_239126	LGI2	NM_144945.2	NM_144945.2		246316	118130076	NM_144945.2	Lgi2	NP_659194.1	ILMN_2635700	005270139	S	1729	CACAGCCGTCTCCACCGACAGGAGAGATTTCTTTTTTGCATCCAGTTTCA	5	-	52929251-52929300	5qC1	Mus musculus leucine-rich repeat LGI family, member 2 (Lgi2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1916	mKIAA1916
Mus musculus	RefSeq	ILMN_215088	ILMN_215088	KCNAB3	NM_010599.3	NM_010599.3		16499	142373382	NM_010599.3	Kcnab3	NP_034729.2	ILMN_2655386	002060601	S	2293	GTGTCGCAGAAATGGCAAGGTGGCCCTTAGAAAACAAAGTGCTCTGGAGG	11	+	69146299-69146348	11qB3	Mus musculus potassium voltage-gated channel, shaker-related subfamily, beta member 3 (Kcnab3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Kcnab4; mKv(beta)4; C330022D06Rik	Kcnab4; mKv(beta)4; C330022D06Rik
Mus musculus	Riken	ILMN_207428	ILMN_207428	YWHAG	ri|4921535H13|PX00639C11|AK076615|2240					AK076615	Ywhag		ILMN_2587515	001260332	S	1840	GCCAGCTGTTCTCTTTCCTGGGGCATAGGCATCTTGGCATGGAGCTAGCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199077	ILMN_230319	LOC671225	XM_985609.1	XM_985609.1		671225	94389739	XM_985609.1	LOC671225	XP_990703.1	ILMN_2533967	004900114	S	826	CAGTCTGCCCGCACTTTGATTTGTATGCACTGGCTCCAGAGGGGTTGGCG					PREDICTED: Mus musculus hypothetical protein LOC671225 (LOC671225), mRNA.					
Mus musculus	RefSeq	ILMN_200883	ILMN_200883	LOC381888	XM_358670.1	XM_358670.1			38086818	XM_358670.1	LOC381888		ILMN_1231535	004610564	S	505	TGGTGCCCAGGTCTTGGTGGAGCAGGGAACGGCTGCCATTGATTATGTCC										
Mus musculus	RefSeq	ILMN_214744	ILMN_214744	NES	NM_016701.3	NM_016701.3		18008	50363231	NM_016701.3	Nes	NP_057910.3	ILMN_2703267	006510240	S	5768	GGCCAGCACTCTTAGCTTTGATAACTTGACCTGTGGTATCTCTCGTGGAG	3	+	87784015-87784064	3qF1	Mus musculus nestin (Nes), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	C78523; ESTM46; AA166324	C78523; ESTM46; AA166324
Mus musculus	RefSeq	ILMN_214744	ILMN_214744	NES	NM_016701.3	NM_016701.3		18008	50363231	NM_016701.3	Nes	NP_057910.3	ILMN_2904590	007570626	S	5461	ATATCAGTGGCCAGGGCCCCAACCTGGAGTCAGAGCAAGTGAATGGGAGG	3	+	87783708-87783757	3qF1	Mus musculus nestin (Nes), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	C78523; ESTM46; AA166324	C78523; ESTM46; AA166324
Mus musculus	RefSeq	ILMN_212412	ILMN_226654	SYMPK	XM_485873.4	XM_485873.4		68188	149256562	XM_485873.4	Sympk	XP_485873.2	ILMN_1245437	002320010	S	3851	ATGGACGACGACTCGGGGCTGGCTGAAACCACACTGCTGGACTCTAGTCT	7	+	19639579-19639628	7qA3	PREDICTED: Mus musculus symplekin (Sympk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211735	ILMN_211735	COQ6	NM_172582.1	NM_172582.1		217707	27369831	NM_172582.1	Coq6	NP_766170.1	ILMN_2898403	004260504	S	1078	GCTGGGACATGCTGCTGAGTACGTCCGGCCTCGGGTGGCCCTCATTGGTG	12	+	85262045-85262089:85262167-85262171	12qD1	Mus musculus coenzyme Q6 homolog (yeast) (Coq6), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]; The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor [goid 16709] [evidence IEA]	AW742344; 5930427M12Rik	AW742344; 5930427M12Rik
Mus musculus	MEEBO	ILMN_184321	ILMN_184321	1190002A23RIK	scl23516.1.529_18						1190002A23Rik		ILMN_2417686	005860692	S	5	TATAAACGGTTTGAGATAATTTAAGAAATCATTTAATTTTTTATGCTTGC										
Mus musculus	RefSeq	ILMN_213592	ILMN_213592	CSRNP2	NM_153407.2	NM_153407.2		207785	118130114	NM_153407.2	Csrnp2	NP_700456.1	ILMN_2638721	001850082	S	3983	GCACACAGGTTGGACTCTCAATGTGAACCCAAAGCTTGTCTGGCTCTCTG	15	-	100310094-100310143	15qF1	Mus musculus cysteine-serine-rich nuclear protein 2 (Csrnp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC28165; taip-12	MGC28165; taip-12
Mus musculus	RefSeq	ILMN_199822	ILMN_199822	LOC383953	XM_357346.1	XM_357346.1			38077663	XM_357346.1	LOC383953		ILMN_2536606	005080703	S	102	TGCTGTACACATGCGGTGGCTGCGCCGGGCCACCACCAAGACCGTCACGT										
Mus musculus	RefSeq	ILMN_198943	ILMN_198943	LOC333405	XM_289643.2	XM_289643.2			38089958	XM_289643.2	LOC333405		ILMN_1228449	004760156	S	116	TGGAAGAGTCGGAGAGTGCAGCCTTATACCCAGGTGAGTGCCTGGAATCC										
Mus musculus	RefSeq	ILMN_193581	ILMN_252026	KAZALD1	NM_178929.3	NM_178929.3		107250	142353193	NM_178929.3	Kazald1	NP_849260.1	ILMN_2710176	001230068	S	1213	TCTTTCAGAAGCGTCCCCGGTAGAGATGAGCGCAGCGGAACTGATTTAGT	19	+	45153612-45153661	19qC3	Mus musculus Kazal-type serine peptidase inhibitor domain 1 (Kazald1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	IGFBP-rP10; Bono1; AI842353	IGFBP-rP10; Bono1; AI842353
Mus musculus	RefSeq	ILMN_213928	ILMN_213928	OLFR1184	NM_146823.1	NM_146823.1		258820	22129210	NM_146823.1	Olfr1184	NP_667034.1	ILMN_2855467	001070270	S	540	CCCTTTGCTGAAAGTTGCCTGTACCGACACCACCATCACTGGTGTCCTGG	2	+	88327430-88327479	2qD	Mus musculus olfactory receptor 1184 (Olfr1184), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR225-3	MOR225-3
Mus musculus	RefSeq	ILMN_212505	ILMN_253968	HDX	NM_001080549.2	NM_001080549.2		245596	125628655	NM_001080549.2	Hdx	NP_001074018.1	ILMN_2627259	003120333	S	4089	CCGTTTGTTTGAGTAGGAACCCATTTCTGGTCTCAAGTCTCTCTGTGATC	X	-	108688935-108688984	XqE1	Mus musculus highly divergent homeobox (Hdx), mRNA. XM_987887	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D030011N01Rik; Gm380	D030011N01Rik; Gm380
Mus musculus	RefSeq	ILMN_214443	ILMN_214443	PDGFRL	NM_026840.2	NM_026840.2		68797	42476141	NM_026840.2	Pdgfrl	NP_081116.2	ILMN_2903926	001110440	S	1096	CACCTGGAGACTGATTCACAGAGGACTGGGACACACCACAAGAATCTCCC	8	+	42075695-42075744	8qA4	Mus musculus platelet-derived growth factor receptor-like (Pdgfrl), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			1110039P19Rik; AV013190	1110039P19Rik; AV013190
Mus musculus	RefSeq	ILMN_214443	ILMN_214443	PDGFRL	NM_026840.2	NM_026840.2		68797	42476141	NM_026840.2	Pdgfrl	NP_081116.2	ILMN_1232822	003890066	S	1424	AGTATGTATTTTGACTCAGCCATGTTTCTACTTTTTATACTGAGAAAACA	8	+	42076023-42076072	8qA4	Mus musculus platelet-derived growth factor receptor-like (Pdgfrl), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			1110039P19Rik; AV013190	1110039P19Rik; AV013190
Mus musculus	RefSeq	ILMN_206555	ILMN_214443	PDGFRL	NM_026840.2	NM_026840.2		68797	42476141	NM_026840.2	Pdgfrl	NP_081116.2	ILMN_1259909	005700184	S	986	CGCCCCTCACTTTGTTAGAGGAGGCCAAGATGGTTGTTGATGGAGGGCCA	8	+	42074215-42074264	8qA4	Mus musculus platelet-derived growth factor receptor-like (Pdgfrl), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			1110039P19Rik; AV013190	1110039P19Rik; AV013190
Mus musculus	Riken	ILMN_204208	ILMN_204208	9530076I17RIK	ri|9530076I17|PX00113P20|AK035608|2034					AK035608	9530076I17Rik		ILMN_2563208	003290653	S	1979	AAATCCTGCCTGGGAGCCCTGTGCAGCACTTGGCTTCTGGGGACCTTTAG										
Mus musculus	Riken	ILMN_206139	ILMN_206139	RW1-PENDING	ri|A430077D20|PX00137M16|AK079825|3971					AK079825	Rw1-pending		ILMN_2577853	002450576	S	3777	CTGGACCCCAGAAAGAGCCTCCAGGGTGCAAGACATGAGCCAAGACCAAG										
Mus musculus	Riken	ILMN_205057	ILMN_205057	TERF2	ri|C230056A06|PX00176I01|AK048767|2902					AK048767	Terf2		ILMN_1223251	001050370	S	2566	TGGCCTGGCTTTTCCTGAGCCACACAGCCACCTGACAGCTAGAAGGATGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32206] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32206] [evidence IMP]; A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse [goid 31848] [evidence IMP]; A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse [goid 31848] [evidence IDA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219557	ILMN_219557	C79127	NM_177691.3	NM_177691.3		232941	142355065	NM_177691.3	C79127	NP_808359.1	ILMN_1241721	003610164	S	1302	CTCAGGGGACCATATGCACATCTCAGGGGAAATCTGTGCTTCCCTACGAG	7	-	19862435-19862484	7qA3	Mus musculus expressed sequence C79127 (C79127), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	A930002H20	A930002H20
Mus musculus	RefSeq	ILMN_184690	ILMN_184690	TMEM17	NM_153596.3	NM_153596.3		103765	146149098	NM_153596.3	Tmem17	NP_705824.1	ILMN_1231660	002970537	S	723	CCTCCAGGACTTTGATCAGCTGTCTTCAAGCAGTGCAGCTGTAAGGAGGG				11qA3.2	Mus musculus transmembrane protein 17 (Tmem17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW049890; RP23-401L13.4; MGC40971; AI503894	AW049890; RP23-401L13.4; MGC40971; AI503894
Mus musculus	RefSeq	ILMN_206880	ILMN_314098	8430429K09RIK	XR_033224.1	XR_033224.1		71523	149261612	XR_033224.1	8430429K09Rik		ILMN_1245342	000630202	S	493	CCAAAGTCCACATTCTGCTCACAAGCAGCAAGCCTGGAGCTCAGAGGAGC	11	+	3371558-3371589:3379263-3379280	11qA1	PREDICTED: Mus musculus RIKEN cDNA 8430429K09 gene (8430429K09Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_223031	ILMN_226121	GM1818	XR_001538.1	XR_001538.1		217536	94392815	XR_001538.1	Gm1818		ILMN_2758353	004260008	S	665	TCCTACCATATAAACATGAAAGACGAATACTTTGGAAAATTCTGTTCGAT	12	-	49656857-49656906	12qB3	PREDICTED: Mus musculus gene model 1818, (NCBI) (Gm1818), misc RNA.					
Mus musculus	MEEBO	ILMN_185879	ILMN_185879	AI256775	scl43745.5_10				31342768	NM_178916	AI256775		ILMN_2729144	001780202	S	1022	CTATGGACATTCGCTGTTACCATTCTGGAGGGCCCTTACACTTGGGAGAA										
Mus musculus	RefSeq	ILMN_251832	ILMN_251832	GM776	NM_001033427.1	NM_001033427.1		332427	85701936	NM_001033427.1	Gm776	NP_001028599.1	ILMN_2978946	002140446	S	2236	GAGTGAGAAGCTAGGGGCACAGACAGGAAGAGCGAGTGAGAATCCTGAGG	1	-	37850747-37850796	1qB	Mus musculus gene model 776, (NCBI) (Gm776), mRNA.					
Mus musculus	MEEBO	ILMN_187713	ILMN_187713	KRT2-PS1	scl064819.10_70						Krt2-ps1		ILMN_2446477	006660685	S	19	TCTGTTCGAGGGCTACATCGAGGCGCTGAGGCGGGAAGCTGAGTGTGTGG										
Mus musculus	RefSeq	ILMN_210110	ILMN_210110	THBS3	NM_013691.1	NM_013691.1		21827	8567413	NM_013691.1	Thbs3	NP_038719.1	ILMN_2840958	005270156	S	2747	ATTCTGGGGTGATTATTGACACGTCCATGCGAGGGGGGCGTCTCGGCGTA	3	+	89030261-89030310	3qF1	Mus musculus thrombospondin 3 (Thbs3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Thbs-3	Thbs-3
Mus musculus	RefSeq	ILMN_210110	ILMN_210110	THBS3	NM_013691.1	NM_013691.1		21827	8567413	NM_013691.1	Thbs3	NP_038719.1	ILMN_2840956	007550731	S	3051	GGTGGCGACCCCATTGTGCAGGGGTTGGGAGACTTTCAAGGGGTATTATT	3	+	89030647-89030696	3qF1	Mus musculus thrombospondin 3 (Thbs3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Thbs-3	Thbs-3
Mus musculus	RefSeq	ILMN_210110	ILMN_210110	THBS3	NM_013691.1	NM_013691.1		21827	8567413	NM_013691.1	Thbs3	NP_038719.1	ILMN_2654651	001410253	S	2957	TGAACTCTGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTA	3	+	89030553-89030602	3qF1	Mus musculus thrombospondin 3 (Thbs3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Thbs-3	Thbs-3
Mus musculus	RefSeq	ILMN_212944	ILMN_212944	4921509E07RIK	NM_027597.3	NM_027597.3		70897	141802769	NM_027597.3	4921509E07Rik	NP_081873.2	ILMN_2631883	000050735	S	1305	AGAAAATATGATTCGTCTTCAAAACATACATTTAAAGGCCACGGAATCCA	12	+	79820570-79820619	12qC3	Mus musculus RIKEN cDNA 4921509E07 gene (4921509E07Rik), mRNA.				4930516C23Rik	4930516C23Rik
Mus musculus	RefSeq	ILMN_210198	ILMN_210198	TFAM	NM_009360.4	NM_009360.4		21780	145966787	NM_009360.4	Tfam	NP_033386.1	ILMN_2603178	002680193	S	846	CGGAGTTGTCATTGGGATTAGGCCCAAGAAACCAGTTAGGTCTCAAAGCC				10qB5.3	Mus musculus transcription factor A, mitochondrial (Tfam), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a mitochondrial respiratory chain complex [goid 33108] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	Hmgts; mtTFA; tsHMG; AI661103	Hmgts; mtTFA; tsHMG; AI661103
Mus musculus	RefSeq	ILMN_200627	ILMN_200627	LOC381787	XM_358652.1	XM_358652.1			38084541	XM_358652.1	LOC381787		ILMN_1235150	002650593	S	671	GGCACATGACAAGTCAGGCGTGTTGGGCATGCGGCTAGACTCCCAGCATT										
Mus musculus	RefSeq	ILMN_223490	ILMN_223490	OLFR910	NM_146811.1	NM_146811.1		258807	22129236	NM_146811.1	Olfr910	NP_667022.1	ILMN_1214829	001440754	S	619	ATCACTGTGCCCAGTATTGTCATCATCATTTCTTATGGCTTCATCCTCTC	9	+	38347100-38347149	9qA5.1	Mus musculus olfactory receptor 910 (Olfr910), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR165-3	MOR165-3
Mus musculus	RefSeq	ILMN_203429	ILMN_230067	ATF7IP2	XM_897318.2	XM_897318.2		75329	94400047	XM_897318.2	Atf7ip2	XP_902411.1	ILMN_1229033	004920747	S	1969	CAGTGCTGCTGATACAAGTGAAGAAGCCGAAGATCCACAGTACTGGCACT	16	+	10127377-10127426	16qA1	PREDICTED: Mus musculus activating transcription factor 7 interacting protein 2, transcript variant 3 (Atf7ip2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_201223	ILMN_201223	LOC384943	XM_357953.1	XM_357953.1			38089938	XM_357953.1	LOC384943		ILMN_1235385	006860669	S	161	CCTCCTCTGCTCTAGAGGATACTGGGGGGAGCCCCAGCTGTAAAAACAAG										
Mus musculus	RefSeq	ILMN_222185	ILMN_222185	OLFR653	NM_147074.1	NM_147074.1		57250	22203818	NM_147074.1	Olfr653	NP_667285.1	ILMN_2745912	000520681	S	692	TGCTGCGACTGCCCTCAAAGGATGCCCAGTTCCGAGCATTCAGCACATGT	7	+	111728853-111728902	7qE3	Mus musculus olfactory receptor 653 (Olfr653), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR33-1; MGC151339; Ors19	MOR33-1; MGC151339; Ors19
Mus musculus	RefSeq	ILMN_214829	ILMN_214829	THAP3	NM_175152.3	NM_175152.3		69876	142380266	NM_175152.3	Thap3	NP_780361.1	ILMN_2652425	006370152	S	834	AGTTGTCGGGTGGGGGCCCAAGTACTGCGGAGGCACCGTCCCAGGTTTCT	4	-	151356988-151357037	4qE2	Mus musculus THAP domain containing, apoptosis associated protein 3 (Thap3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2210418H06Rik; 2010013E08Rik	2210418H06Rik; 2010013E08Rik
Mus musculus	RefSeq	ILMN_249043	ILMN_249043	ACADVL	NM_017366.1	NM_017366.1		11370	23956083	NM_017366.1	Acadvl	NP_059062.1	ILMN_2956932	004780554	S	1855	GTGAGGGCTACCCGACGGCACAGCATGAGAAAATGCTCTGTGATAGCTGG	11	-	69826728-69826777	11qB3	Mus musculus acyl-Coenzyme A dehydrogenase, very long chain (Acadvl), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	vlcad	vlcad
Mus musculus	RefSeq	ILMN_208762	ILMN_208762	MRRF	NM_026422.1	NM_026422.1		67871	21312751	NM_026422.1	Mrrf	NP_080698.1	ILMN_2940766	007000646	S	1397	GTTCCGCTCCTAACTAGCCCTGTTTACTGTGCCATCAGTTGCCCGCTCTG	2	+	36045219-36045268	2qB	Mus musculus mitochondrial ribosome recycling factor (Mrrf), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]		RRF; MTRRF; MRFF; 2400002D02Rik	RRF; MTRRF; MRFF; 2400002D02Rik
Mus musculus	RefSeq	ILMN_208762	ILMN_208762	MRRF	NM_026422.1	NM_026422.1		67871	21312751	NM_026422.1	Mrrf	NP_080698.1	ILMN_2662787	004200167	S	1254	AAGCCTAAATAAATTGGAAAATAACAACCACAGAAGAAAGATAGAGTGGT	2	+	36045076-36045125	2qB	Mus musculus mitochondrial ribosome recycling factor (Mrrf), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]		RRF; MTRRF; MRFF; 2400002D02Rik	RRF; MTRRF; MRFF; 2400002D02Rik
Mus musculus	RefSeq	ILMN_208762	ILMN_208762	MRRF	NM_026422.1	NM_026422.1		67871	21312751	NM_026422.1	Mrrf	NP_080698.1	ILMN_2589266	006650433	S	288	GAGCCTTGGTCGAGGATATCATCAGCTTGGAAGAGGTGGATGAAGACATG	2	+	36003465-36003514	2qB	Mus musculus mitochondrial ribosome recycling factor (Mrrf), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]		RRF; MTRRF; MRFF; 2400002D02Rik	RRF; MTRRF; MRFF; 2400002D02Rik
Mus musculus	RefSeq	ILMN_199679	ILMN_199679	LOC382877	XM_356724.1	XM_356724.1			38075969	XM_356724.1	LOC382877		ILMN_1241665	001820092	S	1255	TGGGCCATAGTTGCAAGACAGCCCCAGACAACTGTCCAGATTGGCCATGG										
Mus musculus	Riken	ILMN_205156	ILMN_205156	CDH8	ri|A630032D20|PX00144L19|AK041720|3217					AK041720	Cdh8		ILMN_2570410	007610753	S	3055	CACTCAGATACCTGGTTGTGTGAGGTATAGACTGAGAGCACACTGTCACA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194966	ILMN_194966	1700124K17RIK	scl0073642.1_25						1700124K17Rik		ILMN_1232008	004860121	S	1	GCTGCCTTTGCTTTAAAACAGTATTACTTGCGTTATCTAGAAAAGTACGA										
Mus musculus	RefSeq	ILMN_210785	ILMN_210785	GRIK1	NM_146072.2	NM_146072.2		14805	84000014	NM_146072.2	Grik1	NP_666184.2	ILMN_3067105	004070070	I	3133	GGAACAAAGTAAGGTTTCATGGGAGCAAAACAGAAAGCCTTGGTGTAGAG	16	-	87785667-87785716	16qC3.3	Mus musculus glutamate receptor, ionotropic, kainate 1 (Grik1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex [goid 8328] [evidence IC ]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity [goid 48172] [evidence TAS]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid [goid 14054] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32230] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA];  [goid 15277] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 15277] [evidence IGI];  [goid 15277] [evidence IDA]	A830007B11Rik; MGC25101; Glur-5; D16Ium24; D16Ium24e; Glur5	A830007B11Rik; MGC25101; Glur-5; D16Ium24; D16Ium24e; Glur5
Mus musculus	RefSeq	ILMN_210785	ILMN_210785	GRIK1	NM_146072.2	NM_146072.2		14805	84000014	NM_146072.2	Grik1	NP_666184.2	ILMN_3145360	002260189	A	3305	TCAGAGACGAACTCAGAGAAAAGAGACTGTGGCGTGACCCAAGAACACGC	16	-	87785038-87785052:87785053-87785087	16qC3.3	Mus musculus glutamate receptor, ionotropic, kainate 1 (Grik1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex [goid 8328] [evidence IC ]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity [goid 48172] [evidence TAS]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid [goid 14054] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32230] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA];  [goid 15277] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 15277] [evidence IGI];  [goid 15277] [evidence IDA]	A830007B11Rik; MGC25101; Glur-5; D16Ium24; D16Ium24e; Glur5	A830007B11Rik; MGC25101; Glur-5; D16Ium24; D16Ium24e; Glur5
Mus musculus	RefSeq	ILMN_220382	ILMN_220382	G6PDX	NM_008062.2	NM_008062.2		14381	50053914	NM_008062.2	G6pdx	NP_032088.1	ILMN_2721337	000240653	S	2135	CATTGTAGGGTTTCAGGGCCACCACTGGCCCTATCTGAGCCACCCATCTT	X	-	71659298-71659347	XqA7.3	Mus musculus glucose-6-phosphate dehydrogenase X-linked (G6pdx), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; biosynthesis may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6741] [evidence IDA]; The chemical reactions and pathways resulting in the formation of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; biosynthesis may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6741] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; biosynthesis may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6741] [evidence IDA]; The chemical reactions and pathways resulting in the formation of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; biosynthesis may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6741] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; biosynthesis may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6741] [evidence IDA]; The chemical reactions and pathways resulting in the formation of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; biosynthesis may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6741] [evidence IMP]; The appearance of interleukin-10 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 32613] [evidence IMP]; The appearance of interleukin-12 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 32615] [evidence IMP]; The decrease in blood vessel diameter as a result of the release of angiotensin into the blood stream [goid 1998] [evidence IMP]; The process that increases the size of a blood vessel via the renin-angiotensin system [goid 2033] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule [goid 19322] [evidence IMP]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule [goid 19322] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule [goid 19322] [evidence IDA]	Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IMP]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IMP]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IDA]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IMP]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IDA]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IMP]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IDA]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IMP]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	G6pd; G28A; Gpdx	G6pd; G28A; Gpdx
Mus musculus	Riken	ILMN_202542	ILMN_202542	RBL1	ri|2700054A06|ZX00082L23|AK012418|1113					AK012418	Rbl1		ILMN_1236935	000620170	S	895	TGTGAATACAGAAGATGGGGCACACGCTGCAGTAAGCATTTAGCCAGAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221130	ILMN_230817	6430527G18RIK	NM_145836.1	NM_145836.1		238330	22003883	NM_145836.1	6430527G18Rik	NP_665835.1	ILMN_2754183	001070187	S	3590	TGTTATGCACTCTGAAAGGAAAACACACAAAAGAAGAGATTTTGTCGTTT	12	-	88222122-88222171	12qD2	Mus musculus RIKEN cDNA 6430527G18 gene (6430527G18Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_230817	ILMN_230817	6430527G18RIK	NM_145836.1	NM_145836.1		238330	22003883	NM_145836.1	6430527G18Rik	NP_665835.1	ILMN_3109491	005860725	A	3530	GCCTAGGTACAGAATTAATAGCCCTTAGCAACGACTGCTGCTGGTGTGTA	12	-	88222182-88222231	12qD2	Mus musculus RIKEN cDNA 6430527G18 gene (6430527G18Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221374	ILMN_221374	RBKS	NM_153196.1	NM_153196.1		71336	23397418	NM_153196.1	Rbks	NP_694876.1	ILMN_2806720	003180180	S	695	GCTGCCAGGTTGTGGTCATCACCTTAGGGGCTTCAGGATGCGTGATACTG	5	-	31950156-31950205	5qB1	Mus musculus ribokinase (Rbks), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	RBSK; 5230400M11Rik; AI326806	RBSK; 5230400M11Rik; AI326806
Mus musculus	RefSeq	ILMN_194540	ILMN_194540	ZSWIM2	NM_027964.2	NM_027964.2		71861	141803525	NM_027964.2	Zswim2	NP_082240.1	ILMN_1226376	003520431	S	1832	CCATGGGGAAAGTTAGACAAAAACTTGGTCATCCACCCAGACGACCTGCG	2	-	83755416-83755465	2qD	Mus musculus zinc finger, SWIM domain containing 2 (Zswim2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700025P14Rik; 4933437F18Rik; MEX	1700025P14Rik; 4933437F18Rik; MEX
Mus musculus	RefSeq	ILMN_210192	ILMN_210192	LDHA	NM_010699.1	NM_010699.1		16828	6754523	NM_010699.1	Ldha	NP_034829.1	ILMN_1257965	003190685	S	1410	CCAACTGCAGGCTTCGATTACCCCTGTGAGCCTGCTGCATTGCTGCCCTG	7	+	54110722-54110771	7qB4	Mus musculus lactate dehydrogenase A (Ldha), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA];  [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IDA]; Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IMP]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Ldh-1; Ldh1; LDH-A; l7R2	Ldh-1; Ldh1; LDH-A; l7R2
Mus musculus	MEEBO	ILMN_223251	ILMN_223251	RAB6B	scl0270192.9_201	NM_173781.3			40254255	NM_173781.3	Rab6b		ILMN_2761430	003060600	S	4536	TAGCAACGAAGGCCAGCCTGCCATTGTGATGTGTTGACTTCTCACCTCAC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199447	ILMN_242666	XKR4	NM_001011874.1	NM_001011874.1		497097	59858538	NM_001011874.1	Xkr4	NP_001011874.1	ILMN_2535238	003140315	S	1053	GCTGCATCTGCTAGCCACTTTTCTGGAAAGTGCTCCACAATTGGTCCTGC	1	-	3411827-3411876	1qA1	Mus musculus X Kell blood group precursor related family member 4 (Xkr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AY534250; XRG4; KIAA1889; mKIAA1889	AY534250; XRG4; KIAA1889; mKIAA1889
Mus musculus	RefSeq	ILMN_196881	ILMN_242666	XKR4	NM_001011874.1	NM_001011874.1		497097	59858538	NM_001011874.1	Xkr4	NP_001011874.1	ILMN_1258056	002970241	S	859	AGCGGCAAACACAGGTCTGCGTCCTGCTCCTTTTGCATCTGGCTCCTGCA	1	-	3660671-3660720	1qA1	Mus musculus X Kell blood group precursor related family member 4 (Xkr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AY534250; XRG4; KIAA1889; mKIAA1889	AY534250; XRG4; KIAA1889; mKIAA1889
Mus musculus	RefSeq	ILMN_242666	ILMN_242666	XKR4	NM_001011874.1	NM_001011874.1		497097	59858538	NM_001011874.1	Xkr4	NP_001011874.1	ILMN_3142763	005220731	A	2024	CTCCTCCAAGGCTGCAGTACAAGGATGATGCCCTTATTCAGGAGAGGCTG	1	-	3206123-3206172	1qA1	Mus musculus X Kell blood group precursor related family member 4 (Xkr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AY534250; XRG4; KIAA1889; mKIAA1889	AY534250; XRG4; KIAA1889; mKIAA1889
Mus musculus	Riken	ILMN_202934	ILMN_202934	A030010B06RIK	ri|A030010B06|PX00063G04|AK037209|1453					AK037209	A030010B06Rik		ILMN_2553437	004150315	S	842	GGCAGATGATCCATGCAGAGAAAGGAGATGCATTCCCAGGACACCTTGGG										
Mus musculus	RefSeq	ILMN_222018	ILMN_232599	SDF2L1	NM_022324.2	NM_022324.2		64136	31982679	NM_022324.2	Sdf2l1	NP_071719.1	ILMN_1221943	003360010	S	386	ACCGGCAAGAACCTGCACACGCACCACTTCCCGTCGCCGCTATCCAACAA	16	-	17131693-17131742	16qA3	Mus musculus stromal cell-derived factor 2-like 1 (Sdf2l1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_199258	ILMN_311950	EG625648	XR_034740.1	XR_034740.1		625648	149255351	XR_034740.1	EG625648		ILMN_1227942	006840142	S	991	CAGTACAAAGTGCTGAAAGCTCACTACAAAATCCATACAGGACAGAAACC	6	-	130987666-130987715	6qF3	PREDICTED: Mus musculus predicted gene, EG625648 (EG625648), misc RNA.					
Mus musculus	RefSeq	ILMN_222525	ILMN_222525	FYCO1	NM_148925.1	NM_148925.1		17281	22779867	NM_148925.1	Fyco1	NP_683727.1	ILMN_2750912	005860333	S	7732	CGAAGGGATGAGACTGGGATCCCTGAGTAAACTTCTTTAATAGTGTGTGC	9	-	123698693-123698742	9qF4	Mus musculus FYVE and coiled-coil domain containing 1 (Fyco1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RUFY3; ZFYVE7; Mem2; 2810409M01Rik	RUFY3; ZFYVE7; Mem2; 2810409M01Rik
Mus musculus	Riken	ILMN_205862	ILMN_205862	B230333E16RIK	ri|B230333E16|PX00160H15|AK046010|2659					AK046010	B230333E16Rik		ILMN_2575779	003370168	S	2123	GGAGTGGAAACTGGAGGGCAGTTTCTGGACGGTTTTCTAAGAAACTTCTG										
Mus musculus	Riken	ILMN_206982	ILMN_206982	5031411O12RIK	ri|5031411O12|PX00642D23|AK077241|1986					AK077241	5031411O12Rik		ILMN_2584151	000110367	S	1930	GGGGTTTGGTTCTGTCTGGGAATCTCAAGTAAAGAGGGAGCTCTGAGGGC										
Mus musculus	RefSeq	ILMN_208826	ILMN_312862	LOC100041187	XM_001475935.1	XM_001475935.1		100041187	149257620	XM_001475935.1	LOC100041187	XP_001475985.1	ILMN_2589902	001050113	S	191	AGCCCATGTTCTACTTTCTTGCCCTCCTCTCTTTCATTGATCTTGGCCTC	7	+	110458412-110458461	7qE3	PREDICTED: Mus musculus similar to olfactory receptor MOR32-2 (LOC100041187), mRNA.					
Mus musculus	Riken	ILMN_205244	ILMN_205244	E230024F15RIK	ri|E230024F15|PX00210C17|AK054163|1783					AK054163	E230024F15Rik		ILMN_2571081	002230435	S	1536	GGTTTCTAAGAATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCC										
Mus musculus	RefSeq	ILMN_211325	ILMN_211325	FAT4	NM_183221.3	NM_183221.3		329628	153792705	NM_183221.3	Fat4	NP_899044.3	ILMN_1226274	002970161	S	15752	CCTATGCAGGCCCTAATTGGTTTTATTTTCTATCCATTCAACATTTACCC				3qB	Mus musculus FAT tumor suppressor homolog 4 (Drosophila) (Fat4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9430004M15; 6030410K14Rik	9430004M15; 6030410K14Rik
Mus musculus	RefSeq	ILMN_218539	ILMN_218539	DCP1A	NM_133761.2	NM_133761.2		75901	46048280	NM_133761.2	Dcp1a	NP_598522.2	ILMN_2783438	000450070	S	2742	AGCAGGAGAGATGTGCAATGTTTCAATAGGATTCCGATTTGACTTCACTC	14	+	29355613-29355662	14qB	Mus musculus decapping enzyme (Dcp1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]	1110066A22Rik; D14Ertd817e; Mitc1; 4930568L04Rik; AU019772; SMIF	1110066A22Rik; D14Ertd817e; Mitc1; 4930568L04Rik; AU019772; SMIF
Mus musculus	RefSeq	ILMN_218539	ILMN_218539	DCP1A	NM_133761.2	NM_133761.2		75901	46048280	NM_133761.2	Dcp1a	NP_598522.2	ILMN_2783429	004900541	S	2890	GCTGTACGTGCTGAGTGGTCTTATTCTCTACTGCTTCGGCGTGGGGCTCC	14	+	29355761-29355810	14qB	Mus musculus decapping enzyme (Dcp1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]	1110066A22Rik; D14Ertd817e; Mitc1; 4930568L04Rik; AU019772; SMIF	1110066A22Rik; D14Ertd817e; Mitc1; 4930568L04Rik; AU019772; SMIF
Mus musculus	RefSeq	ILMN_217985	ILMN_217985	TGM5	NM_028799.2	NM_028799.2		74176	142368844	NM_028799.2	Tgm5	NP_083075.1	ILMN_2740782	004760326	S	451	CCTGAAAATTCGGATCGACTCCTACCAGGGTTTTGTCACTGCCTACCAGC	2	-	120902564-120902613	2qE5	Mus musculus transglutaminase 5 (Tgm5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC143848; 2310007C07Rik; TGMX; TGx; MGC143849	MGC143848; 2310007C07Rik; TGMX; TGx; MGC143849
Mus musculus	RefSeq	ILMN_196576	ILMN_196576	BB075781	NM_177639.2	NM_177639.2			31342213	NM_177639.2	BB075781		ILMN_1220639	000620670	S	2529	TGGCCTGATGCAAACTGTATAGTCCAGGCTAGCCCTGAGATCCACCTGCC										
Mus musculus	Riken	ILMN_207113	ILMN_207113	8030402P03RIK	ri|8030402P03|PX00650F12|AK078743|1748					AK078743	8030402P03Rik		ILMN_2585137	002190424	S	1571	CAGGCATGTCCACGTCAGGCTTAGCAGTATGTTTTTAAGAGGCCAGTGAG										
Mus musculus	MEEBO	ILMN_195984	ILMN_195984	D230012E17RIK	scl16753.12.1_7				31342049	NM_175508	D230012E17Rik		ILMN_1253405	006450491	S	2725	GACTAGGTCTATTTGGCATGAGAGGATGTTAGTGATAAAAGGCCCCTAGG										
Mus musculus	MEEBO	ILMN_195984	ILMN_195984	D230012E17RIK	scl16753.12.1_7				31342049	NM_175508	D230012E17Rik		ILMN_2520534	005290022	S	2	GGGTTGATTTGTCATGGAAAGCTGAGCTGTTACCAACAATTAAGGTAAAC										
Mus musculus	RefSeq	ILMN_198639	ILMN_198639	LOC213449	XM_142043.2	XM_142043.2			28529146	XM_142043.2	LOC213449		ILMN_1215840	000940521	S	1037	CTTGCTTTTACCAACCTGCTCCATACCTAGTTCTTGAGGGAGGGTACCCC										
Mus musculus	RefSeq	ILMN_222557	ILMN_222557	POLR2J	NM_011293.1	NM_011293.1		20022	6755361	NM_011293.1	Polr2j	NP_035423.1	ILMN_1239525	006660356	S	369	AGCAGCTGAAAGAAGCGTTGCTTAGTGGCTGGAAGGCTGGCACATACTCC	5	+	136598646-136598647:136598648-136598695	5qG2	Mus musculus polymerase (RNA) II (DNA directed) polypeptide J (Polr2j), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5666] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rpo2-4; Polr2i; Rpb11a; 14.5kDa	Rpo2-4; Polr2i; Rpb11a; 14.5kDa
Mus musculus	RefSeq	ILMN_211680	ILMN_319248	LOC100042179	XM_001477683.1	XM_001477683.1		100042179	149260743	XM_001477683.1	LOC100042179	XP_001477733.1	ILMN_2618461	003840376	S	113	AGATCATTGTGATGGGTGTGCAGGTGGTGGGCAGAGCCTTTGCCAGGGCC	10	+	43243993-43244042	10qB2	PREDICTED: Mus musculus similar to mitochondria-associated granulocyte macrophage CSF signaling molecule (LOC100042179), mRNA.					
Mus musculus	RefSeq	ILMN_220955	ILMN_220955	SLC4A2	NM_009207.2	NM_009207.2		20535	141802444	NM_009207.2	Slc4a2	NP_033233.1	ILMN_1239662	003800333	S	4030	TTAAGTGAATAATTTAAAGCCCCCTTCTCCCTATCCTGCAGTAAAGTGCT	5	+	23946706-23946755	5qA3	Mus musculus solute carrier family 4 (anion exchanger), member 2 (Slc4a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA];  [goid 15380] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 5452] [evidence IEA]	B3RP; Ae2	B3RP; Ae2
Mus musculus	RefSeq	ILMN_222250	ILMN_222250	PATL1	NM_172635.2	NM_172635.2		225929	141802695	NM_172635.2	Patl1	NP_766223.1	ILMN_1230790	000360215	S	3784	ACCAGCTGTCTTTGTACTCATCTCCATTTCTTCTCATTTTGTGGCCTCGG	19	+	12019186-12019235	19qA	Mus musculus protein associated with topoisomerase II homolog 1 (yeast) (Patl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			D430024J04	D430024J04
Mus musculus	RefSeq	ILMN_193507	ILMN_232591	PROZ	NM_025834.3	NM_025834.3		66901	118130262	NM_025834.3	Proz	NP_080110.1	ILMN_2736621	006620369	S	2074	CCTGTGACCTCCCCAGTCACAAGCTTTTGGCCGAGATTATAGCTTCAGGC	8	+	13074682-13074731	8qA1.1	Mus musculus protein Z, vitamin K-dependent plasma glycoprotein (Proz), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IDA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]	1300015B06Rik	1300015B06Rik
Mus musculus	RefSeq	ILMN_211652	ILMN_211652	CALCOCO1	NM_026192.2	NM_026192.2		67488	118129828	NM_026192.2	Calcoco1	NP_080468.1	ILMN_1223327	001170338	S	905	ACAAACGGTCCGAGAGGAGAACTGCTGCTTAAATACAGAGCTGGAGGAGG	15	-	102541871-102541920	15qF3	Mus musculus calcium binding and coiled coil domain 1 (Calcoco1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any series of molecular signals generated as a consequence of a steroid hormone binding to its receptor [goid 30518] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	mKIAA1536; KIAA1536; Cocoa; 1810009B06Rik	mKIAA1536; KIAA1536; Cocoa; 1810009B06Rik
Mus musculus	RefSeq	ILMN_211652	ILMN_211652	CALCOCO1	NM_026192.2	NM_026192.2		67488	118129828	NM_026192.2	Calcoco1	NP_080468.1	ILMN_1241128	001440113	S	2381	GGAACCAGGATGGAGATGACTTTCCCTTGCGGGAATAGAATTATTCCCAC	15	-	102537492-102537541	15qF3	Mus musculus calcium binding and coiled coil domain 1 (Calcoco1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any series of molecular signals generated as a consequence of a steroid hormone binding to its receptor [goid 30518] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	mKIAA1536; KIAA1536; Cocoa; 1810009B06Rik	mKIAA1536; KIAA1536; Cocoa; 1810009B06Rik
Mus musculus	RefSeq	ILMN_188466	ILMN_227596	IMPA2	NM_053261.2	NM_053261.2		114663	118131116	NM_053261.2	Impa2	NP_444491.1	ILMN_2662160	000290575	S	1031	CTACGGCCGAGACGATGAGAAGTGAGCCACACACAGCTCGAAGGCTAAAA	18	+	67478140-67478164:67478165-67478189	18qE1	Mus musculus inositol (myo)-1(or 4)-monophosphatase 2 (Impa2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: myo-inositol 1-phosphate + H2O = myo-inositol + phosphate [goid 8934] [evidence ISA]	AI326924; AW259601; 2210415D20Rik	AI326924; AW259601; 2210415D20Rik
Mus musculus	MEEBO	ILMN_213893	ILMN_213893	GM711	scl0279029.18_3	NM_198628.1			38348497	NM_198628.1	Gm711		ILMN_2641920	004590079	S	1861	CCAGAGATGGAGTCTGGAGGCATCAAAGACCTAGTCCAGGTGATCCGGGG							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185279	ILMN_185279	A930009E05RIK	scl30159.2_384				51711922	XM_489135	A930009E05Rik		ILMN_2425691	006350671	S	20	TCTGGAAACTCTTGTGATATTCCGAGAGGAACTTACCAGGGAAGTGGGAG										
Mus musculus	RefSeq	ILMN_212842	ILMN_212842	KIF18A	NM_139303.1	NM_139303.1		228421	21314851	NM_139303.1	Kif18a	NP_647464.1	ILMN_2911781	003180164	S	3158	CTTTAGAAGTCATAGTTATGGCCAAGATGTATTTGGTCTTCTGCTGTGTG	2	+	109181693-109181742	2qE3	Mus musculus kinesin family member 18A (Kif18a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	MGC27627; AU024633; B130001M12Rik	MGC27627; AU024633; B130001M12Rik
Mus musculus	RefSeq	ILMN_212842	ILMN_212842	KIF18A	NM_139303.1	NM_139303.1		228421	21314851	NM_139303.1	Kif18a	NP_647464.1	ILMN_1212799	003990296	S	2937	TGCTCAAATATTTTCAGCAAGCAAAATGAAACTTCTTTTGTATTTAAAAT	2	+	109181472-109181521	2qE3	Mus musculus kinesin family member 18A (Kif18a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	MGC27627; AU024633; B130001M12Rik	MGC27627; AU024633; B130001M12Rik
Mus musculus	Riken	ILMN_204538	ILMN_204538	GABRG3	ri|B230397N23|PX00161J08|AK046483|1498					AK046483	Gabrg3		ILMN_2565748	002970292	S	1100	CCAGCTGTGGTGTGCCTCCTGATTAGATGATGTAGAAGTCCCATAGCAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214902	ILMN_214902	CTNS	NM_031251.4	NM_031251.4		83429	146149070	NM_031251.4	Ctns	NP_112541.1	ILMN_2653284	002680561	S	2363	CTACGCCAGGTAGGGAAGGAACCAGGGTGTGCCTTGAGTTTATCAATCTG				11qB4	Mus musculus cystinosis, nephropathic (Ctns), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [evidence IMP]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [evidence IDA]	Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [evidence IMP]; Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [evidence IDA]	AW049661; AI195360	AW049661; AI195360
Mus musculus	Riken	ILMN_202538	ILMN_202538	RFC5	ri|2610209F07|ZX00082D07|AK011931|707					AK011931	Rfc5		ILMN_2550370	005390270	S	299	CACTCTCACTCCACAACAGCTCAGACCTCCAGACACTTAACCTTTGTCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186224	ILMN_259201	ENTPD5	NM_007647.2	NM_007647.2		12499	71061459	NM_007647.2	Entpd5	NP_031673.2	ILMN_1215096	001240731	S	1820	CCCTGGGGACCAAAGAACAATCTCGTTTCAACCCTTGGATGCCTCATTGC	12	-	85717854-85717903	12qD1	Mus musculus ectonucleoside triphosphate diphosphohydrolase 5 (Entpd5), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]	NTPDase-5; Pcph; mNTPase; AI987697; AI196558; Cd39l4; ER-UDPase; NTPDase5	NTPDase-5; Pcph; mNTPase; AI987697; AI196558; Cd39l4; ER-UDPase; NTPDase5
Mus musculus	RefSeq	ILMN_186224	ILMN_259201	ENTPD5	NM_007647.2	NM_007647.2		12499	71061459	NM_007647.2	Entpd5	NP_031673.2	ILMN_2433685	007650070	S	4836	GTGAGGGAGAACATCTTGGAGATTCCTTTGTTTGTGTAGTAATAAAAAGC	12	-	85714838-85714887	12qD1	Mus musculus ectonucleoside triphosphate diphosphohydrolase 5 (Entpd5), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]	NTPDase-5; Pcph; mNTPase; AI987697; AI196558; Cd39l4; ER-UDPase; NTPDase5	NTPDase-5; Pcph; mNTPase; AI987697; AI196558; Cd39l4; ER-UDPase; NTPDase5
Mus musculus	RefSeq	ILMN_212743	ILMN_212743	PCSK4	NM_008793.1	NM_008793.1		18551	33469094	NM_008793.1	Pcsk4	NP_032819.1	ILMN_1252464	006510403	S	2361	CCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGC	10	-	79784131-79784180	10qC1	Mus musculus proprotein convertase subtilisin/kexin type 4 (Pcsk4), mRNA.	The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization [goid 2080] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IMP]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	AI647044; SPC5; L21221; 0710008O07; MGC63195; PC4	AI647044; SPC5; L21221; 0710008O07; MGC63195; PC4
Mus musculus	RefSeq	ILMN_212743	ILMN_212743	PCSK4	NM_008793.1	NM_008793.1		18551	33469094	NM_008793.1	Pcsk4	NP_032819.1	ILMN_2629776	000360678	S	1606	GCGGCCAAGGCTACAACAACTGGATCTTCATGTCCACTCACTACTGGGAT	10	-	79785529-79785578	10qC1	Mus musculus proprotein convertase subtilisin/kexin type 4 (Pcsk4), mRNA.	The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization [goid 2080] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IMP]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	AI647044; SPC5; L21221; 0710008O07; MGC63195; PC4	AI647044; SPC5; L21221; 0710008O07; MGC63195; PC4
Mus musculus	RefSeq	ILMN_212743	ILMN_212743	PCSK4	NM_008793.1	NM_008793.1		18551	33469094	NM_008793.1	Pcsk4	NP_032819.1	ILMN_1245529	001260564	S	1603	CAGCGGCCAAGGCTACAACAACTGGATCTTCATGTCCACTCACTACTGGG	10	-	79785532-79785581	10qC1	Mus musculus proprotein convertase subtilisin/kexin type 4 (Pcsk4), mRNA.	The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization [goid 2080] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IMP]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	AI647044; SPC5; L21221; 0710008O07; MGC63195; PC4	AI647044; SPC5; L21221; 0710008O07; MGC63195; PC4
Mus musculus	RefSeq	ILMN_212743	ILMN_212743	PCSK4	NM_008793.1	NM_008793.1		18551	33469094	NM_008793.1	Pcsk4	NP_032819.1	ILMN_2860850	001450343	S	2145	GGAAGGCCCACCTGCCCCAGGCTAGATACCCCAGTGCCCAAAACCATGCA	10	-	79784347-79784396	10qC1	Mus musculus proprotein convertase subtilisin/kexin type 4 (Pcsk4), mRNA.	The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization [goid 2080] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IMP]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	AI647044; SPC5; L21221; 0710008O07; MGC63195; PC4	AI647044; SPC5; L21221; 0710008O07; MGC63195; PC4
Mus musculus	RefSeq	ILMN_212743	ILMN_212743	PCSK4	NM_008793.1	NM_008793.1		18551	33469094	NM_008793.1	Pcsk4	NP_032819.1	ILMN_1235149	004390497	S	641	CACAGCTAACAACGGTTTCTGTGGTGCCGGTGTGGCCTTCAATGCTAGAA	10	-	79788333-79788382	10qC1	Mus musculus proprotein convertase subtilisin/kexin type 4 (Pcsk4), mRNA.	The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization [goid 2080] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IMP]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	AI647044; SPC5; L21221; 0710008O07; MGC63195; PC4	AI647044; SPC5; L21221; 0710008O07; MGC63195; PC4
Mus musculus	RefSeq	ILMN_251755	ILMN_251755	XLR5C	NM_031493.1	NM_031493.1		27084	13994145	NM_031493.1	Xlr5c	NP_113681.1	ILMN_2962153	002140326	S	3	GTCAAACAAGGAACAGAAGGACATGAAGAAAAGTGGCAAGCACCAGAGGG	X	-	70535804-70535853	XqA7.3	Mus musculus X-linked lymphocyte-regulated 5C (Xlr5c), mRNA.				MGC141130; Xlr5	MGC141130; Xlr5
Mus musculus	RefSeq	ILMN_207348	ILMN_252844	9630025I21RIK	NM_001076791.2	NM_001076791.2		408067	134053901	NM_001076791.2	9630025I21Rik	NP_001070259.1	ILMN_1247465	006200300	S	3715	GCTGTGGCTGATGGGGTCCTGGGGTGTATGCTCAATAAACTGTCCCTGTC	13	-	67572456-67572505	13qB3	Mus musculus RIKEN cDNA 9630025I21 gene (9630025I21Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rslcan16	Rslcan16
Mus musculus	Riken	ILMN_207359	ILMN_207359	C030024F02RIK	ri|C030024F02|PX00665F08|AK081244|2545					AK081244	C030024F02Rik		ILMN_1214312	005360397	S	2281	GTAGGTGATGGGGTCTGTGTGCTCTTAACTGAGCCATATCTCCAGTCTCC										
Mus musculus	RefSeq	ILMN_209064	ILMN_209064	2310011J03RIK	NM_025521.3	NM_025521.3		66374	114051827	NM_025521.3	2310011J03Rik	NP_079797.1	ILMN_1219918	005960504	S	1196	TGATGCCTGAACACAGTTCTCCCTTAAGCCAGGCTAGATCACTGGGTACC	10	-	79781413-79781462	10qC1	Mus musculus RIKEN cDNA 2310011J03 gene (2310011J03Rik), mRNA.				AW545358; AI452186	AW545358; AI452186
Mus musculus	RefSeq	ILMN_218196	ILMN_218196	CHCHD6	NM_025351.2	NM_025351.2		66098	27754145	NM_025351.2	Chchd6	NP_079627.2	ILMN_2801746	007330725	S	904	CTTCCTGGAGCCTTGAAGAAGGGACCGATCATAGGACCACAGACCATGGC	6	-	89333275-89333324	6qD1	Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 6 (Chchd6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700021B03Rik; 0710001P09Rik	1700021B03Rik; 0710001P09Rik
Mus musculus	RefSeq	ILMN_191630	ILMN_191630	ZMYND19	NM_026021.3	NM_026021.3		67187	146135061	NM_026021.3	Zmynd19	NP_080297.1	ILMN_1247607	007000196	S	1096	TTTCTCATTATTTATATGTTAATATGTTTGTAAACTCATGTACAGTTTTT				2qA3	Mus musculus zinc finger, MYND domain containing 19 (Zmynd19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AU014915; 2700064H14Rik; mizip; AA536891	AU014915; 2700064H14Rik; mizip; AA536891
Mus musculus	RefSeq	ILMN_214488	ILMN_214488	SLC13A1	NM_019481.1	NM_019481.1		55961	9507108	NM_019481.1	Slc13a1	NP_062354.1	ILMN_2648523	005130092	S	2148	TAACATTGCAAACATCAACTTATTATTTGAAAATATTTTCTTATGAAACT	6	-	24038580-24038629	6qA3.1	Mus musculus solute carrier family 13 (sodium/sulphate symporters), member 1 (Slc13a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IDA]	Nas1; NaSi-1; AI314066; AI987826	Nas1; NaSi-1; AI314066; AI987826
Mus musculus	RefSeq	ILMN_197777	ILMN_197777	LOC381019	XM_354925.1	XM_354925.1			38077936	XM_354925.1	LOC381019		ILMN_1252338	005090202	S	1431	AGACAGATCATGCCTGGGGGAGGCCCTGGCCCGCATGGAGCTCTTCCTCT										
Mus musculus	RefSeq	ILMN_222681	ILMN_222681	TBC1D23	NM_026254.2	NM_026254.2		67581	27754078	NM_026254.2	Tbc1d23	NP_080530.2	ILMN_2879876	001400639	S	3288	CCAAGGGGTTGGTTGATAGAAATATCTAGATGTACCCCACCAGTAGCCAG	16	-	57169289-57169338	16qC1.1	Mus musculus TBC1 domain family, member 23 (Tbc1d23), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D030022P07Rik; AU015720; 4930451A13Rik; AU043671; W51689; AU043778	D030022P07Rik; AU015720; 4930451A13Rik; AU043671; W51689; AU043778
Mus musculus	RefSeq	ILMN_220604	ILMN_254137	FER1L4	XM_976935.1	XM_976935.1		74562	94368914	XM_976935.1	Fer1l4	XP_982029.1	ILMN_2724298	005960215	S	5726	CCATCCCCGGACAGATCAGCGAGGTCATCTTCAGCCCCGTCCACAAACAT				2qH1	PREDICTED: Mus musculus fer-1-like 4 (C. elegans) (Fer1l4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_210297	ILMN_210297	4933407N01RIK	scl0001501.1_75	NM_025745.2			31981197	NM_025745.2	4933407N01Rik		ILMN_1252437	003420528	S	1361	AATCAGACTCTCCTCATGCTGTCACTGTGTATATGCTAGAGCCTCACTCG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210297	ILMN_210297	4933407N01RIK	scl0001501.1_75	NM_025745.2			31981197	NM_025745.2	4933407N01Rik		ILMN_2653735	005290402	S	1360	GAATCAGACTCTCCTCATGCTGTCACTGTGTATATGCTAGAGCCTCACTC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210297	ILMN_210297	4933407N01RIK	scl0001501.1_75	NM_025745.2			31981197	NM_025745.2	4933407N01Rik		ILMN_2604205	006580274	S	1013	GAACAACCCACATTTCCAAGCTGACAGATGACCAGCTCATCAAGGAGTTC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211600	ILMN_211600	ST6GALNAC4	NM_011373.2	NM_011373.2		20448	56711335	NM_011373.2	St6galnac4	NP_035503.1	ILMN_1259566	000940138	S	579	GCGCAACTACTCACACTATTTCCAGCATGCCCGAGACACGCTCTACGTGG	2	+	32449710-32449759	2qB	Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 (St6galnac4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R + CMP-N-acetylneuraminate = alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-(alpha-N-acetylneuraminyl-2,6)-N-acetyl-D-galactosaminyl-R + CMP [goid 47290] [evidence IEA]	MGC102103; Siat7d	MGC102103; Siat7d
Mus musculus	RefSeq	ILMN_211600	ILMN_211600	ST6GALNAC4	NM_011373.2	NM_011373.2		20448	56711335	NM_011373.2	St6galnac4	NP_035503.1	ILMN_1248439	003310187	S	3474	GGAAATGCTGACCCAACCCTTAGACAAGGCACACAGAGATGCTTCTGTCC	2	+	32455108-32455157	2qB	Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 (St6galnac4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R + CMP-N-acetylneuraminate = alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-(alpha-N-acetylneuraminyl-2,6)-N-acetyl-D-galactosaminyl-R + CMP [goid 47290] [evidence IEA]	MGC102103; Siat7d	MGC102103; Siat7d
Mus musculus	RefSeq	ILMN_211600	ILMN_211600	ST6GALNAC4	NM_011373.2	NM_011373.2		20448	56711335	NM_011373.2	St6galnac4	NP_035503.1	ILMN_2660837	002340241	S	843	CCTGGAGCTGTGCGAGGAGATCGTGGTCTACGGGATGGTCAGCGATAGTT	2	+	32451265-32451314	2qB	Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 (St6galnac4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R + CMP-N-acetylneuraminate = alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-(alpha-N-acetylneuraminyl-2,6)-N-acetyl-D-galactosaminyl-R + CMP [goid 47290] [evidence IEA]	MGC102103; Siat7d	MGC102103; Siat7d
Mus musculus	RefSeq	ILMN_211600	ILMN_211600	ST6GALNAC4	NM_011373.2	NM_011373.2		20448	56711335	NM_011373.2	St6galnac4	NP_035503.1	ILMN_2617542	006560692	S	127	CTCATCCCAAGCACTGGAGACAGCAGCCTCCAGACTGCTAAGAGCAGAGA	2	+	32443136-32443185	2qB	Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 (St6galnac4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R + CMP-N-acetylneuraminate = alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,3-(alpha-N-acetylneuraminyl-2,6)-N-acetyl-D-galactosaminyl-R + CMP [goid 47290] [evidence IEA]	MGC102103; Siat7d	MGC102103; Siat7d
Mus musculus	RefSeq	ILMN_216388	ILMN_246554	RBM9	NM_175387.2	NM_175387.2		93686	118129875	NM_175387.2	Rbm9	NP_780596.1	ILMN_2670527	002030091	S	1388	CAGCCCCCAGTTCATGAGGCCTGGCTATTGCAATATTTACTAGTAGAGGA	15	-	76914514-76914563	15qD3-qE1	Mus musculus RNA binding motif protein 9 (Rbm9), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Fbm2; AI118529; AA407676; 2810460A15Rik; Hrnbp2; Fxh	Fbm2; AI118529; AA407676; 2810460A15Rik; Hrnbp2; Fxh
Mus musculus	RefSeq	ILMN_195326	ILMN_315154	MAGI1	NM_001083321.1	NM_001083321.1		14924	134031961	NM_001083321.1	Magi1	NP_001076790.1	ILMN_1254922	002650687	S	2206	CGCCTGCATCAGGATTGAGCAAGGGTGAAAGAGACAGAGAAATCAATTCC	6	-	93654292-93654341	6qD1	Mus musculus membrane associated guanylate kinase, WW and PDZ domain containing 1 (Magi1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MAGI1c; TNRC19; KIAA4129; BAP1; Magi-1; WWP3; Gukmi1; Baiap1; mKIAA4129; AIP3	MAGI1c; TNRC19; KIAA4129; BAP1; Magi-1; WWP3; Gukmi1; Baiap1; mKIAA4129; AIP3
Mus musculus	MEEBO	ILMN_191690	ILMN_191690	KIST	scl17247.1_384				40254329	NM_010633	Kist		ILMN_2753233	004220491	S	1632	CACCCATGTGGCCACCCTTTATTTGTGCAGTAGGGCAGGTGCTGCTCTTT										
Mus musculus	MEEBO	ILMN_191690	ILMN_191690	KIST	scl17247.1_384				40254329	NM_010633	Kist		ILMN_2753234	005900239	S	1634	CCCATGTGGCCACCCTTTATTTGTGCAGTAGGGCAGGTGCTGCTCTTTAC										
Mus musculus	RefSeq	ILMN_216979	ILMN_216979	ABHD3	NM_134130.1	NM_134130.1		106861	19527359	NM_134130.1	Abhd3	NP_598891.1	ILMN_2677728	000150255	S	1135	GTTTTCTGGAGGGAATCTGGCCTAGGCAATGCACTTACATGGATCGAGTC	18	-	10645111-10645160	18qA1	Mus musculus abhydrolase domain containing 3 (Abhd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	LABH3; AA675331	LABH3; AA675331
Mus musculus	RefSeq	ILMN_212296	ILMN_225762	ZFP81	NM_207541.1	NM_207541.1		224694	126432559	NM_207541.1	Zfp81	NP_997424.1	ILMN_2624853	007150725	S	2114	TAAGCAAGAAATATTGTGAAGAAACAGAGGCAGTTTTTTGTAAACTCTTA	17	-	33470762-33470811	17qB1	Mus musculus zinc finger protein 81 (Zfp81), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Zfp78; KRAB13; Hszfp36; AA409460; C330034P10Rik; AA409461; D330034E10Rik	Zfp78; KRAB13; Hszfp36; AA409460; C330034P10Rik; AA409461; D330034E10Rik
Mus musculus	RefSeq	ILMN_186753	ILMN_186753	ZFP131	NM_028245.1	NM_028245.1		72465	21312281	NM_028245.1	Zfp131	NP_082521.1	ILMN_1258545	000380240	S	4	GTCTATCCAGTGGCTACAAATGTTGTCCCCACAACAGAAACGGTGGTGGC	13	+	31985-32008:32500-32514:32515-32525		Mus musculus zinc finger protein 131 (Zfp131), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW558871; 2610109I01Rik; Znf131	AW558871; 2610109I01Rik; Znf131
Mus musculus	MEEBO	ILMN_189305	ILMN_189305	SCL0001602.1_506	scl0001602.1_506	AK036186.1			26085072	AK036186.1	scl0001602.1_506		ILMN_2460102	006330315	S	19	TCCCGCCATGTTCAGAATGGCTTGGACTCAAATGTAAATGTACAGGGTGC										
Mus musculus	MEEBO	ILMN_191392	ILMN_191392	2010007H06RIK	scl069849.1_115						2010007H06Rik		ILMN_1252288	007650239	S	20	GAATATGAGTAACTCCGACCCATGCTGATGTGTATTTTGGAAGCTCTGCC										
Mus musculus	RefSeq	ILMN_193244	ILMN_255024	MED13	NM_001080931.1	NM_001080931.1		327987	124286861	NM_001080931.1	Med13	NP_001074400.1	ILMN_2495348	001300324	S	10980	AGTTATGATCATTTAAAAACTTTCTCCCAAGAGTTTCAAAAGCTTTCATA	11	-	86079974-86080023	11qC	Mus musculus mediator complex subunit 13 (Med13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]	1110067M05Rik; Trap240; D030023K18; Thrap1	1110067M05Rik; Trap240; D030023K18; Thrap1
Mus musculus	RefSeq	ILMN_255024	ILMN_255024	MED13	NM_001080931.1	NM_001080931.1		327987	124286861	NM_001080931.1	Med13	NP_001074400.1	ILMN_3055531	002450452	I	6	TTCCTCCTTCGTGTCGAACGGGGCCAGCCTGGAAGATTGTCACTGTAACC	11	-	86170972-86171021	11qC	Mus musculus mediator complex subunit 13 (Med13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]	1110067M05Rik; Trap240; D030023K18; Thrap1	1110067M05Rik; Trap240; D030023K18; Thrap1
Mus musculus	RefSeq	ILMN_217659	ILMN_255024	MED13	NM_001080931.1	NM_001080931.1		327987	124286861	NM_001080931.1	Med13	NP_001074400.1	ILMN_1256756	001190044	S	1061	GCTTCAGCACTGACAGTACTAGCCATCATGGTGGGAAAATACCCAGAAAA	11	-	86142010-86142059	11qC	Mus musculus mediator complex subunit 13 (Med13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]	1110067M05Rik; Trap240; D030023K18; Thrap1	1110067M05Rik; Trap240; D030023K18; Thrap1
Mus musculus	RefSeq	ILMN_198922	ILMN_198922	LOC235206	XM_146732.5	XM_146732.5			38089788	XM_146732.5	LOC235206		ILMN_1252427	006590452	S	555	TCCTCTCCTTCAACTTTCCTGCACCAGTACCTATGTCAATGAGGTTGTGG										
Mus musculus	MEEBO	ILMN_209220	ILMN_209220	9630020G10RIK	scl0320338.6_28	NM_177137.2			31342887	NM_177137.2	9630020G10Rik		ILMN_2739195	003940369	S	453	GAGGCGAGGAAAGTCAGCCGGGGCATCGACCGCATGCTGCGCGAGCAGAA										
Mus musculus	MEEBO	ILMN_209220	ILMN_209220	9630020G10RIK	scl0320338.6_28	NM_177137.2			31342887	NM_177137.2	9630020G10Rik		ILMN_1249430	006420053	S	2196	CTTTCTCTGTGAAGGTGAAACTCACAATAAAGCTGTTGTTGTATAAGAAG										
Mus musculus	Riken	ILMN_207025	ILMN_207025	9830140K13RIK	ri|9830140K13|PX00655A22|AK079410|873					AK079410	9830140K13Rik		ILMN_1258535	001740601	S	494	TATCCGCCCTGGGAGTTGGTCCCATTTGAGCCAGAGGATTGTGGGCTCCA										
Mus musculus	Riken	ILMN_207258	ILMN_207258	G630014P16RIK	ri|G630014P16|PL00012F24|AK090191|2964					AK090191	G630014P16Rik		ILMN_1240309	006520491	S	2720	ATTTTCAGGGTTGGGGTGTGGCCCAGCAGTGGAAGCTGGCCTGTCAGTCA										
Mus musculus	RefSeq	ILMN_207326	ILMN_242220	BB014433	NM_001007591.2	NM_001007591.2		434285	142381093	NM_001007591.2	BB014433	NP_001007592.1	ILMN_1234722	004280092	S	1525	CCTGGAGAGGGCCTTAGACTGCTGAGGGTAGATAGATGTTCAGGGTAGTG	8	-	15041622-15041671	8qA1.1	Mus musculus expressed sequence BB014433 (BB014433), mRNA.					
Mus musculus	MEEBO	ILMN_219202	ILMN_219202	PRPMP5	scl0056272.1_325	NM_019628.1			9790178	NM_019628.1	Prpmp5		ILMN_2705635	006650343	S	1098	GTGACCAGTAGACAGATGACTTCAATATCATCCTATAACACACTGATGTC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_200564	ILMN_200564	LOC384359	XM_357597.1	XM_357597.1			38083759	XM_357597.1	LOC384359		ILMN_1215843	004920465	S	246	CGTCTGTAGTCAGATGTCCTGTTGGAGTTTGAGGCATGGTAGGCCACGCA										
Mus musculus	RefSeq	ILMN_200144	ILMN_200144	LOC385634	XM_358815.1	XM_358815.1			38080655	XM_358815.1	LOC385634		ILMN_1233380	004250678	S	469	GGGCCACACCCAACAGACATGTTGATCACAGTGAAGGGAGAGAGGATGCT										
Mus musculus	RefSeq	ILMN_211589	ILMN_211589	NDUFA12	NM_025551.3	NM_025551.3		66414	146135031	NM_025551.3	Ndufa12	NP_079827.2	ILMN_1220362	001070376	S	205	GGCCGCCACCGATGGGTCATCTACACCACCGAGATGAACGGCAAAAACAC				10qC2	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 (Ndufa12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	MGC7999; 2410011G03Rik; MGC107642; AW112974	MGC7999; 2410011G03Rik; MGC107642; AW112974
Mus musculus	Riken	ILMN_206010	ILMN_206010	PBX1	ri|B130052B10|PX00158H12|AK045252|1597					AK045252	Pbx1		ILMN_2576865	006660630	S	1120	CTGGCCCCAACTCTTTTTGAAATTGGGGCTAAGGCAGAGGTTTGGACGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]		
Mus musculus	RefSeq	ILMN_250830	ILMN_250830	PPAPDC1A	NM_001080963.1	NM_001080963.1		381925	124377994	NM_001080963.1	Ppapdc1a	NP_001074432.1	ILMN_2778722	004210064	S	827	CCCCGTATGATGGGTGTCTAGGGAGAATGGACACTGAGCCCCTGGCACAT	7	+	136534560-136534569:136534570-136534609	7qF3	Mus musculus phosphatidic acid phosphatase type 2 domain containing 1A (Ppapdc1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Gm1090; C030048B12Rik	Gm1090; C030048B12Rik
Mus musculus	MEEBO	ILMN_191380	ILMN_191380	A430034D21RIK	scl14440.2.1_15						A430034D21Rik		ILMN_1250698	000050138	S	1	GGCGGGGGGAGTTCAGTCTGTCTAATGAATTCTTCACCCCTCATGTGGAC										
Mus musculus	RefSeq	ILMN_209961	ILMN_313135	LOC100044190	XM_001471649.1	XM_001471649.1		100044190	149269281	XM_001471649.1	LOC100044190	XP_001471699.1	ILMN_1214731	002230731	S	1642	CTGGGTCCTACCCTCAGTGCTTCAGGGACATTTAATCAGGTCAAATTGGG					PREDICTED: Mus musculus hypothetical protein LOC100044190 (LOC100044190), mRNA.					
Mus musculus	RefSeq	ILMN_213081	ILMN_313135	LOC100044190	XM_001471649.1	XM_001471649.1		100044190	149269281	XM_001471649.1	LOC100044190	XP_001471699.1	ILMN_2633386	000780221	S	1625	CTCTCACCCACAGCACTCTGGGTCCTACCCTCAGTGCTTCAGGGACATTT					PREDICTED: Mus musculus hypothetical protein LOC100044190 (LOC100044190), mRNA.					
Mus musculus	RefSeq	ILMN_208651	ILMN_208651	PROKR1	NM_021381.3	NM_021381.3		58182	40254342	NM_021381.3	Prokr1	NP_067356.2	ILMN_2612018	002370504	S	3964	CTGTCTGTAATTCTTCCAGATATTGGTGTCTCCTTGTGATTTCACAGTGA	6	-	87528628-87528677	6qD1	Mus musculus prokineticin receptor 1 (Prokr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence TAS]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]	EG-VEGFR1; Pkr1; Gpr73	EG-VEGFR1; Pkr1; Gpr73
Mus musculus	RefSeq	ILMN_208651	ILMN_208651	PROKR1	NM_021381.3	NM_021381.3		58182	40254342	NM_021381.3	Prokr1	NP_067356.2	ILMN_1228536	000070692	S	2697	GGCCTGAGAAAACCTGAGGCCTAGCTTTGACTAAGTCATCTACACAGACC	6	-	87529895-87529944	6qD1	Mus musculus prokineticin receptor 1 (Prokr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence TAS]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]	EG-VEGFR1; Pkr1; Gpr73	EG-VEGFR1; Pkr1; Gpr73
Mus musculus	MEEBO	ILMN_192825	ILMN_192825	SGSH	scl39256.8_299				31543696	NM_018822	Sgsh		ILMN_2491670	000450546	S	7	GAAACTTGATGGTTTACTGAGAGCTGTAAAATCTGAGTCTTAATGTCTTC						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	The chemical reactions and pathways involving any proteoglycan containing heparan sulfate, any member of a group of glycosaminoglycans that have repeat units consisting of alternating alpha1->4 linked hexuronic acid and glucosamine residues, the former being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids, and the latter being either sulfated or acetylated on its amino group as well as sulfated on one of its hydroxyl groups [goid 30201] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISS]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISA]; Catalysis of the reaction: N-sulfo-D-glucosamine + H2O = D-glucosamine + SO4(2-) (sulfate) [goid 16250] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188898	ILMN_231396	UBE2W	NM_025773.2	NM_025773.2		66799	141802798	NM_025773.2	Ube2w	NP_080049.1	ILMN_1223645	002230093	S	162	GGTGCACCAGGAACCTTATATGAAGGGGAAAAATTTCAACTTTTGTTTAA	1	-	16588065-16588114	1qA3	Mus musculus ubiquitin-conjugating enzyme E2W (putative) (Ube2w), mRNA. XM_906611 XM_919949 XM_919963 XM_919973 XM_919983 XM_989558 XM_989587 XM_989620 XM_989642 XM_989671		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	6130401J04Rik	6130401J04Rik
Mus musculus	RefSeq	ILMN_184733	ILMN_184733	TPP2	NM_009418.2	NM_009418.2		22019	141803002	NM_009418.2	Tpp2	NP_033444.1	ILMN_2421119	000730543	S	4589	GAATAAACGTGCAAAACCACAGGCACAGTACACCATATGCACTCTGATAC	1	+	44059756-44059805	1qC1.1	Mus musculus tripeptidyl peptidase II (Tpp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	TppII	TppII
Mus musculus	RefSeq	ILMN_219831	ILMN_240264	OLFR619	NM_147076.1	NM_147076.1		259080	22128810	NM_147076.1	Olfr619	NP_667287.1	ILMN_2714128	006220477	S	646	GTAGTACTTATTATTGTCTCATATGCTCGCATACTTTGTGCTGTGTACAG	7	+	110752815-110752864	7qE3	Mus musculus olfactory receptor 619 (Olfr619), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR31-5	MOR31-5
Mus musculus	RefSeq	ILMN_199003	ILMN_253121	TAAR2	NM_001007266.1	NM_001007266.1		209512	56605935	NM_001007266.1	Taar2	NP_001007267.1	ILMN_1249095	000520348	S	596	CCACCTTGTTTGTGGCAGGCTTTTTCACTCCTAGCTCGATGATGGTGGGG	10	+	23660965-23661014	10qA4	Mus musculus trace amine-associated receptor 2 (Taar2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm224; Gm225; Tarr2; Gpr58	Gm224; Gm225; Tarr2; Gpr58
Mus musculus	RefSeq	ILMN_253121	ILMN_253121	TAAR2	NM_001007266.1	NM_001007266.1		209512	56605935	NM_001007266.1	Taar2	NP_001007267.1	ILMN_2871830	005810326	S	363	CCTTTGCTCGGTGGCCGTCGATAGATTTTATGCCATCTGTCACCCTTTGC	10	+	23660732-23660781	10qA4	Mus musculus trace amine-associated receptor 2 (Taar2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm224; Gm225; Tarr2; Gpr58	Gm224; Gm225; Tarr2; Gpr58
Mus musculus	RefSeq	ILMN_216070	ILMN_241360	BDNF	NM_001048141.1	NM_001048141.1		12064	114326460	NM_001048141.1	Bdnf	NP_001041606.1	ILMN_2666980	004850187	S	94	CCTAGATCAAATGGAGCTTCTCGCTGAAGGCGTGCGAGTATTACCTCCGC	2	+	109532686-109532735	2qE3	Mus musculus brain derived neurotrophic factor (Bdnf), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IPI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IDA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IDA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_241360	ILMN_241360	BDNF	NM_001048141.1	NM_001048141.1		12064	114326460	NM_001048141.1	Bdnf	NP_001041606.1	ILMN_3105417	003060128	A	3675	CTTGCTGTGGTCTCTTGTTGGCAGAAATGTTTTATGCATGGCAGCAGGCC	2	+	109566874-109566923	2qE3	Mus musculus brain derived neurotrophic factor (Bdnf), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IPI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IDA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IDA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_215030	ILMN_215030	IQCA	scl0074918.2_57	NM_029122.1			29789236	NM_029122.1	Iqca		ILMN_2654736	003610598	S	1147	CAGGCTTGGCTGTTGTTCCTAATGCAGAATTGGGTAGGATGGCAACGGGG								Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185034	ILMN_245824	PCTK1	XM_979502.1	XM_979502.1		18555	94407103	XM_979502.1	Pctk1	XP_984596.1	ILMN_2423636	004210646	S	290	TAACCCCTCTCTAAATCCCCCTGGCGCCGTTCCAGGGCCAACGCCACATT				XqA1.3	PREDICTED: Mus musculus PCTAIRE-motif protein kinase 1, transcript variant 8 (Pctk1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212011	ILMN_212011	GAD1	NM_008077.4	NM_008077.4		14415	145301579	NM_008077.4	Gad1	NP_032103.2	ILMN_1234988	007550053	S	3078	CTCTGTGACTCGCTTAGCTGAAACCTAAGGCAATGTTTCTGAAGACCTCC				2qC2	Mus musculus glutamic acid decarboxylase 1 (Gad1), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2 [goid 4351] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	EP10; Gad-1; GAD67	EP10; Gad-1; GAD67
Mus musculus	RefSeq	ILMN_219848	ILMN_219848	CD34	NM_133654.1	NM_133654.1		12490	19526791	NM_133654.1	Cd34	NP_598415.1	ILMN_2714360	005420243	S	2222	CCTCTCCTGGGGTTAAGGGGAGAACAGGGGTCCTGATTTTAATGATGGCT	1	+	196781687-196781736	1qH6	Mus musculus CD34 antigen (Cd34), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU040960	AU040960
Mus musculus	MEEBO	ILMN_215192	ILMN_215192	4933417O13RIK	scl30456.3_411	NR_001461.1			32526885	NR_001461.1	4933417O13Rik		ILMN_2656568	005420403	S	18122	TGGCCCCACAGACAAGCTGCCATGTTACTACCCTGACTCTACTTCAGTGA										
Mus musculus	RefSeq	ILMN_213985	ILMN_213985	ST13	NM_133726.2	NM_133726.2		70356	118130905	NM_133726.2	St13	NP_598487.1	ILMN_1228919	006480450	S	1458	GTAAAAACTTAGGGGAGTCAATTCCTCCATTTTTCTTTACTAACTTGGGC	15	-	81195588-81195637	15qE1	Mus musculus suppression of tumorigenicity 13 (St13), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	HOP; SNC6; HSPABP; PRO0786; 3110002K08Rik; HIP; HSPABP1; 1110007I03Rik; p48; AW555194	HOP; SNC6; HSPABP; PRO0786; 3110002K08Rik; HIP; HSPABP1; 1110007I03Rik; p48; AW555194
Mus musculus	RefSeq	ILMN_188108	ILMN_260038	PPP2R3A	XM_001005535.1	XM_001005535.1		19054	94418989	XM_001005535.1	Ppp2r3a	XP_001005535.1	ILMN_2449855	003390750	S	96	GCGCATGCGTATCGTGACGTATGACAGCGAGTATGGCCTGGTGCCATCAG					PREDICTED: Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha (Ppp2r3a), mRNA.			Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200404	ILMN_200404	LOC381694	XM_355669.1	XM_355669.1			38081649	XM_355669.1	LOC381694		ILMN_2538639	005570082	S	1624	CCATTGCTATCATGGTACTTACCTTCTTGACCTTGCAGGGATACCCCGGG										
Mus musculus	RefSeq	ILMN_196656	ILMN_196656	BC051076	XM_144407.6	XM_144407.6		243090	94374889	XM_144407.6	BC051076	XP_144407.4	ILMN_2735486	004230048	S	3184	GTCCTAAAATTTTTTCTATATTCAGCTGCACAACCTAATAATTGCAAATA	5	+	88395193-88395242	5qE1	PREDICTED: Mus musculus cDNA sequence BC051076 (BC051076), mRNA.					
Mus musculus	RefSeq	ILMN_196656	ILMN_196656	BC051076	XM_144407.6	XM_144407.6		243090	94374889	XM_144407.6	BC051076	XP_144407.4	ILMN_1258765	000620601	S	1463	CCACACCTCCTGTCACCACTACAAACACCACCTCTGTGATTACTGGAGAC	5	+	88393472-88393521	5qE1	PREDICTED: Mus musculus cDNA sequence BC051076 (BC051076), mRNA.					
Mus musculus	RefSeq	ILMN_209010	ILMN_238665	APPL1	NM_145221.2	NM_145221.2		72993	50881952	NM_145221.2	Appl1	NP_660256.1	ILMN_1237942	002340717	S	2226	GTTGCTGCTTTTTGAGTTCTCATTTCCCTGGGATGTGGCACAGCGTATCC	14	-	27736859-27736908	14qA3	Mus musculus adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 (Appl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW209077; AI585782; DIP13; 7330406P05Rik; BB022931; C88264; 2900057D21Rik	AW209077; AI585782; DIP13; 7330406P05Rik; BB022931; C88264; 2900057D21Rik
Mus musculus	Riken	ILMN_206318	ILMN_206318	TIAF1	ri|D130026F03|PX00183A17|AK083855|2898					AK083855	Tiaf1		ILMN_1241159	004120674	S	2634	CGCTCAGAAATGAGTAGCAGGGGTGTCAGAAGTTCACGGTCATCCTTGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]			
Mus musculus	MEEBO	ILMN_195888	ILMN_195888	TRIOBP	scl0110253.14_323	NM_138579.2			34328343	NM_138579.2	Triobp		ILMN_2519676	006580241	S	2	CCAGCGCCACCCATGAAGACACTTCTCTTCTGTTCCGTGAGTCACCCTAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_208883	ILMN_208883	F730015K02RIK	scl0319526.3_201	NM_176935.2			31342417	NM_176935.2	F730015K02Rik		ILMN_2617149	003290228	S	2073	CAGGCTTTCAGGTTTTGTTACGGACGATGACTGCTTTTCCATCCCTCAAG										
Mus musculus	MEEBO	ILMN_208883	ILMN_208883	F730015K02RIK	scl0319526.3_201	NM_176935.2			31342417	NM_176935.2	F730015K02Rik		ILMN_1221420	006760681	S	204	CTGTCTCTTGAAGAGGAGCATAATGACAGTCTGAAATCCCAGCACTCAGG										
Mus musculus	Riken	ILMN_203620	ILMN_203620	A930034L24RIK	ri|A930034L24|PX00067O16|AK044704|3671					AK044704	A930034L24Rik		ILMN_1253080	006770180	S	3572	TGTGACAGCCCTGTGTCATTCATCTCCAAAGGCTTACGGCCCACAGGTCC										
Mus musculus	RefSeq	ILMN_240632	ILMN_240632	CRYGD	NM_007776.1	NM_007776.1		12967	6681038	NM_007776.1	Crygd	NP_031802.1	ILMN_2884655	004490647	S	382	TGTGCTAGAGGGCTGCTGGGTCCTCTACGACATGACCAACTACCGGGGAA	1	-	65108584-65108633	1qC2	Mus musculus crystallin, gamma D (Crygd), mRNA.		The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]	Cryg-1; DGcry-1; Lop12; Aey4	Cryg-1; DGcry-1; Lop12; Aey4
Mus musculus	RefSeq	ILMN_247021	ILMN_247021	AMIGO1	NM_001004293.1	NM_001004293.1		229715	51988878	NM_001004293.1	Amigo1	NP_001004293.1	ILMN_3135640	002370047	A	4782	GCCCCTGAAAGAGGCCAGGAAAGGGTAGACCTGTCTGAGGAGAACAAAGC	3	+	107994481-107994530	3qF2.3	Mus musculus adhesion molecule with Ig like domain 1 (Amigo1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISO]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence ISO]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence ISS]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence ISS]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence ISS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-89M15.6; ali2; A; Amigo; MGC25558	RP23-89M15.6; ali2; A; Amigo; MGC25558
Mus musculus	RefSeq	ILMN_223739	ILMN_223739	GRIK2	NM_010349.1	NM_010349.1		14806	6754073	NM_010349.1	Grik2	NP_034479.1	ILMN_1233956	007550601	S	2726	GGTTAGTGCCACCATACCATCCAGACACTGTTTAGTAAACTTTTGAAACT	10	-	48824808-48824823:48824824-48824857	10qB3	Mus musculus glutamate receptor, ionotropic, kainate 2 (beta 2) (Grik2), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]; A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex [goid 8328] [evidence IC ]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence TAS]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IGI]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity [goid 48172] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA];  [goid 15277] [evidence IGI];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA];  [goid 15277] [evidence IGI];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 15277] [evidence IMP]	Glur6; Glur-6; AW124492	Glur6; Glur-6; AW124492
Mus musculus	RefSeq	ILMN_199173	ILMN_319803	LOC666403	XR_034389.1	XR_034389.1		666403	149261694	XR_034389.1	LOC666403		ILMN_1214408	005870367	S	710	GACCCCCGACCTCTGGAAAGAGACTGTCTTCACAAATCAGGAATTCACTG	11	-	29501854-29501903	11qA3.3	PREDICTED: Mus musculus similar to ribosomal protein S2 (LOC666403), misc RNA.					
Mus musculus	RefSeq	ILMN_186414	ILMN_326412	4930430J20RIK	XM_001479733.1	XM_001479733.1		78109	149252758	XM_001479733.1	4930430J20Rik	XP_001479783.1	ILMN_2435354	004860192	S	319	TTCCTCCTCAGGCGATGGAGGTATGGTGCTGACTGGTCCTTCAGCAGCTC				4qC7	PREDICTED: Mus musculus RIKEN cDNA 4930430J20 gene (4930430J20Rik), mRNA.					
Mus musculus	Riken	ILMN_202866	ILMN_202866	4631405J19RIK	ri|4631405J19|PX00011N21|AK028444|2910					AK028444	4631405J19Rik		ILMN_1224749	002690112	S	2643	CCTGCGGCTCCCACTAGAACAAGGACAGCAGAGGAGACTGAAGGAGAGGA										
Mus musculus	MEEBO	ILMN_194153	ILMN_194153	PREB	scl26745.6_280				7710083	NM_016703	Preb		ILMN_2683620	003360731	S	1796	GTTAGGGTAGGAAGAGGCACAAAGAGGACCCCGGTAGCGGTGATCTGTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]		
Mus musculus	MEEBO	ILMN_194153	ILMN_194153	PREB	scl26745.6_280				7710083	NM_016703	Preb		ILMN_2503893	001030452	S	7	GCATGAAGTAAATGAGCTGGCCTAGCCTCACAGACCTAAGGACACTGGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]		
Mus musculus	RefSeq	ILMN_228617	ILMN_228617	D830030K20RIK	NM_177135.2	NM_177135.2		320333	50233920	NM_177135.2	D830030K20Rik	NP_796109.1	ILMN_3049465	001580386	I	861	GCGGTGAGAAGGGGGCTCTACCACAGTGGGCTTTTTCCTGAGTCCAAACC	14	-	3427741-3427790	14qA1	Mus musculus RIKEN cDNA D830030K20 gene (D830030K20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_228617	ILMN_228617	D830030K20RIK	NM_177135.2	NM_177135.2		320333	50233920	NM_177135.2	D830030K20Rik	NP_796109.1	ILMN_3125369	004040615	A	452	GAACGCAATTGTCTCATGGGGAAGAAAAGAGGTTCTGTGAGGAGGCCAGC	14	-	3434317-3434366	14qA1	Mus musculus RIKEN cDNA D830030K20 gene (D830030K20Rik), mRNA.					
Mus musculus	MEEBO	ILMN_184142	ILMN_184142	9330159N05RIK	scl0319240.2_329						9330159N05Rik		ILMN_2416209	000380576	S	3	CCAGGGGGCCACGAACAGGAGAATTGTGAATGGAAACCATCTTGAGTTAA										
Mus musculus	RefSeq	ILMN_201559	ILMN_201559	PLEKHK1	NM_133244.2	NM_133244.2			24638449	NM_133244.2	Plekhk1		ILMN_1233726	004290739	S	967	CCACCCCAGAAAATGTTTCCCCTCCGCTTCCTGGAATTGGCATCTAAGGG										
Mus musculus	RefSeq	ILMN_213864	ILMN_213864	TKTL1	NM_031379.2	NM_031379.2		83553	125347420	NM_031379.2	Tktl1	NP_113556.2	ILMN_1240934	004180427	S	1271	CCCAATTGTGTTGTTTTCTATCCAAGTGATGCCGTCTCCACAGAACATGC	X	+	71439135-71439184	XqA7.3	Mus musculus transketolase-like 1 (Tktl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC132800; C79967	MGC132800; C79967
Mus musculus	RefSeq	ILMN_213864	ILMN_213864	TKTL1	NM_031379.2	NM_031379.2		83553	125347420	NM_031379.2	Tktl1	NP_113556.2	ILMN_1249204	002810482	S	2212	GACCCCCGAGATACATAGTGCTGTTCAACTTGAGTTACCATGTACACTGC	X	+	71444756-71444805	XqA7.3	Mus musculus transketolase-like 1 (Tktl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC132800; C79967	MGC132800; C79967
Mus musculus	Riken	ILMN_203768	ILMN_203768	RPGR	ri|A230052I03|PX00128D01|AK038652|2675					AK038652	Rpgr		ILMN_1248760	005420717	S	2328	AGCAAACACATCTCCTTTGTGCTGAGAACTTGCTCTTGGAGTCCTGAGCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_189409	ILMN_189409	D430044G18RIK	scl51879.12_56				27369897	NM_172628	D430044G18Rik		ILMN_2461003	005340356	S	6	GGATGCAGGCATCAGACAATAGTTAATTACATGGTGAACTCTCGTTCTCT										
Mus musculus	RefSeq	ILMN_220113	ILMN_220113	OLFR644	NM_147121.1	NM_147121.1		259125	22128754	NM_147121.1	Olfr644	NP_667332.1	ILMN_2717767	001400731	S	791	CTCGCTATGGGAGGCATGCCCCTCACTATGTACACACACTCTTGTCACTC	7	-	111216703-111216752	7qE3	Mus musculus olfactory receptor 644 (Olfr644), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR13-1	MOR13-1
Mus musculus	MEEBO	ILMN_189760	ILMN_189760	AOF1	scl44814.23_93				26986558	NM_172262	Aof1		ILMN_2464129	004640594	S	10	CACTGTGTCAACCTCCTTTCCAGTCCTTTAAGCTTCTTGGTCATAAGCAT							The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	Riken	ILMN_204775	ILMN_204775	GPR106, LGR8, GPCR	ri|C130013I10|PX00167M12|AK047861|2838					AK047861	GPR106, LGR8, GPCR		ILMN_1232852	002760242	S	2506	GGATGTGGCTGGCTTTTATAGCTAAGGCGCGAGACTCTGATTAAGGTGCG										
Mus musculus	RefSeq	ILMN_256976	ILMN_256976	DCUN1D2	NM_001042649.1	NM_001042649.1		102323	111162654	NM_001042649.1	Dcun1d2	NP_001036114.1	ILMN_3109076	004490341	A	2593	GGAAAGGAGCAGTGATATGATTGAGCAGGTGAAGGCATGTGCTGCCCAGC	8	-	13256271-13256320	8qA1.1	Mus musculus DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae) (Dcun1d2), transcript variant 3, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		mFLJ10704; AW495713	mFLJ10704; AW495713
Mus musculus	RefSeq	ILMN_192061	ILMN_256976	DCUN1D2	NM_001042649.1	NM_001042649.1		102323	111162654	NM_001042649.1	Dcun1d2	NP_001036114.1	ILMN_2484618	000240463	S	862	CCAAGGGATACTTGGAACCTTCTCCTAGATTTTGGAAACATGATTGCAGA	8	-	13258972-13259021	8qA1.1	Mus musculus DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae) (Dcun1d2), transcript variant 3, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		mFLJ10704; AW495713	mFLJ10704; AW495713
Mus musculus	MEEBO	ILMN_212885	ILMN_212885	POSTN	scl0001963.1_13	NM_015784.1			7657428	NM_015784.1	Postn		ILMN_2766028	002710424	S	3114	AGTGAGTTTAGACTTTGGAATAGGACTTCATACCTTTTTTTATTGTTAAC						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211447	ILMN_234318	1810012P15RIK	NM_001076681.1	NM_001076681.1		66274	116008180	NM_001076681.1	1810012P15Rik	NP_001070149.1	ILMN_1229428	000110376	S	215	CCGAGAGAATCCAGCAGATTATTAAAAGAGCCATTGAAGATGCCGACTGG	11	+	78651623-78651672	11qB5	Mus musculus RIKEN cDNA 1810012P15 gene (1810012P15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219750	ILMN_219750	DNAJC3	NM_008929.2	NM_008929.2		100037258	31542562	NM_008929.2	Dnajc3	NP_032955.2	ILMN_2775386	003890209	S	3294	TCAGTTCAAGCCAGTGTGAAACATTGAATGAAAAATAAAAGAACATTTTT	14	+	119379083-119379121	14qE4	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 3 (Dnajc3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence ISS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence ISS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	MGC6474; mp58; AU067833; Dnajc3b; Prkri; p58; p58IPK; Dnajc3; AA408985	MGC6474; mp58; AU067833; Dnajc3b; Prkri; p58; p58IPK; Dnajc3; AA408985
Mus musculus	RefSeq	ILMN_219750	ILMN_219750	DNAJC3	NM_008929.2	NM_008929.2		100037258	31542562	NM_008929.2	Dnajc3	NP_032955.2	ILMN_2870549	004610095	S	3233	GTTTGAGCCAGCTTGGTTTACATAGTGAGTTCCGTGCCAGGGCCTCCACC	14	+	119379022-119379071	14qE4	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 3 (Dnajc3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence ISS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence ISS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	MGC6474; mp58; AU067833; Dnajc3b; Prkri; p58; p58IPK; Dnajc3; AA408985	MGC6474; mp58; AU067833; Dnajc3b; Prkri; p58; p58IPK; Dnajc3; AA408985
Mus musculus	RefSeq	ILMN_210037	ILMN_318412	LOC100048726	XM_001481049.1	XM_001481049.1		100048726	149249763	XM_001481049.1	LOC100048726	XP_001481099.1	ILMN_2650299	004850170	S	2556	TTCCTCCACATGAAATTATATGTCATAAGTGTCCTGCTAATTGTAGATGT					PREDICTED: Mus musculus similar to SEC23B (LOC100048726), mRNA.					
Mus musculus	RefSeq	ILMN_210037	ILMN_318412	LOC100048726	XM_001481049.1	XM_001481049.1		100048726	149249763	XM_001481049.1	LOC100048726	XP_001481099.1	ILMN_1245383	006660152	S	1975	CTCCTGGACAGCAGTAGCATTCTAGCTGACAGAATTCTGCTGATGGATAC					PREDICTED: Mus musculus similar to SEC23B (LOC100048726), mRNA.					
Mus musculus	RefSeq	ILMN_209945	ILMN_209945	2510006D16RIK	NM_029748.2	NM_029748.2		76799	141802797	NM_029748.2	2510006D16Rik	NP_084024.1	ILMN_1249344	004670092	S	512	GGCCTCTCTCATCTCTCAGATCATGTCTATCTCAGGGGCCACAATAAGAA	4	+	129284143-129284192	4qD2.2	Mus musculus RIKEN cDNA 2510006D16 gene (2510006D16Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1500002D11Rik; 4933407D05Rik	1500002D11Rik; 4933407D05Rik
Mus musculus	RefSeq	ILMN_221958	ILMN_221958	SIX2	NM_011380.1	NM_011380.1		20472	33859627	NM_011380.1	Six2	NP_035510.1	ILMN_2742627	000650280	S	1374	CTTTTGAGATCCTTTGGAGGCCAGAGACCGAGTCTTGAACTAGGCAAGGG	17	-	86084285-86084334	17qE4	Mus musculus sine oculis-related homeobox 2 homolog (Drosophila) (Six2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209371	ILMN_209371	SLC44A4	NM_023557.2	NM_023557.2		70129	31980643	NM_023557.2	Slc44a4	NP_076046.1	ILMN_2970023	005080424	S	2110	GGCACCTACAGGGGGAAAGACCAGGAAGAAGTGAGAGACTCATCGTGACC	17	+	35060406-35060455	17qB1	Mus musculus solute carrier family 44, member 4 (Slc44a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2210409B01Rik; NG22	2210409B01Rik; NG22
Mus musculus	MEEBO	ILMN_221712	ILMN_221712	RBM16	scl0319995.1_17	NM_177053.1			46849807	NM_177053.1	Rbm16		ILMN_2739373	003840195	S	1445	TGTTTATATCGTTTATAGACTGAGCTATGGATTTGTGTGATTAACTGTTA										
Mus musculus	MEEBO	ILMN_190769	ILMN_190769	WRB	scl48836.8_442	NM_207301.1			46409249	NM_207301.1	Wrb		ILMN_2473122	004280041	S	15	CAGTGAGCCATAGTCTGCAATGGCGCTTTTTGCCCACATCGTTTAGGTAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_217548	ILMN_229036	CLDND1	NM_171826.2	NM_171826.2		224250	133892263	NM_171826.2	Cldnd1	NP_741968.1	ILMN_2684563	006380164	S	1630	TTGTTCTAGCTGAGTACTATATGGGAGGTCCTACCAATATCGACCCCCCA	16	+	58733981-58734030	16qC1.2	Mus musculus claudin domain containing 1 (Cldnd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW489850; AA407103; 1110019C08Rik; AI849195	AW489850; AA407103; 1110019C08Rik; AI849195
Mus musculus	RefSeq	ILMN_215957	ILMN_215957	ARHGEF7	NM_017402.3	NM_017402.3		54126	118130789	NM_017402.3	Arhgef7	NP_059098.2	ILMN_1213960	006280739	S	2099	AAAAAATTATAGTCGAAGAAACCAAGAGCAATGGGCAGACAGTGATAGAG	8	+	11831538-11831587	8qA1.1	Mus musculus Rho guanine nucleotide exchange factor (GEF7) (Arhgef7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pak3bp; betaPix-b; PIX; mKIAA0142; Cool; betaPix-c; p85SPR; p85Cool1	Pak3bp; betaPix-b; PIX; mKIAA0142; Cool; betaPix-c; p85SPR; p85Cool1
Mus musculus	RefSeq	ILMN_218012	ILMN_218012	TMEM198	NM_177056.3	NM_177056.3		319998	142386564	NM_177056.3	Tmem198	NP_796030.1	ILMN_3162551	000380593	I	1950	GTGAGCCCCACTGGGAAGTGCTCAGGGTTGTGTGTTGCCCATACATGTGT	1	+	75481774-75481823	1qC4	Mus musculus transmembrane protein 198 (Tmem198), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211013	ILMN_211013	SERPINA3B	NM_173024.3	NM_173024.3		271047	146198593	NM_173024.3	Serpina3b	NP_766612.1	ILMN_2611591	004180026	S	1942	CTACTCAGGGCAGAGTAGTACCTTTTCTCTCAGTTCCCAGATGACCAGCC				12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 3B (Serpina3b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A030003A19Rik; 6A1	A030003A19Rik; 6A1
Mus musculus	MEEBO	ILMN_219797	ILMN_219797	0610007P08RIK	scl0076251.1_236				51767744	XM_484269	0610007P08Rik		ILMN_1224596	005420050	S	3044	GTGGCAGAGGGAATGGACCAGTTCCAAATCTCTTGTGTCTCGAGAACATG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217634	ILMN_217634	4732474O15RIK	XM_138397.6	XM_138397.6		238455	94393363	XM_138397.6	4732474O15Rik	XP_138397.5	ILMN_2685733	004210162	S	3616	GTGGACAGACACCTCAGGGTTGAAGGGAATAGAGGGACAGGGGTAAGACA	12	+	120705205-120705254	12qF2	PREDICTED: Mus musculus RIKEN cDNA 4732474O15 gene (4732474O15Rik), mRNA.					
Mus musculus	MEEBO	ILMN_219712	ILMN_219712	D730018G16	scl21810.6.1_233	NM_183223.1			34147307	NM_183223.1	D730018G16		ILMN_1232557	000780167	S	1473	ACCAATAAGTTTTACATTATCTAATCCCTCTAAAAATTCCCCTAATTCCC										
Mus musculus	RefSeq	ILMN_210510	ILMN_224350	TMTC3	NM_001033332.2	NM_001033332.2		237500	142348813	NM_001033332.2	Tmtc3	NP_001028504.1	ILMN_2733216	000620114	S	605	CCCAATCCATACCGAGGCAGTCACAGGTGTTGTAGGAAGAGCGGAACTCT	10	-	99937077-99937108:99939191-99939208	10qD1	Mus musculus transmembrane and tetratricopeptide repeat containing 3 (Tmtc3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	B130008E12Rik; 9130014E20Rik	B130008E12Rik; 9130014E20Rik
Mus musculus	Riken	ILMN_205616	ILMN_205616	D030070I18RIK	ri|D030070I18|PX00182O07|AK051096|1764					AK051096	D030070I18Rik		ILMN_1237639	006330400	S	1699	AACTGCTCTGGGCTTGACCGTGGGGGGAGCTGCACAACCGAATGCACTTA										
Mus musculus	RefSeq	ILMN_191950	ILMN_237488	ZFP746	XM_904306.3	XM_904306.3		69228	149255126	XM_904306.3	Zfp746	XP_909399.3	ILMN_1216098	003290521	S	3719	GCTGTCCCCACCACACATAGCCATTCCCATTTTGTTAAAGCAGCCACTGG	6	-	48012615-48012664	6qB2.3	PREDICTED: Mus musculus zinc finger protein 746 (Zfp746), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200726	ILMN_237488	ZFP746	XM_904306.3	XM_904306.3		69228	149255126	XM_904306.3	Zfp746	XP_909399.3	ILMN_2539783	007330064	S	3294	CCACCTCACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAG	6	-	48013040-48013089	6qB2.3	PREDICTED: Mus musculus zinc finger protein 746 (Zfp746), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224593	ILMN_224593	RIMS1	NM_053270.1	NM_053270.1		116837	57528311	NM_053270.1	Rims1	NP_444500.1	ILMN_3058780	004730546	I	2737	AGGAGGCGACCTGCTAGCCCCAGGATTCAAATCCAGCATGCGTCTCCGGA				1qA5	Mus musculus regulating synaptic membrane exocytosis 1 (Rims1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RIM1a; KIAA0340; Serg1; Rim; RIM1alpha; mKIAA0340; C030033M19Rik; Rab3ip1; RIM1	RIM1a; KIAA0340; Serg1; Rim; RIM1alpha; mKIAA0340; C030033M19Rik; Rab3ip1; RIM1
Mus musculus	RefSeq	ILMN_213326	ILMN_213326	RASSF10	NM_175279.3	NM_175279.3		78748	125988386	NM_175279.3	Rassf10	NP_780488.2	ILMN_2636005	005090703	S	3370	TCGCTATTGGAACGTCCCCTTTTCACAGACTGTCCCCACTCTGATGCCAC	7	+	120100845-120100894	7qF1	Mus musculus Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 (Rassf10), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]			
Mus musculus	RefSeq	ILMN_193643	ILMN_193643	USP28	NM_175482.3	NM_175482.3		235323	46852150	NM_175482.3	Usp28	NP_780691.2	ILMN_2828768	006110717	S	3702	TCTTGCCTGGCTCTTGCCAGTGATGAAAAGAGGTGCTGGTGAGCCCTTCC	9	+	48850104-48850153	9qA5.3	Mus musculus ubiquitin specific peptidase 28 (Usp28), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	AU022237; 9830148O20Rik; mKIAA1515	AU022237; 9830148O20Rik; mKIAA1515
Mus musculus	RefSeq	ILMN_212715	ILMN_212715	CCL5	NM_013653.2	NM_013653.2		20304	141803000	NM_013653.2	Ccl5	NP_038681.1	ILMN_1231814	001690768	S	293	CAACTATTTGGAGATGAGCTAGGATAGAGGGTTTCTTGATTCTGACCCTG	11	-	83339448-83339478:83339479-83339497	11qC	Mus musculus chemokine (C-C motif) ligand 5 (Ccl5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus [goid 34612] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	TCP228; SISd; Scya5; RANTES; MuRantes	TCP228; SISd; Scya5; RANTES; MuRantes
Mus musculus	RefSeq	ILMN_216121	ILMN_230100	PRR16	NM_001081224.2	NM_001081224.2		71373	148540090	NM_001081224.2	Prr16	NP_001074693.1	ILMN_2667589	001510528	S	1495	AATTTGAAACATATGTTCAACTATATGTATAATAAAATATTTTGAGCTTT				18qD1	Mus musculus proline rich 16 (Prr16), mRNA.				AI607429; 5430406M13Rik	AI607429; 5430406M13Rik
Mus musculus	RefSeq	ILMN_213804	ILMN_213804	PAFAH1B3	NM_008776.1	NM_008776.1		18476	6679200	NM_008776.1	Pafah1b3	NP_032802.1	ILMN_2640971	006330630	S	703	TATGATTACCTACACCTGAGCCGCCTGGGGTACACACCTGTCTGCCGGGC	7	-	26080185-26080234	7qA3	Mus musculus platelet-activating factor acetylhydrolase, isoform 1b, alpha1 subunit (Pafah1b3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]	mus[g]; Pafahg	mus[g]; Pafahg
Mus musculus	RefSeq	ILMN_215890	ILMN_257886	2310007H09RIK	NM_029609.1	NM_029609.1		76429	70778743	NM_029609.1	2310007H09Rik	NP_083885.1	ILMN_1230604	006380703	S	704	ATGACATCGTGGGTGACGTTGGCGGTGCCCAGCAGTGTGGAATGAGAGCT	7	+	139841957-139842006	7qF3	Mus musculus RIKEN cDNA 2310007H09 gene (2310007H09Rik), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209947	ILMN_257886	2310007H09RIK	NM_029609.1	NM_029609.1		76429	70778743	NM_029609.1	2310007H09Rik	NP_083885.1	ILMN_2600720	007200398	S	836	CGGAGGCTGTGGATCTGCTGCTGAAGTACACGGACAAGTGACCAGCCTTC	7	+	139897331-139897371:139897372-139897380	7qF3	Mus musculus RIKEN cDNA 2310007H09 gene (2310007H09Rik), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]		
Mus musculus	RefSeq	ILMN_231065	ILMN_231065	NDUFB6	NM_001033305.1	NM_001033305.1		230075	84781778	NM_001033305.1	Ndufb6	NP_001028477.1	ILMN_2914507	006480747	S	165	GCGATTCTGGGATAACTTTTTGCGGGACGGGGCCGTGTGGAAGAACATGG	4	-	40466413-40466416:40467829-40467874	4qA5	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6 (Ndufb6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		Gm137	Gm137
Mus musculus	MEEBO	ILMN_193010	ILMN_193010	IGKV12-98_AJ235949_IG_KAPPA_VARIABLE_12-98_12	IGKV12-98_AJ235949_Ig_kappa_variable_12-98_12						IGKV12-98_AJ235949_Ig_kappa_variable_12-98_12		ILMN_1235639	006370687	S	2	CTCAGCTCCTGGGATTACTGCTGCTCTGGTTTGCAGGTGGTAAATGTGAC										
Mus musculus	RefSeq	ILMN_184447	ILMN_239150	ROCK1	NM_009071.2	NM_009071.2		19877	134948665	NM_009071.2	Rock1	NP_033097.1	ILMN_2742675	005420070	S	4432	CCCACCATCTGGCTTTGTCCGTGCCTCTCCTCGAACGCTGTCAACAAGAT	18	-	10067523-10067572	18qA1	Mus musculus Rho-associated coiled-coil containing protein kinase 1 (Rock1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; The assembly of a bleb, a cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32060] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Rock-I; 1110055K06Rik	Rock-I; 1110055K06Rik
Mus musculus	RefSeq	ILMN_213577	ILMN_213577	PES1	NM_022889.3	NM_022889.3		64934	118130386	NM_022889.3	Pes1	NP_075027.1	ILMN_2638558	005690156	S	2787	GCTCACACTTCCACATTGTATGTACAAAAGTGTATATGGCTCGCATTTCC	11	+	3879883-3879932	11qA1	Mus musculus pescadillo homolog 1, containing BRCT domain (zebrafish) (Pes1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly the nucleolus [goid 7000] [evidence IMP]; Progression through metaphase, the stage of mitosis at which chromosomes are firmly attached to the mitotic spindle at its equator but have not yet segregated to opposite poles [goid 89] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212927	ILMN_212927	CFI	NM_007686.2	NM_007686.2		12630	110347405	NM_007686.2	Cfi	NP_031712.2	ILMN_2631704	004200195	S	1787	GCCCGAGTTCCCAGGTGTTTACACCAGAGTGGCCAATTATTTTGATTGGA	3	+	129577960-129578009	3qG3	Mus musculus complement component factor i (Cfi), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209824	ILMN_237004	ESF1	NM_001081090.1	NM_001081090.1		66580	124487343	NM_001081090.1	Esf1	NP_001074559.1	ILMN_1242492	006900678	S	3135	AGTACAGTTATTCAAGCTTCCTAAGATGCTATTTACAATCTATGTAAAAT	2	-	139945824-139945873	2qF3	Mus musculus ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) (Esf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		C79684; AW545818; ABTAP; RP23-324H1.4; 2610101J03Rik	C79684; AW545818; ABTAP; RP23-324H1.4; 2610101J03Rik
Mus musculus	MEEBO	ILMN_216009	ILMN_216009	4933421B21RIK	scl23234.8.1_12	XM_130851.2			28490537	XM_130851.2	4933421B21Rik		ILMN_2717270	005670681	S	643	GGCCTATCTGGAATATTCTCAATCTAAGACCCAGCCTGTCGACCCGAAAC										
Mus musculus	RefSeq	ILMN_228302	ILMN_228302	NOSTRIN	NM_181547.2	NM_181547.2		329416	40556611	NM_181547.2	Nostrin	NP_853525.2	ILMN_2821676	001580296	S	1427	GGAGACATCGTGACCGTCCATGAGAAGAAAGAAGAAGGATGGTGGTTCGG	2	+	69023605-69023605:69027054-69027102	2qC2	Mus musculus nitric oxide synthase trafficker (Nostrin), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	mDaIP2; Daip2	mDaIP2; Daip2
Mus musculus	RefSeq	ILMN_212385	ILMN_212385	CCKAR	NM_009827.1	NM_009827.1		12425	6753305	NM_009827.1	Cckar	NP_033957.1	ILMN_2625830	007210546	S	3138	CAAATGGATATTGGAACTCAACAAGTGTTATCATTCTTCCATAAAAGTTG	5	-	54089863-54089912	5qC1	Mus musculus cholecystokinin A receptor (Cckar), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with cholecystokinin, a 33-amino acid peptide secreted by the upper intestinal mucosa and also found in the central nervous system, to initiate a change in cell activity [goid 4951] [evidence IEA]	AW106902	AW106902
Mus musculus	RefSeq	ILMN_227026	ILMN_227026	SERPINA3H	NM_001034870.2	NM_001034870.2		546546	124517725	NM_001034870.2	Serpina3h	NP_001030042.2	ILMN_2889832	001450491	S	1888	AAGCAGCTCCCCCTAGCACTCCTACTCAGAACAGAGAAGTAGCCTAACCC	12	+	105492461-105492510	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 3H (Serpina3h), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6C28; spi2	6C28; spi2
Mus musculus	RefSeq	ILMN_214085	ILMN_214085	AASS	NM_013930.3	NM_013930.3		30956	83779005	NM_013930.3	Aass	NP_038958.2	ILMN_2657685	001170544	S	800	GCCCAGGAAGTCTTTAATGAGCTACCTTGTGAGTATGTGGAGCCCCACGA	6	-	23063701-23063750	6qA3.1	Mus musculus aminoadipate-semialdehyde synthase (Aass), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 6-(L-1,3-dicarboxypropyl)-L-lysine + NAD+ + H2O = L-glutamate + 2-aminoadipate 6-semialdehyde + NADH + H+ [goid 47131] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: N6-(L-1,3-dicarboxypropyl)-L-lysine + NADP+ + H2O = L-lysine + 2-oxoglutarate + NADPH + H+ [goid 47130] [evidence IEA]	Lorsdh; SDH; LKR; LOR; LOR/SDH; LKR/SDH	Lorsdh; SDH; LKR; LOR; LOR/SDH; LKR/SDH
Mus musculus	RefSeq	ILMN_214085	ILMN_214085	AASS	NM_013930.3	NM_013930.3		30956	83779005	NM_013930.3	Aass	NP_038958.2	ILMN_2644092	006590575	S	3135	TATTGTGCTTCCTTTTCCCCGAGAACATATTATCAGCAAGTGCAGTTGTA	6	-	23022677-23022726	6qA3.1	Mus musculus aminoadipate-semialdehyde synthase (Aass), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 6-(L-1,3-dicarboxypropyl)-L-lysine + NAD+ + H2O = L-glutamate + 2-aminoadipate 6-semialdehyde + NADH + H+ [goid 47131] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: N6-(L-1,3-dicarboxypropyl)-L-lysine + NADP+ + H2O = L-lysine + 2-oxoglutarate + NADPH + H+ [goid 47130] [evidence IEA]	Lorsdh; SDH; LKR; LOR; LOR/SDH; LKR/SDH	Lorsdh; SDH; LKR; LOR; LOR/SDH; LKR/SDH
Mus musculus	RefSeq	ILMN_214085	ILMN_214085	AASS	NM_013930.3	NM_013930.3		30956	83779005	NM_013930.3	Aass	NP_038958.2	ILMN_2718132	003420138	S	731	GGTTTAATGCCAAAGTCAATAGGACCCTTAACGTTTGTCTTCACAGGGAC	6	-	23064856-23064905	6qA3.1	Mus musculus aminoadipate-semialdehyde synthase (Aass), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 6-(L-1,3-dicarboxypropyl)-L-lysine + NAD+ + H2O = L-glutamate + 2-aminoadipate 6-semialdehyde + NADH + H+ [goid 47131] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: N6-(L-1,3-dicarboxypropyl)-L-lysine + NADP+ + H2O = L-lysine + 2-oxoglutarate + NADPH + H+ [goid 47130] [evidence IEA]	Lorsdh; SDH; LKR; LOR; LOR/SDH; LKR/SDH	Lorsdh; SDH; LKR; LOR; LOR/SDH; LKR/SDH
Mus musculus	RefSeq	ILMN_222512	ILMN_222512	OLFR522	NM_146952.1	NM_146952.1		258954	22129012	NM_146952.1	Olfr522	NP_667163.1	ILMN_2750658	004180468	S	876	CCTGCGCAACCGTGACATCAGAGAGGCATTTACCAAGTTCCTGCAGCCCC	7	-	147347922-147347971	7qF4	Mus musculus olfactory receptor 522 (Olfr522), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR103-5	MOR103-5
Mus musculus	MEEBO	ILMN_184796	ILMN_184796	SCL0003131.1_3	scl0003131.1_3	AK034046.1			26329640	AK034046.1	scl0003131.1_3		ILMN_2421641	006520270	S	3	GTCAGTCGAGTCTGGTGAACATCTGTCGGCCAAGCTAACCATGATGCCAT										
Mus musculus	MEEBO	ILMN_188112	ILMN_188112	HNRPA2B1	scl30051.1.1_179				7949052	NM_016806	Hnrpa2b1		ILMN_1238842	006040725	S	1546	CATAACGTTTTTCCTTCCCAATTTTAAGTGCGTGTGTAGAGTTAAGAAGC										
Mus musculus	RefSeq	ILMN_221123	ILMN_221123	RCHY1	NM_026557.2	NM_026557.2		68098	40254496	NM_026557.2	Rchy1	NP_080833.1	ILMN_2948987	000520446	S	1654	TTGGTTCTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGACCTGGAGC	5	-	93024367-93024416	5qE2	Mus musculus ring finger and CHY zinc finger domain containing 1 (Rchy1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARNIP; PRO1996; CHIMP; AU042618; Zfp363; Pirh2; mARNIP; 6720407C15Rik	ARNIP; PRO1996; CHIMP; AU042618; Zfp363; Pirh2; mARNIP; 6720407C15Rik
Mus musculus	RefSeq	ILMN_185830	ILMN_185830	UBA1	NM_009457.3	NM_009457.3		22201	141803326	NM_009457.3	Uba1	NP_033483.1	ILMN_2430374	006250022	S	3072	TGCTGTCCCAGGGCGTGTCCATGCTCTATTCTTTCTTCATGCCAGCTGCT	X	+	20259260-20259309	XqA1.3	Mus musculus ubiquitin-like modifier activating enzyme 1 (Uba1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	A1S9; AA989744; Ube-1; Sbx	A1S9; AA989744; Ube-1; Sbx
Mus musculus	RefSeq	ILMN_185830	ILMN_185830	UBA1	NM_009457.3	NM_009457.3		22201	141803326	NM_009457.3	Uba1	NP_033483.1	ILMN_2443831	004260747	S	35	TTTGCTCTTCCGTTGCCCTGTGGCTTCGGCTTGTCTCCAGAAGGAAGGCG	X	+	20235581-20235630	XqA1.3	Mus musculus ubiquitin-like modifier activating enzyme 1 (Uba1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	A1S9; AA989744; Ube-1; Sbx	A1S9; AA989744; Ube-1; Sbx
Mus musculus	RefSeq	ILMN_218836	ILMN_218836	D11WSU47E	NM_177777.4	NM_177777.4		276852	142370490	NM_177777.4	D11Wsu47e	NP_808445.2	ILMN_1230030	001660477	S	2124	GCCGAGAGCAGAAGAAACACTTTACATTTGTACCAGGTCGCGAAGGGTGC	11	+	113555887-113555936	11qE2	Mus musculus DNA segment, Chr 11, Wayne State University 47, expressed (D11Wsu47e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC30773; MGC57008	MGC30773; MGC57008
Mus musculus	RefSeq	ILMN_218836	ILMN_218836	D11WSU47E	NM_177777.4	NM_177777.4		276852	142370490	NM_177777.4	D11Wsu47e	NP_808445.2	ILMN_2700833	002690670	S	1869	TTCGGCTGATAGCAGGAGTCTGGAACCCCTGACGCTTACAACTTCCAGCC	11	+	113553062-113553111	11qE2	Mus musculus DNA segment, Chr 11, Wayne State University 47, expressed (D11Wsu47e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC30773; MGC57008	MGC30773; MGC57008
Mus musculus	RefSeq	ILMN_239612	ILMN_239612	PARP14	NM_001039530.1	NM_001039530.1		547253	87299606	NM_001039530.1	Parp14	NP_001034619.1	ILMN_2825803	002970521	S	7116	GCCTTGAGACCTTGGCTGCTGTGTCTAAGTGGACTGGCAGAGACTGTGGC	16	-	35752828-35752877	16qB3	Mus musculus poly (ADP-ribose) polymerase family, member 14 (Parp14), mRNA. XM_901644 XM_916789 XM_924484 XM_924488	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BC021340; KIAA1268; 1600029O10Rik; MGC29390; mKIAA1268; CoaSt6	BC021340; KIAA1268; 1600029O10Rik; MGC29390; mKIAA1268; CoaSt6
Mus musculus	RefSeq	ILMN_237301	ILMN_237301	BC051142	NM_001001177.1	NM_001001177.1		407788	47564077	NM_001001177.1	BC051142	NP_001001177.1	ILMN_2936419	006420593	S	1500	CGCTCCACAGACCGGAGAGGCTCCTTTCGAAAGTAAACCACCCGAAGAAC	17	+	34581029-34581029:34582432-34582443:34582458-34582469:34582964-34582978:34582990-34582999	17qB1	Mus musculus cDNA sequence BC051142 (BC051142), mRNA.					
Mus musculus	RefSeq	ILMN_213273	ILMN_213273	LMLN	NM_172823.2	NM_172823.2		239833	142362513	NM_172823.2	Lmln	NP_766411.1	ILMN_1224266	005960368	S	3792	CCTGCATGCAGTATAAGTTAGAGGTATTCATCACTGTGCAAAGCTGAGGC	16	+	33125426-33125475	16qB3	Mus musculus leishmanolysin-like (metallopeptidase M8 family) (Lmln), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	5330415H22Rik	5330415H22Rik
Mus musculus	RefSeq	ILMN_210229	ILMN_210229	CAR2	NM_009801.3	NM_009801.3		12349	31981656	NM_009801.3	Car2	NP_033931.3	ILMN_2603504	000830113	S	1220	TCATAGTTTTGTGATTATAAATGAGATGAATGTTCACCCTTCCAAGATCT	3	+	14900499-14900548	3qA1	Mus musculus carbonic anhydrase 2 (Car2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of carbon dioxide (CO2) into, out of, within or between cells [goid 15670] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; The regulated release of a substance by a cell, a group of cells, or a tissue [goid 46903] [evidence IMP]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	Lvtw-5; CAII; AI131712; Car-2; Ltw-5	Lvtw-5; CAII; AI131712; Car-2; Ltw-5
Mus musculus	RefSeq	ILMN_210229	ILMN_210229	CAR2	NM_009801.3	NM_009801.3		12349	31981656	NM_009801.3	Car2	NP_033931.3	ILMN_2606746	005290711	S	275	CCCCTCAGTGACTCCTACAGATTGATCCAGTTTCACTTTCACTGGGGCTC	3	+	14895036-14895085	3qA1	Mus musculus carbonic anhydrase 2 (Car2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of carbon dioxide (CO2) into, out of, within or between cells [goid 15670] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; The regulated release of a substance by a cell, a group of cells, or a tissue [goid 46903] [evidence IMP]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	Lvtw-5; CAII; AI131712; Car-2; Ltw-5	Lvtw-5; CAII; AI131712; Car-2; Ltw-5
Mus musculus	MEEBO	ILMN_209133	ILMN_209133	GNA11	scl0003816.1_114	NM_010301.1			6754003	NM_010301.1	Gna11		ILMN_2751072	005720576	S	964	GGCCGCACGCGAGTTCATTCTGAAGATGTTTGTGGACCTGAACCCTGACA						Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that modulates the frequency, rate or extent of melanocyte differentiation [goid 45634] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]		
Mus musculus	RefSeq	ILMN_212681	ILMN_212681	ANKRD17	NM_198010.2	NM_198010.2		81702	40549394	NM_198010.2	Ankrd17	NP_932127.2	ILMN_2675464	006650564	S	7673	GTGAGATATGTACCTTCATATTCAGAAATCTGGATGTCTCCTTCATACAT	5	-	90657782-90657831	5qE1	Mus musculus ankyrin repeat domain 17 (Ankrd17), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU040470; Foe; Gtar; 4933425K22Rik; Mask; AA516750; mKIAA0697; A130069E23Rik; AA407558; A930008M01	AU040470; Foe; Gtar; 4933425K22Rik; Mask; AA516750; mKIAA0697; A130069E23Rik; AA407558; A930008M01
Mus musculus	RefSeq	ILMN_212681	ILMN_212681	ANKRD17	NM_198010.2	NM_198010.2		81702	40549394	NM_198010.2	Ankrd17	NP_932127.2	ILMN_2629147	002850605	S	9079	CCTCCTAGCGAGTGTCTTACTGAAAAAGGAAGAAGGGTGGGAAAGCGAGT	5	-	90656376-90656425	5qE1	Mus musculus ankyrin repeat domain 17 (Ankrd17), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU040470; Foe; Gtar; 4933425K22Rik; Mask; AA516750; mKIAA0697; A130069E23Rik; AA407558; A930008M01	AU040470; Foe; Gtar; 4933425K22Rik; Mask; AA516750; mKIAA0697; A130069E23Rik; AA407558; A930008M01
Mus musculus	RefSeq	ILMN_212681	ILMN_212681	ANKRD17	NM_198010.2	NM_198010.2		81702	40549394	NM_198010.2	Ankrd17	NP_932127.2	ILMN_3126458	001010634	A	9007	TAATAGAGTTGGAGAACAGACACTACTCAGGGTGTGCTGCCACGTGTGAG	5	-	90656448-90656497	5qE1	Mus musculus ankyrin repeat domain 17 (Ankrd17), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU040470; Foe; Gtar; 4933425K22Rik; Mask; AA516750; mKIAA0697; A130069E23Rik; AA407558; A930008M01	AU040470; Foe; Gtar; 4933425K22Rik; Mask; AA516750; mKIAA0697; A130069E23Rik; AA407558; A930008M01
Mus musculus	RefSeq	ILMN_215064	ILMN_215064	GCHFR	NM_177157.4	NM_177157.4		320415	141803176	NM_177157.4	Gchfr	NP_796131.1	ILMN_2655126	007570411	S	120	TCGGATCCGGAGCTGATGCAGCACCTGGGGGCCTCCAAGAGAAGTGTCTT	2	+	118995445-118995494	2qE5	Mus musculus GTP cyclohydrolase I feedback regulator (Gchfr), mRNA.		Any process that stops, prevents, or reduces the rate of the chemical reactions and pathways resulting in the formation of substances [goid 9890] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2010323F13Rik; P35; GFRP	2010323F13Rik; P35; GFRP
Mus musculus	RefSeq	ILMN_215064	ILMN_215064	GCHFR	NM_177157.4	NM_177157.4		320415	141803176	NM_177157.4	Gchfr	NP_796131.1	ILMN_2744603	001340711	S	396	CAACTCCCTTGCCCAATACTGGTGGGCTGTGAACAGCCTAAGGGACCTCG	2	+	118997892-118997941	2qE5	Mus musculus GTP cyclohydrolase I feedback regulator (Gchfr), mRNA.		Any process that stops, prevents, or reduces the rate of the chemical reactions and pathways resulting in the formation of substances [goid 9890] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2010323F13Rik; P35; GFRP	2010323F13Rik; P35; GFRP
Mus musculus	RefSeq	ILMN_197191	ILMN_315156	LOC670357	XR_031421.1	XR_031421.1		670357	149264218	XR_031421.1	LOC670357		ILMN_1238503	000670768	S	2969	AAAGGAGCCCTGTCCACATAGAAGCCATAGAAGCCACGAGGGGCACAGGC	13	-	49880465-49880514	13qA5	PREDICTED: Mus musculus hypothetical LOC670357 (LOC670357), misc RNA.					
Mus musculus	MEEBO	ILMN_210557	ILMN_210557	C030033M19RIK	scl0226928.1_84	NM_183018.1			33942084	NM_183018.1	C030033M19Rik		ILMN_1233523	003310403	S	1722	GCTGGGGATGAAGGCTAACCACATAGTAGTGCTTTGGAAACCCTTTCCGA										
Mus musculus	RefSeq	ILMN_209236	ILMN_209236	ADRM1	NM_019822.3	NM_019822.3		56436	118130567	NM_019822.3	Adrm1	NP_062796.2	ILMN_2601590	004010215	S	1129	TTCAGTGCGGCCTTGGCCTCAGGACAGCTTGGCCCTCTCATGTGCCAGTT	2	+	179910571-179910620	2qH4	Mus musculus adhesion regulating molecule 1 (Adrm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			AA408205; 2510006J17Rik; Arm1; ARM-1; 1110063P18Rik; AU043535; Gp110	AA408205; 2510006J17Rik; Arm1; ARM-1; 1110063P18Rik; AU043535; Gp110
Mus musculus	RefSeq	ILMN_214959	ILMN_214959	LIMK1	NM_010717.2	NM_010717.2		16885	128485824	NM_010717.2	Limk1	NP_034847.1	ILMN_2653927	002650156	S	3107	CCATGTCTTCACTCCGCTTCAGTTGACCATCTAGGGCATATTAAACTGTG	5	-	135137716-135137728:135137973-135138009	5qG2	Mus musculus LIM-domain containing, protein kinase (Limk1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of axon extension [goid 45773] [evidence IGI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	Riken	ILMN_201876	ILMN_201876	4921518G09RIK	ri|4921518G09|PX00014M08|AK014919|1037					AK014919	4921518G09Rik		ILMN_1219348	007550544	S	713	GCTCTCCTATAGAACCCAGGACTACCAGCCCAGGTCAACCATTCGAGTAT										
Mus musculus	RefSeq	ILMN_223447	ILMN_223447	D230044M03RIK	XM_354583.3	XM_354583.3		76743	94387985	XM_354583.3	D230044M03Rik	XP_354583.1	ILMN_1227984	006220259	S	685	CCGGGTTGATAGCCTATTACCATACCATAGTTCCTATCAGTCATTTATAC	10	-	14436174-14436223	10qA2	PREDICTED: Mus musculus RIKEN cDNA D230044M03 gene (D230044M03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187172	ILMN_187172	ZFP286	NM_138949.3	NM_138949.3		192651	113865961	NM_138949.3	Zfp286	NP_620399.3	ILMN_2498321	007330564	S	1730	GGTTGGCTTTATTGCTGCGTTTCATATTTGATTGTTGAAATAGAGAGACC	11	-	62593115-62593164	11qB2	Mus musculus zinc finger protein 286 (Zfp286), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC027023; MGC39058; RP23-59B16.5	BC027023; MGC39058; RP23-59B16.5
Mus musculus	RefSeq	ILMN_187172	ILMN_187172	ZFP286	NM_138949.3	NM_138949.3		192651	113865961	NM_138949.3	Zfp286	NP_620399.3	ILMN_2441785	003180452	S	2710	CCACGGATAAACATCTTTTTCCTCCACTTACCTGGCTTTCATGCTTGCTC	11	-	62592135-62592184	11qB2	Mus musculus zinc finger protein 286 (Zfp286), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC027023; MGC39058; RP23-59B16.5	BC027023; MGC39058; RP23-59B16.5
Mus musculus	MEEBO	ILMN_194709	ILMN_194709	IMAP38	scl978.1.1_59				28559036	NM_008376	Imap38		ILMN_2722346	004570253	S	943	TGTGGGGATGGCGGAAATTCTACTGGAAGGGCTGGAGGCGTGGTTTCTCT										
Mus musculus	RefSeq	ILMN_184745	ILMN_237620	IL6RA	NM_010559.2	NM_010559.2		16194	110431355	NM_010559.2	Il6ra	NP_034689.2	ILMN_1216057	006100369	S	1101	CCCCACACAGGTCTCTGTTGAAGACTCTGCCAACCACGAGGATCAGTACG	3	-	89681795-89681835:89682771-89682779	3qF1	Mus musculus interleukin 6 receptor, alpha (Il6ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	Il6r; IL-6R; CD126; MGC30256	Il6r; IL-6R; CD126; MGC30256
Mus musculus	RefSeq	ILMN_184745	ILMN_237620	IL6RA	NM_010559.2	NM_010559.2		16194	110431355	NM_010559.2	Il6ra	NP_034689.2	ILMN_2706430	001240368	S	1203	CATGTCCCTGCCCACATTCCTGGTAGCTGGAGGAAGCTTGGCGTTTGGGT	3	-	89680758-89680807	3qF1	Mus musculus interleukin 6 receptor, alpha (Il6ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	Il6r; IL-6R; CD126; MGC30256	Il6r; IL-6R; CD126; MGC30256
Mus musculus	RefSeq	ILMN_202748	ILMN_237620	IL6RA	NM_010559.2	NM_010559.2		16194	110431355	NM_010559.2	Il6ra	NP_034689.2	ILMN_1255743	000010121	S	2445	CTACTGTATGAACCCTCACTGCCCACCCTGGAGGACCAAGTGCAGTAACG	3	-	89674094-89674143	3qF1	Mus musculus interleukin 6 receptor, alpha (Il6ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	Il6r; IL-6R; CD126; MGC30256	Il6r; IL-6R; CD126; MGC30256
Mus musculus	Riken	ILMN_206475	ILMN_206475	D430003M24RIK	ri|D430003M24|PX00193I10|AK084863|3244					AK084863	D430003M24Rik		ILMN_1219548	004180438	S	3113	GCCTCAAACCCACCGTACTCCTGCCTCAGTCTGTTCAGTGCTAGGGTTAC										
Mus musculus	RefSeq	ILMN_255503	ILMN_255503	AU022751	NM_001033211.1	NM_001033211.1		102991	85701723	NM_001033211.1	AU022751	NP_001028383.1	ILMN_2845025	005720072	S	1543	GTGAGGGTTCTCCCAGGTGCAGAAAAGGAATTGGCACGTATCCCCTGTTG	X	-	5256940-5256989	XqA1.1	Mus musculus expressed sequence AU022751 (AU022751), mRNA.				AU023811; MGC117813	AU023811; MGC117813
Mus musculus	RefSeq	ILMN_197208	ILMN_324203	D2BWG1423E	XM_001477269.1	XM_001477269.1		329372	149249154	XM_001477269.1	D2Bwg1423e	XP_001477319.1	ILMN_2527300	000870554	S	1218	GCAGACACCCTGGATACATCTCTTTGAGCTCAGCAGTATTGCAGCGGCAG				2qA3	PREDICTED: Mus musculus DNA segment, Chr 2, Brigham & Women's Genetics 1423 expressed (D2Bwg1423e), mRNA.					
Mus musculus	RefSeq	ILMN_194127	ILMN_324203	D2BWG1423E	XM_001477269.1	XM_001477269.1		329372	149249154	XM_001477269.1	D2Bwg1423e	XP_001477319.1	ILMN_2503655	006620725	S	245	GTGTCCTTAAGCAAAATGTGCCCCGAAGTGATTCCAAGCCTAATCGAGTG				2qA3	PREDICTED: Mus musculus DNA segment, Chr 2, Brigham & Women's Genetics 1423 expressed (D2Bwg1423e), mRNA.					
Mus musculus	MEEBO	ILMN_212259	ILMN_212259	MLANA	scl53223.5.1_11	XM_129166.1			20887348	XM_129166.1	Mlana		ILMN_2624504	001300647	S	463	GCCTATGAGAAGCTCTCTTCACCGCCACCTTATTCACCCTGAGAGCCGGG										
Mus musculus	RefSeq	ILMN_215845	ILMN_215845	BC055111	NM_183182.2	NM_183182.2		242602	141801289	NM_183182.2	BC055111	NP_899005.1	ILMN_2664291	000990095	S	1137	ACATGAGTGAGCCCAAGCGATACCTGCAAGACCTAACCCGAGACAGACTC	4	-	106279898-106279947	4qC7	Mus musculus cDNA sequence BC055111 (BC055111), mRNA.				MGC58608	MGC58608
Mus musculus	RefSeq	ILMN_194314	ILMN_249135	DUSP28	NM_175118.3	NM_175118.3		67446	75750527	NM_175118.3	Dusp28	NP_780327.1	ILMN_2776681	001450681	S	639	GGCTTTGGGTGTTGCCCCATCTTGATGGTAGTACAGGAACGTCTACTGAG	1	+	94804345-94804394	1qD	Mus musculus dual specificity phosphatase 28 (Dusp28), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	AV005521; 0710001B24Rik	AV005521; 0710001B24Rik
Mus musculus	RefSeq	ILMN_219427	ILMN_219427	OLFR370	NM_146270.1	NM_146270.1		258267	22129744	NM_146270.1	Olfr370	NP_666382.1	ILMN_2708751	005810017	S	803	CCAGCCAGGATGCGCTGATATCAGTATCCTACACTATCCTAACTCCGTTA	8	+	86065847-86065896	8qC2	Mus musculus olfactory receptor 370 (Olfr370), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-16	MOR267-16
Mus musculus	RefSeq	ILMN_217374	ILMN_259975	NEGR1	NM_001039094.2	NM_001039094.2		320840	142348257	NM_001039094.2	Negr1	NP_001034183.1	ILMN_2689346	000070204	S	1246	CGCAGGAGCACTTCGGCAACTATACTTGTGTGGCTGCCAACAAGTTGGGT	3	+	156823624-156823673	3qH4	Mus musculus neuronal growth regulator 1 (Negr1), transcript variant 1, mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA3001; 5330422G01Rik; KILON; Ntra	mKIAA3001; 5330422G01Rik; KILON; Ntra
Mus musculus	RefSeq	ILMN_187279	ILMN_238924	RAB11FIP2	NM_001033172.2	NM_001033172.2		74998	142351808	NM_001033172.2	Rab11fip2	NP_001028344.1	ILMN_2442732	003060114	S	4315	CACGAGTGGAAACCTAAGTAAATAAGCTCATTAGTGACAAACCTGCTTCT	19	-	59979716-59979765	19qD3	Mus musculus RAB11 family interacting protein 2 (class I) (Rab11fip2), mRNA.				Rab11-FIP2; 4930470G04Rik; A830046J09Rik; nRip11	Rab11-FIP2; 4930470G04Rik; A830046J09Rik; nRip11
Mus musculus	Riken	ILMN_202496	ILMN_202496	2310045I24RIK	ri|2310045I24|ZX00040O09|AK009820|1137					AK009820	2310045I24Rik		ILMN_1251457	003400373	S	117	CAAGTTGGGGGTCTTTGCTGGCACTGTCCTACTAGATGCTGGGTACTGAC										
Mus musculus	Riken	ILMN_204901	ILMN_204901	A530089A20RIK	ri|A530089A20|PX00143M04|AK041191|1821					AK041191	A530089A20Rik		ILMN_2568488	005870709	S	1231	GGTAGTGCAAGTTGTGGGACCAGTTTTCGAGGAACAGTTGGACGGACTAC										
Mus musculus	Riken	ILMN_201779	ILMN_201779	2810404O06RIK	ri|2810404O06|ZX00053O03|AK012987|828					AK012987	2810404O06Rik		ILMN_1214158	006040576	S	502	CTCACCACTTAGGAGACTGAGGCAGCAGGTACATGAATGAGTTCAAGTCC										
Mus musculus	RefSeq	ILMN_218189	ILMN_218189	RTN4	NM_194051.2	NM_194051.2		68585	142351890	NM_194051.2	Rtn4	NP_918940.1	ILMN_2692728	007400270	S	135	GCCAAGTCGCTGGTTCCCATTCCAGCACGAAGTTCTCGCCTATCAGCAGC	11	+	29593908-29593957	11qA3.3	Mus musculus reticulon 4 (Rtn4), transcript variant 5, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISS]	Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence ISO]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	mKIAA4153; KIAA4153; ASY; NSP-CL; 1110020G17Rik; C130026I10Rik; AA960376; mKIAA0886; NOGO; AA409940; AA407876	mKIAA4153; KIAA4153; ASY; NSP-CL; 1110020G17Rik; C130026I10Rik; AA960376; mKIAA0886; NOGO; AA409940; AA407876
Mus musculus	RefSeq	ILMN_193887	ILMN_259594	DYRK1A	NM_007890.1	NM_007890.1		13548	24418934	NM_007890.1	Dyrk1a	NP_031916.1	ILMN_2622345	000990056	S	2405	GCTGCTTGAATCAGAAGGAGATTAACACACTGAACCGCTACAAGAGGGCA	16	+	94896155-94896157:94899059-94899105	16qC4	Mus musculus dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a (Dyrk1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence ISO]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Mnbh; mmb; D16Ertd272e; MGC150254; 2310043O08Rik; MGC150253; Dyrk; D16Ertd493e	Mnbh; mmb; D16Ertd272e; MGC150254; 2310043O08Rik; MGC150253; Dyrk; D16Ertd493e
Mus musculus	MEEBO	ILMN_223489	ILMN_223489	BC003498	scl34743.1.1_137	NM_030263.2			31542184	NM_030263.2	BC003498		ILMN_2764744	003830176	S	2336	GGGCCAGCGGATATGTATAGAAGATGTGATGTAGACAAGTATCTTTCTCT										
Mus musculus	RefSeq	ILMN_196342	ILMN_196342	A830007P12RIK	NM_146115.3	NM_146115.3		227612	142370326	NM_146115.3	A830007P12Rik	NP_666227.2	ILMN_1219067	005870669	S	2803	CCATCTACAGAGCGACTAAGTGAGGGTACAAACCCGAGCAGCATCTCCTC	2	-	25048615-25048664	2qA3	Mus musculus RIKEN cDNA A830007P12 gene (A830007P12Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	RP23-132N23.3; MGC7940	RP23-132N23.3; MGC7940
Mus musculus	RefSeq	ILMN_197146	ILMN_197146	LOC381344	XM_355307.1	XM_355307.1			38074288	XM_355307.1	LOC381344		ILMN_1241402	001010193	S	633	TGGCATCTCAAAGAGCCTTCTCTACAGGGTCCAGTGTGTCATGGAAAAGG										
Mus musculus	RefSeq	ILMN_200671	ILMN_200671	LOC384455	XM_357657.1	XM_357657.1			38085046	XM_357657.1	LOC384455		ILMN_2539585	001170315	S	500	TCTTCAACAACAGATTCATCAACTGGTTCCCAGCTATGGAGACTGAGGCC										
Mus musculus	RefSeq	ILMN_187645	ILMN_243821	NKX2-2	NM_010919.2	NM_010919.2		18088	117647241	NM_010919.2	Nkx2-2	NP_035049.1	ILMN_1221619	004880367	S	1770	TATCGCTAGTGATCGTTGCCAAATGACGTTCTGGATGGGCCTGTATCCCC	2	-	147009117-147009166	2qG2	Mus musculus NK2 transcription factor related, locus 2 (Drosophila) (Nkx2-2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IMP]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IMP]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of oligodendrocytes. Oligodendrocytes are non-neuronal cells. The primary function of oligodendrocytes is the myelination of nerve axons in the central nervous system. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21529] [evidence IMP]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of oligodendrocytes. Oligodendrocytes are non-neuronal cells. The primary function of oligodendrocytes is the myelination of nerve axons in the central nervous system. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21529] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into an oligodendrocyte in an environment that is neutral with respect to the developmental pathway [goid 21530] [evidence IDA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The process whereby a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed [goid 48665] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Nkx-2.2; Nkx2.2; tinman	Nkx-2.2; Nkx2.2; tinman
Mus musculus	RefSeq	ILMN_214424	ILMN_214424	1110036O03RIK	NM_176830.2	NM_176830.2		66180	31560877	NM_176830.2	1110036O03Rik	NP_789800.1	ILMN_1231457	000990128	S	1487	CTGACATAAGGCGGTGACATGGCGCACTCTTCAAGCTCAGGACACCTGGC	11	-	100270394-100270435:100270436-100270443	11qD	Mus musculus RIKEN cDNA 1110036O03 gene (1110036O03Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AI413214; Sc65; RP23-392I3.4	AI413214; Sc65; RP23-392I3.4
Mus musculus	RefSeq	ILMN_216337	ILMN_216337	OLFR186	NM_146321.1	NM_146321.1		258318	22129654	NM_146321.1	Olfr186	NP_666433.1	ILMN_2669909	002120528	S	554	ATAATATTTCCTGTACTGATCCTACTCTTAATCTCCTATTAGTATTTATT	16	-	59027128-59027177	16qC1.3	Mus musculus olfactory receptor 186 (Olfr186), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR183-9	MOR183-9
Mus musculus	RefSeq	ILMN_237949	ILMN_237949	CCDC142	NM_001081266.1	NM_001081266.1		243510	124486906	NM_001081266.1	Ccdc142	NP_001074735.1	ILMN_3023885	000290373	I	1925	AAGACTTCGGAGTGGTCAGGGAGGTTCTGGAACAAGAGCAGTGGGGCCTG	6	+	83057775-83057824	6qC3	Mus musculus coiled-coil domain containing 142 (Ccdc142), mRNA.				A230058J24Rik	A230058J24Rik
Mus musculus	RefSeq	ILMN_214600	ILMN_214600	CENPC1	NM_007683.2	NM_007683.2		12617	141802028	NM_007683.2	Cenpc1	NP_031709.1	ILMN_2649740	004860575	S	2829	TCAAATAAAAAGGTGAAATAAATGTGTATGTATATAAAATACGTTGTTTA	5	-	86441250-86441281:86441282-86441299	5qE1	Mus musculus centromere protein C1 (Cenpc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cenpc	Cenpc
Mus musculus	RefSeq	ILMN_201293	ILMN_201293	LOC382383	XM_356475.1	XM_356475.1			38090616	XM_356475.1	LOC382383		ILMN_2541777	003370500	S	2084	GATGGTTGCTGACATCACAGGTCCCTAAATTTGTCATTCCAGTTTGCACC										
Mus musculus	MEEBO	ILMN_192916	ILMN_192916	SLC19A3	scl16548.9_296				13385307	NM_030556	Slc19a3		ILMN_2728643	006130382	S	1402	GCCCTGGTGTTCGGCATAGACACCTTTATCGCCTTGGTGATTCAGACCAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 15884] [evidence ISO]; The directed movement of thiamin into, out of, within or between cells. Thiamin is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 15888] [evidence ISO]	Catalysis of the transfer of reduced folate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8518] [evidence IEA]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [evidence ISO]; Catalysis of the transfer of thiamin from one side of the membrane to the other. Thiamin is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 15234] [evidence ISO]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]		
Mus musculus	Riken	ILMN_201980	ILMN_201980	1700015E05RIK	ri|1700015E05|ZX00037G01|AK005989|1942					AK005989	1700015E05Rik		ILMN_1235060	006110561	S	1618	CCCTGCTTTCTTCTGTGTTCATTTCTCTGCGGCCATGGGGAAGGCACCTG										
Mus musculus	RefSeq	ILMN_222221	ILMN_222221	UGT2B34	NM_153598.2	NM_153598.2		100727	118130096	NM_153598.2	Ugt2b34	NP_705826.1	ILMN_2746475	004230358	S	2445	CCTACATTTGTCTTTAGAACACTTGTACTTTTGCAGACTCTCATGTGGTG	5	-	87319348-87319397	5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide B34 (Ugt2b34), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC37823; AI788959	MGC37823; AI788959
Mus musculus	RefSeq	ILMN_221734	ILMN_236973	CDH9	XM_986179.2	XM_986179.2		12565	149266435	XM_986179.2	Cdh9	XP_991273.2	ILMN_1255228	004900626	S	2102	GGACAGTACCCCTCTGGGAAAATATTGACGTACAAGATTTTATACACCGG	15	+	16785732-16785781	15qA2	PREDICTED: Mus musculus cadherin 9 (Cdh9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191033	ILMN_234959	MSL2L1	XM_150227.8	XM_150227.8		77853	94386513	XM_150227.8	Msl2l1	XP_150227.6	ILMN_2498779	002360414	S	3809	CAAAGTGGACATTAGTATGTGAGGGCCTTGATTGATCTGTAATATTGCCA	9	+	101006555-101006604	9qE4	PREDICTED: Mus musculus male-specific lethal 2-like 1 (Drosophila) (Msl2l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191033	ILMN_234959	MSL2L1	XM_150227.8	XM_150227.8		77853	94386513	XM_150227.8	Msl2l1	XP_150227.6	ILMN_2475491	004490022	S	2390	CACAAATGTTAAGCTGTTTATGCTTTAAATATTTATGAGTTCAGCCCTCC	9	+	101005136-101005185	9qE4	PREDICTED: Mus musculus male-specific lethal 2-like 1 (Drosophila) (Msl2l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214446	ILMN_234959	MSL2L1	XM_150227.8	XM_150227.8		77853	94386513	XM_150227.8	Msl2l1	XP_150227.6	ILMN_2743780	005270594	S	6650	ATGGGACATCCCATGGAAACCTCTCACTATACACACTCCGTCCCCTCTCT	9	+	101009396-101009445	9qE4	PREDICTED: Mus musculus male-specific lethal 2-like 1 (Drosophila) (Msl2l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191033	ILMN_234959	MSL2L1	XM_150227.8	XM_150227.8		77853	94386513	XM_150227.8	Msl2l1	XP_150227.6	ILMN_1243234	007330324	S	1440	CCGCGGCCAACGCTGCCCTTGCTACTCTAACCGGAAAGCCTGCTTAGATT	9	+	101004186-101004235	9qE4	PREDICTED: Mus musculus male-specific lethal 2-like 1 (Drosophila) (Msl2l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213545	ILMN_321911	LOC624083	XR_035632.1	XR_035632.1		624083	149254503	XR_035632.1	LOC624083		ILMN_1231083	006450253	S	906	GGACCCGAGTCAGTGGTAAAAGATGACTCTCCAGCAGCAAATGACCTGGC				5qG2	PREDICTED: Mus musculus similar to RIKEN cDNA 5830484A20 gene (LOC624083), misc RNA.					
Mus musculus	MEEBO	ILMN_196188	ILMN_196188	9430025M21RIK	scl16709.1.506_56				51705041	XM_355205	9430025M21Rik		ILMN_2526236	005290241	S	1925	GCACTCAGCTGGAAGAGTCCAGCCAGAATGGAGTCTATGAATCGGTCCTA										
Mus musculus	RefSeq	ILMN_185337	ILMN_243300	SREBF2	NM_033218.1	NM_033218.1		20788	73661203	NM_033218.1	Srebf2	NP_150087.1	ILMN_1223598	004830129	S	4087	GGGTCTGCACTCCCTCCCCTGTGCCTGACTAAGCCTTGTTCATTGTTCTT	15	+	82034907-82034956	15qE1	Mus musculus sterol regulatory element binding factor 2 (Srebf2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AI608257; SREBP-2; SREBP2; SREBP2gc	AI608257; SREBP-2; SREBP2; SREBP2gc
Mus musculus	RefSeq	ILMN_255833	ILMN_255833	OTTMUSG00000016293	NM_001040055.1	NM_001040055.1		641368	91206445	NM_001040055.1	OTTMUSG00000016293	NP_001035144.1	ILMN_2858548	002900639	S	242	AACCCAGAATCGGCCCTATGTGAGTCCTTCATCTTCACTGGCTGCGGGGG	2	+	164542557-164542606	2qH3	Mus musculus predicted gene, OTTMUSG00000016293 (OTTMUSG00000016293), mRNA.				Spint5; RP23-370H21.10	Spint5; RP23-370H21.10
Mus musculus	RefSeq	ILMN_220414	ILMN_220414	DPP9	NM_172624.2	NM_172624.2		224897	141801828	NM_172624.2	Dpp9	NP_766212.1	ILMN_2721724	005690689	S	2900	GCCGCCCTCCTTGAGCTGGTGAGGAGAAGTCGCCATTGAGCACACAACCT	17	-	56326611-56326660	17qD	Mus musculus dipeptidylpeptidase 9 (Dpp9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	A330078I11; 6430584G11Rik; DPRP2	A330078I11; 6430584G11Rik; DPRP2
Mus musculus	RefSeq	ILMN_222652	ILMN_313095	LOC100039974	XM_001473879.1	XM_001473879.1		100039974	149252584	XM_001473879.1	LOC100039974	XP_001473929.1	ILMN_2752920	003460154	S	478	CTCTATATAAGATGATAGTTTCTCATTTTGGATAAAAATACCAGTTCCCA	4	-	77571314-77571363	4qC3	PREDICTED: Mus musculus hypothetical protein LOC100039974 (LOC100039974), mRNA.					
Mus musculus	RefSeq	ILMN_198242	ILMN_198242	LOC224989	XM_140109.2	XM_140109.2			38083249	XM_140109.2	LOC224989		ILMN_1251357	003180653	S	14	CAAACACCAAGCAGAAGGATGGTGAGAAGACTTCGCAGGGAGCGTCCCCC										
Mus musculus	RefSeq	ILMN_184371	ILMN_235437	EPN2	NM_010148.2	NM_010148.2		13855	118129929	NM_010148.2	Epn2	NP_034278.1	ILMN_2659617	002260280	S	4061	CACACGTGCCACCATGCCCTTCTTGATGAATACCCTGAAGGAAGTCACCC	11	-	61330849-61330898	11qB2	Mus musculus epsin 2 (Epn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	AA536924; 9530051D10Rik; Ibp2	AA536924; 9530051D10Rik; Ibp2
Mus musculus	RefSeq	ILMN_184371	ILMN_235437	EPN2	NM_010148.2	NM_010148.2		13855	118129929	NM_010148.2	Epn2	NP_034278.1	ILMN_1218487	007320291	S	2880	ACAAAAACTTCCAACAATAACAAACCCCGCAGCCTCTAGTTGCCTTTTTC	11	-	61332030-61332079	11qB2	Mus musculus epsin 2 (Epn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	AA536924; 9530051D10Rik; Ibp2	AA536924; 9530051D10Rik; Ibp2
Mus musculus	RefSeq	ILMN_187710	ILMN_235437	EPN2	NM_010148.2	NM_010148.2		13855	118129929	NM_010148.2	Epn2	NP_034278.1	ILMN_1225770	002680224	S	2930	GGAAAAAGGCAACTAGAGGCTGCGGGGTTTGTTATTGTTGGAAGTTTTTG	11	-	61331980-61332029	11qB2	Mus musculus epsin 2 (Epn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	AA536924; 9530051D10Rik; Ibp2	AA536924; 9530051D10Rik; Ibp2
Mus musculus	RefSeq	ILMN_235437	ILMN_235437	EPN2	NM_010148.2	NM_010148.2		13855	118129929	NM_010148.2	Epn2	NP_034278.1	ILMN_3158060	002650605	A	3544	AACCTTAAGCTCCAAGGACACCCAGCCACCTGCCAGCTCCTCTCTGCATC	11	-	61331366-61331415	11qB2	Mus musculus epsin 2 (Epn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	AA536924; 9530051D10Rik; Ibp2	AA536924; 9530051D10Rik; Ibp2
Mus musculus	RefSeq	ILMN_184371	ILMN_235437	EPN2	NM_010148.2	NM_010148.2		13855	118129929	NM_010148.2	Epn2	NP_034278.1	ILMN_1239027	001240332	S	2449	TTTTATTTTCCTTTGACTCAATGTGAGTCCAAGGTGAACACTCCTACCAG	11	-	61332461-61332510	11qB2	Mus musculus epsin 2 (Epn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	AA536924; 9530051D10Rik; Ibp2	AA536924; 9530051D10Rik; Ibp2
Mus musculus	RefSeq	ILMN_190204	ILMN_235437	EPN2	NM_010148.2	NM_010148.2		13855	118129929	NM_010148.2	Epn2	NP_034278.1	ILMN_2468078	001050474	S	2498	CTGGTAGGAGTGTTCACCTTGGACTCACATTGAGTCAAAGGAAAATAAAA	11	-	61332412-61332461	11qB2	Mus musculus epsin 2 (Epn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	AA536924; 9530051D10Rik; Ibp2	AA536924; 9530051D10Rik; Ibp2
Mus musculus	RefSeq	ILMN_191207	ILMN_235437	EPN2	NM_010148.2	NM_010148.2		13855	118129929	NM_010148.2	Epn2	NP_034278.1	ILMN_2477098	006480553	S	3107	CCCTGCATTCCAGGTACAAAAAGGGATTAGTTGATAAAAACTGGCAAGTC	11	-	61331803-61331852	11qB2	Mus musculus epsin 2 (Epn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	AA536924; 9530051D10Rik; Ibp2	AA536924; 9530051D10Rik; Ibp2
Mus musculus	RefSeq	ILMN_253156	ILMN_253156	NXF3	NM_001024141.1	NM_001024141.1		245610	66571304	NM_001024141.1	Nxf3	NP_001019312.1	ILMN_2987965	007150196	S	1634	CTCTCAAGATCAACAGGAGATGGTGCCAACATTCTGTGCCCAGTCTGGGG	X	-	131420238-131420287	XqF1	Mus musculus nuclear RNA export factor 3 (Nxf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm [goid 16973] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]	Gm384	Gm384
Mus musculus	RefSeq	ILMN_207021	ILMN_325283	LOC433711	XR_035311.1	XR_035311.1		433711	149252417	XR_035311.1	LOC433711		ILMN_1240826	006520195	S	1535	CCAGGCAGTGGTGGCACAAGCCTTTAATCCTAGTATTTGGGAGAAAGAAG	4	-	58661430-58661479	4qB3	PREDICTED: Mus musculus hypothetical gene supported by AK078800 (LOC433711), misc RNA.					
Mus musculus	RefSeq	ILMN_186736	ILMN_329960	TSPYL5	NM_001085421.1	NM_001085421.1		239364	146149269	NM_001085421.1	Tspyl5	NP_001078890.1	ILMN_1246539	006400661	S	1008	GGCTGTGGTCCATCCGGTCAAGTGGTGTCTCGTTCAGCTCCAATCCAGTG				15qB3.1	Mus musculus testis-specific protein, Y-encoded-like 5 (Tspyl5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		6330530B20; E130308C19Rik	6330530B20; E130308C19Rik
Mus musculus	RefSeq	ILMN_186736	ILMN_329960	TSPYL5	NM_001085421.1	NM_001085421.1		239364	146149269	NM_001085421.1	Tspyl5	NP_001078890.1	ILMN_1240676	003060719	S	3781	GGCACTTGAGACCCTTTTCTCCTTTGTAACATAGAGACTTGTATGGACTG				15qB3.1	Mus musculus testis-specific protein, Y-encoded-like 5 (Tspyl5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		6330530B20; E130308C19Rik	6330530B20; E130308C19Rik
Mus musculus	RefSeq	ILMN_217872	ILMN_217872	PXMP4	NM_021534.3	NM_021534.3		59038	142365206	NM_021534.3	Pxmp4	NP_067509.1	ILMN_2688639	002100717	S	840	ACCCAGGCTCCCATTTGCTGAAGTAAAAGTACTGAGTTTTCCACTTACCA	2	-	154413358-154413407	2qH1	Mus musculus peroxisomal membrane protein 4 (Pxmp4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Pmp24; 3010018P03Rik	Pmp24; 3010018P03Rik
Mus musculus	RefSeq	ILMN_200936	ILMN_200936	LOC384660	XM_357771.1	XM_357771.1			38087171	XM_357771.1	LOC384660		ILMN_1256345	006330184	S	83	AAGGCTCTCACCAGCGGGATGCTCAAGGTTCTCACCAGCGGGATGCTCAA										
Mus musculus	Riken	ILMN_207156	ILMN_207156	F730028J12RIK	ri|F730028J12|PL00003M24|AK089433|2176					AK089433	F730028J12Rik		ILMN_1221825	003890142	S	1836	CATGCAGGCAGACAAGGTAGCTGAGAGAGAAAGCCACACTGGACCTGGCT										
Mus musculus	RefSeq	ILMN_244362	ILMN_244362	GPRK6	NM_001038018.1	NM_001038018.1		26385	84000006	NM_001038018.1	Gprk6	NP_001033107.1	ILMN_3086889	000070278	A	1568	CACAGGCAGTGTGTCCATCCCCTGGCAGAATGAGATGGTGGAGACCGAGT	13	+	55468543-55468552:55468635-55468674	13qB1	Mus musculus G protein-coupled receptor kinase 6 (Gprk6), transcript variant 1, mRNA.				GRK6	GRK6
Mus musculus	RefSeq	ILMN_193795	ILMN_193795	TMEM18	NM_172049.1	NM_172049.1		211986	25286704	NM_172049.1	Tmem18	NP_742046.1	ILMN_1245565	004250491	S	2789	CTGAGTAGTTGTGGAAAGCTCTGGAAAGCCCTAAAATAACCATCTTATAC	12	+	31275973-31276022	12qA2	Mus musculus transmembrane protein 18 (Tmem18), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BC024093	BC024093
Mus musculus	RefSeq	ILMN_190688	ILMN_229145	RBPMS	NM_019733.2	NM_019733.2		19663	111185954	NM_019733.2	Rbpms	NP_062707.1	ILMN_1223614	001170671	S	879	CCGGCAGTTCTGCTGAGGCTGTGTCTCGGGTGTGTGATGGCGGCTGCAAT	8	-	34899939-34899967:34905554-34905559:34905560-34905574	8qA4	Mus musculus RNA binding protein gene with multiple splicing (Rbpms), transcript variant 1, mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2010300K22Rik; 2700019M19Rik; hermes; AU017537	2010300K22Rik; 2700019M19Rik; hermes; AU017537
Mus musculus	Riken	ILMN_203033	ILMN_203033	6720458L19RIK	ri|6720458L19|PX00059P12|AK032827|3258					AK032827	6720458L19Rik		ILMN_1256914	002680356	S	3000	CCAGGCTCACTGCTGCTCATCCAGGAAACATCGCAGGCACTCTGAGAAAG										
Mus musculus	RefSeq	ILMN_205512	ILMN_235608	2610207F23RIK	XM_982429.1	XM_982429.1		67161	94369526	XM_982429.1	2610207F23Rik	XP_987523.1	ILMN_1250391	001030398	S	2480	CGTCCCAGCAGGTAAGGGACACCCTCATTACCCAAGGCTGATAAACAACC	3	-	41726027-41726036:41726037-41726076	3qB	PREDICTED: Mus musculus RIKEN cDNA 2610207F23 gene, transcript variant 2 (2610207F23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216503	ILMN_216503	RELL2	NM_153793.1	NM_153793.1		225392	24418898	NM_153793.1	Rell2	NP_722488.1	ILMN_2671794	004180152	S	451	TGATCTGCCACGTGCTCAAGAAGAAAGGCTACCGCTGCCGCACGTCTAGG	18	+	38116149-38116198	18qB3	Mus musculus RELT-like 2 (Rell2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			MGC47374; 4631403P03Rik	MGC47374; 4631403P03Rik
Mus musculus	RefSeq	ILMN_216503	ILMN_216503	RELL2	NM_153793.1	NM_153793.1		225392	24418898	NM_153793.1	Rell2	NP_722488.1	ILMN_2916437	006350681	S	1955	GCTTGGACTTCATACCCTTTATTCACTGTCAATAAATCCGCTCAGACCAA	18	+	38118780-38118817	18qB3	Mus musculus RELT-like 2 (Rell2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			MGC47374; 4631403P03Rik	MGC47374; 4631403P03Rik
Mus musculus	RefSeq	ILMN_209560	ILMN_209560	NRARP	NM_025980.2	NM_025980.2		67122	110815819	NM_025980.2	Nrarp	NP_080256.2	ILMN_2596979	004810328	S	2251	CCGCCTGGCCATATTCTTCGGTCTTCTGCGCTTTTATGAACCAGTGTGGG	2	+	25038528-25038577	2qA3	Mus musculus Notch-regulated ankyrin repeat protein (Nrarp), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		2700054M22Rik	2700054M22Rik
Mus musculus	MEEBO	ILMN_192211	ILMN_192211	C330006P03RIK	scl44527.2.272_210						C330006P03Rik		ILMN_2486012	002360343	S	13	TCAGGTGCTGCTGGACTTTGTGCACTTTGGAGGTACTGCATGTATCTTCC										
Mus musculus	RefSeq	ILMN_219619	ILMN_219619	PAG1	NM_053182.4	NM_053182.4		94212	146149297	NM_053182.4	Pag1	NP_444412.2	ILMN_2711339	003800152	S	3446	CACCGACTGGTTGTGGATCATGCCTGTGGAGCTGCAAACTCTCTTGGATG				3qA1	Mus musculus phosphoprotein associated with glycosphingolipid microdomains 1 (Pag1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell activation [goid 50868] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cbp; Pag; F730007C19Rik	Cbp; Pag; F730007C19Rik
Mus musculus	RefSeq	ILMN_255178	ILMN_255178	OLFR538	NM_001011867.1	NM_001011867.1		258201	58801487	NM_001011867.1	Olfr538	NP_001011867.1	ILMN_2919824	002900672	S	381	CTGTCCCCTCCACTACAGCTCTAGAATGAGCCCACAGCTGTGTGCAGCTC	7	+	147760434-147760483	7qF5	Mus musculus olfactory receptor 538 (Olfr538), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR253-10P	MOR253-10P
Mus musculus	RefSeq	ILMN_212253	ILMN_212253	PPA2	NM_146141.1	NM_146141.1		74776	22203752	NM_146141.1	Ppa2	NP_666253.1	ILMN_2773099	000580315	S	697	TACCTGGAAGCCACTCTCAATTGGTTTAGACTCTATAAGGTACCGGATGG	3	+	133030819-133030868	3qG3	Mus musculus pyrophosphatase (inorganic) 2 (Ppa2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]	MGC6539; Sid6306; 1110013G13Rik	MGC6539; Sid6306; 1110013G13Rik
Mus musculus	RefSeq	ILMN_212253	ILMN_212253	PPA2	NM_146141.1	NM_146141.1		74776	22203752	NM_146141.1	Ppa2	NP_666253.1	ILMN_2624448	001450671	S	471	AGAGATAAGAGCACCGACTGCTGTGGGGATAATGATCCCATTGACGTCTG	3	+	133002247-133002296	3qG3	Mus musculus pyrophosphatase (inorganic) 2 (Ppa2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]	MGC6539; Sid6306; 1110013G13Rik	MGC6539; Sid6306; 1110013G13Rik
Mus musculus	RefSeq	ILMN_212253	ILMN_212253	PPA2	NM_146141.1	NM_146141.1		74776	22203752	NM_146141.1	Ppa2	NP_666253.1	ILMN_2817996	005260243	S	792	GGCTTTCGCCCTCGACGTTATTAACTCTGCACATGAACGTTGGAAAGAGA	3	+	133030914-133030914:133033344-133033392	3qG3	Mus musculus pyrophosphatase (inorganic) 2 (Ppa2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]	MGC6539; Sid6306; 1110013G13Rik	MGC6539; Sid6306; 1110013G13Rik
Mus musculus	RefSeq	ILMN_212253	ILMN_212253	PPA2	NM_146141.1	NM_146141.1		74776	22203752	NM_146141.1	Ppa2	NP_666253.1	ILMN_1234589	004560220	S	456	GGAAGATCCTCACCTAAGAGATAAGAGCACCGACTGCTGTGGGGATAATG	3	+	133002232-133002281	3qG3	Mus musculus pyrophosphatase (inorganic) 2 (Ppa2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]	MGC6539; Sid6306; 1110013G13Rik	MGC6539; Sid6306; 1110013G13Rik
Mus musculus	RefSeq	ILMN_238725	ILMN_238725	OLFR298	NM_001011751.1	NM_001011751.1		257905	58801289	NM_001011751.1	Olfr298	NP_001011751.1	ILMN_3160773	006330484	S	777	GCCACCCTCAGTTGTACCATCAATTTCAGACAGGCTGTTTTCTGTGCTAC	7	-	93637233-93637282	7qD3	Mus musculus olfactory receptor 298 (Olfr298), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR219-4	MOR219-4
Mus musculus	Riken	ILMN_205894	ILMN_205894	ALDH1A3	ri|A830006C10|PX00153E12|AK043530|1201					AK043530	Aldh1a3		ILMN_1237578	006860168	S	858	GAGCTGCTGCCAGAGACAACAACTGCTCCATTATTTGAGACCCACCGACG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IGI]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina [goid 2072] [evidence IGI]; The progression of the nucleus accumbens over time from its initial formation until its mature state. The nucleus accumbens is a collection of pleomorphic cells in the caudal part of the anterior horn of the lateral ventricle, in the region of the olfactory tubercle, lying between the head of the caudate nucleus and the anterior perforated substance. It is part of the ventral striatum, a composite structure considered part of the basal ganglia [goid 21768] [evidence IMP]; The biological process whose specific outcome is the progression of the olfactory pit from an initial condition to its mature state. This process begins with the formation of the olfactory pit, which is an indentation of the olfactory placode, and ends when the pits hollows out to form the nasopharynx [goid 60166] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212596	ILMN_218323	LRRC39	NM_027321.2	NM_027321.2		109245	142371234	NM_027321.2	Lrrc39	NP_081597.1	ILMN_1230043	001470164	S	442	GCATCTCATTGTGCTAGATTTATCTCGGAACACAATTTCAGAGATCCCCC	3	+	116273015-116273064	3qG1	Mus musculus leucine rich repeat containing 39 (Lrrc39), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9430028I06Rik; 2010005E21Rik	9430028I06Rik; 2010005E21Rik
Mus musculus	RefSeq	ILMN_218323	ILMN_218323	LRRC39	NM_027321.2	NM_027321.2		109245	142371234	NM_027321.2	Lrrc39	NP_081597.1	ILMN_2694346	003780064	S	1654	CCACTGGACATGTTATCAGTAATAGTTCCTCCTCCCAGTTTGCTCTTACG	3	+	116274909-116274958	3qG1	Mus musculus leucine rich repeat containing 39 (Lrrc39), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9430028I06Rik; 2010005E21Rik	9430028I06Rik; 2010005E21Rik
Mus musculus	RefSeq	ILMN_220926	ILMN_220926	PTCH2	NM_008958.2	NM_008958.2		19207	118130615	NM_008958.2	Ptch2	NP_032984.1	ILMN_2728710	000240167	S	3456	TTTTGCCAGAGTGACTACCTCCATGACTGTGGCCCTCCACCCACCACCTC	4	+	116782379-116782428	4qD1	Mus musculus patched homolog 2 (Ptch2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]	ptc2	ptc2
Mus musculus	RefSeq	ILMN_226675	ILMN_226675	SCARF1	NM_001004157.2	NM_001004157.2		380713	87239975	NM_001004157.2	Scarf1	NP_001004157.2	ILMN_2820703	000110692	S	2537	GATGCAGGGAGAGCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTT	11	+	75333825-75333874	11qB5	Mus musculus scavenger receptor class F, member 1 (Scarf1), mRNA.		The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SREC-I; AA986099; KIAA0149; mKIAA0149; SREC; MGC90792	SREC-I; AA986099; KIAA0149; mKIAA0149; SREC; MGC90792
Mus musculus	RefSeq	ILMN_199156	ILMN_226675	SCARF1	NM_001004157.2	NM_001004157.2		380713	87239975	NM_001004157.2	Scarf1	NP_001004157.2	ILMN_2534249	006960390	S	278	AAACCTGGATTCTTCGGAGCCCAGTGCAGCTCCCGCTGTCCAGGACAGTA	11	+	75322874-75322907:75323663-75323678	11qB5	Mus musculus scavenger receptor class F, member 1 (Scarf1), mRNA.		The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SREC-I; AA986099; KIAA0149; mKIAA0149; SREC; MGC90792	SREC-I; AA986099; KIAA0149; mKIAA0149; SREC; MGC90792
Mus musculus	RefSeq	ILMN_209477	ILMN_260183	ALG8	NM_199035.1	NM_199035.1		381903	39841066	NM_199035.1	Alg8	NP_950200.1	ILMN_2765304	004210403	S	943	CCCCAGGGCCTCAATGACAAGTGGTTTGGTTCAGCAGTTCCAGCACACAG	7	+	104535346-104535395	7qE1	Mus musculus asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase) (Alg8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Gm1089; AI447372; MGC74399	Gm1089; AI447372; MGC74399
Mus musculus	RefSeq	ILMN_209477	ILMN_260183	ALG8	NM_199035.1	NM_199035.1		381903	39841066	NM_199035.1	Alg8	NP_950200.1	ILMN_1237963	003830372	S	1723	TGCCCTGCCTAGCAACCTGATTGTTTCCATGGTGAGGAGCCACTTGCCCT	7	+	104540401-104540450	7qE1	Mus musculus asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase) (Alg8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Gm1089; AI447372; MGC74399	Gm1089; AI447372; MGC74399
Mus musculus	RefSeq	ILMN_260183	ILMN_260183	ALG8	NM_199035.1	NM_199035.1		381903	39841066	NM_199035.1	Alg8	NP_950200.1	ILMN_2833587	001570523	S	1840	AAACTGCTGTGTCCACTGAGGGTGAACCGGGGGGTGGGTGAAAAGTGGCA	7	+	104540518-104540567	7qE1	Mus musculus asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase) (Alg8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Gm1089; AI447372; MGC74399	Gm1089; AI447372; MGC74399
Mus musculus	RefSeq	ILMN_209477	ILMN_260183	ALG8	NM_199035.1	NM_199035.1		381903	39841066	NM_199035.1	Alg8	NP_950200.1	ILMN_1218327	001710091	S	125	GTACACCGAAATTGGCTTGCAATCACTCACAGCCTCCCAATATCTCAGTG	7	+	104522198-104522247	7qE1	Mus musculus asparagine-linked glycosylation 8 homolog (yeast, alpha-1,3-glucosyltransferase) (Alg8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Gm1089; AI447372; MGC74399	Gm1089; AI447372; MGC74399
Mus musculus	RefSeq	ILMN_199977	ILMN_199977	LOC381610	XM_355566.1	XM_355566.1			38079492	XM_355566.1	LOC381610		ILMN_1230771	002510762	S	328	GGTGAGTGTGGCATCCCTCATTCTCAGAAACAAGCCAGATCCTCTGTGGA										
Mus musculus	RefSeq	ILMN_209356	ILMN_209356	CLDN10	NM_023878.1	NM_023878.1		58187	21617848	NM_023878.1	Cldn10	NP_076367.1	ILMN_2610656	005890709	S	299	GTGCTCTCGTCGCTGCCACCACATCCAACGAATGGAAAGTGACCACCCGA	14	-	117788268-117788317	14qE4	Mus musculus claudin 10 (Cldn10), transcript variant 1, mRNA.				D14Ertd728e; 6720456I16Rik	D14Ertd728e; 6720456I16Rik
Mus musculus	Riken	ILMN_206965	ILMN_206965	E230013N04RIK	ri|E230013N04|PX00210I14|AK087579|3262					AK087579	E230013N04Rik		ILMN_1219532	000830070	S	3085	TCGCTGTGAGGTAACCACCCGCCTGTTAGGACTTAGGAAGGAAGAGGTGC										
Mus musculus	Riken	ILMN_205010	ILMN_205010	PTPRE	ri|9830133I11|PX00118A08|AK036557|3374					AK036557	Ptpre		ILMN_1243982	005310671	S	3229	CCTCAGGAGTGGAATGCTCGTCACTACTTTGTATGGCTACAGAGATGGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211725	ILMN_211725	1700019N19RIK	NM_026208.2	NM_026208.2		67507	142372226	NM_026208.2	1700019N19Rik	NP_080484.1	ILMN_2618910	002570477	S	813	CCTCTTTGGGCAATGAGGTGATTTAATAAGAATTCCTTAACTGCTGCCCC	19	-	58860353-58860402	19qD2	Mus musculus RIKEN cDNA 1700019N19 gene (1700019N19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221898	ILMN_221898	SLC24A5	NM_175034.3	NM_175034.3		317750	110681723	NM_175034.3	Slc24a5	NP_778199.2	ILMN_1236734	006130242	S	1580	GTGGAAAGATGGAATGGTAGAGGGGCAAAAAGAAGAAAATTCATGTCTTC	2	+	124914042-124914091	2qF1	Mus musculus solute carrier family 24, member 5 (Slc24a5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	F630045L20Rik; NCX5; JSX	F630045L20Rik; NCX5; JSX
Mus musculus	RefSeq	ILMN_203850	ILMN_321913	LOC100041681	XM_001477075.1	XM_001477075.1		100041681	149255156	XM_001477075.1	LOC100041681	XP_001477125.1	ILMN_1252371	007510255	S	166	GTGTTGGCCCTGCTCTTTATGTGGTGTGTTTGGCGTTTGATGGGCGCTCC	6	+	50209543-50209592	6qB2.3	PREDICTED: Mus musculus hypothetical protein LOC100041681 (LOC100041681), mRNA.					
Mus musculus	MEEBO	ILMN_186775	ILMN_186775	SCL0003476.1_2802	scl0003476.1_2802	AK050725.1			26094076	AK050725.1	scl0003476.1_2802		ILMN_2438404	001980133	S	17	GCCCTTGTATTAGCCTAAGTTCAAAACAGCATGCTGCCCACTGTACTAGG										
Mus musculus	RefSeq	ILMN_211848	ILMN_228304	PEO1	NM_153796.3	NM_153796.3		226153	48976074	NM_153796.3	Peo1	NP_722491.2	ILMN_2620089	004070343	S	2865	CGTTTTGGTGAAAGGAACGAAGCAAAGGGAAGGATGCTAGACTCAGCTCG	19	+	45086629-45086678	19qC3	Mus musculus progressive external ophthalmoplegia 1 (human) (Peo1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IDA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence ISA]	PEO; D19Ertd626e; MGC41750; Twinl	PEO; D19Ertd626e; MGC41750; Twinl
Mus musculus	RefSeq	ILMN_228304	ILMN_228304	PEO1	NM_153796.3	NM_153796.3		226153	48976074	NM_153796.3	Peo1	NP_722491.2	ILMN_2913845	000010338	S	3133	GAAACACGCCAGACCCTCAGGTGGGAATGAGCAAGGCAGATGAAGAGGCC	19	+	45086897-45086946	19qC3	Mus musculus progressive external ophthalmoplegia 1 (human) (Peo1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IDA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence ISA]	PEO; D19Ertd626e; MGC41750; Twinl	PEO; D19Ertd626e; MGC41750; Twinl
Mus musculus	RefSeq	ILMN_211848	ILMN_228304	PEO1	NM_153796.3	NM_153796.3		226153	48976074	NM_153796.3	Peo1	NP_722491.2	ILMN_1243077	006650008	S	2336	GATCTTACAGGATAGGAAACTGGTGACTGGGCCTGGGAAACGGTATCTGC	19	+	45086100-45086149	19qC3	Mus musculus progressive external ophthalmoplegia 1 (human) (Peo1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IDA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence ISA]	PEO; D19Ertd626e; MGC41750; Twinl	PEO; D19Ertd626e; MGC41750; Twinl
Mus musculus	RefSeq	ILMN_196135	ILMN_230833	LENG8	NM_172736.3	NM_172736.3		232798	118129982	NM_172736.3	Leng8	NP_766324.1	ILMN_2655888	004290333	S	3407	GAGAGGGTCCTCAAAATTAGCGGTACATGTACACTATTAGGGCATCTGAG	7	+	4098088-4098137	7qA1	Mus musculus leukocyte receptor cluster (LRC) member 8 (Leng8), mRNA.				AW049671	AW049671
Mus musculus	RefSeq	ILMN_196135	ILMN_230833	LENG8	NM_172736.3	NM_172736.3		232798	118129982	NM_172736.3	Leng8	NP_766324.1	ILMN_1258147	004070373	S	4728	CCCTCCTGCCTCTTCCCTTCCCACTCCCTGGTTCAACACAGGTAAAATGG	7	+	4099409-4099458	7qA1	Mus musculus leukocyte receptor cluster (LRC) member 8 (Leng8), mRNA.				AW049671	AW049671
Mus musculus	Riken	ILMN_207281	ILMN_207281	ELAVL3	ri|G630034I07|PL00013K09|AK090281|3043					AK090281	Elavl3		ILMN_1244235	007380332	S	2993	TGAGCTTGTGATTCTCCTGCCTCAGCCTCCTAATGACAAACCTGTACCAC							The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	Riken	ILMN_206908	ILMN_206908	E430035N09RIK	ri|E430035N09|PX00100F18|AK089018|2293					AK089018	E430035N09Rik		ILMN_1235756	004010494	S	1848	ATTCCTAGCCCAGAGGTAGTAGTGCATGCCTGTACTCCCAGCACGCAGGG										
Mus musculus	RefSeq	ILMN_234721	ILMN_234721	OLFR915	NM_146785.1	NM_146785.1		258781	22129278	NM_146785.1	Olfr915	NP_666996.1	ILMN_2829495	003190682	S	540	CATCCACCCTTTGCTTCAGCTCTCCTGCACCAGCATCTATGTCAACGAGC	9	-	38454518-38454567	9qA5.1	Mus musculus olfactory receptor 915 (Olfr915), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR167-4	MOR167-4
Mus musculus	RefSeq	ILMN_213069	ILMN_213069	LPIN3	NM_022883.2	NM_022883.2		64899	118130395	NM_022883.2	Lpin3	NP_075021.1	ILMN_2633215	004560092	S	2823	CCGGGTCTCCTTGGTCTGACCCAGGACTGATGGAGTACTTAGGACAGTCA	2	+	160731149-160731198	2qH2	Mus musculus lipin 3 (Lpin3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]	AA438110; 9130206L11Rik; mKIAA4023; AV236139; MGC143991; MGC143992; KIAA4023	AA438110; 9130206L11Rik; mKIAA4023; AV236139; MGC143991; MGC143992; KIAA4023
Mus musculus	Riken	ILMN_202495	ILMN_202495	ARAF	ri|2310066D16|ZX00040N09|AK010060|1264					AK010060	Araf		ILMN_1256033	000050471	S	914	AATGTATTATTATTTGTAGTTATGAGTGTATGTGTGTTGATTTACCTGTG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA];  [goid 5057] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200673	ILMN_200673	LOC384459	XM_357658.1	XM_357658.1			38085052	XM_357658.1	LOC384459		ILMN_1258721	001660068	S	5	CTGCAGATGCCGAAGCATCAGCGAGAGACACTGGAGAGATCTCAGAGGGC										
Mus musculus	Riken	ILMN_201907	ILMN_201907	4933425L03RIK	ri|4933425L03|PX00020N03|AK016918|1968					AK016918	4933425L03Rik		ILMN_1245268	002230524	S	1604	GCCACAGCTGCTACTCTCTGGAACATGCAACAGAAACTCAACCACTTCCA										
Mus musculus	MEEBO	ILMN_209729	ILMN_209729	4930552P12RIK	scl52349.4.1_154				51771629	XM_488878	4930552P12Rik		ILMN_2598611	000730470	S	2342	GTTTGGAAAGCCGCTCCCACCTGGTCCAACTCTCTCTTAGCTCAACCAGT										
Mus musculus	RefSeq	ILMN_185142	ILMN_185142	WDR41	NM_172590.2	NM_172590.2		218460	123702000	NM_172590.2	Wdr41	NP_766178.2	ILMN_3079949	003940692	I	23	GTGCTCACTGGGGACGCGGAACCTCCGCCTCCGCCGTCGCGGCCTTCAGT	13	+	95746325-95746374	13qD1	Mus musculus WD repeat domain 41 (Wdr41), mRNA.				B830029I03Rik; MSTP048	B830029I03Rik; MSTP048
Mus musculus	RefSeq	ILMN_185142	ILMN_185142	WDR41	NM_172590.2	NM_172590.2		218460	123702000	NM_172590.2	Wdr41	NP_766178.2	ILMN_2523102	002850736	S	1320	AAACAGGCCAGCCAGCCTGTTAAAAAGCAGGAAGAAAACGTTACCACGTG	13	+	95788822-95788871	13qD1	Mus musculus WD repeat domain 41 (Wdr41), mRNA.				B830029I03Rik; MSTP048	B830029I03Rik; MSTP048
Mus musculus	Riken	ILMN_204873	ILMN_204873	A130099L09RIK	ri|A130099L09|PX00126D10|AK038374|2325					AK038374	A130099L09Rik		ILMN_2568269	006860333	S	1829	CTCTGACAGTTATCAAGCGGGCAGATGAATTGTCCTACCAAGCTTGAGAG										
Mus musculus	Riken	ILMN_201712	ILMN_201712	2310014B11RIK	ri|2310014B11|ZX00039O07|AK009331|1008					AK009331	2310014B11Rik		ILMN_1227110	000870240	S	864	CTGCAGCGCCTGCCTCGGCTGTAGGCCTCTTTCCACCTGGTTCTTTAGAA										
Mus musculus	RefSeq	ILMN_217713	ILMN_217713	ABCA8A	NM_153145.3	NM_153145.3		217258	145279212	NM_153145.3	Abca8a	NP_694785.2	ILMN_2686700	006560594	S	4880	TTTACCTATGGCTGGTTTCTACTCTCTAGTGGCTCAAAGCAATTTTGTCT				11qE1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 8a (Abca8a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186267	ILMN_186267	A930009H06RIK	scl15004.1.1_160						A930009H06Rik		ILMN_2434072	005390201	S	10	CAGGATTTGCCGATTCTCCTTGCTGCTCACAGGCGACCCCTTACGTTTCC										
Mus musculus	RefSeq	ILMN_211759	ILMN_211759	SNX14	NM_172926.2	NM_172926.2		244962	142379980	NM_172926.2	Snx14	NP_766514.1	ILMN_2619249	001740577	S	612	GATGAGCTGAGGATCACCTTACGGTTTTTTGCATCTGTCTTGGTGCGAAG	9	-	88308328-88308377	9qE3.1	Mus musculus sorting nexin 14 (Snx14), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	YR-14; C330035N22Rik; B830022K16	YR-14; C330035N22Rik; B830022K16
Mus musculus	RefSeq	ILMN_211759	ILMN_211759	SNX14	NM_172926.2	NM_172926.2		244962	142379980	NM_172926.2	Snx14	NP_766514.1	ILMN_2684985	007160348	S	690	ATAACCAAGAAACTATTAAAAGCAGCAATGAAACATATAGAAGTGATTGT	9	-	88305412-88305461	9qE3.1	Mus musculus sorting nexin 14 (Snx14), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	YR-14; C330035N22Rik; B830022K16	YR-14; C330035N22Rik; B830022K16
Mus musculus	RefSeq	ILMN_211759	ILMN_211759	SNX14	NM_172926.2	NM_172926.2		244962	142379980	NM_172926.2	Snx14	NP_766514.1	ILMN_1236312	004150474	S	2768	CGGTGAAGAAACCAAGTACGAAAGCATCAGACTCCTGTTTGATGGCCTGC	9	-	88275030-88275079	9qE3.1	Mus musculus sorting nexin 14 (Snx14), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	YR-14; C330035N22Rik; B830022K16	YR-14; C330035N22Rik; B830022K16
Mus musculus	MEEBO	ILMN_223896	ILMN_223896	RNPEP	scl16258.13.1_64				21703831	NM_145417	Rnpep		ILMN_1246024	007050307	S	2046	TCCTGAAGAACTGCTCCTTCCCAAATTCATGTTCTCACTCCAGTGCCCCG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196851	ILMN_196851	LOC213819	XM_145139.1	XM_145139.1			20915213	XM_145139.1	LOC213819		ILMN_1234211	002600192	S	471	TGGTTCTTACTCTGCAGTATCCAAGGCACAGATTAAGGTGACAGATGGAC										
Mus musculus	RefSeq	ILMN_194102	ILMN_194102	TRAM2	NM_133252.2	NM_133252.2		170829	118131006	NM_133252.2	Tram2	NP_573515.1	ILMN_2503393	004210193	S	1149	CGGAGTGGTGAAGGCAGAGAACGGGACCTCCTCACGGACTAAGAAACTCA	1	-	20991653-20991702	1qA4	Mus musculus translocating chain-associating membrane protein 2 (Tram2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		MGC25725; C330003D03Rik	MGC25725; C330003D03Rik
Mus musculus	RefSeq	ILMN_194102	ILMN_194102	TRAM2	NM_133252.2	NM_133252.2		170829	118131006	NM_133252.2	Tram2	NP_573515.1	ILMN_3109653	005220377	A	1138	TACCATGAAAACGGAGTGGTGAAGGCAGAGAACGGGACCTCCTCACGGAC	1	-	20991664-20991713	1qA4	Mus musculus translocating chain-associating membrane protein 2 (Tram2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		MGC25725; C330003D03Rik	MGC25725; C330003D03Rik
Mus musculus	Riken	ILMN_206977	ILMN_206977	4933401J08RIK	ri|4933401J08|PX00641J24|AK077079|1112					AK077079	4933401J08Rik		ILMN_1249436	002970192	S	980	GCCTCTGTCGTGGGGTCCACAAAGCATTTGAACAGGGGCTTCTTCCCAGG										
Mus musculus	RefSeq	ILMN_201186	ILMN_201186	LOC384909	XM_357936.1	XM_357936.1			38089688	XM_357936.1	LOC384909		ILMN_1217268	000630136	S	158	ACATCCTTGTGAGCATTGTGGCTGGAACAGACGAACAGACCCAAATGGCC										
Mus musculus	RefSeq	ILMN_198375	ILMN_198375	LOC211095	XM_140313.3	XM_140313.3			38084693	XM_140313.3	LOC211095		ILMN_2531464	003940035	S	581	AGAAGATGTTGCATCAGAAGGATCAAGCAGCTGCCTTGTCCAAGAGCAAG										
Mus musculus	Riken	ILMN_205831	ILMN_205831	A530064K17RIK	ri|A530064K17|PX00142K22|AK041032|2180					AK041032	A530064K17Rik		ILMN_1217802	004010193	S	1794	CAGGAAGGACAGGCTCCAGTCAGATATAGCAAGGGCAAGTAGCACTAGGT										
Mus musculus	Riken	ILMN_207044	ILMN_207044	TSC1	ri|6330568O18|PX00044I03|AK078140|3641					AK078140	Tsc1		ILMN_2584614	005900719	S	3388	AGACTGACGCAGCTCCAGAAGGGAGCCCACTGAGGAGAGGGGACTAACTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IGI]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IGI]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]	Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [evidence IPI]		
Mus musculus	Riken	ILMN_205500	ILMN_205500	D130039D18RIK	ri|D130039D18|PX00184A04|AK051355|1756					AK051355	D130039D18Rik		ILMN_2573027	002350427	S	1241	TAGTGACGGAGTGACCAAAGGTAGAGACAGGTTCATTCCTAGAGCTGGCC										
Mus musculus	MEEBO	ILMN_190841	ILMN_190841	IGFBP5	scl016011.3_113				6754311	NM_010518	Igfbp5		ILMN_2682613	004590414	S	3322	CCCCGATGTGGAAGAGCTCGGCTCCTCTTTAGCATTTTGGTACTTAAGGA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A complex of proteins which includes the insulin-like growth factor (IGF) and a number of IGF-binding proteins. The complex plays a role in growth and development [goid 16942] [evidence IC ]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217407	ILMN_217407	SLC22A13	NM_133980.1	NM_133980.1		102570	19527199	NM_133980.1	Slc22a13	NP_598741.1	ILMN_3126190	006110315	A	975	AGAAGACAGGCCCCTCGGGGAACGCCTTGGACCTTTTCAGACACCCTCAC	9	-	119043866-119043915	9qF3	Mus musculus solute carrier family 22 (organic cation transporter), member 13 (Slc22a13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	OCTL1; ORCTL3; OCTL3; AI648912	OCTL1; ORCTL3; OCTL3; AI648912
Mus musculus	RefSeq	ILMN_217407	ILMN_217407	SLC22A13	NM_133980.1	NM_133980.1		102570	19527199	NM_133980.1	Slc22a13	NP_598741.1	ILMN_3050107	007330025	I	1061	TTTGTGGACAGTCTGGTGTACTACAGCCTCAGCTTCCAAGTGGGGGACTT	9	-	119043561-119043610	9qF3	Mus musculus solute carrier family 22 (organic cation transporter), member 13 (Slc22a13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	OCTL1; ORCTL3; OCTL3; AI648912	OCTL1; ORCTL3; OCTL3; AI648912
Mus musculus	RefSeq	ILMN_210790	ILMN_210790	OLFR62	NM_146315.1	NM_146315.1		18363	22203768	NM_146315.1	Olfr62	NP_666427.1	ILMN_2609212	001470382	S	677	CTGCTATCTTGAGAATCCGTTCAACTCAAGGGAGGATCAAGGCCTTCTCC	4	+	118338800-118338849	4qD2.1	Mus musculus olfactory receptor 62 (Olfr62), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129225; IH12; H12; MOR258-5	MGC129225; IH12; H12; MOR258-5
Mus musculus	RefSeq	ILMN_233272	ILMN_233272	BXDC1	NM_023323.3	NM_023323.3		67239	110347518	NM_023323.3	Bxdc1	NP_075812.3	ILMN_3153421	001570184	A	1374	CCTCAGTGTGTCAGACTCCTACTATGGGAAGTGCCTTTATCCACTGAACC	10	-	39943108-39943157	10qB1	Mus musculus brix domain containing 1 (Bxdc1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AU040229; AU043242; 2810470K21Rik	AU040229; AU043242; 2810470K21Rik
Mus musculus	MEEBO	ILMN_223942	ILMN_223942	3300001G02RIK	scl41729.5.1_4				21313435	NM_030093	3300001G02Rik		ILMN_2771908	000620619	S	533	CGGAACCGAGATGAGGTTTCCTTTATCAAGAAGCTTAGGCAAAAGTGAAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_221552	ILMN_221552	UTP23	NM_030132.4	NM_030132.4		78581	142350834	NM_030132.4	Utp23	NP_084408.1	ILMN_2737092	003840326	S	2117	CAATGCTACCGTCTGCTCTCAATAGCCTGGAAAGGATGGCTATAGCACCT	15	+	51715437-51715486	15qC	Mus musculus UTP23, small subunit (SSU) processome component, homolog (yeast) (Utp23), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		1700010I21Rik; BB238373; AI662478	1700010I21Rik; BB238373; AI662478
Mus musculus	RefSeq	ILMN_184723	ILMN_261556	CBLB	NM_001033238.1	NM_001033238.1		208650	118344447	NM_001033238.1	Cblb	NP_001028410.1	ILMN_2701379	001980707	S	5978	CCTTAGTTTGCACTGAATTGTCTCATCTGGTTTTAAAATGTCTCAAATGG	16	+	52207815-52207864	16qB5	Mus musculus Casitas B-lineage lymphoma b (Cblb), mRNA. XM_001003462 XM_001003472 XM_001003476 XM_001003639 XM_001003649 XM_156257 XM_902056 XM_902058 XM_917535 XM_924994 XM_924996	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI851073; AI429560; Cbl-b	AI851073; AI429560; Cbl-b
Mus musculus	RefSeq	ILMN_184723	ILMN_261556	CBLB	NM_001033238.1	NM_001033238.1		208650	118344447	NM_001033238.1	Cblb	NP_001028410.1	ILMN_2702039	004070133	S	6072	GGTACTTTCTGTAAGCCTGAAATGTTGAGCTTCGAAGGAGACTTTCTGGA	16	+	52207909-52207958	16qB5	Mus musculus Casitas B-lineage lymphoma b (Cblb), mRNA. XM_001003462 XM_001003472 XM_001003476 XM_001003639 XM_001003649 XM_156257 XM_902056 XM_902058 XM_917535 XM_924994 XM_924996	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI851073; AI429560; Cbl-b	AI851073; AI429560; Cbl-b
Mus musculus	RefSeq	ILMN_219252	ILMN_241704	1700084J12RIK	XR_001566.1	XR_001566.1		73486	94398516	XR_001566.1	1700084J12Rik		ILMN_2706248	004890066	S	826	TGTTGTTTAAAATTATCAAGTATCTTCAAAAAGATGATTTTCTGTCTTCA				15qB3.1	PREDICTED: Mus musculus RIKEN cDNA 1700084J12 gene (1700084J12Rik), misc RNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215163	ILMN_215163	OTC	NM_008769.2	NM_008769.2		18416	31560664	NM_008769.2	Otc	NP_032795.1	ILMN_2797725	004890731	S	1999	TCATTTGCCGTTTTCTCATCACAATTTGAATAGATCTCCTTTGTGGGTGA	X	+	9477717-9477766	XqA1.1	Mus musculus ornithine transcarbamylase (Otc), mRNA.	An enzyme complex that catalyzes the transfer of a carbamoyl to ornithine, forming citrulline [goid 9348] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6526] [evidence IEA]; A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a carboxyl- or carbamoyl group from one compound (donor) to another (acceptor) [goid 16743] [evidence IEA]; Catalysis of the reaction: carbamoyl phosphate + L-ornithine = phosphate + L-citrulline [goid 4585] [evidence IEA]; Interacting selectively with an amino acid, organic acids containing one or more amino substituents [goid 16597] [evidence IEA]	Sf; spf; AI265390	Sf; spf; AI265390
Mus musculus	MEEBO	ILMN_189100	ILMN_189100	9430088N01RIK	scl37325.1.1213_80						9430088N01Rik		ILMN_1251471	002140129	S	1	CATAATCTGGTGGCAGCTGTGAGCCTCCCTTGAGGACTTCCCACACACCT										
Mus musculus	MEEBO	ILMN_214784	ILMN_214784	HIRA	scl0015260.1_245	NM_010435.1			6754201	NM_010435.1	Hira		ILMN_1239277	005290431	S	1495	GAATGCCACTACTAGGGAGACAAGCTCAGCATCCTCAGTCACGGGTGTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_201678	ILMN_201678	1810027L02RIK	ri|1810027L02|R000023M23|AK007620|480					AK007620	1810027L02Rik		ILMN_2543711	006200474	S	331	AGGGGTGAAGTTAAAGAAGAAAAATAAATAGTGTGGGGTGTGGTTTGGGT										
Mus musculus	RefSeq	ILMN_215797	ILMN_322704	WDR73	XM_001479473.1	XM_001479473.1		71968	149257456	XM_001479473.1	Wdr73	XP_001479523.1	ILMN_1223780	007510162	S	1514	GTGAACTTTCTCACAGAAGGAATCGATGTCTCAGGGCCAATAAACATCAA				7qD3	PREDICTED: Mus musculus WD repeat domain 73 (Wdr73), mRNA.					
Mus musculus	MEEBO	ILMN_191431	ILMN_191431	ZBTB10	scl00229055.1_85				51707545	XM_485202	Zbtb10		ILMN_1252092	006130152	S	1	GGGCAGCTGGGCAGTAAATTTGGAATACACTAGCTATTGAGAACAAAATT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_204363	ILMN_204363	C430016E07RIK	ri|C430016E07|PX00078L17|AK049482|1499					AK049482	C430016E07Rik		ILMN_2564399	006130500	S	1100	TTGGCTCGCACCGAGTTCCGGCTAGGATCTGTCCACGTTCTGCAAGCGGC										
Mus musculus	RefSeq	ILMN_219240	ILMN_219240	PNLIP	NM_026925.3	NM_026925.3		69060	42476138	NM_026925.3	Pnlip	NP_081201.2	ILMN_1224275	000870349	S	1295	GTGATCAACCCAACTCTACCCAAAGTGGGAGCATCAAGGATCACAGTGGA	19	+	58755327-58755376	19qD2	Mus musculus pancreatic lipase (Pnlip), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; Uptake of cholesterol into the blood by absorption from the small intestine [goid 30299] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC74173; PTL; 1810007A24Rik	MGC74173; PTL; 1810007A24Rik
Mus musculus	RefSeq	ILMN_213259	ILMN_213259	OLFR161	NM_146860.1	NM_146860.1		258859	33239305	NM_146860.1	Olfr161	NP_667071.1	ILMN_1238823	007610026	S	597	GATTCTTGCTGTTGCAGGGCTGATAATGTTAGCTCCATTTGTTTGCATCC	16	+	3592994-3593043	16qA1	Mus musculus olfactory receptor 161 (Olfr161), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR131-1; OR912-47M6	MOR131-1; OR912-47M6
Mus musculus	RefSeq	ILMN_211426	ILMN_211426	OLFR1022	NM_146589.1	NM_146589.1		258582	22129468	NM_146589.1	Olfr1022	NP_666800.1	ILMN_1257841	003370754	S	591	GGCCATGTTTGTTGTTGCTGGATTCACTCTAATAAGTTCTCTCTCTATCA	2	+	85709341-85709390	2qD	Mus musculus olfactory receptor 1022 (Olfr1022), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR196-1	MOR196-1
Mus musculus	RefSeq	ILMN_216675	ILMN_216675	OLFR571	NM_147085.1	NM_147085.1		259089	22128800	NM_147085.1	Olfr571	NP_667296.1	ILMN_1247936	002350025	S	800	TCATTGACAGATTCAAGCTGCCACTCCCTCCGCCTGCTCACACGCTCCTC	7	-	110057502-110057551	7qE3	Mus musculus olfactory receptor 571 (Olfr571), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR21-1	MOR21-1
Mus musculus	RefSeq	ILMN_205643	ILMN_239213	MFSD7B	NM_001081259.1	NM_001081259.1		226844	124486924	NM_001081259.1	Mfsd7b	NP_001074728.1	ILMN_1222512	004540603	S	3829	CATCACCTGTGTCTGCCTTCATCAGATGGTTTCAGAAGCTGTTGCATCTG	1	-	192829919-192829968	1qH6	Mus musculus major facilitator superfamily domain containing 7B (Mfsd7b), mRNA.				FLVCR	FLVCR
Mus musculus	RefSeq	ILMN_201016	ILMN_228895	LOC665918	XM_980351.1	XM_980351.1		665918	94409779	XM_980351.1	LOC665918	XP_985445.1	ILMN_1242126	006840669	S	495	TGAGGGATGTCCACCTTGCCAGAGCCCTGGTTGGCAGAGCGGTACAACAA	Y|NT_161924.3	+	449584-449633		PREDICTED: Mus musculus similar to spermiogenesis specific transcript on the Y 1 (LOC665918), mRNA.					
Mus musculus	RefSeq	ILMN_211639	ILMN_211639	SIAH1B	NM_009173.1	NM_009173.1		20438	6677948	NM_009173.1	Siah1b	NP_033199.1	ILMN_2903734	003190376	S	1492	ACAATTTTTCGGGGTGGGGGTGTGCCTGCACACATGCGTGCACGTGTGTG	X	-	160508806-160508855	XqF5	Mus musculus seven in absentia 1B (Siah1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA960570; Sinh1b	AA960570; Sinh1b
Mus musculus	RefSeq	ILMN_211639	ILMN_211639	SIAH1B	NM_009173.1	NM_009173.1		20438	6677948	NM_009173.1	Siah1b	NP_033199.1	ILMN_2646574	006620474	S	309	CAGGGTACGCTCTCCATCCACAGAGATGAGCCGTCAGGCTGCTACAGCAT	X	-	160509989-160510014:160510015-160510038	XqF5	Mus musculus seven in absentia 1B (Siah1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA960570; Sinh1b	AA960570; Sinh1b
Mus musculus	RefSeq	ILMN_211639	ILMN_211639	SIAH1B	NM_009173.1	NM_009173.1		20438	6677948	NM_009173.1	Siah1b	NP_033199.1	ILMN_2618014	000630170	S	1507	GGGGGTGTGCCTGCACACATGCGTGCACGTGTGTGCTTGGTTTTCCTTTA	X	-	160508791-160508840	XqF5	Mus musculus seven in absentia 1B (Siah1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA960570; Sinh1b	AA960570; Sinh1b
Mus musculus	RefSeq	ILMN_211639	ILMN_211639	SIAH1B	NM_009173.1	NM_009173.1		20438	6677948	NM_009173.1	Siah1b	NP_033199.1	ILMN_1217391	006130364	S	132	AGACCAGGTGTACACTCAAGACCTAGAATGACCAAGAATGTGGAACCTTA	X	-	160511228-160511277	XqF5	Mus musculus seven in absentia 1B (Siah1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA960570; Sinh1b	AA960570; Sinh1b
Mus musculus	RefSeq	ILMN_211639	ILMN_211639	SIAH1B	NM_009173.1	NM_009173.1		20438	6677948	NM_009173.1	Siah1b	NP_033199.1	ILMN_2706393	004220259	S	55	CAAAATAGTGCCTGGGATCCGGATGACAGCAGGCATTAAGGGCTGGCTAC	X	-	160513532-160513581	XqF5	Mus musculus seven in absentia 1B (Siah1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA960570; Sinh1b	AA960570; Sinh1b
Mus musculus	RefSeq	ILMN_208621	ILMN_244752	EG630499	NM_001081015.1	NM_001081015.1		630499	124486607	NM_001081015.1	EG630499	NP_001074484.1	ILMN_2588130	000010167	S	790	CAGAAGTGGGCAGCTGTGGTGGTGCCTCTTGGGAAGGAGCAGAATTACAC	17	-	34115008-34115057	17qB1	Mus musculus predicted gene, EG630499 (EG630499), mRNA.					
Mus musculus	RefSeq	ILMN_244752	ILMN_244752	EG630499	NM_001081015.1	NM_001081015.1		630499	124486607	NM_001081015.1	EG630499	NP_001074484.1	ILMN_2810539	004640348	S	525	AAGAGAGAGGGCCTACCTGGAGGGCGCGTGCATGGAGTCGCTCCGCAGAT	17	-	34115292-34115341	17qB1	Mus musculus predicted gene, EG630499 (EG630499), mRNA.					
Mus musculus	MEEBO	ILMN_210822	ILMN_210822	PYGO2	scl068911.1_313	XM_130932.5			38077578	XM_130932.5	Pygo2		ILMN_2609568	004250240	S	3056	AGAAAGTGGGTTGGCAGGGATGTGGTTACAGGATCTTTTTGTACGGTTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	MEEBO	ILMN_208696	ILMN_208696	BC005682	scl0001335.1_10	NM_033562.2			31542817	NM_033562.2	BC005682		ILMN_2685124	000610056	S	957	ATAACCTCTTGGAGCCAAAAACTGGAGACCCAGGCACCCTGCCTGTGCCG										
Mus musculus	RefSeq	ILMN_198134	ILMN_198134	LOC214900	XM_148779.2	XM_148779.2			38082097	XM_148779.2	LOC214900		ILMN_2530607	002070139	S	807	AGGACTTCAGCTGGCTGGGGACCAGTGCATGAGGAGGGTACATCACCTCT										
Mus musculus	RefSeq	ILMN_233339	ILMN_233339	SNX21	NM_133924.2	NM_133924.2		101113	110625873	NM_133924.2	Snx21	NP_598685.2	ILMN_2807449	006940608	S	1317	GGATAACACCAGGAGGAAGTCTTGGCATGGGCTCTTCAGCCTACCACAGC				2qH3	Mus musculus sorting nexin family member 21 (Snx21), mRNA.				5730407K14Rik; AI481716	5730407K14Rik; AI481716
Mus musculus	RefSeq	ILMN_216971	ILMN_216971	CFC1	NM_007685.2	NM_007685.2		12627	142366288	NM_007685.2	Cfc1	NP_031711.1	ILMN_2677580	001300435	S	983	CAGATTCACTGGAATATGCTGGATTCTCATGCTGTACAATAAAGAGGCTT	1	+	34601101-34601150	1qB	Mus musculus cripto, FRL-1, cryptic family 1 (Cfc1), mRNA.		A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IGI]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]		AV265756; cryptic	AV265756; cryptic
Mus musculus	Riken	ILMN_203091	ILMN_203091	MAPK9	ri|A730063C17|PX00152M12|AK043169|1243					AK043169	Mapk9		ILMN_2554666	007200092	S	722	CCTGGGCATGGGCTACAAAGAGAATGGTAAGTACAGTTAGGACTCCAGAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209650	ILMN_209650	CEACAM2	NM_007543.3	NM_007543.3		26367	141802842	NM_007543.3	Ceacam2	NP_031569.1	ILMN_1239472	001570367	S	2777	GCCTGTCAAGCAAAGGTTGTATTGGATATCAAGTGTTTGGTCTCACGCCA	7	-	26301251-26301300	7qA3	Mus musculus CEA-related cell adhesion molecule 2 (Ceacam2), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI267129; Bgp2	AI267129; Bgp2
Mus musculus	RefSeq	ILMN_209650	ILMN_209650	CEACAM2	NM_007543.3	NM_007543.3		26367	141802842	NM_007543.3	Ceacam2	NP_031569.1	ILMN_2597854	004060390	S	747	GATGTCCCCATTGCTGTAATCATAACTGGAGCTGTGGCCGGGGTGATTCT	7	-	26305877-26305926	7qA3	Mus musculus CEA-related cell adhesion molecule 2 (Ceacam2), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI267129; Bgp2	AI267129; Bgp2
Mus musculus	Riken	ILMN_207076	ILMN_207076	B930072B04RIK	ri|B930072B04|PX00665E16|AK081033|1928					AK081033	B930072B04Rik		ILMN_1220346	006040440	S	1578	ATGCCCCTCGTGCCGGTTGGGCTGCCCTGTTGTTTGTGAAGCTGAATGTC										
Mus musculus	RefSeq	ILMN_222082	ILMN_222082	ATP5J2	NM_020582.2	NM_020582.2		57423	142372981	NM_020582.2	Atp5j2	NP_065607.1	ILMN_1213914	000610681	S	229	ACGTTCGGAAAGGCAGCATCTCGGGGATTAGCATGGTCCTGGCAGCCTAC	5	-	145945437-145945486	5qG2	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 2 (Atp5j2), nuclear gene encoding mitochondrial protein, mRNA.	All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]	1110019H14Rik	1110019H14Rik
Mus musculus	RefSeq	ILMN_210144	ILMN_251321	4933402E13RIK	XM_889482.3	XM_889482.3		74437	149271659	XM_889482.3	4933402E13Rik	XP_894575.1	ILMN_1245909	005260364	S	1537	GCGTGGTTTGTCGAGCGCTGATCACTGGTTTCTCTTATCCAGTGTGAGGG	X	+	59544820-59544840:59544841-59544869	XqA6	PREDICTED: Mus musculus RIKEN cDNA 4933402E13 gene, transcript variant 2 (4933402E13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210144	ILMN_251321	4933402E13RIK	XM_889482.3	XM_889482.3		74437	149271659	XM_889482.3	4933402E13Rik	XP_894575.1	ILMN_1238634	003130739	S	1288	CTCACCATACATCTAGTGCAGCAAAATTACCTGGAGTATCGGGAGGTGCC	X	+	59544571-59544620	XqA6	PREDICTED: Mus musculus RIKEN cDNA 4933402E13 gene, transcript variant 2 (4933402E13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215972	ILMN_215972	DHX36	NM_028136.1	NM_028136.1		72162	30794389	NM_028136.1	Dhx36	NP_082412.1	ILMN_2665870	004060047	S	3128	GGCAAAATGCCAAGCCCTGGGTTATGACTTGCTTTTGTGTGTAAGTTAGA	3	-	62274361-62274410	3qE1	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 36 (Dhx36), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	2810407E23Rik; AI452301; Ddx36; mKIAA1488; AU022184	2810407E23Rik; AI452301; Ddx36; mKIAA1488; AU022184
Mus musculus	RefSeq	ILMN_219269	ILMN_219269	FABP2	NM_007980.2	NM_007980.2		14079	31982371	NM_007980.2	Fabp2	NP_032006.1	ILMN_2706493	007050326	S	535	TTGTCAAAGCTAAAGAAGTAAAAGCTAATTAAAAGAACTTCATTTGTTTT	3	+	122602314-122602363	3qG1	Mus musculus fatty acid binding protein 2, intestinal (Fabp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Fabpi; I-FABP	Fabpi; I-FABP
Mus musculus	RefSeq	ILMN_219877	ILMN_219877	CYP2G1	NM_013809.1	NM_013809.1		13108	7304990	NM_013809.1	Cyp2g1	NP_038837.1	ILMN_1226469	002000592	S	900	TGCTGGCACAGAAACTGTGAGTTCCACGTTACGGTATGGATTCTTGCTGC	7	+	27601631-27601680	7qA3	Mus musculus cytochrome P450, family 2, subfamily g, polypeptide 1 (Cyp2g1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_219877	ILMN_219877	CYP2G1	NM_013809.1	NM_013809.1		13108	7304990	NM_013809.1	Cyp2g1	NP_038837.1	ILMN_2959757	002710593	S	1475	TGGCCCGCTGAGTGCCCACTGCAAGACCAGCCAAGAGTCATCTGAGAGCT	7	+	27605838-27605848:27605849-27605887	7qA3	Mus musculus cytochrome P450, family 2, subfamily g, polypeptide 1 (Cyp2g1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_196194	ILMN_196194	V1RH7	NM_134216.1	NM_134216.1		171250	21717740	NM_134216.1	V1rh7	NP_598977.1	ILMN_2522468	000010360	S	709	CTGATGCTCTGTTTTGTTTTCTTCTACTGGACAGATTGTACCTTTTCCCT	13	-	22712146-22712195	13qA3.1	Mus musculus vomeronasal 1 receptor, H7 (V1rh7), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	MEEBO	ILMN_186554	ILMN_186554	CLCA3	scl21416.11_167				8567335	NM_017474	Clca3		ILMN_2690677	002690349	S	2572	ATCAGAAATCTCCAACATTGCACGGGTGTCTGTGTTCATCCCCGCTCAGG						A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence ISA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence ISA]		
Mus musculus	RefSeq	ILMN_193376	ILMN_261429	NSD1	NM_008739.3	NM_008739.3		18193	118918399	NM_008739.3	Nsd1	NP_032765.3	ILMN_2600763	007330703	S	9188	CAAACACTCAGGTGCTTTCAGATTTCAGTCTCGGGCAGTGGACATAGGGA	13	+	55416090-55416139	13qB1	Mus musculus nuclear receptor-binding SET-domain protein 1 (Nsd1), mRNA.	A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the addition of a methyl group onto lysine at position 36 of the histone H3 protein [goid 46975] [evidence IDA]; Interacting selectively with a retinoid X receptor [goid 46965] [evidence IPI]; Interacting selectively with an estrogen receptor [goid 30331] [evidence IPI]; Interacting selectively with a thyroid hormone receptor [goid 46966] [evidence IPI]; Catalysis of the addition of a methyl group onto lysine at position 20 of the histone H4 protein [goid 42799] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively, in a ligand dependent manner, with a nuclear receptor protein [goid 16922] [evidence IPI]	AI528500	AI528500
Mus musculus	RefSeq	ILMN_193376	ILMN_261429	NSD1	NM_008739.3	NM_008739.3		18193	118918399	NM_008739.3	Nsd1	NP_032765.3	ILMN_2496587	004180482	S	1271	TTGAAGGCAGACATCAATTTGAAGAACTACCTGTCCTTAGGAAAAGAGGG	13	+	55340144-55340193	13qB1	Mus musculus nuclear receptor-binding SET-domain protein 1 (Nsd1), mRNA.	A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the addition of a methyl group onto lysine at position 36 of the histone H3 protein [goid 46975] [evidence IDA]; Interacting selectively with a retinoid X receptor [goid 46965] [evidence IPI]; Interacting selectively with an estrogen receptor [goid 30331] [evidence IPI]; Interacting selectively with a thyroid hormone receptor [goid 46966] [evidence IPI]; Catalysis of the addition of a methyl group onto lysine at position 20 of the histone H4 protein [goid 42799] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively, in a ligand dependent manner, with a nuclear receptor protein [goid 16922] [evidence IPI]	AI528500	AI528500
Mus musculus	RefSeq	ILMN_193376	ILMN_261429	NSD1	NM_008739.3	NM_008739.3		18193	118918399	NM_008739.3	Nsd1	NP_032765.3	ILMN_1231734	003360743	S	228	TTCTGAGCCACTTAATGGGTGTACTATGCAGTTACCGACTGCTGCCAGTG	13	+	55314698-55314747	13qB1	Mus musculus nuclear receptor-binding SET-domain protein 1 (Nsd1), mRNA.	A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the addition of a methyl group onto lysine at position 36 of the histone H3 protein [goid 46975] [evidence IDA]; Interacting selectively with a retinoid X receptor [goid 46965] [evidence IPI]; Interacting selectively with an estrogen receptor [goid 30331] [evidence IPI]; Interacting selectively with a thyroid hormone receptor [goid 46966] [evidence IPI]; Catalysis of the addition of a methyl group onto lysine at position 20 of the histone H4 protein [goid 42799] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively, in a ligand dependent manner, with a nuclear receptor protein [goid 16922] [evidence IPI]	AI528500	AI528500
Mus musculus	RefSeq	ILMN_220130	ILMN_220130	MDM2	NM_010786.2	NM_010786.2		17246	31543243	NM_010786.2	Mdm2	NP_034916.1	ILMN_2850753	000670068	S	2573	CCTTTTTGCCTCAGCTCCGTGGTTCCTGGTGGTTGCCTATGTTTCAGGCC	10	-	117092302-117092351	10qD2	Mus musculus transformed mouse 3T3 cell double minute 2 (Mdm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IDA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one of the p53 family of proteins [goid 2039] [evidence IPI]	AA415488; Mdm-2; 1700007J15Rik	AA415488; Mdm-2; 1700007J15Rik
Mus musculus	RefSeq	ILMN_218368	ILMN_218368	REEP1	NM_178608.2	NM_178608.2		52250	31340809	NM_178608.2	Reep1	NP_848723.1	ILMN_2791644	004760630	S	3401	CTCTGACAGTGGACGCTCGAAGAGCTCATGTTCCAGATTGTGACTGTGCG	6	+	71739995-71740044	6qC1	Mus musculus receptor accessory protein 1 (Reep1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			AW558420; D6Ertd253e; C87808	AW558420; D6Ertd253e; C87808
Mus musculus	Riken	ILMN_202603	ILMN_202603	9430006E19RIK	ri|9430006E19|PX00108I01|AK020406|958					AK020406	9430006E19Rik		ILMN_1218044	001090706	S	811	TGGAGGTACAGCAGGAGAGCCTTATATGGTGGTGGGATTCCTGTGACCCC										
Mus musculus	RefSeq	ILMN_219972	ILMN_219972	ATG7	NM_028835.3	NM_028835.3		74244	146141136	NM_028835.3	Atg7	NP_083111.1	ILMN_1246724	005310746	S	2830	GCCCATGCACGGCTGGCTTAGCAGGTCTCAGGAAGGGAGACTAGAGAGGA				6qE3	Mus musculus autophagy-related 7 (yeast) (Atg7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The covalent or non-covalent attachment of lipid moieties to an amino acid in a protein [goid 6497] [evidence ISO]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein [goid 31401] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein [goid 31401] [evidence ISO]; The process whose specific outcome is the progression of a cardiac muscle cell over time, from its formation to the mature state [goid 55013] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21680] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The progression of a pyramidal neuron from its initial formation to its mature state [goid 21860] [evidence IMP]; Any process that modulates the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31396] [evidence IMP]; A process by which one or more moieties of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to a target protein [goid 32446] [evidence IMP]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nourishment [goid 42594] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the activation of the C-terminal carboxyl group of ubiquitin by the formation of a high-energy thiolester bond in an ATP-dependent manner [goid 4839] [evidence IDA]	Atg7l; Apg7l; 1810013K23Rik; Agp7	Atg7l; Apg7l; 1810013K23Rik; Agp7
Mus musculus	RefSeq	ILMN_209799	ILMN_209799	PTK2B	NM_172498.2	NM_172498.2		19229	142387203	NM_172498.2	Ptk2b	NP_766086.1	ILMN_1230007	004200088	S	3409	GAGTGTACCCCTAACGGCCAAGATGGCTTTCTGCATGGACATTTGAGAGC	14	-	66772543-66772592	14qD1	Mus musculus PTK2 protein tyrosine kinase 2 beta (Ptk2b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell. Complex formation involves dimerization of a receptor protein tyrosine kinase followed by the association of several different intracellular signaling molecules with the cytoplasmic tails of the receptors [goid 7172] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	PYK2; FAK2; E430023O05Rik; Raftk; CAKB; CAK[B]; A6; CAKbeta; PTK; CADTK; PKB	PYK2; FAK2; E430023O05Rik; Raftk; CAKB; CAK[B]; A6; CAKbeta; PTK; CADTK; PKB
Mus musculus	RefSeq	ILMN_209196	ILMN_209196	COG1	NM_013581.2	NM_013581.2		16834	15011848	NM_013581.2	Cog1	NP_038609.2	ILMN_2850849	006550204	S	2692	TCCCAGGAGCCCCATAACATACTGCCGCTGGCCTCCAGTCAGATCAGGTT	11	+	113522320-113522366:113522454-113522456	11qE2	Mus musculus component of oligomeric golgi complex 1 (Cog1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Ldlb; KIAA1381; mKIAA1381; 6030445I15	Ldlb; KIAA1381; mKIAA1381; 6030445I15
Mus musculus	RefSeq	ILMN_221480	ILMN_246539	2610307O08RIK	XM_921606.2	XM_921606.2		72512	94404724	XM_921606.2	2610307O08Rik	XP_926699.1	ILMN_2736197	004640328	S	2083	CGTCATCTTCCATATCTTCCATACGTCTTCCATCTTCCATACGTCTCTCT				18qB2	PREDICTED: Mus musculus RIKEN cDNA 2610307O08 gene, transcript variant 12 (2610307O08Rik), mRNA.					
Mus musculus	MEEBO	ILMN_217038	ILMN_217038	PSPN	scl49753.2.1_144				6679510	NM_008954	Pspn		ILMN_2773560	003520367	S	304	CATACCCAGCACAGTCTGGTACTGGCCCGGCTTCGAGGGCGGGGTCGAGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209374	ILMN_234564	1810041L15RIK	XM_128169.9	XM_128169.9		72301	149266777	XM_128169.9	1810041L15Rik	XP_128169.4	ILMN_2630355	005360333	S	42	GTAAGGAGAGGCTGCATCCCTGCAGGCAGTTGCTGGTGCCTGGCGTCCTT	15	-	84277436-84277485	15qE2	PREDICTED: Mus musculus RIKEN cDNA 1810041L15 gene, transcript variant 1 (1810041L15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_209374	ILMN_234564	1810041L15RIK	XM_128169.9	XM_128169.9		72301	149266777	XM_128169.9	1810041L15Rik	XP_128169.4	ILMN_1255516	004880491	S	4740	CCCTTAGAAAAATGCAGCTTCATGCCTACCGTGTGTCAGTACCACCATGG	15	-	84210760-84210809	15qE2	PREDICTED: Mus musculus RIKEN cDNA 1810041L15 gene, transcript variant 1 (1810041L15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_216147	ILMN_216147	TBRG1	scl0003566.1_12	NM_025289.1			42476293	NM_025289.1	Tbrg1		ILMN_2667842	001450220	S	551	GGAGGGAGGTGCTCGAAAACTGGTTCGACCCATTGCCCTGGATCCTTCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence ISS]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence ISS]; The directed movement of substances from the nucleolus to the nucleoplasm [goid 32066] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]		
Mus musculus	RefSeq	ILMN_196639	ILMN_244631	CDKN3	XM_919022.2	XM_919022.2		72391	94397385	XM_919022.2	Cdkn3	XP_924115.1	ILMN_1243616	001090382	S	587	CACCACAGCAAGCCATAGACAGCCTTCGAGATGTCAGAGGATCTGGGGCG				14qC1	PREDICTED: Mus musculus cyclin-dependent kinase inhibitor 3, transcript variant 5 (Cdkn3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence ISO]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISO]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence ISO]		
Mus musculus	RefSeq	ILMN_243744	ILMN_243744	LOC434019	NM_001034889.1	NM_001034889.1		434019	85702241	NM_001034889.1	LOC434019	NP_001030061.1	ILMN_2954749	006650593	S	460	CTATACTTTTCCAGCACTTGAGGGAGGCTTAAATCGACGCCCCAGTGCAT	6	+	60013109-60013145:60015326-60015338	6qB3	Mus musculus similar to RIKEN cDNA A530053G22 gene (LOC434019), mRNA.					
Mus musculus	RefSeq	ILMN_216912	ILMN_216912	SLC6A3	NM_010020.3	NM_010020.3		13162	118129796	NM_010020.3	Slc6a3	NP_034150.1	ILMN_2676852	007380445	S	3151	CTGTGAACTTTGGCCTAGCCTGTGTCCCATAGAAATGGCACCATGTGTCT	13	+	73715815-73715864	13qC1	Mus musculus solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 (Slc6a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IMP]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of, within or between cells [goid 15844] [evidence ISO]; The directed movement of dopamine into, out of, within or between cells. Dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 15872] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IMP]; The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42416] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42420] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IMP]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of dopamine from one side of the membrane to the other. Dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 5329] [evidence IMP]; Catalysis of the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of the membrane to the other [goid 8504] [evidence ISO]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dopamine(out) + Na+(out) = dopamine(in) + Na+(in) [goid 5330] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	DAT; Dat1	DAT; Dat1
Mus musculus	RefSeq	ILMN_217904	ILMN_217904	RALGDS	NM_009058.1	NM_009058.1		19730	6677734	NM_009058.1	Ralgds	NP_033084.1	ILMN_2689119	001770427	S	2133	ATCACCGACGCGCTCAGTGTGCACTCAGCTGGCTCTTCCAGCTCTGATGT	2	+	28404572-28404621	2qA3	Mus musculus ral guanine nucleotide dissociation stimulator (Ralgds), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rgds; mKIAA1308; Gnds	Rgds; mKIAA1308; Gnds
Mus musculus	RefSeq	ILMN_210530	ILMN_210530	ARL16	NM_197995.2	NM_197995.2		70317	91199553	NM_197995.2	Arl16	NP_932112.2	ILMN_1231868	006520440	S	978	AGTACAGACTCTGCCTTTCTGAGTTCCTATATCCTGACCATGTTGCCCAG	11	-	120326635-120326684	11qE2	Mus musculus ADP-ribosylation factor-like 16 (Arl16), mRNA.				2600005N12Rik	2600005N12Rik
Mus musculus	RefSeq	ILMN_196091	ILMN_196091	ZFP46	NM_009557.3	NM_009557.3		22704	76253915	NM_009557.3	Zfp46	NP_033583.2	ILMN_1215740	006510470	S	4447	GCAGATTCCCTTGGTATTGGTCAACCATCCTAGTGTCTTGTCTATAGCTG	4	+	135849667-135849716	4qD3	Mus musculus zinc finger protein 46 (Zfp46), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI426962; Zfp-46	AI426962; Zfp-46
Mus musculus	RefSeq	ILMN_212891	ILMN_233388	NUP37	NM_027191.1	NM_027191.1		69736	21312385	NM_027191.1	Nup37	NP_081467.1	ILMN_1217430	004290594	S	1076	CTGTATTTTTGATCCTTCACTTTGTATTTTTAGTATATATTTTGGAAAAA	10	+	87641000-87641049	10qC1	Mus musculus nucleoporin 37 (Nup37), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		2410003L22Rik; 2810039M17Rik	2410003L22Rik; 2810039M17Rik
Mus musculus	RefSeq	ILMN_214892	ILMN_214892	FBXO28	NM_175127.2	NM_175127.2		67948	65301478	NM_175127.2	Fbxo28	NP_780336.1	ILMN_2653143	000510736	S	2277	CTTGTAACTGGAAAAGCCTGTCTTGCGCTGTCAGCCTCCTGAATGGTCAC	1	-	184245819-184245868	1qH5	Mus musculus F-box protein 28 (Fbxo28), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0483; MGC90899; KIAA0483; Fbx28; D1Ertd578e; 5730505P19Rik; 4833428J17Rik	mKIAA0483; MGC90899; KIAA0483; Fbx28; D1Ertd578e; 5730505P19Rik; 4833428J17Rik
Mus musculus	RefSeq	ILMN_214892	ILMN_214892	FBXO28	NM_175127.2	NM_175127.2		67948	65301478	NM_175127.2	Fbxo28	NP_780336.1	ILMN_2756350	006480674	S	1392	AAGGTTATTTGTTTCTGCATATATGCACATTACATACGGATTTTAAACAA	1	-	184246704-184246753	1qH5	Mus musculus F-box protein 28 (Fbxo28), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0483; MGC90899; KIAA0483; Fbx28; D1Ertd578e; 5730505P19Rik; 4833428J17Rik	mKIAA0483; MGC90899; KIAA0483; Fbx28; D1Ertd578e; 5730505P19Rik; 4833428J17Rik
Mus musculus	MEEBO	ILMN_193103	ILMN_193103	4932415G12RIK	scl37591.4_195				21312823	NM_026339	4932415G12Rik		ILMN_2613731	000780612	S	3509	GCATTCCTTGGGGCGTGTCTACTCATTAGTTTTTGCTCTGCAAGCTCCAG										
Mus musculus	MEEBO	ILMN_193103	ILMN_193103	4932415G12RIK	scl37591.4_195				21312823	NM_026339	4932415G12Rik		ILMN_2613738	001660673	S	3518	GGGGCGTGTCTACTCATTAGTTTTTGCTCTGCAAGCTCCAGAATGTGTCT										
Mus musculus	RefSeq	ILMN_218248	ILMN_229567	4930404A10RIK	XM_484022.3	XM_484022.3		74847	94390091	XM_484022.3	4930404A10Rik	XP_484022.2	ILMN_2693549	001110411	S	1048	GCAGCTTCTGAGGTTGTATTTGCTGAGAAAACTGGCCCTCCAACCACTGA	11	+	54213326-54213375	11qB1.3	PREDICTED: Mus musculus RIKEN cDNA 4930404A10 gene (4930404A10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_238709	ILMN_238709	RALGPS2	NM_023884.2	NM_023884.2		78255	31560035	NM_023884.2	Ralgps2	NP_076373.2	ILMN_2884869	004390128	S	2531	CCTGCAGGAGGGACAAAGGCTGAGTGTTCACGTGCCAGCAGGCTCCAGAA	1	-	158645148-158645197	1qH1	Mus musculus Ral GEF with PH domain and SH3 binding motif 2 (Ralgps2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	2210408F11Rik; AU043409; 1810020P17Rik; AW046161; 9130014M22Rik; 4921528G01Rik	2210408F11Rik; AU043409; 1810020P17Rik; AW046161; 9130014M22Rik; 4921528G01Rik
Mus musculus	Riken	ILMN_206565	ILMN_206565	5930409M18RIK	ri|5930409M18|PX00055M11|AK077838|1713					AK077838	5930409M18Rik		ILMN_1218568	001170292	S	1636	GCTACAAGACTATGTAACTCAGACACCCTAGAGAAGCGCCTCATCATTTT										
Mus musculus	RefSeq	ILMN_209208	ILMN_213612	CTSB	NM_007798.2	NM_007798.2		13030	118131153	NM_007798.2	Ctsb	NP_031824.1	ILMN_2593604	003710358	S	4091	GGTGCCTCGGCCAGTTCAGTGGTCCATTCAACTTTGTAAGCACAGATTCC	14	+	63764111-63764160	14qD1	Mus musculus cathepsin B (Ctsb), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the activity of an enzyme [goid 50790] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213612	ILMN_213612	CTSB	NM_007798.2	NM_007798.2		13030	118131153	NM_007798.2	Ctsb	NP_031824.1	ILMN_2683316	000110121	S	1809	GGTCATGGTTTGCTGTGTGACCGACAGATAACCACAATGAAACTAGTCTG	14	+	63761829-63761878	14qD1	Mus musculus cathepsin B (Ctsb), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the activity of an enzyme [goid 50790] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187465	ILMN_235691	1700007E06RIK	XM_908448.2	XM_908448.2		75459	94399222	XM_908448.2	1700007E06Rik	XP_913541.1	ILMN_2444375	006290370	S	210	TCATGCGTACGAACCCCACACTAGCAGAGTCCATGCGCCGGCTAGAAGAC				15qE3	PREDICTED: Mus musculus RIKEN cDNA 1700007E06 gene (1700007E06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220526	ILMN_220526	1110002N22RIK	NM_183275.1	NM_183275.1		68550	34304070	NM_183275.1	1110002N22Rik	NP_899098.1	ILMN_2938179	002940201	S	919	AGCAGTTCCTCTCTGAGTCTGTGCTGAAGGAGCGGCCTCGGGTGTTCTTC	11	-	79953162-79953211	11qB5	Mus musculus RIKEN cDNA 1110002N22 gene (1110002N22Rik), mRNA.				FLJ22729	FLJ22729
Mus musculus	MEEBO	ILMN_217989	ILMN_217989	SLC7A7	scl45570.19.1_16	NM_011405.1			7106414	NM_011405.1	Slc7a7		ILMN_2723826	004390754	S	1423	TCTTTGTGGGCCTTTCTATTGTGGGTCAGCTTTATCTACGCTGGAAGGAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]		
Mus musculus	Riken	ILMN_203653	ILMN_203653	9430032E06RIK	ri|9430032E06|PX00108G18|AK034761|2952					AK034761	9430032E06Rik		ILMN_1224064	004810630	S	2490	CCAGCTAGGGTTAGCAGGAGACAAACAGGTAAGTAAGGCGCTGTCCTCAG										
Mus musculus	RefSeq	ILMN_190929	ILMN_234030	9430020K01RIK	NM_001081963.1	NM_001081963.1		240185	126506315	NM_001081963.1	9430020K01Rik	NP_001075432.1	ILMN_2474515	005490541	S	6471	GAATTGTGCCTGTGGTTGTTTCAGAACTTAAAGACATGATAGTGAGGTGG	18	+	4682607-4682656	18qA1	Mus musculus RIKEN cDNA 9430020K01 gene (9430020K01Rik), mRNA.				1110056P05Rik; mKIAA1462; Gm328; KIAA1462	1110056P05Rik; mKIAA1462; Gm328; KIAA1462
Mus musculus	RefSeq	ILMN_221468	ILMN_221468	ANKRD47	NM_030697.1	NM_030697.1		80880	13507631	NM_030697.1	Ankrd47	NP_109622.1	ILMN_2963483	006510397	S	2464	GAGCTGCTAACTACATCTAGACTCTCTCTGCTGTCTGAATCACAGCAGGG	17	+	33428704-33428753	17qB1	Mus musculus ankyrin repeat domain 47 (Ankrd47), mRNA.				0610013D04Rik; NG28; D17Ertd288e	0610013D04Rik; NG28; D17Ertd288e
Mus musculus	Riken	ILMN_203048	ILMN_203048	A430106B04RIK	ri|A430106B04|PX00064L03|AK040546|1289					AK040546	A430106B04Rik		ILMN_1255676	006980296	S	1212	CTCCCTTTGTCAGCCTTGTAGCCAAAACTGGCTGGCCATGTATTAGGCAC										
Mus musculus	RefSeq	ILMN_213240	ILMN_213240	PDHB	NM_024221.3	NM_024221.3		68263	110227587	NM_024221.3	Pdhb	NP_077183.1	ILMN_3116570	006380280	A	882	GGACATCGAAGCCATAGAAGCCAGTGTGATGAAGACAAATCATCTCGTGA	14	-	8999289-8999338	14qA1	Mus musculus pyruvate dehydrogenase (lipoamide) beta (Pdhb), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2 [goid 4739] [evidence IEA]	2610103L06Rik; AL024199; C81408	2610103L06Rik; AL024199; C81408
Mus musculus	RefSeq	ILMN_213240	ILMN_213240	PDHB	NM_024221.3	NM_024221.3		68263	110227587	NM_024221.3	Pdhb	NP_077183.1	ILMN_3041839	003440187	I	582	GGTCAGCCCCTGGAATTCCGAGGATGCAAAAGGACTTATTAAATCGGCCA	14	-	9002692-9002741	14qA1	Mus musculus pyruvate dehydrogenase (lipoamide) beta (Pdhb), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2 [goid 4739] [evidence IEA]	2610103L06Rik; AL024199; C81408	2610103L06Rik; AL024199; C81408
Mus musculus	RefSeq	ILMN_197686	ILMN_197686	LOC268800	XM_194965.2	XM_194965.2			38077380	XM_194965.2	LOC268800		ILMN_1251920	003190133	S	361	CCACCTCTCAATGGAGGGTTGCAACAGCAGGCATCTTTTGGATGGAGAGA										
Mus musculus	RefSeq	ILMN_215664	ILMN_215664	OPLAH	NM_153122.2	NM_153122.2		75475	118130148	NM_153122.2	Oplah	NP_694762.1	ILMN_2662191	000730612	S	3872	GCTATATCCAGCCTTCCCAGAGCGAGGCAGTGTGTATGAGTACCGCCGCG	15	-	76127081-76127130	15qD3	Mus musculus 5-oxoprolinase (ATP-hydrolysing) (Oplah), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + 5-oxo-L-proline + 2 H2O = ADP + phosphate + L-glutamate [goid 17168] [evidence IEA]	MGC28663; MGC36824; 1700010G02Rik	MGC28663; MGC36824; 1700010G02Rik
Mus musculus	RefSeq	ILMN_196983	ILMN_231401	LOC382606	XM_985913.1	XM_985913.1		382606	94394058	XM_985913.1	LOC382606	XP_991007.1	ILMN_2526487	001740600	S	241	CTGGTCATCATCACAGTGGTGGACGTCAGCAAGAGGGAGCAAGCCGACCC				12qC1	PREDICTED: Mus musculus similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M) (LOC382606), mRNA.					
Mus musculus	RefSeq	ILMN_197420	ILMN_249980	LOC640543	XM_001003231.1	XM_001003231.1		640543	94366844	XM_001003231.1	LOC640543	XP_001003231.1	ILMN_1225830	003840368	S	1978	GGGACTCTGATGGCCGGACACACTATCCGAATTCATCTGGAGCTCTACCC				2qE5	PREDICTED: Mus musculus similar to transglutaminase 7 (LOC640543), mRNA.					
Mus musculus	Riken	ILMN_206733	ILMN_206733	PTPN13	ri|D230007K04|PX00187H08|AK084198|3410					AK084198	Ptpn13		ILMN_1231842	006280338	S	3122	GCCCATGTCCCCCACACCCATAGCCATCTCAGGCAGTTGGTTCAGTACAG						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_202916	ILMN_202916	PTPN14	ri|4732456F18|PX00051F16|AK028783|3519					AK028783	Ptpn14		ILMN_2553305	000110678	S	3265	AGTGATTGGGTGTGTTCCTGAGGAGTTTACCACTGGGTACTGGGCTCCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_245321	ILMN_245321	MOD1	NM_008615.1	NM_008615.1		17436	6678911	NM_008615.1	Mod1	NP_032641.1	ILMN_2937261	001570338	S	2865	TCCTGACTTTGAAGTTGCTTTAAAGCCTGTGTGGTTTCCGGCGGGCAGGC	9	-	86475195-86475244	9qE3.1	Mus musculus malic enzyme, supernatant (Mod1), mRNA.				Mod-1; MGC91072; Mdh-1; D9Ertd267e	Mod-1; MGC91072; Mdh-1; D9Ertd267e
Mus musculus	Riken	ILMN_206223	ILMN_206223	4921521J11RIK	ri|C920007J03|PX00178E12|AK083331|2328					AK083331	4921521J11Rik		ILMN_1237095	007100279	S	1944	CAGGTGAGAGGGAGGCTTGGAGCAATTAACTTTAGGGAGCCAGGAAAGAC										
Mus musculus	RefSeq	ILMN_198462	ILMN_235456	GM156	NM_001014997.1	NM_001014997.1		232415	85701511	NM_001014997.1	Gm156	NP_001014997.1	ILMN_1258224	002340072	S	287	CACGAAAAGGCTGCTATACATGTCAAGGAGGGTGGTCTTGCTGTGGAGGA	6	-	129721743-129721790:129722369-129722370	6qF3	Mus musculus gene model 156, (NCBI) (Gm156), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Klrh1	Klrh1
Mus musculus	RefSeq	ILMN_235456	ILMN_235456	GM156	NM_001014997.1	NM_001014997.1		232415	85701511	NM_001014997.1	Gm156	NP_001014997.1	ILMN_2987890	002940291	S	283	GCTGCACGAAAAGGCTGCTATACATGTCAAGGAGGGTGGTCTTGCTGTGG	6	-	129721747-129721790:129722369-129722374	6qF3	Mus musculus gene model 156, (NCBI) (Gm156), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Klrh1	Klrh1
Mus musculus	RefSeq	ILMN_215641	ILMN_215641	RAB37	NM_021411.2	NM_021411.2		58222	31543567	NM_021411.2	Rab37	NP_067386.2	ILMN_2948286	002000056	S	1742	GAAGTATGAGCAAGTCTGGGGTACGGAGAGGGGCAACAAGCCCTGTAGGC	11	+	114977886-114977935	11qE2	Mus musculus RAB37, member of RAS oncogene family (Rab37), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B230331O03Rik; B230354I04Rik; MGC157622	B230331O03Rik; B230354I04Rik; MGC157622
Mus musculus	Riken	ILMN_205570	ILMN_205570	9430018C17RIK	ri|9430018C17|PX00107D18|AK034644|2306					AK034644	9430018C17Rik		ILMN_1246730	000840239	S	1668	GTAGAGGGCAAAGAGGCACACACATGCCACAGTGCACCTAGAGGTCAGAG										
Mus musculus	Riken	ILMN_201640	ILMN_201640	AUH	ri|1110025O22|R000016P20|AK003929|575					AK003929	Auh		ILMN_2543417	000780274	S	407	CCTTTTTGGTGGCCGCTCCAGAGTCACAGCTCACAGAAGCCAGAAGTGAC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9083] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps: poly(A) tail shortening, deadenylylation-dependent decapping, and decay of the transcript body, and that can regulate mRNA stability [goid 288] [evidence TAS]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O [goid 4300] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = trans-3-methylglutaconyl-CoA + H2O [goid 4490] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188640	ILMN_188640	FAS	NM_007987.1	NM_007987.1		14102	6679750	NM_007987.1	Fas	NP_032013.1	ILMN_2454420	002810554	S	608	CGAAAGTACCGGAAAAGAAAGTGCTGGAAAAGGAGACAGGATGACCCTGA	19	+	34393811-34393860	19qC1	Mus musculus Fas (TNF receptor superfamily member 6) (Fas), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells [goid 19724] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]; The process of apoptosis in inflammatory cells, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage [goid 6925] [evidence IDA]; The process of apoptosis in inflammatory cells, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage [goid 6925] [evidence IMP]; The process of apoptosis in transformed cells, cells that have undergone changes manifested by escape from control mechanisms, increased growth potential, alterations in the cell surface, karyotypic abnormalities, morphological and biochemical deviations from the norm [goid 6927] [evidence IDA]; The process of apoptosis in activated T cells [goid 6924] [evidence IDA]; The process of apoptosis in activated T cells [goid 6924] [evidence IMP];  [goid 8625] [evidence IMP];  [goid 8625] [evidence IDA];  [goid 8625] [evidence IMP];  [goid 8625] [evidence IDA];  [goid 8625] [evidence IGI];  [goid 8625] [evidence IMP]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; A organ system process carried out by any of the organs or tissues of the renal system. The renal system is responsible for fluid volume regulation and detoxification in an organism [goid 3014] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of B cell activation [goid 50869] [evidence IMP]; Any process that modulates the frequency, rate or extent of lymphocyte differentiation [goid 45619] [evidence IMP]; Any process that modulates the frequency, rate or extent of myeloid cell differentiation [goid 45637] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 2377] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CD95; AI196731; TNFR6; Tnfrsf6; APT1; lpr; APO-1	CD95; AI196731; TNFR6; Tnfrsf6; APT1; lpr; APO-1
Mus musculus	RefSeq	ILMN_188640	ILMN_188640	FAS	NM_007987.1	NM_007987.1		14102	6679750	NM_007987.1	Fas	NP_032013.1	ILMN_2902979	005890221	S	1099	ATGCCAACTGTATTGACATTGGCAACTCCTGGTGTGTTCTCTTTGCCAGC	19	+	34401880-34401929	19qC1	Mus musculus Fas (TNF receptor superfamily member 6) (Fas), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells [goid 19724] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]; The process of apoptosis in inflammatory cells, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage [goid 6925] [evidence IDA]; The process of apoptosis in inflammatory cells, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage [goid 6925] [evidence IMP]; The process of apoptosis in transformed cells, cells that have undergone changes manifested by escape from control mechanisms, increased growth potential, alterations in the cell surface, karyotypic abnormalities, morphological and biochemical deviations from the norm [goid 6927] [evidence IDA]; The process of apoptosis in activated T cells [goid 6924] [evidence IDA]; The process of apoptosis in activated T cells [goid 6924] [evidence IMP];  [goid 8625] [evidence IMP];  [goid 8625] [evidence IDA];  [goid 8625] [evidence IMP];  [goid 8625] [evidence IDA];  [goid 8625] [evidence IGI];  [goid 8625] [evidence IMP]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; A organ system process carried out by any of the organs or tissues of the renal system. The renal system is responsible for fluid volume regulation and detoxification in an organism [goid 3014] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of B cell activation [goid 50869] [evidence IMP]; Any process that modulates the frequency, rate or extent of lymphocyte differentiation [goid 45619] [evidence IMP]; Any process that modulates the frequency, rate or extent of myeloid cell differentiation [goid 45637] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 2377] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CD95; AI196731; TNFR6; Tnfrsf6; APT1; lpr; APO-1	CD95; AI196731; TNFR6; Tnfrsf6; APT1; lpr; APO-1
Mus musculus	RefSeq	ILMN_188640	ILMN_188640	FAS	NM_007987.1	NM_007987.1		14102	6679750	NM_007987.1	Fas	NP_032013.1	ILMN_2479290	000240301	S	394	CACCCTGACCCAGAATACCAAGTGCAAGTGCAAACCAGACTTCTACTGCG	19	+	34391081-34391130	19qC1	Mus musculus Fas (TNF receptor superfamily member 6) (Fas), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells [goid 19724] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]; The process of apoptosis in inflammatory cells, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage [goid 6925] [evidence IDA]; The process of apoptosis in inflammatory cells, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage [goid 6925] [evidence IMP]; The process of apoptosis in transformed cells, cells that have undergone changes manifested by escape from control mechanisms, increased growth potential, alterations in the cell surface, karyotypic abnormalities, morphological and biochemical deviations from the norm [goid 6927] [evidence IDA]; The process of apoptosis in activated T cells [goid 6924] [evidence IDA]; The process of apoptosis in activated T cells [goid 6924] [evidence IMP];  [goid 8625] [evidence IMP];  [goid 8625] [evidence IDA];  [goid 8625] [evidence IMP];  [goid 8625] [evidence IDA];  [goid 8625] [evidence IGI];  [goid 8625] [evidence IMP]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; A organ system process carried out by any of the organs or tissues of the renal system. The renal system is responsible for fluid volume regulation and detoxification in an organism [goid 3014] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of B cell activation [goid 50869] [evidence IMP]; Any process that modulates the frequency, rate or extent of lymphocyte differentiation [goid 45619] [evidence IMP]; Any process that modulates the frequency, rate or extent of myeloid cell differentiation [goid 45637] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 2377] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CD95; AI196731; TNFR6; Tnfrsf6; APT1; lpr; APO-1	CD95; AI196731; TNFR6; Tnfrsf6; APT1; lpr; APO-1
Mus musculus	RefSeq	ILMN_212777	ILMN_212777	E030011K20RIK	XM_149293.6	XM_149293.6		208613	149250854	XM_149293.6	E030011K20Rik	XP_149293.4	ILMN_2630201	002750722	S	789	TATTTTGAAATATTTACAAAGCAATTTTGTTCTTTAAACTTCCTACCTTC	3	-	27765020-27765069	3qA3	PREDICTED: Mus musculus RIKEN cDNA E030011K20 gene (E030011K20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_198088	ILMN_198088	LOC277868	XM_205561.2	XM_205561.2			38081784	XM_205561.2	LOC277868		ILMN_1244772	006980079	S	755	CACAAGAACGTCCTCCCTTTGGATCTTCTGCTTGGTTCAGTTTCTGCAGC										
Mus musculus	MEEBO	ILMN_187352	ILMN_187352	SCL0002434.1_7	scl0002434.1_7	BC068158.1			45768385	BC068158.1	scl0002434.1_7		ILMN_2443375	006040154	S	6	GCACACCACCTGCTCCAGATAATGGGACTTCAGCCTGGGGTGAGCCAAAT										
Mus musculus	Riken	ILMN_203749	ILMN_203749	5730481H23RIK	ri|9930034E13|PX00120O08|AK036995|3649					AK036995	5730481H23Rik		ILMN_1248214	001580468	S	3159	CAGCAGTACACACTACATCTGCCCATCCCACACATTTCCCACGGAACACA										
Mus musculus	RefSeq	ILMN_251157	ILMN_251157	ZDHHC6	NM_001033573.1	NM_001033573.1		66980	75992951	NM_001033573.1	Zdhhc6	NP_001028745.1	ILMN_3068103	005420189	I	289	GACCTAGTCGACCCAGCATCTCCAAAATATCGAGCCCAGACCTCGCTTAA	19	-	55390184-55390233	19qD2	Mus musculus zinc finger, DHHC domain containing 6 (Zdhhc6), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C77369; 2400007G07Rik; AI462345; 5930409M18Rik	C77369; 2400007G07Rik; AI462345; 5930409M18Rik
Mus musculus	RefSeq	ILMN_221629	ILMN_310974	LOC100046518	XM_001476353.1	XM_001476353.1		100046518	149264148	XM_001476353.1	LOC100046518	XP_001476403.1	ILMN_2738123	001470392	S	3410	GCCCTGGTCCCTCTAGCCTCCGTTTTTGGCTACTAACTGTCACAGTATAC					PREDICTED: Mus musculus similar to Gprin1 protein (LOC100046518), mRNA.					
Mus musculus	RefSeq	ILMN_211166	ILMN_211166	LRRIQ4	NM_026668.2	NM_026668.2		68307	124286819	NM_026668.2	Lrriq4	NP_080944.2	ILMN_2613208	004490446	S	2234	AGGGAATAAAAAGTAATTATGTAAATGAATTAATGAAAATAAAGATTGCT	3	+	30571200-30571215:30571216-30571249	3qA3	Mus musculus leucine-rich repeats and IQ motif containing 4 (Lrriq4), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215603	ILMN_215603	HTR2C	NM_008312.3	NM_008312.3		15560	142373665	NM_008312.3	Htr2c	NP_032338.2	ILMN_1216607	005870280	S	4083	GGCAGAGAAACTGATATAGAAAGTGCTGGAGAAAACTCCTTCAGCAGTCC	X	+	143631153-143631202	XqF2	Mus musculus 5-hydroxytryptamine (serotonin) receptor 2C (Htr2c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of molecular signals in which a cell uses a water-soluble inositol phosphate to convert an extracellular signal into a response [goid 48016] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 51378] [evidence ISO]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISO]	Htr1c; 5-HT2cR; 5HT1c; SR1	Htr1c; 5-HT2cR; 5HT1c; SR1
Mus musculus	Riken	ILMN_203224	ILMN_203224	C030017I19RIK	ri|C030017I19|PX00074G16|AK047722|1767					AK047722	C030017I19Rik		ILMN_1241208	007510044	S	1168	GTCAGGGTAGAGAGATGGCTCGGGGCTAAGGGAACTTGCTGATCTTTCAG										
Mus musculus	MEEBO	ILMN_216642	ILMN_216642	1700060C20RIK	scl20005.3.1_300	XM_149230.1			20861271	XM_149230.1	1700060C20Rik		ILMN_2673507	004200537	S	519	ATTCCTTGACAAGGTAACCCCGGCCAGCTTTGCCATATGAGACTCTGCAG										
Mus musculus	RefSeq	ILMN_221577	ILMN_221577	2310043L02RIK	NM_027157.2	NM_027157.2		69664	141801820	NM_027157.2	2310043L02Rik	NP_081433.1	ILMN_1257063	005570608	S	635	CCCACAGGCTGACCACCAAATTGTTCTGGATGTATTGCATCTGAAACTCT	11	-	99441646-99441695	11qD	Mus musculus RIKEN cDNA 2310043L02 gene (2310043L02Rik), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			AI592983	AI592983
Mus musculus	RefSeq	ILMN_215945	ILMN_215945	SPON1	NM_145584.1	NM_145584.1		233744	21704173	NM_145584.1	Spon1	NP_663559.1	ILMN_2665535	002100762	S	3917	GTACTTTAAGAATCTCCATTCAACATATCAGAATATGTCCAGCCACATCT	7	+	121184782-121184831	7qF1	Mus musculus spondin 1, (f-spondin) extracellular matrix protein (Spon1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW455831; AI666765; BC020531; D330035F22Rik	AW455831; AI666765; BC020531; D330035F22Rik
Mus musculus	MEEBO	ILMN_190367	ILMN_190367	DSCR1	scl0001845.1_43				7839596	AF260717	Dscr1		ILMN_2469555	004010390	S	19	GAGAGGTGGCGGAGGCGGTCGAGGCACGGGCGCCCCGTAGGGTGACTCTG										
Mus musculus	RefSeq	ILMN_207469	ILMN_207469	ACPP	NM_019807.2	NM_019807.2		56318	46575783	NM_019807.2	Acpp	NP_062781.2	ILMN_3127490	007320220	A	879	TGCAACTCAGCCACAGAAGTATAAAAAGCTGGTCATGTATTCCGCACACG	9	-	104209314-104209318:104211740-104211784	9qF1	Mus musculus acid phosphatase, prostate (Acpp), transcript variant 2, mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence ISS]	A030005E02Rik; Ppal; Lap; PAP; AI324033	A030005E02Rik; Ppal; Lap; PAP; AI324033
Mus musculus	RefSeq	ILMN_207469	ILMN_207469	ACPP	NM_019807.2	NM_019807.2		56318	46575783	NM_019807.2	Acpp	NP_062781.2	ILMN_2587757	000990044	I	2095	CCCCGTGGAAATAACTGTCGCCTCGCAGTAAGGCAAGTGAGAAGCAGGGA	9	-	104201852-104201901	9qF1	Mus musculus acid phosphatase, prostate (Acpp), transcript variant 2, mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence ISS]	A030005E02Rik; Ppal; Lap; PAP; AI324033	A030005E02Rik; Ppal; Lap; PAP; AI324033
Mus musculus	Riken	ILMN_204070	ILMN_204070	FMO1	ri|A630093H08|PX00148K05|AK042457|1488					AK042457	Fmo1		ILMN_2562131	000240437	S	1312	AACTCTGACTCAGCGAACTCAGCCTGAGCTGTGGACTGTCAGCAAACACC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	Riken	ILMN_203684	ILMN_203684	9530080F18RIK	ri|9530080F18|PX00113H10|AK035640|2631					AK035640	9530080F18Rik		ILMN_1259842	007150075	S	2170	TTGGGTGGAGCGCACCCGTGGCAATGAAATTCACCTTCAAATCCAAGAGC										
Mus musculus	RefSeq	ILMN_188895	ILMN_191724	V1RC26	NM_134181.1	NM_134181.1		171199	21717690	NM_134181.1	V1rc26	NP_598942.1	ILMN_2456634	006960091	S	418	AGGTTGATCTTCTATGTTGCTGGTTTTACCAATGTGAGTGGAACCCACCA	6	-	57340094-57340143	6qB3	Mus musculus vomeronasal 1 receptor, C26 (V1rc26), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_191724	ILMN_191724	V1RC26	NM_134181.1	NM_134181.1		171199	21717690	NM_134181.1	V1rc26	NP_598942.1	ILMN_1240473	000130324	S	801	GGTGATGTATGCCTATCCCACAATTTCTCCTTTAGTTCAAATCACTTCTG	6	-	57339711-57339760	6qB3	Mus musculus vomeronasal 1 receptor, C26 (V1rc26), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_200706	ILMN_200706	LOC383463	XM_357079.1	XM_357079.1			38085347	XM_357079.1	LOC383463		ILMN_1233608	003780370	S	906	CTTCAGTGGAGGAAGTTACGAGGCGGCAAGCCTGTTGTCTGCCCTACCTC										
Mus musculus	RefSeq	ILMN_188432	ILMN_188432	ZFP566	NM_152814.2	NM_152814.2		72556	124269713	NM_152814.2	Zfp566	NP_690027.1	ILMN_2452628	002450592	S	1346	GGTGGTAAGAAAGCCTACGAAGATGAGGACGGTGGGAAGAACTTTATCTA	7	-	30862652-30862701	7qB1	Mus musculus zinc finger protein 566 (Zfp566), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2700043M03Rik; mszf4	2700043M03Rik; mszf4
Mus musculus	Riken	ILMN_203277	ILMN_203277	9430035E05RIK	ri|9430035E05|PX00108K18|AK034771|1772					AK034771	9430035E05Rik		ILMN_2556075	004480528	S	870	GAGAGATGACTGTTAACCTTCCCTACCGTGCTTAGGGTCAGTCAACCCGC										
Mus musculus	RefSeq	ILMN_213970	ILMN_255823	ELOVL1	NM_001039176.1	NM_001039176.1		54325	85702352	NM_001039176.1	Elovl1	NP_001034265.1	ILMN_2771824	007510538	S	276	GCTTGGGCCTCGAATCATGGCTAATCGGAAGCCCTTCCAACTTCGAGGCT	4	+	118103405-118103454	4qD2.1	Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 (Elovl1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]		AA407424; BB151133; Ssc1	AA407424; BB151133; Ssc1
Mus musculus	RefSeq	ILMN_199713	ILMN_199713	LOC382908	XM_356746.1	XM_356746.1			38076453	XM_356746.1	LOC382908		ILMN_2536215	001740564	S	411	ACAGGATGACCAGCACAAGAACATATGCCAGGTCCTGATAGAGATTGGGC										
Mus musculus	RefSeq	ILMN_225367	ILMN_225367	LRRC16B	NM_001024645.1	NM_001024645.1		268747	66912204	NM_001024645.1	Lrrc16b	NP_001019816.1	ILMN_2807834	001400437	S	4284	TGCTGAACACCCTCCCCAGCCTTCCGCGACATGTGCCTCATAAGGACTCA	14	+	56126787-56126836	14qC3	Mus musculus leucine rich repeat containing 16B (Lrrc16b), mRNA.				mFLJ00240	mFLJ00240
Mus musculus	RefSeq	ILMN_186221	ILMN_225367	LRRC16B	NM_001024645.1	NM_001024645.1		268747	66912204	NM_001024645.1	Lrrc16b	NP_001019816.1	ILMN_2525156	001990273	S	4195	GTCCTGTGACAAACTGGAACCCGATAGGAGACAACCACCTGACCCTACAG	14	+	56126583-56126632	14qC3	Mus musculus leucine rich repeat containing 16B (Lrrc16b), mRNA.				mFLJ00240	mFLJ00240
Mus musculus	MEEBO	ILMN_184888	ILMN_184888	TNFRSF13B	scl41469.8_427				10946667	NM_021349	Tnfrsf13b		ILMN_2422416	004280296	S	2	GCATCAAGAACATAGGGTGCAGAGACCAGCCTCGGCTTCAAAGAATCGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196255	ILMN_251294	2310081J21RIK	XM_991450.1	XM_991450.1		69211	94395109	XM_991450.1	2310081J21Rik	XP_996544.1	ILMN_1236974	003400601	S	1223	CTGTGATGGTCTAGGCTTCCCATACTCAGAGCACCAGGCTAAGAACCAGG	13	+	50358920-50358969	13qA5	PREDICTED: Mus musculus RIKEN cDNA 2310081J21 gene (2310081J21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213479	ILMN_229139	D14ABB1E	XM_897674.2	XM_897674.2		218850	94396847	XM_897674.2	D14Abb1e	XP_902767.1	ILMN_2703685	002750564	S	4501	GTTGAGATTTTGTCTTATCACAGTTGTGATTCACAAACTCGAAATGCTCC	14	+	26306574-26306623		PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 3 (D14Abb1e), mRNA.					
Mus musculus	RefSeq	ILMN_213479	ILMN_229139	D14ABB1E	XM_897674.2	XM_897674.2		218850	94396847	XM_897674.2	D14Abb1e	XP_902767.1	ILMN_2637422	003850309	S	3706	GAGCCGCTCTGTTCTGAACATTTAAAAGATAACAACTCTAATGAACAGTA	14	+	26299089-26299138		PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 3 (D14Abb1e), mRNA.					
Mus musculus	MEEBO	ILMN_190752	ILMN_190752	SCL0001418.1_29	scl0001418.1_29	AK032724.1			26328522	AK032724.1	scl0001418.1_29		ILMN_2472974	007320037	S	20	TTTTCATTTGAACCAAAAATCCGATCTCCTAGAAGATTTATTGGTAGTCC										
Mus musculus	RefSeq	ILMN_211331	ILMN_211331	RAB1B	NM_029576.1	NM_029576.1		76308	21313161	NM_029576.1	Rab1b	NP_083852.1	ILMN_2887208	003130356	S	1481	ACCTGCTTCTCTGGGGAATGTGGGTGCAGCTTGGGGTTGTGGGGCTCTTC	19	-	5099511-5099560	19qA	Mus musculus RAB1B, member RAS oncogene family (Rab1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	1110011F09Rik	1110011F09Rik
Mus musculus	RefSeq	ILMN_211331	ILMN_211331	RAB1B	NM_029576.1	NM_029576.1		76308	21313161	NM_029576.1	Rab1b	NP_083852.1	ILMN_2693124	001170482	S	261	AGCGGTTCAGGACCATCACTTCCAGCTACTATCGCGGGGCTCATGGCATC	19	-	5104667-5104716	19qA	Mus musculus RAB1B, member RAS oncogene family (Rab1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	1110011F09Rik	1110011F09Rik
Mus musculus	RefSeq	ILMN_200983	ILMN_200983	LOC381937	XM_355961.1	XM_355961.1			38087628	XM_355961.1	LOC381937		ILMN_2540692	006290685	S	121	TAACAGCTGACCATCATTGAGAAATTGGACTACAGATTCATACCTGTTGG										
Mus musculus	RefSeq	ILMN_219223	ILMN_219223	SLC16A9	NM_025807.1	NM_025807.1		66859	21313263	NM_025807.1	Slc16a9	NP_080083.2	ILMN_2922560	007320008	S	3371	AACTAAAGCCTAACTCCAGCTCCAGGGGATCCGGCACCCTCTTCTGTCCC	10	+	69681116-69681165	10qB5.3	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 9 (Slc16a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	1200003C15Rik; AI552636; 4930425B13Rik	1200003C15Rik; AI552636; 4930425B13Rik
Mus musculus	MEEBO	ILMN_188438	ILMN_188438	2810405I11RIK	scl14871.1.1_52				13195617	NM_024190	2810405I11Rik		ILMN_1213823	006420292	S	20	CCCCCCTTTAGGTCCCTGGCCTTTCTTGAAATTTACAAGTTCCTTGTCCA										
Mus musculus	RefSeq	ILMN_222271	ILMN_222271	MILL2	NM_153761.2	NM_153761.2		243864	52693918	NM_153761.2	Mill2	NP_715642.2	ILMN_2747176	001710278	S	669	CAGAGATACCTCGCTTCCTTGAGAAACGGTCTGCAGGATACAGGACCCCC	7	+	19441988-19442030:19443490-19443496	7qA3	Mus musculus MHC I like leukocyte 2 (Mill2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222271	ILMN_222271	MILL2	NM_153761.2	NM_153761.2		243864	52693918	NM_153761.2	Mill2	NP_715642.2	ILMN_3113845	006250241	A	680	CGCTTCCTTGAGAAACGGTCTGCAGGATACAGGACCCCCAATGGTAACTG	7	+	19441999-19442030:19443490-19443507	7qA3	Mus musculus MHC I like leukocyte 2 (Mill2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_201422	ILMN_222271	MILL2	NM_153761.2	NM_153761.2		243864	52693918	NM_153761.2	Mill2	NP_715642.2	ILMN_2542237	002760367	S	950	GAGGCATGGCAACCATAGCATCATGCAGACAGCTGTCTCTGGGCATGCTG	7	+	19443728-19443768:19443873-19443881	7qA3	Mus musculus MHC I like leukocyte 2 (Mill2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	Riken	ILMN_207056	ILMN_207056	8030467N07RIK	ri|8030467N07|PX00103I16|AK078769|2933					AK078769	8030467N07Rik		ILMN_2584709	002140414	S	2627	AAGTCACCGCCTCTCCAGAGCCATTAATGAACCTGGTCTTCGGGAGGAGG										
Mus musculus	Riken	ILMN_206412	ILMN_206412	C230015M18RIK	ri|C230015M18|PX00173L20|AK082156|4401					AK082156	C230015M18Rik		ILMN_2579890	002630709	S	3993	GTGGATTCTTAATGGGCAGCGAGTCTGCGAATACAGCCTGCAGCACTTCC										
Mus musculus	MEEBO	ILMN_184622	ILMN_184622	MUG-PS1	scl017835.2_13						Mug-ps1		ILMN_1252625	000870019	S	10	CTGTACAGGTTATGGATGTCTGAGAACAGATACTCAATACGACAGGGAAG										
Mus musculus	RefSeq	ILMN_200163	ILMN_200163	LOC385838	XM_358966.1	XM_358966.1			38080744	XM_358966.1	LOC385838		ILMN_1256573	004150609	S	1282	TCCAGGGTACCAGGAGAACATGGCCCACATGAACAACTAAGCTTTGGCTC										
Mus musculus	RefSeq	ILMN_189687	ILMN_259000	CPT1C	NM_153679.1	NM_153679.1		78070	24211026	NM_153679.1	Cpt1c	NP_710146.1	ILMN_2734560	000520750	S	2542	CTGTAAGACTGTGGACCCCAATACCCCTACATCCTCCACCAACTTGTGAG	7	-	52214867-52214868:52214869-52214916	7qB4	Mus musculus carnitine palmitoyltransferase 1c (Cpt1c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine [goid 4095] [evidence IEA]	6530437J22Rik; MGC101932; 9630004I06Rik	6530437J22Rik; MGC101932; 9630004I06Rik
Mus musculus	RefSeq	ILMN_212859	ILMN_212859	MFNG	NM_008595.2	NM_008595.2		17305	118130740	NM_008595.2	Mfng	NP_032621.1	ILMN_2687661	007320731	S	1766	GGCCAAGACAATCTAAAGTTGTTCTCCCTAACACCTCATCTGTAAGAAAT	15	-	78586331-78586380	15qE1	Mus musculus MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase (Mfng), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: transfers a beta-D-GlcNAc residue from UDP-D-GlcNAc to the fucose residue of a fucosylated protein acceptor [goid 33829] [evidence IEA]	AW546563	AW546563
Mus musculus	RefSeq	ILMN_217348	ILMN_316848	LOC637353	XM_001479982.1	XM_001479982.1		637353	149253241	XM_001479982.1	LOC637353	XP_001480032.1	ILMN_1228608	007150451	S	207	TCCAGCCGCCTCCCTCCGACGGCCCTCGCCGCGCAGGCCGGGTCGCCTCT					PREDICTED: Mus musculus similar to Anp32b protein (LOC637353), mRNA.					
Mus musculus	MEEBO	ILMN_189954	ILMN_189954	2310007O11RIK	scl14834.1.1_106						2310007O11Rik		ILMN_2465905	004920044	S	2	GATCTGCTGTTGCTGGGACTGAGCGTGGACTTGATGCAGTGACAACAAAT										
Mus musculus	RefSeq	ILMN_189811	ILMN_189811	TNFRSF21	NM_178589.2	NM_178589.2		94185	31341673	NM_178589.2	Tnfrsf21	NP_848704.1	ILMN_2901626	006560204	S	3216	TTAGGGACACCTCTGCTGCACCTTGGAAAGCCAACCTTAAGTGCCAGTGG	17	+	42552136-42552185	17qB3	Mus musculus tumor necrosis factor receptor superfamily, member 21 (Tnfrsf21), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	R74815; AA959878; TR7; DR6	R74815; AA959878; TR7; DR6
Mus musculus	RefSeq	ILMN_188593	ILMN_232345	STAR	NM_011485.4	NM_011485.4		20845	118130138	NM_011485.4	Star	NP_035615.2	ILMN_2703598	006110332	S	3780	GTCCTTGCATTAGTGGTTATCTAGCAGCTGGTAGGCTGTGACCCCAGCTT	8	+	26926227-26926276	8qA2	Mus musculus steroidogenic acute regulatory protein (Star), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 50810] [evidence IDA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IMP]; The chemical reactions and pathways involving glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 8211] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence IEA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]	D8Ertd419e; AV363654	D8Ertd419e; AV363654
Mus musculus	RefSeq	ILMN_197007	ILMN_317789	LOC545369	XR_034542.1	XR_034542.1		545369	149234324	XR_034542.1	LOC545369		ILMN_2526572	006110491	S	1218	AACCTGTGGATGCCAAGAAGCAGAAGCCTGCAGGGAAAAAGATGGTTGCC	1	-	144989976-144990025	1qF	PREDICTED: Mus musculus similar to ribosomal protein L4 (LOC545369), misc RNA.					
Mus musculus	RefSeq	ILMN_217657	ILMN_224562	4933413N12RIK	XR_001594.1	XR_001594.1		71138	94401861	XR_001594.1	4933413N12Rik		ILMN_2686008	007210193	S	543	GGCAACATACTCACTTACCATAGACGTATCTCTTTGGGAAGCGGAGACCG	17	-	29663181-29663230	17qA3.3	PREDICTED: Mus musculus RIKEN cDNA 4933413N12 gene (4933413N12Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_199560	ILMN_199560	LOC383645	XM_357170.1	XM_357170.1			38074311	XM_357170.1	LOC383645		ILMN_1258227	003450551	S	175	GGCGAAGTGCCTGCATCAAGTGCTGGGATCTTTTCCTGCTCAGATGGTTC										
Mus musculus	RefSeq	ILMN_221807	ILMN_221807	MICAL2	NM_177282.4	NM_177282.4		320878	142375548	NM_177282.4	Mical2	NP_796256.1	ILMN_1217875	005690470	S	3267	GCCAAAGAGTCCCACATTGGCCACTTCTGCCTGACTTTGACAGGGTTGAG	7	+	119495340-119495389	7qF1	Mus musculus microtubule associated monoxygenase, calponin and LIM domain containing 2 (Mical2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	KIAA0750; mKIAA0750; 9530064J02; 5330438E18Rik	KIAA0750; mKIAA0750; 9530064J02; 5330438E18Rik
Mus musculus	RefSeq	ILMN_186715	ILMN_330924	LOC100047132	XM_001477466.1	XM_001477466.1		100047132	149255612	XM_001477466.1	LOC100047132	XP_001477516.1	ILMN_1231284	002940167	S	46	CTGCTCTGGTTATATGGTGCTGATGGGAACATTGTAATGACCCAATCTCC					PREDICTED: Mus musculus similar to monoclonal antibody 17-1A, light chain (LOC100047132), mRNA.					
Mus musculus	RefSeq	ILMN_195028	ILMN_330924	LOC100047132	XM_001477466.1	XM_001477466.1		100047132	149255612	XM_001477466.1	LOC100047132	XP_001477516.1	ILMN_1218006	000520343	S	26	CTCTGGTCTTCATATCCATACTGCTCTGGTTATATGGTGCTGATGGGAAC					PREDICTED: Mus musculus similar to monoclonal antibody 17-1A, light chain (LOC100047132), mRNA.					
Mus musculus	RefSeq	ILMN_200035	ILMN_200035	LOC383154	XM_356900.1	XM_356900.1			38079955	XM_356900.1	LOC383154		ILMN_1245534	006380224	S	5907	GGCAGGCATGAATAAAGTTCTAAGGCAAGCAGCACCAGCTTCACCTGGCC										
Mus musculus	RefSeq	ILMN_201458	ILMN_201458	LOC385205	XM_358117.1	XM_358117.1			38093991	XM_358117.1	LOC385205		ILMN_1227305	003190047	S	126	GGTCTGCAGTATGAGGCCTCAGTTTGAGGCCATGTCTGAGGTTACCGTGC										
Mus musculus	Riken	ILMN_206933	ILMN_206933	D430024I10RIK	ri|D430024I10|PX00194I05|AK085011|1667					AK085011	D430024I10Rik		ILMN_1218011	000730131	S	1477	AGAAGAGATGGTCATTCTGCATAGGTGTTGGGGGCACCACCTTCTGTCAG										
Mus musculus	RefSeq	ILMN_220793	ILMN_220793	OLFR1044	NM_147011.1	NM_147011.1		259013	22128918	NM_147011.1	Olfr1044	NP_667222.1	ILMN_1227652	002470711	S	665	TTTCTGCTATCCTAAGGATGCGTTCCGCAGAGGGTAGACGCAAGGCTTTC	2	-	86011258-86011307	2qD	Mus musculus olfactory receptor 1044 (Olfr1044), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR185-4	MOR185-4
Mus musculus	RefSeq	ILMN_248183	ILMN_248183	OLFR55	NM_010998.1	NM_010998.1		18355	53828654	NM_010998.1	Olfr55	NP_035128.1	ILMN_2832802	003890709	S	522	CCACCATTTTACTTGTCATGTTCCACCTCTATTGAAGTTGGCATGTGGAG	1	+	684-733		Mus musculus olfactory receptor 55 (Olfr55), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-17; IF6; MOR267-20	MOR267-17; IF6; MOR267-20
Mus musculus	MEEBO	ILMN_214662	ILMN_214662	GDAP10	scl43301.1.2269_3	NM_010268.1			6753961	NM_010268.1	Gdap10		ILMN_2650502	004560674	S	4908	CATGTTGTGTTCATAGGTTAACAGTTCTCTTTCATGGTTAATTACCTGTC										
Mus musculus	Riken	ILMN_205839	ILMN_205839	A730010D24RIK	ri|A730010D24|PX00149E08|AK042608|2172					AK042608	A730010D24Rik		ILMN_2575614	003140541	S	1848	AAGACTGAAGTTTCCTGTGGACTGTGGAAAGGATGGCGGGAGGGTAGGGC										
Mus musculus	Riken	ILMN_205695	ILMN_205695	XRCC1	ri|B430205I06|PX00071B09|AK046611|1203					AK046611	Xrcc1		ILMN_2574538	001190278	S	964	GCACTCACCATGAGGCAGTTGACAAGTCTGAGCCTAAGCCAGTGAAGAAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The repair of single strand breaks in DNA. Repair of such breaks is mediated by the same enzyme systems as are used in base excision repair [goid 12] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]		
Mus musculus	Riken	ILMN_203463	ILMN_203463	4831437C03RIK	ri|4831437C03|PX00102P02|AK029240|5025					AK029240	4831437C03Rik		ILMN_2557496	005550202	S	4856	TATGCCACCACAGCATACCTTGCGAAGGTCAAGAACAAACAGCTTGCAGG										
Mus musculus	RefSeq	ILMN_195316	ILMN_231385	1500017I17RIK	XM_986727.1	XM_986727.1		68976	94389752	XM_986727.1	1500017I17Rik	XP_991821.1	ILMN_1239666	003120338	S	1074	CTGAGCTGCTTTCCAGGTGTTCCTAGTTCCTCTGGGACTTGTGTCTAGCC					PREDICTED: Mus musculus RIKEN cDNA 1500017I17 gene (1500017I17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_260111	ILMN_260111	HEMT1	NM_010416.2	NM_010416.2		15202	84662775	NM_010416.2	Hemt1	NP_034546.2	ILMN_3162214	004210408	S	58	CTCTGAAGGGACACAAAGGCAGGCCCCAAGATACAGTTAGAACCCTGAGG	15	+	74649563-74649611:74650978-74650978	15qD3	Mus musculus hematopoietic cell transcript 1 (Hemt1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HemT; 1700057K19Rik	HemT; 1700057K19Rik
Mus musculus	RefSeq	ILMN_212692	ILMN_212692	DCLK1	NM_019978.2	NM_019978.2		13175	118130532	NM_019978.2	Dclk1	NP_064362.1	ILMN_1217517	004780092	S	5261	CCCTGGAAATGTTCTGGCTGTCGTCTTCACCTGACTCACACGTGGTGTGT	3	+	55340502-55340551	3qC	Mus musculus doublecortin-like kinase 1 (Dclk1), mRNA.		The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Long distance growth of a single process [goid 48675] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IGI]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Dcamkl1; Cpg16; DCLK; CLICK-I; 2810480F11Rik; Dcl; 1700113D08Rik; mKIAA0369	Dcamkl1; Cpg16; DCLK; CLICK-I; 2810480F11Rik; Dcl; 1700113D08Rik; mKIAA0369
Mus musculus	Riken	ILMN_202049	ILMN_202049	NEK1	ri|2310022M10|ZX00059G11|AK009484|1515					AK009484	Nek1		ILMN_2546623	005720152	S	719	GTTCCTGAAGGCTGAGCAGATGAAGCGCAAGAGACAGCAGCGGTTGGAGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISA]		
Mus musculus	MEEBO	ILMN_186204	ILMN_186204	TCRG-V7	scl021641.1_199						Tcrg-V7		ILMN_2433508	001820719	S	20	TGAAGGCCCGGACAAGAGGTATAAATTTGTGCTTCGGAATGTGGAGGAGT										
Mus musculus	RefSeq	ILMN_199349	ILMN_199349	LOC386553	XM_359397.1	XM_359397.1			38097336	XM_359397.1	LOC386553		ILMN_2534929	004670475	S	229	GAGAAGGAGGAGGTGACCACTCGCGAGGTACGTGGGTCGGCACCGGGGAC										
Mus musculus	MEEBO	ILMN_216593	ILMN_216593	2310033K02RIK	scl18300.2.1_99	XM_149252.2			38075269	XM_149252.2	2310033K02Rik		ILMN_2672959	002140010	S	1889	GGAGAATACCAAGGGGAGGCCGGTGCGCACAGTGAGTAATTTGCTCTGTG										
Mus musculus	RefSeq	ILMN_223413	ILMN_238973	BC032203	XM_924235.3	XM_924235.3		210982	149269360	XM_924235.3	BC032203	XP_929328.3	ILMN_2763739	006940678	S	5913	CGGCTCCAAGGACGGTCACTCACTGTCAGTGTGGCGTGGCTTTATTTGCT				17qC	PREDICTED: Mus musculus cDNA sequence BC032203, transcript variant 4 (BC032203), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_187362	ILMN_231054	BC037156	XM_897089.3	XM_897089.3		494497	149253991	XM_897089.3	BC037156	XP_902182.1	ILMN_2494135	002060044	S	363	TGAACCACTTCCTTGAAGGATCAATATTCCTGTTAAGAGAGAAAAATAAA	5	+	88343129-88343178	5qE1	PREDICTED: Mus musculus cDNA sequence BC037156 (BC037156), mRNA.					
Mus musculus	Riken	ILMN_206338	ILMN_206338	D330037A04RIK	ri|D330037A04|PX00192H11|AK084734|1795					AK084734	D330037A04Rik		ILMN_2579368	000870253	S	1668	TAGCTTCTGTTCTTTGCCACGGAGCACCTCTCATTGTAAGAGGAACTGTG										
Mus musculus	RefSeq	ILMN_193574	ILMN_227188	A630001G21RIK	XM_919139.2	XM_919139.2		319997	94364033	XM_919139.2	A630001G21Rik	XP_924232.1	ILMN_2498455	003370445	S	1704	TACAAGGGAGCATTGGACCCGGAGCAAGCGTGTCTTCCACAACATCTGAC				1qC5	PREDICTED: Mus musculus RIKEN cDNA A630001G21 gene, transcript variant 7 (A630001G21Rik), mRNA.					
Mus musculus	MEEBO	ILMN_195545	ILMN_195545	5031434C07RIK	scl29648.1.1_254						5031434C07Rik		ILMN_2516546	004760307	S	11	CTCTCTGTAACCACCTTGACCAAGCTTAGGGAAACATTAGAATCACTGCC										
Mus musculus	MEEBO	ILMN_219131	ILMN_219131	SIAT7A	scl39296.9.175_28	NM_011371.1			6755509	NM_011371.1	Siat7a		ILMN_2704658	001850546	S	2056	GTGAGTAGACTGAACACATTCAAGGTACGGCAGGATTTCAGAGTGAGCCC										
Mus musculus	MEEBO	ILMN_219587	ILMN_219587	1700092K14RIK	scl40753.3.1_88	XM_147560.1			20913616	XM_147560.1	1700092K14Rik		ILMN_1259830	007330669	S	323	CAAGAATAAAATATTGAGCACAACCAGCAACCGCGAGACTGGAGGAGGCC										
Mus musculus	MEEBO	ILMN_184209	ILMN_184209	PAPSS2	scl6053.1.1_245				6754983	NM_011864	Papss2		ILMN_1253588	004610279	S	20	GCCCAGAGGATGGAGGCACTTGGGTTCATTATACAAAGTCAGAGGTCTCC							The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds [goid 103] [evidence IDA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: ATP + adenylylsulfate = ADP + 3'-phosphoadenosine 5'-phosphosulfate [goid 4020] [evidence IDA]; Catalysis of the reaction: ATP + SO4(2-) (sulfate) = diphosphate + adenylylsulfate [goid 4781] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209379	ILMN_209379	THEX1	NM_026067.2	NM_026067.2		67276	31541936	NM_026067.2	Thex1	NP_080343.3	ILMN_1248763	000460730	S	4925	CAGGTAAGTGCTACCTACCATGCCAATGATGTGACTTGTAGCATAGGAAT	8	-	36528359-36528408	8qA4	Mus musculus three prime histone mRNA exonuclease 1 (Thex1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	3'hexo; 3110010F15Rik	3'hexo; 3110010F15Rik
Mus musculus	RefSeq	ILMN_200807	ILMN_200807	LOC384590	XM_357731.1	XM_357731.1			38086272	XM_357731.1	LOC384590		ILMN_1215932	005690521	S	1	ATGAAGCTTGCTGGTGCTGTGGTGATCCTCGGGGCTGCCCTGCTCCTCCT										
Mus musculus	RefSeq	ILMN_259887	ILMN_259887	OLFR234	NM_001001807.1	NM_001001807.1		258502	49227366	NM_001001807.1	Olfr234	NP_001001807.1	ILMN_3163554	001850309	A	879	CAAGAATCAAGAGGTCAAATGGGCTCTCCGTAGGCTCTGCAGGCAGCTCC	15	+	98328783-98328832	15qF1	Mus musculus olfactory receptor 234 (Olfr234), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR122-1; Olfr234-ps1	MOR122-1; Olfr234-ps1
Mus musculus	RefSeq	ILMN_259887	ILMN_259887	OLFR234	NM_001001807.1	NM_001001807.1		258502	49227366	NM_001001807.1	Olfr234	NP_001001807.1	ILMN_3068120	003190156	I	28	ACCTGGCTGACCCTCGTGGGCTTCGGGAAGCTGAAACACCTGGGCTTCCT	15	+	98327932-98327981	15qF1	Mus musculus olfactory receptor 234 (Olfr234), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR122-1; Olfr234-ps1	MOR122-1; Olfr234-ps1
Mus musculus	RefSeq	ILMN_211791	ILMN_211791	AKR1C6	NM_030611.3	NM_030611.3		83702	142368094	NM_030611.3	Akr1c6	NP_085114.1	ILMN_2619565	003710114	S	1052	GTCACTGCATTGGAAGAGTGTATAGGAAGAGTATTCTCAAAATGTGATGA	13	+	4456469-4456518	13qA1	Mus musculus aldo-keto reductase family 1, member C6 (Akr1c6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IDA]	3alpha-HSD; Akr1c1; Hsd17b5	3alpha-HSD; Akr1c1; Hsd17b5
Mus musculus	MEEBO	ILMN_194779	ILMN_194779	9030624J02RIK	scl32142.34_423				47271399	NM_027815	9030624J02Rik		ILMN_1221487	001660537	S	15	GCCTTTCCTCCTGCTGTGAACATGCCAGAACCCAGAATGCACTATGGTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_194779	ILMN_194779	9030624J02RIK	scl32142.34_423				47271399	NM_027815	9030624J02Rik		ILMN_2702296	001850131	S	1390	GCGATGGCTTTGTTGACACCCTGCACCATGTCTGGGTTTACTCTGCTTCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_195422	ILMN_195422	CHD9	scl077692.4_12				51764254	XM_284439	Chd9		ILMN_1226311	004040671	S	14	CCTCTGAAGTCTCCCCCAGTTAGCACTGCATTATCCTCTTATTTAACCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195422	ILMN_195422	CHD9	scl077692.4_12				51764254	XM_284439	Chd9		ILMN_1235114	006290731	S	10726	CAGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATACCACCCGCAGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214048	ILMN_323201	A730092B10	XM_001478219.1	XM_001478219.1		328953	149270078	XM_001478219.1	A730092B10	XP_001478269.1	ILMN_1256801	003780482	S	543	CTGTAGAGGTTTTTCATCACAGAAACTGGGGCTGCCTATGAACCTGCTGC				18qC	PREDICTED: Mus musculus hypothetical protein A730092B10 (A730092B10), mRNA.					
Mus musculus	RefSeq	ILMN_199153	ILMN_226588	GARNL4	NM_001015046.2	NM_001015046.2		380711	116517293	NM_001015046.2	Garnl4	NP_001015046.1	ILMN_1244477	007510040	S	1734	CTCAGCGGGGGCATTGTCCACAACAGCATGGAGGTCACCAAGACCACCTT	11	-	74210862-74210911	11qB5	Mus musculus GTPase activating RANGAP domain-like 4 (Garnl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AU067654; mKIAA1039; MGC130388; RP23-20M18.15; Gm1561	AU067654; mKIAA1039; MGC130388; RP23-20M18.15; Gm1561
Mus musculus	RefSeq	ILMN_199152	ILMN_226588	GARNL4	NM_001015046.2	NM_001015046.2		380711	116517293	NM_001015046.2	Garnl4	NP_001015046.1	ILMN_2534233	006110162	S	1961	CTCCTGAGAAGAGTGTCCGCCATCTGGGGTTTTGGGGGTGCTGGAGGCAC	11	-	74206880-74206929	11qB5	Mus musculus GTPase activating RANGAP domain-like 4 (Garnl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AU067654; mKIAA1039; MGC130388; RP23-20M18.15; Gm1561	AU067654; mKIAA1039; MGC130388; RP23-20M18.15; Gm1561
Mus musculus	RefSeq	ILMN_226588	ILMN_226588	GARNL4	NM_001015046.2	NM_001015046.2		380711	116517293	NM_001015046.2	Garnl4	NP_001015046.1	ILMN_2940713	001440040	S	5975	CGGATAGTGCGCTTGGCTGCAAGACTGGAATCAGTTGCCATTGTCTTTGG	11	-	74197370-74197419	11qB5	Mus musculus GTPase activating RANGAP domain-like 4 (Garnl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AU067654; mKIAA1039; MGC130388; RP23-20M18.15; Gm1561	AU067654; mKIAA1039; MGC130388; RP23-20M18.15; Gm1561
Mus musculus	RefSeq	ILMN_209963	ILMN_209963	PRSS27	NM_175440.4	NM_175440.4		213171	146198712	NM_175440.4	Prss27	NP_780649.1	ILMN_2600883	006900209	S	833	GCCCGTCGGAATCGCCCAGGTGTCTACATCCGTGTGACTTCTCATCACAA				17qA3.3	Mus musculus protease, serine 27 (Prss27), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	CAPH2; Mpn; marapsin	CAPH2; Mpn; marapsin
Mus musculus	RefSeq	ILMN_191585	ILMN_250095	2900056M20RIK	XM_898625.2	XM_898625.2		72997	94408435	XM_898625.2	2900056M20Rik	XP_903718.1	ILMN_2480382	000630326	S	205	GCATCTCGTCATTAAACCATTGATCGTTGAGACTTCTTTCAAGTATGAGG	X	-	148749901-148749950	XqF3	PREDICTED: Mus musculus RIKEN cDNA 2900056M20 gene (2900056M20Rik), mRNA.					
Mus musculus	Riken	ILMN_202057	ILMN_202057	2610103N14RIK	ri|2610103N14|ZX00061E13|AK011813|1307					AK011813	2610103N14Rik		ILMN_1224202	002650296	S	1118	CCCAGGGAGTTTATCTTCCCCTGAGTGCGCCCATCGTGCTAAGGAGTAAG										
Mus musculus	RefSeq	ILMN_258281	ILMN_258281	PLEKHG5	NM_001004156.2	NM_001004156.2		269608	118131086	NM_001004156.2	Plekhg5	NP_001004156.1	ILMN_2812215	006020327	S	3764	GCGCCAGGCAGGGTGGTTGCCTCATCACCTCATGGCCAATTTGCACTTTG	4	+	151489160-151489209	4qE2	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (Plekhg5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0720; BC023181	mKIAA0720; BC023181
Mus musculus	RefSeq	ILMN_211982	ILMN_258281	PLEKHG5	NM_001004156.2	NM_001004156.2		269608	118131086	NM_001004156.2	Plekhg5	NP_001004156.1	ILMN_1242125	005900020	S	3797	GGCCAATTTGCACTTTGCCAGACTGGATGGAATAGAGAAGGGTCCTGTGG	4	+	151489193-151489242	4qE2	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (Plekhg5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0720; BC023181	mKIAA0720; BC023181
Mus musculus	RefSeq	ILMN_196651	ILMN_258281	PLEKHG5	NM_001004156.2	NM_001004156.2		269608	118131086	NM_001004156.2	Plekhg5	NP_001004156.1	ILMN_1253661	005900064	S	3125	CTGCCCGAAGGAGATGCAGAGAGATGCCTTCTGGGACTATGTCCAGGGTG	4	+	151488521-151488570	4qE2	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (Plekhg5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0720; BC023181	mKIAA0720; BC023181
Mus musculus	Riken	ILMN_207188	ILMN_207188	7330438C15RIK	ri|7330438C15|PX00650L17|AK078653|2613					AK078653	7330438C15Rik		ILMN_2585708	003450044	S	2115	CAGTTGAGGTTCTCTCTTCCCAGGTGACCCTAGTTTTTGTCGCATTGATG										
Mus musculus	Riken	ILMN_206371	ILMN_206371	5730526A15RIK	ri|5730526A15|PX00006I03|AK077693|2079					AK077693	5730526A15Rik		ILMN_1233039	005260500	S	2000	TCTACAGACTGTAAAACTTGTCAGATTCAATATAAACTCAAATTTGGTTA										
Mus musculus	RefSeq	ILMN_188922	ILMN_188922	TMEM35	NM_026239.2	NM_026239.2		67564	31982652	NM_026239.2	Tmem35	NP_080515.1	ILMN_2892650	000840689	S	1400	CCATTCTCAGTAGCCACCCAGGAGCTGAAGTTTCCCCACTGCTTCCACTG	X	+	130839990-130840039	XqE3	Mus musculus transmembrane protein 35 (Tmem35), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9030603L14Rik; AI841526	9030603L14Rik; AI841526
Mus musculus	Riken	ILMN_202949	ILMN_202949	A930013B10RIK	ri|A930013B10|PX00066E23|AK044435|1963					AK044435	A930013B10Rik		ILMN_1251395	006220148	S	1639	GCTGCTCAGGTCCCCCGTCACTGTAGACTCGGTTTGAACACAAGCATGCG										
Mus musculus	MEEBO	ILMN_185287	ILMN_185287	TRBV13-1_M15618_T_CELL_RECEPTOR_BETA_VARIABLE_13-1_213	TRBV13-1_M15618_T_cell_receptor_beta_variable_13-1_213						TRBV13-1_M15618_T_cell_receptor_beta_variable_13-1_213		ILMN_1215939	001710408	S	2	GCTGGCAACCTTCGAATAGGAGATGTCCCTGATGGGTACAAGGCCACCAG										
Mus musculus	Riken	ILMN_205590	ILMN_205590	C630016N16RIK	ri|C630016N16|PX00084A01|AK049951|1276					AK049951	C630016N16Rik		ILMN_2573723	005820747	S	1025	TCATGAGGGTGTCTGGATTCTGACGTCTGGAGTAGGTGGGGTCTGCAGTC										
Mus musculus	RefSeq	ILMN_208919	ILMN_208919	KBTBD4	NM_025991.1	NM_025991.1		67136	13385495	NM_025991.1	Kbtbd4	NP_080267.1	ILMN_2806291	007380307	S	2018	CCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATAGCCAGCCGAGTG	2	+	90711024-90711073	2qE1	Mus musculus kelch repeat and BTB (POZ) domain containing 4 (Kbtbd4), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2510026C23Rik	2510026C23Rik
Mus musculus	RefSeq	ILMN_208919	ILMN_208919	KBTBD4	NM_025991.1	NM_025991.1		67136	13385495	NM_025991.1	Kbtbd4	NP_080267.1	ILMN_2806290	000990639	S	1946	GAGCCAGCCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTG	2	+	90710952-90711001	2qE1	Mus musculus kelch repeat and BTB (POZ) domain containing 4 (Kbtbd4), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2510026C23Rik	2510026C23Rik
Mus musculus	RefSeq	ILMN_216296	ILMN_216296	BC034076	NM_177649.3	NM_177649.3		227712	31982240	NM_177649.3	BC034076	NP_808317.2	ILMN_2971177	005670612	S	2576	CTCGCAGAGAGGAACAGAGTGGCCCTTGCCCATGACACCTACAGTGACAG	2	+	31315941-31315990	2qB	Mus musculus cDNA sequence BC034076 (BC034076), mRNA.				MGC31312; MGC49669; D030068H01	MGC31312; MGC49669; D030068H01
Mus musculus	Riken	ILMN_206861	ILMN_206861	SLC12A1	ri|D630029H06|PX00197O16|AK085455|3459					AK085455	Slc12a1		ILMN_2583228	001340603	S	3259	TTACTCTCTGAGCTGCAGGGGGGCCCAGCTCTCTACTAGGACTTCCAGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]		
Mus musculus	Riken	ILMN_202718	ILMN_202718	0610010I05RIK	ri|0610010I05|R000002G18|AK018737|135					AK018737	0610010I05Rik		ILMN_2551741	003990427	S	82	AAACACATCAACTTCCCACTGTACACCACCACATCAATCAAATTCTCCTT										
Mus musculus	RefSeq	ILMN_214731	ILMN_214731	FSCN3	NM_019569.2	NM_019569.2		56223	31982709	NM_019569.2	Fscn3	NP_062515.2	ILMN_2999177	004120647	S	1645	CCTCCAGGAACAACCTCTGAACTAAACAGGGCAGGAGCCCCAGAGTCACG	6	+	28388477-28388526	6qA3.3	Mus musculus fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus) (Fscn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence TAS]	Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISA]		
Mus musculus	RefSeq	ILMN_219854	ILMN_219854	FANK1	NM_025850.2	NM_025850.2		66930	31982667	NM_025850.2	Fank1	NP_080126.1	ILMN_2977849	004230554	S	1880	GGACCAAGCTTAAACATCAGCAGAAACATGTGCATCTTGTGTTTCCAGGG	7	+	141073121-141073170	7qF3	Mus musculus fibronectin type 3 and ankyrin repeat domains 1 (Fank1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AI850911; 1700007B22Rik	AI850911; 1700007B22Rik
Mus musculus	RefSeq	ILMN_219854	ILMN_219854	FANK1	NM_025850.2	NM_025850.2		66930	31982667	NM_025850.2	Fank1	NP_080126.1	ILMN_1212683	006420431	S	1207	ATTTAGTTGAAGATTCACAGTGACTTTTATGTAATGGGCAACTCTTCCCA	7	+	141072448-141072497	7qF3	Mus musculus fibronectin type 3 and ankyrin repeat domains 1 (Fank1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AI850911; 1700007B22Rik	AI850911; 1700007B22Rik
Mus musculus	RefSeq	ILMN_199975	ILMN_199975	LOC381607	XM_355563.1	XM_355563.1			38079402	XM_355563.1	LOC381607		ILMN_1231073	006520441	S	401	AACCACCGCAGGCTTATTCAGTGCTTTCCCCCGAGGTCAGTGCCTTCCAG										
Mus musculus	RefSeq	ILMN_197065	ILMN_197065	LOC380785	XM_354696.1	XM_354696.1			38073740	XM_354696.1	LOC380785		ILMN_2526779	005890037	S	1622	TGAGCCGTAAGGACAGTCTCACTAAAGCCCAGCTCTACGGTACCCTGCTC										
Mus musculus	RefSeq	ILMN_227312	ILMN_227312	SELENBP2	NM_019414.2	NM_019414.2		20342	118130755	NM_019414.2	Selenbp2	NP_062287.1	ILMN_2939652	004920725	S	1482	TGCAGTTCTGATATCTGGATCTGAAGGCTCACACTAGGGGCCCCCCTCCA	3	+	94508115-94508138:94508139-94508164	3qF2.1	Mus musculus selenium binding protein 2 (Selenbp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	AP56; Lpsb2	AP56; Lpsb2
Mus musculus	RefSeq	ILMN_209687	ILMN_253395	PSAT1	NM_177420.1	NM_177420.1		107272	54292131	NM_177420.1	Psat1	NP_803155.1	ILMN_1221048	002260010	S	1759	CTAATGAAACAGTTTTGTTCAGCCCATGACTTTGTGCATGACTGTCGTCC	19	-	15979942-15979991	19qA	Mus musculus phosphoserine aminotransferase 1 (Psat1), mRNA.		The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6564] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: O-phospho-L-serine + 2-oxoglutarate = 3-phosphonooxypyruvate + L-glutamate [goid 4648] [evidence IEA]	AL024083; PSA; D8Ertd814e; EPIP; Psat; AL024078; AU040266	AL024083; PSA; D8Ertd814e; EPIP; Psat; AL024078; AU040266
Mus musculus	Riken	ILMN_202634	ILMN_202634	9330132O05RIK	ri|9330132O05|PX00104P12|AK020369|855					AK020369	9330132O05Rik		ILMN_1227510	000430128	S	593	GAGTGCCTTGGTAGACGCTCTGGTGAGAGGGCAGGAAGACTTGGGTTTTG										
Mus musculus	RefSeq	ILMN_192591	ILMN_259633	RNF214	NM_178709.4	NM_178709.4		235315	146198733	NM_178709.4	Rnf214	NP_848824.1	ILMN_2642886	003170364	S	3612	CCATCTGGAGGAAGATAGGTTTGCCACCGCCACTTACTGAGTTCTTCTGG				9qA5.2	Mus musculus ring finger protein 214 (Rnf214), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D130054N24Rik	D130054N24Rik
Mus musculus	MEEBO	ILMN_193961	ILMN_193961	AA517853	scl36895.9_299				24418912	NM_153799	AA517853		ILMN_2502053	005360634	S	12	TCCTTTCATGCTCAGAACTTAGGCTACTGGGTGGGATCTTGCTGGGTTGG										
Mus musculus	RefSeq	ILMN_215512	ILMN_215512	DHCR7	NM_007856.2	NM_007856.2		13360	42544247	NM_007856.2	Dhcr7	NP_031882.1	ILMN_2660471	004280112	S	2324	GGCTCCATTTTTGTCTGTAGCATGTGCAGTGTTAATTGATCAGCCAAGGG	7	+	151033823-151033872	7qF5	Mus musculus 7-dehydrocholesterol reductase (Dhcr7), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: cholesterol + NADP+ = cholesta-5,7-dien-3-beta-ol + NADPH + H+ [goid 47598] [evidence IDA]	AA409147	AA409147
Mus musculus	RefSeq	ILMN_216943	ILMN_216943	IQCF4	NM_026090.2	NM_026090.2		67320	54020726	NM_026090.2	Iqcf4	NP_080366.2	ILMN_2677261	005960440	S	497	GGGTCCGGATGCTGAAAATCCGTCAGAATTATTGCAGGTTGTGCTATGCC	9	-	106470830-106470879	9qF1	Mus musculus IQ motif containing F4 (Iqcf4), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1700042N06Rik	1700042N06Rik
Mus musculus	RefSeq	ILMN_221038	ILMN_221038	DICER1	NM_148948.2	NM_148948.2		192119	117168270	NM_148948.2	Dicer1	NP_683750.2	ILMN_1215331	000990500	S	5405	GGCAGCATTCTCCAGGGGTCTTGACTGACTTGCGCTCTGCCCTTGTCAAT	12	-	105932828-105932877	12qE	Mus musculus Dicer1, Dcr-1 homolog (Drosophila) (Dicer1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IDA]; Cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides [goid 30422] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; Cleavage of stem-loop RNA precursors into microRNAs (miRNAs), a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein [goid 35196] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt [goid 4525] [evidence IDA]; Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt [goid 4525] [evidence ISA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mKIAA0928; 1110006F08Rik; D12Ertd7e	mKIAA0928; 1110006F08Rik; D12Ertd7e
Mus musculus	RefSeq	ILMN_191906	ILMN_221038	DICER1	NM_148948.2	NM_148948.2		192119	117168270	NM_148948.2	Dicer1	NP_683750.2	ILMN_2483253	004850059	S	9633	GGGAAATGACTAACGGAGTCAGGCTGAGTGTTCTGCCGACAAGAAACGGA	12	-	105926120-105926169	12qE	Mus musculus Dicer1, Dcr-1 homolog (Drosophila) (Dicer1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IDA]; Cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides [goid 30422] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; Cleavage of stem-loop RNA precursors into microRNAs (miRNAs), a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein [goid 35196] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt [goid 4525] [evidence IDA]; Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt [goid 4525] [evidence ISA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mKIAA0928; 1110006F08Rik; D12Ertd7e	mKIAA0928; 1110006F08Rik; D12Ertd7e
Mus musculus	MEEBO	ILMN_218110	ILMN_218110	PIN4	scl069713.3_39				51772253	XM_135990	Pin4		ILMN_1242508	005360615	S	217	AGCCATGGAAAAGTTAAAGTCTGGGATGAGATTCAGTGAAGTGGCCACAC							The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220880	ILMN_234643	CDA	NM_028176.1	NM_028176.1		72269	58037288	NM_028176.1	Cda	NP_082452.1	ILMN_2728088	002350066	S	214	CGGACTGCCATCCAGAAGGCCATCTCCGAAGGGTACAAGGATTTCAGGGC	4	-	137907113-137907162	4qD3	Mus musculus cytidine deaminase (Cda), mRNA.		The chemical reactions and pathways involving cytidine, cytosine riboside, a widely distributed nucleoside [goid 46087] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: cytidine + H2O = uridine + NH3 [goid 4126] [evidence IEA]	2210401N16Rik; MGC67370	2210401N16Rik; MGC67370
Mus musculus	Riken	ILMN_204359	ILMN_204359	C430016J18RIK	ri|C430016J18|PX00078H15|AK049487|1363					AK049487	C430016J18Rik		ILMN_1235467	006900474	S	1013	ATGTGCTAATCATCCATGTCAGAACTCTGCCCAGACTTTATAAGGGGGGT										
Mus musculus	MEEBO	ILMN_215901	ILMN_215901	NRP2	scl0018187.1_216	NM_010939.1			33469110	NM_010939.1	Nrp2		ILMN_2664954	004610097	S	4538	TTATATCTTGGATAGACAAAAGTAATGACAAAAAATTGCTGGTGTGTATA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 17154] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199450	ILMN_199450	LOC383487	XM_357089.1	XM_357089.1			38049384	XM_357089.1	LOC383487		ILMN_1218719	003460112	S	558	CTTGACTCCACAGACAGAAGAAGTCTTGGCGCTGGTCTTCAAGGTGTACC										
Mus musculus	RefSeq	ILMN_210685	ILMN_210685	TMEM143	NM_144801.1	NM_144801.1		70209	21450160	NM_144801.1	Tmem143	NP_659050.1	ILMN_2803344	001090739	S	1815	TTTAACCTGCGCAGAACTGCTCGCCACAGGCACCTGAGCCATTTGCCCCT	7	+	53172435-53172484	7qB4	Mus musculus transmembrane protein 143 (Tmem143), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2310076O21Rik; AI481604	2310076O21Rik; AI481604
Mus musculus	RefSeq	ILMN_210685	ILMN_210685	TMEM143	NM_144801.1	NM_144801.1		70209	21450160	NM_144801.1	Tmem143	NP_659050.1	ILMN_2731260	001170196	S	1926	GAGGAACCTCTTCAGACCCCACGTAAGATGAGCCATCTGTTCTGCAGCTC	7	+	53172546-53172595	7qB4	Mus musculus transmembrane protein 143 (Tmem143), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2310076O21Rik; AI481604	2310076O21Rik; AI481604
Mus musculus	RefSeq	ILMN_210685	ILMN_210685	TMEM143	NM_144801.1	NM_144801.1		70209	21450160	NM_144801.1	Tmem143	NP_659050.1	ILMN_2675595	002060477	S	1201	TCTGGCCCAATCAGGCTGTGATGTAACCTTCAATGGACCTCGGGCCCTGG	7	+	53171821-53171870	7qB4	Mus musculus transmembrane protein 143 (Tmem143), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2310076O21Rik; AI481604	2310076O21Rik; AI481604
Mus musculus	RefSeq	ILMN_210685	ILMN_210685	TMEM143	NM_144801.1	NM_144801.1		70209	21450160	NM_144801.1	Tmem143	NP_659050.1	ILMN_2608174	004180100	S	283	GAGAGCAGCTTTGGAGGCATTCTCAGCTCACGTGGACTTCTGTACCCTCT	7	+	53155025-53155074	7qB4	Mus musculus transmembrane protein 143 (Tmem143), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2310076O21Rik; AI481604	2310076O21Rik; AI481604
Mus musculus	RefSeq	ILMN_200660	ILMN_200660	LOC381793	XM_355794.1	XM_355794.1			38084943	XM_355794.1	LOC381793		ILMN_1221167	005310180	S	450	GAGGCCACAGCCAGGAGACACGGTAGGATTCGCCAATGATCAGATAGCAG										
Mus musculus	Riken	ILMN_205077	ILMN_205077	RPS24	ri|D430033K08|PX00195C06|AK052480|4063					AK052480	Rps24		ILMN_1214875	002000315	S	3449	GGAACTGGTAATCAGGGAAGGTGCTGTCAGAAGTGGGTGCTGTGCAAGGA						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISO]		
Mus musculus	MEEBO	ILMN_213284	ILMN_213284	TAPBP	scl0021356.1_24	NM_009318.1			6678218	NM_009318.1	Tapbp		ILMN_1226819	000020358	S	1036	TTGAGGGGAAGACGTGGCTCTCCACCATCCGCCACCATTCCGATGGCTCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded [goid 50823] [evidence IMP]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class I molecule. Class I here refers to classical class I molecules [goid 2479] [evidence IDA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]			
Mus musculus	RefSeq	ILMN_221092	ILMN_221092	SULT5A1	NM_020564.1	NM_020564.1		57429	10181191	NM_020564.1	Sult5a1	NP_065589.1	ILMN_2922178	003990746	S	753	GCAGCTTTTCCTTCATGAGTCAGAGCAACATAGTCAACTACAGCCTGCTG	8	-	126031477-126031526	8qE1	Mus musculus sulfotransferase family 5A, member 1 (Sult5a1), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Sult-x1; Sultx1	Sult-x1; Sultx1
Mus musculus	RefSeq	ILMN_223467	ILMN_223467	CCT3	NM_009836.1	NM_009836.1		12462	6753319	NM_009836.1	Cct3	NP_033966.1	ILMN_2931411	002750500	S	1629	GTAGAGACTGCAGTTCTGCTTCTGCGGATTGATGACATTGTCTCTGGCCA	3	+	88125062-88125067:88125366-88125409	3qF1	Mus musculus chaperonin containing Tcp1, subunit 3 (gamma) (Cct3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	AL024092; Cctg; Tcp1-rs3; TriC-P5	AL024092; Cctg; Tcp1-rs3; TriC-P5
Mus musculus	RefSeq	ILMN_223467	ILMN_223467	CCT3	NM_009836.1	NM_009836.1		12462	6753319	NM_009836.1	Cct3	NP_033966.1	ILMN_1247317	004780154	S	905	GCAGATGGAGGAGGAGTACATCCATCAGCTGTGTGAGGACATCATCCAGC	3	+	88117208-88117257	3qF1	Mus musculus chaperonin containing Tcp1, subunit 3 (gamma) (Cct3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	AL024092; Cctg; Tcp1-rs3; TriC-P5	AL024092; Cctg; Tcp1-rs3; TriC-P5
Mus musculus	MEEBO	ILMN_187529	ILMN_187529	4930556A17RIK	scl23250.1.319_119						4930556A17Rik		ILMN_2444906	005960670	S	4	AGGTCTCCGGGATGTATCGTTAACAGCATTCAAGGGGGACCTTGGGGCGT										
Mus musculus	RefSeq	ILMN_196062	ILMN_240108	4930481F22RIK	NM_001048145.1	NM_001048145.1		668110	114326484	NM_001048145.1	4930481F22Rik	NP_001041610.1	ILMN_2521283	000610468	S	411	ACAACTGGAGGAGAGGCTGGCGGATCTGGCAAGGCAACACAAGGACCTCT	8	+	116177944-116177993	8qE1	Mus musculus RIKEN cDNA 4930481F22 gene (4930481F22Rik), transcript variant 1, mRNA.		Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]		MMRP; PSESS	MMRP; PSESS
Mus musculus	RefSeq	ILMN_200340	ILMN_200340	LOC386268	XM_359148.1	XM_359148.1			38081352	XM_359148.1	LOC386268		ILMN_1222988	004120221	S	66	CAGCATTCCCATGCCACCTAGTCCTGGGCAACCCAACACAACCCAAAAGC										
Mus musculus	RefSeq	ILMN_223992	ILMN_254690	HOXC9	NM_008272.3	NM_008272.3		15427	118130863	NM_008272.3	Hoxc9	NP_032298.1	ILMN_2772764	003400368	S	1649	GGAGGAGGCAGGAGAGAAACTGCGTTCTCTTCCCCAGCGCAACTGAAATA	15	+	102814805-102814854	15qF3	Mus musculus homeo box C9 (Hoxc9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	Hox-3.2	Hox-3.2
Mus musculus	RefSeq	ILMN_184855	ILMN_314700	LOC100040851	XM_001475247.1	XM_001475247.1		100040851	149260684	XM_001475247.1	LOC100040851	XP_001475297.1	ILMN_2422147	007610681	S	1125	GCAATTCTGCAAGGGACCAAAGCGCCCACTCTGGCTGAAGATCAAGTCAG	10	+	25799185-25799234	10qA4	PREDICTED: Mus musculus hypothetical protein LOC100040851 (LOC100040851), mRNA.					
Mus musculus	Riken	ILMN_205396	ILMN_205396	IL18RAP	ri|E030025K24|PX00206C11|AK053176|2448					AK053176	Il18rap		ILMN_2572235	002030082	S	2085	CAGGCTTTTGTTTGGAGGAATGTGGCTTTTGGGACTTTGGAAGGCAGTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211888	ILMN_211888	MKL2	NM_181860.1	NM_181860.1		239719	32469512	NM_181860.1	Mkl2	NP_862908.1	ILMN_2917139	003450274	S	393	CCTGCCAGGTGTTTGGATGGTTGACAAGCTGCAGACTGGGAAGTTGATAG	16	+	13332780-13332803:13332804-13332829	16qA1	Mus musculus MKL/myocardin-like 2 (Mkl2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	MGC41582	MGC41582
Mus musculus	RefSeq	ILMN_211888	ILMN_211888	MKL2	NM_181860.1	NM_181860.1		239719	32469512	NM_181860.1	Mkl2	NP_862908.1	ILMN_2917138	004180070	S	453	AGAACACTACCTGGAATAGACGCCTCCTCCTGACAGGGCAACTGTGCTGC	16	+	13332840-13332889	16qA1	Mus musculus MKL/myocardin-like 2 (Mkl2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	MGC41582	MGC41582
Mus musculus	MEEBO	ILMN_221326	ILMN_221326	PRRX2	scl21082.4.1_25	XM_149096.1			20823828	XM_149096.1	Prrx2		ILMN_2734036	005080736	S	507	TGCCATGCTGGCTACCCGCTCTGCCTCGTTGCTCAAGTCTTATGGCCAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IGI]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IGI]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197838	ILMN_197838	LOC236251	XM_135581.1	XM_135581.1			20973908	XM_135581.1	LOC236251		ILMN_2529544	001690504	S	495	AAGAGCCTCTGCTCTCAACTGATGAGCTTATATCCAGGCCCAACTTACAC										
Mus musculus	Riken	ILMN_205587	ILMN_205587	B430219L17RIK	ri|B430219L17|PX00071J20|AK046648|1649					AK046648	B430219L17Rik		ILMN_1233893	006330500	S	1457	GCACTTGCTGCCAAGACTGAGGACAGAAGGACAGGAGTTCTAGTGCCGAG										
Mus musculus	RefSeq	ILMN_245187	ILMN_245187	FOXB1	NM_022378.2	NM_022378.2		64290	31340606	NM_022378.2	Foxb1	NP_071773.1	ILMN_2955351	005550524	S	1973	CAGAAGCTCCCTTAGCTGGGAGTGAGGAGGGAGGCTGCTAAAACTCCGGA	9	-	69606365-69606414	9qD	Mus musculus forkhead box B1 (Foxb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Foxb1a; Mf3; Hfh-e5.1; MGC130499; Fkh5; C43; Foxb1b; Twh	Foxb1a; Mf3; Hfh-e5.1; MGC130499; Fkh5; C43; Foxb1b; Twh
Mus musculus	RefSeq	ILMN_216744	ILMN_326692	LOC666979	XR_033873.1	XR_033873.1		666979	149264363	XR_033873.1	LOC666979		ILMN_2674763	007200367	S	1750	TAAATGTATTCATTCTTTAATTTATGTAAGGTTTTTTGTACTCAATTCTT	13	+	81205355-81205404	13qC3	PREDICTED: Mus musculus similar to gamma actin-like protein (LOC666979), misc RNA.					
Mus musculus	RefSeq	ILMN_218247	ILMN_218247	NUP107	NM_134010.2	NM_134010.2		103468	142371216	NM_134010.2	Nup107	NP_598771.1	ILMN_2693535	007040035	S	2678	CTTCACACCATACTGCACAGCACCGGACAGTACCAGGAGTGCCTGCAGCT	10	-	117188415-117188464	10qD2	Mus musculus nucleoporin 107 (Nup107), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		AW541137; C76801	AW541137; C76801
Mus musculus	RefSeq	ILMN_222910	ILMN_222910	TMEM40	NM_144805.1	NM_144805.1		94346	21450166	NM_144805.1	Tmem40	NP_659054.1	ILMN_2756632	007650161	S	855	TGTCGGCACCAGTGGGCAGGCTCTTGCTCTGCAGATTAACACGCAGTCTC	6	-	115679488-115679537	6qE3	Mus musculus transmembrane protein 40 (Tmem40), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AV091463; 9030407H20Rik; W64236	AV091463; 9030407H20Rik; W64236
Mus musculus	MEEBO	ILMN_190963	ILMN_190963	V1RC5	scl00113862.1_323	NM_053235.1			16716552	NM_053235.1	V1rc5		ILMN_2474839	002190398	S	19	TAAGTTCAGATAAGAGAGTAATCAATGTGATGAAAACCTTGCAGTCAAAA							The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]		
Mus musculus	RefSeq	ILMN_209165	ILMN_209165	9030224M15RIK	NM_177793.3	NM_177793.3		327747	142371642	NM_177793.3	9030224M15Rik	NP_808461.1	ILMN_1255780	007650278	S	1209	CCTTCCAGTCATGGAGTTACGTCTCCAGTCTCCCCCGGCTTGTCACTTGC	10	+	40530569-40530618	10qB1	Mus musculus RIKEN cDNA 9030224M15 gene (9030224M15Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	Riken	ILMN_202164	ILMN_202164	DLD	ri|3110029G23|ZX00071I01|AK014092|1175					AK014092	Dld		ILMN_1260206	005960148	S	541	GAACCCAGGTCCCTTGGAAGAGTGGCTACTTCTCTTAACCAACTGAGCCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction [goid 43159] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IDA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+ [goid 4148] [evidence IMP]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	MEEBO	ILMN_218328	ILMN_218328	1110033K02RIK	scl0381921.2_8				51761972	XM_355941	1110033K02Rik		ILMN_2694430	001470100	S	5966	CAGGGGTCTTGCAGTCAGGGTGCCTGAGTCTCACCATTCTCCTATTGCTG										
Mus musculus	MEEBO	ILMN_218328	ILMN_218328	1110033K02RIK	scl0381921.2_8				51761972	XM_355941	1110033K02Rik		ILMN_2714928	006250703	S	143	CCGGAACAGTGAGGTGGTGGCCATCAAGAAGATGTCCTATAGTGGGAAGC										
Mus musculus	RefSeq	ILMN_223874	ILMN_310122	HIATL1	NM_001083901.1	NM_001083901.1		66631	142370885	NM_001083901.1	Hiatl1	NP_001077370.1	ILMN_2770839	006370608	S	2936	ATAGTAAATGGACTATTAATTTGGGTCTATCTTCAACAAAGTACTCCTTT	13	-	65166727-65166776	13qB3	Mus musculus hippocampus abundant transcript-like 1 (Hiatl1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]	AW539692; AU045608; 5730414C17Rik	AW539692; AU045608; 5730414C17Rik
Mus musculus	RefSeq	ILMN_217766	ILMN_217766	PLEKHA3	NM_031256.2	NM_031256.2		83435	31560020	NM_031256.2	Plekha3	NP_112546.1	ILMN_1243812	007000307	S	1837	CCCTTACACGAGAGAAGTAAACAGCTTTCAATGGGAATGGAGTTCAGTGC	2	+	76534414-76534463	2qC3	Mus musculus pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3 (Plekha3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IDA]	FAPP1	FAPP1
Mus musculus	MEEBO	ILMN_191541	ILMN_191541	VPS11	scl35958.16_291	XM_134794.3			28490764	XM_134794.3	Vps11		ILMN_2479983	003890279	S	2	GTGGGGCCTGTGACCTCTGGGAAGGTTAAGAAGTTCACTGTGTTGATACA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204700	ILMN_204700	BIRC6	ri|A430040A19|PX00135O06|AK039987|2803					AK039987	Birc6		ILMN_1251686	000510184	S	2525	CAGTGCCAAACAGGTAGCAAACACTAGTGGTCCCAGTCAGATAGAACAGG						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IC ]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209532	ILMN_209532	SLC35F5	NM_028787.2	NM_028787.2		74150	27229189	NM_028787.2	Slc35f5	NP_083063.1	ILMN_2596693	003130471	S	2606	TGTGCTAAATTACTCTAAAACTGGGTGCTGCTTCCTTAAGTAATCTTACT	1	+	127423259-127423308	1qE3	Mus musculus solute carrier family 35, member F5 (Slc35f5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1300003P13Rik; AI646727	1300003P13Rik; AI646727
Mus musculus	Riken	ILMN_203402	ILMN_203402	5930404A08RIK	ri|5930404A08|PX00055G02|AK031091|2291					AK031091	5930404A08Rik		ILMN_2557028	006280431	S	1884	ACTGATGTCTTCTGACTCCTTTCTCCAGTGCTCTTATGGGAAAAGACCTT										
Mus musculus	RefSeq	ILMN_221188	ILMN_221188	OIT1	NM_146050.2	NM_146050.2		18300	118129790	NM_146050.2	Oit1	NP_666162.1	ILMN_2732163	005390682	S	932	GGGAGCCAAAGAAATGCCCAACGGACTTGAGAGCAGAACCCAGGAGTGCT	14	-	9181731-9181780	14qA1	Mus musculus oncoprotein induced transcript 1 (Oit1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence ISS]		AV067083; MGC37550; EF-7; 2310076N21Rik	AV067083; MGC37550; EF-7; 2310076N21Rik
Mus musculus	RefSeq	ILMN_200970	ILMN_200970	LOC384670	XM_357782.1	XM_357782.1			38087496	XM_357782.1	LOC384670		ILMN_2540648	004150465	S	310	AGCGCCATTCGCATTGGGATCTATGCTTTGCACCTGGAGAACTGGCTGCA										
Mus musculus	MEEBO	ILMN_190868	ILMN_190868	2810017I02RIK	scl069967.2_48						2810017I02Rik		ILMN_2473953	004280148	S	17	GCCAGCTGCCAGTTTGAGGCGATGTCTGCCCTGGTAAGTACAGTTCGGCT										
Mus musculus	RefSeq	ILMN_211411	ILMN_211411	CCL2	NM_011333.3	NM_011333.3		20296	141803162	NM_011333.3	Ccl2	NP_035463.1	ILMN_1245710	000110112	S	201	CCAGCAAGATGATCCCAATGAGTAGGCTGGAGAGCTACAAGAGGATCACC	11	+	81850024-81850073	11qB5-qC	Mus musculus chemokine (C-C motif) ligand 2 (Ccl2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a G-protein-coupled receptor [goid 1664] [evidence IDA]	Scya2; SMC-CF; MCP1; JE; MCAF; AI323594; HC11; Sigje; MCP-1	Scya2; SMC-CF; MCP1; JE; MCAF; AI323594; HC11; Sigje; MCP-1
Mus musculus	RefSeq	ILMN_199170	ILMN_199170	LOC192940	XM_111017.1	XM_111017.1			20345305	XM_111017.1	LOC192940		ILMN_2534298	003520068	S	42	CCACAAGGCTTGGCAGCAGCAAAAAGAAAATTGGTTCAACCAGCCAGCAG										
Mus musculus	RefSeq	ILMN_212303	ILMN_212303	OLFR1426	NM_146809.2	NM_146809.2		258805	40254188	NM_146809.2	Olfr1426	NP_667020.1	ILMN_2906440	005050670	S	1414	AGAGAAGAGCAATAGCTCGACCCTGTCACAACATTCTCAAACATTTGTAC	19	-	12162309-12162344:12162345-12162358	19qA	Mus musculus olfactory receptor 1426 (Olfr1426), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR239-1	MOR239-1
Mus musculus	RefSeq	ILMN_212303	ILMN_212303	OLFR1426	NM_146809.2	NM_146809.2		258805	40254188	NM_146809.2	Olfr1426	NP_667020.1	ILMN_2624919	007160121	S	1135	TCATACACAGTCATTCTTATGATGCTTAGATCTCATTCAGGAGAGGGCAG	19	-	12162588-12162637	19qA	Mus musculus olfactory receptor 1426 (Olfr1426), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR239-1	MOR239-1
Mus musculus	RefSeq	ILMN_198970	ILMN_198970	HEPHL1	XM_146812.7	XM_146812.7		244698	149259829	XM_146812.7	Hephl1	XP_146812.7	ILMN_1238878	007610156	S	3326	TCGCCCTCAGACTCCGATCTTCAAGGAGGCAGATGGCTTACAGGGAAGTC	9	-	14858094-14858143	9qA2	PREDICTED: Mus musculus hephaestin-like 1 (Hephl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211765	ILMN_211765	PLK3	scl23942.14.1_32	NM_013807.1			23956069	NM_013807.1	Plk3		ILMN_2619330	003870487	S	2379	ATAAGCCTGAGCCTTAGCTCCCAGCTAGGGGGCATTATTTATGGACCACT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_256115	ILMN_256115	LOC654426	NR_002690.1	NR_002690.1		654426	84662728	NR_002690.1	LOC654426		ILMN_2876629	006250095	S	4	ACAGAGACTCAGCCATGGTTCTGCAGAGGATCTTCAGGCTCTCCTCTGTC	14	+	54426120-54426169		Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F pseudogene (LOC654426), non-coding RNA.					
Mus musculus	RefSeq	ILMN_209592	ILMN_209592	THUMPD3	NM_008188.2	NM_008188.2		14911	31982314	NM_008188.2	Thumpd3	NP_032214.1	ILMN_2809988	003520612	S	1487	GGCGAAAGGTCCATGTAGTCTGGGTGAACATCGGGGGCCTTCATGCTGCA	6	+	113017693-113017742	6qE3	Mus musculus THUMP domain containing 3 (Thumpd3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW556087; Gt(ROSA)26asSor; Gtrosa26as	AW556087; Gt(ROSA)26asSor; Gtrosa26as
Mus musculus	RefSeq	ILMN_216244	ILMN_216244	OLFR135	NM_146332.1	NM_146332.1		258329	22129629	NM_146332.1	Olfr135	NP_666444.1	ILMN_1227767	004850114	S	872	CTCTGAGAAATAAGGATGTTAAGGGGGCATTAGGTAACCTATTCAGAAAC	17	+	38346063-38346112	17qB1	Mus musculus olfactory receptor 135 (Olfr135), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-48	MOR256-48
Mus musculus	RefSeq	ILMN_261724	ILMN_261724	OLFR774	NM_207620.1	NM_207620.1		258232	46518529	NM_207620.1	Olfr774	NP_997503.1	ILMN_2989898	000870669	S	440	GGCTGGGAGGGTTTCTGACCATCTTTCCATTGCTCATGCTGTTTCTCAAG	10	+	128675646-128675695	10qD3	Mus musculus olfactory receptor 774 (Olfr774), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR111-2; MOR111-11	MOR111-2; MOR111-11
Mus musculus	RefSeq	ILMN_219408	ILMN_219408	ADCY4	NM_080435.1	NM_080435.1		104110	17978249	NM_080435.1	Adcy4	NP_536683.1	ILMN_2847004	001780673	S	3171	AGAGCACAGGCGTTCTCGGCAAGATCCAAGTGACTGAGGAGACAGCGCGG	14	-	56388103-56388124:56388210-56388237	14qC3	Mus musculus adenylate cyclase 4 (Adcy4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IDA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS]	KIAA4004; mKIAA4004	KIAA4004; mKIAA4004
Mus musculus	RefSeq	ILMN_219408	ILMN_219408	ADCY4	NM_080435.1	NM_080435.1		104110	17978249	NM_080435.1	Adcy4	NP_536683.1	ILMN_1250417	001780450	S	3287	CTCTGTACCTACTTCCTGAACACAGACCTGACGCGGACCGGATCTCCCTC	14	-	56387987-56388036	14qC3	Mus musculus adenylate cyclase 4 (Adcy4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IDA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS]	KIAA4004; mKIAA4004	KIAA4004; mKIAA4004
Mus musculus	RefSeq	ILMN_219408	ILMN_219408	ADCY4	NM_080435.1	NM_080435.1		104110	17978249	NM_080435.1	Adcy4	NP_536683.1	ILMN_1218151	006100717	S	2476	GGAACCCAAGCTGATGGGAGCGATCTACTTCTTCATCTTCTTCTTCACAC	14	-	56390811-56390860	14qC3	Mus musculus adenylate cyclase 4 (Adcy4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IDA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS]	KIAA4004; mKIAA4004	KIAA4004; mKIAA4004
Mus musculus	RefSeq	ILMN_201262	ILMN_201262	LOC385005	XM_357983.1	XM_357983.1			38090242	XM_357983.1	LOC385005		ILMN_1237889	003400500	S	228	GAGCAAGGTCCCACTAACACCAAATGAAGTGATGCTGACGCCAAAAGGTC										
Mus musculus	RefSeq	ILMN_200854	ILMN_234800	EG434181	XM_914197.2	XM_914197.2		434181	94380297	XM_914197.2	EG434181	XP_919290.2	ILMN_1213197	002000176	S	153	CCACCACATGCACAGCTCGAACCTGCCAGACTTCTTAACTCCTTCTGCTC					PREDICTED: Mus musculus predicted gene, EG434181 (EG434181), mRNA.					
Mus musculus	MEEBO	ILMN_223818	ILMN_223818	LIF	scl000089.1_0				6678693	NM_008501	Lif		ILMN_2777786	002940348	S	5786	GTCAACCAATATCCCAACAATTGCTTCCCTGATGGTAACTGAGACCCAGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [evidence ISO]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence ISO]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IDA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of meiosis [goid 45835] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42503] [evidence IDA]; The process by which the anatomical structures of muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 48644] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IMP]; Interacting selectively with the leukemia inhibitory factor receptor [goid 5146] [evidence ISO]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISO]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215042	ILMN_312150	A630091E08RIK	XR_035257.1	XR_035257.1		233544	149257612	XR_035257.1	A630091E08Rik		ILMN_2654885	006020750	S	572	GCGAATGGTCTCTCCCATTGGCCAGCCTGTCAACTGCTACTAACCTGGCT	7	-	105692036-105692085	7qE2	PREDICTED: Mus musculus RIKEN cDNA A630091E08 gene (A630091E08Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_220969	ILMN_220969	COQ7	NM_009940.2	NM_009940.2		12850	142378130	NM_009940.2	Coq7	NP_034070.1	ILMN_2729263	004120376	S	469	CCTGCACCGTGGCGGTAGAAGAGTCTATCGCTAATCACTACAACAACCAG	7	-	125670901-125670950	7qF2	Mus musculus demethyl-Q 7 (Coq7), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]	clk-1	clk-1
Mus musculus	RefSeq	ILMN_196840	ILMN_196840	LOC239747	XM_155862.1	XM_155862.1			20893703	XM_155862.1	LOC239747		ILMN_1254044	004120767	S	1077	CCGTACTGAACCAAGGTGTGACTGGGGAATTGGAGTGGGAAGAAGCATCC										
Mus musculus	MEEBO	ILMN_220380	ILMN_220380	9230111E07RIK	scl077748.2_134	XM_358567.1			38075264	XM_358567.1	9230111E07Rik		ILMN_2721322	002900309	S	398	AAATCATCACCTTGCAGGCCCCTCCGTGACCAAGAGGGAATCGGCCAGCT										
Mus musculus	RefSeq	ILMN_197815	ILMN_197815	LOC236060	XM_135472.3	XM_135472.3			38078438	XM_135472.3	LOC236060		ILMN_1223372	004880672	S	264	GCATTGACCTATCTAATGCCATGTTGAGTGGAGACTTCTCACCAGGACTC										
Mus musculus	RefSeq	ILMN_242388	ILMN_242388	BC117090	NM_001001332.1	NM_001001332.1		100034679	47679085	NM_001001332.1	BC117090	NP_001001332.1	ILMN_2940312	000360706	S	134	AGAAATATGAAAAATTCGAAGCCGTTGAGTATAAAACTCAAGCCGTCGCT	16	-	36242180-36242229		Mus musculus cDNA sequence BC1179090 (BC117090), mRNA.					
Mus musculus	RefSeq	ILMN_210183	ILMN_210183	RLBP1L2	NM_175448.3	NM_175448.3		215890	142383776	NM_175448.3	Rlbp1l2	NP_780657.1	ILMN_2603071	001050544	S	1895	AAGCTTAAGGACATGTAACCTATAAAATTTAATTAAATGTATCCCTGTTT	10	-	33232695-33232744	10qA4	Mus musculus retinaldehyde binding protein 1-like 2 (Rlbp1l2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	A330019N05Rik	A330019N05Rik
Mus musculus	RefSeq	ILMN_214484	ILMN_214484	NFATC1	NM_198429.1	NM_198429.1		18018	38348192	NM_198429.1	Nfatc1	NP_940821.1	ILMN_1216522	000070392	S	4439	CGCCTGCCTCTCGTCTGTACCCCATGTTTATTAGCATCATGGAGTTGCAT	18	-	80803049-80803098	18qE3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (Nfatc1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	NFATc; NFAT2; 2210017P03Rik; AV076380; AI449492; Nfatcb; NF-ATc	NFATc; NFAT2; 2210017P03Rik; AV076380; AI449492; Nfatcb; NF-ATc
Mus musculus	RefSeq	ILMN_214484	ILMN_214484	NFATC1	NM_198429.1	NM_198429.1		18018	38348192	NM_198429.1	Nfatc1	NP_940821.1	ILMN_2648455	000450491	S	4162	GGAGTTAATGCCCCCTTATGGAACACGCCTGAATTGCACCTGTGGCTGGA	18	-	80803326-80803375	18qE3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (Nfatc1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	NFATc; NFAT2; 2210017P03Rik; AV076380; AI449492; Nfatcb; NF-ATc	NFATc; NFAT2; 2210017P03Rik; AV076380; AI449492; Nfatcb; NF-ATc
Mus musculus	RefSeq	ILMN_214484	ILMN_214484	NFATC1	NM_198429.1	NM_198429.1		18018	38348192	NM_198429.1	Nfatc1	NP_940821.1	ILMN_2648704	007160220	S	3359	GCCTTATCCAGTGCATTTTAGAGGTCTTCCAGCCTGTCTTCTTGGCTCTC	18	-	80804129-80804178	18qE3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (Nfatc1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	NFATc; NFAT2; 2210017P03Rik; AV076380; AI449492; Nfatcb; NF-ATc	NFATc; NFAT2; 2210017P03Rik; AV076380; AI449492; Nfatcb; NF-ATc
Mus musculus	MEEBO	ILMN_187520	ILMN_187520	RRM2	scl3591.1.1_204				7106398	NM_009104	Rrm2		ILMN_2714565	003440725	S	1843	TATAGCCCTGGCTGTACGGAATTCACAAGTGAGTTTGAGCCCAGTGGTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose sugar esterified with diphosphate on its glycose moiety [goid 9186] [evidence IEA]; The chemical reactions and pathways involving a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9262] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IPI]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IPI]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IPI]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]		
Mus musculus	MEEBO	ILMN_187520	ILMN_187520	RRM2	scl3591.1.1_204				7106398	NM_009104	Rrm2		ILMN_1239307	002190110	S	8	CCCCTCTGCTTGTGTCCTAAGTTCTCTCACTGTAGATGCTGTAAAAAATC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose sugar esterified with diphosphate on its glycose moiety [goid 9186] [evidence IEA]; The chemical reactions and pathways involving a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9262] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IPI]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IPI]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IPI]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]		
Mus musculus	RefSeq	ILMN_238643	ILMN_238643	NDFIP1	NM_022996.1	NM_022996.1		65113	89001090	NM_022996.1	Ndfip1	NP_075372.1	ILMN_2912872	004260333	S	673	CTGGCTCTGGTGGGTGTTCTTGGTTTTAGGCTTTCTCCTGTTTCTCAGAG	18	+	38615747-38615775:38620199-38620219	18qB3	Mus musculus Nedd4 family interacting protein 1 (Ndfip1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	N4wbp5; 0610010M22Rik	N4wbp5; 0610010M22Rik
Mus musculus	RefSeq	ILMN_191446	ILMN_234990	ENSMUSG00000058057	NM_001081471.1	NM_001081471.1		668178	125490372	NM_001081471.1	ENSMUSG00000058057	NP_001074940.1	ILMN_2479142	006580270	S	633	CCATAGAGCAGGCCAACTTCTCCAAGCTGAACCTGCAGCACATCCAGGCC	15	+	100169787-100169836	15qF1	Mus musculus predicted gene, ENSMUSG00000058057 (ENSMUSG00000058057), mRNA.				Ubie3	Ubie3
Mus musculus	MEEBO	ILMN_195081	ILMN_195081	ZFP312	scl45900.6.1_19				17978245	NM_080433	Zfp312		ILMN_2512430	000360047	S	10	CCTTGTCCGTTCTTCCTGCCCTGTACCAACCCAAGCAGATCTCACGTATA										
Mus musculus	Riken	ILMN_206018	ILMN_206018	C230078D13RIK	ri|C230078D13|PX00176D24|AK048873|1675					AK048873	C230078D13Rik		ILMN_1229870	005900608	S	1263	CCTGTCTGACCAGTATCTATTTGGGGAAGCCTCCCACCCTGCATGTTAGG										
Mus musculus	RefSeq	ILMN_225165	ILMN_225165	COL8A2	NM_199473.2	NM_199473.2		329941	118130942	NM_199473.2	Col8a2	NP_955767.1	ILMN_2839646	006180553	S	3907	CGGTAAGAGATTAGTCAACTCCCAGAGGGAGCCCTGAAGGCTGGTTCAGG	4	+	125991150-125991199	4qD2.2	Mus musculus collagen, type VIII, alpha 2 (Col8a2), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IGI]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI429819; MGC90765	AI429819; MGC90765
Mus musculus	RefSeq	ILMN_191018	ILMN_253665	LOC627081	XM_899015.2	XM_899015.2		627081	94407513	XM_899015.2	LOC627081	XP_904108.1	ILMN_1212945	000060576	S	595	ATAGAGGACCATGAAACCAAGCTCAAAAACGCTAAAGATATGTGTGACAC	X	+	70401848-70401897	XqA7.3	PREDICTED: Mus musculus X-linked lymphocyte-regulated 5-like, transcript variant 2 (LOC627081), mRNA.					
Mus musculus	Riken	ILMN_205375	ILMN_205375	D130035C10RIK	ri|D130035C10|PX00183L19|AK051328|2001					AK051328	D130035C10Rik		ILMN_2572077	006550482	S	1839	GGAGACTAACGCAGGTAAAGCCTGCCTACAGACACCAGAAGTTCATCTGC										
Mus musculus	RefSeq	ILMN_220258	ILMN_220258	SPOCK2	NM_052994.2	NM_052994.2		94214	40254122	NM_052994.2	Spock2	NP_443720.1	ILMN_1251096	000070358	S	3838	CCGCTGGGGAGCTATGCTCTGTGTGTCCCTGGATCTTCTGGTTTTGTATC	10	+	59596584-59596633	10qB4	Mus musculus sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 (Spock2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]	Gcap26; AA407235; mKIAA0275	Gcap26; AA407235; mKIAA0275
Mus musculus	MEEBO	ILMN_216080	ILMN_216080	SYCP1-PS1	scl33023.1.341_118	XM_133222.1			20821444	XM_133222.1	Sycp1-ps1		ILMN_2667127	004200521	S	182	TAAATAACAACATTGAGAAAATGATACTAGCTTTTGAGGAATTTCATGTG										
Mus musculus	RefSeq	ILMN_195422	ILMN_261755	CHD9	NM_177224.1	NM_177224.1		109151	77404416	NM_177224.1	Chd9	NP_796198.1	ILMN_2697954	006900048	S	10804	AGACCGTTACCTTGGTTTGCAGTGGAGTGTTTCAATACCACCCGCAGCCC	8	+	93577696-93577745	8qC5	Mus musculus chromodomain helicase DNA binding protein 9 (Chd9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	1810014J18Rik; mKIAA0308; AD013; A330063D19Rik; 9030205D12Rik; PRIC320	1810014J18Rik; mKIAA0308; AD013; A330063D19Rik; 9030205D12Rik; PRIC320
Mus musculus	RefSeq	ILMN_195422	ILMN_261755	CHD9	NM_177224.1	NM_177224.1		109151	77404416	NM_177224.1	Chd9	NP_796198.1	ILMN_2600528	006550100	S	2933	AAATGGCAATCAACTCAGGGAATATCAACTAGAAGGACTCAACTGGCTCT	8	+	93510013-93510062	8qC5	Mus musculus chromodomain helicase DNA binding protein 9 (Chd9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	1810014J18Rik; mKIAA0308; AD013; A330063D19Rik; 9030205D12Rik; PRIC320	1810014J18Rik; mKIAA0308; AD013; A330063D19Rik; 9030205D12Rik; PRIC320
Mus musculus	RefSeq	ILMN_197958	ILMN_314468	LOC668183	XR_034278.1	XR_034278.1		668183	149267932	XR_034278.1	LOC668183		ILMN_1235392	007320242	S	203	TGCAGAGCCAAGTCCTCCAGCTCACGGTTCACGGACAGTAAACGTTACGA				16qC1.3	PREDICTED: Mus musculus similar to Tera (LOC668183), misc RNA.					
Mus musculus	RefSeq	ILMN_196723	ILMN_196723	HIST1H4J	NM_178210.1	NM_178210.1		319159	30061350	NM_178210.1	Hist1h4j	NP_835582.1	ILMN_1256989	003870630	S	253	ATGGACGTGGTCTACGCGCTCAAGCGCCAGGGCCGCACCCTCTACGGGTT	13	+	21827217-21827266	13qA3.1	Mus musculus histone cluster 1, H4j (Hist1h4j), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211609	ILMN_211609	CYP2B9	NM_010000.2	NM_010000.2		13094	118129801	NM_010000.2	Cyp2b9	NP_034130.1	ILMN_2617625	001940504	S	1591	GTAGCTGCTCACACCCTTCCTTCTACTGTTGTTCTCCAAAGCTCCAAGGC	7	+	26995393-26995442	7qA3	Mus musculus cytochrome P450, family 2, subfamily b, polypeptide 9 (Cyp2b9), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	Cyp2b	Cyp2b
Mus musculus	RefSeq	ILMN_237516	ILMN_237516	LOC654494	NM_001039193.1	NM_001039193.1		654494	85861237	NM_001039193.1	LOC654494	NP_001034282.1	ILMN_2882996	005720327	S	2483	GGCCATCCAGAGAATGTCCCACCTAGGGATCTGTCCCATCTGCTGACACC	5	+	88927402-88927451	5qE1	Mus musculus Dzip1-like protein (LOC654494), mRNA.					
Mus musculus	MEEBO	ILMN_184595	ILMN_184595	MALT1	scl51852.17_63				27370249	NM_172833	Malt1		ILMN_2419951	006560671	S	10	CTTAAAATACAGATGAATACAATTATTATAAAGATGCCCAGTTTTTGATA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50856] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; The process whereby a hemopoietic stem cell acquires the specialized features of a B-1 B cell. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity [goid 1923] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus [goid 9620] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence RCA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [pmid 16831874] [evidence IEP]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 16831874] [evidence IEP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_251694	ILMN_251694	GLT8D3	NM_001033275.1	NM_001033275.1		223827	85701785	NM_001033275.1	Glt8d3	NP_001028447.1	ILMN_2895067	005910612	S	6376	TCTTGAGAACTCGTAACGGGGAGTGTAGAAGTGTAGACTTGGGGTCTAGC	15	-	93068030-93068079	15qE3	Mus musculus glycosyltransferase 8 domain containing 3 (Glt8d3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Gm87; Gm1228	Gm87; Gm1228
Mus musculus	Riken	ILMN_203172	ILMN_203172	HMG20A	ri|A230109N15|PX00063P23|AK039222|2468					AK039222	Hmg20a		ILMN_1233581	001820328	S	1735	GAAGGAAAACACCGGCATTCCCACTACACTGCCGTCAACCAGGGGCCAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	Riken	ILMN_204718	ILMN_204718	A530079D03RIK	ri|A530079D03|PX00142K20|AK041069|959					AK041069	A530079D03Rik		ILMN_2567108	000130632	S	867	AGTTCACAGTGCCTTTCTGGGGTTGGAATATCAGGTATTCTCAGCTCACG										
Mus musculus	RefSeq	ILMN_210185	ILMN_210185	NT5C3	NM_026004.2	NM_026004.2		107569	142348961	NM_026004.2	Nt5c3	NP_080280.2	ILMN_2603081	004200468	S	1166	GTGAACCACGGCCCCTCTTCCCACCTCCGTCACTATACTCAGCAGAATTT	6	-	56832751-56832800	6qB3	Mus musculus 5'-nucleotidase, cytosolic III (Nt5c3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Umph1; p36; 1600024P05Rik; PN-I; Nt5y; PSN1; PN-1; Umph-1; UMPH; AI842776; cN-III; 3110004A18Rik; 2610206B05Rik; lupin	Umph1; p36; 1600024P05Rik; PN-I; Nt5y; PSN1; PN-1; Umph-1; UMPH; AI842776; cN-III; 3110004A18Rik; 2610206B05Rik; lupin
Mus musculus	RefSeq	ILMN_210607	ILMN_323640	LOC100044103	XM_001472411.1	XM_001472411.1		100044103	149268074	XM_001472411.1	LOC100044103	XP_001472461.1	ILMN_1242779	004060437	S	1484	GCACCTATAGCTTGGTAACAGGCATGTTTTAGACCTGGTTGGGTGGCCAG	16	+	18553451-18553500		PREDICTED: Mus musculus similar to mKIAA1645 protein (LOC100044103), mRNA.					
Mus musculus	RefSeq	ILMN_210607	ILMN_323640	LOC100044103	XM_001472411.1	XM_001472411.1		100044103	149268074	XM_001472411.1	LOC100044103	XP_001472461.1	ILMN_2607342	001190025	S	246	TCGGAAGAAGCCCCTCTGCCTGGTGTTCTCCAGCGGAGCCTCTGATCCTG	16	+	18488062-18488111		PREDICTED: Mus musculus similar to mKIAA1645 protein (LOC100044103), mRNA.					
Mus musculus	RefSeq	ILMN_196279	ILMN_196279	WNT3A	NM_009522.1	NM_009522.1		22416	7106446	NM_009522.1	Wnt3a	NP_033548.1	ILMN_1220516	002630315	S	2578	CGTGGTGACTGACTGTCTTCTGCCTGGAACTTTGCGTTCGCGCTTGTAAC	11	-	59061667-59061716	11qB1.3	Mus musculus wingless-related MMTV integration site 3A (Wnt3a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of the target cell that contributes to the self renewal of neuroblasts in the forebrain [goid 21874] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The process by which a cell becomes committed to become a paraxial mesoderm cell [goid 48343] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IDA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	vt; Wnt-3a	vt; Wnt-3a
Mus musculus	RefSeq	ILMN_208734	ILMN_208734	LHB	NM_008497.2	NM_008497.2		16866	77404412	NM_008497.2	Lhb	NP_032523.2	ILMN_2589011	001240685	S	81	TTCGGCCACTGTGCCGGCCTGTCAACGCAACTCTGGCCGCAGAGAATGAG	7	+	52676643-52676692	7qB4	Mus musculus luteinizing hormone beta (Lhb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	LH; leutropin	LH; leutropin
Mus musculus	MEEBO	ILMN_221194	ILMN_221194	A030007E19RIK	scl077215.5_154				51762695	XM_489211	A030007E19Rik		ILMN_2732239	001070634	S	833	CATCACCTCTAATAGGAAACCCAGATCCTTTTCGATGCCACCTAGGATGG										
Mus musculus	Riken	ILMN_203474	ILMN_203474	6430518D03RIK	ri|6430518D03|PX00045L22|AK032307|3401					AK032307	6430518D03Rik		ILMN_1214356	006380554	S	2935	CTGGCCAACACATTGTCTGCTCACAGGCTTCCTTAATGTCCCACGCGTGT										
Mus musculus	RefSeq	ILMN_221159	ILMN_221159	ANXA6	NM_013472.2	NM_013472.2		11749	31981301	NM_013472.2	Anxa6	NP_038500.2	ILMN_2878060	000610019	S	2073	GCTTTGCTTGCTCTGTGTGGCGGAGAGGACTAAAGCTCCTGACCTCAGAG	11	-	54822866-54822884:54822885-54822915	11qB1.3	Mus musculus annexin A6 (Anxa6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Camb; Anx6; Cabm; AW107198; AnxVI	Camb; Anx6; Cabm; AW107198; AnxVI
Mus musculus	RefSeq	ILMN_221863	ILMN_328853	H2AFY3	NR_003523.1	NR_003523.1		67552	146134438	NR_003523.1	H2afy3		ILMN_2741360	001110576	S	1517	CAAACATAAAAATAAGCCTTGTTTAGATTTATAGCAGTGACTTTTACACA				15qD1	Mus musculus H2A histone family, member Y3 (H2afy3), non-coding RNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4933432H23Rik	4933432H23Rik
Mus musculus	RefSeq	ILMN_215134	ILMN_215134	CHRM3	NM_033269.2	NM_033269.2		12671	31542389	NM_033269.2	Chrm3	NP_150372.1	ILMN_2655907	001570255	S	3057	CCTCCCTCGGTGTGCTGTTAAACTCCATTCGTGGATTTGACTCTTGGTTC	13	-	9875920-9875969	13qA1	Mus musculus cholinergic receptor, muscarinic 3, cardiac (Chrm3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to one of its physiological ligands; muscarinic acetylcholine receptors activate inhibitory G proteins and can be activated by the fungal alkaloid muscarine [goid 7213] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence TAS]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7207] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of smooth muscle contraction [goid 45987] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with acetylcholine to initiate a change in cell activity [goid 15464] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4981] [evidence IEA]	M3R; Chrm-3; M3	M3R; Chrm-3; M3
Mus musculus	RefSeq	ILMN_196787	ILMN_196787	LOC241230	XM_140817.1	XM_140817.1			20821319	XM_140817.1	LOC241230		ILMN_2525804	003460192	S	125	GGGACCTGGTCACAGAGGAGACAGAGAAGGCTGGGGTGGCAGATACATTA										
Mus musculus	RefSeq	ILMN_186017	ILMN_238102	DIAP3	NM_019670.1	NM_019670.1		56419	9789930	NM_019670.1	Diap3	NP_062644.1	ILMN_2606436	004830386	S	3364	CATGCGTCTACAGGGAGGATCAAGGCAGTTGAGAAGGAAGCCTGTAATGC	14	-	87056232-87056281	14qE1	Mus musculus diaphanous homolog 3 (Drosophila) (Diap3), mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	mKIAA4117; mDia2; 4930417P13Rik; p134MDia2; Dia2; KIAA4117	mKIAA4117; mDia2; 4930417P13Rik; p134MDia2; Dia2; KIAA4117
Mus musculus	RefSeq	ILMN_196380	ILMN_196380	2810046O15RIK	XM_130962.1	XM_130962.1			20872597	XM_130962.1	2810046O15Rik		ILMN_2523894	002030020	S	61	TGGAGGTCACCGCGCCCAGACGCCCGAGGGCAGCTGCCCGGGCGCCTGGA										
Mus musculus	RefSeq	ILMN_209363	ILMN_209363	MTM1	NM_019926.2	NM_019926.2		17772	141802570	NM_019926.2	Mtm1	NP_064310.1	ILMN_2595143	006400630	S	3109	TAGCTTAATGGCCTACCAAATGAGACATCTCAAATATAATAGTATAATGT	X	+	68568211-68568260	XqA7.2	Mus musculus X-linked myotubular myopathy gene 1 (Mtm1), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA4176; mKIAA4176; Mtm; AF073996	KIAA4176; mKIAA4176; Mtm; AF073996
Mus musculus	RefSeq	ILMN_209363	ILMN_209363	MTM1	NM_019926.2	NM_019926.2		17772	141802570	NM_019926.2	Mtm1	NP_064310.1	ILMN_2664013	006380138	S	232	GTCCTTTCAATGGCCCCATTAAGGGAAGAGTTTACATCACAAATTATCGT	X	+	68488048-68488097	XqA7.2	Mus musculus X-linked myotubular myopathy gene 1 (Mtm1), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA4176; mKIAA4176; Mtm; AF073996	KIAA4176; mKIAA4176; Mtm; AF073996
Mus musculus	RefSeq	ILMN_211587	ILMN_211587	NR2E3	NM_013708.4	NM_013708.4		23958	133892966	NM_013708.4	Nr2e3	NP_038736.1	ILMN_1225079	003450739	S	1774	GGAAATGAGCAAAGAAAACCATAATAGACTGATAGAGAGAAAGCCAGAAG	9	-	59790753-59790802	9qB	Mus musculus nuclear receptor subfamily 2, group E, member 3 (Nr2e3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of rhodopsin gene expression [goid 45872] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	rd7; PNR; RNR; A930035N01Rik	rd7; PNR; RNR; A930035N01Rik
Mus musculus	MEEBO	ILMN_217670	ILMN_217670	KCNIP4	scl0004178.1_33	NM_030265.2			40254140	NM_030265.2	Kcnip4		ILMN_1237698	001170563	S	306	AGCGGCTCATGAAGCTCTTGCCCTGCTCAGCTGCCAAAACGTCGTCTCCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210519	ILMN_210519	ELFN1	NM_175522.2	NM_175522.2		243312	31342092	NM_175522.2	Elfn1	NP_780731.1	ILMN_2606433	002320129	S	3519	ACCAAGTCTAGCCAGCTTCATGGCACCCCCTAAATATGATCTCCCAGGCT	5	+	140450363-140450412	5qG2	Mus musculus leucine rich repeat and fibronectin type III, extracellular 1 (Elfn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI197272	AI197272
Mus musculus	RefSeq	ILMN_189122	ILMN_194875	USMG5	NM_023211.4	NM_023211.4		66477	142351604	NM_023211.4	Usmg5	NP_075700.2	ILMN_1219002	007560687	S	183	CTGGTCTTATACTTCAAGTTAAGGCCTAAGAAAACTCCAGCTGTGAAAGC	19	-	47160454-47160503	19qC3	Mus musculus upregulated during skeletal muscle growth 5 (Usmg5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]			2010301L15Rik	2010301L15Rik
Mus musculus	RefSeq	ILMN_220695	ILMN_235557	SYTL3	NM_031395.1	NM_031395.1		83672	13878232	NM_031395.1	Sytl3	NP_113572.1	ILMN_2725448	004880288	S	1785	CTGTCTCACCCTGCCAAACCAACAAAAGCTGCGTGTGAAGTCCCCAGTCC	17	+	6940760-6940809	17qA1	Mus musculus synaptotagmin-like 3 (Sytl3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IDA]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]	A430092N21; Slp3-b; Slp3-a; Slp3; mFLJ00307; MGC117869	A430092N21; Slp3-b; Slp3-a; Slp3; mFLJ00307; MGC117869
Mus musculus	RefSeq	ILMN_224011	ILMN_247424	GRB7	NM_010346.2	NM_010346.2		14786	116325997	NM_010346.2	Grb7	NP_034476.1	ILMN_2773169	000780348	S	2313	CCCCACCCGTAATCTGTACAGACTGAGAGGCCAGTTGATCTGCTCTGTTT	11	+	98316603-98316652	11qD	Mus musculus growth factor receptor bound protein 7 (Grb7), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence TAS]	MGC78181; mKIAA4028; KIAA4028	MGC78181; mKIAA4028; KIAA4028
Mus musculus	RefSeq	ILMN_196746	ILMN_196746	KLK1B1	NM_010645.2	NM_010645.2		16623	31981660	NM_010645.2	Klk1b1	NP_034775.1	ILMN_2989749	002970577	S	774	GGATCAAAGACACTTTGGCCCAAAACCCCTGAGTGACACACTGTCTGTTC	7	+	51226612-51226643:51226644-51226661	7qB4	Mus musculus kallikrein 1-related peptidase b1 (Klk1b1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	mK1; TK; mGK-1; Klk1	mK1; TK; mGK-1; Klk1
Mus musculus	RefSeq	ILMN_196746	ILMN_196746	KLK1B1	NM_010645.2	NM_010645.2		16623	31981660	NM_010645.2	Klk1b1	NP_034775.1	ILMN_1256119	000150097	S	775	ATCAAAGACACTTTGGCCCAAAACCCCTGAGTGACACACTGTCTGTTCTC	7	+	51226613-51226643:51226644-51226662	7qB4	Mus musculus kallikrein 1-related peptidase b1 (Klk1b1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	mK1; TK; mGK-1; Klk1	mK1; TK; mGK-1; Klk1
Mus musculus	RefSeq	ILMN_201517	ILMN_310318	LOC632230	XR_031205.1	XR_031205.1		632230	149250319	XR_031205.1	LOC632230		ILMN_1218708	005820484	S	931	CTCAGAGCTCAGGAAAGGGCTGCTGAAAGCTAAAGCAGTTTTCTATGAAG					PREDICTED: Mus musculus similar to Ribosomal protein L5 (LOC632230), misc RNA.					
Mus musculus	RefSeq	ILMN_210139	ILMN_210139	1810037I17RIK	NM_024461.2	NM_024461.2		67704	124286833	NM_024461.2	1810037I17Rik	NP_077781.1	ILMN_2602607	000050692	S	151	GCACCTCAGTCCGGGATGAACGGGCTTCCGAAACACTCCTACTGGCTGGA	3	+	122627465-122627514	3qG1	Mus musculus RIKEN cDNA 1810037I17 gene (1810037I17Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5730414I01Rik; MGC107621	5730414I01Rik; MGC107621
Mus musculus	RefSeq	ILMN_202220	ILMN_248830	2310016E02RIK	NM_024460.3	NM_024460.3		67695	124378004	NM_024460.3	2310016E02Rik	NP_077780.3	ILMN_1214401	002450482	S	22	GAAGTGCCGCGTTGTTCCCCAGCTAGCACTACGAAGTTCCGGCTCAGGTC	5	-	31210090-31210139	5qB1	Mus musculus RIKEN cDNA 2310016E02 gene (2310016E02Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_248830	ILMN_248830	2310016E02RIK	NM_024460.3	NM_024460.3		67695	124378004	NM_024460.3	2310016E02Rik	NP_077780.3	ILMN_2885293	004060056	S	249	TTTCTCCGCCCCAGGGTTCCAGGACATAGTCTGAGGCAAGATGGAGGGTG	5	-	31209103-31209139:31209772-31209784	5qB1	Mus musculus RIKEN cDNA 2310016E02 gene (2310016E02Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_201952	ILMN_248830	2310016E02RIK	NM_024460.3	NM_024460.3		67695	124378004	NM_024460.3	2310016E02Rik	NP_077780.3	ILMN_2545897	006250279	S	290	ATCTTGCCTCAGACTATGTCCTGGAACCCTGGGGCGGAGAAAGCGCCACT	5	-	31209062-31209111	5qB1	Mus musculus RIKEN cDNA 2310016E02 gene (2310016E02Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_259833	ILMN_259833	PPAPDC1B	NM_028000.1	NM_028000.1		71910	124487351	NM_028000.1	Ppapdc1b	NP_082276.1	ILMN_2884610	000770746	S	590	CCTTTCTGTCACCTTTACTCTTTGCAGCCGTGATTGCACTGTCCCGCACG	8	+	26832998-26833047	8qA2	Mus musculus phosphatidic acid phosphatase type 2 domain containing 1B (Ppapdc1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AW045471; 2310022A04Rik; 1810019D05Rik	AW045471; 2310022A04Rik; 1810019D05Rik
Mus musculus	RefSeq	ILMN_221416	ILMN_261698	GSTM7	NM_026672.2	NM_026672.2		68312	113679873	NM_026672.2	Gstm7	NP_080948.2	ILMN_2735294	005910564	S	567	TTGCTTACGATGTGCTTGAGAGGAACCAAGTGTTTGAGGCCAAGTGCCTG	3	-	107731829-107731878	3qF2.3	Mus musculus glutathione S-transferase, mu 7 (Gstm7), mRNA. XM_922862 XM_922867 XM_988105 XM_988145 XM_988175 XM_988211 XM_988243 XM_993607	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]	AI894236; 0610005A07Rik; Cd203c	AI894236; 0610005A07Rik; Cd203c
Mus musculus	RefSeq	ILMN_242863	ILMN_242863	FH1	NM_010209.1	NM_010209.1		14194	33859553	NM_010209.1	Fh1	NP_034339.1	ILMN_2780489	003870100	S	1241	TGTGTTGCACTCAGCGAGGCTACTGGGAGATGCTTCAGTGTCCTTCACAG	1	-	177534164-177534213	1qH4	Mus musculus fumarate hydratase 1 (Fh1), mRNA.	Any of the heteromeric enzymes that act in the TCA cycle [goid 45239] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving fumarate, the anion of trans-1,2-ethenedicarboxylic acid, the diastereoisomer of maleate. It is a key intermediate in metabolism and is formed in the TCA cycle from succinate and converted into malate [goid 6106] [evidence IEA]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-malate = fumarate + H2O [goid 4333] [evidence IEA]	Fh-1	Fh-1
Mus musculus	RefSeq	ILMN_212735	ILMN_260578	SPACA3	NM_029367.1	NM_029367.1		75622	110626053	NM_029367.1	Spaca3	NP_083643.1	ILMN_2629708	003290392	S	676	GTGACTGGGTGGATGGCTGTGACTTCTAGGACCCTCTCTGGATGGACCAA	11	+	80681178-80681206:80681207-80681227	11qB5	Mus musculus sperm acrosome associated 3 (Spaca3), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The initial contact step made between the sperm plasma membrane and outer layer of the egg during fertilization [goid 35036] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]	1700025M08Rik; SLLP1; Lyc3; MGC118348; ALLP17; RP23-20A9.2; mSLLP1	1700025M08Rik; SLLP1; Lyc3; MGC118348; ALLP17; RP23-20A9.2; mSLLP1
Mus musculus	MEEBO	ILMN_193329	ILMN_193329	RAPGEF1	scl21113.26_436				16905082	NM_054050	Rapgef1		ILMN_2590694	002900288	S	470	CCTATCCCCTTGGATCTGGAGCAGCAGGCAGTAGAATTTATGTCCACCAG							The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence TAS]		
Mus musculus	RefSeq	ILMN_211364	ILMN_211364	2210012G02RIK	NM_025617.2	NM_025617.2		66526	126723248	NM_025617.2	2210012G02Rik	NP_079893.1	ILMN_1226642	007650343	S	311	GTTGGAGCTTCCTGATCAAACCAAAGAAAACCTAGTTGCTGCCTTACAAG	4	-	106838203-106838252	4qC7	Mus musculus RIKEN cDNA 2210012G02 gene (2210012G02Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	2210010B22Rik; 6330404A07Rik; AU015593	2210010B22Rik; 6330404A07Rik; AU015593
Mus musculus	RefSeq	ILMN_211364	ILMN_211364	2210012G02RIK	NM_025617.2	NM_025617.2		66526	126723248	NM_025617.2	2210012G02Rik	NP_079893.1	ILMN_2615110	003360544	S	189	CGAACGCCTAGGATCCAGAATAGCCCGAAGAAGAAACTCGGAGAAAAGGT	4	-	106850200-106850249	4qC7	Mus musculus RIKEN cDNA 2210012G02 gene (2210012G02Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	2210010B22Rik; 6330404A07Rik; AU015593	2210010B22Rik; 6330404A07Rik; AU015593
Mus musculus	RefSeq	ILMN_214106	ILMN_211364	2210012G02RIK	NM_025617.2	NM_025617.2		66526	126723248	NM_025617.2	2210012G02Rik	NP_079893.1	ILMN_1247919	005340767	S	5902	ACAGAGGTCATGGGATAAATACAACCGACTCTAGCCTCAAGTTCACCGTC	4	-	106807058-106807107	4qC7	Mus musculus RIKEN cDNA 2210012G02 gene (2210012G02Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	2210010B22Rik; 6330404A07Rik; AU015593	2210010B22Rik; 6330404A07Rik; AU015593
Mus musculus	RefSeq	ILMN_220752	ILMN_220752	SDF4	NM_011341.4	NM_011341.4		20318	118130195	NM_011341.4	Sdf4	NP_035471.1	ILMN_2726315	001980593	S	4817	CACTGGCACGGAGAGATGGCTAAGTAGTTAAGCTTGTACTGCTCTCTTGG	4	+	155387362-155387411	4qE2	Mus musculus stromal cell derived factor 4 (Sdf4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Cab45	Cab45
Mus musculus	RefSeq	ILMN_200418	ILMN_200418	LOC384258	XM_357528.1	XM_357528.1			38081772	XM_357528.1	LOC384258		ILMN_1227967	007380575	S	358	CTGTTCTCAGGGAGCCACAGGCAGTGTGAAGAACCCTTCAAATGTTGGGG										
Mus musculus	RefSeq	ILMN_197300	ILMN_323710	LOC669675	XM_001474101.1	XM_001474101.1		669675	149264642	XM_001474101.1	LOC669675	XP_001474151.1	ILMN_1243685	005690484	S	325	CCTACCTGCACAGGCTGACATTCTCACGAACGGTGGTGTGTAAGAGAGTC	13	-	99483331-99483380	13qD1	PREDICTED: Mus musculus hypothetical LOC669675 (LOC669675), mRNA.					
Mus musculus	RefSeq	ILMN_217939	ILMN_217939	CRYL1	NM_030004.2	NM_030004.2		68631	19525728	NM_030004.2	Cryl1	NP_084280.2	ILMN_2833936	005670564	S	1195	ACTGCTTAGGTTCTGAGGTGTGGGTTCCCTGCCACCCAGGCAAACAGGCT	14	-	56229309-56229358	14qC3	Mus musculus crystallin, lambda 1 (Cryl1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: L-gulonate + NAD+ = 3-dehydro-L-gulonate + NADH [goid 50104] [evidence IEA]	1110025H08Rik; A230106J09Rik; C85932	1110025H08Rik; A230106J09Rik; C85932
Mus musculus	RefSeq	ILMN_188353	ILMN_231234	TAGLN	NM_011526.4	NM_011526.4		21345	146134442	NM_011526.4	Tagln	NP_035656.1	ILMN_1243652	006130411	S	1168	AGCATGTTGGGCTCACACGTTCCTGGCCGATGGCTTCTGGATGACTCCTC				9qA5.2	Mus musculus transgelin (Tagln), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]		Sm22a; SM22	Sm22a; SM22
Mus musculus	MEEBO	ILMN_188751	ILMN_188751	1110021J02RIK	scl068597.1_6						1110021J02Rik		ILMN_2455397	001190500	S	15	CCAGCCACTAGAAGGACGTGGTAGTGCTTCCTTCTGCTTAGTAGAGGGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215448	ILMN_215448	ANO10	NM_133979.2	NM_133979.2		102566	141802585	NM_133979.2	Ano10	NP_598740.1	ILMN_1223335	007510475	S	2262	TCTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCA	9	-	122085284-122085333	9qF4	Mus musculus anoctamin 10 (Ano10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI604832; MGC106272	AI604832; MGC106272
Mus musculus	RefSeq	ILMN_209921	ILMN_209921	PHACTR4	NM_175306.3	NM_175306.3		100169	142387565	NM_175306.3	Phactr4	NP_780515.1	ILMN_2600465	004040019	S	4410	GCCTCGCTGTCGCATGTTAAGATGCTTCCCTACTGTACAGAATCCTGTAA	4	-	131911910-131911959	4qD2.3	Mus musculus phosphatase and actin regulator 4 (Phactr4), mRNA.			Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	C330013F19Rik; mKIAA4120; N28169; AW495572; AI527228; FLJ13171; KIAA4120; 3110001B12Rik	C330013F19Rik; mKIAA4120; N28169; AW495572; AI527228; FLJ13171; KIAA4120; 3110001B12Rik
Mus musculus	RefSeq	ILMN_199644	ILMN_199644	LOC382827	XM_356701.1	XM_356701.1			38075455	XM_356701.1	LOC382827		ILMN_1250571	005130348	S	288	CCCTCAGGAGCAAGAACTGAGAGCAAGGCCACCTGAGTGCTCTGATGAAG										
Mus musculus	RefSeq	ILMN_216732	ILMN_216732	DDX47	NM_026360.2	NM_026360.2		67755	142383958	NM_026360.2	Ddx47	NP_080636.2	ILMN_1236898	006480682	S	988	CGCCAGCAGAGGTCTGGACATACCCCATGTGGATGTAGTGGTCAATTTTG	6	+	134969060-134969109	6qG1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 (Ddx47), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	C77285; 4930588A18Rik	C77285; 4930588A18Rik
Mus musculus	RefSeq	ILMN_216732	ILMN_216732	DDX47	NM_026360.2	NM_026360.2		67755	142383958	NM_026360.2	Ddx47	NP_080636.2	ILMN_2674595	000130717	S	1671	GGTGTGTACGCCACCTTATCTCAGCCGGCATTCAGCCTGATGTGGGTCAA	6	+	134973709-134973758	6qG1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 (Ddx47), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	C77285; 4930588A18Rik	C77285; 4930588A18Rik
Mus musculus	RefSeq	ILMN_216732	ILMN_216732	DDX47	NM_026360.2	NM_026360.2		67755	142383958	NM_026360.2	Ddx47	NP_080636.2	ILMN_2705067	005260113	S	844	CAACACTCAGAGAACAGCTTTGCTGCTCCGAAATCTCGGGTTCACTGCCA	6	+	134968140-134968189	6qG1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 (Ddx47), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	C77285; 4930588A18Rik	C77285; 4930588A18Rik
Mus musculus	Riken	ILMN_202347	ILMN_202347	HTATIP2	ri|4930445F10|PX00031B20|AK015389|983					AK015389	Htatip2		ILMN_2548898	004040220	S	806	AGGCTGAATGCCAGATACATCACAAGTATTTACGTGGTCGACGCTCCGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISS]; The directed movement of substances into the nucleus [goid 51170] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter during mitosis [goid 46022] [evidence ISO]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43068] [evidence ISO]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]		
Mus musculus	Riken	ILMN_207444	ILMN_207444	C330046L10RIK	ri|C330046L10|PX00667N07|AK082872|1444					AK082872	C330046L10Rik		ILMN_2587650	000060577	S	481	TGCCATGCTTCACTCCGTGTGGAGCCTGATTCCCGCCTTCCGTGGCTACG										
Mus musculus	RefSeq	ILMN_198655	ILMN_198655	LOC333831	XM_289927.2	XM_289927.2			38086692	XM_289927.2	LOC333831		ILMN_1247068	001260156	S	9	CCAGAGATTACCAGATGGCAAAAGGAATCCTACTAACAGGAACCAAGACC										
Mus musculus	RefSeq	ILMN_222498	ILMN_222498	LTB	NM_008518.1	NM_008518.1		16994	6678729	NM_008518.1	Ltb	NP_032544.1	ILMN_1258283	000160408	S	593	TCTATTACCTCTACTGCCACGTCGGGTACAGGGGCAGGACGCCCCCTGCC	17	+	35332520-35332567:35332649-35332650	17qB1	Mus musculus lymphotoxin B (Ltb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	p33; Tnfc; LTbeta; AI662801; Tnfsf3	p33; Tnfc; LTbeta; AI662801; Tnfsf3
Mus musculus	RefSeq	ILMN_211418	ILMN_254698	ACAA2	NM_177470.3	NM_177470.3		52538	142366266	NM_177470.3	Acaa2	NP_803421.1	ILMN_2704823	003310424	S	90	GGAGCTTACGGGGGCCTTCTCAAGGACTTCTCTGCCACCGATTTAACTGA	18	+	74946808-74946857	18qE2	Mus musculus acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) (Acaa2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA [goid 3988] [evidence IEA]	D18Ertd240e; AI265397; AI255831; 0610011L04Rik	D18Ertd240e; AI265397; AI255831; 0610011L04Rik
Mus musculus	RefSeq	ILMN_211277	ILMN_211277	CASC4	NM_177054.3	NM_177054.3		319996	39930596	NM_177054.3	Casc4	NP_796028.2	ILMN_1260199	004880598	S	1055	TGATGAGAATGAATCCCCTGTTGATCCGCAGCATGGCTCTAAACTGGCGG	2	+	121617011-121617060	2qE5	Mus musculus cancer susceptibility candidate 4 (Casc4), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			VGFG2573; D130060C09Rik	VGFG2573; D130060C09Rik
Mus musculus	RefSeq	ILMN_199792	ILMN_199792	LOC383021	XM_356801.1	XM_356801.1			38077394	XM_356801.1	LOC383021		ILMN_2536503	004760427	S	766	TCCCACACCGAGATAACCGAAACCACAACCCGCGAGAGCGTCACACAGAC										
Mus musculus	RefSeq	ILMN_191750	ILMN_191750	ZFP87	NM_133228.2	NM_133228.2		170763	22165393	NM_133228.2	Zfp87	NP_573491.2	ILMN_1215401	001820307	S	1965	GGTATTATGTGCTACCTTGAGCTTTCTGTCTACCAGAACATGTATCCTGG	13	-	67617274-67617323	13qB3	Mus musculus zinc finger protein 87 (Zfp87), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Mzf22; 4631412O18Rik; KRAB4; MGC25780; Zfp72; 2210039O17Rik	Mzf22; 4631412O18Rik; KRAB4; MGC25780; Zfp72; 2210039O17Rik
Mus musculus	RefSeq	ILMN_191750	ILMN_191750	ZFP87	NM_133228.2	NM_133228.2		170763	22165393	NM_133228.2	Zfp87	NP_573491.2	ILMN_2992836	002570187	S	2431	CTTTGTGAATAAAGAGCTCCCTCTACATCCAGTTCTCTCACTCTGCTTCC	13	-	67616808-67616857	13qB3	Mus musculus zinc finger protein 87 (Zfp87), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Mzf22; 4631412O18Rik; KRAB4; MGC25780; Zfp72; 2210039O17Rik	Mzf22; 4631412O18Rik; KRAB4; MGC25780; Zfp72; 2210039O17Rik
Mus musculus	RefSeq	ILMN_221708	ILMN_221708	CDX4	NM_007674.3	NM_007674.3		12592	145966782	NM_007674.3	Cdx4	NP_031700.1	ILMN_1241829	004760494	S	1243	GCTTTGCTCCTTAAAGTCTAGACTCAAGAGCCCTTGAAACTTTGTTCACA				XqD	Mus musculus caudal type homeo box 4 (Cdx4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Cdx-3; Cdx-4; Cdx3	Cdx-3; Cdx-4; Cdx3
Mus musculus	RefSeq	ILMN_196700	ILMN_237597	LOC673063	XM_001004043.1	XM_001004043.1		673063	94418490	XM_001004043.1	LOC673063	XP_001004043.1	ILMN_2525477	004060202	S	6	CAACAAGTTAGAGAAGGGGAAGTCAGGCAATAAGGTTGGGTGGTCTAGTG					PREDICTED: Mus musculus similar to protein phosphatase 1, regulatory (inhibitor) subunit 11 (LOC673063), mRNA.					
Mus musculus	MEEBO	ILMN_192998	ILMN_192998	ZSWIM5	scl25060.14_585	XM_204114.3			38078666	XM_204114.3	Zswim5		ILMN_2493231	004900131	S	4	AGGTGTCTTCGGTGTTTACTGTTTTGTCTTAGTTCCTGAGTTGGGTGGGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_187269	ILMN_187269	ABCA14	scl32125.17.1_0				46578146	NM_026458	Abca14		ILMN_1231976	005700273	S	1	GCCTTCCCATGTTCTGATGCATTAGGTCTGAAGTGTTTTGGTTATAATCT								Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187269	ILMN_187269	ABCA14	scl32125.17.1_0				46578146	NM_026458	Abca14		ILMN_1244102	005700750	S	716	GGACCCCGGAACTTCTTGGAAAACGATGGGGGAAACCCTGGTTAGCAGAG								Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209487	ILMN_209487	LNPEP	NM_172827.3	NM_172827.3		240028	146198621	NM_172827.3	Lnpep	NP_766415.1	ILMN_1242150	007380747	S	1801	ACCTGCACAATCACAGCTATGCAGCTATCCAAAGTGATGATCTCTGGGAC				17qA3.2	Mus musculus leucyl/cystinyl aminopeptidase (Lnpep), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	gp160; PLAP; IRAP; 2010309L07Rik; vp165; 4732490P18Rik; CAP	gp160; PLAP; IRAP; 2010309L07Rik; vp165; 4732490P18Rik; CAP
Mus musculus	RefSeq	ILMN_209487	ILMN_209487	LNPEP	NM_172827.3	NM_172827.3		240028	146198621	NM_172827.3	Lnpep	NP_766415.1	ILMN_1217725	007560592	S	1523	CCTGTGGCTAAATGAAGGCTTTGCCACTTTCATGGAGTATTTCTCTGTGG				17qA3.2	Mus musculus leucyl/cystinyl aminopeptidase (Lnpep), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	gp160; PLAP; IRAP; 2010309L07Rik; vp165; 4732490P18Rik; CAP	gp160; PLAP; IRAP; 2010309L07Rik; vp165; 4732490P18Rik; CAP
Mus musculus	RefSeq	ILMN_214506	ILMN_214506	NXPH4	NM_183297.2	NM_183297.2		104080	117676392	NM_183297.2	Nxph4	NP_899120.2	ILMN_2648687	003190228	S	927	CCAAGCCCTTCAAAGTCATCTGTATCTTCGTCTCCTTCCTCAGTTTTGAC	10	-	126963227-126963276	10qD3	Mus musculus neurexophilin 4 (Nxph4), mRNA.			Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	AI851051; 1110036M10Rik	AI851051; 1110036M10Rik
Mus musculus	RefSeq	ILMN_215062	ILMN_215062	PIK3CD	NM_008840.2	NM_008840.2		18707	71067113	NM_008840.2	Pik3cd	NP_032866.2	ILMN_3128616	006560017	A	4477	TCCCGGTAGCATTCTGAGACTTTGAGAACCATCACCGCTGTCTCGCCAGC	4	-	149023643-149023692	4qE2	Mus musculus phosphatidylinositol 3-kinase catalytic delta polypeptide (Pik3cd), transcript variant 1, mRNA.	A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]	2410099E07Rik; p110delta; AW545373	2410099E07Rik; p110delta; AW545373
Mus musculus	RefSeq	ILMN_215062	ILMN_215062	PIK3CD	NM_008840.2	NM_008840.2		18707	71067113	NM_008840.2	Pik3cd	NP_032866.2	ILMN_3052174	004780349	I	7	AAGGAAACAAAGTGGGAAGTGGAGTGTGCGGACTGTCAGTAGGCGGGCTG	4	-	149072742-149072791	4qE2	Mus musculus phosphatidylinositol 3-kinase catalytic delta polypeptide (Pik3cd), transcript variant 1, mRNA.	A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]	2410099E07Rik; p110delta; AW545373	2410099E07Rik; p110delta; AW545373
Mus musculus	RefSeq	ILMN_215062	ILMN_215062	PIK3CD	NM_008840.2	NM_008840.2		18707	71067113	NM_008840.2	Pik3cd	NP_032866.2	ILMN_2655112	005390754	S	3355	CCGAGAAAGCTGGAAAACCAAAGTCAACTGGCTGGCGCACAATGTGTCCA	4	-	149024765-149024814	4qE2	Mus musculus phosphatidylinositol 3-kinase catalytic delta polypeptide (Pik3cd), transcript variant 1, mRNA.	A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]	2410099E07Rik; p110delta; AW545373	2410099E07Rik; p110delta; AW545373
Mus musculus	RefSeq	ILMN_192812	ILMN_236395	FOSB	NM_008036.2	NM_008036.2		14282	110350004	NM_008036.2	Fosb	NP_032062.1	ILMN_2778279	006420520	S	3455	GGTCTGTCTGTTAATTCTGGATTTGTCGGGGACATGCAATTTTACTTCTG	7	-	19888316-19888365	7qA3	Mus musculus FBJ osteosarcoma oncogene B (Fosb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209922	ILMN_209922	1810014F10RIK	NM_026928.2	NM_026928.2		69064	124377997	NM_026928.2	1810014F10Rik	NP_081204.2	ILMN_1251065	002340458	S	573	CCCCCTTCCATGACTTGTGAGATTGATCGGGGAGGGAGTCATTGTCAAGC	7	-	147285396-147285445	7qF4	Mus musculus RIKEN cDNA 1810014F10 gene (1810014F10Rik), mRNA.		The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Interacting selectively with fucose, the pentose 6-deoxygalactose [goid 42806] [evidence ISA]		
Mus musculus	RefSeq	ILMN_223142	ILMN_329718	LOC547380	XR_030890.1	XR_030890.1		547380	149253382	XR_030890.1	LOC547380		ILMN_2759853	001690368	S	5980	GGGTCTCAGCCACTGGTGCAAACAGGAAGGCTGCGACTGGTTTTGGCTTT	4	+	148327165-148327214		PREDICTED: Mus musculus similar to castor homolog 1, zinc finger (LOC547380), misc RNA.					
Mus musculus	RefSeq	ILMN_214778	ILMN_214778	RXRG	NM_009107.2	NM_009107.2		20183	42476335	NM_009107.2	Rxrg	NP_033133.1	ILMN_1232561	005290131	S	1731	GGAGATGTTGGAGACCCCACTGCAGATCACCTGAACCTCCTCAGCTGCAG	1	+	169569375-169569404:169569405-169569424	1qH2.3	Mus musculus retinoid X receptor gamma (Rxrg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]	Nr2b3	Nr2b3
Mus musculus	RefSeq	ILMN_216264	ILMN_216264	SLC30A6	NM_144798.4	NM_144798.4		210148	146149177	NM_144798.4	Slc30a6	NP_659047.2	ILMN_2669128	004860286	S	1479	CCAACTTGCATTGACTGTTCAACCACTTACATGTCAGATTATTCCAGGCT				17qE2	Mus musculus solute carrier family 30 (zinc transporter), member 6 (Slc30a6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]; The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes [goid 6895] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]	ZnT-6; MGC11963; ZnT6	ZnT-6; MGC11963; ZnT6
Mus musculus	Riken	ILMN_207013	ILMN_207013	8030481K01RIK	ri|8030481K01|PX00650P24|AK078781|4107					AK078781	8030481K01Rik		ILMN_1231058	005890577	S	3581	CCAGGGGCAAGGTCTGTGTAGAAAGCAATGGAGAGGTCATCTGAGGGTTC										
Mus musculus	RefSeq	ILMN_212398	ILMN_212398	DTNA	NM_207650.3	NM_207650.3		13527	95113657	NM_207650.3	Dtna	NP_997533.1	ILMN_1222187	007000411	S	1893	TTCAGCATCTGCCTGTCCCACACCAACGCACACCCCGCAGGACTCCCTCA	18	+	23801719-23801768	18qA2	Mus musculus dystrobrevin alpha (Dtna), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex comprising alpha- and beta-dystrobrevin; forms part of the dystrophin glycoprotein complex [goid 16014] [evidence NAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence TAS]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2210407P21Rik; adbn; Dtn; A0; a-DB-1	2210407P21Rik; adbn; Dtn; A0; a-DB-1
Mus musculus	RefSeq	ILMN_212398	ILMN_212398	DTNA	NM_207650.3	NM_207650.3		13527	95113657	NM_207650.3	Dtna	NP_997533.1	ILMN_2625949	007380255	S	2260	TACACGCAACCCGAGGATGGCAATTATGAGAACGAGTCTGTGCGGCAGCT	18	+	23810039-23810088	18qA2	Mus musculus dystrobrevin alpha (Dtna), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex comprising alpha- and beta-dystrobrevin; forms part of the dystrophin glycoprotein complex [goid 16014] [evidence NAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence TAS]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2210407P21Rik; adbn; Dtn; A0; a-DB-1	2210407P21Rik; adbn; Dtn; A0; a-DB-1
Mus musculus	RefSeq	ILMN_212398	ILMN_212398	DTNA	NM_207650.3	NM_207650.3		13527	95113657	NM_207650.3	Dtna	NP_997533.1	ILMN_2724339	006580619	S	1259	TGAGCTGTGCTTCAAGCCGTGAACCTTTGCACCCCATGTTCCCAGACCAG	18	+	23755978-23756027	18qA2	Mus musculus dystrobrevin alpha (Dtna), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex comprising alpha- and beta-dystrobrevin; forms part of the dystrophin glycoprotein complex [goid 16014] [evidence NAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence TAS]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2210407P21Rik; adbn; Dtn; A0; a-DB-1	2210407P21Rik; adbn; Dtn; A0; a-DB-1
Mus musculus	RefSeq	ILMN_218714	ILMN_218714	HEBP1	NM_013546.2	NM_013546.2		15199	124001579	NM_013546.2	Hebp1	NP_038574.2	ILMN_2699307	006510487	S	650	CCCTATGGACGCCGTAACGAGGTCTGGCTTGTGAAGGCATGAGTCACTTG	6	-	135087898-135087906:135087907-135087947	6qG1	Mus musculus heme binding protein 1 (Hebp1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways involving heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 42168] [evidence IC ]	Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IDA]	Hebp	Hebp
Mus musculus	RefSeq	ILMN_240283	ILMN_240283	AU018091	NM_001004153.1	NM_001004153.1		245128	51921298	NM_001004153.1	AU018091	NP_001004153.1	ILMN_2988979	005340221	S	3163	AGATCTCCCCCATGAGTGCTTAGATTAAAGGCATGTGCCACCTCTGGCCT	7	-	3154903-3154952	7qA1	Mus musculus expressed sequence AU018091 (AU018091), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC91100; MGC91107	MGC91100; MGC91107
Mus musculus	RefSeq	ILMN_216238	ILMN_216238	STAM	NM_011484.2	NM_011484.2		20844	31560544	NM_011484.2	Stam	NP_035614.1	ILMN_2668808	007380059	S	250	TGCTGAGGACTGGGGCCTCATCTTGGATATTTGTGATAAGGTTGGCCAAT	2	+	14024052-14024101	2qA1-qA2	Mus musculus signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (Stam), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	STAM1	STAM1
Mus musculus	RefSeq	ILMN_216238	ILMN_216238	STAM	NM_011484.2	NM_011484.2		20844	31560544	NM_011484.2	Stam	NP_035614.1	ILMN_2668805	000510746	S	249	ACTGCTGAGGACTGGGGCCTCATCTTGGATATTTGTGATAAGGTTGGCCA	2	+	14024051-14024100	2qA1-qA2	Mus musculus signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (Stam), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	STAM1	STAM1
Mus musculus	RefSeq	ILMN_216238	ILMN_216238	STAM	NM_011484.2	NM_011484.2		20844	31560544	NM_011484.2	Stam	NP_035614.1	ILMN_1248771	004220390	S	3135	CAGTATCACGTTTATTAGACCTTAGCTTCCCTTCTGTGAATGCATATTAC	2	+	14069410-14069459	2qA1-qA2	Mus musculus signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (Stam), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	STAM1	STAM1
Mus musculus	MEEBO	ILMN_186655	ILMN_186655	D930046H04RIK	scl32310.1_540				31342414	NM_176934	D930046H04Rik		ILMN_2679876	002680647	S	1294	GTATATGTAACACTTACAATTCCAGCATTTCGGAGCCTGAAGGATGAGAG										
Mus musculus	MEEBO	ILMN_186655	ILMN_186655	D930046H04RIK	scl32310.1_540				31342414	NM_176934	D930046H04Rik		ILMN_2437378	004610367	S	8	GGGATGTTGTTCAAAATAGAGTTCTTGCTCTGTTTGATCTCTAGTACTCC										
Mus musculus	RefSeq	ILMN_221120	ILMN_253112	TIMM17B	NM_011591.4	NM_011591.4		21855	146134377	NM_011591.4	Timm17b	NP_035721.1	ILMN_2776304	006580594	S	1321	GTGGTTAGGTGCCTAGACATGCTTCGTGCACGCAGGAAAGAAGGACAAGG				XqA1.1	Mus musculus translocase of inner mitochondrial membrane 17b (Timm17b), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	mTim17b; 17kDa; Sfc3	mTim17b; 17kDa; Sfc3
Mus musculus	RefSeq	ILMN_195609	ILMN_243661	PIAS2	NM_008602.3	NM_008602.3		17344	142382362	NM_008602.3	Pias2	NP_032628.2	ILMN_2762745	006940053	S	1917	ACAGCAAGCAGTACGTCTGTCACCACCACCAGCCCCCATGAAAGCAGTAC	18	+	77391396-77391445	18qE3	Mus musculus protein inhibitor of activated STAT 2 (Pias2), mRNA. XM_990276 XM_990305 XM_990333	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of RNA on a template of DNA [goid 6351] [evidence IDA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]	SIZ2; AI462206; ARIP3; PIASxalpha; Miz1; PIASxbeta; AU018068; PIASxb; 6330408K17Rik; Dib	SIZ2; AI462206; ARIP3; PIASxalpha; Miz1; PIASxbeta; AU018068; PIASxb; 6330408K17Rik; Dib
Mus musculus	RefSeq	ILMN_195609	ILMN_243661	PIAS2	NM_008602.3	NM_008602.3		17344	142382362	NM_008602.3	Pias2	NP_032628.2	ILMN_2664681	003420612	S	2955	GAATTTAATTGATTTCATATATTTTACAGGATAATGTAGTATACTATCTT	18	+	77392434-77392483	18qE3	Mus musculus protein inhibitor of activated STAT 2 (Pias2), mRNA. XM_990276 XM_990305 XM_990333	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of RNA on a template of DNA [goid 6351] [evidence IDA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]	SIZ2; AI462206; ARIP3; PIASxalpha; Miz1; PIASxbeta; AU018068; PIASxb; 6330408K17Rik; Dib	SIZ2; AI462206; ARIP3; PIASxalpha; Miz1; PIASxbeta; AU018068; PIASxb; 6330408K17Rik; Dib
Mus musculus	RefSeq	ILMN_211234	ILMN_211234	CLPX	NM_011802.2	NM_011802.2		270166	113205070	NM_011802.2	Clpx	NP_035932.2	ILMN_3154849	006770647	A	2613	GCTAGTGGAGAGGCATTGGTTTCCCAGCTGGCACCATTAGTAACAGAGGC	9	+	65178227-65178276	9qC	Mus musculus caseinolytic peptidase X (E.coli) (Clpx), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	E330029I21; AU014732	E330029I21; AU014732
Mus musculus	RefSeq	ILMN_222218	ILMN_222218	SLC35B4	NM_021435.3	NM_021435.3		58246	146134980	NM_021435.3	Slc35b4	NP_067410.1	ILMN_2746425	005670605	S	3508	CCCCTGAACAGTTTTGCCTTCTACCTTCAGATCGCATACACACCGTGGTT				6qA3.3	Mus musculus solute carrier family 35, member B4 (Slc35b4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	4930474D06Rik; AB041549	4930474D06Rik; AB041549
Mus musculus	RefSeq	ILMN_184557	ILMN_184557	XPC	NM_009531.2	NM_009531.2		22591	121247428	NM_009531.2	Xpc	NP_033557.2	ILMN_1230273	000780204	S	3017	CTGTTTGGACCACTTTCCTGGGAGATACCTTCGGATCCCTGGACTTTGGT	6	-	91439866-91439915	6qD1	Mus musculus xeroderma pigmentosum, complementation group C (Xpc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The slowing of DNA synthesis in response to DNA damage by the prevention of new origin firing and the stabilization of slow replication fork progession [goid 31573] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IDA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184557	ILMN_184557	XPC	NM_009531.2	NM_009531.2		22591	121247428	NM_009531.2	Xpc	NP_033557.2	ILMN_1238384	000020072	S	3525	CTGGATACATTTACTCTGTACTGATGATACATTTTCTAAGCTGCTGTATG	6	-	91439358-91439407	6qD1	Mus musculus xeroderma pigmentosum, complementation group C (Xpc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The slowing of DNA synthesis in response to DNA damage by the prevention of new origin firing and the stabilization of slow replication fork progession [goid 31573] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IDA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]		
Mus musculus	RefSeq	ILMN_236875	ILMN_236875	FBXL10	NM_013910.2	NM_013910.2		30841	54607025	NM_013910.2	Fbxl10	NP_038938.1	ILMN_3038394	002260403	I	150	TGGCCATGTCCGTGAGCGCCGAGGACGACGACTATGAATCGGAGCCCGAC	5	-	123350160-123350209	5qF	Mus musculus F-box and leucine-rich repeat protein 10 (Fbxl10), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2
Mus musculus	RefSeq	ILMN_191500	ILMN_236875	FBXL10	NM_013910.2	NM_013910.2		30841	54607025	NM_013910.2	Fbxl10	NP_038938.1	ILMN_2479611	002060646	S	3342	ATACCAAGAATCAGGTAGAATAAATGTGCCCACACCCTCTCCTTTGTCCT	5	-	123320812-123320861	5qF	Mus musculus F-box and leucine-rich repeat protein 10 (Fbxl10), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2
Mus musculus	RefSeq	ILMN_191643	ILMN_236875	FBXL10	NM_013910.2	NM_013910.2		30841	54607025	NM_013910.2	Fbxl10	NP_038938.1	ILMN_1252046	004120273	S	1799	AAGTCCATCACACCCCTGATGCTGAGCGGTATCATCCGGCGACAGCCTGT	5	-	123329565-123329614	5qF	Mus musculus F-box and leucine-rich repeat protein 10 (Fbxl10), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2
Mus musculus	RefSeq	ILMN_188333	ILMN_236875	FBXL10	NM_013910.2	NM_013910.2		30841	54607025	NM_013910.2	Fbxl10	NP_038938.1	ILMN_2451769	000020202	S	1647	GAGCAGCCCACGTCATGCATAGGGAGGTGTGGATGGCAGTCTTCAGCTAC	5	-	123330237-123330286	5qF	Mus musculus F-box and leucine-rich repeat protein 10 (Fbxl10), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2
Mus musculus	RefSeq	ILMN_199863	ILMN_236875	FBXL10	NM_013910.2	NM_013910.2		30841	54607025	NM_013910.2	Fbxl10	NP_038938.1	ILMN_1215434	006520554	S	2046	ATCTCCTGTCTCCACCCACAGACAACAGGCCAGGTCAGATGGACAATCGG	5	-	123328645-123328662:123329254-123329285	5qF	Mus musculus F-box and leucine-rich repeat protein 10 (Fbxl10), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2
Mus musculus	RefSeq	ILMN_222782	ILMN_222782	OLFR828	NM_146605.1	NM_146605.1		258598	33239271	NM_146605.1	Olfr828	NP_666816.1	ILMN_1234579	006330386	S	757	GGTACAGCATTGGGTGTTTATATTAGCTCTTCATTCACTACCTCAGTCAC	9	-	18619930-18619979	9qA2	Mus musculus olfactory receptor 828 (Olfr828), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR149-1	MOR149-1
Mus musculus	RefSeq	ILMN_198091	ILMN_198091	LOC381066	XM_354986.1	XM_354986.1			38081801	XM_354986.1	LOC381066		ILMN_2530460	002490615	S	2542	GTGGTGTTCCCTGCTTACAAATCACAAGGGAATAAGTAGTAGACTCACAA										
Mus musculus	Riken	ILMN_204712	ILMN_204712	MAP3K8	ri|A530060H22|PX00142D07|AK041009|1988					AK041009	Map3k8		ILMN_1259643	005960273	S	1879	GGGCCAGAAACCACAGTCATTAGACGGATGTACAACCTGACCAGCAAAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]		
Mus musculus	RefSeq	ILMN_253255	ILMN_253255	TRPC6	NM_013838.1	NM_013838.1		22068	7305596	NM_013838.1	Trpc6	NP_038866.1	ILMN_2915118	004900711	S	2885	TGTATTGCAGGCCCAGATTGATAAGGAGAGCGATGAGGTGAATGAAGGGG	9	+	8679497-8679543:8680414-8680416	9qA1	Mus musculus transient receptor potential cation channel, subfamily C, member 6 (Trpc6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 15279] [evidence IDA]	LLHWJM004; LLHWJM002; AV025995; Trrp6; mtrp6; LLHWJM003	LLHWJM004; LLHWJM002; AV025995; Trrp6; mtrp6; LLHWJM003
Mus musculus	RefSeq	ILMN_218557	ILMN_218557	SCAMP4	NM_019575.4	NM_019575.4		56214	46593030	NM_019575.4	Scamp4	NP_062521.1	ILMN_2697270	004570242	S	1517	CCACAGCACCTCTGATGACATTGGACTCAATATTCTTCCTTGTGACCCGA	10	+	80078243-80078292	10qC1	Mus musculus secretory carrier membrane protein 4 (Scamp4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		2410022D05Rik; AU022392; AI448940; A430024H01Rik; Sc4	2410022D05Rik; AU022392; AI448940; A430024H01Rik; Sc4
Mus musculus	RefSeq	ILMN_211071	ILMN_211071	MRPL11	NM_025553.3	NM_025553.3		66419	146134891	NM_025553.3	Mrpl11	NP_079829.1	ILMN_1232776	005870326	S	325	GGGCAGCCCACTGTTTCTTACTTTTTGAAGGCAGCTGCTGGGATCGAGAA				19qA	Mus musculus mitochondrial ribosomal protein L11 (Mrpl11), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]	2410001P07Rik	2410001P07Rik
Mus musculus	MEEBO	ILMN_188080	ILMN_188080	FBLN1	scl014114.15_45				6753821	NM_010180	Fbln1		ILMN_2449644	001690164	S	17	GGGCACTCCCTCTTGTTGCTTTCCCACCCTTGGGGTTCTAATAAACTCTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218321	ILMN_218321	HPS4	NM_138646.2	NM_138646.2		192232	42476086	NM_138646.2	Hps4	NP_619587.2	ILMN_2694329	003710414	S	2228	GGGTAAACCTGCTGTGAGCTGGGTGCAGCTTGCATATCACGAGGGCCATG	5	+	112807134-112807150:112807151-112807183	5qF	Mus musculus Hermansky-Pudlak syndrome 4 homolog (human) (Hps4), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]	The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISS]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence ISS]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]	le; C130020P05Rik; mKIAA1667; AU040608	le; C130020P05Rik; mKIAA1667; AU040608
Mus musculus	MEEBO	ILMN_190870	ILMN_190870	ANAPC1	scl18686.47_19				6678833	NM_008569	Anapc1		ILMN_1258276	003710296	S	20	CTGTATGGGAACAGGACAGAATGGGACAGATTGACTTACCAGCAGAGCTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220721	ILMN_220721	KHDRBS1	NM_011317.3	NM_011317.3		20218	110626030	NM_011317.3	Khdrbs1	NP_035447.3	ILMN_2725789	004760471	S	941	CTTGAACGGAGTACCTGAACCCTCTCGTGGTCGTGGGGTATCTGTGAGAG	4	-	129399925-129399974	4qD2.2	Mus musculus KH domain containing, RNA binding, signal transduction associated 1 (Khdrbs1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that modulates the frequency, rate or extent of the directed movement of RNA from the nucleus to the cytoplasm [goid 46831] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IPI]	Sam68; p62	Sam68; p62
Mus musculus	RefSeq	ILMN_220721	ILMN_220721	KHDRBS1	NM_011317.3	NM_011317.3		20218	110626030	NM_011317.3	Khdrbs1	NP_035447.3	ILMN_1256052	000060133	S	1181	GAGAATACCTTTGCCTCCCACACCTGCACCAGAAACATACGAAGATTATG	4	-	129397349-129397350:129397896-129397943	4qD2.2	Mus musculus KH domain containing, RNA binding, signal transduction associated 1 (Khdrbs1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that modulates the frequency, rate or extent of the directed movement of RNA from the nucleus to the cytoplasm [goid 46831] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IPI]	Sam68; p62	Sam68; p62
Mus musculus	MEEBO	ILMN_186794	ILMN_186794	6330415B21RIK	scl28832.1.1_312						6330415B21Rik		ILMN_1227650	003870132	S	3	TTTCCAGGATCCCTTGGCCCTCGCGAGCCTTTAGGATGTGGGTTTTATCG										
Mus musculus	RefSeq	ILMN_218418	ILMN_218418	IL1RN	NM_031167.4	NM_031167.4		16181	145301622	NM_031167.4	Il1rn	NP_112444.1	ILMN_1233093	004260441	S	2217	AACCCAATAGATGAACACTTGGTTCAAAATCACTAAAGCTCAAATACTCC				2qA3	Mus musculus interleukin 1 receptor antagonist (Il1rn), transcript variant 1, mRNA.	Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Blocks the binding of interleukin-1 to the interleukin-1 receptor complex [goid 5152] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]	F630041P17Rik; IL-1ra	F630041P17Rik; IL-1ra
Mus musculus	RefSeq	ILMN_211603	ILMN_211603	FBXO34	NM_030236.2	NM_030236.2		78938	142357418	NM_030236.2	Fbxo34	NP_084512.1	ILMN_1227903	002030398	S	3	TTTAGCCAACAAATGGGTTTCGGGGCGAGCGTTGGGCTCCGCCGCTCAGC	14	+	48092238-48092249:48092250-48092287	14qC1	Mus musculus F-box protein 34 (Fbxo34), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2900057B08Rik; 5830426G16Rik	2900057B08Rik; 5830426G16Rik
Mus musculus	RefSeq	ILMN_211603	ILMN_211603	FBXO34	NM_030236.2	NM_030236.2		78938	142357418	NM_030236.2	Fbxo34	NP_084512.1	ILMN_2747553	006380148	S	2618	TACCCTAGGCCTGTATGCTCGTTCCCGTGAGAGTGGTGACTGCAGACCGA	14	+	48151310-48151359	14qC1	Mus musculus F-box protein 34 (Fbxo34), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2900057B08Rik; 5830426G16Rik	2900057B08Rik; 5830426G16Rik
Mus musculus	RefSeq	ILMN_208649	ILMN_208649	LRP1	NM_008512.2	NM_008512.2		16971	124494255	NM_008512.2	Lrp1	NP_032538.2	ILMN_1237723	002570615	S	14762	GGGCAGCCCCATTTTGGGGACGTGAACGTTTTAATAATTTTTGCTGAATT	10	-	126975293-126975342	10qD3	Mus musculus low density lipoprotein receptor-related protein 1 (Lrp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte [goid 43277] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI316852; Lrp; CD91; A2mr	AI316852; Lrp; CD91; A2mr
Mus musculus	RefSeq	ILMN_186948	ILMN_311300	LOC100047800	XM_001478884.1	XM_001478884.1		100047800	149251836	XM_001478884.1	LOC100047800	XP_001478934.1	ILMN_1222890	003840280	S	462	TGACCATTTAAGGTCGCTGTGCGGTAGGACAGATCCCGCCAGTGAGAAGC					PREDICTED: Mus musculus similar to RAP1, GTP-GDP dissociation stimulator 1 (LOC100047800), mRNA.					
Mus musculus	RefSeq	ILMN_223876	ILMN_311300	LOC100047800	XM_001478884.1	XM_001478884.1		100047800	149251836	XM_001478884.1	LOC100047800	XP_001478934.1	ILMN_2770876	004290653	S	3282	CCCCCGACAGGAGATACCTGTATCTCTGCGTTCTCTAAATCGGACTTTGC					PREDICTED: Mus musculus similar to RAP1, GTP-GDP dissociation stimulator 1 (LOC100047800), mRNA.					
Mus musculus	RefSeq	ILMN_216486	ILMN_216486	TGFB1I1	NM_009365.2	NM_009365.2		21804	40254611	NM_009365.2	Tgfb1i1	NP_033391.1	ILMN_2693246	003400441	S	2826	TGGAGAGGCCTACCCCTAAGATGCTCTAGGTTTGTCAATTTCAGAAAGGG	7	+	135397026-135397075	7qF3	Mus musculus transforming growth factor beta 1 induced transcript 1 (Tgfb1i1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of adipocyte differentiation [goid 45599] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TSC-5; hic-5; Hic5; ARA55	TSC-5; hic-5; Hic5; ARA55
Mus musculus	RefSeq	ILMN_216486	ILMN_216486	TGFB1I1	NM_009365.2	NM_009365.2		21804	40254611	NM_009365.2	Tgfb1i1	NP_033391.1	ILMN_1227722	002970692	S	2818	CCAGCCACTGGAGAGGCCTACCCCTAAGATGCTCTAGGTTTGTCAATTTC	7	+	135397018-135397067	7qF3	Mus musculus transforming growth factor beta 1 induced transcript 1 (Tgfb1i1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of adipocyte differentiation [goid 45599] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TSC-5; hic-5; Hic5; ARA55	TSC-5; hic-5; Hic5; ARA55
Mus musculus	RefSeq	ILMN_209194	ILMN_209194	SYT8	NM_018802.4	NM_018802.4		55925	146134375	NM_018802.4	Syt8	NP_061272.2	ILMN_2593457	007610639	S	1231	TGTGGGCAAAGTGCTGCTGGGTTCCCGGGCTTCTGGCCAACCCCTACAGC				7qF5	Mus musculus synaptotagmin VIII (Syt8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IPI]	MGC124104; MGC124105	MGC124104; MGC124105
Mus musculus	RefSeq	ILMN_223811	ILMN_227818	STARD3	NM_021547.2	NM_021547.2		59045	133892541	NM_021547.2	Stard3	NP_067522.1	ILMN_2769734	004260040	S	1623	AGCAGAGGTGGCACCTCATTCCCTGGCTGTCGTAGTCCACTAAGCCATAC	11	+	98241982-98242031	11qD	Mus musculus START domain containing 3 (Stard3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence IEA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]	es64; Mln64	es64; Mln64
Mus musculus	RefSeq	ILMN_196324	ILMN_196324	IMP3	NM_133976.1	NM_133976.1		102462	19527195	NM_133976.1	Imp3	NP_598737.1	ILMN_2593208	001440309	S	537	GCGCGATGACTTTGATCTAGATGCCTAGCGAGTCTTCTTGTCCTGGCTTC	9	+	56736173-56736198:56736199-56736222	9qB	Mus musculus IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) (Imp3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IGI]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; Interacting selectively with a protein constituent of a small nucleolar ribonucleoprotein particle [goid 30519] [evidence ISA]	AI256594; 1190002L16Rik	AI256594; 1190002L16Rik
Mus musculus	Riken	ILMN_205423	ILMN_205423	PIK3C2G	ri|E330008L07|PX00211B08|AK054271|2071					AK054271	Pik3c2g		ILMN_2572446	002630615	S	1827	CAGTGCGCCTGTGATTAACATGACTGAGGCCAGATGGAAGCAGATGCTAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate [goid 35005] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215809	ILMN_319917	LOC100048445	XM_001480467.1	XM_001480467.1		100048445	149268014	XM_001480467.1	LOC100048445	XP_001480517.1	ILMN_2663832	000290433	S	244	ACCCTAGGCCAGTGTGGCGTAGAGGCCCTGACCACTCTGGAAGTAGCAGG					PREDICTED: Mus musculus similar to fau (LOC100048445), mRNA.					
Mus musculus	Riken	ILMN_204662	ILMN_204662	9430032P18RIK	ri|9430032P18|PX00108P08|AK034767|2589					AK034767	9430032P18Rik		ILMN_1235012	000050156	S	2375	GTGTAAAGGAATTAGGGATGGAGGGGGAGCCCAAGGGAGATAGGAGGGCC										
Mus musculus	RefSeq	ILMN_206514	ILMN_221917	MID2	NM_011845.2	NM_011845.2		23947	134023660	NM_011845.2	Mid2	NP_035975.1	ILMN_1222258	001170674	S	5539	CACTCCCACACTTACTTGTAGCTCCTGAAGCCAATTCCAGCCTTAGAGCC	X	+	137301877-137301926	XqF1	Mus musculus midline 2 (Mid2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Trim1; FXY2	Trim1; FXY2
Mus musculus	RefSeq	ILMN_190514	ILMN_190514	VAMP8	NM_016794.2	NM_016794.2		22320	31980628	NM_016794.2	Vamp8	NP_058074.2	ILMN_2499400	001770685	S	385	CTCATTATACTTTTTGCCACTGGTACCATCCCCACTTAAGAGTCCCTTCC	6	-	72335480-72335503:72335504-72335529	6qC1	Mus musculus vesicle-associated membrane protein 8 (Vamp8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence TAS]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	endobrevin; Edb; AU041171	endobrevin; Edb; AU041171
Mus musculus	RefSeq	ILMN_190514	ILMN_190514	VAMP8	NM_016794.2	NM_016794.2		22320	31980628	NM_016794.2	Vamp8	NP_058074.2	ILMN_1219136	004670474	S	162	CCTGCAGAGTGAGGTGGAGGGAGTCAAGAATATTATGACCCAGAATGTGG	6	-	72338311-72338360	6qC1	Mus musculus vesicle-associated membrane protein 8 (Vamp8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence TAS]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	endobrevin; Edb; AU041171	endobrevin; Edb; AU041171
Mus musculus	RefSeq	ILMN_199384	ILMN_199384	OLFR1217	NM_146901.1	NM_146901.1		258903	22129080	NM_146901.1	Olfr1217	NP_667112.1	ILMN_2651341	003290181	S	838	CTGCTCAATCCTATGGTTTACACTTTCAGGAATAAGGAAATGATAAATGC	2	-	88863271-88863320	2qE1	Mus musculus olfactory receptor 1217 (Olfr1217), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR233-4	MOR233-4
Mus musculus	RefSeq	ILMN_222541	ILMN_222541	AQP3	NM_016689.2	NM_016689.2		11828	121949812	NM_016689.2	Aqp3	NP_057898.2	ILMN_2991272	003360161	S	1376	CCATGTGGAGGTGGACCCAGAAGTGAGTTTCTAAGTATGCGTGTGCCTAC	4	-	41040094-41040143	4qA5	Mus musculus aquaporin 3 (Aqp3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]	AQP-2	AQP-2
Mus musculus	RefSeq	ILMN_216199	ILMN_216199	CGGBP1	NM_178647.2	NM_178647.2		106143	31340918	NM_178647.2	Cggbp1	NP_848762.1	ILMN_2668387	004150392	S	4148	CAGTCCGTTACCTAGTGCTATTCTCCTTGTATCCAGAACACTATTAAAAT	16	+	64859145-64859194	16qC1.3	Mus musculus CGG triplet repeat binding protein 1 (Cggbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence ISO]	AA960172; AL023996; AW045841	AA960172; AL023996; AW045841
Mus musculus	RefSeq	ILMN_198780	ILMN_237504	EG622335	XM_916764.2	XM_916764.2		622335	94381399	XM_916764.2	EG622335	XP_921857.1	ILMN_2532903	001500091	S	285	GGTAGGAACTCTGAAAGCTGCAAAACGAAGGAAGATTGTTACATACACAG				7qF4	PREDICTED: Mus musculus predicted gene, EG622335 (EG622335), mRNA.					
Mus musculus	MEEBO	ILMN_209247	ILMN_209247	EIF4EL3	scl026987.6_0	NM_023314.2			24475675	NM_023314.2	Eif4el3		ILMN_2593993	002600446	S	656	AACTACAGCCCGAATCCGGGATACTCTTCGGCGCGTGCTTAACCTACCTC										
Mus musculus	MEEBO	ILMN_189208	ILMN_189208	SCL0001562.1_73	scl0001562.1_73	BC059847.1			37604161	BC059847.1	scl0001562.1_73		ILMN_2459291	001570608	S	9	TAGCGGACCTAAAGGAAGGACCCCACCCGCACCTAAAACCTCCAGACTAT										
Mus musculus	RefSeq	ILMN_199841	ILMN_224575	CACNA1I	NM_001044308.1	NM_001044308.1		239556	113195695	NM_001044308.1	Cacna1i	NP_001037773.1	ILMN_1240531	001090458	S	1861	GAGGAGATCTTCCAATATGTCTGTCACATCCTTCGCAAGGCCAAGCGCCG	15	+	80189373-80189422	15qE1	Mus musculus calcium channel, voltage-dependent, alpha 1I subunit (Cacna1i), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISO]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]	Catalysis of the transmembrane transfer of a calcium ion by a low voltage-gated channel [goid 8332] [evidence ISO]		
Mus musculus	RefSeq	ILMN_194436	ILMN_194436	TSHZ3	NM_172298.2	NM_172298.2		243931	118130038	NM_172298.2	Tshz3	NP_758502.1	ILMN_1253593	000380438	S	4779	CCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT	7	+	37558253-37558302	7qB2	Mus musculus teashirt zinc finger family member 3 (Tshz3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Tsh3; A630038G13Rik; Zfp537; mKIAA1474; teashirt3; KIAA1474	Tsh3; A630038G13Rik; Zfp537; mKIAA1474; teashirt3; KIAA1474
Mus musculus	RefSeq	ILMN_200612	ILMN_200612	LOC384396	XM_357620.1	XM_357620.1			38084279	XM_357620.1	LOC384396		ILMN_1220467	004890722	S	3	GATCCGATTCATCCTCATCCAGAACGGAGCAGGCAAGATGCGCCTGACCA										
Mus musculus	MEEBO	ILMN_184259	ILMN_184259	UBE2H	scl29202.9_51				42476282	NM_009459	Ube2h		ILMN_2417174	003710129	S	18	CACTGAACACCTCCACCAGCTCTTTGGGAATTGGATGGAAAGGCGGCCCC							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]		
Mus musculus	Riken	ILMN_202804	ILMN_202804	2700010E02RIK	ri|5930418H01|PX00055G04|AK031158|1973					AK031158	2700010E02Rik		ILMN_1233859	007050369	S	1825	GCTGCTCCTAGCTGCCAGACCACCACACAGTGAGAAACCTTGGCGGAAAC										
Mus musculus	RefSeq	ILMN_184825	ILMN_244157	GPC1	NM_016696.3	NM_016696.3		14733	146134504	NM_016696.3	Gpc1	NP_057905.1	ILMN_2635784	007210039	S	3460	GGTACTGGGTCCTTTCTCTGTCACTCGGTGTCAGTGGATAATGTGTGTTC				1qD	Mus musculus glypican 1 (Gpc1), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]			AI462976	AI462976
Mus musculus	MEEBO	ILMN_213423	ILMN_213423	AI326477	scl28313.10_313	NM_172891.1			27370361	NM_172891.1	AI326477		ILMN_2636934	003870209	S	2898	CTGTAAGACTAAGGAGAATCAGCCTATAGAGCCAAAGCTAGAACCAGGGA										
Mus musculus	RefSeq	ILMN_208615	ILMN_243196	HNRPA0	XM_001001311.2	XM_001001311.2		77134	149264162	XM_001001311.2	Hnrpa0	XP_001001311.1	ILMN_2645645	006100280	S	879	GCAACGGCTTCGGCGGCTTCGGCAGCTACAGCCAGCACCAGTCCTCGTAC				13qB1	PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein A0 (Hnrpa0), mRNA.					
Mus musculus	RefSeq	ILMN_213198	ILMN_213198	ABTB2	NM_178890.3	NM_178890.3		99382	49402266	NM_178890.3	Abtb2	NP_849221.2	ILMN_2634654	006980288	S	4497	AATGTTGTTACTTACTGTAAATGTGCTATGGTTTTATCAACAATAAACAC	2	+	103558519-103558568	2qE2	Mus musculus ankyrin repeat and BTB (POZ) domain containing 2 (Abtb2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AW539457	AW539457
Mus musculus	RefSeq	ILMN_201183	ILMN_201183	LOC382058	XM_356133.1	XM_356133.1			38089675	XM_356133.1	LOC382058		ILMN_1240671	003520465	S	55	CTTTCTTTTCGCGGGTTCGAGCACCTGGCCGATCTCTTTTTGGGTTCGCG										
Mus musculus	RefSeq	ILMN_201390	ILMN_201390	LOC385080	XM_358040.1	XM_358040.1			38093451	XM_358040.1	LOC385080		ILMN_1256728	006060273	S	630	GGAGGATCTCCAAGTAAGTTCCCTGAATGCAGAGAAAACTGTTGTCCTAG										
Mus musculus	RefSeq	ILMN_219627	ILMN_219627	TGFB1	NM_011577.1	NM_011577.1		21803	6755774	NM_011577.1	Tgfb1	NP_035707.1	ILMN_2711461	005130139	S	1894	TACAACCAACACAACCCGGGCGCTTCGGCGTCACCGTGCTGCGTGCCGCA	7	+	26489815-26489864	7qA3	Mus musculus transforming growth factor, beta 1 (Tgfb1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence TAS]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence TAS]; Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IDA]; Any process that modulates the frequency, rate or extent of movement of proteins from the cytoplasm to the nucleus [goid 42306] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgA isotypes [goid 48298] [evidence ISO]; Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51098] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 51101] [evidence IDA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process by which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types [goid 45066] [evidence IDA]; The process by which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types [goid 45066] [evidence IMP]; The expansion of a mononuclear cell population by cell division. A mononuclear cell is a leukocyte with a single non-segmented nucleus in the mature form [goid 32943] [evidence IMP]; Tolerance induction directed at self antigens [goid 2513] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IDA]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with the transforming growth factor beta receptor [goid 5160] [evidence TAS]	TGF-beta1; Tgfb-1; Tgfb	TGF-beta1; Tgfb-1; Tgfb
Mus musculus	Riken	ILMN_203515	ILMN_203515	9330166I09RIK	ri|9330166I09|PX00106D23|AK034238|3690					AK034238	9330166I09Rik		ILMN_2557895	001990594	S	3589	CCATGGAATGGGGCAGAGGTGACCTGAGAAAAACAGCTTAGACTCTGGAA										
Mus musculus	Riken	ILMN_204593	ILMN_204593	C130037I06RIK	ri|C130037I06|PX00169O19|AK048146|1738					AK048146	C130037I06Rik		ILMN_2566173	004880646	S	1381	GGACATTTGTCCCTGTAGGATGGGGCCTAGAAGAAACTGGGAAAGACCAA										
Mus musculus	RefSeq	ILMN_221240	ILMN_221240	OGFOD2	NM_025671.2	NM_025671.2		66627	142374427	NM_025671.2	Ogfod2	NP_079947.1	ILMN_1228590	005910537	S	798	CTTGAAGGAGACCCTGGAAGTGGAGCATGTGGTGGGCTCTGGTATCCTGC	5	+	124564735-124564784	5qF	Mus musculus 2-oxoglutarate and iron-dependent oxygenase domain containing 2 (Ogfod2), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]	1300006G11Rik; 5730405M13Rik; AU041636; AW552395	1300006G11Rik; 5730405M13Rik; AU041636; AW552395
Mus musculus	RefSeq	ILMN_223914	ILMN_240866	PRKAG1	NM_016781.2	NM_016781.2		19082	124107595	NM_016781.2	Prkag1	NP_058061.2	ILMN_2771396	000940093	S	1298	CCTTCTGGGTGAGCCACGGGCTTTGTGCTCCTCGGGTAGATTCTGATCTC	15	-	98643519-98643568	15qF1	Mus musculus protein kinase, AMP-activated, gamma 1 non-catalytic subunit (Prkag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of AMP [goid 4679] [evidence TAS]	Prkaac; BB036179; AA571379	Prkaac; BB036179; AA571379
Mus musculus	Riken	ILMN_206973	ILMN_206973	4932442L11RIK	ri|4932442L11|PX00641H10|AK077061|2895					AK077061	4932442L11Rik		ILMN_1227125	003610692	S	2167	CTAGAACTCACGATCCCGCCGCCTCAGCACCCCTGTACCCACATACTGGG										
Mus musculus	RefSeq	ILMN_208959	ILMN_208959	CPNE2	NM_153507.2	NM_153507.2		234577	25141333	NM_153507.2	Cpne2	NP_705727.1	ILMN_2870487	004540615	S	2027	CAGAGTCAATGGATGATGCTTCCAGGACAAATCGGCTTCCTCTCCCCACC	8	+	97094154-97094203	8qC5	Mus musculus copine II (Cpne2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC37787; MGC30751	MGC37787; MGC30751
Mus musculus	MEEBO	ILMN_192895	ILMN_192895	SCL0002931.1_34	scl0002931.1_34	AK012972.1			12850051	AK012972.1	scl0002931.1_34		ILMN_2492339	006040041	S	10	TCTGTAAAACAGTACAATGGAAAAATGAAAACGAAAGACATAATTGAGGA										
Mus musculus	RefSeq	ILMN_201067	ILMN_201067	LOC384746	XM_357839.1	XM_357839.1			38088515	XM_357839.1	LOC384746		ILMN_1221801	002120661	S	325	CAGTCTCTTAATGATGACGGTGATGGTCACAGCAGTGAGCAGCTCTGCTG										
Mus musculus	MEEBO	ILMN_184700	ILMN_184700	WDR9	scl093871.1_35				21553076	NM_145125	Wdr9		ILMN_2499824	001660544	S	18	CTGAGGTTTGTAATGGAGCAGAATGCAGAACATTAAAGATGCACGGGATG										
Mus musculus	MEEBO	ILMN_184700	ILMN_184700	WDR9	scl093871.1_35				21553076	NM_145125	Wdr9		ILMN_1252496	002230626	S	1	CTGGCCTCTGGTCGTTGTGCTACAAATGTTTTGCCTACAGAGGATGTGGA										
Mus musculus	Riken	ILMN_205136	ILMN_205136	KDEL1	ri|9530028P10|PX00111P24|AK035391|2032					AK035391	Kdel1		ILMN_1233139	000990670	S	1866	CTGCCTGGGCATTCTGGCCATGAGAGATGGTTTTCTGCACCTTGCATGGA										
Mus musculus	MEEBO	ILMN_193603	ILMN_193603	4930562C03RIK	scl0067667.1_112				51764696	XM_134612	4930562C03Rik		ILMN_2498717	005570377	S	9	GATCCATTTGTCTAAGCTCTAAACACAACTCTAATAGTTTCCTTGAACAG										
Mus musculus	MEEBO	ILMN_218151	ILMN_218151	FVT1	scl16414.9.494_144	XM_203753.2			38050427	XM_203753.2	Fvt1		ILMN_2692262	004290593	S	1892	ACCTGAAGTTCACATTCCATTTCAGCTCAGTTCCTAGTGCTTATCGCTCT										
Mus musculus	RefSeq	ILMN_199228	ILMN_199228	LOC217341	XM_126800.2	XM_126800.2			38091991	XM_126800.2	LOC217341		ILMN_2534497	004120377	S	5329	AGTCTGCAGGGTAGCCAACAGGGGCTGAACATGCACATTGACGTGCCTCC										
Mus musculus	RefSeq	ILMN_217846	ILMN_217846	RBL1	NM_011249.1	NM_011249.1		19650	33859601	NM_011249.1	Rbl1	NP_035379.1	ILMN_2688306	004890291	S	4469	GCAGTCTAGCTCAGCATGTCTAACATATCCAGTGCTGGCTAATTTGAACG	2	-	156971979-156972028	2qH1	Mus musculus retinoblastoma-like 1 (p107) (Rbl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p107; PRB1; AW547426	p107; PRB1; AW547426
Mus musculus	MEEBO	ILMN_220251	ILMN_220251	CART	scl43607.3.1_1	NM_013732.3			42476056	NM_013732.3	Cart		ILMN_2719755	002650041	S	385	AAGTGCTTGTGAAGGGACGACAGCCGCCACCTTCGGTTCCCATATTCCCT										
Mus musculus	Riken	ILMN_202134	ILMN_202134	FMN2	ri|2900024F01|ZX00068N11|AK013585|1536					AK013585	Fmn2		ILMN_1214139	002190367	S	1203	AAGGATGTTCTTGCACATAGATGGTTCAATGGCATGGTGGGTGATGAGCC						The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The cell cycle process whereby the directed movement of chromosomes from the center of the spindle towards the spindle poles takes place, mediated by the shortening of microtubules attached to the chromosomes. This occurs during meiosis [goid 16344] [evidence IMP]; Progression through metaphase of meiosis I; analogous to mitotic metaphase [goid 7132] [evidence IMP]; The cell cycle process whereby the directed movement of the meiotic spindle to a specific location in the cell occurs [goid 51295] [evidence IMP]; The cell cycle process whereby two small cells are generated, as byproducts destined to degenerate, as a result of the first and second meiotic divisions of a primary oocyte during its development to a mature ovum. One polar body is formed in the first division of meiosis and the other in the second division; at each division, the cytoplasm divides unequally, so that the polar body is of much smaller size than the developing oocyte. At the second division in which a polar body is formed, the polar body and the developing oocyte each contain a haploid set of chromosomes [goid 40038] [evidence IMP]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	Riken	ILMN_206744	ILMN_206744	TCF7L2	ri|D330006H21|PX00191A06|AK084488|2687					AK084488	Tcf7l2		ILMN_1231177	001400148	S	2585	TCCTCCCCAAAAGCCAGGAATGGCCTCCAGCTGAGAAGAGACAGCCCCTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 30538] [evidence IGI]; The process by which the anatomical structures of the hindgut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48619] [evidence IGI]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216781	ILMN_216781	MIER3	NM_172593.2	NM_172593.2		218613	142388120	NM_172593.2	Mier3	NP_766181.1	ILMN_1260241	004180092	S	3701	GCCCATTCTCTTTGGCTGGCACAGTTTATCTATGCATCGCTGGGGTCTTG	13	+	112507302-112507351	13qD2.2	Mus musculus mesoderm induction early response 1, family member 3 (Mier3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	D130064H19Rik; 5730509D14; MGC117989; AU015422	D130064H19Rik; 5730509D14; MGC117989; AU015422
Mus musculus	RefSeq	ILMN_197210	ILMN_197210	LOC269251	XM_193262.3	XM_193262.3			38074596	XM_193262.3	LOC269251		ILMN_1243988	005550286	S	677	AATTCCAGGGTGAATGGACCACACCAGCTCCCACAGCGCAGGCCACGGAG										
Mus musculus	MEEBO	ILMN_193186	ILMN_193186	MJ-500-51_69	MJ-500-51_69						MJ-500-51_69		ILMN_2494825	000620722	S	4	GAGTTATAATTTGAGAATACCACATCAACCCGCCCCATAAGACATAGGCG										
Mus musculus	MEEBO	ILMN_222659	ILMN_222659	MAP3K13	scl49321.4.1_16	NM_172821.1			27370227	NM_172821.1	Map3k13		ILMN_2753046	003460280	S	3805	CCTTGCCAGACCAATTTCAAGCTTCAGGACATACTGCGAGATGAATGGCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]		
Mus musculus	Riken	ILMN_203888	ILMN_203888	A630084D02RIK	ri|A630084D02|PX00147O11|AK042346|2195					AK042346	A630084D02Rik		ILMN_1251193	001050138	S	1853	TTGGGACAATACAGAGAAGATTAGCGTGGCCCCTGCGCAAGGATGACACG										
Mus musculus	Riken	ILMN_205345	ILMN_205345	A730069A04RIK	ri|A730069A04|PX00151H24|AK043199|2279					AK043199	A730069A04Rik		ILMN_1243595	006940301	S	2103	TCACCAGAAACAGAGACACAGAGAGAGAGACATGCAGTAGGGGCAGGCAC										
Mus musculus	RefSeq	ILMN_196699	ILMN_196699	LOC236260	XM_142805.4	XM_142805.4			38096260	XM_142805.4	LOC236260		ILMN_1245507	005420689	S	1181	CTGGAGAGAAACCCAAGAATGTAATCAATGTGTCATCTGCAACGTCAGAA										
Mus musculus	RefSeq	ILMN_258436	ILMN_258436	PRKCE	NM_011104.1	NM_011104.1		18754	6755083	NM_011104.1	Prkce	NP_035234.1	ILMN_2993204	007650341	S	1962	CTGTGTGGCAGCGCAGAACGGGGAGGACGCCATCAAGCAACATCCATTCT	17	+	87029439-87029488	17qE4	Mus musculus protein kinase C, epsilon (Prkce), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IMP]; Behavior that is dependent upon the sensation of chemicals [goid 7635] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol but not calcium [goid 4699] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	Pkce; R75156; PKC[e]; 5830406C15Rik; PKCepsilon	Pkce; R75156; PKC[e]; 5830406C15Rik; PKCepsilon
Mus musculus	MEEBO	ILMN_188443	ILMN_188443	2610019E17RIK	scl51012.2.1_3						2610019E17Rik		ILMN_2452717	002470309	S	19	CTAGAGATCCAACGAGTAGGAGTGTTGGCTGGTAAGCTGGGCATCCGTGT										
Mus musculus	RefSeq	ILMN_261287	ILMN_261287	CHM	NM_018818.2	NM_018818.2		12662	110681713	NM_018818.2	Chm	NP_061288.2	ILMN_3151210	000870709	A	1777	GCTCTGGCCCTGACTGTAATCTAGGAAATGATAATGCAGTCCAACAGGCG	X	-	110157241-110157244:110160945-110160990	XqE1	Mus musculus choroidermia (Chm), mRNA.	A heterodimeric enzyme complex, which in mammals is composed of an alpha and a beta subunit, and which associates with an accessory protein Rep (Rab escort protein). Catalyzes of the transfer of a geranyl-geranyl moiety from geranylgeranyl pyrophosphate to a Rab protein [goid 5968] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IEA]	Rep-1	Rep-1
Mus musculus	RefSeq	ILMN_261287	ILMN_261287	CHM	NM_018818.2	NM_018818.2		12662	110681713	NM_018818.2	Chm	NP_061288.2	ILMN_3072377	000290286	I	517	GGAGCTGTGAACTACCTGCAGAACAAAGTCAGTGCACGGGGCCAGAGAGT	X	-	110229813-110229862	XqE1	Mus musculus choroidermia (Chm), mRNA.	A heterodimeric enzyme complex, which in mammals is composed of an alpha and a beta subunit, and which associates with an accessory protein Rep (Rab escort protein). Catalyzes of the transfer of a geranyl-geranyl moiety from geranylgeranyl pyrophosphate to a Rab protein [goid 5968] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IEA]	Rep-1	Rep-1
Mus musculus	RefSeq	ILMN_189360	ILMN_261287	CHM	NM_018818.2	NM_018818.2		12662	110681713	NM_018818.2	Chm	NP_061288.2	ILMN_2460590	000840064	S	4271	GTATTATAAAACCTTACAACACAATGTTTGCTGTTTTACACAATGCAAAC	X	-	110154747-110154796	XqE1	Mus musculus choroidermia (Chm), mRNA.	A heterodimeric enzyme complex, which in mammals is composed of an alpha and a beta subunit, and which associates with an accessory protein Rep (Rab escort protein). Catalyzes of the transfer of a geranyl-geranyl moiety from geranylgeranyl pyrophosphate to a Rab protein [goid 5968] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IEA]	Rep-1	Rep-1
Mus musculus	RefSeq	ILMN_213363	ILMN_213363	MCTS2	NM_025543.2	NM_025543.2		66405	142366629	NM_025543.2	Mcts2	NP_079819.1	ILMN_2636315	001010379	S	676	GACACAATACACCTGAGCTAAATATAAATATTGCGTTGTATCTCTGTGTG	2	+	152513559-152513608	2qH1	Mus musculus malignant T cell amplified sequence 2 (Mcts2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	2400002F11Rik; MGC41042; RP23-35I8.12	2400002F11Rik; MGC41042; RP23-35I8.12
Mus musculus	RefSeq	ILMN_188613	ILMN_188613	TUSC4	NM_018879.1	NM_018879.1		56032	9256542	NM_018879.1	Tusc4	NP_061367.1	ILMN_2454195	004640333	S	1373	GGAGCTAGACAAGTATGGTTGTACATATGGTCTGGAGGGTGAGACTCGGT	9	+	107447969-107448018	9qF1	Mus musculus tumor suppressor candidate 4 (Tusc4), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		NPR2L; 2810446G01Rik; G21; NPRL2	NPR2L; 2810446G01Rik; G21; NPRL2
Mus musculus	RefSeq	ILMN_209715	ILMN_209715	SNCG	NM_011430.1	NM_011430.1		20618	6755591	NM_011430.1	Sncg	NP_035560.1	ILMN_2939277	001570593	S	373	CCCCTGCACAGGACCAAGAAGCCAAAGAGCAAGAGGAGAATGAAGAGGCC	14	-	33199656-33199657:33199949-33199996	14qB	Mus musculus synuclein, gamma (Sncg), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IGI]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IGI]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	persyn; C79089	persyn; C79089
Mus musculus	MEEBO	ILMN_223392	ILMN_223392	NTAN1	scl49405.9.1_2	NM_010946.2			31981589	NM_010946.2	Ntan1		ILMN_1254516	000160452	S	843	CTCCTCTGGCCGAGCCCCCCCACTTTGTTGAACATATTAGATCTACCTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA];  [goid 8418] [evidence IDA]		
Mus musculus	RefSeq	ILMN_226678	ILMN_226678	SORBS1	NM_001034964.1	NM_001034964.1		20411	78000153	NM_001034964.1	Sorbs1	NP_001030136.1	ILMN_3027751	001690044	I	1421	GCCGATATTGCAGCTCGCCGCCACACAGGTGTCATCCCGACTCATCATCA	19	-	40396355-40396404	19qC3	Mus musculus sorbin and SH3 domain containing 1 (Sorbs1), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; An adherens junction which connects a cell to the extracellular matrix [goid 5924] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts [goid 43149] [evidence IDA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the insulin receptor [goid 5158] [evidence IDA]	SH3P12; 2310065E01Rik; Sh3d5; mKIAA1296; CAP; 9530001P15Rik	SH3P12; 2310065E01Rik; Sh3d5; mKIAA1296; CAP; 9530001P15Rik
Mus musculus	Riken	ILMN_204118	ILMN_204118	COL5A2	ri|B230306G11|PX00158D24|AK080811|1755					AK080811	Col5a2		ILMN_1255413	005360538	S	1414	TCCCTCAGGTTCAGCCACCATCATCCTTTTGGTCTGTTCAGCACTGAGCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]	The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]		
Mus musculus	MEEBO	ILMN_221471	ILMN_221471	2900041A11RIK	scl35192.9.1_49	XM_356202.1			38090161	XM_356202.1	2900041A11Rik		ILMN_2736055	002760022	S	717	GGGTCTTCCTGCAGGCACTACGGCAGCAGAAAGCCAACAAGCAGTAGAAC										
Mus musculus	MEEBO	ILMN_195857	ILMN_195857	MJ-3000-106_2479	MJ-3000-106_2479						MJ-3000-106_2479		ILMN_2519369	005810064	S	19	AGGCTGTTTCAGAAGGGATTGGCTTGGCTTTTGTTACCTTTCCAAAGGCA										
Mus musculus	RefSeq	ILMN_185522	ILMN_248808	OGFRL1	NM_001081079.1	NM_001081079.1		70155	124487292	NM_001081079.1	Ogfrl1	NP_001074548.1	ILMN_2519679	000730242	S	4550	TTAAGATTATTGTATTGTTCTGTGTTTTCCAGATCATTCTCATAGGAAAT	1	-	23373507-23373556	1qA5	Mus musculus opioid growth factor receptor-like 1 (Ogfrl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2210417C17Rik	2210417C17Rik
Mus musculus	RefSeq	ILMN_185522	ILMN_248808	OGFRL1	NM_001081079.1	NM_001081079.1		70155	124487292	NM_001081079.1	Ogfrl1	NP_001074548.1	ILMN_2427727	006550576	S	2631	GAAATTGAGAACAGTTTGAAGTTATATATACCGACTTTAAGTAAATATTA	1	-	23375426-23375475	1qA5	Mus musculus opioid growth factor receptor-like 1 (Ogfrl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2210417C17Rik	2210417C17Rik
Mus musculus	RefSeq	ILMN_248808	ILMN_248808	OGFRL1	NM_001081079.1	NM_001081079.1		70155	124487292	NM_001081079.1	Ogfrl1	NP_001074548.1	ILMN_3145814	005720440	A	568	CTACGAGAAGCTGGAGCACAACCACACGTACATCCAATGGCTTTTCCCCC	1	-	23382882-23382893:23383010-23383047	1qA5	Mus musculus opioid growth factor receptor-like 1 (Ogfrl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2210417C17Rik	2210417C17Rik
Mus musculus	RefSeq	ILMN_210448	ILMN_210448	KRTCAP2	NM_025327.2	NM_025327.2		66059	142382643	NM_025327.2	Krtcap2	NP_079603.1	ILMN_2605694	000510564	S	430	CAGCTCCAGTTCTCACACCGGCCAAAATCACTGGCAAGGGCAAGAAGAGA	3	+	89053558-89053607	3qF1	Mus musculus keratinocyte associated protein 2 (Krtcap2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected [goid 8250] [evidence IDA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [evidence IC ]	Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [evidence IC ]	Kcp2; 0610010I12Rik	Kcp2; 0610010I12Rik
Mus musculus	RefSeq	ILMN_232639	ILMN_232639	INA	NM_146100.2	NM_146100.2		226180	34328367	NM_146100.2	Ina	NP_666212.2	ILMN_2836494	004150278	S	2521	CTCTGAAGGGGAAGAACAAGGTCTCCTCTGTGTTGGGTTCCATGTAGTGG	19	+	47077923-47077971	19qC3	Mus musculus internexin neuronal intermediate filament protein, alpha (Ina), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter [goid 5883] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	NF-66; AV028420; MGC25352	NF-66; AV028420; MGC25352
Mus musculus	RefSeq	ILMN_184540	ILMN_184540	TOP1	NM_009408.2	NM_009408.2		21969	112734854	NM_009408.2	Top1	NP_033434.2	ILMN_1232251	006400019	S	2480	TTGCCTTGGGGACCTCCAAACTCAATTATCTGGACCCTAGGATCACAGTG	2	+	160546758-160546807	2qH2	Mus musculus topoisomerase (DNA) I (Top1), mRNA.	The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]	Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IDA]; Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IDA]; Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA [goid 3916] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IEA]	D130064I21Rik; AI467334; Top-1	D130064I21Rik; AI467334; Top-1
Mus musculus	RefSeq	ILMN_184540	ILMN_184540	TOP1	NM_009408.2	NM_009408.2		21969	112734854	NM_009408.2	Top1	NP_033434.2	ILMN_2521065	006900725	S	2448	TCAAGCCACAGATCGAGAGGAGAACAAACAAATTGCCTTGGGGACCTCCA	2	+	160546726-160546775	2qH2	Mus musculus topoisomerase (DNA) I (Top1), mRNA.	The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]	Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IDA]; Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IDA]; Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA [goid 3916] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IEA]	D130064I21Rik; AI467334; Top-1	D130064I21Rik; AI467334; Top-1
Mus musculus	Riken	ILMN_204124	ILMN_204124	CLTA	ri|B130050B18|PX00158H09|AK045237|2884					AK045237	Clta		ILMN_1257489	001510204	S	2403	CCTGCTGCTTGAGGGCGAGTTTAGGCGATTTATGTAACGACTGTCACGGC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex [goid 30132] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216957	ILMN_216957	9530077C05RIK	NM_026739.1	NM_026739.1		68283	46810272	NM_026739.1	9530077C05Rik	NP_081015.1	ILMN_2833152	003360131	S	1959	CTGTGAACTTGGGCACCAAGGCCAGCTCTGGATTGGAGGTGGCCAGTCTA	9	+	22248925-22248974	9qA3	Mus musculus RIKEN cDNA 9530077C05 gene (9530077C05Rik), mRNA.				1110003N12Rik; KIAA0895; mKIAA0895	1110003N12Rik; KIAA0895; mKIAA0895
Mus musculus	RefSeq	ILMN_214442	ILMN_214442	SFRS4	NM_020587.1	NM_020587.1		57317	10181125	NM_020587.1	Sfrs4	NP_065612.1	ILMN_2944150	005910424	S	1358	GAGCTCAGCCGTCTGCCCTTGAATCGATGCCCTTTGATGTGTGCCACGTA	4	+	131457306-131457355	4qD2.3	Mus musculus splicing factor, arginine/serine-rich 4 (SRp75) (Sfrs4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MNCb-2616; 5730499P16Rik; AW550192	MNCb-2616; 5730499P16Rik; AW550192
Mus musculus	RefSeq	ILMN_259883	ILMN_259883	IFT88	NM_009376.1	NM_009376.1		21821	6678332	NM_009376.1	Ift88	NP_033402.1	ILMN_2949869	002680176	S	2431	CCTACGTGGATCCACTGGGCCCTCAGATAGAAAGACCAAAAACTGCAGCC	14	+	58136180-58136229	14qC3	Mus musculus intraflagellar transport 88 homolog (Chlamydomonas) (Ift88), mRNA.	The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]	The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IGI]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42487] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45862] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	polaris; Tg737; Ttc10; TgN737Rpw; Tg737Rpw; flexo; AW552028; fxo; orpk	polaris; Tg737; Ttc10; TgN737Rpw; Tg737Rpw; flexo; AW552028; fxo; orpk
Mus musculus	RefSeq	ILMN_213946	ILMN_213946	FRAT2	NM_177603.1	NM_177603.1		212398	29243969	NM_177603.1	Frat2	NP_808271.1	ILMN_2824002	004780255	S	1858	AGGGCGCCTCTCCTGCTAAACCTGTCAGTTCTTGGTGAGTGACTGAAACT	19	-	41899536-41899585	19qC3	Mus musculus frequently rearranged in advanced T-cell lymphomas 2 (Frat2), mRNA.		The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]		MGC37615	MGC37615
Mus musculus	RefSeq	ILMN_185117	ILMN_185117	TNFRSF12A	NM_013749.1	NM_013749.1		27279	7305058	NM_013749.1	Tnfrsf12a	NP_038777.1	ILMN_2424299	001770541	S	563	AGGGAGCCTTCCAAGGTGTCCAATTGCCCTATCTCTGGGTCTGGGGCAGA	17	-	23812759-23812808	17qA3.3	Mus musculus tumor necrosis factor receptor superfamily, member 12a (Tnfrsf12a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The formation of adhesions that stabilize protrusions at the leading edge of a migrating cell; involves integrin activation, clustering, and the recruitment of structural and signaling components to nascent adhesions [goid 6931] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of axon extension [goid 45773] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	HPIP; TWEAK-R; C87282; Fn14; AI255180; TweakR	HPIP; TWEAK-R; C87282; Fn14; AI255180; TweakR
Mus musculus	RefSeq	ILMN_219697	ILMN_219697	D3BWG0562E	NM_177664.4	NM_177664.4		229791	142369078	NM_177664.4	D3Bwg0562e	NP_808332.2	ILMN_2712316	003850180	S	5015	GAGGGAAGGGTGGACTGGTTTTAGTACTCTGAAGAAAACCCAAGCTGCAG	3	-	117022688-117022737	3qG1	Mus musculus DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed (D3Bwg0562e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]	mKIAA0455; PRG-1; A330086D10	mKIAA0455; PRG-1; A330086D10
Mus musculus	MEEBO	ILMN_194331	ILMN_194331	PROM1	scl019126.1_3				6679478	NM_008935	Prom1		ILMN_2505476	002760167	S	10	GGGGATGTGGCATTTCACTTTATGATAACTTGTCGTTGCTCCTTCCCGCC						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence IDA]				
Mus musculus	RefSeq	ILMN_210710	ILMN_210710	IL22RA2	NM_178258.5	NM_178258.5		237310	142378527	NM_178258.5	Il22ra2	NP_839989.2	ILMN_2608406	004730356	S	633	GGCTGAAATGTACCAGCCCATGTTTGACAGAAGAAGCCCAAGAAGCAAGG	10	+	19352652-19352701	10qA3	Mus musculus interleukin 22 receptor, alpha 2 (Il22ra2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the frequency, rate or extent of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42516] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CRF2-10; Il-22bp; CRF2-s1; CRF2X	CRF2-10; Il-22bp; CRF2-s1; CRF2X
Mus musculus	MEEBO	ILMN_190946	ILMN_190946	B230107K20RIK	scl4434.1.1_13						B230107K20Rik		ILMN_2474684	005260333	S	14	CGTTGTTGTTCACTAAGAATCAGCCTGGGCTTCACTGTCTCTGGGCTCCT										
Mus musculus	MEEBO	ILMN_192092	ILMN_192092	C030002B11RIK	scl38357.2.167_180						C030002B11Rik		ILMN_2484932	002850670	S	18	GCCTGGAGATTGGTTTTCGAACCACGTACCTTTATGCCTCGTGATTGTGA										
Mus musculus	MEEBO	ILMN_191508	ILMN_191508	D930046M13RIK	scl42943.1.780_86						D930046M13Rik		ILMN_1224607	005340114	S	14	CTCCAGTTCGATGCACTGGGGTCCCAAGCTTCCTTGTTAAGTCTGGAAAG										
Mus musculus	RefSeq	ILMN_261259	ILMN_261259	SOX9	NM_011448.2	NM_011448.2		20682	31543760	NM_011448.2	Sox9	NP_035578.2	ILMN_3007428	005670451	S	3518	GTTTGTGGACAAATGAGAGGTTTCAGATGCAGTGAGGAGCACTGAGTCCT	11	+	112603233-112603282	11qE2	Mus musculus SRY-box containing gene 9 (Sox9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The determination of sex and sexual phenotype in a male organism's germ line [goid 19100] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The specification of male sex of an individual organism [goid 30238] [evidence IGI]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	2010306G03Rik; AV220920; KIAA4243; mKIAA4243	2010306G03Rik; AV220920; KIAA4243; mKIAA4243
Mus musculus	RefSeq	ILMN_220490	ILMN_220490	SRGN	NM_011157.2	NM_011157.2		19073	118129990	NM_011157.2	Srgn	NP_035287.1	ILMN_2722732	004610433	S	667	GAATTATGCTTTAATGCTGTTACCTATCTTGTTGTTCTGGAAAATGCCTG	10	-	61957397-61957446	10qB4	Mus musculus serglycin (Srgn), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Coarse, bluish-black staining cytoplasmic granules, bounded by a plasma membrane and found in mast cells and basophils. Contents include histamine, heparin, chondroitin sulfates, chymase and tryptase [goid 42629] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a secretory granule in a mast cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion [goid 33364] [evidence IMP]; A process by which a protease is maintained in a secretory granule in a mast cell and prevented from moving elsewhere [goid 33373] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a secretory granule in a T cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion [goid 33371] [evidence IMP]; A process by which the protease granyme B is maintained in a secretory granule in a T cell and prevented from moving elsewhere [goid 33382] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sgc; Prg; Prg1	Sgc; Prg; Prg1
Mus musculus	RefSeq	ILMN_220490	ILMN_220490	SRGN	NM_011157.2	NM_011157.2		19073	118129990	NM_011157.2	Srgn	NP_035287.1	ILMN_2751527	005490187	S	175	CGAACTGCATCGAGGAGAAGGGACCACAGTTTGACCTAATAGATGAATCC	10	-	61960561-61960610	10qB4	Mus musculus serglycin (Srgn), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Coarse, bluish-black staining cytoplasmic granules, bounded by a plasma membrane and found in mast cells and basophils. Contents include histamine, heparin, chondroitin sulfates, chymase and tryptase [goid 42629] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a secretory granule in a mast cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion [goid 33364] [evidence IMP]; A process by which a protease is maintained in a secretory granule in a mast cell and prevented from moving elsewhere [goid 33373] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a secretory granule in a T cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion [goid 33371] [evidence IMP]; A process by which the protease granyme B is maintained in a secretory granule in a T cell and prevented from moving elsewhere [goid 33382] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sgc; Prg; Prg1	Sgc; Prg; Prg1
Mus musculus	Riken	ILMN_204845	ILMN_204845	A130024K02RIK	ri|A130024K02|PX00122I11|AK037544|1731					AK037544	A130024K02Rik		ILMN_2568051	002650451	S	1104	GTGAGGTGGCCTGCAGAGTAAATTACATGATGACCAAAAGGGGCAGGGGG										
Mus musculus	RefSeq	ILMN_198291	ILMN_198291	LOC225416	XM_140295.3	XM_140295.3			38083673	XM_140295.3	LOC225416		ILMN_2531162	005090193	S	54	GGCAGCCTCCTTCAAAAAGTCCAGGAAGCTGATAGTCTCCAAATGGGTGA										
Mus musculus	RefSeq	ILMN_199140	ILMN_259913	TRAPPC1	NM_001024206.1	NM_001024206.1		245828	66730564	NM_001024206.1	Trappc1	NP_001019377.1	ILMN_1213711	004280482	S	520	GGCTGAAACATCTACCTCACCCCTCAGAAGAACCTGTGACTGCCTGGGCC	11	+	69139064-69139069:69139070-69139113	11qB3	Mus musculus trafficking protein particle complex 1 (Trappc1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IEA]; A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BET5; MUM2; D11Ertd172e	BET5; MUM2; D11Ertd172e
Mus musculus	RefSeq	ILMN_259913	ILMN_259913	TRAPPC1	NM_001024206.1	NM_001024206.1		245828	66730564	NM_001024206.1	Trappc1	NP_001019377.1	ILMN_2943661	004570037	S	660	AGAATGAAGCTCACAGGAGTCTACGCCAGTTTTATCCCTGCTTGACTCTG	11	+	69139204-69139253	11qB3	Mus musculus trafficking protein particle complex 1 (Trappc1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IEA]; A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BET5; MUM2; D11Ertd172e	BET5; MUM2; D11Ertd172e
Mus musculus	RefSeq	ILMN_241519	ILMN_241519	AU021838	NM_001037746.2	NM_001037746.2		328099	142351405	NM_001037746.2	AU021838	NP_001032835.1	ILMN_3160212	001850678	S	1625	CTGAGCGTCCTTACACATAGTTCAGTGGTTGAGCATCCTGTAAGGCAGGG	12	+	58340774-58340823	12qC1	Mus musculus expressed sequence AU021838 (AU021838), mRNA.				AW536152; Prps1; MGC117905; 6720461H18	AW536152; Prps1; MGC117905; 6720461H18
Mus musculus	RefSeq	ILMN_223156	ILMN_223156	SLC5A11	NM_146198.2	NM_146198.2		233836	118130211	NM_146198.2	Slc5a11	NP_666310.1	ILMN_1215657	003420739	S	2134	GTGGCTCTGTGGGATGGAAAAGAACAAAGAGGAGCCCCCAAGCAAAGCGG	7	+	130416558-130416607	7qF3	Mus musculus solute carrier family 5 (sodium/glucose cotransporter), member 11 (Slc5a11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC25910; RKST2; Kst1; Slc5a10; SMIT2; 2010013B02Rik	MGC25910; RKST2; Kst1; Slc5a10; SMIT2; 2010013B02Rik
Mus musculus	RefSeq	ILMN_197041	ILMN_197041	GM46	XM_112098.3	XM_112098.3		194604	94393116	XM_112098.3	Gm46	XP_112098.2	ILMN_1238600	000540639	S	1061	AGCTGGCTGTGAGTGAGGATGGAGAGGGAGAGGATGTCTCCAACAGCCGT	12	-	104907253-104907302	12qE	PREDICTED: Mus musculus gene model 46, (NCBI) (Gm46), mRNA.					
Mus musculus	RefSeq	ILMN_212202	ILMN_315499	LOC100048684	XM_001480823.1	XM_001480823.1		100048684	149249720	XM_001480823.1	LOC100048684	XP_001480873.1	ILMN_2623912	000010215	S	1986	CAAGGTGCTCAACTAGAAGCCACTGAGGGCAAATGTCACACGACTTGTCC					PREDICTED: Mus musculus similar to Astacin-like metalloendopeptidase precursor (Oocyte astacin) (Ovastacin) (LOC100048684), mRNA.					
Mus musculus	Riken	ILMN_205991	ILMN_205991	CACNA1A	ri|D630007D18|PX00196J21|AK052625|1150					AK052625	Cacna1a		ILMN_1212985	005700608	S	905	CCTCAGGGGACAAAGCTCCAGAAAGGACAGACAAGGACATTGGTCCTCCC						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]	The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; The release of a neurotransmitter into the synaptic cleft, where the release step is dependent on the presence of calcium ions (Ca2+). The neurotransmitter is contained within a membrane-bounded vesicle, and is released by fusion of the vesicle with the presynaptic plasma membrane of a nerve cell [goid 48791] [evidence IMP]; The regulated release of gamm-aminobutyric acid by a cell or group of cells. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues [goid 14051] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellum to attain its fully functional state. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21590] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of acetylcholine [goid 14056] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of acetylcholine [goid 14056] [evidence IMP]; The process whereby neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21522] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 51932] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones [goid 32353] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process involved in the generation of rhythmic, synchronous synaptic inputs in a neural circuit [goid 60024] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21680] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; The process whose specific outcome is the progression of the cerebellar molecular layer nerve over time, from its formation to the mature structure. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells [goid 21679] [evidence IMP]; The process whose specific outcome is the progression of the vestibular nucleus over time, from its formation to the mature structure [goid 21750] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IGI]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; Involuntary movement caused by the application of a stimulus to an organism and a subsequent movement. The signal processing of this movement takes place in the spinal cord [goid 50883] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The chemical reactions and pathways involving amino acids containing sulfur, comprising cysteine, homocysteine, methionine and selenocysteine [goid 96] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis [goid 17158] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; The regulation of the levels, transport, and metabolism of chloride ions within a cell or between a cell and its external environment [goid 30644] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]	Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IGI]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_193809	ILMN_193809	4833412C05RIK	scl31219.5.1_70						4833412C05Rik		ILMN_2500636	002000768	S	6	GTGTCAATGCCATGTAGCCTTTCACGCTATTCCATCAGCTTGGTCCAGAG										
Mus musculus	RefSeq	ILMN_210907	ILMN_210907	GDAP2	NM_010269.2	NM_010269.2		14547	142367633	NM_010269.2	Gdap2	NP_034399.1	ILMN_2610414	001690253	S	2733	CTCAGAGGTAACATAAAGATAGGATTTAGAAAGAACCTGGCTTTTCCAGG	3	+	100010766-100010815	3qF2.2	Mus musculus ganglioside-induced differentiation-associated-protein 2 (Gdap2), mRNA.				D3Ertd801e; C77050	D3Ertd801e; C77050
Mus musculus	RefSeq	ILMN_255526	ILMN_255526	EG432986	NR_002869.1	NR_002869.1		432986	84872165	NR_002869.1	EG432986		ILMN_2975698	007570270	S	551	TCAGCAACAGTTTAGGCCTGGGTGGAGGCAGCAGCCATGTCCTTGGAGAT	15	+	101440744-101440793	15qF2	Mus musculus predicted gene, EG432986 (EG432986), non-coding RNA.				Kb16p	Kb16p
Mus musculus	RefSeq	ILMN_208924	ILMN_208924	2810006K23RIK	NM_028310.1	NM_028310.1		72650	33859719	NM_028310.1	2810006K23Rik	NP_082586.1	ILMN_2941081	006900521	S	1437	CACTGAGTGTGGTGAGTCGCTGTCAGTGAAGGTGTGTCCCCGTCTCAGAC	5	+	124600540-124600589	5qF	Mus musculus RIKEN cDNA 2810006K23 gene (2810006K23Rik), mRNA.		The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code) [goid 6415] [evidence IEA]	Involved in catalyzing the release of a nascent polypeptide chain from a ribosome [goid 3747] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216400	ILMN_216400	GTF3A	NM_025652.1	NM_025652.1		66596	27532948	NM_025652.1	Gtf3a	NP_079928.1	ILMN_2827311	003940605	S	814	GGCAAGGCTGCGGAAGAACCTACACAACCGTGTTCAACCTGCAGAGCCAC	5	+	147264303-147264352	5qG3	Mus musculus general transcription factor III A (Gtf3a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	5330403M05Rik; 2610111I01Rik; 2010015D03Rik	5330403M05Rik; 2610111I01Rik; 2010015D03Rik
Mus musculus	MEEBO	ILMN_188579	ILMN_188579	SCL000162.1_106	scl000162.1_106	BC051034.1			29835215	BC051034.1	scl000162.1_106		ILMN_2453886	003710021	S	15	GTGTGAGCCAGCCTCTGTGGAGAATGGAGTGGGCAAGAAATCACCCGGAC										
Mus musculus	RefSeq	ILMN_251877	ILMN_251877	TFB2M	NM_008249.2	NM_008249.2		15278	84490372	NM_008249.2	Tfb2m	NP_032275.2	ILMN_2874071	005050575	S	2203	AAGTCCCAGGCCTTGTGAGGTGGAGGGCCCATCAGTTTAATGCCACTTTC	1	-	181364926-181364975	1qH4	Mus musculus transcription factor B2, mitochondrial (Tfb2m), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor [goid 179] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule [goid 8649] [evidence IEA]	Hkp1	Hkp1
Mus musculus	RefSeq	ILMN_223264	ILMN_223264	KIF2A	NM_008442.1	NM_008442.1		16563	6680559	NM_008442.1	Kif2a	NP_032468.1	ILMN_2764587	001030564	S	884	GAAAATCCAATTGTGTGAAAGAAGTAGAAAAATTGCAAGAAAAACGAGAA	13	-	107777392-107777441	13qD2.1	Mus musculus kinesin family member 2A (Kif2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	M-kinesin; Kns2; Kif2	M-kinesin; Kns2; Kif2
Mus musculus	RefSeq	ILMN_223264	ILMN_223264	KIF2A	NM_008442.1	NM_008442.1		16563	6680559	NM_008442.1	Kif2a	NP_032468.1	ILMN_2761635	000940291	S	2596	CTACAAGAAGAAGAGCAAGCAAGCAAGCAAATTAACCCCAAGAGGCCCCG	13	-	107752227-107752276	13qD2.1	Mus musculus kinesin family member 2A (Kif2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	M-kinesin; Kns2; Kif2	M-kinesin; Kns2; Kif2
Mus musculus	RefSeq	ILMN_223264	ILMN_223264	KIF2A	NM_008442.1	NM_008442.1		16563	6680559	NM_008442.1	Kif2a	NP_032468.1	ILMN_2781689	003180132	S	3038	GCAAGACTGAGCAATTTTGAACCCTTTGCGTGCATGCATACCTCATGAGT	13	-	107751785-107751834	13qD2.1	Mus musculus kinesin family member 2A (Kif2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	M-kinesin; Kns2; Kif2	M-kinesin; Kns2; Kif2
Mus musculus	RefSeq	ILMN_199015	ILMN_256883	LOC212446	XR_003767.1	XR_003767.1		212446	94389167	XR_003767.1	LOC212446		ILMN_1219331	003290176	S	979	ACTGCTATGGCATGGGAATATCGGTTGACAGCGCAGCAGCCATAACAGAC					PREDICTED: Mus musculus similar to Pyruvate dehydrogenase E1 component alpha subunit, somatic form, mitochondrial precursor (PDHE1-A type I) (LOC212446), mRNA.					
Mus musculus	MEEBO	ILMN_195860	ILMN_195860	AI849053	scl21982.2_107						AI849053		ILMN_2519402	000050301	S	19	AGTCAAAATAAAATATATAAGTGTAATTAAATTCATTCAGATCCCTGTCC										
Mus musculus	RefSeq	ILMN_217455	ILMN_217455	RET	NM_009050.2	NM_009050.2		19713	124256483	NM_009050.2	Ret	NP_033076.2	ILMN_2683393	001260451	S	3895	GTGTATATGCTAACTGGATGGTTTCACCCTCAGCGGCAAAATTAATGGAC	6	-	118103885-118103934	6qF1	Mus musculus ret proto-oncogene (Ret), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation [goid 48484] [evidence IMP]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IDA]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IGI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence TAS]	RET51; PTC; RET9; c-Ret	RET51; PTC; RET9; c-Ret
Mus musculus	RefSeq	ILMN_185123	ILMN_243125	LOC674195	XM_001052064.2	XM_001052064.2		674195	149253041	XM_001052064.2	LOC674195	XP_001052064.2	ILMN_2465775	005570519	S	3196	CCGTCTAGAGACAAGATCTGCTAACCCAGCCTTTATTTAACCTATACTCA					PREDICTED: Mus musculus similar to ubiquitin specific protease 48 (LOC674195), mRNA.					
Mus musculus	RefSeq	ILMN_193474	ILMN_243125	LOC674195	XM_001052064.2	XM_001052064.2		674195	149253041	XM_001052064.2	LOC674195	XP_001052064.2	ILMN_2497526	001740259	S	5135	ACTGTTAACCTTTCTGCCAAATTAAAGACACTTGTGTCTCTGTTTCCACG					PREDICTED: Mus musculus similar to ubiquitin specific protease 48 (LOC674195), mRNA.					
Mus musculus	RefSeq	ILMN_185123	ILMN_243125	LOC674195	XM_001052064.2	XM_001052064.2		674195	149253041	XM_001052064.2	LOC674195	XP_001052064.2	ILMN_2505096	006840491	S	1425	GTCTTCCTTGCGTAGCTGGCGCCAGCTGGCTCTTGAACAACTAGATGAGC					PREDICTED: Mus musculus similar to ubiquitin specific protease 48 (LOC674195), mRNA.					
Mus musculus	RefSeq	ILMN_218609	ILMN_218609	PPIB	NM_011149.2	NM_011149.2		19035	71774132	NM_011149.2	Ppib	NP_035279.2	ILMN_1245092	002120215	S	790	GGGTCCTGTCAATCCCCACACAGACGAAGGTAGCCAGTCACAAGGTTCTG	9	+	65914266-65914315	9qC	Mus musculus peptidylprolyl isomerase B (Ppib), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	CyP-20b; AA408962; AA553318; Cphn-2; AI844835; Cphn2	CyP-20b; AA408962; AA553318; Cphn-2; AI844835; Cphn2
Mus musculus	RefSeq	ILMN_217207	ILMN_238122	SEC14L1	NM_028777.2	NM_028777.2		74136	142371946	NM_028777.2	Sec14l1	NP_083053.1	ILMN_2680308	001300017	S	2439	GAGAGCATCTTTAAGAGCTCAAAGCACACAACTGCACACTCACAGGCCCT	11	+	117020229-117020278	11qE2	Mus musculus SEC14-like 1 (S. cerevisiae) (Sec14l1), mRNA.				1200017E04Rik; 2810012L19Rik	1200017E04Rik; 2810012L19Rik
Mus musculus	RefSeq	ILMN_199031	ILMN_199031	LOC216036	XM_122042.2	XM_122042.2			38090520	XM_122042.2	LOC216036		ILMN_2533799	003870553	S	544	CCACGCATCCTGCAACACAAATGCCGACGTATTGGTCTGAAGAAGCAACG										
Mus musculus	RefSeq	ILMN_250644	ILMN_250644	BC051628	NM_199312.1	NM_199312.1		332713	40556293	NM_199312.1	BC051628	NP_955016.1	ILMN_2983927	002750133	S	1237	GCTCTCTGAGGAAGATGATACTTTGGGCCTGTTTGGACACCACTGAGGGC	2	+	181152114-181152163	2qH4	Mus musculus cDNA sequence BC051628 (BC051628), mRNA.				1700026M20Rik; MGC58365	1700026M20Rik; MGC58365
Mus musculus	RefSeq	ILMN_220022	ILMN_220022	OLFR446	NM_146295.1	NM_146295.1		258292	22129698	NM_146295.1	Olfr446	NP_666407.1	ILMN_2716580	000730100	S	651	AATCCTGGTGGCCATTCTCGGAATCCACTCAGGGGAGGGTCGCAGAAAGG	6	+	42877882-42877931	6qB2.1	Mus musculus olfactory receptor 446 (Olfr446), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123528; MOR261-12; MGC123529	MGC123528; MOR261-12; MGC123529
Mus musculus	RefSeq	ILMN_192526	ILMN_229558	TMEM87B	NM_028248.2	NM_028248.2		72477	124487302	NM_028248.2	Tmem87b	NP_082524.2	ILMN_1235007	000580438	S	2756	GTGAACGTTTTGCCACGTTCGTGACCAAAGATACCAGGCTGTTGGACATG	2	+	128678131-128678180	2qF1	Mus musculus transmembrane protein 87B (Tmem87b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2810431I02Rik; 2610301K12Rik; AU014804	2810431I02Rik; 2610301K12Rik; AU014804
Mus musculus	RefSeq	ILMN_217083	ILMN_217083	MPPE1	NM_172630.2	NM_172630.2		225651	142365099	NM_172630.2	Mppe1	NP_766218.1	ILMN_2733214	007050671	S	331	CTTCCTGCCACCGCTCGGTGTAGCTGCGACTTCCTGGAGGCGCCGCCGTC	18	-	67405104-67405153	18qE1	Mus musculus metallophosphoesterase 1 (Mppe1), mRNA. XM_001001219	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	A530095G11	A530095G11
Mus musculus	RefSeq	ILMN_209395	ILMN_209395	KCNN2	NM_080465.2	NM_080465.2		140492	118131090	NM_080465.2	Kcnn2	NP_536713.1	ILMN_2595430	006560630	S	1581	CAGACAGCAGCAAAGGGACTTCATTGAGACACAGATGGAGAACTACGACA	18	+	45845072-45845121	18qC	Mus musculus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (Kcnn2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 16286] [evidence ISO]	SK2; SKCA2	SK2; SKCA2
Mus musculus	RefSeq	ILMN_209395	ILMN_209395	KCNN2	NM_080465.2	NM_080465.2		140492	118131090	NM_080465.2	Kcnn2	NP_536713.1	ILMN_1223088	006250064	S	734	CCACCGCAGATGTGGATATTATTTTATCTATACCAATGTTCTTAAGGCTC	18	+	45751826-45751875	18qC	Mus musculus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (Kcnn2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 16286] [evidence ISO]	SK2; SKCA2	SK2; SKCA2
Mus musculus	RefSeq	ILMN_217924	ILMN_226175	MCOLN2	NM_001005846.2	NM_001005846.2		68279	91754183	NM_001005846.2	Mcoln2	NP_001005846.1	ILMN_2689401	001050184	S	1862	TGTCCTGCTGAATTGTGGAACCAGAAGGAGGGGTGTCCATGAGCTGCTGA	3	+	145857846-145857895	3qH2	Mus musculus mucolipin 2 (Mcoln2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	3300002C04Rik; TRPML2; C86638; AI549968	3300002C04Rik; TRPML2; C86638; AI549968
Mus musculus	RefSeq	ILMN_213004	ILMN_213004	CBLN3	NM_019820.3	NM_019820.3		56410	118130579	NM_019820.3	Cbln3	NP_062794.1	ILMN_1242272	004180204	S	1852	GCATAGCAGTCAACGTTTTTAAAGTGCTATAATATAAAGTACTCGTGCTA	14	-	56500578-56500627	14qC3	Mus musculus cerebellin 3 precursor protein (Cbln3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_213004	ILMN_213004	CBLN3	NM_019820.3	NM_019820.3		56410	118130579	NM_019820.3	Cbln3	NP_062794.1	ILMN_2632532	000240730	S	4549	CTGACCTATTAGACTTGCAATTCCATTTAAATGTTCAGGAGAATTTAATT	14	-	56497881-56497930	14qC3	Mus musculus cerebellin 3 precursor protein (Cbln3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_190694	ILMN_190694	TRAF4	NM_009423.2	NM_009423.2		22032	31543888	NM_009423.2	Traf4	NP_033449.2	ILMN_2472451	001260730	S	8	GAACTACGTGCGGGATGATGCGGTTTTCATCCGTGCCTCTGTCGAACTGC	11	-	77981665-77981714	11qB5	Mus musculus Tnf receptor associated factor 4 (Traf4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract [goid 30323] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A530032M13Rik; CART1	A530032M13Rik; CART1
Mus musculus	RefSeq	ILMN_190694	ILMN_190694	TRAF4	NM_009423.2	NM_009423.2		22032	31543888	NM_009423.2	Traf4	NP_033449.2	ILMN_2801652	005810593	S	3832	GCACCGGCTTCCAGCTGGTCCCTAAGAGGGCTTGACTGAACTGCATATAA	11	-	77973729-77973778	11qB5	Mus musculus Tnf receptor associated factor 4 (Traf4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract [goid 30323] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A530032M13Rik; CART1	A530032M13Rik; CART1
Mus musculus	Riken	ILMN_205668	ILMN_205668	C130021K03RIK	ri|C130021K03|PX00168N07|AK047916|3649					AK047916	C130021K03Rik		ILMN_1222149	004730438	S	3524	AGTAGGGCTAGAATGTATCTCAGTTTTTAGACTGTTCTTGCCAGTGGGCC										
Mus musculus	MEEBO	ILMN_221130	ILMN_221130	6430527G18RIK	scl00238330.1_63				22003883	NM_145836	6430527G18Rik		ILMN_2731379	000130711	S	2178	AGGATTGCATGAAGGACTTTGGCCGGGGTCTGTCCTCTGGCTTCAAGTAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_252653	ILMN_252653	TUBE1	NM_028006.2	NM_028006.2		71924	110625787	NM_028006.2	Tube1	NP_082282.1	ILMN_3161813	002600475	S	1754	CCTGGGCTACTCGTGCAACAAAAGCCGACGCAGAGGGAAGGAGCAGTCGT	10	+	38869689-38869738	10qB1	Mus musculus epsilon-tubulin 1 (Tube1), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2310061K05Rik; Tube; AI551343	2310061K05Rik; Tube; AI551343
Mus musculus	RefSeq	ILMN_188956	ILMN_188956	TRIM28	NM_011588.2	NM_011588.2		21849	142349667	NM_011588.2	Trim28	NP_035718.1	ILMN_1227225	003310139	S	2997	CCATTGAACCTTCCCAGTGCTGGCCTAAGTTCTCAGGAGCTCTCTGGCCC	7	+	13616145-13616194	7qA1	Mus musculus tripartite motif protein 28 (Trim28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AA408787; KRIP-1; Tif1beta; KAP-1; Tif1b; MGC102100	AA408787; KRIP-1; Tif1beta; KAP-1; Tif1b; MGC102100
Mus musculus	RefSeq	ILMN_189853	ILMN_189853	TRIM34	NM_030684.1	NM_030684.1		94094	13507606	NM_030684.1	Trim34	NP_109609.1	ILMN_2504718	000610184	S	15	GTGAAGAGGGCACAGTGTCCTTCCTCAATGTCACCAACCATGGATCACTC	7	+	104203181-104203230	7qE3	Mus musculus tripartite motif protein 34 (Trim34), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189853	ILMN_189853	TRIM34	NM_030684.1	NM_030684.1		94094	13507606	NM_030684.1	Trim34	NP_109609.1	ILMN_2504717	004290128	S	13	CTGTGAAGAGGGCACAGTGTCCTTCCTCAATGTCACCAACCATGGATCAC	7	+	104203179-104203228	7qE3	Mus musculus tripartite motif protein 34 (Trim34), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215179	ILMN_215179	CTTN	NM_007803.4	NM_007803.4		13043	145966811	NM_007803.4	Cttn	NP_031829.2	ILMN_2697431	001710746	S	972	TCAGTCCGAGAGGCAGGACTCCTCCGCTGTGGGGTTTGATTACAAGGAGA				7qF5	Mus musculus cortactin (Cttn), mRNA.	The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ems1; 1110020L01Rik	Ems1; 1110020L01Rik
Mus musculus	RefSeq	ILMN_215179	ILMN_215179	CTTN	NM_007803.4	NM_007803.4		13043	145966811	NM_007803.4	Cttn	NP_031829.2	ILMN_2695664	004390300	S	248	AAAAGGAGCAGAGATGGGGTGCTAAAACCGTGCAGGGATCGGGGCACCAG				7qF5	Mus musculus cortactin (Cttn), mRNA.	The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ems1; 1110020L01Rik	Ems1; 1110020L01Rik
Mus musculus	RefSeq	ILMN_220649	ILMN_224637	ARHGEF5	XM_915627.3	XM_915627.3		54324	149255024	XM_915627.3	Arhgef5	XP_920720.3	ILMN_1222060	006550653	S	5568	GGACAGACCTATGTTACCAGATAGACCTCAGCCCACTCAATGGAGGGAGG				6qB2.1	PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 5 (Arhgef5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_185314	ILMN_185314	UTP14A	scl072554.6_30	XM_135857.4			38086129	XM_135857.4	Utp14a		ILMN_1221442	006130634	S	11	CCTCTAGAGAAGGAGCCATCTTCTTTTGCTCCCATGGAACATGTGTTTCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins [goid 32040] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190011	ILMN_190011	UCHL1	NM_011670.1	NM_011670.1		22223	6755928	NM_011670.1	Uchl1	NP_035800.1	ILMN_1225261	001660215	S	613	GAGAATTCACTGAGCGCGAGCAGGGGGAGGTCCGCTTCTCTGCCGTGGCT	5	+	67078108-67078157	5qC3.1	Mus musculus ubiquitin carboxy-terminal hydrolase L1 (Uchl1), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of mitochondria along microtubules in nerve cell axons [goid 19896] [evidence IMP]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IGI]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IMP]	Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IDA]	AW822034; C88048; gad; R75593; PGP9.5	AW822034; C88048; gad; R75593; PGP9.5
Mus musculus	RefSeq	ILMN_215771	ILMN_215771	GRIA4	NM_019691.3	NM_019691.3		14802	118130535	NM_019691.3	Gria4	NP_062665.2	ILMN_2663423	000110437	S	4666	GTGAGCAGCACACATAGCTGCTTCTTTTATCAGTGTTTCATGTACAAGGC	9	-	4418532-4418581	9qA1	Mus musculus glutamate receptor, ionotropic, AMPA4 (alpha 4) (Gria4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus [goid 32281] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Glur4; gluR-C; Glur-4	Glur4; gluR-C; Glur-4
Mus musculus	Riken	ILMN_201683	ILMN_201683	2610021J01RIK	ri|2610021J01|ZX00033L23|AK011506|1047					AK011506	2610021J01Rik		ILMN_1218826	001780386	S	968	GAGCTTTCAGCCGCGTTTTGGGAAATTCGTTAGAGACGGAGCGTGTCATC										
Mus musculus	RefSeq	ILMN_249760	ILMN_249760	P4HA2	NM_011031.1	NM_011031.1		18452	6754969	NM_011031.1	P4ha2	NP_035161.1	ILMN_2789562	005960754	S	1937	AGACTCTGACCAGCTTACACCTGCCCTGGCTCTGGGGGTGTCTTGGCATG	11	+	53944935-53944984	11qB1.3	Mus musculus procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide (P4ha2), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The posttranslational modification of peptidyl-proline to form 4-hydroxy-L-proline; catalyzed by procollagen-proline,2-oxoglutarate-4-dioxygenase [goid 18401] [evidence IDA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2 [goid 4656] [evidence IDA]	C76437; AA407196; P4hl	C76437; AA407196; P4hl
Mus musculus	RefSeq	ILMN_192404	ILMN_314215	LOC100040390	XM_001474599.1	XM_001474599.1		100040390	149273656	XM_001474599.1	LOC100040390	XP_001474649.1	ILMN_2487781	004860408	S	3437	CTTGTTCCTAAGAACTTTTTAGTGCTGTTTTTACATTGTTAAGAACTGAA	Y|NT_166402.1	+	37435-37484		PREDICTED: Mus musculus similar to ubiquitin activating enzyme E1 (LOC100040390), mRNA.					
Mus musculus	RefSeq	ILMN_209120	ILMN_323865	LOC100047113	XM_001477410.1	XM_001477410.1		100047113	149253582	XM_001477410.1	LOC100047113	XP_001477460.1	ILMN_2683408	004280220	S	2085	CCCCGGCCCCGAGGGGCTGCACCAGCGCTCCTGTTCGGTTTCCAGCACTG					PREDICTED: Mus musculus similar to centaurin, gamma 3 (LOC100047113), mRNA.					
Mus musculus	MEEBO	ILMN_192444	ILMN_192444	SNTG1	scl17005.23_9				31560092	NM_027671	Sntg1		ILMN_2488119	000670609	S	16	CCCTTCTTTAAATAGAAGACAGTCGCACATTAGACTCAAGAGGAAAGCTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210478	ILMN_210478	RNF181	NM_025607.3	NM_025607.3		66510	47059205	NM_025607.3	Rnf181	NP_079883.3	ILMN_2682063	003610398	S	1256	ATCTTTCCTGGGGGAAAGGACTTCTGTCCATCCCTGCCCACTGGATCGGA	6	-	72309785-72309834	6qC1	Mus musculus ring finger protein 181 (Rnf181), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C77350; MGC103058; 1700047F16Rik; 6230415N01Rik; 2500002L14Rik	C77350; MGC103058; 1700047F16Rik; 6230415N01Rik; 2500002L14Rik
Mus musculus	RefSeq	ILMN_197627	ILMN_327715	LOC100047345	XM_001478444.1	XM_001478444.1		100047345	149251739	XM_001478444.1	LOC100047345	XP_001478494.1	ILMN_1228052	006900255	S	436	GATGATGCCAAAAGAGAACATGAAGCTGCCACAGCCACCGGAAGGACAGC					PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme E2 variant 1 (LOC100047345), mRNA.					
Mus musculus	MEEBO	ILMN_193844	ILMN_193844	4930503B20RIK	scl21408.3.1_5				21312893	NM_029144	4930503B20Rik		ILMN_1218111	002470253	S	1436	CGTATTAGGCCCTGCCTATTACCCAGTGAAGTAGTGACCACTCTGTCTCC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_190503	ILMN_229600	1700024P12RIK	XM_898137.2	XM_898137.2		69392	94401547	XM_898137.2	1700024P12Rik	XP_903230.2	ILMN_2470726	001580192	S	827	CAGCAGAGGGCGCCCTCGGCTCCCCTCACAGACGGCCCTGAGCTGTCTGC	17	+	3084750-3084799	17qA1	PREDICTED: Mus musculus RIKEN cDNA 1700024P12 gene (1700024P12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_236808	ILMN_236808	PNMA1	NM_027438.1	NM_027438.1		70481	58037210	NM_027438.1	Pnma1	NP_081714.1	ILMN_2848305	007200711	S	2121	CCGAGCTGCACAATCAGTTCCTCACGGTGGAAGACAGAAGTCCTAGGGGG	12	-	85036004-85036053	12qD1	Mus musculus paraneoplastic antigen MA1 (Pnma1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			5730402C15Rik; MGC144789; MGC144790	5730402C15Rik; MGC144789; MGC144790
Mus musculus	MEEBO	ILMN_223687	ILMN_223687	HSPA1A	scl50005.1_19				50080208	NM_010479	Hspa1a		ILMN_1225328	006270685	S	2849	ACACAGACACGGGTGTGGAGCACTCACAGGGACATTGCATTGTGATCTGC						That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_253175	ILMN_253175	GTF3C3	NM_001033194.2	NM_001033194.2		98488	141802741	NM_001033194.2	Gtf3c3	NP_001028366.1	ILMN_3160529	004290470	S	2809	CAACTGCTTTGAAGCAGGGGATGTAGCTCAGCTGTAGACTGCCTGCTTGC	1	-	54454571-54454620	1qC1.1	Mus musculus general transcription factor IIIC, polypeptide 3 (Gtf3c3), mRNA.				AL022818; TFIIIC102; TF3C-gamma	AL022818; TFIIIC102; TF3C-gamma
Mus musculus	RefSeq	ILMN_213561	ILMN_213561	SBNO2	NM_183426.1	NM_183426.1		216161	34556192	NM_183426.1	Sbno2	NP_906271.1	ILMN_1232770	003360086	S	2343	CTGGGCCGGGAGCTGCCAGTCAACACGTTGGACCAGCTCATCCACCAACT	10	-	79524931-79524980	10qC1	Mus musculus strawberry notch homolog 2 (Drosophila) (Sbno2), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response [goid 2281] [evidence IMP]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IMP]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]	Sno; F730040C21; BC019206; Stno	Sno; F730040C21; BC019206; Stno
Mus musculus	RefSeq	ILMN_213561	ILMN_213561	SBNO2	NM_183426.1	NM_183426.1		216161	34556192	NM_183426.1	Sbno2	NP_906271.1	ILMN_2638333	006220037	S	4473	TATGGGGGCTCCACGGGGCAGACCCCGTTAATATATGCAATCCCCTGCTC	10	-	79519876-79519925	10qC1	Mus musculus strawberry notch homolog 2 (Drosophila) (Sbno2), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response [goid 2281] [evidence IMP]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IMP]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]	Sno; F730040C21; BC019206; Stno	Sno; F730040C21; BC019206; Stno
Mus musculus	RefSeq	ILMN_220261	ILMN_220261	SOX21	NM_177753.2	NM_177753.2		223227	31343119	NM_177753.2	Sox21	NP_808421.1	ILMN_2721489	006420010	S	2036	TGCCCTAAATTTGAGTCGGTTTGAGACTCAATACATGTTGAGCAAATGTC	14	-	118633039-118633088	14qE4	Mus musculus SRY-box containing gene 21 (Sox21), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Sox25	Sox25
Mus musculus	RefSeq	ILMN_220261	ILMN_220261	SOX21	NM_177753.2	NM_177753.2		223227	31343119	NM_177753.2	Sox21	NP_808421.1	ILMN_1254295	000270736	S	2290	TTTTCAGAGCTCCCTTCCCATTTAGCTTATTTTCTAGACAGCCTGCAATT	14	-	118632785-118632834	14qE4	Mus musculus SRY-box containing gene 21 (Sox21), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Sox25	Sox25
Mus musculus	RefSeq	ILMN_214325	ILMN_214325	1110007A13RIK	NM_145955.3	NM_145955.3		210711	118130227	NM_145955.3	1110007A13Rik	NP_666067.1	ILMN_2646872	001400324	S	130	AGGGCGCGGACGAGGAGCGGCCGAGCCCCCGAGAAGCCGGGCTCCGAGCG	7	-	135883764-135883813	7qF3	Mus musculus RIKEN cDNA 1110007A13 gene (1110007A13Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU017382; MGC36596; BC025641	AU017382; MGC36596; BC025641
Mus musculus	RefSeq	ILMN_214325	ILMN_214325	1110007A13RIK	NM_145955.3	NM_145955.3		210711	118130227	NM_145955.3	1110007A13Rik	NP_666067.1	ILMN_1258421	007200491	S	2629	GGCAGAACTGGCCTTTCCCAGAACAGGTGGCGGTTCCTGGCTTTCAGATT	7	-	135841447-135841496	7qF3	Mus musculus RIKEN cDNA 1110007A13 gene (1110007A13Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU017382; MGC36596; BC025641	AU017382; MGC36596; BC025641
Mus musculus	RefSeq	ILMN_214325	ILMN_214325	1110007A13RIK	NM_145955.3	NM_145955.3		210711	118130227	NM_145955.3	1110007A13Rik	NP_666067.1	ILMN_2660082	002060520	S	3978	CTGGGTCTGGATCAGATTGTAACCCTGACCAGGCAGCTAGGTCTCTTTGG	7	-	135840098-135840147	7qF3	Mus musculus RIKEN cDNA 1110007A13 gene (1110007A13Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU017382; MGC36596; BC025641	AU017382; MGC36596; BC025641
Mus musculus	RefSeq	ILMN_211139	ILMN_211139	NLRP4C	NM_031389.1	NM_031389.1		83564	13878218	NM_031389.1	Nlrp4c	NP_113566.1	ILMN_2649947	007560164	S	1301	GACATCTACATACTCCAAGTGAAAAACACTAATCTCAATGAAACAGCCTC	7	+	6024227-6024276	7qA1	Mus musculus NLR family, pyrin domain containing 4C (Nlrp4c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nalp-alpha; Rnh2; Nalp4c	Nalp-alpha; Rnh2; Nalp4c
Mus musculus	RefSeq	ILMN_211139	ILMN_211139	NLRP4C	NM_031389.1	NM_031389.1		83564	13878218	NM_031389.1	Nlrp4c	NP_113566.1	ILMN_2935933	000290187	S	2717	GGTGGATTACTGGGCCTATAATGTCGGTCCAGGCAATGATGGTGCCCCAC	7	+	6056594-6056643	7qA1	Mus musculus NLR family, pyrin domain containing 4C (Nlrp4c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nalp-alpha; Rnh2; Nalp4c	Nalp-alpha; Rnh2; Nalp4c
Mus musculus	RefSeq	ILMN_211139	ILMN_211139	NLRP4C	NM_031389.1	NM_031389.1		83564	13878218	NM_031389.1	Nlrp4c	NP_113566.1	ILMN_1214165	001450274	S	1537	GAGCCAGGAAGAGTGCAACATAGAAAAGCTGATGGTAGCAGCCTGTAACC	7	+	6024854-6024878:6036146-6036170	7qA1	Mus musculus NLR family, pyrin domain containing 4C (Nlrp4c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nalp-alpha; Rnh2; Nalp4c	Nalp-alpha; Rnh2; Nalp4c
Mus musculus	RefSeq	ILMN_211139	ILMN_211139	NLRP4C	NM_031389.1	NM_031389.1		83564	13878218	NM_031389.1	Nlrp4c	NP_113566.1	ILMN_2612942	003290739	S	2635	ACTTGTATTCTAAGCATACAATAAAGTTACTTTTAAAGATAAAAGTATCT	7	+	6056512-6056561	7qA1	Mus musculus NLR family, pyrin domain containing 4C (Nlrp4c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nalp-alpha; Rnh2; Nalp4c	Nalp-alpha; Rnh2; Nalp4c
Mus musculus	RefSeq	ILMN_186158	ILMN_245670	WASL	NM_028459.1	NM_028459.1		73178	58037308	NM_028459.1	Wasl	NP_082735.1	ILMN_1231129	001010017	S	4034	CTCACGGATACATCCAGCTATGTGCTTGTCTGGTAGCCTTTGCGTTTAAC	6	-	24564035-24564084	6qA3.1	Mus musculus Wiskott-Aldrich syndrome-like (human) (Wasl), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament. Nucleation is slow relative to the subsequent addition of more monomers to extend the filament [goid 45010] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	3110031I02Rik; 2900021I12Rik; N-WASP	3110031I02Rik; 2900021I12Rik; N-WASP
Mus musculus	RefSeq	ILMN_199640	ILMN_199640	LOC382819	XM_356697.1	XM_356697.1			38075418	XM_356697.1	LOC382819		ILMN_2535955	005670161	S	109	TGGGGAGTACTAACCGACTGTGTGGGAATGAGAGATCCAAACACCAAGAG										
Mus musculus	Riken	ILMN_201706	ILMN_201706	1700030G05RIK	ri|1700030G05|ZX00038I11|AK006544|1601					AK006544	1700030G05Rik		ILMN_1246343	006650717	S	309	ACCCTTAAAAGTTCGGGAAACAAAGGCATCCTTACTTCGACCCCAATCCG										
Mus musculus	Riken	ILMN_206212	ILMN_206212	C130074O09RIK	ri|C130074O09|PX00171E02|AK081766|3029					AK081766	C130074O09Rik		ILMN_1233981	001980253	S	2800	GAGACTGTAGGGTGGAGGGGAAGGTGTTCTCTATCTCCCGAGGCAACCTC										
Mus musculus	Riken	ILMN_206660	ILMN_206660	A430019G17RIK	ri|A430019G17|PX00134H08|AK079704|2638					AK079704	A430019G17Rik		ILMN_1227621	003120021	S	2585	CCCAGAACCTACCAAAGGGTGACACTGCCCACAGTAGACCTTCCCTCATC										
Mus musculus	RefSeq	ILMN_216886	ILMN_216886	TBC1D10A	NM_134023.1	NM_134023.1		103724	19527239	NM_134023.1	Tbc1d10a	NP_598784.1	ILMN_2907473	005870255	S	1656	TGCTTGGCCCGTGGGCTGGGATAGGATCTGGCTGGTCCAGTACAGAGTCT	11	+	4115251-4115300	11qA1	Mus musculus TBC1 domain family, member 10a (Tbc1d10a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	FLJ00288; AI447804; Tbc1d10; mFLJ00288; RP23-453B22.5; EPI64	FLJ00288; AI447804; Tbc1d10; mFLJ00288; RP23-453B22.5; EPI64
Mus musculus	RefSeq	ILMN_216886	ILMN_216886	TBC1D10A	NM_134023.1	NM_134023.1		103724	19527239	NM_134023.1	Tbc1d10a	NP_598784.1	ILMN_1250076	002120521	S	1186	TGGTGAGCTGGAGTGCCGCTCTCTGCCCAGGATGCATGGTGCCAAAGCCA	11	+	4114781-4114830	11qA1	Mus musculus TBC1 domain family, member 10a (Tbc1d10a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	FLJ00288; AI447804; Tbc1d10; mFLJ00288; RP23-453B22.5; EPI64	FLJ00288; AI447804; Tbc1d10; mFLJ00288; RP23-453B22.5; EPI64
Mus musculus	RefSeq	ILMN_246403	ILMN_246403	HIST1H3A	NM_013550.3	NM_013550.3		360198	34328214	NM_013550.3	Hist1h3a	NP_038578.2	ILMN_2945694	001740487	S	300	CCGTCATGGCTTTGCAGGAGGCCTGTGAGGCCTACCTTGTGGGTCTGTTT	13	-	23769502-23769551	13qA3.1	Mus musculus histone cluster 1, H3a (Hist1h3a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_233571	ILMN_233571	GPX6	NM_145451.1	NM_145451.1		75512	21728387	NM_145451.1	Gpx6	NP_663426.1	ILMN_2792028	000460639	S	822	TCAAAGCACTGGCCGGTTAAAAGAAGTGGGGATGGGTGGCCAGATCCTCT	13	+	21326696-21326745	13qA3.1	Mus musculus glutathione peroxidase 6 (Gpx6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]	RP23-54E4.7; Ry2d1; 1700020G18Rik; MGC19204	RP23-54E4.7; Ry2d1; 1700020G18Rik; MGC19204
Mus musculus	RefSeq	ILMN_226450	ILMN_226450	GFI1B	NM_008114.2	NM_008114.2		14582	34328121	NM_008114.2	Gfi1b	NP_032140.1	ILMN_2895557	002750541	S	1466	GGGATTCTCTTTTTGGCTGCCACAGTCAGAGTTGTCCCCTGGCCTAGAGG	2	-	28465139-28465188	2qA3	Mus musculus growth factor independent 1B (Gfi1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Gfi-1B	Gfi-1B
Mus musculus	RefSeq	ILMN_214688	ILMN_214688	CAMSAP1	XM_129375.9	XM_129375.9		227634	149249144	XM_129375.9	Camsap1	XP_129375.7	ILMN_1251316	003310634	S	5320	AATTGTATAATATTTATTGACTGTGTCTACTGCCAACCTTTATATCCAGT				2qA3	PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1, transcript variant 1 (Camsap1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_214688	ILMN_214688	CAMSAP1	XM_129375.9	XM_129375.9		227634	149249144	XM_129375.9	Camsap1	XP_129375.7	ILMN_2660729	005310121	S	3098	GTGTTGGTGAGGTAGATGTGAACGAGTGTGACCTGTCCATTGAGAAGCTC				2qA3	PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1, transcript variant 1 (Camsap1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_214688	ILMN_214688	CAMSAP1	XM_129375.9	XM_129375.9		227634	149249144	XM_129375.9	Camsap1	XP_129375.7	ILMN_2650793	003140152	S	3981	GCTCAAGCGAGATGAAGCCCGGCGTAAGGCTGAAGAGGATCGACTACGGA				2qA3	PREDICTED: Mus musculus calmodulin regulated spectrin-associated protein 1, transcript variant 1 (Camsap1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_189323	ILMN_259799	ADAM10	NM_007399.3	NM_007399.3		11487	150378457	NM_007399.3	Adam10	NP_031425.2	ILMN_2460257	005050554	S	4133	CTGCTTTAAATCATTCAAATGCCTTTGTTTTTGGACTGTGCAAAGGTTGG				9qD	Mus musculus a disintegrin and metallopeptidase domain 10 (Adam10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence NAS]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [evidence NAS]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	kuzbanian; kuz; MADM; 1700031C13Rik	kuzbanian; kuz; MADM; 1700031C13Rik
Mus musculus	Riken	ILMN_202112	ILMN_202112	2810440J20RIK	ri|2810440J20|ZX00066H12|AK013276|1250					AK013276	2810440J20Rik		ILMN_1226648	003370553	S	942	GTGGACCTAGGATTCCAGATGTGCATCCCTGCACCTGTACACCACACATC										
Mus musculus	MEEBO	ILMN_188770	ILMN_188770	SCL000168.1_25	scl000168.1_25	AK030221.1			26081714	AK030221.1	scl000168.1_25		ILMN_2455560	004010131	S	20	ATTCCCATTCTACAAGAACAAGGAGCAGAGTGAGCAGGAAACCAGTGATC										
Mus musculus	RefSeq	ILMN_236111	ILMN_236111	KRT78	NM_212487.3	NM_212487.3		332131	125490387	NM_212487.3	Krt78	NP_997652.3	ILMN_2941239	006770025	S	2069	GAGGAGAATGTGGGGGTCAAGTGACCATGCCTGGAAGAGAATATGGAGGC	15	-	101777057-101777106	15qF3	Mus musculus keratin 78 (Krt78), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			2310030B04Rik; Kb40	2310030B04Rik; Kb40
Mus musculus	MEEBO	ILMN_209255	ILMN_209255	DSCAM	scl0013508.1_59	NM_031174.2			34328335	NM_031174.2	Dscam		ILMN_2662709	003870255	S	5192	GTCAGTTGTCCAAAGCGAAGAAGGGCTGACAACCAACGAAGGGCTCAAGA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized in a camera-type eye during the post-embryonic life stage . Morphogenesis pertains to the creation of form [goid 60060] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_191861	ILMN_240802	LOC677317	XM_001004685.1	XM_001004685.1		677317	94385842	XM_001004685.1	LOC677317	XP_001004685.1	ILMN_2774690	005690743	S	3145	GTGCAGAAGCTTTCAGGTGTGAGCTAAAAGGGTACAGACTTCCTAATGAC					PREDICTED: Mus musculus similar to Mod1 protein, transcript variant 4 (LOC677317), mRNA.					
Mus musculus	RefSeq	ILMN_244828	ILMN_314298	4930428E23RIK	XR_035327.1	XR_035327.1		434800	149271945	XR_035327.1	4930428E23Rik		ILMN_3161560	000510577	S	278	CTGACATCAACAGACAAGTCTCAGGACTCCAGAGGCCATGGATGACCAAG				XqA7.3	PREDICTED: Mus musculus RIKEN cDNA 4930428E23 gene (4930428E23Rik), misc RNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222251	ILMN_222251	GPR120	NM_181748.2	NM_181748.2		107221	118130700	NM_181748.2	Gpr120	NP_861413.1	ILMN_2746895	004060639	S	1209	CCTGCTTTAAAAATACCCGACTTCCAACAGCAGGCATCTACGGAGCCAGC	19	+	38188569-38188618	19qC2-qC3	Mus musculus G protein-coupled receptor 120 (Gpr120), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The regulated release of hormones, substances with a specific regulatory effect on a particular organ or group of cells [goid 46879] [evidence IDA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IDA]; Interacting selectively with fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 5504] [evidence IDA]	GT01; KPG_013; AI552415	GT01; KPG_013; AI552415
Mus musculus	Riken	ILMN_206909	ILMN_206909	9430090C23RIK	ri|9430090C23|PX00110H12|AK079153|2966					AK079153	9430090C23Rik		ILMN_2583611	003290273	S	2916	CAGATGGAGTACCAGACAGCCAAGGCTGTCTCAAAAAACCAAAACAAACC										
Mus musculus	RefSeq	ILMN_215959	ILMN_314246	LOC100044221	XM_001471842.1	XM_001471842.1		100044221	149252896	XM_001471842.1	LOC100044221	XP_001471892.1	ILMN_1255254	001240504	S	1006	TGGGATGCCCCGAGCATTGTGGGCCTCGTCATCTTCATCCTGTGCACCTT					PREDICTED: Mus musculus hypothetical protein LOC100044221 (LOC100044221), mRNA.					
Mus musculus	MEEBO	ILMN_188298	ILMN_188298	BC038881	scl31898.18.1_35				51762678	XM_355977	BC038881		ILMN_2540866	000940195	S	2264	GCATGCCGGTGTCTGCAGGGATCGCAGAACTTCCTTGGCTCTCAGCAACT										
Mus musculus	MEEBO	ILMN_188298	ILMN_188298	BC038881	scl31898.18.1_35				51762678	XM_355977	BC038881		ILMN_1253579	002100021	S	20	CACACGCAGCCGCAAAGGTGCCCGCGCACAGCGATCCTGAAGACCTAGCT										
Mus musculus	MEEBO	ILMN_214763	ILMN_214763	SLC43A3	scl20687.14.1_105	NM_021398.1			10946743	NM_021398.1	Slc43a3		ILMN_2687437	003930521	S	68	GCAAAGCTCGACAGGGAGGCTCTGGGCGGAGGGTAGTGGAAGGCGGTAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_189674	ILMN_189674	TRAP1A	NM_011635.1	NM_011635.1		22037	6755870	NM_011635.1	Trap1a	NP_035765.1	ILMN_2463395	000270377	S	1033	TAGTAATCCAGAAAATTTGATTTTGTTCTAAAGTTCATTATGCAAAGATG	X	+	135872563-135872612	XqF1	Mus musculus tumor rejection antigen P1A (Trap1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Tra-P1A	Tra-P1A
Mus musculus	RefSeq	ILMN_211228	ILMN_238142	1700034O15RIK	NM_029671.2	NM_029671.2		76606	118130645	NM_029671.2	1700034O15Rik	NP_083947.1	ILMN_2613803	005390450	S	588	CTCTCATATCCACCACCTAATTGCCACCCCAACCCAGAATTTCATGTCCC	6	+	41630569-41630618	6qB2.1	Mus musculus RIKEN cDNA 1700034O15 gene (1700034O15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211138	ILMN_244082	CSMD3	NM_001081391.1	NM_001081391.1		239420	124487116	NM_001081391.1	Csmd3	NP_001074860.1	ILMN_2653633	007050646	S	3403	CCTGGGATTCCTCAATATGGTAGCCGAGTTGGATTCAGCTTTGGAGTCGG	15	-	47779637-47779686	15qB3.3	Mus musculus CUB and Sushi multiple domains 3 (Csmd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]			mKIAA1894; 4930500N14Rik	mKIAA1894; 4930500N14Rik
Mus musculus	RefSeq	ILMN_199798	ILMN_244082	CSMD3	NM_001081391.1	NM_001081391.1		239420	124487116	NM_001081391.1	Csmd3	NP_001074860.1	ILMN_1250241	007560403	S	1837	AGCTGTGGCGATCCTGGCACACCGTTATATGGAATTAGAGAAGGCGATGG	15	-	47842708-47842757	15qB3.3	Mus musculus CUB and Sushi multiple domains 3 (Csmd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]			mKIAA1894; 4930500N14Rik	mKIAA1894; 4930500N14Rik
Mus musculus	RefSeq	ILMN_199799	ILMN_244082	CSMD3	NM_001081391.1	NM_001081391.1		239420	124487116	NM_001081391.1	Csmd3	NP_001074860.1	ILMN_1215832	006860152	S	1060	TCAGGTCTGGATCCCAACACACCCGAGGACCAGCTTTCTCCTCATCAAGC	15	-	48145427-48145476	15qB3.3	Mus musculus CUB and Sushi multiple domains 3 (Csmd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]			mKIAA1894; 4930500N14Rik	mKIAA1894; 4930500N14Rik
Mus musculus	RefSeq	ILMN_211138	ILMN_244082	CSMD3	NM_001081391.1	NM_001081391.1		239420	124487116	NM_001081391.1	Csmd3	NP_001074860.1	ILMN_1234234	000830139	S	11422	GTCTGGAGTTCACACCACAAATCTGCAGTTCATTCTGTTTATCCCAGGCA	15	-	47413499-47413548	15qB3.3	Mus musculus CUB and Sushi multiple domains 3 (Csmd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]			mKIAA1894; 4930500N14Rik	mKIAA1894; 4930500N14Rik
Mus musculus	RefSeq	ILMN_188748	ILMN_188748	V1RA1	NM_011683.2	NM_011683.2		22296	121949776	NM_011683.2	V1ra1	NP_035813.2	ILMN_2931315	007320477	S	1884	CCTTAGGAAGAGCTAATGGGCTGGCATCAGAACTATCAGTCATGGCATGC	6	+	90079347-90079396	6qD1	Mus musculus vomeronasal 1 receptor, A1 (V1ra1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]	V1r1; VN12; V1R; mV1R1	V1r1; VN12; V1R; mV1R1
Mus musculus	RefSeq	ILMN_223794	ILMN_228975	EWSR1	NM_007968.2	NM_007968.2		14030	88853580	NM_007968.2	Ewsr1	NP_031994.2	ILMN_1219609	004850609	S	2066	ACCAGAAAATGTTTTAAATTTATAATTCCATATTTATAATGTTGGCGACA	11	-	4977121-4977170	11qA1	Mus musculus Ewing sarcoma breakpoint region 1 (Ewsr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Ewsh; Ews; AU018891	Ewsh; Ews; AU018891
Mus musculus	RefSeq	ILMN_200111	ILMN_200111	LOC384211	XM_357492.1	XM_357492.1			38080429	XM_357492.1	LOC384211		ILMN_1238815	002690592	S	88	AAGGGGCAAAACCAGAGGCCACAGTGGATGAGCCTGGAGACAAGCCCTTG										
Mus musculus	RefSeq	ILMN_192565	ILMN_236828	ASB15	NM_080847.2	NM_080847.2		78910	142379715	NM_080847.2	Asb15	NP_543123.1	ILMN_2686400	005090253	S	1823	CCCGGCGGCGATGCGAAGATACTTATTATTTAAAGAGTTTGACCTCTACG	6	+	24520719-24520768	6qA3.1	Mus musculus ankyrin repeat and SOCS box-containing 15 (Asb15), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		4930400E23Rik; Asb-15	4930400E23Rik; Asb-15
Mus musculus	RefSeq	ILMN_185164	ILMN_318458	KALRN	XM_001481028.1	XM_001481028.1		545156	149267521	XM_001481028.1	Kalrn	XP_001481078.1	ILMN_2424713	004290575	S	10197	GCAATACCTATCACCACACAGCCACCAACGGCTCTGGACAGAAAGGACCA	16	-	33974372-33974421	16qB3	PREDICTED: Mus musculus kalirin, RhoGEF kinase (Kalrn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197942	ILMN_318458	KALRN	XM_001481028.1	XM_001481028.1		545156	149267521	XM_001481028.1	Kalrn	XP_001481078.1	ILMN_1224913	000240670	S	3385	TCCTGCACTTCTGGACCTTGAAGAAGCGGCGGTTAGACCAGTGTCAGCAA	16	-	34212906-34212955	16qB3	PREDICTED: Mus musculus kalirin, RhoGEF kinase (Kalrn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220860	ILMN_318458	KALRN	XM_001481028.1	XM_001481028.1		545156	149267521	XM_001481028.1	Kalrn	XP_001481078.1	ILMN_2727847	001240014	S	9101	GTTCTCTGGACTGACAGGTGATCCTCTTAAACCTTGTCTGTGGTTACCCG	16	-	33975468-33975517	16qB3	PREDICTED: Mus musculus kalirin, RhoGEF kinase (Kalrn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200136	ILMN_318458	KALRN	XM_001481028.1	XM_001481028.1		545156	149267521	XM_001481028.1	Kalrn	XP_001481078.1	ILMN_1223181	001850079	S	7993	TTCCCAGTGAGCCCTCGGAGTTTGTGCGCCTTCCAGAGTACGATGCAGCC	16	-	33985331-33985339:33987172-33987212	16qB3	PREDICTED: Mus musculus kalirin, RhoGEF kinase (Kalrn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190358	ILMN_190358	1700041G16RIK	scl33992.2_416				31340831	NM_175196	1700041G16Rik		ILMN_1244939	002570164	S	280	GGGTAGCGAGTGTGAGCGCTGGCGTGTGTATTTGCATTTCAGGAAGTGGT										
Mus musculus	MEEBO	ILMN_190358	ILMN_190358	1700041G16RIK	scl33992.2_416				31340831	NM_175196	1700041G16Rik		ILMN_2469459	003780600	S	4	CCGAGTTCCAACCCCCCTTCAAAAACACACGCTCAATTGGCTTGATTCCT										
Mus musculus	RefSeq	ILMN_221541	ILMN_221541	SCPEP1	NM_029023.2	NM_029023.2		74617	31982616	NM_029023.2	Scpep1	NP_083299.2	ILMN_2736968	001030102	S	1598	CCCAAAGAGTATTTAAAACCAGACTCATTTAATCAAAGTGAAGGGTTGCA	11	-	88785750-88785799	11qC	Mus musculus serine carboxypeptidase 1 (Scpep1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [evidence IEA]	Risc; 4833411K15Rik; 2410018F01Rik; AI957256	Risc; 4833411K15Rik; 2410018F01Rik; AI957256
Mus musculus	RefSeq	ILMN_211258	ILMN_312771	LOC100047958	XM_001479234.1	XM_001479234.1		100047958	149251862	XM_001479234.1	LOC100047958	XP_001479284.1	ILMN_2614067	002810180	S	1962	GGCCGAGCTGAAGTTGGAATACGAGAGCTATCTGGATCTTGAGAAGTCTG					PREDICTED: Mus musculus similar to WD repeat domain 63 (LOC100047958), mRNA.					
Mus musculus	RefSeq	ILMN_198202	ILMN_198202	LOC272701	XM_197623.3	XM_197623.3			38082775	XM_197623.3	LOC272701		ILMN_1227613	002850332	S	692	TGACAGCAGTGGGAGCCACCAATGCACCCAAGGACTTCAACTTGAGGCTG										
Mus musculus	RefSeq	ILMN_258699	ILMN_258699	EG665186	NM_001080712.1	NM_001080712.1		665186	123959719	NM_001080712.1	EG665186	NP_001074181.1	ILMN_2981710	000830132	S	335	GCACACACCACAGCACAATCACACAGACACCTTCCCAGCCACAGACGGAC	4	-	133758535-133758584	4qD3	Mus musculus predicted gene, EG665186 (EG665186), mRNA.					
Mus musculus	RefSeq	ILMN_215246	ILMN_215246	OLFR850	NM_146523.1	NM_146523.1		258516	33239273	NM_146523.1	Olfr850	NP_666734.1	ILMN_2657185	003440133	S	622	ATATTTACTGGTATTCCTATCTCTGGAATAGTTTTTTCTTATGTTCACAT	9	-	19282021-19282070	9qA2	Mus musculus olfactory receptor 850 (Olfr850), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR147-2	MOR147-2
Mus musculus	MEEBO	ILMN_190151	ILMN_190151	9530002O20RIK	scl515.1.1_48						9530002O20Rik		ILMN_1238383	005550154	S	1	GCAGGGGGTGACAGAGTTGCAGTGGATCGGGAATGTTAAGAGTACCAGTC										
Mus musculus	RefSeq	ILMN_216916	ILMN_260148	NEBL	NM_028757.2	NM_028757.2		74103	142365246	NM_028757.2	Nebl	NP_083033.1	ILMN_1218944	003170064	S	2909	CTGCTTTCATGTCTTGAACACACACCTACAAAGATAAACTGCACTTGCAA	2	-	17268382-17268431	2qA3	Mus musculus nebulette (Nebl), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC118387; A630080F05Rik; 1200007O21Rik; Lnebl; BB140644; D830029A09Rik	MGC118387; A630080F05Rik; 1200007O21Rik; Lnebl; BB140644; D830029A09Rik
Mus musculus	RefSeq	ILMN_210868	ILMN_210868	SLC47A1	NM_026183.4	NM_026183.4		67473	146134971	NM_026183.4	Slc47a1	NP_080459.1	ILMN_2694463	000830152	S	700	CTGAGGCTGACGGAAGGACCTATATTTAGAGCATTGTAGCTGGGAGGAGC				11qB2	Mus musculus solute carrier family 47, member 1 (Slc47a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of drugs into, out of, within or between cells [goid 6855] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Enables the directed movement of a drug into, out of, within or between cells. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 15238] [evidence IEA]	1300013J15Rik; RP23-451A6.3; AI036982	1300013J15Rik; RP23-451A6.3; AI036982
Mus musculus	RefSeq	ILMN_210868	ILMN_210868	SLC47A1	NM_026183.4	NM_026183.4		67473	146134971	NM_026183.4	Slc47a1	NP_080459.1	ILMN_2749840	001260129	S	1731	ACCACGTGCTTCCTGGCTTTTATTGCTCGGCTCAATTGGAAACGCGCCTG				11qB2	Mus musculus solute carrier family 47, member 1 (Slc47a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of drugs into, out of, within or between cells [goid 6855] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Enables the directed movement of a drug into, out of, within or between cells. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 15238] [evidence IEA]	1300013J15Rik; RP23-451A6.3; AI036982	1300013J15Rik; RP23-451A6.3; AI036982
Mus musculus	RefSeq	ILMN_258269	ILMN_258269	OLFR618	NM_147047.1	NM_147047.1		259049	22128856	NM_147047.1	Olfr618	NP_667258.1	ILMN_2861686	001110661	S	782	CCTTTTTTGCTCACCGTTTTGGGGGCCACACCATACCACGTCACATGCAC	7	+	110746613-110746662	7qE3	Mus musculus olfactory receptor 618 (Olfr618), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR31-9	MOR31-9
Mus musculus	RefSeq	ILMN_184752	ILMN_184752	ZFP317	NM_172918.3	NM_172918.3		244713	40254382	NM_172918.3	Zfp317	NP_766506.3	ILMN_2481799	000050278	S	2479	CATGCTCCCAAACACACAAGAACTGAGGCAGAGAGTCTTCACCCTGAGCA	9	+	19452666-19452715	9qA2-qA3	Mus musculus zinc finger protein 317 (Zfp317), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Zfp67; KRAB9; D230022C05Rik; mszf40; 4932416G03	Zfp67; KRAB9; D230022C05Rik; mszf40; 4932416G03
Mus musculus	RefSeq	ILMN_184752	ILMN_184752	ZFP317	NM_172918.3	NM_172918.3		244713	40254382	NM_172918.3	Zfp317	NP_766506.3	ILMN_2421275	002690519	S	3726	GCCATGACTCTGGCCGTTGACTCATAAATAGAGATAAGTGTGTGGCATTC	9	+	19453913-19453962	9qA2-qA3	Mus musculus zinc finger protein 317 (Zfp317), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Zfp67; KRAB9; D230022C05Rik; mszf40; 4932416G03	Zfp67; KRAB9; D230022C05Rik; mszf40; 4932416G03
Mus musculus	RefSeq	ILMN_184752	ILMN_184752	ZFP317	NM_172918.3	NM_172918.3		244713	40254382	NM_172918.3	Zfp317	NP_766506.3	ILMN_1252587	005080687	S	2498	GAACTGAGGCAGAGAGTCTTCACCCTGAGCATTAGTGCTAAAGTCAGCAC	9	+	19452685-19452734	9qA2-qA3	Mus musculus zinc finger protein 317 (Zfp317), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Zfp67; KRAB9; D230022C05Rik; mszf40; 4932416G03	Zfp67; KRAB9; D230022C05Rik; mszf40; 4932416G03
Mus musculus	RefSeq	ILMN_222965	ILMN_222965	GAMT	NM_010255.1	NM_010255.1		14431	6753943	NM_010255.1	Gamt	NP_034385.1	ILMN_2815506	000290044	S	840	CAAGGAGCCTGTGTCCTCCTCAGTACCTTTGTGGCTGGATTGTGGGCTCC	10	-	79720994-79721043	10qC1	Mus musculus guanidinoacetate methyltransferase (Gamt), mRNA.		Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The chemical reactions and pathways resulting in the formation of creatine (N-(aminoiminomethyl)-N-methylglycine), a compound synthesized from the amino acids arginine, glycine, and methionine that occurs in muscle [goid 6601] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + guanidinoacetate = S-adenosyl-L-homocysteine + creatine [goid 30731] [evidence IEA]	AA571402; Spintz1	AA571402; Spintz1
Mus musculus	RefSeq	ILMN_223418	ILMN_223418	9930032O22RIK	NM_177162.3	NM_177162.3		320454	141803131	NM_177162.3	9930032O22Rik	NP_796136.1	ILMN_1259406	000730020	S	2711	GTATCAAACCAAACTCAGACTTACTCTGTACATCCTAATCTTTGTCCTCC	5	-	86915013-86915062	5qE1	Mus musculus RIKEN cDNA 9930032O22 gene (9930032O22Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Desc4	Desc4
Mus musculus	RefSeq	ILMN_212968	ILMN_212968	TBC1D15	NM_025706.2	NM_025706.2		66687	31981206	NM_025706.2	Tbc1d15	NP_079982.2	ILMN_2820814	000240343	S	2014	GCCAAAGATGACAGTCCAACACAGACATTAGCATCCCCGAATGCCTGCAG	10	-	114636614-114636663	10qD2	Mus musculus TBC1 domain family, member 15 (Tbc1d15), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	4432405K22Rik; AU023730; AU022358; AW557774	4432405K22Rik; AU023730; AU022358; AW557774
Mus musculus	MEEBO	ILMN_190253	ILMN_190253	C230002E15RIK	scl0319708.2_2						C230002E15Rik		ILMN_1228683	006280292	S	16	ATACTTTCTTCCATTATATAACAACAGCATGTGCTCAGAAATTTTTGGAA										
Mus musculus	RefSeq	ILMN_209889	ILMN_209889	PPBP	NM_023785.1	NM_023785.1		57349	12963822	NM_023785.1	Ppbp	NP_076274.1	ILMN_2908435	006580324	S	616	ACGGGCAAGCCAAGTTGCAACCTGCAATTTATGGTCTATTTCTGCAGTTC	5	+	91844796-91844845	5qE1	Mus musculus pro-platelet basic protein (Ppbp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AI854500; Cxcl7; b-TG1; TGB; LA-PF4; NAP-2-L1; LDGF; THBGB1; 2400003M24Rik; Scyb7; beta-TG; TGB1; NAP-2; CTAP3; MDGF; CTAPIII	AI854500; Cxcl7; b-TG1; TGB; LA-PF4; NAP-2-L1; LDGF; THBGB1; 2400003M24Rik; Scyb7; beta-TG; TGB1; NAP-2; CTAP3; MDGF; CTAPIII
Mus musculus	Riken	ILMN_202966	ILMN_202966	A230013J07RIK	ri|A230013J07|PX00126K02|AK038453|824					AK038453	A230013J07Rik		ILMN_2553688	004570288	S	30	GGGTGGTGATCTCCAGCTCTGATTCAGTCACCCCAGGGATGTGGGATTAC										
Mus musculus	RefSeq	ILMN_218049	ILMN_218049	UGT2B1	NM_152811.1	NM_152811.1		71773	22779900	NM_152811.1	Ugt2b1	NP_690024.1	ILMN_1228666	006480176	S	2302	CCTGAACACTGTCATTCTCATTCTGCCTTTTGAAGTAGATTTAAGCTGCC	5	-	87345857-87345906	5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide B1 (Ugt2b1), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	1300012D20Rik	1300012D20Rik
Mus musculus	RefSeq	ILMN_197161	ILMN_318537	GM24	XR_035300.1	XR_035300.1		195236	149263935	XR_035300.1	Gm24		ILMN_1257254	004860767	S	2687	CAAGACAGAGTATGACCCCAAGCACCCTAGCTCCCTTTGTGCAATGCTGG	13	+	22076002-22076051	13qA3.1	PREDICTED: Mus musculus gene model 24, (NCBI) (Gm24), misc RNA.					
Mus musculus	RefSeq	ILMN_216447	ILMN_216447	WFDC2	NM_026323.2	NM_026323.2		67701	141802067	NM_026323.2	Wfdc2	NP_080599.1	ILMN_1236758	000070601	S	615	CCTTTCTCTCTGGTCTTTGCATTTCTTCCTGGTCCGATGAAAGCATCTCC	2	+	164393913-164393962	2qH3	Mus musculus WAP four-disulfide core domain 2 (Wfdc2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	1600023A02Rik; WAP5; HE4	1600023A02Rik; WAP5; HE4
Mus musculus	RefSeq	ILMN_218828	ILMN_230978	OLFR58	NM_011001.2	NM_011001.2		18358	114520615	NM_011001.2	Olfr58	NP_035131.1	ILMN_2700736	003130180	S	842	ACATAGCCATGTTTCTTTCAAGCATCATTGTTGGATTCCTCCCTGCCTCA	9	+	19588165-19588214	9qA3	Mus musculus olfactory receptor 58 (Olfr58), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	IG6; MOR146-7P; MOR146-3	IG6; MOR146-7P; MOR146-3
Mus musculus	RefSeq	ILMN_223497	ILMN_223497	HIVEP2	NM_010437.2	NM_010437.2		15273	85861240	NM_010437.2	Hivep2	NP_034567.2	ILMN_1246789	005130072	S	8476	CCTCTTTTGGACACTTGGATCTAAACGATGTAAAGCAAAGCAGCATCTAT	10	+	13869892-13869941	10qA2	Mus musculus human immunodeficiency virus type I enhancer binding protein 2 (Hivep2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence TAS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Schnurri-2; MIBP1; Shn-2	Schnurri-2; MIBP1; Shn-2
Mus musculus	Riken	ILMN_202727	ILMN_202727	TRFP	ri|2410115I17|ZX00080J06|AK019130|601					AK019130	Trfp		ILMN_1244097	005570064	S	458	TGGAGAGACTGTGCTTGCCATCGCCTGTCAAGAATGATTAGCCACCCCCT										
Mus musculus	RefSeq	ILMN_208629	ILMN_208629	ATG4C	NM_175029.2	NM_175029.2		242557	40254278	NM_175029.2	Atg4c	NP_778194.2	ILMN_2671298	003440402	S	3089	GACAAACTTGTGATATAAGAGTGTAAGAGCTATTACCAAGCCAGGATTAT	4	+	98926389-98926438	4qC6	Mus musculus autophagy-related 4C (yeast) (Atg4c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; Any multimeric complex connected to a microtubule [goid 5875] [evidence ISS]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISS]; The process of directing proteins towards the vacuole using signals contained within the protein [goid 6623] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence ISS]	Apg4c; Apg4-C; Atg4cl; Autl1	Apg4c; Apg4-C; Atg4cl; Autl1
Mus musculus	RefSeq	ILMN_208629	ILMN_208629	ATG4C	NM_175029.2	NM_175029.2		242557	40254278	NM_175029.2	Atg4c	NP_778194.2	ILMN_2914796	006040050	S	2723	CTGTCAGGACTGGGTCTGGGGGTTGAACCCAGGGCCTTGTATATGATAGG	4	+	98926023-98926072	4qC6	Mus musculus autophagy-related 4C (yeast) (Atg4c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; Any multimeric complex connected to a microtubule [goid 5875] [evidence ISS]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISS]; The process of directing proteins towards the vacuole using signals contained within the protein [goid 6623] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence ISS]	Apg4c; Apg4-C; Atg4cl; Autl1	Apg4c; Apg4-C; Atg4cl; Autl1
Mus musculus	RefSeq	ILMN_211099	ILMN_211099	SF3B4	NM_153053.3	NM_153053.3		107701	31982251	NM_153053.3	Sf3b4	NP_694693.1	ILMN_3127739	004040377	A	121	TTTCTCCAGGCAGGGCCAGTGGTCAACACCCACATGCCCAAGGACAGAGT	3	+	95976956-95977005	3qF2.1	Mus musculus splicing factor 3b, subunit 4 (Sf3b4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC36564; Sap49; SF3b50; SF3b49; MGC36369; 49kDa	MGC36564; Sap49; SF3b50; SF3b49; MGC36369; 49kDa
Mus musculus	RefSeq	ILMN_211099	ILMN_211099	SF3B4	NM_153053.3	NM_153053.3		107701	31982251	NM_153053.3	Sf3b4	NP_694693.1	ILMN_3051392	001450358	I	1545	TAGGAGGAGTCTGGGTTTGTGGGAGGAACAGTATGAAAAAGGGAAGGTGT	3	+	95981335-95981384	3qF2.1	Mus musculus splicing factor 3b, subunit 4 (Sf3b4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC36564; Sap49; SF3b50; SF3b49; MGC36369; 49kDa	MGC36564; Sap49; SF3b50; SF3b49; MGC36369; 49kDa
Mus musculus	RefSeq	ILMN_211099	ILMN_211099	SF3B4	NM_153053.3	NM_153053.3		107701	31982251	NM_153053.3	Sf3b4	NP_694693.1	ILMN_2612502	007000750	S	1262	CACCTCGTGGTCCTCTTCGGGGCCCACTTCCTCAGTAAATTGCCATCCTT	3	+	95981052-95981089:95981090-95981101	3qF2.1	Mus musculus splicing factor 3b, subunit 4 (Sf3b4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC36564; Sap49; SF3b50; SF3b49; MGC36369; 49kDa	MGC36564; Sap49; SF3b50; SF3b49; MGC36369; 49kDa
Mus musculus	MEEBO	ILMN_195953	ILMN_195953	HSPG2	scl24799.82_95						Hspg2		ILMN_2520249	006420725	S	19	ACCTCAGCTTGGGAAGGGAACGAGGGATGATGATAACCCTGCCCATCTGG						A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211805	ILMN_261180	5033428B15RIK	XM_908537.2	XM_908537.2		76002	94406067	XM_908537.2	5033428B15Rik	XP_913630.1	ILMN_1220925	007040102	S	1052	CCCAGTTCAGACCACCCTCCCCAGTAATGTTCCCCTTGAACAAGTATACC				19qA	PREDICTED: Mus musculus RIKEN cDNA 5033428B15 gene (5033428B15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_185539	ILMN_233227	CAPNS2	XM_894405.2	XM_894405.2		69543	94383721	XM_894405.2	Capns2	XP_899498.1	ILMN_2427874	004890440	S	712	TGCCTGGTTCGCCTGGATGCTATGTTTCGAGCTTTCAAGGCTCTGGACCG	8	+	95426014-95426063	8qC5	PREDICTED: Mus musculus calpain, small subunit 2 (Capns2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220288	ILMN_252545	PDE11A	NM_001081033.1	NM_001081033.1		241489	124486645	NM_001081033.1	Pde11a	NP_001074502.1	ILMN_2720173	004760609	S	2335	CCTCATGCAGCTCCTGAAGCAGTCAATATTAGCCACAGACCTCACGCTCT	2	-	75884842-75884891	2qC3	Mus musculus phosphodiesterase 11A (Pde11a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]	6330414F14Rik; A630086N24Rik; PDE11A1	6330414F14Rik; A630086N24Rik; PDE11A1
Mus musculus	RefSeq	ILMN_190637	ILMN_221469	CGNL1	NM_026599.4	NM_026599.4		68178	56550078	NM_026599.4	Cgnl1	NP_080875.3	ILMN_1235904	000070148	S	1797	GCACAGACAATGAGGATGCCACCAAAAGGAAAGTGAACCTGGTCTTTGAG	9	-	71569456-71569505	9qD	Mus musculus cingulin-like 1 (Cgnl1), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9930020M10Rik; AI503810; Jacop; 4933421H10Rik	9930020M10Rik; AI503810; Jacop; 4933421H10Rik
Mus musculus	RefSeq	ILMN_221469	ILMN_221469	CGNL1	NM_026599.4	NM_026599.4		68178	56550078	NM_026599.4	Cgnl1	NP_080875.3	ILMN_3003864	005570736	S	4326	GAACCAGACCTTCTCAAGGACCGCTGTTCTCCTTAAGGATGCTCCAGAGC	9	-	71476694-71476743	9qD	Mus musculus cingulin-like 1 (Cgnl1), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9930020M10Rik; AI503810; Jacop; 4933421H10Rik	9930020M10Rik; AI503810; Jacop; 4933421H10Rik
Mus musculus	Riken	ILMN_206333	ILMN_206333	D330035K16RIK	ri|D330035K16|PX00192E02|AK084720|1243					AK084720	D330035K16Rik		ILMN_1220631	003310100	S	1027	GACTACTCCACAGCCTGGATTTTCCCCAAATTTTCCTTGTGCCTTGGCTG										
Mus musculus	RefSeq	ILMN_220613	ILMN_220613	0610009O20RIK	NM_024179.4	NM_024179.4		66839	142383028	NM_024179.4	0610009O20Rik	NP_077141.2	ILMN_1213681	002900228	S	1911	CTCCTTGCTTAGGTTCCTGAAGACAGACTGGTGCCCACAGTTCCATGGCC	18	+	38421800-38421849	18qB3	Mus musculus RIKEN cDNA 0610009O20 gene (0610009O20Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2700004E22Rik	2700004E22Rik
Mus musculus	RefSeq	ILMN_203542	ILMN_319510	LOC100041567	XM_001476645.1	XM_001476645.1		100041567	149258395	XM_001476645.1	LOC100041567	XP_001476695.1	ILMN_1252479	005910593	S	4228	GTTCCATCTGTCTAGGGTGGTAGGCTCATGCTTAGTAAGTACTAGGAGGC	8	+	19788000-19788049	8qA1.3	PREDICTED: Mus musculus similar to p47 protein (LOC100041567), mRNA.					
Mus musculus	RefSeq	ILMN_201011	ILMN_201011	LOC385543	XM_358276.1	XM_358276.1			38087922	XM_358276.1	LOC385543		ILMN_2540789	004280176	S	165	GGTGAAGTATGATGGAATTGACAGCATCTATGGACAGGAGCTCTACAGTG										
Mus musculus	RefSeq	ILMN_210163	ILMN_210163	PLP2	NM_019755.2	NM_019755.2		18824	31980963	NM_019755.2	Plp2	NP_062729.1	ILMN_3001616	006980021	S	517	ATACAGCAGCTCCCACTGACCCCACTGATGGCCCGTGATCGTCTTTCAGC	X	-	6825432-6825445:6825446-6825465:6825886-6825901	XqA1.1	Mus musculus proteolipid protein 2 (Plp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC103126; MGC102445; mIMA4	MGC103126; MGC102445; mIMA4
Mus musculus	RefSeq	ILMN_199558	ILMN_199558	LOC383635	XM_357167.1	XM_357167.1			38074305	XM_357167.1	LOC383635		ILMN_2535654	000830202	S	548	CCTATGGACAACCTGACTTCAGTTCCTATGATGGCCTTACCACATCTGCC										
Mus musculus	RefSeq	ILMN_221054	ILMN_221054	JARID1D	NM_011419.3	NM_011419.3		20592	100816530	NM_011419.3	Jarid1d	NP_035549.1	ILMN_1224210	005390398	S	5101	CCTGTATGCGTTTCCCAAAATTTTACCATCAATATTCCTGGGACTAGCAT	Y	+	279884-279933	YqA1	Mus musculus jumonji, AT rich interactive domain 1D (Rbp2 like) (Jarid1d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Smcy	Smcy
Mus musculus	Riken	ILMN_205060	ILMN_205060	D130078K04RIK	ri|D130078K04|PX00186I14|AK051779|3130					AK051779	D130078K04Rik		ILMN_2569683	001850408	S	3075	ACAAGGCCAACAGGCTCATTCAAACCCTAAGACTTCCATGTACTGCCTGC										
Mus musculus	RefSeq	ILMN_212903	ILMN_212903	TMEM38A	NM_144534.1	NM_144534.1		74166	21362330	NM_144534.1	Tmem38a	NP_653117.1	ILMN_1245673	003290471	S	1820	TAGGAGCGAGCCTTATACAGGGGAAGGGCCATGGTCGCCAAAGTCTCCAG	8	+	75110907-75110956	8qB3.3	Mus musculus transmembrane protein 38A (Tmem38a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IEA]	mg33a; TRIC-A; 1110001E17Rik; AI413399	mg33a; TRIC-A; 1110001E17Rik; AI413399
Mus musculus	RefSeq	ILMN_214929	ILMN_214929	RHOJ	NM_023275.2	NM_023275.2		80837	70980541	NM_023275.2	Rhoj	NP_075764.1	ILMN_2653567	006380156	S	2272	AGTCCTTCATGACACCCCTTCAGTCTTTGGGGGCTTTGGTTGTTTGTCTG	12	+	76502356-76502405	12qC3	Mus musculus ras homolog gene family, member J (Rhoj), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISS]	Arhj; AW210585; TC10L; 1110005O19Rik; TCL	Arhj; AW210585; TC10L; 1110005O19Rik; TCL
Mus musculus	RefSeq	ILMN_198019	ILMN_231058	LOC670237	XM_980104.1	XM_980104.1		670237	94376475	XM_980104.1	LOC670237	XP_985198.1	ILMN_1241384	006290139	S	724	CAGGATCTCATGGATACACTGAGGGCAATAAGGCAGCCTAAGACCAGCTA					PREDICTED: Mus musculus similar to PRAME family member DJ1198H6.2 (LOC670237), mRNA.					
Mus musculus	RefSeq	ILMN_200494	ILMN_200494	LOC383262	XM_356953.1	XM_356953.1			38082763	XM_356953.1	LOC383262		ILMN_1249248	001820608	S	456	ACCAAGGGCAATTGGAGTATCAGCGGTAAACGGTTCATTGCGTTCTTCCC										
Mus musculus	RefSeq	ILMN_197782	ILMN_197782	LOC269515	XM_196313.1	XM_196313.1			25048806	XM_196313.1	LOC269515		ILMN_1232960	000830537	S	915	CCCAGCTTCCCTCCATGTTGGTCGATGAGCTCCGTGGATTACTTCTGTAC										
Mus musculus	RefSeq	ILMN_211203	ILMN_211203	ECHDC2	NM_026728.2	NM_026728.2		52430	142349919	NM_026728.2	Echdc2	NP_081004.1	ILMN_2687040	001090110	S	442	ATGGGTTTGCCTTAGGCGGGGGCTTGGAACTTGCCCTGGCCTGTGACCTC	4	+	107845517-107845566	4qC7	Mus musculus enoyl Coenzyme A hydratase domain containing 2 (Echdc2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2610009M20Rik; D4Ertd765e; 1300017C12Rik	2610009M20Rik; D4Ertd765e; 1300017C12Rik
Mus musculus	Riken	ILMN_206583	ILMN_206583	1600012K10RIK	ri|D830050D19|PX00200H24|AK086049|3666					AK086049	1600012K10Rik		ILMN_1254674	007400048	S	3229	CAGGCCAGCGAAGAAGTTCAGAATGGAGATTCATCACTATTTGGCCTTGC										
Mus musculus	RefSeq	ILMN_197525	ILMN_197525	LOC380927	XM_354834.1	XM_354834.1			38076423	XM_354834.1	LOC380927		ILMN_2528440	004040707	S	316	CATTCAAACCTGGCTGGGAAAATCACCGGGATGCTGCTGGAAATCGACAA										
Mus musculus	RefSeq	ILMN_198026	ILMN_198026	LOC270017	XM_194393.3	XM_194393.3			38080488	XM_194393.3	LOC270017		ILMN_2530218	005340671	S	498	CCGGAACCAGAACTGCGGGTTATGGGCTCTTACTCTAGCTGCTAACCAGG										
Mus musculus	RefSeq	ILMN_210661	ILMN_210661	MED15	NM_033609.2	NM_033609.2		94112	100816769	NM_033609.2	Med15	NP_291087.2	ILMN_1239432	005050750	S	2003	ACCTGTCTTCAACCATTCCCTGTACCGCACATTTGTGCCAGCCATGATGG	16	-	17653559-17653608	16qA3	Mus musculus mediator complex subunit 15 (Med15), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		Pcqap; AW536074; A230074L19Rik	Pcqap; AW536074; A230074L19Rik
Mus musculus	RefSeq	ILMN_210661	ILMN_210661	MED15	NM_033609.2	NM_033609.2		94112	100816769	NM_033609.2	Med15	NP_291087.2	ILMN_2622146	004880670	S	3015	ATAGGGCATCCGCAGGATCTCTGCCACCAGCAGAACCTCCACTTTCTGGG	16	-	17651632-17651681	16qA3	Mus musculus mediator complex subunit 15 (Med15), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		Pcqap; AW536074; A230074L19Rik	Pcqap; AW536074; A230074L19Rik
Mus musculus	RefSeq	ILMN_223679	ILMN_223679	CHIC2	NM_028850.1	NM_028850.1		74277	13386357	NM_028850.1	Chic2	NP_083126.1	ILMN_1253410	000110138	S	565	CCTGTTAATGTGCGGTGGTTGCTTTGTGGCTGCCTGTGCTGCTGCTGCAC	5	-	75308808-75308857	5qC3.3	Mus musculus cysteine-rich hydrophobic domain 2 (Chic2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IDA]	The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis [goid 6893] [evidence TAS]		BTL; 4930502K01Rik; 1700081B18Rik	BTL; 4930502K01Rik; 1700081B18Rik
Mus musculus	RefSeq	ILMN_218008	ILMN_218008	NUDT22	NM_026675.2	NM_026675.2		68323	142367573	NM_026675.2	Nudt22	NP_080951.1	ILMN_1227723	003890390	S	868	CCAAAGGCGCCATCCTCCTCTACAATCGCCATCCACCTCTACAGTCAGGT	19	-	7067590-7067639	19qA	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 22 (Nudt22), mRNA.				0610006K04Rik; AI851793; AW545547	0610006K04Rik; AI851793; AW545547
Mus musculus	Riken	ILMN_205802	ILMN_205802	C820002F04RIK	ri|C820002F04|PX00087H05|AK050476|2742					AK050476	C820002F04Rik		ILMN_1244575	006980520	S	630	CCAAGCATGTGATGAAGGGGAAGCAGGTGAATCTGAGCAAGGTTGGCGAG										
Mus musculus	MEEBO	ILMN_188793	ILMN_188793	2810410A03RIK	scl26709.1.1784_7						2810410A03Rik		ILMN_1243249	007610215	S	15	TGGTGCCAGTGCGGTGGGCGAGTTATGAGACCTGAGCTGCAGACTGGAAT										
Mus musculus	RefSeq	ILMN_189183	ILMN_232021	ZBTB33	NM_020256.2	NM_020256.2		56805	118442831	NM_020256.2	Zbtb33	NP_064652.2	ILMN_1247277	006760327	S	2140	GGTTGATGCTGGAAAAGAGCCTCCAGTAGGGACCACATCTACTCCTCCTC	X	+	35547241-35547290	XqA3.3	Mus musculus zinc finger and BTB domain containing 33 (Zbtb33), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Kaiso; AW260253; E130014G12Rik; Znf-kaiso	Kaiso; AW260253; E130014G12Rik; Znf-kaiso
Mus musculus	RefSeq	ILMN_189183	ILMN_232021	ZBTB33	NM_020256.2	NM_020256.2		56805	118442831	NM_020256.2	Zbtb33	NP_064652.2	ILMN_2459071	002630546	S	5037	TCCTTATCATAAGTTCTGCTTTTCATTAACTGTTACCTGATATTAGTTCA	X	+	35550138-35550187	XqA3.3	Mus musculus zinc finger and BTB domain containing 33 (Zbtb33), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Kaiso; AW260253; E130014G12Rik; Znf-kaiso	Kaiso; AW260253; E130014G12Rik; Znf-kaiso
Mus musculus	RefSeq	ILMN_204006	ILMN_232021	ZBTB33	NM_020256.2	NM_020256.2		56805	118442831	NM_020256.2	Zbtb33	NP_064652.2	ILMN_1225681	001580010	S	4866	GCCCAATTGAACAAATTCTTCAGTGACTCTGAGTGGAGGATAGTGACCAC	X	+	35549967-35550016	XqA3.3	Mus musculus zinc finger and BTB domain containing 33 (Zbtb33), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Kaiso; AW260253; E130014G12Rik; Znf-kaiso	Kaiso; AW260253; E130014G12Rik; Znf-kaiso
Mus musculus	RefSeq	ILMN_190179	ILMN_248470	HS1BP3	NM_021429.2	NM_021429.2		58240	141803082	NM_021429.2	Hs1bp3	NP_067404.1	ILMN_2768992	000520711	S	1223	AAAACGTAGTCCCAGCCTTGCCTTTCTAGTGCACGGAGGGCTTCCAGGAC	12	+	8349424-8349473	12qA1.1	Mus musculus HCLS1 binding protein 3 (Hs1bp3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence TAS]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221151	ILMN_256401	CD209B	NM_001037800.1	NM_001037800.1		69165	83699405	NM_001037800.1	Cd209b	NP_001032889.1	ILMN_2731605	000630435	S	760	AATAGAGGGGAGCCTAACAACATCGGTGAGGAAGACTGTGTCGAATTTGC	8	-	3918761-3918810	8qA1.1	Mus musculus CD209b antigen (Cd209b), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [evidence IDA]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]; The series of events in which a stimulus from a yeast is received and converted into a molecular signal [goid 1879] [evidence IDA]	Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any polysaccharide [goid 30247] [evidence IDA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]; Interacting selectively with zymosan [goid 1872] [evidence IDA]	SIGNR1; 1810030I22Rik; mSIGNR1; OtB7	SIGNR1; 1810030I22Rik; mSIGNR1; OtB7
Mus musculus	RefSeq	ILMN_209596	ILMN_209596	SEC24C	NM_172596.1	NM_172596.1		218811	28916672	NM_172596.1	Sec24c	NP_766184.1	ILMN_1216919	000620048	S	4027	TATTAACACCTTGGGGAAGTAGCAGCCTCCTTTCCAGATGGAGAAGCCCC	14	+	21513675-21513724	14qA3	Mus musculus Sec24 related gene family, member C (S. cerevisiae) (Sec24c), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		2610204K03Rik; mKIAA0079	2610204K03Rik; mKIAA0079
Mus musculus	RefSeq	ILMN_197677	ILMN_197677	LOC214456	XM_143590.3	XM_143590.3			38077285	XM_143590.3	LOC214456		ILMN_1253940	005570014	S	831	AGCAGCAGGACTTTCTGTGGGAGCACCTGCATTTCCGGTTCTTACCCTTA										
Mus musculus	RefSeq	ILMN_209264	ILMN_209264	6330403K07RIK	NM_134022.2	NM_134022.2		103712	145208002	NM_134022.2	6330403K07Rik	NP_598783.1	ILMN_2594139	007000754	S	1263	TGAGGGCTTTCCTTTGCTGCGGCCCATAGGAGGACTGTGCTAGAGAATTC				11qB4	Mus musculus RIKEN cDNA 6330403K07 gene (6330403K07Rik), mRNA.				UGS148; AI415455; RP23-83I13.10	UGS148; AI415455; RP23-83I13.10
Mus musculus	RefSeq	ILMN_197490	ILMN_197490	LOC229189	XM_143165.3	XM_143165.3			38076244	XM_143165.3	LOC229189		ILMN_2528314	000270632	S	3	GGAGGCACTTAGGATCCATGGGGACAAGTTAGGTGAGAAAGCAGAAGAGT										
Mus musculus	RefSeq	ILMN_191829	ILMN_242784	LOC634749	XM_919401.2	XM_919401.2		634749	94410007	XM_919401.2	LOC634749	XP_924494.2	ILMN_1240831	007650215	S	137	CCATCACCACTGGAAATTACAGATGGAGCTGGATCCGGCAGTTTCCAGGA					PREDICTED: Mus musculus similar to Ig heavy chain V region 733 precursor, transcript variant 3 (LOC634749), mRNA.					
Mus musculus	RefSeq	ILMN_202958	ILMN_255085	LOC667368	XM_990152.1	XM_990152.1		667368	94386335	XM_990152.1	LOC667368	XP_995246.1	ILMN_1248315	006840519	S	1891	GGAGTTATAGATCTTTGGGGGCTGGAGAGACAGAGGTTAGGGGGGCCTGC	9	+	98797541-98797590		PREDICTED: Mus musculus hypothetical protein LOC667368 (LOC667368), mRNA.					
Mus musculus	RefSeq	ILMN_212542	ILMN_212542	STAG3	NM_016964.1	NM_016964.1		50878	8394369	NM_016964.1	Stag3	NP_058660.1	ILMN_2993843	000160753	S	4056	TGCCTGTTTGCAGTGATAGGAGTTGGGTAGGGAGGGCTTTACGTCAGCAC	5	+	138753491-138753540	5qG2	Mus musculus stromal antigen 3 (Stag3), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them [goid 802] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A cohesin complex that mediates sister chromatid cohesion during meiosis; has a subunit composition distinct from that of the mitotic cohesin complex [goid 30893] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a female [goid 7066] [evidence ISS]; The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a male [goid 7065] [evidence ISS]		SA-2	SA-2
Mus musculus	RefSeq	ILMN_239405	ILMN_239405	C230021P08RIK	NM_001001884.1	NM_001001884.1		380969	49457862	NM_001001884.1	C230021P08Rik	NP_001001884.1	ILMN_3073563	004860521	I	4457	TTTGTCCCAGCTCCCACTTCAGGCCGAGCCATCTTGCGGTGCTAGGCTTC	15	-	99252812-99252861	15qF1	Mus musculus Riken cDNA C230021P08 gene (C230021P08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_239405	ILMN_239405	C230021P08RIK	NM_001001884.1	NM_001001884.1		380969	49457862	NM_001001884.1	C230021P08Rik	NP_001001884.1	ILMN_3152389	001450670	A	3996	GAAAACAGAGCGTGGATCCCAGCCGCACATCTACACCTCAGGGCCCAGCA	15	-	99253273-99253322	15qF1	Mus musculus Riken cDNA C230021P08 gene (C230021P08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_249552	ILMN_249552	OLFR1197	NM_001005225.1	NM_001005225.1		433449	61806455	NM_001005225.1	Olfr1197	NP_001005225.1	ILMN_2962810	006760273	S	209	GCTACACCTCCACTGTGATTCCCAGGCTCATCAGGGACTTGGCAGCAACA	2	-	88569496-88569545	2qE1	Mus musculus olfactory receptor 1197 (Olfr1197), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR225-10P; MOR225-14	MOR225-10P; MOR225-14
Mus musculus	RefSeq	ILMN_208943	ILMN_208943	COL14A1	NM_181277.2	NM_181277.2		12818	110347540	NM_181277.2	Col14a1	NP_851794.2	ILMN_2591027	006380048	S	5660	CCTCAGGAGACATTTGAAGAGCAGGGGCAGGCCCTCTTCTGGAGCTTCAC	15	+	55351571-55351620	15qD1	Mus musculus collagen, type XIV, alpha 1 (Col14a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AW108078; 5730412L22Rik	AW108078; 5730412L22Rik
Mus musculus	Riken	ILMN_203131	ILMN_203131	6430519M23RIK	ri|6430519M23|PX00045P01|AK032318|2794					AK032318	6430519M23Rik		ILMN_1260096	002480703	S	2353	GCACCCTCTTCTGGCCTCAGTGGGCACAGCATGCATATGGTACACAGACA										
Mus musculus	RefSeq	ILMN_216628	ILMN_216628	2400001E08RIK	NM_025605.2	NM_025605.2		66508	141802197	NM_025605.2	2400001E08Rik	NP_079881.1	ILMN_2673380	000510551	S	922	CTGACTTGGTGCTCACAGGCACCTCACTGGGGATTATGACCAGGGTCTAG	7	+	109060245-109060294	7qE3	Mus musculus RIKEN cDNA 2400001E08 gene (2400001E08Rik), mRNA.				MGC144254; MGC144253; MGC102412; MGC144270	MGC144254; MGC144253; MGC102412; MGC144270
Mus musculus	RefSeq	ILMN_192536	ILMN_249961	SFT2D2	NM_145512.3	NM_145512.3		108735	141802343	NM_145512.3	Sft2d2	NP_663487.1	ILMN_1260046	007380546	S	5051	CCTGGGCACACTCCCTGGGAGTAAAACCAAATTCAAATGCCGGTGGTGGA	1	-	167104784-167104833	1qH2.3	Mus musculus SFT2 domain containing 2 (Sft2d2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AW561909; AI506168; cI-45; 2010005O13Rik	AW561909; AI506168; cI-45; 2010005O13Rik
Mus musculus	RefSeq	ILMN_192536	ILMN_249961	SFT2D2	NM_145512.3	NM_145512.3		108735	141802343	NM_145512.3	Sft2d2	NP_663487.1	ILMN_2625035	002190093	S	189	GCCCAGGAAGGGACTCGGCCTCTTTGCAGTGTTTTACACCCTGGGTAACA	1	-	167118115-167118164	1qH2.3	Mus musculus SFT2 domain containing 2 (Sft2d2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AW561909; AI506168; cI-45; 2010005O13Rik	AW561909; AI506168; cI-45; 2010005O13Rik
Mus musculus	RefSeq	ILMN_185201	ILMN_310270	LOC675572	XM_001481199.1	XM_001481199.1		675572	149268922	XM_001481199.1	LOC675572	XP_001481249.1	ILMN_2425028	003850156	S	550	ACCTGGCCCAGATCCTGACTGCTATCAACACACCAACTTTGTCCAGCTTG	17	+	81332299-81332316:81332317-81332348	17qE3	PREDICTED: Mus musculus hypothetical LOC675572 (LOC675572), mRNA.					
Mus musculus	RefSeq	ILMN_216097	ILMN_216097	GSTA4	NM_010357.1	NM_010357.1		14860	6754081	NM_010357.1	Gsta4	NP_034487.1	ILMN_2892441	000360348	S	653	TAAGAAGTTCCTGCAACCCGGAAGTCAGAGGAAGCCTCCTCCAGATGGCC	9	+	77994779-77994828	9qE1	Mus musculus glutathione S-transferase, alpha 4 (Gsta4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence TAS]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence ISO]	mGsta4; GST 5.7; 5.7; GST	mGsta4; GST 5.7; 5.7; GST
Mus musculus	RefSeq	ILMN_184809	ILMN_257843	KIF1C	NM_153103.2	NM_153103.2		16562	145966743	NM_153103.2	Kif1c	NP_694743.2	ILMN_2421751	004780068	S	4951	CTACACAAGACCTGGTTTTAAATGATCACACTTCCCACAACCCAAAATGG				11qB3	Mus musculus kinesin family member 1C (Kif1c), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [evidence IDA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Ltxs1; B430105J22Rik; D11Bwg1349e	Ltxs1; B430105J22Rik; D11Bwg1349e
Mus musculus	RefSeq	ILMN_223646	ILMN_223646	FOXF2	NM_010225.1	NM_010225.1		14238	6753903	NM_010225.1	Foxf2	NP_034355.1	ILMN_2767050	004560246	S	2279	CGTATACTCACACTTCGCTTGTATTGTAAAAGGAGGGTATATTTGCACTT	13	+	31723151-31723200	13qA3.2	Mus musculus forkhead box F2 (Foxf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; The specification and formation of a polarized embryonic epithelial sheet [goid 42249] [evidence IMP]; The specification and formation of a polarized embryonic epithelial sheet [goid 42249] [evidence IGI]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]	FREAC2; Fkh20; LUN	FREAC2; Fkh20; LUN
Mus musculus	RefSeq	ILMN_219175	ILMN_219175	OLFR353	NM_146941.1	NM_146941.1		258943	22129030	NM_146941.1	Olfr353	NP_667152.1	ILMN_2927593	005270280	S	771	TCTGTTCCCTTCCTCTGGAGAGACCACGGAGAAGGATGTTGTAGCAGCTG	2	-	36745546-36745595	2qB	Mus musculus olfactory receptor 353 (Olfr353), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR127-3	MOR127-3
Mus musculus	MEEBO	ILMN_214075	ILMN_214075	ACAT1	scl35850.12_191	NM_144784.2			31542049	NM_144784.2	Acat1		ILMN_2643977	000020678	S	3179	ACTTGGGATGTTTAGAGGCCTGTGATGTTAGGCCCAGCAGACAGTGACGG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2 acetyl-CoA = CoA + acetoacetyl-CoA [goid 3985] [evidence IDA]		
Mus musculus	RefSeq	ILMN_245941	ILMN_245941	PRR7	NM_001030296.3	NM_001030296.3		432763	142366660	NM_001030296.3	Prr7	NP_001025467.1	ILMN_3162239	000870608	S	1169	TCCCGAGCCCCACGGGCGAACTCCTAGCCTGACTGCGAGGCTTTTTAAAT	13	+	55574366-55574415	13qB1	Mus musculus proline rich 7 (synaptic) (Prr7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]			XM_484263	XM_484263
Mus musculus	RefSeq	ILMN_223279	ILMN_223279	MCPT9	NM_010782.2	NM_010782.2		17232	61657922	NM_010782.2	Mcpt9	NP_034912.2	ILMN_2875290	000580368	S	1167	GCAGGAACCAGGACAAGAACACACCAAAATCTCTCTCCAGACTGCGACCG	14	-	56648116-56648165	14qC3	Mus musculus mast cell protease 9 (Mcpt9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MMCP9; MMCP-1	MMCP9; MMCP-1
Mus musculus	MEEBO	ILMN_212933	ILMN_212933	LOC384419	IGKV8-30_AJ235948_Ig_kappa_variable_8-30_91	XM_357637.1			38084369	XM_357637.1	LOC384419		ILMN_2631763	006580309	S	96	GTGTCAGTTGGAGAGAAGGTTACTATGAGCTGCAAGTCCAGTCAGAGCCT										
Mus musculus	RefSeq	ILMN_221404	ILMN_221404	NCOA5	NM_144892.1	NM_144892.1		228869	21450270	NM_144892.1	Ncoa5	NP_659141.1	ILMN_2794460	004390184	S	2977	GCAGTTTATGTTCTGATCTGTTTGTGTTATACGGTGGGTCCCCCTCCCCC	2	-	164825921-164825970	2qH3	Mus musculus nuclear receptor coactivator 5 (Ncoa5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CIA; MGC28864	CIA; MGC28864
Mus musculus	Riken	ILMN_204928	ILMN_204928	D130078B10RIK	ri|D130078B10|PX00186C17|AK051776|2027					AK051776	D130078B10Rik		ILMN_1232739	003190161	S	1749	GACCAGAACTCTTTCAGACGGACACTTCCCTCCAGAAGCAGAGAGGCCAC										
Mus musculus	RefSeq	ILMN_221633	ILMN_221633	MPP6	NM_019939.1	NM_019939.1		56524	9910473	NM_019939.1	Mpp6	NP_064323.1	ILMN_3007680	002810673	S	1817	ACAGTGACTCAACAAGTCAGCCTTCTGCTGGGCGAGCACATGCAGAGGTG	6	+	50148370-50148419	6qB2.3	Mus musculus membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) (Mpp6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + GMP = ADP + GDP [goid 4385] [evidence ISS]	Pals2; P55t	Pals2; P55t
Mus musculus	RefSeq	ILMN_209770	ILMN_209770	B4GALNT2	NM_008081.3	NM_008081.3		14422	124517711	NM_008081.3	B4galnt2	NP_032107.1	ILMN_2879681	006450347	S	3804	CCCTGAAACCCACCAGACAGACTAGGCCCCCTCTTTTCCAAGTATATTAG	11	-	95725105-95725154	11qD	Mus musculus beta-1,4-N-acetyl-galactosaminyl transferase 2 (B4galnt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of cell adhesion to another cell [goid 22408] [evidence ISS]; The chemical reactions and pathways involving UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 6047] [evidence IMP]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IMP]; Covalent attachment of a glycosyl residue to a lipid molecule [goid 30259] [evidence IEA]; The chemical reactions and pathways involving UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 19276] [evidence ISS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an oligosaccharide [goid 8376] [evidence ISS]	Dlb1; Galg2; Galgt2; AI593864; Dlb-1; Ggm3	Dlb1; Galg2; Galgt2; AI593864; Dlb-1; Ggm3
Mus musculus	RefSeq	ILMN_185567	ILMN_185567	TMEM16B	NM_153589.1	NM_153589.1		243634	23956389	NM_153589.1	Tmem16b	NP_705817.1	ILMN_2802590	002750408	S	3379	GGCCACTGGACCTGGTGGTAAGGAAGAAAGGTCCTGTCCAGGTTTGTCTG	6	+	125990071-125990120	6qF3	Mus musculus transmembrane protein 16B (Tmem16b), mRNA.				BC033409; MGC38715	BC033409; MGC38715
Mus musculus	RefSeq	ILMN_209398	ILMN_209398	PAFAH1B1	NM_013625.2	NM_013625.2		18472	142354041	NM_013625.2	Pafah1b1	NP_038653.1	ILMN_2595443	004050221	S	917	CGTTCAAATGGCTATGAAGAGGCATATTCCGTTTTTAAAAAGGAAGCTGA	11	-	74504028-74504077	11qB5	Mus musculus platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit (Pafah1b1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; The area of a motile cell closest to the direction of movement [goid 31252] [evidence IDA]; A specialized primary cilium that contains a 9 + 0 arrangement of microtubules, radial spokes, and a dynein apparatus, but no inner doublet microtubules. Motile primary cilia display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface [goid 31512] [evidence IDA]; An immotile primary cilium that may be missing the central pair of microtubules, or the central pair of microtubules and outer dynein arms. Some primary cilia also have altered arrangements of outer microtubules (fewer than nine and/or not always present as doublets). Nonmotile primary cilia typically function as sensory organelles that concentrate and organize sensory signaling molecules [goid 31513] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IGI]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; Any process that modulates the activity of a GTPase of the Rho family [goid 32319] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IGI]; The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IDA]; The formation of the acrosome from the spermatid Golgi [goid 1675] [evidence IMP]; The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IGI]; The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex [goid 21819] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a phosphorylated protein [goid 51219] [evidence IPI]	Mdsh; LIS-1; Pafaha; MGC25297; MMS10-U; Ms10u; Lis1	Mdsh; LIS-1; Pafaha; MGC25297; MMS10-U; Ms10u; Lis1
Mus musculus	RefSeq	ILMN_209398	ILMN_209398	PAFAH1B1	NM_013625.2	NM_013625.2		18472	142354041	NM_013625.2	Pafah1b1	NP_038653.1	ILMN_1239002	006180706	S	5532	GAGTTAGAAGCCGGTCCTGACACTGACATGAAGCCACACATTGATTTCAT	11	-	74487672-74487721	11qB5	Mus musculus platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit (Pafah1b1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; The area of a motile cell closest to the direction of movement [goid 31252] [evidence IDA]; A specialized primary cilium that contains a 9 + 0 arrangement of microtubules, radial spokes, and a dynein apparatus, but no inner doublet microtubules. Motile primary cilia display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface [goid 31512] [evidence IDA]; An immotile primary cilium that may be missing the central pair of microtubules, or the central pair of microtubules and outer dynein arms. Some primary cilia also have altered arrangements of outer microtubules (fewer than nine and/or not always present as doublets). Nonmotile primary cilia typically function as sensory organelles that concentrate and organize sensory signaling molecules [goid 31513] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IGI]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; Any process that modulates the activity of a GTPase of the Rho family [goid 32319] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IGI]; The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IDA]; The formation of the acrosome from the spermatid Golgi [goid 1675] [evidence IMP]; The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IGI]; The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex [goid 21819] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a phosphorylated protein [goid 51219] [evidence IPI]	Mdsh; LIS-1; Pafaha; MGC25297; MMS10-U; Ms10u; Lis1	Mdsh; LIS-1; Pafaha; MGC25297; MMS10-U; Ms10u; Lis1
Mus musculus	RefSeq	ILMN_207505	ILMN_207505	1200014P05RIK	XM_141350.1	XM_141350.1			20912500	XM_141350.1	1200014P05Rik		ILMN_1260469	006330162	I	1012	ATCCAGGATGAGATGCAGCCAGTGCTAGTGGTAGCAGCGGGGCTCTTCTG										
Mus musculus	RefSeq	ILMN_216724	ILMN_216724	OLR1	NM_138648.2	NM_138648.2		108078	134053880	NM_138648.2	Olr1	NP_619589.2	ILMN_2745565	003440068	S	2246	ATCCAAATTTAAAAATAAATTCGATGATTACCTGTAGTGGTCATATTACC	6	-	129436538-129436587	6qF3	Mus musculus oxidized low density lipoprotein (lectin-like) receptor 1 (Olr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	LOX-1; Scare1; SR-EI	LOX-1; Scare1; SR-EI
Mus musculus	RefSeq	ILMN_210846	ILMN_210846	H2-DMB1	NM_010387.2	NM_010387.2		14999	31981707	NM_010387.2	H2-DMb1	NP_034517.2	ILMN_1244977	004900754	S	1056	CTTCAGGACACCCCACTTTCTTGTGTCATACTGCCTCTATTCAGGTCCCC	17	+	34292789-34292823:34294191-34294205	17qB1	Mus musculus histocompatibility 2, class II, locus Mb1 (H2-DMb1), mRNA.	A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]		H-2Mb1; H2-Mb1; AI385589	H-2Mb1; H2-Mb1; AI385589
Mus musculus	RefSeq	ILMN_215851	ILMN_215851	SLC39A3	NM_134135.1	NM_134135.1		106947	19527367	NM_134135.1	Slc39a3	NP_598896.1	ILMN_2977240	005720484	S	3126	TTAGTGAACGCTCCCACAGAAGGGAAATCCAGGGACGCTGTCGGTGAGGA	10	-	80491872-80491921	10qC1	Mus musculus solute carrier family 39 (zinc transporter), member 3 (Slc39a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]	MGC7461; Zip3; AI845814; MGC109671	MGC7461; Zip3; AI845814; MGC109671
Mus musculus	RefSeq	ILMN_215851	ILMN_215851	SLC39A3	NM_134135.1	NM_134135.1		106947	19527367	NM_134135.1	Slc39a3	NP_598896.1	ILMN_2695367	000060709	S	434	TTTATAGACCTGGAGACCTTCAACGCCGGCTCAGATGCGGGCAGCGACTC	10	-	80494263-80494312	10qC1	Mus musculus solute carrier family 39 (zinc transporter), member 3 (Slc39a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]	MGC7461; Zip3; AI845814; MGC109671	MGC7461; Zip3; AI845814; MGC109671
Mus musculus	MEEBO	ILMN_187752	ILMN_187752	2510010F15RIK	scl17657.12_466				31982648	NM_026454	2510010F15Rik		ILMN_2590349	006110474	S	455	TCTCAAAGGATCCCGGACATCAGCCTCCACATCTGACTCTACCCGGAGGG										
Mus musculus	RefSeq	ILMN_221051	ILMN_221051	UGT2B38	NM_133894.1	NM_133894.1		100559	19527109	NM_133894.1	Ugt2b38	NP_598655.1	ILMN_2730424	004780707	S	1728	TTTGGAAATTTTTACTGTGTAAGAAGACATGTAAATCTGTGGATACTGAT	5	-	87839065-87839114	5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide B38 (Ugt2b38), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AA986709; 9430041C03Rik	AA986709; 9430041C03Rik
Mus musculus	Riken	ILMN_205878	ILMN_205878	TOP2A	ri|2810021D13|ZX00034J13|AK028218|2851					AK028218	Top2a		ILMN_1255436	000430202	S	2497	GCAGGGCTGGATGACATTTGAGAACGGTAACCTGGATGGACAGCAAAGGA						A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells [goid 30261] [evidence IMP]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IMP]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA [goid 3916] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IGI]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IDA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IGI]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_207396	ILMN_207396	E130302P19RIK	ri|E130302P19|PX00675O23|AK087474|2020					AK087474	E130302P19Rik		ILMN_1236354	006650446	S	1874	TGCCTGCTGAAGTGTCATCGAGTGCATCGCTCCTGAGAGGACTGCTGTGG										
Mus musculus	RefSeq	ILMN_211295	ILMN_211295	ARHGAP25	NM_175476.3	NM_175476.3		232201	83582812	NM_175476.3	Arhgap25	NP_780685.2	ILMN_2614392	000770619	S	2429	ATTTATGAAAGCAAAATGAGTGAGAAAATTATATTCAAATAAAGAAAACA	6	-	87409399-87409448	6qD1	Mus musculus Rho GTPase activating protein 25 (Arhgap25), transcript variant 2, mRNA. XM_899325 XM_899332 XM_899339 XM_899344 XM_914946 XM_923470 XM_923471 XM_923481 XM_923488 XM_923492 XM_923496 XM_923499 XM_923504	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A130039I20Rik	A130039I20Rik
Mus musculus	RefSeq	ILMN_211295	ILMN_211295	ARHGAP25	NM_175476.3	NM_175476.3		232201	83582812	NM_175476.3	Arhgap25	NP_780685.2	ILMN_3076266	003060215	I	15	GAGGCAGCTGGACGGCAGGAGCTGGTCGTCAGTTGGGCTCCTTTCAGGAG	6	-	87446230-87446279	6qD1	Mus musculus Rho GTPase activating protein 25 (Arhgap25), transcript variant 2, mRNA. XM_899325 XM_899332 XM_899339 XM_899344 XM_914946 XM_923470 XM_923471 XM_923481 XM_923488 XM_923492 XM_923496 XM_923499 XM_923504	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A130039I20Rik	A130039I20Rik
Mus musculus	RefSeq	ILMN_211295	ILMN_211295	ARHGAP25	NM_175476.3	NM_175476.3		232201	83582812	NM_175476.3	Arhgap25	NP_780685.2	ILMN_3155245	005890768	A	2363	CTCCAGTGCTGGCCAACTGAGGGCTGCTTGGAGAGGCTGAACTGTTGGAA	6	-	87409465-87409514	6qD1	Mus musculus Rho GTPase activating protein 25 (Arhgap25), transcript variant 2, mRNA. XM_899325 XM_899332 XM_899339 XM_899344 XM_914946 XM_923470 XM_923471 XM_923481 XM_923488 XM_923492 XM_923496 XM_923499 XM_923504	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A130039I20Rik	A130039I20Rik
Mus musculus	MEEBO	ILMN_223057	ILMN_223057	PLSCR4	scl36620.9_485	NM_178711.2			31341304	NM_178711.2	Plscr4		ILMN_2758717	001030315	S	2421	GTCCTTTGCCCACCCACACCCCATTCTAGCACTTTGCATCACGTTGATAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214782	ILMN_214782	OSBPL3	NM_027881.1	NM_027881.1		71720	21687075	NM_027881.1	Osbpl3	NP_082157.1	ILMN_2974064	002190743	S	2783	TCCTGTAACTTTGCCCACATTTGCTTCCGGAAGCAGCGCACAGCTGTCTG	6	-	50226577-50226626	6qB2.3	Mus musculus oxysterol binding protein-like 3 (Osbpl3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6720421I08Rik; ORP3; 1200014M06Rik; MGC102333; OSBP3; A530055M08	6720421I08Rik; ORP3; 1200014M06Rik; MGC102333; OSBP3; A530055M08
Mus musculus	RefSeq	ILMN_189784	ILMN_189784	WDR26	NM_145514.3	NM_145514.3		226757	83649738	NM_145514.3	Wdr26	NP_663489.3	ILMN_2464326	006450164	S	1455	CCTATTATGTCATTTACTATTTCCAAAAATGGCCGATTAGCTTTGTTAAA	1	-	183113870-183113919	1qH4	Mus musculus WD repeat domain 26 (Wdr26), mRNA. XM_924005 XM_924010 XM_924013	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			AA693241; C77982; AU044014; 1600024A01Rik; AI447817	AA693241; C77982; AU044014; 1600024A01Rik; AI447817
Mus musculus	RefSeq	ILMN_197414	ILMN_254133	GM355	XM_001003757.1	XM_001003757.1		241634	94366886	XM_001003757.1	Gm355	XP_001003757.1	ILMN_1250680	003840088	S	941	GGGTCACGCCAGATCAGTGTGCAGAGATCCAGAACCAGAACCCACAGCAC				2qF1	PREDICTED: Mus musculus gene model 355, (NCBI) (Gm355), mRNA.					
Mus musculus	MEEBO	ILMN_195300	ILMN_195300	TFPI	scl0320048.1_155				33859643	NM_011576	Tfpi		ILMN_1248790	005960187	S	884	GTACAGATGAGTGACTACGTAACTGATGGAAATACTGTAACTGATCGCAG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195300	ILMN_195300	TFPI	scl0320048.1_155				33859643	NM_011576	Tfpi		ILMN_2514346	002680053	S	2	TACATTCACAAGCAATTAAGGATAGTAATAATATGTAGAGTAGTATATAT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195300	ILMN_195300	TFPI	scl0320048.1_155				33859643	NM_011576	Tfpi		ILMN_2691522	006770465	S	892	GAGTGACTACGTAACTGATGGAAATACTGTAACTGATCGCAGTACTGTAA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]		
Mus musculus	Riken	ILMN_205223	ILMN_205223	E130318P21RIK	ri|E130318P21|PX00209E19|AK053895|2327					AK053895	E130318P21Rik		ILMN_1214332	004490484	S	1904	GCAGGCTGGCCTTGAACTCAAAGATATCTGCCTGCCTACCACCACCAGGC										
Mus musculus	Riken	ILMN_206495	ILMN_206495	ECAC2	ri|D430040H23|PX00195J18|AK085123|2636					AK085123	Ecac2		ILMN_1248472	007650537	S	2340	GTCACCAGGATGGAATCTGTGGGAGGGAAGGGCTGCAAGGAGCTTAGAGG										
Mus musculus	MEEBO	ILMN_191550	ILMN_191550	E430012M05RIK	scl47712.11_291				31343310	NM_177310	E430012M05Rik		ILMN_2480052	000510040	S	13	GCTGCATCATTAATGTAAGCATTTAAGTGAAGGGTACCCTATCTGGTACC										
Mus musculus	Riken	ILMN_201685	ILMN_201685	SET	ri|2610030F17|ZX00034A04|AK011630|1083					AK011630	Set		ILMN_2543767	001780241	S	938	TATAGACGGTGAGCAAGGGTGGGTTTGAGGTGTCTGGGGTAGGTGGGCCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]			
Mus musculus	RefSeq	ILMN_231024	ILMN_231024	AHNAK	NM_009643.1	NM_009643.1		66395	61743960	NM_009643.1	Ahnak	NP_033773.1	ILMN_3159275	005890021	A	319	CCCACGGGCTGACCATTGCCCAGAGGGATGATGGAGTCTTTGTTCAGGAG	19	+	9074651-9074700	19qA	Mus musculus AHNAK nucleoprotein (desmoyokin) (Ahnak), transcript variant 1, mRNA.	A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence ISS]			2310047C17Rik; AA589382; AV091586; DY6; 1110004P15Rik	2310047C17Rik; AA589382; AV091586; DY6; 1110004P15Rik
Mus musculus	RefSeq	ILMN_189147	ILMN_231024	AHNAK	NM_009643.1	NM_009643.1		66395	61743960	NM_009643.1	Ahnak	NP_033773.1	ILMN_2458765	000870333	S	17833	TCCCAGCCTAGTTTGGTGCTCGAGGTGAGAGGGGATTTGAATCTGTTTGC	19	+	9093419-9093468	19qA	Mus musculus AHNAK nucleoprotein (desmoyokin) (Ahnak), transcript variant 1, mRNA.	A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence ISS]			2310047C17Rik; AA589382; AV091586; DY6; 1110004P15Rik	2310047C17Rik; AA589382; AV091586; DY6; 1110004P15Rik
Mus musculus	RefSeq	ILMN_231024	ILMN_231024	AHNAK	NM_009643.1	NM_009643.1		66395	61743960	NM_009643.1	Ahnak	NP_033773.1	ILMN_3079919	002370520	I	17723	TCTGAAGGTTGGACCCGTGAAGCCCTGGCATAGACCTGAAGAGGTGGCAG	19	+	9093309-9093358	19qA	Mus musculus AHNAK nucleoprotein (desmoyokin) (Ahnak), transcript variant 1, mRNA.	A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence ISS]			2310047C17Rik; AA589382; AV091586; DY6; 1110004P15Rik	2310047C17Rik; AA589382; AV091586; DY6; 1110004P15Rik
Mus musculus	RefSeq	ILMN_217728	ILMN_217728	BC003267	NM_145591.4	NM_145591.4		233987	146149072	NM_145591.4	BC003267	NP_663566.1	ILMN_1222712	003890372	S	2048	ATAACTGAAGCTGTTGTTAGGAATAGTCAGTATGTTATGAAAAATAAGGA				8qA1.1	Mus musculus cDNA sequence BC003267 (BC003267), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216090	ILMN_216090	TIMM8B	NM_013897.1	NM_013897.1		30057	7305578	NM_013897.1	Timm8b	NP_038925.1	ILMN_2667219	004610273	S	41	GACAATGGCCGAGCTTGGTGAAGCGGACGAAGCGGAGTTACAACGCCTGG	9	+	50412055-50412060:50412061-50412104	9qA5.3	Mus musculus translocase of inner mitochondrial membrane 8 homolog b (yeast) (Timm8b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Tim8b	Tim8b
Mus musculus	RefSeq	ILMN_216090	ILMN_216090	TIMM8B	NM_013897.1	NM_013897.1		30057	7305578	NM_013897.1	Timm8b	NP_038925.1	ILMN_2821014	000430390	S	256	CCGGTCGGTTTGCCCAGATCGTACAGAAAGGAGGGCAGTAGGCCATACCT	9	+	50413163-50413205:50413206-50413212	9qA5.3	Mus musculus translocase of inner mitochondrial membrane 8 homolog b (yeast) (Timm8b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Tim8b	Tim8b
Mus musculus	RefSeq	ILMN_187233	ILMN_241658	DSG1C	NM_181680.1	NM_181680.1		211924	32129204	NM_181680.1	Dsg1c	NP_859008.1	ILMN_2597795	005090730	S	2365	CCCACAGCATATGGAGCAACTTGCTAGTGGACACCCAAGCATATCCCCAC	18	+	20441809-20441858	18qA2	Mus musculus desmoglein 1 gamma (Dsg1c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence TAS]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	dsg1g; 9330156N18; Dsg1gamma; Dsg6	dsg1g; 9330156N18; Dsg1gamma; Dsg6
Mus musculus	RefSeq	ILMN_241658	ILMN_241658	DSG1C	NM_181680.1	NM_181680.1		211924	32129204	NM_181680.1	Dsg1c	NP_859008.1	ILMN_3001560	002600279	S	2910	ACCGCTGAGTTAGGTGGGGTTGGAGGCATAGGCAGCAGTGGCATTGTTAG	18	+	20442354-20442403	18qA2	Mus musculus desmoglein 1 gamma (Dsg1c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence TAS]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	dsg1g; 9330156N18; Dsg1gamma; Dsg6	dsg1g; 9330156N18; Dsg1gamma; Dsg6
Mus musculus	MEEBO	ILMN_192144	ILMN_192144	2010001M06RIK	scl25932.2.1_17						2010001M06Rik		ILMN_2485410	000620192	S	10	ACTGGGGGACACCCGGGCGGAACCTTCCCTGGAGCAAGTACTGCAGGAGA										
Mus musculus	Riken	ILMN_205856	ILMN_205856	A830054D10RIK	ri|A830054D10|PX00155O18|AK043933|4138					AK043933	A830054D10Rik		ILMN_2575734	006200739	S	2195	CCCCCTTTGCTGATGTGCAACTTTCCTCCCAGTTACCCCTAAGGCAGAGC										
Mus musculus	RefSeq	ILMN_213849	ILMN_213849	HGS	NM_008244.2	NM_008244.2		15239	31982285	NM_008244.2	Hgs	NP_032270.2	ILMN_2641438	003940044	S	2073	CTCCCAGCCATCTCACAGCCTCCACAGACCAGCAACATAGGCTACATGGG	11	+	120344084-120344133	11qE2	Mus musculus HGF-regulated tyrosine kinase substrate (Hgs), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Hrs; Hgr; ZFYVE8	Hrs; Hgr; ZFYVE8
Mus musculus	RefSeq	ILMN_213849	ILMN_213849	HGS	NM_008244.2	NM_008244.2		15239	31982285	NM_008244.2	Hgs	NP_032270.2	ILMN_2855397	001440564	S	2598	CAAGTAGAACCTTCTCTGGAGAGTGCCCGGCTGTGTTGGGTGCCACAGGT	11	+	120345047-120345096	11qE2	Mus musculus HGF-regulated tyrosine kinase substrate (Hgs), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Hrs; Hgr; ZFYVE8	Hrs; Hgr; ZFYVE8
Mus musculus	MEEBO	ILMN_222591	ILMN_222591	1300013F15RIK	scl15810.7.1_1	XM_129663.1			20833824	XM_129663.1	1300013F15Rik		ILMN_1246673	004480138	S	1013	GGATCCAGACACTGGCATCTCGGACAGGAAGGAGCCTCTGGAAACACTGA										
Mus musculus	RefSeq	ILMN_204425	ILMN_225822	DDHD2	XM_983745.1	XM_983745.1		72108	94384766	XM_983745.1	Ddhd2	XP_988839.1	ILMN_2564872	006980601	S	1309	CAGCAGCTGGAAGACGCATATGGCTCTGGTAGGAAGAAACTGATGACTCT					PREDICTED: Mus musculus DDHD domain containing 2 (Ddhd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209223	ILMN_209223	KIFC3	NM_010631.2	NM_010631.2		16582	84042514	NM_010631.2	Kifc3	NP_034761.2	ILMN_1229531	002190082	S	2954	GAGAAGACTTGAGGAACCAGCTGGGGGGTTAGGGAGAGCAAGAGCATCTC	8	-	97623994-97624043	8qD1	Mus musculus kinesin family member C3 (Kifc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [evidence IMP]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of movement along a microtubule toward the minus end, coupled to the hydrolysis of ATP (or GTP) [goid 8569] [evidence TAS]	AI325457; BB123200	AI325457; BB123200
Mus musculus	RefSeq	ILMN_254530	ILMN_254530	OLFR707	NM_001005570.2	NM_001005570.2		194433	116174767	NM_001005570.2	Olfr707	NP_001005570.2	ILMN_3082313	005960685	A	859	CCCATCATTTACAGCCTGAGAAACAAGGATGTGAAAGGGGCCCTCAGGAG	7	-	114034713-114034762	7qE3	Mus musculus olfactory receptor 707 (Olfr707), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR260-8P	MOR260-8P
Mus musculus	RefSeq	ILMN_254530	ILMN_254530	OLFR707	NM_001005570.2	NM_001005570.2		194433	116174767	NM_001005570.2	Olfr707	NP_001005570.2	ILMN_3011836	001410446	I	3	GGGTGAAGACAACAGAACCTCTGTGACAGAATTCATCTTCCTGGGCCTCT	7	-	114035569-114035618	7qE3	Mus musculus olfactory receptor 707 (Olfr707), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR260-8P	MOR260-8P
Mus musculus	RefSeq	ILMN_198787	ILMN_254530	OLFR707	NM_001005570.2	NM_001005570.2		194433	116174767	NM_001005570.2	Olfr707	NP_001005570.2	ILMN_1256882	003450711	S	447	GGCCAGTGGTGCACTTGTGTCCCTGGTGGATACCACATTCACATTACGTC	7	-	114035125-114035174	7qE3	Mus musculus olfactory receptor 707 (Olfr707), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR260-8P	MOR260-8P
Mus musculus	RefSeq	ILMN_212064	ILMN_212064	PFKL	NM_008826.2	NM_008826.2		18641	31560652	NM_008826.2	Pfkl	NP_032852.2	ILMN_2871325	006590661	S	3155	TCTTGGCTGATTGCTGCCCTTCAGGAGGTTCTTGAGGTCGGGACGTTGGC	10	-	77390543-77390592	10qC1	Mus musculus phosphofructokinase, liver, B-type (Pfkl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IDA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AA407869	AA407869
Mus musculus	RefSeq	ILMN_244976	ILMN_244976	SSXB9	NM_199066.1	NM_199066.1		387131	51468091	NM_199066.1	Ssxb9	NP_951021.1	ILMN_2999956	003440521	S	551	TGCCTCTGTAAAGAATGATTCCAACTTGGCAGAAACTAGTGGCATTCGGG	X	+	7948933-7948964:7951816-7951833	XqA1.1	Mus musculus synovial sarcoma, X member B, breakpoint 9 (Ssxb9), mRNA.					
Mus musculus	Riken	ILMN_203560	ILMN_203560	9330200H04RIK	ri|9330200H04|PX00107H17|AK034497|3215					AK034497	9330200H04Rik		ILMN_1226828	003370040	S	2907	GGGCGAAGGAGTTGCATTGTTCCCTGGAGTCCAGTTGTTTTCCACTGGCT										
Mus musculus	Riken	ILMN_205410	ILMN_205410	2810003O05RIK	ri|E130008E14|PX00207L08|AK053297|2186					AK053297	2810003O05Rik		ILMN_1237941	000540646	S	1856	AGGAGTGCCGATGGCCGACTCATAACCCACAAGAGTTTACGAATGGGGGC										
Mus musculus	RefSeq	ILMN_197576	ILMN_241825	TIMM8A2	NM_001037744.1	NM_001037744.1		223262	83627686	NM_001037744.1	Timm8a2	NP_001032833.1	ILMN_1214839	006590484	S	592	CTGGCAGACTCAACACCCTCTCCTGACCTAGACACAGAGCACACTTACGT	14	+	122437321-122437370	14qE5	Mus musculus translocase of inner mitochondrial membrane 8 homolog a2 (yeast) (Timm8a2), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC117751	MGC117751
Mus musculus	RefSeq	ILMN_241825	ILMN_241825	TIMM8A2	NM_001037744.1	NM_001037744.1		223262	83627686	NM_001037744.1	Timm8a2	NP_001032833.1	ILMN_2983631	007380504	S	594	GGCAGACTCAACACCCTCTCCTGACCTAGACACAGAGCACACTTACGTTC	14	+	122437323-122437372	14qE5	Mus musculus translocase of inner mitochondrial membrane 8 homolog a2 (yeast) (Timm8a2), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC117751	MGC117751
Mus musculus	RefSeq	ILMN_219966	ILMN_219966	ACVRL1	NM_009612.2	NM_009612.2		11482	108936964	NM_009612.2	Acvrl1	NP_033742.2	ILMN_1248328	005860341	S	1550	CCCCAGTTTTGAGGACATGAAAAAGGTGGTGTGCGTTGACCAGCAGACAC	15	+	100971547-100971596	15qF2	Mus musculus activin A receptor, type II-like 1 (Acvrl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with activin-bound type II activin receptor to initiate a change in cell activity; upon binding, acts as a downstream transducer of activin signals [goid 16361] [evidence ISO]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence ISO]	Acvrlk1; Alk1; Alk-1; AI115505; AI427544	Acvrlk1; Alk1; Alk-1; AI115505; AI427544
Mus musculus	RefSeq	ILMN_258332	ILMN_258332	C330021F23RIK	NM_001024728.1	NM_001024728.1		546049	85701557	NM_001024728.1	C330021F23Rik	NP_001019899.1	ILMN_3102795	000650364	A	1001	CTGTTTGTCATGCCACTTCTGATCCCGTCGGTGACTGCGGAGCTTCCGGG	8	+	3584156-3584205	8qA1.1	Mus musculus RIKEN cDNA C330021F23 gene (C330021F23Rik), mRNA.				2610027C06Rik	2610027C06Rik
Mus musculus	Riken	ILMN_206463	ILMN_206463	EDIL3	ri|D230009J11|PX00187P17|AK084215|2681					AK084215	Edil3		ILMN_2580261	000070050	S	1779	GTGGGGAACTTGGGTCTGCTGTCCAGCTATGTCTGTACAGGAATGTCTTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	Riken	ILMN_205773	ILMN_205773	D130003E24RIK	ri|D130003E24|PX00182K16|AK051132|2366					AK051132	D130003E24Rik		ILMN_1241177	002030138	S	2139	GGAGAGGGAGAGCTAATGGATCTGGGAGGGTGTGGAGAACAGCATTGCCC										
Mus musculus	RefSeq	ILMN_190709	ILMN_190709	V1RA8	NM_053223.1	NM_053223.1		113850	21361227	NM_053223.1	V1ra8	NP_444453.1	ILMN_2472587	001500603	S	789	TATTACAGGGAAATCCACTGCCCTATTGTGTCCAGATTCTTGTCGCTCAT	6	+	90153599-90153648	6qD1	Mus musculus vomeronasal 1 receptor, A8 (V1ra8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223235	ILMN_223235	OLFR978	NM_147105.2	NM_147105.2		259109	116174759	NM_147105.2	Olfr978	NP_667316.2	ILMN_2761233	004280039	S	880	GTGAAGAAAGCACTGTTGAAAATAAAATATGGGTCTGTGCTTCCTCAGGA	9	+	39802276-39802325	9qA5.1	Mus musculus olfactory receptor 978 (Olfr978), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR223-3	MOR223-3
Mus musculus	RefSeq	ILMN_200298	ILMN_200298	LOC386164	XM_359102.1	XM_359102.1			38081254	XM_359102.1	LOC386164		ILMN_1231088	006330647	S	957	CCACGACAAAACCAAGTTCACACAATACCTTTCCACGAATCCAGCCCTTC										
Mus musculus	RefSeq	ILMN_214263	ILMN_214263	RPUSD1	NM_028009.3	NM_028009.3		106707	146141103	NM_028009.3	Rpusd1	NP_082285.1	ILMN_2646123	001260546	S	1298	TTAGCCTACCTGGACTTGGGTCACCTGCAGCCCCCAACCTGTCTCTTGCT				17qA3.3	Mus musculus RNA pseudouridylate synthase domain containing 1 (Rpusd1), mRNA.		The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]	2310051D06Rik; Rlucl; AU019540	2310051D06Rik; Rlucl; AU019540
Mus musculus	RefSeq	ILMN_219800	ILMN_219800	FAHD1	NM_023480.2	NM_023480.2		68636	115311548	NM_023480.2	Fahd1	NP_075969.1	ILMN_1218891	004120692	S	1239	GCACTCCAGTTGATTTTTACTTGGGAAAGTCCTCCACCTCAAAGCCAGAT	17	-	24985959-24986008	17qA3.3	Mus musculus fumarylacetoacetate hydrolase domain containing 1 (Fahd1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AV002085; 1110025H10Rik	AV002085; 1110025H10Rik
Mus musculus	RefSeq	ILMN_218270	ILMN_218270	SYNJ2BP	NM_025292.2	NM_025292.2		24071	31543792	NM_025292.2	Synj2bp	NP_079568.1	ILMN_2752867	005820703	S	217	GGACAGATCAACAGTATGTCTCCAACGACAGTGGCATCTACGTCAGCCGT	12	-	82429739-82429788	12qD1	Mus musculus synaptojanin 2 binding protein (Synj2bp), mRNA.	The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 7028] [evidence ISO]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ARIP2; ActRIP4; OMP25; ARIP2a	ARIP2; ActRIP4; OMP25; ARIP2a
Mus musculus	RefSeq	ILMN_209776	ILMN_259771	USPL1	NM_001013378.1	NM_001013378.1		231915	85701435	NM_001013378.1	Uspl1	NP_001013396.1	ILMN_2599110	003520274	S	3003	ATGCATAGCCTTGTGTTCTAGCCATGGGAAGCTGTGAGCTACTGGAGTCT	5	+	150026914-150026963	5qG3	Mus musculus ubiquitin specific peptidase like 1 (Uspl1), mRNA. XM_900481 XM_900488 XM_900492 XM_900499 XM_900504 XM_905468 XM_919327 XM_919336 XM_919343 XM_919346 XM_919353 XM_919361 XM_919381 XM_919390 XM_919400		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	E430026A01Rik; D030048C09	E430026A01Rik; D030048C09
Mus musculus	RefSeq	ILMN_209776	ILMN_259771	USPL1	NM_001013378.1	NM_001013378.1		231915	85701435	NM_001013378.1	Uspl1	NP_001013396.1	ILMN_2637466	002070064	S	150	ACTCGGAATGACGGATGATTCTCTGAAGATTGGAAATGGTTTGCCACTGG	5	+	149999344-149999350:149999351-149999393	5qG3	Mus musculus ubiquitin specific peptidase like 1 (Uspl1), mRNA. XM_900481 XM_900488 XM_900492 XM_900499 XM_900504 XM_905468 XM_919327 XM_919336 XM_919343 XM_919346 XM_919353 XM_919361 XM_919381 XM_919390 XM_919400		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	E430026A01Rik; D030048C09	E430026A01Rik; D030048C09
Mus musculus	RefSeq	ILMN_211535	ILMN_211535	MED30	NM_027212.2	NM_027212.2		69790	141801965	NM_027212.2	Med30	NP_081488.1	ILMN_2616792	003520102	S	426	GATGGCTCAAAGAACGACGACCGGGCTGGTCCACCTCGTTTTGCTAGCGA	15	+	52552603-52552652	15qC	Mus musculus mediator complex subunit 30 (Med30), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1810038N03Rik; TRAP25; 2510044J04Rik; Thrap6	1810038N03Rik; TRAP25; 2510044J04Rik; Thrap6
Mus musculus	RefSeq	ILMN_198414	ILMN_260747	GM98	XM_981099.2	XM_981099.2		225908	149270628	XM_981099.2	Gm98	XP_986193.2	ILMN_1248687	001070113	S	2883	TTCACACAGACCCAGGGCCAGCTAGACCCAGCGCCATCCCTGACCTCCAT				19qA	PREDICTED: Mus musculus gene model 98, (NCBI) (Gm98), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_218301	ILMN_218301	SMYD3	NM_027188.3	NM_027188.3		69726	118130353	NM_027188.3	Smyd3	NP_081464.1	ILMN_1231094	002190092	S	3363	CCTCCTGAATACCCCTCCAACACAGGAATCATCATCTCAAATCCTAGGTC	1	-	180885518-180885567	1qH4	Mus musculus SET and MYND domain containing 3 (Smyd3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	Zmynd1; 2410008A19Rik	Zmynd1; 2410008A19Rik
Mus musculus	RefSeq	ILMN_185930	ILMN_242104	DACT1	NM_021532.3	NM_021532.3		59036	118130441	NM_021532.3	Dact1	NP_067507.2	ILMN_1230235	001300497	S	2068	AACTACACCACCAACTGCTTCGGCGACAGCGAGTCCAGCGTGAGCGAAGG	12	+	72419612-72419661	12qC3	Mus musculus dapper homolog 1, antagonist of beta-catenin (xenopus) (Dact1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	THYEX3; AI115603; DAPPER1; MTNG3; HDPR1; Frd1; FRODO; DAPPER; 4921528D17Rik	THYEX3; AI115603; DAPPER1; MTNG3; HDPR1; Frd1; FRODO; DAPPER; 4921528D17Rik
Mus musculus	RefSeq	ILMN_197569	ILMN_233981	LMO7	XM_895783.2	XM_895783.2		380928	94397287	XM_895783.2	Lmo7	XP_900876.1	ILMN_1217159	005960446	S	5564	GGTTTGAGGAGGGCACTCAATTTTCTTTACAAGGACTGTTGATGCTAAGC	14	+	100821114-100821163	14qE2.3	PREDICTED: Mus musculus LIM domain only 7, transcript variant 11 (Lmo7), mRNA.	The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISO]; An adherens junction which connects two cells to each other [goid 5913] [evidence ISO]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with actinin, any member of a family of proteins that crosslink F-actin [goid 42805] [evidence ISO]		
Mus musculus	RefSeq	ILMN_217412	ILMN_217412	0610012H03RIK	NM_028747.1	NM_028747.1		74088	21311852	NM_028747.1	0610012H03Rik	NP_083023.1	ILMN_2682917	003460754	S	1002	ACCCCTTTAAGAGAAGTGCACAGTGAGGTTTACAGACAGAAGCCATTCAC	2	+	105219423-105219472	2qE3	Mus musculus RIKEN cDNA 0610012H03 gene (0610012H03Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-444H3.1	RP23-444H3.1
Mus musculus	RefSeq	ILMN_217412	ILMN_217412	0610012H03RIK	NM_028747.1	NM_028747.1		74088	21311852	NM_028747.1	0610012H03Rik	NP_083023.1	ILMN_2972403	004260014	S	1438	GCTTCTCTGCCACATCCTTAGCCTATATTCATTACCTGTGTCATGGGTGG	2	+	105219859-105219908	2qE3	Mus musculus RIKEN cDNA 0610012H03 gene (0610012H03Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-444H3.1	RP23-444H3.1
Mus musculus	RefSeq	ILMN_201189	ILMN_201189	LOC384915	XM_357938.1	XM_357938.1			38089719	XM_357938.1	LOC384915		ILMN_1220356	005560088	S	140	CTGCCTCAACAGGCACAGGGACAAAGCTCTCAAGTGAGATTGAACACCTC										
Mus musculus	RefSeq	ILMN_259841	ILMN_259841	GM71	NM_001033236.2	NM_001033236.2		207965	98986328	NM_001033236.2	Gm71	NP_001028408.2	ILMN_2892215	004830370	S	286	GGGCTCATGGCTGCGACCCTCGGGGCAGATGTTATAGTCACTGATCTTGA	12	-	70683590-70683617:70683708-70683729	12qC2	Mus musculus gene model 71, (NCBI) (Gm71), mRNA.					
Mus musculus	RefSeq	ILMN_230378	ILMN_230378	CHRNA7	NM_007390.2	NM_007390.2		11441	31982868	NM_007390.2	Chrna7	NP_031416.2	ILMN_3001588	003520022	S	1727	CTTACACCCATCACCGGCATATCATTGTACTCGGGAGGGGCACCATGTGG	7	-	70243884-70243933	7qC	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 7 (Chrna7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; Any process that modulates the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 32225] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; The type of sexual cycle seen in female mammals, with physiologic changes in the endometrium that recur at regular intervals during the reproductive years [goid 42698] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IGI]; Any process that activates, maintains or increases the frequency, rate or extent of heart contraction as a result of the baroreceptor response to decreased blood pressure [goid 1988] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine [goid 14061] [evidence IMP]; A change in the behavior of an organism as a result of an ethanol stimulus [goid 48149] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat [goid 32094] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISO]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence ISO]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 beta production [goid 32691] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [evidence IMP]; The process which controls the timing of the type of sexual cycle seen in female mammals [goid 60112] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence ISO]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IDA];  [goid 4889] [evidence ISO];  [goid 4889] [evidence IMP]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]	alpha7; Acra7	alpha7; Acra7
Mus musculus	RefSeq	ILMN_198797	ILMN_242557	EG233445	XM_913264.3	XM_913264.3		233445	149257419	XM_913264.3	EG233445	XP_918357.3	ILMN_1216529	006520743	S	2403	GGCTGTCGTAGAAGTTTTCTGTATCTTGGCCTCCAGTGCAGGGCTGCTCC				7qD3	PREDICTED: Mus musculus predicted gene, EG233445 (EG233445), mRNA.					
Mus musculus	Riken	ILMN_204854	ILMN_204854	IRF6	ri|A130064P06|PX00124E22|AK037932|2185					AK037932	Irf6		ILMN_2568121	003360204	S	1657	CTAGTAGCATGACTGACCACCAGCACACCCTATACTGCATGTTGTGGATC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IGI]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221447	ILMN_221447	EBF2	NM_010095.2	NM_010095.2		13592	31560602	NM_010095.2	Ebf2	NP_034225.1	ILMN_2883606	000940148	S	3972	TGGAAAAGCATGTATCTCACCTGACACTGTTTCTGAGATGAGCAGGGTGG	14	+	66383507-66383556	14qD1	Mus musculus early B-cell factor 2 (Ebf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	O/E-3; Mmot1; D14Ggc1e	O/E-3; Mmot1; D14Ggc1e
Mus musculus	Riken	ILMN_204255	ILMN_204255	B130002B06RIK	ri|B130002B06|PX00156J10|AK044798|1203					AK044798	B130002B06Rik		ILMN_1231100	004860551	S	1084	GGAGAGCCCCCACTCCTGTCAATGTTCTATACTCCAGACCCAAACTGTGG										
Mus musculus	RefSeq	ILMN_184424	ILMN_184424	WARS	NM_011710.2	NM_011710.2		22375	34328205	NM_011710.2	Wars	NP_035840.2	ILMN_1254157	002350397	S	1639	CAGCGTTCTCCCTCTGGGCGGGCTGCATGGAATGAGCCTCCACTCAGAGT	12	-	110098379-110098428	12qF1	Mus musculus tryptophanyl-tRNA synthetase (Wars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6436] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophanyl-tRNA(Trp) [goid 4830] [evidence IEA]	WRS	WRS
Mus musculus	RefSeq	ILMN_184424	ILMN_184424	WARS	NM_011710.2	NM_011710.2		22375	34328205	NM_011710.2	Wars	NP_035840.2	ILMN_2445477	003450735	S	151	CAACAGCATAGCTACTCAAGGGGAGCTCGTGAGGTCCCTCAAAGCTGGAA	12	-	110126596-110126645	12qF1	Mus musculus tryptophanyl-tRNA synthetase (Wars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6436] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophanyl-tRNA(Trp) [goid 4830] [evidence IEA]	WRS	WRS
Mus musculus	RefSeq	ILMN_184424	ILMN_184424	WARS	NM_011710.2	NM_011710.2		22375	34328205	NM_011710.2	Wars	NP_035840.2	ILMN_3156343	001470176	A	1413	TCATAGACGTCCTTCAGCCCCTGATCGCAGAGCACCAGGCCCGACGCAAG	12	-	110099540-110099589	12qF1	Mus musculus tryptophanyl-tRNA synthetase (Wars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6436] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophanyl-tRNA(Trp) [goid 4830] [evidence IEA]	WRS	WRS
Mus musculus	RefSeq	ILMN_184424	ILMN_184424	WARS	NM_011710.2	NM_011710.2		22375	34328205	NM_011710.2	Wars	NP_035840.2	ILMN_3077377	000650167	I	1141	GCAGGGTGCTCAGACCAAGATGAGTGCCAGTGACCCCAACTCCTCCATCT	12	-	110104257-110104306	12qF1	Mus musculus tryptophanyl-tRNA synthetase (Wars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6436] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophanyl-tRNA(Trp) [goid 4830] [evidence IEA]	WRS	WRS
Mus musculus	RefSeq	ILMN_200306	ILMN_200306	LOC386186	XM_359110.1	XM_359110.1			38081270	XM_359110.1	LOC386186		ILMN_2538301	004540576	S	409	TGGGGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAATACGGAATGGC										
Mus musculus	RefSeq	ILMN_218760	ILMN_231579	WBP7	NM_029274.2	NM_029274.2		75410	115495456	NM_029274.2	Wbp7	NP_083550.2	ILMN_2699833	001500056	S	7967	GTGAGCCCAACTGCTTCTCTCGTGTCATCCATGTGGAAGGCCAGAAACAC	7	-	31354314-31354363	7qB1	Mus musculus WW domain binding protein 7 (Wbp7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	Mll2; 2610014H22Rik; mKIAA0304	Mll2; 2610014H22Rik; mKIAA0304
Mus musculus	RefSeq	ILMN_214584	ILMN_214584	KLHDC8A	NM_144810.2	NM_144810.2		213417	31542064	NM_144810.2	Klhdc8a	NP_659059.1	ILMN_2649530	001430017	S	3717	TCAGTGAGGGGTGAGGGAAGCCCTTGATGTCTGTGTTAAAACGTGTGGTT	1	+	134134351-134134400	1qE4	Mus musculus kelch domain containing 8A (Klhdc8a), mRNA.				A630065K24Rik; MGC19056	A630065K24Rik; MGC19056
Mus musculus	RefSeq	ILMN_214584	ILMN_214584	KLHDC8A	NM_144810.2	NM_144810.2		213417	31542064	NM_144810.2	Klhdc8a	NP_659059.1	ILMN_2880714	004640427	S	4117	GGAGAGACCCCGACTCACCCCATCCCCTCAAAATCAGGACTACTGAAAGG	1	+	134134751-134134800	1qE4	Mus musculus kelch domain containing 8A (Klhdc8a), mRNA.				A630065K24Rik; MGC19056	A630065K24Rik; MGC19056
Mus musculus	RefSeq	ILMN_236767	ILMN_236767	NRP2	NM_001077406.1	NM_001077406.1		18187	116686137	NM_001077406.1	Nrp2	NP_001070874.1	ILMN_3136656	004610370	A	3008	TGCACCTGCCCCGAAGCCCTGTGTGCATGGAGTTCCAGTACCAAGCCATG	1	+	62829943-62829992	1qC2	Mus musculus neuropilin 2 (Nrp2), transcript variant 5, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 17154] [evidence IPI]	Np2; Np-2; Npn-2; Npn2; 1110048P06Rik	Np2; Np-2; Npn-2; Npn2; 1110048P06Rik
Mus musculus	RefSeq	ILMN_196428	ILMN_196428	4933413J09RIK	XM_354798.4	XM_354798.4		71106	94396734	XM_354798.4	4933413J09Rik	XP_354798.3	ILMN_1243893	001510689	S	358	TTGCGGCATCACAGTCCTGTAACACCAGAACTCCCAGGCAGAGATGGATG	14	+	27195764-27195813	14qA3	PREDICTED: Mus musculus RIKEN cDNA 4933413J09 gene (4933413J09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196428	ILMN_196428	4933413J09RIK	XM_354798.4	XM_354798.4		71106	94396734	XM_354798.4	4933413J09Rik	XP_354798.3	ILMN_1219436	003830292	S	3029	CCTCGGATTGAATACTGAGTGTTCATACCGCCACTCTAGGCAGAAGAGGC	14	+	27219590-27219639	14qA3	PREDICTED: Mus musculus RIKEN cDNA 4933413J09 gene (4933413J09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_230600	ILMN_230600	AKAP7	NM_018747.3	NM_018747.3		432442	75905474	NM_018747.3	Akap7	NP_061217.2	ILMN_2944413	000020201	S	1997	GCTGATTTCAACCTGATTTTGCCATAGCTCTCCACTGTTGTTATGCCTGG	10	-	24889972-24890021	10qA4	Mus musculus A kinase (PRKA) anchor protein 7 (Akap7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence ISA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISS]	Akap18; 6430401D08; AKAP15; AI662165; BB170514	Akap18; 6430401D08; AKAP15; AI662165; BB170514
Mus musculus	RefSeq	ILMN_255815	ILMN_255815	GM806	NM_001033400.1	NM_001033400.1		328250	85701902	NM_001033400.1	Gm806	NP_001028572.1	ILMN_2945374	000870463	S	2445	AGAGGCACTGGGAAATAAGCACAGGAACGAGGGGTGGGGAAGGGATTGGG	13	+	50487749-50487798	13qA5	Mus musculus gene model 806, (NCBI) (Gm806), mRNA.					
Mus musculus	Riken	ILMN_204458	ILMN_204458	MGEA5	ri|B130016G05|PX00157C10|AK044963|2499					AK044963	Mgea5		ILMN_1247942	002450468	S	2412	GGACAAATGTAGCGAACCCCCAGGAATGACACGGAATCTGCTCTGGCAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210596	ILMN_210596	PRDX6	NM_007453.2	NM_007453.2		11758	31560738	NM_007453.2	Prdx6	NP_031479.1	ILMN_2623951	006900411	S	2243	CCAGGGGCTCAGATTACAAATGTTACCATCATGCCCTATGCCATCAGCTT	1	-	163076830-163076879	1qH2.1	Mus musculus peroxiredoxin 6 (Prdx6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The assembly of a bleb, a cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32060] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IMP]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	ORF06; Prdx6-rs3; Brp-12; 9430088D19Rik; Aop2; Prdx5; Lvtw-4; CP-3; Ltw4; aiPLA2; Aop2-rs3; mKIAA0106; Ltw-4; KIAA0106; AA690119; 1-cysPrx; GPx	ORF06; Prdx6-rs3; Brp-12; 9430088D19Rik; Aop2; Prdx5; Lvtw-4; CP-3; Ltw4; aiPLA2; Aop2-rs3; mKIAA0106; Ltw-4; KIAA0106; AA690119; 1-cysPrx; GPx
Mus musculus	RefSeq	ILMN_214407	ILMN_214407	OLFR547	NM_147079.2	NM_147079.2		259083	110735423	NM_147079.2	Olfr547	NP_667290.2	ILMN_2647686	002900064	S	568	GCTTGCAATAGCATCCGAGTAAACATTTGGTATGGATTTTCTGTCCTAAT	7	+	109683830-109683879	7qE3	Mus musculus olfactory receptor 547 (Olfr547), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR31-4	MOR31-4
Mus musculus	Riken	ILMN_204893	ILMN_204893	A530019I06RIK	ri|A530019I06|PX00140K12|AK040715|982					AK040715	A530019I06Rik		ILMN_2568421	000380524	S	795	GCCCAGAAAAAAAGGAGACCTGGACATCAGTCAGAGGGATAGCTCCCTGG										
Mus musculus	RefSeq	ILMN_221352	ILMN_221352	FAM124B	NM_173425.2	NM_173425.2		241128	142345413	NM_173425.2	Fam124b	NP_775601.1	ILMN_2734376	004670437	S	2747	GCATGCCGAAAGGTTGTGTTGGCTGAGTTGCTAGACCAGGACTTGAGTTC	1	-	80195339-80195388	1qC4	Mus musculus family with sequence similarity 124, member B (Fam124b), mRNA.					
Mus musculus	RefSeq	ILMN_216611	ILMN_216611	PFN1	NM_011072.3	NM_011072.3		18643	141803120	NM_011072.3	Pfn1	NP_035202.1	ILMN_2673211	002450477	S	225	GCTACAAGGACTCGCCCTCCGTCTGGGCCGCCGTCCCCGGGAAGACCTTC	11	-	70467863-70467912	11qB3	Mus musculus profilin 1 (Pfn1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers [goid 42989] [evidence TAS]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pfn	Pfn
Mus musculus	RefSeq	ILMN_212274	ILMN_212274	RAB24	NM_009000.3	NM_009000.3		19336	145301620	NM_009000.3	Rab24	NP_033026.1	ILMN_2747912	002750598	S	363	CTGGGCAAGGAATACGTGGGCAAGACGAGCCTGGTGGAACGATACGTGCA				13qB1	Mus musculus RAB24, member RAS oncogene family (Rab24), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	6530406O07Rik	6530406O07Rik
Mus musculus	RefSeq	ILMN_212264	ILMN_212264	CTNNBL1	NM_025680.3	NM_025680.3		66642	141802102	NM_025680.3	Ctnnbl1	NP_079956.2	ILMN_1249568	006130300	S	1528	ATGCCGGGCTCTTCATCCTACAGCACATCTGTTACATCATGGCGGAGATC	2	+	157709936-157709985	2qH1	Mus musculus catenin, beta like 1 (Ctnnbl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	NAP; P14L; NYD-SP19; 5730471K09Rik; FLJ21108	NAP; P14L; NYD-SP19; 5730471K09Rik; FLJ21108
Mus musculus	MEEBO	ILMN_185558	ILMN_185558	SCL0001874.1_222	scl0001874.1_222	AK011747.2			26375059	AK011747.2	scl0001874.1_222		ILMN_2428042	006840632	S	5	GTTGTCCATCCAGGCTCTTCTAAAGTGATAACATAGGGTCCCTTGAGCAG										
Mus musculus	RefSeq	ILMN_187232	ILMN_187232	ZDHHC2	NM_178395.3	NM_178395.3		70546	142357536	NM_178395.3	Zdhhc2	NP_848482.1	ILMN_2442336	001090370	S	2385	TGCTGTTTAGAAATGTAGTTTAGGGTAAATTACGATAATGTGTTTGTTGA	8	+	41570083-41570132	8qA4	Mus musculus zinc finger, DHHC domain containing 2 (Zdhhc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IDA]	MGC156396; 6430583A19Rik; 5730415P04Rik	MGC156396; 6430583A19Rik; 5730415P04Rik
Mus musculus	Riken	ILMN_204696	ILMN_204696	A330078I11RIK	ri|A330078I11|PX00133K24|AK039652|3726					AK039652	A330078I11Rik		ILMN_1225356	001570519	S	3595	GCTCTTGCAGAAGACCAGGGTTCAGTTCCAGGCATTCACAGGGCGACACA										
Mus musculus	RefSeq	ILMN_200723	ILMN_200723	LOC386545	XM_359388.1	XM_359388.1			38085514	XM_359388.1	LOC386545		ILMN_1227570	000070039	S	181	CTGTGTGACACTGCTATGGGCTCCATTTTCCTCAGTTGCCTGGCCGTTTG										
Mus musculus	RefSeq	ILMN_215651	ILMN_215651	RSHL3	XM_137041.6	XM_137041.6		212892	94388026	XM_137041.6	Rshl3	XP_137041.4	ILMN_1241366	000540255	S	3377	CTGTGTATAAATACTGTGCATGTGCACGCATTCTCTTTCCTGGGTGAGTG	10	+	33635599-33635648	10qB1	PREDICTED: Mus musculus radial spokehead-like 3 (Rshl3), mRNA.					
Mus musculus	RefSeq	ILMN_258944	ILMN_258944	AMD2	NM_007444.2	NM_007444.2		11703	8567327	NM_007444.2	Amd2	NP_031470.2	ILMN_2992239	004830768	S	367	CAAGGGTACCCACACCGGAATTTCCAGGAAGAAATCGAGTTTCTTAATGT	10	-	40012980-40013029	10qB1	Mus musculus S-adenosylmethionine decarboxylase 2 (Amd2), mRNA.		The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane [goid 8295] [evidence IEA]; The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 6597] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt + CO2 [goid 4014] [evidence IDA]	Amd1; Amd3	Amd1; Amd3
Mus musculus	RefSeq	ILMN_233560	ILMN_233560	USP22	NM_001004143.2	NM_001004143.2		216825	110625684	NM_001004143.2	Usp22	NP_001004143.2	ILMN_2990220	005910112	S	3975	TCTCACCACAGGGCTGCATTGCCTACCCCTCTCTTCCATACACTGCTGGC				11qB2	Mus musculus ubiquitin specific peptidase 22 (Usp22), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IC ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]	KIAA1063; AI427806; MGC91200; mKIAA1063; 9330200A01	KIAA1063; AI427806; MGC91200; mKIAA1063; 9330200A01
Mus musculus	RefSeq	ILMN_219941	ILMN_219941	IRGQ	NM_153134.2	NM_153134.2		210146	34328371	NM_153134.2	Irgq	NP_694774.2	ILMN_1255832	000780463	S	5875	CTGGAATTGCAGCTACACAATCTTGGCATTGCCCTTGAAAGACGAGCAGG	7	+	25323411-25323460	7qA3	Mus musculus immunity-related GTPase family, Q (Irgq), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FKSG27; AF322649; Irgq1	FKSG27; AF322649; Irgq1
Mus musculus	RefSeq	ILMN_219941	ILMN_219941	IRGQ	NM_153134.2	NM_153134.2		210146	34328371	NM_153134.2	Irgq	NP_694774.2	ILMN_1220700	003870164	S	2103	CAGTCACCCGATTTCCTAGGTACTGAATGGGAGTAGGGTCTATGCGCCAG	7	+	25319639-25319688	7qA3	Mus musculus immunity-related GTPase family, Q (Irgq), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FKSG27; AF322649; Irgq1	FKSG27; AF322649; Irgq1
Mus musculus	RefSeq	ILMN_219941	ILMN_219941	IRGQ	NM_153134.2	NM_153134.2		210146	34328371	NM_153134.2	Irgq	NP_694774.2	ILMN_2756157	001010170	S	2117	CTAGGTACTGAATGGGAGTAGGGTCTATGCGCCAGAAGTGTGTCATCCAG	7	+	25319653-25319702	7qA3	Mus musculus immunity-related GTPase family, Q (Irgq), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FKSG27; AF322649; Irgq1	FKSG27; AF322649; Irgq1
Mus musculus	RefSeq	ILMN_219941	ILMN_219941	IRGQ	NM_153134.2	NM_153134.2		210146	34328371	NM_153134.2	Irgq	NP_694774.2	ILMN_2715466	003710360	S	1863	ACAGGTGGGCTGGGTTACCGTGCTGCGCACGGTGTACTTCTACAAGCCTT	7	+	25319399-25319448	7qA3	Mus musculus immunity-related GTPase family, Q (Irgq), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FKSG27; AF322649; Irgq1	FKSG27; AF322649; Irgq1
Mus musculus	RefSeq	ILMN_217755	ILMN_217755	GALM	NM_176963.4	NM_176963.4		319625	146198545	NM_176963.4	Galm	NP_795937.1	ILMN_2687156	005720022	S	1562	TTTGACAGAACTCTGTTTTCCTGCCTCCTCTTTGACCTCAGACTACCCCC				17qE3	Mus musculus galactose mutarotase (Galm), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence ISO]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [evidence IEA]; Catalysis of the reaction: alpha-D-glucose = beta-D-glucose. Also acts on L-arabinose, D-xylose, D-galactose, maltose and lactose [goid 4034] [evidence ISO]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]	A530057M15Rik; AU020959; AU015645	A530057M15Rik; AU020959; AU015645
Mus musculus	RefSeq	ILMN_212642	ILMN_212642	HTR1B	NM_010482.1	NM_010482.1		15551	6754257	NM_010482.1	Htr1b	NP_034612.1	ILMN_2628759	002260274	S	987	CTCCCTGGTGATGCCTATCTGTAAGGATGCCTGCTGGTTTCACATGGCCA	9	-	81525123-81525172	9qE1	Mus musculus 5-hydroxytryptamine (serotonin) receptor 1B (Htr1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence IDA]		
Mus musculus	RefSeq	ILMN_191308	ILMN_237308	SMC2	NM_008017.3	NM_008017.3		14211	62990165	NM_008017.3	Smc2	NP_032043.3	ILMN_2689642	002120768	S	3662	GTCAAGCTGGGAAGATTCCGAAGGAAGCAAAGTCCAGAGGAAAAGAACCC	4	+	52499472-52499521	4qB2	Mus musculus structural maintenance of chromosomes 2 (Smc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW545314; CAPE; Fin16; 5730502P04Rik; Smc2l1; CAP-E; AI255214	AW545314; CAPE; Fin16; 5730502P04Rik; Smc2l1; CAP-E; AI255214
Mus musculus	RefSeq	ILMN_223316	ILMN_239381	NG23	NM_023893.3	NM_023893.3		78376	145386504	NM_023893.3	Ng23	NP_076382.2	ILMN_1234510	004010102	S	485	CCCTTACTCACCAGTGCAGGGAGGGGAGGGTCTCCTGTCTACACAAGGGT				17qB1	Mus musculus Ng23 protein (Ng23), mRNA. XM_903952 XM_912027 XM_922244 XM_922249	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	G7d; 2810436B06Rik	G7d; 2810436B06Rik
Mus musculus	RefSeq	ILMN_219631	ILMN_239381	NG23	NM_023893.3	NM_023893.3		78376	145386504	NM_023893.3	Ng23	NP_076382.2	ILMN_1239632	003460326	S	288	GACTGATGCCCCTCTGCTAACCCGGATTCAAAAGGTGAATGCTTGTCTGC				17qB1	Mus musculus Ng23 protein (Ng23), mRNA. XM_903952 XM_912027 XM_922244 XM_922249	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	G7d; 2810436B06Rik	G7d; 2810436B06Rik
Mus musculus	RefSeq	ILMN_201414	ILMN_201414	LOC385123	XM_358071.1	XM_358071.1			38093579	XM_358071.1	LOC385123		ILMN_1241222	006550682	S	425	GCTTTAGAGCATTTGCAGCTTCCTCGTCTGAGCTGCTGCCCTTGTATCCT										
Mus musculus	MEEBO	ILMN_218241	ILMN_218241	SCAMP3	scl22983.9.9_77	NM_011886.1			6755403	NM_011886.1	Scamp3		ILMN_1245139	005810564	S	1097	GTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]			
Mus musculus	RefSeq	ILMN_221686	ILMN_221686	TMEM206	NM_025864.3	NM_025864.3		66950	141802089	NM_025864.3	Tmem206	NP_080140.1	ILMN_1218588	002000364	S	3158	CCCTGGACCACAAGCAACCTAATTCTAATTAGAGTACATCCGTAAGTTAT	1	+	193175758-193175807	1qH6	Mus musculus transmembrane protein 206 (Tmem206), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI118576	AI118576
Mus musculus	RefSeq	ILMN_237156	ILMN_237156	NFATC2	NM_001037177.1	NM_001037177.1		18019	81295420	NM_001037177.1	Nfatc2	NP_001032254.1	ILMN_3012227	004610241	I	1	TTGAGCAGGAAGCTCGCGCCGCCACCCGCTCCCCGGACGCGTCCAGGACC	2	-	168415798-168415847	2qH3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 (Nfatc2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISO]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	NFAT1-D; NFAT1; AI607462; Nfatp	NFAT1-D; NFAT1; AI607462; Nfatp
Mus musculus	RefSeq	ILMN_237156	ILMN_237156	NFATC2	NM_001037177.1	NM_001037177.1		18019	81295420	NM_001037177.1	Nfatc2	NP_001032254.1	ILMN_3082773	005290255	A	1950	TGATCCTCACGGGCCAGAACTTCACAGCGGAGTCCAAGGTTGTGTTCATG	2	-	168348750-168348799	2qH3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 (Nfatc2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISO]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	NFAT1-D; NFAT1; AI607462; Nfatp	NFAT1-D; NFAT1; AI607462; Nfatp
Mus musculus	RefSeq	ILMN_216585	ILMN_216585	ADAM8	NM_007403.2	NM_007403.2		11501	118131182	NM_007403.2	Adam8	NP_031429.1	ILMN_1224005	007200037	S	2374	TCAAGCCAACCTTTGCACCCCCGACACCACCAGTCAAGCCCGGGACTGGA	7	-	147165882-147165931	7qF4	Mus musculus a disintegrin and metallopeptidase domain 8 (Adam8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	E430039A18Rik; MS2; CD156; CD156a	E430039A18Rik; MS2; CD156; CD156a
Mus musculus	RefSeq	ILMN_216585	ILMN_216585	ADAM8	NM_007403.2	NM_007403.2		11501	118131182	NM_007403.2	Adam8	NP_031429.1	ILMN_2756613	002680131	S	2396	GACACCACCAGTCAAGCCCGGGACTGGAGGGACGGTGCCTGGAGCAACTC	7	-	147165860-147165909	7qF4	Mus musculus a disintegrin and metallopeptidase domain 8 (Adam8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	E430039A18Rik; MS2; CD156; CD156a	E430039A18Rik; MS2; CD156; CD156a
Mus musculus	RefSeq	ILMN_217208	ILMN_217208	ISCA1	NM_026921.4	NM_026921.4		69046	146141199	NM_026921.4	Isca1	NP_081197.1	ILMN_2680329	001170603	S	1718	GTGGAAGGCTGAGTCTCATGCAGCTGAGTTTAATATTTGTGCTATTTACT				13qB2	Mus musculus iron-sulfur cluster assembly 1 homolog (S. cerevisiae) (Isca1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	1810010A06Rik; Hbld2	1810010A06Rik; Hbld2
Mus musculus	RefSeq	ILMN_212352	ILMN_212352	ANKRD1	NM_013468.2	NM_013468.2		107765	31560505	NM_013468.2	Ankrd1	NP_038496.2	ILMN_2950286	000150544	S	1575	GATGTCGATGTCCCAAGGTGAAGGCAACGTCAGGAGTGCCGCATGTAGGG	19	-	36177249-36177298	19qC2	Mus musculus ankyrin repeat domain 1 (cardiac muscle) (Ankrd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	Crap; CARP; Alrp	Crap; CARP; Alrp
Mus musculus	RefSeq	ILMN_199002	ILMN_229262	GM62	XM_907633.2	XM_907633.2		215919	94388146	XM_907633.2	Gm62	XP_912726.1	ILMN_1239629	004390563	S	496	GTCTGCCACTGGGAAGTTGATGTGGAGAAAAGGAACGAATGGGCTCCAGG					PREDICTED: Mus musculus gene model 62, (NCBI) (Gm62), mRNA.					
Mus musculus	MEEBO	ILMN_191181	ILMN_191181	2810407C02RIK	scl23162.1_20				51708095	XM_283848	2810407C02Rik		ILMN_1230908	003360315	S	20	CCTTCCGGGCGCAGCCCCCGGCCCTCGGCTCTCTCTGGAGTGCTGCCGTG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_197079	ILMN_197079	LOC192690	XM_110818.4	XM_110818.4			38073897	XM_110818.4	LOC192690		ILMN_1228461	007050259	S	845	CATCAAGTCTGGGTTAAAAGAGAATGCCTCCACTGCCTTTTCAAGCCCCC										
Mus musculus	RefSeq	ILMN_193993	ILMN_231098	SAMSN1	NM_023380.2	NM_023380.2		67742	85677483	NM_023380.2	Samsn1	NP_075869.2	ILMN_2646322	006020400	S	1196	CTGAACACACACTCTCATGTCCACACCCGCAGCCGAATTCCATTTGAACT	16	-	75859638-75859684:75859685-75859687	16qC3.1	Mus musculus SAM domain, SH3 domain and nuclear localization signals, 1 (Samsn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]		Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence ISO]	Hacs1; 4930571B16Rik; 930571B16Rik	Hacs1; 4930571B16Rik; 930571B16Rik
Mus musculus	RefSeq	ILMN_193993	ILMN_231098	SAMSN1	NM_023380.2	NM_023380.2		67742	85677483	NM_023380.2	Samsn1	NP_075869.2	ILMN_2502346	002030543	S	1580	CTCATTTTTGAAGTACTGGGAAGTTGGGGACTGAGATTAGAGACTTGTTT	16	-	75859254-75859303	16qC3.1	Mus musculus SAM domain, SH3 domain and nuclear localization signals, 1 (Samsn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]		Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence ISO]	Hacs1; 4930571B16Rik; 930571B16Rik	Hacs1; 4930571B16Rik; 930571B16Rik
Mus musculus	RefSeq	ILMN_201366	ILMN_201366	LOC382553	XM_356565.1	XM_356565.1			38092640	XM_356565.1	LOC382553		ILMN_2542043	006180402	S	663	GGCAGAGCCTCCAATAGGGAACTTGAGAGCAGCTTTGCTGGCCTTGGATC										
Mus musculus	Riken	ILMN_206518	ILMN_206518	MYOZ2	ri|D830030K03|PX00199J17|AK085927|2412					AK085927	Myoz2		ILMN_1257860	006940373	S	2106	CCCCAAAGGTGTCACAGCCCACAGGTCAAGAACCACGGGTATGTGGGATT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IPI]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196925	ILMN_196925	LOC227264	XM_136694.2	XM_136694.2			38049616	XM_136694.2	LOC227264		ILMN_1253448	004890612	S	380	CCAAATCAGAGGCCGCAGCTTCAACTAAGGTTCAGGCGTCAGCTCCAGCC										
Mus musculus	RefSeq	ILMN_247400	ILMN_247400	GOLGA7	NM_001042484.1	NM_001042484.1		57437	109809746	NM_001042484.1	Golga7	NP_001035949.1	ILMN_3157764	004200731	A	92	GCAGCAGGCACCGGTGTCCGGGAAGGTGTTCATTCAGCGAGACTACAGCA	8	-	24367198-24367247	8qA2	Mus musculus golgi autoantigen, golgin subfamily a, 7 (Golga7), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence ISO]	The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis [goid 6893] [evidence ISO]		C130038N16Rik; AB041568; MGC30271; R75586; GOLGA3AP1; GCP16; MGC102434; MGC118465; HSPC041	C130038N16Rik; AB041568; MGC30271; R75586; GOLGA3AP1; GCP16; MGC102434; MGC118465; HSPC041
Mus musculus	RefSeq	ILMN_199778	ILMN_199778	LOC383001	XM_356793.1	XM_356793.1			38077218	XM_356793.1	LOC383001		ILMN_1220821	001710372	S	600	AGGAATCACAGAGACCCACGTTGCAAAGGTTGAGTCTACGCCTGGAGCTC										
Mus musculus	RefSeq	ILMN_192883	ILMN_192883	V1RB4	NM_053227.2	NM_053227.2		113854	117553591	NM_053227.2	V1rb4	NP_444457.2	ILMN_2492216	000940240	S	440	GCAGTCACTTTTTAGTATCAATGACTGTGACCCCCAATTTGACCTCAGAG	6	+	89843707-89843756	6qD1	Mus musculus vomeronasal 1 receptor, B4 (V1rb4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]	V1rb11; V1RA10	V1rb11; V1RA10
Mus musculus	RefSeq	ILMN_212834	ILMN_233460	OLFR26	NM_146783.1	NM_146783.1		18324	49170057	NM_146783.1	Olfr26	NP_666994.1	ILMN_2630858	006330243	S	588	GCTTCTCCTATTTATTATTGGAGGGTTCAACACCTTGGTGCCTACTCTAG	9	+	38663236-38663285	9qA5.1	Mus musculus olfactory receptor 26 (Olfr26), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MTPCR09; MOR171-9; MGC161287	MTPCR09; MOR171-9; MGC161287
Mus musculus	RefSeq	ILMN_211659	ILMN_229062	PTPLA	NM_001012396.2	NM_001012396.2		30963	145279180	NM_001012396.2	Ptpla	NP_001012396.2	ILMN_2734712	003930156	S	462	GCTTGTGACTGGGGTCCAAGTGAGCTCAAGAATCTTCATGGTGTGGCTCA				2qA1	Mus musculus protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a (Ptpla), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_211659	ILMN_229062	PTPLA	NM_001012396.2	NM_001012396.2		30963	145279180	NM_001012396.2	Ptpla	NP_001012396.2	ILMN_1236185	004390162	S	806	CACAAGGTGCTCTTTTCAGAAAAACCGGATTACTTGAGTCCAAGTTTTAA				2qA1	Mus musculus protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a (Ptpla), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_188934	ILMN_257611	5830409B07RIK	XM_985015.1	XM_985015.1		76020	94372419	XM_985015.1	5830409B07Rik	XP_990109.1	ILMN_1238405	007200180	S	1123	CCTCCCTTCCGGTTTTTGGGGTGTTTGTAGCATATCATTGCAACCATCAT					PREDICTED: Mus musculus RIKEN cDNA 5830409B07 gene (5830409B07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217292	ILMN_312692	LOC100047151	XM_001476956.1	XM_001476956.1		100047151	149257949	XM_001476956.1	LOC100047151	XP_001477006.1	ILMN_2681528	003840445	S	396	AATGAAAAGTCATATATTAAACAACCTTAATAAATATTCTGTGAGCAGAA					PREDICTED: Mus musculus similar to mitochondrial ribosomal protein S36 (LOC100047151), mRNA.					
Mus musculus	RefSeq	ILMN_214919	ILMN_214919	EFEMP1	NM_146015.1	NM_146015.1		216616	22122482	NM_146015.1	Efemp1	NP_666127.1	ILMN_2653462	005670435	S	1361	GTGGGCATTTAATCCATAAGAGTCAATGTTTATCGTTATCACTGTGTGTA	11	+	28826447-28826496	11qA3.3	Mus musculus epidermal growth factor-containing fibulin-like extracellular matrix protein 1 (Efemp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC37612	MGC37612
Mus musculus	RefSeq	ILMN_197234	ILMN_197234	LOC380846	XM_358442.1	XM_358442.1			38074702	XM_358442.1	LOC380846		ILMN_2527396	004010382	S	677	GGCCTCAGGATTTGTACCATACTACAGGAGCCCCGAAGAGAGGCTACGGG										
Mus musculus	RefSeq	ILMN_221951	ILMN_221951	ZFP771	NM_177362.2	NM_177362.2		244216	31340763	NM_177362.2	Zfp771	NP_796336.1	ILMN_2848353	002850168	S	947	GCCTCTACATCTGCGCGGGCTGCGGCCGAGACTTCAAGCTACCCGCCAGT	7	+	127045666-127045715	7qF3	Mus musculus zinc finger protein 771 (Zfp771), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	G630024C07Rik	G630024C07Rik
Mus musculus	RefSeq	ILMN_221951	ILMN_221951	ZFP771	NM_177362.2	NM_177362.2		244216	31340763	NM_177362.2	Zfp771	NP_796336.1	ILMN_2848354	004210278	S	868	TACCCGTGCACGGAGTGCGGCCGGCGCTTCCGCCTCAGCTCACACTTCAT	7	+	127045587-127045636	7qF3	Mus musculus zinc finger protein 771 (Zfp771), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	G630024C07Rik	G630024C07Rik
Mus musculus	Riken	ILMN_207036	ILMN_207036	PPS	ri|6330445C20|PX00009L06|AK078104|1708					AK078104	Pps		ILMN_2584558	000130736	S	1395	GCAACAACCTGCACTCTGTAGTGGGGATAAGTCAACCCTTCAAGATCCCG										
Mus musculus	RefSeq	ILMN_201282	ILMN_257794	EG629689	XM_894604.1	XM_894604.1		629689	82932618	XM_894604.1	EG629689	XP_899697.1	ILMN_1227433	004810719	S	879	CATTCCAGAGACTCCCTCCAGTGGCAAAGCCTGGTTCGAATGGGATCTTG	10	+	52249204-52249253	10qB3	PREDICTED: Mus musculus predicted gene, EG629689 (EG629689), mRNA.					
Mus musculus	RefSeq	ILMN_251279	ILMN_251279	CCDC108	NM_001039495.1	NM_001039495.1		241116	87162475	NM_001039495.1	Ccdc108	NP_001034584.1	ILMN_3162084	004040070	S	5468	GAACATCCTGGTAGAGGCAAGCCGTGGAGAGGTAGTGCTCACTTCGAGGC	1	-	74948949-74948998	1qC3	Mus musculus coiled-coil domain containing 108 (Ccdc108), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	B230363K08Rik; A230051F10	B230363K08Rik; A230051F10
Mus musculus	RefSeq	ILMN_241953	ILMN_241953	AKAP14	NM_001033785.1	NM_001033785.1		434756	85702100	NM_001033785.1	Akap14	NP_001028957.1	ILMN_2780362	000520026	S	1632	GGCTGCGGGACATTACTGAGACCAAGCATATTTTGTTGGAGTCCATTCCC	X	-	33582253-33582302	XqA3.3	Mus musculus A kinase (PRKA) anchor protein 14 (Akap14), mRNA.					
Mus musculus	Riken	ILMN_202276	ILMN_202276	1700085C21RIK	ri|1700085C21|ZX00076K10|AK007004|1083					AK007004	1700085C21Rik		ILMN_1215197	000050021	S	691	CCAGAAATGTTGCGCACAAGCTGAAAGCCAGTGGAACGCAAGGGTGAGCC										
Mus musculus	RefSeq	ILMN_242965	ILMN_242965	4930524E20RIK	NM_001081661.1	NM_001081661.1		75097	126157501	NM_001081661.1	4930524E20Rik	NP_001075130.1	ILMN_3009928	005690709	S	103	GTCCTCCAGGCATCACAGCATTCCAGCAACCTAAGCGGATTCTTTAGCTC	X	+	112021293-112021342	XqE1	Mus musculus RIKEN cDNA 4930524E20 gene (4930524E20Rik), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Mus musculus	Riken	ILMN_205473	ILMN_205473	A830035A12RIK	ri|A830035A12|PX00155E04|AK043804|862					AK043804	A830035A12Rik		ILMN_1255466	004560240	S	394	CCTGTCATTACTTTCTACGCCATCTTGGATCCGCTTGTCAACGTCCCACA										
Mus musculus	RefSeq	ILMN_211309	ILMN_235057	0610025P10RIK	NM_001013414.1	NM_001013414.1		216860	61740636	NM_001013414.1	0610025P10Rik	NP_001013432.1	ILMN_1226653	006270482	S	4935	GCACTGACTTGGGGAACATGACTCCCTATTATTACCCTCCCCCATATCAC	11	+	69721413-69721462	11qB3	Mus musculus RIKEN cDNA 0610025P10 gene (0610025P10Rik), mRNA.				BC023037; RP23-172M21.17; KIAA1787	BC023037; RP23-172M21.17; KIAA1787
Mus musculus	RefSeq	ILMN_214448	ILMN_214448	1110033F04RIK	NM_026807.2	NM_026807.2		68673	114687894	NM_026807.2	1110033F04Rik	NP_081083.2	ILMN_2648134	000060274	S	863	TCCCCATGACATTAAAATCCACTAATTGTCTTTTATAGCTTTTGCAAAGA	11	-	99495486-99495535	11qD	Mus musculus RIKEN cDNA 1110033F04 gene (1110033F04Rik), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI604442	AI604442
Mus musculus	RefSeq	ILMN_210069	ILMN_210069	LDB1	NM_010697.1	NM_010697.1		16825	6754519	NM_010697.1	Ldb1	NP_034827.1	ILMN_2601907	004640452	S	2196	GTCAACAGAGGGTAAAATTCTGGGCTCCTCCCTTTTGCCACTTACCCAGC	19	-	46109329-46109378	19qC3	Mus musculus LIM domain binding 1 (Ldb1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IPI]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte differentiation [goid 45647] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [pmid 8876198] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IEA]; Interacting selectively with a LIM domain (for Lin-11 Isl-1 Mec-3) of a protein, a domain with seven conserved cysteine residues and a histidine, that binds two zinc ions and acts as an interface for protein-protein interactions [goid 30274] [evidence IDA]; Interacting selectively with a LIM domain (for Lin-11 Isl-1 Mec-3) of a protein, a domain with seven conserved cysteine residues and a histidine, that binds two zinc ions and acts as an interface for protein-protein interactions [goid 30274] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	CLIM2; NLI	CLIM2; NLI
Mus musculus	RefSeq	ILMN_201157	ILMN_201157	LOC384875	XM_357911.1	XM_357911.1			38089525	XM_357911.1	LOC384875		ILMN_1247544	003120768	S	143	CCTCGGCAGCCGCCTATAAGCAGACCTTTTGTCTGGAGGTTTGGAGAGAG										
Mus musculus	RefSeq	ILMN_225085	ILMN_225085	MED22	NM_011513.2	NM_011513.2		20933	76781477	NM_011513.2	Med22	NP_035643.1	ILMN_3041056	000450066	I	2544	CATGGCCTGTTGACACCACCTTTCTTTGGATGCAAGAGTGGCCAGAACCG	2	-	26761659-26761708	2qA3	Mus musculus mediator complex subunit 22 (Med22), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AW212655; AW558812; Surf5; Surf-5	AW212655; AW558812; Surf5; Surf-5
Mus musculus	RefSeq	ILMN_210361	ILMN_210361	AI118078	NM_172923.3	NM_172923.3		244886	146198553	NM_172923.3	AI118078	NP_766511.1	ILMN_2604835	004290605	S	2248	ACCCGAGCCTGTCTCACCTGCCATTCTCTCATTCCAGCATGGACATTTCC				9qB	Mus musculus expressed sequence AI118078 (AI118078), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	9630029F15	9630029F15
Mus musculus	RefSeq	ILMN_218974	ILMN_218974	RILPL1	NM_021430.2	NM_021430.2		75695	31981150	NM_021430.2	Rilpl1	NP_067405.1	ILMN_2702628	005700333	S	1658	CAGCTCTAGGTGGCGGCCGCCTCAACATCAGTTCCTCAAACGAACTGTCT	5	-	124943630-124943679	5qF	Mus musculus Rab interacting lysosomal protein-like 1 (Rilpl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			FLJ39378; 6330559I19Rik	FLJ39378; 6330559I19Rik
Mus musculus	RefSeq	ILMN_218974	ILMN_218974	RILPL1	NM_021430.2	NM_021430.2		75695	31981150	NM_021430.2	Rilpl1	NP_067405.1	ILMN_2848163	000450092	S	1930	TCTTACGGCCTTTGTCGGTGAGGAGCAGAGGAAGGGAGTTTTATATCATG	5	-	124943358-124943407	5qF	Mus musculus Rab interacting lysosomal protein-like 1 (Rilpl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			FLJ39378; 6330559I19Rik	FLJ39378; 6330559I19Rik
Mus musculus	RefSeq	ILMN_210894	ILMN_210894	CCDC113	NM_172914.2	NM_172914.2		244608	141801871	NM_172914.2	Ccdc113	NP_766502.1	ILMN_2610277	006840647	S	1208	CAGGAGCAGCCGGCAGCTTATAGACCAAGAAGTGACCCATTAAAGTTCTC	8	+	98082725-98082774	8qD1	Mus musculus coiled-coil domain containing 113 (Ccdc113), mRNA.				BC060957; 4933409I22	BC060957; 4933409I22
Mus musculus	MEEBO	ILMN_214820	ILMN_214820	4933402J10RIK	scl26575.3.1_37	XM_149613.1			20830980	XM_149613.1	4933402J10Rik		ILMN_2652312	003190017	S	887	AGTCTGATGAAAGCTTGTTCTGGAAAACCTTCAAAATCAGGAAATAAAGC										
Mus musculus	RefSeq	ILMN_218396	ILMN_218396	FBXO9	NM_023605.2	NM_023605.2		71538	125628672	NM_023605.2	Fbxo9	NP_076094.2	ILMN_2695306	002140411	S	1656	CTCGGAAAGGCCTCTGTAGAGCCACACCAGCATGTCACTGCTGCATGAGC	9	-	77929754-77929786:77929787-77929803	9qE1	Mus musculus f-box protein 9 (Fbxo9), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		9030401P18Rik; AA986398	9030401P18Rik; AA986398
Mus musculus	RefSeq	ILMN_218396	ILMN_218396	FBXO9	NM_023605.2	NM_023605.2		71538	125628672	NM_023605.2	Fbxo9	NP_076094.2	ILMN_1259436	006020288	S	188	AAAATGGCTGCCGTACGCCGGGCCCGCAGTTATTGCCGCTGCCTGGTGCG	9	-	77956226-77956275	9qE1	Mus musculus f-box protein 9 (Fbxo9), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		9030401P18Rik; AA986398	9030401P18Rik; AA986398
Mus musculus	Riken	ILMN_205897	ILMN_205897	G2AN	ri|A830012A04|PX00153G22|AK043606|1226					AK043606	G2an		ILMN_1231453	002630072	S	862	CTAGGCGGGCTGACCAGTGATCCACAGCATCCACCTGACTTCTCTGATAC										
Mus musculus	RefSeq	ILMN_210862	ILMN_210862	AGER	NM_007425.2	NM_007425.2		11596	110225340	NM_007425.2	Ager	NP_031451.2	ILMN_1224092	005050735	S	1204	AAGCGGAGATGCCAGAGAATGGTGCCGGGGGACCGTAAGAGCACCCAGAT	17	+	34736150-34736199	17qB1	Mus musculus advanced glycosylation end product-specific receptor (Ager), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RAGE	RAGE
Mus musculus	RefSeq	ILMN_210862	ILMN_210862	AGER	NM_007425.2	NM_007425.2		11596	110225340	NM_007425.2	Ager	NP_031451.2	ILMN_1239451	000070674	S	940	ACCCTAGCCACGGACCTCAGGAAAGCCCTCCTGTCAGCATCAGGGTCACA	17	+	34735883-34735929:34735857-34735859	17qB1	Mus musculus advanced glycosylation end product-specific receptor (Ager), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RAGE	RAGE
Mus musculus	MEEBO	ILMN_186118	ILMN_186118	9626965_214_RC	9626965_214_rc						9626965_214_rc		ILMN_2432763	001570307	S	3	GGTCGGGGACCCAGATTGGTGTTTCGGCATCCTGTGGAAAAACACAAGCA										
Mus musculus	MEEBO	ILMN_212716	ILMN_212716	MLPH	scl17662.18.1_18	NM_053015.1			18543178	NM_053015.1	Mlph		ILMN_2629498	006520017	S	3862	TTCTCATTACATGTAAATTACCTTTCCAGCATAATAGACTTCCTTTTTTA						A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IMP]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IMP]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IMP]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with the plus end of a microtubule [goid 51010] [evidence IPI]; Interacting selectively with a class V myosin; myosin V is a dimeric molecule involved in intracellular transport [goid 31489] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IDA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IDA]		
Mus musculus	RefSeq	ILMN_198208	ILMN_225448	GM941	XM_916695.2	XM_916695.2		381112	94403161	XM_916695.2	Gm941	XP_921788.1	ILMN_1241803	002070348	S	2278	ATCCCAGGCAAGACCAGAAAGGGGGCTTTCGCAGCTCATTCCGCAAGCTC					PREDICTED: Mus musculus gene model 941, (NCBI) (Gm941), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211914	ILMN_211914	TXLNB	NM_138628.3	NM_138628.3		378431	148277079	NM_138628.3	Txlnb	NP_619534.2	ILMN_1212953	003130300	S	2412	GCTGTTTGCAATTTATAACTAATATGGAAATTCTCTGTGATTTGGCAGCC				10qA2	Mus musculus taxilin beta (Txlnb), mRNA.				Mdp77; 2310001N14Rik	Mdp77; 2310001N14Rik
Mus musculus	RefSeq	ILMN_199250	ILMN_199250	LOC272681	XM_195399.2	XM_195399.2			38093466	XM_195399.2	LOC272681		ILMN_2534572	007610278	S	318	CGGAGACATTGTCACAGTTGGAGAGTGCAGGCCCCTGAGAAAGACTGTGT										
Mus musculus	RefSeq	ILMN_190999	ILMN_250574	TMC1	NM_028953.2	NM_028953.2		13409	119703759	NM_028953.2	Tmc1	NP_083229.1	ILMN_1220336	004570671	S	3454	GACTGAACGGTAGCACTCAGCGCCCTCCTCGTCTTGTGCTGTGAACTTAG	19	-	20858517-20858566	19qB	Mus musculus transmembrane channel-like gene family 1 (Tmc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]		4933416G09Rik; Bth; Beethoven; CWEA1; dn	4933416G09Rik; Bth; Beethoven; CWEA1; dn
Mus musculus	RefSeq	ILMN_250574	ILMN_250574	TMC1	NM_028953.2	NM_028953.2		13409	119703759	NM_028953.2	Tmc1	NP_083229.1	ILMN_2784402	000070053	S	3677	CCTTGTCCAGATTGGCAACTAGTCCCAGTCACTCTCCTAACCGCATTCCT	19	-	20858294-20858343	19qB	Mus musculus transmembrane channel-like gene family 1 (Tmc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]		4933416G09Rik; Bth; Beethoven; CWEA1; dn	4933416G09Rik; Bth; Beethoven; CWEA1; dn
Mus musculus	RefSeq	ILMN_213312	ILMN_213312	RAD9	NM_011237.2	NM_011237.2		19367	133892125	NM_011237.2	Rad9	NP_035367.1	ILMN_2670507	003130048	S	133	GCTGTCCATTCGCTATCCCGAATCGGGGACGAGCTCTATCTGGAACCCTT	19	-	4201338-4201387	19qA	Mus musculus RAD9 homolog (S. pombe) (Rad9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [evidence IGI]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_213312	ILMN_213312	RAD9	NM_011237.2	NM_011237.2		19367	133892125	NM_011237.2	Rad9	NP_035367.1	ILMN_1237627	006620086	S	1067	TCCCACCTGTCTCCCTGGCCTCCCATGACCTTGCCCCCACCTCAGAGGAG	19	-	4196225-4196274	19qA	Mus musculus RAD9 homolog (S. pombe) (Rad9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [evidence IGI]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221794	ILMN_310041	LOC100043391	XM_001479903.1	XM_001479903.1		100043391	149249990	XM_001479903.1	LOC100043391	XP_001479953.1	ILMN_2740432	001400088	S	437	GCCAGGTCATCATGTCCATCCGAACCAAGTTGCAGAACAAGGAACATGTG	2	-	105394558-105394607	2qE3	PREDICTED: Mus musculus similar to QM protein (LOC100043391), mRNA.					
Mus musculus	RefSeq	ILMN_196874	ILMN_240574	EG632802	XM_978542.1	XM_978542.1		632802	94362800	XM_978542.1	EG632802	XP_983636.1	ILMN_1242238	004480278	S	565	AGACCAGCCTTTATTAGCTGCTTGGTACCTTCCAAGAGGTTTGGACCTCC	1	+	21262974-21262990:21262991-21263023	1qA4	PREDICTED: Mus musculus predicted gene, EG632802 (EG632802), mRNA.					
Mus musculus	RefSeq	ILMN_216299	ILMN_216299	FGD5	NM_172731.2	NM_172731.2		232237	56699429	NM_172731.2	Fgd5	NP_766319.2	ILMN_2741465	003710156	S	3967	GGCGCTGGAAGAAACTCTGGCTCGTCATCAAGGGCAAAGTACTCTACACC	6	+	92021370-92021419	6qD1	Mus musculus FYVE, RhoGEF and PH domain containing 5 (Fgd5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	mFLJ00274; C330025N11Rik; ZFYVE23; FLJ00274	mFLJ00274; C330025N11Rik; ZFYVE23; FLJ00274
Mus musculus	RefSeq	ILMN_220146	ILMN_220146	CHN2	NM_023543.1	NM_023543.1		69993	37574154	NM_023543.1	Chn2	NP_076032.1	ILMN_2718189	000240348	S	2333	CCCACACACTGACAAGTCTTGCTTAGAGTGCCCAGAAGAAAACTGCCCTG	6	+	54251485-54251534	6qB3	Mus musculus chimerin (chimaerin) 2 (Chn2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence ISO]	1700026N20Rik; Bch; ARHGAP3	1700026N20Rik; Bch; ARHGAP3
Mus musculus	RefSeq	ILMN_199683	ILMN_199683	LOC383811	XM_357271.1	XM_357271.1			38075993	XM_357271.1	LOC383811		ILMN_1212650	007100445	S	509	CAGGTAACGTAGCAAAGGCTTTAGTTTCCCAAAGAAGCTCCAGTCTACTG										
Mus musculus	RefSeq	ILMN_205432	ILMN_245449	FRY	XM_976343.2	XM_976343.2		320365	149254725	XM_976343.2	Fry	XP_981437.2	ILMN_1256291	002680386	S	11196	ACCCGGGGACTCGGAAGAAAAGCAACTGGAGCTGTGTCAGAGGCTGTACA				5qG3	PREDICTED: Mus musculus furry homolog (Drosophila) (Fry), mRNA.					
Mus musculus	RefSeq	ILMN_212150	ILMN_245449	FRY	XM_976343.2	XM_976343.2		320365	149254725	XM_976343.2	Fry	XP_981437.2	ILMN_2623288	001010240	S	4905	TATGCAGTCAGAACGAGGCCCGCACTGCAGTGTCCTCCATGCTGTGGAAG				5qG3	PREDICTED: Mus musculus furry homolog (Drosophila) (Fry), mRNA.					
Mus musculus	RefSeq	ILMN_200501	ILMN_245449	FRY	XM_976343.2	XM_976343.2		320365	149254725	XM_976343.2	Fry	XP_981437.2	ILMN_1241726	001690220	S	9646	TTGCCTTCCTACCAACACAGCGACCTCTCCAAGATAGAACTACACCGGGT				5qG3	PREDICTED: Mus musculus furry homolog (Drosophila) (Fry), mRNA.					
Mus musculus	RefSeq	ILMN_200538	ILMN_245449	FRY	XM_976343.2	XM_976343.2		320365	149254725	XM_976343.2	Fry	XP_981437.2	ILMN_1255252	006940167	S	8460	GCTCCTGACCCTGGAGGCCGCTGTGGATAACTTGTCGGACTGCTTGAAGA				5qG3	PREDICTED: Mus musculus furry homolog (Drosophila) (Fry), mRNA.					
Mus musculus	Riken	ILMN_203128	ILMN_203128	6330565C02RIK	ri|6330565C02|PX00044O03|AK032053|2438					AK032053	6330565C02Rik		ILMN_1228786	003400129	S	1120	TGTCGGAAGAGCAAGGGAGTACGCCCCGAACCAGGCTCCTCTGGCGAGGA										
Mus musculus	RefSeq	ILMN_233673	ILMN_233673	POLD4	NM_027196.1	NM_027196.1		69745	21312395	NM_027196.1	Pold4	NP_081472.1	ILMN_2910596	005910619	S	487	CCCACGTTGTCCTTCTCTGGGCACCTCCTAGCCACCAAGAACTTCAGGAC	19	+	4233246-4233295	19qA	Mus musculus polymerase (DNA-directed), delta 4 (Pold4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence IMP]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AI463381; AW060307; p12; POLDS; 2410012M21Rik	AI463381; AW060307; p12; POLDS; 2410012M21Rik
Mus musculus	RefSeq	ILMN_185308	ILMN_242999	RASGEF1C	NM_029004.1	NM_029004.1		74563	73088861	NM_029004.1	Rasgef1c	NP_083280.1	ILMN_1231901	000050440	S	2085	CCTGCTGGTATCAGGATAGCCCTCTGGCGACAGCCGTGAAACAAGTCACT	11	+	49793566-49793615	11qB1.2-qB1.3	Mus musculus RasGEF domain family, member 1C (Rasgef1c), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	RP23-194G14.1; 9130006A14Rik	RP23-194G14.1; 9130006A14Rik
Mus musculus	RefSeq	ILMN_242999	ILMN_242999	RASGEF1C	NM_029004.1	NM_029004.1		74563	73088861	NM_029004.1	Rasgef1c	NP_083280.1	ILMN_2780125	001990086	S	1691	TGGGCACAGGAAACCTTTCTCGGGACCTCAGCCCCAGCTGACTTGGCAGG	11	+	49793172-49793221	11qB1.2-qB1.3	Mus musculus RasGEF domain family, member 1C (Rasgef1c), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	RP23-194G14.1; 9130006A14Rik	RP23-194G14.1; 9130006A14Rik
Mus musculus	RefSeq	ILMN_236622	ILMN_236622	DIP2B	NM_172819.1	NM_172819.1		239667	27370223	NM_172819.1	Dip2b	NP_766407.1	ILMN_2905040	003370326	S	4098	GGACCGCAGGGAAGACCTGTGGCTAGGAGCAGGCTTTCAGCTGACATGAA	15	+	100043478-100043527	15qF1	Mus musculus DIP2 disco-interacting protein 2 homolog B (Drosophila) (Dip2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	AI317237; AI854602; KIAA1463; 4932422C22; mKIAA1463	AI317237; AI854602; KIAA1463; 4932422C22; mKIAA1463
Mus musculus	RefSeq	ILMN_220131	ILMN_220131	SLC7A1	NM_007513.3	NM_007513.3		11987	141801995	NM_007513.3	Slc7a1	NP_031539.2	ILMN_2728091	003830768	S	2279	TGGACAGTCCCTTGGTTTACTCATCTCCCTCTGAACAAAGAAAGCAGCCC	5	-	149143811-149143860	5qG3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 (Slc7a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]	Atrc1; Rev-1; 4831426K01Rik; Atrc-1; Rec-1; AI447493; mCAT-1; Cat1	Atrc1; Rev-1; 4831426K01Rik; Atrc-1; Rec-1; AI447493; mCAT-1; Cat1
Mus musculus	RefSeq	ILMN_220131	ILMN_220131	SLC7A1	NM_007513.3	NM_007513.3		11987	141801995	NM_007513.3	Slc7a1	NP_031539.2	ILMN_2717965	007000577	S	2345	GCCGGGCGCTTCGCTGCTGCGGCCCCAGCAGAAGGGAGGCCCCCTTCTCC	5	-	149143745-149143794	5qG3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 (Slc7a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]	Atrc1; Rev-1; 4831426K01Rik; Atrc-1; Rec-1; AI447493; mCAT-1; Cat1	Atrc1; Rev-1; 4831426K01Rik; Atrc-1; Rec-1; AI447493; mCAT-1; Cat1
Mus musculus	MEEBO	ILMN_215669	ILMN_215669	D330005C11RIK	scl27033.1.1_149	NM_176905.2			31342359	NM_176905.2	D330005C11Rik		ILMN_1214938	002510528	S	2914	CCACGGCTGTGTGGATAGTGCCAGGTGTAAGACAGATATGCAAGTGTCTT										
Mus musculus	RefSeq	ILMN_239515	ILMN_239515	MINK1	NM_001045959.1	NM_001045959.1		50932	114052521	NM_001045959.1	Mink1	NP_001039424.1	ILMN_3150468	006840056	A	4724	ACCCCCAGGGAATGGAGGAGGGACCCCATAGCCAAAACATTCCCCCCTTT	11	+	70427735-70427784	11qB3	Mus musculus misshapen-like kinase 1 (zebrafish) (Mink1), transcript variant 3, mRNA.		The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10708748] [evidence IEP]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MINK; B55; RP23-122P1.6; Map4k6; Ysk2	MINK; B55; RP23-122P1.6; Map4k6; Ysk2
Mus musculus	RefSeq	ILMN_184367	ILMN_224437	2310035C23RIK	NM_173187.2	NM_173187.2		227446	142368864	NM_173187.2	2310035C23Rik	NP_775279.1	ILMN_2642411	004590014	S	3194	GGTAGCTCAGAGGGTTGTTCCTGCTCTCATTACTCTCTCCAGTGACCCTG	1	+	107637043-107637092	1qE2.1	Mus musculus RIKEN cDNA 2310035C23 gene (2310035C23Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	6430401N10; mKIAA1468	6430401N10; mKIAA1468
Mus musculus	RefSeq	ILMN_184367	ILMN_224437	2310035C23RIK	NM_173187.2	NM_173187.2		227446	142368864	NM_173187.2	2310035C23Rik	NP_775279.1	ILMN_2747839	004180064	S	4034	GTGGTAATAGAAACTTGATTTAATGGTCTGTACCAAGTCCCTATTCTATG	1	+	107650388-107650437	1qE2.1	Mus musculus RIKEN cDNA 2310035C23 gene (2310035C23Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	6430401N10; mKIAA1468	6430401N10; mKIAA1468
Mus musculus	Riken	ILMN_201884	ILMN_201884	4931408A02RIK	ri|4931408A02|PX00016C11|AK016443|1947					AK016443	4931408A02Rik		ILMN_2545349	005090358	S	337	CTGGTGTGCAAGTATCTGCTTCAGTCACTAATTCTGGTTCTCCGGGGTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221551	ILMN_330456	RPS4Y2	NR_003634.1	NR_003634.1		66184	153791840	NR_003634.1	Rps4y2		ILMN_2737090	006590008	S	113	TGGACAAACTGACCGGTGTGTTCGCGCCCCGTCCGTCTGCCGGCCCGCAC				6qG3	Mus musculus ribosomal protein S4, Y-linked 2 (Rps4y2), non-coding RNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]			1110033J19Rik; MGC59460; AA407494	1110033J19Rik; MGC59460; AA407494
Mus musculus	RefSeq	ILMN_219193	ILMN_219193	SLC7A10	NM_017394.3	NM_017394.3		53896	142354184	NM_017394.3	Slc7a10	NP_059090.2	ILMN_2705508	003450753	S	1633	GGACAAGCCCTTGAAGACACAATGAGACCTTGTAGAGACTGGAACAGCCG	7	+	35985846-35985870:35985871-35985895	7qB1	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 10 (Slc7a10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence NAS]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of neutral amino acids, amino acids with no net charge, into, out of, within or between cells [goid 15804] [evidence IDA]; The directed movement of D-serine, the dextrorotatory isomer of 2-amino-3-hydroxypropanoic acid, into, out of, within or between cells [goid 42942] [evidence IMP]; The directed movement of D-alanine, the dextrorotatory isomer of 2-aminopropanoic acid, into, out of, within or between cells [goid 42941] [evidence IMP]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [evidence IDA]	D7Bwg0847e; Asc-1; AL024237	D7Bwg0847e; Asc-1; AL024237
Mus musculus	Riken	ILMN_206535	ILMN_206535	D930038O18RIK	ri|D930038O18|PX00203K08|AK086583|2589					AK086583	D930038O18Rik		ILMN_2580825	004390019	S	2418	GCACTGCTCCAAGTACCAAGGCCACTGGTCAGAAGTCAGAGGCTAAGGGT										
Mus musculus	MEEBO	ILMN_214290	ILMN_214290	RNPC2	scl0170791.2_95	NM_133242.1			18875411	NM_133242.1	Rnpc2		ILMN_2646456	006560100	S	95	TAGATTCGCTTGGGCCTAGACGCCCTCGGGGCCCGATATTCGGGTTGGGC										
Mus musculus	RefSeq	ILMN_219292	ILMN_219292	OLFR729	NM_146278.1	NM_146278.1		258275	22129730	NM_146278.1	Olfr729	NP_666390.1	ILMN_1253398	001780446	S	886	GCTGTCATGGGAAAAATTGCTGCTCATTATCTCAGACCTCCCAAAGTAGC	14	-	50767612-50767661	14qC1	Mus musculus olfactory receptor 729 (Olfr729), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR246-6	MOR246-6
Mus musculus	RefSeq	ILMN_216833	ILMN_216833	HARS2	NM_080636.1	NM_080636.1		70791	18079342	NM_080636.1	Hars2	NP_542367.1	ILMN_2675883	006480270	S	2577	AGGATTAATTTGTGTAGACATTAGGAAATGTTTGAATATATACTGGAGAA	18	+	36951729-36951778	18qB2	Mus musculus histidyl-tRNA synthetase 2, mitochondrial (putative) (Hars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6427] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His) [goid 4821] [evidence IEA]	4631412B19Rik; Harsl; HO3; AI593507; HARSR	4631412B19Rik; Harsl; HO3; AI593507; HARSR
Mus musculus	RefSeq	ILMN_213390	ILMN_250224	OLFR770	NM_146863.1	NM_146863.1		258862	22129150	NM_146863.1	Olfr770	NP_667074.1	ILMN_2636595	001500681	S	570	CATTGAGCAGATGGTTATAGGATGTGCCGTGCTGACCTTCATCACAACCC	10	-	128570203-128570252	10qD3	Mus musculus olfactory receptor 770 (Olfr770), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR114-5	MOR114-5
Mus musculus	RefSeq	ILMN_202817	ILMN_244310	D5ERTD579E	NM_001081232.1	NM_001081232.1		320661	124486994	NM_001081232.1	D5Ertd579e	NP_001074701.1	ILMN_1236503	006840431	S	425	CAGGAGCAGACACGAGAAGGAGAGCAAGCTGAGCAGTAGCACCATCGAAG	5	-	36958905-36958954	5qB3	Mus musculus DNA segment, Chr 5, ERATO Doi 579, expressed (D5Ertd579e), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	mKIAA0232; A930018H20Rik; 9030221A05Rik	mKIAA0232; A930018H20Rik; 9030221A05Rik
Mus musculus	RefSeq	ILMN_218475	ILMN_244310	D5ERTD579E	NM_001081232.1	NM_001081232.1		320661	124486994	NM_001081232.1	D5Ertd579e	NP_001074701.1	ILMN_2696299	002070538	S	5655	CCCCACAGGGGATACGGTGGGTCATCAAAGGCAAAGGGATGACTAGATTC	5	-	36943440-36943489	5qB3	Mus musculus DNA segment, Chr 5, ERATO Doi 579, expressed (D5Ertd579e), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	mKIAA0232; A930018H20Rik; 9030221A05Rik	mKIAA0232; A930018H20Rik; 9030221A05Rik
Mus musculus	RefSeq	ILMN_252187	ILMN_252187	ADAM30	NM_027665.1	NM_027665.1		71078	33859703	NM_027665.1	Adam30	NP_081941.1	ILMN_2890895	006020195	S	2228	GAAGAAGAGGTGAGAGGGAGCGACTGGTAGGCGAGGAGGGAGAGGGAATT	3	+	97966962-97966974:97966975-97967011	3qF2.2	Mus musculus a disintegrin and metallopeptidase domain 30 (Adam30), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC132801; 4933424D07Rik; MGC132802; svph4	MGC132801; 4933424D07Rik; MGC132802; svph4
Mus musculus	MEEBO	ILMN_209506	ILMN_209506	CABIN1	scl37814.41.23_18	XM_359258.1			38090820	XM_359258.1	Cabin1		ILMN_2596448	002140097	S	2148	ACCGTCACACCACCTACCCCTACCCTGCTTTCCCCCAAAGGCAGCATCTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence ISO]		
Mus musculus	RefSeq	ILMN_199187	ILMN_199187	LOC193045	XM_111101.2	XM_111101.2			38091663	XM_111101.2	LOC193045		ILMN_1256093	000050113	S	5077	GCAGATCCTGATGGTAGGTCAAGGGACAGAGCAGTTAGCCAGCTTCCCAG										
Mus musculus	RefSeq	ILMN_210643	ILMN_210643	1700016K19RIK	NM_198637.1	NM_198637.1		74230	38348515	NM_198637.1	1700016K19Rik	NP_941039.1	ILMN_2694110	001190358	S	49	TCTGCTGTTTCCGGGCACGCAGGTCGGGGACCCGCGGGCGGATGGCCGGC	11	+	75813523-75813563:75813564-75813572	11qB5	Mus musculus RIKEN cDNA 1700016K19 gene (1700016K19Rik), mRNA.				RP23-96I9.2	RP23-96I9.2
Mus musculus	RefSeq	ILMN_210643	ILMN_210643	1700016K19RIK	NM_198637.1	NM_198637.1		74230	38348515	NM_198637.1	1700016K19Rik	NP_941039.1	ILMN_1250938	003850068	S	686	GCAGCCCAGCTCTAAGGGCGACCACGCGCATAGCTACTTTGAGGCCTCGA	11	+	75816897-75816946	11qB5	Mus musculus RIKEN cDNA 1700016K19 gene (1700016K19Rik), mRNA.				RP23-96I9.2	RP23-96I9.2
Mus musculus	RefSeq	ILMN_196935	ILMN_196935	LOC381277	XM_355219.1	XM_355219.1			38050328	XM_355219.1	LOC381277		ILMN_2526311	000270164	S	540	CACAAGGCCAGGAGCACGTCTGAGCGGAGAGCCAGTGACCAAGCAGATTT										
Mus musculus	RefSeq	ILMN_191011	ILMN_225147	ZFP459	NM_177811.3	NM_177811.3		328274	114842408	NM_177811.3	Zfp459	NP_808479.1	ILMN_1253331	002690603	S	2689	CCAGTGGCGGTGTCACCCATACTCTTTAAATAACGCATTCCCTGGGTGTG	13	-	67507240-67507289	13qB3	Mus musculus zinc finger protein 459 (Zfp459), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rslcan-14; 9930025G17Rik	Rslcan-14; 9930025G17Rik
Mus musculus	RefSeq	ILMN_200359	ILMN_200359	LOC386298	XM_359163.1	XM_359163.1			38081412	XM_359163.1	LOC386298		ILMN_1249362	003850411	S	362	CCCAAAGCGAGGCAACGCTGGAGATAGAAACCCTAGGAGAGATCTGGAAC										
Mus musculus	RefSeq	ILMN_227449	ILMN_227449	OLFR232	NM_146686.1	NM_146686.1		258681	33239085	NM_146686.1	Olfr232	NP_666897.1	ILMN_2830349	004290687	S	775	GTCTATTTGCGATCCAGCTCTGGTGGCTCCTCTAGTTTTGACAGATTTGC	19	+	12343496-12343545	19qA	Mus musculus olfactory receptor 232 (Olfr232), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr232-ps1; MOR214-3	Olfr232-ps1; MOR214-3
Mus musculus	RefSeq	ILMN_220297	ILMN_227449	OLFR232	NM_146686.1	NM_146686.1		258681	33239085	NM_146686.1	Olfr232	NP_666897.1	ILMN_2720277	002350491	S	80	CTCTTTTTGTAATGTTTTTGATGATCTACACTTTGGCTGTAACCTGGAAC	19	+	12342801-12342850	19qA	Mus musculus olfactory receptor 232 (Olfr232), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr232-ps1; MOR214-3	Olfr232-ps1; MOR214-3
Mus musculus	RefSeq	ILMN_220484	ILMN_220484	CLPS	NM_025469.2	NM_025469.2		109791	142371729	NM_025469.2	Clps	NP_079745.1	ILMN_1246265	002260253	S	391	AAGCAGTGAGATCACGCAGTTAGCTGGGTTATACCTTCTTCTCTTTCTCC	17	-	28695799-28695828:28695706-28695725	17qA3.3	Mus musculus colipase, pancreatic (Clps), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Increases the activity of an enzyme [goid 8047] [evidence IEA]	2200003J09Rik	2200003J09Rik
Mus musculus	RefSeq	ILMN_220484	ILMN_220484	CLPS	NM_025469.2	NM_025469.2		109791	142371729	NM_025469.2	Clps	NP_079745.1	ILMN_2722659	001990674	S	168	CAGTATGCAGTGTAAGAGCAGATGCTGCCAACATGACACCATCCTGGGCA	17	-	28697586-28697602:28697516-28697548	17qA3.3	Mus musculus colipase, pancreatic (Clps), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Increases the activity of an enzyme [goid 8047] [evidence IEA]	2200003J09Rik	2200003J09Rik
Mus musculus	RefSeq	ILMN_212508	ILMN_212508	OLFR1155	NM_146643.2	NM_146643.2		258636	110671322	NM_146643.2	Olfr1155	NP_666854.1	ILMN_1226210	005080592	S	562	GCCCTCTCTTGCTCTGATTCTCATCTTACCCAGTTACTGCTTTTTATTGT	2	-	87783172-87783221	2qD	Mus musculus olfactory receptor 1155 (Olfr1155), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR174-10	MOR174-10
Mus musculus	RefSeq	ILMN_193177	ILMN_257742	HUWE1	NM_021523.4	NM_021523.4		59026	146231995	NM_021523.4	Huwe1	NP_067498.4	ILMN_2494747	000290376	S	14039	CGAGACAAGATTGGCATCTGTGTTGTGGAGGTTTCAAATAAAGAGCACTC				XqF3	Mus musculus HECT, UBA and WWE domain containing 1 (Huwe1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	C80292; LASU1; Ureb1; AU041296; Ib772; Mule; C430014N20Rik; 5430439H10Rik	C80292; LASU1; Ureb1; AU041296; Ib772; Mule; C430014N20Rik; 5430439H10Rik
Mus musculus	RefSeq	ILMN_218497	ILMN_218497	4930519B02RIK	XM_125512.4	XM_125512.4		75122	149260633	XM_125512.4	4930519B02Rik	XP_125512.1	ILMN_1250559	003990136	S	875	TAACTTCATCAGAGTGGCAGCAAGCATAAGCCACCATCATGATCCTGGCC	10	-	12869540-12869589	10qA2	PREDICTED: Mus musculus RIKEN cDNA 4930519B02 gene (4930519B02Rik), mRNA.					
Mus musculus	Riken	ILMN_202325	ILMN_202325	DNM2	ri|4930447P09|PX00031L05|AK015410|1592					AK015410	Dnm2		ILMN_2548729	004760037	S	1509	GATTTTCCTCCACAGTGAACCCAGGGCAGACACTGCTAATCAACCCTGGC						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]		
Mus musculus	Riken	ILMN_202462	ILMN_202462	4930585K05RIK	ri|4930585K05|PX00036P09|AK016352|1716					AK016352	4930585K05Rik		ILMN_1235781	003990176	S	1102	GCTGCAGTGAATTAAAGAGGTGGCCCCAAACCTTGCTTCTGTGAGCTTGA										
Mus musculus	RefSeq	ILMN_186511	ILMN_240950	RNF157	XM_126776.9	XM_126776.9		217340	94391240	XM_126776.9	Rnf157	XP_126776.8	ILMN_1227878	006560092	S	792	CTGCCGGCACCTCTGCCTCTGCAACACCTGCGCAGACACCCTGCGCTACC					PREDICTED: Mus musculus ring finger protein 157 (Rnf157), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198626	ILMN_241722	EG331480	XR_002365.1	XR_002365.1		331480	94407719	XR_002365.1	EG331480		ILMN_1227202	004200356	S	1798	TGCTTCCTGGGCCAGCCAAAGCCGCAGGTGAGAACGTCCGCGGTAGAGGT	X	-	100129241-100129290	XqD	PREDICTED: Mus musculus predicted gene, EG331480 (EG331480), misc RNA.					
Mus musculus	RefSeq	ILMN_192570	ILMN_226027	ZFP777	NM_001081382.1	NM_001081382.1		72306	124487042	NM_001081382.1	Zfp777	NP_001074851.1	ILMN_1260244	002480324	S	2997	GCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACC	6	-	47975351-47975400	6qB2.3	Mus musculus zinc finger protein 777 (Zfp777), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2500002G23Rik	2500002G23Rik
Mus musculus	RefSeq	ILMN_226027	ILMN_226027	ZFP777	NM_001081382.1	NM_001081382.1		72306	124487042	NM_001081382.1	Zfp777	NP_001074851.1	ILMN_2897328	001400358	S	18	CGAGGCGGCCCCGGCTCGGGGGAGGGCAGCCCGCGCGCGCACGGACGCGC	6	-	47998046-47998095	6qB2.3	Mus musculus zinc finger protein 777 (Zfp777), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2500002G23Rik	2500002G23Rik
Mus musculus	RefSeq	ILMN_218363	ILMN_218363	OLFR484	NM_146499.1	NM_146499.1		258492	33239119	NM_146499.1	Olfr484	NP_666710.1	ILMN_1224132	000670619	S	572	CCTGTTCTGATGTCAGGATCTCTGTACTTGTTACCTCATTTTCTGCTGGC	7	-	115268154-115268203	7qE3	Mus musculus olfactory receptor 484 (Olfr484), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-16	MOR204-16
Mus musculus	MEEBO	ILMN_214321	ILMN_214321	D11LGP2E	scl0001507.1_64				20809729	BC029209	D11Lgp2e		ILMN_2646834	006450598	S	1655	ACCGGAGCACGTGCAACTTCTCTGCATCAACTGTATGGTGGCCGTGGGCT										
Mus musculus	Riken	ILMN_207138	ILMN_207138	F730006M22RIK	ri|F730006M22|PL00003A07|AK089327|3732					AK089327	F730006M22Rik		ILMN_2585323	001190242	S	3193	GCCCTTCCCTAAAAGAGAGATTCAGTGGAAAGTCCAGGGGCTGAGAGAGC										
Mus musculus	MEEBO	ILMN_193667	ILMN_193667	TNRC6	scl067309.1_16	XM_149986.1			20843472	XM_149986.1	Tnrc6		ILMN_2499334	002450594	S	9	TGATTGTAAATGTACAGTTTGGTTGTGTTTGAATTATGAAATCTTCAAAT										
Mus musculus	Riken	ILMN_204705	ILMN_204705	RANBP16	ri|A430096J21|PX00139J22|AK040442|3599					AK040442	Ranbp16		ILMN_2567012	001090196	S	3273	CTGTTGCGCATGTACAGTGTTAGGTGCTTCTCCACTATCAGGAAACAGAG										
Mus musculus	RefSeq	ILMN_231517	ILMN_231517	PHTF1	NM_013629.1	NM_013629.1		18685	7305380	NM_013629.1	Phtf1	NP_038657.1	ILMN_2939522	000050703	S	2950	CATCAGTCTCTCCACTCAGCCCCGTCTAACGAATGGAGCTTCGGCACCTC	3	+	103811034-103811083	3qF2.2	Mus musculus putative homeodomain transcription factor 1 (Phtf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AW049785; Phft; Phtf; AU041898	AW049785; Phft; Phtf; AU041898
Mus musculus	Riken	ILMN_206356	ILMN_206356	D430019N05RIK	ri|D430019N05|PX00194C09|AK084962|2046					AK084962	D430019N05Rik		ILMN_1247517	001770736	S	442	CAAACACATCTGGCCTGGGGTCAAGAGACTTAACACTGTCAGATTCCCTG										
Mus musculus	RefSeq	ILMN_200790	ILMN_312188	FRMD7	XM_001477880.1	XM_001477880.1		385354	149271299	XM_001477880.1	Frmd7	XP_001477930.1	ILMN_1225267	003180259	S	2167	GGCAAAGGAACAAAGTCACCCAGGGCCCGAATCCGCTTGTCGTCTGGTAG					PREDICTED: Mus musculus FERM domain containing 7 (Frmd7), mRNA.					
Mus musculus	RefSeq	ILMN_219244	ILMN_219244	E130303B06RIK	NM_198299.1	NM_198299.1		102124	38142469	NM_198299.1	E130303B06Rik	NP_938041.1	ILMN_2706129	006250669	S	1166	CATAGCTCAAAGACAGGAGCGTTGGGGTGGGCAGAATCGAAAGCACTTCT	8	-	108227615-108227664	8qD3	Mus musculus RIKEN cDNA E130303B06 gene (E130303B06Rik), mRNA.				AI606951	AI606951
Mus musculus	Riken	ILMN_206649	ILMN_206649	A530021E08RIK	ri|A530021E08|PX00316D01|AK079949|1768					AK079949	A530021E08Rik		ILMN_2581654	001940170	S	1345	CAGTCTGTTATTCTATGCTTTTTACATCTTGTGAGAGATGGCTCAGTGGC										
Mus musculus	RefSeq	ILMN_217585	ILMN_217585	APBA2	NM_007461.1	NM_007461.1		11784	39930316	NM_007461.1	Apba2	NP_031487.1	ILMN_2846507	006550195	S	3065	TCCGTGGCTGTGAAAGGAGTCCCCCCTGTGATGCAGCTGCAGCCTTTTCT	7	+	71898508-71898557	7qC	Mus musculus amyloid beta (A4) precursor protein-binding, family A, member 2 (Apba2), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	X11-like; X11L; mXllL; XllL	X11-like; X11L; mXllL; XllL
Mus musculus	RefSeq	ILMN_217585	ILMN_217585	APBA2	NM_007461.1	NM_007461.1		11784	39930316	NM_007461.1	Apba2	NP_031487.1	ILMN_1244923	005570315	S	2068	TTTTGGGTGTGGTGGTCGTGGAATCGGGCTGGGGCTCCATCCTGCCCACT	7	+	71889330-71889379	7qC	Mus musculus amyloid beta (A4) precursor protein-binding, family A, member 2 (Apba2), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	X11-like; X11L; mXllL; XllL	X11-like; X11L; mXllL; XllL
Mus musculus	RefSeq	ILMN_209238	ILMN_310045	LOC100044829	XM_001472872.1	XM_001472872.1		100044829	149251500	XM_001472872.1	LOC100044829	XP_001472922.1	ILMN_1215147	002140113	S	836	GTGGCCCTGAACGCCCACACCTTCCTGCGGAATGGAGGACACTTTGTGAT					PREDICTED: Mus musculus similar to Fibrillarin, transcript variant 1 (LOC100044829), mRNA.					
Mus musculus	RefSeq	ILMN_198096	ILMN_252522	LOC627476	XR_002984.1	XR_002984.1		627476	94403395	XR_002984.1	LOC627476		ILMN_1240870	007150056	S	2032	TTGTTGCCTTCCACTCAGTCCTGGGATACCTTTGTTTCTTGGCCTTTGGG				17qA3.2	PREDICTED: Mus musculus similar to putative pheromone receptor (Go-VN5) (LOC627476), mRNA.					
Mus musculus	Riken	ILMN_205180	ILMN_205180	C230096N03RIK	ri|C230096N03|PX00177F03|AK049071|2292					AK049071	C230096N03Rik		ILMN_2570596	004150382	S	2017	GTATGCTCTTGGTTGGTGTCTTAGTCTTTGGGAGCTTGCAGGGGTCTGGG										
Mus musculus	RefSeq	ILMN_254970	ILMN_254970	ZFP91	NM_053009.2	NM_053009.2		109910	90669982	NM_053009.2	Zfp91	NP_443735.2	ILMN_3153893	007050131	A	1832	ACCCCTCCTGTGGGCGACTCTTCAGGCTCCAGAAACAACTTCTGCGGCAT	19	-	12849325-12849374	19qA	Mus musculus zinc finger protein 91 (Zfp91), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Pzf; 9130014I08Rik; AW545902; A530054C17Rik; AL024263	Pzf; 9130014I08Rik; AW545902; A530054C17Rik; AL024263
Mus musculus	RefSeq	ILMN_216504	ILMN_216504	E330036I19RIK	NM_144915.2	NM_144915.2		231871	31559955	NM_144915.2	E330036I19Rik	NP_659164.2	ILMN_2976448	004850373	S	2635	GATGAGCACTTTATACTTGCCTGCGTCTTTCCGGGGTCACTAGGACAGCC				5qG2	Mus musculus RIKEN cDNA E330036I19 gene (E330036I19Rik), mRNA.				MGC27690	MGC27690
Mus musculus	RefSeq	ILMN_184989	ILMN_239824	ZFP28	NM_175247.3	NM_175247.3		22690	148276991	NM_175247.3	Zfp28	NP_780456.2	ILMN_2433124	003140487	S	4096	AATTTATGAAGAGATGAAAATATTAAATGAAATAAAGTCTATAAAAGAGA				7qA1	Mus musculus zinc finger protein 28 (Zfp28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mkr-5; 2810438M17Rik; Zfp-28	mkr-5; 2810438M17Rik; Zfp-28
Mus musculus	RefSeq	ILMN_184515	ILMN_239824	ZFP28	NM_175247.3	NM_175247.3		22690	148276991	NM_175247.3	Zfp28	NP_780456.2	ILMN_2419275	000580202	S	2556	CTCAGAGCCTCGACATTTCCACCACGCTCGTTTACCAGCTCGTCTCTCTC				7qA1	Mus musculus zinc finger protein 28 (Zfp28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mkr-5; 2810438M17Rik; Zfp-28	mkr-5; 2810438M17Rik; Zfp-28
Mus musculus	RefSeq	ILMN_184989	ILMN_239824	ZFP28	NM_175247.3	NM_175247.3		22690	148276991	NM_175247.3	Zfp28	NP_780456.2	ILMN_1249682	002000148	S	3072	CTGCATGATTATAAGGTAAGCGCTCTTAGTGAGGAGCTTACACTGTACAC				7qA1	Mus musculus zinc finger protein 28 (Zfp28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mkr-5; 2810438M17Rik; Zfp-28	mkr-5; 2810438M17Rik; Zfp-28
Mus musculus	RefSeq	ILMN_211085	ILMN_211085	BAK1	NM_007523.2	NM_007523.2		12018	111955301	NM_007523.2	Bak1	NP_031549.2	ILMN_2945835	004010161	S	1601	AACCTAGTGGGTAGGGGAAGACGCCACTTTCTCCCCAGGGCTCTCAGGTG	17	-	27157108-27157157	17qA3.3	Mus musculus BCL2-antagonist/killer 1 (Bak1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [evidence IGI]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus [goid 9620] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mycotoxin stimulus. A mycotoxin are a toxic chemical substance produced by fungi [goid 10046] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]		N-Bak; Bak; N-BAK1	N-Bak; Bak; N-BAK1
Mus musculus	RefSeq	ILMN_210773	ILMN_210773	AKAP8	NM_019774.2	NM_019774.2		56399	31560393	NM_019774.2	Akap8	NP_062748.2	ILMN_2920008	006560484	S	3612	TCAGCACTCTGTGAAGGAGCATTACTAGGGGGTAGGAGATGCACTTTGGG	17	-	32035317-32035366	17qB1	Mus musculus A kinase (PRKA) anchor protein 8 (Akap8), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence ISO]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence ISO]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IDA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence ISO]	AKAP95; AA673585; 1200016A02Rik; AU015639	AKAP95; AA673585; 1200016A02Rik; AU015639
Mus musculus	RefSeq	ILMN_219908	ILMN_219908	FKBP14	NM_153573.1	NM_153573.1		231997	23956365	NM_153573.1	Fkbp14	NP_705801.1	ILMN_1255363	007560632	S	2257	CTGGGGAGGTTGTGAGAAAGCCAGTGAGTGTCGTAGACCAGTGGTGTGTC	6	-	54527936-54527985	6qB3	Mus musculus FK506 binding protein 14 (Fkbp14), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	BC029109; MGC18737; FKBP22	BC029109; MGC18737; FKBP22
Mus musculus	RefSeq	ILMN_240997	ILMN_240997	5033413D22RIK	NM_029493.2	NM_029493.2		75973	118130598	NM_029493.2	5033413D22Rik	NP_083769.1	ILMN_2948241	000110687	S	2470	GTGTAAGGTTGCTGGTAATATCACATCTCCCATCAGGAAGCAGAGCGGGG	10	-	41268994-41269043	10qB2	Mus musculus RIKEN cDNA 5033413D22 gene (5033413D22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199088	ILMN_240997	5033413D22RIK	NM_029493.2	NM_029493.2		75973	118130598	NM_029493.2	5033413D22Rik	NP_083769.1	ILMN_1236488	004120736	S	899	AAAACTACAGCTCCTGACAGAAGAGGCTGAGCGGGCTTCGAAACGAGGCC	10	-	41270565-41270614	10qB2	Mus musculus RIKEN cDNA 5033413D22 gene (5033413D22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196650	ILMN_322908	PTCHD2	NM_001083342.1	NM_001083342.1		242748	134053934	NM_001083342.1	Ptchd2	NP_001076811.1	ILMN_1249199	002370079	S	2704	GGAGAGGTGCCCTCCTTCCAGGTGTATAGAGCGCCTTTTGGTGACTTCAC	4	-	147626958-147626987:147628344-147628363	4qE2	Mus musculus patched domain containing 2 (Ptchd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]	RNDEu-2; G630052C06Rik	RNDEu-2; G630052C06Rik
Mus musculus	RefSeq	ILMN_194425	ILMN_322908	PTCHD2	NM_001083342.1	NM_001083342.1		242748	134053934	NM_001083342.1	Ptchd2	NP_001076811.1	ILMN_1221811	001400193	S	4498	GGGGTCTCCTCTCACTGCTTCAGTGTTCGTGACTTGCTTGGGTGGGCATT	4	-	147615107-147615156	4qE2	Mus musculus patched domain containing 2 (Ptchd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]	RNDEu-2; G630052C06Rik	RNDEu-2; G630052C06Rik
Mus musculus	RefSeq	ILMN_199931	ILMN_322908	PTCHD2	NM_001083342.1	NM_001083342.1		242748	134053934	NM_001083342.1	Ptchd2	NP_001076811.1	ILMN_1239751	006770646	S	3728	AGGACATGGGTGGTGAACACGGCCACCGCAGCCACACAGATGAGTAGAGA	4	-	147617003-147617020:147617440-147617471	4qE2	Mus musculus patched domain containing 2 (Ptchd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]	RNDEu-2; G630052C06Rik	RNDEu-2; G630052C06Rik
Mus musculus	RefSeq	ILMN_245993	ILMN_245993	RRAGB	NM_001004154.1	NM_001004154.1		245670	51921310	NM_001004154.1	Rragb	NP_001004154.1	ILMN_2923671	002760465	S	2066	GAGGATTGCTGCAAGTTTAAGGCCAGCCTGTCTACATAGGGAGGTCCAGG	X	+	149606313-149606362	XqF3	Mus musculus Ras-related GTP binding B (Rragb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC69750; MGC95567	MGC69750; MGC95567
Mus musculus	RefSeq	ILMN_198693	ILMN_245993	RRAGB	NM_001004154.1	NM_001004154.1		245670	51921310	NM_001004154.1	Rragb	NP_001004154.1	ILMN_1220819	001470484	S	1559	GAAAAGCTGGAGAGAGTGGATGGACCAAAACAGTGTCTTCTCATGCGCTA	X	+	149605806-149605855	XqF3	Mus musculus Ras-related GTP binding B (Rragb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC69750; MGC95567	MGC69750; MGC95567
Mus musculus	RefSeq	ILMN_215061	ILMN_215061	RGS8	NM_026380.3	NM_026380.3		67792	71143128	NM_026380.3	Rgs8	NP_080656.2	ILMN_2732430	001770343	S	5503	GGACTCCGGGCCTCGCCAGGTTTTGGGTTTGGGGTCCTCTCAATAAACTG	1	+	155544494-155544543	1qG3	Mus musculus regulator of G-protein signaling 8 (Rgs8), mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	6530413N01Rik	6530413N01Rik
Mus musculus	RefSeq	ILMN_222439	ILMN_222439	ALG11	NM_183142.3	NM_183142.3		207958	146198858	NM_183142.3	Alg11	NP_898965.1	ILMN_1224712	003520543	S	1333	GTGTTCCATGGAGAAGTTACTTACTTAGTGTCCAGTCTGCACAGTCTGGG				8qA2	Mus musculus asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase) (Alg11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI849156; AW492253; B230397C21	AI849156; AW492253; B230397C21
Mus musculus	RefSeq	ILMN_197427	ILMN_197427	LOC381423	XM_355384.1	XM_355384.1			38075713	XM_355384.1	LOC381423		ILMN_1257131	005670397	S	395	CAGCCCATTGTTGGTGGTGCTACCTCTGTGCTGGTATCAGAAAAGCAACT										
Mus musculus	Riken	ILMN_203250	ILMN_203250	6430407L02RIK	ri|6430407L02|PX00102D09|AK032179|1883					AK032179	6430407L02Rik		ILMN_1221009	004890446	S	1309	GCAAAGTCAGTAGGTTATCTATGTCACACTGCACAGGCCCTTGTCTCCCA										
Mus musculus	RefSeq	ILMN_216222	ILMN_216222	CDCA5	NM_026410.1	NM_026410.1		67849	13385901	NM_026410.1	Cdca5	NP_080686.1	ILMN_2787871	003310196	S	1561	GACCAACCATTCCTGGGGGTTGCTGGGAACAAAAGTGGATGTATCATGGC	19	+	6091428-6091477	19qA	Mus musculus cell division cycle associated 5 (Cdca5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL024086; 2610036L13Rik; C85404; AW536684	AL024086; 2610036L13Rik; C85404; AW536684
Mus musculus	MEEBO	ILMN_193125	ILMN_193125	1700024C24RIK	scl41547.1.1_173				53850660	NM_029327	1700024C24Rik		ILMN_2500491	006330221	S	12	CAAATCCCTAAATTATCCATCATCCTATTGGCTCAGGACAGATTCAAGTT										
Mus musculus	RefSeq	ILMN_191371	ILMN_234624	C030048H21RIK	XM_975397.2	XM_975397.2		77481	149249228	XM_975397.2	C030048H21Rik	XP_980491.2	ILMN_1254328	000520228	S	5903	GCAGGTGAAAACTTCACACACTGTAGCCCGGTAATATGTACACATTTGCC	2	-	26099029-26099078	2qA3	PREDICTED: Mus musculus RIKEN cDNA C030048H21 gene (C030048H21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220128	ILMN_220128	BC031441	NM_146249.4	NM_146249.4		240120	118130188	NM_146249.4	BC031441	NP_666361.1	ILMN_2717936	006130474	S	1833	ATATTGTCACTCCAATATAGGAATACCAGACAATTTGGATAATAAAATCT	17	-	56077810-56077859	17qD	Mus musculus cDNA sequence BC031441 (BC031441), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC18735	MGC18735
Mus musculus	RefSeq	ILMN_199724	ILMN_199724	LOC383866	XM_357301.1	XM_357301.1			38076556	XM_357301.1	LOC383866		ILMN_1218963	003420132	S	476	GCAGGGATGGCTCAGGGTCACTTCTGCCAAGATTCAGCCTCCAACTGGCC										
Mus musculus	RefSeq	ILMN_222168	ILMN_312457	CTAG2	XR_035228.1	XR_035228.1		70062	149271664	XR_035228.1	Ctag2		ILMN_2745644	000020537	S	753	CTGTCCCTTTGCCTCCATATTCACTGTTTTGATTCTATCACACTGTTGTT	X	+	62302088-62302137	XqA7.1	PREDICTED: Mus musculus cancer/testis antigen 2 (Ctag2), misc RNA.					
Mus musculus	RefSeq	ILMN_188936	ILMN_188936	TNNC2	NM_009394.2	NM_009394.2		21925	46852154	NM_009394.2	Tnnc2	NP_033420.1	ILMN_2882658	003420110	S	350	AGGAACTGGCTGAGTGCTTCCGCATCTTTGACAGGAACGCAGACGGCTAC	2	-	164603092-164603108:164603231-164603263	2qH3	Mus musculus troponin C2, fast (Tnnc2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Tncs	Tncs
Mus musculus	RefSeq	ILMN_227612	ILMN_227612	OLFR748	NM_001011837.1	NM_001011837.1		258113	58801435	NM_001011837.1	Olfr748	NP_001011837.1	ILMN_3160239	006060632	S	757	GGAACCATAATGGTGATGTATGTGACTCCCAAGTCTAGCAACTCTGTTGC	14	+	51330763-51330812	14qC1	Mus musculus olfactory receptor 748 (Olfr748), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR106-9P	MOR106-9P
Mus musculus	RefSeq	ILMN_188799	ILMN_243623	LOC674050	XM_972673.2	XM_972673.2		674050	149267152	XM_972673.2	LOC674050	XP_977767.1	ILMN_1218749	007200129	S	4644	GGGGAAGGCTGTCAGTAGATATGTGTCTAATGAATGATATTGTGTTTCTC	15|NT_039622.1	+	68590-68639		PREDICTED: Mus musculus similar to adaptor protein Gads (LOC674050), mRNA.					
Mus musculus	MEEBO	ILMN_211495	ILMN_211495	1700123I01RIK	scl076663.2_30	XM_355138.1			38084826	XM_355138.1	1700123I01Rik		ILMN_1250640	003870309	S	620	CTCCTGCAGTAACTCCCCGGAGCTACCACACCTCTCTTGCTTTTGTTTTC										
Mus musculus	RefSeq	ILMN_220587	ILMN_220587	KRTAP16-7	NM_028621.3	NM_028621.3		170656	154426245	NM_028621.3	Krtap16-7	NP_082897.2	ILMN_2724096	004880671	S	515	GCTGGACAGTAGAAAACATCTCACAATGCGTGTTTGCTCCTGAGATAAAC					Mus musculus keratin associated protein 16-7 (Krtap16-7), mRNA.		The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The process occurring during the post-embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31077] [evidence IMP]; The process, occurring after embryonic development, by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35129] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; A multicellular organismal process involved in the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body [goid 22405] [evidence IMP]; The aggregation of coloring matter in a particular location in a tissue, occurring in response to an external stimulus [goid 43480] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]		KAP21.1; AI506979; Krtap21-1; 1110017B05Rik	KAP21.1; AI506979; Krtap21-1; 1110017B05Rik
Mus musculus	RefSeq	ILMN_209543	ILMN_209543	JTV1	NM_146165.1	NM_146165.1		231872	22122694	NM_146165.1	Jtv1	NP_666277.1	ILMN_1244330	001940167	S	489	TTGTCAAGTGCTTCGGGGAGCAGGCTAGGAAGCAGTCCCGCCACGAGTAT	5	-	144665452-144665501	5qG2	Mus musculus JTV1 gene (Jtv1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC36346; MGC36522; AA407225; MGC37389; AA407136; MGC30261	MGC36346; MGC36522; AA407225; MGC37389; AA407136; MGC30261
Mus musculus	RefSeq	ILMN_209543	ILMN_209543	JTV1	NM_146165.1	NM_146165.1		231872	22122694	NM_146165.1	Jtv1	NP_666277.1	ILMN_2943217	003310735	S	761	TTCCGCTCTATGAACTCCGCTTTGGGGAGGAGCCCGTGGCTGGTTGGAAA	5	-	144663806-144663855	5qG2	Mus musculus JTV1 gene (Jtv1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC36346; MGC36522; AA407225; MGC37389; AA407136; MGC30261	MGC36346; MGC36522; AA407225; MGC37389; AA407136; MGC30261
Mus musculus	RefSeq	ILMN_223315	ILMN_223315	ENPP4	NM_199016.2	NM_199016.2		224794	84872230	NM_199016.2	Enpp4	NP_950181.2	ILMN_2762380	005490138	S	1465	ATGATATTCATGCGGAGCAGAGCATCCACATCCCGTCCATTCTCCCGTCT	17	-	44236301-44236350	17qB3	Mus musculus ectonucleotide pyrophosphatase/phosphodiesterase 4 (Enpp4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	mKIAA0879; AA986363; AI195364; Gm90; 4933413N07Rik; MGC29265	mKIAA0879; AA986363; AI195364; Gm90; 4933413N07Rik; MGC29265
Mus musculus	RefSeq	ILMN_233335	ILMN_233335	DYNLL1	NM_019682.2	NM_019682.2		56455	31981034	NM_019682.2	Dynll1	NP_062656.2	ILMN_2788121	000990435	S	265	CCCTACCTGGCACTGCATTGTGGGCCGAAACTTCGGTAGTTATGTGGCAC	5	-	115559759-115559808	5qF	Mus musculus dynein light chain LC8-type 1 (Dynll1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [evidence ISA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45019] [evidence ISO]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence TAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence ISO]	Pin; DLC8; Dnclc1	Pin; DLC8; Dnclc1
Mus musculus	RefSeq	ILMN_260383	ILMN_260383	GM628	NM_001033365.2	NM_001033365.2		268816	141803126	NM_001033365.2	Gm628	NP_001028537.1	ILMN_3160644	005050619	S	1883	GCCAGGCATAGTCGCGACCAGGTATGTCAGTAGCAAAGGGCAGGTCAGTT	15	-	73617675-73617724	15qD3	Mus musculus gene model 628, (NCBI) (Gm628), mRNA.					
Mus musculus	RefSeq	ILMN_198130	ILMN_198130	LOC381074	XM_354995.1	XM_354995.1			38082089	XM_354995.1	LOC381074		ILMN_2530595	001030706	S	889	ATGCAACGATATGCGCCAAACTGGCTACTGCCCTCGGGGCCCTTTCTGTG										
Mus musculus	RefSeq	ILMN_218832	ILMN_218832	GPR162	NM_013533.3	NM_013533.3		14788	118129911	NM_013533.3	Gpr162	NP_038561.1	ILMN_2984942	005260092	S	2487	AGGCACGAGCGAGTGAGTATGCCTCATCCTGGCCCTGAGTCTATGGCAGC	6	-	124808847-124808896	6qF2	Mus musculus G protein-coupled receptor 162 (Gpr162), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	BC031437; A-2; Grca	BC031437; A-2; Grca
Mus musculus	RefSeq	ILMN_218832	ILMN_218832	GPR162	NM_013533.3	NM_013533.3		14788	118129911	NM_013533.3	Gpr162	NP_038561.1	ILMN_2704110	006650682	S	1428	TACTCGAGGGAAGCGGCGGTCCTCGCTGGATGGCTCTGAATCTGCCAAGA	6	-	124810910-124810959	6qF2	Mus musculus G protein-coupled receptor 162 (Gpr162), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	BC031437; A-2; Grca	BC031437; A-2; Grca
Mus musculus	RefSeq	ILMN_220097	ILMN_220097	ATP5F1	NM_009725.2	NM_009725.2		11950	78214311	NM_009725.2	Atp5f1	NP_033855.2	ILMN_2790486	001990451	S	607	GTGTCTGAAGAACGCGGCCGCCCTAGGTCCAGGGGTATTACAGGCAACAA	3	-	106084080-106084097:106086918-106086949	3qF2.2	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1 (Atp5f1), mRNA.	All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	C76477	C76477
Mus musculus	RefSeq	ILMN_197676	ILMN_255329	LOC229837	XR_004832.1	XR_004832.1		229837	94370398	XR_004832.1	LOC229837		ILMN_1235942	005550328	S	293	GCTACACCATGCTCCCTGACAAAGAGAGGAAGATCACCTGGGACATCATC				3qG3	PREDICTED: Mus musculus similar to adaptor-related protein complex AP-1, sigma 3 (LOC229837), mRNA.					
Mus musculus	RefSeq	ILMN_213403	ILMN_213403	RETSAT	NM_026159.4	NM_026159.4		67442	87044905	NM_026159.4	Retsat	NP_080435.3	ILMN_2769680	007150209	S	1440	GCGTGGTGTTGACTATGAGACCCTCAAAAATGCCTTCGTGGAAGCCTCTA	6	+	72556643-72556692	6qC1	Mus musculus retinol saturase (all trans retinol 13,14 reductase) (Retsat), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence IDA]	The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IDA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: all-trans-13,14-dihydroretinol + acceptor = all-trans-retinol + reduced acceptor. Note that this reaction has only been observed to occur in the opposite direction [goid 51786] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IDA]	MGC143538; 0610039N19Rik; MMT-7; Ppsig; C80029	MGC143538; 0610039N19Rik; MMT-7; Ppsig; C80029
Mus musculus	RefSeq	ILMN_213403	ILMN_213403	RETSAT	NM_026159.4	NM_026159.4		67442	87044905	NM_026159.4	Retsat	NP_080435.3	ILMN_1240471	005720612	S	1875	CGTGGTGTCCTCCCTCCTACAGCAATTCCTTGCACATATAAACAAAAACC	6	+	72557420-72557469	6qC1	Mus musculus retinol saturase (all trans retinol 13,14 reductase) (Retsat), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence IDA]	The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IDA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: all-trans-13,14-dihydroretinol + acceptor = all-trans-retinol + reduced acceptor. Note that this reaction has only been observed to occur in the opposite direction [goid 51786] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IDA]	MGC143538; 0610039N19Rik; MMT-7; Ppsig; C80029	MGC143538; 0610039N19Rik; MMT-7; Ppsig; C80029
Mus musculus	RefSeq	ILMN_206192	ILMN_248176	KCNJ6	NM_001025584.2	NM_001025584.2		16522	95006995	NM_001025584.2	Kcnj6	NP_001020755.1	ILMN_1256457	002940053	S	2284	TGTGGACACGCCCTTTGGGGTCCTTTCTATGGCCGCAGGGTCTGTTGTGT	16	-	95051338-95051387	16qC4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 6 (Kcnj6), transcript variant Girk2-1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA];  [goid 15467] [evidence IDA]	KCNJ7; BIR1; KATP2; weaver; Kir3.2; wv; GIRK2	KCNJ7; BIR1; KATP2; weaver; Kir3.2; wv; GIRK2
Mus musculus	RefSeq	ILMN_200015	ILMN_200015	LOC383101	XM_356875.1	XM_356875.1			38079857	XM_356875.1	LOC383101		ILMN_1238798	000240537	S	309	GGTCAACCTAGCCCCAGTGCTCACCCAGATCAACTTAGCCCCAGTGCTCA										
Mus musculus	RefSeq	ILMN_200896	ILMN_200896	LOC385452	XM_358236.1	XM_358236.1			38086903	XM_358236.1	LOC385452		ILMN_2540383	000610373	S	337	CTCAGCACCCTAGGTCACACTCAGTACACCGAACACACTCAGCACCCAGG										
Mus musculus	RefSeq	ILMN_212161	ILMN_212161	GRIN2A	NM_008170.2	NM_008170.2		14811	41680704	NM_008170.2	Grin2a	NP_032196.2	ILMN_2623457	004230068	S	4146	CCCTCGGACCCTTACAAACACTCATTGCCATCACAGGCAGTAAATGACAG	16	-	9578119-9578168	16qA1	Mus musculus glutamate receptor, ionotropic, NMDA2A (epsilon 1) (Grin2a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD [goid 17146] [evidence IPI]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence ISA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process by which an organism enters and maintains a periodic, readily reversible state of reduced awareness and metabolic activity. Usually accompanied by physical relaxation, the onset of sleep in humans and other mammals is marked by a change in the electrical activity of the brain [goid 30431] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42177] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42428] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IGI]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that modulates the establishment or extent of the postsynaptic membrane potential, which is generated by changes in the membrane potential of the post synaptic neuron that receives information at a synapse. The presynaptic neuron releases neurotransmitters into the synaptic cleft which bind to receptors on the postsynaptic neuron. After being bound by the neurotransmitters, these receptors can open or close an ion channel, allowing ions to enter or leave the cell and therefore altering the membrane potential of the postsynaptic neuron [goid 60078] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 51930] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another along an axis [goid 33058] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IGI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IGI]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IMP]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IGI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP]	NR2A; NMDAR2A	NR2A; NMDAR2A
Mus musculus	RefSeq	ILMN_221489	ILMN_221489	ZMAT4	NM_177086.2	NM_177086.2		320158	118130346	NM_177086.2	Zmat4	NP_796060.1	ILMN_2736314	000270068	S	3770	CCCACTTATAATGCTGTCATTCCTGCGGAACTCCCCATCTAGAGAGGCCA	8	+	25173200-25173249	8qA2	Mus musculus zinc finger, matrin type 4 (Zmat4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC90808; 9630048M01Rik	MGC90808; 9630048M01Rik
Mus musculus	Riken	ILMN_203284	ILMN_203284	9430077D24RIK	ri|9430077D24|PX00110I01|AK020492|567					AK020492	9430077D24Rik		ILMN_2556132	004390674	S	228	ATACAGTGAGGGCGGCCAACAGGAAAAGCCAGAGGTGACTGAGATGACAG										
Mus musculus	RefSeq	ILMN_217674	ILMN_217674	TMEM56	NM_178936.3	NM_178936.3		99887	118130392	NM_178936.3	Tmem56	NP_849267.1	ILMN_2966162	006280368	S	6110	TCCCCTCTCCCAGTGAACACCTTGGGAGTTTCCTCTGTTAAAACACTACT	3	-	120904990-120905039	3qG1	Mus musculus transmembrane protein 56 (Tmem56), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C730036B01Rik; AW109744; 4930577M16Rik; AU018104	C730036B01Rik; AW109744; 4930577M16Rik; AU018104
Mus musculus	RefSeq	ILMN_211610	ILMN_211610	MOGAT2	NM_177448.3	NM_177448.3		233549	34328427	NM_177448.3	Mogat2	NP_803231.1	ILMN_2854920	006330445	S	1462	GGGAGCCAAGTCTGCCCTGGCACCTACTCTATGTTTCTTCAGATTCTGGG	7	-	106367845-106367894	7qE2	Mus musculus monoacylglycerol O-acyltransferase 2 (Mogat2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]	The chemical reactions and pathways involving monoacylglycerol, any ester of glycerol in which any one of its hydroxyl groups has been acylated with a fatty acid, the other being non-esterified [goid 46462] [evidence ISA]; Any process by which nutrients are taken up from the contents of the intestine [goid 50892] [evidence IDA]; The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IDA]; The chemical reactions and pathways resulting in the formation of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 6651] [evidence IDA]; The chemical reactions and pathways resulting in the formation of triacylglycerol, any triester of glycerol [goid 19432] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IDA]; Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol [goid 3846] [evidence ISA]; Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol [goid 3846] [evidence IDA]	DGAT2L5; Mgat1l; MGAT2	DGAT2L5; Mgat1l; MGAT2
Mus musculus	RefSeq	ILMN_211610	ILMN_211610	MOGAT2	NM_177448.3	NM_177448.3		233549	34328427	NM_177448.3	Mogat2	NP_803231.1	ILMN_2617629	004670017	S	1286	CTGAGGTCTCTTCCCACAGTTGTAATGTCATTCAAACATGACCAAAGGAC	7	-	106368021-106368070	7qE2	Mus musculus monoacylglycerol O-acyltransferase 2 (Mogat2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]	The chemical reactions and pathways involving monoacylglycerol, any ester of glycerol in which any one of its hydroxyl groups has been acylated with a fatty acid, the other being non-esterified [goid 46462] [evidence ISA]; Any process by which nutrients are taken up from the contents of the intestine [goid 50892] [evidence IDA]; The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IDA]; The chemical reactions and pathways resulting in the formation of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 6651] [evidence IDA]; The chemical reactions and pathways resulting in the formation of triacylglycerol, any triester of glycerol [goid 19432] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IDA]; Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol [goid 3846] [evidence ISA]; Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol [goid 3846] [evidence IDA]	DGAT2L5; Mgat1l; MGAT2	DGAT2L5; Mgat1l; MGAT2
Mus musculus	RefSeq	ILMN_199599	ILMN_199599	MGC60742	XM_138691.2	XM_138691.2			38074881	XM_138691.2	MGC60742		ILMN_1232165	001340037	S	1450	CCGTACAGGTGTGAGGAATGTGGCAAGGACTTTTGTACTCGCTCAGGACG										
Mus musculus	Riken	ILMN_203627	ILMN_203627	E130106L05RIK	ri|E130106L05|PX00091H10|AK053541|3033					AK053541	E130106L05Rik		ILMN_2558744	002000605	S	149	CTGTGGGAAATGGAGCTTGGTTGATAGAATCCCTCCCTTGGCCCAGTCCC										
Mus musculus	RefSeq	ILMN_217474	ILMN_318090	LOC100044468	XM_001472489.1	XM_001472489.1		100044468	149262257	XM_001472489.1	LOC100044468	XP_001472539.1	ILMN_1239024	003440112	S	3472	CACTGGTGTGAAAGGTTGGTGTGAAAGGTACAATCTCAGAGGTCGGTCAG					PREDICTED: Mus musculus similar to nemo-like kinase (LOC100044468), mRNA.					
Mus musculus	MEEBO	ILMN_184726	ILMN_184726	AKAP7	scl0268287.1_11				24475996	NM_018747	Akap7		ILMN_1253342	000430326	S	1908	GCCCAAGCCTGCGTTCTTCACGGTTTGAGTAGCTTGCACTGGTTCCTTTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence ISA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISS]		
Mus musculus	RefSeq	ILMN_223185	ILMN_223185	METTL7A1	NM_027334.3	NM_027334.3		70152	142374935	NM_027334.3	Mettl7a1	NP_081610.2	ILMN_2760458	002450112	S	1816	AAGTTCTATTTTAAATGTTGATCAATAAATTCATATTCATTTAATAAATG	15	+	100144712-100144761	15qF1	Mus musculus methyltransferase like 7A1 (Mettl7a1), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	UbiE1; Aam-B; 2210414H16Rik; 3300001H21Rik	UbiE1; Aam-B; 2210414H16Rik; 3300001H21Rik
Mus musculus	Riken	ILMN_202787	ILMN_202787	VCAM1	ri|4933416C16|PX00020F19|AK030195|2538					AK030195	Vcam1		ILMN_2552295	005670333	S	1861	GAGCTTCTGTCCAGTAGCTTCAAGCATACACAGTGGTAGATGCCAGTCTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189506	ILMN_189506	SCL0003651.1_17	scl0003651.1_17	XM_356680.1			38075086	XM_356680.1	scl0003651.1_17		ILMN_2461871	001010064	S	20	GCTTGGCCTGGTTTTGTGTTGATTCCTCGAGAGCAGTCGACTTTGGGCTG										
Mus musculus	RefSeq	ILMN_219283	ILMN_219283	FOXD1	NM_008242.1	NM_008242.1		15229	6679836	NM_008242.1	Foxd1	NP_032268.1	ILMN_2706755	006100360	S	2146	AAACCAGTAAAAGTCTCCAAGAAATGCCTCTACTTGTTCACACTTGTTTG	13	+	99126355-99126404	13qD1	Mus musculus forkhead box D1 (Foxd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	FREAC4; Hfh10; Hfhbf2; BF-2; AI385632	FREAC4; Hfh10; Hfhbf2; BF-2; AI385632
Mus musculus	RefSeq	ILMN_208748	ILMN_310905	LOC100044636	XM_001472680.1	XM_001472680.1		100044636	149270884	XM_001472680.1	LOC100044636	XP_001472730.1	ILMN_2738554	005960176	S	1407	ACAGCTGGCCAAGGAACTCCTCCCCCAAGAATGCTCCATCAACAGTGTGG					PREDICTED: Mus musculus similar to Ftsj homolog (LOC100044636), mRNA.					
Mus musculus	RefSeq	ILMN_208748	ILMN_310905	LOC100044636	XM_001472680.1	XM_001472680.1		100044636	149270884	XM_001472680.1	LOC100044636	XP_001472730.1	ILMN_2675853	005090215	S	1838	CGTCAGCAACCTCCACCAAACATGATGGAGGAAAGCGTGAATGTTGTCAC					PREDICTED: Mus musculus similar to Ftsj homolog (LOC100044636), mRNA.					
Mus musculus	Riken	ILMN_205579	ILMN_205579	A630084C02RIK	ri|A630084C02|PX00147P10|AK042344|1610					AK042344	A630084C02Rik		ILMN_1254175	004260193	S	1327	CATGTGCCACCATGCCAAGCGCCTAGCCTGCATTAGAGCTATTGCTCCTG										
Mus musculus	Riken	ILMN_201720	ILMN_201720	MKRN1	ri|1500003O18|ZX00042C23|AK005137|1348					AK005137	Mkrn1		ILMN_1223261	000150296	S	947	CGGGAAGAGTTTAGTATCTTGTGCCAACCTCCAACCAGAACGACCACATT								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]		
Mus musculus	RefSeq	ILMN_195615	ILMN_195615	TUBA4A	NM_009447.2	NM_009447.2		22145	31560628	NM_009447.2	Tuba4a	NP_033473.1	ILMN_2517170	001090341	S	9	GGCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCAAT	1	-	75102343-75102343:75102344-75102392	1qC3	Mus musculus tubulin, alpha 4A (Tuba4a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Tuba4; M[a]4	Tuba4; M[a]4
Mus musculus	Riken	ILMN_203190	ILMN_203190	A930005L06RIK	ri|A930005L06|PX00065O24|AK044289|2787					AK044289	A930005L06Rik		ILMN_2555404	001430575	S	2631	TGTACCTAACCCTGTAGAGACTTGATGTGCCAGGGTGGGGGGATGTCCGG										
Mus musculus	RefSeq	ILMN_194891	ILMN_256422	TM9SF3	NM_133352.2	NM_133352.2		107358	84490411	NM_133352.2	Tm9sf3	NP_579930.1	ILMN_2707063	002350678	S	2778	CTTCCATCTTTGTTTTTGGGTTTCAATGAAGGCTTTACATAAGAAATTAT	19	-	41288648-41288697	19qC3	Mus musculus transmembrane 9 superfamily member 3 (Tm9sf3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI413748; Smbp; AI115521; 1810073M23Rik; KIAA4036; AW549777; 2810031D16Rik; mKIAA4036; AW146116	AI413748; Smbp; AI115521; 1810073M23Rik; KIAA4036; AW549777; 2810031D16Rik; mKIAA4036; AW146116
Mus musculus	RefSeq	ILMN_194891	ILMN_256422	TM9SF3	NM_133352.2	NM_133352.2		107358	84490411	NM_133352.2	Tm9sf3	NP_579930.1	ILMN_2603545	006480546	S	2579	GCTTTCTCAGTTCCATCCAAAGAAGATACAGTATGAAAGTAGAGGTGCAC	19	-	41288847-41288896	19qC3	Mus musculus transmembrane 9 superfamily member 3 (Tm9sf3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI413748; Smbp; AI115521; 1810073M23Rik; KIAA4036; AW549777; 2810031D16Rik; mKIAA4036; AW146116	AI413748; Smbp; AI115521; 1810073M23Rik; KIAA4036; AW549777; 2810031D16Rik; mKIAA4036; AW146116
Mus musculus	RefSeq	ILMN_252874	ILMN_252874	HDAC8	NM_027382.1	NM_027382.1		70315	58037202	NM_027382.1	Hdac8	NP_081658.1	ILMN_2871174	004230292	S	1143	GGCCAGACCGCAATGAGCCCCACCGAATCCAGCAAATCCTCAACTACATC	X	-	98510360-98510409	XqD	Mus musculus histone deacetylase 8 (Hdac8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]	2610007D20Rik	2610007D20Rik
Mus musculus	MEEBO	ILMN_190423	ILMN_190423	GABPB1	scl20334.2_166				6753933	NM_010249	Gabpb1		ILMN_1229797	006860037	S	14	GGGAGAGGACTGCTAGGGAAGATGAAGCTTCTGTGTGACCATGGAAAGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_220825	ILMN_220825	F2	NM_010168.2	NM_010168.2		14061	118129932	NM_010168.2	F2	NP_034298.1	ILMN_2789786	002650471	S	1773	CTCATGGGGTGAAGGATGTGACCGGAAGGGGAAATACGGCTTCTACACGC	2	-	91465642-91465691	2qE1	Mus musculus coagulation factor II (F2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IDA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]	FII; Cf2; Cf-2	FII; Cf2; Cf-2
Mus musculus	RefSeq	ILMN_223695	ILMN_223695	IFRG15	NM_022329.3	NM_022329.3		64164	141803172	NM_022329.3	Ifrg15	NP_071724.1	ILMN_2767764	002060471	S	2419	GCTTTCCCTTATGGCACCTCACCTCCGCTGATAAAACTGACATCCATCCC	1	+	157900756-157900805	1qG3	Mus musculus interferon alpha responsive gene (Ifrg15), mRNA.				AW060462; AW610675; MGC102429; 15kDa; 1110020D10Rik; C77739	AW060462; AW610675; MGC102429; 15kDa; 1110020D10Rik; C77739
Mus musculus	RefSeq	ILMN_220051	ILMN_220051	BIK	NM_007546.2	NM_007546.2		12124	118131134	NM_007546.2	Bik	NP_031572.1	ILMN_2717011	003800598	S	828	CACCCCTGTCTGTGAAGCCTTGAGGCACAGGATCTACTGGACTAGAGTCC	15	+	83374950-83374999	15qE1	Mus musculus BCL2-interacting killer (Bik), mRNA.	The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IDA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nbk; Blk; Biklk	Nbk; Blk; Biklk
Mus musculus	RefSeq	ILMN_215153	ILMN_215153	PDZD7	NM_177605.3	NM_177605.3		212684	118130455	NM_177605.3	Pdzd7	NP_808273.1	ILMN_1259672	001820670	S	1462	GGACAGGATGGGAAGGCTTTTCTAGTTCCTCAAAACTCATGGTGTGGTCC	19	-	45101683-45101732	19qC3	Mus musculus PDZ domain containing 7 (Pdzd7), mRNA.				Pdzk7; 9130207N01	Pdzk7; 9130207N01
Mus musculus	MEEBO	ILMN_185675	ILMN_185675	5430432H19RIK	scl071404.1_303						5430432H19Rik		ILMN_2429042	007510497	S	13	GTCTCCGGAACACTCCGGTACTCAGGTCCCCCAGGAAAAATCCTACAACG										
Mus musculus	RefSeq	ILMN_218738	ILMN_218738	DLK2	NM_207666.2	NM_207666.2		106565	102468233	NM_207666.2	Dlk2	NP_997549.2	ILMN_2699621	006330672	S	1362	GGAGGAGCCTTTCTAGCTACCTTCCTGCCCTCCTTCACACCTCAGACTGT	17	+	46440050-46440099	17qC	Mus musculus delta-like 2 homolog (Drosophila) (Dlk2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Egfl9; AI413481	Egfl9; AI413481
Mus musculus	RefSeq	ILMN_238517	ILMN_238517	CCDC27	NM_001033455.1	NM_001033455.1		381580	85701966	NM_001033455.1	Ccdc27	NP_001028627.1	ILMN_3142155	003800093	A	1518	GGGACTCATTGAGAAGGAAAACCTGGTCCTCCGACAGCAAGTTGCAGACT	4	-	152876795-152876809:152877072-152877106	4qE2	Mus musculus coiled-coil domain containing 27 (Ccdc27), mRNA.				Gm1035	Gm1035
Mus musculus	RefSeq	ILMN_238517	ILMN_238517	CCDC27	NM_001033455.1	NM_001033455.1		381580	85701966	NM_001033455.1	Ccdc27	NP_001028627.1	ILMN_3064339	005490437	I	2010	CTGAGACCAGGACCCTGCTGGCAAAGCCAGTCTATGTGGCTAGTTCTGTG	4	-	152870468-152870517	4qE2	Mus musculus coiled-coil domain containing 27 (Ccdc27), mRNA.				Gm1035	Gm1035
Mus musculus	RefSeq	ILMN_222205	ILMN_224982	SOX10	XM_985075.2	XM_985075.2		20665	149266994	XM_985075.2	Sox10	XP_990169.2	ILMN_1228105	004260301	S	2705	TCCATAGTCGCCATGTTCCTATCCCTCTAGCTACTCCAGCCCCGATTAAC				15qE1	PREDICTED: Mus musculus SRY-box containing gene 10 (Sox10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation [goid 48484] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system [goid 48709] [evidence IMP]; The process by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48547] [evidence IMP]; The process by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48547] [evidence IGI]; The process by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48547] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218219	ILMN_218219	RASAL1	NM_013832.3	NM_013832.3		19415	141802160	NM_013832.3	Rasal1	NP_038860.2	ILMN_1247762	005810504	S	2811	CCAGCCAGGGCATAGGAGCCTTTGGTAGGGCCCAGTCTTGTACTGACCAA	5	+	121129205-121129254	5qF	Mus musculus RAS protein activator like 1 (GAP1 like) (Rasal1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MRASAL	MRASAL
Mus musculus	RefSeq	ILMN_213584	ILMN_213584	ELTD1	NM_133222.2	NM_133222.2		170757	142385134	NM_133222.2	Eltd1	NP_573485.1	ILMN_1224540	004560121	S	3770	GTGGCCCATGACTGCCATTGTCATTCTGGGTTGGGACTGTAGAAATAGGA	3	+	151207709-151207758	3qH3	Mus musculus EGF, latrophilin seven transmembrane domain containing 1 (Eltd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Etl; ETL1; 1110033N21Rik	Etl; ETL1; 1110033N21Rik
Mus musculus	MEEBO	ILMN_223777	ILMN_223777	CXCL2	scl020310.4_115				6677884	NM_009140	Cxcl2		ILMN_2778289	004150750	S	808	GGAAGGAGTGTGCATGTTCACATCATTTTTTTGTAAGCACCGAGGAGAGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185854	ILMN_185854	NDST1	scl51375.1_32				42734443	NM_008306	Ndst1		ILMN_2430579	005290092	S	15	GAAAGGGTTTTCTATGACTGAGCTAGCTTTTCTTACGGGCAAGAGGGCTC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The chemical reactions and pathways resulting in the formation of polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages [goid 271] [evidence IMP]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IMP]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence TAS]; The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence TAS]; The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process by which the anatomical structures of neurocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The neurocranium is the portion of the vertebrate skull surrounding the brain [goid 48702] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-desulfoheparin = adenosine 3',5'-bisphosphate + heparin [goid 15016] [evidence TAS]		
Mus musculus	RefSeq	ILMN_214014	ILMN_214014	PHF13	NM_172705.1	NM_172705.1		230936	29789396	NM_172705.1	Phf13	NP_766293.1	ILMN_2882079	000130070	S	2369	GTGTCAGAATTTGGACACCTTGGTTTGGGGGTAGGTTGAGCTGGGCCAGC	4	-	151363963-151364012	4qE2	Mus musculus PHD finger protein 13 (Phf13), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC029632; Phf5	BC029632; Phf5
Mus musculus	RefSeq	ILMN_214014	ILMN_214014	PHF13	NM_172705.1	NM_172705.1		230936	29789396	NM_172705.1	Phf13	NP_766293.1	ILMN_2882078	007380500	S	2436	TGCAAACTGGGCGTGAGCCTCTCTGGGCTCCTGGTTGATGGCTAATGCTG	4	-	151363896-151363945	4qE2	Mus musculus PHD finger protein 13 (Phf13), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC029632; Phf5	BC029632; Phf5
Mus musculus	RefSeq	ILMN_215495	ILMN_232090	BCL2A1B	NM_007534.1	NM_007534.1		12045	6671625	NM_007534.1	Bcl2a1b	NP_031560.1	ILMN_2660263	000130097	S	518	CACAGGAGAATGGATACGGCGGAATGGAGGTTGGGAAGATGGCTTCATAA	9	+	89094584-89094617:89102420-89102435	9qE3.1	Mus musculus B-cell leukemia/lymphoma 2 related protein A1b (Bcl2a1b), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		A1-b	A1-b
Mus musculus	RefSeq	ILMN_186306	ILMN_186306	ZBTB5	NM_173399.2	NM_173399.2		230119	34328403	NM_173399.2	Zbtb5	NP_775575.2	ILMN_1248222	004260114	S	4029	CGGGGACTGGGGACCTGACTTTTGACTTTTAGCCTTAATTCTAGCCCGGC	4	-	45004227-45004276	4qB1	Mus musculus zinc finger and BTB domain containing 5 (Zbtb5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5930421I10; mKIAA0354; KIAA0354; AI646847; 9430083K24Rik	5930421I10; mKIAA0354; KIAA0354; AI646847; 9430083K24Rik
Mus musculus	Riken	ILMN_203979	ILMN_203979	CDON	ri|A530019B01|PX00140M19|AK040711|1694					AK040711	Cdon		ILMN_1217117	005810021	S	1442	CTGTAACTCATGAAACAGGTATGCTGGCTCGAGCCTTAGGTCAGAACTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence TAS]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence ISO]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; The process by which the anatomical structures of the embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 10172] [evidence IMP]; The process by which the anatomical structures of the embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 10172] [evidence IGI]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45663] [evidence TAS]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IGI]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_196684	ILMN_196684	B130005I07RIK	XM_284520.2	XM_284520.2			38089971	XM_284520.2	B130005I07Rik		ILMN_2525384	000520220	S	2916	TAGCAACAGCACTGGTGTGGACAGTCATCCTCGGAGCTGCACAGTGCGTC										
Mus musculus	RefSeq	ILMN_236793	ILMN_236793	EG434729	NM_001038697.1	NM_001038697.1		434729	84662778	NM_001038697.1	EG434729	NP_001033786.1	ILMN_2780736	006220286	S	184	CGATGGCATTCTACTTTGACCGTGATGACGTGGCTCAGGAGAACTTCAAG	X	+	8640399-8640448	XqA1.1	Mus musculus predicted gene, EG434729 (EG434729), mRNA.		The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223291	ILMN_223291	HNF4A	NM_008261.2	NM_008261.2		15378	46575915	NM_008261.2	Hnf4a	NP_032287.2	ILMN_1237767	002470437	S	4242	GCCCCACCATCACTGCCCAAGGGGGTAAAAAAGAGAAAAAGCCCTCAAAA	2	+	163398527-163398576	2qH3	Mus musculus hepatic nuclear factor 4, alpha (Hnf4a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Tcf14; Nr2a1; HNF-4; Tcf4; Hnf4; MODY1	Tcf14; Nr2a1; HNF-4; Tcf4; Hnf4; MODY1
Mus musculus	RefSeq	ILMN_200776	ILMN_200776	LOC384570	XM_357716.1	XM_357716.1			38086004	XM_357716.1	LOC384570		ILMN_1258018	000270735	S	87	TCACACGGCAACTAAGCAGCAGGTGCAGGACTGGAACCCAGGACCACCCA										
Mus musculus	RefSeq	ILMN_220295	ILMN_220295	MRPL4	NM_023167.2	NM_023167.2		66163	119508436	NM_023167.2	Mrpl4	NP_075656.2	ILMN_1257408	004810100	S	767	ACATTGTGGATTCCCTGGAGCTACCCACGGCAGACCCCCAGTACCTGACA	9	+	20812085-20812134	9qA3	Mus musculus mitochondrial ribosomal protein L4 (Mrpl4), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	1110017G11Rik	1110017G11Rik
Mus musculus	RefSeq	ILMN_262078	ILMN_262078	LAMC3	NM_011836.3	NM_011836.3		23928	118130018	NM_011836.3	Lamc3	NP_035966.2	ILMN_3115441	005550528	A	4518	CTTGGAGAAGGACACCAAGGTCCTGTCAGAGCTGCTTGTGAAGCTGGGGT	2	+	31796260-31796306:31800690-31800692	2qB	Mus musculus laminin gamma 3 (Lamc3), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW240805; AI562206	AW240805; AI562206
Mus musculus	RefSeq	ILMN_262078	ILMN_262078	LAMC3	NM_011836.3	NM_011836.3		23928	118130018	NM_011836.3	Lamc3	NP_035966.2	ILMN_3040693	001940139	I	5827	CCTAGGCACTGGGATAACAGCCACCTTTGCAAGCCCAATCCCTTCCCCAG	2	+	31801952-31802001	2qB	Mus musculus laminin gamma 3 (Lamc3), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW240805; AI562206	AW240805; AI562206
Mus musculus	RefSeq	ILMN_193371	ILMN_262078	LAMC3	NM_011836.3	NM_011836.3		23928	118130018	NM_011836.3	Lamc3	NP_035966.2	ILMN_1258270	002750717	S	5758	CCCAGAAATCCCTGGCATTTCTTCCTGATACCCCCTCTTTTTCTCAGAGC	2	+	31801883-31801932	2qB	Mus musculus laminin gamma 3 (Lamc3), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW240805; AI562206	AW240805; AI562206
Mus musculus	RefSeq	ILMN_193697	ILMN_319168	9430077A04RIK	XR_035286.1	XR_035286.1		320321	149265275	XR_035286.1	9430077A04Rik		ILMN_1253746	000010520	S	1649	CCTCACCAAAGGGGGAGGGGGCGTTAGCAAAGAAACTCTCATTTTTCCTT				14qB	PREDICTED: Mus musculus RIKEN cDNA 9430077A04 gene (9430077A04Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_259704	ILMN_259704	FBXL15	NM_133694.1	NM_133694.1		68431	19526865	NM_133694.1	Fbxl15	NP_598455.1	ILMN_2792047	003400138	S	879	ATGTTGGGGACACTGCGGTTCAAGAGTTGGCTCGAAACTGCCCGCAGCTC	19	+	46382805-46382854	19qC3	Mus musculus F-box and leucine-rich repeat protein 15 (Fbxl15), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		0710008C12Rik; Fbxo37	0710008C12Rik; Fbxo37
Mus musculus	RefSeq	ILMN_221837	ILMN_221837	2810003C17RIK	NM_145144.1	NM_145144.1		108897	21553104	NM_145144.1	2810003C17Rik	NP_660126.1	ILMN_2741063	003610239	S	2717	TTTTTAACCTCTCTAGTTAAGGGCTTAGCTTTCTTGGGACATCGGCTGCC	2	+	31828726-31828775	2qB	Mus musculus RIKEN cDNA 2810003C17 gene (2810003C17Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	C87647; AI043124; MGC30545; Iba2	C87647; AI043124; MGC30545; Iba2
Mus musculus	MEEBO	ILMN_216727	ILMN_216727	1700061G19RIK	scl50583.15.1_57	XM_140052.3			38082736	XM_140052.3	1700061G19Rik		ILMN_2674544	006100546	S	2478	CGACCTCCTAGGAACCCCATTCACCCTAATCTTCGTTCAAGCGCCGGCAC										
Mus musculus	MEEBO	ILMN_215386	ILMN_215386	SMURF1	scl0075788.1_158	NM_029438.2			31560056	NM_029438.2	Smurf1		ILMN_1253488	004220195	S	2526	ACCAGACCCAAAGCGTATGGCGTCTGCACGCCTCCCGCGTGGCGGGCTGA						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process by which a ubiquitin moiety, or multiple moieties, are covalently attached to the target protein, thereby initiating the degradation of that protein [goid 42787] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IMP]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISS]		
Mus musculus	RefSeq	ILMN_198708	ILMN_198708	LOC237234	XM_136166.3	XM_136166.3			38086976	XM_136166.3	LOC237234		ILMN_1240854	004890358	S	1137	GGAGAGCTTGGTGAGGGTGGAGTTGCATGTGCTAGATGTGAAGGTGAGCC										
Mus musculus	RefSeq	ILMN_215068	ILMN_214858	DOCK8	NM_028785.3	NM_028785.3		76088	62241029	NM_028785.3	Dock8	NP_083061.2	ILMN_2655163	006200369	S	1739	GCGTCCACACAAGGAGATTTTGGAATTTCCGATCCGGGAGGTGTACGTCC	19	+	25175439-25175488	19qB	Mus musculus dedicator of cytokinesis 8 (Dock8), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	5830472H07Rik; 1200017A24Rik; A130095G14Rik; AI461977	5830472H07Rik; 1200017A24Rik; A130095G14Rik; AI461977
Mus musculus	RefSeq	ILMN_214858	ILMN_214858	DOCK8	NM_028785.3	NM_028785.3		76088	62241029	NM_028785.3	Dock8	NP_083061.2	ILMN_1223407	003120397	S	7233	GCTTTGGATTGTTTTTACAGTGAACTTGGAAGAGGGAAAGAAACCTATGG	19	+	25276345-25276394	19qB	Mus musculus dedicator of cytokinesis 8 (Dock8), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	5830472H07Rik; 1200017A24Rik; A130095G14Rik; AI461977	5830472H07Rik; 1200017A24Rik; A130095G14Rik; AI461977
Mus musculus	RefSeq	ILMN_212263	ILMN_212263	HELB	NM_080446.1	NM_080446.1		117599	17978261	NM_080446.1	Helb	NP_536694.1	ILMN_2792362	004200224	S	4204	CCATCTTTCTCCCTTCTTTTGGTGCTGGAACTGAAGCCAAGGTCTCATTC	10	-	119520867-119520916	10qD2	Mus musculus helicase (DNA) B (Helb), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [evidence IDA]; The synthesis of a short RNA polymer, usually 4-15 nucleotides long, using one strand of unwound DNA as a template; the RNA then serves as a primer from which DNA polymerases extend synthesis [goid 6269] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IDA]	D10Ertd664e; AI447783	D10Ertd664e; AI447783
Mus musculus	RefSeq	ILMN_212263	ILMN_212263	HELB	NM_080446.1	NM_080446.1		117599	17978261	NM_080446.1	Helb	NP_536694.1	ILMN_2704769	004250577	S	289	GGTCCAGGTCCTGAAACCCCAGCGATCCAGGAGCTATCAAGTTCAAGGCT	10	-	119548152-119548201	10qD2	Mus musculus helicase (DNA) B (Helb), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [evidence IDA]; The synthesis of a short RNA polymer, usually 4-15 nucleotides long, using one strand of unwound DNA as a template; the RNA then serves as a primer from which DNA polymerases extend synthesis [goid 6269] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IDA]	D10Ertd664e; AI447783	D10Ertd664e; AI447783
Mus musculus	RefSeq	ILMN_212263	ILMN_212263	HELB	NM_080446.1	NM_080446.1		117599	17978261	NM_080446.1	Helb	NP_536694.1	ILMN_2624544	006560564	S	4355	CTGATGGTAATGCTTTTGTTATTTCGGGTGCCCTGGGACTGATCTGCAGC	10	-	119520716-119520765	10qD2	Mus musculus helicase (DNA) B (Helb), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [evidence IDA]; The synthesis of a short RNA polymer, usually 4-15 nucleotides long, using one strand of unwound DNA as a template; the RNA then serves as a primer from which DNA polymerases extend synthesis [goid 6269] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IDA]	D10Ertd664e; AI447783	D10Ertd664e; AI447783
Mus musculus	MEEBO	ILMN_188200	ILMN_188200	USP14	scl0002220.1_34	NM_021522.2			31560312	NM_021522.2	Usp14		ILMN_2465770	003130102	S	13	CAGAACCAAGCCACTTGTGCATCTTCAATCTTAAGACTACGGGAAATTAC						That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	Riken	ILMN_207116	ILMN_207116	4432405B04RIK	ri|C530046I12|PX00669J24|AK083080|2311					AK083080	4432405B04Rik		ILMN_1220993	005960047	S	2046	TCCATGAACAAGAATAGGTGTGGCCTGCGTTGCTCTGTTCTGACCCAGAG										
Mus musculus	RefSeq	ILMN_215942	ILMN_215942	ALOX8	NM_009661.3	NM_009661.3		11688	133893229	NM_009661.3	Alox8	NP_033791.1	ILMN_2665478	006840471	S	2962	GCCACCCCTAAAGTGAATTGTGAACCAGGTCCCCTTTGCAGAGAGTTAGA	11	-	68997644-68997693	11qB3	Mus musculus arachidonate 8-lipoxygenase (Alox8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (5Z,9E,11Z,14Z)-(8R)-8-hydroperoxyicosa-5,9,11,14-tetraenoate [goid 47677] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,11Z,13E)-(15S)-15-hydroperoxyicosa-5,8,11,13-tetraenoate [goid 50473] [evidence IEA]	Alox15b; 8S-LOX; 8-LOX	Alox15b; 8S-LOX; 8-LOX
Mus musculus	RefSeq	ILMN_228298	ILMN_228298	PRL3D1	NM_008864.2	NM_008864.2		18775	109627657	NM_008864.2	Prl3d1	NP_032890.2	ILMN_2964485	003840128	S	323	CTCCAGAGAATCGAGAGGAAGTCCACGAAACTAAAACTGAAGACCTTCTG	13	+	27188398-27188432:27190444-27190458	13qA3.1	Mus musculus prolactin family 3, subfamily d, member 1 (Prl3d1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	AI325057; PL-I; MGC76481; PL-Ia; Pl-1; Pl1; PL-I-alpha; Csh1	AI325057; PL-I; MGC76481; PL-Ia; Pl-1; Pl1; PL-I-alpha; Csh1
Mus musculus	RefSeq	ILMN_216731	ILMN_216731	PRKDC	NM_011159.2	NM_011159.2		19090	124517705	NM_011159.2	Prkdc	NP_035289.2	ILMN_1227324	002030170	S	11053	CTGGGAACCTGAAAGAGTATTCCCCCTGGATGAGTGAGTTCAAAGCGCAG	16	+	15829836-15829885	16qA2	Mus musculus protein kinase, DNA activated, catalytic polypeptide (Prkdc), mRNA.	A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which a lymphoid progenitor cell becomes committed to becoming any type of T cell [goid 2360] [evidence IMP]; The process whereby a lymphoid progenitor cell becomes committed to become any type of B cell [goid 2326] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33153] [evidence IMP]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a pro-B cell. Pro-B cells are the earliest stage of the B cell lineage and undergo heavy chain D and J gene rearrangements, although they are not fully committed [goid 2328] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; Any process that decreases the stability of a protein, making it more vulnerable to degradative processes or aggregation [goid 31648] [evidence IDA]; The process whereby a relatively unspecialized precursor cell acquires specialized features of B cells, T cells, or natural killer cells [goid 30098] [evidence IMP]; Programmed cell death of errant germ line cells that are outside the normal migratory path or ectopic to the gonad. This is an important mechanism of regulating germ cell survival within the embryo [goid 35234] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, requiring the presence of DNA [goid 4677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	XRCC7; AI326420; slip; AU019811; DNAPDcs; DNPK1; HYRC1; DNA-PKcs; scid; DNAPK	XRCC7; AI326420; slip; AU019811; DNAPDcs; DNPK1; HYRC1; DNA-PKcs; scid; DNAPK
Mus musculus	RefSeq	ILMN_215137	ILMN_251319	SCOC	NM_001039137.2	NM_001039137.2		56367	114687673	NM_001039137.2	Scoc	NP_001034226.1	ILMN_1216231	003710671	S	1693	GCCTTGATGAGTGACGTTAGCTATATGGATGTGTAATCCTCACATTGCAG	8	-	85958484-85958533	8qC2	Mus musculus short coiled-coil protein (Scoc), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2810002J11Rik; AA415030; 0610011C06Rik	2810002J11Rik; AA415030; 0610011C06Rik
Mus musculus	RefSeq	ILMN_212698	ILMN_251319	SCOC	NM_001039137.2	NM_001039137.2		56367	114687673	NM_001039137.2	Scoc	NP_001034226.1	ILMN_1239661	002190278	S	223	GGTGGAACTGGAAGAAAAGACTCGACTTATTAATCAGGTGTTGGAACTCC	8	-	85961466-85961515	8qC2	Mus musculus short coiled-coil protein (Scoc), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2810002J11Rik; AA415030; 0610011C06Rik	2810002J11Rik; AA415030; 0610011C06Rik
Mus musculus	RefSeq	ILMN_242398	ILMN_242398	EG546166	NM_001024730.1	NM_001024730.1		546166	85701561	NM_001024730.1	EG546166	NP_001019901.1	ILMN_2816736	005570189	S	1351	GGTCTCCCCCACCTCTTCTCCCAGCACAGGCCAAAGGTGGAACAAAAAGC	9	-	119982483-119982532	9qF4	Mus musculus predicted gene, EG546166 (EG546166), mRNA.					
Mus musculus	RefSeq	ILMN_196600	ILMN_196600	H2AFJ	NM_177688.2	NM_177688.2		232440	31343294	NM_177688.2	H2afj	NP_808356.1	ILMN_2994806	006900600	S	1170	TCTCCCCTCGAGTTTTAGCTGCATGGCAGCCTCTTATCCAGCACTGATTC	6	+	136773689-136773738	6qG1	Mus musculus H2A histone family, member J (H2afj), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	E130307C13; MGC118637	E130307C13; MGC118637
Mus musculus	RefSeq	ILMN_200819	ILMN_200819	LOC385359	XM_358205.1	XM_358205.1			38086349	XM_358205.1	LOC385359		ILMN_1246797	006330537	S	1312	TCTCAGACAGTCAATCTTGCTATGGGTGCAGCTCTCCAGCTTGTCATGGC										
Mus musculus	RefSeq	ILMN_223007	ILMN_223007	PRTN3	NM_011178.2	NM_011178.2		19152	31981541	NM_011178.2	Prtn3	NP_035308.2	ILMN_2758029	001780068	S	644	ATGGCATTCTTCATGGAGTGGACTCCTTCGTGATCCGCGAATGCGCCTCC	10	+	79345591-79345640	10qC1	Mus musculus proteinase 3 (Prtn3), mRNA.		The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	mPR3	mPR3
Mus musculus	RefSeq	ILMN_213523	ILMN_213523	1700016G05RIK	NM_026317.1	NM_026317.1		67690	13385811	NM_026317.1	1700016G05Rik	NP_080593.1	ILMN_2637903	005220307	S	870	GGGACGTTGGCATCTATACCAACATTTACTCATATGTACCATGGATTGAG	6	-	40464950-40464999	6qB1	Mus musculus RIKEN cDNA 1700016G05 gene (1700016G05Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195838	ILMN_195838	IGHV1S49_M34979_IG_HEAVY_VARIABLE_1S49_184	IGHV1S49_M34979_Ig_heavy_variable_1S49_184						IGHV1S49_M34979_Ig_heavy_variable_1S49_184		ILMN_2519192	000610037	S	3	GGCCTGGACAGGGCCTGGAATGGATTGGATATATTTATCTTGGAAATGGT										
Mus musculus	RefSeq	ILMN_199478	ILMN_199478	LOC383545	XM_357116.1	XM_357116.1			38050442	XM_357116.1	LOC383545		ILMN_1246313	003930221	S	414	TCTGGACAACAGAAGAGTGCATCAGGTGAACATTAGCAAAGATGGACCAG										
Mus musculus	RefSeq	ILMN_216180	ILMN_232883	NLRC4	NM_001033367.3	NM_001033367.3		268973	146198620	NM_001033367.3	Nlrc4	NP_001028539.1	ILMN_1235447	004250632	S	3656	CCCTTCAGGCGTGTTTGTGTTACTTGACCCCAAGAATACTGGGTCAAAAA				17qE2	Mus musculus NLR family, CARD domain containing 4 (Nlrc4), mRNA.		The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IMP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	CLAN; CLAND; CLAN1; 9530011P19Rik; CLANB; CLANA; IPAF; CLANC; Card12	CLAN; CLAND; CLAN1; 9530011P19Rik; CLANB; CLANA; IPAF; CLANC; Card12
Mus musculus	RefSeq	ILMN_210472	ILMN_210472	DAK	NM_145496.1	NM_145496.1		225913	21703975	NM_145496.1	Dak	NP_663471.1	ILMN_1246429	001660739	S	1975	CTGTTCCATGAAGATCGTATCTGGCTAGGTGGGTCACATGTCCGGGCAGC	19	-	10666918-10666967	19qA	Mus musculus dihydroxyacetone kinase 2 homolog (yeast) (Dak), mRNA.		The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + glycerone = ADP + glycerone phosphate [goid 4371] [evidence IEA]	BC021917; MGC28742	BC021917; MGC28742
Mus musculus	MEEBO	ILMN_189373	ILMN_189373	PDE3A	scl29391.1_88				9055303	NM_018779	Pde3a		ILMN_2460703	005220446	S	20	TGCACACCTGTCGAGCCTTCTCACAAACCAGCTCAGTTGTTTGCTCTGGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that modulates the frequency, rate or extent of meiosis, the process by which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes [goid 40020] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence IDA]		
Mus musculus	MEEBO	ILMN_223628	ILMN_223628	2310038E17RIK	scl33430.14.1_253	XM_146486.3			38089576	XM_146486.3	2310038E17Rik		ILMN_2766762	002340754	S	5356	CCCCTGTTGCTTAGAGAAGGAAGGAAAAAACATGCTGGGTTATGCCAGGG								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217164	ILMN_217164	EPHB4	NM_010144.4	NM_010144.4		13846	47087140	NM_010144.4	Ephb4	NP_034274.3	ILMN_2973206	000070471	S	3773	GTCCCAGGAGGCAGGAAGGGGCTGTCAGGACCCGGTGATGTAATCATTGG	5	+	137804433-137804482	5qG2	Mus musculus Eph receptor B4 (Ephb4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tyro11; AI042935; MDK2; Myk1; Htk	Tyro11; AI042935; MDK2; Myk1; Htk
Mus musculus	RefSeq	ILMN_185441	ILMN_185441	UXT	NM_013840.3	NM_013840.3		22294	141803139	NM_013840.3	Uxt	NP_038868.2	ILMN_1249347	001110487	S	489	ACAAGGCCTGCAGAATTTCCCAGAGCCATCTCCCCATTGACTGCATCTTC	X	-	20529085-20529095:20529096-20529134	XqA1.3	Mus musculus ubiquitously expressed transcript (Uxt), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISS]; A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species [goid 930] [evidence ISS]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51297] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence ISS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with the microtubule constituent protein beta-tubulin [goid 48487] [evidence ISS]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	0910002B17Rik	0910002B17Rik
Mus musculus	RefSeq	ILMN_215379	ILMN_322614	LOC675567	XR_034180.1	XR_034180.1		675567	149257455	XR_034180.1	LOC675567		ILMN_1213882	004010039	S	1100	CGACCCTGCTGTGTGGAGTACTTTGTAGAAAGACAACTTGAAGTAAGGGC					PREDICTED: Mus musculus similar to RCC1 domain containing 1 (LOC675567), misc RNA.					
Mus musculus	RefSeq	ILMN_215379	ILMN_322614	LOC675567	XR_034180.1	XR_034180.1		675567	149257455	XR_034180.1	LOC675567		ILMN_2691271	002710497	S	963	TTCCCCTGGGCTCAGATGCAGTTATGGCCAGCTGCGGATCCCGACACACA					PREDICTED: Mus musculus similar to RCC1 domain containing 1 (LOC675567), misc RNA.					
Mus musculus	Riken	ILMN_206488	ILMN_206488	D430012F08RIK	ri|D430012F08|PX00194M07|AK084922|3921					AK084922	D430012F08Rik		ILMN_1257494	007210341	S	3571	GGCCTTGGGGAAGCAGAATGGCGGCCTCTTAGGCAGAACAGGTTTATCAG										
Mus musculus	RefSeq	ILMN_212751	ILMN_212751	LRRTM3	NM_178678.4	NM_178678.4		216028	146198600	NM_178678.4	Lrrtm3	NP_848793.1	ILMN_2629877	005080121	S	3508	CAGGATAGATGTGCTGGAGCCGAGAAAAGCCACTACGGATCAGACAGAGC				10qB4	Mus musculus leucine rich repeat transmembrane neuronal 3 (Lrrtm3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9630044H04Rik	9630044H04Rik
Mus musculus	RefSeq	ILMN_218185	ILMN_218185	KLRK1	NM_033078.2	NM_033078.2		27007	40254134	NM_033078.2	Klrk1	NP_149069.1	ILMN_1236317	002030767	S	1135	GCCTCTAGAGAGTCTAGACTCTATTTTTGTAGTGGTCACCGAGGCCTGAG	6	-	129578054-129578103	6qF3	Mus musculus killer cell lectin-like receptor subfamily K, member 1 (Klrk1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [evidence IMP]; The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity [goid 45954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]; Any series of molecular signals generated as a consequence of binding to a C-type lectin receptor capable of cellular activation [goid 2223] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [evidence IPI]; Combining with an MHC class Ib protein complex to initiate a change in cellular activity. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families [goid 32394] [evidence IMP]	D6H12S2489E; NKG2-D; Nkg2d	D6H12S2489E; NKG2-D; Nkg2d
Mus musculus	RefSeq	ILMN_218185	ILMN_218185	KLRK1	NM_033078.2	NM_033078.2		27007	40254134	NM_033078.2	Klrk1	NP_149069.1	ILMN_2888493	006580646	S	1758	GTGAGGAGATGGACTCCTGGAGCCATGGGTATAAGTTATACACCAAATGA	6	-	129577431-129577480	6qF3	Mus musculus killer cell lectin-like receptor subfamily K, member 1 (Klrk1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [evidence IMP]; The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity [goid 45954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]; Any series of molecular signals generated as a consequence of binding to a C-type lectin receptor capable of cellular activation [goid 2223] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [evidence IPI]; Combining with an MHC class Ib protein complex to initiate a change in cellular activity. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families [goid 32394] [evidence IMP]	D6H12S2489E; NKG2-D; Nkg2d	D6H12S2489E; NKG2-D; Nkg2d
Mus musculus	RefSeq	ILMN_212282	ILMN_260135	MAST4	XM_915307.3	XM_915307.3		328329	149264607	XM_915307.3	Mast4	XP_920400.1	ILMN_2696893	004880301	S	3374	GAGCACTTGGATCAGATAAATGGGCGAAGCGAGTGTGTGGACAGTACAGA				13qD1	PREDICTED: Mus musculus microtubule associated serine/threonine kinase family member 4, transcript variant 6 (Mast4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212282	ILMN_260135	MAST4	XM_915307.3	XM_915307.3		328329	149264607	XM_915307.3	Mast4	XP_920400.1	ILMN_2624713	006840253	S	10483	GCGCTCCCAGCTGTAGACTTACCAGCTTCAGTTTGTTAGGATCTGTGCAA				13qD1	PREDICTED: Mus musculus microtubule associated serine/threonine kinase family member 4, transcript variant 6 (Mast4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	Riken	ILMN_202484	ILMN_202484	6530403M18RIK	ri|6530403M18|PX00048D04|AK018320|1379					AK018320	6530403M18Rik		ILMN_2549974	004260692	S	1201	CACGTGGGTGAGAGTCCTTGAGAGTCAGTGTCTGGAGCACAGAAAGGCCT										
Mus musculus	RefSeq	ILMN_211288	ILMN_211288	HOXB7	NM_010460.2	NM_010460.2		15415	88014651	NM_010460.2	Hoxb7	NP_034590.2	ILMN_2946183	006660474	S	1148	GGAGCCCTGAGGATCCACTAGCTTCTGCGTCTGGTGCATTTTGGCTGCTG	11	+	96151356-96151405	11qD	Mus musculus homeo box B7 (Hoxb7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Hox-2.3; AI325018	Hox-2.3; AI325018
Mus musculus	RefSeq	ILMN_211288	ILMN_211288	HOXB7	NM_010460.2	NM_010460.2		15415	88014651	NM_010460.2	Hoxb7	NP_034590.2	ILMN_2946184	002470441	S	945	CGGAAGGACATTATCTACCTGTTCTGTGGCTTTCTGGAATGTGCCTCCCC	11	+	96151153-96151202	11qD	Mus musculus homeo box B7 (Hoxb7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Hox-2.3; AI325018	Hox-2.3; AI325018
Mus musculus	MEEBO	ILMN_219573	ILMN_219573	NFIC	scl37695.8.1_48	NM_008688.2			31982162	NM_008688.2	Nfic		ILMN_2710678	003840059	S	1451	GTGGAGTCCCAGGGTGACAGTCCCAGCCTGCATTTTTGGTGGAAAATTAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	MEEBO	ILMN_209362	ILMN_209362	4931403E03RIK	scl075718.1_98	XM_144060.2			38078909	XM_144060.2	4931403E03Rik		ILMN_2595132	004250050	S	3463	CCCATCCTGTGACGGCATCTCCCTAAAGTCTGAAGAGAGCTCAGACCAGG										
Mus musculus	RefSeq	ILMN_199434	ILMN_199434	OLFR1371	NM_207253.1	NM_207253.1		276865	46402258	NM_207253.1	Olfr1371	NP_997136.1	ILMN_1242481	003140463	S	759	GGTATCTCCACATACCTCCAACCTGTCCACAGGTATTCTGAGAAGGAGGG	11	-	52026681-52026730	11qB1.3	Mus musculus olfactory receptor 1371 (Olfr1371), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-58; GA_x6K02T2QP88-3214035-3214970; MGC123570	MOR256-58; GA_x6K02T2QP88-3214035-3214970; MGC123570
Mus musculus	RefSeq	ILMN_213480	ILMN_213480	ERMN	NM_029972.3	NM_029972.3		77767	142361751	NM_029972.3	Ermn	NP_084248.2	ILMN_2637438	001500477	S	1005	AAAGCAACATGGAAATAACCATAGACAAAACTTATTTGGGTAACTAGAAA	2	-	57899992-57900041	2qC1.1	Mus musculus ermin, ERM-like protein (Ermn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; An axon part that is located adjacent to the nodes of Ranvier and surrounded by lateral loop portions of myelin sheath [goid 33270] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath [goid 33269] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IDA]; Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections [goid 31344] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	RP23-255J22.2; MGC107206; mKIAA1189; AI854460; KIAA1189; ermin	RP23-255J22.2; MGC107206; mKIAA1189; AI854460; KIAA1189; ermin
Mus musculus	RefSeq	ILMN_251334	ILMN_251334	SPAG4	NM_139151.2	NM_139151.2		245865	30841025	NM_139151.2	Spag4	NP_631890.2	ILMN_2975391	003940754	S	1811	GCTGGGAACCCAACCAGGGTCCTCTGTAAGAGCAGTCTTTCTAGCCCTGC	2	+	155760273-155760322	2qH1	Mus musculus sperm associated antigen 4 (Spag4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]			1700041K21Rik; mKIAA4118; MNCb-0953; KIAA4118; MGC130280	1700041K21Rik; mKIAA4118; MNCb-0953; KIAA4118; MGC130280
Mus musculus	RefSeq	ILMN_194207	ILMN_251334	SPAG4	NM_139151.2	NM_139151.2		245865	30841025	NM_139151.2	Spag4	NP_631890.2	ILMN_1243979	006840039	S	1912	GCGGCTCAGGTTGACTTTAACAGTCTTGACTTAGCATCGCTGGTTCTAGG	2	+	155760374-155760423	2qH1	Mus musculus sperm associated antigen 4 (Spag4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]			1700041K21Rik; mKIAA4118; MNCb-0953; KIAA4118; MGC130280	1700041K21Rik; mKIAA4118; MNCb-0953; KIAA4118; MGC130280
Mus musculus	RefSeq	ILMN_211160	ILMN_211160	LECT1	NM_010701.1	NM_010701.1		16840	6754527	NM_010701.1	Lect1	NP_034831.1	ILMN_2613149	006110019	S	1186	CTGCCAAGCAAGAATCGATATGAGAGTTGAGAACCAAAGAAGCATAGAGC	14	-	80037697-80037746	14qD3	Mus musculus leukocyte cell derived chemotaxin 1 (Lect1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30948] [evidence IMP]		ChM-I	ChM-I
Mus musculus	MEEBO	ILMN_210033	ILMN_210033	A230051G13RIK	scl0216792.1_314	NM_173785.2			31341073	NM_173785.2	A230051G13Rik		ILMN_2601525	003310296	S	1890	TCTAACCTTTGTAATGTGAACTGAGGGTCTCGCCACAAAGCCCAAGGACT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid [goid 6546] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein [goid 4047] [evidence IEA]		
Mus musculus	RefSeq	ILMN_225024	ILMN_225024	RFFL	NM_001007465.1	NM_001007465.1		67338	55925635	NM_001007465.1	Rffl	NP_001007466.1	ILMN_3048689	007650564	I	3006	ACACTGATGGCTGTGGTTAGCAACCCAAGTAACAACCAGAACCCATGCCA	11	-	82620536-82620585	11qC	Mus musculus ring finger and FYVE like domain containing protein (Rffl), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BG080975; MGC144763; 4930516L10Rik; 1700051E09Rik	BG080975; MGC144763; 4930516L10Rik; 1700051E09Rik
Mus musculus	RefSeq	ILMN_225024	ILMN_225024	RFFL	NM_001007465.1	NM_001007465.1		67338	55925635	NM_001007465.1	Rffl	NP_001007466.1	ILMN_3124547	000060398	A	1349	CGGCAGTATGTGATCAGAGCAGTGCACGTCTTCCGGTCCTGATGGCTAGC	11	-	82622193-82622202:82622203-82622242	11qC	Mus musculus ring finger and FYVE like domain containing protein (Rffl), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BG080975; MGC144763; 4930516L10Rik; 1700051E09Rik	BG080975; MGC144763; 4930516L10Rik; 1700051E09Rik
Mus musculus	RefSeq	ILMN_196690	ILMN_247890	GLS2	NM_001033264.2	NM_001033264.2		216456	142348692	NM_001033264.2	Gls2	NP_001028436.1	ILMN_2762640	003610382	S	1998	GCCCCATCAGTTCAGTGCACAGCACAGAGAAAAGCCTCAATGGATACCTG	10	+	127646653-127646702	10qD3	Mus musculus glutaminase 2 (liver, mitochondrial) (Gls2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [evidence IEA]	A330074B06Rik; AI195532; GLS; mKIAA4146; KIAA4146; GA; Lga	A330074B06Rik; AI195532; GLS; mKIAA4146; KIAA4146; GA; Lga
Mus musculus	RefSeq	ILMN_215582	ILMN_215582	STX11	XM_203312.6	XM_203312.6		74732	94387929	XM_203312.6	Stx11	XP_203312.1	ILMN_2661279	000160326	S	285	GCTGCTTTGCTCTTCGCGCGGAGAATGAGGTGTCTTCACACACAGCTCCT	10	-	12664021-12664070	10qA1	PREDICTED: Mus musculus syntaxin 11, transcript variant 1 (Stx11), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221078	ILMN_221078	SNAP29	NM_023348.4	NM_023348.4		67474	139948567	NM_023348.4	Snap29	NP_075837.3	ILMN_2730767	002340092	S	3238	CCGTTACTGACGTGTAACTTAGCAGCATTAGAGTGACGTCTTCAGTTGGT	16	+	17430725-17430774	16qA3	Mus musculus synaptosomal-associated protein 29 (Snap29), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence ISO]	AU020222; 1300018G05Rik; BB131856; AI891940; Gs32	AU020222; 1300018G05Rik; BB131856; AI891940; Gs32
Mus musculus	RefSeq	ILMN_217091	ILMN_217091	GLOXD1	NM_146256.2	NM_146256.2		242642	31981934	NM_146256.2	Gloxd1	NP_666368.1	ILMN_2819603	006480609	S	1295	GGCCAGAACAACATCAGGGCACTATGGCAGTCGGTGCAAGAGGAAGCAGC	4	-	116318096-116318145	4qD1	Mus musculus glyoxalase domain containing 1 (Gloxd1), mRNA.				A830048M07Rik; MGC31514; BC034099	A830048M07Rik; MGC31514; BC034099
Mus musculus	RefSeq	ILMN_200686	ILMN_200686	LOC383446	XM_357065.1	XM_357065.1			38085216	XM_357065.1	LOC383446		ILMN_1259296	002260356	S	629	AGGAGCCCCTAACTCCACAGGTAGAAGTCTTGGTGCTGGCCTTCAAGGTG										
Mus musculus	RefSeq	ILMN_216282	ILMN_312501	LOC100044443	XR_030683.1	XR_030683.1		100044443	149254690	XR_030683.1	LOC100044443		ILMN_2740187	000380075	S	840	AGGATGAAGAAAGAACGCCTTGCTTCAAACCAGAAGAACCGAGTGGATTT					PREDICTED: Mus musculus similar to cytochrome P450IIIA25 (LOC100044443), misc RNA.					
Mus musculus	RefSeq	ILMN_216282	ILMN_312501	LOC100044443	XR_030683.1	XR_030683.1		100044443	149254690	XR_030683.1	LOC100044443		ILMN_2669354	004040608	S	1867	TCCATTCTGAATTCTAACTGCAGCAACTATTTCTCTATCATTTTATTAAT					PREDICTED: Mus musculus similar to cytochrome P450IIIA25 (LOC100044443), misc RNA.					
Mus musculus	RefSeq	ILMN_223464	ILMN_223464	CCDC5	NM_146089.2	NM_146089.2		225745	118130237	NM_146089.2	Ccdc5	NP_666201.1	ILMN_1250852	000610689	S	915	GAGATGATGATGTCTCTATTAGTAAAACAACAGGGTTCGCTTCTGCCTTT	18	-	77996345-77996394	18qE3	Mus musculus coiled-coil domain containing 5 (Ccdc5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HEI-C; MGC36238; BC024400	HEI-C; MGC36238; BC024400
Mus musculus	RefSeq	ILMN_209147	ILMN_209147	HCRT	NM_010410.2	NM_010410.2		15171	141802328	NM_010410.2	Hcrt	NP_034540.1	ILMN_2592983	006180059	S	450	CGCTTTAGCACCCCGGGGAGGGTCCGGAGTCTGAACCCATCTTCTATCCT	11	-	100623091-100623107:100623108-100623140	11qD	Mus musculus hypocretin (Hcrt), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]		MGC151346; PPOX; MGC151320	MGC151346; PPOX; MGC151320
Mus musculus	RefSeq	ILMN_197321	ILMN_229734	SEL1L2	NM_001033296.2	NM_001033296.2		228684	142353175	NM_001033296.2	Sel1l2	NP_001028468.1	ILMN_2527715	006420164	S	1903	CACTTGGCCAGAAGATTGTACGACATGGCTGCTCAGACAAGCCCAGATGC	2	-	140056575-140056624	2qF3	Mus musculus sel-1 suppressor of lin-12-like 2 (C. elegans) (Sel1l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Gm118	Gm118
Mus musculus	RefSeq	ILMN_217180	ILMN_217180	BDNF	NM_007540.4	NM_007540.4		12064	114326462	NM_007540.4	Bdnf	NP_031566.4	ILMN_1246842	007320021	S	3642	CCTTTGTCATCGTTTTTTAACCTATTCAGGAATGCTTGGAATATCTGCTC	2	+	109566540-109566589	2qE3	Mus musculus brain derived neurotrophic factor (Bdnf), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IPI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IDA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IDA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217180	ILMN_217180	BDNF	NM_007540.4	NM_007540.4		12064	114326462	NM_007540.4	Bdnf	NP_031566.4	ILMN_1214228	001570369	S	512	GTGGGCGATCCACTGAGCAAAGCCGAACTTCTCACATGATGACTTCAAAC	2	+	109515368-109515417	2qE3	Mus musculus brain derived neurotrophic factor (Bdnf), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IPI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IDA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IDA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209805	ILMN_209805	EPHA5	NM_007937.2	NM_007937.2		13839	111154064	NM_007937.2	Epha5	NP_031963.2	ILMN_2599385	002370692	S	4617	GCTGGCTTCTGTTACCATCCAATTCAGGCAGAGGGTACTCTATATCTCCC	5	-	84486908-84486957	5qE1	Mus musculus Eph receptor A5 (Epha5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cek7; AI854630; Els1; Rek7; Ehk1; bsk; Hek7	Cek7; AI854630; Els1; Rek7; Ehk1; bsk; Hek7
Mus musculus	RefSeq	ILMN_217565	ILMN_217565	D14ERTD668E	NM_199015.1	NM_199015.1		219132	39841028	NM_199015.1	D14Ertd668e	NP_950180.1	ILMN_2827780	002810040	S	999	CCCCTGACAGTAAAAGCTGTTCCTCAGGAAAACTGGATGGGGCCTCCATG	14	-	58303077-58303126	14qC3	Mus musculus DNA segment, Chr 14, ERATO Doi 668, expressed (D14Ertd668e), mRNA.				MGC29273	MGC29273
Mus musculus	RefSeq	ILMN_255674	ILMN_255674	VMN2R28	NM_001081405.1	NM_001081405.1		665255	124487152	NM_001081405.1	Vmn2r28	NP_001074874.1	ILMN_2991488	003850056	S	481	TCTCCACATTTCCTTCAGCTTACCTATGGACCTTTCAGTTCCATCATCAA	7	-	5440318-5440359:5442059-5442066	7qA1	Mus musculus vomeronasal 2, receptor 28 (Vmn2r28), mRNA.					
Mus musculus	RefSeq	ILMN_209075	ILMN_315002	SKP2	NM_145468.1	NM_145468.1		27401	70909362	NM_145468.1	Skp2	NP_663443.1	ILMN_2592285	004040471	S	5556	GGTTGAACTGATTTCTGTCCATCGGCAATCTACACGGGAAGCGTGCGCAT	15	-	9042332-9042381	15qA1	Mus musculus S-phase kinase-associated protein 2 (p45) (Skp2), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IPI]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	FBXL1; MGC102075; MGC116668	FBXL1; MGC102075; MGC116668
Mus musculus	RefSeq	ILMN_209075	ILMN_315002	SKP2	NM_145468.1	NM_145468.1		27401	70909362	NM_145468.1	Skp2	NP_663443.1	ILMN_2663114	004850020	S	4554	TCTGGAACGAGGAAAGCAGGCAGCAAGTCCGCATGCTGGAGACCTTGGTT	15	-	9043334-9043383	15qA1	Mus musculus S-phase kinase-associated protein 2 (p45) (Skp2), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IPI]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	FBXL1; MGC102075; MGC116668	FBXL1; MGC102075; MGC116668
Mus musculus	RefSeq	ILMN_209075	ILMN_315002	SKP2	NM_145468.1	NM_145468.1		27401	70909362	NM_145468.1	Skp2	NP_663443.1	ILMN_2633697	003450243	S	1105	CAAACACCATCACCCAGCTGAACCTCAGCGGCTACCGAAAGAACCTCCAG	15	-	9051314-9051363	15qA1	Mus musculus S-phase kinase-associated protein 2 (p45) (Skp2), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IPI]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	FBXL1; MGC102075; MGC116668	FBXL1; MGC102075; MGC116668
Mus musculus	RefSeq	ILMN_185824	ILMN_315002	SKP2	NM_145468.1	NM_145468.1		27401	70909362	NM_145468.1	Skp2	NP_663443.1	ILMN_1251616	001710377	S	6075	CCAGCTGTGAGCTATTTTTGCCAACATGTCGCGGTAATACATGTCGCAGT	15	-	9041813-9041862	15qA1	Mus musculus S-phase kinase-associated protein 2 (p45) (Skp2), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IPI]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	FBXL1; MGC102075; MGC116668	FBXL1; MGC102075; MGC116668
Mus musculus	RefSeq	ILMN_223532	ILMN_310342	LOC100048037	XR_034057.1	XR_034057.1		100048037	149259598	XR_034057.1	LOC100048037		ILMN_1243433	004670209	S	353	CGTGTGTTTGACAAGGAAGGAAATGGCACCGTCATGGGTGCTGAAATCCG					PREDICTED: Mus musculus similar to myosin, light polypeptide 6, alkali, smooth muscle and non-muscle (LOC100048037), misc RNA.					
Mus musculus	RefSeq	ILMN_199773	ILMN_199773	LOC382993	XM_356787.1	XM_356787.1			38077208	XM_356787.1	LOC382993		ILMN_1215426	006550487	S	46	GAGGCAGCCGCACTATGTGCCAGCTTGTCTGAAAGGTACAGTCAGGCAGA										
Mus musculus	MEEBO	ILMN_208647	ILMN_208647	GRIN3A	scl24332.3_36	XM_205495.2			28496270	XM_205495.2	Grin3a		ILMN_1225231	000270220	S	3434	CACGCAAATATTCTCTCTACTGACAGCATAGGCCAGTTTAAAGTTTTACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP];  [goid 4972] [evidence IPI];  [goid 4972] [evidence IMP]		
Mus musculus	RefSeq	ILMN_213477	ILMN_213477	CCRL1	NM_145700.1	NM_145700.1		252837	21746186	NM_145700.1	Ccrl1	NP_663746.1	ILMN_2637408	005890091	S	720	CTGACTCAGAGAGGTCCTCTGATTTCCTCTGCGCTCCAGACGGCACCTCT	9	-	104004620-104004669	9qF1	Mus musculus chemokine (C-C motif) receptor-like 1 (Ccrl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	A630091E18Rik; CCBP2; CCR11; PPR1; CCX-CKR; Cmkbrl1; VSHK1	A630091E18Rik; CCBP2; CCR11; PPR1; CCX-CKR; Cmkbrl1; VSHK1
Mus musculus	RefSeq	ILMN_213477	ILMN_213477	CCRL1	NM_145700.1	NM_145700.1		252837	21746186	NM_145700.1	Ccrl1	NP_663746.1	ILMN_1251660	001710411	S	2082	TCTAATGACAGGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGC	9	-	104000735-104000784	9qF1	Mus musculus chemokine (C-C motif) receptor-like 1 (Ccrl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	A630091E18Rik; CCBP2; CCR11; PPR1; CCX-CKR; Cmkbrl1; VSHK1	A630091E18Rik; CCBP2; CCR11; PPR1; CCX-CKR; Cmkbrl1; VSHK1
Mus musculus	RefSeq	ILMN_217914	ILMN_213477	CCRL1	NM_145700.1	NM_145700.1		252837	21746186	NM_145700.1	Ccrl1	NP_663746.1	ILMN_2689265	004480369	S	88	CACAGACGTGAGGTAAATAGGAAACCCCATAACTGCCATTGAGTCTGGTG	9	-	104029126-104029175	9qF1	Mus musculus chemokine (C-C motif) receptor-like 1 (Ccrl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	A630091E18Rik; CCBP2; CCR11; PPR1; CCX-CKR; Cmkbrl1; VSHK1	A630091E18Rik; CCBP2; CCR11; PPR1; CCX-CKR; Cmkbrl1; VSHK1
Mus musculus	RefSeq	ILMN_213477	ILMN_213477	CCRL1	NM_145700.1	NM_145700.1		252837	21746186	NM_145700.1	Ccrl1	NP_663746.1	ILMN_2983624	006040360	S	2092	GGAAAACAGCTTGGCAGGAGGGAGAAACAACGCATTGTGCCACAAAGAGG	9	-	104000725-104000774	9qF1	Mus musculus chemokine (C-C motif) receptor-like 1 (Ccrl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	A630091E18Rik; CCBP2; CCR11; PPR1; CCX-CKR; Cmkbrl1; VSHK1	A630091E18Rik; CCBP2; CCR11; PPR1; CCX-CKR; Cmkbrl1; VSHK1
Mus musculus	RefSeq	ILMN_222311	ILMN_241009	EXOC1	NM_027270.1	NM_027270.1		69940	89111938	NM_027270.1	Exoc1	NP_081546.1	ILMN_2747828	001030719	S	3084	CCTTCAGCACTTTCCAGGGACCAGGCAGGACATTTTGCTTTACTGCCAGC	5	+	76999023-76999072	5qC3.3	Mus musculus exocyst complex component 1 (Exoc1), mRNA. XM_895832 XM_895848 XM_916035		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Sec3l1; 2810407P21Rik; A730011E05Rik; Sec3p; SEC3	Sec3l1; 2810407P21Rik; A730011E05Rik; Sec3p; SEC3
Mus musculus	MEEBO	ILMN_210705	ILMN_210705	B230220N19RIK	scl00319321.2_27	NM_175693.2			31342335	NM_175693.2	B230220N19Rik		ILMN_2656592	004570136	S	1106	CAATATTAACTAAAGTGTATTACAAAGCAAAATTCAGCAGGATAAAAATA										
Mus musculus	MEEBO	ILMN_210705	ILMN_210705	B230220N19RIK	scl00319321.2_27	NM_175693.2			31342335	NM_175693.2	B230220N19Rik		ILMN_1241931	005360037	S	1209	GTTTAATCATCTAATAACACAGCTCCAAAATATACAAAAAACAGGATCTG										
Mus musculus	MEEBO	ILMN_210705	ILMN_210705	B230220N19RIK	scl00319321.2_27	NM_175693.2			31342335	NM_175693.2	B230220N19Rik		ILMN_2608351	004390491	S	2266	AGTCATTGAGGGATTACAGTTCAAATCACAATGAGGTATCATTTCACACC										
Mus musculus	RefSeq	ILMN_212271	ILMN_212271	MAPK14	NM_011951.2	NM_011951.2		26416	142367641	NM_011951.2	Mapk14	NP_036081.1	ILMN_2721809	002850450	S	2952	GTTGGACGTGACAGGTCTTGTGTTTAGGTCAAGGTGTCTCCTCTCAGTGC	17	+	28883547-28883596	17qA3.3	Mus musculus mitogen-activated protein kinase 14 (Mapk14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope [goid 5623] [evidence IDA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IDA]	A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; The removal of one or more electrons from a fatty acid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen [goid 19395] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 8339] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	p38; PRKM15; PRKM14; p38-alpha; MGC102436; Crk1; p38MAPK; Mxi2; Csbp1; CSBP2	p38; PRKM15; PRKM14; p38-alpha; MGC102436; Crk1; p38MAPK; Mxi2; Csbp1; CSBP2
Mus musculus	RefSeq	ILMN_214256	ILMN_214256	KRTAP16-5	NM_130857.2	NM_130857.2		77918	114158705	NM_130857.2	Krtap16-5	NP_570927.1	ILMN_1226741	003990382	S	339	CAGCATTTGATACCTTCACTGTTTTTTCTGAGAAATCCTAGCCATGAAGC	16	-	88877895-88877944	16qC3.3	Mus musculus keratin associated protein 16-5 (Krtap16-5), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			A030006N06Rik	A030006N06Rik
Mus musculus	RefSeq	ILMN_197331	ILMN_254403	NRSN2	NM_001009948.1	NM_001009948.1		228777	57977288	NM_001009948.1	Nrsn2	NP_001009948.1	ILMN_1231743	003140553	S	1036	GTGGAATGTTTTTGCCCCTCAAAGTCCACCCCCTAGACAGCAATGCCCTC	2	-	152194788-152194837	2qG3	Mus musculus neurensin 2 (Nrsn2), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Neurensin-2; RP23-396N8.3; MGC113772; Gm123	Neurensin-2; RP23-396N8.3; MGC113772; Gm123
Mus musculus	RefSeq	ILMN_254403	ILMN_254403	NRSN2	NM_001009948.1	NM_001009948.1		228777	57977288	NM_001009948.1	Nrsn2	NP_001009948.1	ILMN_2812599	004490563	S	1269	GAGGGTTCAGGCACTTCCCACCACCTTTGTGCCCCCTCTGGTTGTACTTT	2	-	152194555-152194604	2qG3	Mus musculus neurensin 2 (Nrsn2), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Neurensin-2; RP23-396N8.3; MGC113772; Gm123	Neurensin-2; RP23-396N8.3; MGC113772; Gm123
Mus musculus	RefSeq	ILMN_258720	ILMN_258720	TIMD2	NM_134249.3	NM_134249.3		171284	34328515	NM_134249.3	Timd2	NP_599010.3	ILMN_2940135	002350754	S	966	TGGAGCTTCCCCCAAAAAAGTGGTCGAACGGACCAGATGTGAAGACCAGG	11	-	46514359-46514408	11qB1.1	Mus musculus T-cell immunoglobulin and mucin domain containing 2 (Timd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AU019358; AA816106; AU019662; C78111; Tim2	AU019358; AA816106; AU019662; C78111; Tim2
Mus musculus	RefSeq	ILMN_220836	ILMN_220836	UROC1	NM_144940.1	NM_144940.1		243537	21450100	NM_144940.1	Uroc1	NP_659189.1	ILMN_1258766	005960632	S	3266	GCCATAGCAGAGGTCAAAATCGGCTTTCTGGCATTTTGGTCTATGTTTCT	6	+	90314463-90314512	6qD1	Mus musculus urocanase domain containing 1 (Uroc1), mRNA.		The chemical reactions and pathways involving histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6547] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]	Catalysis of the reaction: 4,5-dihydro-4-oxo-5-imidazolepropanoate = urocanate + H2O [goid 16153] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	MGC37818; AI265605; BC022133	MGC37818; AI265605; BC022133
Mus musculus	MEEBO	ILMN_189879	ILMN_189879	2310058J06RIK	scl22141.1.362_235				19526913	NM_133784	2310058J06Rik		ILMN_2732997	002340292	S	700	TCTGAATCATGTGAACCTCCACCCGTCCATCACTTCCACCTCGGTGCCAC										
Mus musculus	RefSeq	ILMN_218618	ILMN_218618	SEMA3E	NM_011348.2	NM_011348.2		20349	113199776	NM_011348.2	Sema3e	NP_035478.2	ILMN_1248114	002940647	S	4208	GGCTTTTCAGTTCGGTAAGAGTAACGCAAGTGGATTGTAATAAGAACAAT	5	+	14254036-14254085	5qA1	Mus musculus sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E (Sema3e), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		mKIAA0331; Semah; AA408817	mKIAA0331; Semah; AA408817
Mus musculus	RefSeq	ILMN_220352	ILMN_218618	SEMA3E	NM_011348.2	NM_011348.2		20349	113199776	NM_011348.2	Sema3e	NP_035478.2	ILMN_2720976	005670482	S	6686	GATGATAAGCTCTGAGACTCATTCTTACCTGGTAATGGGCTACAAAGGAC	5	+	14256514-14256563	5qA1	Mus musculus sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E (Sema3e), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		mKIAA0331; Semah; AA408817	mKIAA0331; Semah; AA408817
Mus musculus	RefSeq	ILMN_199531	ILMN_199531	LOC382686	XM_356625.1	XM_356625.1			38074010	XM_356625.1	LOC382686		ILMN_2535559	006040450	S	128	TGAGCGGTAGCATAGCCCGCAATGGGCGGGAGGCTAGGGTCGCAGGGATC										
Mus musculus	MEEBO	ILMN_191234	ILMN_191234	DAF2	scl17512.4_650				6681130	NM_007827	Daf2		ILMN_2477327	007040041	S	20	GAATGGATTGCATTATTTATGGTGTCCTCGTGCCATGAGTTCAGCAAGAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]			
Mus musculus	RefSeq	ILMN_214740	ILMN_214740	BHLHB8	NM_010800.3	NM_010800.3		17341	50363366	NM_010800.3	Bhlhb8	NP_034930.1	ILMN_2664777	002750068	S	3224	CGTCAGCACAAGCAGAGAAACCTGACATGTGACGCCTCAGGAAAAAGCCA	5	+	144955040-144955089	5qG2	Mus musculus basic helix-loop-helix domain containing, class B, 8 (Bhlhb8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The directed movement of calcium ions (Ca2+) into, out of or within a mitochondrion [goid 6851] [evidence IMP]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process that establish the spatial arrangement of mitochondria within the cell [goid 48312] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	1810009C13Rik; Mist1	1810009C13Rik; Mist1
Mus musculus	RefSeq	ILMN_214740	ILMN_214740	BHLHB8	NM_010800.3	NM_010800.3		17341	50363366	NM_010800.3	Bhlhb8	NP_034930.1	ILMN_2651389	002490138	S	3214	ACCAACCTCACGTCAGCACAAGCAGAGAAACCTGACATGTGACGCCTCAG	5	+	144955030-144955079	5qG2	Mus musculus basic helix-loop-helix domain containing, class B, 8 (Bhlhb8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The directed movement of calcium ions (Ca2+) into, out of or within a mitochondrion [goid 6851] [evidence IMP]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process that establish the spatial arrangement of mitochondria within the cell [goid 48312] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	1810009C13Rik; Mist1	1810009C13Rik; Mist1
Mus musculus	Riken	ILMN_202688	ILMN_202688	A930024F09RIK	ri|A930024F09|PX00066H03|AK080730|899					AK080730	A930024F09Rik		ILMN_1238767	003290398	S	665	GTCCTGGTTTGCAGCTTGGACGCAACTGTGCTAGTTATGTACCCTCCGAC										
Mus musculus	RefSeq	ILMN_219902	ILMN_219902	SAR1B	NM_025535.1	NM_025535.1		66397	21313475	NM_025535.1	Sar1b	NP_079811.1	ILMN_2997998	006960215	S	734	CGGCCCACACACTTCCAGCCCTCAGAGATCCATCCCCCAACATGCATAAC	11	+	51604975-51605024	11qB1.3	Mus musculus SAR1 gene homolog B (S. cerevisiae) (Sar1b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Sara1b; CMRD; RP23-79E13.9; 2900019I22Rik; 2310075M17Rik; Sara2	Sara1b; CMRD; RP23-79E13.9; 2900019I22Rik; 2310075M17Rik; Sara2
Mus musculus	RefSeq	ILMN_219902	ILMN_219902	SAR1B	NM_025535.1	NM_025535.1		66397	21313475	NM_025535.1	Sar1b	NP_079811.1	ILMN_2715003	001300142	S	685	TATGGAGAAGGCTTCCGCTGGATGGCGCAGTACATCGATTAGCAGCGGCC	11	+	51604926-51604945:51604946-51604975	11qB1.3	Mus musculus SAR1 gene homolog B (S. cerevisiae) (Sar1b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Sara1b; CMRD; RP23-79E13.9; 2900019I22Rik; 2310075M17Rik; Sara2	Sara1b; CMRD; RP23-79E13.9; 2900019I22Rik; 2310075M17Rik; Sara2
Mus musculus	RefSeq	ILMN_211081	ILMN_211081	4931406C07RIK	NM_133732.2	NM_133732.2		70984	118130919	NM_133732.2	4931406C07Rik	NP_598493.1	ILMN_2612325	000630576	S	2396	CCCAATGGCAATAAGATGTGGGTCTAGGAACTCTTTAGAACTAAGCCCTA	9	-	15087899-15087948	9qA2	Mus musculus RIKEN cDNA 4931406C07 gene (4931406C07Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184489	ILMN_184489	2700089E24RIK	scl0381820.1_0				51712817	XM_355822	2700089E24Rik		ILMN_2419051	007320730	S	5	GGTACAGGAAAAGCGAGGCTTCGTTTGTTTTTGTTACTAATCTAACGTGA										
Mus musculus	MEEBO	ILMN_184489	ILMN_184489	2700089E24RIK	scl0381820.1_0				51712817	XM_355822	2700089E24Rik		ILMN_1227460	004180170	S	319	CGGGCTCCGTGATCCTCAACATCCGCCTGCAGGGTTTCTCTGGAAATTGC										
Mus musculus	MEEBO	ILMN_211257	ILMN_211257	FOXB1	scl064290.3_3				31340606	NM_022378	Foxb1		ILMN_2770246	006550132	S	2166	ACCTGTTGTCATGTGAATGTTTGCTCTTCTGGCCAGCTTTGGGGGTGGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_191690	ILMN_329689	LOC100047923	XM_001479136.1	XM_001479136.1		100047923	149274161	XM_001479136.1	LOC100047923	XP_001479186.1	ILMN_1216109	006480347	S	1081	CCACGCCCTCTCTCTAGTCAATAAGACCTTCCTGCATAACTAACAAGGAT					PREDICTED: Mus musculus hypothetical protein LOC100047923 (LOC100047923), mRNA.					
Mus musculus	Riken	ILMN_201977	ILMN_201977	3300002N10RIK	ri|3300002N10|ZX00035N20|AK014376|2067					AK014376	3300002N10Rik		ILMN_1252141	000160400	S	1823	AGTGGGGCAGGAGAGCAGTGCGGTGGAGTATGCGGTGCAGAAAGGGTTCA										
Mus musculus	RefSeq	ILMN_257286	ILMN_257286	MBD5	NM_029924.1	NM_029924.1		109241	119433654	NM_029924.1	Mbd5	NP_084200.1	ILMN_2979776	000630201	S	5436	CACAGGGCCCTAAAGGGAACAGCAATGGAGACAAGCATTGATCAGGAAGG	2	+	49172103-49172152	2qC1.1	Mus musculus methyl-CpG binding domain protein 5 (Mbd5), mRNA.				9430004D19Rik; AA536666; AI426407; C030040A15Rik	9430004D19Rik; AA536666; AI426407; C030040A15Rik
Mus musculus	RefSeq	ILMN_216768	ILMN_216768	VPS37C	NM_181403.2	NM_181403.2		107305	31340991	NM_181403.2	Vps37c	NP_852068.1	ILMN_2675152	002680619	S	2219	CCCCGGCTCTGGGTGGGCTGGAGCCTGCTTAGTAATGAAAGTGACTACAC	19	+	10788713-10788762	19qA	Mus musculus vacuolar protein sorting 37C (yeast) (Vps37c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		5730409F24Rik; AU042646	5730409F24Rik; AU042646
Mus musculus	RefSeq	ILMN_229978	ILMN_229978	DLGAP1	NM_027712.2	NM_027712.2		224997	51339020	NM_027712.2	Dlgap1	NP_081988.2	ILMN_3093132	001170164	A	2426	ACCTCCCAGAAGACATTCTAGGGAAAATCCGAACCGCGGTGGGCAGTGCC	17	+	71136535-71136549:71158528-71158562	17qE1.3	Mus musculus discs, large (Drosophila) homolog-associated protein 1 (Dlgap1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Gkap; D17Bwg0511e; KIAA4162; BB075781; AI848168; GKPA/SAPAP; Sapap1; mKIAA4162; 9630002F18; AI845682; 4933422O14Rik	Gkap; D17Bwg0511e; KIAA4162; BB075781; AI848168; GKPA/SAPAP; Sapap1; mKIAA4162; 9630002F18; AI845682; 4933422O14Rik
Mus musculus	RefSeq	ILMN_199658	ILMN_233618	LOC635470	XM_915945.3	XM_915945.3		635470	149250491	XM_915945.3	LOC635470	XP_921038.1	ILMN_2536024	003440139	S	224	GCGTCTGCCCAACAGTCAACCTGGATAAACTGTGGATATTGGTCAGCGAG	2	-	176870255-176870304	2qH4	PREDICTED: Mus musculus similar to ribosomal protein L27a-like (LOC635470), mRNA.					
Mus musculus	Riken	ILMN_206423	ILMN_206423	ELK1	ri|C230030F12|PX00174O15|AK082260|2248					AK082260	Elk1		ILMN_2579964	000620095	S	1903	GGTACCACCCTAAGTATGCTGGCCCCTACCACATCAATCACTAATCAGTA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191021	ILMN_250916	FADS6	NM_178035.3	NM_178035.3		328035	31342383	NM_178035.3	Fads6	NP_828874.2	ILMN_2625699	007150475	S	916	AGGTGAAGCCCTTGGTGTCGAAGTTTCTCCACGAGAAGCAGCTGCCTTAC	11	-	115147564-115147612:115147480-115147480	11qE2	Mus musculus fatty acid desaturase domain family, member 6 (Fads6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	BC044804	BC044804
Mus musculus	RefSeq	ILMN_186567	ILMN_186567	ZFP367	NM_175494.2	NM_175494.2		238673	31342020	NM_175494.2	Zfp367	NP_780703.1	ILMN_2897424	002940632	S	3059	GTCTTGGGAAATTTTAAATCTGATCAGCTCACCTTAAGGACAGCAGTCCA	13	-	64142660-64142709	13qB3	Mus musculus zinc finger protein 367 (Zfp367), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ZFF29a; ZFF29b; 8030486J21Rik	ZFF29a; ZFF29b; 8030486J21Rik
Mus musculus	RefSeq	ILMN_211429	ILMN_211429	NUDT11	NM_021431.2	NM_021431.2		58242	72384358	NM_021431.2	Nudt11	NP_067406.2	ILMN_2615810	001170553	S	2171	TCCTGAGGGTTCCAAAGAGGTTCTGATATGGCTGGTGGTTGTGTCTCGCT	X	+	5631417-5631466	XqA1.1	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 11 (Nudt11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: diphospho-myo-inositol polyphosphate + H2O = myo-inositol polyphosphate + phosphate [goid 8486] [evidence IDA]	DIPP3; DIPP3b	DIPP3; DIPP3b
Mus musculus	Riken	ILMN_202642	ILMN_202642	C330001K17RIK	ri|C330001K17|PX00075C06|AK021166|904					AK021166	C330001K17Rik		ILMN_2551171	001190746	S	848	GCACTTTTACCCACTGAGCCATCGTATTGATCCATCAGTAAAATCTTTAT										
Mus musculus	RefSeq	ILMN_201453	ILMN_243217	LOC676238	XM_988407.1	XM_988407.1		676238	94402349	XM_988407.1	LOC676238	XP_993501.1	ILMN_1259224	002680086	S	889	GAACACACACTGGAGAGAAACTCTATCAATGTAACCAATGTGGCAAAGCC				17qA3.1	PREDICTED: Mus musculus similar to zinc finger protein 97 (LOC676238), mRNA.					
Mus musculus	RefSeq	ILMN_213676	ILMN_213676	OLFR459	NM_146576.1	NM_146576.1		258569	22129496	NM_146576.1	Olfr459	NP_666787.1	ILMN_1252811	002900273	S	830	TGGTTTCTGTGGTCACGCCTTTTCTGAACCCCTTCATCTTCACACTTCGA	6	-	41721417-41721466	6qB2.1	Mus musculus olfactory receptor 459 (Olfr459), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR120-1	MOR120-1
Mus musculus	RefSeq	ILMN_184708	ILMN_228365	CNIH	NM_009919.1	NM_009919.1		12793	27545444	NM_009919.1	Cnih	NP_034049.1	ILMN_1237640	004560139	S	427	CTGTCAGAAGGAAGGATGGTGCAAACTCGCTTTTTACCTTCTAGCGTTTT	14	-	47398569-47398618	14qC1	Mus musculus cornichon homolog (Drosophila) (Cnih), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		0610007J15	0610007J15
Mus musculus	RefSeq	ILMN_228365	ILMN_228365	CNIH	NM_009919.1	NM_009919.1		12793	27545444	NM_009919.1	Cnih	NP_034049.1	ILMN_2838859	007550717	S	1009	CTATATGGACACAACAGTAAGAAGAATGGGGCCTCGTCCCTGTCGACTTG	14	-	47395648-47395697	14qC1	Mus musculus cornichon homolog (Drosophila) (Cnih), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		0610007J15	0610007J15
Mus musculus	Riken	ILMN_204244	ILMN_204244	A830096H11RIK	ri|A830096H11|PX00156D22|AK044162|3452					AK044162	A830096H11Rik		ILMN_1251883	003390161	S	3116	GAGCCCTGCAGTGGTTTCTTGTTTTCGCATTGAACCTTGACTGACCCAGC										
Mus musculus	RefSeq	ILMN_190158	ILMN_253790	4930578N18RIK	XM_001003948.1	XM_001003948.1		78215	94400635	XM_001003948.1	4930578N18Rik	XP_001003948.1	ILMN_2467681	003060634	S	241	CTAAACAGCAGAGCTCATCATTCAGTAGAATCCATAAGAACAGCAGGTCA				16qC3.1	PREDICTED: Mus musculus RIKEN cDNA 4930578N18 gene (4930578N18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212820	ILMN_212820	ZFP623	NM_030199.3	NM_030199.3		78834	142364325	NM_030199.3	Zfp623	NP_084475.1	ILMN_2630710	001340753	S	2400	GCTGTTTCCCCGAGGACACTAAGGATGTATCATTGGCTCCTATGTCCCTA	15	+	75779744-75779793	15qD3	Mus musculus zinc finger protein 623 (Zfp623), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610029D06Rik; AI847036; MGC101961	2610029D06Rik; AI847036; MGC101961
Mus musculus	RefSeq	ILMN_219438	ILMN_219438	DDR1	NM_007584.2	NM_007584.2		12305	119709815	NM_007584.2	Ddr1	NP_031610.1	ILMN_1257585	004200400	S	1790	ACCGCCTCCTTCTGGCCACTTACGCCCGTCCCCCTCGAGGCCCGGGCCCC	17	-	35823462-35823511	17qB1	Mus musculus discoidin domain receptor family, member 1 (Ddr1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Cak; PTK3A; CD167a; Nep; 6030432F18; AI323681	Cak; PTK3A; CD167a; Nep; 6030432F18; AI323681
Mus musculus	RefSeq	ILMN_219438	ILMN_219438	DDR1	NM_007584.2	NM_007584.2		12305	119709815	NM_007584.2	Ddr1	NP_031610.1	ILMN_2713898	003610139	S	3521	CCTGCCATGCTGCAGCTAGAACTTCGCAAAGCCTCTATGTTTCTGTGGAG	17	-	35818746-35818795	17qB1	Mus musculus discoidin domain receptor family, member 1 (Ddr1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Cak; PTK3A; CD167a; Nep; 6030432F18; AI323681	Cak; PTK3A; CD167a; Nep; 6030432F18; AI323681
Mus musculus	Riken	ILMN_204384	ILMN_204384	9930013M16RIK	ri|9930013M16|PX00119E04|AK036810|1773					AK036810	9930013M16Rik		ILMN_2564564	003800541	S	1316	GGCCCCCAGGCATGAGGCTTCATCTGTGCAATGTCGCGTACTGGCTTCTT										
Mus musculus	RefSeq	ILMN_249169	ILMN_249169	RREB1	NM_001013392.3	NM_001013392.3		68750	85719306	NM_001013392.3	Rreb1	NP_001013410.3	ILMN_3016674	005960484	I	9310	AACAAACCAGAGAGGCCCCACGGGGCGTTATCCAAGCAGCTCTGCAGAAG	13	+	38043479-38043528	13qA3.3	Mus musculus ras responsive element binding protein 1 (Rreb1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1110037N09Rik; AA414966; B930013M22Rik	1110037N09Rik; AA414966; B930013M22Rik
Mus musculus	RefSeq	ILMN_186858	ILMN_249169	RREB1	NM_001013392.3	NM_001013392.3		68750	85719306	NM_001013392.3	Rreb1	NP_001013410.3	ILMN_1255511	005670544	S	9359	GCTCCGTGAATCGGATACCGATTTCAGACAGATCATCCTGCGTTCGTCTC	13	+	38043528-38043577	13qA3.3	Mus musculus ras responsive element binding protein 1 (Rreb1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1110037N09Rik; AA414966; B930013M22Rik	1110037N09Rik; AA414966; B930013M22Rik
Mus musculus	RefSeq	ILMN_210204	ILMN_210204	IL21R	NM_021887.1	NM_021887.1		60504	11230785	NM_021887.1	Il21r	NP_068687.1	ILMN_3120000	000450750	A	304	TCCCACGCCCAGGAGACCACCCAAGTGCCCCAGCCTAAAGAATGGCTTTC	7	+	132747294-132747343	7qF3	Mus musculus interleukin 21 receptor (Il21r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISS];  [goid 4896] [evidence ISS]	NILR	NILR
Mus musculus	RefSeq	ILMN_210204	ILMN_210204	IL21R	NM_021887.1	NM_021887.1		60504	11230785	NM_021887.1	Il21r	NP_068687.1	ILMN_1259867	000580603	S	225	CTGGACTTGCACCTGACTGAACTCCTGCCCACCTCAAACCTTCACCTCCC	7	+	132747215-132747264	7qF3	Mus musculus interleukin 21 receptor (Il21r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISS];  [goid 4896] [evidence ISS]	NILR	NILR
Mus musculus	RefSeq	ILMN_210204	ILMN_210204	IL21R	NM_021887.1	NM_021887.1		60504	11230785	NM_021887.1	Il21r	NP_068687.1	ILMN_2603242	001450441	S	215	CCCCTGATTCTGGACTTGCACCTGACTGAACTCCTGCCCACCTCAAACCT	7	+	132747205-132747254	7qF3	Mus musculus interleukin 21 receptor (Il21r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISS];  [goid 4896] [evidence ISS]	NILR	NILR
Mus musculus	RefSeq	ILMN_210509	ILMN_210509	RIOK3	NM_024182.4	NM_024182.4		66878	142388970	NM_024182.4	Riok3	NP_077144.2	ILMN_2744752	005960348	S	2603	CCCAGTTCCGGGAGTTACATTGGATCCACTAACCAGCTTCACTTTCTGTC	18	+	12314818-12314867	18qA1	Mus musculus RIO kinase 3 (yeast) (Riok3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Sudd; D18Ertd331e; 1200013N13Rik; E130306C24Rik	Sudd; D18Ertd331e; 1200013N13Rik; E130306C24Rik
Mus musculus	RefSeq	ILMN_210509	ILMN_210509	RIOK3	NM_024182.4	NM_024182.4		66878	142388970	NM_024182.4	Riok3	NP_077144.2	ILMN_1215768	004290411	S	1717	CTTGTGACCCACGTGCCAGATGTGTGCAATTTTTAACTCGGCATTGAAAG	18	+	12313932-12313981	18qA1	Mus musculus RIO kinase 3 (yeast) (Riok3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Sudd; D18Ertd331e; 1200013N13Rik; E130306C24Rik	Sudd; D18Ertd331e; 1200013N13Rik; E130306C24Rik
Mus musculus	RefSeq	ILMN_210509	ILMN_210509	RIOK3	NM_024182.4	NM_024182.4		66878	142388970	NM_024182.4	Riok3	NP_077144.2	ILMN_2763548	000770338	S	825	GCTGTATTAGTACAGGAAAGGAATCTGTTGTCTTTCATGCATATGGAGGG	18	+	12301521-12301570	18qA1	Mus musculus RIO kinase 3 (yeast) (Riok3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Sudd; D18Ertd331e; 1200013N13Rik; E130306C24Rik	Sudd; D18Ertd331e; 1200013N13Rik; E130306C24Rik
Mus musculus	Riken	ILMN_202533	ILMN_202533	GNA13	ri|2610200H14|ZX00082B21|AK011851|913					AK011851	Gna13		ILMN_1249934	006840521	S	766	CAAGTCGTATTTGAGGGCCAGCGAGATGACTGGAACCCATGCTGTGGGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]		
Mus musculus	Riken	ILMN_203238	ILMN_203238	C030044K08RIK	ri|C030044K08|PX00075I14|AK047795|1789					AK047795	C030044K08Rik		ILMN_1250502	000510091	S	1399	GAGCTCAAGGCCAGTTCCATGCCCCAGAGTGTCCACACAGATCCTGTCTT										
Mus musculus	RefSeq	ILMN_200813	ILMN_200813	LOC382213	XM_356326.1	XM_356326.1			38086299	XM_356326.1	LOC382213		ILMN_1239524	004210170	S	32	TACCATTGAGGATCTGAGCGTGGAAGGGTGCAGTTGTGAAGGTGTTCACC										
Mus musculus	RefSeq	ILMN_209919	ILMN_248688	CKAP4	NM_175451.1	NM_175451.1		216197	62526117	NM_175451.1	Ckap4	NP_780660.1	ILMN_1239088	003120047	S	2820	AACCAAGATTTGTTAGTTTACTGTGAAATGAACTGTATGGCTTCTTTACA	10	-	83989095-83989144	10qC1	Mus musculus cytoskeleton-associated protein 4 (Ckap4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	5630400A09Rik; CLIMP-63; P63	5630400A09Rik; CLIMP-63; P63
Mus musculus	Riken	ILMN_203212	ILMN_203212	B230205C01RIK	ri|B230205C01|PX00069K11|AK045461|2203					AK045461	B230205C01Rik		ILMN_1238986	007000647	S	2041	CTGGGTGTCATCTCCCAAAGGCCTCACATCTTCAGTATCTCTGGGGTAGG										
Mus musculus	RefSeq	ILMN_202151	ILMN_251043	EG627299	XM_891956.3	XM_891956.3		627299	149271655	XM_891956.3	EG627299	XP_897049.3	ILMN_1254877	001450014	S	1485	GCCCAGTTCCACAGTGCTGGCTGTCATGGGCATTGTACTTTTGTTTCCTC	X	+	59085197-59085246	XqA6	PREDICTED: Mus musculus predicted gene, EG627299 (EG627299), mRNA.					
Mus musculus	RefSeq	ILMN_227824	ILMN_227824	HIST2H3C1	NM_019469.1	NM_019469.1		15077	9506766	NM_019469.1	Hist2h3c1	NP_062342.1	ILMN_3136540	007330739	A	346	AAACGCGTCACCATCATGCCCAAGGACATCCAGTTGGCCCGCCGCATCCG				3qF2.1	Mus musculus histone cluster 2, H3c1 (Hist2h3c1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	BE691662; H3f2; Hist2h3ca1; H3-615	BE691662; H3f2; Hist2h3ca1; H3-615
Mus musculus	RefSeq	ILMN_184635	ILMN_238396	TMC3	NM_177695.4	NM_177695.4		233424	110665718	NM_177695.4	Tmc3	NP_808363.3	ILMN_2495977	005820360	S	2270	CATCGCGAGATCACTCAAGCTCAGCAGCCAGCAACTCAGGATGCAGATCC	7	+	90765267-90765316	7qD3	Mus musculus transmembrane channel-like gene family 3 (Tmc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9030203A06	9030203A06
Mus musculus	RefSeq	ILMN_197159	ILMN_197159	LOC329750	XM_287286.2	XM_287286.2			38074365	XM_287286.2	LOC329750		ILMN_2527129	004200707	S	15	AGTGCACACCAGCTCCGAGATCACCACCAAGGACTTGAAGGAGAAGAGGG										
Mus musculus	RefSeq	ILMN_215041	ILMN_215041	NANS	NM_053179.3	NM_053179.3		94181	141802602	NM_053179.3	Nans	NP_444409.1	ILMN_1245757	005090541	S	1817	GGGCATGAACTCTTACCGAGGCTCACTGTCACATTCACTTTGTTCTTTGG	4	+	46516223-46516272	4qB1	Mus musculus N-acetylneuraminic acid synthase (sialic acid synthase) (Nans), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	 [goid 19007] [evidence IDA]	Sas; 4632418E04Rik	Sas; 4632418E04Rik
Mus musculus	RefSeq	ILMN_186039	ILMN_233977	ABCF3	NM_013852.2	NM_013852.2		27406	125490362	NM_013852.2	Abcf3	NP_038880.1	ILMN_2432092	003460021	S	2892	GGACCTTAAGGGCACAAGAGAAACCTTTGTTGTTCCCAGTTTGCATTAAT	16	+	20561280-20561329	16qA3	Mus musculus ATP-binding cassette, sub-family F (GCN20), member 3 (Abcf3), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	AI326318; BB119416; AU016058	AI326318; BB119416; AU016058
Mus musculus	RefSeq	ILMN_186039	ILMN_233977	ABCF3	NM_013852.2	NM_013852.2		27406	125490362	NM_013852.2	Abcf3	NP_038880.1	ILMN_2677696	001990445	S	2238	CTGGTTTTGGAAGATCCCTGAGCTACCATGTAGGCAACCAACTCCAAGCT	16	+	20560626-20560675	16qA3	Mus musculus ATP-binding cassette, sub-family F (GCN20), member 3 (Abcf3), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	AI326318; BB119416; AU016058	AI326318; BB119416; AU016058
Mus musculus	MEEBO	ILMN_224124	ILMN_224124	KIF23	scl35732.23.1_51				29568093	NM_024245	Kif23		ILMN_1220121	003840523	S	3095	GTATCCAGATCACGTTGCCCTTTTTTATTGTGACTTTTTCAACTGCTCTG						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222436	ILMN_222436	FBXO5	NM_025995.2	NM_025995.2		67141	110225373	NM_025995.2	Fbxo5	NP_080271.2	ILMN_2749583	007400411	S	1344	GGTCCTTTGCCTGGAACTAAAAAGAGTAAAAAGAACTTACAAAGATTGTG	10	+	4546920-4546969	10qA1	Mus musculus F-box protein 5 (Fbxo5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Progression through prophase of meiosis I; divided into several stages [goid 7128] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the meiotic cell cycle [goid 51442] [evidence ISO]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; Progression through metaphase, the stage of mitosis at which chromosomes are firmly attached to the mitotic spindle at its equator but have not yet segregated to opposite poles [goid 89] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart [goid 51225] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form the spindle during meiosis I of a meiotic cell cycle in females. As in, but not restricted to, the multicellular animals (Metazoa, ncbi_taxonomy_id:33208) [goid 7057] [evidence IDA]; The addition of tubulin heterodimers to one or both ends of a microtubule [goid 46785] [evidence IDA]; Any process that modulates the frequency, rate or extent of meiosis, the process by which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes [goid 40020] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C85305; Emi1; 2510044I10Rik; Fbxo31	C85305; Emi1; 2510044I10Rik; Fbxo31
Mus musculus	RefSeq	ILMN_218356	ILMN_218356	HGFAC	NM_019447.1	NM_019447.1		54426	9506778	NM_019447.1	Hgfac	NP_062320.1	ILMN_2994299	006560445	S	1906	TTATGTGGACTGGATCAACGACCGTATTCGACCGCCCAAGCGACCCGTGG	5	+	35390929-35390978	5qB2	Mus musculus hepatocyte growth factor activator (Hgfac), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	HGFA	HGFA
Mus musculus	RefSeq	ILMN_213461	ILMN_234246	DHPS	NM_001039514.1	NM_001039514.1		330817	87252719	NM_001039514.1	Dhps	NP_001034603.1	ILMN_2637241	002070687	S	879	GCGACTCATCAACACGCAGGCCATTTTCGCCAAGCGCTCTGGGATGATCA	8	+	87598296-87598345	8qC3	Mus musculus deoxyhypusine synthase (Dhps), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The posttranslational modification of peptidyl-lysine to form hypusine, N6-(4-amino-2-hydroxybutyl)-L-lysine [goid 8612] [evidence IEA]; The chemical reactions resulting in the breakdown of spermidine to form deoxyhypusine by the enzyme [eIF-5A]-deoxyhypusine synthase. The reaction occurs in four steps: 1. spermidine + NAD+ = dehydrospermidine + NADH + H+; 2. dehydrospermidine + [enzyme]-lysine = 1,3-diaminopropane + [enzyme]-lysine-N6=CH(CH2)3NH2; 3. [enzyme]-lysine-N6=CH(CH2)3NH2 = [eIF-5A]-lysine-N6=CH(CH2)3NH2; 4. [eIF-5A]-lysine-N6=CH(CH2)3NH2 + NADH + H+ = [eIF-5A]-deoxyhypusine + NAD+ [goid 50983] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: eIF5A-precursor]-lysine + spermidine = [eIF5A-precursor]-deoxyhypusine + propane-1,3-diamine. Four sub-reactions have been identified,in which the intermediates remain tightly associated with the enzyme: spermidine + NAD+ = dehydrospermidine + NADH; dehydrospermidine + [enzyme]-lysine = N-(4-aminobutylidene)-[enzyme]-lysine + propane-1,3-diamine; N-(4-aminobutylidene)-[enzyme]-lysine + [eIF5A-precursor]-lysine = N-(4-aminobutylidene)-[eIF5A-precursor]-lysine + [enzyme]-lysine; N-(4-aminobutylidene)-[eIF5A-precursor]-lysine + NADH + H+ = [eIF5A-precursor]-deoxyhypusine + NAD+ [goid 34038] [evidence IEA]	MGC74384; Dhs; MGC49129	MGC74384; Dhs; MGC49129
Mus musculus	RefSeq	ILMN_217363	ILMN_217363	PSORS1C2	NM_020576.1	NM_020576.1		57390	10181175	NM_020576.1	Psors1c2	NP_065601.1	ILMN_1236058	001190563	S	415	CCAAAGCCCACCTTTTTCATTGGCTGCCCGCTTAGAATCTCAATTTTCCC	17	+	35671232-35671281	17qB1	Mus musculus psoriasis susceptibility 1 candidate 2 (human) (Psors1c2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI448740; Pcg; SPR1	AI448740; Pcg; SPR1
Mus musculus	RefSeq	ILMN_195677	ILMN_231681	BCAS1	NM_029815.1	NM_029815.1		76960	30023813	NM_029815.1	Bcas1	NP_084091.1	ILMN_2662264	006560347	S	2788	GAGGGACTTGCTTCATCTGTTCGGTCTGACGCTTATCTCACGCCTGTCTG	2	-	170172726-170172775	2qH3	Mus musculus breast carcinoma amplified sequence 1 (Bcas1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]	2210416M21Rik; AI841227; NABC1; 9030223A09Rik	2210416M21Rik; AI841227; NABC1; 9030223A09Rik
Mus musculus	RefSeq	ILMN_212489	ILMN_212489	ITIH4	NM_018746.1	NM_018746.1		16427	9055251	NM_018746.1	Itih4	NP_061216.1	ILMN_2797276	005130056	S	2813	GCAGAGATTTCCTGCTGGACAGTGGAGATATAGAACTGTTAGGAGCGCCG	14	+	29730681-29730713:29730714-29730730	14qB	Mus musculus inter alpha-trypsin inhibitor, heavy chain 4 (Itih4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]	Itih-4	Itih-4
Mus musculus	RefSeq	ILMN_208641	ILMN_208641	GABRQ	NM_020488.1	NM_020488.1		57249	10048421	NM_020488.1	Gabrq	NP_065234.1	ILMN_2745173	004480348	S	1918	GGTTATACCATGTCTATTAGTTTCTCATACACCACAGCCGCGGAGATACT	X	+	70083801-70083820:70083821-70083850	XqA7.3	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit theta (Gabrq), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence ISS]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence ISS]		
Mus musculus	RefSeq	ILMN_213017	ILMN_213017	CAV1	NM_007616.3	NM_007616.3		12389	133893356	NM_007616.3	Cav1	NP_031642.1	ILMN_2632665	004610072	S	2320	GTGTTCCAAGACATGTCTGTTCTCCCTAGATACTCAGTTTTATACAAGTC	6	+	17291157-17291206	6qA2	Mus musculus caveolin 1, caveolae protein (Cav1), mRNA.	A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence TAS]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IPI]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence IMP]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45019] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics [goid 43627] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics [goid 43627] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus [goid 32570] [evidence ISO]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation [goid 1937] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions [goid 55074] [evidence IMP]; A homeostatic process involved in the maintenance of an internal equilibrium of nitric oxide within an organism or cell [goid 33484] [evidence IMP]; Any process that modulates the frequency, rate or extent of peptidase activity, the hydrolysis of peptide bonds within proteins [goid 52547] [evidence IMP]; Any process that activates, maintains or increases the rate activity of a metalloenzyme. A metalloenzyme is any enzyme that contains metal [goid 48554] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IMP]; The tissue remodeling that removes differentiated mammary epithelia during weaning [goid 60056] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the cytokine and chemokine mediated signaling pathway [goid 1960] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IMP]; Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of vasoconstriction [goid 45907] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; A decrease in the diameter of blood vessels, especially arteries, usually causing an increase in blood pressure [goid 42310] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the JAK-STAT signaling pathway activity [goid 46426] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell differentiation [goid 30857] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the JAK-STAT signaling pathway activity [goid 46426] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat5 protein [goid 42524] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat5 protein [goid 42524] [evidence IMP]	Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cav; Cav-1	Cav; Cav-1
Mus musculus	RefSeq	ILMN_198345	ILMN_198345	LOC240367	XM_140410.1	XM_140410.1			20880819	XM_140410.1	LOC240367		ILMN_1250545	004850458	S	13	CAAGGGCAGTCCTCATGTATACGCAGCACTGTGCACTGTAGCAGTCTCAG										
Mus musculus	RefSeq	ILMN_210818	ILMN_210818	ADAMTS2	NM_175643.2	NM_175643.2		216725	118130291	NM_175643.2	Adamts2	NP_783574.1	ILMN_1221851	002760148	S	3632	CGGCCAAGCCTGTATGTAAAGACAAGGAACCAAAGAATCCAGGAGCTCAT	11	+	50617442-50617491	11qB1.3	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2 (Adamts2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PCINP; ADAMTS-3; KIAA4060; mKIAA4060; 4732482M10; hPCPNI; A430089F14; ADAM-TS2	PCINP; ADAMTS-3; KIAA4060; mKIAA4060; 4732482M10; hPCPNI; A430089F14; ADAM-TS2
Mus musculus	RefSeq	ILMN_210818	ILMN_210818	ADAMTS2	NM_175643.2	NM_175643.2		216725	118130291	NM_175643.2	Adamts2	NP_783574.1	ILMN_1226259	007570563	S	3506	GAGGCTCCCCTCAATGTCTCTAGCACCAATGCCACTGAAGATCACCCAGA	11	+	50617316-50617365	11qB1.3	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2 (Adamts2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PCINP; ADAMTS-3; KIAA4060; mKIAA4060; 4732482M10; hPCPNI; A430089F14; ADAM-TS2	PCINP; ADAMTS-3; KIAA4060; mKIAA4060; 4732482M10; hPCPNI; A430089F14; ADAM-TS2
Mus musculus	RefSeq	ILMN_210818	ILMN_210818	ADAMTS2	NM_175643.2	NM_175643.2		216725	118130291	NM_175643.2	Adamts2	NP_783574.1	ILMN_2729103	006520273	S	3599	GAAGAGGTCCCGTCTCCTAACCTGATCCCTCGACGGCCAAGCCTGTATGT	11	+	50617409-50617458	11qB1.3	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2 (Adamts2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PCINP; ADAMTS-3; KIAA4060; mKIAA4060; 4732482M10; hPCPNI; A430089F14; ADAM-TS2	PCINP; ADAMTS-3; KIAA4060; mKIAA4060; 4732482M10; hPCPNI; A430089F14; ADAM-TS2
Mus musculus	RefSeq	ILMN_222992	ILMN_222992	BC031353	NM_153584.1	NM_153584.1		235493	23956381	NM_153584.1	BC031353	NP_705812.1	ILMN_2757807	000650619	S	3537	TTCCTAAGTGGACTGGAAGCACCCGTGTCGTCGCCCTTTTTGTACTGTTG	9	+	74879634-74879683	9qD	Mus musculus cDNA sequence BC031353 (BC031353), mRNA.				C130047D21Rik; AI553555; 6330415I01Rik; mKIAA1370; MGC41344; MGC38960	C130047D21Rik; AI553555; 6330415I01Rik; mKIAA1370; MGC41344; MGC38960
Mus musculus	RefSeq	ILMN_212004	ILMN_212004	GPR20	NM_173365.2	NM_173365.2		239530	142378498	NM_173365.2	Gpr20	NP_775541.1	ILMN_2621667	000050053	S	2071	CCCCAGACTCTGTGTGGCCACAGTCCTCTCCAGTGGTAGAAAATGTTAGG	15	-	73525057-73525106	15qD3	Mus musculus G protein-coupled receptor 20 (Gpr20), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	A430106B11Rik	A430106B11Rik
Mus musculus	Riken	ILMN_203578	ILMN_203578	A230069K02RIK	ri|A230069K02|PX00129I21|AK038867|1744					AK038867	A230069K02Rik		ILMN_2558378	004780497	S	859	GAGGAGGGGGCAAGTTTTAAGCAGAGACAAATGACGTTGGGGCTTGTGAG										
Mus musculus	Riken	ILMN_203004	ILMN_203004	5930429A15RIK	ri|5930429A15|PX00055H24|AK031203|3060					AK031203	5930429A15Rik		ILMN_2554000	005290364	S	2791	AAGACCGAGACCATGGGGTGGGAATAGGAGATGCTTTACCAAAGCCCAGG										
Mus musculus	RefSeq	ILMN_185240	ILMN_185240	USP1	NM_146144.2	NM_146144.2		230484	31981897	NM_146144.2	Usp1	NP_666256.2	ILMN_2781170	001450079	S	3256	AATAGTCATGAAGCCAAATCTCTGCGCTGTATCAGAGGCACAAAGTCTAG	4	+	98427240-98427289	4qC6	Mus musculus ubiquitin specific peptdiase 1 (Usp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC25559	MGC25559
Mus musculus	RefSeq	ILMN_185240	ILMN_185240	USP1	NM_146144.2	NM_146144.2		230484	31981897	NM_146144.2	Usp1	NP_666256.2	ILMN_1240950	001400605	S	17	ATGCCTGGCGTCATACCTAGTGAAAGTAATGGGCTTTCAAGAGGCAGTCC	4	+	98415844-98415893	4qC6	Mus musculus ubiquitin specific peptdiase 1 (Usp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC25559	MGC25559
Mus musculus	RefSeq	ILMN_196309	ILMN_229425	PTPRB	NM_029928.1	NM_029928.1		19263	23618913	NM_029928.1	Ptprb	NP_084204.1	ILMN_2591731	004880068	S	6124	TTAAGAATTCACCTGAAGATCCCCTGGATAAAAGCGTTTCACTGTGTGAC	10	+	115820938-115820987	10qD2	Mus musculus protein tyrosine phosphatase, receptor type, B (Ptprb), mRNA.			Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	3230402H02Rik; Ptpz; RPTPB; VE-PTP	3230402H02Rik; Ptpz; RPTPB; VE-PTP
Mus musculus	RefSeq	ILMN_226979	ILMN_226979	BLM	NM_001042527.1	NM_001042527.1		12144	110225359	NM_001042527.1	Blm	NP_001035992.1	ILMN_3072208	004570626	I	1	AGGAGGGCCGTGTCGGCGCGCGGAGTTTGGATGGTGGTTCCGCCCGGCGC	7	-	87679946-87679995	7qD3	Mus musculus Bloom syndrome homolog (human) (Blm), transcript variant 2, mRNA.	The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IGI]; Any process that inhibits or decreases the rate of DNA recombination during mitosis [goid 45950] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of an alpha-beta T cell [goid 46632] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IMP]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51098] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate; drives the unwinding of the DNA helix in the direction 3' to 5' [goid 43140] [evidence IDA]		
Mus musculus	RefSeq	ILMN_226979	ILMN_226979	BLM	NM_001042527.1	NM_001042527.1		12144	110225359	NM_001042527.1	Blm	NP_001035992.1	ILMN_3150996	005960189	A	4202	GATCCCGCTCGGCCTCATGTGCTTCTCAGGCAACATCATCAGCCAGTAGA	7	-	87600216-87600265	7qD3	Mus musculus Bloom syndrome homolog (human) (Blm), transcript variant 2, mRNA.	The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IGI]; Any process that inhibits or decreases the rate of DNA recombination during mitosis [goid 45950] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of an alpha-beta T cell [goid 46632] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IMP]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51098] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate; drives the unwinding of the DNA helix in the direction 3' to 5' [goid 43140] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212072	ILMN_310340	EG70793	XR_035158.1	XR_035158.1		70793	149258921	XR_035158.1	EG70793		ILMN_2622404	001820398	S	2083	GTCATAGTCTGAGACATGTTGCTTATGAAGACAATTCGAGGAAGTGCTAT	8	+	83539508-83539557	8qC2	PREDICTED: Mus musculus predicted gene, EG70793 (EG70793), misc RNA.					
Mus musculus	RefSeq	ILMN_215835	ILMN_215835	OLFR1514	NM_207576.1	NM_207576.1		404341	46430599	NM_207576.1	Olfr1514	NP_997459.1	ILMN_2664173	003450047	S	607	GCCGGCTTCAACCTTTTGAGCTGTACTCTCACCATCTTGATCTCCTACTT					Mus musculus olfactory receptor 1514 (Olfr1514), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR205-2	MOR205-2
Mus musculus	RefSeq	ILMN_215835	ILMN_215835	OLFR1514	NM_207576.1	NM_207576.1		404341	46430599	NM_207576.1	Olfr1514	NP_997459.1	ILMN_1240470	001430615	S	605	TGCCGGCTTCAACCTTTTGAGCTGTACTCTCACCATCTTGATCTCCTACT					Mus musculus olfactory receptor 1514 (Olfr1514), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR205-2	MOR205-2
Mus musculus	MEEBO	ILMN_220190	ILMN_220190	METTL2	scl40826.8.1_20	NM_172567.1			27369803	NM_172567.1	Mettl2		ILMN_2718854	000610193	S	1253	GTAGACAGCGGCTTGTTGATGATGGACAGTCTGGGGATTCAAGGAGCTCT								Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196552	ILMN_196552	1700012F10RIK	XM_181295.3	XM_181295.3			38091880	XM_181295.3	1700012F10Rik		ILMN_1255663	002120255	S	1005	CCATGGTGCACGCGTTAGGAGTCAGGCAGATGTCTCCTCCCACTGTGGTT										
Mus musculus	RefSeq	ILMN_200584	ILMN_229693	LOC665180	XM_975103.2	XM_975103.2		665180	149255062	XM_975103.2	LOC665180	XP_980197.2	ILMN_1235993	005340059	S	412	GACACCCTGCCCGGAGGACTGGCTGCTCTACGGAAGGAAATGCTACTACT	6	+	38626821-38626870	6qB1	PREDICTED: Mus musculus similar to CD69-like protein (LOC665180), mRNA.					
Mus musculus	RefSeq	ILMN_244905	ILMN_244905	OLFR138	NM_130868.1	NM_130868.1		170648	53828662	NM_130868.1	Olfr138	NP_570938.1	ILMN_2983316	001110424	S	791	CATCTATCACAAGGGACCAACCCAAGTTCATGGCTCTGTTTTATGCGGTG	17	+	38412508-38412557	17qB1	Mus musculus olfactory receptor 138 (Olfr138), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-40P; Olfr89; MGC129198; MGC157515; MGC129199	MOR256-40P; Olfr89; MGC129198; MGC157515; MGC129199
Mus musculus	RefSeq	ILMN_199115	ILMN_261061	LOC673578	XM_001005888.1	XM_001005888.1		673578	94419155	XM_001005888.1	LOC673578	XP_001005888.1	ILMN_1244101	007000398	S	102	AGCCTTTGCATGTCACAGTCATCTCCAACGTCATGTAACTACACATACTG					PREDICTED: Mus musculus similar to zinc finger protein 120 isoform 1 (LOC673578), mRNA.					
Mus musculus	Riken	ILMN_207085	ILMN_207085	NFATC2	ri|C130082H17|PX00666P17|AK081853|3311					AK081853	Nfatc2		ILMN_2584931	000270110	S	3177	TAGGGTGTTGTGGAGACTGGGGACCAGAGGCTACTCTGTCCTTCTCAGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISO]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_188921	ILMN_217892	1520402A15RIK	XM_204182.3	XM_204182.3		68075	94372210	XM_204182.3	1520402A15Rik	XP_204182.3	ILMN_1241455	000650520	S	438	TGCTGCAATGGCTCGTCAGTGTACCCCGCTCCTCCAGCAGCCAGCGCACT	4	-	115810272-115810321	4qD1	PREDICTED: Mus musculus RIKEN cDNA 1520402A15 gene (1520402A15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217892	ILMN_217892	1520402A15RIK	XM_204182.3	XM_204182.3		68075	94372210	XM_204182.3	1520402A15Rik	XP_204182.3	ILMN_1248601	003390653	S	542	CAGTGTCTCTATTGGCAGCTTCTTGGACACTGTGACCCCCAGAGAGCTGG	4	-	115810168-115810217	4qD1	PREDICTED: Mus musculus RIKEN cDNA 1520402A15 gene (1520402A15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216451	ILMN_243564	KRAS	NM_021284.4	NM_021284.4		16653	142374722	NM_021284.4	Kras	NP_067259.3	ILMN_2773211	006370541	S	1208	CGCGTCCAGCGTGTCCTAGACTTTATCATCTTTCAGAGGCGTAGGCAGAC	6	-	145168631-145168680	6qG3	Mus musculus v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog (Kras), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IGI]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IGI]; Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32228] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction [goid 35022] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IGI]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IGI]	Ki-ras; MGC7141; p21B; K-ras; Kras-2; ras; Kras2; AI929937	Ki-ras; MGC7141; p21B; K-ras; Kras-2; ras; Kras2; AI929937
Mus musculus	RefSeq	ILMN_218121	ILMN_243564	KRAS	NM_021284.4	NM_021284.4		16653	142374722	NM_021284.4	Kras	NP_067259.3	ILMN_1212703	001820088	S	4494	CCCTAGGTCAGCGCAACCAAAGGATGGAAAACAACTGGATCACACTGCAT	6	-	145165345-145165394	6qG3	Mus musculus v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog (Kras), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IGI]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IGI]; Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32228] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction [goid 35022] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IGI]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IGI]	Ki-ras; MGC7141; p21B; K-ras; Kras-2; ras; Kras2; AI929937	Ki-ras; MGC7141; p21B; K-ras; Kras-2; ras; Kras2; AI929937
Mus musculus	RefSeq	ILMN_201021	ILMN_201021	LOC384713	XM_357809.1	XM_357809.1			38087956	XM_357809.1	LOC384713		ILMN_1237517	002230669	S	524	TGGGAAGCAAGGTGGAGGTGAGCAAGACGGCCTACACTAGCCAAATCCCC										
Mus musculus	RefSeq	ILMN_217473	ILMN_217473	LEPROTL1	NM_026609.2	NM_026609.2		68192	31543118	NM_026609.2	Leprotl1	NP_080885.1	ILMN_1257244	004050039	S	2346	CGAAGTGCTGAGCGCTTGGCCATAGACTCCTTTCTAACAGCTGCATATTC	8	-	35198815-35198864	8qA4	Mus musculus leptin receptor overlapping transcript-like 1 (Leprotl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI854296; 1110067H13Rik; 1520402O14Rik	AI854296; 1110067H13Rik; 1520402O14Rik
Mus musculus	RefSeq	ILMN_197164	ILMN_197164	LOC214973	XM_122520.3	XM_122520.3			38074383	XM_122520.3	LOC214973		ILMN_1232493	003520608	S	640	TTCCCCAAAGATGGCGATGCCTTAAGTCGTGTGCTGAATATTGGTGCTTG										
Mus musculus	MEEBO	ILMN_193331	ILMN_193331	6330414G02RIK	scl6267.1.1_133						6330414G02Rik		ILMN_1250956	000150184	S	6	CTGCACAACCCTTGTCTTATCACTATGCCCCAGTGGTCTGCTACTTTAGG										
Mus musculus	RefSeq	ILMN_219016	ILMN_219016	AMBRA1	NM_172669.3	NM_172669.3		228361	124053444	NM_172669.3	Ambra1	NP_766257.3	ILMN_3048294	006040600	I	1199	GAGCGTCCCAGGACTTCCGCTTACATCAGACTCCGACAGCGGGTCAGTTA	2	+	91612667-91612716	2qE1	Mus musculus autophagy/beclin 1 regulator 1 (Ambra1), transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV021921; RP23-273F8.1; AA474864; mKIAA1736; Ambra1; A130023A14; 2310079H06Rik	AV021921; RP23-273F8.1; AA474864; mKIAA1736; Ambra1; A130023A14; 2310079H06Rik
Mus musculus	RefSeq	ILMN_219016	ILMN_219016	AMBRA1	NM_172669.3	NM_172669.3		228361	124053444	NM_172669.3	Ambra1	NP_766257.3	ILMN_3124160	000270730	A	5026	CAGGGCTGGAGGGAGGAGATTCCAGGTCAGAATGTGAGGTCTTGGTCTGT	2	+	91758742-91758791	2qE1	Mus musculus autophagy/beclin 1 regulator 1 (Ambra1), transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV021921; RP23-273F8.1; AA474864; mKIAA1736; Ambra1; A130023A14; 2310079H06Rik	AV021921; RP23-273F8.1; AA474864; mKIAA1736; Ambra1; A130023A14; 2310079H06Rik
Mus musculus	RefSeq	ILMN_219016	ILMN_219016	AMBRA1	NM_172669.3	NM_172669.3		228361	124053444	NM_172669.3	Ambra1	NP_766257.3	ILMN_1237642	005310707	S	2466	TATCCCGTTATGATGGAGCAGGATCCAGAGAGCACCCAATTTACCCAGAC	2	+	91645210-91645259	2qE1	Mus musculus autophagy/beclin 1 regulator 1 (Ambra1), transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV021921; RP23-273F8.1; AA474864; mKIAA1736; Ambra1; A130023A14; 2310079H06Rik	AV021921; RP23-273F8.1; AA474864; mKIAA1736; Ambra1; A130023A14; 2310079H06Rik
Mus musculus	MEEBO	ILMN_223946	ILMN_223946	2410016O06RIK	scl42993.1.28_269				12963762	NM_023633	2410016O06Rik		ILMN_2772027	000670112	S	2202	CGGGGCTGAGCTGGGGTCAGTGTGCTGCGCGTTAAGTTTGTATGAACGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; Any complex of pre-rRNAs, ribosomal proteins, and associated proteins formed in the nucleolus during ribosome biogenesis [goid 30685] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]		
Mus musculus	RefSeq	ILMN_223453	ILMN_223453	DUSP14	NM_019819.3	NM_019819.3		56405	142360089	NM_019819.3	Dusp14	NP_062793.2	ILMN_2764309	006380376	S	980	GGGTGTTCGGGTTTAAGAGATGGGGAGGGGAAATACGTGCGTTGCCTGTG	11	-	83861960-83862009	11qC	Mus musculus dual specificity phosphatase 14 (Dusp14), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	D11Ertd395e; MKP-L; Mkp6; 2310042C07Rik; 1110014C10Rik	D11Ertd395e; MKP-L; Mkp6; 2310042C07Rik; 1110014C10Rik
Mus musculus	MEEBO	ILMN_189310	ILMN_189310	SCL000349.1_0	scl000349.1_0	U92127.1			2894854	U92127.1	scl000349.1_0		ILMN_2460154	000580630	S	7	TCACTGTGAGCAACATGGGCTACAAACTTACCTTCGGGACAGGAACAAGC										
Mus musculus	MEEBO	ILMN_188896	ILMN_188896	B930008F14RIK	scl54619.1.622_125						B930008F14Rik		ILMN_2456642	005690494	S	20	GCTGAAACAAGAGGGATATATATTAGAGACAAGTCTACATGTCATCGCCA										
Mus musculus	RefSeq	ILMN_209633	ILMN_256004	1700061J05RIK	XM_911673.3	XM_911673.3		73376	149266971	XM_911673.3	1700061J05Rik	XP_916766.2	ILMN_1245666	006040136	S	969	CGGAGAGAAGAGCAGATCCAAGGCCAAGTAGTTGAAAGGACATTGGGAGG				15qE1	PREDICTED: Mus musculus RIKEN cDNA 1700061J05 gene, transcript variant 1 (1700061J05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196123	ILMN_261458	SARS	NM_011319.2	NM_011319.2		20226	141801897	NM_011319.2	Sars	NP_035449.1	ILMN_2712900	000990066	S	1315	CTCTACACAGAACAAGTTGAAGGCAATGTCTTCCCTCTTTTCGCCCAAGA	3	-	108230780-108230829	3qF3	Mus musculus seryl-aminoacyl-tRNA synthetase (Sars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6434] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-serine + tRNA(Ser) = AMP + diphosphate + L-seryl-tRNA(Ser) [goid 4828] [evidence IEA]	C78314; Sars1; Strs	C78314; Sars1; Strs
Mus musculus	Riken	ILMN_201811	ILMN_201811	CENPH	ri|2610042E16|ZX00060P18|AK011739|902					AK011739	Cenph		ILMN_2544775	002320164	S	663	CAAGCTAAGAAAAGCAGCGTCTGGTGTATGCGTAGCAAGAGCCATACAGC						A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence ISA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 51383] [evidence TAS]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence ISA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence ISA]	Interacting selectively with a kinetochore, a proteinaceous structure on a condensed chromosome, beside the centromere, to which the spindle fibers are attached [goid 43515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]		
Mus musculus	RefSeq	ILMN_211985	ILMN_260465	CLEC7A	NM_020008.1	NM_020008.1		56644	9910159	NM_020008.1	Clec7a	NP_064392.1	ILMN_2653132	001450333	S	2183	GTGCTGAGTCCACTGAATTGTTCTCTTGAAAATGATTGGGTTTATGTCAC	6	-	129411648-129411697	6qF3	Mus musculus C-type lectin domain family 7, member a (Clec7a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species [goid 1878] [evidence IDA]; The series of events in which a stimulus from a yeast is received and converted into a molecular signal [goid 1879] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IDA]; Any series of molecular signals generated as a consequence of binding to a cell surface pattern recognition receptor (PRR). Such receptors bind for molecular patterns based on a repeating or polymeric structures, like those of polysaccharides or peptidoglycans, which are sometimes associated with potential pathogens [goid 2752] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octomer oligosaccharide [goid 2238] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence IDA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IDA]	Interacting selectively with an opsonin, such as a complement component or antibody, deposited on the surface of a bacteria, virus, immune complex, or other particulate material [goid 1846] [evidence IDA]; Interacting selectively with zymosan [goid 1872] [evidence IDA]; Combining with zymosan to initiate a change in cell activity [goid 1874] [evidence IDA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any polysaccharide [goid 30247] [evidence IDA]	BGR; beta-GR; Clecsf12	BGR; beta-GR; Clecsf12
Mus musculus	RefSeq	ILMN_196953	ILMN_196953	LOC380763	XM_358419.1	XM_358419.1			38050409	XM_358419.1	LOC380763		ILMN_1249217	002480474	S	730	CCTCCCACCGCACCTGGGCGAAGGCCAAATAATCAAAAGAAGGAAACAGG										
Mus musculus	RefSeq	ILMN_191787	ILMN_253493	VPS37A	NM_033560.3	NM_033560.3		52348	111955226	NM_033560.3	Vps37a	NP_291038.2	ILMN_1244133	006560279	S	1856	GCCTCATTTATCAAGAGTGCTTATTACTTAGATTCTTCTTCCTGTCAGCC	8	+	41631965-41632014	8qA4	Mus musculus vacuolar protein sorting 37A (yeast) (Vps37a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		AW261445; D8Ertd531e; 2210018P21Rik; 4930592A21Rik	AW261445; D8Ertd531e; 2210018P21Rik; 4930592A21Rik
Mus musculus	RefSeq	ILMN_221641	ILMN_221641	BC057893	NM_173033.3	NM_173033.3		272027	144922727	NM_173033.3	BC057893	NP_766621.3	ILMN_2738284	001780554	S	3606	GCAGCTTTAATCTTGATGTCAAAGTTTCAAGTGGGGGTTGACAGATCATG	4	-	46127688-46127737	4qB1	Mus musculus cDNA sequence BC057893 (BC057893), mRNA.				3010020C06	3010020C06
Mus musculus	RefSeq	ILMN_198906	ILMN_243392	CES7	NM_001003951.1	NM_001003951.1		67935	51556220	NM_001003951.1	Ces7	NP_001003951.1	ILMN_1244827	001660500	S	1174	GGCAAGCATTCTCCGACCGACATCCGAGACACTTTACTGGACTTGTTTGG	8	-	96038144-96038193	8qC5	Mus musculus carboxylesterase 7 (Ces7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1700081L16Rik; cauxin; BB081581; Gm503; 1700122C07Rik	1700081L16Rik; cauxin; BB081581; Gm503; 1700122C07Rik
Mus musculus	RefSeq	ILMN_208725	ILMN_208725	APIP	NM_019735.3	NM_019735.3		56369	141803057	NM_019735.3	Apip	NP_062709.2	ILMN_1234781	004810167	S	812	CCCAGTTGGAGAAAATGGAATTGTGTAAGCCAAGTGGATGCCTAAGCATC	2	+	102932694-102932721:102932722-102932743	2qE2	Mus musculus APAF1 interacting protein (Apip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	APIP2; Mmrp19; CGI-29	APIP2; Mmrp19; CGI-29
Mus musculus	RefSeq	ILMN_208725	ILMN_208725	APIP	NM_019735.3	NM_019735.3		56369	141803057	NM_019735.3	Apip	NP_062709.2	ILMN_1244908	002750446	S	170	CAAGGAGCACCCCCGATTCCTGATCCCAGAACTTTGCAAACAGTTTTACC	2	+	102923114-102923163	2qE2	Mus musculus APAF1 interacting protein (Apip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	APIP2; Mmrp19; CGI-29	APIP2; Mmrp19; CGI-29
Mus musculus	MEEBO	ILMN_191051	ILMN_191051	4930517O19RIK	scl46024.5.1_47						4930517O19Rik		ILMN_2475647	002120390	S	18	CACTAGTAGCCTGTGTTTTCAAGTTGTTACGTAGATTCTTCGTCATCCAC										
Mus musculus	RefSeq	ILMN_214284	ILMN_214284	LMAN1L	NM_199222.2	NM_199222.2		235416	142351955	NM_199222.2	Lman1l	NP_954692.1	ILMN_1212980	003890220	S	1182	GGAGCACACGTCTTCTACCTGCCTGTGGGCACTAAGCATCACTTTTTTGA	9	-	57457017-57457032:57457033-57457066	9qB	Mus musculus lectin, mannose-binding 1 like (Lman1l), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	BC020188; MGC28923; slamp	BC020188; MGC28923; slamp
Mus musculus	RefSeq	ILMN_184789	ILMN_216560	FAM132B	NM_173395.2	NM_173395.2		227358	124248543	NM_173395.2	Fam132b	NP_775571.2	ILMN_2421580	000020291	S	2510	TTCTGCCTAGCAATATGACACAATAAATACTTTTAAGTTGCTGTGTAACA	1	+	93270489-93270538	1qD	Mus musculus family with sequence similarity 132, member B (Fam132b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			4832406C22	4832406C22
Mus musculus	RefSeq	ILMN_216560	ILMN_216560	FAM132B	NM_173395.2	NM_173395.2		227358	124248543	NM_173395.2	Fam132b	NP_775571.2	ILMN_2672509	004570376	S	2381	GTGGGCACAGACATGTCAGTGACGTTATCTTCTACCCTTGAGAAAGCCAC	1	+	93270360-93270409	1qD	Mus musculus family with sequence similarity 132, member B (Fam132b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			4832406C22	4832406C22
Mus musculus	RefSeq	ILMN_200879	ILMN_242774	TMEM29	XM_898013.2	XM_898013.2		382245	94408377	XM_898013.2	Tmem29	XP_903106.1	ILMN_1240911	002470326	S	351	CCTGGGTTCTCCCAAGAGGAGGATTATGAAGTGTGCCAAGACCAAGATCC	X	-	146843982-146844031	XqF3	PREDICTED: Mus musculus transmembrane protein 29, transcript variant 2 (Tmem29), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_219453	ILMN_219453	SPC25	NM_025565.1	NM_025565.1		66442	21313453	NM_025565.1	Spc25	NP_079841.1	ILMN_2901180	006620184	S	740	ATCATCCCAAACCATGCCTCTTTGAGGTAACATTTGTGAGCTGAAAACAG	2	-	68995106-68995155	2qC2	Mus musculus SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) (Spc25), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		2610205L13Rik; Spbc25; 2600017H08Rik	2610205L13Rik; Spbc25; 2600017H08Rik
Mus musculus	RefSeq	ILMN_220476	ILMN_220476	1700011K15RIK	NM_029294.1	NM_029294.1		75456	30794181	NM_029294.1	1700011K15Rik	NP_083570.1	ILMN_2925214	001190463	S	1523	AGTGTTCTTTGAGAAAGAAGACCCTGACTGTCTCTATTTGAGGACTCATC	12	+	35571355-35571404	12qA3	Mus musculus RIKEN cDNA 1700011K15 gene (1700011K15Rik), mRNA.				MGC130375	MGC130375
Mus musculus	RefSeq	ILMN_211343	ILMN_211343	6720458F09RIK	NM_177374.2	NM_177374.2		328162	31340787	NM_177374.2	6720458F09Rik	NP_796348.1	ILMN_2614853	007650240	S	2313	CGCGAGACTCACCAGTGTCCTACTGTCATATGTCATACCCGAGGGCACCC	12	+	112131628-112131677	12qF1	Mus musculus RIKEN cDNA 6720458F09 gene (6720458F09Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methyladenine [goid 16429] [evidence IEA]	AI606093	AI606093
Mus musculus	MEEBO	ILMN_209030	ILMN_209030	2610510B01RIK	scl48851.29.1_19	XM_354972.1			38080130	XM_354972.1	2610510B01Rik		ILMN_1217562	005220386	S	536	ATGCCGCCATGTCGGTCCGGCCCGTGCTGCTTGGCCTGTATGAGAAGTAC										
Mus musculus	Riken	ILMN_202868	ILMN_202868	4933406C08RIK	ri|4933406C08|PX00019B14|AK030159|1499					AK030159	4933406C08Rik		ILMN_1231243	000730711	S	664	CTTCTTCCACTGAGAACCCACAACGCGTCACAGGATCATGGGGAGGCAGG										
Mus musculus	RefSeq	ILMN_209508	ILMN_242153	VPS13B	XM_981774.2	XM_981774.2		666173	149266521	XM_981774.2	Vps13b	XP_986868.1	ILMN_2653402	002320082	S	8516	CGAACTGACAGAGCTGTGTGTGAAGGCTAAGGGAGACGAGGACTGGTCAA				15qB3.1	PREDICTED: Mus musculus vacuolar protein sorting 13B (yeast), transcript variant 5 (Vps13b), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_187293	ILMN_242153	VPS13B	XM_981774.2	XM_981774.2		666173	149266521	XM_981774.2	Vps13b	XP_986868.1	ILMN_1253379	003830711	S	963	AGAACTCGCCTGCATTTTACATATGATAACCTAAATTCCAAGATGCCATC				15qB3.1	PREDICTED: Mus musculus vacuolar protein sorting 13B (yeast), transcript variant 5 (Vps13b), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_209508	ILMN_242153	VPS13B	XM_981774.2	XM_981774.2		666173	149266521	XM_981774.2	Vps13b	XP_986868.1	ILMN_1237530	004040082	S	13107	CCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAAC				15qB3.1	PREDICTED: Mus musculus vacuolar protein sorting 13B (yeast), transcript variant 5 (Vps13b), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_197636	ILMN_242153	VPS13B	XM_981774.2	XM_981774.2		666173	149266521	XM_981774.2	Vps13b	XP_986868.1	ILMN_1241793	004670300	S	5932	CGCTTGAAAGCCTCCATGCATCCACAAGGTCATCTGCCAGACAAGCCCTC				15qB3.1	PREDICTED: Mus musculus vacuolar protein sorting 13B (yeast), transcript variant 5 (Vps13b), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	Riken	ILMN_203952	ILMN_203952	GALGT1	ri|A430087B14|PX00138G16|AK040324|1421					AK040324	Galgt1		ILMN_1254588	004540170	S	1229	GCGTGCCTCAGCCAACAGCTTCCAGGGTGCTGATTAAGGACCACTTCCCT										
Mus musculus	RefSeq	ILMN_184168	ILMN_251330	ROR1	NM_013845.4	NM_013845.4		26563	146149318	NM_013845.4	Ror1	NP_038873.2	ILMN_1212823	004070491	S	3167	CTCAAAACAATCGTCTTTGCTTGGGGACTCCCATATCCATGGGCACACCG				4qC6	Mus musculus receptor tyrosine kinase-like orphan receptor 1 (Ror1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence TAS]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Ntrkr1; mRor1; 2810404D04Rik	Ntrkr1; mRor1; 2810404D04Rik
Mus musculus	RefSeq	ILMN_196426	ILMN_212057	DUOX2	NM_177610.2	NM_177610.2		214593	125628639	NM_177610.2	Duox2	NP_808278.2	ILMN_1232284	005910451	S	4421	TCCATCCACAGGTACGTAAGATTGGAGTCTTCAGCTGTGGTCCTCCAGGG	2	-	122106256-122106295:122106427-122106436	2qE5	Mus musculus dual oxidase 2 (Duox2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process by which the anatomical structures of the adenohypophysis are generated and organized. Morphogenesis pertains to the creation of form. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 48855] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	P138-TOX; NOXEF2; A430065P05Rik; LNOX2; THOX2	P138-TOX; NOXEF2; A430065P05Rik; LNOX2; THOX2
Mus musculus	RefSeq	ILMN_221562	ILMN_221562	1700127D06RIK	NM_029831.1	NM_029831.1		76999	21735478	NM_029831.1	1700127D06Rik	NP_084107.1	ILMN_2855371	007330014	S	64	GCTTTACCTCAGGCTGGAGCACCATGGCACCCTACCAGTTCCAAAATGCA	7	+	43813117-43813137:43813138-43813153:43813250-43813262		Mus musculus RIKEN cDNA 1700127D06 gene (1700127D06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199986	ILMN_199986	LOC384155	XM_357452.1	XM_357452.1			38079569	XM_357452.1	LOC384155		ILMN_2537186	005560653	S	424	TGTGTTCTCTTGCTGACCAGACACAGCATTGCATGGAGAAGGCGCTGCGA										
Mus musculus	RefSeq	ILMN_216649	ILMN_216649	VTCN1	NM_178594.2	NM_178594.2		242122	31341500	NM_178594.2	Vtcn1	NP_848709.1	ILMN_2673621	003440253	S	1090	CCCCCGATCGGAACAAGATGGACCTAGAAAATAATTCAACCAAACTAGAG	3	+	100699363-100699412	3qF2.2	Mus musculus V-set domain containing T cell activation inhibitor 1 (Vtcn1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell activation [goid 50868] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IGI]	B7h4; B7-H4; MGC41287; BC032925; B7x; B7S1	B7h4; B7-H4; MGC41287; BC032925; B7x; B7S1
Mus musculus	Riken	ILMN_202265	ILMN_202265	1700015F03RIK	ri|1700015F03|ZX00050B07|AK005991|1251					AK005991	1700015F03Rik		ILMN_1254642	002650243	S	957	GATCCATGTGGTTGATGAGCACACTGGCCATGAACGTCCTGTTTCATCTT										
Mus musculus	Riken	ILMN_206342	ILMN_206342	D330034M21RIK	ri|D330034M21|PX00192M02|AK084708|3849					AK084708	D330034M21Rik		ILMN_1226222	002570753	S	3042	GGCATGCACCCCGTCTGGTCCAATGTGTGAGGATCATTGTGGCTACACTT										
Mus musculus	RefSeq	ILMN_200109	ILMN_200109	LOC384206	XM_357488.1	XM_357488.1			38080405	XM_357488.1	LOC384206		ILMN_2537626	006270343	S	1172	CTGTCACTGCTGTCGTTGGCCAGACTTCCTATCCTTTTGACACGGTTCGC										
Mus musculus	RefSeq	ILMN_211752	ILMN_211752	LAO1	NM_133892.3	NM_133892.3		100470	31981607	NM_133892.3	Lao1	NP_598653.2	ILMN_2873068	001030646	S	1947	AGGCTGCAGTGGACAAGGAGGCCACTCGAGGACATACGGCTCTTTAGAGG	4	+	118641115-118641161:118641162-118641164	4qD2.1	Mus musculus L-amino acid oxidase 1 (Lao1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents [goid 9063] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: a L-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 1716] [evidence IDA]	AW990848	AW990848
Mus musculus	RefSeq	ILMN_211752	ILMN_211752	LAO1	NM_133892.3	NM_133892.3		100470	31981607	NM_133892.3	Lao1	NP_598653.2	ILMN_2873070	007550187	S	2065	TAAATAGGCTAGAAGATGAAAGGAAGCCGAGACCCAGGAGAGAAGTCACC	4	+	118641233-118641282	4qD2.1	Mus musculus L-amino acid oxidase 1 (Lao1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents [goid 9063] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: a L-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 1716] [evidence IDA]	AW990848	AW990848
Mus musculus	MEEBO	ILMN_193297	ILMN_193297	SCL0002617.1_582	scl0002617.1_582	AK008866.1			12843317	AK008866.1	scl0002617.1_582		ILMN_2495888	001440072	S	20	TGGACTTGCACTTGGGAATCAGGTTCTGCTCACTTGGACATCCCTGCATC										
Mus musculus	Riken	ILMN_205825	ILMN_205825	A530076E23RIK	ri|A530076E23|PX00141J16|AK041063|2548					AK041063	A530076E23Rik		ILMN_1239129	002850091	S	2452	CCAGCACTTGGGAGGTAGAGGGCAGGAGGACCAGGGGTTTAAGTCTAGTT										
Mus musculus	MEEBO	ILMN_215841	ILMN_215841	E230002P03RIK	scl22283.1_27	NM_177141.2			31342898	NM_177141.2	E230002P03Rik		ILMN_2664253	004640605	S	1657	CTTCAGTTTGTATCTATCTGATACCCATCTACTGGTTCCCGGATGCTGGG										
Mus musculus	RefSeq	ILMN_189795	ILMN_251061	V1RD12	NM_206872.1	NM_206872.1		384572	46047413	NM_206872.1	V1rd12	NP_996755.1	ILMN_2481009	003370372	S	767	GCTTTATTCTTCACATTGTTTTTGTAGACTCCCATCTGTGGTTGAGGCAT	7	-	24650652-24650701	7qA3	Mus musculus vomeronasal 1 receptor, D12 (V1rd12), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_206947	ILMN_206947	ST14	ri|D630022P10|PX00197J01|AK085410|2689					AK085410	St14		ILMN_2583891	003610767	S	2392	GACTGAGTGTCCCGTATCTAAAATGCCTGGGACTAGAAGTATGGCCGACC						Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IDA]		
Mus musculus	RefSeq	ILMN_200566	ILMN_200566	LOC383349	XM_356999.1	XM_356999.1			38083786	XM_356999.1	LOC383349		ILMN_1234923	000730609	S	177	CCTAGGTTCCTTGGGTGTCCTGCCCACAGAGGAGGACGAAGAGGATAAGT										
Mus musculus	MEEBO	ILMN_223479	ILMN_223479	CYP4X1	scl23972.12.1_107	XM_289695.1			28500133	XM_289695.1	Cyp4x1		ILMN_2764597	003400241	S	3911	TTTCTGTTTGTTTTTTATTGTTTTTGGAATTATACAAATAACAGGATTTG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214912	ILMN_214912	TMEM150	NM_144916.1	NM_144916.1		232086	21450310	NM_144916.1	Tmem150	NP_659165.1	ILMN_2653395	003930154	S	695	TGGCTATGGCCTACCTTCGAAGTGTGCTGGCTGTCATCGCCTTCATCACC	6	+	72288207-72288256	6qC1	Mus musculus transmembrane protein 150 (Tmem150), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]			MGC25977; MGC37802; BC014685	MGC25977; MGC37802; BC014685
Mus musculus	RefSeq	ILMN_214912	ILMN_214912	TMEM150	NM_144916.1	NM_144916.1		232086	21450310	NM_144916.1	Tmem150	NP_659165.1	ILMN_2861123	002140678	S	1412	CACTCTGCCCCTCACTTCCTTTAGGGCAAATAACACAGCAGAACCACACG	6	+	72289173-72289222	6qC1	Mus musculus transmembrane protein 150 (Tmem150), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]			MGC25977; MGC37802; BC014685	MGC25977; MGC37802; BC014685
Mus musculus	RefSeq	ILMN_223308	ILMN_223308	EIF2B2	NM_145445.3	NM_145445.3		217715	141802053	NM_145445.3	Eif2b2	NP_663420.1	ILMN_2762301	005810725	S	1106	CACGGCCTGCCCTATGCGGACCCAGAGTGGAGTGGAGACACAGCATTGCT	12	+	86567111-86567160	12qD2	Mus musculus eukaryotic translation initiation factor 2B, subunit 2 beta (Eif2b2), mRNA.	A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISO]	C85417; AA409345; EIF-2Bbeta; EIF2B	C85417; AA409345; EIF-2Bbeta; EIF2B
Mus musculus	RefSeq	ILMN_245347	ILMN_245347	RBMS2	NM_019711.2	NM_019711.2		56516	84872202	NM_019711.2	Rbms2	NP_062685.2	ILMN_3061923	003850131	I	156	GCTGCTATCAGTGACTTCCAGGCCTGGGATTTCGACTTTTGGCTATAACA	10	-	127613419-127613468	10qD3	Mus musculus RNA binding motif, single stranded interacting protein 2 (Rbms2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2610315E04Rik; Scr3	2610315E04Rik; Scr3
Mus musculus	RefSeq	ILMN_188121	ILMN_316853	LOC100040233	XM_001474605.1	XM_001474605.1		100040233	149255073	XM_001474605.1	LOC100040233	XP_001474655.1	ILMN_2449956	004880156	S	432	CCTGCTGGCACTCAGTGTCTCATCTCTGGCTGGGGCAACACTCTTAGCTT	6	-	41393340-41393389	6qB1	PREDICTED: Mus musculus similar to trypsinogen 15 (LOC100040233), mRNA.					
Mus musculus	MEEBO	ILMN_224052	ILMN_224052	BC022651	scl31805.6.1_1				31342748	NM_177887	BC022651		ILMN_1216491	005090022	S	2731	GGCTGCAACCCTAGCCTAAGCAGAAATTGGCACGCTGAAAGTACTCAAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_197233	ILMN_241817	PCDH24	NM_001033364.2	NM_001033364.2		268663	142372214	NM_001033364.2	Pcdh24	NP_001028536.1	ILMN_1234339	005670092	S	3679	GGCTGGCAAGGAGGCCCGAAAGACACCAATAGAGACGACAGCTCCAACTG	13	+	54836064-54836113	13qB1	Mus musculus protocadherin 24 (Pcdh24), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	PC-LKC; Gm624	PC-LKC; Gm624
Mus musculus	RefSeq	ILMN_219859	ILMN_219859	ZBTB39	NM_198035.1	NM_198035.1		320080	37574146	NM_198035.1	Zbtb39	NP_932152.1	ILMN_1245131	003180070	S	5701	CCTGCCCGGAGTAGCTCAAGTCTCTTCTGAAGCAGAGAAACGTTGCTGTC	10	+	127184146-127184195	10qD3	Mus musculus zinc finger and BTB domain containing 39 (Zbtb39), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mKIAA0352; 7030401O21Rik	mKIAA0352; 7030401O21Rik
Mus musculus	MEEBO	ILMN_223912	ILMN_223912	CD52	scl023833.2_2				14719423	NM_013706	Cd52		ILMN_2771380	001170181	S	38	TCATCTCTCAAAGCTGCTACAGAGCCCAGGAAGATTTCAGGATGAAGAGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]				
Mus musculus	RefSeq	ILMN_201423	ILMN_233219	SERPINA11	XM_001003880.1	XM_001003880.1		380780	94420369	XM_001003880.1	Serpina11	XP_001003880.1	ILMN_1241100	003870746	S	32	CCTCAGCCAAGTGCAAGCATCCCTTTGATCGCTACCAGACCCGGAAGCAG				12qE	PREDICTED: Mus musculus serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11 (Serpina11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	Riken	ILMN_207323	ILMN_207323	EPIM	ri|4930481E07|PX00639J10|AK076816|719					AK076816	Epim		ILMN_1229499	001010239	S	295	CACGCCACTGTTTGTGGCCTCGCTTCCCTGTTAGAAGCCTGTCACTGTGT										
Mus musculus	MEEBO	ILMN_185632	ILMN_185632	HDAC3	scl51496.12_24				7110620	NM_010411	Hdac3		ILMN_1221310	005570603	S	3	GCAGTTGGAAGGTTGGAAACAGGAGATAAAGGCCAGATGTAGGAGACAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]		
Mus musculus	RefSeq	ILMN_218427	ILMN_218427	TCEAL1	NM_146236.1	NM_146236.1		237052	22122806	NM_146236.1	Tceal1	NP_666348.1	ILMN_2937136	000840762	S	657	CAGGTTGTGCAGTTTTATTTCAAGTGTTTGACATGTAACTGGCACGGGTC	X	+	133243954-133244003	XqF1	Mus musculus transcription elongation factor A (SII)-like 1 (Tceal1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	P21; MGC18752; BC011290; SIIR; pp21; MGC102312; 0610011M09Rik	P21; MGC18752; BC011290; SIIR; pp21; MGC102312; 0610011M09Rik
Mus musculus	RefSeq	ILMN_218427	ILMN_218427	TCEAL1	NM_146236.1	NM_146236.1		237052	22122806	NM_146236.1	Tceal1	NP_666348.1	ILMN_2695731	004570468	S	495	CAAACTGATGATAATGCATTGGAAGGCAAAACGGAGCCGCCCTTACCCTA	X	+	133243792-133243841	XqF1	Mus musculus transcription elongation factor A (SII)-like 1 (Tceal1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	P21; MGC18752; BC011290; SIIR; pp21; MGC102312; 0610011M09Rik	P21; MGC18752; BC011290; SIIR; pp21; MGC102312; 0610011M09Rik
Mus musculus	RefSeq	ILMN_237580	ILMN_237580	HBP1	NM_153198.1	NM_153198.1		73389	23397422	NM_153198.1	Hbp1	NP_694878.1	ILMN_3020240	005360689	I	2392	CTGCAGTGCACCACTTGCACTTTACTCCCTCCGGCTTCTGAGACAGAGCA	12	-	32611507-32611556	12qA3	Mus musculus high mobility group box transcription factor 1 (Hbp1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700058O05Rik; BE629963; C86454; C330012F01Rik	1700058O05Rik; BE629963; C86454; C330012F01Rik
Mus musculus	RefSeq	ILMN_237580	ILMN_237580	HBP1	NM_153198.1	NM_153198.1		73389	23397422	NM_153198.1	Hbp1	NP_694878.1	ILMN_3092415	006760739	A	1159	TATGGCTCGTCAGCGCCGTGCATCTCTGTCTTGTGGAGGAGGACCTGGTA	12	-	32615772-32615821	12qA3	Mus musculus high mobility group box transcription factor 1 (Hbp1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700058O05Rik; BE629963; C86454; C330012F01Rik	1700058O05Rik; BE629963; C86454; C330012F01Rik
Mus musculus	RefSeq	ILMN_214950	ILMN_214950	SPZ1	NM_030237.2	NM_030237.2		79401	31982611	NM_030237.2	Spz1	NP_084513.2	ILMN_2653834	002370291	S	1348	CGCCAGAAGCAGATACAACTTGAGACAAAACTGTCATCAACCCAGGGTAG	13	-	93344730-93344779	13qC3	Mus musculus spermatogenic leucine zipper 1 (Spz1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	1700027M20Rik; AI429130	1700027M20Rik; AI429130
Mus musculus	RefSeq	ILMN_199165	ILMN_199165	LOC327992	XM_282974.2	XM_282974.2			38091543	XM_282974.2	LOC327992		ILMN_2534278	005270528	S	2096	CTGAACCCACGTCCTGTTTGAAGAGCAAGGCATCCGGACTTGGCCCATCC										
Mus musculus	MEEBO	ILMN_212950	ILMN_212950	M6PR	scl017113.8_48	NM_010749.4			34328544	NM_010749.4	M6pr		ILMN_1243241	002230717	S	9931	GACGTTTGTGCTAAGGAGACACAGCAGAATGCAGTAAGACAATGGAGGCC						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A vacuole that is maintained at an acidic pH and which contains degradative enzymes, including a wide variety of acid hydrolases [goid 323] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mannose into, out of, within or between cells. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 15761] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of mannose from one side of the membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 15578] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IEA]		
Mus musculus	MEEBO	ILMN_212950	ILMN_212950	M6PR	scl017113.8_48	NM_010749.4			34328544	NM_010749.4	M6pr		ILMN_2658219	002680577	S	7331	GGGGTGATGAATATGACAACCACTGTGGCAAAGAGCAGCGCCGTGCAGTG						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A vacuole that is maintained at an acidic pH and which contains degradative enzymes, including a wide variety of acid hydrolases [goid 323] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mannose into, out of, within or between cells. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 15761] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of mannose from one side of the membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 15578] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208746	ILMN_208746	SRA1	NM_025291.1	NM_025291.1		24068	13384639	NM_025291.1	Sra1	NP_079567.1	ILMN_2876554	000360411	S	635	TTTACAGTGGAACCTGAGAACCAGACAATACCAGGCTTCCAACAGCCATC	18	-	36793429-36793478	18qB2	Mus musculus steroid receptor RNA activator 1 (Sra1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A protein complex consisting of a steroid receptor associated with nonreceptor proteins, minimally a dimer of Hsp90 and a monomer of hsp56/FKBP59; forms in the absence of bound ligand [goid 5831] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; The area of a motile cell closest to the direction of movement [goid 31252] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA];  [goid 30374] [evidence IDA]	SRA; STRAA1; AA959952; Strra1	SRA; STRAA1; AA959952; Strra1
Mus musculus	RefSeq	ILMN_201677	ILMN_316078	LOC100040243	XM_001474366.1	XM_001474366.1		100040243	149263902	XM_001474366.1	LOC100040243	XP_001474416.1	ILMN_1239776	006650110	S	443	CTGAGGCCCAGAGAGGTGAGGTAGGAATTTTGATCCAGTACCCTGGAGAC	13	+	14154807-14154856	13qA1	PREDICTED: Mus musculus hypothetical protein LOC100040243 (LOC100040243), mRNA.					
Mus musculus	RefSeq	ILMN_220125	ILMN_220125	PTGS2	NM_011198.3	NM_011198.3		19225	118130137	NM_011198.3	Ptgs2	NP_035328.2	ILMN_2717913	003830202	S	2199	AAGGAAAAATGTATGAATATGTGAGTGTTGTTACAAGATGAAAAATGCTG	1	+	151953196-151953245	1qG1	Mus musculus prostaglandin-endoperoxide synthase 2 (Ptgs2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IGI]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence ISO]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O [goid 4666] [evidence IEA]	PHS-2; Pghs2; PGHS-2; Cox-2; COX2; TIS10	PHS-2; Pghs2; PGHS-2; Cox-2; COX2; TIS10
Mus musculus	RefSeq	ILMN_188301	ILMN_219957	SCN3A	NM_018732.2	NM_018732.2		20269	125630312	NM_018732.2	Scn3a	NP_061202.2	ILMN_1218700	007150142	S	6568	GACACTGCTGAGGGGAACTCCATTGTGAAAGTGACCGTCATCACGCCACC	2	-	65298299-65298348	2qC1.3	Mus musculus sodium channel, voltage-gated, type III, alpha (Scn3a), mRNA. XM_001002989 XM_001003027 XM_001003034 XM_909273 XM_979947 XM_980008 XM_980233	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Nav1.3; Gm1000	Nav1.3; Gm1000
Mus musculus	RefSeq	ILMN_197248	ILMN_219957	SCN3A	NM_018732.2	NM_018732.2		20269	125630312	NM_018732.2	Scn3a	NP_061202.2	ILMN_1231903	001240400	S	293	TGCTGGTACCCCCGGGACCTGAGAGCTTCCGCCTTTTCACTCGAGAATCT	2	-	65374670-65374719	2qC1.3	Mus musculus sodium channel, voltage-gated, type III, alpha (Scn3a), mRNA. XM_001002989 XM_001003027 XM_001003034 XM_909273 XM_979947 XM_980008 XM_980233	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Nav1.3; Gm1000	Nav1.3; Gm1000
Mus musculus	MEEBO	ILMN_190317	ILMN_190317	AI790326	scl37358.5_279				19527225	NM_134003	AI790326		ILMN_2469075	005550458	S	7	AAATGGGTAAATGCTGTTTTACGTATGTATTTTAGAAACATCTTGTTAAA										
Mus musculus	RefSeq	ILMN_209699	ILMN_209699	JPH4	NM_177049.4	NM_177049.4		319984	40254386	NM_177049.4	Jph4	NP_796023.2	ILMN_1257415	006620441	S	3168	CCTAAGGGGACTGAAGAAGACATTTCTGCAGAGGGTTAGAGGCGCTGCAG	14	-	55726277-55726326	14qC3	Mus musculus junctophilin 4 (Jph4), transcript variant a, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9330157P13Rik; AI425998; JPHL1; JP-4	9330157P13Rik; AI425998; JPHL1; JP-4
Mus musculus	RefSeq	ILMN_196596	ILMN_196596	2210418O10RIK	NM_172929.2	NM_172929.2		76958	124430569	NM_172929.2	2210418O10Rik	NP_766517.2	ILMN_2745665	000870181	S	2056	CTATTAACCAAGATATAGAAAATATAAAAAAGGGCCTAGGTGATCTTACT					Mus musculus RIKEN cDNA 2210418O10 gene (2210418O10Rik), transcript variant 2, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC116027; C230069C04	MGC116027; C230069C04
Mus musculus	Riken	ILMN_205017	ILMN_205017	A230052G08RIK	ri|A230052G08|PX00128C23|AK038647|4397					AK038647	A230052G08Rik		ILMN_2569358	006060021	S	4097	TGTGTCTGAGAGAAGTGTTCACATAGCCCTACGCCTTTCTCTGCTCCAGC										
Mus musculus	MEEBO	ILMN_212020	ILMN_212020	NFIB	scl0002746.1_10				15679965	BC014290	Nfib		ILMN_1227325	000540474	S	1564	CTGGACCATGAATCAAAACGGCAGGCATTTATACCCCAGTACCAGTGAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218798	ILMN_218798	D030011O10RIK	NM_177192.2	NM_177192.2		320560	31343027	NM_177192.2	D030011O10Rik	NP_796166.1	ILMN_2972600	000830403	S	2882	CAGCTGCTCTCTAACCAGCCACTGACCAAGAAGCTTTATAAGCGCTATGC	6	-	148962738-148962759:148965504-148965531	6qG3	Mus musculus RIKEN cDNA D030011O10 gene (D030011O10Rik), mRNA.				9330160C06Rik	9330160C06Rik
Mus musculus	RefSeq	ILMN_218577	ILMN_229450	MINK1	NM_176893.2	NM_176893.2		50932	114052415	NM_176893.2	Mink1	NP_795712.2	ILMN_1242688	003370564	S	4055	CTGGAGGAAGCAGCCAAGTTTACTTTATGACTCTGAACCGTAACTGCATC	11	+	70427153-70427202	11qB3	Mus musculus misshapen-like kinase 1 (zebrafish) (Mink1), transcript variant 2, mRNA.		The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10708748] [evidence IEP]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MINK; B55; RP23-122P1.6; Map4k6; Ysk2	MINK; B55; RP23-122P1.6; Map4k6; Ysk2
Mus musculus	RefSeq	ILMN_222926	ILMN_222926	OLFR738	NM_146420.1	NM_146420.1		258662	33239349	NM_146420.1	Olfr738	NP_666532.1	ILMN_2839257	003800487	S	654	CATGGGGTCTTATGCTCTAGTAATGAGGGCTGTGCTCAGGGTCCCTTCAG	14	+	51033874-51033923	14qC1	Mus musculus olfactory receptor 738 (Olfr738), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR106-3	MOR106-3
Mus musculus	RefSeq	ILMN_249815	ILMN_249815	OLFR1257	NM_146982.1	NM_146982.1		258984	49227473	NM_146982.1	Olfr1257	NP_667193.1	ILMN_2806803	006330435	S	644	CCTATGTTGCCATCCTGCGCTCCCTAAAGAACCACAGTGCAGAGGGAAGG	2	+	89721628-89721677	2qE1	Mus musculus olfactory receptor 1257 (Olfr1257), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR232-1	MOR232-1
Mus musculus	Riken	ILMN_203848	ILMN_203848	A530098M07RIK	ri|A530098M07|PX00143J12|AK041312|2918					AK041312	A530098M07Rik		ILMN_2560417	006290167	S	2422	TGTGGCATACTGTGGCTGCTAAGGATGTCTCTCTTCTGAGCACTGCAGGC										
Mus musculus	Riken	ILMN_204475	ILMN_204475	B130018F13RIK	ri|B130018F13|PX00157J02|AK044994|1305					AK044994	B130018F13Rik		ILMN_2565262	005220707	S	1082	GGGCAAGTTTAGAGCCTGCGCTGAGTGCTGTTTGGCGGATTTTAGCTGGG										
Mus musculus	RefSeq	ILMN_209697	ILMN_209697	MCL1	NM_008562.3	NM_008562.3		17210	133892763	NM_008562.3	Mcl1	NP_032588.1	ILMN_1216732	000060048	S	3358	CTGGTAGAGCACCTAACACTTTAACAGCTGTTCCCGAAAGGGTTAGGACC	3	+	95466971-95467020	3qF2.1	Mus musculus myeloid cell leukemia sequence 1 (Mcl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence ISO]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mcl-1; AW556805	Mcl-1; AW556805
Mus musculus	RefSeq	ILMN_244026	ILMN_244026	B430211C08RIK	NM_001039146.1	NM_001039146.1		627280	85702339	NM_001039146.1	B430211C08Rik	NP_001034235.1	ILMN_2901576	004540184	S	3271	CTTCCTGGCAATTTTGGTGAGATGATGGTCAGAGGAAGAAGGTCCAAGGT	7	-	15147118-15147167	7qA1	Mus musculus RIKEN cDNA B430211C08 gene (B430211C08Rik), mRNA. XM_921960					
Mus musculus	RefSeq	ILMN_200719	ILMN_200719	LOC384505	XM_357679.1	XM_357679.1			38085438	XM_357679.1	LOC384505		ILMN_2539764	006420474	S	1735	GCAGAGATGAAGCTCGCTGAGATGGAAAGTGAGTGCACAGATGCTCACAG										
Mus musculus	MEEBO	ILMN_211582	ILMN_211582	CHD3	scl00216848.1_46				51828490	XM_484041	Chd3		ILMN_2617348	006520376	S	4391	ATTCAATACTCGACAACGGAAGGCCTTCCTTAACGCTGTGATGCGCTGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IDA]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]	The formation or destruction of chromatin structures [goid 6333] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_202173	ILMN_313232	LOC100047486	XR_033404.1	XR_033404.1		100047486	149271315	XR_033404.1	LOC100047486		ILMN_2547571	004040528	S	76	TGCAAGGAAGGGGTTCTCCGCCGAGCGCCTCGGTCCTGAAGCATGGCAGC					PREDICTED: Mus musculus hypothetical protein LOC100047486 (LOC100047486), misc RNA.					
Mus musculus	RefSeq	ILMN_218305	ILMN_311790	LOC100045359	XM_001474179.1	XM_001474179.1		100045359	149266895	XM_001474179.1	LOC100045359	XP_001474229.1	ILMN_1229593	006280286	S	2365	AACTGGCCCACCTTCAACACTCCCTCTAGGCACCCAGACCTCTAGTGGCA					PREDICTED: Mus musculus similar to Development and differentiation enhancing (LOC100045359), mRNA.					
Mus musculus	RefSeq	ILMN_218305	ILMN_311790	LOC100045359	XM_001474179.1	XM_001474179.1		100045359	149266895	XM_001474179.1	LOC100045359	XP_001474229.1	ILMN_2694153	001010528	S	3973	GTTTAGATGAGTGGGTTTGTACATCTTATGGCGAGTGGCCACCCCTGAGA					PREDICTED: Mus musculus similar to Development and differentiation enhancing (LOC100045359), mRNA.					
Mus musculus	RefSeq	ILMN_202635	ILMN_244017	RYR2	NM_023868.2	NM_023868.2		20191	124430577	NM_023868.2	Ryr2	NP_076357.2	ILMN_1251989	000270008	S	353	GAGCCCCTAGAACATCCTGGTTAGCAGTGACTAGAGCGTCCAGAGAAGCC	13	-	12198810-12198859	13qA1	Mus musculus ryanodine receptor 2, cardiac (Ryr2), mRNA.	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IPI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them [goid 31000] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts [goid 5219] [evidence IDA]	9330127I20Rik	9330127I20Rik
Mus musculus	RefSeq	ILMN_194078	ILMN_244017	RYR2	NM_023868.2	NM_023868.2		20191	124430577	NM_023868.2	Ryr2	NP_076357.2	ILMN_1244913	002190168	S	16701	GACAGGTTCAGAATGGAAGCGAGGTCATTCTGCGAACATTGGAGATCTTT	13	-	11645432-11645481	13qA1	Mus musculus ryanodine receptor 2, cardiac (Ryr2), mRNA.	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IPI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them [goid 31000] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts [goid 5219] [evidence IDA]	9330127I20Rik	9330127I20Rik
Mus musculus	RefSeq	ILMN_194078	ILMN_244017	RYR2	NM_023868.2	NM_023868.2		20191	124430577	NM_023868.2	Ryr2	NP_076357.2	ILMN_1242706	002320347	S	15195	CAGTGCCACATGGCTTTGAAACCCATACTTTACAGGAACACAACCTGGCC	13	-	11648872-11648921	13qA1	Mus musculus ryanodine receptor 2, cardiac (Ryr2), mRNA.	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IPI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them [goid 31000] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts [goid 5219] [evidence IDA]	9330127I20Rik	9330127I20Rik
Mus musculus	RefSeq	ILMN_222222	ILMN_222222	PLA2G2F	NM_012045.3	NM_012045.3		26971	141803042	NM_012045.3	Pla2g2f	NP_036175.2	ILMN_1230424	001980220	S	1980	GAGGCAGGGAAGGGTGTTTATGTAGATAGCGGTGTCTATAATGGCAGCAC	4	-	138306844-138306893	4qD3	Mus musculus phospholipase A2, group IIF (Pla2g2f), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_248452	ILMN_248452	ANKRD50	NM_001033198.2	NM_001033198.2		99696	142374817	NM_001033198.2	Ankrd50	NP_001028370.1	ILMN_3160568	006100274	S	1677	CAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAG	3	-	38351218-38351267	3qB	Mus musculus ankrin repeat domain 50 (Ankrd50), mRNA.				E430012K20Rik; KIAA1223; AI662170; mKIAA1223; mKIAA3019	E430012K20Rik; KIAA1223; AI662170; mKIAA1223; mKIAA3019
Mus musculus	RefSeq	ILMN_211808	ILMN_211808	SLCO2B1	NM_175316.3	NM_175316.3		101488	142378388	NM_175316.3	Slco2b1	NP_780525.1	ILMN_2619707	003120546	S	3704	CCTGTTTCCCAGTTTGTACAGGAATAGCCTGGCTGTATACATACAGCTGA	7	-	106806941-106806990	7qE2	Mus musculus solute carrier organic anion transporter family, member 2b1 (Slco2b1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence ISO]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISO]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISO]	AI060904; AI852653; Slc21a9; MGC106224; OATP-B	AI060904; AI852653; Slc21a9; MGC106224; OATP-B
Mus musculus	RefSeq	ILMN_219515	ILMN_251466	4931400O07RIK	XM_985358.1	XM_985358.1		70936	94407492	XM_985358.1	4931400O07Rik	XP_990452.1	ILMN_2709916	002060017	S	520	GCATCCTCTCCCCAAAATTGAGAGCAGTAGTTATTTTGTTTTTTGTAATG	X	+	59721860-59721880:59721881-59721909	XqA6	PREDICTED: Mus musculus RIKEN cDNA 4931400O07 gene (4931400O07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194133	ILMN_194133	TTC7B	XM_127105.8	XM_127105.8		104718	149263479	XM_127105.8	Ttc7b	XP_127105.7	ILMN_2503715	004920671	S	3151	CTCAGTACTCGTCCATGCCAGGACACCAGCTGACAACGTCTCGGTCTCAT	12	-	101539255-101539304	12qE	PREDICTED: Mus musculus tetratricopeptide repeat domain 7B, transcript variant 1 (Ttc7b), mRNA.					
Mus musculus	RefSeq	ILMN_216858	ILMN_216858	ZXDC	NM_030260.2	NM_030260.2		80292	142381340	NM_030260.2	Zxdc	NP_084536.1	ILMN_2676172	005550681	S	2321	CCTAATGCACTTTGGATCGTGTTGGGGATGAATCCTGTCTATGCAGACGG	6	+	90332581-90332630	6qD1	Mus musculus ZXD family zinc finger C (Zxdc), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	B930086F11Rik; BC003332; MGC7160; A930012H20	B930086F11Rik; BC003332; MGC7160; A930012H20
Mus musculus	Riken	ILMN_205811	ILMN_205811	MKLN1	ri|A130067M19|PX00124J19|AK037967|3636					AK037967	Mkln1		ILMN_1221357	007610360	S	3289	GGCTTCCCAGAAGCACACATCTGTTCAATGACACCAGGGTCCTTAAGCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215293	ILMN_215293	SLC30A7	NM_023214.3	NM_023214.3		66500	31560237	NM_023214.3	Slc30a7	NP_075703.1	ILMN_2862418	000270564	S	1642	CCTTCTGAATGTCTTCACTAAAGCTGCTGGAAACCACTGCTTTTATTCCC	3	-	115938278-115938327	3qG1	Mus musculus solute carrier family 30 (zinc transporter), member 7 (Slc30a7), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IC ]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	ZnT-7; ZnT7; Zntl2; 1810059J10Rik	ZnT-7; ZnT7; Zntl2; 1810059J10Rik
Mus musculus	Riken	ILMN_206516	ILMN_206516	LAMA4	ri|D830032F10|PX00199H07|AK085945|2595					AK085945	Lama4		ILMN_2580684	003940167	S	2511	TGTGCAATCACTATAGAATAGAACTAACATGTGACCCAGACGAACCCCTC						A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212203	ILMN_212203	SEMA6B	NM_013662.1	NM_013662.1		20359	7305474	NM_013662.1	Sema6b	NP_038690.1	ILMN_2623920	000610368	S	2860	AGCCCCGGGGTGGGCGGGAGGAGGCTGACCTTTTACCTGCGCATAGACTT	17	-	56263201-56263250	17qD	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B (Sema6b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		Sema; MGC143995; VIb; MGC143996; Seman; semaZ	Sema; MGC143995; VIb; MGC143996; Seman; semaZ
Mus musculus	RefSeq	ILMN_212203	ILMN_212203	SEMA6B	NM_013662.1	NM_013662.1		20359	7305474	NM_013662.1	Sema6b	NP_038690.1	ILMN_3078870	004260093	I	611	CACGGTGACTGACTTCCTAGCCATCGACGCTGTTATCTACCGCAGCCTTG	17	-	56269446-56269495	17qD	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B (Sema6b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		Sema; MGC143995; VIb; MGC143996; Seman; semaZ	Sema; MGC143995; VIb; MGC143996; Seman; semaZ
Mus musculus	RefSeq	ILMN_212203	ILMN_212203	SEMA6B	NM_013662.1	NM_013662.1		20359	7305474	NM_013662.1	Sema6b	NP_038690.1	ILMN_3158135	002600561	A	3544	CAGCTGAGTCCAGGACCCTCTCCAGCCCTATCCCCATCAATAAAACTCTG	17	-	56262517-56262566	17qD	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B (Sema6b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		Sema; MGC143995; VIb; MGC143996; Seman; semaZ	Sema; MGC143995; VIb; MGC143996; Seman; semaZ
Mus musculus	RefSeq	ILMN_217348	ILMN_217348	ANP32B	NM_130889.2	NM_130889.2		67628	142363533	NM_130889.2	Anp32b	NP_570959.1	ILMN_1215011	006550707	S	1316	TTACTTTCTGTACAACAAGGAAAAGCTTTGTAAATAAAATCTTAACATTT	4	+	46485344-46485393	4qB1	Mus musculus acidic (leucine-rich) nuclear phosphoprotein 32 family, member B (Anp32b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Progression through S phase, the part of the mitotic cell cycle during which DNA synthesis takes place [goid 84] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ssp29; 2410015B15Rik; MGC103080; PAL31; PHAPI2a	Ssp29; 2410015B15Rik; MGC103080; PAL31; PHAPI2a
Mus musculus	RefSeq	ILMN_215655	ILMN_260522	GDF11	NM_010272.1	NM_010272.1		14561	112807179	NM_010272.1	Gdf11	NP_034402.1	ILMN_1223036	006940121	S	1605	AAGCAGACAAGTAGAGAGATTGAAATGGGAGTAAGCAGAGAGCCCTGCCC	10	-	128321758-128321807	10qD3	Mus musculus growth differentiation factor 11 (Gdf11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the spinal cord [goid 21512] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IDA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bmp11	Bmp11
Mus musculus	RefSeq	ILMN_228342	ILMN_228342	4833426J09RIK	NM_001024606.1	NM_001024606.1		382051	66841377	NM_001024606.1	4833426J09Rik	NP_001019777.1	ILMN_3057482	004040400	I	2864	GGGTGGCAGTTGACGACATGTAGGCAGGACTTCTTCAGTGGTTTGTGGAG	8	+	107120115-107120164	8qD3	Mus musculus RIKEN cDNA 4833426J09 gene (4833426J09Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Pdp2; KIAA1348; Gm1705; mKIAA1348	Pdp2; KIAA1348; Gm1705; mKIAA1348
Mus musculus	RefSeq	ILMN_201167	ILMN_228342	4833426J09RIK	NM_001024606.1	NM_001024606.1		382051	66841377	NM_001024606.1	4833426J09Rik	NP_001019777.1	ILMN_1232249	006510543	S	277	GCTGAAGTGGAGGCCCTTTTCTCCGGCATTGGCATCATCAGCCCTCAAGT	8	+	107117528-107117577	8qD3	Mus musculus RIKEN cDNA 4833426J09 gene (4833426J09Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Pdp2; KIAA1348; Gm1705; mKIAA1348	Pdp2; KIAA1348; Gm1705; mKIAA1348
Mus musculus	RefSeq	ILMN_228342	ILMN_228342	4833426J09RIK	NM_001024606.1	NM_001024606.1		382051	66841377	NM_001024606.1	4833426J09Rik	NP_001019777.1	ILMN_3134598	005080450	A	3427	GGCTTGAGTTGAAAGTTGACCTCCGACCTTCATGTGTGCACCGTGGCATG	8	+	107120678-107120727	8qD3	Mus musculus RIKEN cDNA 4833426J09 gene (4833426J09Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Pdp2; KIAA1348; Gm1705; mKIAA1348	Pdp2; KIAA1348; Gm1705; mKIAA1348
Mus musculus	RefSeq	ILMN_212739	ILMN_212739	DHX9	NM_007842.1	NM_007842.1		13211	24429589	NM_007842.1	Dhx9	NP_031868.1	ILMN_2629748	004670575	S	4147	ATCCGGTGGGGGCTATAGAGGATCTGGAGGATTCCAGCGAAGGGGTTATG	1	-	155303252-155303301	1qG3	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Dhx9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	NDH II; NDHII; Ddx9; AI326842; RHA; MGC90954	NDH II; NDHII; Ddx9; AI326842; RHA; MGC90954
Mus musculus	RefSeq	ILMN_200041	ILMN_232793	LOC637089	XM_912678.2	XM_912678.2		637089	94374543	XM_912678.2	LOC637089	XP_917771.1	ILMN_1234247	001500593	S	255	CCCAAGGGGAAGAAGGGGAAAGCTGATGCCGGGAAAGATGCGAATAATCC					PREDICTED: Mus musculus similar to high mobility group nucleosomal binding domain 2 (LOC637089), mRNA.					
Mus musculus	RefSeq	ILMN_215144	ILMN_259185	1700094D03RIK	XM_910384.3	XM_910384.3		73545	149251578	XM_910384.3	1700094D03Rik	XP_915477.1	ILMN_1259302	006590133	S	193	TGCTGCCCTAAGGATGAAGGATACTAAGGAACAGGAATTAGCACTGTCTA				3qF1	PREDICTED: Mus musculus RIKEN cDNA 1700094D03 gene (1700094D03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223098	ILMN_223098	MAP4K4	NM_008696.2	NM_008696.2		26921	145279236	NM_008696.2	Map4k4	NP_032722.2	ILMN_1233116	007650739	S	3852	CGATCTGTGGAAACTGGTCACTTGGATGGTGTATTTATGCACAAAAGGGC				1qB	Mus musculus mitogen-activated protein kinase kinase kinase kinase 4 (Map4k4), mRNA.		A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	AU043147; AU045934; 9430080K19Rik; Nik; HGK; AW046177	AU043147; AU045934; 9430080K19Rik; Nik; HGK; AW046177
Mus musculus	RefSeq	ILMN_197322	ILMN_197322	LOC329526	XM_283754.2	XM_283754.2			38075137	XM_283754.2	LOC329526		ILMN_2527719	000870088	S	657	CCCTGGCCTGTGGAAAAGCCTGAGCTGTGTCCTGAATAACAATGGCCTTC										
Mus musculus	RefSeq	ILMN_224211	ILMN_246979	TMEM146	XM_001052081.2	XM_001052081.2		106757	149269389	XM_001052081.2	Tmem146	XP_001052081.2	ILMN_1234738	001260543	S	1408	TGCTACCAGATACTCCAGCTCTGCCTAGGGGTCTGCTTCTGCACCTGGCT				17qD	PREDICTED: Mus musculus transmembrane protein 146 (Tmem146), mRNA.					
Mus musculus	RefSeq	ILMN_219489	ILMN_219489	CAR13	NM_024495.4	NM_024495.4		71934	144227225	NM_024495.4	Car13	NP_078771.1	ILMN_1249727	003170593	S	902	CGAGAATTTCACGTTTGTGGATTCTACTTGTCCAGCACCTCTGGCACGGC	3	+	14661654-14661703	3qA1	Mus musculus carbonic anhydrase 13 (Car13), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	2310075C21Rik	2310075C21Rik
Mus musculus	RefSeq	ILMN_217206	ILMN_217206	CCR3	NM_009914.3	NM_009914.3		12771	142378618	NM_009914.3	Ccr3	NP_034044.2	ILMN_2680290	004260435	S	2181	GCACACAGACCCTAGAAATCTCAGGAGGTGCTCTCTGGATTGAAGTGTGC	9	+	123945458-123945507	9qF4	Mus musculus chemokine (C-C motif) receptor 3 (Ccr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IDA]	Cmkbr1l2; Cmkbr3; CC-CKR3; CKR3; MGC124266; MGC124265	Cmkbr1l2; Cmkbr3; CC-CKR3; CKR3; MGC124266; MGC124265
Mus musculus	RefSeq	ILMN_232610	ILMN_232610	OLFR1016	NM_001011758.1	NM_001011758.1		257915	58801303	NM_001011758.1	Olfr1016	NP_001011758.1	ILMN_3160958	001470424	S	534	TGACTTGCTTCCTTTGGTGAATCTGGCTTGTGGTGGCAAGGAAGGATACC	2	-	85639842-85639891	2qD	Mus musculus olfactory receptor 1016 (Olfr1016), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr1515; MOR188-1; MOR213-9	Olfr1515; MOR188-1; MOR213-9
Mus musculus	RefSeq	ILMN_198400	ILMN_198400	LOC381212	XM_355145.1	XM_355145.1			38084848	XM_355145.1	LOC381212		ILMN_2531554	001570347	S	1459	TGGAAGAGGAGGCTGGAGTTGAGGAAAGAAGTGGAGGGAGATGATGTGCC										
Mus musculus	RefSeq	ILMN_198400	ILMN_198400	LOC381212	XM_355145.1	XM_355145.1			38084848	XM_355145.1	LOC381212		ILMN_2666849	006370048	S	4917	TTGGGACGGGTGTGGGGTGTAGATTATGGTAATAAGAGGAATCCCTGGTT										
Mus musculus	RefSeq	ILMN_211710	ILMN_211710	HECTD2	NM_172637.1	NM_172637.1		226098	27369919	NM_172637.1	Hectd2	NP_766225.1	ILMN_2839877	001440286	S	4131	GGTCTGCATGTCTAACGATGTGTGTGTATTGGTAGCTATGTCACTTTTGC	19	+	36685790-36685839	19qC2	Mus musculus HECT domain containing 2 (Hectd2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4921524L07; AW212605; A630025O09Rik	4921524L07; AW212605; A630025O09Rik
Mus musculus	MEEBO	ILMN_211790	ILMN_211790	9430004M15	scl23246.4.1_200	NM_177728.2			31343179	NM_177728.2	9430004M15		ILMN_2619556	005810239	S	2813	CATGTACAGAGTACACAGCTTAGGTACTGCTGTCATTGTGTAGGCTTGCC										
Mus musculus	RefSeq	ILMN_199539	ILMN_199539	LOC382708	XM_356636.1	XM_356636.1			38074071	XM_356636.1	LOC382708		ILMN_2535586	004860750	S	183	CCATGTAGAAGGGTCTGTAGCAGTGACATTACAGAAGACTATCGTATGGG										
Mus musculus	RefSeq	ILMN_201595	ILMN_242041	WHSC1L1	NM_001081269.1	NM_001081269.1		234135	124486902	NM_001081269.1	Whsc1l1	NP_001074738.1	ILMN_1249942	002490280	S	5927	GCGTCGGCCCGCAGAATTCACTTGCATCTAGCACTTAGGATCTAGTCCAG	8	+	26826121-26826170	8qA2	Mus musculus Wolf-Hirschhorn syndrome candidate 1-like 1 (human) (Whsc1l1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI528490; WHISTLE; NSD3; 6720429E03; A530023P05	AI528490; WHISTLE; NSD3; 6720429E03; A530023P05
Mus musculus	RefSeq	ILMN_217722	ILMN_217722	RFT1	NM_177815.3	NM_177815.3		328370	87299620	NM_177815.3	Rft1	NP_808483.2	ILMN_2857143	004670382	S	2121	GCCAGAGGCAGAGGCAGACGAATATCCAAGTTCCAGGACAGCCAGAGCTG	14	+	31504252-31504301	14qB	Mus musculus RFT1 homolog (S. cerevisiae) (Rft1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	D930025H04	D930025H04
Mus musculus	MEEBO	ILMN_216441	ILMN_216441	B230373P09RIK	scl45762.22.1_73	NM_177336.2			31341031	NM_177336.2	B230373P09Rik		ILMN_2671128	005220475	S	3404	GGATAAAGCGTGGTGTAGCTCTCATCTGTGCCCTGGATTACTAGACCCAG										
Mus musculus	RefSeq	ILMN_194475	ILMN_311487	LOC100048280	XM_001480149.1	XM_001480149.1		100048280	149257005	XM_001480149.1	LOC100048280	XP_001480199.1	ILMN_2506757	003780170	S	5620	TTGGAAGGTATCTGTCTTGGTGTTAATGCTTGTAAATCATTTTCCCCCAT					PREDICTED: Mus musculus similar to crooked legs CG14938-PB, transcript variant 1 (LOC100048280), mRNA.					
Mus musculus	RefSeq	ILMN_189511	ILMN_311487	LOC100048280	XM_001480149.1	XM_001480149.1		100048280	149257005	XM_001480149.1	LOC100048280	XP_001480199.1	ILMN_2461926	002350762	S	2743	GTGCAGGACAAGAATTGGAACAAACTCATAATCTGTCACCGTCACCAGGT					PREDICTED: Mus musculus similar to crooked legs CG14938-PB, transcript variant 1 (LOC100048280), mRNA.					
Mus musculus	MEEBO	ILMN_184897	ILMN_184897	RNF40	scl32025.19_246				26986594	NM_172281	Rnf40		ILMN_1242623	002480286	S	3	GCCTTTGTGGGTTGCATACTGGGATATGTAGTCCTTTACCTCTAAGGGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_209190	ILMN_209190	A530088I07RIK	scl28069.32.1_8	NM_175437.2			31341903	NM_175437.2	A530088I07Rik		ILMN_2593416	004560471	S	3631	TCTGTTCATATTGCTTGTGTTACAAATTACTCTGTACTGGAGACAGCAGG										
Mus musculus	RefSeq	ILMN_212041	ILMN_212041	EPB4.1L5	NM_145506.2	NM_145506.2		226352	30841013	NM_145506.2	Epb4.1l5	NP_663481.2	ILMN_2898440	003800427	S	2933	GGATAACTAGAGAGAGGTTCAGTCTCTAGGCGTGAACTCCTCAGACCACT	1	-	121376042-121376091	1qE2.3	Mus musculus erythrocyte protein band 4.1-like 5 (Epb4.1l5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	The process whose specific outcome is the progression of the axial mesoderm over time, from its formation to the mature structure. The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord [goid 48318] [evidence IMP]; The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube [goid 48339] [evidence IMP]	Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AL022914; 1700030C16Rik; BE37; NBL5	AL022914; 1700030C16Rik; BE37; NBL5
Mus musculus	RefSeq	ILMN_210046	ILMN_210046	ACR	NM_013455.2	NM_013455.2		11434	114205397	NM_013455.2	Acr	NP_038483.1	ILMN_1224629	002760403	S	1168	AGGCACCGCACAACGCTGTCTTTTGCTCGGCGTCTCCAGCGCCTCATAGA	15	+	89404680-89404729	15qE3	Mus musculus acrosin prepropeptide (Acr), mRNA.	A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction [goid 43159] [evidence TAS]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IMP]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IGI]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI323726; MGC124043	AI323726; MGC124043
Mus musculus	RefSeq	ILMN_210046	ILMN_210046	ACR	NM_013455.2	NM_013455.2		11434	114205397	NM_013455.2	Acr	NP_038483.1	ILMN_2601684	006770692	S	234	TAACAGCCGCAGGTACCACGCCTGTGGAGGCAGCCTCCTGAACTCCCACT	15	+	89399888-89399937	15qE3	Mus musculus acrosin prepropeptide (Acr), mRNA.	A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction [goid 43159] [evidence TAS]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IMP]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IGI]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI323726; MGC124043	AI323726; MGC124043
Mus musculus	MEEBO	ILMN_190416	ILMN_190416	MT-ND1	scl0017716.1_225						mt-Nd1		ILMN_2469966	000130204	S	20	CATCAACATTCCTATGGATCCGAGCATCTTAATCACGCTTCCGTTACGAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217276	ILMN_217276	MMAB	NM_029956.3	NM_029956.3		77697	142373343	NM_029956.3	Mmab	NP_084232.1	ILMN_2681347	002370204	S	458	AAGGGCCTGTCCTGGAGCTGGAGCGGTGGATTGACAAGTACTCCAGCCAG	5	-	114886748-114886797	5qF	Mus musculus methylmalonic aciduria (cobalamin deficiency) type B homolog (human) (Mmab), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 9236] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + cob(I)alamin + H2O = phosphate + diphosphate + adenosylcobalamin [goid 8817] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ATR; 9130222L19Rik	ATR; 9130222L19Rik
Mus musculus	RefSeq	ILMN_217276	ILMN_217276	MMAB	NM_029956.3	NM_029956.3		77697	142373343	NM_029956.3	Mmab	NP_084232.1	ILMN_2764301	004390484	S	2648	CCAGGCACTAACAGATTGCTGTCGCATCTCTCAGCTCAGTCTTCCTTAGC	5	-	114881332-114881381	5qF	Mus musculus methylmalonic aciduria (cobalamin deficiency) type B homolog (human) (Mmab), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 9236] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + cob(I)alamin + H2O = phosphate + diphosphate + adenosylcobalamin [goid 8817] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ATR; 9130222L19Rik	ATR; 9130222L19Rik
Mus musculus	MEEBO	ILMN_190043	ILMN_190043	TEX10	scl0072812.1_330				51709184	XM_485378	Tex10		ILMN_2466692	005960431	S	10	GGTCGGGCCAGAGACTCCACTCGACGTCCACTGAGGTATAGGAACCATGG										
Mus musculus	RefSeq	ILMN_211293	ILMN_211293	EIF4E3	NM_025829.2	NM_025829.2		66892	27229016	NM_025829.2	Eif4e3	NP_080105.1	ILMN_2893605	000870148	S	2052	GATGGCTCTCGGTAGCATCTGTTTATAAAAAGTCAGGGGCCTCCACTTGC	6	-	99591011-99591060	6qD3	Mus musculus eukaryotic translation initiation factor 4E member 3 (Eif4e3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	1300018P11Rik; eIF4E-3; AI451927	1300018P11Rik; eIF4E-3; AI451927
Mus musculus	RefSeq	ILMN_207531	ILMN_207531	4931408A02RIK	XM_358890.1	XM_358890.1			38081526	XM_358890.1	4931408A02Rik		ILMN_1260552	002810692	I	107	TGTACGCTGCTGCCTTGGTTCTAAAGTGCGTCACGGACGGGCACCAGCCG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198366	ILMN_198366	LOC381185	XM_355112.1	XM_355112.1			38084510	XM_355112.1	LOC381185		ILMN_1236999	000510332	S	781	CTAACAGCAGAAATGTGTGCAAATGAGAACCAGCGACCAGAGTGTTCCTG										
Mus musculus	RefSeq	ILMN_215376	ILMN_215376	SYT14	NM_181546.2	NM_181546.2		329324	31581544	NM_181546.2	Syt14	NP_853524.1	ILMN_1231230	002060497	S	1463	TGTCCAAATGCAAGACATCCACCCGCAGAGGGCAGCCAAATCCGGTGTAC	1	-	194723719-194723768	1qH6	Mus musculus synaptotagmin XIV (Syt14), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]		Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	sytXIV; B230320I09Rik	sytXIV; B230320I09Rik
Mus musculus	RefSeq	ILMN_208831	ILMN_208831	TSEN15	NM_025677.2	NM_025677.2		66637	141803579	NM_025677.2	Tsen15	NP_079953.1	ILMN_1243752	006420672	S	959	ACGTGGTCATGGGTGTGAATGACACGCCAGGCTATGAAAGTGACAATCAG	1	-	154217989-154218038	1qG3	Mus musculus tRNA splicing endonuclease 15 homolog (S. cerevisiae) (Tsen15), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]	AL023077	AL023077
Mus musculus	RefSeq	ILMN_221302	ILMN_243415	1700013F07RIK	XM_910312.2	XM_910312.2		75504	94370285	XM_910312.2	1700013F07Rik	XP_915405.1	ILMN_2733671	000610494	S	587	GGTGACAACCAGGCTAATTTCAACATGGTGGAACATCCAGCCACCCATCT				3qF3	PREDICTED: Mus musculus RIKEN cDNA 1700013F07 gene (1700013F07Rik), mRNA.					
Mus musculus	Riken	ILMN_201962	ILMN_201962	HBB-B1	ri|0910001P14|R000005H07|AK003096|623					AK003096	Hbb-b1		ILMN_2545963	006770100	S	78	AAGGCTGCTGTCTCTGGCCTGTGGGGAAAGGTGAACGCCGATGAAGTTGG						An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IMP]		
Mus musculus	RefSeq	ILMN_208861	ILMN_229278	CYP2C65	NM_028191.1	NM_028191.1		72303	58696419	NM_028191.1	Cyp2c65	NP_082467.1	ILMN_1241162	005690446	S	1087	TACATTGATCTCCTTCCCACCAGCCTTCCCCATGCCGTGACCCGTGACGT	19	+	39162167-39162216	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 65 (Cyp2c65), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC144817; 2210009K14Rik; MGC144816	MGC144817; 2210009K14Rik; MGC144816
Mus musculus	RefSeq	ILMN_208861	ILMN_229278	CYP2C65	NM_028191.1	NM_028191.1		72303	58696419	NM_028191.1	Cyp2c65	NP_082467.1	ILMN_2765099	005340035	S	1100	TTCCCACCAGCCTTCCCCATGCCGTGACCCGTGACGTGAAATTCAGAGAG	19	+	39162180-39162229	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 65 (Cyp2c65), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC144817; 2210009K14Rik; MGC144816	MGC144817; 2210009K14Rik; MGC144816
Mus musculus	RefSeq	ILMN_229278	ILMN_229278	CYP2C65	NM_028191.1	NM_028191.1		72303	58696419	NM_028191.1	Cyp2c65	NP_082467.1	ILMN_3004939	002970079	S	1217	TCCCCAACCCAGAGAAGTTTGACCCCAGTCACTTTCTGGATGAGCGTGGC	19	+	39165170-39165219	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 65 (Cyp2c65), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC144817; 2210009K14Rik; MGC144816	MGC144817; 2210009K14Rik; MGC144816
Mus musculus	RefSeq	ILMN_208770	ILMN_208770	CES5	NM_172759.2	NM_172759.2		234673	141802881	NM_172759.2	Ces5	NP_766347.1	ILMN_2589350	000780333	S	2290	AACTGTGTCCATTGTCCCTATAGAGGAAATCGCATCCTTTCCAAATTGCC	8	+	107458173-107458222	8qD3	Mus musculus carboxylesterase 5 (Ces5), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]	9030624L02Rik	9030624L02Rik
Mus musculus	MEEBO	ILMN_192208	ILMN_192208	4930554N03RIK	scl54349.2.1_254						4930554N03Rik		ILMN_1230540	000540280	S	14	CCCACAGTAAGCTCAATTGTACTTTGACCTTGTTTCTTCTCACCTTGAGG										
Mus musculus	MEEBO	ILMN_209039	ILMN_209039	1700006J14RIK	scl38372.2.1_0	NM_177313.2			31343317	NM_177313.2	1700006J14Rik		ILMN_2591972	002510408	S	206	ACATCTTGGAAGGGGTGAGCGCCACAGGACAACGGGGTTTCCCAGGATTC										
Mus musculus	RefSeq	ILMN_204582	ILMN_235883	GLS	XM_984943.1	XM_984943.1		14660	94365026	XM_984943.1	Gls	XP_990037.1	ILMN_1222066	004120524	S	4502	CTTGCCACTGCCCTGCTTGTGGACACTAATCATCTCTTTTTCTTGTATCC				1qC1.1	PREDICTED: Mus musculus glutaminase, transcript variant 3 (Gls), mRNA.		The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6543] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [evidence IMP]		
Mus musculus	MEEBO	ILMN_208617	ILMN_208617	LASS5	scl46732.12_85						Lass5		ILMN_2588102	000670458	S	2386	CTTTTATGCATTCTAAGAGGAATCTGACAGAACATCTATATCTTTGGGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]		
Mus musculus	RefSeq	ILMN_233027	ILMN_233027	MKNK1	NM_021461.2	NM_021461.2		17346	31560321	NM_021461.2	Mknk1	NP_067436.1	ILMN_2845991	007330241	S	2294	GACTGCTGTGTCTGAGAGGAAGCCCTGTGCCCTGCTATGAGGAATGCTGC	4	+	115376981-115377030	4qD1	Mus musculus MAP kinase-interacting serine/threonine kinase 1 (Mknk1), mRNA.		A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2410048M24Rik; Mnk1	2410048M24Rik; Mnk1
Mus musculus	RefSeq	ILMN_214253	ILMN_214253	AKAP10	NM_019921.2	NM_019921.2		56697	40807353	NM_019921.2	Akap10	NP_064305.2	ILMN_1220276	004390692	S	3011	GGAGACTCACTCGCTGCCCTTCTGCTTAGTTGGCTTTGCACTTGTGGCAC	11	-	61685596-61685645	11qB2	Mus musculus A kinase (PRKA) anchor protein 10 (Akap10), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISS]	D-AKAP2; B130049N18Rik; 1500031L16Rik	D-AKAP2; B130049N18Rik; 1500031L16Rik
Mus musculus	RefSeq	ILMN_214253	ILMN_214253	AKAP10	NM_019921.2	NM_019921.2		56697	40807353	NM_019921.2	Akap10	NP_064305.2	ILMN_2898867	005860437	S	3737	CATAGAGTCAAACGTGATTCTGAGTGTCCTCTGCCTTTGCATGCTTCAGG	11	-	61684870-61684919	11qB2	Mus musculus A kinase (PRKA) anchor protein 10 (Akap10), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISS]	D-AKAP2; B130049N18Rik; 1500031L16Rik	D-AKAP2; B130049N18Rik; 1500031L16Rik
Mus musculus	RefSeq	ILMN_214253	ILMN_214253	AKAP10	NM_019921.2	NM_019921.2		56697	40807353	NM_019921.2	Akap10	NP_064305.2	ILMN_2645981	002940075	S	3497	CTGCTTTCAGGGCATTTCTGGCTCTCCTGTTGAAGTATATTGACCCTTCC	11	-	61685110-61685159	11qB2	Mus musculus A kinase (PRKA) anchor protein 10 (Akap10), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISS]	D-AKAP2; B130049N18Rik; 1500031L16Rik	D-AKAP2; B130049N18Rik; 1500031L16Rik
Mus musculus	RefSeq	ILMN_189381	ILMN_228155	C79267	NM_183148.1	NM_183148.1		212632	34147164	NM_183148.1	C79267	NP_898971.1	ILMN_2680903	006020326	S	1135	GTCGATGCAGTGCAACTGTGCCTTCTCCCTTAAGCTGAGCCACTTTGAGC	4	+	139172594-139172643	4qD3	Mus musculus expressed sequence C79267 (C79267), mRNA.				MGC36549	MGC36549
Mus musculus	RefSeq	ILMN_200621	ILMN_200621	LOC383403	XM_357031.1	XM_357031.1			38084400	XM_357031.1	LOC383403		ILMN_2539407	006940438	S	705	GGATCCCCCGTATGCTCTGCAGGCCCAGAGGTCAGATGAACAAATTGGAC										
Mus musculus	RefSeq	ILMN_198893	ILMN_198893	LOC380626	XM_134575.5	XM_134575.5			38089455	XM_134575.5	LOC380626		ILMN_2533300	002360017	S	285	GGGCATTTTGTTTCTCTTTCTGAGAAGGTAACTTGAAACACTACAGAGCC										
Mus musculus	RefSeq	ILMN_198876	ILMN_198876	LOC328832	XM_283454.2	XM_283454.2			38089266	XM_283454.2	LOC328832		ILMN_1252500	002570681	S	140	CCTGACGCGACTGACAAGGACCGTGAAAGAGCAATATGAACCCCAAGATG										
Mus musculus	RefSeq	ILMN_218253	ILMN_218253	NR1H5	NM_198658.1	NM_198658.1		381463	38348549	NM_198658.1	Nr1h5	NP_941060.1	ILMN_2693605	005550709	S	2340	ATTTCCCTTCCTCTGCCTTGCCCTAAAACACCAGATTCATACGTGCAAGA	3	-	102744026-102744075	3qF2.2	Mus musculus nuclear receptor subfamily 1, group H, member 5 (Nr1h5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC141184; Fxrb	MGC141184; Fxrb
Mus musculus	RefSeq	ILMN_223216	ILMN_218253	NR1H5	NM_198658.1	NM_198658.1		381463	38348549	NM_198658.1	Nr1h5	NP_941060.1	ILMN_2760876	004480538	S	1477	CAGCATTTCGCCCACCTCATAGGGAGGCTTACTGAACTGAGAACTCTGAG	3	-	102744889-102744938	3qF2.2	Mus musculus nuclear receptor subfamily 1, group H, member 5 (Nr1h5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC141184; Fxrb	MGC141184; Fxrb
Mus musculus	Riken	ILMN_204165	ILMN_204165	C730036N12RIK	ri|C730036N12|PX00087M21|AK050316|3485					AK050316	C730036N12Rik		ILMN_1227821	003390164	S	3226	GGGTATAGGGCCATATTCTGGAGCGTGAGTAGCCTCTCAGAGTTTTTGGG										
Mus musculus	RefSeq	ILMN_217148	ILMN_217148	ART1	NM_009710.4	NM_009710.4		11870	141803149	NM_009710.4	Art1	NP_033840.2	ILMN_3161382	007150626	S	1045	GTCTCCAGCAACTTACCCGATGTTGACCGGCCCTGACTGAAGAAGGCTGG	7	+	109259290-109259315:109259316-109259339	7qE3	Mus musculus ADP-ribosyltransferase 1 (Art1), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IDA]	ADPRT	ADPRT
Mus musculus	MEEBO	ILMN_224149	ILMN_224149	OLFR318	scl0258494.1_229				33238885	NM_146501	Olfr318		ILMN_2775639	001410725	S	770	CCACCTACACCCAGCCACACTCCTTACATTCTCCTGGAAGGGACAAAGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209678	ILMN_209678	BEX1	NM_009052.2	NM_009052.2		19716	47059481	NM_009052.2	Bex1	NP_033078.2	ILMN_2607900	006350164	S	793	TAGCAGAATTTATCAATTGCATGGGAAGATCCGTATTACCTATTGTGAAC	X	-	132748534-132748583	XqF1	Mus musculus brain expressed gene 1 (Bex1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence ISO]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA407839; Rex3; MGC107097; AU018692; Bex4	AA407839; Rex3; MGC107097; AU018692; Bex4
Mus musculus	Riken	ILMN_204005	ILMN_204005	A630043J01RIK	ri|A630043J01|PX00146K15|AK041878|2054					AK041878	A630043J01Rik		ILMN_1246563	004200553	S	1887	GAGAAGGAGGCCCTGTGTGTGTTCTGCCACATACCTGCTTGCCTTTGGGC										
Mus musculus	RefSeq	ILMN_197175	ILMN_197175	LOC227559	XM_140809.1	XM_140809.1			20820475	XM_140809.1	LOC227559		ILMN_1232345	002900372	S	36	TCCCCCTGATAACTGGGTCAGCCAGGAAGAGACAGAAGACAACACATCTG										
Mus musculus	Riken	ILMN_202861	ILMN_202861	PDZK1	ri|4930528N10|PX00034J03|AK029752|2410					AK029752	Pdzk1		ILMN_1235474	002470671	S	2204	CTGTCCCCCAGACTGTCTGTTGTTGCTTGAGCACCTGGGATGATTCACTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_196236	ILMN_196236	TERC	NR_001579.1	NR_001579.1		21748	38157993	NR_001579.1	Terc		ILMN_2522855	003370619	S	10	CAGTTAAATAAAGCATTCTGCAATCCTATCCTAACTTTAAAAGGCTTATA	3	-	96218697-96218746	3qF2.1	Mus musculus telomerase RNA component (Terc), non-coding RNA.	Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits [goid 5697] [evidence IMP]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IGI]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the addition of telomeric repeats by telomerase [goid 32212] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a hemopoietic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells [goid 60218] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IMP]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes extension of the 3'- end of a DNA strand by one deoxynucleotide at a time using an internal RNA template that encodes the telomeric repeat sequence [goid 3720] [evidence IMP]; Provision of the template used by reverse transcriptase to synthesize the G-rich strand of telomeric DNA [goid 332] [evidence IMP]	mTR; mTER	mTR; mTER
Mus musculus	Riken	ILMN_204508	ILMN_204508	B230328G18RIK	ri|B230328G18|PX00160F23|AK045970|1192					AK045970	B230328G18Rik		ILMN_1222245	007040040	S	1093	TACCAGGGACAGGAAACGAGAGTGGGTGGGTTGAAGAGCAGGGTATTGGG										
Mus musculus	RefSeq	ILMN_260620	ILMN_260620	NPEPL1	NM_213733.1	NM_213733.1		228961	47523980	NM_213733.1	Npepl1	NP_998898.1	ILMN_2896049	006560687	S	2009	CCATTCTGTGAAGCAGGAGACCCTCACAGCTCCCACCAACCCCCAGTTCA	2	+	173948129-173948178	2qH4	Mus musculus aminopeptidase-like 1 (Npepl1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BC023239; C85514; mKIAA1974	BC023239; C85514; mKIAA1974
Mus musculus	RefSeq	ILMN_215594	ILMN_215594	PYCR2	NM_133705.1	NM_133705.1		69051	19526877	NM_133705.1	Pycr2	NP_598466.1	ILMN_2998548	004260019	S	1325	AGCATCCCCCTCAGCGGAAGTCTGTGGAGAGCTTTAGTTAGATCCGAGGC	1	+	182837980-182838029	1qH4	Mus musculus pyrroline-5-carboxylate reductase family, member 2 (Pycr2), mRNA.		The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [evidence IEA]	Leftb; 1810018M05Rik; P5cr2	Leftb; 1810018M05Rik; P5cr2
Mus musculus	Riken	ILMN_207068	ILMN_207068	6430575F08RIK	ri|6430575F08|PX00648H06|AK078290|989					AK078290	6430575F08Rik		ILMN_2584798	007650129	S	773	CGGGTTTGGATGAATTCCAACTTTGCTTCTCGCCTGCGGGACTGCGTGGG										
Mus musculus	RefSeq	ILMN_259376	ILMN_259376	PACSIN2	NM_011862.1	NM_011862.1		23970	7106380	NM_011862.1	Pacsin2	NP_035992.1	ILMN_2853342	007200465	S	2914	GTGCAGTGGGACTGTTGTGAGCCCCAGGGACGGGCACAAAGAGGACTTTT	15	-	83204110-83204159	15qE1	Mus musculus protein kinase C and casein kinase substrate in neurons 2 (Pacsin2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IDA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AI197433	AI197433
Mus musculus	MEEBO	ILMN_216101	ILMN_216101	MTSS1	scl47168.7.1_3	XM_356819.1			38077531	XM_356819.1	Mtss1		ILMN_2667363	006900370	S	274	CTCGACAAGAGATAAAAAAGAAGTCCTCTGACACGCTGAAGCTGCAGAAG						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IDA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217386	ILMN_217386	INPP5D	NM_010566.1	NM_010566.1		16331	6754355	NM_010566.1	Inpp5d	NP_034696.1	ILMN_2959191	004040523	S	4577	CTGAGGAAGAGTCTCCACCATAGTCCCCAAGGGCTGAGTTCTCCAGCCTG	1	+	89616789-89616838	1qD	Mus musculus inositol polyphosphate-5-phosphatase D (Inpp5d), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of B cell activation [goid 50869] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45409] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of lymphocyte differentiation [goid 45621] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of monocyte differentiation [goid 45656] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil differentiation [goid 45659] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of granulocyte differentiation [goid 30853] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50777] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]	s-SHIP; SHIP; 145kDa; SHIP-1; AI323613; MGC117680	s-SHIP; SHIP; 145kDa; SHIP-1; AI323613; MGC117680
Mus musculus	RefSeq	ILMN_223657	ILMN_223657	NUDT16L1	NM_025839.3	NM_025839.3		66911	146135066	NM_025839.3	Nudt16l1	NP_080115.1	ILMN_2767227	003830020	S	1144	CTTGGTGTATGAACTGTGGTTTGGTTTCAGAATGGCTGTGCCCCACATGA				16qA1	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 (Nudt16l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			5330437I08Rik; 1110001K21Rik; Sdos	5330437I08Rik; 1110001K21Rik; Sdos
Mus musculus	MEEBO	ILMN_209425	ILMN_209425	A530080P10	scl24278.4.1_184				51709224	XM_485387	A530080P10		ILMN_1250980	000430673	S	1223	GAACAGGCTGCCCTGCTTTCAGACTGCGTTAATTTCAAGTCTTTTCAGGG										
Mus musculus	RefSeq	ILMN_196464	ILMN_196464	4930522N08RIK	XM_132190.2	XM_132190.2			38080330	XM_132190.2	4930522N08Rik		ILMN_1233710	005820717	S	742	GACATGCCCAGTTCAAGCCACTCTAGGTTCTCACTGGCAAATGGGTAGGC										
Mus musculus	RefSeq	ILMN_184819	ILMN_261121	LOC634327	XM_909026.3	XM_909026.3		634327	149259202	XM_909026.3	LOC634327	XP_914119.3	ILMN_1253028	000150392	S	3199	CAGGTCAAGTGACTGAGCACATTAGGTAGGAGACCATCGGATATGTACCC					PREDICTED: Mus musculus similar to bromodomain-containing protein BP75 (LOC634327), mRNA.					
Mus musculus	RefSeq	ILMN_209047	ILMN_209047	SPEN	NM_019763.2	NM_019763.2		56381	120587000	NM_019763.2	Spen	NP_062737.2	ILMN_2592059	003460605	S	10907	TCTCTGAAGGTGGTCCCCCACTGCGGATCGCCCAGAGGATGCGACTAGAG	4	-	141025766-141025815	4qE1	Mus musculus SPEN homolog, transcriptional regulator (Drosophila) (Spen), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Mint; mKIAA0929	Mint; mKIAA0929
Mus musculus	RefSeq	ILMN_214381	ILMN_214381	4632415K11RIK	NM_028883.2	NM_028883.2		74347	118130538	NM_028883.2	4632415K11Rik	NP_083159.1	ILMN_2647427	005270463	S	2524	CTTTACGGATCTGCTACAAGTTTTACTCTTGCATATACAGTTTGCCCATG	8	-	122284487-122284536	8qE1	Mus musculus RIKEN cDNA 4632415K11 gene (4632415K11Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_192715	ILMN_192715	KCNK18	NM_207261.3	NM_207261.3		332396	118131054	NM_207261.3	Kcnk18	NP_997144.1	ILMN_1227750	004890681	S	1160	GGGCATGGAGATCCTGTTCATTGCCTTCAAGCTGATGCAGAACCGGCTCC	19	+	59309988-59310037	19qD3	Mus musculus potassium channel, subfamily K, member 18 (Kcnk18), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]	Tresk; Trik; Tresk-2; Gm781	Tresk; Trik; Tresk-2; Gm781
Mus musculus	RefSeq	ILMN_221253	ILMN_221253	1110012J17RIK	NM_172963.3	NM_172963.3		68617	40217637	NM_172963.3	1110012J17Rik	NP_766551.2	ILMN_1257630	002000739	S	4873	CTGTTCCGTTCTGGTTGGGTTTCTCCATGTTGAGTTCGGAGTGTTCTAAG	17	-	66686868-66686917	17qE1.1	Mus musculus RIKEN cDNA 1110012J17 gene (1110012J17Rik), mRNA.				t8219b25; mKIAA0802; MGC77963; D130071O13	t8219b25; mKIAA0802; MGC77963; D130071O13
Mus musculus	Riken	ILMN_205403	ILMN_205403	E130001M03RIK	ri|E130001M03|PX00207D14|AK053253|2760					AK053253	E130001M03Rik		ILMN_2572293	000580092	S	2694	CAGTCCCACTAACACAGGGATTGCTGCTGCCTCTTGATCTGTGCTCCGAT										
Mus musculus	MEEBO	ILMN_214659	ILMN_214659	MOR253-5	scl31912.1.1_57				22129006	NM_146960	MOR253-5		ILMN_2650468	005310035	S	603	CTTGTGGCAGATGTCTTTCTGGGAGGCATCAACTTCATGTTAACCCTGTT										
Mus musculus	RefSeq	ILMN_255218	ILMN_255218	CLN6	NM_001033175.1	NM_001033175.1		76524	75677519	NM_001033175.1	Cln6	NP_001028347.1	ILMN_2946119	007000360	S	1624	CCCCATTTATATGCTGTTGAGAACCCAGTCTCCAGGGAGCCAGAGGCCCC	9	+	62649496-62649545	9qB	Mus musculus ceroid-lipofuscinosis, neuronal 6 (Cln6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence ISS]	Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement [goid 31987] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a macromolecule, any large molecule including proteins, nucleic acids and carbohydrates, as carried out by individual cells [goid 44265] [evidence IMP]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence ISS]; Any process that reduces the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion [goid 7042] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45862] [evidence ISS]; The chemical reactions and pathways involving ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1573] [evidence ISS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]	D9Bwg1455e; 1810065L06Rik; nclf; AW743417	D9Bwg1455e; 1810065L06Rik; nclf; AW743417
Mus musculus	Riken	ILMN_204299	ILMN_204299	A830089H10RIK	ri|A830089H10|PX00156J09|AK044093|2650					AK044093	A830089H10Rik		ILMN_2563912	005310626	S	2147	AAGGGGTCACTCCACTGCATCTGGCCTCACAAGAGGGGCACACAGACATG										
Mus musculus	MEEBO	ILMN_223858	ILMN_223858	ODF4	scl40049.5.1_114				21919407	NM_145746	Odf4		ILMN_2770515	000450703	S	1007	TTGCATTCCTCTTCCTCAACTTGGCTTTGTCTGTGGCTCAGGTGATGTGG						A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; Structure or material found in the flagella of mammalian sperm that surrounds each of the nine microtubule doublets, giving a 9 + 9 + 2 arrangement rather than the 9 + 2 pattern usually seen. These dense fibers are stiff and noncontractile [goid 1520] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_224070	ILMN_245415	OLFR1018	NM_146586.2	NM_146586.2		258579	121583728	NM_146586.2	Olfr1018	NP_666797.2	ILMN_1232618	003520156	S	803	CCAGGGCTGGTGGGAAGGTCATTGCAGTATTCTACACTGTAGTTACACCT	2	+	85663932-85663981	2qD	Mus musculus olfactory receptor 1018 (Olfr1018), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR260-5	MOR260-5
Mus musculus	RefSeq	ILMN_201498	ILMN_201498	LOC382192	XM_356299.1	XM_356299.1			38094861	XM_356299.1	LOC382192		ILMN_1241913	007040551	S	111	GTCTTTTCTCTTGTCCTCTCATCTGCAAGGTGTGGACTGCATGGCTGGGC										
Mus musculus	RefSeq	ILMN_213433	ILMN_247406	LARP7	NM_138593.2	NM_138593.2		28036	110665741	NM_138593.2	Larp7	NP_613059.2	ILMN_2637015	001450132	S	71	ACTCGAATGACGCAAATTTCCGCCGACCGCAGGGGTCGGGAGAAGGAAAG	3	-	127256147-127256196	3qG2	Mus musculus La ribonucleoprotein domain family, member 7 (Larp7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D3Wsu161e; C330027G06Rik	D3Wsu161e; C330027G06Rik
Mus musculus	RefSeq	ILMN_212325	ILMN_212325	GJA8	NM_008123.2	NM_008123.2		14616	58331132	NM_008123.2	Gja8	NP_032149.1	ILMN_2625168	002350687	S	974	CAAGCCTTTTAGTCAGTTTGAGGAGAAGATCGGCACAGGACCCCTGGCAG	3	-	96723315-96723364	3qF2.1	Mus musculus gap junction protein, alpha 8 (Gja8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]		Lop10; Cx50; Cnx50; Aey5	Lop10; Cx50; Cnx50; Aey5
Mus musculus	RefSeq	ILMN_214186	ILMN_242739	SVS6	NM_013679.2	NM_013679.2		20945	145046247	NM_013679.2	Svs6	NP_038707.2	ILMN_2771965	002340661	S	443	CATTTGGTTCTCAAACTTGTTTTTGAGATTTCTAAACCCGTGGTTATGAG	2	+	164144097-164144146	2qH3	Mus musculus seminal vesicle secretory protein 6 (Svs6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Svp6; MSVSP99	Svp6; MSVSP99
Mus musculus	RefSeq	ILMN_214728	ILMN_313812	LOC100048050	XR_034190.1	XR_034190.1		100048050	149251877	XR_034190.1	LOC100048050		ILMN_2651261	004760592	S	5764	CCAGTGTAAAGTTTAACACGGTTTGACAGTAAATAAATGTGAATTTTTTC					PREDICTED: Mus musculus similar to calcium-independent alpha-latrotoxin receptor homolog 2 (LOC100048050), misc RNA.					
Mus musculus	RefSeq	ILMN_197659	ILMN_197659	LOC380975	XM_354884.1	XM_354884.1			38077167	XM_354884.1	LOC380975		ILMN_2528904	004150600	S	423	ATGTACCCAAAAAGTAAAGCCAGAAGCTGGAAGCAAGGACGGCCGGCTCC										
Mus musculus	MEEBO	ILMN_209411	ILMN_209411	PDE6B	scl27464.21.1_10	NM_008806.1			6679254	NM_008806.1	Pde6b		ILMN_2595543	006980136	S	2536	CAGCACCCAAGTCCTCGACCTGCTGTATCCTATAAGCCGTGTTTCATGGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events in which a light stimulus (in the form of photons) is received and converted into a molecular signal [goid 9583] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222278	ILMN_222278	NCR1	NM_010746.3	NM_010746.3		17086	141801859	NM_010746.3	Ncr1	NP_034876.2	ILMN_2747294	006560041	S	1148	CTTTAACGCTTATTTACTGCAAGTTATACTTTTGATCACTCTGGTCTTTC	7	+	4296451-4296500	7qA1	Mus musculus natural cytotoxicity triggering receptor 1 (Ncr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NKp46; Ly94	NKp46; Ly94
Mus musculus	Riken	ILMN_203157	ILMN_203157	6720456J01RIK	ri|6720456J01|PX00059P05|AK032810|2754					AK032810	6720456J01Rik		ILMN_2555166	000870414	S	2390	GGGCTACATACATCCCCAGCCATGTATTGCAAGGGAAACTCGGGCTGTAG										
Mus musculus	Riken	ILMN_204784	ILMN_204784	ARHGAP6	ri|C130038E13|PX00169B11|AK048162|3127					AK048162	Arhgap6		ILMN_1250776	005090524	S	3045	GCACAAGCGGGTATCTGTGCTTTTTGCCATCACCTTTTAACTGGGGGCAG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]		
Mus musculus	RefSeq	ILMN_246116	ILMN_246116	GLE1	NM_028923.2	NM_028923.2		74412	118130556	NM_028923.2	Gle1	NP_083199.1	ILMN_3005546	001340221	S	2214	AGCAACTGGGACAGCGGGCTTGGAAGAATCATGTCAGATTGAGAAATTCG	2	+	29814076-29814125	2qB	Mus musculus GLE1 RNA export mediator (yeast) (Gle1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm [goid 16973] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4933405K21Rik; AA553313	4933405K21Rik; AA553313
Mus musculus	RefSeq	ILMN_199600	ILMN_199600	LOC383721	XM_357206.1	XM_357206.1			38074925	XM_357206.1	LOC383721		ILMN_1242363	002260368	S	570	GCTTTCAGAGAAACACTCACAGAACGGATACATTGTACCTCCCCCGCCAG										
Mus musculus	MEEBO	ILMN_189971	ILMN_189971	1700019H03RIK	scl071857.8_116						1700019H03Rik		ILMN_2466052	006380097	S	4	CTTGCAGACCCTGGTTCCCGCCCTGTGGATCTCTCAGCACTACTGATGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_236519	ILMN_236519	SMR1	NM_011422.1	NM_011422.1		20599	14389424	NM_011422.1	Smr1	NP_035552.1	ILMN_3125207	007610440	A	243	GGTCCAGGAATTGGTAGACCACCCCCTCCACCCTTTGGTCCAGGAATTGG	5	+	89082699-89082748	5qE1	Mus musculus submaxillary gland androgen regulated protein 1 (Smr1), mRNA.				MSG1; AA589601	MSG1; AA589601
Mus musculus	RefSeq	ILMN_218138	ILMN_218138	RPP30	NM_019428.2	NM_019428.2		54364	42476124	NM_019428.2	Rpp30	NP_062301.2	ILMN_1232428	003460743	S	628	CTGCTGTTTGGGCTTTCTGAAAATGATGGCAAGGCTGCCGTGTCCACAAA	19	+	36176315-36176364	19qC2	Mus musculus ribonuclease P/MRP 30 subunit (human) (Rpp30), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]	TSG15; Rnasep2	TSG15; Rnasep2
Mus musculus	RefSeq	ILMN_218138	ILMN_218138	RPP30	NM_019428.2	NM_019428.2		54364	42476124	NM_019428.2	Rpp30	NP_062301.2	ILMN_3007195	006110142	S	927	TAAAAACAACTTTATATTCAGACCATTAAAACAGCAAATAAAACCCAGTG	19	+	36179049-36179098	19qC2	Mus musculus ribonuclease P/MRP 30 subunit (human) (Rpp30), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]	TSG15; Rnasep2	TSG15; Rnasep2
Mus musculus	RefSeq	ILMN_194063	ILMN_247109	CETN1	NM_007593.5	NM_007593.5		26369	109148537	NM_007593.5	Cetn1	NP_031619.3	ILMN_2634059	006370538	S	508	GCGACGGAGAAGTGAACGAGGAAGAGTTTCTTAAGATCATGAAAAAGACC	18	-	9618910-9618959	18qA1	Mus musculus centrin 1 (Cetn1), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A 9+0 cilium that forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments [goid 32391] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a complex of G-protein beta/gamma subunits [goid 31683] [evidence IDA]	caltractin	caltractin
Mus musculus	RefSeq	ILMN_194063	ILMN_247109	CETN1	NM_007593.5	NM_007593.5		26369	109148537	NM_007593.5	Cetn1	NP_031619.3	ILMN_1241242	001990673	S	929	ACCAGAAAGTTCATTCTAGCTTTCCACTTAAGTGCATACTGCTCTGAAGG	18	-	9618489-9618538	18qA1	Mus musculus centrin 1 (Cetn1), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A 9+0 cilium that forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments [goid 32391] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a complex of G-protein beta/gamma subunits [goid 31683] [evidence IDA]	caltractin	caltractin
Mus musculus	Riken	ILMN_205514	ILMN_205514	D130056A19RIK	ri|D130056A19|PX00184H18|AK051550|4481					AK051550	D130056A19Rik		ILMN_1256323	005570390	S	3903	TACTACGGGGAATTTGAATGGGTTTCAGCTTGCACAGACTGCAGGCCTCT										
Mus musculus	RefSeq	ILMN_199094	ILMN_199094	LOC215948	XM_137067.5	XM_137067.5			38090881	XM_137067.5	LOC215948		ILMN_1253616	002570521	S	1059	CAGAGAGCCTCAAATGAAGGTCTGCAGTATGTCTGGGCAGAGAGTAGGGC										
Mus musculus	MEEBO	ILMN_190816	ILMN_190816	2900055J20RIK	scl52031.1.122_226						2900055J20Rik		ILMN_2473521	006060603	S	19	CCTTTACCTGTTTGGGATTTGACAAGACGTCCAGGCTCAGTGTGTGGCTG										
Mus musculus	RefSeq	ILMN_211277	ILMN_211277	CASC4	NM_177054.4	NM_177054.4		319996	142386893	NM_177054.4	Casc4	NP_796028.2	ILMN_2614203	005690193	S	1057	GATGAGAATGAATCCCCTGTTGATCCGCAGCATGGCTCTAAACTGGCGGA	2	+	121751308-121751357	2qE5	Mus musculus cancer susceptibility candidate 4 (Casc4), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			VGFG2573; D130060C09Rik	VGFG2573; D130060C09Rik
Mus musculus	RefSeq	ILMN_212789	ILMN_212789	CD276	NM_133983.3	NM_133983.3		102657	142362675	NM_133983.3	Cd276	NP_598744.1	ILMN_1259610	005860327	S	2926	TGGTGCTATTCTGGAGCTGGGATATATACCTGGCTTGTCTCTGACTGCCC	9	-	58372328-58372377	9qB	Mus musculus CD276 antigen (Cd276), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45077] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45077] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45085] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IMP]	AU016588; B7h3; B7RP-2; 6030411F23Rik	AU016588; B7h3; B7RP-2; 6030411F23Rik
Mus musculus	RefSeq	ILMN_251865	ILMN_251865	EG432985	NR_002868.1	NR_002868.1		432985	84872160	NR_002868.1	EG432985		ILMN_2913406	006900181	S	82	ACCAGGCTGCTGAAACAGTATCAGGAGCTCATGAATGTCAAGCTGGCCCG	15	-	101418872-101418921	15qF2	Mus musculus predicted gene, EG432985 (EG432985), non-coding RNA.				Kb17P	Kb17P
Mus musculus	MEEBO	ILMN_185514	ILMN_185514	F730031O20RIK	scl18269.2_626				28488799	XM_283813	F730031O20Rik		ILMN_1234703	005870243	S	15	CACAGCACTCATGATATCGTCGAAACGCATCAAAGTTGGACGATTCCCCC										
Mus musculus	MEEBO	ILMN_185514	ILMN_185514	F730031O20RIK	scl18269.2_626				28488799	XM_283813	F730031O20Rik		ILMN_2603976	002630605	S	3245	GTGTTACAAATCCTGTATTGATCTGTTCCCCTGCTCAGTTAGATTAGGTT										
Mus musculus	RefSeq	ILMN_199017	ILMN_199017	LOC215891	XM_137036.2	XM_137036.2			38090447	XM_137036.2	LOC215891		ILMN_1245776	002600750	S	641	GAGACACTGATCTGAGGATGCTTCACTTCCGTTTGGGTTATGCTGAGTTG										
Mus musculus	RefSeq	ILMN_207526	ILMN_207526	D16BWG1494E	XM_358773.6	XM_358773.6		224019	149267414	XM_358773.6	D16Bwg1494e	XP_358773.3	ILMN_2704318	002030110	S	1066	GTGGGCTTTGTGGGGAACATGCAGTAGATAAGGATTGCCCTGCTGAGTGG	16	+	17278654-17278703	16qA3	PREDICTED: Mus musculus DNA segment, Chr 16, Brigham & Women's Genetics 1494 expressed (D16Bwg1494e), mRNA.					
Mus musculus	MEEBO	ILMN_192081	ILMN_192081	D030074E01RIK	scl0319936.1_111						D030074E01Rik		ILMN_2484811	000130343	S	13	GGCTGGCATTTATTTAGTGTGTGCAATGCCTCATGTTTGAGTCCCAGTAC										
Mus musculus	RefSeq	ILMN_201035	ILMN_329435	LOC100039516	XM_001472820.1	XM_001472820.1		100039516	149273961	XM_001472820.1	LOC100039516	XP_001472870.1	ILMN_1228766	000830520	S	1153	TCATTCCAGAGACCCCTCTGGCTGAGGCGAGATCAGGTGATGAAAATGGC	Y|NT_166417.1	-	233733-233782		PREDICTED: Mus musculus similar to putative, transcript variant 1 (LOC100039516), mRNA.					
Mus musculus	MEEBO	ILMN_218117	ILMN_218117	5830432E09RIK	scl067765.1_16	XM_150021.1			20845730	XM_150021.1	5830432E09Rik		ILMN_1251971	006250333	S	1098	CCTGCCTTTTCTTCTGTGACGCAAAACTCATGCACACATAGGTTTGGTAA										
Mus musculus	MEEBO	ILMN_223821	ILMN_223821	2210013K02RIK	scl30691.10.4_70				12963794	NM_023712	2210013K02Rik		ILMN_2769893	000380202	S	2088	GAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTCTCTACTAGGAC										
Mus musculus	MEEBO	ILMN_194642	ILMN_194642	5730585A16RIK	scl9742.1.1_137						5730585A16Rik		ILMN_1230343	007320376	S	13	CTTCTGACTCTCCATGTGGGGGACACTATTGCCCCAGTACTTTAGCCCCC										
Mus musculus	RefSeq	ILMN_218311	ILMN_218311	DSC3	NM_007882.3	NM_007882.3		13507	133778946	NM_007882.3	Dsc3	NP_031908.3	ILMN_2694220	004150672	S	2614	CAGATACACATACTCAGAGTGGCACAGTTTCACTCAACCCCGACTTGGTG	18	-	20124130-20124179	18qA2	Mus musculus desmocollin 3 (Dsc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197635	ILMN_197635	LOC328522	XM_286664.2	XM_286664.2			38077021	XM_286664.2	LOC328522		ILMN_1248988	006250187	S	457	TGGCTTCCAGAGTCCAGACCCAGGTGGTCAAGAGGCATGGGGCCTGAAGT										
Mus musculus	RefSeq	ILMN_209043	ILMN_209043	9530058B02RIK	NM_026633.1	NM_026633.1		68241	13386123	NM_026633.1	9530058B02Rik	NP_080909.1	ILMN_2904819	002060088	S	696	CTGTCCCAAGCTGCCAGAGCCAGGAGCCAAACCTGTCTAACCTCAGTCCT	17	-	25591368-25591417	17qA3.3	Mus musculus RIKEN cDNA 9530058B02 gene (9530058B02Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217801	ILMN_217801	GLMN	NM_133248.1	NM_133248.1		170823	18875423	NM_133248.1	Glmn	NP_573511.1	ILMN_1233882	005290243	S	1816	TCAAATCAAAGTCTACCTCTGAAGAAAATGTTGGGATAAAGTAAAGGTTC	5	-	107978071-107978077:107978078-107978120	5qE5	Mus musculus glomulin, FKBP associated protein (Glmn), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISO]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence ISO]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]; Interacting selectively with the hepatocyte growth factor receptor [goid 5171] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC6885; 9330160J16Rik; Fap48; Fap68; AW227515	MGC6885; 9330160J16Rik; Fap48; Fap68; AW227515
Mus musculus	RefSeq	ILMN_217801	ILMN_217801	GLMN	NM_133248.1	NM_133248.1		170823	18875423	NM_133248.1	Glmn	NP_573511.1	ILMN_1220705	005670576	S	162	GCAGGTCAAAGATGCATTGAAGATGGTTATATAAACCAGCTGCTAGAGAT	5	-	108022793-108022842	5qE5	Mus musculus glomulin, FKBP associated protein (Glmn), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISO]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence ISO]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]; Interacting selectively with the hepatocyte growth factor receptor [goid 5171] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC6885; 9330160J16Rik; Fap48; Fap68; AW227515	MGC6885; 9330160J16Rik; Fap48; Fap68; AW227515
Mus musculus	RefSeq	ILMN_221439	ILMN_221439	A130014H13RIK	NM_176964.2	NM_176964.2		319630	31342481	NM_176964.2	A130014H13Rik	NP_795938.1	ILMN_2735626	002320707	S	805	CCCGCAGTAAAAGCCAAACAGCCATCAATCGCTCTCATTACTGGCTCTGG	12	-	108418578-108418627		Mus musculus RIKEN cDNA A130014H13 gene (A130014H13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212134	ILMN_212134	GPR173	NM_027543.3	NM_027543.3		70771	66793433	NM_027543.3	Gpr173	NP_081819.2	ILMN_1256819	001110523	S	3144	TTTTCTAACTGCCTGGATTCATCATTGGATTTTGTAAATGGAAAAAGTGA	X	-	148779209-148779258	XqF3	Mus musculus G-protein coupled receptor 173 (Gpr173), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	3230401K02Rik; Sreb3	3230401K02Rik; Sreb3
Mus musculus	MEEBO	ILMN_188782	ILMN_188782	TRAPPC6B	scl0002291.1_1	XM_127025.2			28521478	XM_127025.2	Trappc6b		ILMN_2485266	000290397	S	19	ATATATGAGAAAAACACCTTGATGGGCAAGCTGTGTCAGCTGCTGCCAGG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]			
Mus musculus	MEEBO	ILMN_188782	ILMN_188782	TRAPPC6B	scl0002291.1_1	XM_127025.2			28521478	XM_127025.2	Trappc6b		ILMN_2485267	001400082	S	20	TATATGAGAAAAACACCTTGATGGGCAAGCTGTGTCAGCTGCTGCCAGGA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]			
Mus musculus	RefSeq	ILMN_211843	ILMN_315134	D830050J10RIK	XR_035431.1	XR_035431.1		352968	149255717	XR_035431.1	D830050J10Rik		ILMN_2770607	000940440	S	1194	GTGCGTCTTCGTACAGCCCCCGTGGAATAGACACCTGGAGGGCAATGTGT				6qE3	PREDICTED: Mus musculus RIKEN cDNA D830050J10 gene (D830050J10Rik), misc RNA.					
Mus musculus	MEEBO	ILMN_223387	ILMN_223387	PYCS	scl52500.20.5_63				9790060	NM_019698	Pycs		ILMN_2777947	003190309	S	3016	CTCGACATGTAATTTCATTTCTTTTACGAAAGCTCGTCTTAAGGAGGGCT										
Mus musculus	RefSeq	ILMN_218739	ILMN_218739	1190017O12RIK	NM_138743.2	NM_138743.2		68936	124358928	NM_138743.2	1190017O12Rik	NP_620082.1	ILMN_2795854	007610703	S	185	CTGGCGGCAAAAACCCTGATCCTGTGCCTGGCCTTTGCGGGCGTGAAAAT	16	+	92311079-92311128	16qC4	Mus musculus RIKEN cDNA 1190017O12 gene (1190017O12Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C21orf51	C21orf51
Mus musculus	RefSeq	ILMN_209484	ILMN_209484	AGGF1	NM_025630.2	NM_025630.2		66549	34328274	NM_025630.2	Aggf1	NP_079906.2	ILMN_2596231	003800546	S	2128	ACAAAGGCCGAAAGATGTTGGAGAAGATGGGGTGGAAACGGGGAGAAGGC	13	-	96122735-96122784	13qD1	Mus musculus angiogenic factor with G patch and FHA domains 1 (Aggf1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	VG5Q; AW112072; 2310029P06Rik; 2010009L17Rik; Peg3	VG5Q; AW112072; 2310029P06Rik; 2010009L17Rik; Peg3
Mus musculus	RefSeq	ILMN_209484	ILMN_209484	AGGF1	NM_025630.2	NM_025630.2		66549	34328274	NM_025630.2	Aggf1	NP_079906.2	ILMN_2660898	006660017	S	1654	GACCATGACTTGCAAAGCTACGTTCTTGTGGATCAGGGCAGCCAGAATGG	13	-	96128695-96128744	13qD1	Mus musculus angiogenic factor with G patch and FHA domains 1 (Aggf1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	VG5Q; AW112072; 2310029P06Rik; 2010009L17Rik; Peg3	VG5Q; AW112072; 2310029P06Rik; 2010009L17Rik; Peg3
Mus musculus	RefSeq	ILMN_209484	ILMN_209484	AGGF1	NM_025630.2	NM_025630.2		66549	34328274	NM_025630.2	Aggf1	NP_079906.2	ILMN_2858324	004730646	S	2956	GTTTGTACTACAGAGTCAGCTTTGCCTTTGGTTTGTCCTAGCTGATGGAG	13	-	96120863-96120912	13qD1	Mus musculus angiogenic factor with G patch and FHA domains 1 (Aggf1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	VG5Q; AW112072; 2310029P06Rik; 2010009L17Rik; Peg3	VG5Q; AW112072; 2310029P06Rik; 2010009L17Rik; Peg3
Mus musculus	RefSeq	ILMN_209484	ILMN_209484	AGGF1	NM_025630.2	NM_025630.2		66549	34328274	NM_025630.2	Aggf1	NP_079906.2	ILMN_1249270	005570446	S	2130	CAAAGGCCGAAAGATGTTGGAGAAGATGGGGTGGAAACGGGGAGAAGGCC	13	-	96122733-96122782	13qD1	Mus musculus angiogenic factor with G patch and FHA domains 1 (Aggf1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	VG5Q; AW112072; 2310029P06Rik; 2010009L17Rik; Peg3	VG5Q; AW112072; 2310029P06Rik; 2010009L17Rik; Peg3
Mus musculus	RefSeq	ILMN_209484	ILMN_209484	AGGF1	NM_025630.2	NM_025630.2		66549	34328274	NM_025630.2	Aggf1	NP_079906.2	ILMN_2603559	006980424	S	838	TCCTCGCTTGCTGAGAGCTTGAGAGCTGCAGCGGAGGCTGCTGTGTCGCA	13	-	96139421-96139470	13qD1	Mus musculus angiogenic factor with G patch and FHA domains 1 (Aggf1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	VG5Q; AW112072; 2310029P06Rik; 2010009L17Rik; Peg3	VG5Q; AW112072; 2310029P06Rik; 2010009L17Rik; Peg3
Mus musculus	RefSeq	ILMN_201692	ILMN_227739	LOC674019	XM_001006904.1	XM_001006904.1		674019	94412097	XM_001006904.1	LOC674019	XP_001006904.1	ILMN_2543830	000270154	S	714	CTGGGAGAAGGGGCGTGGGGGTGTGTGTCCCACTGTCATGTAAATATCCC					PREDICTED: Mus musculus similar to SET translocation (LOC674019), mRNA.					
Mus musculus	RefSeq	ILMN_216704	ILMN_216704	0610010K14RIK	NM_026757.1	NM_026757.1		104457	21389317	NM_026757.1	0610010K14Rik	NP_081033.1	ILMN_2674228	002690324	S	318	ATGACGTCCGGTGTCCTCTCACCTCCAAACGCCCCTCCACCCAGCAGCTC	11	-	70051096-70051106:70051033-70051071	11qB3	Mus musculus RIKEN cDNA 0610010K14 gene (0610010K14Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AL033328; RP23-198E14.7; AU045833; 1110020A23Rik	AL033328; RP23-198E14.7; AU045833; 1110020A23Rik
Mus musculus	RefSeq	ILMN_198819	ILMN_258440	BC049730	NM_199150.1	NM_199150.1		232972	59933291	NM_199150.1	BC049730	NP_954601.1	ILMN_2533040	004920278	S	241	TGGGCTTCTGCCCCTGCTCAGATACTCTGAACTGTCAGGAAGGATCCGTG	7	+	25495220-25495240:25497480-25497508	7qA3	Mus musculus cDNA sequence BC049730 (BC049730), mRNA.				MGC58740	MGC58740
Mus musculus	RefSeq	ILMN_258440	ILMN_258440	BC049730	NM_199150.1	NM_199150.1		232972	59933291	NM_199150.1	BC049730	NP_954601.1	ILMN_2907915	004850253	S	665	CCATACCTTGTGCCCTAAGGACACGAAATGCTATGCAGCTTCCTTGGGAG	7	+	25498744-25498793	7qA3	Mus musculus cDNA sequence BC049730 (BC049730), mRNA.				MGC58740	MGC58740
Mus musculus	RefSeq	ILMN_223781	ILMN_223781	PYGM	NM_011224.1	NM_011224.1		19309	6755255	NM_011224.1	Pygm	NP_035354.1	ILMN_1220498	006370484	S	2674	TACCCTACCCACTTTGGAACCCACTTTCCCCAGTCTCTAGGTCCTGATGC	19	+	6388149-6388174:6388179-6388202	19qA	Mus musculus muscle glycogen phosphorylase (Pygm), mRNA.	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISO]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5980] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate [goid 8184] [evidence IDA]; Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate. The name should be qualified in each instance by adding the name of the natural substrate, e.g. maltodextrin phosphorylase, starch phosphorylase, glycogen phosphorylase [goid 4645] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	AI115133	AI115133
Mus musculus	RefSeq	ILMN_262004	ILMN_262004	OLFR288	NM_001011733.2	NM_001011733.2		545140	111185919	NM_001011733.2	Olfr288	NP_001011733.2	ILMN_2902605	006290270	S	1847	CTGAGGTTGGGAAATCCACACTACAAGTAGGCAGGACCATTCCTGGTTCC	15	-	98016630-98016679	15qF1	Mus musculus olfactory receptor 288 (Olfr288), mRNA. XM_914933 XM_923467	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR286-3P; GA_x5J8B7W76D0-7609197-7608973	MOR286-3P; GA_x5J8B7W76D0-7609197-7608973
Mus musculus	RefSeq	ILMN_219598	ILMN_239386	PERLD1	NM_001033537.2	NM_001033537.2		320655	114326507	NM_001033537.2	Perld1	NP_001028709.2	ILMN_2711000	001260612	S	2106	TTGGGATGGTGGACCTCCCACTCAGTTCCCTTTGTCAGAGCTGGACTCTC	11	-	98250254-98250303	11qD	Mus musculus per1-like domain containing 1 (Perld1), mRNA. XM_923653	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]		CAB2; D430035D22Rik	CAB2; D430035D22Rik
Mus musculus	RefSeq	ILMN_223635	ILMN_223635	SLC22A7	NM_144856.1	NM_144856.1		108114	21450072	NM_144856.1	Slc22a7	NP_659105.1	ILMN_2766867	003520332	S	1834	CCTCTCATGGTGGCGGTGGGTGGGGGACTTCTGTAAATAAAGATAGATGC	17	-	46569211-46569260	17qC	Mus musculus solute carrier family 22 (organic anion transporter), member 7 (Slc22a7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence TAS]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IDA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence TAS]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	NLT; OAT2; MGC18877	NLT; OAT2; MGC18877
Mus musculus	RefSeq	ILMN_231859	ILMN_231859	SPAG7	NM_172561.1	NM_172561.1		216873	27369785	NM_172561.1	Spag7	NP_766149.1	ILMN_2830771	000770482	S	615	GGTCCATAGAGGAGGCCATGAATGAGATCAGAGCCAAGAAACGCCTGCGG	11	-	70480337-70480386	11qB3	Mus musculus sperm associated antigen 7 (Spag7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Fsa1l; ACRP; FSA-1; 5730443G10; MGC67704	Fsa1l; ACRP; FSA-1; 5730443G10; MGC67704
Mus musculus	RefSeq	ILMN_212570	ILMN_212570	MOBKL2A	NM_172457.2	NM_172457.2		208228	124249074	NM_172457.2	Mobkl2a	NP_766045.2	ILMN_3008924	003370309	S	2459	CCCGAAGTCACTGTGCCCAATACCCAGCTCTGGAAGAATCAGGGACCAGC	10	-	80148136-80148185	10qC1	Mus musculus MOB1, Mps One Binder kinase activator-like 2A (yeast) (Mobkl2a), mRNA. XM_618785 XM_923737			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A630029F06; 5330417K06Rik	A630029F06; 5330417K06Rik
Mus musculus	RefSeq	ILMN_203482	ILMN_212570	MOBKL2A	NM_172457.2	NM_172457.2		208228	124249074	NM_172457.2	Mobkl2a	NP_766045.2	ILMN_2557635	006290156	S	928	GGGCCTGAACTTGAACCTGGACACTGTGCTTTCAGCCACTGGGTTTACAC	10	-	80149667-80149716	10qC1	Mus musculus MOB1, Mps One Binder kinase activator-like 2A (yeast) (Mobkl2a), mRNA. XM_618785 XM_923737			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A630029F06; 5330417K06Rik	A630029F06; 5330417K06Rik
Mus musculus	RefSeq	ILMN_213113	ILMN_261770	IL31	XM_915437.2	XM_915437.2		76399	94375426	XM_915437.2	Il31	XP_920530.1	ILMN_1240632	007610048	S	471	TCGTGCTTACGGTTTTAAAGCAGTTCTCAAACTGCATGGCAGAACTGCAG				5qF	PREDICTED: Mus musculus interleukin 31 (Il31), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]		
Mus musculus	MEEBO	ILMN_222019	ILMN_222019	1700112H15RIK	scl15813.6.1_156	XM_149010.2			38073661	XM_149010.2	1700112H15Rik		ILMN_2743541	001660280	S	592	TGCCAAGTGCCTTCCACAGTGGATTTTATCCTCTAAAACTAAATAAACTC										
Mus musculus	RefSeq	ILMN_209970	ILMN_209970	PCDHB15	NM_053140.3	NM_053140.3		93886	148613872	NM_053140.3	Pcdhb15	NP_444370.1	ILMN_2600952	005130605	S	2459	CCAGTGAATTTAAGTTTCTAAGTCCAATTGCCTCTAACTTCCTAACCGAA				18qB3	Mus musculus protocadherin beta 15 (Pcdhb15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbO; Pcdhb7	PcdhbO; Pcdhb7
Mus musculus	RefSeq	ILMN_206497	ILMN_317669	D430020J02RIK	XM_001478239.1	XM_001478239.1		319545	149263562	XM_001478239.1	D430020J02Rik	XP_001478289.1	ILMN_1221215	001470180	S	2665	ATAAGCCTTAAGAGAGTTTCGGTCGGGGGTCGAACTCCTCTACCCCTGCC	12	-	117640948-117640997	12qF2	PREDICTED: Mus musculus RIKEN cDNA D430020J02 gene (D430020J02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_184229	ILMN_317669	D430020J02RIK	XM_001478239.1	XM_001478239.1		319545	149263562	XM_001478239.1	D430020J02Rik	XP_001478289.1	ILMN_2416919	000780739	S	2983	CCCCAGGGGAAGCCAGCCTTCCCGACATAGGACAGATGACTGTTTACTAC	12	-	117640630-117640679	12qF2	PREDICTED: Mus musculus RIKEN cDNA D430020J02 gene (D430020J02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196589	ILMN_196589	DEFCR-RS12	NM_007846.1	NM_007846.1		13221	6681164	NM_007846.1	Defcr-rs12	NP_031872.1	ILMN_2718782	001980717	S	165	AGATGCAGCAGCCATAAGAAGGGCTCGCCGGTGCCCACCATGCCCCAGTT					Mus musculus defensin related cryptdin, related sequence 12 (Defcr-rs12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]		CRS4C-5	CRS4C-5
Mus musculus	RefSeq	ILMN_196589	ILMN_196589	DEFCR-RS12	NM_007846.1	NM_007846.1		13221	6681164	NM_007846.1	Defcr-rs12	NP_031872.1	ILMN_2524940	006250445	S	167	ATGCAGCAGCCATAAGAAGGGCTCGCCGGTGCCCACCATGCCCCAGTTGC					Mus musculus defensin related cryptdin, related sequence 12 (Defcr-rs12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]		CRS4C-5	CRS4C-5
Mus musculus	MEEBO	ILMN_219463	ILMN_219463	ARHGEF10	scl000627.1_17	NM_172751.1			27370103	NM_172751.1	Arhgef10		ILMN_2709223	002510692	S	715	GTGAGGAAAAGATGAGAGGCTTGGTGGCCAGTACGGTGGGAGCCATGGAG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198331	ILMN_198331	LOC243753	XM_145241.2	XM_145241.2			38083926	XM_145241.2	LOC243753		ILMN_1246114	006250091	S	1267	CTGGAGGAATTGTGCCTTCTGCTCCCGAACCCCAAGTGACCCGTGCTACT										
Mus musculus	RefSeq	ILMN_215115	ILMN_215115	CFB	NM_008198.1	NM_008198.1		14962	6996918	NM_008198.1	Cfb	NP_032224.1	ILMN_1230853	005260541	S	2364	CAAGCTCAAAGATGAGGATTTGGGTTTTCTATAAAGAGCTTCCTGCAGGG	17	-	34996513-34996518:34996407-34996450	17qB1	Mus musculus complement factor B (Cfb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway [goid 6956] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence TAS]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	H2-Bf; FB; Bf; AI195813; B; AI255840	H2-Bf; FB; Bf; AI195813; B; AI255840
Mus musculus	Riken	ILMN_205793	ILMN_205793	E030024C07RIK	ri|E030024C07|PX00206E17|AK053168|1142					AK053168	E030024C07Rik		ILMN_1255430	004920246	S	915	CATCGAGACATGGGAGAGCAGCGACCCCTGGCGAGCGATTTGAGGAGTCT										
Mus musculus	MEEBO	ILMN_217432	ILMN_217432	ARHGEF2	scl016800.23_0				47271403	NM_008487	Arhgef2		ILMN_1248202	004880139	S	1710	GACATAGCCAACCAGGCGAAAGGGATGTTTCTGATTAGTTCTGGACCGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IPI]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IDA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]		
Mus musculus	MEEBO	ILMN_209472	ILMN_209472	9930104L06RIK	scl0194268.3_153	NM_177573.2			31341483	NM_177573.2	9930104L06Rik		ILMN_1230993	005550440	S	963	GGACTGTGTGTCCGGGACCTTGTACACCTCTGCCTTATACCTGTCTATGC										
Mus musculus	RefSeq	ILMN_200456	ILMN_200456	LOC384302	XM_358740.1	XM_358740.1			38082027	XM_358740.1	LOC384302		ILMN_1252075	007320400	S	266	GGCCTCAGTGTGGACTGCCATCTGCAGGCTATGTCGTGGAGAACACTGTT										
Mus musculus	RefSeq	ILMN_233949	ILMN_233949	MAP3K6	NM_016693.3	NM_016693.3		53608	66392594	NM_016693.3	Map3k6	NP_057902.3	ILMN_2947292	007200025	S	4062	ATGGTATGCCGGATTTGGAGAGCCATCTTGGCACAGCGAGCAGGAGCCAC	4	+	132808572-132808621	4qD2.3	Mus musculus mitogen-activated protein kinase kinase kinase 6 (Map3k6), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]	MGC159280; MAPKKK6	MGC159280; MAPKKK6
Mus musculus	RefSeq	ILMN_217672	ILMN_225228	A630055G03RIK	NM_001033278.1	NM_001033278.1		223970	85701779	NM_001033278.1	A630055G03Rik	NP_001028450.1	ILMN_2686197	004900543	S	839	TACAAGCAAACGGCTGAGCAGCTGGTGGACGGGAGTCCTGAGAGGCAGAA	16	+	10891415-10891464	16qA1	Mus musculus RIKEN cDNA A630055G03 gene (A630055G03Rik), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Gm537; Gm929	Gm537; Gm929
Mus musculus	Riken	ILMN_204808	ILMN_204808	TRIM2	ri|A330102G01|PX00063J21|AK039741|2435					AK039741	Trim2		ILMN_1234848	002470092	S	2244	AACAGTGCCTAAGACCTCTGGGTGGAGAAGGAAATGGGTTTGGGCGGGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]		
Mus musculus	RefSeq	ILMN_217479	ILMN_217479	CADM3	NM_053199.3	NM_053199.3		94332	56699416	NM_053199.3	Cadm3	NP_444429.1	ILMN_1254663	000580673	S	3932	GGTACTCATCCGAGAGGGTTAATGGGAACCCACATATTGAACATGTATCC	1	-	175264562-175264611	1qH3	Mus musculus cell adhesion molecule 3 (Cadm3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	SynCAM3; Necl1; Igsf4b; Necl-1; Tsll1; BIgR	SynCAM3; Necl1; Igsf4b; Necl-1; Tsll1; BIgR
Mus musculus	MEEBO	ILMN_217557	ILMN_217557	MARCO	scl16373.17.1_56	NM_010766.1			6754639	NM_010766.1	Marco		ILMN_1229922	002850626	S	1803	GAACTCCTGGGGCAATCACAATTGCGTACATAATGAAGATGCGGGTGTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210396	ILMN_210396	HOOK1	NM_030014.2	NM_030014.2		77963	40254145	NM_030014.2	Hook1	NP_084290.1	ILMN_2629755	006450131	S	677	AGGAGGCCATAGCAGAAAAGGAAGAGCTGAAGCAGAGGTGCCAGGAACTG	4	+	95665410-95665459	4qC5	Mus musculus hook homolog 1 (Drosophila) (Hook1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]	azh; A930033L17Rik	azh; A930033L17Rik
Mus musculus	RefSeq	ILMN_210396	ILMN_210396	HOOK1	NM_030014.2	NM_030014.2		77963	40254145	NM_030014.2	Hook1	NP_084290.1	ILMN_2605203	005390053	S	1795	CCATGAAGAATTACAGAAGAAACAGGAGCTCATTGAAGACCTTCAGCCAG	4	+	95683652-95683701	4qC5	Mus musculus hook homolog 1 (Drosophila) (Hook1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]	azh; A930033L17Rik	azh; A930033L17Rik
Mus musculus	RefSeq	ILMN_210396	ILMN_210396	HOOK1	NM_030014.2	NM_030014.2		77963	40254145	NM_030014.2	Hook1	NP_084290.1	ILMN_2642093	002000328	S	1991	CCAGCATCAGCAGAAATAATGTTACTCAGAAAGCAGCTGGCGGAGAAGGA	4	+	95686324-95686373	4qC5	Mus musculus hook homolog 1 (Drosophila) (Hook1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]	azh; A930033L17Rik	azh; A930033L17Rik
Mus musculus	RefSeq	ILMN_210396	ILMN_210396	HOOK1	NM_030014.2	NM_030014.2		77963	40254145	NM_030014.2	Hook1	NP_084290.1	ILMN_1247295	001500021	S	679	GGAGGCCATAGCAGAAAAGGAAGAGCTGAAGCAGAGGTGCCAGGAACTGG	4	+	95665412-95665461	4qC5	Mus musculus hook homolog 1 (Drosophila) (Hook1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]	azh; A930033L17Rik	azh; A930033L17Rik
Mus musculus	RefSeq	ILMN_215154	ILMN_215154	HIGD1B	NM_080846.1	NM_080846.1		75689	18252785	NM_080846.1	Higd1b	NP_543122.1	ILMN_2852925	003930114	S	491	GCAGCATACAGGATTTACCGGCTGAAGGCTCGGGGTTCTACCAAGCTCTC	11	+	102698571-102698620	11qE1	Mus musculus HIG1 domain family, member 1B (Higd1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2310056K19Rik; RP23-463E7.1	2310056K19Rik; RP23-463E7.1
Mus musculus	RefSeq	ILMN_211671	ILMN_211671	SCNN1B	NM_011325.1	NM_011325.1		20277	6755411	NM_011325.1	Scnn1b	NP_035455.1	ILMN_2618383	007210600	S	2226	CTCCTGGTTGATAGGCCACTTTCCTGTCTGTTACCACCTCAGTCTCCCAG	7	+	129061847-129061896	7qF2	Mus musculus sodium channel, nonvoltage-gated 1 beta (Scnn1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA];  [goid 15280] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216512	ILMN_216512	2700060E02RIK	NM_026528.3	NM_026528.3		68045	84370362	NM_026528.3	2700060E02Rik	NP_080804.1	ILMN_1225213	003840070	S	918	GGAGAACCCCAGGAGATTGACTATGTTCTAGAGATTTACCACCGCTGCTT	14	-	20631166-20631215	14qA3	Mus musculus RIKEN cDNA 2700060E02 gene (2700060E02Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211992	ILMN_216512	2700060E02RIK	NM_026528.3	NM_026528.3		68045	84370362	NM_026528.3	2700060E02Rik	NP_080804.1	ILMN_2621544	005960066	S	1210	CCCTCAAAAGTACTCCGGGTAAAACACCAAAGATGCAGCAGTTCTTCAAT	14	-	20630874-20630923	14qA3	Mus musculus RIKEN cDNA 2700060E02 gene (2700060E02Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	MEEBO	ILMN_195457	ILMN_195457	1110054H05RIK	scl0068837.1_84				51766584	XM_126489	1110054H05Rik		ILMN_2515726	006840615	S	12	GCTGCCAAGGAGAGGGCAGAAGCTGGACCCTTAGGTTATTAACTGAGTAC										
Mus musculus	RefSeq	ILMN_212923	ILMN_212923	4930444A02RIK	NM_029037.2	NM_029037.2		74653	31541969	NM_029037.2	4930444A02Rik	NP_083313.1	ILMN_2631674	005490711	S	3199	CGCTGGCATTGTCTCCGTCTTCTGTACCCCGTGGCTGATTGGAGGGTGAA	8	-	27446501-27446550	8qA2	Mus musculus RIKEN cDNA 4930444A02 gene (4930444A02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209789	ILMN_209789	SCRG1	NM_009136.3	NM_009136.3		20284	119226218	NM_009136.3	Scrg1	NP_033162.1	ILMN_2599233	001030743	S	492	GATCCCCTGCAACAACCACTGAGGATCTGCCTTGCACTCTGGAGAACATG	8	+	59956174-59956195:59956196-59956223	8qB2	Mus musculus scrapie responsive gene 1 (Scrg1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AW124307	AW124307
Mus musculus	RefSeq	ILMN_224213	ILMN_241733	IL1F10	NM_153077.2	NM_153077.2		215274	118130161	NM_153077.2	Il1f10	NP_694717.1	ILMN_2776687	001740431	S	470	TTTGAGATGAGTCGGTAAAGAGACATAAGGCTGGGGCCTCGTCTAGTGCC	2	+	24149272-24149289:24149290-24149321	2qA3	Mus musculus interleukin 1 family, member 10 (Il1f10), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Blocks the binding of interleukin-1 to the interleukin-1 receptor complex [goid 5152] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]	MGC130268; MGC130267	MGC130268; MGC130267
Mus musculus	RefSeq	ILMN_222318	ILMN_222318	HN1L	NM_198937.2	NM_198937.2		52009	118130913	NM_198937.2	Hn1l	NP_945175.1	ILMN_2851251	000050609	S	2005	CTGCATCCTACCCGGTCTGTTGAGGGCTCTGACCATGGCTTTATCAACCA	17	-	25080697-25080746	17qA3.3	Mus musculus hematological and neurological expressed 1-like (Hn1l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2810430B18Rik; AL022629; C16orf34; D17Ertd441e	2810430B18Rik; AL022629; C16orf34; D17Ertd441e
Mus musculus	RefSeq	ILMN_210390	ILMN_210390	HES1	NM_008235.2	NM_008235.2		15205	31560817	NM_008235.2	Hes1	NP_032261.1	ILMN_1247691	004230356	S	950	CTTCGCTCACAGCGGCCCGGTCATCCCGGTCTACACCAGCAACAGTGGGA	16	+	30067381-30067430	16qB2	Mus musculus hairy and enhancer of split 1 (Drosophila) (Hes1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IGI]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of auditory hair cell differentiation [goid 45608] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into an auditory hair cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 42668] [evidence IMP]; The process controlling the timing and/or rate at which relatively unspecialized cells acquire specialized features [goid 48505] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; The process controlling the timing and/or rate at which a relatively unspecialized cell acquires features of a neuron [goid 60164] [evidence IMP]; The process by which the anatomical structure of the hindbrain is generated and organized. Morphogenesis pertains to the creation of form. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions [goid 21575] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process by which the anatomical structure of the midbrain-hindbrain boundary is generated and organized. Morphogenesis pertains to the creation of form. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate [goid 21555] [evidence IGI]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; The process by which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron [goid 48667] [evidence IGI]; The process whose specific outcome is the progression of the oculomotor nerve over time, from its formation to the mature structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle [goid 21557] [evidence IGI]; The process controlling the timing and/or rate at which a relatively unspecialized cell acquires features of a neuron [goid 60164] [evidence IGI]; The process whose specific outcome is the progression of the trochlear nerve over time, from its formation to the mature structure. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle [goid 21558] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Hry	Hry
Mus musculus	RefSeq	ILMN_218405	ILMN_218405	AI451617	NM_199146.1	NM_199146.1		209387	40255280	NM_199146.1	AI451617	NP_954597.1	ILMN_2695412	004390576	S	1711	CACCTATACCTGTGCAGTGCCCCCATGTCTCCGCTGCATCATTCTAACTT	7	-	111620501-111620550	7qE3	Mus musculus expressed sequence AI451617 (AI451617), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220136	ILMN_220136	OLFR803	NM_146554.1	NM_146554.1		258547	22129526	NM_146554.1	Olfr803	NP_666765.1	ILMN_2718049	000130411	S	779	CTTCAGCAAATGAAAGAGCATCATTGACCAAAACAGTAGCTATTCTCAGC	10	-	129128267-129128316	10qD3	Mus musculus olfactory receptor 803 (Olfr803), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR111-3	MOR111-3
Mus musculus	RefSeq	ILMN_197848	ILMN_238053	LOC665683	XM_978724.1	XM_978724.1		665683	94372597	XM_978724.1	LOC665683	XP_983818.1	ILMN_2529578	004260129	S	163	CTCCGGTACCCGGGATCCTTCAGTGCCTAGGGGAGAAAGGAGACCTGCTT	4	-	138631170-138631219	4qD3	PREDICTED: Mus musculus hypothetical LOC665683 (LOC665683), mRNA.					
Mus musculus	RefSeq	ILMN_229834	ILMN_229834	PSG26	NM_001029893.1	NM_001029893.1		574429	71274189	NM_001029893.1	Psg26	NP_001025064.1	ILMN_2794347	006250521	S	1920	GAGAGTACATACCATGCATTCCATTTTGGTACTGGGTTACTTCACTAAGG	7	-	19060019-19060068	7qA2	Mus musculus pregnancy-specific glycoprotein 26 (Psg26), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		MGC117568	MGC117568
Mus musculus	RefSeq	ILMN_198649	ILMN_198649	LOC330517	XM_286017.2	XM_286017.2			38086662	XM_286017.2	LOC330517		ILMN_1222233	001740768	S	796	CCTAGAAAGCCGAGTCTTCCACAGACTGTTACCTTAGGTCCACCTGGTAC										
Mus musculus	MEEBO	ILMN_224236	ILMN_224236	SPEER4C	scl0066773.1_257				51782650	XM_486542	Speer4c		ILMN_1245154	001410605	S	257	CGTGACCGAGGGATCCATGAACAAGAGGCCCTACCACAGGCAAAATACCC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_216406	ILMN_216406	TRIAP1	NM_026933.2	NM_026933.2		69076	142344163	NM_026933.2	Triap1	NP_081209.1	ILMN_1233160	004540538	S	675	GATTGTAGTTTTATAATAACACTTCCAACTGCTGGTGGCCTGGGTTATGG	5	+	115793187-115793236	5qF	Mus musculus TP53 regulated inhibitor of apoptosis 1 (Triap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		AU020874; AU043831; P53csv; 1810015M01Rik; Wf-1	AU020874; AU043831; P53csv; 1810015M01Rik; Wf-1
Mus musculus	RefSeq	ILMN_226745	ILMN_226745	EG384814	NM_001079931.1	NM_001079931.1		384814	121247242	NM_001079931.1	EG384814	NP_001073400.1	ILMN_2965752	006420273	S	181	TCCTATAGCCTGAACATTGGGGGGCAGAGGCACATAATCACTATGAAACC	8	-	44761085-44761134	8qA4	Mus musculus predicted gene, EG384814 (EG384814), mRNA.					
Mus musculus	Riken	ILMN_206529	ILMN_206529	PTPN14	ri|D930033J18|PX00202D06|AK086515|3812					AK086515	Ptpn14		ILMN_1234728	003940239	S	3576	TGGGAATCAACCCAGAGGGAGGACGTGAAGGCCGGTTTTACAGAGGCCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_239545	ILMN_239545	AGTPBP1	NM_001048008.1	NM_001048008.1		67269	114158682	NM_001048008.1	Agtpbp1	NP_001041473.1	ILMN_3117612	000840370	A	1149	TCCACTTCCAATTGCCAATTATCCCTGTGACTGGACCTGTGGCCCAGCTC	13	-	59613703-59613752	13qB2	Mus musculus ATP/GTP binding protein 1 (Agtpbp1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IGI]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	BB114605; Nna1; 1700020N17Rik; MGC90651; 2900054O13Rik; 5730402G09Rik; nmf243; pcd; mKIAA1035; 4930445M19Rik	BB114605; Nna1; 1700020N17Rik; MGC90651; 2900054O13Rik; 5730402G09Rik; nmf243; pcd; mKIAA1035; 4930445M19Rik
Mus musculus	MEEBO	ILMN_193155	ILMN_193155	5430417L22RIK	scl20442.1.104_164						5430417L22Rik		ILMN_1226555	006770075	S	12	CACTCGTGGTCCAGCTGGCCTCCTGACTCTATAAGCCTTCACTGGAATCG										
Mus musculus	RefSeq	ILMN_198586	ILMN_256797	PRRG3	NM_001081135.1	NM_001081135.1		208748	124487490	NM_001081135.1	Prrg3	NP_001074604.1	ILMN_1241345	000060612	S	606	CCAGACTATCCAGTGCTACCCCTCCCCCTTCCTATGAGGAGGTGACTGCA	X	+	69212775-69212824	XqA7.3	Mus musculus proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane) (Prrg3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Gm368	Gm368
Mus musculus	Riken	ILMN_206817	ILMN_206817	D930024N12RIK	ri|D930024N12|PX00202H01|AK086384|2610					AK086384	D930024N12Rik		ILMN_1249601	005890746	S	2526	CACTGGGGGGGGGGGGCTAAGAAATGGTAATGGATTTGGGGGTGAATAAG										
Mus musculus	Riken	ILMN_205256	ILMN_205256	E230013M07RIK	ri|E230013M07|PX00210M05|AK054036|1742					AK054036	E230013M07Rik		ILMN_1244448	000430397	S	1640	GCAATGGGGTGCTTGGCAGATGTTCTGTGTTTTCCAGGATTCCAACTGAG										
Mus musculus	RefSeq	ILMN_211634	ILMN_211634	DGCR8	NM_033324.2	NM_033324.2		94223	41152098	NM_033324.2	Dgcr8	NP_201581.2	ILMN_1226133	002320709	S	4021	GGTAATGGTGGTATCTCTGCAGCCTCACCGACCCAGGCACTGTCAACAGG	16	-	18277290-18277339	16qA3	Mus musculus DiGeorge syndrome critical region gene 8 (Dgcr8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule [goid 31053] [evidence ISO]	Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D16H22S1742E; D16H22S788E; Gy1; N41; D16Wis2	D16H22S1742E; D16H22S788E; Gy1; N41; D16Wis2
Mus musculus	RefSeq	ILMN_220991	ILMN_220991	SYTL3	NM_183367.1	NM_183367.1		83672	34368577	NM_183367.1	Sytl3	NP_899223.1	ILMN_2729588	005570524	S	819	CGCGAGACCGCTGGGGCAAAGCTCCTGCAATCTTATCAGAGGCTGAGCAA	17	+	6904006-6904053:6905587-6905588	17qA1	Mus musculus synaptotagmin-like 3 (Sytl3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IDA]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]	A430092N21; Slp3-b; Slp3-a; Slp3; mFLJ00307; MGC117869	A430092N21; Slp3-b; Slp3-a; Slp3; mFLJ00307; MGC117869
Mus musculus	MEEBO	ILMN_222058	ILMN_222058	METTL4	scl076781.2_11	XM_135413.4			38089451	XM_135413.4	Mettl4		ILMN_2743985	001940717	S	1549	AATTTTTTGATTTGTTTCCATGCACCAGATATCCTGACCTGCACCTGACT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219198	ILMN_219198	FAM119A	NM_025964.3	NM_025964.3		67099	142372875	NM_025964.3	Fam119a	NP_080240.1	ILMN_2705570	001850138	S	2553	GCAGTTTAGAGCATAGCTATTATAACTGCACAGTGGCAGTGGGTGATAGA	1	-	64653117-64653166	1qC2	Mus musculus family with sequence similarity 119, member A (Fam119a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI464204	AI464204
Mus musculus	MEEBO	ILMN_185981	ILMN_185981	9627020_131	9627020_131						9627020_131		ILMN_2431623	003130333	S	13	GGGGCCCAACTCCATTTTCATCTAGGAGCACAGTTGTCAGGGTGTTTGTG										
Mus musculus	RefSeq	ILMN_210055	ILMN_210055	MYC	NM_010849.4	NM_010849.4		17869	100913213	NM_010849.4	Myc	NP_034979.3	ILMN_2623526	005290397	S	1210	TCTTTCCCTACCCGCTCAACGACAGCAGCTCGCCCAAATCCTGTACCTCG	15	+	61819660-61819709	15qD1	Mus musculus myelocytomatosis oncogene (Myc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The process of apoptosis in B cells [goid 1783] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active [goid 43279] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IDA]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IMP]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IDA]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [evidence IDA]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [evidence IMP]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IDA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AU016757; Myc2; Nird; c-myc; Niard	AU016757; Myc2; Nird; c-myc; Niard
Mus musculus	RefSeq	ILMN_210055	ILMN_210055	MYC	NM_010849.4	NM_010849.4		17869	100913213	NM_010849.4	Myc	NP_034979.3	ILMN_1231123	000110075	S	2225	TTTTCCCATGTAAATAGGGCCTTGAAATGTAAATAACTTTAATAAAACGT	15	+	61821742-61821791	15qD1	Mus musculus myelocytomatosis oncogene (Myc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The process of apoptosis in B cells [goid 1783] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active [goid 43279] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IDA]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IMP]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IDA]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [evidence IDA]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [evidence IMP]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IDA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AU016757; Myc2; Nird; c-myc; Niard	AU016757; Myc2; Nird; c-myc; Niard
Mus musculus	RefSeq	ILMN_211747	ILMN_211747	TMEM50B	NM_030018.3	NM_030018.3		77975	141802853	NM_030018.3	Tmem50b	NP_084294.1	ILMN_1244515	000160717	S	1867	GCAATAAATACTCCCTCTCACACTCGCTGCACAGTTAGGTGTGCTGGGGG	16	-	91575058-91575107	16qC3.3	Mus musculus transmembrane protein 50B (Tmem50b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			B230114J08Rik; AU015466; AU019872	B230114J08Rik; AU015466; AU019872
Mus musculus	RefSeq	ILMN_211747	ILMN_211747	TMEM50B	NM_030018.3	NM_030018.3		77975	141802853	NM_030018.3	Tmem50b	NP_084294.1	ILMN_2619110	004560372	S	805	CGTATACATGACGCTGAAGTCAGGTTTTTACTCCCAAGACTAAGATTGGT	16	-	91576120-91576169	16qC3.3	Mus musculus transmembrane protein 50B (Tmem50b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			B230114J08Rik; AU015466; AU019872	B230114J08Rik; AU015466; AU019872
Mus musculus	RefSeq	ILMN_224135	ILMN_230526	SHISA4	NM_175259.4	NM_175259.4		77552	118129842	NM_175259.4	Shisa4	NP_780468.1	ILMN_2775402	006350554	S	1054	CTCCTATATGCCCAGTTTGGGCTGAGGTGGAGACAAGTGAGGGGGCTCTA	1	-	137268119-137268168	1qE4	Mus musculus shisa homolog 4 (Xenopus laevis) (Shisa4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mShisa4; 9330132O05Rik	mShisa4; 9330132O05Rik
Mus musculus	RefSeq	ILMN_194772	ILMN_185532	MZF1	NM_145819.1	NM_145819.1		109889	41281742	NM_145819.1	Mzf1	NP_665818.1	ILMN_1229661	001500673	S	2462	TCACAAGGTTGTTGTGAGGCAGGCATCTCCCAACAGGCCCCAGTAAAGCC	7	-	13628538-13628587	7qA1	Mus musculus myeloid zinc finger 1 (Mzf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Mzf-2; Zfp121; Mzf2; Znf42; Zfp98	Mzf-2; Zfp121; Mzf2; Znf42; Zfp98
Mus musculus	RefSeq	ILMN_185532	ILMN_185532	MZF1	NM_145819.1	NM_145819.1		109889	41281742	NM_145819.1	Mzf1	NP_665818.1	ILMN_2478960	006040563	S	16	AGGGACTTGTTTGTTCCACCGCAAAAGGCTGTCCACAGGGACTCTTATTG	7	-	13639949-13639998	7qA1	Mus musculus myeloid zinc finger 1 (Mzf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Mzf-2; Zfp121; Mzf2; Znf42; Zfp98	Mzf-2; Zfp121; Mzf2; Znf42; Zfp98
Mus musculus	RefSeq	ILMN_185532	ILMN_185532	MZF1	NM_145819.1	NM_145819.1		109889	41281742	NM_145819.1	Mzf1	NP_665818.1	ILMN_2896739	003120053	S	2310	CACGCTCACGCAGCACCTGCGCACTCACCGGCACGAAAAGCCCTTCGCCT	7	-	13628690-13628739	7qA1	Mus musculus myeloid zinc finger 1 (Mzf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Mzf-2; Zfp121; Mzf2; Znf42; Zfp98	Mzf-2; Zfp121; Mzf2; Znf42; Zfp98
Mus musculus	RefSeq	ILMN_209559	ILMN_209559	TMEM39A	NM_026407.2	NM_026407.2		67846	27754068	NM_026407.2	Tmem39a	NP_080683.2	ILMN_2596970	001980379	S	1732	GCTCCTCCGGGACAGAATAGTCTTAGGCAGGGCATACTCCTACCCCCTCA	16	+	38591183-38591232	16qB4	Mus musculus transmembrane protein 39a (Tmem39a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610033C09Rik	2610033C09Rik
Mus musculus	Riken	ILMN_205759	ILMN_205759	A630086P05RIK	ri|A630086P05|PX00147I12|AK042386|3785					AK042386	A630086P05Rik		ILMN_1236292	007650671	S	3691	CCATGGAGCCAGGCATGGTGGCACACCCCGGAATATCAGTGTTTGGTAAA										
Mus musculus	Riken	ILMN_205769	ILMN_205769	C920027J16RIK	ri|C920027J16|PX00178P08|AK050643|1784					AK050643	C920027J16Rik		ILMN_2575087	000510309	S	1617	GAAGGACTGGCTGGGCAGCTGGAAAAGTTGCTAGTGGAAATGGAAGGGCC										
Mus musculus	RefSeq	ILMN_193347	ILMN_237160	GOT2	NM_010325.2	NM_010325.2		14719	133892509	NM_010325.2	Got2	NP_034455.1	ILMN_2593496	003870113	S	2278	CCATCTGCTCTAATCATGTAGACGTACTGCCGCCTGGTTTCTCTGTTACA	8	-	98388054-98388103	8qD1	Mus musculus glutamate oxaloacetate transaminase 2, mitochondrial (Got2), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid [goid 6532] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including 2-oxoglutarate [goid 19551] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including aspartate [goid 19550] [evidence IDA]; The chemical reactions and pathways involving oxaloacetate, the anion of oxobutanedioic acid, an important intermediate in metabolism, especially as a component of the TCA cycle [goid 6107] [evidence IDA]	Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate [goid 4069] [evidence IDA]; Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate [goid 4069] [evidence IDA]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]	MGC102129; FABP-pm; MGC115763; AL022787; Got-2; mAspAT	MGC102129; FABP-pm; MGC115763; AL022787; Got-2; mAspAT
Mus musculus	Riken	ILMN_207186	ILMN_207186	8030412L05RIK	ri|8030412L05|PX00650H08|AK078748|2931					AK078748	8030412L05Rik		ILMN_1235549	006620671	S	2459	GGTCACAAAAAGTGTACCAAAAGTCCACCTCTGAAATGCAGGTGGCAGGC										
Mus musculus	RefSeq	ILMN_232309	ILMN_232309	CAPN11	NM_001013767.2	NM_001013767.2		268958	118131210	NM_001013767.2	Capn11	NP_001013789.1	ILMN_3003124	001740209	S	2013	GAGTGACCGAGGTAGTCGTTGCCAGGTACTCGGATAACATGATTGTGGAC	17	-	45768782-45768831	17qB3	Mus musculus calpain 11 (Capn11), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]			protease	protease
Mus musculus	Riken	ILMN_204436	ILMN_204436	A730020L20RIK	ri|A730020L20|PX00149C06|AK042744|1788					AK042744	A730020L20Rik		ILMN_1237620	004060092	S	1635	CCCCTTCCATTTCCCTCTGTGTGTATAGAGAAGATGTGGCATCTGGATAT										
Mus musculus	RefSeq	ILMN_191275	ILMN_327707	TNS3	NM_001083587.1	NM_001083587.1		319939	134152675	NM_001083587.1	Tns3	NP_001077056.1	ILMN_1247133	001470491	S	7090	CTGCGAAAGGAGTATTGCCCAGGCTTTTGCTACAAGGCCATCGGTTGGGC	11	-	8331998-8332047	11qA1	Mus musculus tensin 3 (Tns3), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TEM6; F830010I22Rik; RP23-145C12.2; Tens1; BC023928	TEM6; F830010I22Rik; RP23-145C12.2; Tens1; BC023928
Mus musculus	RefSeq	ILMN_194082	ILMN_240567	ZNRF2	NM_199143.1	NM_199143.1		387524	40255286	NM_199143.1	Znrf2	NP_954594.1	ILMN_1236892	004220674	S	1739	GTGCTTTGCATTTCCAGGAGGTTTCCCTATGTTTGGGTAAAATGTTTAGC	6	+	54839347-54839396	6qB3	Mus musculus zinc and ring finger 2 (Znrf2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC129275; 1190002C14Rik; AU044205; MGC129274; D6Ertd365e	MGC129275; 1190002C14Rik; AU044205; MGC129274; D6Ertd365e
Mus musculus	RefSeq	ILMN_200922	ILMN_200922	LOC386567	XM_359408.1	XM_359408.1			38087089	XM_359408.1	LOC386567		ILMN_2540476	006660360	S	581	ATGCGAACTGCTGCGACCCTTCCTGGGGGCGGTGGGAGAACCGGATGGAA										
Mus musculus	Riken	ILMN_207378	ILMN_207378	KIF18A	ri|C430017A15|PX00667N02|AK082913|1936					AK082913	KIF18A		ILMN_1243905	003440075	S	1266	GAGTTGATTAGGCTGGTGCTTGGACTTTCTAGCCTCTTGTCTTAGCCTCC										
Mus musculus	RefSeq	ILMN_222889	ILMN_222889	OLFR666	NM_147096.1	NM_147096.1		259100	22128776	NM_147096.1	Olfr666	NP_667307.1	ILMN_1231239	007570259	S	613	GCTCTATTGATTGGTGTGTTTGACATTTGTTGTATCTCTGTGTCTTACAC	7	-	112041478-112041527	7qE3	Mus musculus olfactory receptor 666 (Olfr666), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR34-1	MOR34-1
Mus musculus	RefSeq	ILMN_213158	ILMN_225960	IL1A	NM_010554.4	NM_010554.4		16175	118130060	NM_010554.4	Il1a	NP_034684.2	ILMN_1243066	002630091	S	1243	CTCACTGTGCACCTTCGGCTTCAAAATGCCAGTTGAGTAGGATAAAGGTA	2	-	129126027-129126076	2qF1	Mus musculus interleukin 1 alpha (Il1a), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]	Il-1a	Il-1a
Mus musculus	RefSeq	ILMN_209263	ILMN_209263	ZFP418	NM_146179.2	NM_146179.2		232854	124339856	NM_146179.2	Zfp418	NP_666291.2	ILMN_1251225	006270195	S	2443	CCCCTTCCCTAATGGAAGCTTCAACTTCCTGTGCCTTGCAAATGACCTTC	7	+	7136014-7136063	7qA1	Mus musculus zinc finger protein 418 (Zfp418), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC31575; A230102I05Rik	MGC31575; A230102I05Rik
Mus musculus	RefSeq	ILMN_223819	ILMN_251620	BOK	NM_016778.2	NM_016778.2		51800	118131154	NM_016778.2	Bok	NP_058058.1	ILMN_1237404	001710070	S	82	TCTAGACCGCCGGAGACGGCAGCGAGCGGGTCCTGAAACCAGAACTCCAC	1	+	95582352-95582401	1qD	Mus musculus BCL2-related ovarian killer protein (Bok), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]		AI847676; mtd; AU021146; matador	AI847676; mtd; AU021146; matador
Mus musculus	RefSeq	ILMN_247560	ILMN_247560	2310047C04RIK	NM_027341.1	NM_027341.1		224170	124249053	NM_027341.1	2310047C04Rik	NP_081617.1	ILMN_2942314	002570129	S	3180	TTCCCTGGCCACCCCAACGGGCAGTTACCCAAGATCTGATACAAGGCAGG	16	-	48926093-48926104:48926105-48926142	16qB5	Mus musculus RIKEN cDNA 2310047C04 gene (2310047C04Rik), mRNA.				6430549P11Rik; A230104G20	6430549P11Rik; A230104G20
Mus musculus	RefSeq	ILMN_201409	ILMN_201409	LOC385116	XM_358065.1	XM_358065.1			38093565	XM_358065.1	LOC385116		ILMN_2542190	002570093	S	1404	CTGTAATGCAGAAAAATCTGAACAGCCCACCTTGGTTACAGCTAGCAAAG										
Mus musculus	MEEBO	ILMN_189688	ILMN_189688	2610036E23RIK	scl069919.1_123						2610036E23Rik		ILMN_1214287	002120278	S	1	CAGCTGCAGTCCTGCACTGAAAATATGATAGGAATGTAATGGAAATGTCC										
Mus musculus	Riken	ILMN_205366	ILMN_205366	SAS	ri|D130007J21|PX00182H09|AK051157|2603					AK051157	Sas		ILMN_2572010	005390176	S	2553	AAGGAGCTGCTTCTCTTCCGTCATGGTAGGAGAGGGGGTAAAAAGCGAAC										
Mus musculus	MEEBO	ILMN_195121	ILMN_195121	3110082D06RIK	scl073235.2_160				51770277	XM_140020	3110082D06Rik		ILMN_2512770	006590241	S	18	GGTATGCTCTTCCTGCATGCTTCAGCCACTTAAAAGAGGCGGCACTTCAT										
Mus musculus	MEEBO	ILMN_211041	ILMN_211041	MAN1C1	scl23683.9.1_4				46402228	NM_207237	Man1c1		ILMN_2611865	002940095	S	2456	GGTCCCTGGCGCCTACACGTTCCTTTCTATGGGGGAATTTCTGTGTCCCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	The chemical reactions and pathways resulting in the formation of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 30166] [evidence ISO]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence ISO]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISO]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence ISO]		
Mus musculus	RefSeq	ILMN_201561	ILMN_201561	OLFR812	NM_146795.1	NM_146795.1		258791	22129258	NM_146795.1	Olfr812	NP_667006.1	ILMN_2985491	002260168	S	686	CTCAGCAACGGAGAAAGGCCTTTTCCACCTGCTCCTCACACATGGTTGTT	10	-	129279361-129279410	10qD3	Mus musculus olfactory receptor 812 (Olfr812), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR110-1	MOR110-1
Mus musculus	RefSeq	ILMN_201561	ILMN_201561	OLFR812	NM_146795.1	NM_146795.1		258791	22129258	NM_146795.1	Olfr812	NP_667006.1	ILMN_1232617	004590368	S	9	CCAGTCAGGAGAGTTAGAGTTCATTTTACTTGGACTGACAGATGACCCTC	10	-	129280038-129280087	10qD3	Mus musculus olfactory receptor 812 (Olfr812), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR110-1	MOR110-1
Mus musculus	RefSeq	ILMN_201561	ILMN_201561	OLFR812	NM_146795.1	NM_146795.1		258791	22129258	NM_146795.1	Olfr812	NP_667006.1	ILMN_2680939	004070576	S	864	CACCCTAAGGAACCAGCAGGTGAAGGATGCTTTCAAACATATGCTTCATA	10	-	129279183-129279232	10qD3	Mus musculus olfactory receptor 812 (Olfr812), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR110-1	MOR110-1
Mus musculus	MEEBO	ILMN_189821	ILMN_189821	E230022H04RIK	scl51569.1_406				40254194	NM_153515	E230022H04Rik		ILMN_2471979	004880390	S	2	CTTCTGAGTACACGTCATCAAGAGTCCTGAATGAAGTATTGTAGAGAATA										
Mus musculus	MEEBO	ILMN_189821	ILMN_189821	E230022H04RIK	scl51569.1_406				40254194	NM_153515	E230022H04Rik		ILMN_2464666	001820327	S	10	GGCTTGAAGTGCTTGCTTCTGTTAAGTGTCTGACTTTCCCTGATGCCTGA										
Mus musculus	MEEBO	ILMN_190056	ILMN_190056	1110015C02RIK	scl074774.4_150						1110015C02Rik		ILMN_1220940	002100632	S	13	GAGCCAAACTAGAAGAACAAGGTGAAAATAGAAACCTTAGTAACTTGTGG										
Mus musculus	RefSeq	ILMN_217699	ILMN_217699	PHEX	NM_011077.2	NM_011077.2		18675	116686145	NM_011077.2	Phex	NP_035207.1	ILMN_1243830	002340411	S	5867	TTGCTTGTCCAAGATCTCAGGGCATGGAAGGACAGGTTTTGTGCTTCGGG	X	-	153596966-153597015	XqF4	Mus musculus phosphate regulating gene with homologies to endopeptidases on the X chromosome (hypophosphatemia, vitamin D resistant rickets) (Phex), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	HPDR; Gy; Hyp; HPDR1; PEX	HPDR; Gy; Hyp; HPDR1; PEX
Mus musculus	RefSeq	ILMN_201347	ILMN_201347	LOC382502	XM_356537.1	XM_356537.1			38091583	XM_356537.1	LOC382502		ILMN_1223649	000830364	S	270	GAACCCTGAAAACCCAGAAGCTTCTCAGGTGGACCCCCGAGTTTGGGATG										
Mus musculus	MEEBO	ILMN_224004	ILMN_224004	2310022A10RIK	scl32892.12_87				31541873	NM_175107	2310022A10Rik		ILMN_1227904	007570612	S	2516	CTGCTTGCCTTCTTTTGTTTTTTGAAACCCAAGGTGGCTCAAACTTGCTG										
Mus musculus	RefSeq	ILMN_215798	ILMN_215798	OLFR1484	NM_146291.1	NM_146291.1		258288	22129706	NM_146291.1	Olfr1484	NP_666403.1	ILMN_2663722	004230181	S	593	TCTTCATGTTGGCAGGATTCAATGTTGTTTTTTCCCTATTGGTTATATTG	19	+	13660388-13660437	19qA	Mus musculus olfactory receptor 1484 (Olfr1484), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR202-37	MOR202-37
Mus musculus	RefSeq	ILMN_256698	ILMN_256698	GNAI2	NM_008138.3	NM_008138.3		14678	110625715	NM_008138.3	Gnai2	NP_032164.2	ILMN_2908855	004220753	S	1838	CACCCCTTTCCAGCGATTCCGTGCCTTGAGTGTGTCTGCGTGTTTACACC				9qF1	Mus musculus guanine nucleotide binding protein, alpha inhibiting 2 (Gnai2), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IPI]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to one of its physiological ligands; muscarinic acetylcholine receptors activate inhibitory G proteins and can be activated by the fungal alkaloid muscarine [goid 7213] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence ISA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IGI]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	Gnai-2; Gia; C76432; Galphai2	Gnai-2; Gia; C76432; Galphai2
Mus musculus	RefSeq	ILMN_222587	ILMN_222587	FIG4	NM_133999.1	NM_133999.1		103199	19527219	NM_133999.1	Fig4	NP_598760.1	ILMN_1256668	007610349	S	3191	GTATCTGAAACTTTTCACCTCTTTGTACCATGCAAATGACTAATTGCAGG	10	-	40908000-40908049	10qB1	Mus musculus FIG4 homolog (S. cerevisiae) (Fig4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The chemical reactions and pathways involving phosphoinositides, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of inositol. They are important constituents of cell membranes [goid 30384] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vacuole [goid 7033] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A530089I17Rik; AI326867; Sac3	A530089I17Rik; AI326867; Sac3
Mus musculus	Riken	ILMN_204028	ILMN_204028	A630092F18RIK	ri|A630092F18|PX00148M16|AK042445|2235					AK042445	A630092F18Rik		ILMN_1215633	003840646	S	1958	GCCCCTGGCTACTACTTTGTTGCATCTGGACAGCTCTTAGCTCTACTTGG										
Mus musculus	Riken	ILMN_203293	ILMN_203293	C330016F22RIK	ri|C330016F22|PX00076J21|AK049243|2055					AK049243	C330016F22Rik		ILMN_2556191	001500072	S	1793	GCCGACATGTATGGAAATGCACTACATATGTCCCTCGTGCTCACAGAGGC										
Mus musculus	Riken	ILMN_206864	ILMN_206864	D930030K21RIK	ri|D930030K21|PX00202B19|AK086464|1534					AK086464	D930030K21Rik		ILMN_1230508	004590356	S	1336	CACTCCTGCCACAAGATCAGAACTGCCCGAACCTATTGAAACCTCCCTGC										
Mus musculus	RefSeq	ILMN_211512	ILMN_211512	SLC2A3	NM_011401.3	NM_011401.3		20527	142377808	NM_011401.3	Slc2a3	NP_035531.2	ILMN_2616565	000460327	S	3543	ACTCAGATTGCTATGGAAAGGGGCTTTGCTGGGAAAGGCGACTCCTCTAA	6	-	122677967-122678016	6qF2	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 3 (Slc2a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IMP]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	C78366; AA408729; Glut3; Glut-3; AL024341; AL023014; AU040424	C78366; AA408729; Glut3; Glut-3; AL024341; AL023014; AU040424
Mus musculus	RefSeq	ILMN_184760	ILMN_232894	SF3A1	NM_026175.4	NM_026175.4		67465	142352973	NM_026175.4	Sf3a1	NP_080451.3	ILMN_2630730	001980528	S	2679	CCCAGGGTTGTCCCACAGGACAGTTTCACACTATCGAGTGATGCTTAGTT	11	+	4080321-4080370	11qA1	Mus musculus splicing factor 3a, subunit 1 (Sf3a1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	5930416L09Rik; 1200014H24Rik; AI159724	5930416L09Rik; 1200014H24Rik; AI159724
Mus musculus	Riken	ILMN_201835	ILMN_201835	APS-PENDING	ri|5730427K19|PX00003O18|AK017604|1811					AK017604	Aps-pending		ILMN_1258314	005340563	S	1508	GCTTTCTAAGCCAGAACGGGCACCTCGCCTTTCCCACTGTGCCTGGTTTT										
Mus musculus	RefSeq	ILMN_209902	ILMN_257099	TCF25	NM_001037877.2	NM_001037877.2		66855	118131030	NM_001037877.2	Tcf25	NP_001032966.1	ILMN_2769733	001770519	S	2441	CCCTTTCCCAAGAGGCGCCTGCCTATGTGTTCTGTGCAGAATTGTTGGTC	8	+	125927577-125927626	8qE1	Mus musculus transcription factor 25 (basic helix-loop-helix) (Tcf25), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nulp1; 1100001J13Rik; D8Ertd325e; 1810041K11Rik; mKIAA1049	Nulp1; 1100001J13Rik; D8Ertd325e; 1810041K11Rik; mKIAA1049
Mus musculus	RefSeq	ILMN_258145	ILMN_258145	BC024868	NM_199149.1	NM_199149.1		232947	40255284	NM_199149.1	BC024868	NP_954600.1	ILMN_2844153	002510184	S	2637	CACTAGGGGCACAGGGCTGGGAGTGGCTTCCTGGACTTGAGAGCATATTT	7	-	18689773-18689822	7qA3	Mus musculus cDNA sequence BC024868 (BC024868), mRNA.				Gm158	Gm158
Mus musculus	RefSeq	ILMN_217195	ILMN_217195	ANXA5	NM_009673.1	NM_009673.1		11747	6753059	NM_009673.1	Anxa5	NP_033803.1	ILMN_2680142	002480059	S	1223	CCAAAGGTGTCTTAGATGAAAGCAGTGTCCCGCCCTTCTGATGTTCTGTC	3	-	36348107-36348156	3qB	Mus musculus annexin A5 (Anxa5), mRNA.		The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of coagulation [goid 50819] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IDA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [evidence IDA]	Anx5; R74653	Anx5; R74653
Mus musculus	Riken	ILMN_205004	ILMN_205004	9630009N10RIK	ri|9630009N10|PX00114N07|AK035842|3620					AK035842	9630009N10Rik		ILMN_1218422	000770181	S	3486	CCCAGTGGCTTACATCTGCTGTTCCATCACTCAGAAGGCTGAGGCAAGAG										
Mus musculus	RefSeq	ILMN_222725	ILMN_222725	B230380D07RIK	NM_172772.2	NM_172772.2		235461	118403315	NM_172772.2	B230380D07Rik	NP_766360.2	ILMN_1214163	001440379	S	1730	GGCCTCTCAGTACTACCAGGAGCAGGAGCAGGCTCAGGCTGTTGTGACTA	9	-	70455290-70455339	9qD	Mus musculus RIKEN cDNA B230380D07 gene (B230380D07Rik), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]		Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]	KIAA1164; mKIAA1164	KIAA1164; mKIAA1164
Mus musculus	RefSeq	ILMN_209769	ILMN_209769	A730036I17RIK	NM_177847.3	NM_177847.3		329513	142367589	NM_177847.3	A730036I17Rik	NP_808515.1	ILMN_1255080	004230070	S	2942	GCTCTCCAGTGAAAGCTGAAAGAGCTCTGTCAAAATTAGGCCTGGAATAG	2	+	129060851-129060900	2qF1	Mus musculus RIKEN cDNA A730036I17 gene (A730036I17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212738	ILMN_212738	TMTC1	NM_198967.3	NM_198967.3		387314	146198540	NM_198967.3	Tmtc1	NP_945318.1	ILMN_2629737	001770392	S	982	TTCCCACACAAAGACTCCTGGGGAGGCTGCCATTCACCATTGCCACCAGA				6qG3	Mus musculus transmembrane and tetratricopeptide repeat containing 1 (Tmtc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BC023818; Arg99	BC023818; Arg99
Mus musculus	RefSeq	ILMN_212738	ILMN_212738	TMTC1	NM_198967.3	NM_198967.3		387314	146198540	NM_198967.3	Tmtc1	NP_945318.1	ILMN_2659985	006960440	S	3809	CTCATAGACTCTTAAGTTGAGGGAAAAGAGCTCTGTCATTGACTTTTGAG				6qG3	Mus musculus transmembrane and tetratricopeptide repeat containing 1 (Tmtc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BC023818; Arg99	BC023818; Arg99
Mus musculus	RefSeq	ILMN_212738	ILMN_212738	TMTC1	NM_198967.3	NM_198967.3		387314	146198540	NM_198967.3	Tmtc1	NP_945318.1	ILMN_2721218	004220224	S	1203	GGAGGAACTATGCCCCTCTTCTCAGAGCAAGACAATCCAGCTTCATTCTC				6qG3	Mus musculus transmembrane and tetratricopeptide repeat containing 1 (Tmtc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BC023818; Arg99	BC023818; Arg99
Mus musculus	RefSeq	ILMN_213229	ILMN_213229	KCNE2	NM_134110.1	NM_134110.1		246133	19882204	NM_134110.1	Kcne2	NP_598871.1	ILMN_2794237	007000215	S	1439	CTCAGGGGACTGAGGTGGGACAGGCTAGCTGAGGTTCCAAGCCATTCTAG	16	+	92186737-92186786	16qC4	Mus musculus potassium voltage-gated channel, Isk-related subfamily, gene 2 (Kcne2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	AW048273; 2200002I16Rik; MiRP1	AW048273; 2200002I16Rik; MiRP1
Mus musculus	RefSeq	ILMN_200333	ILMN_200333	LOC386253	XM_359140.1	XM_359140.1			38081336	XM_359140.1	LOC386253		ILMN_1219681	006450196	S	113	TGGATAAGGAACGCATAAGCCGCCTGCGCTGTGGGTGCGACGCCAGTCAT										
Mus musculus	RefSeq	ILMN_199310	ILMN_199310	LOC236170	XM_135533.2	XM_135533.2			23609403	XM_135533.2	LOC236170		ILMN_2534794	002680673	S	274	TTCCACCTTCGGAAAGCCTCTGTGCACTGGAGCGACTCGGCTGTGGTACT										
Mus musculus	MEEBO	ILMN_193414	ILMN_193414	6330525I24RIK	scl15287.1.1_66						6330525I24Rik		ILMN_2496962	002690477	S	2	ATGCCCATGGCTTCTCATCACCACACAGCCTAACTTTGTTCAGGTGAGGC										
Mus musculus	Riken	ILMN_205787	ILMN_205787	MSH2	ri|D230024H20|PX00188O22|AK051960|2503					AK051960	Msh2		ILMN_1220816	007150167	S	2145	GGTCTTCTTCTAGAGCAGCTCTTAGCCACTGAGCCGTCTCTCTAGCCCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A heterodimer involved in binding to and correcting insertion/deletion mutations. In human the complex consists of two subunits, MSH2 and MSH3 [goid 32302] [evidence IEA]; A heterodimer involved in the recognition and repair of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MSH2 and MSH6 [goid 32301] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IDA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence ISO]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells [goid 19724] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Pathways for DNA repair which occur after DNA has replicated, e.g. mismatch repair, and which involve translesion synthesis (TLS-type) DNA polymerases [goid 6301] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA recombination [goid 45910] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; The slowing of DNA synthesis in response to DNA damage by the prevention of new origin firing and the stabilization of slow replication fork progession [goid 31573] [evidence IGI]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IDA]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IGI]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, also known as immunoglobulin gene segments, within a single locus following the induction of an immune response [goid 2204] [evidence IGI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IMP]; Interacting selectively with damaged DNA [goid 3684] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IMP]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IMP]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IMP]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence IDA]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence ISO]		
Mus musculus	RefSeq	ILMN_216356	ILMN_240965	4930563P21RIK	NM_029232.1	NM_029232.1		75275	58037404	NM_029232.1	4930563P21Rik	NP_083508.1	ILMN_1255963	001940102	S	892	GTCATCCGGTTACTGGGTTACGTGTTCTTCCACCTGCAATATGTAAACCC	2	+	113137002-113137051	2qE4	Mus musculus RIKEN cDNA 4930563P21 gene (4930563P21Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-288M21.1	RP23-288M21.1
Mus musculus	RefSeq	ILMN_219778	ILMN_325835	LOC100042199	XM_001478983.1	XM_001478983.1		100042199	149254569	XM_001478983.1	LOC100042199	XP_001479033.1	ILMN_2713487	002940242	S	117	CTTTCCAGCCAAGCACCTGTTGGGGATACTGCCCACTCCTAATCTTTCCC	5	+	116081170-116081219	5qF	PREDICTED: Mus musculus hypothetical protein LOC100042199 (LOC100042199), mRNA.					
Mus musculus	RefSeq	ILMN_223225	ILMN_223225	SLC19A2	NM_054087.2	NM_054087.2		116914	118131106	NM_054087.2	Slc19a2	NP_473428.1	ILMN_1250531	003310270	S	3417	GCAGAATGCAGACCCTAGTGGGCTGTACTGTATGCACTTTGATGAAGACG	1	+	166195371-166195420	1qH2.2	Mus musculus solute carrier family 19 (thiamine transporter), member 2 (Slc19a2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of thiamin into, out of, within or between cells. Thiamin is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 15888] [evidence IDA]	Catalysis of the transfer of thiamin from one side of the membrane to the other. Thiamin is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 15234] [evidence IDA]	TRMA; AW322295; THTR1; AV276020; DDA1	TRMA; AW322295; THTR1; AV276020; DDA1
Mus musculus	RefSeq	ILMN_257803	ILMN_257803	HNRPA1	NM_001039129.1	NM_001039129.1		15382	85060506	NM_001039129.1	Hnrpa1	NP_001034218.1	ILMN_3096701	002360164	A	366	TCTCAGCGACCAGGTGCCCACTTAACTGTGAAAAAGATCTTTGTTGGTGG	15	+	103069941-103069990	15qF3	Mus musculus heterogeneous nuclear ribonucleoprotein A1 (Hnrpa1), transcript variant 2, mRNA.				Hdp; D15Ertd119e; hnrnp-A1; MGC103392; MGC102127; MGC102128	Hdp; D15Ertd119e; hnrnp-A1; MGC103392; MGC102127; MGC102128
Mus musculus	RefSeq	ILMN_257803	ILMN_257803	HNRPA1	NM_001039129.1	NM_001039129.1		15382	85060506	NM_001039129.1	Hnrpa1	NP_001034218.1	ILMN_3024068	004810338	I	942	TATGACAGCTATAACAACGGAGGAGGCGGAGGCGGCTTTGGCGGTGGTAG	15	+	103071064-103071113	15qF3	Mus musculus heterogeneous nuclear ribonucleoprotein A1 (Hnrpa1), transcript variant 2, mRNA.				Hdp; D15Ertd119e; hnrnp-A1; MGC103392; MGC102127; MGC102128	Hdp; D15Ertd119e; hnrnp-A1; MGC103392; MGC102127; MGC102128
Mus musculus	RefSeq	ILMN_217862	ILMN_217862	SVS5	NM_009301.1	NM_009301.1		20944	6678188	NM_009301.1	Svs5	NP_033327.1	ILMN_1227330	004250598	S	470	CTGAGAGAAGCCGGTGATGTCTTCAGGATTCAAGTTTCCATGGGGCCTAG	2	+	164160001-164160050	2qH3	Mus musculus seminal vesicle secretory protein 5 (Svs5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			BB115186; Svp1; Svp-1; MGC130266; Svp5; Semg1	BB115186; Svp1; Svp-1; MGC130266; Svp5; Semg1
Mus musculus	RefSeq	ILMN_259043	ILMN_259043	CER1	NM_009887.1	NM_009887.1		12622	6753409	NM_009887.1	Cer1	NP_034017.1	ILMN_2884751	002850255	S	519	AGGGAGTCATCCTGCCCATCAAAAGCCACGAAGTACACTGGGAGACCTGC	4	-	82530487-82530536	4qC3	Mus musculus cerberus 1 homolog (Xenopus laevis) (Cer1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IDA]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IGI]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	Cerl; Cerr1; cer-1	Cerl; Cerr1; cer-1
Mus musculus	Riken	ILMN_205609	ILMN_205609	B930083E23RIK	ri|B930083E23|PX00166G18|AK047526|4126					AK047526	B930083E23Rik		ILMN_1218686	000450441	S	4049	CCAGCACTGTGGAAGACAGAGCCACAAGGACCAACCCAGGCTCCATACTG										
Mus musculus	RefSeq	ILMN_211237	ILMN_244875	LOC667386	XM_975403.1	XM_975403.1		667386	94375795	XM_975403.1	LOC667386	XP_980497.1	ILMN_2613888	005220291	S	457	GCAAGGTAGTATGACACTAAGACACTAAGAAGAGAGAAGTGAATTTCTTG				5qG3	PREDICTED: Mus musculus hypothetical LOC667386 (LOC667386), mRNA.					
Mus musculus	RefSeq	ILMN_214576	ILMN_214576	PRR15	NM_030024.2	NM_030024.2		78004	34328325	NM_030024.2	Prr15	NP_084300.1	ILMN_2649456	004850470	S	1268	CGGGGTGAGAAGATCCTCCCAGGTAGAGGCGTTGAGAAGTTACATTGCCT	6	+	54280081-54280130	6qB3	Mus musculus proline rich 15 (Prr15), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		G90; E130201N16Rik	G90; E130201N16Rik
Mus musculus	RefSeq	ILMN_210983	ILMN_210983	DGCR6	NM_010047.1	NM_010047.1		13353	29789013	NM_010047.1	Dgcr6	NP_034177.1	ILMN_2967294	000240239	S	870	AAGGCAGCTCTGTGACCAAGCGGGGGGTCCTTGCTGTCCTCCGTTGCCTA	16	+	17984513-17984524:17984525-17984562	16qA3	Mus musculus DiGeorge syndrome critical region gene 6 (Dgcr6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU044152	AU044152
Mus musculus	RefSeq	ILMN_221886	ILMN_240777	BIRC2	NM_007465.1	NM_007465.1		11797	6680697	NM_007465.1	Birc2	NP_031491.1	ILMN_2741621	006040647	S	1379	GGCTTCTATTACATAGGGCCTGGAGACAGGGTGGCCTGTTTTGCCTGTGG	9	-	7833827-7833876	9qA1	Mus musculus baculoviral IAP repeat-containing 2 (Birc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Api2; MIHC; MIAP2; IAP2; Birc3; MIHB; MIAP1; RNF48; HIAP2; HIAP1; Api1; AW146227; cIAP-2; IAP1; cIAP-1; cIAP1; mcIAP1; cIAP2	Api2; MIHC; MIAP2; IAP2; Birc3; MIHB; MIAP1; RNF48; HIAP2; HIAP1; Api1; AW146227; cIAP-2; IAP1; cIAP-1; cIAP1; mcIAP1; cIAP2
Mus musculus	RefSeq	ILMN_221886	ILMN_240777	BIRC2	NM_007465.1	NM_007465.1		11797	6680697	NM_007465.1	Birc2	NP_031491.1	ILMN_1226186	002900450	S	3075	GTGTGTGCAGGGATGTATGCAGGCAAAACACTGTGTATATAATAAATAAA	9	-	7818241-7818290	9qA1	Mus musculus baculoviral IAP repeat-containing 2 (Birc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Api2; MIHC; MIAP2; IAP2; Birc3; MIHB; MIAP1; RNF48; HIAP2; HIAP1; Api1; AW146227; cIAP-2; IAP1; cIAP-1; cIAP1; mcIAP1; cIAP2	Api2; MIHC; MIAP2; IAP2; Birc3; MIHB; MIAP1; RNF48; HIAP2; HIAP1; Api1; AW146227; cIAP-2; IAP1; cIAP-1; cIAP1; mcIAP1; cIAP2
Mus musculus	RefSeq	ILMN_240777	ILMN_240777	BIRC2	NM_007465.1	NM_007465.1		11797	6680697	NM_007465.1	Birc2	NP_031491.1	ILMN_2990616	004070184	S	2803	CAGGACTGTGTCTGTTCCAGAGCAGGAGTTGGGATGCTTGCTGTATGTCC	9	-	7818513-7818562	9qA1	Mus musculus baculoviral IAP repeat-containing 2 (Birc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Api2; MIHC; MIAP2; IAP2; Birc3; MIHB; MIAP1; RNF48; HIAP2; HIAP1; Api1; AW146227; cIAP-2; IAP1; cIAP-1; cIAP1; mcIAP1; cIAP2	Api2; MIHC; MIAP2; IAP2; Birc3; MIHB; MIAP1; RNF48; HIAP2; HIAP1; Api1; AW146227; cIAP-2; IAP1; cIAP-1; cIAP1; mcIAP1; cIAP2
Mus musculus	Riken	ILMN_205687	ILMN_205687	E130314O04RIK	ri|E130314O04|PX00208L10|AK053852|2456					AK053852	E130314O04Rik		ILMN_1213586	000020377	S	2230	CCTTAGCTGCTTTTTCCGTGGAGTCTGATGTATTCCTTGGGGGAAATGAG										
Mus musculus	RefSeq	ILMN_222469	ILMN_222469	HAX1	NM_011826.1	NM_011826.1		23897	6754159	NM_011826.1	Hax1	NP_035956.1	ILMN_2972392	007050121	S	462	GAGACTGCGGGAGGGGCAGACACTACGAGACTCAATGCTTAAGTACCCAG	3	-	90083415-90083464	3qF1	Mus musculus HCLS1 associated X-1 (Hax1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HAX-1; mHAX-1s; SIG-111; Hs1bp1; Silg111	HAX-1; mHAX-1s; SIG-111; Hs1bp1; Silg111
Mus musculus	RefSeq	ILMN_219815	ILMN_219815	DENND1A	NM_146122.2	NM_146122.2		227801	31542026	NM_146122.2	Dennd1a	NP_666234.2	ILMN_2713879	005700008	S	3661	GGTGGTCATCTCCAAACCTCTCTAGCAATATACTCTTTCCTGAGTCTTCA	2	-	37655114-37655163	2qB	Mus musculus DENN/MADD domain containing 1A (Dennd1a), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes [goid 30136] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a clathrin-coated vesicle [goid 30665] [evidence IDA]	Invagination of the axonal plasma membrane creating a membrane-bounded vesicle. Without this process the presynaptic terminal would swell up due to fusion of vesicle membranes during neurotransmitter release. The vesicles created may subsequently be used for neurotransmitter storage/release [goid 48488] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IPI]	MGC38995; connecdenn; 6030446I19Rik	MGC38995; connecdenn; 6030446I19Rik
Mus musculus	Riken	ILMN_206682	ILMN_206682	FBXL3A	ri|B230209E19|PX00316L12|AK080802|2961					AK080802	Fbxl3a		ILMN_1260089	000670630	S	2366	GGGCCACCCAAAGCCAGGATCCAATCTGAAGAAAATCCCTTGGAGTAGGA										
Mus musculus	RefSeq	ILMN_199802	ILMN_199802	LOC383027	XM_356807.1	XM_356807.1			38077509	XM_356807.1	LOC383027		ILMN_1229118	001110491	S	333	AGGCACAGCAATGCCAGAAACTACCTTACATCTCGCCAGTGCCAGCAGTC										
Mus musculus	RefSeq	ILMN_194636	ILMN_253738	LOC669458	XR_002524.1	XR_002524.1		669458	94381542	XR_002524.1	LOC669458		ILMN_2508190	002000044	S	2235	GGAGCAAAAGTGTGGGGTTCAGAGGGAAGTGGAATTTTATAATGAGGTGC					PREDICTED: Mus musculus similar to paired-Ig-like receptor A11 (LOC669458), mRNA.					
Mus musculus	MEEBO	ILMN_189660	ILMN_189660	LPP	scl49287.19_426				32129234	NM_178665	Lpp		ILMN_2463260	001260187	S	11	CTGCCTCATAAAGTCCTTTCCCTTTCGCACCGTCTTCTCAAGGATAACAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_220236	ILMN_220236	RAB6	scl00030.1_17				17512289	BC019118	Rab6		ILMN_2719507	000130564	S	483	CAGGAACGTTTCCGTAGCCTCATTCCCAGTTACATCCGTGACTCTGCTGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine [goid 18125] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221157	ILMN_221157	ZFP438	NM_178722.4	NM_178722.4		240186	141802290	NM_178722.4	Zfp438	NP_848837.2	ILMN_2731675	003190102	S	3037	TATATTTATTAACAGTTAATTCTACAGCTGTGGAATATAGTCCCAACTGT	18	-	5210146-5210195	18qA1	Mus musculus zinc finger protein 438 (Zfp438), mRNA.				B830013J05Rik; 9430031G09; 9430091M14Rik	B830013J05Rik; 9430031G09; 9430091M14Rik
Mus musculus	RefSeq	ILMN_209813	ILMN_315214	ABPB	NM_001100464.1	NM_001100464.1		233099	154689643	NM_001100464.1	Abpb	NP_001093934.1	ILMN_2771109	000050402	S	77	ATGAAGGGGACACTTCTTCTGCTGGCCTTGCTGGTGACTGGAGAGCTGGG				7qB1	Mus musculus androgen binding protein beta (Abpb), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_223987	ILMN_315214	ABPB	NM_001100464.1	NM_001100464.1		233099	154689643	NM_001100464.1	Abpb	NP_001093934.1	ILMN_1221912	003450592	S	346	CAAGGCATACTATCCCGAAGATTCTGTAAACAAAATGGCGGATATGTTTA				7qB1	Mus musculus androgen binding protein beta (Abpb), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_191802	ILMN_326115	LOC100047339	XM_001477940.1	XM_001477940.1		100047339	149266076	XM_001477940.1	LOC100047339	XP_001477990.1	ILMN_2727638	005340402	S	1172	TCCTGGGGGAATACTGATTACCACCTCTTTTCTAGCCAGATCCAGCTGAG					PREDICTED: Mus musculus similar to lysyl oxidase-like 2 (LOC100047339), mRNA.					
Mus musculus	Riken	ILMN_206469	ILMN_206469	D330050H21RIK	ri|D330050H21|PX00193C13|AK084833|3152					AK084833	D330050H21Rik		ILMN_1237431	000290288	S	2840	GTTATTTGGGAAAGGTGGTAGGGCTGAAGCCCCCTTGTTTCTGCCGGCAC										
Mus musculus	RefSeq	ILMN_199503	ILMN_199503	LOC383590	XM_357138.1	XM_357138.1			38073649	XM_357138.1	LOC383590		ILMN_1219771	000520187	S	283	GTGGCATCAACTCCGCATGAATGTGTGGGAGTGATTTTGTTTGGTGCTGC										
Mus musculus	MEEBO	ILMN_192517	ILMN_192517	5430417C01RIK	scl31952.1.1_218						5430417C01Rik		ILMN_2488806	006420187	S	2	GTGCGGCTCTCAGAGGACTTAGTGCTACATCCTGTCACGAGATTAGACAC										
Mus musculus	RefSeq	ILMN_211771	ILMN_211771	INPP5F	NM_178641.3	NM_178641.3		101490	31560834	NM_178641.3	Inpp5f	NP_848756.2	ILMN_2619389	003830554	S	2043	GAGTTATATGCAGTTGCTGCTGCCGGGTGACGAGAAGTTCCACGGGGGCT	7	+	128476359-128476408	7qF3	Mus musculus inositol polyphosphate-5-phosphatase F (Inpp5f), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SAC2; mKIAA0966; cI-27; AW561896; 5830435P03Rik; AI115354	SAC2; mKIAA0966; cI-27; AW561896; 5830435P03Rik; AI115354
Mus musculus	RefSeq	ILMN_211771	ILMN_211771	INPP5F	NM_178641.3	NM_178641.3		101490	31560834	NM_178641.3	Inpp5f	NP_848756.2	ILMN_2785512	005720239	S	4364	CTAACCACCAAGAACCTCTTCTGTAACCCAGAGTGAGAAAGCTGTAGGCA	7	+	128487208-128487257	7qF3	Mus musculus inositol polyphosphate-5-phosphatase F (Inpp5f), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SAC2; mKIAA0966; cI-27; AW561896; 5830435P03Rik; AI115354	SAC2; mKIAA0966; cI-27; AW561896; 5830435P03Rik; AI115354
Mus musculus	RefSeq	ILMN_220653	ILMN_239767	ITGB1BP3	NM_027120.2	NM_027120.2		69564	141803550	NM_027120.2	Itgb1bp3	NP_081396.1	ILMN_2724880	006290148	S	404	AGCCAACGCTACTTCCTGACCGTGCCGTATGAGGAATGCAAGCGGAGGAG	10	-	80662772-80662821	10qC1	Mus musculus integrin beta 1 binding protein 3 (Itgb1bp3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IPI]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + N-ribosylnicotinamide = ADP + nicotinamide ribonucleotide [goid 50262] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310015C21Rik; Mibp	2310015C21Rik; Mibp
Mus musculus	RefSeq	ILMN_192628	ILMN_239767	ITGB1BP3	NM_027120.2	NM_027120.2		69564	141803550	NM_027120.2	Itgb1bp3	NP_081396.1	ILMN_1244715	001260753	S	1645	GGGATTCTGTCATTGCAATTCCACAGATGGCCATTAGGTGTCACCCTCAG	10	-	80661060-80661109	10qC1	Mus musculus integrin beta 1 binding protein 3 (Itgb1bp3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IPI]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + N-ribosylnicotinamide = ADP + nicotinamide ribonucleotide [goid 50262] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310015C21Rik; Mibp	2310015C21Rik; Mibp
Mus musculus	RefSeq	ILMN_220653	ILMN_239767	ITGB1BP3	NM_027120.2	NM_027120.2		69564	141803550	NM_027120.2	Itgb1bp3	NP_081396.1	ILMN_2727022	005360594	S	586	CCCGGAGGGACTCTTCCATCAAGTTCTGGAGGATATTCAAAACAGACTGC	10	-	80662119-80662168	10qC1	Mus musculus integrin beta 1 binding protein 3 (Itgb1bp3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IPI]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + N-ribosylnicotinamide = ADP + nicotinamide ribonucleotide [goid 50262] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310015C21Rik; Mibp	2310015C21Rik; Mibp
Mus musculus	RefSeq	ILMN_261451	ILMN_261451	OMT2B	NM_205822.1	NM_205822.1		382088	46849793	NM_205822.1	Omt2b	NP_991391.1	ILMN_3105984	000380477	A	170	CTTTCCTGGACCCCCTGGAGTTTGTGATTGTGTACCTAGAGACCTGGGTC	9	+	78176006-78176055	9qE1	Mus musculus oocyte maturation, beta (Omt2b), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]			AU018149; OM2b; C86230; Mosg	AU018149; OM2b; C86230; Mosg
Mus musculus	Riken	ILMN_203800	ILMN_203800	CERD4-PENDING	ri|A230085B09|PX00130E05|AK039011|3136					AK039011	Cerd4-pending		ILMN_1215266	000780209	S	2961	TGCCTGTGTGGATTCAAAAGACCCAAGGGAGGGCTGGAGGAATGGCCCGT										
Mus musculus	RefSeq	ILMN_217320	ILMN_217320	PDCD6	NM_011051.2	NM_011051.2		18570	31981579	NM_011051.2	Pdcd6	NP_035181.1	ILMN_2681832	005130470	S	1371	GACACATTCTGGAACCAATTCTGTGAATTGAAGAAACGGGTCATGTAACG	13	-	74440596-74440645	13qC1	Mus musculus programmed cell death 6 (Pdcd6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	alg-2; MA-3; Alg2; AV299538; PS2	alg-2; MA-3; Alg2; AV299538; PS2
Mus musculus	RefSeq	ILMN_220029	ILMN_220029	CRIPT	NM_019936.1	NM_019936.1		56724	9910165	NM_019936.1	Cript	NP_064320.1	ILMN_2846373	004860035	S	1088	CATCCCTCTACCCCCGCTGCACTCCCTCAGAAATAAAGCAAGCACCCTGG	17	+	86944086-86944135	17qE4	Mus musculus cysteine-rich PDZ-binding protein (Cript), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA589469; 1200020A08Rik	AA589469; 1200020A08Rik
Mus musculus	RefSeq	ILMN_214907	ILMN_214907	NSUN4	NM_028142.3	NM_028142.3		72181	146149329	NM_028142.3	Nsun4	NP_082418.1	ILMN_1244070	003130468	S	2159	CACGCGGTGTTTTGGGGTGACATTACGTAAGGTGACTTGCGTGCTGATTG				4qD1	Mus musculus NOL1/NOP2/Sun domain family, member 4 (Nsun4), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	2310010O12Rik; AI507900; RP23-383D12.4; 2810405F18Rik	2310010O12Rik; AI507900; RP23-383D12.4; 2810405F18Rik
Mus musculus	RefSeq	ILMN_208874	ILMN_208874	OLFR554	NM_146325.2	NM_146325.2		258322	121247461	NM_146325.2	Olfr554	NP_666437.2	ILMN_2590359	004890047	S	617	GCTTTCTGGTGTTGATCCTGGATTCAGCGGCCATTGCTGCCTCCTATGTG	7	+	109789378-109789427	7qE3	Mus musculus olfactory receptor 554 (Olfr554), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR25-1	MOR25-1
Mus musculus	RefSeq	ILMN_216557	ILMN_216557	FBXO21	NM_145564.3	NM_145564.3		231670	142371789	NM_145564.3	Fbxo21	NP_663539.1	ILMN_1244991	000460747	S	3459	GCATGGTGGGAGTCTCCATTGCTGGGTTTCTGCTTCGATTTCCTTTTTCC	5	+	118459750-118459799	5qF	Mus musculus F-box protein 21 (Fbxo21), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		AU016673; 2810425J22Rik; MGC28066; mKIAA0875	AU016673; 2810425J22Rik; MGC28066; mKIAA0875
Mus musculus	MEEBO	ILMN_184826	ILMN_184826	ABCB9	scl26044.13_63				9845229	NM_019875	Abcb9		ILMN_2597249	001090008	S	3215	TATTCTCAGATTGGTGGAGGGGGACCAAGGCAATGCCCAGGGTCTGGCTT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15197] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184826	ILMN_184826	ABCB9	scl26044.13_63				9845229	NM_019875	Abcb9		ILMN_2597248	001110615	S	3214	GTATTCTCAGATTGGTGGAGGGGGACCAAGGCAATGCCCAGGGTCTGGCT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15197] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220669	ILMN_220669	PLK2	NM_152804.1	NM_152804.1		20620	22779888	NM_152804.1	Plk2	NP_690017.1	ILMN_1260448	002100278	S	2539	GGTTGCTCCCTTGCTGTTTAAAGGCTACAATCAGAGCAGCTTTTGGCTGC	13	+	111190807-111190856	13qD2.2	Mus musculus polo-like kinase 2 (Drosophila) (Plk2), mRNA.		Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Snk	Snk
Mus musculus	RefSeq	ILMN_197897	ILMN_197897	LOC243968	XM_145594.4	XM_145594.4			38079261	XM_145594.4	LOC243968		ILMN_1235252	006760112	S	2537	GACCTCATTTTCCACTCAAGAAGGGCAGTGGGCTCTGGCCCCGTGGAGAA										
Mus musculus	RefSeq	ILMN_198057	ILMN_198057	LOC269527	XM_194135.2	XM_194135.2			38081141	XM_194135.2	LOC269527		ILMN_1256915	004610037	S	856	ACACCAGACTTTTCACCAGAGACTATGAAAGCGAGAAGAGCCTGGAAGGG										
Mus musculus	RefSeq	ILMN_222031	ILMN_222031	TGM1	NM_019984.2	NM_019984.2		21816	31982704	NM_019984.2	Tgm1	NP_064368.2	ILMN_2743642	006270040	S	2541	CTCAGATGCTGGAGGTGACAGTCGCTCTGGGGAGAACATACCTATGGCAT	14	-	56319056-56319105	14qC3	Mus musculus transglutaminase 1, K polypeptide (Tgm1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IEA]	Tgase1; 2310004J08Rik	Tgase1; 2310004J08Rik
Mus musculus	Riken	ILMN_203640	ILMN_203640	GABRB2	ri|9330153H24|PX00105K01|AK034069|2711					AK034069	Gabrb2		ILMN_1229166	007200010	S	2536	CCCTTAGTAGCCCAGAGAATCATCAGACTATCGTTTTCCTTCCTTTATCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_185023	ILMN_324685	LOC100044160	XM_001471749.1	XM_001471749.1		100044160	149263010	XM_001471749.1	LOC100044160	XP_001471799.1	ILMN_1244658	002570661	S	4005	GCAGCTTTTTAGAAAACCAACAGACCTTGTTTGTTTCTCATGCATTCTAC					PREDICTED: Mus musculus hypothetical protein LOC100044160 (LOC100044160), mRNA.					
Mus musculus	RefSeq	ILMN_212474	ILMN_212474	PDE9A	NM_008804.3	NM_008804.3		18585	141802966	NM_008804.3	Pde9a	NP_032830.2	ILMN_2626863	004480280	S	1788	ATGTTTTCTAAGAACCATTTTGTTCACTGATATAAAAACAGGAATTCACG	17	+	31612995-31613044	17qB1	Mus musculus phosphodiesterase 9A (Pde9a), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	PDE9A1	PDE9A1
Mus musculus	RefSeq	ILMN_192677	ILMN_228230	HCFC2	XM_001002437.1	XM_001002437.1		67933	94388510	XM_001002437.1	Hcfc2	XP_001002437.1	ILMN_2507044	000990634	S	5029	CACAGGCTTGCAGACGAGCAAAAATCGCTTCTGCTTTAGAGTGTCTGCTC	10	+	82171932-82171981	10qC1	PREDICTED: Mus musculus host cell factor C2, transcript variant 1 (Hcfc2), mRNA.					
Mus musculus	RefSeq	ILMN_192677	ILMN_228230	HCFC2	XM_001002437.1	XM_001002437.1		67933	94388510	XM_001002437.1	Hcfc2	XP_001002437.1	ILMN_2490287	007550685	S	3337	GGACGACTGAGTAGCTGTGCCCTCCAACCTTCGTGTGATGTGCCCAGTGT	10	+	82170240-82170289	10qC1	PREDICTED: Mus musculus host cell factor C2, transcript variant 1 (Hcfc2), mRNA.					
Mus musculus	RefSeq	ILMN_223905	ILMN_329626	OLFR69	NM_001100160.1	NM_001100160.1		18370	154090968	NM_001100160.1	Olfr69	NP_001093630.1	ILMN_2771282	001690754	S	1253	CCCTAAATCTTATACAGATAAGAAAGTGTGTGGCAACATGTGAATTTCAC				7qE3	Mus musculus olfactory receptor 69 (Olfr69), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR22-2; 3'[b]3; 3'beta3	MOR22-2; 3'[b]3; 3'beta3
Mus musculus	RefSeq	ILMN_190874	ILMN_255696	NXN	NM_008750.4	NM_008750.4		18230	142385508	NM_008750.4	Nxn	NP_032776.1	ILMN_2474011	004830133	S	2511	ACCAGCCCAAACCATTTATTTTGGAAAACGCAGTTGTCCTCCCCCAACAA	11	-	76070878-76070927	11qB5	Mus musculus nucleoredoxin (Nxn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+ [goid 47134] [evidence IEA]; Catalysis of the reaction: thioredoxin + NADP+ = thioredoxin disulfide + NADPH + H+ [goid 4791] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221685	ILMN_221685	CML1	NM_023160.1	NM_023160.1		66116	12963542	NM_023160.1	Cml1	NP_075649.1	ILMN_2739027	007380671	S	801	GGCAGGCCAGTACTTCATGAGTATATTCTGGAGGTTAGCAGGTATTTGTA	6	-	85860292-85860341	6qC3	Mus musculus camello-like 1 (Cml1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence ISA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence NAS]	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence NAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AI266962; 1110002I11Rik	AI266962; 1110002I11Rik
Mus musculus	Riken	ILMN_202924	ILMN_202924	4732485D01RIK	ri|4732485D01|PX00052E07|AK029049|2924					AK029049	4732485D01Rik		ILMN_1223721	003390446	S	2602	TGAGAGATGGCAGAGTGAGGAGGCGAGCGAGCGAGCGAGCAGGCACTGCA										
Mus musculus	Riken	ILMN_203316	ILMN_203316	CRYBB3	ri|E130107C24|PX00091J21|AK053552|1420					AK053552	Crybb3		ILMN_1251317	006550201	S	1020	AGCGTCTGGGAGGCTAGGCAAGAGGAGTGTGAGTTTGAAAGAGGCCCCGG								The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221345	ILMN_221345	ART2B	NM_019915.2	NM_019915.2		11872	110815850	NM_019915.2	Art2b	NP_064299.2	ILMN_1215074	002940367	S	789	ATCCAGAGAGAGCTGTGTATCCCTGTTCCTTGTGGTTCTCCTCGGTCTTC	7	-	108727405-108727454	7qE3	Mus musculus ADP-ribosyltransferase 2b (Art2b), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]	The transfer, from NAD, of ADP-ribose to peptidyl-arginine to form omega-N-(ADP-ribosyl)-L-arginine [goid 18120] [evidence IDA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Rt-6; Rt6-2; ART2.2; Art; Rt6; Ly92b	Rt-6; Rt6-2; ART2.2; Art; Rt6; Ly92b
Mus musculus	MEEBO	ILMN_215226	ILMN_215226	C230069K22RIK	scl0243538.2_17	NM_173775.2			31343366	NM_173775.2	C230069K22Rik		ILMN_1236738	001580026	S	2403	CATGATGCAGAAGCAGCTGCAGGAGGAACGTCTGCAACGGGCTCGAGCCA										
Mus musculus	RefSeq	ILMN_200138	ILMN_200138	LOC385627	XM_358807.1	XM_358807.1			38080637	XM_358807.1	LOC385627		ILMN_2537719	000730403	S	499	TGACAGAGTGAGCTGGTGCCACAGAGAGCTGGGCCCTCCCACTTCAATCA										
Mus musculus	MEEBO	ILMN_186610	ILMN_186610	1700129I04RIK	scl067368.1_6						1700129I04Rik		ILMN_1224390	001470167	S	18	CGTGACCTATGCACTCTGCTCCTGGATTTTCCAAGTATCTTGGACCCTGC										
Mus musculus	RefSeq	ILMN_218468	ILMN_218468	GCSH	NM_026572.3	NM_026572.3		68133	146134992	NM_026572.3	Gcsh	NP_080848.1	ILMN_2696216	002120411	S	1238	CTGCTAGTTTTAGAAGGGTTGATTTTAATTATAGGATGTTCCAGTGTCTG				8qE1	Mus musculus glycine cleavage system protein H (aminomethyl carrier) (Gcsh), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A multienzyme complex that catalyzes the reversible oxidation of glycine. In E. coli, it has four components: dihydrolipoamide dehydrogenase, glycine dehydrogenase (decarboxylating), lipoyl-GcvH-protein and aminomethyltransferase [goid 5960] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid [goid 6546] [evidence IEA]	Interacting selectively with lipoic acid, 1,2-dithiolane-3-pentanoic acid [goid 31405] [evidence IEA]	1100001L02Rik; 5730591C18Rik	1100001L02Rik; 5730591C18Rik
Mus musculus	RefSeq	ILMN_200969	ILMN_224649	LOC546994	XM_621816.4	XM_621816.4		546994	149257977	XM_621816.4	LOC546994	XP_621816.4	ILMN_1218428	004480703	S	354	GGTGAAGGCTGTGCAATGTCAGGAAGAGGAATGTGCTACCATTCTGCTGG				7qF2	PREDICTED: Mus musculus similar to Ankyrin repeat domain-containing protein 26 (LOC546994), mRNA.					
Mus musculus	MEEBO	ILMN_195347	ILMN_195347	NCOA3	scl18321.1.1_218				6679025	NM_008679	Ncoa3		ILMN_1225608	006020068	S	20	CAGTAAGTGCCCAAGTCACAGAAAAAAGGGATGGCGAAGCCCATACTGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188945	ILMN_188945	FGR	scl24871.14_35				31542815	NM_010208	Fgr		ILMN_2772595	007570296	S	3210	CCTTCACTGAGCAGGACCCTGAGCAAATAAAAATGAGTAAGAGCTATTCC							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200157	ILMN_200157	LOC385825	XM_358960.1	XM_358960.1			38080730	XM_358960.1	LOC385825		ILMN_2537782	001990632	S	321	TCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACAC										
Mus musculus	RefSeq	ILMN_190476	ILMN_225658	LOC638050	XM_913925.2	XM_913925.2		638050	94372474	XM_913925.2	LOC638050	XP_919018.2	ILMN_2695684	000990176	S	2026	GGGGACAAGCCATATGTCTGTAGGGACTGTGGAAAGGGCTTCCGGCAAGC					PREDICTED: Mus musculus similar to Zinc finger and BTB domain containing 40 (LOC638050), mRNA.					
Mus musculus	RefSeq	ILMN_190476	ILMN_225658	LOC638050	XM_913925.2	XM_913925.2		638050	94372474	XM_913925.2	LOC638050	XP_919018.2	ILMN_2754515	006380278	S	6220	CCCCGTGAGATGTGAAAACTGATTGCAAACTAGAGCTGCTCGACATGCAC					PREDICTED: Mus musculus similar to Zinc finger and BTB domain containing 40 (LOC638050), mRNA.					
Mus musculus	RefSeq	ILMN_199637	ILMN_199637	LOC382816	XM_356692.1	XM_356692.1			38075410	XM_356692.1	LOC382816		ILMN_1222204	004040221	S	22	GGAGAGAACCTGAGCAGGTTTTGTAGCACCTGGGCTCCAGTTTCAAAAGC										
Mus musculus	RefSeq	ILMN_197766	ILMN_320134	LOC100045316	XM_001473975.1	XM_001473975.1		100045316	149251642	XM_001473975.1	LOC100045316	XP_001474025.1	ILMN_1212889	000240022	S	1051	CTCTCCTTCAGTTTGCCTGGGTTTGGCAAGGCGGAGCCCTGGAGTAAAAC					PREDICTED: Mus musculus similar to NonO/p54nrb homolog (LOC100045316), mRNA.					
Mus musculus	RefSeq	ILMN_217094	ILMN_310789	LOC100046883	XM_001476984.1	XM_001476984.1		100046883	149259254	XM_001476984.1	LOC100046883	XP_001477034.1	ILMN_2679037	007050446	S	1137	AGGACCACTGGTGACATGGACTTCTCTGTAGTCCCTTGGGGGCGGTTACT					PREDICTED: Mus musculus similar to CKLF-like MARVEL transmembrane domain containing 3 (LOC100046883), mRNA.					
Mus musculus	MEEBO	ILMN_196257	ILMN_196257	SCL000369.1_136	scl000369.1_136	AK085395.1			26102679	AK085395.1	scl000369.1_136		ILMN_2523071	005340315	S	20	CTTATTTATTTCCTTTGGCGTTCAGGGTTTGGTGCTACCTCGGAGCTGTT										
Mus musculus	RefSeq	ILMN_213104	ILMN_319542	LOC100046800	XM_001475821.1	XM_001475821.1		100046800	149269063	XM_001475821.1	LOC100046800	XP_001475871.1	ILMN_2633688	003420458	S	443	CCAACCAGCCTCGCCAGCTAATGGTGGGGTATTATGTGGGCAGTTCTGAG					PREDICTED: Mus musculus similar to Demilune cell and parotid protein 1, transcript variant 1 (LOC100046800), mRNA.					
Mus musculus	RefSeq	ILMN_217367	ILMN_319542	LOC100046800	XM_001475821.1	XM_001475821.1		100046800	149269063	XM_001475821.1	LOC100046800	XP_001475871.1	ILMN_2682380	004050014	S	446	ACCAGCCTCGCCAGCTAATGGTGGGGTATTATGTGGGCAGTTCTGAGTAC					PREDICTED: Mus musculus similar to Demilune cell and parotid protein 1, transcript variant 1 (LOC100046800), mRNA.					
Mus musculus	RefSeq	ILMN_233315	ILMN_233315	DEFCR26	NM_001079933.1	NM_001079933.1		626708	121247276	NM_001079933.1	Defcr26	NP_001073402.1	ILMN_2938932	004850050	S	106	CAGGAAGAGGACCAGGCTGTGTCTGTCTCCTTTGGAAATCCAGAAGGCTC	8	+	22728760-22728809	8qA2	Mus musculus defensin related cryptdin 26 (Defcr26), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	Riken	ILMN_203409	ILMN_203409	6720463J01RIK	ri|6720463J01|PX00059B12|AK032860|1365					AK032860	6720463J01Rik		ILMN_2557087	001660452	S	1171	CCCGTGCAGTACAATCCTTATACTGAGCCTTTATGGAAAGCTGCAGTGTC										
Mus musculus	MEEBO	ILMN_213472	ILMN_213472	4930459I23RIK	scl22861.4.1_258				51781083	XM_486467	4930459I23Rik		ILMN_1253001	005050017	S	1711	GCCCATCCCTCGTCCATATCCATATCGCACTTTTCTGTAAGTGCATTGAG										
Mus musculus	RefSeq	ILMN_217223	ILMN_217223	HNRPUL1	NM_144922.1	NM_144922.1		232989	21450322	NM_144922.1	Hnrpul1	NP_659171.1	ILMN_2680490	003780719	S	2464	GCCTACAACTATGGGAGCTATGGCCCCTACAATCCTGCCCCCTATACACC	7	-	25431624-25431673	7qA3	Mus musculus heterogeneous nuclear ribonucleoprotein U-like 1 (Hnrpul1), transcript variant 1, mRNA.				E1BAP5; E130317O14Rik; E1B-AP5; MGC78330; MGC36621	E1BAP5; E130317O14Rik; E1B-AP5; MGC78330; MGC36621
Mus musculus	RefSeq	ILMN_217223	ILMN_217223	HNRPUL1	NM_144922.1	NM_144922.1		232989	21450322	NM_144922.1	Hnrpul1	NP_659171.1	ILMN_2688427	005860092	S	2635	TACGACTATGGAGGCTACTCGGGCAGCACACAGGGGGGCACAAGCACACA	7	-	25431011-25431060	7qA3	Mus musculus heterogeneous nuclear ribonucleoprotein U-like 1 (Hnrpul1), transcript variant 1, mRNA.				E1BAP5; E130317O14Rik; E1B-AP5; MGC78330; MGC36621	E1BAP5; E130317O14Rik; E1B-AP5; MGC78330; MGC36621
Mus musculus	RefSeq	ILMN_197657	ILMN_326963	LOC100047343	XM_001478902.1	XM_001478902.1		100047343	149267133	XM_001478902.1	LOC100047343	XP_001478952.1	ILMN_1236956	006180768	S	258	GGTGGTATTGCGTGGTGGGGTCAGGTCCTGTTCTTGGAGCCTGGATACCT					PREDICTED: Mus musculus hypothetical protein LOC100047343 (LOC100047343), mRNA.					
Mus musculus	RefSeq	ILMN_213650	ILMN_248076	1700011F03RIK	NM_028825.2	NM_028825.2		74221	141802938	NM_028825.2	1700011F03Rik	NP_083101.1	ILMN_2639308	006480754	S	610	CCTTGATGCCATTTTACCAGTAGACGTGTGAGAATACCCGCTGTTTCAAC	6	-	70863230-70863257:70863258-70863279	6qC1	Mus musculus RIKEN cDNA 1700011F03 gene (1700011F03Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC58753	MGC58753
Mus musculus	RefSeq	ILMN_198880	ILMN_198880	LOC333307	XM_286106.2	XM_286106.2			38089283	XM_286106.2	LOC333307		ILMN_2533251	001470112	S	1769	CAGACTCTCGGCTGAAGGCCGCAAGAGCTACAAGCATTGGTGTTTTCCTG										
Mus musculus	RefSeq	ILMN_212429	ILMN_212429	CACNB3	NM_007581.2	NM_007581.2		12297	113680270	NM_007581.2	Cacnb3	NP_031607.2	ILMN_2702286	004150279	S	1793	ACTCGGAGCATGACCACAATGACCGGAACTGGCAGCGTAACCGGCCTTGG	15	+	98473935-98473984	15qF1	Mus musculus calcium channel, voltage-dependent, beta 3 subunit (Cacnb3), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cchb3; Beta3	Cchb3; Beta3
Mus musculus	RefSeq	ILMN_212429	ILMN_212429	CACNB3	NM_007581.2	NM_007581.2		12297	113680270	NM_007581.2	Cacnb3	NP_031607.2	ILMN_2626333	000630181	S	1745	TGCCCAGTGCTAACGGGCACGACCCCCAAGACCGGCTCCTAGCCCAGGAC	15	+	98473887-98473936	15qF1	Mus musculus calcium channel, voltage-dependent, beta 3 subunit (Cacnb3), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cchb3; Beta3	Cchb3; Beta3
Mus musculus	RefSeq	ILMN_212429	ILMN_212429	CACNB3	NM_007581.2	NM_007581.2		12297	113680270	NM_007581.2	Cacnb3	NP_031607.2	ILMN_3074710	000380474	I	400	TCCCCCATGTATGACGACTCCTACGTGCCCGGGTTTGAGGACTCGGAGGC	15	+	98465594-98465599:98465600-98465643	15qF1	Mus musculus calcium channel, voltage-dependent, beta 3 subunit (Cacnb3), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cchb3; Beta3	Cchb3; Beta3
Mus musculus	RefSeq	ILMN_212429	ILMN_212429	CACNB3	NM_007581.2	NM_007581.2		12297	113680270	NM_007581.2	Cacnb3	NP_031607.2	ILMN_3153753	001850192	A	2472	GCATCTGGTGAGACTAGGGAACTGGGGCATATTCAAGCCAAGAGCCAGCC	15	+	98474614-98474663	15qF1	Mus musculus calcium channel, voltage-dependent, beta 3 subunit (Cacnb3), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cchb3; Beta3	Cchb3; Beta3
Mus musculus	RefSeq	ILMN_210147	ILMN_210147	PFTK1	NM_011074.1	NM_011074.1		18647	6755043	NM_011074.1	Pftk1	NP_035204.1	ILMN_1220791	006550639	S	3946	GCAACCTCACTGCACAAAGTATTTGGAAAAGAAGTATGGGACTTAGTTTC	5	-	4804246-4804295	5qA1	Mus musculus PFTAIRE protein kinase 1 (Pftk1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]	mKIAA0834	mKIAA0834
Mus musculus	RefSeq	ILMN_210147	ILMN_210147	PFTK1	NM_011074.1	NM_011074.1		18647	6755043	NM_011074.1	Pftk1	NP_035204.1	ILMN_2805672	000840392	S	4230	TGCTCTATGTATGCGTCCATAGCAGACACTCATCTGTGAATATCGCTGGG	5	-	4803962-4804011	5qA1	Mus musculus PFTAIRE protein kinase 1 (Pftk1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]	mKIAA0834	mKIAA0834
Mus musculus	MEEBO	ILMN_188194	ILMN_188194	SLCO4C1	scl16447.14_182				27369941	NM_172658	Slco4c1		ILMN_2450570	003940452	S	10	CGGATATACATATTTAGAAAGAATACCTCCATTTGGAATAAAGTGAACAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISO]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISO]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197741	ILMN_197741	LOC229348	XM_143268.2	XM_143268.2			38077739	XM_143268.2	LOC229348		ILMN_2529205	006520653	S	650	CCAGATCCTACTGTCCTAGAAATAGACCAATTGGAAGACCACAGATGAGG										
Mus musculus	Riken	ILMN_203457	ILMN_203457	4831422N07RIK	ri|4831422N07|PX00101N22|AK029211|1205					AK029211	4831422N07Rik		ILMN_2557452	002510709	S	674	GAGGGGAAGAGCTACATACTCCCATCACCATGATGTTCTTGCCCCAACAC										
Mus musculus	RefSeq	ILMN_215420	ILMN_215420	SMO	NM_176996.3	NM_176996.3		319757	39812461	NM_176996.3	Smo	NP_795970.2	ILMN_2741611	004560468	S	2479	TGTGGCTGGTTGAGGCAGAGATCTCCCCAGAGTTAGAGAAGCGTTTGGGC	6	+	29709874-29709923	6qA3.3	Mus musculus smoothened homolog (Drosophila) (Smo), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus [goid 42307] [evidence IGI]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IGI]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43392] [evidence IGI]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 4926] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Smoh; bnb; E130215L21Rik	Smoh; bnb; E130215L21Rik
Mus musculus	RefSeq	ILMN_215420	ILMN_215420	SMO	NM_176996.3	NM_176996.3		319757	39812461	NM_176996.3	Smo	NP_795970.2	ILMN_2986978	001070593	S	3705	ATCCAGTGGGGAGGACCCTCTGACTTAAGGGACCACCTTGGGAAGCTTCT	6	+	29711100-29711149	6qA3.3	Mus musculus smoothened homolog (Drosophila) (Smo), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus [goid 42307] [evidence IGI]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IGI]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43392] [evidence IGI]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 4926] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Smoh; bnb; E130215L21Rik	Smoh; bnb; E130215L21Rik
Mus musculus	RefSeq	ILMN_215420	ILMN_215420	SMO	NM_176996.3	NM_176996.3		319757	39812461	NM_176996.3	Smo	NP_795970.2	ILMN_2741614	002810440	S	2484	GCTGGTTGAGGCAGAGATCTCCCCAGAGTTAGAGAAGCGTTTGGGCCGGA	6	+	29709879-29709928	6qA3.3	Mus musculus smoothened homolog (Drosophila) (Smo), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus [goid 42307] [evidence IGI]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IGI]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43392] [evidence IGI]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 4926] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Smoh; bnb; E130215L21Rik	Smoh; bnb; E130215L21Rik
Mus musculus	RefSeq	ILMN_213963	ILMN_213963	RNF128	NM_023270.3	NM_023270.3		66889	31581576	NM_023270.3	Rnf128	NP_075759.2	ILMN_1231910	002480110	S	464	TCAACGCCTGTAACCCGCACACCAATTTCACGGTGCCCACGGTTTGGGGG	X	+	134957447-134957496	XqF1	Mus musculus ring finger protein 128 (Rnf128), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42036] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISA]	1300002C13Rik; GRAIL; AI987883; Greul1	1300002C13Rik; GRAIL; AI987883; Greul1
Mus musculus	MEEBO	ILMN_214893	ILMN_214893	SEPX1	scl51004.4_55	NM_013759.1			7305478	NM_013759.1	Sepx1		ILMN_2755534	003800136	S	276	GCCACGAGTTCCTGAATGATGGCCCCAAGCGGGGACAATCAAGATTCTGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues [goid 30091] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin [goid 8113] [evidence IEA]; Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on oxidized methionine in peptide linkage with specificity for the R enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 318] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_254370	ILMN_254370	OLFR65	NM_013616.2	NM_013616.2		18365	22165350	NM_013616.2	Olfr65	NP_038644.1	ILMN_2907424	003890196	S	1703	CCTCATGTCGTCCACATCACAATGAGCTACATCTACTTTCTTTTCCCCCC	7	+	111055759-111055808	7qE3	Mus musculus olfactory receptor 65 (Olfr65), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	ORL670; Olfr64; 5'beta3; 5'[b]3; MOR1-1; FOO; MOR1-2	ORL670; Olfr64; 5'beta3; 5'[b]3; MOR1-1; FOO; MOR1-2
Mus musculus	RefSeq	ILMN_199900	ILMN_199900	LOC384046	XM_357385.1	XM_357385.1			38078838	XM_357385.1	LOC384046		ILMN_1214831	007100709	S	2974	CAGGAGCGCAGCGAGGAGCTGGACAAGCGTATTGGCACATTGGAGGACAA										
Mus musculus	RefSeq	ILMN_259922	ILMN_259922	4933407P14RIK	NM_001082535.1	NM_001082535.1		237958	126722668	NM_001082535.1	4933407P14Rik	NP_001076004.1	ILMN_3118445	003800563	A	1716	CTGTGGGCTCCAAGATGAAGCTGGAGGATGCGAAGGATTCCCGTACAACC	11	+	104049356-104049405	11qE1	Mus musculus RIKEN cDNA 4933407P14 gene (4933407P14Rik), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	IMP5; RP23-344E9.2	IMP5; RP23-344E9.2
Mus musculus	RefSeq	ILMN_259922	ILMN_259922	4933407P14RIK	NM_001082535.1	NM_001082535.1		237958	126722668	NM_001082535.1	4933407P14Rik	NP_001076004.1	ILMN_3043485	003440722	I	1997	GCTTGGCACCAGAGGGATGGGAGGGCACAGGAGAGGGCCAGGGTCTTTTT	11	+	104052257-104052306	11qE1	Mus musculus RIKEN cDNA 4933407P14 gene (4933407P14Rik), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	IMP5; RP23-344E9.2	IMP5; RP23-344E9.2
Mus musculus	RefSeq	ILMN_224075	ILMN_238006	COL13A1	NM_007731.2	NM_007731.2		12817	118131174	NM_007731.2	Col13a1	NP_031757.1	ILMN_2774315	000840519	S	2840	AAATAACCCCTTTCCCTTTTTGTTTACAAGACATTTTTGTATAAATCTGT	10	-	61301256-61301305	10qB4	Mus musculus collagen, type XIII, alpha 1 (Col13a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [pmid 11470398] [evidence IEP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [pmid 11470398] [evidence IEP]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197481	ILMN_326077	LOC632805	XR_031514.1	XR_031514.1		632805	149250572	XR_031514.1	LOC632805		ILMN_1241098	002690750	S	2330	AGCCCCTACCCCACCCACATAGGATGCACCCAAACTATGACCATGGGCCT					PREDICTED: Mus musculus similar to Rnf111 protein (LOC632805), misc RNA.					
Mus musculus	RefSeq	ILMN_194717	ILMN_194717	TM4SF5	NM_029360.1	NM_029360.1		75604	21312989	NM_029360.1	Tm4sf5	NP_083636.1	ILMN_2945330	003710491	S	786	GCCCCTTCCCCCAGTTCTGGTTTAGCCTTTGGAAAGAGTGTACGTGGGCC	11	+	70327192-70327241	11qB3	Mus musculus transmembrane 4 superfamily member 5 (Tm4sf5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			AI323987; 2010003F10Rik	AI323987; 2010003F10Rik
Mus musculus	RefSeq	ILMN_211571	ILMN_211571	THOC4	NM_011568.1	NM_011568.1		21681	6755762	NM_011568.1	Thoc4	NP_035698.1	ILMN_2617245	001820497	S	702	TAGAGGCACCGGCAGGAACTCAAAGCAGCAGCTTTCTGCAGAGGAGTTGG	11	-	120456322-120456371	11qE2	Mus musculus THO complex 4 (Thoc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	ALY; REF1; Refbp1	ALY; REF1; Refbp1
Mus musculus	RefSeq	ILMN_211571	ILMN_211571	THOC4	NM_011568.1	NM_011568.1		21681	6755762	NM_011568.1	Thoc4	NP_035698.1	ILMN_2747744	003420719	S	809	TCCACACAAGTAACAGGACCCAGAAGCCTCGCCTGTGATGCCTAGAGGGA	11	-	120456103-120456152	11qE2	Mus musculus THO complex 4 (Thoc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	ALY; REF1; Refbp1	ALY; REF1; Refbp1
Mus musculus	RefSeq	ILMN_199335	ILMN_199335	LOC385289	XM_358171.1	XM_358171.1			38096704	XM_358171.1	LOC385289		ILMN_1228131	004490082	S	316	CTTGCCTGCACACTGGCTAAAACGGTAAGATTGCTGTTGGGTTCATCCTC										
Mus musculus	RefSeq	ILMN_219074	ILMN_219074	E130309D02RIK	NM_172726.2	NM_172726.2		231868	31982101	NM_172726.2	E130309D02Rik	NP_766314.2	ILMN_2826191	000450086	S	1830	GAAAGCGAGTGGGCTCCACCCTCTGCAGAGAGCACTGTGGGTGTTTTTAG	5	-	143566675-143566724	5qG2	Mus musculus RIKEN cDNA E130309D02 gene (E130309D02Rik), mRNA.				A630028N22	A630028N22
Mus musculus	RefSeq	ILMN_212183	ILMN_212183	TERF2	NM_009353.1	NM_009353.1		21750	6678288	NM_009353.1	Terf2	NP_033379.1	ILMN_2912318	006760377	S	1972	AGCTCTGTATGTTGAGCCCAGATGAGAGATTTTTTCGTCCCTGTGGAATC	8	-	109959057-109959106	8qD3	Mus musculus telomeric repeat binding factor 2 (Terf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32206] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32206] [evidence IMP]; A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse [goid 31848] [evidence IMP]; A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse [goid 31848] [evidence IDA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TRF2	TRF2
Mus musculus	MEEBO	ILMN_186632	ILMN_186632	RNF10	scl26162.14.72_6				7710089	NM_016698	Rnf10		ILMN_2770819	003990601	S	2417	GATTCTGCTTTGGGTCCCACCAGCACTGAGGGCCATGGGGCCCTATCCCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_205956	ILMN_205956	C230033C19RIK	ri|C230033C19|PX00174B23|AK048738|2911					AK048738	C230033C19Rik		ILMN_1236647	003170241	S	691	CTGGCTACGTCTTCTTTGAGTACCAATTCAGAATGACCAGTGCCAGGAGA										
Mus musculus	MEEBO	ILMN_224096	ILMN_224096	CHST4	scl34335.3_203				31982527	NM_011998	Chst4		ILMN_2774681	003400431	S	1871	CGCGGCTCTTACCAAAGAGCTCCCAGAAACTTCCACAGAGACATAGACCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192580	ILMN_192580	D1ERTD396E	scl17063.15_85				31560324	NM_021421	D1Ertd396e		ILMN_2489405	005670270	S	18	AAATTGCTGATAGCTTATTGTTAATCTATGGCCACACAAGACTTCTCACA										
Mus musculus	MEEBO	ILMN_192580	ILMN_192580	D1ERTD396E	scl17063.15_85				31560324	NM_021421	D1Ertd396e		ILMN_2592515	001510156	S	2545	GAGCTGTCACTTAGACCCGGTAGGGAGCCTCGCTGACTGTTGACTGTACA										
Mus musculus	RefSeq	ILMN_223516	ILMN_223516	KCNN4	NM_008433.3	NM_008433.3		16534	141803303	NM_008433.3	Kcnn4	NP_032459.2	ILMN_2765032	004150224	S	1713	GACCCCTTAATCTCTGTTGGAGGAGGAGGTGCCTGGGGTCTAGGATGCTA	7	+	25169992-25170041	7qA3	Mus musculus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 (Kcnn4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IMP]; The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin [goid 46541] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IDA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IGI]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IDA]	IK1; SK4; KCA4; IKCA1; mIKCa1	IK1; SK4; KCA4; IKCA1; mIKCa1
Mus musculus	RefSeq	ILMN_220080	ILMN_220080	OASL1	NM_145209.3	NM_145209.3		231655	142381213	NM_145209.3	Oasl1	NP_660210.1	ILMN_2722380	000840259	S	901	TCTGTATCTACTGGACCAAGCACTACACGCTGCAGCACCCGGTCATCGAG	5	+	115382892-115382941	5qF	Mus musculus 2'-5' oligoadenylate synthetase-like 1 (Oasl1), mRNA.			Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	7530414C13Rik; oasl9	7530414C13Rik; oasl9
Mus musculus	RefSeq	ILMN_220080	ILMN_220080	OASL1	NM_145209.3	NM_145209.3		231655	142381213	NM_145209.3	Oasl1	NP_660210.1	ILMN_2717366	000240187	S	1778	GCCAGACACTCTTGTGTGACAATGGAATTCTGCAGTCCCCTGGGAAGTCA	5	+	115387574-115387623	5qF	Mus musculus 2'-5' oligoadenylate synthetase-like 1 (Oasl1), mRNA.			Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	7530414C13Rik; oasl9	7530414C13Rik; oasl9
Mus musculus	RefSeq	ILMN_213164	ILMN_213164	OLFR1201	NM_146895.1	NM_146895.1		258897	22129092	NM_146895.1	Olfr1201	NP_667106.1	ILMN_1226932	006660753	S	743	CCTTTGTACCCTGCATATTCATATATGCACGGCCACCAACTACTTTTCCT	2	+	88635283-88635332	2qE1	Mus musculus olfactory receptor 1201 (Olfr1201), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR230-2	MOR230-2
Mus musculus	RefSeq	ILMN_200519	ILMN_200519	LOC386460	XM_359283.1	XM_359283.1			38083092	XM_359283.1	LOC386460		ILMN_1225193	004850343	S	382	AGGCTCTTCTCAAGGGTGATCCCAGTGAACTGCTTAAGGGATGTAGAGTC										
Mus musculus	RefSeq	ILMN_212597	ILMN_212597	SYVN1	NM_028769.4	NM_028769.4		74126	40254387	NM_028769.4	Syvn1	NP_083045.3	ILMN_2628258	000010674	S	3239	CCTAGCTGCTGCTTCCTTCTTTTGGTTTTGTGTTACAGGAGTTTCTGGAG	19	+	6053573-6053622	19qA	Mus musculus synovial apoptosis inhibitor 1, synoviolin (Syvn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence ISO]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D530017H19Rik; Hrd1; AW211966; 1200010C09Rik; C85322	D530017H19Rik; Hrd1; AW211966; 1200010C09Rik; C85322
Mus musculus	RefSeq	ILMN_220965	ILMN_220965	DNA2	NM_177372.2	NM_177372.2		327762	142376001	NM_177372.2	Dna2	NP_796346.1	ILMN_2729224	006330471	S	3750	AGGATTTGATATAAATGTATTTCTGATATATTTCTGAGGCGTTTTGGTTC	10	+	62436588-62436637	10qB4	Mus musculus DNA replication helicase 2 homolog (yeast) (Dna2), mRNA.		The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	E130315B21Rik; mKIAA0083	E130315B21Rik; mKIAA0083
Mus musculus	RefSeq	ILMN_222645	ILMN_222645	CLDN18	NM_019815.2	NM_019815.2		56492	118130563	NM_019815.2	Cldn18	NP_062789.1	ILMN_1241689	004880402	S	2301	GGAGCTGTGTTGACCAAGAGCCAGGTTAATACGCAGAGTTTTTCCCACTG	9	-	99591653-99591702	9qE3.3	Mus musculus claudin 18 (Cldn18), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198399	ILMN_198399	LOC225897	XM_148897.3	XM_148897.3			25054872	XM_148897.3	LOC225897		ILMN_2531550	004480093	S	214	CGAAGGAGAACGTGGTCACGGGAACCTGTAAGGCTCCTTTCTTGGTGCTC										
Mus musculus	RefSeq	ILMN_212654	ILMN_212654	FAM108A	NM_145421.1	NM_145421.1		216169	21703839	NM_145421.1	Fam108a	NP_663396.1	ILMN_3163027	000650041	A	1036	TCGAGAAGGTGTCGAAGATCACGTCACCGGTGCTCATCATCCACGGCACA	10	-	80046744-80046793	10qC1	Mus musculus family with sequence similarity 108, member A (Fam108a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1700013O15Rik; MGC90979; BC005632; MGC11699	1700013O15Rik; MGC90979; BC005632; MGC11699
Mus musculus	Riken	ILMN_205112	ILMN_205112	D930017N16RIK	ri|D930017N16|PX00201P03|AK053021|845					AK053021	D930017N16Rik		ILMN_2570087	004640647	S	273	GCTAGAGTGAGAAATGTTGGCTTCTGTGGGATATGTATTAGGGGAAAGTC										
Mus musculus	MEEBO	ILMN_190128	ILMN_190128	IGHV1S122_AF025446_IG_HEAVY_VARIABLE_1S122_187	IGHV1S122_AF025446_Ig_heavy_variable_1S122_187						IGHV1S122_AF025446_Ig_heavy_variable_1S122_187		ILMN_1223092	002850706	S	1	GCTTTGAGTGGATTGGAGAGATTAATCCTAGCAATGGTGGTACTAACTAC										
Mus musculus	RefSeq	ILMN_200946	ILMN_200946	EG382265	XM_356374.4	XM_356374.4		382265	94408141	XM_356374.4	EG382265	XP_356374.1	ILMN_1258616	004260750	S	679	ATGCCAAATTTTTCCAATGCTCAAAGAGCAGGCAGAGCCATGGGATTGGC	X	+	120927234-120927283	XqE3	PREDICTED: Mus musculus predicted gene, EG382265 (EG382265), mRNA.					
Mus musculus	RefSeq	ILMN_261515	ILMN_261515	ZGPAT	NM_001048148.1	NM_001048148.1		229007	114326527	NM_001048148.1	Zgpat	NP_001041613.1	ILMN_3157372	004250619	A	1744	CAGCGGAAGGCAGACACTCACAGGAAGATGACAGAGTTCTAGCGGCCCTG	2	+	181115177-181115218:181115219-181115226	2qH4	Mus musculus zinc finger, CCCH-type with G patch domain (Zgpat), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC25688; 1500006I01Rik; MGC38468; BC021513	MGC25688; 1500006I01Rik; MGC38468; BC021513
Mus musculus	RefSeq	ILMN_261515	ILMN_261515	ZGPAT	NM_001048148.1	NM_001048148.1		229007	114326527	NM_001048148.1	Zgpat	NP_001041613.1	ILMN_3078143	006760730	I	152	AGCGGTTTTGGGGGCGGCGTTGCCCTGAGTTGTTCTTACTGCTCTTCCTC	2	+	181100279-181100328	2qH4	Mus musculus zinc finger, CCCH-type with G patch domain (Zgpat), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC25688; 1500006I01Rik; MGC38468; BC021513	MGC25688; 1500006I01Rik; MGC38468; BC021513
Mus musculus	Riken	ILMN_202237	ILMN_202237	AABP3-PENDING	ri|4833416M03|PX00028O22|AK014712|934					AK014712	Aabp3-pending		ILMN_1242994	004860246	S	283	CGCAGAGCCTCCAGCAGCAGGGGTTTCAGGTCTGCATTACATTTACTGAA										
Mus musculus	RefSeq	ILMN_216944	ILMN_216944	TSPAN11	NM_026743.2	NM_026743.2		68498	31541797	NM_026743.2	Tspan11	NP_081019.1	ILMN_2843163	005130471	S	3843	CTTAGAGATCACTCTCCATAAAGATGGGAGTCACACCATGTGGGGATCAC	6	+	127918284-127918333	6qF3	Mus musculus tetraspanin 11 (Tspan11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110014F12Rik	1110014F12Rik
Mus musculus	Riken	ILMN_206737	ILMN_206737	DDX24	ri|D230014B13|PX00188K23|AK084251|1649					AK084251	Ddx24		ILMN_1242395	006400564	S	1483	GGGATAAAGAGATAGAGGAGTGCACAGAGCCAGGCAGTGGTAGACTTGCC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	MEEBO	ILMN_220038	ILMN_220038	B230214G05	scl47634.3.1_71				51829854	XM_488753	B230214G05		ILMN_2716834	005260154	S	2461	CACCAGTCTCTCATGGACCTCTTACATCTCGGGAAACTTCTAGCCCTTGA										
Mus musculus	RefSeq	ILMN_204368	ILMN_213867	F5	NM_007976.2	NM_007976.2		14067	111185910	NM_007976.2	F5	NP_032002.1	ILMN_1248713	004610138	S	6708	AGAAACTCCTTCAAGCCTAAACCATTTAGAGCAGGCCCTATAGCATGGGT	1	+	166149707-166149756	1qH2.2	Mus musculus coagulation factor V (F5), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A secretory organelle found in blood platelets, which is unique in that it exhibits further compartmentalization and acquires its protein content via two distinct mechanisms: (1) biosynthesis predominantly at the megakaryocyte (MK) level (with some vestigial platelet synthesis) (e.g. platelet factor 4) and (2) endocytosis and pinocytosis at both the MK and circulating platelet levels (e.g. fibrinogen (Fg) and IgG) [goid 31091] [evidence IDA]	The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence IMP]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Cf-5; AI173222; Cf5	Cf-5; AI173222; Cf5
Mus musculus	RefSeq	ILMN_213867	ILMN_213867	F5	NM_007976.2	NM_007976.2		14067	111185910	NM_007976.2	F5	NP_032002.1	ILMN_1222970	007610441	S	6229	CTGCATCTTCATTTAAAAAGTCGTGGTGGGGAGACTACTGGGAGCCCTCC	1	+	166144560-166144609	1qH2.2	Mus musculus coagulation factor V (F5), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A secretory organelle found in blood platelets, which is unique in that it exhibits further compartmentalization and acquires its protein content via two distinct mechanisms: (1) biosynthesis predominantly at the megakaryocyte (MK) level (with some vestigial platelet synthesis) (e.g. platelet factor 4) and (2) endocytosis and pinocytosis at both the MK and circulating platelet levels (e.g. fibrinogen (Fg) and IgG) [goid 31091] [evidence IDA]	The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence IMP]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Cf-5; AI173222; Cf5	Cf-5; AI173222; Cf5
Mus musculus	RefSeq	ILMN_215729	ILMN_215729	EGR1	NM_007913.5	NM_007913.5		13653	76559936	NM_007913.5	Egr1	NP_031939.1	ILMN_2662926	006620079	S	3015	GCTTATAAACACATTGAATGCGCTCTATTGCCCATGGGATATGTGGTGTG	18	+	35024553-35024602	18qB1	Mus musculus early growth response 1 (Egr1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	egr; Zenk; NGFIA; TIS8; Krox-1; Krox-24; Zif268; Krox24; NGF1-A; A530045N19Rik; Egr-1; ETR103; Zfp-6; NGFI-A	egr; Zenk; NGFIA; TIS8; Krox-1; Krox-24; Zif268; Krox24; NGF1-A; A530045N19Rik; Egr-1; ETR103; Zfp-6; NGFI-A
Mus musculus	RefSeq	ILMN_218780	ILMN_253628	PRPF4	NM_027297.3	NM_027297.3		70052	84872208	NM_027297.3	Prpf4	NP_081573.1	ILMN_2700079	005420164	S	4416	GGGTTGTCGGAAGTTTTTAGCCCAGCTTCTATCTCCAGCTGCCCTCTGCT	4	+	62087203-62087252	4qB3	Mus musculus PRP4 pre-mRNA processing factor 4 homolog (yeast) (Prpf4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A complex composed of three small nuclear ribonucleoproteins, snRNP U4, snRNP U6 and snRNP U5 [goid 46540] [evidence ISO]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISO]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	bN189G18.1; 1600015H11Rik; AI874830; MGC117717	bN189G18.1; 1600015H11Rik; AI874830; MGC117717
Mus musculus	RefSeq	ILMN_218780	ILMN_253628	PRPF4	NM_027297.3	NM_027297.3		70052	84872208	NM_027297.3	Prpf4	NP_081573.1	ILMN_1253680	007200438	S	1797	GAGGAAGCCTGTCTTTAGGTGGTAGCAAGCCCTTCGTGGTTAGAACAAAA	4	+	62084584-62084633	4qB3	Mus musculus PRP4 pre-mRNA processing factor 4 homolog (yeast) (Prpf4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A complex composed of three small nuclear ribonucleoproteins, snRNP U4, snRNP U6 and snRNP U5 [goid 46540] [evidence ISO]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISO]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	bN189G18.1; 1600015H11Rik; AI874830; MGC117717	bN189G18.1; 1600015H11Rik; AI874830; MGC117717
Mus musculus	RefSeq	ILMN_197603	ILMN_259266	LOC627324	XM_621373.2	XM_621373.2		627324	94397501	XM_621373.2	LOC627324	XP_621373.2	ILMN_1221436	003830240	S	565	GGAGACTCGGTGACTCAGACAGAAGGTCCAGTGACATTGTCTGAAGGAAC					PREDICTED: Mus musculus similar to T-cell receptor alpha chain V region PY14 precursor (LOC627324), mRNA.					
Mus musculus	RefSeq	ILMN_217129	ILMN_217129	TMEM132E	NM_023438.2	NM_023438.2		270893	40254490	NM_023438.2	Tmem132e	NP_075927.2	ILMN_1229662	006480324	S	3977	TGCTCAAGCGCCTTGCCCATTTACCCAGCCACACCTCTTGGGTTCTACCC	11	+	82259701-82259750	11qC	Mus musculus transmembrane protein 132E (Tmem132e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm644	Gm644
Mus musculus	MEEBO	ILMN_210784	ILMN_210784	1110019K23RIK	scl068621.4_9	XM_132134.4			38080292	XM_132134.4	1110019K23Rik		ILMN_1234299	003420279	S	736	GACGATAGCGCACAGATACACCCCCAGAGAACAACTGAAGGCCCACACTC										
Mus musculus	RefSeq	ILMN_252752	ILMN_252752	SKAP1	NM_001033186.1	NM_001033186.1		78473	84794543	NM_001033186.1	Skap1	NP_001028358.1	ILMN_2918184	002000220	S	2034	CAGGGAGTCCTGCTCCTTTAACAGTCACCTGCACCTAGTTCTGCACGTTG	11	+	96575589-96575638	11qD	Mus musculus src family associated phosphoprotein 1 (Skap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence ISA]	1700091G21Rik; Skap-55; Scap1	1700091G21Rik; Skap-55; Scap1
Mus musculus	RefSeq	ILMN_199050	ILMN_199050	LOC331650	XM_288333.2	XM_288333.2			38090626	XM_288333.2	LOC331650		ILMN_2533868	003460437	S	744	GCTGCCCTGCGCACAGCTGAGAAATGCTTGGAACTCTTCGCGTCATTCTC										
Mus musculus	RefSeq	ILMN_219020	ILMN_219020	2310061C15RIK	NM_026844.3	NM_026844.3		66531	114051518	NM_026844.3	2310061C15Rik	NP_081120.2	ILMN_2743660	007100086	S	124	CTTGTCTCCACACTTGCACACCGAAGAATGCAACGTCCTGATTAACCTGC	8	-	119435047-119435096	8qE1	Mus musculus RIKEN cDNA 2310061C15 gene (2310061C15Rik), mRNA.				1110046L09Rik; DC13	1110046L09Rik; DC13
Mus musculus	RefSeq	ILMN_219020	ILMN_219020	2310061C15RIK	NM_026844.3	NM_026844.3		66531	114051518	NM_026844.3	2310061C15Rik	NP_081120.2	ILMN_2703204	006510400	S	420	CCTCTAGGACTCTTTGTATGAAAAGTGCTCTGAAGAACGGAACCATAGGG	8	-	119413555-119413604	8qE1	Mus musculus RIKEN cDNA 2310061C15 gene (2310061C15Rik), mRNA.				1110046L09Rik; DC13	1110046L09Rik; DC13
Mus musculus	RefSeq	ILMN_195733	ILMN_315040	4930413G21RIK	XM_001478471.1	XM_001478471.1		73951	149257991	XM_001478471.1	4930413G21Rik	XP_001478521.1	ILMN_1240432	004200079	S	640	CTCCGTTCTCCCAAAGACGCTGTCAGAGAATAAAGAATTAAATCCATGAG				7qF3	PREDICTED: Mus musculus RIKEN cDNA 4930413G21 gene (4930413G21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209509	ILMN_209509	CAMK2A	NM_177407.3	NM_177407.3		12322	142388229	NM_177407.3	Camk2a	NP_803126.1	ILMN_2596479	002630600	S	4544	CCTTGGGGGAATGCGTTTGCCAGGCCCCGTGCTGGCTTCTTTGTTACTAT	18	+	61147394-61147443	18qE1	Mus musculus calcium/calmodulin-dependent protein kinase II alpha (Camk2a), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a glutamate receptor [goid 35254] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	mKIAA0968; R74975; CaMKII	mKIAA0968; R74975; CaMKII
Mus musculus	RefSeq	ILMN_209509	ILMN_209509	CAMK2A	NM_177407.3	NM_177407.3		12322	142388229	NM_177407.3	Camk2a	NP_803126.1	ILMN_2677393	003060288	S	3318	GGACTTACGTTGCTGCCTCTCCGTGCTTTTGGTCTCTCTGTGGCTATGTT	18	+	61146168-61146217	18qE1	Mus musculus calcium/calmodulin-dependent protein kinase II alpha (Camk2a), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a glutamate receptor [goid 35254] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	mKIAA0968; R74975; CaMKII	mKIAA0968; R74975; CaMKII
Mus musculus	MEEBO	ILMN_195907	ILMN_195907	ADD1	scl27909.18_34				7304860	NM_013457	Add1		ILMN_2659062	003370228	S	393	GCAGATTGCAGATTTCATGACTGCGAGTGTACCAAATGTCTACCCGGCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	Riken	ILMN_205334	ILMN_205334	A630014C11RIK	ri|A630014C11|PX00144A17|AK041481|2227					AK041481	A630014C11Rik		ILMN_2571766	001980538	S	1756	GGCATAAGGCGGGTAGCTTCTAAGTCTAGTGGGGACATAGTGACTGCCTT										
Mus musculus	Riken	ILMN_206324	ILMN_206324	D330015H01RIK	ri|D330015H01|PX00191H20|AK084564|2133					AK084564	D330015H01Rik		ILMN_1254171	003120541	S	1952	GTGCCAAGACCCAGGTCCTCTGCAAGAACAACTACTGAGCCATCTCTCCC										
Mus musculus	RefSeq	ILMN_212043	ILMN_212043	IARS	NM_172015.1	NM_172015.1		105148	29789382	NM_172015.1	Iars	NP_742012.1	ILMN_2810047	004230093	S	4020	CCTTGGGCACTTGTCAAATATGCTGCTTTTAACCGGCGATTCTAATGGGA	13	+	49745842-49745891	13qA5	Mus musculus isoleucine-tRNA synthetase (Iars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence ISO]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence ISO]	2510016L12Rik; E430001P04Rik; ILRS; AI327140; AU044614	2510016L12Rik; E430001P04Rik; ILRS; AI327140; AU044614
Mus musculus	RefSeq	ILMN_212043	ILMN_212043	IARS	NM_172015.1	NM_172015.1		105148	29789382	NM_172015.1	Iars	NP_742012.1	ILMN_2810045	004220270	S	4115	CACCTATGCAGTCATGTTGGGGGAGTGTCCCAATGTTACCTCAACACCAC	13	+	49745937-49745986	13qA5	Mus musculus isoleucine-tRNA synthetase (Iars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence ISO]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence ISO]	2510016L12Rik; E430001P04Rik; ILRS; AI327140; AU044614	2510016L12Rik; E430001P04Rik; ILRS; AI327140; AU044614
Mus musculus	MEEBO	ILMN_211116	ILMN_211116	FBXO7	scl38604.10.1_9	NM_153195.1			23397416	NM_153195.1	Fbxo7		ILMN_2612683	003940224	S	1356	CCTCCAGGAATCATTGGTGGTGAATATGATGAGAGGCCGATACTGCCTAG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]			
Mus musculus	RefSeq	ILMN_222063	ILMN_233552	KDELC2	NM_212445.2	NM_212445.2		68304	55956900	NM_212445.2	Kdelc2	NP_997610.1	ILMN_2744074	001770243	S	3296	TATTTTCGCTTTATACCATTTTATAATATCCAAATTGGTTTTAAACTATG	9	+	53209624-53209673	9qA5.3	Mus musculus KDEL (Lys-Asp-Glu-Leu) containing 2 (Kdelc2), mRNA.				AW549401; 4833410J10Rik; 2010004J24Rik	AW549401; 4833410J10Rik; 2010004J24Rik
Mus musculus	Riken	ILMN_206545	ILMN_206545	C130078B07RIK	ri|C130078B07|PX00171C12|AK081796|3215					AK081796	C130078B07Rik		ILMN_2580895	001780725	S	2775	CCCGTTAATGATGGATGTGTCCTTGCTGATGCGTCCATGCCTTGGGGCTA										
Mus musculus	RefSeq	ILMN_187187	ILMN_187187	TRIM56	NM_201373.3	NM_201373.3		384309	146198557	NM_201373.3	Trim56	NP_958761.1	ILMN_2441921	000940382	S	3393	CCAATCCATCGGAGTAGAAACTCCCTCAATGAAGTATGGGGTCAGAGGTC				5qG2	Mus musculus tripartite motif-containing 56 (Trim56), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A130009K11Rik; Gm452; RNF109; MGC37358	A130009K11Rik; Gm452; RNF109; MGC37358
Mus musculus	MEEBO	ILMN_189640	ILMN_189640	TBX13	scl0021382.1_179						Tbx13		ILMN_2463080	000990750	S	13	GCCACATCATCTTCAACTCCATGCATCGTTATCAGCCCCGTTTCCACGTG										
Mus musculus	RefSeq	ILMN_188980	ILMN_188980	TSSC1	NM_201357.1	NM_201357.1		380752	41235737	NM_201357.1	Tssc1	NP_958745.1	ILMN_2457326	004590326	S	446	TGCAAGCACTGCTCAGACCCTGGAGCTGCTCTGTCACCTTGACAACTCGG	12	+	29513662-29513711	12qA2	Mus musculus tumor suppressing subtransferable candidate 1 (Tssc1), mRNA.				D12Ertd604e	D12Ertd604e
Mus musculus	RefSeq	ILMN_188980	ILMN_188980	TSSC1	NM_201357.1	NM_201357.1		380752	41235737	NM_201357.1	Tssc1	NP_958745.1	ILMN_1246849	006590722	S	265	ATAAAAATGTCCTCCTCCATCAAGCGGGTGAGATCTGGCACATCAGTGCC	12	+	29451678-29451727	12qA2	Mus musculus tumor suppressing subtransferable candidate 1 (Tssc1), mRNA.				D12Ertd604e	D12Ertd604e
Mus musculus	RefSeq	ILMN_188980	ILMN_188980	TSSC1	NM_201357.1	NM_201357.1		380752	41235737	NM_201357.1	Tssc1	NP_958745.1	ILMN_2903639	000520376	S	1523	AGGGTGTTGGAAGTTTAACTTTTCCCCAGTGTGTTTCCACCTTCCTGTTG	12	+	29552225-29552274	12qA2	Mus musculus tumor suppressing subtransferable candidate 1 (Tssc1), mRNA.				D12Ertd604e	D12Ertd604e
Mus musculus	RefSeq	ILMN_188980	ILMN_188980	TSSC1	NM_201357.1	NM_201357.1		380752	41235737	NM_201357.1	Tssc1	NP_958745.1	ILMN_2492161	001770669	S	156	CCTCAAACTGCGGAAACAGATGCCATTCGCTTCTTGGTTGGGACGCAGTC	12	+	29444951-29445000	12qA2	Mus musculus tumor suppressing subtransferable candidate 1 (Tssc1), mRNA.				D12Ertd604e	D12Ertd604e
Mus musculus	RefSeq	ILMN_188980	ILMN_188980	TSSC1	NM_201357.1	NM_201357.1		380752	41235737	NM_201357.1	Tssc1	NP_958745.1	ILMN_2457324	007560328	S	7	CCTGCAAGCACTGCTCAGACCCTGGAGCTGCTCTGTCACCTTGACAACTC	12	+	29436737-29436786	12qA2	Mus musculus tumor suppressing subtransferable candidate 1 (Tssc1), mRNA.				D12Ertd604e	D12Ertd604e
Mus musculus	RefSeq	ILMN_194354	ILMN_194354	VPS4A	NM_126165.1	NM_126165.1		116733	18699725	NM_126165.1	Vps4a	NP_569053.1	ILMN_2505668	005570102	S	8	GGGAGCTGCCAGGCCCCTGCTTTCACTCCTTGCCTCTTAACTTTGGCTAC	8	+	109555233-109555282	8qD3	Mus musculus vacuolar protein sorting 4a (yeast) (Vps4a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MGC11698; AI325971; 4930589C15Rik; AW553189	MGC11698; AI325971; 4930589C15Rik; AW553189
Mus musculus	RefSeq	ILMN_194354	ILMN_194354	VPS4A	NM_126165.1	NM_126165.1		116733	18699725	NM_126165.1	Vps4a	NP_569053.1	ILMN_2798803	002320367	S	1954	CCGTTTCCATCAGGAGAGACGGCAAACAGGCAGGTCTTTATCGCTGCCTT	8	+	109569535-109569584	8qD3	Mus musculus vacuolar protein sorting 4a (yeast) (Vps4a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MGC11698; AI325971; 4930589C15Rik; AW553189	MGC11698; AI325971; 4930589C15Rik; AW553189
Mus musculus	RefSeq	ILMN_198217	ILMN_326622	LOC624159	XR_034627.1	XR_034627.1		624159	149269482	XR_034627.1	LOC624159		ILMN_1259623	002370367	S	421	CCTGGACTGACAAATACTACTGTGCCTCATCGGCTGGGACCTAAAAGAGC				17qE2	PREDICTED: Mus musculus similar to ribosomal protein S6 (LOC624159), misc RNA.					
Mus musculus	RefSeq	ILMN_185175	ILMN_232355	SLA	NM_001029841.3	NM_001029841.3		20491	146198839	NM_001029841.3	Sla	NP_001025012.1	ILMN_1216337	004010707	S	946	GAGGGAGCAGAGAACCCACTCAGAGTGGACGAATCCCTTTTCAGCTATGG				15qD2	Mus musculus src-like adaptor (Sla), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Slap; Slap-1	Slap; Slap-1
Mus musculus	RefSeq	ILMN_185448	ILMN_185448	ZFP36L1	NM_007564.2	NM_007564.2		12192	31982488	NM_007564.2	Zfp36l1	NP_031590.1	ILMN_2780424	005720202	S	2741	ATTCCATGTGCCCATCTCAAGACATTCCGCTCGCAGATTTGTGGTTCTGG	12	-	81026793-81026842	12qC3	Mus musculus zinc finger protein 36, C3H type-like 1 (Zfp36l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IMP]; A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps: poly(A) tail shortening, deadenylylation-dependent decapping, and decay of the transcript body, and that can regulate mRNA stability [goid 288] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence ISO]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence ISO]	Berg36; cMG1; D530020L18Rik; AW742437; TIS11b; ERF1; Brf1; AW743212	Berg36; cMG1; D530020L18Rik; AW742437; TIS11b; ERF1; Brf1; AW743212
Mus musculus	RefSeq	ILMN_197183	ILMN_197183	LOC268652	XM_196093.1	XM_196093.1			25052948	XM_196093.1	LOC268652		ILMN_1223186	003460301	S	589	ACCACTTCCAACCTAAGCCAGAGGGGGAGTGCCATGGAGAGAAAAGCGGC										
Mus musculus	RefSeq	ILMN_200067	ILMN_200067	LOC385678	XM_358908.1	XM_358908.1			38080202	XM_358908.1	LOC385678		ILMN_1229816	003800440	S	137	GCACAGGTTATCCCTACCAGCAGAAGGGTGATTTGGGGTCTCTGAGGGAG										
Mus musculus	RefSeq	ILMN_222528	ILMN_222528	3110040N11RIK	NM_026077.3	NM_026077.3		67290	148747292	NM_026077.3	3110040N11Rik	NP_080353.1	ILMN_1255496	000620100	S	390	GGCCTCTACAACTCCAGAGGAGGTCTTGGAGAAGCTGAAAACAGAAGCTG				7qD3	Mus musculus RIKEN cDNA 3110040N11 gene (3110040N11Rik), mRNA.				AI851475	AI851475
Mus musculus	MEEBO	ILMN_187017	ILMN_187017	9626123_206	9626123_206						9626123_206		ILMN_2440449	002060682	S	13	TGTGATTATGGATGATCTAGGACAAAATCCCGATGGTGAAGATTTCACCG										
Mus musculus	RefSeq	ILMN_197298	ILMN_197298	LOC380862	XM_358445.1	XM_358445.1			38075045	XM_358445.1	LOC380862		ILMN_2527631	005860220	S	390	CGCCTGGGCCACTGCCCTGCTGGAGAACTAGACACTGAGTAACCGAAGAT										
Mus musculus	RefSeq	ILMN_184322	ILMN_251363	QSOX1	NM_023268.2	NM_023268.2		104009	68131558	NM_023268.2	Qsox1	NP_075757.1	ILMN_1239077	001340601	S	1719	CCCCAGCAAACATCGTCATAGACTCTTCTGCATCTAGACACACAGGCCGG	1	-	157626877-157626926	1qG3	Mus musculus quiescin Q6 sulfhydryl oxidase 1 (Qsox1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 4 R'C(R)SH + O2 = 2 R'C(R)S-S(R)CR' + 2 H2O [goid 16972] [evidence IEA]; Catalysis of the formation of disulfide bridges [goid 16971] [evidence ISA]	QSOX1; 1300003H02Rik; SOx; Qscn6	QSOX1; 1300003H02Rik; SOx; Qscn6
Mus musculus	RefSeq	ILMN_248912	ILMN_248912	B3GNT8	NM_001036740.2	NM_001036740.2		232984	92087052	NM_001036740.2	B3gnt8	NP_001031817.1	ILMN_3149776	005340349	A	1004	GGACTATCCAGCCTATGCGAGTGGAGGTGGCTATGTAATCTCAGGACGCC	7	+	26414038-26414087	7qA3	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 (B3gnt8), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]	B7galt7; MGC32391; BC025206; B3galt7	B7galt7; MGC32391; BC025206; B3galt7
Mus musculus	RefSeq	ILMN_222822	ILMN_222822	IRS3	NM_010571.3	NM_010571.3		16369	146134339	NM_010571.3	Irs3	NP_034701.1	ILMN_2755312	007150097	S	2070	CCCCTCACATGTTGGCAGCTAGATGTCATTGTGTCTCCTCAGCCAAAACA				5qG2	Mus musculus insulin receptor substrate 3 (Irs3), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC106831; AA408304	MGC106831; AA408304
Mus musculus	RefSeq	ILMN_194356	ILMN_246654	GALNT3	NM_015736.1	NM_015736.1		14425	7657109	NM_015736.1	Galnt3	NP_056551.1	ILMN_1254361	001940730	S	2772	CCAAATAGCTTTTCTGAAGTGACTATACTGTGTGTTTTCTCAGAGTACTT	2	-	65921529-65921578	2qC1.3	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (Galnt3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211376	ILMN_211376	EHMT2	NM_145830.1	NM_145830.1		110147	22164771	NM_145830.1	Ehmt2	NP_665829.1	ILMN_2615204	003610092	S	1306	AGTACATGGAGGTTCCTCTGGGGTCCCTGGAGCTGCCCAGCGAGGGGACC	17	+	35036700-35036749	17qB1	Mus musculus euchromatic histone lysine N-methyltransferase 2 (Ehmt2), transcript variant long, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IMP]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	NG36; Bat8; D17Ertd710e; G9a	NG36; Bat8; D17Ertd710e; G9a
Mus musculus	RefSeq	ILMN_220181	ILMN_220181	ABCA8B	NM_013851.1	NM_013851.1		27404	23956075	NM_013851.1	Abca8b	NP_038879.1	ILMN_2718700	005360553	S	4340	CACCTGGAGATATTTGCTGCAGTGAGGGGCTTGCGCAAAAGTCACGCTGC	11	-	109799767-109799816	11qE1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 8b (Abca8b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence ISO]	Abca8	Abca8
Mus musculus	RefSeq	ILMN_220181	ILMN_220181	ABCA8B	NM_013851.1	NM_013851.1		27404	23956075	NM_013851.1	Abca8b	NP_038879.1	ILMN_2956871	002140398	S	4989	CCAAGGAGCAGGAGCTGGATGGCCTTGAATTAGAAGAATTAGACTCCTCC	11	-	109795859-109795908	11qE1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 8b (Abca8b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence ISO]	Abca8	Abca8
Mus musculus	RefSeq	ILMN_220269	ILMN_220269	GPC3	NM_016697.2	NM_016697.2		14734	31980679	NM_016697.2	Gpc3	NP_057906.2	ILMN_2719973	003890500	S	1788	GCCGTCCCCACTGAAGATCCTCATCAGTGTGGCCATCTATGTGGCGTGCT	X	-	49625981-49626030	XqA5	Mus musculus glypican 3 (Gpc3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Branching of the ureteric bud [goid 1658] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity [goid 30513] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [evidence IMP]		OCI-5	OCI-5
Mus musculus	RefSeq	ILMN_220269	ILMN_220269	GPC3	NM_016697.2	NM_016697.2		14734	31980679	NM_016697.2	Gpc3	NP_057906.2	ILMN_2832979	003370136	S	1964	CCTCCTCCCACCACCATTAAGTAGGAGACTAACCGCGTGTTATGTTTTCG	X	-	49625805-49625854	XqA5	Mus musculus glypican 3 (Gpc3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Branching of the ureteric bud [goid 1658] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity [goid 30513] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [evidence IMP]		OCI-5	OCI-5
Mus musculus	MEEBO	ILMN_214113	ILMN_214113	SFXN2	scl000432.1_8	NM_053196.2			31981485	NM_053196.2	Sfxn2		ILMN_2644392	000770270	S	640	CGATGGGTGCCTTTTGCCGCTGTGGCTGCCGCTAACTGTGTCAATATCCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217371	ILMN_217371	DTX2	NM_023742.1	NM_023742.1		74198	12963808	NM_023742.1	Dtx2	NP_076231.1	ILMN_2907322	006980494	S	2486	GCAGGGACGATCACACTCCCAGCTTCAGGTCAGCTTCTTATACCTCAGAT	5	+	136508658-136508707	5qG2	Mus musculus deltex 2 homolog (Drosophila) (Dtx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU022494; Deltex2; AA408415; 2610524D08Rik	AU022494; Deltex2; AA408415; 2610524D08Rik
Mus musculus	RefSeq	ILMN_217371	ILMN_217371	DTX2	NM_023742.1	NM_023742.1		74198	12963808	NM_023742.1	Dtx2	NP_076231.1	ILMN_2907327	004120411	S	2157	TGACCGAAGACTGCCTGGAACAGCAGTGACCTCGGGCCTGCCTCTGCCGA	5	+	136508329-136508357:136508358-136508378	5qG2	Mus musculus deltex 2 homolog (Drosophila) (Dtx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU022494; Deltex2; AA408415; 2610524D08Rik	AU022494; Deltex2; AA408415; 2610524D08Rik
Mus musculus	RefSeq	ILMN_217371	ILMN_217371	DTX2	NM_023742.1	NM_023742.1		74198	12963808	NM_023742.1	Dtx2	NP_076231.1	ILMN_2709820	005890301	S	2403	AAGCTTAAGCTGGAGCTACCTCAGTGCACGGATGGGACCGGCCCTTCCAG	5	+	136508575-136508624	5qG2	Mus musculus deltex 2 homolog (Drosophila) (Dtx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU022494; Deltex2; AA408415; 2610524D08Rik	AU022494; Deltex2; AA408415; 2610524D08Rik
Mus musculus	RefSeq	ILMN_193112	ILMN_250901	SGCZ	NM_145841.1	NM_145841.1		244431	22003891	NM_145841.1	Sgcz	NP_665840.1	ILMN_1233549	007380678	S	776	CCTCAGATTCTCGACAGACAGTGTATGAACTGTGCGTCTGCCCCAATGGC	8	-	38586387-38586436	8qA4	Mus musculus sarcoglycan zeta (Sgcz), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC123466; C230085N17Rik; MGC123465	MGC123466; C230085N17Rik; MGC123465
Mus musculus	RefSeq	ILMN_191696	ILMN_250065	UST	NM_177387.3	NM_177387.3		338362	110556630	NM_177387.3	Ust	NP_796361.2	ILMN_1217991	000510274	S	1464	CGAGTTCTACCACTACGTCAGAGAACAATTCCACCTGCTCAAGCGCAAGC	10	-	7927321-7927370	10qA1	Mus musculus uronyl-2-sulfotransferase (Ust), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	D930010O20Rik	D930010O20Rik
Mus musculus	RefSeq	ILMN_216371	ILMN_216371	TBR1	NM_009322.3	NM_009322.3		21375	118130432	NM_009322.3	Tbr1	NP_033348.2	ILMN_2920503	004560474	S	3201	CGATGCCTGCCAGGCGGACTTAACTGGAGTTCTATGTGTTTCTCCCTTCC	2	+	61651395-61651444	2qC1.3	Mus musculus T-box brain gene 1 (Tbr1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_219527	ILMN_219527	ARHGAP1	NM_146124.3	NM_146124.3		228359	141803553	NM_146124.3	Arhgap1	NP_666236.2	ILMN_1223713	004670292	S	1840	CCGGCCCTGGAGGCCTCTGTTACCGTAAGACATTTTCTTTGCCTTATACC	2	+	91511231-91511280	2qE1	Mus musculus Rho GTPase activating protein 1 (Arhgap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence ISO]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence IDA]	B230365D05Rik; p50rhoGAP; MGC7050; MGC101942; C76222	B230365D05Rik; p50rhoGAP; MGC7050; MGC101942; C76222
Mus musculus	Riken	ILMN_206384	ILMN_206384	C030004B10RIK	ri|C030004B10|PX00073F24|AK081207|1122					AK081207	C030004B10Rik		ILMN_1259439	003710348	S	255	TGGCTTCAAAGCGTGGCAGGAAGCCCCTCGACTACTCCGTCTCGAGTGCG										
Mus musculus	RefSeq	ILMN_216634	ILMN_240015	1110034G24RIK	XM_001000361.1	XM_001000361.1		73747	94368736	XM_001000361.1	1110034G24Rik	XP_001000361.1	ILMN_1228053	003400725	S	365	CGGAAATCCCTGGATAGATTCTATGAAGCATTTGCCCATCCACTGCCAGG					PREDICTED: Mus musculus RIKEN cDNA 1110034G24 gene, transcript variant 1 (1110034G24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199549	ILMN_199549	LOC382720	XM_356640.1	XM_356640.1			38074158	XM_356640.1	LOC382720		ILMN_1214856	000110725	S	73	GGCTGCTTCTGGTATGGAGCAGTGGCTTTGAATAAGAAGGGGTATGAGGC										
Mus musculus	Riken	ILMN_206011	ILMN_206011	TCRD-V1	ri|B230303E21|PX00158H16|AK045683|2368					AK045683	Tcrd-V1		ILMN_1240124	002070112	S	2052	AGCCAGATCCTCCCGTGGCTTCCAATCAACTTTCCTTATGATGCCGCCTT								Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence TAS]; Interacting selectively with major histocompatibility complex molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42287] [evidence TAS]		
Mus musculus	RefSeq	ILMN_209998	ILMN_209998	OLFR1446	NM_146704.1	NM_146704.1		258699	22129428	NM_146704.1	Olfr1446	NP_666915.1	ILMN_2601208	001690673	S	436	ATCACTGCCTCTTATGGGATCAGTTTCATGAGTGCCTCCATCCATATTGC	19	-	12964580-12964629	19qA	Mus musculus olfactory receptor 1446 (Olfr1446), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-2	MOR202-2
Mus musculus	RefSeq	ILMN_215985	ILMN_215985	PGGT1B	NM_172627.3	NM_172627.3		225467	146198772	NM_172627.3	Pggt1b	NP_766215.1	ILMN_2666038	000610452	S	2609	GTTTGGTAAATCTTTAAATATAAACAGAATCACTGAAGTATACATAGTCA				18qC	Mus musculus protein geranylgeranyltransferase type I, beta subunit (Pggt1b), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: geranylgeranyl diphosphate + protein-cysteine = S-geranylgeranyl-protein + diphosphate. This reaction is the formation of a thioether linkage between the C-1 atom of the geranylgeranyl group and a cysteine residue fourth from the C-terminus of the protein. The protein substrates have the C-terminal sequence CA1A2X, where the terminal residue, X, is preferably leucine and A2 should not be aromatic. Known substrates include most g-subunits of heterotrimeric G proteins and Ras-related GTPases such as members of the Ras and Rac/Rho families [goid 4662] [evidence IEA]	2610100E13; BGG1; GGT1; 2010207C17Rik; AI551093; AI451237	2610100E13; BGG1; GGT1; 2010207C17Rik; AI551093; AI451237
Mus musculus	RefSeq	ILMN_199789	ILMN_199789	LOC386537	XM_359381.1	XM_359381.1			38077344	XM_359381.1	LOC386537		ILMN_1243645	005340709	S	354	GAACTCTTGCATTGAAGCAGTAGTTTCCCTTCAAGTACCCATACACAGTG										
Mus musculus	RefSeq	ILMN_214429	ILMN_214429	EFNA2	NM_007909.2	NM_007909.2		13637	75677399	NM_007909.2	Efna2	NP_031935.2	ILMN_2647949	004850189	S	1594	AAGTGTATACTGTGATTTATTTTAATGTATTCTTAAGGACAGAATGGAAA	10	+	79652218-79652267	10qC1	Mus musculus ephrin A2 (Efna2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cek7-L; Epl6; Elf-1; LERK-6; Ephrin-A2	Cek7-L; Epl6; Elf-1; LERK-6; Ephrin-A2
Mus musculus	RefSeq	ILMN_198921	ILMN_198921	LOC235086	XM_146674.3	XM_146674.3			38089778	XM_146674.3	LOC235086		ILMN_2533402	002710059	S	3887	ACACCTTGGATGTGTTTGGACAGACGCCTTCCCCTCGGAGGATGGGGGAG										
Mus musculus	RefSeq	ILMN_220172	ILMN_220172	EVI2A	NM_010161.3	NM_010161.3		14017	76253936	NM_010161.3	Evi2a	NP_034291.1	ILMN_3153285	005310021	A	733	AAAAGGTCAAAGCAAGTAGGCAAGCGCCAGCCGCGGAGCAACGGTGACTT	11	-	79340763-79340812	11qB5	Mus musculus ecotropic viral integration site 2a (Evi2a), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Evi-2; Evi2; AW491894	Evi-2; Evi2; AW491894
Mus musculus	RefSeq	ILMN_220172	ILMN_220172	EVI2A	NM_010161.3	NM_010161.3		14017	76253936	NM_010161.3	Evi2a	NP_034291.1	ILMN_1251669	006760255	S	1000	GGTGGTATTTCCCATCCACGTTTGCTCAGATGATCCAAAGTCTGACATGC	11	-	79340496-79340545	11qB5	Mus musculus ecotropic viral integration site 2a (Evi2a), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Evi-2; Evi2; AW491894	Evi-2; Evi2; AW491894
Mus musculus	RefSeq	ILMN_218444	ILMN_225427	CCDC150	NM_030025.1	NM_030025.1		78016	58037516	NM_030025.1	Ccdc150	NP_084301.1	ILMN_2695919	002140521	S	3739	GTGAAATGGCCACAGTAAGATGTTCTAGATGAATTTTGTACGATGTTCTC	1	+	54425503-54425552	1qC1.1	Mus musculus coiled-coil domain containing 150 (Ccdc150), mRNA.					
Mus musculus	RefSeq	ILMN_184137	ILMN_260609	HNT	NM_172290.3	NM_172290.3		235106	118130034	NM_172290.3	Hnt	NP_758494.2	ILMN_2681195	000070754	S	1068	GACTATGGGAACTACACATGTGTGGCCTCCAACAAGCTGGGTCACACCAA	9	-	28816830-28816879	9qA4	Mus musculus neurotrimin (Hnt), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	B230210G24Rik; R75390; 6230410L23Rik	B230210G24Rik; R75390; 6230410L23Rik
Mus musculus	RefSeq	ILMN_222696	ILMN_227871	1200015F23RIK	NM_001033136.2	NM_001033136.2		67809	118131146	NM_001033136.2	1200015F23Rik	NP_001028308.1	ILMN_2753515	000540309	S	1359	AACTCTGAAGCTAGAAAGTGGATGAAGCTGGCTCAGGAACTGCCAGACGT	2	-	118964092-118964141	2qE5	Mus musculus RIKEN cDNA 1200015F23 gene (1200015F23Rik), mRNA. XM_924991	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP23-15I21.5; AI131757	RP23-15I21.5; AI131757
Mus musculus	RefSeq	ILMN_227871	ILMN_227871	1200015F23RIK	NM_001033136.2	NM_001033136.2		67809	118131146	NM_001033136.2	1200015F23Rik	NP_001028308.1	ILMN_3150536	005310722	A	1921	GTCACACCCTACCTACGAGGACAAAAGGAGCCAGCACAGCCCAGGTACTG	2	-	118962936-118962985	2qE5	Mus musculus RIKEN cDNA 1200015F23 gene (1200015F23Rik), mRNA. XM_924991	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP23-15I21.5; AI131757	RP23-15I21.5; AI131757
Mus musculus	RefSeq	ILMN_227871	ILMN_227871	1200015F23RIK	NM_001033136.2	NM_001033136.2		67809	118131146	NM_001033136.2	1200015F23Rik	NP_001028308.1	ILMN_3071764	006650373	I	917	CATGTCAGACCTTACTGAGGAGGAGAGCGGGAAGAAGTCCTATGCCCTAA	2	-	118972076-118972125	2qE5	Mus musculus RIKEN cDNA 1200015F23 gene (1200015F23Rik), mRNA. XM_924991	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP23-15I21.5; AI131757	RP23-15I21.5; AI131757
Mus musculus	MEEBO	ILMN_189297	ILMN_189297	4933408F15	scl0004186.1_3				27370045	NM_172715	4933408F15		ILMN_1237778	002750743	S	16	TGCCTCCATGCACTCTGACTGCACTAGGGTGTCCCGTAGGTCACCCAGCT										
Mus musculus	RefSeq	ILMN_218275	ILMN_218275	CLCN1	NM_013491.2	NM_013491.2		12723	142383369	NM_013491.2	Clcn1	NP_038519.1	ILMN_1232468	003890563	S	2765	AATACAACTTCAATCCGGAAGACTCCTGGGGGGCCACCCCCTCCTGCAGA	6	+	42263875-42263924	6qB2.1	Mus musculus chloride channel 1 (Clcn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IMP]; A neurological process that causes the sequential depolarization of a neuron's cell membrane along an axon [goid 19227] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]	nmf355; adr; Clc-1; mto; Clc1; myotonia; MGC124486; SMCC1	nmf355; adr; Clc-1; mto; Clc1; myotonia; MGC124486; SMCC1
Mus musculus	RefSeq	ILMN_214437	ILMN_214437	A930001N09RIK	NM_029870.1	NM_029870.1		77128	30794195	NM_029870.1	A930001N09Rik	NP_084146.1	ILMN_2648034	003460360	S	3344	GTCCTCTAGTTTGCTTCCATAGTAGATAAGTTGGTGGCCACTTAGGTGTC	17	+	26909462-26909511	17qA3.3	Mus musculus RIKEN cDNA A930001N09 gene (A930001N09Rik), mRNA.					
Mus musculus	Riken	ILMN_206951	ILMN_206951	RGS9	ri|D630026G22|PX00197O06|AK085443|3471					AK085443	Rgs9		ILMN_1216553	005690039	S	3377	GCCAGTGTGTGCTTGTCATCATCTCAGCAGTAGGGAGGCAGAGACAGGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]		
Mus musculus	MEEBO	ILMN_217344	ILMN_217344	B230312C02RIK	scl18226.8.1_21	XM_205860.2			28489072	XM_205860.2	B230312C02Rik		ILMN_1236176	005810348	S	837	CAAGCAGCACCTTCTTGCTAAAAGAGGTTTCCTTCTCATGTCCCAGCGCA										
Mus musculus	RefSeq	ILMN_223776	ILMN_223776	NLRP9B	NM_194058.2	NM_194058.2		243874	52145306	NM_194058.2	Nlrp9b	NP_918947.2	ILMN_2769017	007100333	S	2889	AAACACTGAATAGCTTAAATCTGGACTGGAAAACCTTGGACCACTCTGGG	7	+	20634838-20634887	7qA3	Mus musculus NLR family, pyrin domain containing 9B (Nlrp9b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Nalp-delta; Nalp9b; Nlrp9	Nalp-delta; Nalp9b; Nlrp9
Mus musculus	MEEBO	ILMN_189609	ILMN_189609	WBP4	scl45265.10.1_1	NM_018765.1			9055379	NM_018765.1	Wbp4		ILMN_2462762	002320600	S	8	CCAAGCTCCTGTGCTTTGAATACTGTAGTGCTGCATTTTACATTTATGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195117	ILMN_195117	TM6SF2	NM_181540.3	NM_181540.3		107770	142366159	NM_181540.3	Tm6sf2	NP_853518.1	ILMN_2512740	004890743	S	1121	TGTGGCGGCCCGCCTTCTTCTTGCATGCAGCGCTGCCATCTTCGCCACAG	8	+	72603654-72603703	8qB3.3	Mus musculus transmembrane 6 superfamily member 2 (Tm6sf2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_188508	ILMN_188508	POU2F1	scl15996.18_22				6755129	NM_011137	Pou2f1		ILMN_2663366	006840368	S	2365	GAGCTGAGTGCAGAGCTGGGTTGCCACAGGCTTTCCTCACTACAGGGTGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IGI]; The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity [goid 30910] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_200379	ILMN_200379	LOC386372	XM_359190.1	XM_359190.1			38081472	XM_359190.1	LOC386372		ILMN_1259502	002260142	S	1151	GACCTGGGCAGAGAGCAGGCAGCGTAAGAGAACAAAAGGAAGAAGAGGAC										
Mus musculus	RefSeq	ILMN_186431	ILMN_186431	USF1	NM_009480.2	NM_009480.2		22278	118130360	NM_009480.2	Usf1	NP_033506.1	ILMN_1254639	005560520	S	1698	TACGGAAGGCTCTGGAGCCAGGGAGAACTGTAGGCAGGGGTGGGTTCACT	1	+	173348750-173348799	1qH3	Mus musculus upstream transcription factor 1 (Usf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter [goid 432] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_186431	ILMN_186431	USF1	NM_009480.2	NM_009480.2		22278	118130360	NM_009480.2	Usf1	NP_033506.1	ILMN_2435505	000520209	S	204	AGTTGGGAGATACAAAGTCCTCCGAAAAAAGACCGGCGCCTCGGATGAGC	1	+	173344589-173344638	1qH3	Mus musculus upstream transcription factor 1 (Usf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter [goid 432] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_188010	ILMN_188010	1700073E17RIK	scl29363.3.1_8				50233841	NM_001001987	1700073E17Rik		ILMN_2449074	006370259	S	10	CCAACAAACGCCTGTCATAGACTCATGGATCTGAGTTGGTGATGAAAAGG										
Mus musculus	RefSeq	ILMN_246422	ILMN_246422	OLFR804	NM_001011821.1	NM_001011821.1		258068	58801405	NM_001011821.1	Olfr804	NP_001011821.1	ILMN_3161495	004490360	S	806	CTAAAGGTGTAGCTCTGCTGTATACTTCAATCGCCCCTCTCCTGAATCCT	10	+	129142741-129142790	10qD3	Mus musculus olfactory receptor 804 (Olfr804), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR110-7	MOR110-7
Mus musculus	MEEBO	ILMN_215787	ILMN_215787	MIC2L1	scl54178.10_163	NM_138309.1			21489962	NM_138309.1	Mic2l1		ILMN_2663576	006650037	S	3149	GTAGGACAGGCCCACTGCCTCAGCCACTTGGGTCGTGGTTAGTACCAGTT										
Mus musculus	RefSeq	ILMN_213386	ILMN_213386	HSPE1	NM_008303.2	NM_008303.2		15528	31982267	NM_008303.2	Hspe1	NP_032329.1	ILMN_2960308	002650709	S	160	GCCGAAACTGTAACCAAAGGTGGCATTATGCTTCCAGAAAAGTCTCAAGG	1	+	55033659-55033708	1qC1.2	Mus musculus heat shock protein 1 (chaperonin 10) (Hspe1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	mt-cpn10; MGC117526; 10kDa	mt-cpn10; MGC117526; 10kDa
Mus musculus	RefSeq	ILMN_230371	ILMN_230371	LRBA	NM_001077687.1	NM_001077687.1		80877	117956394	NM_001077687.1	Lrba	NP_001071155.1	ILMN_3155041	005220333	A	7931	GTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGGAAATCGATCCTCTC	3	+	86549732-86549781	3qF1	Mus musculus LPS-responsive beige-like anchor (Lrba), transcript variant 3, mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence TAS]	Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISA]	Lab300; C80285; D3Ertd775e; Lba	Lab300; C80285; D3Ertd775e; Lba
Mus musculus	RefSeq	ILMN_203687	ILMN_230371	LRBA	NM_001077687.1	NM_001077687.1		80877	117956394	NM_001077687.1	Lrba	NP_001071155.1	ILMN_1237892	007040750	S	8647	AAATAGGGAGGAGACTAGAAAGAGCCACTGGGAGCGAGGAGAGCATCTGC	3	+	86550448-86550497	3qF1	Mus musculus LPS-responsive beige-like anchor (Lrba), transcript variant 3, mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence TAS]	Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISA]	Lab300; C80285; D3Ertd775e; Lba	Lab300; C80285; D3Ertd775e; Lba
Mus musculus	RefSeq	ILMN_200272	ILMN_200272	LOC386119	XM_359077.1	XM_359077.1			38081165	XM_359077.1	LOC386119		ILMN_2538180	003460408	S	311	GGCTGCTCTCAGTTCCAGAAGCCATCAATTGGGTGTGTGGCCTCCATGTG										
Mus musculus	RefSeq	ILMN_209191	ILMN_250486	CNOT3	NM_146176.2	NM_146176.2		232791	133892394	NM_146176.2	Cnot3	NP_666288.1	ILMN_2626584	003840554	S	1371	AGCTCCCAGCCACAACTCGGGTACTCCTGCACCCTATGCCCAGGCTGTGG	7	+	3607355-3607404	7qA1	Mus musculus CCR4-NOT transcription complex, subunit 3 (Cnot3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MGC40675; A930039N10Rik	MGC40675; A930039N10Rik
Mus musculus	RefSeq	ILMN_209191	ILMN_250486	CNOT3	NM_146176.2	NM_146176.2		232791	133892394	NM_146176.2	Cnot3	NP_666288.1	ILMN_1241764	006940189	S	2512	TTTGAGTACCGCTACCTGGAGGACCGGGACCTCCAGTGACACCGGCCCCC	7	+	3612390-3612428:3612429-3612439	7qA1	Mus musculus CCR4-NOT transcription complex, subunit 3 (Cnot3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MGC40675; A930039N10Rik	MGC40675; A930039N10Rik
Mus musculus	RefSeq	ILMN_209191	ILMN_250486	CNOT3	NM_146176.2	NM_146176.2		232791	133892394	NM_146176.2	Cnot3	NP_666288.1	ILMN_2593425	000940039	S	1299	CTCCACCCCTGGCAACAATGGGGCCTCTACCCCAGCAGCACCTACAAGTG	7	+	3607283-3607332	7qA1	Mus musculus CCR4-NOT transcription complex, subunit 3 (Cnot3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MGC40675; A930039N10Rik	MGC40675; A930039N10Rik
Mus musculus	RefSeq	ILMN_212839	ILMN_252391	AARS	NM_146217.3	NM_146217.3		234734	40254406	NM_146217.3	Aars	NP_666329.2	ILMN_1258394	002320767	S	3518	CAGCCTGAGGCTTTAGGTCTGCAGAGGAAGGAAGCCTTTTCTCTGCAGAA	8	+	113579397-113579446	8qE1	Mus musculus alanyl-tRNA synthetase (Aars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules [goid 43039] [evidence IEA]; The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6419] [evidence IEA]; The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21680] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups [goid 43200] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 34620] [evidence IMP]; The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically [goid 6400] [evidence IMP]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IMP]; The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6419] [evidence IMP]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala) [goid 4813] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the ligation of two substances via a carbon-oxygen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate, to form aminoacyl-tRNA or a related compound [goid 16876] [evidence IEA]	AI316495; sti; MGC37368; C76919	AI316495; sti; MGC37368; C76919
Mus musculus	RefSeq	ILMN_195994	ILMN_244274	LOC665270	XM_979248.1	XM_979248.1		665270	94374651	XM_979248.1	LOC665270	XP_984342.1	ILMN_1228570	006250364	S	2903	GGAGGTCAAGACTGATCTGATCCCTTACCATATCCTAAATGCCAGGCAGG	5	+	32606623-32606672	5qB1	PREDICTED: Mus musculus similar to phospholipase B, transcript variant 1 (LOC665270), mRNA.					
Mus musculus	RefSeq	ILMN_209511	ILMN_209511	PRR11	NM_175563.3	NM_175563.3		270906	31559867	NM_175563.3	Prr11	NP_780772.1	ILMN_2926068	006220671	S	2895	CTTGCAAGTGATCTGAGCCATACTCCCAGCTCCAGCATCACCTCTGATGC	11	-	86906208-86906257	11qC	Mus musculus proline rich 11 (Prr11), mRNA.				B930067F20Rik; RP23-352L3.4	B930067F20Rik; RP23-352L3.4
Mus musculus	RefSeq	ILMN_223506	ILMN_223506	6030468B19RIK	XM_126537.4	XM_126537.4		77727	94390956	XM_126537.4	6030468B19Rik	XP_126537.1	ILMN_2764919	007150180	S	883	TGGGCTTGCCTCCCTGCCCTGTACAAGAACCCACCAATGGAGCAAAAGAG	11	+	117668427-117668476	11qE2	PREDICTED: Mus musculus RIKEN cDNA 6030468B19 gene (6030468B19Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	MEEBO	ILMN_223884	ILMN_223884	CLPP	scl50582.4.1_9				8393155	NM_017393	Clpp		ILMN_2771009	005900154	S	910	ATGTGGATTGAGGTTGCCCTCAGAGCAGGGCAGACTGCCTGAGACACTGT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of misfolded or attenuated proteins [goid 6515] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]		
Mus musculus	RefSeq	ILMN_222078	ILMN_313492	ANG3	XM_001471990.1	XM_001471990.1		11730	149265892	XM_001471990.1	Ang3	XP_001472040.1	ILMN_2769355	001780372	S	257	GGCCTTATGGAGTAAACTTAAGAATAAGCAATTCTCGCTTCCAGATCACA				14qC1	PREDICTED: Mus musculus angiogenin, ribonuclease A family, member 3 (Ang3), mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186592	ILMN_186592	ZFP105	NM_009544.2	NM_009544.2		22646	113374172	NM_009544.2	Zfp105	NP_033570.2	ILMN_1245099	000670039	S	1591	GGCCTTCACTTGTAGCTCATACCTACTCATTCATCAAAGAATCCATAATG	9	+	122839733-122839782	9qF4	Mus musculus zinc finger protein 105 (Zfp105), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW557864	AW557864
Mus musculus	RefSeq	ILMN_200472	ILMN_200472	LOC384312	XM_357562.1	XM_357562.1			38082379	XM_357562.1	LOC384312		ILMN_2538880	003780026	S	149	GATCTGTATCCTTCATGGTGATGTGGTGCTGCAGGGCAACACAGGAGCCC										
Mus musculus	RefSeq	ILMN_206787	ILMN_246563	LMNA	NM_001002011.1	NM_001002011.1		16905	50355691	NM_001002011.1	Lmna	NP_001002011.1	ILMN_1221646	002320717	S	1939	GCTGAGTACAACCTGCGCTCACGCACCGTGCTGTGCGGGACGTGTGGGCA	3	-	88286454-88286503	3qF1	Mus musculus lamin A (Lmna), transcript variant 1, mRNA.	Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_246563	ILMN_246563	LMNA	NM_001002011.1	NM_001002011.1		16905	50355691	NM_001002011.1	Lmna	NP_001002011.1	ILMN_3121891	002320079	A	1578	CAACGAGGACCAGTCCATGGGCAACTGGCAGATCAGGCGTCAGAATGGTG	3	-	88288033-88288076:88288537-88288542	3qF1	Mus musculus lamin A (Lmna), transcript variant 1, mRNA.	Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217543	ILMN_217543	CPNE5	NM_153166.1	NM_153166.1		240058	23346610	NM_153166.1	Cpne5	NP_694806.1	ILMN_2877900	004860296	S	4221	ACGCTGTCCCATCAGCCCTCTAGGCAGCCATTCTGAGGCTGTACCCAAGA	17	-	29293561-29293610	17qA3.3	Mus musculus copine V (Cpne5), mRNA.				A830083G22Rik; MGC47475	A830083G22Rik; MGC47475
Mus musculus	RefSeq	ILMN_211764	ILMN_211764	PCDHB5	NM_053130.3	NM_053130.3		93876	113866013	NM_053130.3	Pcdhb5	NP_444360.1	ILMN_2619321	006350634	S	2911	ATCACTTATGTTGCCTGGATTTTTCTGTGTGGCTAGAATGTAACATAGGA	18	+	37482945-37482994	18qB3	Mus musculus protocadherin beta 5 (Pcdhb5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbE; Pcdhb4A	PcdhbE; Pcdhb4A
Mus musculus	RefSeq	ILMN_201101	ILMN_201101	LOC384786	XM_357866.1	XM_357866.1			38089126	XM_357866.1	LOC384786		ILMN_2541080	005080209	S	427	CAACACCTTCAGTGCGACCAAGATATCAAAGGGGGCGAGTCAGGAGACAG										
Mus musculus	RefSeq	ILMN_219087	ILMN_219087	SERPINA11	NM_199314.1	NM_199314.1		380780	40556295	NM_199314.1	Serpina11	NP_955018.1	ILMN_2704097	004200152	S	1350	GAGGCCACAGGAAGGCCCAACCTGCACGGCAGGACCCCCCTGCACGGCAG	12	-	105218506-105218555	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11 (Serpina11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Gm895; MGC37881	Gm895; MGC37881
Mus musculus	Riken	ILMN_206301	ILMN_206301	C230009B13RIK	ri|C230009B13|PX00173A06|AK082115|2108					AK082115	C230009B13Rik		ILMN_2579099	006900497	S	1927	TGGCCTGGCCCAGCAGGCCTCACAGAACATTGCAAGAATGGTCATCCAGT										
Mus musculus	RefSeq	ILMN_212930	ILMN_233675	1700009N14RIK	NM_001081095.1	NM_001081095.1		75471	124487357	NM_001081095.1	1700009N14Rik	NP_001074564.1	ILMN_1241746	003460082	S	567	TACTTACAAAAATGTGCCCAACTGGCATAGGGATCTGGTACGGGTGTGTG	4	+	39398116-39398165	4qA5	Mus musculus RIKEN cDNA 1700009N14 gene (1700009N14Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]	AI429145; RP23-143B14.1	AI429145; RP23-143B14.1
Mus musculus	RefSeq	ILMN_222850	ILMN_248823	ACBD7	XM_908788.2	XM_908788.2		78245	94366071	XM_908788.2	Acbd7	XP_913881.1	ILMN_2755739	003190446	S	277	GCGAGAGAGCTGATTGAGAAATATGGAATTTAGAAGGTGACGGAGAAATC				2qA1	PREDICTED: Mus musculus acyl-Coenzyme A binding domain containing 7 (Acbd7), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212660	ILMN_212660	PARVA	NM_020606.5	NM_020606.5		57342	117676371	NM_020606.5	Parva	NP_065631.3	ILMN_1242472	000290037	S	4311	GTCTGATTAAAAACCCTAATTATCTGCCTCCCCTCTTCCCCATCAGTCTC	7	+	119735063-119735112	7qF1	Mus musculus parvin, alpha (Parva), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	5430400F08Rik; CH-ILKBP; AU042898; Parvin; 2010012A22Rik; Actp; AI225929	5430400F08Rik; CH-ILKBP; AU042898; Parvin; 2010012A22Rik; Actp; AI225929
Mus musculus	MEEBO	ILMN_221481	ILMN_221481	DBPHT1	scl0020749.1_120	NM_019416.1			9507136	NM_019416.1	Dbpht1		ILMN_1247594	006550471	S	653	CAGCAATAGCAGCAACTCTTATTTGGATGCTAGACTTTGCCACGCAGATC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IPI]	Interacting selectively with nickel (Ni) ions [goid 16151] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus [goid 8139] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209479	ILMN_209479	LECT2	NM_010702.1	NM_010702.1		16841	6754529	NM_010702.1	Lect2	NP_034832.1	ILMN_1223634	000380538	S	452	TTAAGCCAATTAAGTATAAAGGTTCTATCAAAAAGGGGGAGAAGCTGGGC	13	-	56644158-56644207	13qB1	Mus musculus leukocyte cell-derived chemotaxin 2 (Lect2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]			
Mus musculus	RefSeq	ILMN_210353	ILMN_210353	ANKAR	NM_176980.3	NM_176980.3		319695	142387175	NM_176980.3	Ankar	NP_795954.1	ILMN_1257811	005910148	S	3821	GGAAGAGGGATTCAGATCTTAGCTGACAGTCTGAATTCAGTCCATGCTCC	1	-	72697522-72697571	1qC3	Mus musculus ankyrin and armadillo repeat containing (Ankar), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4932422E22Rik	4932422E22Rik
Mus musculus	RefSeq	ILMN_224184	ILMN_253837	OLFR285	NM_001011778.1	NM_001011778.1		257943	58801331	NM_001011778.1	Olfr285	NP_001011778.1	ILMN_2776153	006650240	S	580	GCCACTGCCATAGTCTGTACTTTTGTCATACACGCCTCTGGAACCTTCCT	15	-	98143350-98143399	15qF1	Mus musculus olfactory receptor 285 (Olfr285), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR160-3	MOR160-3
Mus musculus	RefSeq	ILMN_216276	ILMN_246657	TMEM41A	NM_025693.3	NM_025693.3		66664	146135073	NM_025693.3	Tmem41a	NP_079969.1	ILMN_1244836	006940224	S	955	GTGTGTGCAGAGGTCTGTTAGAAGGGCGTTTTGTCCTGTTCAGCAGGTTC				16qB1	Mus musculus transmembrane protein 41a (Tmem41a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2900010K02Rik; 5730578N08Rik	2900010K02Rik; 5730578N08Rik
Mus musculus	RefSeq	ILMN_220148	ILMN_220148	TUBB6	NM_026473.2	NM_026473.2		67951	27754055	NM_026473.2	Tubb6	NP_080749.2	ILMN_2718217	000670360	S	1667	GCCACACAGTGCTGCCTTAAGTGAATGCACACTATGGAACTTTATGACAA	18	+	67561798-67561806:67560964-67561004	18qE1	Mus musculus tubulin, beta 6 (Tubb6), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	BB220206; 2310057H16Rik	BB220206; 2310057H16Rik
Mus musculus	RefSeq	ILMN_206452	ILMN_315228	LOC100039514	XM_001473142.1	XM_001473142.1		100039514	149255051	XM_001473142.1	LOC100039514	XP_001473192.1	ILMN_2580180	004760195	S	607	GTCCTGGATTAGCATTTAGTGGGCTGATCTTTCAGAGTGGGCAGGAGTGG	6	+	36677230-36677279	6qB1	PREDICTED: Mus musculus similar to gag protein (LOC100039514), mRNA.					
Mus musculus	RefSeq	ILMN_195731	ILMN_195731	V1RH13	NM_134238.1	NM_134238.1		171272	21955265	NM_134238.1	V1rh13	NP_598999.1	ILMN_1232228	001070736	S	809	AATCTGTGACCCTTGGTTATGCAGTTTCCAGCCCCCTCCTGCTGATTCAC	13	+	23255320-23255369	13qA3.1	Mus musculus vomeronasal 1 receptor, H13 (V1rh13), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_192355	ILMN_252692	4933425M15RIK	NM_175674.2	NM_175674.2		319217	31342302	NM_175674.2	4933425M15Rik	NP_783605.1	ILMN_2756531	004230739	S	2189	GAAGAATATAGGGAAAATGCAGTACTTGAAAATAAACCTAACTTTGAGTC	3	-	64519689-64519738	3qE1	Mus musculus RIKEN cDNA 4933425M15 gene (4933425M15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_229881	ILMN_229881	TPMT	NM_016785.1	NM_016785.1		22017	7949153	NM_016785.1	Tpmt	NP_058065.1	ILMN_2800466	002320377	S	795	AGAGGTAGACGCTTTGGAAGAAAGGCATAAAGCCTGGGGTCTTGACTACC	13	-	47120768-47120817	13qA5	Mus musculus thiopurine methyltransferase (Tpmt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + a thiopurine = S-adenosyl-L-homocysteine + a thiopurine S-methylether [goid 8119] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + a thiopurine = S-adenosyl-L-homocysteine + a thiopurine S-methylether [goid 8119] [evidence ISS]		
Mus musculus	RefSeq	ILMN_218651	ILMN_218651	KHK	NM_008439.3	NM_008439.3		16548	118130797	NM_008439.3	Khk	NP_032465.2	ILMN_2698564	006840014	S	874	GCTGGCAAGAAGTGTGGCTTGCAGGGGTTTGATGGCATTGTGTGAGAGGC	5	+	31233376-31233420:31233421-31233425	5qB1	Mus musculus ketohexokinase (Khk), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose = ADP + D-fructose 1-phosphate [goid 4454] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218651	ILMN_218651	KHK	NM_008439.3	NM_008439.3		16548	118130797	NM_008439.3	Khk	NP_032465.2	ILMN_2725617	000020010	S	369	CCTGCCAGATGTGTCTGCTAAGGACTTTGAGAAGGTCGATCTGACCCGGT	5	+	31230819-31230868	5qB1	Mus musculus ketohexokinase (Khk), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose = ADP + D-fructose 1-phosphate [goid 4454] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198878	ILMN_246333	LOC384830	XR_002540.1	XR_002540.1		384830	94385076	XR_002540.1	LOC384830		ILMN_1253055	006100044	S	1560	GCCCTATTGGATGCTGCTATGGTGTTCTCCTTGCTAACTACAGGTGAAGC				8qB3.1	PREDICTED: Mus musculus similar to heat shock protein 1 (chaperonin) (LOC384830), mRNA.					
Mus musculus	RefSeq	ILMN_219773	ILMN_219773	HNMT	NM_080462.2	NM_080462.2		140483	144922616	NM_080462.2	Hnmt	NP_536710.1	ILMN_2713463	006590576	S	1319	TGATTCTCTAATGACAAAATGTAAGTATTTCTCTACCTGTACTGAAGTGT	2	-	23858702-23858751	2qA3	Mus musculus histamine N-methyltransferase (Hnmt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates levels of neurotransmitter [goid 1505] [evidence TAS]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + histamine = S-adenosyl-L-homocysteine + Nt-methylhistamine [goid 46539] [evidence IEA]	AI788969; 1500031F01Rik	AI788969; 1500031F01Rik
Mus musculus	RefSeq	ILMN_195709	ILMN_233962	ENSMUSG00000054212	NM_145433.1	NM_145433.1		217038	21703863	NM_145433.1	ENSMUSG00000054212	NP_663408.2	ILMN_2649654	001300392	S	2367	GGAATCCTGGATGTTGTAAGAGTTGGGGTGAGTTGCCTCCATGCCTCCTT	11	-	84626623-84626672	11qC	Mus musculus predicted gene, ENSMUSG00000054212 (ENSMUSG00000054212), nuclear gene encoding mitochondrial protein, mRNA.				A530065E19Rik	A530065E19Rik
Mus musculus	Riken	ILMN_202879	ILMN_202879	VRK1	ri|A330060H04|PX00132F07|AK039554|801					AK039554	Vrk1		ILMN_1229309	003610731	S	611	GTGCAAGAGGCCGCACAGACCCGTTCCCGAACCAGAAAGAAAGCCCAGAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199263	ILMN_318728	LOC100041430	XM_001476372.1	XM_001476372.1		100041430	149264260	XM_001476372.1	LOC100041430	XP_001476422.1	ILMN_1248593	004280196	S	985	GCTTTCTCACGACACAGTGGTCTCCAACTGCATAAAAGAACTCATACTGG	13	+	62376401-62376450	13qB3	PREDICTED: Mus musculus similar to crooked legs CG14938-PB (LOC100041430), mRNA.					
Mus musculus	RefSeq	ILMN_218804	ILMN_218804	STOML1	NM_026942.2	NM_026942.2		69106	27754034	NM_026942.2	Stoml1	NP_081218.2	ILMN_2747202	007210091	S	396	CCTGCCCTTTATTGACTCCTTCCAGAGGGTAGATTTGAGGACCCGAGCCT	9	+	58104527-58104576	9qB	Mus musculus stomatin-like 1 (Stoml1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		 [goid 5498] [evidence IEA]	WPB72; UNC-24; 1810015E19Rik; STORP; SLP-1; AI847431	WPB72; UNC-24; 1810015E19Rik; STORP; SLP-1; AI847431
Mus musculus	RefSeq	ILMN_218804	ILMN_218804	STOML1	NM_026942.2	NM_026942.2		69106	27754034	NM_026942.2	Stoml1	NP_081218.2	ILMN_1251005	005960014	S	393	CTCCTGCCCTTTATTGACTCCTTCCAGAGGGTAGATTTGAGGACCCGAGC	9	+	58104524-58104573	9qB	Mus musculus stomatin-like 1 (Stoml1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		 [goid 5498] [evidence IEA]	WPB72; UNC-24; 1810015E19Rik; STORP; SLP-1; AI847431	WPB72; UNC-24; 1810015E19Rik; STORP; SLP-1; AI847431
Mus musculus	RefSeq	ILMN_218804	ILMN_218804	STOML1	NM_026942.2	NM_026942.2		69106	27754034	NM_026942.2	Stoml1	NP_081218.2	ILMN_1222000	007050497	S	1143	TGAAGCAGACTTGCAGGCCTTGTTGAGCAAAGAACTTCGGCCCTTAGGGG	9	+	58109514-58109563	9qB	Mus musculus stomatin-like 1 (Stoml1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		 [goid 5498] [evidence IEA]	WPB72; UNC-24; 1810015E19Rik; STORP; SLP-1; AI847431	WPB72; UNC-24; 1810015E19Rik; STORP; SLP-1; AI847431
Mus musculus	Riken	ILMN_206783	ILMN_206783	E030038K17RIK	ri|E030038K17|PX00206P18|AK087250|2061					AK087250	E030038K17Rik		ILMN_2582672	006110626	S	1734	CTGGTATGCAGGCCTACTGATGTGTGACCCCTGGGAAAGGGTTGTTCAAC										
Mus musculus	RefSeq	ILMN_197419	ILMN_197419	LOC329503	XM_285380.1	XM_285380.1			28487533	XM_285380.1	LOC329503		ILMN_2528071	001470193	S	302	TACACGAAGGACCAGAGCGGGTGCACAAGGGGCTCAAGCACAGGCATTTG										
Mus musculus	RefSeq	ILMN_215993	ILMN_215993	ADCY3	NM_138305.2	NM_138305.2		104111	24475810	NM_138305.2	Adcy3	NP_612178.1	ILMN_1246856	004150681	S	3603	GGTCCACATAGGAAGGGGGATTTTTTTGGAAGCAGTGAAAAGCTTTGGGA	12	+	4212807-4212856	12qA1.1	Mus musculus adenylate cyclase 3 (Adcy3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS];  [goid 16849] [evidence IEA]	mKIAA0511; AC3	mKIAA0511; AC3
Mus musculus	RefSeq	ILMN_215993	ILMN_215993	ADCY3	NM_138305.2	NM_138305.2		104111	24475810	NM_138305.2	Adcy3	NP_612178.1	ILMN_2666118	001500019	S	3574	AACCCCTGAGCGACCTCTGGCTCCACAGTGGTCCACATAGGAAGGGGGAT	12	+	4212778-4212787:4212788-4212827	12qA1.1	Mus musculus adenylate cyclase 3 (Adcy3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS];  [goid 16849] [evidence IEA]	mKIAA0511; AC3	mKIAA0511; AC3
Mus musculus	RefSeq	ILMN_211468	ILMN_211468	OLFR1394	NM_146276.1	NM_146276.1		258273	22129734	NM_146276.1	Olfr1394	NP_666388.1	ILMN_2616214	001500100	S	768	AGCCATATTTAGCTACATGCAGCGAGCCTCGGCTAGAACACCACTGGGGG	11	+	48974285-48974334	11qB1.2	Mus musculus olfactory receptor 1394 (Olfr1394), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC157519; RP23-10M12.2; MOR280-1	MGC157519; RP23-10M12.2; MOR280-1
Mus musculus	RefSeq	ILMN_199705	ILMN_199705	LOC383850	XM_357292.1	XM_357292.1			38076276	XM_357292.1	LOC383850		ILMN_2536184	003290477	S	283	CTTGTGTTCATTGTGGATGTCAAGGCCAGCAAGCATCAGATCAAGCAGGC										
Mus musculus	RefSeq	ILMN_186285	ILMN_328548	LOC100047468	XM_001478485.1	XM_001478485.1		100047468	149258856	XM_001478485.1	LOC100047468	XP_001478535.1	ILMN_1257150	000290035	S	749	AGCTCTGGTGACCCCCAAAGTACCCGGGTGCAGGGACAGAGGTCTGATGA					PREDICTED: Mus musculus similar to Thioredoxin-like 6 (LOC100047468), mRNA.					
Mus musculus	RefSeq	ILMN_215755	ILMN_215755	CSNK2A1	NM_007788.2	NM_007788.2		12995	31542426	NM_007788.2	Csnk2a1	NP_031814.2	ILMN_1223808	001400279	S	3651	CTCTGGTGTGCCACCGAAGAGCCCTTTAAATAAATCGAAGCTTAAAAGAA	2	+	152107145-152107194	2qG3	Mus musculus casein kinase 2, alpha 1 polypeptide (Csnk2a1), mRNA.	Complex that possesses casein kinase activity, found in nearly every subcellular compartment. Protein kinase CK2 complexes are usually tetramers of two alpha and two beta subunits, and can phosphorylate many protein substrates in addition to casein [goid 5956] [evidence TAS]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulation of the activity of a protein phosphatase enzyme [goid 19888] [evidence IDA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]	Csnk2a1-rs4; MGC102141	Csnk2a1-rs4; MGC102141
Mus musculus	RefSeq	ILMN_197966	ILMN_197966	LOC239731	XM_155825.3	XM_155825.3			28494285	XM_155825.3	LOC239731		ILMN_2530003	006330110	S	262	CTCCGGGAGCTGCGGCAGCTGCAGGAGGAGGTGCAGCGCGAGCGTGAGGC										
Mus musculus	RefSeq	ILMN_220366	ILMN_220366	4831428F09RIK	NM_172844.1	NM_172844.1		240894	27370271	NM_172844.1	4831428F09Rik	NP_766432.1	ILMN_2864559	002650039	S	2715	ATGACCTCGCATCCCAGAGGGCACGTCAAGAAGCTGAAGCATCACAAGGC	1	-	168499030-168499079	1qH2.3	Mus musculus RIKEN cDNA 4831428F09 gene (4831428F09Rik), mRNA.					
Mus musculus	MEEBO	ILMN_192724	ILMN_192724	1500005K14RIK	scl39926.3_137				51828560	XM_203453	1500005K14Rik		ILMN_1259764	006510736	S	17	TCACCGATTCTCCAAATCTGCTACGAAAGCCACAGGCCTGGAAGCTGGGC										
Mus musculus	Riken	ILMN_206256	ILMN_206256	C230081H03RIK	ri|C230081H03|PX00176B18|AK082671|1504					AK082671	C230081H03Rik		ILMN_1224444	007040682	S	832	GGACTATGTGAAGATTCCACGCGGAGTCCGTGGCTCTGAGTCAGATGTGT										
Mus musculus	RefSeq	ILMN_197012	ILMN_197012	LOC381302	XM_355244.1	XM_355244.1			38073490	XM_355244.1	LOC381302		ILMN_2697918	007040132	S	2403	GGGGGTTCTTCTCAGGGTTCTGTATGATGGCCCAAGTCTCTGTACCGCTG										
Mus musculus	RefSeq	ILMN_212746	ILMN_212746	EPHA3	NM_010140.1	NM_010140.1		13837	31982447	NM_010140.1	Epha3	NP_034270.1	ILMN_2629804	006760050	S	2972	GGTTGGTGTCACTGTGGTTGGGCCACAGAAGAAGATCATCAGCACCATTA	16	-	63488376-63488425	16qC1.3	Mus musculus Eph receptor A3 (Epha3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IDA]	Mek4; ETK1; End3; Hek; Tyro4; Cek4; AW492086; Hek4	Mek4; ETK1; End3; Hek; Tyro4; Cek4; AW492086; Hek4
Mus musculus	RefSeq	ILMN_212746	ILMN_212746	EPHA3	NM_010140.1	NM_010140.1		13837	31982447	NM_010140.1	Epha3	NP_034270.1	ILMN_2831656	000620736	S	3878	TGCTTTCCCTGTTCCTACTGTCACCAAATCACTCACAGTCTGAATATCCC	16	-	63487470-63487519	16qC1.3	Mus musculus Eph receptor A3 (Epha3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IDA]	Mek4; ETK1; End3; Hek; Tyro4; Cek4; AW492086; Hek4	Mek4; ETK1; End3; Hek; Tyro4; Cek4; AW492086; Hek4
Mus musculus	RefSeq	ILMN_201573	ILMN_201573	ZFAT	NM_198644.1	NM_198644.1		380993	38348525	NM_198644.1	Zfat	NP_941046.1	ILMN_1234142	002480292	S	4207	AGTGGCCTTATGTCTTTTGAGTTAACCACTGGGTAGGGTGGGGCAGGGCC	15	-	67915448-67915497	15qD2	Mus musculus zinc finger and AT hook domain containing (Zfat), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC56951; Zfp406; Gm922	MGC56951; Zfp406; Gm922
Mus musculus	RefSeq	ILMN_201573	ILMN_201573	ZFAT	NM_198644.1	NM_198644.1		380993	38348525	NM_198644.1	Zfat	NP_941046.1	ILMN_2985411	001030717	S	3726	CAGGGTGGGGAGGCCTCAGAGTTCATCGTATACGTGCAAGAGGCTGTACA	15	-	67915929-67915978	15qD2	Mus musculus zinc finger and AT hook domain containing (Zfat), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC56951; Zfp406; Gm922	MGC56951; Zfp406; Gm922
Mus musculus	RefSeq	ILMN_223842	ILMN_253484	IL17RB	NM_019583.3	NM_019583.3		50905	142368701	NM_019583.3	Il17rb	NP_062529.2	ILMN_2770260	006450176	S	1873	TGAGAACCACGCACTCTGGCCATGAGGTAATACGGCACTTCCCTGTCAGG	14	-	30809492-30809541	14qB	Mus musculus interleukin 17 receptor B (Il17rb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence ISS]	IL-17ER; Il17br; Evi27; IL17RH1; IL-17Rh1	IL-17ER; Il17br; Evi27; IL17RH1; IL-17Rh1
Mus musculus	RefSeq	ILMN_197698	ILMN_311580	LOC622994	XR_031862.1	XR_031862.1		622994	149257606	XR_031862.1	LOC622994		ILMN_1243314	003290164	S	560	CCCCACCCGGCCTGATAAAGCTCGAAGACTGGGGTACAAGGCTAAGCAAG	7	+	104743829-104743878	7qE2	PREDICTED: Mus musculus hypothetical LOC622994 (LOC622994), misc RNA.					
Mus musculus	RefSeq	ILMN_214941	ILMN_214941	OLFR1106	NM_146752.1	NM_146752.1		258747	22129344	NM_146752.1	Olfr1106	NP_666963.1	ILMN_1248699	006280082	S	771	CAGTTATATTCAACCAAGCTCTCAGTACTCCTTAGAACAAGAGAAGGTGG	2	-	86888571-86888620	2qD	Mus musculus olfactory receptor 1106 (Olfr1106), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC157528; MOR172-8_p; MOR172-6	MGC157528; MOR172-8_p; MOR172-6
Mus musculus	RefSeq	ILMN_191734	ILMN_234846	RP1L1	NM_146246.3	NM_146246.3		271209	125490371	NM_146246.3	Rp1l1	NP_666358.2	ILMN_1229492	000610270	S	6585	CGTGATCTCCCGTTGACCAGGGACCTGAGACAGCTTTGTGAAGTGATCAG	14	+	64652169-64652218	14qD1	Mus musculus retinitis pigmentosa 1 homolog (human)-like 1 (Rp1l1), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		Dcdc4; Rp1l1; BE983540; MGC38744; BC031365; Rp1hl1	Dcdc4; Rp1l1; BE983540; MGC38744; BC031365; Rp1hl1
Mus musculus	Riken	ILMN_202385	ILMN_202385	4930529I22RIK	ri|4930529I22|PX00034O05|AK015936|591					AK015936	4930529I22Rik		ILMN_2549211	005690253	S	249	AAGCAGCAGGTGCAGGGCCAAAACCCAACTCCAGTGACACACTTCCGCCA										
Mus musculus	RefSeq	ILMN_200344	ILMN_253292	EG384244	XM_001000706.1	XM_001000706.1		384244	94375519	XM_001000706.1	EG384244	XP_001000706.1	ILMN_1228735	002480056	S	750	CCCAGATCACGAGGCCCAGGCCAGCCCTACGACACACAGAGACATCAAAT				5qG2	PREDICTED: Mus musculus predicted gene, EG384244 (EG384244), mRNA.					
Mus musculus	RefSeq	ILMN_188508	ILMN_250433	POU2F1	NM_198933.2	NM_198933.2		18986	114431255	NM_198933.2	Pou2f1	NP_945151.2	ILMN_2663367	002480554	S	2350	GAGTGCAGAGCTGGGTTGCCACAGGCTTTCCTCACTACAGGGTGATAGGC	1	-	167805815-167805864	1qH2.3	Mus musculus POU domain, class 2, transcription factor 1 (Pou2f1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IGI]; The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity [goid 30910] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Otf-1; Otf1; 2810482H01Rik; Oct-1	Otf-1; Otf1; 2810482H01Rik; Oct-1
Mus musculus	RefSeq	ILMN_188508	ILMN_250433	POU2F1	NM_198933.2	NM_198933.2		18986	114431255	NM_198933.2	Pou2f1	NP_945151.2	ILMN_2609097	003360333	S	2549	TAAAACAATGTCTTTTCAGGATTGCTTCATGGATTGGAGAACTTTCTAAC	1	-	167805616-167805665	1qH2.3	Mus musculus POU domain, class 2, transcription factor 1 (Pou2f1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IGI]; The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity [goid 30910] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Otf-1; Otf1; 2810482H01Rik; Oct-1	Otf-1; Otf1; 2810482H01Rik; Oct-1
Mus musculus	MEEBO	ILMN_193908	ILMN_193908	SCL0002824.1_16	scl0002824.1_16						scl0002824.1_16		ILMN_2501549	006860367	S	2	AGGTAGCAGAGCGGGGACACCCATCATCCCCTGTGTGCCCTGATCTGTGG										
Mus musculus	RefSeq	ILMN_248315	ILMN_248315	COL9A1	NM_007740.2	NM_007740.2		12839	31982451	NM_007740.2	Col9a1	NP_031766.2	ILMN_2939882	007040373	S	2966	CAGAGTGTGGGGGGAGAAACGATACCAAAACTGGGGCAAAGCCTCAAAGG	1	+	24258745-24258794	1qA5	Mus musculus collagen, type IX, alpha 1 (Col9a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A homeostatic process involved in the maintenance of an internal equilibrium within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function [goid 1894] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Col9a-1	Col9a-1
Mus musculus	RefSeq	ILMN_186888	ILMN_248315	COL9A1	NM_007740.2	NM_007740.2		12839	31982451	NM_007740.2	Col9a1	NP_031766.2	ILMN_2706693	003370474	S	875	TCATTGTGACCCCCTGAGACCCAGGAGAGAAACCTGTCATGAGCTGCCAA	1	+	24201545-24201594	1qA5	Mus musculus collagen, type IX, alpha 1 (Col9a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A homeostatic process involved in the maintenance of an internal equilibrium within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function [goid 1894] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Col9a-1	Col9a-1
Mus musculus	RefSeq	ILMN_196981	ILMN_196981	LOC238199	XM_138115.1	XM_138115.1			20909705	XM_138115.1	LOC238199		ILMN_2526476	005570678	S	983	TGCTGCGTAGTAACCAGACCACCATAGAATTTGCACGAACATACCAGACC										
Mus musculus	RefSeq	ILMN_191871	ILMN_256495	PITPNM3	NM_001024927.2	NM_001024927.2		327958	126032351	NM_001024927.2	Pitpnm3	NP_001020098.1	ILMN_1212857	003800131	S	2871	TAGAAGCCAGCCACCGCTCTCGCCCCAAGAAGAACAACTCGCGCATGATC	11	-	71864775-71864824	11qB4	Mus musculus PITPNM family member 3 (Pitpnm3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	AI848332; A330068P14Rik; Gm880	AI848332; A330068P14Rik; Gm880
Mus musculus	RefSeq	ILMN_256495	ILMN_256495	PITPNM3	NM_001024927.2	NM_001024927.2		327958	126032351	NM_001024927.2	Pitpnm3	NP_001020098.1	ILMN_3112334	001340167	A	6324	AGGAGGGTGGCTAGTGAGAGACATTCCCCCTCAGACTCAGACCCACTGTC	11	-	71861322-71861371	11qB4	Mus musculus PITPNM family member 3 (Pitpnm3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	AI848332; A330068P14Rik; Gm880	AI848332; A330068P14Rik; Gm880
Mus musculus	RefSeq	ILMN_198989	ILMN_236085	LOC635524	XM_910606.3	XM_910606.3		635524	149260569	XM_910606.3	LOC635524	XP_915699.3	ILMN_1236857	000290537	S	1835	CTCGAGCACACCAGGAAAGAAGCAGAGCCATGATAGAGTTGGCCAGCCTT					PREDICTED: Mus musculus similar to chromosome 6 open reading frame 97 (LOC635524), mRNA.					
Mus musculus	RefSeq	ILMN_184335	ILMN_184335	TUBA3B	NM_009449.3	NM_009449.3		22147	114431226	NM_009449.3	Tuba3b	NP_033475.1	ILMN_2417813	002970630	S	1124	ACCATCAAGACCAAGCGCACCATCCAGTTTGTAGATTGGTGCCCGACTGG	6	+	145568327-145568376	6qG3	Mus musculus tubulin, alpha 3B (Tuba3b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Tuba7; M[a]7	Tuba7; M[a]7
Mus musculus	RefSeq	ILMN_219236	ILMN_219236	RBM42	NM_133693.1	NM_133693.1		68035	19526863	NM_133693.1	Rbm42	NP_598454.1	ILMN_2706022	002190528	S	1422	TGGGCTCACGCCCCATCAAGCTTCGCAAAAGCATGTGGAAGGACCGGAAC	7	-	31426180-31426229	7qB1	Mus musculus RNA binding motif protein 42 (Rbm42), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	1700003D06Rik	1700003D06Rik
Mus musculus	RefSeq	ILMN_219236	ILMN_219236	RBM42	NM_133693.1	NM_133693.1		68035	19526863	NM_133693.1	Rbm42	NP_598454.1	ILMN_2709456	001940128	S	1255	GGTGAACGATGACATCTTGGCACGAGCCTTCAGCCGCTTCCCATCCTTCC	7	-	31426434-31426483	7qB1	Mus musculus RNA binding motif protein 42 (Rbm42), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	1700003D06Rik	1700003D06Rik
Mus musculus	Riken	ILMN_203701	ILMN_203701	VTI1-PENDING	ri|9630015E17|PX00115F24|AK035895|2922					AK035895	Vti1-pending		ILMN_1245575	005720670	S	2817	GAACCAGCGAAAGGCGAAAAATACTGAGCCGAGGGTTGTTGGGTCCCCCC										
Mus musculus	Riken	ILMN_202620	ILMN_202620	B230207L18RIK	ri|B230207L18|PX00069C21|AK020995|1087					AK020995	B230207L18Rik		ILMN_1234850	003460228	S	466	CATTTGTTAAACTCGACAACATCAAAGAGACACCTGCCTGCCTCGGCTGG										
Mus musculus	RefSeq	ILMN_219830	ILMN_219830	CCDC7	NM_029061.2	NM_029061.2		74703	141803055	NM_029061.2	Ccdc7	NP_083337.1	ILMN_1254168	005220253	S	1281	GTTAATAATGGAGAAAACCCTGCTGGAAGCAGAAATACGAAGGCTGAGAG	8	-	131508862-131508911	8qE2	Mus musculus coiled-coil domain containing 7 (Ccdc7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930540C21Rik; 4930517G15Rik	4930540C21Rik; 4930517G15Rik
Mus musculus	MEEBO	ILMN_188513	ILMN_188513	IGHV14S3_X03573$M12991X03573_IG_HEAVY_VARIABLE_14S3_203	IGHV14S3_X03573$M12991X03573_Ig_heavy_variable_14S3_203						IGHV14S3_X03573$M12991X03573_Ig_heavy_variable_14S3_203		ILMN_2453303	002760168	S	3	GGATTGATCCTGAGAATGGTGATACTGAATATGCCCCGAAGTTCCAGGGC										
Mus musculus	RefSeq	ILMN_217353	ILMN_217353	GMFG	NM_022024.2	NM_022024.2		63986	85861214	NM_022024.2	Gmfg	NP_071307.1	ILMN_1222471	007050450	S	333	GTCTACAGCTACAAGTACGTGCATGATGACGGCAGGGTGTCCTATCCTTT	7	+	29229879-29229928	7qA3	Mus musculus glia maturation factor, gamma (Gmfg), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AI324845; 0610039G16Rik; 2310057N07Rik	AI324845; 0610039G16Rik; 2310057N07Rik
Mus musculus	RefSeq	ILMN_217353	ILMN_217353	GMFG	NM_022024.2	NM_022024.2		63986	85861214	NM_022024.2	Gmfg	NP_071307.1	ILMN_1227907	001070091	S	330	GTGGTCTACAGCTACAAGTACGTGCATGATGACGGCAGGGTGTCCTATCC	7	+	29229876-29229925	7qA3	Mus musculus glia maturation factor, gamma (Gmfg), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AI324845; 0610039G16Rik; 2310057N07Rik	AI324845; 0610039G16Rik; 2310057N07Rik
Mus musculus	RefSeq	ILMN_186319	ILMN_186319	TYMS	NM_021288.3	NM_021288.3		22171	142347432	NM_021288.3	Tyms	NP_067263.1	ILMN_2441895	003130435	S	1787	AGGAGGAGCCCTCACAGTCACTTAAGCACCCCACACAGCACATCAAGGAG	5	-	30386657-30386706	5qB1	Mus musculus thymidylate synthase (Tyms), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate) [goid 6231] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = dihydrofolate + dTMP [goid 4799] [evidence IEA]	TS	TS
Mus musculus	RefSeq	ILMN_186319	ILMN_186319	TYMS	NM_021288.3	NM_021288.3		22171	142347432	NM_021288.3	Tyms	NP_067263.1	ILMN_1247173	004810239	S	313	AGAATTGTCCTCAAAGGGAGTGAGAATCTGGGATGCCAATGGATCCCGAG	5	-	30395113-30395162	5qB1	Mus musculus thymidylate synthase (Tyms), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate) [goid 6231] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = dihydrofolate + dTMP [goid 4799] [evidence IEA]	TS	TS
Mus musculus	RefSeq	ILMN_186319	ILMN_186319	TYMS	NM_021288.3	NM_021288.3		22171	142347432	NM_021288.3	Tyms	NP_067263.1	ILMN_2484707	002100026	S	231	CTCTGCTCACAACCAAACGAGTGTTCTGGAAGGGTGTTTTGGAGGAGTTG	5	-	30398188-30398237	5qB1	Mus musculus thymidylate synthase (Tyms), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate) [goid 6231] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = dihydrofolate + dTMP [goid 4799] [evidence IEA]	TS	TS
Mus musculus	RefSeq	ILMN_186319	ILMN_186319	TYMS	NM_021288.3	NM_021288.3		22171	142347432	NM_021288.3	Tyms	NP_067263.1	ILMN_2434519	000510544	S	2879	CTCCCCCTTTCTTTTTATATTCAGGAGTGCTCTAAACACAACGATTTACT	5	-	30385565-30385614	5qB1	Mus musculus thymidylate synthase (Tyms), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate) [goid 6231] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = dihydrofolate + dTMP [goid 4799] [evidence IEA]	TS	TS
Mus musculus	RefSeq	ILMN_220519	ILMN_220519	CD96	NM_032465.1	NM_032465.1		84544	14209685	NM_032465.1	Cd96	NP_115854.1	ILMN_1249991	000070717	S	1749	CCTCCCATCAAGTACACGTATATTCAAGAACCCATTGGATGCGACCTGTG	16	-	46036013-46036062	16qB5	Mus musculus CD96 antigen (Cd96), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700109I12Rik; Tactile	1700109I12Rik; Tactile
Mus musculus	Riken	ILMN_206985	ILMN_206985	4933414I19RIK	ri|4933414I19|PX00642K09|AK077156|1325					AK077156	4933414I19Rik		ILMN_2584173	001240402	S	993	ACGGACTTGCCTTTGTGGGCCTCACCTCTAAACCGAGGAAGCAAGACCCC										
Mus musculus	Riken	ILMN_207123	ILMN_207123	ITGAX	ri|F630002M04|PL00001C17|AK089167|1210					AK089167	Itgax		ILMN_1222345	006840025	S	1023	GCTGCCTTAGATATATGGAACCAGGGGAGGCTCCTTCAGCCTGGGAACCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216428	ILMN_216428	PKHD1	NM_153179.3	NM_153179.3		241035	126157465	NM_153179.3	Pkhd1	NP_694819.2	ILMN_2671001	004860333	S	11898	AATCCCAGGCTAAGGAACAAAAGAAGAATACCCATAATTCCTCCAAACCC	1	-	20060507-20060556	1qA3-qA4	Mus musculus polycystic kidney and hepatic disease 1 (Pkhd1), mRNA.		The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence IMP]		AI118496; Tigm1; AI182499; FPC	AI118496; Tigm1; AI182499; FPC
Mus musculus	RefSeq	ILMN_216428	ILMN_216428	PKHD1	NM_153179.3	NM_153179.3		241035	126157465	NM_153179.3	Pkhd1	NP_694819.2	ILMN_1223914	003450138	S	12833	CTGCAGTGCTATAGAAATACCCAGGAGATATTTTACACCAACGTTTACCC	1	-	20047905-20047954	1qA3-qA4	Mus musculus polycystic kidney and hepatic disease 1 (Pkhd1), mRNA.		The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence IMP]		AI118496; Tigm1; AI182499; FPC	AI118496; Tigm1; AI182499; FPC
Mus musculus	RefSeq	ILMN_196439	ILMN_196439	3200001I04RIK	XM_127898.4	XM_127898.4			38076678	XM_127898.4	3200001I04Rik		ILMN_2524189	007320259	S	2001	CTGTGACTCTTCCTACTGGCACAATGGGCCTTACAATGCAGATGGGTCCC										
Mus musculus	RefSeq	ILMN_209146	ILMN_209146	TMEM63B	NM_198167.2	NM_198167.2		224807	142376394	NM_198167.2	Tmem63b	NP_937810.1	ILMN_1220629	000380753	S	758	GTCAAGCGGACTCTTTTCATCAATGGAATCTCCAAATATGCAGAGTCGGA	17	-	45810129-45810178	17qB3	Mus musculus transmembrane protein 63b (Tmem63b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BC026370	BC026370
Mus musculus	RefSeq	ILMN_209146	ILMN_209146	TMEM63B	NM_198167.2	NM_198167.2		224807	142376394	NM_198167.2	Tmem63b	NP_937810.1	ILMN_1256171	006590646	S	2474	CCTGATGGCCTCACGGACACAGACTTCCAGTCATGCGAGGACAGCCTCAT	17	-	45797759-45797808	17qB3	Mus musculus transmembrane protein 63b (Tmem63b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BC026370	BC026370
Mus musculus	RefSeq	ILMN_223232	ILMN_223232	HSPB8	NM_030704.1	NM_030704.1		80888	13507645	NM_030704.1	Hspb8	NP_109629.1	ILMN_2761205	000460594	S	1713	GGGAGGATGTGTGTGTCTTTGTTGTGTGAATTGTGCTGTTGTTTAGAGGG	5	-	116669543-116669592	5qF	Mus musculus heat shock protein 8 (Hspb8), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	HSP20-like; E2IG1; H11; AW413033; D5Ucla4; AU018630; Cryac; HSP22; H11K	HSP20-like; E2IG1; H11; AW413033; D5Ucla4; AU018630; Cryac; HSP22; H11K
Mus musculus	RefSeq	ILMN_223232	ILMN_223232	HSPB8	NM_030704.1	NM_030704.1		80888	13507645	NM_030704.1	Hspb8	NP_109629.1	ILMN_2944366	006280209	S	1505	GCATGACCCCATGGCTCTCAAACCATCACCACCAAGAACTCTGGGAGCCC	5	-	116669751-116669800	5qF	Mus musculus heat shock protein 8 (Hspb8), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	HSP20-like; E2IG1; H11; AW413033; D5Ucla4; AU018630; Cryac; HSP22; H11K	HSP20-like; E2IG1; H11; AW413033; D5Ucla4; AU018630; Cryac; HSP22; H11K
Mus musculus	RefSeq	ILMN_212973	ILMN_212973	TBX3	NM_011535.2	NM_011535.2		21386	37622346	NM_011535.2	Tbx3	NP_035665.2	ILMN_3061990	000990487	I	2013	CTTCCCAAGCGATCACGCAACGTGGCAGGGGAATTATAGTTTTGGGACCC	5	+	120125260-120125309	5qF	Mus musculus T-box 3 (Tbx3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence ISO]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence ISO]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The progression of the limbic system over time from its initial formation until its mature state. The limbic system is a collection of structures in the brain involved in emotion, motivation and emotional aspects of memory [goid 21761] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	D5Ertd189e	D5Ertd189e
Mus musculus	RefSeq	ILMN_212973	ILMN_212973	TBX3	NM_011535.2	NM_011535.2		21386	37622346	NM_011535.2	Tbx3	NP_035665.2	ILMN_3139514	002970687	A	4633	GGTCTTATTTCCAGGTCAGGAGATGGCTAATCCACACTAGCAAGCCTAGG	5	+	120134161-120134210	5qF	Mus musculus T-box 3 (Tbx3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence ISO]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence ISO]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The progression of the limbic system over time from its initial formation until its mature state. The limbic system is a collection of structures in the brain involved in emotion, motivation and emotional aspects of memory [goid 21761] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	D5Ertd189e	D5Ertd189e
Mus musculus	RefSeq	ILMN_209782	ILMN_209782	PRPF38A	NM_172697.1	NM_172697.1		230596	27370013	NM_172697.1	Prpf38a	NP_766285.1	ILMN_2978570	002370685	S	1395	GGCCTAACCCACTATGGTTATTCATACTTAGCAGGGTCAAGAAGACCTGG	4	-	108062864-108062913	4qC7	Mus musculus PRP38 pre-mRNA processing factor 38 (yeast) domain containing A (Prpf38a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		2410002M20Rik	2410002M20Rik
Mus musculus	RefSeq	ILMN_209782	ILMN_209782	PRPF38A	NM_172697.1	NM_172697.1		230596	27370013	NM_172697.1	Prpf38a	NP_766285.1	ILMN_2978574	006110079	S	1093	CTCAAAGTCTCCTGAAAGGTCTAAGAAAAGCCACAAGAAGAGCCGGAGGG	4	-	108063166-108063199:108064837-108064852	4qC7	Mus musculus PRP38 pre-mRNA processing factor 38 (yeast) domain containing A (Prpf38a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		2410002M20Rik	2410002M20Rik
Mus musculus	RefSeq	ILMN_199102	ILMN_258660	LOC626940	XR_004891.1	XR_004891.1		626940	94388804	XR_004891.1	LOC626940		ILMN_1227507	003940273	S	1306	CCACGGCAACGTCTTCCTCAGGTGGCAGGCTTGTTTCATCTTCCAAAAGG				10qC1	PREDICTED: Mus musculus similar to MAP/microtubule affinity-regulating kinase 3 (LOC626940), mRNA.					
Mus musculus	RefSeq	ILMN_219397	ILMN_219397	MTCH1	NM_019880.3	NM_019880.3		56462	118130562	NM_019880.3	Mtch1	NP_063933.1	ILMN_1239041	002650538	S	1834	CAGGTTACATAGGCCGACATCTAGTCCTCCCCTCGTGGTAAGATAGACCC	17	-	29469055-29469104	17qA3.3	Mus musculus mitochondrial carrier homolog 1 (C. elegans) (Mtch1), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU018396; C77849; AI255158; 2310034O17Rik; PSAP	AU018396; C77849; AI255158; 2310034O17Rik; PSAP
Mus musculus	RefSeq	ILMN_219397	ILMN_219397	MTCH1	NM_019880.3	NM_019880.3		56462	118130562	NM_019880.3	Mtch1	NP_063933.1	ILMN_2708297	003390066	S	472	ACCAATGTGCTGGGGAGGAAGGTCCTCTACCTGCCGAGCTTCTTCACCTA	17	-	29479769-29479818	17qA3.3	Mus musculus mitochondrial carrier homolog 1 (C. elegans) (Mtch1), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU018396; C77849; AI255158; 2310034O17Rik; PSAP	AU018396; C77849; AI255158; 2310034O17Rik; PSAP
Mus musculus	MEEBO	ILMN_218873	ILMN_218873	OLFR172	scl00259003.1_237				22128934	NM_147001	Olfr172		ILMN_2726345	004780647	S	569	TGACCCCTATGTCAATGAGCTTGTATTGCTTGTCTTTTCAGCCCCAATCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	Riken	ILMN_206693	ILMN_206693	C130072C03RIK	ri|C130072C03|PX00171C04|AK081726|1896					AK081726	C130072C03Rik		ILMN_1233936	005050746	S	1552	CTCAGTCTCCACTAATCTGGGCGTGGATGTACAGTCTTTGCTCACCTAGG										
Mus musculus	RefSeq	ILMN_240203	ILMN_240203	4930596D02RIK	NM_001033766.1	NM_001033766.1		239036	85702072	NM_001033766.1	4930596D02Rik	NP_001028938.1	ILMN_2799163	006550403	S	811	CCAGCACACCTGATAGCTGCTGTGGAACCTGTGTCTCAGCATGTCTGTAG	14	-	34639276-34639325	14qB	Mus musculus RIKEN cDNA 4930596D02 gene (4930596D02Rik), mRNA.					
Mus musculus	MEEBO	ILMN_224194	ILMN_224194	OFCC1	scl44064.6.1_105				26024316	NM_172143	Ofcc1		ILMN_2776329	006960576	S	800	GGCGGTTAAGATGAACAAGTCCTGCAATGAATGCCAGAATGCTAAGACTC										
Mus musculus	RefSeq	ILMN_224101	ILMN_233023	SKINT3	NM_177578.4	NM_177578.4		195564	146198750	NM_177578.4	Skint3	NP_808246.1	ILMN_1250350	000020280	S	3239	TCCCCAGATCTATATTCATGTCAGAGTCAATAATCATCAATATCTGGAAC				4qD1	Mus musculus selection and upkeep of intraepithelial T cells 3 (Skint3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-29D6.1	RP23-29D6.1
Mus musculus	MEEBO	ILMN_184816	ILMN_184816	ZFP180	scl00210135.1_76	NM_172483.1			27369653	NM_172483.1	Zfp180		ILMN_2433699	002710673	S	2	CTACAGGAACCTGAGAAAATGTTTATGTATAGCCTGAAGTTGAAAAGGGA								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184816	ILMN_184816	ZFP180	scl00210135.1_76	NM_172483.1			27369653	NM_172483.1	Zfp180		ILMN_2421813	005290170	S	3	CAGTTGACTGGTGGGTGTGTTGTGGTGACTCATCTTAGACCTTCCACTGG								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188067	ILMN_188067	4921513J16RIK	scl0353207.6_330						4921513J16Rik		ILMN_2449534	002490136	S	9	ACCTGGCTGGGGGGATGAATCTTCGAGAGACACCATCCTGGCGAGTTTCA										
Mus musculus	RefSeq	ILMN_200832	ILMN_315197	EG667736	NM_001099310.1	NM_001099310.1		667736	150010640	NM_001099310.1	EG667736	NP_001092780.1	ILMN_1236412	003120386	S	524	GGGACAAAACCCATTGCCTTGGACCACATCATTATAGACTGCAAAGTGGG				XqB	Mus musculus predicted gene, EG667736 (EG667736), mRNA.					
Mus musculus	RefSeq	ILMN_219402	ILMN_219402	RFX1	NM_009055.3	NM_009055.3		19724	142361730	NM_009055.3	Rfx1	NP_033081.2	ILMN_2708347	005720424	S	3533	CCACCGTCAGCAGCAGTACCCCACTGCTCCCCTTTCTTGGTATTAAGTGC	8	+	86620282-86620331	8qC3	Mus musculus regulatory factor X, 1 (influences HLA class II expression) (Rfx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AI385641; AI047719	AI385641; AI047719
Mus musculus	MEEBO	ILMN_192763	ILMN_192763	XPOT	scl073192.7_102	XM_125902.4			38090789	XM_125902.4	Xpot		ILMN_2491099	001940082	S	6	GAAGCAGATGCTGAGGAGGAGTTACTTCGCCTTCCTGCAGACGGTCACCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_206222	ILMN_206222	C920016N10RIK	ri|C920016N10|PX00178E07|AK083355|2483					AK083355	C920016N10Rik		ILMN_1252514	003170706	S	2116	GCGCTGAGCGGGCCGTTATCGGTAAGCCCGTGTTCTCGTATCTCTTGTAT										
Mus musculus	RefSeq	ILMN_227591	ILMN_227591	TNN	NM_177839.2	NM_177839.2		329278	31342877	NM_177839.2	Tnn	NP_808507.1	ILMN_2896200	004180626	S	5230	TGGGTGTCAGAGCTGAGGCGACCTGCTACTTCTTGTCTCTCCTGGACCTC	1	-	162015659-162015708	1qH2.1	Mus musculus tenascin N (Tnn), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IDA]	Interacting selectively with an integrin [goid 5178] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	Tnw; tenascin-W	Tnw; tenascin-W
Mus musculus	RefSeq	ILMN_215440	ILMN_215440	FTL1	NM_010240.2	NM_010240.2		14325	114326465	NM_010240.2	Ftl1	NP_034370.2	ILMN_2816707	000580598	S	1	CCGGAGGGTCAACATGCTATAAAAGGAGCGCTCCTTGCCCGGGACTTAGA	7	-	52715206-52715255	7qB4	Mus musculus ferritin light chain 1 (Ftl1), mRNA.		The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC102130; Ftl-1; MGC102131; Ftl; MGC118080; MGC118079	MGC102130; Ftl-1; MGC102131; Ftl; MGC118080; MGC118079
Mus musculus	RefSeq	ILMN_216107	ILMN_216107	HDLBP	NM_133808.4	NM_133808.4		110611	146149319	NM_133808.4	Hdlbp	NP_598569.1	ILMN_2667447	006180187	S	6153	GAGATTATATGCAAACATGTGTAAAGGCTCATGAATATGGATGACACTGG				1qD	Mus musculus high density lipoprotein (HDL) binding protein (Hdlbp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	1110005P14Rik; D1Ertd101e; AA960365; AI118566	1110005P14Rik; D1Ertd101e; AA960365; AI118566
Mus musculus	RefSeq	ILMN_216107	ILMN_216107	HDLBP	NM_133808.4	NM_133808.4		110611	146149319	NM_133808.4	Hdlbp	NP_598569.1	ILMN_2709681	004070037	S	31	GTTCCTGTTTCGCCACAGTTCCTACCTTATGAGCTTGGATTCCTCACGCT				1qD	Mus musculus high density lipoprotein (HDL) binding protein (Hdlbp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	1110005P14Rik; D1Ertd101e; AA960365; AI118566	1110005P14Rik; D1Ertd101e; AA960365; AI118566
Mus musculus	MEEBO	ILMN_184542	ILMN_184542	9629553_2023_RC	9629553_2023_rc						9629553_2023_rc		ILMN_2419515	002570619	S	5	CACATCCTGGGAAAAAATCCAGCACCTTGATGTGTGCCACATGCTTCAAC										
Mus musculus	Riken	ILMN_205672	ILMN_205672	C230021J06RIK	ri|C230021J06|PX00174E09|AK048720|2150					AK048720	C230021J06Rik		ILMN_1219437	002350494	S	1988	TCTGTCTGGCTCACTAGACTGTGATCAGTACTAAGTAGTCCGTGGCACAC										
Mus musculus	RefSeq	ILMN_210491	ILMN_210491	PDLIM4	NM_019417.2	NM_019417.2		30794	142347858	NM_019417.2	Pdlim4	NP_062290.1	ILMN_2606162	002940615	S	972	GCCGGAGGGATATGATGTGGTGGCTGTATACCCCAATGCTAAGGTGGAAC	11	-	53868544-53868593	11qB1.3	Mus musculus PDZ and LIM domain 4 (Pdlim4), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ril	Ril
Mus musculus	RefSeq	ILMN_208986	ILMN_208986	PSMA6	NM_011968.2	NM_011968.2		26443	142364079	NM_011968.2	Psma6	NP_036098.1	ILMN_1224538	002680082	S	553	GAGTCAACCAGCTTCCTTGAAAAGAAAGTGAAGAAGAAATTTGATTGGAC	12	+	56513298-56513347	12qC1	Mus musculus proteasome (prosome, macropain) subunit, alpha type 6 (Psma6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	IOTA	IOTA
Mus musculus	Riken	ILMN_206440	ILMN_206440	C230066I17RIK	ri|C230066I17|PX00175L19|AK082586|3881					AK082586	C230066I17Rik		ILMN_1256532	001990349	S	3610	AAAACCCAGTGACCAGGAAGAGCTTTCAGTGGCCTGAGCAGGATGCTAAG										
Mus musculus	RefSeq	ILMN_199857	ILMN_199857	LOC383090	XM_356864.1	XM_356864.1			38078254	XM_356864.1	LOC383090		ILMN_1237880	003360433	S	2042	TCAGGGCTGCGTCTCACCACAGGGTGCCTGAAATCAGTTGTTCACCAGCT										
Mus musculus	RefSeq	ILMN_198917	ILMN_198917	LOC235033	XM_134689.4	XM_134689.4			38089732	XM_134689.4	LOC235033		ILMN_2533387	005860136	S	1316	AAGTTCAGCCGATGCTGGAGACAGGCCCACACTTGGTTCTGCATTGCTGC										
Mus musculus	RefSeq	ILMN_243252	ILMN_243252	PDE1A	NM_001009979.1	NM_001009979.1		18573	58036492	NM_001009979.1	Pde1a	NP_001009979.1	ILMN_3146952	001820341	A	1352	GGTGGACATCATTCAGCAGAACAAAGAGAGGTGGAAAGAGTTGGCTGCCC	2	-	79705197-79705246	2qC3	Mus musculus phosphodiesterase 1A, calmodulin-dependent (Pde1a), transcript variant 9, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]	MGC116577; AW125737; AI987702	MGC116577; AW125737; AI987702
Mus musculus	RefSeq	ILMN_213565	ILMN_213565	CDKN1B	NM_009875.2	NM_009875.2		12576	31542371	NM_009875.2	Cdkn1b	NP_034005.2	ILMN_2923960	004880053	S	2809	TCTCACCCTCTTTGACCCAGATTTTATAGAGCGAGTTTCTCAACCTCTGC	6	+	134889479-134889528	6qG1	Mus musculus cyclin-dependent kinase inhibitor 1B (Cdkn1b), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of microtubule polymerization [goid 31116] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IGI]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IDA]	AI843786; p27; AA408329; Kip1; p27Kip1	AI843786; p27; AA408329; Kip1; p27Kip1
Mus musculus	MEEBO	ILMN_192536	ILMN_192536	2010005O13RIK	scl16010.9_219				31541854	NM_145512	2010005O13Rik		ILMN_2488997	005490524	S	9	TCGTTTTCCTCCCTTCATAGAGAAAGAGTGTTGCTGGGGAGAGCTACCTC										
Mus musculus	RefSeq	ILMN_222362	ILMN_222362	JOSD1	NM_028792.2	NM_028792.2		74158	142362386	NM_028792.2	Josd1	NP_083068.1	ILMN_1227824	002000274	S	3108	CAGGGCTGGTTCTGTTCATATCCAATTCTGGTGCTTAGGAACAGGGACCC	15	-	79504863-79504912	15qE1	Mus musculus Josephin domain containing 1 (Josd1), mRNA.				1300006C06Rik; MGC101975; mKIAA0063; MGC6306	1300006C06Rik; MGC101975; mKIAA0063; MGC6306
Mus musculus	RefSeq	ILMN_221406	ILMN_221406	SPRR2B	NM_011469.3	NM_011469.3		20756	128485450	NM_011469.3	Sprr2b	NP_035599.2	ILMN_1248780	001410408	S	367	CCAGTCATCAGGACTGGGAAGTAAGAGAAATCTGTCTCACTGGCTCACCA	3	+	92121675-92121724	3qF1	Mus musculus small proline-rich protein 2B (Sprr2b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223599	ILMN_223599	5330414O08RIK	scl32313.5_285	NM_183270.1			34304059	NM_183270.1	5330414O08Rik		ILMN_1218282	000110196	S	1139	CACAGAGCTAGTTTGGCAGTACTGACAGTGCCTTCTCTCAGTGTGTTGTG										
Mus musculus	RefSeq	ILMN_243669	ILMN_243669	DLX1AS	NR_002854.1	NR_002854.1		111970	84872147	NR_002854.1	Dlx1as		ILMN_2924781	002970240	S	47	GGGACCTCTTTCCTCCACTCTGTTCTCAGCATAGGAAGATGGGGCTGGGG	2	-	71375849-71375898	2qC2	Mus musculus distal-less homeobox 1, antisense (Dlx1as), non-coding RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_203611	ILMN_203611	ZAP3-PENDING	ri|A930013E17|PX00066O08|AK044440|3199					AK044440	Zap3-pending		ILMN_1252941	004860020	S	2963	GAGGCAGAAGAACTTACTGAATGAAGAGCCAAAGGGCTGTCACTGGCTGC										
Mus musculus	Riken	ILMN_207399	ILMN_207399	G430005B15RIK	ri|G430005B15|PH00001A12|AK089927|3470					AK089927	G430005B15Rik		ILMN_1226182	006040709	S	3415	CTTCATGATGCTACGTTCTGCGAGCGGCCAATGTATTGACGCACTGAAAC										
Mus musculus	RefSeq	ILMN_200899	ILMN_200899	LOC385455	XM_358239.1	XM_358239.1			38086911	XM_358239.1	LOC385455		ILMN_2540392	004230463	S	674	CCCGTGTCTTGGCCTATGCTCGAAGGGAGAGCATCAAACAGAGCATGCGC										
Mus musculus	RefSeq	ILMN_248388	ILMN_248388	EG240916	NM_177723.2	NM_177723.2		240916	31343207	NM_177723.2	EG240916	NP_808391.1	ILMN_2824741	006940484	S	1642	TGTCGGTATCCCAGAACCGCAGAGGTACAACCCAGATGTCCCCAGCCAAG	1	+	174400233-174400282	1qH3	Mus musculus predicted gene, EG240916 (EG240916), mRNA.				A030011M19	A030011M19
Mus musculus	RefSeq	ILMN_226905	ILMN_226905	RILP	NM_001029938.1	NM_001029938.1		280408	71480153	NM_001029938.1	Rilp	NP_001025109.1	ILMN_2975382	006350066	S	1081	TCCAGCAGCCTACAGAAAGGAGAAGAGACCCCACAGCAACCCCACCTGCA	11	+	75321258-75321307	11qB5	Mus musculus Rab interacting lysosomal protein (Rilp), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		RP23-384C18.10; Gm857; AI835553	RP23-384C18.10; Gm857; AI835553
Mus musculus	RefSeq	ILMN_199155	ILMN_226905	RILP	NM_001029938.1	NM_001029938.1		280408	71480153	NM_001029938.1	Rilp	NP_001025109.1	ILMN_1218228	004250601	S	1275	GTGGCTCCCCACTTAAACCTCGCCTGTACTAGCTATGGTGGAACGTCAGC	11	+	75321452-75321501	11qB5	Mus musculus Rab interacting lysosomal protein (Rilp), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		RP23-384C18.10; Gm857; AI835553	RP23-384C18.10; Gm857; AI835553
Mus musculus	RefSeq	ILMN_189083	ILMN_189083	UPP2	NM_029692.2	NM_029692.2		76654	133892991	NM_029692.2	Upp2	NP_083968.1	ILMN_2517656	002070372	S	1460	GCTTGCTGAAGCAGATCCAGAAGTGTATGTTAGGATGGTGTCAGCACTTC	2	+	58642912-58642961	2qC1.1	Mus musculus uridine phosphorylase 2 (Upp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: uridine + phosphate = uracil + alpha-D-ribose 1-phosphate [goid 4850] [evidence ISS]	UPASE2; UDRPASE2; 1700124F02Rik; UP2; AI266885	UPASE2; UDRPASE2; 1700124F02Rik; UP2; AI266885
Mus musculus	RefSeq	ILMN_189083	ILMN_189083	UPP2	NM_029692.2	NM_029692.2		76654	133892991	NM_029692.2	Upp2	NP_083968.1	ILMN_2458185	001410170	S	847	GTCGCCTAGATGGGGCGTTATGCTCCTTTTCGAGAGAGAAAAAGCTAGAC	2	+	58632419-58632468	2qC1.1	Mus musculus uridine phosphorylase 2 (Upp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: uridine + phosphate = uracil + alpha-D-ribose 1-phosphate [goid 4850] [evidence ISS]	UPASE2; UDRPASE2; 1700124F02Rik; UP2; AI266885	UPASE2; UDRPASE2; 1700124F02Rik; UP2; AI266885
Mus musculus	RefSeq	ILMN_189083	ILMN_189083	UPP2	NM_029692.2	NM_029692.2		76654	133892991	NM_029692.2	Upp2	NP_083968.1	ILMN_2462988	003520382	S	1190	GGAGCCATGTGTTGTTCATAACATTCTTATGTAATTCCCATCCTTGGGCT	2	+	58642642-58642691	2qC1.1	Mus musculus uridine phosphorylase 2 (Upp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: uridine + phosphate = uracil + alpha-D-ribose 1-phosphate [goid 4850] [evidence ISS]	UPASE2; UDRPASE2; 1700124F02Rik; UP2; AI266885	UPASE2; UDRPASE2; 1700124F02Rik; UP2; AI266885
Mus musculus	RefSeq	ILMN_185324	ILMN_241686	D3ERTD300E	NM_019995.3	NM_019995.3		56790	146134966	NM_019995.3	D3Ertd300e	NP_064379.1	ILMN_1219063	006130598	S	1631	AGCAGGCCAGCAGCTTCCTTAAATCTCCAACTCCTCCTCCATCGTGTAAG				3qC	Mus musculus DNA segment, Chr 3, ERATO Doi 300, expressed (D3Ertd300e), mRNA.		A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		p38IP; AA667204	p38IP; AA667204
Mus musculus	RefSeq	ILMN_222026	ILMN_222026	ZMAT1	NM_175446.3	NM_175446.3		215693	111185886	NM_175446.3	Zmat1	NP_780655.2	ILMN_2743593	003870653	S	1802	GACTATGACATTTACAAGCATCTGCCCTCAAATGACAATGCCAGTGCCCA	X	-	131507563-131507612	XqE3	Mus musculus zinc finger, matrin type 1 (Zmat1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AW990744; ZMAT1; A230096A06; B930008K04Rik	AW990744; ZMAT1; A230096A06; B930008K04Rik
Mus musculus	RefSeq	ILMN_232261	ILMN_232261	PIGK	NM_178016.2	NM_178016.2		329777	87116687	NM_178016.2	Pigk	NP_821135.1	ILMN_3120797	004280739	A	4499	CCAGGTCCAGGGCTCTGAATTTGTCCATCCCCAAAATCCATACCATCTGC	3	+	152451611-152451660	3qH3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class K (Pigk), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	3000001O05Rik	3000001O05Rik
Mus musculus	RefSeq	ILMN_200570	ILMN_200570	LARS	XM_357008.1	XM_357008.1			38083832	XM_357008.1	Lars		ILMN_1241416	006380451	S	570	TGCACTAGCCTTTGCAGCCCCTGGATGTGAGCTGAACAAGGTGTCTGTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6429] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-leucine + tRNA(Leu) = AMP + diphosphate + L-leucyl-tRNA(Leu) [goid 4823] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196843	ILMN_196843	LOC245049	XM_147121.1	XM_147121.1			20896763	XM_147121.1	LOC245049		ILMN_1245691	006110543	S	2777	GTACCGGTGACACCAAGGACTTGATGTGCCTTGACCCAACAGCCATCGAG										
Mus musculus	RefSeq	ILMN_190038	ILMN_250923	ADRA1B	NM_007416.3	NM_007416.3		11548	141803355	NM_007416.3	Adra1b	NP_031442.2	ILMN_2466647	007570241	S	2719	AGGTACACAAGTATCCTACACTGAACCAGAATTATCTCAGCCAAGTCCTG	11	-	43588386-43588435	11qB1.1	Mus musculus adrenergic receptor, alpha 1b (Adra1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen [goid 45818] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen [goid 45819] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; A process that is triggered by vasomotor excitation and results in a decrease in the diameter of an artery during the baroreceptor response to decreased blood pressure [goid 1987] [evidence IMP]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IGI]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IGI]	 [goid 4937] [evidence IMP];  [goid 4937] [evidence IGI];  [goid 4937] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4935] [evidence IEA]	[a]1b	[a]1b
Mus musculus	RefSeq	ILMN_197910	ILMN_197910	LOC213948	XM_149596.3	XM_149596.3			38079557	XM_149596.3	LOC213948		ILMN_2529797	004490328	S	1900	AGCTCTAAGTTCCTTGGACACCTTCGGGGCCGGGTACAACAAGATGCAGC										
Mus musculus	RefSeq	ILMN_197641	ILMN_252124	EG668831	XM_982491.2	XM_982491.2		668831	149251876	XM_982491.2	EG668831	XP_987585.1	ILMN_1255324	001190195	S	678	AGGTGGACAGGAAAGCGTCTAGCAACCCTGACCTTCATCTCAACAGGGCG				3qG3	PREDICTED: Mus musculus predicted gene, EG668831 (EG668831), mRNA.					
Mus musculus	RefSeq	ILMN_197887	ILMN_259625	LOC676606	XR_004941.1	XR_004941.1		676606	94372065	XR_004941.1	LOC676606		ILMN_1225200	000450102	S	2221	AAAAGAGCCCGAGGAAGGAGACAACGACAGAGAGAGCGCCAATGGAGAGG					PREDICTED: Mus musculus similar to Heterogeneous nuclear ribonucleoprotein C (C1/C2) (LOC676606), misc RNA.					
Mus musculus	RefSeq	ILMN_216094	ILMN_216094	DNAJB13	NM_153527.2	NM_153527.2		69387	29648321	NM_153527.2	Dnajb13	NP_705755.2	ILMN_2667257	003940348	S	1051	GGCCTTGCCTGCTCCTATCCACTCAACTCCCACAGCCTATGAAGATGGGG	7	-	107651571-107651620	7qE3	Mus musculus DnaJ (Hsp40) related, subfamily B, member 13 (Dnajb13), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	Tsarg; 1700014P03Rik	Tsarg; 1700014P03Rik
Mus musculus	RefSeq	ILMN_220195	ILMN_220195	DENND1B	NM_183217.2	NM_183217.2		329260	118130741	NM_183217.2	Dennd1b	NP_899040.1	ILMN_2718929	005310008	S	1179	CGCAGGGCCTAGGAGGGAATCCTATAATAGTTCTGGTTTGGAGGAGCTCT	1	+	140959972-140960021	1qF	Mus musculus DENN/MADD domain containing 1B (Dennd1b), transcript variant 2, mRNA.				4930467M19Rik; 4632404N19Rik; F730008N07Rik; MGC51484	4930467M19Rik; 4632404N19Rik; F730008N07Rik; MGC51484
Mus musculus	RefSeq	ILMN_222077	ILMN_222077	FST	NM_008046.2	NM_008046.2		14313	124517700	NM_008046.2	Fst	NP_032072.1	ILMN_1228958	004610110	S	795	CTGCCACCTGAGAAAGGCCACCTGCTTGCTGGGCAGATCCATTGGATTAG	13	-	115245349-115245398	13qD2.2	Mus musculus follistatin (Fst), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IGI]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IGI]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of hair follicle development [goid 51798] [evidence ISO]		AL033346	AL033346
Mus musculus	MEEBO	ILMN_185096	ILMN_185096	AW047325	scl5655.4.1_231				51765851	XM_193580	AW047325		ILMN_2691337	007160612	S	2189	TGACGACAGTACAGGAAGTGAGCCGCCATTATCACCTCCAGAAAGGCTCC										
Mus musculus	MEEBO	ILMN_185096	ILMN_185096	AW047325	scl5655.4.1_231				51765851	XM_193580	AW047325		ILMN_1238949	007040747	S	10	TCAGAGGAAAGATTCACTGTGACAAGGAACACTGTGAATAAAGAGAAAAC										
Mus musculus	MEEBO	ILMN_185096	ILMN_185096	AW047325	scl5655.4.1_231				51765851	XM_193580	AW047325		ILMN_1243760	003870136	S	16	CAGTGCTAATGACAACAAGAGGATTAAGATGCGGAGCCTAGCAAAGAGGG										
Mus musculus	RefSeq	ILMN_201030	ILMN_201030	LOC384715	XM_357811.1	XM_357811.1			38088028	XM_357811.1	LOC384715		ILMN_2540840	003360543	S	323	AACTGGAGAGGGGACCCCTAACTCCACAGGCAGAAGTTTTAACACTGGCC										
Mus musculus	RefSeq	ILMN_214568	ILMN_214568	STK19	NM_019442.3	NM_019442.3		54402	118130750	NM_019442.3	Stk19	NP_062315.1	ILMN_1232972	004810471	S	175	GGGCTGTTCGAGGATGCGCTGCCGCCCATCGCGCTGAGGAGCCAAGTGTA	17	-	34973751-34973800	17qB1	Mus musculus serine/threonine kinase 19 (Stk19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	RP1; G11	RP1; G11
Mus musculus	RefSeq	ILMN_214568	ILMN_214568	STK19	NM_019442.3	NM_019442.3		54402	118130750	NM_019442.3	Stk19	NP_062315.1	ILMN_2649355	003400408	S	611	TACTGAGCATGGTGCGGAAGGCCAAGTACCGGGAGCTTGCCTTGTCAGAG	17	-	34969450-34969486:34969410-34969422	17qB1	Mus musculus serine/threonine kinase 19 (Stk19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	RP1; G11	RP1; G11
Mus musculus	RefSeq	ILMN_214568	ILMN_214568	STK19	NM_019442.3	NM_019442.3		54402	118130750	NM_019442.3	Stk19	NP_062315.1	ILMN_2751865	006510307	S	373	TGTGATGGCCGACCATGTGCTGGGGCGGTGCAGAAGTTCCTGGCCTCAGT	17	-	34973480-34973511:34973394-34973411	17qB1	Mus musculus serine/threonine kinase 19 (Stk19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	RP1; G11	RP1; G11
Mus musculus	RefSeq	ILMN_196332	ILMN_215275	INTS2	NM_027421.2	NM_027421.2		70422	86476083	NM_027421.2	Ints2	NP_081697.2	ILMN_2664494	003130379	S	5607	CAGAAAAACTTCCAGAAAGGTCTCATTTACAAACAAAACGGGAGCAGTTG	11	-	86024450-86024499	11qC	Mus musculus integrator complex subunit 2 (Ints2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			2810417D08Rik; AA408260; mKIAA1287; MGC141509; AI987735	2810417D08Rik; AA408260; mKIAA1287; MGC141509; AI987735
Mus musculus	RefSeq	ILMN_215275	ILMN_215275	INTS2	NM_027421.2	NM_027421.2		70422	86476083	NM_027421.2	Ints2	NP_081697.2	ILMN_2657510	000070307	S	3917	CATTGTATTGAAAGCACAATAATTGAAATAATAAACATGAGTGTTAGTGG	11	-	86026140-86026189	11qC	Mus musculus integrator complex subunit 2 (Ints2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			2810417D08Rik; AA408260; mKIAA1287; MGC141509; AI987735	2810417D08Rik; AA408260; mKIAA1287; MGC141509; AI987735
Mus musculus	RefSeq	ILMN_218267	ILMN_218267	APOBEC3	NM_030255.2	NM_030255.2		80287	85861171	NM_030255.2	Apobec3	NP_084531.2	ILMN_1259368	007210349	S	1556	CTCCCCTCACCCTCCCGCCATCAATAGGTACTTAATTTTGTACTTGAAAT	15	+	79738105-79738154	15qE1	Mus musculus apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 (Apobec3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2 [goid 16814] [evidence IEA]	CEM15; BC003314; MGC7002; Arp3	CEM15; BC003314; MGC7002; Arp3
Mus musculus	RefSeq	ILMN_186961	ILMN_186961	ZFP97	NM_011765.4	NM_011765.4		22759	110815835	NM_011765.4	Zfp97	NP_035895.2	ILMN_3145782	003800475	A	1335	TGAATGTAACCAGTGTGGTAAAACCTTTGCACGACACAGTCAGCTTCAAA	17	+	17283599-17283648	17qA3.1	Mus musculus zinc finger protein 97 (Zfp97), mRNA. XM_920229 XM_920242 XM_920250 XM_920259 XM_920268 XM_920278 XM_920286	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	NGD16-4	NGD16-4
Mus musculus	RefSeq	ILMN_186961	ILMN_186961	ZFP97	NM_011765.4	NM_011765.4		22759	110815835	NM_011765.4	Zfp97	NP_035895.2	ILMN_3067698	004780347	I	421	CATCAGTTACATAAGGACACTGGATCTTTCATGTCTTATACTGATCGTCA	17	+	17281508-17281557	17qA3.1	Mus musculus zinc finger protein 97 (Zfp97), mRNA. XM_920229 XM_920242 XM_920250 XM_920259 XM_920268 XM_920278 XM_920286	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	NGD16-4	NGD16-4
Mus musculus	RefSeq	ILMN_197132	ILMN_197132	LOC381336	XM_355296.1	XM_355296.1			38074232	XM_355296.1	LOC381336		ILMN_2527028	001690364	S	470	GCGCAGAGTTAGTGCCTGAGGACCCAGTTCAGTGCTGGAGGAAGACAACC										
Mus musculus	RefSeq	ILMN_240786	ILMN_240786	ANKRD34A	NM_001024851.3	NM_001024851.3		545554	122114647	NM_001024851.3	Ankrd34a	NP_001020022.2	ILMN_3020599	005390437	I	2057	TTGTGCTAGGGTCCCAGACTCACATTTGTTCCGAAGCAGCAGGGAGCCCC	3	+	96401627-96401636:96401637-96401676	3qF2.1	Mus musculus ankyrin repeat domain 34A (Ankrd34a), mRNA.					
Mus musculus	RefSeq	ILMN_219133	ILMN_219133	NPM2	NM_181345.2	NM_181345.2		328440	142348367	NM_181345.2	Npm2	NP_851990.1	ILMN_2704678	003780100	S	608	GCTAGAGGAGATACCTGTCAAACAAGTCAAAAGGGTGGCTCCCCAGAAGC	14	-	71048083-71048132	14qD2	Mus musculus nucleophosmin/nucleoplasmin 2 (Npm2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC123506; MGC123507	MGC123506; MGC123507
Mus musculus	RefSeq	ILMN_197040	ILMN_313840	LOC667269	XR_032025.1	XR_032025.1		667269	149263510	XR_032025.1	LOC667269		ILMN_1257328	003800612	S	283	AGGCCATCAAGCCCAAGATGCCAAAGGGCCCCAGCCCCAAACTCAAGCGG	12	-	104266337-104266386	12qE	PREDICTED: Mus musculus similar to ribosomal protein (LOC667269), misc RNA.					
Mus musculus	RefSeq	ILMN_215842	ILMN_215842	CD200R1	NM_021325.2	NM_021325.2		57781	40254537	NM_021325.2	Cd200r1	NP_067300.1	ILMN_2819717	003850259	S	1068	GGAGGATGAAATGCAGCCTTATGCTAGCTATACAGAGAAGAGCAATCCAC	16	+	44794323-44794372	16qB4	Mus musculus CD200 receptor 1 (Cd200r1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	CD200R; Mox2r; OX2R	CD200R; Mox2r; OX2R
Mus musculus	RefSeq	ILMN_215842	ILMN_215842	CD200R1	NM_021325.2	NM_021325.2		57781	40254537	NM_021325.2	Cd200r1	NP_067300.1	ILMN_2819724	004280017	S	1477	AACTGAGTTTCCTCAAGAAATAACTGCAGGAGGAACAATCATCACTAAAG	16	+	44794732-44794781	16qB4	Mus musculus CD200 receptor 1 (Cd200r1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	CD200R; Mox2r; OX2R	CD200R; Mox2r; OX2R
Mus musculus	RefSeq	ILMN_197975	ILMN_197975	LOC268876	XM_194996.2	XM_194996.2			38079922	XM_194996.2	LOC268876		ILMN_1223729	006250554	S	46	GGAGGGTGGGAGATGGCTGTGAGGTCAGCTTCAGCTTTGAGCGACTTTGT										
Mus musculus	MEEBO	ILMN_217219	ILMN_217219	4930511H01RIK	scl17181.16.1_330	NM_029453.1			21313093	NM_029453.1	4930511H01Rik		ILMN_1258949	001110097	S	2101	CCTATCTCCACCTGTTCACCCCAACCCATAACCAGAATTAAAGCGTGCGC										
Mus musculus	RefSeq	ILMN_216344	ILMN_216344	TMEM135	NM_028343.3	NM_028343.3		72759	142374421	NM_028343.3	Tmem135	NP_082619.2	ILMN_2669991	006620195	S	3300	CTGTCCAGCTCAGAAGGGTAGCGCACGGACATGCAGTGACGACCGAGAAA	7	-	96288383-96288432	7qE1	Mus musculus transmembrane protein 135 (Tmem135), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2810439K08Rik; AW319712	2810439K08Rik; AW319712
Mus musculus	RefSeq	ILMN_220730	ILMN_220730	FOXN3	NM_183186.2	NM_183186.2		71375	51093869	NM_183186.2	Foxn3	NP_899009.2	ILMN_2844097	005130703	S	2338	GGCTGTGCCCTCTTAACTGCCCAAGGAAAAGCAATCATGCCCAAGAAATG	12	-	100433527-100433576	12qE	Mus musculus forkhead box N3 (Foxn3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	5430426H20Rik; AA589593; AW556347; MGC107530; HTLFL1; Ches1; MGC36260; Ches1l	5430426H20Rik; AA589593; AW556347; MGC107530; HTLFL1; Ches1; MGC36260; Ches1l
Mus musculus	MEEBO	ILMN_190683	ILMN_190683	9430093I07RIK	scl0109278.1_112						9430093I07Rik		ILMN_1218109	000070064	S	20	ATTGGGAAAGCCTTCATAAGGGAGGCCATATGTAAAACCACCCTGGTCCG										
Mus musculus	Riken	ILMN_205710	ILMN_205710	ORC4	ri|C430020D18|PX00079E19|AK049534|2134					AK049534	Orc4		ILMN_1220822	005270170	S	1573	GGACACACTCAGATTGTCTTCTAGGAAGGAGGTGTGTCTTCTTGGTCCCT										
Mus musculus	MEEBO	ILMN_221170	ILMN_221170	4732441L20RIK	scl24039.3.1_318				51709371	XM_485425	4732441L20Rik		ILMN_2731865	004670072	S	3931	GCTGGGGGCTGTTTATGCATCCGTTGCTGTGTGAGCATGAGTTGGCTTTA										
Mus musculus	RefSeq	ILMN_209659	ILMN_310412	LOC100043527	XM_001480106.1	XM_001480106.1		100043527	149255323	XM_001480106.1	LOC100043527	XP_001480156.1	ILMN_1260088	004810044	S	186	GGTGACGTGCTCACCCTATTGGAGTCAGAAAGAGAAGCTCGAAGGTTGCG	6	+	86284181-86284230	6qD1	PREDICTED: Mus musculus similar to ribosomal protein S28 (LOC100043527), mRNA.					
Mus musculus	MEEBO	ILMN_224196	ILMN_224196	DNCLC1	scl056455.3_23				31981034	NM_019682	Dnclc1		ILMN_2776419	003370102	S	283	TGTGGGCCGAAACTTCGGTAGTTATGTGACACATGAAACCAAACACTTCA										
Mus musculus	Riken	ILMN_205537	ILMN_205537	F8	ri|D130058E20|PX00185K23|AK051579|3751					AK051579	F8		ILMN_1246702	002030193	S	2051	CAAGAACACCTGTCCAAGAGTAGCTCTGCCTATGACTACCTGGGGCCTCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	Riken	ILMN_203694	ILMN_203694	9630013P03RIK	ri|9630013P03|PX00115A17|AK035883|2803					AK035883	9630013P03Rik		ILMN_2559272	003390470	S	2640	TCCTTGGTCAGGGACAGCAGTGCTCATCAGGGCAAATGAAGAGCCAGCAT										
Mus musculus	RefSeq	ILMN_216265	ILMN_216265	DEFB13	NM_139223.3	NM_139223.3		246083	133778941	NM_139223.3	Defb13	NP_631969.1	ILMN_1239958	005490292	S	132	GGCCAATGTGAAGCTGAGTGCTTTACCTTCGAGCAAAAGATTGGGACCTG	8	+	23059002-23059051	8qA2	Mus musculus defensin beta 13 (Defb13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	RefSeq	ILMN_214823	ILMN_214823	EAR11	NM_053113.2	NM_053113.2		93726	31981459	NM_053113.2	Ear11	NP_444343.2	ILMN_2890019	001980095	S	566	GTTGGGAAGAACCGAGTCCTCTGTTTGCACTGCATGTCAGCATCTGTCCT	14	-	51875011-51875060	14qC1	Mus musculus eosinophil-associated, ribonuclease A family, member 11 (Ear11), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence ISS]		
Mus musculus	RefSeq	ILMN_211210	ILMN_211210	PAX2	NM_011037.2	NM_011037.2		18504	34536824	NM_011037.2	Pax2	NP_035167.2	ILMN_2949326	004860524	S	784	GCTCTGGATCGAGTCTTTGAGCGTCCTTCCTATCCCGATGTCTTCCAGGC	19	+	44890499-44890548	19qC3	Mus musculus paired box gene 2 (Pax2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is a transient excretory organ of the embryo [goid 1823] [evidence IMP]; A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell [goid 60231] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43069] [evidence IMP]; Any process that modulates the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43067] [evidence IGI]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Pax-2	Pax-2
Mus musculus	RefSeq	ILMN_199861	ILMN_199861	LOC381524	XM_358609.1	XM_358609.1			38078317	XM_358609.1	LOC381524		ILMN_2536748	006290154	S	543	ATCAGAGACCCTGCACATCAGAGATCCTGGTTGATGCTTACCACAATGCC										
Mus musculus	RefSeq	ILMN_209254	ILMN_209254	GTLF3B	NM_025294.4	NM_025294.4		24083	142372070	NM_025294.4	Gtlf3b	NP_079570.1	ILMN_2594049	006370368	S	3825	GGTACATGTTGCACTCCACGTGAGGTTTTAGGGGTCCATTTTCCCCAGCA	11	-	60716030-60716079	11qB2	Mus musculus gene trap locus F3b (Gtlf3b), mRNA.				F3-2; AI256713	F3-2; AI256713
Mus musculus	Riken	ILMN_204130	ILMN_204130	SEMA5A	ri|B130050A17|PX00158O10|AK045236|2376					AK045236	Sema5a		ILMN_1223297	007320358	S	2011	CGCTGCAGTTCTCTTTGAACTGTTCTCACAGTTGTTGGGTAGGAGTACAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	 [goid 8046] [evidence IDA]		
Mus musculus	RefSeq	ILMN_250820	ILMN_250820	BC030499	NM_001045522.1	NM_001045522.1		216976	113865902	NM_001045522.1	BC030499	NP_001038987.1	ILMN_2822160	004540102	S	860	AAGGTGACTTAAGGATGTGAGTGACAGCCCGGTGTGGTGGCGCACGCCTT	11	+	78105449-78105498	11qB5	Mus musculus cDNA sequence BC030499 (BC030499), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	BC037104	BC037104
Mus musculus	RefSeq	ILMN_221604	ILMN_221604	GJA4	NM_008120.2	NM_008120.2		14612	34328122	NM_008120.2	Gja4	NP_032146.1	ILMN_2737704	000770672	S	1433	CCCTGGGTTTTCATCACACCCCACTTCTCCTGGGAAAAAGCACTGATGCA	4	-	126988806-126988855	4qD2.2	Mus musculus gap junction protein, alpha 4 (Gja4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]		AW558810; Cx37; AU020209; Cnx37; Gja-4	AW558810; Cx37; AU020209; Cnx37; Gja-4
Mus musculus	Riken	ILMN_206630	ILMN_206630	7030401E22RIK	ri|7030401E22|PX00312M17|AK078559|2273					AK078559	7030401E22Rik		ILMN_2581513	001030228	S	1900	GACAAAGACCTAGATCCCTGTTCTCACCTGCAGAAACCCCAGGAGTTCTC										
Mus musculus	RefSeq	ILMN_187957	ILMN_320564	LOC100040061	XM_001474014.1	XM_001474014.1		100040061	149253844	XM_001474014.1	LOC100040061	XP_001474064.1	ILMN_2448599	002750010	S	71	CCTGCTGCTCCTGGGCTAGGTGGAGGGATGGGTTTAGCAACTGGAAAATG	5	+	34678151-34678200	5qB2	PREDICTED: Mus musculus hypothetical protein LOC100040061 (LOC100040061), mRNA.					
Mus musculus	RefSeq	ILMN_213057	ILMN_213057	MAP4K1	NM_008279.2	NM_008279.2		26411	101944152	NM_008279.2	Map4k1	NP_032305.2	ILMN_1252804	004010097	S	2535	AAGGCCCACGGATGACCCTACGGCCCCCAGCAACCTCTACATCCAGGAAT	7	+	29788134-29788183	7qB1	Mus musculus mitogen-activated protein kinase kinase kinase kinase 1 (Map4k1), mRNA.		A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hpk1; mHPK1	Hpk1; mHPK1
Mus musculus	RefSeq	ILMN_187449	ILMN_241744	OBSL1	NM_178884.3	NM_178884.3		98733	141802473	NM_178884.3	Obsl1	NP_849215.1	ILMN_2634412	004860301	S	4011	CTCCTGCTCAAACCAAAATCCTCTTTTTCTAATGTTTTCTAGTCCCTCAG	1	-	75487179-75487228	1qC4	Mus musculus obscurin-like 1 (Obsl1), mRNA.				AW822216	AW822216
Mus musculus	RefSeq	ILMN_191391	ILMN_258211	PCSK1N	NM_013892.2	NM_013892.2		30052	24475958	NM_013892.2	Pcsk1n	NP_038920.1	ILMN_2664455	003610039	S	795	CCCCTGAGAACGTACTGGGGGCTCTGCTACGCGTCAAACGCCTGGAGAAC	X	+	7500138-7500187	XqA1.1	Mus musculus proprotein convertase subtilisin/kexin type 1 inhibitor (Pcsk1n), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IDA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IDA]; The physiological process by which dietary excess is sensed by the central nervous system and results in a reduction in food intake and increased energy expenditure [goid 2021] [evidence IDA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IDA]	MGC19107; proSAAS; SAAS; Pan3; AI848336	MGC19107; proSAAS; SAAS; Pan3; AI848336
Mus musculus	RefSeq	ILMN_247102	ILMN_247102	JARID1C	NM_013668.2	NM_013668.2		20591	24475590	NM_013668.2	Jarid1c	NP_038696.1	ILMN_2970823	003830170	S	5234	GCACCATTCCAGAGACAAATCCAGGGCACATCAAACTGGGGGACCTCTCC	X	+	148707906-148707955	XqF3	Mus musculus jumonji, AT rich interactive domain 1C (Rbp2 like) (Jarid1c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Smcx; mKIAA0234	Smcx; mKIAA0234
Mus musculus	RefSeq	ILMN_192874	ILMN_247102	JARID1C	NM_013668.2	NM_013668.2		20591	24475590	NM_013668.2	Jarid1c	NP_038696.1	ILMN_1253604	003390373	S	574	CCAGGGCTCATCCTTAAAGATTCCCAATGTAGAACGGCGGATCTTGGACC	X	+	148674229-148674278	XqF3	Mus musculus jumonji, AT rich interactive domain 1C (Rbp2 like) (Jarid1c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Smcx; mKIAA0234	Smcx; mKIAA0234
Mus musculus	RefSeq	ILMN_197212	ILMN_231307	SPNA2	NM_001076554.1	NM_001076554.1		20740	115496849	NM_001076554.1	Spna2	NP_001070022.1	ILMN_1235010	001980114	S	1933	GCTGGCTGATTCCTTCCATCTGCAGCAGTTCTTCCGTGATTCTGATGAGC	2	+	29849373-29849422	2qB	Mus musculus spectrin alpha 2 (Spna2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	Spna-2; 2610027H02Rik	Spna-2; 2610027H02Rik
Mus musculus	RefSeq	ILMN_207512	ILMN_231307	SPNA2	NM_001076554.1	NM_001076554.1		20740	115496849	NM_001076554.1	Spna2	NP_001070022.1	ILMN_1260571	004810095	I	5673	TGTCTGATGACAACACCATCGGGCAGGAGGAGATCCAGCAACGGCTTGCA	2	+	29875508-29875557	2qB	Mus musculus spectrin alpha 2 (Spna2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	Spna-2; 2610027H02Rik	Spna-2; 2610027H02Rik
Mus musculus	RefSeq	ILMN_250754	ILMN_250754	ZSCAN21	NM_001044705.1	NM_001044705.1		22697	113374189	NM_001044705.1	Zscan21	NP_001038170.1	ILMN_3087187	003370328	A	1941	TCAAGGGTGCCTTGGAGGGAGAGCTACACAGTGATAGAGCAGACAGGAGG	5	+	138575217-138575266	5qG2	Mus musculus zinc finger and SCAN domain containing 21 (Zscan21), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Zfp-38; Zipro1; Zfp38; RU49; CTfin51; AI326272	Zfp-38; Zipro1; Zfp38; RU49; CTfin51; AI326272
Mus musculus	RefSeq	ILMN_184374	ILMN_250754	ZSCAN21	NM_001044705.1	NM_001044705.1		22697	113374189	NM_001044705.1	Zscan21	NP_001038170.1	ILMN_2418128	006550189	S	1442	GAGCTCAGACCTCCTTAAACATCAAAGGATGCACACGGAAGAGGCGCCCT	5	+	138574718-138574767	5qG2	Mus musculus zinc finger and SCAN domain containing 21 (Zscan21), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Zfp-38; Zipro1; Zfp38; RU49; CTfin51; AI326272	Zfp-38; Zipro1; Zfp38; RU49; CTfin51; AI326272
Mus musculus	RefSeq	ILMN_213446	ILMN_213446	PKP2	NM_026163.1	NM_026163.1		67451	21312959	NM_026163.1	Pkp2	NP_080439.1	ILMN_2927565	003710594	S	2647	CCACCAGGTTGCACCAGTATGGAATCAGTTTTACCCTGTGCAGATAATGG	16	+	16186046-16186095	16qA2	Mus musculus plakophilin 2 (Pkp2), mRNA.	A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IMP]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]		1200008D14Rik; AA516617; 1200012P04Rik	1200008D14Rik; AA516617; 1200012P04Rik
Mus musculus	RefSeq	ILMN_213261	ILMN_242821	KRT86	NM_010667.2	NM_010667.2		16679	142371366	NM_010667.2	Krt86	NP_034797.1	ILMN_2635325	002140138	S	1815	TCCTGACACTCCGCTAGAAACCACGTGACCCAGAGCATCTTCTTCCGGGT	15	+	101310269-101310318	15qF2	Mus musculus keratin 86 (Krt86), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt2-11; Khb4; Krt2-10; MHb4; Krt86	Krt2-11; Khb4; Krt2-10; MHb4; Krt86
Mus musculus	RefSeq	ILMN_213261	ILMN_242821	KRT86	NM_010667.2	NM_010667.2		16679	142371366	NM_010667.2	Krt86	NP_034797.1	ILMN_2732782	006350341	S	1723	CTGCCCCAGGATCCTCTTTGTCTGACTTTACCCGGGTCCTTAGCACGCTT	15	+	101310177-101310226	15qF2	Mus musculus keratin 86 (Krt86), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt2-11; Khb4; Krt2-10; MHb4; Krt86	Krt2-11; Khb4; Krt2-10; MHb4; Krt86
Mus musculus	RefSeq	ILMN_199826	ILMN_199826	LOC383065	XM_356834.1	XM_356834.1			38077705	XM_356834.1	LOC383065		ILMN_2536623	000450433	S	121	GAAGGCGAGCATGGTTCCACGTCCATCGGAGAGCATTCCATCATAGGCCA										
Mus musculus	RefSeq	ILMN_223129	ILMN_223129	PRKACB	NM_011100.3	NM_011100.3		18749	34328443	NM_011100.3	Prkacb	NP_035230.1	ILMN_1217408	004250270	S	3975	GGGTATTGCTGTCTTGTTCTTGGTGTGTACCTGTACTGATTGCCCCTTGG	3	-	146392830-146392879	3qH2	Mus musculus protein kinase, cAMP dependent, catalytic, beta (Prkacb), mRNA.	An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cAMP [goid 4691] [evidence IDA]	Pkacb	Pkacb
Mus musculus	RefSeq	ILMN_198980	ILMN_329490	LOC235279	XR_033573.1	XR_033573.1		235279	149259898	XR_033573.1	LOC235279		ILMN_1231838	006370338	S	93	GCCTAAGAAGAAAGATCGGGGCACACTGAAGGAAAGAGAATTCCCCCAGC	9	+	39972049-39972098	9qA5.1	PREDICTED: Mus musculus similar to rRNA-processing protein FCF1 homolog (LOC235279), misc RNA.					
Mus musculus	RefSeq	ILMN_215879	ILMN_215879	6720460F02RIK	NM_144526.2	NM_144526.2		109212	27735009	NM_144526.2	6720460F02Rik	NP_653109.2	ILMN_2994354	005870767	S	1211	TTTCACTGCTGCTTCCCACCCCCAGGACCCCACAGGAAGAGAGGAGGTAT	11	+	71863310-71863359	11qB4	Mus musculus RIKEN cDNA 6720460F02 gene (6720460F02Rik), mRNA.				2610008F03Rik; RP23-207N15.1; AI115087	2610008F03Rik; RP23-207N15.1; AI115087
Mus musculus	MEEBO	ILMN_213604	ILMN_213604	EAR5	scl2746.1.1_251				9506558	NM_019398	Ear5		ILMN_2771700	006900471	S	332	GGGCAAGGAATTATACCCACTGCAGATACAAAACAACAGGAGCAAAGAAG								Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213200	ILMN_231791	ITGB4	NM_001005608.2	NM_001005608.2		192897	110735425	NM_001005608.2	Itgb4	NP_001005608.2	ILMN_2634689	003850326	S	5783	GACCCGGACCTTAACGGCCAGTGGCTCTCTCAGCACTCATATGGACCAAC	11	+	115869348-115869397	11qE2	Mus musculus integrin beta 4 (Itgb4), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IDA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD104; AA407042; C230078O20	CD104; AA407042; C230078O20
Mus musculus	RefSeq	ILMN_219826	ILMN_219826	FAM176B	NM_172145.3	NM_172145.3		230752	142353701	NM_172145.3	Fam176b	NP_742157.1	ILMN_2714073	000990747	S	641	AGCTGCATCCCAGCAGCATGGATGCCCCAAGAAGGGACATGGAGCTACTC	4	+	125826206-125826222:125826223-125826255	4qD2.2	Mus musculus family with sequence similarity 176, member B (Fam176b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC36197	MGC36197
Mus musculus	Riken	ILMN_206090	ILMN_206090	RPGRIP1	ri|A930039K03|PX00316F10|AK044753|4172					AK044753	Rpgrip1		ILMN_1228353	000150301	S	4113	GCCAGGTATGGTGCTGGAGAGGCAGTTGAGAGTTCTACCTACAGATGCCC						A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211608	ILMN_211608	MSLN	NM_018857.1	NM_018857.1		56047	9256567	NM_018857.1	Msln	NP_061345.1	ILMN_1231379	004920300	S	1933	GGATTTGTATTAATATGGATTCCAGCTCTGCTCCCAGCTTTAAGGCTGAG	17	-	25885690-25885739	17qA3.3	Mus musculus mesothelin (Msln), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MPF	MPF
Mus musculus	RefSeq	ILMN_210934	ILMN_210934	APLP2	NM_009691.2	NM_009691.2		11804	118130287	NM_009691.2	Aplp2	NP_033821.1	ILMN_1216689	000270593	S	3369	GGCCCTAGCCGTGCCTCGTCCCACTATGCACAGATTGAAACTTCACCTAC	9	-	30957213-30957262	9qA4	Mus musculus amyloid beta (A4) precursor-like protein 2 (Aplp2), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IGI]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI790698	AI790698
Mus musculus	RefSeq	ILMN_209050	ILMN_247615	PPP3R2	NM_001004025.3	NM_001004025.3		19059	146198817	NM_001004025.3	Ppp3r2	NP_001004025.1	ILMN_2592092	002710075	S	467	CGATGGCCGGATATCCTTTGAAGAGTTCAGTGATGTGGTCAAGACCATGG				4qB1	Mus musculus protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II) (Ppp3r2), mRNA.		The physical displacement of sperm stored from previous mating encounters [goid 7321] [evidence TAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence TAS]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate, dependent on the presence of calcium ions [goid 4723] [evidence ISS]		
Mus musculus	RefSeq	ILMN_256316	ILMN_256316	CD180	NM_008533.2	NM_008533.2		17079	117320544	NM_008533.2	Cd180	NP_032559.2	ILMN_2905717	006370091	S	1984	GGGAGTCAGGCTCTCCGATGTCACGCTATCCTGTAGTATGGCAGCTGTGG	13	+	103496369-103496418	13qD1	Mus musculus CD180 antigen (Cd180), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ly78; F630107B15; RP105	Ly78; F630107B15; RP105
Mus musculus	RefSeq	ILMN_200875	ILMN_200875	LOC384628	XM_357753.1	XM_357753.1			38086737	XM_357753.1	LOC384628		ILMN_1215384	006550397	S	708	TCGTTTCTCCGCTAGGGTTCTGAGCTTGCTGCGTAGGTTTAGACTTCATC										
Mus musculus	RefSeq	ILMN_235014	ILMN_235014	OLFR311	NM_146537.1	NM_146537.1		258530	33239063	NM_146537.1	Olfr311	NP_666748.1	ILMN_2988070	007320474	S	578	ATGAGGAGGTGGGCTTTGCTGTCATTGGCTGCATTATCATGAGCTCCTTC	11	+	58655195-58655244	11qB1.3	Mus musculus olfactory receptor 311 (Olfr311), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR222-1; RP23-419P16.6	MOR222-1; RP23-419P16.6
Mus musculus	RefSeq	ILMN_215360	ILMN_221478	GYS1	NM_030678.3	NM_030678.3		14936	119672917	NM_030678.3	Gys1	NP_109603.2	ILMN_2658554	006370022	S	1692	ATGAGGAATTTGTCCGCGGCTGTCACCTTGGGGTCTTCCCCTCCTACTAT	7	+	52703678-52703727	7qB4	Mus musculus glycogen synthase 1, muscle (Gys1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Intracellular foci at which aggregated proteins have been sequestered [goid 16234] [evidence IDA]	The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UDP + (1,4)-alpha-D-glucosyl(n+1) [goid 4373] [evidence IMP]	Gys3	Gys3
Mus musculus	RefSeq	ILMN_211482	ILMN_233113	LOC674089	XM_974323.1	XM_974323.1		674089	94393661	XM_974323.1	LOC674089	XP_979417.1	ILMN_2690113	001500376	S	57	TGTCCTTACTTTAAAAGGTGTCCAGTGTGACGTGAAGCTGGTGGAGTCTG					PREDICTED: Mus musculus similar to Ig heavy chain V region 345 precursor (LOC674089), mRNA.					
Mus musculus	RefSeq	ILMN_209259	ILMN_209259	PRKX	NM_016979.1	NM_016979.1		19108	23956079	NM_016979.1	Prkx	NP_058675.1	ILMN_1238289	002100114	S	2849	GGGAAATATGTCCTGTTCTTAACTCTGAGTCCAGGGAGAGTTGTGCACCC	X	-	75007679-75007728	XqA7.3	Mus musculus protein kinase, X-linked (Prkx), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]	Pkare; PKX1	Pkare; PKX1
Mus musculus	RefSeq	ILMN_209259	ILMN_209259	PRKX	NM_016979.1	NM_016979.1		19108	23956079	NM_016979.1	Prkx	NP_058675.1	ILMN_2594094	007560022	S	1730	CTGGAAATTTTGGCACTTTGTGCTTGTGACATGTTCATTTTTTAAAGCTT	X	-	75008798-75008847	XqA7.3	Mus musculus protein kinase, X-linked (Prkx), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]	Pkare; PKX1	Pkare; PKX1
Mus musculus	RefSeq	ILMN_209259	ILMN_209259	PRKX	NM_016979.1	NM_016979.1		19108	23956079	NM_016979.1	Prkx	NP_058675.1	ILMN_2879858	001170554	S	3080	CAAATCCCAGCATCAACCTGGTGGCTCACAACTATCTGTAATGGGATCCG	X	-	75007448-75007497	XqA7.3	Mus musculus protein kinase, X-linked (Prkx), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]	Pkare; PKX1	Pkare; PKX1
Mus musculus	RefSeq	ILMN_223179	ILMN_223179	CLDN6	NM_018777.2	NM_018777.2		54419	31560428	NM_018777.2	Cldn6	NP_061247.1	ILMN_2941790	004490020	S	1335	TTTCTACCCTGAGACTTCCAACCTTTGGCCCCTGAATCCCATCGCCAAGG	17	+	23409897-23409946	17qA3.3	Mus musculus claudin 6 (Cldn6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AL024037	AL024037
Mus musculus	Riken	ILMN_202933	ILMN_202933	A230101J17RIK	ri|A230101J17|PX00063E16|AK039136|1632					AK039136	A230101J17Rik		ILMN_2553429	001240537	S	1148	CCTTGCCCTCGGGGTTCTATAGGGAGGAATAAAGGAGCCAGTGCATGTAG										
Mus musculus	RefSeq	ILMN_196662	ILMN_240408	ZFP508	XM_989242.1	XM_989242.1		240442	94405027	XM_989242.1	Zfp508	XP_994336.1	ILMN_1237504	003710333	S	3681	TCCATGCACGCCTTGTTTCCCCACGAGTGTCAGTGTCAGTAGCAACAGCC				18qE3	PREDICTED: Mus musculus zinc finger protein 508 (Zfp508), mRNA.					
Mus musculus	RefSeq	ILMN_196662	ILMN_240408	ZFP508	XM_989242.1	XM_989242.1		240442	94405027	XM_989242.1	Zfp508	XP_994336.1	ILMN_2596056	000620746	S	4358	GCAGACCAGAAGCTCTTCCTGTGGTTAGAGTAGCTCGGGGTAGATGTGTT				18qE3	PREDICTED: Mus musculus zinc finger protein 508 (Zfp508), mRNA.					
Mus musculus	RefSeq	ILMN_184934	ILMN_242659	TMSB10	NM_001039392.1	NM_001039392.1		19240	86476076	NM_001039392.1	Tmsb10	NP_001034481.1	ILMN_1225332	002070731	S	107	TGGGAATGCCACGTTGAGAGGCGTTCGCGGAAGGCGCGGGATCCAGGACG	6	-	72908070-72908119	6qC1	Mus musculus thymosin, beta 10 (Tmsb10), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]; The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers [goid 42989] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [evidence TAS]	Ptmb10; TB10	Ptmb10; TB10
Mus musculus	RefSeq	ILMN_248075	ILMN_248075	PPAPDC2	NM_028922.1	NM_028922.1		74411	77861907	NM_028922.1	Ppapdc2	NP_083198.1	ILMN_2824599	002480440	S	2397	TTCTCAGTAGGAGGAAGTAGGACCTTCGAGAGTGGGAGTCTGGTACACCC	19	+	29032313-29032362	19qC1	Mus musculus phosphatidic acid phosphatase type 2 domain containing 2 (Ppapdc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	4932443D16Rik	4932443D16Rik
Mus musculus	Riken	ILMN_202834	ILMN_202834	6030455K13RIK	ri|6030455K13|PX00057P18|AK031575|2120					AK031575	6030455K13Rik		ILMN_1258785	003450424	S	1931	CCTCTGTTCTTTTCCTCGACACCCTCCACAGACGATTCTAAAGGCAAGTG										
Mus musculus	RefSeq	ILMN_217997	ILMN_217997	INS2	NM_008387.3	NM_008387.3		16334	142350788	NM_008387.3	Ins2	NP_032413.1	ILMN_2690267	002000564	S	267	AACTGGAGCTGGGTGGAGGCCCGGGAGCAGGTGACCTTCAGACCTTGGCA	7	-	149864707-149864756	7qF5	Mus musculus insulin II (Ins2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence TAS]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence TAS]	AA986540; Mody; Ins-2; Mody4; proinsulin	AA986540; Mody; Ins-2; Mody4; proinsulin
Mus musculus	RefSeq	ILMN_215016	ILMN_215016	FGL2	NM_008013.3	NM_008013.3		14190	145301608	NM_008013.3	Fgl2	NP_032039.2	ILMN_2654554	002340242	S	3432	TTGCCTGTCACGAAACGAGAAAGCCATCTCTCTGAAAAGTAGTAACGCAG				5qA3	Mus musculus fibrinogen-like protein 2 (Fgl2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	musfiblp; AI385601	musfiblp; AI385601
Mus musculus	RefSeq	ILMN_214900	ILMN_214900	BXDC5	NM_027332.2	NM_027332.2		70285	144922726	NM_027332.2	Bxdc5	NP_081608.1	ILMN_1213929	000020431	S	675	CCTCGCCTATTTTTAAACATATAAAAGAATAGGAAAAGGCTTCCCATCAC	3	-	146175012-146175061	3qH2	Mus musculus brix domain containing 5 (Bxdc5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]	2310066N05Rik; Rpf1; MGC102255; 2210420E24Rik	2310066N05Rik; Rpf1; MGC102255; 2210420E24Rik
Mus musculus	RefSeq	ILMN_198919	ILMN_247550	OPCML	NM_177906.4	NM_177906.4		330908	118130550	NM_177906.4	Opcml	NP_808574.2	ILMN_1260032	000270441	S	1019	TCACCCTGTATGGGCCTGGAGCAGTGATTGATGGTGTAAACTCGGCCTCC	9	+	28710940-28710951:28727672-28727709	9qA4	Mus musculus opioid binding protein/cell adhesion molecule-like (Opcml), mRNA.				C230027C17; AI844366; 2900075O15Rik; Obcam; MGC99974; 3732419F12; Gm181	C230027C17; AI844366; 2900075O15Rik; Obcam; MGC99974; 3732419F12; Gm181
Mus musculus	MEEBO	ILMN_191607	ILMN_191607	SF3B5	scl38193.1.130_289				31341240	NM_175102	Sf3b5		ILMN_2674936	004830767	S	575	AGTGATCCCAGCATCGGCAAGCGAGGGAGAAGACTGCACGAGAGTGATGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]			
Mus musculus	MEEBO	ILMN_191607	ILMN_191607	SF3B5	scl38193.1.130_289				31341240	NM_175102	Sf3b5		ILMN_2480585	004830754	S	2	CCAGCCCAAATGACATTTAAGTCATCCCAAAGCCCTCACATTTAACTCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]			
Mus musculus	MEEBO	ILMN_190805	ILMN_190805	TMEM16D	scl37633.15.1_33	NM_178773.3			31581556	NM_178773.3	Tmem16d		ILMN_1229280	003520242	S	1	CCTTCTCTGGTGGTGGAATATGTAACAAGCTCTCACTGTTTTGTTACCCT										
Mus musculus	MEEBO	ILMN_222573	ILMN_222573	2310015L07RIK	scl069545.3_88	XM_132249.1			20840317	XM_132249.1	2310015L07Rik		ILMN_2751732	006280246	S	1270	ATAATTTTTAGGTATTAGCGTTATAGTAGGCAATATGATAAGTAAAATGA										
Mus musculus	MEEBO	ILMN_224041	ILMN_224041	PDZK1	scl22849.16.1_85				10946937	NM_021517	Pdzk1		ILMN_2773609	005050612	S	1826	GACCTCTTCCTTCTGCAGGCTTGAGCACCTGGGATGATTCACTGTCCATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221876	ILMN_318900	A830031A19RIK	XR_035402.1	XR_035402.1		268391	149261684	XR_035402.1	A830031A19Rik		ILMN_2741506	000990240	S	489	CGTACTTGCCTATGTATAGTGAAGAAAAGATATCTACACTCATGATTGAG	11	-	23949173-23949222	11qA3.2	PREDICTED: Mus musculus RIKEN cDNA A830031A19 gene (A830031A19Rik), misc RNA.					
Mus musculus	Riken	ILMN_205984	ILMN_205984	D130063H01RIK	ri|D130063H01|PX00185M14|AK051669|2725					AK051669	D130063H01Rik		ILMN_1220115	002190025	S	2409	ACTGTGCCCAGTCGAGGGGCTGACCTCTAGGCCTTAATGTCCTCCTGCAC										
Mus musculus	RefSeq	ILMN_198320	ILMN_239828	ARMC4	NM_001081393.1	NM_001081393.1		74934	124487092	NM_001081393.1	Armc4	NP_001074862.1	ILMN_2531267	002850240	S	2233	GGAGACCCGAGACCTGGTTAGACTGCATGGAGGACTTAAACCCCTGGCCA	18	-	7214657-7214706	18qA1	Mus musculus armadillo repeat containing 4 (Armc4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930463I21Rik	4930463I21Rik
Mus musculus	RefSeq	ILMN_222472	ILMN_239828	ARMC4	NM_001081393.1	NM_001081393.1		74934	124487092	NM_001081393.1	Armc4	NP_001074862.1	ILMN_1254689	005260445	S	902	GACATGGAAACTCTGTGCCTTACCTGCAGCACAGAAGGGGTGTTTTTAAA	18	-	7285348-7285397	18qA1	Mus musculus armadillo repeat containing 4 (Armc4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930463I21Rik	4930463I21Rik
Mus musculus	Riken	ILMN_206293	ILMN_206293	RNF10	ri|A730010E08|PX00149I10|AK080426|1672					AK080426	Rnf10		ILMN_1216053	004050441	S	1323	AGGCTTGGACTTTTGGAGCTGGGGCCACCATTGTGAAGAGGAGGAGGAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_206268	ILMN_206268	D030038A19RIK	ri|D030038A19|PX00180N09|AK083512|2932					AK083512	D030038A19Rik		ILMN_1233295	000840102	S	2261	CAGTTTCCTGCAGACGGGGATAATATGTCACTCAATTCAGCGTGGCCATG										
Mus musculus	MEEBO	ILMN_189267	ILMN_189267	GJA7	scl39497.4_27				6680006	NM_008122	Gja7		ILMN_2752275	004120279	S	1830	TCCCAGGCACATGTTCTCAGCAATAATGCAGTTGCAGAACTTTCAGGTTG										
Mus musculus	MEEBO	ILMN_189267	ILMN_189267	GJA7	scl39497.4_27				6680006	NM_008122	Gja7		ILMN_1232733	000620612	S	9	TAAAGGAAAAAATCCTTGTAAATAATGTCTGTTAAAGGGTAATGTTATTA										
Mus musculus	RefSeq	ILMN_197797	ILMN_255064	GM829	NM_001033412.1	NM_001033412.1		329839	85701910	NM_001033412.1	Gm829	NP_001028584.1	ILMN_1234025	001740133	S	537	AGTGAGATGTCAGACTCAGAGGCCAGGGAGCATCCAGACTCCTAGGGCGT	4	+	45736025-45736074	4qB1	Mus musculus gene model 829, (NCBI) (Gm829), mRNA.					
Mus musculus	MEEBO	ILMN_194059	ILMN_194059	5430425J12RIK	scl44630.3_726				51767967	XM_484284	5430425J12Rik		ILMN_1246853	004210543	S	9	CAGTATTGACTCTGAGCCCGCAGTTAAGCCCACGATATTAGCCTCACCCC										
Mus musculus	RefSeq	ILMN_200411	ILMN_200411	LOC383208	XM_356924.1	XM_356924.1			38081724	XM_356924.1	LOC383208		ILMN_1245856	004280424	S	641	CCAGTTGGTCATTTCCTGTGGGGTCTAGTCAAGTGGCTCTGTCTGCTGTG										
Mus musculus	RefSeq	ILMN_218774	ILMN_218774	ARL2BP	NM_024269.3	NM_024269.3		107566	142360051	NM_024269.3	Arl2bp	NP_077231.1	ILMN_2700022	007150369	S	54	CTAGGCCGGTGCCACTCCCGCGTGCGGTCACATTCACCAGCAGATAGGTG	8	+	97191059-97191108	8qC5	Mus musculus ADP-ribosylation factor-like 2 binding protein (Arl2bp), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence ISO]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence ISO]	6330544B05Rik; Bart1; 1700027H16Rik; 1700010P10Rik; AI482273; AI849834	6330544B05Rik; Bart1; 1700027H16Rik; 1700010P10Rik; AI482273; AI849834
Mus musculus	RefSeq	ILMN_212964	ILMN_212964	CTPS2	NM_018737.4	NM_018737.4		55936	148747586	NM_018737.4	Ctps2	NP_061207.1	ILMN_2737171	006770528	S	2634	GCCCCATCTTTTTATTACACTCTCATCCTGTTCTCACTGAAACCCTTCTT				XqF4-qF5	Mus musculus cytidine 5'-triphosphate synthase 2 (Ctps2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	CTPsH	CTPsH
Mus musculus	MEEBO	ILMN_189581	ILMN_189581	SYN2	scl777.1.1_10				8567409	NM_013681	Syn2		ILMN_2462532	001990411	S	20	TGATCTGGTCTCATGCTAAGAAGCCTGGGGAATGGTCACCTTCTGAGACT						A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence TAS]		
Mus musculus	MEEBO	ILMN_185811	ILMN_185811	1810073N04RIK	scl40645.2_300				31541851	NM_024249	1810073N04Rik		ILMN_2430203	004730722	S	9	GAGATGTGTCTGTTTGATACGCTAAGTGGGTGAAAATGGTCTACTGCCCT										
Mus musculus	RefSeq	ILMN_210977	ILMN_210977	PRPF3	NM_027541.2	NM_027541.2		70767	31980656	NM_027541.2	Prpf3	NP_081817.2	ILMN_2941431	002140681	S	2518	GTTGGAGTCCACCGACTGAGACTACTGTTAGCCCTTGTATCTTCTTTGCC	3	-	95916191-95916223:95916224-95916240	3qF2.1	Mus musculus PRP3 pre-mRNA processing factor 3 homolog (yeast) (Prpf3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		3632413F13Rik	3632413F13Rik
Mus musculus	RefSeq	ILMN_210977	ILMN_210977	PRPF3	NM_027541.2	NM_027541.2		70767	31980656	NM_027541.2	Prpf3	NP_081817.2	ILMN_2698485	001440025	S	1412	TTTTTGACCCCAGAGTCTCAATTGCCCCTTCCCAGCGCCAAAGACGCACT	3	-	95930386-95930435	3qF2.1	Mus musculus PRP3 pre-mRNA processing factor 3 homolog (yeast) (Prpf3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		3632413F13Rik	3632413F13Rik
Mus musculus	RefSeq	ILMN_210977	ILMN_210977	PRPF3	NM_027541.2	NM_027541.2		70767	31980656	NM_027541.2	Prpf3	NP_081817.2	ILMN_2941430	003840095	S	2634	GTGCCAGGCCGATACCAGGGCAAAAAGACTACCAAGTTCACCCAGTCAGC	3	-	95916075-95916124	3qF2.1	Mus musculus PRP3 pre-mRNA processing factor 3 homolog (yeast) (Prpf3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		3632413F13Rik	3632413F13Rik
Mus musculus	RefSeq	ILMN_198459	ILMN_311524	LOC668536	XR_034741.1	XR_034741.1		668536	149270565	XR_034741.1	LOC668536		ILMN_1258456	006100296	S	276	TCCGAGTATGCTTGCCCAGAAAACACAATGAGGATGAGCATTCCCCAGAC	19	+	51866965-51867014	19qD2	PREDICTED: Mus musculus similar to ribosomal protein L31 (LOC668536), misc RNA.					
Mus musculus	Riken	ILMN_202369	ILMN_202369	4930522L02RIK	ri|4930522L02|PX00033E02|AK015870|1314					AK015870	4930522L02Rik		ILMN_1230651	001770064	S	377	GCAGCAAGAAAGGGGAGAACCATTGAGTAGTCACAGTGGGAAGACCCAGC										
Mus musculus	MEEBO	ILMN_191870	ILMN_191870	MKIAA1065	scl0001411.1_4				50510770	AK173093	mKIAA1065		ILMN_2482937	000360424	S	10	CTTGCTCCAGGATTTGGGACAGGACGCTGATTTTGCACATCTTAGGACCC										
Mus musculus	MEEBO	ILMN_215175	ILMN_215175	FBN1	scl18732.66_476				6679758	NM_007993	Fbn1		ILMN_1223552	000110048	S	9763	GTTCTTGTGTGGATTAAGGCTGGAGGGGCCTTTCTGGAGGTGAAATAAAG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins [goid 1527] [evidence TAS]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212351	ILMN_212351	2900010M23RIK	NM_026063.1	NM_026063.1		67267	13385559	NM_026063.1	2900010M23Rik	NP_080339.1	ILMN_2877367	001850327	S	428	GACCGTGGGGTCTGATACTCATCAATAAAACTGCCTGGTTTCTCCCACCC				17qA3.3	Mus musculus RIKEN cDNA 2900010M23 gene (2900010M23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222600	ILMN_222600	MRPS9	NM_023514.3	NM_023514.3		69527	142356061	NM_023514.3	Mrps9	NP_076003.2	ILMN_1233192	001010333	S	1173	AAGCGCTGAAACTTTTCCCAGGAGAGCGAGGAGCACAGCGTCTTCGTGCC	1	+	42962332-42962341:42962342-42962381	1qB	Mus musculus mitochondrial ribosomal protein S9 (Mrps9), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	mg637; MGC144643; AW322516; 2310002A08Rik	mg637; MGC144643; AW322516; 2310002A08Rik
Mus musculus	RefSeq	ILMN_219794	ILMN_219794	ILDR1	NM_134109.1	NM_134109.1		106347	19527337	NM_134109.1	Ildr1	NP_598870.1	ILMN_1238808	006840703	S	829	CCCTGTACTGGGGGGCGGACAGGAGCTCCCAAGTTTCATCTTATGCAATG	16	+	36721687-36721736	16qB3	Mus musculus immunoglobulin-like domain containing receptor 1 (Ildr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AU041483; AU044638	AU041483; AU044638
Mus musculus	RefSeq	ILMN_219794	ILMN_219794	ILDR1	NM_134109.1	NM_134109.1		106347	19527337	NM_134109.1	Ildr1	NP_598870.1	ILMN_2734693	002190382	S	2597	CTAGGTGGGTTTTGCCACATACAGAGTTCCAGGAGGAAAGAGCTGAACCT	16	+	36726546-36726595	16qB3	Mus musculus immunoglobulin-like domain containing receptor 1 (Ildr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AU041483; AU044638	AU041483; AU044638
Mus musculus	RefSeq	ILMN_219794	ILMN_219794	ILDR1	NM_134109.1	NM_134109.1		106347	19527337	NM_134109.1	Ildr1	NP_598870.1	ILMN_2857684	003850747	S	2714	GATTGATGTGTAGGCTTTCTCTGAGTAGACTGGAAGGAGATGGTTCCAAC	16	+	36726663-36726712	16qB3	Mus musculus immunoglobulin-like domain containing receptor 1 (Ildr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AU041483; AU044638	AU041483; AU044638
Mus musculus	RefSeq	ILMN_192619	ILMN_224421	CCDC112	XM_911119.3	XM_911119.3		240261	149270060	XM_911119.3	Ccdc112	XP_916212.3	ILMN_1233957	002030437	S	2425	GTGAAAGCAGAACTCAAGCCAGCTTTTCATAGAAAGCACCTTATGTCATA				18qC	PREDICTED: Mus musculus coiled-coil domain containing 112 (Ccdc112), mRNA.					
Mus musculus	RefSeq	ILMN_214804	ILMN_214804	REEP3	NM_178606.4	NM_178606.4		28193	146198669	NM_178606.4	Reep3	NP_848721.1	ILMN_1250538	007210241	S	2780	TCATTTCTCATGAACCAGACCTGCTCTGAACCAATGCTGTGCGGCATGGG				10qB5.1	Mus musculus receptor accessory protein 3 (Reep3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW742655; D10Ucla1; AI265725	AW742655; D10Ucla1; AI265725
Mus musculus	RefSeq	ILMN_199631	ILMN_199631	LOC382809	XM_356688.1	XM_356688.1			38075395	XM_356688.1	LOC382809		ILMN_1245410	005860537	S	285	AGCTCTTCCTAGCATCGGTCGGAGCTGCCAGGGTGGATTTGTTGGCTGCT										
Mus musculus	RefSeq	ILMN_209114	ILMN_309916	OTTMUSG00000010657	NM_001083918.1	NM_001083918.1		666532	145046226	NM_001083918.1	OTTMUSG00000010657	NP_001077387.1	ILMN_2592681	000650047	S	2683	CATTTCAAAAGGAAACTATTTAAGGTCTTTAATGCAGTCCTAAAAATATC	4	+	146554613-146554662	4qE1	Mus musculus predicted gene, OTTMUSG00000010657 (OTTMUSG00000010657), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC19361	MGC19361
Mus musculus	RefSeq	ILMN_243531	ILMN_243531	RHOX4D	NM_001039695.1	NM_001039695.1		664610	89242161	NM_001039695.1	Rhox4d	NP_001034784.1	ILMN_2846026	002900193	S	667	CATGCAGACACCTGCGGCCTTCCACCAGCATGTTATTGCATCTCTATTCC	X	+	34933590-34933639	XqA3.3	Mus musculus reproductive homeobox 4D (Rhox4d), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rhox4.4	Rhox4.4
Mus musculus	RefSeq	ILMN_221780	ILMN_250788	RASIP1	NM_028544.1	NM_028544.1		69903	61676214	NM_028544.1	Rasip1	NP_082820.1	ILMN_2740217	005550465	S	2923	CCCGGTGGCTTCGACACCTTGAAAACCAATGAGAAAGGAACGCGCGCAGC	7	+	52894233-52894254:52894255-52894282	7qB4	Mus musculus Ras interacting protein 1 (Rasip1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [evidence ISA]	MGC150078; 2610025P08Rik; AI853551; Rain; 1110025D03Rik	MGC150078; 2610025P08Rik; AI853551; Rain; 1110025D03Rik
Mus musculus	RefSeq	ILMN_252158	ILMN_252158	USP17	NM_001033494.1	NM_001033494.1		436004	75677445	NM_001033494.1	Usp17	NP_001028666.1	ILMN_2885704	005420575	S	1490	CAAGAAACCTGGGCAGAGCCTCAGGAACACGGAAGGTGAACTTGATCTGC	7	-	103124123-103124166:103124224-103124229	7qE3	Mus musculus ubiquitin specific peptidase 17 (homolog) (Usp17), mRNA.				Usp17-3	Usp17-3
Mus musculus	RefSeq	ILMN_236470	ILMN_236470	BC053393	NM_001025435.2	NM_001025435.2		407814	141802650	NM_001025435.2	BC053393	NP_001020606.1	ILMN_3161532	004730133	S	1253	TAGAGATGGCCCCCTGTCCTGCTCAGCTCTGATAGGAGCACTGTGGCGAG	11	+	46401955-46402004	11qB1.1	Mus musculus cDNA sequence BC053393 (BC053393), mRNA.				RP23-248K2.9	RP23-248K2.9
Mus musculus	RefSeq	ILMN_213731	ILMN_213731	3830403N18RIK	NM_027510.2	NM_027510.2		70691	141803393	NM_027510.2	3830403N18Rik	NP_081786.1	ILMN_2640202	001300576	S	956	AATAATTTTCTTGTTTAAATGTAAGAGCCTCTTTATATTAACTTCCAAAT	X	+	53406609-53406658	XqA5	Mus musculus RIKEN cDNA 3830403N18 gene (3830403N18Rik), mRNA.				Xlrl	Xlrl
Mus musculus	Riken	ILMN_204044	ILMN_204044	A830035I23RIK	ri|A830035I23|PX00155E08|AK043810|1010					AK043810	A830035I23Rik		ILMN_1225595	000630349	S	550	TCTGCTCCTTCCCTAGACACTCGGGGTGCTCATGACTCAGTGGAAAGCCG										
Mus musculus	RefSeq	ILMN_214119	ILMN_214119	GMCL1	NM_011818.2	NM_011818.2		23885	31981389	NM_011818.2	Gmcl1	NP_035948.2	ILMN_3009951	001010521	S	2597	TCCTATTAAGCTCAGGACTTTATACCCTCTGAACTGAGTGCCTTTGAGTC	6	-	86642035-86642084	6qD1	Mus musculus germ cell-less homolog 1 (Drosophila) (Gmcl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810049L19Rik; Gcl; mglc-1	2810049L19Rik; Gcl; mglc-1
Mus musculus	RefSeq	ILMN_214119	ILMN_214119	GMCL1	NM_011818.2	NM_011818.2		23885	31981389	NM_011818.2	Gmcl1	NP_035948.2	ILMN_3009948	003870300	S	2445	CTGAGGATATTCCTTCGCCTTACGTGCATGGTCTTGTCTGGCATTCTGTG	6	-	86642187-86642236	6qD1	Mus musculus germ cell-less homolog 1 (Drosophila) (Gmcl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810049L19Rik; Gcl; mglc-1	2810049L19Rik; Gcl; mglc-1
Mus musculus	RefSeq	ILMN_214119	ILMN_214119	GMCL1	NM_011818.2	NM_011818.2		23885	31981389	NM_011818.2	Gmcl1	NP_035948.2	ILMN_1221810	003190148	S	2428	GGGAAATCAGTTTGATTCTGAGGATATTCCTTCGCCTTACGTGCATGGTC	6	-	86642204-86642253	6qD1	Mus musculus germ cell-less homolog 1 (Drosophila) (Gmcl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810049L19Rik; Gcl; mglc-1	2810049L19Rik; Gcl; mglc-1
Mus musculus	RefSeq	ILMN_193274	ILMN_193274	WFIKKN1	XM_128578.5	XM_128578.5		215001	94401812	XM_128578.5	Wfikkn1	XP_128578.4	ILMN_2495669	005960735	S	2387	CCGTGCTGCCAGCGAGAAGCGAGTCAAGAAGATTGTGGAACTGCTCGAGA	17	-	26014672-26014721	17qA3.3	PREDICTED: Mus musculus WAP, FS, Ig, KU, and NTR-containing protein 1 (Wfikkn1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45861] [evidence ISO]	Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of the serine endopeptidase trypsin [goid 30304] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213204	ILMN_213204	POLR1D	NM_009087.1	NM_009087.1		20018	6677790	NM_009087.1	Polr1d	NP_033113.1	ILMN_2680066	004830632	S	64	AAGAGCTTCCATTTCGCCAGCGCCACCTGAGGATTTCCTGGAGCCGCCAC	5	+	147889180-147889229	5qG3	Mus musculus polymerase (RNA) I polypeptide D (Polr1d), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5736] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU018636; MGC107156; 16kDa; mRPA16; 1110003G10Rik; C81327	AU018636; MGC107156; 16kDa; mRPA16; 1110003G10Rik; C81327
Mus musculus	RefSeq	ILMN_213204	ILMN_213204	POLR1D	NM_009087.1	NM_009087.1		20018	6677790	NM_009087.1	Polr1d	NP_033113.1	ILMN_2634720	003420554	S	510	AAAAGGAGCCCACATTCTAGTCCCTCGTGCAGGGTACAAGCAGGACCACC	5	+	147890467-147890486:147890487-147890516	5qG3	Mus musculus polymerase (RNA) I polypeptide D (Polr1d), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5736] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU018636; MGC107156; 16kDa; mRPA16; 1110003G10Rik; C81327	AU018636; MGC107156; 16kDa; mRPA16; 1110003G10Rik; C81327
Mus musculus	RefSeq	ILMN_222712	ILMN_222712	GRIK4	NM_175481.3	NM_175481.3		110637	141802216	NM_175481.3	Grik4	NP_780690.1	ILMN_1232802	004210707	S	3107	GGCGGGAGGGCTAACATTACAAGTTCCTTCTCTCCGGATTCAAGATTCAA	9	-	42328826-42328875	9qA5.1	Mus musculus glutamate receptor, ionotropic, kainate 4 (Grik4), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]	6330551K01Rik; KA1	6330551K01Rik; KA1
Mus musculus	RefSeq	ILMN_221426	ILMN_221426	AW146242	NM_146168.1	NM_146168.1		232023	22122698	NM_146168.1	AW146242	NP_666280.1	ILMN_2735429	001230630	S	2417	AGAAGCACAGTCAGAGCTGCCCCTGGGATTGCATCAGGGAACGGCTGATC	6	-	57702677-57702726	6qB3	Mus musculus expressed sequence AW146242 (AW146242), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_221529	ILMN_331736	LOC100043991	XM_001473698.1	XM_001473698.1		100043991	149263793	XM_001473698.1	LOC100043991	XP_001473748.1	ILMN_1253091	004810392	S	176	CTCCAGACAAGAGGCTGGAGTGGGTCGCAACCATTAGTAGTGGTGGTAGT	12|NT_114985.2	+	940571-940620		PREDICTED: Mus musculus similar to Immunogloblin heavy chain (LOC100043991), mRNA.					
Mus musculus	MEEBO	ILMN_195314	ILMN_195314	BCLAF1	scl0003776.1_5				21706555	BC034300	Bclaf1		ILMN_1221098	001070521	S	17	CACGGCTTATGGTGGATGAGGACAAAAACTTTGGAATAGCAAGCTAACAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISO]		
Mus musculus	RefSeq	ILMN_196867	ILMN_196867	LOC238074	XM_137964.4	XM_137964.4			38049317	XM_137964.4	LOC238074		ILMN_1250590	004850360	S	470	GGAAGCGACAGAGAGAAGAGGAGATCGAAAGTAGCGATTGCTTTTTAGTC										
Mus musculus	RefSeq	ILMN_224678	ILMN_224678	GRIA2	NM_001039195.1	NM_001039195.1		14800	85861219	NM_001039195.1	Gria2	NP_001034284.1	ILMN_3122922	002470403	A	2641	GCGGCAACCTGGATTCCAAAGGCTACGGCATCGCCACACCTAAAGGATCC	3	-	80496214-80496263	3qE3	Mus musculus glutamate receptor, ionotropic, AMPA2 (alpha 2) (Gria2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus [goid 32281] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IDA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	GluR-B; Glur-2; Glur2	GluR-B; Glur-2; Glur2
Mus musculus	RefSeq	ILMN_186776	ILMN_224678	GRIA2	NM_001039195.1	NM_001039195.1		14800	85861219	NM_001039195.1	Gria2	NP_001034284.1	ILMN_1222167	003460241	S	3343	CTGTTACGCTCTACCACCTTACCCAAAGATTCAGATTTTCAGTAACTCGG	3	-	80495512-80495561	3qE3	Mus musculus glutamate receptor, ionotropic, AMPA2 (alpha 2) (Gria2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus [goid 32281] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IDA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	GluR-B; Glur-2; Glur2	GluR-B; Glur-2; Glur2
Mus musculus	Riken	ILMN_202902	ILMN_202902	6530402E24RIK	ri|6530402E24|PX00048H16|AK032644|2639					AK032644	6530402E24Rik		ILMN_2553193	000450541	S	2210	ACCCACTTATGTTAGCTCCATCTGTCTGCAAATAGGAAATTGTCTGCCTC										
Mus musculus	RefSeq	ILMN_224111	ILMN_240659	RNF113A2	NM_025525.2	NM_025525.2		66381	88759340	NM_025525.2	Rnf113a2	NP_079801.2	ILMN_1250750	001440747	S	1122	GCACCCCAGAAGACGCCGATGGGATCTAATTGCCATTACTTAGATGTCCC	12	+	85759271-85759299:85759300-85759320	12qD1	Mus musculus ring finger protein 113A2 (Rnf113a2), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI426758; 2310020H19Rik; Rnf113a; MGC144613	AI426758; 2310020H19Rik; Rnf113a; MGC144613
Mus musculus	RefSeq	ILMN_214309	ILMN_214309	SLC12A6	NM_133649.1	NM_133649.1		107723	41281644	NM_133649.1	Slc12a6	NP_598410.1	ILMN_1213275	004780202	S	171	AGTGAGCCTATGAGCGAACTGTCTGGGGCTACTACTTCTCTGGCAACTGT	2	+	112107146-112107195	2qE3	Mus musculus solute carrier family 12, member 6 (Slc12a6), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KCC3	KCC3
Mus musculus	MEEBO	ILMN_222303	ILMN_222303	2610524B01RIK	scl072195.1_127				51710915	XM_355594	2610524B01Rik		ILMN_2747697	005490736	S	2430	CCCACCACAGCTGCCGGGTACGCAGCATCTGGCTTTGCTTCAGAACAGCT										
Mus musculus	Riken	ILMN_204834	ILMN_204834	A130019H11RIK	ri|A130019H11|PX00121C09|AK037444|1759					AK037444	A130019H11Rik		ILMN_2567962	004850689	S	1540	AGCTCCTTTAGCCTAGACAGGGCCACCACAGCGAGGGAGTCTTAGCTTGG										
Mus musculus	Riken	ILMN_206015	ILMN_206015	B130049M08RIK	ri|B130049M08|PX00158N16|AK045231|989					AK045231	B130049M08Rik		ILMN_1213746	004670315	S	666	ACTAGCTCTGCCCGTTATTGCATTGAGGTGGGGGTCTCTGAACCTGAAGC										
Mus musculus	RefSeq	ILMN_198738	ILMN_261039	GM41	XM_982501.2	XM_982501.2		245502	149271961	XM_982501.2	Gm41	XP_987595.2	ILMN_1242928	006580187	S	729	CACTGAAGATCTAGTGCAGGAAAACTACCTAGAATACCGCCAGGTTCCTG				XqC1	PREDICTED: Mus musculus gene model 41, (NCBI) (Gm41), mRNA.					
Mus musculus	Riken	ILMN_204555	ILMN_204555	B230399H06RIK	ri|B230399H06|PX00162N01|AK046506|919					AK046506	B230399H06Rik		ILMN_1235144	000110612	S	33	TTCCTCGGCCGTGTCTGATGACGTGTTTCACCGGAGGCCTAGTGCGGAAG										
Mus musculus	RefSeq	ILMN_217381	ILMN_217381	PLA2G5	NM_011110.3	NM_011110.3		18784	142387089	NM_011110.3	Pla2g5	NP_035240.2	ILMN_2682574	002900435	S	1568	AGATACAGGGGAGCTGGGGTTCTGAGATGTCACTCAGTGAGAAAAATGGT	4	-	138355472-138355521	4qD3	Mus musculus phospholipase A2, group V (Pla2g5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]	sPLA2; PLA2	sPLA2; PLA2
Mus musculus	RefSeq	ILMN_212332	ILMN_326843	9130230L23RIK	XR_035361.1	XR_035361.1		231253	149253942	XR_035361.1	9130230L23Rik		ILMN_2625233	000160059	S	1334	CCATCTGCTGGGTCTCTTGAATGACGCACTCCTCGTTTGACTTGGGAATG	5	-	66379237-66379286	5qC3.1	PREDICTED: Mus musculus RIKEN cDNA 9130230L23 gene (9130230L23Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_199506	ILMN_199506	LOC383595	XM_357143.1	XM_357143.1			38073658	XM_357143.1	LOC383595		ILMN_2535466	001500176	S	537	GGGCAGATCCTTGGCTGGTGTGGAGAGGAAAGTAAAGGTGCTGTGGACTG										
Mus musculus	RefSeq	ILMN_192822	ILMN_192822	UBAP2	NM_026872.1	NM_026872.1		68926	28076914	NM_026872.1	Ubap2	NP_081148.1	ILMN_2491654	006980639	S	4254	CAGTGAAAGCCTGTCTGCAATCAAAGGCTCCCCCATCCCAGTTGTCCTGA	4	-	41141413-41141462	4qA5	Mus musculus ubiquitin-associated protein 2 (Ubap2), mRNA.				1190005K07Rik; AU045235; AA408600; mKIAA1491	1190005K07Rik; AU045235; AA408600; mKIAA1491
Mus musculus	MEEBO	ILMN_210305	ILMN_210305	CLECSF9	scl28435.4_51	NM_019948.1			9910161	NM_019948.1	Clecsf9		ILMN_1215209	004590458	S	540	GGACTGACAGACCAGGTGGTGGAGGGTCAGTGGCAATGGGTGGATGATAC										
Mus musculus	MEEBO	ILMN_190891	ILMN_190891	C920004C08RIK	scl00319365.1_77						C920004C08Rik		ILMN_1222071	004540477	S	12	CCTGATATGTGCCCATTGCTGAACCTTCATTAGACTCTTTCCTTGTACCC										
Mus musculus	MEEBO	ILMN_216657	ILMN_216657	4930543C13RIK	scl000546.1_271	XM_148909.1			20886776	XM_148909.1	4930543C13Rik		ILMN_1232984	004590411	S	2177	CATTGTTTAAAGAAAAGAGAGGGCGGGAGAAAGCCTAGGAATACCATTGA										
Mus musculus	MEEBO	ILMN_216657	ILMN_216657	4930543C13RIK	scl000546.1_271	XM_148909.1			20886776	XM_148909.1	4930543C13Rik		ILMN_2673739	006020647	S	1982	ATCATACATTATAAATTTGCTTTTATATATCCTAGCTTTGTATCCCACAG										
Mus musculus	MEEBO	ILMN_211856	ILMN_211856	BC031575	scl0223989.1_48				51829947	XM_484525	BC031575		ILMN_1231799	005360022	S	3336	GAGAAGTGCCTGTCATAGATGGAGGGACTTATTTAGAGCTATATGCAGAA										
Mus musculus	RefSeq	ILMN_198260	ILMN_330555	LOC100044390	XM_001472264.1	XM_001472264.1		100044390	149252136	XM_001472264.1	LOC100044390	XP_001472314.1	ILMN_2531045	003800523	S	337	CTGCAAGAGAGCTGGGATTGCCCACAGCCCAAGAATAGAGCATCCTGCAG					PREDICTED: Mus musculus similar to spermatogenesis associated glutamate (E)-rich protein 4d (LOC100044390), mRNA.					
Mus musculus	RefSeq	ILMN_200925	ILMN_257408	EG667190	XR_002058.1	XR_002058.1		667190	94407543	XR_002058.1	EG667190		ILMN_2540489	002650685	S	386	AACCTGGAGGAGTGGATTTTAGAACAGCTCACGCGACTCTATGACTGCCA	X	+	72401376-72401425	XqA7.3	PREDICTED: Mus musculus predicted gene, EG667190 (EG667190), misc RNA.					
Mus musculus	RefSeq	ILMN_199395	ILMN_199395	OLFR1273	NM_146975.1	NM_146975.1		258977	22128976	NM_146975.1	Olfr1273	NP_667186.1	ILMN_2904814	007160519	S	554	CCTGCACTGATACCTTTATGGAAGGTGTTGTTGTGATGGCCAACAGTGGG	2	-	90136413-90136462	2qE1	Mus musculus olfactory receptor 1273 (Olfr1273), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129172; MOR227-4; MGC129173	MGC129172; MOR227-4; MGC129173
Mus musculus	RefSeq	ILMN_199395	ILMN_199395	OLFR1273	NM_146975.1	NM_146975.1		258977	22128976	NM_146975.1	Olfr1273	NP_667186.1	ILMN_2659117	004490241	S	707	CTGTGCCTCACACATCACAGTGGTTATCCTGTTTTTTGGACCTGCCACCT	2	-	90136260-90136309	2qE1	Mus musculus olfactory receptor 1273 (Olfr1273), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129172; MOR227-4; MGC129173	MGC129172; MOR227-4; MGC129173
Mus musculus	RefSeq	ILMN_199395	ILMN_199395	OLFR1273	NM_146975.1	NM_146975.1		258977	22128976	NM_146975.1	Olfr1273	NP_667186.1	ILMN_1236970	007560646	S	177	CCTCAGCTCGTTGTCCATAGTAGAGATTTGCTACTCCTCTACGGTTGTCC	2	-	90136790-90136839	2qE1	Mus musculus olfactory receptor 1273 (Olfr1273), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129172; MOR227-4; MGC129173	MGC129172; MOR227-4; MGC129173
Mus musculus	RefSeq	ILMN_199395	ILMN_199395	OLFR1273	NM_146975.1	NM_146975.1		258977	22128976	NM_146975.1	Olfr1273	NP_667186.1	ILMN_2659119	004050463	S	710	TGCCTCACACATCACAGTGGTTATCCTGTTTTTTGGACCTGCCACCTTCC	2	-	90136257-90136306	2qE1	Mus musculus olfactory receptor 1273 (Olfr1273), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129172; MOR227-4; MGC129173	MGC129172; MOR227-4; MGC129173
Mus musculus	RefSeq	ILMN_223676	ILMN_223676	HOXC10	NM_010462.2	NM_010462.2		209448	46391087	NM_010462.2	Hoxc10	NP_034592.1	ILMN_2836888	004730551	S	1418	TAGAGCACAGTTAGCATTGCTCCTTCCTTGCTGCATTTCCCCCCTTAGAA	15	+	102799505-102799554	15qF3	Mus musculus homeo box C10 (Hoxc10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway [goid 21520] [evidence IGI]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Hox-3.6; AI506621	Hox-3.6; AI506621
Mus musculus	RefSeq	ILMN_223676	ILMN_223676	HOXC10	NM_010462.2	NM_010462.2		209448	46391087	NM_010462.2	Hoxc10	NP_034592.1	ILMN_2836885	004810735	S	1237	TTGGGGTGTTGTGTGTGCCCTCATAGATGGGGTGGTAGTGTGGCCGGTGT	15	+	102799324-102799373	15qF3	Mus musculus homeo box C10 (Hoxc10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway [goid 21520] [evidence IGI]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Hox-3.6; AI506621	Hox-3.6; AI506621
Mus musculus	RefSeq	ILMN_200898	ILMN_223668	MAGEH1	NM_023788.3	NM_023788.3		75625	124244089	NM_023788.3	Mageh1	NP_076277.1	ILMN_1234322	001300377	S	47	TGCGCAAGTCAGCTTGCCTGGGAAAGGGCTTTGTGGCTGAAAGCGACTGG	X	-	149472010-149472059	XqF3	Mus musculus melanoma antigen, family H, 1 (Mageh1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	APR-1; 2010107K23Rik; APR1	APR-1; 2010107K23Rik; APR1
Mus musculus	RefSeq	ILMN_223668	ILMN_223668	MAGEH1	NM_023788.3	NM_023788.3		75625	124244089	NM_023788.3	Mageh1	NP_076277.1	ILMN_2996941	004830139	S	971	GGTTGTGGAGGGTGGGGAGGGCACTGTATTTGGTATTTGTGACCAGTGCT	X	-	149471086-149471135	XqF3	Mus musculus melanoma antigen, family H, 1 (Mageh1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	APR-1; 2010107K23Rik; APR1	APR-1; 2010107K23Rik; APR1
Mus musculus	MEEBO	ILMN_186682	ILMN_186682	GRM7	scl29661.2_76				51716979	XM_144986	Grm7		ILMN_2437608	006560735	S	20	CAGAGTTTTCTGTGAGATCAGGAGCCACCTTGTTGCTACTCCAATTTCCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane portion of the presynaptic active zone; it is the site where docking and fusion of synaptic vesicles occurs for the release of neurotransmitters [goid 48787] [evidence TAS]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus [goid 1661] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information received a short time (up to about 30 minutes) ago. This type of memory is typically dependent on direct, transient effects of second messenger activation [goid 7614] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; A change in state or activity of a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 33555] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5246] [evidence IDA]; A G-protein coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity [goid 1642] [evidence TAS]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence TAS]		
Mus musculus	MEEBO	ILMN_186682	ILMN_186682	GRM7	scl29661.2_76				51716979	XM_144986	Grm7		ILMN_2684189	000770152	S	4113	CCACTCGGAATGTCAACAGAGGAGATTCTATGGTGCGATGGGAGGAGGAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane portion of the presynaptic active zone; it is the site where docking and fusion of synaptic vesicles occurs for the release of neurotransmitters [goid 48787] [evidence TAS]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus [goid 1661] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information received a short time (up to about 30 minutes) ago. This type of memory is typically dependent on direct, transient effects of second messenger activation [goid 7614] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; A change in state or activity of a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 33555] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5246] [evidence IDA]; A G-protein coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity [goid 1642] [evidence TAS]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence TAS]		
Mus musculus	RefSeq	ILMN_219628	ILMN_219628	BCHE	NM_009738.3	NM_009738.3		12038	124487349	NM_009738.3	Bche	NP_033868.3	ILMN_1235621	002760327	S	1726	GGGAAGAAGAGTTAATTATACGAGAGCTGAGGAAATCTTTAGTCGATCCA	3	-	73504527-73504576	3qE3	Mus musculus butyrylcholinesterase (Bche), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion [goid 4104] [evidence IEA]	C730038G20Rik; MGC107651	C730038G20Rik; MGC107651
Mus musculus	RefSeq	ILMN_193896	ILMN_260547	2300002D11RIK	NM_001081156.2	NM_001081156.2		69539	144922651	NM_001081156.2	2300002D11Rik	NP_001074625.1	ILMN_1253600	004560193	S	1380	TCCCCCCTGTGAGTGAGGACATGCCTGTAGCCCCTTGCAGACAATCAGCT	4	-	133047239-133047288	4qD2.3	Mus musculus RIKEN cDNA 2300002D11 gene (2300002D11Rik), mRNA.				MGC57108	MGC57108
Mus musculus	RefSeq	ILMN_223140	ILMN_223140	PGBD5	NM_171824.2	NM_171824.2		209966	67782366	NM_171824.2	Pgbd5	NP_741958.1	ILMN_1253467	006580484	S	1591	GGCTCAAGTTCAGACCAGGCAAGCTTACAAAATGGACCCCTCGGTGCCAC	8	-	126894132-126894181	8qE2	Mus musculus piggyBac transposable element derived 5 (Pgbd5), mRNA.				2900019M05Rik; AI854313	2900019M05Rik; AI854313
Mus musculus	MEEBO	ILMN_192479	ILMN_192479	9627521_3631_RC	9627521_3631_rc						9627521_3631_rc		ILMN_1246688	004280706	S	9	AATCAGGTAGTTCGCTACAGAACACAGATCTTTTCAAATGCATGTTAGCG										
Mus musculus	RefSeq	ILMN_197039	ILMN_197039	LOC217786	XM_138194.3	XM_138194.3			38073623	XM_138194.3	LOC217786		ILMN_2526686	006100544	S	917	TGCAAAACACCAGAGGAGACATCCAGACCCTGGACAACGGTCAATGGCTC										
Mus musculus	RefSeq	ILMN_201313	ILMN_201313	LOC382418	XM_356495.1	XM_356495.1			38090758	XM_356495.1	LOC382418		ILMN_1245368	001240327	S	378	TTCCACAAGCCAGTTGCTAACCCTGCCACTCAATCCCCAGCCACCTGCTG										
Mus musculus	MEEBO	ILMN_192959	ILMN_192959	2010110K16RIK	scl35236.4_464				27754059	NM_026442	2010110K16Rik		ILMN_2492936	004850358	S	17	GGGAGGAACTGTGGTAAGTTTCTCTTTTAGTGTGTTACCCTAGTCTGAGC										
Mus musculus	RefSeq	ILMN_200422	ILMN_200422	LOC384273	XM_357532.1	XM_357532.1			38081782	XM_357532.1	LOC384273		ILMN_1257851	001500703	S	11	TCCTCGTTTCCCACACAGATTCCGAAAACCCTTCCACCACGATCACGGCG										
Mus musculus	MEEBO	ILMN_208834	ILMN_208834	5730502D15RIK	scl47628.10.7_51	NM_026485.1			21312671	NM_026485.1	5730502D15Rik		ILMN_1249439	004210541	S	838	TGGGGAGTTTCCTGACCTGCATCGCACCATTGTCTCAGAGCGTGACGTCT										
Mus musculus	RefSeq	ILMN_184595	ILMN_226485	MALT1	NM_172833.2	NM_172833.2		240354	118129950	NM_172833.2	Malt1	NP_766421.1	ILMN_1216818	003830040	S	4886	GTGTAGCAACCCAGAGCAGCAGAACACTTTCTTTTCATTGGGATTATAGT	18	+	65638324-65638373	18qE1	Mus musculus mucosa associated lymphoid tissue lymphoma translocation gene 1 (Malt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50856] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; The process whereby a hemopoietic stem cell acquires the specialized features of a B-1 B cell. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity [goid 1923] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus [goid 9620] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence RCA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [pmid 16831874] [evidence IEP]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 16831874] [evidence IEP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC124469; A630046N12; MGC124470; D430033E09Rik	MGC124469; A630046N12; MGC124470; D430033E09Rik
Mus musculus	MEEBO	ILMN_217740	ILMN_217740	KRT1-12	scl00268482.1_212	NM_010661.1			7110666	NM_010661.1	Krt1-12		ILMN_2687011	003190544	S	1680	TGCTGGTCTTCTATTGAACCCCAGATCACCTTACACCTTCCTGGGCCTGA										
Mus musculus	RefSeq	ILMN_212034	ILMN_212034	A630005I04RIK	NM_177248.3	NM_177248.3		320743	142366304	NM_177248.3	A630005I04Rik	NP_796222.1	ILMN_1243097	002940241	S	3412	GACTTCAGTCTGGAGATTAGAAGAAAGTTAGGTACTGTGAATGGTGCCCC	7	+	120386679-120386728	7qF1	Mus musculus RIKEN cDNA A630005I04 gene (A630005I04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198421	ILMN_245603	GM765	XM_916337.2	XM_916337.2		330390	94377782	XM_916337.2	Gm765	XP_921430.1	ILMN_1251998	004810202	S	529	CTCTGCCTCCGATGAGAACCATCCACACAATGACTGCAACTTGACCTGCG				6qD3	PREDICTED: Mus musculus gene model 765, (NCBI) (Gm765), mRNA.					
Mus musculus	RefSeq	ILMN_218793	ILMN_218793	LYNX1	NM_011838.4	NM_011838.4		23936	146134470	NM_011838.4	Lynx1	NP_035968.1	ILMN_1256369	004640082	S	3885	CACCTATATGCCAGGGTGGTCCCTTTCAATGTCTGTCCCCCATTGGATGA				15qD3	Mus musculus Ly6/neurotoxin 1 (Lynx1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IC ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is decreased [goid 30550] [evidence IDA];  [goid 8200] [evidence IDA]	AI838844	AI838844
Mus musculus	RefSeq	ILMN_218793	ILMN_218793	LYNX1	NM_011838.4	NM_011838.4		23936	146134470	NM_011838.4	Lynx1	NP_035968.1	ILMN_1258942	003370471	S	18	GCGATGCGGTACCAACACCGCACGAAGTGTGTACAGATTCCCAGTTAGAC				15qD3	Mus musculus Ly6/neurotoxin 1 (Lynx1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IC ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is decreased [goid 30550] [evidence IDA];  [goid 8200] [evidence IDA]	AI838844	AI838844
Mus musculus	Riken	ILMN_204867	ILMN_204867	A130096D12RIK	ri|A130096D12|PX00125N12|AK038332|2055					AK038332	A130096D12Rik		ILMN_1245788	004880241	S	1656	CGCTAGGGCACCCCAGGCATTTTTGGAAAGTGTATGCACATCATGCACAG										
Mus musculus	RefSeq	ILMN_211990	ILMN_236247	LOC668549	XM_001002191.1	XM_001002191.1		668549	94393314	XM_001002191.1	LOC668549	XP_001002191.1	ILMN_2621519	003460402	S	226	CCTGGACGAGGCCTTGAGTGGATTGGAAGGATTGATCCTAATAGTGGTGG	12	-	115908930-115908979	12qF2	PREDICTED: Mus musculus similar to Ig heavy chain V region 145 precursor (LOC668549), mRNA.					
Mus musculus	RefSeq	ILMN_211990	ILMN_236247	LOC668549	XM_001002191.1	XM_001002191.1		668549	94393314	XM_001002191.1	LOC668549	XP_001002191.1	ILMN_1239079	005870544	S	234	AGGCCTTGAGTGGATTGGAAGGATTGATCCTAATAGTGGTGGTACTAAGT	12	-	115908922-115908971	12qF2	PREDICTED: Mus musculus similar to Ig heavy chain V region 145 precursor (LOC668549), mRNA.					
Mus musculus	RefSeq	ILMN_219153	ILMN_219153	DCP2	XM_140308.6	XM_140308.6		70640	94404430	XM_140308.6	Dcp2	XP_140308.6	ILMN_2704951	005290554	S	1067	AGCCACTGCAGCAGAAGTCACACAGTAACCACGGGGAGGTGTCGGACCTT	18	+	44569911-44569960	18qB3	PREDICTED: Mus musculus DCP2 decapping enzyme homolog (S. cerevisiae) (Dcp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_212027	ILMN_212027	1700023M03RIK	scl069435.3_112	NM_027078.1			21630262	NM_027078.1	1700023M03Rik		ILMN_2621909	005490670	S	922	GCGTTTGGAACCACTGGTAGATGACCTAACACTTCGCATTGGGAGACTAG										
Mus musculus	MEEBO	ILMN_185221	ILMN_185221	TUBGCP6	scl46860.11.1_1						Tubgcp6		ILMN_2425185	000290056	S	12	GAAATTGCGAAACAAGAACTAATTGTCCATGCCCGGGAAGCCGCGTCCAG										
Mus musculus	RefSeq	ILMN_200912	ILMN_200912	LOC385462	XM_358242.1	XM_358242.1			38086986	XM_358242.1	LOC385462		ILMN_2540438	004390044	S	421	CACACTGGCCGGCAATGGCAGCAGCTTTCCAGGGGCTTTCCCCATTTCAA										
Mus musculus	Riken	ILMN_203906	ILMN_203906	9630002P13RIK	ri|9630002P13|PX00114D15|AK035769|3477					AK035769	9630002P13Rik		ILMN_2560883	002070259	S	2966	CAAGTGTCCGTGTTTTCCTGTAGCTAGCAGAACTCTGGGTCCTTCCCGCT										
Mus musculus	RefSeq	ILMN_222669	ILMN_222669	CYP3A11	NM_007818.3	NM_007818.3		13112	118131163	NM_007818.3	Cyp3a11	NP_031844.1	ILMN_2753183	007320431	S	1074	GCAGGATGAGATCGATGAGGCTCTGCCCAACAAGGCACCTCCCACGTATG	5	-	146672098-146672114:146673923-146673955	5qG2	Mus musculus cytochrome P450, family 3, subfamily a, polypeptide 11 (Cyp3a11), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	IIIAm1; AI256190; Cyp3a; Pcn	IIIAm1; AI256190; Cyp3a; Pcn
Mus musculus	RefSeq	ILMN_220222	ILMN_220222	MFN1	NM_024200.2	NM_024200.2		67414	31340595	NM_024200.2	Mfn1	NP_077162.1	ILMN_2950837	005720010	S	2882	GGGGGGTCCTGCAATCACTCTGTCCTCACAGCAAGGATGTAACCACTACT	3	+	32769129-32769178	3qA3	Mus musculus mitofusin 1 (Mfn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310002F04Rik; 6330416C07Rik; KIAA4032; HR2; mKIAA4032; D3Ertd265e	2310002F04Rik; 6330416C07Rik; KIAA4032; HR2; mKIAA4032; D3Ertd265e
Mus musculus	RefSeq	ILMN_220222	ILMN_220222	MFN1	NM_024200.2	NM_024200.2		67414	31340595	NM_024200.2	Mfn1	NP_077162.1	ILMN_2719296	001850706	S	2884	GGGTCCTGCAATCACTCTGTCCTCACAGCAAGGATGTAACCACTACTAAA	3	+	32769131-32769180	3qA3	Mus musculus mitofusin 1 (Mfn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310002F04Rik; 6330416C07Rik; KIAA4032; HR2; mKIAA4032; D3Ertd265e	2310002F04Rik; 6330416C07Rik; KIAA4032; HR2; mKIAA4032; D3Ertd265e
Mus musculus	RefSeq	ILMN_213208	ILMN_229487	TXNL4A	NM_001042408.1	NM_001042408.1		27366	109255213	NM_001042408.1	Txnl4a	NP_001035867.1	ILMN_2634749	000670348	S	1284	CTGCCGTGCAGCCCTTTCTTGGCTTCTCCACGCTGCCGTCACATGCTGCT	18	+	80409096-80409145	18qE3	Mus musculus thioredoxin-like 4A (Txnl4a), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Ribonucleoprotein complex containing small nuclear RNA U5; a component of both the major and minor spliceosome complexes [goid 5682] [evidence TAS]; Ribonucleoprotein complex containing small nuclear RNA U5; a component of both the major and minor spliceosome complexes [goid 5682] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	U5-15kDa; U5-15kD; D18Wsu98e; Dim1	U5-15kDa; U5-15kD; D18Wsu98e; Dim1
Mus musculus	RefSeq	ILMN_219110	ILMN_219110	CBX7	NM_144811.3	NM_144811.3		52609	115270984	NM_144811.3	Cbx7	NP_659060.1	ILMN_2947234	000830598	S	2524	GATGGTGATCTTATTGCCAAGTTCCTTCCACCTCCTGCCTACCGAGGAAG	15	-	79746556-79746605	15qE1	Mus musculus chromobox homolog 7 (Cbx7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	AI851678; D15Ertd417e; 1600014J01Rik	AI851678; D15Ertd417e; 1600014J01Rik
Mus musculus	MEEBO	ILMN_192709	ILMN_192709	1700112D23RIK	scl22301.3.1_4						1700112D23Rik		ILMN_2490580	002470706	S	2	ACTTCTGACCTACTGAAAGCTACAACTGCAAACATATGCACTGAGTGTCA										
Mus musculus	RefSeq	ILMN_223671	ILMN_236398	KLHDC8B	NM_030075.1	NM_030075.1		78267	58037522	NM_030075.1	Klhdc8b	NP_084351.1	ILMN_1216669	001940040	S	2420	CTGAGTTACCGCCTCAGGAGCTTGGGTTGGGGAGCCTTTGTCTTTAGCAT	9	-	108350453-108350502	9qF2	Mus musculus kelch domain containing 8B (Klhdc8b), mRNA.				4931406O17Rik	4931406O17Rik
Mus musculus	RefSeq	ILMN_236398	ILMN_236398	KLHDC8B	NM_030075.1	NM_030075.1		78267	58037522	NM_030075.1	Klhdc8b	NP_084351.1	ILMN_2959360	006370386	S	2723	CACAGAAGAAACAAAGGAGAGAATGTGGGGACTGCCAGGGGGGCCAGTGG	9	-	108350150-108350199	9qF2	Mus musculus kelch domain containing 8B (Klhdc8b), mRNA.				4931406O17Rik	4931406O17Rik
Mus musculus	RefSeq	ILMN_212003	ILMN_212003	ELF3	NM_007921.1	NM_007921.1		13710	6679628	NM_007921.1	Elf3	NP_031947.1	ILMN_2850233	002510369	S	1777	GCCCCCTAACTGGACCAGCGAGAAGTAGGGTGATTCCAGGACCCCCTCTT	1	-	137070064-137070113	1qE4	Mus musculus E74-like factor 3 (Elf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The tissue remodeling that removes differentiated mammary epithelia during weaning [goid 60056] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	jen; ESX; ESE-1	jen; ESX; ESE-1
Mus musculus	RefSeq	ILMN_222235	ILMN_222235	NLN	NM_029447.1	NM_029447.1		75805	28077050	NM_029447.1	Nln	NP_083723.1	ILMN_2756113	001980324	S	3823	GGCTGGGCATCAAACCTCCGGCTTCTTCACCCATGCTAGCAAGTGCTATG	13	-	104813387-104813436	13qD1	Mus musculus neurolysin (metallopeptidase M3 family) (Nln), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	C79345; 4930472G13Rik	C79345; 4930472G13Rik
Mus musculus	RefSeq	ILMN_222235	ILMN_222235	NLN	NM_029447.1	NM_029447.1		75805	28077050	NM_029447.1	Nln	NP_083723.1	ILMN_2786567	005670112	S	3664	CCTGGCAGGAAACGAAATTAGAGCCTGTCTGTTCTTTAGACCCGGTGGAC	13	-	104813546-104813595	13qD1	Mus musculus neurolysin (metallopeptidase M3 family) (Nln), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	C79345; 4930472G13Rik	C79345; 4930472G13Rik
Mus musculus	RefSeq	ILMN_198469	ILMN_198469	LOC329055	XM_285300.2	XM_285300.2			38085331	XM_285300.2	LOC329055		ILMN_1244559	001110053	S	2212	CTTAGGAAATATGAAGCACGCACCAGGGGTACCTATGGGGAAAACCCATG										
Mus musculus	Riken	ILMN_205033	ILMN_205033	A430070A22RIK	ri|A430070A22|PX00138M21|AK040147|2230					AK040147	A430070A22Rik		ILMN_1224240	000610102	S	2031	GTAGCCGGCCTTCAGATACCCAAGACAGCACAGAATTTCCGAGACCCTGC										
Mus musculus	MEEBO	ILMN_219107	ILMN_219107	4833408A19RIK	scl53437.1.1_12	NM_175203.2			31340814	NM_175203.2	4833408A19Rik		ILMN_2704395	002710537	S	623	CCTCCCTCAGCCTTATTCCACCAGACTACCGAGAGGACTTCAACCTGGCC										
Mus musculus	RefSeq	ILMN_216405	ILMN_238484	C530008M17RIK	XM_916109.2	XM_916109.2		320827	94374597	XM_916109.2	C530008M17Rik	XP_921202.2	ILMN_2670775	005310601	S	6152	CCTGCACTAAATACCAATCGAGTGTTATTCTGCCTATTTCTGTGTTGTGC				5qC3.3	PREDICTED: Mus musculus RIKEN cDNA C530008M17 gene, transcript variant 3 (C530008M17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215000	ILMN_215000	ANXA10	NM_011922.2	NM_011922.2		26359	145966869	NM_011922.2	Anxa10	NP_036052.2	ILMN_2654364	006650220	S	1158	GAAATGTGTAATCCTAGATTTGTAGCCCTTATTCAATTAGTAATCAATTA				8qB3.1	Mus musculus annexin A10 (Anxa10), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC159022	MGC159022
Mus musculus	RefSeq	ILMN_228245	ILMN_228245	OTTMUSG00000002196	NM_001013823.1	NM_001013823.1		435285	62000679	NM_001013823.1	OTTMUSG00000002196	NP_001013845.1	ILMN_3160339	006110209	S	626	GTGGCCCCTCTTGCTAAATTTCCTCTCTAACTACCAATCCCGAGGCAGCC	11	-	99712244-99712277:99712278-99712293	11qD	Mus musculus predicted gene, OTTMUSG00000002196 (OTTMUSG00000002196), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_244122	ILMN_244122	CAMK2D	NM_001025439.1	NM_001025439.1		108058	70906478	NM_001025439.1	Camk2d	NP_001020610.1	ILMN_3070701	000940543	I	1499	TACCCCGGCGCTGGAGCCCCAAACTACTGTAATCCACAACCCTGACGGAA	3	+	126508822-126508834:126511126-126511162	3qG1-qG2	Mus musculus calcium/calmodulin-dependent protein kinase II, delta (Camk2d), transcript variant 1, mRNA.	Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII
Mus musculus	RefSeq	ILMN_187701	ILMN_244122	CAMK2D	NM_001025439.1	NM_001025439.1		108058	70906478	NM_001025439.1	Camk2d	NP_001020610.1	ILMN_2446383	001470048	S	830	GGAGGCTGTGCTACACTGCCATCAGATGGGCGTAGTCCATCGGGACCTAA	3	+	126474713-126474762	3qG1-qG2	Mus musculus calcium/calmodulin-dependent protein kinase II, delta (Camk2d), transcript variant 1, mRNA.	Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII
Mus musculus	RefSeq	ILMN_221635	ILMN_221635	LHX5	NM_008499.4	NM_008499.4		16873	145966688	NM_008499.4	Lhx5	NP_032525.1	ILMN_1220665	002370274	S	2359	TGCCCGGGACCTGGAGGCTGGGCCATCAGGACGAACAGTATTATACTTTT				5qF	Mus musculus LIM homeobox protein 5 (Lhx5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IGI]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IGI]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IGI]; The process that mediates the transfer of information from Purkinje cells to granule cell precursors resulting in an increase in rate of granule cell precursor cell proliferation [goid 21937] [evidence IGI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Lim2	Lim2
Mus musculus	RefSeq	ILMN_197549	ILMN_224326	LOC639609	XM_916115.3	XM_916115.3		639609	149251091	XM_916115.3	LOC639609	XP_921208.2	ILMN_1253006	007200561	S	1053	CACACGACTCAGAAAGGTTGGAGTTCCCATCATCCATGACCATGTAGAGG					PREDICTED: Mus musculus similar to arylacetamide deacetylase-like 2 (LOC639609), mRNA.					
Mus musculus	RefSeq	ILMN_201351	ILMN_201351	LOC382511	XM_356541.1	XM_356541.1			38091605	XM_356541.1	LOC382511		ILMN_1240166	002230608	S	540	TTGGAAGGTGGAGACAGGTTATACCGGCGTAGCTGATCTTTGGGATCTTG										
Mus musculus	RefSeq	ILMN_196649	ILMN_232763	AU022252	NM_001012400.1	NM_001012400.1		230696	59958367	NM_001012400.1	AU022252	NP_001012400.1	ILMN_1249278	004390719	S	301	CAGCATTTGCAGGAACAAGCCAGGAAGGTGCTGGAGGATGCTCGCCGAGA	4	-	118899514-118899537:118900632-118900657	4qD2.1	Mus musculus expressed sequence AU022252 (AU022252), mRNA.				RP23-344D2.9; MGC107672	RP23-344D2.9; MGC107672
Mus musculus	RefSeq	ILMN_232763	ILMN_232763	AU022252	NM_001012400.1	NM_001012400.1		230696	59958367	NM_001012400.1	AU022252	NP_001012400.1	ILMN_2893437	006110246	S	466	GGAACAGGCTGTCCCCATGACTTCCTTGGTGCCTACAAGCTGCAACATGA	4	-	118899076-118899125	4qD2.1	Mus musculus expressed sequence AU022252 (AU022252), mRNA.				RP23-344D2.9; MGC107672	RP23-344D2.9; MGC107672
Mus musculus	Riken	ILMN_203070	ILMN_203070	C330015L04RIK	ri|C330015L04|PX00076G12|AK049236|1816					AK049236	C330015L04Rik		ILMN_1214565	006480246	S	1430	TGCCTTGCTTTGACAGGTGAGCAGGCTGTATCCGATGGGCGGACTCTTCG										
Mus musculus	RefSeq	ILMN_201455	ILMN_201455	LOC382171	XM_356272.1	XM_356272.1			38093972	XM_356272.1	LOC382171		ILMN_1254713	006900608	S	29	TTTTTAAGGCTGCTGTGGTACCATCGGCCCAAACCCTTAAAATTACCGAC										
Mus musculus	Riken	ILMN_202440	ILMN_202440	PSEN2	ri|4833416A15|PX00028E16|AK014706|1998					AK014706	Psen2		ILMN_1213684	000510066	S	1846	CAGAAGGTGGCAGGTGCTCTGTTGAAGACAAGGGAGGGCTAGAGGTCAAG						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IMP]; The process whereby precursor cell type acquires the specialized features of a hemopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells [goid 2244] [evidence IGI]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage [goid 2573] [evidence IGI]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response [goid 2286] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IGI]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IGI]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IGI]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IGI]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IGI]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IDA]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IGI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196777	ILMN_196777	IFITM3	NM_025378.2	NM_025378.2		66141	142365531	NM_025378.2	Ifitm3	NP_079654.1	ILMN_2658501	003840292	S	502	CTTCACACTTAATAGAGGATTCCGACTTCCGGTCCTGAAGTGCTTCACCC	7	-	148195585-148195623:148195624-148195634	7qF5	Mus musculus interferon induced transmembrane protein 3 (Ifitm3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]		mil-1; 1110004C05Rik; Cdw217; Fgls; IP15; Cd225	mil-1; 1110004C05Rik; Cdw217; Fgls; IP15; Cd225
Mus musculus	RefSeq	ILMN_240017	ILMN_240017	CCL21C	NM_023052.1	NM_023052.1		65956	14547894	NM_023052.1	Ccl21c	NP_075539.1	ILMN_2969845	004230315	S	442	AGTAGCCCGCCTGGAGCCCAGGAGATCCCCCACGAACTTCAAGCTGGGTG	4	+	42016586-42016635	4qA5	Mus musculus chemokine (C-C motif) ligand 21c (leucine) (Ccl21c), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TCA4; SLC; exodus-2; Scya21c; CKb9	TCA4; SLC; exodus-2; Scya21c; CKb9
Mus musculus	MEEBO	ILMN_188314	ILMN_188314	9626978_151	9626978_151						9626978_151		ILMN_1216516	004730300	S	1	TCTCCGTAGAGCCCTAAAAGTAAAGGGAGCATCCAGTCAGGGGCTGATCT										
Mus musculus	RefSeq	ILMN_197681	ILMN_197681	LOC223526	XM_122867.2	XM_122867.2			38077309	XM_122867.2	LOC223526		ILMN_2528986	006270324	S	371	TTTCTACAGAAACCATGCCCATCAAGAGTAACCTAATAGCTCCACCCAGG										
Mus musculus	RefSeq	ILMN_218175	ILMN_256339	SIDT1	NM_198034.2	NM_198034.2		320007	51036632	NM_198034.2	Sidt1	NP_932151.2	ILMN_1248211	000870156	S	3849	GGTCATGACTAATCACCTCTTACAGGATCCCATTCTCTGTTCCCAGGAGG	16	-	44240645-44240694	16qB4	Mus musculus SID1 transmembrane family, member 1 (Sidt1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			B830021E24Rik; AW045928	B830021E24Rik; AW045928
Mus musculus	RefSeq	ILMN_223104	ILMN_223104	SLC25A16	NM_175194.2	NM_175194.2		73132	31340837	NM_175194.2	Slc25a16	NP_780403.1	ILMN_2822071	003190242	S	2691	TGTAAGCATGACCCATGGAGTAGAAGCATCAAGCCTTCTCTAGAGGTAGT	10	+	62408792-62408841	10qB4	Mus musculus solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16 (Slc25a16), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	ML7; GDA; GDC; HGT.1; 3110021G18Rik	ML7; GDA; GDC; HGT.1; 3110021G18Rik
Mus musculus	RefSeq	ILMN_212943	ILMN_212943	THBS4	NM_011582.2	NM_011582.2		21828	142345557	NM_011582.2	Thbs4	NP_035712.1	ILMN_2631882	002100053	S	3076	ACCAGCCCAAATACGTCAAAACTTTTTATATGAATGTGGAAATAAAGAAG	13	-	93521557-93521606	13qC3	Mus musculus thrombospondin 4 (Thbs4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	TSP-4	TSP-4
Mus musculus	RefSeq	ILMN_191573	ILMN_212009	RGS3	NM_134257.2	NM_134257.2		50780	126032320	NM_134257.2	Rgs3	NP_599018.2	ILMN_1228100	006840192	S	1206	GAGAACATCGCCAAGCAGCAACAGCTGGCCGCACCACCTACAGAGAGGAA	4	+	62313820-62313869	4qB3	Mus musculus regulator of G-protein signaling 3 (Rgs3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	C2PA-RGS3; PDZ-RGS3; RGS3S; 4930506N09Rik; C2pa	C2PA-RGS3; PDZ-RGS3; RGS3S; 4930506N09Rik; C2pa
Mus musculus	RefSeq	ILMN_212009	ILMN_212009	RGS3	NM_134257.2	NM_134257.2		50780	126032320	NM_134257.2	Rgs3	NP_599018.2	ILMN_1239208	004560114	S	2774	GAAGGACTCTTACCCTCGCTTCCTCCGCTCTGACCTCTACCTGGACCTCA	4	+	62363198-62363247	4qB3	Mus musculus regulator of G-protein signaling 3 (Rgs3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	C2PA-RGS3; PDZ-RGS3; RGS3S; 4930506N09Rik; C2pa	C2PA-RGS3; PDZ-RGS3; RGS3S; 4930506N09Rik; C2pa
Mus musculus	RefSeq	ILMN_189442	ILMN_230548	ZMYND15	NM_001029929.2	NM_001029929.2		574428	142365130	NM_001029929.2	Zmynd15	NP_001025100.1	ILMN_2461299	000430019	S	2562	AGGCGGCACAGTCCGCTCGGCTCCCGGCCCTGCACCTAGACCCCCAACTC	11	+	70276559-70276608	11qB3	Mus musculus zinc finger, MYND-type containing 15 (Zmynd15), mRNA.					
Mus musculus	RefSeq	ILMN_196745	ILMN_196745	HMGB1	NM_010439.3	NM_010439.3		15289	114326547	NM_010439.3	Hmgb1	NP_034569.1	ILMN_1242911	001690132	S	1998	ATATTAGTACCATTTGTCCAATACATTTGCTTTTTCTTTATAAAACCCAA	5	-	149859065-149859114	5qG3	Mus musculus high mobility group box 1 (Hmgb1), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IDA]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IDA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Modulates the activity of nitric oxide synthase [goid 30235] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC103168; Hmg1; MGC117897; MGC103169; MGC117896	MGC103168; Hmg1; MGC117897; MGC103169; MGC117896
Mus musculus	RefSeq	ILMN_218737	ILMN_218737	SLC34A2	NM_011402.2	NM_011402.2		20531	66793410	NM_011402.2	Slc34a2	NP_035532.2	ILMN_2699611	003420162	S	3939	GTAGTTAATGAATGTTACCAGGTTTGGAAGCAAAGACTCGGGTGGAATCT	5	+	53462696-53462745	5qC1	Mus musculus solute carrier family 34 (sodium phosphate), member 2 (Slc34a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA];  [goid 15321] [evidence IEA]	D5Ertd227e; AA536683; Npt2b; NaPi-2b	D5Ertd227e; AA536683; Npt2b; NaPi-2b
Mus musculus	RefSeq	ILMN_216431	ILMN_216431	OLFR1264	NM_021368.1	NM_021368.1		258206	11496248	NM_021368.1	Olfr1264	NP_067343.1	ILMN_2671035	006510332	S	743	TCTTTGTGCCCTGTATATTTAGTTATATGCGTCCATCGACTACTTTACCT	2	-	89861429-89861478	2qE1	Mus musculus olfactory receptor 1264 (Olfr1264), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Ors16; Mor16; MOR236-1	Ors16; Mor16; MOR236-1
Mus musculus	RefSeq	ILMN_216217	ILMN_216217	CADM2	NM_178721.2	NM_178721.2		239857	31341299	NM_178721.2	Cadm2	NP_848836.1	ILMN_2805442	007330441	S	1597	GCAGTGCCGAGTATGTCCTCATTGTTCACGATCCCAATTCTCTGGCTGGC	16	-	66582745-66582766:66665459-66665486	16qC1.3-qC2	Mus musculus cell adhesion molecule 2 (Cadm2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Igdf4d; SynCAM2; NECL3; 9330131D06; Igsf4d; A830029E02Rik	Igdf4d; SynCAM2; NECL3; 9330131D06; Igsf4d; A830029E02Rik
Mus musculus	RefSeq	ILMN_221815	ILMN_221815	BC023179	NM_145577.2	NM_145577.2		232855	110625909	NM_145577.2	BC023179	NP_663552.2	ILMN_1225710	007210414	S	1132	GTGGCAAAGCATTTAAGGAGAAATCCAGCCTCATTTATCATGCGCGAGTG	7	-	7156423-7156472	7qA1	Mus musculus cDNA sequence BC023179 (BC023179), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC37070; MGC118009	MGC37070; MGC118009
Mus musculus	MEEBO	ILMN_189869	ILMN_189869	WBSCR22	scl0004087.1_8	NM_025375.1			13384747	NM_025375.1	Wbscr22		ILMN_2478874	004560433	S	2	GGACCTGCCTCTGGGGAATTCTCTGGACTGAACTGTTTACCTCAGCAGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200335	ILMN_200335	LOC386256	XM_359142.1	XM_359142.1			38081340	XM_359142.1	LOC386256		ILMN_1252983	006180520	S	221	CCAACACTGTCACCTCAGCCAGTCCTGGGCACCCCAACATACCCAAAAAG										
Mus musculus	RefSeq	ILMN_213611	ILMN_213611	CLEC14A	NM_025809.4	NM_025809.4		66864	142385728	NM_025809.4	Clec14a	NP_080085.3	ILMN_1256550	000830653	S	3684	GGTGGTCACCTCCAGAAATTGTTTCAATGGCAGAATAAGGTCAGTTAAGT	12	-	59366142-59366191	12qC1	Mus musculus C-type lectin domain family 14, member a (Clec14a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1200003C23Rik; AI642649	1200003C23Rik; AI642649
Mus musculus	RefSeq	ILMN_185715	ILMN_185715	V1RE6	NM_134195.2	NM_134195.2		171229	117168260	NM_134195.2	V1re6	NP_598956.2	ILMN_1227431	003400008	S	643	TTGTATATAGCATTTTGTATGTTTCCTGAAGTCTTACTTTCTATACTCCT	17	+	20872706-20872755	17qA3.2	Mus musculus vomeronasal 1 receptor, E6 (V1re6), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	Riken	ILMN_203656	ILMN_203656	9430022P05RIK	ri|9430022P05|PX00108K03|AK034671|2396					AK034671	9430022P05Rik		ILMN_1220712	006940605	S	2185	GTGTGAGCAAGCAGTTGTCTCAGCCAGTTTCTCTTCCTGGCAGGCTGCAG										
Mus musculus	RefSeq	ILMN_218036	ILMN_218036	ZMAT5	NM_026015.2	NM_026015.2		67178	142375105	NM_026015.2	Zmat5	NP_080291.1	ILMN_2690772	001190653	S	468	AGAACCACTGTCTTCCAGTATCCAGTGGGCTGGCCGCCAATGCAGGAGCT	11	+	4625248-4625297	11qA1	Mus musculus zinc finger, matrin type 5 (Zmat5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D11Bwg1548e; 2610510L01Rik; RP23-280J3.5; D11Bwg0572e	D11Bwg1548e; 2610510L01Rik; RP23-280J3.5; D11Bwg0572e
Mus musculus	RefSeq	ILMN_216931	ILMN_216931	NPAS1	NM_008718.1	NM_008718.1		18142	6679099	NM_008718.1	Npas1	NP_032744.1	ILMN_2677113	000130059	S	1718	TGAGCCTGATGTATCCACATCTGCACAGGCTGGGCGCAGGCCCCTCGCTT	7	-	17041261-17041310	7qA2	Mus musculus neuronal PAS domain protein 1 (Npas1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOP5	MOP5
Mus musculus	RefSeq	ILMN_207475	ILMN_207475	SYNGR1	NM_009303.2	NM_009303.2		20972	46877044	NM_009303.2	Syngr1	NP_033329.1	ILMN_3101732	004850196	A	446	AGTGGCAAGTCTCCAAGCCCAAGGACAACCCTCTGAACGAAGGGACGGAC	15	+	79942077-79942126	15qE1	Mus musculus synaptogyrin 1 (Syngr1), transcript variant 1b, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISO]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISO]		p29; R75468; Syngr1b	p29; R75468; Syngr1b
Mus musculus	RefSeq	ILMN_207475	ILMN_207475	SYNGR1	NM_009303.2	NM_009303.2		20972	46877044	NM_009303.2	Syngr1	NP_033329.1	ILMN_3028575	001240154	I	598	GAATACAACACACTGTTCCCTGCCTCCGCACAACCGTAGTCCCTGAAGGA	15	+	79943650-79943688:79943689-79943699	15qE1	Mus musculus synaptogyrin 1 (Syngr1), transcript variant 1b, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISO]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISO]		p29; R75468; Syngr1b	p29; R75468; Syngr1b
Mus musculus	MEEBO	ILMN_193324	ILMN_193324	1700037C18RIK	scl48823.6.33_10				51769554	XM_484521	1700037C18Rik		ILMN_2496139	006510021	S	19	TGGATGTGATATCACGATACCATGAGTCTGGGTACCTGAGGGAGAGAGCA										
Mus musculus	RefSeq	ILMN_211804	ILMN_211804	ZFP819	NM_028913.2	NM_028913.2		74400	142354247	NM_028913.2	Zfp819	NP_083189.1	ILMN_2619689	005050041	S	2163	AAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGACAC	7	+	50873456-50873505	7qB4	Mus musculus zinc finger protein 819 (Zfp819), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4933405K07Rik; 4930427I11Rik	4933405K07Rik; 4930427I11Rik
Mus musculus	RefSeq	ILMN_223146	ILMN_223146	RPL24	NM_024218.2	NM_024218.2		68193	31340593	NM_024218.2	Rpl24	NP_077180.1	ILMN_2936118	003890398	S	1	GCTCTTCGCCATCTTTACCCCGGCAGGCCGACATCTATCACCATGAAGGT	16	+	55891344-55891384:55891385-55891389:55891498-55891501	16qC1.1	Mus musculus ribosomal protein L24 (Rpl24), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [evidence ISO]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISO]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The process whose specific outcome is the progression of the optic nerve over time, from its formation to the mature structure. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21554] [evidence IMP]; The cell cycle process where a cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place [goid 10458] [evidence IMP]; The aggregation, arrangement and bonding together of constituent RNAs and proteins to form and maintain the large ribosomal subunit [goid 27] [evidence IMP]; Any cell cycle checkpoint that blocks entry into S phase [goid 31575] [evidence IMP]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISO]	0610008L05Rik; Bst	0610008L05Rik; Bst
Mus musculus	RefSeq	ILMN_223360	ILMN_223360	HPS6	NM_176785.2	NM_176785.2		20170	142383223	NM_176785.2	Hps6	NP_789742.1	ILMN_2763051	005720291	S	2543	GAGATGCGAAGGGAAGGGTACCTAGGGTTATGAAGCACGAAGGTGGGACT	19	+	46078004-46078053	19qC3	Mus musculus Hermansky-Pudlak syndrome 6 (Hps6), mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ru; 5330434M19Rik; MGC31055	ru; 5330434M19Rik; MGC31055
Mus musculus	RefSeq	ILMN_186570	ILMN_186570	V2R15	NM_009490.2	NM_009490.2		22306	126507093	NM_009490.2	V2r15	NP_033516.2	ILMN_1242397	006660259	S	3353	CAATTTTATTCTTCATTTTGATTTCATGGAGATGGCCCTCTGGTAACTGC	7	-	7264719-7264768	7qA1	Mus musculus vomeronasal 2, receptor, 15 (V2r15), mRNA.					
Mus musculus	RefSeq	ILMN_186570	ILMN_186570	V2R15	NM_009490.2	NM_009490.2		22306	126507093	NM_009490.2	V2r15	NP_033516.2	ILMN_1260547	005270669	I	3377	CATGGAGATGGCCCTCTGGTAACTGCCAAAAAATGTTGATAAGGCAGTTG	7	-	7264695-7264744	7qA1	Mus musculus vomeronasal 2, receptor, 15 (V2r15), mRNA.					
Mus musculus	Riken	ILMN_203363	ILMN_203363	9330103H15RIK	ri|9330103H15|PX00104O17|AK079049|2197					AK079049	9330103H15Rik		ILMN_2556735	005860577	S	1676	GAGCCACAAACCCTGCCCAAGAGAATAGATTTGAAGCCTAGCTCTACCTC										
Mus musculus	RefSeq	ILMN_218216	ILMN_236563	HOXD8	NM_008276.2	NM_008276.2		15437	112807183	NM_008276.2	Hoxd8	NP_032302.2	ILMN_2693052	000580433	S	1222	GAGCTGGTGGTTTGCCTCAACAACATAAACTTCCTAATGATCAGCGCTAG	2	+	74545162-74545211	2qC3	Mus musculus homeo box D8 (Hoxd8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]	4921540P06Rik; AI047735; Hox-4.3; Hox-5.4	4921540P06Rik; AI047735; Hox-4.3; Hox-5.4
Mus musculus	RefSeq	ILMN_217445	ILMN_217445	ACP1	NM_021330.3	NM_021330.3		11431	142369381	NM_021330.3	Acp1	NP_067305.2	ILMN_1216089	002750132	S	2994	AAGGAATTATGGAAGAGTGCAAAAATAAATCTCTGTCCACAGGAAGTGGG	12	-	31578198-31578247	12qA2	Mus musculus acid phosphatase 1, soluble (Acp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA];  [goid 4726] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IDA]	Acp-1; MGC132904; LMW-PTP; MGC103115; AI427468; 4632432E04Rik	Acp-1; MGC132904; LMW-PTP; MGC103115; AI427468; 4632432E04Rik
Mus musculus	Riken	ILMN_205090	ILMN_205090	D630026G14RIK	ri|D630026G14|PX00197C21|AK052698|1638					AK052698	D630026G14Rik		ILMN_1231774	000360577	S	1491	ATCACCTATCTTAGTCCACCCATACCAGGAAGTCCTTACTGAGCCCCTGC										
Mus musculus	RefSeq	ILMN_186808	ILMN_186808	TREML4	NM_172623.1	NM_172623.1		224840	27369889	NM_172623.1	Treml4	NP_766211.1	ILMN_2438678	002000204	S	1146	ACAGGCTCTGTTTCCCAAGTGAGCTACTCACAAGGCCCATGCCTGTCCAC	17	+	48414128-48414177	17qC	Mus musculus triggering receptor expressed on myeloid cells-like 4 (Treml4), transcript variant 2, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IDCP1; BB137214; 5031403H21Rik; TLT4; Treml3	IDCP1; BB137214; 5031403H21Rik; TLT4; Treml3
Mus musculus	Riken	ILMN_205669	ILMN_205669	RHEB	ri|C130038E07|PX00169B07|AK048161|2606					AK048161	Rheb		ILMN_1237252	003140132	S	2150	GGGCTGCTGGTTGTAAGTGTAGTGCTAGCCCGGGGAGGAACACAGGATTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	Riken	ILMN_205724	ILMN_205724	MPP1	ri|9830104E14|PX00117P05|AK036415|2853					AK036415	Mpp1		ILMN_1219837	004810088	S	2687	CATAGTACCGGGAGTGATGTCAGAAATTTGGCCCTTAAAGTGGGCCTCTG						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_196171	ILMN_196171	NKCC2	scl0003293.1_522				1079516	U20973	NKCC2		ILMN_2522254	004610278	S	15	TGGGGGTTTTGCAGGTCTGGGCGTCATCATCATTGGCCTGAGCGTAGTTG										
Mus musculus	MEEBO	ILMN_184318	ILMN_184318	PKN2	scl12448.1.1_104				31340959	NM_178654	Pkn2		ILMN_2428290	003870491	S	20	ATATGTTGCTGTAAATTGCTTTAAAATGCCAGTTAGTTGCCTTGGAAGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220385	ILMN_220385	FGF8	NM_010205.1	NM_010205.1		14179	22094092	NM_010205.1	Fgf8	NP_034335.1	ILMN_2721370	004640392	S	915	AGCAGAGCCTGCGCTTCGAGTTCCTCAACTACCCGCCCTTCACGCGCAGC	19	-	45811511-45811560	19qC3	Mus musculus fibroblast growth factor 8 (Fgf8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IGI]; The process by which the anatomical structures of the forebrain are generated and organized. Morphogenesis pertains to the creation of form. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 48853] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence IDA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IDA]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]; The process by which the anatomical structures of the neural plate are generated and organized. Morphogenesis pertains to the creation of form. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue [goid 1839] [evidence IMP]; The creation of greater cell numbers in the forebrain due to cell division of progenitor cells [goid 21846] [evidence IMP]; The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain [goid 21798] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process whose specific outcome is the progression of the subpallium over time, from its formation to the mature structure. The subpallium is the base region of the telencephalon [goid 21544] [evidence IMP]; The process whose specific outcome is the progression of the pallium over time, from its formation to the mature structure. The pallium is the roof region of the telencephalon [goid 21543] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IGI]; Branching of the ureteric bud [goid 1658] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; The process by which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons [goid 48699] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Fgf-8; MGC59627; Aigf	Fgf-8; MGC59627; Aigf
Mus musculus	Riken	ILMN_201639	ILMN_201639	1110020G09RIK	ri|1110020G09|R000016P11|AK003858|1293					AK003858	1110020G09Rik		ILMN_1259814	001230349	S	996	CAGTGATACCGTGAAAGAGCAGCGGGAACACAGACACAAGCAGATCAGCC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: ATP + NAD+ = ADP + NADP+ [goid 3951] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215359	ILMN_215359	BTF3L4	NM_027453.2	NM_027453.2		70533	133892989	NM_027453.2	Btf3l4	NP_081729.1	ILMN_2658543	002970397	S	3047	ATAGGTGAAACTTTAGTAAACTATATGGATCTTGGCATAAACATGAATTA	4	-	108486914-108486963	4qC7	Mus musculus basic transcription factor 3-like 4 (Btf3l4), mRNA.				5730434I03Rik; 4632412E09Rik; AU022207; AW552446; AI316863	5730434I03Rik; 4632412E09Rik; AU022207; AW552446; AI316863
Mus musculus	MEEBO	ILMN_213869	ILMN_213869	LRFN3	scl31528.3.1_16				30425223	NM_175478	Lrfn3		ILMN_2771787	002510475	S	2819	GTTTTTAAAACTCTGATGGGGAGGGTGTCGGGGGCACCGGGGCACAACAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195820	ILMN_195820	2900037P16RIK	scl618.1.1_24						2900037P16Rik		ILMN_2519020	005090021	S	13	CTCCACGCTCCACAAGACAAGAGCCAAATGCCCAGGAAAGTATTGGGGGC										
Mus musculus	RefSeq	ILMN_211599	ILMN_211599	BCL2L12	NM_029410.1	NM_029410.1		75736	21553304	NM_029410.1	Bcl2l12	NP_083686.1	ILMN_2935909	001570047	S	699	ACCGCCATCCCCGGATCCTCTGGCACGCCTGGCACTAGCCATGGAATTGA	7	-	44860879-44860928	7qB4	Mus musculus BCL2-like 12 (proline rich) (Bcl2l12), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		Bcl-L12; 5430429M05Rik; Bcl2-L12; 2810475P17Rik	Bcl-L12; 5430429M05Rik; Bcl2-L12; 2810475P17Rik
Mus musculus	RefSeq	ILMN_192135	ILMN_246397	PTP4A1	NM_011200.2	NM_011200.2		19243	117606373	NM_011200.2	Ptp4a1	NP_035330.1	ILMN_1223414	000020079	S	3766	CCGGCCCCATAGCCTAGCTGTAATCGCAATCCTGGGATCTGTTGTGTTAC	1	-	30997461-30997510	1qA5	Mus musculus protein tyrosine phosphatase 4a1 (Ptp4a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: prenylated-protein tyrosine phosphate + H2O = prenylated-protein tyrosine + phosphate [goid 4727] [evidence TAS]	MGC102117; AU019864; AA415290; C130021B01; Prl-1; MGC25304	MGC102117; AU019864; AA415290; C130021B01; Prl-1; MGC25304
Mus musculus	RefSeq	ILMN_217905	ILMN_217905	MYBPC3	NM_008653.2	NM_008653.2		17868	134031946	NM_008653.2	Mybpc3	NP_032679.2	ILMN_2689136	003400577	S	3766	CTGCCCCTATGATGGTGGTGTCTATGTCTGCAGGGCCACCAACTTGCAGG	2	+	90975994-90976043	2qE1	Mus musculus myosin binding protein C, cardiac (Mybpc3), mRNA.	The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence TAS]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IMP]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The aggregation, arrangement and bonding together of a filament composed of myosin molecules [goid 31034] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IPI]	Interacting selectively with a heavy chain of a myosin complex [goid 32036] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]		
Mus musculus	RefSeq	ILMN_211396	ILMN_211396	1200009O22RIK	NM_025817.3	NM_025817.3		66873	31541813	NM_025817.3	1200009O22Rik	NP_080093.1	ILMN_2615431	005420309	S	5076	TCTGCCTTGCCCAACTGTAGACTGTCACCAAAACCCTTTAATGCCTGGAC	6	-	53765563-53765612	6qB3	Mus musculus RIKEN cDNA 1200009O22 gene (1200009O22Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI316813; mKIAA0644	AI316813; mKIAA0644
Mus musculus	RefSeq	ILMN_225623	ILMN_225623	ANKRD40	NM_146024.1	NM_146024.1		71452	125656166	NM_146024.1	Ankrd40	NP_666136.1	ILMN_3109098	002570520	A	814	TGCCCCCTCTGCCATACTTAGAACACCAGAAAGCACAAAACCTGGTCCTG	11	+	94196019-94196068	11qD	Mus musculus ankyrin repeat domain 40 (Ankrd40), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gcap15; MGC29030; 5530600A18Rik; RP23-65I14.1; 1110011C06Rik	Gcap15; MGC29030; 5530600A18Rik; RP23-65I14.1; 1110011C06Rik
Mus musculus	RefSeq	ILMN_225623	ILMN_225623	ANKRD40	NM_146024.1	NM_146024.1		71452	125656166	NM_146024.1	Ankrd40	NP_666136.1	ILMN_3035378	002600600	I	1265	TGCTCTGTTGCCTTGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTA	11	+	94200620-94200669	11qD	Mus musculus ankyrin repeat domain 40 (Ankrd40), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gcap15; MGC29030; 5530600A18Rik; RP23-65I14.1; 1110011C06Rik	Gcap15; MGC29030; 5530600A18Rik; RP23-65I14.1; 1110011C06Rik
Mus musculus	RefSeq	ILMN_197106	ILMN_197106	LOC381328	XM_355283.1	XM_355283.1			38074108	XM_355283.1	LOC381328		ILMN_1260057	005340341	S	3233	CACGAGAGCCAGGACTGAGTATAACAATGACACCTGAGATAGAGCTGAGC										
Mus musculus	RefSeq	ILMN_197106	ILMN_197106	LOC381328	XM_355283.1	XM_355283.1			38074108	XM_355283.1	LOC381328		ILMN_1225050	000270386	S	3127	GAAAACTTATCATCCGGAGACGGCCTGGTGGATGGCTGGAGAAGGAGACG										
Mus musculus	RefSeq	ILMN_211951	ILMN_211951	CDK5RAP3	NM_030248.1	NM_030248.1		80280	13384787	NM_030248.1	Cdk5rap3	NP_084524.1	ILMN_1214934	003830528	S	1774	GGCCTGTCAGCCTTAAGGCACACTTGCTGCTTCTAGTTGTCAAGTGAGGC	11	-	96769151-96769200	11qD	Mus musculus CDK5 regulatory subunit associated protein 3 (Cdk5rap3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC002318; HSF-27; MGC8303; C81486; MST016; IC53; C53; 1810007E24Rik	BC002318; HSF-27; MGC8303; C81486; MST016; IC53; C53; 1810007E24Rik
Mus musculus	Riken	ILMN_202733	ILMN_202733	9530055J05RIK	ri|9530055J05|PX00113K07|AK020610|581					AK020610	9530055J05Rik		ILMN_1257126	006370347	S	485	CTGCATCTCGGAGGAAGGACGCTAAAGACGAGAATCCAGCTGAGGATCAG										
Mus musculus	RefSeq	ILMN_197948	ILMN_319730	LOC385905	XR_034995.1	XR_034995.1		385905	149267541	XR_034995.1	LOC385905		ILMN_2529932	006370131	S	509	GATCGACCCATCAGGTGTTTCATATGGTTGCTGGGGCTGTGCGATTGGCG	16	+	45412146-45412195	16qB5	PREDICTED: Mus musculus similar to proteasome alpha7/C8 subunit (LOC385905), misc RNA.					
Mus musculus	MEEBO	ILMN_188988	ILMN_188988	SCL0002368.1_75	scl0002368.1_75	AK012612.1			12849469	AK012612.1	scl0002368.1_75		ILMN_2550423	000730017	S	1303	GTTAACTGCAAACATGTGGACGGCCTCGGGGTAAATGGGCTCCGTGATCA										
Mus musculus	MEEBO	ILMN_188988	ILMN_188988	SCL0002368.1_75	scl0002368.1_75	AK012612.1			12849469	AK012612.1	scl0002368.1_75		ILMN_1214650	002260653	S	1556	GGAGCTGGCCGCATCCACCACCATCCGCTGCCCGCTTTATTACATGTCAA										
Mus musculus	RefSeq	ILMN_232381	ILMN_232381	GM410	NM_001033349.2	NM_001033349.2		242037	142371783	NM_001033349.2	Gm410	NP_001028521.1	ILMN_3160634	004150731	S	1316	CTGCCAAGTGATAGGCTGAAAACAGTGGCCACTTCTTCCCAAGCCCACAT	3	-	57471737-57471786	3qD	Mus musculus gene model 410, (NCBI) (Gm410), mRNA.					
Mus musculus	RefSeq	ILMN_199138	ILMN_199138	LOC380703	XM_354616.1	XM_354616.1			38091414	XM_354616.1	LOC380703		ILMN_1254868	001450382	S	1013	TATCTCCATCAGGGAAGACCACACCCTGCCCAGGAAATGTGCTGAGAACC										
Mus musculus	MEEBO	ILMN_223977	ILMN_223977	OLFR657	scl0258309.1_186				22129666	NM_146312	Olfr657		ILMN_2772534	003390411	S	753	CATCCTCATCCTCTTCTTCTACACTGTTGTTGTAGTGATTTCAGTAACTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_193133	ILMN_260687	SHH	NM_009170.2	NM_009170.2		20423	40254618	NM_009170.2	Shh	NP_033196.1	ILMN_2610013	002260450	S	2086	CTTGTCCTGCGTTTCAGAAGGCAAACCTCCGCATTCCTCTCCTGCTATGC	5	-	28783898-28783947	5qB1	Mus musculus sonic hedgehog (Shh), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IDA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 30162] [evidence IDA]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; The regionalization process that creates areas within the forebrain that will direct the behavior of cell migration in differentiation as the telencephalon develops [goid 21978] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IDA]; The process whereby neuroepithelial cells of the neural tube give rise to Brgmann glial cells, specialized bipotential progenitors cells of the cerebellum. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 60020] [evidence IDA]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IDA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; The process that activates or increases the rate or extent of granule cell precursor proliferation [goid 21940] [evidence IDA]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IDA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32435] [evidence IMP]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IDA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IDA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The removal of an internal amino acid sequence (an intein) from a protein during protein maturation; the excision of inteins is precise and the N- and C-terminal exteins are joined by a normal peptide bond. Protein splicing involves 4 nucleophilic displacements by the 3 conserved splice junction residues [goid 16539] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of alpha-beta T cell differentiation [goid 46639] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which the anatomical structures of the hindgut are generated and organized. Morphogenesis pertains to the creation of form [goid 7442] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42177] [evidence IMP]; Any process that increases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates, members of the Gli protein family are activated in this way. Activation of the Gli/Ci transcription factor is distinct from its stabilization, when proteolytic cleavage is inhibited [goid 7228] [evidence IDA]; Any process that increases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates, members of the Gli protein family are activated in this way. Activation of the Gli/Ci transcription factor is distinct from its stabilization, when proteolytic cleavage is inhibited [goid 7228] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus [goid 42307] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]; The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics [goid 8209] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with laminin-1, a glycoprotein trimer with the subunit composition alpha1, beta1, gamma1 [goid 43237] [evidence IDA]	9530036O11Rik; Hhg1; Dsh	9530036O11Rik; Hhg1; Dsh
Mus musculus	RefSeq	ILMN_260687	ILMN_260687	SHH	NM_009170.2	NM_009170.2		20423	40254618	NM_009170.2	Shh	NP_033196.1	ILMN_2802979	004560113	S	1786	GGGCAGTCCAAAGTAGACTATAAGGAAGCAAAAACCCCGGGGAGTTCTGT	5	-	28784198-28784247	5qB1	Mus musculus sonic hedgehog (Shh), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IDA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 30162] [evidence IDA]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; The regionalization process that creates areas within the forebrain that will direct the behavior of cell migration in differentiation as the telencephalon develops [goid 21978] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IDA]; The process whereby neuroepithelial cells of the neural tube give rise to Brgmann glial cells, specialized bipotential progenitors cells of the cerebellum. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 60020] [evidence IDA]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IDA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; The process that activates or increases the rate or extent of granule cell precursor proliferation [goid 21940] [evidence IDA]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IDA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32435] [evidence IMP]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IDA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IDA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The removal of an internal amino acid sequence (an intein) from a protein during protein maturation; the excision of inteins is precise and the N- and C-terminal exteins are joined by a normal peptide bond. Protein splicing involves 4 nucleophilic displacements by the 3 conserved splice junction residues [goid 16539] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of alpha-beta T cell differentiation [goid 46639] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which the anatomical structures of the hindgut are generated and organized. Morphogenesis pertains to the creation of form [goid 7442] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42177] [evidence IMP]; Any process that increases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates, members of the Gli protein family are activated in this way. Activation of the Gli/Ci transcription factor is distinct from its stabilization, when proteolytic cleavage is inhibited [goid 7228] [evidence IDA]; Any process that increases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates, members of the Gli protein family are activated in this way. Activation of the Gli/Ci transcription factor is distinct from its stabilization, when proteolytic cleavage is inhibited [goid 7228] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus [goid 42307] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]; The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics [goid 8209] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with laminin-1, a glycoprotein trimer with the subunit composition alpha1, beta1, gamma1 [goid 43237] [evidence IDA]	9530036O11Rik; Hhg1; Dsh	9530036O11Rik; Hhg1; Dsh
Mus musculus	RefSeq	ILMN_220201	ILMN_220201	OLFR290	NM_146416.1	NM_146416.1		258411	33238965	NM_146416.1	Olfr290	NP_666528.1	ILMN_1231934	002710332	S	601	GTGATAGGAGGTATCTGTGGGGTTGGTGCTTTTCTGATCACTCTGATCTC	7	+	92064891-92064940	7qD3	Mus musculus olfactory receptor 290 (Olfr290), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR254-1; MGC157560	MOR254-1; MGC157560
Mus musculus	MEEBO	ILMN_214933	ILMN_214933	CD63	scl012512.6_24	NM_007653.1			6680887	NM_007653.1	Cd63		ILMN_2653617	007050487	S	512	CTGGGAAAACATCCCCGGCATGGCCAAGGACAGAGTCCCCGATTCTTGCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence ISO]				
Mus musculus	RefSeq	ILMN_212313	ILMN_212313	MRGPRB2	NM_175531.3	NM_175531.3		243979	141801044	NM_175531.3	Mrgprb2	NP_780740.1	ILMN_1257975	004730181	S	1791	CCATGGTCGAGTGTTTTCCCTTTACTCCCTGCCTTTGCTGTGATTTCTGC	7	-	55806571-55806620	7qB4	Mus musculus MAS-related GPR, member B2 (Mrgprb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC130390; 4833406I20Rik; MGC130391	MGC130390; 4833406I20Rik; MGC130391
Mus musculus	MEEBO	ILMN_194395	ILMN_194395	A130090K04RIK	scl38237.12_618						A130090K04Rik		ILMN_2506039	006650626	S	7	GGGCAAGATGTTACTGTGGGGTTGATACCTTATCTGTCATTGTGCTTTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	MEEBO	ILMN_215316	ILMN_215316	1110031B11RIK	scl068694.4_24	NM_026811.1			13386165	NM_026811.1	1110031B11Rik		ILMN_1258290	001850059	S	124	CCCCAAATGCCCTCCCAAATGCCAGATCCCAAAGTGCCCTCCAAAATGCC										
Mus musculus	RefSeq	ILMN_214781	ILMN_311617	4930412D23RIK	XM_001481263.1	XM_001481263.1		73934	149272176	XM_001481263.1	4930412D23Rik	XP_001481313.1	ILMN_2651848	003780376	S	2124	GCATTAAGTTTTATTTCTTACAGTCCTTCAATGGAAAAAGGGAAAATTCC				XqE3	PREDICTED: Mus musculus RIKEN cDNA 4930412D23 gene (4930412D23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_208990	ILMN_208990	INSRR	NM_011832.1	NM_011832.1		23920	6754361	NM_011832.1	Insrr	NP_035962.1	ILMN_2800070	001710551	S	4715	CCCCTCTGTCCCACATACCAGGACAAAGCAGGAACCCTAGGACCCTCACT	3	+	87619747-87619796	3qF1	Mus musculus insulin receptor-related receptor (Insrr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	IRR	IRR
Mus musculus	MEEBO	ILMN_185623	ILMN_185623	ZFP288	scl0001841.1_90	XM_147215.1			20892544	XM_147215.1	Zfp288		ILMN_1259424	004670280	S	18	GTTCTTCCCATTACTCCACGGGTCCTGTCTCTAAGCTTCCTGACAAATGC										
Mus musculus	RefSeq	ILMN_200031	ILMN_235413	LOC672081	XM_990964.1	XM_990964.1		672081	94401167	XM_990964.1	LOC672081	XP_996058.1	ILMN_2537351	006480471	S	12	GGCGACTTCAGGATGGAGTAGGAAGAGAGAAAGAGAACAGCCGCGGGGAA					PREDICTED: Mus musculus similar to RIKEN cDNA 0610040D20 (LOC672081), mRNA.					
Mus musculus	RefSeq	ILMN_212220	ILMN_212220	1700020C11RIK	NM_026443.4	NM_026443.4		67900	142362099	NM_026443.4	1700020C11Rik	NP_080719.2	ILMN_2624145	000110601	S	673	GGTCGGCCCACTCACATCAAAGAATGTGGATACGTGGCTGTTTGGGGTCC	11	-	3992157-3992206	11qA1	Mus musculus RIKEN cDNA 1700020C11 gene (1700020C11Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA];  [goid 15976] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence ISA]	Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mtp18; RP23-81P12.9; 2610507A21Rik; AV005788	Mtp18; RP23-81P12.9; 2610507A21Rik; AV005788
Mus musculus	RefSeq	ILMN_191254	ILMN_252147	4933440N22RIK	XM_917321.2	XM_917321.2		74471	94377848	XM_917321.2	4933440N22Rik	XP_922414.1	ILMN_2477500	004540563	S	1202	AGGGCAGCCGCGGCGCCATTCTGACGAGCCCAGAACGGAGCCTAGGATTG				6qF1	PREDICTED: Mus musculus RIKEN cDNA 4933440N22 gene (4933440N22Rik), mRNA.					
Mus musculus	Riken	ILMN_203396	ILMN_203396	6430526N21RIK	ri|6430526N21|PX00046O11|AK032361|3346					AK032361	6430526N21Rik		ILMN_2556989	002320689	S	2873	GGGTGTTTCAGTATGCCACTCCAATCAGATACTCCCTTCTGGACTCTTCC										
Mus musculus	MEEBO	ILMN_192976	ILMN_192976	2310014F06RIK	scl069625.1_234				51761853	XM_489201	2310014F06Rik		ILMN_1249753	006840162	S	4	GAGTTCTGCTGTTCAGGTTTTGCACGCTTCTCCACATTTCGCCGTTTCCC										
Mus musculus	Riken	ILMN_206646	ILMN_206646	4930543G11RIK	ri|4930543G11|PX00314I01|AK076900|2334					AK076900	4930543G11Rik		ILMN_1233640	005090630	S	1462	GCCCCACTGTGTGCTGAGCTGGTAGAATGGTGGGACAAGTGCTTGGTGCA										
Mus musculus	MEEBO	ILMN_195756	ILMN_195756	GRB10	scl40508.22_194				6754063	NM_010345	Grb10		ILMN_2518412	004260433	S	18	CCCTTTCTGCACTTAAATACCTGACAGCCTGTTCGATCGCTGTGCCTCCG						That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IPI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IPI]		
Mus musculus	MEEBO	ILMN_219957	ILMN_219957	SCN3A	scl19198.2.1_1	NM_018732.1			9055329	NM_018732.1	Scn3a		ILMN_2715720	003360477	S	3108	ACTCAGGCGAGTGGAGAGCAGGAGACAGGGCAAAGGATGTGCCGGTGTGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216226	ILMN_216226	AFP	NM_007423.3	NM_007423.3		11576	142356981	NM_007423.3	Afp	NP_031449.2	ILMN_1245472	005820315	S	1922	GGCTTAACTGTAACTGCTAGTACTTTAACCACATGGTGAAGATGTCCATG	5	+	90937792-90937841	5qE1	Mus musculus alpha fetoprotein (Afp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IMP]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; The chemical reactions and pathways involving progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants [goid 42448] [evidence IMP]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with nickel (Ni) ions [goid 16151] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate [goid 4566] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197728	ILMN_319349	LOC676200	XR_031096.1	XR_031096.1		676200	149267011	XR_031096.1	LOC676200		ILMN_1257799	006960017	S	441	GATCAGCAAGCCTGTGGTCGTGATCAAGGGACTGAATGCGGTGGGGGAAT				15qE1	PREDICTED: Mus musculus similar to Cytochrome P450, family 2, subfamily d, polypeptide 13 (LOC676200), misc RNA.					
Mus musculus	MEEBO	ILMN_192804	ILMN_192804	4833427F10RIK	scl50769.2_65						4833427F10Rik		ILMN_1231972	007510324	S	10	GGCTGGTTACGTCAGCTGACAAATGTTGCAAGGGTGAGCACTGGATGCCG										
Mus musculus	MEEBO	ILMN_217481	ILMN_217481	KCNJ15	scl016516.5_27	NM_019664.3			34482049	NM_019664.3	Kcnj15		ILMN_2725844	006180594	S	2623	ACGCCTGCATTTCCTTGGGAAAGAGAATTAAGCAGGCTAGGATTGACTGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IDA]		
Mus musculus	RefSeq	ILMN_224136	ILMN_312776	LOC100044549	XM_001472677.1	XM_001472677.1		100044549	149254695	XM_001472677.1	LOC100044549	XP_001472727.1	ILMN_1232419	000240619	S	1040	CAGCTGAGGTTCCCCACCTAAGCTTATCTCATGTTTTTAGAGACAATATC					PREDICTED: Mus musculus hypothetical protein LOC100044549, transcript variant 1 (LOC100044549), mRNA.					
Mus musculus	RefSeq	ILMN_226552	ILMN_226552	SYTL2	NM_001040086.1	NM_001040086.1		83671	91718890	NM_001040086.1	Sytl2	NP_001035175.1	ILMN_3052850	004590537	I	2426	GCAACACCATATAAGAGACAAGAGGAAGAGCAAGGGCCAGAGGCATGCTC	7	+	97531581-97531630	7qE1	Mus musculus synaptotagmin-like 2 (Sytl2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IPI]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IDA]	Slp2-d; AI266830; Slp2-a; mKIAA1597; Slp2-c; Slp2; KIAA1597; Slp2-b	Slp2-d; AI266830; Slp2-a; mKIAA1597; Slp2-c; Slp2; KIAA1597; Slp2-b
Mus musculus	Riken	ILMN_205909	ILMN_205909	A830016G09RIK	ri|A830016G09|PX00154H17|AK043660|1497					AK043660	A830016G09Rik		ILMN_1232371	003440131	S	1177	GTGAACTGTGTAGCAGGGAACCACATACATTCATGTTCTCATTTAACCCC										
Mus musculus	RefSeq	ILMN_203242	ILMN_221203	GIYD2	NM_029420.3	NM_029420.3		75764	142386645	NM_029420.3	Giyd2	NP_083696.2	ILMN_2555803	004890450	S	488	CCTTTGCCTTCCACTTGCGCGTTCTGGCGCACATGCTTCGAGTTCCTCCG	7	-	133836047-133836096	7qF3	Mus musculus GIY-YIG domain containing 2 (Giyd2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]	2410170E21Rik; 4833422P03Rik	2410170E21Rik; 4833422P03Rik
Mus musculus	RefSeq	ILMN_202218	ILMN_221203	GIYD2	NM_029420.3	NM_029420.3		75764	142386645	NM_029420.3	Giyd2	NP_083696.2	ILMN_1238519	006660612	S	958	GAGGAGGAACACTGGACAGACTTGCTGGAGACTTGATCCTAAGTGTCCCC	7	-	133835125-133835139:133835140-133835169:133835253-133835257	7qF3	Mus musculus GIY-YIG domain containing 2 (Giyd2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]	2410170E21Rik; 4833422P03Rik	2410170E21Rik; 4833422P03Rik
Mus musculus	RefSeq	ILMN_185895	ILMN_319505	LOC100044251	XM_001471796.1	XM_001471796.1		100044251	149256776	XM_001471796.1	LOC100044251	XP_001471846.1	ILMN_1248701	003440382	S	662	TTTACAGCAGAATCTCACCGGAATCCAGAGCCACTCAGAAGATCCTAGTC					PREDICTED: Mus musculus hypothetical protein LOC100044251 (LOC100044251), mRNA.					
Mus musculus	RefSeq	ILMN_198405	ILMN_198405	LOC225927	XM_129198.4	XM_129198.4			38084861	XM_129198.4	LOC225927		ILMN_2531572	001570750	S	1106	TGTAGGTATTGCTACTGGGCCACAGAATGAGTAACACGTGGTACCAACTC										
Mus musculus	RefSeq	ILMN_227445	ILMN_227445	APTX	NM_025545.4	NM_025545.4		66408	115292446	NM_025545.4	Aptx	NP_079821.3	ILMN_3037920	007150086	I	144	GAGGTGCACTAGCAGTGTCCCCAGCGGGCCTTAAGAATGCCGGAAGCAGT	4	-	40644386-40644386:40649757-40649770:40649771-40649805	4qA5	Mus musculus aprataxin (Aptx), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase [goid 6266] [evidence IDA]; The repair of single strand breaks in DNA. Repair of such breaks is mediated by the same enzyme systems as are used in base excision repair [goid 12] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 5'-AMP-DNA + H2O = AMP + DNA; nucleophilic release of a covalently linked adenylate residue from a DNA strand, leaving a 5' phosphate terminus [goid 33699] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence TAS]	2410016G21Rik; AA388047	2410016G21Rik; AA388047
Mus musculus	RefSeq	ILMN_219880	ILMN_253161	DNAHC6	XM_913416.3	XM_913416.3		330355	149255215	XM_913416.3	Dnahc6	XP_918509.3	ILMN_2714713	000130373	S	2656	AACAGTCAAGTTACTAAATACGCTAAATTTGTGACCCAGCTGGAAAAGGG	6	-	73110918-73110967	6qC1	PREDICTED: Mus musculus dynein, axonemal, heavy chain 6 (Dnahc6), mRNA.					
Mus musculus	Riken	ILMN_204671	ILMN_204671	9630050A07RIK	ri|9630050A07|PX00117O14|AK036261|1344					AK036261	9630050A07Rik		ILMN_1212849	000020626	S	1164	AGGGTCGTTTGGGCTGGAGAGATAGCTCAGAGTGCTGGCTGTTCTTCCTG										
Mus musculus	RefSeq	ILMN_208815	ILMN_208815	TLE4	NM_011600.2	NM_011600.2		21888	38372894	NM_011600.2	Tle4	NP_035730.2	ILMN_2589792	003800168	S	4394	CGCATTGTGTTGGCCACCAGTACTTCTATGATGGTAGATTGTTTGTGCAT	19	-	14522673-14522722	19qA	Mus musculus transducin-like enhancer of split 4, homolog of Drosophila E(spl) (Tle4), mRNA. XM_924093 XM_924097 XM_924099 XM_924101 XM_924105 XM_924108 XM_924112 XM_924118	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IGI]	ESTM13; ESTM14; X83332; 5730411M05Rik; Bce1; AA792082; X83333; Grg4; Bce-1	ESTM13; ESTM14; X83332; 5730411M05Rik; Bce1; AA792082; X83333; Grg4; Bce-1
Mus musculus	RefSeq	ILMN_208815	ILMN_208815	TLE4	NM_011600.2	NM_011600.2		21888	38372894	NM_011600.2	Tle4	NP_035730.2	ILMN_3011214	005490161	I	549	CGCAGCCAACTAAAGCGGCGTGGATGATTCGCGACCTGAGCAAGATGTAC	19	-	14671875-14671902:14671903-14671924	19qA	Mus musculus transducin-like enhancer of split 4, homolog of Drosophila E(spl) (Tle4), mRNA. XM_924093 XM_924097 XM_924099 XM_924101 XM_924105 XM_924108 XM_924112 XM_924118	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IGI]	ESTM13; ESTM14; X83332; 5730411M05Rik; Bce1; AA792082; X83333; Grg4; Bce-1	ESTM13; ESTM14; X83332; 5730411M05Rik; Bce1; AA792082; X83333; Grg4; Bce-1
Mus musculus	RefSeq	ILMN_208815	ILMN_208815	TLE4	NM_011600.2	NM_011600.2		21888	38372894	NM_011600.2	Tle4	NP_035730.2	ILMN_2746356	002510504	S	911	GTGGAACGGGCCAAGCAGGTGACCATGGCAGAACTGAACGCCATCATTGG	19	-	14619278-14619327	19qA	Mus musculus transducin-like enhancer of split 4, homolog of Drosophila E(spl) (Tle4), mRNA. XM_924093 XM_924097 XM_924099 XM_924101 XM_924105 XM_924108 XM_924112 XM_924118	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IGI]	ESTM13; ESTM14; X83332; 5730411M05Rik; Bce1; AA792082; X83333; Grg4; Bce-1	ESTM13; ESTM14; X83332; 5730411M05Rik; Bce1; AA792082; X83333; Grg4; Bce-1
Mus musculus	RefSeq	ILMN_217172	ILMN_217172	RALBP1	NM_009067.3	NM_009067.3		19765	148747256	NM_009067.3	Ralbp1	NP_033093.2	ILMN_1231228	002650370	S	3289	GGTCAGGTGTCAAATATAAATGTACAAACGCCTTGCTGCATCCCGTCCGG				17qE1.1	Mus musculus ralA binding protein 1 (Ralbp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the activity of the GTPase Cdc42 [goid 43089] [evidence IDA]	Interacting selectively with Ral protein, any member of the Ral subfamily of the Ras superfamily of monomeric GTPases [goid 17160] [evidence IPI]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IDA]	Rip1; RLIP76	Rip1; RLIP76
Mus musculus	RefSeq	ILMN_198898	ILMN_253386	CLEC3A	NM_001007223.2	NM_001007223.2		403395	118131104	NM_001007223.2	Clec3a	NP_001007224.1	ILMN_2533317	002940725	S	322	TCCGACGAAATCAATGCCCTTCGAGACTATGGTAAGAGGAGTCTGCCAGG	8	+	116949477-116949526	8qE1	Mus musculus C-type lectin domain family 3, member a (Clec3a), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Clecsf1; Gm796	Clecsf1; Gm796
Mus musculus	RefSeq	ILMN_253386	ILMN_253386	CLEC3A	NM_001007223.2	NM_001007223.2		403395	118131104	NM_001007223.2	Clec3a	NP_001007224.1	ILMN_2922596	001410221	S	420	GTTCCTCGATGTCCACGGATTCGCTGTCTCCTTCCTCAACTGGGACCGTG	8	+	116949575-116949624	8qE1	Mus musculus C-type lectin domain family 3, member a (Clec3a), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Clecsf1; Gm796	Clecsf1; Gm796
Mus musculus	RefSeq	ILMN_245075	ILMN_245075	CYBRD1	NM_028593.1	NM_028593.1		73649	115749413	NM_028593.1	Cybrd1	NP_082869.1	ILMN_2825562	006220215	S	359	CAGAGTCAAGCAGTGAGGGAGCAGCCCGGAAGAGAACCCTCGGCCTTGCT	2	+	70976638-70976687	2qC2	Mus musculus cytochrome b reductase 1 (Cybrd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the plasma membrane surrounding the brush border [goid 31526] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus [goid 10039] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 Fe2+ + NAD+ = 2 Fe3+ + NADH + H+ [goid 293] [evidence ISS]	Dcytb; 2210407P13Rik	Dcytb; 2210407P13Rik
Mus musculus	RefSeq	ILMN_212156	ILMN_212156	SPINLW1	NM_029325.1	NM_029325.1		75526	19263327	NM_029325.1	Spinlw1	NP_083601.1	ILMN_2803415	001340551	S	655	TCCCCATCACTAGCCTCAGCTGCTCAGCACCACCGTCAAAAGCTCCCAGT	2	-	164279598-164279647	2qH3	Mus musculus serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin) (Spinlw1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	1700024E17Rik; Eppin	1700024E17Rik; Eppin
Mus musculus	Riken	ILMN_206675	ILMN_206675	2410008A19RIK	ri|E330012H19|PX00211P15|AK087728|2063					AK087728	2410008A19Rik		ILMN_2581860	005340037	S	1767	ATGAAGTGGCTTCGCGTTGACACTGCTGCACGTCCGTGTAAACATAAAGG										
Mus musculus	RefSeq	ILMN_185026	ILMN_249083	4930505N22RIK	XM_001000740.1	XM_001000740.1		75056	94406322	XM_001000740.1	4930505N22Rik	XP_001000740.1	ILMN_2423577	005550128	S	50	TTCACGCCCTCTTCCTGAAGCGGGTTCAGACCACGATTCCCAGCAAGCAT				19qC3	PREDICTED: Mus musculus RIKEN cDNA 4930505N22 gene (4930505N22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211078	ILMN_211078	AICDA	NM_009645.2	NM_009645.2		11628	117940064	NM_009645.2	Aicda	NP_033775.1	ILMN_2624986	001770338	S	2144	GCTTTGCCCAACGAAATGTAGGAAACCAACATAGACTCCCAGTTTGTCCC	6	+	122513945-122513994	6qF1	Mus musculus activation-induced cytidine deaminase (Aicda), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: cytidine + H2O = uridine + NH3 [goid 4126] [evidence IDA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2 [goid 16814] [evidence IEA]	Aid; Arp2	Aid; Arp2
Mus musculus	RefSeq	ILMN_196579	ILMN_196579	D17H6S56E-5	NM_033075.2	NM_033075.2		110956	31982600	NM_033075.2	D17H6S56E-5	NP_149066.1	ILMN_1260061	003170494	S	2768	CCAGTCCAAAATGTACAGACACCCCTCACTATGAACACAAACAATCCTGG	17	-	34605288-34605337		Mus musculus DNA segment, Chr 17, human D6S56E 5 (D17H6S56E-5), mRNA.	The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]			G7e	G7e
Mus musculus	RefSeq	ILMN_214694	ILMN_214694	MMP1B	NM_032007.3	NM_032007.3		83996	115385969	NM_032007.3	Mmp1b	NP_114396.3	ILMN_1236455	007000674	S	1358	TACAGATTTAACCTCAAAACAAGAAGAATTGATGATTCCAGTGATATTAA	9	-	7368259-7368308	9qA1	Mus musculus matrix metallopeptidase 1b (interstitial collagenase) (Mmp1b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Mcol-B; Mcolb	Mcol-B; Mcolb
Mus musculus	RefSeq	ILMN_199514	ILMN_230194	LOC630242	XM_903363.2	XM_903363.2		630242	94393627	XM_903363.2	LOC630242	XP_908456.1	ILMN_1212755	007400692	S	222	GGAGTGGCTGGGAGTGATATGGAGTGGTGGAAGCACAGACTATAATGCTG					PREDICTED: Mus musculus similar to Ig heavy chain V region MC101 precursor (LOC630242), mRNA.					
Mus musculus	RefSeq	ILMN_190417	ILMN_314622	LOC100039786	XM_001473500.1	XM_001473500.1		100039786	149263878	XM_001473500.1	LOC100039786	XP_001473550.1	ILMN_1230620	002190088	S	707	CGGCTTTTGATGAGGCCATCGCAGAGCTCGATACACTGAACGAAGACTCC	13	-	13324532-13324581	13qA1	PREDICTED: Mus musculus similar to Ywhaq protein (LOC100039786), mRNA.					
Mus musculus	Riken	ILMN_202292	ILMN_202292	4932441P04RIK	ri|4932441P04|PX00019A17|AK016563|3178					AK016563	4932441P04Rik		ILMN_2548458	005490066	S	2845	CTTCCCTGAAAAGTGATCTAGGCTTCCTTAGGAAGAGAACCTTGACTGGC										
Mus musculus	RefSeq	ILMN_237313	ILMN_237313	CPB1	NM_029706.1	NM_029706.1		76703	56550070	NM_029706.1	Cpb1	NP_083982.1	ILMN_3160208	005080605	S	1033	GCCCGAGAACTATGAGGAGCTGAATGCCCTGGTGAAAGGTGCAGCAAAGG	3	-	20151910-20151938:20161332-20161352	3qA2	Mus musculus carboxypeptidase B1 (tissue) (Cpb1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence ISO]	AI504870; 0910001A18Rik; 1810063F02Rik; 2210008M23Rik	AI504870; 0910001A18Rik; 1810063F02Rik; 2210008M23Rik
Mus musculus	RefSeq	ILMN_222536	ILMN_222536	SLC25A3	NM_133668.2	NM_133668.2		18674	31981556	NM_133668.2	Slc25a3	NP_598429.1	ILMN_2960467	002650671	S	1410	CCATTGGTGCTATTCCTAAATTGTCCCCTCACTTAAGAAACTCCTGTGTT	10	-	90546429-90546478	10qC2	Mus musculus solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 (Slc25a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5730556H19Rik; Phc; PTP	5730556H19Rik; Phc; PTP
Mus musculus	Riken	ILMN_207043	ILMN_207043	TRB	ri|5830465M17|PX00040J21|AK077789|1995					AK077789	Trb		ILMN_1252622	001340373	S	1754	CTAGTCCATGGCGGCTTCAAACTGGCAGTGCTGCTTCAGTCTCCTGAGTG										
Mus musculus	RefSeq	ILMN_187504	ILMN_256560	PIK3R1	NM_001077495.1	NM_001077495.1		18708	117320523	NM_001077495.1	Pik3r1	NP_001070963.1	ILMN_1249335	005090270	S	1461	TGATAATACTGAACACCTCATAAAAGCGATAGAGATTTTAATCTCAACGG	13	-	102471428-102471477	13qD1	Mus musculus phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) (Pik3r1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IGI]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]; Interacting selectively with any of the insulin receptor substrate (IRS) proteins, adaptor proteins that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex [goid 43560] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence TAS]	p55alpha; AA414921; PI3K; p50alpha; p85alpha; C530050K14	p55alpha; AA414921; PI3K; p50alpha; p85alpha; C530050K14
Mus musculus	RefSeq	ILMN_256560	ILMN_256560	PIK3R1	NM_001077495.1	NM_001077495.1		18708	117320523	NM_001077495.1	Pik3r1	NP_001070963.1	ILMN_3114641	005050731	A	6542	CATACCGAGCTTGTCGCCATGAGATAGCATTGGCTGCCCAGGATGCTGCT	13	-	102451039-102451088	13qD1	Mus musculus phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) (Pik3r1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IGI]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]; Interacting selectively with any of the insulin receptor substrate (IRS) proteins, adaptor proteins that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex [goid 43560] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence TAS]	p55alpha; AA414921; PI3K; p50alpha; p85alpha; C530050K14	p55alpha; AA414921; PI3K; p50alpha; p85alpha; C530050K14
Mus musculus	RefSeq	ILMN_256560	ILMN_256560	PIK3R1	NM_001077495.1	NM_001077495.1		18708	117320523	NM_001077495.1	Pik3r1	NP_001070963.1	ILMN_3040050	001170626	I	1406	GAGTCCTCTCTGAGATTTTCAGCCCCGTGCTTTTCAGATTTCCAGCCGCC	13	-	102471667-102471716	13qD1	Mus musculus phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) (Pik3r1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IGI]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]; Interacting selectively with any of the insulin receptor substrate (IRS) proteins, adaptor proteins that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex [goid 43560] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence TAS]	p55alpha; AA414921; PI3K; p50alpha; p85alpha; C530050K14	p55alpha; AA414921; PI3K; p50alpha; p85alpha; C530050K14
Mus musculus	RefSeq	ILMN_213977	ILMN_213977	MTMR11	NM_181409.2	NM_181409.2		194126	31340971	NM_181409.2	Mtmr11	NP_852074.1	ILMN_2642922	002970609	S	2239	ATCCTCTCTCAGATCTGCTGAAACTGTTTGTTAGCGTCGTTCTCAGAGGC	3	+	95975135-95975155:95975156-95975184	3qF2.1	Mus musculus myotubularin related protein 11 (Mtmr11), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC59008; BC051083; CRA; AI035306	MGC59008; BC051083; CRA; AI035306
Mus musculus	RefSeq	ILMN_213977	ILMN_213977	MTMR11	NM_181409.2	NM_181409.2		194126	31340971	NM_181409.2	Mtmr11	NP_852074.1	ILMN_2655312	004670370	S	1360	GCCCGGACATTGTTTGGTTTCCAGTCACTAGTGCAGCGAGAGTGGGTGGC	3	+	95972587-95972636	3qF2.1	Mus musculus myotubularin related protein 11 (Mtmr11), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC59008; BC051083; CRA; AI035306	MGC59008; BC051083; CRA; AI035306
Mus musculus	RefSeq	ILMN_185661	ILMN_213977	MTMR11	NM_181409.2	NM_181409.2		194126	31340971	NM_181409.2	Mtmr11	NP_852074.1	ILMN_1241187	007320113	S	2212	GGTCCTCGGGAGATATTCTTGGTGTCCATTGTCTTAACAGTTCCTGAAGG	3	+	95975108-95975155:95975156-95975157	3qF2.1	Mus musculus myotubularin related protein 11 (Mtmr11), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC59008; BC051083; CRA; AI035306	MGC59008; BC051083; CRA; AI035306
Mus musculus	RefSeq	ILMN_213977	ILMN_213977	MTMR11	NM_181409.2	NM_181409.2		194126	31340971	NM_181409.2	Mtmr11	NP_852074.1	ILMN_2676662	001690025	S	2457	TTTGAAAACTAAGAAACAAGACCAGTTCAGAATGTGATTGCCCCTTTTCC	3	+	95975353-95975402	3qF2.1	Mus musculus myotubularin related protein 11 (Mtmr11), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC59008; BC051083; CRA; AI035306	MGC59008; BC051083; CRA; AI035306
Mus musculus	RefSeq	ILMN_188184	ILMN_188184	WDR3	NM_175552.3	NM_175552.3		269470	40254308	NM_175552.3	Wdr3	NP_780761.1	ILMN_1227117	005050202	S	2678	CCAGCAACCAGATGCTTGTGCCCGTGATAGAGAAACTAAAGGAAACAACT	3	-	99943005-99943054	3qF2.2	Mus musculus WD repeat domain 3 (Wdr3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins [goid 32040] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		AW546279; D030020G18Rik	AW546279; D030020G18Rik
Mus musculus	RefSeq	ILMN_219008	ILMN_219008	FCHO1	NM_028715.2	NM_028715.2		74015	27754000	NM_028715.2	Fcho1	NP_082991.2	ILMN_2703023	004390239	S	2804	GCTCAGCCAACTCCTCCGTCCACAAGCAGGCCCTGGCCTTTAGTATTCTT	8	-	74232557-74232606	8qB3.3	Mus musculus FCH domain only 1 (Fcho1), mRNA.				3322402E17Rik; KIAA0290; N28152	3322402E17Rik; KIAA0290; N28152
Mus musculus	RefSeq	ILMN_216758	ILMN_245371	4930511J11RIK	NM_029070.2	NM_029070.2		74720	141802133	NM_029070.2	4930511J11Rik	NP_083346.1	ILMN_2675000	004050255	S	1337	GTGCTTCTGGTAGTCCGGAAGAGAGGGAGTGTGGAGCCCTTATCACCTGA	16	-	8409388-8409437	16qA1	Mus musculus RIKEN cDNA 4930511J11 gene (4930511J11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_186464	ILMN_186464	SCL0002529.1_22	scl0002529.1_22	AK015131.1			12853351	AK015131.1	scl0002529.1_22		ILMN_1235935	003710575	S	12	GACAGTGAGTCAGAAAGAAAAGCTATGAAGAACAATAGGGAGTCAAGGGC										
Mus musculus	RefSeq	ILMN_222865	ILMN_222865	SPRR2I	NM_011475.2	NM_011475.2		20763	31981478	NM_011475.2	Sprr2i	NP_035605.1	ILMN_2948326	004880070	S	301	GCATTCATCGAGACCAAGAGAAGAAGAGGAACTCCATCTCACATGCCTCC	3	+	92212877-92212926	3qF1	Mus musculus small proline-rich protein 2I (Sprr2i), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_203271	ILMN_247436	ADAMTS6	NM_001081020.1	NM_001081020.1		108154	124486613	NM_001081020.1	Adamts6	NP_001074489.1	ILMN_1243378	005090441	S	3936	GGGATTTATTGATCCAAAGTGCTGGACACGGTATCAGGAGGGACTGCCAG	13	+	105283957-105284006	13qD1	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6 (Adamts6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5031426K13; ADAM-TS6; A930019D11Rik	5031426K13; ADAM-TS6; A930019D11Rik
Mus musculus	RefSeq	ILMN_211558	ILMN_249172	1700016C15RIK	NM_027077.2	NM_027077.2		69428	142371784	NM_027077.2	1700016C15Rik	NP_081353.1	ILMN_1222931	007610138	S	624	GCTTGGGAAATCAAGATCCAACCTTGAGAACATGTCATCTGTTGAAGGGA	1	+	179683311-179683360	1qH4	Mus musculus RIKEN cDNA 1700016C15 gene (1700016C15Rik), mRNA.					
Mus musculus	Riken	ILMN_202331	ILMN_202331	BCAR3	ri|4930511N06|PX00033I20|AK015763|1532					AK015763	Bcar3		ILMN_1232790	002340075	S	1314	CCCTGGGCTTTATATACATGAGGCCAGTGCTTGGCCACTGAACTGCATCC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_202832	ILMN_202832	SEMA3E	ri|6030404L01|PX00056K17|AK031300|1851					AK031300	Sema3e		ILMN_1228106	001400551	S	1402	CTGAGCAGTATGTCTCATGATGCTATGGGGTTGGATGTTCTAGCAACGTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]			
Mus musculus	RefSeq	ILMN_194807	ILMN_194807	TNP2	NM_013694.4	NM_013694.4		21959	62461573	NM_013694.4	Tnp2	NP_038722.3	ILMN_1224330	005090209	S	428	GTGTCCATTTGATCCCAAAATGAGATAGCCATCACTAGGGGACTGTTGGG	16	-	10788100-10788149	16qA1	Mus musculus transition protein 2 (Tnp2), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IGI]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IGI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	TP2; Tp-2	TP2; Tp-2
Mus musculus	RefSeq	ILMN_213304	ILMN_213304	2310079N02RIK	NM_025636.3	NM_025636.3		66566	146134922	NM_025636.3	2310079N02Rik	NP_079912.1	ILMN_2635801	007150349	S	784	GTGAGCTCCAGACTTGTATTTCCTCTTACGGTTGTGCATGCGGTTTGAGT				8qE2	Mus musculus RIKEN cDNA 2310079N02 gene (2310079N02Rik), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI449709	AI449709
Mus musculus	Riken	ILMN_206704	ILMN_206704	NEK8	ri|9430086G22|PX00316I15|AK079149|2883					AK079149	Nek8		ILMN_1227707	003890356	S	2620	GGCAGCAATTTGTTGACTTCAGCGCCTTTTCCTGGCATAGTAGGTCTGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184888	ILMN_249956	TNFRSF13B	NM_021349.1	NM_021349.1		57916	10946667	NM_021349.1	Tnfrsf13b	NP_067324.1	ILMN_2480814	005420735	S	575	AAACGTGTAGCTTCTGCTTCCCGGAGCGCAGTTCTCCCACTCAGGAGAGC	11	+	60960969-60961018	11qB2	Mus musculus tumor necrosis factor receptor superfamily, member 13b (Tnfrsf13b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Taci; 1200009E08Rik	Taci; 1200009E08Rik
Mus musculus	Riken	ILMN_206117	ILMN_206117	LY116	ri|B430214B15|PX00071L19|AK080934|3791					AK080934	Ly116		ILMN_1241598	005290327	S	3714	ATGTCGGGCCTGGTGTAGACAGATGTGCCTTGAAGCTTTAGATCCAGCCC										
Mus musculus	Riken	ILMN_203914	ILMN_203914	9830165F18RIK	ri|9830165F18|PX00118H12|AK036708|2347					AK036708	9830165F18Rik		ILMN_1235788	005420711	S	1863	GTAACTCCAATCCCAGGGAATCCAATACCATCCATGGGCACCAGGTGTGC										
Mus musculus	RefSeq	ILMN_190964	ILMN_259301	4933403F05RIK	NM_153794.4	NM_153794.4		108654	149408149	NM_153794.4	4933403F05Rik	NP_722489.1	ILMN_2661138	003400066	S	3061	CAAGAAACAGCTTATAGGCAAACCTGTAATATGTTGATAGCAGACAACAG				18qE2	Mus musculus RIKEN cDNA 4933403F05 gene (4933403F05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AV134576; AA987140; AW491926; MGC48232	AV134576; AA987140; AW491926; MGC48232
Mus musculus	RefSeq	ILMN_198032	ILMN_198032	LOC329443	XM_283748.2	XM_283748.2			38080704	XM_283748.2	LOC329443		ILMN_1242045	000010681	S	1503	CGACTCCAGCGCGACGCCTAGTGGCCAGCCGCAGAATGCACAGACCTCAA										
Mus musculus	RefSeq	ILMN_202232	ILMN_225038	4930404N11RIK	NM_001014836.2	NM_001014836.2		432479	142347338	NM_001014836.2	4930404N11Rik	NP_001014836.1	ILMN_1215486	003940338	S	464	AACCAGTTCGGGGCAAAGCTGTCCTGGCGGTCCGACTATGTGCCGCTCCT	10	-	80826920-80826969	10qC1	Mus musculus RIKEN cDNA 4930404N11 gene (4930404N11Rik), mRNA.				AI854616; 2210409H10Rik; 5730551K18Rik	AI854616; 2210409H10Rik; 5730551K18Rik
Mus musculus	MEEBO	ILMN_196213	ILMN_196213	436215_86_RC	436215_86_rc						436215_86_rc		ILMN_2522627	000520543	S	20	GTAATGTTTGTATACTATACGTGACATGAATGAAGGATAAACTCCACTTG										
Mus musculus	RefSeq	ILMN_219879	ILMN_239140	MPZL1	NM_001001880.2	NM_001001880.2		68481	140970932	NM_001001880.2	Mpzl1	NP_001001880.1	ILMN_2714708	005290286	S	2168	AATACATCTTTTTCGATTTCTGAATGGTGTTGTCTGCTTGTTTTTAACCA	1	-	167522344-167522393	1qH2.3	Mus musculus myelin protein zero-like 1 (Mpzl1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110007A10Rik; PZR	1110007A10Rik; PZR
Mus musculus	RefSeq	ILMN_206645	ILMN_239140	MPZL1	NM_001001880.2	NM_001001880.2		68481	140970932	NM_001001880.2	Mpzl1	NP_001001880.1	ILMN_1223687	004180746	S	726	GGAAACATTCGAAGCGGGATTATACCGGGGCCCAGTCATTTACGCACAGT	1	-	167523786-167523808:167534741-167534767	1qH2.3	Mus musculus myelin protein zero-like 1 (Mpzl1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110007A10Rik; PZR	1110007A10Rik; PZR
Mus musculus	RefSeq	ILMN_197474	ILMN_319264	LOC100045878	XM_001475078.1	XM_001475078.1		100045878	149265974	XM_001475078.1	LOC100045878	XP_001475128.1	ILMN_1250992	006220072	S	21	AGTGACTGCGATGCTGCTGTTCATGCTTGGGATGAGAAAGACCCACGGAG					PREDICTED: Mus musculus similar to TRAV6D-4 (LOC100045878), mRNA.					
Mus musculus	RefSeq	ILMN_203352	ILMN_327847	BC106179	XR_035322.1	XR_035322.1		320099	149267795	XR_035322.1	BC106179		ILMN_1258864	001780768	S	994	GAAAGGACCGAAGGAGCGGCCAGATGGTGGCTTCCAGTTCTCTTACAGAG				16qB1	PREDICTED: Mus musculus cDNA sequence BC106179 (BC106179), misc RNA.					
Mus musculus	RefSeq	ILMN_218040	ILMN_218040	SLC22A4	NM_019687.3	NM_019687.3		30805	118130537	NM_019687.3	Slc22a4	NP_062661.1	ILMN_1223035	000290504	S	2021	GGACTTGTGGAGAAATGCACACTATCTCATGAATTCTGGGCCACTCTTCC	11	-	53796817-53796866	11qB1.3	Mus musculus solute carrier family 22 (organic cation transporter), member 4 (Slc22a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement into, out of, within or between cells of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15697] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence ISO]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IGI]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IGI]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IDA]	Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [evidence ISO]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	Octn1	Octn1
Mus musculus	RefSeq	ILMN_217341	ILMN_250652	SMG7	NM_001005507.1	NM_001005507.1		226517	53828717	NM_001005507.1	Smg7	NP_001005507.1	ILMN_2682103	006450167	S	5541	TGTTTGGAATGTTTATGACTCTCTCGGCGGGGTTCCTCGCCTTGCCATCC	1	-	154684301-154684350	1qG3	Mus musculus Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) (Smg7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]		9430023P16Rik; mKIAA0250; MGC91209	9430023P16Rik; mKIAA0250; MGC91209
Mus musculus	RefSeq	ILMN_250652	ILMN_250652	SMG7	NM_001005507.1	NM_001005507.1		226517	53828717	NM_001005507.1	Smg7	NP_001005507.1	ILMN_2953017	005220204	S	5426	TCCGAGGTTGGAAATGTCACTGATTCTTGCACCTTAGACCAGCCAACAGG	1	-	154684416-154684465	1qG3	Mus musculus Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) (Smg7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]		9430023P16Rik; mKIAA0250; MGC91209	9430023P16Rik; mKIAA0250; MGC91209
Mus musculus	RefSeq	ILMN_241524	ILMN_241524	EG216082	NR_002887.1	NR_002887.1		216082	85540443	NR_002887.1	EG216082		ILMN_2901923	003830671	S	2872	CTCCTGGTTGACAGGAGTTTGCTGTCCTTGACACTCCACACGTGCGGGAC	10	+	71169907-71169956	10qB5.3	Mus musculus predicted gene, EG216082 (EG216082) on chromosome 10.					
Mus musculus	RefSeq	ILMN_211286	ILMN_211286	MAP1LC3A	NM_025735.1	NM_025735.1		66734	23956147	NM_025735.1	Map1lc3a	NP_080011.1	ILMN_2686183	000540301	S	5	CAGCCGCCACCGCCAGGCTCAGCGCGAGCCCCGCAGCCCTTGAGCTCGAG	2	+	155102204-155102253	2qH1	Mus musculus microtubule-associated protein 1 light chain 3 alpha (Map1lc3a), mRNA.	A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]	4922501H04Rik; 1010001H21Rik	4922501H04Rik; 1010001H21Rik
Mus musculus	RefSeq	ILMN_211286	ILMN_211286	MAP1LC3A	NM_025735.1	NM_025735.1		66734	23956147	NM_025735.1	Map1lc3a	NP_080011.1	ILMN_2832682	003190100	S	692	CAGTCATGTTCGGGTTGCTCTTTTGGGTGCTGGCTGGGTTGGGAGTGGGT	2	+	155103556-155103605	2qH1	Mus musculus microtubule-associated protein 1 light chain 3 alpha (Map1lc3a), mRNA.	A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]	4922501H04Rik; 1010001H21Rik	4922501H04Rik; 1010001H21Rik
Mus musculus	RefSeq	ILMN_215389	ILMN_229769	OLFR449	NM_147064.1	NM_147064.1		259067	22128826	NM_147064.1	Olfr449	NP_667275.1	ILMN_2658882	002750360	S	835	GTGACCCCTGCTCTCAATCCTTTCATTTATTGCCTAAGGAACCGAGAGGT	6	+	42788716-42788765	6qB2.1	Mus musculus olfactory receptor 449 (Olfr449), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR103-1	MOR103-1
Mus musculus	RefSeq	ILMN_219207	ILMN_219207	CRYGA	NM_007774.3	NM_007774.3		12964	40805837	NM_007774.3	Cryga	NP_031800.1	ILMN_2705692	002230343	S	553	CCTCCTTTTGCTTGTTACAGCCCATATATGCAATAAATAATCAACCTGTG	1	-	65146975-65147024	1qC2	Mus musculus crystallin, gamma A (Cryga), mRNA.		The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]	Cryg-4; DGcry-4	Cryg-4; DGcry-4
Mus musculus	RefSeq	ILMN_221971	ILMN_221971	GPR34	NM_011823.2	NM_011823.2		23890	31560527	NM_011823.2	Gpr34	NP_035953.2	ILMN_1237817	003290240	S	1333	TGTCCGTGACAGTCAAAATGCCCCAGTACAGCACTAAGGGTAATTGAGGC	X	+	12797274-12797320:12797321-12797323	XqA1.1	Mus musculus G protein-coupled receptor 34 (Gpr34), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213347	ILMN_213347	LIMK2	NM_010718.3	NM_010718.3		16886	77404369	NM_010718.3	Limk2	NP_034848.1	ILMN_2728634	000010066	S	195	TGAAGCCTGGAGGTGTCGGGGCTGTGGCACCTATGTTCCCCTGAGCCAGA	11	-	3292965-3293014	11qA1	Mus musculus LIM motif-containing protein kinase 2 (Limk2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Limk2b; C85310; A930024P04Rik; 9430059K01; Limk2a	Limk2b; C85310; A930024P04Rik; 9430059K01; Limk2a
Mus musculus	RefSeq	ILMN_215201	ILMN_215201	5430420C16RIK	NM_175165.2	NM_175165.2		71338	31340956	NM_175165.2	5430420C16Rik	NP_780374.1	ILMN_2984070	004180634	S	732	ATTTTCTGGGGGAGCACCGAGGGGTGGTCTCTACTGTCTCGTTGGAACCC	16	+	25328141-25328190	16qB1	Mus musculus RIKEN cDNA 5430420C16 gene (5430420C16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220523	ILMN_220523	UCK2	NM_030724.3	NM_030724.3		80914	146149338	NM_030724.3	Uck2	NP_109649.1	ILMN_1242013	005810070	S	1093	GGTCGAGAGGCTCTGGTCACCTGTACATACGCCTCCTCAGAAAATTACTG				1qH2.3	Mus musculus uridine-cytidine kinase 2 (Uck2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + uridine = ADP + UMP [goid 4849] [evidence IEA]	UK; AI481316; AU020720; UMK; TSA903; Umpk; AU018180; AA407809	UK; AI481316; AU020720; UMK; TSA903; Umpk; AU018180; AA407809
Mus musculus	RefSeq	ILMN_199257	ILMN_199257	LOC236397	XM_142956.5	XM_142956.5			38093511	XM_142956.5	LOC236397		ILMN_1239998	001470672	S	1657	GACACTGTGACAAGAAATGCGGAGCACAGTGACAGCACAGTGGATCATTG										
Mus musculus	RefSeq	ILMN_241842	ILMN_241842	D030013I16RIK	NM_001039164.1	NM_001039164.1		328734	85662392	NM_001039164.1	D030013I16Rik	NP_001034253.1	ILMN_2951310	000430739	S	1226	CCCAGAATGATTCATGTGACAGGCTGACCTGTGAGGTCCTGAGTGCCCTG	17	-	3020868-3020917	17qA1	Mus musculus RIKEN cDNA D030013I16 gene (D030013I16Rik), mRNA. XM_897988 XM_897998 XM_904163 XM_918687 XM_918696 XM_918713 XM_918727 XM_918743 XM_918759			Catalysis of the reaction: phosphatidyl-L-serine = phosphatidylethanolamine + CO2 [goid 4609] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218264	ILMN_218264	EIF2C1	NM_153403.1	NM_153403.1		236511	23510268	NM_153403.1	Eif2c1	NP_700452.1	ILMN_2693706	001780259	S	2482	ATATCAGGGCAAAGCAATGGGCGAGACCCCCAGGCCCTGGCCAAAGCTGT	4	-	126116789-126116838	4qD2.2	Mus musculus eukaryotic translation initiation factor 2C, 1 (Eif2c1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ago1	Ago1
Mus musculus	RefSeq	ILMN_218876	ILMN_218876	PP11R	NM_008902.2	NM_008902.2		19011	142366558	NM_008902.2	Pp11r	NP_032928.1	ILMN_1238109	004780136	S	2261	GGACCCCGGGGTTTCTAATTTCAACCCCAAATGACATGTTTATTTGCACC	15	-	97541543-97541592	15qF1	Mus musculus placental protein 11 related (Pp11r), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		Tcl-30	Tcl-30
Mus musculus	Riken	ILMN_203013	ILMN_203013	COL13A1	ri|6030402F20|PX00056C01|AK031287|2410					AK031287	Col13a1		ILMN_2554071	004200437	S	2360	TGGTGACTGAGAAAATAAATTCCAGCTCTGAGAACAGCCAGCCAAGCCCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [pmid 11470398] [evidence IEP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [pmid 11470398] [evidence IEP]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217837	ILMN_327245	A630076J17RIK	XM_001478142.1	XM_001478142.1		319929	149251731	XM_001478142.1	A630076J17Rik	XP_001478192.1	ILMN_2688200	000650414	S	1084	GCTAGTGGGCCCTGGATTAAGGACTGAGCAAAGACCGGTAGAGGGCAGGA				3qF2.3	PREDICTED: Mus musculus RIKEN cDNA A630076J17 gene (A630076J17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188126	ILMN_319098	LOC100039128	XM_001472320.1	XM_001472320.1		100039128	149272562	XM_001472320.1	LOC100039128	XP_001472370.1	ILMN_2449997	004210730	S	1120	GGTGTGTTGGTTCTTGCTTTGGATTTCAGAACTGACTGTTCTAGTTGAAT	X|NT_166339.1	-	32192-32241		PREDICTED: Mus musculus similar to nucleoporin 93 (LOC100039128), mRNA.					
Mus musculus	RefSeq	ILMN_220739	ILMN_220739	GAL3ST1	NM_016922.2	NM_016922.2		53897	31980854	NM_016922.2	Gal3st1	NP_058618.2	ILMN_1258028	003830296	S	1747	GCTGTCTGGGACTAGTCTCTCTGCAGGAGAGAGCCTAACGGAGAGGTATT	11	+	3899186-3899235	11qA1	Mus musculus galactose-3-O-sulfotransferase 1 (Gal3st1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycolipid, a compound containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid [goid 9247] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The chemical reactions and pathways resulting in the formation of galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6682] [evidence IDA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate [goid 1733] [evidence IDA]	Gcst; CST	Gcst; CST
Mus musculus	RefSeq	ILMN_212864	ILMN_212864	KIF15	NM_010620.1	NM_010620.1		209737	39930324	NM_010620.1	Kif15	NP_034750.1	ILMN_1242973	004850750	S	3026	CCAGGAGTTAAGAATATCAATTGGTGAAAAATCAGAAACCATAGCCACCC	9	+	122912717-122912766	9qF4	Mus musculus kinesin family member 15 (Kif15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Knsl7; D330038N01; 3930402I10Rik; HKLP2; 3110023M17Rik	Knsl7; D330038N01; 3930402I10Rik; HKLP2; 3110023M17Rik
Mus musculus	RefSeq	ILMN_212864	ILMN_212864	KIF15	NM_010620.1	NM_010620.1		209737	39930324	NM_010620.1	Kif15	NP_034750.1	ILMN_1237163	007650538	S	1152	GCTGTGGTAAATGAAGACACCCAAGGAAATGTCAGCCAACTGCAAGCTGA	9	+	122893918-122893967	9qF4	Mus musculus kinesin family member 15 (Kif15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Knsl7; D330038N01; 3930402I10Rik; HKLP2; 3110023M17Rik	Knsl7; D330038N01; 3930402I10Rik; HKLP2; 3110023M17Rik
Mus musculus	RefSeq	ILMN_212864	ILMN_212864	KIF15	NM_010620.1	NM_010620.1		209737	39930324	NM_010620.1	Kif15	NP_034750.1	ILMN_2900557	006330114	S	4647	GTGTGCGCCACCACGGCCAGTGGGTCCTTTTCTTCTTAGATTCGCCTTTG	9	+	122927675-122927724	9qF4	Mus musculus kinesin family member 15 (Kif15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Knsl7; D330038N01; 3930402I10Rik; HKLP2; 3110023M17Rik	Knsl7; D330038N01; 3930402I10Rik; HKLP2; 3110023M17Rik
Mus musculus	RefSeq	ILMN_208712	ILMN_208712	NCOA6	NM_019825.1	NM_019825.1		56406	9790176	NM_019825.1	Ncoa6	NP_062799.1	ILMN_2749937	006560370	S	5795	ACCACATTGGTACCCTCTGAGCTCATCTCCACAGCGCCAACCACAAAAGG	2	-	155231306-155231355	2qH1	Mus musculus nuclear receptor coactivator 6 (Ncoa6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AIB3; mKIAA0181; ASC2; ASC-2; RAP250; Ncoa7; PRIP; NRC; MGC90663	AIB3; mKIAA0181; ASC2; ASC-2; RAP250; Ncoa7; PRIP; NRC; MGC90663
Mus musculus	MEEBO	ILMN_190039	ILMN_190039	2610020C11RIK	scl00320476.1_115				40254176	NM_028130	2610020C11Rik		ILMN_2466655	003120221	S	4	GCCCACTATCAGGAGATGTCGCCGTACCCAGTCTTATTTCTATTTGTTAG										
Mus musculus	MEEBO	ILMN_222349	ILMN_222349	2310001L23RIK	scl46693.9.1_8	XM_128174.2			28486826	XM_128174.2	2310001L23Rik		ILMN_2748328	002490685	S	1926	AGGTGCACAGTTCAACCCTGCTTTAACTCAAGTTCCTTGGAGAAGGGGCC										
Mus musculus	Riken	ILMN_205532	ILMN_205532	D130058C20RIK	ri|D130058C20|PX00185G17|AK051574|2419					AK051574	D130058C20Rik		ILMN_2573276	005900040	S	1741	GGCTGGAAGCAAGAGCCTTCACTGGCTGAGCTGTCTTGGGTCCTAGGGTT										
Mus musculus	Riken	ILMN_205746	ILMN_205746	A330083M20RIK	ri|A330083M20|PX00133P11|AK039673|2055					AK039673	A330083M20Rik		ILMN_2574920	004860066	S	1916	GGAAAGAGCCAGGCACAGAAGCACACAGTCGTAATCTCGGTACTCAGGAG										
Mus musculus	RefSeq	ILMN_200780	ILMN_200780	LOC385319	XM_358191.1	XM_358191.1			38086071	XM_358191.1	LOC385319		ILMN_1260301	004890187	S	469	CCCTTGCTAGCGCAGAGCACAGACAGTGAAAAGTGTGCCTTAATAGCACT										
Mus musculus	MEEBO	ILMN_187302	ILMN_187302	6430704M03RIK	scl24303.5_252				51709328	XM_131434	6430704M03Rik		ILMN_2524276	000670601	S	1549	TACTACCTGTTTGCTTGGGGTCCGGCCATTCAGGGCGCCATCACTCGTCA										
Mus musculus	RefSeq	ILMN_222898	ILMN_222898	AQP8	NM_007474.1	NM_007474.1		11833	6680713	NM_007474.1	Aqp8	NP_031500.1	ILMN_2756379	002470717	S	776	CCTTTGGACCTGCTGTGATGGCTGGCTACTGGGACTTCCATTGGATCTAC	7	+	130610138-130610187	7qF3	Mus musculus aquaporin 8 (Aqp8), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AI255744	AI255744
Mus musculus	RefSeq	ILMN_222898	ILMN_222898	AQP8	NM_007474.1	NM_007474.1		11833	6680713	NM_007474.1	Aqp8	NP_031500.1	ILMN_2854157	007160093	S	1011	GACCTGAGCTAACAGGAGTCACCATGACAGCAGCTGACCTAGGCCTGGCT	7	+	130611060-130611109	7qF3	Mus musculus aquaporin 8 (Aqp8), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AI255744	AI255744
Mus musculus	RefSeq	ILMN_214361	ILMN_214361	KHDRBS2	NM_133235.2	NM_133235.2		170771	20143979	NM_133235.2	Khdrbs2	NP_573498.1	ILMN_2647179	001740204	S	1293	ATTGCTCCCACTATTTCTTGTATTCCCTTATACTGTTAATGTGACGTGGA	1	+	32714517-32714566	1qB	Mus musculus KH domain containing, RNA binding, signal transduction associated 2 (Khdrbs2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence TAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence IDA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence IDA]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [evidence IDA]	Slm1; 6330586C16Rik; Slim1	Slm1; 6330586C16Rik; Slim1
Mus musculus	MEEBO	ILMN_191289	ILMN_191289	SCL0002352.1_15	scl0002352.1_15	AK006312.1			12839346	AK006312.1	scl0002352.1_15		ILMN_1257688	002030634	S	1	CGCTAGCTCCTGGTCACCTTTAAATAGTGCATGCCTTGCTGTGACTGCGG										
Mus musculus	Riken	ILMN_205314	ILMN_205314	C730009A15RIK	ri|C730009A15|PX00086D18|AK050055|2268					AK050055	C730009A15Rik		ILMN_1216551	001440291	S	2022	CTTCTGTCAGCAGTACGTGAGGGCTCAGGTTTTCCAAGTGCCTGCCAACA										
Mus musculus	Riken	ILMN_203376	ILMN_203376	9430088P09RIK	ri|9430088P09|PX00111C14|AK035109|1801					AK035109	9430088P09Rik		ILMN_1259133	007040300	S	1551	CTGCTGAGGAGCCAGTGAAGTCCCCACTTTTTGCACATCCTTCTCACCCC										
Mus musculus	MEEBO	ILMN_219647	ILMN_219647	1700024G13RIK	scl45745.3.1_26	XM_147820.2			28477741	XM_147820.2	1700024G13Rik		ILMN_2711761	004590088	S	444	CTAGTCTGTCCAGTCTGGAATTCTCATCTGGCTGCATAGGCACCCACAAA										
Mus musculus	RefSeq	ILMN_214074	ILMN_214074	RAI2	NM_198409.2	NM_198409.2		24004	141803061	NM_198409.2	Rai2	NP_940801.1	ILMN_1223520	004890544	S	2075	GCAGCTTTAATGGAATATTGGGTGAATCAGAGGGGTAAGAGCTATTTTCA	X	+	158217299-158217348	XqF4	Mus musculus retinoic acid induced 2 (Rai2), mRNA.				3f8	3f8
Mus musculus	RefSeq	ILMN_204973	ILMN_228705	ADAMTS6	XM_897390.2	XM_897390.2		108154	94395621	XM_897390.2	Adamts6	XP_902483.2	ILMN_1257844	004220608	S	492	GGCCACCAATGCAATTCTTTACCTCTGGCTGGGAGAGCAGGACAGTTGGC	13	+	105565999-105566048	13qD1	PREDICTED: Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 6, transcript variant 3 (Adamts6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_187763	ILMN_227755	1700109F18RIK	XM_984549.1	XM_984549.1		73429	94366616	XM_984549.1	1700109F18Rik	XP_989643.1	ILMN_2446908	002810224	S	572	AGCAAACATCCAAGATATGGAGGAGACACTAGATGTGAATTCTTATGCAG				2qC3	PREDICTED: Mus musculus RIKEN cDNA 1700109F18 gene (1700109F18Rik), mRNA.					
Mus musculus	MEEBO	ILMN_195777	ILMN_195777	D930007N19RIK	scl49892.1.1_210						D930007N19Rik		ILMN_1252593	002120202	S	17	GGTTCACCTTTCTTCTCTTCATTGAGTTCTGATTCTCTACTTAAAGGGGC										
Mus musculus	RefSeq	ILMN_217100	ILMN_217100	MAP3K7IP2	NM_138667.2	NM_138667.2		68652	133892382	NM_138667.2	Map3k7ip2	NP_619608.1	ILMN_2679094	006270753	S	3245	CCCGGGAAGAAGTGTGGCTGTCGGACTGTTGGCACAGTCATGTGTATTTA	10	-	7626096-7626145	10qA1	Mus musculus mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (Map3k7ip2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0733; Tab2; 1110030N06Rik; A530078N03Rik	mKIAA0733; Tab2; 1110030N06Rik; A530078N03Rik
Mus musculus	RefSeq	ILMN_197732	ILMN_197732	LOC381000	XM_354911.1	XM_354911.1			38077679	XM_354911.1	LOC381000		ILMN_1242666	004010364	S	2637	GCATGCACAAGGCAGTGATGGAGAAAGGTCACCCTCAAGACTTACAGACG										
Mus musculus	RefSeq	ILMN_212695	ILMN_212695	NLRP3	NM_145827.3	NM_145827.3		216799	118130221	NM_145827.3	Nlrp3	NP_665826.1	ILMN_1237471	001440184	S	3142	CCTGGGCAACAATGATCTTGGCGATCTGTGCGTGGTGACCCTCTGTGAGG	11	+	59379431-59379480	11qB1.3	Mus musculus NLR family, pyrin domain containing 3 (Nlrp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The appearance of interleukin-18 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 32621] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The intentional, virally-encoded stimulation of a host defense response to viral infection [goid 46732] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; The regulated release of interleukin-1 from a cell or group of cells. Interleukin 1 is produced mainly by activated macrophages; it stimulates thymocyte proliferation by inducing interleukin 2 release and it is involved in the inflammatory response [goid 50701] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AII/AVP; AGTAVPRL; Cias1; FCAS; Pypaf1; NALP3; MWS; FCU; Mmig1; MGC129375	AII/AVP; AGTAVPRL; Cias1; FCAS; Pypaf1; NALP3; MWS; FCU; Mmig1; MGC129375
Mus musculus	RefSeq	ILMN_200696	ILMN_200696	LOC381815	XM_355818.1	XM_355818.1			38085269	XM_355818.1	LOC381815		ILMN_1260264	003120753	S	193	GGGCTGACGGTCTGGTTGACTGTAATTTGAAAGGAGCCACTTTGCTGCTC										
Mus musculus	RefSeq	ILMN_197548	ILMN_197548	LOC381448	XM_355403.1	XM_355403.1			38076519	XM_355403.1	LOC381448		ILMN_2528515	002070072	S	184	CCTACAGTGAGATACCACACCAAGCTGACAGGACCTGTGATGCCCATCCG										
Mus musculus	Riken	ILMN_203087	ILMN_203087	DPP4	ri|A430092D23|PX00139K17|AK040409|1013					AK040409	Dpp4		ILMN_1239782	001940626	S	920	GATCTTGGTTCTGCAATTTGATGGGGGGGGGGGGGGGAGAGAATGGTTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates [goid 46581] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200077	ILMN_200077	LOC385716	XM_358921.1	XM_358921.1			38080245	XM_358921.1	LOC385716		ILMN_1253197	001230687	S	3	GGCTCAGTCATTAAGGAGCACTGCAAACAAGCCACCAGCACCACTCCCTG										
Mus musculus	Riken	ILMN_206618	ILMN_206618	E330031M19RIK	ri|E330031M19|PX00212L10|AK087858|1211					AK087858	E330031M19Rik		ILMN_2581419	005820059	S	892	GCGACATTCCGCTCGTGGGCAGGTATGTTATGTATATTCCTCAGTGACAT										
Mus musculus	RefSeq	ILMN_199750	ILMN_199750	LOC386513	XM_359362.1	XM_359362.1			38076807	XM_359362.1	LOC386513		ILMN_2536349	004390286	S	277	ACCACCTCCTTCCACTTGCAGAAAGCCTCAGTGCAAGAGTCAGACTCGGC										
Mus musculus	RefSeq	ILMN_196796	ILMN_196796	LOC209410	XM_145853.1	XM_145853.1			20839589	XM_145853.1	LOC209410		ILMN_1252943	007570445	S	600	TGGCCTCATGGTTGCTTTATTGATTGACCAAGCAGATTCGGGAAAGTGTA										
Mus musculus	RefSeq	ILMN_221017	ILMN_318816	ENSMUSG00000042857	XM_001477248.1	XM_001477248.1		328309	149264572	XM_001477248.1	ENSMUSG00000042857	XP_001477298.1	ILMN_1258722	003140079	S	866	GCTAGGAGAGAGAGGAGCAATCAGCCTCCAAACTGACCAAACGTTGGCGG				13qD1	PREDICTED: Mus musculus predicted gene, ENSMUSG00000042857 (ENSMUSG00000042857), mRNA.					
Mus musculus	RefSeq	ILMN_213296	ILMN_213296	BZRPL1	NM_027292.2	NM_027292.2		70026	142368798	NM_027292.2	Bzrpl1	NP_081568.1	ILMN_2635718	000380494	S	461	AGGGGGCTTCCGGTGGCCCCTAGCACTGCCCCTTGGTCTCTACTCTTTCC	17	-	48588403-48588452	17qC	Mus musculus benzodiazapine receptor, peripheral-like 1 (Bzrpl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC129410; MGC129411; 2510027D20Rik	MGC129410; MGC129411; 2510027D20Rik
Mus musculus	RefSeq	ILMN_199389	ILMN_199389	OLFR1225	NM_146891.1	NM_146891.1		258893	22129100	NM_146891.1	Olfr1225	NP_667102.1	ILMN_1240818	005700112	S	821	CCACAGTGTTGACCCCATTGCTCAATTCTGTAGTTTATACTTTCAGGAAT	2	-	89010497-89010546	2qE1	Mus musculus olfactory receptor 1225 (Olfr1225), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR233-11	MOR233-11
Mus musculus	RefSeq	ILMN_214656	ILMN_214656	E030030I06RIK	XM_286230.5	XM_286230.5		319887	94387933	XM_286230.5	E030030I06Rik	XP_286230.4	ILMN_1259231	002370241	S	605	AGAGTACGAGTGCTTGGCAGAGATCGGCGAAGGCCCCCGACCTGAAGAAT	10	-	21868422-21868471	10qA3	PREDICTED: Mus musculus RIKEN cDNA E030030I06 gene, transcript variant 1 (E030030I06Rik), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214656	ILMN_214656	E030030I06RIK	XM_286230.5	XM_286230.5		319887	94387933	XM_286230.5	E030030I06Rik	XP_286230.4	ILMN_1248267	002570424	S	724	GTCCGTGAGGTGGCGGTGCTGAGGCACCTGGAGACCTTAGAGCAACCCTA	10	-	21868303-21868352	10qA3	PREDICTED: Mus musculus RIKEN cDNA E030030I06 gene, transcript variant 1 (E030030I06Rik), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212657	ILMN_260261	MANBAL	NM_026968.2	NM_026968.2		69161	142352862	NM_026968.2	Manbal	NP_081244.1	ILMN_1239448	003460463	S	983	GCCTTTGACTTCAACCAGTCCTCCCCACATCTCGTATTCCCTGACCAGTG	2	+	157222399-157222448	2qH1	Mus musculus mannosidase, beta A, lysosomal-like (Manbal), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1810024K12Rik; AI836500	1810024K12Rik; AI836500
Mus musculus	RefSeq	ILMN_220391	ILMN_220391	PIB5PA	NM_172439.1	NM_172439.1		170835	27369945	NM_172439.1	Pib5pa	NP_766027.1	ILMN_3008586	001510113	S	3061	TGGAGGAAGGGGGTTTGGGGCCCTGATAGGGGAGGCAGACGGCCTAGACA	11	-	3394637-3394662:3394663-3394686	11qA1	Mus musculus phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A (Pib5pa), mRNA.				Pipp	Pipp
Mus musculus	RefSeq	ILMN_227581	ILMN_227581	OLFR142	NM_146984.1	NM_146984.1		406186	22208851	NM_146984.1	Olfr142	NP_667195.1	ILMN_3000484	006770243	S	659	TAATCAGCTTGAGGAAGCGTTCTGCAGAGGGGAGGCGCAAGGCTCTCTCC	2	-	90092435-90092484	2qE1	Mus musculus olfactory receptor 142 (Olfr142), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	K20; MOR227-2	K20; MOR227-2
Mus musculus	RefSeq	ILMN_211637	ILMN_211637	SYT15	NM_181529.3	NM_181529.3		319508	141802005	NM_181529.3	Syt15	NP_852682.1	ILMN_1240237	002680039	S	2289	GACGGGAGCGTTATCTGTGCCTCTTTAGGTCCACTTCTAATGGCTATCAG	14	+	35042272-35042321	14qB	Mus musculus synaptotagmin XV (Syt15), transcript variant a, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]			sytXV; E230025K04Rik; CHR10SYT	sytXV; E230025K04Rik; CHR10SYT
Mus musculus	RefSeq	ILMN_211637	ILMN_211637	SYT15	NM_181529.3	NM_181529.3		319508	141802005	NM_181529.3	Syt15	NP_852682.1	ILMN_1219148	004920040	S	2927	GAGAACCCTCTGACAAATGTAGGTTATTCAACTTTCAATCCGTTAGCATG	14	+	35042910-35042959	14qB	Mus musculus synaptotagmin XV (Syt15), transcript variant a, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]			sytXV; E230025K04Rik; CHR10SYT	sytXV; E230025K04Rik; CHR10SYT
Mus musculus	RefSeq	ILMN_219114	ILMN_219114	CHCHD1	NM_025366.2	NM_025366.2		66121	142365360	NM_025366.2	Chchd1	NP_079642.1	ILMN_1228231	000610392	S	408	CAGAGAGGCACGTTTGGGAGGTTTGCGGTTTGCATTTGCATTGCTACGAG	14	+	21523502-21523551	14qA3	Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 1 (Chchd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC106657; 1110001O19Rik; 2400010G13Rik	MGC106657; 1110001O19Rik; 2400010G13Rik
Mus musculus	MEEBO	ILMN_191745	ILMN_191745	TPTE	scl000667.1_1	NM_199258.1			40549441	NM_199258.1	Tpte		ILMN_1249754	004880753	S	1	CGGTCTGAGTTATAATGCATTTTGGGAACATAAATAGCACTAATTGGTTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]				
Mus musculus	RefSeq	ILMN_186910	ILMN_186910	TOX	NM_145711.3	NM_145711.3		252838	142371997	NM_145711.3	Tox	NP_663757.2	ILMN_1257547	005690424	S	2115	CTGGGGTAAACGGTCCTGGGTTTTCCATTGGTTTTCATAATGGGTGTTTA	4	-	6615220-6615269	4qA1	Mus musculus thymocyte selection-associated high mobility group box (Tox), mRNA. XM_919293 XM_919306	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1700007F02Rik; KIAA0808	1700007F02Rik; KIAA0808
Mus musculus	RefSeq	ILMN_199563	ILMN_199563	LOC382733	XM_356646.1	XM_356646.1			38074361	XM_356646.1	LOC382733		ILMN_1251036	005220411	S	1171	CATGTTTGCACAGTGCTGACTTTCTCAGTCATTAATGTGGTGCCCCCTCC										
Mus musculus	RefSeq	ILMN_199915	ILMN_239730	EG665983	XM_980711.1	XM_980711.1		665983	94372615	XM_980711.1	EG665983	XP_985805.1	ILMN_1232584	004150102	S	504	AGGTCCTCTTTGGAGCTTGACCCCGTGCTGAACAGATGAGATCAGTCATC	4	+	141902125-141902174	4qE1	PREDICTED: Mus musculus predicted gene, EG665983 (EG665983), mRNA.					
Mus musculus	RefSeq	ILMN_213907	ILMN_213907	C530028O21RIK	NM_175696.3	NM_175696.3		319352	142352542	NM_175696.3	C530028O21Rik	NP_783627.1	ILMN_2642091	000630475	S	1451	CTCGTGTTGCCTATGTCCTGCCCCCTTTACATTCTCTGTGCCCATCTCAG	6	+	124952341-124952390	6qF2	Mus musculus RIKEN cDNA C530028O21 gene (C530028O21Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU067746; AI255183	AU067746; AI255183
Mus musculus	RefSeq	ILMN_208891	ILMN_208891	ALDH7A1	NM_138600.3	NM_138600.3		110695	146149126	NM_138600.3	Aldh7a1	NP_613066.1	ILMN_2590532	006840372	S	2784	GGTGTGGAAAGATTTGGACAATAGTAAGAAATCTGGGGGACTGACAGTGT				18qD3	Mus musculus aldehyde dehydrogenase family 7, member A1 (Aldh7a1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-2-aminoadipate 6-semialdehyde + NADP+ + H2O = L-2-aminoadipate + NADPH + H+ [goid 4043] [evidence IEA]	Atq1; D18Wsu181e	Atq1; D18Wsu181e
Mus musculus	RefSeq	ILMN_203852	ILMN_223116	CLEC9A	NM_172732.2	NM_172732.2		232414	121674802	NM_172732.2	Clec9a	NP_766320.2	ILMN_1239591	003400437	S	382	TACTGCAGAGATCTCTCCATTCAGGTAGTGACTGCAGCCCTTGTCCACAC	6	+	129365356-129365379:129369500-129369525	6qF3	Mus musculus C-type lectin domain family 9, member a (Clec9a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	9830005G06Rik	9830005G06Rik
Mus musculus	RefSeq	ILMN_223116	ILMN_223116	CLEC9A	NM_172732.2	NM_172732.2		232414	121674802	NM_172732.2	Clec9a	NP_766320.2	ILMN_2929768	003890019	S	850	AGAGGCCAAAGAGCAAACACAGGAGGAGATTGATGTGAGACTATGAAGGC	6	+	129372417-129372466	6qF3	Mus musculus C-type lectin domain family 9, member a (Clec9a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	9830005G06Rik	9830005G06Rik
Mus musculus	RefSeq	ILMN_197434	ILMN_311213	EG329521	XM_001480655.1	XM_001480655.1		329521	149249649	XM_001480655.1	EG329521	XP_001480705.1	ILMN_1228887	004390091	S	309	GATTCTGCAGGTTCCCAAGCTGAAGGCCCTATGTCCGTTCCAAGGGCTGG				2qF2	PREDICTED: Mus musculus predicted gene, EG329521 (EG329521), mRNA.					
Mus musculus	RefSeq	ILMN_221545	ILMN_229313	LCE1A1	NM_025984.2	NM_025984.2		67127	114842380	NM_025984.2	Lce1a1	NP_080260.1	ILMN_1234820	006650730	S	627	TGTGAAATGTTTTAAATGTTCCCCTATTGCTGGGTTTGTCTTCTTGGGGA	3	-	92450485-92450534	3qF1	Mus musculus late cornified envelope 1A1 (Lce1a1), mRNA.				2200008B06Rik; Sprrl3	2200008B06Rik; Sprrl3
Mus musculus	RefSeq	ILMN_256482	ILMN_256482	4932411G14RIK	NM_177711.2	NM_177711.2		238663	31343233	NM_177711.2	4932411G14Rik	NP_808379.1	ILMN_2997695	000580370	S	3586	TTTACAGCCTCGCCCATCCGCGTCCCACAGAGAGTCAGAAGCTGCGCCAA	13	-	59735739-59735788	13qB2	Mus musculus RIKEN cDNA 4932411G14 gene (4932411G14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217237	ILMN_217237	FIGN	NM_021716.3	NM_021716.3		60344	141802431	NM_021716.3	Fign	NP_068362.1	ILMN_2680673	005390242	S	2913	CATTCTGCTGTTCTCGAGATTTAGTTGCTGTCAAGTGCCTGGAGTGGTGC	2	-	63816330-63816379	2qC1.3	Mus musculus fidgetin (Fign), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	fidget; fi	fidget; fi
Mus musculus	RefSeq	ILMN_199693	ILMN_231196	LOC633072	XR_002555.1	XR_002555.1		633072	94370533	XR_002555.1	LOC633072		ILMN_1218836	003940681	S	1876	GGCGAGGGCTATGGAAGGCAGATAGATGTGTGGAGCCTCGTCTATACTGA				3qA1	PREDICTED: Mus musculus similar to Mitogen-activated protein kinase kinase kinase 3 (MAPK/ERK kinase kinase 3) (MEK kinase 3) (MEKK 3) (LOC633072), mRNA.					
Mus musculus	RefSeq	ILMN_200372	ILMN_320512	LOC100048500	XM_001480545.1	XM_001480545.1		100048500	149268027	XM_001480545.1	LOC100048500	XP_001480595.1	ILMN_1218825	006020544	S	1069	ATTGCCCACCGGTGTTGACGGTGTTGCAGAACTCCAGAGAGGCAATGAGG					PREDICTED: Mus musculus hypothetical protein LOC100048500 (LOC100048500), mRNA.					
Mus musculus	RefSeq	ILMN_217796	ILMN_217796	HSD17B2	NM_008290.2	NM_008290.2		15486	123173869	NM_008290.2	Hsd17b2	NP_032316.2	ILMN_1213811	007320753	S	950	CGTCCATACACAGAAGCTCATCATCCCGACCTTGAAAGAGAGGTCCAACC	8	+	120282599-120282648	8qE1	Mus musculus hydroxysteroid (17-beta) dehydrogenase 2 (Hsd17b2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]; Catalysis of the reaction: testosterone + NAD+ = androst-4-ene-3,17-dione + NADH [goid 50327] [evidence IEA]	AI194967	AI194967
Mus musculus	RefSeq	ILMN_186387	ILMN_186387	V1RD3	NM_030740.1	NM_030740.1		81015	13507703	NM_030740.1	V1rd3	NP_109665.1	ILMN_2435096	002630050	S	1631	ATTATGTCATCTATAAATAGTGATACTTTGAATACTTCTTTCCAATTTGT	7	-	5146669-5146718	7qA1	Mus musculus vomeronasal 1 receptor, D3 (V1rd3), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	V3R3	V3R3
Mus musculus	RefSeq	ILMN_186387	ILMN_186387	V1RD3	NM_030740.1	NM_030740.1		81015	13507703	NM_030740.1	V1rd3	NP_109665.1	ILMN_1257296	000130110	S	743	CCACCAGAGAATGCACTATATACATAATCATAACCATAAAAACACAGGCC	7	-	5147557-5147606	7qA1	Mus musculus vomeronasal 1 receptor, D3 (V1rd3), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	V3R3	V3R3
Mus musculus	RefSeq	ILMN_184960	ILMN_243465	D14ERTD449E	NM_025311.1	NM_025311.1		66039	21313631	NM_025311.1	D14Ertd449e	NP_079587.1	ILMN_2693858	000240373	S	735	GGCTAAAACACACTAGATTTATTTGTGGGTGCACCTATGCTCTGTGTGGT	14	-	26743939-26743988	14qA3	Mus musculus DNA segment, Chr 14, ERATO Doi 449, expressed (D14Ertd449e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA960404; 0610010A22Rik; 0610008K04Rik	AA960404; 0610010A22Rik; 0610008K04Rik
Mus musculus	RefSeq	ILMN_190724	ILMN_260638	C530025M09RIK	XM_918187.2	XM_918187.2		319470	94366953	XM_918187.2	C530025M09Rik	XP_923280.1	ILMN_1236593	002680671	S	2700	GGATCCCAACTGTCTCTGTGTTACCTCCAAATAGAACAATGGCCTCCAGG				2qG3	PREDICTED: Mus musculus RIKEN cDNA C530025M09 gene (C530025M09Rik), mRNA.					
Mus musculus	Riken	ILMN_203342	ILMN_203342	5031404C24RIK	ri|5031404C24|PX00037M10|AK030278|2558					AK030278	5031404C24Rik		ILMN_2556572	001660348	S	2459	CCACCTGTTAAGGAGGCTAAGGCAGGAGAATTACAAATTCAGGGTCTGCC										
Mus musculus	Riken	ILMN_205187	ILMN_205187	D030014N20RIK	ri|D030014N20|PX00178J22|AK050746|869					AK050746	D030014N20Rik		ILMN_1216216	001450687	S	447	GCTATGGGAGGTCTTTATCTGGAGTGCCTGTCTGCTGATACCATCTCTCC										
Mus musculus	MEEBO	ILMN_186816	ILMN_186816	ROBO4	scl37116.17_570				27229186	NM_028783	Robo4		ILMN_2438741	002470047	S	20	AGAAGTACCCTCTGCAGACACCCTCTGGGAAGGAGTCGGGGCAATGAAAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186816	ILMN_186816	ROBO4	scl37116.17_570				27229186	NM_028783	Robo4		ILMN_1219026	006760332	S	321	CAGGGACGGCCACAAGATGACCAGAACATCCTCTCAGCAATCCTGGGTGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213691	ILMN_213691	OLFR1457	NM_146575.1	NM_146575.1		258568	22129494	NM_146575.1	Olfr1457	NP_666786.1	ILMN_2639730	001340709	S	620	GTATATTTTTTGCTCTCTTGGTTATTTGTATATCCTACATATTCATTTTT	19	-	13169467-13169516	19qA	Mus musculus olfactory receptor 1457 (Olfr1457), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-20	MOR202-20
Mus musculus	RefSeq	ILMN_211998	ILMN_227109	LOC621823	XM_886229.2	XM_886229.2		621823	94390068	XM_886229.2	LOC621823	XP_891322.1	ILMN_2621596	002100497	S	775	GACAACTATTTCCAAGTACTTCTCAGAACGAGGGGATGCTGTAGCCAAGG	11	-	48789009-48789058	11qB1.2	PREDICTED: Mus musculus similar to Proteasome activator complex subunit 2 (Proteasome activator 28-beta subunit) (PA28beta) (PA28b) (Activator of multicatalytic protease subunit 2) (11S regulator complex beta subunit) (REG-beta) (LOC621823), mRNA.					
Mus musculus	RefSeq	ILMN_213586	ILMN_213586	DHRS7	NM_025522.1	NM_025522.1		66375	21313491	NM_025522.1	Dhrs7	NP_079798.1	ILMN_2939702	003450189	S	786	GAAACAACATAGACCAGAGTTACAAGATGCCAACGAGCCGCTGTGTGCGG	12	-	73571230-73571279	12qC3	Mus musculus dehydrogenase/reductase (SDR family) member 7 (Dhrs7), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	retDSR4; 5730564L20Rik; AW061210; retSDR4; 2310016E22Rik	retDSR4; 5730564L20Rik; AW061210; retSDR4; 2310016E22Rik
Mus musculus	RefSeq	ILMN_185554	ILMN_185554	UBQLN2	NM_018798.2	NM_018798.2		54609	34328235	NM_018798.2	Ubqln2	NP_061268.2	ILMN_2428009	001780538	S	2808	CTCTGAGCAGAATATGTGTAACCAAAATAAGAAAGAATATAAGAAATATT	X	+	149935582-149935631	XqF3	Mus musculus ubiquilin 2 (Ubqln2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		Chap1; Plic-2; Plic2; HRIHFB2157; Dsk2	Chap1; Plic-2; Plic2; HRIHFB2157; Dsk2
Mus musculus	RefSeq	ILMN_185554	ILMN_185554	UBQLN2	NM_018798.2	NM_018798.2		54609	34328235	NM_018798.2	Ubqln2	NP_061268.2	ILMN_2480371	004180445	S	3148	CTTCATATGCATTTTGATTTGTAATTGGAAATGTAACTTTTACTGGAAGT	X	+	149935922-149935971	XqF3	Mus musculus ubiquilin 2 (Ubqln2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		Chap1; Plic-2; Plic2; HRIHFB2157; Dsk2	Chap1; Plic-2; Plic2; HRIHFB2157; Dsk2
Mus musculus	RefSeq	ILMN_187609	ILMN_185554	UBQLN2	NM_018798.2	NM_018798.2		54609	34328235	NM_018798.2	Ubqln2	NP_061268.2	ILMN_2445597	001780270	S	2265	TTAGATTTATAGGTAGACAGATTTAAAAGAATCAAAATAAAAGTAAAGCA	X	+	149935039-149935088	XqF3	Mus musculus ubiquilin 2 (Ubqln2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		Chap1; Plic-2; Plic2; HRIHFB2157; Dsk2	Chap1; Plic-2; Plic2; HRIHFB2157; Dsk2
Mus musculus	RefSeq	ILMN_185554	ILMN_185554	UBQLN2	NM_018798.2	NM_018798.2		54609	34328235	NM_018798.2	Ubqln2	NP_061268.2	ILMN_2435106	003420136	S	2219	TTTACTTTTATTTTGATTCTTTTAAATCTGTCTACCTATAAATCTAATAG	X	+	149934993-149935042	XqF3	Mus musculus ubiquilin 2 (Ubqln2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		Chap1; Plic-2; Plic2; HRIHFB2157; Dsk2	Chap1; Plic-2; Plic2; HRIHFB2157; Dsk2
Mus musculus	RefSeq	ILMN_192226	ILMN_185554	UBQLN2	NM_018798.2	NM_018798.2		54609	34328235	NM_018798.2	Ubqln2	NP_061268.2	ILMN_2486128	003830471	S	2855	TATTTCTTATATTCTTTCTTATTTTGGTTACACATATTCTGCTCAGAGAT	X	+	149935629-149935678	XqF3	Mus musculus ubiquilin 2 (Ubqln2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		Chap1; Plic-2; Plic2; HRIHFB2157; Dsk2	Chap1; Plic-2; Plic2; HRIHFB2157; Dsk2
Mus musculus	MEEBO	ILMN_194142	ILMN_194142	1110011C06RIK	scl068494.1_129						1110011C06Rik		ILMN_2503787	007650255	S	4	GCAGTGGGATGGAACTGTGTGATTGCTCTTAGGTGAGTTCCGAGTCTTAA										
Mus musculus	MEEBO	ILMN_186966	ILMN_186966	4732496O19RIK	scl21721.22_329				19527073	NM_133853	4732496O19Rik		ILMN_2485857	003840270	S	4	GACGGCGGCGCCCCTCTGGCCGGGCTGTGCGCGGGGCCCGGAGCGGCACC										
Mus musculus	RefSeq	ILMN_213450	ILMN_255152	FPGT	NM_029330.2	NM_029330.2		75540	117676388	NM_029330.2	Fpgt	NP_083606.2	ILMN_2637156	006620253	S	2823	CAGAACTCAGTTGTCTGCTCAGGAGGTGGTAGGGATAGTTGAGAGCCAGT	3	-	154748502-154748551	3qH4	Mus musculus fucose-1-phosphate guanylyltransferase (Fpgt), mRNA. XM_982638 XM_982682 XM_982713 XM_992933	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	The chemical reactions and pathways resulting in the formation of GDP-L-fucose, a substance composed of L-fucose in glycosidic linkage with guanosine diphosphate [goid 42350] [evidence ISO]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: L-fucose 1-phosphate + GTP = guanosine diphosphate fucose + diphosphate [goid 47341] [evidence ISO]	MGC129333; 1700016E03Rik	MGC129333; 1700016E03Rik
Mus musculus	MEEBO	ILMN_216800	ILMN_216800	RPP38	scl19751.3.1_19	XM_130010.3			38074425	XM_130010.3	Rpp38		ILMN_2675514	000450332	S	589	AGCGAGAGAATTGCTCCTGTCATTGGCTTAAAATGTGTGCTAGCCTTGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186137	ILMN_186137	4933421E11RIK	scl0001942.1_257				31343309	NM_177309	4933421E11Rik		ILMN_1244986	006350722	S	20	TAAGTAAAATTTTATCCATATCGTTGACTATTTGTGCCTTAAACTTAAGA										
Mus musculus	RefSeq	ILMN_209872	ILMN_209872	EXOC4	NM_009148.3	NM_009148.3		20336	118130512	NM_009148.3	Exoc4	NP_033174.2	ILMN_1222773	004490315	S	3018	GCTCCATCTACACTGAGGCTTAGTGGGTAGGCGGTGGATTATTTTCTCTT	6	+	33922238-33922287	6qA3.3	Mus musculus exocyst complex component 4 (Exoc4), mRNA.	A protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals [goid 145] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]	Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IPI]	C78892; Sec8l1; Sec8	C78892; Sec8l1; Sec8
Mus musculus	MEEBO	ILMN_186600	ILMN_186600	GAS2	scl9056.1.1_177				6679942	NM_008087	Gas2		ILMN_2512191	001260228	S	5	TGGCTGTGTAGACTACCTTCATGTGGGGAAGGTAAATGTAGGTGGTGTTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]			
Mus musculus	MEEBO	ILMN_186600	ILMN_186600	GAS2	scl9056.1.1_177				6679942	NM_008087	Gas2		ILMN_1225563	000780632	S	7	GAGTTATTTCTTATGCCAAGTTCATCTTACCTGGCACAAAGGCTGTAGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]			
Mus musculus	Riken	ILMN_205498	ILMN_205498	D130026O08RIK	ri|D130026O08|PX00183I24|AK051262|2483					AK051262	D130026O08Rik		ILMN_2573020	007000280	S	489	TCCTGGAAATCTGGGGCAGGTTATGGTACTCCCAGGGTGACTTCTTTTGC										
Mus musculus	RefSeq	ILMN_215692	ILMN_215692	E2F2	NM_177733.4	NM_177733.4		242705	146198797	NM_177733.4	E2f2	NP_808401.1	ILMN_1248842	003780053	S	1372	ATTCCTGACTGCGCTCAGCCGGGCTGCAGCACTGACTCTGGGATCGCAGA				4qD3	Mus musculus E2F transcription factor 2 (E2f2), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	E130207A07	E130207A07
Mus musculus	RefSeq	ILMN_198900	ILMN_198900	LOC212728	XM_134604.2	XM_134604.2			38089519	XM_134604.2	LOC212728		ILMN_1231056	004780187	S	4406	CTGCAGAGCAGTGGCTTCCTCTGGTGGAGGTGAGACCATCCCAGCTGATG										
Mus musculus	RefSeq	ILMN_220913	ILMN_220913	LRRC18	NM_026253.3	NM_026253.3		67580	55742873	NM_026253.3	Lrrc18	NP_080529.1	ILMN_2728504	005860088	S	2180	GATTGCACATGAGGATTACGGTGGCACTCACATGAATCTGGGCACAAGGC	14	+	33828088-33828137	14qB	Mus musculus leucine rich repeat containing 18 (Lrrc18), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MTLR1; 4930442L21Rik	MTLR1; 4930442L21Rik
Mus musculus	RefSeq	ILMN_197832	ILMN_197832	LOC332931	XM_285823.2	XM_285823.2			38078695	XM_285823.2	LOC332931		ILMN_1248987	005820592	S	604	CACATCCTCTGTCTGGATACTGGGGCCATGAGCAGCATAGTCCTACCTGC										
Mus musculus	RefSeq	ILMN_216016	ILMN_216016	F2RL2	NM_010170.4	NM_010170.4		14064	153791953	NM_010170.4	F2rl2	NP_034300.3	ILMN_1236465	000650608	S	2070	CCTGTCCAGCTTTTCAAGTCGTTAAAGGCCCGTTCTTCCCTTATTCTCAA				13qD1	Mus musculus coagulation factor II (thrombin) receptor-like 2 (F2rl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with thrombin to initiate a change in cell activity [goid 15057] [evidence IEA]	F730031A08; PAR3	F730031A08; PAR3
Mus musculus	MEEBO	ILMN_189546	ILMN_189546	9845300_2519	9845300_2519						9845300_2519		ILMN_2462266	004200408	S	19	CGTTGCAGGTGACCTTGAGCGCCAGCTGCTGCTTGTCCATGAACATCCGC										
Mus musculus	RefSeq	ILMN_185662	ILMN_230605	4631426J05RIK	NM_029935.4	NM_029935.4		77590	146149298	NM_029935.4	4631426J05Rik	NP_084211.2	ILMN_1239627	002570435	S	4185	CCTTCGCCTGTCATTTCCAGGACATATCTTACTGCCCCACACCAACCACG				7qF3	Mus musculus RIKEN cDNA 4631426J05 gene (4631426J05Rik), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reactions: 3'-phosphoadenylyl sulfate + dermatan = adenosine 3',5'-bisphosphate + dermatan 6'-sulfate and 3'-phosphoadenylyl sulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 6'-sulfate [goid 50659] [evidence IEA]	BRAG; GalNAcS-6ST; mKIAA0598	BRAG; GalNAcS-6ST; mKIAA0598
Mus musculus	RefSeq	ILMN_222166	ILMN_222166	TCFEB	NM_011549.2	NM_011549.2		21425	40538818	NM_011549.2	Tcfeb	NP_035679.2	ILMN_2939434	000580050	S	1888	CTCTGGCGGCAGTACTATGACTATGATGGGGAAGAACAGGGGTGAGGCAG	17	+	47928980-47929029	17qC	Mus musculus transcription factor EB (Tcfeb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	TFEB	TFEB
Mus musculus	RefSeq	ILMN_222166	ILMN_222166	TCFEB	NM_011549.2	NM_011549.2		21425	40538818	NM_011549.2	Tcfeb	NP_035679.2	ILMN_1235592	006100390	S	1494	GACAGAGCACGGCTCCCCATTCCCCAACCTGTCCAAGAAGGATCTGGACT	17	+	47928586-47928635	17qC	Mus musculus transcription factor EB (Tcfeb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	TFEB	TFEB
Mus musculus	Riken	ILMN_202593	ILMN_202593	5730594E03RIK	ri|5730594E03|PX00093I02|AK019988|750					AK019988	5730594E03Rik		ILMN_1225433	005090370	S	148	GTGGGGTGTGGGGTGAAGGCTTGGCAGTTCAGAAGAAAGTGTCCCCAGAT										
Mus musculus	RefSeq	ILMN_208761	ILMN_208761	ADAP2	NM_172133.1	NM_172133.1		216991	26006858	NM_172133.1	Adap2	NP_742145.1	ILMN_2589256	005390255	S	1318	CCAGGGTGTGGTTGATCCTACGACTCCCCGTGCTCCTTCCAGCAAACTCT	11	+	79992050-79992099	11qB5	Mus musculus ArfGAP with dual PH domains 2 (Adap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence NAS]; A series of molecular signals in which a cell uses an inositol lipid to convert an extracellular signal into a response [goid 48017] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with phosphatidylinositol-3,4,5-triphosphate, the triphosphorylated derivative of phosphatidylinositol [goid 5547] [evidence ISO]		
Mus musculus	MEEBO	ILMN_192065	ILMN_192065	IQGAP1	scl31120.39_351				7710041	NM_016721	Iqgap1		ILMN_1239333	004830538	S	19	GCGGTATGTCCCTATTACAAATGTAAGTCTTGGAGAAGGGTCCTTCATGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The area of a motile cell closest to the direction of movement [goid 31252] [evidence IGI]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IGI]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Ras superfamily [goid 5099] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192065	ILMN_192065	IQGAP1	scl31120.39_351				7710041	NM_016721	Iqgap1		ILMN_2654495	003830377	S	6028	CTGGACCCTTAGGCTCTGACTAACAAAGACAGTTCAGCTCCAGACACTGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The area of a motile cell closest to the direction of movement [goid 31252] [evidence IGI]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IGI]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Ras superfamily [goid 5099] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_212667	ILMN_212667	COL12A1	scl0003592.1_52	NM_007730.1			6680959	NM_007730.1	Col12a1		ILMN_2778277	007210609	S	9624	GCTGAAAATATATATGAAAATTATTTCTGCAATCCAATCTACATATAATA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218296	ILMN_218296	MMEL1	NM_013783.1	NM_013783.1		27390	7305476	NM_013783.1	Mmel1	NP_038811.1	ILMN_1253943	005090088	S	2515	TGAGGCATTCCACTGCCCACGAGGCAGCCCCATGCACCCCATGAAGCGAT	4	+	154269268-154269317	4qE2	Mus musculus membrane metallo-endopeptidase-like 1 (Mmel1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	NEPII; Mell1; Nl1; NEP2; SEP	NEPII; Mell1; Nl1; NEP2; SEP
Mus musculus	Riken	ILMN_202639	ILMN_202639	GPM6B	ri|8030496P19|PX00093D15|AK020224|2257					AK020224	Gpm6b		ILMN_1252255	002480307	S	1933	GATCAGAGAGGCAGGTTATGGCAAAGCAAGAAACCTCTGTTGATGGCCTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_187623	ILMN_239985	ARMC1	NM_028840.2	NM_028840.2		74252	31542136	NM_028840.2	Armc1	NP_083116.1	ILMN_2706568	000650196	S	2186	AGACATACACTTGTGTTTTTCTTTAAGACTGAAGTACACGTATGCGATGC	3	-	19033882-19033931	3qA2	Mus musculus armadillo repeat containing 1 (Armc1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	3110009G21Rik; 2900046P06Rik; C330014L16Rik; AW048872; Arcp; AA409258; 2310016N05Rik	3110009G21Rik; 2900046P06Rik; C330014L16Rik; AW048872; Arcp; AA409258; 2310016N05Rik
Mus musculus	RefSeq	ILMN_214551	ILMN_225652	CGN	XM_001001375.2	XM_001001375.2		70737	149251313	XM_001001375.2	Cgn	XP_001001375.2	ILMN_2649148	000020092	S	5169	AGAAGATATTCTGCAAATCAGATATTTTCTCCCAATCCAGCCTTGGTTTA	3	-	94564029-94564078	3qF2.1	PREDICTED: Mus musculus cingulin (Cgn), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence NAS]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214551	ILMN_225652	CGN	XM_001001375.2	XM_001001375.2		70737	149251313	XM_001001375.2	Cgn	XP_001001375.2	ILMN_2737856	006860079	S	2060	GGCATTGGCAGAGCATGTTCCAGAAGAACAAGGAAGAGCTGAGAGCCACC	3	-	94577426-94577475	3qF2.1	PREDICTED: Mus musculus cingulin (Cgn), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence NAS]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209378	ILMN_209378	RHBDD3	NM_177370.3	NM_177370.3		279766	141801239	NM_177370.3	Rhbdd3	NP_796344.1	ILMN_2595266	000840692	S	1441	GAAGGGATCCAGGCCTCCCTTCTTGATGTGTCAGTTCAGGGTTCCCAGAG	11	+	5000430-5000479	11qA1	Mus musculus rhomboid domain containing 3 (Rhbdd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Ptag; 5730411O18Rik; RP23-338J18.2	Ptag; 5730411O18Rik; RP23-338J18.2
Mus musculus	RefSeq	ILMN_199738	ILMN_199738	LOC382949	XM_356764.1	XM_356764.1			38076690	XM_356764.1	LOC382949		ILMN_2536303	004070039	S	289	GCCAGCAAGTGTACTGCTCTCTACATGGATGGTGAGGGTGAGAATGAGGG										
Mus musculus	Riken	ILMN_202969	ILMN_202969	A430016A09RIK	ri|A430016A09|PX00134A10|AK039835|830					AK039835	A430016A09Rik		ILMN_2553711	004120592	S	374	GACACAGGATGGGCTGTACTGGTTGAAATTGCCTTGGTTCTGGGCTGGCC										
Mus musculus	RefSeq	ILMN_206180	ILMN_317690	LOC100040520	XM_001474152.1	XM_001474152.1		100040520	149272253	XM_001474152.1	LOC100040520	XP_001474202.1	ILMN_1239832	006330202	S	404	GGCTACACTCAAAGTGGATGGAAGAGGTAGCAATGGTTCATTTGGCACAG	X	+	131280437-131280486	XqE3	PREDICTED: Mus musculus hypothetical protein LOC100040520 (LOC100040520), mRNA.					
Mus musculus	RefSeq	ILMN_197214	ILMN_197214	LOC381359	XM_355325.1	XM_355325.1			38074612	XM_355325.1	LOC381359		ILMN_2527320	002030221	S	766	AGCAACCTGCGCTCGCACATGCGTATCCACACGCTGGACAAGCCCTTCGT										
Mus musculus	MEEBO	ILMN_189626	ILMN_189626	2810002D19RIK	scl20591.2_670						2810002D19Rik		ILMN_2462920	006040564	S	15	CAGATGGCTTTTAAGACTGACCTTGACAACAGAGCATACCATATGAGAAG										
Mus musculus	RefSeq	ILMN_219548	ILMN_219548	OLFR1448	NM_146701.1	NM_146701.1		258696	22129438	NM_146701.1	Olfr1448	NP_666912.1	ILMN_2710322	003420541	S	557	CGTGCTCAGACACCTATATCAGTGAGACTGTGATTTTCTTTGTTGTGGGT	19	-	12994191-12994240	19qA	Mus musculus olfactory receptor 1448 (Olfr1448), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-5	MOR202-5
Mus musculus	RefSeq	ILMN_188970	ILMN_260431	FZD5	NM_022721.3	NM_022721.3		14367	111160874	NM_022721.3	Fzd5	NP_073558.2	ILMN_2591703	006620471	S	2674	GGGGGCAGTTGTTTCGCTTGGTAGCTTTGTGAAGGTCACTTCCGTTTACC	1	-	64781322-64781371	1qC2	Mus musculus frizzled homolog 5 (Drosophila) (Fzd5), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC141642; AI427138; Fz5; 5330434N09Rik	MGC141642; AI427138; Fz5; 5330434N09Rik
Mus musculus	RefSeq	ILMN_262102	ILMN_260431	FZD5	NM_022721.3	NM_022721.3		14367	111160874	NM_022721.3	Fzd5	NP_073558.2	ILMN_3161263	006620519	S	6478	GAATCACCACCGGCATGCCACATCCAGTACTCAGAACTCAGAGCCAGCAA	1	-	64777518-64777567	1qC2	Mus musculus frizzled homolog 5 (Drosophila) (Fzd5), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC141642; AI427138; Fz5; 5330434N09Rik	MGC141642; AI427138; Fz5; 5330434N09Rik
Mus musculus	RefSeq	ILMN_215924	ILMN_215924	LOXL3	NM_013586.4	NM_013586.4		16950	146134455	NM_013586.4	Loxl3	NP_038614.2	ILMN_2665272	005270707	S	3570	GTTCCGAAGAAACGGCAAGCTGTCTGGAAGGATAACGAGATGGGTGGGAA				6qC3	Mus musculus lysyl oxidase-like 3 (Loxl3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + H2O2 [goid 4720] [evidence IEA]	Lor2; Loxl2	Lor2; Loxl2
Mus musculus	RefSeq	ILMN_217878	ILMN_256937	PLEC1	NM_011117.1	NM_011117.1		18810	41322903	NM_011117.1	Plec1	NP_035247.1	ILMN_2699546	001070400	S	97	CTGCCCTGGAACCTTGGGAAAACACAGAGAAGTCGGCGAAGTGGAGGTGG	15	-	76061662-76061711	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; AA591047; AU042537; PLTN; PCN	EBS1; AA591047; AU042537; PLTN; PCN
Mus musculus	RefSeq	ILMN_256937	ILMN_256937	PLEC1	NM_011117.1	NM_011117.1		18810	41322903	NM_011117.1	Plec1	NP_035247.1	ILMN_3062404	007050653	I	6	CATGTCAGGGGAGGATTCTGAGGTCCGGCCAGTGGCAGTGGCTGAAGGTA	15	-	76061753-76061802	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; AA591047; AU042537; PLTN; PCN	EBS1; AA591047; AU042537; PLTN; PCN
Mus musculus	RefSeq	ILMN_210244	ILMN_210244	EHMT1	NM_172545.2	NM_172545.2		77683	142369397	NM_172545.2	Ehmt1	NP_766133.1	ILMN_2633604	003060446	S	1691	GCGTGGTCAAGTATGAGCTGATGCGCCCATCCAACAAAGCACCGCTCTTG	2	-	24696187-24696236	2qA3	Mus musculus euchromatic histone methyltransferase 1 (Ehmt1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	mKIAA1876; 9230102N17Rik; D330003E03; Eu-HMTase1	mKIAA1876; 9230102N17Rik; D330003E03; Eu-HMTase1
Mus musculus	RefSeq	ILMN_210244	ILMN_210244	EHMT1	NM_172545.2	NM_172545.2		77683	142369397	NM_172545.2	Ehmt1	NP_766133.1	ILMN_2757855	000130521	S	770	CAACCTTCCCAGCCCTCCACCAGTCGCTACCTCAGAATCAGTGCTACATG	2	-	24719428-24719449:24732975-24733002	2qA3	Mus musculus euchromatic histone methyltransferase 1 (Ehmt1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	mKIAA1876; 9230102N17Rik; D330003E03; Eu-HMTase1	mKIAA1876; 9230102N17Rik; D330003E03; Eu-HMTase1
Mus musculus	RefSeq	ILMN_200604	ILMN_200604	LOC381776	XM_355775.1	XM_355775.1			38084237	XM_355775.1	LOC381776		ILMN_2539343	003360687	S	254	TGATGTCCACCCGTGCATCAGGAGTCTCAGACCGGTTTAGTGGCAGTGGG										
Mus musculus	RefSeq	ILMN_257638	ILMN_257638	TRIM25	NM_009546.1	NM_009546.1		217069	46849790	NM_009546.1	Trim25	NP_033572.1	ILMN_2927093	005390438	S	5205	CCAGCTTGGTGATTGATTACAGGGTTGAGGCCAGCCAAGACTTCTGTGAC	11	+	88881356-88881405	11qC	Mus musculus tripartite motif protein 25 (Trim25), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EFP; Zfp147; AA960166; AL022677	EFP; Zfp147; AA960166; AL022677
Mus musculus	Riken	ILMN_202987	ILMN_202987	6330500I05RIK	ri|6330500I05|PX00042G08|AK031929|3417					AK031929	6330500I05Rik		ILMN_1253129	006940630	S	3130	AGAGTGACTGTTCTTACTCAGTGGTGGTAGGTTAGGTGGAGAGCAGATGC										
Mus musculus	RefSeq	ILMN_221466	ILMN_237519	SAMD4	NM_001037221.1	NM_001037221.1		74480	82617645	NM_001037221.1	Samd4	NP_001032298.1	ILMN_2735995	000240564	S	3360	ACATAAGAATTTTAAAGGGTACATAATGTGTAGAGTGTGGATAGAACTTC	14	+	47721734-47721783	14qC1	Mus musculus sterile alpha motif domain containing 4 (Samd4), transcript variant 1, mRNA.	Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 45727] [evidence ISO]	Antagonizes ribosome-mediated translation of mRNA into a polypeptide [goid 30371] [evidence ISO]	1700111L17Rik; Smaug; 4933436G17Rik; 1700024G08Rik	1700111L17Rik; Smaug; 4933436G17Rik; 1700024G08Rik
Mus musculus	RefSeq	ILMN_237519	ILMN_237519	SAMD4	NM_001037221.1	NM_001037221.1		74480	82617645	NM_001037221.1	Samd4	NP_001032298.1	ILMN_3052081	006620601	I	1381	GTGTCCCTTACCCCACCCATGAATGTGCCAAACCAGCCTCTAGGACATGG	14	+	47672566-47672615	14qC1	Mus musculus sterile alpha motif domain containing 4 (Samd4), transcript variant 1, mRNA.	Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 45727] [evidence ISO]	Antagonizes ribosome-mediated translation of mRNA into a polypeptide [goid 30371] [evidence ISO]	1700111L17Rik; Smaug; 4933436G17Rik; 1700024G08Rik	1700111L17Rik; Smaug; 4933436G17Rik; 1700024G08Rik
Mus musculus	RefSeq	ILMN_237519	ILMN_237519	SAMD4	NM_001037221.1	NM_001037221.1		74480	82617645	NM_001037221.1	Samd4	NP_001032298.1	ILMN_3128535	000990379	A	3237	TGACCGGATTTCCCCGAGGCCCGGCTTGAAACAACCACAAGAGAGGGCTA	14	+	47721611-47721660	14qC1	Mus musculus sterile alpha motif domain containing 4 (Samd4), transcript variant 1, mRNA.	Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 45727] [evidence ISO]	Antagonizes ribosome-mediated translation of mRNA into a polypeptide [goid 30371] [evidence ISO]	1700111L17Rik; Smaug; 4933436G17Rik; 1700024G08Rik	1700111L17Rik; Smaug; 4933436G17Rik; 1700024G08Rik
Mus musculus	Riken	ILMN_201785	ILMN_201785	2210407N10RIK	ri|2210407N10|ZX00054I10|AK008848|501					AK008848	2210407N10Rik		ILMN_2544572	004780008	S	90	TGGAGCGTCTTGATAAAGCAGCGCTCAATGCGCTGCAGCCTCCAGAGTTC										
Mus musculus	RefSeq	ILMN_218000	ILMN_218000	BC004004	NM_030561.2	NM_030561.2		80748	40254143	NM_030561.2	BC004004	NP_085038.2	ILMN_1252183	002640112	S	2335	CCTCTGCCCTACCTTTTCTGTACCAGGGCAAGGTGAGATATTGGTTTAGT	17	+	29439549-29439598	17qA3.3	Mus musculus cDNA sequence BC004004 (BC004004), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2400006G15Rik; MGC7550	2400006G15Rik; MGC7550
Mus musculus	MEEBO	ILMN_185968	ILMN_185968	AMBIONRNASPIKE8_EC5	AmbionRNASpike8_EC5						AmbionRNASpike8_EC5		ILMN_2431521	003170243	S	17	TCGGCAACAGCCTGGCGGCAGTGAAGAAACTGGTGTTTGAACAAGGTGCG										
Mus musculus	RefSeq	ILMN_214039	ILMN_214039	SVS2	NM_017390.2	NM_017390.2		53878	31980847	NM_017390.2	Svs2	NP_059086.2	ILMN_2822359	005690053	S	1357	CCGCATCACTTGTACTTGTTGACTGAGAACTGGTTCCTGAGAACTGTGTC	2	-	163927457-163927506	2qH3	Mus musculus seminal vesicle protein, secretion 2 (Svs2), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IDA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IDA]	Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [evidence IDA]	MGC130221; BB115391	MGC130221; BB115391
Mus musculus	RefSeq	ILMN_215267	ILMN_231908	E230008N13RIK	XM_975070.1	XM_975070.1		381522	94373265	XM_975070.1	E230008N13Rik	XP_980164.1	ILMN_2657414	000010746	S	3279	GGCAGAGAGCCTAGTAAATCCAACCTTCTTCCTGATGGTGGGGGAGTTCC					PREDICTED: Mus musculus RIKEN cDNA E230008N13 gene (E230008N13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197798	ILMN_231908	E230008N13RIK	XM_975070.1	XM_975070.1		381522	94373265	XM_975070.1	E230008N13Rik	XP_980164.1	ILMN_1228909	004260220	S	6152	ACTGACTCGGAGGACACCATCAATAACCACCAATAAGACCACCCTGGGCC					PREDICTED: Mus musculus RIKEN cDNA E230008N13 gene (E230008N13Rik), mRNA.					
Mus musculus	MEEBO	ILMN_219874	ILMN_219874	IGK-V38	scl28918.2.12_106	XM_355779.1			38084249	XM_355779.1	Igk-V38		ILMN_1238932	000830576	S	134	GGGAGGCAAAGTCACCATCACTTGCAAGGCAAGCCAAGACATTAACAAGT										
Mus musculus	MEEBO	ILMN_219874	ILMN_219874	IGK-V38	scl28918.2.12_106	XM_355779.1			38084249	XM_355779.1	Igk-V38		ILMN_1254159	005340196	S	215	AGGTCCTAGGCTGCTCATACATTACACATCTACATTACAGCCAGGCATCC										
Mus musculus	RefSeq	ILMN_189456	ILMN_226206	UNC5B	NM_029770.2	NM_029770.2		107449	85861261	NM_029770.2	Unc5b	NP_084046.2	ILMN_2523316	002030497	S	3609	CTAGGGACCGCTCTCTTATCCCGGGTCGAGTTCAGTTCAGGCAAACTGCT	10	-	60227551-60227600	10qB4	Mus musculus unc-5 homolog B (C. elegans) (Unc5b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6330415E02Rik; Unc5h2; A630020F16; D10Bwg0792e	6330415E02Rik; Unc5h2; A630020F16; D10Bwg0792e
Mus musculus	Riken	ILMN_206834	ILMN_206834	5-HTR2C, GPCR	ri|D930023E13|PX00202K22|AK086348|2375					AK086348	5-Htr2c, GPCR		ILMN_1232346	006020133	S	1916	GCAGTCCCAGGAGATCTGATGCTCTCTTTTGACCTCTGCAAAAGACAGAG										
Mus musculus	Riken	ILMN_204975	ILMN_204975	B430320O11RIK	ri|B430320O11|PX00072F24|AK046715|2795					AK046715	B430320O11Rik		ILMN_2569039	006980711	S	2685	GGAAAGACTCCTGAATGTGTCCTCTGACCAACGTACTCGGCATACGCATG										
Mus musculus	RefSeq	ILMN_214636	ILMN_231392	4931440B09RIK	NM_027644.1	NM_027644.1		71003	58037228	NM_027644.1	4931440B09Rik	NP_081920.1	ILMN_2650180	003990050	S	902	CTCAATGGTGCAGTCAGGCGTGATCTGGCCCTGCCACTGCTGTCTATCAC	17	-	23973912-23973961	17qA3.3	Mus musculus RIKEN cDNA 4931440B09 gene (4931440B09Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Tessp-1; Tessp1	Tessp-1; Tessp1
Mus musculus	RefSeq	ILMN_247278	ILMN_247278	OLFR1381	NM_146469.1	NM_146469.1		258461	49170045	NM_146469.1	Olfr1381	NP_666680.1	ILMN_2785712	006060504	S	868	ACGCTGAGGAACAAGGATGTGAAAGGAGCCCTGTGGAAGGTGCTAGGGAG	11	+	49366118-49366167	11qB1.2	Mus musculus olfactory receptor 1381 (Olfr1381), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR256-26; RP23-58E13.6	MOR256-26; RP23-58E13.6
Mus musculus	RefSeq	ILMN_186737	ILMN_186737	ZFP524	NM_025324.2	NM_025324.2		66056	142352944	NM_025324.2	Zfp524	NP_079600.1	ILMN_2438078	000160670	S	686	AGGGTGCGCTTCACCGAGGCCAATACTCTCCGGCGCCATTACAAACGCAA	7	+	4969671-4969720	7qA1	Mus musculus zinc finger protein 524 (Zfp524), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2300009P13Rik; 0610012F07Rik	2300009P13Rik; 0610012F07Rik
Mus musculus	RefSeq	ILMN_213571	ILMN_213571	HNRPK	NM_025279.1	NM_025279.1		15387	13384619	NM_025279.1	Hnrpk	NP_079555.1	ILMN_2784821	006200673	S	1666	TCACCAGATGTAATGTTTTAGTTCCTTACAAACAGGGTTGGGGGGAGGGC	13	-	58401836-58401885	13qB1	Mus musculus heterogeneous nuclear ribonucleoprotein K (Hnrpk), mRNA.				hnRNPK; MGC102032; NOVA	hnRNPK; MGC102032; NOVA
Mus musculus	RefSeq	ILMN_212132	ILMN_212132	POU6F2	NM_175006.1	NM_175006.1		218030	27923922	NM_175006.1	Pou6f2	NP_778171.1	ILMN_1225661	006380537	S	2038	CCGAGATTGCTGAGAAGCTAAACTACGACCGGGAAGTAGTTAGAGTTTGG	13	-	18216819-18216868	13qA2	Mus musculus POU domain, class 6, transcription factor 2 (Pou6f2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RPF-1; D130006K24Rik	RPF-1; D130006K24Rik
Mus musculus	Riken	ILMN_203947	ILMN_203947	A430080N03RIK	ri|A430080N03|PX00138C14|AK040257|1472					AK040257	A430080N03Rik		ILMN_1223989	001470047	S	1313	TTTGGAACACTTCCTGTTCTTCCAGATGGCCCAAGTTCAGTCCCCAGCGC										
Mus musculus	Riken	ILMN_203997	ILMN_203997	4921503C21RIK	ri|A630037P21|PX00145L01|AK041787|1115					AK041787	4921503C21Rik		ILMN_1247805	003420427	S	952	TCCTTTAATATCTGCCTTGTGGCAAGGGCACTGCCTACTTTCTACCCTGC										
Mus musculus	RefSeq	ILMN_218488	ILMN_309949	LOC100041932	XM_001477842.1	XM_001477842.1		100041932	149253162	XM_001477842.1	LOC100041932	XP_001477892.1	ILMN_1218923	001260224	S	3478	GAACTGATCGCACTCACCCAAGCCCTGAAAATGGCAGAAGGTAAGAAGCT	4	+	132655347-132655396	4qD2.3	PREDICTED: Mus musculus hypothetical protein LOC100041932 (LOC100041932), mRNA.					
Mus musculus	MEEBO	ILMN_216127	ILMN_216127	KCTD16	scl0383348.1_25	XM_356998.1			38083671	XM_356998.1	Kctd16		ILMN_2667647	001980041	S	283	CAGGCTCCAGGGAGTCGAACATAAGCAGCAAAAAGAAAGCTGCGAAGGAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198009	ILMN_244370	ADAMTS3	NM_001081401.1	NM_001081401.1		330119	124487140	NM_001081401.1	Adamts3	NP_001074870.1	ILMN_1259142	001940066	S	3827	GTAGCTTCTCTTCCATGGCAAACCCCAATGCGGATGCTGCCTTCAGAGCC	5	-	90106640-90106689	5qE1	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3 (Adamts3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IGI]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IGI]	1100001H14Rik; 6330442E02Rik	1100001H14Rik; 6330442E02Rik
Mus musculus	RefSeq	ILMN_223438	ILMN_223438	LCE1L	NM_028628.2	NM_028628.2		73730	142379551	NM_028628.2	Lce1l	NP_082904.1	ILMN_1215878	003120184	S	498	GACAAGCAATAAAGAAAGAAACCATGTTCACAGGACCTGTTCCTGCCTGC	3	-	92653993-92654042	3qF1	Mus musculus late cornified envelope 1L (Lce1l), mRNA.				AI415426; 1110008K04Rik	AI415426; 1110008K04Rik
Mus musculus	RefSeq	ILMN_209929	ILMN_209929	SRI	NM_025618.2	NM_025618.2		109552	124430542	NM_025618.2	Sri	NP_079894.2	ILMN_2600537	007650451	S	523	GCGATACAGCACCAGCGGGAAGATCACGTTTGATGACTACATTGCCTGCT	5	+	8063677-8063726	5qA1	Mus musculus sorcin (Sri), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Sor; 2210417O06Rik; 2900070H08Rik	Sor; 2210417O06Rik; 2900070H08Rik
Mus musculus	RefSeq	ILMN_209929	ILMN_209929	SRI	NM_025618.2	NM_025618.2		109552	124430542	NM_025618.2	Sri	NP_079894.2	ILMN_2704048	001110195	S	75	GCAGGCACACAGGCCTCTAAGAATCACCACTTCCACCTGAAAAGCCTCAC	5	+	8046154-8046203	5qA1	Mus musculus sorcin (Sri), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Sor; 2210417O06Rik; 2900070H08Rik	Sor; 2210417O06Rik; 2900070H08Rik
Mus musculus	RefSeq	ILMN_209999	ILMN_209999	CYP7B1	NM_007825.3	NM_007825.3		13123	142353883	NM_007825.3	Cyp7b1	NP_031851.2	ILMN_2601215	000360187	S	1570	CACAGTCGGATGTTTTTAGGTATTCAGCACCCCGATTCTGCCGTCTCCTT	3	-	17972487-17972536	3qA1	Mus musculus cytochrome P450, family 7, subfamily b, polypeptide 1 (Cyp7b1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence TAS]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways resulting in the formation of bile acids, any of a group of steroid carboxylic acids occurring in bile [goid 6699] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reactions: cholest-5-ene-3beta,25-diol + NADPH + H+ + O2 = cholest-5-ene-3beta,7alpha,25-triol + NADP+ + H2O and cholest-5-ene-3beta,27-diol + NADPH + H+ + O2 = cholest-5-ene-3beta,7alpha,27-triol + NADP+ + H2O [goid 33783] [evidence IEA]; Catalysis of the reaction: an oxysterol + NADPH + O2 = 7-alpha-hydroxylated oxysterol + NADP+ + H2O [goid 8396] [evidence IDA]	hct-1; AW261589; D3Ertd552e	hct-1; AW261589; D3Ertd552e
Mus musculus	Riken	ILMN_203268	ILMN_203268	IRAK	ri|9330209D03|PX00107N03|AK020397|1161					AK020397	IRAK		ILMN_1218062	006130377	S	901	AAGTGTAGATTTTCCCAGCGTGGCCTGGGGAGAGAACACGGGGCCTGGTT										
Mus musculus	Riken	ILMN_203677	ILMN_203677	9530057A13RIK	ri|9530057A13|PX00113C17|AK035500|2358					AK035500	9530057A13Rik		ILMN_2559137	004260240	S	729	GGAAGCCAAGGTGAAAGATCTCCTCACACTGGCGAAAACCAAGGATGTGG										
Mus musculus	MEEBO	ILMN_196197	ILMN_196197	C130078N17RIK	scl19989.1_159						C130078N17Rik		ILMN_2522495	005260020	S	16	GACACCCAGCCCTCCGCAATAATTCACCAGACCAGAAGCCACTGATGTAC										
Mus musculus	RefSeq	ILMN_258519	ILMN_258519	GPR146	NM_001038703.1	NM_001038703.1		80290	84662746	NM_001038703.1	Gpr146	NP_001033792.1	ILMN_3077243	000990561	I	1	TGGACTCAAGGCAAACAAGTGAGGCAGGAGTTGTGTGTGGTGCTCACGAG	5	+	139865856-139865905	5qG2	Mus musculus G protein-coupled receptor 146 (Gpr146), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC7035; PGR8; BC003323	MGC7035; PGR8; BC003323
Mus musculus	RefSeq	ILMN_258519	ILMN_258519	GPR146	NM_001038703.1	NM_001038703.1		80290	84662746	NM_001038703.1	Gpr146	NP_001033792.1	ILMN_3156208	001980370	A	3836	CTCAATGCCACATGACACGACATAGGAAACCAGGCCCCTTGCTCACTGGG	5	+	139872057-139872106	5qG2	Mus musculus G protein-coupled receptor 146 (Gpr146), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC7035; PGR8; BC003323	MGC7035; PGR8; BC003323
Mus musculus	MEEBO	ILMN_184889	ILMN_184889	TLE2	scl38645.19.1_1				9789970	NM_019725	Tle2		ILMN_2669225	001510025	S	2280	GGACAACCTGCTCAATGCCTGGAGGACACCCTATGGGGCCAGCATTTTTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]			
Mus musculus	RefSeq	ILMN_209922	ILMN_211691	NASP	NM_016777.3	NM_016777.3		50927	125490377	NM_016777.3	Nasp	NP_058057.3	ILMN_1251930	002480022	S	2848	CTATCTGCTGTTCATCTGGTTTCCATTTAAGGCCATAATCCTATCCTGGG	4	-	116273846-116273895	4qD1	Mus musculus nuclear autoantigenic sperm protein (histone-binding) (Nasp), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits [goid 43486] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IDA]; Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [evidence IDA]	5033430J04Rik; AI317140; AI131596; D4Ertd767e; Epcs32	5033430J04Rik; AI317140; AI131596; D4Ertd767e; Epcs32
Mus musculus	RefSeq	ILMN_211691	ILMN_211691	NASP	NM_016777.3	NM_016777.3		50927	125490377	NM_016777.3	Nasp	NP_058057.3	ILMN_1238894	002470520	S	321	GGTAAGAAGTATGGAGAAACGGCTAATGAGTGTGGAGAAGCCTTCTTTTT	4	-	116286964-116287013	4qD1	Mus musculus nuclear autoantigenic sperm protein (histone-binding) (Nasp), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits [goid 43486] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IDA]; Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [evidence IDA]	5033430J04Rik; AI317140; AI131596; D4Ertd767e; Epcs32	5033430J04Rik; AI317140; AI131596; D4Ertd767e; Epcs32
Mus musculus	RefSeq	ILMN_211691	ILMN_211691	NASP	NM_016777.3	NM_016777.3		50927	125490377	NM_016777.3	Nasp	NP_058057.3	ILMN_1237993	003390735	S	261	CTGGTGATGGGTGACATTCCAGCAGCTGTTAATGCATTCCAGGAAGCAGC	4	-	116291483-116291532	4qD1	Mus musculus nuclear autoantigenic sperm protein (histone-binding) (Nasp), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits [goid 43486] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IDA]; Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [evidence IDA]	5033430J04Rik; AI317140; AI131596; D4Ertd767e; Epcs32	5033430J04Rik; AI317140; AI131596; D4Ertd767e; Epcs32
Mus musculus	Riken	ILMN_207328	ILMN_207328	5330420J21RIK	ri|5330420J21|PX00643O11|AK077327|1956					AK077327	5330420J21Rik		ILMN_2586777	000050184	S	1529	CGGTGGTCTACATTTACACTGGTTTTCCAGGGATGGCCAGTCTGCAGCCT										
Mus musculus	MEEBO	ILMN_209090	ILMN_209090	BTBD3	scl0003393.1_155	NM_145534.1			21704051	NM_145534.1	Btbd3		ILMN_2599955	007150392	S	2231	GGGAGATCGTGTGCTTTTCCAAGTGCCCACCAACCTCCTACTTCTGTACC								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_246208	ILMN_246208	PSMD1	NM_027357.1	NM_027357.1		70247	74315974	NM_027357.1	Psmd1	NP_081633.1	ILMN_2915861	007650209	S	2954	GTGGCAGCACACGGCCCAAAGATTGAAGAGGAAGAGCAAGAGCCAGAGCC	1	+	87968201-87968250	1qC5	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 (Psmd1), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Modulates the activity of an enzyme [goid 30234] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	S1; 2410026J11Rik; P112	S1; 2410026J11Rik; P112
Mus musculus	RefSeq	ILMN_254780	ILMN_254780	RAB28	NM_027295.1	NM_027295.1		100972	58037190	NM_027295.1	Rab28	NP_081571.1	ILMN_2990864	004760373	S	1220	CAGAGCGCTGATGGTGAAAGCCTCTCAAGAAGGTGTTCCTTTGCTGGCTA	5	-	41913590-41913639	5qB3	Mus musculus RAB28, member RAS oncogene family (Rab28), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AW496496; 2700023P08Rik; MGC8039	AW496496; 2700023P08Rik; MGC8039
Mus musculus	RefSeq	ILMN_218266	ILMN_218266	SLC25A17	NM_011399.3	NM_011399.3		20524	146134482	NM_011399.3	Slc25a17	NP_035529.1	ILMN_1222474	002630500	S	1366	GGTAAAGAGTTCCTCTGAGAATAACATCATGACTGTGCCATGGGCATGAC				15qE1	Mus musculus solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 (Slc25a17), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	47kDa; PMP34; 34kDa; Pmp47	47kDa; PMP34; 34kDa; Pmp47
Mus musculus	Riken	ILMN_204488	ILMN_204488	B130016L16RIK	ri|B130016L16|PX00157P13|AK044970|2713					AK044970	B130016L16Rik		ILMN_1220375	006960500	S	2533	ATTAGACCCTCACACAATCAGTTTGACTATGGCTGCGGCCTTGTAGGACC										
Mus musculus	RefSeq	ILMN_208713	ILMN_208713	PGAM2	NM_018870.2	NM_018870.2		56012	118130705	NM_018870.2	Pgam2	NP_061358.1	ILMN_2588815	004250750	S	779	CTGTTGCTGCCCAGGGAAAGGCGAAGTGAGGGTGGACGGGGCAATAAAGT	11	-	5701654-5701675:5701676-5701703	11qA1	Mus musculus phosphoglycerate mutase 2 (Pgam2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IEA]; Catalysis of the reaction: 2,3-diphosphoglycerate + H2O = 3-phosphoglycerate + phosphate [goid 4083] [evidence IEA]; Catalysis of the reaction: 2-phospho-D-glycerate = 3-phospho-D-glycerate [goid 4619] [evidence IDA]; Catalysis of the reaction: 3-phospho-D-glyceroyl phosphate = 2,3-bisphospho-D-glycerate [goid 4082] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223504	ILMN_223504	MAFG	NM_010756.3	NM_010756.3		17134	34328461	NM_010756.3	Mafg	NP_034886.1	ILMN_2764883	004760288	S	1555	CCTGGGGACAGCGCTGTGGCTGTTGGAGTTTAGTTTTTATACACAGAGTT	11	-	120489696-120489745	11qE2	Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) (Mafg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Any process that modulates the frequency, rate or extent of epidermal cell differentiation [goid 45604] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	C630022N07Rik; AA545192	C630022N07Rik; AA545192
Mus musculus	RefSeq	ILMN_209441	ILMN_209441	CORO6	NM_139128.1	NM_139128.1		216961	41281696	NM_139128.1	Coro6	NP_624354.1	ILMN_2710086	001400114	S	1342	CGAGTGCAGGCCCAAGAGGAGCGCATCACTGCGTTGGAAAACATGCTCTG	11	+	77282929-77282978	11qB5	Mus musculus coronin 6 (Coro6), transcript variant A, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_209441	ILMN_209441	CORO6	NM_139128.1	NM_139128.1		216961	41281696	NM_139128.1	Coro6	NP_624354.1	ILMN_2595792	004540047	S	679	TTCACCGCAGACGGGAAGCTGCTCAGCACCGGCTTCAGCAGGATGAGTGA	11	+	77280771-77280820	11qB5	Mus musculus coronin 6 (Coro6), transcript variant A, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_211508	ILMN_211508	CCNH	NM_023243.4	NM_023243.4		66671	146134936	NM_023243.4	Ccnh	NP_075732.1	ILMN_2616531	004150040	S	1007	TGACGACCTGGTAGATTCTCTCTAACCATAATAAATGACCGCAGCAGTAC				13qC3	Mus musculus cyclin H (Ccnh), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence ISS]	AI661354; 6330408H09Rik; AW538719; AV102684	AI661354; 6330408H09Rik; AW538719; AV102684
Mus musculus	RefSeq	ILMN_197323	ILMN_229700	GM561	NM_001033297.2	NM_001033297.2		228715	141802860	NM_001033297.2	Gm561	NP_001028469.1	ILMN_1259668	003440504	S	285	CCAGCCACTCAAAGGTTCCTGACCTATCTGAAGTCATGGACTGGTGGGCC	2	+	144420927-144420976	2qG1	Mus musculus gene model 561, (NCBI) (Gm561), mRNA.					
Mus musculus	MEEBO	ILMN_211134	ILMN_211134	OLFR1283	scl0228443.1_111				46402218	NM_207236	Olfr1283		ILMN_2612886	004260474	S	430	TCGTTGTGATCTCGTGGACCATTGGCTTTATACATGCCATGAGTCAACTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211472	ILMN_211472	ICK	NM_019987.1	NM_019987.1		56542	9910287	NM_019987.1	Ick	NP_064371.1	ILMN_1248854	006220731	S	2164	TGTACCCGCACAACCACGAGGCGGTGTAAAACAACCCACACTTACAGCTG	9	+	78015612-78015661	9qE1	Mus musculus intestinal cell kinase (Ick), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	AI848300; 2210420N10Rik	AI848300; 2210420N10Rik
Mus musculus	RefSeq	ILMN_211472	ILMN_211472	ICK	NM_019987.1	NM_019987.1		56542	9910287	NM_019987.1	Ick	NP_064371.1	ILMN_2777351	000650468	S	2081	ACGGCAGGATAGACTGGTCTTCCAAGTACCCATCCCGGCGGTGACTGTCC	9	+	78015529-78015561:78015562-78015578	9qE1	Mus musculus intestinal cell kinase (Ick), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	AI848300; 2210420N10Rik	AI848300; 2210420N10Rik
Mus musculus	RefSeq	ILMN_222775	ILMN_222775	DPEP1	NM_007876.1	NM_007876.1		13479	6681216	NM_007876.1	Dpep1	NP_031902.1	ILMN_2754551	002350747	S	1255	GGACAGAGACCGAGGTCAGAGGTTTGCTAGCTGACAACCTGATTCGGGTC	8	+	125724613-125724662	8qE1	Mus musculus dipeptidase 1 (renal) (Dpep1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	MBD; AI327012	MBD; AI327012
Mus musculus	RefSeq	ILMN_217033	ILMN_217033	CTF1	NM_007795.1	NM_007795.1		13019	6681074	NM_007795.1	Ctf1	NP_031821.1	ILMN_2678336	000360292	S	1185	TTTGTAGGCAAATCCCTCCCCCTTTGAGGTCCTTCCCTTTCATACCGCCC	7	+	134861539-134861588	7qF3	Mus musculus cardiotrophin 1 (Ctf1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IGI]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	CT-1	CT-1
Mus musculus	MEEBO	ILMN_186058	ILMN_186058	IGHV1S35_M12376_IG_HEAVY_VARIABLE_1S35_13	IGHV1S35_M12376_Ig_heavy_variable_1S35_13						IGHV1S35_M12376_Ig_heavy_variable_1S35_13		ILMN_2432262	001470286	S	20	CTCTTTTTGGCAGCAACAGCTACAGGTGTCCACTCCCAGGTCCAACTGCA										
Mus musculus	MEEBO	ILMN_195647	ILMN_195647	HABP4	scl056541.13_2				9910299	NM_019986	Habp4		ILMN_2777744	006620064	S	2201	TAGGGAAGATTCATTGTATGTGGGAGGGACGAGCCAAGGTGTTGGGCAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence ISA]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence ISA]		
Mus musculus	RefSeq	ILMN_219278	ILMN_219278	ARMC5	NM_146205.2	NM_146205.2		233912	48928021	NM_146205.2	Armc5	NP_666317.2	ILMN_1224716	000630377	S	3722	CTCAAAAGCCAATACCAGAGTCTGTGCAGGAGTCCAAGGGACAGCTCAGG	7	+	135388502-135388551	7qF3	Mus musculus armadillo repeat containing 5 (Armc5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC032200; MGC102240; MGC36606; AW049683	BC032200; MGC102240; MGC36606; AW049683
Mus musculus	RefSeq	ILMN_194508	ILMN_247754	HSPA4L	NM_011020.3	NM_011020.3		18415	40254360	NM_011020.3	Hspa4l	NP_035150.3	ILMN_1230843	004810730	S	3368	GATTTTTGTTAATAATACCTTAATCCAGGGTAGGGAGACGTTGCACAATG	3	+	40594097-40594146	3qB	Mus musculus heat shock protein 4 like (Hspa4l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC117843; Osp94; AI461691; 94kDa; APG-1	MGC117843; Osp94; AI461691; 94kDa; APG-1
Mus musculus	MEEBO	ILMN_192794	ILMN_192794	TM7SF3	scl28197.12_81	XM_132970.3			38085460	XM_132970.3	Tm7sf3		ILMN_2521376	004490519	S	6	CTCTATTTGGACTATAATTTTTTTGAGACAACTATCAAGTTCGCACCAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_218954	ILMN_218954	PHC3	NM_153421.1	NM_153421.1		241915	24025667	NM_153421.1	Phc3	NP_700470.1	ILMN_2702360	006180367	S	3390	CCTACCCAGTTAGTTTTCTAAATGTTGTCATAGAGATATAGGATAATTTA	3	-	30805829-30805878	3qA3	Mus musculus polyhomeotic-like 3 (Drosophila) (Phc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HPH3; Edr3; E030046K01Rik	HPH3; Edr3; E030046K01Rik
Mus musculus	RefSeq	ILMN_191894	ILMN_244782	CDKN3	XM_904821.2	XM_904821.2		72391	94397386	XM_904821.2	Cdkn3	XP_909914.1	ILMN_2483145	004890070	S	736	CGTGTCTCTTAACTTGTCATCTCAGCCTTTTCAGTAGCAAGGAAGTCACT				14qC1	PREDICTED: Mus musculus cyclin-dependent kinase inhibitor 3, transcript variant 4 (Cdkn3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence ISO]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISO]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence ISO]		
Mus musculus	RefSeq	ILMN_199427	ILMN_199427	OLFR382	NM_146443.1	NM_146443.1		258435	33239297	NM_146443.1	Olfr382	NP_666654.1	ILMN_2611518	003190390	S	659	AAATTGTCTACTCCATTCTAAAGATTTCATCTGCTCATGTTTTACACAAG	11	-	73329991-73330040	11qB4	Mus musculus olfactory receptor 382 (Olfr382), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR135-14; RP23-206D6.1	MOR135-14; RP23-206D6.1
Mus musculus	RefSeq	ILMN_245801	ILMN_245801	4930408O21RIK	NM_001040136.1	NM_001040136.1		67983	92373387	NM_001040136.1	4930408O21Rik	NP_001035226.1	ILMN_3015518	000620376	I	439	CACCATAGGGACAGTGCTACAAATTAAGGCTTACCGAGGCTTTCTTGAAA				7qF2	Mus musculus RIKEN cDNA 4930408O21 gene (4930408O21Rik), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_245801	ILMN_245801	4930408O21RIK	NM_001040136.1	NM_001040136.1		67983	92373387	NM_001040136.1	4930408O21Rik	NP_001035226.1	ILMN_3086919	006550673	A	1273	CCCCTGCCCCCACCCTCTCAGTGATACTTTTACTGGGAATGTCAGGACTG				7qF2	Mus musculus RIKEN cDNA 4930408O21 gene (4930408O21Rik), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210226	ILMN_210226	FUNDC2	NM_026126.2	NM_026126.2		67391	31541956	NM_026126.2	Fundc2	NP_080402.2	ILMN_2715629	006220343	S	1853	TGGAAACATAAAGAGAGTACAGTGATTTCCCCAAGTATCCATTGCTTGCC	X	+	71648493-71648542	XqA7.3	Mus musculus FUN14 domain containing 2 (Fundc2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DC44; HCBP6; 4833415N24Rik	DC44; HCBP6; 4833415N24Rik
Mus musculus	RefSeq	ILMN_194658	ILMN_225097	3110009E22RIK	XM_908512.2	XM_908512.2		73092	94388105	XM_908512.2	3110009E22Rik	XP_913605.1	ILMN_1230683	007610333	S	27	TGGTTTCAAACTTTCGGTTTGCGGTCGCAACATCTCACGTCTCACGGGAG					PREDICTED: Mus musculus RIKEN cDNA 3110009E22 gene (3110009E22Rik), mRNA.					
Mus musculus	MEEBO	ILMN_190573	ILMN_190573	SCL0018355.1_38	scl0018355.1_38	AF102532.1			3983391	AF102532.1	scl0018355.1_38		ILMN_1218231	000150470	S	20	GATCCACCATTTTACTTGTCATGTTCCACCTCTATTGAAGTTGGCATGCG										
Mus musculus	RefSeq	ILMN_209883	ILMN_209883	OLFR586	NM_147111.1	NM_147111.1		259115	22128738	NM_147111.1	Olfr586	NP_667322.1	ILMN_2600115	007650097	S	822	CCCCATATCTAAGATTCTCATGGCTGACATTTTCTTGCTTGTGCCTCCTG	7	-	110270425-110270474	7qE3	Mus musculus olfactory receptor 586 (Olfr586), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR8-7; MGC123788; MGC123801; MOR8-2; MGC123800	MOR8-7; MGC123788; MGC123801; MOR8-2; MGC123800
Mus musculus	Riken	ILMN_206450	ILMN_206450	C230072O15RIK	ri|C230072O15|PX00176O15|AK082633|2753					AK082633	C230072O15Rik		ILMN_1237386	002900040	S	2483	AGCATGGGCACTGTAAGGAAATAAGGCCCAGCCTCTGGTTGAGGTGTGAG										
Mus musculus	MEEBO	ILMN_217786	ILMN_217786	BAPX1	scl26649.3.1_7	NM_007524.1			6680765	NM_007524.1	Bapx1		ILMN_2687594	006480097	S	1480	ACACCGGGCCACCGATCCTCAAGCCTCGGGACGCTATTTATTATTCACAA										
Mus musculus	MEEBO	ILMN_217786	ILMN_217786	BAPX1	scl26649.3.1_7	NM_007524.1			6680765	NM_007524.1	Bapx1		ILMN_2687592	003170709	S	1479	CACACCGGGCCACCGATCCTCAAGCCTCGGGACGCTATTTATTATTCACA										
Mus musculus	RefSeq	ILMN_210568	ILMN_210568	KLB	NM_031180.2	NM_031180.2		83379	118130737	NM_031180.2	Klb	NP_112457.1	ILMN_2606921	004490253	S	3168	CGGCTCCATGTACTGGTAACTTACGATGTGAGAGACAGCTGTAACCAAGG	5	+	65774971-65775020	5qC3.1	Mus musculus klotho beta (Klb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	AV071179	AV071179
Mus musculus	RefSeq	ILMN_211289	ILMN_211289	BMPR2	NM_007561.3	NM_007561.3		12168	145966831	NM_007561.3	Bmpr2	NP_031587.1	ILMN_2614324	007320327	S	2764	TACACAAGGTGTTACAAGCACAGCTGCAGATCCTGGGCCATCAAAGCCCA				1qC1.3	Mus musculus bone morphogenic protein receptor, type II (serine/threonine kinase) (Bmpr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The process that modulates the force with which blood travels through the lungs. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 14916] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence ISO]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence ISO]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vasoconstriction [goid 45906] [evidence IMP]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2610024H22Rik; AL117858; AW546137; BMPR-II; BMP-2; BB189135	2610024H22Rik; AL117858; AW546137; BMPR-II; BMP-2; BB189135
Mus musculus	RefSeq	ILMN_205222	ILMN_223528	BCAM	NM_020486.2	NM_020486.2		57278	119226187	NM_020486.2	Bcam	NP_065232.1	ILMN_1223746	004760008	S	29	CCCGGGCTCAGTCACTGCCGCCACTGCAGGGAACATGGAACCCCCTGACG	7	-	20355803-20355819:20355820-20355852	7qA3	Mus musculus basal cell adhesion molecule (Bcam), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Combining with a laminin, a glycoprotein that constitutes the majority of proteins in the basement membrane, to initiate a change in cell activity [goid 5055] [evidence IDA]	1200005K12Rik; Lu; B-CAM; Gplu	1200005K12Rik; Lu; B-CAM; Gplu
Mus musculus	RefSeq	ILMN_223528	ILMN_223528	BCAM	NM_020486.2	NM_020486.2		57278	119226187	NM_020486.2	Bcam	NP_065232.1	ILMN_2765224	002850059	S	2020	ACGCCTCTGCCTCCTTCCTTCTCCAGCCTCGGCCCTCCCTTCCTTCCTCT	7	-	20341824-20341873	7qA3	Mus musculus basal cell adhesion molecule (Bcam), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Combining with a laminin, a glycoprotein that constitutes the majority of proteins in the basement membrane, to initiate a change in cell activity [goid 5055] [evidence IDA]	1200005K12Rik; Lu; B-CAM; Gplu	1200005K12Rik; Lu; B-CAM; Gplu
Mus musculus	MEEBO	ILMN_191988	ILMN_191988	LOC244346	scl35017.3.54_27						LOC244346		ILMN_2483982	005050010	S	20	GCGCCGCTTTGTCCGCGGGGGCCGGCTTTATTTCCCGCCTTTGCGGTGGA										
Mus musculus	RefSeq	ILMN_210993	ILMN_210993	TAS2R139	NM_181275.1	NM_181275.1		353148	31044478	NM_181275.1	Tas2r139	NP_851792.1	ILMN_1221481	002370056	S	850	GTCTACCCAGCTGGCCATTCAGTTTTACTAATTCAGAACAACCCTGGATT	6	+	42091784-42091833	6qB2.1	Mus musculus taste receptor, type 2, member 139 (Tas2r139), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence NAS]	Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence NAS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mt2r34; Tas2r39	mt2r34; Tas2r39
Mus musculus	RefSeq	ILMN_246137	ILMN_246137	NUDC-PS1	NR_001572.1	NR_001572.1		384793	37574109	NR_001572.1	Nudc-ps1		ILMN_2856861	002140092	S	389	TTTCCTGGGACCTGGGAACCTTAGGGCTGGGGCAGGCATGGATTTCCCAG					Mus musculus nuclear distribution gene C homolog (Aspergillus), pseudogene 1 (Nudc-ps1), non-coding RNA.				AL022907	AL022907
Mus musculus	RefSeq	ILMN_211129	ILMN_211129	CES6	NM_133960.4	NM_133960.4		102022	149363640	NM_133960.4	Ces6	NP_598721.1	ILMN_1259503	003460551	S	1886	GAGCAGTCAGTGTTATTTCTTATCATTCTGGGCAAACATTCATTAGAATC				8qD3	Mus musculus carboxylesterase 6 (Ces6), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]	AI266984; 9130231C15Rik	AI266984; 9130231C15Rik
Mus musculus	MEEBO	ILMN_190794	ILMN_190794	1110014C03RIK	scl42223.4_61				31980851	NM_026775	1110014C03Rik		ILMN_2763255	004290390	S	1263	GAGCTTTGAACTGTAGATAATCTCTTAAAAAAATCTCATTTTAGACCATT										
Mus musculus	RefSeq	ILMN_198863	ILMN_198863	LOC270037	XM_193374.2	XM_193374.2			38089172	XM_193374.2	LOC270037		ILMN_2533188	004200039	S	25	CGGAAACTCCGAGGCCACGTGAGCCACGGCCACGGCCGCATGGGTAAGCA										
Mus musculus	RefSeq	ILMN_255978	ILMN_255978	ENSMUSG00000043661	NM_001045541.1	NM_001045541.1		621818	113865930	NM_001045541.1	ENSMUSG00000043661	NP_001039006.1	ILMN_2875413	001500725	S	11	ACTTAGTGGGCCCAGAGGGCAGCCAGGATGTTTCCAGAGTGGAGGGAACA	X	-	100721358-100721407	XqD	Mus musculus predicted gene, ENSMUSG00000043661 (ENSMUSG00000043661), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222790	ILMN_222790	ABT1	NM_013924.1	NM_013924.1		30946	33468952	NM_013924.1	Abt1	NP_038952.1	ILMN_2754859	005570286	S	4056	TCACTTAGAATGTCAGGCTGGCTTCCCCCGACTTCCCCTCCTAAGGTGAG	13	-	23426176-23426225	13qA3.1	Mus musculus activator of basal transcription (Abt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_236006	ILMN_236006	DEFB14	NM_183026.1	NM_183026.1		244332	33942109	NM_183026.1	Defb14	NP_898847.1	ILMN_3161733	002320681	S	41	TCTTGGTGCCTGCTCCAGGGGACGCATTCCTACCAAAAACCCTCCGAAAA	8	+	19194397-19194414:19195067-19195098	8qA1.3	Mus musculus defensin beta 14 (Defb14), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	RefSeq	ILMN_256631	ILMN_256631	RGS5	NM_009063.2	NM_009063.2		19737	29336054	NM_009063.2	Rgs5	NP_033089.2	ILMN_2979824	003170053	S	1544	AGGGTAGGAAGGGTGCCTCAAGGGCAGTGCTGTGAGGCCACAAAAGGATG	1	+	171529936-171529985	1qH3	Mus musculus regulator of G-protein signaling 5 (Rgs5), mRNA.		The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	1110070A02Rik	1110070A02Rik
Mus musculus	RefSeq	ILMN_199055	ILMN_199055	LOC216223	XM_125885.2	XM_125885.2			38090663	XM_125885.2	LOC216223		ILMN_2533887	002260017	S	1237	TGGCTATGTGCTAGAGTATTGCTTTGAAGGAAGTAAGTACACCTAGATGT										
Mus musculus	RefSeq	ILMN_212047	ILMN_212047	ZFP830	NM_025884.4	NM_025884.4		66983	142360645	NM_025884.4	Zfp830	NP_080160.2	ILMN_1238403	004760164	S	2094	CAGGTTCTTTCAATGGCAGGAAGATAGGTAAGTTGCTAGTAAGGCAATGC	11	+	82579940-82579989	11qC	Mus musculus zinc finger protein 830 (Zfp830), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IMP]; An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation [goid 1832] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AV301118; 2410003C20Rik; AW048207; RP23-316C11.5; Omcg1	AV301118; 2410003C20Rik; AW048207; RP23-316C11.5; Omcg1
Mus musculus	RefSeq	ILMN_200036	ILMN_200036	LOC383159	XM_356902.1	XM_356902.1			38079961	XM_356902.1	LOC383159		ILMN_2537366	000290411	S	63	GTTTCCACAAGAGCTGTCCAGTGTGGAGTCATACGAATCTCTTAAGGGGA										
Mus musculus	RefSeq	ILMN_213408	ILMN_215120	HIST1H2BK	NM_175665.1	NM_175665.1		319184	30089703	NM_175665.1	Hist1h2bk	NP_783596.1	ILMN_2636781	000130551	S	25	CCCGCCCCGAAGAAGGGCTCCAAGAAGGCCGTCACCAAGGCCCAGAAGAA	13	+	22127780-22127829	13qA3.1	Mus musculus histone cluster 1, H2bk (Hist1h2bk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	RP23-9O16.11	RP23-9O16.11
Mus musculus	RefSeq	ILMN_215120	ILMN_215120	HIST1H2BK	NM_175665.1	NM_175665.1		319184	30089703	NM_175665.1	Hist1h2bk	NP_783596.1	ILMN_2655785	000130754	S	319	CTGGCCAAGCACGCCGTGTCGGAGGGCACCAAGGCTGTCACCAAGTATAC	13	+	22128074-22128123	13qA3.1	Mus musculus histone cluster 1, H2bk (Hist1h2bk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	RP23-9O16.11	RP23-9O16.11
Mus musculus	RefSeq	ILMN_235407	ILMN_235407	CCDC11	NM_028948.1	NM_028948.1		74453	116812880	NM_028948.1	Ccdc11	NP_083224.1	ILMN_2778751	006280224	S	1350	GATTGCCCACCAGCAGCAGGCTCGAGAAGCAGAAAAGGAAGAGGAACGCC	18	+	74519222-74519271	18qE2	Mus musculus coiled-coil domain containing 11 (Ccdc11), mRNA. XM_924500				4933415I03Rik; MGC117752	4933415I03Rik; MGC117752
Mus musculus	Riken	ILMN_205732	ILMN_205732	A230060D07RIK	ri|A230060D07|PX00128D22|AK038754|3890					AK038754	A230060D07Rik		ILMN_2574810	004070164	S	1850	CATATGTGTGTAGGAGTTGAAGCCAGAGGAGGAGGTAGGCTGTCCTGCAC										
Mus musculus	RefSeq	ILMN_210875	ILMN_313908	LOC624662	XR_033663.1	XR_033663.1		624662	149253761	XR_033663.1	LOC624662		ILMN_2673668	001980373	S	468	GCCATGATGAACGAGGCCCCGGGCCCCATCAATTTCACCATGTTCCTCAC				5qC3.1	PREDICTED: Mus musculus similar to MGC69457 protein (LOC624662), misc RNA.					
Mus musculus	RefSeq	ILMN_210889	ILMN_210889	SOX5	NM_011444.1	NM_011444.1		20678	6755607	NM_011444.1	Sox5	NP_035574.1	ILMN_2631143	004880553	S	2451	TCCGGTTCATCCTTCCCAGTGGCCAAGCACATTAACTCTCTCATACACTG	6	-	143781687-143781736	6qG3	Mus musculus SRY-box containing gene 5 (Sox5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IGI]; The process controlling the timing and/or rate at which a relatively unspecialized cell acquires features of a neuron [goid 60164] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI528773; MGC124352	AI528773; MGC124352
Mus musculus	RefSeq	ILMN_210889	ILMN_210889	SOX5	NM_011444.1	NM_011444.1		20678	6755607	NM_011444.1	Sox5	NP_035574.1	ILMN_1213910	005050082	S	2509	TTTAACTGTTAGTCTTATATAGTTGGGACATCAGCTGACAAATAGACCTC	6	-	143781629-143781678	6qG3	Mus musculus SRY-box containing gene 5 (Sox5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IGI]; The process controlling the timing and/or rate at which a relatively unspecialized cell acquires features of a neuron [goid 60164] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI528773; MGC124352	AI528773; MGC124352
Mus musculus	RefSeq	ILMN_210889	ILMN_210889	SOX5	NM_011444.1	NM_011444.1		20678	6755607	NM_011444.1	Sox5	NP_035574.1	ILMN_2610223	001340128	S	28	AGGTTTGGACCGACTTGACAGGTTCAGTTGGAGCCAGCCGATCATAGGTG	6	-	144157923-144157972	6qG3	Mus musculus SRY-box containing gene 5 (Sox5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IGI]; The process controlling the timing and/or rate at which a relatively unspecialized cell acquires features of a neuron [goid 60164] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI528773; MGC124352	AI528773; MGC124352
Mus musculus	RefSeq	ILMN_210889	ILMN_210889	SOX5	NM_011444.1	NM_011444.1		20678	6755607	NM_011444.1	Sox5	NP_035574.1	ILMN_1244213	006020273	S	1833	TCCTTCAGGCCTTTCCCGACATGCACAATTCCAACATCAGCAAGATACTG	6	-	143789694-143789743	6qG3	Mus musculus SRY-box containing gene 5 (Sox5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IGI]; The process controlling the timing and/or rate at which a relatively unspecialized cell acquires features of a neuron [goid 60164] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI528773; MGC124352	AI528773; MGC124352
Mus musculus	RefSeq	ILMN_246084	ILMN_246084	SEMA3B	NM_001042779.1	NM_001042779.1		20347	112421093	NM_001042779.1	Sema3b	NP_001036244.1	ILMN_3092046	000770392	A	3082	CAGCAGACAACAGGTAGTCCTAGACCTTGCTGGGGGCTCTTGGGTATCGC	9	-	107500619-107500668	9qF1	Mus musculus sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B (Sema3b), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		SemA; sema5; semaV; Semaa; AW208495; LUCA-1	SemA; sema5; semaV; Semaa; AW208495; LUCA-1
Mus musculus	RefSeq	ILMN_246084	ILMN_246084	SEMA3B	NM_001042779.1	NM_001042779.1		20347	112421093	NM_001042779.1	Sema3b	NP_001036244.1	ILMN_3019907	003370594	I	229	TCTGACTCTCATCTGTCGGCTCTTCGCCCTTTACTGCCTGGGGACCTTGT	9	-	107507820-107507869	9qF1	Mus musculus sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B (Sema3b), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		SemA; sema5; semaV; Semaa; AW208495; LUCA-1	SemA; sema5; semaV; Semaa; AW208495; LUCA-1
Mus musculus	RefSeq	ILMN_217652	ILMN_217652	SERF2	NM_011354.2	NM_011354.2		378702	84875510	NM_011354.2	Serf2	NP_035484.1	ILMN_1223346	001470470	S	591	GTTACCCCTTCCCAGTGTTTTTTATTCCTGTGGGGCACACCCCAAAGTAT	2	+	121276724-121276773	2qE5	Mus musculus small EDRK-rich factor 2 (Serf2), mRNA.				Msmac1l; C80083; m4F5rel	Msmac1l; C80083; m4F5rel
Mus musculus	Riken	ILMN_207011	ILMN_207011	BTG3	ri|7330435N05|PX00650L07|AK078652|3012					AK078652	Btg3		ILMN_1249141	005420743	S	2651	TCTCTGTCCTTGAGAGGCCGCCATCGGTGAGTACGTGAGTACGTGCCAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200691	ILMN_200691	LOC383456	XM_358732.1	XM_358732.1			38085237	XM_358732.1	LOC383456		ILMN_2539664	006060762	S	616	AGAGAGTCAATCCTCACCCACAGCGAGTGCATCCTCACCCACAGCGAGTG										
Mus musculus	RefSeq	ILMN_197864	ILMN_197864	LOC242703	XM_144101.1	XM_144101.1			20848832	XM_144101.1	LOC242703		ILMN_1223699	006330180	S	54	TTCGTCTCTTCCTCGCTTGTCGGAGCGAGATGGCTGCAGCTGGAAAGGAC										
Mus musculus	RefSeq	ILMN_211453	ILMN_243979	1110049B09RIK	NM_001024478.1	NM_001024478.1		68764	67846106	NM_001024478.1	1110049B09Rik	NP_001019649.1	ILMN_2616045	003400048	S	2210	CTCCACATCTGCATGGTATGTGCCGTTCATCGTCACTCTGGGATCCATAC	12	-	33727317-33727366	12qA3	Mus musculus RIKEN cDNA 1110049B09 gene (1110049B09Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BB172694	BB172694
Mus musculus	RefSeq	ILMN_243979	ILMN_243979	1110049B09RIK	NM_001024478.1	NM_001024478.1		68764	67846106	NM_001024478.1	1110049B09Rik	NP_001019649.1	ILMN_3159695	000450431	A	2820	GAGCGGTCCCGTTGCCCTGCTTCCTTGATGACTCTTGGGATTGTCAGACC	12	-	33718744-33718793	12qA3	Mus musculus RIKEN cDNA 1110049B09 gene (1110049B09Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BB172694	BB172694
Mus musculus	RefSeq	ILMN_243979	ILMN_243979	1110049B09RIK	NM_001024478.1	NM_001024478.1		68764	67846106	NM_001024478.1	1110049B09Rik	NP_001019649.1	ILMN_3080273	007320193	I	462	GTTCAGGTGACAGATGTGAACGAGCCTCCTCAGTTCCAAGGCATCCTGGC	12	-	33767077-33767126	12qA3	Mus musculus RIKEN cDNA 1110049B09 gene (1110049B09Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BB172694	BB172694
Mus musculus	RefSeq	ILMN_197642	ILMN_197642	LOC381471	XM_358590.1	XM_358590.1			38077065	XM_358590.1	LOC381471		ILMN_2528846	001300079	S	413	ATAAAGAAATTTCGTATCTCCACCATGGGCTGCAACAAGGAGTACCAACC										
Mus musculus	RefSeq	ILMN_217497	ILMN_217497	SYT6	NM_018800.3	NM_018800.3		54524	111038121	NM_018800.3	Syt6	NP_061270.2	ILMN_1237040	004780619	S	1227	GCAGGCTCACCCTCACAGTGATCAAGTGTCGAAATCTCAAAGCAATGGAC	3	+	103424752-103424801	3qF2.2	Mus musculus synaptotagmin VI (Syt6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IPI]	3110037A08Rik; AW048930	3110037A08Rik; AW048930
Mus musculus	RefSeq	ILMN_221427	ILMN_221427	DCTN3	NM_016890.3	NM_016890.3		53598	142380109	NM_016890.3	Dctn3	NP_058586.2	ILMN_1227925	000540338	S	45	ATGTGCAGCGGCTACAGTCTCGAGTGGAGGAGCTGGAGCGCTGGGTGTAC	4	-	41670096-41670145	4qA5	Mus musculus dynactin 3 (Dctn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p24	p24
Mus musculus	RefSeq	ILMN_200931	ILMN_200931	LOC381907	XM_355925.1	XM_355925.1			38087132	XM_355925.1	LOC381907		ILMN_1241873	001940647	S	2247	CTGGCGTTGATGAGCTGTGTTCTCACGAGTAAGGCTTGTGGGGATCTGGC										
Mus musculus	RefSeq	ILMN_218385	ILMN_218385	CACHD1	NM_198037.1	NM_198037.1		320508	39930562	NM_198037.1	Cachd1	NP_932154.1	ILMN_1241872	004590035	S	1162	CCACAGTCCAAGCACATAGTCGTGATTCTGGACCATGGGGCCTCAGTCAC	4	+	100624636-100624685	4qC6	Mus musculus cache domain containing 1 (Cachd1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	mKIAA1573; B430218L07Rik; Vwcd1; RP23-29O24.1; AI852726; 1190007F10Rik	mKIAA1573; B430218L07Rik; Vwcd1; RP23-29O24.1; AI852726; 1190007F10Rik
Mus musculus	RefSeq	ILMN_218385	ILMN_218385	CACHD1	NM_198037.1	NM_198037.1		320508	39930562	NM_198037.1	Cachd1	NP_932154.1	ILMN_1248895	004480152	S	4825	GAGAGATTCTCAGCCTTCACCCTGGCTGTTATGTGCGATGTGGTTCTCTG	4	+	100676213-100676262	4qC6	Mus musculus cache domain containing 1 (Cachd1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	mKIAA1573; B430218L07Rik; Vwcd1; RP23-29O24.1; AI852726; 1190007F10Rik	mKIAA1573; B430218L07Rik; Vwcd1; RP23-29O24.1; AI852726; 1190007F10Rik
Mus musculus	RefSeq	ILMN_217901	ILMN_217901	TMEM111	NM_175101.3	NM_175101.3		66087	142383973	NM_175101.3	Tmem111	NP_780310.1	ILMN_2689083	003940630	S	1429	GCACAGCGCTCCCCGCACTGTTCACTTGAGCCTACAAAGGACGCAGAGAA	6	-	113465360-113465409	6qE3	Mus musculus transmembrane protein 111 (Tmem111), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610039A15Rik; AI225901; AW260416	0610039A15Rik; AI225901; AW260416
Mus musculus	RefSeq	ILMN_217901	ILMN_217901	TMEM111	NM_175101.3	NM_175101.3		66087	142383973	NM_175101.3	Tmem111	NP_780310.1	ILMN_1228253	003370767	S	741	GTCACGAATGATGCAGGAGCAGATGACAGGAGCAGCGATGGCCATGCCTG	6	-	113467113-113467162	6qE3	Mus musculus transmembrane protein 111 (Tmem111), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610039A15Rik; AI225901; AW260416	0610039A15Rik; AI225901; AW260416
Mus musculus	RefSeq	ILMN_214273	ILMN_214273	GRIPAP1	NM_207670.1	NM_207670.1		54645	46592838	NM_207670.1	Gripap1	NP_997553.1	ILMN_2893187	007380427	S	2590	TGTGGCTGGTGTTGGTGACCCTGATGTATGGCAGAGCCCTTGGGGAGAAG	X	+	7397357-7397406	XqA1.1	Mus musculus GRIP1 associated protein 1 (Gripap1), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			DXImx47e; AI854681; mKIAA1167; GRASP-1; Sfc10	DXImx47e; AI854681; mKIAA1167; GRASP-1; Sfc10
Mus musculus	RefSeq	ILMN_214273	ILMN_214273	GRIPAP1	NM_207670.1	NM_207670.1		54645	46592838	NM_207670.1	Gripap1	NP_997553.1	ILMN_2646241	002760113	S	2685	CCAGGGTCATCCGCCTTCAACTCTGCATGAGATCTCCCTCCTAGAGACCA	X	+	7397452-7397501	XqA1.1	Mus musculus GRIP1 associated protein 1 (Gripap1), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			DXImx47e; AI854681; mKIAA1167; GRASP-1; Sfc10	DXImx47e; AI854681; mKIAA1167; GRASP-1; Sfc10
Mus musculus	RefSeq	ILMN_211624	ILMN_211624	ACVR2A	NM_007396.3	NM_007396.3		11480	142364296	NM_007396.3	Acvr2a	NP_031422.2	ILMN_2617775	002350441	S	4458	TTTGCAGGGCATTTTAGTGTTTGGTTTACAGTAAGTGCAGAATGGGCAGA	2	+	48757609-48757658	2qC1.1	Mus musculus activin receptor IIA (Acvr2a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A series of molecular signals generated as a consequence of any member of the activin family binding to a cell surface receptor [goid 32924] [evidence IEA]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence ISO]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IGI]; The hardening, enlarging and rising of the penis which often occurs in the sexually aroused male and enables sexual intercourse. Achieved by increased inflow of blood into the vessels of erectile tissue, and decreased outflow [goid 43084] [evidence IMP]; The expulsion of seminal fluid, thick white fluid containing spermatozoa, from the male genital tract [goid 42713] [evidence IMP]; Any process that modulates the activity of the enzyme nitric-oxide synthase [goid 50999] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence ISO]; Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway [goid 30510] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with activin, one of two gonadal glycoproteins related to transforming growth factor beta, to initiate a change in cell activity [goid 17002] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]; Interacting selectively with inhibin beta-A [goid 48186] [evidence IDA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [evidence IPI]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IPI]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IMP]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IPI]	tActRII; ActRIIa; Acvr2	tActRII; ActRIIa; Acvr2
Mus musculus	RefSeq	ILMN_213503	ILMN_257052	RNF213	NM_001040005.2	NM_001040005.2		629974	142375267	NM_001040005.2	Rnf213	NP_001035094.1	ILMN_1229455	001470605	S	2056	CAGCCCCACACGTCTTGCTGTAAGGCCCCTTCTGGCTTTGAACTAGGCAT	11	+	119348499-119348548	11qE2	Mus musculus ring finger protein 213 (Rnf213), mRNA.				D11Ertd759e; 6030403J01; mKIAA1554	D11Ertd759e; 6030403J01; mKIAA1554
Mus musculus	RefSeq	ILMN_199766	ILMN_199766	LOC382972	XM_356781.1	XM_356781.1			38076992	XM_356781.1	LOC382972		ILMN_1214840	000620044	S	560	GGAACTTGGTCCACCCAACGCAACTAACCTCACCACGGTTTCAGTGTGGC										
Mus musculus	RefSeq	ILMN_216609	ILMN_322883	LOC100045040	XR_031278.1	XR_031278.1		100045040	149258439	XR_031278.1	LOC100045040		ILMN_1219113	002470575	S	1644	GTGTTTATGGTATCGCTGCCTTCGTGGAAGTCCGAGGGCAGTCAGATGAG					PREDICTED: Mus musculus similar to ING1 protein (LOC100045040), misc RNA.					
Mus musculus	RefSeq	ILMN_216609	ILMN_322883	LOC100045040	XR_031278.1	XR_031278.1		100045040	149258439	XR_031278.1	LOC100045040		ILMN_2673174	000130500	S	2636	GTTTCTGAGTGGTTTTTAAAATCACATTTCATGATACACGAAAGTCCTAT					PREDICTED: Mus musculus similar to ING1 protein (LOC100045040), misc RNA.					
Mus musculus	RefSeq	ILMN_185464	ILMN_229757	MRPL32	NM_029271.2	NM_029271.2		75398	142372971	NM_029271.2	Mrpl32	NP_083547.1	ILMN_2695342	004490397	S	576	AGAATTGAACTAAAAAATGTTAAAAAGATAATTTCATAGTTAGGCACTTA	13	-	14702710-14702752:14702753-14702759	13qA1	Mus musculus mitochondrial ribosomal protein L32 (Mrpl32), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610033O15Rik	0610033O15Rik
Mus musculus	RefSeq	ILMN_221278	ILMN_221278	FGF3	NM_008007.1	NM_008007.1		14174	6679782	NM_008007.1	Fgf3	NP_032033.1	ILMN_1231254	002320753	S	472	AATGGCAAGGGTCGGCCACGCAGGGGCTTCAAGACCCGCCGCACACAAAA	7	+	152028627-152028676	7qF5	Mus musculus fibroblast growth factor 3 (Fgf3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Int-2; Fgf-3; Int-P	Int-2; Fgf-3; Int-P
Mus musculus	RefSeq	ILMN_223209	ILMN_223209	CXXC5	NM_133687.2	NM_133687.2		67393	59709446	NM_133687.2	Cxxc5	NP_598448.1	ILMN_2760782	002630220	S	1525	CATCAACAACAACAAGAGAGGTAAAGACGAATCTATAAAGTACCGAGACT	18	+	36020595-36020644	18qB2	Mus musculus CXXC finger 5 (Cxxc5), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4930415K17Rik; MGC101987	4930415K17Rik; MGC101987
Mus musculus	RefSeq	ILMN_202502	ILMN_223209	CXXC5	NM_133687.2	NM_133687.2		67393	59709446	NM_133687.2	Cxxc5	NP_598448.1	ILMN_1233348	001090719	S	222	CTCCCCAGGCATCTCTATTGTGGGCAGCCGTGCTACACGCTCAACTCTGA	18	+	36018099-36018148	18qB2	Mus musculus CXXC finger 5 (Cxxc5), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4930415K17Rik; MGC101987	4930415K17Rik; MGC101987
Mus musculus	MEEBO	ILMN_221337	ILMN_221337	6030422M02RIK	scl0240697.10_304	NM_177722.2			31343206	NM_177722.2	6030422M02Rik		ILMN_2734168	007150390	S	2746	CTCCACATCATCTGTTATAAGATTTTATCTCCTTGTTTCCTCGTACCAAG										
Mus musculus	RefSeq	ILMN_222038	ILMN_246409	UBE2O	NM_173755.3	NM_173755.3		217342	50234895	NM_173755.3	Ube2o	NP_776116.2	ILMN_1245815	004290647	S	4831	GCTCCAGGTAGAGAGGATGCCTGCCGGTGAGCACATTACAGCTCTTGTCG	11	-	116399378-116399427	11qE2	Mus musculus ubiquitin-conjugating enzyme E2O (Ube2o), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	mKIAA1734; RP23-193A16.5; E2-230K; B230113M03Rik; 9630022H21	mKIAA1734; RP23-193A16.5; E2-230K; B230113M03Rik; 9630022H21
Mus musculus	RefSeq	ILMN_214987	ILMN_214987	SLC13A4	NM_172892.1	NM_172892.1		243755	27370363	NM_172892.1	Slc13a4	NP_766480.1	ILMN_2827072	003190246	S	3307	CCCAAAGGTGTTGCCAGTCCTTCCTATGCATCCACGAGCCCTTTGAGGGG	6	-	35198174-35198223	6qB1	Mus musculus solute carrier family 13 (sodium/sulfate symporters), member 4 (Slc13a4), mRNA.				9630060C05Rik; SUT1; SUT-1	9630060C05Rik; SUT1; SUT-1
Mus musculus	RefSeq	ILMN_246861	ILMN_246861	AKNA	NM_001045514.1	NM_001045514.1		100182	113865876	NM_001045514.1	Akna	NP_001038979.1	ILMN_2787785	001070703	S	5064	CTGCTCATGTAGGCCAGGAAGCACCCAGCAGCCTCAGACATACCCACTAT	4	-	63028432-63028481	4qC1	Mus musculus AT-hook transcription factor (Akna), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	mKIAA1968; AI597013; RP23-340H1.6; MGC116630	mKIAA1968; AI597013; RP23-340H1.6; MGC116630
Mus musculus	RefSeq	ILMN_210432	ILMN_210432	AMDHD2	NM_172935.4	NM_172935.4		245847	146198690	NM_172935.4	Amdhd2	NP_766523.2	ILMN_2605556	005810482	S	171	CGGGGGCCGAATCCTGGACCCAGAAAAGCTGTTTTTTGAGGAGAGGCGTG				17qA3.3	Mus musculus amidohydrolase domain containing 2 (Amdhd2), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IEA]	Catalysis of the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetate [goid 8448] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	5730457F11Rik	5730457F11Rik
Mus musculus	RefSeq	ILMN_220550	ILMN_220550	MAB21L1	NM_010750.2	NM_010750.2		17116	31560806	NM_010750.2	Mab21l1	NP_034880.1	ILMN_1212752	002470369	S	1989	GGTGATCAGAACTGAAATTACCATTTTGGAAACTTTCAGACATTTCCCAC	3	+	55588435-55588484	3qC	Mus musculus mab-21-like 1 (C. elegans) (Mab21l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]		AW047968	AW047968
Mus musculus	RefSeq	ILMN_220550	ILMN_220550	MAB21L1	NM_010750.2	NM_010750.2		17116	31560806	NM_010750.2	Mab21l1	NP_034880.1	ILMN_2745902	005260372	S	2115	AGTTTACATTTTGTTTCAAATATATTGCTTGTTCTAACATTCCGTAAGTA	3	+	55588561-55588610	3qC	Mus musculus mab-21-like 1 (C. elegans) (Mab21l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]		AW047968	AW047968
Mus musculus	MEEBO	ILMN_212320	ILMN_212320	CDKAL1	scl0068916.1_226	NM_144536.1			21617852	NM_144536.1	Cdkal1		ILMN_2625114	004670537	S	2393	GGCACCCACAAACTTTCAAACAAACCATGATCCTTTCCTGACACACCGAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_243085	ILMN_243085	HIVEP3	NM_010657.3	NM_010657.3		16656	124107624	NM_010657.3	Hivep3	NP_034787.2	ILMN_3151547	006590605	A	7565	TACACTCTCGTCAGAGCTGGAAGAGGAAAGGACCGGCAGAGGCCCAGGAA	4	+	119806560-119806609	4qD2.1	Mus musculus human immunodeficiency virus type I enhancer binding protein 3 (Hivep3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]	E030045D18Rik; Shn3; Zas3; Krc; Schnurri-3; A130075N07; AI848000; 2900056N03Rik; Rc; KBP1	E030045D18Rik; Shn3; Zas3; Krc; Schnurri-3; A130075N07; AI848000; 2900056N03Rik; Rc; KBP1
Mus musculus	RefSeq	ILMN_243085	ILMN_243085	HIVEP3	NM_010657.3	NM_010657.3		16656	124107624	NM_010657.3	Hivep3	NP_034787.2	ILMN_3072769	006450424	I	8504	GGCAGGAACCAATCTACCACTCCCCACCCTACCCGACCAAGGACATTATC	4	+	119807499-119807548	4qD2.1	Mus musculus human immunodeficiency virus type I enhancer binding protein 3 (Hivep3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]	E030045D18Rik; Shn3; Zas3; Krc; Schnurri-3; A130075N07; AI848000; 2900056N03Rik; Rc; KBP1	E030045D18Rik; Shn3; Zas3; Krc; Schnurri-3; A130075N07; AI848000; 2900056N03Rik; Rc; KBP1
Mus musculus	RefSeq	ILMN_217609	ILMN_250643	ECHDC1	NM_025855.3	NM_025855.3		52665	142388371	NM_025855.3	Echdc1	NP_080131.3	ILMN_2685428	002350619	S	2637	GGTCTTCTTGAGATAGAAATGTAAAGCTGCAGCTAATAAGTTTCAGAATC	10	+	29066162-29066211	10qA4	Mus musculus enoyl Coenzyme A hydratase domain containing 1 (Echdc1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	1700028A24Rik; D10Ertd667e; AI930038; AI314462	1700028A24Rik; D10Ertd667e; AI930038; AI314462
Mus musculus	RefSeq	ILMN_208976	ILMN_208976	CLMN	NM_053155.2	NM_053155.2		94040	100816763	NM_053155.2	Clmn	NP_444385.2	ILMN_2591370	007560136	S	3058	TCTACGGCATCAGAGCAGACATGAAGCGCGAGTACAAACATGCCAGGCTG	12	-	106011396-106011445	12qE	Mus musculus calmin (Clmn), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AI428889; 9330188N17Rik; KIAA1188; mKIAA1188	AI428889; 9330188N17Rik; KIAA1188; mKIAA1188
Mus musculus	RefSeq	ILMN_185716	ILMN_185716	TLX3	NM_019916.1	NM_019916.1		27140	9910537	NM_019916.1	Tlx3	NP_064300.1	ILMN_1217773	002320133	S	737	ACGCCTTCCAGAAGAGCCTCAACGATTCCATCCAGCCCGACCCGCTCTGT	11	-	33101368-33101417	11qA4	Mus musculus T-cell leukemia, homeobox 3 (Tlx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whereby a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed [goid 48665] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Tlx1l2; Rnx; Hox11l2	Tlx1l2; Rnx; Hox11l2
Mus musculus	MEEBO	ILMN_185160	ILMN_185160	CRRY	scl15731.3_14				52426749	NM_013499	Crry		ILMN_2688631	001170484	S	401	GGAACCCAGCGCCATTTCTGGGTGGGACTGCTTTCTACACCATTTGCCGT										
Mus musculus	MEEBO	ILMN_185160	ILMN_185160	CRRY	scl15731.3_14				52426749	NM_013499	Crry		ILMN_2424680	001570368	S	18	GAACATCTGTGGATTTCTCAGCAAACAACTTAGAACAAGTAGAGACAGCT										
Mus musculus	MEEBO	ILMN_185160	ILMN_185160	CRRY	scl15731.3_14				52426749	NM_013499	Crry		ILMN_1234997	004060682	S	399	CCGGAACCCAGCGCCATTTCTGGGTGGGACTGCTTTCTACACCATTTGCC										
Mus musculus	RefSeq	ILMN_203105	ILMN_325053	LOC672445	XM_001478741.1	XM_001478741.1		672445	149270112	XM_001478741.1	LOC672445	XP_001478791.1	ILMN_1229907	002810500	S	818	CCAGAGAGCTACTGGGCACGAGAAGGACGGCGAGGTACTTGACGATTTTC				18qD3	PREDICTED: Mus musculus similar to engrailed homeobox 1 (LOC672445), mRNA.					
Mus musculus	RefSeq	ILMN_188471	ILMN_188471	V1RG3	NM_134204.2	NM_134204.2		171238	120300966	NM_134204.2	V1rg3	NP_598965.2	ILMN_2452957	001230070	S	766	GTTACGGCCTACTCCAAATACCCAGAGCTTTGGGGAGTGAGTGTATTTAC	7	+	12779079-12779128	7qA1	Mus musculus vomeronasal 1 receptor, G3 (V1rg3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	MEEBO	ILMN_188614	ILMN_188614	THUMPD2	scl49580.12.1_90				51770417	XM_128791	Thumpd2		ILMN_2524434	004290092	S	1480	AAGAAGGCACAAGCTTCGGGACTGTCCTCAGCTGAATGCCATGAGCCAGG								Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221419	ILMN_221419	GDF15	NM_011819.1	NM_011819.1		23886	6753967	NM_011819.1	Gdf15	NP_035949.1	ILMN_2735350	000650524	S	1318	CCCCGGTGGTTCTTATGCACAGGACAGACAGTGGTGTGTCACTGCAGACT	8	-	73153467-73153516	8qB3.3	Mus musculus growth differentiation factor 15 (Gdf15), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	NAG-1; SBF; MIC-1	NAG-1; SBF; MIC-1
Mus musculus	MEEBO	ILMN_223873	ILMN_223873	PIK3C2G	scl29407.39.1_52				6755059	NM_011084	Pik3c2g		ILMN_1233876	003130309	S	3272	ATCCATTGTCATTGTGTCTCCCAGCCTCCAATGTGCTCACACCTTAAGTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate [goid 35005] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185042	ILMN_185042	USP38	NM_027554.2	NM_027554.2		74841	34328300	NM_027554.2	Usp38	NP_081830.2	ILMN_3072839	005870064	I	1633	ACTCCGGATTCCCAGATCTCTATGAGCCTATTCTGGAGGCAGTAAAGGAC	8	-	83517285-83517288:83519581-83519626	8qC2	Mus musculus ubiquitin specific peptidase 38 (Usp38), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AA536967; mKIAA1891; AU044701; 4833420O05Rik; 4631402N15Rik; AW544820	AA536967; mKIAA1891; AU044701; 4833420O05Rik; 4631402N15Rik; AW544820
Mus musculus	RefSeq	ILMN_185042	ILMN_185042	USP38	NM_027554.2	NM_027554.2		74841	34328300	NM_027554.2	Usp38	NP_081830.2	ILMN_3151631	006660086	A	4183	CACAAGGTGCATGACGCCAGAGGGCAGGGGTTTTAACTGAACTTTGTAGG	8	-	83505084-83505133	8qC2	Mus musculus ubiquitin specific peptidase 38 (Usp38), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AA536967; mKIAA1891; AU044701; 4833420O05Rik; 4631402N15Rik; AW544820	AA536967; mKIAA1891; AU044701; 4833420O05Rik; 4631402N15Rik; AW544820
Mus musculus	RefSeq	ILMN_185042	ILMN_185042	USP38	NM_027554.2	NM_027554.2		74841	34328300	NM_027554.2	Usp38	NP_081830.2	ILMN_2423692	005080438	S	19	TTTTTCCTTTGAGACACATGCCTTACACATAAAATATAATCTGCTTCATG	8	-	83538737-83538786	8qC2	Mus musculus ubiquitin specific peptidase 38 (Usp38), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AA536967; mKIAA1891; AU044701; 4833420O05Rik; 4631402N15Rik; AW544820	AA536967; mKIAA1891; AU044701; 4833420O05Rik; 4631402N15Rik; AW544820
Mus musculus	RefSeq	ILMN_188482	ILMN_244704	XK	NM_023500.2	NM_023500.2		22439	134053936	NM_023500.2	Xk	NP_075989.1	ILMN_2453051	002340372	S	1603	GCAGGGACTAAGGCACGAAGTTAGCTGTCAGTTCCCTGTGAGCTGCTACC	X	+	8886931-8886980	XqA1.1	Mus musculus Kell blood group precursor (McLeod phenotype) homolog (Xk), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1810038K19Rik; XRG1; Xkh	1810038K19Rik; XRG1; Xkh
Mus musculus	RefSeq	ILMN_212776	ILMN_212776	SOX6	NM_011445.3	NM_011445.3		20679	144446087	NM_011445.3	Sox6	NP_035575.1	ILMN_2702323	004830239	S	1178	CCAAGGCTAAAGGGCATAAGTGACCGTTTTGGCAGGAATTTGGACCCCTC	7	-	122722572-122722621	7qF1	Mus musculus SRY-box containing gene 6 (Sox6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual [goid 35051] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]; Any mechanism, at the level of transcription or post-transcription, causing long-term gene inactivation [goid 16458] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	AI987981	AI987981
Mus musculus	RefSeq	ILMN_213923	ILMN_213923	FN3K	NM_022014.2	NM_022014.2		63828	118130422	NM_022014.2	Fn3k	NP_071297.1	ILMN_1223313	000150538	S	812	ATCGGAAGATCCCAAAGGCTCCAGGGTTCGACAAGCGCCTGCTGCTGTAC	11	+	121311625-121311674	11qE2	Mus musculus fructosamine 3 kinase (Fn3k), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	The chemical reactions and pathways involving fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group [goid 30389] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of fructosamine to form fructosamine-3-kinase [goid 30387] [evidence IDA]	2310074G21Rik	2310074G21Rik
Mus musculus	RefSeq	ILMN_190276	ILMN_190276	ZFP82	NM_177889.3	NM_177889.3		330502	83423529	NM_177889.3	Zfp82	NP_808557.2	ILMN_3097221	002570026	A	1371	ACTGTGGGAAGGCGTTTAGAGTTCGACAGCAGCTAACGCTCCATCAGAGG	7	-	30841696-30841745	7qB1	Mus musculus zinc finger protein 82 (Zfp82), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	A030010D05; mszf3; KRAB16	A030010D05; mszf3; KRAB16
Mus musculus	RefSeq	ILMN_190276	ILMN_190276	ZFP82	NM_177889.3	NM_177889.3		330502	83423529	NM_177889.3	Zfp82	NP_808557.2	ILMN_3163235	002120753	A	1639	CAGACTCCTCTCTCAGCTCACACAGCATCAGAGTGTTCATGCCGGGGAGA	7	-	30841428-30841477	7qB1	Mus musculus zinc finger protein 82 (Zfp82), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	A030010D05; mszf3; KRAB16	A030010D05; mszf3; KRAB16
Mus musculus	RefSeq	ILMN_222670	ILMN_222670	COPB2	NM_015827.2	NM_015827.2		50797	142344213	NM_015827.2	Copb2	NP_056642.1	ILMN_2753196	002140128	S	2909	GGGGGAACATAGCCACTTCATCTTCAGGAGTTGATGGGCAGCGTTTAAGT	9	+	98488660-98488709	9qE3.3	Mus musculus coatomer protein complex, subunit beta 2 (beta prime) (Copb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AI256832	AI256832
Mus musculus	Riken	ILMN_202338	ILMN_202338	5830418G11RIK	ri|5830418G11|PX00038P20|AK017939|1988					AK017939	5830418G11Rik		ILMN_2548831	006510202	S	1194	CATGCTGTCTTGCTGGTTCTCAGATCCTTCCAAACTGGGGGACCTAGGCA										
Mus musculus	Riken	ILMN_203534	ILMN_203534	C430015N18RIK	ri|C430015N18|PX00078J06|AK049477|3269					AK049477	C430015N18Rik		ILMN_2558050	007100017	S	3217	CTCACTTTAAGAAAGCATTATCTGAACTGAGACTTGAGTCAGTAGCCAGC										
Mus musculus	RefSeq	ILMN_211045	ILMN_211045	APLN	NM_013912.3	NM_013912.3		30878	123702126	NM_013912.3	Apln	NP_038940.1	ILMN_2611906	001430296	S	3093	GAGTTGCTTGATGAATGAGATAACCTGGAAAATAAACTTCGAGGAGTTCG	X	-	45378328-45378377	XqA4	Mus musculus apelin (Apln), mRNA.		The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISA]	6030430G11Rik; Apel	6030430G11Rik; Apel
Mus musculus	RefSeq	ILMN_224788	ILMN_224788	LOC434172	NM_001033782.1	NM_001033782.1		434172	85702094	NM_001033782.1	LOC434172	NP_001028954.1	ILMN_3032304	000160692	I	1	GACAGGTACCCTGTGACCAGTGAGCTCTCTTTGATACTGGACACACTCGC	7	+	41057480-41057529	7qB3	Mus musculus similar to hypothetical protein 4921507A12 (LOC434172), mRNA.					
Mus musculus	RefSeq	ILMN_224788	ILMN_224788	LOC434172	NM_001033782.1	NM_001033782.1		434172	85702094	NM_001033782.1	LOC434172	NP_001028954.1	ILMN_3105802	002900348	A	2365	CCCATTTGGTCACCTCGAGGCCTGTACCCTACAGAGCATCCTCTCACACT	7	+	41062668-41062717	7qB3	Mus musculus similar to hypothetical protein 4921507A12 (LOC434172), mRNA.					
Mus musculus	RefSeq	ILMN_211654	ILMN_211654	DPF3	NM_058212.1	NM_058212.1		70127	17158030	NM_058212.1	Dpf3	NP_478119.1	ILMN_2628799	000620273	S	1119	TCTGGTCATTGTTCTAGTTCTGATATATATTTTTAAATGAAAGACAACTT				12qD1	Mus musculus D4, zinc and double PHD fingers, family 3 (Dpf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C78788; 2810403B03Rik; CERD4; cer-d4	C78788; 2810403B03Rik; CERD4; cer-d4
Mus musculus	RefSeq	ILMN_211654	ILMN_211654	DPF3	NM_058212.1	NM_058212.1		70127	17158030	NM_058212.1	Dpf3	NP_478119.1	ILMN_2853983	005900386	S	974	ACGGCTTTGATGAGGACGATTTGGAAGAGCCTCGCTCCTGTCGAGGACGC	12	-	84370269-84370318	12qD1	Mus musculus D4, zinc and double PHD fingers, family 3 (Dpf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C78788; 2810403B03Rik; CERD4; cer-d4	C78788; 2810403B03Rik; CERD4; cer-d4
Mus musculus	RefSeq	ILMN_221336	ILMN_221336	SLC6A17	NM_172271.2	NM_172271.2		229706	142370279	NM_172271.2	Slc6a17	NP_758475.1	ILMN_2734160	006770255	S	6250	CCAGGGCCCCCACTTCATCTCCCCCACCCTGCTGTACAATAAAGTGTCTG	3	-	107270474-107270523	3qF2.3	Mus musculus solute carrier family 6 (neurotransmitter transporter), member 17 (Slc6a17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	AW490886; Ntt4; D130012J15Rik	AW490886; Ntt4; D130012J15Rik
Mus musculus	RefSeq	ILMN_232573	ILMN_232573	DUSP16	NM_130447.2	NM_130447.2		70686	114205411	NM_130447.2	Dusp16	NP_569714.2	ILMN_3112011	005550086	A	4845	GTGGTGGTTAGGTCTCCTCACGTAAGCACAGGGAAGTCTGTGAAGTCTAC	6	-	134665703-134665752	6qG1	Mus musculus dual specificity phosphatase 16 (Dusp16), transcript variant A1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IDA]	Mkpm; D6Ertd213e; MKP-7; MKP7; AW558566; 3830417M17Rik	Mkpm; D6Ertd213e; MKP-7; MKP7; AW558566; 3830417M17Rik
Mus musculus	RefSeq	ILMN_232573	ILMN_232573	DUSP16	NM_130447.2	NM_130447.2		70686	114205411	NM_130447.2	Dusp16	NP_569714.2	ILMN_3037810	006290129	I	2249	CCTTTTTGGCCTTTCCACCAGCCAGCAACACCTCACCAAGTCTGCAGGGC	6	-	134668299-134668348	6qG1	Mus musculus dual specificity phosphatase 16 (Dusp16), transcript variant A1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IDA]	Mkpm; D6Ertd213e; MKP-7; MKP7; AW558566; 3830417M17Rik	Mkpm; D6Ertd213e; MKP-7; MKP7; AW558566; 3830417M17Rik
Mus musculus	RefSeq	ILMN_209951	ILMN_209951	MPG	NM_010822.2	NM_010822.2		268395	31560564	NM_010822.2	Mpg	NP_034952.1	ILMN_2600753	000110398	S	1236	AAGGGACCGGCCGGAAAGGGATGACAAGGACATAACCTGTATGTGTATAA	11	+	32131585-32131634	11qA4	Mus musculus N-methylpurine-DNA glycosylase (Mpg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of alkylated DNA; recognizes and removes alkylated purines and pyrimidines by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic or apyrimidinic (AP) site. Enzyme has broad substrate specificity, being able to recognize alkylpurines, alkylpyrimidines or ethenopurines [goid 3905] [evidence IMP]; Catalysis of the hydrolysis of alkylated DNA; recognizes and removes alkylated purines and pyrimidines by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic or apyrimidinic (AP) site. Enzyme has broad substrate specificity, being able to recognize alkylpurines, alkylpyrimidines or ethenopurines [goid 3905] [evidence IDA]	9830006D05; Mid1; APNG; Aag; AI326268	9830006D05; Mid1; APNG; Aag; AI326268
Mus musculus	RefSeq	ILMN_209951	ILMN_209951	MPG	NM_010822.2	NM_010822.2		268395	31560564	NM_010822.2	Mpg	NP_034952.1	ILMN_2600747	001090102	S	1231	TCCACAAGGGACCGGCCGGAAAGGGATGACAAGGACATAACCTGTATGTG	11	+	32131580-32131629	11qA4	Mus musculus N-methylpurine-DNA glycosylase (Mpg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of alkylated DNA; recognizes and removes alkylated purines and pyrimidines by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic or apyrimidinic (AP) site. Enzyme has broad substrate specificity, being able to recognize alkylpurines, alkylpyrimidines or ethenopurines [goid 3905] [evidence IMP]; Catalysis of the hydrolysis of alkylated DNA; recognizes and removes alkylated purines and pyrimidines by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic or apyrimidinic (AP) site. Enzyme has broad substrate specificity, being able to recognize alkylpurines, alkylpyrimidines or ethenopurines [goid 3905] [evidence IDA]	9830006D05; Mid1; APNG; Aag; AI326268	9830006D05; Mid1; APNG; Aag; AI326268
Mus musculus	RefSeq	ILMN_193715	ILMN_209951	MPG	NM_010822.2	NM_010822.2		268395	31560564	NM_010822.2	Mpg	NP_034952.1	ILMN_2747687	000620634	S	1561	CCAGCCTCCCTCTTCAATCTGGTCCTTACGGCAGCTTAATATTGCTGAGC	11	+	32131910-32131959	11qA4	Mus musculus N-methylpurine-DNA glycosylase (Mpg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of alkylated DNA; recognizes and removes alkylated purines and pyrimidines by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic or apyrimidinic (AP) site. Enzyme has broad substrate specificity, being able to recognize alkylpurines, alkylpyrimidines or ethenopurines [goid 3905] [evidence IMP]; Catalysis of the hydrolysis of alkylated DNA; recognizes and removes alkylated purines and pyrimidines by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic or apyrimidinic (AP) site. Enzyme has broad substrate specificity, being able to recognize alkylpurines, alkylpyrimidines or ethenopurines [goid 3905] [evidence IDA]	9830006D05; Mid1; APNG; Aag; AI326268	9830006D05; Mid1; APNG; Aag; AI326268
Mus musculus	Riken	ILMN_202899	ILMN_202899	CAMK2D	ri|6430579P05|PX00047N07|AK032524|4207					AK032524	Camk2d		ILMN_1217600	006280187	S	3848	ATGGGGAGGTAGGAATTGGAGACTGAAGAACCCCAAGAAGCTCTCAGGCC						Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]		
Mus musculus	RefSeq	ILMN_218236	ILMN_218236	OLFR481	NM_146925.1	NM_146925.1		258927	27544956	NM_146925.1	Olfr481	NP_667136.1	ILMN_2693348	004850639	S	622	GTGAGCACGCTCTCTACGATCATTGTGTCTTACATTTACATCCTGCACTC	7	+	115224931-115224980	7qE3	Mus musculus olfactory receptor 481 (Olfr481), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-39; MOR204-2	MOR204-39; MOR204-2
Mus musculus	RefSeq	ILMN_190143	ILMN_190143	TRIM10	NM_011280.1	NM_011280.1		19824	6755339	NM_011280.1	Trim10	NP_035410.1	ILMN_2467559	002650148	S	2143	TTTGGAGAAGTGGATATGATCAAAGTACACTATATACATTAATTAAATTC	17	+	37011121-37011170	17qB1	Mus musculus tripartite motif-containing 10 (Trim10), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI324236; Herf1; BB139825; Rnf9	AI324236; Herf1; BB139825; Rnf9
Mus musculus	RefSeq	ILMN_190143	ILMN_190143	TRIM10	NM_011280.1	NM_011280.1		19824	6755339	NM_011280.1	Trim10	NP_035410.1	ILMN_2477324	001570520	S	1412	TGGAGGCAGCTGCACTGTAGGTGTGGTCAGAGAAGATGTACGACGGAAGG	17	+	37007232-37007252:37008615-37008643	17qB1	Mus musculus tripartite motif-containing 10 (Trim10), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI324236; Herf1; BB139825; Rnf9	AI324236; Herf1; BB139825; Rnf9
Mus musculus	RefSeq	ILMN_190143	ILMN_190143	TRIM10	NM_011280.1	NM_011280.1		19824	6755339	NM_011280.1	Trim10	NP_035410.1	ILMN_2783997	002340370	S	2013	GCCTCGAGACCTGGATTCCAGGTGAAGCCCTGTAATCAACCAGCTGTGTG	17	+	37009441-37009490	17qB1	Mus musculus tripartite motif-containing 10 (Trim10), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI324236; Herf1; BB139825; Rnf9	AI324236; Herf1; BB139825; Rnf9
Mus musculus	RefSeq	ILMN_207514	ILMN_207514	AI194318	XM_158875.3	XM_158875.3			38075010	XM_158875.3	AI194318		ILMN_2587925	007040408	I	533	GCTTTACCGGTGTGGTCACAGGACACCATAACAATGCCCGGGAGAAGGGT										
Mus musculus	Riken	ILMN_206954	ILMN_206954	NXF1	ri|D930034L10|PX00202L08|AK086527|3511					AK086527	Nxf1		ILMN_2583946	006560653	S	2714	AATTAAGAAGGGGGTGCCCCTGGTGAGGAGGGGAATGGGGGTTCTTGTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IDA]; Intranuclear foci at which aggregated proteins have been sequestered [goid 42405] [evidence IDA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of RNA from the nucleus to the cytoplasm [goid 6405] [evidence IDA]; The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm [goid 16973] [evidence IPI]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]		
Mus musculus	RefSeq	ILMN_185828	ILMN_325188	LOC100048169	XM_001479670.1	XM_001479670.1		100048169	149249504	XM_001479670.1	LOC100048169	XP_001479720.1	ILMN_2430359	005080296	S	453	GGTGGCTTCATGGAAGGTTCCTGTTTGAGGAGTTCAGGTCTACTGTCTCC					PREDICTED: Mus musculus hypothetical protein LOC100048169 (LOC100048169), mRNA.					
Mus musculus	RefSeq	ILMN_211187	ILMN_242571	ESR2	NM_207707.1	NM_207707.1		13983	46877095	NM_207707.1	Esr2	NP_997590.1	ILMN_1236030	006040343	S	2619	CCTGCTTGGCTTACATAACTAGATTATTCGGTCTGTCTGAATGTGGTCAC	12	-	77222099-77222148	12qC3	Mus musculus estrogen receptor 2 (beta) (Esr2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	ERbeta; Estrb; ER[b]	ERbeta; Estrb; ER[b]
Mus musculus	RefSeq	ILMN_242571	ILMN_242571	ESR2	NM_207707.1	NM_207707.1		13983	46877095	NM_207707.1	Esr2	NP_997590.1	ILMN_3115826	003890138	A	3093	AGAAGCCTGGCCGCATCCAGAAGATGTGGTGCTGGAGAAGGCGCTGAGAA	12	-	77221625-77221674	12qC3	Mus musculus estrogen receptor 2 (beta) (Esr2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	ERbeta; Estrb; ER[b]	ERbeta; Estrb; ER[b]
Mus musculus	RefSeq	ILMN_242571	ILMN_242571	ESR2	NM_207707.1	NM_207707.1		13983	46877095	NM_207707.1	Esr2	NP_997590.1	ILMN_3041053	003990577	I	1497	TCCTCAGAAGACCCTCACTGGCACGTTGCGCAGACGAAGAGTGCTGTCCC	12	-	77241187-77241236	12qC3	Mus musculus estrogen receptor 2 (beta) (Esr2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	ERbeta; Estrb; ER[b]	ERbeta; Estrb; ER[b]
Mus musculus	RefSeq	ILMN_197403	ILMN_197403	LOC238966	XM_138927.3	XM_138927.3			38075592	XM_138927.3	LOC238966		ILMN_1259918	000050093	S	894	GTCAGTCTGGGGTCTACAGTGTCACCCTCATCCTTTTAAGGAATGGGAGG										
Mus musculus	RefSeq	ILMN_197049	ILMN_312222	LOC100045312	XM_001473900.1	XM_001473900.1		100045312	149246494	XM_001473900.1	LOC100045312	XP_001473950.1	ILMN_1225916	000430471	S	216	CGCAGAGGCCATCAAGGTCCTGGTGAAGCTTCAGGCCATCAAGCCCAAGA					PREDICTED: Mus musculus similar to ribosomal protein (LOC100045312), mRNA.					
Mus musculus	Riken	ILMN_201731	ILMN_201731	ELA1	ri|1810062B19|ZX00043I20|AK007931|475					AK007931	Ela1		ILMN_2544139	002120484	S	262	CGGGTTCCTGAGCCCACGGGAGGAAGCGACTAAGCCTTCTGGAAGAATAC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224098	ILMN_235902	BAMBI	NM_026505.2	NM_026505.2		68010	118129835	NM_026505.2	Bambi	NP_080781.1	ILMN_2774722	004050382	S	4808	GCCCTTGGAGGCTGGATTCATTCTACACAGTCACCACCATCAGTTAAAAC	18	+	3516170-3516219	18qA1	Mus musculus BMP and activin membrane-bound inhibitor, homolog (Xenopus laevis) (Bambi), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence ISA]		2610003H06Rik	2610003H06Rik
Mus musculus	RefSeq	ILMN_217283	ILMN_233426	2310061I04RIK	XM_001002280.2	XM_001002280.2		69662	149269293	XM_001002280.2	2310061I04Rik	XP_001002280.1	ILMN_2681419	002970037	S	629	GCTCCCATGACTACACTATATATTCAATGGATGTGGAATTCATCAATGAG				17qB1	PREDICTED: Mus musculus RIKEN cDNA 2310061I04 gene (2310061I04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218460	ILMN_218460	1200011M11RIK	NM_024262.1	NM_024262.1		74133	23956215	NM_024262.1	1200011M11Rik	NP_077224.1	ILMN_3105117	005570465	A	2702	CCTCGTCGCAGGGCAGAGGGCTGAAGCCACATTATGCTCAACTTATGAGG	11	-	86893718-86893767	11qC	Mus musculus RIKEN cDNA 1200011M11 gene (1200011M11Rik), mRNA.				RP23-352L3.2	RP23-352L3.2
Mus musculus	RefSeq	ILMN_218460	ILMN_218460	1200011M11RIK	NM_024262.1	NM_024262.1		74133	23956215	NM_024262.1	1200011M11Rik	NP_077224.1	ILMN_2696126	000580747	S	3108	TTTGGTTACAAGTATTCAGTATTTGGACAATAATTGTTCCATTATTTCAT	11	-	86891297-86891346	11qC	Mus musculus RIKEN cDNA 1200011M11 gene (1200011M11Rik), mRNA.				RP23-352L3.2	RP23-352L3.2
Mus musculus	RefSeq	ILMN_218460	ILMN_218460	1200011M11RIK	NM_024262.1	NM_024262.1		74133	23956215	NM_024262.1	1200011M11Rik	NP_077224.1	ILMN_3031706	006650575	I	354	TGCAGCCGGGGATTCACTTCGCGGAGGTATGGCTACGGCGGAAGGTAACC	11	-	86899876-86899925	11qC	Mus musculus RIKEN cDNA 1200011M11 gene (1200011M11Rik), mRNA.				RP23-352L3.2	RP23-352L3.2
Mus musculus	RefSeq	ILMN_222367	ILMN_222367	CHRM4	NM_007699.1	NM_007699.1		12672	6680939	NM_007699.1	Chrm4	NP_031725.1	ILMN_2748556	006200553	S	1026	CCAAATTGTGACAAAGCAGACAGGCAGTGAATGTGTGACTGCCATCGAGA	2	+	91768431-91768480	2qE1	Mus musculus cholinergic receptor, muscarinic 4 (Chrm4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7197] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4981] [evidence IDA]	M4; Chrm-4	M4; Chrm-4
Mus musculus	RefSeq	ILMN_198504	ILMN_255503	AU022751	NM_001033211.2	NM_001033211.2		102991	142383176	NM_001033211.2	AU022751	NP_001028383.1	ILMN_1258697	005870338	S	1147	ATCCTCTCTAGCAGCCGAAGACTCTCCTCCAAGGCGCCCAGTTCGTATGC	X	-	5658978-5659027	XqA1.1	Mus musculus expressed sequence AU022751 (AU022751), mRNA.				AU023811; MGC117813	AU023811; MGC117813
Mus musculus	RefSeq	ILMN_184268	ILMN_234129	AUP1	NM_007517.3	NM_007517.3		11993	90403600	NM_007517.3	Aup1	NP_031543.2	ILMN_2682623	001850504	S	1359	AATGAGCCCAAAGGAACAGGATGGTACCCAGAGCCGCAGGACGGAGACTG	6	+	83007524-83007528:83007529-83007573	6qC3	Mus musculus ancient ubiquitous protein 1 (Aup1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	AA589454	AA589454
Mus musculus	RefSeq	ILMN_184268	ILMN_234129	AUP1	NM_007517.3	NM_007517.3		11993	90403600	NM_007517.3	Aup1	NP_031543.2	ILMN_1252199	001940520	S	183	TCCCGAGTGACGGCTTCCTGCTGCTCGCGCTACTGCTCTACGCGCCGGTC	6	+	83004907-83004956	6qC3	Mus musculus ancient ubiquitous protein 1 (Aup1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	AA589454	AA589454
Mus musculus	RefSeq	ILMN_212572	ILMN_212572	COL16A1	NM_028266.4	NM_028266.4		107581	142372516	NM_028266.4	Col16a1	NP_082542.2	ILMN_1248099	003830706	S	5020	CCAAAGCTTACAGGACTCTGATGGGTTGTGAATGTTTGTGCTATTCCTGT	4	+	129744421-129744470	4qD2.2	Mus musculus collagen, type XVI, alpha 1 (Col16a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	A530052M23Rik; 2700007F12Rik; CA1F; AI838662	A530052M23Rik; 2700007F12Rik; CA1F; AI838662
Mus musculus	RefSeq	ILMN_231088	ILMN_231088	1600002K03RIK	NM_027207.1	NM_027207.1		69770	58037176	NM_027207.1	1600002K03Rik	NP_081483.1	ILMN_3004151	000460632	S	584	GGGCCTGAGGATCTCTGTGCGCCTTCCTGCTGCTTTGGCAACAATAAATG	10	+	79578181-79578230	10qC1	Mus musculus RIKEN cDNA 1600002K03 gene (1600002K03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197196	ILMN_197196	LOC218244	XM_138614.3	XM_138614.3		218244	94395089	XM_138614.3	LOC218244	XP_138614.3	ILMN_1227829	003440678	S	3120	GGAGACATCTGAACCACACTTTGCCAGTGCCTCTCCTCAAAACCGGCCAG	13	+	49835719-49835768	13qA5	PREDICTED: Mus musculus gene model 272, (NCBI) (LOC218244), mRNA.					
Mus musculus	Riken	ILMN_204350	ILMN_204350	MLSN1	ri|A930017K21|PX00066M20|AK044507|2008					AK044507	Mlsn1		ILMN_1244471	005810386	S	1498	TCTTCGTCTTTGGCCCACACTGGCAGCCACCACCAAGGGGAGAGGAAAAG										
Mus musculus	MEEBO	ILMN_193983	ILMN_193983	5033405K12RIK	scl27726.2.2_9				23956355	NM_153567	5033405K12Rik		ILMN_1223228	000450576	S	20	GCCTGTTGTGCTGAAATTAAACGGAAGATATGTTTTGATAGCCCAACCCC										
Mus musculus	MEEBO	ILMN_194734	ILMN_194734	SCL0001297.1_42	scl0001297.1_42	AK037551.1			26332197	AK037551.1	scl0001297.1_42		ILMN_1226690	007570162	S	20	TGCACCCATGAAGCTTGGTAGTAGCTCATACCTGAATCACCACACTGAGG										
Mus musculus	RefSeq	ILMN_214769	ILMN_214769	AXL	NM_009465.3	NM_009465.3		26362	133892528	NM_009465.3	Axl	NP_033491.2	ILMN_2651715	007100577	S	4031	CTTGAGCCAGTCCCCTATGCCTGTTCTGAAGTGTGGACTCTGGTGCCTCC	7	-	26542330-26542379	7qA3	Mus musculus AXL receptor tyrosine kinase (Axl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI323647; Ufo; Ark; Tyro7	AI323647; Ufo; Ark; Tyro7
Mus musculus	RefSeq	ILMN_213812	ILMN_213812	2810408A11RIK	NM_027419.3	NM_027419.3		70419	118130354	NM_027419.3	2810408A11Rik	NP_081695.2	ILMN_2641063	003360095	S	1246	GGGGCAGCTGGCTAATCTACAGCGCAAGGAATACTACAGCAAAGGAAGGT	11	-	69713877-69713926	11qB3	Mus musculus RIKEN cDNA 2810408A11 gene (2810408A11Rik), mRNA.				RP23-172M21.16; 1700019L01Rik; 4930470J18Rik	RP23-172M21.16; 1700019L01Rik; 4930470J18Rik
Mus musculus	RefSeq	ILMN_213812	ILMN_213812	2810408A11RIK	NM_027419.3	NM_027419.3		70419	118130354	NM_027419.3	2810408A11Rik	NP_081695.2	ILMN_2775037	000870543	S	1551	CGGCTCCAGTGGACTCAGAAAAAAGAACGTAGACCTTGGAAAATGTAGTC	11	-	69713069-69713091:69713208-69713234	11qB3	Mus musculus RIKEN cDNA 2810408A11 gene (2810408A11Rik), mRNA.				RP23-172M21.16; 1700019L01Rik; 4930470J18Rik	RP23-172M21.16; 1700019L01Rik; 4930470J18Rik
Mus musculus	RefSeq	ILMN_216376	ILMN_216376	ITM2B	NM_008410.2	NM_008410.2		16432	133892559	NM_008410.2	Itm2b	NP_032436.1	ILMN_2670375	002970286	S	781	GGACAACCTGGGCTTCTTCATCTACCGACTGTGTCACGACAAGGAGACCT	14	-	73764378-73764427	14qD3	Mus musculus integral membrane protein 2B (Itm2b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]	E25BMM; D14Sel6; AI256040	E25BMM; D14Sel6; AI256040
Mus musculus	RefSeq	ILMN_216376	ILMN_216376	ITM2B	NM_008410.2	NM_008410.2		16432	133892559	NM_008410.2	Itm2b	NP_032436.1	ILMN_2685362	000060427	S	1677	ACATAAAAAATGAAACTATTTTATAAAGTCTAGTTCTCTACATGCAGTTA	14	-	73762084-73762133	14qD3	Mus musculus integral membrane protein 2B (Itm2b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]	E25BMM; D14Sel6; AI256040	E25BMM; D14Sel6; AI256040
Mus musculus	RefSeq	ILMN_198149	ILMN_198149	LOC240066	XM_139874.3	XM_139874.3			38082162	XM_139874.3	LOC240066		ILMN_1257237	003370324	S	1565	GAGGTTCGGGTTCCTGCTGTGCCAAAAACTCTCAAGAAAAAGGTTCCGGC										
Mus musculus	MEEBO	ILMN_191566	ILMN_191566	2610034B04RIK	scl377.1.1_59						2610034B04Rik		ILMN_2480199	001660273	S	16	CAAATAAGAGTGTCCCAGGCAGTGGATATTTGAGAGCTGTCCTGCCCCAC										
Mus musculus	RefSeq	ILMN_213551	ILMN_246269	UBR5	NM_001081359.1	NM_001081359.1		70790	124486932	NM_001081359.1	Ubr5	NP_001074828.1	ILMN_1216823	002470189	S	9506	CCTTGCCACAGTCACCTTTTTTCTTTGTACCCCTCTTTCAGTGCAGGTGG	15	-	37897320-37897369	15qB3.1	Mus musculus ubiquitin protein ligase E3 component n-recognin 5 (Ubr5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	4432411E13Rik; C77315; D030042K14; Edd; AW549941; mKIAA0896; Edd1	4432411E13Rik; C77315; D030042K14; Edd; AW549941; mKIAA0896; Edd1
Mus musculus	RefSeq	ILMN_246269	ILMN_246269	UBR5	NM_001081359.1	NM_001081359.1		70790	124486932	NM_001081359.1	Ubr5	NP_001074828.1	ILMN_3099633	007320288	A	9046	GCTAGTCGCCAACTTCTAGGTCTAACCCCAGCCAAAGATGACAGCAGAAC	15	-	37897780-37897829	15qB3.1	Mus musculus ubiquitin protein ligase E3 component n-recognin 5 (Ubr5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	4432411E13Rik; C77315; D030042K14; Edd; AW549941; mKIAA0896; Edd1	4432411E13Rik; C77315; D030042K14; Edd; AW549941; mKIAA0896; Edd1
Mus musculus	RefSeq	ILMN_191015	ILMN_228861	ABCC10	NM_145140.2	NM_145140.2		224814	102467835	NM_145140.2	Abcc10	NP_660122.1	ILMN_2745985	004070600	S	732	GGAGTGCCATGTGCAGACCAGAAAGGGAATTTACCTCCTCCCGCTGGTTG	17	-	46461934-46461983	17qC	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 10 (Abcc10), transcript variant mrp7A, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	Mrp7; mFLJ00002	Mrp7; mFLJ00002
Mus musculus	RefSeq	ILMN_190465	ILMN_190465	ZFP296	NM_022409.1	NM_022409.1		63872	11967932	NM_022409.1	Zfp296	NP_071854.1	ILMN_2470407	000830521	S	460	GGTGAGCGACCCTACTCCTGTGACCAGTGTTCCTATGCCTGCGCTCAGAG	7	+	20165276-20165325	7qA3	Mus musculus zinc finger protein 296 (Zfp296), mRNA.				2210018A16Rik	2210018A16Rik
Mus musculus	RefSeq	ILMN_190465	ILMN_190465	ZFP296	NM_022409.1	NM_022409.1		63872	11967932	NM_022409.1	Zfp296	NP_071854.1	ILMN_2912729	005670154	S	1050	ACTGGACAAGCACCTGCGGCAGAAGCACCCAGAGATGGCCTGAGCCATAT	7	+	20165866-20165908:20165909-20165915	7qA3	Mus musculus zinc finger protein 296 (Zfp296), mRNA.				2210018A16Rik	2210018A16Rik
Mus musculus	Riken	ILMN_201767	ILMN_201767	2310008I22RIK	ri|2310008I22|ZX00052E19|AK009232|1291					AK009232	2310008I22Rik		ILMN_1216777	002120241	S	211	GCGACTGAAGGCCTACTCCGCCGCCTCTCAGTGCTATTGTCCCGGGGCCT										
Mus musculus	RefSeq	ILMN_216988	ILMN_216988	INSL6	NM_013754.1	NM_013754.1		27356	7305184	NM_013754.1	Insl6	NP_038782.1	ILMN_2677859	000060050	S	516	CTGTGTGATAGGATGCACCAAAGAAGAGATGGCCGTCGCGTGCCTCCCCT	19	-	29395938-29395987	19qC1	Mus musculus insulin-like 6 (Insl6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	RIF1	RIF1
Mus musculus	RefSeq	ILMN_202116	ILMN_322357	2810474C18RIK	XM_001478517.1	XM_001478517.1		72785	149262328	XM_001478517.1	2810474C18Rik	XP_001478567.1	ILMN_2547125	006420373	S	478	CCGCCTAGCCTCCTCTATCCCGATGGTCAAGTTTAGACACCACTAGCATC				11qD	PREDICTED: Mus musculus RIKEN cDNA 2810474C18 gene (2810474C18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214720	ILMN_231060	LOC384373	XM_357605.1	XM_357605.1		384373	38083989	XM_357605.1	LOC384373	XP_357605.1	ILMN_2651144	000940367	S	201	CTTTCGGGATGAGGCTGTTATAGATAATTCACAGTTGCCCTCGGATCGAT	6	+	41065078-41065127		PREDICTED: Mus musculus similar to T-cell receptor beta chain V region CTL-L17 precursor (LOC384373), mRNA.					
Mus musculus	Riken	ILMN_206730	ILMN_206730	D130070L13RIK	ri|D130070L13|PX00186I15|AK083970|2991					AK083970	D130070L13Rik		ILMN_1242536	002940358	S	2625	GCCTCCTGGTAGGTCCTGGATGCCGTTTATACTCTGGTATCGACACAGTG										
Mus musculus	RefSeq	ILMN_220967	ILMN_220967	CCDC126	NM_175098.2	NM_175098.2		57895	31341246	NM_175098.2	Ccdc126	NP_780307.1	ILMN_2729235	002600201	S	2180	GATTCTGCAGTACCGTTCGGTCTCTGAGGAGTCCTGAGCATCTCTGATTT	6	+	49271076-49271125	6qB2.3	Mus musculus coiled-coil domain containing 126 (Ccdc126), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AA675040; AI465320; 6330407D12Rik; MGC143769; AL022711	AA675040; AI465320; 6330407D12Rik; MGC143769; AL022711
Mus musculus	RefSeq	ILMN_217798	ILMN_224630	ZC3H18	NM_001029993.1	NM_001029993.1		76014	71979670	NM_001029993.1	Zc3h18	NP_001025164.1	ILMN_2687723	007380382	S	3163	GAGTAGGGTAAGCGCAGCCATTTTGGATTTTCCAGTCAATGTCTTATTTT	8	+	124940619-124940668	8qE1	Mus musculus zinc finger CCCH-type containing 18 (Zc3h18), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1190001B23Rik; Nhn1	1190001B23Rik; Nhn1
Mus musculus	RefSeq	ILMN_249834	ILMN_249834	A930008G19RIK	NM_212473.1	NM_212473.1		77938	47059501	NM_212473.1	A930008G19Rik	NP_997638.1	ILMN_3121784	007400195	A	4920	CTGTTTGAGGCAGTGTGGTGAATGGCGTGGTGAGCCAGAACCCATCAGGG	7	-	139903928-139903977	7qF3	Mus musculus RIKEN cDNA A930008G19 gene (A930008G19Rik), mRNA.				mKIAA0140; MGC40647	mKIAA0140; MGC40647
Mus musculus	RefSeq	ILMN_249834	ILMN_249834	A930008G19RIK	NM_212473.1	NM_212473.1		77938	47059501	NM_212473.1	A930008G19Rik	NP_997638.1	ILMN_3046219	000130048	I	23	TTGCAGACAACTCTTTTGTTCACGGAAGTTTACACCCGCCACCCCTGGGA	7	-	140004807-140004856	7qF3	Mus musculus RIKEN cDNA A930008G19 gene (A930008G19Rik), mRNA.				mKIAA0140; MGC40647	mKIAA0140; MGC40647
Mus musculus	Riken	ILMN_206531	ILMN_206531	D930044C15RIK	ri|D930044C15|PX00202N14|AK086654|2439					AK086654	D930044C15Rik		ILMN_1227876	006960647	S	2332	GCTCTGTGGTACACATTGTTTAGAGAAGGGAACAGCATGGCGGCACAGGC										
Mus musculus	RefSeq	ILMN_213320	ILMN_213320	CDC42	NM_009861.1	NM_009861.1		12540	6753363	NM_009861.1	Cdc42	NP_033991.1	ILMN_2946862	006480538	S	1729	GTGGGGAGCATACTTTTAACCAACATGGGGACCAGTCAGGGCTATCCCCT	4	-	136875865-136875914	4qD3	Mus musculus cell division cycle 42 homolog (S. cerevisiae) (Cdc42), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence TAS]; The directed movement of the nucleus [goid 7097] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence TAS]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IMP]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence TAS]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IPI]	AI747189; AU018915	AI747189; AU018915
Mus musculus	RefSeq	ILMN_213320	ILMN_213320	CDC42	NM_009861.1	NM_009861.1		12540	6753363	NM_009861.1	Cdc42	NP_033991.1	ILMN_2635946	006770431	S	40	ATATTAAAAGTTGGATACAAAACTGTTTCCGAAATGCAGACAATTAAGTG	4	-	136891955-136891994:136891995-136892004	4qD3	Mus musculus cell division cycle 42 homolog (S. cerevisiae) (Cdc42), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence TAS]; The directed movement of the nucleus [goid 7097] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence TAS]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IMP]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence TAS]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IPI]	AI747189; AU018915	AI747189; AU018915
Mus musculus	RefSeq	ILMN_213320	ILMN_213320	CDC42	NM_009861.1	NM_009861.1		12540	6753363	NM_009861.1	Cdc42	NP_033991.1	ILMN_2688043	003450563	S	687	CGTCATACTAAAAGCAATGTTTAAATCAAACTAAAGATTAAAAATTAAAA	4	-	136876907-136876956	4qD3	Mus musculus cell division cycle 42 homolog (S. cerevisiae) (Cdc42), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence TAS]; The directed movement of the nucleus [goid 7097] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence TAS]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IMP]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence TAS]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IPI]	AI747189; AU018915	AI747189; AU018915
Mus musculus	RefSeq	ILMN_213320	ILMN_213320	CDC42	NM_009861.1	NM_009861.1		12540	6753363	NM_009861.1	Cdc42	NP_033991.1	ILMN_1225564	002490634	S	940	TTTTGTTTAAAAGCAAGCATGCTTGTATTGACTGTAACAGACTAATTCAG	4	-	136876654-136876703	4qD3	Mus musculus cell division cycle 42 homolog (S. cerevisiae) (Cdc42), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence TAS]; The directed movement of the nucleus [goid 7097] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence TAS]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IMP]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence TAS]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IPI]	AI747189; AU018915	AI747189; AU018915
Mus musculus	RefSeq	ILMN_221377	ILMN_221377	TELO2	NM_027880.1	NM_027880.1		71718	21311991	NM_027880.1	Telo2	NP_082156.1	ILMN_2734797	000770128	S	3203	AGCTACTCAGTCTTTACTATACTCGGATGGGGATGTTAGCTGCTGGCTCC	17	-	25236573-25236622	17qA3.3	Mus musculus TEL2, telomere maintenance 2, homolog (S. cerevisiae) (Telo2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]			1200003M09Rik; mKIAA0683	1200003M09Rik; mKIAA0683
Mus musculus	RefSeq	ILMN_201701	ILMN_217664	PLCZ1	NM_054066.4	NM_054066.4		114875	146149119	NM_054066.4	Plcz1	NP_473407.2	ILMN_1233256	000020369	S	567	GCCCATTGAAGAAGTAAAGGGTGAGCGACAGATGTCAATTGAAGGTTTCG				6qG2	Mus musculus phospholipase C, zeta 1 (Plcz1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whereby the egg becomes metabolically active, initiates protein and DNA synthesis and undergoes structural changes to its cortex and/or cytoplasm [goid 7343] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IDA]	1700041H07Rik; PLCzeta; MGC123405; MGC123406	1700041H07Rik; PLCzeta; MGC123405; MGC123406
Mus musculus	RefSeq	ILMN_217664	ILMN_217664	PLCZ1	NM_054066.4	NM_054066.4		114875	146149119	NM_054066.4	Plcz1	NP_473407.2	ILMN_2686104	007000731	S	2118	GTACTTCAGAGAGTGACGCATGTAACTGACGCGTTAGCTACACATCACAG				6qG2	Mus musculus phospholipase C, zeta 1 (Plcz1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whereby the egg becomes metabolically active, initiates protein and DNA synthesis and undergoes structural changes to its cortex and/or cytoplasm [goid 7343] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IDA]	1700041H07Rik; PLCzeta; MGC123405; MGC123406	1700041H07Rik; PLCzeta; MGC123405; MGC123406
Mus musculus	RefSeq	ILMN_186559	ILMN_186559	TMEM19	NM_133683.3	NM_133683.3		67226	146149193	NM_133683.3	Tmem19	NP_598444.1	ILMN_2436561	005690095	S	2736	GTTGACCTGGGAGTATATTCTGGGGGAAGCGCTTAAAGATGCCAGGTGGC				10qD2	Mus musculus transmembrane protein 19 (Tmem19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2810428F02Rik; AW125171	2810428F02Rik; AW125171
Mus musculus	RefSeq	ILMN_196367	ILMN_196367	RPAP2	NM_144911.1	NM_144911.1		231571	21450300	NM_144911.1	Rpap2	NP_659160.1	ILMN_2609494	004390577	S	2114	ATGGATATTGGGGAAAATGTAATTACCTTTATTCTTTTTGATTGGTTACC	5	+	108090703-108090752	5qE5	Mus musculus RNA polymerase II associated protein 2 (Rpap2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW060207; MGC27814	AW060207; MGC27814
Mus musculus	RefSeq	ILMN_196367	ILMN_196367	RPAP2	NM_144911.1	NM_144911.1		231571	21450300	NM_144911.1	Rpap2	NP_659160.1	ILMN_2977212	001030520	S	1888	CCAGCTGCTAGCTAACAAGAATGATGTAACTGAGGAAGACAGAAGAGGAA	5	+	108084307-108084317:108084318-108084329:108090500-108090526	5qE5	Mus musculus RNA polymerase II associated protein 2 (Rpap2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW060207; MGC27814	AW060207; MGC27814
Mus musculus	RefSeq	ILMN_196367	ILMN_196367	RPAP2	NM_144911.1	NM_144911.1		231571	21450300	NM_144911.1	Rpap2	NP_659160.1	ILMN_2652260	003450538	S	1964	GCCAGTGAGAGTCCATGGGTGACTGATGACTAAGTGTGTAACTTCCTCAG	5	+	108090553-108090602	5qE5	Mus musculus RNA polymerase II associated protein 2 (Rpap2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW060207; MGC27814	AW060207; MGC27814
Mus musculus	RefSeq	ILMN_196367	ILMN_196367	RPAP2	NM_144911.1	NM_144911.1		231571	21450300	NM_144911.1	Rpap2	NP_659160.1	ILMN_2977210	002140070	S	1950	GGCCTGGTGTTTTCGCCAGTGAGAGTCCATGGGTGACTGATGACTAAGTG	5	+	108090539-108090588	5qE5	Mus musculus RNA polymerase II associated protein 2 (Rpap2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW060207; MGC27814	AW060207; MGC27814
Mus musculus	RefSeq	ILMN_209709	ILMN_209709	PRKCC	NM_011102.3	NM_011102.3		18752	126215539	NM_011102.3	Prkcc	NP_035232.1	ILMN_2598430	002480112	S	2100	CCGTTGGATCGATTGGGAGAGGTTGGAGAGACTGGAAATTGCACCTCCTT	7	+	3330225-3330274	7qA1	Mus musculus protein kinase C, gamma (Prkcc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Behavior that is dependent upon the sensation of chemicals [goid 7635] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	Pkcc; MGC130440; PKCgamma	Pkcc; MGC130440; PKCgamma
Mus musculus	RefSeq	ILMN_223165	ILMN_223165	ECT2	NM_007900.2	NM_007900.2		13605	118131143	NM_007900.2	Ect2	NP_031926.1	ILMN_2760144	000540372	S	3640	GAATCTGCCATTATCTTCTACTGCAATATTTCTTTTAGTCAGTAATACAG	3	-	26996379-26996428	3qA3	Mus musculus ect2 oncogene (Ect2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA4037; KIAA4037; AI528536	mKIAA4037; KIAA4037; AI528536
Mus musculus	RefSeq	ILMN_217460	ILMN_317028	MUG4	XR_035729.1	XR_035729.1		434083	149255747	XR_035729.1	Mug4		ILMN_2774563	005870010	S	3483	AGACATCCCAGTAAGGAACCTGCAGCCTGCCATTGTGAAAGTCTATGACT				6qF1	PREDICTED: Mus musculus murinoglobulin 4 (Mug4), misc RNA.					
Mus musculus	RefSeq	ILMN_216477	ILMN_216477	RPS15	NM_009091.1	NM_009091.1		20054	6677798	NM_009091.1	Rps15	NP_033117.1	ILMN_2671517	005570129	S	223	AAGGAGGCACCACCCATGGAGAAGCCTGAGGTGGTGAAGACTCACCTGAG	10	+	79756496-79756545	10qC1	Mus musculus ribosomal protein S15 (Rps15), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	rig	rig
Mus musculus	RefSeq	ILMN_236305	ILMN_236305	ADAM22	NM_001007220.2	NM_001007220.2		11496	56790898	NM_001007220.2	Adam22	NP_001007221.1	ILMN_3057562	006020170	I	2452	GCCTGGCGATGGCGACTCTTTTTATAGCGACTTTCCTCCCGGAGGCAGCA	5	-	8095100-8095149	5qA1	Mus musculus a disintegrin and metallopeptidase domain 22 (Adam22), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	MDC2; AI854032; 2900022I03Rik	MDC2; AI854032; 2900022I03Rik
Mus musculus	RefSeq	ILMN_223102	ILMN_236305	ADAM22	NM_001007220.2	NM_001007220.2		11496	56790898	NM_001007220.2	Adam22	NP_001007221.1	ILMN_2759398	006130273	S	2579	CATATTTCAGACATCTGTGAAAATGGGAGACCTCGCAGTAACTCCTGGCA	5	-	8092732-8092781	5qA1	Mus musculus a disintegrin and metallopeptidase domain 22 (Adam22), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	MDC2; AI854032; 2900022I03Rik	MDC2; AI854032; 2900022I03Rik
Mus musculus	RefSeq	ILMN_236305	ILMN_236305	ADAM22	NM_001007220.2	NM_001007220.2		11496	56790898	NM_001007220.2	Adam22	NP_001007221.1	ILMN_3134632	002690544	A	2350	CGGCACCATTTTAGTGCTGGCCCTCATCTTAGGAATAACTGCCTGGGGTT	5	-	8111898-8111947	5qA1	Mus musculus a disintegrin and metallopeptidase domain 22 (Adam22), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	MDC2; AI854032; 2900022I03Rik	MDC2; AI854032; 2900022I03Rik
Mus musculus	RefSeq	ILMN_212611	ILMN_212611	SP4	NM_009239.2	NM_009239.2		20688	70887785	NM_009239.2	Sp4	NP_033265.2	ILMN_1259753	002600379	S	2330	GGAGGTGGGACAGCTCTTGCCATTGTTACCTCCGGAGAACTGGACTCATC	12	-	119476725-119476774	12qF2	Mus musculus trans-acting transcription factor 4 (Sp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	HF1-b; HF-1b; 5730497N03Rik	HF1-b; HF-1b; 5730497N03Rik
Mus musculus	RefSeq	ILMN_188161	ILMN_212611	SP4	NM_009239.2	NM_009239.2		20688	70887785	NM_009239.2	Sp4	NP_033265.2	ILMN_1253376	001300746	S	5465	CCCATATTCTAGAATTTAGACAATTATTCTGCCAGCAAAGCCTCTGGGGC	12	-	119473590-119473639	12qF2	Mus musculus trans-acting transcription factor 4 (Sp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	HF1-b; HF-1b; 5730497N03Rik	HF1-b; HF-1b; 5730497N03Rik
Mus musculus	RefSeq	ILMN_252778	ILMN_252778	MRPS18B	NM_025878.1	NM_025878.1		66973	23956151	NM_025878.1	Mrps18b	NP_080154.1	ILMN_2865239	002140634	S	797	CAAGGGAGTACTGTCTAGGGCTACGTGGTATCCTGTGTCCTGCAAAGGGT	17	-	36047536-36047585	17qB1	Mus musculus mitochondrial ribosomal protein S18B (Mrps18b), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	2400002C15Rik	2400002C15Rik
Mus musculus	RefSeq	ILMN_187332	ILMN_252778	MRPS18B	NM_025878.1	NM_025878.1		66973	23956151	NM_025878.1	Mrps18b	NP_080154.1	ILMN_2677047	002070255	S	135	GCTTCCCGTTTCCCCATATGAGAGCGAGCCTTGGAAGTACCTGGATTCAG	17	-	36051643-36051692	17qB1	Mus musculus mitochondrial ribosomal protein S18B (Mrps18b), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	2400002C15Rik	2400002C15Rik
Mus musculus	Riken	ILMN_204756	ILMN_204756	B930054A18RIK	ri|B930054A18|PX00164H15|AK047378|2432					AK047378	B930054A18Rik		ILMN_2567380	002970482	S	1876	CAGTCTCAGGGCAAAAAGGATAAGGCCTTGCCTCCTGGATACATCCACGG										
Mus musculus	RefSeq	ILMN_214616	ILMN_260405	SFRS5	NM_001079694.1	NM_001079694.1		20384	119226242	NM_001079694.1	Sfrs5	NP_001073162.1	ILMN_2772274	002060435	S	406	GGGCTCGGTCTCGAGGTGGAAGAGGTAGAGGACGATACTCCGACCGTTTT	12	+	82048503-82048552	12qD1	Mus musculus splicing factor, arginine/serine-rich 5 (SRp40, HRS) (Sfrs5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]	MGC96781	MGC96781
Mus musculus	Riken	ILMN_205370	ILMN_205370	D130007C19RIK	ri|D130007C19|PX00182M12|AK051152|1514					AK051152	D130007C19Rik		ILMN_1238543	001260470	S	1392	CACTCACACACACAACGTGCACTCTCCTTACACTCACACACACTCGTCAC										
Mus musculus	MEEBO	ILMN_184352	ILMN_184352	KCNS2	scl47997.3_605				6680549	NM_008436	Kcns2		ILMN_1218874	000450685	S	2225	GCACACTTGAACAATGCAATCTCGAGTTGTCTTCTACTTGGCCCGTCCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184352	ILMN_184352	KCNS2	scl47997.3_605				6680549	NM_008436	Kcns2		ILMN_2417936	006590687	S	20	GTTTTAACACTCATTAACACACTACTGTGCCAGCGTCCTGGCGGCTCCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	Riken	ILMN_203726	ILMN_203726	9830134N18RIK	ri|9830134N18|PX00118A14|AK036570|3134					AK036570	9830134N18Rik		ILMN_2559507	003120070	S	2971	GCTTTGGGTACCAAAGGTGATGGACCAAGGAGCCCTTGATGTTCAGGCTG										
Mus musculus	Riken	ILMN_206178	ILMN_206178	E330008M07RIK	ri|E330008M07|PX00211F08|AK087698|1490					AK087698	E330008M07Rik		ILMN_2578165	005260048	S	1346	CACCAGAGAACTCCTAAACCTGATAAACAGCTTCAATGAAGTAGCTGTAC										
Mus musculus	MEEBO	ILMN_193570	ILMN_193570	LHX1	scl39807.6_296				6678687	NM_008498	Lhx1		ILMN_1225672	003060328	S	1	GACAGATTTGCAGGGCTTGCGGCTCACTGTGCTAGTATGTAAAAAGGTGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IGI]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IGI]; The process that mediates the transfer of information from Purkinje cells to granule cell precursors resulting in an increase in rate of granule cell precursor cell proliferation [goid 21937] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IGI]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The formation of ectoderm during gastrulation [goid 1705] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The formation of the endoderm during gastrulation [goid 1706] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193570	ILMN_193570	LHX1	scl39807.6_296				6678687	NM_008498	Lhx1		ILMN_2716543	007400168	S	2501	TCTGTCGGTCAATGGTGGAGCCAGCTACGGGAACCATTTGTCTCACCCTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IGI]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IGI]; The process that mediates the transfer of information from Purkinje cells to granule cell precursors resulting in an increase in rate of granule cell precursor cell proliferation [goid 21937] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IGI]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The formation of ectoderm during gastrulation [goid 1705] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The formation of the endoderm during gastrulation [goid 1706] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	Riken	ILMN_202819	ILMN_202819	9130204C11RIK	ri|9130204C11|PX00061D15|AK033633|2103					AK033633	9130204C11Rik		ILMN_1246622	004850767	S	1939	GGTGTCTGACTTGGGGAAGTATGGCCACCTTTGTCCTCTCTACGCGGGTC										
Mus musculus	Riken	ILMN_204056	ILMN_204056	IMMT	ri|A130064N22|PX00124I08|AK037930|3054					AK037930	Immt		ILMN_1251188	001240403	S	2550	GCCTGGAACTTGCTGTAGACCAGACTGGCTTGGAACTCTCTTGCCTCTGC						The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_261707	ILMN_261707	SNX13	NM_001014973.1	NM_001014973.1		217463	62510082	NM_001014973.1	Snx13	NP_001014973.1	ILMN_2877227	007560435	S	3712	GATTCTCTTTGGTGATGTGCTGTATGGGCTCGGCCTTGCTCTTAGGGCCC	12	+	35829663-35829712	12qA3	Mus musculus sorting nexin 13 (Snx13), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RGS-PX1; mKIAA0713	RGS-PX1; mKIAA0713
Mus musculus	RefSeq	ILMN_188244	ILMN_261707	SNX13	NM_001014973.1	NM_001014973.1		217463	62510082	NM_001014973.1	Snx13	NP_001014973.1	ILMN_1240380	005890437	S	2634	AGTTGACCATGTTGACTGGATGACCTCACCGGAACAAGTAGCTGACTCGG	12	+	35823078-35823127	12qA3	Mus musculus sorting nexin 13 (Snx13), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RGS-PX1; mKIAA0713	RGS-PX1; mKIAA0713
Mus musculus	Riken	ILMN_204906	ILMN_204906	C130050F24RIK	ri|C130050F24|PX00170C17|AK048341|3785					AK048341	C130050F24Rik		ILMN_1248596	000160300	S	3361	CTAGGACCCTCATAGCCAAAGGCTCCCTGATTCATTCATAGGAAACCAGG										
Mus musculus	MEEBO	ILMN_210768	ILMN_210768	C730014E05RIK	scl0319990.1_110	NM_177051.2			31342687	NM_177051.2	C730014E05Rik		ILMN_2608967	001300086	S	2874	GCCATGCCTCTGATTATTGCTTGCTGTCTGTGCTAAAGTTAATGGAAGAA										
Mus musculus	RefSeq	ILMN_215038	ILMN_215038	RNF43	NM_172448.1	NM_172448.1		207742	27369606	NM_172448.1	Rnf43	NP_766036.1	ILMN_2979097	000580008	S	3475	TGCCTGCAATGTGAAGGTGGGGGCAAAATGGACATGGGATCCTCCTTGGG	11	+	87551539-87551588	11qC	Mus musculus ring finger protein 43 (Rnf43), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-449P23.1; 4732452J19Rik	RP23-449P23.1; 4732452J19Rik
Mus musculus	RefSeq	ILMN_201257	ILMN_201257	LOC384990	XM_357974.1	XM_357974.1			38090192	XM_357974.1	LOC384990		ILMN_1218114	002750131	S	156	GGACTGGATGATAGACACCAGAGAGAAGCCCTACGTCTGCAAGGAGAGCC										
Mus musculus	RefSeq	ILMN_219701	ILMN_326371	9030411M15RIK	XM_001478778.1	XM_001478778.1		667742	149269799	XM_001478778.1	9030411M15Rik	XP_001478828.1	ILMN_2743053	005260110	S	1859	GCAGTACATATGGAGCTTCGAGCTCCCCGAGATTAAGAAGGTCCCCGGGT	18	-	63273569-63273618	18qE1	PREDICTED: Mus musculus RIKEN cDNA 9030411M15 gene (9030411M15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_219701	ILMN_326371	9030411M15RIK	XM_001478778.1	XM_001478778.1		667742	149269799	XM_001478778.1	9030411M15Rik	XP_001478828.1	ILMN_1240597	003850743	S	1993	CAGAGCAGAAGGCCCTGAGGGAAAAGGAAGCACTTCTTTCTGAAGTCAAA	18	-	63269546-63269595	18qE1	PREDICTED: Mus musculus RIKEN cDNA 9030411M15 gene (9030411M15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211793	ILMN_321726	LOC100038993	NM_001100596.1	NM_001100596.1		100038993	154689651	NM_001100596.1	LOC100038993	NP_001094066.1	ILMN_2703712	000770717	S	777	AGAGGGAAAGTCCATCCACCGGGCCTTGGCCGTGTCCACAGGACCCTCTG				4qA5	Mus musculus similar to interleukin 11 receptor, alpha chain 2 (LOC100038993), mRNA.					
Mus musculus	RefSeq	ILMN_213279	ILMN_321726	LOC100038993	NM_001100596.1	NM_001100596.1		100038993	154689651	NM_001100596.1	LOC100038993	NP_001094066.1	ILMN_1248616	005720292	S	801	CTTGGCCGTGTCCACAGGACCCTCTGGAGGCCTCCCGATGTGTGGTCCAT				4qA5	Mus musculus similar to interleukin 11 receptor, alpha chain 2 (LOC100038993), mRNA.					
Mus musculus	MEEBO	ILMN_195191	ILMN_195191	6430537F04	scl24334.3_574						6430537F04		ILMN_2513378	002120309	S	15	CTGTGAAGAGTATTTGCCCTGCGTCTTCATTTCCGTGTGTGTGCAACTGC										
Mus musculus	RefSeq	ILMN_223246	ILMN_223246	CLCA2	NM_030601.2	NM_030601.2		80797	34328332	NM_030601.2	Clca2	NP_085104.1	ILMN_2761361	005290717	S	2971	AGTGTGATGCAGGTTCACTTTACAAAATATTACCAAAATAAAATTTGTAT	3	-	144460139-144460188	3qH2	Mus musculus chloride channel calcium activated 2 (Clca2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence ISA]	Catalysis of the transmembrane transfer of chloride by a channel that opens in response to stimulus by a calcium ion or ions. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 5229] [evidence ISA]		
Mus musculus	RefSeq	ILMN_257493	ILMN_257493	PDZK1	NM_021517.1	NM_021517.1		59020	10946937	NM_021517.1	Pdzk1	NP_067492.1	ILMN_2924754	000610176	S	1835	CTTCTGCAGCTTGAGCACCTGGGATGATTCACTGTCCATGTGAGTGCTGC	3	+	96674328-96674377	3qF2.1	Mus musculus PDZ domain containing 1 (Pdzk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI314638; 1700023D20Rik; Pdzd1; AL022680; D3Ertd537e; AI267131; 2610507N21Rik; mPDZK1; 4921513F16Rik	AI314638; 1700023D20Rik; Pdzd1; AL022680; D3Ertd537e; AI267131; 2610507N21Rik; mPDZK1; 4921513F16Rik
Mus musculus	RefSeq	ILMN_211060	ILMN_261786	FBXL11	NM_001001984.2	NM_001001984.2		225876	100818177	NM_001001984.2	Fbxl11	NP_001001984.2	ILMN_1224664	002900521	S	5331	GCTCACTGACCTGGTGCCTTTTAAGGGGAGTCCTGATTGAAAACCTACCC	19	-	4318031-4318080	19qA	Mus musculus F-box and leucine-rich repeat protein 11 (Fbxl11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]	Fbl11; Cxxc8; lalina; Jhdm1; Fbl7	Fbl11; Cxxc8; lalina; Jhdm1; Fbl7
Mus musculus	RefSeq	ILMN_232397	ILMN_232397	RIC3	NM_001038624.1	NM_001038624.1		320360	84490395	NM_001038624.1	Ric3	NP_001033713.1	ILMN_3150819	000830161	A	650	CACATCTCCAGAGAAGGAAGCTGAGGAAGCCCCATACATGGAGGACTGGG	7	-	116196375-116196424	7qE3	Mus musculus resistance to inhibitors of cholinesterase 3 homolog (C. elegans) (Ric3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			E130307J04Rik	E130307J04Rik
Mus musculus	RefSeq	ILMN_232397	ILMN_232397	RIC3	NM_001038624.1	NM_001038624.1		320360	84490395	NM_001038624.1	Ric3	NP_001033713.1	ILMN_3072117	005810114	I	4967	GCAGTGCTGATCTGTATGCCACTCACTGGTTCTAAACGTGCTCTGGGCCC	7	-	116178625-116178674	7qE3	Mus musculus resistance to inhibitors of cholinesterase 3 homolog (C. elegans) (Ric3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			E130307J04Rik	E130307J04Rik
Mus musculus	MEEBO	ILMN_192842	ILMN_192842	D11BWG0414E	scl076437.1_89						D11Bwg0414e		ILMN_2491831	005870671	S	4	CAGAGTCCAGACGGGCTGGTGATCTCACTGCCTGTAGGTTGAAGCTCAGA										
Mus musculus	RefSeq	ILMN_197707	ILMN_197707	LOC380992	XM_358482.1	XM_358482.1			38077485	XM_358482.1	LOC380992		ILMN_2529082	004640068	S	413	GGCTGGGAGAGGGACAGGGAAGAAAAACCCAAGAAGATCCCACAGCACTG										
Mus musculus	RefSeq	ILMN_222544	ILMN_222544	TOR1AIP1	NM_144791.1	NM_144791.1		208263	21450140	NM_144791.1	Tor1aip1	NP_659040.1	ILMN_2751215	001010386	S	1479	TAAAGTCAAGTTCACCAGCTCTAGCACTGCCAGCTCCTACAACCACATGG	1	-	157854149-157854198	1qG3	Mus musculus torsin A interacting protein 1 (Tor1aip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]		Interacting selectively with lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope [goid 5521] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC6357; LAP1; Lap1B	MGC6357; LAP1; Lap1B
Mus musculus	RefSeq	ILMN_205149	ILMN_222544	TOR1AIP1	NM_144791.1	NM_144791.1		208263	21450140	NM_144791.1	Tor1aip1	NP_659040.1	ILMN_1246038	004040424	S	460	AGTGCTGCTCAAGGCGAGCAGACCTCCGCGTCTTCATCTCCTCGGCTTCC	1	-	157882916-157882965	1qG3	Mus musculus torsin A interacting protein 1 (Tor1aip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]		Interacting selectively with lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope [goid 5521] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC6357; LAP1; Lap1B	MGC6357; LAP1; Lap1B
Mus musculus	RefSeq	ILMN_196641	ILMN_256511	LARP4	NM_001080948.1	NM_001080948.1		207214	124358931	NM_001080948.1	Larp4	NP_001074417.1	ILMN_1244828	003850341	S	5330	CTGAATACTCACTCTCAGTTTTGCCAAAGACTCAGTGGCGTTTAAAAGCG	15	+	99845585-99845634	15qF1	Mus musculus La ribonucleoprotein domain family, member 4 (Larp4), transcript variant 2, mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	DXErtd793; DXErtd793e; C530046N12; D330037H05Rik	DXErtd793; DXErtd793e; C530046N12; D330037H05Rik
Mus musculus	RefSeq	ILMN_201505	ILMN_201505	LOC385272	XM_358162.1	XM_358162.1			38095413	XM_358162.1	LOC385272		ILMN_2542539	003420296	S	219	CTCGGAGCAGAAGTTTCAGCAATATAGAGAAGAAGTTAGCTGGGATCTTC										
Mus musculus	RefSeq	ILMN_186924	ILMN_316237	LOC100047834	XM_001478963.1	XM_001478963.1		100047834	149259340	XM_001478963.1	LOC100047834	XP_001479013.1	ILMN_1227463	004540767	S	1773	CCTGGTGGTGATGAGGCTTCGCCTTCCTGTAGTAAGATGGACTCCTGAGC					PREDICTED: Mus musculus similar to translin associated protein X (LOC100047834), mRNA.					
Mus musculus	MEEBO	ILMN_186207	ILMN_186207	0610038B21RIK	scl070345.3_145						0610038B21Rik		ILMN_1246762	003130332	S	7	CATTTTATCTGTGTACCGAAGGAAGGGTGCTTCGCTGTGCAAGGGCTCGC										
Mus musculus	MEEBO	ILMN_216872	ILMN_216872	SFRS2IP	scl0072193.1_269	XM_128178.5			38077135	XM_128178.5	Sfrs2ip		ILMN_2713448	005420110	S	4526	TGGCCAATCTGGTTAAGGCGTACGTAGACAAGTACAGATACTCGCGGAAG								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223300	ILMN_223300	NKX2-3	scl0018089.2_54	NM_008699.1			46849701	NM_008699.1	Nkx2-3		ILMN_1228029	001340593	S	1164	CCCAAGGGCCAGGTCCCCTCGTTAAAATAAAAATACAGACGTATCGCTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process, occurring during the post-embryonic phase, by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48621] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48565] [evidence IMP]; The process whose specific outcome is the progression of mucosal- associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48537] [evidence IMP]; The process whereby a B cell acquires the specialized features of a plasma cell. A plasma cell is a lymphocyte which develops from a B cell and produces high amounts of antibody [goid 2317] [evidence IMP]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell [goid 43367] [evidence IMP]; The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1776] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]; The process by which the anatomical structures of a gland are generated and organized. Morphogenesis pertains to the creation of form [goid 22612] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48541] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IMP]; The process by which the anatomical structures of a follicular epithelium are generated and organized. Morphogenesis pertains to the creation of form [goid 16333] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_190738	ILMN_312176	LOC100044025	XM_001478217.1	XM_001478217.1		100044025	149266204	XM_001478217.1	LOC100044025	XP_001478267.1	ILMN_2472831	007510167	S	161	CCTTTTTCTGGTATGTGCAATATCTCAACGAAGCCCCTCAGGTACTCCTG	14	+	53468745-53468794		PREDICTED: Mus musculus similar to OTTMUSG00000015204 protein (LOC100044025), mRNA.					
Mus musculus	RefSeq	ILMN_187120	ILMN_225634	ZFP260	NM_011981.4	NM_011981.4		26466	55741879	NM_011981.4	Zfp260	NP_036111.2	ILMN_1247633	002060735	S	3461	CGTGTGTGCATCCCAAGGCCCCTCATGGATATCTGAAGCCTTGTGTAGTA	7	+	30892378-30892427	7qB1	Mus musculus zinc finger protein 260 (Zfp260), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI480997; PEX1; Zfp63; Ozrf1	AI480997; PEX1; Zfp63; Ozrf1
Mus musculus	Riken	ILMN_207179	ILMN_207179	ITGA4	ri|F830048A08|PL00007J03|AK089898|2944					AK089898	Itga4		ILMN_1233594	002900528	S	2869	CTGGTTCACTGTGCCTTCTGAGAGCACTAACAGGCCATTTCCCCATCTCC						The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence IMP]		
Mus musculus	MEEBO	ILMN_221650	ILMN_221650	OLFR726	scl45623.2.110_319				22129662	NM_146316	Olfr726		ILMN_2738413	001070730	S	887	AGCTATGTCAAAGCTGAGGGGTCGCTATCTGAAGCCTGGACAAGTTTCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	MEEBO	ILMN_190893	ILMN_190893	1110032D16RIK	scl401.1.1_296						1110032D16Rik		ILMN_2474195	001300326	S	9	ATGGCACTGATATGTAGGGAAAATTATAATTTTACTTTTCAATAAAATGA										
Mus musculus	RefSeq	ILMN_196996	ILMN_246160	ATP2B4	NM_213616.1	NM_213616.1		381290	54261792	NM_213616.1	Atp2b4	NP_998781.1	ILMN_1217742	004390382	S	3466	TTGGTTTCTAAGGCGGGGACGAGTGTGCTCCTGTTGGATGGTGAAGCTGC	1	-	135603370-135603419	1qE4	Mus musculus ATPase, Ca++ transporting, plasma membrane 4 (Atp2b4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]	PMCA4; MGC129362; MGC129363	PMCA4; MGC129362; MGC129363
Mus musculus	RefSeq	ILMN_246160	ILMN_246160	ATP2B4	NM_213616.1	NM_213616.1		381290	54261792	NM_213616.1	Atp2b4	NP_998781.1	ILMN_3159185	001570674	A	3203	AGGACATCAGCAGGGATACTGAGGGAATGGACGAGATTGACCTTGCCGAG	1	-	135611690-135611739	1qE4	Mus musculus ATPase, Ca++ transporting, plasma membrane 4 (Atp2b4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]	PMCA4; MGC129362; MGC129363	PMCA4; MGC129362; MGC129363
Mus musculus	RefSeq	ILMN_246160	ILMN_246160	ATP2B4	NM_213616.1	NM_213616.1		381290	54261792	NM_213616.1	Atp2b4	NP_998781.1	ILMN_3079877	002340603	I	3553	CACCAAGTGCAAATCGTTGCCTCCCATTCTGACAGCCCTCTGCCAAGCCT	1	-	135603283-135603332	1qE4	Mus musculus ATPase, Ca++ transporting, plasma membrane 4 (Atp2b4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]	PMCA4; MGC129362; MGC129363	PMCA4; MGC129362; MGC129363
Mus musculus	RefSeq	ILMN_218583	ILMN_218583	2510048L02RIK	NM_025977.1	NM_025977.1		67119	13385475	NM_025977.1	2510048L02Rik	NP_080253.1	ILMN_2815374	005260044	S	1241	GGATGACCTCCAGAAGGAGCTGGGTGACATATGGTCTGCCGTTCACAGTC	9	+	21684604-21684635:21684837-21684854	9qA3	Mus musculus RIKEN cDNA 2510048L02 gene (2510048L02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196972	ILMN_196972	LOC328136	XM_286430.2	XM_286430.2			38050493	XM_286430.2	LOC328136		ILMN_1224682	003310349	S	443	CTGAGGAGGGCCAGAGGGTGACGCCACAGCATCCAACTTGCAAAGCTAGA										
Mus musculus	RefSeq	ILMN_199634	ILMN_199634	LOC382813	XM_358730.1	XM_358730.1			38075404	XM_358730.1	LOC382813		ILMN_1237743	002970711	S	421	ATGGACACAGTGGGTGTGGAAGCAGTGGCTGTGGATGCAGTGACCAGGGA										
Mus musculus	RefSeq	ILMN_185585	ILMN_185585	TREX2	NM_011907.3	NM_011907.3		24102	47458830	NM_011907.3	Trex2	NP_036037.1	ILMN_1225473	004060204	S	428	CGATTATGACTTCCCACTGCTGTGCACGGAGCTACAACGTCTGGGTGCCC	X	-	70679672-70679721	XqA7.3	Mus musculus three prime repair exonuclease 2 (Trex2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]	MGC129477; MGC129476	MGC129477; MGC129476
Mus musculus	RefSeq	ILMN_217185	ILMN_217185	PRL6A1	NM_011166.1	NM_011166.1		19111	6755167	NM_011166.1	Prl6a1	NP_035296.1	ILMN_2680026	004590131	S	470	TCAAGAGCCAGAAATATTGAAGAAAAAATCATAGTACTTATAGAAGCTCT	13	+	27409953-27410002	13qA3.1	Mus musculus prolactin family 6, subfamily a, member 1 (Prl6a1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Prlpb; PLP-B	Prlpb; PLP-B
Mus musculus	RefSeq	ILMN_231014	ILMN_231014	EG380907	NM_001004158.1	NM_001004158.1		380907	51921318	NM_001004158.1	EG380907	NP_001004158.1	ILMN_2960992	003420594	S	428	AGGAACCTGAAATGCTAAGACTACAAGATTCTCAAGTAACTCCAAGACCC	14	-	58112761-58112794:58112795-58112810	14qC3	Mus musculus predicted gene, EG380907 (EG380907), mRNA.					
Mus musculus	RefSeq	ILMN_223392	ILMN_223392	NTAN1	NM_010946.3	NM_010946.3		18203	87299633	NM_010946.3	Ntan1	NP_035076.1	ILMN_2888742	000050400	S	653	GCTTCCTTTCAAGATCGTGGTCCAGAGGAGCAACTGCGTGCTGCAAGAGC	16	+	13832462-13832511	16qA1	Mus musculus N-terminal Asn amidase (Ntan1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA];  [goid 8418] [evidence IDA]		
Mus musculus	MEEBO	ILMN_187273	ILMN_187273	GA17	scl18911.7_20				21703761	NM_145380	Ga17		ILMN_1244685	004180142	S	1	CAGAGCACACCCTCAGTGAAATAGTACTGACCTGTTTTAACCAGAATTTG										
Mus musculus	RefSeq	ILMN_212343	ILMN_317121	LOC100044576	XM_001472856.1	XM_001472856.1		100044576	149256748	XM_001472856.1	LOC100044576	XP_001472906.1	ILMN_2625342	003120180	S	313	TCTTAGACAGACTCCCAGTGGGTCCCCAGTATGGGGGCAGGAACTTCAGG					PREDICTED: Mus musculus hypothetical protein LOC100044576 (LOC100044576), mRNA.					
Mus musculus	RefSeq	ILMN_214932	ILMN_214932	TNFAIP8L2	NM_027206.2	NM_027206.2		69769	141802951	NM_027206.2	Tnfaip8l2	NP_081482.1	ILMN_1249688	000650408	S	378	CAGGGCGCCATGACCGCACTTAGCTTCGGTGAGGTGGACTTCACCTTTGA	3	-	94944137-94944186	3qF2.1	Mus musculus tumor necrosis factor, alpha-induced protein 8-like 2 (Tnfaip8l2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW610835; 1810019A08Rik	AW610835; 1810019A08Rik
Mus musculus	RefSeq	ILMN_212073	ILMN_212073	BC061039	NM_026624.1	NM_026624.1		68222	21311858	NM_026624.1	BC061039	NP_080900.1	ILMN_1234184	006280086	S	957	CGGTAACAGCACCCGAAGAGCCTATCAGAAGGAATTGGACAGGCGAAGCC	2	+	25044121-25044170	2qA3	Mus musculus cDNA sequence BC061039 (BC061039), mRNA.				4931415M17	4931415M17
Mus musculus	RefSeq	ILMN_199262	ILMN_199262	LOC211980	XM_145562.3	XM_145562.3			38093534	XM_145562.3	LOC211980		ILMN_2534616	004900095	S	60	GTCACTGGCCTTAGTGTCTTTGATGCTTCATTTCAGCTGGTCCTGGGTGG										
Mus musculus	MEEBO	ILMN_187857	ILMN_187857	HRB2	scl38441.9_79				31340821	NM_178610	Hrb2		ILMN_1247867	005420064	S	1	AGCTTAACTCCCCTGTTCTGAGAGCCCTGGAGTCATGGGTTAGAACATGT										
Mus musculus	RefSeq	ILMN_215627	ILMN_215627	IMP4	NM_178601.2	NM_178601.2		27993	31340630	NM_178601.2	Imp4	NP_848716.1	ILMN_2724643	007560113	S	625	GGACATCCTTCGTTACCTATTCCCCGTGCCAAAAGACGACAGCCATCGGG	1	+	34500847-34500896	1qB	Mus musculus IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (Imp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]; Interacting selectively with a protein constituent of a small nucleolar ribonucleoprotein particle [goid 30519] [evidence ISA]	AA409888; D1Wsu40e; AV031295	AA409888; D1Wsu40e; AV031295
Mus musculus	RefSeq	ILMN_215627	ILMN_215627	IMP4	NM_178601.2	NM_178601.2		27993	31340630	NM_178601.2	Imp4	NP_848716.1	ILMN_1227519	003400482	S	1193	GGGCCCTGTGAACACTTTTTTCCTGTGGTTTAGGGTCAGTCTTTGTCACC	1	+	34501607-34501656	1qB	Mus musculus IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (Imp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]; Interacting selectively with a protein constituent of a small nucleolar ribonucleoprotein particle [goid 30519] [evidence ISA]	AA409888; D1Wsu40e; AV031295	AA409888; D1Wsu40e; AV031295
Mus musculus	RefSeq	ILMN_185910	ILMN_185910	UBAC1	NM_133835.1	NM_133835.1		98766	19527049	NM_133835.1	Ubac1	NP_598596.1	ILMN_1241976	000380564	S	1721	GGCATGTTCTGATCCAAAGTGTTATGTCAAGTGTGCTAATTTAACCAGAC	2	-	25854108-25854157	2qA3	Mus musculus ubiquitin associated domain containing 1 (Ubac1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		Ubadc1; GBDR1; AA407978; Gdbr1; 1110033G07Rik	Ubadc1; GBDR1; AA407978; Gdbr1; 1110033G07Rik
Mus musculus	RefSeq	ILMN_185910	ILMN_185910	UBAC1	NM_133835.1	NM_133835.1		98766	19527049	NM_133835.1	Ubac1	NP_598596.1	ILMN_2911760	002850079	S	1649	GCTGGGCTCCTGAAGTGCTACTTGAATTGACCCTTAGGTGTTTGCTTGTG	2	-	25854180-25854229	2qA3	Mus musculus ubiquitin associated domain containing 1 (Ubac1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		Ubadc1; GBDR1; AA407978; Gdbr1; 1110033G07Rik	Ubadc1; GBDR1; AA407978; Gdbr1; 1110033G07Rik
Mus musculus	RefSeq	ILMN_185910	ILMN_185910	UBAC1	NM_133835.1	NM_133835.1		98766	19527049	NM_133835.1	Ubac1	NP_598596.1	ILMN_2431046	000630524	S	1216	AATAGCCCTCTCTTTCAGGCCATCCTGGACAACCCAGTGGTGCAGCTGGG	2	-	25860871-25860920	2qA3	Mus musculus ubiquitin associated domain containing 1 (Ubac1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		Ubadc1; GBDR1; AA407978; Gdbr1; 1110033G07Rik	Ubadc1; GBDR1; AA407978; Gdbr1; 1110033G07Rik
Mus musculus	RefSeq	ILMN_218612	ILMN_218612	MLH1	NM_026810.1	NM_026810.1		17350	19387851	NM_026810.1	Mlh1	NP_081086.1	ILMN_2987615	003850615	S	1847	GGACGACGGCCCGAAGGAAGGGCTTGCAGAGTACATTGTCGAGTTTCTGA	9	-	111133454-111133503	9qF3	Mus musculus mutL homolog 1 (E. coli) (Mlh1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IDA]; A connection formed between chromatids, visible during meiosis, thought to be the point of the interchange involved in crossing-over [goid 5712] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence ISS]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IMP]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MLH1 and PMS2 [goid 32389] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The cell cycle process whereby genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a male [goid 7060] [evidence IMP]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IGI]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IMP]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle [goid 45132] [evidence IMP]; The cleavage and rejoining of Holliday junctions formed during meiotic recombination to produce two intact molecules in which genetic material has been exchanged [goid 712] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IMP]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IDA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; Any process that inhibits or decreases the rate of DNA recombination during mitosis [goid 45950] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence ISO]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; Shortening of the poly(A) tail of a nuclear-transcribed mRNA from full length to an oligo(A) length [goid 289] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IMP]; The alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the meiotic spindle, during meiosis I [goid 43060] [evidence IMP]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence IMP]; The cleavage and rejoining of Holliday junctions formed during meiotic recombination to produce two intact molecules in which genetic material has been exchanged [goid 712] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, also known as immunoglobulin gene segments, within a single locus following the induction of an immune response [goid 2204] [evidence IGI]; The formation of the spindle midzone, the area in the center of the spindle where the spindle microtubules from opposite poles overlap, during the process of meiosis [goid 51257] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence IGI]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence ISO]; Interacting selectively with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding [goid 43566] [evidence IDA]	1110035C23Rik; AI317206; AI325952; AI561766	1110035C23Rik; AI317206; AI325952; AI561766
Mus musculus	RefSeq	ILMN_214404	ILMN_214404	1110018J18RIK	NM_025370.2	NM_025370.2		66129	142385356	NM_025370.2	1110018J18Rik	NP_079646.1	ILMN_2647669	006560458	S	489	CTTCAGAGCCTGTGGCGGGCAGTCACTGGCCCACTTTTTGATTTCCAAGG	13	-	64398603-64398652	13qB3	Mus musculus RIKEN cDNA 1110018J18 gene (1110018J18Rik), mRNA.				AI849003	AI849003
Mus musculus	RefSeq	ILMN_214404	ILMN_214404	1110018J18RIK	NM_025370.2	NM_025370.2		66129	142385356	NM_025370.2	1110018J18Rik	NP_079646.1	ILMN_2674655	006560424	S	495	AGCCTGTGGCGGGCAGTCACTGGCCCACTTTTTGATTTCCAAGGAGACCC	13	-	64398597-64398646	13qB3	Mus musculus RIKEN cDNA 1110018J18 gene (1110018J18Rik), mRNA.				AI849003	AI849003
Mus musculus	RefSeq	ILMN_222435	ILMN_222435	CDC42SE2	NM_178626.2	NM_178626.2		72729	142373958	NM_178626.2	Cdc42se2	NP_848741.1	ILMN_2753604	000430674	S	2871	CTTGTGCTCAGCACCAGAAGACAAGATGGACGTATTTTTATAATCTAAGC	11	-	54531067-54531116	11qB1.3	Mus musculus CDC42 small effector 2 (Cdc42se2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]		RP23-287F5.2; SPEC2; AA408783; 2810404F18Rik; AA536669	RP23-287F5.2; SPEC2; AA408783; 2810404F18Rik; AA536669
Mus musculus	RefSeq	ILMN_222435	ILMN_222435	CDC42SE2	NM_178626.2	NM_178626.2		72729	142373958	NM_178626.2	Cdc42se2	NP_848741.1	ILMN_1257761	005490707	S	84	GCCAGTGTTGAGTGAAACAAACGCAGAAACCAAAAGAGAAGACGTCTTCA	11	-	54570005-54570054	11qB1.3	Mus musculus CDC42 small effector 2 (Cdc42se2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]		RP23-287F5.2; SPEC2; AA408783; 2810404F18Rik; AA536669	RP23-287F5.2; SPEC2; AA408783; 2810404F18Rik; AA536669
Mus musculus	RefSeq	ILMN_231110	ILMN_231110	RHOX10	NM_001024850.2	NM_001024850.2		434769	91206460	NM_001024850.2	Rhox10	NP_001020021.1	ILMN_3162042	004570390	S	610	CGGCTCAGATGAATGAAGACCCCAAGAGTAGTACCTCTGTTCCTGAGGAG	X	+	35424715-35424764	XqA3.3	Mus musculus reproductive homeobox 10 (Rhox10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_209816	ILMN_209816	TEX11	NM_031384.1	NM_031384.1		83558	13878210	NM_031384.1	Tex11	NP_113561.1	ILMN_2599470	002650201	S	3107	AAGCAGACTAGCTCACAGCAACTTGAAGGTGTATATTCATGAGCCGCTGA	X	-	98034078-98034127	XqC3	Mus musculus testis expressed gene 11 (Tex11), mRNA.				4930565P14Rik; BB024231	4930565P14Rik; BB024231
Mus musculus	RefSeq	ILMN_223482	ILMN_258300	ADORA3	NM_027025.2	NM_027025.2		11542	142371336	NM_027025.2	Adora3	NP_081301.1	ILMN_1250508	003420209	S	824	GGGAATGGCTTGAACTGAACATGTGTGACTGAAGATTTCTTTCACTTAGC	3	+	105726878-105726927	3qF2.2	Mus musculus adenosine A3 receptor (Adora3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IMP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IMP]	ARA3; 4930578J19Rik; 1700001D09Rik; MGC118217; A3AR; Gpcr2	ARA3; 4930578J19Rik; 1700001D09Rik; MGC118217; A3AR; Gpcr2
Mus musculus	RefSeq	ILMN_216395	ILMN_216395	STYXL1	NM_029659.3	NM_029659.3		76571	141802896	NM_029659.3	Styxl1	NP_083935.2	ILMN_2680237	001170020	S	881	TCTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTGCACTTGGAGTG	5	-	136223551-136223600	5qG2	Mus musculus serine/threonine/tyrosine interacting-like 1 (Styxl1), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Dusp24; Mkstyx; 1700011C14Rik	Dusp24; Mkstyx; 1700011C14Rik
Mus musculus	RefSeq	ILMN_216395	ILMN_216395	STYXL1	NM_029659.3	NM_029659.3		76571	141802896	NM_029659.3	Styxl1	NP_083935.2	ILMN_1220547	004610543	S	248	CCTCATTCACTTTACCCGCCAACCTGTCTATGTCCTCAGAGGGGGCTATG	5	-	136235057-136235106	5qG2	Mus musculus serine/threonine/tyrosine interacting-like 1 (Styxl1), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Dusp24; Mkstyx; 1700011C14Rik	Dusp24; Mkstyx; 1700011C14Rik
Mus musculus	RefSeq	ILMN_186712	ILMN_186712	UNC84A	NM_024451.1	NM_024451.1		77053	29789242	NM_024451.1	Unc84a	NP_077771.1	ILMN_2437856	003780139	S	3498	GCTGCCCTTGGGTTTGCCTCTACACCATTATCAGCCCTTCTCACTGATTC	5	+	139725191-139725240	5qG2	Mus musculus unc-84 homolog A (C. elegans) (Unc84a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the nuclear inner membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5639] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mKIAA0810; KIAA0810; 4632417G13Rik; SUN1; 5730434D03Rik	mKIAA0810; KIAA0810; 4632417G13Rik; SUN1; 5730434D03Rik
Mus musculus	RefSeq	ILMN_186712	ILMN_186712	UNC84A	NM_024451.1	NM_024451.1		77053	29789242	NM_024451.1	Unc84a	NP_077771.1	ILMN_2986131	001940100	S	3752	TGGCCCAAAGCACATCCCACTCCATAGGGTTAGAGCCACTGCCTGTGTGG	5	+	139725445-139725494	5qG2	Mus musculus unc-84 homolog A (C. elegans) (Unc84a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the nuclear inner membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5639] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mKIAA0810; KIAA0810; 4632417G13Rik; SUN1; 5730434D03Rik	mKIAA0810; KIAA0810; 4632417G13Rik; SUN1; 5730434D03Rik
Mus musculus	RefSeq	ILMN_193077	ILMN_235968	4930402H24RIK	NM_029432.1	NM_029432.1		228602	33695156	NM_029432.1	4930402H24Rik	NP_083708.1	ILMN_1218703	004830102	S	4600	GAGAAAGGGCCCTGGCACAGAGGAGAGGTAAGATGGAGCATATGGGTCTG	2	-	130533890-130533939	2qF1	Mus musculus RIKEN cDNA 4930402H24 gene (4930402H24Rik), mRNA.				C78926; 2810487F15Rik; AI413763	C78926; 2810487F15Rik; AI413763
Mus musculus	MEEBO	ILMN_187816	ILMN_187816	2610036A22RIK	scl0070190.1_295						2610036A22Rik		ILMN_2447362	005490685	S	20	GTGCAAAGTATGGGAAGGCCTTGGATGAAGACAGCCAGTACATTGTTCTT										
Mus musculus	RefSeq	ILMN_212880	ILMN_212880	GNB3	NM_013530.1	NM_013530.1		14695	20502975	NM_013530.1	Gnb3	NP_038558.1	ILMN_1218235	002070370	S	1465	GCCCCGTCTCCTTAGGGTCAGTCTCCTATACTCCAGGGGCCATTCCTAGT	6	-	124785652-124785695:124785696-124785701	6qF2	Mus musculus guanine nucleotide binding protein (G protein), beta 3 (Gnb3), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	Gnb-3	Gnb-3
Mus musculus	Riken	ILMN_206432	ILMN_206432	RASSF1	ri|C230037H14|PX00175E22|AK082319|2376					AK082319	Rassf1		ILMN_1218841	001770538	S	1992	AGGAACCTGAAGGCAGGAGCTGAAGTGGAAGCCATGGTGGGCGCTGCTTA								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210326	ILMN_210326	NEDD4L	NM_031881.1	NM_031881.1		83814	14010860	NM_031881.1	Nedd4l	NP_114087.1	ILMN_2878501	003800608	S	3072	CAGCTCAAGTGCCGCCCCCTCACCGCCAATTCTCAACTGGTTGCCGTGTA	18	+	65372707-65372756	18qE1	Mus musculus neural precursor cell expressed, developmentally down-regulated gene 4-like (Nedd4l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process that decreases the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 10766] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 19871] [evidence IDA]	1300012C07Rik; Nedd4-2; Nedd4b	1300012C07Rik; Nedd4-2; Nedd4b
Mus musculus	Riken	ILMN_203528	ILMN_203528	5330434F23RIK	ri|5330434F23|PX00054D22|AK030578|3088					AK030578	5330434F23Rik		ILMN_1238882	005360204	S	2809	CTCTAATGTGGTAGCAACTGCTTAGGGCAAGTCTGCTCTGCTGTAGCCTG										
Mus musculus	RefSeq	ILMN_219121	ILMN_219121	SERPINB9	NM_009256.3	NM_009256.3		20723	89337275	NM_009256.3	Serpinb9	NP_033282.1	ILMN_2704557	000630722	S	1887	TCTTGTGTATAAAGTCAATAATTTATAGGAAAACATCAGTGCCATGCTGT	13	+	33108314-33108363	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 9 (Serpinb9), mRNA.		A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PI9; PI-9; ovalbumin; BB283241; Spi6; CAP-3; CAP3	PI9; PI-9; ovalbumin; BB283241; Spi6; CAP-3; CAP3
Mus musculus	RefSeq	ILMN_200800	ILMN_200800	LOC384578	XM_357721.1	XM_357721.1			38086244	XM_357721.1	LOC384578		ILMN_1240447	001940138	S	17	GAGCTGCCATGCGAATTGAGTGGAGACAGTGGCAGGCAATGATGGACAGC										
Mus musculus	RefSeq	ILMN_258357	ILMN_258357	IL17RE	NM_001034031.1	NM_001034031.1		57890	77404278	NM_001034031.1	Il17re	NP_001029203.1	ILMN_3162860	000050706	I	151	AGGAAGAGCAGCTTTGAGCCATTCCCAGTGGAGGTATGGATTAGGGACAG	6	+	113410162-113410211	6qE3	Mus musculus interleukin 17 receptor E (Il17re), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AA589509; IL-17RE	AA589509; IL-17RE
Mus musculus	RefSeq	ILMN_218969	ILMN_218969	CHKA	NM_013490.3	NM_013490.3		12660	95147346	NM_013490.3	Chka	NP_038518.2	ILMN_2702540	006960497	S	2417	GTGCAGGTAGATTAGAGCTGTGAAATCCATGTACATTAATACCCAATGGG	19	+	3894213-3894262	19qA	Mus musculus choline kinase alpha (Chka), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + ethanolamine = ADP + O-phosphoethanolamine [goid 4305] [evidence IEA]; Catalysis of the reaction: ATP + choline = ADP + O-phosphocholine [goid 4103] [evidence IDA]; Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion [goid 4104] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Chetk-alpha; ChoK; Chk; EtnK-alpha	Chetk-alpha; ChoK; Chk; EtnK-alpha
Mus musculus	RefSeq	ILMN_221544	ILMN_257270	FNDC1	NM_001081416.1	NM_001081416.1		68655	124487224	NM_001081416.1	Fndc1	NP_001074885.1	ILMN_1240846	004480025	S	5646	CTGGAATTACGGAAGAAAGTATACCCTCTTTGAGATTTATCCTAAAGACC	17	-	7931583-7931632	17qA1	Mus musculus fibronectin type III domain containing 1 (Fndc1), mRNA.				KIAA1866; mKIAA1866; 1110051A18Rik; 1110027O12Rik	KIAA1866; mKIAA1866; 1110051A18Rik; 1110027O12Rik
Mus musculus	MEEBO	ILMN_190715	ILMN_190715	5430406J06RIK	scl40250.1.1_66						5430406J06Rik		ILMN_1230726	000510521	S	17	GCTCGTCCTTACATGTGGATGCTCCTTAATACTGTGCTTTATGAAGGACC										
Mus musculus	RefSeq	ILMN_215602	ILMN_215602	IL17RC	NM_134159.2	NM_134159.2		171095	30841017	NM_134159.2	Il17rc	NP_598920.2	ILMN_2785353	003870039	S	1948	CACGCAGCTGCCGGCTTTCCTGGATGCACTGCAGGGAGGCTGCTCCACTT	6	+	113432927-113432976	6qE3	Mus musculus interleukin 17 receptor C (Il17rc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	IL17-RL; 1110025H02Rik; Il17rl; IL17-RC; IL-17RC	IL17-RL; 1110025H02Rik; Il17rl; IL17-RC; IL-17RC
Mus musculus	RefSeq	ILMN_215602	ILMN_215602	IL17RC	NM_134159.2	NM_134159.2		171095	30841017	NM_134159.2	Il17rc	NP_598920.2	ILMN_2695344	001660170	S	1795	GCATGACGCCCTCGCCGCCTGGCTCAGCTGCGTGCTACCCGATTTCCTGC	6	+	113432774-113432823	6qE3	Mus musculus interleukin 17 receptor C (Il17rc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	IL17-RL; 1110025H02Rik; Il17rl; IL17-RC; IL-17RC	IL17-RL; 1110025H02Rik; Il17rl; IL17-RC; IL-17RC
Mus musculus	RefSeq	ILMN_215602	ILMN_215602	IL17RC	NM_134159.2	NM_134159.2		171095	30841017	NM_134159.2	Il17rc	NP_598920.2	ILMN_2785350	000780711	S	2060	AGCTGTACTTCTAGCTCGGAAGCCCCAGGCTGCTGCGAGGAATGGGACCT	6	+	113433039-113433088	6qE3	Mus musculus interleukin 17 receptor C (Il17rc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	IL17-RL; 1110025H02Rik; Il17rl; IL17-RC; IL-17RC	IL17-RL; 1110025H02Rik; Il17rl; IL17-RC; IL-17RC
Mus musculus	RefSeq	ILMN_184261	ILMN_184261	V1RJ3	NM_145847.1	NM_145847.1		252909	22003905	NM_145847.1	V1rj3	NP_665846.1	ILMN_2417190	007570433	S	767	CCCTTTATGATAGGTTTTATACACGTGGAAGAACAGGAAATCTGGGGGCA	7	-	13669748-13669797	7qA1	Mus musculus vomeronasal 1 receptor, J3 (V1rj3), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC123525; MGC123524	MGC123525; MGC123524
Mus musculus	RefSeq	ILMN_241992	ILMN_241992	LOC545056	NR_002889.1	NR_002889.1		545056	85662388	NR_002889.1	LOC545056		ILMN_2944843	003170703	S	1103	TCTGGAGGAGGGAGACTGGTGGTTCTCAACTCCCTCTTGAGGTTGACTGG	14	-	54964400-54964449	14qC3	Mus musculus ubiquitin-conjugating enzyme E2, J2 homolog pseudogene (LOC545056) on chromosome 14.					
Mus musculus	MEEBO	ILMN_208880	ILMN_208880	0710001C05RIK	scl42971.1_9	XM_203592.1			25023733	XM_203592.1	0710001C05Rik		ILMN_1240205	006450504	S	790	TGGAGTTAACCTCTCTAGCCTTCAGAATTGTTTATATATCTGTGTATAGC										
Mus musculus	MEEBO	ILMN_195919	ILMN_195919	SCL0002124.1_39	scl0002124.1_39						scl0002124.1_39		ILMN_2519944	004830709	S	17	GTTCTGAGCTGGAGGAGGAGCTGAAGAATGTCACCAACAACCTCAAGTCT										
Mus musculus	RefSeq	ILMN_225675	ILMN_225675	KCNIP2	NM_145704.1	NM_145704.1		80906	41281736	NM_145704.1	Kcnip2	NP_663750.1	ILMN_3124037	006620181	A	115	CGGCCTGAGGGTCTGGAACAACTCCAGGAACAAACCAAGTTCACACGCAG	19	-	45870103-45870152	19qC3	Mus musculus Kv channel-interacting protein 2 (Kcnip2), transcript variant c, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	KChIP2b; AI851528; KChIP2a; KChIP2	KChIP2b; AI851528; KChIP2a; KChIP2
Mus musculus	RefSeq	ILMN_200168	ILMN_200168	LOC385849	XM_358972.1	XM_358972.1			38080764	XM_358972.1	LOC385849		ILMN_2537818	004230278	S	274	CACAAATGGGGGCAAACCTGGAAATGGAAAAACCTAAGAAAGAGGTCAGG										
Mus musculus	RefSeq	ILMN_200063	ILMN_200063	LOC385672	XM_358901.1	XM_358901.1			38080182	XM_358901.1	LOC385672		ILMN_2537465	003400300	S	60	GGCGCAGGAAGCACATCAGCTTTGGGTTGTAGATCCCTTTAGCTCCTTGG										
Mus musculus	RefSeq	ILMN_200063	ILMN_200063	LOC385672	XM_358901.1	XM_358901.1			38080182	XM_358901.1	LOC385672		ILMN_2726956	004640097	S	2091	CCCATGGCCTTAACAGAGGAAATGTCTATAAACTCTGCTTTGAAGACTGG										
Mus musculus	MEEBO	ILMN_187085	ILMN_187085	SCL0003184.1_14	scl0003184.1_14	AK052897.1			26343074	AK052897.1	scl0003184.1_14		ILMN_2441038	005090333	S	5	CTGGAGTTGGAAATTAAAGGCAAGGGAATGCAAATTGACACCGATACCCT										
Mus musculus	Riken	ILMN_207197	ILMN_207197	A930005K01RIK	ri|A930005K01|PX00662A05|AK080703|1566					AK080703	A930005K01Rik		ILMN_2585774	006200332	S	1423	CTCAGGACCCAGAAATGCCAGGGGACAGTGAAGTGAAAGAATGGAGACGG										
Mus musculus	RefSeq	ILMN_194849	ILMN_234995	SLC39A2	XM_989872.1	XM_989872.1		214922	94398039	XM_989872.1	Slc39a2	XP_994966.1	ILMN_2510187	002140435	S	189	GCACTGATAGACATCTGGTAGACCATTCAGGTTCAGCGCTCAGGTTCTGC				14qC2	PREDICTED: Mus musculus solute carrier family 39 (zinc transporter), member 2, transcript variant 2 (Slc39a2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]		
Mus musculus	RefSeq	ILMN_219483	ILMN_219483	THSD7B	NM_172485.2	NM_172485.2		210417	40254218	NM_172485.2	Thsd7b	NP_766073.2	ILMN_2709428	007050521	S	5986	GCTAATCCTTTGTAATCCCAGATGTTGGAAGTAAGAAGGTGCCATTGTGT	1	+	132115758-132115807	1qE4	Mus musculus thrombospondin, type I, domain containing 7B (Thsd7b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700074E13Rik; B930082A18; D130067I03Rik	1700074E13Rik; B930082A18; D130067I03Rik
Mus musculus	RefSeq	ILMN_219483	ILMN_219483	THSD7B	NM_172485.2	NM_172485.2		210417	40254218	NM_172485.2	Thsd7b	NP_766073.2	ILMN_2949380	001690242	S	5559	TTTGTAGCCAGGGGATGATGGCACTTTGTGGGCTGCATCTGTTGAGACAG	1	+	132115331-132115380	1qE4	Mus musculus thrombospondin, type I, domain containing 7B (Thsd7b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700074E13Rik; B930082A18; D130067I03Rik	1700074E13Rik; B930082A18; D130067I03Rik
Mus musculus	RefSeq	ILMN_219483	ILMN_219483	THSD7B	NM_172485.2	NM_172485.2		210417	40254218	NM_172485.2	Thsd7b	NP_766073.2	ILMN_2737697	002970605	S	3073	GCTCCAATATAAATGGAAGACCGGTTGACCCCTCATTCTGCAACAGCTCT	1	+	131818041-131818090	1qE4	Mus musculus thrombospondin, type I, domain containing 7B (Thsd7b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700074E13Rik; B930082A18; D130067I03Rik	1700074E13Rik; B930082A18; D130067I03Rik
Mus musculus	MEEBO	ILMN_212628	ILMN_212628	D830007F02RIK	scl34536.9.1_26	NM_175441.2			31341913	NM_175441.2	D830007F02Rik		ILMN_2628613	003390437	S	1625	CTTGATCCAACTTTATGATGCGTTTGAGAGCAAGAGCAGCTTCACTCTGA										
Mus musculus	RefSeq	ILMN_220754	ILMN_220754	DNMBP	NM_028029.2	NM_028029.2		71972	118130402	NM_028029.2	Dnmbp	NP_082305.1	ILMN_2726333	001240703	S	2368	AGAGCCAAGGTGGTGGCGGAGCTTTTGCAGACGGAGAGAGACTACATCCG	19	-	43949368-43949417	19qC3	Mus musculus dynamin binding protein (Dnmbp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TUBA; 2410003M15Rik; 2410003L07Rik	TUBA; 2410003M15Rik; 2410003L07Rik
Mus musculus	RefSeq	ILMN_220754	ILMN_220754	DNMBP	NM_028029.2	NM_028029.2		71972	118130402	NM_028029.2	Dnmbp	NP_082305.1	ILMN_1218651	004390280	S	4837	TCCCGAGCAGGGACCCACCACACTGCCTATCCATAACTCGGAGCGCAAGA	19	-	43922457-43922506	19qC3	Mus musculus dynamin binding protein (Dnmbp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TUBA; 2410003M15Rik; 2410003L07Rik	TUBA; 2410003M15Rik; 2410003L07Rik
Mus musculus	RefSeq	ILMN_202472	ILMN_318976	5830468F06RIK	XR_035292.1	XR_035292.1		76082	149258390	XR_035292.1	5830468F06Rik		ILMN_1247281	006760470	S	914	ACACACCTCTGAAGGGAAGAACCACCCCGAATGTGGGAGGCACCATCTTC	8	-	15015232-15015281	8qA1.1	PREDICTED: Mus musculus RIKEN cDNA 5830468F06 gene (5830468F06Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_186237	ILMN_186237	TTC12	NM_172770.1	NM_172770.1		235330	27370131	NM_172770.1	Ttc12	NP_766358.1	ILMN_1240730	001190386	S	6	CCATGCCTGGGGCCATGTATTCTGTAAATAGAGGAGTCAGAAGTTAAGGG	9	-	49238400-49238449	9qA5.3	Mus musculus tetratricopeptide repeat domain 12 (Ttc12), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	E330017O07Rik	E330017O07Rik
Mus musculus	RefSeq	ILMN_215921	ILMN_215921	GRM1	NM_016976.1	NM_016976.1		14816	34328062	NM_016976.1	Grm1	NP_058672.1	ILMN_2665238	004670402	S	3858	TGAGGATTCGCCTGCCCTGACGCCCCCTTCTCCTTTCCGAGATTCCGTGG	10	-	10408879-10408928	10qA1	Mus musculus glutamate receptor, metabotropic 1 (Grm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence TAS]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence TAS]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43408] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]; Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 51930] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A G-protein coupled receptor that binds glutamate and is linked to the inositol 1,4,5-trisphosphate/calcium signaling system [goid 1639] [evidence TAS]	MGC90744; wobl; mGluR1; 4930455H15Rik; Gprc1a	MGC90744; wobl; mGluR1; 4930455H15Rik; Gprc1a
Mus musculus	Riken	ILMN_203180	ILMN_203180	A430105D21RIK	ri|A430105D21|PX00064J10|AK040528|2940					AK040528	A430105D21Rik		ILMN_2555335	006550021	S	2509	GGAGTGAGCCATCAGGCCCAGCTCATCTCCATAGCTTTGTCTCTGAGCAG										
Mus musculus	RefSeq	ILMN_223416	ILMN_223416	RPAP3	NM_028003.2	NM_028003.2		71919	142374453	NM_028003.2	Rpap3	NP_082279.1	ILMN_2763772	005260703	S	1636	TGGGAGTGAGAAGGCCTCCGTGAGGGCAGAGCAGATGCCGGGTCAGCTGG	15	-	97510866-97510915	15qF1	Mus musculus RNA polymerase II associated protein 3 (Rpap3), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2310042P20Rik; D15Ertd682e	2310042P20Rik; D15Ertd682e
Mus musculus	RefSeq	ILMN_217907	ILMN_217907	RANBP9	NM_019930.1	NM_019930.1		56705	9910285	NM_019930.1	Ranbp9	NP_064314.1	ILMN_2689160	004830338	S	1655	GTCAGGCTGCCATAGAGAGGATGATTCACTTTGGCCGAGAGCTACAAGCC	13	-	43507839-43507888	13qA4	Mus musculus RAN binding protein 9 (Ranbp9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [evidence ISA]	IBAP-1; Ibap1; RanBPM	IBAP-1; Ibap1; RanBPM
Mus musculus	Riken	ILMN_203721	ILMN_203721	RAF1	ri|9630056E02|PX00117J17|AK036317|2164					AK036317	Raf1		ILMN_1237730	001740553	S	2062	GTCTGGCATACTAGCACATGACTGGAGTCCCAGCACTCTGGAGGACTGTA						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5057] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198295	ILMN_326750	AI507611	XM_001477461.1	XM_001477461.1		245884	149254893	XM_001477461.1	AI507611	XP_001477511.1	ILMN_2531176	002680066	S	995	GGAGAGAACTTGTTGGGACCCTAATACCTAGCCAGAGTCGGGTGTTGGCC	6	+	29240495-29240518:29240519-29240544	6qA3.3	PREDICTED: Mus musculus expressed sequence AI507611, transcript variant 1 (AI507611), mRNA.					
Mus musculus	RefSeq	ILMN_239618	ILMN_239618	NOLC1	NM_001039353.1	NM_001039353.1		70769	86198332	NM_001039353.1	Nolc1	NP_001034442.1	ILMN_3125651	006060296	A	3430	AAGCTGTAGGATGTGACCATTGGCAGTGAGGGCAGGGGTGGGACGTGGCT	19	+	46157493-46157542	19qC3	Mus musculus nucleolar and coiled-body phosphoprotein 1 (Nolc1), transcript variant 4, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [evidence TAS]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly the nucleolus [goid 7000] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU046071; mKIAA0035; P130; NOPP140; AA408077; NOPP130; AA536818; 3230402K17Rik	AU046071; mKIAA0035; P130; NOPP140; AA408077; NOPP130; AA536818; 3230402K17Rik
Mus musculus	RefSeq	ILMN_220667	ILMN_220667	STT3A	NM_008408.2	NM_008408.2		16430	31560679	NM_008408.2	Stt3a	NP_032434.2	ILMN_1250253	001410196	S	3577	GGGCTTTTCCTTCAAACCGGTGTATGTACTGTGTATTTTAACTGTGGGTG	9	-	36481217-36481266	9qA4	Mus musculus STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) (Stt3a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected [goid 8250] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [evidence ISS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a oligosaccharyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 4576] [evidence IEA]; Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [evidence IEA]	Itm1; BB081708; AA408947	Itm1; BB081708; AA408947
Mus musculus	RefSeq	ILMN_200196	ILMN_200196	LOC385917	XM_358997.1	XM_358997.1			38080878	XM_358997.1	LOC385917		ILMN_2537914	001260431	S	67	ATTCGGAACATTGAGACTTCTGAAGAAATTAAAAAGCTACGGAAACAACT										
Mus musculus	Riken	ILMN_205247	ILMN_205247	E230022A01RIK	ri|E230022A01|PX00210E13|AK087599|2652					AK087599	E230022A01Rik		ILMN_1235821	001990703	S	2128	CTACTTACCTGTTCTACCCTTTTCCAGCTACTTCCAACCCTGGGGTAACC										
Mus musculus	Riken	ILMN_202198	ILMN_202198	1700086E08RIK	ri|1700086E08|ZX00076J13|AK007015|598					AK007015	1700086E08Rik		ILMN_1216451	003360176	S	471	GCACACAAAAAAACCAAGCAGTTGAGGTGCGTATCCCAGGAATCCATAGG										
Mus musculus	Riken	ILMN_204614	ILMN_204614	A930007D05RIK	ri|A930007D05|PX00065F21|AK044315|2658					AK044315	A930007D05Rik		ILMN_1233915	002320538	S	2363	ACTTCCTGACAGAATCAGCACCGTGGACAACGCCTACCCAGTGGCTCCTG										
Mus musculus	Riken	ILMN_205681	ILMN_205681	D430034A07RIK	ri|D430034A07|PX00194F21|AK052483|4491					AK052483	D430034A07Rik		ILMN_2574438	003990673	S	4113	CACACTGACAGAGAAGTAATGATTGGGGCAGAGAGTTGTGAAGGAACTTG										
Mus musculus	Riken	ILMN_205559	ILMN_205559	6030422A11RIK	ri|6030422A11|PX00056I12|AK031389|4021					AK031389	6030422A11Rik		ILMN_2573491	004920209	S	3524	GGCCTTCCAGCTTTGCAGCCAAACACTGACTTCTCTCCACAAAACCCTAG										
Mus musculus	MEEBO	ILMN_219565	ILMN_219565	SLC6A19	scl43765.13_159	XM_127449.2			38075373	XM_127449.2	Slc6a19		ILMN_1215045	001430113	S	3537	ACAGAGGCATAAGATGGGGGTTGGCCCTGGGAGAATATGAAGAGTCTCAC						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of neutral amino acids, amino acids with no net charge, into, out of, within or between cells [goid 15804] [evidence IDA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]		
Mus musculus	Riken	ILMN_206936	ILMN_206936	AKAP12	ri|D430035C11|PX00195E03|AK085088|1495					AK085088	Akap12		ILMN_1246068	002760736	S	1393	GCCTGTTGGCTGTTTTCCAGCACGTGTTTGTGAGCAAGAGTTCGCTCGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]	Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212915	ILMN_212915	CHD1L	NM_026539.2	NM_026539.2		68058	142379831	NM_026539.2	Chd1l	NP_080815.1	ILMN_1216292	002570768	S	1780	GGAGCCCAGTAAGGAAGACAGAAAGTCATTTGAGCAGCTGGTGAATCTTC	3	-	97376542-97376591	3qF2.2	Mus musculus chromodomain helicase DNA binding protein 1-like (Chd1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Snf2p; 4432404A22Rik	Snf2p; 4432404A22Rik
Mus musculus	RefSeq	ILMN_215856	ILMN_215856	OLFR979	NM_147108.1	NM_147108.1		259112	22128734	NM_147108.1	Olfr979	NP_667319.1	ILMN_2935140	002900102	S	767	TTATCTACCTGAGGCCAGGCTCCAGGGATGCTGTGGATGGAGTTGTGGCT	9	-	39807994-39808043	9qA5.1	Mus musculus olfactory receptor 979 (Olfr979), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR223-1	MOR223-1
Mus musculus	RefSeq	ILMN_215856	ILMN_215856	OLFR979	NM_147108.1	NM_147108.1		259112	22128734	NM_147108.1	Olfr979	NP_667319.1	ILMN_1228380	000060154	S	213	CTCCACAGTCACAGTACCCAAAATGTTGATGACGTTGGTTTCCCCAAGGG	9	-	39808548-39808597	9qA5.1	Mus musculus olfactory receptor 979 (Olfr979), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR223-1	MOR223-1
Mus musculus	RefSeq	ILMN_224364	ILMN_224364	RASGRP2	NM_011242.1	NM_011242.1		19395	6755289	NM_011242.1	Rasgrp2	NP_035372.1	ILMN_2784144	000160612	S	1995	CGCTGTGACTATCAAGGACTCATTCCTGCCTTGGAGAAAAGACTTGGAGC	19	+	6414853-6414854:6414994-6415041	19qA	Mus musculus RAS, guanyl releasing protein 2 (Rasgrp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CDC25L	CDC25L
Mus musculus	RefSeq	ILMN_211074	ILMN_211074	CSK	NM_007783.2	NM_007783.2		12988	31560711	NM_007783.2	Csk	NP_031809.2	ILMN_1229530	000730039	S	1859	CCGTGCAGCTGGCCTCCTCAAGGCCCCACCATTCGCCTTCTTAGAGTTTT	9	-	57474820-57474869	9qB	Mus musculus c-src tyrosine kinase (Csk), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	Any process that modulates the frequency, rate or extent of T cell activation [goid 50863] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW212630	AW212630
Mus musculus	RefSeq	ILMN_198440	ILMN_310234	LOC623374	XM_001480361.1	XM_001480361.1		623374	149255320	XM_001480361.1	LOC623374	XP_001480411.1	ILMN_1228842	004920204	S	1112	GTCTTATGGAACAAGCAGTTCTGATGGGAGGGTGTCATTTGTGGCTCCAG	6	+	124202505-124202554	6qF2	PREDICTED: Mus musculus similar to putative glialblastoma cell differentiation-related (LOC623374), mRNA.					
Mus musculus	RefSeq	ILMN_197695	ILMN_251227	D630023B12RIK	XM_907047.3	XM_907047.3		329679	149251515	XM_907047.3	D630023B12Rik	XP_912140.3	ILMN_1258854	000510209	S	751	GATATGCCAAGCAGAGGGCAGAATGAAGACAGGGACAGCGGCATTGCTCG					PREDICTED: Mus musculus RIKEN cDNA D630023B12 gene (D630023B12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200561	ILMN_198294	THSD7A	XM_287555.7	XM_287555.7		330267	149254852	XM_287555.7	Thsd7a	XP_287555.6	ILMN_1259240	001570731	S	4905	GCCCTCCATTAACCCAGCAGGACGGGGCAGGACATGGTTTCTACAGCCAT	6	-	12270915-12270964	6qA1	PREDICTED: Mus musculus thrombospondin, type I, domain containing 7A, transcript variant 1 (Thsd7a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_196613	ILMN_196613	B230218L05RIK	NM_207260.1	NM_207260.1		330998	46402266	NM_207260.1	B230218L05Rik	NP_997143.1	ILMN_2822888	000060500	S	2087	GGGAAAGAACCTAATCTAGAGCAACACATCCCATAGCCCCCCTTCACCCC	9	-	89526480-89526529	9qE3.1	Mus musculus RIKEN cDNA B230218L05 gene (B230218L05Rik), mRNA.				BB276295; Gm771	BB276295; Gm771
Mus musculus	RefSeq	ILMN_200654	ILMN_228011	LOC633661	XM_983583.1	XM_983583.1		633661	94406495	XM_983583.1	LOC633661	XP_988677.1	ILMN_2539530	001440382	S	94	GATCTCGCGCTCTTCCTGCTAGGGAGTAAGGAAAGCCTGGAAGAAGACCT					PREDICTED: Mus musculus similar to Prostatic steroid-binding protein C1 chain precursor (Prostatein peptide C1) (LOC633661), mRNA.					
Mus musculus	MEEBO	ILMN_192570	ILMN_192570	2500002G23RIK	scl072306.1_301				51714354	XM_289903	2500002G23Rik		ILMN_2489314	001740445	S	2	CAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCT										
Mus musculus	RefSeq	ILMN_187501	ILMN_244969	ZBTB1	NM_178744.1	NM_178744.1		268564	30520188	NM_178744.1	Zbtb1	NP_848859.1	ILMN_2477267	005910273	S	3377	GTAAATCCCAATGACTTTCCCTCACTTGAGAAATTAGTGGGGATAAGCCA	12	+	77489124-77489173	12qC3	Mus musculus zinc finger and BTB domain containing 1 (Zbtb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Bsg2; C430003J21Rik; 9430077A12	Bsg2; C430003J21Rik; 9430077A12
Mus musculus	RefSeq	ILMN_198592	ILMN_198592	GM715	XM_205232.5	XM_205232.5		279618	149271650	XM_205232.5	Gm715	XP_205232.2	ILMN_1247896	001400431	S	644	CTCAAGATGGAGGTATTGCCAGCAGTGGGCGATGGAAAAGTAGCTTCCTC	X	+	57801837-57801886	XqA6	PREDICTED: Mus musculus gene model 715, (NCBI) (Gm715), mRNA.					
Mus musculus	RefSeq	ILMN_200408	ILMN_200408	LOC383200	XM_356919.1	XM_356919.1			38081706	XM_356919.1	LOC383200		ILMN_2538649	005490468	S	3	GTGTGAGGCCTTGAGTCGTCCCCAGCAGTGTGAAAGGTGCTTTAAAAGTC										
Mus musculus	MEEBO	ILMN_209345	ILMN_209345	1500026H17RIK	scl38578.3_589				51765791	XM_483938	1500026H17Rik		ILMN_2594919	000360605	S	2870	CCCATTCCTAATGGATACTTTAAAAAATATAACCGAGAGTTACCTGGCAA										
Mus musculus	Riken	ILMN_207400	ILMN_207400	G430020K10RIK	ri|G430020K10|PH00001A24|AK089946|2963					AK089946	G430020K10Rik		ILMN_2587321	004780161	S	2597	GACAGCACAGGGGAGTCAGACATTCCACAAAGGAGAGGAAAGAGGGCCTG										
Mus musculus	MEEBO	ILMN_215352	ILMN_215352	1700006H03RIK	scl0002427.1_4	XM_128158.4			38077195	XM_128158.4	1700006H03Rik		ILMN_2658475	004890072	S	116	TTATTACAGTGCCCCTATGATAAAAATCACCAGATCAGGGCCTGCAGGTT										
Mus musculus	RefSeq	ILMN_198229	ILMN_198229	EG224763	XM_290014.2	XM_290014.2		224763	38083027	XM_290014.2	EG224763	XP_290014.2	ILMN_2530939	007100452	S	32	TGGTAAACTATTTCAGGAGATTCACTCATGGACTGATGTCTGTCCTATTC	17	+	37297671-37297716:37299012-37299015	17qB1	PREDICTED: Mus musculus predicted gene, EG224763 (EG224763), mRNA.					
Mus musculus	RefSeq	ILMN_196529	ILMN_241664	1300018I17RIK	XM_925142.3	XM_925142.3		72325	149259376	XM_925142.3	1300018I17Rik	XP_930235.3	ILMN_2654443	006020692	S	2551	AGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTG				8qE1	PREDICTED: Mus musculus RIKEN cDNA 1300018I17 gene, transcript variant 15 (1300018I17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209117	ILMN_209117	IFNGR2	NM_008338.2	NM_008338.2		15980	34328133	NM_008338.2	Ifngr2	NP_032364.1	ILMN_2592709	000580682	S	1025	TTCTCCAGAAAAGGAGCGAGATGATGTGCTCCAAACACCGTGAACCAGGC	16	+	91451821-91451864:91451865-91451870	16qC3.3	Mus musculus interferon gamma receptor 2 (Ifngr2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ifgr2; Ifgt	Ifgr2; Ifgt
Mus musculus	RefSeq	ILMN_209117	ILMN_209117	IFNGR2	NM_008338.2	NM_008338.2		15980	34328133	NM_008338.2	Ifngr2	NP_032364.1	ILMN_2784272	007650338	S	1667	GTGCACACCTTTACTCCTGGCACTTGGGAGGCAGAGGCAGGAGGATCTCT	16	+	91452463-91452512	16qC3.3	Mus musculus interferon gamma receptor 2 (Ifngr2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ifgr2; Ifgt	Ifgr2; Ifgt
Mus musculus	RefSeq	ILMN_242057	ILMN_242057	CLPP	NM_017393.1	NM_017393.1		53895	8393155	NM_017393.1	Clpp	NP_059089.1	ILMN_2982890	007160753	S	828	CCTCCTGCCCCGACAAGCACCTAAGGAGTGGAGACCAGACTGAAACTTCC	17	+	57135460-57135470:57135471-57135509	17qD	Mus musculus caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli) (Clpp), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of misfolded or attenuated proteins [goid 6515] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]	D17Wsu160e; AU019820	D17Wsu160e; AU019820
Mus musculus	RefSeq	ILMN_201427	ILMN_201427	LOC385145	XM_358086.1	XM_358086.1			38093627	XM_358086.1	LOC385145		ILMN_2542253	003310706	S	1005	CGTTGGTGATAGCAAGCAGGTTACTGGAGAAGAGTCAGACGTGGATACCG										
Mus musculus	RefSeq	ILMN_209841	ILMN_209841	ACP6	NM_019800.3	NM_019800.3		66659	141801701	NM_019800.3	Acp6	NP_062774.2	ILMN_1242352	001030386	S	1433	CCATGGAACTCTACCAGCACCAAGAATCTAAGGAGTGGTTTGTGCAACTC	3	+	96979653-96979702	3qF2.1	Mus musculus acid phosphatase 6, lysophosphatidic (Acp6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	5730559A09Rik; AU022842; ACPL1; mPACPL1	5730559A09Rik; AU022842; ACPL1; mPACPL1
Mus musculus	RefSeq	ILMN_219572	ILMN_219572	KCTD4	NM_026214.3	NM_026214.3		67516	50980304	NM_026214.3	Kctd4	NP_080490.3	ILMN_2710665	006620056	S	2373	CCCACTTATGTTGCAAAGAGCACCTGCACCACTCCTGTGGCTTCACCTAC	14	+	76364382-76364431	14qD3	Mus musculus potassium channel tetramerisation domain containing 4 (Kctd4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	2210017A09Rik; AU017169	2210017A09Rik; AU017169
Mus musculus	RefSeq	ILMN_222761	ILMN_222761	LTF	NM_008522.3	NM_008522.3		17002	141803548	NM_008522.3	Ltf	NP_032548.2	ILMN_2754364	006940037	S	2225	CAGACCATCTGGTCTCCTCACTCCCTGCTGTCACTTTAGGTAGAAATAAA	9	+	110944753-110944802	9qF3	Mus musculus lactotransferrin (Ltf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]	N lobe; Lf; MMS10-R; Ms10r	N lobe; Lf; MMS10-R; Ms10r
Mus musculus	RefSeq	ILMN_199671	ILMN_199671	LOC383810	XM_357270.1	XM_357270.1			38075894	XM_357270.1	LOC383810		ILMN_1226853	000290133	S	460	GAGGAGCCAGAGAAGAACAAGGGAATGACAGGGGGAGTGGGCAAGAATGG										
Mus musculus	RefSeq	ILMN_251907	ILMN_251907	GSG1	NM_001080552.1	NM_001080552.1		14840	123317840	NM_001080552.1	Gsg1	NP_001074021.1	ILMN_3119043	006860377	A	967	CTGACGTGCACAACCCACGCAGGGGAACCTTTGTCCAGCTGCCATCAGTA	6	-	135187553-135187602	6qG1	Mus musculus germ cell-specific gene 1 (Gsg1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]				
Mus musculus	RefSeq	ILMN_210692	ILMN_210692	DNAJA3	NM_023646.3	NM_023646.3		83945	142350102	NM_023646.3	Dnaja3	NP_076135.2	ILMN_2608238	002000128	S	2397	GGTAGCATGCTGCAGCTTCTGTGTTAAAGGTCCTCTGGAGCTCGTGTAAG	16	+	4707497-4707546	16qA1	Mus musculus DnaJ (Hsp40) homolog, subfamily A, member 3 (Dnaja3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IPI]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The process of apoptosis in activated T cells [goid 6924] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence ISA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whereby new strands of DNA are synthesized in the mitochondrion [goid 6264] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IPI]	1810053A11Rik; C81173; Tid1l; Tid-1; 1200003J13Rik	1810053A11Rik; C81173; Tid1l; Tid-1; 1200003J13Rik
Mus musculus	RefSeq	ILMN_210692	ILMN_210692	DNAJA3	NM_023646.3	NM_023646.3		83945	142350102	NM_023646.3	Dnaja3	NP_076135.2	ILMN_1215738	004150215	S	1389	AGGCGAGAGGCTGGGGAGGACAATGAGGGATTCCTTTCCAAACTTAAGAA	16	+	4705882-4705931	16qA1	Mus musculus DnaJ (Hsp40) homolog, subfamily A, member 3 (Dnaja3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IPI]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The process of apoptosis in activated T cells [goid 6924] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence ISA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whereby new strands of DNA are synthesized in the mitochondrion [goid 6264] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IPI]	1810053A11Rik; C81173; Tid1l; Tid-1; 1200003J13Rik	1810053A11Rik; C81173; Tid1l; Tid-1; 1200003J13Rik
Mus musculus	Riken	ILMN_202213	ILMN_202213	MKNK1	ri|2410048M24|ZX00080C09|AK010697|1380					AK010697	Mknk1		ILMN_2547867	006130647	S	923	GGCCTGAGCAGTCCTTTGGCTTTCAAACGGATCCCACCCAGTTGCTAATG							A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197130	ILMN_252553	EG226957	XM_915277.2	XM_915277.2		226957	94363188	XM_915277.2	EG226957	XP_920370.2	ILMN_1242181	007400072	S	715	CCCTGGTTCTGGAGCGTTTGGTGGTGGATGGTGGATTCATCTTTTGATTC				1qB	PREDICTED: Mus musculus predicted gene, EG226957 (EG226957), mRNA.					
Mus musculus	RefSeq	ILMN_223310	ILMN_223310	KIF22	NM_145588.1	NM_145588.1		110033	21704181	NM_145588.1	Kif22	NP_663563.1	ILMN_2762326	004210246	S	1969	CTTGGCCGCCAGCCAGCACAGCGGTCCCTCTTGACACTACCTTCTTTTAA	7	-	134171290-134171306:134171307-134171339	7qF3	Mus musculus kinesin family member 22 (Kif22), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	AU021460; C81217; Kif22a; Kid	AU021460; C81217; Kif22a; Kid
Mus musculus	RefSeq	ILMN_197902	ILMN_313077	GM436	NM_001085504.1	NM_001085504.1		230890	147905892	NM_001085504.1	Gm436	NP_001078973.1	ILMN_2529767	007160053	S	1103	CCTGGCACCATGTGATGGATGGCTTTCATGGATGCGTCCTTCTGTTTGAT				4qE1	Mus musculus gene model 436, (NCBI) (Gm436), mRNA.					
Mus musculus	RefSeq	ILMN_241902	ILMN_241902	ITGB8	NM_177290.3	NM_177290.3		320910	124249085	NM_177290.3	Itgb8	NP_796264.2	ILMN_2980316	007560440	S	2302	TGGCAGGTGTGAGTGTACTGATCCCAGAAGCATTGGCCGTCTCTGTGAGC	12	-	120406508-120406557	12qF2	Mus musculus integrin beta 8 (Itgb8), mRNA. XM_919665 XM_986358 XM_986389 XM_986421	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The chemical reactions and pathways involving ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1573] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4832412O06Rik	4832412O06Rik
Mus musculus	RefSeq	ILMN_212648	ILMN_212648	RRS1	NM_021511.1	NM_021511.1		59014	10946929	NM_021511.1	Rrs1	NP_067486.1	ILMN_2628848	006290189	S	1677	GACCCCTTGTTTTAGGAAAACTTTGGCCCTAACTATAATATTAAAAGTAT	1	+	9537199-9537248	1qA2	Mus musculus RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) (Rrs1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		5730466A07Rik; D1Ertd701e; Rrr; AA415037	5730466A07Rik; D1Ertd701e; Rrr; AA415037
Mus musculus	RefSeq	ILMN_198436	ILMN_198436	LOC235855	XM_135370.3	XM_135370.3			38085118	XM_135370.3	LOC235855		ILMN_2531677	000520242	S	1099	CTGGAGAAGCTTGTAGAACTGAGAGACTTCATGTCATCAGTGACTAAGGC										
Mus musculus	RefSeq	ILMN_248618	ILMN_248618	SCTR	NM_001012322.1	NM_001012322.1		319229	60685208	NM_001012322.1	Sctr	NP_001012322.1	ILMN_3073395	006980669	I	963	CTGCAAGCTGGTCATGATCTTCTTCCAGTACTGCATCATGGCCAACTACG	1	+	121943241-121943290	1qE2.3	Mus musculus secretin receptor (Sctr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC102218; 6530402O03Rik	MGC102218; 6530402O03Rik
Mus musculus	RefSeq	ILMN_248618	ILMN_248618	SCTR	NM_001012322.1	NM_001012322.1		319229	60685208	NM_001012322.1	Sctr	NP_001012322.1	ILMN_3152204	004280129	A	1572	TCAGCAACTCCTTCAGCAACGCCACCAACGGCCCCACCCACAGCACCAAG	1	+	121959757-121959806	1qE2.3	Mus musculus secretin receptor (Sctr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC102218; 6530402O03Rik	MGC102218; 6530402O03Rik
Mus musculus	RefSeq	ILMN_219450	ILMN_219450	EDN3	NM_007903.3	NM_007903.3		13616	142351300	NM_007903.3	Edn3	NP_031929.1	ILMN_2709083	006130161	S	2530	GTAGGATTCATCTAGAGAGGAAAGTATAGACCAAGGCGGGTGGGCAGCTA	2	+	174609110-174609159	2qH4	Mus musculus endothelin 3 (Edn3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A decrease in the diameter of blood vessels, especially arteries, usually causing an increase in blood pressure [goid 42310] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IMP]		ls	ls
Mus musculus	RefSeq	ILMN_186453	ILMN_186453	ZFP422	NM_026057.2	NM_026057.2		67255	142388585	NM_026057.2	Zfp422	NP_080333.1	ILMN_2435673	006860521	S	3064	GGAGGCTTCTATGGTGACCAGTGTACTTTGTGTTCCATTTTAGAAACGTC	6	-	116574085-116574134	6qE3	Mus musculus zinc finger protein 422 (Zfp422), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence NAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Krox-25-2; Krox26; AU041373; Krox25; Krox-26; KOX15; 2900028O21Rik	Krox-25-2; Krox26; AU041373; Krox25; Krox-26; KOX15; 2900028O21Rik
Mus musculus	RefSeq	ILMN_186453	ILMN_186453	ZFP422	NM_026057.2	NM_026057.2		67255	142388585	NM_026057.2	Zfp422	NP_080333.1	ILMN_2477702	002450246	S	2207	CTTCCTGTATTAATGACAATTATCCTTAAAAATAAAGATTAAGATATTTT	6	-	116574942-116574991	6qE3	Mus musculus zinc finger protein 422 (Zfp422), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence NAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Krox-25-2; Krox26; AU041373; Krox25; Krox-26; KOX15; 2900028O21Rik	Krox-25-2; Krox26; AU041373; Krox25; Krox-26; KOX15; 2900028O21Rik
Mus musculus	Riken	ILMN_203112	ILMN_203112	4930419B13RIK	ri|4930419B13|PX00030I01|AK029639|806					AK029639	4930419B13Rik		ILMN_1246050	005340682	S	404	CGAAGCAGAGCAGAGAACACCAGGTTAAACTATTCCCCACCACAGCTGCG										
Mus musculus	RefSeq	ILMN_216676	ILMN_216676	CDC37L1	NM_025950.1	NM_025950.1		67072	13385439	NM_025950.1	Cdc37l1	NP_080226.1	ILMN_2918032	004480435	S	2174	CCAGCATACAGGAGCGCTAGCTTTGGTTATTTTTGAGTGTGATTTTTGGC	19	+	29083223-29083272	19qC1	Mus musculus cell division cycle 37 homolog (S. cerevisiae)-like 1 (Cdc37l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	Cdc37l; Harc; BB159850; 2700033A15Rik	Cdc37l; Harc; BB159850; 2700033A15Rik
Mus musculus	RefSeq	ILMN_188801	ILMN_233457	GBP5	NM_153564.2	NM_153564.2		229898	91064875	NM_153564.2	Gbp5	NP_705792.2	ILMN_1218150	007000440	S	2944	GGAGAGAATTGCCTGTTTATGTTAGTCTCATTCTGTGTTCAATAAAATGG	3	+	142185231-142185280	3qH1	Mus musculus guanylate binding protein 5 (Gbp5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	Gbp5a; 5330409J06Rik	Gbp5a; 5330409J06Rik
Mus musculus	RefSeq	ILMN_188801	ILMN_233457	GBP5	NM_153564.2	NM_153564.2		229898	91064875	NM_153564.2	Gbp5	NP_705792.2	ILMN_1244866	005900520	S	2403	CTTGCCCAGGTATATTGCTCACTTTCTACCACAGGAATTCTTAACCACAG	3	+	142184690-142184739	3qH1	Mus musculus guanylate binding protein 5 (Gbp5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	Gbp5a; 5330409J06Rik	Gbp5a; 5330409J06Rik
Mus musculus	RefSeq	ILMN_209232	ILMN_209232	ELP2	NM_021448.2	NM_021448.2		58523	134032029	NM_021448.2	Elp2	NP_067423.2	ILMN_1216985	003850228	S	2480	GGCGAGGACCATACCGTGAAGATTTACAGGGTTAACAGACGCGCACTGTG	18	+	24797022-24797071	18qA2	Mus musculus elongation protein 2 homolog (S. cerevisiae) (Elp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation [goid 8023] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the JAK-STAT signaling pathway [goid 46425] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]	Statip1; Epl2; StIP1; AU023723	Statip1; Epl2; StIP1; AU023723
Mus musculus	MEEBO	ILMN_214449	ILMN_214449	PPAN	scl37238.1_20				21704227	NM_145610	Ppan		ILMN_2772174	005550471	S	1511	CTGGGATCCAGTGCAGTCCGGTTTCCTTTTATAAAGGAACTGCCCAGTTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process whereby external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time [goid 1560] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_188686	ILMN_250672	6720418B01RIK	XM_984113.1	XM_984113.1		77892	94370348	XM_984113.1	6720418B01Rik	XP_989207.1	ILMN_2454823	002940717	S	95	ATCCAATTCCCTTATCTTGGGCCTGCTGCCCTCCCGAGGAAGAACGCCAC				3qG3	PREDICTED: Mus musculus RIKEN cDNA 6720418B01 gene (6720418B01Rik), mRNA.					
Mus musculus	MEEBO	ILMN_215365	ILMN_215365	AI849286	scl30948.10_348	XM_194372.3			38087799	XM_194372.3	AI849286		ILMN_2658610	002680035	S	2540	CCGAGAACCAGTCTGAGAAGCTCCAGATTCGCTCAGGCCCTTGATCATCA										
Mus musculus	RefSeq	ILMN_217956	ILMN_217956	FANCB	NM_175027.3	NM_175027.3		237211	54020736	NM_175027.3	Fancb	NP_778192.2	ILMN_2689773	005560551	S	2327	TGATTTAAAATATTCCATAATTATTTGCCTCACTTGTTAGGTTTTGATAA	X	+	161435137-161435186	XqF5	Mus musculus Fanconi anemia, complementation group B (Fancb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]		BC022692; MGC31411	BC022692; MGC31411
Mus musculus	RefSeq	ILMN_214601	ILMN_214601	OLFR361	NM_146368.1	NM_146368.1		258365	22129562	NM_146368.1	Olfr361	NP_666480.1	ILMN_1225711	007650025	S	690	GCTGCCCTGCAGAAAGCTCTGTCCACTTGTAGCTCTCATGTTCTTGTTGT	2	-	36940527-36940576	2qB	Mus musculus olfactory receptor 361 (Olfr361), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR159-3	MOR159-3
Mus musculus	RefSeq	ILMN_201589	ILMN_229932	SYNPO	XM_981156.1	XM_981156.1		104027	94404912	XM_981156.1	Synpo	XP_986250.1	ILMN_1217858	007380315	S	3299	AGACTCCGACGTGTCTCTCGACTCCGAGGATTCTGGGCTTAAGTCGCCTG				18qD3	PREDICTED: Mus musculus synaptopodin, transcript variant 2 (Synpo), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence ISO]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence NAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30865] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]		
Mus musculus	RefSeq	ILMN_188605	ILMN_253862	PGK1	NM_008828.2	NM_008828.2		18655	70778975	NM_008828.2	Pgk1	NP_032854.2	ILMN_2651886	005690341	S	1433	TCCACATCTCCATTTGGTGTTAGCGCAAGATTCAGCTAGTGGCTGAGATG	X	+	103398670-103398719	XqD	Mus musculus phosphoglycerate kinase 1 (Pgk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate [goid 4618] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC118097; Pgk-1	MGC118097; Pgk-1
Mus musculus	RefSeq	ILMN_253862	ILMN_253862	PGK1	NM_008828.2	NM_008828.2		18655	70778975	NM_008828.2	Pgk1	NP_032854.2	ILMN_2797973	005810487	S	20	GAAGGTCCTCCGGAGGCCCGGCATTCTGCACGCTTCAAAAGCGCACGTCT	X	+	103382482-103382531	XqD	Mus musculus phosphoglycerate kinase 1 (Pgk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate [goid 4618] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC118097; Pgk-1	MGC118097; Pgk-1
Mus musculus	RefSeq	ILMN_200200	ILMN_200200	LOC385924	XM_359001.1	XM_359001.1			38080886	XM_359001.1	LOC385924		ILMN_1258424	002510113	S	1021	GAGGTTCAGAGTCCATCATGGGTGAGAAAGCCTAGCAGCCAGTTCTTGGC										
Mus musculus	Riken	ILMN_204331	ILMN_204331	6030458B15RIK	ri|6030458B15|PX00057F21|AK031596|2951					AK031596	6030458B15Rik		ILMN_1230827	004900465	S	2722	AGCTTCTTTCAGATAACCCAGAGTGCCAGGGGGCCCACAGATGAATCTTC										
Mus musculus	RefSeq	ILMN_224967	ILMN_224967	NUBPL	NM_029760.1	NM_029760.1		76826	110626046	NM_029760.1	Nubpl	NP_084036.1	ILMN_2994613	004480255	S	926	AGGACTGACAGGAACCAGACAGTGGTTACAACTGAGATAAAAGGTGGCCC	12	+	53245385-53245434	12qC1	Mus musculus nucleotide binding protein-like (Nubpl), mRNA. XM_990907			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2410170E07Rik	2410170E07Rik
Mus musculus	RefSeq	ILMN_190686	ILMN_224967	NUBPL	NM_029760.1	NM_029760.1		76826	110626046	NM_029760.1	Nubpl	NP_084036.1	ILMN_1257272	004920259	S	559	CCTGAGAGGAAATCCAGAATTATCACCAAGTGAGTACAGAAAAGATGAAG	12	+	53245018-53245067	12qC1	Mus musculus nucleotide binding protein-like (Nubpl), mRNA. XM_990907			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2410170E07Rik	2410170E07Rik
Mus musculus	RefSeq	ILMN_217007	ILMN_217007	ZFP473	NM_178734.3	NM_178734.3		243963	144922647	NM_178734.3	Zfp473	NP_848849.2	ILMN_1218315	001440450	S	3188	GGCCTTCATTTGAAGCCAGCCATTGAAACCAACCCATTGCAAACCTCTGC	7	-	51987423-51987472	7qB4	Mus musculus zinc finger protein 473 (Zfp473), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4932441F21; D030014N22Rik	4932441F21; D030014N22Rik
Mus musculus	RefSeq	ILMN_189774	ILMN_189774	TSHB	NM_009432.1	NM_009432.1		22094	6678442	NM_009432.1	Tshb	NP_033458.1	ILMN_1215013	000580600	S	12	GTGACTGCATACACGAGGCTGTCAGAACCAACTACTGCACCAAGCCGCAG	3	-	102586576-102586625	3qF2.2	Mus musculus thyroid stimulating hormone, beta subunit (Tshb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC151206; MGC151208	MGC151206; MGC151208
Mus musculus	RefSeq	ILMN_213093	ILMN_213093	OLFR815	NM_146670.1	NM_146670.1		258665	33239329	NM_146670.1	Olfr815	NP_666881.1	ILMN_2943561	006130674	S	560	CTCTCCTACAGCTCTCTTGCTCAAACACAAATTTACTAGACCTGATGGCT	10	-	129339173-129339222	10qD3	Mus musculus olfactory receptor 815 (Olfr815), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR113-3	MOR113-3
Mus musculus	RefSeq	ILMN_193884	ILMN_235539	TMCC3	NM_172051.2	NM_172051.2		319880	78771619	NM_172051.2	Tmcc3	NP_742048.2	ILMN_2732604	003400672	S	2552	ACTTTTAGGTCTAATCAAATGGTGGCAAGAGTAGTGGGAGCTCTTGACCC	10	+	94050745-94050794	10qC2	Mus musculus transmembrane and coiled coil domains 3 (Tmcc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C88213; C630016B22Rik; Tmcc1; AW488095; MGC30586	C88213; C630016B22Rik; Tmcc1; AW488095; MGC30586
Mus musculus	RefSeq	ILMN_217388	ILMN_217388	LGALS7	NM_008496.4	NM_008496.4		16858	49619226	NM_008496.4	Lgals7	NP_032522.2	ILMN_2871441	007040184	S	278	CTTCAACACCAAAGAACAAGGCAAATGGGGCCGTGAGGAGCGAGGCACCG	7	+	29650640-29650689	7qA3	Mus musculus lectin, galactose binding, soluble 7 (Lgals7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Galectin-7; MGC151215; MGC151217	Galectin-7; MGC151215; MGC151217
Mus musculus	RefSeq	ILMN_217388	ILMN_217388	LGALS7	NM_008496.4	NM_008496.4		16858	49619226	NM_008496.4	Lgals7	NP_032522.2	ILMN_2703182	003710520	S	482	GCTGCATTCAGTGAAGATCTTCTAAGCAAGGACCCAAGGGCGTGGCGGGT	7	+	29651188-29651212:29651213-29651237	7qA3	Mus musculus lectin, galactose binding, soluble 7 (Lgals7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Galectin-7; MGC151215; MGC151217	Galectin-7; MGC151215; MGC151217
Mus musculus	RefSeq	ILMN_222902	ILMN_222902	OLFR642	NM_146329.1	NM_146329.1		258326	22122856	NM_146329.1	Olfr642	NP_666441.1	ILMN_1246982	001300192	S	555	CCTGATACGCTTGCCCTGTGGAGATACCACCATCAACAGCATGTATGGGC	7	-	111198262-111198311	7qE3	Mus musculus olfactory receptor 642 (Olfr642), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR13-6	MOR13-6
Mus musculus	MEEBO	ILMN_213798	ILMN_213798	2900005J15RIK	scl28025.1.9_4	NM_026059.2			31981071	NM_026059.2	2900005J15Rik		ILMN_2640900	003190497	S	1297	TGGTGTGCCAGGATGCATAAATGGTACCATGTGATGAGAAAGAAGTGGCT										
Mus musculus	Riken	ILMN_203711	ILMN_203711	9630044E13RIK	ri|9630044E13|PX00116J04|AK036177|3499					AK036177	9630044E13Rik		ILMN_1221035	003180280	S	3048	GCTCAGTTCCTGGCCACCTTAACATAAAGCCGCATGCCAAGAATCCATTC										
Mus musculus	RefSeq	ILMN_216012	ILMN_216012	OIT3	NM_010959.2	NM_010959.2		18302	142345064	NM_010959.2	Oit3	NP_035089.1	ILMN_2666330	004920471	S	2157	CCTAAAATCTCAACCCCAGTATAGAGTATTTAAAGGGGATTTGAAAGTCT	10	-	58886217-58886266	10qB4	Mus musculus oncoprotein induced transcript 3 (Oit3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	EF-9; LZP	EF-9; LZP
Mus musculus	RefSeq	ILMN_196375	ILMN_196375	4833422P03RIK	XM_146046.1	XM_146046.1			20844190	XM_146046.1	4833422P03Rik		ILMN_2523877	002650184	S	1727	CTGAGCCGATGACAGACTGTGACCTCATCTTTCTCTCGCAGGAGCAGTCA										
Mus musculus	RefSeq	ILMN_209326	ILMN_209326	NACC1	NM_025788.2	NM_025788.2		66830	31543308	NM_025788.2	Nacc1	NP_080064.2	ILMN_2594746	000160196	S	4022	CTTAGCAGGAAAGACAAGTAGGGGCAAACCCAGTGGCTACCCTCCCACCC	8	-	87194583-87194632	8qC3	Mus musculus nucleus accumbens associated 1, BEN and BTB (POZ) domain containing (Nacc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2010001H03Rik; 4930511N13Rik; Nac1	2010001H03Rik; 4930511N13Rik; Nac1
Mus musculus	RefSeq	ILMN_209326	ILMN_209326	NACC1	NM_025788.2	NM_025788.2		66830	31543308	NM_025788.2	Nacc1	NP_080064.2	ILMN_2842767	005290437	S	4078	GCCTCTCATGGGGACAGGCCATCACCCACTGGCCCATGTGAAGTGCCAAT	8	-	87194527-87194576	8qC3	Mus musculus nucleus accumbens associated 1, BEN and BTB (POZ) domain containing (Nacc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2010001H03Rik; 4930511N13Rik; Nac1	2010001H03Rik; 4930511N13Rik; Nac1
Mus musculus	RefSeq	ILMN_209326	ILMN_209326	NACC1	NM_025788.2	NM_025788.2		66830	31543308	NM_025788.2	Nacc1	NP_080064.2	ILMN_1257864	004860403	S	1760	CACACCCTCACCTATCACCTACCTGGTCACGATCTACTGTCTGTCCCTCC	8	-	87196845-87196894	8qC3	Mus musculus nucleus accumbens associated 1, BEN and BTB (POZ) domain containing (Nacc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2010001H03Rik; 4930511N13Rik; Nac1	2010001H03Rik; 4930511N13Rik; Nac1
Mus musculus	RefSeq	ILMN_206974	ILMN_219223	SLC16A9	NM_025807.3	NM_025807.3		66859	146135051	NM_025807.3	Slc16a9	NP_080083.2	ILMN_1231291	004810240	S	3418	GGGACAGAAGAGGGTGCCGGATCCCCTGGAGCTGGAGTTAGGCTTTAGTT				10qB5.3	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 9 (Slc16a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	1200003C15Rik; AI552636; 4930425B13Rik	1200003C15Rik; AI552636; 4930425B13Rik
Mus musculus	Riken	ILMN_201715	ILMN_201715	2310079P03RIK	ri|2310079P03|ZX00040N10|AK010232|925					AK010232	2310079P03Rik		ILMN_1218128	006900762	S	842	GATAATGTCAGCAGTCAGAGAAGAAGACCCACTGGAATTGGCCAACACGC										
Mus musculus	RefSeq	ILMN_200103	ILMN_200103	LOC384197	XM_358738.1	XM_358738.1			38080383	XM_358738.1	LOC384197		ILMN_1251141	007160682	S	321	ACATGCTGGTGGAGACAGGGTAGATGCTGATGGAGACAGGGTGCTGGTGG										
Mus musculus	RefSeq	ILMN_221596	ILMN_221596	GNAT2	NM_008141.2	NM_008141.2		14686	31982843	NM_008141.2	Gnat2	NP_032167.1	ILMN_2737604	004070259	S	1454	AAGAGCACAGACCTAACTGAAGGGGAGGCCCAGGGTAGCTGGCTGCTGTG	3	+	107904029-107904078	3qF2.3	Mus musculus guanine nucleotide binding protein, alpha transducing 2 (Gnat2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of guanylyl cyclase and a subsequent increase in the concentration of cyclic GMP [goid 7199] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events involved in visual perception in which a sensory light stimulus is received by a cell and converted into a molecular signal [goid 50908] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision [goid 46549] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	AW490837; Gt-2; Tcalpha; Gnat-2	AW490837; Gt-2; Tcalpha; Gnat-2
Mus musculus	RefSeq	ILMN_216093	ILMN_216093	ASS1	NM_007494.3	NM_007494.3		11898	133893196	NM_007494.3	Ass1	NP_031520.1	ILMN_1247811	007560338	S	1451	TTTGTAATTGTAGCTTGTTCTCCACCACCTGACTGGGGCTGCTGTGTCCC	2	+	31376010-31376059	2qB	Mus musculus argininosuccinate synthetase 1 (Ass1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6526] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate [goid 4055] [evidence IEA]	AA408052; Ass-1; ASS; MGC103151	AA408052; Ass-1; ASS; MGC103151
Mus musculus	Riken	ILMN_201853	ILMN_201853	3830403L08RIK	ri|3830403L08|PX00007O15|AK014414|1681					AK014414	3830403L08Rik		ILMN_1213214	001340392	S	1384	CATGGACATTTAGAGAACAACTTTCCTGGGTGGAGTGAAAGAGCTCAGCC										
Mus musculus	RefSeq	ILMN_188424	ILMN_258858	TSIX	NR_002844.1	NR_002844.1		22097	84872141	NR_002844.1	Tsix		ILMN_1256650	000990553	S	4012	CACCGTGTACATCAAGGTATGTCAGGTTTCGGGGACACTTTTTAGTCTTA	X	+	100680002-100680051	XqD	Mus musculus X (inactive)-specific transcript, antisense (Tsix), non-coding RNA.		Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IMP]; Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IGI]; Maintenance of transcription by remodelling of chromatin into an 'open configuration'. Once established, this regulation is mitotically stable and is maintained over many cell divisions. It is also heritable [goid 48096] [evidence IMP]			
Mus musculus	RefSeq	ILMN_217150	ILMN_217150	FHL4	NM_010214.2	NM_010214.2		14202	31560589	NM_010214.2	Fhl4	NP_034344.2	ILMN_2793982	004210202	S	2242	CCTGTAAAAGTGACAAACTAAATGGGTGGCCAAGAAATGCAAAGCTATCA	10	-	84527109-84527158	10qC1	Mus musculus four and a half LIM domains 4 (Fhl4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189471	ILMN_189471	SCL0002474.1_1	scl0002474.1_1	AK010858.1			12846590	AK010858.1	scl0002474.1_1		ILMN_2461562	002030411	S	9	TGCTGTCTACCAGGAGAACATTGCAGGCTTGGCCCGCCGCTCTGGACTGC										
Mus musculus	RefSeq	ILMN_196941	ILMN_196941	LOC381284	XM_355224.1	XM_355224.1			38050352	XM_355224.1	LOC381284		ILMN_2526333	007100747	S	4960	CTGGTGATCCAACCAAGGTGCTTCCTGGTGATCCAACCAAGGTGCTCCCT										
Mus musculus	RefSeq	ILMN_193160	ILMN_252080	ZBTB44	NM_172765.2	NM_172765.2		235132	117606327	NM_172765.2	Zbtb44	NP_766353.2	ILMN_2589136	004210670	S	3080	GATATTCTAGATTGGGATATACTTTTTTATCTTTTGCCATTAAAGCCTCT	9	+	30877741-30877790	9qA4	Mus musculus zinc finger and BTB domain containing 44 (Zbtb44), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6030404E16Rik; Btbd15	6030404E16Rik; Btbd15
Mus musculus	Riken	ILMN_202752	ILMN_202752	4632427C23RIK	ri|4632427C23|PX00013E24|AK019504|2927					AK019504	4632427C23Rik		ILMN_2552013	005810376	S	2229	CGGAATGGGCAGGGCCATGGGAGGATGGATGCTCAAAGAAATGTACAGAC										
Mus musculus	MEEBO	ILMN_195799	ILMN_195799	ZNF24	scl0331360.1_192						Znf24		ILMN_2518828	000770706	S	20	ATTCTCTTTTTTTCTCTCCAGGTAATGAGCTACCTGGTTCTTTGTCCCTT										
Mus musculus	RefSeq	ILMN_235202	ILMN_235202	KRT83	NM_001003668.1	NM_001003668.1		406219	51092290	NM_001003668.1	Krt83	NP_001003668.1	ILMN_2820127	003520246	S	714	ACAGGAGACCGACTTCCTGAGGCAACTGTATGAAGAGGAAACACGTCTCC	15	-	101264523-101264536:101265012-101265047	15qF2	Mus musculus keratin 83 (Krt83), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			Krt2-25	Krt2-25
Mus musculus	RefSeq	ILMN_199452	ILMN_199452	LOC383491	XM_357091.1	XM_357091.1			38049388	XM_357091.1	LOC383491		ILMN_1222112	007550594	S	1329	CGTCCATGAGAGGCACCGGCCCTACCTGTGTTCAACCTGTGGGAAAAGTT										
Mus musculus	RefSeq	ILMN_221474	ILMN_221474	DHX34	NM_027883.3	NM_027883.3		71723	148540197	NM_027883.3	Dhx34	NP_082159.3	ILMN_1242021	002100612	S	3648	TACCACTGCCAGGTGTGCGGGCAGGACTTCCTCTTTACCCCAACTGAGGT				7qA2	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 34 (Dhx34), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1200013B07Rik; mKIAA0134; Ddx34; 1810012L18Rik	1200013B07Rik; mKIAA0134; Ddx34; 1810012L18Rik
Mus musculus	MEEBO	ILMN_192556	ILMN_192556	4930525F21RIK	scl075823.1_90						4930525F21Rik		ILMN_2489185	006290047	S	8	CACGACTGTGATCTCCCATGTGAGGAAAGTCCAAACCTTCTGACCTGGTT										
Mus musculus	RefSeq	ILMN_213637	ILMN_227227	LOC635860	XM_991837.1	XM_991837.1		635860	94378706	XM_991837.1	LOC635860	XP_996931.1	ILMN_2639196	005080382	S	131	CTTGTCGGGCTAGTCAGGGCATTAGAGGTAATTTAGACTGGTATCAGCAG					PREDICTED: Mus musculus similar to Ig kappa chain V-V region MOPC 173B precursor (LOC635860), mRNA.					
Mus musculus	RefSeq	ILMN_216552	ILMN_216552	ARHGAP22	NM_153800.3	NM_153800.3		239027	141802510	NM_153800.3	Arhgap22	NP_722495.2	ILMN_2672380	005420754	S	2530	GGCCACCCAAAAGGATGGCACCTTGAGAGCCAGGCCACCAAGAACTTTAT	14	+	34183054-34183103	14qB	Mus musculus Rho GTPase activating protein 22 (Arhgap22), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	MGC47316; p68RacGAP; B230341L19Rik; RHOGAP2	MGC47316; p68RacGAP; B230341L19Rik; RHOGAP2
Mus musculus	RefSeq	ILMN_213428	ILMN_254123	LOC673286	XM_001005186.1	XM_001005186.1		673286	94418855	XM_001005186.1	LOC673286	XP_001005186.1	ILMN_2636971	000780128	S	171	GCAGAGGCCTGGCCAAGGCCTTGAGTGGATTGGAAGGATTCATCCTTCTG					PREDICTED: Mus musculus similar to Ig heavy chain V region 102 precursor (LOC673286), mRNA.					
Mus musculus	RefSeq	ILMN_196590	ILMN_196590	DEFCR-RS2	NM_007847.1	NM_007847.1		13222	6681168	NM_007847.1	Defcr-rs2	NP_031873.1	ILMN_1231872	000070025	S	2	CACATTGAATTCCTGCTCTCCAATCATCTAGGTGACTCGCAGCCATGAAG					Mus musculus defensin related cryptdin, related sequence 2 (Defcr-rs2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]		CRS4C1d; Defcr-rs3; CRS4C1e; CRS4C-1; CRS4C1h; CRS4C1g; CRS4C1j; CRS4C1f; CRS4C1i; CRS4C	CRS4C1d; Defcr-rs3; CRS4C1e; CRS4C-1; CRS4C1h; CRS4C1g; CRS4C1j; CRS4C1f; CRS4C1i; CRS4C
Mus musculus	RefSeq	ILMN_217243	ILMN_217243	CYSLTR1	NM_021476.4	NM_021476.4		58861	146134915	NM_021476.4	Cysltr1	NP_067451.2	ILMN_2680770	006510678	S	2074	GCACCGGCAAAAGAATGGTGTTCTTGCTCACAGTGGTTCAATCCCTATTC				XqD	Mus musculus cysteinyl leukotriene receptor 1 (Cysltr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a leukotriene to initiate a change in cell activity. Leukotrienes are pharmacologically active substances with a set of three conjugated double bonds; some contain a peptide moiety based on cysteine [goid 4974] [evidence IDA]	CysLT1R; Cyslt1; BB147369	CysLT1R; Cyslt1; BB147369
Mus musculus	RefSeq	ILMN_223211	ILMN_223211	PPP1R8	NM_146154.1	NM_146154.1		100336	22122684	NM_146154.1	Ppp1r8	NP_666266.1	ILMN_2760840	006420470	S	1568	CCCCTCATCTGTAGCCAGTGTCACAGGACAGGCTAATGGGTTTGTACAGT	4	-	132383214-132383263	4qD2.3	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 8 (Ppp1r8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulation of the activity of the enzyme protein phosphatase type 1 [goid 8599] [evidence IDA]	6330548N22Rik; MGC38560; AU044684; NIPP1	6330548N22Rik; MGC38560; AU044684; NIPP1
Mus musculus	RefSeq	ILMN_210834	ILMN_210834	TTC22	NM_177667.3	NM_177667.3		230576	142377354	NM_177667.3	Ttc22	NP_808335.1	ILMN_1235331	002360156	S	2266	GTAACTTTCTATCCCTGATGCCTGAGTGACTACCACTGGCTTCCCAAGGG	4	+	106312523-106312572	4qC7	Mus musculus tetratricopeptide repeat domain 22 (Ttc22), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP23-97O7.2; 4732467L16Rik	RP23-97O7.2; 4732467L16Rik
Mus musculus	Riken	ILMN_201873	ILMN_201873	FBXW2	ri|4921510D21|PX00014A04|AK014858|1524					AK014858	Fbxw2		ILMN_1218824	000270039	S	1185	CTTATACCTGTCAGACTAAGGGCATTGAGAGCAGGAAGTCCATGCCTGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]			
Mus musculus	RefSeq	ILMN_200004	ILMN_239905	GM1673	NM_001033458.2	NM_001033458.2		381633	141801766	NM_001033458.2	Gm1673	NP_001028630.1	ILMN_1238310	004830519	S	278	CCTTCAGGACCTACGGAAAACCGCCTACAGCCTGGACGCACGGACGGAGA	5	+	34326747-34326789:34327547-34327553	5qB2	Mus musculus gene model 1673, (NCBI) (Gm1673), mRNA. XM_922421					
Mus musculus	Riken	ILMN_203613	ILMN_203613	A930014B10RIK	ri|A930014B10|PX00066O14|AK044453|3457					AK044453	A930014B10Rik		ILMN_1235706	004860093	S	3026	CTTCCGTGGCTGTGGTGATGGATTAGGGAGAGGCTGAATCTTGAACTCGC										
Mus musculus	RefSeq	ILMN_195053	ILMN_224800	SORL1	NM_011436.3	NM_011436.3		20660	142372316	NM_011436.3	Sorl1	NP_035566.2	ILMN_1249578	006960577	S	6446	GGGTCATAACTACACTTTCACGGTCCAAGCGCGGTGTCTCTTTGGTAGCC	9	-	41782067-41782116	9qA5.1	Mus musculus sortilin-related receptor, LDLR class A repeats-containing (Sorl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AW261561; AI596264; mSorLA; LR11; 2900010L19Rik; gp250	AW261561; AI596264; mSorLA; LR11; 2900010L19Rik; gp250
Mus musculus	RefSeq	ILMN_227029	ILMN_227029	A830080D01RIK	NM_001033472.2	NM_001033472.2		382252	115511061	NM_001033472.2	A830080D01Rik	NP_001028644.2	ILMN_2962575	005260315	S	2600	GAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAGCATGGTTTCACTGAG	X	+	156030247-156030296	XqF4	Mus musculus RIKEN cDNA A830080D01 gene (A830080D01Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			Gm1146; 2310067E24Rik; RP23-39I7.3	Gm1146; 2310067E24Rik; RP23-39I7.3
Mus musculus	RefSeq	ILMN_200905	ILMN_227029	A830080D01RIK	NM_001033472.2	NM_001033472.2		382252	115511061	NM_001033472.2	A830080D01Rik	NP_001028644.2	ILMN_2588597	002190273	S	3129	CATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAG	X	+	156030776-156030825	XqF4	Mus musculus RIKEN cDNA A830080D01 gene (A830080D01Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			Gm1146; 2310067E24Rik; RP23-39I7.3	Gm1146; 2310067E24Rik; RP23-39I7.3
Mus musculus	RefSeq	ILMN_192149	ILMN_192149	TNFRSF8	NM_009401.2	NM_009401.2		21941	118130411	NM_009401.2	Tnfrsf8	NP_033427.1	ILMN_2485458	007150270	S	1419	AGCTGAACTAGAAGTGGACCATGCCCCCCATTACCCGGAGCAGGAGACAG	4	-	144858985-144859034	4qE1	Mus musculus tumor necrosis factor receptor superfamily, member 8 (Tnfrsf8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cd30; RP23-306F22.1; Ki; Ki-1; D1S166E	Cd30; RP23-306F22.1; Ki; Ki-1; D1S166E
Mus musculus	RefSeq	ILMN_192149	ILMN_192149	TNFRSF8	NM_009401.2	NM_009401.2		21941	118130411	NM_009401.2	Tnfrsf8	NP_033427.1	ILMN_2514689	001850114	S	867	CAGCAGGATGCAGCCCACCTCTCCATTGTCCACGGGAACACCATTTCTGG	4	-	144877887-144877936	4qE1	Mus musculus tumor necrosis factor receptor superfamily, member 8 (Tnfrsf8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cd30; RP23-306F22.1; Ki; Ki-1; D1S166E	Cd30; RP23-306F22.1; Ki; Ki-1; D1S166E
Mus musculus	RefSeq	ILMN_212604	ILMN_212604	HOXC13	NM_010464.2	NM_010464.2		15422	118130022	NM_010464.2	Hoxc13	NP_034594.1	ILMN_2628366	003190209	S	2134	GGGGTGACATCATTGGTCCTGGATAAACCAGCTAAATGTAGACGCTGCCT	15	+	102758946-102758995	15qF3	Mus musculus homeo box C13 (Hoxc13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The process by which the anatomical structures of the tongue are generated and organized. Morphogenesis pertains to the creation of form. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in man other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech [goid 43587] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_199460	ILMN_199460	LOC382587	XM_356581.1	XM_356581.1			38049467	XM_356581.1	LOC382587		ILMN_1235147	002070132	S	238	CCCCTGGAAGGGAGAAGGAGGACAGTCCCAAGCATCCAGAATCAAGCATC										
Mus musculus	RefSeq	ILMN_218034	ILMN_218034	MTF1	NM_008636.2	NM_008636.2		17764	31543268	NM_008636.2	Mtf1	NP_032662.2	ILMN_2690755	001300653	S	5239	GCCTGAGTTTTGCCTGAGGCTTTGTATTATGCTGAATGTGTCCAGAGGGA	4	+	124349735-124349784	4qD2.2	Mus musculus metal response element binding transcription factor 1 (Mtf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus [goid 46686] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Initiates or upregulates transcription in the presence of zinc [goid 42156] [evidence IDA]	Thyls; MTF-1	Thyls; MTF-1
Mus musculus	MEEBO	ILMN_189649	ILMN_189649	MJ-3000-114_1506	MJ-3000-114_1506						MJ-3000-114_1506		ILMN_1250238	006380754	S	1	CAGATGGCGGCATGTTTAGGGCAGCAGTCAGTTAGAGGTAAGAGAATCTT										
Mus musculus	RefSeq	ILMN_197696	ILMN_251954	EG627094	XM_891750.3	XM_891750.3		627094	149251234	XM_891750.3	EG627094	XP_896843.2	ILMN_2529043	001570053	S	4653	CATTGCTTTCTGCAGGTGAGGATATCAGGCCTCTGGGTCCCGCTCAAGGC	3	+	82933850-82933899	3qE3	PREDICTED: Mus musculus predicted gene, EG627094 (EG627094), mRNA.					
Mus musculus	RefSeq	ILMN_214840	ILMN_214840	EPDR1	NM_134065.3	NM_134065.3		105298	142372189	NM_134065.3	Epdr1	NP_598826.2	ILMN_1225494	007550431	S	1792	CCTCGCCTGAATTCATTGCATCTTACACCTTGGCATGCCTTGCTCACAAT	13	-	19684095-19684144	13qA2	Mus musculus ependymin related protein 1 (zebrafish) (Epdr1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MERP2; Epdm2; Ucc1; AU040950; MERP-1; AV006210; MERP-2; Epdr2	MERP2; Epdm2; Ucc1; AU040950; MERP-1; AV006210; MERP-2; Epdr2
Mus musculus	RefSeq	ILMN_219171	ILMN_219171	BMP6	NM_007556.2	NM_007556.2		12161	118131176	NM_007556.2	Bmp6	NP_031582.1	ILMN_2705217	003800348	S	2325	CTCTCGGTGGTGTGAGAATGTACTAATCTCTGTCAAGACAAACTGTAGCA	13	+	38591512-38591561	13qA3.3	Mus musculus bone morphogenetic protein 6 (Bmp6), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12151307] [evidence IEP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Vgr-1; D13Wsu115e; Vgr1	Vgr-1; D13Wsu115e; Vgr1
Mus musculus	RefSeq	ILMN_217318	ILMN_217318	MUC13	NM_010739.1	NM_010739.1		17063	6754575	NM_010739.1	Muc13	NP_034869.1	ILMN_2717678	004880386	S	2872	CTGTCTGACGTCTGGTCCTCTCGAAAGGTATTTTTGTTATTATTTGTTCT	16	+	33819916-33819965	16qB3	Mus musculus mucin 13, epithelial transmembrane (Muc13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Lrrp; 14/A10; 114/A10; AI159736; NJ-1; Ly64	Lrrp; 14/A10; 114/A10; AI159736; NJ-1; Ly64
Mus musculus	RefSeq	ILMN_217318	ILMN_217318	MUC13	NM_010739.1	NM_010739.1		17063	6754575	NM_010739.1	Muc13	NP_034869.1	ILMN_2681805	006350608	S	1532	CGGAGTAATGGATTGTGTGTGCATGCCGGGCTACCAGAGGGCAAACGGGA	16	+	33811913-33811962	16qB3	Mus musculus mucin 13, epithelial transmembrane (Muc13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Lrrp; 14/A10; 114/A10; AI159736; NJ-1; Ly64	Lrrp; 14/A10; 114/A10; AI159736; NJ-1; Ly64
Mus musculus	Riken	ILMN_204231	ILMN_204231	A730062O07RIK	ri|A730062O07|PX00151P06|AK043167|3158					AK043167	A730062O07Rik		ILMN_1248556	000060075	S	2987	TTAGTGTTCTCAGCGCCAGGGTTGGGCAGCTCACGACGACCTGTAACTCC										
Mus musculus	RefSeq	ILMN_220234	ILMN_245492	MYPN	XM_905765.2	XM_905765.2		68802	94388313	XM_905765.2	Mypn	XP_910858.2	ILMN_2719479	001690102	S	2335	ATGTTCAACCTGGCCCGGCCGAAGCACTTCTTCCCCGCTTCAAGCACTTC				10qB4	PREDICTED: Mus musculus myopalladin (Mypn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218354	ILMN_245492	MYPN	XM_905765.2	XM_905765.2		68802	94388313	XM_905765.2	Mypn	XP_910858.2	ILMN_2694687	002070195	S	4672	CATTATCCTACCTGTGGAGTCACGTAATAAGAAGCCAAAATGTGCCTGAG				10qB4	PREDICTED: Mus musculus myopalladin (Mypn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219869	ILMN_219869	BTG2	NM_007570.2	NM_007570.2		12227	84875511	NM_007570.2	Btg2	NP_031596.1	ILMN_1256772	002060246	S	2535	GCGCTTTTATATGGAAGACTGTACAGCTTTATGGACAAATGTAAACTTTC	1	-	135971940-135971989	1qE4	Mus musculus B-cell translocation gene 2, anti-proliferative (Btg2), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence ISO]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pc3; AA959598; TIS21; APRO1	Pc3; AA959598; TIS21; APRO1
Mus musculus	RefSeq	ILMN_218912	ILMN_218912	NCAPD3	NM_178113.2	NM_178113.2		78658	31342477	NM_178113.2	Ncapd3	NP_835214.1	ILMN_2701851	002750114	S	4256	GTGCACTGCCAGCTCCTGCCTAGGACATCAGTGTGTCTTTGTGCAGCTTG	9	+	26902477-26902526	9qA4	Mus musculus non-SMC condensin II complex, subunit D3 (Ncapd3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		AI195468; 4632407J06Rik; 2810487N22Rik; AU018739; B130055D15Rik; mKIAA0056	AI195468; 4632407J06Rik; 2810487N22Rik; AU018739; B130055D15Rik; mKIAA0056
Mus musculus	RefSeq	ILMN_195113	ILMN_310559	LOC100045804	XM_001473846.1	XM_001473846.1		100045804	149274663	XM_001473846.1	LOC100045804	XP_001473896.1	ILMN_2512710	002030561	S	43	CTGTGGATGGACTGGGAGAGCCATGGAGAGAAGGTCGAGCAACACGAGTC					PREDICTED: Mus musculus similar to TRAV10 (LOC100045804), mRNA.					
Mus musculus	RefSeq	ILMN_199749	ILMN_310559	LOC100045804	XM_001473846.1	XM_001473846.1		100045804	149274663	XM_001473846.1	LOC100045804	XP_001473896.1	ILMN_1234370	005900301	S	149	CTGCTTCATCATACTTCCCTTGGTACAAGCAAGAAGCTGGAAAGGGTCTC					PREDICTED: Mus musculus similar to TRAV10 (LOC100045804), mRNA.					
Mus musculus	RefSeq	ILMN_221580	ILMN_221580	AHR	NM_013464.4	NM_013464.4		11622	142369296	NM_013464.4	Ahr	NP_038492.1	ILMN_2737460	001260452	S	5384	ACTTGCTTACATATGCCATGCATAGATTTTTGTTAAAGTATGATTTATAA	12	-	36183577-36183626	12qA3	Mus musculus aryl-hydrocarbon receptor (Ahr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence TAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcriptional preinitiation complex assembly [goid 45899] [evidence IDA]	A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Ahre; Ah; Ahh; In	Ahre; Ah; Ahh; In
Mus musculus	RefSeq	ILMN_220255	ILMN_220255	LAG3	NM_008479.1	NM_008479.1		16768	6678653	NM_008479.1	Lag3	NP_032505.1	ILMN_2719811	000130608	S	1796	TGGGATTCAGCCATTTCCGGCTCAGAGGAAGATAGAGGAGCTGGAGCGAG	6	-	124854534-124854583	6qF2	Mus musculus lymphocyte-activation gene 3 (Lag3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45085] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity [goid 45954] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity [goid 45954] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell activation [goid 50868] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IDA]; Interacting selectively with major histocompatibility complex class II molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42289] [evidence IDA]; Interacting selectively with major histocompatibility complex class II molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42289] [evidence ISO]	CD223; Ly66; LAG-3	CD223; Ly66; LAG-3
Mus musculus	RefSeq	ILMN_216641	ILMN_216641	TIMM10	NM_013899.1	NM_013899.1		30059	7305574	NM_013899.1	Timm10	NP_038927.1	ILMN_1227235	006110068	S	357	CAGAGCTGTCAATGCAGGATGAGGAGCTGATGAAGAGGGTACAGCAGAGC	2	+	84670083-84670132	2qD	Mus musculus translocase of inner mitochondrial membrane 10 homolog (yeast) (Timm10), mRNA.	Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Timm13a; Tim13	Timm13a; Tim13
Mus musculus	RefSeq	ILMN_211581	ILMN_211581	NDUFB5	NM_025316.2	NM_025316.2		66046	27754143	NM_025316.2	Ndufb5	NP_079592.2	ILMN_2617335	004900538	S	604	GTCCAAGAACAGTGTGTCCCTCTAGTGGGAAGAAATGAATAAATACTCTG	3	+	32650086-32650135	3qA3	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5 (Ndufb5), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		SGDH; 0610007D05Rik; AU015782	SGDH; 0610007D05Rik; AU015782
Mus musculus	MEEBO	ILMN_184446	ILMN_184446	5830410F13RIK	scl0074745.1_247						5830410F13Rik		ILMN_2418697	007200136	S	2	CGGAACAAGCCAGAAGAGTTTTCCAAACCTATGATCCGGAAGGTAAGCAT										
Mus musculus	Riken	ILMN_205441	ILMN_205441	E330022G21RIK	ri|E330022G21|PX00212K18|AK054398|2977					AK054398	E330022G21Rik		ILMN_1256848	000940136	S	2674	GATCACCCACAGCTCACAGATCTCCCATAGTCTTTCCCAGGGAGGTTCAG										
Mus musculus	MEEBO	ILMN_191469	ILMN_191469	9629553_3793	9629553_3793						9629553_3793		ILMN_1235209	005310576	S	9	GTTAAACTGTTTCTCCTTTTGATCTCTGCAATAAAACATACTTGTGGGGG										
Mus musculus	RefSeq	ILMN_213880	ILMN_213880	ECE2	NM_025462.2	NM_025462.2		107522	120953155	NM_025462.2	Ece2	NP_079738.2	ILMN_2944301	000840170	S	648	TTACATCATGCATAAGGGCAGAGCGCTCAGTGTGTCCCAGCTGGCCCTGG	16	+	20618606-20618655	16qB1	Mus musculus endothelin converting enzyme 2 (Ece2), transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	6330509A19Rik; 1810009K13Rik; MGC144386; MGC144385; 9630025D12Rik; BB127715	6330509A19Rik; 1810009K13Rik; MGC144386; MGC144385; 9630025D12Rik; BB127715
Mus musculus	RefSeq	ILMN_208813	ILMN_311749	LOC100047856	XM_001479297.1	XM_001479297.1		100047856	149251846	XM_001479297.1	LOC100047856	XP_001479347.1	ILMN_2589785	002810280	S	1711	TTCGAAAGGCGTGCATGCAGAAATGGCCGAGGACATGCAGGTTTGGGTGG					PREDICTED: Mus musculus similar to calponin 3, acidic (LOC100047856), mRNA.					
Mus musculus	RefSeq	ILMN_211274	ILMN_249534	DHRS13	NM_183286.2	NM_183286.2		70451	117647266	NM_183286.2	Dhrs13	NP_899109.2	ILMN_2770270	000020228	S	1534	GGCAACTTTCTAGCTAGGTAGTGAATTTACCCCCATTTTTATGGAGGCGG	11	+	77851156-77851205	11qB5	Mus musculus dehydrogenase/reductase (SDR family) member 13 (Dhrs13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP23-43J1.3; MGC141618; 2610209N15Rik	RP23-43J1.3; MGC141618; 2610209N15Rik
Mus musculus	MEEBO	ILMN_220016	ILMN_220016	LOC384417	IGKV5-37_AJ235963_Ig_kappa_variable_5-37_4	XM_357635.1			38084364	XM_357635.1	LOC384417		ILMN_1217760	000070709	S	20	CCTTGGACTTCTGCTTTTCTGGATTTCAGCCTCCACAGGTGACATCCTGC										
Mus musculus	RefSeq	ILMN_217958	ILMN_217958	IGFBP6	NM_008344.2	NM_008344.2		16012	142363898	NM_008344.2	Igfbp6	NP_032370.1	ILMN_2689790	007380603	S	704	ACTGAGGTCTTCCGAGGCGGAGCACGTGGGCTCTATGTGCCAAACTGTGA	15	+	101978579-101978628	15qF3	Mus musculus insulin-like growth factor binding protein 6 (Igfbp6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	IGFBP-6	IGFBP-6
Mus musculus	RefSeq	ILMN_219487	ILMN_219487	SH3KBP1	NM_021389.4	NM_021389.4		58194	133892923	NM_021389.4	Sh3kbp1	NP_067364.2	ILMN_2736682	006770053	S	1543	CGCTTGCGCACAGAGGAATAGACGTGTCAAAGAAGACTTCCAAGACTGTT	X	+	156399764-156399813	XqF4	Mus musculus SH3-domain kinase binding protein 1 (Sh3kbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ruk; AI447724; Seta; 1200007H22Rik; 5830464D22Rik; 1700125L08Rik	Ruk; AI447724; Seta; 1200007H22Rik; 5830464D22Rik; 1700125L08Rik
Mus musculus	RefSeq	ILMN_219487	ILMN_219487	SH3KBP1	NM_021389.4	NM_021389.4		58194	133892923	NM_021389.4	Sh3kbp1	NP_067364.2	ILMN_2709478	002900129	S	1796	CCAGGCTGCTATCGAGGAGCTTAAGATGCAAGTCCGTGAGCTGAGGACCA	X	+	156404337-156404386	XqF4	Mus musculus SH3-domain kinase binding protein 1 (Sh3kbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ruk; AI447724; Seta; 1200007H22Rik; 5830464D22Rik; 1700125L08Rik	Ruk; AI447724; Seta; 1200007H22Rik; 5830464D22Rik; 1700125L08Rik
Mus musculus	RefSeq	ILMN_223611	ILMN_223611	PGK2	NM_031190.1	NM_031190.1		18663	13654248	NM_031190.1	Pgk2	NP_112467.1	ILMN_2766484	004920021	S	1295	CCTGTTTCCTGCGCACAGGACCAGAACCAACTCAACCTAACCTATATCTC	17	-	40344156-40344205	17qB2	Mus musculus phosphoglycerate kinase 2 (Pgk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate [goid 4618] [evidence IEA]	Pgk-2; Tcp-2	Pgk-2; Tcp-2
Mus musculus	RefSeq	ILMN_186953	ILMN_242864	IRF2BP2	XM_001002526.2	XM_001002526.2		270110	149259345	XM_001002526.2	Irf2bp2	XP_001002526.2	ILMN_1244180	003940402	S	3157	CCTGATTTCCACACCACCCTGACAACTACTTCTACAGCTGGAACCACCGG				8qE2	PREDICTED: Mus musculus interferon regulatory factor 2 binding protein 2 (Irf2bp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISO]		
Mus musculus	RefSeq	ILMN_186953	ILMN_242864	IRF2BP2	XM_001002526.2	XM_001002526.2		270110	149259345	XM_001002526.2	Irf2bp2	XP_001002526.2	ILMN_2452255	000730240	S	4467	AAGGGGCCGTAGTTTGAGATTAAGGGTGGACTTCAGAAGGCTTGAAGCTA				8qE2	PREDICTED: Mus musculus interferon regulatory factor 2 binding protein 2 (Irf2bp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISO]		
Mus musculus	RefSeq	ILMN_186953	ILMN_242864	IRF2BP2	XM_001002526.2	XM_001002526.2		270110	149259345	XM_001002526.2	Irf2bp2	XP_001002526.2	ILMN_1239801	004730164	S	2250	CCTCGCCGGAGATGTGAAAGTGAAGAAGGAGAGAGACTCGTGACTTTCTG				8qE2	PREDICTED: Mus musculus interferon regulatory factor 2 binding protein 2 (Irf2bp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISO]		
Mus musculus	RefSeq	ILMN_212705	ILMN_212705	1110038F14RIK	NM_054099.2	NM_054099.2		117171	31982592	NM_054099.2	1110038F14Rik	NP_473440.1	ILMN_2629375	006130577	S	503	AAAACCCCCTTGCCCCGGAAGAGACAGCTGATGCGCTCCTTGTTTGGGGA	15	+	76780015-76780064	15qD3	Mus musculus RIKEN cDNA 1110038F14 gene (1110038F14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212705	ILMN_212705	1110038F14RIK	NM_054099.2	NM_054099.2		117171	31982592	NM_054099.2	1110038F14Rik	NP_473440.1	ILMN_2863437	007550192	S	965	GCTGCTGATGATAAGGAACTGTGGGGAAGTTGTGGACACAGTGGGCTCAC	15	+	76781035-76781084	15qD3	Mus musculus RIKEN cDNA 1110038F14 gene (1110038F14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210167	ILMN_210167	ATP1B2	NM_013415.5	NM_013415.5		11932	146134451	NM_013415.5	Atp1b2	NP_038201.1	ILMN_2602902	005670328	S	2668	GCGAAAGAGCCCCCTGCTCCAAGTTTTCGTCCATCAGAGCAGCATATTCC				11qB3	Mus musculus ATPase, Na+/K+ transporting, beta 2 polypeptide (Atp1b2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]	Atpb-2; Amog	Atpb-2; Amog
Mus musculus	RefSeq	ILMN_201381	ILMN_201381	LOC385068	XM_358030.1	XM_358030.1			38093423	XM_358030.1	LOC385068		ILMN_1224842	004070767	S	158	CCTACCGTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGAT										
Mus musculus	RefSeq	ILMN_221766	ILMN_221766	PAX1	NM_008780.1	NM_008780.1		18503	6679208	NM_008780.1	Pax1	NP_032806.1	ILMN_2816956	004050709	S	2332	TCTGGTTTGCAAAGAATTGGGGTGGGCAAAAACCCAGGAACCCAGAAGGC	2	+	147200544-147200593	2qG2	Mus musculus paired box gene 1 (Pax1), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell [goid 43367] [evidence IMP]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell [goid 43374] [evidence IMP]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	wt; hunchback; undulated; Pax-1; hbs; un	wt; hunchback; undulated; Pax-1; hbs; un
Mus musculus	RefSeq	ILMN_239772	ILMN_239772	0610007P14RIK	NM_021446.1	NM_021446.1		58520	10946821	NM_021446.1	0610007P14Rik	NP_067421.1	ILMN_2808939	001230730	S	963	GGGCACAGGGCTGCTTCAAGGTCCTGAGCACATAGACTGGGCTCCTTTCT	12	-	86704730-86704779	12qD2	Mus musculus RIKEN cDNA 0610007P14 gene (0610007P14Rik), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]		AU019315; C77855; 1190004E09Rik; ORF11	AU019315; C77855; 1190004E09Rik; ORF11
Mus musculus	RefSeq	ILMN_199336	ILMN_227891	LOC673203	XM_001004945.1	XM_001004945.1		673203	94418779	XM_001004945.1	LOC673203	XP_001004945.1	ILMN_1241097	005900537	S	74	CCCTGAAATGGCTCTTTGCTGTTTGTACAGCTGTCATGGATGTATTGAGG					PREDICTED: Mus musculus similar to RIKEN cDNA 5031410I06 (LOC673203), mRNA.					
Mus musculus	RefSeq	ILMN_189446	ILMN_238707	BC046331	NM_177673.2	NM_177673.2		230967	31343602	NM_177673.2	BC046331	NP_808341.1	ILMN_1240038	006270619	S	3200	CCGCCTCTCATGGTCCTGTCTGCCAGGTTGTCACACCATATATAGCAACA	4	+	153381257-153381306	4qE2	Mus musculus cDNA sequence BC046331 (BC046331), mRNA.			Interacting selectively with glutamate, the anion of 2-aminopentanedioic acid [goid 16595] [evidence ISA]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence ISA]; Interacting selectively with thienylcyclohexylpiperidine [goid 16596] [evidence ISA]	mKIAA0562; A930027E11; MGC54921; RP23-254N4.3; AI115523	mKIAA0562; A930027E11; MGC54921; RP23-254N4.3; AI115523
Mus musculus	Riken	ILMN_203930	ILMN_203930	A130066N16RIK	ri|A130066N16|PX00124B09|AK037951|3800					AK037951	A130066N16Rik		ILMN_2561072	004280491	S	3624	CTGCTGCGTCACACGATAGATACACTTATGCAAAACAGAATTCTCAGCTC										
Mus musculus	Riken	ILMN_203490	ILMN_203490	B330002M01RIK	ri|B330002M01|PX00070O07|AK046514|4001					AK046514	B330002M01Rik		ILMN_2557698	002190014	S	3931	GTGAGTTCCAGGCCAGCTTGGTCTACTTAGAGTTTCAGGTCAGCCAAGAC										
Mus musculus	RefSeq	ILMN_185067	ILMN_185067	TRPV3	NM_145099.1	NM_145099.1		246788	21492637	NM_145099.1	Trpv3	NP_659567.1	ILMN_2817797	005560730	S	2224	GTGCAAAGTAGCAGATGAGGACTTCCGGCTGTGTCTGCGGATCAACGAGG	11	+	73110005-73110043:73110230-73110240	11qB4	Mus musculus transient receptor potential cation channel, subfamily V, member 3 (Trpv3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	AI644701; MGC124325; Nh; VRL3; 1110036I10Rik; MGC124324	AI644701; MGC124325; Nh; VRL3; 1110036I10Rik; MGC124324
Mus musculus	Riken	ILMN_204444	ILMN_204444	A730075L14RIK	ri|A730075L14|PX00152G11|AK043246|1249					AK043246	A730075L14Rik		ILMN_1235515	007040059	S	1113	GGCAGAGAATGTCCCCCTAAAAGGTTGTCCCTGAAGGAGTTCTGCTAGTC										
Mus musculus	RefSeq	ILMN_208771	ILMN_208771	TIMM22	NM_019818.3	NM_019818.3		56322	141802246	NM_019818.3	Timm22	NP_062792.2	ILMN_2589359	004120386	S	2535	ACATGAGCGCCAGTACAAGAAATGCTGCCATCACAGCTACCTTGGCACAG	11	+	76229559-76229608	11qB5	Mus musculus translocase of inner mitochondrial membrane 22 homolog (yeast) (Timm22), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tim22; 2610511O07Rik	Tim22; 2610511O07Rik
Mus musculus	MEEBO	ILMN_213936	ILMN_213936	GTF2I	scl25948.44_208	XM_289699.2			38081671	XM_289699.2	Gtf2i		ILMN_2642462	005130343	S	3710	AGCTCTCAGCAGTTAGGCACGTGAGGGCACGGTTCTCGGTAGTCACCACA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209066	ILMN_244442	LTK	NM_206941.1	NM_206941.1		17005	45935376	NM_206941.1	Ltk	NP_996824.1	ILMN_1219860	004010475	S	2223	GCCCAGACCCTCTTGGGGAAGGTCCTAGGCTACTTTCAGTCTTTGGTCTT	2	-	119577206-119577255	2qE5	Mus musculus leukocyte tyrosine kinase (Ltk), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [evidence IEA]		
Mus musculus	Riken	ILMN_201928	ILMN_201928	5430411J08RIK	ri|5430411J08|PX00022E10|AK017296|825					AK017296	5430411J08Rik		ILMN_1225057	007040382	S	596	GGCCAGGAGGCCGTAGATAGGACACATGCAAACACAGCAGCTAAGGGTCA										
Mus musculus	RefSeq	ILMN_213467	ILMN_213467	RFNG	NM_009053.2	NM_009053.2		19719	54262150	NM_009053.2	Rfng	NP_033079.1	ILMN_1257829	000150725	S	1157	TCTGGAAAATGAGACAACCGGGCTGTGCGTGCCGAGACCGTCCAGGAAGA	11	-	120642970-120643019	11qE2	Mus musculus RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase (Rfng), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: transfers a beta-D-GlcNAc residue from UDP-D-GlcNAc to the fucose residue of a fucosylated protein acceptor [goid 33829] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC90122	MGC90122
Mus musculus	RefSeq	ILMN_186718	ILMN_252780	DMPK	NM_032418.1	NM_032418.1		13400	14192944	NM_032418.1	Dmpk	NP_115794.1	ILMN_1229944	005360093	S	1533	AAACCGAGACCTGGAGGCGCATGTTCGGCAGCTACAGGAACGGATGGAGA	7	+	19677312-19677361	7qA3	Mus musculus dystrophia myotonica-protein kinase (Dmpk), mRNA.		Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process, involved in skeletal muscle contraction, that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP). Excitatory postsynaptic potential (EPSP) is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 14853] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Dm15; DM	Dm15; DM
Mus musculus	RefSeq	ILMN_220763	ILMN_220763	GP5	NM_008148.3	NM_008148.3		14729	142369301	NM_008148.3	Gp5	NP_032174.2	ILMN_1236762	003310400	S	2106	GGAACACCGGCTTAAAACGAACCCTAGGTCCAAGAGATGAAGGCTCTTCC	16	-	30307812-30307861	16qB2	Mus musculus glycoprotein 5 (platelet) (Gp5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GPV	GPV
Mus musculus	RefSeq	ILMN_251837	ILMN_251837	QRICH2	NM_001033267.1	NM_001033267.1		217341	85701773	NM_001033267.1	Qrich2	NP_001028439.1	ILMN_3058793	000430328	I	1460	GATCCGAGAGCTGCTGCACACCCAGTGCCTCAGCCACCCATGCTACAAAC	11	-	116260705-116260707:116261043-116261089	11qE2	Mus musculus glutamine rich 2 (Qrich2), mRNA.				Gm66	Gm66
Mus musculus	RefSeq	ILMN_251837	ILMN_251837	QRICH2	NM_001033267.1	NM_001033267.1		217341	85701773	NM_001033267.1	Qrich2	NP_001028439.1	ILMN_3136019	005090070	A	1970	CTCTGAGGGGCGTCTCCTGCAGTCGAATGTGAGCCATTCATCCATCCCTA	11	-	116257557-116257606	11qE2	Mus musculus glutamine rich 2 (Qrich2), mRNA.				Gm66	Gm66
Mus musculus	RefSeq	ILMN_207256	ILMN_321027	LOC100043898	XM_001481183.1	XM_001481183.1		100043898	149255462	XM_001481183.1	LOC100043898	XP_001481233.1	ILMN_1254443	003520435	S	1636	CTGGCGAGAGTGCAAGTTAATGCAGACGTTGTGGAAGGCAGTGTGAAGAC	6	+	139584208-139584257	6qG2	PREDICTED: Mus musculus similar to Phosphoinositide 3-Kinase-C2gamma, transcript variant 2 (LOC100043898), mRNA.					
Mus musculus	RefSeq	ILMN_212051	ILMN_212051	ZFP595	NM_177622.3	NM_177622.3		218314	110815841	NM_177622.3	Zfp595	NP_808290.1	ILMN_2622200	007380066	S	3114	TGAAGGACTTGCAGATTCTGCCAAGAGCTGGGATTTCTCATTGTCAAACA	13	-	67414679-67414728	13qB3	Mus musculus zin finger protein 595 (Zfp595), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rslcan23; A230042K10Rik	Rslcan23; A230042K10Rik
Mus musculus	RefSeq	ILMN_219093	ILMN_219093	STX6	NM_021433.3	NM_021433.3		58244	126517496	NM_021433.3	Stx6	NP_067408.1	ILMN_2704177	003840202	S	1539	GGGTGTTTTTGTGGCAGGGATAAGCAACAGGAAGTAGTGAAATCCCTTGG	1	+	157049727-157049776	1qG3	Mus musculus syntaxin 6 (Stx6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles [goid 48193] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence IMP]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310039E05Rik; AA437559; AI845861; AI415714; 2410005I16Rik	2310039E05Rik; AA437559; AI845861; AI415714; 2410005I16Rik
Mus musculus	RefSeq	ILMN_219093	ILMN_219093	STX6	NM_021433.3	NM_021433.3		58244	126517496	NM_021433.3	Stx6	NP_067408.1	ILMN_1230058	004210092	S	809	GAGTTGGAGAGCACTCAGTCTCGACTGGACAACGTGATGAAGAAACTTGC	1	+	157044493-157044542	1qG3	Mus musculus syntaxin 6 (Stx6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles [goid 48193] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence IMP]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310039E05Rik; AA437559; AI845861; AI415714; 2410005I16Rik	2310039E05Rik; AA437559; AI845861; AI415714; 2410005I16Rik
Mus musculus	RefSeq	ILMN_197487	ILMN_261830	LOC634128	XM_921604.2	XM_921604.2		634128	94369281	XM_921604.2	LOC634128	XP_926697.1	ILMN_1256425	002320731	S	369	GGATGACAGAACAGGAGCTCATCCAGTCGCTCAGGTGCTCGGGTCTATGG					PREDICTED: Mus musculus hypothetical LOC634128 (LOC634128), mRNA.					
Mus musculus	RefSeq	ILMN_209589	ILMN_209589	CDC6	NM_011799.2	NM_011799.2		23834	71061472	NM_011799.2	Cdc6	NP_035929.1	ILMN_3155217	006100576	A	4206	CCGCTGCCCTTGTGGGAGCAGAGGCTGATGTATGTTTGTCAGCAAAGTCT	11	+	98784854-98784903	11qD	Mus musculus cell division cycle 6 homolog (S. cerevisiae) (Cdc6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	CDC18L	CDC18L
Mus musculus	RefSeq	ILMN_209589	ILMN_209589	CDC6	NM_011799.2	NM_011799.2		23834	71061472	NM_011799.2	Cdc6	NP_035929.1	ILMN_1230340	006020435	S	225	CCGAAAAAGAAGCTATCTAATACCCTGAAGAAACCCAATTCCCGGGATTG	11	+	98770006-98770055	11qD	Mus musculus cell division cycle 6 homolog (S. cerevisiae) (Cdc6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	CDC18L	CDC18L
Mus musculus	RefSeq	ILMN_209589	ILMN_209589	CDC6	NM_011799.2	NM_011799.2		23834	71061472	NM_011799.2	Cdc6	NP_035929.1	ILMN_2597255	002030026	S	2266	GCCTACGAGTATATACGGACTTGTGTTGGAGAGTGTGTGTATGTATTACC	11	+	98782914-98782963	11qD	Mus musculus cell division cycle 6 homolog (S. cerevisiae) (Cdc6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	CDC18L	CDC18L
Mus musculus	RefSeq	ILMN_209589	ILMN_209589	CDC6	NM_011799.2	NM_011799.2		23834	71061472	NM_011799.2	Cdc6	NP_035929.1	ILMN_3076228	003800377	I	30	TGCCCTTGCCCAGGACTTGGGAGAGCCTAAAGGTGACGGTCTGGAACCAA	11	+	98769494-98769543	11qD	Mus musculus cell division cycle 6 homolog (S. cerevisiae) (Cdc6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	CDC18L	CDC18L
Mus musculus	RefSeq	ILMN_195165	ILMN_233401	1110015M06RIK	XM_126879.7	XM_126879.7		68511	149262904	XM_126879.7	1110015M06Rik	XP_126879.5	ILMN_1244259	002350647	S	397	CTGGAAGTCAAGGAGGACCCAGAGGTGAAGGTGGAGGTGCCAGTCGATCA	12	-	29209540-29209589	12qA2	PREDICTED: Mus musculus RIKEN cDNA 1110015M06 gene (1110015M06Rik), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]			
Mus musculus	RefSeq	ILMN_213031	ILMN_213031	DLEU7	NM_173419.1	NM_173419.1		239133	27735011	NM_173419.1	Dleu7	NP_775595.1	ILMN_1226662	000130672	S	772	GTCTGACCAAGAGCATCTGTAGCCTACAGCATGATAGCATGTAGTATGTA	14	-	62895560-62895609	14qD1	Mus musculus deleted in lymphocytic leukemia, 7 (Dleu7), mRNA.				MGC47306; BC038059	MGC47306; BC038059
Mus musculus	RefSeq	ILMN_213031	ILMN_213031	DLEU7	NM_173419.1	NM_173419.1		239133	27735011	NM_173419.1	Dleu7	NP_775595.1	ILMN_2985079	006560022	S	1225	CACATACTGCTCTGCCCATTTAAAATGATAATGAACTATGGGGTACCAAG	14	-	62895107-62895156	14qD1	Mus musculus deleted in lymphocytic leukemia, 7 (Dleu7), mRNA.				MGC47306; BC038059	MGC47306; BC038059
Mus musculus	RefSeq	ILMN_221901	ILMN_221901	HAL	NM_010401.3	NM_010401.3		15109	31981709	NM_010401.3	Hal	NP_034531.1	ILMN_2984332	005420577	S	2385	AGCACTGGTGTGTTGATGGAGAGAGAGTCTCAGGAACTGCCTGTAATGTG	10	+	92979115-92979164	10qC2	Mus musculus histidine ammonia lyase (Hal), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IDA]; The chemical reactions and pathways involving histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6547] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: L-histidine = urocanate + NH3 [goid 4397] [evidence IDA]; Catalysis of the ligation of ammonia (NH3) to another substance via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16211] [evidence IEA]	his; Hsd; histidase	his; Hsd; histidase
Mus musculus	RefSeq	ILMN_221901	ILMN_221901	HAL	NM_010401.3	NM_010401.3		15109	31981709	NM_010401.3	Hal	NP_034531.1	ILMN_1241298	004210291	S	2442	CATCTCTTTTCAAACATACTCTGGATAGGCCATGGCAGCAATGCAGTGGC	10	+	92979172-92979221	10qC2	Mus musculus histidine ammonia lyase (Hal), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IDA]; The chemical reactions and pathways involving histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6547] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: L-histidine = urocanate + NH3 [goid 4397] [evidence IDA]; Catalysis of the ligation of ammonia (NH3) to another substance via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16211] [evidence IEA]	his; Hsd; histidase	his; Hsd; histidase
Mus musculus	RefSeq	ILMN_209547	ILMN_209547	LASP1	NM_010688.4	NM_010688.4		16796	146134419	NM_010688.4	Lasp1	NP_034818.1	ILMN_2596851	002370128	S	405	GGCAAAGGTTTCAGCGTGGTGGCAGACACGCCTGAGCTGCAGAGAATCAA				11qD	Mus musculus LIM and SH3 protein 1 (Lasp1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	SH3P6; AA408629; Def-4	SH3P6; AA408629; Def-4
Mus musculus	RefSeq	ILMN_187977	ILMN_242305	TTC1	NM_133795.1	NM_133795.1		66827	20452461	NM_133795.1	Ttc1	NP_598556.1	ILMN_2464381	004850487	S	1083	GAGGCGCCTTCTTGCTCTTGTTTTATGATCAGGGTGGAATGTGCCTCCTG	11	-	43543807-43543856	11qB1.1	Mus musculus tetratricopeptide repeat domain 1 (Ttc1), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4833412C19Rik; C79328; TPR1	4833412C19Rik; C79328; TPR1
Mus musculus	RefSeq	ILMN_241701	ILMN_241701	CPSF1	NM_053193.1	NM_053193.1		94230	16751834	NM_053193.1	Cpsf1	NP_444423.1	ILMN_3139668	004730026	A	4116	GCTCCTGCTGCCCATGCAAGAAAAGACATACCGACGCTTGCTGATGCTGC	15	-	76428021-76428070	15qD3	Mus musculus cleavage and polyadenylation specific factor 1 (Cpsf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_241701	ILMN_241701	CPSF1	NM_053193.1	NM_053193.1		94230	16751834	NM_053193.1	Cpsf1	NP_444423.1	ILMN_3062133	006060360	I	3505	GATGTGATTGAAGTGGTGCCTGAGCCTGGGCAGCCCCTGACCAAGAACAA	15	-	76428577-76428619:76428736-76428742	15qD3	Mus musculus cleavage and polyadenylation specific factor 1 (Cpsf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_218716	ILMN_218716	A530046M15	scl45046.5.1_20				51767548	XM_488663	A530046M15		ILMN_2699340	005810093	S	1177	TTAGGTCCCTTGCTCACACGTTCTCCATATGAGCTTCACATCAGGGTGAC										
Mus musculus	RefSeq	ILMN_211703	ILMN_211703	PDGFB	NM_011057.3	NM_011057.3		18591	56118300	NM_011057.3	Pdgfb	NP_035187.2	ILMN_2726543	007320500	S	388	AGGCAGAGGAACACGCCTTTAGCGGGCGAGTGAAGACGAACCATCGGCTG	15	-	79844801-79844850	15qE1	Mus musculus platelet derived growth factor, B polypeptide (Pdgfb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IGI]; The orderly movement of cells from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate [goid 6929] [evidence IDA]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence ISO]	PDGF-B; Sis	PDGF-B; Sis
Mus musculus	MEEBO	ILMN_193440	ILMN_193440	BMF	scl18819.7_87				30172541	NM_138313	Bmf		ILMN_2497190	004290215	S	15	ACCCTGGTTGGACCTAGAGGGATACAGGGTGGAGCCACAGTCATTTCAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_222614	ILMN_222614	4930452B06RIK	NM_028934.2	NM_028934.2		74430	40538826	NM_028934.2	4930452B06Rik	NP_083210.2	ILMN_2752300	000290379	S	2469	CTTTGAATTTGTTCTTAGTTGTTCATTCCAGTCCTCTAAGTCTCATTTCG	14	-	9263868-9263917	14qA1	Mus musculus RIKEN cDNA 4930452B06 gene (4930452B06Rik), mRNA.				AI854000; 4933406L09Rik	AI854000; 4933406L09Rik
Mus musculus	Riken	ILMN_204162	ILMN_204162	CRP	ri|C730043I02|PX00087L21|AK050392|1895					AK050392	Crp		ILMN_1215829	003990544	S	1687	GTGATACCTGCCTGAAATCCAAGTACTTAGGAGGCAGAAGCAGGAGGATC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212885	ILMN_212885	POSTN	NM_015784.2	NM_015784.2		50706	118131080	NM_015784.2	Postn	NP_056599.1	ILMN_1216882	005670414	S	2323	GGCGATGGTCACTTATTTGAAGATGAGGAGATTAAAAGACTGCTTCAGGG	3	+	54189625-54189674	3qC	Mus musculus periostin, osteoblast specific factor (Postn), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	Periostin; peri; AI747096; Osf2; PN; OSF-2	Periostin; peri; AI747096; Osf2; PN; OSF-2
Mus musculus	RefSeq	ILMN_252720	ILMN_252720	PRRX1	NM_175686.3	NM_175686.3		18933	70909355	NM_175686.3	Prrx1	NP_783617.2	ILMN_3057018	007160164	I	1623	CCCTCCCAAGATGTTGTTTACACGAGGGGCTTCATAACGGATTCTAACGG	1	-	165184121-165184124:165184125-165184170	1qH2.1	Mus musculus paired related homeobox 1 (Prrx1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IGI]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Prx1; mHox; Pmx1; AA755424; AI385634; A230024N07Rik; K-2; AI843499	Prx1; mHox; Pmx1; AA755424; AI385634; A230024N07Rik; K-2; AI843499
Mus musculus	RefSeq	ILMN_201796	ILMN_252720	PRRX1	NM_175686.3	NM_175686.3		18933	70909355	NM_175686.3	Prrx1	NP_783617.2	ILMN_1227686	003460041	S	2432	GCTCTAGGTTATGATGTCACCGTTAACCCTACCCCTTACCCAACCCAAAC	1	-	165177732-165177781	1qH2.1	Mus musculus paired related homeobox 1 (Prrx1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IGI]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Prx1; mHox; Pmx1; AA755424; AI385634; A230024N07Rik; K-2; AI843499	Prx1; mHox; Pmx1; AA755424; AI385634; A230024N07Rik; K-2; AI843499
Mus musculus	RefSeq	ILMN_211302	ILMN_252720	PRRX1	NM_175686.3	NM_175686.3		18933	70909355	NM_175686.3	Prrx1	NP_783617.2	ILMN_2678094	007330767	S	1508	CTCAAGTCCTACTCAGGAGACGTGACTGCTGTGGAGCAACCCATCGTACC	1	-	165187948-165187997	1qH2.1	Mus musculus paired related homeobox 1 (Prrx1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IGI]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Prx1; mHox; Pmx1; AA755424; AI385634; A230024N07Rik; K-2; AI843499	Prx1; mHox; Pmx1; AA755424; AI385634; A230024N07Rik; K-2; AI843499
Mus musculus	RefSeq	ILMN_252720	ILMN_252720	PRRX1	NM_175686.3	NM_175686.3		18933	70909355	NM_175686.3	Prrx1	NP_783617.2	ILMN_3134079	000540148	A	1134	TAGACCTGGAGGAGGCCGGGGACATGGTGGCGGCACAAGCAGACGAAAGT	1	-	165242598-165242647	1qH2.1	Mus musculus paired related homeobox 1 (Prrx1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IGI]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Prx1; mHox; Pmx1; AA755424; AI385634; A230024N07Rik; K-2; AI843499	Prx1; mHox; Pmx1; AA755424; AI385634; A230024N07Rik; K-2; AI843499
Mus musculus	RefSeq	ILMN_200880	ILMN_200880	LOC382246	XM_356362.1	XM_356362.1			38086794	XM_356362.1	LOC382246		ILMN_2540329	006940541	S	977	GGGCTCCTGACCAAGACTCCTCTAAGCCCTTGTTTCTACTCACTGGCATC										
Mus musculus	MEEBO	ILMN_210210	ILMN_210210	6030465E24RIK	scl18751.13.1_28				51706357	XM_358346	6030465E24Rik		ILMN_1232171	001510544	S	3924	CGGACGCCCGTCGTTTGCCTTTGGCACCTTTCTGGTCCAGGAGTTGATCA										
Mus musculus	MEEBO	ILMN_210210	ILMN_210210	6030465E24RIK	scl18751.13.1_28				51706357	XM_358346	6030465E24Rik		ILMN_1250937	003610612	S	2704	GCACTTTATTCTGGACACTTCCAGGAAAATGCACAGACGCAGGCTTTCCC										
Mus musculus	MEEBO	ILMN_210210	ILMN_210210	6030465E24RIK	scl18751.13.1_28				51706357	XM_358346	6030465E24Rik		ILMN_1238356	006980360	S	648	GCCTCCTCACTGGCATCGGGCGCTACAATGAGATGACGTACATATTTGAC										
Mus musculus	MEEBO	ILMN_214650	ILMN_214650	4933434M16RIK	scl40759.2.1_262	NM_027720.1			21312941	NM_027720.1	4933434M16Rik		ILMN_2650349	004670521	S	1809	TGGAAAAGCTGAGGGTTATAAAGGTTCACTACTTCCTATCTGACCAGGAC										
Mus musculus	RefSeq	ILMN_208678	ILMN_208678	SSTR2	NM_009217.2	NM_009217.2		20606	110665702	NM_009217.2	Sstr2	NP_033243.2	ILMN_3106619	003610301	A	843	TGTGGCCATCAGTCCCACCCCAGCCCTGAAAGGCATGTTTGACTTTGTGG	11	+	113486413-113486462	11qE2	Mus musculus somatostatin receptor 2 (Sstr2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [evidence IDA]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [evidence IMP]	Smstr2; SSTR-2; Smstr-2; sst2	Smstr2; SSTR-2; Smstr-2; sst2
Mus musculus	RefSeq	ILMN_217213	ILMN_217213	ZC3H12D	NM_172785.2	NM_172785.2		237256	142349143	NM_172785.2	Zc3h12d	NP_766373.1	ILMN_2680398	006510142	S	4018	GAGAGACATAGATGGGCTATCTCTAGTTGCATAACTGTTACCATGCTCCA	10	+	7590120-7590169	10qA1	Mus musculus zinc finger CCCH type containing 12D (Zc3h12d), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D730019B10Rik	D730019B10Rik
Mus musculus	Riken	ILMN_202584	ILMN_202584	4632413K17RIK	ri|4632413K17|PX00012B15|AK014574|3465					AK014574	4632413K17Rik		ILMN_1236470	004120110	S	3202	GCACACTGGGGGCAAACCTATACCCACTTCACTCAGGAGGCCAATGCTGG										
Mus musculus	RefSeq	ILMN_196686	ILMN_196686	D430038H04RIK	XM_194446.2	XM_194446.2			38090255	XM_194446.2	D430038H04Rik		ILMN_2525400	004220358	S	1485	GATGTCAGCCCGCTGTGGCTTTGACGATTCTGAGGTAGCCATGAGTGACT										
Mus musculus	RefSeq	ILMN_196686	ILMN_196686	D430038H04RIK	XM_194446.2	XM_194446.2			38090255	XM_194446.2	D430038H04Rik		ILMN_1259384	001170767	S	1672	CAAGGACAGGAACAAACTGCTAATCGGGGCACATTCTGGAAGACGCAAGG										
Mus musculus	RefSeq	ILMN_221343	ILMN_221343	CD1D1	NM_007639.2	NM_007639.2		12479	144227231	NM_007639.2	Cd1d1	NP_031665.1	ILMN_2734212	002490577	S	1362	GAACTAGAAAGCATACTTCCTGCCCAAACAGACGCTCTGAGGTTAGTTGG	3	-	86800189-86800238	3qF1	Mus musculus CD1d1 antigen (Cd1d1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-4 [goid 45404] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-4 [goid 45404] [evidence IMP]; The process by which an antigen-presenting cell expresses lipid antigen of exogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family [goid 48007] [evidence IDA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of natural killer T cell activation [goid 51135] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation [goid 51138] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an endogenous cellular lipid antigen [goid 30883] [evidence IDA]	Cd1a; AI747460; Ly-38; Cd1d; CD1.1	Cd1a; AI747460; Ly-38; Cd1d; CD1.1
Mus musculus	RefSeq	ILMN_223915	ILMN_260318	ELA2	NM_015779.2	NM_015779.2		50701	114052443	NM_015779.2	Ela2	NP_056594.2	ILMN_1221700	006040601	S	542	GACAGTGGTGACTAACATGTGCCGCCGTCGTGTGAACGTATGCACTCTGG	10	+	79350466-79350515	10qC1	Mus musculus elastase 2, neutrophil (Ela2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein during the chemical reactions and pathways resulting in the breakdown of a protein by individual cells [goid 51603] [evidence ISO]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	NE; F430011M15Rik	NE; F430011M15Rik
Mus musculus	MEEBO	ILMN_214204	ILMN_214204	NDRG2	scl45598.20_218				7305304	NM_013864	Ndrg2		ILMN_2771991	002630543	S	1836	CTGTCAGCGTGCACCTAAAGTGGGACTAAGGGAAAGAGCTTAGGTCCGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]			
Mus musculus	RefSeq	ILMN_220582	ILMN_220582	SNCB	NM_033610.2	NM_033610.2		104069	20589946	NM_033610.2	Sncb	NP_291088.1	ILMN_2724044	004780152	S	1048	CCCTCCCTCAGCCCGCTCGGTCCGAGCGCGGGCGTCGTTTGTTGTGATTG	13	-	54860319-54860368	13qB1	Mus musculus synuclein, beta (Sncb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]		betaSYN; AI838531	betaSYN; AI838531
Mus musculus	RefSeq	ILMN_219145	ILMN_330495	1700052K11RIK	XR_035285.1	XR_035285.1		73431	149262462	XR_035285.1	1700052K11Rik		ILMN_1219084	000670646	S	1389	GGAGTGCACTGTGGCTCCTCAAGTCTGCACAGTGGGAAAACAAAGACAGT	11	-	105041391-105041440	11qE1	PREDICTED: Mus musculus RIKEN cDNA 1700052K11 gene (1700052K11Rik), misc RNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214162	ILMN_214162	AMPH	NM_175007.1	NM_175007.1		218038	41281851	NM_175007.1	Amph	NP_778172.1	ILMN_2842843	005690563	S	2756	CGCATTGCTCTTATTTGTCGGCATTACAGCTGCAGTTTTGCCTTGGGGCA	13	+	19242345-19242394	13qA2	Mus musculus amphiphysin (Amph), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	Invagination of the axonal plasma membrane creating a membrane-bounded vesicle. Without this process the presynaptic terminal would swell up due to fusion of vesicle membranes during neurotransmitter release. The vesicles created may subsequently be used for neurotransmitter storage/release [goid 48488] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC49429	MGC49429
Mus musculus	RefSeq	ILMN_214162	ILMN_214162	AMPH	NM_175007.1	NM_175007.1		218038	41281851	NM_175007.1	Amph	NP_778172.1	ILMN_2728607	004480523	S	1327	AACTGAGCAGGCTCTACCTACAGAGCCCCAAGCCGAAGAGCCTCCTGCCA	13	+	19216899-19216948	13qA2	Mus musculus amphiphysin (Amph), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	Invagination of the axonal plasma membrane creating a membrane-bounded vesicle. Without this process the presynaptic terminal would swell up due to fusion of vesicle membranes during neurotransmitter release. The vesicles created may subsequently be used for neurotransmitter storage/release [goid 48488] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC49429	MGC49429
Mus musculus	RefSeq	ILMN_214162	ILMN_214162	AMPH	NM_175007.1	NM_175007.1		218038	41281851	NM_175007.1	Amph	NP_778172.1	ILMN_1245012	003140181	S	1325	TGAAACTGAGCAGGCTCTACCTACAGAGCCCCAAGCCGAAGAGCCTCCTG	13	+	19216897-19216946	13qA2	Mus musculus amphiphysin (Amph), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	Invagination of the axonal plasma membrane creating a membrane-bounded vesicle. Without this process the presynaptic terminal would swell up due to fusion of vesicle membranes during neurotransmitter release. The vesicles created may subsequently be used for neurotransmitter storage/release [goid 48488] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC49429	MGC49429
Mus musculus	RefSeq	ILMN_215704	ILMN_234310	CHD7	NM_001081417.1	NM_001081417.1		320790	124487248	NM_001081417.1	Chd7	NP_001074886.1	ILMN_1215908	001510041	S	2151	TTGGTAAAGATGACTTCCCTGGTGGGGTTGAAAACCAAGAACTGCGCAGG	4	+	8712667-8712716	4qA1	Mus musculus chromodomain helicase DNA binding protein 7 (Chd7), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the female genitalia over time, from formation to the mature structure [goid 30540] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity) [goid 43584] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process by which the anatomical structures of the ear are generated and organized. Morphogenesis pertains to the creation of form. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 42471] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	Edy; WBE1; Mt; Cycn; Cyn; Lda; Dz; Whi; RP23-464N23.1; Todo; A730019I05Rik; Obt; Flo	Edy; WBE1; Mt; Cycn; Cyn; Lda; Dz; Whi; RP23-464N23.1; Todo; A730019I05Rik; Obt; Flo
Mus musculus	RefSeq	ILMN_211521	ILMN_211521	PCGF5	NM_029508.3	NM_029508.3		76073	146141128	NM_029508.3	Pcgf5	NP_083784.1	ILMN_1243593	004150682	S	1236	GCCGTGTCTGCTTTCTCAGTGTTCCGCTTGCCTGTTGCAAGATTGTTCTA				19qC2	Mus musculus polycomb group ring finger 5 (Pcgf5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5830406C17Rik; AI324127; 9530023M17Rik; 0610009F02Rik; 1110054A01Rik; 5830443C21Rik	5830406C17Rik; AI324127; 9530023M17Rik; 0610009F02Rik; 1110054A01Rik; 5830443C21Rik
Mus musculus	Riken	ILMN_203148	ILMN_203148	6720407D17RIK	ri|6720407D17|PX00059A07|AK032708|2690					AK032708	6720407D17Rik		ILMN_1220918	003370181	S	2226	AGGGATGCTTTTCTGTCATATCAGTGGGGAGATGTGCCAGGTTGGCTTGA										
Mus musculus	RefSeq	ILMN_212107	ILMN_236596	KCNQ2	NM_001006668.1	NM_001006668.1		16536	54873643	NM_001006668.1	Kcnq2	NP_001006669.1	ILMN_2622817	001340592	S	2608	TGATGTGCACCCTAGCCATTTTGTACGTGCCCTTGGGCCACAGCGACTGG	2	-	180810582-180810631	2qH4	Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	HNSPC; KQT2	HNSPC; KQT2
Mus musculus	RefSeq	ILMN_218855	ILMN_323255	B230317F23RIK	XR_035255.1	XR_035255.1		320383	149258773	XR_035255.1	B230317F23Rik		ILMN_2701046	004220400	S	2304	TTAAACAGACAAGGCTGTCTTTGGGGAGCTAAAATATGCTGCCCGCCCTG	8	+	63464499-63464548	8qB3.1	PREDICTED: Mus musculus RIKEN cDNA B230317F23 gene (B230317F23Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_199128	ILMN_258283	FAT2	NM_001029988.2	NM_001029988.2		245827	125630307	NM_001029988.2	Fat2	NP_001025159.1	ILMN_1220455	004280168	S	12715	AAAACAAGCGGGCACCCCTCCCACCCCGTTACAGCAACCAGAACCTGGAA	11	-	55065770-55065819	11qB1.3	Mus musculus FAT tumor suppressor homolog 2 (Drosophila) (Fat2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Gm523; Fath2; mKIAA0811	Gm523; Fath2; mKIAA0811
Mus musculus	RefSeq	ILMN_258283	ILMN_258283	FAT2	NM_001029988.2	NM_001029988.2		245827	125630307	NM_001029988.2	Fat2	NP_001025159.1	ILMN_2936911	004280273	S	9861	GAGACAAATCCCAAGTACTTCCTGTCCATTGAATGCAGTCGGAAGAGCTC	11	-	55082888-55082937	11qB1.3	Mus musculus FAT tumor suppressor homolog 2 (Drosophila) (Fat2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Gm523; Fath2; mKIAA0811	Gm523; Fath2; mKIAA0811
Mus musculus	Riken	ILMN_207248	ILMN_207248	F830022O08RIK	ri|F830022O08|PL00006A06|AK089798|1563					AK089798	F830022O08Rik		ILMN_2586158	002070301	S	1034	ACACACACACACACGCCACAGAACACAAGCTGGAGGCTAGAGGACTACTC										
Mus musculus	RefSeq	ILMN_233803	ILMN_233803	LGALS6	NM_010707.1	NM_010707.1		16857	6754533	NM_010707.1	Lgals6	NP_034837.1	ILMN_2954098	001050414	S	388	GGTCGTGGTGAATGGAAGTCCCTTCTATGAATACGGGCACCGGTTACCCG	7	+	28544788-28544791:28546376-28546421		Mus musculus lectin, galactose binding, soluble 6 (Lgals6), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	galectin-6	galectin-6
Mus musculus	RefSeq	ILMN_210140	ILMN_210140	TINF2	NM_145705.2	NM_145705.2		28113	26892290	NM_145705.2	Tinf2	NP_663751.2	ILMN_2602616	001980066	S	1572	AGCACTTGAAAATTAAATATTGATTTGTTTCACTATTGATGGGAAGAAGG	14	-	56297945-56297994	14qC3	Mus musculus Terf1 (TRF1)-interacting nuclear factor 2 (Tinf2), mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tin2; D14Wsu146e; AW552114	Tin2; D14Wsu146e; AW552114
Mus musculus	Riken	ILMN_206234	ILMN_206234	D130092D14RIK	ri|D130092D14|PX00187K05|AK084100|1779					AK084100	D130092D14Rik		ILMN_2578592	004760368	S	1376	GACAGATGCAGGTTCTCACAGCCAACCATTGGACTAAGCCTGGAGACCCC										
Mus musculus	RefSeq	ILMN_214176	ILMN_214176	EFHA1	NM_028643.3	NM_028643.3		68514	146141162	NM_028643.3	Efha1	NP_082919.1	ILMN_2645165	002630021	S	2097	ATAGCAAGTTTTCTTAAGCTACGGGATCTTGGGTTGTGGGAAATATGGCA				14qC3	Mus musculus EF hand domain family A1 (Efha1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	4833427E09Rik; Smhs2; AU041871; 1110008L20Rik	4833427E09Rik; Smhs2; AU041871; 1110008L20Rik
Mus musculus	RefSeq	ILMN_222034	ILMN_222034	LAMA4	NM_010681.1	NM_010681.1		16775	46275825	NM_010681.1	Lama4	NP_034811.1	ILMN_2816565	003460672	S	5807	CCTAACACTGAAATAAACATAGTAGTGGGGGGTCGGGAGGGTCAGAGGCC	10	+	38799499-38799548	10qB1	Mus musculus laminin, alpha 4 (Lama4), mRNA.	A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	MGC141567	MGC141567
Mus musculus	RefSeq	ILMN_215960	ILMN_215960	CRY2	NM_009963.3	NM_009963.3		12953	46048394	NM_009963.3	Cry2	NP_034093.1	ILMN_2665681	000010324	S	3374	GGGTGAAGAAACAGGGCACCTGTGATGTCCATGTTTAGAGTTCTGGGGTG	2	-	92244340-92244389	2qE1	Mus musculus cryptochrome 2 (photolyase-like) (Cry2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IMP]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IPI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA [goid 3913] [evidence IEA]	D130054K12Rik; AV006279	D130054K12Rik; AV006279
Mus musculus	RefSeq	ILMN_188831	ILMN_230696	COX15	NM_144874.3	NM_144874.3		226139	142384028	NM_144874.3	Cox15	NP_659123.2	ILMN_1235186	002120446	S	2518	GCCAGAGACCACTCGGAACCGGTTTATAGTCACCCCAAGCACATGGCAAC	19	-	43809955-43810004	19qC3	Mus musculus COX15 homolog, cytochrome c oxidase assembly protein (yeast) (Cox15), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2900026G05Rik; MGC18952	2900026G05Rik; MGC18952
Mus musculus	RefSeq	ILMN_192034	ILMN_245299	TMEM177	NM_175106.3	NM_175106.3		66343	62990170	NM_175106.3	Tmem177	NP_780315.1	ILMN_1224142	006660603	S	1421	GAGATTGTGAGCCTGAGGGCCTGGTAGAACGCAGCATAAATAAACAGGGC	1	-	121806297-121806346	1qE2.3	Mus musculus transmembrane protein 177 (Tmem177), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2300008B03Rik	2300008B03Rik
Mus musculus	RefSeq	ILMN_192034	ILMN_245299	TMEM177	NM_175106.3	NM_175106.3		66343	62990170	NM_175106.3	Tmem177	NP_780315.1	ILMN_1214391	005960039	S	2879	CCAAGCACAGTTGTTAGAATAAGAGCAAGACCAGTGCAGAGTCCACACTG	1	-	121804839-121804888	1qE2.3	Mus musculus transmembrane protein 177 (Tmem177), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2300008B03Rik	2300008B03Rik
Mus musculus	RefSeq	ILMN_213217	ILMN_315716	LOC100048508	XM_001480806.1	XM_001480806.1		100048508	149262232	XM_001480806.1	LOC100048508	XP_001480856.1	ILMN_1232274	002140296	S	73	GGGCCTCAACAAGGGCCACAAGGTGACGAAAAACGTCAGTAAGCCGAGAC					PREDICTED: Mus musculus similar to Rpl36 protein, transcript variant 1 (LOC100048508), mRNA.					
Mus musculus	Riken	ILMN_203639	ILMN_203639	SLC39A1	ri|9330134D20|PX00105B10|AK033987|3927					AK033987	Slc39a1		ILMN_1238359	005890703	S	3577	GGGCACGTAAATGTCCTGTCTGAACTCTACTGGTTAGAAGCTGGTGTCAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]		
Mus musculus	RefSeq	ILMN_244865	ILMN_244865	ARHGAP15	NM_001025377.1	NM_001025377.1		76117	70780376	NM_001025377.1	Arhgap15	NP_001020548.1	ILMN_3162594	004150189	I	1509	TCCACTGACGAAATCAGTATCAGGACTTAGAGCAGCGAGGTTGAATGTCC	2	+	43746986-43747035	2qB	Mus musculus Rho GTPase activating protein 15 (Arhgap15), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence ISO]	5830480G12Rik	5830480G12Rik
Mus musculus	RefSeq	ILMN_222663	ILMN_222663	FAM125A	NM_028617.2	NM_028617.2		73711	27753999	NM_028617.2	Fam125a	NP_082893.1	ILMN_2753109	005390021	S	1010	TCTGTGTCTAGAGGCCACATATGCACCAGCAGTAAACGCTACCTGGGACC	8	+	74071873-74071922	8qB3.3	Mus musculus family with sequence similarity 125, member A (Fam125a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	MGC99951	MGC99951
Mus musculus	RefSeq	ILMN_214974	ILMN_214974	COPS5	NM_013715.1	NM_013715.1		26754	7304970	NM_013715.1	Cops5	NP_038743.1	ILMN_1249524	002970563	S	884	CCACAGGCCAGGTGTTTGATTTGTCTGAGAAGTTAGAGCAGTCGGAAGCC	1	-	10017264-10017313	1qA2	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana) (Cops5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	Mov34; Jab1; AI303502; CSN5; Sgn5	Mov34; Jab1; AI303502; CSN5; Sgn5
Mus musculus	RefSeq	ILMN_214974	ILMN_214974	COPS5	NM_013715.1	NM_013715.1		26754	7304970	NM_013715.1	Cops5	NP_038743.1	ILMN_2662124	000070731	S	886	CACAGGCCAGGTGTTTGATTTGTCTGAGAAGTTAGAGCAGTCGGAAGCCC	1	-	10017262-10017311	1qA2	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana) (Cops5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	Mov34; Jab1; AI303502; CSN5; Sgn5	Mov34; Jab1; AI303502; CSN5; Sgn5
Mus musculus	RefSeq	ILMN_214172	ILMN_214172	ST7L	NM_153091.2	NM_153091.2		229681	40254198	NM_153091.2	St7l	NP_694731.1	ILMN_2645090	002060424	S	1728	GCTAACCCGCACGAGCAGCGGAAGACACTTGTAGACGGCAAGAGCTGATG	3	+	104729560-104729609	3qF2.2	Mus musculus suppression of tumorigenicity 7-like (St7l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	St7r; MGC130399	St7r; MGC130399
Mus musculus	RefSeq	ILMN_214172	ILMN_214172	ST7L	NM_153091.2	NM_153091.2		229681	40254198	NM_153091.2	St7l	NP_694731.1	ILMN_2780519	004640468	S	1726	GTGCTAACCCGCACGAGCAGCGGAAGACACTTGTAGACGGCAAGAGCTGA	3	+	104729558-104729607	3qF2.2	Mus musculus suppression of tumorigenicity 7-like (St7l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	St7r; MGC130399	St7r; MGC130399
Mus musculus	RefSeq	ILMN_217616	ILMN_217616	SLC38A9	NM_178746.3	NM_178746.3		268706	32129222	NM_178746.3	Slc38a9	NP_848861.1	ILMN_2831268	003780402	S	2911	GTGTGGCCTCCAGGAGCCAACACCCTCTACCTGCTTCTAGAGCAGAAAGA	13	+	113522968-113523017	13qD2.2	Mus musculus solute carrier family 38, member 9 (Slc38a9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	6720411P22Rik; A730092C09; 9430067K09Rik	6720411P22Rik; A730092C09; 9430067K09Rik
Mus musculus	RefSeq	ILMN_217616	ILMN_217616	SLC38A9	NM_178746.3	NM_178746.3		268706	32129222	NM_178746.3	Slc38a9	NP_848861.1	ILMN_1230743	001030343	S	1849	GAACCTTGGCAACGGTTCTGCATAAAAGAACTTGAAAATGCTGTCATTGC	13	+	113521906-113521955	13qD2.2	Mus musculus solute carrier family 38, member 9 (Slc38a9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	6720411P22Rik; A730092C09; 9430067K09Rik	6720411P22Rik; A730092C09; 9430067K09Rik
Mus musculus	RefSeq	ILMN_217616	ILMN_217616	SLC38A9	NM_178746.3	NM_178746.3		268706	32129222	NM_178746.3	Slc38a9	NP_848861.1	ILMN_1242435	002480349	S	2772	GTTGTCCTCGATTCTTGCCCTTGAGAACTGCATGGACTGTCATGAAGCCC	13	+	113522829-113522878	13qD2.2	Mus musculus solute carrier family 38, member 9 (Slc38a9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	6720411P22Rik; A730092C09; 9430067K09Rik	6720411P22Rik; A730092C09; 9430067K09Rik
Mus musculus	RefSeq	ILMN_248374	ILMN_248374	IL17D	NM_145837.1	NM_145837.1		239114	22003885	NM_145837.1	Il17d	NP_665836.1	ILMN_2792502	004670468	S	1503	GCTTACTAAGGTGATAATGAGTGCTCCGGATCTGGGCACCTAAGGTCTCC				14qC3	Mus musculus interleukin 17D (Il17d), mRNA.				AI462269; IL-17D; Il27a	AI462269; IL-17D; Il27a
Mus musculus	MEEBO	ILMN_185892	ILMN_185892	ASB1	scl17645.6_17				51705209	XM_149066	Asb1		ILMN_2525077	006220240	S	1058	GAGCTGCTCTTTCAGAGGCCTTGTTCCCAGAGGCTCACAGCTGTCTGCAA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]			
Mus musculus	MEEBO	ILMN_211225	ILMN_211225	AP2B1	scl0001360.1_1	NM_027915.1			21313639	NM_027915.1	Ap2b1		ILMN_1252951	002490092	S	2336	TGACAGACTTTGCCATCCAGTTTAACAAGAATAGCTTCGGTGTCATCCCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence ISO]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence ISO]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224267	ILMN_245166	TCEA2	NM_009326.2	NM_009326.2		21400	133892334	NM_009326.2	Tcea2	NP_033352.1	ILMN_2777609	004760114	S	1015	CTGGCCATGGCTAACACTGTCCTTCCTGCAATGTTCTTGGTGGACACAGC	2	+	181422608-181422657	2qH4	Mus musculus transcription elongation factor A (SII), 2 (Tcea2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	SII-T1; Tceat; AI326274; S-II-T1	SII-T1; Tceat; AI326274; S-II-T1
Mus musculus	MEEBO	ILMN_224116	ILMN_224116	SPAG7	scl39991.5_43				27369785	NM_172561	Spag7		ILMN_2775088	004070291	S	491	GCCAGCGACTACAAGGACAAGTATAGCCATCTTATTGGCAAAGGAGCAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193447	ILMN_193447	2310038D14RIK	scl078495.2_180						2310038D14Rik		ILMN_2497293	004060647	S	19	GTCTCGTTTCATTGTTCTGTGCCCTTGTCAAATCTGCTTCACAGCTCATT										
Mus musculus	RefSeq	ILMN_224216	ILMN_243918	OLFR297	NM_146618.2	NM_146618.2		258611	116063543	NM_146618.2	Olfr297	NP_666829.2	ILMN_1252914	007150382	S	718	GTCCCTCACATCATTGTAGCATATTTGTTTCTTTGTTCTGGTGCCTATGC	7	+	93675986-93676035	7qD3	Mus musculus olfactory receptor 297 (Olfr297), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR220-3	MOR220-3
Mus musculus	RefSeq	ILMN_190809	ILMN_228952	LOC637852	XM_913648.3	XM_913648.3		637852	149257086	XM_913648.3	LOC637852	XP_918741.1	ILMN_2473466	003520224	S	495	GGTTACCTCTCCACCCTTCATTGATCAAGATACTCATGCTGAACATGGTC					PREDICTED: Mus musculus similar to calcium-sensing receptor related protein 2 (LOC637852), mRNA.					
Mus musculus	RefSeq	ILMN_222135	ILMN_222135	KEG1	NM_029550.1	NM_029550.1		64697	19482165	NM_029550.1	Keg1	NP_083826.1	ILMN_2860915	002480592	S	1508	AAATGTGCTTGCAGCCAAGCCTGGAAACCTGAATGTGATTCCTGGGACCC	19	+	12786760-12786809	19qA	Mus musculus kidney expressed gene 1 (Keg1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine [goid 47961] [evidence IEA]	GS4059; 0610008P16Rik; AI316519	GS4059; 0610008P16Rik; AI316519
Mus musculus	RefSeq	ILMN_230689	ILMN_230689	TYMS-PS	NR_000040.1	NR_000040.1		22172	24586682	NR_000040.1	Tyms-ps		ILMN_2921303	003830735	S	773	GCTATCTTGCCAGCTTTACCAGAGGTCAGGAGATATGGGTCTGGGTGTGC	10	+	87430188-87430237	10qC1	Mus musculus thymidylate synthase, pseudogene (Tyms-ps), non-coding RNA.					
Mus musculus	MEEBO	ILMN_192174	ILMN_192174	SCL0001916.1_1504	scl0001916.1_1504	AK039260.1			26087043	AK039260.1	scl0001916.1_1504		ILMN_1237812	002900008	S	1	GCCCCTCCCCCATGACGGATTATTCTCAGCTAAAAGGATCAGGTGTTCCT										
Mus musculus	RefSeq	ILMN_185957	ILMN_219695	ITIH5	NM_172471.2	NM_172471.2		209378	124286821	NM_172471.2	Itih5	NP_766059.1	ILMN_2431433	007560037	S	7584	GGGAAACTGAAATCAGGGCTACTGAAAATAAAACTTGATCATTCTAACCG	2	+	10177812-10177861	2qA1	Mus musculus inter-alpha (globulin) inhibitor H5 (Itih5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	E130106B02; 5430408M01Rik; 4631408O11Rik	E130106B02; 5430408M01Rik; 4631408O11Rik
Mus musculus	RefSeq	ILMN_219695	ILMN_219695	ITIH5	NM_172471.2	NM_172471.2		209378	124286821	NM_172471.2	Itih5	NP_766059.1	ILMN_1248909	002190762	S	445	CGGGGTGAAATTACACAGAAAGATAAGAAAAGCAGTGAGAGCGTAAAAGA	2	+	10108604-10108653	2qA1	Mus musculus inter-alpha (globulin) inhibitor H5 (Itih5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	E130106B02; 5430408M01Rik; 4631408O11Rik	E130106B02; 5430408M01Rik; 4631408O11Rik
Mus musculus	RefSeq	ILMN_219695	ILMN_219695	ITIH5	NM_172471.2	NM_172471.2		209378	124286821	NM_172471.2	Itih5	NP_766059.1	ILMN_2752371	006380470	S	2584	AGAGACCACCTGGGCTTCTACATCGCCAACAGCAGAGGTCTCTCCGACAA	2	+	10171027-10171076	2qA1	Mus musculus inter-alpha (globulin) inhibitor H5 (Itih5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	E130106B02; 5430408M01Rik; 4631408O11Rik	E130106B02; 5430408M01Rik; 4631408O11Rik
Mus musculus	RefSeq	ILMN_208928	ILMN_258501	1190002A17RIK	NM_001033874.2	NM_001033874.2		68870	152963552	NM_001033874.2	1190002A17Rik	NP_001029046.2	ILMN_2590894	004670386	S	1332	CCTGTTCTACAGGAACTCTGGGGATCTGGAGCAGTACTACGATCGAGCCA				2qA3	Mus musculus RIKEN cDNA 1190002A17 gene (1190002A17Rik), mRNA.		The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]	RP23-362N19.5; MGC118311; MGC130365	RP23-362N19.5; MGC118311; MGC130365
Mus musculus	RefSeq	ILMN_212489	ILMN_212489	ITIH4	NM_018746.2	NM_018746.2		16427	142382967	NM_018746.2	Itih4	NP_061216.1	ILMN_2627022	001740326	S	2263	CTTGCCGCTTCCGGGATCCAGTGTGGACCAGCTCTGTGTGGATATCTTAC	14	+	31711191-31711240	14qB	Mus musculus inter alpha-trypsin inhibitor, heavy chain 4 (Itih4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]	Itih-4	Itih-4
Mus musculus	RefSeq	ILMN_212489	ILMN_212489	ITIH4	NM_018746.2	NM_018746.2		16427	142382967	NM_018746.2	Itih4	NP_061216.1	ILMN_2718431	002230465	S	2899	CACCTTATGCCAACAGGGACGCCTGTGAGGCCGAGACCTTGATGGGAAGA	14	+	31714944-31714993	14qB	Mus musculus inter alpha-trypsin inhibitor, heavy chain 4 (Itih4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]	Itih-4	Itih-4
Mus musculus	RefSeq	ILMN_227671	ILMN_227671	TMEM136	NM_001034863.1	NM_001034863.1		235300	85702200	NM_001034863.1	Tmem136	NP_001030035.1	ILMN_2809571	007650086	S	3325	CAACCCAGGTAAATGAAGGGCAGACTAGTGTGCGATGTGTCCCCAGACAC	9	-	42859773-42859822	9qA5.1	Mus musculus transmembrane protein 136 (Tmem136), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm184; AA396355	Gm184; AA396355
Mus musculus	RefSeq	ILMN_208799	ILMN_208799	EDNRB	NM_007904.3	NM_007904.3		13618	141802494	NM_007904.3	Ednrb	NP_031930.1	ILMN_2589640	004210196	S	3910	CTCTGGTCACCTAAAGTGGCAGCTTGTGTCGTTGCTAACTTCTTGTTGAG	14	-	104213872-104213921	14qE2.3	Mus musculus endothelin receptor type B (Ednrb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IDA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IGI]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The process whose specific outcome is the progression of the posterior midgut over time, from its formation to the mature structure [goid 7497] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with endothelin to initiate a change in cell activity [goid 4962] [evidence IMP]; A G-protein coupled receptor that binds all endothelin molecules with approximately equal affinity [goid 1600] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ET-B; Sox10m1; ET>B<; AU022549; ETb; s	ET-B; Sox10m1; ET>B<; AU022549; ETb; s
Mus musculus	RefSeq	ILMN_220355	ILMN_311924	4922501C03RIK	NM_199316.2	NM_199316.2		382090	147905038	NM_199316.2	4922501C03Rik	NP_955020.2	ILMN_1218378	004260064	S	4280	GGAAGATCAAGCAGATGGAGATGAGGCATAGGCAGAGAGAGCAGGAGCTC				9qE3.1	Mus musculus RIKEN cDNA 4922501C03 gene (4922501C03Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA1009; mKIAA1009	KIAA1009; mKIAA1009
Mus musculus	RefSeq	ILMN_219851	ILMN_311924	4922501C03RIK	NM_199316.2	NM_199316.2		382090	147905038	NM_199316.2	4922501C03Rik	NP_955020.2	ILMN_2714415	001300543	S	1857	GAGCTCAGGCTACGGCAAACCCAGTTCACCACTCCAGTTATTTTCAGCCC				9qE3.1	Mus musculus RIKEN cDNA 4922501C03 gene (4922501C03Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA1009; mKIAA1009	KIAA1009; mKIAA1009
Mus musculus	MEEBO	ILMN_210995	ILMN_210995	D130011D22RIK	scl0319593.2_10	NM_176957.2			31342466	NM_176957.2	D130011D22Rik		ILMN_1223640	002320148	S	438	GTCATTTGTACAGTGATGGGTTTTGAACCCAGTCCTTGGACAGTCAAGGC										
Mus musculus	MEEBO	ILMN_210995	ILMN_210995	D130011D22RIK	scl0319593.2_10	NM_176957.2			31342466	NM_176957.2	D130011D22Rik		ILMN_2636964	007400274	S	1285	GCCTAGACGTAATTGCTTATGTAAGAAATAAGCGCATCCATCCCAGCAGC										
Mus musculus	RefSeq	ILMN_250637	ILMN_250637	GNL3	NM_178846.1	NM_178846.1		30877	41281912	NM_178846.1	Gnl3	NP_849174.1	ILMN_3097726	006480408	A	1451	CCAGGGAGCTGTCACCTGAGCAATCAACAGCAGGTAAGCCATCTGACGGG	14	-	29841625-29841643:29841732-29841762	14qB	Mus musculus guanine nucleotide binding protein-like 3 (nucleolar) (Gnl3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC46970; C77032; Ns; BC037996	MGC46970; C77032; Ns; BC037996
Mus musculus	RefSeq	ILMN_223715	ILMN_223715	OLFR166	NM_147068.1	NM_147068.1		259071	22128824	NM_147068.1	Olfr166	NP_667279.1	ILMN_2971399	005810746	S	888	CCTGGGGGCCATGACAAGAGTCCTTGGTACTTTTCCTTCAACTAAACCGT	16	+	19487820-19487869	16qA3	Mus musculus olfactory receptor 166 (Olfr166), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR270-1	MOR270-1
Mus musculus	RefSeq	ILMN_223715	ILMN_223715	OLFR166	NM_147068.1	NM_147068.1		259071	22128824	NM_147068.1	Olfr166	NP_667279.1	ILMN_1249609	005720703	S	282	GGGCTGTGGAGTGCAATCCTTCTTCTTCCTGACTATGGCATGTTCTGAGG	16	+	19487214-19487263	16qA3	Mus musculus olfactory receptor 166 (Olfr166), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR270-1	MOR270-1
Mus musculus	RefSeq	ILMN_191174	ILMN_225221	A930035D04RIK	XM_994391.2	XM_994391.2		320946	149255026	XM_994391.2	A930035D04Rik	XP_999485.2	ILMN_2476795	003780315	S	2784	CTCATTGCTAGCTTCCCATGTGTGCCTTCAGGTATGGGTTGGGGTGCAGG				6qB2.3	PREDICTED: Mus musculus RIKEN cDNA A930035D04 gene (A930035D04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196808	ILMN_248561	RCC2	XM_981869.1	XM_981869.1		108911	94373936	XM_981869.1	Rcc2	XP_986963.1	ILMN_1224353	004060475	S	2769	ACTATTGCTGGACAGACGGGGGACAGTGAGGACTCTGACCCTTCCCAGCA				4qD3	PREDICTED: Mus musculus regulator of chromosome condensation 2 (Rcc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]			
Mus musculus	RefSeq	ILMN_222276	ILMN_222276	OLFR713	NM_147034.1	NM_147034.1		259036	22128876	NM_147034.1	Olfr713	NP_667245.1	ILMN_1224608	002630561	S	891	CTATAGCCTGAGAAATAATGAGGTGAAGAGTGCCCTCAGCAGGACCTTCC	7	+	114180540-114180589	7qE3	Mus musculus olfactory receptor 713 (Olfr713), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	P3; MOR263-1	P3; MOR263-1
Mus musculus	MEEBO	ILMN_188518	ILMN_188518	2410078J06RIK	scl49604.5.1_167				51770466	XM_356960	2410078J06Rik		ILMN_2524436	004060270	S	862	GGCACGTCCCTCGGAGACAAGCTGAAGTATGAAGCATATTGCCTGGCTTA										
Mus musculus	RefSeq	ILMN_213137	ILMN_213137	PRUNE	NM_173347.2	NM_173347.2		229589	40254234	NM_173347.2	Prune	NP_775482.1	ILMN_2706495	005340162	S	2725	CTGGGAGCGTTCGCGCTCTGGGTCACTGGATTGTTTCGTGTTTATGTGTG	3	-	95057961-95058010	3qF2.1	Mus musculus prune homolog (Drosophila) (Prune), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments [goid 16462] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]	Prune-M1; DRES-17; HTCD37; 9230112O05Rik; C130058A12; PRUNEM1	Prune-M1; DRES-17; HTCD37; 9230112O05Rik; C130058A12; PRUNEM1
Mus musculus	RefSeq	ILMN_213137	ILMN_213137	PRUNE	NM_173347.2	NM_173347.2		229589	40254234	NM_173347.2	Prune	NP_775482.1	ILMN_2791811	004120711	S	3015	TGACGTCTGTAGCCAATGGGAACGTGAAATATTGGTGCGATCACTGAACC	3	-	95057671-95057720	3qF2.1	Mus musculus prune homolog (Drosophila) (Prune), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments [goid 16462] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]	Prune-M1; DRES-17; HTCD37; 9230112O05Rik; C130058A12; PRUNEM1	Prune-M1; DRES-17; HTCD37; 9230112O05Rik; C130058A12; PRUNEM1
Mus musculus	RefSeq	ILMN_213137	ILMN_213137	PRUNE	NM_173347.2	NM_173347.2		229589	40254234	NM_173347.2	Prune	NP_775482.1	ILMN_1252629	004390687	S	2170	GCAGCGTCTGCCATGAAACCAGTTCACCGCTCCTCTCCATGAATTGACCT	3	-	95058516-95058565	3qF2.1	Mus musculus prune homolog (Drosophila) (Prune), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments [goid 16462] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]	Prune-M1; DRES-17; HTCD37; 9230112O05Rik; C130058A12; PRUNEM1	Prune-M1; DRES-17; HTCD37; 9230112O05Rik; C130058A12; PRUNEM1
Mus musculus	RefSeq	ILMN_213137	ILMN_213137	PRUNE	NM_173347.2	NM_173347.2		229589	40254234	NM_173347.2	Prune	NP_775482.1	ILMN_2673213	003190598	S	1161	GGACCAGAAGACAGTCTACAGACAGGGCACCAAGGTGGCAATCAGTGCAA	3	-	95063178-95063227	3qF2.1	Mus musculus prune homolog (Drosophila) (Prune), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments [goid 16462] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]	Prune-M1; DRES-17; HTCD37; 9230112O05Rik; C130058A12; PRUNEM1	Prune-M1; DRES-17; HTCD37; 9230112O05Rik; C130058A12; PRUNEM1
Mus musculus	RefSeq	ILMN_210174	ILMN_210174	4933400C05RIK	NM_177801.2	NM_177801.2		328019	31342991	NM_177801.2	4933400C05Rik	NP_808469.1	ILMN_2959341	000460300	S	824	GATGAGTCCCCCAAAAGCATGGCTCACAAATCTTGGACTCGGGAAACCAG	11	-	103024972-103025021	11qE1	Mus musculus RIKEN cDNA 4933400C05 gene (4933400C05Rik), mRNA.				VAD1.2	VAD1.2
Mus musculus	RefSeq	ILMN_190960	ILMN_317147	LOC100045542	XM_001473941.1	XM_001473941.1		100045542	149266278	XM_001473941.1	LOC100045542	XP_001473991.1	ILMN_1239716	007550050	S	4444	AGGGAATAAAAATACCTCACACCATGATCCAGCACATACAAGTCTGAGGC					PREDICTED: Mus musculus similar to FERMRhoGEF (Arhgef) and pleckstrin domain protein 1 (LOC100045542), mRNA.					
Mus musculus	RefSeq	ILMN_187477	ILMN_317147	LOC100045542	XM_001473941.1	XM_001473941.1		100045542	149266278	XM_001473941.1	LOC100045542	XP_001473991.1	ILMN_1222813	006620082	S	7257	ATGAAGCGCTCTCATCTAACCTATGTTGGGTTGTGCCACCACGTCTGTAC					PREDICTED: Mus musculus similar to FERMRhoGEF (Arhgef) and pleckstrin domain protein 1 (LOC100045542), mRNA.					
Mus musculus	RefSeq	ILMN_222006	ILMN_317147	LOC100045542	XM_001473941.1	XM_001473941.1		100045542	149266278	XM_001473941.1	LOC100045542	XP_001473991.1	ILMN_1230893	002680739	S	4192	CTGTTTGCCTGTTCTCTAGGGCAGCTGGGTCGCTGTCATTCCCTTCATGC					PREDICTED: Mus musculus similar to FERMRhoGEF (Arhgef) and pleckstrin domain protein 1 (LOC100045542), mRNA.					
Mus musculus	RefSeq	ILMN_188243	ILMN_310388	CCNYL1	NM_001097644.1	NM_001097644.1		227210	148237242	NM_001097644.1	Ccnyl1	NP_001091113.1	ILMN_2451013	006550523	S	2615	TCTCACATCTAACCTTGGGAGTCTTACCTAAAAAGCCTTTTGTGGGCCAC				1qC2	Mus musculus cyclin Y-like 1 (Ccnyl1), mRNA.				9630037P07Rik; AW554339	9630037P07Rik; AW554339
Mus musculus	RefSeq	ILMN_188243	ILMN_310388	CCNYL1	NM_001097644.1	NM_001097644.1		227210	148237242	NM_001097644.1	Ccnyl1	NP_001091113.1	ILMN_1218539	005340296	S	547	GGGAGCCATTCTTCTTGCCTCCAAGGTTTGGGATGACCAGGCTGTATGGA				1qC2	Mus musculus cyclin Y-like 1 (Ccnyl1), mRNA.				9630037P07Rik; AW554339	9630037P07Rik; AW554339
Mus musculus	RefSeq	ILMN_223027	ILMN_223027	OLFR594	NM_207143.1	NM_207143.1		258246	46369490	NM_207143.1	Olfr594	NP_997026.1	ILMN_1226190	000050747	S	638	TAGCCATCGCTCTTTCTTATGCACAGATACTCCGTGCAGTTTTCCGTCTC	7	+	110368871-110368920	7qE3	Mus musculus olfactory receptor 594 (Olfr594), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR32-10	MOR32-10
Mus musculus	RefSeq	ILMN_186885	ILMN_186885	VARS	NM_011690.2	NM_011690.2		22321	34328203	NM_011690.2	Vars	NP_035820.2	ILMN_2439341	004200543	S	3916	TTCCAGAAGATGCTGTGACCCCCCATTCCAACCCTCAGCCCCCAGTGTTC	17	+	35149525-35149574	17qB1	Mus musculus valyl-tRNA synthetase (Vars), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6438] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-tRNA(Val) [goid 4832] [evidence IEA]	Bat6; G7a; D17H6S56E; Vars2; Bat-6	Bat6; G7a; D17H6S56E; Vars2; Bat-6
Mus musculus	RefSeq	ILMN_186885	ILMN_186885	VARS	NM_011690.2	NM_011690.2		22321	34328203	NM_011690.2	Vars	NP_035820.2	ILMN_2508519	006840408	S	1750	ATTGAGACCATGCTGGGAGACGTGGCTGTAGCTGTGCACCCCAAGGATCC	17	+	35142290-35142295:35142322-35142365	17qB1	Mus musculus valyl-tRNA synthetase (Vars), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6438] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-tRNA(Val) [goid 4832] [evidence IEA]	Bat6; G7a; D17H6S56E; Vars2; Bat-6	Bat6; G7a; D17H6S56E; Vars2; Bat-6
Mus musculus	RefSeq	ILMN_186885	ILMN_186885	VARS	NM_011690.2	NM_011690.2		22321	34328203	NM_011690.2	Vars	NP_035820.2	ILMN_2928160	001580044	S	3831	GCCCCTTGAGGTCCAGGAGGCAGATGAAGCGAAGTTGCAACAGACAGAGG	17	+	35149440-35149489	17qB1	Mus musculus valyl-tRNA synthetase (Vars), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6438] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-tRNA(Val) [goid 4832] [evidence IEA]	Bat6; G7a; D17H6S56E; Vars2; Bat-6	Bat6; G7a; D17H6S56E; Vars2; Bat-6
Mus musculus	Riken	ILMN_204075	ILMN_204075	A730014O07RIK	ri|A730014O07|PX00149K16|AK042678|2503					AK042678	A730014O07Rik		ILMN_1254828	003180370	S	1973	CGGCTTGCACCGATTGCTTCTCCGTGCACTTCTGATATTTGCACAGTCAC										
Mus musculus	MEEBO	ILMN_216855	ILMN_216855	SSR4	scl54843.2_132				6678144	NM_009279	Ssr4		ILMN_2773447	001470008	S	694	CTGAGGGCAGCAACTTCAGCCGTCCATTGCTTCTTTCAATAAACAGTCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209993	ILMN_209993	FRZB	NM_011356.4	NM_011356.4		20378	146134343	NM_011356.4	Frzb	NP_035486.1	ILMN_2601155	006330181	S	2558	GGGGTGGGTAGGTTTAAGCCATTGCACATTCAAGTTGAACTAGATTAGAG				2qC3	Mus musculus frizzled-related protein (Frzb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with Wnt-protein, a secreted growth factor involved in signaling [goid 17147] [evidence IDA]	Sfrp3; frezzled; fritz; Frp; frzb-1	Sfrp3; frezzled; fritz; Frp; frzb-1
Mus musculus	MEEBO	ILMN_208678	ILMN_208678	SSTR2	scl40757.3.1_234	NM_009217.1			6678038	NM_009217.1	Sstr2		ILMN_1229577	007210048	S	1829	GGTGGACAGTTACCACAACGCTGAACCTGAAGAAAAGGACTCGCCACGTC						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [evidence IDA]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [evidence IMP]		
Mus musculus	RefSeq	ILMN_198490	ILMN_198490	LOC381243	XM_355185.1	XM_355185.1			38085804	XM_355185.1	LOC381243		ILMN_1239783	006980324	S	389	CCATCTATGGGATGTATGTAAGTACCCATGTCTTAGAGCCTTCCACTCAT										
Mus musculus	Riken	ILMN_203765	ILMN_203765	A130051J06RIK	ri|A130051J06|PX00123J15|AK037810|2620					AK037810	A130051J06Rik		ILMN_2559805	002320593	S	2231	GAGCATACTTGAGACCACCCTAGAAGTCTGGGCACTGGCAAAGGGTCAGG										
Mus musculus	RefSeq	ILMN_196357	ILMN_196357	AI987692	NM_177912.2	NM_177912.2		331063	31342689	NM_177912.2	AI987692	NP_808580.1	ILMN_3040543	001660414	I	148	GCTTCAAGGAAGAGATCTGAGGCCTGTGGAATGCTTGTCCGATGCAACCA	15	-	63665514-63665563	15qD1	Mus musculus expressed sequence AI987692 (AI987692), mRNA.				MGC130607; 9130023H10	MGC130607; 9130023H10
Mus musculus	RefSeq	ILMN_196357	ILMN_196357	AI987692	NM_177912.2	NM_177912.2		331063	31342689	NM_177912.2	AI987692	NP_808580.1	ILMN_3115255	003370373	A	1550	ATTGCACCATGCATGTTTTAGGCCAGTGGGAATAAAGATGCTATGGCTCC	15	-	63654489-63654538	15qD1	Mus musculus expressed sequence AI987692 (AI987692), mRNA.				MGC130607; 9130023H10	MGC130607; 9130023H10
Mus musculus	RefSeq	ILMN_191261	ILMN_259295	EBF1	NM_007897.2	NM_007897.2		13591	118131118	NM_007897.2	Ebf1	NP_031923.1	ILMN_2707452	003990170	S	1999	CTGCCAGAGCAGGGTGTTGGTTAAAGTTGTAACCCCCGAGTATCTGGGGG	11	+	44818428-44818477	11qB1.1	Mus musculus early B-cell factor 1 (Ebf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	9830166E18Rik; O/E-1; AW990631; Ebf; Olf-1; Olf1	9830166E18Rik; O/E-1; AW990631; Ebf; Olf-1; Olf1
Mus musculus	Riken	ILMN_204174	ILMN_204174	5-HTR2C, GPCR	ri|A730084N12|PX00152D20|AK043320|3058					AK043320	5-Htr2c, GPCR		ILMN_2562946	004220661	S	2651	GTACTGTTTCCACCGTGAGCTCCCCACTGCATGCCTTTTTGGGGTAGATC										
Mus musculus	Riken	ILMN_202451	ILMN_202451	4930528A17RIK	ri|4930528A17|PX00034A18|AK015922|1754					AK015922	4930528A17Rik		ILMN_2549714	006220768	S	1197	CTGGCCCTAGCTTTACCCACGAATTGCCAGTCTTTGCCAACCTCCCCATA										
Mus musculus	RefSeq	ILMN_219059	ILMN_219059	LRP12	NM_172814.1	NM_172814.1		239393	27370213	NM_172814.1	Lrp12	NP_766402.1	ILMN_2819951	000520184	S	3965	GTTTGAGGTCTTGTGTATCTGTCCTGTTATGCTGTCAGGAAGACCTGACG	15	-	39700726-39700775	15qB3.1	Mus musculus low density lipoprotein-related protein 12 (Lrp12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C820005L12Rik; AI848829	C820005L12Rik; AI848829
Mus musculus	RefSeq	ILMN_216380	ILMN_216380	SNUPN	NM_178374.3	NM_178374.3		66069	142372553	NM_178374.3	Snupn	NP_848461.1	ILMN_2670415	006840523	S	1166	GACCTTATTTCAGAGCATTCTTTCCAAACCCAGGTTGCCCCCTGTCTGGA	9	+	56830834-56830883	9qB	Mus musculus snurportin 1 (Snupn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	Rnut1; 0610031A09Rik; Snupn1	Rnut1; 0610031A09Rik; Snupn1
Mus musculus	RefSeq	ILMN_217750	ILMN_217750	1520401A03RIK	NM_177132.2	NM_177132.2		320309	31342876	NM_177132.2	1520401A03Rik	NP_796106.1	ILMN_3078008	003360709	I	1471	TTGGGAAAGCCCAGAAGCCAGGACTTGGGAATGGAAATGGGCAGGGAGCC	17	-	23441176-23441206:23441294-23441312	17qA3.3	Mus musculus RIKEN cDNA 1520401A03 gene (1520401A03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217750	ILMN_217750	1520401A03RIK	NM_177132.2	NM_177132.2		320309	31342876	NM_177132.2	1520401A03Rik	NP_796106.1	ILMN_3157177	007560273	A	3668	AGGCCGAAAGCTGAGGCAGGAGGACTCAGAGTTCATTGATAGACAGCGTG	17	-	23432117-23432166	17qA3.3	Mus musculus RIKEN cDNA 1520401A03 gene (1520401A03Rik), mRNA.					
Mus musculus	MEEBO	ILMN_185155	ILMN_185155	B930086A06RIK	scl21767.3_386				31343067	NM_177207	B930086A06Rik		ILMN_1253227	006590156	S	2132	CCTGGCTTGCCACTAACAAACAAGGCAGTGTCTGCAGAGTGCATACTCCC										
Mus musculus	MEEBO	ILMN_185155	ILMN_185155	B930086A06RIK	scl21767.3_386				31343067	NM_177207	B930086A06Rik		ILMN_2424640	001710719	S	18	GGAATGGGCTCACATGGAAGAGGAGAATGTTCAGTGTCTGTGGGCTTCTA										
Mus musculus	Riken	ILMN_203419	ILMN_203419	B230208M22RIK	ri|B230208M22|PX00069D07|AK045526|1152					AK045526	B230208M22Rik		ILMN_1231454	001050341	S	857	CCATCCTCAGACCCTGTGTAAGCAGCCAGGTATGGAGGCAGAAGACCCAG										
Mus musculus	RefSeq	ILMN_252844	ILMN_252844	9630025I21RIK	NM_001076791.1	NM_001076791.1		408067	115647916	NM_001076791.1	9630025I21Rik	NP_001070259.1	ILMN_2885679	003420035	S	1777	CTTCTAATTCTTTCCCACACAGGAGCGCAGCAGGGAAGCCCAAGACACGG				13qB3	Mus musculus RIKEN cDNA 9630025I21 gene (9630025I21Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rslcan16	Rslcan16
Mus musculus	RefSeq	ILMN_189807	ILMN_254185	GPR62	XM_975079.1	XM_975079.1		436090	94387624	XM_975079.1	Gpr62	XP_980173.1	ILMN_2464536	002060204	S	1517	CGGAGCAGGATTTGGGTTACACCATAGCAGGAGTAACCAGTGGAGAAGCG					PREDICTED: Mus musculus G protein-coupled receptor 62 (Gpr62), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213285	ILMN_213285	5730596K20RIK	NM_146091.2	NM_146091.2		109168	31559919	NM_146091.2	5730596K20Rik	NP_666203.2	ILMN_2936468	005700296	S	2458	GGCCTTACACCGAGGAGGCTGGCAGTTTTGTCGACATTGCTTTCTTATTT	19	+	7601873-7601922	19qA	Mus musculus RIKEN cDNA 5730596K20 gene (5730596K20Rik), mRNA.				4633402C03Rik; AI465397; MGC28761	4633402C03Rik; AI465397; MGC28761
Mus musculus	RefSeq	ILMN_210690	ILMN_210690	LY6G6C	NM_023463.3	NM_023463.3		68468	50845397	NM_023463.3	Ly6g6c	NP_075952.1	ILMN_1251725	006620008	S	888	ATTGCATGGGCCTGGCTTACCAGACCCTCTGCTTGTCCCCTTCTATCTTG	17	+	35206801-35206850	17qB1	Mus musculus lymphocyte antigen 6 complex, locus G6C (Ly6g6c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			G6c; NG24; 1110003M04Rik; AU016360; MGC144235; MGC144236	G6c; NG24; 1110003M04Rik; AU016360; MGC144235; MGC144236
Mus musculus	RefSeq	ILMN_217307	ILMN_234426	TTLL10	NM_029264.2	NM_029264.2		330010	142389110	NM_029264.2	Ttll10	NP_083540.1	ILMN_1217917	002320408	S	731	GCTAAAGTGGTGTGAGATCAAGTGCAGGGACAACTACTGCAGCTTTCGGG	4	-	155421198-155421247	4qE2	Mus musculus tubulin tyrosine ligase-like family, member 10 (Ttll10), mRNA. XM_922509 XM_990853	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Ttll5; BC042775; 4930595O22Rik; AU022799; 4833412E22Rik	Ttll5; BC042775; 4930595O22Rik; AU022799; 4833412E22Rik
Mus musculus	RefSeq	ILMN_217307	ILMN_234426	TTLL10	NM_029264.2	NM_029264.2		330010	142389110	NM_029264.2	Ttll10	NP_083540.1	ILMN_2701211	001660386	S	2064	AAATCGCGGCTGTCTGACTCGAGCGGTAGCTCCATAGCGGAGTCTGAGCC	4	-	155409139-155409188	4qE2	Mus musculus tubulin tyrosine ligase-like family, member 10 (Ttll10), mRNA. XM_922509 XM_990853	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Ttll5; BC042775; 4930595O22Rik; AU022799; 4833412E22Rik	Ttll5; BC042775; 4930595O22Rik; AU022799; 4833412E22Rik
Mus musculus	MEEBO	ILMN_224173	ILMN_224173	CALCR	scl29325.17.1_48				6680829	NM_007588	Calcr		ILMN_2776007	006770438	S	3401	GAAAACTGTATTTCAATAGCAACTGTGGACCTTGGATACTGAGAGTTGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; Any constituent part of a microtubule-based flagellum, a long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 44442] [evidence IDA]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IDA]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]; Any process that modulates the frequency, rate or extent of bone tissue loss (resorption) [goid 45124] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]	Combining with calcitonin to initiate a change in cell activity [goid 4948] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	Riken	ILMN_204000	ILMN_204000	A630039F22RIK	ri|A630039F22|PX00145N21|AK041805|709					AK041805	A630039F22Rik		ILMN_2561604	000110762	S	300	CACCTGCCGCGACCAGTGCCTGCCCGCAGGATAGCACCCAGCCGTCAGAT										
Mus musculus	Riken	ILMN_204632	ILMN_204632	C730026O12RIK	ri|C730026O12|PX00087C21|AK050208|3838					AK050208	C730026O12Rik		ILMN_2566477	001570544	S	3784	GTTGGGGTAAGACTTTAGTTGTTTTCCCCTTAGACCACATTGCATGCAGG										
Mus musculus	RefSeq	ILMN_209150	ILMN_209150	LY6A	NM_010738.2	NM_010738.2		110454	31981636	NM_010738.2	Ly6a	NP_034868.1	ILMN_1255416	001690187	S	670	GCTCATGACCCTGGAGGCACACAGCCAGCACAGTGAAGAGGCAGAATTCC	15	-	74825415-74825464	15qD3	Mus musculus lymphocyte antigen 6 complex, locus A (Ly6a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]			Ly-6A/E; Ly-6A.2; Sca-1; Sca1; TAP; Ly-6E.1	Ly-6A/E; Ly-6A.2; Sca-1; Sca1; TAP; Ly-6E.1
Mus musculus	Riken	ILMN_202562	ILMN_202562	COL4A3BP	ri|2810404O15|ZX00053C04|AK012989|2262					AK012989	Col4a3bp		ILMN_1215327	001740474	S	2056	GCAAGATCACGTATGTAGCTAATGTGAACCCAGGAGGATGGGCGCCAGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221006	ILMN_221006	SST	NM_009215.1	NM_009215.1		20604	6678034	NM_009215.1	Sst	NP_033241.1	ILMN_2729826	004670193	S	437	TTCACATCCTGTTAGCTTTAATATTGTTGTCCTAGCCAGACCTCTGATCC	16	-	23889779-23889814:23889815-23889828	16qB1	Mus musculus somatostatin (Sst), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	SOM; SRIF; SS; Smst	SOM; SRIF; SS; Smst
Mus musculus	RefSeq	ILMN_217610	ILMN_217610	C030048B08RIK	NM_172991.2	NM_172991.2		269623	31559872	NM_172991.2	C030048B08Rik	NP_766579.2	ILMN_2940358	004890129	S	2079	TTCTACACTGTCAGCATATCTGTACTTTTTCTTCTGTCAGCGGGCCACAG	5	-	3590046-3590095	5qA1	Mus musculus RIKEN cDNA C030048B08 gene (C030048B08Rik), mRNA.				AW548102	AW548102
Mus musculus	RefSeq	ILMN_217610	ILMN_217610	C030048B08RIK	NM_172991.2	NM_172991.2		269623	31559872	NM_172991.2	C030048B08Rik	NP_766579.2	ILMN_1259185	006940653	S	1289	GGTATCCCCACAGTAGATCTGCAGGACGACTCCTTGAATACAACGGCAAC	5	-	3596251-3596300	5qA1	Mus musculus RIKEN cDNA C030048B08 gene (C030048B08Rik), mRNA.				AW548102	AW548102
Mus musculus	MEEBO	ILMN_190571	ILMN_190571	4833418N17RIK	scl32454.1.2_0						4833418N17Rik		ILMN_1236519	002260753	S	4	GCACATCTTAGTGGATTCTGTGCAATGAGTTGCTGTAGCTGACAGGACAC										
Mus musculus	RefSeq	ILMN_221874	ILMN_221874	RXRA	NM_011305.3	NM_011305.3		20181	84579898	NM_011305.3	Rxra	NP_035435.1	ILMN_2741479	001070037	S	1735	GGGTGCAGTGTCCTTATGGGCCCAAAAGATGCATCACCATCCTCGCCATC	2	+	27615307-27615356	2qA3	Mus musculus retinoid X receptor alpha (Rxra), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The expansion of a cardiac muscle cell population by cell division [goid 60038] [evidence IMP]; The expansion of a cardiac muscle cell population by cell division [goid 60038] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IGI]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]	Nr2b1; RXRalpha1; 9530071D11Rik	Nr2b1; RXRalpha1; 9530071D11Rik
Mus musculus	RefSeq	ILMN_198730	ILMN_198730	LOC330630	XM_287720.1	XM_287720.1			28481583	XM_287720.1	LOC330630		ILMN_1244280	005820301	S	212	CAGAACAGAGACAACAGGGCGAGACTTAGAGCAACAGGTACAGCTCCATG										
Mus musculus	RefSeq	ILMN_230338	ILMN_230338	ZFP120	NM_181266.2	NM_181266.2		104348	91064879	NM_181266.2	Zfp120	NP_851783.2	ILMN_3065805	004120544	I	250	AAAGGCCATAATATTTCTGAAGGACATTTTCAAAATTCTAGAAGAAACGG	2	-	149945303-149945352	2qG3	Mus musculus zinc finger protein 120 (Zfp120), transcript variant 1, mRNA.				F80; AI315103; MZF31; E030042N05Rik	F80; AI315103; MZF31; E030042N05Rik
Mus musculus	RefSeq	ILMN_205124	ILMN_232527	LOC627828	XM_001004189.1	XM_001004189.1		627828	94384333	XM_001004189.1	LOC627828	XP_001004189.1	ILMN_1234035	002900753	S	1599	CCAGAGGTCTGAGTTCACTTCCCAGCTCACAGCCATCCTTAGTGGGAGCT				8qE1	PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 6 (LOC627828), mRNA.					
Mus musculus	RefSeq	ILMN_213463	ILMN_213463	BGN	NM_007542.3	NM_007542.3		12111	24475819	NM_007542.3	Bgn	NP_031568.2	ILMN_2964042	002100402	S	2277	TGGGTCCCTGATGTGGTAGGAGGTGATGGTCAGTTGCACCCAGCAAGAGG	X	+	70740130-70740135:70740002-70740045	XqA7.3	Mus musculus biglycan (Bgn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLRR1A; BG; PG-S1; PGI; DSPG1	SLRR1A; BG; PG-S1; PGI; DSPG1
Mus musculus	RefSeq	ILMN_200482	ILMN_200482	LOC381735	XM_355717.1	XM_355717.1			38082606	XM_355717.1	LOC381735		ILMN_1257217	006560220	S	483	TAACCAGGCACCCAGTCGCTGGACACCAGGCTTCCTGCAAAGGCCAGCTT										
Mus musculus	RefSeq	ILMN_221126	ILMN_221126	HDAC10	NM_199198.1	NM_199198.1		170787	40353217	NM_199198.1	Hdac10	NP_954668.1	ILMN_2731340	006510544	S	2220	GCGATTCACACGTGAAAAATAGCACACTCGGGCCCCAGCGAACCATGGCC	15	-	88953806-88953855	15qE3	Mus musculus histone deacetylase 10 (Hdac10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence ISO]	The modification of histones by removal of acetyl groups [goid 16575] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence ISO]	AW548891	AW548891
Mus musculus	RefSeq	ILMN_212049	ILMN_212049	KLHL18	NM_177771.5	NM_177771.5		270201	124517681	NM_177771.5	Klhl18	NP_808439.2	ILMN_1235016	000520431	S	4157	CTGAGCACACAAGCGAACAGAAACATTTTTATACTCCCCTGTCTGAGGGC	9	-	110328753-110328802	9qF2	Mus musculus kelch-like 18 (Drosophila) (Klhl18), mRNA.				AW545966; A930041K15; MGC36415	AW545966; A930041K15; MGC36415
Mus musculus	RefSeq	ILMN_241809	ILMN_241809	OTTMUSG00000000480	NM_001080972.1	NM_001080972.1		626299	124430497	NM_001080972.1	OTTMUSG00000000480	NP_001074441.1	ILMN_2871535	007210685	S	570	CGTCTTCCAGAGTCTCATGGGCTGGAGCAGTGGATACATCTCTTTTCACC	13	+	22336653-22336702	13qA3.1	Mus musculus predicted gene, OTTMUSG00000000480 (OTTMUSG00000000480), mRNA.					
Mus musculus	MEEBO	ILMN_210178	ILMN_210178	2310061B02RIK	scl16616.17_44				31980813	NM_027154	2310061B02Rik		ILMN_2769843	004280470	S	2081	ATCACAGAGGGACACAACTAGAAATGTAATAAAGTTTTATGTTTGGCAGG										
Mus musculus	RefSeq	ILMN_197591	ILMN_260494	EG436563	XM_489896.3	XM_489896.3		436563	82890378	XM_489896.3	EG436563	XP_489896.3	ILMN_1245785	006840204	S	998	GCACAGAGCAGCTGAAGACTCGGGCTCTCCATTTCATTGCAGTTCATGCT	3	+	93577852-93577901	3qF2.1	PREDICTED: Mus musculus predicted gene, EG436563 (EG436563), mRNA.					
Mus musculus	MEEBO	ILMN_185606	ILMN_185606	FADS3	scl53382.12_567				31542797	NM_021890	Fads3		ILMN_1234696	003870327	S	2810	ACGCGATGAGAAATAAAAAGGATGCCCTGGAAAGGCTTGCGCCAAAAGGC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water [goid 16717] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185606	ILMN_185606	FADS3	scl53382.12_567				31542797	NM_021890	Fads3		ILMN_2594672	007400682	S	2803	GCTTTCAACGCGATGAGAAATAAAAAGGATGCCCTGGAAAGGCTTGCGCC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water [goid 16717] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]		
Mus musculus	Riken	ILMN_202499	ILMN_202499	2010001F03RIK	ri|2010001F03|ZX00043D05|AK008004|494					AK008004	2010001F03Rik		ILMN_2550089	000630575	S	335	GAGAGAAGCCCTTGCCCTCTGCAGGTCCCATTGAAAGGAGAGGTTTGCTC										
Mus musculus	RefSeq	ILMN_200147	ILMN_200147	LOC385639	XM_359237.1	XM_359237.1			38080684	XM_359237.1	LOC385639		ILMN_1216371	005820435	S	61	TCGCCTCCTTGCTCCTCCCTGAAGTCCCATTTAAAGTTAAGTCTGGCTTT										
Mus musculus	MEEBO	ILMN_212362	ILMN_212362	9330158H04RIK	scl00319472.1_234				51711899	XM_489132	9330158H04Rik		ILMN_1246955	002630687	S	2977	CCTGCCTCTACTTCTGATAACTATTATTATCCTACAAGAGGGCCAATGGA										
Mus musculus	MEEBO	ILMN_212362	ILMN_212362	9330158H04RIK	scl00319472.1_234				51711899	XM_489132	9330158H04Rik		ILMN_2660943	006350373	S	168	CTGATTTGGCGGTTCTTCGGTGCAAATATGACAGCTTTCTCTCTCAGCTC										
Mus musculus	RefSeq	ILMN_201050	ILMN_201050	LOC384731	XM_357825.1	XM_357825.1			38088163	XM_357825.1	LOC384731		ILMN_1244893	005820524	S	398	GCTCTGTTTGCTTTGGCCTTTTCGTCCCCCTCTTGACATGGAGAGATGTG										
Mus musculus	MEEBO	ILMN_210670	ILMN_210670	TEX18	scl38593.1.1_236	NM_031385.1			13878212	NM_031385.1	Tex18		ILMN_1212886	002340170	S	1041	GGCACTTGTGAATCTTCTTTGATAATTGGGACACATTCGTCAATTCTGAG										
Mus musculus	Riken	ILMN_204957	ILMN_204957	D430017M14RIK	ri|D430017M14|PX00193D06|AK052425|1840					AK052425	D430017M14Rik		ILMN_1220830	004920068	S	1722	TCACCATTGAGGATGCAGAGGCAGGGGGATCTCAGAGTTAGAGGACACTC										
Mus musculus	MEEBO	ILMN_211036	ILMN_211036	LOC232067	IGKV8-27_AJ235946_Ig_kappa_variable_8-27_34	XM_132612.2			38084375	XM_132612.2	LOC232067		ILMN_2611798	002000014	S	48	GGTACCTGTGGGAACATTATGATGACACAGTCGCCATCATCTCTGGCTGT										
Mus musculus	MEEBO	ILMN_184673	ILMN_184673	C030016K15RIK	scl0077387.1_2						C030016K15Rik		ILMN_2420586	003710477	S	18	CTTAAAAGACAGTGTGTATCCACCATGTATTCTCTGTTGGTGGGGGTGCA										
Mus musculus	RefSeq	ILMN_218988	ILMN_237957	GTF2A2	NM_001039519.1	NM_001039519.1		235459	87299616	NM_001039519.1	Gtf2a2	NP_001034608.1	ILMN_2702823	007040341	S	788	GCTGGTTAGCAGGGAATTGTCAAAAATACCAGAGAAATTGAAGAGGGGCT	9	+	69870568-69870617	9qD	Mus musculus general transcription factor II A, 2 (Gtf2a2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12) [goid 5672] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	TfIIg; 12kDa	TfIIg; 12kDa
Mus musculus	RefSeq	ILMN_216713	ILMN_216713	LRRC20	NM_153542.1	NM_153542.1		216011	23956307	NM_153542.1	Lrrc20	NP_705770.1	ILMN_2978878	006130338	S	2438	CTAAATAATCCCGGGGGCTGGAGAGATGGCTCCGAGGTTAAGAGTACTGA	10	+	61044793-61044842	10qB4	Mus musculus leucine rich repeat containing 20 (Lrrc20), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC036304; MGC25719	BC036304; MGC25719
Mus musculus	RefSeq	ILMN_216713	ILMN_216713	LRRC20	NM_153542.1	NM_153542.1		216011	23956307	NM_153542.1	Lrrc20	NP_705770.1	ILMN_2674378	003840048	S	1955	CTGCTGGTATCATGGCTGTGTATCCTAAAAGAAACCTTGCCTATTCCGCT	10	+	61044310-61044359	10qB4	Mus musculus leucine rich repeat containing 20 (Lrrc20), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC036304; MGC25719	BC036304; MGC25719
Mus musculus	RefSeq	ILMN_200166	ILMN_200166	LOC385848	XM_358971.1	XM_358971.1			38080756	XM_358971.1	LOC385848		ILMN_1239202	002970661	S	125	CACGGCCATGTGGACCATCACAGAACGGGCTGCTACCACTGACTGTTGCA										
Mus musculus	RefSeq	ILMN_191493	ILMN_256111	4930519F24RIK	XM_897583.2	XM_897583.2		108970	94386346	XM_897583.2	4930519F24Rik	XP_902676.1	ILMN_2479556	002340152	S	485	TTACATGAAATAGAAGATTTTTTAATGCTGAATAAAACTGTATCCCAGGA	9	+	99934997-99935046	9qE3.3	PREDICTED: Mus musculus RIKEN cDNA 4930519F24 gene, transcript variant 2 (4930519F24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210713	ILMN_210713	ATP6V0D1	NM_013477.3	NM_013477.3		11972	141802838	NM_013477.3	Atp6v0d1	NP_038505.2	ILMN_2685365	004540215	S	1481	CCTGGGACAGTGTCCATAGGTCATCCCCAGAACCTGTGGGAAGAGTAGAG	8	-	108048456-108048505	8qD3	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit D1 (Atp6v0d1), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	Vma6; P39; Atp6d; AI267038; Ac39; VATX	Vma6; P39; Atp6d; AI267038; Ac39; VATX
Mus musculus	RefSeq	ILMN_210713	ILMN_210713	ATP6V0D1	NM_013477.3	NM_013477.3		11972	141802838	NM_013477.3	Atp6v0d1	NP_038505.2	ILMN_1258534	000770014	S	532	TTGAGCAGATGGAGGCTGTGAACATCGCACAGACACCTGCAGAGCTCTAC	8	-	108054742-108054791	8qD3	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit D1 (Atp6v0d1), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	Vma6; P39; Atp6d; AI267038; Ac39; VATX	Vma6; P39; Atp6d; AI267038; Ac39; VATX
Mus musculus	RefSeq	ILMN_210713	ILMN_210713	ATP6V0D1	NM_013477.3	NM_013477.3		11972	141802838	NM_013477.3	Atp6v0d1	NP_038505.2	ILMN_2608429	006290673	S	291	GGCAACTTCCTGGCCAATGAAGCGTCACCTCTGACGGTGTCAGTCATCGA	8	-	108063310-108063359	8qD3	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit D1 (Atp6v0d1), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	Vma6; P39; Atp6d; AI267038; Ac39; VATX	Vma6; P39; Atp6d; AI267038; Ac39; VATX
Mus musculus	Riken	ILMN_204346	ILMN_204346	B3GAT1	ri|A930026E11|PX00066H15|AK044599|2022					AK044599	B3gat1		ILMN_2564267	006480102	S	1470	GACCCCTCAGTGGAGATCTGAAACTAAAGATGCAGAGGATGCTGTGTAAG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence TAS]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]; Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 15018] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220281	ILMN_220281	ALKBH6	NM_198027.2	NM_198027.2		233065	38569507	NM_198027.2	Alkbh6	NP_932144.2	ILMN_2720092	007000424	S	716	TTGCAAGTCAGCGCTGCCCGGAGCCCACCTGGTGCGCGGCACCCGTGTCT	7	+	31099093-31099142	7qB1	Mus musculus alkB, alkylation repair homolog 6 (E. coli) (Alkbh6), mRNA.			Hydroxylase, with 2-oxoglutarate as one donor, and incorporation or reduction of one atom each of oxygen into both donors [goid 10302] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AI839550; C130099A02; Abh6	AI839550; C130099A02; Abh6
Mus musculus	RefSeq	ILMN_210159	ILMN_210159	2310016M24RIK	NM_183256.2	NM_183256.2		66379	142345368	NM_183256.2	2310016M24Rik	NP_899079.1	ILMN_1249408	001780647	S	419	AAAAGATTTTCCTGCATGTCAACCCTGGCAAGAACTAGGCCCCCATGCCT	15	+	99558292-99558341	15qF1	Mus musculus RIKEN cDNA 2310016M24 gene (2310016M24Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC106475; AA959804	MGC106475; AA959804
Mus musculus	RefSeq	ILMN_215520	ILMN_215520	LAT	NM_010689.2	NM_010689.2		16797	24475924	NM_010689.2	Lat	NP_034819.1	ILMN_2660551	006900044	S	1150	GTGTCCCCAATATTCTGTACCTTCTGATAAAGCCTGAGAATGAATCTGGT	7	-	133507376-133507425	7qF3	Mus musculus linker for activation of T cells (Lat), mRNA.	An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell [goid 43303] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence TAS]	 [goid 5057] [evidence TAS]		
Mus musculus	RefSeq	ILMN_190087	ILMN_190087	VIP	NM_011702.2	NM_011702.2		22353	142365020	NM_011702.2	Vip	NP_035832.1	ILMN_1243637	002940538	S	721	CGAAGGAAAACAACCACGTGATTACATTATGAGTTCTACATGTCTAATTC	10	-	4699683-4699732	10qA1	Mus musculus vasoactive intestinal polypeptide (Vip), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC107202	MGC107202
Mus musculus	Riken	ILMN_206472	ILMN_206472	ABCA4	ri|D430003I15|PX00193F03|AK084860|3511					AK084860	Abca4		ILMN_1253125	001690767	S	3233	TGAAGACTAACCGTGGCAGGAACTTGAGAGGCGCTTGGTTATTGACGTTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The transfer of a phospholipid from its site of synthesis to the plasma membrane [goid 6649] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [evidence IMP]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IMP]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence TAS]		
Mus musculus	RefSeq	ILMN_222734	ILMN_222734	RTKN	NM_133641.1	NM_133641.1		20166	41281637	NM_133641.1	Rtkn	NP_598396.1	ILMN_2753988	000830564	S	503	CTAAGCCAGAACTCCCTCGGTCGGTTCTGATCTCCCGTCAAGCCTCAGGA	6	+	83087606-83087655	6qC3	Mus musculus rhotekin (Rtkn), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with the GTP-bound form of the Rho protein [goid 17049] [evidence IDA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IDA]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213872	ILMN_213872	BDH2	NM_027208.1	NM_027208.1		69772	23956201	NM_027208.1	Bdh2	NP_081484.1	ILMN_2641678	000240433	S	953	CCCGAGAGTGTGACTCTTTAATAGTCTCTCGTCTCTTCTGAAGCTGTGGT	3	+	134967315-134967364	3qG3	Mus musculus 3-hydroxybutyrate dehydrogenase, type 2 (Bdh2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + NADH + H+ [goid 3858] [evidence IEA]	1810026B04Rik; Dhrs6	1810026B04Rik; Dhrs6
Mus musculus	RefSeq	ILMN_220847	ILMN_230038	BMYC	NM_023326.2	NM_023326.2		107771	83035028	NM_023326.2	Bmyc	NP_075815.2	ILMN_2776140	004560634	S	711	AGGAATCTTAAAGTATATCAATTTTCCAACATCAGCTGGACCCTTAAGTG	2	+	25563109-25563158	2qA3	Mus musculus brain expressed myelocytomatosis oncogene (Bmyc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW060705; 2900002K07Rik	AW060705; 2900002K07Rik
Mus musculus	RefSeq	ILMN_215217	ILMN_215217	WDR46	NM_020603.2	NM_020603.2		57315	31982691	NM_020603.2	Wdr46	NP_065628.1	ILMN_1256643	007320343	S	1572	CTGGCAGAGGTGGATGTGGTCACTCTGGAGCAGCAGAAGAAGGAGCGGAT	17	+	34080594-34080643	17qB1	Mus musculus WD repeat domain 46 (Wdr46), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]			C78447; C78559; 2310007I04Rik; Bing4	C78447; C78559; 2310007I04Rik; Bing4
Mus musculus	RefSeq	ILMN_215217	ILMN_215217	WDR46	NM_020603.2	NM_020603.2		57315	31982691	NM_020603.2	Wdr46	NP_065628.1	ILMN_2656894	003610202	S	1580	GGTGGATGTGGTCACTCTGGAGCAGCAGAAGAAGGAGCGGATAGAGAGAC	17	+	34080602-34080651	17qB1	Mus musculus WD repeat domain 46 (Wdr46), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]			C78447; C78559; 2310007I04Rik; Bing4	C78447; C78559; 2310007I04Rik; Bing4
Mus musculus	RefSeq	ILMN_215484	ILMN_215484	APBA3	NM_018758.1	NM_018758.1		57267	9055381	NM_018758.1	Apba3	NP_061228.1	ILMN_2660110	001400735	S	1751	TGCTGAGCGTGGTGGAGTCCGCGTTGGACACCGCATCATTGAGGTCAACG	10	+	80735615-80735664	10qC1	Mus musculus amyloid beta (A4) precursor protein-binding, family A, member 3 (Apba3), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	lin-10; AW208791; Mint-3; X11gamma; mint3	lin-10; AW208791; Mint-3; X11gamma; mint3
Mus musculus	RefSeq	ILMN_260008	ILMN_260008	CCL26	NM_001013412.2	NM_001013412.2		541307	113374165	NM_001013412.2	Ccl26	NP_001013430.2	ILMN_2905256	004560164	S	200	CAGGTAAGCAATTCTGTGTCCAGCCAGGGGCCAAATGGGTGCAGAGATTC	5	-	136036350-136036399	5qG2	Mus musculus chemokine (C-C motif) ligand 26 (Ccl26), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	eoxtaxin-3	eoxtaxin-3
Mus musculus	RefSeq	ILMN_245278	ILMN_245278	B230396O12RIK	NM_172878.2	NM_172878.2		242800	61098156	NM_172878.2	B230396O12Rik	NP_766466.2	ILMN_2806479	007160634	S	3253	ACTTCAGCCCACCCATGTACGAGTACGGAGTCGGGGAGTGCCACCTACAA				4qE2	Mus musculus RIKEN cDNA B230396O12 gene (B230396O12Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4932418L02	4932418L02
Mus musculus	RefSeq	ILMN_212299	ILMN_212299	ACTN4	NM_021895.2	NM_021895.2		60595	18702319	NM_021895.2	Actn4	NP_068695.1	ILMN_1242390	005080767	S	852	GGCCCGACGAGAAGGCCATAATGACATATGTGTCCAGCTTCTACCATGCC	7	-	29696526-29696575	7qA3	Mus musculus actinin alpha 4 (Actn4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; A temporary protrusion or retractile process of a cell, associated with flowing movements of the protoplasm, and serving for locomotion and feeding [goid 31143] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the movement of a cell [goid 51272] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the movement of a cell [goid 51272] [evidence IDA]; Any process that activates, maintains or increases the rate of pinocytosis. Pinocytosis is the process whereby cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes [goid 48549] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence TAS]	C77391; MGC102374	C77391; MGC102374
Mus musculus	RefSeq	ILMN_212299	ILMN_212299	ACTN4	NM_021895.2	NM_021895.2		60595	18702319	NM_021895.2	Actn4	NP_068695.1	ILMN_2672767	001110102	S	2466	AATTCAAGGCCTGCCTCATCAGCCTGGGCTATGACGTGGAGAATGACCGG	7	-	29680453-29680502	7qA3	Mus musculus actinin alpha 4 (Actn4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; A temporary protrusion or retractile process of a cell, associated with flowing movements of the protoplasm, and serving for locomotion and feeding [goid 31143] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the movement of a cell [goid 51272] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the movement of a cell [goid 51272] [evidence IDA]; Any process that activates, maintains or increases the rate of pinocytosis. Pinocytosis is the process whereby cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes [goid 48549] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence TAS]	C77391; MGC102374	C77391; MGC102374
Mus musculus	RefSeq	ILMN_212299	ILMN_212299	ACTN4	NM_021895.2	NM_021895.2		60595	18702319	NM_021895.2	Actn4	NP_068695.1	ILMN_2673599	000520114	S	2619	CAGACACAGACACAGCTGATCAGGTCATCGCCTCCTTCAAGGTCCTGGCA	7	-	29679528-29679577	7qA3	Mus musculus actinin alpha 4 (Actn4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; A temporary protrusion or retractile process of a cell, associated with flowing movements of the protoplasm, and serving for locomotion and feeding [goid 31143] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the movement of a cell [goid 51272] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the movement of a cell [goid 51272] [evidence IDA]; Any process that activates, maintains or increases the rate of pinocytosis. Pinocytosis is the process whereby cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes [goid 48549] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence TAS]	C77391; MGC102374	C77391; MGC102374
Mus musculus	RefSeq	ILMN_199896	ILMN_199896	LOC381556	XM_355522.1	XM_355522.1			38078813	XM_355522.1	LOC381556		ILMN_1221939	004260390	S	1818	GTCCTGGGTGTTCTGGGTGAATGGGAAAGACAGGGAAGTCTTGCTAGGCC										
Mus musculus	RefSeq	ILMN_191661	ILMN_249253	PPP2R5E	NM_012024.2	NM_012024.2		26932	55741699	NM_012024.2	Ppp2r5e	NP_036154.1	ILMN_2623244	002570079	S	3020	GCGCCAGCCCTGTTTTTAGCCAGAAAGGATTCAGGATCAACATTATGCGT	12	-	76553608-76553657	12qC3	Mus musculus protein phosphatase 2, regulatory subunit B (B56), epsilon isoform (Ppp2r5e), mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]	4633401M22Rik; AI449017	4633401M22Rik; AI449017
Mus musculus	RefSeq	ILMN_214355	ILMN_214355	KLRG1	NM_016970.1	NM_016970.1		50928	8850224	NM_016970.1	Klrg1	NP_058666.1	ILMN_2944755	005700014	S	1046	GCCTGAGCTGTAGGGAGAAGTGCAGTGGTTACCGGAGTCCAGAGTGATGG	6	-	122220883-122220932	6qF1	Mus musculus killer cell lectin-like receptor subfamily G, member 1 (Klrg1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence TAS]	MGC123930; MAFA-L; MAFA; 2F1-Ag	MGC123930; MAFA-L; MAFA; 2F1-Ag
Mus musculus	RefSeq	ILMN_196855	ILMN_196855	LOC245603	XM_142130.1	XM_142130.1			20985493	XM_142130.1	LOC245603		ILMN_2526036	003450497	S	1199	GTGATTCCATCTTTCCTAAGATTTATTTGGCTGTCGCTTGTAAGTACGCG										
Mus musculus	RefSeq	ILMN_234616	ILMN_234616	OLFR671	NM_001011755.1	NM_001011755.1		257910	58801297	NM_001011755.1	Olfr671	NP_001011755.1	ILMN_3160916	004570296	S	514	GGCCATCAAAGCATTCCTCATACTTACTGTGAGCACATGGGCATTGCCCG	7	-	112123934-112123983	7qE3	Mus musculus olfactory receptor 671 (Olfr671), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR32-12	MOR32-12
Mus musculus	RefSeq	ILMN_201307	ILMN_201307	LOC382409	XM_356489.1	XM_356489.1			38090740	XM_356489.1	LOC382409		ILMN_2541827	005270288	S	414	CCTGGTGGGAATGGGTGGCTTGCAGACAGAGAAGGAAACTAGGCAAGGCC										
Mus musculus	Riken	ILMN_205219	ILMN_205219	E130309O17RIK	ri|E130309O17|PX00208L04|AK053813|1588					AK053813	E130309O17Rik		ILMN_1236022	004260402	S	1336	CCAAGCAAGAGAGGCTGAGGGTGAACTTGGTAGCTGGCCTCACACGATAC										
Mus musculus	RefSeq	ILMN_221173	ILMN_221173	TMEM48	NM_028355.3	NM_028355.3		72787	142345807	NM_028355.3	Tmem48	NP_082631.1	ILMN_1231705	004570669	S	2495	CTCAGCAGAATAACCGAAAACTGCCTTTTCTGTACCCAGTGCTTTTTGTG	4	+	107086862-107086911	4qC7	Mus musculus transmembrane protein 48 (Tmem48), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		2810475A17Rik; NDC1; RP23-392J14.4; AI450313	2810475A17Rik; NDC1; RP23-392J14.4; AI450313
Mus musculus	RefSeq	ILMN_209756	ILMN_209756	PCDHA1	NM_054072.1	NM_054072.1		116731	16905102	NM_054072.1	Pcdha1	NP_473413.1	ILMN_2598910	005700035	S	2312	CCCGGGTTTAGCCCCAGGTTTGAACATAGCGGAAAGAAGTGACCACGCAG	18	+	37092250-37092299	18qB2-qB3	Mus musculus protocadherin alpha 1 (Pcdha1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CNR; MGC90628	CNR; MGC90628
Mus musculus	RefSeq	ILMN_220828	ILMN_220828	9130014G24RIK	NM_172547.1	NM_172547.1		215772	27369765	NM_172547.1	9130014G24Rik	NP_766135.1	ILMN_2931500	003120292	S	1776	TGCCATCAGTGAAAAGTTATAGACTGTGCAGAAAGCAGGTCCTAAGCAAC	10	-	10090159-10090208	10qA1	Mus musculus RIKEN cDNA 9130014G24 gene (9130014G24Rik), mRNA.					
Mus musculus	Riken	ILMN_203808	ILMN_203808	A330055K22RIK	ri|A330055K22|PX00132C01|AK039532|2339					AK039532	A330055K22Rik		ILMN_2560139	006220161	S	1850	ACAGCGCAGAGCGCACAGGCCCACTTAGGCCAGGAGAAAGGTGAACAGGA										
Mus musculus	RefSeq	ILMN_209564	ILMN_209564	AFMID	NM_027827.2	NM_027827.2		71562	31560783	NM_027827.2	Afmid	NP_082103.1	ILMN_2827607	006040278	S	1849	GCTCTACCAGACCTGATAACTATTCCTGCAGCACACCACTGGGCCTTCTG	11	+	117700744-117700793	11qE2	Mus musculus arylformamidase (Afmid), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid [goid 6569] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine [goid 4061] [evidence IDA]	formylase; Ammd; Kf; 9030621K19Rik	formylase; Ammd; Kf; 9030621K19Rik
Mus musculus	RefSeq	ILMN_209564	ILMN_209564	AFMID	NM_027827.2	NM_027827.2		71562	31560783	NM_027827.2	Afmid	NP_082103.1	ILMN_2742295	004760301	S	601	GTGGGATCTACGACCTGGAGCCCCTCATAGCCACCTCCCAGAATGACCCT	11	+	117696832-117696881	11qE2	Mus musculus arylformamidase (Afmid), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid [goid 6569] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine [goid 4061] [evidence IDA]	formylase; Ammd; Kf; 9030621K19Rik	formylase; Ammd; Kf; 9030621K19Rik
Mus musculus	RefSeq	ILMN_209564	ILMN_209564	AFMID	NM_027827.2	NM_027827.2		71562	31560783	NM_027827.2	Afmid	NP_082103.1	ILMN_2626209	004070241	S	530	TGCTATGGTGCTCCTGGCCCGCTGGACCAAGCATGGCGTCACACCCAACC	11	+	117696501-117696550	11qE2	Mus musculus arylformamidase (Afmid), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid [goid 6569] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine [goid 4061] [evidence IDA]	formylase; Ammd; Kf; 9030621K19Rik	formylase; Ammd; Kf; 9030621K19Rik
Mus musculus	RefSeq	ILMN_209564	ILMN_209564	AFMID	NM_027827.2	NM_027827.2		71562	31560783	NM_027827.2	Afmid	NP_082103.1	ILMN_2600443	007050735	S	845	GCTGCGTGGTGTGGATCACTTTGACATCATAGAGAATCTGACCCGGGAGG	11	+	117697760-117697809	11qE2	Mus musculus arylformamidase (Afmid), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid [goid 6569] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine [goid 4061] [evidence IDA]	formylase; Ammd; Kf; 9030621K19Rik	formylase; Ammd; Kf; 9030621K19Rik
Mus musculus	RefSeq	ILMN_209564	ILMN_209564	AFMID	NM_027827.2	NM_027827.2		71562	31560783	NM_027827.2	Afmid	NP_082103.1	ILMN_2702894	000870280	S	432	TGGACCAGGTGACCCGCAGTGTCGTGTTTCTACAGAGGCGCTATCCAAGC	11	+	117696277-117696326	11qE2	Mus musculus arylformamidase (Afmid), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid [goid 6569] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine [goid 4061] [evidence IDA]	formylase; Ammd; Kf; 9030621K19Rik	formylase; Ammd; Kf; 9030621K19Rik
Mus musculus	RefSeq	ILMN_209564	ILMN_209564	AFMID	NM_027827.2	NM_027827.2		71562	31560783	NM_027827.2	Afmid	NP_082103.1	ILMN_2597013	005890040	S	756	GGTCAGCATGACTCCCCAGAGTTCCACCGGCAGTCCAAGGAGTTCTACGA	11	+	117697071-117697120	11qE2	Mus musculus arylformamidase (Afmid), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid [goid 6569] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine [goid 4061] [evidence IDA]	formylase; Ammd; Kf; 9030621K19Rik	formylase; Ammd; Kf; 9030621K19Rik
Mus musculus	RefSeq	ILMN_209564	ILMN_209564	AFMID	NM_027827.2	NM_027827.2		71562	31560783	NM_027827.2	Afmid	NP_082103.1	ILMN_2702893	005720593	S	431	GTGGACCAGGTGACCCGCAGTGTCGTGTTTCTACAGAGGCGCTATCCAAG	11	+	117696276-117696325	11qE2	Mus musculus arylformamidase (Afmid), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid [goid 6569] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine [goid 4061] [evidence IDA]	formylase; Ammd; Kf; 9030621K19Rik	formylase; Ammd; Kf; 9030621K19Rik
Mus musculus	RefSeq	ILMN_211585	ILMN_211585	2410129H14RIK	NM_175245.2	NM_175245.2		76789	31340717	NM_175245.2	2410129H14Rik	NP_780454.1	ILMN_1249032	003930202	S	1281	AAGCTGGATGGAGTTGCTTCTGCCCCTGTTACAGAATCTCAGTGGGATAT	14	-	97918547-97918596	14qE2.2	Mus musculus RIKEN cDNA 2410129H14 gene (2410129H14Rik), mRNA.				AI120158	AI120158
Mus musculus	RefSeq	ILMN_209723	ILMN_209723	TMCO6	NM_028036.3	NM_028036.3		71983	112181163	NM_028036.3	Tmco6	NP_082312.3	ILMN_2621853	007050291	S	1314	TCTGTGCAATGTCGTAGAGAAGGGTCCAGCTTACTGCCAGCGGTTGTGGC	18	+	36901327-36901376	18qB2	Mus musculus transmembrane and coiled-coil domains 6 (Tmco6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2410015B03Rik	2410015B03Rik
Mus musculus	RefSeq	ILMN_209723	ILMN_209723	TMCO6	NM_028036.3	NM_028036.3		71983	112181163	NM_028036.3	Tmco6	NP_082312.3	ILMN_1232025	005960332	S	1230	CTCCTTGCTCTCTCTGGATCTGATCGAGCCGCTCTTGCAGTTGTTGCCAC	18	+	36900728-36900777	18qB2	Mus musculus transmembrane and coiled-coil domains 6 (Tmco6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2410015B03Rik	2410015B03Rik
Mus musculus	RefSeq	ILMN_209723	ILMN_209723	TMCO6	NM_028036.3	NM_028036.3		71983	112181163	NM_028036.3	Tmco6	NP_082312.3	ILMN_2620037	003290408	S	466	GCCTTGTTGCAGCTTGAGGCGGCTCGGTGCCTTCATGAGCTCTCTCATTC	18	+	36897372-36897421	18qB2	Mus musculus transmembrane and coiled-coil domains 6 (Tmco6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2410015B03Rik	2410015B03Rik
Mus musculus	Riken	ILMN_204933	ILMN_204933	TCFCP2	ri|D230015P20|PX00188B06|AK051891|2175					AK051891	Tcfcp2		ILMN_1212876	007100368	S	1760	GACTTTGGGGCCCACTTGGTGTAAGGAGAGAATCTGTGGCACGCATCCAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence TAS]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223900	ILMN_223900	BC004012	scl24620.16_177				20149759	NM_138671	BC004012		ILMN_2771225	000290494	S	2703	CAGAGGAGAGCAGGGTCTGAAGTGTGTGCCACGCATCTCAAAAGCAAGTG										
Mus musculus	RefSeq	ILMN_192688	ILMN_231431	VWC2	NM_177033.2	NM_177033.2		319922	31342639	NM_177033.2	Vwc2	NP_796007.1	ILMN_1225891	002760400	S	2224	GTGGGCAGGAATCCATGTCCGCTTTAGACCAGAACCTGTGGCACAAAGTC	11	+	11167446-11167495	11qA1	Mus musculus von Willebrand factor C domain containing 2 (Vwc2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]		UNQ739; PSST739; A930041G11Rik; RP23-305B2.1	UNQ739; PSST739; A930041G11Rik; RP23-305B2.1
Mus musculus	RefSeq	ILMN_212083	ILMN_212083	GABRP	NM_146017.3	NM_146017.3		216643	118131004	NM_146017.3	Gabrp	NP_666129.1	ILMN_1221640	000020544	S	1142	GCTTCGTGTTTGGGGCCTTACTGGAGTATGCAGTTGCTCACTACAGCTCC	11	-	33454320-33454369	11qA4	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, pi (Gabrp), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	MGC38123	MGC38123
Mus musculus	RefSeq	ILMN_212083	ILMN_212083	GABRP	NM_146017.3	NM_146017.3		216643	118131004	NM_146017.3	Gabrp	NP_666129.1	ILMN_1251237	002450093	S	2859	CAGCTTTCCCTGTCCTTTCTACAACAAACCGGGGCTGTAGATGTTCTTTC	11	-	33451152-33451201	11qA4	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, pi (Gabrp), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	MGC38123	MGC38123
Mus musculus	RefSeq	ILMN_199714	ILMN_224977	LOC628836	XM_893628.1	XM_893628.1		628836	82954302	XM_893628.1	LOC628836	XP_898721.1	ILMN_1214543	004210136	S	1	ATGGCAGAGGTGACGCGCAGTTACCCTCCGGACCCTCTGATCATGTTGCT	14	-	59550997-59551046	14qD1	PREDICTED: Mus musculus similar to Glycine cleavage system H protein, mitochondrial precursor (LOC628836), mRNA.					
Mus musculus	RefSeq	ILMN_187304	ILMN_187304	TRIM50	NM_178240.2	NM_178240.2		215061	118130549	NM_178240.2	Trim50	NP_839971.1	ILMN_2442967	005490445	S	1267	GAGCTCACGTTCTTTGACGCTGACCGTCCTGATGATCTGCGGACACTCTA	5	+	135843339-135843388	5qG2	Mus musculus tripartite motif-containing 50 (Trim50), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219369	ILMN_219369	SCAMP2	NM_022813.2	NM_022813.2		24044	31560286	NM_022813.2	Scamp2	NP_073724.1	ILMN_1226985	006100750	S	2183	CTGTCAGCCCTAGAGCCACCAAGTGGTAATGTCAGCCACCGGGGTTTTGT	9	+	57436492-57436541	9qB	Mus musculus secretory carrier membrane protein 2 (Scamp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AI875466; Sc2	AI875466; Sc2
Mus musculus	RefSeq	ILMN_213782	ILMN_213782	P2RY10	NM_172435.2	NM_172435.2		78826	31982065	NM_172435.2	P2ry10	NP_766023.1	ILMN_2723040	001980672	S	214	GCTTGCTAAAGGGGCTTTCTATACAGTTGACAAGGAGTAGTGGATGCCAC	X	+	103292397-103292446	XqD	Mus musculus purinergic receptor P2Y, G-protein coupled 10 (P2ry10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y10; 5830408N17Rik	P2Y10; 5830408N17Rik
Mus musculus	RefSeq	ILMN_213782	ILMN_213782	P2RY10	NM_172435.2	NM_172435.2		78826	31982065	NM_172435.2	P2ry10	NP_766023.1	ILMN_2954781	006400070	S	2633	AGGTCTGAAATGAACAGAGCATAGACATTTGGTATGCAGGCAAGAAAAGG	X	+	103307495-103307544	XqD	Mus musculus purinergic receptor P2Y, G-protein coupled 10 (P2ry10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y10; 5830408N17Rik	P2Y10; 5830408N17Rik
Mus musculus	MEEBO	ILMN_187411	ILMN_187411	D530031C13RIK	scl00382563.1_1				51766788	XM_356572	D530031C13Rik		ILMN_1217757	003170537	S	1	CACCGACATCAGTAGCCTTATAACTGCAGTAGCTGTGACACTCTGTTTTG										
Mus musculus	MEEBO	ILMN_187411	ILMN_187411	D530031C13RIK	scl00382563.1_1				51766788	XM_356572	D530031C13Rik		ILMN_2535231	000010202	S	2668	GGCCCTGATGCAGAGGGGAAAGAGACAGAGCTGGATAGAGAAGGTGCTTC										
Mus musculus	Riken	ILMN_203237	ILMN_203237	C330006F04RIK	ri|C330006F04|PX00075H21|AK049135|1919					AK049135	C330006F04Rik		ILMN_1258210	005080037	S	281	CGCTTACGTGAAGAGCCACCGCGTTTTTAGGCGCCCAGAGGGAAGTAGCT										
Mus musculus	Riken	ILMN_202200	ILMN_202200	1700093E07RIK	ri|1700093E07|ZX00077A13|AK007048|1263					AK007048	1700093E07Rik		ILMN_1225987	001170050	S	5	GCTGAGAGGTCTTCCAACACAAGCGACCAACTCAGGTCTTTCTGCCTGAG										
Mus musculus	MEEBO	ILMN_184669	ILMN_184669	221973_54_RC	221973_54_rc						221973_54_rc		ILMN_2420550	005390612	S	20	TTTTTGTCAATATTACTTTTCTCTGCCCATTGCAGTACACAACGATGTCC										
Mus musculus	RefSeq	ILMN_199594	ILMN_199594	LOC383709	XM_357198.1	XM_357198.1			38074846	XM_357198.1	LOC383709		ILMN_1258626	003120561	S	610	CCTTTGGACAAGATGTCACCCAAGAGCGGTCAGAGCCCCAGCATGGAAGG										
Mus musculus	RefSeq	ILMN_255141	ILMN_255141	RDBP	NM_001045863.1	NM_001045863.1		27632	114052227	NM_001045863.1	Rdbp	NP_001039328.1	ILMN_3094608	002350554	A	1185	CGAAAACAGCCCATGCTGGACGCTGCTACTGGCAAATCTGTCTGGGGCTC	17	+	34990579-34990614:34990753-34990766	17qB1	Mus musculus RD RNA-binding protein (Rdbp), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D17H6S45; NELF-E; RD	D17H6S45; NELF-E; RD
Mus musculus	RefSeq	ILMN_216279	ILMN_216279	POLE4	NM_025882.3	NM_025882.3		66979	146135012	NM_025882.3	Pole4	NP_080158.1	ILMN_1236601	002510484	S	1426	CTGCAGGATCTTCTCCCTAGAATGATACATTCAGTCCTGTAATACGTTAA				6qC3	Mus musculus polymerase (DNA-directed), epsilon 4 (p12 subunit) (Pole4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	2400007P05Rik; 5830430F06Rik	2400007P05Rik; 5830430F06Rik
Mus musculus	RefSeq	ILMN_220824	ILMN_238201	BTBD11	NM_001017525.1	NM_001017525.1		74007	62953119	NM_001017525.1	Btbd11	NP_001017525.1	ILMN_1226537	004480148	S	3191	CACTCTCTGGATTCTGAGAGTGTGCAGTCTGCAATTATCTATGATGAAAG	10	+	85122293-85122342	10qC1	Mus musculus BTB (POZ) domain containing 11 (Btbd11), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	6330404E16Rik	6330404E16Rik
Mus musculus	RefSeq	ILMN_238201	ILMN_238201	BTBD11	NM_001017525.1	NM_001017525.1		74007	62953119	NM_001017525.1	Btbd11	NP_001017525.1	ILMN_3139253	005690603	A	3759	AGAGTGACACACTGTCGCTTGCCTTCAGGGATGCTGCTCTCTAACCCAGC	10	+	85122861-85122910	10qC1	Mus musculus BTB (POZ) domain containing 11 (Btbd11), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	6330404E16Rik	6330404E16Rik
Mus musculus	RefSeq	ILMN_184525	ILMN_316287	9130024F11RIK	XR_035240.1	XR_035240.1		78900	149233996	XR_035240.1	9130024F11Rik		ILMN_2419364	003170634	S	193	CCCGGATAAAGGCCTTTTCTGTTTCAAGTGACATGTTTTTCCCAATCCAG				1qC1.3	PREDICTED: Mus musculus RIKEN cDNA 9130024F11 gene (9130024F11Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_220972	ILMN_220972	OLFR971	NM_146614.1	NM_146614.1		258607	33239225	NM_146614.1	Olfr971	NP_666825.1	ILMN_2729325	003890338	S	525	CCACTATTTCTGCGATCTTTTTCCACTCTTGGAGCTATCATGCTCCAGTA	9	+	39647545-39647594	9qA5.1	Mus musculus olfactory receptor 971 (Olfr971), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR171-13	MOR171-13
Mus musculus	RefSeq	ILMN_185066	ILMN_235745	NUP35	NM_027091.2	NM_027091.2		69482	142361375	NM_027091.2	Nup35	NP_081367.1	ILMN_2715150	001820025	S	1485	ATTGTCATCTCTTATATTCTTTTTAAAAACCATCTACAACTAATGTTTCC	2	+	80498983-80499032	2qC3	Mus musculus nucleoporin 35 (Nup35), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		MP44; 5330402E05Rik; 35kDa; 2310006I24Rik; NO44	MP44; 5330402E05Rik; 35kDa; 2310006I24Rik; NO44
Mus musculus	RefSeq	ILMN_218729	ILMN_218729	LAMB2	NM_008483.2	NM_008483.2		16779	31982222	NM_008483.2	Lamb2	NP_032509.2	ILMN_2699488	006840209	S	5225	ACAAGCCAGGGCAGAACAACTGCGGGATGAGGCTCGGGACCTGTTGCAGG	9	+	108392468-108392517	9qF2	Mus musculus laminin, beta 2 (Lamb2), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Long distance growth of a single axon process involved in regeneration of the neuron [goid 48677] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Lams; AW211941; Lamb-2	Lams; AW211941; Lamb-2
Mus musculus	RefSeq	ILMN_221946	ILMN_221946	GTF2F1	NM_133801.2	NM_133801.2		98053	118130859	NM_133801.2	Gtf2f1	NP_598562.1	ILMN_2742455	004040709	S	1318	ACCAGTCGGCCAGGGACTCCCAGTGCAGAAGCAGCAAGCACCTCTTCTAC	17	-	57143369-57143418	17qD	Mus musculus general transcription factor IIF, polypeptide 1 (Gtf2f1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	C76800; 2810405L04Rik; RAP74	C76800; 2810405L04Rik; RAP74
Mus musculus	RefSeq	ILMN_197616	ILMN_199746	EG386506	XM_359354.4	XM_359354.4		386506	82954105	XM_359354.4	EG386506	XP_359354.2	ILMN_2528750	003520438	S	213	GGGCTGCTGGGGCCTGGTCATCTACTCTGCTACTGGTGTTATATGCTCAG	14	+	53394696-53394745	14qC2	PREDICTED: Mus musculus predicted gene, EG386506 (EG386506), mRNA.					
Mus musculus	RefSeq	ILMN_219096	ILMN_219096	SCARB2	NM_007644.2	NM_007644.2		12492	31982469	NM_007644.2	Scarb2	NP_031670.1	ILMN_2907331	003310564	S	1831	CCTGGCCTGTCAAGAAGGAAACATAGCACTGGCAAGCGAGAAGCCCCTCC	5	-	93519302-93519351	5qE2	Mus musculus scavenger receptor class B, member 2 (Scarb2), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cd36l2; LIMP-2; MLGP85; LGP85; 9330185J12Rik	Cd36l2; LIMP-2; MLGP85; LGP85; 9330185J12Rik
Mus musculus	MEEBO	ILMN_186069	ILMN_186069	BC030499	scl41208.8_88				51766649	XM_109623	BC030499		ILMN_1256035	004040600	S	499	CAGGTATGCAGAGTTCTGAAAGCATGGCTGGAGACCTGAATTTGTTGGAG							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216705	ILMN_252775	PEX1	NM_027777.1	NM_027777.1		71382	61657894	NM_027777.1	Pex1	NP_082053.1	ILMN_2674234	007210343	S	3114	CGTCTAACTGTGTCAGCAACTGGTTGACTACTCGGTCTGTAACCCCTGTG	5	+	3630094-3630112:3630189-3630219	5qA1	Mus musculus peroxisome biogenesis factor 1 (Pex1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The microtubule-based process by which a peroxisome is transported to, and/or maintained in, a specific location. A peroxisome is a small membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 60152] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ZWS1; E330005K07Rik; 5430414H02Rik; MGC102188	ZWS1; E330005K07Rik; 5430414H02Rik; MGC102188
Mus musculus	RefSeq	ILMN_186576	ILMN_212195	GLCCI1	NM_133236.2	NM_133236.2		170772	134031971	NM_133236.2	Glcci1	NP_573499.2	ILMN_2436695	006020521	S	2063	CGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACT	6	+	8543407-8543456	6qA1	Mus musculus glucocorticoid induced transcript 1 (Glcci1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Tssn1; Gig18; 2310047L21Rik; A130036A18Rik	Tssn1; Gig18; 2310047L21Rik; A130036A18Rik
Mus musculus	RefSeq	ILMN_212195	ILMN_212195	GLCCI1	NM_133236.2	NM_133236.2		170772	134031971	NM_133236.2	Glcci1	NP_573499.2	ILMN_2733576	000270296	S	6073	GCCACTGCGCTGAACAGTATTCAAGTTATATAATATGGCTTTACACAAGA	6	+	8547417-8547466	6qA1	Mus musculus glucocorticoid induced transcript 1 (Glcci1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Tssn1; Gig18; 2310047L21Rik; A130036A18Rik	Tssn1; Gig18; 2310047L21Rik; A130036A18Rik
Mus musculus	RefSeq	ILMN_212195	ILMN_212195	GLCCI1	NM_133236.2	NM_133236.2		170772	134031971	NM_133236.2	Glcci1	NP_573499.2	ILMN_2706176	007100484	S	3500	GCTGCCTACAGTTACTCTTCAGTTTTCCATAGGTCATACCTGCGGTTTCC	6	+	8544844-8544893	6qA1	Mus musculus glucocorticoid induced transcript 1 (Glcci1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Tssn1; Gig18; 2310047L21Rik; A130036A18Rik	Tssn1; Gig18; 2310047L21Rik; A130036A18Rik
Mus musculus	RefSeq	ILMN_212195	ILMN_212195	GLCCI1	NM_133236.2	NM_133236.2		170772	134031971	NM_133236.2	Glcci1	NP_573499.2	ILMN_2623855	006900224	S	5822	ATGCTTTTTTGGTGATGAAATCTATGTACGATATTTATAGTGATGTGCTT	6	+	8547166-8547215	6qA1	Mus musculus glucocorticoid induced transcript 1 (Glcci1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Tssn1; Gig18; 2310047L21Rik; A130036A18Rik	Tssn1; Gig18; 2310047L21Rik; A130036A18Rik
Mus musculus	RefSeq	ILMN_184298	ILMN_184298	TMPRSS4	NM_145403.2	NM_145403.2		214523	118130127	NM_145403.2	Tmprss4	NP_663378.1	ILMN_2428061	001030246	S	1307	TGCTACTGCAGGCATCAGTCCAGGTCATTGACAGCACACGGTGCAATGCA	9	-	44983262-44983311	9qA5.2	Mus musculus transmembrane protease, serine 4 (Tmprss4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	MGC29209	MGC29209
Mus musculus	RefSeq	ILMN_184298	ILMN_184298	TMPRSS4	NM_145403.2	NM_145403.2		214523	118130127	NM_145403.2	Tmprss4	NP_663378.1	ILMN_2459260	002140274	S	336	CTTTCGCAAACCCCGAAGGCCCCAGGAGACCTTCAAAAAGGTGGGGATCC	9	-	44993951-44994000	9qA5.2	Mus musculus transmembrane protease, serine 4 (Tmprss4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	MGC29209	MGC29209
Mus musculus	Riken	ILMN_206123	ILMN_206123	4921507O14RIK	ri|C630029J23|PX00084D17|AK083226|2747					AK083226	4921507O14Rik		ILMN_1237420	004610408	S	2537	GCTACCCAAAAGCCGTACTTGGGAAGTGGCTAACTTTACACTCCAGGCTG										
Mus musculus	RefSeq	ILMN_210156	ILMN_210156	MUG2	NM_008646.1	NM_008646.1		17837	6678965	NM_008646.1	Mug2	NP_032672.1	ILMN_2793806	004490278	S	4354	TGAGACAGATGAAGTGGCTTATGCTGAATACAGCAGTCCCTGCAGCTCAG	6	+	122050034-122050038:122051087-122051128:122051443-122051445	6qF1	Mus musculus murinoglobulin 2 (Mug2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 17114] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215116	ILMN_215116	6720489N17RIK	scl00211378.1_7				51784053	XM_142448	6720489N17Rik		ILMN_2773383	006760181	S	1323	AAATGTAAGGAATGTGATTAAACTTTTTCCCACCATTATAATCTACGAAG										
Mus musculus	RefSeq	ILMN_223405	ILMN_223405	KCNH7	NM_133207.2	NM_133207.2		170738	116875835	NM_133207.2	Kcnh7	NP_573470.2	ILMN_1241732	006060161	S	3664	GAGCTTGACCCTCGGCAAAGGAAAACTTACCTTCATCCCATCCGGCATCC	2	-	62541087-62541136	2qC1.3	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 7 (Kcnh7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	9330137I11Rik; erg3; Kv11.3	9330137I11Rik; erg3; Kv11.3
Mus musculus	Riken	ILMN_202321	ILMN_202321	5430404L10RIK	ri|4930449A16|PX00031D16|AK015426|1432					AK015426	5430404L10Rik		ILMN_2548696	004210243	S	1169	AACAAGAAGAGCAAGCATGGTGCACCCAGATCATGGGAACAGAACTGGGC										
Mus musculus	RefSeq	ILMN_201173	ILMN_201173	LOC384891	XM_357923.1	XM_357923.1			38089621	XM_357923.1	LOC384891		ILMN_2541349	004860661	S	549	TTGCGCAGTGGGTGAAACGCCTTTCCGCCCCAGGCCACCCCAACAGCCTA										
Mus musculus	MEEBO	ILMN_184634	ILMN_184634	OTX3	scl23967.5_34				31982584	NM_130865	Otx3		ILMN_2603750	000010646	S	1211	CTTGGGTGTACCCCTGTCTCGGTCCCATGGTTATTCTCAGAAGGCTCTCC										
Mus musculus	RefSeq	ILMN_210302	ILMN_245573	LOC433464	XM_485050.5	XM_485050.5		433464	149249955	XM_485050.5	LOC433464	XP_485050.3	ILMN_1218559	002810670	S	2005	CCTCCTTCATTCCCCCACTTACTCTTACTTAATCCGTGTACCACTAGGGG	2	-	116352127-116352176	2qE5	PREDICTED: Mus musculus similar to RAB5B, member RAS oncogene family (LOC433464), mRNA.					
Mus musculus	RefSeq	ILMN_210302	ILMN_245573	LOC433464	XM_485050.5	XM_485050.5		433464	149249955	XM_485050.5	LOC433464	XP_485050.3	ILMN_2604256	003140368	S	2043	TACCACTAGGGGCTCCTACCACAAAGGCTGCTTGTCCAATGACAGGGCAG	2	-	116352089-116352138	2qE5	PREDICTED: Mus musculus similar to RAB5B, member RAS oncogene family (LOC433464), mRNA.					
Mus musculus	RefSeq	ILMN_215437	ILMN_215437	SNAP23	NM_009222.3	NM_009222.3		20619	142389019	NM_009222.3	Snap23	NP_033248.1	ILMN_1217275	000240390	S	2030	GCAAATGTCCATACATCAAGCACTCCAATAGAAAGCTGTATTAGCTCTCT	2	+	120426298-120426347	2qE5	Mus musculus synaptosomal-associated protein 23 (Snap23), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Syndet; 23kDa; Sndt; SNAP-23; AA408749	Syndet; 23kDa; Sndt; SNAP-23; AA408749
Mus musculus	RefSeq	ILMN_208751	ILMN_208751	OLFR43	NM_146711.1	NM_146711.1		258706	33239309	NM_146711.1	Olfr43	NP_666922.1	ILMN_2589171	001500164	S	874	AACCGGGACATGAAGGCTGCTCTGAAGAAACTCTTCCACTGCCCCTCTTC	11	-	74019793-74019842	11qB5	Mus musculus olfactory receptor 43 (Olfr43), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129218; IA7; MOR125-5_p; RP23-20M18.3; MOR125-1; MGC129217; Olfr403	MGC129218; IA7; MOR125-5_p; RP23-20M18.3; MOR125-1; MGC129217; Olfr403
Mus musculus	RefSeq	ILMN_210674	ILMN_210674	HES6	NM_019479.2	NM_019479.2		55927	31980933	NM_019479.2	Hes6	NP_062352.1	ILMN_1214126	003370332	S	178	CTGGTGGAGAAGAAGCGACGCGCACGGATCAACGAGAGTCTTCAGGAGCT	1	-	93243324-93243373	1qD	Mus musculus hairy and enhancer of split 6 (Drosophila) (Hes6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AI326893	AI326893
Mus musculus	RefSeq	ILMN_210674	ILMN_210674	HES6	NM_019479.2	NM_019479.2		55927	31980933	NM_019479.2	Hes6	NP_062352.1	ILMN_2791952	007000634	S	1091	ATCTTGAGACTGAGCATTAGGGTCCTGGGCAGGGACACACAGGCCACAGC	1	-	93242083-93242132	1qD	Mus musculus hairy and enhancer of split 6 (Drosophila) (Hes6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AI326893	AI326893
Mus musculus	Riken	ILMN_206323	ILMN_206323	D330017D17RIK	ri|D330017D17|PX00191D01|AK084583|2641					AK084583	D330017D17Rik		ILMN_1257874	006330131	S	1983	CCAGCCGGTATCTGCAGAAGTGGGCTTCGGGAGGCCATGTGTTCTTTACA										
Mus musculus	RefSeq	ILMN_219621	ILMN_197420	LCMT2	XM_141327.6	XM_141327.6		329504	94367205	XM_141327.6	Lcmt2	XP_141327.5	ILMN_1224693	002060019	S	2377	AGCTAGGAAGCTCGCTTAGTGGTACTTGGAGGACACATCACCTGGTTACC	2	-	120954101-120954150	2qE5	PREDICTED: Mus musculus leucine carboxyl methyltransferase 2 (Lcmt2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The methylation of the C-terminal amino acid of a protein [goid 6481] [evidence ISA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to the carbon atom of the C-terminal residue of a protein [goid 3880] [evidence ISA]		
Mus musculus	RefSeq	ILMN_213471	ILMN_213471	HIST2H2BB	NM_175666.2	NM_175666.2		319189	68226432	NM_175666.2	Hist2h2bb	NP_783597.2	ILMN_2817214	003990408	S	72	CTGCTCCTGCCCCAAAGAAGGGCTCTAAGAAAGCTGTCACGAAAGTGCAG	3	+	96073694-96073743	3qF2.1	Mus musculus histone cluster 2, H2bb (Hist2h2bb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2b-616	H2b-616
Mus musculus	MEEBO	ILMN_216331	ILMN_216331	6330581N18RIK	scl0319453.1_151	NM_176915.2			31342375	NM_176915.2	6330581N18Rik		ILMN_2669841	006840482	S	2959	GTTTGGCTTCTTGGCCAGTGCTTGTATAGTGTTGGGCTGCTGACAAGTTG										
Mus musculus	RefSeq	ILMN_216522	ILMN_216522	RTN4	NM_194054.2	NM_194054.2		68585	141802887	NM_194054.2	Rtn4	NP_918943.1	ILMN_2699645	007040554	S	3318	GATATATAAGGGTGTGATCCAAGCTATCCAGAAATCAGATGAAGGCCACC	11	+	29608118-29608167	11qA3.3	Mus musculus reticulon 4 (Rtn4), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISS]	Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence ISO]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	mKIAA4153; KIAA4153; ASY; NSP-CL; 1110020G17Rik; C130026I10Rik; AA960376; mKIAA0886; NOGO; AA409940; AA407876	mKIAA4153; KIAA4153; ASY; NSP-CL; 1110020G17Rik; C130026I10Rik; AA960376; mKIAA0886; NOGO; AA409940; AA407876
Mus musculus	RefSeq	ILMN_185791	ILMN_311426	5730405N03RIK	XR_035474.1	XR_035474.1		70509	149265868	XR_035474.1	5730405N03Rik		ILMN_1247439	004220619	S	251	CCCGGGATCCAGCAGTAAAATGATGGATCTTCAAATCACACCAGCGAAGC	14	-	118303909-118303958	14qE4	PREDICTED: Mus musculus RIKEN cDNA 5730405N03 gene (5730405N03Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_214255	ILMN_214255	KCNS3	NM_173417.2	NM_173417.2		238076	142350572	NM_173417.2	Kcns3	NP_775593.1	ILMN_2646018	001570066	S	2444	ATGCTCACAATTGGCTTAGAAGGACCTGCTTCTGTCCGAATAGCGAGAAG	12	-	11097447-11097496	12qA1.1	Mus musculus potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (Kcns3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	D12Ertd137e; B230338H13	D12Ertd137e; B230338H13
Mus musculus	RefSeq	ILMN_216736	ILMN_213111	RPE	NM_025683.2	NM_025683.2		66646	141801666	NM_025683.2	Rpe	NP_079959.2	ILMN_1255006	000610377	S	2472	CTACTGAAAATCCTGGCCACTGAGCTTGGACTCTATGGGATTAGATATAT	1	+	66766221-66766270	1qC3	Mus musculus ribulose-5-phosphate-3-epimerase (Rpe), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-ribulose 5-phosphate = D-xylulose 5-phosphate [goid 4750] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730518J08Rik; 2810429B02Rik	5730518J08Rik; 2810429B02Rik
Mus musculus	RefSeq	ILMN_213111	ILMN_213111	RPE	NM_025683.2	NM_025683.2		66646	141801666	NM_025683.2	Rpe	NP_079959.2	ILMN_2633770	004120280	S	2565	TATGGCTTCAAAAAGAATTTTCCTTAATGTACACTCCTCAGTATTCTATA	1	+	66766314-66766363	1qC3	Mus musculus ribulose-5-phosphate-3-epimerase (Rpe), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-ribulose 5-phosphate = D-xylulose 5-phosphate [goid 4750] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730518J08Rik; 2810429B02Rik	5730518J08Rik; 2810429B02Rik
Mus musculus	RefSeq	ILMN_185261	ILMN_260027	UBE4A	NM_145400.2	NM_145400.2		140630	34147054	NM_145400.2	Ube4a	NP_663375.2	ILMN_2468276	006020315	S	3226	GGTCTTGTGTGAAAATAGTGGGGGAAGGCAGGCTCATTTCTAGCTGATAG	9	-	44741264-44741313	9qA5.2	Mus musculus ubiquitination factor E4A, UFD2 homolog (S. cerevisiae) (Ube4a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	9930123J21Rik; UFD2b; 4732444G18Rik	9930123J21Rik; UFD2b; 4732444G18Rik
Mus musculus	RefSeq	ILMN_220612	ILMN_316780	LOC100046898	XM_001478127.1	XM_001478127.1		100046898	149261335	XM_001478127.1	LOC100046898	XP_001478177.1	ILMN_2724386	005960170	S	863	GTCCTCTTACCCCGTATTCCCCATGGGTTTTCCTCGGCTTTGGAGAAGAG					PREDICTED: Mus musculus similar to Cell division cycle 34 homolog (S. cerevisiae) (LOC100046898), mRNA.					
Mus musculus	RefSeq	ILMN_214537	ILMN_214537	CBL	NM_007619.2	NM_007619.2		12402	80978931	NM_007619.2	Cbl	NP_031645.2	ILMN_2649011	006980202	S	2513	ACCCGTGCCAGCTGTACTGGCCCGCCGGACCCTGTCTGACATCTCCAATG	9	-	43960916-43960965	9qA5.1-qA5.2	Mus musculus Casitas B-lineage lymphoma (Cbl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cbl-2; c-Cbl; 4732447J05Rik	Cbl-2; c-Cbl; 4732447J05Rik
Mus musculus	RefSeq	ILMN_209623	ILMN_209623	COG6	NM_026225.2	NM_026225.2		67542	142356099	NM_026225.2	Cog6	NP_080501.1	ILMN_1219661	002320047	S	2315	TTGGCAATGAGCGTCCGCTTATGGAAGGTCCCGCTGCTTTCCTCTAATTG	3	-	52786570-52786619	3qC	Mus musculus component of oligomeric golgi complex 6 (Cog6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		4933405E16Rik; mKIAA1134; AU018618	4933405E16Rik; mKIAA1134; AU018618
Mus musculus	MEEBO	ILMN_220121	ILMN_220121	E030025P04RIK	scl39398.3.1_224	XM_196056.1			25072301	XM_196056.1	E030025P04Rik		ILMN_1226492	004920168	S	978	TCACACTGTTGGGCAAGGTAACAACTTTTGTAGGCCATCTCATTCCTACC										
Mus musculus	RefSeq	ILMN_260765	ILMN_260765	EPB4.9	NM_013514.2	NM_013514.2		13829	31980787	NM_013514.2	Epb4.9	NP_038542.1	ILMN_2860699	005570669	S	2268	AAACCAGATAGGATGCACCGTTCTAGCACCTGTCCAGGGACCACCGAGCC	14	-	69339075-69339124	14qD2	Mus musculus erythrocyte protein band 4.9 (Epb4.9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	dematin; AI325486	dematin; AI325486
Mus musculus	Riken	ILMN_202777	ILMN_202777	9830128D06RIK	ri|9830128D06|PX00118C19|AK036529|1171					AK036529	9830128D06Rik		ILMN_1259040	000160152	S	926	GAGACTTATTTCTCTCTCAAAGCACCAGACAGGGCTGGGGCAGAGGAGCC										
Mus musculus	RefSeq	ILMN_197522	ILMN_197522	LOC380924	XM_354831.1	XM_354831.1			38076413	XM_354831.1	LOC380924		ILMN_1251559	001510397	S	661	TGGTGGGTCACATGTTCCCGTGGCTACTTCCTCTTTCTTCACACGCTGGC										
Mus musculus	MEEBO	ILMN_220291	ILMN_220291	2900001A12RIK	scl0067107.2_328	NM_025971.1			13385467	NM_025971.1	2900001A12Rik		ILMN_2720193	006370112	S	1267	GTCCTTTTGGGTTTTTAACCTCTGCTGTTTGAGACCTTGTGCTCTTTAAT										
Mus musculus	MEEBO	ILMN_212570	ILMN_212570	5330417K06RIK	scl37722.7_30	NM_172457.1			27369622	NM_172457.1	5330417K06Rik		ILMN_1253324	003060341	S	2594	GCCTGTGCCTATCACATGGTCGGATGATCTACTTCACTAAGTAATACTGT										
Mus musculus	RefSeq	ILMN_220714	ILMN_220714	OLFR1238	NM_146790.1	NM_146790.1		258786	22129272	NM_146790.1	Olfr1238	NP_667001.1	ILMN_2725727	006590520	S	573	CTTCATTGGACTTACTGTGGTTGCGAATGGTGGAGCAATCTGTATGGTCA	2	-	89246612-89246661	2qE1	Mus musculus olfactory receptor 1238 (Olfr1238), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-11	MOR231-11
Mus musculus	MEEBO	ILMN_210283	ILMN_210283	SHANK3	scl47614.23.1_38	NM_021423.1			10946785	NM_021423.1	Shank3		ILMN_1215372	001230598	S	4352	CGGCCCCATTCCTTAGACACAGAGTCACACCCACTAACCCTCTCACCAAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IGI]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_215276	ILMN_215276	RDM1	NM_025654.2	NM_025654.2		66599	142370751	NM_025654.2	Rdm1	NP_079930.1	ILMN_1218934	002340167	S	892	GACCTGCCTTCTGACTTTGACAGGAAGTTCTGCGTGTCCAATCAGTGGGT	11	+	101497189-101497238	11qD	Mus musculus RAD52 motif 1 (Rdm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2410008M22Rik; Rad52b; AW212028	2410008M22Rik; Rad52b; AW212028
Mus musculus	RefSeq	ILMN_200957	ILMN_233220	B230311B06RIK	XM_001001884.2	XM_001001884.2		381914	149257763	XM_001001884.2	B230311B06Rik	XP_001001884.2	ILMN_1236437	002490538	S	354	ATAGTCCTGGCACATCAGGAGCTCAAGGCCGGTCCAGCTACTTGAGACCC	7	+	125740159-125740208	7qF2	PREDICTED: Mus musculus RIKEN cDNA B230311B06 gene (B230311B06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217868	ILMN_217868	PPTC7	NM_177242.4	NM_177242.4		320717	118130366	NM_177242.4	Pptc7	NP_796216.2	ILMN_2688607	004210719	S	4474	CTGTTGAGACTATCATCGTGCGTCCTACCAGAGGCAATGACCCGAATCGA	5	+	122774153-122774202	5qF	Mus musculus PTC7 protein phosphatase homolog (S. cerevisiae) (Pptc7), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AA672638; AI848390; TA-PP2C; 9130017A15Rik	AA672638; AI848390; TA-PP2C; 9130017A15Rik
Mus musculus	RefSeq	ILMN_204914	ILMN_221730	TNRC6B	NM_144812.2	NM_144812.2		213988	67782331	NM_144812.2	Tnrc6b	NP_659061.2	ILMN_1257759	005310609	S	299	CCAATGAGGGAGAAGTAGAGGAAGAAAGCAGCTCCCAGGTGGAACAGGAG	15	+	80590024-80590060:80615169-80615181	15qE1	Mus musculus trinucleotide repeat containing 6b (Tnrc6b), transcript variant 1, mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2700090M07Rik; D230019K20Rik; A730065C02Rik; MGC28739	2700090M07Rik; D230019K20Rik; A730065C02Rik; MGC28739
Mus musculus	RefSeq	ILMN_186272	ILMN_186272	UHRF2	NM_144873.2	NM_144873.2		109113	124430765	NM_144873.2	Uhrf2	NP_659122.2	ILMN_1219262	005870537	S	2360	GCGCCTGATCAGAGAAGACTGTCAGAACCAGAAGCTGTGGGATGAAGTAC	19	+	30163761-30163810	19qC1	Mus musculus ubiquitin-like, containing PHD and RING finger domains 2 (Uhrf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence ISS]; The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink [goid 51865] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	AI426270; Nirf; AW214556; 2310065A22Rik; D130071B19Rik	AI426270; Nirf; AW214556; 2310065A22Rik; D130071B19Rik
Mus musculus	RefSeq	ILMN_186272	ILMN_186272	UHRF2	NM_144873.2	NM_144873.2		109113	124430765	NM_144873.2	Uhrf2	NP_659122.2	ILMN_1224117	000580717	S	3402	CTAGTGGTCTCCATCTGCAGATTAGGAGGGCTGTGCTGGCTTTTGAGAAG	19	+	30168078-30168127	19qC1	Mus musculus ubiquitin-like, containing PHD and RING finger domains 2 (Uhrf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence ISS]; The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink [goid 51865] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	AI426270; Nirf; AW214556; 2310065A22Rik; D130071B19Rik	AI426270; Nirf; AW214556; 2310065A22Rik; D130071B19Rik
Mus musculus	RefSeq	ILMN_186272	ILMN_186272	UHRF2	NM_144873.2	NM_144873.2		109113	124430765	NM_144873.2	Uhrf2	NP_659122.2	ILMN_1221103	002750273	S	666	GTGGATGCCAGAGATGTCGGCCTTGGTGCTTGGTTTGAAGCACATATACA	19	+	30130737-30130786	19qC1	Mus musculus ubiquitin-like, containing PHD and RING finger domains 2 (Uhrf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence ISS]; The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink [goid 51865] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	AI426270; Nirf; AW214556; 2310065A22Rik; D130071B19Rik	AI426270; Nirf; AW214556; 2310065A22Rik; D130071B19Rik
Mus musculus	RefSeq	ILMN_186272	ILMN_186272	UHRF2	NM_144873.2	NM_144873.2		109113	124430765	NM_144873.2	Uhrf2	NP_659122.2	ILMN_1216405	005390411	S	836	GGACAATGTACCCTCTACGTCTAATTCAGACTCAGTTGCTGCTGATGAAG	19	+	30130907-30130956	19qC1	Mus musculus ubiquitin-like, containing PHD and RING finger domains 2 (Uhrf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence ISS]; The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink [goid 51865] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	AI426270; Nirf; AW214556; 2310065A22Rik; D130071B19Rik	AI426270; Nirf; AW214556; 2310065A22Rik; D130071B19Rik
Mus musculus	RefSeq	ILMN_218017	ILMN_218017	VAC14	NM_146216.2	NM_146216.2		234729	31542487	NM_146216.2	Vac14	NP_666328.2	ILMN_2690506	007570349	S	2301	ACTGCTGGACGTGAAGAACAACCCATACCTGATCAAGGCCCTGTACGGCC	8	+	113239340-113239389	8qE1	Mus musculus Vac14 homolog (S. cerevisiae) (Vac14), mRNA.	The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence ISA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Increases the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19209] [evidence ISA]	Tax1bp2; MGC38230; Trx; D8Wsu151e; AA959718; BC032215	Tax1bp2; MGC38230; Trx; D8Wsu151e; AA959718; BC032215
Mus musculus	RefSeq	ILMN_218017	ILMN_218017	VAC14	NM_146216.2	NM_146216.2		234729	31542487	NM_146216.2	Vac14	NP_666328.2	ILMN_2841328	004760291	S	2649	GTCTCTAAGCTGAGGCCACAAGGAGCCTAAGAACCTGCCTCCAGCAGGGC	8	+	113243917-113243966	8qE1	Mus musculus Vac14 homolog (S. cerevisiae) (Vac14), mRNA.	The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence ISA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Increases the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19209] [evidence ISA]	Tax1bp2; MGC38230; Trx; D8Wsu151e; AA959718; BC032215	Tax1bp2; MGC38230; Trx; D8Wsu151e; AA959718; BC032215
Mus musculus	MEEBO	ILMN_211849	ILMN_211849	9330126M15	scl18897.3.1_129				51706299	XM_488952	9330126M15		ILMN_1221788	003460671	S	4256	TGTACATGGAGGAGACGGAAACTTCACTGATATCTTTATGGAAATTGGCC										
Mus musculus	RefSeq	ILMN_201529	ILMN_201529	PABPC1	NM_008774.2	NM_008774.2		18458	31560655	NM_008774.2	Pabpc1	NP_032800.2	ILMN_1259482	005290403	S	2200	CACTGGCATGCTGTTGGAGATTGATAACTCAGAATTACTTCACATGCTCG	15	-	36526743-36526792	15qB3.1	Mus musculus poly A binding protein, cytoplasmic 1 (Pabpc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence ISO]	Pabp1; PabpI; PABP; Pabpl1	Pabp1; PabpI; PABP; Pabpl1
Mus musculus	RefSeq	ILMN_201529	ILMN_201529	PABPC1	NM_008774.2	NM_008774.2		18458	31560655	NM_008774.2	Pabpc1	NP_032800.2	ILMN_1259769	006580709	S	456	AGATGAACCCCAGCGCCCCCAGCTACCCCATGGCCTCTCTGTACGTGGGG	15	-	36538212-36538261	15qB3.1	Mus musculus poly A binding protein, cytoplasmic 1 (Pabpc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence ISO]	Pabp1; PabpI; PABP; Pabpl1	Pabp1; PabpI; PABP; Pabpl1
Mus musculus	RefSeq	ILMN_201529	ILMN_201529	PABPC1	NM_008774.2	NM_008774.2		18458	31560655	NM_008774.2	Pabpc1	NP_032800.2	ILMN_2705407	001580392	S	418	AAAGGTCGCGGCCTGCGGCCCCGCGGGCAGCCGTGCCGAGATGAACCCCA	15	-	36538250-36538261:36538262-36538299	15qB3.1	Mus musculus poly A binding protein, cytoplasmic 1 (Pabpc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence ISO]	Pabp1; PabpI; PABP; Pabpl1	Pabp1; PabpI; PABP; Pabpl1
Mus musculus	RefSeq	ILMN_210304	ILMN_210304	ZFP300	NM_183185.2	NM_183185.2		245368	141802563	NM_183185.2	Zfp300	NP_899008.1	ILMN_2693330	006940333	S	3685	GGTTGTAATTTTATGCCATTGCCACCTAAGTGCTGGTATGACAGGCATGT	X	-	20657199-20657248	XqA2	Mus musculus zinc finger protein 300 (Zfp300), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D930016N04Rik	D930016N04Rik
Mus musculus	RefSeq	ILMN_210304	ILMN_210304	ZFP300	NM_183185.2	NM_183185.2		245368	141802563	NM_183185.2	Zfp300	NP_899008.1	ILMN_2604271	004200465	S	3582	GGACATCTTTCATATCCTTATACCCAACCCCTCTATCTCTAAATCTGTAA	X	-	20657302-20657351	XqA2	Mus musculus zinc finger protein 300 (Zfp300), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D930016N04Rik	D930016N04Rik
Mus musculus	RefSeq	ILMN_222510	ILMN_242342	VPS8	NM_001081366.1	NM_001081366.1		209018	124486982	NM_001081366.1	Vps8	NP_001074835.1	ILMN_1244148	006620192	S	3434	GCTGCTGTGCCAGTTCAGTCCTGACCAAGTCATACAGACACTGCAGGTCC	16	+	21554214-21554263	16qB1	Mus musculus vacuolar protein sorting 8 homolog (S. cerevisiae) (Vps8), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC38232; AU040738; AI315068; mKIAA0804	MGC38232; AU040738; AI315068; mKIAA0804
Mus musculus	RefSeq	ILMN_216183	ILMN_242342	VPS8	NM_001081366.1	NM_001081366.1		209018	124486982	NM_001081366.1	Vps8	NP_001074835.1	ILMN_2668189	006060192	S	4758	CTCCCTGTTACAGGTCAGACCGCAGATGGGCCGGTTTCATTTCGCTCAGA	16	+	21644479-21644528	16qB1	Mus musculus vacuolar protein sorting 8 homolog (S. cerevisiae) (Vps8), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC38232; AU040738; AI315068; mKIAA0804	MGC38232; AU040738; AI315068; mKIAA0804
Mus musculus	RefSeq	ILMN_242342	ILMN_242342	VPS8	NM_001081366.1	NM_001081366.1		209018	124486982	NM_001081366.1	Vps8	NP_001074835.1	ILMN_2930870	003360437	S	468	GAGTTCAGAAGTGACCTGATCGATGACAAGGAGTTTGATATTCCTCAGGT	16	+	21435119-21435136:21435826-21435857	16qB1	Mus musculus vacuolar protein sorting 8 homolog (S. cerevisiae) (Vps8), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC38232; AU040738; AI315068; mKIAA0804	MGC38232; AU040738; AI315068; mKIAA0804
Mus musculus	Riken	ILMN_204683	ILMN_204683	A330029H11RIK	ri|A330029H11|PX00130F01|AK039348|2855					AK039348	A330029H11Rik		ILMN_1230745	004780431	S	2740	GAGGGTATGTATGCTCAGGCAAAGGCAGCAAGGGAACAAGGGCGGCTCAT										
Mus musculus	RefSeq	ILMN_197021	ILMN_197021	LOC226565	XM_136351.3	XM_136351.3			38073544	XM_136351.3	LOC226565		ILMN_2526625	002370753	S	1481	CAGCTGGCCCTGGAAGTGTACTTTGGCCCTTGTAGTCCTTATCAGTTTCG										
Mus musculus	RefSeq	ILMN_199344	ILMN_317651	LOC100041554	XM_001476873.1	XM_001476873.1		100041554	149254763	XM_001476873.1	LOC100041554	XP_001476923.1	ILMN_1236885	002570392	S	1	CAGCAGTAGCCTTACCTGACTTACTTGTCTGGAAGTCCTAGAGGGAGCAA	5	+	147337354-147337403	5qG3	PREDICTED: Mus musculus hypothetical protein LOC100041554 (LOC100041554), mRNA.					
Mus musculus	RefSeq	ILMN_192452	ILMN_253500	LOC634171	XM_908821.3	XM_908821.3		634171	149266006	XM_908821.3	LOC634171	XP_913914.3	ILMN_2488192	000070403	S	30	GCTGCTGTTGGTGCCGCTTTGCTGGGTAAGAGGAATGCCGGTGGAACAGA					PREDICTED: Mus musculus similar to TRAV4-2 (LOC634171), mRNA.					
Mus musculus	RefSeq	ILMN_237647	ILMN_237647	LRRC30	NM_001033340.1	NM_001033340.1		240131	85701837	NM_001033340.1	Lrrc30	NP_001028512.1	ILMN_2873862	005080494	S	964	TTATCCAAGCCCTTGCCGGAGCTGGTGGAGGGGGGACTGGAGATGCTCTA	17	-	67536655-67536704	17qE1.1	Mus musculus leucine rich repeat containing 30 (Lrrc30), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm326	Gm326
Mus musculus	MEEBO	ILMN_191828	ILMN_191828	FLNB	scl46645.26_335				51768715	XM_127565	Flnb		ILMN_2482571	002060433	S	3	CGGATGTGAAAGGCGGAATAGACACGGAGACCGAACTGGAATCAAATGCC						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_191828	ILMN_191828	FLNB	scl46645.26_335				51768715	XM_127565	Flnb		ILMN_2496796	004570491	S	9	GGCCTGCATAAAGTAAGATAAGGCGCCATGGCCGCGGCTTGGTTTTTGGC						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197495	ILMN_197495	LOC213480	XM_135569.2	XM_135569.2			38076290	XM_135569.2	LOC213480		ILMN_2528331	002510048	S	777	GGCACAAGCTACACACATATGAGCCATTTTGGACCAGGATGTGACATTCC										
Mus musculus	RefSeq	ILMN_200011	ILMN_200011	LOC383097	XM_356871.1	XM_356871.1			38079849	XM_356871.1	LOC383097		ILMN_1245101	001240349	S	1337	CCCAGAGTCTCCAGCATACACCCCTACAAACACACAATCCTTTCTGCTAC										
Mus musculus	RefSeq	ILMN_216391	ILMN_316153	CARS2	XM_001474115.1	XM_001474115.1		71941	149258355	XM_001474115.1	Cars2	XP_001474165.1	ILMN_2670601	006980524	S	1747	GGGGCCATCATTTCCTACGTTGAGCAGTTTTTCGAGACTGTTGGGATTTC	8	-	11516166-11516215	8qA1.1	PREDICTED: Mus musculus cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) (Cars2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6423] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys) [goid 4817] [evidence IEA]		
Mus musculus	Riken	ILMN_204157	ILMN_204157	C730031G09RIK	ri|C730031G09|PX00087E23|AK050259|4019					AK050259	C730031G09Rik		ILMN_1232083	005090246	S	3270	AAGCCCAGCTAATGGGTGGCGTGAGGGCGGTGGTGATGGACTCTCAGTAC										
Mus musculus	Riken	ILMN_205634	ILMN_205634	A430103B12RIK	ri|A430103B12|PX00064D23|AK040489|2591					AK040489	A430103B12Rik		ILMN_1256238	004850102	S	2365	GTCCTTGGAAGGGTTAGTCTCGGGATCTGTTACCTTTTCTTAGCTACCGC										
Mus musculus	RefSeq	ILMN_212186	ILMN_212186	CCBL1	NM_172404.2	NM_172404.2		70266	31982062	NM_172404.2	Ccbl1	NP_765992.2	ILMN_2986051	001470170	S	1764	TGGTTGTTTCTGGCCTCTGCCTGGGACAGTAAAGGATGGAGGATCAGGCC	2	-	30041773-30041791:30041877-30041907	2qB	Mus musculus cysteine conjugate-beta lyase 1 (Ccbl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the reaction: phenylpyruvate + L-glutamine = L-phenylalanine + 2-keto-glutaramate [goid 47316] [evidence IEA]; Catalysis of the reaction: L-kynurenine + 2-oxoglutarate = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-glutamate [goid 16212] [evidence IEA]; Catalysis of the reaction: RS-CH2-CH(NH3+)COO- = RSH + NH3 + pyruvate [goid 47804] [evidence IEA]	KatI; 2010009K05Rik; Kat1; AI182306; Gtk	KatI; 2010009K05Rik; Kat1; AI182306; Gtk
Mus musculus	RefSeq	ILMN_212186	ILMN_212186	CCBL1	NM_172404.2	NM_172404.2		70266	31982062	NM_172404.2	Ccbl1	NP_765992.2	ILMN_2623735	002850746	S	1329	GCCCGACCTGCCTGGTGCTATGGATGAGCCCTATGATACACGCTTTGCCA	2	-	30042346-30042354:30042353-30042393	2qB	Mus musculus cysteine conjugate-beta lyase 1 (Ccbl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the reaction: phenylpyruvate + L-glutamine = L-phenylalanine + 2-keto-glutaramate [goid 47316] [evidence IEA]; Catalysis of the reaction: L-kynurenine + 2-oxoglutarate = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-glutamate [goid 16212] [evidence IEA]; Catalysis of the reaction: RS-CH2-CH(NH3+)COO- = RSH + NH3 + pyruvate [goid 47804] [evidence IEA]	KatI; 2010009K05Rik; Kat1; AI182306; Gtk	KatI; 2010009K05Rik; Kat1; AI182306; Gtk
Mus musculus	Riken	ILMN_205994	ILMN_205994	MG29	ri|D630042E03|PX00198I07|AK052749|973					AK052749	Mg29		ILMN_2576743	002480390	S	758	TCCCTGAGTCCTGATGCCTATGTGTGGGATAGAAGGACCTCTCAGTGGTT										
Mus musculus	RefSeq	ILMN_222638	ILMN_222638	RTN4RL1	NM_177708.5	NM_177708.5		237847	142375536	NM_177708.5	Rtn4rl1	NP_808376.1	ILMN_1227403	000670333	S	2203	CTGGGGTCCAAGAACCAATCACCAAAGGAGAGATCGCCAGTGGATGACAT	11	+	75080159-75080208	11qB5	Mus musculus reticulon 4 receptor-like 1 (Rtn4rl1), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The regrowth of axons following their loss or damage [goid 31103] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ngrl2; Ngrh2; Ngr3	Ngrl2; Ngrh2; Ngr3
Mus musculus	RefSeq	ILMN_191245	ILMN_230135	1110065P20RIK	XM_895981.2	XM_895981.2		68920	94372513	XM_895981.2	1110065P20Rik	XP_901074.1	ILMN_1220320	005720546	S	387	GGCTGGACTGTGACCAACTCCCTTCACTAAAAGGGGCCAGTCTTCACGGG	4	-	124352072-124352121		PREDICTED: Mus musculus RIKEN cDNA 1110065P20 gene (1110065P20Rik), mRNA.					
Mus musculus	MEEBO	ILMN_195652	ILMN_195652	TCRG-V5	scl0021639.1_294						Tcrg-V5		ILMN_1252778	006450102	S	11	AATTTGTGCTTCGGAATGTGGAGGAGTCCGATTCTGCTCTGTACTACTGT										
Mus musculus	RefSeq	ILMN_199121	ILMN_199121	LOC380691	XM_354602.1	XM_354602.1			38091321	XM_354602.1	LOC380691		ILMN_2534125	000160626	S	108	GCAATGTCGGAATCTACGCGACCGAGGCTTTGGAGAGGACCTTCGTGGCT										
Mus musculus	Riken	ILMN_206297	ILMN_206297	C130071E11RIK	ri|C130071E11|PX00171L13|AK081716|3453					AK081716	C130071E11Rik		ILMN_1245136	002630180	S	3109	GCTGACTTTATTCTGGAGACTAAGGATAGTGAAGCCATTGCTGCTCACAC										
Mus musculus	RefSeq	ILMN_213942	ILMN_213942	6330406I15RIK	NM_027519.1	NM_027519.1		70717	27734077	NM_027519.1	6330406I15Rik	NP_081795.1	ILMN_2642517	000840209	S	2100	GCCCCTAGTGGCATCTTTTCTGTCCTTCTAAAAACATATTCCCACACTAC	5	+	149699306-149699355	5qG3	Mus musculus RIKEN cDNA 6330406I15 gene (6330406I15Rik), mRNA.				MGC143803; MGC143804	MGC143803; MGC143804
Mus musculus	RefSeq	ILMN_189588	ILMN_319637	VGLL3	XM_001480406.1	XM_001480406.1		73569	149268009	XM_001480406.1	Vgll3	XP_001480456.1	ILMN_2477044	000070347	S	3000	GCCGTGTCTCTTAGAACAGTACCACACTTCCAATCACTGAGCTCACTCCA				16qC1.3	PREDICTED: Mus musculus vestigial like 3 (Drosophila) (Vgll3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189588	ILMN_319637	VGLL3	XM_001480406.1	XM_001480406.1		73569	149268009	XM_001480406.1	Vgll3	XP_001480456.1	ILMN_1220029	001440202	S	1550	GTGCTTCCGAGGGTACCTCAAGGGTTTCATCCTTCCTCCAACAGTGGCAC				16qC1.3	PREDICTED: Mus musculus vestigial like 3 (Drosophila) (Vgll3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216459	ILMN_216459	IL23A	NM_031252.1	NM_031252.1		83430	13752578	NM_031252.1	Il23a	NP_112542.1	ILMN_2799748	005820670	S	1174	CTAACAGGACTACCAATACGAACTGACAAATACTACCACTATGACCTGTG	10	-	127699224-127699273	10qD3	Mus musculus interleukin 23, alpha subunit p19 (Il23a), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling [goid 48771] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	p19	p19
Mus musculus	Riken	ILMN_205803	ILMN_205803	A130004F19RIK	ri|A130004F19|PX00121C04|AK037297|4054					AK037297	A130004F19Rik		ILMN_1253716	003930437	S	3753	GCATCACTCCCAGATTCTCCTGGTGGTGTTAGTGTGCTACTGTGGTGCAG										
Mus musculus	RefSeq	ILMN_226085	ILMN_226085	CHI3L3	NM_009892.1	NM_009892.1		12655	6753415	NM_009892.1	Chi3l3	NP_034022.1	ILMN_3117876	002570240	A	1361	GTCTGCTGTACCAGCTGGGAAGAAACAAAAAATGCTCTTCATCTGTCAGC	3	-	105950557-105950606	3qF2.2	Mus musculus chitinase 3-like 3 (Chi3l3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]	Interacting selectively with chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 8061] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence TAS]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IDA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IDA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]	Ym1; ECF-L; AI505981	Ym1; ECF-L; AI505981
Mus musculus	RefSeq	ILMN_226085	ILMN_226085	CHI3L3	NM_009892.1	NM_009892.1		12655	6753415	NM_009892.1	Chi3l3	NP_034022.1	ILMN_3043036	006370010	I	68	AGCTGATGTGCTACTATACCAGTTGGGCTAAGGACAGGCCAATAGAAGGG	3	-	105967147-105967196	3qF2.2	Mus musculus chitinase 3-like 3 (Chi3l3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]	Interacting selectively with chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 8061] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence TAS]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IDA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IDA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]	Ym1; ECF-L; AI505981	Ym1; ECF-L; AI505981
Mus musculus	MEEBO	ILMN_218587	ILMN_218587	OAS1F	scl27287.5.1_21				24475826	NM_145153	Oas1f		ILMN_2697677	004230300	S	1013	CCATCTGGCTGCAGTCCTCCTGCTTTAGGAACTGTGATACGTGCCTCGTG										
Mus musculus	RefSeq	ILMN_221741	ILMN_221741	KRT84	NM_008474.1	NM_008474.1		16680	33563237	NM_008474.1	Krt84	NP_032500.1	ILMN_2739740	001510301	S	2239	CCTGTGACGGTTCTTCTCCCAGTGGTTCGTCCGGGCCATTTCTCTTATGG	15	-	101355694-101355743	15qF2	Mus musculus keratin 84 (Krt84), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AV235125; Krt2-3; Krt2-16; HRb-1; MGC140837	AV235125; Krt2-3; Krt2-16; HRb-1; MGC140837
Mus musculus	RefSeq	ILMN_212311	ILMN_212311	SLC25A21	NM_172577.2	NM_172577.2		217593	142388205	NM_172577.2	Slc25a21	NP_766165.1	ILMN_2625003	002470035	S	1827	TGAGTATTTTAAAATCATGCTATTTGAAAATTTTTATTAAAGGTAGAATA	12	-	57814353-57814402	12qC1	Mus musculus solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 (Slc25a21), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BB158148; A630030I10; 9930033G19Rik	BB158148; A630030I10; 9930033G19Rik
Mus musculus	MEEBO	ILMN_189007	ILMN_189007	4930578I07RIK	scl46151.1.1_65						4930578I07Rik		ILMN_2457556	005090369	S	5	GGACACTCACCTCTGTCCATATGGGACAGAGAATTGATATGTGGGACAAT										
Mus musculus	RefSeq	ILMN_247715	ILMN_247715	SGPP2	NM_001004173.2	NM_001004173.2		433323	119709820	NM_001004173.2	Sgpp2	NP_001004173.1	ILMN_3023610	004230605	I	3570	GGCCTGTCCTATGCGGACACCAAAGCTTTTAGCTTCCTCTGGGAATCAGG	1	+	78416433-78416482	1qC4	Mus musculus sphingosine-1-phosphate phosphotase 2 (Sgpp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC59240; SPPase2; Spp2	MGC59240; SPPase2; Spp2
Mus musculus	RefSeq	ILMN_199518	ILMN_247715	SGPP2	NM_001004173.2	NM_001004173.2		433323	119709820	NM_001004173.2	Sgpp2	NP_001004173.1	ILMN_1253186	001340315	S	775	CATCGTGGCTGCTGGGGCTGGAGTGACCCTGGGATTCTGGATCAACCATT	1	+	78413638-78413687	1qC4	Mus musculus sphingosine-1-phosphate phosphotase 2 (Sgpp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC59240; SPPase2; Spp2	MGC59240; SPPase2; Spp2
Mus musculus	MEEBO	ILMN_191134	ILMN_191134	EGFP	eGFP						eGFP		ILMN_2476405	005310220	S	8	TGGCCGACAAGCAGAAGAACGGCATCAAGGTGAACTTCAAGATCCGCCAC										
Mus musculus	RefSeq	ILMN_200268	ILMN_200268	LOC386112	XM_359073.1	XM_359073.1			38081157	XM_359073.1	LOC386112		ILMN_1238185	006330047	S	976	TGCCAGCCCAGGCTACTCTACCCAGCCAAACTCTCAATTACCATACATGG										
Mus musculus	RefSeq	ILMN_262077	ILMN_262077	9530015I07RIK	NM_001033813.1	NM_001033813.1		619310	85702144	NM_001033813.1	9530015I07Rik	NP_001028985.1	ILMN_2940939	004540100	S	2055	GTGGGAAACCATCAGTACTCTGCGCCTTCCAAACATGTGAAGAGGACCCT	9	+	21951620-21951669	9qA3	Mus musculus RIKEN cDNA 9530015I07 gene (9530015I07Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208849	ILMN_208849	3000004C01RIK	NM_197959.1	NM_197959.1		70218	37537559	NM_197959.1	3000004C01Rik	NP_932063.1	ILMN_2593631	002680010	S	3017	GGTTGCTGACAAATGCCGGCTTAGCTCTCCTGGTGCTAAACACAGCATAC	11	-	102767070-102767119	11qE1	Mus musculus RIKEN cDNA 3000004C01 gene (3000004C01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_208849	ILMN_208849	3000004C01RIK	NM_197959.1	NM_197959.1		70218	37537559	NM_197959.1	3000004C01Rik	NP_932063.1	ILMN_1221714	006350367	S	2795	GTCTATTTGCCTTCTTTATTAGTCTCTTTCACACTCAGCTTCTTGGTATA	11	-	102767292-102767341	11qE1	Mus musculus RIKEN cDNA 3000004C01 gene (3000004C01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_208849	ILMN_208849	3000004C01RIK	NM_197959.1	NM_197959.1		70218	37537559	NM_197959.1	3000004C01Rik	NP_932063.1	ILMN_2922942	001710368	S	2868	AACGTGTGGCTGTATTAAAGGATCCTGTCAGGGTTTCTCATTCCCAAAGC	11	-	102767219-102767268	11qE1	Mus musculus RIKEN cDNA 3000004C01 gene (3000004C01Rik), mRNA.					
Mus musculus	Riken	ILMN_203220	ILMN_203220	ASAH2	ri|B330020D04|PX00070P17|AK046540|4055					AK046540	Asah2		ILMN_2555632	001190369	S	3211	GAGAAGTGCTTGCTGGTCACATGCTAACTGTGTTGTTACATCTGAGGTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine [goid 17040] [evidence IDA]		
Mus musculus	RefSeq	ILMN_216466	ILMN_216466	SLC29A4	NM_146257.2	NM_146257.2		243328	134031958	NM_146257.2	Slc29a4	NP_666369.1	ILMN_1240973	001030482	S	2655	TTTGCTGAGCCGGGACACTTGCCTCTCCACACAGTGGCCCCAGCCGTGAC	5	+	143198309-143198358	5qG2	Mus musculus solute carrier family 29 (nucleoside transporters), member 4 (Slc29a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other [goid 5337] [evidence IEA]	MGC38048; mPMAT; ENT4	MGC38048; mPMAT; ENT4
Mus musculus	RefSeq	ILMN_196807	ILMN_216466	SLC29A4	NM_146257.2	NM_146257.2		243328	134031958	NM_146257.2	Slc29a4	NP_666369.1	ILMN_2525872	001440240	S	263	AGTGTGGTGACAAGCTTTAGCTTTGACAACTTCCAGCTGGAGACGACAGC	5	+	143181381-143181430	5qG2	Mus musculus solute carrier family 29 (nucleoside transporters), member 4 (Slc29a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other [goid 5337] [evidence IEA]	MGC38048; mPMAT; ENT4	MGC38048; mPMAT; ENT4
Mus musculus	RefSeq	ILMN_200426	ILMN_310776	LOC381707	XM_001476838.1	XM_001476838.1		381707	149254331	XM_001476838.1	LOC381707	XP_001476888.1	ILMN_1243223	006040719	S	349	GATCCCCGCCCGAGGACCCGCCCAGATTGTTTGGATTGACATGGGAGGAC				5qF	PREDICTED: Mus musculus hypothetical LOC381707 (LOC381707), mRNA.					
Mus musculus	RefSeq	ILMN_254941	ILMN_254941	ADAMTS16	NM_172053.2	NM_172053.2		271127	88196785	NM_172053.2	Adamts16	NP_742050.2	ILMN_2987834	003130450	S	4661	GGTGTCCCTGGAAAGTGAGGGTCCCCTGTAATAGAAATCAGTCAAGGGGC	13	-	70866949-70866998	13qC1	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16 (Adamts16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC37086	MGC37086
Mus musculus	RefSeq	ILMN_213398	ILMN_213398	PRODH	NM_011172.2	NM_011172.2		19125	118601003	NM_011172.2	Prodh	NP_035302.2	ILMN_2908406	004120400	S	1966	TGCCCAAGGCTTTTTATGCCCAAGGCGGGATTTCATCAGTGGACAGCTCC	16	-	18079328-18079343:18079280-18079313	16qA3	Mus musculus proline dehydrogenase (Prodh), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6560] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid [goid 6537] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6562] [evidence IEA]	Catalysis of the reaction: L-proline + acceptor = (S)-1-pyrroline-5-carboxylate + reduced acceptor [goid 4657] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Ym24d07; Pro1; MGC159030; Pro-1	Ym24d07; Pro1; MGC159030; Pro-1
Mus musculus	RefSeq	ILMN_197465	ILMN_197465	LOC277160	XM_204846.3	XM_204846.3			38076094	XM_204846.3	LOC277160		ILMN_1242436	002900196	S	586	TGACATCCAGTGTAGGGATGCTCAGATGCATCTTTGCGCCCAAGATCTAC										
Mus musculus	RefSeq	ILMN_194462	ILMN_313549	LOC100039499	XM_001472636.1	XM_001472636.1		100039499	149258315	XM_001472636.1	LOC100039499	XP_001472686.1	ILMN_2506628	004730450	S	1791	GGGGGAGCCATTACAGAGGGACAGTAAGGTCAAAACATGTCCAAACCCTG	7|NT_166307.1	-	149208-149257		PREDICTED: Mus musculus similar to pheromone receptor V3R1 (LOC100039499), mRNA.					
Mus musculus	RefSeq	ILMN_220381	ILMN_220381	8030462N17RIK	NM_178670.3	NM_178670.3		212163	87196344	NM_178670.3	8030462N17Rik	NP_848785.2	ILMN_2776187	004560750	S	1153	TTGGCGGCTGCAGTAGTTCAAGAGCACAGTAATTCAGTAGGCGGCCAGAA	18	-	77891908-77891957	18qE3	Mus musculus RIKEN cDNA 8030462N17 gene (8030462N17Rik), mRNA.				Akd2	Akd2
Mus musculus	RefSeq	ILMN_220381	ILMN_220381	8030462N17RIK	NM_178670.3	NM_178670.3		212163	87196344	NM_178670.3	8030462N17Rik	NP_848785.2	ILMN_2963017	006220086	S	3113	GTGCTCGATGATGTTGTCTGGCGTAATCTCATTTGACCTGCCCTCTGCTC	18	-	77872275-77872324	18qE3	Mus musculus RIKEN cDNA 8030462N17 gene (8030462N17Rik), mRNA.				Akd2	Akd2
Mus musculus	MEEBO	ILMN_188053	ILMN_188053	PWWP2	scl0101631.1_186				51762656	XM_133936	Pwwp2		ILMN_2449403	006650338	S	11	CACCCTGTGTAGTTGTCAAGGGACCTATGCCTGACCGTGAAAGGTGACGT										
Mus musculus	RefSeq	ILMN_216854	ILMN_315542	LOC100044971	XM_001473425.1	XM_001473425.1		100044971	149266252	XM_001473425.1	LOC100044971	XP_001473475.1	ILMN_2676144	006450209	S	1432	ATCGCCGCGCCCGAGAAGCGCTCCCTCGAGGCCTATTTTGCCGTACAACC					PREDICTED: Mus musculus similar to POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0) (LOC100044971), mRNA.					
Mus musculus	MEEBO	ILMN_194482	ILMN_194482	AV028368	scl23491.13_4				31343601	NM_177672	AV028368		ILMN_2606973	006400446	S	3401	CGCCCAGTGCAAGCCCGTGTCATGTAGTAGATTGTGATTGTCCAGCGACC										
Mus musculus	RefSeq	ILMN_213037	ILMN_236358	2310016G11RIK	XM_001003421.1	XM_001003421.1		69578	94380312	XM_001003421.1	2310016G11Rik	XP_001003421.1	ILMN_1253948	004780603	S	659	GCATATCTAGGGGACAATCCGGTCACACTGAGAGGTCAAGTAGGGTTTCC					PREDICTED: Mus musculus RIKEN cDNA 2310016G11 gene (2310016G11Rik), mRNA.					
Mus musculus	Riken	ILMN_206466	ILMN_206466	D330022A01RIK	ri|D330022A01|PX00191F06|AK084619|1312					AK084619	D330022A01Rik		ILMN_1256677	006040202	S	1182	AGACTGTTCCTGCTTGGCAGCAAAGGCCTGAGCCAACTCACAGGTTTTTC										
Mus musculus	MEEBO	ILMN_190300	ILMN_190300	AB041806	scl24790.2.1_162						AB041806		ILMN_2468925	004830192	S	15	TGGGCCCCAGGTCCCACGGCTTTAAGGCTCTCTATTGCCAACACGAGTTA										
Mus musculus	RefSeq	ILMN_196975	ILMN_315901	LOC100039062	XM_001472023.1	XM_001472023.1		100039062	149263215	XM_001472023.1	LOC100039062	XP_001472073.1	ILMN_1254923	000360450	S	1196	CCCCACCAACTGTAAGCATGGGGTGGTCTGCACCTAGCATGGCCTCTCAT	12	+	45324207-45324256	12qB3	PREDICTED: Mus musculus hypothetical protein LOC100039062 (LOC100039062), mRNA.					
Mus musculus	Riken	ILMN_203860	ILMN_203860	SAMSN1	ri|A630021E24|PX00144H06|AK041566|1682					AK041566	Samsn1		ILMN_1222268	005720427	S	983	CTCCCATATCAGTGAATGAGTAGCCTCTTCTACATCACGTCAGCCTGAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]		Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence ISO]		
Mus musculus	RefSeq	ILMN_196645	ILMN_236619	LOC630146	XM_973806.1	XM_973806.1		630146	94370220	XM_973806.1	LOC630146	XP_978900.1	ILMN_1229081	000020433	S	2610	TGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCATGGAGGATGA				3qF2.2	PREDICTED: Mus musculus similar to immunoglobulin superfamily, member 2 (LOC630146), mRNA.					
Mus musculus	RefSeq	ILMN_190189	ILMN_190189	TPD52L2	NM_025482.2	NM_025482.2		66314	31560246	NM_025482.2	Tpd52l2	NP_079758.2	ILMN_1250767	001990017	S	2203	GCTGTGTGAGGGAACACATTACAGGAGTGTAGGTCACTGATATATCTTCC	2	+	181251359-181251408	2qH4	Mus musculus tumor protein D52-like 2 (Tpd52l2), mRNA.				AU016537; D54; C86069; 2810411G23Rik	AU016537; D54; C86069; 2810411G23Rik
Mus musculus	RefSeq	ILMN_212354	ILMN_212354	PDCD4	NM_011050.2	NM_011050.2		18569	110625655	NM_011050.2	Pdcd4	NP_035180.2	ILMN_2898878	003990630	S	293	TGGATATAGAAAATGAGCAGACACTGAATGTGAACCCCACTGACCCTGAC				19qD2	Mus musculus programmed cell death 4 (Pdcd4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MA-3; D19Ucla1; TIS	MA-3; D19Ucla1; TIS
Mus musculus	RefSeq	ILMN_195546	ILMN_236294	SUSD4	NM_144796.4	NM_144796.4		96935	146149081	NM_144796.4	Susd4	NP_659045.2	ILMN_2677824	000010348	S	1723	GACAGTGATTCATACCGTACATCTCCAGCAGGACTGTGGGTCTGGCCAAC				1qH5	Mus musculus sushi domain containing 4 (Susd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			N28096; E430021N18Rik; AI848994; MGC30368	N28096; E430021N18Rik; AI848994; MGC30368
Mus musculus	RefSeq	ILMN_197851	ILMN_315585	FAM131C	NM_001085513.1	NM_001085513.1		277743	148222951	NM_001085513.1	Fam131c	NP_001078982.1	ILMN_1227306	003130725	S	1080	CAGGACTCTAAGCAGACACCAGGGCAACCAGCCCCAGGAGAGCTGACAGT				4qE1	Mus musculus family with sequence similarity 131, member C (Fam131c), mRNA.					
Mus musculus	RefSeq	ILMN_218068	ILMN_218068	DCTN1	NM_007835.2	NM_007835.2		13191	118601016	NM_007835.2	Dctn1	NP_031861.2	ILMN_2691157	002900154	S	585	GCAGATACTACTTCCCCAGAGACTCCTGATTCTTCTGCTTCAAAGGTCCT	6	+	83128051-83128100	6qC3	Mus musculus dynactin 1 (Dctn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Glued; p150; AL022633	Glued; p150; AL022633
Mus musculus	RefSeq	ILMN_188937	ILMN_188937	PARP12	NM_172893.2	NM_172893.2		243771	141802986	NM_172893.2	Parp12	NP_766481.1	ILMN_1228913	001340050	S	2646	GGCCCGACTTGAAGCCACAATCTTAATCCTTGTCTGATAACAGTTTTAGG	6	-	39036944-39036993	6qB1	Mus musculus poly (ADP-ribose) polymerase family, member 12 (Parp12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zc3hdc1; 9930021O16; AA536654; PARP-12; AA409132	Zc3hdc1; 9930021O16; AA536654; PARP-12; AA409132
Mus musculus	RefSeq	ILMN_217727	ILMN_262062	5430427O19RIK	XM_912450.2	XM_912450.2		71398	94407875	XM_912450.2	5430427O19Rik	XP_917543.1	ILMN_2686825	000460368	S	1058	CATAGAGAAGGCTCCTGTCAATTCCCCTTATTCCTATGAATCCCAAGGCA				XqC1	PREDICTED: Mus musculus RIKEN cDNA 5430427O19 gene, transcript variant 3 (5430427O19Rik), mRNA.					
Mus musculus	MEEBO	ILMN_196012	ILMN_196012	MEF2C	scl0108828.1_6				13384623	NM_025282	Mef2c		ILMN_2520812	000670445	S	5	CCCTTCGAAGAGTAAATGCTTTGTATTTCTTTCTTTAAAAAATTTACTTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211276	ILMN_211276	2300006N05RIK	NM_027087.1	NM_027087.1		69464	13386197	NM_027087.1	2300006N05Rik	NP_081363.1	ILMN_2614202	003400326	S	735	TTTGAGCATTCTAATCTCTCATAAAATGTGTTCTGTGCTATATTAAAAAA	11	-	99625202-99625251	11qD	Mus musculus RIKEN cDNA 2300006N05 gene (2300006N05Rik), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211276	ILMN_211276	2300006N05RIK	NM_027087.1	NM_027087.1		69464	13386197	NM_027087.1	2300006N05Rik	NP_081363.1	ILMN_2934917	003140327	S	419	GCTGTGGTAGTTCCAGCTGTTGTGTGTCCAGCTGTTGCAGACCCCAGTGC	11	-	99625518-99625567	11qD	Mus musculus RIKEN cDNA 2300006N05 gene (2300006N05Rik), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_255913	ILMN_255913	TRY10	NM_001038996.1	NM_001038996.1		436522	84781770	NM_001038996.1	Try10	NP_001034085.1	ILMN_2881083	002510523	S	197	AGTCCCGCATCCAAGTGAGACTGGGAGAGCACAACATCAACGTCCTGGAG	6	+	41305277-41305320:41305451-41305456	6qB1	Mus musculus trypsin 10 (Try10), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_234692	ILMN_234692	TCF3	NM_001079822.1	NM_001079822.1		21415	119703757	NM_001079822.1	Tcf3	NP_001073290.1	ILMN_3109289	003120500	A	2532	CTCTGCTGCCCAGTCACGTTTTCTTTCCCGCCTCGCAGTATCAGAGTGGC	6	-	72576576-72576625	6qC1	Mus musculus transcription factor 3 (Tcf3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter during mitosis [goid 46022] [evidence IDA]; The process by which the anatomical structures of the axial mesoderm are generated and organized. Morphogenesis pertains to the creation of form [goid 48319] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells [goid 48863] [evidence IMP]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Tcf7l1; Tcf-3	Tcf7l1; Tcf-3
Mus musculus	RefSeq	ILMN_211548	ILMN_211548	RAPSN	NM_009023.1	NM_009023.1		19400	6677668	NM_009023.1	Rapsn	NP_033049.1	ILMN_2967654	007200348	S	1316	TTCATCTCAGATGCCTGCAAAACAATGGCACTAGGAGCTGCCCCAACTGC	2	+	90845870-90845878:90846285-90846325	2qE1	Mus musculus receptor-associated protein of the synapse (Rapsn), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an acetylcholine receptor [goid 33130] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC130501; Raps; Nraps; 43kDa; rapsyn	MGC130501; Raps; Nraps; 43kDa; rapsyn
Mus musculus	RefSeq	ILMN_206230	ILMN_258199	THUMPD1	XM_989710.1	XM_989710.1		233802	94381226	XM_989710.1	Thumpd1	XP_994804.1	ILMN_1223740	002360368	S	1004	CGGTGCTCTGTGTGCTGGGATTCTTTCCCAACTGAGAGCTGGACTTCTGT				7qF2	PREDICTED: Mus musculus THUMP domain containing 1, transcript variant 3 (Thumpd1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_216350	ILMN_240648	4931429I11RIK	NM_001081121.1	NM_001081121.1		70989	124487448	NM_001081121.1	4931429I11Rik	NP_001074590.1	ILMN_1254314	003940767	S	2372	CGTCTAGACAGCGTTTAGTGGGGATCAAAAGTGCTATGCAAGGGACATGG	9	-	40703578-40703621:40703622-40703627	9qA5.1	Mus musculus RIKEN cDNA 4931429I11 gene (4931429I11Rik), mRNA.				BB239335	BB239335
Mus musculus	RefSeq	ILMN_217494	ILMN_217494	ATP1B3	NM_007502.3	NM_007502.3		11933	145966742	NM_007502.3	Atp1b3	NP_031528.1	ILMN_1240702	004480603	S	1598	GGGCTGACTTTGAGTGTTGGAATCAAGTCTTCCACATTCGGGTATCTTAG				9qE3.3	Mus musculus ATPase, Na+/K+ transporting, beta 3 polypeptide (Atp1b3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW212096; AI664000; AA409958	AW212096; AI664000; AA409958
Mus musculus	Riken	ILMN_205289	ILMN_205289	4832404P21RIK	ri|4832404P21|PX00313G12|AK029263|2802					AK029263	4832404P21Rik		ILMN_1226855	003360327	S	2508	GGGGCACAAGATTGGTGAACTTAGAATCCCTCCCTGCCACGTGTGGTGGC										
Mus musculus	RefSeq	ILMN_201149	ILMN_318346	A530010L16RIK	XM_001480158.1	XM_001480158.1		382036	149259372	XM_001480158.1	A530010L16Rik	XP_001480208.1	ILMN_1240639	006130307	S	481	GTCCATGGCTCTGTGACTCCTGCTATGAAGTGCCCTGAGAACAGCCGTCC				8qE1	PREDICTED: Mus musculus RIKEN cDNA A530010L16 gene (A530010L16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196327	ILMN_196327	SLFN9	NM_172796.2	NM_172796.2		237886	116089295	NM_172796.2	Slfn9	NP_766384.2	ILMN_1249005	003890075	S	3505	CACACCTGGAACTCTCAGAACACAGGAACCAAATCACATGAGGCAACAGC	11	-	82794106-82794155	11qC	Mus musculus schlafen 9 (Slfn9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	9830137M10Rik	9830137M10Rik
Mus musculus	RefSeq	ILMN_196327	ILMN_196327	SLFN9	NM_172796.2	NM_172796.2		237886	116089295	NM_172796.2	Slfn9	NP_766384.2	ILMN_2609979	003450341	S	3066	ATAAAGATATAACAAAACCTTGTTCTGTAGTTTTGACAAATGTAGGAAAA	11	-	82794545-82794594	11qC	Mus musculus schlafen 9 (Slfn9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	9830137M10Rik	9830137M10Rik
Mus musculus	RefSeq	ILMN_196327	ILMN_196327	SLFN9	NM_172796.2	NM_172796.2		237886	116089295	NM_172796.2	Slfn9	NP_766384.2	ILMN_2688948	000630315	S	3316	TGAAAATATTGTATAAGGATAAAGATAAAGACTAAAAACATAATATTAAG	11	-	82794295-82794344	11qC	Mus musculus schlafen 9 (Slfn9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	9830137M10Rik	9830137M10Rik
Mus musculus	MEEBO	ILMN_185507	ILMN_185507	IGKV6-13_J00569_IG_KAPPA_VARIABLE_6-13_23	IGKV6-13_J00569_Ig_kappa_variable_6-13_23						IGKV6-13_J00569_Ig_kappa_variable_6-13_23		ILMN_1233458	005130025	S	1	CAGACCAGCATGGGCTTCAAGATGGAGTCTCATACTCAAGTGTATACTCA										
Mus musculus	Riken	ILMN_202183	ILMN_202183	ARHGEF6	ri|1700038J06|ZX00074O06|AK006635|1612					AK006635	Arhgef6		ILMN_1218024	002100681	S	1557	CTGAGCACAGTGCCTTCAGCACTCCTTAAAGTGGCCAGCTGAATGGTTCA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Mus musculus	Riken	ILMN_206076	ILMN_206076	USP9X	ri|E130006I06|PX00207D12|AK053279|1622					AK053279	Usp9x		ILMN_1215897	002940524	S	776	CAGGTAAGATGAGCAAGGATAACAGAAGTAACAGGAGCCAAAGTATGGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_222967	ILMN_250301	SPAM1	NM_001079875.1	NM_001079875.1		20690	120407034	NM_001079875.1	Spam1	NP_001073344.1	ILMN_2757408	006200132	S	1901	GCAGGCCTCAGTAATTTGGGATTATGAATGGGATTCTATTTTACCAAAGT	6	+	24750847-24750896	6qA3.1	Mus musculus sperm adhesion molecule 1 (Spam1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [evidence IEA]; The union of male and female gametes to form a zygote [goid 7338] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [evidence IMP]; Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [evidence IDA]	Ph-20; AV039194	Ph-20; AV039194
Mus musculus	RefSeq	ILMN_250301	ILMN_250301	SPAM1	NM_001079875.1	NM_001079875.1		20690	120407034	NM_001079875.1	Spam1	NP_001073344.1	ILMN_3152309	000070168	A	1825	TTCCACGGAAGACACTAGTCAGTACTCCTTAGTTTTCTCTACCCACAGCG	6	+	24750771-24750802:24750803-24750820	6qA3.1	Mus musculus sperm adhesion molecule 1 (Spam1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [evidence IEA]; The union of male and female gametes to form a zygote [goid 7338] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [evidence IMP]; Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [evidence IDA]	Ph-20; AV039194	Ph-20; AV039194
Mus musculus	RefSeq	ILMN_211734	ILMN_211734	EPB4.1L3	NM_013813.1	NM_013813.1		13823	7305030	NM_013813.1	Epb4.1l3	NP_038841.1	ILMN_1244272	000510041	S	3972	CACTGTCAACTGTGTCACAGCCCGTCGTGAATGATGTCACCGCATCTCGA	17	+	69639254-69639303	17qE1.3	Mus musculus erythrocyte protein band 4.1-like 3 (Epb4.1l3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	NBL3; Dal1; 4.1B	NBL3; Dal1; 4.1B
Mus musculus	RefSeq	ILMN_211734	ILMN_211734	EPB4.1L3	NM_013813.1	NM_013813.1		13823	7305030	NM_013813.1	Epb4.1l3	NP_038841.1	ILMN_1242244	000270091	S	2037	GTCTGCGCGGAAACCCACAGAGTTCATAGGAGGGGTTTCGTCTACTACCC	17	+	69633283-69633332	17qE1.3	Mus musculus erythrocyte protein band 4.1-like 3 (Epb4.1l3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	NBL3; Dal1; 4.1B	NBL3; Dal1; 4.1B
Mus musculus	RefSeq	ILMN_211734	ILMN_211734	EPB4.1L3	NM_013813.1	NM_013813.1		13823	7305030	NM_013813.1	Epb4.1l3	NP_038841.1	ILMN_2618996	006760189	S	2043	CGCGGAAACCCACAGAGTTCATAGGAGGGGTTTCGTCTACTACCCAGAGC	17	+	69633289-69633338	17qE1.3	Mus musculus erythrocyte protein band 4.1-like 3 (Epb4.1l3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	NBL3; Dal1; 4.1B	NBL3; Dal1; 4.1B
Mus musculus	RefSeq	ILMN_199767	ILMN_199767	LOC383912	XM_357319.1	XM_357319.1			38077013	XM_357319.1	LOC383912		ILMN_1232614	002680762	S	38	CAGCCGAGGACAGACTCAGGGCAGATGCAAAGAAATACACACCCAAGAGA										
Mus musculus	RefSeq	ILMN_199198	ILMN_199198	LOC380720	XM_358409.1	XM_358409.1			38091767	XM_358409.1	LOC380720		ILMN_2534393	006330402	S	404	AACAGCAACAAGCAGGTAGCAGCCGCACCCCACCTCCCCCCAACTCACTT										
Mus musculus	RefSeq	ILMN_220888	ILMN_220888	RCAN2	NM_207649.1	NM_207649.1		53901	46560586	NM_207649.1	Rcan2	NP_997532.1	ILMN_3106592	004850612	A	3163	GGAAGCCACGGGACCTCCCAGCATCGAGAAAGTCACCTGGACACTTCCAT	17	+	44176265-44176314	17qB3	Mus musculus regulator of calcineurin 2 (Rcan2), transcript variant 1, mRNA.		A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IEA]		MCIP2; ZAKI-4; Csp2; Dscr1l1	MCIP2; ZAKI-4; Csp2; Dscr1l1
Mus musculus	RefSeq	ILMN_220888	ILMN_220888	RCAN2	NM_207649.1	NM_207649.1		53901	46560586	NM_207649.1	Rcan2	NP_997532.1	ILMN_1212612	006110392	S	2724	GGCCATGGAAAGACTAGAAATAGTGGCGAGATGATGCCCTCTCGTGGCAG	17	+	44175826-44175875	17qB3	Mus musculus regulator of calcineurin 2 (Rcan2), transcript variant 1, mRNA.		A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IEA]		MCIP2; ZAKI-4; Csp2; Dscr1l1	MCIP2; ZAKI-4; Csp2; Dscr1l1
Mus musculus	RefSeq	ILMN_220888	ILMN_220888	RCAN2	NM_207649.1	NM_207649.1		53901	46560586	NM_207649.1	Rcan2	NP_997532.1	ILMN_3033007	000610543	I	342	GACAGAGACTGGGCTGTCACTCAGTGTTTTGCTGAAGAGGCCTTCCAAGC	17	+	43973315-43973364	17qB3	Mus musculus regulator of calcineurin 2 (Rcan2), transcript variant 1, mRNA.		A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IEA]		MCIP2; ZAKI-4; Csp2; Dscr1l1	MCIP2; ZAKI-4; Csp2; Dscr1l1
Mus musculus	Riken	ILMN_203479	ILMN_203479	6430524C05RIK	ri|6430524C05|PX00046M05|AK032347|2976					AK032347	6430524C05Rik		ILMN_1252827	004880762	S	2613	GTAAGCAATACCAGCTGTATTTGGGATGCAGGCGTGTGGTACAGTTTTCC										
Mus musculus	RefSeq	ILMN_212929	ILMN_232548	9030624G23RIK	XM_001003228.1	XM_001003228.1		66808	94392513	XM_001003228.1	9030624G23Rik	XP_001003228.1	ILMN_1224252	006040398	S	1066	GGCCATTCCTCTGCCCAATTGCTACCTGGTGTACTAAAGGACTGTATGTC	12	-	24729196-24729245	12qA1.3	PREDICTED: Mus musculus RIKEN cDNA 9030624G23 gene (9030624G23Rik), mRNA.					
Mus musculus	Riken	ILMN_202574	ILMN_202574	ADCY7	ri|2700055K03|ZX00082N19|AK012436|937					AK012436	Adcy7		ILMN_1221530	005420082	S	615	GATGCCTGCCGGGAGCAACATCTCCTTCCTTTGTGAACTGCTAGGTGGGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS]		
Mus musculus	RefSeq	ILMN_258913	ILMN_258913	IZUMO1	NM_001018013.1	NM_001018013.1		73456	65301150	NM_001018013.1	Izumo1	NP_001018013.1	ILMN_2881054	001980369	S	1146	CGGAGCTGCACCCAGAGTTGTACCCGGAGCTCATACCTACAGTCGCTCAA	7	+	52881519-52881568	7qB4	Mus musculus izumo sperm-egg fusion 1 (Izumo1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IC ]; The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [evidence IDA]		Izumo; 1700058F15Rik	Izumo; 1700058F15Rik
Mus musculus	RefSeq	ILMN_200099	ILMN_200099	LOC381666	XM_355632.1	XM_355632.1			38080364	XM_355632.1	LOC381666		ILMN_2537590	007160470	S	246	GCAGGGAGACGAAGCAGGAACTCCAGAAAGCCAGCTGCATATTTCGCATC										
Mus musculus	MEEBO	ILMN_186676	ILMN_186676	SCL0004175.1_57	scl0004175.1_57	BC026739.1			20073216	BC026739.1	scl0004175.1_57		ILMN_2437558	005390491	S	17	CCCTCTCTAACACGGACAGTCCTCCCATGGATTCATTCTTAGTGAATGTG										
Mus musculus	MEEBO	ILMN_187658	ILMN_187658	ZFP37	scl24268.3_61				47059079	NM_009554	Zfp37		ILMN_2479899	000150088	S	4	GGAAGAAGATTAATGTAGGAAACCTGACGAACTGACTGGTTTGGTATTAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence TAS]		
Mus musculus	MEEBO	ILMN_218114	ILMN_218114	GPR143	scl54538.9.1_0	NM_010951.2			31982776	NM_010951.2	Gpr143		ILMN_2691820	003170048	S	1214	AACTGGGTCCTGCAACATAAAGGAAGTTGACTCCATTTCCCAAGCCCAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_184871	ILMN_251231	AKT2	NM_007434.2	NM_007434.2		11652	27312021	NM_007434.2	Akt2	NP_031460.1	ILMN_2655895	000070612	S	20	CCGCTGAAAGGAGACTGTAAAAAGTGGCTCTGGTGTGTGGAGCTGTGGCC	7	+	28390896-28390945	7qA3	Mus musculus thymoma viral proto-oncogene 2 (Akt2), mRNA. XM_922081 XM_922090 XM_922098 XM_922105 XM_922113 XM_922119	A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PKBbeta; 2410016A19Rik; AW554154; MGC14031; PKB	PKBbeta; 2410016A19Rik; AW554154; MGC14031; PKB
Mus musculus	RefSeq	ILMN_197355	ILMN_197355	LOC279056	XM_205091.2	XM_205091.2			38075311	XM_205091.2	LOC279056		ILMN_1221951	005080739	S	1381	GATGAAGGACAGCCAGACACACAATTAAGCCAGCAAGACCCAGGGAGCTG										
Mus musculus	RefSeq	ILMN_223495	ILMN_223495	ANKS1	NM_181413.3	NM_181413.3		224650	118130667	NM_181413.3	Anks1	NP_852078.1	ILMN_1220446	003390112	S	5123	AGAAATTCCTCTCCTCCTCCGGGTGGGTCTCTCCTTTTCAGGACAAGTGC	17	+	28184639-28184688	17qA3.3	Mus musculus ankyrin repeat and SAM domain containing 1 (Anks1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC59413; mKIAA0229	MGC59413; mKIAA0229
Mus musculus	RefSeq	ILMN_209427	ILMN_209427	MOBKL3	NM_025283.3	NM_025283.3		19070	125347251	NM_025283.3	Mobkl3	NP_079559.2	ILMN_2595686	005820044	S	1782	GACTATTTACAATAATTCACAGGTTAAGTGGTGTTGATAAGTGGTCATAC	1	+	55210699-55210748	1qC1.2	Mus musculus MOB1, Mps One Binder kinase activator-like 3 (yeast) (Mobkl3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2610109B12Rik; Prei3	2610109B12Rik; Prei3
Mus musculus	RefSeq	ILMN_209427	ILMN_209427	MOBKL3	NM_025283.3	NM_025283.3		19070	125347251	NM_025283.3	Mobkl3	NP_079559.2	ILMN_2776910	001230592	S	46	CTCTGGCACTATGGTCATGGCGGAGGGGACGGCAGTGCTGAGGCGGAACA	1	+	55188134-55188143:55188144-55188183	1qC1.2	Mus musculus MOB1, Mps One Binder kinase activator-like 3 (yeast) (Mobkl3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2610109B12Rik; Prei3	2610109B12Rik; Prei3
Mus musculus	MEEBO	ILMN_193591	ILMN_193591	ZFP339	scl18575.5_47	NM_026924.2			23308704	NM_026924.2	Zfp339		ILMN_2498591	000270682	S	19	AGAGAGAGGTGTTCTTAAAGAGACTGTCATCTTAAGGTGCCTTGAAATGC										
Mus musculus	RefSeq	ILMN_214043	ILMN_214043	OLFR143	NM_146806.2	NM_146806.2		258802	121583730	NM_146806.2	Olfr143	NP_667017.2	ILMN_2643605	003610608	S	610	GTTGTGGTAGGTTCAGCTATCATTTTATGCTGCCTCATTATTTTAATCTC	9	+	38061613-38061662	9qA5.1	Mus musculus olfactory receptor 143 (Olfr143), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	K18; MOR170-6	K18; MOR170-6
Mus musculus	RefSeq	ILMN_209184	ILMN_209184	ACTR6	NM_025914.2	NM_025914.2		67019	142361108	NM_025914.2	Actr6	NP_080190.1	ILMN_2593338	005560110	S	1122	CACTTACTCCTGGGAAGGTGGGAAGTTGATATCTGAAAACGATGACTTTG	10	-	89175249-89175298	10qC2	Mus musculus ARP6 actin-related protein 6 homolog (yeast) (Actr6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU044443; CDA12; 2010200J04Rik; ArpX; Arp6	AU044443; CDA12; 2010200J04Rik; ArpX; Arp6
Mus musculus	MEEBO	ILMN_213351	ILMN_213351	SYNE1	scl0064009.1_89				19526754	NM_022027	Syne1		ILMN_2636200	003180113	S	2874	TTTGCCCGATCCTTCCATCCGATGCTCAGATATACCAACGGTCCTCCTCC						The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_188083	ILMN_188083	2900003A17RIK	scl072877.1_170						2900003A17Rik		ILMN_2449674	000770286	S	14	TCACAGGCTCTGTAGAATGCCAGGGGCTCACTCTCCCATGCTGCCATTGC										
Mus musculus	RefSeq	ILMN_223110	ILMN_223110	NKX3-1	NM_010921.1	NM_010921.1		18095	7110672	NM_010921.1	Nkx3-1	NP_035051.1	ILMN_2759490	002810731	S	2868	TACTGGAACTACCCATTCACCCACACCTGAACTGGTAGAAACGTGGCCTG	14	+	68147719-68147768	14qD2	Mus musculus NK-3 transcription factor, locus 1 (Drosophila) (Nkx3-1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity [goid 7431] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	NKX3A; Bax; bagpipe; NKX3.1; Nkx-3.1	NKX3A; Bax; bagpipe; NKX3.1; Nkx-3.1
Mus musculus	RefSeq	ILMN_193207	ILMN_219211	SIDT2	NM_172257.3	NM_172257.3		214597	146149326	NM_172257.3	Sidt2	NP_758461.1	ILMN_2494996	004120112	S	2729	GGTCATCAAAGAAGTCGAGGAGGATGCAGTCGCGGTTGTGCTCCCTGGAC				9qA5.2	Mus musculus SID1 transmembrane family, member 2 (Sidt2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC36407; CGI-40; MGC58967; BC023957; B930096O19	MGC36407; CGI-40; MGC58967; BC023957; B930096O19
Mus musculus	RefSeq	ILMN_219211	ILMN_219211	SIDT2	NM_172257.3	NM_172257.3		214597	146149326	NM_172257.3	Sidt2	NP_758461.1	ILMN_1258738	004070019	S	3861	CCGTCCAGTATTTAGCCAAGTTCTGTGTTAGTCACGTAGGCCTAAGAGCC				9qA5.2	Mus musculus SID1 transmembrane family, member 2 (Sidt2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC36407; CGI-40; MGC58967; BC023957; B930096O19	MGC36407; CGI-40; MGC58967; BC023957; B930096O19
Mus musculus	RefSeq	ILMN_219211	ILMN_219211	SIDT2	NM_172257.3	NM_172257.3		214597	146149326	NM_172257.3	Sidt2	NP_758461.1	ILMN_2732859	004180086	S	2683	CAGGGAGCACAACCGCGACTGCATCCTCCTCGACTTCTTTGATGACCACG				9qA5.2	Mus musculus SID1 transmembrane family, member 2 (Sidt2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC36407; CGI-40; MGC58967; BC023957; B930096O19	MGC36407; CGI-40; MGC58967; BC023957; B930096O19
Mus musculus	RefSeq	ILMN_197125	ILMN_197125	LOC229274	XM_124040.3	XM_124040.3			38074193	XM_124040.3	LOC229274		ILMN_2527000	002360328	S	567	CCCTTTTGGCATGACTGAGGAGGCTATGATGGACTTCTTCGACGCCCAAA										
Mus musculus	Riken	ILMN_202465	ILMN_202465	5033423K11RIK	ri|5033423K11|PX00037L12|AK017188|1164					AK017188	5033423K11Rik		ILMN_1251308	002190433	S	610	GGCGAGGTCAGAGACTCAACATTGGGACAAGTTCAACACCAGGCACTGAG										
Mus musculus	RefSeq	ILMN_194968	ILMN_255435	PLCXD3	NM_177355.2	NM_177355.2		239318	31340686	NM_177355.2	Plcxd3	NP_796329.1	ILMN_2701712	002680543	S	3984	GTTTGAGGCTTATGTATATGAAATAGTAGAGCTGTGCCCCCAAAGGGGGG	15	+	4470186-4470235	15qA1	Mus musculus phosphatidylinositol-specific phospholipase C, X domain containing 3 (Plcxd3), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]	B130016O10Rik	B130016O10Rik
Mus musculus	RefSeq	ILMN_194898	ILMN_230184	PFAS	XM_908501.3	XM_908501.3		237823	149262172	XM_908501.3	Pfas	XP_913594.1	ILMN_1259612	000540168	S	3916	GGATCTCCAGGGGGCATAGCTGGTATCTGTTCCCAAGATGGCCGACACCT				11qB3	PREDICTED: Mus musculus phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) (Pfas), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + 5'-phosphoribosylformylglycinamide + L-glutamine + H2O = ADP + phosphate + 5'-phosphoribosylformylglycinamidine + L-glutamate [goid 4642] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194898	ILMN_230184	PFAS	XM_908501.3	XM_908501.3		237823	149262172	XM_908501.3	Pfas	XP_913594.1	ILMN_1242920	005260603	S	5525	GCTTCCTACTTACTTGTACGGTAGACTCGGGTAGCCCCCTAAGAAGCTCG				11qB3	PREDICTED: Mus musculus phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) (Pfas), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + 5'-phosphoribosylformylglycinamide + L-glutamine + H2O = ADP + phosphate + 5'-phosphoribosylformylglycinamidine + L-glutamate [goid 4642] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218675	ILMN_218675	AIFM1	NM_012019.2	NM_012019.2		26926	31981322	NM_012019.2	Aifm1	NP_036149.1	ILMN_1230095	001010600	S	1914	TTCATGAAGATTGAATCCCAATCGTGGAATACACAAGCACTTTTCCATCC	X	-	45828257-45828293:45828294-45828306	XqA4	Mus musculus apoptosis-inducing factor, mitochondrion-associated 1 (Aifm1), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence TAS]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence TAS]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: reduced ETF + ubiquinone = ETF + ubiquinol [goid 4174] [evidence TAS]	Hq; AIFsh2; mAIF; Pdcd8; MGC5706; AIF	Hq; AIFsh2; mAIF; Pdcd8; MGC5706; AIF
Mus musculus	RefSeq	ILMN_218675	ILMN_218675	AIFM1	NM_012019.2	NM_012019.2		26926	31981322	NM_012019.2	Aifm1	NP_036149.1	ILMN_2881263	002470431	S	1744	CCCTGTTGAAGGGGAGGACTACGGCAAAGGTGTCATCTTCTACCTCAGGG	X	-	45828801-45828850	XqA4	Mus musculus apoptosis-inducing factor, mitochondrion-associated 1 (Aifm1), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence TAS]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence TAS]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: reduced ETF + ubiquinone = ETF + ubiquinol [goid 4174] [evidence TAS]	Hq; AIFsh2; mAIF; Pdcd8; MGC5706; AIF	Hq; AIFsh2; mAIF; Pdcd8; MGC5706; AIF
Mus musculus	RefSeq	ILMN_218675	ILMN_218675	AIFM1	NM_012019.2	NM_012019.2		26926	31981322	NM_012019.2	Aifm1	NP_036149.1	ILMN_2881272	001770672	S	1998	TCAGCATACATTTTCTTTATGTAGGAGCAGGAATCGAACAAGCCTCTGTG	X	-	45828173-45828222	XqA4	Mus musculus apoptosis-inducing factor, mitochondrion-associated 1 (Aifm1), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence TAS]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence TAS]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: reduced ETF + ubiquinone = ETF + ubiquinol [goid 4174] [evidence TAS]	Hq; AIFsh2; mAIF; Pdcd8; MGC5706; AIF	Hq; AIFsh2; mAIF; Pdcd8; MGC5706; AIF
Mus musculus	Riken	ILMN_206865	ILMN_206865	D930029H24RIK	ri|D930029H24|PX00202C14|AK086447|752					AK086447	D930029H24Rik		ILMN_1228871	001090746	S	290	GAGCTCACGTGGTGCTGACCTGCTGACTGCTCTTTCAATGAATTGGCATC										
Mus musculus	RefSeq	ILMN_209343	ILMN_209343	MED26	NM_027485.2	NM_027485.2		70625	142350326	NM_027485.2	Med26	NP_081761.1	ILMN_2594899	001470681	S	2782	CTAGGGAAGAGCCGTCTGTTGGCTGGAAACACTCATAACCATTCCTTTAG	8	-	75018625-75018674	8qB3.3	Mus musculus mediator complex subunit 26 (Med26), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI414941; AW495270; Crsp7; 5730493L18Rik	AI414941; AW495270; Crsp7; 5730493L18Rik
Mus musculus	Riken	ILMN_204166	ILMN_204166	CPT1A	ri|C730027G07|PX00087O10|AK050213|1585					AK050213	Cpt1a		ILMN_1213487	005960255	S	310	GAGTACTTCGATTCCGTTGCTTTTGGGCGCAGAGACTTGAATCCAGGACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine [goid 4095] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216136	ILMN_216136	FAM134A	NM_170755.2	NM_170755.2		227298	124248547	NM_170755.2	Fam134a	NP_739561.2	ILMN_1213426	004830066	S	2482	CCCTGCTAGGGTGTAAAGTGGATAGTAAGATCTGTGTAGGTGTTAACTGG	1	+	75144408-75144457	1qC3	Mus musculus family with sequence similarity 134, member A (Fam134a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC47289	MGC47289
Mus musculus	RefSeq	ILMN_216706	ILMN_216706	CD38	NM_007646.3	NM_007646.3		12494	142388510	NM_007646.3	Cd38	NP_031672.2	ILMN_2674247	002600181	S	2915	ACTTGCTCCCTTACAATATGTTGATGGTTCAGTCCATTAAATGCTTACTT	5	+	44303556-44303605	5qB3	Mus musculus CD38 antigen (Cd38), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose [goid 3953] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IMP];  [goid 16849] [evidence IMP]	Cd38-rs1	Cd38-rs1
Mus musculus	RefSeq	ILMN_220618	ILMN_220618	4732473B16RIK	NM_175307.5	NM_175307.5		100342	146198628	NM_175307.5	4732473B16Rik	NP_780516.1	ILMN_2724469	000730047	S	1881	GCCTGGGGATCCAACCTCGCTGATCACTAGGAAGAGATAAACTAAGGCAT				4qD2.3	Mus musculus RIKEN cDNA 4732473B16 gene (4732473B16Rik), mRNA.				RP23-137L22.1; AU046069; AU045678	RP23-137L22.1; AU046069; AU045678
Mus musculus	RefSeq	ILMN_221779	ILMN_221779	PIGN	NM_013784.1	NM_013784.1		27392	7305382	NM_013784.1	Pign	NP_038812.1	ILMN_2883666	000510167	S	3949	TTTTGGGAGACTCTGTGGCTTTGTTGATTATTGTTTCAGTGTCAGTCCCC	1	-	107417763-107417812	1qE2.1	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class N (Pign), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221779	ILMN_221779	PIGN	NM_013784.1	NM_013784.1		27392	7305382	NM_013784.1	Pign	NP_038812.1	ILMN_2740199	005130435	S	3462	CATGATGACACTGCAGTTTTAAGAGATGATGGATAATAATGCACAGTACA	1	-	107418250-107418299	1qE2.1	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class N (Pign), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201341	ILMN_201341	LOC382478	XM_356530.1	XM_356530.1			38091556	XM_356530.1	LOC382478		ILMN_1219493	004900601	S	118	TTGGAGCATCGAAAGCAGCAGAATGAGAGAGAGGGCAGAGAACGAACAGC										
Mus musculus	RefSeq	ILMN_222946	ILMN_222946	OLFR1294	NM_146885.1	NM_146885.1		258887	22129112	NM_146885.1	Olfr1294	NP_667096.1	ILMN_2757115	004200209	S	715	CTTGCACTGCCCACATTACAGTCGTGCTAATCTTTTTTGTGCCCTGCATC	2	-	111377680-111377729	2qE3	Mus musculus olfactory receptor 1294 (Olfr1294), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC157532; MOR248-7	MGC157532; MOR248-7
Mus musculus	Riken	ILMN_202862	ILMN_202862	6330403E01RIK	ri|6330403E01|PX00008A05|AK031808|2586					AK031808	6330403E01Rik		ILMN_1246339	004280484	S	2385	GCTGAGTGAGTGGGTGTAGAGTGGACTTGGGTGAGCTGGCTGTCACTGTG										
Mus musculus	RefSeq	ILMN_219667	ILMN_219667	AGT	NM_007428.3	NM_007428.3		11606	113461997	NM_007428.3	Agt	NP_031454.3	ILMN_1227398	001740246	S	1237	TGCCCACCCTTTTGGGTGCGGAGGCAAATCTGAACAACATTGGTGACACC	8	-	127081658-127081707	8qE2	Mus musculus angiotensinogen (serpin peptidase inhibitor, clade A, member 8) (Agt), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment [goid 9651] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IMP]; The process by which angiotensinogen metabolites in the bloodstream modulate the force with which blood passes through the circulatory system. The process begins when renin is released and cleaves angiotensinogen [goid 1991] [evidence IMP]; The decrease in blood vessel diameter as a result of the release of angiotensin into the blood stream [goid 1998] [evidence IDA]; The process by which an angiotensin-mediated signaling system present in the brain regulates the force with which blood passes through the circulatory system [goid 2035] [evidence IDA]; A decrease in the diameter of blood vessels, especially arteries, usually causing an increase in blood pressure [goid 42310] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]; The establishment of the barrier between the perineurium of peripheral nerves and the vascular endothelium of endoneurial capillaries. The perineurium acts as a diffusion barrier, but ion permeability at the blood-nerve barrier is still higher than at the blood-brain barrier [goid 8065] [evidence IMP]; Disruption of theca cell layer releasing follicular fluid and/or the oocyte [goid 1543] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IDA]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids [goid 45723] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IDA]; The specific actions or reactions of an organism relating to the intake of liquids, especially water [goid 42756] [evidence IMP]; A change in morphology and behavior of an astrocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 48143] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; The multiplication or reproduction of smooth muscle cells, resulting in the expansion of a cell population [goid 48659] [evidence IMP]; The multiplication or reproduction of smooth muscle cells, resulting in the expansion of a cell population [goid 48659] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The physiological response of the kidneys to a decrease in blood flow [goid 1999] [evidence IMP]; The process by which an increase in active angiotensin stimulates the adrenal cortices to secrete aldosterone [goid 2018] [evidence IMP]; The process by which angiotensin directly modulates the rate of urine output by the kidney [goid 2019] [evidence IMP]; The process by which angiotensinogen metabolites in the bloodstream modulate the force with which blood passes through the circulatory system. The process begins when renin is released and cleaves angiotensinogen [goid 1991] [evidence IMP]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with a type 1 angiotensin receptor [goid 31702] [evidence IDA]; Interacting selectively with a type 2 angiotensin receptor [goid 31703] [evidence IPI]	Aogen; AI265500; Serpina8	Aogen; AI265500; Serpina8
Mus musculus	RefSeq	ILMN_260281	ILMN_260281	ZC3H12B	NM_001034907.2	NM_001034907.2		547176	110347403	NM_001034907.2	Zc3h12b	NP_001030079.2	ILMN_3162365	002710368	S	1654	CATCGCGAAGGGTCCAAGGCAGGAGGGTGGTCTGCTATGATGATCGGTTC	X	+	93119835-93119884	XqC3	Mus musculus zinc finger CCCH-type containing 12B (Zc3h12b), mRNA.				Gm373; KIAA0615; A130028J20Rik; CXorf32	Gm373; KIAA0615; A130028J20Rik; CXorf32
Mus musculus	Riken	ILMN_203431	ILMN_203431	ABCD4	ri|C430017A13|PX00078F08|AK049489|2137					AK049489	Abcd4		ILMN_1245547	002030500	S	2040	CCCGGTACATAGGAGGCTGAAGCAGGAGGGTTGTAGGCCACTCTGAAAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215904	ILMN_215904	EPN3	NM_027984.2	NM_027984.2		71889	118130412	NM_027984.2	Epn3	NP_082260.1	ILMN_1239908	005550070	S	2119	CAGCAGCGTGCCGGTAGGCGCGACCCTCCCCGCCTCGGTCAGCGTCTTCC	11	-	94352577-94352626	11qD	Mus musculus epsin 3 (Epn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	2310022G12Rik	2310022G12Rik
Mus musculus	RefSeq	ILMN_213830	ILMN_251578	2310007D09RIK	NM_027975.1	NM_027975.1		71878	110625882	NM_027975.1	2310007D09Rik	NP_082251.1	ILMN_1217065	001740491	S	2784	GAGCCTCTACCAACCTGGTTTCTGTGAGGGACATAGCCCTTTACCCTCCC	2	+	158611829-158611878	2qH1	Mus musculus RIKEN cDNA 2310007D09 gene (2310007D09Rik), mRNA. XM_921817 XM_982681 XM_982712 XM_982744				BB104611; MGC92947	BB104611; MGC92947
Mus musculus	Riken	ILMN_206099	ILMN_206099	1110062G22RIK	ri|1110062G22|ZA00008A12|AK027988|631					AK027988	1110062G22Rik		ILMN_1249162	000240707	S	475	TGGGTCCTCCACAGACTTACTGTCTTTTGGCTCTGTAACATGGCTTGGGC										
Mus musculus	RefSeq	ILMN_210163	ILMN_221714	PRICKLE3	NM_175097.3	NM_175097.3		54630	141802108	NM_175097.3	Prickle3	NP_780306.1	ILMN_2602858	001740379	S	2254	CTGCTTGAACCATATCCCCACATAAGCTACAAAATGAGTGACCCACTACA	X	+	7245190-7245239	XqA1.1	Mus musculus prickle homolog 3 (Drosophila) (Prickle3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Sfc16	Sfc16
Mus musculus	RefSeq	ILMN_221714	ILMN_221714	PRICKLE3	NM_175097.3	NM_175097.3		54630	141802108	NM_175097.3	Prickle3	NP_780306.1	ILMN_2739398	003400450	S	1998	CCCCTTCTGCACTCCATCTTGTTTGTATTAGCGAAGCAATGTAATAGTTG	X	+	7244934-7244983	XqA1.1	Mus musculus prickle homolog 3 (Drosophila) (Prickle3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Sfc16	Sfc16
Mus musculus	RefSeq	ILMN_221915	ILMN_221915	RAD54L	NM_009015.2	NM_009015.2		19366	31982067	NM_009015.2	Rad54l	NP_033041.2	ILMN_2741985	007560373	S	2800	ACCTTCGTCTTCCACCAGCGTTCTCATGAGGAGCAGCGCGGTCTTCACTG	4	-	115769755-115769765:115769766-115769804	4qD1	Mus musculus RAD54 like (S. cerevisiae) (Rad54l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IGI]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	RAD54	RAD54
Mus musculus	Riken	ILMN_201657	ILMN_201657	COPS5	ri|1500002F13|R000020A04|AK005113|667					AK005113	Cops5		ILMN_1218536	002030427	S	420	GCCTTGTCAGTAGAGCCTTACCTGTCCTCTAGGGCCTGCTTCGATTCCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	Riken	ILMN_202070	ILMN_202070	ANGPTL2	ri|2610304B20|ZX00062I05|AK011976|2306					AK011976	Angptl2		ILMN_1248944	005820082	S	2035	AACCCAGTGTGGGGAGGTGGCAGGTGTGTGAAGGCTCTGGCAAATCGTCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222021	ILMN_222021	BRMS1	NM_134155.1	NM_134155.1		107392	19527391	NM_134155.1	Brms1	NP_598916.1	ILMN_2743551	000070519	S	1247	GAGAGGACGGCTTCCCAGGCTTTCTCAGGGCTATTCCTGGTGTCTGCCTC	19	+	5049826-5049875	19qA	Mus musculus breast cancer metastasis-suppressor 1 (Brms1), mRNA.		Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		AW554636; AV003220	AW554636; AV003220
Mus musculus	RefSeq	ILMN_194076	ILMN_218283	ONECUT2	NM_194268.2	NM_194268.2		225631	119220567	NM_194268.2	Onecut2	NP_919244.2	ILMN_2503156	006660008	S	3536	CCGAGTGAGTTGTCATATGAAGCAGCAGCCATTGAGGCTCGTCTGTTGAT	18	+	64548287-64548336	18qE1	Mus musculus one cut domain, family member 2 (Onecut2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IGI]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IGI]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2064] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 48935] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IGI]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	OC-2; MGC124203; Oc2; C730009D12	OC-2; MGC124203; Oc2; C730009D12
Mus musculus	RefSeq	ILMN_218283	ILMN_218283	ONECUT2	NM_194268.2	NM_194268.2		225631	119220567	NM_194268.2	Onecut2	NP_919244.2	ILMN_2693913	002140671	S	1357	GGAAAATAAGCGCCCTTCGAAGGAGATGCAGATCACCATTTCCCAGCAAC	18	+	64546108-64546157	18qE1	Mus musculus one cut domain, family member 2 (Onecut2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IGI]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IGI]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2064] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 48935] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IGI]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	OC-2; MGC124203; Oc2; C730009D12	OC-2; MGC124203; Oc2; C730009D12
Mus musculus	Riken	ILMN_205392	ILMN_205392	E030006K04RIK	ri|E030006K04|PX00204M07|AK053122|3603					AK053122	E030006K04Rik		ILMN_1218733	002370332	S	3363	AGCATGTGGCTGTCAGGAGGTGGCAATGAATAAGGAAGATCCTGCGAGGC										
Mus musculus	RefSeq	ILMN_200712	ILMN_248434	EG627022	XM_891654.3	XM_891654.3		627022	149255379	XM_891654.3	EG627022	XP_896747.2	ILMN_1250687	006290064	S	866	CTGGAGCCAACAATGGTCAGACCGTCCCCTACTATGCTGCTGTGGCTGCA	6	-	136434840-136434889	6qG1	PREDICTED: Mus musculus predicted gene, EG627022 (EG627022), mRNA.					
Mus musculus	RefSeq	ILMN_223649	ILMN_223649	MRPS26	NM_207207.1	NM_207207.1		99045	46402168	NM_207207.1	Mrps26	NP_997090.1	ILMN_3005827	002650291	S	519	ACTTCATCACTCGGGAGAACCTGGAGGCACGGATAGAAGAAGCGTTGGAC	2	+	130390687-130390736	2qF1	Mus musculus mitochondrial ribosomal protein S26 (Mrps26), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]			MRP-S13; AI648866; MRP-S26; Rpms13; GI008	MRP-S13; AI648866; MRP-S26; Rpms13; GI008
Mus musculus	RefSeq	ILMN_223649	ILMN_223649	MRPS26	NM_207207.1	NM_207207.1		99045	46402168	NM_207207.1	Mrps26	NP_997090.1	ILMN_3005828	003610280	S	813	TCAGGGCAGCATTAAACTCTGGGAAGTTCCTATCGCACAGAGGATCGGAC	2	+	130390981-130391030	2qF1	Mus musculus mitochondrial ribosomal protein S26 (Mrps26), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]			MRP-S13; AI648866; MRP-S26; Rpms13; GI008	MRP-S13; AI648866; MRP-S26; Rpms13; GI008
Mus musculus	RefSeq	ILMN_200534	ILMN_200534	LOC383303	XM_356974.1	XM_356974.1			38083415	XM_356974.1	LOC383303		ILMN_2539096	005810025	S	749	CTGGGGGTTGGAATGTATCCGAATCTTTCAGTGGTTGTAAAGCCCTCATG										
Mus musculus	Riken	ILMN_204121	ILMN_204121	B130044B09RIK	ri|B130044B09|PX00158G09|AK045183|1693					AK045183	B130044B09Rik		ILMN_1224971	006290669	S	1501	CTAAATTCCTGGATGATCTGCTATGACTTGGTTTGGCATGGAAACTCCCC										
Mus musculus	RefSeq	ILMN_217561	ILMN_217561	CCNK	NM_009832.1	NM_009832.1		12454	39930320	NM_009832.1	Ccnk	NP_033962.1	ILMN_3140813	001010725	A	882	CCTGGACCTTTACTCACAAGGGAAACAACAGATGCCTCATCACACCCCTC	12	+	109433809-109433858	12qF1	Mus musculus cyclin K (Ccnk), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		AW413594; CPR4; AW123198	AW413594; CPR4; AW123198
Mus musculus	RefSeq	ILMN_217561	ILMN_217561	CCNK	NM_009832.1	NM_009832.1		12454	39930320	NM_009832.1	Ccnk	NP_033962.1	ILMN_1256294	006370201	S	2328	GTACATAGAGAGATATTTTTTAAGCGTGAATGTAACAACATACTGTGAAT	12	+	109441454-109441503	12qF1	Mus musculus cyclin K (Ccnk), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		AW413594; CPR4; AW123198	AW413594; CPR4; AW123198
Mus musculus	RefSeq	ILMN_213570	ILMN_213570	SLAMF7	NM_144539.4	NM_144539.4		75345	146149073	NM_144539.4	Slamf7	NP_653122.2	ILMN_2638491	004200747	S	3907	CCAGCAGCTATGAGCCAGGTGCTGTGTTACACTTTCATGGATTGTTGCAA				1qH3	Mus musculus SLAM family member 7 (Slamf7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	19A24; 19A; 4930560D03Rik; CRACC; CS1	19A24; 19A; 4930560D03Rik; CRACC; CS1
Mus musculus	RefSeq	ILMN_218169	ILMN_260736	PCDH8	NM_001042726.1	NM_001042726.1		18530	112181186	NM_001042726.1	Pcdh8	NP_001036191.1	ILMN_1256415	002340619	S	3513	GGGATTTTATCTTTCACCAGAAACAACCTAATGTTTGAGAAGTTTTTGCC	14	-	80166716-80166765	14qD3	Mus musculus protocadherin 8 (Pcdh8), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Papc; 1700080P15Rik	Papc; 1700080P15Rik
Mus musculus	RefSeq	ILMN_205054	ILMN_260736	PCDH8	NM_001042726.1	NM_001042726.1		18530	112181186	NM_001042726.1	Pcdh8	NP_001036191.1	ILMN_1233633	001230475	S	2487	ACCACCTGCAACCGCCGCAAGAAGGAGCCTTACGGTGCCTCTCCAGGCTT	14	-	80168105-80168128:80168595-80168620	14qD3	Mus musculus protocadherin 8 (Pcdh8), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Papc; 1700080P15Rik	Papc; 1700080P15Rik
Mus musculus	RefSeq	ILMN_215811	ILMN_215811	SPEER3	NM_027650.2	NM_027650.2		71026	142350107	NM_027650.2	Speer3	NP_081926.1	ILMN_2663854	000730398	S	162	CTCCCAGAAAGATATCACCCACTGTACGTGACCTAAGTGAGAAGGAGTTC	5	+	13793216-13793265	5qA1	Mus musculus spermatogenesis associated glutamate (E)-rich protein 3 (Speer3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4933405P08Rik; SPEER-3	4933405P08Rik; SPEER-3
Mus musculus	RefSeq	ILMN_211155	ILMN_240694	RFC4	NM_145480.1	NM_145480.1		106344	21703947	NM_145480.1	Rfc4	NP_663455.1	ILMN_2741050	006350672	S	882	TGGAATATTCACTGCATGTCACAGTGGCTCTTTTGACAAACTAGAAGCTG	16	-	23114525-23114574	16qB1	Mus musculus replication factor C (activator 1) 4 (Rfc4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]	A1; RFC37; AI894123; AU040575	A1; RFC37; AI894123; AU040575
Mus musculus	RefSeq	ILMN_214480	ILMN_214480	CMTM7	NM_133978.1	NM_133978.1		102545	19527197	NM_133978.1	Cmtm7	NP_598739.1	ILMN_2648409	000460347	S	626	CTGGGCATCTACAGCCTCCTTTCACAGTCTGCTGCAGAGGACATCCCTCC	9	-	114666251-114666300	9qF3	Mus musculus CKLF-like MARVEL transmembrane domain containing 7 (Cmtm7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	AI481279; Cklfsf7	AI481279; Cklfsf7
Mus musculus	RefSeq	ILMN_214480	ILMN_214480	CMTM7	NM_133978.1	NM_133978.1		102545	19527197	NM_133978.1	Cmtm7	NP_598739.1	ILMN_1233809	001980768	S	357	CGGCACGCTGCTTCTCCTCATCGCCTCCATAGTGATAGCCTCCAAGAGTT	9	-	114671053-114671102	9qF3	Mus musculus CKLF-like MARVEL transmembrane domain containing 7 (Cmtm7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	AI481279; Cklfsf7	AI481279; Cklfsf7
Mus musculus	RefSeq	ILMN_214480	ILMN_214480	CMTM7	NM_133978.1	NM_133978.1		102545	19527197	NM_133978.1	Cmtm7	NP_598739.1	ILMN_2985447	006380326	S	518	ATGCATCTGCCTGATGAGGCCACAGCCTCTGGAGGACCCTCGCCATGGCT	9	-	114666359-114666395:114666396-114666408	9qF3	Mus musculus CKLF-like MARVEL transmembrane domain containing 7 (Cmtm7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	AI481279; Cklfsf7	AI481279; Cklfsf7
Mus musculus	Riken	ILMN_207298	ILMN_207298	SLC20A2	ri|4732477E15|PX00637L20|AK076380|2522					AK076380	Slc20a2		ILMN_1229092	006510010	S	2112	CCCGTGACCATAGCAACGTGGGAGGAAGGGTTTATCACACTTCGACTTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of phosphate into, out of, within or between cells [goid 6817] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 5315] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193745	ILMN_193745	9430078K10RIK	scl0077302.1_170						9430078K10Rik		ILMN_2500041	006520647	S	20	AACCAATAAGTATTTTTCCCCTGTGTATGAGTGACAATTTAAGAAGGGGG										
Mus musculus	RefSeq	ILMN_184408	ILMN_184408	ZFP316	NM_017467.2	NM_017467.2		54201	49227201	NM_017467.2	Zfp316	NP_059495.2	ILMN_1218057	001110398	S	4263	TGAGCTCACAGCGCCTTACTATGCAAGGCCCCTTACAGTGGACAGCTAAC	5	-	144013871-144013920	5qG2	Mus musculus zinc finger protein 316 (Zfp316), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MZF-3; Emzf1	MZF-3; Emzf1
Mus musculus	RefSeq	ILMN_184408	ILMN_184408	ZFP316	NM_017467.2	NM_017467.2		54201	49227201	NM_017467.2	Zfp316	NP_059495.2	ILMN_2435891	002940224	S	4157	CCTCTGCAAGCCTCTTCACACAGCCTCTGTAATCACCCTACACTAGGAGC	5	-	144013977-144014026	5qG2	Mus musculus zinc finger protein 316 (Zfp316), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MZF-3; Emzf1	MZF-3; Emzf1
Mus musculus	Riken	ILMN_206050	ILMN_206050	CHK	ri|D230040H07|PX00189J04|AK052056|3574					AK052056	Chk		ILMN_1223847	006020703	S	3424	GCAGGAGGTTGGAAAGGTGGCTCAGACACTCCATAGATCACTGGCTCCTC										
Mus musculus	Riken	ILMN_201753	ILMN_201753	2410024N13RIK	ri|2410024N13|ZX00047F05|AK010586|1095					AK010586	2410024N13Rik		ILMN_1225623	007200064	S	1014	GCATTCCAGCAGGATCTATGTCTTTGGATGTGATGCTTGCCCAGAGCAGC										
Mus musculus	RefSeq	ILMN_214838	ILMN_214838	HIST1H2BJ	NM_178198.1	NM_178198.1		319183	30061380	NM_178198.1	Hist1h2bj	NP_835505.1	ILMN_2652511	006040634	S	144	AGTGCACCCCGACACCGGTATCTCCTCCAAGGCCATGGGCATCATGAACT	13	+	22135242-22135291	13qA3.1	Mus musculus histone cluster 1, H2bj (Hist1h2bj), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197846	ILMN_197846	LOC332948	XM_285851.2	XM_285851.2			38078886	XM_285851.2	LOC332948		ILMN_1251202	006040706	S	1064	CAGGCCCTTCTCAGTGGCTGTGATTCGGGCAAGTGCTGCTTGCTGCCAAA										
Mus musculus	RefSeq	ILMN_214850	ILMN_214850	HSD3B2	NM_153193.2	NM_153193.2		15493	31542968	NM_153193.2	Hsd3b2	NP_694873.1	ILMN_1241116	004570142	S	2397	GGGTAGAGAGATCCTACCCTTTCAGAACATGCTTGTATCAACTGCCTCTA	3	-	98514426-98514475	3qF2.2	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 (Hsd3b2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid [goid 4769] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214850	ILMN_214850	HSD3B2	NM_153193.2	NM_153193.2		15493	31542968	NM_153193.2	Hsd3b2	NP_694873.1	ILMN_1259238	007610255	S	2393	TTTAGGGTAGAGAGATCCTACCCTTTCAGAACATGCTTGTATCAACTGCC	3	-	98514430-98514479	3qF2.2	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 (Hsd3b2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid [goid 4769] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214850	ILMN_214850	HSD3B2	NM_153193.2	NM_153193.2		15493	31542968	NM_153193.2	Hsd3b2	NP_694873.1	ILMN_1233611	004640195	S	2584	CTCCAAGAGTTCTTGCCTCTCAGAACTTGTGGTTTAAGAATAGCCTGAGC	3	-	98514239-98514288	3qF2.2	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 (Hsd3b2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid [goid 4769] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214850	ILMN_214850	HSD3B2	NM_153193.2	NM_153193.2		15493	31542968	NM_153193.2	Hsd3b2	NP_694873.1	ILMN_2898958	001710739	S	3310	CGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATTGGATGG	3	-	98513513-98513562	3qF2.2	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 (Hsd3b2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid [goid 4769] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214850	ILMN_214850	HSD3B2	NM_153193.2	NM_153193.2		15493	31542968	NM_153193.2	Hsd3b2	NP_694873.1	ILMN_1214838	002320768	S	1463	GGCCCTGGGTGTAATCAAGTCCTTCAGCAAGTAGAGACACACAAGACAGG	3	-	98515360-98515409	3qF2.2	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 (Hsd3b2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid [goid 4769] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214850	ILMN_214850	HSD3B2	NM_153193.2	NM_153193.2		15493	31542968	NM_153193.2	Hsd3b2	NP_694873.1	ILMN_1234480	007550575	S	3498	GGCCTAGCCGGCCATCACTGGAAAGAGATGCCCATTGGACATGCAAACTG	3	-	98513325-98513374	3qF2.2	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 (Hsd3b2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid [goid 4769] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195604	ILMN_195604	9630015D15RIK	scl25652.4_232				31340986	NM_181401	9630015D15Rik		ILMN_2517060	002630086	S	17	CTGCTGGGTGTGTGCCACATTGGTGCAAATAGATCCTTCCTGTGTGGCAG										
Mus musculus	RefSeq	ILMN_212762	ILMN_212762	MAST1	NM_019945.2	NM_019945.2		56527	125628633	NM_019945.2	Mast1	NP_064329.2	ILMN_1250114	007160768	S	4512	AGCGCTGGGTGCTAGAGGAGGTGGAAGAGCGGACCACGCTAAGCGGACTT	8	-	87436112-87436161	8qC3	Mus musculus microtubule associated serine/threonine kinase 1 (Mast1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	SAST170; SAST; 9430008B02Rik	SAST170; SAST; 9430008B02Rik
Mus musculus	RefSeq	ILMN_212762	ILMN_212762	MAST1	NM_019945.2	NM_019945.2		56527	125628633	NM_019945.2	Mast1	NP_064329.2	ILMN_3064311	000160427	I	745	GATCATTGAACTGGCCCGAGACTGCCTTACCAAGTCCCGCGATGGGCTCA	8	-	87452534-87452583	8qC3	Mus musculus microtubule associated serine/threonine kinase 1 (Mast1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	SAST170; SAST; 9430008B02Rik	SAST170; SAST; 9430008B02Rik
Mus musculus	RefSeq	ILMN_212762	ILMN_212762	MAST1	NM_019945.2	NM_019945.2		56527	125628633	NM_019945.2	Mast1	NP_064329.2	ILMN_3142097	000990020	A	4732	GACTCCTGCAGGCCTCACCAAAACTGGGGCACCTAGCCCTGCATCTCTAG	8	-	87435892-87435941	8qC3	Mus musculus microtubule associated serine/threonine kinase 1 (Mast1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	SAST170; SAST; 9430008B02Rik	SAST170; SAST; 9430008B02Rik
Mus musculus	Riken	ILMN_206279	ILMN_206279	E230027M02RIK	ri|E230027M02|PX00210P01|AK087627|3019					AK087627	E230027M02Rik		ILMN_1248145	000430452	S	2868	CATTCCCCTGGGTTTAGCACTATGTAAAAGTAGTAGAGGAAGGTACAGAG										
Mus musculus	MEEBO	ILMN_191671	ILMN_191671	4930503L19RIK	scl51300.11_44				27370481	NM_172967	4930503L19Rik		ILMN_2481149	000840504	S	18	GTGTACTGAGTATTTTCAAGCACCTACAGGAGTACCACCTATAACTACTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_217631	ILMN_217631	IFNG	NM_008337.3	NM_008337.3		15978	145966741	NM_008337.3	Ifng	NP_032363.1	ILMN_2685712	002850092	S	532	TTGCCGGAATCCAGCCTCAGGAAGCGGAAAAGGAGTCGCTGCTGATTCGG				10qD2	Mus musculus interferon gamma (Ifng), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process of apoptosis in inflammatory cells, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage [goid 6925] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45348] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; The process of apoptosis in neutrophils [goid 1781] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons [goid 31642] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]	Interacting selectively with the interferon-gamma receptor [goid 5133] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	IFN-gamma; Ifg; IFN-g	IFN-gamma; Ifg; IFN-g
Mus musculus	RefSeq	ILMN_213120	ILMN_318230	EG624138	XR_033064.1	XR_033064.1		624138	149233731	XR_033064.1	EG624138		ILMN_2646993	004280379	S	1161	CGAGATCCACCAGATCGACTTGATTGTACAGCTGTTGGGGACACCGAGTG				1qA5	PREDICTED: Mus musculus predicted gene, EG624138 (EG624138), misc RNA.					
Mus musculus	RefSeq	ILMN_256399	ILMN_256399	1700120B06RIK	NM_001033980.1	NM_001033980.1		436062	85702174	NM_001033980.1	1700120B06Rik	NP_001029152.1	ILMN_3163424	001260497	A	995	CAGCAAGGACCCCGAGACTAGGAAGAGGATTTCAGTGGCAGGAGGAAGGC	8	-	122690442-122690471:122690472-122690491	8qE1	Mus musculus RIKEN cDNA 1700120B06 gene (1700120B06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220520	ILMN_220520	RPS21	NM_025587.2	NM_025587.2		66481	114051544	NM_025587.2	Rps21	NP_079863.1	ILMN_1240898	002970612	S	207	CCACAGGCCGGTTTAATGGCCAGTTTAAAACCTATGGCATCTGCGGGGCC	2	+	179992701-179992750	2qH4	Mus musculus ribosomal protein S21 (Rps21), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	2410030A14Rik; MGC107620; 1810049N11Rik	2410030A14Rik; MGC107620; 1810049N11Rik
Mus musculus	RefSeq	ILMN_188533	ILMN_231810	DNAHC9	XM_917040.2	XM_917040.2		237806	94390469	XM_917040.2	Dnahc9	XP_922133.1	ILMN_2736123	004230039	S	10706	GTGAATTCAATCCCAAGTTCCGGCTCATCCTTCATACCAAGCTGGCCAAC				11qB3	PREDICTED: Mus musculus dynein, axonemal, heavy chain 9, transcript variant 5 (Dnahc9), mRNA.	The bundle of microtubules and associated proteins that forms the core of cilia in eukaryotic cells and is responsible for their movements [goid 35085] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_188533	ILMN_231810	DNAHC9	XM_917040.2	XM_917040.2		237806	94390469	XM_917040.2	Dnahc9	XP_922133.1	ILMN_2630138	006840088	S	13434	GACTTGTCAGCGGGGACCCACCTACGTGTGGACTTTCAATCTGAAGACTA				11qB3	PREDICTED: Mus musculus dynein, axonemal, heavy chain 9, transcript variant 5 (Dnahc9), mRNA.	The bundle of microtubules and associated proteins that forms the core of cilia in eukaryotic cells and is responsible for their movements [goid 35085] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_222786	ILMN_222786	C230013L11RIK	scl50125.1.1_5	NM_176985.2			31342525	NM_176985.2	C230013L11Rik		ILMN_1218175	005720681	S	2046	AACGTTGCTTTTAAACGTAGACAGAGACATGAATTTCCAGATATTAAAAT										
Mus musculus	RefSeq	ILMN_221069	ILMN_221069	SLC7A9	NM_021291.1	NM_021291.1		30962	11225267	NM_021291.1	Slc7a9	NP_067266.1	ILMN_2815752	005690224	S	1605	GCTCCAATCATCAGTGAGCCGGCCTGGGAGTATCTCTACTGTGTGTTGTT	7	+	35172410-35172459	7qB2	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 9 (Slc7a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	CSNU3	CSNU3
Mus musculus	RefSeq	ILMN_221069	ILMN_221069	SLC7A9	NM_021291.1	NM_021291.1		30962	11225267	NM_021291.1	Slc7a9	NP_067266.1	ILMN_2759963	006250164	S	497	AACACAGAATCCGTGGGGCCCTGTCTCATCATATGGGCCGCCTGTGGAAT	7	+	35161212-35161261	7qB2	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 9 (Slc7a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	CSNU3	CSNU3
Mus musculus	RefSeq	ILMN_221069	ILMN_221069	SLC7A9	NM_021291.1	NM_021291.1		30962	11225267	NM_021291.1	Slc7a9	NP_067266.1	ILMN_2730651	005870593	S	1761	TCGTCCCACCAGAAAAGGACCCAGAGTAAAAGGTCCATCACTCGTAGCCC	7	+	35174626-35174655:35174656-35174675	7qB2	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 9 (Slc7a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	CSNU3	CSNU3
Mus musculus	MEEBO	ILMN_211544	ILMN_211544	SLC39A1	scl0030791.1_194				39930336	NM_013901	Slc39a1		ILMN_2616877	001030307	S	2110	AAAACCAATAACCTGCCAAAACTTTATATCTGAGGAGTCCGGGGTGGAGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]		
Mus musculus	Riken	ILMN_206167	ILMN_206167	TULIP1-PENDING	ri|D030074D12|PX00182M18|AK083746|3917					AK083746	Tulip1-pending		ILMN_2578074	005860309	S	3839	TGGAAGGAAGACTTGACCCCTCCTCAGATGTGGATCATTCTCTAAGCTGC										
Mus musculus	RefSeq	ILMN_209987	ILMN_209987	ERCC3	NM_133658.1	NM_133658.1		13872	19526799	NM_133658.1	Ercc3	NP_598419.1	ILMN_1218154	007000286	S	2142	GCTAGCTGGCATGGAGGAAGAGGAGCTGGCGTTCTCCACCAAAGAGGAGC	18	+	32426829-32426878	18qB1	Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 3 (Ercc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]	Ercc-3; XPB	Ercc-3; XPB
Mus musculus	RefSeq	ILMN_209987	ILMN_209987	ERCC3	NM_133658.1	NM_133658.1		13872	19526799	NM_133658.1	Ercc3	NP_598419.1	ILMN_2957113	003840563	S	2533	GCTGAAAACCAGTCAGTGTGAGGCCTTAACTGCCTTCGTGGGTCCTAGGT	18	+	32429661-32429710	18qB1	Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 3 (Ercc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]	Ercc-3; XPB	Ercc-3; XPB
Mus musculus	RefSeq	ILMN_210162	ILMN_210162	NUP205	XM_133073.7	XM_133073.7		70699	94377254	XM_133073.7	Nup205	XP_133073.3	ILMN_2602855	004250379	S	6159	ATCCCGCTATAGTTTCATCCAGGCTCTCATCAGACGTATCCGTGGCCTGC	6	+	35197344-35197393	6qB1	PREDICTED: Mus musculus nucleoporin 205, transcript variant 1 (Nup205), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_218773	ILMN_218773	MTNR1A	NM_008639.2	NM_008639.2		17773	133893187	NM_008639.2	Mtnr1a	NP_032665.1	ILMN_1256388	003800711	S	1408	CAAGAGGGACCATGGGGACCTTCCTTTTATTGTAAGCGAGTGATACAGAG	8	+	46173765-46173814	8qB1.1	Mus musculus melatonin receptor 1A (Mtnr1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with melatonin, N-acetyl-5-methoxytryptamine, to initiate a change in cell activity. Melatonin is a neuroendocrine substance that stimulates the aggregation of melanosomes in melanophores, thus lightening the skin [goid 8502] [evidence TAS]	MR; MGC151277; MelR	MR; MGC151277; MelR
Mus musculus	RefSeq	ILMN_258178	ILMN_258178	ADCY7	NM_001037723.2	NM_001037723.2		11513	141802403	NM_001037723.2	Adcy7	NP_001032812.1	ILMN_3163572	007330189	A	4535	AGGATCAGATTGGCTGCAGGGACAGAGTTCTAAGGAATGGGGCTCATAGC	8	+	90852373-90852422	8qC3	Mus musculus adenylate cyclase 7 (Adcy7), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS]	AA407758; MGC141539	AA407758; MGC141539
Mus musculus	RefSeq	ILMN_221989	ILMN_221989	CCDC69	NM_177471.4	NM_177471.4		52570	115270980	NM_177471.4	Ccdc69	NP_803422.2	ILMN_2743093	002600692	S	431	CCATGTTATTGAGATGAAGAATGAACGAATTCACGAACTTGAGAAGCAGC	11	-	54865869-54865918	11qB1.3	Mus musculus coiled-coil domain containing 69 (Ccdc69), mRNA.				D11Ertd461e; 2210021E03Rik	D11Ertd461e; 2210021E03Rik
Mus musculus	MEEBO	ILMN_222446	ILMN_222446	OLFR242	scl0406175.1_49				33468914	NM_010974	Olfr242		ILMN_1216071	001030291	S	574	CGTTTATCATTGAAATATTGATTCTAGTTATTGCTACACTGAATGTCTTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_215278	ILMN_311490	LOC100046861	XM_001476495.1	XM_001476495.1		100046861	149257932	XM_001476495.1	LOC100046861	XP_001476545.1	ILMN_1222276	003390047	S	2367	GGTCACCTTCTGCTACATATGCAGCTAGAGACCCTAAGAAAACACACTGG					PREDICTED: Mus musculus similar to DUB-1 (LOC100046861), mRNA.					
Mus musculus	Riken	ILMN_206145	ILMN_206145	B930097L24RIK	ri|B930097L24|PX00166H16|AK081179|1530					AK081179	B930097L24Rik		ILMN_2577900	002070576	S	1424	CTCAAGGTGCCCACCCCAAGCCTCCCCTGCAGAACGAAGATGGGAAAGTT										
Mus musculus	Riken	ILMN_203061	ILMN_203061	B230215E15RIK	ri|B230215E15|PX00069N23|AK045610|2721					AK045610	B230215E15Rik		ILMN_1258995	005560161	S	2597	CAGTTCTCTGTACCACATCTCACACACTCACTCCTAGGTCCAAAAGGGTG										
Mus musculus	MEEBO	ILMN_215034	ILMN_215034	4930430K04RIK	scl074638.1_185	XM_135242.2			38090147	XM_135242.2	4930430K04Rik		ILMN_1250290	006980402	S	1581	GCCTCAACAGACAGGGCCGAGTGCTGTGTGATTGTCTAAGCACGTTACAC										
Mus musculus	RefSeq	ILMN_214451	ILMN_247377	KRTAP9-1	NM_015741.1	NM_015741.1		16705	7657286	NM_015741.1	Krtap9-1	NP_056556.1	ILMN_2648153	004560156	S	487	CCAACATGTGTTTGTGTGCCTGGTTGCCTGTCCCAAGGCTGTGGGTCCAG	11	+	99735240-99735289	11qD	Mus musculus keratin associated protein 9-1 (Krtap9-1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			MGC143591	MGC143591
Mus musculus	RefSeq	ILMN_207003	ILMN_250350	LOC676133	XR_004881.1	XR_004881.1		676133	94404761	XR_004881.1	LOC676133		ILMN_1231598	000430382	S	199	ACCCGAAGTCCTCTGAGTGGGCAGTCAAACTCCCTGAGAGTGAAGGTGTG					PREDICTED: Mus musculus similar to cytoplasmic beta-actin (LOC676133), mRNA.					
Mus musculus	RefSeq	ILMN_186000	ILMN_231119	ALLC	NM_053156.1	NM_053156.1		94041	16716444	NM_053156.1	Allc	NP_444386.1	ILMN_2667335	004490288	S	635	CCCTGACTCCAGCCACAACTATTATTTTGTTAATTCCCAGCAGAGATGGA	12	-	29248254-29248303	12qA2	Mus musculus allantoicase (Allc), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving allantoin, (2,5-dioxo-4-imidazolidinyl)urea, an intermediate or end product of purine catabolism [goid 255] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: allantoate + H2O = (-)-ureidoglycolate + urea [goid 4037] [evidence ISA]	MGC124130; MGC124129; 1700012B22Rik; Alc	MGC124130; MGC124129; 1700012B22Rik; Alc
Mus musculus	RefSeq	ILMN_231119	ILMN_231119	ALLC	NM_053156.1	NM_053156.1		94041	16716444	NM_053156.1	Allc	NP_444386.1	ILMN_2992073	006110280	S	952	ATGGCCTTCTCCTGGTCCCGGGTTGTGAGTGGGCAGTGTTCCGATTGGCA	12	-	29242247-29242296	12qA2	Mus musculus allantoicase (Allc), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving allantoin, (2,5-dioxo-4-imidazolidinyl)urea, an intermediate or end product of purine catabolism [goid 255] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: allantoate + H2O = (-)-ureidoglycolate + urea [goid 4037] [evidence ISA]	MGC124130; MGC124129; 1700012B22Rik; Alc	MGC124130; MGC124129; 1700012B22Rik; Alc
Mus musculus	MEEBO	ILMN_223045	ILMN_223045	4930479M11RIK	scl31513.2.1_158	NM_183108.1			34147098	NM_183108.1	4930479M11Rik		ILMN_2758596	006900349	S	507	ACCTGACTACACTCCACCAGTTCATTCTCATTTGTCTTCCACGGCTGTCT										
Mus musculus	RefSeq	ILMN_214791	ILMN_214791	POU4F3	NM_138945.1	NM_138945.1		18998	21070953	NM_138945.1	Pou4f3	NP_620395.1	ILMN_2651973	003710176	S	921	CGCGGAGAAACTGGACCTTAAAAAGAATGTGGTGAGGGTCTGGTTCTGTA	18	+	42555568-42555617	18qB3	Mus musculus POU domain, class 4, transcription factor 3 (Pou4f3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; Long distance growth of a single axon process involved in cellular development [goid 48676] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The process whose specific outcome is the progression of the vestibulocochlear nerve over time, from its formation to the mature structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea [goid 21562] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Brn3.1; dreidel; Brn3c; Brn-3.1; ddl	Brn3.1; dreidel; Brn3c; Brn-3.1; ddl
Mus musculus	MEEBO	ILMN_194574	ILMN_194574	5830415B17RIK	scl29421.1.1_282						5830415B17Rik		ILMN_2507658	007610047	S	15	GATCTCTTGCTAGAAAATGAAAGAAGTGGGTGCGGGGAGGGGGCTCAGGA										
Mus musculus	Riken	ILMN_205583	ILMN_205583	CDH8	ri|B930095L23|PX00166B03|AK047589|1410					AK047589	Cdh8		ILMN_1254818	006620632	S	942	GTCTGGCCTTGTTTCTTCCTTGTGTGTATGCATTCATTTGGTACCCATTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_226180	ILMN_226180	FAM169B	NM_001013811.2	NM_001013811.2		434197	126506292	NM_001013811.2	Fam169b	NP_001013833.1	ILMN_3014674	003400097	I	2618	CTGTGAAGGAAGCCCGGACCACAGACATGGACTGAACATCTGAGGGGTGC	7	+	75507830-75507879	7qD1	Mus musculus family with sequence similarity 169, member B (Fam169b), mRNA.					
Mus musculus	RefSeq	ILMN_212941	ILMN_212941	CIDEB	NM_009894.2	NM_009894.2		12684	142359816	NM_009894.2	Cideb	NP_034024.1	ILMN_3160626	000010575	S	819	GTGACACAGGAGGGTAGTAAAGGCACCATCAGGCTTGGGGTCTGCAGTGT	14	-	56373181-56373230	14qC3	Mus musculus cell death-inducing DNA fragmentation factor, alpha subunit-like effector B (Cideb), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110030C18Rik; CIDE-B; AI790179	1110030C18Rik; CIDE-B; AI790179
Mus musculus	RefSeq	ILMN_193922	ILMN_254717	CDR2L	NM_001080929.1	NM_001080929.1		237988	124286867	NM_001080929.1	Cdr2l	NP_001074398.1	ILMN_1238471	000540484	S	1747	TCCAGAAGACCAAGGCCGACATCAACGCCACCAAAGTCAAGACACACAGC	11	+	115255493-115255542	11qE2	Mus musculus cerebellar degeneration-related protein 2-like (Cdr2l), mRNA.				D030068L24Rik; Gm21	D030068L24Rik; Gm21
Mus musculus	RefSeq	ILMN_193922	ILMN_254717	CDR2L	NM_001080929.1	NM_001080929.1		237988	124286867	NM_001080929.1	Cdr2l	NP_001074398.1	ILMN_2501692	004830050	S	3343	TGCTGGGAGCCCAGGAGGAACCGTCATGCCTTACCTCCTTCTAATGGGTA	11	+	115257089-115257138	11qE2	Mus musculus cerebellar degeneration-related protein 2-like (Cdr2l), mRNA.				D030068L24Rik; Gm21	D030068L24Rik; Gm21
Mus musculus	Riken	ILMN_206826	ILMN_206826	E030040J22RIK	ri|E030040J22|PX00206H20|AK087262|639					AK087262	E030040J22Rik		ILMN_2582964	003360168	S	430	ACCCATGAACTGCCTTCGTGTTCCTTTGGGCGCTGGGGACTGGAACTCTG										
Mus musculus	MEEBO	ILMN_212859	ILMN_212859	MFNG	scl0002512.1_7	NM_008595.1			6678871	NM_008595.1	Mfng		ILMN_2631081	005340468	S	1000	CGGTGTCTTTGAGGGGAAACTGAATGTCATCAAGCTACCGGGCCCCTTCT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: transfers a beta-D-GlcNAc residue from UDP-D-GlcNAc to the fucose residue of a fucosylated protein acceptor [goid 33829] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221107	ILMN_221107	IL5	NM_010558.1	NM_010558.1		16191	6754335	NM_010558.1	Il5	NP_034688.1	ILMN_2731160	000160019	S	1372	GGTATCAGGGTCACTGGAGAAGCCTCCCCCAGTTTACTCCAGGAAAAACA	11	+	53537882-53537931	11qB1.3	Mus musculus interleukin 5 (Il5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the interleukin-5 receptor [goid 5137] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	Il-5	Il-5
Mus musculus	RefSeq	ILMN_220457	ILMN_220457	GRIN1	NM_008169.1	NM_008169.1		14810	6680094	NM_008169.1	Grin1	NP_032195.1	ILMN_1216667	004210041	S	2650	GCAGCCGTGAACGTGTGGAGGAAGAACCTGCAGGATAGAAAGAGTGGTAG	2	-	25150051-25150068:25151312-25151343	2qA3	Mus musculus glutamate receptor, ionotropic, NMDA1 (zeta 1) (Grin1), mRNA.	The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence NAS]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD [goid 17146] [evidence IPI]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IC ]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for the pons to attain its fully functional state. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum [goid 21586] [evidence IMP]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; The specific actions or reactions of a male organism that are associated with reproduction [goid 60179] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IGI]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment [goid 43576] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51963] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 10646] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions [goid 55074] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor, followed by the movement of ions through a channel in the receptor complex [goid 35235] [evidence IDA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus [goid 1661] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue [goid 8355] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IGI]	Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4972] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IDA];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IGI];  [goid 4972] [evidence ISO];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IDA];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IMP]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IGI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IGI]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	NMDAR1; GluRdelta1; Nmdar; NR1	NMDAR1; GluRdelta1; Nmdar; NR1
Mus musculus	RefSeq	ILMN_220457	ILMN_220457	GRIN1	NM_008169.1	NM_008169.1		14810	6680094	NM_008169.1	Grin1	NP_032195.1	ILMN_1253164	004570161	S	566	ACAACTGGAACCATATCATCCTGCTGGTCAGCGATGACCACGAGGGCCGG	2	-	25168995-25169044	2qA3	Mus musculus glutamate receptor, ionotropic, NMDA1 (zeta 1) (Grin1), mRNA.	The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence NAS]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD [goid 17146] [evidence IPI]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IC ]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for the pons to attain its fully functional state. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum [goid 21586] [evidence IMP]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; The specific actions or reactions of a male organism that are associated with reproduction [goid 60179] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IGI]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment [goid 43576] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51963] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 10646] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions [goid 55074] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor, followed by the movement of ions through a channel in the receptor complex [goid 35235] [evidence IDA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus [goid 1661] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue [goid 8355] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IGI]	Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4972] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IDA];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IGI];  [goid 4972] [evidence ISO];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IDA];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IMP]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IGI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IGI]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	NMDAR1; GluRdelta1; Nmdar; NR1	NMDAR1; GluRdelta1; Nmdar; NR1
Mus musculus	Riken	ILMN_203467	ILMN_203467	TULP3	ri|9530024H12|PX00111N13|AK035363|2215					AK035363	Tulp3		ILMN_1214767	000270239	S	1964	GGACCTCCCAGGACCCACATGGTAGAAGGAGAAAAACAACCCCCACCGAA										
Mus musculus	Riken	ILMN_205782	ILMN_205782	D230015O06RIK	ri|D230015O06|PX00188E21|AK051890|2649					AK051890	D230015O06Rik		ILMN_2575188	006840152	S	2475	TCTGATGGTAGAAGTCAGAGCCCGCTGGGTGGCTTCAGCCTCTGTTCTGG										
Mus musculus	RefSeq	ILMN_216683	ILMN_216683	SULT4A1	NM_013873.3	NM_013873.3		29859	34328448	NM_013873.3	Sult4a1	NP_038901.3	ILMN_1258935	007050154	S	2306	GTACTGTACGGATGTTCTGGAACCACACATGGTAATCTCTGCTTGCCTGC	15	-	83906554-83906603	15qE2	Mus musculus sulfotransferase family 4A, member 1 (Sult4a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione [goid 6790] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IDA]	2400007A17Rik; Sultx3; AI853543; BR-STL-1	2400007A17Rik; Sultx3; AI853543; BR-STL-1
Mus musculus	RefSeq	ILMN_201213	ILMN_201213	LOC382081	XM_358704.1	XM_358704.1			38089875	XM_358704.1	LOC382081		ILMN_1229641	007550687	S	93	GAGGCCATCAGAGCTGCAAAGGAAAGTGAAGTCAGGGAGTGGGCAGGCTC										
Mus musculus	Riken	ILMN_206252	ILMN_206252	C130087I15RIK	ri|C130087I15|PX00172N09|AK081921|1440					AK081921	C130087I15Rik		ILMN_1254797	003180427	S	1072	TAGCGTGCACCGTGGAAATCTATCCCCTCATCAGAAGGTACCTGAGGACC										
Mus musculus	Riken	ILMN_203055	ILMN_203055	CNNM2	ri|A930010O12|PX00065H06|AK044400|1941					AK044400	Cnnm2		ILMN_1223726	005310450	S	491	AGAACATCAACAACGAGACGTGGTCCCGCATCGCCTTCACTGAGCACGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_219378	ILMN_219378	RGAG4	NM_183318.1	NM_183318.1		331474	34304004	NM_183318.1	Rgag4	NP_899141.1	ILMN_2922368	000360608	S	4296	TGACCAGGGAGACCAAGCACATGAGCACTAAACTGGCCTGTGGGCCTCTG	X	-	98269570-98269619	XqD	Mus musculus retrotransposon gag domain containing 4 (Rgag4), mRNA.				KIAA2001; mKIAA2001; Mart5; 6430402L03Rik; Mar5	KIAA2001; mKIAA2001; Mart5; 6430402L03Rik; Mar5
Mus musculus	RefSeq	ILMN_192074	ILMN_240566	2410066E13RIK	NM_026629.3	NM_026629.3		68235	142377636	NM_026629.3	2410066E13Rik	NP_080905.1	ILMN_1244801	003060176	S	1552	GCAAGATATTCTCTGATGCCACTGTGAGACCCTTCCACGCGTGTCTCAGG	6	+	54650242-54650291	6qB3	Mus musculus RIKEN cDNA 2410066E13 gene (2410066E13Rik), mRNA.				B230212L03Rik; AI448550	B230212L03Rik; AI448550
Mus musculus	RefSeq	ILMN_211497	ILMN_253492	LOC666145	XM_981898.1	XM_981898.1		666145	94394747	XM_981898.1	LOC666145	XP_986992.1	ILMN_1216330	006350433	S	695	CTCGTGGCTACGGAGAACTGGTCTGGGTGGCCTGAAAATTTTGCCGAGGT	13	+	24838275-24838324	13qA3.1	PREDICTED: Mus musculus hypothetical LOC666145 (LOC666145), mRNA.					
Mus musculus	RefSeq	ILMN_212803	ILMN_212803	EDIL3	NM_010103.3	NM_010103.3		13612	145966871	NM_010103.3	Edil3	NP_034233.1	ILMN_2630495	001850367	S	4730	GTTTTCTCCAAATATATATTTAGAGTAGTATACTATAAGACTGATAAATC				13qC3	Mus musculus EGF-like repeats and discoidin I-like domains 3 (Edil3), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Del1	Del1
Mus musculus	Riken	ILMN_205529	ILMN_205529	VBP1	ri|D130048K19|PX00185C09|AK051431|2277					AK051431	Vbp1		ILMN_2573253	006270315	S	1698	CCTACCCAACTTCCATCTTGCTGCTTAGTCTTGAGTTTCTATGGGTGACA						A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218466	ILMN_218466	PROSC	NM_054057.4	NM_054057.4		114863	119829185	NM_054057.4	Prosc	NP_473398.1	ILMN_3037668	003400296	I	3411	TCCCACTTCAGAATTTCAACCAAGGAAAGTCCCTCGCAGGTGTGCCCAGC	8	+	28166412-28166461	8qA2	Mus musculus proline synthetase co-transcribed (Prosc), transcript variant 1, mRNA.				2200002F22Rik; 1700024N20Rik	2200002F22Rik; 1700024N20Rik
Mus musculus	MEEBO	ILMN_208850	ILMN_208850	9330119M13RIK	scl54640.1.841_19	NM_177044.2			31342671	NM_177044.2	9330119M13Rik		ILMN_1221459	004290382	S	1688	CAGTTATAGTAGATGAATAGAGGCATTTTCTTTGAGTTCCAGTTTCTTCC										
Mus musculus	Riken	ILMN_203015	ILMN_203015	PSMD3	ri|6030413L20|PX00056C24|AK031366|2895					AK031366	Psmd3		ILMN_1245271	003830215	S	2510	ACCTAGGCACTCAGGAAGCCCAGGCAAGAGCAGTGCACAGTTGAGGCAAC						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Modulates the activity of an enzyme [goid 30234] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219385	ILMN_219385	3930401K13RIK	NM_028720.2	NM_028720.2		74022	119392065	NM_028720.2	3930401K13Rik	NP_082996.2	ILMN_3141499	001980382	A	2843	CTCAGGACATGGGCACGGGGCAGGGGATGCTTGTGGAGTTCAGTGCAATT	16	-	5014436-5014485	16qA1	Mus musculus RIKEN cDNA 3930401K13 gene (3930401K13Rik), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid [goid 6573] [evidence IEA]; The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: 3-hydroxy-2-methylpropanoate + NAD+ = 2-methyl-3-oxopropanoate + NADH + H+ [goid 8442] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+ [goid 4616] [evidence IEA]	2810419J22Rik; Npac; AW545332	2810419J22Rik; Npac; AW545332
Mus musculus	Riken	ILMN_206238	ILMN_206238	C630030K01RIK	ri|C630030K01|PX00084J08|AK083240|2594					AK083240	C630030K01Rik		ILMN_1216656	006060139	S	2544	AGCTAAGTGGGACTGCATAATCAATCAGGAAGCTAACCACCCCCTCCCCC										
Mus musculus	RefSeq	ILMN_194583	ILMN_194583	WDR20B	NM_027614.1	NM_027614.1		70948	21735450	NM_027614.1	Wdr20b	NP_081890.1	ILMN_1235032	001820750	S	2155	TGGATTCTTCAGTGCCTCTTGTCTTCCTGCTCAGCCAGTACCAACTGTAG	12	+	66329368-66329417	12qC1	Mus musculus WD repeat domain 20b (Wdr20b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930427E19Rik; 4921538B03Rik; Wdr20	4930427E19Rik; 4921538B03Rik; Wdr20
Mus musculus	RefSeq	ILMN_216253	ILMN_216253	ALOX15	NM_009660.3	NM_009660.3		11687	134948632	NM_009660.3	Alox15	NP_033790.3	ILMN_2669006	004560592	S	1920	GCTGCCTTGGATAAGGAAATTGAGATTCGTAACAAGAGCTTGGACATACC	11	-	70160789-70160798:70161556-70161595	11qB3	Mus musculus arachidonate 15-lipoxygenase (Alox15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,14Z)-(12S)-12-hydroperoxyicosa-5,8,10,14-tetraenoate [goid 4052] [evidence IEA]	Alox12l; 12-LO; L-12LO	Alox12l; 12-LO; L-12LO
Mus musculus	Riken	ILMN_204105	ILMN_204105	YSG2	ri|A730091H12|PX00153A06|AK043392|1501					AK043392	Ysg2		ILMN_1246825	003440603	S	1159	CTGGGATTTGCAGCCCAACATTTGTCCAAACAGCATGTCCTGGCGCTGAG										
Mus musculus	Riken	ILMN_205183	ILMN_205183	C230092H20RIK	ri|C230092H20|PX00177M22|AK082708|4041					AK082708	C230092H20Rik		ILMN_1233960	000630598	S	3878	GCCTCTACCTCCCGCCATCCCCACTTAACCCAGACACACAAGGTGACGTT										
Mus musculus	RefSeq	ILMN_216665	ILMN_244185	GALNT14	NM_027864.1	NM_027864.1		71685	58000404	NM_027864.1	Galnt14	NP_082140.1	ILMN_1252600	006900463	S	2009	GCCAGGACGACATGGAGAGATGCACAATAGAGATGGTTTACAGAACAAAT	17	-	73843112-73843161	17qE2	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (Galnt14), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	0610033M06Rik	0610033M06Rik
Mus musculus	RefSeq	ILMN_219723	ILMN_219723	PHF10	NM_024250.3	NM_024250.3		72057	32129262	NM_024250.3	Phf10	NP_077212.2	ILMN_2712731	000110332	S	1546	GCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTTATTTACAACACT	17	-	15082040-15082089	17qA2	Mus musculus PHD finger protein 10 (Phf10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1810055P05Rik	1810055P05Rik
Mus musculus	RefSeq	ILMN_219723	ILMN_219723	PHF10	NM_024250.3	NM_024250.3		72057	32129262	NM_024250.3	Phf10	NP_077212.2	ILMN_1227540	001440735	S	1534	GGGGTAAAATAGGCTTTGACCCTCATGTTTGGGATATTTGGTGCCAATTT	17	-	15082052-15082101	17qA2	Mus musculus PHD finger protein 10 (Phf10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1810055P05Rik	1810055P05Rik
Mus musculus	Riken	ILMN_204809	ILMN_204809	NSG2	ri|C530023J09|PX00081H11|AK049679|1994					AK049679	Nsg2		ILMN_1249341	002690639	S	1746	GATTCCCCTGCCTCTTCTTTGGAGTGCTGGGATTAAAGGCGTATGTCACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IEA]	Interacting selectively with a dopamine receptor [goid 50780] [evidence IEA]		
Mus musculus	Riken	ILMN_202577	ILMN_202577	E430003H02RIK	ri|E430003H02|PX00096G21|AK088077|1546					AK088077	E430003H02Rik		ILMN_1248951	005360026	S	1298	GAATTCAGGACCAATACTTGCTCAGCCCACCTCGCTCCGACCCAAAGATT										
Mus musculus	Riken	ILMN_207413	ILMN_207413	TGFBR2	ri|G630098D03|PL00014O24|AK090393|3539					AK090393	Tgfbr2		ILMN_1215171	003840025	S	3191	GTGTCCACACCCCCACCCCACACACAAAGAGTGACTTGTGACCAGCAAGC						The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of B cell tolerance induction [goid 2663] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation [goid 51138] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction [goid 2666] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tolerance induction to self antigen [goid 2651] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; Any process that initiates the activity of an inactive protein kinase [goid 32147] [evidence IDA]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 4702] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215711	ILMN_215711	CTH	NM_145953.2	NM_145953.2		107869	31981852	NM_145953.2	Cth	NP_666065.1	ILMN_2662719	004920497	S	1747	AAATAAATCTAGTTATCAAGTTATTTTTCTTAAATAAATCTAGTTATCAA	3	-	157557216-157557265	3qH4	Mus musculus cystathionase (cystathionine gamma-lyase) (Cth), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cysteine, 2-amino-3-mercaptopropanoic acid [goid 19344] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: L-cystathionine + H2O = L-cysteine + NH3 + 2-oxobutanoate [goid 4123] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	0610010I13Rik; AI314617; BC019483; Cys3; MGC28655	0610010I13Rik; AI314617; BC019483; Cys3; MGC28655
Mus musculus	RefSeq	ILMN_215711	ILMN_215711	CTH	NM_145953.2	NM_145953.2		107869	31981852	NM_145953.2	Cth	NP_666065.1	ILMN_2733193	007040142	S	541	GCCTGCGCACAAATTGTCCACAAACGTGGAGACATCATTTTGGTTGTAGA	3	-	157576591-157576640	3qH4	Mus musculus cystathionase (cystathionine gamma-lyase) (Cth), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cysteine, 2-amino-3-mercaptopropanoic acid [goid 19344] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: L-cystathionine + H2O = L-cysteine + NH3 + 2-oxobutanoate [goid 4123] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	0610010I13Rik; AI314617; BC019483; Cys3; MGC28655	0610010I13Rik; AI314617; BC019483; Cys3; MGC28655
Mus musculus	Riken	ILMN_204747	ILMN_204747	G2AN	ri|B930066E17|PX00164D14|AK047454|2556					AK047454	G2an		ILMN_1251640	005220500	S	2390	ATGAGGTCTGGTTTGCATCTCTGGGCCTATTTCTTTCCCTTTCCAGGGCC										
Mus musculus	RefSeq	ILMN_217220	ILMN_217220	1500019G21RIK	NM_024172.2	NM_024172.2		66245	31980612	NM_024172.2	1500019G21Rik	NP_077134.1	ILMN_2680463	005130563	S	829	GCAGTTCCTCCGCCTGGATGGATTCTCAGTGCTGATGCGGGCCATGCAGC	7	-	4267865-4267914	7qA1	Mus musculus RIKEN cDNA 1500019G21 gene (1500019G21Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Hspbp1	Hspbp1
Mus musculus	MEEBO	ILMN_193456	ILMN_193456	HIST1H4B	scl44205.2.1_2				30061404	NM_178193	Hist1h4b		ILMN_1221724	000110243	S	18	GGTCAAGCCCCTTTGCCTAGTCATATAGATGCACTTGGCTATTCCCTGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218599	ILMN_218599	STOML3	NM_153156.1	NM_153156.1		229277	23346602	NM_153156.1	Stoml3	NP_694796.1	ILMN_2868808	004280390	S	477	GCGAGAAGAGATCGCACATAGCATCCAGACCTTGCTTGATGATGCCACCG	3	+	53307265-53307292:53309353-53309374	3qC	Mus musculus stomatin (Epb7.2)-like 3 (Stoml3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Epb7.2l; sro; SLP3	Epb7.2l; sro; SLP3
Mus musculus	RefSeq	ILMN_197646	ILMN_197646	LOC380959	XM_354869.1	XM_354869.1			38077107	XM_354869.1	LOC380959		ILMN_2528860	004900180	S	931	TGGTAGTTAATGGTGGCATTGTTGTTGGTGACCGGAGTAGTCACGAGGCC										
Mus musculus	MEEBO	ILMN_185100	ILMN_185100	1500017E21RIK	scl52527.8.1_8						1500017E21Rik		ILMN_2424150	003310463	S	3	AGGTCTGTCTTCGCATAGCCGTCGTACTGTGTGCTCCTCTGCAGTGCATG										
Mus musculus	MEEBO	ILMN_191964	ILMN_191964	1110004P21RIK	scl070595.1_69						1110004P21Rik		ILMN_2483786	004670685	S	2	GATCCACAGTCCTGCATTTCCCGCTGCCTTTTGTGTTAATGATCTTGGAC										
Mus musculus	RefSeq	ILMN_209710	ILMN_209710	ANGEL1	NM_144524.1	NM_144524.1		68737	21362312	NM_144524.1	Angel1	NP_653107.1	ILMN_2598438	001990068	S	3680	CCTGCCAGGAAATGCAGGTTCAACTGCTAAAGGAGGCAGAGGGTCAGAGC	12	-	88041585-88041634	12qD2	Mus musculus angel homolog 1 (Drosophila) (Angel1), mRNA.				1110030H02Rik; mKIAA0759; KIAA0759	1110030H02Rik; mKIAA0759; KIAA0759
Mus musculus	RefSeq	ILMN_226813	ILMN_226813	RGS1	NM_015811.1	NM_015811.1		50778	7657511	NM_015811.1	Rgs1	NP_056626.1	ILMN_2897891	006840594	S	712	GCCTACTTGGGTGGCTCAGGAGGCCCAGTGGAAGTACAGATGACTCAGAA	1	-	146092298-146092347	1qF	Mus musculus regulator of G-protein signaling 1 (Rgs1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	BL34	BL34
Mus musculus	RefSeq	ILMN_191801	ILMN_226813	RGS1	NM_015811.1	NM_015811.1		50778	7657511	NM_015811.1	Rgs1	NP_056626.1	ILMN_2596596	004830072	S	160	GAGATCGATGATCCCACATCTGGAATCTGGGATGAAATCGGCCAAGTCCA	1	-	146095615-146095664	1qF	Mus musculus regulator of G-protein signaling 1 (Rgs1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	BL34	BL34
Mus musculus	RefSeq	ILMN_191801	ILMN_226813	RGS1	NM_015811.1	NM_015811.1		50778	7657511	NM_015811.1	Rgs1	NP_056626.1	ILMN_2625377	000450368	S	996	GCGTGCTGTTGTGTAGAATGTGTTGAACTCTTGCAATCTCCTTCCCTTGG	1	-	146092014-146092063	1qF	Mus musculus regulator of G-protein signaling 1 (Rgs1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	BL34	BL34
Mus musculus	Riken	ILMN_204715	ILMN_204715	A530065E19RIK	ri|A530065E19|PX00142I01|AK041034|1558					AK041034	A530065E19Rik		ILMN_1232712	005720170	S	1242	CTTTAGCTGTGTGTTTCCTAGCTAGACTCTAGGGGGCAGCATTGCCCCGC										
Mus musculus	MEEBO	ILMN_213625	ILMN_213625	HMGN2	scl015331.1_246	NM_016957.2			31980676	NM_016957.2	Hmgn2		ILMN_2639081	001240471	S	1024	GTGGCTTTCTGATTTTGGTAGTCTATACAAGAAGGGAATTTGGAAGTTCT						The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	Riken	ILMN_205563	ILMN_205563	A930007F16RIK	ri|A930007F16|PX00065I19|AK044320|2931					AK044320	A930007F16Rik		ILMN_1226986	004290474	S	2593	GCAAGGGATAAAACACAGGGCCTTACACATGCTAGACAAACACACTACCC										
Mus musculus	Riken	ILMN_207441	ILMN_207441	9530008A22RIK	ri|9530008A22|PX00653O04|AK079177|1615					AK079177	9530008A22Rik		ILMN_2587622	003440347	S	1273	CAGGGATGGGCAGAGACAAGAGGTGTCTGTACCAGAGGTGGCGACTTGGT										
Mus musculus	Riken	ILMN_204881	ILMN_204881	A530020A01RIK	ri|A530020A01|PX00140C02|AK040719|2231					AK040719	A530020A01Rik		ILMN_1218000	006770092	S	2018	AGAGAAGGTTCCTGGTCCCCACACTGTCCCCAAGTCCGCAGAGAGCAGCA										
Mus musculus	RefSeq	ILMN_221462	ILMN_221462	SNTB1	NM_016667.3	NM_016667.3		20649	146134372	NM_016667.3	Sntb1	NP_057876.1	ILMN_2735938	004830577	S	1927	CTCCTTTCTGTCTGCTAAGATAACACGACTGGGCTTGGTGGCCTGAACAG				15qD1	Mus musculus syntrophin, basic 1 (Sntb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216809	ILMN_216809	TBKBP1	NM_198100.1	NM_198100.1		73174	37674211	NM_198100.1	Tbkbp1	NP_932768.1	ILMN_2965285	001470376	S	3110	TCCTCTGTGAAGGGGGTGAGGGGTATGTCAGCAGGGAAGGGGCCAAGGAC	11	-	96997618-96997667	11qD	Mus musculus TBK1 binding protein 1 (Tbkbp1), mRNA.		Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		ProSAPiP2; 3110043L15Rik	ProSAPiP2; 3110043L15Rik
Mus musculus	RefSeq	ILMN_223854	ILMN_231165	SLC9A1	NM_016981.2	NM_016981.2		20544	114842401	NM_016981.2	Slc9a1	NP_058677.1	ILMN_2770471	003940097	S	4474	TTGGGCAGGAGTTGCCAGGCAGGGTGACATCGACAACCATGTACAAAGCC	4	+	132979481-132979530	4qD2.3	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 1 (Slc9a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IDA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IDA]	Nhe1; swe; AW554487; Apnh	Nhe1; swe; AW554487; Apnh
Mus musculus	RefSeq	ILMN_207458	ILMN_207458	SPIN	NM_011462.1	NM_011462.1			6755619	NM_011462.1	Spin		ILMN_1260507	001570364	I	3496	GGGTAAAGACGAACAGGTGAAGCAGTCGTAGCGCCGACCGAAGTGATTCC										
Mus musculus	RefSeq	ILMN_207458	ILMN_207458	SPIN	NM_011462.1	NM_011462.1			6755619	NM_011462.1	Spin		ILMN_2742626	004280021	S	1956	CTGTTGTGCAGTGTCTGTTCCTGCCCCAGGTGTGCTATTCACGCAGGTTT										
Mus musculus	RefSeq	ILMN_209377	ILMN_209377	CREB3L1	NM_011957.2	NM_011957.2		26427	117606376	NM_011957.2	Creb3l1	NP_036087.2	ILMN_2595260	004220292	S	1514	AGAGACCTGGCCAGAGGACACTGATGACAACGGCACCAGCCCCAACTTCT	2	-	91823349-91823398	2qE1	Mus musculus cAMP responsive element binding protein 3-like 1 (Creb3l1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]	MGC25246; Oasis	MGC25246; Oasis
Mus musculus	RefSeq	ILMN_199443	ILMN_209377	CREB3L1	NM_011957.2	NM_011957.2		26427	117606376	NM_011957.2	Creb3l1	NP_036087.2	ILMN_2535223	006400482	S	280	ACATGGAACTGGACTCCCCCGCTCCAGGCATCCAGGCTGAGCACAGCTAC	2	-	91842068-91842117	2qE1	Mus musculus cAMP responsive element binding protein 3-like 1 (Creb3l1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]	MGC25246; Oasis	MGC25246; Oasis
Mus musculus	Riken	ILMN_201760	ILMN_201760	2700010E02RIK	ri|2700010E02|ZX00048P19|AK012229|1861					AK012229	2700010E02Rik		ILMN_2544376	002120703	S	631	CGCCCTGCTGGACTTTACTTTACAAGATTAATGCCGCTGCTAAAAGAGGG										
Mus musculus	RefSeq	ILMN_198120	ILMN_198120	LOC333459	XM_285586.2	XM_285586.2			38082004	XM_285586.2	LOC333459		ILMN_1228736	000520047	S	513	TGCACTGAGGCAGCGTCTGAAGAACAAGAGTCACCGAATTCAAGTGTATC										
Mus musculus	RefSeq	ILMN_218255	ILMN_218255	AP2M1	NM_009679.2	NM_009679.2		11773	133892644	NM_009679.2	Ap2m1	NP_033809.1	ILMN_1227300	007650438	S	1904	AGAGTGGAGTTGCTGGCTAAATGTTAATGGGGCCCGCAGAGGGTCTGACG	16	+	20543973-20544022	16qA3	Mus musculus adaptor protein complex AP-2, mu1 (Ap2m1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence TAS]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex [goid 30132] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC102136	MGC102136
Mus musculus	RefSeq	ILMN_211413	ILMN_211413	SHMT2	NM_028230.3	NM_028230.3		108037	118130451	NM_028230.3	Shmt2	NP_082506.1	ILMN_1224942	004040767	S	2222	CTGATCAGAGCCGACACCAGACGTGATTAGCAGGCGCAGCAAATTCAATT	10	-	126954203-126954252	10qD3	Mus musculus serine hydroxymethyltransferase 2 (mitochondrial) (Shmt2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [evidence IEA]	2700043D08Rik; AA408223; AA986903	2700043D08Rik; AA408223; AA986903
Mus musculus	RefSeq	ILMN_211413	ILMN_211413	SHMT2	NM_028230.3	NM_028230.3		108037	118130451	NM_028230.3	Shmt2	NP_082506.1	ILMN_2702703	005090241	S	272	GACCCTGAGATGTGGGAGCTTCTGCAGAGGGAGAAGGACAGACAGTGTCG	10	-	126957998-126958047	10qD3	Mus musculus serine hydroxymethyltransferase 2 (mitochondrial) (Shmt2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [evidence IEA]	2700043D08Rik; AA408223; AA986903	2700043D08Rik; AA408223; AA986903
Mus musculus	MEEBO	ILMN_214751	ILMN_214751	PCM1	scl000741.1_22				13785810	AF352180	Pcm1		ILMN_1242941	003460114	S	703	TCAGCTGTGGGATCTGGTTCTGTAGCTGAGAGCACATCGCTAAACGCAGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]				
Mus musculus	Riken	ILMN_203587	ILMN_203587	4932443H13RIK	ri|4932443H13|PX00019K06|AK030123|3084					AK030123	4932443H13Rik		ILMN_1222050	002630440	S	2786	GAGGGCAGCATCCTCTCCTGAGTTGGGACCCAGATGAAATAAAAGTGGGG										
Mus musculus	RefSeq	ILMN_247298	ILMN_247298	OTTMUSG00000015859	NM_001037752.2	NM_001037752.2		433490	141801976	NM_001037752.2	OTTMUSG00000015859	NP_001032841.1	ILMN_3162301	005890497	S	151	CCCCTGAAAGATGCTGGAAGTCTTTTGGTGTCTGCCGTGAAGAGTGTGCC	2	-	152419114-152419163	2qH1	Mus musculus predicted gene, OTTMUSG00000015859 (OTTMUSG00000015859), mRNA.				Defb27	Defb27
Mus musculus	Riken	ILMN_205342	ILMN_205342	A630046J22RIK	ri|A630046J22|PX00146M19|AK041914|3803					AK041914	A630046J22Rik		ILMN_1223339	006590148	S	3519	GCTAAAGCCTGAGTTTCCCTTCTGCTGGCTCATGGGGCTGTGCTGTGTTC										
Mus musculus	Riken	ILMN_202398	ILMN_202398	4930555L11RIK	ri|4930555L11|PX00035I24|AK016135|1484					AK016135	4930555L11Rik		ILMN_2549307	001340100	S	1292	GCCTGAGGTCACAGCACTAAAAATGCCCGAGTAAAGAAGAGGCCTCGCTG										
Mus musculus	Riken	ILMN_202521	ILMN_202521	2210022J03RIK	ri|2210022J03|ZX00081J01|AK008770|1327					AK008770	2210022J03Rik		ILMN_1260322	000150360	S	838	CAGTGTGGTGTAGAGGCTCTGGAGATAAGAGCCCTTACCCTGCCACCTCC										
Mus musculus	MEEBO	ILMN_218271	ILMN_218271	BC067047	scl18319.4.1_11				51712726	XM_485102	BC067047		ILMN_1251066	000540279	S	1429	CCTGGCTCCTGGAAATTGGTGAGATCAGCAAGACGGAAGAAGGCGTCAAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223352	ILMN_223352	CML4	NM_023455.2	NM_023455.2		68396	31980866	NM_023455.2	Cml4	NP_075944.1	ILMN_1216539	003170255	S	957	CCTTCGTGGACATACTCACATGGCTTGTGGATGTTTCTCTAATTCATTTC	6	-	85780498-85780547	6qC3	Mus musculus camello-like 4 (Cml4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]; An electron dense structure that is associated with meiotic chromosomes in pachytene during meiosis I [goid 5715] [evidence ISA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence ISA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence NAS]	0610037O16Rik	0610037O16Rik
Mus musculus	RefSeq	ILMN_198718	ILMN_198718	XRRA1	XM_194369.7	XM_194369.7		446101	149257605	XM_194369.7	Xrra1	XP_194369.5	ILMN_2532681	006770482	S	2589	CAGCCCTGAACAGAGGGGGCTTGGGCTCCATTTCGCTCCGTGGTCAGTAT	7	+	107066196-107066245	7qE2	PREDICTED: Mus musculus X-ray radiation resistance associated 1 (Xrra1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_205918	ILMN_205918	B130039D17RIK	ri|B130039D17|PX00157D09|AK045133|3980					AK045133	B130039D17Rik		ILMN_1214088	003990767	S	3526	CTGTTGCCTGTGCTCACTCGCATCTGTGGCATAGGACGAACCGTAGGCTG										
Mus musculus	MEEBO	ILMN_216830	ILMN_216830	9430097D07RIK	scl19442.1.1_32	NM_175679.2			31342312	NM_175679.2	9430097D07Rik		ILMN_2675842	002630075	S	1138	GCCTTGGGACAGTGGGAGGAATAACCCAGAGAACTAGAAACGAGCAGAAG										
Mus musculus	RefSeq	ILMN_218517	ILMN_218517	IL4	NM_021283.1	NM_021283.1		16189	10946583	NM_021283.1	Il4	NP_067258.1	ILMN_2931334	001300445	S	371	TCATGGAGCTGCAGAGACTCTTTCGGGCTTTTCGATGCCTGGATTCATCG	11	-	53431681-53431719:53431752-53431762	11qB1.3	Mus musculus interleukin 4 (Il4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of B cell activation [goid 50871] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgE isotypes [goid 48295] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IDA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence IDA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45348] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat5 protein [goid 42523] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA];  [goid 5126] [evidence IEA]; Interacting selectively with the interleukin-4 receptor [goid 5136] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	IgG1; Il-4	IgG1; Il-4
Mus musculus	RefSeq	ILMN_199444	ILMN_211317	TMEM45A	NM_019631.3	NM_019631.3		56277	142373885	NM_019631.3	Tmem45a	NP_062605.2	ILMN_2535227	004250487	S	592	CATAAAGATGGCCAGTGGAACCAGATCCTGGGCTGGCATCACACAACCAT	16	-	56823610-56823659	16qC1.1	Mus musculus transmembrane protein 45a (Tmem45a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]			p19.5; M32486; C630002M10Rik	p19.5; M32486; C630002M10Rik
Mus musculus	MEEBO	ILMN_184509	ILMN_184509	1700065A05RIK	scl24147.2.1_240				51709295	XM_283972	1700065A05Rik		ILMN_2419228	000240047	S	10	AAGCCTCTGAAAGACATTTTCAAAAATGCAATTGTAATTTGTTAGTGGAA										
Mus musculus	MEEBO	ILMN_184509	ILMN_184509	1700065A05RIK	scl24147.2.1_240				51709295	XM_283972	1700065A05Rik		ILMN_2696826	003520674	S	4685	AAGCGGCAGCATTCCATCAGCCAGTGAGCCCTCTGAACACAAACCCACGT										
Mus musculus	RefSeq	ILMN_235238	ILMN_235238	CCDC13	NM_001033784.1	NM_001033784.1		434446	85702098	NM_001033784.1	Ccdc13	NP_001028956.1	ILMN_3161514	000620047	S	608	CTCACCTGGGACCTGGCGGGGAAGGGCTCAACAAATTCTAGTGCTGCAGA	9	-	121728617-121728666	9qF4	Mus musculus coiled-coil domain containing 13 (Ccdc13), mRNA. XM_902983				Gm188; 2900041A11Rik	Gm188; 2900041A11Rik
Mus musculus	RefSeq	ILMN_196782	ILMN_196782	IFNA7	NM_008334.2	NM_008334.2		15970	45598383	NM_008334.2	Ifna7	NP_032360.2	ILMN_2658633	000070189	S	216	GGAGGCTCAAGCCCTCTGTGTTCTGCATGAGCTGACCCAGCAGATCCTGA	4	+	88462347-88462396	4qC4	Mus musculus interferon alpha 7 (Ifna7), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	 [goid 5126] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	Ifa7	Ifa7
Mus musculus	Riken	ILMN_203598	ILMN_203598	SATB1	ri|A430104A14|PX00064F04|AK040502|3842					AK040502	Satb1		ILMN_1240428	001240437	S	3418	CTAGTAACAGGAGGGCAACCGTGACAGTTCTCAAGACGATCTAGCACCGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell [goid 43367] [evidence IMP]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell [goid 43374] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; An automatic response to a stimulus beginning with a nerve impulse from a receptor and ending with the action of an effector such as a gland or a muscle. Signaling never reaches a level of consciousness [goid 60004] [evidence IMP]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215149	ILMN_215149	DPPA1	NM_178247.2	NM_178247.2		347708	31342425	NM_178247.2	Dppa1	NP_839978.1	ILMN_2656079	001240358	S	439	CTGTAGACACTGTCGACATTATCAAAGTTCCAGTTGCCATTTGAGGGGCC	11	-	46422360-46422365:46422366-46422409	11qB1.1	Mus musculus developmental pluripotency associated 1 (Dppa1), mRNA.				C77727	C77727
Mus musculus	RefSeq	ILMN_217668	ILMN_217668	RECQL5	NM_130454.1	NM_130454.1		170472	18485509	NM_130454.1	Recql5	NP_569721.1	ILMN_1243890	005820379	S	3269	ACCAATGGGCCTCCTGTCTTGTACCTAAGTTCTCTATCAGGGTGATGCCC	11	-	115754090-115754139	11qE2	Mus musculus RecQ protein-like 5 (Recql5), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	Recql5b; Recq5b	Recql5b; Recq5b
Mus musculus	RefSeq	ILMN_221081	ILMN_221081	TMUB1	NM_022418.1	NM_022418.1		64295	11967944	NM_022418.1	Tmub1	NP_071863.1	ILMN_2932660	007040592	S	1103	CAGGGCACCCCAATGGGCCCATCTTAGTGTGCTGACAGAGGATCTAGATA	5	-	23955654-23955703	5qA3	Mus musculus transmembrane and ubiquitin-like domain containing 1 (Tmub1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		AB030183; Hops; 2010004O20Rik	AB030183; Hops; 2010004O20Rik
Mus musculus	MEEBO	ILMN_184591	ILMN_184591	4930506F14RIK	scl36489.1.3_311						4930506F14Rik		ILMN_1251849	004120382	S	1	CGGCAAAGGGCTGCTGGCTTTTCGGCTACATAAATAAGACCCCTTCTACC										
Mus musculus	RefSeq	ILMN_198294	ILMN_198294	LOC330267	XM_287555.2	XM_287555.2			38083688	XM_287555.2	LOC330267		ILMN_2531172	005910243	S	1942	CGTTCCTTGTCCAATTGAATGTGAGGTTTCGCCTTGGTCAGCCTGGGGAC										
Mus musculus	RefSeq	ILMN_216287	ILMN_216287	LMNB2	NM_010722.5	NM_010722.5		16907	113195685	NM_010722.5	Lmnb2	NP_034852.2	ILMN_2669404	006100735	S	3125	GTCTAGAGTAATCTGCAGGTCCTCAGGGGTCTGTTTCTGGCCCTGGCTAG	10	-	80364304-80364353	10qC1	Mus musculus lamin B2 (Lmnb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222286	ILMN_222286	A230050P20RIK	NM_175687.1	NM_175687.1		319278	28316793	NM_175687.1	A230050P20Rik	NP_783618.1	ILMN_2839745	006940132	S	1561	GAAGCCCTGCTACTCCATCTCTTCACCGAAATAAAAGGCTCTGGCTTCTC	9	+	20678683-20678732	9qA3	Mus musculus RIKEN cDNA A230050P20 gene (A230050P20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222286	ILMN_222286	A230050P20RIK	NM_175687.1	NM_175687.1		319278	28316793	NM_175687.1	A230050P20Rik	NP_783618.1	ILMN_2747472	002690091	S	1226	ACATAACAGCTTTCTTCAGAGAGTACGCCCCACCACGGAACTCGGCCCAG	9	+	20678348-20678397	9qA3	Mus musculus RIKEN cDNA A230050P20 gene (A230050P20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_236280	ILMN_236280	EMR4	NM_139138.1	NM_139138.1		52614	20982826	NM_139138.1	Emr4	NP_631877.1	ILMN_2857422	005310491	S	2805	CCCAGGGGAGGGCACATTAATTGGTTATCTAATACAAAATGTTCAGCCCC	17	+	55446157-55446206	17qC-qD	Mus musculus EGF-like module containing, mucin-like, hormone receptor-like sequence 4 (Emr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence ISA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	EGF-TM7; D17Ertd479e; Gpr127; FIRE	EGF-TM7; D17Ertd479e; Gpr127; FIRE
Mus musculus	MEEBO	ILMN_192009	ILMN_192009	D730045A05RIK	scl51777.3.1_42						D730045A05Rik		ILMN_2484171	003060445	S	18	CGCGCTTCGAACTGTACCTGAGATCCCTGCCCTCAGCGTCATCATTGCCA										
Mus musculus	MEEBO	ILMN_213183	ILMN_213183	PCDHA2	scl0353234.1_242				51092276	NM_198117	Pcdha2		ILMN_2634519	000770576	S	2307	GCCTTCAGCCCTAGCCTATCCCAAGGTCCGGAATCAGCAGAAGAGAGACA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216813	ILMN_259482	SLC25A23	NM_025877.3	NM_025877.3		66972	70980533	NM_025877.3	Slc25a23	NP_080153.2	ILMN_2675672	006980253	S	3123	CCCCTGGGCTCCCACCACATTCCCATACCCTCCACACTTCAAGATTGGAT	17	-	57183323-57183372	17qD	Mus musculus solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 (Slc25a23), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2310067G05Rik	2310067G05Rik
Mus musculus	RefSeq	ILMN_223263	ILMN_223263	CIRBP	NM_007705.2	NM_007705.2		12696	133893062	NM_007705.2	Cirbp	NP_031731.1	ILMN_2761594	006980576	S	972	TGGCGCCCCACCCCTCCTGAGATGGAATGGACTCGATTTGAGCAAGCCAT	10	+	79634114-79634163	10qC1	Mus musculus cold inducible RNA binding protein (Cirbp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	R74941; Cirp	R74941; Cirp
Mus musculus	Riken	ILMN_202941	ILMN_202941	A930006A19RIK	ri|A930006A19|PX00065M15|AK044293|1324					AK044293	A930006A19Rik		ILMN_1224915	007650563	S	1205	GCCTTTAACCCTGGCAGTTTGGGAGGCAGAGGTGAGTGGTTCTCTGAGTT										
Mus musculus	RefSeq	ILMN_189141	ILMN_243715	EG545878	XM_620367.3	XM_620367.3		545878	94378130	XM_620367.3	EG545878	XP_620367.1	ILMN_2458710	001090296	S	1239	AATATGAAGCTCCCCAAACCACAGATGGCCTGGCTGGGGCCCTAGATGCC	6	+	128596084-128596133	6qF3	PREDICTED: Mus musculus predicted gene, EG545878, transcript variant 1 (EG545878), mRNA.					
Mus musculus	RefSeq	ILMN_189141	ILMN_243715	EG545878	XM_620367.3	XM_620367.3		545878	94378130	XM_620367.3	EG545878	XP_620367.1	ILMN_1259958	000070537	S	224	CCCAAAGATGCCTTCCGAGCAGTGAAGAAGCGAATTATGGGGAATAAGAA	6	+	128595069-128595118	6qF3	PREDICTED: Mus musculus predicted gene, EG545878, transcript variant 1 (EG545878), mRNA.					
Mus musculus	Riken	ILMN_205386	ILMN_205386	D930036N18RIK	ri|D930036N18|PX00203A24|AK053058|3590					AK053058	D930036N18Rik		ILMN_1253487	000730053	S	3084	GATGCTTGACGGCAAATCCGTACCTGCCTCCAGTTTCTAATGCTAGGGAC										
Mus musculus	RefSeq	ILMN_215432	ILMN_247832	ATP8B2	NM_001081182.1	NM_001081182.1		54667	124487146	NM_001081182.1	Atp8b2	NP_001074651.1	ILMN_2659415	003450356	S	3872	GGGGAGCTCATTATGTCTGGCAAGAACATGCGGCTTAGCTCCCTGGCCCT	3	-	89745186-89745235	3qF1	Mus musculus ATPase, class I, type 8B, member 2 (Atp8b2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	Id	Id
Mus musculus	RefSeq	ILMN_200923	ILMN_200923	LOC386493	XM_359343.1	XM_359343.1			38087091	XM_359343.1	LOC386493		ILMN_1233431	000940008	S	1078	CATATTCTTGGATTCAAATTCAAGTTTTACCAGGTTCATCAGATGAGATA										
Mus musculus	RefSeq	ILMN_225558	ILMN_225558	NEK10	NM_001034865.1	NM_001034865.1		238944	85702206	NM_001034865.1	Nek10	NP_001030037.1	ILMN_3011093	003140438	I	2755	GGCCTTTGTCACTGTCCATGTGGCTTCTGCTCTCCTTTCTTGCTGAACAC	14	+	13764368-13764417	14qA2	Mus musculus NIMA (never in mitosis gene a)- related kinase 10 (Nek10), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]	Gm282	Gm282
Mus musculus	RefSeq	ILMN_191994	ILMN_249462	PML	NM_008884.4	NM_008884.4		18854	145966800	NM_008884.4	Pml	NP_032910.2	ILMN_2732576	002650326	S	3589	GTGTTTTCCAGATAGCCCAGAGTTCCAGCTTTGACAGCCTGATGACCTCC				9qB	Mus musculus promyelocytic leukemia (Pml), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle [goid 6977] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I [goid 45343] [evidence IDA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of PML bodies, a class of nuclear body; they react against SP100 auto-antibodies (PML = promyelocytic leukemia) [goid 30578] [evidence IDA];  [goid 7182] [evidence IMP];  [goid 7184] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Trim19; AI661194; 1200009E24Rik	Trim19; AI661194; 1200009E24Rik
Mus musculus	RefSeq	ILMN_199051	ILMN_199051	LOC216178	XM_125802.2	XM_125802.2			38090628	XM_125802.2	LOC216178		ILMN_1217990	004210044	S	964	GCCACAAACAACACTATTAAACGCTTGGATGTGGAGAGCTTGCCCCCCAC										
Mus musculus	RefSeq	ILMN_221200	ILMN_319037	2810025M15RIK	XR_035184.1	XR_035184.1		69953	149245229	XR_035184.1	2810025M15Rik		ILMN_1213985	004210152	S	1044	CAACATCACTTCTGCTGTCACAGTCAAACCGGCCATCAGGAGACTGAAGG	1	+	159350217-159350266	1qH1	PREDICTED: Mus musculus RIKEN cDNA 2810025M15 gene (2810025M15Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_223056	ILMN_223056	BNC1	NM_007562.1	NM_007562.1		12173	34916061	NM_007562.1	Bnc1	NP_031588.1	ILMN_2910258	007320561	S	3758	CTGCAGTGTCTGTTGGCCCACTGGGGTGAGTGTAAGCGGGATTCTGACTA	7	-	89112350-89112399	7qD3	Mus musculus basonuclin 1 (Bnc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI047752; AW546376; Bnc	AI047752; AW546376; Bnc
Mus musculus	MEEBO	ILMN_221546	ILMN_221546	5730416F02RIK	scl54683.4.267_43	XM_142024.3			38086588	XM_142024.3	5730416F02Rik		ILMN_2737045	003520170	S	888	ACACGACTGGGGTGGTCCGTGGCAAGGGTGGGTGTCCCCATCTTTGCTCT										
Mus musculus	RefSeq	ILMN_256035	ILMN_256035	EG574403	NM_001025382.1	NM_001025382.1		574403	85701577	NM_001025382.1	EG574403	NP_001020553.1	ILMN_3162060	007210433	S	4890	ACACTCAGTATCCCTGGAACTTAATGCCAGCTCATCTGTAGAGCGCCTTC	11	+	34322498-34322547	11qA4	Mus musculus predicted gene, EG574403 (EG574403), mRNA.				MGC99845	MGC99845
Mus musculus	MEEBO	ILMN_190080	ILMN_190080	2810484G07RIK	scl19816.1.472_29						2810484G07Rik		ILMN_2467007	002450440	S	8	GCCCACGACTCTGCGGAGTCAGCTGCATACTTAACCTGGACACTTCCACT										
Mus musculus	RefSeq	ILMN_208800	ILMN_208800	ANPEP	NM_008486.1	NM_008486.1		16790	6678663	NM_008486.1	Anpep	NP_032512.1	ILMN_2589651	004150193	S	2948	GAACCACTTGTCCCAGTATGACACCTCTTACTATCTCAGCAGCCTGTGCA	7	-	86967046-86967095	7qD3	Mus musculus alanyl (membrane) aminopeptidase (Anpep), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IDA]	Apn; Lap-1; Cd13; p150; Lap1	Apn; Lap-1; Cd13; p150; Lap1
Mus musculus	MEEBO	ILMN_192400	ILMN_192400	4833424P18RIK	scl22268.8_269				29826331	NM_029017	4833424P18Rik		ILMN_1229069	003360309	S	20	CTCAAAATTGTAATAAACCATTTCCAGAAAACCCAGAGTGGTGTTCTAGG										
Mus musculus	RefSeq	ILMN_198084	ILMN_235913	LOC243025	XM_914571.2	XM_914571.2		243025	94374576	XM_914571.2	LOC243025	XP_919664.1	ILMN_1252253	002000360	S	751	GGAGGTGGCTCTGTGAAGCTGAGCACTTTGAGCATGAGGGTTATTCCAGG				5qC3.1	PREDICTED: Mus musculus gene model 446, (NCBI) (LOC243025), mRNA.					
Mus musculus	RefSeq	ILMN_185506	ILMN_310526	LOC546630	XM_001472313.1	XM_001472313.1		546630	149266182	XM_001472313.1	LOC546630	XP_001472363.1	ILMN_2427592	007650609	S	133	TTGTTGCTGTGCTTCTGGCTGCAGCTGAACTGTGTGAGCAGAGGCGAGCA	14	+	53218479-53218509:53218674-53218692		PREDICTED: Mus musculus similar to TRAV3-1 (LOC546630), mRNA.					
Mus musculus	MEEBO	ILMN_222115	ILMN_222115	4933428P19RIK	scl5798.1.1_76	NM_183295.1			34304106	NM_183295.1	4933428P19Rik		ILMN_2744842	002260026	S	1059	ACTGCTCAAGTTCATAGGCAAGAATCTTTCACCACTAATGTATTACGCTA										
Mus musculus	RefSeq	ILMN_209793	ILMN_209793	MS4A4B	NM_021718.2	NM_021718.2		60361	114796633	NM_021718.2	Ms4a4b	NP_068364.1	ILMN_2599273	005550475	S	882	AGATTTACTGTAAGTATGTAAGTCAAGCACTTATTAGGTCAACAACACTT	19	+	11537662-11537711	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 4B (Ms4a4b), mRNA. XM_001000154	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]			Ly116; AI463180; Chandra	Ly116; AI463180; Chandra
Mus musculus	RefSeq	ILMN_223331	ILMN_223331	ENPP6	NM_177304.2	NM_177304.2		320981	31343292	NM_177304.2	Enpp6	NP_796278.1	ILMN_2762651	002230743	S	1507	GTGATTCTACCCACAAAAGTCCCTTCTGGGGAAAAAAACTGCAAAATTCG	8	+	48592154-48592203	8qB1.1	Mus musculus ectonucleotide pyrophosphatase/phosphodiesterase 6 (Enpp6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 19695] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IDA]	B830047L21Rik; 4833421B01Rik; D8Ertd514e; Npp6	B830047L21Rik; 4833421B01Rik; D8Ertd514e; Npp6
Mus musculus	RefSeq	ILMN_219417	ILMN_219417	4930583H14RIK	NM_026358.2	NM_026358.2		67749	142365257	NM_026358.2	4930583H14Rik	NP_080634.1	ILMN_1250001	004860753	S	1070	CTGAGTTATCTATGCAACCGGTGTCACTTTGATTTTCCTTTGCCTTTCTC	3	-	51192407-51192456	3qC	Mus musculus RIKEN cDNA 4930583H14 gene (4930583H14Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI195347; Osap	AI195347; Osap
Mus musculus	RefSeq	ILMN_200115	ILMN_200115	LOC385758	XM_358933.1	XM_358933.1			38080470	XM_358933.1	LOC385758		ILMN_1218577	000520768	S	1176	CCCCAGGATGAGACACAGACCTTGGAATAAGGGAGGCGCCCAAGAATCTG										
Mus musculus	MEEBO	ILMN_221963	ILMN_221963	GUCY1A2	scl37322.5_382	XM_150145.3			38089704	XM_150145.3	Gucy1a2		ILMN_2742712	003290612	S	2708	TAATTATATGGAACACACAGCAGATGCTAACTTAGACTCTGAGTGGGAAG							Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP [goid 30828] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]		
Mus musculus	Riken	ILMN_207419	ILMN_207419	F630107D10RIK	ri|F630107D10|PL00015L18|AK089256|2342					AK089256	F630107D10Rik		ILMN_1233687	002100730	S	2099	GAAGATGGGGCCTAAAAGCCAGACAGCCAACTTCCTTTTCTCTGGTCCTC										
Mus musculus	Riken	ILMN_203672	ILMN_203672	9530021H06RIK	ri|9530021H06|PX00111M24|AK035352|2538					AK035352	9530021H06Rik		ILMN_1257371	000070273	S	2452	TGCTTCCTGAGCCCAGGGATTCTCAGGTATGCACTCCAATACTCGGCCCG										
Mus musculus	RefSeq	ILMN_186555	ILMN_186555	ZFP239	NM_008616.2	NM_008616.2		22685	49087121	NM_008616.2	Zfp239	NP_032642.2	ILMN_3127381	001500500	A	2124	GGCCAGAGTCCCATGGATCTAACTGTCTCCACTTCCCAGCTCACCGTGGC	6	+	117822275-117822324	6qF1	Mus musculus zinc finger protein 239 (Zfp239), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Mok-2; Mok2	Mok-2; Mok2
Mus musculus	RefSeq	ILMN_186555	ILMN_186555	ZFP239	NM_008616.2	NM_008616.2		22685	49087121	NM_008616.2	Zfp239	NP_032642.2	ILMN_2436530	002000504	S	2473	TTCTACATTTTTTAACTGCAAGAACTCTGTATTTTTCCAAGCACAGCATG	6	+	117822624-117822673	6qF1	Mus musculus zinc finger protein 239 (Zfp239), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Mok-2; Mok2	Mok-2; Mok2
Mus musculus	Riken	ILMN_206804	ILMN_206804	A730010D03RIK	ri|A730010D03|PX00149A17|AK080425|738					AK080425	A730010D03Rik		ILMN_2582820	000380349	S	446	GCCTGGGCTACAGCGAGACGCCTCCTAAAACAAAAACAAGCCAGGTGGTG										
Mus musculus	RefSeq	ILMN_197384	ILMN_197384	LOC380881	XM_354790.1	XM_354790.1			38075515	XM_354790.1	LOC380881		ILMN_1242152	007210743	S	1548	GTGGCGGAGATTCCCTTTAACTCCACCAACAAGTATCAGGTACAGAACTG										
Mus musculus	RefSeq	ILMN_209412	ILMN_209412	CALCRL	NM_018782.1	NM_018782.1		54598	9055257	NM_018782.1	Calcrl	NP_061252.1	ILMN_1235390	000650138	S	4023	TCTAATACTTTGTTAGAGTCATGGCTGACACTTTTAGAAGCGACTTTGTA	2	-	84171124-84171173	2qD	Mus musculus calcitonin receptor-like (Calcrl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the rate or extent of smooth muscle cell proliferation [goid 48661] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with calcitonin to initiate a change in cell activity [goid 4948] [evidence IEA];  [goid 1635] [evidence IGI]	CRLR; AV071593	CRLR; AV071593
Mus musculus	RefSeq	ILMN_197868	ILMN_319968	LOC666194	XR_032523.1	XR_032523.1		666194	149253285	XR_032523.1	LOC666194		ILMN_1259594	001660707	S	2751	CTGCTACAGGGGCTGATGGTTGCCCTCTTGAGCCGTTGGGAAACCTCTCA	4	-	144135789-144135838	4qE1	PREDICTED: Mus musculus similar to Integrator complex subunit 5 (LOC666194), misc RNA.					
Mus musculus	RefSeq	ILMN_214481	ILMN_241582	MYST3	NM_001081149.1	NM_001081149.1		244349	124487238	NM_001081149.1	Myst3	NP_001074618.1	ILMN_2648416	003780332	S	3474	CCAGAGAGTCCCCGGTCAAACTCGCCACCAATTCTCACGAAGCCCACACT	8	+	24043127-24043176	8qA2	Mus musculus MYST histone acetyltransferase (monocytic leukemia) 3 (Myst3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1500036M03; Zfp220; MOZ; 9930021N24Rik	1500036M03; Zfp220; MOZ; 9930021N24Rik
Mus musculus	RefSeq	ILMN_226094	ILMN_226094	MTHFD1	NM_138745.1	NM_138745.1		108156	20270274	NM_138745.1	Mthfd1	NP_620084.1	ILMN_2960407	007150484	S	2800	CCTTTAGTAGGAACGATGAGCACAATGCCTGGACTCCCTACGAGGCCCTG	12	+	77416074-77416088:77418594-77418628	12qC3	Mus musculus methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase (Mthfd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 105] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IMP]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + NADP+ + H2O = tetrahydrofolate + CO2 + NADPH + H+ [goid 16155] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: ATP + formate + tetrahydrofolate = ADP + phosphate + 10-formyltetrahydrofolate [goid 4329] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP+ = 5,10-methenyltetrahydrofolate + NADPH + H+ [goid 4488] [evidence IEA]; Catalysis of the reaction: 5,10-methenyltetrahydrofolate + H2O = 10-formyltetrahydrofolate [goid 4477] [evidence IEA]	E430024A07Rik; DCS; NEUT2; Mthfd	E430024A07Rik; DCS; NEUT2; Mthfd
Mus musculus	RefSeq	ILMN_221769	ILMN_239093	RASSF6	NM_028478.2	NM_028478.2		73246	110431379	NM_028478.2	Rassf6	NP_082754.2	ILMN_2740069	005720544	S	1636	CAAGGGCTGATGATTTTAAACTCTGAAGTATCAGAGTACCCGACCTTTTA	5	-	91032374-91032423	5qE1	Mus musculus Ras association (RalGDS/AF-6) domain family member 6 (Rassf6), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1600016B17Rik	1600016B17Rik
Mus musculus	RefSeq	ILMN_200085	ILMN_239093	RASSF6	NM_028478.2	NM_028478.2		73246	110431379	NM_028478.2	Rassf6	NP_082754.2	ILMN_1233255	007570400	S	49	AACTTGGAGGTTGAAGCGAAGAGCCCCGCTCAGTCCACACACAGGCACAC	5	-	91069415-91069464	5qE1	Mus musculus Ras association (RalGDS/AF-6) domain family member 6 (Rassf6), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1600016B17Rik	1600016B17Rik
Mus musculus	RefSeq	ILMN_222715	ILMN_222715	STRA6	NM_009291.1	NM_009291.1		20897	6678170	NM_009291.1	Stra6	NP_033317.1	ILMN_2753792	001300475	S	2551	GCTTGTCCACCAGGCTACCAGCTAGGGCTCTAGAGAAAGCAGCTAGTGGT	9	+	58001318-58001367	9qB	Mus musculus stimulated by retinoic acid gene 6 (Stra6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI891933	AI891933
Mus musculus	RefSeq	ILMN_214328	ILMN_214328	OLFR176	NM_146993.1	NM_146993.1		258995	22128948	NM_146993.1	Olfr176	NP_667204.1	ILMN_2646904	004730619	S	877	AGAAATAAAGAAGTGATTAATGTGATGAAAGAACAATGCAGAGACAATTG	16	-	58814478-58814527		Mus musculus olfactory receptor 176 (Olfr176), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR184-8	MOR184-8
Mus musculus	MEEBO	ILMN_216826	ILMN_216826	PHOX2B	scl26531.3.1_70	NM_008888.1			6679400	NM_008888.1	Phox2b		ILMN_2675812	006220736	S	1292	CGCGATTCGAAAAAACAACGAGAAAATGACGTCGCTCCATTTCAACCCCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21533] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217133	ILMN_217133	1110058L19RIK	NM_026503.2	NM_026503.2		68002	142376292	NM_026503.2	1110058L19Rik	NP_080779.1	ILMN_2679428	003370338	S	300	CGGAGCCTACACGATATGGAGACTGGGAACGGAAGGGACGCTGCATTGAC	1	-	24003095-24003144	1qA5	Mus musculus RIKEN cDNA 1110058L19 gene (1110058L19Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			C6orf57; AI847425; 1700001E18Rik	C6orf57; AI847425; 1700001E18Rik
Mus musculus	RefSeq	ILMN_218827	ILMN_218827	MAGEB18	NM_173783.3	NM_173783.3		215641	142372036	NM_173783.3	Mageb18	NP_776144.1	ILMN_2700728	002140121	S	2103	GTATGTACTTTGATTTGTTTTACTAAGAAATTTAGGTGATAATAAAGTTT	X	-	89364225-89364274	XqC2-qC3	Mus musculus melanoma antigen family B, 18 (Mageb18), mRNA.				B430216B18Rik	B430216B18Rik
Mus musculus	RefSeq	ILMN_222548	ILMN_222548	OBOX3	NM_145707.2	NM_145707.2		246791	31560755	NM_145707.2	Obox3	NP_663753.2	ILMN_3069117	005080341	I	1316	TTTGAATCTCAAACTGACTTAGCAGTAGCTGAAGTTCCAGTCGGCCTGGC	7	-	16211250-16211299	7qA2	Mus musculus oocyte specific homeobox 3 (Obox3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222548	ILMN_222548	OBOX3	NM_145707.2	NM_145707.2		246791	31560755	NM_145707.2	Obox3	NP_663753.2	ILMN_3147577	004730309	A	742	GCAAGAGTCTCAAGGACCAACAAGACAATCAGGTCGTATGCCACTGTCAG	7	-	16212294-16212343	7qA2	Mus musculus oocyte specific homeobox 3 (Obox3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_225896	ILMN_225896	BC066028	NM_001001180.2	NM_001001180.2		407812	142383654	NM_001001180.2	BC066028	NP_001001180.2	ILMN_3162180	004280341	S	3704	CTGGATTGCACACAGCTATCAGCTGCTATTTGGTTGCTGGCTGCCAACTG	7	-	147995731-147995780	7qF5	Mus musculus cDNA sequence BC066028 (BC066028), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189585	ILMN_189585	TXNDC1	NM_028339.1	NM_028339.1		72736	33859721	NM_028339.1	Txndc1	NP_082615.1	ILMN_1232489	007050598	S	2024	ACAAAGTGGGAAGGGTATCATGGGGGCAGGGACTGTCTTGATGTCTGGAG	12	+	71568315-71568364	12qC2	Mus musculus thioredoxin domain containing 1 (Txndc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		AI465319; 2810425A04Rik	AI465319; 2810425A04Rik
Mus musculus	RefSeq	ILMN_219390	ILMN_219390	C80913	NM_011274.4	NM_011274.4		19777	142385360	NM_011274.4	C80913	NP_035404.3	ILMN_2708150	003780468	S	2074	CTGGCTTCGTTAATTCTGTGACTACTGTCTAATTGGCCTTAGGATGCAGG	7	-	38746328-38746377	7qB2	Mus musculus expressed sequence C80913 (C80913), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			NNX3; Rmp	NNX3; Rmp
Mus musculus	RefSeq	ILMN_256958	ILMN_256958	ZFP760	NM_001008501.1	NM_001008501.1		240034	56605853	NM_001008501.1	Zfp760	NP_001008501.1	ILMN_2877253	004070603	S	3817	GGAAGGGAAAAGGGCTATCCAAGTCTTCAATAGGCAGACACAGGGGGATC	17	+	21862211-21862260	17qA3.2-qA3.3	Mus musculus zinc finger protein 760 (Zfp760), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	9430018I06; MGC105247; BC029103	9430018I06; MGC105247; BC029103
Mus musculus	RefSeq	ILMN_215553	ILMN_215553	1700013N18RIK	NM_028502.2	NM_028502.2		73318	34328314	NM_028502.2	1700013N18Rik	NP_082778.1	ILMN_2868571	001300167	S	1202	CTGGTCAACAAAAATAGATTGGCGCTATGGGCCCATAAAGTGTGACTGGC	5	+	108071756-108071805	5qF	Mus musculus RIKEN cDNA 1700013N18 gene (1700013N18Rik), mRNA.		The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]		
Mus musculus	Riken	ILMN_205426	ILMN_205426	E330019D12RIK	ri|E330019D12|PX00211L12|AK054358|2820					AK054358	E330019D12Rik		ILMN_2572467	006280154	S	2753	TTCCTTTTTGAAGGTTATTTTGGCCACCTCCTGCCACTCGAGATTCCACG										
Mus musculus	RefSeq	ILMN_219579	ILMN_219579	SRGAP3	NM_080448.3	NM_080448.3		259302	125345725	NM_080448.3	Srgap3	NP_536696.3	ILMN_2799648	003190458	S	3232	AGCCCGGCAGTGACACCCACGGAGAAGATGTTCCCTAATAGCTCCTCGGA	6	-	112672800-112672849	6qE3	Mus musculus SLIT-ROBO Rho GTPase activating protein 3 (Srgap3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130026O08Rik; WRP; AI452337; Gbi; mKIAA0411; MEGAP; Arhgap14	D130026O08Rik; WRP; AI452337; Gbi; mKIAA0411; MEGAP; Arhgap14
Mus musculus	RefSeq	ILMN_218526	ILMN_218526	SREBF1	NM_011480.1	NM_011480.1		20787	27753980	NM_011480.1	Srebf1	NP_035610.1	ILMN_2792089	006840156	S	3826	TGCCTCAGCTGATTGCTATCTTTCCTGGCTTGTCCTTTGGGAAGCCGGAC	11	-	60015707-60015756	11qB2	Mus musculus sterol regulatory element binding factor 1 (Srebf1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment [goid 9267] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with the sterol response element (SRE), a nonpalindromic sequence found in the promoters of genes involved in lipid metabolism [goid 32810] [evidence ISS]	SREBP-1c; SREBP-1; D630008H06; SREBP-1a; ADD1; SREBP1; ADD-1	SREBP-1c; SREBP-1; D630008H06; SREBP-1a; ADD1; SREBP1; ADD-1
Mus musculus	RefSeq	ILMN_260122	ILMN_260122	NRAS	NM_010937.2	NM_010937.2		18176	111154108	NM_010937.2	Nras	NP_035067.2	ILMN_2837543	002630142	S	4217	ACGGGAAGGTGGGTGGAAGTTGTTTGGCTTCCGTATTTCCATGCGTGCCG	3	+	102871584-102871633	3qF2.2	Mus musculus neuroblastoma ras oncogene (Nras), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AV095280; N-ras	AV095280; N-ras
Mus musculus	MEEBO	ILMN_186607	ILMN_186607	2010109I03RIK	scl47075.4_334				13385421	NM_025929	2010109I03Rik		ILMN_2436984	000940156	S	19	CAGTATTCACTCCAGAATGGTTTTCCATGCTGTAGGCCTCCATCCCTCAG										
Mus musculus	RefSeq	ILMN_190442	ILMN_239488	AMFR	NM_011787.2	NM_011787.2		23802	113205072	NM_011787.2	Amfr	NP_035917.2	ILMN_2722902	003450241	S	3023	GATGTTGAATAATCCACATGCCTCAAGCAGACTCGGTCCCAGATCGGCTC	8	-	96496093-96496142	8qC5	Mus musculus autocrine motility factor receptor (Amfr), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	gp78	gp78
Mus musculus	RefSeq	ILMN_190442	ILMN_239488	AMFR	NM_011787.2	NM_011787.2		23802	113205072	NM_011787.2	Amfr	NP_035917.2	ILMN_2470210	002000750	S	3302	AGGTGAAGATAATTTATTTCAATAAATCTTTCAAAAGCCTTACCTTGAAC	8	-	96495814-96495863	8qC5	Mus musculus autocrine motility factor receptor (Amfr), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	gp78	gp78
Mus musculus	RefSeq	ILMN_217782	ILMN_217782	UQCC	NM_018888.2	NM_018888.2		56046	142363077	NM_018888.2	Uqcc	NP_061376.1	ILMN_2687534	003780326	S	601	AGAAGAACATGGCCCTCATGACGAACAATTTCTATGCAGCAATCTTGGGA	2	-	155683848-155683897	2qH1	Mus musculus ubiquinol-cytochrome c reductase complex chaperone, CBP3 homolog (yeast) (Uqcc), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	Bfzp; mbFZb; 2410003P15Rik; 2310079L17Rik; Bfzb; 3110038N19Rik	Bfzp; mbFZb; 2410003P15Rik; 2310079L17Rik; Bfzb; 3110038N19Rik
Mus musculus	RefSeq	ILMN_240932	ILMN_240932	MUP1	NM_031188.1	NM_031188.1		17840	13654244	NM_031188.1	Mup1	NP_112465.1	ILMN_2875730	004260767	S	644	CCCGAGAATGAAGAATGGCCTGAGCCTCCAGTGTTGAGTGGAGACTTCTC	4	-	60511117-60511136:60511928-60511947:60511948-60511957	4qB3	Mus musculus major urinary protein 1 (Mup1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Mup-1; Ltn-1; Lvtn-1; 2610016E04Rik; Mup-a; Up-1	Mup-1; Ltn-1; Lvtn-1; 2610016E04Rik; Mup-a; Up-1
Mus musculus	Riken	ILMN_207146	ILMN_207146	DFNA5H	ri|F730034N01|PL00003F13|AK089459|2934					AK089459	Dfna5h		ILMN_1251913	005420040	S	2614	CTAGATGCCTGAAAGCAAAGAAGGGAAAAGGAACACAGAGCACCAGTGGC										
Mus musculus	RefSeq	ILMN_209487	ILMN_209487	LNPEP	NM_172827.1	NM_172827.1		240028	27370239	NM_172827.1	Lnpep	NP_766415.1	ILMN_2682845	003390601	S	1800	TACCTGCACAATCACAGCTATGCAGCTATCCAAAGTGATGATCTCTGGGA	17	-	17267383-17267432	17qA3.2	Mus musculus leucyl/cystinyl aminopeptidase (Lnpep), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	gp160; PLAP; IRAP; 2010309L07Rik; vp165; 4732490P18Rik; CAP	gp160; PLAP; IRAP; 2010309L07Rik; vp165; 4732490P18Rik; CAP
Mus musculus	RefSeq	ILMN_209487	ILMN_209487	LNPEP	NM_172827.1	NM_172827.1		240028	27370239	NM_172827.1	Lnpep	NP_766415.1	ILMN_2822915	005290634	S	4706	TGGCTGACAAGCTGAAAATAGCCTGCTTTAATCCTAGAGTTTGCTCCCAA	17	-	17232766-17232815	17qA3.2	Mus musculus leucyl/cystinyl aminopeptidase (Lnpep), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	gp160; PLAP; IRAP; 2010309L07Rik; vp165; 4732490P18Rik; CAP	gp160; PLAP; IRAP; 2010309L07Rik; vp165; 4732490P18Rik; CAP
Mus musculus	RefSeq	ILMN_247624	ILMN_247624	EG667977	NM_001081032.1	NM_001081032.1		667977	124486637	NM_001081032.1	EG667977	NP_001074501.1	ILMN_2835683	000270367	S	456	ATTTCAGAGGATGTACGGCTGTGACCTGGGGTCGGACGGGCGCCTCCTCC	17	-	36304593-36304642	17qB1	Mus musculus predicted gene, EG667977 (EG667977), mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		H2-gs17	H2-gs17
Mus musculus	RefSeq	ILMN_216808	ILMN_216808	PHYHIP	NM_145981.3	NM_145981.3		105653	142360820	NM_145981.3	Phyhip	NP_666093.1	ILMN_1223321	001260327	S	2428	TGTCATAGTAACATTTTCCGAGGTGACAGAGATGATACACAGGCAGCTGG	14	+	70868270-70868319	14qD2	Mus musculus phytanoyl-CoA hydroxylase interacting protein (Phyhip), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C630010D02Rik; PAHX-AP#1; Lnap1ip; PAHX-AP1; MGC40960; AW049870	C630010D02Rik; PAHX-AP#1; Lnap1ip; PAHX-AP1; MGC40960; AW049870
Mus musculus	RefSeq	ILMN_196570	ILMN_196570	GZMN	NM_153052.1	NM_153052.1		245839	23346542	NM_153052.1	Gzmn	NP_694692.1	ILMN_1229426	006060128	S	709	CGGGGGGACCCCTCGTGTGTAACAACAAAGCTCATGGAGTTTTGTCTTAT	14	-	56784828-56784877	14qC3	Mus musculus granzyme N (Gzmn), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	GrN	GrN
Mus musculus	RefSeq	ILMN_184640	ILMN_318829	LOC100047839	XM_001479252.1	XM_001479252.1		100047839	149269367	XM_001479252.1	LOC100047839	XP_001479302.1	ILMN_2507151	000940739	S	636	AACAAGGTGTAAAAAGTCCGCTTACAAAAATCAAATAAACATGACTTGTA					PREDICTED: Mus musculus hypothetical protein LOC100047839 (LOC100047839), mRNA.					
Mus musculus	RefSeq	ILMN_184640	ILMN_318829	LOC100047839	XM_001479252.1	XM_001479252.1		100047839	149269367	XM_001479252.1	LOC100047839	XP_001479302.1	ILMN_1226882	001030671	S	715	GGGGCTCATGCCTGTCTCTTGAGTGTGAAATACAAGTCATGTTTATTTGA					PREDICTED: Mus musculus hypothetical protein LOC100047839 (LOC100047839), mRNA.					
Mus musculus	RefSeq	ILMN_202715	ILMN_318829	LOC100047839	XM_001479252.1	XM_001479252.1		100047839	149269367	XM_001479252.1	LOC100047839	XP_001479302.1	ILMN_1257609	004730487	S	580	AAGCCTGCACATAAAAGACAGGTATTTTATTCTTTTAATAAGAAACTTAT					PREDICTED: Mus musculus hypothetical protein LOC100047839 (LOC100047839), mRNA.					
Mus musculus	RefSeq	ILMN_198348	ILMN_198348	LOC332319	XM_288852.2	XM_288852.2			38084142	XM_288852.2	LOC332319		ILMN_2531374	006860187	S	168	AGAACCCTGGGCGTCCCCAAGGAGGCTGGACTCAGGAGGTTGCGATATGT										
Mus musculus	RefSeq	ILMN_211084	ILMN_211084	STX18	NM_026959.2	NM_026959.2		71116	77736534	NM_026959.2	Stx18	NP_081235.2	ILMN_2612350	000130670	S	729	AGCCCGAACTGGGAACCTGGGGCGATGGCAAGGGTGAAGATGAGCTGTCT	5	+	38512471-38512520	5qB3	Mus musculus syntaxin 18 (Stx18), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	1810035L21Rik; AU041562; 4933425D03Rik	1810035L21Rik; AU041562; 4933425D03Rik
Mus musculus	RefSeq	ILMN_210500	ILMN_210500	PPP2R1A	NM_016891.3	NM_016891.3		51792	118131166	NM_016891.3	Ppp2r1a	NP_058587.1	ILMN_2606243	003870735	S	1513	AGCCATGTCTGGAGACCCTAACTACCTGCACCGAATGACTACACTCTTCT	17	+	21098646-21098695	17qA3.2	Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform (Ppp2r1a), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	6330556D22Rik; PR65; PP2A	6330556D22Rik; PR65; PP2A
Mus musculus	RefSeq	ILMN_201169	ILMN_201169	LOC384885	XM_357917.1	XM_357917.1			38089611	XM_357917.1	LOC384885		ILMN_1259907	003890100	S	116	GAATCCTCATCATACAATGGTGCTCAGGGGAAAACTCAGGGGACCTGGGC										
Mus musculus	Riken	ILMN_205874	ILMN_205874	C130063I20RIK	ri|C130063I20|PX00170H20|AK048470|4069					AK048470	C130063I20Rik		ILMN_1226971	001110528	S	3491	CCAGAGGACAGCTTTGGGGAGCCAATCCTCTTCTGTTGGGGTTTCAGCCC										
Mus musculus	RefSeq	ILMN_214004	ILMN_214004	GPHB5	NM_175644.3	NM_175644.3		217674	118130284	NM_175644.3	Gphb5	NP_783575.2	ILMN_1245716	007330180	S	1265	CCACAGCCACAGTGAGGTGACCAGTTACAAATGCCCTTCCCTCTTTAGTG	12	-	76513006-76513055	12qC3	Mus musculus glycoprotein hormone beta 5 (Gphb5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Zlut1	Zlut1
Mus musculus	RefSeq	ILMN_216862	ILMN_216862	HAP1	NM_010404.2	NM_010404.2		15114	30061485	NM_010404.2	Hap1	NP_034534.1	ILMN_2676214	003890736	S	2428	TTTCCGGCACTCCCTCTGAGGAGCTGTCTGGGAAATCAGATGACTTAGCA	11	-	100209815-100209864	11qD	Mus musculus huntingtin-associated protein 1 (Hap1), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC31449; HAP-1	MGC31449; HAP-1
Mus musculus	RefSeq	ILMN_213307	ILMN_216862	HAP1	NM_010404.2	NM_010404.2		15114	30061485	NM_010404.2	Hap1	NP_034534.1	ILMN_1230709	005570601	S	1151	TACATGCAGGATTATGGGAGCAGGCCTCGTGACCGCCAGGAGGATGGGAA	11	-	100212798-100212847	11qD	Mus musculus huntingtin-associated protein 1 (Hap1), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC31449; HAP-1	MGC31449; HAP-1
Mus musculus	RefSeq	ILMN_216862	ILMN_216862	HAP1	NM_010404.2	NM_010404.2		15114	30061485	NM_010404.2	Hap1	NP_034534.1	ILMN_2676208	000020056	S	2433	CGGCACTCCCTCTGAGGAGCTGTCTGGGAAATCAGATGACTTAGCATCGG	11	-	100209810-100209859	11qD	Mus musculus huntingtin-associated protein 1 (Hap1), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC31449; HAP-1	MGC31449; HAP-1
Mus musculus	RefSeq	ILMN_213307	ILMN_216862	HAP1	NM_010404.2	NM_010404.2		15114	30061485	NM_010404.2	Hap1	NP_034534.1	ILMN_1244829	001580309	S	3560	CCTGCTTCTGCAGCGCTTCATAGTCTTGTAGCTAGTCAGCCTTTGTATTG	11	-	100208683-100208732	11qD	Mus musculus huntingtin-associated protein 1 (Hap1), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC31449; HAP-1	MGC31449; HAP-1
Mus musculus	RefSeq	ILMN_212084	ILMN_312008	LOC100047888	XM_001479068.1	XM_001479068.1		100047888	149274464	XM_001479068.1	LOC100047888	XP_001479118.1	ILMN_1226290	005550605	S	2012	CCACATCCTGCCTGATGGACTTTATGCTTACAGTGTTCATGGTCCTATGG					PREDICTED: Mus musculus similar to Neurocan (LOC100047888), mRNA.					
Mus musculus	RefSeq	ILMN_212084	ILMN_312008	LOC100047888	XM_001479068.1	XM_001479068.1		100047888	149274464	XM_001479068.1	LOC100047888	XP_001479118.1	ILMN_1220260	003180333	S	1411	TATACTGATTTTAGTGATGTCTCTTAGAGCCACTGGCCTCCTTGGCTTCC					PREDICTED: Mus musculus similar to Neurocan (LOC100047888), mRNA.					
Mus musculus	RefSeq	ILMN_212084	ILMN_312008	LOC100047888	XM_001479068.1	XM_001479068.1		100047888	149274464	XM_001479068.1	LOC100047888	XP_001479118.1	ILMN_2654341	002570630	S	3629	ATTCAGAAGGAACCACACCAATCCCCTGCTGGGGATTGAGGGCGAGGCCT					PREDICTED: Mus musculus similar to Neurocan (LOC100047888), mRNA.					
Mus musculus	RefSeq	ILMN_212084	ILMN_312008	LOC100047888	XM_001479068.1	XM_001479068.1		100047888	149274464	XM_001479068.1	LOC100047888	XP_001479118.1	ILMN_2648883	004290468	S	530	CCACTATCCGCTGCCGTAACAATGGGAAGTGGGACCGGCCTCAGATCATG					PREDICTED: Mus musculus similar to Neurocan (LOC100047888), mRNA.					
Mus musculus	RefSeq	ILMN_212084	ILMN_312008	LOC100047888	XM_001479068.1	XM_001479068.1		100047888	149274464	XM_001479068.1	LOC100047888	XP_001479118.1	ILMN_2673025	000630056	S	3613	TTGGTAACATTTTCTAATTCAGAAGGAACCACACCAATCCCCTGCTGGGG					PREDICTED: Mus musculus similar to Neurocan (LOC100047888), mRNA.					
Mus musculus	RefSeq	ILMN_199100	ILMN_199100	LOC380670	XM_354575.1	XM_354575.1			38090905	XM_354575.1	LOC380670		ILMN_1230426	007610228	S	462	GCACAAACGTGGTGCCCAGGGAGACATGCAGGAAAAACATGGCTACATGT										
Mus musculus	RefSeq	ILMN_188615	ILMN_243663	TNFRSF22	NM_023680.3	NM_023680.3		79202	145386520	NM_023680.3	Tnfrsf22	NP_076169.2	ILMN_2467549	003780274	S	648	AAAGGTTCTACAGATGTTTTCTTAGCTTCCTTTTATTGCTATGAAGTGAT				7qF5	Mus musculus tumor necrosis factor receptor superfamily, member 22 (Tnfrsf22), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]	Interacting selectively with TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines [goid 45569] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	Tnfrh2; SOBa; mDcTrailr2; C130035G06Rik; Tnfrsf1al2; 2810028K06Rik	Tnfrh2; SOBa; mDcTrailr2; C130035G06Rik; Tnfrsf1al2; 2810028K06Rik
Mus musculus	MEEBO	ILMN_213214	ILMN_213214	1700008E09RIK	scl31364.1.6_68				21312277	NM_027055	1700008E09Rik		ILMN_2771466	000990427	S	413	ATCAACAAAGGCTGCGTGCACTCCACCAGCTGTGGCCGCGAGGAACCCAT										
Mus musculus	Riken	ILMN_204128	ILMN_204128	B130049M22RIK	ri|B130049M22|PX00158O08|AK045232|1501					AK045232	B130049M22Rik		ILMN_1258139	006980634	S	989	GGCACCATTTGGAGGTATGGCCTTGTTGGAATACTGCCTGGATACTGCCA										
Mus musculus	Riken	ILMN_205439	ILMN_205439	E330027M22RIK	ri|E330027M22|PX00212H23|AK054458|2358					AK054458	E330027M22Rik		ILMN_1221523	000060204	S	1973	CACCCTTGCTACAAATGCAGAGTCCCCTTGGTTCCTCAAGCCGTGGAGAC										
Mus musculus	RefSeq	ILMN_200189	ILMN_200189	LOC385894	XM_358988.1	XM_358988.1			38080854	XM_358988.1	LOC385894		ILMN_1241778	002510403	S	542	AACACCAGGGCCAAGAAGTGGGAGTGGTCCAATGGCTGACTGCAAGCATC										
Mus musculus	RefSeq	ILMN_201371	ILMN_201371	LOC385057	XM_358021.1	XM_358021.1			38093394	XM_358021.1	LOC385057		ILMN_1241770	002650392	S	258	GTTAGGCTTGTTGTCACCTGTGGGAATGCACGCAAGGGTAACCATCCGCC										
Mus musculus	RefSeq	ILMN_213505	ILMN_213505	PADI1	NM_011059.2	NM_011059.2		18599	118130215	NM_011059.2	Padi1	NP_035189.1	ILMN_2637742	001690201	S	3695	CTGGGGTCCTGGCTGACTGGCCACCGTCTTTCTCATCAATAAAAACATCG	4	-	140369013-140369059:140369828-140369830	4qD3	Mus musculus peptidyl arginine deiminase, type I (Padi1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of peptidyl-arginine to form peptidyl-citrulline [goid 18101] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3 [goid 4668] [evidence TAS]	AV236283; Pdi1	AV236283; Pdi1
Mus musculus	RefSeq	ILMN_215514	ILMN_215514	DPYSL4	NM_011993.3	NM_011993.3		26757	142344019	NM_011993.3	Dpysl4	NP_036123.2	ILMN_1222559	006250561	S	1789	TGGTGCTGTCCCCACTGGCAGGGTGTGGGGACGACTCACGTCAGTTAGCT	7	+	146286912-146286961	7qF4	Mus musculus dihydropyrimidinase-like 4 (Dpysl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CRMP-3; Ulip4; AI173505; DPY4; Drp-4; Crmp3	CRMP-3; Ulip4; AI173505; DPY4; Drp-4; Crmp3
Mus musculus	RefSeq	ILMN_217842	ILMN_217842	ZDHHC24	NM_027476.2	NM_027476.2		70605	142363793	NM_027476.2	Zdhhc24	NP_081752.1	ILMN_2697127	005310689	S	1373	GTGAGGGAGCTCTAGCAGCTCACCCGTATGCGGGACCACAGTTAGAATCT	19	+	4884244-4884293	19qA	Mus musculus zinc finger, DHHC domain containing 24 (Zdhhc24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	5730496N17Rik; Leng4	5730496N17Rik; Leng4
Mus musculus	RefSeq	ILMN_217842	ILMN_217842	ZDHHC24	NM_027476.2	NM_027476.2		70605	142363793	NM_027476.2	Zdhhc24	NP_081752.1	ILMN_1251104	007000743	S	1072	TTGGCAGAGGATGGTCTAGCAAGGGGGCTACTTGGCCTGACCGACTGCCC	19	+	4883943-4883992	19qA	Mus musculus zinc finger, DHHC domain containing 24 (Zdhhc24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	5730496N17Rik; Leng4	5730496N17Rik; Leng4
Mus musculus	RefSeq	ILMN_222189	ILMN_222189	PCDHGA2	NM_033585.1	NM_033585.1		93710	18087754	NM_033585.1	Pcdhga2	NP_291063.1	ILMN_2746009	004480301	S	2273	CGCTCACCGCAGACTCAGGGAAAAGCCACATTATCTTCCCTCAACCAAAC	18	+	37831031-37831080	18qB3	Mus musculus protocadherin gamma subfamily A, 2 (Pcdhga2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0588	mKIAA0588
Mus musculus	Riken	ILMN_205192	ILMN_205192	2310046M24RIK	ri|D030004I08|PX00179E20|AK050690|2359					AK050690	2310046M24Rik		ILMN_1220642	005570326	S	2139	GGGCTTGTCCAGGGGTCAGCCATCTTGCAGGCTCTCGTGTTTATACCAGC										
Mus musculus	MEEBO	ILMN_192447	ILMN_192447	H2-T18	scl0015033.1_49						H2-T18		ILMN_2488153	000450575	S	14	TCAAACCCTACATTAGCCGTCATCCCTTGTACAGCCAACCTTCCTGGTCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_212112	ILMN_212112	LRRC45	NM_153545.1	NM_153545.1		217366	23956319	NM_153545.1	Lrrc45	NP_705773.1	ILMN_1214991	007050113	S	2126	AATGAAGGGAAGCGGGAGAACCGAAGCGCCCAGCGAGGGTAGAAATGCTG	11	+	120582124-120582128:120582129-120582173	11qE2	Mus musculus leucine rich repeat containing 45 (Lrrc45), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC30595; BC023296	MGC30595; BC023296
Mus musculus	RefSeq	ILMN_197739	ILMN_197739	LOC239341	XM_139339.2	XM_139339.2			38077727	XM_139339.2	LOC239341		ILMN_2529197	007610537	S	515	GGAAGGGGACCTTTCAGCACGTGGGCAAAGCCATCAATCAAGGCAAGATC										
Mus musculus	RefSeq	ILMN_211735	ILMN_211735	COQ6	NM_172582.2	NM_172582.2		217707	142347915	NM_172582.2	Coq6	NP_766170.1	ILMN_1229589	000460349	S	45	TTCGCTGGTGGAGTTCCGCGCAGCTCGCAGCCAGAGGAGGCCCGCTAGTT	12	+	85703041-85703090	12qD1	Mus musculus coenzyme Q6 homolog (yeast) (Coq6), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]; The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor [goid 16709] [evidence IEA]	AW742344; 5930427M12Rik	AW742344; 5930427M12Rik
Mus musculus	RefSeq	ILMN_211735	ILMN_211735	COQ6	NM_172582.2	NM_172582.2		217707	142347915	NM_172582.2	Coq6	NP_766170.1	ILMN_2766720	007050372	S	1417	GGCCTTTGCGAGCAAATGAGTGCTTCTCTTCTGGAGACCGTGATGACAAA	12	+	85714640-85714658:85714659-85714689	12qD1	Mus musculus coenzyme Q6 homolog (yeast) (Coq6), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]; The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor [goid 16709] [evidence IEA]	AW742344; 5930427M12Rik	AW742344; 5930427M12Rik
Mus musculus	RefSeq	ILMN_220647	ILMN_220647	TTC27	NM_152817.3	NM_152817.3		74196	141802682	NM_152817.3	Ttc27	NP_690030.2	ILMN_1238733	003130433	S	2738	GCTTTCTCCAATTCCTCCAGTACCTGTATTTCTGAAACACAAGATACCCG	17	+	75262828-75262877	17qE2	Mus musculus tetratricopeptide repeat domain 27 (Ttc27), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2610511O17Rik	2610511O17Rik
Mus musculus	RefSeq	ILMN_223693	ILMN_223693	CNOT8	NM_026949.3	NM_026949.3		69125	118130316	NM_026949.3	Cnot8	NP_081225.1	ILMN_1235663	000450288	S	1819	AGAAAGAAAGGACAATTGTAAGAAGTAAAAACTTATTTGGAAGGCAGAGA	11	+	57931880-57931929	11qB1.3	Mus musculus CCR4-NOT transcription complex, subunit 8 (Cnot8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1500015I04Rik; AU015770; AU043059; AA536816; 1810022F04Rik	1500015I04Rik; AU015770; AU043059; AA536816; 1810022F04Rik
Mus musculus	RefSeq	ILMN_239409	ILMN_239409	ZNHIT3	NM_001005223.1	NM_001005223.1		448850	52421331	NM_001005223.1	Znhit3	NP_001005223.1	ILMN_2914957	001660369	S	537	CACCATACGCAGCATGCACACGTGGGTCTTCCTCTACCACATGGCTCGCT	11	-	84727546-84727595	11qC	Mus musculus zinc finger, HIT type 3 (Znhit3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Myohd1; Trip3; MGC107312	Myohd1; Trip3; MGC107312
Mus musculus	RefSeq	ILMN_221943	ILMN_318328	LOC100044204	XM_001471696.1	XM_001471696.1		100044204	149251615	XM_001471696.1	LOC100044204	XP_001471746.1	ILMN_2742426	003830048	S	1273	GCAAGCGTCTTTACGCCACTACATCACTATACAGCGCCTGGGACAAGCAG					PREDICTED: Mus musculus hypothetical protein LOC100044204 (LOC100044204), mRNA.					
Mus musculus	RefSeq	ILMN_220817	ILMN_318328	LOC100044204	XM_001471696.1	XM_001471696.1		100044204	149251615	XM_001471696.1	LOC100044204	XP_001471746.1	ILMN_2727309	004200059	S	1157	AGGAGGCTCTGTGCAAGTGCTGGAGGACCAAGAGTTAACCTGTCAGCCGG					PREDICTED: Mus musculus hypothetical protein LOC100044204 (LOC100044204), mRNA.					
Mus musculus	RefSeq	ILMN_194873	ILMN_231667	SNX12	NM_018875.1	NM_018875.1		55988	9256639	NM_018875.1	Snx12	NP_061363.1	ILMN_2708440	002850494	S	228	GGACAAACCTACCCATCTTCAAGCTGAAAGAATCCTGTGTACGGCGACGC	X	-	98410869-98410917:98417601-98417601	XqC3	Mus musculus sorting nexin 12 (Snx12), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW045757; SDP8; 2610001F05Rik	AW045757; SDP8; 2610001F05Rik
Mus musculus	RefSeq	ILMN_212219	ILMN_222016	POLR2D	NM_027002.3	NM_027002.3		69241	146141112	NM_027002.3	Polr2d	NP_081278.1	ILMN_2624135	003840753	S	290	CATAAGTTTGAGTTGGCCTGTTTAGCCAATCTTTGCCCGGAGACTGCTGA				18qB1	Mus musculus polymerase (RNA) II (DNA directed) polypeptide D (Polr2d), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	2310002G05Rik; RBP4; HSRBP4; 2610028L19Rik	2310002G05Rik; RBP4; HSRBP4; 2610028L19Rik
Mus musculus	RefSeq	ILMN_222016	ILMN_222016	POLR2D	NM_027002.3	NM_027002.3		69241	146141112	NM_027002.3	Polr2d	NP_081278.1	ILMN_2743494	004390551	S	202	AACCCTCAACTACACGGCCCGCTTCAGCCGGTTCAAAAACAGAGAGACCA				18qB1	Mus musculus polymerase (RNA) II (DNA directed) polypeptide D (Polr2d), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	2310002G05Rik; RBP4; HSRBP4; 2610028L19Rik	2310002G05Rik; RBP4; HSRBP4; 2610028L19Rik
Mus musculus	RefSeq	ILMN_212219	ILMN_222016	POLR2D	NM_027002.3	NM_027002.3		69241	146141112	NM_027002.3	Polr2d	NP_081278.1	ILMN_2690306	000110280	S	439	CTGATCCGCAGACGTCACTCTGCTCCTTGAGTTACAGCACCACGGTCTGA				18qB1	Mus musculus polymerase (RNA) II (DNA directed) polypeptide D (Polr2d), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	2310002G05Rik; RBP4; HSRBP4; 2610028L19Rik	2310002G05Rik; RBP4; HSRBP4; 2610028L19Rik
Mus musculus	RefSeq	ILMN_208818	ILMN_208818	PLAGL2	NM_018807.5	NM_018807.5		54711	118130736	NM_018807.5	Plagl2	NP_061277.2	ILMN_1243885	007400369	S	5107	CTACTTCACACCTCCCCCACTGCCAGTTGGTTGATGCTCTAGAGCCACTC	2	-	153053755-153053804	2qH1	Mus musculus pleiomorphic adenoma gene-like 2 (Plagl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU018672; mKIAA0198; AW552839	AU018672; mKIAA0198; AW552839
Mus musculus	Riken	ILMN_202585	ILMN_202585	FBXO6A	ri|3010034A12|ZX00083P24|AK019407|1399					AK019407	Fbxo6a		ILMN_2550725	001030372	S	1330	GCAGAGCGCCTGCCTAGCATGTGCTGGCTCAACTCCGTATCACAGAGAAA										
Mus musculus	RefSeq	ILMN_219019	ILMN_219019	OLFR381	NM_147022.2	NM_147022.2		259024	121583634	NM_147022.2	Olfr381	NP_667233.2	ILMN_2929813	005130561	S	602	TCTTAGGAGGGCCCCTTACTGTCATCCCATTCTTACTCATTGTTGTGTCC	11	-	73299673-73299722	11qB4	Mus musculus olfactory receptor 381 (Olfr381), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-103M20.1; MOR135-4	RP23-103M20.1; MOR135-4
Mus musculus	RefSeq	ILMN_223010	ILMN_223010	OLFR429	NM_146722.1	NM_146722.1		258717	22129396	NM_146722.1	Olfr429	NP_666933.1	ILMN_2758085	003850348	S	558	TTTGGCTTGTACTGACACATCAGTCAATGTCCTAGTAGATTTTATTATAA	1	+	176019730-176019779	1qH3	Mus musculus olfactory receptor 429 (Olfr429), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR105-1; MGC157526	MOR105-1; MGC157526
Mus musculus	RefSeq	ILMN_212521	ILMN_323460	LOC100047816	XM_001478921.1	XM_001478921.1		100047816	149269122	XM_001478921.1	LOC100047816	XP_001478971.1	ILMN_2696488	007550110	S	975	CAGTGGGCAACTCAGACTGTGCCTATGACCGGATTGTAGTGAGTGGCGCC					PREDICTED: Mus musculus similar to Dnase1l2 protein (LOC100047816), mRNA.					
Mus musculus	RefSeq	ILMN_187345	ILMN_323460	LOC100047816	XM_001478921.1	XM_001478921.1		100047816	149269122	XM_001478921.1	LOC100047816	XP_001478971.1	ILMN_2443308	006130452	S	354	CAAACTGCTGTCAGCGGGGCCCAGGGCCAACCCATGACAAAAGCAGAAAA					PREDICTED: Mus musculus similar to Dnase1l2 protein (LOC100047816), mRNA.					
Mus musculus	RefSeq	ILMN_212521	ILMN_323460	LOC100047816	XM_001478921.1	XM_001478921.1		100047816	149269122	XM_001478921.1	LOC100047816	XP_001478971.1	ILMN_2627406	001230044	S	306	TTTCTGCTTTTGTCATGGGTTGGCCCTGGGCCCCGCTGACAGCAGTTTGG					PREDICTED: Mus musculus similar to Dnase1l2 protein (LOC100047816), mRNA.					
Mus musculus	RefSeq	ILMN_199813	ILMN_199813	LOC383049	XM_356823.1	XM_356823.1			38077548	XM_356823.1	LOC383049		ILMN_2536578	002900386	S	2239	CCTCGGCACGCAAGGCACATGAAGAATGCCAACCAGCAAGCTCTTACCAG										
Mus musculus	RefSeq	ILMN_201646	ILMN_245194	D2BWG1335E	NM_026828.2	NM_026828.2		52838	142370449	NM_026828.2	D2Bwg1335e	NP_081104.1	ILMN_2543456	003310338	S	517	TACGCCGAGTGTCTGGTGACGGTGCCCTGGAACTGATTCTGGAGGCTGCT	2	-	26205990-26206039	2qA3	Mus musculus DNA segment, Chr 2, Brigham & Women's Genetics 1335 expressed (D2Bwg1335e), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1110034G11Rik	1110034G11Rik
Mus musculus	RefSeq	ILMN_193481	ILMN_193481	WDR40B	NM_178739.4	NM_178739.4		245404	141802765	NM_178739.4	Wdr40b	NP_848854.2	ILMN_2497615	007330286	S	2597	GTTGCTATTTTTAATACCAAATGTTATATTTGAGCATATTTTAAACTTTC	X	-	42140563-42140612	XqA4	Mus musculus WD repeat domain 40B (Wdr40b), mRNA.				A230038L21Rik; 9330180J20	A230038L21Rik; 9330180J20
Mus musculus	RefSeq	ILMN_198928	ILMN_255859	TMPRSS13	NM_001013373.2	NM_001013373.2		214531	111185929	NM_001013373.2	Tmprss13	NP_001013391.2	ILMN_1226348	001300220	S	3048	GTCTCGGAGGCAAGTTCAAGGAGATCAGACCAGCTCAGGACAGCTCAGGC	9	+	45155467-45155516	9qA5.2	Mus musculus transmembrane protease, serine 13 (Tmprss13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	Tpmrss13; BC010843; MGC103261	Tpmrss13; BC010843; MGC103261
Mus musculus	RefSeq	ILMN_255859	ILMN_255859	TMPRSS13	NM_001013373.2	NM_001013373.2		214531	111185929	NM_001013373.2	Tmprss13	NP_001013391.2	ILMN_2911788	002060364	S	2982	ACCTGTTGTTACTCAGCTCCACTCTCTTCAGCCTTCCTTGGGCCTACCAG	9	+	45155401-45155450	9qA5.2	Mus musculus transmembrane protease, serine 13 (Tmprss13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	Tpmrss13; BC010843; MGC103261	Tpmrss13; BC010843; MGC103261
Mus musculus	Riken	ILMN_203661	ILMN_203661	9430084D13RIK	ri|9430084D13|PX00110F22|AK035076|2397					AK035076	9430084D13Rik		ILMN_1245341	004490021	S	2334	AAAGGGGGGTGGGGCAGGCTGGAGAGATAGTTTGGTGGTTAAGAACATGC										
Mus musculus	RefSeq	ILMN_196530	ILMN_228222	LOC636530	XM_911961.2	XM_911961.2		636530	94384297	XM_911961.2	LOC636530	XP_917054.1	ILMN_2703765	003890438	S	1195	AAGGCGCTAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTG					PREDICTED: Mus musculus similar to plasma kallikrein-like protein 4 (LOC636530), mRNA.					
Mus musculus	RefSeq	ILMN_216861	ILMN_216861	PRL5A1	NM_023746.4	NM_023746.4		28078	142367178	NM_023746.4	Prl5a1	NP_076235.1	ILMN_2676207	000610300	S	511	GACAAATCAAAAAACTCACTAAAAATCTGCAGAACATTAAGACTATACTC	13	+	28241836-28241885	13qA3.1	Mus musculus prolactin family 5, subfamily a, member 1 (Prl5a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	PLP-L; Prlpl; RP23-231P12.2; D13Wsu14e; 1600013P04Rik	PLP-L; Prlpl; RP23-231P12.2; D13Wsu14e; 1600013P04Rik
Mus musculus	RefSeq	ILMN_222828	ILMN_222828	OLFR825	NM_146677.1	NM_146677.1		258672	33239097	NM_146677.1	Olfr825	NP_666888.1	ILMN_2755414	003850053	S	574	TGTTCTGACATTTTCATACACAAAATAGTATCTTTTTCTTTATCTGGCAT	10	-	129599757-129599806	10qD3	Mus musculus olfactory receptor 825 (Olfr825), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR210-1	MOR210-1
Mus musculus	RefSeq	ILMN_220278	ILMN_220278	BC023882	NM_146159.1	NM_146159.1		231123	22122692	NM_146159.1	BC023882	NP_666271.1	ILMN_2720058	006590035	S	1789	CTACATCATCTCCTTACTGATATTCTTGCTGATGTGAAGACGAAAAGAAG	5	-	34496660-34496709	5qB2	Mus musculus cDNA sequence BC023882 (BC023882), mRNA.				D5H4S43; MGC38108; MGC36997; D4S43h; D5H4S43E; MGC38583	D5H4S43; MGC38108; MGC36997; D4S43h; D5H4S43E; MGC38583
Mus musculus	RefSeq	ILMN_186523	ILMN_237043	ZFP346	NM_012017.2	NM_012017.2		26919	119672927	NM_012017.2	Zfp346	NP_036147.1	ILMN_2496664	006510369	S	766	GTAAAATAGTGCTGAACTCCATAGAGCAGTACCAAGCTCACGTCAGTGGC	13	+	55231922-55231971	13qB1	Mus musculus zinc finger protein 346 (Zfp346), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]	Jaz	Jaz
Mus musculus	RefSeq	ILMN_186523	ILMN_237043	ZFP346	NM_012017.2	NM_012017.2		26919	119672927	NM_012017.2	Zfp346	NP_036147.1	ILMN_1253077	003420241	S	3273	GTCACAACCTAGCTTTGTACTGTTGAAATCGTATTGTTTCCCTTTGAGGT	13	+	55236108-55236157	13qB1	Mus musculus zinc finger protein 346 (Zfp346), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]	Jaz	Jaz
Mus musculus	RefSeq	ILMN_201026	ILMN_201026	LOC382321	XM_358726.1	XM_358726.1			38088006	XM_358726.1	LOC382321		ILMN_1216863	000070075	S	615	GGGGTCTACCCAAAATAATCAGACAGAAGTAGGATTTTCTCCAACTGCCC										
Mus musculus	MEEBO	ILMN_188466	ILMN_188466	IMPA2	scl51828.10_167				16716594	NM_053261	Impa2		ILMN_1244086	002340358	S	3	CCAACATTCTCCAAACAGCTACAGTGCGGTGTCCTGTACAAATTCTCCCC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: myo-inositol 1-phosphate + H2O = myo-inositol + phosphate [goid 8934] [evidence ISA]		
Mus musculus	MEEBO	ILMN_184698	ILMN_184698	1700012F11RIK	scl069332.2_320						1700012F11Rik		ILMN_2420805	006110762	S	4	CTCCATTACCACCTACAACATTGTGGGGCTGGAAGTGAAACCATGAACTG										
Mus musculus	RefSeq	ILMN_198121	ILMN_252687	LOC245576	XR_003498.1	XR_003498.1		245576	94409261	XR_003498.1	LOC245576		ILMN_1216989	006280730	S	768	GCCCCCAATCACAGTTGTTGGTGATGTCCGAGGAAGTATTGCCGCCGCCA				XqE2	PREDICTED: Mus musculus similar to phosphoribosyl pyrophosphate synthetase-associated protein 2 (LOC245576), mRNA.					
Mus musculus	MEEBO	ILMN_193276	ILMN_193276	SCL0001333.1_125	scl0001333.1_125						scl0001333.1_125		ILMN_2495688	002230382	S	15	ACGTCTCTTCTGTCACACCCCGAAATGGCAGTCCTGGAACAAAGCAGATG										
Mus musculus	MEEBO	ILMN_218602	ILMN_218602	4432412L15RIK	scl33596.6.1_111				51764238	XM_486140	4432412L15Rik		ILMN_2697892	007050068	S	657	TAGGGGTGTCGAGTGTCACTAAGGCCAAAGGAGATGGTGCAGTGGAGGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218823	ILMN_218823	KCTD3	NM_172650.2	NM_172650.2		226823	46255027	NM_172650.2	Kctd3	NP_766238.1	ILMN_1224318	002490594	S	3628	AAGTTTACTATGTTGCCAGTGGTTTCACACAAATTCCCTTGTATTTATTT	1	-	190795002-190795051	1qH6	Mus musculus potassium channel tetramerisation domain containing 3 (Kctd3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	4930438A20Rik; E330032J19Rik; NY-REN-45; 9330185B06	4930438A20Rik; E330032J19Rik; NY-REN-45; 9330185B06
Mus musculus	RefSeq	ILMN_198230	ILMN_198230	LOC209742	XM_139939.2	XM_139939.2			38083029	XM_139939.2	LOC209742		ILMN_2530943	006760086	S	132	GTGGCTTGATTTTCAAGGTGAACCACAGCCCTTCCAGACGCTGCTGCCGG										
Mus musculus	RefSeq	ILMN_211953	ILMN_211953	CSN2	NM_009972.1	NM_009972.1		12991	6753537	NM_009972.1	Csn2	NP_034102.1	ILMN_2621101	000450376	S	681	TGCAGTACCTAGAACTTCTTAACCCCACCGTCCAATTCCCTGCCACTCCA	5	-	88123516-88123565	5qE1	Mus musculus casein beta (Csn2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Csnb	Csnb
Mus musculus	RefSeq	ILMN_216178	ILMN_234838	AMY2-2	NM_001042711.2	NM_001042711.2		109959	142356897	NM_001042711.2	Amy2-2	NP_001036176.1	ILMN_2668124	005050438	S	1365	GCCACTTTACAGACTGGTCTTCCTGCTGGCACATACTGTGATGTCATCTC	3	-	113052258-113052307	3qF3	Mus musculus amylase 2-2, pancreatic (Amy2-2), mRNA.					
Mus musculus	RefSeq	ILMN_244102	ILMN_244102	D8ERTD738E	NM_001007571.1	NM_001007571.1		101966	56090601	NM_001007571.1	D8Ertd738e	NP_001007572.1	ILMN_2820559	003870370	S	253	GAAATCAGAAGCCACCATCCCTGGCAAGACACCATCCTGAAGGCACTGGG	8	-	86770441-86770451:86770452-86770490	8qC3	Mus musculus DNA segment, Chr 8, ERATO Doi 738, expressed (D8Ertd738e), mRNA.				MGC18818; AA589584	MGC18818; AA589584
Mus musculus	RefSeq	ILMN_232840	ILMN_232840	NGEF	NM_019867.1	NM_019867.1		53972	9845276	NM_019867.1	Ngef	NP_063920.1	ILMN_2822905	002120402	S	2403	TGTTAAGAGTCTACCAGGCACACAGATGGCCGCCCCTGCCCGAGGGAGTT	1	-	89373686-89373735	1qD	Mus musculus neuronal guanine nucleotide exchange factor (Ngef), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	Tims2; ephexin	Tims2; ephexin
Mus musculus	RefSeq	ILMN_200239	ILMN_200239	LOC386045	XM_359042.1	XM_359042.1			38081045	XM_359042.1	LOC386045		ILMN_1233486	002360025	S	41	TCATTCCCACCCATTCCTTAAAATACGAATCTCTTAAGGGGATTGACCCC										
Mus musculus	MEEBO	ILMN_191376	ILMN_191376	TRBV26_K02548_T_CELL_RECEPTOR_BETA_VARIABLE_26_71	TRBV26_K02548_T_cell_receptor_beta_variable_26_71						TRBV26_K02548_T_cell_receptor_beta_variable_26_71		ILMN_1220718	007200192	S	1	CCCTGAAAAGGGACATCCAGTTGTATTCTGGTATCAACAAAATAAGAACA										
Mus musculus	MEEBO	ILMN_220426	ILMN_220426	SFRS16	scl31678.22.1_32				23308725	NM_016680	Sfrs16		ILMN_2753675	002940653	S	1894	CTGCCTCCCATGGGACTCCAGCTGGCCCCCAAGTCCCAGACTCTTGACTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]			
Mus musculus	MEEBO	ILMN_220426	ILMN_220426	SFRS16	scl31678.22.1_32				23308725	NM_016680	Sfrs16		ILMN_1249654	004260307	S	2306	ACAGACATTAGGCAGAAAACGGAGTTGGGGCTGTTATGCTGCTGGGTTTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]			
Mus musculus	RefSeq	ILMN_189211	ILMN_261334	ARSK	NM_029847.4	NM_029847.4		77041	148277047	NM_029847.4	Arsk	NP_084123.2	ILMN_2699894	000160551	S	3127	TTTGATATTGACCTGGAGGAAATGTGTATTTTCTTAATTATAAATCTTTG				13qC1	Mus musculus arylsulfatase K (Arsk), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4833414G15Rik; 2810429K17Rik	4833414G15Rik; 2810429K17Rik
Mus musculus	RefSeq	ILMN_198013	ILMN_261536	EG665802	XM_981847.1	XM_981847.1		665802	94374914	XM_981847.1	EG665802	XP_986941.1	ILMN_1231041	004220291	S	197	GATGAGGCTTTGGCCATATCCCCTCTGGGGAACGTGCCAGCTGTGTACGT	5	+	94281185-94281234	5qE3	PREDICTED: Mus musculus predicted gene, EG665802, transcript variant 5 (EG665802), mRNA.					
Mus musculus	MEEBO	ILMN_187628	ILMN_187628	SCL000361.1_1	scl000361.1_1	X98059.1			1370217	X98059.1	scl000361.1_1		ILMN_2445749	002600341	S	4	GCATCTTCTGGCAGCTGGCAACTCATCTTTGGATCTGGAACCCAACTGAC										
Mus musculus	RefSeq	ILMN_220451	ILMN_220451	RDH9	NM_153133.2	NM_153133.2		103142	118130113	NM_153133.2	Rdh9	NP_694773.1	ILMN_1254902	003460358	S	2347	GTACCTGTATGGTACATGTGTGGGAGAGCCTTCAGAGATGGGAAGGTGTG	10	+	127229402-127229451	10qD3	Mus musculus retinol dehydrogenase 9 (Rdh9), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Crad3; AI121090	Crad3; AI121090
Mus musculus	RefSeq	ILMN_220530	ILMN_220530	SMTNL2	NM_177776.3	NM_177776.3		276829	118130489	NM_177776.3	Smtnl2	NP_808444.1	ILMN_2723293	006520056	S	2047	GTTCTTGGGAAGAAACAGCTTAGTCAGCCCCAGGTCCTATCTTCCTATCA	11	-	72204143-72204192	11qB4	Mus musculus smoothelin-like 2 (Smtnl2), mRNA.				MGC47155; RP23-48A2.1; D130058I21Rik	MGC47155; RP23-48A2.1; D130058I21Rik
Mus musculus	RefSeq	ILMN_219027	ILMN_219027	2810004N23RIK	NM_025615.1	NM_025615.1		66523	13385069	NM_025615.1	2810004N23Rik	NP_079891.1	ILMN_2994063	002480192	S	844	CTCTTCCAGGGTAGCTAAATGAAGTCCCTGTCAGCTCCAGAGAGGAGCAG	8	-	127363705-127363733:127363734-127363754	8qE2	Mus musculus RIKEN cDNA 2810004N23 gene (2810004N23Rik), mRNA.				Ayu21-55; Gt(pU21)55Imeg; 3110004G14Rik; GtAyu21-55	Ayu21-55; Gt(pU21)55Imeg; 3110004G14Rik; GtAyu21-55
Mus musculus	RefSeq	ILMN_219027	ILMN_219027	2810004N23RIK	NM_025615.1	NM_025615.1		66523	13385069	NM_025615.1	2810004N23Rik	NP_079891.1	ILMN_2703302	004010204	S	610	CTACAAGGTTTTGCAGAAACAAATCAAAGAGAAGAAGATCGCAGTGGAAG	8	-	127365207-127365256	8qE2	Mus musculus RIKEN cDNA 2810004N23 gene (2810004N23Rik), mRNA.				Ayu21-55; Gt(pU21)55Imeg; 3110004G14Rik; GtAyu21-55	Ayu21-55; Gt(pU21)55Imeg; 3110004G14Rik; GtAyu21-55
Mus musculus	MEEBO	ILMN_195823	ILMN_195823	2310001H18RIK	scl12599.1.1_52						2310001H18Rik		ILMN_1250154	001980450	S	1	CTGCTGACCTGGATCCGGAGGCGGAGACAAGGAATTTCAGAGAAAAAAAG										
Mus musculus	Riken	ILMN_204853	ILMN_204853	A130071D18RIK	ri|A130071D18|PX00124D09|AK038009|2173					AK038009	A130071D18Rik		ILMN_1228918	000770470	S	1943	CCCTGGAAACCTCAGAATTGAGACGGACAGGAGTGAAGTCGTTCCCATGG										
Mus musculus	Riken	ILMN_203050	ILMN_203050	A930007K04RIK	ri|A930007K04|PX00065B21|AK044324|1984					AK044324	A930007K04Rik		ILMN_1253939	002370377	S	1639	CGAGCAGAAGTAGCAATTCAACTTTCCCTCAGGACTGGAGAGTGAAGGCC										
Mus musculus	RefSeq	ILMN_210093	ILMN_210093	EIF2B5	NM_172265.1	NM_172265.1		224045	26986556	NM_172265.1	Eif2b5	NP_758469.1	ILMN_2715215	000450521	S	1888	GGAGTTCCCCCTGCAACAAGTCGATGGCCTGCTTGACCCAAACCGCTACT	16	+	20507149-20507198	16qA3	Mus musculus eukaryotic translation initiation factor 2B, subunit 5 epsilon (Eif2b5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]	C81315	C81315
Mus musculus	RefSeq	ILMN_210093	ILMN_210093	EIF2B5	NM_172265.1	NM_172265.1		224045	26986556	NM_172265.1	Eif2b5	NP_758469.1	ILMN_2602140	001450468	S	2260	GCCAGATCCGTGCATCTCATTGGCTGTCCTCGTAACAAGAGAGCTGACAG	16	+	20509113-20509162	16qA3	Mus musculus eukaryotic translation initiation factor 2B, subunit 5 epsilon (Eif2b5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]	C81315	C81315
Mus musculus	RefSeq	ILMN_210093	ILMN_210093	EIF2B5	NM_172265.1	NM_172265.1		224045	26986556	NM_172265.1	Eif2b5	NP_758469.1	ILMN_2930067	002370187	S	2258	CTGCCAGATCCGTGCATCTCATTGGCTGTCCTCGTAACAAGAGAGCTGAC	16	+	20509111-20509160	16qA3	Mus musculus eukaryotic translation initiation factor 2B, subunit 5 epsilon (Eif2b5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]	C81315	C81315
Mus musculus	RefSeq	ILMN_194171	ILMN_254638	MMP19	NM_021412.1	NM_021412.1		58223	10946771	NM_021412.1	Mmp19	NP_067387.1	ILMN_2595908	001050315	S	1805	AAGTGTGACATCTAGTCTCTGGTGGAGGGAAACTGTCAATCAGGAGGGGG	10	+	128236295-128236344	10qD3	Mus musculus matrix metallopeptidase 19 (Mmp19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC123370	MGC123370
Mus musculus	Riken	ILMN_202107	ILMN_202107	2810049C16RIK	ri|2810049C16|ZX00065P01|AK012928|961					AK012928	2810049C16Rik		ILMN_2547052	001660102	S	655	CTAGCCAACGCGCTCCCGGTGTGACAGTCCCAGTCTCGAGGAAGAGGAAA										
Mus musculus	RefSeq	ILMN_200216	ILMN_200216	LOC385963	XM_359016.1	XM_359016.1			38080969	XM_359016.1	LOC385963		ILMN_2537978	006330215	S	425	GAGAAGAGTTGGCGGTAAATGGAGGAGAAATGGGAGGCACTGGCATCACC										
Mus musculus	RefSeq	ILMN_210097	ILMN_210097	SEPT9	NM_017380.1	NM_017380.1		53860	8393783	NM_017380.1	Sept9	NP_059076.1	ILMN_2602185	000730458	S	2646	ATCAGGACTTTGAAGGAAATCTCCAGCACGCTGGACCCAGGGCACTCCGG	11	+	117223344-117223393	11qE2	Mus musculus septin 9 (Sept9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Sint1; Msf; MSF1; PNUTL4	Sint1; Msf; MSF1; PNUTL4
Mus musculus	Riken	ILMN_204770	ILMN_204770	B930059J09RIK	ri|B930059J09|PX00164P14|AK047419|2089					AK047419	B930059J09Rik		ILMN_1249977	004390152	S	1606	GGGTCCTGGGCACCTAGACATGCATACTTTAAGACATCAGCTCCTAGGCC										
Mus musculus	RefSeq	ILMN_199748	ILMN_199748	LOC386508	XM_359357.1	XM_359357.1			38076787	XM_359357.1	LOC386508		ILMN_1254916	007210519	S	1	ATGGCTGCAGCAACCAGCATGGCCCAGAAGGTAACACAGACTCAGACTTC										
Mus musculus	RefSeq	ILMN_208923	ILMN_208923	STMN4	NM_019675.2	NM_019675.2		56471	31981038	NM_019675.2	Stmn4	NP_062649.1	ILMN_2590845	003180746	S	544	GAAGCTGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGGAGGCCCATC	14	+	66976792-66976841	14qD1	Mus musculus stathmin-like 4 (Stmn4), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		R75359; RB3; Lagl	R75359; RB3; Lagl
Mus musculus	RefSeq	ILMN_208923	ILMN_208923	STMN4	NM_019675.2	NM_019675.2		56471	31981038	NM_019675.2	Stmn4	NP_062649.1	ILMN_2590848	007040025	S	550	TGGCCCAGAAGATGGAGTCCAATAAGGAGAACCGGGAGGCCCATCTGGCT	14	+	66976798-66976847	14qD1	Mus musculus stathmin-like 4 (Stmn4), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		R75359; RB3; Lagl	R75359; RB3; Lagl
Mus musculus	MEEBO	ILMN_195433	ILMN_195433	SCL000648.1_30	scl000648.1_30						scl000648.1_30		ILMN_2515536	003390445	S	4	CAAGAAAAGATTGGGGCGGTAAAGAGGTAGAGTCCGTCTTGCTCATCGGA										
Mus musculus	RefSeq	ILMN_221626	ILMN_221626	ADIPOQ	NM_009605.4	NM_009605.4		11450	87252710	NM_009605.4	Adipoq	NP_033735.3	ILMN_2738082	004810450	S	857	GACTGCAACTACCCATAGCCCATACACCAGGAGAATCATGGAACAGTCGA	16	+	23157666-23157667:23157668-23157715	16qB1	Mus musculus adiponectin, C1Q and collagen domain containing (Adipoq), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; The removal of one or more electrons from a fatty acid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen [goid 19395] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of gluconeogenesis [goid 45721] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 45923] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46326] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction [goid 9967] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence TAS]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IDA]	adipo; Acrp30; GBP28; Acdc; apM1; 30kDa	adipo; Acrp30; GBP28; Acdc; apM1; 30kDa
Mus musculus	Riken	ILMN_201917	ILMN_201917	4933429E06RIK	ri|4933429E06|PX00021J23|AK016980|1518					AK016980	4933429E06Rik		ILMN_1252814	005960598	S	1251	CGTGAGCTAAGTGTGGTGGTTGGTACACATGAGGAAGCAGAGGCAAGTGG										
Mus musculus	RefSeq	ILMN_219152	ILMN_219152	SLC5A4A	NM_133184.2	NM_133184.2		64452	120444905	NM_133184.2	Slc5a4a	NP_573447.2	ILMN_2974664	006510398	S	1936	TAGAGGAGGAAGCTCTGACAGACACAACAGAGAAGCCCTTCTGGCGGACG	10	+	75629511-75629560	10qC1	Mus musculus solute carrier family 5, member 4a (Slc5a4a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	SGLT3-a	SGLT3-a
Mus musculus	RefSeq	ILMN_215228	ILMN_215228	DUSP10	NM_022019.4	NM_022019.4		63953	146134934	NM_022019.4	Dusp10	NP_071302.2	ILMN_2678724	002000494	S	2227	GTGTGTTCTATGCTCCGGATATCTTTTCCCCTTCTGTGGGTCTGAGAGAA				1qH5	Mus musculus dual specificity phosphatase 10 (Dusp10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	2610306G15Rik; MKP-5; AI158871	2610306G15Rik; MKP-5; AI158871
Mus musculus	MEEBO	ILMN_187913	ILMN_187913	AV344025	scl49565.1.1_305				31341930	NM_178927	AV344025		ILMN_1218475	004640601	S	2466	CGTGTGGACTCAAAGGTCTACCAATGGTTGCACAGAAAGTTAACAGGCTG										
Mus musculus	MEEBO	ILMN_195508	ILMN_195508	SCL0001118.1_0	scl0001118.1_0	AK002910.1			12833241	AK002910.1	scl0001118.1_0		ILMN_2516205	003420041	S	10	CTCGGGAGTGGCTGAACCGAAGCGCGCAGGCGGGAGACTCTGCAGGATCC										
Mus musculus	RefSeq	ILMN_242951	ILMN_242951	OLFR312	NM_001011819.1	NM_001011819.1		258065	58801401	NM_001011819.1	Olfr312	NP_001011819.1	ILMN_3161363	000840647	S	582	GGAGGTGGGCTTTGCTGTCAGTAGTTGCATTGTCATGAGCTCATTCGTCC	11	+	58645239-58645288	11qB1.3	Mus musculus olfactory receptor 312 (Olfr312), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC129181; MGC129174; MOR222-4P	MGC129181; MGC129174; MOR222-4P
Mus musculus	RefSeq	ILMN_209876	ILMN_209876	SLC25A11	NM_024211.2	NM_024211.2		67863	31980956	NM_024211.2	Slc25a11	NP_077173.1	ILMN_2600053	006560576	S	284	GAGTGGTGAAGGGGCCAAGACTCGAGAGTACAAAACCAGTTTCCATGCCC	11	-	70459623-70459672	11qB3	Mus musculus solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11 (Slc25a11), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2oxoc; 2310022P18Rik	2oxoc; 2310022P18Rik
Mus musculus	RefSeq	ILMN_209876	ILMN_209876	SLC25A11	NM_024211.2	NM_024211.2		67863	31980956	NM_024211.2	Slc25a11	NP_077173.1	ILMN_3010109	005960050	S	1388	CTCTCTGGGGAATCCAAGGCAGAGCTGAGGAGACAGGAGAAAGCAGAAGC	11	-	70457906-70457955	11qB3	Mus musculus solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11 (Slc25a11), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2oxoc; 2310022P18Rik	2oxoc; 2310022P18Rik
Mus musculus	RefSeq	ILMN_209876	ILMN_209876	SLC25A11	NM_024211.2	NM_024211.2		67863	31980956	NM_024211.2	Slc25a11	NP_077173.1	ILMN_3010110	007400521	S	1291	GCCCCTGGCTCTTCCTGAGGAGACCTAAGACACACACCAAGGATTTCTAG	11	-	70458003-70458052	11qB3	Mus musculus solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11 (Slc25a11), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2oxoc; 2310022P18Rik	2oxoc; 2310022P18Rik
Mus musculus	RefSeq	ILMN_201465	ILMN_201465	LOC385217	XM_358125.1	XM_358125.1			38094015	XM_358125.1	LOC385217		ILMN_1232935	000160543	S	260	GCACCACATTAGAACTCTGTGACACCACGTGGAGCAGTGTGACCCCACAG										
Mus musculus	RefSeq	ILMN_236440	ILMN_236440	COPG	NM_201244.1	NM_201244.1		54161	47059162	NM_201244.1	Copg	NP_957696.1	ILMN_3074952	007650026	I	779	GCATTTGGGAGAAACAGGAGGATGGCTGCCAGTTTGAACCTGCCTGGGCT	6	+	87840655-87840704	6qD1	Mus musculus coatomer protein complex, subunit gamma (Copg), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC66965; AU019265; BC056168; D6Wsu16e; Copg1; D6Ertd71e	MGC66965; AU019265; BC056168; D6Wsu16e; Copg1; D6Ertd71e
Mus musculus	RefSeq	ILMN_200661	ILMN_236440	COPG	NM_201244.1	NM_201244.1		54161	47059162	NM_201244.1	Copg	NP_957696.1	ILMN_1233848	006560056	S	775	CCCAGCATTTGGGAGAAACAGGAGGATGGCTGCCAGTTTGAACCTGCCTG	6	+	87840651-87840700	6qD1	Mus musculus coatomer protein complex, subunit gamma (Copg), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC66965; AU019265; BC056168; D6Wsu16e; Copg1; D6Ertd71e	MGC66965; AU019265; BC056168; D6Wsu16e; Copg1; D6Ertd71e
Mus musculus	RefSeq	ILMN_236440	ILMN_236440	COPG	NM_201244.1	NM_201244.1		54161	47059162	NM_201244.1	Copg	NP_957696.1	ILMN_3154007	001050382	A	277	TGCCATGACCAAGCTCTTCCAGTCCAATGATCCCACACTCCGCCGCATGT	6	+	87839991-87840021:87840184-87840202	6qD1	Mus musculus coatomer protein complex, subunit gamma (Copg), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC66965; AU019265; BC056168; D6Wsu16e; Copg1; D6Ertd71e	MGC66965; AU019265; BC056168; D6Wsu16e; Copg1; D6Ertd71e
Mus musculus	Riken	ILMN_205506	ILMN_205506	FGD3	ri|D130045O08|PX00184C23|AK051395|2630					AK051395	Fgd3		ILMN_1255991	006020167	S	2318	CCAGGGATTAGCAGGAGTGAGAGGTGCTTGGGGAGATGAGAGCAAGGCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213491	ILMN_213491	1700012M14RIK	scl41872.7.1_53	NM_023816.1			12963838	NM_023816.1	1700012M14Rik		ILMN_2637581	000360274	S	1196	GGATGGCTACAGTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATC										
Mus musculus	RefSeq	ILMN_220282	ILMN_220282	ACY1	NM_025371.1	NM_025371.1		109652	13384745	NM_025371.1	Acy1	NP_079647.1	ILMN_2945472	001510669	S	1378	GTCCTACCACTGCCAAGGATCTGTTTCCCCTGCCCAGTAATAAAGCCAGC	9	-	106291100-106291149	9qF1	Mus musculus aminoacylase 1 (Acy1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid [goid 4046] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	Acy-1; 1110014J22Rik	Acy-1; 1110014J22Rik
Mus musculus	RefSeq	ILMN_213630	ILMN_240431	POLR2E	NM_025554.2	NM_025554.2		66420	124249076	NM_025554.2	Polr2e	NP_079830.2	ILMN_1234905	007000026	S	528	CTACCCAGAATCCAGGCCGGGGACCCAGTGGCACGGTACTTTGGGATCAA	10	-	79499518-79499567	10qC1	Mus musculus polymerase (RNA) II (DNA directed) polypeptide E (Polr2e), mRNA. XM_994017	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	XAP4; AW208866; 25kDa; RPB5; 2410021N14Rik	XAP4; AW208866; 25kDa; RPB5; 2410021N14Rik
Mus musculus	RefSeq	ILMN_187582	ILMN_261700	PPP1CB	NM_172707.2	NM_172707.2		19046	142385377	NM_172707.2	Ppp1cb	NP_766295.1	ILMN_2724066	001770053	S	775	GGAGCTGATGTAGTCAGTAAATTTCTGAATCGTCATGATTTAGACTTGAT	5	+	32788340-32788389	5qB1	Mus musculus protein phosphatase 1, catalytic subunit, beta isoform (Ppp1cb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]	1200010B19	1200010B19
Mus musculus	RefSeq	ILMN_187582	ILMN_261700	PPP1CB	NM_172707.2	NM_172707.2		19046	142385377	NM_172707.2	Ppp1cb	NP_766295.1	ILMN_2647628	000610202	S	869	CTAAACGACAGTTGGTAACCTTATTTTCTGCCCCAAATTACTGTGGCGAG	5	+	32789972-32790021	5qB1	Mus musculus protein phosphatase 1, catalytic subunit, beta isoform (Ppp1cb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]	1200010B19	1200010B19
Mus musculus	RefSeq	ILMN_197366	ILMN_197366	LOC380870	XM_358449.1	XM_358449.1			38075364	XM_358449.1	LOC380870		ILMN_1258819	003930484	S	243	GGAGGAAGGCCCAGCAATGACAGAGCCCTATGAGAAAAGAGTGCCAGTTG										
Mus musculus	RefSeq	ILMN_224639	ILMN_224639	H2-DMA	NM_010386.2	NM_010386.2		14998	31981712	NM_010386.2	H2-DMa	NP_034516.2	ILMN_2866856	000870154	S	792	TCTTCCTCTGCTCCCAGAGACCGTGCTCAGGTGACTGATTCTTCTCAAGG	17	+	34274483-34274523:34274848-34274856	17qB1	Mus musculus histocompatibility 2, class II, locus DMa (H2-DMa), mRNA.	A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IMP]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IDA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IDA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	H-2Ma; H2-Ma	H-2Ma; H2-Ma
Mus musculus	RefSeq	ILMN_210337	ILMN_210337	PDE7A	NM_008802.1	NM_008802.1		18583	6679246	NM_008802.1	Pde7a	NP_032828.1	ILMN_2604556	001050035	S	3096	TGGATTCTTAGGTGATCAGTTAGCTGCTGCCTCTCCCGTTCAGTCCTGGG	3	-	19127388-19127437	3qA2	Mus musculus phosphodiesterase 7A (Pde7a), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence ISO]	AU015378; AW047537	AU015378; AW047537
Mus musculus	MEEBO	ILMN_185326	ILMN_185326	6530401N04RIK	scl42479.1.886_186				31324531	NM_029545	6530401N04Rik		ILMN_2492961	005560437	S	20	GCCAAGCTCACTACAAGTGCTGGCTACCCGGCATTCCCTGTCCACTGTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of D-amino acids, the dextrorotatory isomer of amino acids [goid 19478] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185326	ILMN_185326	6530401N04RIK	scl42479.1.886_186				31324531	NM_029545	6530401N04Rik		ILMN_2426105	000730681	S	15	GTCTGACAATACTACAAATGTAGCTTTTGGGCCCAGACTTGAGGTCTGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of D-amino acids, the dextrorotatory isomer of amino acids [goid 19478] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218450	ILMN_218450	1700074P13RIK	NM_028550.3	NM_028550.3		73481	133893180	NM_028550.3	1700074P13Rik	NP_082826.1	ILMN_2695988	004730482	S	1506	TAGATAAACTAAATATAATTGATTAAAAAACCAAAGAAGTATATACCTGT	6	-	40876058-40876107	6qB1	Mus musculus RIKEN cDNA 1700074P13 gene (1700074P13Rik), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	AV047902	AV047902
Mus musculus	RefSeq	ILMN_214115	ILMN_244945	4921524L21RIK	XM_919195.3	XM_919195.3		70901	149269559	XM_919195.3	4921524L21Rik	XP_924288.1	ILMN_2644412	004230075	S	1005	CCGAGGAGAGTTAGAGCACATAGACAGCGTGTCTGCCATTGGATCGGAAT				18qA1	PREDICTED: Mus musculus RIKEN cDNA 4921524L21 gene, transcript variant 4 (4921524L21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216413	ILMN_216413	DDX1	NM_134040.1	NM_134040.1		104721	19527255	NM_134040.1	Ddx1	NP_598801.1	ILMN_1257962	004120050	S	1950	GCAACCGTGGGAAGGGATGCTATAACACTAGACTCAAGGAAGATGGCGGC	12	-	13227570-13227619	12qA1.1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 (Ddx1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	DBP-RB; AA409185	DBP-RB; AA409185
Mus musculus	RefSeq	ILMN_216413	ILMN_216413	DDX1	NM_134040.1	NM_134040.1		104721	19527255	NM_134040.1	Ddx1	NP_598801.1	ILMN_2844316	000780097	S	2034	CCGAGATAGAAGAGCACCTGAACTGCACCATTTCCCAGGTCGAGCCAGAT	12	-	13227216-13227265	12qA1.1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 (Ddx1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	DBP-RB; AA409185	DBP-RB; AA409185
Mus musculus	RefSeq	ILMN_198667	ILMN_198667	LOC207853	XM_145641.2	XM_145641.2			38086739	XM_145641.2	LOC207853		ILMN_1221637	001070608	S	962	CCTCTGAGAAGGCTGCCAAGCTGAAGAAGTACGAGGTTTTTGCTGCCTAC										
Mus musculus	RefSeq	ILMN_209228	ILMN_209228	ARMC8	NM_028768.2	NM_028768.2		74125	142348917	NM_028768.2	Armc8	NP_083044.1	ILMN_2593813	002570017	S	2847	AGTGTTCCATAAAAGTTATGTTGAATTTTGGTCAGATGAATATTTGTAAG	9	-	99380541-99380590	9qE3.3	Mus musculus armadillo repeat containing 8 (Armc8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1200015K23Rik; HSPC056	1200015K23Rik; HSPC056
Mus musculus	RefSeq	ILMN_209228	ILMN_209228	ARMC8	NM_028768.2	NM_028768.2		74125	142348917	NM_028768.2	Armc8	NP_083044.1	ILMN_2715784	000270524	S	2172	TACGAGACATGGGGATTGTAGATATTCTACACAAACTGAGTCAGTCGGCA	9	-	99383538-99383587	9qE3.3	Mus musculus armadillo repeat containing 8 (Armc8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1200015K23Rik; HSPC056	1200015K23Rik; HSPC056
Mus musculus	RefSeq	ILMN_209228	ILMN_209228	ARMC8	NM_028768.2	NM_028768.2		74125	142348917	NM_028768.2	Armc8	NP_083044.1	ILMN_2735080	000160286	S	1186	TGTTGAGCTGCAGAGAATCGCTAGCATAACCGACCACCTCATTGCCATGC	9	-	99423613-99423662	9qE3.3	Mus musculus armadillo repeat containing 8 (Armc8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1200015K23Rik; HSPC056	1200015K23Rik; HSPC056
Mus musculus	RefSeq	ILMN_209228	ILMN_209228	ARMC8	NM_028768.2	NM_028768.2		74125	142348917	NM_028768.2	Armc8	NP_083044.1	ILMN_1230072	006400382	S	306	CAGCTAGCAGTCGCCACTATGTTGACAGGCTATTTGACCCTGATCCCCAG	9	-	99451981-99452030	9qE3.3	Mus musculus armadillo repeat containing 8 (Armc8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1200015K23Rik; HSPC056	1200015K23Rik; HSPC056
Mus musculus	Riken	ILMN_203097	ILMN_203097	6430402L23RIK	ri|6430402L23|PX00009F10|AK078178|1051					AK078178	6430402L23Rik		ILMN_2554698	002060626	S	661	CGGGAAGACCCACGTCTCCTGAACTTAGAATTCAACGTGTTGGACACCAT										
Mus musculus	RefSeq	ILMN_221445	ILMN_221445	GRPR	NM_008177.2	NM_008177.2		14829	118130941	NM_008177.2	Grpr	NP_032203.1	ILMN_2735717	004200070	S	1778	CAAAGCACCAAGCCCCACTAGGCAAGTATGGTCAATTAAGTCTTAGAAAT	X	-	159952501-159952550	XqF5	Mus musculus gastrin releasing peptide receptor (Grpr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with bombesin to initiate a change in cell activity [goid 4946] [evidence TAS]	GRP-R; MGC130509	GRP-R; MGC130509
Mus musculus	RefSeq	ILMN_201240	ILMN_201240	LOC382102	XM_356183.1	XM_356183.1			38090070	XM_356183.1	LOC382102		ILMN_1230642	004670184	S	1414	GTTCCAGGACCACAGAAAGCCAACCTCAAAGACCACACAGCAGAGGCAGC										
Mus musculus	RefSeq	ILMN_205365	ILMN_244636	TAF2	XM_919011.2	XM_919011.2		319944	94398931	XM_919011.2	Taf2	XP_924104.1	ILMN_1253166	006660632	S	1045	GAATACCGAGGGAACTGCCGTCTGACAGTGGGAAAGGAAGGGGAGGAGTG				15qD1	PREDICTED: Mus musculus TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 6 (Taf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211795	ILMN_211795	C1QB	NM_009777.2	NM_009777.2		12260	133893071	NM_009777.2	C1qb	NP_033907.1	ILMN_2619620	000580332	S	705	TCGTGGCCGCGATCGGGACAGCATGCAGAAAGTAGTCACCTTCTGTGACT	4	-	136436367-136436416	4qD3	Mus musculus complement component 1, q subcomponent, beta polypeptide (C1qb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223186	ILMN_223186	MAPK8IP1	NM_011162.2	NM_011162.2		19099	34328190	NM_011162.2	Mapk8ip1	NP_035292.2	ILMN_2871628	003170041	S	2801	TCGCAAGGTTGTGTGTGCAAGGAGAGGGCCACAGTAAGCCCCATCTGCCA	2	-	92184598-92184647	2qE1	Mus musculus mitogen activated protein kinase 8 interacting protein 1 (Mapk8ip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]	Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of introducing a phosphate group into a JUN protein [goid 7258] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [evidence NAS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IPI]	Skip; Prkm8ip; mjip-2a; JIP-1; IB1	Skip; Prkm8ip; mjip-2a; JIP-1; IB1
Mus musculus	RefSeq	ILMN_187123	ILMN_260466	VPS39	NM_178851.2	NM_178851.2		269338	133892962	NM_178851.2	Vps39	NP_849182.1	ILMN_2441359	001580215	S	3169	GCTTGCCAGCCCACTGACCGCAGGCTGTTTATACTGCCAGTGTTTTCTCC	2	-	120143302-120143351	2qE5	Mus musculus vacuolar protein sorting 39 (yeast) (Vps39), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]	A230065P22Rik; AW743070; Vam6; Vam6P; mVam6	A230065P22Rik; AW743070; Vam6; Vam6P; mVam6
Mus musculus	MEEBO	ILMN_186795	ILMN_186795	SCL0001647.1_23	scl0001647.1_23	XM_128511.3			38082106	XM_128511.3	scl0001647.1_23		ILMN_2772686	007050292	S	434	AGCCCTATGCCGTCAATGGGAAGATCTCTCCCCAGAGCAACGTGGACTTT										
Mus musculus	RefSeq	ILMN_216053	ILMN_216053	CSTAD	NM_030137.2	NM_030137.2		78617	115292434	NM_030137.2	Cstad	NP_084413.1	ILMN_2666764	004760577	S	277	CACTGAGAGCCATCATGAGTTGGTACAGCCAGTGGCCTGCCTTTCAAGTT	2	+	30463925-30463974	2qB	Mus musculus CSA-conditional, T cell activation-dependent protein (Cstad), mRNA.	The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9530039B02Rik	9530039B02Rik
Mus musculus	MEEBO	ILMN_192811	ILMN_192811	B130038B15RIK	scl00319771.1_25						B130038B15Rik		ILMN_2491543	006420519	S	18	CCGCTGATCCACAATCCAGAATCCTGGGTAATAGGATGTTTCTCAGCCCC										
Mus musculus	RefSeq	ILMN_200396	ILMN_200396	LOC381689	XM_355665.1	XM_355665.1			38081598	XM_355665.1	LOC381689		ILMN_1220070	002320386	S	84	CTCAGCAAGGTCGCCTCCTTAGAAGCCGCTCTCTGTCGCTGCACACGTCC										
Mus musculus	MEEBO	ILMN_193687	ILMN_193687	4732491K20RIK	scl51126.2_473				51769960	XM_488795	4732491K20Rik		ILMN_1255205	004810360	S	8	CCAGCACTGGAAGAGACTCGGGATAAAGAGAACAAGAGGCAGGTGAGATG										
Mus musculus	RefSeq	ILMN_198135	ILMN_198135	CCDC78	XM_354998.4	XM_354998.4		381077	94401811	XM_354998.4	Ccdc78	XP_354998.3	ILMN_2530613	007100307	S	123	GAACGTTGCTCCAGGAGCTGAGGACTGGCTGCCAAGTGCTTCTGGGCACC	17	+	25923647-25923650:25923807-25923852	17qA3.3	PREDICTED: Mus musculus coiled-coil domain containing 78 (Ccdc78), mRNA.					
Mus musculus	Riken	ILMN_206718	ILMN_206718	C230043E16RIK	ri|C230043E16|PX00174L10|AK082379|3137					AK082379	C230043E16Rik		ILMN_1241138	000870687	S	2828	GCCGACATGTATGGAAATGCACTACACATGTCCCTCGTGCTCACAGAGGC										
Mus musculus	RefSeq	ILMN_219747	ILMN_219747	RTCD1	NM_025517.2	NM_025517.2		66368	141802647	NM_025517.2	Rtcd1	NP_079793.1	ILMN_2713160	005340730	S	1403	TGAACGATCAAACGTAATGAATATGTGTAATAGTCAACTTCAATATTAAC	3	-	116191924-116191973	3qG1	Mus musculus RNA terminal phosphate cyclase domain 1 (Rtcd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate [goid 3963] [evidence IEA]	2310009A18Rik; RPC; AI450277; MGC102342	2310009A18Rik; RPC; AI450277; MGC102342
Mus musculus	RefSeq	ILMN_198239	ILMN_198239	LOC224986	XM_148827.3	XM_148827.3			38083234	XM_148827.3	LOC224986		ILMN_1235725	006760196	S	483	CCCCTGTTTCTGATTTACCAAACCCACTTAAACTGCTCCAAGGACCGTGC										
Mus musculus	RefSeq	ILMN_209833	ILMN_241190	ERC1	NM_053204.2	NM_053204.2		111173	120300970	NM_053204.2	Erc1	NP_444434.2	ILMN_2772035	000110180	S	3737	GCAGATGGTGAGCAGGCAGCTTGGGAGAATGAGCTGCAGAAGATGACTCA	6	-	119544809-119544858	6qF1	Mus musculus ELKS/RAB6-interacting/CAST family member 1 (Erc1), transcript variant 1, mRNA. XM_925144 XM_925146 XM_925148 XM_925150 XM_925151 XM_925155 XM_925160 XM_925162	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IDA]	9630025C19Rik; 5033405M01Rik; RAB6IP2B; Rab6ip2; 4930404L01Rik; RAB6IP2A; B430107L16Rik; ELKS; mKIAA1081	9630025C19Rik; 5033405M01Rik; RAB6IP2B; Rab6ip2; 4930404L01Rik; RAB6IP2A; B430107L16Rik; ELKS; mKIAA1081
Mus musculus	RefSeq	ILMN_209833	ILMN_241190	ERC1	NM_053204.2	NM_053204.2		111173	120300970	NM_053204.2	Erc1	NP_444434.2	ILMN_2769712	004280646	S	4222	TCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTCTCCTCAGAGG	6	-	119525302-119525351	6qF1	Mus musculus ELKS/RAB6-interacting/CAST family member 1 (Erc1), transcript variant 1, mRNA. XM_925144 XM_925146 XM_925148 XM_925150 XM_925151 XM_925155 XM_925160 XM_925162	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IDA]	9630025C19Rik; 5033405M01Rik; RAB6IP2B; Rab6ip2; 4930404L01Rik; RAB6IP2A; B430107L16Rik; ELKS; mKIAA1081	9630025C19Rik; 5033405M01Rik; RAB6IP2B; Rab6ip2; 4930404L01Rik; RAB6IP2A; B430107L16Rik; ELKS; mKIAA1081
Mus musculus	RefSeq	ILMN_209833	ILMN_241190	ERC1	NM_053204.2	NM_053204.2		111173	120300970	NM_053204.2	Erc1	NP_444434.2	ILMN_2604210	001090255	S	3073	TCTCCGTAAGAAGGATGACAGGATTGAAGAGCTGGAAGAAGCACTGAGAG	6	-	119663774-119663823	6qF1	Mus musculus ELKS/RAB6-interacting/CAST family member 1 (Erc1), transcript variant 1, mRNA. XM_925144 XM_925146 XM_925148 XM_925150 XM_925151 XM_925155 XM_925160 XM_925162	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IDA]	9630025C19Rik; 5033405M01Rik; RAB6IP2B; Rab6ip2; 4930404L01Rik; RAB6IP2A; B430107L16Rik; ELKS; mKIAA1081	9630025C19Rik; 5033405M01Rik; RAB6IP2B; Rab6ip2; 4930404L01Rik; RAB6IP2A; B430107L16Rik; ELKS; mKIAA1081
Mus musculus	RefSeq	ILMN_248459	ILMN_248459	DEFB23	NM_001037933.1	NM_001037933.1		629114	83776582	NM_001037933.1	Defb23	NP_001033022.1	ILMN_3160185	001240762	S	313	AGCCGAGCTGCCAAGAACCTTTTGTCCAATACCAACTCTGCTATGGGCCC	2	-	152285024-152285073	2qH1	Mus musculus defensin beta 23 (Defb23), mRNA.				Defb23	Defb23
Mus musculus	RefSeq	ILMN_245471	ILMN_245471	ATP2B2	NM_001036684.1	NM_001036684.1		11941	80861453	NM_001036684.1	Atp2b2	NP_001031761.1	ILMN_3113303	000870220	A	6563	GAGCCAGGTTCTCAGACAGGAGCAGAGGAAACTAGCAAGGAGGCCTGACA	6	-	113695954-113696003	6qE3	Mus musculus ATPase, Ca++ transporting, plasma membrane 2 (Atp2b2), transcript variant 2, mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate [goid 46068] [evidence IMP]; The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42428] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The precipitation of specific crystal forms of calcium carbonate with extracellular matrix proteins in the otolith organs of the vertebrate inner ear [goid 45299] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the size of a cell [goid 8361] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IMP]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structure of the cerebellar Purkinje cell layer is generated and organized. Morphogenesis pertains to the creation of form. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21692] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51928] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of calcium ion (Ca2+) [goid 30899] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of calcium (Ca) ions from one side of a membrane to the other [goid 15085] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	wri; D6Abb2e; PMCA2; dfw; wms	wri; D6Abb2e; PMCA2; dfw; wms
Mus musculus	RefSeq	ILMN_245471	ILMN_245471	ATP2B2	NM_001036684.1	NM_001036684.1		11941	80861453	NM_001036684.1	Atp2b2	NP_001031761.1	ILMN_3038944	002070332	I	70	ATTACGGGCTGCCCGCCTGGAACCCGAACCGATCGCTGGCGATTGCCTTA	6	-	113841251-113841300	6qE3	Mus musculus ATPase, Ca++ transporting, plasma membrane 2 (Atp2b2), transcript variant 2, mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate [goid 46068] [evidence IMP]; The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42428] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The precipitation of specific crystal forms of calcium carbonate with extracellular matrix proteins in the otolith organs of the vertebrate inner ear [goid 45299] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the size of a cell [goid 8361] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IMP]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structure of the cerebellar Purkinje cell layer is generated and organized. Morphogenesis pertains to the creation of form. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21692] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51928] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of calcium ion (Ca2+) [goid 30899] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of calcium (Ca) ions from one side of a membrane to the other [goid 15085] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	wri; D6Abb2e; PMCA2; dfw; wms	wri; D6Abb2e; PMCA2; dfw; wms
Mus musculus	RefSeq	ILMN_223541	ILMN_223541	ZFP759	NM_172392.3	NM_172392.3		268670	119226194	NM_172392.3	Zfp759	NP_765980.3	ILMN_1256222	006550113	S	3412	TCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGAAATAAA	13	+	67242653-67242702	13qB3	Mus musculus zinc finger protein 759 (Zfp759), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rslcan-8; Rslcan8; BC028265	Rslcan-8; Rslcan8; BC028265
Mus musculus	MEEBO	ILMN_211948	ILMN_211948	D130005J21RIK	scl41754.4.1_9	NM_176989.2			31342535	NM_176989.2	D130005J21Rik		ILMN_2621057	006520397	S	1331	GGACCTGATAACTACTAGCCAAACTCCTGTATTATTGAGCAGTCCTCCAA										
Mus musculus	MEEBO	ILMN_188811	ILMN_188811	SCL000408.1_6	scl000408.1_6	AK009508.1			12844345	AK009508.1	scl000408.1_6		ILMN_2455920	007160079	S	11	GAGAGTGTGAAGATGGCAGCTGCGGACGAGCCCAAGCCCAAAAAGCTCAA										
Mus musculus	Riken	ILMN_203801	ILMN_203801	UNC13H1	ri|A230085L07|PX00130E12|AK039015|4224					AK039015	Unc13h1		ILMN_2560083	001710452	S	2626	TGAGCAGTTTGGTGGTTCGATTTGTGTGGAATTCTCAGGCCATCCCAGCC										
Mus musculus	RefSeq	ILMN_201300	ILMN_201300	LOC382393	XM_356484.1	XM_356484.1			38090642	XM_356484.1	LOC382393		ILMN_1232887	006450379	S	2	TGGACCAGAATCTCCGCTACGACAGCTTCCAGTCTCGTCTTCAAGCGCCG										
Mus musculus	RefSeq	ILMN_197898	ILMN_197898	LOC380616	XM_358355.1	XM_358355.1			38079275	XM_358355.1	LOC380616		ILMN_2529754	007610458	S	139	ATAAGGCTGGCCCAGAATGCTTTCACTGTGAAGAAGGGTGCTCTAAGTCA										
Mus musculus	MEEBO	ILMN_195745	ILMN_195745	2210414B05RIK	scl25717.2.1_4						2210414B05Rik		ILMN_2518312	007100138	S	11	CTGGAGTTGAATTGGCTGTTCATCCCACAACTCAAAGAGTTATCCTTGGC										
Mus musculus	RefSeq	ILMN_198474	ILMN_198474	LOC330441	XM_284252.2	XM_284252.2			38085440	XM_284252.2	LOC330441		ILMN_1233164	002490471	S	237	ACCTCCCCCTCCCCAAAGGGGGAGACCAAAAAAGTTCAAGGACCTCAGTG										
Mus musculus	RefSeq	ILMN_218231	ILMN_313361	LOC100045950	XM_001475093.1	XM_001475093.1		100045950	149251551	XM_001475093.1	LOC100045950	XP_001475143.1	ILMN_1258076	002490242	S	4086	CAGAACTTGGGCTCGCTCAGGAAGTGGACCAGGAAATGTAGTGATCACTG					PREDICTED: Mus musculus similar to ets variant gene 3 (LOC100045950), mRNA.					
Mus musculus	RefSeq	ILMN_201206	ILMN_201206	LOC385036	XM_358007.1	XM_358007.1			38089825	XM_358007.1	LOC385036		ILMN_2541471	002140184	S	180	CCACGAGGTGGCAGTGCTGAGACACCTGGAGAATTGGAGCACTGGATCAT										
Mus musculus	Riken	ILMN_206796	ILMN_206796	D730011G23RIK	ri|D730011G23|PX00090M07|AK085684|3597					AK085684	D730011G23Rik		ILMN_2582748	000150451	S	3155	ATGTTTCAGATCCTCAGCTCGGGGAAGGTGCTGGCTGGACTGGAGCTCTA										
Mus musculus	RefSeq	ILMN_247636	ILMN_247636	EG622320	NM_001039039.1	NM_001039039.1		622320	85702329	NM_001039039.1	EG622320	NP_001034128.1	ILMN_2871359	003830408	S	2586	TGTGGCTGTCTTGAGCCGCTGCACCAGGGGTACTCTGGAAAGTTCTGCAG	7	+	97225025-97225074	7qE1	Mus musculus predicted gene, EG622320 (EG622320), mRNA.					
Mus musculus	MEEBO	ILMN_185366	ILMN_185366	SCL0003985.1_232	scl0003985.1_232	AK032039.1			26082652	AK032039.1	scl0003985.1_232		ILMN_2426446	005420424	S	9	GGTCTAAAAGCAACTGGGAAGATGACGAGCAGGACAGGCAGCGGGTTCCT										
Mus musculus	RefSeq	ILMN_221790	ILMN_221790	MT4	NM_008631.2	NM_008631.2		17752	114326447	NM_008631.2	Mt4	NP_032657.1	ILMN_2740391	005420274	S	156	CCCAGGCTGTGCCAAGTGTGCCCGGGGCTGCATCTGCAAAGGGGGTTCAG	8	+	96662696-96662745	8qC5	Mus musculus metallothionein 4 (Mt4), mRNA.		The regulation of the levels, transport, and metabolism of metal ions within a cell or between a cell and its external environment [goid 6875] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus [goid 46686] [evidence ISO]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IDA]	MT-IV	MT-IV
Mus musculus	Riken	ILMN_205349	ILMN_205349	B230349N02RIK	ri|B230349N02|PX00160N17|AK046195|3204					AK046195	B230349N02Rik		ILMN_1243763	001070068	S	1373	CTCTTGGTTACGATCTGCTGGGCAGGGAGGAAATGGAGGAGGGTCTCTGG										
Mus musculus	Riken	ILMN_205121	ILMN_205121	E130317O18RIK	ri|E130317O18|PX00208L13|AK053878|887					AK053878	E130317O18Rik		ILMN_1252774	007570154	S	674	GCAATGCGTCTGTTGTGCTCGAAGAAACTGGAGGGCTGATGGCCAGGAAG										
Mus musculus	RefSeq	ILMN_221438	ILMN_221438	NUMA1	NM_133947.2	NM_133947.2		101706	29788769	NM_133947.2	Numa1	NP_598708.2	ILMN_2735625	001110039	S	6450	CACCAGTGCTTACGTGGCCCCACTGCATTGTCAGCACTGACCTTGCTTGG	7	+	109162770-109162819	7qE3	Mus musculus nuclear mitotic apparatus protein 1 (Numa1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]		Interacting selectively with monomeric or multimeric forms of tubulin, including microtubules [goid 15631] [evidence ISO]	AA764025; AU014979; 6720401E04Rik; AL022610	AA764025; AU014979; 6720401E04Rik; AL022610
Mus musculus	RefSeq	ILMN_201108	ILMN_226560	LOC673419	XM_001005543.1	XM_001005543.1		673419	94421364	XM_001005543.1	LOC673419	XP_001005543.1	ILMN_1244818	004540181	S	22	TGCCTGGCCCTGAGGCTGGAAGAGCAGCAGAAACTGAAGTGTGTGGCCCT					PREDICTED: Mus musculus similar to spindle assembly associated Sfi1 homolog isoform b (LOC673419), mRNA.					
Mus musculus	RefSeq	ILMN_238962	ILMN_238962	SLC22A18	NM_008767.2	NM_008767.2		18400	112363087	NM_008767.2	Slc22a18	NP_032793.2	ILMN_3152079	004920136	A	1263	TGCTGGGCCTCTCTGCATCTGTGCAACCATTGACCCGAACTCTAGGACCC	7	+	150665759-150665785:150666295-150666317	7qF5	Mus musculus solute carrier family 22 (organic cation transporter), member 18 (Slc22a18), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence TAS]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]	Slc22a1l; BWSCR1A; BWR1A; ITM; Impt1; TSSC5; AW260131; HET; p45-BWR1A; Orctl2	Slc22a1l; BWSCR1A; BWR1A; ITM; Impt1; TSSC5; AW260131; HET; p45-BWR1A; Orctl2
Mus musculus	RefSeq	ILMN_196320	ILMN_238962	SLC22A18	NM_008767.2	NM_008767.2		18400	112363087	NM_008767.2	Slc22a18	NP_032793.2	ILMN_2702633	007100128	S	585	AGATGGTCATCACTGATCTGACAGCGCCCACAGAGCGGCCCGCAGCACTG	7	+	150660724-150660773	7qF5	Mus musculus solute carrier family 22 (organic cation transporter), member 18 (Slc22a18), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence TAS]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]	Slc22a1l; BWSCR1A; BWR1A; ITM; Impt1; TSSC5; AW260131; HET; p45-BWR1A; Orctl2	Slc22a1l; BWSCR1A; BWR1A; ITM; Impt1; TSSC5; AW260131; HET; p45-BWR1A; Orctl2
Mus musculus	Riken	ILMN_201613	ILMN_201613	SNX5	ri|0910001N05|R000005D17|AK003091|731					AK003091	Snx5		ILMN_2543206	004250053	S	46	GTAGCCGCTCATAGGACTCAGCAAAGTAGAGTAGGCACATCGCGCAAGGA							The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_206250	ILMN_311938	LOC100045421	XM_001474308.1	XM_001474308.1		100045421	149250346	XM_001474308.1	LOC100045421	XP_001474358.1	ILMN_1230578	004150524	S	1139	GGCTGTGTATGTTCACTCCCAGGATTGGCAGAGGGCTTGGTTCTCATCTG					PREDICTED: Mus musculus hypothetical protein LOC100045421 (LOC100045421), mRNA.					
Mus musculus	MEEBO	ILMN_191860	ILMN_191860	D430025H09RIK	scl35738.20.1_23				31981831	NM_145616	D430025H09Rik		ILMN_2482848	002070358	S	3	TATAGGCCAAAAGAAAAATTAAAGTTAGTATAAAATATGAACATTTATAT										
Mus musculus	RefSeq	ILMN_197729	ILMN_319439	LOC632124	XR_031110.1	XR_031110.1		632124	149267012	XR_031110.1	LOC632124		ILMN_2529164	005890427	S	906	CCTTGACCTGTTTGGTGCTGGGACTGCACCCACTTCAACCACACTGTCCT					PREDICTED: Mus musculus similar to Cytochrome P450, family 2, subfamily d, polypeptide 13 (LOC632124), misc RNA.					
Mus musculus	MEEBO	ILMN_219541	ILMN_219541	ADAMTSL1	scl25307.10.1_185	XM_131451.2			28497343	XM_131451.2	Adamtsl1		ILMN_2710211	001440603	S	2721	CCCACAGTTCCATTGAGCTTTTCCTTGCTTGGGAAAACATGCCTTCAGTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	MEEBO	ILMN_222029	ILMN_222029	A230028O05RIK	scl49285.3_472				51829998	XM_488773	A230028O05Rik		ILMN_2743629	001240086	S	4040	TGGAGGCATCCGTTTCTCTTCCGCTTTAATTGTCATTTGTGCCTTCCCTC										
Mus musculus	MEEBO	ILMN_194766	ILMN_194766	1700012H05RIK	scl32227.1.275_155						1700012H05Rik		ILMN_2509401	004570202	S	4	GGCCTCAGGACTGGCATCGGAAGTCTAGAAAAAGAAGAATCAGTTTCCTG										
Mus musculus	RefSeq	ILMN_220561	ILMN_220561	SPAG4L	NM_029599.1	NM_029599.1		76407	32261333	NM_029599.1	Spag4l	NP_083875.1	ILMN_3106706	000130646	A	1025	GAAGATCTCCAGCAACTGGGGGAACCCTCGCTTCACCTGCATGTACCGTG	2	-	153682006-153682055	2qH1	Mus musculus sperm associated antigen 4-like (Spag4l), mRNA.				SRG4; 1700021O15Rik	SRG4; 1700021O15Rik
Mus musculus	RefSeq	ILMN_220561	ILMN_220561	SPAG4L	NM_029599.1	NM_029599.1		76407	32261333	NM_029599.1	Spag4l	NP_083875.1	ILMN_3033086	001400592	I	435	TACCAGGAGAAGGTACGACATCACACTGGGGAAATCCAGGACCTACGAGG	2	-	153691094-153691143	2qH1	Mus musculus sperm associated antigen 4-like (Spag4l), mRNA.				SRG4; 1700021O15Rik	SRG4; 1700021O15Rik
Mus musculus	MEEBO	ILMN_218815	ILMN_218815	DDX11	scl50554.25.1_3	XM_128714.3			38082752	XM_128714.3	Ddx11		ILMN_2700550	006250437	S	3304	CCATCACAAAGACTTGGACCCTGGCCATAGACCTTTCTGTGTCCCACAAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223630	ILMN_240127	CYPT2	NM_173436.1	NM_173436.1		245566	91206397	NM_173436.1	Cypt2	NP_775612.1	ILMN_1238134	006400711	S	393	GGAGCGGAGCCAACTAAAGCTCATCGAACTGGAACCGAGCGAGATTACAG	X	+	102695691-102695740	XqD	Mus musculus cysteine-rich perinuclear theca 2 (Cypt2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC74041; Ckt1	MGC74041; Ckt1
Mus musculus	RefSeq	ILMN_208871	ILMN_208871	NHLRC2	NM_025811.1	NM_025811.1		66866	29789157	NM_025811.1	Nhlrc2	NP_080087.1	ILMN_3007312	002470348	S	3624	GTGTTTTCTTTAACCCCGTAAGAAACAGCACTGGAAGGGATCCTGGAGAG	19	+	56651786-56651835	19qD2	Mus musculus NHL repeat containing 2 (Nhlrc2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AV002846; 1200003G01Rik	AV002846; 1200003G01Rik
Mus musculus	MEEBO	ILMN_216685	ILMN_216685	EME2	scl50194.6_30	XM_128555.4			38082082	XM_128555.4	Eme2		ILMN_1224485	007550433	S	1515	GCCAAGCTCTCTCAAAGCCGCTGGACAGAGACAGATAAACAATAGACACA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210518	ILMN_210518	EZH2	NM_007971.1	NM_007971.1		14056	6679720	NM_007971.1	Ezh2	NP_031997.1	ILMN_2606429	000580458	S	2568	CAGTGAGTTTTTGCAATAATGCAGTATGGTACATTTTTCAAATTTGAATA	6	-	47480297-47480346	6qB2.3	Mus musculus enhancer of zeste homolog 2 (Drosophila) (Ezh2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12 [goid 35098] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle cell differentiation [goid 51154] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence IDA]	Enx-1; MGC90723; mKIAA4065; KIAA4065; Enx1h	Enx-1; MGC90723; mKIAA4065; KIAA4065; Enx1h
Mus musculus	RefSeq	ILMN_210518	ILMN_210518	EZH2	NM_007971.1	NM_007971.1		14056	6679720	NM_007971.1	Ezh2	NP_031997.1	ILMN_2988572	006900072	S	2322	CAGGCTGATGCCCTGAAGTATGTGGGCATCGAACGAGAAATGGAAATCCC	6	-	47480543-47480592	6qB2.3	Mus musculus enhancer of zeste homolog 2 (Drosophila) (Ezh2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12 [goid 35098] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle cell differentiation [goid 51154] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence IDA]	Enx-1; MGC90723; mKIAA4065; KIAA4065; Enx1h	Enx-1; MGC90723; mKIAA4065; KIAA4065; Enx1h
Mus musculus	RefSeq	ILMN_210518	ILMN_210518	EZH2	NM_007971.1	NM_007971.1		14056	6679720	NM_007971.1	Ezh2	NP_031997.1	ILMN_1234171	001300035	S	408	CCAGCACAAGTCATCCCGTTAAAGACCCTGAATGCAGTCGCCTCGGTGCC	6	-	47508216-47508265	6qB2.3	Mus musculus enhancer of zeste homolog 2 (Drosophila) (Ezh2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12 [goid 35098] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle cell differentiation [goid 51154] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence IDA]	Enx-1; MGC90723; mKIAA4065; KIAA4065; Enx1h	Enx-1; MGC90723; mKIAA4065; KIAA4065; Enx1h
Mus musculus	RefSeq	ILMN_221706	ILMN_221706	ABHD5	NM_026179.2	NM_026179.2		67469	88703067	NM_026179.2	Abhd5	NP_080455.1	ILMN_2739295	006350072	S	2817	GGTAGAACATTTGTGCAGGACTCTTACTTGGCAGTCACCAGCCTCAGTCT	9	+	122290310-122290359	9qF4	Mus musculus abhydrolase domain containing 5 (Abhd5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that activates or increases the activity of the enzyme lipoprotein lipase [goid 51006] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence ISA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	IECN5; 2010002J10Rik; CDS; NCIE2; CGI-58; 1300003D03Rik	IECN5; 2010002J10Rik; CDS; NCIE2; CGI-58; 1300003D03Rik
Mus musculus	RefSeq	ILMN_202023	ILMN_256411	ZFP558	XM_906919.2	XM_906919.2		72230	94385644	XM_906919.2	Zfp558	XP_912012.1	ILMN_1228386	005720341	S	1296	GTGCCAGGAGTGTGGGAAAACCTTCAGGAAGAGCTCATATCTAACCCAGC				9qA2	PREDICTED: Mus musculus zinc finger protein 558, transcript variant 3 (Zfp558), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223269	ILMN_256411	ZFP558	XM_906919.2	XM_906919.2		72230	94385644	XM_906919.2	Zfp558	XP_912012.1	ILMN_1259136	003870400	S	673	CTGATATCCCAGTTGGAAGAAGAAGACAAAGTTATAAGAGAGGACAGAGG				9qA2	PREDICTED: Mus musculus zinc finger protein 558, transcript variant 3 (Zfp558), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221047	ILMN_221047	PAXIP1	NM_018878.2	NM_018878.2		55982	42734450	NM_018878.2	Paxip1	NP_061366.2	ILMN_2787775	002810129	S	4814	CACCCGAGGTTGGCTGGGAGGGCAAGGTGACAAACAAATGCTGGTTATGA	5	-	28067395-28067444	5qB1	Mus musculus PAX interacting (with transcription-activation domain) protein 1 (Paxip1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D5Ertd149e; PTIP	D5Ertd149e; PTIP
Mus musculus	MEEBO	ILMN_196298	ILMN_196298	9845300_5100	9845300_5100						9845300_5100		ILMN_1232348	003310095	S	2	ACGAGAGCTGACCCGCCGTCGCCCTGGCCTCCTCCTCGTCCTCCCCGTCC										
Mus musculus	RefSeq	ILMN_198531	ILMN_198531	LOC236627	XM_141601.2	XM_141601.2			38086050	XM_141601.2	LOC236627		ILMN_1223083	003420286	S	581	TGGCTAGAAAACACGAAGGCTCCAGTGGAGGAGTTATCCGCTTGGCAACC										
Mus musculus	RefSeq	ILMN_195742	ILMN_247241	DLG2	NM_011807.2	NM_011807.2		23859	118136296	NM_011807.2	Dlg2	NP_035937.2	ILMN_2518284	004250563	S	6901	GTTTCTCCCTTGCAGCTCACAAGGACAGACAGCTAAGTGGCAAGGTTGAC	7	+	99597248-99597297	7qE1	Mus musculus discs, large homolog 2 (Drosophila) (Dlg2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PSD93; Gm1197; B330007M19Rik; A330103J02Rik; Dlgh2	PSD93; Gm1197; B330007M19Rik; A330103J02Rik; Dlgh2
Mus musculus	RefSeq	ILMN_214830	ILMN_230760	GJB6	NM_001010937.1	NM_001010937.1		14623	58331125	NM_001010937.1	Gjb6	NP_001010937.1	ILMN_1250356	000610746	S	1998	GAGCCTTTCCACCTATGGTGAACAGTGCAGACATGAATATGATCTCGCCA	14	-	57742163-57742212	14qC3	Mus musculus gap junction protein, beta 6 (Gjb6), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process by which the anatomical structures of the ear are generated and organized. Morphogenesis pertains to the creation of form. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 42471] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA958971; Cx30; D14Bwg0506e	AA958971; Cx30; D14Bwg0506e
Mus musculus	RefSeq	ILMN_222594	ILMN_222594	RGS19	NM_026446.3	NM_026446.3		56470	142365528	NM_026446.3	Rgs19	NP_080722.1	ILMN_2752044	002680278	S	1391	GGTCTTTCCAAAGAAACTAGTCACAGTGTCATCTTAATCTTACTGATCCA	2	-	181423144-181423193	2qH4	Mus musculus regulator of G-protein signaling 19 (Rgs19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	2610042F04Rik; AI324841; GAIP; AW547781	2610042F04Rik; AI324841; GAIP; AW547781
Mus musculus	Riken	ILMN_207252	ILMN_207252	4833414G05RIK	ri|F830021M15|PL00006M07|AK089792|1307					AK089792	4833414G05Rik		ILMN_1225223	006550433	S	864	CTGTGACCCCCCCGCCCCAATCAGTTTCTACAGGCTCAGAGGACCTTTTT										
Mus musculus	MEEBO	ILMN_217855	ILMN_217855	9030605E16RIK	scl075757.1_316	NM_029417.1			13386397	NM_029417.1	9030605E16Rik		ILMN_2688446	005420519	S	2270	CAGTTTCCTCATTGCTTAGACAGTTGGTATGAGTTCTAAGGGCCCCAAAG										
Mus musculus	RefSeq	ILMN_190163	ILMN_251818	PUM1	NM_030722.1	NM_030722.1		80912	13507675	NM_030722.1	Pum1	NP_109647.1	ILMN_1223937	007320441	S	4954	CAGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCG	4	+	130337112-130337161	4qD2.2-qD2.3	Mus musculus pumilio 1 (Drosophila) (Pum1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	mKIAA0099; AA517475; Pumm	mKIAA0099; AA517475; Pumm
Mus musculus	RefSeq	ILMN_250993	ILMN_250993	IYD	NM_027391.1	NM_027391.1		70337	21312561	NM_027391.1	Iyd	NP_081667.1	ILMN_2796264	003850092	S	1416	GTAGCTGGCAATTATCTGAACATGAGTTGCATGGAGTGTGCCGGGGCTGG	10	-	6791738-6791787	10qA1	Mus musculus iodotyrosine deiodinase (Iyd), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: iodide + H2O2 = iodine + 2 H2O [goid 4447] [evidence IDA]; Catalysis of the reaction: iodide + H2O2 = iodine + 2 H2O [goid 4447] [evidence ISA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	0610009A07Rik; AI265638	0610009A07Rik; AI265638
Mus musculus	RefSeq	ILMN_185243	ILMN_237058	CTTNBP2	XM_987526.1	XM_987526.1		30785	94378389	XM_987526.1	Cttnbp2	XP_992620.1	ILMN_2425376	007610386	S	1370	CCTCCAAGGAAACTGATACTGCTTCCTTTGAGTCTGACTGGGAAAATGAC				6qA2	PREDICTED: Mus musculus cortactin binding protein 2, transcript variant 5 (Cttnbp2), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISO]	Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence ISO]		
Mus musculus	RefSeq	ILMN_235834	ILMN_235834	ALG1	NM_145362.1	NM_145362.1		208211	21703729	NM_145362.1	Alg1	NP_663337.1	ILMN_3000759	005860068	S	1069	AGGTGGTGGACATGTTTGGGTGCCACTTGCCTGTGTGTGCCGTGAACTTC	16	+	5242642-5242691	16qA1	Mus musculus asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase) (Alg1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: GDP-mannose + chitobiosyldiphosphodolichol = GDP + beta-D-mannosylchitobiosyldiphosphodolichol [goid 4578] [evidence IEA]	MGC18946; HMT1; HMAT1	MGC18946; HMT1; HMAT1
Mus musculus	RefSeq	ILMN_196028	ILMN_225731	LOC207685	XM_992327.1	XM_992327.1		207685	94401047	XM_992327.1	LOC207685	XP_997421.1	ILMN_1246353	005860133	S	70	TGGCTCTCTGCTCAGGAGCCAGTTCCCAGGCTGTTGTGACTCAGGAATCT					PREDICTED: Mus musculus hypothetical protein LOC207685, transcript variant 1 (LOC207685), mRNA.					
Mus musculus	RefSeq	ILMN_215766	ILMN_225314	LOC434609	XM_908869.2	XM_908869.2		434609	94410607	XM_908869.2	LOC434609	XP_913962.1	ILMN_2663360	005690433	S	76	CCTGTCAGGAACTGCAGGTGTCCATTGCCAGATCCAGCTGCAGCAGTCTG				12qF2	PREDICTED: Mus musculus similar to Ig heavy chain V region VH558 A1/A4 precursor (LOC434609), mRNA.					
Mus musculus	RefSeq	ILMN_214078	ILMN_214078	CHL1	NM_007697.2	NM_007697.2		12661	110347544	NM_007697.2	Chl1	NP_031723.2	ILMN_1248706	007160259	S	3705	CACTGATATTGTTAACTATTTGCTTTGTGAAGAGGAACAGAGGTGGAAAG	6	+	103665337-103665386	6qE1	Mus musculus cell adhesion molecule with homology to L1CAM (Chl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory [goid 50890] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CALL; A530023M13Rik; LICAM2	CALL; A530023M13Rik; LICAM2
Mus musculus	RefSeq	ILMN_214078	ILMN_214078	CHL1	NM_007697.2	NM_007697.2		12661	110347544	NM_007697.2	Chl1	NP_031723.2	ILMN_2668741	006250280	S	4264	TGCAGAACACGAAACAAATCCTGTACTTAGATCCACTTTGACTGAATCCA	6	+	103679542-103679591	6qE1	Mus musculus cell adhesion molecule with homology to L1CAM (Chl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory [goid 50890] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CALL; A530023M13Rik; LICAM2	CALL; A530023M13Rik; LICAM2
Mus musculus	RefSeq	ILMN_214078	ILMN_214078	CHL1	NM_007697.2	NM_007697.2		12661	110347544	NM_007697.2	Chl1	NP_031723.2	ILMN_2687300	003710376	S	3772	GGAAGATTTACACCCAGATCCAGAAGTTCAGTCAGCAAAAGATGAAACTT	6	+	103667563-103667612	6qE1	Mus musculus cell adhesion molecule with homology to L1CAM (Chl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory [goid 50890] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CALL; A530023M13Rik; LICAM2	CALL; A530023M13Rik; LICAM2
Mus musculus	RefSeq	ILMN_184632	ILMN_254819	BMP2K	NM_080708.1	NM_080708.1		140780	18129621	NM_080708.1	Bmp2k	NP_542439.1	ILMN_1254526	005090600	S	6270	CGGCCATCCAGGCCTGGGTACTTCACTAAAGCATTGTTAGAAGGTGCACG	5	+	97519769-97519818	5qE3	Mus musculus BMP2 inducible kinase (Bmp2k), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19208] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	AV128808; AA673486; BIKE; 4933417M22Rik	AV128808; AA673486; BIKE; 4933417M22Rik
Mus musculus	RefSeq	ILMN_254819	ILMN_254819	BMP2K	NM_080708.1	NM_080708.1		140780	18129621	NM_080708.1	Bmp2k	NP_542439.1	ILMN_2842060	001300689	S	6117	CCCTGGGCTGTGTGTCCTGGGCAGTTAGGAAATCACTTGGCTCTCAGATG	5	+	97519616-97519665	5qE3	Mus musculus BMP2 inducible kinase (Bmp2k), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19208] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	AV128808; AA673486; BIKE; 4933417M22Rik	AV128808; AA673486; BIKE; 4933417M22Rik
Mus musculus	RefSeq	ILMN_193859	ILMN_254819	BMP2K	NM_080708.1	NM_080708.1		140780	18129621	NM_080708.1	Bmp2k	NP_542439.1	ILMN_2501079	001190482	S	5526	CACCTGCTGGGCTGTCAGAGGCAATGTAAACATTTTAAGCTGTGGCAGAG	5	+	97519025-97519074	5qE3	Mus musculus BMP2 inducible kinase (Bmp2k), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19208] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	AV128808; AA673486; BIKE; 4933417M22Rik	AV128808; AA673486; BIKE; 4933417M22Rik
Mus musculus	Riken	ILMN_203603	ILMN_203603	A930004L03RIK	ri|A930004L03|PX00065G03|AK044272|2787					AK044272	A930004L03Rik		ILMN_1255719	004590653	S	2729	CATTGCATTCTTCCAATTAGGGATAGGTGTCAAGTGATGGGGAGGTCAGC										
Mus musculus	MEEBO	ILMN_185151	ILMN_185151	TXNRD2	scl49360.23.1_15	NM_013711.1			7305602	NM_013711.1	Txnrd2		ILMN_2424605	002140612	S	20	GAAGATGTGGATGGAACATCGTGTGTCCTGCAGGGATGACTATACCCCTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen radical stimulus. An oxygen radical is any oxygen species that carries a free electron; examples include hydroxyl radicals and the superoxide anion [goid 305] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a disulfide group [goid 16654] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: thioredoxin + NADP+ = thioredoxin disulfide + NADPH + H+ [goid 4791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_209367	ILMN_209367	C330049O21RIK	scl0320493.2_296	NM_177174.2			31342982	NM_177174.2	C330049O21Rik		ILMN_2595173	001580360	S	2082	AGAACAATATACTAAAATTACACTATGTGTTATGGAGCATTCCTTTCTTT										
Mus musculus	RefSeq	ILMN_240874	ILMN_240874	KHSRP	NM_010613.2	NM_010613.2		16549	51492006	NM_010613.2	Khsrp	NP_034743.2	ILMN_3003567	004920593	S	3545	CCTCTGAGGGAAGCGGTTCACTATCTCCCTACTGTCTGGGGCCCTATTCT	17	-	57160851-57160900	17qD	Mus musculus KH-type splicing regulatory protein (Khsrp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	6330409F21Rik; KSRP	6330409F21Rik; KSRP
Mus musculus	RefSeq	ILMN_198196	ILMN_240874	KHSRP	NM_010613.2	NM_010613.2		16549	51492006	NM_010613.2	Khsrp	NP_034743.2	ILMN_2530819	005570685	S	2018	CACCAAGGCCTGGGAGGAGTACTACAAGAAGCAAGCACAAGTGGCCACTG	17	-	57162378-57162393:57162482-57162515	17qD	Mus musculus KH-type splicing regulatory protein (Khsrp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	6330409F21Rik; KSRP	6330409F21Rik; KSRP
Mus musculus	RefSeq	ILMN_210900	ILMN_240874	KHSRP	NM_010613.2	NM_010613.2		16549	51492006	NM_010613.2	Khsrp	NP_034743.2	ILMN_2610342	001190669	S	2416	GAAGAGGCTCCTCCAGTAGCCACTGTCGTGCGACGTTGTCGGGTGCTGGG	17	-	57161980-57162029	17qD	Mus musculus KH-type splicing regulatory protein (Khsrp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	6330409F21Rik; KSRP	6330409F21Rik; KSRP
Mus musculus	RefSeq	ILMN_221696	ILMN_310142	LOC100047670	XM_001476942.1	XM_001476942.1		100047670	149255644	XM_001476942.1	LOC100047670	XP_001476992.1	ILMN_1254554	006220397	S	3015	GCCAGGCAGTATCCTGTGGAGGGAGGAGGGTGTACGTTCGTTTACTATGG					PREDICTED: Mus musculus similar to required for meiotic nuclear division 5 homolog A (LOC100047670), mRNA.					
Mus musculus	RefSeq	ILMN_196371	ILMN_310142	LOC100047670	XM_001476942.1	XM_001476942.1		100047670	149255644	XM_001476942.1	LOC100047670	XP_001476992.1	ILMN_1236937	002480086	S	5238	GGCTCAGATGCTCAGGATGTATTCCTTTGGCTTACCCCGTGCTCCTGGGT					PREDICTED: Mus musculus similar to required for meiotic nuclear division 5 homolog A (LOC100047670), mRNA.					
Mus musculus	RefSeq	ILMN_218103	ILMN_218103	CYP4A14	NM_007822.1	NM_007822.1		13119	6681120	NM_007822.1	Cyp4a14	NP_031848.1	ILMN_2691680	001940273	S	2275	TGCCATCTGGTCCCTACTGTTAGAATGTGGTAGAATTCTCAGCTCCTGAG	4	-	115158966-115159015	4qD1	Mus musculus cytochrome P450, family 4, subfamily a, polypeptide 14 (Cyp4a14), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: octane + reduced rubredoxin + O2 = 1-octanol + oxidized rubredoxin + H2O [goid 18685] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC107660; AI314743	MGC107660; AI314743
Mus musculus	RefSeq	ILMN_186633	ILMN_186633	V1RE12	NM_134231.1	NM_134231.1		171265	21717778	NM_134231.1	V1re12	NP_598992.1	ILMN_2437192	004540687	S	873	CATGAGAAGTTACTCCCTCATGTCTAGATTCAACTTGGCCCATTTAAGAA	7	-	27396175-27396224	7qA3	Mus musculus vomeronasal 1 receptor, E12 (V1re12), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]		
Mus musculus	RefSeq	ILMN_220099	ILMN_220099	NR0B2	NM_011850.2	NM_011850.2		23957	31981365	NM_011850.2	Nr0b2	NP_035980.1	ILMN_2717630	005420398	S	1055	TCCTGACTTTGTACAGAACTAAATTAAGTTATTGTTTTTTGTAATAAAAC	4	+	133112388-133112437	4qD2.3	Mus musculus nuclear receptor subfamily 0, group B, member 2 (Nr0b2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	SHP; Shp1; SHP-1	SHP; Shp1; SHP-1
Mus musculus	MEEBO	ILMN_194738	ILMN_194738	AHCY	scl18466.10_8				7709979	NM_016661	Ahcy		ILMN_1214128	000630564	S	1370	GCCAATGTCACCAACTTTGTGGTTAGTTTGCCTGTGTTCTGATCCGTCCC						That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of S-adenosylhomocysteine, forming homocysteine and then methionine [goid 19510] [evidence IDA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine [goid 4013] [evidence IDA]		
Mus musculus	MEEBO	ILMN_194738	ILMN_194738	AHCY	scl18466.10_8				7709979	NM_016661	Ahcy		ILMN_1237919	003990246	S	6	CTCCCTCTTATTTGCCCAAGTGATCAATTTACTGAACCCATTTGACCTGG						That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of S-adenosylhomocysteine, forming homocysteine and then methionine [goid 19510] [evidence IDA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine [goid 4013] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199827	ILMN_199827	LOC383955	XM_357347.1	XM_357347.1			38077717	XM_357347.1	LOC383955		ILMN_2588066	001340019	S	899	GCTCAGACCCTACAGTAGATCACAGCACTGACCGTGGCTCAGGCCCTACA										
Mus musculus	RefSeq	ILMN_198777	ILMN_198777	LOC233934	XM_133889.3	XM_133889.3			38087513	XM_133889.3	LOC233934		ILMN_1225589	002750110	S	111	GCAGAACTTGTGGAAGAGGCCAAATGGGTGTGGCTGCCTGCTGATAGGAG										
Mus musculus	MEEBO	ILMN_195717	ILMN_195717	TRAV2_AF259071_T_CELL_RECEPTOR_ALPHA_VARIABLE_2_75	TRAV2_AF259071_T_cell_receptor_alpha_variable_2_75						TRAV2_AF259071_T_cell_receptor_alpha_variable_2_75		ILMN_2518043	006020095	S	6	GGAGGCCTATGAAGGGCAAGAAGTGAACGTGTCCTGCAGCCATACAAACA										
Mus musculus	RefSeq	ILMN_209985	ILMN_316443	LOC100044185	XM_001471875.1	XM_001471875.1		100044185	149269014	XM_001471875.1	LOC100044185	XP_001471925.1	ILMN_2601080	003180072	S	692	GAGGTTTTGTGAATTCCAGTCGTCCTTTACGTGTCCTCACTGCTGTAGCA					PREDICTED: Mus musculus hypothetical protein LOC100044185 (LOC100044185), mRNA.					
Mus musculus	RefSeq	ILMN_209985	ILMN_316443	LOC100044185	XM_001471875.1	XM_001471875.1		100044185	149269014	XM_001471875.1	LOC100044185	XP_001471925.1	ILMN_2656311	001440619	S	445	GCTTGGATACTTGTTCTGATGCTTATTTTTCCACATTGTATCTTCGTGAC					PREDICTED: Mus musculus hypothetical protein LOC100044185 (LOC100044185), mRNA.					
Mus musculus	RefSeq	ILMN_194971	ILMN_325263	LOC100048770	XM_001481209.1	XM_001481209.1		100048770	149274721	XM_001481209.1	LOC100048770	XP_001481259.1	ILMN_1219602	004670091	S	21	TCTCTTCCTCTTGTCAGGATCTGCAGGTGTCCACTCTGAGGTCCAGCTGC					PREDICTED: Mus musculus similar to Ig H-chain V-JH1-region (LOC100048770), mRNA.					
Mus musculus	RefSeq	ILMN_228757	ILMN_228757	PIK3R6	NM_001004435.2	NM_001004435.2		104709	126362962	NM_001004435.2	Pik3r6	NP_001004435.1	ILMN_3160107	003850451	A	2900	CCCTAGGGAGTCCTGAGAACTGGTGTCAGTTAGCTGCAGGTATAGCTGGT	11	+	68365875-68365924	11qB3	Mus musculus phosphoinositide-3-kinase, regulatory subunit 6 (Pik3r6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			p87PIKAP; p84; Pik3r6; p87(PIKAP)	p87PIKAP; p84; Pik3r6; p87(PIKAP)
Mus musculus	RefSeq	ILMN_228757	ILMN_228757	PIK3R6	NM_001004435.2	NM_001004435.2		104709	126362962	NM_001004435.2	Pik3r6	NP_001004435.1	ILMN_3160361	005080731	S	2937	AGGTATAGCTGGTGGTTCAGCGGTAGAGCACTTGCCTAGTGTGTGGGAGG	11	+	68365912-68365961	11qB3	Mus musculus phosphoinositide-3-kinase, regulatory subunit 6 (Pik3r6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			p87PIKAP; p84; Pik3r6; p87(PIKAP)	p87PIKAP; p84; Pik3r6; p87(PIKAP)
Mus musculus	MEEBO	ILMN_196123	ILMN_196123	SARS1	scl21649.13_184				33468930	NM_011319	Sars1		ILMN_2521845	005220670	S	4	GCCAAACCAGAGGAGAACAAAAAAATGGGAGTCTTCCCATGCTTCATACA										
Mus musculus	Riken	ILMN_205106	ILMN_205106	KCNJ5	ri|D830027N20|PX00200A11|AK052891|2441					AK052891	Kcnj5		ILMN_2570036	005130184	S	2181	GGAGGCAAGAAGCTAAGGCAGCCTAGAGAATGGCTTCCCAACCTCAGGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA];  [goid 15467] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196407	ILMN_236103	CENPL	NM_027429.2	NM_027429.2		70454	142354931	NM_027429.2	Cenpl	NP_081705.1	ILMN_2676726	006100494	S	4159	GCTTGTGTATCCAGCATATCACTGTGGCTGTGTCCTGTTATAAAAGATGC	1	+	163016355-163016404	1qH2.1	Mus musculus centromere protein L (Cenpl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]			2610300B10Rik; AW550697; AW121806	2610300B10Rik; AW550697; AW121806
Mus musculus	RefSeq	ILMN_220313	ILMN_319590	LOC100043761	XR_034901.1	XR_034901.1		100043761	149250148	XR_034901.1	LOC100043761		ILMN_1250281	001660600	S	3128	CATGAAAATAATCATACAAAGGAGATCAAGGGGATACAAGGCATGATTCT	2	-	174954200-174954249	2qH4	PREDICTED: Mus musculus similar to novel KRAB box and zinc finger, C2H2 type domain containing protein (LOC100043761), misc RNA.					
Mus musculus	MEEBO	ILMN_221201	ILMN_221201	C630028M04RIK	scl24331.4.1_50				51709189	XM_489044	C630028M04Rik		ILMN_2732371	007150095	S	3056	TGGATCTGTGTTTTGCCTTCTGCCCCTATATGTTTTATTGCAAAGAGAGG										
Mus musculus	MEEBO	ILMN_210320	ILMN_210320	4933436C20RIK	scl34496.8.1_4				51764256	XM_486143	4933436C20Rik		ILMN_2604403	004810670	S	956	ACCATTTGGATAAGTGATGGCAGCAAGCTTCGCCACTGTAAAGTCACCTC										
Mus musculus	RefSeq	ILMN_216973	ILMN_216973	CLIC5	NM_172621.2	NM_172621.2		224796	85662398	NM_172621.2	Clic5	NP_766209.1	ILMN_2677634	005570411	S	3090	CTTCCTAGAATTTACAAGCAGGCAGGGTGAACTCACGCAGCTCACACCCC	17	+	44414337-44414386	17qB3	Mus musculus chloride intracellular channel 5 (Clic5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; An actin-based, cross-linked cellular protrusion on the apical surface of auditory and vestibular hair cells. Stereocilium bundles act as mechanosensory organelles by responding to fluid motion or fluid pressure changes [goid 32421] [evidence ISO]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]	B330005L24; 5730531E12Rik; jbg	B330005L24; 5730531E12Rik; jbg
Mus musculus	MEEBO	ILMN_222913	ILMN_222913	1700034J05RIK	scl28196.4_442	XM_355831.1			38085467	XM_355831.1	1700034J05Rik		ILMN_1254230	004040121	S	2811	GCCCGTCTTCAGCAGAGTGGGTGCAAAAGCCCTTGGATAAATTCCCTGAA										
Mus musculus	RefSeq	ILMN_223536	ILMN_251547	BC028663	XM_912305.2	XM_912305.2		234365	94383537	XM_912305.2	BC028663	XP_917398.1	ILMN_1234577	005220156	S	322	GCCGACGCGCTGCACCGTGACCTGACCACGCAGTGCGAGAAGATGGACAT				8qB3.3	PREDICTED: Mus musculus cDNA sequence BC028663 (BC028663), mRNA.					
Mus musculus	MEEBO	ILMN_189701	ILMN_189701	MTAP7	scl39104.23_0				6678947	NM_008635	Mtap7		ILMN_2463616	000070221	S	14	AAAACATCAGTTTGTGGGGTTTCCCTATTTGGTTGTCCTTATACATCTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis [goid 33327] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IPI]; The process whose specific outcome is the progression of a Sertoli cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a Sertoli cell fate [goid 60009] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nucleus [goid 6997] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_214473	ILMN_214473	ALDOB	NM_144903.2	NM_144903.2		230163	31981737	NM_144903.2	Aldob	NP_659152.1	ILMN_1224012	007400133	S	1445	TTAATAAACATAGTTACCAGGGGTTGGTTATAGAAGAGGCACAGCAACAG	4	-	49549325-49549374	4qB1	Mus musculus aldolase B, fructose-bisphosphate (Aldob), mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate [goid 4332] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	BC016435; Aldo2; Aldo-2; MGC36398	BC016435; Aldo2; Aldo-2; MGC36398
Mus musculus	RefSeq	ILMN_214473	ILMN_214473	ALDOB	NM_144903.2	NM_144903.2		230163	31981737	NM_144903.2	Aldob	NP_659152.1	ILMN_2840533	000150722	S	1618	CAGCCCCAGATGCTCACTACAGTCAAGTGGCTGATGGCTCCCTTTAGCTG	4	-	49549152-49549201	4qB1	Mus musculus aldolase B, fructose-bisphosphate (Aldob), mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate [goid 4332] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	BC016435; Aldo2; Aldo-2; MGC36398	BC016435; Aldo2; Aldo-2; MGC36398
Mus musculus	RefSeq	ILMN_210201	ILMN_210201	SYBL1	NM_011515.3	NM_011515.3		20955	146134369	NM_011515.3	Sybl1	NP_035645.1	ILMN_1225230	002450524	S	1427	CTGCACATAGTTTAATACCTTCTGTTTATCCATTACCAAGTTGAACTGAG					Mus musculus synaptobrevin like 1 (Sybl1), mRNA.				TI-VAMP; VAMP-7	TI-VAMP; VAMP-7
Mus musculus	RefSeq	ILMN_214665	ILMN_214665	HUS1	NM_008316.2	NM_008316.2		15574	31982268	NM_008316.2	Hus1	NP_032342.1	ILMN_2897858	000620092	S	4158	CATTGATGGTAGGAGGGGTGTTAGTACCAATGTCCTGAAGGTCACTTGGC	11	-	8893518-8893567	11qA1	Mus musculus Hus1 homolog (S. pombe) (Hus1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any cell cycle checkpoint that blocks entry into S phase [goid 31575] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	mHus1	mHus1
Mus musculus	RefSeq	ILMN_214665	ILMN_214665	HUS1	NM_008316.2	NM_008316.2		15574	31982268	NM_008316.2	Hus1	NP_032342.1	ILMN_2650547	001570079	S	4426	GTGGGATGTTGGTGTCCATGGTGTGACATTAAAGACCAGGAAGCCTGGGT	11	-	8893250-8893299	11qA1	Mus musculus Hus1 homolog (S. pombe) (Hus1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any cell cycle checkpoint that blocks entry into S phase [goid 31575] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	mHus1	mHus1
Mus musculus	RefSeq	ILMN_198424	ILMN_239540	CACNA2D4	NM_001033382.2	NM_001033382.2		319734	124517717	NM_001033382.2	Cacna2d4	NP_001028554.2	ILMN_1228480	004280746	S	3785	TGATCCGAGGAGTTCTGGAGGCTGGAATTGAGCGGCGAGGCCCATGTAGA	6	+	119300407-119300456	6qF1	Mus musculus calcium channel, voltage-dependent, alpha 2/delta subunit 4 (Cacna2d4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	BE686333; 5730412N02Rik	BE686333; 5730412N02Rik
Mus musculus	RefSeq	ILMN_191670	ILMN_191670	TNNI2	NM_009405.2	NM_009405.2		21953	118130404	NM_009405.2	Tnni2	NP_033431.1	ILMN_2481133	002260066	S	531	GGCATGGAGGGCCGGAAGAAAATGTTCGAGTCTGAGTCCTAACTGCCCAC	7	+	149630174-149630215:149630216-149630223	7qF5	Mus musculus troponin I, skeletal, fast 2 (Tnni2), mRNA.			Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219492	ILMN_219492	SSX2IP	NM_138744.2	NM_138744.2		99167	118129983	NM_138744.2	Ssx2ip	NP_620083.1	ILMN_2793442	006660452	S	3074	GCATTGACTTTTATAACCGAGACATGGCACTCTGGGCACTGTGTCGTCTC	3	+	146102781-146102830	3qH2	Mus musculus synovial sarcoma, X breakpoint 2 interacting protein (Ssx2ip), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Adip; AU014939; AU042321	Adip; AU014939; AU042321
Mus musculus	RefSeq	ILMN_224014	ILMN_324927	EPB4.1L4B	XM_001476174.1	XM_001476174.1		54357	149252410	XM_001476174.1	Epb4.1l4b	XP_001476224.1	ILMN_2773215	004540717	S	3080	CAAGTAGCACCTCTCTAACCTCGTTACGTCTTCGTAGGCAGTCCCAGGGT	4	-	57074926-57074975	4qB3	PREDICTED: Mus musculus erythrocyte protein band 4.1-like 4b, transcript variant 2 (Epb4.1l4b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224014	ILMN_324927	EPB4.1L4B	XM_001476174.1	XM_001476174.1		54357	149252410	XM_001476174.1	Epb4.1l4b	XP_001476224.1	ILMN_2775064	001570026	S	3093	TCTAACCTCGTTACGTCTTCGTAGGCAGTCCCAGGGTGCTCTTCTGTTTG	4	-	57074913-57074962	4qB3	PREDICTED: Mus musculus erythrocyte protein band 4.1-like 4b, transcript variant 2 (Epb4.1l4b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217214	ILMN_217214	RNF44	NM_134064.1	NM_134064.1		105239	19527279	NM_134064.1	Rnf44	NP_598825.1	ILMN_2680406	004250370	S	3393	TTGGGGGCCCTGTTCCTTGCACATCTTACAGTTACCTCATTTTTCCCATG	13	-	54781051-54781100	13qB1	Mus musculus ring finger protein 44 (Rnf44), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI854545; mKIAA1100	AI854545; mKIAA1100
Mus musculus	Riken	ILMN_201772	ILMN_201772	2310021J05RIK	ri|2310021J05|ZX00052M23|AK009445|1039					AK009445	2310021J05Rik		ILMN_1224900	002140333	S	970	AGGCATTGCTGGGAGGGACATGGGAAGGGGATGTAGCCCCAACCTGGAAA										
Mus musculus	RefSeq	ILMN_244646	ILMN_244646	BC027231	NM_145972.1	NM_145972.1		212547	22122410	NM_145972.1	BC027231	NP_666084.1	ILMN_2913269	006520154	S	2583	GCATAGCATCATGTGTTTACCCATGGGCTGAGCCATCTCCTGCCCAGGTC	16	+	44656331-44656380	16qB4	Mus musculus cDNA sequence BC027231 (BC027231), mRNA.				MGC27931	MGC27931
Mus musculus	RefSeq	ILMN_190817	ILMN_244014	PIK3R1	NM_001024955.1	NM_001024955.1		18708	68299808	NM_001024955.1	Pik3r1	NP_001020126.1	ILMN_2473531	003060471	S	5437	AGAATTGGCTCCATTGGAAAGACTCTCCTGCTTCATACCGAGCTTGTCGC	13	-	102451072-102451121	13qD1	Mus musculus phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha) (Pik3r1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IGI]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]; Interacting selectively with any of the insulin receptor substrate (IRS) proteins, adaptor proteins that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex [goid 43560] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence TAS]	p55alpha; AA414921; PI3K; p50alpha; p85alpha; C530050K14	p55alpha; AA414921; PI3K; p50alpha; p85alpha; C530050K14
Mus musculus	RefSeq	ILMN_197387	ILMN_327253	LOC544917	XR_035580.1	XR_035580.1		544917	149254902	XR_035580.1	LOC544917		ILMN_1256236	002190703	S	493	GGCGTTCATTTGCCCACCTAAGGCCAGATCCTTCATGAGTGGTGACTGTT				13qA1	PREDICTED: Mus musculus hypothetical LOC544917 (LOC544917), misc RNA.					
Mus musculus	RefSeq	ILMN_219453	ILMN_219453	SPC25	NM_025565.2	NM_025565.2		66442	142387311	NM_025565.2	Spc25	NP_079841.1	ILMN_1255960	002000270	S	437	CTAGTATTGACCCTAAGAATCCTGAGAGCCCATATATGTTTTCCATGAGC	2	-	69035216-69035265	2qC2	Mus musculus SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) (Spc25), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		2610205L13Rik; Spbc25; 2600017H08Rik	2610205L13Rik; Spbc25; 2600017H08Rik
Mus musculus	Riken	ILMN_201743	ILMN_201743	2610037M15RIK	ri|2610037M15|ZX00045K06|AK011715|788					AK011715	2610037M15Rik		ILMN_1216745	002260224	S	694	GGGAACACCCAGCCTCTCAGAAAATTGACGTGCTCCCAGTTGACTTGTGG										
Mus musculus	RefSeq	ILMN_219946	ILMN_315638	LOC100046207	XM_001475801.1	XM_001475801.1		100046207	149266962	XM_001475801.1	LOC100046207	XP_001475851.1	ILMN_1253982	000620239	S	408	AAAAGTCGACGTGGACTGCTGCGAGAAAGATTTGTGCAACGGGGCATCGG					PREDICTED: Mus musculus similar to Lymphocyte antigen 6H precursor (Ly-6H) (LOC100046207), mRNA.					
Mus musculus	RefSeq	ILMN_219946	ILMN_315638	LOC100046207	XM_001475801.1	XM_001475801.1		100046207	149266962	XM_001475801.1	LOC100046207	XP_001475851.1	ILMN_2748897	001400746	S	384	GGGGTTCATTAACTCTGGGATCTTAAAAGTCGACGTGGACTGCTGCGAGA					PREDICTED: Mus musculus similar to Lymphocyte antigen 6H precursor (Ly-6H) (LOC100046207), mRNA.					
Mus musculus	RefSeq	ILMN_219946	ILMN_315638	LOC100046207	XM_001475801.1	XM_001475801.1		100046207	149266962	XM_001475801.1	LOC100046207	XP_001475851.1	ILMN_1241465	002070142	S	221	ATTCCAGCCATTGCGCTCCGAAGCAGTGCCAGCCCACCGATACCGTTTGT					PREDICTED: Mus musculus similar to Lymphocyte antigen 6H precursor (Ly-6H) (LOC100046207), mRNA.					
Mus musculus	Riken	ILMN_203784	ILMN_203784	A230055P19RIK	ri|A230055P19|PX00128O09|AK038700|1007					AK038700	A230055P19Rik		ILMN_2559954	001260360	S	156	ACTTCACTTAGCATGATGATCTCTAGCTCTGTTCAGTGTCCTGCCAAGAC										
Mus musculus	MEEBO	ILMN_210128	ILMN_210128	CDH23	scl0003848.1_15	NM_023370.1			13399315	NM_023370.1	Cdh23		ILMN_1252019	006520328	S	9828	AAGGGGCAAGATGGAATCCACATGGTTCATGGCAGCACGGGCACACTGCT						A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IDA]; The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence ISS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IMP]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_193263	ILMN_252319	RELN	NM_011261.2	NM_011261.2		19699	117320553	NM_011261.2	Reln	NP_035391.2	ILMN_2704257	007610484	S	11535	GGGTTGTTTCCTTGTGGGTCATAGTCATACCTTCTGATGAGGTGGAGCCA	5	-	21390389-21390438	5qA3	Mus musculus reelin (Reln), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the spinal cord [goid 21511] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration [goid 21800] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of small GTPase mediated signal transduction [goid 51057] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine/tyrosine = ADP + protein serine/threonine/tyrosine phosphate [goid 4712] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	reeler; rl	reeler; rl
Mus musculus	RefSeq	ILMN_223375	ILMN_223375	EVI2B	NM_146023.3	NM_146023.3		216984	117320525	NM_146023.3	Evi2b	NP_666135.1	ILMN_3125939	006290475	A	3621	TGTTTGTGTTCTGAGACAGGAGTCCTCTGGTAGCCCTGGCTGTCCTGGCA	11	-	79327160-79327209	11qB5	Mus musculus ecotropic viral integration site 2b (Evi2b), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Evi-2; MGC28913; Evi2	Evi-2; MGC28913; Evi2
Mus musculus	RefSeq	ILMN_223375	ILMN_223375	EVI2B	NM_146023.3	NM_146023.3		216984	117320525	NM_146023.3	Evi2b	NP_666135.1	ILMN_3049896	005340474	I	374	CAGAATGGCTCCAGCAGACATCCGAGTGACAATAACACAAACCTTGTCAC	11	-	79341102-79341151	11qB5	Mus musculus ecotropic viral integration site 2b (Evi2b), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Evi-2; MGC28913; Evi2	Evi-2; MGC28913; Evi2
Mus musculus	Riken	ILMN_206264	ILMN_206264	D030050C19RIK	ri|D030050C19|PX00180E18|AK083587|2896					AK083587	D030050C19Rik		ILMN_1251606	000070022	S	2675	ACGCACTGCAGAGGAGAGCAGTGTTTTTCAAGGCAAAGAGTAGCTGGTAG										
Mus musculus	RefSeq	ILMN_197143	ILMN_197143	LOC381343	XM_355306.1	XM_355306.1			38074282	XM_355306.1	LOC381343		ILMN_1227385	005700139	S	4050	CCCTTCTGCTGTTGGGAATATGGGCTTCCAGTCTAGGGCCACAGTGGATG										
Mus musculus	Riken	ILMN_204859	ILMN_204859	A130064M08RIK	ri|A130064M08|PX00124K12|AK037929|1761					AK037929	A130064M08Rik		ILMN_1216700	001450019	S	1144	TCGGTGGCACTAAAGCGACCTGAAGGAATCCCAAGATGCATTGCAGGCTT										
Mus musculus	RefSeq	ILMN_184370	ILMN_245554	NCAM1	NM_010875.3	NM_010875.3		17967	124517682	NM_010875.3	Ncam1	NP_035005.2	ILMN_2722864	003390731	S	2472	CCTTGGTCTCATTGCTTTTCTCTGCGGTGACTCTTCTTCTGCTCTGATAG	9	-	49325607-49325610:49325611-49325656	9qA5.3	Mus musculus neural cell adhesion molecule 1 (Ncam1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The attachment of a cell to a second cell of the identical type via adhesion molecules [goid 34109] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	CD56; NCAM-140; NCAM-1; NCAM-180; Ncam; NCAM-120; E-NCAM	CD56; NCAM-140; NCAM-1; NCAM-180; Ncam; NCAM-120; E-NCAM
Mus musculus	Riken	ILMN_206087	ILMN_206087	8030466K23RIK	ri|8030466K23|PX00315P05|AK033216|1456					AK033216	8030466K23Rik		ILMN_1229918	002140379	S	1112	GGCATTCAGTGGTGTAAAAAGTTAGGGCGTGGGCGGGAGAGGTGGCACAG										
Mus musculus	RefSeq	ILMN_184299	ILMN_261894	ENTPD1	NM_009848.3	NM_009848.3		12495	110665730	NM_009848.3	Entpd1	NP_033978.1	ILMN_2659560	001850458	S	3887	GGTGGAACATGTCAAATAAAATGAGCCACTACTTTCAATGTTGGGTTGCC	19	+	40815782-40815831	19qC3	Mus musculus ectonucleoside triphosphate diphosphohydrolase 1 (Entpd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside diphosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with diphosphate on its glycose moiety [goid 9181] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6200] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IDA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IDA]	NTPDase-1; AA408691; 2610206B08Rik; Cd39	NTPDase-1; AA408691; 2610206B08Rik; Cd39
Mus musculus	RefSeq	ILMN_259110	ILMN_259110	NACC2	NM_001037098.1	NM_001037098.1		67991	80861476	NM_001037098.1	Nacc2	NP_001032175.1	ILMN_3153982	006620255	A	6734	CACAGCTATGTCCGCAAGCCGACCAGGGAAACCCTAGAGCTTTGAGCCTG	2	-	25911165-25911214	2qA3	Mus musculus nucleus accumbens associated 2, BEN and BTB (POZ) domain containing (Nacc2), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	0610020I02Rik; AI448087; C030048H19Rik	0610020I02Rik; AI448087; C030048H19Rik
Mus musculus	Riken	ILMN_204877	ILMN_204877	SEC8	ri|A430039L15|PX00135A24|AK039983|3688					AK039983	Sec8		ILMN_1229107	007380451	S	3145	CTTCTGTGTCAGAATGCAGGGATTAAAGACATGAACCACCACACCCAGGC										
Mus musculus	RefSeq	ILMN_192831	ILMN_257998	CRTC1	NM_001004062.2	NM_001004062.2		382056	118131085	NM_001004062.2	Crtc1	NP_001004062.1	ILMN_1215149	007040379	S	1789	CCACTGGACGAGCTGAAGATTGACCCTCTGACCCTGGACGGACTCCATAT	8	-	72910092-72910141	8qB3.3	Mus musculus CREB regulated transcription coactivator 1 (Crtc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		mKIAA0616; AI413414; TORC1; Mect1; R74955; MGC90786	mKIAA0616; AI413414; TORC1; Mect1; R74955; MGC90786
Mus musculus	RefSeq	ILMN_217231	ILMN_257998	CRTC1	NM_001004062.2	NM_001004062.2		382056	118131085	NM_001004062.2	Crtc1	NP_001004062.1	ILMN_2680618	005290025	S	5399	CTCACCCCTTAGTTGGAAAAAGGACGCCATGGGCTGGGGTGCCCCTTTGA	8	-	72906482-72906531	8qB3.3	Mus musculus CREB regulated transcription coactivator 1 (Crtc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		mKIAA0616; AI413414; TORC1; Mect1; R74955; MGC90786	mKIAA0616; AI413414; TORC1; Mect1; R74955; MGC90786
Mus musculus	RefSeq	ILMN_215654	ILMN_215654	OLFR993	NM_146435.1	NM_146435.1		258427	27544950	NM_146435.1	Olfr993	NP_666646.1	ILMN_1250193	007210092	S	591	GATTCTTGTTATCTTTGTTGGATTTAACCTGATATTCACTGTGCTGGTTG	2	-	85254394-85254443	2qD	Mus musculus olfactory receptor 993 (Olfr993), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR203-2	MOR203-2
Mus musculus	RefSeq	ILMN_210408	ILMN_210408	1700034F02RIK	XM_125968.3	XM_125968.3		73324	94389925	XM_125968.3	1700034F02Rik	XP_125968.1	ILMN_2605342	003170470	S	1792	GCTGTACTCCATATGTTTTCTGTGGATATGAAAAAAGTTGGCATGAGGCT	11	+	29475446-29475495	11qA3.3	PREDICTED: Mus musculus RIKEN cDNA 1700034F02 gene, transcript variant 1 (1700034F02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216682	ILMN_216682	HBQ1	NM_175000.2	NM_175000.2		216635	141803511	NM_175000.2	Hbq1	NP_778165.1	ILMN_2673980	006980739	S	432	GACACGTGTCTGGGTCATGTGACTTTTGCACTGGACTTCAAGTAATGCTG	11	+	32200396-32200445	11qA4	Mus musculus hemoglobin, theta 1 (Hbq1), mRNA.		The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]	RP23-375M9.6; A230090E05Rik; Gm876	RP23-375M9.6; A230090E05Rik; Gm876
Mus musculus	MEEBO	ILMN_210826	ILMN_210826	LOC384410	IGKV4-92_AJ231226_Ig_kappa_variable_4-92_261	XM_357628.1			38084317	XM_357628.1	LOC384410		ILMN_2609600	003390709	S	268	GCTCTTACACTCTGACAATCAGCTGCATGCAGGACGAAGTTGCTGCCACT										
Mus musculus	RefSeq	ILMN_208809	ILMN_208809	FANCL	NM_025923.2	NM_025923.2		67030	31981126	NM_025923.2	Fancl	NP_080199.1	ILMN_1247125	006620240	S	425	GCAAGAGTTGTGTGTACAACCACCTTCTTGCAGTTTCTGCAAAGACCTTC	11	+	26307568-26307617	11qA3.3	Mus musculus Fanconi anemia, complementation group L (Fancl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IPI]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AW554273; 2010322C19Rik; B230118H11Rik; gcd; Pog; Phf9	AW554273; 2010322C19Rik; B230118H11Rik; gcd; Pog; Phf9
Mus musculus	RefSeq	ILMN_208809	ILMN_208809	FANCL	NM_025923.2	NM_025923.2		67030	31981126	NM_025923.2	Fancl	NP_080199.1	ILMN_2740285	006480259	S	1241	GTCTGGGAGAAAACCTTGAATGGAACCTACCTGTGAAGAGATGGAATGCT	11	+	26371342-26371360:26371361-26371391	11qA3.3	Mus musculus Fanconi anemia, complementation group L (Fancl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IPI]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AW554273; 2010322C19Rik; B230118H11Rik; gcd; Pog; Phf9	AW554273; 2010322C19Rik; B230118H11Rik; gcd; Pog; Phf9
Mus musculus	RefSeq	ILMN_189288	ILMN_208809	FANCL	NM_025923.2	NM_025923.2		67030	31981126	NM_025923.2	Fancl	NP_080199.1	ILMN_2459979	002750685	S	1612	CCAGCTATATGAGTTTCCAAGGTTCATATTGCAAGCCCTATCTGGACTGC	11	+	26371713-26371762	11qA3.3	Mus musculus Fanconi anemia, complementation group L (Fancl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IPI]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AW554273; 2010322C19Rik; B230118H11Rik; gcd; Pog; Phf9	AW554273; 2010322C19Rik; B230118H11Rik; gcd; Pog; Phf9
Mus musculus	RefSeq	ILMN_189288	ILMN_208809	FANCL	NM_025923.2	NM_025923.2		67030	31981126	NM_025923.2	Fancl	NP_080199.1	ILMN_1255562	003870332	S	1459	GGCCTGCAATTTTTCAGTTGACTCTGAGTGAAGAGACAAAGGCAGATGTG	11	+	26371560-26371609	11qA3.3	Mus musculus Fanconi anemia, complementation group L (Fancl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IPI]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AW554273; 2010322C19Rik; B230118H11Rik; gcd; Pog; Phf9	AW554273; 2010322C19Rik; B230118H11Rik; gcd; Pog; Phf9
Mus musculus	Riken	ILMN_205631	ILMN_205631	1200008A14RIK	ri|5830406N04|PX00038B19|AK030800|3703					AK030800	1200008A14Rik		ILMN_2574051	002480220	S	3028	AGGTTCAACAAGTTGAAGACGAAATGCGAGGACTTCTGGACGAAACATGC										
Mus musculus	RefSeq	ILMN_200339	ILMN_200339	LOC386264	XM_359147.1	XM_359147.1			38081350	XM_359147.1	LOC386264		ILMN_1229581	001580669	S	156	TGTAGTAGAAGGAAAAGTGGGGAAGAGGCTCAAGCACACGGGTACAGGGG										
Mus musculus	MEEBO	ILMN_184139	ILMN_184139	BC030046	scl0277154.1_102				51768450	XM_147850	BC030046		ILMN_2757940	001010364	S	4176	ATCTACCGAACCTCTTATCGGGGCTCTCTGTTTGCTGTGACAGTGGACAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223745	ILMN_223745	CDK5R1	NM_009871.2	NM_009871.2		12569	40254597	NM_009871.2	Cdk5r1	NP_034001.1	ILMN_1259339	007210458	S	4032	ATCTGATGAGTCATGAAGCTCAGTTTGGCTGTAATTTAATTCCCCTTCCC	11	+	80294579-80294628	11qB5	Mus musculus cyclin-dependent kinase 5, regulatory subunit 1 (p35) (Cdk5r1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that activates cyclin-dependent kinase 5; composed of regulatory and catalytic subunits [goid 16533] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IDA]; The attachment of a neuron to another cell via adhesion molecules [goid 7158] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 16534] [evidence TAS]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence TAS]	Cdk5r; p35; p25; D11Bwg0379e	Cdk5r; p35; p25; D11Bwg0379e
Mus musculus	RefSeq	ILMN_187678	ILMN_187678	VPS29	NM_019780.1	NM_019780.1		56433	9790284	NM_019780.1	Vps29	NP_062754.1	ILMN_2955883	003830291	S	504	CATCGTTTGTGCTGATGGACATCCAGGCTTCTACTGTGGTCACTTACGTC	5	+	122812825-122812874	5qF	Mus musculus vacuolar protein sorting 29 (S. pombe) (Vps29), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances from the Golgi to the vacuole [goid 6896] [evidence ISS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate [goid 4647] [evidence IEA]	PEP11; AW049835; 2010015D08Rik	PEP11; AW049835; 2010015D08Rik
Mus musculus	RefSeq	ILMN_187678	ILMN_187678	VPS29	NM_019780.1	NM_019780.1		56433	9790284	NM_019780.1	Vps29	NP_062754.1	ILMN_2495644	004180017	S	863	GCCTCCTAGTTGGTATTTGGACTTCATTACAAAACTAGCGCATGAAGAGA	5	+	122813184-122813233	5qF	Mus musculus vacuolar protein sorting 29 (S. pombe) (Vps29), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances from the Golgi to the vacuole [goid 6896] [evidence ISS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate [goid 4647] [evidence IEA]	PEP11; AW049835; 2010015D08Rik	PEP11; AW049835; 2010015D08Rik
Mus musculus	RefSeq	ILMN_187678	ILMN_187678	VPS29	NM_019780.1	NM_019780.1		56433	9790284	NM_019780.1	Vps29	NP_062754.1	ILMN_2446175	001570020	S	313	GATCCACGGACACCAAGTTATTCCGTGGGGAGACATGGCTAGCTTAGCCC	5	+	122812101-122812150	5qF	Mus musculus vacuolar protein sorting 29 (S. pombe) (Vps29), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances from the Golgi to the vacuole [goid 6896] [evidence ISS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate [goid 4647] [evidence IEA]	PEP11; AW049835; 2010015D08Rik	PEP11; AW049835; 2010015D08Rik
Mus musculus	RefSeq	ILMN_220815	ILMN_220815	SWAP70	NM_009302.2	NM_009302.2		20947	40789274	NM_009302.2	Swap70	NP_033328.2	ILMN_2765524	004730392	S	3679	TTCACTGTAATCAGCCCTTTCCTCCAACGAGAGATGAGATTATTTGCAGG	7	+	117426722-117426771	7qF1	Mus musculus SWA-70 protein (Swap70), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Recombination occurring within or between DNA molecules in somatic cells [goid 16444] [evidence IDA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]	AV235546; 70kDa	AV235546; 70kDa
Mus musculus	RefSeq	ILMN_220815	ILMN_220815	SWAP70	NM_009302.2	NM_009302.2		20947	40789274	NM_009302.2	Swap70	NP_033328.2	ILMN_2727273	001990041	S	2692	TATAAACAGGAAGGTGACCCATGTGGCACAGAAGAGGTGGGACTCAGTAG	7	+	117425735-117425784	7qF1	Mus musculus SWA-70 protein (Swap70), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Recombination occurring within or between DNA molecules in somatic cells [goid 16444] [evidence IDA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]	AV235546; 70kDa	AV235546; 70kDa
Mus musculus	RefSeq	ILMN_220815	ILMN_220815	SWAP70	NM_009302.2	NM_009302.2		20947	40789274	NM_009302.2	Swap70	NP_033328.2	ILMN_2752989	003180630	S	1523	AAGGAGCAGGCATTGCAGGAGGCCATGGCACAGCTGGAACAGTTGGAGTT	7	+	117422811-117422860	7qF1	Mus musculus SWA-70 protein (Swap70), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Recombination occurring within or between DNA molecules in somatic cells [goid 16444] [evidence IDA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]	AV235546; 70kDa	AV235546; 70kDa
Mus musculus	RefSeq	ILMN_220815	ILMN_220815	SWAP70	NM_009302.2	NM_009302.2		20947	40789274	NM_009302.2	Swap70	NP_033328.2	ILMN_2903364	003310132	S	3621	AGACCGTGCCTCATCTCTGTAATAACTACAGGAAACGTTGGGAGTGTCTG	7	+	117426664-117426713	7qF1	Mus musculus SWA-70 protein (Swap70), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Recombination occurring within or between DNA molecules in somatic cells [goid 16444] [evidence IDA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]	AV235546; 70kDa	AV235546; 70kDa
Mus musculus	RefSeq	ILMN_214248	ILMN_214248	1700022C21RIK	NM_029602.1	NM_029602.1		76416	22095008	NM_029602.1	1700022C21Rik	NP_083878.1	ILMN_2645917	006280270	S	496	TAGAACAAGCCATGCCAGAGAATTTACAGACAAACCCTGGAGACAGCCAC	17	+	37101900-37101949	17qB1	Mus musculus RIKEN cDNA 1700022C21 gene (1700022C21Rik), mRNA.				AI746295	AI746295
Mus musculus	RefSeq	ILMN_185648	ILMN_215079	PGM3	NM_028352.3	NM_028352.3		109785	142369764	NM_028352.3	Pgm3	NP_082628.2	ILMN_1214082	002510608	S	1934	CAGAGGTAAGCTTCATTCCCAAGTCTAAGATTTTGAGCTTCTAAACATTT	9	-	86448666-86448715	9qE3.1	Mus musculus phosphoglucomutase 3 (Pgm3), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose 1-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-1 [goid 19255] [evidence IDA]; The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 6048] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IEA]; Catalysis of the reaction: N-acetyl-D-glucosamine 1-phosphate = N-acetyl-D-glucosamine 6-phosphate [goid 4610] [evidence IMP]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence IDA]	C77933; BB187688; PAGM; Pgm-3; 2810473H05Rik	C77933; BB187688; PAGM; Pgm-3; 2810473H05Rik
Mus musculus	RefSeq	ILMN_215079	ILMN_215079	PGM3	NM_028352.3	NM_028352.3		109785	142369764	NM_028352.3	Pgm3	NP_082628.2	ILMN_1249694	004050102	S	4401	CTCAGCAGTGTTTCTAAAACTACAGGGAGCAGCAGTAGGGTGGATATGCA	9	-	86446199-86446248	9qE3.1	Mus musculus phosphoglucomutase 3 (Pgm3), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose 1-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-1 [goid 19255] [evidence IDA]; The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 6048] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IEA]; Catalysis of the reaction: N-acetyl-D-glucosamine 1-phosphate = N-acetyl-D-glucosamine 6-phosphate [goid 4610] [evidence IMP]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence IDA]	C77933; BB187688; PAGM; Pgm-3; 2810473H05Rik	C77933; BB187688; PAGM; Pgm-3; 2810473H05Rik
Mus musculus	MEEBO	ILMN_222453	ILMN_222453	4932407I05	scl0224662.1_58	NM_183159.1			34147186	NM_183159.1	4932407I05		ILMN_2749777	000150195	S	3424	GGATGTGGGACTGGCTGGGTGAGCAAGGTGATTCACGGATAATGCCTGGT										
Mus musculus	Riken	ILMN_203896	ILMN_203896	C630044O20RIK	ri|C630044O20|PX00085O03|AK049999|2987					AK049999	C630044O20Rik		ILMN_2560804	004200372	S	2397	GCGGTTTAAACAGAGGCTGAAGGTGATCCAGTCCTTGGAAGACACGGCTA										
Mus musculus	RefSeq	ILMN_211809	ILMN_211809	BC049635	NM_177785.2	NM_177785.2		277773	31343029	NM_177785.2	BC049635	NP_808453.1	ILMN_3125842	007510703	A	1580	GGGTAAAGGGACTTGAGTGGAGAATGGAGGCCTCTTGTTTAAGGTCCACC	4	-	42889129-42889178	4qA5	Mus musculus cDNA sequence BC049635 (BC049635), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4931430D02; MGC58387	4931430D02; MGC58387
Mus musculus	RefSeq	ILMN_223586	ILMN_223586	MFSD7	NM_172883.1	NM_172883.1		243197	27370345	NM_172883.1	Mfsd7	NP_766471.1	ILMN_2877581	005090026	S	2460	TGGTGGGAGTGGCAAATAAATGGTACAGACATGCTGGAAACCTAGACCTC				5qF	Mus musculus major facilitator superfamily domain containing 7 (Mfsd7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	4732482E20Rik	4732482E20Rik
Mus musculus	RefSeq	ILMN_190304	ILMN_190304	ZFP93	NM_009567.4	NM_009567.4		22755	122937380	NM_009567.4	Zfp93	NP_033593.1	ILMN_2498609	002260730	S	847	AGGTGTTAACATTCTGGGTTGCATTTCCCACCACGATCACAATATACTGC	7	+	25060150-25060199	7qA3	Mus musculus zinc finger protein 93 (Zfp93), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190304	ILMN_190304	ZFP93	NM_009567.4	NM_009567.4		22755	122937380	NM_009567.4	Zfp93	NP_033593.1	ILMN_1232697	006060142	S	2359	CTTGGCTGATGATTGTTAAAAGTATCCCCAACACGCAGAGTCTTCAGGAG	7	+	25061662-25061711	7qA3	Mus musculus zinc finger protein 93 (Zfp93), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190304	ILMN_190304	ZFP93	NM_009567.4	NM_009567.4		22755	122937380	NM_009567.4	Zfp93	NP_033593.1	ILMN_2487453	001450600	S	656	TCTCAGGCCCCCGAGGATGACGGCTGTCTGGAGAATCTCCCAAGCAATCA	7	+	25059959-25060008	7qA3	Mus musculus zinc finger protein 93 (Zfp93), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221250	ILMN_221250	GPR68	NM_175493.2	NM_175493.2		238377	31342018	NM_175493.2	Gpr68	NP_780702.1	ILMN_2732996	002350440	S	2721	GCCTCCTCATCCCACAGTATTTCCCCTGTTTGACCTGAAATTCTGGATTC	12	-	102115053-102115102	12qE	Mus musculus G protein-coupled receptor 68 (Gpr68), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	OGR1; BB131428	OGR1; BB131428
Mus musculus	RefSeq	ILMN_201034	ILMN_201034	LOC384721	XM_357815.1	XM_357815.1			38088056	XM_357815.1	LOC384721		ILMN_1230097	001770056	S	496	CTTCAAGCTCTGATGGGCTTCCAGGGTACCATTCAGTTCGGCAAAGCTGC										
Mus musculus	RefSeq	ILMN_260708	ILMN_260708	SFRS5	NM_001079695.1	NM_001079695.1		20384	119226246	NM_001079695.1	Sfrs5	NP_001073163.1	ILMN_3148662	004060471	A	927	TCACGAAGGAGCAAGTCTTACAGCCGATCAAGGAGCAGGAGCCGGAGCCG	12	+	82050768-82050817	12qD1	Mus musculus splicing factor, arginine/serine-rich 5 (SRp40, HRS) (Sfrs5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]	MGC96781	MGC96781
Mus musculus	RefSeq	ILMN_214665	ILMN_214665	HUS1	NM_008316.4	NM_008316.4		15574	145966801	NM_008316.4	Hus1	NP_032342.1	ILMN_1229175	001050091	S	4423	CCAGTGGGATGTTGGTGTCCATGGTGTGACATTAAAGACCAGGAAGCCTG				11qA1	Mus musculus Hus1 homolog (S. pombe) (Hus1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any cell cycle checkpoint that blocks entry into S phase [goid 31575] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	mHus1	mHus1
Mus musculus	RefSeq	ILMN_210771	ILMN_210771	ADC	NM_172875.2	NM_172875.2		242669	142344110	NM_172875.2	Adc	NP_766463.1	ILMN_2608997	007000408	S	241	TGTTGCATACTTTCTAAGGCGGTGGCCAAGGCAGCCAGCGGTGCTCCAAG	4	-	128638751-128638800	4qD2.2	Mus musculus arginine decarboxylase (Adc), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups [goid 6596] [evidence IEA]; The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis [goid 6591] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: L-arginine = agmatine + CO2 [goid 8792] [evidence IDA]; Upregulation of the activity of the enzyme ornithine decarboxylase [goid 42978] [evidence IGI]; Catalysis of the reaction: L-ornithine = putrescine + CO2 [goid 4586] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Odcp; RP23-269B7.4; 4933429I20Rik; B930082O19	Odcp; RP23-269B7.4; 4933429I20Rik; B930082O19
Mus musculus	Riken	ILMN_205144	ILMN_205144	ACHE	ri|9830108O13|PX00118M05|AK036443|3688					AK036443	Ache		ILMN_1245963	000610603	S	3417	CTCAGGTGATGCCGGAGAACAAGGCAGGCAGAACAGGGAGTCCTTAAAAG						The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of acetylcholine, the acetic acid ester of the organic base choline [goid 6581] [evidence IDA]; The chemical reactions and pathways resulting in the formation of neurotransmitter receptors [goid 45212] [evidence IMP]; Any process that modulates the frequency, rate, or extent of receptor recyling [goid 1919] [evidence IMP]; The process by which cell surface receptors are monoubiquitinated following ligand-induced activation, and subsequently taken up into endocytic vesicles and targeted to the lysosome or vacuole for degradation; serves as a mechanism to downregulate receptor signaling [goid 31623] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence IDA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]	Catalysis of the reaction: acetylcholine + H2O = choline + acetate [goid 3990] [evidence IDA]; Interacting selectively with laminins, glycoproteins that are major constituents of the basement membrane of cells [goid 43236] [evidence IPI]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion [goid 4104] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216586	ILMN_243387	PDIA2	NM_001081070.1	NM_001081070.1		69191	124486723	NM_001081070.1	Pdia2	NP_001074539.1	ILMN_1215125	004730647	S	1638	GCCATTGGGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGG	17	-	26334406-26334455	17qA3.3	Mus musculus protein disulfide isomerase associated 2 (Pdia2), mRNA.			Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [evidence TAS]	AI661267; 1810041F13Rik; MGC144891; Pdipl; Pdip	AI661267; 1810041F13Rik; MGC144891; Pdipl; Pdip
Mus musculus	RefSeq	ILMN_187589	ILMN_330329	LOC100044376	XR_030576.1	XR_030576.1		100044376	149261515	XR_030576.1	LOC100044376		ILMN_1258587	002060379	S	5451	GGGAAGTGTTGTAGTGGGTCTGAACCCTAGCGACCAGTTCTATGATACTG					PREDICTED: Mus musculus similar to Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 (LOC100044376), misc RNA.					
Mus musculus	RefSeq	ILMN_209024	ILMN_253081	ZFP579	NM_026741.2	NM_026741.2		68490	110832844	NM_026741.2	Zfp579	NP_081017.1	ILMN_1222760	006290598	S	2020	GGGTTCGTCCCAGCCTGCCCATCCCTATTACAAACACTGGACACCATCAC	7	-	4944543-4944592	7qA1	Mus musculus zinc finger protein 579 (Zfp579), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1110003A17Rik	1110003A17Rik
Mus musculus	MEEBO	ILMN_185049	ILMN_185049	1700009P03RIK	scl45183.26_223				47271409	NM_134077	1700009P03Rik		ILMN_2423747	000010678	S	14	GGCATGGGGGTTCCCTGCTCTTTGAGAGGAGCAAAAGTAACTGGTTAAGC										
Mus musculus	MEEBO	ILMN_185049	ILMN_185049	1700009P03RIK	scl45183.26_223				47271409	NM_134077	1700009P03Rik		ILMN_2680799	006060626	S	3585	GTAACACTAGCCACTAGGATAAAAGGTATGGCAGGATAAGAAGGGATAGC										
Mus musculus	MEEBO	ILMN_185049	ILMN_185049	1700009P03RIK	scl45183.26_223				47271409	NM_134077	1700009P03Rik		ILMN_2743487	006020184	S	1934	GTGAAGGACAGGTTGGGTTTTGTATCAAAGCCATCTGTTTCAGCAACTGA										
Mus musculus	RefSeq	ILMN_199570	ILMN_199570	LOC383657	XM_357174.1	XM_357174.1			38074462	XM_357174.1	LOC383657		ILMN_1214297	001240240	S	65	AAGCCAAGACACAGAAGAATGAGGGGGAGCTGGAAGAGGACAAGGCTGGC										
Mus musculus	RefSeq	ILMN_217601	ILMN_217601	OLFR1288	NM_146400.2	NM_146400.2		258395	121583712	NM_146400.2	Olfr1288	NP_666512.2	ILMN_2685373	006060424	S	694	GATTTATCCAAAGCATTTGTCACCTTGTCAGCTCACATCACTGTAGTGGT	2	+	111319636-111319685	2qE3	Mus musculus olfactory receptor 1288 (Olfr1288), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR245-9	MOR245-9
Mus musculus	MEEBO	ILMN_218268	ILMN_218268	MSX3	scl30522.2_40				6754755	NM_010836	Msx3		ILMN_2774332	005810626	S	1925	GGAATTTCACAGTGATAGATGGCCCAGGGTTAGGATGCTCTGGTTGGGAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35067] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_192371	ILMN_192371	ZFP90	scl022751.4_4	NM_011764.2			31981419	NM_011764.2	Zfp90		ILMN_2487482	002450075	S	11	GCTCCGCCCTTACTAAACACCACCGAGTTCACGCCCGGAATAAACTGCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217365	ILMN_251188	GIMAP8	NM_001077410.1	NM_001077410.1		243374	116686117	NM_001077410.1	Gimap8	NP_001070878.1	ILMN_1224195	004780114	S	2335	GGTCAGGCAGAAGGAAATTAGAAGACAAAGAGATTATGGAAGAGAAAATG	6	+	48609555-48609604	6qB2.3	Mus musculus GTPase, IMAP family member 8 (Gimap8), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	IAN9; IMAP8; Gm457	IAN9; IMAP8; Gm457
Mus musculus	Riken	ILMN_206283	ILMN_206283	A130090M16RIK	ri|A130090M16|PX00316O07|AK079510|2675					AK079510	A130090M16Rik		ILMN_2578961	006370626	S	2116	CGGTCCCAGCACGTGGGAGGCTGATTTAAGAGGGTCACCATGGGTTTAAG										
Mus musculus	Riken	ILMN_206311	ILMN_206311	DTNB	ri|D030074O22|PX00182D23|AK083752|3768					AK083752	Dtnb		ILMN_1233894	004280463	S	3688	TCCAGGTGCCCAGTATATCTTCCCAACATGAAGTCTGGAGCTACTGAGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190190	ILMN_190190	V1RG2	NM_134203.1	NM_134203.1		171237	21717720	NM_134203.1	V1rg2	NP_598964.1	ILMN_2467955	001450273	S	532	GCTGCATTGTATATGTTCTTACTGTGTTTCTCTGATGGACTATGTCTGGG	7	+	12342137-12342186	7qA1	Mus musculus vomeronasal 1 receptor, G2 (V1rg2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_197270	ILMN_197270	LOC381378	XM_358560.1	XM_358560.1			38074913	XM_358560.1	LOC381378		ILMN_1234198	006450168	S	468	CGGCTTGAGGCTGGACATTAGGAGGAGACCAGCAAGCAGACAAGAGGACC										
Mus musculus	RefSeq	ILMN_222321	ILMN_222321	AASDH	NM_173765.2	NM_173765.2		231326	142351537	NM_173765.2	Aasdh	NP_776126.1	ILMN_1221418	004730669	S	3518	CCTCTCCTGTGGTCTGGGAATCAATGCTTGTTATTGGGTGCAGAAACAAT	5	-	77305072-77305121	5qC3.3	Mus musculus aminoadipate-semialdehyde dehydrogenase (Aasdh), mRNA.		The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]; Catalysis of the reaction: L-2-aminoadipate 6-semialdehyde + NADP+ + H2O = L-2-aminoadipate + NADPH + H+ [goid 4043] [evidence IEA]	Aasdh; A830035E16	Aasdh; A830035E16
Mus musculus	RefSeq	ILMN_200070	ILMN_200070	LOC385682	XM_358911.1	XM_358911.1			38080208	XM_358911.1	LOC385682		ILMN_2537485	000630609	S	961	CGAGTTGGGCGAAGGTTGCTGAGTTTGATCCTGTTTAGCACTGGTTACTG										
Mus musculus	RefSeq	ILMN_217417	ILMN_217417	AFAP1L2	NM_146102.1	NM_146102.1		226250	22122606	NM_146102.1	Afap1l2	NP_666214.1	ILMN_2682991	006650091	S	2823	AAGATTTCATCCATCACTCAACTGTTTTACCAAGATTTTTCAGGTGTGAA	19	-	56987542-56987591	19qD2	Mus musculus actin filament associated protein 1-like 2 (Afap1l2), mRNA.				AU041783; MGC28084; KIAA1914; C86904; mKIAA1914	AU041783; MGC28084; KIAA1914; C86904; mKIAA1914
Mus musculus	Riken	ILMN_206700	ILMN_206700	C130092F19RIK	ri|C130092F19|PX00172M15|AK081994|1455					AK081994	C130092F19Rik		ILMN_1238970	003710128	S	1356	GCCTCGCATTCAGGAGGCAGAGAAAGGTAGGTGATGTACAGAACGAGGAC										
Mus musculus	RefSeq	ILMN_194512	ILMN_234024	EFCAB2	NM_026626.2	NM_026626.2		68226	31541840	NM_026626.2	Efcab2	NP_080902.1	ILMN_2684084	002370546	S	732	TCTTTTTTCTCCTTTTAAGACAACTGTAAACATTCAATTTCTAGTTGAAA	1	+	180411574-180411623	1qH4	Mus musculus EF-hand calcium binding domain 2 (Efcab2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	D830011E08Rik; 1700073K01Rik	D830011E08Rik; 1700073K01Rik
Mus musculus	RefSeq	ILMN_234024	ILMN_234024	EFCAB2	NM_026626.2	NM_026626.2		68226	31541840	NM_026626.2	Efcab2	NP_080902.1	ILMN_2904339	002900181	S	2282	GCTGGTAGGCTGCTTCGTTGGCAGTGAGAGATGGGCTAGGGAAAGTCAAG	1	+	180413124-180413173	1qH4	Mus musculus EF-hand calcium binding domain 2 (Efcab2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	D830011E08Rik; 1700073K01Rik	D830011E08Rik; 1700073K01Rik
Mus musculus	RefSeq	ILMN_194512	ILMN_234024	EFCAB2	NM_026626.2	NM_026626.2		68226	31541840	NM_026626.2	Efcab2	NP_080902.1	ILMN_1214753	004290377	S	2481	AAGGGGACATCTGCTAGAGACACAGGCTTTGAAGTTGTTAGCACACGGTG	1	+	180413323-180413372	1qH4	Mus musculus EF-hand calcium binding domain 2 (Efcab2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	D830011E08Rik; 1700073K01Rik	D830011E08Rik; 1700073K01Rik
Mus musculus	RefSeq	ILMN_185135	ILMN_261277	COL4A3BP	NM_023420.1	NM_023420.1		68018	12963670	NM_023420.1	Col4a3bp	NP_075909.1	ILMN_1245536	004920692	S	1565	CTCTTCCTCCATGTCTTCCATTGATCTAGTCAGTGCCTCTGACGATGTTC	13	+	97386985-97387026:97394650-97394657	13qD1	Mus musculus collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (Col4a3bp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]	2810404O15Rik; GPBP; AU016711; 9230101K08Rik; CERT	2810404O15Rik; GPBP; AU016711; 9230101K08Rik; CERT
Mus musculus	RefSeq	ILMN_185135	ILMN_261277	COL4A3BP	NM_023420.1	NM_023420.1		68018	12963670	NM_023420.1	Col4a3bp	NP_075909.1	ILMN_2613636	004010348	S	2467	CAGCACTAGCCATCTCCTGCTAGGCCTCCTCGCTCAGCGTGTAACTATAA	13	+	97407237-97407286	13qD1	Mus musculus collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (Col4a3bp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]	2810404O15Rik; GPBP; AU016711; 9230101K08Rik; CERT	2810404O15Rik; GPBP; AU016711; 9230101K08Rik; CERT
Mus musculus	RefSeq	ILMN_261277	ILMN_261277	COL4A3BP	NM_023420.1	NM_023420.1		68018	12963670	NM_023420.1	Col4a3bp	NP_075909.1	ILMN_2902575	001260440	S	2461	GGTATCCAGCACTAGCCATCTCCTGCTAGGCCTCCTCGCTCAGCGTGTAA	13	+	97407231-97407280	13qD1	Mus musculus collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (Col4a3bp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]	2810404O15Rik; GPBP; AU016711; 9230101K08Rik; CERT	2810404O15Rik; GPBP; AU016711; 9230101K08Rik; CERT
Mus musculus	RefSeq	ILMN_214056	ILMN_214056	EG235327	NM_177701.3	NM_177701.3		235327	141802762	NM_177701.3	EG235327	NP_808369.1	ILMN_2643786	006380110	S	2236	CTGTATTCTACTTTTATTAATTTTAGTCTTTCTTCACATTGGATGAGGGC	9	+	49088641-49088690	9qA5.3	Mus musculus predicted gene, EG235327 (EG235327), mRNA.				A430041E03	A430041E03
Mus musculus	RefSeq	ILMN_214056	ILMN_214056	EG235327	NM_177701.3	NM_177701.3		235327	141802762	NM_177701.3	EG235327	NP_808369.1	ILMN_2765095	003440379	S	807	CATGACACTCGCCACCCCACAACACATAACATAATTTCACCCTCAGTAAG	9	+	49087212-49087261	9qA5.3	Mus musculus predicted gene, EG235327 (EG235327), mRNA.				A430041E03	A430041E03
Mus musculus	RefSeq	ILMN_190327	ILMN_318870	4930439D14RIK	XM_001472276.1	XM_001472276.1		78167	149245225	XM_001472276.1	4930439D14Rik	XP_001472326.1	ILMN_1224215	006020072	S	931	AAAGTCTGGAAACGCTTGGCCCCCAGATCAAATACCCAGCCCGTGAGGGC	1	+	158870067-158870116	1qH1	PREDICTED: Mus musculus RIKEN cDNA 4930439D14 gene (4930439D14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_251488	ILMN_251488	LOC548597	NM_001081649.1	NM_001081649.1		548597	126032342	NM_001081649.1	LOC548597	NP_001075118.1	ILMN_2951499	004490544	S	47	CTTGTGAACACCGGGACACATTAGACCCTAGTTTCCTCACTGAGTTCAGG	4	+	73284081-73284130		Mus musculus similar to hypothetical protein 4930503F14 (LOC548597), mRNA.					
Mus musculus	RefSeq	ILMN_197356	ILMN_224468	LOC545472	XM_619824.4	XM_619824.4		545472	149250050	XM_619824.4	LOC545472	XP_619824.1	ILMN_1256983	000070653	S	1177	GAGATCCTGCTCAATGTCTGCTACACAGCATGCGCAACACTCAAGGGCCC	2	-	150325355-150325404	2qG3	PREDICTED: Mus musculus similar to BTB (POZ) domain containing 1 (LOC545472), mRNA.					
Mus musculus	RefSeq	ILMN_217885	ILMN_217885	2310065K24RIK	NM_028221.3	NM_028221.3		102122	148747167	NM_028221.3	2310065K24Rik	NP_082497.2	ILMN_2688834	003120437	S	1416	ATCCAGCCTGAGGAGGTAGGAAGGAGCTGACCACGAGAACATGACCATCC				8qC5	Mus musculus RIKEN cDNA 2310065K24 gene (2310065K24Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1700001O11Rik; AI596259	1700001O11Rik; AI596259
Mus musculus	RefSeq	ILMN_215197	ILMN_215197	RBM7	NM_144948.4	NM_144948.4		67010	146149304	NM_144948.4	Rbm7	NP_659197.2	ILMN_2656657	003780373	S	1306	CTGCTTATTAATAGTTTATTTAAAACAGTTTATTGGCTTTGTTTGGAGAT				9qA5.3	Mus musculus RNA binding motif protein 7 (Rbm7), mRNA.		Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AU041934; 1200007M24Rik; AW554393; 1500011D06Rik	AU041934; 1200007M24Rik; AW554393; 1500011D06Rik
Mus musculus	RefSeq	ILMN_199289	ILMN_199289	LOC245305	XM_143022.4	XM_143022.4			38093926	XM_143022.4	LOC245305		ILMN_2534713	007100050	S	1631	ATCGTAGTACTCTCCGTGTACATAAAAGAACACATACTGGAGAGAAGCCC										
Mus musculus	RefSeq	ILMN_188665	ILMN_252087	2010012O05RIK	NM_025563.3	NM_025563.3		66439	133893035	NM_025563.3	2010012O05Rik	NP_079839.1	ILMN_2748300	005490017	S	1507	CCACTAGGGAGTTTTACATATTAGTGTGTTGAAGGGTCACGTCAACCATA	19	+	46777203-46777252	19qC3	Mus musculus RIKEN cDNA 2010012O05 gene (2010012O05Rik), mRNA.				4930569L17Rik; AI467257; AI413851	4930569L17Rik; AI467257; AI413851
Mus musculus	RefSeq	ILMN_223344	ILMN_223344	PLUNC	NM_011126.2	NM_011126.2		18843	142348464	NM_011126.2	Plunc	NP_035256.1	ILMN_1258019	006560358	S	861	CCATGGACTACAGTTTGTCATCAAAGTTTAGGCATCCCAGGAAGGAAGGC	2	+	153973796-153973826:153973827-153973845	2qH1	Mus musculus palate, lung, and nasal epithelium associated (Plunc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	SPLUNC1; SPURT; NASG; LUNX	SPLUNC1; SPURT; NASG; LUNX
Mus musculus	RefSeq	ILMN_251602	ILMN_251602	OLFR668	NM_147059.1	NM_147059.1		259061	22128840	NM_147059.1	Olfr668	NP_667270.1	ILMN_2835637	003440446	S	194	TGGCCTTACTCTCCTTCACTGATGTTACCTGGTGTACTACCACTGTGCCC	7	-	112074033-112074082	7qE3	Mus musculus olfactory receptor 668 (Olfr668), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR34-3	MOR34-3
Mus musculus	RefSeq	ILMN_208872	ILMN_249346	SLC25A4	NM_007450.2	NM_007450.2		11739	91680540	NM_007450.2	Slc25a4	NP_031476.2	ILMN_1225312	000870100	S	1225	CACCTGATTAACTGAAGAACTGATGCTGAAAAGTAACTCAGTGTGACTCA				8qB1.1	Mus musculus solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 (Slc25a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU019225; Ant1	AU019225; Ant1
Mus musculus	RefSeq	ILMN_210372	ILMN_210372	RER1	NM_026395.1	NM_026395.1		67830	13385881	NM_026395.1	Rer1	NP_080671.1	ILMN_2935789	003420446	S	907	TGGACAGATTGTAGTGAACCGTAGGCTTGGGAGGCGAGGTGGGTGGCAAC	4	-	154448782-154448831	4qE2	Mus musculus RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae) (Rer1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU043380; 5830454N22Rik; 1110060F11Rik	AU043380; 5830454N22Rik; 1110060F11Rik
Mus musculus	RefSeq	ILMN_210372	ILMN_210372	RER1	NM_026395.1	NM_026395.1		67830	13385881	NM_026395.1	Rer1	NP_080671.1	ILMN_2935796	000050050	S	1135	CTCACTAGAGATGTTTCTCGAATTGGCCTCGATCATAATGACTCAAAACT	4	-	154448554-154448603	4qE2	Mus musculus RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae) (Rer1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU043380; 5830454N22Rik; 1110060F11Rik	AU043380; 5830454N22Rik; 1110060F11Rik
Mus musculus	RefSeq	ILMN_222586	ILMN_222586	HDGFL1	NM_008232.1	NM_008232.1		15192	6680198	NM_008232.1	Hdgfl1	NP_032258.1	ILMN_2874380	005890156	S	1198	TGGCGATGCTAGTCTACTCCACACCCACCCTGAGTGCCGCCCATAATTCC	13	-	26776337-26776386	13qA3.1	Mus musculus hepatoma derived growth factor-like 1 (Hdgfl1), mRNA.				Hdgfrp1; Pwwp1; MGC144484; MGC144483; 4921520N01Rik; MGC118278; HRP-1	Hdgfrp1; Pwwp1; MGC144484; MGC144483; 4921520N01Rik; MGC118278; HRP-1
Mus musculus	RefSeq	ILMN_250374	ILMN_250374	BC043301	NM_001008549.1	NM_001008549.1		210104	56711287	NM_001008549.1	BC043301	NP_001008549.1	ILMN_3040378	001070181	I	760	CCCTAACCTTGAAGCCAACGGTGAAGAGCAAGGCAGTGTCACAAAACAGC	7	+	50828275-50828324	7qB4	Mus musculus cDNA sequence BC043301 (BC043301), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC102645	MGC102645
Mus musculus	RefSeq	ILMN_200855	ILMN_250374	BC043301	NM_001008549.1	NM_001008549.1		210104	56711287	NM_001008549.1	BC043301	NP_001008549.1	ILMN_2705196	002480707	S	2768	CAGAAGTCTGTGTTGAAATGCCATCAGCGGACTCACACTTGCAAGAAGCC	7	+	50830283-50830332	7qB4	Mus musculus cDNA sequence BC043301 (BC043301), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC102645	MGC102645
Mus musculus	RefSeq	ILMN_250374	ILMN_250374	BC043301	NM_001008549.1	NM_001008549.1		210104	56711287	NM_001008549.1	BC043301	NP_001008549.1	ILMN_3114998	003780270	A	2894	GAGCATCCCAACTGGATGTGCAGCACTGGGTCTAGAATGGAGAGAGACAC	7	+	50830409-50830458	7qB4	Mus musculus cDNA sequence BC043301 (BC043301), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC102645	MGC102645
Mus musculus	RefSeq	ILMN_212439	ILMN_257409	1600014K23RIK	XM_921301.3	XM_921301.3		71996	149271976	XM_921301.3	1600014K23Rik	XP_926394.1	ILMN_1251706	001470192	S	586	CCGGTTGGGGGCTCCGGAAAATCAGGATGCGGAGAAGCTCTTCGACCAGC				XqC1	PREDICTED: Mus musculus RIKEN cDNA 1600014K23 gene, transcript variant 4 (1600014K23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215238	ILMN_215238	SLC2A1	NM_011400.2	NM_011400.2		20525	141802497	NM_011400.2	Slc2a1	NP_035530.1	ILMN_1258159	006350044	S	2342	AGGACCTCGGAGGCTGAGAACTTAACTGCTGAAGACACGGACACTCCTGC	4	+	118809727-118809776	4qD2.1	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 1 (Slc2a1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Glut-1; Glut1	Glut-1; Glut1
Mus musculus	RefSeq	ILMN_215257	ILMN_215257	SMARCD3	NM_025891.3	NM_025891.3		66993	77404372	NM_025891.3	Smarcd3	NP_080167.3	ILMN_1248397	001030044	S	1442	TGATGACAGATGTGGCAGGGAACCCCGAGGAAGAACGCAGGGCTGAGTTC	5	-	24098885-24098934	5qA3	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 (Smarcd3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein binding [goid 43393] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]	2210409C08Rik; 1500001J14Rik; BAF60C	2210409C08Rik; 1500001J14Rik; BAF60C
Mus musculus	RefSeq	ILMN_220028	ILMN_246209	D430042O09RIK	NM_001081022.1	NM_001081022.1		233865	124486627	NM_001081022.1	D430042O09Rik	NP_001074491.1	ILMN_1244804	005900743	S	6065	ACTTGGTCGGTGTTTATAAGCATATGCTCCATGCACTCTCAGAGGGAAGG	7	+	133018185-133018234	7qF3	Mus musculus RIKEN cDNA D430042O09 gene (D430042O09Rik), mRNA.				MGC31549	MGC31549
Mus musculus	RefSeq	ILMN_246209	ILMN_246209	D430042O09RIK	NM_001081022.1	NM_001081022.1		233865	124486627	NM_001081022.1	D430042O09Rik	NP_001074491.1	ILMN_3153835	006250630	A	5899	ATGAGCCGCACACCTCCCAGGAGAGCCATCAAACCAACTCTGCGGAGGAA	7	+	133018019-133018068	7qF3	Mus musculus RIKEN cDNA D430042O09 gene (D430042O09Rik), mRNA.				MGC31549	MGC31549
Mus musculus	MEEBO	ILMN_213199	ILMN_213199	SLC31A2	scl020530.4_0	NM_025286.1			13384631	NM_025286.1	Slc31a2		ILMN_2634656	006560270	S	1425	GGGGCTGGGTACTGACTGAGGGTGCAATAGCAATCAAACCAAAGCTAGGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219129	ILMN_219129	DPH3	NM_172254.3	NM_172254.3		105638	114145549	NM_172254.3	Dph3	NP_758458.1	ILMN_2704641	005810528	S	260	GATTTGGAAAATGGAGAAGATGTGGCCACGTGTCCTAGCTGCTCACTCAT	14	-	32898114-32898163	14qB	Mus musculus DPH3 homolog (KTI11, S. cerevisiae) (Dph3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DELGIP1; 2610018L09Rik; DelgipP1; AL022916; 5730511P15Rik; Desr1; AV083614; Zcsl2	DELGIP1; 2610018L09Rik; DelgipP1; AL022916; 5730511P15Rik; Desr1; AV083614; Zcsl2
Mus musculus	RefSeq	ILMN_185794	ILMN_185794	WBP2	NM_016852.2	NM_016852.2		22378	118131203	NM_016852.2	Wbp2	NP_058548.1	ILMN_1249698	001500300	S	1604	GCCCCCTGGATGCACTAAGAATTGCTCTTGTTCGTTCCTGGTCCAGACAC	11	-	115940028-115940077	11qE2	Mus musculus WW domain binding protein 2 (Wbp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_220730	ILMN_220730	CHES1	scl0268586.1_72	NM_183186.1			34147243	NM_183186.1	Ches1		ILMN_2725942	006250603	S	870	GCTACATCAACTTTTTATTTTTACTACTCTGATTCTGTAACACTTCTGAG										
Mus musculus	RefSeq	ILMN_220879	ILMN_220879	ZFP825	NM_146231.1	NM_146231.1		235956	22122798	NM_146231.1	Zfp825	NP_666343.1	ILMN_2798213	004200019	S	830	GTGTGATCAGTGTGGTAAAGCATTTGCACATCAAACGAGTCTCCAATGCC	13	-	74618008-74618057	13qC1	Mus musculus zinc finger protein 825 (Zfp825), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC18736	MGC18736
Mus musculus	RefSeq	ILMN_197369	ILMN_220879	ZFP825	NM_146231.1	NM_146231.1		235956	22122798	NM_146231.1	Zfp825	NP_666343.1	ILMN_2527895	004900192	S	188	AGAGGTGATGCTGGAGACCTACCAGAACATCACTGCTATAGGCTACAAGT	13	-	74620038-74620047:74620265-74620304	13qC1	Mus musculus zinc finger protein 825 (Zfp825), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC18736	MGC18736
Mus musculus	RefSeq	ILMN_217688	ILMN_234456	HCN4	NM_001081192.1	NM_001081192.1		330953	124487124	NM_001081192.1	Hcn4	NP_001074661.1	ILMN_2686416	003140075	S	1640	CCCGACAGCGCATCCATGACTACTATGAACACCGCTACCAAGGCAAGATG	9	+	58705573-58705622	9qB	Mus musculus hyperpolarization-activated, cyclic nucleotide-gated K+ 4 (Hcn4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts [goid 5222] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bcng3; Hcn3	Bcng3; Hcn3
Mus musculus	RefSeq	ILMN_200822	ILMN_200822	LOC385368	XM_358209.1	XM_358209.1			38086377	XM_358209.1	LOC385368		ILMN_2540127	000650243	S	125	CAGTTAACACAGAGGGCAAACAGTTTCAAGGGCTCCTGGATACCGGGGCC										
Mus musculus	RefSeq	ILMN_244182	ILMN_244182	MOBP	NM_001039365.1	NM_001039365.1		17433	86355502	NM_001039365.1	Mobp	NP_001034454.1	ILMN_3024681	002690360	I	695	AGCTGCTCTCTGCAAGTACTAACATGGGGGATCTGTCCACAGTACCAAGC	9	+	120017270-120017319	9qF4	Mus musculus myelin-associated oligodendrocytic basic protein (Mobp), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IDA]	MOBP155; R74645; MOBP69; AI839848; MOBP81; MOBP73; AI835053; MOBP170	MOBP155; R74645; MOBP69; AI839848; MOBP81; MOBP73; AI835053; MOBP170
Mus musculus	RefSeq	ILMN_244182	ILMN_244182	MOBP	NM_001039365.1	NM_001039365.1		17433	86355502	NM_001039365.1	Mobp	NP_001034454.1	ILMN_3097381	004040731	A	240	AACTCCAAGCGTGAGATCGTGGACCGCAAGTACAGCATCTGCAAGAGCGG	9	+	120016603-120016652	9qF4	Mus musculus myelin-associated oligodendrocytic basic protein (Mobp), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IDA]	MOBP155; R74645; MOBP69; AI839848; MOBP81; MOBP73; AI835053; MOBP170	MOBP155; R74645; MOBP69; AI839848; MOBP81; MOBP73; AI835053; MOBP170
Mus musculus	RefSeq	ILMN_218345	ILMN_236443	4930504O13RIK	NM_207527.2	NM_207527.2		403200	142349047	NM_207527.2	4930504O13Rik	NP_997410.1	ILMN_2694606	001230008	S	235	GCTCAAGTGGTGTTCCACGGACAAGATAAAGTGTGTGGAGCTCTCCGGCA	11	-	58260834-58260883	11qB1.3	Mus musculus RIKEN cDNA 4930504O13 gene (4930504O13Rik), mRNA.				Gm524	Gm524
Mus musculus	RefSeq	ILMN_223180	ILMN_223180	MED7	NM_025426.2	NM_025426.2		66213	31981285	NM_025426.2	Med7	NP_079702.2	ILMN_2832091	006420156	S	998	CTGGACAGAATGAACAACAAAGAGAAAGTTCAGGTCACAGAAGGGACCAG	11	+	46254674-46254723	11qB1.1	Mus musculus mediator complex subunit 7 (Med7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]	1110063B05Rik; Crsp9; Crsp33	1110063B05Rik; Crsp9; Crsp33
Mus musculus	RefSeq	ILMN_223180	ILMN_223180	MED7	NM_025426.2	NM_025426.2		66213	31981285	NM_025426.2	Med7	NP_079702.2	ILMN_1225666	006280504	S	930	GCCCCATTCAGAAGCAGGGATGAGAGTTAAAGCTGAGCCGATGGATACTG	11	+	46254606-46254655	11qB1.1	Mus musculus mediator complex subunit 7 (Med7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]	1110063B05Rik; Crsp9; Crsp33	1110063B05Rik; Crsp9; Crsp33
Mus musculus	RefSeq	ILMN_211037	ILMN_211037	OPHN1	NM_052976.3	NM_052976.3		94190	142345123	NM_052976.3	Ophn1	NP_443208.1	ILMN_1230281	005870553	S	3870	GTTGCTCTTGCTTCTATTTACCTCCAGCTTACATGGTCTTTTATCCCACC	X	-	95752866-95752915	XqC3	Mus musculus oligophrenin 1 (Ophn1), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	C130037N19Rik; MGC6513	C130037N19Rik; MGC6513
Mus musculus	RefSeq	ILMN_200051	ILMN_227308	LPHN3	NM_198702.2	NM_198702.2		319387	118130922	NM_198702.2	Lphn3	NP_941991.1	ILMN_1222898	001820634	S	5048	GCGGCAGCAGCGACGGATTCATAGTTCCTCCTAACAAAGATGGGGCCTCT	5	+	82223991-82224040	5qD-qE1	Mus musculus latrophilin 3 (Lphn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gm1379; 5430402I23Rik; LEC3; CIRL-3; D130075K09Rik; mKIAA0768; MGC99439	Gm1379; 5430402I23Rik; LEC3; CIRL-3; D130075K09Rik; mKIAA0768; MGC99439
Mus musculus	RefSeq	ILMN_200050	ILMN_227308	LPHN3	NM_198702.2	NM_198702.2		319387	118130922	NM_198702.2	Lphn3	NP_941991.1	ILMN_1236217	004850678	S	4127	GCCTCCGCACGCATTGCTGTAGTGGGAAAAGCACGGAGAGTTCGATTGGC	5	+	82195185-82195234	5qD-qE1	Mus musculus latrophilin 3 (Lphn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gm1379; 5430402I23Rik; LEC3; CIRL-3; D130075K09Rik; mKIAA0768; MGC99439	Gm1379; 5430402I23Rik; LEC3; CIRL-3; D130075K09Rik; mKIAA0768; MGC99439
Mus musculus	RefSeq	ILMN_227308	ILMN_227308	LPHN3	NM_198702.2	NM_198702.2		319387	118130922	NM_198702.2	Lphn3	NP_941991.1	ILMN_2782041	004830500	S	5629	GCGATTCATGGTCACTCGCAACCTGAGTTCACCACAGCGGGAATAGCTGT	5	+	82224572-82224621	5qD-qE1	Mus musculus latrophilin 3 (Lphn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gm1379; 5430402I23Rik; LEC3; CIRL-3; D130075K09Rik; mKIAA0768; MGC99439	Gm1379; 5430402I23Rik; LEC3; CIRL-3; D130075K09Rik; mKIAA0768; MGC99439
Mus musculus	RefSeq	ILMN_194466	ILMN_227308	LPHN3	NM_198702.2	NM_198702.2		319387	118130922	NM_198702.2	Lphn3	NP_941991.1	ILMN_1243590	004260348	S	3432	CCAGAGTGACCGCAACACCATTCACAAGAACCTCTGCATCAGCCTGTTCG	5	+	82153200-82153249	5qD-qE1	Mus musculus latrophilin 3 (Lphn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gm1379; 5430402I23Rik; LEC3; CIRL-3; D130075K09Rik; mKIAA0768; MGC99439	Gm1379; 5430402I23Rik; LEC3; CIRL-3; D130075K09Rik; mKIAA0768; MGC99439
Mus musculus	RefSeq	ILMN_197631	ILMN_197631	LOC381468	XM_358588.1	XM_358588.1			38076997	XM_358588.1	LOC381468		ILMN_2528805	006770605	S	211	GGACGGGCAGAGAGGTTGGAAGCCCGGTTTAGGAAAGGGGTGGAAAAGAG										
Mus musculus	RefSeq	ILMN_211828	ILMN_211828	HELLS	NM_008234.3	NM_008234.3		15201	87299599	NM_008234.3	Hells	NP_032260.2	ILMN_2672461	005260468	S	2686	TAACTAGTATTGCATACTTGATGAAAATTTTGTGGATTTTACTTAGTATA	19	+	39042434-39042483	19qC3	Mus musculus helicase, lymphoid specific (Hells), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; Any process involved in maintaining the methylation state of a nucleotide sequence [goid 10216] [evidence IMP]; The assembly of chromatin into heterochromatin near the centromere [goid 31508] [evidence IMP]; The process whereby a relatively unspecialized precursor cell acquires specialized features of B cells, T cells, or natural killer cells [goid 30098] [evidence TAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IMP]; The expansion of a lymphocyte population by cell division [goid 46651] [pmid 10781083] [evidence IEP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	PASG; AI323785; E130115I21Rik; YFK8; Lysh; LSH	PASG; AI323785; E130115I21Rik; YFK8; Lysh; LSH
Mus musculus	RefSeq	ILMN_211828	ILMN_211828	HELLS	NM_008234.3	NM_008234.3		15201	87299599	NM_008234.3	Hells	NP_032260.2	ILMN_2619885	003710521	S	1613	CTAGATCAGTTCCCTAGTGAATTAGAAAAACTAATAAGTCAAATACAGCC	19	+	39029253-39029302	19qC3	Mus musculus helicase, lymphoid specific (Hells), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; Any process involved in maintaining the methylation state of a nucleotide sequence [goid 10216] [evidence IMP]; The assembly of chromatin into heterochromatin near the centromere [goid 31508] [evidence IMP]; The process whereby a relatively unspecialized precursor cell acquires specialized features of B cells, T cells, or natural killer cells [goid 30098] [evidence TAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IMP]; The expansion of a lymphocyte population by cell division [goid 46651] [pmid 10781083] [evidence IEP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	PASG; AI323785; E130115I21Rik; YFK8; Lysh; LSH	PASG; AI323785; E130115I21Rik; YFK8; Lysh; LSH
Mus musculus	RefSeq	ILMN_216663	ILMN_216663	DIABLO	NM_023232.3	NM_023232.3		66593	85677503	NM_023232.3	Diablo	NP_075721.3	ILMN_1221981	006980301	S	1229	GTGAACAGCTCACCTGGTGCTCCCCACAGGCCCTTCTCTAACACGTACTT	5	-	123961999-123962048	5qF	Mus musculus diablo homolog (Drosophila) (Diablo), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU040403; Smac; 0610041G12Rik	AU040403; Smac; 0610041G12Rik
Mus musculus	RefSeq	ILMN_219156	ILMN_216663	DIABLO	NM_023232.3	NM_023232.3		66593	85677503	NM_023232.3	Diablo	NP_075721.3	ILMN_2704979	000990196	S	1481	TAGCATGTGCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCA	5	-	123961747-123961796	5qF	Mus musculus diablo homolog (Drosophila) (Diablo), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU040403; Smac; 0610041G12Rik	AU040403; Smac; 0610041G12Rik
Mus musculus	RefSeq	ILMN_212354	ILMN_212354	PDCD4	NM_011050.3	NM_011050.3		18569	142356921	NM_011050.3	Pdcd4	NP_035180.2	ILMN_2778122	005310600	S	2127	GAGTGAAGCTACTAAACCCCATGTTGGCTGCTGCTGTGGAAATGCTGTGC	19	+	54004060-54004109	19qD2	Mus musculus programmed cell death 4 (Pdcd4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MA-3; D19Ucla1; TIS	MA-3; D19Ucla1; TIS
Mus musculus	RefSeq	ILMN_188594	ILMN_212354	PDCD4	NM_011050.3	NM_011050.3		18569	142356921	NM_011050.3	Pdcd4	NP_035180.2	ILMN_1214782	002970497	S	2065	GAAAGGAGCGGCAGTCATACATGAACGTGAAACTTGGAATGATCAGGTCC	19	+	54003998-54004047	19qD2	Mus musculus programmed cell death 4 (Pdcd4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MA-3; D19Ucla1; TIS	MA-3; D19Ucla1; TIS
Mus musculus	RefSeq	ILMN_212354	ILMN_212354	PDCD4	NM_011050.3	NM_011050.3		18569	142356921	NM_011050.3	Pdcd4	NP_035180.2	ILMN_1253237	001940113	S	2016	GGACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCCTTTC	19	+	54003949-54003998	19qD2	Mus musculus programmed cell death 4 (Pdcd4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MA-3; D19Ucla1; TIS	MA-3; D19Ucla1; TIS
Mus musculus	RefSeq	ILMN_196421	ILMN_196421	2310005E17RIK	XM_127486.1	XM_127486.1			20909335	XM_127486.1	2310005E17Rik		ILMN_1222852	004230441	S	1019	CTTCTGGTTCTCATAACACACAGGAGTTTACGGCCTTGGATCTGGCCCAA										
Mus musculus	RefSeq	ILMN_253083	ILMN_253083	CP	NM_007752.2	NM_007752.2		12870	110347563	NM_007752.2	Cp	NP_031778.2	ILMN_3083163	006250494	A	3194	GCACACTGTACACTTCCACGGCCACAGCTTCCAATACAAGCACAGGGGAG	3	+	19888033-19888072:19889053-19889062	3qA2	Mus musculus ceruloplasmin (Cp), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O [goid 4322] [evidence IDA]	D3Ertd555e	D3Ertd555e
Mus musculus	MEEBO	ILMN_190914	ILMN_190914	6446580_744_RC	6446580_744_rc						6446580_744_rc		ILMN_2474380	007560017	S	8	CCCTGATATCCGATGTTGTAGTTGGACAGCATTTGCACCAAAAACCAGTC										
Mus musculus	RefSeq	ILMN_209145	ILMN_240668	GUCY2C	NM_145067.2	NM_145067.2		14917	141801773	NM_145067.2	Gucy2c	NP_659504.1	ILMN_1248741	000050328	S	3150	TCGTTAGCGCCTTACAGAAAAGACAGGCCTCGGGCAAGAAGAGCCGGAGG	6	-	136646469-136646518	6qG1	Mus musculus guanylate cyclase 2c (Gucy2c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IDA]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]	Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IMP]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	GC-C; MGC107510; Gcc; AI893437	GC-C; MGC107510; Gcc; AI893437
Mus musculus	RefSeq	ILMN_213682	ILMN_213682	PEG12	NM_013788.1	NM_013788.1		27412	7305066	NM_013788.1	Peg12	NP_038816.1	ILMN_1221331	001300239	S	2542	GCCCAAAAGTATAAACCAGGACATTCTGTATATTTTTTACGAGTCTAGTG	7	-	69606805-69606854	7qC	Mus musculus paternally expressed 12 (Peg12), mRNA.		Axis specification in the embryo [goid 578] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]		Frat3	Frat3
Mus musculus	MEEBO	ILMN_184823	ILMN_184823	ACACB	scl27391.19_438				48976024	NM_133904	Acacb		ILMN_2421890	002570114	S	13	AAGGTCCTCTTGATGTGGAGGAAAGCCCAGACCGACACTGGCTGCCACCC								Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199840	ILMN_199840	LOC383981	XM_357361.1	XM_357361.1			38077907	XM_357361.1	LOC383981		ILMN_2536676	002630653	S	117	TGTGAACCGCCTGGTCAACTTGCACCTGCGGGCCTCCTACACCTACCTCT										
Mus musculus	RefSeq	ILMN_220449	ILMN_220449	NFE2	NM_008685.2	NM_008685.2		18022	40254625	NM_008685.2	Nfe2	NP_032711.2	ILMN_2881620	001170170	S	1455	GAGAGTGGACACTGGTGCTAGAGACTCCCTCATTCCCTTCTGATGAAGGC	15	-	103078812-103078861	15qF3	Mus musculus nuclear factor, erythroid derived 2 (Nfe2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	p45NFE2; p45; 45kDa; p45nf-e2; NF-E2	p45NFE2; p45; 45kDa; p45nf-e2; NF-E2
Mus musculus	RefSeq	ILMN_217628	ILMN_242787	IL12A	NM_008351.1	NM_008351.1		16159	6680394	NM_008351.1	Il12a	NP_032377.1	ILMN_2706462	002070468	S	952	GGCACAGCTACCTCAGCATGGTCCCCTCCATCGCTTCTCTCATATTCACT	3	+	68502118-68502167	3qE1	Mus musculus interleukin 12a (Il12a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A protein complex that is composed of an interleukin-12 alpha and an interleukin-12 beta subunit and is secreted into the extracellular space [goid 43514] [evidence IDA]; A protein complex that is composed of an interleukin-12 alpha and an interleukin-12 beta subunit and is secreted into the extracellular space [goid 43514] [evidence IGI]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the interleukin-12 receptor [goid 5143] [evidence IEA]; Interacting selectively with the beta subunit of interleukin-12 [goid 42163] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	Il-12a; MGC151228; p35; Ll12a; MGC151232; IL-12p35	Il-12a; MGC151228; p35; Ll12a; MGC151232; IL-12p35
Mus musculus	RefSeq	ILMN_210660	ILMN_210660	LPCAT3	NM_145130.1	NM_145130.1		14792	21699057	NM_145130.1	Lpcat3	NP_660112.1	ILMN_1237328	002680703	S	1466	TCTTGAGCCTACTATTCATATTGCCTTATATCCACAAAGCAATGGTGCCA	6	+	124648297-124648346	6qF2	Mus musculus lysophosphatidylcholine acyltransferase 3 (Lpcat3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 1-acyl-sn-glycero-3-phosphocholine + acyl-CoA = phosphatidylcholine + CoA [goid 47184] [evidence IEA]	Oact5; C3f; Moact5; PTG; Grcc3f	Oact5; C3f; Moact5; PTG; Grcc3f
Mus musculus	RefSeq	ILMN_210660	ILMN_210660	LPCAT3	NM_145130.1	NM_145130.1		14792	21699057	NM_145130.1	Lpcat3	NP_660112.1	ILMN_2980858	007510619	S	1539	GGAATGATCTCTGTCTTTCCCTGGTGGCCGAGAGCTGGACTGGTGCAGAA	6	+	124648370-124648401:124648511-124648528	6qF2	Mus musculus lysophosphatidylcholine acyltransferase 3 (Lpcat3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 1-acyl-sn-glycero-3-phosphocholine + acyl-CoA = phosphatidylcholine + CoA [goid 47184] [evidence IEA]	Oact5; C3f; Moact5; PTG; Grcc3f	Oact5; C3f; Moact5; PTG; Grcc3f
Mus musculus	RefSeq	ILMN_199628	ILMN_199628	LOC383766	XM_357232.1	XM_357232.1			38075330	XM_357232.1	LOC383766		ILMN_2535911	003370376	S	423	CCGCAGGGAGCAGTTCTGCATCAAGGAGCTGGAGGCCTGGGTTCTGAGCT										
Mus musculus	RefSeq	ILMN_207200	ILMN_244690	PHLPP	XM_900133.2	XM_900133.2		98432	94363844	XM_900133.2	Phlpp	XP_905226.1	ILMN_1237430	000610025	S	392	CACCTCCCACCAGTTTTAGGTCAGTATCGCTGGCTTTGTCTCCTAGCCTC	1	+	108114794-108114843	1qE2.1	PREDICTED: Mus musculus PH domain and leucine rich repeat protein phosphatase, transcript variant 2 (Phlpp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_204625	ILMN_204625	ADRA1A, GPCR	ri|C730025J11|PX00086B04|AK050183|3649					AK050183	Adra1a, GPCR		ILMN_2566425	000540161	S	3418	CTGTCAGAGAGTCCCCAGAATGAGAGGCCAGGTGGCATAAGGATGATGGA										
Mus musculus	RefSeq	ILMN_211030	ILMN_211030	FAM134C	NM_028933.3	NM_028933.3		67998	146141096	NM_028933.3	Fam134c	NP_083209.1	ILMN_2611748	002190156	S	2999	GTTGTGTACTTCCTTGATAAGTCTTCTCATTAATCTGATAATAGCTAATC				11qD	Mus musculus family with sequence similarity 134, member C (Fam134c), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4933404C01Rik; AI551748	4933404C01Rik; AI551748
Mus musculus	RefSeq	ILMN_258184	ILMN_258184	ALOX5AP	NM_009663.1	NM_009663.1		11690	33563241	NM_009663.1	Alox5ap	NP_033793.1	ILMN_2863837	005270279	S	719	CCCCTCGAATGCGGCGGTGGCCCAGGATTTATTGTCTACATCCAGCCTAT	5	+	150099488-150099537	5qG3	Mus musculus arachidonate 5-lipoxygenase activating protein (Alox5ap), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]	Increases the activity of an enzyme [goid 8047] [evidence IEA]	Flap	Flap
Mus musculus	RefSeq	ILMN_186986	ILMN_226033	ELL3	NM_145973.2	NM_145973.2		269344	35901197	NM_145973.2	Ell3	NP_666085.2	ILMN_2627179	006590368	S	1414	GGCATGGTATCATCTCCTCAGCTGTGCCAGGAGACTAGGAAAGTAGGAGG	2	-	121264973-121265022	2qE5	Mus musculus elongation factor RNA polymerase II-like 3 (Ell3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	A930015D22Rik; MGC31450	A930015D22Rik; MGC31450
Mus musculus	RefSeq	ILMN_213573	ILMN_213573	HECW2	NM_172655.2	NM_172655.2		329152	150456437	NM_172655.2	Hecw2	NP_766243.1	ILMN_2638511	003060072	S	1053	GGTGTGTCTTGTCGATAAGAAGTGGAATGTGTCTCTTTAATAAGTGCCCT				1qC1.1	Mus musculus HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 (Hecw2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Nedl2; Gm971; A730039N16Rik; mKIAA1301; D030049F17Rik	Nedl2; Gm971; A730039N16Rik; mKIAA1301; D030049F17Rik
Mus musculus	RefSeq	ILMN_237635	ILMN_237635	OTTMUSG00000017677	NM_001025383.1	NM_001025383.1		574404	85701573	NM_001025383.1	OTTMUSG00000017677	NP_001020554.1	ILMN_3107256	001500280	A	494	GTGGCTGGAAGGGCCAGCTGTGGCCTGCAAGGGTGTTGTCCAGACCCAGG	X	+	70372368-70372417	XqA7.3	Mus musculus predicted gene, OTTMUSG00000017677 (OTTMUSG00000017677), mRNA.				MGC106740	MGC106740
Mus musculus	RefSeq	ILMN_237635	ILMN_237635	OTTMUSG00000017677	NM_001025383.1	NM_001025383.1		574404	85701573	NM_001025383.1	OTTMUSG00000017677	NP_001020554.1	ILMN_3033562	000270722	I	2677	CTCACTAAGTGTTTCTTTACCCCCTCGAAATAAATGTTCACGTTCCTGCA	X	+	70374551-70374599	XqA7.3	Mus musculus predicted gene, OTTMUSG00000017677 (OTTMUSG00000017677), mRNA.				MGC106740	MGC106740
Mus musculus	RefSeq	ILMN_192453	ILMN_232152	MON1B	NM_173015.2	NM_173015.2		270096	114326483	NM_173015.2	Mon1b	NP_766603.1	ILMN_1219118	006510707	S	3161	AGTGAAGGCCAACAGGGTAGATGGGAAAGAGGCTTCGGCTCATTACGATA	8	+	116167206-116167255	8qE1	Mus musculus MON1 homolog b (yeast) (Mon1b), transcript variant 1, mRNA.				5031407H10; 5033413H12Rik	5031407H10; 5033413H12Rik
Mus musculus	RefSeq	ILMN_192453	ILMN_232152	MON1B	NM_173015.2	NM_173015.2		270096	114326483	NM_173015.2	Mon1b	NP_766603.1	ILMN_2594558	002450180	S	3153	CCCGAGGTAGTGAAGGCCAACAGGGTAGATGGGAAAGAGGCTTCGGCTCA	8	+	116167198-116167247	8qE1	Mus musculus MON1 homolog b (yeast) (Mon1b), transcript variant 1, mRNA.				5031407H10; 5033413H12Rik	5031407H10; 5033413H12Rik
Mus musculus	RefSeq	ILMN_232152	ILMN_232152	MON1B	NM_173015.2	NM_173015.2		270096	114326483	NM_173015.2	Mon1b	NP_766603.1	ILMN_3053203	004540148	I	215	GAAACCGCACTAGGAATGTATCCGGGGGGTCTGGCTCCCTGAAGGCTTGT	8	+	116159913-116159962	8qE1	Mus musculus MON1 homolog b (yeast) (Mon1b), transcript variant 1, mRNA.				5031407H10; 5033413H12Rik	5031407H10; 5033413H12Rik
Mus musculus	MEEBO	ILMN_215047	ILMN_215047	B530045E10RIK	scl38494.6.1_327	NM_177302.2			31343291	NM_177302.2	B530045E10Rik		ILMN_2654916	002320594	S	3081	CTTGTGTGCTCTGTCTCTGCGGCATAAAGTCTGACCAATGCAGGAGCCAT										
Mus musculus	Riken	ILMN_203275	ILMN_203275	9430038G21RIK	ri|9430038G21|PX00108F18|AK034787|1902					AK034787	9430038G21Rik		ILMN_1238867	002320468	S	1502	TCATGAGATCCAACACCCCCTTGGAGCCCCAGTTGGCATCAGCACACATG										
Mus musculus	RefSeq	ILMN_198141	ILMN_313583	LOC100042744	XM_001478737.1	XM_001478737.1		100042744	149268636	XM_001478737.1	LOC100042744	XP_001478787.1	ILMN_1229730	003800494	S	527	TAGAGGGACTGGGGAGAGGACAGAGGGGTCTATCTGCACTGGGCCTTCTC	17	+	27878255-27878304	17qA3.3	PREDICTED: Mus musculus hypothetical protein LOC100042744 (LOC100042744), mRNA.					
Mus musculus	RefSeq	ILMN_198122	ILMN_313856	EG381070	XM_001478765.1	XM_001478765.1		381070	149268641	XM_001478765.1	EG381070	XP_001478815.1	ILMN_1236928	006770546	S	196	CTGAGAGCACCCCGAGCCATCCCAACCCAGGCAGATGTTCTTCAGATCCA	17	-	23689971-23690020	17qA3.3	PREDICTED: Mus musculus predicted gene, EG381070 (EG381070), mRNA.					
Mus musculus	RefSeq	ILMN_222320	ILMN_222320	PIGF	NM_008838.1	NM_008838.1		18701	6679314	NM_008838.1	Pigf	NP_032864.1	ILMN_2901903	003840561	S	607	CTAGTTTCACAGGAGCGTGGCTTGGAGCATTTCCTATTCCACTGGATTGG	17	-	87408157-87408206	17qE4	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class F (Pigf), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence TAS]		
Mus musculus	RefSeq	ILMN_186205	ILMN_255603	COBLL1	NM_177025.4	NM_177025.4		319876	142348163	NM_177025.4	Cobll1	NP_795999.2	ILMN_1234199	001940154	S	3895	CCAGGACAGTCGCTAATATTACCCTGCTGTGACACACTTCACCGACCAGC	2	-	64927493-64927527:64927528-64927542	2qC1.3	Mus musculus Cobl-like 1 (Cobll1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D430044D16Rik; Coblr1; 1810047P18Rik	D430044D16Rik; Coblr1; 1810047P18Rik
Mus musculus	RefSeq	ILMN_214171	ILMN_214171	DEDD	NM_011615.2	NM_011615.2		21945	34328201	NM_011615.2	Dedd	NP_035745.2	ILMN_2857679	001340360	S	1348	CTGCTTTCAGGTGCATTGAGGGGTAATCAATACTTATGGCTTTATGAGGG	1	+	173271646-173271695	1qH3	Mus musculus death effector domain-containing (Dedd), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	KE05; CASP8IP1; Dedpro1; FLDED1; DEFT	KE05; CASP8IP1; Dedpro1; FLDED1; DEFT
Mus musculus	RefSeq	ILMN_214171	ILMN_214171	DEDD	NM_011615.2	NM_011615.2		21945	34328201	NM_011615.2	Dedd	NP_035745.2	ILMN_2645074	003520709	S	565	TAGTAAGCGGCCAGCCCGAGGGAGAACCACACTTGGGAGCCAGCGAAAAC	1	+	173270375-173270424	1qH3	Mus musculus death effector domain-containing (Dedd), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	KE05; CASP8IP1; Dedpro1; FLDED1; DEFT	KE05; CASP8IP1; Dedpro1; FLDED1; DEFT
Mus musculus	Riken	ILMN_202348	ILMN_202348	PPP1R2	ri|4930440J04|PX00031E04|AK015349|1361					AK015349	Ppp1r2		ILMN_1214705	001690328	S	437	AGATTAGCATGCTGCTCGAAGGCTCAGCAGCCAATAGTATCGGGACTCAG							Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215911	ILMN_248679	1700024G10RIK	XM_910148.3	XM_910148.3		71849	149233717	XM_910148.3	1700024G10Rik	XP_915241.1	ILMN_1256373	003780091	S	534	CCCTCAGGCCATGCACCGGACCAAACTCAAGGACCTAGCTACCCAGACTT				1qB	PREDICTED: Mus musculus RIKEN cDNA 1700024G10 gene, transcript variant 4 (1700024G10Rik), mRNA.					
Mus musculus	Riken	ILMN_203974	ILMN_203974	A530026H04RIK	ri|A530026H04|PX00140I22|AK040807|1862					AK040807	A530026H04Rik		ILMN_2561408	006420762	S	1673	CCTTGAACCAGGAATGGACCCTCCAGATGCCAGTACAAAGGCACACAGCA										
Mus musculus	RefSeq	ILMN_185936	ILMN_185936	TNIP2	NM_139064.1	NM_139064.1		231130	20532343	NM_139064.1	Tnip2	NP_620703.1	ILMN_2874491	006620131	S	1473	CCTGGGATCTAGGGCCCAAATGGGCAGGGTCACTGGAAGGTCATCTTGTT	5	-	34813396-34813445	5qB2	Mus musculus TNFAIP3 interacting protein 2 (Tnip2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI428870; ABIN-2	AI428870; ABIN-2
Mus musculus	RefSeq	ILMN_185936	ILMN_185936	TNIP2	NM_139064.1	NM_139064.1		231130	20532343	NM_139064.1	Tnip2	NP_620703.1	ILMN_2874489	003290386	S	1564	ACAGAGCAGGAGGAAGAGGGTGGGGTCAGGGACATCAAGTGGACATCAGT	5	-	34813305-34813354	5qB2	Mus musculus TNFAIP3 interacting protein 2 (Tnip2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI428870; ABIN-2	AI428870; ABIN-2
Mus musculus	RefSeq	ILMN_211363	ILMN_211363	DPP4	NM_010074.2	NM_010074.2		13482	31981797	NM_010074.2	Dpp4	NP_034204.1	ILMN_2615096	003060546	S	3202	ACGCTGCCAGCAATGTAAGGGCCCCAGGTGCCAGTTATGGCTATAGGTGC	2	-	62169997-62170046	2qC1.3	Mus musculus dipeptidylpeptidase 4 (Dpp4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates [goid 46581] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	Dpp-4; THAM; Cd26	Dpp-4; THAM; Cd26
Mus musculus	RefSeq	ILMN_220006	ILMN_220006	4921528I01RIK	NM_027616.2	NM_027616.2		70950	141802153	NM_027616.2	4921528I01Rik	NP_081892.1	ILMN_2716346	007100349	S	3058	GGCTTCCCCAGATTTCCCCACCGTGTTGGCCCAAATAAAGGCTTTGTGAG	18	-	21969625-21969674	18qA2	Mus musculus RIKEN cDNA 4921528I01 gene (4921528I01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_250037	ILMN_250037	2700094K13RIK	NM_001037279.1	NM_001037279.1		72657	82546882	NM_001037279.1	2700094K13Rik	NP_001032356.1	ILMN_3088934	002230446	A	557	TTCCTCACCAGAAGTGATGGTTCAGTTGTGAGGCAGCCCTCCAGCAAGAC	2	-	84509425-84509474	2qD	Mus musculus RIKEN cDNA 2700094K13 gene (2700094K13Rik), transcript variant 2, mRNA.		Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	Selh	Selh
Mus musculus	RefSeq	ILMN_187466	ILMN_250037	2700094K13RIK	NM_001037279.1	NM_001037279.1		72657	82546882	NM_001037279.1	2700094K13Rik	NP_001032356.1	ILMN_1244773	003890187	S	516	GCATGGCCAAACTTAAGCTATGCACCTGAAGCCATAGTTTCTTCCTCACC	2	-	84509466-84509515	2qD	Mus musculus RIKEN cDNA 2700094K13 gene (2700094K13Rik), transcript variant 2, mRNA.		Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	Selh	Selh
Mus musculus	RefSeq	ILMN_221410	ILMN_221410	COL18A1	NM_009929.2	NM_009929.2		12822	40789281	NM_009929.2	Col18a1	NP_034059.2	ILMN_2937542	003450066	S	4560	CCTGCCAGGGGAGGTTCCCAAGCTCAGTAACTCACTGTGACCCCAGATCT	10	-	76515329-76515378	10qC1	Mus musculus procollagen, type XVIII, alpha 1 (Col18a1), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell [goid 1886] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	endostatin	endostatin
Mus musculus	RefSeq	ILMN_221410	ILMN_221410	COL18A1	NM_009929.2	NM_009929.2		12822	40789281	NM_009929.2	Col18a1	NP_034059.2	ILMN_2735184	005690270	S	4927	GGGACAATCCAGTGGGTCTGGTTCTGTGACAATGTGTGCTATGATGCCAT	10	-	76514962-76515011	10qC1	Mus musculus procollagen, type XVIII, alpha 1 (Col18a1), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell [goid 1886] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	endostatin	endostatin
Mus musculus	RefSeq	ILMN_221410	ILMN_221410	COL18A1	NM_009929.2	NM_009929.2		12822	40789281	NM_009929.2	Col18a1	NP_034059.2	ILMN_1225839	003800358	S	84	TCACCAGTTTGGTCTTGCTGCTGGTGGCACGCGTCTCCTGGGCAGAGCCA	10	-	76629035-76629084	10qC1	Mus musculus procollagen, type XVIII, alpha 1 (Col18a1), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell [goid 1886] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	endostatin	endostatin
Mus musculus	MEEBO	ILMN_221770	ILMN_221770	8030423F21RIK	scl26586.3_397				51710997	XM_485607	8030423F21Rik		ILMN_1220120	003780309	S	2490	AAAGTCAGCTTACAAAGAGGACGTTTATTCTGGTCAATGCTTTCCTGGGT										
Mus musculus	RefSeq	ILMN_188965	ILMN_188965	WAP	NM_011709.5	NM_011709.5		22373	146134456	NM_011709.5	Wap	NP_035839.3	ILMN_1232780	004890202	S	491	GACCCTTCACTCCTGGATCCAGAGAGAACATAATGCTTTCAATCTGCTGC				11qA1	Mus musculus whey acidic protein (Wap), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	MGC25317	MGC25317
Mus musculus	RefSeq	ILMN_198896	ILMN_319064	GM505	XM_001480333.1	XM_001480333.1		244666	149259387	XM_001480333.1	Gm505	XP_001480383.1	ILMN_1236401	007400228	S	1706	CGAGCACTTGGACCGATGCCTGGAAGGTAACAAAACCAACCTGCGACCTC				8qE2	PREDICTED: Mus musculus gene model 505, (NCBI) (Gm505), mRNA.					
Mus musculus	Riken	ILMN_205596	ILMN_205596	9630020E24RIK	ri|9630020E24|PX00115J09|AK035951|3820					AK035951	9630020E24Rik		ILMN_1222575	007000482	S	3609	CCATGGATTCAGTCAGGAAGCATAGCCAGAGGTGATAACTCAGCAGGGTT										
Mus musculus	RefSeq	ILMN_250402	ILMN_250402	CXCL2	NM_009140.2	NM_009140.2		20310	118130527	NM_009140.2	Cxcl2	NP_033166.1	ILMN_2811154	005390639	S	259	CAAGGGCGGTCAAAAAGTTTGCCTTGACCCTGAAGCCCCCCTGGTTCAGA	5	+	91333392-91333441	5qE1	Mus musculus chemokine (C-X-C motif) ligand 2 (Cxcl2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	Mgsa-b; GROb; Scyb2; MIP-2a; CINC-2a; MIP-2; Mip2; Gro2; Scyb	Mgsa-b; GROb; Scyb2; MIP-2a; CINC-2a; MIP-2; Mip2; Gro2; Scyb
Mus musculus	Riken	ILMN_205295	ILMN_205295	4833435K08RIK	ri|4833435K08|PX00313L07|AK029433|1896					AK029433	4833435K08Rik		ILMN_1244840	000010608	S	1678	CTATGAAGGGGTGGGTATTTGAGGGGGTTTGGGTGGCAGGCTCGGGTCTT										
Mus musculus	RefSeq	ILMN_227198	ILMN_227198	CYB5D2	NM_001024926.1	NM_001024926.1		192986	67972403	NM_001024926.1	Cyb5d2	NP_001020097.1	ILMN_2957968	000160133	S	1593	TCTCATGTTTCCAGGTCAGCCTTGAACTCAGTATGTAAGCATGTGCTCCC	11	-	72591164-72591213	11qB4	Mus musculus cytochrome b5 domain containing 2 (Cyb5d2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	9330151E16Rik; RP23-327G1.2; Gm2	9330151E16Rik; RP23-327G1.2; Gm2
Mus musculus	RefSeq	ILMN_198904	ILMN_198904	LOC234582	XM_150129.3	XM_150129.3			38089550	XM_150129.3	LOC234582		ILMN_2533339	007610402	S	1909	TAGGACATCCAGGGTGGAAGAGGACCGACCCCAAAGCACAGATGCCCAGC										
Mus musculus	MEEBO	ILMN_186535	ILMN_186535	SCL0003313.1_43	scl0003313.1_43	AK078021.1			26346902	AK078021.1	scl0003313.1_43		ILMN_1220970	004640504	S	15	CCCCATCCAGTCATCCCGACTCCCCTGAAAATGAAAAGACAGAGACCACA										
Mus musculus	RefSeq	ILMN_200988	ILMN_255780	LOC384696	XM_001001665.1	XM_001001665.1		384696	94419745	XM_001001665.1	LOC384696	XP_001001665.1	ILMN_2540710	003450468	S	87	TGCTCATGGTAAATCCGTGAAAACCACTGAGGAAGTGGCTCTTCAGCTCC				7qA3	PREDICTED: Mus musculus gene model 1447, (NCBI) (LOC384696), mRNA.					
Mus musculus	RefSeq	ILMN_217136	ILMN_217136	1200011O22RIK	NM_027891.3	NM_027891.3		71735	146141187	NM_027891.3	1200011O22Rik	NP_082167.1	ILMN_2679477	004230470	S	2998	CTCCAACATCGTGTCCATCTGGAGGAGATGCTAGTCTGCCTGCACAAGGC				5qG2	Mus musculus RIKEN cDNA 1200011O22 gene (1200011O22Rik), mRNA.				AW548074; AU042569	AW548074; AU042569
Mus musculus	RefSeq	ILMN_215152	ILMN_215152	SERPINA1E	NM_009247.2	NM_009247.2		20704	76881810	NM_009247.2	Serpina1e	NP_033273.1	ILMN_1220234	004280292	S	1159	TTACAAGGCGGTTTTTTGTCTATGCCCCCTATCTTGCACTTCAACCGCCC	12	-	105185306-105185355	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 1e (Serpina1e), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	PI5; Dom5; Spi1-5	PI5; Dom5; Spi1-5
Mus musculus	RefSeq	ILMN_206641	ILMN_321503	ENSMUSG00000044227	XM_001480668.1	XM_001480668.1		640627	149268039	XM_001480668.1	ENSMUSG00000044227	XP_001480718.1	ILMN_2581604	004070634	S	206	CCGCCCACTGTGCTGTGGAAGATACTGGTCTTATGGCTTCTACTGAGGAG				16qC3.3	PREDICTED: Mus musculus predicted gene, ENSMUSG00000044227 (ENSMUSG00000044227), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	MEEBO	ILMN_185511	ILMN_185511	2610304F08RIK	scl39716.1.249_330						2610304F08Rik		ILMN_1246824	003170441	S	1	GCACTGTGGGATGCCCTAATGGCTTCCTCAAATATACGGAGGACGATAAT										
Mus musculus	RefSeq	ILMN_191348	ILMN_191348	UBE2E1	NM_009455.3	NM_009455.3		22194	142365631	NM_009455.3	Ube2e1	NP_033481.1	ILMN_1231810	004860608	S	12	GGCCGGGGAAGCCATTGCCTGGTTAATAGTTGCTGTTGCTGCACTTCCGC	14	-	19164297-19164346	14qA2	Mus musculus ubiquitin-conjugating enzyme E2E 1, UBC4/5 homolog (yeast) (Ube2e1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	ubcM2; Ubce5; UbcM3	ubcM2; Ubce5; UbcM3
Mus musculus	RefSeq	ILMN_212365	ILMN_212365	LIPK	NM_172837.3	NM_172837.3		240633	146198632	NM_172837.3	Lipk	NP_766425.1	ILMN_2625585	007000181	S	1910	ACCAACCATTAAGATATAGCAAGTATATAATAAATGTAATATTTGATTCT				19qC1	Mus musculus lipase, family member K (Lipk), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC67675; Lipl2; 9930115F20; BC055815	MGC67675; Lipl2; 9930115F20; BC055815
Mus musculus	RefSeq	ILMN_212365	ILMN_212365	LIPK	NM_172837.3	NM_172837.3		240633	146198632	NM_172837.3	Lipk	NP_766425.1	ILMN_1254211	005910274	S	938	GTCACAGAGTCCTGCAGGAACATCTGTTCAGAACATGCTGCACTGGGCCC				19qC1	Mus musculus lipase, family member K (Lipk), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC67675; Lipl2; 9930115F20; BC055815	MGC67675; Lipl2; 9930115F20; BC055815
Mus musculus	RefSeq	ILMN_243254	ILMN_243254	OLFR207	NM_001011792.1	NM_001011792.1		257973	58801349	NM_001011792.1	Olfr207	NP_001011792.1	ILMN_3007198	007150370	S	647	CCTATGTCCGTGTCCTCTTTGCCATCCTGAGAACAAAGTCTGAGAGGGGC	16	-	59361346-59361395	16qC1.3	Mus musculus olfactory receptor 207 (Olfr207), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR182-9	MOR182-9
Mus musculus	RefSeq	ILMN_219261	ILMN_219261	TDRD7	NM_146142.1	NM_146142.1		100121	22122662	NM_146142.1	Tdrd7	NP_666254.1	ILMN_2818678	003180521	S	3188	GCTCTATCTCGTAGACACGTCGCTGCCCGACACTGACACCTGGATTCATG	4	+	46047295-46047344	4qB1	Mus musculus tudor domain containing 7 (Tdrd7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes [goid 43186] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC36668; 5730495N10Rik; PCTAIRE2BP; AI447470	MGC36668; 5730495N10Rik; PCTAIRE2BP; AI447470
Mus musculus	RefSeq	ILMN_222713	ILMN_261473	BANF2	NM_207275.1	NM_207275.1		403171	46402306	NM_207275.1	Banf2	NP_997158.1	ILMN_2753780	005570070	S	122	CCAAGGCATACCAATACGAACAGGAGGATAAGAAGGCAAACGAGAGAAGA	2	+	143888087-143888136	2qG1	Mus musculus barrier to autointegration factor 2 (Banf2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	RP23-17O9.1; Baf-L; Baf-like; Gm115	RP23-17O9.1; Baf-L; Baf-like; Gm115
Mus musculus	RefSeq	ILMN_198993	ILMN_198993	LOC380630	XM_354534.1	XM_354534.1			38090385	XM_354534.1	LOC380630		ILMN_1246869	007320647	S	206	GAGAAGATTGTGTATGGACACCTGCTGGGTGTCACTTTTGTCACAGGTCC										
Mus musculus	MEEBO	ILMN_186411	ILMN_186411	GABPB1	scl000032.1_60				46575941	NM_207669	Gabpb1		ILMN_2435325	006330465	S	20	TGCACAGGGCGCTATTTTCCGAAAATGCCGCGTCTGCTCGGCGCCCAAAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	MEEBO	ILMN_186411	ILMN_186411	GABPB1	scl000032.1_60				46575941	NM_207669	Gabpb1		ILMN_2646380	004070598	S	866	TGGTGCAATTCAGCAAGTAGTTAGCTCAGGGGGTCAGCAAGTCATCACGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_247169	ILMN_247169	ZDHHC23	NM_001007460.1	NM_001007460.1		332175	55925619	NM_001007460.1	Zdhhc23	NP_001007461.1	ILMN_3162286	004390138	S	1159	CTCCTCTGCGGGCTCATCGTGGACACAGGCCAGTACAACAGGGGCTTCCT	16	-	43969328-43969377	16qB4	Mus musculus zinc finger, DHHC domain containing 23 (Zdhhc23), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm779; Gm1751; nidd	Gm779; Gm1751; nidd
Mus musculus	Riken	ILMN_203141	ILMN_203141	EPB4.1L3	ri|5930417L10|PX00055G09|AK031156|3030					AK031156	Epb4.1l3		ILMN_2555027	006290736	S	2282	CAAAAGTGGACCAGGCGGGGAGGAAAGAGAGGTAGACAGTGATTCTCCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_204189	ILMN_204189	C730040K02RIK	ri|C730040K02|PX00087B15|AK050354|2198					AK050354	C730040K02Rik		ILMN_1257418	007650528	S	1937	TGCATCCAGGGAGACAGATCCCAATGACAACTGGGGCCAGGCATGAGGCA										
Mus musculus	RefSeq	ILMN_200252	ILMN_200252	LOC386071	XM_359055.1	XM_359055.1			38081113	XM_359055.1	LOC386071		ILMN_1229022	006330148	S	206	GTGGTGAAAGAGGAAAACTCCTCCATTGTTGGCTTGTACAACCACTCTGG										
Mus musculus	Riken	ILMN_202672	ILMN_202672	B230113H14RIK	ri|B230113H14|PX00068O04|AK020974|1057					AK020974	B230113H14Rik		ILMN_1218497	002370372	S	816	GGTCAAAAGGCTCCACCCCAGTTGGTCTCCTTCTCAGTGGCAGCAAGGTC										
Mus musculus	RefSeq	ILMN_219606	ILMN_219606	OLFR1370	NM_146535.1	NM_146535.1		258528	33238957	NM_146535.1	Olfr1370	NP_666746.1	ILMN_1226930	004610687	S	739	GTCGTGACTCTTTTCTATGGACCAGTAATTAGCATGTACGTACAACCCTC	13	-	21164380-21164429	13qA2	Mus musculus olfactory receptor 1370 (Olfr1370), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123746; MOR256-14	MGC123746; MOR256-14
Mus musculus	MEEBO	ILMN_185903	ILMN_185903	9629553_1930	9629553_1930						9629553_1930		ILMN_1220018	003140309	S	1	GGCCACATGCTATTTAAATGCACCAGAAATAAAAAGTATGACACCATTGC										
Mus musculus	RefSeq	ILMN_220655	ILMN_220655	PTH2	NM_053256.1	NM_053256.1		114640	16716586	NM_053256.1	Pth2	NP_444486.1	ILMN_2965773	000360598	S	367	CTGGCTGGACTCTTACATGCAGAAGCTGTTGCTACTGGACGCGCCCTGAG	7	+	52437094-52437142:52437143-52437143	7qB4	Mus musculus parathyroid hormone 2 (Pth2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	TIP39	TIP39
Mus musculus	RefSeq	ILMN_221080	ILMN_255657	LRRC51	XM_890234.2	XM_890234.2		69358	94380867	XM_890234.2	Lrrc51	XP_895327.1	ILMN_1258770	005860338	S	453	TCTGGCCTGGATTGACCTCTCCTTCAATGACCTGACTACCATTGACCCTG	7	-	109062096-109062097:109064076-109064123	7qE3	PREDICTED: Mus musculus leucine rich repeat containing 51, transcript variant 2 (Lrrc51), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223426	ILMN_223426	LSM4	NM_015816.1	NM_015816.1		50783	7657316	NM_015816.1	Lsm4	NP_056631.1	ILMN_2903511	006040427	S	693	GCTCAGCCCATGGCGGCTCACCTGTCCTTTACCAGCCATACCCTGTACAT	8	+	73607653-73607702	8qB3.3	Mus musculus LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence ISS]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198611	ILMN_198611	LOC331453	XM_288109.1	XM_288109.1			28528694	XM_288109.1	LOC331453		ILMN_1255983	004830470	S	407	TGAACAGGTGGTCATCCCACAGTGAGTGTCAAAGACAGGATGCTGGAATG										
Mus musculus	RefSeq	ILMN_213825	ILMN_213825	OLFR1026	NM_146584.2	NM_146584.2		258577	121583708	NM_146584.2	Olfr1026	NP_666795.2	ILMN_2641178	000940593	S	757	GGAACATTGTTCTGCATGCACCTGAGGCCCCCCTCTGAGACATCTGTAGA	2	+	85764183-85764232	2qD	Mus musculus olfactory receptor 1026 (Olfr1026), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR196-4	MOR196-4
Mus musculus	RefSeq	ILMN_194885	ILMN_194210	SLC1A5	NM_009201.2	NM_009201.2		20514	114326473	NM_009201.2	Slc1a5	NP_033227.2	ILMN_2510521	006940148	S	690	CCGGTCACGGGAACCGCAGCAACCACCTGCTTTCGCACTCTGGTCCTCTC	7	+	17367384-17367433	7qA2	Mus musculus solute carrier family 1 (neutral amino acid transporter), member 5 (Slc1a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [evidence IDA]	M7V1; ATBO; ASCT2; MGC46952; AAAT; R16; M7VS1; Slc1a7; RDRC	M7V1; ATBO; ASCT2; MGC46952; AAAT; R16; M7VS1; Slc1a7; RDRC
Mus musculus	RefSeq	ILMN_194210	ILMN_194210	SLC1A5	NM_009201.2	NM_009201.2		20514	114326473	NM_009201.2	Slc1a5	NP_033227.2	ILMN_2593148	001190717	S	637	TCCAGAGAGGACCAGAGTGCGAAAGCAGGTGGTTGCTGCGGTTCCCGTGA	7	+	17367331-17367380	7qA2	Mus musculus solute carrier family 1 (neutral amino acid transporter), member 5 (Slc1a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [evidence IDA]	M7V1; ATBO; ASCT2; MGC46952; AAAT; R16; M7VS1; Slc1a7; RDRC	M7V1; ATBO; ASCT2; MGC46952; AAAT; R16; M7VS1; Slc1a7; RDRC
Mus musculus	RefSeq	ILMN_194210	ILMN_194210	SLC1A5	NM_009201.2	NM_009201.2		20514	114326473	NM_009201.2	Slc1a5	NP_033227.2	ILMN_2776585	004890324	S	621	TGGCCCCGCGCTGGGATCCAGAGAGGACCAGAGTGCGAAAGCAGGTGGTT	7	+	17367315-17367364	7qA2	Mus musculus solute carrier family 1 (neutral amino acid transporter), member 5 (Slc1a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [evidence IDA]	M7V1; ATBO; ASCT2; MGC46952; AAAT; R16; M7VS1; Slc1a7; RDRC	M7V1; ATBO; ASCT2; MGC46952; AAAT; R16; M7VS1; Slc1a7; RDRC
Mus musculus	RefSeq	ILMN_194469	ILMN_194210	SLC1A5	NM_009201.2	NM_009201.2		20514	114326473	NM_009201.2	Slc1a5	NP_033227.2	ILMN_2506699	001470504	S	663	TGCTTTCGCACTCTGGTCCTCTCTGGATCCCAGCGCGGGGCCACCGTTCG	7	+	17367357-17367406	7qA2	Mus musculus solute carrier family 1 (neutral amino acid transporter), member 5 (Slc1a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [evidence IDA]	M7V1; ATBO; ASCT2; MGC46952; AAAT; R16; M7VS1; Slc1a7; RDRC	M7V1; ATBO; ASCT2; MGC46952; AAAT; R16; M7VS1; Slc1a7; RDRC
Mus musculus	RefSeq	ILMN_210138	ILMN_212504	SH3RF1	NM_021506.2	NM_021506.2		59009	114145506	NM_021506.2	Sh3rf1	NP_067481.2	ILMN_2602597	003290008	S	5056	GGATGTTGTAACAAGGGCTTGTCACACCGTGGTGGGGATGAGAAGTCGAC	8	+	63874744-63874793	8qB3.1	Mus musculus SH3 domain containing ring finger 1 (Sh3rf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IDA]	Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Sh3md2; 2200003J05Rik; R75531; Posh	Sh3md2; 2200003J05Rik; R75531; Posh
Mus musculus	RefSeq	ILMN_210138	ILMN_212504	SH3RF1	NM_021506.2	NM_021506.2		59009	114145506	NM_021506.2	Sh3rf1	NP_067481.2	ILMN_2711279	002060451	S	3007	GTTTCATAGAAAGAGCACATCTGTGGACTTCCAGATCTTCAAGAACCGAG	8	+	63872695-63872744	8qB3.1	Mus musculus SH3 domain containing ring finger 1 (Sh3rf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IDA]	Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Sh3md2; 2200003J05Rik; R75531; Posh	Sh3md2; 2200003J05Rik; R75531; Posh
Mus musculus	RefSeq	ILMN_212504	ILMN_212504	SH3RF1	NM_021506.2	NM_021506.2		59009	114145506	NM_021506.2	Sh3rf1	NP_067481.2	ILMN_2627254	000130041	S	772	GATGAGAATTGGTACCACGGGGAAGTCAGCGGGGTCCACGGCTTTTTCCC	8	+	63808124-63808173	8qB3.1	Mus musculus SH3 domain containing ring finger 1 (Sh3rf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IDA]	Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Sh3md2; 2200003J05Rik; R75531; Posh	Sh3md2; 2200003J05Rik; R75531; Posh
Mus musculus	RefSeq	ILMN_212127	ILMN_212127	CLSPN	NM_175554.3	NM_175554.3		269582	34330171	NM_175554.3	Clspn	NP_780763.2	ILMN_1241320	006980315	S	491	CCACCAGACAGGACACTCTGTGGACTTCACCACCGGCAGAAAGCTCTCCA	4	+	126237431-126237480	4qD2.2	Mus musculus claspin homolog (Xenopus laevis) (Clspn), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A signal transduction based surveillance mechanism that prevents the initiation of mitosis until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome [goid 76] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA containing secondary structure elements such as four-way junctions, bubbles, loops, Y-form DNA, or double-strand/single-strand junctions [goid 217] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	E130314M08Rik; C85083; CLASPIN; B130025E01	E130314M08Rik; C85083; CLASPIN; B130025E01
Mus musculus	RefSeq	ILMN_212127	ILMN_212127	CLSPN	NM_175554.3	NM_175554.3		269582	34330171	NM_175554.3	Clspn	NP_780763.2	ILMN_2623056	002600019	S	4660	GGCTTCAGTGTCGAAAGCTGAGCGTGAGAAGTTGGATGAGGTTGTGTCCG	4	+	126270870-126270919	4qD2.2	Mus musculus claspin homolog (Xenopus laevis) (Clspn), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A signal transduction based surveillance mechanism that prevents the initiation of mitosis until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome [goid 76] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA containing secondary structure elements such as four-way junctions, bubbles, loops, Y-form DNA, or double-strand/single-strand junctions [goid 217] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	E130314M08Rik; C85083; CLASPIN; B130025E01	E130314M08Rik; C85083; CLASPIN; B130025E01
Mus musculus	RefSeq	ILMN_212127	ILMN_212127	CLSPN	NM_175554.3	NM_175554.3		269582	34330171	NM_175554.3	Clspn	NP_780763.2	ILMN_2858359	007570278	S	4665	CAGTGTCGAAAGCTGAGCGTGAGAAGTTGGATGAGGTTGTGTCCGTCCTT	4	+	126270875-126270924	4qD2.2	Mus musculus claspin homolog (Xenopus laevis) (Clspn), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A signal transduction based surveillance mechanism that prevents the initiation of mitosis until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome [goid 76] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA containing secondary structure elements such as four-way junctions, bubbles, loops, Y-form DNA, or double-strand/single-strand junctions [goid 217] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	E130314M08Rik; C85083; CLASPIN; B130025E01	E130314M08Rik; C85083; CLASPIN; B130025E01
Mus musculus	RefSeq	ILMN_212127	ILMN_212127	CLSPN	NM_175554.3	NM_175554.3		269582	34330171	NM_175554.3	Clspn	NP_780763.2	ILMN_2690319	007650309	S	3509	ACAGCTTGACGAGACCGAAGCCAAGTGGAGGAAGGAACGGATTGAGCGAG	4	+	126264860-126264909	4qD2.2	Mus musculus claspin homolog (Xenopus laevis) (Clspn), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A signal transduction based surveillance mechanism that prevents the initiation of mitosis until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome [goid 76] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA containing secondary structure elements such as four-way junctions, bubbles, loops, Y-form DNA, or double-strand/single-strand junctions [goid 217] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	E130314M08Rik; C85083; CLASPIN; B130025E01	E130314M08Rik; C85083; CLASPIN; B130025E01
Mus musculus	RefSeq	ILMN_207452	ILMN_207452	PXN	NM_133915.2	NM_133915.2		19303	114326501	NM_133915.2	Pxn	NP_598676.2	ILMN_3047586	000610167	I	989	CAGGGCCTGGAACAGAGAGTGGATGGAGAGCGGCCGTGGGCAGCCAGCTG	5	+	116001500-116001549	5qF	Mus musculus paxillin (Pxn), transcript variant beta, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence TAS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]	Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with the BH4 domain of a protein of the Bcl-2 family. All anti-apoptotic proteins contain BH1 and BH2 domains; some also contain an additional N-terminal BH4 domain, which is almost never seen in pro-apoptotic proteins. Loss of the BH4 domain can diminish or abrogate anti-apoptotic function or even impart outright death-promoting properties to the protein [goid 51435] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW123232; AW108311	AW123232; AW108311
Mus musculus	RefSeq	ILMN_207452	ILMN_207452	PXN	NM_133915.2	NM_133915.2		19303	114326501	NM_133915.2	Pxn	NP_598676.2	ILMN_3123303	001090471	A	2913	CCTGGAGTTTTGAACCTCACGTGTCCTGTTCCCAAGGCAGGCAAAGGGGA	5	+	116005127-116005176	5qF	Mus musculus paxillin (Pxn), transcript variant beta, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence TAS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]	Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with the BH4 domain of a protein of the Bcl-2 family. All anti-apoptotic proteins contain BH1 and BH2 domains; some also contain an additional N-terminal BH4 domain, which is almost never seen in pro-apoptotic proteins. Loss of the BH4 domain can diminish or abrogate anti-apoptotic function or even impart outright death-promoting properties to the protein [goid 51435] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW123232; AW108311	AW123232; AW108311
Mus musculus	RefSeq	ILMN_191673	ILMN_191673	TNFRSF13C	NM_028075.2	NM_028075.2		72049	118130430	NM_028075.2	Tnfrsf13c	NP_082351.1	ILMN_2481170	002710520	S	1578	GGTGACTAAGAGGAGGTAAAGCCATCAGGACTGAGCCCCTAACATACAAG	15	-	82052452-82052501	15qE1	Mus musculus tumor necrosis factor receptor superfamily, member 13c (Tnfrsf13c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the B cell receptor to augment B cell activation [goid 31296] [evidence IDA]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of germinal center formation [goid 2636] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Bcmd-1; MGC123890; Bcmd; Baffr; Bcmd1; MGC123891; BAFF-R; Lvis22; 2010006P15Rik	Bcmd-1; MGC123890; Bcmd; Baffr; Bcmd1; MGC123891; BAFF-R; Lvis22; 2010006P15Rik
Mus musculus	RefSeq	ILMN_214956	ILMN_315419	LOC100048020	XM_001479635.1	XM_001479635.1		100048020	149253222	XM_001479635.1	LOC100048020	XP_001479685.1	ILMN_2653881	003780544	S	3616	GTGCGAAGGTGACTGCTGTTTGGGGAGTAGGAAAATAAATGTGTACCTGC					PREDICTED: Mus musculus similar to RIKEN cDNA 0610009K11 gene (LOC100048020), mRNA.					
Mus musculus	MEEBO	ILMN_218496	ILMN_218496	OLFR1333	scl0258265.1_117				46391066	NM_207157	Olfr1333		ILMN_2696546	002750180	S	284	TGCTAGTTGCTGCCTGCAGATGTTTGTTTTTGGTGCCCTGGGTATAACTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	Riken	ILMN_201954	ILMN_201954	0610007L01RIK	ri|0610007L01|R000001M10|AK002297|1310					AK002297	0610007L01Rik		ILMN_1243193	003520577	S	1104	ATTTTGCCCTGAGAAGGTGGCTCTCGTGACGCCTAATCCTACAGCTCCCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_214875	ILMN_214875	CTSC	NM_009982.2	NM_009982.2		13032	31560606	NM_009982.2	Ctsc	NP_034112.2	ILMN_3008858	001710754	S	2245	GCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTATATGCTTGGGC	7	+	88185882-88185931	7qE1	Mus musculus cathepsin C (Ctsc), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	DPP1; AI047818; DPPI	DPP1; AI047818; DPPI
Mus musculus	RefSeq	ILMN_214875	ILMN_214875	CTSC	NM_009982.2	NM_009982.2		13032	31560606	NM_009982.2	Ctsc	NP_034112.2	ILMN_3008859	000990246	S	2039	GCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGATCTGTGTCAGAA	7	+	88185676-88185725	7qE1	Mus musculus cathepsin C (Ctsc), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	DPP1; AI047818; DPPI	DPP1; AI047818; DPPI
Mus musculus	RefSeq	ILMN_208690	ILMN_208690	CHMP7	NM_134078.3	NM_134078.3		105513	141801415	NM_134078.3	Chmp7	NP_598839.2	ILMN_2588610	006280356	S	2539	AAAGAGTCTCTCCCACTCAGCCTTGGCAATGGAAATAGCTGGGGGTGAAG	14	-	70116866-70116915	14qD2	Mus musculus CHMP family, member 7 (Chmp7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AW550775; 4930596K11Rik; 6330407G04Rik; AI450338; MGC29816	AW550775; 4930596K11Rik; 6330407G04Rik; AI450338; MGC29816
Mus musculus	RefSeq	ILMN_208690	ILMN_208690	CHMP7	NM_134078.3	NM_134078.3		105513	141801415	NM_134078.3	Chmp7	NP_598839.2	ILMN_2750098	005890390	S	923	ACGCATTGAGGCCCTGCATGCCAAGCTGGACACTGTTCAAGGCATCCTGG	14	-	70119586-70119635	14qD2	Mus musculus CHMP family, member 7 (Chmp7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AW550775; 4930596K11Rik; 6330407G04Rik; AI450338; MGC29816	AW550775; 4930596K11Rik; 6330407G04Rik; AI450338; MGC29816
Mus musculus	RefSeq	ILMN_216779	ILMN_216779	5730437N04RIK	NM_027457.4	NM_027457.4		70544	146134493	NM_027457.4	5730437N04Rik	NP_081733.3	ILMN_1218627	000520598	S	294	GGGGTTCTCTTTATGCCTGGTGTGGAGTTGGTGTGATCAGCTTTGCAGTG				17qA1	Mus musculus RIKEN cDNA 5730437N04 gene (5730437N04Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110008A10Rik; 2310046K16Rik	1110008A10Rik; 2310046K16Rik
Mus musculus	MEEBO	ILMN_186725	ILMN_186725	IFI205	scl000902.1_10				31982555	NM_172648	Ifi205		ILMN_2437969	007400528	S	7	CTGAGAGTGTCCTAACCACTGGTGTCTTCATTTATACCCCATTTTTCACT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218735	ILMN_228359	1500016O10RIK	XM_924242.3	XM_924242.3		68952	149258098	XM_924242.3	1500016O10Rik	XP_929335.1	ILMN_1223522	005860541	S	700	GTCAACCTGGGCGCCGCACTGCTCCTCGCACCCCAGCTCTACTGGTTCTT				7qF3	PREDICTED: Mus musculus RIKEN cDNA 1500016O10 gene, transcript variant 2 (1500016O10Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_203521	ILMN_203521	6330532E14RIK	ri|6330532E14|PX00043E24|AK031993|3245					AK031993	6330532E14Rik		ILMN_1220218	006180471	S	3009	ACCCTATTGGAGCTGCAGAGCAAGAGAAACAAGATGAGACAGGGCAGGCC										
Mus musculus	RefSeq	ILMN_219186	ILMN_320435	LOC676420	XR_031436.1	XR_031436.1		676420	149267025	XR_031436.1	LOC676420		ILMN_2749958	001190377	S	3813	CCTCCTGGTCTTGCTGGCTTCAAGATTAGAAAGTGGCATATTTGATCTGG					PREDICTED: Mus musculus similar to ceramide kinases (LOC676420), misc RNA.					
Mus musculus	RefSeq	ILMN_219186	ILMN_320435	LOC676420	XR_031436.1	XR_031436.1		676420	149267025	XR_031436.1	LOC676420		ILMN_2705384	005960209	S	1122	GGGAGATGGGTCTTCTGACCTCATCCTTATCCGGAAGTGCTCCAGGTTCA					PREDICTED: Mus musculus similar to ceramide kinases (LOC676420), misc RNA.					
Mus musculus	RefSeq	ILMN_217509	ILMN_217509	EGF	NM_010113.2	NM_010113.2		13645	142375391	NM_010113.2	Egf	NP_034243.1	ILMN_2684104	004570754	S	4367	GTGATCTACATAGAAGTCTTAGCTCACTCTCAGGAACGCTTGGAACACTA	3	-	129380827-129380876	3qG3	Mus musculus epidermal growth factor (Egf), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IGI]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]; The process that activates or increases the rate or extent of granule cell precursor proliferation [goid 21940] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI790464	AI790464
Mus musculus	RefSeq	ILMN_210529	ILMN_210529	D430041B17RIK	NM_172737.2	NM_172737.2		232813	141801715	NM_172737.2	D430041B17Rik	NP_766325.1	ILMN_2606540	000940242	S	2222	TCCTTCTCAGAGGTGTTCCCCACTCTAGATGACCAACAGTAGTGACTGCA	7	-	4780106-4780155	7qA1	Mus musculus RIKEN cDNA D430041B17 gene (D430041B17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209397	ILMN_209397	FAM163B	NM_175427.3	NM_175427.3		109349	142359024	NM_175427.3	Fam163b	NP_780636.1	ILMN_2595441	001500187	S	540	AACGGGCCTGCTCTCTACCCAGCTGCCACCACCTCTTTCAGCCAAAAGTC	2	-	26968252-26968301	2qA3	Mus musculus family with sequence similarity 163, member B (Fam163b), mRNA.					
Mus musculus	Riken	ILMN_204308	ILMN_204308	PROM	ri|4931440N24|PX00017H21|AK029921|3407					AK029921	Prom		ILMN_1249786	002480132	S	3150	TGGATTCAGAGGATGTATACGACGACCCGTCTCGATACTGACAACTGGAG										
Mus musculus	Riken	ILMN_206970	ILMN_206970	4930543E05RIK	ri|4930543E05|PX00640M20|AK076899|767					AK076899	4930543E05Rik		ILMN_2584057	000610224	S	420	GCGGTTCCCACAGACCGAGGCTCTCAAGGCAGTCTACTGCCGGGTCTCCT										
Mus musculus	RefSeq	ILMN_213347	ILMN_229871	LIMK2	NM_001034030.1	NM_001034030.1		16886	77404364	NM_001034030.1	Limk2	NP_001029202.1	ILMN_2636169	003060681	S	2849	TGAGTATGCTTGCACTGTCCCCAGCAAGTGTGGGAGTGGGGCCTGCACTA	11	-	3244299-3244348	11qA1	Mus musculus LIM motif-containing protein kinase 2 (Limk2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Limk2b; C85310; A930024P04Rik; 9430059K01; Limk2a	Limk2b; C85310; A930024P04Rik; 9430059K01; Limk2a
Mus musculus	RefSeq	ILMN_212346	ILMN_212346	KCNK4	NM_008431.2	NM_008431.2		16528	141803210	NM_008431.2	Kcnk4	NP_032457.1	ILMN_2625370	006370243	S	1489	GCTGATGCTCAGGCATGCTTGGCTTATTTGACCAAAGAGCCGTCCCTCTT	19	-	7000376-7000425	19qA	Mus musculus potassium channel, subfamily K, member 4 (Kcnk4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	TRAAK; MGC144821; TRAAKt	TRAAK; MGC144821; TRAAKt
Mus musculus	RefSeq	ILMN_212346	ILMN_212346	KCNK4	NM_008431.2	NM_008431.2		16528	141803210	NM_008431.2	Kcnk4	NP_032457.1	ILMN_1226370	001050333	S	50	CGTTGGGGCCCCAATCCCAGCCTGGAAGGTTGGACTTCACGTCGACCCTT	19	-	7008906-7008955	19qA	Mus musculus potassium channel, subfamily K, member 4 (Kcnk4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	TRAAK; MGC144821; TRAAKt	TRAAK; MGC144821; TRAAKt
Mus musculus	RefSeq	ILMN_188735	ILMN_232201	DACT2	NM_172826.2	NM_172826.2		240025	31982103	NM_172826.2	Dact2	NP_766414.2	ILMN_2697012	002340047	S	2632	TGGTGTGATGGCAGTGTTTCAGGACAAGCCTAGGACCCCAGAAGGTGCCA	17	-	14332627-14332669:14332670-14332676	17qA2	Mus musculus dapper homolog 2, antagonist of beta-catenin (xenopus) (Dact2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Frd2; 2900084M21Rik; dapper2; A630024E20	Frd2; 2900084M21Rik; dapper2; A630024E20
Mus musculus	Riken	ILMN_206597	ILMN_206597	E030017C01RIK	ri|E030017C01|PX00205E07|AK086976|4310					AK086976	E030017C01Rik		ILMN_2581279	001690725	S	3959	CAGCGGTATTGAAAAGGGATATCTTTGGAGCATCTTTGGCTACTATGGCT										
Mus musculus	MEEBO	ILMN_185030	ILMN_185030	4930569F06RIK	scl27337.1.2_277						4930569F06Rik		ILMN_2423600	001430040	S	4	CAGATTTATCGGAAGACCTAGCCAGGAAGATGGGGCAGAGAGGGGCTCCT										
Mus musculus	Riken	ILMN_206444	ILMN_206444	C230067J07RIK	ri|C230067J07|PX00175O18|AK082594|3116					AK082594	C230067J07Rik		ILMN_1256779	004560500	S	2430	TCACTGAGGGAGTCAGGGAAAGGAGCTCAAGGCAGGCACCTGGAGGCAGG										
Mus musculus	RefSeq	ILMN_211978	ILMN_211978	PARP1	NM_007415.2	NM_007415.2		11545	20806108	NM_007415.2	Parp1	NP_031441.2	ILMN_1222228	006420551	S	2264	CTTCTACACTCTGATCCCCCATGACTTTGGAATGAAGAAGCCCCCACTCC	1	+	182524224-182524273	1qH4	Mus musculus poly (ADP-ribose) polymerase family, member 1 (Parp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; Any process that modulates the rate of growth of all or part of an organism [goid 40009] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]	C80510; Adprp; sPARP-1; PARP; AI893648; Adprt1; 5830444G22Rik; PPOL; parp-1	C80510; Adprp; sPARP-1; PARP; AI893648; Adprt1; 5830444G22Rik; PPOL; parp-1
Mus musculus	RefSeq	ILMN_211978	ILMN_211978	PARP1	NM_007415.2	NM_007415.2		11545	20806108	NM_007415.2	Parp1	NP_031441.2	ILMN_2621385	006980010	S	3258	TAAAGGGCTCTGGTTTCAAGTCCCTTGTCCATGCTGCACTGGGGCAGGCC	1	+	182530816-182530865	1qH4	Mus musculus poly (ADP-ribose) polymerase family, member 1 (Parp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; Any process that modulates the rate of growth of all or part of an organism [goid 40009] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]	C80510; Adprp; sPARP-1; PARP; AI893648; Adprt1; 5830444G22Rik; PPOL; parp-1	C80510; Adprp; sPARP-1; PARP; AI893648; Adprt1; 5830444G22Rik; PPOL; parp-1
Mus musculus	RefSeq	ILMN_211978	ILMN_211978	PARP1	NM_007415.2	NM_007415.2		11545	20806108	NM_007415.2	Parp1	NP_031441.2	ILMN_2971744	005820593	S	3417	GAAACACCACGTCACAGTCACGATGTCTGCCTTACTGGCTTCCCCAGGGA	1	+	182530975-182531024	1qH4	Mus musculus poly (ADP-ribose) polymerase family, member 1 (Parp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; Any process that modulates the rate of growth of all or part of an organism [goid 40009] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]	C80510; Adprp; sPARP-1; PARP; AI893648; Adprt1; 5830444G22Rik; PPOL; parp-1	C80510; Adprp; sPARP-1; PARP; AI893648; Adprt1; 5830444G22Rik; PPOL; parp-1
Mus musculus	RefSeq	ILMN_188776	ILMN_229940	9430031J16RIK	NM_172849.3	NM_172849.3		241134	118129943	NM_172849.3	9430031J16Rik	NP_766437.2	ILMN_3162775	003190349	I	4554	CTCTTTCTAGACCTTCACTGGATACATGGCGCTTGCTCACACTGGTGAGG	1	+	81267874-81267923	1qC5	Mus musculus RIKEN cDNA 9430031J16 gene (9430031J16Rik), mRNA.				Jr6; MGC90544	Jr6; MGC90544
Mus musculus	Riken	ILMN_204224	ILMN_204224	A730050C11RIK	ri|A730050C11|PX00151C18|AK043043|485					AK043043	A730050C11Rik		ILMN_1254200	003400121	S	120	GTTGCCACTGGACCATGAGGAGGCAGAAGGAAAATCAAGTGGGTTCCATC										
Mus musculus	MEEBO	ILMN_195884	ILMN_195884	CDYL	scl44909.12_283				6753397	NM_009881	Cdyl		ILMN_2519652	007210360	S	3	ATTCTCTTGGCACACTATTAAATACGTAAACTCCTTTCAGAACAGAAAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214011	ILMN_214011	MRPL3	NM_053159.3	NM_053159.3		94062	118131171	NM_053159.3	Mrpl3	NP_444389.2	ILMN_1231390	000160370	S	379	AAACTGAATCCCTTGAAAGATGAGCCGTGGCCTTTACATCCCTGGGAACC	9	+	104956884-104956933	9qF1	Mus musculus mitochondrial ribosomal protein L3 (Mrpl3), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5930422H18Rik; 2010320L16Rik; AA407889	5930422H18Rik; 2010320L16Rik; AA407889
Mus musculus	RefSeq	ILMN_214011	ILMN_214011	MRPL3	NM_053159.3	NM_053159.3		94062	118131171	NM_053159.3	Mrpl3	NP_444389.2	ILMN_2643264	005560672	S	1195	GCCTGATGCCCGGGTGTGGCAGGACTCTGTGCTTCGTGCACTTTGATGAA	9	+	104979470-104979475:104979476-104979519	9qF1	Mus musculus mitochondrial ribosomal protein L3 (Mrpl3), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5930422H18Rik; 2010320L16Rik; AA407889	5930422H18Rik; 2010320L16Rik; AA407889
Mus musculus	MEEBO	ILMN_220024	ILMN_220024	D330046F09RIK	scl45657.4.1_190	XM_286602.1			28478068	XM_286602.1	D330046F09Rik		ILMN_2716593	002490451	S	832	TGGTCTGTGATTGTTCTGCAAAATAGCATGTGCCCTTTCCTTGGCTCTGG										
Mus musculus	RefSeq	ILMN_222858	ILMN_222858	LRRC3B	NM_146052.3	NM_146052.3		218763	141803533	NM_146052.3	Lrrc3b	NP_666164.1	ILMN_2755833	002360563	S	1184	GCCAAGCAGGCAAAAGAAGGCAGATGAGCCTGATGACATTAGCACTGTGG	14	-	16190343-16190392	14qA2	Mus musculus leucine rich repeat containing 3B (Lrrc3b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LRP15; MGC30505; BC019794	LRP15; MGC30505; BC019794
Mus musculus	RefSeq	ILMN_210032	ILMN_210032	ABP1	NM_029638.1	NM_029638.1		76507	22095012	NM_029638.1	Abp1	NP_083914.1	ILMN_2601519	004040504	S	2449	GGGCTGGCTCTACTCCTGTTTTATTACCATACCTGCCAAAGACTTCCATG	6	+	48853918-48853967	6qB2.3	Mus musculus amiloride binding protein 1 (amine oxidase, copper-containing) (Abp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [evidence IEA]; The directed movement amiloride into, out of, within or between cells. Amiloride is a potent and specific inhibitor of sodium ion entry into cells. It is used as a potassium-sparing diuretic [goid 15898] [evidence ISO]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds [goid 48038] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence ISO]	1600012D06Rik; DAO	1600012D06Rik; DAO
Mus musculus	RefSeq	ILMN_211194	ILMN_225095	5730455O13RIK	NM_001081075.1	NM_001081075.1		70567	124486728	NM_001081075.1	5730455O13Rik	NP_001074544.1	ILMN_2613492	005420484	S	1289	CTGGTTTTGGCTCTAGCTCTACAGTTTATGGTATACTTGTTTCAAGTGTC	19	-	38263028-38263077	19qC3	Mus musculus RIKEN cDNA 5730455O13 gene (5730455O13Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Fra10ac1; AI448293	Fra10ac1; AI448293
Mus musculus	MEEBO	ILMN_191407	ILMN_191407	AW212394	scl16778.9_627				19527045	NM_133829	AW212394		ILMN_1240938	005340762	S	1	GCGTCGATCCAACAGTGCAGTAATTTCTAGCCTTTTGAGCTGACACCTTC										
Mus musculus	RefSeq	ILMN_221396	ILMN_221396	LRFN1	NM_030562.1	NM_030562.1		80749	13385437	NM_030562.1	Lrfn1	NP_085039.1	ILMN_2734991	003990639	S	1464	GCCAGTGCCTGGCATCCGTATGTACCAAGTGCAATACAACAGCTCTGCAG	7	+	29245014-29245063	7qA3	Mus musculus leucine rich repeat and fibronectin type III domain containing 1 (Lrfn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC004018; Semo1; SALM2; MGC7599	BC004018; Semo1; SALM2; MGC7599
Mus musculus	RefSeq	ILMN_219907	ILMN_219907	NPSR1	NM_175678.2	NM_175678.2		319239	31342310	NM_175678.2	Npsr1	NP_783609.1	ILMN_2848214	001340427	S	3321	CATGGGGGCAGAATGACAGTGGAGCAGAGGACATTGAGGTTTAGAGACTG	9	+	24066335-24066384	9qA3-qA4	Mus musculus neuropeptide S receptor 1 (Npsr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]	PGR14; Gpr154; 9330128H10Rik; VRR1; GPRA	PGR14; Gpr154; 9330128H10Rik; VRR1; GPRA
Mus musculus	RefSeq	ILMN_219907	ILMN_219907	NPSR1	NM_175678.2	NM_175678.2		319239	31342310	NM_175678.2	Npsr1	NP_783609.1	ILMN_2715057	004120209	S	3261	AGTCCTATGACCCTGGGTGAATCATGCTGTGTCTCTGGGCACCACTAGTC	9	+	24066275-24066324	9qA3-qA4	Mus musculus neuropeptide S receptor 1 (Npsr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]	PGR14; Gpr154; 9330128H10Rik; VRR1; GPRA	PGR14; Gpr154; 9330128H10Rik; VRR1; GPRA
Mus musculus	MEEBO	ILMN_217894	ILMN_217894	AW538212	scl00100978.1_170				38079273	XM_358354	AW538212		ILMN_2688996	000830382	S	2367	GTTAGTCTTTGCATCTATAGCACTTGATTCTTTTGGGTAGGCTACTTCTA										
Mus musculus	RefSeq	ILMN_202921	ILMN_328571	LOC637970	XR_033093.1	XR_033093.1		637970	149267804	XR_033093.1	LOC637970		ILMN_2553345	000510240	S	1513	GGGACAGCCACCATTGGCATGGTCTATACTCTGTGTGTCTATGTGCTCAG					PREDICTED: Mus musculus similar to type V P-type ATPase (LOC637970), misc RNA.					
Mus musculus	MEEBO	ILMN_212265	ILMN_212265	CYCT	scl19108.4.1_28	NM_009989.1			6753559	NM_009989.1	Cyct		ILMN_2624569	001940551	S	508	GTGAAGTAGTATTTCAGCTTCAAAATATTCGCTACCAGTTTCAAATATTG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 42743] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196801	ILMN_196801	LOC233710	XM_146031.1	XM_146031.1			20842806	XM_146031.1	LOC233710		ILMN_1214908	007150601	S	825	AGTGTGGATTCACTACATCTGGACTGTGAGAGTCATGCCATCCCGTCCTC										
Mus musculus	RefSeq	ILMN_223551	ILMN_223551	KCNE1L	NM_021487.1	NM_021487.1		66240	10946897	NM_021487.1	Kcne1l	NP_067462.1	ILMN_2765662	006290181	S	1345	AGTTATTACTGCAATGTATGTATGCTTCATTCAGGGCCAGTCATCCCTAG	X	-	138739347-138739396	XqF2	Mus musculus potassium voltage-gated channel, Isk-related family, member 1-like (Kcne1l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Mink; 1500015C14Rik; Kcne5	Mink; 1500015C14Rik; Kcne5
Mus musculus	RefSeq	ILMN_199362	ILMN_199362	MRPL9	NM_030116.2	NM_030116.2		78523	118130689	NM_030116.2	Mrpl9	NP_084392.1	ILMN_2679770	000450253	S	922	GGGCAGGTTCGCTGTGGTTGTCATCTCCTTCAGTGGTCATCGTAGCCAGC	3	+	94251951-94252000	3qF2.1	Mus musculus mitochondrial ribosomal protein L9 (Mrpl9), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	AA409733; 8030480E20Rik; L9mt; C330013D18Rik	AA409733; 8030480E20Rik; L9mt; C330013D18Rik
Mus musculus	RefSeq	ILMN_199362	ILMN_199362	MRPL9	NM_030116.2	NM_030116.2		78523	118130689	NM_030116.2	Mrpl9	NP_084392.1	ILMN_2534975	002350563	S	1038	TAGCCGTTCCATCTTTGGGAGAGTTGGTGGGAACAGGTGCAGGGGCCTAG	3	+	94252067-94252116	3qF2.1	Mus musculus mitochondrial ribosomal protein L9 (Mrpl9), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	AA409733; 8030480E20Rik; L9mt; C330013D18Rik	AA409733; 8030480E20Rik; L9mt; C330013D18Rik
Mus musculus	RefSeq	ILMN_244816	ILMN_244816	1110038D17RIK	NM_175133.1	NM_175133.1		68778	112181296	NM_175133.1	1110038D17Rik	NP_780342.1	ILMN_3000080	002690707	S	2722	CACTCAGACTTCTCAGCTCCTGTGCATCCCAGTGTAGGCTCTGAGGCCAC	10	-	74969951-74970000	10qC1	Mus musculus RIKEN cDNA 1110038D17 gene (1110038D17Rik), mRNA.					
Mus musculus	Riken	ILMN_205089	ILMN_205089	D630024B06RIK	ri|D630024B06|PX00197C12|AK052690|2966					AK052690	D630024B06Rik		ILMN_1220818	000770139	S	2414	GCTGTGAGCCACCTCTGTGGGTTCTGGAAACTAAACTGTAGTCCTGTAAG										
Mus musculus	MEEBO	ILMN_193000	ILMN_193000	IGHV1S14_K00707$X00161_IG_HEAVY_VARIABLE_1S14_164	IGHV1S14_K00707$X00161_Ig_heavy_variable_1S14_164						IGHV1S14_K00707$X00161_Ig_heavy_variable_1S14_164		ILMN_2493249	004260717	S	2	GCGAAGCAGAGGCCTGGACAAGGCCTTGAGTGGATTGGAGAGATTCATCC										
Mus musculus	RefSeq	ILMN_215214	ILMN_215214	ARHGAP5	NM_009706.2	NM_009706.2		11855	86262150	NM_009706.2	Arhgap5	NP_033836.2	ILMN_2656852	004850497	S	3511	GATAGTCAGAATCGAATTATTAAAATTCGAAACTCATTTGTAAATAACAC	12	+	53620574-53620623	12qC1	Mus musculus Rho GTPase activating protein 5 (Arhgap5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the size of a cell [goid 8361] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	p190-B	p190-B
Mus musculus	RefSeq	ILMN_201481	ILMN_201481	LOC382183	XM_356288.1	XM_356288.1			38094088	XM_356288.1	LOC382183		ILMN_2542452	002630243	S	181	TGGACTCTTCCCAGCACTTTTCAAGGAGGCCTTTGATGGCAGACATATCA										
Mus musculus	RefSeq	ILMN_206829	ILMN_255123	TSHZ2	NM_080455.1	NM_080455.1		228911	61097921	NM_080455.1	Tshz2	NP_536703.1	ILMN_1256408	005900762	S	2893	GCACAGCAAGTCACCCGAACACCACTCTCAGTTTGTAGCAGACGTGGATG	2	+	169712021-169712070	2qH3	Mus musculus teashirt zinc finger family member 2 (Tshz2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA4248; Zfp218; B830045G17; mKIAA4248; Tsh2; Sdccag33l; Mtsh2; teashirt2; 2900073F20Rik	KIAA4248; Zfp218; B830045G17; mKIAA4248; Tsh2; Sdccag33l; Mtsh2; teashirt2; 2900073F20Rik
Mus musculus	RefSeq	ILMN_194387	ILMN_255123	TSHZ2	NM_080455.1	NM_080455.1		228911	61097921	NM_080455.1	Tshz2	NP_536703.1	ILMN_1249039	006270008	S	4771	AGAAGTATGTTTTAAATCTAATAATTGTGGGTCCAAACCCCGGCGAAGAG	2	+	169713899-169713948	2qH3	Mus musculus teashirt zinc finger family member 2 (Tshz2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA4248; Zfp218; B830045G17; mKIAA4248; Tsh2; Sdccag33l; Mtsh2; teashirt2; 2900073F20Rik	KIAA4248; Zfp218; B830045G17; mKIAA4248; Tsh2; Sdccag33l; Mtsh2; teashirt2; 2900073F20Rik
Mus musculus	MEEBO	ILMN_188332	ILMN_188332	AI661453	scl0106635.1_0						AI661453		ILMN_1240059	002490497	S	1	TCAAGAAACGCTTGTACGTCGGGGAGTCCCATCGCAACCCCGGGATGCCC										
Mus musculus	MEEBO	ILMN_187741	ILMN_187741	DDHD1	scl45663.15_583				31341146	NM_176845	Ddhd1		ILMN_2446727	003940743	S	9	CTCCCTCCGCCTTTGTTTGAACAGGGTGGTTCCATGCTTAGGATTGTCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223253	ILMN_223253	LIN37	NM_029377.2	NM_029377.2		75660	142374894	NM_029377.2	Lin37	NP_083653.1	ILMN_2761445	006520082	S	949	CAACCCACACTGGCCAGGCCATCGTTCCTGGCCCAGACATAAGGCAGTTG				7qB1	Mus musculus lin-37 homolog (C. elegans) (Lin37), mRNA.				1810054G18Rik	1810054G18Rik
Mus musculus	RefSeq	ILMN_213002	ILMN_213002	RPL31	NM_053257.1	NM_053257.1		114641	16716588	NM_053257.1	Rpl31	NP_444487.1	ILMN_3152328	004900348	A	60	TCTGCCATCAACGAGGTGGTGACCCGAGAATACACCATCAACATTCACAA	1	+	39312738-39312787	1qB	Mus musculus ribosomal protein L31 (Rpl31), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC106651; MGC107628	MGC106651; MGC107628
Mus musculus	RefSeq	ILMN_213002	ILMN_213002	RPL31	NM_053257.1	NM_053257.1		114641	16716588	NM_053257.1	Rpl31	NP_444487.1	ILMN_3073486	003420189	I	449	TCTGTTGTCTGCCTCATGGGTGGAATTTTTGGGTCTACAGGGTGTTGGAA	1	+	39315934-39315983	1qB	Mus musculus ribosomal protein L31 (Rpl31), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC106651; MGC107628	MGC106651; MGC107628
Mus musculus	Riken	ILMN_202606	ILMN_202606	E430021E22RIK	ri|E430021E22|PX00099M01|AK088602|828					AK088602	E430021E22Rik		ILMN_2550885	002810019	S	134	TCTGAGAAAGGTCCGCTTCAACCCTTGCTTTTCACAGCCAGCCTCCCGCC										
Mus musculus	MEEBO	ILMN_213719	ILMN_213719	H2-T22	scl015039.10_13	NM_010397.2			24475917	NM_010397.2	H2-T22		ILMN_2674284	004480685	S	1679	GATCAATGGCTTTGATGCAGAAAAGAACTGTGGACTAATAGAGATAGGGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200214	ILMN_200214	LOC385959	XM_359014.1	XM_359014.1			38080965	XM_359014.1	LOC385959		ILMN_1223966	003520168	S	35	GAAACCAAGACCACTCACCATCATCAGAACCCAGTACTCCTACTTCAGTC										
Mus musculus	RefSeq	ILMN_191272	ILMN_313600	KRTAP3-1	XM_001472357.1	XM_001472357.1		69473	149274264	XM_001472357.1	Krtap3-1	XP_001472407.1	ILMN_2477669	005900131	S	423	CTGCTTGCATCAAAGCTCAATCAACCCCAATGCCCAGAAACAGGGGCCCA				11qD	PREDICTED: Mus musculus keratin associated protein 3-1 (Krtap3-1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_210681	ILMN_210681	HDHD3	NM_024257.1	NM_024257.1		72748	21312203	NM_024257.1	Hdhd3	NP_077219.1	ILMN_2608145	007400292	S	742	TGTAGAACCTGCAGTGGCGGCCCACGTGGGGGATAGTTACCTCTGTGATT	4	-	62160379-62160428	4qB3	Mus musculus haloacid dehalogenase-like hydrolase domain containing 3 (Hdhd3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-phosphoglycolate + H2O = glycolate + phosphate [goid 8967] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	2810435D12Rik	2810435D12Rik
Mus musculus	MEEBO	ILMN_192064	ILMN_192064	SLC9A6	scl54920.17_335				27370157	NM_172780	Slc9a6		ILMN_2617843	000870255	S	340	TGGTAGGCCTCGTGCTTCGGTACGGCATTCATGTTCCAAGCGATGTGAAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193022	ILMN_232171	CDC2L5	NM_001081058.1	NM_001081058.1		69562	124486697	NM_001081058.1	Cdc2l5	NP_001074527.1	ILMN_1245824	006450711	S	6428	CCGCCCTCGCGTGCCGACTGACAATTTCAATTGTTGTAGTACCTTTCCCA	13	-	17808304-17808353	13qA2	Mus musculus cell division cycle 2-like 5 (cholinesterase-related cell division controller) (Cdc2l5), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	CDK13; 2310015O17Rik	CDK13; 2310015O17Rik
Mus musculus	RefSeq	ILMN_193022	ILMN_232171	CDC2L5	NM_001081058.1	NM_001081058.1		69562	124486697	NM_001081058.1	Cdc2l5	NP_001074527.1	ILMN_1220241	004760196	S	3702	GGTAAACTCTGAGACTCAACAGCAGCTAAATAAAATAAACCTTCCTGCTG	13	-	17811474-17811523	13qA2	Mus musculus cell division cycle 2-like 5 (cholinesterase-related cell division controller) (Cdc2l5), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	CDK13; 2310015O17Rik	CDK13; 2310015O17Rik
Mus musculus	RefSeq	ILMN_232171	ILMN_232171	CDC2L5	NM_001081058.1	NM_001081058.1		69562	124486697	NM_001081058.1	Cdc2l5	NP_001074527.1	ILMN_3118569	000620692	A	4820	CACAAGGATACAGGGGACACATTAGCACATCAGCTGGCAGAGGTCGAGGC	13	-	17809912-17809961	13qA2	Mus musculus cell division cycle 2-like 5 (cholinesterase-related cell division controller) (Cdc2l5), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	CDK13; 2310015O17Rik	CDK13; 2310015O17Rik
Mus musculus	RefSeq	ILMN_198253	ILMN_322083	LOC100048434	XR_034753.1	XR_034753.1		100048434	149254506	XR_034753.1	LOC100048434		ILMN_1256622	007040576	S	1492	CTGAAGAATGGCACTTACCTCTTGTCGTTCCCCCTGCTCTGGGCTGGACG					PREDICTED: Mus musculus similar to BC055004 protein (LOC100048434), misc RNA.					
Mus musculus	MEEBO	ILMN_217107	ILMN_217107	1700001C14RIK	scl000725.1_239	NM_029313.1			21746174	NM_029313.1	1700001C14Rik		ILMN_1227028	002030600	S	568	GAGCCATGAACCATGTTAATAAATTAGAGCATGTTTTTAACTTTTGGCCC										
Mus musculus	RefSeq	ILMN_217085	ILMN_228056	1700054F22RIK	XM_485380.4	XM_485380.4		73398	94371770	XM_485380.4	1700054F22Rik	XP_485380.4	ILMN_2678932	002060202	S	1002	CGACTGTCTTAGGAGCTGATGTGACATGTGTCAGGGGCCAGTGCTTCAAT	4	+	53013255-53013304	4qB2	PREDICTED: Mus musculus RIKEN cDNA 1700054F22 gene (1700054F22Rik), mRNA.					
Mus musculus	MEEBO	ILMN_208989	ILMN_208989	A130052D22	scl0330177.2_198	NM_183306.1			34303974	NM_183306.1	A130052D22		ILMN_2591502	003140279	S	1865	GGTGTGTTTCTTCCTCGTACATAGACTGGAGTTGCTGGTGAAGCGCCATG										
Mus musculus	RefSeq	ILMN_220018	ILMN_246133	SLC5A12	NM_001003915.1	NM_001003915.1		241612	51491855	NM_001003915.1	Slc5a12	NP_001003915.1	ILMN_1242165	005080082	S	2752	GGCCACAGCTAGAACACTTTACTTCTCTGAGTATCCTCACAGTGCCTCTG	2	+	110487150-110487199	2qE3	Mus musculus solute carrier family 5 (sodium/glucose cotransporter), member 12 (Slc5a12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AI315119; SMCT2; D630015G19	AI315119; SMCT2; D630015G19
Mus musculus	Riken	ILMN_205550	ILMN_205550	1110037J23RIK	ri|1110037J23|ZA00011C19|AK027962|1084					AK027962	1110037J23Rik		ILMN_1233498	005080086	S	699	CATGGAAGAAGAAAAGGGACATGATGCAAACTGAGGTGTGGCCCTGCCCC										
Mus musculus	RefSeq	ILMN_213300	ILMN_213300	ESD	NM_016903.2	NM_016903.2		13885	31560469	NM_016903.2	Esd	NP_058599.1	ILMN_2917223	004010563	S	1545	GAAAAGTCACTGGTCTCTGTAAATACCCACACTGCTCCCCGAAAAGATCA	14	+	73484525-73484574	14qD3	Mus musculus esterase D/formylglutathione hydrolase (Esd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: S-formylglutathione + H2O = glutathione + formate [goid 18738] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IDA]	Es10; Es-10; sid478	Es10; Es-10; sid478
Mus musculus	RefSeq	ILMN_213300	ILMN_213300	ESD	NM_016903.2	NM_016903.2		13885	31560469	NM_016903.2	Esd	NP_058599.1	ILMN_2917221	003130010	S	1196	CCCATCAGACGTTAGGCCACTAGCTCTTCTTACTGCGTACCTTTCTCTCC	14	+	73484176-73484225	14qD3	Mus musculus esterase D/formylglutathione hydrolase (Esd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: S-formylglutathione + H2O = glutathione + formate [goid 18738] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IDA]	Es10; Es-10; sid478	Es10; Es-10; sid478
Mus musculus	RefSeq	ILMN_196929	ILMN_196929	LOC381274	XM_358543.1	XM_358543.1			38049677	XM_358543.1	LOC381274		ILMN_1229750	001090092	S	113	CTGAGGCTGGACTTTCACCAATGGCCTTCAAAACCAGTACCACCTGGGTG										
Mus musculus	RefSeq	ILMN_251872	ILMN_251872	TRIOBP	NM_001039155.1	NM_001039155.1		110253	88501746	NM_001039155.1	Triobp	NP_001034244.1	ILMN_3063650	007050136	I	3599	GGAAAGTTCCAGAAGCAAGAGTTCAAGCCCTGCTGCCCACTGGCTGTACA	15	+	78799064-78799113	15qE1	Mus musculus TRIO and F-actin binding protein (Triobp), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	EST478828; AI428493; Tara; mKIAA1662	EST478828; AI428493; Tara; mKIAA1662
Mus musculus	MEEBO	ILMN_216851	ILMN_216851	A730080H06RIK	scl24117.1_431				51709770	XM_489054	A730080H06Rik		ILMN_2676099	002760201	S	1834	GGGGCCTGTAAGGGACAAAGGCAGAGGGATAGTAAGCTAGAATCGGCTTC										
Mus musculus	RefSeq	ILMN_185077	ILMN_237541	SMARCD1	NM_031842.2	NM_031842.2		83797	125347395	NM_031842.2	Smarcd1	NP_114030.2	ILMN_2704467	002230243	S	744	TTTAAGTCCTTGGTGATCGAACTGGACAAAGACCTCTATGGCCCAGACAA	15	+	99536112-99536161	15qF1	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 (Smarcd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		AA407987; D15Kz1; Baf60a	AA407987; D15Kz1; Baf60a
Mus musculus	RefSeq	ILMN_185077	ILMN_237541	SMARCD1	NM_031842.2	NM_031842.2		83797	125347395	NM_031842.2	Smarcd1	NP_114030.2	ILMN_2769786	000240504	S	1334	GCTGAAGACCCAGCGAGAGTTCATGTTGAGCTTTGCCCGAGACCCTCAGG	15	+	99541553-99541602	15qF1	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 (Smarcd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		AA407987; D15Kz1; Baf60a	AA407987; D15Kz1; Baf60a
Mus musculus	RefSeq	ILMN_212319	ILMN_250509	SIPA1L3	NM_001081028.1	NM_001081028.1		74206	124486629	NM_001081028.1	Sipa1l3	NP_001074497.1	ILMN_2625099	005080553	S	7415	CTTCAGACCATTCGAATCATTTGGGGGACCTAATCATGTACATTGACAGT	7	-	30105645-30105694	7qB1	Mus musculus signal-induced proliferation-associated 1 like 3 (Sipa1l3), mRNA.				2610511M17Rik	2610511M17Rik
Mus musculus	RefSeq	ILMN_250509	ILMN_250509	SIPA1L3	NM_001081028.1	NM_001081028.1		74206	124486629	NM_001081028.1	Sipa1l3	NP_001074497.1	ILMN_2936403	004010341	S	301	AGGATCCAGCATGGCTGGGAAGATGTCTCCACCACCCACAGCCCGTGGCC	7	-	30186127-30186168:30219768-30219775	7qB1	Mus musculus signal-induced proliferation-associated 1 like 3 (Sipa1l3), mRNA.				2610511M17Rik	2610511M17Rik
Mus musculus	RefSeq	ILMN_197295	ILMN_197295	LOC380860	XM_354767.1	XM_354767.1			38075039	XM_354767.1	LOC380860		ILMN_2527621	002190468	S	1972	CAGAATGCAGGACAGAAGAGCCAGTCAGAGGAACAGTCTGAAGCGTCCTC										
Mus musculus	RefSeq	ILMN_214902	ILMN_214902	CTNS	NM_031251.2	NM_031251.2		83429	27754156	NM_031251.2	Ctns	NP_112541.1	ILMN_2968108	002510592	S	2592	GCCTTCAGAACCAAGTCCTGGGGGCTTAGAGGACCTTGCTTACCTATGTC	11	-	72999696-72999745	11qB4	Mus musculus cystinosis, nephropathic (Ctns), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [evidence IMP]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [evidence IDA]	Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [evidence IMP]; Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [evidence IDA]	AW049661; AI195360	AW049661; AI195360
Mus musculus	RefSeq	ILMN_215743	ILMN_215743	AI597479	NM_133818.1	NM_133818.1		98404	19527037	NM_133818.1	AI597479	NP_598579.1	ILMN_2970241	005360577	S	2942	CTGGAATCCTGCAGCACCAGGGCACTGAATTGCTTCCCAAAGGCTGTCAC	1	+	43172276-43172325	1qB	Mus musculus expressed sequence AI597479 (AI597479), mRNA.					
Mus musculus	RefSeq	ILMN_257860	ILMN_257860	PDPK1	NM_001080773.1	NM_001080773.1		18607	124107597	NM_001080773.1	Pdpk1	NP_001074242.1	ILMN_3124885	005270674	A	1613	AGGTCTTGAAAGGTGAAATCCCATGGTCACAAGAACTCCGACCAGAAGCC	17	-	24216488-24216537	17qA3.3	Mus musculus 3-phosphoinositide dependent protein kinase-1 (Pdpk1), transcript variant 2, mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell [goid 6972] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of a 3-phosphoinositide [goid 4676] [evidence IDA]	Pdk1	Pdk1
Mus musculus	RefSeq	ILMN_194901	ILMN_194901	UBXN2A	NM_145441.3	NM_145441.3		217379	142375695	NM_145441.3	Ubxn2a	NP_663416.1	ILMN_2510683	006110608	S	417	ATTTTAGAAGTTACTCTGATGGTGCAAGTCAGCAGTTTCTGAACTCCATC	12	-	4898128-4898177	12qA1.1	Mus musculus UBX domain protein 2A (Ubxn2a), mRNA.				6330407P03Rik; MGC7992	6330407P03Rik; MGC7992
Mus musculus	RefSeq	ILMN_216982	ILMN_216982	FGF11	NM_010198.1	NM_010198.1		14166	6753843	NM_010198.1	Fgf11	NP_034328.1	ILMN_2677798	006840753	S	208	GGCATCGTCACCAAACTGTTCTGCCGCCAGGGTTTCTACCTCCAGGCGAA	11	-	69613214-69613263	11qB3	Mus musculus fibroblast growth factor 11 (Fgf11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Fhf3	Fhf3
Mus musculus	RefSeq	ILMN_184864	ILMN_245398	SCAPER	NM_001081341.1	NM_001081341.1		244891	124486796	NM_001081341.1	Scaper	NP_001074810.1	ILMN_1222878	003290722	S	1145	CGTTATCCAAAGACTCATTATTACATTCTTCTGACCATCCTCTTTCTGAG	9	-	55722460-55722509	9qB	Mus musculus S phase cyclin A-associated protein in the ER (Scaper), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C430017I08; D530014O03Rik	C430017I08; D530014O03Rik
Mus musculus	RefSeq	ILMN_184864	ILMN_245398	SCAPER	NM_001081341.1	NM_001081341.1		244891	124486796	NM_001081341.1	Scaper	NP_001074810.1	ILMN_1247878	003830544	S	4125	TCCTTCGCTTATCACCGCGTGTCACAACAACCATCAGAACAAGCTCATTC	9	-	55403935-55403984	9qB	Mus musculus S phase cyclin A-associated protein in the ER (Scaper), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C430017I08; D530014O03Rik	C430017I08; D530014O03Rik
Mus musculus	RefSeq	ILMN_211097	ILMN_211097	MYO9B	NM_015742.2	NM_015742.2		17925	124053458	NM_015742.2	Myo9b	NP_056557.2	ILMN_2612484	003140066	S	7030	CAGGCTCTACCCAGTCCTGGAGACAAGGAAGCCCCACAGGAGGTGTGAAA	8	+	73884540-73884589	8qB3.3	Mus musculus myosin IXb (Myo9b), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The sliding movement of actin thin filaments and myosin thick filaments past each other [goid 33275] [evidence ISO]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of an actin filament to accelerate release of ADP and phosphate [goid 30898] [evidence ISO]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence ISO]		
Mus musculus	RefSeq	ILMN_211097	ILMN_211097	MYO9B	NM_015742.2	NM_015742.2		17925	124053458	NM_015742.2	Myo9b	NP_056557.2	ILMN_2617835	004570309	S	7040	CCAGTCCTGGAGACAAGGAAGCCCCACAGGAGGTGTGAAATAAAAGTACT	8	+	73884550-73884599	8qB3.3	Mus musculus myosin IXb (Myo9b), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The sliding movement of actin thin filaments and myosin thick filaments past each other [goid 33275] [evidence ISO]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of an actin filament to accelerate release of ADP and phosphate [goid 30898] [evidence ISO]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence ISO]		
Mus musculus	RefSeq	ILMN_219652	ILMN_219652	RHOV	NM_145530.1	NM_145530.1		228543	21704043	NM_145530.1	Rhov	NP_663505.1	ILMN_2859528	005090670	S	1480	GCACTGGCCAAACTGGCTGGGCTAGCAGAGGGGCAGGAAGTGAGAGTTAA	2	-	119095058-119095107	2qE5	Mus musculus ras homolog gene family, member V (Rhov), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Arhv; A030005A06Rik; MGC29297	Arhv; A030005A06Rik; MGC29297
Mus musculus	RefSeq	ILMN_189263	ILMN_224876	NETO2	NM_001081324.1	NM_001081324.1		74513	124486762	NM_001081324.1	Neto2	NP_001074793.1	ILMN_1245531	002510139	S	5310	GATTGGTTTACTGGCTCAAAAAGCCTCCAAGCTAATGATGAGGGTGCACG	8	-	88160773-88160822	8qC3	Mus musculus neuropilin (NRP) and tolloid (TLL)-like 2 (Neto2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	BTCL2; 5530601C23Rik; AI854825	BTCL2; 5530601C23Rik; AI854825
Mus musculus	RefSeq	ILMN_189263	ILMN_224876	NETO2	NM_001081324.1	NM_001081324.1		74513	124486762	NM_001081324.1	Neto2	NP_001074793.1	ILMN_1235540	004760292	S	2459	CCCCACTGGGTCTCAATTCAGTGACAGTAATCAGGGTCCTAGAACTCACC	8	-	88163624-88163673	8qC3	Mus musculus neuropilin (NRP) and tolloid (TLL)-like 2 (Neto2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	BTCL2; 5530601C23Rik; AI854825	BTCL2; 5530601C23Rik; AI854825
Mus musculus	RefSeq	ILMN_246684	ILMN_246684	732482	NR_003107.1	NR_003107.1		732482	110835698	NR_003107.1	732482		ILMN_2785605	004560543	S	405	TTCTGAGCTTCCAAGTCTCTTTCCAGCATCCACACAAGTACCTGCTGAAC	8	+	28406921-28406970	8qA2	Mus musculus predicted gene, 732482 (732482), non-coding RNA.					
Mus musculus	RefSeq	ILMN_221966	ILMN_221966	SRD5A2L2	NM_153801.2	NM_153801.2		243078	142347128	NM_153801.2	Srd5a2l2	NP_722496.1	ILMN_2742759	002340164	S	1960	GGTTCAATTAAAGTTACTCTTGTACCTTAGATGACTTGTACCATCTGTGT	5	-	83707510-83707559	5qE1	Mus musculus steroid 5 alpha-reductase 2-like 2 (Srd5a2l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]	MGC130345; MGC130344; D330017N19Rik	MGC130345; MGC130344; D330017N19Rik
Mus musculus	Riken	ILMN_207165	ILMN_207165	LY78	ri|F830005B01|PL00004B11|AK089613|1789					AK089613	Ly78		ILMN_2585533	002810220	S	1495	GTGGGTAGATGAGGGAGCCATCAGTACGCATGTGTGCAAACAAAGGGGTG										
Mus musculus	RefSeq	ILMN_197080	ILMN_197080	LOC278105	XM_204369.2	XM_204369.2			38073911	XM_204369.2	LOC278105		ILMN_2526836	006980091	S	1023	GAAGAGACCCAAGCCAGATGAGAAGTATTACTCACCCAGCATCTGGGGCC										
Mus musculus	RefSeq	ILMN_185079	ILMN_229256	KATNB1	NM_028805.2	NM_028805.2		74187	84095200	NM_028805.2	Katnb1	NP_083081.2	ILMN_1246737	002140523	S	2233	CAACTCAAGAGCATCAGTGGCCTCGTCAAGAGCAAGTCGGGTTTGAGTGG	8	+	97622582-97622631	8qD1	Mus musculus katanin p80 (WD40-containing) subunit B 1 (Katnb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A complex possessing an activity that couples ATP hydrolysis to the severing of microtubules; usually a heterodimer comprising a catalytic subunit (often 60kDa) and a regulatory subunit (often 80 kDa) [goid 8352] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with dynein, the multisubunit protein complex that is associated with microtubules [goid 45502] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2410003J24Rik; KAT	2410003J24Rik; KAT
Mus musculus	RefSeq	ILMN_229256	ILMN_229256	KATNB1	NM_028805.2	NM_028805.2		74187	84095200	NM_028805.2	Katnb1	NP_083081.2	ILMN_2955395	000780114	S	3285	GTGGAGTCTGCATGGTCAGCCAGCAACGGGAGCAACAGGGTACACAATGC	8	+	97623634-97623683	8qD1	Mus musculus katanin p80 (WD40-containing) subunit B 1 (Katnb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A complex possessing an activity that couples ATP hydrolysis to the severing of microtubules; usually a heterodimer comprising a catalytic subunit (often 60kDa) and a regulatory subunit (often 80 kDa) [goid 8352] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with dynein, the multisubunit protein complex that is associated with microtubules [goid 45502] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2410003J24Rik; KAT	2410003J24Rik; KAT
Mus musculus	RefSeq	ILMN_212538	ILMN_212538	TBC1D19	NM_144517.3	NM_144517.3		67249	141801409	NM_144517.3	Tbc1d19	NP_653100.1	ILMN_2627557	002320544	S	1736	CAGAATTAAACTTTGCACATAAGCCAATAAAGATCATGTTCCCTCCTCCG	5	+	54294719-54294768	5qC1	Mus musculus TBC1 domain family, member 19 (Tbc1d19), mRNA.				2810453K03Rik	2810453K03Rik
Mus musculus	Riken	ILMN_205927	ILMN_205927	B230322F03RIK	ri|B230322F03|PX00159D02|AK045908|1570					AK045908	B230322F03Rik		ILMN_1227035	000870259	S	765	GCTGGCCTGTTGCCTGTATAGGAGGTTCCAAGGTGTCTGGAGCTCTCTTG										
Mus musculus	Riken	ILMN_202812	ILMN_202812	6720463L11RIK	ri|6720463L11|PX00059H16|AK032861|1928					AK032861	6720463L11Rik		ILMN_2552490	002340278	S	962	GCGTCAATCAAGCCTCATCTGGCTCTTTTGGCTGTCAGTTTGATCGTCGT										
Mus musculus	RefSeq	ILMN_221484	ILMN_252058	GSG1	NM_001080553.1	NM_001080553.1		14840	123317842	NM_001080553.1	Gsg1	NP_001074022.1	ILMN_1222441	006620044	S	1180	CCCATCCGCTCTGTCTCTGAAGCTATTGACCTCTACTCGGCGCTACAGGA	6	-	135187493-135187542	6qG1	Mus musculus germ cell-specific gene 1 (Gsg1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]				
Mus musculus	RefSeq	ILMN_221484	ILMN_252058	GSG1	NM_001080553.1	NM_001080553.1		14840	123317842	NM_001080553.1	Gsg1	NP_001074022.1	ILMN_2739922	004810594	S	611	CATGTCACCCCACTCTCCGATTTGGAGGGGAGTGGTTAATGGAGAAGGCT	6	-	135192102-135192151	6qG1	Mus musculus germ cell-specific gene 1 (Gsg1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]				
Mus musculus	MEEBO	ILMN_192317	ILMN_192317	ATP6V0A2	scl27215.23_293				6755798	NM_011596	Atp6v0a2		ILMN_1249930	004780575	S	1	GTTTCTGCCATATGTACTGTCCCTGTTGGCAGTTGTGATGGGGCCTCTTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_247720	ILMN_247720	DDX49	NM_001024922.2	NM_001024922.2		234374	67972434	NM_001024922.2	Ddx49	NP_001020093.2	ILMN_2801380	004610021	S	870	AGAGCGCTTTGCGGCCCTGGCCAAATTCAAGTCCAGCATCTATCGGATTC	8	-	72819498-72819547	8qB3.3	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 (Ddx49), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	R27090_2	R27090_2
Mus musculus	RefSeq	ILMN_221113	ILMN_247720	DDX49	NM_001024922.2	NM_001024922.2		234374	67972434	NM_001024922.2	Ddx49	NP_001020093.2	ILMN_1245733	001190543	S	1202	TCGCACTCCCTTCGCACTACGTTGACCTGCGTGAGGATTTGTAGAACCTC	8	-	72817753-72817798:72817898-72817901	8qB3.3	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 (Ddx49), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	R27090_2	R27090_2
Mus musculus	RefSeq	ILMN_249623	ILMN_249623	SLC25A34	NM_001013780.1	NM_001013780.1		384071	85719317	NM_001013780.1	Slc25a34	NP_001013802.1	ILMN_3052781	001990327	I	2375	AGTCCAGGCTTCCTGTTTGTGTACGTCCGGGGGAGCTCAGGCCTAGGAAA	4	-	141174997-141175046	4qE1	Mus musculus solute carrier family 25, member 34 (Slc25a34), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Gm1369; MGC107701	Gm1369; MGC107701
Mus musculus	RefSeq	ILMN_249623	ILMN_249623	SLC25A34	NM_001013780.1	NM_001013780.1		384071	85719317	NM_001013780.1	Slc25a34	NP_001013802.1	ILMN_3129337	005290626	A	861	GGACGTCGTCAGCACGCGGCTGTACAATCAGCCAGTGGACAGAGCTGGCA	4	-	141177294-141177343	4qE1	Mus musculus solute carrier family 25, member 34 (Slc25a34), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Gm1369; MGC107701	Gm1369; MGC107701
Mus musculus	RefSeq	ILMN_213027	ILMN_213027	2610204K14RIK	NM_025997.1	NM_025997.1		67148	21313121	NM_025997.1	2610204K14Rik	NP_080273.1	ILMN_2810443	005870133	S	1054	CCTGAGGCGGTGGAGGGTGGGATGGTAGCACTCAACATTTTGTATATCCC	7	+	81642634-81642683	7qD3	Mus musculus RIKEN cDNA 2610204K14 gene (2610204K14Rik), mRNA.				2410047I02Rik	2410047I02Rik
Mus musculus	RefSeq	ILMN_195714	ILMN_232493	LTBP1	NM_019919.2	NM_019919.2		268977	46249418	NM_019919.2	Ltbp1	NP_064303.2	ILMN_2765452	004830193	S	125	CCTCACCTTGAGCAGCTCGCGCCCCTCCCCTCCTCTCCACCCCAACTCCC	17	+	75404993-75405042	17qE2	Mus musculus latent transforming growth factor beta binding protein 1 (Ltbp1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Tgfb; 9830146M04; Ltbp-1; 9430031G15Rik	Tgfb; 9830146M04; Ltbp-1; 9430031G15Rik
Mus musculus	RefSeq	ILMN_195714	ILMN_232493	LTBP1	NM_019919.2	NM_019919.2		268977	46249418	NM_019919.2	Ltbp1	NP_064303.2	ILMN_1234779	002070025	S	1071	GCAAGCAGCAAAACATACGTCAACCAAGAAGGCAGACACCTTGCCCAGGG	17	+	75465417-75465466	17qE2	Mus musculus latent transforming growth factor beta binding protein 1 (Ltbp1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Tgfb; 9830146M04; Ltbp-1; 9430031G15Rik	Tgfb; 9830146M04; Ltbp-1; 9430031G15Rik
Mus musculus	RefSeq	ILMN_195714	ILMN_232493	LTBP1	NM_019919.2	NM_019919.2		268977	46249418	NM_019919.2	Ltbp1	NP_064303.2	ILMN_1224967	000840189	S	835	ATCAACGTCTGTGGAGGGCAGTGCTGCCACGGGTGGAGTAAACCTCCTGG	17	+	75406672-75406721	17qE2	Mus musculus latent transforming growth factor beta binding protein 1 (Ltbp1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Tgfb; 9830146M04; Ltbp-1; 9430031G15Rik	Tgfb; 9830146M04; Ltbp-1; 9430031G15Rik
Mus musculus	RefSeq	ILMN_218709	ILMN_218709	NAT1	NM_008673.1	NM_008673.1		17960	6679013	NM_008673.1	Nat1	NP_032699.1	ILMN_2879329	007160500	S	887	CCTTGCAGACCTCGGAAGGGGTTCACTGTTTAGTGGGCTCCACCTTTACA	8	+	70015543-70015592	8qB3.3	Mus musculus N-acetyltransferase 1 (arylamine N-acetyltransferase) (Nat1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [evidence IDA]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IEA]	Nat-1	Nat-1
Mus musculus	RefSeq	ILMN_188531	ILMN_240316	RFX4	NM_027689.3	NM_027689.3		71137	133892183	NM_027689.3	Rfx4	NP_081965.2	ILMN_2722156	003800369	S	24	TACATCGGCTGAAAATGAACTGGGCTGCCTTCGGAGGGCCTGAGTTCTTC	10	+	84300916-84300929:84300930-84300965	10qC1	Mus musculus regulatory factor X, 4 (influences HLA class II expression) (Rfx4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IMP]; The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input [goid 21516] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	NYD-sp10; 4933412G19Rik	NYD-sp10; 4933412G19Rik
Mus musculus	RefSeq	ILMN_185836	ILMN_250776	GPI1	XM_001004276.1	XM_001004276.1		14751	94410169	XM_001004276.1	Gpi1	XP_001004276.1	ILMN_2430422	006480707	S	1920	CCCTGTCATTCTACTTTCCACCATGTTAATTAGGCCCATTTGATGGCCAG				7qB1	PREDICTED: Mus musculus glucose phosphate isomerase 1 (Gpi1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IC ]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: D-glucose 6-phosphate = D-fructose 6-phosphate [goid 4347] [evidence IDA]; Catalysis of the reaction: D-glucose 6-phosphate = D-fructose 6-phosphate [goid 4347] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204199	ILMN_204199	YWHAZ	ri|C820005J08|PX00088E19|AK050511|3278					AK050511	Ywhaz		ILMN_1242653	002760546	S	2660	GCAGATGTGTTACAGTTTCACTAAGCTCCTTAGGATTGAGCTCTGACTGG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]		
Mus musculus	RefSeq	ILMN_241589	ILMN_241589	AW146299	NM_001013774.1	NM_001013774.1		381686	62000645	NM_001013774.1	AW146299	NP_001013796.1	ILMN_3048509	007570215	I	2109	CGTGGCAAACATTTTTTATCAGCCGAGGGATCAACGAGGGACCATGTCTT	5	-	145237360-145237409	5qG2	Mus musculus expressed sequence AW146299 (AW146299), mRNA.				Gm1055	Gm1055
Mus musculus	RefSeq	ILMN_241589	ILMN_241589	AW146299	NM_001013774.1	NM_001013774.1		381686	62000645	NM_001013774.1	AW146299	NP_001013796.1	ILMN_3124387	006620343	A	916	AAAGATCCATATCCCAGTGAGAGCGCCGTGCGGCAGATGCTACCTCCCCT	5	-	145250676-145250725	5qG2	Mus musculus expressed sequence AW146299 (AW146299), mRNA.				Gm1055	Gm1055
Mus musculus	RefSeq	ILMN_213407	ILMN_248320	C1QTNF5	NM_145613.3	NM_145613.3		235312	95147547	NM_145613.3	C1qtnf5	NP_663588.2	ILMN_2636764	005550577	S	3925	GTGAATGACTTAGGAAGAGAGGGAGCCACTTCCAGTCCCACTGCTGGCAA					Mus musculus C1q and tumor necrosis factor related protein 5 (C1qtnf5), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			CTRP5	CTRP5
Mus musculus	RefSeq	ILMN_222647	ILMN_248320	C1QTNF5	NM_145613.3	NM_145613.3		235312	95147547	NM_145613.3	C1qtnf5	NP_663588.2	ILMN_2752799	000780561	S	3243	TGACGGCCGTGATGGCCGCGACGGTGCACCCGGAGCTCCGGGAGAGAAAG					Mus musculus C1q and tumor necrosis factor related protein 5 (C1qtnf5), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			CTRP5	CTRP5
Mus musculus	RefSeq	ILMN_221829	ILMN_221829	PRSS8	NM_133351.1	NM_133351.1		76560	19111159	NM_133351.1	Prss8	NP_579929.1	ILMN_2740965	002650601	S	1304	CCGGGAGGGCAGCATGCCGACTTGATCTTTGAGCCCACTCGTCTGCATTT	7	-	135069718-135069767	7qF3	Mus musculus protease, serine, 8 (prostasin) (Prss8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	2410039E18Rik; C79772; AI313909; mCAP1; CAP1	2410039E18Rik; C79772; AI313909; mCAP1; CAP1
Mus musculus	RefSeq	ILMN_221829	ILMN_221829	PRSS8	NM_133351.1	NM_133351.1		76560	19111159	NM_133351.1	Prss8	NP_579929.1	ILMN_2846148	006350291	S	1667	GGAGCTGGCTGGGGCTTGGGTCAGGGTGAGGAATAAAAGGAGCGAGGAAT	7	-	135069355-135069404	7qF3	Mus musculus protease, serine, 8 (prostasin) (Prss8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	2410039E18Rik; C79772; AI313909; mCAP1; CAP1	2410039E18Rik; C79772; AI313909; mCAP1; CAP1
Mus musculus	RefSeq	ILMN_209282	ILMN_209282	SH3GL2	NM_019535.2	NM_019535.2		20404	31560791	NM_019535.2	Sh3gl2	NP_062408.2	ILMN_1251416	001400689	S	2685	CTGCTTCCGATATGCCACTTGCGGTAGTGGATCGTGTGGAGTGAAAGGCA	4	+	85035162-85035211	4qC4	Mus musculus SH3-domain GRB2-like 2 (Sh3gl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SH3PA; AI120490; Sh3d2a; 9530001L19Rik; AW555077; EEN-B1; B930049H17Rik	SH3PA; AI120490; Sh3d2a; 9530001L19Rik; AW555077; EEN-B1; B930049H17Rik
Mus musculus	RefSeq	ILMN_209282	ILMN_209282	SH3GL2	NM_019535.2	NM_019535.2		20404	31560791	NM_019535.2	Sh3gl2	NP_062408.2	ILMN_2701695	003870390	S	891	CCAAACCACGGATGAGCCTAGAGTTTGCCACTGGAGACAGTACTCAGCCC	4	+	85031735-85031784	4qC4	Mus musculus SH3-domain GRB2-like 2 (Sh3gl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SH3PA; AI120490; Sh3d2a; 9530001L19Rik; AW555077; EEN-B1; B930049H17Rik	SH3PA; AI120490; Sh3d2a; 9530001L19Rik; AW555077; EEN-B1; B930049H17Rik
Mus musculus	RefSeq	ILMN_209282	ILMN_209282	SH3GL2	NM_019535.2	NM_019535.2		20404	31560791	NM_019535.2	Sh3gl2	NP_062408.2	ILMN_2701701	003840136	S	892	AAACCACGGATGAGCCTAGAGTTTGCCACTGGAGACAGTACTCAGCCCAA	4	+	85031736-85031785	4qC4	Mus musculus SH3-domain GRB2-like 2 (Sh3gl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SH3PA; AI120490; Sh3d2a; 9530001L19Rik; AW555077; EEN-B1; B930049H17Rik	SH3PA; AI120490; Sh3d2a; 9530001L19Rik; AW555077; EEN-B1; B930049H17Rik
Mus musculus	RefSeq	ILMN_233918	ILMN_233918	CDH5	NM_009868.3	NM_009868.3		12562	40254596	NM_009868.3	Cdh5	NP_033998.2	ILMN_2866951	001230129	S	3358	CACATCTCAGGGAATGAACCTCACCCCCAGGGCACACCTTGCAGAATGCA	8	+	106667848-106667897	8qD3	Mus musculus cadherin 5 (Cdh5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IC ]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state [goid 1955] [evidence IMP]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	VEC; CD144; VE-Cad; 7B4; AA408225	VEC; CD144; VE-Cad; 7B4; AA408225
Mus musculus	RefSeq	ILMN_222438	ILMN_237968	SCFD1	NM_029825.2	NM_029825.2		76983	141802288	NM_029825.2	Scfd1	NP_084101.1	ILMN_1257281	005670500	S	1996	GCCATGCCCTAACTGCAATCTGTCAGAATCAGTCATTTTTAAAGAAATTC	12	+	52550988-52551037	12qC1	Mus musculus Sec1 family domain containing 1 (Scfd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]		3110021P21Rik; RA410; STXBP1L2	3110021P21Rik; RA410; STXBP1L2
Mus musculus	Riken	ILMN_201791	ILMN_201791	ABCB10	ri|2610027L15|ZX00055L09|AK011569|663					AK011569	Abcb10		ILMN_1218457	002510273	S	532	GACACCTGTTGGAAAGCTATGGATGCTGGCTGGCACTCCCCATCTGAGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence ISA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]		
Mus musculus	RefSeq	ILMN_252274	ILMN_252274	RNASE11	NM_001011877.1	NM_001011877.1		497113	59858546	NM_001011877.1	Rnase11	NP_001011877.1	ILMN_2877153	003450221	S	462	TGCAGGCCACCAGTGCCTCAGGTCCCATGAGCACAGCATCACCTCATTAA	14	-	51669259-51669308	14qC1	Mus musculus ribonuclease, RNase A family, 11 (non-active) (Rnase11), mRNA.					
Mus musculus	RefSeq	ILMN_199688	ILMN_252274	RNASE11	NM_001011877.1	NM_001011877.1		497113	59858546	NM_001011877.1	Rnase11	NP_001011877.1	ILMN_1253337	001010746	S	269	GTGTAAACAGCCTAAGAGTCTGGAGAACCGAGGTAGACGGGAATGCATCC	14	-	51669452-51669501	14qC1	Mus musculus ribonuclease, RNase A family, 11 (non-active) (Rnase11), mRNA.					
Mus musculus	RefSeq	ILMN_221931	ILMN_221931	ERDR1	NM_133362.1	NM_133362.1		170942	19111169	NM_133362.1	Erdr1	NP_579940.1	ILMN_2998658	007610017	S	581	CACCCACGAAAGCACACACGTAGAAGCGGACGCCGTGGTCAAGATGTCTC					Mus musculus erythroid differentiation regulator 1 (Erdr1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	edr; MGC5764	edr; MGC5764
Mus musculus	RefSeq	ILMN_209681	ILMN_209681	CORO2A	NM_178893.3	NM_178893.3		107684	141802181	NM_178893.3	Coro2a	NP_849224.1	ILMN_2768936	004560138	S	3265	GCCTCTTATGTGTGGCTAGGGGTGGGGTCCAGTGAGCTTCCCATCAAATC	4	-	46550606-46550655	4qB1	Mus musculus coronin, actin binding protein 2A (Coro2a), mRNA.			Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISA]	AI563590; IR10	AI563590; IR10
Mus musculus	RefSeq	ILMN_209681	ILMN_209681	CORO2A	NM_178893.3	NM_178893.3		107684	141802181	NM_178893.3	Coro2a	NP_849224.1	ILMN_2598190	006770707	S	1421	AGAATCCTACCAAGAGGACATCTACCCGCCCACCGCAGCGGCCCAGCCCT	4	-	46554803-46554852	4qB1	Mus musculus coronin, actin binding protein 2A (Coro2a), mRNA.			Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISA]	AI563590; IR10	AI563590; IR10
Mus musculus	RefSeq	ILMN_210701	ILMN_326562	LOC677643	XR_031047.1	XR_031047.1		677643	149275108	XR_031047.1	LOC677643		ILMN_1225733	000050064	S	71	CCTCTTTTTGGTAGCAACAGCTACAGGTGTCCACTCCCAGGTCCAACTGC					PREDICTED: Mus musculus similar to monoclonal antibody BBK-2 heavy chain (LOC677643), misc RNA.					
Mus musculus	RefSeq	ILMN_214828	ILMN_247828	NCALD	NM_134094.3	NM_134094.3		52589	142372717	NM_134094.3	Ncald	NP_598855.2	ILMN_2652414	005860609	S	3412	TTGAAGGATGTTTCAGAATGCTGGACTGTTCATACCTCGCTTAGGATGGA	15	-	37296175-37296224	15qB3.1	Mus musculus neurocalcin delta (Ncald), mRNA. XM_921409 XM_921419 XM_921424			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	D030020D09Rik; D15Ertd412e; AI848120	D030020D09Rik; D15Ertd412e; AI848120
Mus musculus	RefSeq	ILMN_211722	ILMN_211722	GPR108	NM_030084.3	NM_030084.3		78308	118130680	NM_030084.3	Gpr108	NP_084360.2	ILMN_2618882	006400097	S	1989	GTCATCCCATTGCTCTGGAGAGCCCGGGCTTCATAAAACCTTGATTAGTA	17	-	57374393-57374442	17qD	Mus musculus G protein-coupled receptor 108 (Gpr108), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C79132; AA589464; 1810015L19Rik	C79132; AA589464; 1810015L19Rik
Mus musculus	RefSeq	ILMN_211722	ILMN_211722	GPR108	NM_030084.3	NM_030084.3		78308	118130680	NM_030084.3	Gpr108	NP_084360.2	ILMN_1228572	003870593	S	954	AAGATCCACTGGCTCATGGCAGCCCTGGCGTTCACCAAGAGTGTCTCCCT	17	-	57377286-57377335	17qD	Mus musculus G protein-coupled receptor 108 (Gpr108), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C79132; AA589464; 1810015L19Rik	C79132; AA589464; 1810015L19Rik
Mus musculus	RefSeq	ILMN_211722	ILMN_211722	GPR108	NM_030084.3	NM_030084.3		78308	118130680	NM_030084.3	Gpr108	NP_084360.2	ILMN_2746811	001820674	S	965	GCTCATGGCAGCCCTGGCGTTCACCAAGAGTGTCTCCCTACTCTTCCACA	17	-	57377275-57377324	17qD	Mus musculus G protein-coupled receptor 108 (Gpr108), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C79132; AA589464; 1810015L19Rik	C79132; AA589464; 1810015L19Rik
Mus musculus	Riken	ILMN_203215	ILMN_203215	6620401C13RIK	ri|B230207N07|PX00069O02|AK045506|2429					AK045506	6620401C13Rik		ILMN_2555594	001940682	S	2016	CTTGTGTTTGTGAGCATGGGCTAGATGAGAGTATGTCTGAGGTTGCCTGC										
Mus musculus	RefSeq	ILMN_222113	ILMN_235755	4632401L01	XM_980292.1	XM_980292.1		329917	94372190	XM_980292.1	4632401L01	XP_985386.1	ILMN_2744782	000840523	S	1987	TACATTAAGTTTAACCTTTTTTATAGTTATGAAAAACATCTGTCTACGTA	4	+	111425003-111425052		PREDICTED: Mus musculus hypothetical protein 4632401L01 (4632401L01), mRNA.					
Mus musculus	RefSeq	ILMN_216253	ILMN_216253	ALOX15	NM_009660.2	NM_009660.2		11687	31982816	NM_009660.2	Alox15	NP_033790.2	ILMN_2789023	006580601	S	2008	CCCCCTCTCGATTGGTTATTTAATCAAGACCACTCAAGTGCATCCCTGTG	11	-	70160682-70160731	11qB3	Mus musculus arachidonate 15-lipoxygenase (Alox15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,14Z)-(12S)-12-hydroperoxyicosa-5,8,10,14-tetraenoate [goid 4052] [evidence IEA]	Alox12l; 12-LO; L-12LO	Alox12l; 12-LO; L-12LO
Mus musculus	RefSeq	ILMN_206754	ILMN_312639	4933412A08RIK	XM_001480761.1	XM_001480761.1		74445	149270583	XM_001480761.1	4933412A08Rik	XP_001480811.1	ILMN_1253627	005560215	S	5017	CTACGAGGCAAGCTCTAGGCCAGTGACCACAAAAGACAGGTGGGCAACCC	19	+	60303430-60303479	19qD3	PREDICTED: Mus musculus RIKEN cDNA 4933412A08 gene (4933412A08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214627	ILMN_214627	WDR24	NM_173741.2	NM_173741.2		268933	31343449	NM_173741.2	Wdr24	NP_776102.1	ILMN_1213899	003420450	S	2617	AGCTGCCTCAACCAAGCCTCCACCACGCTGCATGTCAACTGTAGTCACTG	17	+	25965206-25965255	17qA3.3	Mus musculus WD repeat domain 24 (Wdr24), mRNA.				MGC47001; BC037651	MGC47001; BC037651
Mus musculus	RefSeq	ILMN_215820	ILMN_215820	1110020A21RIK	XM_148821.4	XM_148821.4		68531	94402190	XM_148821.4	1110020A21Rik	XP_148821.1	ILMN_2663960	007380692	S	497	GAAGAGCTCAGAAAGGCAACACCATTCTTGGGCTGAGGTCCTCGATGTGC	17	-	85348359-85348365:85348366-85348394:85356540-85356553	17qE4	PREDICTED: Mus musculus RIKEN cDNA 1110020A21 gene (1110020A21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210552	ILMN_248036	OLFR59	NM_011002.1	NM_011002.1		18359	53828658	NM_011002.1	Olfr59	NP_035132.1	ILMN_2606754	005810097	S	637	CTCATCCTTATGTCTTATATCCGCATTGTTTCAGCCATCCTCAGGGTCCC	11	+	74102786-74102835	11qB5	Mus musculus olfactory receptor 59 (Olfr59), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	IH3; MOR133-3P	IH3; MOR133-3P
Mus musculus	RefSeq	ILMN_187599	ILMN_187599	TRIM2	NM_030706.1	NM_030706.1		80890	14010848	NM_030706.1	Trim2	NP_109631.1	ILMN_2445505	000610095	S	7088	GGGAGAAACAAGACTCGAGTGTATATCGTTACCATGCACAAAAGTCTCAG	3	-	83964397-83964446	3qF1	Mus musculus tripartite motif protein 2 (Trim2), mRNA. XM_984114 XM_984144 XM_984172 XM_984200 XM_984238 XM_984275 XM_984313	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]	narf; KIAA0517; mKIAA0517	narf; KIAA0517; mKIAA0517
Mus musculus	RefSeq	ILMN_187599	ILMN_187599	TRIM2	NM_030706.1	NM_030706.1		80890	14010848	NM_030706.1	Trim2	NP_109631.1	ILMN_2511355	003460064	S	3646	GCTGAGTCCTTGGTGTGCGGGAATAGGCAGCACTCTGAAAGACAGAAGCA	3	-	83967839-83967888	3qF1	Mus musculus tripartite motif protein 2 (Trim2), mRNA. XM_984114 XM_984144 XM_984172 XM_984200 XM_984238 XM_984275 XM_984313	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]	narf; KIAA0517; mKIAA0517	narf; KIAA0517; mKIAA0517
Mus musculus	MEEBO	ILMN_212418	ILMN_212418	MGMT	scl0017314.1_97	NM_008598.1			6678877	NM_008598.1	Mgmt		ILMN_2750079	006940253	S	878	TGAGCGAGGAAGGCCTGATGAGCCTTAGGGCCCCTTTGTATGAAGGGAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The repair of alkylation damage, e.g. the removal of the alkyl group at the O6-position of guanine by O6-alkylguanine-DNA alkyltransferase (AGT) [goid 6307] [evidence IDA]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: DNA (containing 6-O-methylguanine) + (protein)-L-cysteine = DNA (without 6-O-methylguanine) + protein S-methyl-L-cysteine [goid 3908] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IDA]		
Mus musculus	MEEBO	ILMN_212418	ILMN_212418	MGMT	scl0017314.1_97	NM_008598.1			6678877	NM_008598.1	Mgmt		ILMN_1232183	003990435	S	660	TGAATGACACATAGACGTAACGCGTGTCGGAAGCGGATGTGTGGTGGCAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The repair of alkylation damage, e.g. the removal of the alkyl group at the O6-position of guanine by O6-alkylguanine-DNA alkyltransferase (AGT) [goid 6307] [evidence IDA]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: DNA (containing 6-O-methylguanine) + (protein)-L-cysteine = DNA (without 6-O-methylguanine) + protein S-methyl-L-cysteine [goid 3908] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IDA]		
Mus musculus	RefSeq	ILMN_191796	ILMN_229716	SNAP25	NM_011428.3	NM_011428.3		20614	134032017	NM_011428.3	Snap25	NP_035558.1	ILMN_1231105	005220239	S	405	GGACCAAATCAATAAGGACATGAAAGAAGCAGAAAAGAATTTGACGGACC	2	+	136595821-136595870	2qF3	Mus musculus synaptosomal-associated protein 25 (Snap25), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 1a (or orthologs thereof) [goid 70044] [evidence ISO]; A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, and complexin I (or orthologs thereof) [goid 70032] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]	Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence IDA]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence ISO]	sp; Bdr; SNAP-25	sp; Bdr; SNAP-25
Mus musculus	RefSeq	ILMN_244301	ILMN_244301	SERPINA1C	NM_009245.2	NM_009245.2		20702	76881808	NM_009245.2	Serpina1c	NP_033271.1	ILMN_3004600	006250121	S	968	CCAAGTTCCTGCTAAAGAGGCCCAGAAGGTTAGCCCAGATCCACTTCCCC	12|NT_114988.1	+	25615-25642:26522-26543	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 1c (Serpina1c), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Spi1-3; PI3	Spi1-3; PI3
Mus musculus	MEEBO	ILMN_195773	ILMN_195773	GI_40210_EMB_X04603.1_BSTHRBC_2239	gi_40210_emb_X04603.1_BSTHRBC_2239						gi_40210_emb_X04603.1_BSTHRBC_2239		ILMN_1257744	003120474	S	1	GCGTTCCTCAGCGTCAGCGGAGGGCGCCTTTTTTTGCTGGAGATAAAGGA										
Mus musculus	RefSeq	ILMN_212444	ILMN_212444	OTTMUSG00000010433	NM_177571.3	NM_177571.3		194225	124248521	NM_177571.3	OTTMUSG00000010433	NP_808239.2	ILMN_2626526	004560370	S	1718	CTTCTTCTCTAGCATTATTGTAGTTTGAGTGTGTTACAATAGAGGCACAC	4	+	143443425-143443474	4qE1	Mus musculus predicted gene, OTTMUSG00000010433 (OTTMUSG00000010433), mRNA.				E330017N17	E330017N17
Mus musculus	RefSeq	ILMN_187268	ILMN_260170	4931406H21RIK	NM_175264.3	NM_175264.3		77592	142350685	NM_175264.3	4931406H21Rik	NP_780473.1	ILMN_2612311	003780131	S	3791	CCCCCTCTGATGTTCCCTGGTACCTCAAGGAGGTATAGCTTAATAAAGCC	14	+	26410080-26410129	14qA3	Mus musculus RIKEN cDNA 4931406H21 gene (4931406H21Rik), mRNA.					
Mus musculus	Riken	ILMN_201814	ILMN_201814	2210012C09RIK	ri|2210012C09|ZX00053L23|AK008713|1533					AK008713	2210012C09Rik		ILMN_1244534	006450156	S	1201	GGAAGCCAATGCTGTGCCAATTCACAGGAAGGAGAAAAAGCGATGCAAAC										
Mus musculus	RefSeq	ILMN_222963	ILMN_222963	CRELD2	NM_029720.2	NM_029720.2		76737	142372255	NM_029720.2	Creld2	NP_083996.1	ILMN_2757368	000290685	S	852	GGGCTGTACAGGAAAAGGCCCAGCCAACTGTAAGGAGTGTATTGCCGGCT	15	+	88655097-88655146	15qE3	Mus musculus cysteine-rich with EGF-like domains 2 (Creld2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	C85758; 5730592L21Rik	C85758; 5730592L21Rik
Mus musculus	MEEBO	ILMN_195870	ILMN_195870	TOR2A	scl030933.5_3	NM_152800.1			22779882	NM_152800.1	Tor2a		ILMN_2519488	006290554	S	17	AGATGAAGAAAGGTGTTGGCCAGGCCAAGGAAGAAAGGTCTAGAAGCATC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_215819	ILMN_215819	CSF2RB	NM_007780.3	NM_007780.3		12983	142375090	NM_007780.3	Csf2rb	NP_031806.2	ILMN_1253312	004590133	S	1344	TGAGCACACATTCCAGGTCCAGTACAAGAAGAAATCGGACAGCTGGGAGG	15	+	78175006-78175054:78175829-78175829	15qE1	Mus musculus colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) (Csf2rb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence IEA];  [goid 4896] [evidence IEA]	Il5rb; Il3rb; CDw131; Csf2rb1; AI848964; Bc; Csfgmrb; AIC2B; MGC130522; Il3r; Il3rb1	Il5rb; Il3rb; CDw131; Csf2rb1; AI848964; Bc; Csfgmrb; AIC2B; MGC130522; Il3r; Il3rb1
Mus musculus	RefSeq	ILMN_215819	ILMN_215819	CSF2RB	NM_007780.3	NM_007780.3		12983	142375090	NM_007780.3	Csf2rb	NP_031806.2	ILMN_1236070	000460072	S	1319	CTCAGAAGATGGCTTACTCATTCATTGAGCACACATTCCAGGTCCAGTAC	15	+	78174981-78175030	15qE1	Mus musculus colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) (Csf2rb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence IEA];  [goid 4896] [evidence IEA]	Il5rb; Il3rb; CDw131; Csf2rb1; AI848964; Bc; Csfgmrb; AIC2B; MGC130522; Il3r; Il3rb1	Il5rb; Il3rb; CDw131; Csf2rb1; AI848964; Bc; Csfgmrb; AIC2B; MGC130522; Il3r; Il3rb1
Mus musculus	RefSeq	ILMN_215819	ILMN_215819	CSF2RB	NM_007780.3	NM_007780.3		12983	142375090	NM_007780.3	Csf2rb	NP_031806.2	ILMN_2688262	006760484	S	2806	CCCTATCAGCCCATGCCCCAGGCGCCAGCCATTCAGTTTTTCAAGTCCCT	15	+	78179502-78179551	15qE1	Mus musculus colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) (Csf2rb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence IEA];  [goid 4896] [evidence IEA]	Il5rb; Il3rb; CDw131; Csf2rb1; AI848964; Bc; Csfgmrb; AIC2B; MGC130522; Il3r; Il3rb1	Il5rb; Il3rb; CDw131; Csf2rb1; AI848964; Bc; Csfgmrb; AIC2B; MGC130522; Il3r; Il3rb1
Mus musculus	RefSeq	ILMN_198054	ILMN_198054	LOC277231	XM_203691.3	XM_203691.3			38081081	XM_203691.3	LOC277231		ILMN_2530330	006400368	S	730	CGAAAAATCCAGACTGACCAAGGGAATACTGATGTCCCTCGCCTTGGGTG										
Mus musculus	RefSeq	ILMN_218800	ILMN_218800	FNDC7	NM_177091.2	NM_177091.2		320181	31342783	NM_177091.2	Fndc7	NP_796065.1	ILMN_2825144	007150133	S	3235	CAGCCTTTCAGGGTTCATGGATCTCGCAGTCTGTTCTCTATGCTCTGCGC	3	-	108983433-108983482	3qF3	Mus musculus fibronectin type III domain containing 7 (Fndc7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			E230011A21Rik	E230011A21Rik
Mus musculus	RefSeq	ILMN_218800	ILMN_218800	FNDC7	NM_177091.2	NM_177091.2		320181	31342783	NM_177091.2	Fndc7	NP_796065.1	ILMN_2825147	006330152	S	2905	GTCAAGCCATCCTCCAGAGGACAGCATTCGCCCCCAAGACAGGCCTTTGT	3	-	108983763-108983812	3qF3	Mus musculus fibronectin type III domain containing 7 (Fndc7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			E230011A21Rik	E230011A21Rik
Mus musculus	RefSeq	ILMN_217947	ILMN_217947	E430025E21RIK	NM_153548.2	NM_153548.2		223593	46048299	NM_153548.2	E430025E21Rik	NP_705776.2	ILMN_1225363	003420121	S	3830	CTAAGGAAAGTGGCTCTCAACTGTCTAAATCATGGCATCGTAAGGAATTT	15	-	59163690-59163739	15qD1	Mus musculus RIKEN cDNA E430025E21 gene (E430025E21Rik), mRNA.				MGC31278; mKIAA0196; C76463; AL022848	MGC31278; mKIAA0196; C76463; AL022848
Mus musculus	RefSeq	ILMN_216098	ILMN_216098	TBXAS1	NM_011539.3	NM_011539.3		21391	79750132	NM_011539.3	Tbxas1	NP_035669.3	ILMN_1251390	005690164	S	1884	GGAATATATATCTTAGGGTGATCAAAAGGGCACATGGCATGTGAGCCTAC	6	+	39034484-39034533	6qB1	Mus musculus thromboxane A synthase 1, platelet (Tbxas1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-9-alpha,11-alpha-epoxy-15-hydroxythromba-5,13-dienoate [goid 4796] [evidence IMP]	TS; CYP5A1; TXS; TXAS; CYP5; THAS	TS; CYP5A1; TXS; TXAS; CYP5; THAS
Mus musculus	RefSeq	ILMN_216098	ILMN_216098	TBXAS1	NM_011539.3	NM_011539.3		21391	79750132	NM_011539.3	Tbxas1	NP_035669.3	ILMN_2769191	000020524	S	1447	CAGGTACAGTGCTGGAGATAGCTGTGGGTGCCCTACACCATGACCCAGAG	6	+	39030991-39031040	6qB1	Mus musculus thromboxane A synthase 1, platelet (Tbxas1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-9-alpha,11-alpha-epoxy-15-hydroxythromba-5,13-dienoate [goid 4796] [evidence IMP]	TS; CYP5A1; TXS; TXAS; CYP5; THAS	TS; CYP5A1; TXS; TXAS; CYP5; THAS
Mus musculus	MEEBO	ILMN_188996	ILMN_188996	9629812_772_RC	9629812_772_rc						9629812_772_rc		ILMN_2457454	005390600	S	1	AAACCTACACACAACTGCATTCGCTGGATACTTATCCACATTGCAGTTCC										
Mus musculus	RefSeq	ILMN_221026	ILMN_245843	PIGU	NM_001004721.1	NM_001004721.1		228812	52630435	NM_001004721.1	Pigu	NP_001004721.1	ILMN_2730074	005260132	S	895	TTGTCTGCGTGTTTCAGATCAACGTCTTCTTCTACACAGTTCCATTAGCC	2	-	155124792-155124841	2qH1	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class U (Pigu), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]		BC028278; Cdc91l1; 5430426F17Rik; Pigu	BC028278; Cdc91l1; 5430426F17Rik; Pigu
Mus musculus	RefSeq	ILMN_201002	ILMN_201002	LOC385534	XM_358273.1	XM_358273.1			38087867	XM_358273.1	LOC385534		ILMN_2540756	001710095	S	495	GGCTGAGGCGAAATCAGGTGATGACAGTGACATCTTAATAGGTACCTGGG										
Mus musculus	RefSeq	ILMN_194606	ILMN_261806	KLC1	NM_008450.2	NM_008450.2		16593	131412197	NM_008450.2	Klc1	NP_032476.2	ILMN_2605756	006130468	S	2105	GAAGACAGGCCTTAGTGTCACGCAGGTTTATTACAGTGGCATGATGGTGA	12	+	113032834-113032883	12qF1	Mus musculus kinesin light chain 1 (Klc1), transcript variant a, mRNA. XM_923750 XM_923752 XM_923756 XM_923759 XM_923763 XM_923766	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43227] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IPI]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Kns2; AI874768	Kns2; AI874768
Mus musculus	RefSeq	ILMN_194606	ILMN_261806	KLC1	NM_008450.2	NM_008450.2		16593	131412197	NM_008450.2	Klc1	NP_032476.2	ILMN_2671411	000540139	S	2084	GAGAGAGTAGCTGTTCACCTTGAAGACAGGCCTTAGTGTCACGCAGGTTT	12	+	113032813-113032862	12qF1	Mus musculus kinesin light chain 1 (Klc1), transcript variant a, mRNA. XM_923750 XM_923752 XM_923756 XM_923759 XM_923763 XM_923766	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43227] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IPI]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Kns2; AI874768	Kns2; AI874768
Mus musculus	RefSeq	ILMN_221043	ILMN_221043	PRL8A1	NM_028477.2	NM_028477.2		73244	142343582	NM_028477.2	Prl8a1	NP_082753.1	ILMN_1217895	004570639	S	727	CTACACTAAATTTCATCTCAGAACATTGAAATGTCGCATAACTGGGAAAG	13	-	27665878-27665927	13qA3.1	Mus musculus prolactin family 8, subfamily a, member 1 (Prl8a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Prlpc4; 3830403L08Rik; 1600017L04Rik; MGC129484; MGC129485; Plpcd; PLP-Cd	Prlpc4; 3830403L08Rik; 1600017L04Rik; MGC129484; MGC129485; Plpcd; PLP-Cd
Mus musculus	RefSeq	ILMN_201597	ILMN_201597	PIK3R4	XM_135116.4	XM_135116.4			38090052	XM_135116.4	Pik3r4		ILMN_2543088	001110132	S	3244	CGGAAGTGTGAGCCCAGTGGTGTAATGGGGCAGAAGCAAACATTAGTCCG							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_204884	ILMN_204884	IL7R	ri|A530022C19|PX00140F09|AK040740|1255					AK040740	Il7r		ILMN_1255750	000270102	S	1065	CTGCTCTGCGTTTTCTGGAGGTTAAGTGAACTCCCTCATGGTCTGCTGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IGI]; Any process that stops, prevents, or reduces the rate of T cell mediated cytotoxicity [goid 1915] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation in the thymus [goid 33089] [evidence IMP]; Any process that modulates the size of a cell [goid 8361] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IGI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IGI]; The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 2377] [evidence IGI]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]		
Mus musculus	RefSeq	ILMN_207353	ILMN_234199	VPS13D	XM_001002241.1	XM_001002241.1		230895	94372895	XM_001002241.1	Vps13d	XP_001002241.1	ILMN_1224839	001410440	S	15813	CTTCAGGTTTTTCTCCTTGGGTGCTTGTCTCCTAGAGGCAGGGGAGGAGG				4qE1	PREDICTED: Mus musculus vacuolar protein sorting 13D (yeast), transcript variant 2 (Vps13d), mRNA.					
Mus musculus	RefSeq	ILMN_221933	ILMN_221933	DEFB19	NM_145157.2	NM_145157.2		246700	42476290	NM_145157.2	Defb19	NP_660139.1	ILMN_2742279	002030088	S	298	ACTGGCCAAGAATACCGTGACAGCCTGCACACCGTGTACAGACTTCCAGG	2	-	152401868-152401898:152401899-152401917	2qH1	Mus musculus defensin beta 19 (Defb19), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Defb24; Defb119; Tdl	Defb24; Defb119; Tdl
Mus musculus	RefSeq	ILMN_209069	ILMN_209069	PPP1R1C	NM_172420.3	NM_172420.3		75276	142352812	NM_172420.3	Ppp1r1c	NP_766008.2	ILMN_1253830	003610288	S	1546	TATTCCTCAGTCTTATTGCAGTTTAATATATCCTGACTGTTTTATTCTTC	2	+	79649372-79649421	2qC3	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 1C (Ppp1r1c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	4930565M23Rik; 4930579P15Rik	4930565M23Rik; 4930579P15Rik
Mus musculus	RefSeq	ILMN_209069	ILMN_209069	PPP1R1C	NM_172420.3	NM_172420.3		75276	142352812	NM_172420.3	Ppp1r1c	NP_766008.2	ILMN_2634674	001190040	S	2499	GAGAAGCATCCCAAGACTGGATGTTATTGCCCAGTGTCTATCCTGTCCTC	2	+	79650325-79650374	2qC3	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 1C (Ppp1r1c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	4930565M23Rik; 4930579P15Rik	4930565M23Rik; 4930579P15Rik
Mus musculus	RefSeq	ILMN_186283	ILMN_234746	ADAM11	NM_009613.1	NM_009613.1		11488	6752959	NM_009613.1	Adam11	NP_033743.1	ILMN_1255996	004290079	S	3094	GCCCACTGCCTAGCTCATGACTCTGTCCCAGACTGTCTTCGATTCCAAAC	11	+	102640217-102640266	11qE1	Mus musculus a disintegrin and metallopeptidase domain 11 (Adam11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW060611; Mdc	AW060611; Mdc
Mus musculus	RefSeq	ILMN_186283	ILMN_234746	ADAM11	NM_009613.1	NM_009613.1		11488	6752959	NM_009613.1	Adam11	NP_033743.1	ILMN_2629383	007380139	S	282	GGTGAGTTTCGTCATCCCGGCCTTCGACTCAAACTTCACTCTGGACCTGG	11	+	102631225-102631274	11qE1	Mus musculus a disintegrin and metallopeptidase domain 11 (Adam11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW060611; Mdc	AW060611; Mdc
Mus musculus	RefSeq	ILMN_234746	ILMN_234746	ADAM11	NM_009613.1	NM_009613.1		11488	6752959	NM_009613.1	Adam11	NP_033743.1	ILMN_2812954	006520754	S	2714	GAGTAGCTCCCCTGGACCTCACGGGAAGGGGCTGATCTACATTTTCTCTC	11	+	102639837-102639886	11qE1	Mus musculus a disintegrin and metallopeptidase domain 11 (Adam11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW060611; Mdc	AW060611; Mdc
Mus musculus	MEEBO	ILMN_189756	ILMN_189756	4930563E18RIK	scl15296.3.1_67				51770778	XM_488840	4930563E18Rik		ILMN_2464089	005890152	S	12	TGTACATGCTATTATGAGAAATAACAAGTGTCTTTAAATTAATATGTTTT										
Mus musculus	MEEBO	ILMN_215509	ILMN_215509	OSBPL1A	scl00403203.2_260	NM_207530.1			46430519	NM_207530.1	Osbpl1a		ILMN_1215970	001710382	S	754	TTACACTGTGCCGCCTACCGGGCCCACAAGCAGTGTGTCCTAAAGCTCCT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_203777	ILMN_203777	GJA5	ri|A230062H11|PX00128H14|AK038780|3671					AK038780	Gja5		ILMN_2559898	005090259	S	3487	GCCAAGAAAGGAAGAAATAACTACTGGAGTGCCTGACTTGTCGCAAACGC						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]			
Mus musculus	RefSeq	ILMN_211323	ILMN_211323	GPNMB	NM_053110.2	NM_053110.2		93695	31542906	NM_053110.2	Gpnmb	NP_444340.2	ILMN_2918882	001410735	S	3513	TTCCAAGTGACCCTGGTAAGGGAACTGTCTGCAGAATGGAAGAAATAGCC	6	+	48987590-48987639	6qB2.3	Mus musculus glycoprotein (transmembrane) nmb (Gpnmb), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]	ipd; Dchil	ipd; Dchil
Mus musculus	RefSeq	ILMN_184856	ILMN_184856	UBXN4	NM_026390.2	NM_026390.2		67812	85861251	NM_026390.2	Ubxn4	NP_080666.2	ILMN_2422153	003370554	S	1704	CGAGGGGAAGACTTTAAAAAAGAAGGGAAAATATACAGACTGAGGACTCA	1	+	130173565-130173614	1qE4	Mus musculus UBX domain protein 4 (Ubxn4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]		1300013G12Rik; mKIAA0242; KIAA0242	1300013G12Rik; mKIAA0242; KIAA0242
Mus musculus	RefSeq	ILMN_243984	ILMN_243984	ATXN7L1	NM_001033436.1	NM_001033436.1		380753	75677459	NM_001033436.1	Atxn7l1	NP_001028608.1	ILMN_3160468	001660615	S	2220	TGGGCAGCGCCCTTGTTTGGCCAGGTGGCTCAGACAGGTAACACACACAT	12	+	34052831-34052880	12qA3	Mus musculus ataxin 7-like 1 (Atxn7l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_191372	ILMN_191372	TXNL4A	NM_025299.3	NM_025299.3		27366	109255208	NM_025299.3	Txnl4a	NP_079575.1	ILMN_2478523	004490632	S	473	AAATGGTTGACATCATAGAGACCGTGTACCGTGGCGCCCGCAAAGGCCGG	18	+	80418992-80419041	18qE3	Mus musculus thioredoxin-like 4A (Txnl4a), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Ribonucleoprotein complex containing small nuclear RNA U5; a component of both the major and minor spliceosome complexes [goid 5682] [evidence TAS]; Ribonucleoprotein complex containing small nuclear RNA U5; a component of both the major and minor spliceosome complexes [goid 5682] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	U5-15kDa; U5-15kD; D18Wsu98e; Dim1	U5-15kDa; U5-15kD; D18Wsu98e; Dim1
Mus musculus	RefSeq	ILMN_199269	ILMN_199269	LOC236136	XM_142678.1	XM_142678.1			20981192	XM_142678.1	LOC236136		ILMN_2534639	004890132	S	157	TCGGAGAGGTCAACTTCAGCTGCAGAGTCTGTGGCGGCTGCGAGCCGGGG										
Mus musculus	MEEBO	ILMN_222499	ILMN_222499	5730493B19RIK	scl35386.1.1_202	NM_027488.1			13386231	NM_027488.1	5730493B19Rik		ILMN_2750510	004760088	S	1571	GGGACAGCCTTGCTATTTATTAGCTCAGGTTAGTAGCTGCTGTTGTTTCT										
Mus musculus	MEEBO	ILMN_224189	ILMN_224189	LY6E	scl017069.4_4				31982210	NM_008529	Ly6e		ILMN_2776278	004780184	S	914	AAGATTCTACAGCAGAAGGCCTGTGTCGCCACCAAAACCCCTCCCCCTGG						Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The regulated release of epinephrine by a cell or group of cells. Epinephrine is a catecholamine hormone secreted by the adrenal medulla and a neurotransmitter, released by certain neurons and active in the central nervous system [goid 48242] [evidence IMP]; The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42415] [evidence IMP]			
Mus musculus	Riken	ILMN_203875	ILMN_203875	A630034D18RIK	ri|A630034D18|PX00145O15|AK041747|1316					AK041747	A630034D18Rik		ILMN_2560631	006290360	S	1168	CCTTAGCTGCGTAGTAAGGTCCAGGCCAGCTGGGTTACATGAAACTCTGC										
Mus musculus	RefSeq	ILMN_200522	ILMN_200522	LOC384334	XM_357580.1	XM_357580.1			38083143	XM_357580.1	LOC384334		ILMN_1251715	007570136	S	527	CCCTACGACCCTTACAGTGTCTACCAGAATGTGAGCAAAACCGAGGGGGC										
Mus musculus	RefSeq	ILMN_220013	ILMN_319238	2610021A01RIK	XR_031644.1	XR_031644.1		668572	149257104	XR_031644.1	2610021A01Rik		ILMN_2716416	000380491	S	563	ATGAAGAACCCTCCATTGCAGGCATAAAGGAGTTAAAAGGCATAGAACCA				7qB3	PREDICTED: Mus musculus RIKEN cDNA 2610021A01 gene (2610021A01Rik), misc RNA.					
Mus musculus	Riken	ILMN_206428	ILMN_206428	TOP2A	ri|C230053N18|PX00175B11|AK082477|3143					AK082477	Top2a		ILMN_1242235	001340114	S	2859	GAGTGCTCTGACTTAGCGTGTGCAGGACCTTGCCATTAAGCCTGACAACC						A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells [goid 30261] [evidence IMP]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IMP]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA [goid 3916] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IGI]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IDA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IGI]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_215497	ILMN_215497	ASPA	NM_023113.4	NM_023113.4		11484	142354273	NM_023113.4	Aspa	NP_075602.2	ILMN_1234740	006760687	S	1232	GAAAGGATAAATTAATGAACGTCTTTCAAATATATTTTGGATGTGCTATG	11	-	73118742-73118791	11qB4	Mus musculus aspartoacylase (Aspa), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving acetate, the anion of acetic acid [goid 6083] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid [goid 4046] [evidence TAS]; Catalysis of the reaction: N-acyl-L-aspartate + H2O = a fatty acid anion + L-aspartate [goid 19807] [evidence IEA]	Acy-2; Acy2	Acy-2; Acy2
Mus musculus	RefSeq	ILMN_253974	ILMN_253974	NUP85	NM_001002929.3	NM_001002929.3		445007	108773812	NM_001002929.3	Nup85	NP_001002929.3	ILMN_2890574	001300477	S	1869	GAGCAGACATATGAGCTGATGCGGTGCCTGGAAGACTTGGCCTCAGGGAG	11	+	115444655-115444704	11qE2	Mus musculus nucleoporin 85 (Nup85), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; The movement of a macrophage in response to an external stimulus [goid 48246] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with a CCR2 chemokine receptor [goid 31727] [evidence ISA]	MGC105225; Pcnt1; frount	MGC105225; Pcnt1; frount
Mus musculus	RefSeq	ILMN_186659	ILMN_252572	DHH	NM_007857.3	NM_007857.3		13363	142353160	NM_007857.3	Dhh	NP_031883.1	ILMN_2595664	001500112	S	2171	CTTGGAGTCCTCTATTGTTAGCTATTCTGGCCTATCCCTGTAGGCTGTCC	15	-	98723604-98723653	15qF1	Mus musculus desert hedgehog (Dhh), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The removal of an internal amino acid sequence (an intein) from a protein during protein maturation; the excision of inteins is precise and the N- and C-terminal exteins are joined by a normal peptide bond. Protein splicing involves 4 nucleophilic displacements by the 3 conserved splice junction residues [goid 16539] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis [goid 33327] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis [goid 33327] [evidence IGI]; The specification of male sex of an individual organism [goid 30238] [evidence IGI]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events [goid 22402] [evidence IGI]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 50810] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	C78960	C78960
Mus musculus	MEEBO	ILMN_224125	ILMN_224125	RRAGD	scl052187.5_16				27229104	NM_027491	Rragd		ILMN_2775202	003120139	S	805	ATTTAAAAGAGGTCACAAAGTTCTTGGCGCTCGTTTGCTTCGTCAGAGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	MEEBO	ILMN_187704	ILMN_187704	LOC98434	scl15963.1.277_98						LOC98434		ILMN_2446405	006520246	S	16	CTTCTATGAGGAGACAACATCTGGGCCTTATTCAATAGCCTGTGGTGGGT										
Mus musculus	RefSeq	ILMN_212891	ILMN_212891	NUP37	NM_028334.3	NM_028334.3		69736	146141097	NM_028334.3	Nup37	NP_082610.1	ILMN_1220943	003400170	S	38	TGCTTCCCCAGGGGCGCTTCCCTGTTCTCCAGAGCTCTTCCTTGTGACCT				10qC1	Mus musculus nucleoporin 37 (Nup37), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		2410003L22Rik; 2810039M17Rik	2410003L22Rik; 2810039M17Rik
Mus musculus	Riken	ILMN_202659	ILMN_202659	A330106H01RIK	ri|A330106H01|PX00064E13|AK020737|597					AK020737	A330106H01Rik		ILMN_1227198	007550528	S	501	GTGGGCAGACTTTGGGGCCAGGTTCTAGGTCAAAGCATGGGAACCCCAGA										
Mus musculus	RefSeq	ILMN_235585	ILMN_235585	OLFR257	NM_207554.1	NM_207554.1		404314	46430559	NM_207554.1	Olfr257	NP_997437.1	ILMN_2795377	004880349	S	283	TGTCTGGCCCAGGCCTTCTTTGTGTTTGCCATTGGGGGTACCGAGGCTTT					Mus musculus olfactory receptor 257 (Olfr257), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	MEEBO	ILMN_196268	ILMN_196268	4933411O13RIK	scl071135.1_102						4933411O13Rik		ILMN_2523177	001450152	S	3	ATTTTAGTCTGAATTTTAAGTACTAGTTATTGATTTAATTTAGCATCTAT										
Mus musculus	RefSeq	ILMN_219281	ILMN_244470	ARRDC5	NM_029799.1	NM_029799.1		76920	110626085	NM_029799.1	Arrdc5	NP_084075.1	ILMN_2706727	007400382	S	637	CAATCACACGGGCAAGTACATCAAGACCGTGGTGTTCGCCCTCTATGCCC	17	-	56433903-56433952	17qD	Mus musculus arrestin domain containing 5 (Arrdc5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC118336; 1700013E09Rik	MGC118336; 1700013E09Rik
Mus musculus	RefSeq	ILMN_197124	ILMN_197124	LOC226948	XM_136628.2	XM_136628.2			38074187	XM_136628.2	LOC226948		ILMN_1229815	004640767	S	1469	GCAGCAGTCGAAGTGGTAGAGTTGACCATGGCAGCAGCATAGGATTTGCT										
Mus musculus	RefSeq	ILMN_209142	ILMN_209142	RNF220	NM_025739.2	NM_025739.2		66743	37059807	NM_025739.2	Rnf220	NP_080015.3	ILMN_1232532	006510750	S	1599	TGCACAGGAGAAGAGCCTGGTGAAGCCAAGGAGAGAGAGGCACTCCGGGG	4	-	116950359-116950408	4qD1-qD2.1	Mus musculus ring finger protein 220 (Rnf220), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4732477A13; 5730503K05Rik; AV302541	4732477A13; 5730503K05Rik; AV302541
Mus musculus	RefSeq	ILMN_209142	ILMN_209142	RNF220	NM_025739.2	NM_025739.2		66743	37059807	NM_025739.2	Rnf220	NP_080015.3	ILMN_1243591	000580692	S	2378	TAGACTGTGTATGTTTACAATGTTGTGTATAAATGGGACACTTTGCCCTC	4	-	116944532-116944581	4qD1-qD2.1	Mus musculus ring finger protein 220 (Rnf220), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4732477A13; 5730503K05Rik; AV302541	4732477A13; 5730503K05Rik; AV302541
Mus musculus	RefSeq	ILMN_216850	ILMN_216850	CBS	NM_144855.2	NM_144855.2		12411	118130062	NM_144855.2	Cbs	NP_659104.1	ILMN_2701582	000430500	S	2013	CTATGCCCGAGTAGCTTACAGGGCCTTTCCTCTGGTGTCACAGAACTGAG	17	-	31749944-31749993	17qB1	Mus musculus cystathionine beta-synthase (Cbs), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine [goid 6535] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cysteine, via the intermediate cystathionine [goid 19343] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of JUN kinase activity [goid 43506] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cysteine, 2-amino-3-mercaptopropanoic acid [goid 19344] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: L-serine + L-homocysteine = cystathionine + H2O [goid 4122] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MGC37300; MGC18895; AI047524; AI303044; MGC18856; HIP4	MGC37300; MGC18895; AI047524; AI303044; MGC18856; HIP4
Mus musculus	RefSeq	ILMN_218764	ILMN_328343	ASPRV1	NM_026414.2	NM_026414.2		67855	130502129	NM_026414.2	Asprv1	NP_080690.2	ILMN_2699923	005260392	S	1276	GGACCCTTTTAGATCCCCTGAAGTATGGCTCAGTCACTTTCACGTCCCCA	6	+	86579443-86579492	6qD1	Mus musculus aspartic peptidase, retroviral-like 1 (Asprv1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IDA]	2300003P22Rik; SASPase; AA986851; SASP; Taps	2300003P22Rik; SASPase; AA986851; SASP; Taps
Mus musculus	RefSeq	ILMN_221160	ILMN_221160	MED17	NM_144933.1	NM_144933.1		234959	21450344	NM_144933.1	Med17	NP_659182.1	ILMN_2731721	000020195	S	3473	GCCAATTCTGATACATGACAGCTGGAGGAATGAGCCTTCACTGCCCTGGT	9	-	15065172-15065221	9qA2	Mus musculus mediator complex subunit 17 (Med17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]	Crsp6; C330002H14Rik; Trap80; 77kDa	Crsp6; C330002H14Rik; Trap80; 77kDa
Mus musculus	RefSeq	ILMN_213166	ILMN_213166	1110002B05RIK	NM_134054.2	NM_134054.2		104725	114145570	NM_134054.2	1110002B05Rik	NP_598815.2	ILMN_2634338	002000041	S	1108	GACCCTGTATACGCTCAAGAGTTAATTTGATGTTGTAACAGGCGTTGTGA	12	-	55746566-55746615	12qC1	Mus musculus RIKEN cDNA 1110002B05 gene (1110002B05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA409588; AU041967; AA407909	AA409588; AU041967; AA407909
Mus musculus	RefSeq	ILMN_249127	ILMN_249127	LOC654842	NM_001081681.1	NM_001081681.1		654842	126157522	NM_001081681.1	LOC654842	NP_001075150.1	ILMN_2848588	006510152	S	524	TTGGGAACAGTGCTGATGCGGTGCCTGCTCCAGTGATCGCCTCAGAAGCA					Mus musculus hypothetical protein LOC654842 (LOC654842), mRNA.					
Mus musculus	RefSeq	ILMN_188506	ILMN_237764	COL2A1	NM_031163.2	NM_031163.2		12824	70980519	NM_031163.2	Col2a1	NP_112440.1	ILMN_2759142	006770603	S	4315	CCCTGAAGGATGGCTGCACGAAACACACTGGTAAGTGGGGCAAGACCGTC	15	-	97806587-97806617:97807073-97807091	15qF1	Mus musculus procollagen, type II, alpha 1 (Col2a1), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]; A collagen homotrimer of alpha1(II) chains; type II collagen triple helices associate to form fibrils [goid 5585] [evidence IMP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; A homeostatic process involved in the maintenance of an internal equilibrium within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function [goid 1894] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]	Col2a-1; MGC90638; Col2a; Del1; Dmm	Col2a-1; MGC90638; Col2a; Del1; Dmm
Mus musculus	RefSeq	ILMN_188506	ILMN_237764	COL2A1	NM_031163.2	NM_031163.2		12824	70980519	NM_031163.2	Col2a1	NP_112440.1	ILMN_1246054	004610152	S	4528	CCCAAACACTTTCCAACCGCAGTCACTCCAGGATCTGCACTGAATGGCTG	15	-	97806374-97806423	15qF1	Mus musculus procollagen, type II, alpha 1 (Col2a1), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]; A collagen homotrimer of alpha1(II) chains; type II collagen triple helices associate to form fibrils [goid 5585] [evidence IMP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; A homeostatic process involved in the maintenance of an internal equilibrium within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function [goid 1894] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]	Col2a-1; MGC90638; Col2a; Del1; Dmm	Col2a-1; MGC90638; Col2a; Del1; Dmm
Mus musculus	Riken	ILMN_204526	ILMN_204526	B230353J12RIK	ri|B230353J12|PX00161C15|AK046216|1415					AK046216	B230353J12Rik		ILMN_2565653	005700736	S	1061	GTGTTTGTGGCCTCTCAGAGAAGGATGCATACCTGTTTCCAAGCACAGAC										
Mus musculus	Riken	ILMN_202990	ILMN_202990	6530405K15RIK	ri|6530405K15|PX00048N14|AK032664|2762					AK032664	6530405K15Rik		ILMN_1242512	003830050	S	1838	ACAGATTTGAGCCTCACAGATCCAGTTCCAGCTGTGGACCTTGACTTTCG										
Mus musculus	MEEBO	ILMN_189742	ILMN_189742	3110052M02RIK	scl0073229.1_325				51770028	XM_484601	3110052M02Rik		ILMN_2463969	005690296	S	4	GTTTTGCTTATGGATGATTACTTCTTAGTTCTCCCGTATTTATCTACTTT										
Mus musculus	MEEBO	ILMN_189742	ILMN_189742	3110052M02RIK	scl0073229.1_325				51770028	XM_484601	3110052M02Rik		ILMN_2463970	002710097	S	5	TTTTGCTTATGGATGATTACTTCTTAGTTCTCCCGTATTTATCTACTTTC										
Mus musculus	RefSeq	ILMN_198037	ILMN_198037	LOC270589	XM_193524.2	XM_193524.2			38080768	XM_193524.2	LOC270589		ILMN_1233982	002100221	S	361	ACCCAAAGCGAGGCAACGCTGGAGATAGAAACCCTAGGAAGGAGATCTGG										
Mus musculus	RefSeq	ILMN_215725	ILMN_215725	SLN	NM_025540.2	NM_025540.2		66402	124376991	NM_025540.2	Sln	NP_079816.1	ILMN_2918875	002030451	S	321	CTCCTCCAGCATCTCTGACCCACACTCACAATGCCTGACACACCGCTGCA	9	+	53701457-53701506	9qA5.3	Mus musculus sarcolipin (Sln), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]		Modulates the activity of an enzyme [goid 30234] [evidence IEA]	2310045A07Rik	2310045A07Rik
Mus musculus	RefSeq	ILMN_209193	ILMN_209193	ITPA	NM_025922.2	NM_025922.2		16434	31982663	NM_025922.2	Itpa	NP_080198.2	ILMN_1259292	001980255	S	1060	GGTTGAAGGTTTGGCAAAGAAACACACAACTTTTGGTTTTAGAATATAGC	2	+	130507251-130507300	2qF1	Mus musculus inosine triphosphatase (nucleoside triphosphate pyrophosphatase) (Itpa), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Catalysis of the reaction: H2O + a nucleoside triphosphate = pyrophosphate + a nucleotide [goid 47429] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AU020102; 2010016I08Rik; Itp	AU020102; 2010016I08Rik; Itp
Mus musculus	RefSeq	ILMN_216473	ILMN_257283	C1QL2	NM_207233.1	NM_207233.1		226359	46402220	NM_207233.1	C1ql2	NP_997116.1	ILMN_2671473	003400433	S	1923	CCAACAAACAGAAAGTTCACCTTGTCATGCACACTCTCCATATCCTCCTC	1	+	122239674-122239723	1qE2.3	Mus musculus complement component 1, q subcomponent-like 2 (C1ql2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC040774; MGC49730	BC040774; MGC49730
Mus musculus	RefSeq	ILMN_196945	ILMN_196945	LOC208347	XM_136799.2	XM_136799.2			38050368	XM_136799.2	LOC208347		ILMN_1247632	000520373	S	1362	CCATAGCCTGTTGGAGATCAGTAGATGGATTTGACACAGTGAGGGTCTGC										
Mus musculus	RefSeq	ILMN_258443	ILMN_258443	SEL1L	NM_001039089.1	NM_001039089.1		20338	84875512	NM_001039089.1	Sel1l	NP_001034178.1	ILMN_3137920	003990360	A	6074	TGACCACTAGAGATGTTGAGGGACATGCTTAAAGAGCATAAGCTGACGTC	12	-	93044659-93044708	12qD3	Mus musculus sel-1 suppressor of lin-12-like (C. elegans) (Sel1l), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW493766; Sel1h; KIAA4137; mKIAA4137	AW493766; Sel1h; KIAA4137; mKIAA4137
Mus musculus	RefSeq	ILMN_217120	ILMN_258443	SEL1L	NM_001039089.1	NM_001039089.1		20338	84875512	NM_001039089.1	Sel1l	NP_001034178.1	ILMN_1244431	005260019	S	3618	GGCTGTAGAAAGTCAGCCACTGAGTAGCTGTTGTGTTATCGCCCTTCTGT	12	-	93047115-93047164	12qD3	Mus musculus sel-1 suppressor of lin-12-like (C. elegans) (Sel1l), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW493766; Sel1h; KIAA4137; mKIAA4137	AW493766; Sel1h; KIAA4137; mKIAA4137
Mus musculus	RefSeq	ILMN_258443	ILMN_258443	SEL1L	NM_001039089.1	NM_001039089.1		20338	84875512	NM_001039089.1	Sel1l	NP_001034178.1	ILMN_3060512	003370747	I	531	TGAGTGCACCTCAGACGGGAGGGAAGATGGCAGACTGTGGTGTGCCACAA	12	-	93071536-93071585	12qD3	Mus musculus sel-1 suppressor of lin-12-like (C. elegans) (Sel1l), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW493766; Sel1h; KIAA4137; mKIAA4137	AW493766; Sel1h; KIAA4137; mKIAA4137
Mus musculus	RefSeq	ILMN_190740	ILMN_190740	WNT9A	NM_139298.2	NM_139298.2		216795	70778750	NM_139298.2	Wnt9a	NP_647459.1	ILMN_2472856	004610615	S	971	GGCCGCAGGTGTCACCGGGAGAAGAACTGTGAGAGTATTTGTTGTGGCCG	11	+	59144707-59144756	11qB1.3	Mus musculus wingless-type MMTV integration site 9A (Wnt9a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte differentiation [goid 32331] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte differentiation [goid 32331] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the arm are generated and organized. Morphogenesis pertains to the creation of form. In humans, the arms are the two upper limbs of the body from the shoulder to the hand [goid 35117] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Wnt14	Wnt14
Mus musculus	RefSeq	ILMN_228295	ILMN_228295	1700029F12RIK	NM_001080777.1	NM_001080777.1		66479	124107620	NM_001080777.1	1700029F12Rik	NP_001074246.1	ILMN_3116055	001770504	A	235	CCGGAGAACCAATGTCACATGGACGGCCAACACTGCCTGTAGCCACTGCT	13	-	97800274-97800323	13qD1	Mus musculus RIKEN cDNA 1700029F12 gene (1700029F12Rik), transcript variant 1, mRNA.					
Mus musculus	MEEBO	ILMN_223161	ILMN_223161	4930438A08RIK	scl41521.1.2_20	XM_126175.2			38091363	XM_126175.2	4930438A08Rik		ILMN_2760095	006450088	S	1697	GCAGGGGAGCACACAGATCTGCCTCATGGCTGGATCGACACTGCTATCAA										
Mus musculus	RefSeq	ILMN_208730	ILMN_208730	BRP44	NM_027430.1	NM_027430.1		70456	21312593	NM_027430.1	Brp44	NP_081706.1	ILMN_2895991	000010546	S	763	CCAGTCTGTCTTTACATTTGCCTCAAGGGGACTTGCTTGTGGATGGCACC	1	+	167317798-167317847	1qH2.3	Mus musculus brain protein 44 (Brp44), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			ESTM43; 2610205H19Rik; 2010002I07Rik; AA108335; 0610006C01Rik	ESTM43; 2610205H19Rik; 2010002I07Rik; AA108335; 0610006C01Rik
Mus musculus	RefSeq	ILMN_216256	ILMN_247386	BTBD1	NM_146193.2	NM_146193.2		83962	83649718	NM_146193.2	Btbd1	NP_666305.2	ILMN_1257078	002100598	S	2693	GGGAACTGTTTTCAGTCTGCTCTGGTACTATGATCTTATGGGTCTAAGCC	7	-	88937218-88937267	7qD3	Mus musculus BTB (POZ) domain containing 1 (Btbd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1190005H08Rik; MGC37676	1190005H08Rik; MGC37676
Mus musculus	RefSeq	ILMN_199964	ILMN_199964	LOC384118	XM_357435.1	XM_357435.1			38079253	XM_357435.1	LOC384118		ILMN_2537111	002570470	S	303	GAGTCCACCACATGAAGCAGAAGAGAACTGGGGTCCACAACAGGAAGTGG										
Mus musculus	MEEBO	ILMN_189121	ILMN_189121	A930019L04RIK	scl0109309.1_15						A930019L04Rik		ILMN_2458545	002060470	S	7	CATCTGGAAAGTTGAGTCTGTCGTCAGCCTGTGCTAAGCTGGCTGGGCAC										
Mus musculus	RefSeq	ILMN_196564	ILMN_196564	DSCR6	NM_133229.1	NM_133229.1		170765	18875389	NM_133229.1	Dscr6	NP_573492.1	ILMN_2691557	004670082	S	1312	GGGTTAATTCTTATTACTTGGTGACCAGCCTGGTCTTGTTATTTGCATGA	16	+	94557708-94557757	16qC4	Mus musculus Down syndrome critical region homolog 6 (human) (Dscr6), mRNA.				Ripply3	Ripply3
Mus musculus	RefSeq	ILMN_208839	ILMN_208839	KLK10	NM_133712.2	NM_133712.2		69540	118130936	NM_133712.2	Klk10	NP_598473.1	ILMN_1243407	006560402	S	842	ATGACACCCTGCATGGCGTCCTCTCGTGGGGCATTTACCCATGTGGTGCT	7	+	51040268-51040317	7qB4	Mus musculus kallikrein related-peptidase 10 (Klk10), mRNA.				2300002A13Rik; NES1; PRSSL1	2300002A13Rik; NES1; PRSSL1
Mus musculus	RefSeq	ILMN_190004	ILMN_248311	APAF1	NM_001042558.1	NM_001042558.1		11783	110347464	NM_001042558.1	Apaf1	NP_001036023.1	ILMN_2466335	002760341	S	6334	GCGGCCTGCATGACCACTTGTGGCCCTTTCCTTGCTGAACTTTTTATGTG	10	-	90452229-90452278	10qC2	Mus musculus apoptotic peptidase activating factor 1 (Apaf1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence TAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 16505] [evidence IPI]	fog; 6230400I06Rik; Apaf-1; KIAA0413; Apaf1l; mKIAA0413	fog; 6230400I06Rik; Apaf-1; KIAA0413; Apaf1l; mKIAA0413
Mus musculus	RefSeq	ILMN_214640	ILMN_248311	APAF1	NM_001042558.1	NM_001042558.1		11783	110347464	NM_001042558.1	Apaf1	NP_001036023.1	ILMN_1228561	002370193	S	5037	CTCTGGCTGTCAGTGTCTGTGAATTGGGCACCAACCACCTTGCACTCTTT	10	-	90453526-90453575	10qC2	Mus musculus apoptotic peptidase activating factor 1 (Apaf1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence TAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 16505] [evidence IPI]	fog; 6230400I06Rik; Apaf-1; KIAA0413; Apaf1l; mKIAA0413	fog; 6230400I06Rik; Apaf-1; KIAA0413; Apaf1l; mKIAA0413
Mus musculus	RefSeq	ILMN_248311	ILMN_248311	APAF1	NM_001042558.1	NM_001042558.1		11783	110347464	NM_001042558.1	Apaf1	NP_001036023.1	ILMN_3143577	001990639	A	6327	TGCTCTGGCGGCCTGCATGACCACTTGTGGCCCTTTCCTTGCTGAACTTT	10	-	90452236-90452285	10qC2	Mus musculus apoptotic peptidase activating factor 1 (Apaf1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence TAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 16505] [evidence IPI]	fog; 6230400I06Rik; Apaf-1; KIAA0413; Apaf1l; mKIAA0413	fog; 6230400I06Rik; Apaf-1; KIAA0413; Apaf1l; mKIAA0413
Mus musculus	Riken	ILMN_202884	ILMN_202884	A130098D12RIK	ri|A130098D12|PX00126J01|AK038359|1171					AK038359	A130098D12Rik		ILMN_1252693	006650753	S	972	GAAACCGCCCGTTCCCTCGATCTAAGCCATATACACCAAAGGGCTGACAG										
Mus musculus	Riken	ILMN_207374	ILMN_207374	C330036H15RIK	ri|C330036H15|PX00667F07|AK082832|2194					AK082832	C330036H15Rik		ILMN_1256100	001230053	S	2100	GTCTCAGTGCAGAGGGCAGAAGTGGGAGCGGCAGACTGTATCATTGTTGG										
Mus musculus	RefSeq	ILMN_209835	ILMN_209835	AP4M1	NM_021392.2	NM_021392.2		11781	31981142	NM_021392.2	Ap4m1	NP_067367.2	ILMN_2856646	004610092	S	1283	AGGCTCTCAACTCTCCGGCCTTTTCCAGATGGATGTCCCTGGCTTGCAGG	5	+	138407944-138407968:138408065-138408089	5qG2	Mus musculus adaptor-related protein complex AP-4, mu 1 (Ap4m1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ap4m4; 4930443L05Rik	Ap4m4; 4930443L05Rik
Mus musculus	RefSeq	ILMN_200323	ILMN_200323	LOC386234	XM_359129.1	XM_359129.1			38081314	XM_359129.1	LOC386234		ILMN_2588072	004290725	S	125	CGTATACATGTGTGAGCAGTGACCCGTATACATGTGTGAGCAGTGACCCG										
Mus musculus	Riken	ILMN_204838	ILMN_204838	A130022G24RIK	ri|A130022G24|PX00121F06|AK037506|1714					AK037506	A130022G24Rik		ILMN_1243022	004120338	S	1627	CTTAGAGGTAAAGGGGAGGGGGGGCTTGTGGAAGGCAAACAGGGAAGAGG										
Mus musculus	RefSeq	ILMN_197044	ILMN_197044	LOC329305	XM_287066.1	XM_287066.1			28483678	XM_287066.1	LOC329305		ILMN_2526703	006520279	S	442	GACAGCTGCCTTGGCACTTGGGGATGAAGCAATGAATGGTCCCTGAGCCC										
Mus musculus	RefSeq	ILMN_215849	ILMN_215849	RAD51	NM_011234.2	NM_011234.2		19361	31981526	NM_011234.2	Rad51	NP_035364.1	ILMN_2881050	006480739	S	1764	GTTCTGCTGCTAATAAAGTAGTTGTGTGCAGTGGATGTGTTATTTGCTGG	2	+	118827137-118827186	2qE5	Mus musculus RAD51 homolog (S. cerevisiae) (Rad51), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]	The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence ISO]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IDA]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rad51a; Reca; AV304093	Rad51a; Reca; AV304093
Mus musculus	RefSeq	ILMN_209914	ILMN_209914	FLT3L	NM_013520.2	NM_013520.2		14256	31982427	NM_013520.2	Flt3l	NP_038548.2	ILMN_2600397	005340053	S	761	TGCCCCCAAGGAGTCCCATAGCCCTAGAAGCCACGGAGCTCCCAGAGCCT	7	-	52387697-52387746	7qB4	Mus musculus FMS-like tyrosine kinase 3 ligand (Flt3l), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby a relatively unspecialized precursor cell acquires specialized features of B cells, T cells, or natural killer cells [goid 30098] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Flt3lg; Ly72L	Flt3lg; Ly72L
Mus musculus	RefSeq	ILMN_191927	ILMN_191927	ZFML	NM_008717.1	NM_008717.1		18139	6679097	NM_008717.1	Zfml	NP_032743.1	ILMN_2930933	000240220	S	5967	GCTCCCTCTTCTACTCAGGTGAAAAAGCAATGGCAAATCACTGCAAGAGC	6	+	83950480-83950529	6qC3	Mus musculus zinc finger, matrin-like (Zfml), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI323587; mNP220; Np220	AI323587; mNP220; Np220
Mus musculus	Riken	ILMN_202017	ILMN_202017	2810405N18RIK	ri|2810405N18|ZX00046M20|AK013005|1614					AK013005	2810405N18Rik		ILMN_1235449	000610561	S	1373	TGGCAGCGCCCATTGCTCCACTGTCTTCTGAACAGGGATTGCTGGGAGTC										
Mus musculus	Riken	ILMN_202643	ILMN_202643	C030047E14RIK	ri|C030047E14|PX00075E08|AK021156|717					AK021156	C030047E14Rik		ILMN_2551185	007000288	S	487	ACTGTGCAGGGTCAGAGACTGGGATGTTGGGGTTCAACAGGGTCCAGCCC										
Mus musculus	RefSeq	ILMN_224175	ILMN_242783	GAL	NM_010253.3	NM_010253.3		14419	118129967	NM_010253.3	Gal	NP_034383.1	ILMN_2776034	004390288	S	567	CATTCTAGGCTAAGAAGAATCTTCTGCCAACTCCTCAAGCCAATCGTCTG	19	-	3409999-3410048	19qA	Mus musculus galanin (Gal), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Galn	Galn
Mus musculus	RefSeq	ILMN_200731	ILMN_200731	LOC381835	XM_355840.1	XM_355840.1			38085684	XM_355840.1	LOC381835		ILMN_2539803	000520301	S	800	TGGGACCAGTTTGCACCCCCAGCTCTGACCTTGCTCCAGGGACTTCTGGA										
Mus musculus	RefSeq	ILMN_232095	ILMN_232095	RPL12	NM_009076.1	NM_009076.1		269261	6677768	NM_009076.1	Rpl12	NP_033102.1	ILMN_2874228	001050209	S	313	GGCCTGATCATCAAAGCCCTCAAGGAGCCACCGAGAGACAGGAAGAAGCA	2	+	32785019-32785068		Mus musculus ribosomal protein L12 (Rpl12), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC102573; E430018F03; MGC102182	MGC102573; E430018F03; MGC102182
Mus musculus	RefSeq	ILMN_198160	ILMN_198160	LOC381095	XM_358506.1	XM_358506.1			38082294	XM_358506.1	LOC381095		ILMN_1215942	002060324	S	477	TGGAATGGGTTCGCCCTTGAAAAGCCGGGGAGAGGGTGTAAATCTCGCGC										
Mus musculus	RefSeq	ILMN_202697	ILMN_211688	RAB7	NM_009005.2	NM_009005.2		19349	148747525	NM_009005.2	Rab7	NP_033031.2	ILMN_1257810	000670382	S	259	CCAGAACACAGCAATCTGCACCTCTGTAGAAGGCCACACCAAGAGACTGG				6qD1	Mus musculus RAB7, member RAS oncogene family (Rab7), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC102153	MGC102153
Mus musculus	RefSeq	ILMN_198115	ILMN_325376	LOC545750	XR_033380.1	XR_033380.1		545750	149253919	XR_033380.1	LOC545750		ILMN_1212768	000450347	S	1106	AACTGCCTCTGCCTTGGGCATCGTCTCTCTGCGCATCAGGGCTTGGCGCC	5	+	52973697-52973746	5qC1	PREDICTED: Mus musculus similar to solute carrier family 35, member A4 (LOC545750), misc RNA.					
Mus musculus	Riken	ILMN_206080	ILMN_206080	E130309N05RIK	ri|E130309N05|PX00209C17|AK053811|1232					AK053811	E130309N05Rik		ILMN_1236874	003290039	S	1088	AGGGAGATGCTCACAGTGCTCACAGAGTTGCCATTTGGATGGAGGGCAGG										
Mus musculus	MEEBO	ILMN_223989	ILMN_223989	TIMELESS	scl021853.25_130				6755788	NM_011589	Timeless		ILMN_1260427	003850070	S	4148	TTCATATTAAATGTGTACAATTAACAGTTGCTCATCTCAGAGCGGCCAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [pmid 10963667] [evidence IEP]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [pmid 10231394] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221099	ILMN_221099	RPS6KA3	NM_148945.1	NM_148945.1		110651	22507356	NM_148945.1	Rps6ka3	NP_683747.1	ILMN_2731080	000240736	S	2038	TCCACTGGGACCAACTACCACAATACCAACTAAACAGACAGGATGCGCCG	X	+	155800652-155800701	XqF4	Mus musculus ribosomal protein S6 kinase polypeptide 3 (Rps6ka3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	pp90RSK2; Rsk2; MPK-9; S6K-alpha3	pp90RSK2; Rsk2; MPK-9; S6K-alpha3
Mus musculus	MEEBO	ILMN_219009	ILMN_219009	1810057B09RIK	scl47927.5_282	NM_175009.2			31341341	NM_175009.2	1810057B09Rik		ILMN_2703032	005220192	S	2246	AGTCCTAATATATAGGTACAGTTGAGAAAAGGGTTCATCGTCCACACTAC										
Mus musculus	Riken	ILMN_204607	ILMN_204607	5330404D22RIK	ri|5330404D22|PX00053G10|AK030372|2660					AK030372	5330404D22Rik		ILMN_1220434	006560400	S	2331	TTCAGTGGGGAGGAAGGACCAATGTCCATGAAAGCTGTCAGACATGCATC										
Mus musculus	RefSeq	ILMN_210753	ILMN_232744	CCDC90A	NM_001081059.2	NM_001081059.2		76137	148540135	NM_001081059.2	Ccdc90a	NP_001074528.1	ILMN_2608799	005560259	S	773	CAAAGTCCGGACAGATACCAAATTAAACTTCAATCTAGAAAAAAGCAGAG				13qA4	Mus musculus coiled-coil domain containing 90A (Ccdc90a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			AV136929; 6230416A05Rik; C88263; AW554392; AU015498	AV136929; 6230416A05Rik; C88263; AW554392; AU015498
Mus musculus	RefSeq	ILMN_217477	ILMN_217477	RNF167	NM_027445.1	NM_027445.1		70510	28076962	NM_027445.1	Rnf167	NP_081721.1	ILMN_2687744	000870379	S	380	GCCAGCATGGACTTTGCAGACCTTCCAGCTCTGTTTGGGGCCACTCTGAG	11	+	70461546-70461595	11qB3	Mus musculus ring finger protein 167 (Rnf167), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU019305; 5730408C10Rik; AV328608; RP23-326P7.8; 0610010G05Rik	AU019305; 5730408C10Rik; AV328608; RP23-326P7.8; 0610010G05Rik
Mus musculus	RefSeq	ILMN_217477	ILMN_217477	RNF167	NM_027445.1	NM_027445.1		70510	28076962	NM_027445.1	Rnf167	NP_081721.1	ILMN_2892856	003180598	S	1428	CATGAACCCAGCCTCATCCTTTTGAGGGGGCTAGAAGCCATAGGGACATG	11	+	70464820-70464869	11qB3	Mus musculus ring finger protein 167 (Rnf167), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU019305; 5730408C10Rik; AV328608; RP23-326P7.8; 0610010G05Rik	AU019305; 5730408C10Rik; AV328608; RP23-326P7.8; 0610010G05Rik
Mus musculus	RefSeq	ILMN_217477	ILMN_217477	RNF167	NM_027445.1	NM_027445.1		70510	28076962	NM_027445.1	Rnf167	NP_081721.1	ILMN_1214800	005720300	S	589	GGCTGGGTATGGTGCAGCTGTGGTGCACAATGTGAATTCCAATGAACTGC	11	+	70462964-70463013	11qB3	Mus musculus ring finger protein 167 (Rnf167), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU019305; 5730408C10Rik; AV328608; RP23-326P7.8; 0610010G05Rik	AU019305; 5730408C10Rik; AV328608; RP23-326P7.8; 0610010G05Rik
Mus musculus	RefSeq	ILMN_217477	ILMN_217477	RNF167	NM_027445.1	NM_027445.1		70510	28076962	NM_027445.1	Rnf167	NP_081721.1	ILMN_1229534	002510026	S	496	ACCACCCTCAGCCCCGGTCAATGGGTCAGTCTTTATTGCACTGCTTCGAA	11	+	70462773-70462822	11qB3	Mus musculus ring finger protein 167 (Rnf167), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU019305; 5730408C10Rik; AV328608; RP23-326P7.8; 0610010G05Rik	AU019305; 5730408C10Rik; AV328608; RP23-326P7.8; 0610010G05Rik
Mus musculus	RefSeq	ILMN_217477	ILMN_217477	RNF167	NM_027445.1	NM_027445.1		70510	28076962	NM_027445.1	Rnf167	NP_081721.1	ILMN_2892860	006200064	S	1363	GCACAAACTCTTTTTCCAGTCTAATAAGCTGAGGGTGAGGGATAGGGGAC	11	+	70464755-70464804	11qB3	Mus musculus ring finger protein 167 (Rnf167), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU019305; 5730408C10Rik; AV328608; RP23-326P7.8; 0610010G05Rik	AU019305; 5730408C10Rik; AV328608; RP23-326P7.8; 0610010G05Rik
Mus musculus	Riken	ILMN_207386	ILMN_207386	RAB5B	ri|C530035I24|PX00669H11|AK083034|1629					AK083034	Rab5b		ILMN_1237467	006040674	S	1553	GCCTTTGCAGCTGTGTGGCCCCAATATTTATACAGAGGTGGCTGTGCCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence IDA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]		
Mus musculus	MEEBO	ILMN_213879	ILMN_213879	PRG4	scl000882.1_25	XM_355243.1			38073486	XM_355243.1	Prg4		ILMN_2668333	003370201	S	3406	CTGTTGGACCTTTCCAGACACACACCTTCAGGATCCATTACTCGGTGCCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214549	ILMN_256523	EIF2S3X	NM_012010.3	NM_012010.3		26905	118129962	NM_012010.3	Eif2s3x	NP_036140.1	ILMN_2649129	003360100	S	3006	CTCAGTCTTCCCACACTGGCAAAGAGTATAGCAACTGGTGGTTAGTGATA	X	-	91434579-91434628	XqC3	Mus musculus eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked (Eif2s3x), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	AI314668; AA547477; AA409828; Eif-2gx	AI314668; AA547477; AA409828; Eif-2gx
Mus musculus	RefSeq	ILMN_216848	ILMN_216848	AQR	NM_009702.1	NM_009702.1		11834	33859507	NM_009702.1	Aqr	NP_033832.1	ILMN_2676056	000450324	S	4240	CCCCAGATGGCGAACTTTGTGTACAACATGTATATGCATCTGATACAGAC	2	-	113929758-113929807	2qE4	Mus musculus aquarius (Aqr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0560; AW495846	mKIAA0560; AW495846
Mus musculus	RefSeq	ILMN_216848	ILMN_216848	AQR	NM_009702.1	NM_009702.1		11834	33859507	NM_009702.1	Aqr	NP_033832.1	ILMN_2925196	004810497	S	4608	CAGCACAGCCTGGGACATTCCATTTATAAACTCTAAGTGAGGTTACCTTT	2	-	113927116-113927165	2qE4	Mus musculus aquarius (Aqr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0560; AW495846	mKIAA0560; AW495846
Mus musculus	RefSeq	ILMN_199553	ILMN_199553	LOC383624	XM_357163.1	XM_357163.1			38074200	XM_357163.1	LOC383624		ILMN_1232696	005900431	S	1497	GGTGTCAGTTCTCCACTATGCTGTTGCAGTGCTTCACGCTGTTGTCACAG										
Mus musculus	RefSeq	ILMN_213028	ILMN_213028	1810008K16RIK	NM_026109.2	NM_026109.2		67366	71037400	NM_026109.2	1810008K16Rik	NP_080385.2	ILMN_2632811	006180762	S	689	GAAGCTTGTTTAAAATACTGTAAGTGAAAGCAAATAACTTGTACAATATT	5	-	109206278-109206315:109206316-109206327	5qF	Mus musculus RIKEN cDNA 1810008K16 gene (1810008K16Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	Riken	ILMN_202530	ILMN_202530	MRPL15	ri|2410029F03|ZX00081N02|AK010604|1017					AK010604	Mrpl15		ILMN_1216713	006860725	S	3	TCTACGCCGCGTCCTGGGCGCTCTTGAAGCACCGCTGCGTCTGGCTGGCA						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]; The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome [goid 2] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]		
Mus musculus	RefSeq	ILMN_238030	ILMN_238030	NOL10	NM_001008421.1	NM_001008421.1		217431	56606026	NM_001008421.1	Nol10	NP_001008421.1	ILMN_2999642	007560093	S	2858	CTGCTGAGTGGCCCTGTTTATGTGCATGAGTATGTTGGCAGGCTGACTGG	12	+	17436773-17436822	12qA1.1	Mus musculus nucleolar protein 10 (Nol10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC113734; Gm67	MGC113734; Gm67
Mus musculus	RefSeq	ILMN_196862	ILMN_238030	NOL10	NM_001008421.1	NM_001008421.1		217431	56606026	NM_001008421.1	Nol10	NP_001008421.1	ILMN_1256181	002480382	S	1846	AGCAGGCGAAGAGTTCAGGAGCTTCAAAGAGTCTGCCACCAAGCAGAGAC	12	+	17423711-17423760	12qA1.1	Mus musculus nucleolar protein 10 (Nol10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC113734; Gm67	MGC113734; Gm67
Mus musculus	RefSeq	ILMN_210073	ILMN_232024	5033414K04RIK	NM_001003948.1	NM_001003948.1		98496	51556212	NM_001003948.1	5033414K04Rik	NP_001003948.1	ILMN_2601946	000360053	S	2256	CAGACAGCAATGGTGTTAGTATTTTTGGTCTGTGTACCCACGTGCCCATG	1	-	84033175-84033224	1qC5	Mus musculus RIKEN cDNA 5033414K04 gene (5033414K04Rik), mRNA.				MGC90850	MGC90850
Mus musculus	RefSeq	ILMN_221791	ILMN_221791	ANAPC4	NM_024213.1	NM_024213.1		52206	23956181	NM_024213.1	Anapc4	NP_077175.1	ILMN_2859778	006400079	S	2448	GGAAGTGTTGTCAGAGTCAGAGACAGAGGCTCACCAAGACGCTGCTGCCC	5	+	53154762-53154811	5qC1	Mus musculus anaphase promoting complex subunit 4 (Anapc4), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		APC4; D5Ertd249e; 2610306D21Rik	APC4; D5Ertd249e; 2610306D21Rik
Mus musculus	RefSeq	ILMN_235723	ILMN_235723	SLC35F2	NM_028060.2	NM_028060.2		72022	40254174	NM_028060.2	Slc35f2	NP_082336.2	ILMN_3133095	002230215	A	1096	TAAAGTCACGAGTGCCACTTCAGTCAACCTGGGCATCCTGACAGCTGACC	9	+	53658746-53658795	9qA5.3	Mus musculus solute carrier family 35, member F2 (Slc35f2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AU019213; 1500009K05Rik	AU019213; 1500009K05Rik
Mus musculus	MEEBO	ILMN_208642	ILMN_208642	4930529M08RIK	scl20177.7_5	NM_175280.2			31341513	NM_175280.2	4930529M08Rik		ILMN_1238366	005270538	S	3219	AAACTTTTCAAATGGATATTTAAATTTCATCTTAAAAAGAGATTTCTGTG										
Mus musculus	RefSeq	ILMN_261865	ILMN_261865	GM128	NM_001024841.2	NM_001024841.2		229588	114205393	NM_001024841.2	Gm128	NP_001020012.1	ILMN_2837100	004850600	S	1084	GCCTTTTGGAAACGTGTCAGGATTGGCCTGGAGGATATCTGGAACAGCCT				3qF2.1	Mus musculus gene model 128, (NCBI) (Gm128), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_246912	ILMN_246912	TREML4	NM_001033922.1	NM_001033922.1		224840	76677892	NM_001033922.1	Treml4	NP_001029094.1	ILMN_3121765	004670162	A	812	AAGGCAGAACAGGCCAAACTTCCGCTCTACCGAAGCCATCAGGCAAGCCC	17	+	48413858-48413859:48413860-48413907	17qC	Mus musculus triggering receptor expressed on myeloid cells-like 4 (Treml4), transcript variant 1, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IDCP1; BB137214; 5031403H21Rik; TLT4; Treml3	IDCP1; BB137214; 5031403H21Rik; TLT4; Treml3
Mus musculus	RefSeq	ILMN_203204	ILMN_233924	EG666387	XM_983525.1	XM_983525.1		666387	94378030	XM_983525.1	EG666387	XP_988619.1	ILMN_1213362	000380110	S	263	CCCTGCCAGCAGAGAGCATTTTCCTCCCAGAAGAAGGATTTCAACCCCGG	6	+	112896686-112896735	6qE3	PREDICTED: Mus musculus predicted gene, EG666387 (EG666387), mRNA.					
Mus musculus	RefSeq	ILMN_209284	ILMN_209284	SGCB	NM_011890.4	NM_011890.4		24051	141801718	NM_011890.4	Sgcb	NP_036020.1	ILMN_1255256	002190403	S	1093	CCTGGGGAGCACCACTGTGTCTATTATGTACTCTCCATATTTAAGGGATC	5	-	74026572-74026621	5qC3.3	Mus musculus sarcoglycan, beta (dystrophin-associated glycoprotein) (Sgcb), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence TAS]		AI747103; beta-SG; 43kDa; AI844814	AI747103; beta-SG; 43kDa; AI844814
Mus musculus	RefSeq	ILMN_209284	ILMN_209284	SGCB	NM_011890.4	NM_011890.4		24051	141801718	NM_011890.4	Sgcb	NP_036020.1	ILMN_1222716	000060026	S	2475	CACCATGGGCCTAGCTACAGAGAAGGATGTTGGTACTCTGTCATGGTCAC	5	-	74025190-74025239	5qC3.3	Mus musculus sarcoglycan, beta (dystrophin-associated glycoprotein) (Sgcb), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence TAS]		AI747103; beta-SG; 43kDa; AI844814	AI747103; beta-SG; 43kDa; AI844814
Mus musculus	RefSeq	ILMN_205747	ILMN_222664	4933432B09RIK	XM_128197.6	XM_128197.6		75729	94398760	XM_128197.6	4933432B09Rik	XP_128197.4	ILMN_1230261	006450386	S	2344	TGCAGCCACAGTGAAGCTCAGGTCTTTTCTTGGGGTTCTAAGGAAGAGCC	15	-	79462718-79462767	15qE1	PREDICTED: Mus musculus RIKEN cDNA 4933432B09 gene, transcript variant 1 (4933432B09Rik), mRNA.					
Mus musculus	Riken	ILMN_203843	ILMN_203843	CD84	ri|A530016A13|PX00140A14|AK040694|1090					AK040694	Cd84		ILMN_2560379	001450300	S	861	CTTCTGGGGTAGCCTTTCTTCATTGTCTCTCCTGATTCCAAGGAGATAAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201027	ILMN_313330	LOC100042145	XR_032975.1	XR_032975.1		100042145	149273229	XR_032975.1	LOC100042145		ILMN_1259575	000840538	S	725	GAGGAGAGATCAGGAGGTGACAGTGATGTGTTGATAGGTAACTGGGTGCA	Y|NT_166350.1	-	170518-170567		PREDICTED: Mus musculus similar to spermiogenesis specific transcript on the Y 1 (LOC100042145), misc RNA.					
Mus musculus	RefSeq	ILMN_201015	ILMN_313330	LOC100042145	XR_032975.1	XR_032975.1		100042145	149273229	XR_032975.1	LOC100042145		ILMN_1247672	005310706	S	721	GGCTGAGGAGAGATCAGGAGGTGACAGTGATGTGTTGATAGGTAACTGGG	Y|NT_166350.1	-	170522-170571		PREDICTED: Mus musculus similar to spermiogenesis specific transcript on the Y 1 (LOC100042145), misc RNA.					
Mus musculus	RefSeq	ILMN_214207	ILMN_214207	ABCC8	NM_011510.3	NM_011510.3		20927	118130128	NM_011510.3	Abcc8	NP_035640.2	ILMN_2645526	004590347	S	4583	GGGCCTTCGTGAGAAAGACCAGCATCTTCATCATGGACGAAGCAACTGCC	7	-	53361196-53361245	7qB4	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 8 (Abcc8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	SUR1; Sur; D930031B21Rik	SUR1; Sur; D930031B21Rik
Mus musculus	RefSeq	ILMN_194970	ILMN_214207	ABCC8	NM_011510.3	NM_011510.3		20927	118130128	NM_011510.3	Abcc8	NP_035640.2	ILMN_1224187	004290682	S	1472	GAGCAGCTGTCATCATTCTGCTGGCTCCTGTACAGTACTTTGTGGCCACC	7	-	53406935-53406984	7qB4	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 8 (Abcc8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	SUR1; Sur; D930031B21Rik	SUR1; Sur; D930031B21Rik
Mus musculus	RefSeq	ILMN_196558	ILMN_196558	DEFCR5	NM_007851.2	NM_007851.2		13239	113680296	NM_007851.2	Defcr5	NP_031877.2	ILMN_2890534	002340634	S	9	GGCTCCTGCTCAACAATTCTCCAGGTGACCCCCAGCCATGAAGACATTTG	8	+	22437081-22437117:22437118-22437130	8qA2	Mus musculus defensin related cryptdin 5 (Defcr5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	RefSeq	ILMN_232608	ILMN_232608	OLFR1281	NM_001005568.1	NM_001005568.1		257979	53933202	NM_001005568.1	Olfr1281	NP_001005568.1	ILMN_2900131	006770131	S	678	ACATCGCTCTAAAGATGGCTCATCAAAAGCACTATCCACATGCACATCCC	2	+	111169255-111169304	2qE3	Mus musculus olfactory receptor 1281 (Olfr1281), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR248-18; MOR248-14P	MOR248-18; MOR248-14P
Mus musculus	RefSeq	ILMN_198955	ILMN_198955	LOC245015	XM_147063.2	XM_147063.2			38090045	XM_147063.2	LOC245015		ILMN_2533522	000290563	S	320	TACCCAGTGCCCACGATGGAGAGGATGAGAGGCAGTTACCCAGTGCTCAC										
Mus musculus	Riken	ILMN_205053	ILMN_205053	C130076O07RIK	ri|C130076O07|PX00171P15|AK048567|3166					AK048567	C130076O07Rik		ILMN_1240336	002570670	S	1543	GTTGCAGTTGGGGGAGGTAGAGTGGATTCTGAGAGAGTCAGCATGAAGTC										
Mus musculus	RefSeq	ILMN_209458	ILMN_209458	9030409G11RIK	NM_144531.2	NM_144531.2		71529	31542032	NM_144531.2	9030409G11Rik	NP_653114.2	ILMN_1219025	001070673	S	3891	GAGAATTATGACAGCCCTTCCCAGAAGGCCAAGGACCACGTCACAGGTTG	4	-	141658501-141658550	4qE1	Mus musculus RIKEN cDNA 9030409G11 gene (9030409G11Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence ISA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence ISA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		AW061099; AI666764; AI256607; Kazrin; 2310007B04Rik	AW061099; AI666764; AI256607; Kazrin; 2310007B04Rik
Mus musculus	MEEBO	ILMN_223865	ILMN_223865	RING1	scl50033.7.1_0				31982045	NM_009066	Ring1		ILMN_2770715	003440056	S	1610	ACCCTAGTTTCCTACCCTGCTGGTGATAGGCAGGGTGGACAAGACCCCCT						A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]; A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IDA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IGI]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IDA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186690	ILMN_186690	2810029C07RIK	scl072670.1_26						2810029C07Rik		ILMN_2437682	003310056	S	19	GAGATGTAGACTCACCGTAAAGAGCTGGAAGCAGCAAGCATATCTGTGGC										
Mus musculus	RefSeq	ILMN_222935	ILMN_222935	AZI1	NM_009734.1	NM_009734.1		12009	6753153	NM_009734.1	Azi1	NP_033864.1	ILMN_1244993	005490603	S	3349	CATCTCTGAGTTCTAAGTGACATCGCCCTTGGGATGACGAGCCAAGCCTG	11	-	119925917-119925948:119925949-119925966	11qE2	Mus musculus 5-azacytidine induced gene 1 (Azi1), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		AZ1; Azi	AZ1; Azi
Mus musculus	MEEBO	ILMN_189084	ILMN_189084	SEMA3B	scl35371.22_525				6677912	NM_009153	Sema3b		ILMN_1218016	007050110	S	4	GGACTCCTGATGGTTTGGAAGGTAGATCCCACCAGCCCTGCTTTTCACCG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]			
Mus musculus	MEEBO	ILMN_189084	ILMN_189084	SEMA3B	scl35371.22_525				6677912	NM_009153	Sema3b		ILMN_2718096	001070528	S	2778	CAGCAAGCGCAAGCTGTGAACAGATTAGACCGTTGGGTATGGGGTGAGGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]			
Mus musculus	RefSeq	ILMN_223063	ILMN_223063	CPA5	NM_144537.3	NM_144537.3		74649	146149257	NM_144537.3	Cpa5	NP_653120.1	ILMN_2758840	006560292	S	1811	CATGAAACACACCCTGAATCACCCCTATTAGCCACGCTACTCAGGCCGGA				6qA3.3	Mus musculus carboxypeptidase A5 (Cpa5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	4930430M09Rik	4930430M09Rik
Mus musculus	MEEBO	ILMN_195236	ILMN_195236	1700029M20RIK	scl24835.3_89				21312023	NM_028688	1700029M20Rik		ILMN_1258963	005910070	S	2	GCCAGAAGCCTGATGGGAGAATTCATTAATGCCCTTGCCTGACCCTTGAG										
Mus musculus	MEEBO	ILMN_195236	ILMN_195236	1700029M20RIK	scl24835.3_89				21312023	NM_028688	1700029M20Rik		ILMN_2664383	004290167	S	609	CATGGGCACCATTGCCTTCGCCAGGCCGCGGTTTCTTAATGTAGTACTGG										
Mus musculus	Riken	ILMN_204562	ILMN_204562	WWOX	ri|B930001N18|PX00162O17|AK046903|2383					AK046903	Wwox		ILMN_2565934	001780138	S	1933	GGACCCAAAGTCAACATGTTTGTTGACTGCACAGAGATGGGGAGGCAGGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_195924	ILMN_226950	PTN	NM_008973.2	NM_008973.2		19242	118130571	NM_008973.2	Ptn	NP_032999.1	ILMN_2638114	000830397	S	1811	CCTTGAAGACCAGAACTGGCAGCCTGAAGCGAGCTCTGCACAATGCTGAC	6	-	36691338-36691387	6qB1	Mus musculus pleiotrophin (Ptn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IDA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	Osf-1; Osf1; OSF; HBGF-8; HBNF; HARP; HB-GAM; HBBN	Osf-1; Osf1; OSF; HBGF-8; HBNF; HARP; HB-GAM; HBBN
Mus musculus	RefSeq	ILMN_186425	ILMN_227799	RSC1A1	NM_023544.4	NM_023544.4		69994	77404399	NM_023544.4	Rsc1a1	NP_076033.4	ILMN_1230668	005570020	S	1838	CTGCATCGAGTTGGTGGGAATGCAGACCTTGCCCTTCTTGTTTTGTTAGC	4	-	140955950-140955999		Mus musculus regulatory solute carrier protein, family 1, member 1 (Rsc1a1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process by which nutrients are taken up from the contents of the intestine [goid 50892] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 51051] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RP23-83I22.2; 1700027M01Rik; RS1; mRS1	RP23-83I22.2; 1700027M01Rik; RS1; mRS1
Mus musculus	RefSeq	ILMN_186919	ILMN_243796	RAB11FIP1	NM_001080813.1	NM_001080813.1		75767	124249096	NM_001080813.1	Rab11fip1	NP_001074282.1	ILMN_1230584	006770390	S	7646	CCTACCTACTTTGATAAGCTACTAAATTGACTTTCACCTCCCTCTAACGG	8	-	28249516-28249565	8qA2	Mus musculus RAB11 family interacting protein 1 (class I) (Rab11fip1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		2010200K21Rik; MGC159103; Rcp; 4833414G05Rik	2010200K21Rik; MGC159103; Rcp; 4833414G05Rik
Mus musculus	RefSeq	ILMN_186919	ILMN_243796	RAB11FIP1	NM_001080813.1	NM_001080813.1		75767	124249096	NM_001080813.1	Rab11fip1	NP_001074282.1	ILMN_1221771	004850167	S	3740	TGCCACTGTGCCTTTGACTACATTGTAAATATCAGATTTGATCCGATGTG	8	-	28253422-28253471	8qA2	Mus musculus RAB11 family interacting protein 1 (class I) (Rab11fip1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		2010200K21Rik; MGC159103; Rcp; 4833414G05Rik	2010200K21Rik; MGC159103; Rcp; 4833414G05Rik
Mus musculus	Riken	ILMN_205381	ILMN_205381	D130032N22RIK	ri|D130032N22|PX00184M21|AK051312|1229					AK051312	D130032N22Rik		ILMN_2572127	001240364	S	734	GAGCAAGCTGAACCCCCTGAGAAACTGCAAGAACCCTGGAAAAACAGCCT										
Mus musculus	RefSeq	ILMN_203496	ILMN_211715	DNAJC27	NM_153082.3	NM_153082.3		217378	142352689	NM_153082.3	Dnajc27	NP_694722.2	ILMN_1234887	005870102	S	2806	CAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCA	12	+	4108743-4108792	12qA1.1	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 27 (Dnajc27), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	C330021A05Rik; AI639580; Rabj	C330021A05Rik; AI639580; Rabj
Mus musculus	RefSeq	ILMN_211715	ILMN_211715	DNAJC27	NM_153082.3	NM_153082.3		217378	142352689	NM_153082.3	Dnajc27	NP_694722.2	ILMN_2618831	006940692	S	4116	TTCCAGGTCAGCTCAGTAGGTTCTCTCATGCTGCCTCCCATGGAGCTAAG	12	+	4110053-4110102	12qA1.1	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 27 (Dnajc27), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	C330021A05Rik; AI639580; Rabj	C330021A05Rik; AI639580; Rabj
Mus musculus	RefSeq	ILMN_219410	ILMN_219410	ELMO2	NM_080287.2	NM_080287.2		140579	46877042	NM_080287.2	Elmo2	NP_525026.2	ILMN_2708469	005050465	S	4434	CCCCTTCCTTTTGGGTTCCATTTCCTCTGCGATGAACTTCACGTACTCAG	2	-	165113637-165113686	2qH3	Mus musculus engulfment and cell motility 2, ced-12 homolog (C. elegans) (Elmo2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1190002F24Rik; CED-12; mKIAA1834	1190002F24Rik; CED-12; mKIAA1834
Mus musculus	RefSeq	ILMN_244033	ILMN_244033	NDRG2	NM_013864.1	NM_013864.1		29811	7305304	NM_013864.1	Ndrg2	NP_038892.1	ILMN_3001650	001450601	S	1230	GGCCAGAGTAAGCAAGGAAAATGGGCAGATTGTGCAGGGAGATGACCTTG	14	-	52525715-52525764	14qC2	Mus musculus N-myc downstream regulated gene 2 (Ndrg2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		AU040374; AI182517; Ndr2; SYLD	AU040374; AI182517; Ndr2; SYLD
Mus musculus	MEEBO	ILMN_211399	ILMN_211399	FGFR1OP2	scl067529.7_122	NM_026218.1			13385723	NM_026218.1	Fgfr1op2		ILMN_2731360	001240376	S	1759	TCATCATGTTTGAGGATACAAGACAGTTCACCAATAGACAAGAGTTGACA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_217952	ILMN_217952	MRPL39	NM_017404.3	NM_017404.3		27393	148747482	NM_017404.3	Mrpl39	NP_059100.2	ILMN_1249407	000870681	S	948	GACAGAGAACACCGAATCCACCCAGTAGTGTTCTAAAATTTAAACTTGTA				16qC3.3	Mus musculus mitochondrial ribosomal protein L39 (Mrpl39), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]; The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome [goid 2] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	C21orf8; MRP-L5; ORF22; Rpml5	C21orf8; MRP-L5; ORF22; Rpml5
Mus musculus	RefSeq	ILMN_214615	ILMN_214615	SLC33A1	NM_015728.4	NM_015728.4		11416	133892355	NM_015728.4	Slc33a1	NP_056543.2	ILMN_1222499	007050246	S	2150	TACAGGATGAAGGACCATCCTCATGGAAGTGCAAAAGGAACAACTGATGC	3	-	63747167-63747170:63747171-63747216	3qE1	Mus musculus solute carrier family 33 (acetyl-CoA transporter), member 1 (Slc33a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AI788741; AI315656; D630022N01Rik; Acatn	AI788741; AI315656; D630022N01Rik; Acatn
Mus musculus	RefSeq	ILMN_244851	ILMN_244851	RNASE12	NM_001011875.1	NM_001011875.1		497106	59858540	NM_001011875.1	Rnase12	NP_001011875.1	ILMN_3162426	004070053	S	144	TCTCCAGAGGGTCATCAGGGAACCCGACCACAGATGCAGAAAGGTGCATG	14	-	51676702-51676751	14qC1	Mus musculus ribonuclease, RNase A family, 12 (non-active) (Rnase12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196603	ILMN_196603	EAR6	NM_053111.2	NM_053111.2		93719	32891936	NM_053111.2	Ear6	NP_444341.1	ILMN_2871749	004670433	S	461	GCCTGTGAGCCCAGAGTTGCATGGGATTGTCCCATCTATCCAGTGGTTCC	14	+	52474066-52474115	14qC2	Mus musculus eosinophil-associated, ribonuclease A family, member 6 (Ear6), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IDA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence ISS]		
Mus musculus	Riken	ILMN_202937	ILMN_202937	A030006E20RIK	ri|A030006E20|PX00063K22|AK037178|2011					AK037178	A030006E20Rik		ILMN_2553462	003830348	S	1916	TCATAGAGGCAAAGGGGAGCGGGGATGAGATAGGGGATTTGCAGAGGGGG										
Mus musculus	RefSeq	ILMN_196994	ILMN_196994	LOC381289	XM_355230.1	XM_355230.1			38073306	XM_355230.1	LOC381289		ILMN_1252324	001340747	S	13	GCAACCTGCGAACGTTCGTTACCAGATATCTACGCTGTAGAACTAGCAGG										
Mus musculus	RefSeq	ILMN_249840	ILMN_249840	RTN1	NM_001007596.1	NM_001007596.1		104001	56090140	NM_001007596.1	Rtn1	NP_001007597.1	ILMN_3040710	004810288	I	139	CAGGCCACTGCCGATTCCACCAAGATGGACTGTGTGTGGAGCAACTGGAA	12	-	73337523-73337572	12qC3	Mus musculus reticulon 1 (Rtn1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rtn1-c; Rtn1-a; 0710005K15Rik; 4930441F12Rik; Rtn1-b; R75279; Nsp; MGC40985	Rtn1-c; Rtn1-a; 0710005K15Rik; 4930441F12Rik; Rtn1-b; R75279; Nsp; MGC40985
Mus musculus	RefSeq	ILMN_249840	ILMN_249840	RTN1	NM_001007596.1	NM_001007596.1		104001	56090140	NM_001007596.1	Rtn1	NP_001007597.1	ILMN_3115490	002370687	A	1147	GCGCTGACACATAGTGGATCGCTTATCATGTCCTTGGGTTGCTGGATGGA	12	-	73313087-73313136	12qC3	Mus musculus reticulon 1 (Rtn1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rtn1-c; Rtn1-a; 0710005K15Rik; 4930441F12Rik; Rtn1-b; R75279; Nsp; MGC40985	Rtn1-c; Rtn1-a; 0710005K15Rik; 4930441F12Rik; Rtn1-b; R75279; Nsp; MGC40985
Mus musculus	RefSeq	ILMN_234029	ILMN_234029	NUAK1	NM_001004363.1	NM_001004363.1		77976	52138543	NM_001004363.1	Nuak1	NP_001004363.1	ILMN_2928720	004730349	S	4536	CCAATGGAGCCCTGTTATCCCTGCCAGTCAGTCCCCAGCCAAAGAAGGGA	10	-	83834496-83834545	10qC1	Mus musculus NUAK family, SNF1-like kinase, 1 (Nuak1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	B230104P22Rik; MGC90816; AW494241; AU014801	B230104P22Rik; MGC90816; AW494241; AU014801
Mus musculus	RefSeq	ILMN_196689	ILMN_234029	NUAK1	NM_001004363.1	NM_001004363.1		77976	52138543	NM_001004363.1	Nuak1	NP_001004363.1	ILMN_1227458	006860309	S	4849	CCTGGTGCTCTTTACCAAAGGAGCTCGCTGCAGGGTGAAATTCAGGCGTG	10	-	83834183-83834232	10qC1	Mus musculus NUAK family, SNF1-like kinase, 1 (Nuak1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	B230104P22Rik; MGC90816; AW494241; AU014801	B230104P22Rik; MGC90816; AW494241; AU014801
Mus musculus	MEEBO	ILMN_195988	ILMN_195988	LAIR1	scl31827.10_358				31340833	NM_178611	Lair1		ILMN_2520580	005080685	S	10	CTTATCTGTCAACTATTCTTATCTTATTCTTATGCAGCTTGTTTGTGTTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195988	ILMN_195988	LAIR1	scl31827.10_358				31340833	NM_178611	Lair1		ILMN_2621296	007040348	S	2787	CCTTCTTGTAGGCAGGTACATTGTAGATTCAAAGGTTTGTAATCAGGTTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211290	ILMN_211290	FOXA3	NM_008260.2	NM_008260.2		15377	118130865	NM_008260.2	Foxa3	NP_032286.1	ILMN_1228748	005290376	S	1968	CTGAGGTCAAGTTCTTGTCTGGGGCTTGGGAATACTGCCTGTGTTTGGCC	7	-	19598653-19598702	7qA3	Mus musculus forkhead box A3 (Foxa3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment [goid 9267] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; A cellular homeostatic process involved in the maintenance of an internal equilibrium of glucose within a cell or between a cell and its external environment [goid 1678] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Hnf-3g; Hnf3g; Tcf3g; Tcf-3g	Hnf-3g; Hnf3g; Tcf3g; Tcf-3g
Mus musculus	RefSeq	ILMN_221182	ILMN_314317	1110054P19RIK	XM_001479330.1	XM_001479330.1		68768	149275032	XM_001479330.1	1110054P19Rik	XP_001479380.1	ILMN_2732033	003450358	S	842	TTACTCCCACATTGATGTTTATGTCATATTTATATAAGTATTTTTATATT				11qD	PREDICTED: Mus musculus RIKEN cDNA 1110054P19 gene (1110054P19Rik), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_194145	ILMN_194145	2310033F14RIK	scl22971.1.1_74						2310033F14Rik		ILMN_1219840	003710136	S	1	CTGCCTTGGTTTCCTAGATGGTGTTGGTACAGGGCTCTCTGGCCTCTGGT										
Mus musculus	RefSeq	ILMN_219867	ILMN_219867	TAS2R136	NM_181276.1	NM_181276.1		353165	31044476	NM_181276.1	Tas2r136	NP_851793.1	ILMN_1250482	000060706	S	837	CCACCTGATTTGCCAGGTTATTGGAACCTTGTATCCTTCAAGACATTCTT	6	-	132727294-132727343	6qG1	Mus musculus taste receptor, type 2, member 136 (Tas2r136), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence NAS]	mt2r52; Tas2r36	mt2r52; Tas2r36
Mus musculus	RefSeq	ILMN_247978	ILMN_247978	SPAG8	NM_001007463.1	NM_001007463.1		433700	55925584	NM_001007463.1	Spag8	NP_001007464.1	ILMN_3160526	005960180	S	1134	CTGGTACGAGCAGCGCCTCCTGCCTCAACAAAGCCTCATGATTACCGCCA	4	-	43664664-43664681:43664800-43664831	4qB1	Mus musculus sperm associated antigen 8 (Spag8), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MH-SPAG8	MH-SPAG8
Mus musculus	RefSeq	ILMN_216292	ILMN_216292	RPP40	NM_145938.3	NM_145938.3		208366	141801791	NM_145938.3	Rpp40	NP_666050.2	ILMN_2669460	006550025	S	4155	ATAGGACTGCTTCCTCCACCCTCCAGCCACACTCTGGGTTCTTAGAGTAC	13	-	35985504-35985553	13qA3.3	Mus musculus ribonuclease P 40 subunit (human) (Rpp40), mRNA.	A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [evidence ISO]	Generation of the mature 5'-end of the tRNA, usually via an endonucleolytic cleavage by RNase P [goid 1682] [evidence ISO]	Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence ISO]	Rnasep1; MGC25944; D8Bwg1265e	Rnasep1; MGC25944; D8Bwg1265e
Mus musculus	RefSeq	ILMN_220254	ILMN_317383	LOC100047840	XM_001479407.1	XM_001479407.1		100047840	149253807	XM_001479407.1	LOC100047840	XP_001479457.1	ILMN_2725964	006060731	S	900	CATGACACCTTTCTTCATTTATCTCAGTATTTATTATTTTCAAAAGGAAG					PREDICTED: Mus musculus similar to stem cell adaptor protein STAP-1, transcript variant 1 (LOC100047840), mRNA.					
Mus musculus	MEEBO	ILMN_196032	ILMN_196032	LGR6	scl00329252.1_132				28482238	XM_283647	Lgr6		ILMN_2675471	006100722	S	784	CTACATAACAACCGCATCCAGCATGTGGGGACCCACAGCTTCGAGGGGCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_196032	ILMN_196032	LGR6	scl00329252.1_132				28482238	XM_283647	Lgr6		ILMN_2609504	000540730	S	3176	TCCAAGTCTTGCTTTGTCTTGGCCTTCAGCTTCACTTTCACCCTGGGCCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_219665	ILMN_219665	MRPL1	scl0094061.1_118	NM_053158.1			19424113	NM_053158.1	Mrpl1		ILMN_2711966	004570731	S	873	TCTGGGTCCGTTTGTGGTCCGTGCCTTCCTTCGTAGTTCAACCAGTGAAG						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211342	ILMN_211342	5830467E07RIK	scl00232566.1_2	XM_149818.1			20836733	XM_149818.1	5830467E07Rik		ILMN_2614843	006060112	S	14	CTGGGCTGTTATTTATTGGCCTCAAGGAAACACTGAATAGTAGCTCCCCA										
Mus musculus	MEEBO	ILMN_211342	ILMN_211342	5830467E07RIK	scl00232566.1_2	XM_149818.1			20836733	XM_149818.1	5830467E07Rik		ILMN_1217446	003460373	S	13	ACTGGGCTGTTATTTATTGGCCTCAAGGAAACACTGAATAGTAGCTCCCC										
Mus musculus	RefSeq	ILMN_224958	ILMN_224958	1190003M12RIK	NM_026860.1	NM_026860.1		68888	114326172	NM_026860.1	1190003M12Rik	NP_081136.1	ILMN_2856588	002060286	S	509	GCCCAATACGGAGTGCCAATCAAAGACCTGTGCAGAGCCGTCCCCACCTA	6	-	87334351-87334400	6qD1	Mus musculus RIKEN cDNA 1190003M12 gene (1190003M12Rik), mRNA.					
Mus musculus	Riken	ILMN_204032	ILMN_204032	A630099L06RIK	ri|A630099L06|PX00148P15|AK042521|3691					AK042521	A630099L06Rik		ILMN_1254672	003990431	S	3344	TCCTGTGGTGTAGCACAAGTCAGCCTGGCAATCTGGCGTCAGGGTATGCG										
Mus musculus	RefSeq	ILMN_199907	ILMN_199907	LOC384061	XM_357394.1	XM_357394.1			38078864	XM_357394.1	LOC384061		ILMN_1253310	000520575	S	316	TCCATCCAGGGACAGAGCCCAGCCAATGAGGTGACCATGAAGGAGATGGG										
Mus musculus	RefSeq	ILMN_224667	ILMN_224667	LOC381936	NM_001037248.1	NM_001037248.1		381936	85702275	NM_001037248.1	LOC381936	NP_001032325.1	ILMN_3033278	002030176	I	187	AGGAACTGGCGTTCAATGATGCTGAGCGATTAGACTTGGACTTCAGGAGC	7	-	22424757-22424806	7qA3	Mus musculus similar to Ser/Thr protein kinase PAR-1A (LOC381936), mRNA.					
Mus musculus	RefSeq	ILMN_224667	ILMN_224667	LOC381936	NM_001037248.1	NM_001037248.1		381936	85702275	NM_001037248.1	LOC381936	NP_001032325.1	ILMN_3106932	006660709	A	1027	CTCAATGTCATCATTGAACTGCTGATGATCAATCCCAGCAGGAGGCCCAC	7	-	22422875-22422924	7qA3	Mus musculus similar to Ser/Thr protein kinase PAR-1A (LOC381936), mRNA.					
Mus musculus	RefSeq	ILMN_209076	ILMN_321410	LOC100045625	XM_001474631.1	XM_001474631.1		100045625	149267037	XM_001474631.1	LOC100045625	XP_001474681.1	ILMN_2592295	004490398	S	2488	GAGAAACTAATGAAGTTTAAATCGAATGATTCCTGCTGTGAGATTGGCCA					PREDICTED: Mus musculus similar to MUC19 (LOC100045625), mRNA.					
Mus musculus	RefSeq	ILMN_187996	ILMN_236099	ZFP1	NM_001037665.2	NM_001037665.2		22640	109659837	NM_001037665.2	Zfp1	NP_001032754.1	ILMN_1214224	005910131	S	1475	CAGTGAAGGGGGAAGCCCTCATGAAGATGCTGAAGGAACTTGGGAAATTC	8	+	114194512-114194561	8qE1	Mus musculus zinc finger protein 1 (Zfp1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mkr-1; Fnp-1; Zfp-1	mkr-1; Fnp-1; Zfp-1
Mus musculus	RefSeq	ILMN_214910	ILMN_214910	PRKCD	NM_011103.2	NM_011103.2		18753	118130235	NM_011103.2	Prkcd	NP_035233.1	ILMN_1245750	003710601	S	2182	GCTGGGCTCACAGTACTTCCTCTGTGAACTGTTTGTGAATTTGCCTTCCC	14	-	31408859-31408908	14qB	Mus musculus protein kinase C, delta (Prkcd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The appearance of interleukin-10 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 32613] [evidence IMP]; The appearance of interleukin-12 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 32615] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PKC[d]; AI385711; Pkcd; D14Ertd420e; PKCdelta	PKC[d]; AI385711; Pkcd; D14Ertd420e; PKCdelta
Mus musculus	RefSeq	ILMN_241653	ILMN_241653	CTSH	NM_007801.1	NM_007801.1		13036	7106278	NM_007801.1	Ctsh	NP_031827.1	ILMN_2872058	003870047	S	1076	GCAGACCAAGGGAGGAACTGGTCCTTCGATGAGAATGCCACCCTGGAGAA	9	+	89970628-89970677	9qE3.1	Mus musculus cathepsin H (Ctsh), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	AL022844	AL022844
Mus musculus	RefSeq	ILMN_210437	ILMN_210437	EMP3	NM_010129.1	NM_010129.1		13732	6753749	NM_010129.1	Emp3	NP_034259.1	ILMN_2984744	003520546	S	625	GCCTGGGTGGCTTTTCCACTCGCTCTGGTCAGCGGCATTGTCTACATCCA	7	-	53173454-53173503	7qB4	Mus musculus epithelial membrane protein 3 (Emp3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]		Ymp; MI-35; H-4; HNMP-1; H4	Ymp; MI-35; H-4; HNMP-1; H4
Mus musculus	RefSeq	ILMN_210437	ILMN_210437	EMP3	NM_010129.1	NM_010129.1		13732	6753749	NM_010129.1	Emp3	NP_034259.1	ILMN_1248028	001070224	S	202	ATGTCACTCCTCCTGTTGGTGGTCTCTGCCCTCCACATCCTCATTCTTGT	7	-	53175686-53175735	7qB4	Mus musculus epithelial membrane protein 3 (Emp3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]		Ymp; MI-35; H-4; HNMP-1; H4	Ymp; MI-35; H-4; HNMP-1; H4
Mus musculus	RefSeq	ILMN_184418	ILMN_249548	PSG16	NM_007676.3	NM_007676.3		26436	46849784	NM_007676.3	Psg16	NP_031702.2	ILMN_2611851	002900546	S	1503	ATGCCAACTACGTATAAATCCTGTCAGGAAAGAGGATGGTGGAGAGTATC	7	+	17683530-17683579	7qA2	Mus musculus pregnancy specific glycoprotein 16 (Psg16), mRNA.				Cea11; bCEA	Cea11; bCEA
Mus musculus	RefSeq	ILMN_249548	ILMN_249548	PSG16	NM_007676.3	NM_007676.3		26436	46849784	NM_007676.3	Psg16	NP_031702.2	ILMN_2962113	004610398	S	4162	GCAACTGCTATAGACTATGAGTGTAGGGAGCCATTCCGGACTTCCTGGTC	7	+	17718530-17718579	7qA2	Mus musculus pregnancy specific glycoprotein 16 (Psg16), mRNA.				Cea11; bCEA	Cea11; bCEA
Mus musculus	RefSeq	ILMN_216578	ILMN_249799	4930432K21RIK	NM_029045.1	NM_029045.1		74666	58037384	NM_029045.1	4930432K21Rik	NP_083321.1	ILMN_2672745	004070086	S	2147	CTCCCATGCAACAGGGTTGCCTGAGCTTTAAGGAAGTCACCTGACAGAGC	8	+	86696270-86696319	8qC3	Mus musculus RIKEN cDNA 4930432K21 gene (4930432K21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_184664	ILMN_184664	VPS16	NM_030559.2	NM_030559.2		80743	46852152	NM_030559.2	Vps16	NP_085036.2	ILMN_1230082	002760619	S	2301	ACAGCATAACAAACATGAGGCCAAGAAGTATGCTTCCCGTGTGGGCCCTG	2	+	130269055-130269104	2qF1	Mus musculus vacuolar protein sorting 16 (yeast) (Vps16), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	MGC7352; 1810074M16Rik	MGC7352; 1810074M16Rik
Mus musculus	RefSeq	ILMN_184664	ILMN_184664	VPS16	NM_030559.2	NM_030559.2		80743	46852152	NM_030559.2	Vps16	NP_085036.2	ILMN_2491792	006980243	S	15	AGCTAGGGGGCAGGTTCCTAGACCTATCTCTACACGACACTGTCACCACT	2	+	130250139-130250183:130263358-130263362	2qF1	Mus musculus vacuolar protein sorting 16 (yeast) (Vps16), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	MGC7352; 1810074M16Rik	MGC7352; 1810074M16Rik
Mus musculus	RefSeq	ILMN_184664	ILMN_184664	VPS16	NM_030559.2	NM_030559.2		80743	46852152	NM_030559.2	Vps16	NP_085036.2	ILMN_2420505	003120491	S	1275	GGACCTTCGAGTGCTCAATGCTATTAGAGACTACCACATTGGGATCCCTC	2	+	130266253-130266302	2qF1	Mus musculus vacuolar protein sorting 16 (yeast) (Vps16), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	MGC7352; 1810074M16Rik	MGC7352; 1810074M16Rik
Mus musculus	RefSeq	ILMN_184664	ILMN_184664	VPS16	NM_030559.2	NM_030559.2		80743	46852152	NM_030559.2	Vps16	NP_085036.2	ILMN_2893683	006770097	S	2198	TGGCTGCCCTGGCAGATTTGGAAGATTGGGAGGAGCTGGAGAAGTTTTCC	2	+	130268340-130268389	2qF1	Mus musculus vacuolar protein sorting 16 (yeast) (Vps16), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	MGC7352; 1810074M16Rik	MGC7352; 1810074M16Rik
Mus musculus	MEEBO	ILMN_220746	ILMN_220746	B230359F08RIK	scl46319.2.360_23	NM_177626.2			31341361	NM_177626.2	B230359F08Rik		ILMN_1229182	001820735	S	1163	GCCTACATGTGTGGCTGTACCTACCATTGCAGAAGGAAAAGGAAAGTGTC										
Mus musculus	RefSeq	ILMN_201643	ILMN_249211	5330426P16RIK	XM_916412.3	XM_916412.3		68190	149267899	XM_916412.3	5330426P16Rik	XP_921505.3	ILMN_2543433	002600168	S	584	TGTAGAGACAAAAGGACAAAGATGGAACCCACCAAGGATGCTCCCGGCTG				16qB5	PREDICTED: Mus musculus RIKEN cDNA 5330426P16 gene (5330426P16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_185462	ILMN_249211	5330426P16RIK	XM_916412.3	XM_916412.3		68190	149267899	XM_916412.3	5330426P16Rik	XP_921505.3	ILMN_2458376	006960010	S	817	GGGGTTGAACCTGAACACGTGAAAGAGAATCCAAGGTAATTGGGGAAGCA				16qB5	PREDICTED: Mus musculus RIKEN cDNA 5330426P16 gene (5330426P16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209866	ILMN_209866	G430022H21RIK	NM_201638.1	NM_201638.1		210529	42517135	NM_201638.1	G430022H21Rik	NP_964000.1	ILMN_2818206	007050148	S	2366	GCAGTGTCCTTTGATTAGAACTATGTGGTGCAGAAGTCGCCGCAGGGCTG	3	-	123071380-123071429	3qG1	Mus musculus RIKEN cDNA G430022H21 gene (G430022H21Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	mKIAA1627	mKIAA1627
Mus musculus	RefSeq	ILMN_209866	ILMN_209866	G430022H21RIK	NM_201638.1	NM_201638.1		210529	42517135	NM_201638.1	G430022H21Rik	NP_964000.1	ILMN_1248621	005810209	S	2515	ATATTGTTCTGGGTAACTCCTTTTTTATTTTGCTATAACTTTTCTAATAA	3	-	123071231-123071280	3qG1	Mus musculus RIKEN cDNA G430022H21 gene (G430022H21Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	mKIAA1627	mKIAA1627
Mus musculus	RefSeq	ILMN_185152	ILMN_236858	NMD3	NM_133787.2	NM_133787.2		97112	118130861	NM_133787.2	Nmd3	NP_598548.1	ILMN_1254684	000460500	S	1475	CCTGTGGAAAGTGACACAGATGATGAAGGAGCACCTCGAATTAGTCTGGC	3	+	69552705-69552754	3qE1	Mus musculus NMD3 homolog (S. cerevisiae) (Nmd3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a ribosomal large subunit from the nucleus into the cytoplasm [goid 55] [evidence ISO]	Interacting selectively with any part of the larger ribosomal subunit [goid 43023] [evidence ISO]	C87860	C87860
Mus musculus	RefSeq	ILMN_185597	ILMN_258208	TCFAP2A	NM_011547.2	NM_011547.2		21418	31981461	NM_011547.2	Tcfap2a	NP_035677.2	ILMN_2726449	005890735	S	322	GGGGCAAATCCGATCACGCCGATCCATGAAAATGCTTTGGAAACTGACGG	13	-	40829065-40829083:40829084-40829114	13qA3.3	Mus musculus transcription factor AP-2, alpha (Tcfap2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	The joining together of the neural folds of the rostral opening of the neural tube. The anterior neuropore appears before the process of neural tube closure is complete [goid 21506] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AP-2; Ap2; Ap2tf	AP-2; Ap2; Ap2tf
Mus musculus	RefSeq	ILMN_192685	ILMN_258208	TCFAP2A	NM_011547.2	NM_011547.2		21418	31981461	NM_011547.2	Tcfap2a	NP_035677.2	ILMN_1222212	004180440	S	371	CCGTCAGTTTCCAAAGCATTTTCATGGATCGGCGTGATCGGATTTGCCCC	13	-	40824123-40824145:40829039-40829065	13qA3.3	Mus musculus transcription factor AP-2, alpha (Tcfap2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	The joining together of the neural folds of the rostral opening of the neural tube. The anterior neuropore appears before the process of neural tube closure is complete [goid 21506] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AP-2; Ap2; Ap2tf	AP-2; Ap2; Ap2tf
Mus musculus	RefSeq	ILMN_185597	ILMN_258208	TCFAP2A	NM_011547.2	NM_011547.2		21418	31981461	NM_011547.2	Tcfap2a	NP_035677.2	ILMN_2764846	004900747	S	1900	CCCCTTTACCCTCGTGTGGAGCCTAAGAGAACAGAACAGGTCGTGAAGCC	13	-	40812201-40812250	13qA3.3	Mus musculus transcription factor AP-2, alpha (Tcfap2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	The joining together of the neural folds of the rostral opening of the neural tube. The anterior neuropore appears before the process of neural tube closure is complete [goid 21506] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AP-2; Ap2; Ap2tf	AP-2; Ap2; Ap2tf
Mus musculus	RefSeq	ILMN_258208	ILMN_258208	TCFAP2A	NM_011547.2	NM_011547.2		21418	31981461	NM_011547.2	Tcfap2a	NP_035677.2	ILMN_2913031	006650376	S	1857	CCTACTCAGCGCCTTGCCTCAACTTCCCCATCAGCACCAACACCCCCTTT	13	-	40812244-40812293	13qA3.3	Mus musculus transcription factor AP-2, alpha (Tcfap2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	The joining together of the neural folds of the rostral opening of the neural tube. The anterior neuropore appears before the process of neural tube closure is complete [goid 21506] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AP-2; Ap2; Ap2tf	AP-2; Ap2; Ap2tf
Mus musculus	RefSeq	ILMN_223993	ILMN_227016	TUBGCP4	NM_153387.2	NM_153387.2		51885	118130151	NM_153387.2	Tubgcp4	NP_700436.1	ILMN_1257622	005130100	S	2472	GTAAACAGTGGGTTGGCTCATGTAAGAACGGAATCACGCTCCTGAACAGG	2	+	121022763-121022812	2qE5	Mus musculus tubulin, gamma complex associated protein 4 (Tubgcp4), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]		MGC28085; 76p; 4932441P04Rik	MGC28085; 76p; 4932441P04Rik
Mus musculus	MEEBO	ILMN_192165	ILMN_192165	B130005I07RIK	scl36648.18.1_155						B130005I07Rik		ILMN_2485594	006960273	S	20	TGAAGACCAGGCCCCTCAACACAGCCAGCATGTTTTGCTGAGCGATGACA										
Mus musculus	RefSeq	ILMN_224146	ILMN_249043	ACADVL	NM_017366.2	NM_017366.2		11370	133892573	NM_017366.2	Acadvl	NP_059062.1	ILMN_2775586	002260289	S	2074	GCAAGGTCATGTGCCTTCTCTGATGCCAAAACCCTTTATGGGGGTGATGG	11	-	69825953-69826002	11qB3	Mus musculus acyl-Coenzyme A dehydrogenase, very long chain (Acadvl), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	vlcad	vlcad
Mus musculus	RefSeq	ILMN_196079	ILMN_212212	ATP10B	NM_176999.3	NM_176999.3		319767	125628643	NM_176999.3	Atp10b	NP_795973.2	ILMN_2521450	004260689	S	6573	GCACTCGGATGCTGCTCTTTTCTTGCTTACCAACCAACTCCATTTGCTTG	11	+	43075452-43075501	11qA5	Mus musculus ATPase, class V, type 10B (Atp10b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	9030605H24Rik; 5930426O13Rik	9030605H24Rik; 5930426O13Rik
Mus musculus	Riken	ILMN_206504	ILMN_206504	D630035D13RIK	ri|D630035D13|PX00197G22|AK085493|1825					AK085493	D630035D13Rik		ILMN_2580585	006510639	S	1760	GATCTACCACCCTCTTCTGGCCTCTGAAGCCACAGCATGCACATTCAGGC										
Mus musculus	MEEBO	ILMN_211891	ILMN_211891	SSBP2	scl0003626.1_153	NM_024272.1			21728381	NM_024272.1	Ssbp2		ILMN_1246193	001710403	S	474	GGATGTTTGATGTTTGCTGAAACTTAGCGTATAGAGTGGGAGTAAGTCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_188979	ILMN_188979	VSX1	NM_054068.2	NM_054068.2		114889	40254121	NM_054068.2	Vsx1	NP_473409.1	ILMN_2511563	004480398	S	926	GCCACTGCATTCCACTGCCGGACAGCGTGCTCAACTCTGCAGATAGCCTG	2	-	150510174-150510223	2qG3	Mus musculus visual system homeobox 1 homolog (zebrafish) (Vsx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina [goid 60040] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina [goid 60040] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	CHX10-like	CHX10-like
Mus musculus	RefSeq	ILMN_188979	ILMN_188979	VSX1	NM_054068.2	NM_054068.2		114889	40254121	NM_054068.2	Vsx1	NP_473409.1	ILMN_2873623	005900709	S	3208	TCCCTCTGCCCCAACCTCCACAGTAGCTGGACCACAGTTTTGTGCCACTG	2	-	150506748-150506797	2qG3	Mus musculus visual system homeobox 1 homolog (zebrafish) (Vsx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina [goid 60040] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina [goid 60040] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	CHX10-like	CHX10-like
Mus musculus	RefSeq	ILMN_211985	ILMN_320846	LOC100048461	XM_001480292.1	XM_001480292.1		100048461	149255807	XM_001480292.1	LOC100048461	XP_001480342.1	ILMN_1239843	007160671	S	542	GCCTTTCCCGCAATCAGAGTGAAGGGCCATGGTTCTGGGAGGATGGATCA					PREDICTED: Mus musculus similar to dendritic cell-associated C-type lectin-1; DECTIN-1 (LOC100048461), mRNA.					
Mus musculus	RefSeq	ILMN_221384	ILMN_221384	CENPM	NM_025639.4	NM_025639.4		66570	122939135	NM_025639.4	Cenpm	NP_079915.1	ILMN_2734882	007040475	S	407	CCAGAACACAGTTATAAAACTGGCCCACACCTACCGAAGCCCGCTGCTCC	15	-	82069736-82069785	15qE1	Mus musculus centromere protein M (Cenpm), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]			2610019I03Rik; AI853711; Pane1	2610019I03Rik; AI853711; Pane1
Mus musculus	RefSeq	ILMN_208968	ILMN_208968	PCDHA6	NM_007767.3	NM_007767.3		12937	148747517	NM_007767.3	Pcdha6	NP_031793.2	ILMN_2591294	000520347	S	2028	AAAAGCCTCTTCGCGAGCGCAAGGTGCCACTGGCCAGGAAGTTTCGTTAG				18qB2-qB3	Mus musculus protocadherin alpha 6 (Pcdha6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CNR; Cnr2; Crnr2	CNR; Cnr2; Crnr2
Mus musculus	RefSeq	ILMN_219119	ILMN_253972	UGT1A9	NM_201644.2	NM_201644.2		394434	145864462	NM_201644.2	Ugt1a9	NP_964006.2	ILMN_2754718	005560347	S	694	CATGCATTTTGCTCCTACTTTTTAAGAACTGCTGTTGAAGTTGCATCTGA				1qD	Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A9 (Ugt1a9), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	Ugt1a12; mUGTBr/P; A12	Ugt1a12; mUGTBr/P; A12
Mus musculus	RefSeq	ILMN_214262	ILMN_214262	TIMM23	NM_016897.1	NM_016897.1		53600	12025535	NM_016897.1	Timm23	NP_058593.1	ILMN_2646105	004010022	S	1089	GCCCTGTTTTCCAAATAAAGGGTGAAAACAGAACCAAAGTCATAATTCCA	14	-	32993355-32993404	14qB	Mus musculus translocase of inner mitochondrial membrane 23 homolog (yeast) (Timm23), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence ISO]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	MGC46821; Tim23	MGC46821; Tim23
Mus musculus	RefSeq	ILMN_224993	ILMN_224993	BEST2	NM_145388.1	NM_145388.1		212989	21703775	NM_145388.1	Best2	NP_663363.1	ILMN_2943523	004850484	S	1603	CCCCTACGGACACCTACCTAATCCTGCACTGGACATACTGGCGACCACCA	8	-	87897598-87897647	8qC3	Mus musculus bestrophin 2 (Best2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IDA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 16912113] [evidence IEP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IDA]	Vmd2l1	Vmd2l1
Mus musculus	RefSeq	ILMN_216196	ILMN_216196	SIP1	NM_025656.3	NM_025656.3		66603	153792165	NM_025656.3	Sip1	NP_079932.2	ILMN_1255390	006590292	S	957	GTGAAGGGCTTCATCTTAATCTGCAGCTCAAGCTGATATTCAAAATATAG				12qC1	Mus musculus survivor of motor neuron protein interacting protein 1 (Sip1), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IEA]		Gemin2; 1700012N19Rik	Gemin2; 1700012N19Rik
Mus musculus	Riken	ILMN_206522	ILMN_206522	D830031G23RIK	ri|D830031G23|PX00199N23|AK085933|533					AK085933	D830031G23Rik		ILMN_1244266	000160364	S	423	CTGTGCCAGTAGGAATCCCAGGGCTTAGACTCCATGCATAGTCGGCAAGT										
Mus musculus	RefSeq	ILMN_240904	ILMN_240904	PLAC1L	NM_001037634.1	NM_001037634.1		225922	85701585	NM_001037634.1	Plac1l	NP_001032723.1	ILMN_2845542	001240242	S	505	GCTCACCAAGCTGCTTCCTCCCAGAATAAGAGATAGGGACAGTGCTGGCA	19	-	11714447-11714462:11714463-11714496	19qA	Mus musculus placenta-specific 1-like (Plac1l), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Gm99; MGC117750; Tmem122	Gm99; MGC117750; Tmem122
Mus musculus	RefSeq	ILMN_209454	ILMN_317313	2010109K11RIK	XR_035455.1	XR_035455.1		72123	149262914	XR_035455.1	2010109K11Rik		ILMN_2595921	001450201	S	1421	GTTTCAAGCTTATGACTGTTAATGTAAGGATTTGTATGGCTTTGAATTTC	12	+	33065072-33065121	12qA3	PREDICTED: Mus musculus RIKEN cDNA 2010109K11 gene (2010109K11Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_214555	ILMN_312579	LOC666676	XR_030655.1	XR_030655.1		666676	149233949	XR_030655.1	LOC666676		ILMN_3160792	005290324	S	1440	CAGACCCACATCCTGGAGCACCCCCATCTCCATGTGTGAAGTAGCTTCCT				1qC1.1	PREDICTED: Mus musculus similar to ADP-ribosylation factor (LOC666676), misc RNA.					
Mus musculus	Riken	ILMN_203552	ILMN_203552	NFIB	ri|9330170D16|PX00105P24|AK034261|3309					AK034261	Nfib		ILMN_1257943	001990452	S	2670	CTCCACAGTGCATCTGGTAGAAGGATGACACAGAGAGAACGTTTCAACCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197982	ILMN_243768	LOC271374	XR_003948.1	XR_003948.1		271374	94401279	XR_003948.1	LOC271374		ILMN_1245141	007160538	S	675	AGTAGGTGGTGGACAGTGCATGTGAGGTGATCAAGCTGAGAGGTTACTAC				16qB4	PREDICTED: Mus musculus similar to L-lactate dehydrogenase A chain (LDH-A) (LDH muscle subunit) (LDH-M) (LOC271374), mRNA.					
Mus musculus	Riken	ILMN_206185	ILMN_206185	6430402F21RIK	ri|6430402F21|PX00315E12|AK078174|2848					AK078174	6430402F21Rik		ILMN_2578216	005490280	S	2475	ATGTGCAGGCTGAGGAGCAGGCAGATGTGCAGGCAGAGGAGCAGGCAGAT										
Mus musculus	MEEBO	ILMN_191360	ILMN_191360	MYO1A	scl38313.10.1_10						Myo1a		ILMN_2478429	001400753	S	9	GAGTAATGCCATGGAGGTGACTGTGCGGTGAGGAGGTTGGGGCCTCCTGG						A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IDA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell [goid 30033] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216181	ILMN_216181	2700081L22RIK	scl24330.2.1_133	XM_358608.1			38078315	XM_358608.1	2700081L22Rik		ILMN_2668159	001030148	S	512	TATTCCTAATGTATTGATGTTTACATCTTCATCTATCTTCTTATAACCAC										
Mus musculus	RefSeq	ILMN_192698	ILMN_192698	YWHAB	NM_018753.5	NM_018753.5		54401	146134365	NM_018753.5	Ywhab	NP_061223.2	ILMN_2490479	002140687	S	2216	AACACAGGGAAGTTGCATGGACACTACAGTCGAGACAACCAAGAACAGCC				2qH3	Mus musculus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide (Ywhab), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]	14-3-3 beta; 1300003C17Rik	14-3-3 beta; 1300003C17Rik
Mus musculus	MEEBO	ILMN_188244	ILMN_188244	SNX13	scl43285.27_594				51828995	XM_126867	Snx13		ILMN_1260440	006100292	S	19	GCGTCGATCGTGCCTACCGCTCTATCAATGCTCTCCTCTAACCAAGGGGA							The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	Riken	ILMN_201887	ILMN_201887	VCAM1	ri|4931419I02|PX00016L17|AK016465|1370					AK016465	Vcam1		ILMN_1232768	004830475	S	1020	TGGGAGAATGAAGTCTCAGATTACTAATGGCCATCAATTGACTGTACACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185113	ILMN_225883	WTIP	NM_207212.2	NM_207212.2		101543	118130987	NM_207212.2	Wtip	NP_997095.1	ILMN_2424268	001450717	S	1812	GGCTCCCTTACAGACCCTGCCAGCGAACATCTGTGCACACTATATCAGGC	7	-	34894662-34894711	7qB1	Mus musculus WT1-interacting protein (Wtip), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217571	ILMN_217571	GPSM3	NM_134116.4	NM_134116.4		106512	153792371	NM_134116.4	Gpsm3	NP_598877.1	ILMN_1222256	003850221	S	310	TTCTGGACCTAGTGGCCGAAGCCCAGTCCCGCCGCCTAGAGGAACAGAGG				17qB1	Mus musculus G-protein signalling modulator 3 (AGS3-like, C. elegans) (Gpsm3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AGS4; AA960287	AGS4; AA960287
Mus musculus	MEEBO	ILMN_186565	ILMN_186565	2310009A05RIK	scl066364.3_40						2310009A05Rik		ILMN_2436608	007330113	S	20	CCTGCCGCTGCAATGCTCGGGAGATTGCCACTTCCACAACTGCTTTTTGC										
Mus musculus	RefSeq	ILMN_197362	ILMN_313012	LOC100045853	XM_001475031.1	XM_001475031.1		100045853	149250367	XM_001475031.1	LOC100045853	XP_001475081.1	ILMN_1230948	005220270	S	297	TGCCATTGCCTTCGCGCACTTCGAGGGCTGGACCTTCTTCCACGCCTACT					PREDICTED: Mus musculus similar to potassium channel, subfamily K, member 15 (LOC100045853), mRNA.					
Mus musculus	RefSeq	ILMN_221838	ILMN_221838	USP44	NM_183199.2	NM_183199.2		327799	142344982	NM_183199.2	Usp44	NP_899022.1	ILMN_2741066	000060445	S	2564	CTGCCTCCAGTCGAAAGCCCATTTTCCCTTCACACAGCTTTCCTTTGTAT	10	+	93310901-93310950	10qC2	Mus musculus ubiquitin specific peptidase 44 (Usp44), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	E430004F17Rik	E430004F17Rik
Mus musculus	MEEBO	ILMN_224183	ILMN_224183	2210010B09RIK	scl37245.7_152				27370413	NM_172919	2210010B09Rik		ILMN_2776139	001710482	S	2030	GGGACTTACACTACTAAGAAGTCAAGGAATGTGCAACAGCCCCCAACTGT								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217233	ILMN_217233	AGTR2	NM_007429.3	NM_007429.3		11609	145301599	NM_007429.3	Agtr2	NP_031455.1	ILMN_2680635	004760133	S	3043	CTCCTGGGGGTTCAAATGACAAACTCGGTGTCAACCAAGCAAGCTGTCAG				XqA2	Mus musculus angiotensin II receptor, type 2 (Agtr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The process by which an angiotensin-mediated signaling system present in the brain regulates the force with which blood passes through the circulatory system [goid 2035] [evidence IDA]; The process that increases the size of a blood vessel via the renin-angiotensin system [goid 2033] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with bradykinin to initiate a change in cell activity [goid 4947] [evidence IEA];  [goid 4945] [evidence IDA];  [goid 4945] [evidence IPI]	AW107640; AI316812	AW107640; AI316812
Mus musculus	RefSeq	ILMN_219488	ILMN_219488	FSIP1	NM_027759.1	NM_027759.1		71313	21313243	NM_027759.1	Fsip1	NP_082035.1	ILMN_2885394	005860408	S	1177	GGAACTCTCTGTTGACTCTCCCACCATCTTCAGCCTTGAAAGTCAGAGCC	2	-	117924357-117924406	2qE5	Mus musculus fibrous sheath-interacting protein 1 (Fsip1), mRNA.	A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IC ]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700012M13Rik; 4933432K11Rik	1700012M13Rik; 4933432K11Rik
Mus musculus	MEEBO	ILMN_185245	ILMN_185245	BC042423	scl54289.1.1_18						BC042423		ILMN_1232925	000540358	S	4	GGTGGCAGCAATCCCCCTGCTTTTGTGATGGCCTGCCTAATGGAGTCAGG										
Mus musculus	RefSeq	ILMN_211695	ILMN_252521	OLFR799	NM_146927.1	NM_146927.1		258929	22203802	NM_146927.1	Olfr799	NP_667138.1	ILMN_1257470	003610167	S	9	CCGAACAGTAACAACTTTCATTTTGCTGGGTCTGACAGATGACATTAGGC	10	+	129084194-129084243	10qD3	Mus musculus olfactory receptor 799 (Olfr799), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR114-2	MOR114-2
Mus musculus	RefSeq	ILMN_252521	ILMN_252521	OLFR799	NM_146927.1	NM_146927.1		258929	22203802	NM_146927.1	Olfr799	NP_667138.1	ILMN_3001636	000050035	S	456	CGTTCTCCCACCAATTAGCCTAGGTTTGGGCCTGGAATTCTGTGACTCAG	10	+	129084641-129084690	10qD3	Mus musculus olfactory receptor 799 (Olfr799), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR114-2	MOR114-2
Mus musculus	RefSeq	ILMN_184348	ILMN_318806	ULK4	XM_001481114.1	XM_001481114.1		209012	149260413	XM_001481114.1	Ulk4	XP_001481164.1	ILMN_1250420	006060707	S	2811	AGAAAGACCTCCCCAGGCAAGGAGCAGCAGAGTGGGAATGAGTACCTGGC	9	-	121069443-121069492	9qF4	PREDICTED: Mus musculus unc-51-like kinase 4 (C. elegans) (Ulk4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_202288	ILMN_318806	ULK4	XM_001481114.1	XM_001481114.1		209012	149260413	XM_001481114.1	Ulk4	XP_001481164.1	ILMN_1257963	003450593	S	2759	GCTGCTGCTGAGCTGCCAAGCCAGGCTGGTGATGTACATCGAGAGAGACA	9	-	121069495-121069521:121077302-121077324	9qF4	PREDICTED: Mus musculus unc-51-like kinase 4 (C. elegans) (Ulk4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215616	ILMN_215616	TCF7	NM_009331.2	NM_009331.2		21414	31981969	NM_009331.2	Tcf7	NP_033357.1	ILMN_1242308	003780471	S	2082	TCCTTGCCACATTCTAGAAACTCTTTTTGAGCCAAACTTAACCCTGAGCC	11	-	52096133-52096182	11qB1.3	Mus musculus transcription factor 7, T-cell specific (Tcf7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 30538] [evidence IGI]; The process by which the anatomical structures of the hindgut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48619] [evidence IGI]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	TCF-1; AI465550; Tcf1	TCF-1; AI465550; Tcf1
Mus musculus	RefSeq	ILMN_196790	ILMN_213660	LGI4	NM_144556.2	NM_144556.2		243914	31981705	NM_144556.2	Lgi4	NP_653139.2	ILMN_2525815	006060601	S	327	CTCCTCTTCACATCCAATACCTTCTCTGTAATTGAGGGTGATGCCTTCAT	7	+	31845640-31845641:31846097-31846144	7qB1	Mus musculus leucine-rich repeat LGI family, member 4 (Lgi4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Lgil3; clp; MGC107385	Lgil3; clp; MGC107385
Mus musculus	RefSeq	ILMN_213660	ILMN_213660	LGI4	NM_144556.2	NM_144556.2		243914	31981705	NM_144556.2	Lgi4	NP_653139.2	ILMN_2639386	002450554	S	2989	TCCCTGCCGCCCGCAGCCTCACTCCAAGCTCCACACAGAGTCTCTGGCAC	7	+	31855499-31855548	7qB1	Mus musculus leucine-rich repeat LGI family, member 4 (Lgi4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Lgil3; clp; MGC107385	Lgil3; clp; MGC107385
Mus musculus	MEEBO	ILMN_214998	ILMN_214998	2610303G11RIK	scl35470.2.1_225				51765063	XM_486250	2610303G11Rik		ILMN_1220554	000770075	S	623	GGAGAGCTGAACAGCATGGCAGTGATGTTCTATAAAGGCGCTGCTATGAC										
Mus musculus	RefSeq	ILMN_215479	ILMN_319331	1700027J07RIK	XM_001477707.1	XM_001477707.1		69443	149260745	XM_001477707.1	1700027J07Rik	XP_001477757.1	ILMN_2660038	004810491	S	991	TAAAGAAAAAACTGCTTCCCTCCAGGTTCTGTGCCTTAGGCTTGCCATCA	10	+	43485573-43485622	10qB2	PREDICTED: Mus musculus RIKEN cDNA 1700027J07 gene (1700027J07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_248234	ILMN_248234	OLFR985	NM_146855.1	NM_146855.1		258854	22129158	NM_146855.1	Olfr985	NP_667066.1	ILMN_3009110	002630121	S	415	CGGGTCTGTTCTCTGCTGGTGGCTGCTGTCTTTTCAGTGGGCTTTACTGA	9	-	39935080-39935129	9qA5.1	Mus musculus olfactory receptor 985 (Olfr985), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR171-4	MOR171-4
Mus musculus	RefSeq	ILMN_212814	ILMN_257920	PAPPA	NM_021362.1	NM_021362.1		18491	59676576	NM_021362.1	Pappa	NP_067337.1	ILMN_2630646	005360736	S	5355	CCCAACCGGTCTGCCTTTAATTTCACCCAGGAAGGACCAACTGTGGGGCA	4	+	65012871-65012920	4qC1	Mus musculus pregnancy-associated plasma protein A (Pappa), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]	8430414N03Rik; PAG1; IGFBP-4ase; PAPP-A	8430414N03Rik; PAG1; IGFBP-4ase; PAPP-A
Mus musculus	RefSeq	ILMN_217379	ILMN_217379	ICA1	NM_010492.3	NM_010492.3		15893	145386532	NM_010492.3	Ica1	NP_034622.3	ILMN_1245768	005490142	S	1949	CCCTCGGGCCACTCCGCGGCACCTCATCCAGGGCTTGCAGAAGTCTAATA				6qA1	Mus musculus islet cell autoantigen 1 (Ica1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence NAS]		ICA69; 69kDa	ICA69; 69kDa
Mus musculus	Riken	ILMN_206331	ILMN_206331	PDHB	ri|D330010A17|PX00191O17|AK084507|1839					AK084507	Pdhb		ILMN_1247561	004260020	S	1624	GTGTGTTGTGGTGTTTGCCTTTACTCCCAGCACTCAAAAGTCAGGCAGGG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2 [goid 4739] [evidence IEA]		
Mus musculus	RefSeq	ILMN_249094	ILMN_249094	DCUN1D3	NM_173408.1	NM_173408.1		233805	27734155	NM_173408.1	Dcun1d3	NP_775584.1	ILMN_2901402	001070438	S	2394	GGCTCGGTTGGGGTAACGTGGTGACTGTTTAGGTTTACATGACCCTCTTC	7	-	119647450-119647499	7qF2	Mus musculus DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) (Dcun1d3), mRNA.				MGC40975; BC030335	MGC40975; BC030335
Mus musculus	RefSeq	ILMN_210366	ILMN_210366	LMOD1	NM_053106.2	NM_053106.2		93689	134948540	NM_053106.2	Lmod1	NP_444336.2	ILMN_2604885	002470458	S	3820	GTAGGGCTGAGGTCTTAACTCCTCTCTGCTGCTGAAAAAACGGACCAGTG	1	+	137264520-137264569	1qE4	Mus musculus leiomodin 1 (smooth muscle) (Lmod1), mRNA.				9530015K06Rik; SM-Lmod	9530015K06Rik; SM-Lmod
Mus musculus	RefSeq	ILMN_199523	ILMN_199523	LOC382669	XM_356619.1	XM_356619.1			38073962	XM_356619.1	LOC382669		ILMN_1235999	004570100	S	340	ACTGGGAACCGGGCACAGAACAAGTTGGCTCCTCCAATGTATTCCTACGT										
Mus musculus	RefSeq	ILMN_189898	ILMN_260757	FDPS	NM_134469.3	NM_134469.3		110196	118129959	NM_134469.3	Fdps	NP_608219.1	ILMN_1225730	005290671	S	911	TGGCTGGTGGTTCAGTGTCTGCTACGAGCCTCTCCTCAACAGCGCCAGAT	3	-	88898159-88898208	3qF1	Mus musculus farnesyl diphosphate synthetase (Fdps), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate [goid 4161] [evidence IEA]; Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = diphosphate + trans,trans-farnesyl diphosphate [goid 4337] [evidence IEA]	6030492I17Rik; AI256750; mKIAA1293; MGC107162; Fdpsl1	6030492I17Rik; AI256750; mKIAA1293; MGC107162; Fdpsl1
Mus musculus	Riken	ILMN_204315	ILMN_204315	6330503H08RIK	ri|6330503H08|PX00042B08|AK031938|2341					AK031938	6330503H08Rik		ILMN_2564036	001090128	S	2045	AGCAATAGCTGAGCAGGGAGCCATCGTCATGGAGAGAGGAACAGGCTGAT										
Mus musculus	MEEBO	ILMN_217650	ILMN_217650	FGD3	scl030938.1_113	NM_015759.1			7657086	NM_015759.1	Fgd3		ILMN_2685919	001240736	S	2684	GTGAGAGCATGGAGAATGGCCACTACGAAGCAAATGTCACCCGAGCAGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216001	ILMN_216001	HDGF	NM_008231.3	NM_008231.3		15191	142365231	NM_008231.3	Hdgf	NP_032257.2	ILMN_1244324	000360068	S	1013	CTGCTGTCTGGGTGCTACTGGGGAAACTGGCCATGGCCTGCAAACTGGGA	3	+	87718867-87718916	3qF1	Mus musculus hepatoma-derived growth factor (Hdgf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	AI118077; D3Ertd299e	AI118077; D3Ertd299e
Mus musculus	RefSeq	ILMN_216001	ILMN_216001	HDGF	NM_008231.3	NM_008231.3		15191	142365231	NM_008231.3	Hdgf	NP_032257.2	ILMN_2744435	002750039	S	1021	TGGGTGCTACTGGGGAAACTGGCCATGGCCTGCAAACTGGGAACCCTTTC	3	+	87718875-87718924	3qF1	Mus musculus hepatoma-derived growth factor (Hdgf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	AI118077; D3Ertd299e	AI118077; D3Ertd299e
Mus musculus	Riken	ILMN_207064	ILMN_207064	6430521C12RIK	ri|6430521C12|PX00648C24|AK078221|1086					AK078221	6430521C12Rik		ILMN_1249789	007210204	S	764	TCACCGCGGAAGGCATGCTGGAGTCTGTGACACTTGGCCTGCAGAACTGA										
Mus musculus	MEEBO	ILMN_192336	ILMN_192336	2900041M22RIK	scl40684.2.1_4				51766552	XM_484098	2900041M22Rik		ILMN_1216969	006020377	S	12	CCAGCTCCCAAACTGAGCCTTCGGAAGAAAGGCCTTTTGTTAGGGGAGCC										
Mus musculus	RefSeq	ILMN_212772	ILMN_212772	SERPINB3B	NM_198680.1	NM_198680.1		383548	38371729	NM_198680.1	Serpinb3b	NP_941373.1	ILMN_3001787	000070523	S	1483	GCATGCATCTGTGCCCTGTGTGAAGCAAGCTAGAGAAAATCAGACCTTCC	1	-	108981607-108981656	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3B (Serpinb3b), mRNA.			 [goid 4869] [evidence IDA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IDA]	Scca2-rs; MGC118408; Scca2-rs1	Scca2-rs; MGC118408; Scca2-rs1
Mus musculus	RefSeq	ILMN_197670	ILMN_197670	ADH6B	XM_110439.5	XM_110439.5		229871	94369940	XM_110439.5	Adh6b	XP_110439.5	ILMN_1213295	004540546	S	1116	GGGAAAATGCATCCGTTGTGTCCTCTCTATGAGACCCTGATGGTGACCGG	3	+	138295164-138295172:138296061-138296091:138296092-138296101		PREDICTED: Mus musculus alcohol dehydrogenase 6B (class V) (Adh6b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_194212	ILMN_194212	A630076E03RIK	scl00320777.1_39						A630076E03Rik		ILMN_1252303	004850431	S	2	AATGGTATGTGCAGTAAGGGGGCTTTGACACCAGTTTCCAGGGACTTGGG										
Mus musculus	RefSeq	ILMN_184202	ILMN_262009	B3GALT1	NM_020283.2	NM_020283.2		26877	66392576	NM_020283.2	B3galt1	NP_064679.2	ILMN_2701875	004010307	S	874	GGTATATGCCTAGAGATTTGTACCCTGACAGCAACTACCCACCGTTCTGT	2	+	67956658-67956707	2qC1.3	Mus musculus UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 (B3galt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [evidence IDA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]	beta3GalT-I; beta3GalT1; 6330417G03Rik	beta3GalT-I; beta3GalT1; 6330417G03Rik
Mus musculus	RefSeq	ILMN_187129	ILMN_262009	B3GALT1	NM_020283.2	NM_020283.2		26877	66392576	NM_020283.2	B3galt1	NP_064679.2	ILMN_2441400	005960220	S	4837	TGTAAAATGTTGGTTGAAAGCACGATGCAATTGTACAGGCCCATCTGTCA	2	+	67960621-67960670	2qC1.3	Mus musculus UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 (B3galt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [evidence IDA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]	beta3GalT-I; beta3GalT1; 6330417G03Rik	beta3GalT-I; beta3GalT1; 6330417G03Rik
Mus musculus	RefSeq	ILMN_210673	ILMN_238277	4921511H13RIK	XM_904396.2	XM_904396.2		207932	94400806	XM_904396.2	4921511H13Rik	XP_909489.2	ILMN_2608035	005720554	S	2091	GCTGTCCTTATGGTGGTGACGTAAAATGGGCTAGGAGTACAGTAGAGGCC				16qC3.3	PREDICTED: Mus musculus RIKEN cDNA 4921511H13 gene (4921511H13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198999	ILMN_198999	LOC215879	XM_121997.2	XM_121997.2			38090414	XM_121997.2	LOC215879		ILMN_2533689	000460671	S	971	ACTTCTTGGCCTTAGCTCGGGAGCTGGACATCATGGAGCCCAAGGTACCC										
Mus musculus	RefSeq	ILMN_186424	ILMN_249633	UBE2J1	NM_019586.3	NM_019586.3		56228	84370273	NM_019586.3	Ube2j1	NP_062532.2	ILMN_1254000	000050452	S	3291	GGCTTCTTCACTGATCAGCATAGCACATGAGTACACATCAAATTAGTTCA	4	+	33139108-33139157	4qA5	Mus musculus ubiquitin-conjugating enzyme E2, J1 (Ube2j1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISS]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	Ubc6p; Ncube; 1110030I22Rik; 0710008M05Rik; Ncube1	Ubc6p; Ncube; 1110030I22Rik; 0710008M05Rik; Ncube1
Mus musculus	RefSeq	ILMN_220423	ILMN_220423	PCDHGA3	NM_033586.2	NM_033586.2		93711	40254132	NM_033586.2	Pcdhga3	NP_291064.1	ILMN_1226799	005720451	S	2301	CGACGTTGGTACTCATCACGCCTACAGGCTTCAGGAAATGGATTGGCTGG	18	+	37836289-37836338	18qB3	Mus musculus protocadherin gamma subfamily A, 3 (Pcdhga3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217845	ILMN_250599	PRL7C1	NM_026206.2	NM_026206.2		67505	141801710	NM_026206.2	Prl7c1	NP_080482.1	ILMN_2688297	000610563	S	626	CCTTTATGGACAGATCTGGCATCCTTACAGGCAACTAACAAAGAACGTCA	13	-	27865704-27865753	13qA3.1	Mus musculus prolactin family 7, subfamily c, member 1 (Prl7c1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	1600017N11Rik; Prplo; PLP-O; RP23-20A22.3; Prlpo	1600017N11Rik; Prplo; PLP-O; RP23-20A22.3; Prlpo
Mus musculus	RefSeq	ILMN_196070	ILMN_196070	TMSB4X	NM_021278.2	NM_021278.2		19241	86476080	NM_021278.2	Tmsb4x	NP_067253.1	ILMN_2806159	001940370	S	383	GCTGCCCCTTTCACATCAAAGAATCAGAACTACTGAGCAGGAAGGCCTCC	X	-	163645263-163645312	XqF5	Mus musculus thymosin, beta 4, X chromosome (Tmsb4x), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers [goid 42989] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ptmb4	Ptmb4
Mus musculus	Riken	ILMN_206213	ILMN_206213	C130072A16RIK	ri|C130072A16|PX00171H22|AK081724|2428					AK081724	C130072A16Rik		ILMN_1219573	004230639	S	411	GCCGGGCGTGTGAATGGGTCTCAGGCATCTGTATTTGCTGCTGTCTGCTA										
Mus musculus	RefSeq	ILMN_220487	ILMN_220487	RBP3	NM_015745.2	NM_015745.2		19661	133892245	NM_015745.2	Rbp3	NP_056560.1	ILMN_2722695	002680470	S	5142	TGTGACTGCTCTACAGGGCTTAAGCACTTAAATTCCAGGAATCCCTGCCC	14	+	34777268-34777317	14qB	Mus musculus retinol binding protein 3, interstitial (Rbp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	Irbp; MGC102323; Rbp-3	Irbp; MGC102323; Rbp-3
Mus musculus	RefSeq	ILMN_214963	ILMN_214963	TAC4	NM_053093.1	NM_053093.1		93670	16716382	NM_053093.1	Tac4	NP_444323.1	ILMN_1237288	002480246	S	790	TATCCCAGGCCTAGCACACAGTAGGGCTCAATCAACGACGAGTTAGCAGT	11	+	95130118-95130167	11qD	Mus musculus tachykinin 4 (Tac4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell [goid 43303] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor [goid 7217] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of saliva [goid 46878] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]	PPT-C; AW489379	PPT-C; AW489379
Mus musculus	Riken	ILMN_204822	ILMN_204822	C530046N22RIK	ri|C530046N22|PX00083I11|AK049758|2240					AK049758	C530046N22Rik		ILMN_1220671	006350075	S	1319	CGAGCATCATCGACTTATTCAACCAGGTCGCGGACAGGAGAGTTATTAGC										
Mus musculus	MEEBO	ILMN_209310	ILMN_209310	ASPH	scl0002830.1_24	NM_023066.1			12746447	NM_023066.1	Asph		ILMN_2610809	005340615	S	2276	TGACTCTTTTGAGCACGAGGTTTGGCAGGATGCCTCGTCTTTCCGGCTGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191662	ILMN_191662	HRAS1	scl30498.4_24				6680270	NM_008284	Hras1		ILMN_2481071	003130437	S	5	GGGATGGTGGACAGATGTGACCAAGACCTTCGCATGGACAATTTGAACAG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IPI]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence TAS]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212563	ILMN_212563	9430015G10RIK	NM_145557.2	NM_145557.2		230996	141802565	NM_145557.2	9430015G10Rik	NP_663532.1	ILMN_2627845	004880437	S	2006	CTAGGCTTTGAGGGGGCCACTGGCAGTTTATGGATCTAATTGACCCTTGG	4	+	155500850-155500899	4qE2	Mus musculus RIKEN cDNA 9430015G10 gene (9430015G10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201405	ILMN_201405	LOC385110	XM_358059.1	XM_358059.1			38093548	XM_358059.1	LOC385110		ILMN_1212660	003870725	S	325	TACAAAGGAGAGAAGAGGAAGCCCAAGAGCCTCGCTCCTGGCCAGATCCC										
Mus musculus	RefSeq	ILMN_186499	ILMN_310273	LOC100044766	XM_001473431.1	XM_001473431.1		100044766	149269562	XM_001473431.1	LOC100044766	XP_001473481.1	ILMN_2478697	002710209	S	1204	TTAATAATTCTAATGTGGACATATCCAAAATAAATGAAGTTCTTACAGCA					PREDICTED: Mus musculus similar to WW domain-containing adapter protein with coiled-coil, transcript variant 1 (LOC100044766), mRNA.					
Mus musculus	RefSeq	ILMN_188918	ILMN_310273	LOC100044766	XM_001473431.1	XM_001473431.1		100044766	149269562	XM_001473431.1	LOC100044766	XP_001473481.1	ILMN_2456835	006060673	S	4138	TTGTAATATTTGATCCAATTGCATTTTTGTAGTAAAACGTTAAACATTGC					PREDICTED: Mus musculus similar to WW domain-containing adapter protein with coiled-coil, transcript variant 1 (LOC100044766), mRNA.					
Mus musculus	RefSeq	ILMN_186499	ILMN_310273	LOC100044766	XM_001473431.1	XM_001473431.1		100044766	149269562	XM_001473431.1	LOC100044766	XP_001473481.1	ILMN_2494032	004880097	S	2203	ATGTAGATTTCTTGTAGATGTATCTTCACGTTGTAAATATGTTTTGTAGA					PREDICTED: Mus musculus similar to WW domain-containing adapter protein with coiled-coil, transcript variant 1 (LOC100044766), mRNA.					
Mus musculus	RefSeq	ILMN_199027	ILMN_311963	LOC100040505	XM_001475564.1	XM_001475564.1		100040505	149260943	XM_001475564.1	LOC100040505	XP_001475614.1	ILMN_1255916	006220347	S	1752	CGTCAACGCTGTGTCTTCGTTACCCACTGAAAAGCTGCAAGAGGCGCACT	10	+	71773699-71773748	10qB5.3	PREDICTED: Mus musculus similar to Hbs1l protein (LOC100040505), mRNA.					
Mus musculus	RefSeq	ILMN_198448	ILMN_198448	GM969	XM_355166.3	XM_355166.3		381229	94406034	XM_355166.3	Gm969	XP_355166.1	ILMN_1252475	000430041	S	3258	GAGAGTGATTTCCACGTGGGACATCGTTCCAGGCCTGGGGTAGGAAAATC	19	+	48109782-48109831	19qD1	PREDICTED: Mus musculus gene model 969, (NCBI) (Gm969), mRNA.					
Mus musculus	RefSeq	ILMN_219476	ILMN_219476	SLC27A4	NM_011989.3	NM_011989.3		26569	146134363	NM_011989.3	Slc27a4	NP_036119.1	ILMN_2709355	002570044	S	3538	TGCTCAAGGGCCCTCCTCCACTGTTGGACCTTCTCCTGTATCTGTGAGGT				2qB	Mus musculus solute carrier family 27 (fatty acid transporter), member 4 (Slc27a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence TAS]	BB144259; FATP4	BB144259; FATP4
Mus musculus	RefSeq	ILMN_236728	ILMN_236728	DDX27	NM_153065.2	NM_153065.2		228889	124249329	NM_153065.2	Ddx27	NP_694705.2	ILMN_2944784	005080487	S	2212	TGGCCCTTCCTTTGAAGAGAGGAAACAGTCAGGTCTGCCCCGCCAGAGGA				2qH3	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 (Ddx27), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	C86129	C86129
Mus musculus	RefSeq	ILMN_199456	ILMN_199456	LOC383503	XM_357097.1	XM_357097.1			38049402	XM_357097.1	LOC383503		ILMN_1216237	002510301	S	458	AAGGGACGCTGAGGTCAGGGCAGCTGATGAAGAAGAGGCACGGACGTTGT										
Mus musculus	RefSeq	ILMN_214560	ILMN_214560	LEAP2	NM_153069.3	NM_153069.3		259301	113374195	NM_153069.3	Leap2	NP_694709.1	ILMN_2649275	006840543	S	323	ACGACATTTTGGTTGGAGATAGATAAGTGAAGTAGTCTTTGTTTTTAATA	11	-	53235807-53235856	11qB1.3	Mus musculus liver-expressed antimicrobial peptide 2 (Leap2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		leap-2	leap-2
Mus musculus	RefSeq	ILMN_216474	ILMN_255108	CCDC116	NM_029779.1	NM_029779.1		76872	58037470	NM_029779.1	Ccdc116	NP_084055.1	ILMN_2764250	001770296	S	4070	AGAGTACTCCTGTCCTATCCTAATAGCTGGCCACTCAGCCAGCCCTGTTC	16	-	17139246-17139295	16qA3	Mus musculus coiled-coil domain containing 116 (Ccdc116), mRNA.				4930432J16Rik	4930432J16Rik
Mus musculus	RefSeq	ILMN_222806	ILMN_316592	2900075B16RIK	XM_001473089.1	XM_001473089.1		78506	149258691	XM_001473089.1	2900075B16Rik	XP_001473139.1	ILMN_1220828	006560091	S	461	TATTCATGACTCCATATGATTTTATTCTGGCTGTTACAACAGATGAGCCC				8qA4	PREDICTED: Mus musculus RIKEN cDNA 2900075B16 gene (2900075B16Rik), mRNA.					
Mus musculus	Riken	ILMN_204325	ILMN_204325	5330425C20RIK	ri|5330425C20|PX00054I04|AK030517|2418					AK030517	5330425C20Rik		ILMN_1237191	001990372	S	1808	CATGCCTACCTGGATGAGGTGTGTCCTAGCAGGAGTCAGTGAGTTACAGG										
Mus musculus	RefSeq	ILMN_211391	ILMN_211391	FGD4	NM_139234.2	NM_139234.2		224014	144226238	NM_139234.2	Fgd4	NP_631980.1	ILMN_2615357	007150240	S	2232	GAGCAATTTTTAACGATTATTATTCCATGCTGAAAATTTCAGCCCTGATA	16	-	16453686-16453735	16qA3	Mus musculus FYVE, RhoGEF and PH domain containing 4 (Fgd4), transcript variant gamma, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; Formation of a microspike, a thin, stiff projection extended from the surface of a migrating cell [goid 30035] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence ISO]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]	Frabp; 9330209B17Rik; 9030023J02Rik; ZFYVE6	Frabp; 9330209B17Rik; 9030023J02Rik; ZFYVE6
Mus musculus	Riken	ILMN_203183	ILMN_203183	ARNT	ri|A430101P05|PX00064O19|AK040475|2557					AK040475	Arnt		ILMN_1235370	005900193	S	2106	GTAGCGCCTCTTACCTGTCTGACCCTGTGTGTTGTTGTTTGTGGGATCTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]		
Mus musculus	RefSeq	ILMN_212845	ILMN_212845	KRT25	NM_133730.1	NM_133730.1		70810	19526921	NM_133730.1	Krt25	NP_598491.1	ILMN_1216096	006590594	S	1421	AAAGCTTCAAAGAAGACAAGGCATGCAATGTGTCTGGGAAATGAGCAAGC	11	-	99177338-99177387	11qD	Mus musculus keratin 25 (Krt25), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	mIRSa1; 4631426H08Rik; Krt25a; Ka38	mIRSa1; 4631426H08Rik; Krt25a; Ka38
Mus musculus	MEEBO	ILMN_195880	ILMN_195880	CLGN	scl33608.15_606				6753443	NM_009904	Clgn		ILMN_1220599	001450288	S	2	CGTGGCTGACAGGTCACTAAACTAAAACCCTGTGGGGGACACATGACATC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222999	ILMN_222999	ARMC10	NM_026034.3	NM_026034.3		67211	146135072	NM_026034.3	Armc10	NP_080310.1	ILMN_2757916	000450554	S	1907	GAAAACTTCTGGGACTGGGACTAGGGTACATAGATTTCTTTGTGTTCCTG				5qA3	Mus musculus armadillo repeat containing 10 (Armc10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Svh; 2810037C14Rik	Svh; 2810037C14Rik
Mus musculus	MEEBO	ILMN_219905	ILMN_219905	NF1	scl0018015.1_194	NM_010897.1			34878891	NM_010897.1	Nf1		ILMN_1231104	001170113	S	11640	TCCCTGCCTACAACCTTGTTGATAATGTAACCAGCAGGAGAACCTCTGCC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity [goid 45762] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IGI]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone tissue loss (resorption) [goid 45124] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of glia cell differentiation [goid 45685] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IGI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IGI]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of astrocyte differentiation [goid 48712] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence ISO]; Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation [goid 1937] [evidence ISO]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [evidence IGI]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IGI]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IGI]; The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [goid 48485] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of astrocyte differentiation [goid 48712] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IGI]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus [goid 42992] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Rac protein signal transduction [goid 35021] [evidence IGI]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte differentiation [goid 48715] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a neurotransmitter [goid 46929] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a neurotransmitter [goid 46929] [evidence IGI]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence IMP]; Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation [goid 1937] [evidence IMP]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence IGI]; The process aimed at the progression of a Schwann cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14044] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IMP]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22011] [evidence IMP]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The process by which the anatomical structures of the forebrain are generated and organized. Morphogenesis pertains to the creation of form. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 48853] [evidence IMP]; The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues [goid 21510] [evidence IMP]; Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32228] [evidence IGI]; Any process that activates or increases the activity of a GTPase of the Ras superfamily [goid 32320] [evidence IMP]; Any process that activates or increases the activity of a GTPase of the Ras superfamily [goid 32320] [evidence ISO]; A series of reactions, mediated by the intracellular phosphoinositide 3-kinase (PI3K). PI3K cascades lie downstream of many cell surface receptor linked signaling pathways and regulate numerous cellular functions [goid 14065] [evidence IMP]; The process aimed at the progression of an astrocyte that resides in the forebrain, from initial commitment of the cell to its fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function [goid 21897] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IMP]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IMP]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IGI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_202260	ILMN_202260	H13	ri|1200010F02|R000009C05|AK004690|2769					AK004690	H13		ILMN_1238747	004810056	S	2613	TGGTAATGTGCTGTGGCAGTCGGGAGCTTGAGAGGCTGAGGCGTGAGGTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194749	ILMN_194749	PCDH9	scl00211712.1_137				51768726	XM_139187	Pcdh9		ILMN_1260006	003610142	S	500	GTGTTGGAGCAAATCCTTCTTAACTGCAGCCTACCGGGAAAGGGGCAAGG						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_257188	ILMN_257188	OLFR335	NM_001081410.1	NM_001081410.1		666118	124487172	NM_001081410.1	Olfr335	NP_001074879.1	ILMN_2859908	005260224	S	718	ACCTGTGGCTCCCATCTCCTTGTGGTGTCTTTGTACTATGGGACACTTGC	2	+	36157778-36157827	2qB	Mus musculus olfactory receptor 335 (Olfr335), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR137-2	MOR137-2
Mus musculus	RefSeq	ILMN_213339	ILMN_213339	PDCD5	NM_019746.4	NM_019746.4		56330	118130647	NM_019746.4	Pdcd5	NP_062720.1	ILMN_2756658	004670670	S	301	CCTGAAAAAACTAAAGCAGTGGAGAACTACCTTATACAGATGGCGCGGTA	7	-	36428661-36428710	7qB2	Mus musculus programmed cell death 5 (Pdcd5), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC103124; AA408513; Tfar19; 2200003D22Rik	MGC103124; AA408513; Tfar19; 2200003D22Rik
Mus musculus	RefSeq	ILMN_220086	ILMN_220086	PIP4K2A	NM_008845.4	NM_008845.4		18718	126012549	NM_008845.4	Pip4k2a	NP_032871.3	ILMN_2717439	003140678	S	3398	CGAGAACAGTGCTAACAGTGTGCGCTCGAGTCATGATCCGGGCTTTACGA	2	-	18763906-18763955	2qA3	Mus musculus phosphatidylinositol-5-phosphate 4-kinase, type II, alpha (Pip4k2a), mRNA.		The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 5-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16309] [evidence IEA]	AW742916	AW742916
Mus musculus	RefSeq	ILMN_201840	ILMN_224585	COL27A1	NM_025685.3	NM_025685.3		373864	116063545	NM_025685.3	Col27a1	NP_079961.3	ILMN_1222523	005550707	S	6426	ACTTGGGAGAGGTGAGGAAGAGCAAGAGAAGCTGGGGGTGTGGAGAGGCA	4	+	62994816-62994865	4qB3	Mus musculus collagen, type XXVII, alpha 1 (Col27a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730512J02Rik; mKIAA1870; AI449266	5730512J02Rik; mKIAA1870; AI449266
Mus musculus	RefSeq	ILMN_184701	ILMN_224585	COL27A1	NM_025685.3	NM_025685.3		373864	116063545	NM_025685.3	Col27a1	NP_079961.3	ILMN_2687324	000430195	S	5579	CCTCCAAGGCCGAGTTTGCTGTGAGTCGGGTCCAGATGAATTTCTTGCAC	4	+	62990934-62990941:62992316-62992357	4qB3	Mus musculus collagen, type XXVII, alpha 1 (Col27a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730512J02Rik; mKIAA1870; AI449266	5730512J02Rik; mKIAA1870; AI449266
Mus musculus	RefSeq	ILMN_212895	ILMN_212895	EMID1	NM_080595.2	NM_080595.2		140703	118131093	NM_080595.2	Emid1	NP_542162.1	ILMN_2809701	001430079	S	1651	GGGCGGAAGTCTCAGTTCCCCTCCTGTAAAACCTTGGGGAGTCCTGTGTG	11	-	5026796-5026839:5027188-5027193	11qA1	Mus musculus EMI domain containing 1 (Emid1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RP23-338J18.3; AW122071; CO-5; Emu1	RP23-338J18.3; AW122071; CO-5; Emu1
Mus musculus	RefSeq	ILMN_186819	ILMN_225050	4921517B04RIK	XM_980082.1	XM_980082.1		70892	94371351	XM_980082.1	4921517B04Rik	XP_985176.1	ILMN_2438762	007330082	S	2215	GGAAGAACTATAGAACTGAAACTCTTGAACTCAATAAAAAGTCCGTGGGC				3qH2	PREDICTED: Mus musculus RIKEN cDNA 4921517B04 gene, transcript variant 1 (4921517B04Rik), mRNA.					
Mus musculus	Riken	ILMN_203971	ILMN_203971	TPP2	ri|A530031F21|PX00140I08|AK040859|1998					AK040859	Tpp2		ILMN_1218662	002340446	S	1476	GGGTGTGGGAGAACAACTAGGGTAAGTGGCTCACTAGTTCTTAGCGTTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_233892	ILMN_233892	B4GALNT4	NM_177897.3	NM_177897.3		330671	58372115	NM_177897.3	B4galnt4	NP_808565.2	ILMN_2789862	001440528	S	3013	CTTCGACTGCGACACTTCTACCACCACTATCACTCGAAGCGAGGCATGTG	7	+	148257926-148257975	7qF5	Mus musculus beta-1,4-N-acetyl-galactosaminyl transferase 4 (B4galnt4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + N-acetyl-beta-D-glucosaminyl group = UDP + N-acetyl-beta-D-galactosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl group [goid 33842] [evidence IEA]	Gm1095; BC038881; MGC48196; beta4GalNAcT4	Gm1095; BC038881; MGC48196; beta4GalNAcT4
Mus musculus	RefSeq	ILMN_227919	ILMN_227919	ZBTB45	NM_001024699.1	NM_001024699.1		232879	85701533	NM_001024699.1	Zbtb45	NP_001019870.1	ILMN_2943849	007100711	S	1643	ACTGCTGGAGCGACACCTTGCAGCTCACCCTGCACCTTGATCGGGAGCCA	7	-	13591462-13591472:13591473-13591511	7qA1	Mus musculus zinc finger and BTB domain containing 45 (Zbtb45), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm157; Zfp499; MGC106784	Gm157; Zfp499; MGC106784
Mus musculus	RefSeq	ILMN_198498	ILMN_227919	ZBTB45	NM_001024699.1	NM_001024699.1		232879	85701533	NM_001024699.1	Zbtb45	NP_001019870.1	ILMN_1228750	001090411	S	1882	GGGCCCCTGCCACCTCAGAGACCATTTCCAGATTGAGCTGGGCAAACACA	7	-	13591223-13591272	7qA1	Mus musculus zinc finger and BTB domain containing 45 (Zbtb45), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm157; Zfp499; MGC106784	Gm157; Zfp499; MGC106784
Mus musculus	RefSeq	ILMN_201539	ILMN_201539	SRY	NM_011564.1	NM_011564.1		21674	6755760	NM_011564.1	Sry	NP_035694.1	ILMN_1255639	000870575	S	1117	GCTGACATCACTGGTGAGCATACACCATACCAGGAGCACCTCAGCACAGC	Y	-	1918402-1918451	YqA1	Mus musculus sex determining region of Chr Y (Sry), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IGI]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IGI]; The specification of male sex of an individual organism [goid 30238] [evidence IGI]	The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Tdf; MGC129295; Tdy	Tdf; MGC129295; Tdy
Mus musculus	RefSeq	ILMN_217034	ILMN_217034	PSD2	NM_028707.3	NM_028707.3		74002	117676386	NM_028707.3	Psd2	NP_082983.3	ILMN_2678366	000630544	S	4023	CGAGCCAATCTTGCCTATTGTTTGGCCAACGGTTTGCAGTCTTGGGTGAC	18	+	36173787-36173836	18qB2	Mus musculus pleckstrin and Sec7 domain containing 2 (Psd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	EFA6C; AW125584; 6330404E20Rik	EFA6C; AW125584; 6330404E20Rik
Mus musculus	RefSeq	ILMN_241897	ILMN_241897	RAB25	NM_016899.2	NM_016899.2		53868	31980837	NM_016899.2	Rab25	NP_058595.2	ILMN_2781721	001580139	S	728	GCAAAGGTGTCCAAGCAGAAGCAGAACAGCACCCGGACCAGTGCCATCAC	3	-	88628238-88628287	3qF1	Mus musculus RAB25, member RAS oncogene family (Rab25), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV012978	AV012978
Mus musculus	RefSeq	ILMN_214821	ILMN_214821	NEUROG1	NM_010896.2	NM_010896.2		18014	47271508	NM_010896.2	Neurog1	NP_035026.1	ILMN_1244348	004610541	S	794	GTTCCGGGGCCGCTGCCTCCCCCTGCGCCACTGTGGCATCACCACTCTCT	13	-	56352681-56352730	13qB1	Mus musculus neurogenin 1 (Neurog1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that activates or increases the rate of progression from anaphase/telophase (high mitotic CDK activity) to G1 (low mitotic CDK activity) [goid 31536] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Math4C; Neurod3; ngn1; AKA	Math4C; Neurod3; ngn1; AKA
Mus musculus	RefSeq	ILMN_201555	ILMN_254537	STIM2	NM_001081103.1	NM_001081103.1		116873	124487384	NM_001081103.1	Stim2	NP_001074572.1	ILMN_1253850	007380669	S	3393	CTTAAAACATTCACATGCTTAAACTGCGGTCTGGGGCGTGGGGACCCAGG	5	+	54510802-54510851	5qC1	Mus musculus stromal interaction molecule 2 (Stim2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217654	ILMN_254537	STIM2	NM_001081103.1	NM_001081103.1		116873	124487384	NM_001081103.1	Stim2	NP_001074572.1	ILMN_2685958	004540364	S	315	ATGCTGCTCTTCGGGTTGTTGGTGGCCGGCGTGGCGGACGGATGCGATCT	5	+	54390123-54390172	5qC1	Mus musculus stromal interaction molecule 2 (Stim2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200218	ILMN_200218	LOC385974	XM_359019.1	XM_359019.1			38080979	XM_359019.1	LOC385974		ILMN_1220381	005900446	S	366	GCGGCATGAGCTCCCATCCCTAAGCAAGGACCTATCTCCAAATGGCAATT										
Mus musculus	MEEBO	ILMN_220459	ILMN_220459	4732457N14	scl26449.1.1_266	NM_183304.1			34303970	NM_183304.1	4732457N14		ILMN_1237514	005360307	S	3130	TGAAGGTGAGCGACCCTCACGCGGCTGGCCAGGTCACGCATCAGCATCTT										
Mus musculus	RefSeq	ILMN_195397	ILMN_227027	ASCL2	NM_008554.2	NM_008554.2		17173	66792797	NM_008554.2	Ascl2	NP_032580.2	ILMN_2515236	007150246	S	1286	ATCTACTTTTTATCAATTAACTTGAACTGTTGTAGGACTCTACTGAAAAT	7	-	150152966-150153015	7qF5	Mus musculus achaete-scute complex homolog 2 (Drosophila) (Ascl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	2410083I15Rik; Mash2	2410083I15Rik; Mash2
Mus musculus	RefSeq	ILMN_227027	ILMN_227027	ASCL2	NM_008554.2	NM_008554.2		17173	66792797	NM_008554.2	Ascl2	NP_032580.2	ILMN_2919900	002970730	S	1001	CCGATGGAGCAGGAGCTGCTTGACTTTTCCAGTTGGTTAGGGGGCTACTG	7	-	150153811-150153822:150153823-150153860	7qF5	Mus musculus achaete-scute complex homolog 2 (Drosophila) (Ascl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	2410083I15Rik; Mash2	2410083I15Rik; Mash2
Mus musculus	MEEBO	ILMN_208931	ILMN_208931	AIM1	scl37999.19_246	NM_172393.1			27369514	NM_172393.1	Aim1		ILMN_2590917	001580008	S	3263	GACCTTTCAGCCTGGTTTCTCTAGGGCCACCCGCAGGATGACTGCTTCAT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_234753	ILMN_234753	OLFR115	NM_001011753.1	NM_001011753.1		257908	58801293	NM_001011753.1	Olfr115	NP_001011753.1	ILMN_2937251	000540025	S	428	GGGCTTTGGCAGCTGTGTGGCTAAGTGGAGGTGTCTCAGGAACACTATAC	17	-	37754735-37754784	17qB1	Mus musculus olfactory receptor 115 (Olfr115), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR218-11P	MOR218-11P
Mus musculus	MEEBO	ILMN_188102	ILMN_188102	2410022M11RIK	scl069755.2_89						2410022M11Rik		ILMN_2449817	007100241	S	12	CCGTCGGTGCCTGGCCGAGCACGCGCTCTCCGGCCTGCCCAGCGCCTGTC										
Mus musculus	RefSeq	ILMN_213218	ILMN_213218	GPR151	NM_181543.1	NM_181543.1		240239	33859814	NM_181543.1	Gpr151	NP_853521.1	ILMN_1242331	002710070	S	1518	AAACTTTCAGTGATTATAGGGCTCACGCTGGCTTTCCCCCAGGGTATCCC	18	-	42737739-42737788	18qB3	Mus musculus G protein-coupled receptor 151 (Gpr151), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	PGR7; GPCR; C130082O03Rik; nGPCR-2037; GalRL	PGR7; GPCR; C130082O03Rik; nGPCR-2037; GalRL
Mus musculus	RefSeq	ILMN_210824	ILMN_210824	TSC22D1	NM_009366.2	NM_009366.2		21807	47777349	NM_009366.2	Tsc22d1	NP_033392.1	ILMN_2723108	006040292	S	3	TCACTCGAGCCAGCACCACCGTTCTCACGCCCTGAGCTGCAGACAGCTAG	14	+	76904374-76904423	14qD3	Mus musculus TSC22 domain family, member 1 (Tsc22d1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	AA589566; TSC; TSC-22; Tgfb1i4; Egr5; AW105905	AA589566; TSC; TSC-22; Tgfb1i4; Egr5; AW105905
Mus musculus	Riken	ILMN_206173	ILMN_206173	D630002K12RIK	ri|D630002K12|PX00195L05|AK085265|821					AK085265	D630002K12Rik		ILMN_1234098	006770170	S	446	CTAGACCAGCAATTCTCAACCTGTGGCTCTCGATCCCTTGGGAGAGGTCG										
Mus musculus	RefSeq	ILMN_190007	ILMN_243969	AASDHPPT	NM_026276.2	NM_026276.2		67618	66773168	NM_026276.2	Aasdhppt	NP_080552.2	ILMN_2466368	000620553	S	2430	GGCATTGTTACTGGTAATTTGCATTTTCTTTTTATGAACCTATTGCTAAT	9	-	4295145-4295194	9qA1	Mus musculus aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase (Aasdhppt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass [goid 9059] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: CoA + substrate-serine = adenosine 3',5'-bisphosphate + substrate-serine-4'-phosphopantetheine. The transfer of the 4'-phosphopantetheine (Ppant) co-factor from coenzyme A to the hydroxyl side chain of the serine residue of acyl- or peptidyl-carrier protein (ACP or PCP) to convert them from the apo to the holo form [goid 8897] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]	CGI-80; LYS2; AASD-PPT; LYS5; 2010309J24Rik; 2810407B07Rik	CGI-80; LYS2; AASD-PPT; LYS5; 2010309J24Rik; 2810407B07Rik
Mus musculus	RefSeq	ILMN_212264	ILMN_212264	CTNNBL1	NM_025680.2	NM_025680.2		66642	31981220	NM_025680.2	Ctnnbl1	NP_079956.2	ILMN_2933655	001820019	S	2087	ACCCACAGCCCTGTGCTTCTGTCTTCAAATGCCTGGAGTAGGCGAGTCTG	2	+	157582761-157582810	2qH1	Mus musculus catenin, beta like 1 (Ctnnbl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	NAP; P14L; NYD-SP19; 5730471K09Rik; FLJ21108	NAP; P14L; NYD-SP19; 5730471K09Rik; FLJ21108
Mus musculus	RefSeq	ILMN_205099	ILMN_230710	BC026657	XM_622875.3	XM_622875.3		208618	94366269	XM_622875.3	BC026657	XP_622875.1	ILMN_1219050	001110717	S	2636	GAGGGCGTGGCTCAAGAGAAGAGCATCTGCCTGCCAAGAACAAGTCCATG				2qA3	PREDICTED: Mus musculus cDNA sequence BC026657, transcript variant 1 (BC026657), mRNA.					
Mus musculus	RefSeq	ILMN_228662	ILMN_228662	CDKL4	NM_001033443.1	NM_001033443.1		381113	84370313	NM_001033443.1	Cdkl4	NP_001028615.1	ILMN_2987967	001110110	S	2259	AGCTGCGTTAAACCTTGTGAAAGGGCGGGGCCATAACTGAACCTGTGGAG	17	-	80432498-80432547	17qE3	Mus musculus cyclin-dependent kinase-like 4 (Cdkl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	Gm942	Gm942
Mus musculus	RefSeq	ILMN_212435	ILMN_240905	ACMSD	NM_001033041.2	NM_001033041.2		266645	142354147	NM_001033041.2	Acmsd	NP_001028213.1	ILMN_2626393	006350021	S	369	ACCTAGCTGCCACCGTTGCCAGATACCCTCGAAGGTTTGTGGGTTTGGGG	1	+	129645612-129645661	1qE3	Mus musculus amino carboxymuconate semialdehyde decarboxylase (Acmsd), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving quinolinate, the anion of quinolinic acid, also known as 2,3-pyridinedicarboxylic acid [goid 46874] [evidence ISA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2 [goid 1760] [evidence ISA]		
Mus musculus	RefSeq	ILMN_219100	ILMN_219100	PLXDC2	NM_026162.4	NM_026162.4		67448	146135030	NM_026162.4	Plxdc2	NP_080438.2	ILMN_2704306	007400608	S	2875	GATTGCAGGGAACAATAGCTCACACAGGAGCAAAACCAAACATGGATGGA				2qA2-qA3	Mus musculus plexin domain containing 2 (Plxdc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]			Tem7r; AI646728; AU022916; 1200007L24Rik; 5430431D22Rik; AV231634	Tem7r; AI646728; AU022916; 1200007L24Rik; 5430431D22Rik; AV231634
Mus musculus	MEEBO	ILMN_215937	ILMN_215937	AFG3L1	scl0114896.3_29	NM_054070.1			16905098	NM_054070.1	Afg3l1		ILMN_2665422	007550400	S	2237	AATTTGTAGAGGGCACCGGCAGCCTAGAGGAGGACACATCCCTTCCTGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	Riken	ILMN_204776	ILMN_204776	GPR49, FEX, GPCR	ri|C130018C02|PX00167P04|AK047873|4796					AK047873	Gpr49, FEX, GPCR		ILMN_1241448	004040193	S	4597	CCTTGGAGGCACGGCCATGTCTTGAGGGCTTTGAAAAGAGGAAGACGCAT										
Mus musculus	Riken	ILMN_202217	ILMN_202217	2410051C13RIK	ri|2410051C13|ZX00080K13|AK010703|2007					AK010703	2410051C13Rik		ILMN_1255882	005900554	S	1595	GCTCCTCTCATGCAGCTGTGCTGTGTGCATCCCATTGACTGTGGGTTAGG										
Mus musculus	RefSeq	ILMN_215326	ILMN_215326	2810432L12RIK	NM_025944.2	NM_025944.2		67063	31560201	NM_025944.2	2810432L12Rik	NP_080220.2	ILMN_2658135	002000066	S	2789	GGGGACTTAGGGCGTGTGGCTTTCAACTGAATAGTAGCTGTTTGAGCCCA	4	-	49597455-49597504	4qB1	Mus musculus RIKEN cDNA 2810432L12 gene (2810432L12Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI835809; 9330170P15Rik	AI835809; 9330170P15Rik
Mus musculus	RefSeq	ILMN_223680	ILMN_223680	LMO2	NM_008505.3	NM_008505.3		16909	40254347	NM_008505.3	Lmo2	NP_032531.1	ILMN_2767605	007570537	S	1518	CTGTTTTTAGACACCTTCATTTTGAGGTGAGGCGCCCCACAGATTGTTTC	2	+	103821843-103821892	2qE2	Mus musculus LIM domain only 2 (Lmo2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IPI]	Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte differentiation [goid 45647] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Rbtn2; Rhom-2; Rbtn-2; Ttg2	Rbtn2; Rhom-2; Rbtn-2; Ttg2
Mus musculus	RefSeq	ILMN_213856	ILMN_213856	KIF17	NM_010623.3	NM_010623.3		16559	118130047	NM_010623.3	Kif17	NP_034753.1	ILMN_2704842	004250082	S	3261	CCCGGAAATGCCCCAGCCCCGGCCCTTCCGCCTAGAGTCCCTTGACATCC	4	+	137857234-137857283	4qD3	Mus musculus kinesin family member 17 (Kif17), mRNA.	Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IDA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	5930435E01Rik; mKIAA1405; Kif17b; AW492270	5930435E01Rik; mKIAA1405; Kif17b; AW492270
Mus musculus	RefSeq	ILMN_213856	ILMN_213856	KIF17	NM_010623.3	NM_010623.3		16559	118130047	NM_010623.3	Kif17	NP_034753.1	ILMN_1237897	005360494	S	1730	AGTATGAGACTGCGGTGAAGCCCACCATCCTCTCCATGCCCGACATGCCA	4	+	137843934-137843983	4qD3	Mus musculus kinesin family member 17 (Kif17), mRNA.	Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IDA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	5930435E01Rik; mKIAA1405; Kif17b; AW492270	5930435E01Rik; mKIAA1405; Kif17b; AW492270
Mus musculus	RefSeq	ILMN_200565	ILMN_200565	LOC384361	XM_357598.1	XM_357598.1			38083761	XM_357598.1	LOC384361		ILMN_1249320	007210056	S	526	GCAGCCAAGGGCATGACAGAATCACAACCCCCAGAGAAGAACGAGACCGG										
Mus musculus	RefSeq	ILMN_188761	ILMN_250639	DISP2	NM_170593.2	NM_170593.2		214240	118130048	NM_170593.2	Disp2	NP_733481.1	ILMN_1254036	000730010	S	6289	TTTGCATATAATGATGCATATTCTCCTATATTTAAATCGTCTCTAGAGTA	2	+	118620770-118620819	2qE5	Mus musculus dispatched homolog 2 (Drosophila) (Disp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DispB; AI840597; mKIAA1742; B230210L08Rik	DispB; AI840597; mKIAA1742; B230210L08Rik
Mus musculus	RefSeq	ILMN_216831	ILMN_216831	OLFR1160	NM_146649.2	NM_146649.2		258643	112983621	NM_146649.2	Olfr1160	NP_666860.2	ILMN_1252644	002850661	S	599	CCTACACACATGACATAATATTGGTGGTGTTTGCAAGTTTGGTGGAAGCT	2	-	87846285-87846334	2qD	Mus musculus olfactory receptor 1160 (Olfr1160), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR173-1	MOR173-1
Mus musculus	RefSeq	ILMN_242443	ILMN_242443	TMPRSS11C	NM_001030297.2	NM_001030297.2		435845	100815530	NM_001030297.2	Tmprss11c	NP_001025468.1	ILMN_3160678	003990356	S	1000	GATGTAGTGGTCACTGGGTGGGGAACGTTAAAATCGGATGGAGACAGTCC	5	-	86664589-86664599:86666646-86666684	5qE1	Mus musculus transmembrane protease, serine 11c (Tmprss11c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Tmprss13	Tmprss13
Mus musculus	RefSeq	ILMN_198934	ILMN_198934	LOC208080	XM_146931.2	XM_146931.2			38089881	XM_146931.2	LOC208080		ILMN_2533444	004230131	S	1233	AGCAAGACCGGATCAAGGAGGTGCTGTTGGTCCACGGTAATCGGCGCGAA										
Mus musculus	RefSeq	ILMN_196895	ILMN_196895	LOC380756	XM_354669.1	XM_354669.1			38049441	XM_354669.1	LOC380756		ILMN_2526174	005270129	S	165	CAGACTTAATGAACAAGCCATGTCTGCACTGCTTGGGGAGGAGGATGAGG										
Mus musculus	RefSeq	ILMN_201197	ILMN_201197	LOC382069	XM_356148.1	XM_356148.1			38089763	XM_356148.1	LOC382069		ILMN_2541433	005690088	S	2399	CGAGGCCCCAGCAGGCACTGAAACAGCATCTACCACCTCAAGTTCAGACC										
Mus musculus	RefSeq	ILMN_207385	ILMN_241363	EG665413	XM_976757.1	XM_976757.1		665413	94386569	XM_976757.1	EG665413	XP_981851.1	ILMN_1257642	007400753	S	1620	ATCTGCCACTTCACTAAGGGCTGATGCCAGGCTGCTCTACCATCACACCC	9	-	108996710-108996759	9qF2	PREDICTED: Mus musculus predicted gene, EG665413 (EG665413), mRNA.					
Mus musculus	RefSeq	ILMN_227719	ILMN_227719	OLFR457	NM_146987.1	NM_146987.1		258989	22128962	NM_146987.1	Olfr457	NP_667198.1	ILMN_2984342	002350367	S	777	CATGCAGCCCCGCTCCACAGCCTCTGCTGAGCAGGACAAATTGGTTGTGC	6	-	42421349-42421398	6qB2.1	Mus musculus olfactory receptor 457 (Olfr457), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR257-1	MOR257-1
Mus musculus	RefSeq	ILMN_221927	ILMN_221927	FAM164A	NM_173181.3	NM_173181.3		67306	119637813	NM_173181.3	Fam164a	NP_775273.1	ILMN_1221011	000610129	S	2993	CTCTGTGGTCCATACTTTACTCTCATGCTGCTGTGCTGGGCAATAGTTTT	3	+	7553480-7553529	3qA1	Mus musculus family with sequence similarity 164, member A (Fam164a), mRNA.				MGC90536; AU023959; AI790358	MGC90536; AU023959; AI790358
Mus musculus	RefSeq	ILMN_222654	ILMN_229602	OLFR1339	NM_146852.1	NM_146852.1		258851	22129160	NM_146852.1	Olfr1339	NP_667063.1	ILMN_2752937	007550634	S	820	GACAAGAAACTGGCTCTGTTCTACAATGTCATCTCTGCTTTCCTCAACCC	4	+	118407955-118408004	4qD2.1	Mus musculus olfactory receptor 1339 (Olfr1339), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR258-2	MOR258-2
Mus musculus	RefSeq	ILMN_211705	ILMN_211705	OLFR275	NM_146858.1	NM_146858.1		258857	22129148	NM_146858.1	Olfr275	NP_667069.1	ILMN_1222352	003120086	S	621	CCCATTGCCAATGTTGCTCATTTGTGTCTCCTATGCATCTATCCTCTCCA	4	+	52838891-52838940	4qB2	Mus musculus olfactory receptor 275 (Olfr275), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR262-2	MOR262-2
Mus musculus	RefSeq	ILMN_233735	ILMN_233735	CYP4A31	NM_201640.1	NM_201640.1		545670	46559415	NM_201640.1	Cyp4a31	NP_964002.1	ILMN_2960044	000060364	S	1232	AACCCGAAGGTGTGGCCAAACCCAGAGGTTTGCACCAGACTCTCCCCGAC	4	+	115027216-115027231:115027391-115027424		Mus musculus cytochrome P450, family 4, subfamily a, polypeptide 31 (Cyp4a31), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC18880	MGC18880
Mus musculus	MEEBO	ILMN_210230	ILMN_210230	4930505O20RIK	scl34600.2.1_325	XM_134492.2			38089352	XM_134492.2	4930505O20Rik		ILMN_1239675	003120092	S	1683	GATGCGACCCTTCATTCTAACACATCAGTATGTACTCATTTTCCAGGATC										
Mus musculus	MEEBO	ILMN_219311	ILMN_219311	MGL2	scl0001401.1_29	NM_145137.1			21553092	NM_145137.1	Mgl2		ILMN_2707099	001010047	S	805	AACGGACCAAAATGGGCCCTGGCGATGGGTGGATGGGACCGACTTTGACA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222014	ILMN_222014	ZFP786	NM_177882.2	NM_177882.2		330301	31342764	NM_177882.2	Zfp786	NP_808550.1	ILMN_2876265	005550224	S	2383	GGCTTAGCCAACTGTTTGCAATGATAGAGGCTGACTGGAGTTGAGGTGGG	6	-	47749248-47749254:47749255-47749297	6qB2.3	Mus musculus zinc finger protein 786 (Zfp786), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	A730012O14Rik	A730012O14Rik
Mus musculus	RefSeq	ILMN_219436	ILMN_262033	4933426I21RIK	XM_903582.3	XM_903582.3		71163	149257074	XM_903582.3	4933426I21Rik	XP_908675.2	ILMN_2708859	000840435	S	786	GAGGAGTGTGGGAAGATCTTCAACCGTGTCTCCAACCTTGTTGCACACAG	7	+	28611006-28611055	7qA3	PREDICTED: Mus musculus RIKEN cDNA 4933426I21 gene (4933426I21Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218919	ILMN_251390	MCTP1	NM_030174.2	NM_030174.2		78771	119964711	NM_030174.2	Mctp1	NP_084450.2	ILMN_2701948	007610471	S	4134	AAATGTCGATAAGCCTGACAATCTATAACCTCAGATATACCTAGTGGATG	13	+	77170916-77170965	13qC1	Mus musculus multiple C2 domains, transmembrane 1 (Mctp1), mRNA.				2810465F10Rik	2810465F10Rik
Mus musculus	Riken	ILMN_206524	ILMN_206524	D930020N02RIK	ri|D930020N02|PX00201D09|AK086317|1969					AK086317	D930020N02Rik		ILMN_2580737	003060709	S	1887	TGTCAGAAGGGCAGAGCCGCACCTCTAGCTCCAGCGACGTTCCCAAATCT										
Mus musculus	RefSeq	ILMN_198361	ILMN_198361	LOC232047	XM_144788.2	XM_144788.2			38084310	XM_144788.2	LOC232047		ILMN_2531414	002940411	S	960	GGGAAGAGGACAGGAGGACAGGCAGAAGGCAGAAACTGAGAGAGTTCAGA										
Mus musculus	RefSeq	ILMN_234028	ILMN_234028	SLC9A8	NM_178371.3	NM_178371.3		77031	46909604	NM_178371.3	Slc9a8	NP_848458.2	ILMN_3156529	002510546	A	4094	CATGGCAGCACAGGCTGGTGAGTGGTAGAGTTGTACTGAAGGCTCTCTTC	2	+	167302163-167302212	2qH3	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 8 (Slc9a8), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]; Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion [goid 51453] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(in) + H+(out) = K+(out) + H+(in) [goid 15386] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IDA]	1200006P13Rik; 6430709P13Rik; NHE8; AI182282	1200006P13Rik; 6430709P13Rik; NHE8; AI182282
Mus musculus	RefSeq	ILMN_208852	ILMN_234028	SLC9A8	NM_178371.3	NM_178371.3		77031	46909604	NM_178371.3	Slc9a8	NP_848458.2	ILMN_1230339	006550474	S	4111	GTGAGTGGTAGAGTTGTACTGAAGGCTCTCTTCACAAGCCTGGGTTTCTT	2	+	167302180-167302229	2qH3	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 8 (Slc9a8), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]; Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion [goid 51453] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(in) + H+(out) = K+(out) + H+(in) [goid 15386] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IDA]	1200006P13Rik; 6430709P13Rik; NHE8; AI182282	1200006P13Rik; 6430709P13Rik; NHE8; AI182282
Mus musculus	RefSeq	ILMN_208852	ILMN_234028	SLC9A8	NM_178371.3	NM_178371.3		77031	46909604	NM_178371.3	Slc9a8	NP_848458.2	ILMN_2595992	002340707	S	2008	CCCAGCCTGCTTTTGGGAAGGCTCCTATGGCCCCTGTGGGCACAATGAAA	2	+	167300077-167300126	2qH3	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 8 (Slc9a8), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]; Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion [goid 51453] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(in) + H+(out) = K+(out) + H+(in) [goid 15386] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IDA]	1200006P13Rik; 6430709P13Rik; NHE8; AI182282	1200006P13Rik; 6430709P13Rik; NHE8; AI182282
Mus musculus	MEEBO	ILMN_193346	ILMN_193346	OLFR469	scl0258418.1_214				33239107	NM_146426	Olfr469		ILMN_2775879	006350594	S	781	ATTTATGTGATGCCCAAATCAAGCTTCTCCACTGAATCCAGAACAAGGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_228618	ILMN_228618	OVOL2	NM_152947.1	NM_152947.1		107586	23308706	NM_152947.1	Ovol2	NP_694455.1	ILMN_3131909	000830601	A	553	GGGGTACAGCAGCAGTATGCCTACAAGCAGCGTCGCGACAAACTCTACGT	2	-	144131522-144131571	2qG1	Mus musculus ovo-like 2 (Drosophila) (Ovol2), transcript variant B, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The process by which the edges of the neural plate thicken and move up to form a U-shaped structure called the neural groove [goid 1842] [evidence IMP]; The process by which the anatomical structures of the gut are generated and organized during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48558] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Ovo2; movo2; MOVO; M-OVO; 1810007D21Rik; Zfp339; 1700108N11Rik; M-OVO-A; M-OVO-B	Ovo2; movo2; MOVO; M-OVO; 1810007D21Rik; Zfp339; 1700108N11Rik; M-OVO-A; M-OVO-B
Mus musculus	RefSeq	ILMN_200930	ILMN_258422	LOC635671	XM_910791.1	XM_910791.1		635671	83002251	XM_910791.1	LOC635671	XP_915884.1	ILMN_2540507	001450450	S	284	CCCAATTTCAAGGGGATAATCATTATGCAACTGTGAGGACGACACCAGAG					PREDICTED: Mus musculus similar to odorant binding protein Ia (LOC635671), mRNA.					
Mus musculus	RefSeq	ILMN_211008	ILMN_211008	SLC36A3	NM_172258.2	NM_172258.2		215332	31559778	NM_172258.2	Slc36a3	NP_758462.1	ILMN_1254994	001440008	S	1543	ACATAAGCTGTGCCACCATTGTCAAGGACATCATGATCAGCATCCTGGGC	11	-	54938490-54938539	11qB1.3	Mus musculus solute carrier family 36 (proton/amino acid symporter), member 3 (Slc36a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			PAT3; tramdorin2; TRAMD2	PAT3; tramdorin2; TRAMD2
Mus musculus	MEEBO	ILMN_215296	ILMN_215296	OLFR600	scl30932.1.1_55	XM_145784.1			20839152	XM_145784.1	Olfr600		ILMN_2657741	003450543	S	601	GCCTCATGGTTATTGTAGCATCTGTGGGGATTGATCTACTTTTGGTCATC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219617	ILMN_254034	CCDC89	XM_133591.7	XM_133591.7		70054	94380854	XM_133591.7	Ccdc89	XP_133591.4	ILMN_2711321	002030403	S	1406	GTCTCCAGTCAATATTTCAAGTCCATGTGCCTTAGATTTATGGCAAAAGC	7	+	97576227-97576276	7qE1	PREDICTED: Mus musculus coiled-coil domain containing 89 (Ccdc89), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_219617	ILMN_254034	CCDC89	XM_133591.7	XM_133591.7		70054	94380854	XM_133591.7	Ccdc89	XP_133591.4	ILMN_2736703	000610259	S	891	CTGCTGGGCCTGCAGAACCAGCAAGCCTGTGACCATGCCAAGGAGACCGA	7	+	97575712-97575761	7qE1	PREDICTED: Mus musculus coiled-coil domain containing 89 (Ccdc89), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_202867	ILMN_202867	4933421P21RIK	ri|4933421P21|PX00020J14|AK030205|2224					AK030205	4933421P21Rik		ILMN_1236634	002450408	S	1184	GAGTTCCTCTTGAGGAGTATCAGCCAGCCCGTGGCGAAAAAGGATCCCTT										
Mus musculus	RefSeq	ILMN_221797	ILMN_233733	STX4A	NM_009294.3	NM_009294.3		20909	133892174	NM_009294.3	Stx4a	NP_033320.1	ILMN_2776834	006650386	S	870	GGAGCGCAGTATCCGAGAGCTCCATGAGATCTTTACGTTTCTAGCTACGG	7	+	134990076-134990125	7qF3	Mus musculus syntaxin 4A (placental) (Stx4a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence TAS]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Stx4; Syn4	Stx4; Syn4
Mus musculus	RefSeq	ILMN_192278	ILMN_239660	2810008M24RIK	NM_001048250.2	NM_001048250.2		75616	142350660	NM_001048250.2	2810008M24Rik	NP_001041715.1	ILMN_2486600	002810050	S	1382	GTAGAGCCAGCAGTGCAGATGCCTTGTGCTGGTGACACCTTGGGTTCTGT	13	+	108838858-108838907	13qD2.1	Mus musculus RIKEN cDNA 2810008M24 gene (2810008M24Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_189481	ILMN_189481	GDF5	scl18448.2.1_82				6679980	NM_008109	Gdf5		ILMN_2461650	006020519	S	11	CTGCCCGGGGCCTCTTCATTTCTCTCCAGACTCTCCAGAGAAGTTGTAGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; The process, occurring after embryonic development, by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35129] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IMP]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of chondrocyte differentiation [goid 32332] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199536	ILMN_199536	LOC382703	XM_356632.1	XM_356632.1			38074058	XM_356632.1	LOC382703		ILMN_1217715	003180064	S	68	CAGCATTGAAAAGTCCTGTCGTCTGTGGACGGCAGCCTGATGGCTCAAGC										
Mus musculus	RefSeq	ILMN_217408	ILMN_255681	PLEKHM3	NM_001039493.1	NM_001039493.1		241075	87162467	NM_001039493.1	Plekhm3	NP_001034582.1	ILMN_2682863	004250458	S	3517	CCTTCCCCAGAGCCCTCCATCGGCAGGACCCACCTGTCGTTTGAATGTTT	1	-	64840690-64840739	1qC2	Mus musculus pleckstrin homology domain containing, family M, member 3 (Plekhm3), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI449570; A230102O09Rik	AI449570; A230102O09Rik
Mus musculus	RefSeq	ILMN_191839	ILMN_255681	PLEKHM3	NM_001039493.1	NM_001039493.1		241075	87162467	NM_001039493.1	Plekhm3	NP_001034582.1	ILMN_2482672	005690161	S	8310	CGCAATAGCTAATGTGCTAGTTTACGTGGTCCCTGTTGTCTGGATCTGAT	1	-	64835897-64835946	1qC2	Mus musculus pleckstrin homology domain containing, family M, member 3 (Plekhm3), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI449570; A230102O09Rik	AI449570; A230102O09Rik
Mus musculus	RefSeq	ILMN_222186	ILMN_222186	FARP2	NM_145519.1	NM_145519.1		227377	21704021	NM_145519.1	Farp2	NP_663494.1	ILMN_2745925	005340154	S	3631	TCTCCAGATCAGCAAAAGCTGCTCTGGTTCCCATCGCACATGCCCATGTG	1	+	95518293-95518342	1qD	Mus musculus FERM, RhoGEF and pleckstrin domain protein 2 (Farp2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISO]; The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence ISO]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence ISO]	D030026M03Rik; AI465173; KIAA0793; Fir; mKIAA0793; BC009153	D030026M03Rik; AI465173; KIAA0793; Fir; mKIAA0793; BC009153
Mus musculus	RefSeq	ILMN_209523	ILMN_209523	D630005B22RIK	NM_198643.1	NM_198643.1		380950	38348523	NM_198643.1	D630005B22Rik	NP_941045.1	ILMN_2813109	007650112	S	1302	ACTCTGTCCAGACTTCAGCTGGTCTGGGAATGCGTAAGTGACACCGTCTA	15	+	6284317-6284366		Mus musculus RIKEN cDNA D630005B22 gene (D630005B22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196588	ILMN_196588	DEFCR-RS1	NM_007844.2	NM_007844.2		13218	113679693	NM_007844.2	Defcr-rs1	NP_031870.2	ILMN_2993174	006520059	S	9	AGCTCCTGCTCACTAATCTTCCAGGTGACTCCCAGCCATGAAGACACTAG	8	-	22466641-22466654:22466655-22466690	8qA2	Mus musculus defensin related sequence cryptdin peptide (paneth cells) (Defcr-rs1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]		CRS1C-2; 2010300L12Rik; 2010319H24Rik	CRS1C-2; 2010300L12Rik; 2010319H24Rik
Mus musculus	RefSeq	ILMN_227849	ILMN_227849	1700081D17RIK	NM_028526.1	NM_028526.1		73523	62857894	NM_028526.1	1700081D17Rik	NP_082802.1	ILMN_3097791	003400332	A	302	GAAACCTGGAGGAGGGAAACCTGGAGGCAGCGGACGAGGATGTTTTCTCC	14	+	68582689-68582738	14qD2	Mus musculus RIKEN cDNA 1700081D17 gene (1700081D17Rik), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]			AI429082; 1700051A02Rik	AI429082; 1700051A02Rik
Mus musculus	RefSeq	ILMN_220786	ILMN_220786	RHOX3A	NM_194063.2	NM_194063.2		382209	73088779	NM_194063.2	Rhox3a	NP_918952.2	ILMN_2928374	006100059	S	432	AAAATGAAGAAGATGGAGGACAGGTGGAGTCGGCATTGGGAGCCACAGCC	X	+	34795334-34795383	XqA3.3	Mus musculus reproductive homeobox 3A (Rhox3a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm1138; AY147207; Prx	Gm1138; AY147207; Prx
Mus musculus	RefSeq	ILMN_196528	ILMN_324943	LOC100044294	XM_001471475.1	XM_001471475.1		100044294	149259128	XM_001471475.1	LOC100044294	XP_001471525.1	ILMN_1234172	001990482	S	256	ATCAGAAGCCACCATCCCTGGCAAGACACCATCCTGAAGGCACTGGGACT					PREDICTED: Mus musculus hypothetical protein LOC100044294 (LOC100044294), mRNA.					
Mus musculus	Riken	ILMN_202512	ILMN_202512	1700123D08RIK	ri|1700123D08|ZX00078E08|AK007246|1195					AK007246	1700123D08Rik		ILMN_1260105	004280008	S	1143	CCACCTCGCCCAACCAGCCCCAGGCGGCCAATGTAAAACATGAAGCAGAA										
Mus musculus	RefSeq	ILMN_220833	ILMN_220833	PALMD	NM_023245.3	NM_023245.3		114301	89363041	NM_023245.3	Palmd	NP_075734.3	ILMN_3126277	001440300	A	2063	CTGAGAGCCGTGGTGCCCACCTGAATAACCTCTGAAGGAGAAGCCACGAA	3	-	116621461-116621507:116621508-116621510	3qG1	Mus musculus palmdelphin (Palmd), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]		PALML; 4631423C22Rik	PALML; 4631423C22Rik
Mus musculus	RefSeq	ILMN_220833	ILMN_220833	PALMD	NM_023245.3	NM_023245.3		114301	89363041	NM_023245.3	Palmd	NP_075734.3	ILMN_3050134	003360408	I	559	GGCTCCTGGATGGAATCGGCAGTGGAAAAGAACACGAAGAGATGAAGAAG	3	-	116650881-116650930	3qG1	Mus musculus palmdelphin (Palmd), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]		PALML; 4631423C22Rik	PALML; 4631423C22Rik
Mus musculus	MEEBO	ILMN_215867	ILMN_215867	D430050G20	scl43772.1.770_9	XM_147774.2			28526366	XM_147774.2	D430050G20		ILMN_2664582	006940474	S	63	CATAGTCTAGGCGGCAGGTAACCATGAACACACCGTTTTCTCAGGCTCTC										
Mus musculus	Riken	ILMN_201810	ILMN_201810	2610010G17RIK	ri|2610010G17|ZX00060P11|AK011368|1162					AK011368	2610010G17Rik		ILMN_1220575	000050427	S	976	AGTGGCAGTGGCAGGTGTGGTGGTGGGTAGTTGGGGGTGAAGACTTGAGT										
Mus musculus	RefSeq	ILMN_209792	ILMN_209792	CXCL11	NM_019494.1	NM_019494.1		56066	9507070	NM_019494.1	Cxcl11	NP_062367.1	ILMN_1247446	005720441	S	1002	GAAAAATATATAAATATGTACTTTGTTCTTTTCCTTGGTCATACTGTGAA	5	-	92789104-92789153	5qE2	Mus musculus chemokine (C-X-C motif) ligand 11 (Cxcl11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence TAS]	SCYB9B; H174; Scyb11; I-TAC; IP9; betaR1; ITAC; CXC11; b-R1	SCYB9B; H174; Scyb11; I-TAC; IP9; betaR1; ITAC; CXC11; b-R1
Mus musculus	RefSeq	ILMN_233840	ILMN_233840	TACC1	NM_199323.2	NM_199323.2		320165	110681725	NM_199323.2	Tacc1	NP_955355.1	ILMN_3126933	000010296	A	6240	TCACTGGGGTGGAGGTGGAGGGAGGCACACACTGCCTTGACTCCTGCTGT	8	-	26265205-26265254	8qA2	Mus musculus transforming, acidic coiled-coil containing protein 1 (Tacc1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle [goid 22027] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton [goid 32886] [evidence IMP]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	AA960202; B230378H13Rik; 4833447E04Rik	AA960202; B230378H13Rik; 4833447E04Rik
Mus musculus	RefSeq	ILMN_214704	ILMN_214704	CHRNB4	NM_148944.4	NM_148944.4		108015	146149322	NM_148944.4	Chrnb4	NP_683746.1	ILMN_2650936	001980291	S	1331	CAGGAAGCATTAGAGGGCGTCAGCTTCATCGCACAGCATTTGGAGAGTGA				9qB	Mus musculus cholinergic receptor, nicotinic, beta polypeptide 4 (Chrnb4), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IGI]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IMP]; The process of communication from a neuron to a smooth muscle in the bladder that contributes to the expulsion of urine from the body [goid 60084] [evidence IMP]; The process of communication from a neuron to a smooth muscle in the bladder that contributes to the expulsion of urine from the body [goid 60084] [evidence IGI]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Acrb4; Acrb-4	Acrb4; Acrb-4
Mus musculus	RefSeq	ILMN_209123	ILMN_209123	ABCA5	NM_147219.1	NM_147219.1		217265	22267467	NM_147219.1	Abca5	NP_671752.1	ILMN_1218274	003370632	S	20	GGACCGCGTCTCCGCGCAGAATTTCCGAGCTCCGTCACTTACCGCGGTCG	11	-	110198920-110198969	11qE1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 5 (Abca5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	mKIAA1888; B930033A02Rik; ABC13	mKIAA1888; B930033A02Rik; ABC13
Mus musculus	RefSeq	ILMN_209123	ILMN_209123	ABCA5	NM_147219.1	NM_147219.1		217265	22267467	NM_147219.1	Abca5	NP_671752.1	ILMN_2998335	000130220	S	4935	GTTCAGTCTCTCTCACAATCCTTCGCTAAGTTGGAAGAAGCAAAACGCAC	11	-	110134685-110134695:110135634-110135672	11qE1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 5 (Abca5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	mKIAA1888; B930033A02Rik; ABC13	mKIAA1888; B930033A02Rik; ABC13
Mus musculus	RefSeq	ILMN_211914	ILMN_211914	TXLNB	NM_138628.1	NM_138628.1		378431	20137009	NM_138628.1	Txlnb	NP_619534.1	ILMN_2886610	006330577	S	3637	GCTTGCCAATGCACACGAGGAGCTGGGAGGCAGTAGCCATATGTTGAAGG	10	+	17534320-17534369	10qA2	Mus musculus taxilin beta (Txlnb), mRNA.				Mdp77; 2310001N14Rik	Mdp77; 2310001N14Rik
Mus musculus	RefSeq	ILMN_200844	ILMN_200844	LOC382237	XM_356351.1	XM_356351.1			38086510	XM_356351.1	LOC382237		ILMN_1224447	001340259	S	198	GAGGGATCCTCCGGTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGAC										
Mus musculus	MEEBO	ILMN_188950	ILMN_188950	2210419D22RIK	scl073661.1_203						2210419D22Rik		ILMN_1246449	003800543	S	13	TAATGGCCAACATTTGGTCAGCCCTTGTCCGCTTATTCACTTCCCCCCTT										
Mus musculus	MEEBO	ILMN_195317	ILMN_195317	1700085B03RIK	scl26010.4.1_26						1700085B03Rik		ILMN_2514502	004730288	S	4	CGGGGGCTGAGCTCAGATGAGAAGATTTACAACAGAGAAAAGCTGTGTGA										
Mus musculus	Riken	ILMN_205058	ILMN_205058	C230071P17RIK	ri|C230071P17|PX00176O13|AK048812|4525					AK048812	C230071P17Rik		ILMN_1231787	000450162	S	4011	GACAGGCAGCACTCATGACTGATTTCATTCTGCTCTGGGCAATGCCTGCC										
Mus musculus	RefSeq	ILMN_222478	ILMN_222478	SLC38A3	NM_023805.2	NM_023805.2		76257	34328321	NM_023805.2	Slc38a3	NP_076294.2	ILMN_2750089	006100154	S	2242	CCCTGATCTCCAGCCCCGTTTCCAACACTTGGGCCCCAAATCTTGGGTAC	9	-	107553779-107553828	9qF1	Mus musculus solute carrier family 38, member 3 (Slc38a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of glutamine, 2-amino-4-carbamoylbutanoic acid, into, out of, within or between cells [goid 6868] [evidence IDA]; The directed movement of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid, into, out of, within or between cells [goid 15817] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of L-glutamine from one side of a membrane to the other. L-glutamine is 2-amino-4-carbamoylbutanoic acid [goid 15186] [evidence IDA]; Catalysis of the transfer of L-histidine from one side of a membrane to the other. L-histidine is 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 5290] [evidence IDA]	Slc38-3; 0610012J02Rik; Nat1; D9Ucla2	Slc38-3; 0610012J02Rik; Nat1; D9Ucla2
Mus musculus	Riken	ILMN_202557	ILMN_202557	1110002E23RIK	ri|1110002E23|R000015G04|AK003291|514					AK003291	1110002E23Rik		ILMN_1218725	006510095	S	226	GGCCCCTCAGCCAGGGGTGTAGCCAGAGAATGGAACTCCTGTGTATTCAG										
Mus musculus	RefSeq	ILMN_184982	ILMN_184982	TMEM8	NM_021793.1	NM_021793.1		60455	11140832	NM_021793.1	Tmem8	NP_068565.1	ILMN_1242391	004730379	S	2073	AGATGGATCGCAGGGGCATCTGGAACTTGATGGGACCTTGCGTCTTTGCT	17	+	26258528-26258577	17qA3.3	Mus musculus transmembrane protein 8 (five membrane-spanning domains) (Tmem8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	M83; AW490096	M83; AW490096
Mus musculus	RefSeq	ILMN_184982	ILMN_184982	TMEM8	NM_021793.1	NM_021793.1		60455	11140832	NM_021793.1	Tmem8	NP_068565.1	ILMN_3008238	004860609	S	3158	GCCCAATCTTTCTGGTCTCCTGGGGTCACTGAGCTGGTAGTGCTGTGTGC	17	+	26259894-26259943	17qA3.3	Mus musculus transmembrane protein 8 (five membrane-spanning domains) (Tmem8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	M83; AW490096	M83; AW490096
Mus musculus	RefSeq	ILMN_184982	ILMN_184982	TMEM8	NM_021793.1	NM_021793.1		60455	11140832	NM_021793.1	Tmem8	NP_068565.1	ILMN_1219908	002260129	S	3316	AAAGCACACTTTAGCCCCTGAAAGGGGAAATGTGTATATTCTGTTGGGGG	17	+	26260052-26260101	17qA3.3	Mus musculus transmembrane protein 8 (five membrane-spanning domains) (Tmem8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	M83; AW490096	M83; AW490096
Mus musculus	MEEBO	ILMN_186705	ILMN_186705	SCL0004025.1_69	scl0004025.1_69	AK042145.1			26088846	AK042145.1	scl0004025.1_69		ILMN_2437797	000780372	S	16	ACACGGTTGCTTTTGCCTTCTGTGAGATACTTGAAGATAGGGGCCATGTC										
Mus musculus	MEEBO	ILMN_190282	ILMN_190282	PRKAG3	scl16610.12.1_48				24371222	NM_153744	Prkag3		ILMN_2468772	005390091	S	6	CTGCGGCCTATGGATTTAGATAGGGGCCTGAAATGCTTGGTTTCTGGACC							The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IMP]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	Riken	ILMN_204063	ILMN_204063	A630072J24RIK	ri|A630072J24|PX00147D19|AK042224|2229					AK042224	A630072J24Rik		ILMN_1237692	000360113	S	2178	CCCAGCACCCAGAAAGCAGTTCACAGACAGTGCAGGCAAAACACCCATAC										
Mus musculus	MEEBO	ILMN_194122	ILMN_194122	4930577N17RIK	scl067746.2_24						4930577N17Rik		ILMN_1252510	001990367	S	1	GTCGCTGGGTTTGCTGGTCATGAAATTCGTGTGCCCTCTCTTGTATTTGC										
Mus musculus	RefSeq	ILMN_213717	ILMN_236844	OLFR1297	NM_146888.1	NM_146888.1		258890	22129110	NM_146888.1	Olfr1297	NP_667099.1	ILMN_2640048	003610706	S	654	CACATATATCCTTATCACTGTTCATCAGAATTCGAAAACTGGAGCTTCCA	2	-	111461526-111461575	2qE3	Mus musculus olfactory receptor 1297 (Olfr1297), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123603; MGC123604; MOR248-4	MGC123603; MGC123604; MOR248-4
Mus musculus	Riken	ILMN_206482	ILMN_206482	D430034D15RIK	ri|D430034D15|PX00194D02|AK085079|3774					AK085079	D430034D15Rik		ILMN_2580412	002070121	S	3078	GCAGCAGTTTATCAGGCCACACTTTGAGGTTTTGCAGCCATGTCTTTATG										
Mus musculus	RefSeq	ILMN_197562	ILMN_249147	GM414	NM_001018031.1	NM_001018031.1		229389	65301148	NM_001018031.1	Gm414	NP_001018041.1	ILMN_1255170	006860161	S	1464	AGTGTGGCTGGAAGTGTCAAAGGACTGGAATGGGCTGTATGTCGGCCCCG	3	+	69831933-69831982	3qE2	Mus musculus gene model 414, (NCBI) (Gm414), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_249147	ILMN_249147	GM414	NM_001018031.1	NM_001018031.1		229389	65301148	NM_001018031.1	Gm414	NP_001018041.1	ILMN_2941888	000610170	S	1506	CGGCCCCGAGGATGACAGCATCTTTAGTGGGTTCCTTCTGTACCCAGAGG	3	+	69831975-69832024	3qE2	Mus musculus gene model 414, (NCBI) (Gm414), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_216355	ILMN_216355	CABLES1	NM_022021.1	NM_022021.1		63955	11528507	NM_022021.1	Cables1	NP_071304.1	ILMN_1216100	005310398	S	1824	GGACATGAATGAAACCTTCAAGGAGAAGTTTCCTCACATTAAATTAACAC	18	+	12098268-12098317	18qA1	Mus musculus CDK5 and Abl enzyme substrate 1 (Cables1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence TAS]; Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells [goid 51302] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]	Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ik3-1; Cables	ik3-1; Cables
Mus musculus	RefSeq	ILMN_216355	ILMN_216355	CABLES1	NM_022021.1	NM_022021.1		63955	11528507	NM_022021.1	Cables1	NP_071304.1	ILMN_1217097	000870279	S	2952	CTCCATAGCGTGTATTCCTGTGCTCTATGTTAGAGTGCATAATGAGCGCG	18	+	12103823-12103872	18qA1	Mus musculus CDK5 and Abl enzyme substrate 1 (Cables1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence TAS]; Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells [goid 51302] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]	Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ik3-1; Cables	ik3-1; Cables
Mus musculus	RefSeq	ILMN_219776	ILMN_219776	METTL9	NM_021554.2	NM_021554.2		59052	34328258	NM_021554.2	Mettl9	NP_067529.2	ILMN_2713471	006580273	S	1036	GATATCAGAAGTGTCTTGGAGCCCACCCAAGGCAGGGTCATCCTGGCATT	7	+	128200832-128200881	7qF2	Mus musculus methyltransferase like 9 (Mettl9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610012D09Rik; Drev; AA517660; MNCb-5680	0610012D09Rik; Drev; AA517660; MNCb-5680
Mus musculus	RefSeq	ILMN_219776	ILMN_219776	METTL9	NM_021554.2	NM_021554.2		59052	34328258	NM_021554.2	Mettl9	NP_067529.2	ILMN_2782307	006380273	S	1606	GCTGTAGGGACTCATTCCCAGACAAAGCAATAGTCATGATGTCATGGAAC	7	+	128220132-128220181	7qF2	Mus musculus methyltransferase like 9 (Mettl9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610012D09Rik; Drev; AA517660; MNCb-5680	0610012D09Rik; Drev; AA517660; MNCb-5680
Mus musculus	MEEBO	ILMN_185681	ILMN_185681	NSEP1	scl23898.4_2				6756032	NM_011732	Nsep1		ILMN_2591082	000780059	S	994	ACGCCGGCTTACCATCTCTACCATCATCCGGTTTGGTCATCCAACAAGAA										
Mus musculus	RefSeq	ILMN_216115	ILMN_216115	PPIL1	NM_026845.3	NM_026845.3		68816	146141095	NM_026845.3	Ppil1	NP_081121.1	ILMN_2667550	002120047	S	749	CGTTCAGCCTCCAGCGTGAGTTCTTCCAGGAATATGCACAGCTCACTCGC				17qA3.3	Mus musculus peptidylprolyl isomerase (cyclophilin)-like 1 (Ppil1), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	1110060O10Rik; AI327391; Cypl1	1110060O10Rik; AI327391; Cypl1
Mus musculus	RefSeq	ILMN_186416	ILMN_230383	WDR36	NM_144863.3	NM_144863.3		225348	142374488	NM_144863.3	Wdr36	NP_659112.2	ILMN_1258644	007330592	S	2237	TTAGTTAAATAAATCTAAACACCTTGAAATTGTTAACTGAGGGCTCTGTT	18	+	33013000-33013049	18qB1	Mus musculus WD repeat domain 36 (Wdr36), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730444A13Rik; Ta-wdrp; MGC38421	5730444A13Rik; Ta-wdrp; MGC38421
Mus musculus	MEEBO	ILMN_189180	ILMN_189180	1110069O07RIK	scl14250.1.1_200						1110069O07Rik		ILMN_1235646	002340433	S	4	GTGATATCCCAAACAGGGTGAGAGTTCCTCCCGCTTTCTGAGCAGGCACG										
Mus musculus	RefSeq	ILMN_223074	ILMN_223074	4933427D06RIK	NM_175017.3	NM_175017.3		232217	124378057	NM_175017.3	4933427D06Rik	NP_778182.1	ILMN_2759015	002340653	S	2023	CCCAGGATCCCCAAGTGAGTTGAAAGGCACTAGAAGTTCAGACTAGATTG	6	+	89059433-89059482	6qD1	Mus musculus RIKEN cDNA 4933427D06 gene (4933427D06Rik), mRNA.				MGC107427	MGC107427
Mus musculus	RefSeq	ILMN_215864	ILMN_215864	IGFBP1	NM_008341.3	NM_008341.3		16006	142352345	NM_008341.3	Igfbp1	NP_032367.2	ILMN_1230739	004250347	S	1099	TCCAGGAACTAGTTTTTATACTCCACATACTGCTTGATACATGAAGCTGG	11	+	7102121-7102170	11qA1	Mus musculus insulin-like growth factor binding protein 1 (Igfbp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	IGFBP-1	IGFBP-1
Mus musculus	RefSeq	ILMN_235415	ILMN_235415	BC031181	NM_001001181.3	NM_001001181.3		407819	113679825	NM_001001181.3	BC031181	NP_001001181.1	ILMN_2913206	002480025	S	871	ATCACTGCAGGCGCAGCGGCGAGTGGACAGCTGGCCGAGACCAGCTCCAA	18	+	75169411-75169460	18qE3	Mus musculus cDNA sequence BC031181 (BC031181), mRNA.					
Mus musculus	RefSeq	ILMN_196737	ILMN_196737	IFNA13	NM_177347.2	NM_177347.2		230396	31340904	NM_177347.2	Ifna13	NP_796321.1	ILMN_2641897	002680273	S	677	GAACTCTACCTCTCTTTATATGCTTTCCTTTTAAAACTCATTTATTTTTG	4	-	88289637-88289686	4qC4	Mus musculus interferon alpha 13 (Ifna13), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185448	ILMN_185448	ZFP36L1	NM_007564.4	NM_007564.4		12192	145966761	NM_007564.4	Zfp36l1	NP_031590.1	ILMN_1247853	003140349	S	2791	CCAGGTTGGAGTTTTCCAATGTTGACATAAACAACTGGCGCACACACATA				12qC3	Mus musculus zinc finger protein 36, C3H type-like 1 (Zfp36l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IMP]; A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps: poly(A) tail shortening, deadenylylation-dependent decapping, and decay of the transcript body, and that can regulate mRNA stability [goid 288] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence ISO]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence ISO]	Berg36; cMG1; D530020L18Rik; AW742437; TIS11b; ERF1; Brf1; AW743212	Berg36; cMG1; D530020L18Rik; AW742437; TIS11b; ERF1; Brf1; AW743212
Mus musculus	RefSeq	ILMN_185448	ILMN_185448	ZFP36L1	NM_007564.4	NM_007564.4		12192	145966761	NM_007564.4	Zfp36l1	NP_031590.1	ILMN_2427108	003130646	S	1507	GCAACTTAGTGCCTTGTAATCTAACTTTGTCACTGTGACTACATTACCTC				12qC3	Mus musculus zinc finger protein 36, C3H type-like 1 (Zfp36l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IMP]; A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps: poly(A) tail shortening, deadenylylation-dependent decapping, and decay of the transcript body, and that can regulate mRNA stability [goid 288] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence ISO]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence ISO]	Berg36; cMG1; D530020L18Rik; AW742437; TIS11b; ERF1; Brf1; AW743212	Berg36; cMG1; D530020L18Rik; AW742437; TIS11b; ERF1; Brf1; AW743212
Mus musculus	RefSeq	ILMN_220498	ILMN_230562	CCDC55	NM_001012309.1	NM_001012309.1		237859	59858548	NM_001012309.1	Ccdc55	NP_001012309.1	ILMN_2722863	000150743	S	1588	GTCAGCTAGAGACAGGTATTTGGCCAGACAGATGGCGCGGATAAACGCAA	11	-	76859270-76859319	11qB5	Mus musculus coiled-coil domain containing 55 (Ccdc55), mRNA.				AL022898; 8030451K07; RP23-100P23.2; MGC107323; AI851076	AL022898; 8030451K07; RP23-100P23.2; MGC107323; AI851076
Mus musculus	MEEBO	ILMN_194345	ILMN_194345	C030014C12RIK	scl43324.1.1_319						C030014C12Rik		ILMN_1255126	006350424	S	1	GGCTTGGCTGTTGGAATAGCTTTCATATCCCCAGCACTCTAACCTCACAA										
Mus musculus	Riken	ILMN_204493	ILMN_204493	B230325I23RIK	ri|B230325I23|PX00160A05|AK045942|1893					AK045942	B230325I23Rik		ILMN_1257007	001440372	S	1533	GCCAGTGATGTTCTAGCATGTTCCAGGGGAGGGAGAGGGCTTTCAGGAAG										
Mus musculus	MEEBO	ILMN_212680	ILMN_212680	PAPD4	scl0100715.1_21	NM_133905.1			19527121	NM_133905.1	Papd4		ILMN_2635491	000160504	S	470	AAAGCTTTTCCTCTTGATGGTAAACGGCAGCGTTTCCATTCACCCCACCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group [goid 4652] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198590	ILMN_198590	LOC279638	XM_205256.3	XM_205256.3			38086353	XM_205256.3	LOC279638		ILMN_2588075	006580037	S	105	AGCAGAGGGGTGTTTAGACCAACTCACAGGGCACATGACACAAGTCTCTG										
Mus musculus	RefSeq	ILMN_209081	ILMN_209081	CORO2B	NM_175484.3	NM_175484.3		235431	148528986	NM_175484.3	Coro2b	NP_780693.2	ILMN_1216552	005050164	S	3233	AAGCACTGGTGTCAGGACAGTCACCGCCCTTTGGGTAGAGGAGATGTGGG				9qB	Mus musculus coronin, actin binding protein, 2B (Coro2b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	E130012P22Rik; CLIPINC	E130012P22Rik; CLIPINC
Mus musculus	RefSeq	ILMN_219756	ILMN_219756	EG237300	NM_177706.3	NM_177706.3		237300	142343736	NM_177706.3	EG237300	NP_808374.1	ILMN_1218298	004050563	S	2016	GCCAAGATACCTGACATCAGAGGAAGAGTAGAGACTTCACAGCCAGACCC	10	-	18499822-18499871	10qA3	Mus musculus predicted gene, EG237300 (EG237300), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	4933423E17	4933423E17
Mus musculus	RefSeq	ILMN_208794	ILMN_208794	CLOCK	NM_007715.5	NM_007715.5		12753	118131173	NM_007715.5	Clock	NP_031741.1	ILMN_2589603	004540471	S	7374	GCATAGTTACTAATTCAGGATATTTAAAACAGTGTTGAACAGCTCATCAG	5	-	76644032-76644081	5qC3.3	Mus musculus circadian locomoter output cycles kaput (Clock), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]	mKIAA0334; 5330400M04Rik	mKIAA0334; 5330400M04Rik
Mus musculus	RefSeq	ILMN_208794	ILMN_208794	CLOCK	NM_007715.5	NM_007715.5		12753	118131173	NM_007715.5	Clock	NP_031741.1	ILMN_2600964	003310685	S	1750	GATCCCTACTGATACTAGCACTCCTCCCAGACAGCATTTGCCAGCTCATG	5	-	76674534-76674560:76677367-76677389	5qC3.3	Mus musculus circadian locomoter output cycles kaput (Clock), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]	mKIAA0334; 5330400M04Rik	mKIAA0334; 5330400M04Rik
Mus musculus	RefSeq	ILMN_208794	ILMN_208794	CLOCK	NM_007715.5	NM_007715.5		12753	118131173	NM_007715.5	Clock	NP_031741.1	ILMN_2610973	004810445	S	7213	TGCCCTGAAATGTTGGCATGTCATTTCAGCGTTCCCATTTGAGTTGCTCT	5	-	76644193-76644242	5qC3.3	Mus musculus circadian locomoter output cycles kaput (Clock), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]	mKIAA0334; 5330400M04Rik	mKIAA0334; 5330400M04Rik
Mus musculus	RefSeq	ILMN_222316	ILMN_222316	NOD1	NM_172729.2	NM_172729.2		107607	142361399	NM_172729.2	Nod1	NP_766317.1	ILMN_1247710	002570154	S	3934	CCTCAGAAGTTGGAGGGTGACTGGACACAGTTAAGACTCAGAGAGCCAGC	6	-	54874073-54874122	6qB3	Mus musculus nucleotide-binding oligomerization domain containing 1 (Nod1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence RCA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence ISO]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISO]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	C230079P11; Card4; F830007N14Rik; Nlrc1	C230079P11; Card4; F830007N14Rik; Nlrc1
Mus musculus	MEEBO	ILMN_209269	ILMN_209269	C330013J21RIK	scl0078703.1_288	XM_110478.3			38075428	XM_110478.3	C330013J21Rik		ILMN_2594187	005270209	S	683	GTCGGGCTCTGGGGTGAGGAAGAGTTCAGTGATTTTGTATTCTTCACTAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189863	ILMN_254499	FANCC	NM_007985.2	NM_007985.2		14088	111185908	NM_007985.2	Fancc	NP_032011.2	ILMN_2678661	004480692	S	2620	TGAGCAGTGTGTGGGCTGTGACCCTCCTGCACATCTGCTATGAGAACCCT	13	-	63413309-63413358	13qB3	Mus musculus Fanconi anemia, complementation group C (Fancc), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IMP]		Facc; BB116513	Facc; BB116513
Mus musculus	RefSeq	ILMN_211596	ILMN_211596	CHAC1	NM_026929.3	NM_026929.3		69065	142385952	NM_026929.3	Chac1	NP_081205.1	ILMN_2617468	000540300	S	1467	GGTCTGTTCCTGGAAAACACTACAGTCCTTGTCCATTCTCAGTTGACCCA	2	+	119179974-119180023	2qE5	Mus musculus ChaC, cation transport regulator-like 1 (E. coli) (Chac1), mRNA.				1810008K03Rik	1810008K03Rik
Mus musculus	RefSeq	ILMN_236326	ILMN_236326	SEC14L3	NM_001029937.1	NM_001029937.1		380683	71480137	NM_001029937.1	Sec14l3	NP_001025108.1	ILMN_2810301	003990138	S	1503	AAAGAGAAAGAACCACGAAGGGAAGACAGGAGATGGGTGTCCTTGGGGCC	11	+	3976556-3976605	11qA1	Mus musculus SEC14-like 3 (S. cerevisiae) (Sec14l3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_199116	ILMN_236326	SEC14L3	NM_001029937.1	NM_001029937.1		380683	71480137	NM_001029937.1	Sec14l3	NP_001025108.1	ILMN_1241255	000050162	S	1267	CTCCCAGACGAGGGCATGCAGAAGTACGATGAGGAGCTCACCCCTGTCTA	11	+	3976320-3976369	11qA1	Mus musculus SEC14-like 3 (S. cerevisiae) (Sec14l3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_214280	ILMN_214280	ADAM28	NM_010082.2	NM_010082.2		13522	133892955	NM_010082.2	Adam28	NP_034212.1	ILMN_1229895	004730184	S	2627	CACTCACAGGGTGTTCGGAGTGTGAACTGACCCCTGGAAAGTGGGTTACA	14	-	69225369-69225418	14qD2	Mus musculus a disintegrin and metallopeptidase domain 28 (Adam28), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Dtgn1; C130072N01Rik; MDC-Ls; MDC-Lm; MDCL; D430033C21Rik; eMDCII; MDC-L	Dtgn1; C130072N01Rik; MDC-Ls; MDC-Lm; MDCL; D430033C21Rik; eMDCII; MDC-L
Mus musculus	RefSeq	ILMN_214280	ILMN_214280	ADAM28	NM_010082.2	NM_010082.2		13522	133892955	NM_010082.2	Adam28	NP_034212.1	ILMN_1259520	001660315	S	2951	TGGTGACCCCCAATTCCTCATTTTTTAATAATAGTGCACAAGGATGGTGG	14	-	69225045-69225094	14qD2	Mus musculus a disintegrin and metallopeptidase domain 28 (Adam28), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Dtgn1; C130072N01Rik; MDC-Ls; MDC-Lm; MDCL; D430033C21Rik; eMDCII; MDC-L	Dtgn1; C130072N01Rik; MDC-Ls; MDC-Lm; MDCL; D430033C21Rik; eMDCII; MDC-L
Mus musculus	RefSeq	ILMN_210591	ILMN_210591	GLRP1	NM_008132.2	NM_008132.2		14659	119709817	NM_008132.2	Glrp1	NP_032158.2	ILMN_1224898	001440180	S	1749	CTTCTGTCTGTGGTAGGACGGGGAAGTAAGAGAGACCAAGATGGGGTGTG	1	-	90396604-90396653	1qD	Mus musculus glutamine repeat protein 1 (Glrp1), mRNA.				GRP-1	GRP-1
Mus musculus	Riken	ILMN_205929	ILMN_205929	CLCN6	ri|B230311B16|PX00159E04|AK045787|2335					AK045787	Clcn6		ILMN_1231399	007200731	S	2091	TGCAGTGAAGCTCAGCCACCGCACACCACCAGCCAGAAACCCAGAACCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]		
Mus musculus	Riken	ILMN_204002	ILMN_204002	A630042M04RIK	ri|A630042M04|PX00145P15|AK041867|586					AK041867	A630042M04Rik		ILMN_1242626	002710064	S	41	TACTCTCCAGGGTCGCTGGGCTGGGCTGGACATGACCGTGCTGCGCTCGC										
Mus musculus	RefSeq	ILMN_199366	ILMN_199366	MTHFS	NM_026829.1	NM_026829.1		107885	18093091	NM_026829.1	Mthfs	NP_081105.1	ILMN_2895847	005490068	S	422	TTGACAAAGATGGCAACCGGCTGGGGCGGGGTAAGGGGTACTATGACACC	9	+	89037772-89037821	9qE3.1	Mus musculus 5, 10-methenyltetrahydrofolate synthetase (Mthfs), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate [goid 30272] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	1110034I12Rik; AI119695; 2310020H23Rik	1110034I12Rik; AI119695; 2310020H23Rik
Mus musculus	RefSeq	ILMN_186436	ILMN_186436	TRIM23	NM_030731.3	NM_030731.3		81003	146149249	NM_030731.3	Trim23	NP_109656.1	ILMN_2455830	007650259	S	3628	GCAGCAGTTGTTTCATGCTTATGGTTAACAGTTACTTTGCATGTGATGCA				13qD1	Mus musculus tripartite motif-containing 23 (Trim23), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6330516O20Rik; Arfd1; AI450195	6330516O20Rik; Arfd1; AI450195
Mus musculus	RefSeq	ILMN_213982	ILMN_312796	LOC100045877	XR_032069.1	XR_032069.1		100045877	149262187	XR_032069.1	LOC100045877		ILMN_2642969	003120037	S	1589	CGACCCAGAGAAACTGAGCCGTCGCAGTCACGACCTCCATACTCTGTGAT					PREDICTED: Mus musculus similar to Centaurin, beta 1 (LOC100045877), misc RNA.					
Mus musculus	MEEBO	ILMN_192305	ILMN_192305	SCL000065.1_58	scl000065.1_58	AK011426.1			12847542	AK011426.1	scl000065.1_58		ILMN_2486873	000670274	S	3	CCGGGGAGGCAAACGGTTCTAAGCCGGTTCTTCAGGTCTGCGGGAAGCCT										
Mus musculus	Riken	ILMN_204500	ILMN_204500	NEDD4B	ri|B230342E12|PX00160C22|AK046106|1914					AK046106	Nedd4b		ILMN_1243947	001510450	S	1793	CTGGGTGCTTGTCACCTAGCCTGACATTCTGAGTTCAATCCCTGGGACCC										
Mus musculus	RefSeq	ILMN_215642	ILMN_215642	RCVRN	NM_009038.1	NM_009038.1		19674	6677692	NM_009038.1	Rcvrn	NP_033064.1	ILMN_2661924	004210026	S	619	GAGGGGACCCTGGCCAATAAGGAAATTCTGCGACTGATCCAGTTTGAACC	11	+	67516406-67516455	11qB3	Mus musculus recoverin (Rcvrn), mRNA.		The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IMP]	CAR; MGC129468; S-modulin	CAR; MGC129468; S-modulin
Mus musculus	MEEBO	ILMN_216185	ILMN_216185	4933408N05RIK	scl34294.3.1_35	XM_150119.1			20886874	XM_150119.1	4933408N05Rik		ILMN_2668206	000580722	S	1220	CCAGCCAAGAGGAGTGAATACCACTCACAGGGGCAAAGGCAAGTGACCTG										
Mus musculus	RefSeq	ILMN_213931	ILMN_213931	LMO4	NM_010723.2	NM_010723.2		16911	33636769	NM_010723.2	Lmo4	NP_034853.1	ILMN_2642403	001010050	S	1295	GGCTCATAGCCGCTACTATGTAGAAATCCCCCCTACTTCTAATTTGCTGA	3	-	143851569-143851618	3qH2	Mus musculus LIM domain only 4 (Lmo4), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Etohi4; A730077C12Rik; Crp3	Etohi4; A730077C12Rik; Crp3
Mus musculus	MEEBO	ILMN_188768	ILMN_188768	9626953_2_RC	9626953_2_rc						9626953_2_rc		ILMN_1240922	001580112	S	10	GCGAGACCACAAGTCGGATGCAACTGCAAGAGGGTTTATTGGATACACGG										
Mus musculus	RefSeq	ILMN_212333	ILMN_256585	2310047M15RIK	XM_884663.3	XM_884663.3		69666	149263964	XM_884663.3	2310047M15Rik	XP_889756.1	ILMN_1223369	000050484	S	424	CACGTTACTCGTAGAAAACAGGATTAAGGAAGAAATGGAGACCTTTCCGG	13	+	34269911-34269960	13qA3.3	PREDICTED: Mus musculus RIKEN cDNA 2310047M15 gene, transcript variant 1 (2310047M15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218862	ILMN_218862	EIF4EBP3	NM_201256.2	NM_201256.2		108112	42476033	NM_201256.2	Eif4ebp3	NP_957708.1	ILMN_2895312	006480082	S	225	TACGCCACTACCCCGGGAGGCACCAGGATCATCTACGACAGAAAGTTCCT	18	+	36790258-36790276:36791256-36791286	18qB2	Mus musculus eukaryotic translation initiation factor 4E binding protein 3 (Eif4ebp3), mRNA.		Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of translational initiation [goid 45947] [evidence IEA]	Interacting selectively with eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation [goid 8190] [evidence IEA]	MGC74395; 4E-BP3; MGC130577	MGC74395; 4E-BP3; MGC130577
Mus musculus	MEEBO	ILMN_218186	ILMN_218186	IREBF1	scl0026573.1_330	NM_013714.1			7305186	NM_013714.1	Irebf1		ILMN_2692714	007210544	S	2354	CATTACTCACTTTAGGAGTTACAGCTCAAAAAATGCGACAGAGCCCGGAA										
Mus musculus	RefSeq	ILMN_218899	ILMN_218899	TADA2L	NM_172562.1	NM_172562.1		217031	27369795	NM_172562.1	Tada2l	NP_766150.1	ILMN_3009839	003460121	S	1738	TTTGGTGGAAGGAGAAGGGACCCAGGCCACAGCATTTCACCCCAAGAGGC	11	-	83895446-83895495	11qC	Mus musculus transcriptional adaptor 2 (ADA2 homolog, yeast)-like (Tada2l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	D030022J10Rik; AV319371	D030022J10Rik; AV319371
Mus musculus	MEEBO	ILMN_220978	ILMN_220978	A730030A06	scl44836.4.1_5				51829586	XM_488677	A730030A06		ILMN_2729398	005870242	S	601	ACTGAGCTATGGTTCAGTCTGGTTCACACACCAAGCCTTTGGAAGCCACG										
Mus musculus	Riken	ILMN_204502	ILMN_204502	B230342N21RIK	ri|B230342N21|PX00160E02|AK046118|460					AK046118	B230342N21Rik		ILMN_1251072	002190243	S	301	GGTGCAGCAACCTCACTTTGGCGGCGAAGAGGTCCTGAGTTCAATTCCCA										
Mus musculus	RefSeq	ILMN_221356	ILMN_221356	COL17A1	NM_007732.1	NM_007732.1		12821	6680963	NM_007732.1	Col17a1	NP_031758.1	ILMN_2879995	002510064	S	5311	TGGCTTCCACACACCATCCTGCACTTAGGAAATGGCATAAAAGACTGGGC	19	-	47720950-47720999	19qD1	Mus musculus collagen, type XVII, alpha 1 (Col17a1), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Bpag2; BP180; Bpag	Bpag2; BP180; Bpag
Mus musculus	RefSeq	ILMN_221356	ILMN_221356	COL17A1	NM_007732.1	NM_007732.1		12821	6680963	NM_007732.1	Col17a1	NP_031758.1	ILMN_1240481	002140148	S	5125	GGTGCAGATGCCAATCACCTTCCCACTGGCTTACAAAGCTTGACTGGTCG	19	-	47721136-47721185	19qD1	Mus musculus collagen, type XVII, alpha 1 (Col17a1), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Bpag2; BP180; Bpag	Bpag2; BP180; Bpag
Mus musculus	RefSeq	ILMN_221356	ILMN_221356	COL17A1	NM_007732.1	NM_007732.1		12821	6680963	NM_007732.1	Col17a1	NP_031758.1	ILMN_1216228	006770369	S	4652	AAGGGTCCCCGTCCTCCTGAGACCAAATCACCCAGCGACACTTGTTTTAG	19	-	47721609-47721658	19qD1	Mus musculus collagen, type XVII, alpha 1 (Col17a1), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Bpag2; BP180; Bpag	Bpag2; BP180; Bpag
Mus musculus	Riken	ILMN_202307	ILMN_202307	TRRP2	ri|8430436J05|PX00025C24|AK018463|1886					AK018463	Trrp2		ILMN_1220948	005090181	S	1584	GACAAAGGGTTTAGGGAAAGCCCAGCTTGAAGACCCTCCATGTGTGCGTG										
Mus musculus	RefSeq	ILMN_228893	ILMN_228893	2610021K21RIK	NM_030172.2	NM_030172.2		78767	118130699	NM_030172.2	2610021K21Rik	NP_084448.1	ILMN_2921958	004150131	S	1337	GCCCCTGGGCGCCAGTGATCACATCAAGTCACAACATACAGCTCAGCATC	12	-	100956423-100956472	12qE	Mus musculus RIKEN cDNA 2610021K21 gene (2610021K21Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	2610110A13Rik	2610110A13Rik
Mus musculus	RefSeq	ILMN_196408	ILMN_228893	2610021K21RIK	NM_030172.2	NM_030172.2		78767	118130699	NM_030172.2	2610021K21Rik	NP_084448.1	ILMN_2660136	005310209	S	1674	CCCCTAGGGACCATACGGTAGAGATGAACCAAGCCTGGACTTCCTCTGCT	12	-	100956086-100956135	12qE	Mus musculus RIKEN cDNA 2610021K21 gene (2610021K21Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	2610110A13Rik	2610110A13Rik
Mus musculus	RefSeq	ILMN_196602	ILMN_196602	EAR10	NM_053112.1	NM_053112.1		93725	21426866	NM_053112.1	Ear10	NP_444342.1	ILMN_1235857	007560228	S	319	AACATCACCAGTTGGAGGAGAACACCTTATACCCAATGCAGATACCAAGC	14	-	44500665-44500714	14qC1	Mus musculus eosinophil-associated, ribonuclease A family, member 10 (Ear10), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IDA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence ISS]		
Mus musculus	RefSeq	ILMN_209864	ILMN_209864	2010005H15RIK	NM_029733.2	NM_029733.2		76770	141802035	NM_029733.2	2010005H15Rik	NP_084009.1	ILMN_1234774	000520035	S	569	CAGCAAATTCTAAAGTGTCCTGACTCTTCTCCTTGTAAACAGATTTGGCC	16	+	36257524-36257530	16qB3	Mus musculus RIKEN cDNA 2010005H15 gene (2010005H15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220171	ILMN_220171	KLK11	NM_019974.1	NM_019974.1		56538	9910297	NM_019974.1	Klk11	NP_064358.1	ILMN_2780280	001850228	S	885	CATTCTGCCCTAAGAAGTCCTCAGCTGGGACCCTGGCATGTACTCTCTCC	7	+	51034369-51034418	7qB4	Mus musculus kallikrein related-peptidase 11 (Klk11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	TLSP; Prss20; 2310015I08Rik; MGC144345	TLSP; Prss20; 2310015I08Rik; MGC144345
Mus musculus	RefSeq	ILMN_220171	ILMN_220171	KLK11	NM_019974.1	NM_019974.1		56538	9910297	NM_019974.1	Klk11	NP_064358.1	ILMN_2718509	001170612	S	601	CTACCCGGGCAACATCACAGACACCATGCTGTGCGCCAGTGTTCGGAAAG	7	+	51033767-51033816	7qB4	Mus musculus kallikrein related-peptidase 11 (Klk11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	TLSP; Prss20; 2310015I08Rik; MGC144345	TLSP; Prss20; 2310015I08Rik; MGC144345
Mus musculus	RefSeq	ILMN_199431	ILMN_199431	LMO3	NM_207222.1	NM_207222.1		109593	46402194	NM_207222.1	Lmo3	NP_997105.1	ILMN_3062075	005290646	I	1706	GATGGCTGAGTCGCCCTGGGATCTGCTCACAGCCTTGGAACTGTCTGTAC	6	-	138329022-138329071	6qG1	Mus musculus LIM domain only 3 (Lmo3), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rbtn-3; Rbtn3; BB106490; AI854781	Rbtn-3; Rbtn3; BB106490; AI854781
Mus musculus	RefSeq	ILMN_199431	ILMN_199431	LMO3	NM_207222.1	NM_207222.1		109593	46402194	NM_207222.1	Lmo3	NP_997105.1	ILMN_3139548	003180719	A	589	CAGACTACGAGGAAGGCCTCATGAAAGAAGGCTATGCACCCCAGGTCCGC	6	-	138330139-138330188	6qG1	Mus musculus LIM domain only 3 (Lmo3), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rbtn-3; Rbtn3; BB106490; AI854781	Rbtn-3; Rbtn3; BB106490; AI854781
Mus musculus	RefSeq	ILMN_247906	ILMN_247906	MCC	NM_001033406.1	NM_001033406.1		328949	85701908	NM_001033406.1	Mcc	NP_001028578.1	ILMN_2918907	004830685	S	4376	GAGTCCACAGTGTTCCTGCCGGACACCTACCTTCAAGAGCCCGGTAACAA	18	-	44550809-44550858	18qB3	Mus musculus mutated in colorectal cancers (Mcc), mRNA.				D18Ertd451e; E330037C19	D18Ertd451e; E330037C19
Mus musculus	RefSeq	ILMN_198960	ILMN_247565	LOC673245	XR_004177.1	XR_004177.1		673245	94418826	XR_004177.1	LOC673245		ILMN_1233526	001660064	S	445	GCCCCTGTGTCTACCGTCTTGAAGTTCCACTAATCCGAAAAGTCTTCTGG					PREDICTED: Mus musculus similar to F-box and WD-40 domain protein 14 (LOC673245), mRNA.					
Mus musculus	Riken	ILMN_207063	ILMN_207063	AQR	ri|6030408H15|PX00646O11|AK077886|3104					AK077886	Aqr		ILMN_1243209	007400082	S	2618	CCCAGAGTGCTGAGAGTGTATGAGCTGGCCTACCTGGTTTCATTTGGCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212645	ILMN_212645	SENP5	NM_177103.2	NM_177103.2		320213	31342815	NM_177103.2	Senp5	NP_796077.1	ILMN_2978857	003140717	S	3023	GCTGGTGTGCTTAGGGGTATGGAGCTTGCTGGCACAGGGCTGATCTGAGA	16	-	31882562-31882611	16qB2	Mus musculus SUMO/sentrin specific peptidase 5 (Senp5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	SMT3IP3; A730063F07Rik	SMT3IP3; A730063F07Rik
Mus musculus	RefSeq	ILMN_212645	ILMN_212645	SENP5	NM_177103.2	NM_177103.2		320213	31342815	NM_177103.2	Senp5	NP_796077.1	ILMN_2978858	003360707	S	2915	GCTGTGGAAAGCCAGTCCCATTCACTTACACCAGCAGTCCCGTTTGCTGA	16	-	31882670-31882719	16qB2	Mus musculus SUMO/sentrin specific peptidase 5 (Senp5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	SMT3IP3; A730063F07Rik	SMT3IP3; A730063F07Rik
Mus musculus	Riken	ILMN_202259	ILMN_202259	NISCH	ri|1200007D05|R000008L11|AK004628|2613					AK004628	Nisch		ILMN_1237959	003610348	S	2186	TAGAAAGCATGCAGCCATAGACTTCTGGGGACAGGGCAGTCGGTCCAGGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]		
Mus musculus	RefSeq	ILMN_200812	ILMN_200812	LOC384601	XM_357737.1	XM_357737.1			38086290	XM_357737.1	LOC384601		ILMN_2540094	006280487	S	199	CGACTGCCAGCTGTCTCACTTCAAGATGTGCACGCATCAATTCAGGTACC										
Mus musculus	RefSeq	ILMN_223967	ILMN_242660	OLFR1049	NM_147016.2	NM_147016.2		259018	122056730	NM_147016.2	Olfr1049	NP_667227.2	ILMN_2772405	003190328	S	576	AGAAGAGACAGAATTATTGACTATATTGTTTTCAGCCTTCAATTTAATCT	2	-	86095223-86095272	2qD	Mus musculus olfactory receptor 1049 (Olfr1049), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR187-1	MOR187-1
Mus musculus	Riken	ILMN_204476	ILMN_204476	B130028C06RIK	ri|B130028C06|PX00157L02|AK045077|3043					AK045077	B130028C06Rik		ILMN_2565270	006550541	S	2621	TGTGGAGGTCAGAGGATAGCTTACAGGAGGGAATCAGTTCTTCTCCCATG										
Mus musculus	RefSeq	ILMN_249394	ILMN_249394	OLFR681	NM_207557.1	NM_207557.1		404318	46430573	NM_207557.1	Olfr681	NP_997440.1	ILMN_2781714	006220278	S	577	TGTGATGATGTCACTGTCAACCGTCTTTATCAGTTTGCTGGAGGCTGGAC	7	+	112270549-112270598	7qE3	Mus musculus olfactory receptor 681 (Olfr681), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129234; MGC129235; MOR40-14	MGC129234; MGC129235; MOR40-14
Mus musculus	RefSeq	ILMN_220264	ILMN_220264	CYP2J9	NM_028979.2	NM_028979.2		74519	118130572	NM_028979.2	Cyp2j9	NP_083255.1	ILMN_2719908	004260746	S	1701	GTCTGCTCCCATTTGAGCCGGTAAAATTAAGGTGACAGAGAGTGCGTGCA	4	-	96235313-96235362	4qC5	Mus musculus cytochrome P450, family 2, subfamily j, polypeptide 9 (Cyp2j9), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC141274; 8430417E17Rik	MGC141274; 8430417E17Rik
Mus musculus	RefSeq	ILMN_222480	ILMN_222480	CUEDC2	NM_024192.1	NM_024192.1		67116	13195619	NM_024192.1	Cuedc2	NP_077154.1	ILMN_1236822	006860594	S	899	TCGACAACCAAGTAGTGAGCACCAAGGGAGAGCGATTCAAAGATGTCCGG	19	-	46405249-46405298	19qC3	Mus musculus CUE domain containing 2 (Cuedc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		3010002G01Rik	3010002G01Rik
Mus musculus	RefSeq	ILMN_209231	ILMN_209231	TAS1R3	NM_031872.2	NM_031872.2		83771	118130760	NM_031872.2	Tas1r3	NP_114078.1	ILMN_2593836	004760349	S	3288	AAGGACAGAAAAGTTGCCGCAAGGCCCCTTACTGGCCAGCACCAGGGACA	4	-	155233553-155233602	4qE2	Mus musculus taste receptor, type 1, member 3 (Tas1r3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence TAS]	T1r3; Sac	T1r3; Sac
Mus musculus	RefSeq	ILMN_185363	ILMN_247490	GCC1	NM_028900.3	NM_028900.3		74375	141803462	NM_028900.3	Gcc1	NP_083176.2	ILMN_1216797	001240563	S	2546	TGAGGGACCAGAGCAGGGAGGGAGCCAACCTGGAATATCTCAAAAACATC	6	-	28368145-28368194	6qA3.3	Mus musculus golgi coiled coil 1 (Gcc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4932417P04Rik	4932417P04Rik
Mus musculus	RefSeq	ILMN_198212	ILMN_198212	LOC381117	XM_358508.1	XM_358508.1			38082920	XM_358508.1	LOC381117		ILMN_1255690	004200184	S	725	CAGGGCTTGGAATGGAGGGGGTGGAGTTGAGGAGATCACAGAGGACCTAG										
Mus musculus	RefSeq	ILMN_223861	ILMN_232553	PYROXD1	NM_183165.3	NM_183165.3		232491	141802981	NM_183165.3	Pyroxd1	NP_898988.2	ILMN_2770585	004180524	S	1371	CAAAGTCGTTATGCAGAATGGACGCATGATGGGAGCCGTCTTAATTGGTG	6	+	142310360-142310409	6qG2	Mus musculus pyridine nucleotide-disulphide oxidoreductase domain 1 (Pyroxd1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_255839	ILMN_255839	GNG7	NM_001038655.1	NM_001038655.1		14708	84579914	NM_001038655.1	Gng7	NP_001033744.1	ILMN_3074444	000460630	I	4	TTGCTATATCGAGCCTGCAGGAGAGCGGTGCCTGAGCCACGTGCCCATGT	10	-	80464057-80464106	10qC1	Mus musculus guanine nucleotide binding protein (G protein), gamma 7 (Gng7), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses guanylyl cyclase activity [goid 7168] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IMP]	AI840417	AI840417
Mus musculus	RefSeq	ILMN_200246	ILMN_315880	LOC666038	XM_001478809.1	XM_001478809.1		666038	149254405	XM_001478809.1	LOC666038	XP_001478859.1	ILMN_1225694	002900360	S	368	GCCAGAAACTGAACATCTTTGCCCCCAAAAGTCTGCCGCTCTCCAAGCTC				5qG2	PREDICTED: Mus musculus similar to Solute carrier family 35, member E3 (LOC666038), mRNA.					
Mus musculus	RefSeq	ILMN_212658	ILMN_212658	LMCD1	NM_144799.1	NM_144799.1		30937	21450156	NM_144799.1	Lmcd1	NP_659048.1	ILMN_2628940	005720164	S	193	AAGAGGAGTGGCTTGTCTGCGGTGCAAGGGAATGTGCTCCGGCTTCGAGC	6	+	112255076-112255125	6qE3	Mus musculus LIM and cysteine-rich domains 1 (Lmcd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC29184; AW455500; dyxin; AW553074	MGC29184; AW455500; dyxin; AW553074
Mus musculus	RefSeq	ILMN_212658	ILMN_212658	LMCD1	NM_144799.1	NM_144799.1		30937	21450156	NM_144799.1	Lmcd1	NP_659048.1	ILMN_2907540	002710347	S	1406	TTCCTAGCTGCAACCAACTAAAGACACACTGGTATCCTGCCAGGGAGCCC	6	+	112280151-112280200	6qE3	Mus musculus LIM and cysteine-rich domains 1 (Lmcd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC29184; AW455500; dyxin; AW553074	MGC29184; AW455500; dyxin; AW553074
Mus musculus	RefSeq	ILMN_212658	ILMN_212658	LMCD1	NM_144799.1	NM_144799.1		30937	21450156	NM_144799.1	Lmcd1	NP_659048.1	ILMN_1247343	007160022	S	1136	TGTGAGCAGCTGCTGAGCGGCCGTGCGTACATCGTCACCAAGGGTCAGCT	6	+	112279881-112279930	6qE3	Mus musculus LIM and cysteine-rich domains 1 (Lmcd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC29184; AW455500; dyxin; AW553074	MGC29184; AW455500; dyxin; AW553074
Mus musculus	RefSeq	ILMN_213352	ILMN_213352	TBC1D9	NM_027758.3	NM_027758.3		71310	146141131	NM_027758.3	Tbc1d9	NP_082034.1	ILMN_1216560	001990070	S	4111	GTAAGAAAATATCTCTGTTCAATGCTAATAAAGACAGCCGTGCTCTGAGG				8qC2	Mus musculus TBC1 domain family, member 9 (Tbc1d9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AI847101; AW490653; 4933431N12Rik; C76116	AI847101; AW490653; 4933431N12Rik; C76116
Mus musculus	RefSeq	ILMN_213352	ILMN_213352	TBC1D9	NM_027758.3	NM_027758.3		71310	146141131	NM_027758.3	Tbc1d9	NP_082034.1	ILMN_1228165	002690243	S	4003	GCCTACGAGGCATGGCTACCAGAACCTACTTTATTCATTGATTTCCCCCC				8qC2	Mus musculus TBC1 domain family, member 9 (Tbc1d9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AI847101; AW490653; 4933431N12Rik; C76116	AI847101; AW490653; 4933431N12Rik; C76116
Mus musculus	RefSeq	ILMN_207497	ILMN_207497	2410091N08RIK	XM_146886.1	XM_146886.1			20888904	XM_146886.1	2410091N08Rik		ILMN_2587863	004610091	I	2433	AGCTGTGGGGGCAGGGCTCCAACACAAGCCAAAAGCCAAAAGCCAGGCAA										
Mus musculus	RefSeq	ILMN_219765	ILMN_219765	DBIL5	NM_021294.2	NM_021294.2		13168	83921598	NM_021294.2	Dbil5	NP_067269.1	ILMN_3162423	005220520	S	223	GCAGCTGAAGGGGCCTGTGAGTGATCAGGAGAAACTGCTGGTGTACAGCT	11	+	76031815-76031864	11qB5	Mus musculus diazepam binding inhibitor-like 5 (Dbil5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]	ELP	ELP
Mus musculus	RefSeq	ILMN_215776	ILMN_258125	OLFR652	NM_147048.1	NM_147048.1		259050	22128858	NM_147048.1	Olfr652	NP_667259.1	ILMN_1233010	003120088	S	651	CTTGATTGGCATCTCCTACACTGTTATTCTTCGTGCTGTCTTTAACCTTC	7	+	111713387-111713436	7qE3	Mus musculus olfactory receptor 652 (Olfr652), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR31-8	MOR31-8
Mus musculus	RefSeq	ILMN_220506	ILMN_220506	IMPG1	NM_022016.2	NM_022016.2		63859	133922563	NM_022016.2	Impg1	NP_071299.2	ILMN_2722939	004490524	S	2903	GTACAATATTGAGGATCTGATTCTTTTATATGTTAGAATATACAGTTAAA				9qE1	Mus musculus interphotoreceptor matrix proteoglycan 1 (Impg1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IMP150; A930015H12Rik; SPACR	IMP150; A930015H12Rik; SPACR
Mus musculus	RefSeq	ILMN_210716	ILMN_210716	CBY1	NM_028634.3	NM_028634.3		73739	118130505	NM_028634.3	Cby1	NP_082910.1	ILMN_1215039	003170338	S	469	CCCACCTAAAGGACAAAGAGCTGGATGAACTGAAGGTTACCAACCGCAGG	15	+	79497440-79497489	15qE1	Mus musculus chibby homolog 1 (Drosophila) (Cby1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]		Pgea1; arb1; PGEA14; 1110014P06Rik; CBY	Pgea1; arb1; PGEA14; 1110014P06Rik; CBY
Mus musculus	RefSeq	ILMN_210716	ILMN_210716	CBY1	NM_028634.3	NM_028634.3		73739	118130505	NM_028634.3	Cby1	NP_082910.1	ILMN_2760937	005080603	S	371	CCTGCGCAAACGAAACCAACAGTTAGAAGAAGAAAACAATCTCCTGCGGC	15	+	79496304-79496353	15qE1	Mus musculus chibby homolog 1 (Drosophila) (Cby1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]		Pgea1; arb1; PGEA14; 1110014P06Rik; CBY	Pgea1; arb1; PGEA14; 1110014P06Rik; CBY
Mus musculus	RefSeq	ILMN_220266	ILMN_220266	2510039O18RIK	NM_029841.2	NM_029841.2		77034	142365578	NM_029841.2	2510039O18Rik	NP_084117.1	ILMN_2719924	006590358	S	2231	TCAGTAAACAAACCCATAGGGAGCATACTTGAAGCTGAGCGCACCCCTCC	4	+	147320923-147320972	4qE2	Mus musculus RIKEN cDNA 2510039O18 gene (2510039O18Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200543	ILMN_200543	LOC384345	XM_357592.1	XM_357592.1			38083520	XM_357592.1	LOC384345		ILMN_1234209	005260368	S	469	AGTGGCCCCAAGATGCCCTCATCTGAGAACTTCTCGCAAGCTTATGCACC										
Mus musculus	MEEBO	ILMN_185635	ILMN_185635	IQCA	scl16487.8.1_9						Iqca		ILMN_2428714	000510672	S	3	GCACATTCCCAGACTACCCCAATGAGGAAGACGGAGGTTCAGCTCTCATC								Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196608	ILMN_196608	GRIA1	NM_008165.2	NM_008165.2		14799	34328127	NM_008165.2	Gria1	NP_032191.2	ILMN_2648006	004830670	S	2620	CAATCCATCAATGAAGCCATACGGACATCGACCCTCCCCAGGAACAGCGG	11	+	57140966-57141015	11qB1.3	Mus musculus glutamate receptor, ionotropic, AMPA1 (alpha 1) (Gria1), mRNA.	An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus [goid 32281] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process by which cell surface receptors are monoubiquitinated following ligand-induced activation, and subsequently taken up into endocytic vesicles and targeted to the lysosome or vacuole for degradation; serves as a mechanism to downregulate receptor signaling [goid 31623] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]	2900051M01Rik; GluR-A; GluRA; Glur1; Glr-1; Glr1; HIPA1; AI853806; Glur-1	2900051M01Rik; GluR-A; GluRA; Glur1; Glr-1; Glr1; HIPA1; AI853806; Glur-1
Mus musculus	RefSeq	ILMN_196608	ILMN_196608	GRIA1	NM_008165.2	NM_008165.2		14799	34328127	NM_008165.2	Gria1	NP_032191.2	ILMN_1248802	006370474	S	2535	GGCCATGCTGGTTGCCTTAATCGAGTTCTGCTACAAATCCCGTAGCGAGT	11	+	57131239-57131288	11qB1.3	Mus musculus glutamate receptor, ionotropic, AMPA1 (alpha 1) (Gria1), mRNA.	An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus [goid 32281] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process by which cell surface receptors are monoubiquitinated following ligand-induced activation, and subsequently taken up into endocytic vesicles and targeted to the lysosome or vacuole for degradation; serves as a mechanism to downregulate receptor signaling [goid 31623] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]	2900051M01Rik; GluR-A; GluRA; Glur1; Glr-1; Glr1; HIPA1; AI853806; Glur-1	2900051M01Rik; GluR-A; GluRA; Glur1; Glr-1; Glr1; HIPA1; AI853806; Glur-1
Mus musculus	RefSeq	ILMN_196608	ILMN_196608	GRIA1	NM_008165.2	NM_008165.2		14799	34328127	NM_008165.2	Gria1	NP_032191.2	ILMN_1221295	004210703	S	4989	GGGTCCATGACTCCGGGGAAGACGCTTCTCAACGAGGGATGTGTGGAAAG	11	+	57143335-57143384	11qB1.3	Mus musculus glutamate receptor, ionotropic, AMPA1 (alpha 1) (Gria1), mRNA.	An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus [goid 32281] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process by which cell surface receptors are monoubiquitinated following ligand-induced activation, and subsequently taken up into endocytic vesicles and targeted to the lysosome or vacuole for degradation; serves as a mechanism to downregulate receptor signaling [goid 31623] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]	2900051M01Rik; GluR-A; GluRA; Glur1; Glr-1; Glr1; HIPA1; AI853806; Glur-1	2900051M01Rik; GluR-A; GluRA; Glur1; Glr-1; Glr1; HIPA1; AI853806; Glur-1
Mus musculus	RefSeq	ILMN_196608	ILMN_196608	GRIA1	NM_008165.2	NM_008165.2		14799	34328127	NM_008165.2	Gria1	NP_032191.2	ILMN_2648012	003420484	S	2617	AGCAATCCATCAATGAAGCCATACGGACATCGACCCTCCCCAGGAACAGC	11	+	57140963-57141012	11qB1.3	Mus musculus glutamate receptor, ionotropic, AMPA1 (alpha 1) (Gria1), mRNA.	An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus [goid 32281] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process by which cell surface receptors are monoubiquitinated following ligand-induced activation, and subsequently taken up into endocytic vesicles and targeted to the lysosome or vacuole for degradation; serves as a mechanism to downregulate receptor signaling [goid 31623] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]	2900051M01Rik; GluR-A; GluRA; Glur1; Glr-1; Glr1; HIPA1; AI853806; Glur-1	2900051M01Rik; GluR-A; GluRA; Glur1; Glr-1; Glr1; HIPA1; AI853806; Glur-1
Mus musculus	RefSeq	ILMN_219995	ILMN_219995	EFNB2	NM_010111.4	NM_010111.4		13642	146134406	NM_010111.4	Efnb2	NP_034241.2	ILMN_2716212	004050670	S	3870	AGACAGTAATGGCTTTTCTTACCCAGATTGTGTACATAGAGCAATGTTGG				8qA1.1	Mus musculus ephrin B2 (Efnb2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the lymphatic vasculature over time, from its formation to the mature structure [goid 1945] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]	LERK-5; ELF-2; Epl5; Eplg5; NLERK-1; Lerk5; Htk-L	LERK-5; ELF-2; Epl5; Eplg5; NLERK-1; Lerk5; Htk-L
Mus musculus	MEEBO	ILMN_222345	ILMN_222345	D230040E23	scl36707.5.1_218	NM_177908.2			31342699	NM_177908.2	D230040E23		ILMN_1213372	001450594	S	2325	GGGGAGCTCTGATGCCCATCCCTAAGTGATTGGGAAGATTGAAGACACAC										
Mus musculus	MEEBO	ILMN_186990	ILMN_186990	ZFP472	scl50858.5_334				23346458	NM_153063	Zfp472		ILMN_1244492	007100056	S	12	GTGCAGGAGGATAATTTGGGTCTCCATGCTTTCTGTAAGATGGCAACCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197565	ILMN_245724	EG433604	XR_001597.1	XR_001597.1		433604	94369624	XR_001597.1	EG433604		ILMN_1219006	003440162	S	1522	TGCTTCGATGGATGAACAAGGCTTCTGCAAGATCGTCGGCCGATCAAAGG	3	+	65198740-65198789	3qE1	PREDICTED: Mus musculus predicted gene, EG433604 (EG433604), misc RNA.					
Mus musculus	RefSeq	ILMN_196858	ILMN_248299	EFR3B	NM_001082483.1	NM_001082483.1		668212	126723101	NM_001082483.1	Efr3b	NP_001075952.1	ILMN_1242217	004810195	S	2536	CTTTGAAATCACCATCCGGCCCCCTCCAAGCCCTTCAGGAACCATCAGCG	12	-	3966515-3966547:3967103-3967119	12qA1.1	Mus musculus EFR3 homolog B (S. cerevisiae) (Efr3b), mRNA. XM_001004477 XM_001004478 XM_001004480 XM_001004484 XM_001004487 XM_001004490 XM_994848 XM_994867 XM_994883 XM_994901				KIAA0953; mKIAA0953; AI852640	KIAA0953; mKIAA0953; AI852640
Mus musculus	RefSeq	ILMN_237300	ILMN_237300	OLFR3	NM_206903.1	NM_206903.1		18328	49170067	NM_206903.1	Olfr3	NP_996786.1	ILMN_3160521	004060487	S	543	GGGTGCCCTGCTTAAGTTGTCCTGTTCTGACACATCACTCAACCAACTGG	2	-	36668018-36668067	2qB	Mus musculus olfactory receptor 3 (Olfr3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Y71; MOR136-14	Y71; MOR136-14
Mus musculus	MEEBO	ILMN_215200	ILMN_215200	RYR3	scl00228479.1_148				47059154	NM_177652	Ryr3		ILMN_2656679	006580703	S	1493	GACAGAACAAAACTGTGTCTGAGTACTGGGACAGGTTTAGATGGGGAACC						Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules) [goid 30314] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_202120	ILMN_202120	2810451K12RIK	ri|2810451K12|ZX00067G21|AK013327|1433					AK013327	2810451K12Rik		ILMN_1220685	004850121	S	1092	TCCCCAGCAGGGAGTTTTCATTTGGTAACAGTTTCGGGAGCGGCTGTTGC										
Mus musculus	RefSeq	ILMN_201424	ILMN_201424	LOC385140	XM_358083.1	XM_358083.1			38093615	XM_358083.1	LOC385140		ILMN_1230228	004760491	S	449	GAGTGGTGCACTGTGACACCTCAGTGAAGCAACGTGACATCAGGGTGGAC										
Mus musculus	RefSeq	ILMN_189176	ILMN_315679	CTNND1	NM_001085448.1	NM_001085448.1		12388	146219834	NM_001085448.1	Ctnnd1	NP_001078917.1	ILMN_2673589	001850097	S	553	GAACGCGTCCGGGTCTCACCACAAGATGCCAACTCACTCATGGCCAATGG				2qD	Mus musculus catenin (cadherin associated protein), delta 1 (Ctnnd1), transcript variant 3, mRNA.	A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA409437; P120; AU019353; Ctnnd; Catns; mKIAA0384	AA409437; P120; AU019353; Ctnnd; Catns; mKIAA0384
Mus musculus	RefSeq	ILMN_209027	ILMN_209027	OLFR690	NM_020290.1	NM_020290.1		56860	9938013	NM_020290.1	Olfr690	NP_064686.1	ILMN_2591861	005260307	S	830	CCCACCATGTGCACATTCTTCTGGCAAATCTCTATGTGTTGGTTCCCCCC	7	-	112477843-112477892	7qE3	Mus musculus olfactory receptor 690 (Olfr690), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR31-2; Ors18	MOR31-2; Ors18
Mus musculus	RefSeq	ILMN_215188	ILMN_215188	KLRAQ1	NM_028658.3	NM_028658.3		73825	141803232	NM_028658.3	Klraq1	NP_082934.2	ILMN_2656543	002900646	S	2609	AAATTAGGATTTAATTTCAGTATGTAAGAACAACAAATATTTTGTATATT	17	+	88987318-88987367	17qE4	Mus musculus KLRAQ motif containing 1 (Klraq1), mRNA.				MGC117934; AI426045; 1110018J12Rik; AW550781	MGC117934; AI426045; 1110018J12Rik; AW550781
Mus musculus	RefSeq	ILMN_219260	ILMN_219260	HMGCS2	NM_008256.3	NM_008256.3		15360	142349549	NM_008256.3	Hmgcs2	NP_032282.2	ILMN_1216322	006280392	S	3215	TCCCCAAGAAGCCACCTGTGCACTTTGGCATGAATGTGTTCTATCCCTCA	3	+	98114586-98114635	3qF2.2	Mus musculus 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (Hmgcs2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + H2O + acetoacetyl-CoA = (S)-3-hydroxy-3-methylglutaryl-CoA + CoA [goid 4421] [evidence IEA]	1300002P16; mHS	1300002P16; mHS
Mus musculus	RefSeq	ILMN_196506	ILMN_196506	4930402K13RIK	XM_135594.5	XM_135594.5		75775	94407002	XM_135594.5	4930402K13Rik	XP_135594.3	ILMN_2767852	004760167	S	1446	GTGAGCTTCTGCCTCGCCTCCACATAATACATTACTGTATCAACCGTAGG	X	+	8683133-8683182	XqA1.1	PREDICTED: Mus musculus RIKEN cDNA 4930402K13 gene (4930402K13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210758	ILMN_210758	1700123J19RIK	XM_356401.5	XM_356401.5		73614	149271279	XM_356401.5	1700123J19Rik	XP_356401.5	ILMN_1237160	000510196	S	717	CCGCCTGGTGCTGAAGACTTCATTTTCATAACCGATTTTGAAGAGCCTTC				XqA3.3	PREDICTED: Mus musculus RIKEN cDNA 1700123J19 gene (1700123J19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210094	ILMN_210094	RPAP1	NM_177294.4	NM_177294.4		68925	144445948	NM_177294.4	Rpap1	NP_796268.2	ILMN_2704266	003420176	S	110	AGAGCCTGAGGTGCAATCTCTGGATTGGTCGTGTCGCCGATAGGCTGCGA	2	-	119612957-119613006	2qE5	Mus musculus RNA polymerase II associated protein 1 (Rpap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits [goid 30880] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	AU041788; A730023M06Rik; 1190005L06Rik; mKIAA1403; MGC144181; MGC144180; AW107702	AU041788; A730023M06Rik; 1190005L06Rik; mKIAA1403; MGC144181; MGC144180; AW107702
Mus musculus	RefSeq	ILMN_210094	ILMN_210094	RPAP1	NM_177294.4	NM_177294.4		68925	144445948	NM_177294.4	Rpap1	NP_796268.2	ILMN_2602151	006380113	S	4565	AGAACAGAAGGGACTCGTATTACATCATGATACTGGAGCTCAGGATCTGG	2	-	119589862-119589911	2qE5	Mus musculus RNA polymerase II associated protein 1 (Rpap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits [goid 30880] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	AU041788; A730023M06Rik; 1190005L06Rik; mKIAA1403; MGC144181; MGC144180; AW107702	AU041788; A730023M06Rik; 1190005L06Rik; mKIAA1403; MGC144181; MGC144180; AW107702
Mus musculus	MEEBO	ILMN_192354	ILMN_192354	SCL0002850.1_66	scl0002850.1_66						scl0002850.1_66		ILMN_1254611	003130767	S	17	AGAGCAGTCAGTGCTCTTACCTGCTGAGCCATCTCGCCAGCCTGGCTGCT										
Mus musculus	RefSeq	ILMN_223224	ILMN_223224	SLC25A33	NM_027460.2	NM_027460.2		70556	117647274	NM_027460.2	Slc25a33	NP_081736.2	ILMN_2761046	004180088	S	923	GGCAGCTGCTGCTGTTTCTAAGGGATGTGCCTCCTGCATCGCTTACCCAC	4	-	149123160-149123209	4qE2	Mus musculus solute carrier family 25, member 33 (Slc25a33), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5730438N18Rik; MGC4399	5730438N18Rik; MGC4399
Mus musculus	RefSeq	ILMN_225236	ILMN_225236	RRM2	NM_009104.1	NM_009104.1		20135	7106398	NM_009104.1	Rrm2	NP_033130.1	ILMN_2819319	005560646	S	1859	ACGGAATTCACAAGTGAGTTTGAGCCCAGTGGTGGGTACACCCGTGGGAC	12	+	25390611-25390660	12qA1.3	Mus musculus ribonucleotide reductase M2 (Rrm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose sugar esterified with diphosphate on its glycose moiety [goid 9186] [evidence IEA]; The chemical reactions and pathways involving a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9262] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IPI]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IPI]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IPI]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]	MGC113712; R2; AA407299	MGC113712; R2; AA407299
Mus musculus	RefSeq	ILMN_218106	ILMN_247576	2010001J22RIK	NM_001013022.1	NM_001013022.1		70113	61316403	NM_001013022.1	2010001J22Rik	NP_001013040.1	ILMN_1251371	001410259	S	630	GTGCCTACCACGTAGTGAATCCTATGATCTACAAGACTCGAGCCCCGCAG	15	-	89208240-89208289	15qE3	Mus musculus RIKEN cDNA 2010001J22 gene (2010001J22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218106	ILMN_247576	2010001J22RIK	NM_001013022.1	NM_001013022.1		70113	61316403	NM_001013022.1	2010001J22Rik	NP_001013040.1	ILMN_2759088	001260538	S	980	CTGATGCCTGCAAGCACGCGCGCACAGGCTCTGGGTTGTTTACTTAAAGC	15	-	89207890-89207939	15qE3	Mus musculus RIKEN cDNA 2010001J22 gene (2010001J22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221555	ILMN_239541	SMOK2A	XM_907097.2	XM_907097.2		27263	94411042	XM_907097.2	Smok2a	XP_912190.1	ILMN_2737143	002570286	S	1509	GGACTAGCAAGATAGGAAATGCGATGAGGAAGCTCTGTTGCTGTATCCCA				17qA1	PREDICTED: Mus musculus sperm motility kinase 2A (Smok2a), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211569	ILMN_211569	MOV10L1	NM_031260.2	NM_031260.2		83456	146219838	NM_031260.2	Mov10l1	NP_112550.2	ILMN_2617219	005220632	S	3634	CAATGGTGTCTACACAGGGTGTGATCTGCCTCCTGAACTCCAGGCTCTCC				15qE3	Mus musculus Moloney leukemia virus 10-like 1 (Mov10l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IDA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	CHAMP; Csm	CHAMP; Csm
Mus musculus	RefSeq	ILMN_200683	ILMN_200683	LOC384478	XM_357666.1	XM_357666.1			38085120	XM_357666.1	LOC384478		ILMN_1249659	004050739	S	253	AACTTGGTGAAGGCCAAAGGAAATCAAGTACCCACAAAGTCCCCAGAGAC										
Mus musculus	MEEBO	ILMN_192210	ILMN_192210	1110057P08RIK	scl1151.1.1_227						1110057P08Rik		ILMN_2486010	006280678	S	6	GTGAGGAATAATAAGTGAAATACAACATGCCCATCATATTCCTCTTCTCC						A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_190161	ILMN_231490	GNAS	NM_001077510.1	NM_001077510.1		14683	117959927	NM_001077510.1	Gnas	NP_001070978.1	ILMN_1223437	007160343	S	214	CTCGGCAACAGTAAGACCGAGGACCAGCGCAACGAGGAGAAGGCGCAGCG	2	+	174155806-174155855	2qH4	Mus musculus GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus (Gnas), transcript variant 8, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS];  [goid 6112] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1
Mus musculus	RefSeq	ILMN_214192	ILMN_245502	H60A	NM_010400.2	NM_010400.2		15101	142350027	NM_010400.2	H60a	NP_034530.1	ILMN_2645333	002480682	S	242	GATTCTGAGCCTTTTCATTCTGCTGAGCTATCTGGGGACCATACTGGCAG					Mus musculus histocompatibility 60a (H60a), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	Any process that stimulates, induces or increases the rate of macrophage activation [goid 43032] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of an immune response to tumor cell [goid 2839] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; The process of causing a cell to become susceptible to natural killer cell mediated cytotoxicity [goid 42271] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer cell activation [goid 32816] [evidence IDA]; The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [evidence IPI]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197807	ILMN_197807	LOC270491	XM_194577.3	XM_194577.3			38078339	XM_194577.3	LOC270491		ILMN_2529432	006550221	S	520	GCACTGACTGTGGCTTCCCTGAGGAGGCAGACTGCTGAGTACATGCAAAG										
Mus musculus	RefSeq	ILMN_210275	ILMN_210275	STK17B	NM_133810.2	NM_133810.2		98267	31559987	NM_133810.2	Stk17b	NP_598571.2	ILMN_1255834	006270091	S	3073	CTACCAGGTTGTAAACTCCCATACCTTTCCTTGGGACATTGCTTATTGTA	1	-	53812448-53812497	1qC1.1	Mus musculus serine/threonine kinase 17b (apoptosis-inducing) (Stk17b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Drak2; 3110009A03Rik; AI120141	Drak2; 3110009A03Rik; AI120141
Mus musculus	RefSeq	ILMN_201055	ILMN_201055	LOC381973	XM_356007.1	XM_356007.1			38088296	XM_356007.1	LOC381973		ILMN_2540921	003390685	S	120	CTGTGCAGGGATCTTCATGCTGTGCTTAGGTGACAACCCTGGGACTCCAG										
Mus musculus	RefSeq	ILMN_209964	ILMN_309971	LOC100045044	XM_001473570.1	XM_001473570.1		100045044	149261558	XM_001473570.1	LOC100045044	XP_001473620.1	ILMN_2600900	007550735	S	1125	TTCCCACAGACACCGCCTCATACTCACCTTGAGGATGGCCAGCAGGCAAG					PREDICTED: Mus musculus similar to membrane-associated ring finger (C3HC4) 9 (LOC100045044), mRNA.					
Mus musculus	RefSeq	ILMN_199625	ILMN_225647	SCRT2	XM_619828.4	XM_619828.4		545474	149250060	XM_619828.4	Scrt2	XP_619828.4	ILMN_1243552	001260053	S	1762	CGCCAGTGCGACAAGAGCTTCGCGCTCAAGTCCTACCTCCACAAGCACTG	2	+	151919493-151919542	2qG3	PREDICTED: Mus musculus scratch homolog 2, zinc finger protein (Drosophila) (Scrt2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_207284	ILMN_225647	SCRT2	XM_619828.4	XM_619828.4		545474	149250060	XM_619828.4	Scrt2	XP_619828.4	ILMN_1234496	006420647	S	3479	TCCCCCTAGCCACAAAAGAGGGTGGAGATTGCAGACCGCTCCAGGTTGCT	2	+	151921210-151921259	2qG3	PREDICTED: Mus musculus scratch homolog 2, zinc finger protein (Drosophila) (Scrt2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220253	ILMN_220253	BC003331	NM_145511.2	NM_145511.2		226499	116805314	NM_145511.2	BC003331	NP_663486.2	ILMN_3021807	002510685	I	1008	GACTTACACGCTGGGCCAAGCAAATAGAAAATGGTGTTTATCTGATTAAT	1	-	152228670-152228719	1qG1	Mus musculus cDNA sequence BC003331 (BC003331), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC7150	MGC7150
Mus musculus	RefSeq	ILMN_199387	ILMN_199387	OLFR1214	NM_146897.2	NM_146897.2		258899	121583724	NM_146897.2	Olfr1214	NP_667108.2	ILMN_2772427	004890021	S	750	TGTTTCCTGTATATTAATATATGCACGGCCCACATCTGCATTTTCCTTTG	2	-	88827558-88827607	2qE1	Mus musculus olfactory receptor 1214 (Olfr1214), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR233-8	MOR233-8
Mus musculus	RefSeq	ILMN_211526	ILMN_332081	PRSS12	NM_008939.1	NM_008939.1		19142	6679484	NM_008939.1	Prss12	NP_032965.1	ILMN_2616682	004610446	S	1856	TCGGCCCATGGAGACGGCAGGCTGCTTTGTGGAGCTACCCTTCTGAGTAG	3	+	123194455-123194504	3qG1	Mus musculus protease, serine, 12 neurotrypsin (motopsin) (Prss12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	motopsin; Bssp-3	motopsin; Bssp-3
Mus musculus	RefSeq	ILMN_211526	ILMN_332081	PRSS12	NM_008939.1	NM_008939.1		19142	6679484	NM_008939.1	Prss12	NP_032965.1	ILMN_1257088	004210204	S	2252	GCTGCTGTGCCTCTGTTACCCAAGAGGTTTTGTAAAGAGAGGTACAAGGG	3	+	123209165-123209214	3qG1	Mus musculus protease, serine, 12 neurotrypsin (motopsin) (Prss12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	motopsin; Bssp-3	motopsin; Bssp-3
Mus musculus	RefSeq	ILMN_218636	ILMN_218636	SAPS3	NM_029456.1	NM_029456.1		52036	22726196	NM_029456.1	Saps3	NP_083732.1	ILMN_1235583	006290706	S	4746	CATTTCTGTGTATTGGCCGAATGAATTGCAAGACTAACAGACGTCTACAG	19	-	3454973-3455022	19qA	Mus musculus SAPS domain family, member 3 (Saps3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [evidence ISA]	Interacting selectively with any protein phosphatase [goid 19903] [evidence ISA]	D19Ertd703e; D19Bwg1430e; mKIAA1558; Pp6r3; 4930528G08Rik; Sapl; 9130026N02Rik	D19Ertd703e; D19Bwg1430e; mKIAA1558; Pp6r3; 4930528G08Rik; Sapl; 9130026N02Rik
Mus musculus	RefSeq	ILMN_218636	ILMN_218636	SAPS3	NM_029456.1	NM_029456.1		52036	22726196	NM_029456.1	Saps3	NP_083732.1	ILMN_2698353	000460113	S	4602	CTGGGAAAGGAACGCTTGGGTACTGTTCTTGGGAAAGGACTTAGGCTTGC	19	-	3455117-3455166	19qA	Mus musculus SAPS domain family, member 3 (Saps3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [evidence ISA]	Interacting selectively with any protein phosphatase [goid 19903] [evidence ISA]	D19Ertd703e; D19Bwg1430e; mKIAA1558; Pp6r3; 4930528G08Rik; Sapl; 9130026N02Rik	D19Ertd703e; D19Bwg1430e; mKIAA1558; Pp6r3; 4930528G08Rik; Sapl; 9130026N02Rik
Mus musculus	RefSeq	ILMN_197223	ILMN_197223	LOC332579	XM_285326.2	XM_285326.2			38074664	XM_285326.2	LOC332579		ILMN_1247738	003830672	S	1695	CAGGAACTCCCAGGAGGATCTGGAGGAGGATGCCCAGCTCTCAGACAAAG										
Mus musculus	RefSeq	ILMN_224753	ILMN_224753	LOC433479	NM_001013802.1	NM_001013802.1		433479	85701489	NM_001013802.1	LOC433479	NP_001013824.1	ILMN_3161757	002760408	S	3504	GGTACTCACTGCAGACTAGACAAAGGGGCTTTTCCTCTTCCTGGTAACTA	2	+	142083756-142083805		Mus musculus similar to CG5965-PA (LOC433479), mRNA.					
Mus musculus	RefSeq	ILMN_217866	ILMN_217866	RRAS2	NM_025846.1	NM_025846.1		66922	13399307	NM_025846.1	Rras2	NP_080122.1	ILMN_2909782	004230142	S	2196	CAACAGCCCCATTGAAGTTTATAAAGTGGACCCTTGTATAGCTTCAGGTG	7	-	121190325-121190374	7qF1	Mus musculus related RAS viral (r-ras) oncogene homolog 2 (Rras2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IDA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IPI]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IGI]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C86394; 2610016H24Rik; TC21	C86394; 2610016H24Rik; TC21
Mus musculus	MEEBO	ILMN_192552	ILMN_192552	BECN1	scl39537.10_46				27764874	NM_019584	Becn1		ILMN_2489136	004120026	S	7	CTCACCTGGGATTAAAACTTGTACCTTGTGTCTTCAGTGGCTGATAGGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISS]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IDA]; Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation [goid 16239] [evidence IGI]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IDA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_224063	ILMN_230697	ROPN1L	NM_145852.2	NM_145852.2		252967	118150640	NM_145852.2	Ropn1l	NP_665851.2	ILMN_2773964	000380392	S	772	CGGACTTCTTCGTTGGAAAAAAGATAATATAGAAAGCCTTGAAGAGAAAG	15	-	31371053-31371071:31371072-31371102	15qB2	Mus musculus ropporin 1-like (Ropn1l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ASP; Akapasp; AV047578	ASP; Akapasp; AV047578
Mus musculus	MEEBO	ILMN_216418	ILMN_216418	1700096C12RIK	scl0067521.1_15	NM_026216.1			19920326	NM_026216.1	1700096C12Rik		ILMN_2670906	001740647	S	574	GATTGCCTTGATGGTAACTCTTGGTATCCCCCTGCCAACCAAGGTCGCAC										
Mus musculus	RefSeq	ILMN_217045	ILMN_217045	PWP1	NM_133993.2	NM_133993.2		103136	142386883	NM_133993.2	Pwp1	NP_598754.1	ILMN_2678502	006760561	S	2368	CCCATAAAGCCTTCTGGACTTAAGAGGTCCTAAATTAGCAATCTCACACC	10	+	85351671-85351720	10qC1	Mus musculus PWP1 homolog (S. cerevisiae) (Pwp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AI098170; 2310058A11Rik; AV083409; AL022879; AW550690; 2610205J09Rik	AI098170; 2310058A11Rik; AV083409; AL022879; AW550690; 2610205J09Rik
Mus musculus	MEEBO	ILMN_188145	ILMN_188145	RAP2B	scl22112.1.2604_19				31543576	NM_028712	Rap2b		ILMN_2627280	007560270	S	3657	GCTCAGAAAATACTTGAAGGTGGACAGTGATTTAGATTGTTGGTGCATTA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199712	ILMN_319169	LOC668160	XR_034000.1	XR_034000.1		668160	149265626	XR_034000.1	LOC668160		ILMN_1215034	001400097	S	3	GGGTACTGGGCAACTCTGCCTCGAGGAGGAAAATCAACTAAACACAGGCA	14	-	58668659-58668708	14qC3	PREDICTED: Mus musculus similar to High mobility group box 1 (LOC668160), misc RNA.					
Mus musculus	RefSeq	ILMN_219529	ILMN_219529	SKINT9	NM_177864.2	NM_177864.2		329918	31342817	NM_177864.2	Skint9	NP_808532.1	ILMN_2979289	006770639	S	819	GGACCCTGAACTGTTATGGTCAGGTGTCTTCCTTACCTCCAACAAGTATG	4	-	112059077-112059116:112061762-112061771	4qD1	Mus musculus selection and upkeep of intraepithelial T cells 9 (Skint9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_188261	ILMN_188261	YWHAZ	NM_011740.2	NM_011740.2		22631	31981422	NM_011740.2	Ywhaz	NP_035870.1	ILMN_2510612	004120370	S	2078	CTCTACAGCTTTTCATGTAAATTAGTCTTTTGGTTTTGAGACTTCTCCAA	15	-	36701391-36701440	15qB3.1	Mus musculus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (Ywhaz), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]	1110013I11Rik; AL022924; AU020854; AI596267	1110013I11Rik; AL022924; AU020854; AI596267
Mus musculus	RefSeq	ILMN_188261	ILMN_188261	YWHAZ	NM_011740.2	NM_011740.2		22631	31981422	NM_011740.2	Ywhaz	NP_035870.1	ILMN_2952914	002510722	S	2907	GTAAGCTCGTCTAGAGCAGGGACAATGTTTTCTGTATGTTCTATTGTGCC	15	-	36700562-36700611	15qB3.1	Mus musculus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (Ywhaz), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]	1110013I11Rik; AL022924; AU020854; AI596267	1110013I11Rik; AL022924; AU020854; AI596267
Mus musculus	RefSeq	ILMN_218390	ILMN_218390	MED1	NM_134027.2	NM_134027.2		19014	121583905	NM_134027.2	Med1	NP_598788.2	ILMN_1220563	000620154	S	2431	CACTGGTCCCAGCAGATGTCAGTATACAAAACATAATCAATCCCTGGGCA	11	-	98024101-98024125:98025114-98025138	11qD	Mus musculus mediator complex subunit 1 (Med1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The formation of either of the compounds secreted by the thyroid gland, mainly thyroxine and triiodothyronine. This is achieved by the iodination and joining of tyrosine molecules to form the precursor thyroglobin, proteolysis of this precursor gives rise to the thyroid hormones [goid 6590] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IC ]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IPI]	MGC90617; MED1; CRSP210; TRAP220; PBP; Pparbp; DRIP205; AI480703	MGC90617; MED1; CRSP210; TRAP220; PBP; Pparbp; DRIP205; AI480703
Mus musculus	RefSeq	ILMN_218390	ILMN_218390	MED1	NM_134027.2	NM_134027.2		19014	121583905	NM_134027.2	Med1	NP_598788.2	ILMN_2695175	005360717	S	2223	AATCTGCTCTGATGTACAAGAATATTTCAGTGTATCTTAAAACAAGTGTT	11	-	98025297-98025315:98025858-98025888	11qD	Mus musculus mediator complex subunit 1 (Med1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The formation of either of the compounds secreted by the thyroid gland, mainly thyroxine and triiodothyronine. This is achieved by the iodination and joining of tyrosine molecules to form the precursor thyroglobin, proteolysis of this precursor gives rise to the thyroid hormones [goid 6590] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IC ]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IPI]	MGC90617; MED1; CRSP210; TRAP220; PBP; Pparbp; DRIP205; AI480703	MGC90617; MED1; CRSP210; TRAP220; PBP; Pparbp; DRIP205; AI480703
Mus musculus	Riken	ILMN_204880	ILMN_204880	A430075K18RIK	ri|A430075K18|PX00138M07|AK040192|4310					AK040192	A430075K18Rik		ILMN_1250967	005090364	S	1540	GCCCTGGAGAGAACTCTGAAGAGGCTGCTATCCTGTGCAGCCAGGTGCTT										
Mus musculus	MEEBO	ILMN_211161	ILMN_211161	E130112L23RIK	scl46353.10.4_31	NM_198249.1			38016193	NM_198249.1	E130112L23Rik		ILMN_2613156	000770673	S	2034	CTTAGGAGGTCACAGGGACCTCTCCCCCAACCACTGGGCAGAGATACATC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198873	ILMN_198873	LOC244435	XM_146301.2	XM_146301.2			38089208	XM_146301.2	LOC244435		ILMN_1233417	006250132	S	214	GGACTCCAAGCAAACTTAGTGACTCCAATCAAGCACGGCCGCCCCACAGG										
Mus musculus	RefSeq	ILMN_209215	ILMN_257161	4921511K06RIK	XM_908853.2	XM_908853.2		232664	94377193	XM_908853.2	4921511K06Rik	XP_913946.1	ILMN_2593676	003140494	S	1319	AGTATGACGCTAGCCAGGACGAGCACAGTGAGCTTCTGAAGGTGCAGATG				6qA3.3	PREDICTED: Mus musculus RIKEN cDNA 4921511K06 gene, transcript variant 5 (4921511K06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209215	ILMN_257161	4921511K06RIK	XM_908853.2	XM_908853.2		232664	94377193	XM_908853.2	4921511K06Rik	XP_913946.1	ILMN_1249790	003180465	S	3583	CCGCAGGAATCAGAATACTACATGAAGTGATGGCAGACCTGGACCAGCCC				6qA3.3	PREDICTED: Mus musculus RIKEN cDNA 4921511K06 gene, transcript variant 5 (4921511K06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218518	ILMN_218518	STK10	NM_009288.2	NM_009288.2		20868	126362972	NM_009288.2	Stk10	NP_033314.2	ILMN_2703341	007610468	S	1707	TAAGACCCTGAAACGGACCCGCCGGTTTGTGGTGGATGGTGTGGAGGTGA	11	+	32500758-32500807	11qA4	Mus musculus serine/threonine kinase 10 (Stk10), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence TAS]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA4026; KIAA4026; Gek1; Lok	mKIAA4026; KIAA4026; Gek1; Lok
Mus musculus	RefSeq	ILMN_233870	ILMN_233870	UGT1A10	NM_201641.1	NM_201641.1		394430	47059120	NM_201641.1	Ugt1a10	NP_964003.1	ILMN_2930203	002350730	S	1480	CACTCCTTGGATGTGATTGGCTTCCTCCTGGCCATTGTGTTGACAGTGGA	1	+	90114856-90114905	1qD	Mus musculus UDP glycosyltransferase 1 family, polypeptide A10 (Ugt1a10), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Ugt1a13; MGC107546; A13	Ugt1a13; MGC107546; A13
Mus musculus	RefSeq	ILMN_211406	ILMN_211406	PHLDB1	NM_153537.3	NM_153537.3		102693	38455421	NM_153537.3	Phldb1	NP_705765.3	ILMN_2724371	007160021	S	5248	CTGTGGTAATCTCCCTTCAGTTTCCCAAAGGTGATGGGAAAGGAGAACGG	9	-	44494550-44494599	9qA5.2	Mus musculus pleckstrin homology-like domain, family B, member 1 (Phldb1), mRNA.				MGC32394; D330037A14Rik; AU041016; Ll5a	MGC32394; D330037A14Rik; AU041016; Ll5a
Mus musculus	RefSeq	ILMN_211406	ILMN_211406	PHLDB1	NM_153537.3	NM_153537.3		102693	38455421	NM_153537.3	Phldb1	NP_705765.3	ILMN_2620284	006960040	S	2871	ACTTAGAGCAGTGGTACCAGGAGTTGATGTCCGGGCTGGGGACTGGCCTT	9	-	44509091-44509140	9qA5.2	Mus musculus pleckstrin homology-like domain, family B, member 1 (Phldb1), mRNA.				MGC32394; D330037A14Rik; AU041016; Ll5a	MGC32394; D330037A14Rik; AU041016; Ll5a
Mus musculus	RefSeq	ILMN_211406	ILMN_211406	PHLDB1	NM_153537.3	NM_153537.3		102693	38455421	NM_153537.3	Phldb1	NP_705765.3	ILMN_2884126	000020288	S	5027	GCCCAGCCCCTCTCCCTTTTACTGTGCCTTGCTTAGAGCCAGAAGGGATG	9	-	44494771-44494820	9qA5.2	Mus musculus pleckstrin homology-like domain, family B, member 1 (Phldb1), mRNA.				MGC32394; D330037A14Rik; AU041016; Ll5a	MGC32394; D330037A14Rik; AU041016; Ll5a
Mus musculus	RefSeq	ILMN_211406	ILMN_211406	PHLDB1	NM_153537.3	NM_153537.3		102693	38455421	NM_153537.3	Phldb1	NP_705765.3	ILMN_2615534	004560753	S	13	TGAGGCCGCCGCGGCCCACTTGGGCAAAGGGGCCGGTGTCCCCCCAACTC	9	-	44543215-44543264	9qA5.2	Mus musculus pleckstrin homology-like domain, family B, member 1 (Phldb1), mRNA.				MGC32394; D330037A14Rik; AU041016; Ll5a	MGC32394; D330037A14Rik; AU041016; Ll5a
Mus musculus	RefSeq	ILMN_259159	ILMN_259159	KLF16	NM_078477.1	NM_078477.1		118445	17505215	NM_078477.1	Klf16	NP_510962.1	ILMN_2889916	002470070	S	2075	CTGCCCTGTGTTGGCTGTGGGGGGTTTACTGGCATTCCCATTTGTTCCAG	10	-	79970775-79970824	10qC1	Mus musculus Kruppel-like factor 16 (Klf16), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BTEB4; AI843742; DRRF	BTEB4; AI843742; DRRF
Mus musculus	MEEBO	ILMN_195241	ILMN_195241	A130038J17RIK	scl45268.2.964_222						A130038J17Rik		ILMN_2513781	003190224	S	19	GTGGACTGTTCTATATTTGCAGGAACTCTGGGCAAGGCTCGCTGTCTGTG										
Mus musculus	MEEBO	ILMN_187596	ILMN_187596	TMPRSS5	scl36983.14.1_161				13507651	NM_030709	Tmprss5		ILMN_2445483	000110609	S	14	GGTTGGACAAGCTCAGGTAAAGGCACGGAAGTCGAGATCCCCTCTCCCCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]		
Mus musculus	Riken	ILMN_202843	ILMN_202843	9030216K14RIK	ri|9030216K14|PX00060P23|AK033474|1567					AK033474	9030216K14Rik		ILMN_2552732	002480768	S	1477	ATCCTGACACCTCATAGCTGGTCTCCTGAAAACAATGTAATAGGAAGCCC										
Mus musculus	MEEBO	ILMN_184458	ILMN_184458	BRAF	scl29106.1.1482_3				51711918	XM_355754	Braf		ILMN_1246957	007040324	S	9	GTCCACCAGTCATTAACAGTCTGCTCCATATGAGACATACCAACATTCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5057] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184458	ILMN_184458	BRAF	scl29106.1.1482_3				51711918	XM_355754	Braf		ILMN_2435411	003990239	S	11	AACCAACTGATGCGCTGTCTTCGGAAATACCAATCCCGGACTCCCAGCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5057] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184458	ILMN_184458	BRAF	scl29106.1.1482_3				51711918	XM_355754	Braf		ILMN_1236089	002570039	S	2570	CTCCGAAAACACCCATCCAAGCAGGGGGATATGGTGGGTTTCCAGTCCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5057] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184458	ILMN_184458	BRAF	scl29106.1.1482_3				51711918	XM_355754	Braf		ILMN_1230798	001740605	S	1	CCTGTGTTAATGATCGGATTAGGAACTAGCAGAGTTGCCAACTACCCACA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5057] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199723	ILMN_199723	LOC383865	XM_357300.1	XM_357300.1			38076550	XM_357300.1	LOC383865		ILMN_1237657	001440092	S	1069	GCCGACATCAACAGCACATTGACTCGGGACTTCCAACCTTTCCCGCAAGC										
Mus musculus	Riken	ILMN_202995	ILMN_202995	IDE	ri|4732490D18|PX00052B04|AK029089|2372					AK029089	Ide		ILMN_1238102	005490129	S	2016	CTGACTTGATGGGTTGGTGAGAGTGCCTGGTGGTTAGAGGCACCTGCTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	Riken	ILMN_203034	ILMN_203034	WNT5A	ri|6720483L10|PX00060A22|AK032977|3194					AK032977	Wnt5a		ILMN_1245294	003420092	S	2852	CAATCCAAATGGCCCAAGTTGTCATCTTTTAGAACGCTGGCAATGCCGGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]		
Mus musculus	RefSeq	ILMN_252009	ILMN_252009	MTVR2	NM_023166.1	NM_023166.1		17826	12963546	NM_023166.1	Mtvr2	NP_075655.1	ILMN_3108203	005720538	A	227	CTGGAGCGTGTCTACAGCCAACGGAGCCGCATCCACGACGAACTGAGTCG	19	-	5729357-5729406	19qA	Mus musculus mammary tumor virus receptor 2 (Mtvr2), transcript variant 2, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MMTV; 1110021A21Rik	MMTV; 1110021A21Rik
Mus musculus	Riken	ILMN_206546	ILMN_206546	SOX5	ri|C130078G23|PX00171F01|AK081802|2472					AK081802	Sox5		ILMN_2580904	006200707	S	2417	AGCTTCCTGCAAGGCGAGCGAGGTTGGCTAGAGAGGGATTCTTTCTGGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IGI]; The process controlling the timing and/or rate at which a relatively unspecialized cell acquires features of a neuron [goid 60164] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197104	ILMN_197104	EG226654	XM_129558.5	XM_129558.5		226654	94364519	XM_129558.5	EG226654	XP_129558.3	ILMN_1243926	001170451	S	403	GCCGGGGCCTATAAAGAGTGGCTGGAGAAACAGGGCTAGATAAAAGGCTC	1	+	173350335-173350373:173350374-173350384	1qH3	PREDICTED: Mus musculus predicted gene, EG226654, transcript variant 1 (EG226654), mRNA.					
Mus musculus	RefSeq	ILMN_214177	ILMN_214177	EEF1A2	NM_007906.2	NM_007906.2		13628	31982852	NM_007906.2	Eef1a2	NP_031932.1	ILMN_2971559	001300601	S	1880	GCGCATGTCTGCACCTCCGCTTGTAAGAGGCTCTACGTCAGCGACTGGAT	2	-	180882513-180882562	2qH4	Mus musculus eukaryotic translation elongation factor 1 alpha 2 (Eef1a2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IDA]	S1; wst; wasted; Eef1a	S1; wst; wasted; Eef1a
Mus musculus	RefSeq	ILMN_214177	ILMN_214177	EEF1A2	NM_007906.2	NM_007906.2		13628	31982852	NM_007906.2	Eef1a2	NP_031932.1	ILMN_2666990	004810646	S	1987	CTTCCGCGCCAGCGCTCACCACGCTCAGTGCCCGTTTTCCCAATAAACTG	2	-	180882406-180882455	2qH4	Mus musculus eukaryotic translation elongation factor 1 alpha 2 (Eef1a2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IDA]	S1; wst; wasted; Eef1a	S1; wst; wasted; Eef1a
Mus musculus	RefSeq	ILMN_214177	ILMN_214177	EEF1A2	NM_007906.2	NM_007906.2		13628	31982852	NM_007906.2	Eef1a2	NP_031932.1	ILMN_2645171	003180086	S	529	TAAATATGCCTGGGTGCTGGACAAGCTGAAGGCCGAGCGGGAACGAGGCA	2	-	180888468-180888517	2qH4	Mus musculus eukaryotic translation elongation factor 1 alpha 2 (Eef1a2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IDA]	S1; wst; wasted; Eef1a	S1; wst; wasted; Eef1a
Mus musculus	MEEBO	ILMN_212896	ILMN_212896	9430041O17RIK	scl000556.1_47	NM_172752.2			27923934	NM_172752.2	9430041O17Rik		ILMN_1236413	002850356	S	1137	GAAGCCTCTCTCAGTGTCACCCTCAACAGATGGCCTGCGTAGCCCTTCCC										
Mus musculus	Riken	ILMN_204243	ILMN_204243	PGLS	ri|B130011H21|PX00156D18|AK044914|1288					AK044914	Pgls		ILMN_1250635	000730601	S	1196	GAGGCTGGAGGATCGGGAGTTCAAGGTCATTCCCAGCTACCCAGTTCGAG							The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate [goid 17057] [evidence IEA]		
Mus musculus	RefSeq	ILMN_261926	ILMN_261926	OLFR1186	NM_146530.1	NM_146530.1		258523	33239039	NM_146530.1	Olfr1186	NP_666741.1	ILMN_2936594	007000600	S	649	GTAATCTTATACTCTCTGAGAAGCCACAGTGCAGAAGGAAGACGAAAGGC	2	+	88366390-88366439	2qD	Mus musculus olfactory receptor 1186 (Olfr1186), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR230-5	MOR230-5
Mus musculus	MEEBO	ILMN_188129	ILMN_188129	2310011G17RIK	scl069604.4_12						2310011G17Rik		ILMN_1249219	000780482	S	13	GTTCTTACAGCTGGACAGAATGGTCATCTCAACTAGCTACCCAGTAGCAC										
Mus musculus	RefSeq	ILMN_218419	ILMN_218419	PSMG3	NM_025604.3	NM_025604.3		66506	146135053	NM_025604.3	Psmg3	NP_079880.1	ILMN_2695599	003130326	S	474	GCATTGAAGGAAGTGATCCGGCTGTGCCAGGTGTGGTGACCTGCCGTTAG				5qG2	Mus musculus proteasome (prosome, macropain) assembly chaperone 3 (Psmg3), mRNA.				AI303239; 4930403H09Rik	AI303239; 4930403H09Rik
Mus musculus	RefSeq	ILMN_218506	ILMN_236037	BCDO2	NM_133217.2	NM_133217.2		170752	118131019	NM_133217.2	Bcdo2	NP_573480.1	ILMN_2774486	005560056	S	1686	GTTGTAGTTTGGACCTGACCCTGACCCCTAAGGACTCATAGACCCGACTC	9	-	50341374-50341423	9qA5.3	Mus musculus beta-carotene 9', 10'-dioxygenase 2 (Bcdo2), mRNA.				B-diox-II; MGC129323; MGC129322; CMO2	B-diox-II; MGC129323; MGC129322; CMO2
Mus musculus	MEEBO	ILMN_186754	ILMN_186754	NPHP3	scl36533.8.1_27				50878276	NM_028721	Nphp3		ILMN_2765695	006220315	S	3221	AGATTTGATAAATATTGCCACATTTTAGATATTTGTTTTTATTTGTATAT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the identity of an organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized [goid 48496] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_186754	ILMN_186754	NPHP3	scl36533.8.1_27				50878276	NM_028721	Nphp3		ILMN_2438221	004200328	S	2	CGGTGTTGTCAGGATCTGCCTCACCAAGCTGGGCTTCAATGCCTGTTAGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the identity of an organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized [goid 48496] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212801	ILMN_212801	CEP27	NM_025475.2	NM_025475.2		66296	68299778	NM_025475.2	Cep27	NP_079751.1	ILMN_2630468	002630332	S	764	TCCGTTTCTAGATTGTTGTGACAGGGATATTGATAGTTTTTCTTGCTAGC	2	+	120444959-120445008	2qE5	Mus musculus centrosomal protein 27 (Cep27), mRNA.				1700101G24Rik; 2410007P03Rik; AU020217	1700101G24Rik; 2410007P03Rik; AU020217
Mus musculus	RefSeq	ILMN_224688	ILMN_224688	CATSPER3	NM_029772.1	NM_029772.1		76856	30350217	NM_029772.1	Catsper3	NP_084048.1	ILMN_2998446	001570736	S	1162	GTGAACGTGCTGAGCCTGATGTTGGAAGACATGCCCAAGGAGAGCTCGTC	13	+	55818471-55818520	13qB1	Mus musculus cation channel, sperm associated 3 (Catsper3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; Cell motility due to movement of cilia or flagella [goid 1539] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5227] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	MGC107210; CACRC; 4921522D01Rik	MGC107210; CACRC; 4921522D01Rik
Mus musculus	RefSeq	ILMN_222841	ILMN_222841	AVPI1	NM_027106.3	NM_027106.3		69534	146141124	NM_027106.3	Avpi1	NP_081382.1	ILMN_2755585	007040133	S	453	ACACGGCCTCCAGCGAGCAGTCTGGGAACTCCCGGAGAACAAGTGCTAGA				19qC3	Mus musculus arginine vasopressin-induced 1 (Avpi1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	VIT32; esu; AA410041; 2310008N12Rik; mVIT32	VIT32; esu; AA410041; 2310008N12Rik; mVIT32
Mus musculus	Riken	ILMN_202487	ILMN_202487	6530413F01RIK	ri|6530413F01|PX00048P11|AK018335|1691					AK018335	6530413F01Rik		ILMN_1218447	006900129	S	1582	CCACCTCGCCTGGGGTTGGCAAGCAGAACATCTCCATTAAGGCACACGAG										
Mus musculus	RefSeq	ILMN_222842	ILMN_222842	ZFP169	NM_026450.2	NM_026450.2		67911	40538822	NM_026450.2	Zfp169	NP_080726.2	ILMN_1244864	005810451	S	3973	GCTCTCTGTCCCCCAGGGCTAGAGGAGATGGCTAATTAACTCTGGTTCAC	13	-	48583150-48583199	13qA5	Mus musculus zinc finger protein 169 (Zfp169), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4930429A13Rik; 1700025J14Rik; BE688704	4930429A13Rik; 1700025J14Rik; BE688704
Mus musculus	RefSeq	ILMN_194573	ILMN_244432	C030032F19RIK	XM_987187.1	XM_987187.1		77389	94380757	XM_987187.1	C030032F19Rik	XP_992281.1	ILMN_1232417	001170670	S	360	GGGGTTGGGGAAAAGCCCAAGAAAGGAAAAGCTGGCTCAACCCCATTGAT					PREDICTED: Mus musculus RIKEN cDNA C030032F19 gene (C030032F19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197088	ILMN_197088	LOC236442	XM_142983.2	XM_142983.2			38073945	XM_142983.2	LOC236442		ILMN_2526870	006860035	S	241	GGTGACTGTAGACCGAGGGACCGAGAAGGACCAGTTCACTTCAAGCAAAA										
Mus musculus	RefSeq	ILMN_238924	ILMN_238924	RAB11FIP2	NM_001033172.1	NM_001033172.1		74998	75677517	NM_001033172.1	Rab11fip2	NP_001028344.1	ILMN_2933151	004040053	S	4038	CACCGCCCTGCCTCTGGGACTTCAAGTGTCATTCCTTAAACACCAAGGTC	19	-	59958753-59958802	19qD3	Mus musculus RAB11 family interacting protein 2 (class I) (Rab11fip2), mRNA.				Rab11-FIP2; 4930470G04Rik; A830046J09Rik; nRip11	Rab11-FIP2; 4930470G04Rik; A830046J09Rik; nRip11
Mus musculus	RefSeq	ILMN_216021	ILMN_216021	PRRC1	NM_028447.2	NM_028447.2		73137	110625810	NM_028447.2	Prrc1	NP_082723.2	ILMN_2666406	003370398	S	1538	ACCTTGGGCTCCATGCAGAGGAACCTGAGTGGCTTCCGTGAATCCAACAG	18	+	57549118-57549167	18qD3	Mus musculus proline-rich coiled-coil 1 (Prrc1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	1190002C06Rik; 9430085A19Rik; 2310058D16Rik; 3110038B19Rik	1190002C06Rik; 9430085A19Rik; 2310058D16Rik; 3110038B19Rik
Mus musculus	MEEBO	ILMN_219987	ILMN_219987	HSP105	scl25735.19_37	NM_013559.1			7305168	NM_013559.1	Hsp105		ILMN_2716098	003290270	S	3305	GGGAGACACACGTGTGGATCATGTGATCATTGTGAACACCTCGTGAGCTT										
Mus musculus	RefSeq	ILMN_210473	ILMN_210473	RAB19	NM_011226.1	NM_011226.1		19331	33859607	NM_011226.1	Rab19	NP_035356.1	ILMN_2942082	001440451	S	898	GCCCTGGAGGAAGAGGGCTAGGATGGATTCTCCTCATACTGATCTGTCTC	6	+	39339955-39340004	6qB1	Mus musculus RAB19, member RAS oncogene family (Rab19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210473	ILMN_210473	RAB19	NM_011226.1	NM_011226.1		19331	33859607	NM_011226.1	Rab19	NP_035356.1	ILMN_2605960	006380431	S	706	TGTGGCCCAGGTCCCCAATGAGAGCACCCGCTGTACTTGTTGAACATGTG	6	+	39339763-39339805:39339806-39339812	6qB1	Mus musculus RAB19, member RAS oncogene family (Rab19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_245593	ILMN_245593	LIPN	NM_027340.1	NM_027340.1		70166	124249207	NM_027340.1	Lipn	NP_081616.1	ILMN_2944988	002510187	S	1237	GTACCCACTGCCATTTGGGCTGGTGGACACGATGTGCTCGTAACTCCTCA				19qC1	Mus musculus lipase, family member N (Lipn), mRNA. XM_972783	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2210418G03Rik; Lipl4	2210418G03Rik; Lipl4
Mus musculus	RefSeq	ILMN_218623	ILMN_218623	ALS2CR12	NM_175370.3	NM_175370.3		108812	118129876	NM_175370.3	Als2cr12	NP_780579.1	ILMN_2698213	000150025	S	1490	CAATGGATAGAAATATTTGAATTCTTATCCTAATTATATCTTGGCTCTCC	1	-	58714968-58715017	1qC1.3	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human) (Als2cr12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			4933425F06Rik; 4933405P16Rik	4933425F06Rik; 4933405P16Rik
Mus musculus	RefSeq	ILMN_195017	ILMN_247488	NOL5	NM_018868.2	NM_018868.2		55989	120407049	NM_018868.2	Nol5	NP_061356.2	ILMN_1235979	006980722	S	1446	GAAGTGAAGACTTACGATCCCTCTGGTGACTCCACACTTCCAACTTGTTC	1	+	59765848-59765897	1qC1.3	Mus musculus nucleolar protein 5 (Nol5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IC ]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with a protein constituent of a small nucleolar ribonucleoprotein particle [goid 30519] [evidence ISO]	MSSP; SIK; MGC105209	MSSP; SIK; MGC105209
Mus musculus	RefSeq	ILMN_227734	ILMN_227734	F13A1	NM_028784.2	NM_028784.2		74145	30578392	NM_028784.2	F13a1	NP_083060.2	ILMN_2914938	006960451	S	3348	GGCCAGCGTTACTCTTGACTGAAGGACAGAGGGCACCCAAATCCTTTACC	13	-	36959517-36959566	13qA3.3	Mus musculus coagulation factor XIII, A1 subunit (F13a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IMP]	1200014I03Rik; AI462306; F13a	1200014I03Rik; AI462306; F13a
Mus musculus	Riken	ILMN_203322	ILMN_203322	NKTR	ri|E430002O08|PX00096I24|AK088056|2421					AK088056	Nktr		ILMN_1216740	004050445	S	2296	GGTGTGGTGTGGTGCACGCCTTTAAATCTAACACGTGGGAAGCAGAGGCG							The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]		
Mus musculus	RefSeq	ILMN_205282	ILMN_237985	ZFP607	NM_001024726.2	NM_001024726.2		545938	110625612	NM_001024726.2	Zfp607	NP_001019897.2	ILMN_1217583	000010053	S	2894	CTGAGGACTGGGGCTAATTAGCAGAGCCTTTTGGTTCCTGCTGGATGGGC	7	+	28665227-28665276	7qA3	Mus musculus zinc finger proten 607 (Zfp607), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4732475C15Rik	4732475C15Rik
Mus musculus	RefSeq	ILMN_237985	ILMN_237985	ZFP607	NM_001024726.2	NM_001024726.2		545938	110625612	NM_001024726.2	Zfp607	NP_001019897.2	ILMN_2914036	007560039	S	3157	TGAAAATTCTAAGGTGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACT	7	+	28665490-28665539	7qA3	Mus musculus zinc finger proten 607 (Zfp607), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4732475C15Rik	4732475C15Rik
Mus musculus	RefSeq	ILMN_190567	ILMN_224946	SCRN1	NM_027268.2	NM_027268.2		69938	142375297	NM_027268.2	Scrn1	NP_081544.1	ILMN_1240987	006980100	S	1545	GTAACGCGATCCCATTTGCCTCTTGCTCCATTGTGTGATAAGCTATGGGC	6	-	54458992-54459041	6qB3	Mus musculus secernin 1 (Scrn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]	AI852905; SES1; mKIAA0193; KIAA0193; 6330535A03Rik; 2810019K23Rik	AI852905; SES1; mKIAA0193; KIAA0193; 6330535A03Rik; 2810019K23Rik
Mus musculus	RefSeq	ILMN_199763	ILMN_229667	EG433633	XM_485288.3	XM_485288.3		433633	82890768	XM_485288.3	EG433633	XP_485288.1	ILMN_1233637	007610435	S	129	AGCCTTCCAGCCGTGCAATAACCTGTTTGAGCCCATTACTGTGCACTCCC	3	-	102193764-102193813	3qF2.2	PREDICTED: Mus musculus predicted gene, EG433633 (EG433633), mRNA.					
Mus musculus	RefSeq	ILMN_218352	ILMN_218352	BC003993	NM_030560.3	NM_030560.3		80744	141801912	NM_030560.3	BC003993	NP_085037.2	ILMN_2746328	004640768	S	146	AGCACGTGTCACTTGAATGAACCTGAAGAATCTGGGGCAGCTGACAGCAG	2	-	77774679-77774728	2qC3	Mus musculus cDNA sequence BC003993 (BC003993), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC107219; B230213M24; MGC7531; mKIAA1604; RP23-65N20.1; AL022752; AI173004; AA684037; MGC107450	MGC107219; B230213M24; MGC7531; mKIAA1604; RP23-65N20.1; AL022752; AI173004; AA684037; MGC107450
Mus musculus	RefSeq	ILMN_218352	ILMN_218352	BC003993	NM_030560.3	NM_030560.3		80744	141801912	NM_030560.3	BC003993	NP_085037.2	ILMN_1241086	005080152	S	3185	AAATATTTTTCTTTGTGTCAGTTTCTATGAATTACCATAATTATTAGTGG	2	-	77733754-77733803	2qC3	Mus musculus cDNA sequence BC003993 (BC003993), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC107219; B230213M24; MGC7531; mKIAA1604; RP23-65N20.1; AL022752; AI173004; AA684037; MGC107450	MGC107219; B230213M24; MGC7531; mKIAA1604; RP23-65N20.1; AL022752; AI173004; AA684037; MGC107450
Mus musculus	RefSeq	ILMN_218352	ILMN_218352	BC003993	NM_030560.3	NM_030560.3		80744	141801912	NM_030560.3	BC003993	NP_085037.2	ILMN_2744789	007380167	S	311	CCCCCCGGGATAGAGGTTACTCTGATTACAGCCGGTCAGACTATGAGCGA	2	-	77769532-77769581	2qC3	Mus musculus cDNA sequence BC003993 (BC003993), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC107219; B230213M24; MGC7531; mKIAA1604; RP23-65N20.1; AL022752; AI173004; AA684037; MGC107450	MGC107219; B230213M24; MGC7531; mKIAA1604; RP23-65N20.1; AL022752; AI173004; AA684037; MGC107450
Mus musculus	RefSeq	ILMN_218027	ILMN_218027	SEZ6	NM_021286.3	NM_021286.3		20370	118130194	NM_021286.3	Sez6	NP_067261.2	ILMN_1224996	007560025	S	3553	TGGCGTGCCAACACCAGCCCCTCAGGGAGGTTTCTAGTCCCTCTCTAAAG	11	+	77792007-77792056	11qB5	Mus musculus seizure related gene 6 (Sez6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			sez-6; mKIAA4158; BSRP-C; KIAA4158; D11Bhm177e	sez-6; mKIAA4158; BSRP-C; KIAA4158; D11Bhm177e
Mus musculus	MEEBO	ILMN_212332	ILMN_212332	9130230L23RIK	scl0231253.1_63	NM_177679.2			31343468	NM_177679.2	9130230L23Rik		ILMN_1218715	002320639	S	1331	CTTCCATCTGCTGGGTCTCTTGAATGACGCACTCCTCGTTTGACTTGGGA										
Mus musculus	RefSeq	ILMN_189809	ILMN_189809	TNPO2	NM_145390.3	NM_145390.3		212999	141801768	NM_145390.3	Tnpo2	NP_663365.2	ILMN_2464553	000510129	S	2614	CTGGGGGTGTTGTGCAGGACTTTATTTTCTTCTGCGATGCTGTAGCCTCC	8	+	87578984-87579000:87579078-87579110	8qC3	Mus musculus transportin 2 (importin 3, karyopherin beta 2b) (Tnpo2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Kpnb2b; MGC6380; AI464345; TRN2; AA414969; Knpb2b; AI852433; 1110034O24Rik; IPO3	Kpnb2b; MGC6380; AI464345; TRN2; AA414969; Knpb2b; AI852433; 1110034O24Rik; IPO3
Mus musculus	MEEBO	ILMN_224163	ILMN_224163	HPVC2	scl10162.1.1_10				6680268	NM_008283	Hpvc2		ILMN_2775833	001070112	S	15	CCATGCTCACCTACAATTTCCATTTTTACAAATTTTGGTGGGAGGGAGAG										
Mus musculus	Riken	ILMN_203665	ILMN_203665	MATN2	ri|9430088I16|PX00111A07|AK035102|3223					AK035102	Matn2		ILMN_1230447	004540445	S	3038	GAGCAGGGTCAGTTGGAAACCATTCAGAGGCACCATTTCCCTAGCATCAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]				
Mus musculus	RefSeq	ILMN_217685	ILMN_217685	SLC30A8	NM_172816.3	NM_172816.3		239436	146198857	NM_172816.3	Slc30a8	NP_766404.1	ILMN_1240040	000940040	S	1587	CCACCATGAACGAGGATGCATGGGATTTGTCGGCTTCTTGGATTATACAC				15qC	Mus musculus solute carrier family 30 (zinc transporter), member 8 (Slc30a8), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	C820002P14Rik; ZnT-8	C820002P14Rik; ZnT-8
Mus musculus	RefSeq	ILMN_217685	ILMN_217685	SLC30A8	NM_172816.3	NM_172816.3		239436	146198857	NM_172816.3	Slc30a8	NP_766404.1	ILMN_2686369	005860592	S	528	GCAAGCGCATGCCAAGTGGAGACTCTGTGCTGCTTCAGCAATATGCTTCA				15qC	Mus musculus solute carrier family 30 (zinc transporter), member 8 (Slc30a8), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	C820002P14Rik; ZnT-8	C820002P14Rik; ZnT-8
Mus musculus	RefSeq	ILMN_213385	ILMN_213385	SPATA19	NM_029299.2	NM_029299.2		75469	141803585	NM_029299.2	Spata19	NP_083575.1	ILMN_2636548	004290288	S	602	GAGAGACTCTAAACGCTGAGCCCTTGGTTACCACCATGACAATGCTGGAA	9	+	27209201-27209250	9qA4	Mus musculus spermatogenesis associated 19 (Spata19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		1700001L23Rik; AV047838	1700001L23Rik; AV047838
Mus musculus	RefSeq	ILMN_201415	ILMN_240292	LOC630980	XM_001006947.1	XM_001006947.1		630980	94412164	XM_001006947.1	LOC630980	XP_001006947.1	ILMN_2542216	004070129	S	67	GGGTGCCAGCAGAAGCCAGGGGACCCTTCTAATCTCCTTATTTCAGAAGG				19qA	PREDICTED: Mus musculus similar to Ig kappa chain V region EV15 precursor (LOC630980), mRNA.					
Mus musculus	RefSeq	ILMN_210038	ILMN_210038	BCL2L2	NM_007537.1	NM_007537.1		12050	6680773	NM_007537.1	Bcl2l2	NP_031563.1	ILMN_2636443	005080338	S	3178	CCAAGGCAAGAGCGCAAGTGGGCACTCAGTCCTGCAGTTACCAGTCCTAC	14	+	55506788-55506837	14qC3	Mus musculus BCL2-like 2 (Bcl2l2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	c98; Bcl-w; bclw; Gtrosa41; Gtrgal2; AW048834	c98; Bcl-w; bclw; Gtrosa41; Gtrgal2; AW048834
Mus musculus	RefSeq	ILMN_210038	ILMN_210038	BCL2L2	NM_007537.1	NM_007537.1		12050	6680773	NM_007537.1	Bcl2l2	NP_031563.1	ILMN_2601572	001980553	S	705	GGGCCGTGGCACTGGGGGCCCTGGTAACTGTAGGGGCCTTTTTTGCTAGC	14	+	55504315-55504364	14qC3	Mus musculus BCL2-like 2 (Bcl2l2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	c98; Bcl-w; bclw; Gtrosa41; Gtrgal2; AW048834	c98; Bcl-w; bclw; Gtrosa41; Gtrgal2; AW048834
Mus musculus	RefSeq	ILMN_210038	ILMN_210038	BCL2L2	NM_007537.1	NM_007537.1		12050	6680773	NM_007537.1	Bcl2l2	NP_031563.1	ILMN_2936517	004780653	S	3135	TGCTCTCCAAAGCCCAAAGGGACAAATAGGGACTTTGCTTAGGCCAAGGC	14	+	55506745-55506794	14qC3	Mus musculus BCL2-like 2 (Bcl2l2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	c98; Bcl-w; bclw; Gtrosa41; Gtrgal2; AW048834	c98; Bcl-w; bclw; Gtrosa41; Gtrgal2; AW048834
Mus musculus	RefSeq	ILMN_198663	ILMN_198663	LOC245580	XM_142108.2	XM_142108.2			38086727	XM_142108.2	LOC245580		ILMN_1213339	002510047	S	45	GTGTGTTTTTAAAGTCCTTGACCCCGAGACCTTCGTTCAGGCAGTGTCGG										
Mus musculus	RefSeq	ILMN_209068	ILMN_209068	PIGP	NM_019543.2	NM_019543.2		56176	31980951	NM_019543.2	Pigp	NP_062416.1	ILMN_2592239	006040215	S	408	GCTTTCGTTCCCGAATCTTGGTTAAACTCCTTAGGCTTAACTTACTGGCC	16	-	94592144-94592193	16qC4	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class P (Pigp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol [goid 17176] [evidence IEA]	Dscr5; Dcrc	Dscr5; Dcrc
Mus musculus	RefSeq	ILMN_209068	ILMN_209068	PIGP	NM_019543.2	NM_019543.2		56176	31980951	NM_019543.2	Pigp	NP_062416.1	ILMN_2798255	000940072	S	602	GCAGAGGAAAAACTACCAAGAGGATGCCATCCCAGCATTGAGAGATGTCC	16	-	94591698-94591747	16qC4	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class P (Pigp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol [goid 17176] [evidence IEA]	Dscr5; Dcrc	Dscr5; Dcrc
Mus musculus	RefSeq	ILMN_209068	ILMN_209068	PIGP	NM_019543.2	NM_019543.2		56176	31980951	NM_019543.2	Pigp	NP_062416.1	ILMN_2770710	002940333	S	769	GAGCATAATTATATTGATTGTCCTTTTAATACCCAATATTGACATGTAAA	16	-	94589180-94589229	16qC4	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class P (Pigp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol [goid 17176] [evidence IEA]	Dscr5; Dcrc	Dscr5; Dcrc
Mus musculus	Riken	ILMN_204542	ILMN_204542	B230396K19RIK	ri|B230396K19|PX00161K02|AK046470|1101					AK046470	B230396K19Rik		ILMN_1222754	004220243	S	989	GCAAGCCTTTGACCATGTAAAGGTGGGAGAGAACTGACTGCACTAAGTTG										
Mus musculus	RefSeq	ILMN_198070	ILMN_324815	CYP3A57	NM_001100180.1	NM_001100180.1		622127	154146255	NM_001100180.1	Cyp3a57	NP_001093650.1	ILMN_1227535	007160017	S	1273	ATCCTCTTCATCGGGACCCCGAGTACTGGCCAGAGCCTGAAGACTTCTGC				5qG2	Mus musculus cytochrome P450, family 3, subfamily a, polypeptide 57 (Cyp3a57), mRNA.				EG622127	EG622127
Mus musculus	MEEBO	ILMN_211985	ILMN_211985	CLECSF12	scl0001159.1_6				9910159	NM_020008	Clecsf12		ILMN_2663258	001300673	S	627	AGGCCTTTCCCGCAATCAGAGTGAAGGGCCATGGTTCTGGGAGGATGGAT										
Mus musculus	RefSeq	ILMN_222014	ILMN_222014	ZFP786	NM_177882.4	NM_177882.4		330301	146198614	NM_177882.4	Zfp786	NP_808550.1	ILMN_1247019	002490411	S	2317	TGGCTGAGCACATCCGAGTACACACAAAGGCCTGCCAGGTGCCACGTGAA				6qB2.3	Mus musculus zinc finger protein 786 (Zfp786), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	A730012O14Rik	A730012O14Rik
Mus musculus	Riken	ILMN_205281	ILMN_205281	4833403D03RIK	ri|4833403D03|PX00313B19|AK029353|1470					AK029353	4833403D03Rik		ILMN_1234503	002000309	S	1125	GCCTTATAGGCTGACTGGTAGCAGCACGCTGATTGACTAGAGGTTTCCCC										
Mus musculus	RefSeq	ILMN_212298	ILMN_212298	PCOLCE	NM_008788.2	NM_008788.2		18542	125490381	NM_008788.2	Pcolce	NP_032814.2	ILMN_1253741	000870670	S	1089	GCATCACCTGCCCAAAGCAGTACAAGCGGTCAGGCACCTTGCAGAGCAAC	5	-	138046969-138047018	5qG2	Mus musculus procollagen C-endopeptidase enhancer protein (Pcolce), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189612	ILMN_189612	ZFP385A	NM_013866.2	NM_013866.2		29813	119360326	NM_013866.2	Zfp385a	NP_038894.2	ILMN_1231720	006960523	S	1931	CCCACCCCCGCCTCGCCTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAG	15	-	103144636-103144685	15qF3	Mus musculus zinc finger protein 385A (Zfp385a), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Hzf	Hzf
Mus musculus	RefSeq	ILMN_189612	ILMN_189612	ZFP385A	NM_013866.2	NM_013866.2		29813	119360326	NM_013866.2	Zfp385a	NP_038894.2	ILMN_2462783	004900746	S	533	AGTCGGGACAGGGTGTAACCAAGGGTGAAGGGGGAACTTCAGTCCCAGCT	15	-	103146424-103146473	15qF3	Mus musculus zinc finger protein 385A (Zfp385a), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Hzf	Hzf
Mus musculus	Riken	ILMN_205955	ILMN_205955	C230023D16RIK	ri|C230023D16|PX00174B15|AK048725|2726					AK048725	C230023D16Rik		ILMN_1244050	005490709	S	2527	AGGTGCCTCACCCCATCAGTCAAAGCCCTCCAAGACACCACACTTGGCTG										
Mus musculus	RefSeq	ILMN_192548	ILMN_210644	MGAT5B	NM_172948.3	NM_172948.3		268510	65301484	NM_172948.3	Mgat5b	NP_766536.2	ILMN_2489103	004830605	S	524	CGGCTTCGTGGTTCCCGAGGCGGTCAGAGCCGGGCCCAGGACGGTGCGTC	11	+	116780700-116780749	11qE2	Mus musculus mannoside acetylglucosaminyltransferase 5, isoenzyme B (Mgat5b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl,1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-(N-acetyl-beta-D-glucosaminyl-1,6)-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R. Only branched mannose glycopeptides with non-reducing N-acetylglucosamine terminal residues act as acceptors [goid 30144] [evidence IEA]	C330018B01; GnT-IX; mGnTVB; RP23-41E14.1	C330018B01; GnT-IX; mGnTVB; RP23-41E14.1
Mus musculus	RefSeq	ILMN_210644	ILMN_210644	MGAT5B	NM_172948.3	NM_172948.3		268510	65301484	NM_172948.3	Mgat5b	NP_766536.2	ILMN_1248130	002350541	S	872	ATGCTGGCCAGGCTGGAGAATAGCAGCGAGCTGCACCGGACTGCCAGTGT	11	+	116793014-116793063	11qE2	Mus musculus mannoside acetylglucosaminyltransferase 5, isoenzyme B (Mgat5b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl,1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-(N-acetyl-beta-D-glucosaminyl-1,6)-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R. Only branched mannose glycopeptides with non-reducing N-acetylglucosamine terminal residues act as acceptors [goid 30144] [evidence IEA]	C330018B01; GnT-IX; mGnTVB; RP23-41E14.1	C330018B01; GnT-IX; mGnTVB; RP23-41E14.1
Mus musculus	RefSeq	ILMN_210644	ILMN_210644	MGAT5B	NM_172948.3	NM_172948.3		268510	65301484	NM_172948.3	Mgat5b	NP_766536.2	ILMN_2607740	002760110	S	3029	ACGTGGTTGGCAAGCACCAGCACTTTCTGAGCTCCGGTCACGCTCACTAC	11	+	116847033-116847082	11qE2	Mus musculus mannoside acetylglucosaminyltransferase 5, isoenzyme B (Mgat5b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl,1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-(N-acetyl-beta-D-glucosaminyl-1,6)-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R. Only branched mannose glycopeptides with non-reducing N-acetylglucosamine terminal residues act as acceptors [goid 30144] [evidence IEA]	C330018B01; GnT-IX; mGnTVB; RP23-41E14.1	C330018B01; GnT-IX; mGnTVB; RP23-41E14.1
Mus musculus	RefSeq	ILMN_215618	ILMN_215618	CHRNA4	NM_015730.4	NM_015730.4		11438	34328445	NM_015730.4	Chrna4	NP_056545.3	ILMN_2742576	001820487	S	1998	ATAGCGGCACCTAGCTCCCAGGTCTCTACAGGGCCATGCGACTCGTCAGT	2	-	180759405-180759454	2qH4	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 4 (Chrna4), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IPI]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IGI]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence TAS]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IMP];  [goid 4889] [evidence TAS];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IGI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IDA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ENFL1; Acra-4; Acra4; EBN1	ENFL1; Acra-4; Acra4; EBN1
Mus musculus	RefSeq	ILMN_215618	ILMN_215618	CHRNA4	NM_015730.4	NM_015730.4		11438	34328445	NM_015730.4	Chrna4	NP_056545.3	ILMN_2832675	002070482	S	4233	CTCAAATGTGAGTCTTGGAGACCAGTTCGGCTAGCCATCATATGTCTGGG	2	-	180757170-180757219	2qH4	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 4 (Chrna4), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IPI]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IGI]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence TAS]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IMP];  [goid 4889] [evidence TAS];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IGI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IDA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ENFL1; Acra-4; Acra4; EBN1	ENFL1; Acra-4; Acra4; EBN1
Mus musculus	RefSeq	ILMN_215618	ILMN_215618	CHRNA4	NM_015730.4	NM_015730.4		11438	34328445	NM_015730.4	Chrna4	NP_056545.3	ILMN_1245582	002260082	S	4375	GTGTGCTTGTTGGATCTTAGTTGTTTCTGTCTGAATAAACCGAGTCGTGG	2	-	180757028-180757077	2qH4	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 4 (Chrna4), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IPI]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IGI]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence TAS]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IMP];  [goid 4889] [evidence TAS];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IGI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IDA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ENFL1; Acra-4; Acra4; EBN1	ENFL1; Acra-4; Acra4; EBN1
Mus musculus	MEEBO	ILMN_191097	ILMN_191097	ITGA4	scl19087.1.5_4				48976066	NM_010576	Itga4		ILMN_1245348	006560014	S	1	CTGAGCCAGTGTTTTCAGTTTTCTCCTGTCATCTGGGAGCTCTTTGTAAA						The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence IMP]		
Mus musculus	RefSeq	ILMN_200019	ILMN_200019	LOC383109	XM_356880.1	XM_356880.1			38079869	XM_356880.1	LOC383109		ILMN_1214842	005900521	S	328	CCAGGAGAGTCTCACCACTCACTTACCCCGATTCTGGATGCGGTAGCAAG										
Mus musculus	Riken	ILMN_202500	ILMN_202500	6230425C21RIK	ri|2810005G07|ZX00046A07|AK012678|768					AK012678	6230425C21Rik		ILMN_2550095	004900315	S	301	CAGGTCAGCTGTTAGCCGTCTCATTGGCCAGTGGCAGCATGGGCAGTGCC										
Mus musculus	RefSeq	ILMN_209771	ILMN_209771	2410016F19RIK	NM_026113.2	NM_026113.2		67371	27754090	NM_026113.2	2410016F19Rik	NP_080389.2	ILMN_2940399	005560577	S	798	ACCAGAGTCACGTAGGACCACACAGGAATTCAGCTTTTAGAACATGAGAG	10	-	39938791-39938840	10qB1	Mus musculus RIKEN cDNA 2410016F19 gene (2410016F19Rik), mRNA.				AU019813	AU019813
Mus musculus	RefSeq	ILMN_209771	ILMN_209771	2410016F19RIK	NM_026113.2	NM_026113.2		67371	27754090	NM_026113.2	2410016F19Rik	NP_080389.2	ILMN_2940394	002340470	S	734	GTGTGGCTCACCATCCCGTGTTATTTTGACAGTATGCGTTTCCAGGTGCG	10	-	39938855-39938904	10qB1	Mus musculus RIKEN cDNA 2410016F19 gene (2410016F19Rik), mRNA.				AU019813	AU019813
Mus musculus	RefSeq	ILMN_213853	ILMN_213853	SLC6A6	NM_009320.3	NM_009320.3		21366	34328477	NM_009320.3	Slc6a6	NP_033346.2	ILMN_2641467	000770288	S	5913	GGAGGAGCGTTTGTGTTTGAAGGATCCTTGGTGTGTGACCTGTCTTGCAG	6	+	91708829-91708878	6qD1	Mus musculus solute carrier family 6 (neurotransmitter transporter, taurine), member 6 (Slc6a6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of taurine into, out of, within or between cells [goid 15734] [evidence IDA]; The directed movement of taurine into, out of, within or between cells [goid 15734] [evidence IMP]; The directed movement of beta-alanine, 3-aminopropanoic acid, into, out of, within or between cells [goid 1762] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: taurine(out) + Na+(out) = taurine(in) + Na+(in) [goid 5369] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of taurine from one side of the membrane to the other. Taurine (2-aminoethanesulfonic acid) is a sulphur-containing amino acid derivative which is important in the metabolism of fats [goid 5368] [evidence IDA]; Catalysis of the transfer of beta-alanine from one side of a membrane to the other. Beta-alanine is 3-aminopropanoic acid [goid 1761] [evidence IDA]	AA589629; C80501; Taut	AA589629; C80501; Taut
Mus musculus	RefSeq	ILMN_188807	ILMN_188807	WRN	NM_011721.3	NM_011721.3		22427	142358110	NM_011721.3	Wrn	NP_035851.2	ILMN_1226576	007200546	S	5089	TTCAATATTTGAAGATGCCAATTTTTAATGTCTTATGTTTCACAAAGAAT	8	-	34346064-34346113	8qA3-qA4	Mus musculus Werner syndrome homolog (human) (Wrn), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISO]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IGI]; Any process that modulates the rate of growth of all or part of an organism [goid 40009] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [evidence IGI]; The process associated with progression of the cell from its inception to the end of its lifespan that occurs as the cell continues cycles of growth and division [goid 1302] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence ISO]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence ISO]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence ISO]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence IDA]	AI846146	AI846146
Mus musculus	RefSeq	ILMN_188807	ILMN_188807	WRN	NM_011721.3	NM_011721.3		22427	142358110	NM_011721.3	Wrn	NP_035851.2	ILMN_1244390	006580164	S	6241	ACCAGACTCCAGGCTCTTCTTCTCCTGAACTCATCCACACAACGAGAACA	8	-	34344912-34344961	8qA3-qA4	Mus musculus Werner syndrome homolog (human) (Wrn), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISO]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IGI]; Any process that modulates the rate of growth of all or part of an organism [goid 40009] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [evidence IGI]; The process associated with progression of the cell from its inception to the end of its lifespan that occurs as the cell continues cycles of growth and division [goid 1302] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence ISO]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence ISO]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence ISO]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence IDA]	AI846146	AI846146
Mus musculus	RefSeq	ILMN_199146	ILMN_199146	LOC327959	XM_282966.2	XM_282966.2			38091455	XM_282966.2	LOC327959		ILMN_2534209	007150543	S	1479	TGTCGTCGCCTACCCCATGATGTAAAGAGTGCTCTCCAGAGGAAGACATC										
Mus musculus	MEEBO	ILMN_193576	ILMN_193576	KIF24	scl24423.16_17				21492625	NM_145101	Kif24		ILMN_1232865	001690435	S	833	GGGTTCATAATACTTACTGACTTGTCCCTACCTAAAGGCAGATAGAACTC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214385	ILMN_214385	EFCAB9	NM_027031.2	NM_027031.2		69306	142380128	NM_027031.2	Efcab9	NP_081307.1	ILMN_2647458	002120465	S	383	CAGTCTTTGAGCTGCTTGATCTGGACGGGGAGATGAATATAGGTGCGGCC	11	-	32423614-32423663	11qA4	Mus musculus EF-hand calcium binding domain 9 (Efcab9), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	4930403C08Rik; MGC107247	4930403C08Rik; MGC107247
Mus musculus	MEEBO	ILMN_184380	ILMN_184380	NUDT12	scl49734.7_165				21312663	NM_026497	Nudt12		ILMN_2418172	002630747	S	18	CTGTAAATATAAATCGTTAACCAGTTAGCAAGGGGCAAGTGTCACACAAG						A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NAD+ + H2O = AMP + NMN [goid 210] [evidence IEA]		
Mus musculus	Riken	ILMN_202885	ILMN_202885	A230020C16RIK	ri|A230020C16|PX00126P03|AK038488|610					AK038488	A230020C16Rik		ILMN_2553063	004250168	S	329	CCGAAACACCTGTCCCCAGCCTCAGGCTCGCTCAGAGCTCCTCAAGATTC										
Mus musculus	MEEBO	ILMN_189509	ILMN_189509	E130014J05RIK	scl21487.17_601				22122440	NM_145989	E130014J05Rik		ILMN_2461898	004180450	S	5	GTAGCTTACTTCCTGAGATTTTGGCTTTGTTTATACAATCTGAGGGTGGT										
Mus musculus	MEEBO	ILMN_189509	ILMN_189509	E130014J05RIK	scl21487.17_601				22122440	NM_145989	E130014J05Rik		ILMN_2630039	002450670	S	2915	GGTCGAGGGCCCTGGAGGCACTGGGGTACCTCTGATTTTACATTTCTATC										
Mus musculus	RefSeq	ILMN_254125	ILMN_254125	SLC38A8	NM_001009950.1	NM_001009950.1		234788	57977292	NM_001009950.1	Slc38a8	NP_001009950.1	ILMN_3161026	001030575	S	2521	AACCTGAACGTGCCAGGCTGTGAGGTGGGCATCTCTGCAACTGCCAACTC	8	-	122003554-122003603	8qE1	Mus musculus solute carrier family 38, member 8 (Slc38a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	MGC113805	MGC113805
Mus musculus	Riken	ILMN_206858	ILMN_206858	D630024I10RIK	ri|D630024I10|PX00197G11|AK085426|3895					AK085426	D630024I10Rik		ILMN_1223393	001660288	S	3800	GCTTCGCTTACGCCGATACAGTGCTGCCCTTCTGACATCTATGGCACCAG										
Mus musculus	MEEBO	ILMN_211063	ILMN_211063	1700041E20RIK	scl26749.5.1_10				20825122	XM_131990	1700041E20Rik		ILMN_2612108	005550441	S	410	TGAGGAGGACCTCGAGGAGATTGTGCTAAGACTACTGAAAAGTGACGACG										
Mus musculus	RefSeq	ILMN_211209	ILMN_211209	OLFR509	NM_146372.1	NM_146372.1		258369	22129560	NM_146372.1	Olfr509	NP_666484.1	ILMN_2613619	003710392	S	776	GACCCAAGAACAGCTACTCTTTTAGAGATGCCACACTGTTGGCAGTGACA	7	-	115789263-115789312	7qE3	Mus musculus olfactory receptor 509 (Olfr509), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-14	MOR267-14
Mus musculus	MEEBO	ILMN_223997	ILMN_223997	CAT	scl18935.13_58				6753271	NM_009804	Cat		ILMN_2772845	004290561	S	2349	ATGTTAATACGCAGTGATTTCACATAGGATGATTTGTACTTGCTTACATT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The chemical reactions and pathways involving hemoglobin, including its uptake and utilization [goid 20027] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IDA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14068] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction in which the peroxide group acts as a hydrogen or electron acceptor [goid 16684] [evidence IDA]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IDA]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IMP]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IDA]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IMP]; Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid [goid 4046] [evidence IMP]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IDA]		
Mus musculus	MEEBO	ILMN_195188	ILMN_195188	LIX1	scl51074.6_288				13385141	NM_025681	Lix1		ILMN_2686593	003940615	S	367	TGGCGCTCATCAACTCTCTCTTCAATGAGCTACCCTCCCGAAGGATCACC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_253557	ILMN_253557	A530098C11RIK	NM_001013799.1	NM_001013799.1		433294	85701483	NM_001013799.1	A530098C11Rik	NP_001013821.1	ILMN_2986586	001190368	S	683	CCATGGTGTACCTTTCCCAGCCAGGCACTGTGGTGCTGTGGGCAAACAAA	1	-	44066606-44066655	1qC1.1	Mus musculus RIKEN cDNA A530098C11 gene (A530098C11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_253557	ILMN_253557	A530098C11RIK	NM_001013799.1	NM_001013799.1		433294	85701483	NM_001013799.1	A530098C11Rik	NP_001013821.1	ILMN_2986591	004230239	S	303	AGAATCCATTGAGAACTATGGCACAGTGGTGTGGCCAGGGGCTACAGCTC	1	-	44067484-44067494:44070467-44070505	1qC1.1	Mus musculus RIKEN cDNA A530098C11 gene (A530098C11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216576	ILMN_216576	LIN52	NM_173756.4	NM_173756.4		217708	146198732	NM_173756.4	Lin52	NP_776117.1	ILMN_2672731	000610156	S	1978	TCCTATTCACCAGCACTTAATTAATGTAAGTAGATGTTTTAGACTTGTGC				12qD1	Mus musculus lin-52 homolog (C. elegans) (Lin52), mRNA.				5830457H20Rik	5830457H20Rik
Mus musculus	RefSeq	ILMN_210398	ILMN_210398	ART3	NM_181728.1	NM_181728.1		109979	32171189	NM_181728.1	Art3	NP_859417.1	ILMN_1223147	005890338	S	705	AGGAACTAGCAACGACCTTGTCCTTCAGAGCATAAACAGTACCTGCAGCT	5	+	92822130-92822179	5qE2	Mus musculus ADP-ribosyltransferase 3 (Art3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IEA]	4930569O04Rik	4930569O04Rik
Mus musculus	RefSeq	ILMN_210398	ILMN_210398	ART3	NM_181728.1	NM_181728.1		109979	32171189	NM_181728.1	Art3	NP_859417.1	ILMN_2613076	007000500	S	1110	CTATAGCTTGAAACGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGG	5	+	92843387-92843436	5qE2	Mus musculus ADP-ribosyltransferase 3 (Art3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IEA]	4930569O04Rik	4930569O04Rik
Mus musculus	RefSeq	ILMN_210398	ILMN_210398	ART3	NM_181728.1	NM_181728.1		109979	32171189	NM_181728.1	Art3	NP_859417.1	ILMN_2836607	004260594	S	1123	CGCTATCTTAATCTTTATCTGAAAGACTGCTATGGGGATCCCACAGGAAG	5	+	92843400-92843449	5qE2	Mus musculus ADP-ribosyltransferase 3 (Art3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IEA]	4930569O04Rik	4930569O04Rik
Mus musculus	RefSeq	ILMN_218669	ILMN_218669	KCNK5	NM_021542.2	NM_021542.2		16529	31543036	NM_021542.2	Kcnk5	NP_067517.1	ILMN_2982781	004570463	S	3274	GCACACCAACCACGCTGTGTGCATGTGCCGATGGTGAAGGCAGATGTAAT	14	-	18930794-18930843	14qA3	Mus musculus potassium channel, subfamily K, member 5 (Kcnk5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	TASK-2	TASK-2
Mus musculus	RefSeq	ILMN_185694	ILMN_252583	TMEM129	NM_026698.2	NM_026698.2		68366	73853455	NM_026698.2	Tmem129	NP_080974.2	ILMN_2429215	003850050	S	1925	GTAGCTGCTAGAGGGATGACCTCTCCTTCAACTTGTCCTGAAGCACTTAC	5	-	33996134-33996183	5qB2	Mus musculus transmembrane protein 129 (Tmem129), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			0610039G24Rik; 2410015J15Rik; AA409575	0610039G24Rik; 2410015J15Rik; AA409575
Mus musculus	RefSeq	ILMN_217886	ILMN_252583	TMEM129	NM_026698.2	NM_026698.2		68366	73853455	NM_026698.2	Tmem129	NP_080974.2	ILMN_2688871	001660678	S	795	TTTGCTTCCCATGTGGAGGTCAACCCAGCCTATTCAGTACCCAGCAACCA	5	-	33997362-33997411	5qB2	Mus musculus transmembrane protein 129 (Tmem129), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			0610039G24Rik; 2410015J15Rik; AA409575	0610039G24Rik; 2410015J15Rik; AA409575
Mus musculus	RefSeq	ILMN_184889	ILMN_245351	TLE2	NM_019725.1	NM_019725.1		21886	9789970	NM_019725.1	Tle2	NP_062699.1	ILMN_1250103	006580653	S	2277	GCAAGGACAACCTGCTCAATGCCTGGAGGACACCCTATGGGGCCAGCATT	10	+	81052186-81052235	10qC1	Mus musculus transducin-like enhancer of split 2, homolog of Drosophila E(spl) (Tle2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]		Grg2; KIAA4188; mKIAA4188	Grg2; KIAA4188; mKIAA4188
Mus musculus	RefSeq	ILMN_192281	ILMN_242352	FKBP1A	NM_008019.2	NM_008019.2		14225	94158952	NM_008019.2	Fkbp1a	NP_032045.1	ILMN_2776025	001340491	S	622	GGGAGCTCTTCCTGACGTCCCACCACCCTTTGTATAGACACCTACCCGAC	2	+	151386408-151386457	2qG3	Mus musculus FK506 binding protein 1a (Fkbp1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with the immunosuppressant FK506 [goid 5528] [evidence ISA]	mFKBP12; FKBP12-T1; FKBP12; 12kDa; Fkbp1; Fkbp; FKBP12-T2; mFKBP1	mFKBP12; FKBP12-T1; FKBP12; 12kDa; Fkbp1; Fkbp; FKBP12-T2; mFKBP1
Mus musculus	RefSeq	ILMN_199680	ILMN_327750	LOC100040863	XR_032231.1	XR_032231.1		100040863	149265407	XR_032231.1	LOC100040863		ILMN_1239135	000240075	S	8	CCCGGCTGCTCAGGTTATTTCACAGGGAGAATGGCAATCAAGGAGAGACC	14	+	43307089-43307138	14qB	PREDICTED: Mus musculus hypothetical protein LOC100040863 (LOC100040863), misc RNA.					
Mus musculus	RefSeq	ILMN_196713	ILMN_319318	LOC100038898	XM_001471682.1	XM_001471682.1		100038898	149255115	XM_001471682.1	LOC100038898	XP_001471732.1	ILMN_2771043	005690162	S	334	GAACTGCAGGAAACTCTAAACTGCCAAGATAAGTGCAGCACCACCACGCA	6	-	130253324-130253373	6qF3	PREDICTED: Mus musculus hypothetical protein LOC100038898 (LOC100038898), mRNA.					
Mus musculus	RefSeq	ILMN_196715	ILMN_319318	LOC100038898	XM_001471682.1	XM_001471682.1		100038898	149255115	XM_001471682.1	LOC100038898	XP_001471732.1	ILMN_1246951	004290189	S	712	ATTGGATTTTCATATGACAATAAGAGAAAAGATTGGGTATGGATTGACAA	6	-	130248735-130248784	6qF3	PREDICTED: Mus musculus hypothetical protein LOC100038898 (LOC100038898), mRNA.					
Mus musculus	RefSeq	ILMN_213962	ILMN_213962	ORM1	NM_008768.1	NM_008768.1		18405	6679181	NM_008768.1	Orm1	NP_032794.1	ILMN_1226935	000060196	S	379	CCTTTGCCCACCTTATAGTGCTGAGGAAACATGGGGCCTTCATGCTTGCC	4	+	63007089-63007138	4qB3	Mus musculus orosomucoid 1 (Orm1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Agp-1; Orm-1; Agp-2	Agp-1; Orm-1; Agp-2
Mus musculus	RefSeq	ILMN_204187	ILMN_218313	CCDC28B	NM_025455.2	NM_025455.2		66264	70887805	NM_025455.2	Ccdc28b	NP_079731.2	ILMN_1236759	007160543	S	827	TGTTTAATTCCAACCAGTGCCCCCGACCCCATAGCACCAAGGGGCTTCCG	4	-	129297977-129298026	4qD2.2	Mus musculus coiled coil domain containing 28B (Ccdc28b), mRNA.				1810010N17Rik; 1110002E08Rik	1810010N17Rik; 1110002E08Rik
Mus musculus	RefSeq	ILMN_218313	ILMN_218313	CCDC28B	NM_025455.2	NM_025455.2		66264	70887805	NM_025455.2	Ccdc28b	NP_079731.2	ILMN_1220430	003360301	S	582	GGCTTGCCTGAGGAGCAGAAGAAGACAATGGCTGACCGCAACCTGGACCA	4	-	129298329-129298378	4qD2.2	Mus musculus coiled coil domain containing 28B (Ccdc28b), mRNA.				1810010N17Rik; 1110002E08Rik	1810010N17Rik; 1110002E08Rik
Mus musculus	RefSeq	ILMN_218313	ILMN_218313	CCDC28B	NM_025455.2	NM_025455.2		66264	70887805	NM_025455.2	Ccdc28b	NP_079731.2	ILMN_2694257	003450170	S	473	GCTGGAGCATGTTCGGGAGATGCAGGAGAAGTTGGCCAGACTGCACTTCA	4	-	129299297-129299346	4qD2.2	Mus musculus coiled coil domain containing 28B (Ccdc28b), mRNA.				1810010N17Rik; 1110002E08Rik	1810010N17Rik; 1110002E08Rik
Mus musculus	RefSeq	ILMN_210316	ILMN_210316	CNKSR2	NM_177751.2	NM_177751.2		245684	31343125	NM_177751.2	Cnksr2	NP_808419.1	ILMN_1214405	000730373	S	1575	CAAGCTACGACCTATATCTATGCCAGTGGAATATAATTGGGTGGGGGACT	X	-	154328053-154328102	XqF4	Mus musculus connector enhancer of kinase suppressor of Ras 2 (Cnksr2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]	Cnk2; C030004A01; Ksr2; mKIAA0902	Cnk2; C030004A01; Ksr2; mKIAA0902
Mus musculus	RefSeq	ILMN_210316	ILMN_210316	CNKSR2	NM_177751.2	NM_177751.2		245684	31343125	NM_177751.2	Cnksr2	NP_808419.1	ILMN_2641132	006650722	S	5326	AGGCTAGCTCTGTTACTAGTATGCAGCTTCTACTTTTGTAAAGTCAGCTG	X	-	154259546-154259595	XqF4	Mus musculus connector enhancer of kinase suppressor of Ras 2 (Cnksr2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]	Cnk2; C030004A01; Ksr2; mKIAA0902	Cnk2; C030004A01; Ksr2; mKIAA0902
Mus musculus	Riken	ILMN_204435	ILMN_204435	A630074O09RIK	ri|A630074O09|PX00147B24|AK042246|1599					AK042246	A630074O09Rik		ILMN_1247623	000630477	S	1402	GGTAGCCCAGGTTGTACTGGAACTCTTGACAGTCCTCCTACCTCAGCCTC										
Mus musculus	RefSeq	ILMN_198859	ILMN_198859	LOC234097	XM_146182.2	XM_146182.2			38089128	XM_146182.2	LOC234097		ILMN_1259833	004120551	S	167	CTGTTAAACCGACAGCCGTGTGTGACCTTGGACCAGGAACTGAAGAACTT										
Mus musculus	RefSeq	ILMN_200029	ILMN_237836	EG625835	XM_890398.1	XM_890398.1		625835	82959201	XM_890398.1	EG625835	XP_895491.1	ILMN_2537343	006270438	S	241	TGGTTCCTGAACAGACAGAAGGATGGGAAGGGTGGGAAGTACAGCCAGGC	16	+	23179869-23179918	16qB1	PREDICTED: Mus musculus predicted gene, EG625835 (EG625835), mRNA.					
Mus musculus	Riken	ILMN_201831	ILMN_201831	ET-A, GPCR	ri|5730403K14|PX00002O14|AK017486|1627					AK017486	ET-A, GPCR		ILMN_1223380	005130050	S	1317	ATTCACAGGAAGGTGGCTGAGGCCTTTGGAAATCAGCACGCCATGGAGGC										
Mus musculus	RefSeq	ILMN_207508	ILMN_330954	LOC100041422	XM_001476355.1	XM_001476355.1		100041422	149265462	XM_001476355.1	LOC100041422	XP_001476405.1	ILMN_1260504	006200347	I	615	GACCCAACAGGACCAGCCAAAATTGGCATTCTCATAGCTCTCCTGGATGC	14	+	44706274-44706280	14qC1	PREDICTED: Mus musculus similar to CDNA sequence BC061237 (LOC100041422), mRNA.					
Mus musculus	MEEBO	ILMN_222630	ILMN_222630	LAMA3	scl52235.77.1_42	XM_128926.3			38083771	XM_128926.3	Lama3		ILMN_2752545	005810039	S	2953	CATAGCACACAGTGCTGTACAGATCTCTGTCTTTCAGTGACACACATGCA						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220232	ILMN_220232	TRMT1	NM_198020.1	NM_198020.1		212528	37574125	NM_198020.1	Trmt1	NP_932137.1	ILMN_2719460	007550240	S	1743	TCCCGCCAGCGAGGACTTAAGCGCTTCCAGGCCAATCCAGAAGCCAACTG	8	+	87223081-87223130	8qC3	Mus musculus TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae) (Trmt1), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N2-methylguanine [goid 4809] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D8Ertd812e; 6720477L24; 6720406L13Rik	D8Ertd812e; 6720477L24; 6720406L13Rik
Mus musculus	RefSeq	ILMN_231874	ILMN_231874	TAF9B	NM_001001176.1	NM_001001176.1		407786	47564075	NM_001001176.1	Taf9b	NP_001001176.1	ILMN_2859348	003780040	S	2246	CTGCCTACCTCACAGGGATGTTGTGAGGGTTTAGCTGGTGTGTGTGAAAG	X	-	103402291-103402340	XqD	Mus musculus TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf9b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Taf9l; BC066223	Taf9l; BC066223
Mus musculus	RefSeq	ILMN_198618	ILMN_231874	TAF9B	NM_001001176.1	NM_001001176.1		407786	47564075	NM_001001176.1	Taf9b	NP_001001176.1	ILMN_1243080	006130332	S	976	TTCCGATATGTGTCACTAGCAGCAGCGCTTGGACTTCAGCTCCTGGTCTC	X	-	103403561-103403610	XqD	Mus musculus TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf9b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Taf9l; BC066223	Taf9l; BC066223
Mus musculus	RefSeq	ILMN_212141	ILMN_212141	NKIRAS2	NM_028024.2	NM_028024.2		71966	118130408	NM_028024.2	Nkiras2	NP_082300.1	ILMN_2623184	006580370	S	1633	GTATTTATGCACCTGCTGCTCTGGTGAAGGTGGGATAAGCCGCGCCCCCA	11	+	100488536-100488585	11qD	Mus musculus NFKB inhibitor interacting Ras-like protein 2 (Nkiras2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	KBRAS2; D630018G21Rik; 2410003M04Rik; 4930527H08Rik	KBRAS2; D630018G21Rik; 2410003M04Rik; 4930527H08Rik
Mus musculus	MEEBO	ILMN_187929	ILMN_187929	CPEB4	scl0067579.1_156				52138748	NM_026252	Cpeb4		ILMN_1249846	002750458	S	1170	CTGGAGGCCAAGAGGATCTAAACTTGCTGTAGCATTTTCTTAGAGGAGAG								Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187929	ILMN_187929	CPEB4	scl0067579.1_156				52138748	NM_026252	Cpeb4		ILMN_1257184	001660246	S	19	GTGGCAAGCTCACTCCAGTTATGTGCAATACTTATCTCACACTTTGGAAG								Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	Riken	ILMN_207292	ILMN_207292	4632407M08RIK	ri|4632407M08|PX00637G24|AK076274|2612					AK076274	4632407M08Rik		ILMN_2586502	001990184	S	2058	GCCATTGAGATATTGAGGGGTGGGGGTAGGGAAAATAGAGTTGGTTGGCC										
Mus musculus	RefSeq	ILMN_222015	ILMN_222015	HEPH	NM_181273.3	NM_181273.3		15203	142349030	NM_181273.3	Heph	NP_851790.1	ILMN_2748755	003130349	S	3487	CTCAACACCTGGGGTGTTATGTGATGGTCAAACCATACCTGAACTAAACA	X	+	93726345-93726394	XqC3	Mus musculus hephaestin (Heph), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence TAS]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Cpl; sla; C130006F04Rik; mKIAA0698	Cpl; sla; C130006F04Rik; mKIAA0698
Mus musculus	RefSeq	ILMN_218664	ILMN_218664	HERC4	NM_026101.2	NM_026101.2		67345	32451487	NM_026101.2	Herc4	NP_080377.2	ILMN_2722469	005270138	S	1643	GTACCAGATTTTCAGGGGTTGATATGAACGCTGCTAGACTCTTATTCCAC	10	+	62750669-62750718	10qB4	Mus musculus hect domain and RLD 4 (Herc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	9530080M15Rik; 1700056O17Rik; mKIAA1593; 4921531D01Rik	9530080M15Rik; 1700056O17Rik; mKIAA1593; 4921531D01Rik
Mus musculus	RefSeq	ILMN_218664	ILMN_218664	HERC4	NM_026101.2	NM_026101.2		67345	32451487	NM_026101.2	Herc4	NP_080377.2	ILMN_2965066	004220338	S	3464	AAACCACTCGTGTTTCTCTTGTGAATTCAGCACAGTGAGAGTTACTTCTG	10	+	62780262-62780311	10qB4	Mus musculus hect domain and RLD 4 (Herc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	9530080M15Rik; 1700056O17Rik; mKIAA1593; 4921531D01Rik	9530080M15Rik; 1700056O17Rik; mKIAA1593; 4921531D01Rik
Mus musculus	RefSeq	ILMN_218664	ILMN_218664	HERC4	NM_026101.2	NM_026101.2		67345	32451487	NM_026101.2	Herc4	NP_080377.2	ILMN_2698689	004480519	S	3654	GGAATTTTAAGAGTTTGCATATTTCGGAAATTACCTGATGTGTGGGTGCA	10	+	62780452-62780501	10qB4	Mus musculus hect domain and RLD 4 (Herc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	9530080M15Rik; 1700056O17Rik; mKIAA1593; 4921531D01Rik	9530080M15Rik; 1700056O17Rik; mKIAA1593; 4921531D01Rik
Mus musculus	MEEBO	ILMN_188641	ILMN_188641	XPO5	scl0072322.2_55	NM_028198.1			24429569	NM_028198.1	Xpo5		ILMN_1216198	005860546	S	13	CAGAGCTGGGAAATAGCAACTAGAATCGAGGTCACTGTCCACCCTACAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IDA]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]; Interacting selectively with transfer RNA [goid 49] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Mus musculus	Riken	ILMN_206548	ILMN_206548	C130087D21RIK	ri|C130087D21|PX00172M21|AK081918|1788					AK081918	C130087D21Rik		ILMN_2580919	005860639	S	1269	TTCTACCCCTGAGAATAGAACTACCAACCACTATGTCTTCCATAGTCCAC										
Mus musculus	RefSeq	ILMN_222244	ILMN_222244	6430573F11RIK	NM_176952.4	NM_176952.4		319582	118130320	NM_176952.4	6430573F11Rik	NP_795926.2	ILMN_2893471	001660332	S	1428	GTGGTGGCCTATCATCTGTTCAACGGGGCTGGTGTGGGTACCAGAAGCAG	8	+	37575670-37575719	8qA4	Mus musculus RIKEN cDNA 6430573F11 gene (6430573F11Rik), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_252090	ILMN_252090	GM1631	NM_201366.1	NM_201366.1		381371	41235763	NM_201366.1	Gm1631	NP_958754.1	ILMN_2839762	004830382	S	382	TGGCCTGACACCAGCCATCCACCTCCAGCAGCAAGGGAACCAGGAAATCT	2	+	71568489-71568490:71568766-71568771:71568772-71568813	2qC2	Mus musculus gene model 1631, (NCBI) (Gm1631), mRNA.					
Mus musculus	RefSeq	ILMN_211148	ILMN_238591	DYSFIP1	NM_026814.3	NM_026814.3		68701	142377209	NM_026814.3	Dysfip1	NP_081090.1	ILMN_2613038	004220575	S	469	CGATCTGCCCTCCGACCTTATTGACCCGGACTTCAAAGACTTGGTGGAAC	11	-	120411545-120411594	11qE2	Mus musculus dysferlin interacting protein 1 (Dysfip1), mRNA.				toonin; RP23-84C12.1; 1110033I14Rik	toonin; RP23-84C12.1; 1110033I14Rik
Mus musculus	Riken	ILMN_201906	ILMN_201906	4933421E18RIK	ri|4933421E18|PX00020L07|AK016859|935					AK016859	4933421E18Rik		ILMN_1258520	005290719	S	484	CATCGATGCTACTATGAAGGAGCTGAAGGGGATGCAGAATCTGCGGAGCC										
Mus musculus	RefSeq	ILMN_216984	ILMN_216984	TARS2	NM_027931.2	NM_027931.2		71807	142350271	NM_027931.2	Tars2	NP_082207.1	ILMN_1237311	000240189	S	1956	AGGACTTGTGAGTGATCTCGATGCAGACTCTGGACTGACCCTCAGCCGGA	3	-	95545286-95545335	3qF2.1	Mus musculus threonyl-tRNA synthetase 2, mitochondrial (putative) (Tars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling threonine to threonyl-tRNA, catalyzed by threonyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6435] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules [goid 43039] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + L-threonyl-tRNA(Thr) [goid 4829] [evidence IEA]; Catalysis of the ligation of two substances via a carbon-oxygen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate, to form aminoacyl-tRNA or a related compound [goid 16876] [evidence IEA]	AI429208; Tarsl1; 2610024N01Rik	AI429208; Tarsl1; 2610024N01Rik
Mus musculus	RefSeq	ILMN_210223	ILMN_210223	EPYC	NM_007884.2	NM_007884.2		13516	31982410	NM_007884.2	Epyc	NP_031910.1	ILMN_2603401	005860544	S	1158	CTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGCAC	10	+	97143969-97144018	10qC3	Mus musculus epiphycan (Epyc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLRR3B; Dspg3; PG-Lb	SLRR3B; Dspg3; PG-Lb
Mus musculus	RefSeq	ILMN_210223	ILMN_210223	EPYC	NM_007884.2	NM_007884.2		13516	31982410	NM_007884.2	Epyc	NP_031910.1	ILMN_2940568	007610301	S	1641	CATCAACTCATTTTGCAAACTTGGTTAGTTGACAGCTACCTGTATTCCTC	10	+	97144452-97144501	10qC3	Mus musculus epiphycan (Epyc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLRR3B; Dspg3; PG-Lb	SLRR3B; Dspg3; PG-Lb
Mus musculus	RefSeq	ILMN_200049	ILMN_238906	EG384187	XM_916275.1	XM_916275.1		384187	82897142	XM_916275.1	EG384187	XP_921368.1	ILMN_1217278	004900259	S	302	TAAGCCCTCAGGAGACTGATGCCAAGGTGCAGTCTGAGAAGCAGAAGGCC				5qD	PREDICTED: Mus musculus predicted gene, EG384187 (EG384187), mRNA.					
Mus musculus	RefSeq	ILMN_198452	ILMN_198452	LOC381233	XM_358532.1	XM_358532.1			38085204	XM_358532.1	LOC381233		ILMN_2531739	007650717	S	142	CCCAGCTACCTCATGCCACACACTCTTCAGAGAGAAGGAAGTGGGCGCAG										
Mus musculus	RefSeq	ILMN_211668	ILMN_211668	GNG3	NM_010316.3	NM_010316.3		14704	84579907	NM_010316.3	Gng3	NP_034446.1	ILMN_1253137	006770608	S	1614	AATGTGTTAAACAGGCCATCTTGGAGCACCCTGTTCCTTGGTCTCTGTGG	19	-	8911454-8911503	19qA	Mus musculus guanine nucleotide binding protein (G protein), gamma 3 (Gng3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]		
Mus musculus	Riken	ILMN_203683	ILMN_203683	9530050F08RIK	ri|9530050F08|PX00113G18|AK035450|3498					AK035450	9530050F08Rik		ILMN_1234177	003310408	S	3311	AGGGATGCAGTAGAAGAGGATGTGCTGTGGCCTATGGGTAGCCTGAGAAG										
Mus musculus	RefSeq	ILMN_199769	ILMN_199769	LOC382980	XM_356783.1	XM_356783.1			38077042	XM_356783.1	LOC382980		ILMN_1216620	005960634	S	441	CAAGAAAGATGTGCCAAGAGAGAGACATACCGCATGGGAGGGGATTCGAC										
Mus musculus	MEEBO	ILMN_195140	ILMN_195140	SCL0001905.1_3	scl0001905.1_3	AY267348.1			30385619	AY267348.1	scl0001905.1_3		ILMN_1255833	003400709	S	19	AGACCGGGCCATGCCGCGCAATGATCTCCCGCTGGTACTTTGATGTCACT										
Mus musculus	RefSeq	ILMN_218463	ILMN_218463	D830014E11RIK	NM_177251.3	NM_177251.3		320751	142371498	NM_177251.3	D830014E11Rik	NP_796225.1	ILMN_2696171	001940288	S	2824	GGAGATGTTGACTGTGCTATCGTCCCAGCCGGCTTTTCCTCTCAGTGTTG	5	+	106261299-106261348	5qE5	Mus musculus RIKEN cDNA D830014E11 gene (D830014E11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216440	ILMN_216440	PSMB4	NM_008945.2	NM_008945.2		19172	141803332	NM_008945.2	Psmb4	NP_032971.1	ILMN_2671124	002750670	S	645	GACTGAGGCTCGGGAGCTTGTGGAGCGCTGCATGAGAGTGCTGTACTACA	3	-	94688861-94688910	3qF2.1	Mus musculus proteasome (prosome, macropain) subunit, beta type 4 (Psmb4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217777	ILMN_217777	OLFR362	NM_147051.1	NM_147051.1		259053	22128848	NM_147051.1	Olfr362	NP_667262.1	ILMN_1248544	006860670	S	658	GTACTTTCCTATGCCCGAATTGGGATCACCATCTTACGATTGCCTTCAGC	2	-	36960461-36960510	2qB	Mus musculus olfactory receptor 362 (Olfr362), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123778; MGC123851; MOR158-1; MGC123777	MGC123778; MGC123851; MOR158-1; MGC123777
Mus musculus	Riken	ILMN_206934	ILMN_206934	D430021H21RIK	ri|D430021H21|PX00194M17|AK084982|1526					AK084982	D430021H21Rik		ILMN_2583792	004810537	S	977	AGCACCCCATAGTGACGGGAGATGGGCGAGGGCCGGACAAGAACAGAGAT										
Mus musculus	Riken	ILMN_205600	ILMN_205600	A230075C01RIK	ri|A230075C01|PX00129F15|AK038916|3262					AK038916	A230075C01Rik		ILMN_2573801	002750739	S	2791	GCTGCGTTACCTGGCGGCTGAGGAGAAAGAAACAGTGAGAACTGAGCAGC										
Mus musculus	RefSeq	ILMN_201430	ILMN_329237	LOC670593	XM_001475988.1	XM_001475988.1		670593	149258865	XM_001475988.1	LOC670593	XP_001476038.1	ILMN_1232490	001030594	S	19	TATGGTGCCCAGACAATGAACATCCCCAGAAGGAGACGCTGGTACACCCG	8	-	71977227-71977276	8qB3.3	PREDICTED: Mus musculus similar to ankyrin repeat domain 26 (LOC670593), mRNA.					
Mus musculus	Riken	ILMN_206218	ILMN_206218	C030038O19RIK	ri|C130088H06|PX00172E17|AK081939|2520					AK081939	C030038O19Rik		ILMN_1252318	006330139	S	2217	GTGTATGGAACATGGGGTATGGTCCTTTGGGTGTGGGCGTTTAGCAGAGG										
Mus musculus	RefSeq	ILMN_219878	ILMN_257391	4930553J12RIK	XM_489601.3	XM_489601.3		75351	94400669	XM_489601.3	4930553J12Rik	XP_489601.1	ILMN_1219685	005490441	S	355	CAGCAACGGTTTCTCCCAGGATTATGGATCTAGAAGATGCTACATCATGG				16qC3.3	PREDICTED: Mus musculus RIKEN cDNA 4930553J12 gene (4930553J12Rik), mRNA.					
Mus musculus	MEEBO	ILMN_208644	ILMN_208644	BID	scl28454.8.81_19	NM_007544.2			31542227	NM_007544.2	Bid		ILMN_2757287	002940039	S	2186	GTGTAGCTCACCTTCCTGGGGGAAGGCATCCACAAACCTGTCATCTCACA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_212403	ILMN_212403	SRP19	NM_025527.2	NM_025527.2		66384	142365535	NM_025527.2	Srp19	NP_079803.1	ILMN_2626028	006560343	S	602	TGAAATAAGTTTACATCAGAAGTTTGCATCCAGCTTTTATAACTGTAAGA	18	+	34490939-34490988	18qB1	Mus musculus signal recognition particle 19 (Srp19), mRNA.	A complex of protein and RNA which facilitates translocation of proteins across membranes [goid 48500] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with 7S RNA, the RNA component of the signal recognition particle (SRP) [goid 8312] [evidence IEA]	2310020D23Rik	2310020D23Rik
Mus musculus	RefSeq	ILMN_212403	ILMN_212403	SRP19	NM_025527.2	NM_025527.2		66384	142365535	NM_025527.2	Srp19	NP_079803.1	ILMN_2757224	006590037	S	94	CCCGCTTATTTAAATAATAAGAAGACCATAGCTGAGGGGAGACGGATCCC	18	+	34486341-34486390	18qB1	Mus musculus signal recognition particle 19 (Srp19), mRNA.	A complex of protein and RNA which facilitates translocation of proteins across membranes [goid 48500] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with 7S RNA, the RNA component of the signal recognition particle (SRP) [goid 8312] [evidence IEA]	2310020D23Rik	2310020D23Rik
Mus musculus	RefSeq	ILMN_192564	ILMN_325378	4932422M17RIK	XM_001473799.1	XM_001473799.1		74366	149254559	XM_001473799.1	4932422M17Rik	XP_001473849.1	ILMN_1236460	003460035	S	2792	CCAGCCAATTACCTACCCACGGCCAAATTACAAACCCCGAAAAGAGCCCC	5	+	123591183-123591232	5qF	PREDICTED: Mus musculus RIKEN cDNA 4932422M17 gene (4932422M17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_186819	ILMN_254736	TTLL7	XM_991015.2	XM_991015.2		70892	149251926	XM_991015.2	Ttll7	XP_996109.2	ILMN_1220239	001570037	S	2690	CGCCTACTCTGGAGTCATGGCCAAGGACTGTGGAGCTGTTTCTGTGATTC				3qH2	PREDICTED: Mus musculus tubulin tyrosine ligase-like family, member 7, transcript variant 2 (Ttll7), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]		
Mus musculus	Riken	ILMN_204364	ILMN_204364	C430015M08RIK	ri|C430015M08|PX00078N17|AK049476|1739					AK049476	C430015M08Rik		ILMN_1236202	004390768	S	1442	GAGACCCCCCTATGCTTGACTGCCAGAAAGAGGTGATAGGTTGGAGAAGC										
Mus musculus	RefSeq	ILMN_194035	ILMN_194035	UBE1C	NM_011666.1	NM_011666.1		22200	6755920	NM_011666.1	Ube1c	NP_035796.1	ILMN_2879517	005810661	S	1170	GTCTCCGGCTATCACAGCCACATTAGAGGGGAAGAACAGGACACTTTACT	6	-	97135481-97135530	6qD3	Mus musculus ubiquitin-activating enzyme E1C (Ube1c), mRNA.				AW546539; AI256736; UBA3; AI848246	AW546539; AI256736; UBA3; AI848246
Mus musculus	RefSeq	ILMN_199786	ILMN_199786	LOC383012	XM_356799.1	XM_356799.1			38077317	XM_356799.1	LOC383012		ILMN_1247624	005860632	S	158	CAGAGATGCTCCTACTGTCAACGGAACTCTATGCTGATCACGCCAGGTCG										
Mus musculus	RefSeq	ILMN_214955	ILMN_214955	SCD4	NM_183216.3	NM_183216.3		329065	118130727	NM_183216.3	Scd4	NP_899039.2	ILMN_1259674	006400408	S	2561	GCTTTGCAAAGAGAGAGAGCTCTGAGAACACATTGTGCTGTGGGGGCTCC	19	+	44420722-44420771	19qC3	Mus musculus stearoyl-coenzyme A desaturase 4 (Scd4), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IDA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	ACOD4; MGC48154	ACOD4; MGC48154
Mus musculus	RefSeq	ILMN_214955	ILMN_214955	SCD4	NM_183216.3	NM_183216.3		329065	118130727	NM_183216.3	Scd4	NP_899039.2	ILMN_2653871	000780373	S	129	CTGCCTTCACAAGAGGATCTAGGCTTCCAAGGAGCAAGATGACGGCCCAC	19	+	44407944-44407981:44407982-44407993	19qC3	Mus musculus stearoyl-coenzyme A desaturase 4 (Scd4), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IDA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	ACOD4; MGC48154	ACOD4; MGC48154
Mus musculus	RefSeq	ILMN_222055	ILMN_222055	E2F5	NM_007892.2	NM_007892.2		13559	31982404	NM_007892.2	E2f5	NP_031918.2	ILMN_2743953	004670164	S	1218	CTAAGTATTTAAAATTATGAATGTAACACCTTTTTAGTTCACTGATTCTG	3	+	14605778-14605827	3qA1	Mus musculus E2F transcription factor 5 (E2f5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence TAS]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	E2F-5; AU024671	E2F-5; AU024671
Mus musculus	RefSeq	ILMN_222055	ILMN_222055	E2F5	NM_007892.2	NM_007892.2		13559	31982404	NM_007892.2	E2f5	NP_031918.2	ILMN_2953596	001260093	S	1606	AAGCCTATCAGTTTGTTGACTTCTGACATTCCACTTTCCTAGAGTACAGG	3	+	14606166-14606215	3qA1	Mus musculus E2F transcription factor 5 (E2f5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence TAS]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	E2F-5; AU024671	E2F-5; AU024671
Mus musculus	RefSeq	ILMN_222605	ILMN_249129	NLRP14	NM_001002894.1	NM_001002894.1		76858	50872154	NM_001002894.1	Nlrp14	NP_001002894.1	ILMN_1240686	000620132	S	2882	GCCCTTGATCATGAATCAATTAAGAATCTATGTAAAGTCTTGAGATCTCC	7	+	114340758-114340807	7qE3	Mus musculus NLR family, pyrin domain containing 14 (Nlrp14), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921520L01Rik; Nalp-iota; Nalp14; Nalp14l; GC-LRR	4921520L01Rik; Nalp-iota; Nalp14; Nalp14l; GC-LRR
Mus musculus	RefSeq	ILMN_249129	ILMN_249129	NLRP14	NM_001002894.1	NM_001002894.1		76858	50872154	NM_001002894.1	Nlrp14	NP_001002894.1	ILMN_2809768	004670731	S	3169	TGTCCAGAAGCACTGAACTGCACTCAGTAGGGGTAGGTTGCTCACGTCTC	7	+	114341504-114341553	7qE3	Mus musculus NLR family, pyrin domain containing 14 (Nlrp14), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921520L01Rik; Nalp-iota; Nalp14; Nalp14l; GC-LRR	4921520L01Rik; Nalp-iota; Nalp14; Nalp14l; GC-LRR
Mus musculus	RefSeq	ILMN_212736	ILMN_212736	2410166I05RIK	NM_029759.2	NM_029759.2		76824	31981353	NM_029759.2	2410166I05Rik	NP_084035.1	ILMN_2629718	000460390	S	510	TGAGCTCAGCCACCTGCGCAGCCAGATCGCTAAAATCGTGGCGGCAGACG	4	-	133802354-133802403	4qD3	Mus musculus RIKEN cDNA 2410166I05 gene (2410166I05Rik), mRNA.				AI480750	AI480750
Mus musculus	MEEBO	ILMN_195595	ILMN_195595	SCL0001651.1_229	scl0001651.1_229	AK002569.1			12832645	AK002569.1	scl0001651.1_229		ILMN_1220845	000110360	S	20	CAGATCCTGCTAACGCTCAAGCTCACACACTAACCACACTGCCCTACTCC										
Mus musculus	MEEBO	ILMN_214066	ILMN_214066	DEFB40	scl15671.2.1_26	NM_183039.1			33942125	NM_183039.1	Defb40		ILMN_2643867	006270202	S	103	ACTGTCACATTCAGAAATGCCCATGGTTTTTACTTCAAGTTAGCACCTGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	RefSeq	ILMN_210890	ILMN_210890	ARL4C	NM_177305.3	NM_177305.3		320982	113461999	NM_177305.3	Arl4c	NP_796279.2	ILMN_1232537	006560743	S	3522	GGGTGCAGTTGACTGTTAGTAGTTGTGCAGTAAAGTCAAGCCCTGTGGTG	1	-	90595195-90595244	1qD	Mus musculus ADP-ribosylation factor-like 4C (Arl4c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	LAK; Arl7; A630084M22Rik	LAK; Arl7; A630084M22Rik
Mus musculus	RefSeq	ILMN_210890	ILMN_210890	ARL4C	NM_177305.3	NM_177305.3		320982	113461999	NM_177305.3	Arl4c	NP_796279.2	ILMN_2997406	006480044	S	1093	GAAGAAGCGGTAATGCGCTAGAGCAGCGATCTGGAGCAAGGCTGAGCGAG	1	-	90597624-90597660:90597661-90597673	1qD	Mus musculus ADP-ribosylation factor-like 4C (Arl4c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	LAK; Arl7; A630084M22Rik	LAK; Arl7; A630084M22Rik
Mus musculus	RefSeq	ILMN_218830	ILMN_228455	HCFC2	NM_001081218.1	NM_001081218.1		67933	124487040	NM_001081218.1	Hcfc2	NP_001074687.1	ILMN_2700765	006370273	S	1850	TCTTGTTCCAGGAACAGTATATAAGTTCAGGGTTGCTGCGATCAATGGCT	10	+	82201071-82201120	10qC1	Mus musculus host cell factor C2 (Hcfc2), mRNA.				1700129L13Rik; AU019838	1700129L13Rik; AU019838
Mus musculus	RefSeq	ILMN_216467	ILMN_216467	LCE1B	NM_026822.1	NM_026822.1		68720	13386169	NM_026822.1	Lce1b	NP_081098.1	ILMN_2872965	001260358	S	508	CAAGCTGTGGAGAAGTGCTACTGCCTGCCATTCCTTTCTGTTGTGCTTTG	3	-	92459661-92459710	3qF1	Mus musculus late cornified envelope 1B (Lce1b), mRNA.				Sprrl5; 1110029C13Rik	Sprrl5; 1110029C13Rik
Mus musculus	RefSeq	ILMN_201144	ILMN_234956	GM1467	XM_914718.2	XM_914718.2		384866	94384361	XM_914718.2	Gm1467	XP_919811.2	ILMN_1251860	002370491	S	767	CCCACGACCCCAGTGAGGAATGGGTACTAGCTGGCTTGAAGATGAGCGAT				8qD3	PREDICTED: Mus musculus gene model 1467, (NCBI) (Gm1467), mRNA.					
Mus musculus	MEEBO	ILMN_212813	ILMN_212813	D930038M13RIK	scl0320712.8_2	NM_178790.2			31341860	NM_178790.2	D930038M13Rik		ILMN_1226761	002320424	S	2344	AGCTCTCACACAGATGTTTTCTAATTCACCCTGTTCAGGGCTTTGCTTGG										
Mus musculus	RefSeq	ILMN_213664	ILMN_213664	TMEM218	NM_025464.2	NM_025464.2		66279	31981293	NM_025464.2	Tmem218	NP_079740.1	ILMN_2981896	004670653	S	727	TTGGGGAAAAGGAGTTTTGGGCTTTGTTATCCAACAGAAGAAGCCGGCCC	9	+	37030503-37030552	9qA4	Mus musculus transmembrane protein 218 (Tmem218), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AV004931	AV004931
Mus musculus	RefSeq	ILMN_213664	ILMN_213664	TMEM218	NM_025464.2	NM_025464.2		66279	31981293	NM_025464.2	Tmem218	NP_079740.1	ILMN_2639402	002970091	S	502	TTCAGACCAGAGGGATAACTATTTGTCACTAAGGCAAACCTCCTGAGCCC	9	+	37030278-37030327	9qA4	Mus musculus transmembrane protein 218 (Tmem218), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AV004931	AV004931
Mus musculus	RefSeq	ILMN_257311	ILMN_257311	TMEM77	NM_026013.2	NM_026013.2		67171	70980524	NM_026013.2	Tmem77	NP_080289.1	ILMN_3051608	003290025	I	686	CAGCAAACAAGTCTTCTGGGTCCGACTACTGTTGGTTATCTGGTGTGGAG	3	+	106373724-106373773	3qF2.3	Mus musculus transmembrane protein 77 (Tmem77), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610318G18Rik; AI647667; 2010305N14Rik	2610318G18Rik; AI647667; 2010305N14Rik
Mus musculus	RefSeq	ILMN_257311	ILMN_257311	TMEM77	NM_026013.2	NM_026013.2		67171	70980524	NM_026013.2	Tmem77	NP_080289.1	ILMN_3127932	001440639	A	1805	CAGCTGATGACATTGTTCAGTAGTGTAAATTACTTGCTGCTAACCCTGAC	3	+	106377371-106377420	3qF2.3	Mus musculus transmembrane protein 77 (Tmem77), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610318G18Rik; AI647667; 2010305N14Rik	2610318G18Rik; AI647667; 2010305N14Rik
Mus musculus	RefSeq	ILMN_192551	ILMN_257311	TMEM77	NM_026013.2	NM_026013.2		67171	70980524	NM_026013.2	Tmem77	NP_080289.1	ILMN_1224589	004920494	S	1409	CCATGGCACACCGTAATCAGCATTGGTAACCAAATCATTTGGAATCACGG	3	+	106376975-106377024	3qF2.3	Mus musculus transmembrane protein 77 (Tmem77), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610318G18Rik; AI647667; 2010305N14Rik	2610318G18Rik; AI647667; 2010305N14Rik
Mus musculus	RefSeq	ILMN_196984	ILMN_196984	LOC217645	XM_138137.3	XM_138137.3			38050544	XM_138137.3	LOC217645		ILMN_1238183	007550152	S	855	GGAGCTGAGAAAGGACATGAACCAGCTCTTCCACAGGAAAGGGAGCACCC										
Mus musculus	Riken	ILMN_206445	ILMN_206445	RELN	ri|C230058A22|PX00175P20|AK082508|3426					AK082508	Reln		ILMN_1235727	004040370	S	3048	GACACTGGTTCAAATACTTTGCCATCTCCCAGCACTGACTGCGCCTCCTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the spinal cord [goid 21511] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration [goid 21800] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of small GTPase mediated signal transduction [goid 51057] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine/tyrosine = ADP + protein serine/threonine/tyrosine phosphate [goid 4712] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209722	ILMN_209722	POLE	NM_011132.1	NM_011132.1		18973	6755123	NM_011132.1	Pole	NP_035262.1	ILMN_2598548	004060441	S	6765	CCAGAACATTGCCAAGTACTACAGCATGTCATATCTCCAGGAGACCATAG	5	+	110766177-110766226	5qF	Mus musculus polymerase (DNA directed), epsilon (Pole), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191604	ILMN_259546	BDP1	XM_914676.2	XM_914676.2		544971	94395557	XM_914676.2	Bdp1	XP_919769.1	ILMN_2597548	002450736	S	2626	CAAACGGAAACAAGTCCCAGTTCTAAGGACTAGATTCCAGAAACCAAAAC				13qD1	PREDICTED: Mus musculus B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB, transcript variant 7 (Bdp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISA]		
Mus musculus	RefSeq	ILMN_206622	ILMN_259546	BDP1	XM_914676.2	XM_914676.2		544971	94395557	XM_914676.2	Bdp1	XP_919769.1	ILMN_1218148	005690168	S	7956	CGTAGTGCTGGCACACTGGGAGCTTGATTGTGCTTAACATTTGCTGCCCT				13qD1	PREDICTED: Mus musculus B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB, transcript variant 7 (Bdp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISA]		
Mus musculus	RefSeq	ILMN_235449	ILMN_235449	LOC384806	NM_001009548.1	NM_001009548.1		384806	57222285	NM_001009548.1	LOC384806	NP_001009548.1	ILMN_2967843	007210372	S	2063	GCCCTCCACCTGGAGAAGAGGAATCCCAGCAACATATGGACCTGGTACTG	8	+	41882271-41882320	8qA4	Mus musculus similar to testase-8 (LOC384806), mRNA.				Adam38; testase-8	Adam38; testase-8
Mus musculus	RefSeq	ILMN_201112	ILMN_235449	LOC384806	NM_001009548.1	NM_001009548.1		384806	57222285	NM_001009548.1	LOC384806	NP_001009548.1	ILMN_1243285	000460128	S	2197	GAGGAACCCACTGTTTCCACTTCCAAGGAGGAAGAAGAGAGCCATGTGGC	8	+	41882405-41882454	8qA4	Mus musculus similar to testase-8 (LOC384806), mRNA.				Adam38; testase-8	Adam38; testase-8
Mus musculus	RefSeq	ILMN_217294	ILMN_217294	EIF5	NM_173363.4	NM_173363.4		217869	124430533	NM_173363.4	Eif5	NP_775539.1	ILMN_3072536	005490114	I	422	GTCAGAGACCGAGAACTCTTGCAGTCGTTTATGTCATCCCTTCTTCTCCA	12	+	112777707-112777756	12qF1	Mus musculus eukaryotic translation initiation factor 5 (Eif5), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D12Ertd549e; MGC36509; MGC36374; 2810011H21Rik	D12Ertd549e; MGC36509; MGC36374; 2810011H21Rik
Mus musculus	RefSeq	ILMN_217294	ILMN_217294	EIF5	NM_173363.4	NM_173363.4		217869	124430533	NM_173363.4	Eif5	NP_775539.1	ILMN_3151345	005720468	A	3616	CACTTAGGAAGGTCTTGGGCTTCTGTTCATTCTGGTGCCAAACCAGTGGG	12	+	112784614-112784663	12qF1	Mus musculus eukaryotic translation initiation factor 5 (Eif5), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D12Ertd549e; MGC36509; MGC36374; 2810011H21Rik	D12Ertd549e; MGC36509; MGC36374; 2810011H21Rik
Mus musculus	MEEBO	ILMN_188871	ILMN_188871	LRAT	scl22022.2_267				12963752	NM_023624	Lrat		ILMN_2653227	006280332	S	2287	GACCTGTGTGGGCTGCAGCACAATACTGTCTGCTGTCTGTTAACTGTCAA						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways involving any of the vitamin A compounds, retinol, retinal (retinaldehyde) and retinoic acid, all of which are derivatives of beta-carotene [goid 6776] [evidence IDA]; The chemical reactions and pathways involving lecithin, any 3-sn-phosphatidylcholine [goid 6653] [evidence TAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: retinol-[cellular-retinol-binding-protein] + phosphatidylcholine = retinyl-ester-[cellular-retinol-binding-protein] + 2-acylglycerophosphocholine [goid 47173] [evidence IEA]; Catalysis of the transfer of an acyl group to an oxygen atom on the acceptor molecule [goid 8374] [evidence IDA]		
Mus musculus	RefSeq	ILMN_234655	ILMN_234655	GPR112	NM_001033327.1	NM_001033327.1		236798	85701815	NM_001033327.1	Gpr112	NP_001028499.1	ILMN_2856383	003990095	S	452	GCCTCACCTGGGGCTTTGCCTTTTTTGCCTGGGGACCTGTGAGGATCTTC	X	+	53315099-53315148	XqA5	Mus musculus G protein-coupled receptor 112 (Gpr112), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gm367; PGR17	Gm367; PGR17
Mus musculus	RefSeq	ILMN_221526	ILMN_221526	BC026374	NM_146213.1	NM_146213.1		234677	22122766	NM_146213.1	BC026374	NP_666325.1	ILMN_2736768	001940301	S	2068	ATTATCTAATGACCTATAACCAAGCCAGGGCCTTTCATCCCCCGCCCCAC	8	+	107673644-107673693	8qD3	Mus musculus cDNA sequence BC026374 (BC026374), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC31116	MGC31116
Mus musculus	RefSeq	ILMN_222313	ILMN_222313	MCTS1	NM_026902.3	NM_026902.3		68995	146141149	NM_026902.3	Mcts1	NP_081178.1	ILMN_1215810	003990332	S	423	GTACTCAGTGGAGCAAATATCATGTGTCCTGGCTTAACTTCTCCCGGAGC				XqA3.3	Mus musculus malignant T cell amplified sequence 1 (Mcts1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MCT-1; 1500019M23Rik	MCT-1; 1500019M23Rik
Mus musculus	RefSeq	ILMN_218883	ILMN_218883	SPHK2	NM_020011.3	NM_020011.3		56632	31981069	NM_020011.3	Sphk2	NP_064395.2	ILMN_2718789	003800504	S	2738	GCTTCTTCAGCTTATTGACCAGCCAGGGTTTCTTCTTGCCTACTCCGGTG	7	-	45578507-45578556	7qB4	Mus musculus sphingosine kinase 2 (Sphk2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol [goid 6669] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence NAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The chemical reactions and pathways involving sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues [goid 6670] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the reaction: ATP + sphinganine = ADP + sphinganine 1-phosphate [goid 8481] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the reaction: sphingosine + ATP = sphingosine 1-phosphate + ADP [goid 17050] [evidence IDA]; Catalysis of the reaction: sphingosine + ATP = sphingosine 1-phosphate + ADP [goid 17050] [evidence IMP]	C76851; MGC102297	C76851; MGC102297
Mus musculus	Riken	ILMN_205241	ILMN_205241	E230037D14RIK	ri|E230037D14|PX00210B15|AK054230|1557					AK054230	E230037D14Rik		ILMN_1253930	006100427	S	1443	TCTGAGCTCTCTGAACTCCTAGTTCCAGTCTGGGGCTGTGCCAAAGATGC										
Mus musculus	RefSeq	ILMN_197500	ILMN_197500	LOC380903	XM_354816.1	XM_354816.1			38076303	XM_354816.1	LOC380903		ILMN_2528348	002100639	S	393	CCCCTTAGCTCAACCACCCACCTCTGAGAAAGATGCCCAGAACAAGACGG										
Mus musculus	RefSeq	ILMN_211425	ILMN_211425	COLEC12	NM_130449.1	NM_130449.1		140792	18485493	NM_130449.1	Colec12	NP_569716.1	ILMN_2711663	006380553	S	1821	TCCAGGCCCCTCAGGAGCAATGGAGCCATTGGCTCTGCAGAATGAACCAA	18	+	9858961-9859010	18qA1	Mus musculus collectin sub-family member 12 (Colec12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence ISS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with low-density lipoprotein, one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 30169] [evidence ISS]; Combining with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity. Such molecular patterns are sometimes associated with potential pathogens [goid 8329] [evidence ISS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]	CL-P1; Scara4; SRCL	CL-P1; Scara4; SRCL
Mus musculus	RefSeq	ILMN_211425	ILMN_211425	COLEC12	NM_130449.1	NM_130449.1		140792	18485493	NM_130449.1	Colec12	NP_569716.1	ILMN_1257219	004890707	S	3026	GTACACTGGCTCTGTGTAAACAGTGTGTTTCTAAAATCCCAAATGTAGGA	18	+	9877726-9877775	18qA1	Mus musculus collectin sub-family member 12 (Colec12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence ISS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with low-density lipoprotein, one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 30169] [evidence ISS]; Combining with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity. Such molecular patterns are sometimes associated with potential pathogens [goid 8329] [evidence ISS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]	CL-P1; Scara4; SRCL	CL-P1; Scara4; SRCL
Mus musculus	MEEBO	ILMN_224209	ILMN_224209	OLFR1404	scl14326.1.1_46				22203800	NM_146881	Olfr1404		ILMN_2776630	006510370	S	607	GTCAGCGTGTTTGTTCTTATTCTACCAATGGGCGTGGTCTTCATCTCCTA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_221453	ILMN_221453	STX16	NM_172675.3	NM_172675.3		228960	146198558	NM_172675.3	Stx16	NP_766263.1	ILMN_2735822	002360561	S	2292	GAGTGATTGTTGTATAACTGTTGACGGCTTGAAAAAACTCTCTGTGTCTC				2qH4	Mus musculus syntaxin 16 (Stx16), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	AI648908; AW553605; 6330500A18Rik; 5430410K23Rik; Syn16; 4930401D03	AI648908; AW553605; 6330500A18Rik; 5430410K23Rik; Syn16; 4930401D03
Mus musculus	RefSeq	ILMN_210988	ILMN_210988	CBX8	NM_013926.1	NM_013926.1		30951	7304946	NM_013926.1	Cbx8	NP_038954.1	ILMN_1232016	000060192	S	1038	CCCCTCTCTGACTAACCTGGAGAAAGTGGTCGTTACAGATGTGACCTCAA	11	-	118900055-118900104	11qE2	Mus musculus chromobox homolog 8 (Drosophila Pc class) (Cbx8), mRNA.	A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	Pc3	Pc3
Mus musculus	MEEBO	ILMN_223897	ILMN_223897	H2-Q8	scl015019.3_96				24475670	NM_023124	H2-Q8		ILMN_2771182	002850717	S	279	AGACACAGATCGCCAAGGGCCATGAGCAGAGTTTCCGAGGGAGCCTGAGG						A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]			
Mus musculus	RefSeq	ILMN_218381	ILMN_218381	CHMP2A	NM_026885.2	NM_026885.2		68953	142367036	NM_026885.2	Chmp2a	NP_081161.1	ILMN_1240683	002810202	S	226	CGAGCCATGAGAGAACTGGACAGGGAACGACAGAAACTAGAAACCCAGGA	7	-	13619226-13619275	7qA1	Mus musculus chromatin modifying protein 2A (Chmp2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1500016L11Rik	1500016L11Rik
Mus musculus	RefSeq	ILMN_218381	ILMN_218381	CHMP2A	NM_026885.2	NM_026885.2		68953	142367036	NM_026885.2	Chmp2a	NP_081161.1	ILMN_2694998	000540156	S	53	GCTTCGGAGGGGTAGAGGCGTGACCCGGAAGCGGAAACCCATCGTTCTCT	7	-	13619991-13620040	7qA1	Mus musculus chromatin modifying protein 2A (Chmp2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1500016L11Rik	1500016L11Rik
Mus musculus	RefSeq	ILMN_184191	ILMN_240346	LRPAP1	NM_013587.2	NM_013587.2		16976	63999379	NM_013587.2	Lrpap1	NP_038615.2	ILMN_2761472	001770747	S	1307	GTACCGCTACCAGTGAGATAGGACTGGACTCCGAGCTGCAGCACAACAGT	5	-	35435705-35435754	5qB2	Mus musculus low density lipoprotein receptor-related protein associated protein 1 (Lrpap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISA]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISO]	AA617339; AU042172; RAP; HBP44; C77774; AI790446	AA617339; AU042172; RAP; HBP44; C77774; AI790446
Mus musculus	RefSeq	ILMN_187654	ILMN_242486	PM20D1	NM_178079.2	NM_178079.2		212933	142375855	NM_178079.2	Pm20d1	NP_835180.1	ILMN_1260303	006580152	S	3183	CCGGCTGGGGCTTGCTTTTGTAGGGTTATTAGGATTAGACAAGGAATGGG	1	+	133714341-133714390	1qE4	Mus musculus peptidase M20 domain containing 1 (Pm20d1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	MGC159098; AI098026	MGC159098; AI098026
Mus musculus	RefSeq	ILMN_221496	ILMN_221496	ADAM24	NM_010086.3	NM_010086.3		13526	142384630	NM_010086.3	Adam24	NP_034216.2	ILMN_1218770	004590403	S	2674	CCACACAGCATCCTGGTGTGAGAGATCCTAATGTGTATTATAAACCACTG	8	+	41767357-41767406	8qA4	Mus musculus a disintegrin and metallopeptidase domain 24 (testase 1) (Adam24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence ISS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence ISS]	Dtgn5	Dtgn5
Mus musculus	RefSeq	ILMN_214438	ILMN_214438	DNAJC13	XM_135146.8	XM_135146.8		235567	94386518	XM_135146.8	Dnajc13	XP_135146.8	ILMN_1239858	004760176	S	7679	AAATCTTATCCCAGAGCAGGGCGCCTCTCTCTCCTGCACCAGGTCTCCAT	9	-	104010244-104010293		PREDICTED: Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 13, transcript variant 1 (Dnajc13), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_185912	ILMN_185912	SCL0003154.1_1	scl0003154.1_1	AY221619.1			29569587	AY221619.1	scl0003154.1_1		ILMN_2431056	004920019	S	14	CGAGTACCCTGTCATCGGTTACACACAGCAGATGCTCATTGGCTCCTTAG										
Mus musculus	MEEBO	ILMN_212309	ILMN_212309	CTAG3	scl44076.5.1_97	XM_356655.1			38074415	XM_356655.1	Ctag3		ILMN_2624962	007040241	S	988	TTACCTCACCGTGGTCTCCAGCTGGCATCTTCAAGGGAAGTGGGCCTCAG										
Mus musculus	Riken	ILMN_205829	ILMN_205829	A530059G24RIK	ri|A530059G24|PX00142I20|AK041004|3102					AK041004	A530059G24Rik		ILMN_2575530	004150435	S	2946	TCCATGCCCTGAAAAGTCGTGGCTAGCTCATGCTTTGCTACTGAGCAGCC										
Mus musculus	RefSeq	ILMN_214136	ILMN_214136	WBSCR28	NM_029681.2	NM_029681.2		76629	142369449	NM_029681.2	Wbscr28	NP_083957.1	ILMN_2644651	000630139	S	813	ATCCCAGGAGACCTCGGGGCCCCCGCCTCAGTTCTTAATTCCAGAATCCT	5	-	135377533-135377582	5qG2	Mus musculus Williams-Beuren syndrome chromosome region 28 (human) (Wbscr28), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700111I05Rik; MGC141057	1700111I05Rik; MGC141057
Mus musculus	RefSeq	ILMN_212287	ILMN_212287	ANKRD10	NM_133971.1	NM_133971.1		102334	19527191	NM_133971.1	Ankrd10	NP_598732.1	ILMN_2624749	003390450	S	1869	GGATGTTGCTGTTTGTAGGAACTGTCGGGTCAGAATATTTTACTATGGTG	8	-	11611885-11611934	8qA1.1	Mus musculus ankyrin repeat domain 10 (Ankrd10), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4833425P12Rik; AW549277	4833425P12Rik; AW549277
Mus musculus	MEEBO	ILMN_193102	ILMN_193102	4930554P06RIK	scl29244.1_0						4930554P06Rik		ILMN_1246923	003370437	S	17	CGAATTTCAGGTTTAAGTACCCATCAATGCTGCACGCAACTTGAGCTAGC										
Mus musculus	RefSeq	ILMN_250287	ILMN_250287	SHISA3	NM_001033415.2	NM_001033415.2		330096	142361251	NM_001033415.2	Shisa3	NP_001028587.1	ILMN_3161253	001580025	S	1189	CAGCAGGAGCCCCCATTACCTGGGAAGAGCTGTCCAGATTTCAGTTCCAG	5	+	68002661-68002710	5qC3.1	Mus musculus shisa homolog 3 (Xenopus laevis) (Shisa3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		mShisa3	mShisa3
Mus musculus	RefSeq	ILMN_251778	ILMN_251778	LRFN3	NM_175478.2	NM_175478.2		233067	118130272	NM_175478.2	Lrfn3	NP_780687.1	ILMN_2930680	003520600	S	2773	GGACACCCCTCGGGACCTGGCCTCAGACTCACCAAATTGCTCACGGTTTT	7	-	31140571-31140620	7qB1	Mus musculus leucine rich repeat and fibronectin type III domain containing 3 (Lrfn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SALM4; A530045B06Rik	SALM4; A530045B06Rik
Mus musculus	RefSeq	ILMN_219224	ILMN_219224	MAGEE1	NM_053201.3	NM_053201.3		107528	111378376	NM_053201.3	Magee1	NP_444431.3	ILMN_1220482	003830524	S	3411	GGCTGGCTTCCCTTTTGTCTGCTATTGTGTAAAGAATACTAACGTTTCCC	X	+	102319145-102319194	XqD	Mus musculus melanoma antigen, family E, 1 (Magee1), mRNA.	Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI847422; DAMAGE; mMage-e1	AI847422; DAMAGE; mMage-e1
Mus musculus	Riken	ILMN_206427	ILMN_206427	C230060F13RIK	ri|C230060F13|PX00175B01|AK082536|1093					AK082536	C230060F13Rik		ILMN_1229749	006040019	S	847	CCGGGGCAGCATTAGAGAACCAGCAGCATCAGACCAACCCCCACACTGTA										
Mus musculus	RefSeq	ILMN_218062	ILMN_218062	SCD1	NM_009127.3	NM_009127.3		20249	118130513	NM_009127.3	Scd1	NP_033153.2	ILMN_1237375	003890274	S	4457	CCAGTCAAAGTGCAAGACTACCTACCCACTGCCATGAAAACCATTGCAGG	19	-	44469114-44469163	19qC3	Mus musculus stearoyl-Coenzyme A desaturase 1 (Scd1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Scd-1; AI265570; SCD; AA589638; ab	Scd-1; AI265570; SCD; AA589638; ab
Mus musculus	RefSeq	ILMN_209898	ILMN_261941	DYNLT1	NM_009342.2	NM_009342.2		21648	42476289	NM_009342.2	Dynlt1	NP_033368.1	ILMN_2600246	001050196	S	702	GAAATGATTCAGATACACTAACTTTCCATACTTTATTCTTTCTTAGAATA	17	+	6435375-6435424	17qA1	Mus musculus dynein light chain Tctex-type 1 (Dynlt1), mRNA.				MGC107110; Tctex1; Tctex-1; MGC107111	MGC107110; Tctex1; Tctex-1; MGC107111
Mus musculus	RefSeq	ILMN_213228	ILMN_213228	IL17RE	NM_145826.4	NM_145826.4		57890	146149163	NM_145826.4	Il17re	NP_665825.2	ILMN_2634933	007100020	S	2484	CTTGGGCTTTCCTGATAGGTCCTCAGCCCTTTCTGAGAAGGAGGGACGAT				6qE3	Mus musculus interleukin 17 receptor E (Il17re), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AA589509; IL-17RE	AA589509; IL-17RE
Mus musculus	RefSeq	ILMN_252455	ILMN_213228	IL17RE	NM_145826.4	NM_145826.4		57890	146149163	NM_145826.4	Il17re	NP_665825.2	ILMN_3163006	006480369	A	2260	CTTGAGGCTGCCAAAGATGACTACCAAGGCTCAACCAATAGTCCCTGTGG				6qE3	Mus musculus interleukin 17 receptor E (Il17re), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AA589509; IL-17RE	AA589509; IL-17RE
Mus musculus	RefSeq	ILMN_213228	ILMN_213228	IL17RE	NM_145826.4	NM_145826.4		57890	146149163	NM_145826.4	Il17re	NP_665825.2	ILMN_2748592	004290026	S	116	GTGCAGGTCCCTTTCCTGTTAACTGTGCCACACCAAGAGCCTCCTGTGAC				6qE3	Mus musculus interleukin 17 receptor E (Il17re), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AA589509; IL-17RE	AA589509; IL-17RE
Mus musculus	MEEBO	ILMN_211551	ILMN_211551	4921529N20RIK	scl50592.5_194	XM_128699.1			20900555	XM_128699.1	4921529N20Rik		ILMN_2617023	006590500	S	1000	GAGGATGTGACTGTAAACCCCCCAAAACGCACAGAGAAACTCGGTGTGCA										
Mus musculus	RefSeq	ILMN_191283	ILMN_191283	TSNAXIP1	NM_024445.4	NM_024445.4		72236	146141183	NM_024445.4	Tsnaxip1	NP_077765.1	ILMN_1240576	005820079	S	1922	GAAGACGTGACCCTACTGAAGATGCGTGGGACCCTGATGAACATAGATCC				8qD3	Mus musculus translin-associated factor X (Tsnax) interacting protein 1 (Tsnaxip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC118240; TXI1; 1700016K08Rik	MGC118240; TXI1; 1700016K08Rik
Mus musculus	RefSeq	ILMN_208786	ILMN_208786	NRBP1	NM_147201.2	NM_147201.2		192292	133892152	NM_147201.2	Nrbp1	NP_671734.1	ILMN_1229702	000020139	S	1800	CCCTTCGCGCCCATATTATTTAGGAGGGCTTTAGGGGCTCCCTGGTTGAG	5	+	31553590-31553639	5qB1	Mus musculus nuclear receptor binding protein 1 (Nrbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence ISO]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]	B230344L17Rik; Nrbp; MGC6961	B230344L17Rik; Nrbp; MGC6961
Mus musculus	RefSeq	ILMN_197486	ILMN_197486	LOC381437	XM_355393.1	XM_355393.1			38076219	XM_355393.1	LOC381437		ILMN_1238990	005550424	S	612	GTGCACTAGTGATTCTTCCTCTCCAGAAGAACCGCCATTTACAGGTGTAC										
Mus musculus	RefSeq	ILMN_230951	ILMN_230951	LSM1	NM_026032.1	NM_026032.1		67207	110625666	NM_026032.1	Lsm1	NP_080308.1	ILMN_2919270	006280138	S	2189	CGATTCCCCAGAGCCCTGCGTGTAGCCATGTGCATTCTGAAACTACTGCG	8	+	26914276-26914325	8qA2	Mus musculus LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CASM; 2810025O06Rik	CASM; 2810025O06Rik
Mus musculus	RefSeq	ILMN_203288	ILMN_230951	LSM1	NM_026032.1	NM_026032.1		67207	110625666	NM_026032.1	Lsm1	NP_080308.1	ILMN_2556157	006350139	S	391	CAGACCAGACTGGAGGCAGAGAAGCTGAAGGTCCAGACCCTTAAAGATCG	8	+	26912478-26912527	8qA2	Mus musculus LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CASM; 2810025O06Rik	CASM; 2810025O06Rik
Mus musculus	RefSeq	ILMN_201106	ILMN_230951	LSM1	NM_026032.1	NM_026032.1		67207	110625666	NM_026032.1	Lsm1	NP_080308.1	ILMN_2603984	006580408	S	2234	CTGCGCATGGCTGCTTCAGGCTCTTTTAATGTCTCCCGAGGCCCTTCATA	8	+	26914321-26914370	8qA2	Mus musculus LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CASM; 2810025O06Rik	CASM; 2810025O06Rik
Mus musculus	RefSeq	ILMN_202100	ILMN_230951	LSM1	NM_026032.1	NM_026032.1		67207	110625666	NM_026032.1	Lsm1	NP_080308.1	ILMN_1244979	002570176	S	770	GTCTAAAGAAACAGTGGCGTGACCTCCCTCACACAAGTCACTGTGGAGCC	8	+	26912857-26912906	8qA2	Mus musculus LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CASM; 2810025O06Rik	CASM; 2810025O06Rik
Mus musculus	MEEBO	ILMN_196128	ILMN_196128	SCL0015365.1_6	scl0015365.1_6	BC064076.1			39795499	BC064076.1	scl0015365.1_6		ILMN_2521893	000840477	S	20	GCTGATCACTGCTGAGAGGAGAGGCACAACCAGGAACTTCTCAGGGCATT										
Mus musculus	Riken	ILMN_206506	ILMN_206506	D830013M18RIK	ri|D830013M18|PX00198B24|AK085816|1593					AK085816	D830013M18Rik		ILMN_2580601	005860328	S	900	GCTCTGTGCTGCCGTGGGCAGGGAGCTGACTTCTTTAAGCCTCTATTTCC										
Mus musculus	RefSeq	ILMN_220037	ILMN_259591	EML5	NM_001081191.1	NM_001081191.1		319670	124487110	NM_001081191.1	Eml5	NP_001074660.1	ILMN_2716820	005720470	S	2928	GAACCCCTATGTGCCTGATAAACTAATTACAGCTGGGATTAAACACATGA	12	-	100089609-100089658	12qE	Mus musculus echinoderm microtubule associated protein like 5 (Eml5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC027154; C130068M19Rik	BC027154; C130068M19Rik
Mus musculus	RefSeq	ILMN_208827	ILMN_259591	EML5	NM_001081191.1	NM_001081191.1		319670	124487110	NM_001081191.1	Eml5	NP_001074660.1	ILMN_2694731	003310093	S	8913	GCTAATTCTGTTATCTTTCAATGGAAAGGCAATGACCACAGTAGAAGGCT	12	-	100025987-100026036	12qE	Mus musculus echinoderm microtubule associated protein like 5 (Eml5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC027154; C130068M19Rik	BC027154; C130068M19Rik
Mus musculus	RefSeq	ILMN_259591	ILMN_259591	EML5	NM_001081191.1	NM_001081191.1		319670	124487110	NM_001081191.1	Eml5	NP_001074660.1	ILMN_3114898	006760736	A	6302	GATTTACCAGTGGTGATCGGCATGTTGTCAGTGCTGGAGGCGATGACTGC	12	-	100028824-100028873	12qE	Mus musculus echinoderm microtubule associated protein like 5 (Eml5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC027154; C130068M19Rik	BC027154; C130068M19Rik
Mus musculus	RefSeq	ILMN_203226	ILMN_259591	EML5	NM_001081191.1	NM_001081191.1		319670	124487110	NM_001081191.1	Eml5	NP_001074660.1	ILMN_1214678	007000768	S	860	GGGACTGGAAAAGGGGGAGAATGCTGTCTATGGCTCCAGGTCACACCGAC	12	-	100120188-100120237	12qE	Mus musculus echinoderm microtubule associated protein like 5 (Eml5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC027154; C130068M19Rik	BC027154; C130068M19Rik
Mus musculus	RefSeq	ILMN_188989	ILMN_188989	ZSWIM4	NM_172503.3	NM_172503.3		212168	118130013	NM_172503.3	Zswim4	NP_766091.2	ILMN_2457408	007510240	S	4103	TCTGCATCTCTCTCAAGTCCCAGCTGCTGACAGGCCTTCCTGTATCCCAG	8	-	86735036-86735085	8qC3	Mus musculus zinc finger, SWIM domain containing 4 (Zswim4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	E130119J17Rik; D330002I24	E130119J17Rik; D330002I24
Mus musculus	RefSeq	ILMN_218838	ILMN_313010	LOC100048636	XR_034739.1	XR_034739.1		100048636	149249680	XR_034739.1	LOC100048636		ILMN_2700860	003190661	S	2883	ACTGCAGCTGGCCTCACTGCCCAGAGGGCGTACCCCACCCTCCATCCTTC					PREDICTED: Mus musculus similar to cytosolic phospholipase A2 delta (LOC100048636), misc RNA.					
Mus musculus	RefSeq	ILMN_214114	ILMN_253256	ITFG3	NM_207217.3	NM_207217.3		106581	146198676	NM_207217.3	Itfg3	NP_997100.1	ILMN_2748941	004260022	S	2394	TCGCCTCAGTACACTGTCCCTGCACCCTGGCACAGCGGGCACGTCTCTTT				17qA3.3	Mus musculus integrin alpha FG-GAP repeat containing 3 (Itfg3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI429612	AI429612
Mus musculus	RefSeq	ILMN_200303	ILMN_200303	LOC386182	XM_359107.1	XM_359107.1			38081264	XM_359107.1	LOC386182		ILMN_1252278	005890014	S	361	ACCCAAAGTGAGGCAACACTGGAGATTCTTACACGCGTTCTCACGACCGG										
Mus musculus	RefSeq	ILMN_209579	ILMN_226741	OTUD4	NM_001081164.1	NM_001081164.1		73945	124487190	NM_001081164.1	Otud4	NP_001074633.1	ILMN_2673314	002450255	S	317	GCGCAAACTGGGCTTGTATCGGAAATTGGTCGCCAAGGACGGGTCGTGCT	8	+	82163891-82163940	8qC2	Mus musculus OTU domain containing 4 (Otud4), mRNA.				4930431L18Rik; AI449692; D8Ertd69e; mKIAA1046	4930431L18Rik; AI449692; D8Ertd69e; mKIAA1046
Mus musculus	RefSeq	ILMN_209579	ILMN_226741	OTUD4	NM_001081164.1	NM_001081164.1		73945	124487190	NM_001081164.1	Otud4	NP_001074633.1	ILMN_1245081	005310670	S	6798	GAATCCTGTAAGAGGGGTGGGTGCATGTCTTAATGCTGAGAAGCAGCAGC	8	+	82201128-82201177	8qC2	Mus musculus OTU domain containing 4 (Otud4), mRNA.				4930431L18Rik; AI449692; D8Ertd69e; mKIAA1046	4930431L18Rik; AI449692; D8Ertd69e; mKIAA1046
Mus musculus	RefSeq	ILMN_218989	ILMN_218989	ARPC5	NM_026369.1	NM_026369.1		67771	13385865	NM_026369.1	Arpc5	NP_080645.1	ILMN_1244135	001710500	S	230	GCTGCTCTCCAGGCTGCTCAGAAAAACCCCCCTATTAACACAAAGAGCCA	1	+	154616003-154616052	1qG3	Mus musculus actin related protein 2/3 complex, subunit 5 (Arpc5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	165kDa; 5830443F10Rik; p16-Arc	165kDa; 5830443F10Rik; p16-Arc
Mus musculus	RefSeq	ILMN_218989	ILMN_218989	ARPC5	NM_026369.1	NM_026369.1		67771	13385865	NM_026369.1	Arpc5	NP_080645.1	ILMN_2792809	006590068	S	1594	CCTGAATGTGCGTGGCCGAGAGGGAATCAGCCTGCTTGTCTTTCCCTAAG	1	+	154622516-154622565	1qG3	Mus musculus actin related protein 2/3 complex, subunit 5 (Arpc5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	165kDa; 5830443F10Rik; p16-Arc	165kDa; 5830443F10Rik; p16-Arc
Mus musculus	RefSeq	ILMN_216615	ILMN_218989	ARPC5	NM_026369.1	NM_026369.1		67771	13385865	NM_026369.1	Arpc5	NP_080645.1	ILMN_2673252	002320762	S	1515	GTTGGACAAACCAAATTGATTCTCAAAAAATGACCGGTGCTTGTAAAAAG	1	+	154622437-154622486	1qG3	Mus musculus actin related protein 2/3 complex, subunit 5 (Arpc5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	165kDa; 5830443F10Rik; p16-Arc	165kDa; 5830443F10Rik; p16-Arc
Mus musculus	RefSeq	ILMN_212846	ILMN_315797	LOC100047810	XM_001479337.1	XM_001479337.1		100047810	149259331	XM_001479337.1	LOC100047810	XP_001479387.1	ILMN_1242942	002450358	S	550	GGGTGGAGAACCAAGTTTTCCACATGTGGCGCTTCTACAACTATGCCAGG					PREDICTED: Mus musculus similar to transmembrane emp24 protein transport domain containing 6 (LOC100047810), mRNA.					
Mus musculus	RefSeq	ILMN_196567	ILMN_196567	DEFB15	NM_139222.3	NM_139222.3		246082	110347556	NM_139222.3	Defb15	NP_631968.1	ILMN_2968390	004900161	S	260	GGGACTTGGGGATGAACCTTTGTCCTTTTGTTGTGGCACCTGATGGAAGC	8	-	23040306-23040341:23040342-23040355	8qA2	Mus musculus defensin beta 15 (Defb15), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defb11; mBD-11	Defb11; mBD-11
Mus musculus	RefSeq	ILMN_212599	ILMN_212599	COPS7B	NM_172974.2	NM_172974.2		26895	118129901	NM_172974.2	Cops7b	NP_766562.1	ILMN_1225597	005810068	S	1875	CACTCCTGGCCAGAGAAAAGGACTTGACTAGACTTTCTGAACTTGAACAG	1	+	88502719-88502768	1qD	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana) (Cops7b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	E130114M23; D1Wsu66e	E130114M23; D1Wsu66e
Mus musculus	MEEBO	ILMN_216026	ILMN_216026	SLC7A7	scl000313.1_35				15928461	BC014709	Slc7a7		ILMN_2666464	003420040	S	31	CAGTTGGTTTCAGGGTTGGTTCCTCATACAGGCATCTCAGCGCAGGGACA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185677	ILMN_320902	ZFP467	NM_001085416.1	NM_001085416.1		68910	146134484	NM_001085416.1	Zfp467	NP_001078885.1	ILMN_2429059	000150241	S	2088	TTTATGGGGATCAGCCAGGTCAAGGGGAGATTGACTGAGCAAGAGACCTC				6qB2.3	Mus musculus zinc finger protein 467 (Zfp467), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	EZI; AI426952; 1190001I08Rik; MNCb-3350; AB041616; AV017623	EZI; AI426952; 1190001I08Rik; MNCb-3350; AB041616; AV017623
Mus musculus	RefSeq	ILMN_232603	ILMN_232603	OTTMUSG00000019001	NM_001081648.1	NM_001081648.1		434864	126032330	NM_001081648.1	OTTMUSG00000019001	NP_001075117.1	ILMN_2930971	001030215	S	1457	GTAGAATGAGAAGACCTGAAGACTAAACTGCCTTTTCCTTCGGGCGTTGG	X	+	144658682-144658731	XqF2	Mus musculus predicted gene, OTTMUSG00000019001 (OTTMUSG00000019001), mRNA.				Ott-like	Ott-like
Mus musculus	MEEBO	ILMN_222556	ILMN_222556	PLK4	scl0002048.1_44	NM_173169.1			27501465	NM_173169.1	Plk4		ILMN_2751407	000360671	S	1507	CAGCCAATAGTTAAGGATCTTTTGAAAGACCGTATAATGACTGAGCAGTA							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201066	ILMN_201066	LOC384744	XM_357837.1	XM_357837.1			38088487	XM_357837.1	LOC384744		ILMN_1215451	004230592	S	415	TCGATCACCTTCCCTCACTTTTACCAAGTTCGTAACGAGCTGTTGTCATG										
Mus musculus	RefSeq	ILMN_233946	ILMN_233946	EG434858	NR_002883.1	NR_002883.1		434858	85060509	NR_002883.1	EG434858		ILMN_3013874	000290307	I	10	CTTTGACGCTGCCGAGGAAGCATCGCTGAAGGCTCTTGTAACTCTACCGT	X	+	138732057-138732106	XqF2	Mus musculus predicted gene, EG434858 (EG434858), non-coding RNA.					
Mus musculus	RefSeq	ILMN_233946	ILMN_233946	EG434858	NR_002883.1	NR_002883.1		434858	85060509	NR_002883.1	EG434858		ILMN_3084883	004730612	A	875	CCAATTTTGGGCCGATGAAGCGAGAAAACTTTGGAGGCAGGAGCTCTGGC	X	+	138732922-138732971	XqF2	Mus musculus predicted gene, EG434858 (EG434858), non-coding RNA.					
Mus musculus	Riken	ILMN_206877	ILMN_206877	CYP2D22	ri|D930036L18|PX00203M23|AK086555|897					AK086555	Cyp2d22		ILMN_1237648	000110730	S	559	AGGACCCAAGGTCATGCTGGATTTTCCAAAGGCAACAGCTAGGAGGCGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217357	ILMN_217357	GKAP1	NM_019832.3	NM_019832.3		56278	142383921	NM_019832.3	Gkap1	NP_062806.1	ILMN_2682279	003890082	S	539	GCTGACCTTGAGAAGGCGTTGCTGTTGAGTAAGCTGGAGTATGAAGAGCA	13	-	58360801-58360850	13qB1	Mus musculus G kinase anchoring protein 1 (Gkap1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of guanylyl cyclase and a subsequent increase in the concentration of cyclic GMP [goid 7199] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gkap42; D13Ertd340e; 42kDa; 4933400B15Rik	Gkap42; D13Ertd340e; 42kDa; 4933400B15Rik
Mus musculus	RefSeq	ILMN_218741	ILMN_218741	IGSF21	NM_198610.1	NM_198610.1		230868	38348465	NM_198610.1	Igsf21	NP_941012.1	ILMN_1235388	006860537	S	1578	AGTGCCGAGTTTGACGGGAAGGAGCTTGTGCTGGAGCGGGTTCCTGCCGA	4	-	139584043-139584092	4qD3	Mus musculus immunoglobin superfamily, member 21 (Igsf21), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC67646; BC055811; Gm141	MGC67646; BC055811; Gm141
Mus musculus	RefSeq	ILMN_201399	ILMN_201399	LOC385097	XM_358051.1	XM_358051.1			38093519	XM_358051.1	LOC385097		ILMN_1246804	005810341	S	309	TCCTCTGAGCAGATGCCTGGATGAGACGGCTCGAAGTCCTCCGTCTGAGA										
Mus musculus	RefSeq	ILMN_218818	ILMN_252164	2310045N01RIK	XM_922052.2	XM_922052.2		72368	94383544	XM_922052.2	2310045N01Rik	XP_927145.1	ILMN_1236577	004560204	S	316	CAAACAGGCCATCAGTATCCGGGACCACATGAACACCAGTGCCCAAGGCC				8qB3.3	PREDICTED: Mus musculus RIKEN cDNA 2310045N01 gene, transcript variant 10 (2310045N01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196372	ILMN_196372	5730408A14RIK	XM_148995.1	XM_148995.1			20831561	XM_148995.1	5730408A14Rik		ILMN_2523867	006270341	S	1534	CCCAAAGAATGATGGCAAGTGTGTTCCAAGTAATCAAAGAGGACACAACC										
Mus musculus	RefSeq	ILMN_186359	ILMN_330165	BC025920	XR_035082.1	XR_035082.1		268319	149260887	XR_035082.1	BC025920		ILMN_1254041	005720204	S	1671	ACTTGGAGGACCTGGGAAAACCTTAGCTGTATCACTTCATTTATTTTCTC	10	+	81072362-81072411	10qC1	PREDICTED: Mus musculus cDNA sequence BC025920 (BC025920), misc RNA.					
Mus musculus	RefSeq	ILMN_199022	ILMN_250364	ADAMTS14	NM_001081127.1	NM_001081127.1		237360	124487464	NM_001081127.1	Adamts14	NP_001074596.1	ILMN_1220047	006400041	S	3597	ACAGCTACCAGATGTGGCGGACAGGATCTCCCCAGTGACTCAGTATCCGG	10	-	60661401-60661450	10qB4	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 14 (Adamts14), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IDA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	TS14; Adamts-14	TS14; Adamts-14
Mus musculus	Riken	ILMN_201913	ILMN_201913	RAD54L	ri|4933433M02|PX00021D09|AK017045|1520					AK017045	Rad54l		ILMN_2545576	003800577	S	933	CCCTGGAGTTGGACTTACAGTCATTTGTGATCTGCCCAACATGTGGGTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IGI]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200852	ILMN_243226	EG633570	XM_908002.2	XM_908002.2		633570	94408048	XM_908002.2	EG633570	XP_913095.1	ILMN_1237116	004060719	S	12	TCTACAGTCTCCAAAGAAAGTTGGCGATGACATTGCCAAGGCTACCAGTG				XqD	PREDICTED: Mus musculus predicted gene, EG633570 (EG633570), mRNA.					
Mus musculus	MEEBO	ILMN_188750	ILMN_188750	2810402K13RIK	scl32512.3_58						2810402K13Rik		ILMN_2455390	004390735	S	20	TGCCAGTGTGGATACCAGGCTCATCCCTTGTTTGTCTAGTGCTCTTGGTT										
Mus musculus	RefSeq	ILMN_213684	ILMN_213684	ARHGEF6	NM_152801.1	NM_152801.1		73341	22779884	NM_152801.1	Arhgef6	NP_690014.1	ILMN_2751345	000870092	S	822	GGCACATTAAATGGGAGAACTGGATGGTTCCCTAGTAATTATGTCCGAGA	X	-	54552650-54552699	XqA5	Mus musculus Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 (Arhgef6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	4930592P22Rik; 1700038J06Rik; 1600028C08Rik	4930592P22Rik; 1700038J06Rik; 1600028C08Rik
Mus musculus	RefSeq	ILMN_213684	ILMN_213684	ARHGEF6	NM_152801.1	NM_152801.1		73341	22779884	NM_152801.1	Arhgef6	NP_690014.1	ILMN_2639642	005260035	S	4297	CTCTGGATAAGGAAACTTGTGCAGTGGGCTGCCCATGCTTACACACTAAA	X	-	54484884-54484933	XqA5	Mus musculus Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 (Arhgef6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	4930592P22Rik; 1700038J06Rik; 1600028C08Rik	4930592P22Rik; 1700038J06Rik; 1600028C08Rik
Mus musculus	RefSeq	ILMN_213710	ILMN_213710	RGS13	NM_153171.4	NM_153171.4		246709	146149267	NM_153171.4	Rgs13	NP_694811.1	ILMN_2639953	006060196	S	1311	AATTGGTCTTTTATTGAGATTAATTTCTTCATAATATGGACTCACCATAG				1qF	Mus musculus regulator of G-protein signaling 13 (Rgs13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 45744] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Inhibits signal transduction the GTPase activity of G-protein alpha subunits, thereby driving them into their inactive GDP-bound form [goid 16299] [evidence IDA]		
Mus musculus	RefSeq	ILMN_220683	ILMN_220683	IL2	NM_008366.2	NM_008366.2		16183	31982837	NM_008366.2	Il2	NP_032392.1	ILMN_2725259	006480524	S	471	TCGATGATGAGTCAGCAACTGTGGTGGACTTTCTGAGGAGATGGATAGCC	3	-	37020062-37020111	3qB	Mus musculus interleukin 2 (Il2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence ISO]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence IDA]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence ISO]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat5 protein [goid 42523] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51024] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation [goid 50672] [evidence IMP]; Any process that modulates the frequency, rate or extent of resting T cell proliferation [goid 46013] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptosis [goid 2903] [evidence ISO]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISO]; Interacting selectively with the interleukin-2 receptor [goid 5134] [evidence IDA]; Interacting selectively with the interleukin-2 receptor [goid 5134] [evidence ISO]	Il-2	Il-2
Mus musculus	RefSeq	ILMN_210539	ILMN_210539	C4B	NM_009780.1	NM_009780.1		12268	6753225	NM_009780.1	C4b	NP_033910.1	ILMN_3049559	007510243	I	5236	TTCCTGATGGAGTTCAGCAGCCGGGGGTGCCAGGTGTGAGGCCTTAGGAC	17	-	34872681-34872730	17qB1	Mus musculus complement component 4B (Childo blood group) (C4b), mRNA. XM_921663 XM_921673 XM_921676 XM_921678	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway [goid 6956] [evidence IMP]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ss; C4	Ss; C4
Mus musculus	RefSeq	ILMN_210539	ILMN_210539	C4B	NM_009780.1	NM_009780.1		12268	6753225	NM_009780.1	C4b	NP_033910.1	ILMN_2632567	002350291	S	3219	TTTCGGAAGAATGATGGCTCCTTTGGGGCTTGGTTACACCGGGACAGCAG	17	-	34876692-34876741	17qB1	Mus musculus complement component 4B (Childo blood group) (C4b), mRNA. XM_921663 XM_921673 XM_921676 XM_921678	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway [goid 6956] [evidence IMP]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ss; C4	Ss; C4
Mus musculus	RefSeq	ILMN_210539	ILMN_210539	C4B	NM_009780.1	NM_009780.1		12268	6753225	NM_009780.1	C4b	NP_033910.1	ILMN_2632563	006900441	S	3215	GCAGTTTCGGAAGAATGATGGCTCCTTTGGGGCTTGGTTACACCGGGACA	17	-	34876696-34876745	17qB1	Mus musculus complement component 4B (Childo blood group) (C4b), mRNA. XM_921663 XM_921673 XM_921676 XM_921678	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway [goid 6956] [evidence IMP]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ss; C4	Ss; C4
Mus musculus	RefSeq	ILMN_192369	ILMN_251062	GNE	NM_015828.2	NM_015828.2		50798	31980684	NM_015828.2	Gne	NP_056643.2	ILMN_2682503	002600072	S	2290	CAGCATGGTTCTGGACTACACAACGCGCAGGATCCACTAGGTCTCCCGGG	4	-	44049980-44049989:44049990-44050029	4qB1	Mus musculus glucosamine (Gne), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid [goid 6054] [evidence TAS]; The chemical reactions and pathways involving UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 6047] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria [goid 9103] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine [goid 8761] [evidence IEA]; Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate [goid 9384] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence ISS]	2310066H07Rik; GLCNE; NM; IBM2; Uae1; DMRV	2310066H07Rik; GLCNE; NM; IBM2; Uae1; DMRV
Mus musculus	RefSeq	ILMN_223574	ILMN_223574	CENPA	NM_007681.2	NM_007681.2		12615	118131195	NM_007681.2	Cenpa	NP_031707.1	ILMN_1236574	007200519	S	764	CCCTATGGCTGAAGGTTTCAGACACCCGATACCTGCCATGGTATGGTTAT	5	+	30976626-30976675	5qB1	Mus musculus centromere protein A (Cenpa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]; The region of a condensed chromosome kinetochore closest to centromeric DNA; in mammals the CREST antigens (CENP proteins) are found in this layer; this layer may help define underlying centromeric chromatin structure and position of the kinetochore on the chromosome [goid 939] [evidence IDA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Cenp-A	Cenp-A
Mus musculus	MEEBO	ILMN_215650	ILMN_215650	1700025B11RIK	scl076409.2_9	XM_147929.1			20902710	XM_147929.1	1700025B11Rik		ILMN_2662025	004920270	S	132	AGTGTCGTCATCCCACATATCCAGGACCACCACTGCCTAGCCATTCTGGC										
Mus musculus	MEEBO	ILMN_188808	ILMN_188808	SCL0003499.1_101	scl0003499.1_101						scl0003499.1_101		ILMN_2455892	006130564	S	11	CGCCCATCCTGGCTCCAGACTATCGTTAAGAATGCACAGCCAAATTCTGC										
Mus musculus	RefSeq	ILMN_191960	ILMN_191960	XRCC2	NM_020570.2	NM_020570.2		57434	31543968	NM_020570.2	Xrcc2	NP_065595.2	ILMN_2483748	006980164	S	2715	TGGACAGCCAGTTACTTCAGTAATGCTTCCCTCGGGGTATCATGCTCCCC	5	-	25196286-25196335	5qA3	Mus musculus X-ray repair complementing defective repair in Chinese hamster cells 2 (Xrcc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50769] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	RecA; 8030409M04Rik; RAD51; 4921524O04Rik	RecA; 8030409M04Rik; RAD51; 4921524O04Rik
Mus musculus	RefSeq	ILMN_191960	ILMN_191960	XRCC2	NM_020570.2	NM_020570.2		57434	31543968	NM_020570.2	Xrcc2	NP_065595.2	ILMN_2895630	003830139	S	2831	GCTCCGGCTGCCCTCCTAGTTGCAGGCATTAAAGATGAGTTCTGGTCTGC	5	-	25196170-25196219	5qA3	Mus musculus X-ray repair complementing defective repair in Chinese hamster cells 2 (Xrcc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50769] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	RecA; 8030409M04Rik; RAD51; 4921524O04Rik	RecA; 8030409M04Rik; RAD51; 4921524O04Rik
Mus musculus	MEEBO	ILMN_190232	ILMN_190232	GLYAT	scl53339.6_23				31981840	NM_145935	Glyat		ILMN_1235058	000020521	S	20	GTAACTGCTCTACTATGCAACCGCTTGCACCAAGCTTTGGAAGTGGAGAC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine [goid 47961] [evidence IEA]		
Mus musculus	RefSeq	ILMN_242940	ILMN_242940	TCTE3	NM_198104.2	NM_198104.2		21647	88758585	NM_198104.2	Tcte3	NP_932772.1	ILMN_3086899	006040445	A	197	CCGGCCAAACGCATCAATCCCCGGTGTCTAAGAGAGAAAGGAAGCCTAGC	17	-	15178277-15178326	17qA2	Mus musculus t-complex-associated testis expressed 3 (Tcte3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tctex-4; Tctex4; Tctex2; Tctex-2; D17Leh117c; Tcte-3; LC2	Tctex-4; Tctex4; Tctex2; Tctex-2; D17Leh117c; Tcte-3; LC2
Mus musculus	RefSeq	ILMN_223139	ILMN_223139	TMPRSS11F	NM_178730.3	NM_178730.3		243083	134053910	NM_178730.3	Tmprss11f	NP_848845.1	ILMN_2759828	004810373	S	3813	TTAAAGATCTCAAAAAATGCAGAGTACATTATTGTTAATAGATACCAATA	5	-	86950665-86950714	5qE1	Mus musculus transmembrane protease, serine 11f (Tmprss11f), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	4631408C20; 4732406D01Rik	4631408C20; 4732406D01Rik
Mus musculus	RefSeq	ILMN_211613	ILMN_211613	GRAP	NM_027817.1	NM_027817.1		71520	21362272	NM_027817.1	Grap	NP_082093.1	ILMN_2617656	000510162	S	1076	CGTTGGAAGAGGCCTGATAGGGACAGAGGCAATGTAGTGGGTCCCGTCCT	11	+	61488449-61488498	11qB2	Mus musculus GRB2-related adaptor protein (Grap), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	8430435N19Rik; BB233594	8430435N19Rik; BB233594
Mus musculus	RefSeq	ILMN_251786	ILMN_251786	WFIKKN2	NM_181819.1	NM_181819.1		278507	32451493	NM_181819.1	Wfikkn2	NP_861540.1	ILMN_2874064	001820243	S	1516	GTAGACTGGACCTGTCCTTGCCCCAACGTGACAGTGGGTGAGACACCACT	11	-	94099062-94099111	11qD	Mus musculus WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 (Wfikkn2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]	Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC130508; Gasp1; RP23-244C22.2; WFIKKNRP; 2610304F08Rik; AY100450	MGC130508; Gasp1; RP23-244C22.2; WFIKKNRP; 2610304F08Rik; AY100450
Mus musculus	RefSeq	ILMN_201092	ILMN_201092	LOC384766	XM_357852.1	XM_357852.1			38089086	XM_357852.1	LOC384766		ILMN_1215711	000780440	S	51	CTTGGTCAGGGCATGCTTGAGGGACGCCAGTGGAAAGTACAATGCTGAAG										
Mus musculus	RefSeq	ILMN_247359	ILMN_247359	COMMD6	NM_001033132.1	NM_001033132.1		66200	84370277	NM_001033132.1	Commd6	NP_001028304.1	ILMN_2993720	002710653	S	478	CCAGGGGACCCGGCGCACATGCAGGCAAAACGCCAACGCTATAGAATAAA	14	-	100519843-100519892	14qE2.3	Mus musculus COMM domain containing 6 (Commd6), mRNA. XM_919080	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700063H17Rik; 1110059J08Rik	1700063H17Rik; 1110059J08Rik
Mus musculus	RefSeq	ILMN_217097	ILMN_217097	TMEM220	NM_177392.2	NM_177392.2		338369	141803080	NM_177392.2	Tmem220	NP_796366.1	ILMN_1228417	003460019	S	1060	GTACTGAACCCAGAAAAATTCCAGGGCAGGTGAACCAAATGAAAGTAGAA	11	+	66848205-66848254	11qB3	Mus musculus transmembrane protein 220 (Tmem220), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-67J22.6; MGC130169; MGC130170	RP23-67J22.6; MGC130169; MGC130170
Mus musculus	RefSeq	ILMN_213638	ILMN_325663	LOC100047870	XR_034030.1	XR_034030.1		100047870	149261459	XR_034030.1	LOC100047870		ILMN_2639207	006520730	S	749	CGTCGGCAGCAGAAACAGGCACAGTTGGAAGACTGGGGGGACTTAACTGC					PREDICTED: Mus musculus similar to calcium activated potassium channel beta 4 subunit (LOC100047870), misc RNA.					
Mus musculus	RefSeq	ILMN_206640	ILMN_319051	EG332993	XR_035198.1	XR_035198.1		332993	149253826	XR_035198.1	EG332993		ILMN_1226336	005810148	S	656	TGACTCACACTCCTATGGACTTGGAGAATTGTGGTCCCGAGGTTCGGCCG	5	-	30062116-30062165	5qB1	PREDICTED: Mus musculus predicted gene, EG332993 (EG332993), misc RNA.					
Mus musculus	Riken	ILMN_206019	ILMN_206019	C230074H09RIK	ri|C230074H09|PX00176J05|AK048840|2944					AK048840	C230074H09Rik		ILMN_1236562	004670722	S	2668	TACGGGTCTCCCCAGATCGGAGGCATCCAGCTCAAATCAAACACGGAATG										
Mus musculus	RefSeq	ILMN_222566	ILMN_318833	NDST2	NM_010811.2	NM_010811.2		17423	113195687	NM_010811.2	Ndst2	NP_034941.2	ILMN_2751587	002510041	S	3709	CAGTTTACCTGTCAATGCCTACCCCTGAGAGGCCCCTTCGCTATGGCCTC	14	-	21543100-21543149	14qA3	Mus musculus N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 (Ndst2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [evidence TAS]; The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-desulfoheparin = adenosine 3',5'-bisphosphate + heparin [goid 15016] [evidence TAS]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]	MGC124374; NDST-2; Mndns; MGC124373	MGC124374; NDST-2; Mndns; MGC124373
Mus musculus	MEEBO	ILMN_223812	ILMN_223812	BC019806	scl0218885.8_148				21703913	NM_145460	BC019806		ILMN_2769740	000360138	S	1605	ACATGGAGGGGACCTAGAAAACCATGGAGTTTCTCTGGTTGGCCTCTACA										
Mus musculus	RefSeq	ILMN_195865	ILMN_313844	LOC100045185	XM_001473814.1	XM_001473814.1		100045185	149265216	XM_001473814.1	LOC100045185	XP_001473864.1	ILMN_1243882	002710598	S	677	TACTGTTCCCCCCTGTCATCAGAGGACTCTCCCTGCCTCCACTCCATGGG					PREDICTED: Mus musculus hypothetical protein LOC100045185 (LOC100045185), mRNA.					
Mus musculus	RefSeq	ILMN_208743	ILMN_208743	PSCD1	NM_011180.2	NM_011180.2		19157	31543515	NM_011180.2	Pscd1	NP_035310.2	ILMN_2868827	003180196	S	2837	TGTGGGGAGTCAGGCAAGTGCAGAGCCCTCCCTTCACACCGGTTCTCACA	11	-	118025740-118025789	11qE2	Mus musculus pleckstrin homology, Sec7 and coiled-coil domains 1 (Pscd1), mRNA.				CYTIP; KIAA4240; CTH-1; CLM1; mKIAA4240	CYTIP; KIAA4240; CTH-1; CLM1; mKIAA4240
Mus musculus	RefSeq	ILMN_216847	ILMN_216847	TEF	NM_017376.2	NM_017376.2		21685	23821034	NM_017376.2	Tef	NP_059072.1	ILMN_2676052	005270082	S	4126	GCTGGTGGGCCGGAGTGATGTGTTATGGAGGGAAGTTGGGAATGTATCCT	15	+	81657234-81657283	15qE1	Mus musculus thyrotroph embryonic factor (Tef), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	2310028D20Rik	2310028D20Rik
Mus musculus	MEEBO	ILMN_221711	ILMN_221711	LOC381774	IGKV1-117_D00081_Ig_kappa_variable_1-117_10	XM_355772.1			38084231	XM_355772.1	LOC381774		ILMN_1250715	001580750	S	49	CTGTTAGGCTGTTGGTGCTGATGTTCTGGATTCCTGCTTCCAGCAGTGAT										
Mus musculus	RefSeq	ILMN_193439	ILMN_193439	UNC5A	NM_153131.3	NM_153131.3		107448	146149150	NM_153131.3	Unc5a	NP_694771.1	ILMN_1256350	007160440	S	3126	TTGGTTTAGCCACCTGTTCTCGCTCTGCCCTGGTCCCGGGGCCCAGAGTG				13qB1	Mus musculus unc-5 homolog A (C. elegans) (Unc5a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1976; Unc5h1	mKIAA1976; Unc5h1
Mus musculus	RefSeq	ILMN_193439	ILMN_193439	UNC5A	NM_153131.3	NM_153131.3		107448	146149150	NM_153131.3	Unc5a	NP_694771.1	ILMN_2511518	007570670	S	1063	GCGCCTTCTGTGAGGGGCAGAATGTCCAGAAAACAGCCTGCGCCACTCTG				13qB1	Mus musculus unc-5 homolog A (C. elegans) (Unc5a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1976; Unc5h1	mKIAA1976; Unc5h1
Mus musculus	RefSeq	ILMN_218996	ILMN_218996	1810009A15RIK	NM_025463.2	NM_025463.2		66276	142370464	NM_025463.2	1810009A15Rik	NP_079739.1	ILMN_1221262	001230736	S	97	TATTAAGCAGGGATCGGCGACGGAAACGCCAGGTGGTCGGGGCTGTGATA	19	+	8963648-8963697	19qA	Mus musculus RIKEN cDNA 1810009A15 gene (1810009A15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218896	ILMN_218896	SPINK2	NM_183284.2	NM_183284.2		69982	142366833	NM_183284.2	Spink2	NP_899107.1	ILMN_2701631	003610154	S	545	GTTCAACTTATGACCCAGGCGACTTTTGCATCGCTTTATTTCATTGGAAT	5	-	77634150-77634199	5qC3.3	Mus musculus serine peptidase inhibitor, Kazal type 2 (Spink2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	AV038945; 1700007F22Rik; HUSI-II; MGC107139	AV038945; 1700007F22Rik; HUSI-II; MGC107139
Mus musculus	RefSeq	ILMN_189590	ILMN_189590	UBXN10	NM_178671.3	NM_178671.3		212190	142385313	NM_178671.3	Ubxn10	NP_848786.1	ILMN_2462601	006330538	S	3196	GATCTTCCAGGAGACATGATTAAAGCTAGATTTGAGCCATCGTAATCACC	4	-	138274511-138274560	4qD3	Mus musculus UBX domain protein 10 (Ubxn10), mRNA.				5730509E04Rik; A830047D02	5730509E04Rik; A830047D02
Mus musculus	RefSeq	ILMN_222826	ILMN_213336	DLX5	NM_010056.2	NM_010056.2		13395	38524595	NM_010056.2	Dlx5	NP_034186.2	ILMN_2755371	001780400	S	1296	TGACCTCAACTTTTCAAAAGACTTTTTTCAATGTTATTTTAACCGTGTAA	6	-	6827865-6827914	6qA1	Mus musculus distal-less homeobox 5 (Dlx5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	AI385752	AI385752
Mus musculus	RefSeq	ILMN_213336	ILMN_213336	DLX5	NM_010056.2	NM_010056.2		13395	38524595	NM_010056.2	Dlx5	NP_034186.2	ILMN_1241949	002140538	S	549	GCGGAGCCAGAGGTGAGGATGGTGAATGGTAAACCAAAGAAAGTTCGTAA	6	-	6829649-6829698	6qA1	Mus musculus distal-less homeobox 5 (Dlx5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	AI385752	AI385752
Mus musculus	RefSeq	ILMN_222981	ILMN_222981	FAM110C	NM_027828.2	NM_027828.2		104943	31560094	NM_027828.2	Fam110c	NP_082104.2	ILMN_2757634	001170300	S	2187	AACTGGCTCACCACATGCCTGAGGTCTGGTTCCACTTCACATACAGTGGA	12	+	31764322-31764371	12qA2	Mus musculus family with sequence similarity 110, member C (Fam110c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			AU019489	AU019489
Mus musculus	RefSeq	ILMN_216460	ILMN_229632	ADAM12	NM_007400.2	NM_007400.2		11489	117606340	NM_007400.2	Adam12	NP_031426.2	ILMN_1243254	003400682	S	6823	GGAGACATGGGCACACATATGAATGTACCATTTCCATGCCTTTTGTGGAG	7	-	141075684-141075733	7qF3	Mus musculus a disintegrin and metallopeptidase domain 12 (meltrin alpha) (Adam12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	M[a]; KIAA4001; mKIAA4001; Mltna	M[a]; KIAA4001; mKIAA4001; Mltna
Mus musculus	RefSeq	ILMN_221366	ILMN_221366	RFX6	NM_177306.3	NM_177306.3		320995	142348304	NM_177306.3	Rfx6	NP_796280.1	ILMN_2734616	001450446	S	2935	GCTAGATCCAAGTGACTTGACCTTCTACCCCTGTGCACTAGTGTGGTGAT	10	+	51450082-51450131	10qB3	Mus musculus regulatory factor X, 6 (Rfx6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4930572O07Rik	4930572O07Rik
Mus musculus	RefSeq	ILMN_199358	ILMN_199358	LOC386416	XM_359218.1	XM_359218.1			38081566	XM_359218.1	LOC386416		ILMN_2534960	003170347	S	149	GTCTACAGACCTGTGCAACCTTAGCCCTGACCCAGTCACATGGAGCACAG										
Mus musculus	RefSeq	ILMN_196673	ILMN_258248	ZCCHC13	NM_029158.2	NM_029158.2		75064	142385400	NM_029158.2	Zcchc13	NP_083434.1	ILMN_1213002	002470689	S	232	CGCTGTGGTGAAACTGGTCACTACGCCAAGGACTGTGATCTTCTCCAGGA	X	+	100821147-100821196	XqD	Mus musculus zinc finger, CCHC domain containing 13 (Zcchc13), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930513O09Rik	4930513O09Rik
Mus musculus	RefSeq	ILMN_200512	ILMN_200512	LOC386522	XM_359370.1	XM_359370.1			38083017	XM_359370.1	LOC386522		ILMN_2539033	007100470	S	154	CAGTGGAAGATGAAGAAAGAGCAGAGGGTCGGTGGGCTACACAGCCTGCT										
Mus musculus	RefSeq	ILMN_216670	ILMN_216670	QSOX2	NM_153559.2	NM_153559.2		227638	118130105	NM_153559.2	Qsox2	NP_705787.1	ILMN_2673868	002850167	S	2387	TACATTTTGTATTTAAGTAAACTCTAATGTGCACATTGTAAGAATAAAGA	2	-	26064662-26064711	2qA3	Mus musculus quiescin Q6 sulfhydryl oxidase 2 (Qsox2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 4 R'C(R)SH + O2 = 2 R'C(R)S-S(R)CR' + 2 H2O [goid 16972] [evidence IEA]	SOXN; QSOX2; Qscn6l1; BC030934; MGC31729	SOXN; QSOX2; Qscn6l1; BC030934; MGC31729
Mus musculus	RefSeq	ILMN_213397	ILMN_213397	UBQLN3	NM_198623.2	NM_198623.2		244178	141801660	NM_198623.2	Ubqln3	NP_941025.1	ILMN_2636663	001580292	S	2285	GTGCCTGACACTCTTTTACCTGGGGCCCTTGAATGAGTTCTGTACCTATC	7	-	111289171-111289220	7qE3	Mus musculus ubiquilin 3 (Ubqln3), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		4933400K24Rik	4933400K24Rik
Mus musculus	RefSeq	ILMN_218056	ILMN_218056	IGF2BP3	NM_023670.2	NM_023670.2		140488	31542991	NM_023670.2	Igf2bp3	NP_076159.2	ILMN_1226175	006520356	S	3877	TCTGTTGGTTTCAATTCTGCCATATTTCATGTCTAGCCTTTAGAGTGGCC	6	-	49035396-49035445	6qB2.3	Mus musculus insulin-like growth factor 2 mRNA binding protein 3 (Igf2bp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AL022933; 2610101N11Rik; IMP-3; AA522010; Neilsen; AU045931; mimp3; Koc13; IMP3	AL022933; 2610101N11Rik; IMP-3; AA522010; Neilsen; AU045931; mimp3; Koc13; IMP3
Mus musculus	RefSeq	ILMN_196491	ILMN_218056	IGF2BP3	NM_023670.2	NM_023670.2		140488	31542991	NM_023670.2	Igf2bp3	NP_076159.2	ILMN_2590366	004560053	S	3141	CCCCTGGTCTTCACAAAGCAATCCTTTCCATGTCTGCTCAGAGTATGGTC	6	-	49036132-49036181	6qB2.3	Mus musculus insulin-like growth factor 2 mRNA binding protein 3 (Igf2bp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AL022933; 2610101N11Rik; IMP-3; AA522010; Neilsen; AU045931; mimp3; Koc13; IMP3	AL022933; 2610101N11Rik; IMP-3; AA522010; Neilsen; AU045931; mimp3; Koc13; IMP3
Mus musculus	RefSeq	ILMN_218056	ILMN_218056	IGF2BP3	NM_023670.2	NM_023670.2		140488	31542991	NM_023670.2	Igf2bp3	NP_076159.2	ILMN_1218913	002340131	S	2108	GGACCAGGCACTCGATCCTGTCTCTGTGAGAATGTATACTTTATGCTCTC	6	-	49037165-49037214	6qB2.3	Mus musculus insulin-like growth factor 2 mRNA binding protein 3 (Igf2bp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AL022933; 2610101N11Rik; IMP-3; AA522010; Neilsen; AU045931; mimp3; Koc13; IMP3	AL022933; 2610101N11Rik; IMP-3; AA522010; Neilsen; AU045931; mimp3; Koc13; IMP3
Mus musculus	RefSeq	ILMN_185470	ILMN_243299	ZFP511	XM_887149.3	XM_887149.3		69752	149258262	XM_887149.3	Zfp511	XP_892242.2	ILMN_1253718	005220301	S	852	GGCCTTTTTCTCACTTCTGGATCAATGCCCTGTGCTGGACCCTTGTCACC	7	+	147226272-147226321	7qF4	PREDICTED: Mus musculus zinc finger protein 511 (Zfp511), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_195099	ILMN_243299	ZFP511	XM_887149.3	XM_887149.3		69752	149258262	XM_887149.3	Zfp511	XP_892242.2	ILMN_2512580	006380307	S	385	ACCGTGCCTTCCCCTCTGGGCATTTGCTGGATGTCCACATCCTGGAATGG	7	+	147223229-147223278	7qF4	PREDICTED: Mus musculus zinc finger protein 511 (Zfp511), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_201550	ILMN_315143	LOC100047759	XM_001479214.1	XM_001479214.1		100047759	149259319	XM_001479214.1	LOC100047759	XP_001479264.1	ILMN_1238874	006020343	S	72	CTCACTTCATCCGGCGACTAGCACCGTGCCGGCAGTCTACAGCATGGCTT					PREDICTED: Mus musculus similar to acidic ribosomal phosphoprotein P1, transcript variant 1 (LOC100047759), mRNA.					
Mus musculus	RefSeq	ILMN_198813	ILMN_258520	MRGPRX2	NM_001034868.2	NM_001034868.2		243978	141802509	NM_001034868.2	Mrgprx2	NP_001030040.1	ILMN_1232634	007610463	S	1292	GCAAGCTCTGTGGGGTCCAGGAAAGCTGTTGACCACAATTGATAAATCCC	7	-	55737136-55737185	7qB4	Mus musculus MAS-related GPR, member X2 (Mrgprx2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Mrgprb10; G370024M05Rik; MrgB10	Mrgprb10; G370024M05Rik; MrgB10
Mus musculus	MEEBO	ILMN_193854	ILMN_193854	4933427I18RIK	scl12324.4.1_115						4933427I18Rik		ILMN_1232934	000870215	S	20	TAGTCTGGGCTATTAAGCCTCAGTTATCCCTTCAACGTGCACACACGGCA										
Mus musculus	Riken	ILMN_205870	ILMN_205870	C130035K09RIK	ri|C130035K09|PX00169K16|AK048115|2433					AK048115	C130035K09Rik		ILMN_1221162	002490670	S	2264	TTCATTGTTCTTCCTTACAGGCTCAGTTTGTGGAACACCACCCCCACCCC										
Mus musculus	RefSeq	ILMN_199161	ILMN_199161	LOC270893	XM_194796.3	XM_194796.3			38091517	XM_194796.3	LOC270893		ILMN_1248241	005270754	S	2530	GAACGCAAGGTGTACCCAGGACCAACACATTTTTCCCCCTCTGCCTGAGC										
Mus musculus	RefSeq	ILMN_214016	ILMN_224711	4833413O15RIK	NM_001080710.1	NM_001080710.1		242286	123959729	NM_001080710.1	4833413O15Rik	NP_001074179.1	ILMN_1254665	000290446	S	1713	CTCCTACTAGGTTTAGATGACTATATGAAGACTGTTAGTGCAACTAAAAC	4	-	3983238-3983287	4qA1	Mus musculus RIKEN cDNA 4833413O15 gene (4833413O15Rik), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Gm423	Gm423
Mus musculus	RefSeq	ILMN_217218	ILMN_217218	ATP6V1B2	NM_007509.2	NM_007509.2		11966	19705577	NM_007509.2	Atp6v1b2	NP_031535.2	ILMN_2680440	005390041	S	2422	CTGGGTGATCTTGTGGCACATGTAGCAATGTTTCTTTCATTCCTGTCCCT	8	+	71637346-71637395	8qB3.3	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit B2 (Atp6v1b2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from a source such as ATP hydrolysis, light, or electron transport [goid 15988] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]	HO57; Atp6b2; AI194269; R74844; AI790362	HO57; Atp6b2; AI194269; R74844; AI790362
Mus musculus	RefSeq	ILMN_215837	ILMN_215837	CST3	NM_009976.3	NM_009976.3		13010	141803473	NM_009976.3	Cst3	NP_034106.2	ILMN_1257575	006130669	S	343	GGATGTGGAGATGGGCCGAACTACATGTACCAAGTCCCAGACAAATTTGA	2	-	148698590-148698639	2qG3	Mus musculus cystatin C (Cst3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	CysC	CysC
Mus musculus	MEEBO	ILMN_184527	ILMN_184527	4932432K03RIK	scl46379.7_18				31981703	NM_144535	4932432K03Rik		ILMN_2756713	001570747	S	2750	CAAAAGCCTTTCTGTGGGTATCATTTAGACTTATTTAATATAGCAATTTT						A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_202118	ILMN_202118	IGFBPL	ri|2810453O06|ZX00067E09|AK013339|630					AK013339	IGFBPL		ILMN_1238723	006960176	S	459	AAGAAGAGAAAGGTGTAAGTCTGGGAACCCGAGGGAGGGCAGAGAGCGGG										
Mus musculus	RefSeq	ILMN_218950	ILMN_218950	IL18RAP	NM_010553.2	NM_010553.2		16174	142348110	NM_010553.2	Il18rap	NP_034683.1	ILMN_1221620	000430446	S	2128	CAGGTTTATGTTCAACGGGCTCAGAATTTTCCTGAAGGGCTTTTCCCCTG	1	+	40605790-40605839	1qB	Mus musculus interleukin 18 receptor accessory protein (Il18rap), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]		
Mus musculus	Riken	ILMN_204287	ILMN_204287	CCT3	ri|9630046K20|PX00116C24|AK036222|1751					AK036222	Cct3		ILMN_1251158	007330301	S	1366	CAGTGCTCTTCCAAAGGACCCATATTCAGTTCCCAACACCCACTGTACCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217070	ILMN_217070	BAG3	NM_013863.4	NM_013863.4		29810	115270959	NM_013863.4	Bag3	NP_038891.4	ILMN_1226195	006660653	S	2137	GCCGTGGCTGTGGGCTATCTTCCTGTTAGCCTTGGACTGAAGGGGTTTTA	7	+	135690226-135690275	7qF3	Mus musculus BCL2-associated athanogene 3 (Bag3), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bis; AA407278	Bis; AA407278
Mus musculus	Riken	ILMN_201923	ILMN_201923	4933439J11RIK	ri|4933439J11|PX00021N24|AK017122|1513					AK017122	4933439J11Rik		ILMN_2545658	004810609	S	1360	TAGGACCCAGGACAGGCCGGTTAGGAGAGGGCAAGAGATCACGTTCAGGT										
Mus musculus	RefSeq	ILMN_234453	ILMN_234453	RBM24	NM_001081425.1	NM_001081425.1		666794	124487276	NM_001081425.1	Rbm24	NP_001074894.1	ILMN_2802711	003930164	S	486	GTTACCCGGACGATCCGGAAGGTCTGGACAGTGACCGGACGCGGGGACTG	13	+	46514154-46514203	13qA5	Mus musculus RNA binding motif protein 24 (Rbm24), mRNA.					
Mus musculus	RefSeq	ILMN_215517	ILMN_258068	NT5DC2	NM_027289.1	NM_027289.1		70021	110625754	NM_027289.1	Nt5dc2	NP_081565.1	ILMN_2660519	003460446	S	789	TTTCTTCGTCTGACGGAATGGCGAGGGCCGCGTGTGCTCTACTTCGGTGA	14	+	31951325-31951374	14qB	Mus musculus 5'-nucleotidase domain containing 2 (Nt5dc2), mRNA.			Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]	2510015F01Rik	2510015F01Rik
Mus musculus	RefSeq	ILMN_209439	ILMN_209439	MTA2	NM_011842.3	NM_011842.3		23942	51491879	NM_011842.3	Mta2	NP_035972.3	ILMN_2595774	001030053	S	2878	CTGTCCGGTGTCCGGACTTTCCTAATTGGAATTTGAGAGCCCTAAGATGG	19	+	9026581-9026630	19qA	Mus musculus metastasis-associated gene family, member 2 (Mta2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IPI]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence IPI]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IPI]	Any process by which DNA and associated proteins are formed into a compact, orderly structure [goid 6323] [evidence TAS]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Mta1l1; Mata1l1; mmta2; AW550797	Mta1l1; Mata1l1; mmta2; AW550797
Mus musculus	RefSeq	ILMN_216794	ILMN_216794	OLFR1441	NM_146683.1	NM_146683.1		258678	33239077	NM_146683.1	Olfr1441	NP_666894.1	ILMN_1222683	003370523	S	793	GCTGGATACTCACAGGACAAAAATAAGGTGGTGTCCATGTTCTATGGTGC	19	+	12497593-12497642	19qA	Mus musculus olfactory receptor 1441 (Olfr1441), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR215-2	MOR215-2
Mus musculus	RefSeq	ILMN_185375	ILMN_255987	PLEK	NM_019549.1	NM_019549.1		56193	11464970	NM_019549.1	Plek	NP_062422.1	ILMN_1249498	001820075	S	3750	GCAACACTGTAGTAGGGTTTTTGGGAAAGTTCAATCTATATTCCCAAGCC	11	-	16871510-16871559	11qA2	Mus musculus pleckstrin (Plek), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		2010300B13Rik	2010300B13Rik
Mus musculus	RefSeq	ILMN_186648	ILMN_323202	LOC100041613	XM_001476689.1	XM_001476689.1		100041613	149270401	XM_001476689.1	LOC100041613	XP_001476739.1	ILMN_1222185	000380041	S	1483	CAGACTTAGTTTGGGTCATTTGTCCTAGGATCTTTGGGATTTATTTCTGT	19	-	21345656-21345705	19qB	PREDICTED: Mus musculus hypothetical protein LOC100041613 (LOC100041613), mRNA.					
Mus musculus	RefSeq	ILMN_190478	ILMN_190478	ZIC2	NM_009574.3	NM_009574.3		22772	112734852	NM_009574.3	Zic2	NP_033600.3	ILMN_2470518	007610754	S	1470	TCTGCAAGATGTGTGACAAGTCCTACACGCATCCCAGCTCGTTGCGGAAG	14	+	122877867-122877916	14qE5	Mus musculus zinc finger protein of the cerebellum 2 (Zic2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Ku; HPE5	Ku; HPE5
Mus musculus	Riken	ILMN_206816	ILMN_206816	HMG20A	ri|D930023C05|PX00202B01|AK086346|1209					AK086346	Hmg20a		ILMN_2582897	006900369	S	1156	TTGCACTGAGCCACATCCCTAGGCTCCTTAGTAGCTTCATGTTCCTAGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215905	ILMN_215905	LRPPRC	NM_028233.2	NM_028233.2		72416	134031975	NM_028233.2	Lrpprc	NP_082509.2	ILMN_2683718	006760497	S	1705	AACTATGTGTTTCCGTGCTTTGATAGTGCACAGTCAGTTCGAGCTGCTTT	17	-	85166336-85166385	17qE4	Mus musculus leucine-rich PPR-motif containing (Lrpprc), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]	GP130; 3110001K13Rik; C76645; Lrp130; LSFC	GP130; 3110001K13Rik; C76645; Lrp130; LSFC
Mus musculus	RefSeq	ILMN_211514	ILMN_211514	NFE2L2	NM_010902.3	NM_010902.3		18024	76573877	NM_010902.3	Nfe2l2	NP_035032.1	ILMN_1224128	001110201	S	567	GATGCCTTGTACTTTGAAGACTGTATGCAGCTTTTGGCAGAGACATTCCC	2	-	75516563-75516612	2qC3	Mus musculus nuclear factor, erythroid derived 2, like 2 (Nfe2l2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nrf2; AI194320	Nrf2; AI194320
Mus musculus	RefSeq	ILMN_211514	ILMN_211514	NFE2L2	NM_010902.3	NM_010902.3		18024	76573877	NM_010902.3	Nfe2l2	NP_035032.1	ILMN_1214369	001710019	S	2099	AATGCAGAAACACTTTATAAGTAACTATGCAGAATTATAGCCAAAGCTAG	2	-	75513896-75513945	2qC3	Mus musculus nuclear factor, erythroid derived 2, like 2 (Nfe2l2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nrf2; AI194320	Nrf2; AI194320
Mus musculus	Riken	ILMN_206862	ILMN_206862	D630047N04RIK	ri|D630047N04|PX00198K07|AK085620|3080					AK085620	D630047N04Rik		ILMN_2583239	006840673	S	2529	CAGTGATTGGGCTAGACATAAAGCCACATTCCTGCTTCAGCTTCTGGGAA										
Mus musculus	RefSeq	ILMN_217673	ILMN_217673	OLFR916	NM_146784.1	NM_146784.1		258780	22129284	NM_146784.1	Olfr916	NP_666995.1	ILMN_2686214	004200025	S	542	TTCCACCTTTGCTCCAACTTTCCTGTACAACCACATATATCAACAAGCTT	9	-	38465384-38465433	9qA5.1	Mus musculus olfactory receptor 916 (Olfr916), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR168-1	MOR168-1
Mus musculus	RefSeq	ILMN_256195	ILMN_256195	OLFR527	NM_001011776.1	NM_001011776.1		257939	58801327	NM_001011776.1	Olfr527	NP_001011776.1	ILMN_2877595	004060594	S	462	CGTGCACACAGGCCTGATGTTGCGTCTACCATTCTGCAGCTCCAATGTGA	7	+	147522224-147522273	7qF4	Mus musculus olfactory receptor 527 (Olfr527), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR251-5	MOR251-5
Mus musculus	RefSeq	ILMN_214244	ILMN_214244	SIM2	NM_011377.2	NM_011377.2		20465	119226236	NM_011377.2	Sim2	NP_035507.2	ILMN_2645872	001850288	S	3329	TATATATAGCCAGGCATGTTAGAGAATGGCCCTGTCAAGCACCTCCCTGG	16	+	94348297-94348346	16qC4	Mus musculus single-minded homolog 2 (Drosophila) (Sim2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199741	ILMN_199741	LOC382955	XM_356767.1	XM_356767.1			38076727	XM_356767.1	LOC382955		ILMN_1244022	004760315	S	12	GGTGCTCCAGAGGGGCCAATGGGTAAGAGGAATGCCGGTGGAACAGAATC										
Mus musculus	RefSeq	ILMN_218163	ILMN_218163	PSRC1	NM_019976.2	NM_019976.2		56742	142368259	NM_019976.2	Psrc1	NP_064360.1	ILMN_2692441	007550113	S	1325	GAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAACTCACAAACAA	3	+	108190740-108190789	3qF3	Mus musculus proline/serine-rich coiled-coil 1 (Psrc1), mRNA.	A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of microtubule polymerization [goid 31116] [evidence IDA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	AL033312; Dda3; MGC7063; RP23-27B23.8; 5430413I02Rik	AL033312; Dda3; MGC7063; RP23-27B23.8; 5430413I02Rik
Mus musculus	Riken	ILMN_207187	ILMN_207187	6820437F20RIK	ri|6820437F20|PX00650I09|AK078535|2793					AK078535	6820437F20Rik		ILMN_1258070	002900242	S	2555	GGTCCTGGCTCCTGTGCTTCTGTGAGAAAGGCCCCATTGAGTGTTGAGCT										
Mus musculus	RefSeq	ILMN_199843	ILMN_250207	LOC631256	XM_001001366.1	XM_001001366.1		631256	94399846	XM_001001366.1	LOC631256	XP_001001366.1	ILMN_1250411	001450047	S	1930	GCTAGGCGAGGTGAAGAGTGCTGTTGTTCGGCTCCATGATGACCTGAGCC					PREDICTED: Mus musculus similar to epsin 2 isoform a (LOC631256), mRNA.					
Mus musculus	RefSeq	ILMN_196425	ILMN_196425	A530058N18RIK	XM_287155.1	XM_287155.1			28487465	XM_287155.1	A530058N18Rik		ILMN_1221888	002480601	S	769	CCTCCTGTTTTCACCTAGAAGCAGCAGAGCTGTGTGGGTCAGTCCCCTGC										
Mus musculus	RefSeq	ILMN_212781	ILMN_309878	LOC100042777	XM_001478939.1	XM_001478939.1		100042777	149258585	XM_001478939.1	LOC100042777	XP_001478989.1	ILMN_1217879	007320433	S	676	GTGGGGACAAGGTTAGTCATATAGCCTCTGGGAAAGTCTCAGTGAAAAAT	8	-	35174071-35174120	8qA4	PREDICTED: Mus musculus similar to human protein homologous to DROER protein (LOC100042777), mRNA.					
Mus musculus	Riken	ILMN_206786	ILMN_206786	HPS3	ri|A430107C19|PX00316B05|AK079896|2600					AK079896	Hps3		ILMN_1217589	001780022	S	2057	GAACTGCGATTGTTTGGGTACTTGTTGTTGGTAGCCTCCGGGAGGGGGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]			
Mus musculus	RefSeq	ILMN_213053	ILMN_213053	ODF3	NM_027019.1	NM_027019.1		69287	16756269	NM_027019.1	Odf3	NP_081295.1	ILMN_1230987	004670338	S	965	CTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGA	7	+	140702196-140702245	7qF5	Mus musculus outer dense fiber of sperm tails 3 (Odf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Structure or material found in the flagella of mammalian sperm that surrounds each of the nine microtubule doublets, giving a 9 + 9 + 2 arrangement rather than the 9 + 2 pattern usually seen. These dense fibers are stiff and noncontractile [goid 1520] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC123685; 1700011O04Rik; shippo 1; MGC123743; MGC123742; SHIPPO1	MGC123685; 1700011O04Rik; shippo 1; MGC123743; MGC123742; SHIPPO1
Mus musculus	RefSeq	ILMN_184789	ILMN_238301	ILKAP	NM_023343.2	NM_023343.2		67444	118129850	NM_023343.2	Ilkap	NP_075832.1	ILMN_2727893	000730136	S	1044	GCTGGCTTGCGACGGGCTTTTCAAGGTCTTTACCCCAGAAGAAGCTGTGA	1	-	93272917-93272966	1qD	Mus musculus integrin-linked kinase-associated serine/threonine phosphatase 2C (Ilkap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]	0710007A14Rik; PP2C-DELTA; 1600009O09Rik	0710007A14Rik; PP2C-DELTA; 1600009O09Rik
Mus musculus	RefSeq	ILMN_210686	ILMN_210686	MBD1	NM_013594.1	NM_013594.1		17190	7305258	NM_013594.1	Mbd1	NP_038622.1	ILMN_2893081	001110338	S	2438	GTGCTGAAGACCTGCTAGTTTCCTGGATTGTATTGCCAGTTTTGCCTGGG	18	+	74441969-74442018	18qE2	Mus musculus methyl-CpG binding domain protein 1 (Mbd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	PCM1; Cxxc3	PCM1; Cxxc3
Mus musculus	RefSeq	ILMN_210686	ILMN_210686	MBD1	NM_013594.1	NM_013594.1		17190	7305258	NM_013594.1	Mbd1	NP_038622.1	ILMN_2684039	004670008	S	1302	ACAAGCCCAAATTCGGGGGTGGCAACCAGAAGCGCCAGAAGTGTCGTTGG	18	+	74435664-74435713	18qE2	Mus musculus methyl-CpG binding domain protein 1 (Mbd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	PCM1; Cxxc3	PCM1; Cxxc3
Mus musculus	RefSeq	ILMN_210686	ILMN_210686	MBD1	NM_013594.1	NM_013594.1		17190	7305258	NM_013594.1	Mbd1	NP_038622.1	ILMN_2749511	005810474	S	835	GGCCTCAGGGCTTTACTGCAAGTGTGAGCGGAGACGATGCCTGCGGATTA	18	+	74434170-74434215:74434299-74434302	18qE2	Mus musculus methyl-CpG binding domain protein 1 (Mbd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	PCM1; Cxxc3	PCM1; Cxxc3
Mus musculus	RefSeq	ILMN_210686	ILMN_210686	MBD1	NM_013594.1	NM_013594.1		17190	7305258	NM_013594.1	Mbd1	NP_038622.1	ILMN_2749518	005860528	S	822	GCCCAGTGATGTGGCCTCAGGGCTTTACTGCAAGTGTGAGCGGAGACGAT	18	+	74434157-74434206	18qE2	Mus musculus methyl-CpG binding domain protein 1 (Mbd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	PCM1; Cxxc3	PCM1; Cxxc3
Mus musculus	RefSeq	ILMN_210686	ILMN_210686	MBD1	NM_013594.1	NM_013594.1		17190	7305258	NM_013594.1	Mbd1	NP_038622.1	ILMN_1224291	005720474	S	2265	ACACATGAATTGCACTTAGTATCTGTCAGTGACTGGCCTTATTACTGCCC	18	+	74441796-74441845	18qE2	Mus musculus methyl-CpG binding domain protein 1 (Mbd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	PCM1; Cxxc3	PCM1; Cxxc3
Mus musculus	RefSeq	ILMN_199505	ILMN_246429	LOC666547	XM_984535.1	XM_984535.1		666547	94364592	XM_984535.1	LOC666547	XP_989629.1	ILMN_1239623	005890747	S	2445	CGCCTACAAGTCCTGCAAGCCCCTGAGCATCTGGGTGAGCAACCTCATCC	1	+	183641638-183641687		PREDICTED: Mus musculus similar to dynein, axonemal, heavy polypeptide 1 (LOC666547), mRNA.					
Mus musculus	Riken	ILMN_204387	ILMN_204387	A130003K09RIK	ri|A130003K09|PX00120H06|AK037287|1904					AK037287	A130003K09Rik		ILMN_2564584	003710326	S	1695	GTTGTGGTTGCTGTGGGTTCTGGCATCCGAACTCTGGTCCTTCAGGAGGG										
Mus musculus	RefSeq	ILMN_220786	ILMN_316185	EG434758	XM_001474585.1	XM_001474585.1		434758	149271515	XM_001474585.1	EG434758	XP_001474635.1	ILMN_1216028	003390762	S	325	GTACCACGACGTCGATTGCACCATAGATTCACCCAGTGGCAGCTGGACGA	X	-	35075545-35075594	XqA3.3	PREDICTED: Mus musculus predicted gene, EG434758 (EG434758), mRNA.					
Mus musculus	RefSeq	ILMN_224177	ILMN_242028	RASSF3	NM_138956.3	NM_138956.3		192678	118129986	NM_138956.3	Rassf3	NP_620406.1	ILMN_2776056	006980750	S	3166	CGTTGTTCAGATTCTCCGGTAAAGCGAAAGCCAGCTTTGCTATAATGCTG	10	-	120847615-120847664	10qD2	Mus musculus Ras association (RalGDS/AF-6) domain family member 3 (Rassf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW322379; AW212023	AW322379; AW212023
Mus musculus	RefSeq	ILMN_187116	ILMN_187116	ZFP598	NM_183149.1	NM_183149.1		213753	34147168	NM_183149.1	Zfp598	NP_898972.1	ILMN_1257200	007000386	S	2630	AGCAGGTACTGGCACACGGTGACGTCAGCAGCCACCAGGCACTGCACGCT	17	+	24818304-24818353	17qA3.3	Mus musculus zinc finger protein 598 (Zfp598), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC023040	BC023040
Mus musculus	RefSeq	ILMN_210010	ILMN_210010	OLFR1262	NM_146974.1	NM_146974.1		258976	22128982	NM_146974.1	Olfr1262	NP_667185.1	ILMN_2601330	006450671	S	774	CTCCTTCCACATTGACAAAATTGTGAGTGTGTTTTACACCCTAGTGACTC	2	+	89843338-89843387	2qE1	Mus musculus olfactory receptor 1262 (Olfr1262), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	or-leaf2; MOR234-1	or-leaf2; MOR234-1
Mus musculus	RefSeq	ILMN_197789	ILMN_197789	LOC277795	XM_205514.2	XM_205514.2			38078127	XM_205514.2	LOC277795		ILMN_1243442	006420348	S	840	AGTGGAAGTCCAGTGCCAAGTCCACGATGGGTGTGGAAAAGGAAGGGCCC										
Mus musculus	RefSeq	ILMN_215506	ILMN_215506	ALG5	NM_025442.3	NM_025442.3		66248	146134997	NM_025442.3	Alg5	NP_079718.1	ILMN_2660414	007380634	S	743	ACACACAGTGCGGGTTCAAATTACTGACCCGAGAAGCAGCAGCCCGGACC				3qC	Mus musculus asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase) (Alg5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-glucose + dolichyl phosphate = UDP + dolichyl beta-D-glucosyl phosphate [goid 4581] [evidence IEA]	AW545564; AV170001; AV009521; 1500026A19Rik; 2600005J22Rik	AW545564; AV170001; AV009521; 1500026A19Rik; 2600005J22Rik
Mus musculus	RefSeq	ILMN_215506	ILMN_215506	ALG5	NM_025442.3	NM_025442.3		66248	146134997	NM_025442.3	Alg5	NP_079718.1	ILMN_1215967	001400450	S	519	GATCCTCATGGCAGATGCTGACGGAGCCACAAAGTTTCCAGATGTTGAGA				3qC	Mus musculus asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase) (Alg5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-glucose + dolichyl phosphate = UDP + dolichyl beta-D-glucosyl phosphate [goid 4581] [evidence IEA]	AW545564; AV170001; AV009521; 1500026A19Rik; 2600005J22Rik	AW545564; AV170001; AV009521; 1500026A19Rik; 2600005J22Rik
Mus musculus	RefSeq	ILMN_215506	ILMN_215506	ALG5	NM_025442.3	NM_025442.3		66248	146134997	NM_025442.3	Alg5	NP_079718.1	ILMN_1222503	006900040	S	1020	GTTGCTGGCAGGGCTGGACTGCATTTTTATCCCACATGCAATTTCACTTG				3qC	Mus musculus asparagine-linked glycosylation 5 homolog (yeast, dolichyl-phosphate beta-glucosyltransferase) (Alg5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-glucose + dolichyl phosphate = UDP + dolichyl beta-D-glucosyl phosphate [goid 4581] [evidence IEA]	AW545564; AV170001; AV009521; 1500026A19Rik; 2600005J22Rik	AW545564; AV170001; AV009521; 1500026A19Rik; 2600005J22Rik
Mus musculus	RefSeq	ILMN_236229	ILMN_236229	TTC37	NM_001081352.1	NM_001081352.1		218343	124486882	NM_001081352.1	Ttc37	NP_001074821.1	ILMN_3135991	000520133	A	4865	GGGAGCAAGAGAGACACGGCGGCTTTTGGAGAGAATCGTGTACCAGACTG	13	+	76320385-76320393:76322575-76322615	13qC1	Mus musculus tetratricopeptide repeat domain 37 (Ttc37), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	mKIAA0372; KIAA0372	mKIAA0372; KIAA0372
Mus musculus	RefSeq	ILMN_212090	ILMN_226746	TSR1	NM_177325.3	NM_177325.3		104662	126506293	NM_177325.3	Tsr1	NP_796299.2	ILMN_2644061	002230390	S	3101	CTGGCCTATTATAAGAGACCTTGTGGATGATGTCTTCACTGTCACCGAAG	11	+	74722558-74722607	11qB5	Mus musculus TSR1, 20S rRNA accumulation, homolog (yeast) (Tsr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		mKIAA1401; AW550801; AU040765; RP23-174M12.4	mKIAA1401; AW550801; AU040765; RP23-174M12.4
Mus musculus	RefSeq	ILMN_223975	ILMN_226746	TSR1	NM_177325.3	NM_177325.3		104662	126506293	NM_177325.3	Tsr1	NP_796299.2	ILMN_2772492	000160669	S	2904	GGAGCAAGGGTTAATGAAACAAGAAACGGAGCCGGAGTCTAGTAGGTTAC	11	+	74722361-74722410	11qB5	Mus musculus TSR1, 20S rRNA accumulation, homolog (yeast) (Tsr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		mKIAA1401; AW550801; AU040765; RP23-174M12.4	mKIAA1401; AW550801; AU040765; RP23-174M12.4
Mus musculus	RefSeq	ILMN_185486	ILMN_232487	2610039C10RIK	NM_025642.1	NM_025642.1		66578	70909368	NM_025642.1	2610039C10Rik	NP_079918.1	ILMN_2427420	001260609	S	1019	CCTTGAAAATTAGTGCTTAAGCCTCTCTGGAAAAATTGTCAGTTGACTTG	16	-	90719788-90719837	16qC3.3	Mus musculus RIKEN cDNA 2610039C10 gene (2610039C10Rik), mRNA.				2810018N07Rik; MGC100039	2810018N07Rik; MGC100039
Mus musculus	RefSeq	ILMN_232487	ILMN_232487	2610039C10RIK	NM_025642.1	NM_025642.1		66578	70909368	NM_025642.1	2610039C10Rik	NP_079918.1	ILMN_2913326	002680202	S	1109	GAGACCCCCATTTTGCTGTGTGCTACTTCATGCTTAAAGAGTCTGGAGGC	16	-	90719698-90719747	16qC3.3	Mus musculus RIKEN cDNA 2610039C10 gene (2610039C10Rik), mRNA.				2810018N07Rik; MGC100039	2810018N07Rik; MGC100039
Mus musculus	RefSeq	ILMN_216043	ILMN_216043	ANXA11	NM_013469.1	NM_013469.1		11744	7304884	NM_013469.1	Anxa11	NP_038497.1	ILMN_2666669	001580689	S	1677	CTGGCATTGGCCAGGAAACGTCCCAAAGAGCACACTTCGGTTTCCCTATC	14	+	26705587-26705636	14qA3	Mus musculus annexin A11 (Anxa11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine [goid 8429] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IDA]	Anx11; A830099O17Rik	Anx11; A830099O17Rik
Mus musculus	RefSeq	ILMN_216043	ILMN_216043	ANXA11	NM_013469.1	NM_013469.1		11744	7304884	NM_013469.1	Anxa11	NP_038497.1	ILMN_3107156	002070615	A	2106	GGGAGGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGG	14	+	26706016-26706065	14qA3	Mus musculus annexin A11 (Anxa11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine [goid 8429] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IDA]	Anx11; A830099O17Rik	Anx11; A830099O17Rik
Mus musculus	Riken	ILMN_206141	ILMN_206141	A530055J02RIK	ri|A530055J02|PX00141K04|AK080063|1919					AK080063	A530055J02Rik		ILMN_1245845	005960102	S	1640	TACAATGGCCTAGGGGAAAGGTCGACTAGAGTAGGAACTATGGCAAGGGC										
Mus musculus	RefSeq	ILMN_191857	ILMN_231064	LOC636875	XM_992953.1	XM_992953.1		636875	94378745	XM_992953.1	LOC636875	XP_998047.1	ILMN_2482821	005050703	S	128	GCAGGGCCAGTCAGAGCATTGGCACAAGCATACACTGGTATCAGCAAAGA					PREDICTED: Mus musculus similar to Ig kappa chain V-V region L7 precursor (LOC636875), mRNA.					
Mus musculus	RefSeq	ILMN_220998	ILMN_220998	B3GAT3	NM_024256.2	NM_024256.2		72727	31980750	NM_024256.2	B3gat3	NP_077218.1	ILMN_2845045	002370438	S	1112	AACCTAAGATGAAGCAGGAGGAGCAGCTACAACGGCAGGGCCAGGGCTCA	19	+	9001254-9001303	19qA	Mus musculus beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) (B3gat3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 15018] [evidence IEA]	2810405M13Rik	2810405M13Rik
Mus musculus	RefSeq	ILMN_220998	ILMN_220998	B3GAT3	NM_024256.2	NM_024256.2		72727	31980750	NM_024256.2	B3gat3	NP_077218.1	ILMN_2729706	001850372	S	1032	CCACCTTGTAGATCCCAAGGACCTGGAGCCACGGGCTGCCAATTGTACTC	19	+	9000811-9000860	19qA	Mus musculus beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) (B3gat3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 15018] [evidence IEA]	2810405M13Rik	2810405M13Rik
Mus musculus	RefSeq	ILMN_222379	ILMN_222379	BCL6	NM_009744.3	NM_009744.3		12053	142360700	NM_009744.3	Bcl6	NP_033874.1	ILMN_1230353	000870707	S	3158	CCTCCCACATTCTGCGTCATGCTTGTCGTTATAATTACTCCGGAGACAGG	16	-	23965215-23965264	16qB1	Mus musculus B-cell leukemia/lymphoma 6 (Bcl6), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	An immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is typically orchestrated by the production of particular cytokines by T-helper 2 cells, most notably IL-4, IL-5, IL-10, and IL-13, resulting in enhanced production of certain antibody isotypes and other effects [goid 42092] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell differentiation [goid 45629] [evidence IGI]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IGI]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process by which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation [goid 2467] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a T-helper 2 type immune response [goid 2829] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of isotype switching to IgE isotypes [goid 48294] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of isotype switching to IgE isotypes [goid 48294] [evidence IGI]; Any process that modulates the frequency, rate, or extent of memory T cell differentiation [goid 43380] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell cytokine production [goid 32764] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the movement of a cell [goid 51272] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Rho protein signal transduction [goid 35024] [evidence IMP]; Any process that modulates the activity of a GTPase of the Rho family [goid 32319] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process by which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation [goid 2467] [evidence IMP]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IMP]; The process by which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation [goid 2467] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISO]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence ISO]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA that is assembled into chromatin [goid 31490] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Bcl5	Bcl5
Mus musculus	MEEBO	ILMN_210427	ILMN_210427	CDH2	scl0002172.1_30	NM_007664.1			6680901	NM_007664.1	Cdh2		ILMN_2605503	006980523	S	440	CCTGAAGATGTTTACAGCGCAGTCTTACCGAAGGATGTGCACGAAGGACA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_202779	ILMN_202779	4930504G24RIK	ri|4930504G24|PX00033A08|AK029719|3407					AK029719	4930504G24Rik		ILMN_1245229	000360128	S	2902	CAGGTCTGCAGGAAGGCAGAGAAGGCGACTGGGTGGGTAACTGTCACATT										
Mus musculus	RefSeq	ILMN_212454	ILMN_247694	FAM120A	NM_001033268.2	NM_001033268.2		218236	126090856	NM_001033268.2	Fam120a	NP_001028440.2	ILMN_1243457	003130142	S	4066	CCATGCATCTGTGATCAGTGAGCTACGTGGTTTTGAATCGGACGTAGACC	13	-	48975388-48975437	13qA5	Mus musculus family with sequence similarity 120, member A (Fam120a), mRNA.				KIAA0183	KIAA0183
Mus musculus	RefSeq	ILMN_216141	ILMN_228976	MYH3	XM_908146.3	XM_908146.3		17883	149262169	XM_908146.3	Myh3	XP_913239.1	ILMN_1227179	006420471	S	5916	GTGGCTCCTGACAATTCTACTTAATTTCCACGTATCACTTTTCCACATGC				11qB3	PREDICTED: Mus musculus myosin, heavy polypeptide 3, skeletal muscle, embryonic (Myh3), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	MEEBO	ILMN_220193	ILMN_220193	SLC30A2	scl24849.9.1_206	XM_131731.3			38078882	XM_131731.3	Slc30a2		ILMN_2718910	005130598	S	4072	TTTGATCAGTGTCCTGGAAAAGGCTCTTGTGAAGGGCCAGACGGGCTTCC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_208680	ILMN_208680	PHF1	NM_009343.2	NM_009343.2		21652	111185927	NM_009343.2	Phf1	NP_033369.2	ILMN_2729890	003710097	S	321	GCTCACACTCAGTCTTCCCGCACCGGAGACTCATCCAGGTCTCTTGAGTC	17	+	27070392-27070441	17qA3.3	Mus musculus PHD finger protein 1 (Phf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	PHF2; D17Ertd455e; Tctex3; Tctex-3; mPcl1; AW557215	PHF2; D17Ertd455e; Tctex3; Tctex-3; mPcl1; AW557215
Mus musculus	RefSeq	ILMN_208680	ILMN_208680	PHF1	NM_009343.2	NM_009343.2		21652	111185927	NM_009343.2	Phf1	NP_033369.2	ILMN_2588515	001190274	S	2307	TTTGTTACAGCTTTTGAGATAATTTTTTAAGACTATTTAACCCCTGGGAT	17	+	27074713-27074762	17qA3.3	Mus musculus PHD finger protein 1 (Phf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	PHF2; D17Ertd455e; Tctex3; Tctex-3; mPcl1; AW557215	PHF2; D17Ertd455e; Tctex3; Tctex-3; mPcl1; AW557215
Mus musculus	RefSeq	ILMN_233910	ILMN_233910	LOC329575	NM_001024849.1	NM_001024849.1		329575	85701571	NM_001024849.1	LOC329575	NP_001020020.1	ILMN_3066673	002320253	I	116	GATGACGTGCATGTGAACTTTACTCAGGAAGAATGGGCTTTGCTGGATCC	2	-	177569286-177569335	2qH4	Mus musculus hypothetical LOC329575 (LOC329575), mRNA.					
Mus musculus	RefSeq	ILMN_233910	ILMN_233910	LOC329575	NM_001024849.1	NM_001024849.1		329575	85701571	NM_001024849.1	LOC329575	NP_001020020.1	ILMN_3144820	002760519	A	1806	ACCCTATGAATGTAACCAATGTGGTAAAGCCTTTGCAAGAAGTGGTGACC	2	-	177566800-177566849	2qH4	Mus musculus hypothetical LOC329575 (LOC329575), mRNA.					
Mus musculus	RefSeq	ILMN_207442	ILMN_225181	CEP120	NM_178686.3	NM_178686.3		225523	61098172	NM_178686.3	Cep120	NP_848801.2	ILMN_2587637	007650452	S	464	CCTCACTTTGGAGACAGATACAAAGGCCCAGGTGGATAGTTATAAAGCAA	18	-	53895323-53895372	18qD1	Mus musculus centrosomal protein 120 (Cep120), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle [goid 22027] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles [goid 30953] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton [goid 32886] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	A230075C01; AU016693	A230075C01; AU016693
Mus musculus	RefSeq	ILMN_225181	ILMN_225181	CEP120	NM_178686.3	NM_178686.3		225523	61098172	NM_178686.3	Cep120	NP_848801.2	ILMN_2865939	006940528	S	4377	GGCCCAGCGTTGGTTCTTCCTCCTGTATCCTGTGAGGCCTGGAGCTTTTC	18	-	53841504-53841553	18qD1	Mus musculus centrosomal protein 120 (Cep120), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle [goid 22027] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles [goid 30953] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton [goid 32886] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	A230075C01; AU016693	A230075C01; AU016693
Mus musculus	RefSeq	ILMN_192260	ILMN_225181	CEP120	NM_178686.3	NM_178686.3		225523	61098172	NM_178686.3	Cep120	NP_848801.2	ILMN_1254240	002370242	S	4227	GCAGTAAACAACAGAGGGGTTGCTGGACTTGAGGGTGACGAGACAGATGA	18	-	53841654-53841703	18qD1	Mus musculus centrosomal protein 120 (Cep120), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle [goid 22027] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles [goid 30953] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton [goid 32886] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	A230075C01; AU016693	A230075C01; AU016693
Mus musculus	Riken	ILMN_203638	ILMN_203638	CISH2	ri|8030460M17|PX00103N23|AK033206|4243					AK033206	Cish2		ILMN_1250749	001260167	S	3915	GGGTGACCTTGAACTCACCAAATAGCCAAACATGGCCTGGATTCTGATCC										
Mus musculus	RefSeq	ILMN_218398	ILMN_218398	RHBDL2	NM_183163.2	NM_183163.2		230726	126723320	NM_183163.2	Rhbdl2	NP_898986.2	ILMN_2891245	002970307	S	1165	GTTCCAGGTCAGCCAGGGCTACACAGAAAAACCCTGTCTCAAAACCCCCC	4	+	123507095-123507144	4qD2.2	Mus musculus rhomboid, veinlet-like 2 (Drosophila) (Rhbdl2), mRNA.				9130416B15	9130416B15
Mus musculus	RefSeq	ILMN_214824	ILMN_261419	CD74	NM_001042605.1	NM_001042605.1		16149	110624769	NM_001042605.1	Cd74	NP_001036070.1	ILMN_1221817	006770195	S	1037	TTGAGACTGGTGTCTGTTTCATCGTCCCAGGACACGGCAAATGAAGTCAG	18	+	60971928-60971977	18qE1	Mus musculus CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) (Cd74), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IMP]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell differentiation [goid 45581] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IDA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IMP]	Interacting selectively with major histocompatibility complex class II molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ia-GAMMA; Ii; DHLAG; HLADG; CLIP	Ia-GAMMA; Ii; DHLAG; HLADG; CLIP
Mus musculus	RefSeq	ILMN_218591	ILMN_261419	CD74	NM_001042605.1	NM_001042605.1		16149	110624769	NM_001042605.1	Cd74	NP_001036070.1	ILMN_1247832	006130072	S	716	TTCCGTCCCAAGTGCGACGAGAACGGTAACTATTTGCCACTCCAGTGCCA	18	+	60971004-60971053	18qE1	Mus musculus CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) (Cd74), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IMP]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell differentiation [goid 45581] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IDA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IMP]	Interacting selectively with major histocompatibility complex class II molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ia-GAMMA; Ii; DHLAG; HLADG; CLIP	Ia-GAMMA; Ii; DHLAG; HLADG; CLIP
Mus musculus	MEEBO	ILMN_184494	ILMN_184494	A330104J06RIK	scl32049.3.7_25						A330104J06Rik		ILMN_1221676	005820100	S	1	GACAGGACCCAGGCAATGAAAGCATACAGAAGGTTCCAGTGACAATCGGA										
Mus musculus	MEEBO	ILMN_213005	ILMN_213005	1110018J23RIK	scl073713.3_139	XM_140742.4			38085198	XM_140742.4	1110018J23Rik		ILMN_1220508	006940296	S	5257	TAGCGGTCAGGCTTCCCATTCTTGGACAGTCCGAGGCGGTGATCTTTAAG										
Mus musculus	RefSeq	ILMN_220431	ILMN_220431	HAVCR2	NM_134250.1	NM_134250.1		171285	21703359	NM_134250.1	Havcr2	NP_599011.1	ILMN_2721929	000060603	S	2190	CAGAAGAACAACCGGTGACTGGGACATACGAAGGCAGAGCTCTTGCAGCA	11	+	46294226-46294275	11qB1.1	Mus musculus hepatitis A virus cellular receptor 2 (Havcr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Timd3; Tim3; MGC124150; MGC124149	Timd3; Tim3; MGC124150; MGC124149
Mus musculus	RefSeq	ILMN_220431	ILMN_220431	HAVCR2	NM_134250.1	NM_134250.1		171285	21703359	NM_134250.1	Havcr2	NP_599011.1	ILMN_2909597	000870066	S	2449	GCATTGGGGAGCAACTGTGTACATCAGAGGACATCTGTTAGTGAGGACAC	11	+	46294485-46294534	11qB1.1	Mus musculus hepatitis A virus cellular receptor 2 (Havcr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Timd3; Tim3; MGC124150; MGC124149	Timd3; Tim3; MGC124150; MGC124149
Mus musculus	RefSeq	ILMN_199016	ILMN_199016	LOC212815	XM_137024.2	XM_137024.2			38090445	XM_137024.2	LOC212815		ILMN_2533751	005810128	S	996	GGGGACCTGCCCCTTTGGAAGCAAGTGCCTTTACCACCATGCTTACCCTC										
Mus musculus	RefSeq	ILMN_199341	ILMN_199341	LOC382200	XM_358714.1	XM_358714.1			38097174	XM_358714.1	LOC382200		ILMN_2534899	002230193	S	131	CACGGGTTACAGTTTTAACAGCATTTACCTGCAGTTGGAAATTTCCTGGC										
Mus musculus	MEEBO	ILMN_190630	ILMN_190630	D530005L17RIK	scl25316.14.1_20				31341433	NM_177385	D530005L17Rik		ILMN_1251974	002680709	S	1955	TTTCTGGTTTGCTATTGCTTTTTGAGGAACAACATTTTTTATTTTTGTAC										
Mus musculus	RefSeq	ILMN_254175	ILMN_254175	V2R8	NM_009494.1	NM_009494.1		22314	6678544	NM_009494.1	V2r8	NP_033520.1	ILMN_2992339	004900605	S	2354	TGAGGTTACCCTACTGTCTGTGAACAGCGCCACCTCTAGGCATGCTGTCC	X	+	11724-11773		Mus musculus vomeronasal 2, receptor, 8 (V2r8), mRNA.					
Mus musculus	RefSeq	ILMN_198513	ILMN_198513	LOC243868	XM_145418.2	XM_145418.2			38085925	XM_145418.2	LOC243868		ILMN_1215103	006060241	S	407	ACGGTGCTGTCGCTGCGGGAGGATGTGGAATACCTGGAGAACATGCTGGA										
Mus musculus	RefSeq	ILMN_214954	ILMN_214954	E030002O03RIK	NM_172905.2	NM_172905.2		244180	40254252	NM_172905.2	E030002O03Rik	NP_766493.1	ILMN_2795751	003990014	S	2129	GTAAAACTGGAAGAGGCACTTGGGCCTGACTGTGTTCTAGGATGTAAGGC	7	-	111301601-111301650	7qE3	Mus musculus RIKEN cDNA E030002O03 gene (E030002O03Rik), mRNA.				D930003D22	D930003D22
Mus musculus	MEEBO	ILMN_193082	ILMN_193082	8430411E10RIK	scl45184.1.1_44						8430411E10Rik		ILMN_2493942	002850408	S	4	GAAAGAATTAATATTGTGTAATTAGTTATTGGCTCAATCTGTATGTTAAA										
Mus musculus	RefSeq	ILMN_185126	ILMN_252544	LUZP2	NM_178705.5	NM_178705.5		233271	134053918	NM_178705.5	Luzp2	NP_848820.4	ILMN_1256309	002810373	S	5137	GGCGACTATACTGGCAAATGCTCACATCTCCAAGCTATGTATTCATCTGG	7	+	62524121-62524170	7qB5	Mus musculus leucine zipper protein 2 (Luzp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D130073E01; 9330154K17Rik	D130073E01; 9330154K17Rik
Mus musculus	Riken	ILMN_204990	ILMN_204990	9330151E04RIK	ri|9330151E04|PX00105A03|AK034042|2469					AK034042	9330151E04Rik		ILMN_1214832	003450754	S	2100	ATCAGACACTTCCCTACCCATCCAAGAGTGGCCTCGGACCTCTCGTTTTC										
Mus musculus	RefSeq	ILMN_194714	ILMN_194714	WIF1	NM_011915.1	NM_011915.1		24117	6755998	NM_011915.1	Wif1	NP_036045.1	ILMN_2857748	004570070	S	1579	TGTGGTCTTAGAATGGGGAGTGTTAGAGAGGTTAAACTGGGCAGAGATGC	10	+	120537261-120537310	10qD2	Mus musculus Wnt inhibitory factor 1 (Wif1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence ISO]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with Wnt-protein, a secreted growth factor involved in signaling [goid 17147] [evidence ISO]	AW107799	AW107799
Mus musculus	RefSeq	ILMN_207507	ILMN_207507	TGTP	XM_135587.1	XM_135587.1			20917993	XM_135587.1	Tgtp		ILMN_1260487	006350224	I	134	AGGAGAATATATGGAGTGGGGCATTCCTTCTAGGCTCTGCCCAAGTTACC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]		
Mus musculus	RefSeq	ILMN_212963	ILMN_212963	SFXN5	NM_178639.2	NM_178639.2		94282	31340911	NM_178639.2	Sfxn5	NP_848754.1	ILMN_2632073	007160678	S	3253	CAGCTCTGATGTTCCTGGCCAACTCTCCTCTGATAACTTTTAAACATTCC	6	-	85179057-85179106	6qC3	Mus musculus sideroflexin 5 (Sfxn5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	C230001H08Rik	C230001H08Rik
Mus musculus	RefSeq	ILMN_198237	ILMN_198237	LOC240131	XM_140154.1	XM_140154.1			20901500	XM_140154.1	LOC240131		ILMN_1224302	007000088	S	572	ACGTGGGCTCCAATCGCCTAGAAAACATCGCTGAGAGCATCCAGTGCCTG										
Mus musculus	MEEBO	ILMN_190935	ILMN_190935	THY1	scl6595.1.1_7						Thy1		ILMN_2474578	006650402	S	7	CAGGTACAGGCACAGTCCAACTTCCCTCATCCATATCTCTTTCAGGCATC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision [goid 46549] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]			
Mus musculus	RefSeq	ILMN_213581	ILMN_213581	SRD5A3	NM_020611.3	NM_020611.3		57357	27881426	NM_020611.3	Srd5a3	NP_065636.2	ILMN_2883138	005910397	S	1279	CGGGTGTCTCCAAACTGCTTTCTGGCCGCACTAACCAGTATAAACAGCTG	5	+	76578594-76578643	5qC3.3	Mus musculus steroid 5 alpha-reductase 3 (Srd5a3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor [goid 3865] [evidence IEA]	1110025P14Rik; A430076C09; AV364670; H5ar; AW987574; D730040M03Rik	1110025P14Rik; A430076C09; AV364670; H5ar; AW987574; D730040M03Rik
Mus musculus	RefSeq	ILMN_213581	ILMN_213581	SRD5A3	NM_020611.3	NM_020611.3		57357	27881426	NM_020611.3	Srd5a3	NP_065636.2	ILMN_2683222	005260451	S	1125	GCGGGAATGTTTGACGGTCCTTGTTCTACTTCAGAGCCAGCCGAGCAGTG	5	+	76577618-76577667	5qC3.3	Mus musculus steroid 5 alpha-reductase 3 (Srd5a3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor [goid 3865] [evidence IEA]	1110025P14Rik; A430076C09; AV364670; H5ar; AW987574; D730040M03Rik	1110025P14Rik; A430076C09; AV364670; H5ar; AW987574; D730040M03Rik
Mus musculus	RefSeq	ILMN_213581	ILMN_213581	SRD5A3	NM_020611.3	NM_020611.3		57357	27881426	NM_020611.3	Srd5a3	NP_065636.2	ILMN_1248812	002230278	S	1122	CTGCGGGAATGTTTGACGGTCCTTGTTCTACTTCAGAGCCAGCCGAGCAG	5	+	76577615-76577664	5qC3.3	Mus musculus steroid 5 alpha-reductase 3 (Srd5a3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor [goid 3865] [evidence IEA]	1110025P14Rik; A430076C09; AV364670; H5ar; AW987574; D730040M03Rik	1110025P14Rik; A430076C09; AV364670; H5ar; AW987574; D730040M03Rik
Mus musculus	MEEBO	ILMN_209678	ILMN_209678	REX3	scl53815.3_1	NM_009052.1			6677720	NM_009052.1	Rex3		ILMN_2598147	006270519	S	707	GGCCTATAATTCTTTTGTTAGCAGAATTTATCAATTGCATGGGAAGATCC										
Mus musculus	RefSeq	ILMN_256095	ILMN_256095	NUDT10	NM_001031664.1	NM_001031664.1		102954	72384356	NM_001031664.1	Nudt10	NP_001026834.1	ILMN_2974709	001850291	S	1342	GGAGGCTGAACCTGTGGGTTGAGAAAGGCTTCAGAGAATGATCAGTACCT	X	-	5746173-5746222	XqA1.1	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 10 (Nudt10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: diphospho-myo-inositol polyphosphate + H2O = myo-inositol polyphosphate + phosphate [goid 8486] [evidence IDA]	Dipp3a; AI853080	Dipp3a; AI853080
Mus musculus	RefSeq	ILMN_221241	ILMN_221241	ITFG1	NM_028007.2	NM_028007.2		71927	141802868	NM_028007.2	Itfg1	NP_082283.1	ILMN_2732919	006960152	S	1964	AAATTATGCCTTCCTTGTCAATTATTGGAAAATACTGAAATAAATATGGC	8	-	88242620-88242669	8qC3	Mus musculus integrin alpha FG-GAP repeat containing 1 (Itfg1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI314457; D8Wsu49e; 2310047C21Rik; Cda08	AI314457; D8Wsu49e; 2310047C21Rik; Cda08
Mus musculus	MEEBO	ILMN_214322	ILMN_214322	PRM3	scl48766.1.17_61	NM_013638.1			7305410	NM_013638.1	Prm3		ILMN_1219477	001850093	S	231	CTGGAGCCCGAAAAGCAAGAGAGCGCCGAGGATGGGGAGGCCCAGCCAAG						A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185099	ILMN_235001	DLGAP4	NM_146128.5	NM_146128.5		228836	109891943	NM_146128.5	Dlgap4	NP_666240.4	ILMN_2723755	001580711	S	1902	CACTCGACTTGCCGCTGCCCAGCTACTTCCGCTCACGCAGCCACAGCTAC	2	+	156536989-156536997:156571571-156571611	2qH1	Mus musculus discs, large homolog-associated protein 4 (Drosophila) (Dlgap4), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]		BC024558; mKIAA0964; KIAA0964; WBP16; MGC37636; AI225853; Sapap4; MGC117830; DAP4	BC024558; mKIAA0964; KIAA0964; WBP16; MGC37636; AI225853; Sapap4; MGC117830; DAP4
Mus musculus	Riken	ILMN_204025	ILMN_204025	A630097D09RIK	ri|A630097D09|PX00148I01|AK042500|2589					AK042500	A630097D09Rik		ILMN_1222346	001500189	S	2448	CCTGCCCTTGACCCAGACAAGGCTAGGGCTGCCAGTCCTTTGATTTTGAG										
Mus musculus	Riken	ILMN_203023	ILMN_203023	DCN	ri|6030435H14|PX00056N18|AK031456|3724					AK031456	Dcn		ILMN_1254458	000130047	S	3633	GGAGGCCCAGCAGTTGAGCCAAAGGTTAATGCATTGGCTTCCCATGGCAG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_204594	ILMN_204594	C130048C12RIK	ri|C130048C12|PX00170M05|AK048308|1745					AK048308	C130048C12Rik		ILMN_1215413	000580440	S	1464	CCTCCACTTTCTCCACATGCTGTCAGTATTCACACACAGAGCAGAGGAAG										
Mus musculus	RefSeq	ILMN_221306	ILMN_256178	MKNK2	NM_021462.3	NM_021462.3		17347	133892866	NM_021462.3	Mknk2	NP_067437.1	ILMN_2733887	002690195	S	2830	CTTCCAAGCCCGACCTGGAGGATGGGTCAGACCCCTTAACTGTGAATGAG	10	-	80128262-80128311	10qC1	Mus musculus MAP kinase-interacting serine/threonine kinase 2 (Mknk2), mRNA.		A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2010016G11Rik; Mnk2; Gprk7	2010016G11Rik; Mnk2; Gprk7
Mus musculus	RefSeq	ILMN_198817	ILMN_254359	OLFR532	NM_147026.1	NM_147026.1		259028	49227414	NM_147026.1	Olfr532	NP_667237.1	ILMN_1218630	000520360	S	778	CTACAGCCTGGCTCTGGATCCTCCTTCCAGAATAGCAAGGTTGTTACCTT	7	-	147604843-147604892	7qF4	Mus musculus olfactory receptor 532 (Olfr532), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR251-1	MOR251-1
Mus musculus	RefSeq	ILMN_254359	ILMN_254359	OLFR532	NM_147026.1	NM_147026.1		259028	49227414	NM_147026.1	Olfr532	NP_667237.1	ILMN_2895651	000010189	S	645	GATATCCTACAGCTTCATCATTTCCAGCATCCTGCGCATTCGCTCAGCCG	7	-	147604976-147605025	7qF4	Mus musculus olfactory receptor 532 (Olfr532), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR251-1	MOR251-1
Mus musculus	RefSeq	ILMN_210623	ILMN_210623	4933424B01RIK	NM_138757.2	NM_138757.2		71177	133922585	NM_138757.2	4933424B01Rik	NP_620096.2	ILMN_1252267	007210288	S	1840	GACCCCAGATATAAAATCGATGCAAGTCTAGAGATCCCGTTGGAGCGTGC	6	-	146503525-146503574	6qG3	Mus musculus RIKEN cDNA 4933424B01 gene (4933424B01Rik), mRNA.				MGC28965	MGC28965
Mus musculus	RefSeq	ILMN_210623	ILMN_210623	4933424B01RIK	NM_138757.2	NM_138757.2		71177	133922585	NM_138757.2	4933424B01Rik	NP_620096.2	ILMN_2694356	004590630	S	2431	CCTCCAAACAAAAAGCCCCTTGTTGAAACGGATGAGACACCACACATGGA	6	-	146500904-146500953	6qG3	Mus musculus RIKEN cDNA 4933424B01 gene (4933424B01Rik), mRNA.				MGC28965	MGC28965
Mus musculus	RefSeq	ILMN_255007	ILMN_255007	ARG1	NM_007482.2	NM_007482.2		11846	31982504	NM_007482.2	Arg1	NP_031508.1	ILMN_2952275	001190445	S	996	CTCAACGGGAGGGTAACCATAAGCCAGGGACTGACTACCTTAAACCACCT	10	-	24635421-24635470	10qA4	Mus musculus arginase 1, liver (Arg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6525] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2 [goid 16813] [evidence IEA]; Catalysis of the reaction: L-arginine + H2O = L-ornithine + urea [goid 4053] [evidence IDA]	AI256583; PGIF; AI; Arg-1; arginase I	AI256583; PGIF; AI; Arg-1; arginase I
Mus musculus	RefSeq	ILMN_214836	ILMN_214836	HSD11B1	NM_008288.2	NM_008288.2		15483	113680740	NM_008288.2	Hsd11b1	NP_032314.2	ILMN_3041149	003850398	I	44	GCAACCAGAGATAGGCAGCCAATAAAAAGGAGCCGCACTTATCTGAAGCC	1	-	195090146-195090195	1qH6	Mus musculus hydroxysteroid 11-beta dehydrogenase 1 (Hsd11b1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+ [goid 3845] [evidence IDA]; Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+ [goid 3845] [evidence IMP]		
Mus musculus	RefSeq	ILMN_214836	ILMN_214836	HSD11B1	NM_008288.2	NM_008288.2		15483	113680740	NM_008288.2	Hsd11b1	NP_032314.2	ILMN_3115917	004050369	A	1014	GCCCTGGTGAGTGGTCTTAGAACAGTCCTGCCTGATACTTCTGTAAGCCC	1	-	195048144-195048193	1qH6	Mus musculus hydroxysteroid 11-beta dehydrogenase 1 (Hsd11b1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+ [goid 3845] [evidence IDA]; Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+ [goid 3845] [evidence IMP]		
Mus musculus	RefSeq	ILMN_222823	ILMN_222823	ATP6V1E2	NM_029121.2	NM_029121.2		74915	42475953	NM_029121.2	Atp6v1e2	NP_083397.2	ILMN_2755322	003610605	S	685	GGTGGAGGTCTACAGCAGCGATCAGAAAATAAAGGTTTCCAACACCCTGG	17	-	87343719-87343768	17qE4	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit E2 (Atp6v1e2), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IMP]	Atp6e1; E1; 4930500C14Rik	Atp6e1; E1; 4930500C14Rik
Mus musculus	MEEBO	ILMN_218343	ILMN_218343	COMT	scl0001894.1_46	XM_147265.1			20891972	XM_147265.1	Comt		ILMN_2703444	001240259	S	753	ATGTGGCCTGCTGCGCAAGGGGACGGTGCTCCTAGCTGACAATGTCATTG										
Mus musculus	RefSeq	ILMN_223358	ILMN_223358	AVEN	NM_028844.1	NM_028844.1		74268	21312683	NM_028844.1	Aven	NP_083120.1	ILMN_2919343	002060564	S	988	GCAGCCAAGCACATCGAAGAATGTCACCGAGGAAGAGCTGGAGGACTGGC	2	+	112431665-112431714	2qE3	Mus musculus apoptosis, caspase activation inhibitor (Aven), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	MGC124011; mAven-L; 1700056A21Rik; 1700013A01Rik; mAven-S	MGC124011; mAven-L; 1700056A21Rik; 1700013A01Rik; mAven-S
Mus musculus	RefSeq	ILMN_210593	ILMN_210593	TEAD1	NM_009346.2	NM_009346.2		21676	118130427	NM_009346.2	Tead1	NP_033372.1	ILMN_2607207	002600224	S	1974	TTTGTAACTAATTAGGATGGAAGTTATGGAAGAATGTAATTCACTAAATT	7	+	120042667-120042716	7qF1	Mus musculus TEA domain family member 1 (Tead1), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IGI]	Gtrgeo5; mTEF-1; TEAD-1; Tcf13; TEF-1	Gtrgeo5; mTEF-1; TEAD-1; Tcf13; TEF-1
Mus musculus	RefSeq	ILMN_211841	ILMN_211841	EXOSC1	NM_025644.3	NM_025644.3		66583	31981244	NM_025644.3	Exosc1	NP_079920.1	ILMN_1224534	001240189	S	692	GGTACCTGCGGTCAGCTGGCAACCATCTCTTGAAACAATGTGCCGGAAAT	19	-	41998330-41998379	19qC3	Mus musculus exosome component 1 (Exosc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; Complex of 3'-5' exoribonucleases [goid 178] [evidence ISO]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	2610035C18Rik; 2610312F07Rik; AI447561; 2610104C07Rik	2610035C18Rik; 2610312F07Rik; AI447561; 2610104C07Rik
Mus musculus	RefSeq	ILMN_221630	ILMN_248240	1600025M17RIK	XM_983040.1	XM_983040.1		72030	94407458	XM_983040.1	1600025M17Rik	XP_988134.1	ILMN_2738127	001580451	S	745	AACATGAGGCCGTTCCCAGACCAGCGAGAGCGAGCACCAGCAGGAAGGCA	X	+	53573543-53573592	XqA5	PREDICTED: Mus musculus RIKEN cDNA 1600025M17 gene (1600025M17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_243482	ILMN_243482	GOLM1	NM_001035122.2	NM_001035122.2		105348	93141216	NM_001035122.2	Golm1	NP_001030294.1	ILMN_3148550	002100286	A	3275	CCTACACCTCAGGGCACTTGGGACTTCAGCTGGAACAAAGGGATGCACCA	13	-	59736589-59736638	13qB2	Mus musculus golgi membrane protein 1 (Golm1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Golph2; AW125446; MGC107447; PSEC0257; GP73; D030064E01Rik; 2310001L02Rik	Golph2; AW125446; MGC107447; PSEC0257; GP73; D030064E01Rik; 2310001L02Rik
Mus musculus	RefSeq	ILMN_222492	ILMN_222492	SEPT2	NM_010891.1	NM_010891.1		18000	6754815	NM_010891.1	Sept2	NP_035021.1	ILMN_2756696	004010195	S	1790	GCACAATTATCTGTTAACCAGGTAGAACAGAAGAGAGTTATCTAATGAGA	1	+	95404928-95404977	1qD	Mus musculus septin 2 (Sept2), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]; A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells. In animal cells, the contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis [goid 5826] [evidence NAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence TAS]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence TAS]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence TAS]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence TAS]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence NAS]; Any process that modulates the frequency, rate or extent of L-glutamate transport [goid 2036] [evidence IDA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence TAS]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IDA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulates the activity of an enzyme [goid 30234] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence TAS]; Functions to provide a physical support for the assembly of a multiprotein complex [goid 32947] [evidence IDA]	mKIAA0158; Nedd5; AW208991	mKIAA0158; Nedd5; AW208991
Mus musculus	RefSeq	ILMN_222492	ILMN_222492	SEPT2	NM_010891.1	NM_010891.1		18000	6754815	NM_010891.1	Sept2	NP_035021.1	ILMN_2914510	004010477	S	2976	TGGCAGTGTGGATTGTGAGGTCTTGCAGCCACAATTCTAACCCCCTTCAG	1	+	95406114-95406163	1qD	Mus musculus septin 2 (Sept2), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]; A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells. In animal cells, the contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis [goid 5826] [evidence NAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence TAS]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence TAS]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence TAS]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence TAS]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence NAS]; Any process that modulates the frequency, rate or extent of L-glutamate transport [goid 2036] [evidence IDA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence TAS]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IDA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulates the activity of an enzyme [goid 30234] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence TAS]; Functions to provide a physical support for the assembly of a multiprotein complex [goid 32947] [evidence IDA]	mKIAA0158; Nedd5; AW208991	mKIAA0158; Nedd5; AW208991
Mus musculus	RefSeq	ILMN_248595	ILMN_213989	SLC25A15	NM_181325.3	NM_181325.3		18408	141802645	NM_181325.3	Slc25a15	NP_851842.1	ILMN_3163476	004010201	A	1311	TATACAGGGGAACTGGTGGCCTTATACACTAGCCTTATGCACCAGCCTCG	8	-	23488048-23488097	8qA2	Mus musculus solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 (Slc25a15), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ornt1; D630044L02Rik	Ornt1; D630044L02Rik
Mus musculus	RefSeq	ILMN_220940	ILMN_220940	SNTG2	NM_172951.1	NM_172951.1		268534	27370463	NM_172951.1	Sntg2	NP_766539.1	ILMN_2985548	001110471	S	1315	GGGCAGTGAGCTGGCCGTGTGGGAGAAGGCATTCCAAAGAGCAACTTTCA	12	-	30812838-30812887	12qA2	Mus musculus syntrophin, gamma 2 (Sntg2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BB121248; 2210008K22Rik; 9530013L23	BB121248; 2210008K22Rik; 9530013L23
Mus musculus	RefSeq	ILMN_254659	ILMN_254659	FANCC	NM_001042673.1	NM_001042673.1		14088	111185911	NM_001042673.1	Fancc	NP_001036138.1	ILMN_3144458	004610484	A	1784	TGGACAGCTGGTCAGACGCCTTCTTCTTAGTCTCTTGCTCTGGACCCCAG	13	-	63418694-63418743	13qB3	Mus musculus Fanconi anemia, complementation group C (Fancc), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IMP]		Facc; BB116513	Facc; BB116513
Mus musculus	RefSeq	ILMN_254659	ILMN_254659	FANCC	NM_001042673.1	NM_001042673.1		14088	111185911	NM_001042673.1	Fancc	NP_001036138.1	ILMN_3066293	002360376	I	2932	GCCACGGTCAGGAGAAAAACCTGGTAGGAACTTGGCACTGGCCTGGAGTG	13	-	63406203-63406252	13qB3	Mus musculus Fanconi anemia, complementation group C (Fancc), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IMP]		Facc; BB116513	Facc; BB116513
Mus musculus	RefSeq	ILMN_217224	ILMN_217224	9930111J21RIK	NM_173434.1	NM_173434.1		245240	27734111	NM_173434.1	9930111J21Rik	NP_775610.1	ILMN_2685088	007560593	S	1911	CGTGAAGGGTGAGGGTTAGGGTTTAGTCTTGGCTGATGCCCAGTTTTCCC	11	-	48851604-48851653	11qB1.2	Mus musculus RIKEN cDNA 9930111J21 gene (9930111J21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197360	ILMN_197360	LOC195488	XM_111843.3	XM_111843.3			38075340	XM_111843.3	LOC195488		ILMN_1227692	003440553	S	997	AAGCACGACCTGCTGAGGTTGGCAAAGGAGGCGATCCTGGCTGCCCGGCA										
Mus musculus	RefSeq	ILMN_210299	ILMN_210299	SEMA5A	NM_009154.2	NM_009154.2		20356	119226252	NM_009154.2	Sema5a	NP_033180.2	ILMN_2604226	006020274	S	10645	CCCGCTCATCGTCTCTCTGCCAACGTTTTGTGAAAACTAAAAGAATCCTA	15	+	32625932-32625981	15qB3.1	Mus musculus sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A (Sema5a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	 [goid 8046] [evidence IDA]	Semaf; semF; 5930434A13; 9130201M22Rik; AI464145	Semaf; semF; 5930434A13; 9130201M22Rik; AI464145
Mus musculus	RefSeq	ILMN_221639	ILMN_221639	DUSP19	NM_024438.2	NM_024438.2		68082	31980900	NM_024438.2	Dusp19	NP_077758.1	ILMN_2898495	006860164	S	1178	CCTGAGAACCTTTGAAGTGATGAACTTACTAAGTGAAGACTTAGCATTTC	2	+	80432215-80432264	2qC3	Mus musculus dual specificity phosphatase 19 (Dusp19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]; Catalysis of the reaction: protein threonine/tyrosine phosphate + H2O = protein threonine/tyrosine + phosphate [goid 8330] [evidence IDA]; Catalysis of the reaction: JUN kinase serine/threonine/tyrosine phosphate + H2O = JUN kinase serine/threonine/tyrosine + phosphate [goid 8579] [evidence IDA]	C79103; 5930436K22Rik; SKRP1; TS-DSP1	C79103; 5930436K22Rik; SKRP1; TS-DSP1
Mus musculus	RefSeq	ILMN_219650	ILMN_219650	PTGER2	NM_008964.3	NM_008964.3		19217	144227232	NM_008964.3	Ptger2	NP_032990.1	ILMN_1223571	004260424	S	1867	GCAGACAAGTTGCTGTCTCGTGATTGCTTAATGGACTCTTTATTTGGACC	14	+	45622074-45622123	14qC1	Mus musculus prostaglandin E receptor 2 (subtype EP2) (Ptger2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a thromboxane (TXA) to initiate a change in cell activity [goid 4960] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]	EP2; Ptgerep2	EP2; Ptgerep2
Mus musculus	RefSeq	ILMN_210918	ILMN_210918	GREM2	NM_011825.1	NM_011825.1		23893	6754069	NM_011825.1	Grem2	NP_035955.1	ILMN_2610565	004780056	S	3312	CGGGGGGCTTGGGATCTTCTAGGAGAATTAGAAACAGGCATCAAACAAGA	1	-	176764299-176764348	1qH3	Mus musculus gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis) (Grem2), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	Prdc; Gremlin2	Prdc; Gremlin2
Mus musculus	RefSeq	ILMN_200012	ILMN_200012	LOC383098	XM_356872.1	XM_356872.1			38079851	XM_356872.1	LOC383098		ILMN_2537283	007400487	S	52	GCTCAGCACCTGATCTACCGCTTCCCTGACGTGATCCTTGAATGCCTCGG										
Mus musculus	RefSeq	ILMN_212426	ILMN_224412	RBM12	NM_170598.2	NM_170598.2		75710	114155124	NM_170598.2	Rbm12	NP_733486.2	ILMN_1221822	004290019	S	3548	AAATAGAAACGTGAGTAGAGCTCGTGGAGGGGGCTCATGCCAGTGATGGC	2	-	155920740-155920789	2qH1	Mus musculus RNA binding motif protein 12 (Rbm12), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	mKIAA0765; 9430070C08Rik; MGC30712; MGC38279; 5730420G12Rik; AI852903; SWAN	mKIAA0765; 9430070C08Rik; MGC30712; MGC38279; 5730420G12Rik; AI852903; SWAN
Mus musculus	RefSeq	ILMN_212426	ILMN_224412	RBM12	NM_170598.2	NM_170598.2		75710	114155124	NM_170598.2	Rbm12	NP_733486.2	ILMN_2707710	004610594	S	3557	CGTGAGTAGAGCTCGTGGAGGGGGCTCATGCCAGTGATGGCATTGGAAGT	2	-	155920731-155920780	2qH1	Mus musculus RNA binding motif protein 12 (Rbm12), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	mKIAA0765; 9430070C08Rik; MGC30712; MGC38279; 5730420G12Rik; AI852903; SWAN	mKIAA0765; 9430070C08Rik; MGC30712; MGC38279; 5730420G12Rik; AI852903; SWAN
Mus musculus	RefSeq	ILMN_216278	ILMN_216278	RABGGTA	NM_019519.2	NM_019519.2		56187	118130666	NM_019519.2	Rabggta	NP_062392.1	ILMN_1217320	001980685	S	88	TTCGGAAAGATCCGTGGGGACGGAGGCCGTGGTTGTGGTGAGCGCTTCCT	14	-	56340876-56340925	14qC3	Mus musculus Rab geranylgeranyl transferase, a subunit (Rabggta), mRNA.		The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]; The enzymatic addition of a geranylgeranyl moiety to a protein as a posttranslational modification [goid 18344] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]; Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein [goid 8318] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IMP]	gm	gm
Mus musculus	RefSeq	ILMN_216278	ILMN_216278	RABGGTA	NM_019519.2	NM_019519.2		56187	118130666	NM_019519.2	Rabggta	NP_062392.1	ILMN_1245469	004900692	S	1999	GAGATGCTACCGTCCGTCAGCAGCATCCTCACCTAGGAGGCCCCATCTCA	14	-	56335212-56335226:56335227-56335261	14qC3	Mus musculus Rab geranylgeranyl transferase, a subunit (Rabggta), mRNA.		The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]; The enzymatic addition of a geranylgeranyl moiety to a protein as a posttranslational modification [goid 18344] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]; Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein [goid 8318] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IMP]	gm	gm
Mus musculus	RefSeq	ILMN_201241	ILMN_201241	LOC384976	XM_357969.1	XM_357969.1			38090087	XM_357969.1	LOC384976		ILMN_2541595	002120482	S	146	CAGGAGAGTCACCCACCAAGGCAGACAACCAAGCAATGCTGGCGTCAAGA										
Mus musculus	RefSeq	ILMN_197122	ILMN_197122	LOC381330	XM_355288.1	XM_355288.1			38074175	XM_355288.1	LOC381330		ILMN_2526987	004560692	S	401	GGCGGAAACTGGATCCTGGGAAAAAGGAAACCCAGACCCTGGTTCGAGAG										
Mus musculus	RefSeq	ILMN_189281	ILMN_229573	TXK	NM_013698.1	NM_013698.1		22165	7305600	NM_013698.1	Txk	NP_038726.1	ILMN_2459924	007150561	S	2209	TTCAACAGTTTCATGTTTGGGGCTGTATAAATGTTTATAGGAAACATAGC	5	-	73087302-73087351	5qC3.2	Mus musculus TXK tyrosine kinase (Txk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Btkl; Rlk; A130089B16Rik; PTK4	Btkl; Rlk; A130089B16Rik; PTK4
Mus musculus	Riken	ILMN_204745	ILMN_204745	B930062N16RIK	ri|B930062N16|PX00164D04|AK047436|3368					AK047436	B930062N16Rik		ILMN_1252311	006980465	S	3207	GTGGCCTCACCCTTCCCCTGTAGCGCAGCATTTGTGTATCTGTGACTTAC										
Mus musculus	RefSeq	ILMN_222914	ILMN_225848	LOC676389	XR_004916.1	XR_004916.1		676389	94395595	XR_004916.1	LOC676389		ILMN_2756678	005360278	S	4258	CATGAGGAAGCATGTGTTGACTTTATCATGGCTGCAGCTGACTCTCTCTC					PREDICTED: Mus musculus similar to Baculoviral IAP repeat-containing protein 1e (Neuronal apoptosis inhibitory protein 5) (LOC676389), misc RNA.					
Mus musculus	RefSeq	ILMN_200635	ILMN_200635	LOC384442	XM_357648.1	XM_357648.1			38084586	XM_357648.1	LOC384442		ILMN_2539460	007510156	S	277	GATCAGAAAGTGAAACCCAATACAGGCTTTGATGCTGCTGTGGCAGAGGC										
Mus musculus	RefSeq	ILMN_222936	ILMN_222936	HIST1H2BG	NM_178196.2	NM_178196.2		319181	40254304	NM_178196.2	Hist1h2bg	NP_835503.1	ILMN_1224479	003290703	S	576	GTGTGAAGAATATGTTTGCCTCAGTGTAACCAACGCGCTGCCAGATACAC	13	+	23663840-23663883	13qA3.1	Mus musculus histone cluster 1, H2bg (Hist1h2bg), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_199466	ILMN_244239	PARD3B	NM_001081050.1	NM_001081050.1		72823	124486671	NM_001081050.1	Pard3b	NP_001074519.1	ILMN_1219499	001440132	S	3106	GCTTCACCCCGAGGGCGCTACAATGACAGAGAGCTTCCATACTACCCAGG	1	+	62684174-62684223	1qC2	Mus musculus par-3 partitioning defective 3 homolog B (C. elegans) (Pard3b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PAR3beta; 2010002N16Rik; Als2cr19; 1810008K04Rik; RP23-20G7.1; PAR3L; PAR3B; 2810455B10Rik	PAR3beta; 2010002N16Rik; Als2cr19; 1810008K04Rik; RP23-20G7.1; PAR3L; PAR3B; 2810455B10Rik
Mus musculus	RefSeq	ILMN_244239	ILMN_244239	PARD3B	NM_001081050.1	NM_001081050.1		72823	124486671	NM_001081050.1	Pard3b	NP_001074519.1	ILMN_2860656	002350736	S	241	GACGAACAAGAGCCACTCCAAAAGACTGAGAGCCCCGGTGGAAACCCTGC	1	+	62056896-62056945	1qC2	Mus musculus par-3 partitioning defective 3 homolog B (C. elegans) (Pard3b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PAR3beta; 2010002N16Rik; Als2cr19; 1810008K04Rik; RP23-20G7.1; PAR3L; PAR3B; 2810455B10Rik	PAR3beta; 2010002N16Rik; Als2cr19; 1810008K04Rik; RP23-20G7.1; PAR3L; PAR3B; 2810455B10Rik
Mus musculus	RefSeq	ILMN_222404	ILMN_244239	PARD3B	NM_001081050.1	NM_001081050.1		72823	124486671	NM_001081050.1	Pard3b	NP_001074519.1	ILMN_2749138	004830026	S	2148	CAACGAGAGCTTCCGAGCAGCCATCGACAAATCGTACGATGGGCCAGAAG	1	+	62390653-62390702	1qC2	Mus musculus par-3 partitioning defective 3 homolog B (C. elegans) (Pard3b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PAR3beta; 2010002N16Rik; Als2cr19; 1810008K04Rik; RP23-20G7.1; PAR3L; PAR3B; 2810455B10Rik	PAR3beta; 2010002N16Rik; Als2cr19; 1810008K04Rik; RP23-20G7.1; PAR3L; PAR3B; 2810455B10Rik
Mus musculus	Riken	ILMN_203564	ILMN_203564	9430043H11RIK	ri|9430043H11|PX00109C08|AK034822|2742					AK034822	9430043H11Rik		ILMN_1225208	000450730	S	2514	ACCGTGGTAGAGTTCCAGTCACCCTCAGACATGGCTCTTGCCCACGTCAC										
Mus musculus	RefSeq	ILMN_191205	ILMN_191205	V1RD15	NM_203489.1	NM_203489.1		209824	45237184	NM_203489.1	V1rd15	NP_987074.1	ILMN_1219688	005270634	S	777	CTTTCAAACATTTTTTATAGATTCTCGTCTCTTTGTGAGGCATGTTGGTG	7	+	24840569-24840618	7qA3	Mus musculus vomeronasal 1 receptor, D15 (V1rd15), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gm476	Gm476
Mus musculus	RefSeq	ILMN_221316	ILMN_221316	GNB1	NM_008142.3	NM_008142.3		14688	111186467	NM_008142.3	Gnb1	NP_032168.1	ILMN_2733852	006510553	S	642	CCGAGAAGGGATGTGCCGGCAGACCTTTACAGGACACGAGTCTGACATCA	4	+	154927568-154927617	4qE2	Mus musculus guanine nucleotide binding protein (G protein), beta 1 (Gnb1), mRNA.	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IPI]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IDA]; The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm [goid 7603] [evidence ISA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	MGC98074; C77571; Gnb-1; AA409223	MGC98074; C77571; Gnb-1; AA409223
Mus musculus	RefSeq	ILMN_210657	ILMN_210657	TKT	NM_009388.2	NM_009388.2		21881	31543868	NM_009388.2	Tkt	NP_033414.1	ILMN_2780322	007150184	S	2916	GCTAAGCACACCCCTACAGAGGAATCTGAGGAAGGAGACTAGGGATGGTG	14	+	29403440-29403489	14qB	Mus musculus transketolase (Tkt), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [evidence IDA]	p68	p68
Mus musculus	RefSeq	ILMN_210657	ILMN_210657	TKT	NM_009388.2	NM_009388.2		21881	31543868	NM_009388.2	Tkt	NP_033414.1	ILMN_2780323	004850762	S	2764	GGCAAGCCATCTCCCTGTCAGGACAATTGAGGAACTTCTCAGCCACGAGT	14	+	29403288-29403337	14qB	Mus musculus transketolase (Tkt), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [evidence IDA]	p68	p68
Mus musculus	RefSeq	ILMN_210657	ILMN_210657	TKT	NM_009388.2	NM_009388.2		21881	31543868	NM_009388.2	Tkt	NP_033414.1	ILMN_2607880	006660240	S	2037	AGGGAGGTTCTGGCAGAGGTGGCGAAGGTGTACTGAGTGGGGAGGTAAAT	14	+	29402561-29402610	14qB	Mus musculus transketolase (Tkt), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [evidence IDA]	p68	p68
Mus musculus	RefSeq	ILMN_209032	ILMN_209032	SLC25A29	NM_181328.2	NM_181328.2		214663	31341979	NM_181328.2	Slc25a29	NP_851845.1	ILMN_1225300	002650100	S	1571	CACTAAGTCCGTTGAGGATCACGCCAGTGTAGGGTCTGGGTGGGAGCAGA	12	-	109274028-109274077	12qF1	Mus musculus solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29 (Slc25a29), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of acyl carnitine into, out of, within or between cells. Acyl carnitine is the condensation product of a carboxylic acid and carnitine and is the transport form for a fatty acid crossing the mitochondrial membrane [goid 6844] [evidence IDA]	Enables the directed movement of acyl carnitine into, out of, within or between cells. Acyl carnitine is the condensation product of a carboxylic acid and carnitine and is the transport form for a fatty acid crossing the mitochondrial membrane [goid 15227] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C030003J19Rik; CACL; mCACL	C030003J19Rik; CACL; mCACL
Mus musculus	RefSeq	ILMN_221858	ILMN_221858	SLIT1	NM_015748.2	NM_015748.2		20562	141801919	NM_015748.2	Slit1	NP_056563.1	ILMN_1232213	005870020	S	5041	ATAATGTGCGGGTGGCACACTAGCCGGGCTGGGGCGGGCATCACCAGGAT	19	-	41674894-41674940:41674941-41674943	19qC3	Mus musculus slit homolog 1 (Drosophila) (Slit1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The directed movement of the nucleus to a specific location within a cell [goid 40023] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	Slil1; mKIAA0813	Slil1; mKIAA0813
Mus musculus	RefSeq	ILMN_200116	ILMN_200116	LOC384220	XM_357498.1	XM_357498.1			38080478	XM_357498.1	LOC384220		ILMN_2537652	002940471	S	420	GCTGGCATCAGGGACACCTAACTTGGTCATTCCTATTTGTAGCCTAGTCC										
Mus musculus	RefSeq	ILMN_226457	ILMN_226457	ZFP128	NM_153802.3	NM_153802.3		243833	57863764	NM_153802.3	Zfp128	NP_722497.1	ILMN_2828139	006620379	S	3487	AGCTGCAACCACACTGACCCACGGGGACAAAGCCTTTTGCATAATCACAC	7	+	13478454-13478503	7qA1	Mus musculus zinc finger protein 128 (Zfp128), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Znf8; 9630016P15Rik; mZnf8; MGC113768	Znf8; 9630016P15Rik; mZnf8; MGC113768
Mus musculus	RefSeq	ILMN_218948	ILMN_218948	CH25H	NM_009890.1	NM_009890.1		12642	6857768	NM_009890.1	Ch25h	NP_034020.1	ILMN_2702303	001510349	S	1153	GTATGAAATCGCACTGGAACTGGGCTCTAACCTCACATGTTGAGAGAAGA	19	-	34548423-34548472	19qC1	Mus musculus cholesterol 25-hydroxylase (Ch25h), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: cholesterol + AH2 + O2 = 25-hydroxycholesterol + A + H2O [goid 1567] [evidence IEA]; Catalysis of the formation of a hydroxyl group on a steroid by incorporation of oxygen from O2 [goid 8395] [evidence IDA]	m25OH; AI462618	m25OH; AI462618
Mus musculus	MEEBO	ILMN_218414	ILMN_218414	MAST3	scl0234385.1_330	NM_199308.1			40556287	NM_199308.1	Mast3		ILMN_2695539	001990014	S	2965	GCATGAGTAGCCCTCTACCCATCTTGGAGCTGGCATCAAATAAAGTCCCA							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214078	ILMN_214078	CHL1	scl0001198.1_53	NM_007697.1			6680935	NM_007697.1	Chl1		ILMN_2644008	002680605	S	3409	GTGCCGGGAGCGGAACATATTGTTCACCTAATGACTAAGAATTGGGGTGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory [goid 50890] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_255585	ILMN_255585	OLFR318	NM_146501.1	NM_146501.1		258494	33238885	NM_146501.1	Olfr318	NP_666712.1	ILMN_2956535	001030333	S	867	CTACAGCCTGAGGAACAAGGAGGTCATGGGGGCACTGAGGAGACAAAGGG	11	-	58533632-58533681	11qB1.3	Mus musculus olfactory receptor 318 (Olfr318), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR285-1; RP23-128D9.10	MOR285-1; RP23-128D9.10
Mus musculus	Riken	ILMN_205346	ILMN_205346	NP220	ri|A730049C22|PX00151M09|AK043029|3302					AK043029	Np220		ILMN_1216145	002510653	S	2618	GCAAAAGAAAACATCATTCTGGGCTGGGAGTGTATTCGGGGTAGAGCACA										
Mus musculus	RefSeq	ILMN_186760	ILMN_229976	CEP110	XM_981952.1	XM_981952.1		26920	94368144	XM_981952.1	Cep110	XP_987046.1	ILMN_2438280	003140019	S	7288	GGATCTTGATTGACATTCCATTAGGATGTCAGTGAGGTAGGAGAGTAGCT					PREDICTED: Mus musculus centrosomal protein 110 (Cep110), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_221502	ILMN_229976	CEP110	XM_981952.1	XM_981952.1		26920	94368144	XM_981952.1	Cep110	XP_987046.1	ILMN_1258507	000010086	S	1661	GAGTGGTAGACTACAACATCTAAACAGATTACGCCAGGAAGCTCTGGACC					PREDICTED: Mus musculus centrosomal protein 110 (Cep110), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_220333	ILMN_229976	CEP110	XM_981952.1	XM_981952.1		26920	94368144	XM_981952.1	Cep110	XP_987046.1	ILMN_1251440	004850647	S	4176	AAATCAAAACAGCGGGAAGAGCGGCGGCAGAAAGCATCCACGCAGCATTC					PREDICTED: Mus musculus centrosomal protein 110 (Cep110), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_196416	ILMN_229976	CEP110	XM_981952.1	XM_981952.1		26920	94368144	XM_981952.1	Cep110	XP_987046.1	ILMN_1251303	001580138	S	6956	GATCAAAGGAAAGCAGCAGACAGAGGGCACCCTACACAGTCTGAGGAGAC					PREDICTED: Mus musculus centrosomal protein 110 (Cep110), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_214356	ILMN_214356	PET112L	NM_144896.4	NM_144896.4		229487	146149293	NM_144896.4	Pet112l	NP_659145.1	ILMN_1257501	003890634	S	1928	GGCCCCATGATGGTGGCAGCAGTGACTAAAGAAATTGTAAGTCTACACAG				3qF1	Mus musculus PET112-like (yeast) (Pet112l), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]	9430026F02Rik; MGC11629	9430026F02Rik; MGC11629
Mus musculus	RefSeq	ILMN_214356	ILMN_214356	PET112L	NM_144896.4	NM_144896.4		229487	146149293	NM_144896.4	Pet112l	NP_659145.1	ILMN_2647156	001580333	S	1508	AAGAGGCCCTGGAAAAGCTCTGCCAGACCACCATAGATGGACACCCCCAA				3qF1	Mus musculus PET112-like (yeast) (Pet112l), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]	9430026F02Rik; MGC11629	9430026F02Rik; MGC11629
Mus musculus	RefSeq	ILMN_214356	ILMN_214356	PET112L	NM_144896.4	NM_144896.4		229487	146149293	NM_144896.4	Pet112l	NP_659145.1	ILMN_2755915	006400500	S	1353	CACACCCTCTGCACTTGCTGAGCTCCTCAACCTGCTGGACAGGAAAGCAA				3qF1	Mus musculus PET112-like (yeast) (Pet112l), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]	9430026F02Rik; MGC11629	9430026F02Rik; MGC11629
Mus musculus	RefSeq	ILMN_196745	ILMN_310308	LOC100040413	XR_031764.1	XR_031764.1		100040413	149233631	XR_031764.1	LOC100040413		ILMN_1245504	006580554	S	1132	CATCTTCAGTTGTCTCTGATGCAGCTTATACGAAGATAATTGTTGTTCTG	1	-	19142986-19143035	1qA3	PREDICTED: Mus musculus similar to high-mobility group box 1 (LOC100040413), misc RNA.					
Mus musculus	RefSeq	ILMN_219192	ILMN_219192	JAGN1	NM_026365.2	NM_026365.2		67767	142350585	NM_026365.2	Jagn1	NP_080641.1	ILMN_1221859	001940523	S	939	CCCTCCTTCCATTCGTCACCTCTTCACCACCAGTACTAGAAGAAATATGG	6	+	113398027-113398076	6qE3	Mus musculus jagunal homolog 1 (Drosophila) (Jagn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			AW146438; 5830427H10Rik	AW146438; 5830427H10Rik
Mus musculus	RefSeq	ILMN_221728	ILMN_231663	ZFP91-CNTF	NM_001039718.1	NM_001039718.1		664779	90669975	NM_001039718.1	Zfp91-cntf	NP_001034807.1	ILMN_2757889	005890326	S	2118	GAAGGACAGTGTAGTGGCACACAAAGCAAAAAGCCACCCTGAGGTGCTGA	19	-	12844869-12844918		Mus musculus zinc finger protein 91, ciliary neurotrophic factor transcription unit (Zfp91-cntf), mRNA.				Pzf; 9130014I08Rik; AW545902; A530054C17Rik; AL024263	Pzf; 9130014I08Rik; AW545902; A530054C17Rik; AL024263
Mus musculus	RefSeq	ILMN_221728	ILMN_231663	ZFP91-CNTF	NM_001039718.1	NM_001039718.1		664779	90669975	NM_001039718.1	Zfp91-cntf	NP_001034807.1	ILMN_2739562	000150626	S	3077	GACCACAGGCATATTTCGTCAAGTAGGGTTGACCCACGTATGAACAGAAG	19	-	12838240-12838289		Mus musculus zinc finger protein 91, ciliary neurotrophic factor transcription unit (Zfp91-cntf), mRNA.				Pzf; 9130014I08Rik; AW545902; A530054C17Rik; AL024263	Pzf; 9130014I08Rik; AW545902; A530054C17Rik; AL024263
Mus musculus	RefSeq	ILMN_219468	ILMN_219468	CXCL3	NM_203320.2	NM_203320.2		330122	142368523	NM_203320.2	Cxcl3	NP_976065.1	ILMN_2709267	005340048	S	786	AAGATTATCAGTTGTTATTTATTGAAATGGTCTTACGGTGTCACATGAAA	5	+	91216889-91216938	5qE1	Mus musculus chemokine (C-X-C motif) ligand 3 (Cxcl3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Gm1960; Dcip1	Gm1960; Dcip1
Mus musculus	RefSeq	ILMN_260471	ILMN_260471	OLFR239	NM_207175.1	NM_207175.1		100038860	46395482	NM_207175.1	Olfr239	NP_997058.1	ILMN_3009589	003990184	S	361	GACCGCTACGTGGCCATCTGTCACCCACTGAGATACAATGTGCTCATGAG	17	+	660-709	17qB1	Mus musculus olfactory receptor 239 (Olfr239), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-10	MOR267-10
Mus musculus	RefSeq	ILMN_216661	ILMN_216661	TRUB1	NM_029839.2	NM_029839.2		72133	142353903	NM_029839.2	Trub1	NP_084115.1	ILMN_2701415	002100463	S	1359	TTCATTGGGAATAAGAGGCTATAAAAGCAGACTGATTTCTGTTGGCCGGC	19	+	57560487-57560536	19qD2	Mus musculus TruB pseudouridine (psi) synthase homolog 1 (E. coli) (Trub1), transcript variant 2, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine in a tRNA molecule [goid 31119] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]	2610009I02Rik; 9030425C13Rik; C76870; MGC107612; BB118943; AI448235	2610009I02Rik; 9030425C13Rik; C76870; MGC107612; BB118943; AI448235
Mus musculus	RefSeq	ILMN_216661	ILMN_216661	TRUB1	NM_029839.2	NM_029839.2		72133	142353903	NM_029839.2	Trub1	NP_084115.1	ILMN_2673768	001740154	S	298	GCAAAAGCAGACATTGAAAGTCGGACACGGAGGGACGCTGGACAGTGCAG	19	+	57532614-57532663	19qD2	Mus musculus TruB pseudouridine (psi) synthase homolog 1 (E. coli) (Trub1), transcript variant 2, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine in a tRNA molecule [goid 31119] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]	2610009I02Rik; 9030425C13Rik; C76870; MGC107612; BB118943; AI448235	2610009I02Rik; 9030425C13Rik; C76870; MGC107612; BB118943; AI448235
Mus musculus	Riken	ILMN_205504	ILMN_205504	D130047A11RIK	ri|D130047A11|PX00184C10|AK051413|1452					AK051413	D130047A11Rik		ILMN_1234572	006270204	S	1252	GCATGGTGTGGGCCTGTCGGAGACTTTTTCCAGTGCTAGATAGAACAGAG										
Mus musculus	MEEBO	ILMN_186968	ILMN_186968	PCM1	scl33866.37_94				13540493	NM_023662	Pcm1		ILMN_2440033	002100605	S	15	CATGCAACCGTGTAACGTGATTTTTCTAGTAAGTATCGCTCAGAAGGAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]				
Mus musculus	MEEBO	ILMN_186352	ILMN_186352	SCL0002720.1_68	scl0002720.1_68	AK053156.1			26343260	AK053156.1	scl0002720.1_68		ILMN_2434811	006180053	S	10	CCACCGTGGGGCCGCTGGTCGTCTACTTGGCAGTGCACAGGCTGATCATC										
Mus musculus	RefSeq	ILMN_207457	ILMN_207457	EGFL7	NM_178444.3	NM_178444.3		353156	38570122	NM_178444.3	Egfl7	NP_848538.2	ILMN_2631417	001580048	S	77	AAGTTCAGTGGTGAGGGGTCCAAGGAGAGTCCGGGGAGACCAGGGAGGCT	2	+	26436679-26436728	2qA3	Mus musculus EGF-like domain 7 (Egfl7), transcript variant a, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [pmid 15085134] [evidence IEP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [pmid 15162510] [evidence IEP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	VE-statin; Zneu1	VE-statin; Zneu1
Mus musculus	RefSeq	ILMN_199757	ILMN_199757	LOC382964	XM_356777.1	XM_356777.1			38076889	XM_356777.1	LOC382964		ILMN_1249621	003440370	S	296	CTGGGGCTCTGGGACCTTTGATGGGGTCTGAGGATTTGTGTGAAGCACAG										
Mus musculus	RefSeq	ILMN_213440	ILMN_213440	ASB4	NM_023048.5	NM_023048.5		65255	119637818	NM_023048.5	Asb4	NP_075535.1	ILMN_2637073	000540129	S	3185	GGAATATGTAGCCACTTGTTTTGAATTGCTTGCACATGTGTTTAATGTGA	6	+	5382921-5382970	6qA1	Mus musculus ankyrin repeat and SOCS box-containing 4 (Asb4), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		AW060255; AV117194; 8430401O13Rik	AW060255; AV117194; 8430401O13Rik
Mus musculus	RefSeq	ILMN_191915	ILMN_191915	UCKL1	NM_026765.3	NM_026765.3		68556	118129860	NM_026765.3	Uckl1	NP_081041.2	ILMN_2483348	006110167	S	1720	CACATTAACTTATTTTGAGTTTAAAAATGTTACCGAAATAAAAATAATCA	2	-	181303898-181303947	2qH4	Mus musculus uridine-cytidine kinase 1-like 1 (Uckl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]	Urkl1; 1110007H10Rik	Urkl1; 1110007H10Rik
Mus musculus	RefSeq	ILMN_211251	ILMN_211251	D10ERTD610E	NM_028027.2	NM_028027.2		52666	142362982	NM_028027.2	D10Ertd610e	NP_082303.1	ILMN_1259949	000290348	S	2056	GACACAGGATCCGTCAGTTCCACTCCCTGCATGCACCACGACCCACTCAA	10	-	126619697-126619746	10qD3	Mus musculus DNA segment, Chr 10, ERATO Doi 610, expressed (D10Ertd610e), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	GEFT; 2410008H17Rik	GEFT; 2410008H17Rik
Mus musculus	RefSeq	ILMN_211251	ILMN_211251	D10ERTD610E	NM_028027.2	NM_028027.2		52666	142362982	NM_028027.2	D10Ertd610e	NP_082303.1	ILMN_1250057	004760739	S	279	TATTGCCGTCAGTGAGGGGAGCATGTCAGCGTCTGCTGTCTCGGGGCTGG	10	-	126624318-126624367	10qD3	Mus musculus DNA segment, Chr 10, ERATO Doi 610, expressed (D10Ertd610e), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	GEFT; 2410008H17Rik	GEFT; 2410008H17Rik
Mus musculus	RefSeq	ILMN_211251	ILMN_211251	D10ERTD610E	NM_028027.2	NM_028027.2		52666	142362982	NM_028027.2	D10Ertd610e	NP_082303.1	ILMN_1242749	007550048	S	929	GCCAGAATAAACCCAAGTCAGAGCATGTGCTGTCAGAGTTTGGGGACAGC	10	-	126622147-126622196	10qD3	Mus musculus DNA segment, Chr 10, ERATO Doi 610, expressed (D10Ertd610e), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	GEFT; 2410008H17Rik	GEFT; 2410008H17Rik
Mus musculus	RefSeq	ILMN_216456	ILMN_242726	FAM184A	NM_001081428.1	NM_001081428.1		75906	124487474	NM_001081428.1	Fam184a	NP_001074897.1	ILMN_2671276	005910474	S	1079	CAAGGAGGGAGAAATGGCCTTGTTAAGCAAGCACAAGGAAGTGGAGAGCG	10	-	53416989-53417038	10qB3	Mus musculus family with sequence similarity 184, member A (Fam184a), mRNA.				4930438C08Rik; 3110012E06Rik	4930438C08Rik; 3110012E06Rik
Mus musculus	RefSeq	ILMN_216456	ILMN_242726	FAM184A	NM_001081428.1	NM_001081428.1		75906	124487474	NM_001081428.1	Fam184a	NP_001074897.1	ILMN_1242166	006960463	S	3241	TGGAATCCAGTGGCATGGGCAATGGACATCCTACCCGCCTGGAACCCATT	10	-	53355126-53355175	10qB3	Mus musculus family with sequence similarity 184, member A (Fam184a), mRNA.				4930438C08Rik; 3110012E06Rik	4930438C08Rik; 3110012E06Rik
Mus musculus	RefSeq	ILMN_202158	ILMN_242726	FAM184A	NM_001081428.1	NM_001081428.1		75906	124487474	NM_001081428.1	Fam184a	NP_001074897.1	ILMN_1232026	004830524	S	3472	CTGGCACAGCTCTGTGTGGACTGTTCCAAGAGCATGACTGCATAGGAATC	10	-	53353379-53353428	10qB3	Mus musculus family with sequence similarity 184, member A (Fam184a), mRNA.				4930438C08Rik; 3110012E06Rik	4930438C08Rik; 3110012E06Rik
Mus musculus	RefSeq	ILMN_213940	ILMN_213940	OLFR822	NM_146671.1	NM_146671.1		258666	33239335	NM_146671.1	Olfr822	NP_666882.1	ILMN_1246505	004390059	S	560	GCACTGACACACAGCTCATAGAGACAATTGCATTCATCTCAGCTTTGGTG	10	+	129512027-129512076	10qD3	Mus musculus olfactory receptor 822 (Olfr822), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR113-2	MOR113-2
Mus musculus	RefSeq	ILMN_216302	ILMN_216302	CUTA	NM_026307.2	NM_026307.2		67675	21702736	NM_026307.2	Cuta	NP_080583.3	ILMN_3041584	002900593	I	11	TACTGCAGCGCGGGCTGCATGAACTGGGGGCGGGCGCCCGGCGTCTTGCT	17	-	27076271-27076303:27076304-27076313:27076396-27076402	17qA3.3	Mus musculus cutA divalent cation tolerance homolog (E. coli) (Cuta), transcript variant 1, mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus [goid 10038] [evidence IEA]		AI326454; 2700094G22Rik; 0610039D01Rik; 1810022E02Rik; 1810060C03Rik	AI326454; 2700094G22Rik; 0610039D01Rik; 1810022E02Rik; 1810060C03Rik
Mus musculus	RefSeq	ILMN_216302	ILMN_216302	CUTA	NM_026307.2	NM_026307.2		67675	21702736	NM_026307.2	Cuta	NP_080583.3	ILMN_2669540	004540632	S	568	CCTGTTCCTGTTTTAATGCCCCCTGGCTTCCATGTGATGACCGAACCCCC	17	-	27074939-27074988	17qA3.3	Mus musculus cutA divalent cation tolerance homolog (E. coli) (Cuta), transcript variant 1, mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus [goid 10038] [evidence IEA]		AI326454; 2700094G22Rik; 0610039D01Rik; 1810022E02Rik; 1810060C03Rik	AI326454; 2700094G22Rik; 0610039D01Rik; 1810022E02Rik; 1810060C03Rik
Mus musculus	RefSeq	ILMN_216302	ILMN_216302	CUTA	NM_026307.2	NM_026307.2		67675	21702736	NM_026307.2	Cuta	NP_080583.3	ILMN_3116330	006980370	A	442	GCACCCTTATGAAGTGGCCGAAGTGATTGCACTGCCTGTGGAGCAGGGAA	17	-	27075065-27075114	17qA3.3	Mus musculus cutA divalent cation tolerance homolog (E. coli) (Cuta), transcript variant 1, mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus [goid 10038] [evidence IEA]		AI326454; 2700094G22Rik; 0610039D01Rik; 1810022E02Rik; 1810060C03Rik	AI326454; 2700094G22Rik; 0610039D01Rik; 1810022E02Rik; 1810060C03Rik
Mus musculus	Riken	ILMN_205968	ILMN_205968	D130063P19RIK	ri|D130063P19|PX00185A06|AK051672|2167					AK051672	D130063P19Rik		ILMN_1238936	001990754	S	2032	GGTGGCATGGATCCTATTACAAATGGTTGCGAGTCACCATGTGGTTGCTG										
Mus musculus	MEEBO	ILMN_222414	ILMN_222414	STK24	scl0223255.1_245	NM_145465.1			21703921	NM_145465.1	Stk24		ILMN_2749235	007160129	S	1795	CGGGAGACAGAGAGTCGCTCTGGTGGATCAGTGTACAGATTGTATATAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223846	ILMN_241157	SFXN4	NM_053198.2	NM_053198.2		94281	61098134	NM_053198.2	Sfxn4	NP_444428.2	ILMN_1248840	007650243	S	1004	ACAGAGGGGTATAGGAACAAGTTTATCTCCTGTTTGGAAATCTTTGGCCC	19	-	60914839-60914875:60914876-60914888	19qD3	Mus musculus sideroflexin 4 (Sfxn4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	MGC107253	MGC107253
Mus musculus	RefSeq	ILMN_223846	ILMN_241157	SFXN4	NM_053198.2	NM_053198.2		94281	61098134	NM_053198.2	Sfxn4	NP_444428.2	ILMN_2776377	000510093	S	1178	CAGCCCGGGGAAGGATAATGTGACCCTGTGAATAAACCTGTCTGGAGTTG	19	-	60914665-60914714	19qD3	Mus musculus sideroflexin 4 (Sfxn4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	MGC107253	MGC107253
Mus musculus	Riken	ILMN_207059	ILMN_207059	NEK2	ri|5730484K07|PX00644D23|AK077627|2046					AK077627	Nek2		ILMN_1243210	000940332	S	1710	AGTCGGTGCTCCAGACAGAGCTCCGCCATGTCTTACGGAAGTTAAATGGC						A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212463	ILMN_212463	PDCL	NM_026176.2	NM_026176.2		67466	24475676	NM_026176.2	Pdcl	NP_080452.1	ILMN_2997256	000020722	S	1563	CAAGACTAAAGGTTGCAGATGGTGCCTGGTGCTGTAGTTAGCAGTGGCCT	2	-	37206739-37206788	2qB	Mus musculus phosducin-like (Pdcl), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]		AW108059; 1200011E13Rik	AW108059; 1200011E13Rik
Mus musculus	RefSeq	ILMN_238852	ILMN_238852	BRSK2	NM_029426.2	NM_029426.2		75770	118130600	NM_029426.2	Brsk2	NP_083702.1	ILMN_3048950	005130347	I	3840	CAGCAAAGCCACGCAGTACAAGTGGGAAGGGGCATATCTACGGTGTCAGG	7	+	149189942-149189991	7qF5	Mus musculus BR serine/threonine kinase 2 (Brsk2), transcript variant 1, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; The specification and formation of anisotropic intracellular organization or cell growth patterns [goid 30010] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IC ]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IC ]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	SAD-A; SADA; 4833424K13Rik	SAD-A; SADA; 4833424K13Rik
Mus musculus	MEEBO	ILMN_223725	ILMN_223725	OLFR1501	scl0258626.1_23	NM_146633.1			33239095	NM_146633.1	Olfr1501		ILMN_2768174	000520520	S	579	CGCGAACAGGTCATCTTCCTTTTTGCTTTTTTGGTCATCACAACTAGTGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_215846	ILMN_215846	ARAF	NM_009703.1	NM_009703.1		11836	27545180	NM_009703.1	Araf	NP_033833.1	ILMN_1237241	000610437	S	1541	CCTACAGCTTCCAGTCGGATGTCTATGCCTATGGTGTTGTGCTCTATGAG	X	+	20435913-20435962	XqA1.3	Mus musculus v-raf murine sarcoma 3611 viral oncogene homolog (Araf), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA];  [goid 5057] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Araf1; AW495444; 1200013E08Rik; A-Raf	Araf1; AW495444; 1200013E08Rik; A-Raf
Mus musculus	RefSeq	ILMN_215846	ILMN_215846	ARAF	NM_009703.1	NM_009703.1		11836	27545180	NM_009703.1	Araf	NP_033833.1	ILMN_2914271	006020474	S	2118	TGGAGAGCTGTTTTATCTCCAATGGCTGTGACTCAGTGCAAGGATTCCAC	X	+	20437460-20437509	XqA1.3	Mus musculus v-raf murine sarcoma 3611 viral oncogene homolog (Araf), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA];  [goid 5057] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Araf1; AW495444; 1200013E08Rik; A-Raf	Araf1; AW495444; 1200013E08Rik; A-Raf
Mus musculus	RefSeq	ILMN_196773	ILMN_196773	KLRA1	NM_016659.3	NM_016659.3		16627	133922591	NM_016659.3	Klra1	NP_057868.2	ILMN_1228875	000870537	S	488	CCTCCACCAGAACCACTTCTTGCTAGCGACACAGAAACCACTCGAGGCAC	6	-	130330719-130330735:130332422-130332454	6qF3	Mus musculus killer cell lectin-like receptor, subfamily A, member 1 (Klra1), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]	A1; Ly49v; Ly49a; Ly49o<129>; Klra22	A1; Ly49v; Ly49a; Ly49o<129>; Klra22
Mus musculus	RefSeq	ILMN_256351	ILMN_256351	BC087945	NM_001013792.1	NM_001013792.1		432940	62177165	NM_001013792.1	BC087945	NP_001013814.1	ILMN_3160842	005720128	S	908	AGCCAAGCCTTCACTCCTTGTTCTGTTATGCAGTGTGTTCCACTGGGGGC	15	-	27535808-27535857	15qB1	Mus musculus cDNA sequence BC087945 (BC087945), mRNA.				C79097	C79097
Mus musculus	RefSeq	ILMN_207501	ILMN_249602	STFA2	NM_001082545.1	NM_001082545.1		20862	127139251	NM_001082545.1	Stfa2	NP_001076014.1	ILMN_1260585	005050047	I	330	GACCTACTTCTAAACAGCAGATTCCAACTTGACCTGATCCCCTAACCCCC	16	-	36404075-36404112:36404113-36404124	16qB3	Mus musculus stefin A2 (Stfa2), mRNA. XM_148531 XM_915403	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	Stf2	Stf2
Mus musculus	RefSeq	ILMN_221527	ILMN_249602	STFA2	NM_001082545.1	NM_001082545.1		20862	127139251	NM_001082545.1	Stfa2	NP_001076014.1	ILMN_2736774	003170274	S	207	CTTCATTAAGATGAATGTAGGACGTGGTTGCTACCTCCACATAAACGTCT	16	-	36404198-36404238:36405216-36405224	16qB3	Mus musculus stefin A2 (Stfa2), mRNA. XM_148531 XM_915403	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	Stf2	Stf2
Mus musculus	RefSeq	ILMN_199412	ILMN_199412	OLFR1158	NM_146645.2	NM_146645.2		258639	147906577	NM_146645.2	Olfr1158	NP_666856.2	ILMN_1254931	001500220	S	575	ACACACATGACATTATACTGGTGTTTTTCACAAGTTTGGTGGAAGCTGTC				2qD	Mus musculus olfactory receptor 1158 (Olfr1158), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR173-3	MOR173-3
Mus musculus	RefSeq	ILMN_199657	ILMN_199657	LOC383792	XM_357255.1	XM_357255.1			38075681	XM_357255.1	LOC383792		ILMN_1226790	005690703	S	77	GTAGACAGGAGGAGGGGCAAGAGAAAGCAGAGACAAGATGGCGGCAGTGC										
Mus musculus	RefSeq	ILMN_250623	ILMN_250623	GNL2	NM_145552.1	NM_145552.1		230737	21704087	NM_145552.1	Gnl2	NP_663527.1	ILMN_2798753	004890138	S	1839	AGACACTCAGGAGGAACCAGTGGGAAACGACACCAAGGCCGTGCTCAGAG	4	+	124729977-124730026	4qD2.2	Mus musculus guanine nucleotide binding protein-like 2 (nucleolar) (Gnl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Ngp-1; MGC7863; BC003262; HUMAUANTIG	Ngp-1; MGC7863; BC003262; HUMAUANTIG
Mus musculus	RefSeq	ILMN_213696	ILMN_213696	FGF17	NM_008004.4	NM_008004.4		14171	145966703	NM_008004.4	Fgf17	NP_032030.1	ILMN_2639788	003780743	S	1120	TCGCAGGACCAAGCGCACTCGGAGGCCCCAGTCCCAAACGTAGTCAGGGA				14qD2	Mus musculus fibroblast growth factor 17 (Fgf17), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	Riken	ILMN_206723	ILMN_206723	C230066H01RIK	ri|C230066H01|PX00175F09|AK082583|798					AK082583	C230066H01Rik		ILMN_1260291	000070131	S	746	GTGCTGATGTGTCACTAGTTTCTCTGTTAAGCCTGAGAGTCAATGGCCAC										
Mus musculus	RefSeq	ILMN_200150	ILMN_200150	LOC385799	XM_358950.1	XM_358950.1			38080702	XM_358950.1	LOC385799		ILMN_2537761	006550520	S	168	AAAACATTACCACAGCTGCAGCAGCTGCCTGAGCCCCAGCGGCTGTGTGA										
Mus musculus	RefSeq	ILMN_220541	ILMN_220541	ADCY9	NM_009624.2	NM_009624.2		11515	150378486	NM_009624.2	Adcy9	NP_033754.2	ILMN_2723474	003310017	S	4065	CAGTGAACTCAGCAAGCTCAATGTCTCAAAGAGTGTGTGAGGCAGCGCCG				16qA1	Mus musculus adenylate cyclase 9 (Adcy9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS];  [goid 16849] [evidence IEA]	mKIAA0520	mKIAA0520
Mus musculus	RefSeq	ILMN_197335	ILMN_197335	LOC381398	XM_355356.1	XM_355356.1			38075191	XM_355356.1	LOC381398		ILMN_2527769	001030735	S	154	GCGGTGCCCTCTTCATCGGGTACTGTATCTACTTCGACCGCAAAAGGCGG										
Mus musculus	RefSeq	ILMN_216967	ILMN_216967	D630003M21RIK	NM_177657.2	NM_177657.2		228846	31343529	NM_177657.2	D630003M21Rik	NP_808325.1	ILMN_2963009	007320132	S	3764	GAGCCCATGCCACCTCATCAAACATGGCCATGGTGCAATGTTAGGACCGC	2	-	157887288-157887337	2qH1	Mus musculus RIKEN cDNA D630003M21 gene (D630003M21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215470	ILMN_217969	PCDHA7	NM_009957.1	NM_009957.1		12939	23956045	NM_009957.1	Pcdha7	NP_034087.1	ILMN_1215440	005890019	S	2593	CAGTCCGGTCCCGGTGAGTTGCCAGACAAATTCATTATCCCAGGATCTCC	18	+	37344689-37344738	18qB2-qB3	Mus musculus protocadherin alpha 7 (Pcdha7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC90581; Crnr4; Cnr4	MGC90581; Crnr4; Cnr4
Mus musculus	RefSeq	ILMN_209756	ILMN_217969	PCDHA7	NM_009957.1	NM_009957.1		12939	23956045	NM_009957.1	Pcdha7	NP_034087.1	ILMN_1250379	003120639	S	4970	GCCCCACTGAAGCCCATGTAACTGACCTTACGTGCCTTTTGAACTAGGAG	18	+	37347066-37347115	18qB2-qB3	Mus musculus protocadherin alpha 7 (Pcdha7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC90581; Crnr4; Cnr4	MGC90581; Crnr4; Cnr4
Mus musculus	RefSeq	ILMN_217969	ILMN_217969	PCDHA7	NM_009957.1	NM_009957.1		12939	23956045	NM_009957.1	Pcdha7	NP_034087.1	ILMN_2689952	001340609	S	2036	CATCTAAGGTGTCAGCTGGAGCCTCCAGAGTGGATCAGAGGCTGGTGGAT	18	+	37135613-37135662	18qB2-qB3	Mus musculus protocadherin alpha 7 (Pcdha7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC90581; Crnr4; Cnr4	MGC90581; Crnr4; Cnr4
Mus musculus	RefSeq	ILMN_208968	ILMN_217969	PCDHA7	NM_009957.1	NM_009957.1		12939	23956045	NM_009957.1	Pcdha7	NP_034087.1	ILMN_2677651	003120220	S	4642	GCAGACTGCTTTGAAATGCTATCCGGAATATCAGCTTGTAGAAAGTAATA	18	+	37346738-37346787	18qB2-qB3	Mus musculus protocadherin alpha 7 (Pcdha7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC90581; Crnr4; Cnr4	MGC90581; Crnr4; Cnr4
Mus musculus	Riken	ILMN_204635	ILMN_204635	P4HA2	ri|E130103J11|PX00091N17|AK053504|3060					AK053504	P4ha2		ILMN_1255122	003520253	S	2858	AGACTCTCTGGATTGGAACCCTACCACTGGGGAAGCCACTGGGTGTTGTC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The posttranslational modification of peptidyl-proline to form 4-hydroxy-L-proline; catalyzed by procollagen-proline,2-oxoglutarate-4-dioxygenase [goid 18401] [evidence IDA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2 [goid 4656] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211590	ILMN_313768	LOC100045484	XM_001474380.1	XM_001474380.1		100045484	149269942	XM_001474380.1	LOC100045484	XP_001474430.1	ILMN_1213311	001510044	S	1264	TCTGGCTCAGGCTGCTCCTCCTTAGGACTTTGTGGGTCCAGTTTTGCCTT					PREDICTED: Mus musculus similar to GFRalpha-3 (LOC100045484), mRNA.					
Mus musculus	RefSeq	ILMN_199394	ILMN_199394	OLFR1272	NM_146980.1	NM_146980.1		258982	22128968	NM_146980.1	Olfr1272	NP_667191.1	ILMN_2767246	005390059	S	693	ACGCAAGGCCCTCTCCACATGTGCCTCTCACATCACAGTGGTCATCCTGT	2	-	90121988-90122037	2qE1	Mus musculus olfactory receptor 1272 (Olfr1272), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR227-3	MOR227-3
Mus musculus	Riken	ILMN_206510	ILMN_206510	D630045A11RIK	ri|D630045A11|PX00198E14|AK085593|2958					AK085593	D630045A11Rik		ILMN_2580636	005900180	S	2387	GGCGAGGAGGATTCCCAAAGCCTCTGCAGTGCTTCCTTTATTGTGGCCGT										
Mus musculus	RefSeq	ILMN_222730	ILMN_222730	OLFR1365	NM_207572.1	NM_207572.1		404335	46849788	NM_207572.1	Olfr1365	NP_997455.1	ILMN_2964155	007000377	S	715	AAGATCAAGTCAGCACAGGGAAGGCGGAAGGCCTTTGGAACCTGTGGCTC	13	-	21647125-21647174	13qA3.1	Mus musculus olfactory receptor 1365 (Olfr1365), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-63	MOR256-63
Mus musculus	Riken	ILMN_203042	ILMN_203042	AP1G1	ri|9930111I12|PX00062D21|AK037086|2357					AK037086	Ap1g1		ILMN_2554288	005290747	S	2286	CAGGCAGTGCACATACATGGTGAGCAGACATATTTTCAGACAAGGCACTC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes [goid 30136] [evidence ISO]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_196988	ILMN_247104	EG627607	XM_892281.3	XM_892281.3		627607	149263350	XM_892281.3	EG627607	XP_897374.2	ILMN_2526503	003130327	S	1426	GGGATTGCAGGGTCTCTCCACCAAGAAAAGCATCTCCCTGGGGACCAACC	12	+	88099495-88099544	12qD2	PREDICTED: Mus musculus predicted gene, EG627607 (EG627607), mRNA.					
Mus musculus	RefSeq	ILMN_197511	ILMN_197511	LOC380913	XM_358460.1	XM_358460.1			38076366	XM_358460.1	LOC380913		ILMN_2528390	005080390	S	503	TGGTGCAGTCACAATGCGTTTGCTCAGCCAGAACATCTCCAGGGTGTGGC										
Mus musculus	RefSeq	ILMN_187143	ILMN_187143	RSPH1	NM_025290.3	NM_025290.3		22092	118130375	NM_025290.3	Rsph1	NP_079566.1	ILMN_2441534	004760066	S	1041	GCGTGCCTTAGTTAACACCAGTCAGCTAGGGCTGGTATCCACCACCTGTC	17	-	31392037-31392086	17qA3.3	Mus musculus radial spoke head 1 homolog (Chlamydomonas) (Rsph1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]		Tsga2	Tsga2
Mus musculus	RefSeq	ILMN_220799	ILMN_315821	TTBK1	XM_001476670.1	XM_001476670.1		106763	149269323	XM_001476670.1	Ttbk1	XP_001476720.1	ILMN_2776095	002690653	S	6851	CGGGTCTCAGAAGGGAAGTAGCCATCACACCATTAAAAAGCCTGTGGACC				17qC	PREDICTED: Mus musculus tau tubulin kinase 1 (Ttbk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198175	ILMN_315821	TTBK1	XM_001476670.1	XM_001476670.1		106763	149269323	XM_001476670.1	Ttbk1	XP_001476720.1	ILMN_1219159	001070379	S	4080	CCCCAAGAAAGGACCCAAGGGGAAACAACTGCAGACTCAGCGCGCAGCAA				17qC	PREDICTED: Mus musculus tau tubulin kinase 1 (Ttbk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184995	ILMN_184995	USP4	NM_011678.1	NM_011678.1		22258	6755942	NM_011678.1	Usp4	NP_035808.1	ILMN_2824683	004540010	S	3339	GCCACAGTAAACCAAGCCTCCAGCAAATTTGATGTTGTCCTCTAGTTCTT	9	+	108276586-108276634:108276555-108276555	9qF2	Mus musculus ubiquitin specific peptidase 4 (proto-oncogene) (Usp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	F730026I20Rik; mKIAA4155; Unp; KIAA4155	F730026I20Rik; mKIAA4155; Unp; KIAA4155
Mus musculus	RefSeq	ILMN_184995	ILMN_184995	USP4	NM_011678.1	NM_011678.1		22258	6755942	NM_011678.1	Usp4	NP_035808.1	ILMN_1237017	001070687	S	3008	CTTGAAGACTGCTCATATCAATCTCAAACCAGATGAGGACATTACCTCCT	9	+	108275001-108275050	9qF2	Mus musculus ubiquitin specific peptidase 4 (proto-oncogene) (Usp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	F730026I20Rik; mKIAA4155; Unp; KIAA4155	F730026I20Rik; mKIAA4155; Unp; KIAA4155
Mus musculus	RefSeq	ILMN_253838	ILMN_253838	OLFR1116	NM_001011734.1	NM_001011734.1		257875	58801261	NM_001011734.1	Olfr1116	NP_001011734.1	ILMN_2944188	001110091	S	657	ATCTTCAGCCAAAGGGATGGCCAAGGCTTTTTCCACCTGCTCGTCTCACC					Mus musculus olfactory receptor 1116 (Olfr1116), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR264-21P	MOR264-21P
Mus musculus	MEEBO	ILMN_188458	ILMN_188458	1110003O08RIK	scl34240.1.561_330						1110003O08Rik		ILMN_2452855	001570554	S	13	TGTGTCACTCGCCTAGGATGTGTGGTTCTCCTTTCGGTTCTCAGTAAACC										
Mus musculus	Riken	ILMN_203825	ILMN_203825	A230083G16RIK	ri|A230083G16|PX00129B16|AK038996|992					AK038996	A230083G16Rik		ILMN_1227267	002690646	S	728	ATCATGGATGCCTGCTGAGGTCCCACCCACCAACCACATAGCTGGAAGCC										
Mus musculus	RefSeq	ILMN_220827	ILMN_233706	RIBC2	XM_911372.2	XM_911372.2		67747	94399197	XM_911372.2	Ribc2	XP_916465.1	ILMN_1253464	006450324	S	1370	CGCTTATTTCAAAGTGAATCTGCTCCTTGGTCTGAACACCCCGTATGGGC				15qE2	PREDICTED: Mus musculus RIB43A domain with coiled-coils 2, transcript variant 3 (Ribc2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_190526	ILMN_256383	TMEM102	NM_001033433.3	NM_001033433.3		380705	145966765	NM_001033433.3	Tmem102	NP_001028605.2	ILMN_1245382	006580056	S	1782	GGGGCGCTGCCTCATTATTTTTTGAGCGGCCGAAAGCTCCGTGTGGGAGA				11qB3	Mus musculus transmembrane protein 102 (Tmem102), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4632403M07Rik	4632403M07Rik
Mus musculus	RefSeq	ILMN_215567	ILMN_215567	LPAR2	NM_020028.3	NM_020028.3		53978	103472009	NM_020028.3	Lpar2	NP_064412.2	ILMN_2661082	005900487	S	5456	CCCTCCAGGCTGGATATGGTCATTGCCATGTTGAATCAAGAACTGCGTTC	8	+	72354756-72354805	8qB3.3	Mus musculus lysophosphatidic acid receptor 2 (Lpar2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of Rho protein signal transduction [goid 35025] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IDA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IPI]	LPA2; IPA2	LPA2; IPA2
Mus musculus	RefSeq	ILMN_215567	ILMN_215567	LPAR2	NM_020028.3	NM_020028.3		53978	103472009	NM_020028.3	Lpar2	NP_064412.2	ILMN_2773817	000780044	S	2431	CCTTGGACTTTCTACTTCTGAGTCCCCCAAGACCTCAGATATGCCAGGCC	8	+	72351731-72351780	8qB3.3	Mus musculus lysophosphatidic acid receptor 2 (Lpar2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of Rho protein signal transduction [goid 35025] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IDA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IPI]	LPA2; IPA2	LPA2; IPA2
Mus musculus	RefSeq	ILMN_215259	ILMN_215259	SLC26A5	NM_030727.4	NM_030727.4		80979	118130720	NM_030727.4	Slc26a5	NP_109652.3	ILMN_1246639	005860292	S	2565	GCTAGCAGTTACGGCTCGATTTGGAGGGTGAACGAGGCATAGCACGATGC	5	-	21316820-21316869	5qA3	Mus musculus solute carrier family 26, member 5 (Slc26a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	Pres; MGC124328; MGC124329; prestin	Pres; MGC124328; MGC124329; prestin
Mus musculus	RefSeq	ILMN_215259	ILMN_215259	SLC26A5	NM_030727.4	NM_030727.4		80979	118130720	NM_030727.4	Slc26a5	NP_109652.3	ILMN_2730454	001070025	S	2570	CAGTTACGGCTCGATTTGGAGGGTGAACGAGGCATAGCACGATGCACTGC	5	-	21316815-21316864	5qA3	Mus musculus solute carrier family 26, member 5 (Slc26a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	Pres; MGC124328; MGC124329; prestin	Pres; MGC124328; MGC124329; prestin
Mus musculus	RefSeq	ILMN_213179	ILMN_213179	ARRDC1	NM_178408.2	NM_178408.2		215705	31341544	NM_178408.2	Arrdc1	NP_848495.1	ILMN_1255050	001340048	S	1152	CACTGTCCCCTACTTTGCAGAAGGCTCTGCGGGCCCAGTACCCACCACCA	2	-	24781323-24781372	2qA3	Mus musculus arrestin domain containing 1 (Arrdc1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC004091; AI957342; MGC28029	BC004091; AI957342; MGC28029
Mus musculus	RefSeq	ILMN_228670	ILMN_228670	PDZD8	NM_001033222.1	NM_001033222.1		107368	75677507	NM_001033222.1	Pdzd8	NP_001028394.1	ILMN_2982143	000010240	S	4645	TACTACATCATCTGGTTTCTTGTGGCCTTAAAGGACTGTCGGTCATTCTG	19	-	59351715-59351764	19qD3	Mus musculus PDZ domain containing 8 (Pdzd8), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW228944; Pdzk8; A630041P07Rik; AV329468	AW228944; Pdzk8; A630041P07Rik; AV329468
Mus musculus	RefSeq	ILMN_221101	ILMN_221101	PRKAG2	NM_145401.1	NM_145401.1		108099	21703801	NM_145401.1	Prkag2	NP_663376.1	ILMN_3161626	001190519	S	2773	CGTTTATGAAAACAGGCTGTGGTCGCAGGGAAGAAGTAACGGAAGACGTC	5	-	24368858-24368907	5qA3	Mus musculus protein kinase, AMP-activated, gamma 2 non-catalytic subunit (Prkag2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of AMP [goid 4679] [evidence TAS]	AAKG2; AI854673; 2410051C13Rik; WPWS; AAKG; H91620p	AAKG2; AI854673; 2410051C13Rik; WPWS; AAKG; H91620p
Mus musculus	RefSeq	ILMN_185958	ILMN_185958	UGT1A2	NM_013701.1	NM_013701.1		22236	32526870	NM_013701.1	Ugt1a2	NP_038729.1	ILMN_1214888	001740148	S	7	TACTCGACTACCCCAGGCCCATCATGCCTAACATGGTCTTCATTGGGGGC	1	+	90031788-90031807:90031808-90031837	1qD	Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A2 (Ugt1a2), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191457	ILMN_256238	LIMK2	NM_173053.1	NM_173053.1		16886	76443700	NM_173053.1	Limk2	NP_774958.1	ILMN_2479227	004230102	S	307	CAGCCAGCCTGAGGCGCTCCCAGACGGGTTTGCAGCTGAGCCTGTTTATC	11	-	3271039-3271088	11qA1	Mus musculus LIM motif-containing protein kinase 2 (Limk2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Limk2b; C85310; A930024P04Rik; 9430059K01; Limk2a	Limk2b; C85310; A930024P04Rik; 9430059K01; Limk2a
Mus musculus	RefSeq	ILMN_219123	ILMN_219123	MMP3	NM_010809.1	NM_010809.1		17392	6754713	NM_010809.1	Mmp3	NP_034939.1	ILMN_2704576	005270670	S	805	GTCCTCCACAGACTTGTCCCGTTTCCATCTCTCTCAAGATGATGTAGATG	9	+	7449846-7449895	9qA1	Mus musculus matrix metallopeptidase 3 (Mmp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	STR-1; SLN1; SLN-1; Stmy1; Str1	STR-1; SLN1; SLN-1; Stmy1; Str1
Mus musculus	RefSeq	ILMN_219123	ILMN_219123	MMP3	NM_010809.1	NM_010809.1		17392	6754713	NM_010809.1	Mmp3	NP_034939.1	ILMN_2753809	006180544	S	1186	GCTAGCAGGTTATCCTAAAAGCATTCACACCCTGGGTCTCCCTGCAACCG	9	+	7451773-7451822	9qA1	Mus musculus matrix metallopeptidase 3 (Mmp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	STR-1; SLN1; SLN-1; Stmy1; Str1	STR-1; SLN1; SLN-1; Stmy1; Str1
Mus musculus	RefSeq	ILMN_219123	ILMN_219123	MMP3	NM_010809.1	NM_010809.1		17392	6754713	NM_010809.1	Mmp3	NP_034939.1	ILMN_2899041	001510750	S	1573	GAGTCTTTGTGAAAGGAAGTGCTTTGTTCAGCATGTGCTATGGCAGAACC	9	+	7455747-7455796	9qA1	Mus musculus matrix metallopeptidase 3 (Mmp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	STR-1; SLN1; SLN-1; Stmy1; Str1	STR-1; SLN1; SLN-1; Stmy1; Str1
Mus musculus	RefSeq	ILMN_193802	ILMN_247524	4930447J18RIK	XM_898953.2	XM_898953.2		73961	94397050	XM_898953.2	4930447J18Rik	XP_904046.1	ILMN_1229496	000730309	S	227	GGACCATGTGAAGTATGGAGGGAACAGGTTCTGATGATGAAACCTGGGAG	14	+	48518756-48518805	14qC1	PREDICTED: Mus musculus RIKEN cDNA 4930447J18 gene (4930447J18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212501	ILMN_212501	TANK	NM_011529.1	NM_011529.1		21353	6755717	NM_011529.1	Tank	NP_035659.1	ILMN_1220799	004390474	S	1366	GAGGGGATTTCCTCCGGCATCTTAATACACACTTTAATGGGGAGACTTAA	2	+	61491576-61491612:61491613-61491625	2qC1.3	Mus musculus TRAF family member-associated Nf-kappa B activator (Tank), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	I-TRAF; E430026L09Rik; C86182	I-TRAF; E430026L09Rik; C86182
Mus musculus	RefSeq	ILMN_212501	ILMN_212501	TANK	NM_011529.1	NM_011529.1		21353	6755717	NM_011529.1	Tank	NP_035659.1	ILMN_2734028	005960243	S	214	CCTTCCGACAGGCATGCATGGATAGAGATTCAGCAGTAAGAGAGCTACAG	2	+	61451813-61451855:61464960-61464966	2qC1.3	Mus musculus TRAF family member-associated Nf-kappa B activator (Tank), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	I-TRAF; E430026L09Rik; C86182	I-TRAF; E430026L09Rik; C86182
Mus musculus	RefSeq	ILMN_212501	ILMN_212501	TANK	NM_011529.1	NM_011529.1		21353	6755717	NM_011529.1	Tank	NP_035659.1	ILMN_2660438	007000209	S	1332	TGTCAAGAGCTTTTCCCACCATCCATTACATCCAGAGGGGATTTCCTCCG	2	+	61491542-61491591	2qC1.3	Mus musculus TRAF family member-associated Nf-kappa B activator (Tank), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	I-TRAF; E430026L09Rik; C86182	I-TRAF; E430026L09Rik; C86182
Mus musculus	RefSeq	ILMN_196536	ILMN_248674	2510012J08RIK	NM_027381.1	NM_027381.1		70312	121583672	NM_027381.1	2510012J08Rik	NP_081657.1	ILMN_1255323	005910463	S	2149	CTTGTGCAGACAACCGGGACTTTGCCATTCTGCGCTTCCATGCGGGACCG	10	+	80788515-80788564	10qC1	Mus musculus RIKEN cDNA 2510012J08 gene (2510012J08Rik), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_248674	ILMN_248674	2510012J08RIK	NM_027381.1	NM_027381.1		70312	121583672	NM_027381.1	2510012J08Rik	NP_081657.1	ILMN_2974280	002810767	S	2532	GGGGTGGCAGAAAGGTCTTGTTTCCATGGACTTGTTCAACCGGGGAACCC	10	+	80788898-80788947	10qC1	Mus musculus RIKEN cDNA 2510012J08 gene (2510012J08Rik), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_220597	ILMN_220597	TTC24	NM_172526.1	NM_172526.1		214191	27369735	NM_172526.1	Ttc24	NP_766114.1	ILMN_2931973	006770026	S	2124	CCTCACAGGAGTGCGGGAGGAAAAGAGATGGCTGGGCACAGTGACACGGG	3	-	88155414-88155463	3qF1	Mus musculus tetratricopeptide repeat domain 24 (Ttc24), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC58815; A430025D11Rik	MGC58815; A430025D11Rik
Mus musculus	RefSeq	ILMN_220597	ILMN_220597	TTC24	NM_172526.1	NM_172526.1		214191	27369735	NM_172526.1	Ttc24	NP_766114.1	ILMN_2724211	003310398	S	1689	TGTATGGGCTTTGGGGAGGAGCCTCTTTAGCCGGTATGGACAAGGTGCTC	3	-	88155849-88155898	3qF1	Mus musculus tetratricopeptide repeat domain 24 (Ttc24), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC58815; A430025D11Rik	MGC58815; A430025D11Rik
Mus musculus	RefSeq	ILMN_199247	ILMN_323473	LOC637365	XR_033126.1	XR_033126.1		637365	149274156	XR_033126.1	LOC637365		ILMN_1242826	005130086	S	2511	CGGAACACAGACCTTAAAGTTCACTACCGAATCCATACAAGAGTGAAACC					PREDICTED: Mus musculus similar to krueppel-like zinc finger protein HZF2 (LOC637365), misc RNA.					
Mus musculus	MEEBO	ILMN_220745	ILMN_220745	8430422M09RIK	scl49085.7.1_79	XM_148115.3			38079792	XM_148115.3	8430422M09Rik		ILMN_2726228	004280538	S	1450	CCGAGGGTTAGGGCTGCTACAGTGCACAGAGGTTACCACCCACTTTGTGA										
Mus musculus	RefSeq	ILMN_212613	ILMN_212613	SPOCK3	NM_023689.2	NM_023689.2		72902	31982622	NM_023689.2	Spock3	NP_076178.1	ILMN_2991930	002100521	S	2569	GTGTAGACATTTTGACATACCACCACCTTTGGGTATATCACACCACTAGT	8	+	65835353-65835402	8qB3.1	Mus musculus sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3 (Spock3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IEA]	2900045C01Rik; AI428471; mKIAA4039; KIAA4039	2900045C01Rik; AI428471; mKIAA4039; KIAA4039
Mus musculus	RefSeq	ILMN_210795	ILMN_231088	1600002K03RIK	NM_027207.2	NM_027207.2		69770	142367692	NM_027207.2	1600002K03Rik	NP_081483.1	ILMN_2609264	003800095	S	277	GGAGGAGCATGAAGAGATGGCCTCTCAGGACAGCGAGGAAGAGACTGTCT	10	+	79636999-79637048	10qC1	Mus musculus RIKEN cDNA 1600002K03 gene (1600002K03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210594	ILMN_210594	2310076L09RIK	NM_025874.3	NM_025874.3		66968	116292165	NM_025874.3	2310076L09Rik	NP_080150.2	ILMN_3158565	002230400	A	1804	TGGAGGAAGACCTGGTGCCCACATCATCTACCTGGGGGCTCAGAACTCCT	17	-	56251108-56251157	17qD	Mus musculus RIKEN cDNA 2310076L09 gene (2310076L09Rik), transcript variant 1, mRNA.	Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]			MLDP; PAT-1; Lsdp5; AW109675; AI415325	MLDP; PAT-1; Lsdp5; AW109675; AI415325
Mus musculus	RefSeq	ILMN_196146	ILMN_196146	ZFP523	NM_172617.2	NM_172617.2		224656	142372958	NM_172617.2	Zfp523	NP_766205.1	ILMN_1236258	006510427	S	2046	ACCAGCTCCCACACCACACTGGAGAAGGCTCCATGCTCACAGGCAGCCCT	17	+	28334379-28334386:28334473-28334514	17qA3.3	Mus musculus zinc finger protein 523 (Zfp523), mRNA.				2810027J07; MGC66570; MGC79196; BC025615	2810027J07; MGC66570; MGC79196; BC025615
Mus musculus	RefSeq	ILMN_259133	ILMN_259133	FHAD1	NM_028429.1	NM_028429.1		329977	50355932	NM_028429.1	Fhad1	NP_082705.1	ILMN_3000155	006420682	S	590	CAGACCTGAGAGGGGAACTAAGCGAGAAGCAGAAGATGGAGCTGGAGCGG	4	-	141472429-141472467:141474189-141474199	4qE1	Mus musculus forkhead-associated (FHA) phosphopeptide binding domain 1 (Fhad1), mRNA.				B230311F11; 2900090M10Rik	B230311F11; 2900090M10Rik
Mus musculus	RefSeq	ILMN_191368	ILMN_244090	UGT1A1	NM_201645.2	NM_201645.2		394436	145699098	NM_201645.2	Ugt1a1	NP_964007.2	ILMN_1228948	003450632	S	830	GTGAAAGATTACCCCAGGCCCATCATGCCCAACATGGTTTTTATTGGTGG				1qD	Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A1 (Ugt1a1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence ISA]	Gnt1; UgtBr1; Udpgt-1a; UGT1A01	Gnt1; UgtBr1; Udpgt-1a; UGT1A01
Mus musculus	MEEBO	ILMN_191492	ILMN_191492	4122402O22RIK	scl49373.21_184				27229250	NM_029945	4122402O22Rik		ILMN_1219853	002230113	S	2	CCAGAGTTTAATGTTTTAGACTGACTTATTGGAGTGTGGGGGATGCAGTG										
Mus musculus	RefSeq	ILMN_219083	ILMN_219083	METTL3	NM_019721.2	NM_019721.2		56335	77627972	NM_019721.2	Mettl3	NP_062695.2	ILMN_1243558	001110092	S	1903	GCGTTCAGAGCCATGGGCTACAGGCCACACCTTAAGAGGACTGTTTACGC	14	-	52914584-52914633	14qC2	Mus musculus methyltransferase-like 3 (Mettl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically [goid 16556] [evidence ISO]; Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor [goid 1510] [evidence ISO]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + m(7)G(5')pppAm = S-adenosyl-L-homocysteine + m(7)G(5')pppm(6)Am [goid 16422] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + RRACH = S-adenosyl-L-homocysteine + RRm6ACH; R = purine, and H = C, A, or U [goid 1734] [evidence ISO]	Spo8; 2310024F18Rik; M6A	Spo8; 2310024F18Rik; M6A
Mus musculus	MEEBO	ILMN_185865	ILMN_185865	XAB2	scl35156.16_334				13385659	NM_026156	Xab2		ILMN_2430673	005910719	S	15	GGGTGAACCGTTTGCGATCCGAGTTGTACTTATAGATGCCTTCGACCATG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212120	ILMN_212120	SAMD11	NM_173736.2	NM_173736.2		231004	31343462	NM_173736.2	Samd11	NP_776097.1	ILMN_1216690	000150164	S	1962	GCTTCTCCAATGATCCGGCAGGCAACCGTCATACTCCGTGATTCCCAGTC					Mus musculus sterile alpha motif domain containing 11 (Samd11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with a PH domain (pleckstrin homology) of a protein, a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signaling or as constituents of the cytoskeleton [goid 42731] [evidence IDA]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IDA]; Interacting selectively with a SAM (Sterile Alpha Motif) domain, which is a 70-amino acid protein sequence that participates in protein-protein, protein-lipid, and protein-RNA interactions and is conserved from lower to higher eukaryotes [goid 32093] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	mr-s; MGC38976; BC026991	mr-s; MGC38976; BC026991
Mus musculus	RefSeq	ILMN_218454	ILMN_218454	NPR2	NM_173788.3	NM_173788.3		230103	118129825	NM_173788.3	Npr2	NP_776149.1	ILMN_2696026	001580129	S	3585	CTCTTCCTGCCTCCTGTAAATATCTGTATCTAGACCAGAATATTTTGTCC	4	+	43664041-43664090	4qB1	Mus musculus natriuretic peptide receptor 2 (Npr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 16941] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	cn; GC-B2; GC-B3; GC-B; mNPR-B	cn; GC-B2; GC-B3; GC-B; mNPR-B
Mus musculus	RefSeq	ILMN_227471	ILMN_227471	OLFR213	NM_001011801.1	NM_001011801.1		258020	58801367	NM_001011801.1	Olfr213	NP_001011801.1	ILMN_3162242	006770270	S	300	TGTGGCTTGCTTCACACAGGCTCTTGTGGTTTTTGTCCTGGGGGCAACTG	6	+	116490772-116490821	6qE3	Mus musculus olfactory receptor 213 (Olfr213), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR119-3	MOR119-3
Mus musculus	RefSeq	ILMN_198323	ILMN_198323	LOC381168	XM_355090.1	XM_355090.1			38083854	XM_355090.1	LOC381168		ILMN_1225152	001340017	S	645	GGACGGTGGTAAGTAGCTCTCGGGCTAAACTGTCATGTGTGTGTCCTGGG										
Mus musculus	RefSeq	ILMN_223988	ILMN_311583	LOC666036	XR_030810.1	XR_030810.1		666036	149258942	XR_030810.1	LOC666036		ILMN_2772691	000990746	S	1450	TGCTCAACGGAGCTGTCATCAGACCAGAGGTGCCACTACGCAGAGGCCAA	8	-	78235704-78235753	8qC1	PREDICTED: Mus musculus similar to 3-phosphoglycerate dehydrogenase (LOC666036), misc RNA.					
Mus musculus	MEEBO	ILMN_223815	ILMN_223815	2810046L04RIK	scl23200.12_402				27734197	NM_173382	2810046L04Rik		ILMN_2769811	002450273	S	3973	GGGATGTCTTTCCACTCACACACTCATCTGAAGTGAATGTGCGGCAGCAA										
Mus musculus	RefSeq	ILMN_219949	ILMN_219949	OLFR1449	NM_146303.1	NM_146303.1		258300	22129680	NM_146303.1	Olfr1449	NP_666415.1	ILMN_1223962	005690400	S	552	CCTGGCTCTTTCTTGCTCTGATATCTATGTGAATGAGATTGTGCTCTTTA	19	+	13009781-13009830	19qA	Mus musculus olfactory receptor 1449 (Olfr1449), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR202-34	MOR202-34
Mus musculus	MEEBO	ILMN_215614	ILMN_215614	RHOF	scl26066.7.1_28	NM_175092.2			31341251	NM_175092.2	Rhof		ILMN_2661615	007100156	S	3872	GAGGTTGGGGACCCCATAGGGATCTGCCCACAGATACAACCATCCTGCCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189061	ILMN_189061	ZFP398	NM_027477.1	NM_027477.1		272347	27819591	NM_027477.1	Zfp398	NP_081753.1	ILMN_2472364	001440292	S	1	GTTCAAAGAACCTGGAAGCTGCTGCTTATCTTGTAAAAAGTCACTTGTCA	6	+	47765283-47765332	6qB2.3	Mus musculus zinc finger protein 398 (Zfp398), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	5730513I23Rik; 6430539K21	5730513I23Rik; 6430539K21
Mus musculus	RefSeq	ILMN_256959	ILMN_256959	ITLNB	NM_001007552.1	NM_001007552.1		493583	56090543	NM_001007552.1	Itlnb	NP_001007553.1	ILMN_2818484	004120431	S	793	CAATAATGAGAGAGCAGCCAGTGCCTTGTGTGCTGGCGTGAGGGTCACTG	1	-	173365812-173365861		Mus musculus intelectin b (Itlnb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode [goid 9624] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	Itln2	Itln2
Mus musculus	MEEBO	ILMN_187790	ILMN_187790	TRIM42	scl35478.5.1_140	NM_030219.1			28195391	NM_030219.1	Trim42		ILMN_2447121	002710669	S	19	CACATTCCTCGAGGAGGTTGTAGGGTAGATGGATGTTTCCAGTACCTCTG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_206554	ILMN_206554	E030010H17RIK	ri|E030010H17|PX00204N23|AK086906|1396					AK086906	E030010H17Rik		ILMN_1242200	004730750	S	1201	GTTCCAGGTGTTACGGACTGCGTCTTAATTTTTTTTGGGGGGGGCTGGGC										
Mus musculus	RefSeq	ILMN_211937	ILMN_211937	DDB1	NM_015735.1	NM_015735.1		13194	7657010	NM_015735.1	Ddb1	NP_056550.1	ILMN_2620930	004250376	S	3881	GTAGGTTGTGGGTGTGGGGAGGTTGAGGTAGAGGGAAGAGGGTCGAGAGG	19	+	10704029-10704078	19qA	Mus musculus damage specific DNA binding protein 1 (Ddb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	127kDa; p127-Ddb1; AA408517	127kDa; p127-Ddb1; AA408517
Mus musculus	MEEBO	ILMN_192853	ILMN_192853	SCL0002022.1_2978	scl0002022.1_2978	AK086018.1			26351912	AK086018.1	scl0002022.1_2978		ILMN_2491930	000020438	S	2	GCCCTTTCTCCACACAGGTGCAGGGTAGACAAATAGCAAATTCTATACTC										
Mus musculus	MEEBO	ILMN_217125	ILMN_217125	D430034N21	scl47337.1.1_173	NM_183211.1			34147285	NM_183211.1	D430034N21		ILMN_2679359	001440768	S	3205	AGAATAATTTAAAACTATGACTTAAAATCAAGAAATTTGTCTTTTTAAAG										
Mus musculus	RefSeq	ILMN_223673	ILMN_223673	DMGDH	NM_028772.3	NM_028772.3		74129	146141123	NM_028772.3	Dmgdh	NP_083048.1	ILMN_1247352	002450750	S	2647	CTCCTGCCAGGATAAAGGTAGCCAAGACTTCACTTCAAAAAATCATCAAA				13qC3	Mus musculus dimethylglycine dehydrogenase precursor (Dmgdh), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid [goid 6546] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein [goid 4047] [evidence IEA]; Catalysis of the reaction: N,N-dimethylglycine + acceptor + H2O = sarcosine + formaldehyde + reduced acceptor [goid 47865] [evidence IEA]	MGC107623; AI787269; 1200014D15Rik	MGC107623; AI787269; 1200014D15Rik
Mus musculus	Riken	ILMN_204965	ILMN_204965	5330421K23RIK	ri|5330421K23|PX00054E05|AK030497|3397					AK030497	5330421K23Rik		ILMN_1214775	007200196	S	3278	GAGTGAACGTGACTGGGGAGGGGCAGTAAAAGAGTGAAAGGGTGTCTGGG										
Mus musculus	RefSeq	ILMN_235588	ILMN_235588	CNOT4	NM_016877.2	NM_016877.2		53621	31560445	NM_016877.2	Cnot4	NP_058573.2	ILMN_2828302	003780301	S	2998	GATAGCCTTAGATGATCAGAGATCAGTGAGTGGGGTACTTCATAAGGCAG	6	-	34975396-34975445	6qB1	Mus musculus CCR4-NOT transcription complex, subunit 4 (Cnot4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Not4hp; Not4h; Not4	Not4hp; Not4h; Not4
Mus musculus	RefSeq	ILMN_220974	ILMN_236066	FXYD1	NM_194321.1	NM_194321.1		56188	37577136	NM_194321.1	Fxyd1	NP_919302.1	ILMN_2729342	003520601	S	118	GCAGAGGACATTTCTTGACCCTGGCTGACTCCCTAGGGCAATGGCATCTC	7	-	31839375-31839385:31839386-31839424	7qB1	Mus musculus FXYD domain-containing ion transport regulator 1 (Fxyd1), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]	0610012C17Rik; PML; PLM; 1110006M24Rik	0610012C17Rik; PML; PLM; 1110006M24Rik
Mus musculus	Riken	ILMN_206307	ILMN_206307	D030069C22RIK	ri|D030069C22|PX00181L08|AK083708|2605					AK083708	D030069C22Rik		ILMN_1223666	006290020	S	2519	CTGTCTGGTTTCTCATACACCTCAAGAGCATCTGCCCAGGGAGTGGTACC										
Mus musculus	RefSeq	ILMN_211904	ILMN_238013	IFT57	NM_028680.3	NM_028680.3		73916	142373257	NM_028680.3	Ift57	NP_082956.2	ILMN_2665841	000360259	S	2201	GATGCACACCTATGATGTAGCTCTCCAGGTGAAGCAGGGGACTGAAGTTC	16	+	49764900-49764949	16qB5	Mus musculus intraflagellar transport 57 homolog (Chlamydomonas) (Ift57), mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	4833420A15Rik; MHS4R2; Esrrbl1; Hippi	4833420A15Rik; MHS4R2; Esrrbl1; Hippi
Mus musculus	RefSeq	ILMN_211904	ILMN_238013	IFT57	NM_028680.3	NM_028680.3		73916	142373257	NM_028680.3	Ift57	NP_082956.2	ILMN_2646089	000540440	S	1442	GGTATTTTTGCACATGTGTTAATATCATGGTGATTATGATGGCCAAAGCC	16	+	49764141-49764190	16qB5	Mus musculus intraflagellar transport 57 homolog (Chlamydomonas) (Ift57), mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	4833420A15Rik; MHS4R2; Esrrbl1; Hippi	4833420A15Rik; MHS4R2; Esrrbl1; Hippi
Mus musculus	RefSeq	ILMN_222076	ILMN_222076	IL17A	NM_010552.3	NM_010552.3		16171	142367609	NM_010552.3	Il17a	NP_034682.1	ILMN_1220595	000020347	S	1020	GGTTCTCTCCTCTGAATGGGGTGAAAACCAAACTTAGTTTTATGTTTAAT	1	+	20724426-20724475	1qA4	Mus musculus interleukin 17A (Il17a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	Il17; Ctla8; Ctla-8	Il17; Ctla8; Ctla-8
Mus musculus	RefSeq	ILMN_197596	ILMN_197596	LOC193533	XM_110067.2	XM_110067.2			38076739	XM_110067.2	LOC193533		ILMN_1229008	007160050	S	238	GGTTTGCTGGCAGATGCTCGTTCACTTGCAGACATAGCAAGAGAAGCATC										
Mus musculus	RefSeq	ILMN_190030	ILMN_258785	2210038L17RIK	NM_001033529.1	NM_001033529.1		78646	85702046	NM_001033529.1	2210038L17Rik	NP_001028701.1	ILMN_2466574	001740195	S	1732	GGGGTTGGTTGTTACACATGTAGAGATTTCTAACTTGGGAAAACACCTAA	17	+	6123450-6123482:6123483-6123499	17qA1	Mus musculus RIKEN cDNA 2210038L17 gene (2210038L17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_258785	ILMN_258785	2210038L17RIK	NM_001033529.1	NM_001033529.1		78646	85702046	NM_001033529.1	2210038L17Rik	NP_001028701.1	ILMN_2809656	000380019	S	2337	ACAGGCTGCACAGGGAGGCAGGAGAGATGCACAGGGGGACGTAAGATCAA	17	+	6124055-6124104	17qA1	Mus musculus RIKEN cDNA 2210038L17 gene (2210038L17Rik), mRNA.					
Mus musculus	MEEBO	ILMN_195274	ILMN_195274	9626096_327_RC	9626096_327_rc						9626096_327_rc		ILMN_1242972	006020082	S	1	CGGGAAGCAGAAGCGCGCGAACAGAAGCGAGAAGCAGGCTGATTGGTTAA										
Mus musculus	RefSeq	ILMN_191336	ILMN_233021	SIPA1L1	NM_172579.1	NM_172579.1		217692	27369827	NM_172579.1	Sipa1l1	NP_766167.1	ILMN_2763679	006760661	S	5872	CGTCCCAGCCTGTTCATATCGGACAGTGCACAGCACAATTGCAGATCAAC	12	+	83551153-83551202	12qD1	Mus musculus signal-induced proliferation-associated 1 like 1 (Sipa1l1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW213287; 4931426N11Rik; mKIAA0440	AW213287; 4931426N11Rik; mKIAA0440
Mus musculus	Riken	ILMN_207311	ILMN_207311	LRP8	ri|4921506C07|PX00638H12|AK076555|2626					AK076555	Lrp8		ILMN_1258808	002190504	S	2327	GCTTGCTCTCAGCTTCCCAACTGAATGAAAACCCAGCAGCCAACCCGCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex [goid 21819] [evidence IGI]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IGI]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_217558	ILMN_217558	OTUD5	NM_138604.2	NM_138604.2		54644	31560767	NM_138604.2	Otud5	NP_613070.2	ILMN_2684759	005550553	S	2364	AAACTTGTCATCCCTTCCCAGCAATGATGACAGGAAAATGGAAGTGGCAA	X	+	7451857-7451906	XqA1.1	Mus musculus OTU domain containing 5 (Otud5), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AA407879; Sfc7; AI553596; DXImx46e; FLJ12550	AA407879; Sfc7; AI553596; DXImx46e; FLJ12550
Mus musculus	RefSeq	ILMN_218155	ILMN_218155	SCRN2	NM_146027.1	NM_146027.1		217140	22122498	NM_146027.1	Scrn2	NP_666139.1	ILMN_2692341	005270148	S	1232	GAGCAGGAAGGCCTAGAGGCTCTCAGAGGGCTGCTTACGGGTGAACAGAC	11	+	96895030-96895079	11qD	Mus musculus secernin 2 (Scrn2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]	D11Moh48; AV001119; SES2; MGC29406	D11Moh48; AV001119; SES2; MGC29406
Mus musculus	RefSeq	ILMN_223575	ILMN_255961	KRT26	NM_001033397.2	NM_001033397.2		320864	142375557	NM_001033397.2	Krt26	NP_001028569.1	ILMN_2765981	006420070	S	2247	CCGTGTCACCATAAAGTTCCTATCTGTCTACCCAGCCCAGTGCTTTGGTG	11	-	99190103-99190152	11qD	Mus musculus keratin 26 (Krt26), mRNA. XM_903050 XM_903051	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt25b; 4732407F15Rik	Krt25b; 4732407F15Rik
Mus musculus	RefSeq	ILMN_210234	ILMN_210234	SLC39A7	NM_008202.2	NM_008202.2		14977	118150669	NM_008202.2	Slc39a7	NP_032228.2	ILMN_3032560	005290681	I	303	GGTGGACCGGCCTTGGGGACAATGTAAGAGCGGAGCAAGTAGTATAGAGG	17	-	34168467-34168516	17qB1	Mus musculus solute carrier family 39 (zinc transporter), member 7 (Slc39a7), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	AA408174; MGC143814; KE4; AI117660; Ke-4; H2-Ke4; Zip7; H-2Ke4; MGC143815; AL024048; Ring5	AA408174; MGC143814; KE4; AI117660; Ke-4; H2-Ke4; Zip7; H-2Ke4; MGC143815; AL024048; Ring5
Mus musculus	RefSeq	ILMN_210234	ILMN_210234	SLC39A7	NM_008202.2	NM_008202.2		14977	118150669	NM_008202.2	Slc39a7	NP_032228.2	ILMN_3106053	005290370	A	2199	GGCTTCAGGGAAGACCTGGCAGAAGGACTGGGGTAGACATCAATCGTGTG	17	-	34167315-34167364	17qB1	Mus musculus solute carrier family 39 (zinc transporter), member 7 (Slc39a7), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	AA408174; MGC143814; KE4; AI117660; Ke-4; H2-Ke4; Zip7; H-2Ke4; MGC143815; AL024048; Ring5	AA408174; MGC143814; KE4; AI117660; Ke-4; H2-Ke4; Zip7; H-2Ke4; MGC143815; AL024048; Ring5
Mus musculus	RefSeq	ILMN_239406	ILMN_239406	INADL	NM_001005787.1	NM_001005787.1		12695	55769575	NM_001005787.1	Inadl	NP_001005787.1	ILMN_3162917	006510377	I	2627	TCCCTTGTCTCTGAGATAGATGCCATGCAGAGACTGGAGAGGCAGCATAC	4	+	98355495-98355544	4qC6	Mus musculus InaD-like (Drosophila) (Inadl), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RP23-291M22.2; Cipp; Patj	RP23-291M22.2; Cipp; Patj
Mus musculus	RefSeq	ILMN_211452	ILMN_211452	PRL8A2	NM_010088.1	NM_010088.1		13529	6753689	NM_010088.1	Prl8a2	NP_034218.1	ILMN_1225722	004070292	S	714	CTTCATTAAATATCATCTCAGTGCATTGATGTGCCGCATAACTGGGCAAG	13	+	27445876-27445925	13qA3.1	Mus musculus prolactin family 8, subfamily a, member 2 (Prl8a2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	mdPRP; D/tPRP; DPRP; Dtprp	mdPRP; D/tPRP; DPRP; Dtprp
Mus musculus	RefSeq	ILMN_211181	ILMN_211181	ARNTL2	NM_172309.1	NM_172309.1		272322	26986632	NM_172309.1	Arntl2	NP_758513.1	ILMN_1259991	004490521	S	1507	GAGCCTTTTGCAGTGAGCCCTTCTGAAACAGAGGTCCTGGAGGCTGCCAG	6	+	146778227-146778276	6qG3	Mus musculus aryl hydrocarbon receptor nuclear translocator-like 2 (Arntl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence ISO]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]	CLIF; BMAL2; MOP9; 4632430A05Rik; MGC124257	CLIF; BMAL2; MOP9; 4632430A05Rik; MGC124257
Mus musculus	RefSeq	ILMN_221452	ILMN_221452	RNF20	NM_182999.1	NM_182999.1		109331	33859828	NM_182999.1	Rnf20	NP_892044.1	ILMN_1252308	000010435	S	3895	TTAAGAAGTAACAGGAATGCATTGATTGTGAAGAGATCTCGGTAGTCTGG	4	+	49669555-49669604	4qB1	Mus musculus ring finger protein 20 (Rnf20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW540162; 4833430L21Rik; C79397; mKIAA4116; KIAA4116	AW540162; 4833430L21Rik; C79397; mKIAA4116; KIAA4116
Mus musculus	RefSeq	ILMN_187456	ILMN_187456	TNFRSF1A	NM_011609.3	NM_011609.3		21937	144227249	NM_011609.3	Tnfrsf1a	NP_035739.2	ILMN_2469329	000610010	S	845	GAAGTTGTGCCTACCTCCTCCGCTTGCAAATGTCACAAACCCCCAGGACT	6	+	125310539-125310588	6qF3	Mus musculus tumor necrosis factor receptor superfamily, member 1a (Tnfrsf1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence TAS]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence IMP]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence IPI]	TNF-R1; TNFRp55; CD120a; p55-R; TNFR60; TNF-R55; TNFAR; TNFRI; TNF-R-I; Tnfr1; Tnfr-2; FPF; TNF-R; p55	TNF-R1; TNFRp55; CD120a; p55-R; TNFR60; TNF-R55; TNFAR; TNFRI; TNF-R-I; Tnfr1; Tnfr-2; FPF; TNF-R; p55
Mus musculus	Riken	ILMN_202589	ILMN_202589	USH2A	ri|A930011D15|PX00066K11|AK020845|1239					AK020845	Ush2a		ILMN_1225286	002760133	S	916	CATGGGCCTCTAACTCCAGATTCTGCCTCCGTTTACACAGAGCCCCCATC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; An actin-based, cross-linked cellular protrusion on the apical surface of auditory and vestibular hair cells. Stereocilium bundles act as mechanosensory organelles by responding to fluid motion or fluid pressure changes [goid 32421] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]	Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IDA]		
Mus musculus	RefSeq	ILMN_256159	ILMN_256159	OLFR283	NM_147036.1	NM_147036.1		259038	22128872	NM_147036.1	Olfr283	NP_667247.1	ILMN_2940545	002970446	S	732	GGCCGTCAGCTTCTTTTACGGCTCAGGGTTACTCCGCTACCTCATGCCAA	15	-	98208758-98208807	15qF1	Mus musculus olfactory receptor 283 (Olfr283), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR160-1	MOR160-1
Mus musculus	RefSeq	ILMN_200442	ILMN_200442	LOC384292	XM_357548.1	XM_357548.1			38081960	XM_357548.1	LOC384292		ILMN_1237395	005260037	S	264	GCCTCAATGTCAAGAACGGCCATCCCGGCTCCTTGATGAAATCAAGTCTC										
Mus musculus	MEEBO	ILMN_219812	ILMN_219812	PTGER3	scl22423.4.1_236	NM_011196.1			6755217	NM_011196.1	Ptger3		ILMN_2770866	007380528	S	1566	ACATGAGAGGGCAAGAGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of renal water excretion [goid 30146] [evidence IMP]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IDA]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a prostaglandin (PG) to initiate a change in cell activity [goid 4955] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IDA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IMP]		
Mus musculus	RefSeq	ILMN_243095	ILMN_243095	CCDC110	NM_001033246.1	NM_001033246.1		212392	85701743	NM_001033246.1	Ccdc110	NP_001028418.1	ILMN_2823947	006380402	S	2498	ATGCCTATGAAGATGCTTCCAGTCTTAGGAATCGGCCTGTGGCTTCTGAC	8	+	47442332-47442381	8qB1.1	Mus musculus coiled-coil domain containing 110 (Ccdc110), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Gm172	Gm172
Mus musculus	RefSeq	ILMN_221409	ILMN_221409	PCDHGB2	NM_033575.3	NM_033575.3		93700	142380298	NM_033575.3	Pcdhgb2	NP_291053.1	ILMN_2735175	006840349	S	2440	GGCGACGACTCTTGGGTACCAGGTACTCTTGGAGACACTGACGTTCCGTT	18	+	37851952-37852001	18qB3	Mus musculus protocadherin gamma subfamily B, 2 (Pcdhgb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_196914	ILMN_196914	LOC381266	XM_355209.1	XM_355209.1			38049548	XM_355209.1	LOC381266		ILMN_1258849	005390369	S	108	CAGCCTGAAGAACTACGACCCTCAGAAGCTTAACAAAAACAAGAAGTTGG										
Mus musculus	RefSeq	ILMN_220837	ILMN_318888	LOC100048413	XM_001480186.1	XM_001480186.1		100048413	149255777	XM_001480186.1	LOC100048413	XP_001480236.1	ILMN_2727536	003710424	S	919	GCGGCTGAGTAACCATCCTTGAAATGACTGTCCTTTCCAACCTCTATCCC					PREDICTED: Mus musculus similar to Myeloid leukemia factor 2 (LOC100048413), mRNA.					
Mus musculus	RefSeq	ILMN_199643	ILMN_199643	LOC383778	XM_357240.1	XM_357240.1			38075442	XM_357240.1	LOC383778		ILMN_2535965	003710541	S	1335	GACATCTGCAGGCTCTAGGGTGCAGTGTCAGCTGACATCTGTAGGCTCTG										
Mus musculus	Riken	ILMN_202621	ILMN_202621	MRVI1	ri|9530002K19|PX00110D14|AK020536|817					AK020536	Mrvi1		ILMN_1252727	000540746	S	173	GAGCCACAGGCAGCCCAGACCCAAGACCATTTCCCAGCCCTCCCACAATC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]				
Mus musculus	RefSeq	ILMN_196325	ILMN_245737	2310001H12RIK	XM_992259.1	XM_992259.1		69504	94375056	XM_992259.1	2310001H12Rik	XP_997353.1	ILMN_2687845	004010538	S	2024	CCTTGATGATAATAGACTGAACCTCTGAATCTGGACCCAATTAAATGTCC	5	+	110250652-110250701		PREDICTED: Mus musculus RIKEN cDNA 2310001H12 gene, transcript variant 3 (2310001H12Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193361	ILMN_244207	ZFP2	NM_001044698.1	NM_001044698.1		22678	113374177	NM_001044698.1	Zfp2	NP_001038163.1	ILMN_2496455	005260086	S	2818	TGCCTTTATAAGATTGGGCCATAGGCATACCTACAGGGCATTTTCCTAAT	11	-	50712430-50712479	11qB1.3	Mus musculus zinc finger protein 2 (Zfp2), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9930007F06Rik; Fnp-2; mszf87; mkr-2; MGC107189; Zfp-2	9930007F06Rik; Fnp-2; mszf87; mkr-2; MGC107189; Zfp-2
Mus musculus	RefSeq	ILMN_187317	ILMN_244207	ZFP2	NM_001044698.1	NM_001044698.1		22678	113374177	NM_001044698.1	Zfp2	NP_001038163.1	ILMN_2443065	001980743	S	1492	CCTTTAGTCAAAGTACATACCTTATAGAACATCAGAGACTTCACTCCGGA	11	-	50713756-50713805	11qB1.3	Mus musculus zinc finger protein 2 (Zfp2), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9930007F06Rik; Fnp-2; mszf87; mkr-2; MGC107189; Zfp-2	9930007F06Rik; Fnp-2; mszf87; mkr-2; MGC107189; Zfp-2
Mus musculus	RefSeq	ILMN_187317	ILMN_244207	ZFP2	NM_001044698.1	NM_001044698.1		22678	113374177	NM_001044698.1	Zfp2	NP_001038163.1	ILMN_2471939	002260193	S	2677	AAATACATATCTTTGTGTCTTATTGGAGAGTCATAGAAATTTAAATACAG	11	-	50712571-50712620	11qB1.3	Mus musculus zinc finger protein 2 (Zfp2), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9930007F06Rik; Fnp-2; mszf87; mkr-2; MGC107189; Zfp-2	9930007F06Rik; Fnp-2; mszf87; mkr-2; MGC107189; Zfp-2
Mus musculus	RefSeq	ILMN_196893	ILMN_196893	LOC328082	XM_286414.3	XM_286414.3		328082	94392531	XM_286414.3	LOC328082	XP_286414.1	ILMN_1257951	005900273	S	509	AGAAGAGGACTGGAGGAAGCATGAGGGGGCGGAGGCGGCAGACAATGAAA	12	+	38105536-38105585		PREDICTED: Mus musculus hypothetical LOC328082 (LOC328082), mRNA.					
Mus musculus	MEEBO	ILMN_217730	ILMN_217730	D430018P08	scl00234353.1_272	NM_177698.2			31343265	NM_177698.2	D430018P08		ILMN_1212644	002030446	S	2769	GTCTGTCAAGCTGCATTAACCTGTGTCAGAAAGGAAGGTGTAAAGGGCAC										
Mus musculus	RefSeq	ILMN_199388	ILMN_199388	OLFR1223	NM_146892.1	NM_146892.1			22129102	NM_146892.1	Olfr1223		ILMN_1227952	000830131	S	674	GATCTCACAGTTCTGAAGGGTGGAGTAAAGCTCTATCTACCTGTGGATCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219742	ILMN_225494	1700021F07RIK	XM_913802.2	XM_913802.2		72221	94367649	XM_913802.2	1700021F07Rik	XP_918895.1	ILMN_1255693	006580575	S	252	GCCCAAGCCTGAGCTGCCTAGCCACTTCTATGTCCGTCCAGTGAGCCCCA				2qH4	PREDICTED: Mus musculus RIKEN cDNA 1700021F07 gene (1700021F07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213049	ILMN_213049	SLC23A1	NM_011397.3	NM_011397.3		20522	42741685	NM_011397.3	Slc23a1	NP_035527.3	ILMN_2633002	006420731	S	2303	TAATATTAAATGACATACTGGACCAATAATTTAAAAAAGTTTAGATAAGT	18	-	35774905-35774954	18qB2	Mus musculus solute carrier family 23 (nucleobase transporters), member 1 (Slc23a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	D18Ucla2; YSPL3; Slc23a2; SVCT1	D18Ucla2; YSPL3; Slc23a2; SVCT1
Mus musculus	RefSeq	ILMN_217271	ILMN_217271	PLOD1	NM_011122.1	NM_011122.1		18822	6755105	NM_011122.1	Plod1	NP_035252.1	ILMN_2681289	001740504	S	2698	ACTGTAACTCGAAATCCTCCCGGGGGGCAGGAAAGACATCTGTGACAATG	4	-	146753985-146754034	4qE2	Mus musculus procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 (Plod1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2 [goid 8475] [evidence IEA]	Plod; LH1; AI854890; 2410042F05Rik; AV007929	Plod; LH1; AI854890; 2410042F05Rik; AV007929
Mus musculus	RefSeq	ILMN_211242	ILMN_211242	POPDC2	NM_022318.2	NM_022318.2		64082	126517506	NM_022318.2	Popdc2	NP_071713.1	ILMN_2613923	004570224	S	1746	CATCCTTTATGGGTTGCAGGACATTGCCAGGTTTACACGGCCTCTGAGCC	16	+	38378021-38378070	16qB3	Mus musculus popeye domain containing 2 (Popdc2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]			Pop2; AV006127	Pop2; AV006127
Mus musculus	RefSeq	ILMN_211242	ILMN_211242	POPDC2	NM_022318.2	NM_022318.2		64082	126517506	NM_022318.2	Popdc2	NP_071713.1	ILMN_3128351	003890273	A	1845	GTGAGCTGATTGGGTAGAGCACCTATGACAGGACATGGCGTCCTGCAAGC	16	+	38378120-38378169	16qB3	Mus musculus popeye domain containing 2 (Popdc2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]			Pop2; AV006127	Pop2; AV006127
Mus musculus	MEEBO	ILMN_218627	ILMN_218627	D15ERTD621E	scl47892.24_470	NM_145959.1			22122392	NM_145959.1	D15Ertd621e		ILMN_2698239	006590612	S	4360	CCCTCTCTTGTGTAACATGTGTAACCAGATGCTTTTGCATTTGTTTGAGG										
Mus musculus	RefSeq	ILMN_190857	ILMN_234854	NRG4	NM_032002.1	NM_032002.1		83961	14030776	NM_032002.1	Nrg4	NP_114391.1	ILMN_1220275	001170156	S	434	GCATCATTACCTACAAAGGCGGACTGTGGACCATACGACGAGAGAAGCCC	9	-	55074558-55074561:55075660-55075705	9qB	Mus musculus neuregulin 4 (Nrg4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	AI552600	AI552600
Mus musculus	RefSeq	ILMN_217418	ILMN_217418	AGPAT2	NM_026212.1	NM_026212.1		67512	23956161	NM_026212.1	Agpat2	NP_080488.1	ILMN_1215901	003130121	S	504	GATCTACCCAGAGGGTACACGCAACGACAATGGGGACCTGTTGCCCTTTA	2	-	26451634-26451683	2qA3	Mus musculus 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) (Agpat2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence NAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IDA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	LPAAB; BSCL1; AV000834; 2510002J07Rik; LPAAT-beta; BSCL	LPAAB; BSCL1; AV000834; 2510002J07Rik; LPAAT-beta; BSCL
Mus musculus	RefSeq	ILMN_221436	ILMN_221436	KIF11	NM_010615.1	NM_010615.1		16551	45476576	NM_010615.1	Kif11	NP_034745.1	ILMN_2866970	002360189	S	4301	GGCACAGTCTCACTATGGAGCTCAGGCTGGCTTTGGACTCACTATGCAGC	19	+	37495831-37495880	19qC2	Mus musculus kinesin family member 11 (Kif11), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Separation of duplicated centrosome components at the beginning of mitosis. The centriole pair within each centrosome becomes part of a separate microtubule organizing center that nucleates a radial array of microtubules called an aster. The two asters move to opposite sides of the nucleus to form the two poles of the mitotic spindle [goid 7100] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Eg5; Kifl1; Knsl1; Kif8	Eg5; Kifl1; Knsl1; Kif8
Mus musculus	MEEBO	ILMN_187933	ILMN_187933	D630004K10RIK	scl5195.2.1_305						D630004K10Rik		ILMN_1234618	001230743	S	16	CACGATGTCCAACTCCAGCCCACATGTAAGGACGCTTCTTTGCCTGGATG										
Mus musculus	RefSeq	ILMN_200476	ILMN_311947	LOC100047016	XM_001477228.1	XM_001477228.1		100047016	149254347	XM_001477228.1	LOC100047016	XP_001477278.1	ILMN_1260231	002690451	S	433	GACGCGGTCAGCCAGCATAAGAGCACCCTGCTGGAGTTCTACGTGAAGAA					PREDICTED: Mus musculus similar to GCN1 general control of amino-acid synthesis 1-like 1 (LOC100047016), mRNA.					
Mus musculus	RefSeq	ILMN_218617	ILMN_311947	LOC100047016	XM_001477228.1	XM_001477228.1		100047016	149254347	XM_001477228.1	LOC100047016	XP_001477278.1	ILMN_1253877	006650243	S	1316	CCAAGCTGAGCGGCTTTTGGCAGCTGGTTGTGGATGAGAAGAGGCAGACT					PREDICTED: Mus musculus similar to GCN1 general control of amino-acid synthesis 1-like 1 (LOC100047016), mRNA.					
Mus musculus	RefSeq	ILMN_217424	ILMN_311947	LOC100047016	XM_001477228.1	XM_001477228.1		100047016	149254347	XM_001477228.1	LOC100047016	XP_001477278.1	ILMN_1250969	004610333	S	7164	GACTGACGAAGAGCTCAACACTGTCCTTCAGCAGTGCCTGCTAGCTGACG					PREDICTED: Mus musculus similar to GCN1 general control of amino-acid synthesis 1-like 1 (LOC100047016), mRNA.					
Mus musculus	Riken	ILMN_203056	ILMN_203056	A930008G09RIK	ri|A930008G09|PX00065H13|AK044345|1585					AK044345	A930008G09Rik		ILMN_2554403	004390463	S	1284	TGTATTAATTATGAGTGGGTTTCATAGGATAGCTGAGCTTTTTTGGGCTG										
Mus musculus	MEEBO	ILMN_219918	ILMN_219918	GOLGA2	scl21063.24_624	NM_133852.1			19527071	NM_133852.1	Golga2		ILMN_2715201	002650746	S	4028	CTGGGAACCTTATTTATTGGTAGTGTTAGGTCAGAGGGCAGGAGGCGGAG						The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]				
Mus musculus	RefSeq	ILMN_214318	ILMN_214318	CTDSP2	NM_146012.1	NM_146012.1		52468	22122478	NM_146012.1	Ctdsp2	NP_666124.1	ILMN_2863264	002630369	S	3930	TGCCTGTCCTTACCCCGGATCTGGCTATTCCCGTGATGCCATTTGGAGGG	10	+	126436824-126436873	10qD3	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 (Ctdsp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	SCP2; D10Ertd73e; OS4; AI586070; OS-4; MGC38258	SCP2; D10Ertd73e; OS4; AI586070; OS-4; MGC38258
Mus musculus	RefSeq	ILMN_214318	ILMN_214318	CTDSP2	NM_146012.1	NM_146012.1		52468	22122478	NM_146012.1	Ctdsp2	NP_666124.1	ILMN_2724635	006520468	S	4052	TTGTATTCAAAAACTTGAACTGTAGGATGCCATTAAGAGTCTGTTTATAT	10	+	126436946-126436995	10qD3	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 (Ctdsp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	SCP2; D10Ertd73e; OS4; AI586070; OS-4; MGC38258	SCP2; D10Ertd73e; OS4; AI586070; OS-4; MGC38258
Mus musculus	Riken	ILMN_205911	ILMN_205911	A830009P14RIK	ri|A830009P14|PX00154I01|AK043580|1647					AK043580	A830009P14Rik		ILMN_1218383	007610544	S	1381	AGGGTAACAACCTGAGTACATACGGGGTACAGTAGAGTTTTCCCTCGACG										
Mus musculus	Riken	ILMN_205885	ILMN_205885	A430028D19RIK	ri|A430028D19|PX00134J04|AK039913|1209					AK039913	A430028D19Rik		ILMN_1257912	000270424	S	860	AAAGGGTCGTGCCTGTGTCCCGGGTGTGAGAGACTTGCAGGACTACAGAG										
Mus musculus	MEEBO	ILMN_224087	ILMN_224087	HIST1H1C	scl44989.1_487				9845256	NM_015786	Hist1h1c		ILMN_2774537	007650273	S	1401	CCTCAGCTTCCCGAAGCGCTTGCTTTATACGTGTGTGTCGTCACTGAAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another [goid 16584] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_222328	ILMN_222328	RAI1	scl0019377.2_133	NM_009021.1			6677662	NM_009021.1	Rai1		ILMN_2748081	002940500	S	6961	ACATGGTCCACATATCCTCTTCCTGCCTATCACTGGTTCCTTGGTAACTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201152	ILMN_201152	LOC382039	XM_356113.1	XM_356113.1			38089493	XM_356113.1	LOC382039		ILMN_1226405	003400341	S	603	CACTCTGGCATCACACGGCAGCAAACCTCTCTGAGGAGCCATCCCAAGCT										
Mus musculus	RefSeq	ILMN_196490	ILMN_196490	5830411G16RIK	XM_132538.6	XM_132538.6		78937	94377387	XM_132538.6	5830411G16Rik	XP_132538.5	ILMN_1233082	000060487	S	1354	CCAGGGCTCATTTCTGGTTTGGAAGAAGACCAATATGGCATGCCTCTGGC	6	+	56686908-56686957	6qB3	PREDICTED: Mus musculus RIKEN cDNA 5830411G16 gene, transcript variant 1 (5830411G16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196490	ILMN_196490	5830411G16RIK	XM_132538.6	XM_132538.6		78937	94377387	XM_132538.6	5830411G16Rik	XP_132538.5	ILMN_2709585	006400468	S	6502	TCTCTTTCCTCCAGTGGCTTTGTAGTTTGTGCCGGTTCATTTCTGTTGTC	6	+	56711735-56711784	6qB3	PREDICTED: Mus musculus RIKEN cDNA 5830411G16 gene, transcript variant 1 (5830411G16Rik), mRNA.					
Mus musculus	MEEBO	ILMN_185355	ILMN_185355	ZIC4	scl6439.1.1_330				6677646	NM_009576	Zic4		ILMN_1246325	000990360	S	15	GCCGTACAAGATGTTTGCTGACATGCTAGGGGAATAAAGAACAAGAGCCC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185355	ILMN_185355	ZIC4	scl6439.1.1_330				6677646	NM_009576	Zic4		ILMN_1213145	002630725	S	20	TGCGGCGGTGGTTGTGCGTGGCACAGACGTGAGCGAATGGTACGTGTGTT						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218342	ILMN_218342	CYP4B1	NM_007823.2	NM_007823.2		13120	118131158	NM_007823.2	Cyp4b1	NP_031849.1	ILMN_2790496	004010162	S	1173	CCAGCTCAGCAAGCCAGTAACCTTTGTGGATGGCCGCTCTCTACCTGCAG	4	-	115298493-115298493:115299412-115299460	4qD1	Mus musculus cytochrome P450, family 4, subfamily b, polypeptide 1 (Cyp4b1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208705	ILMN_208705	4932438H23RIK	NM_028905.1	NM_028905.1		74387	19920333	NM_028905.1	4932438H23Rik	NP_083181.1	ILMN_2955173	006270100	S	2194	GCCTCAAATTTACACACACAGCATTGTTGTGTGGGGAAGTCCTTTTCTGG	16	-	90943234-90943283	16qC3.3	Mus musculus RIKEN cDNA 4932438H23 gene (4932438H23Rik), mRNA.				AI550392; 4931406G06Rik	AI550392; 4931406G06Rik
Mus musculus	MEEBO	ILMN_188054	ILMN_188054	SCAVENGER RECEPTOR	scl000744.1_106				192737	M59445	scavenger receptor		ILMN_2449412	005360082	S	5	CGGGCTGGACAAGTTGTCTGCCGGAGTCTAGGATACCAAGAAGTTCTAGC										
Mus musculus	RefSeq	ILMN_212522	ILMN_212522	LAPTM5	NM_010686.3	NM_010686.3		16792	145301582	NM_010686.3	Laptm5	NP_034816.1	ILMN_1217849	000940438	S	2323	GTTCCCACTGTACCTGTGTCATTGCTTGTGTATGACTTGGAAGAAGGGCC				4qD2.3	Mus musculus lysosomal-associated protein transmembrane 5 (Laptm5), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		E3	E3
Mus musculus	RefSeq	ILMN_198283	ILMN_231723	JMJD1B	NM_001081256.1	NM_001081256.1		277250	124486934	NM_001081256.1	Jmjd1b	NP_001074725.1	ILMN_1244674	006220468	S	510	GCTGGGGTTGGGGTCTGTGGTGCCAGTTGAATACCTTGTGGATCGAGAGC	18	+	34954127-34954176	18qB1	Mus musculus jumonji domain containing 1B (Jmjd1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	mKIAA1082; 5830462I21Rik	mKIAA1082; 5830462I21Rik
Mus musculus	RefSeq	ILMN_211023	ILMN_231723	JMJD1B	NM_001081256.1	NM_001081256.1		277250	124486934	NM_001081256.1	Jmjd1b	NP_001074725.1	ILMN_2611699	000270129	S	6674	TGTATTTTAATTTTATTGAAGGGCTGATTGGGATTTCCATGTTCTTATTA	18	+	34998586-34998635	18qB1	Mus musculus jumonji domain containing 1B (Jmjd1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	mKIAA1082; 5830462I21Rik	mKIAA1082; 5830462I21Rik
Mus musculus	Riken	ILMN_205477	ILMN_205477	D030040K20RIK	ri|D030040K20|PX00180B09|AK050932|1969					AK050932	D030040K20Rik		ILMN_1219097	004730435	S	1404	CCCTATATAGAGACCCAGTTCCTGAGGGTTGGCTGACTTCCACATGTAAT										
Mus musculus	RefSeq	ILMN_234056	ILMN_234056	ENSMUSG00000068790	NM_001029930.1	NM_001029930.1		545007	71480141	NM_001029930.1	ENSMUSG00000068790	NP_001025101.1	ILMN_3070389	001990021	I	1531	CTCTGCACTCTTCATGGGACTTGGGCTCCATAGTTTCTTCTGAGCTGGAC	14	+	4144118-4144167	14qA1	Mus musculus predicted gene, ENSMUSG00000068790 (ENSMUSG00000068790), mRNA.					
Mus musculus	RefSeq	ILMN_234056	ILMN_234056	ENSMUSG00000068790	NM_001029930.1	NM_001029930.1		545007	71480141	NM_001029930.1	ENSMUSG00000068790	NP_001025101.1	ILMN_3149058	007510681	A	354	AGGATGAACACTGAATTCAACATCATTAAATCACAACATGAGAAGACAAT	14	+	4137816-4137817:4138768-4138815	14qA1	Mus musculus predicted gene, ENSMUSG00000068790 (ENSMUSG00000068790), mRNA.					
Mus musculus	RefSeq	ILMN_213723	ILMN_213723	AOX1	NM_009676.2	NM_009676.2		11761	110347466	NM_009676.2	Aox1	NP_033806.2	ILMN_2679131	001030309	S	194	GGGCCTGCACAGTGATGATCTCGCGGTACAACCCCAGCACCAAGGCGATC	1	+	58100431-58100480	1qC1.3	Mus musculus aldehyde oxidase 1 (Aox1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with molybdenum (Mo) ions [goid 30151] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: an aldehyde + H2O + O2 = a carboxylic acid + H2O2 [goid 4031] [evidence IDA]	Ro; Ao; MGC13774; AI255253; Aox2; Moro; AI196512; Aox-1; Aox-2	Ro; Ao; MGC13774; AI255253; Aox2; Moro; AI196512; Aox-1; Aox-2
Mus musculus	Riken	ILMN_202888	ILMN_202888	5530402F09RIK	ri|5530402F09|PX00023O23|AK030703|2561					AK030703	5530402F09Rik		ILMN_1229178	004900521	S	2257	GCCAAAGCATGCCCCTTGCTCTTAGTAATCAGACCGTTGACGGCACTAGC										
Mus musculus	RefSeq	ILMN_219863	ILMN_219863	OLFR1243	NM_146969.1	NM_146969.1		258971	22128988	NM_146969.1	Olfr1243	NP_667180.1	ILMN_2714522	005860110	S	792	CATTGATAAATATATTGCTGTGTTTTATACGGTTGTTAGTCCTATGCTTA	2	-	89367724-89367773	2qE1	Mus musculus olfactory receptor 1243 (Olfr1243), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR231-4	MOR231-4
Mus musculus	RefSeq	ILMN_218043	ILMN_218043	B930041G04	NM_177750.2	NM_177750.2		245643	31343124	NM_177750.2	B930041G04	NP_808418.1	ILMN_2892280	003450746	S	3081	TGGAAAAGAGGGTCCGTATTCCAAACAGGAGCCCTTGCACTTTCAAAGGC	X	+	135740844-135740893	XqF1	Mus musculus hypothetical protein B930041G04 (B930041G04), mRNA.				RP23-137E3.1	RP23-137E3.1
Mus musculus	RefSeq	ILMN_215348	ILMN_235455	BAT2D	XM_896646.2	XM_896646.2		226562	94364476	XM_896646.2	Bat2d	XP_901739.1	ILMN_1253906	002750221	S	11141	GGGTTTTGTCACATTGGCCTTCTTACTAAGTCACTGTCGCCCAACTGTTT	1	-	164507529-164507578	1qH2.1	PREDICTED: Mus musculus BAT2 domain containing 1, transcript variant 4 (Bat2d), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_186495	ILMN_244290	ARHGEF9	NM_001033329.2	NM_001033329.2		236915	142384851	NM_001033329.2	Arhgef9	NP_001028501.1	ILMN_2436010	006450689	S	247	ACGCGCTGAATGGAGTCCAGCCACCTGAGCTGTTGCGAACTCTCACTTTG	X	-	92361076-92361125	XqC3	Mus musculus CDC42 guanine nucleotide exchange factor (GEF) 9 (Arhgef9), mRNA. XM_895391 XM_895403 XM_895418 XM_895426 XM_895438 XM_904519 XM_918869 XM_918880 XM_918888 XM_918896 XM_918905 XM_918911 XM_918919 XM_918928 XM_918933	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence TAS]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence TAS]	mKIAA0424; 9630036L12Rik; A230067K14	mKIAA0424; 9630036L12Rik; A230067K14
Mus musculus	RefSeq	ILMN_211034	ILMN_244290	ARHGEF9	NM_001033329.2	NM_001033329.2		236915	142384851	NM_001033329.2	Arhgef9	NP_001028501.1	ILMN_1254985	001170341	S	3548	CTGAGGTAGAACACTGAAGTTATTTCTTGGCAGGGTTTCCATTTGACCAG	X	-	92245697-92245746	XqC3	Mus musculus CDC42 guanine nucleotide exchange factor (GEF) 9 (Arhgef9), mRNA. XM_895391 XM_895403 XM_895418 XM_895426 XM_895438 XM_904519 XM_918869 XM_918880 XM_918888 XM_918896 XM_918905 XM_918911 XM_918919 XM_918928 XM_918933	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence TAS]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence TAS]	mKIAA0424; 9630036L12Rik; A230067K14	mKIAA0424; 9630036L12Rik; A230067K14
Mus musculus	RefSeq	ILMN_209905	ILMN_209905	ERCC8	NM_028042.3	NM_028042.3		71991	141803053	NM_028042.3	Ercc8	NP_082318.2	ILMN_2600315	004570209	S	1531	AGTCAGTTTTTAACCTGTTAATCCTGAGTTTGGGATATTTCCCTGTGTGC	13	+	108984599-108984648	13qD2.1	Mus musculus excision repaiross-complementing rodent repair deficiency, complementation group 8 (Ercc8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISO]; Any complex formed of proteins that act in nucleotide-excision repair [goid 109] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ckn1; B130065P18Rik; 2810431L23Rik; Csa; 4631412O06Rik; 2410022P04Rik	Ckn1; B130065P18Rik; 2810431L23Rik; Csa; 4631412O06Rik; 2410022P04Rik
Mus musculus	RefSeq	ILMN_209905	ILMN_209905	ERCC8	NM_028042.3	NM_028042.3		71991	141803053	NM_028042.3	Ercc8	NP_082318.2	ILMN_2629069	007510079	S	143	GCTGGAGTTAAACAAAGACAGGGATGTGGAAAGAATCCATGGCAGTGGGG	13	+	108950838-108950887	13qD2.1	Mus musculus excision repaiross-complementing rodent repair deficiency, complementation group 8 (Ercc8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISO]; Any complex formed of proteins that act in nucleotide-excision repair [goid 109] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ckn1; B130065P18Rik; 2810431L23Rik; Csa; 4631412O06Rik; 2410022P04Rik	Ckn1; B130065P18Rik; 2810431L23Rik; Csa; 4631412O06Rik; 2410022P04Rik
Mus musculus	RefSeq	ILMN_209905	ILMN_209905	ERCC8	NM_028042.3	NM_028042.3		71991	141803053	NM_028042.3	Ercc8	NP_082318.2	ILMN_2719001	007650224	S	966	AGCTCAGAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGCTGTGTACGC	13	+	108973985-108974034	13qD2.1	Mus musculus excision repaiross-complementing rodent repair deficiency, complementation group 8 (Ercc8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISO]; Any complex formed of proteins that act in nucleotide-excision repair [goid 109] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ckn1; B130065P18Rik; 2810431L23Rik; Csa; 4631412O06Rik; 2410022P04Rik	Ckn1; B130065P18Rik; 2810431L23Rik; Csa; 4631412O06Rik; 2410022P04Rik
Mus musculus	RefSeq	ILMN_213128	ILMN_244308	4930473A06RIK	NM_001081012.1	NM_001081012.1		320226	124486601	NM_001081012.1	4930473A06Rik	NP_001074481.1	ILMN_1244581	000870553	S	4182	CGATACAACTTACACTTTCTTAAAGGAGACGTTCGTGAACACAGCCCCCC	4	+	83510231-83510280	4qC3	Mus musculus RIKEN cDNA 4930473A06 gene (4930473A06Rik), mRNA.				A330015D16Rik; 4930418J05Rik	A330015D16Rik; 4930418J05Rik
Mus musculus	RefSeq	ILMN_213128	ILMN_244308	4930473A06RIK	NM_001081012.1	NM_001081012.1		320226	124486601	NM_001081012.1	4930473A06Rik	NP_001074481.1	ILMN_2723431	007150079	S	3683	AGGACAAGCGTCGACTGGAGGAGAACATCCGTGATGCAGAGAGTGCCCTC	4	+	83388914-83388963	4qC3	Mus musculus RIKEN cDNA 4930473A06 gene (4930473A06Rik), mRNA.				A330015D16Rik; 4930418J05Rik	A330015D16Rik; 4930418J05Rik
Mus musculus	RefSeq	ILMN_213128	ILMN_244308	4930473A06RIK	NM_001081012.1	NM_001081012.1		320226	124486601	NM_001081012.1	4930473A06Rik	NP_001074481.1	ILMN_2638708	005870347	S	2463	TTCGCACTTCAAAACCACATTGTCCAGGACGCAGAGGGAACAGACGTGCT	4	+	83326989-83327038	4qC3	Mus musculus RIKEN cDNA 4930473A06 gene (4930473A06Rik), mRNA.				A330015D16Rik; 4930418J05Rik	A330015D16Rik; 4930418J05Rik
Mus musculus	RefSeq	ILMN_210792	ILMN_244308	4930473A06RIK	NM_001081012.1	NM_001081012.1		320226	124486601	NM_001081012.1	4930473A06Rik	NP_001074481.1	ILMN_2609237	006200646	S	1309	GTGGCTGACCTGGAAATGATCAAGAACGAATTCAAAGAGGTTGAGAGTGC	4	+	83249986-83250035	4qC3	Mus musculus RIKEN cDNA 4930473A06 gene (4930473A06Rik), mRNA.				A330015D16Rik; 4930418J05Rik	A330015D16Rik; 4930418J05Rik
Mus musculus	RefSeq	ILMN_189632	ILMN_331696	FUZ	NM_027376.2	NM_027376.2		70300	153791378	NM_027376.2	Fuz	NP_081652.1	ILMN_1239948	004730154	S	715	TGCTTGTATCAGGCCGAGTGGTGGCAGCGACAGAGGGCTGGTGGCGCCTA				7qB4	Mus musculus fuzzy homolog (Drosophila) (Fuz), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]			2600013E07Rik	2600013E07Rik
Mus musculus	RefSeq	ILMN_208784	ILMN_208784	DARS	NM_145507.1	NM_145507.1		226414	21703997	NM_145507.1	Dars	NP_663482.1	ILMN_2589477	006200121	S	540	CTGAACCTCGCCTGCCCTTGCAGCTGGATGATGCCATTCGGCCTGAAGTG	1	-	130285707-130285756	1qE4	Mus musculus aspartyl-tRNA synthetase (Dars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6422] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp) [goid 4815] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	5730439G15Rik	5730439G15Rik
Mus musculus	RefSeq	ILMN_208784	ILMN_208784	DARS	NM_145507.1	NM_145507.1		226414	21703997	NM_145507.1	Dars	NP_663482.1	ILMN_3102333	003450689	A	1556	CGCCAGACCTCAATGTTCCCTCGTGACCCCAAACGACTCACGCCTTAAAG	1	-	130260808-130260810:130260811-130260857	1qE4	Mus musculus aspartyl-tRNA synthetase (Dars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6422] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp) [goid 4815] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	5730439G15Rik	5730439G15Rik
Mus musculus	RefSeq	ILMN_215386	ILMN_215386	SMURF1	NM_029438.3	NM_029438.3		75788	87044885	NM_029438.3	Smurf1	NP_083714.3	ILMN_2772256	005310543	S	2541	CGGGCTGAGGCCTGAGATTCCAGAAACCGAGGGAAAAGGCTCGTCTCCCT	5	-	145640097-145640146	5qG2	Mus musculus SMAD specific E3 ubiquitin protein ligase 1 (Smurf1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process by which a ubiquitin moiety, or multiple moieties, are covalently attached to the target protein, thereby initiating the degradation of that protein [goid 42787] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IMP]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISS]	mKIAA1625; 4930431E10Rik	mKIAA1625; 4930431E10Rik
Mus musculus	RefSeq	ILMN_215386	ILMN_215386	SMURF1	NM_029438.3	NM_029438.3		75788	87044885	NM_029438.3	Smurf1	NP_083714.3	ILMN_3109269	002680059	A	2284	AAGGCGCGGCAGGGCCCCGGCTGTTCACCATTCACCTGATAGACGCCAAT	5	-	145641522-145641569:145642487-145642488	5qG2	Mus musculus SMAD specific E3 ubiquitin protein ligase 1 (Smurf1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process by which a ubiquitin moiety, or multiple moieties, are covalently attached to the target protein, thereby initiating the degradation of that protein [goid 42787] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IMP]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISS]	mKIAA1625; 4930431E10Rik	mKIAA1625; 4930431E10Rik
Mus musculus	RefSeq	ILMN_211724	ILMN_211724	PHC2	NM_018774.3	NM_018774.3		54383	146149145	NM_018774.3	Phc2	NP_061244.1	ILMN_1226754	007650139	S	3712	GGGGCGGGCACTTTTTCAGCTTGCTATAACCCCTTCCCCATACCTCCAGG				4qD2.2	Mus musculus polyhomeotic-like 2 (Drosophila) (Phc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D4Ertd810e; Mph2; D130050K19Rik; AA415044; Edr2	D4Ertd810e; Mph2; D130050K19Rik; AA415044; Edr2
Mus musculus	Riken	ILMN_203910	ILMN_203910	9630041B11RIK	ri|9630041B11|PX00116F22|AK036146|3294					AK036146	9630041B11Rik		ILMN_2560910	004830156	S	2982	CAGCCAGGGAGGAACAGCAACACTCTGCTGTAAGAAACAACCTGCATGCC										
Mus musculus	RefSeq	ILMN_223037	ILMN_223037	DTNA	NM_010087.3	NM_010087.3		13527	95113654	NM_010087.3	Dtna	NP_034217.2	ILMN_1221805	001260025	S	1615	CTTATCACTGTCAAGACTGGGCTTTACTTTCTGTTTTTAGGGCGCTGCTC	18	+	23762656-23762705	18qA2	Mus musculus dystrobrevin alpha (Dtna), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex comprising alpha- and beta-dystrobrevin; forms part of the dystrophin glycoprotein complex [goid 16014] [evidence NAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence TAS]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2210407P21Rik; adbn; Dtn; A0; a-DB-1	2210407P21Rik; adbn; Dtn; A0; a-DB-1
Mus musculus	RefSeq	ILMN_223607	ILMN_223607	OLFR57	NM_147041.1	NM_147041.1		18357	33238875	NM_147041.1	Olfr57	NP_667252.1	ILMN_2766433	000270215	S	591	TATGGTAATTTACATTACAGCTATGCTACTGGCTGTTGGCCCCTTCTCTG	10	+	78498133-78498182	10qC1	Mus musculus olfactory receptor 57 (Olfr57), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR139-3; IF12	MOR139-3; IF12
Mus musculus	RefSeq	ILMN_217590	ILMN_245663	ABCC3	NM_029600.3	NM_029600.3		76408	90403594	NM_029600.3	Abcc3	NP_083876.3	ILMN_2685157	004780040	S	4617	CGGGACTTGCCTAGATGATGCATTCCAAGGGTTTCTTCCTTGTCAGATGG	11	-	94204944-94204980:94204981-94204993	11qD	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 3 (Abcc3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	 [goid 15722] [evidence ISO]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence ISO]	MRP3; MLP2; ABC31; MOAT-D; 1700019L09Rik	MRP3; MLP2; ABC31; MOAT-D; 1700019L09Rik
Mus musculus	RefSeq	ILMN_186377	ILMN_186377	UBE2D1	NM_145420.1	NM_145420.1		216080	21703837	NM_145420.1	Ube2d1	NP_663395.1	ILMN_2435025	001820685	S	1215	GTACTTGACTTAACTTTATTGCAATGTGAATTAATTGCACTGTTAGGTAG	10	-	70717865-70717914	10qB5.3	Mus musculus ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast) (Ube2d1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	UBCH5; MGC28550	UBCH5; MGC28550
Mus musculus	RefSeq	ILMN_196730	ILMN_196730	HIST1H2AK	NM_178183.1	NM_178183.1		319169	30061370	NM_178183.1	Hist1h2ak	NP_835490.1	ILMN_2847144	003130609	S	1	ATGTCAGGAAGAGGCAAGCAGGGTGGCAAGGCTCGCGCCAAGGCCAAGAC	13	-	21845646-21845695	13qA3.1	Mus musculus histone cluster 1, H2ak (Hist1h2ak), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195122	ILMN_195122	NRSN1	NM_009513.1	NM_009513.1		22360	6678576	NM_009513.1	Nrsn1	NP_033539.1	ILMN_1231196	004050537	S	1755	CCTTAAAAAGCATTTAAATCGTCAAACAGGAAAAACGGAGCCCCAGATCC	13	-	25344193-25344242	13qA3.1	Mus musculus neurensin 1 (Nrsn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 12445626] [evidence IEP]		Vmp; Neuro-p24; Neurensin-1	Vmp; Neuro-p24; Neurensin-1
Mus musculus	RefSeq	ILMN_223272	ILMN_318619	LOC100041103	XM_001476013.1	XM_001476013.1		100041103	149258384	XM_001476013.1	LOC100041103	XP_001476063.1	ILMN_2761720	007400400	S	662	CCAGCCTTGAGAATGTAGGGAAGGAGCTCTTGAACACAACACAGCCTCTG	8	-	13952210-13952259	8qA1.1	PREDICTED: Mus musculus hypothetical protein LOC100041103 (LOC100041103), mRNA.					
Mus musculus	RefSeq	ILMN_231589	ILMN_231589	BEX4	NM_212457.1	NM_212457.1		406217	47059052	NM_212457.1	Bex4	NP_997622.1	ILMN_3118584	002480523	A	498	GAGGCCTTACAGGCGTTTCCGAACCCCGGAACCTGACAATCATTACGACT	X	+	132674690-132674739	XqF1	Mus musculus brain expressed gene 4 (Bex4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_231589	ILMN_231589	BEX4	NM_212457.1	NM_212457.1		406217	47059052	NM_212457.1	Bex4	NP_997622.1	ILMN_3043587	001410619	I	108	GGAGGAAGAGCGGAGCAGGTCTGAGAAGCAGAAGCTTCGCGGCGCACCTG	X	+	132673689-132673705:132674062-132674094	XqF1	Mus musculus brain expressed gene 4 (Bex4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_221083	ILMN_221083	CCT6B	NM_009839.1	NM_009839.1		12467	6753325	NM_009839.1	Cct6b	NP_033969.1	ILMN_2730840	006200563	S	1697	CTGGAAGACAAGATTTTATACGTGTCATACCCAGCAGCGTCACATGGCCT	11	-	82532792-82532841	11qC	Mus musculus chaperonin containing Tcp1, subunit 6b (zeta) (Cct6b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CCTzeta-2; Cctz-2	CCTzeta-2; Cctz-2
Mus musculus	Riken	ILMN_207445	ILMN_207445	WWOX	ri|C630002P05|PX00669N20|AK083096|3764					AK083096	Wwox		ILMN_2587651	003130730	S	3646	GGGTGAGCCTAAAAATGCCACGGGTGTGAACCTGTTCCAGAGCAGAGCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211813	ILMN_211813	OLFR1134	NM_147030.1	NM_147030.1		259032	22128884	NM_147030.1	Olfr1134	NP_667241.1	ILMN_2826748	001170594	S	698	GCAGGCACAAAGCATTTTCCACATGTGCCTCCCATCTTATGGCTGTGGCT	2	-	87496329-87496378	2qD	Mus musculus olfactory receptor 1134 (Olfr1134), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR176-1	MOR176-1
Mus musculus	RefSeq	ILMN_215583	ILMN_215583	AKP2	NM_007431.1	NM_007431.1		11647	6671532	NM_007431.1	Akp2	NP_031457.1	ILMN_2661287	007200717	S	2157	CTGGGGGGAAGACCAGGTCTGCTCAGGATGAGACTCCCAGGAAGCCACCT	4	-	137297902-137297951	4qD3	Mus musculus alkaline phosphatase 2, liver (Akp2), mRNA.				Akp-2; TNSALP; TNAP	Akp-2; TNSALP; TNAP
Mus musculus	MEEBO	ILMN_194554	ILMN_194554	HS6ST2	scl54262.7_282				7657189	NM_015819	Hs6st2		ILMN_2720389	007400671	S	562	TCAAACTTCAACTCAGGCGCCAACTCTCCATCCTCCACAAAGCCCCGGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197663	ILMN_320969	LOC672946	XM_001474273.1	XM_001474273.1		672946	149267033	XM_001474273.1	LOC672946	XP_001474323.1	ILMN_2528920	007610347	S	3230	ACTGTCTCAACCACCAGGTCACGGCTACCTTCACAGTTTCGGAGGGGACC					PREDICTED: Mus musculus similar to kelch domain containing 7B (LOC672946), mRNA.					
Mus musculus	RefSeq	ILMN_221844	ILMN_221844	HMGB4	NM_027036.3	NM_027036.3		69317	148277099	NM_027036.3	Hmgb4	NP_081312.2	ILMN_2741149	001090292	S	618	GGCAGGAAGGGGAATTTCTTGGAATCAGCCAAGACCAGTTTGAAACAATA				4qD2.2	Mus musculus high-mobility group box 4 (Hmgb4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC107306; RP23-284L15.1; 1700001F22Rik; AI326135	MGC107306; RP23-284L15.1; 1700001F22Rik; AI326135
Mus musculus	RefSeq	ILMN_207449	ILMN_207449	MIF	NM_010798.2	NM_010798.2		17319	118130170	NM_010798.2	Mif	NP_034928.1	ILMN_2867835	004040093	S	479	GTAGTGTTCTGTGTTTATCCACCGGTAGCGATGCCCACCTTCCAGCCGGG	10	-	75322123-75322172	10qC1	Mus musculus macrophage migration inhibitory factor (Mif), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 30330] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: keto-phenylpyruvate = enol-phenylpyruvate [goid 50178] [evidence IEA]	Glif; MGC107654; GIF	Glif; MGC107654; GIF
Mus musculus	RefSeq	ILMN_221217	ILMN_221217	ITGA2B	NM_010575.1	NM_010575.1		16399	6754375	NM_010575.1	Itga2b	NP_034705.1	ILMN_2911123	006590433	S	2960	GGTGCAGACACAGCTGCTTCGGGCCTTGGAGGAGAGGGCCATTCCTGTCT	11	-	102316945-102316994	11qE1	Mus musculus integrin alpha 2b (Itga2b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a component of the extracellular matrix [goid 50840] [evidence IMP]	CD41B; AI172977; alphaIIb; GpIIb; CD41	CD41B; AI172977; alphaIIb; GpIIb; CD41
Mus musculus	RefSeq	ILMN_221217	ILMN_221217	ITGA2B	NM_010575.1	NM_010575.1		16399	6754375	NM_010575.1	Itga2b	NP_034705.1	ILMN_2732623	006520221	S	2513	CAGACTTCTCATCCACATTCCTGGCCAGTCCCAGCCCTCGGATCTGCTCT	11	-	102318557-102318606	11qE1	Mus musculus integrin alpha 2b (Itga2b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a component of the extracellular matrix [goid 50840] [evidence IMP]	CD41B; AI172977; alphaIIb; GpIIb; CD41	CD41B; AI172977; alphaIIb; GpIIb; CD41
Mus musculus	Riken	ILMN_206643	ILMN_206643	TLE1	ri|4930430G18|PX00314C09|AK076750|1480					AK076750	Tle1		ILMN_1255037	004880243	S	1	TCAGAAGGGAGCGCGCCGGGGGCACCGGGTGGAGGGCCACCGGAGGTCCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]		
Mus musculus	RefSeq	ILMN_216392	ILMN_216392	SLC25A27	NM_028711.1	NM_028711.1		74011	21312005	NM_028711.1	Slc25a27	NP_082987.1	ILMN_2858938	006420017	S	2262	GACCACTCAGGCCCAAGGTAGATCTCAGAGCCAACCGAATAGCTGCTCTG	17	-	43105330-43105379	17qB3	Mus musculus solute carrier family 25, member 27 (Slc25a27), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Ucp4; D530043E16Rik; 9430092A03Rik; 3632410G24Rik	Ucp4; D530043E16Rik; 9430092A03Rik; 3632410G24Rik
Mus musculus	RefSeq	ILMN_224303	ILMN_228289	RNF5	NM_019403.3	NM_019403.3		54197	118130759	NM_019403.3	Rnf5	NP_062276.1	ILMN_3161066	002450224	S	672	CAGTATTGGGAGTCCTGTGCTGGCCTTTCCTTGCTTTTGGACCACCCCCT	17	-	34738947-34738948:34739030-34739077	17qB1	Mus musculus ring finger protein 5 (Rnf5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA407576; 2410131O05Rik; NG2	AA407576; 2410131O05Rik; NG2
Mus musculus	Riken	ILMN_207134	ILMN_207134	NCOA1	ri|F730003F10|PL00002J06|AK089302|2823					AK089302	Ncoa1		ILMN_2585292	000050070	S	2451	GCGCTGGCAAGCTTCTTGGTTCTCAGTACCTGGGTCCTCTGGAGGGTGAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_193357	ILMN_246715	KIF13B	NM_001081177.1	NM_001081177.1		16554	124487162	NM_001081177.1	Kif13b	NP_001074646.1	ILMN_2695990	001410576	S	1639	CCATCCAGCTGCACCATGGGGACAGGATACTGTGGGGAAACAACCATTTC	14	+	65363745-65363794	14qD1	Mus musculus kinesin family member 13B (Kif13b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	C130021D12Rik; 5330429L19Rik; AI429803; GAKIN; 6030414C01	C130021D12Rik; 5330429L19Rik; AI429803; GAKIN; 6030414C01
Mus musculus	MEEBO	ILMN_192097	ILMN_192097	CASK	scl0002948.1_113				22203756	NM_146233	Cask		ILMN_2774872	004010113	S	2354	CACTGCACACCAATTTTACAACAAAGATAACGGAACAGAGGAGGTCCCAC						The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214379	ILMN_214379	A230078I01RIK	scl53863.5.1_114	NM_177747.2			31343137	NM_177747.2	A230078I01Rik		ILMN_2647411	000110482	S	2254	GCACTATAACAACTACTCCTTATGTATTTCTCTAACAACCACAGAGAGCT										
Mus musculus	RefSeq	ILMN_211745	ILMN_312347	LOC546133	XR_030911.1	XR_030911.1		546133	149259979	XR_030911.1	LOC546133		ILMN_2700545	006520719	S	1281	TTAGTGATGAAAGCTATTACTGCATCAATGGTAATACATTTCTGGTTTAG	9	+	55367541-55367590	9qB	PREDICTED: Mus musculus similar to DnaJ (Hsp40) homolog, subfamily B, member 6 (LOC546133), misc RNA.					
Mus musculus	RefSeq	ILMN_193947	ILMN_234258	ILF3	NM_001042708.1	NM_001042708.1		16201	111607433	NM_001042708.1	Ilf3	NP_001036173.1	ILMN_2501919	007560152	S	2847	CTGACTCTTTCCTTGCCTTTTTACTGAGCATGTAAACCTCCGGGACGGCC	9	+	21205449-21205498	9qA3	Mus musculus interleukin enhancer binding factor 3 (Ilf3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	MPHOSPH4; NF90	MPHOSPH4; NF90
Mus musculus	RefSeq	ILMN_234258	ILMN_234258	ILF3	NM_001042708.1	NM_001042708.1		16201	111607433	NM_001042708.1	Ilf3	NP_001036173.1	ILMN_3115677	004180279	A	2239	GGTGCTGGATATGGAAGCTATGGGTACAGCAGCAATTCGGCCACAGCAGG	9	+	21204285-21204285:21204404-21204452	9qA3	Mus musculus interleukin enhancer binding factor 3 (Ilf3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	MPHOSPH4; NF90	MPHOSPH4; NF90
Mus musculus	MEEBO	ILMN_187039	ILMN_187039	4930528J18RIK	scl37471.3.136_28						4930528J18Rik		ILMN_2440641	003390201	S	19	AAACCAATCCTACCAGGATAACAACAGTTGAGTGGAGCTTGAGTGCCCGA										
Mus musculus	RefSeq	ILMN_197456	ILMN_246233	6330416L11RIK	XM_986046.1	XM_986046.1		70713	94397036	XM_986046.1	6330416L11Rik	XP_991140.1	ILMN_1213770	003940047	S	520	GACAAGAACAACTCTGCATTCTAGCCCTCCCATCGAACCAGGGATCTGGC	14	+	45898765-45898814	14qC1	PREDICTED: Mus musculus RIKEN cDNA 6330416L11 gene (6330416L11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_249698	ILMN_249698	OLFR479	NM_001011742.1	NM_001011742.1		257891	58801277	NM_001011742.1	Olfr479	NP_001011742.1	ILMN_3162046	004730279	S	684	TGTACAGGGGAGGCATAAGGCTTTCTCAACGTGCTCCTCCCACCTCACAG	7	+	115199181-115199230	7qE3	Mus musculus olfactory receptor 479 (Olfr479), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR267-15	MOR267-15
Mus musculus	RefSeq	ILMN_209275	ILMN_209275	4921537P18RIK	NM_026256.2	NM_026256.2		70952	142374195	NM_026256.2	4921537P18Rik	NP_080532.1	ILMN_1216238	006940102	S	1304	GGTGGTAACTACTTTGATGTCCTAGGCAAATGTGTCAAAATATGGAGCCC	8	+	28574448-28574497	8qA2	Mus musculus RIKEN cDNA 4921537P18 gene (4921537P18Rik), transcript variant 1, mRNA.				Gsarp1; 4930456F22Rik	Gsarp1; 4930456F22Rik
Mus musculus	RefSeq	ILMN_212666	ILMN_212666	APH1C	NM_026674.3	NM_026674.3		68318	118129861	NM_026674.3	Aph1c	NP_080950.1	ILMN_1228777	005670041	S	5103	CCATATAAACTTTCTGTGTTGTATCCACGTTTAAATGTCTGATGGTGGCC	9	-	66662833-66662882	9qC	Mus musculus anterior pharynx defective 1c homolog (C. elegans) (Aph1c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence ISA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	APH-1b; Aph1b; 0610008A10Rik	APH-1b; Aph1b; 0610008A10Rik
Mus musculus	RefSeq	ILMN_215022	ILMN_215022	OLFR126	NM_146890.2	NM_146890.2		258892	112982876	NM_146890.2	Olfr126	NP_667101.1	ILMN_1238397	004150343	S	887	CCTTGAAAAGAGCACTAAAGAAGTTACTGCTAAGTGAAGAATTCATTAGG	17	+	37988425-37988474	17qB1	Mus musculus olfactory receptor 126 (Olfr126), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR218-1	MOR218-1
Mus musculus	RefSeq	ILMN_221397	ILMN_221397	CCDC155	NM_201374.1	NM_201374.1		384619	41235780	NM_201374.1	Ccdc155	NP_958762.1	ILMN_1227083	007320632	S	2147	CCACCACTATACCTCCTCCGTCAGCATGGGACCCACATCCCTAAGTTGTG	7	-	52439059-52439108	7qB4	Mus musculus coiled-coil domain containing 155 (Ccdc155), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm1434; MGC60968	Gm1434; MGC60968
Mus musculus	RefSeq	ILMN_200619	ILMN_200619	LOC384421	XM_357639.1	XM_357639.1			38084378	XM_357639.1	LOC384421		ILMN_1259405	000380377	S	16	CTACTCACTATTGTAGATACCTGTGGGGACATTGTGATGACCCAGTCTCC										
Mus musculus	RefSeq	ILMN_209575	ILMN_209575	4632417N05RIK	NM_028725.1	NM_028725.1		74032	21311980	NM_028725.1	4632417N05Rik	NP_083001.1	ILMN_2886896	005420332	S	2543	CCTGAAAAGCTGAGGTGACTGGTGGTTTCTGGGGAGCGGGAGACACTTTC	8	-	120547618-120547667	8qE1	Mus musculus RIKEN cDNA 4632417N05 gene (4632417N05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI117603	AI117603
Mus musculus	RefSeq	ILMN_210244	ILMN_313623	LOC100044324	XM_001471971.1	XM_001471971.1		100044324	149249333	XM_001471971.1	LOC100044324	XP_001472021.1	ILMN_2603660	006980192	S	132	CCAGGACCTGCGGTTTCCCAGGATTGCCTTCTTCAGTACCCGCCTGATTC					PREDICTED: Mus musculus similar to euchromatic histone methyltransferase 1 (LOC100044324), mRNA.					
Mus musculus	RefSeq	ILMN_210244	ILMN_313623	LOC100044324	XM_001471971.1	XM_001471971.1		100044324	149249333	XM_001471971.1	LOC100044324	XP_001472021.1	ILMN_2683675	005900286	S	1254	GCTGAATAAATTTGCCATCACCTTTTGTGTGGTGGCCGGGCAGGTCATGT					PREDICTED: Mus musculus similar to euchromatic histone methyltransferase 1 (LOC100044324), mRNA.					
Mus musculus	RefSeq	ILMN_245181	ILMN_245181	TTC30A2	NM_001081228.1	NM_001081228.1		620631	124487006	NM_001081228.1	Ttc30a2	NP_001074697.1	ILMN_3014466	005490692	I	511	GGGACACTATGAAGCTGCCTGCTCCAAATTCTTTGCGGCTTTGCAGGCTT	2	-	75815676-75815725	2qC3	Mus musculus tetratricopeptide repeat domain 30A2 (Ttc30a2), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	OTTMUSG00000015167	OTTMUSG00000015167
Mus musculus	RefSeq	ILMN_212676	ILMN_212676	ATCAY	NM_178662.3	NM_178662.3		16467	142372103	NM_178662.3	Atcay	NP_848777.1	ILMN_2629103	005340240	S	3353	GGGCCACTGAAGACCCCCCAAACAGGAGACCCCGAGGGGCTTAATATTCT	10	-	80667532-80667581	10qC1	Mus musculus ataxia, cerebellar, Cayman type homolog (human) (Atcay), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		CLAC; 3322401A10Rik; BNIP-H; BB077577; hes; ji	CLAC; 3322401A10Rik; BNIP-H; BB077577; hes; ji
Mus musculus	RefSeq	ILMN_220769	ILMN_220769	MS4A5	NM_183190.2	NM_183190.2		269063	110625823	NM_183190.2	Ms4a5	NP_899013.1	ILMN_2726615	002750201	S	574	CAGTTCTGGGATGCTACACAGAAGGAAGGGGATGCTGTTGAATAGTACTG	19	-	11348677-11348686:11348687-11348726	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 5 (Ms4a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC58438	MGC58438
Mus musculus	RefSeq	ILMN_213394	ILMN_213394	SLC10A6	NM_029415.2	NM_029415.2		75750	141802045	NM_029415.2	Slc10a6	NP_083691.1	ILMN_2636624	004060100	S	1575	ATTATGTGTGTAATGCAAGCGGGCTAGCTCTTTCTCTTGAGAGGGACAGG	5	-	104035229-104035278	5qE5	Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 6 (Slc10a6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	MGC149979; 8430417G17Rik; Soat; C78479	MGC149979; 8430417G17Rik; Soat; C78479
Mus musculus	RefSeq	ILMN_219004	ILMN_219004	INCENP	NM_016692.1	NM_016692.1		16319	7710039	NM_016692.1	Incenp	NP_057901.1	ILMN_1216213	000630634	S	2777	ATCTAGCCTGAAGAGTCCATGAGGCAGGCCCTCAGTCATTTTGGAGCACA	19	-	9947113-9947162	19qA	Mus musculus inner centromere protein (Incenp), mRNA.	A structural unit of the synaptonemal complex found between the lateral elements [goid 801] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]		AU019509; C77457; 2700067E22Rik; C130081E20	AU019509; C77457; 2700067E22Rik; C130081E20
Mus musculus	Riken	ILMN_205879	ILMN_205879	4632408O18RIK	ri|4632408O18|PX00012D02|AK028504|2969					AK028504	4632408O18Rik		ILMN_1239169	001780239	S	2882	ACCTGCTGACTGCTAAGTCTGGCCTGCTCTGTTTGGGGGTGGAGGCTGTT										
Mus musculus	RefSeq	ILMN_201355	ILMN_201355	LOC382515	XM_356545.1	XM_356545.1			38091613	XM_356545.1	LOC382515		ILMN_1249715	005900167	S	374	GTGCACATTCTGAAGACATCGGACAAGGGGCAGCATACTTCTTAACAGGG										
Mus musculus	RefSeq	ILMN_222144	ILMN_222144	MRPL2	NM_025302.3	NM_025302.3		27398	118130368	NM_025302.3	Mrpl2	NP_079578.1	ILMN_2842366	003180189	S	916	TCGGCCACTACCACCCATGAAGAGTTATGTGAAGCTGCCCTCCGCTGCTG	17	+	46786985-46787034	17qC	Mus musculus mitochondrial ribosomal protein L2 (Mrpl2), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	CGI-22; Rpml14; MRP-L14	CGI-22; Rpml14; MRP-L14
Mus musculus	RefSeq	ILMN_219659	ILMN_219659	IFNB1	NM_010510.1	NM_010510.1		15977	6754303	NM_010510.1	Ifnb1	NP_034640.1	ILMN_2711910	006280592	S	607	GCAGGCAACCTTTAAGCATCAGAGGCGGACTCTGGGACTGGTAGTGAATC	4	-	88168042-88168091	4qC4	Mus musculus interferon beta 1, fibroblast (Ifnb1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]	 [goid 5126] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	Ifb; IFNB	Ifb; IFNB
Mus musculus	MEEBO	ILMN_217763	ILMN_217763	PSEN1	scl0019164.2_326	NM_008943.1			6679492	NM_008943.1	Psen1		ILMN_2687249	003060014	S	2955	CCACTGCCAAAGGCAGAATTTAAACTAGGGGCTGAAGGATAGCTCCGAGT						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43227] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Any process that modulates the establishment or extent of a resting potential, the electrical charge across the plasma membrane, with the interior of the cell negative with respect to the exterior. The resting potential is the membrane potential of a cell that is not stimulated to be depolarized or hyperpolarized [goid 60075] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IMP]; Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51966] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response [goid 2286] [evidence IGI]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; The process whereby precursor cell type acquires the specialized features of a hemopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells [goid 2244] [evidence IGI]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage [goid 2573] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence ISO]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IMP]; The process whereby a neuroblast acquires specialized structural and/or functional features of a Cajal-Retzius cell, one of a transient population of pioneering neurons in the cerebral cortex. These cells are slender bipolar cells of the developing marginal zone. One feature of these cells in mammals is that they express the Reelin gene [goid 21870] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings [goid 51563] [evidence IGI]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IGI]; The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis [goid 35282] [evidence IMP]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IMP]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IGI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein binding [goid 43393] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IMP]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IGI]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IGI]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IGI]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IGI]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; The process by which synaptic vesicles are directed to specific destination membranes, mediated by molecules at the vesicle membrane and target membrane surfaces [goid 16080] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IMP]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IGI]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IMP]; The directed movement of choline into, out of, within or between cells. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 15871] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IGI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IPI]		
Mus musculus	MEEBO	ILMN_217763	ILMN_217763	PSEN1	scl0019164.2_326	NM_008943.1			6679492	NM_008943.1	Psen1		ILMN_1214811	003390075	S	1806	TCACCTTCGGGCTCGTGTTCTACTTCGCCACGGATTACCTTGTGCAGCCC						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43227] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Any process that modulates the establishment or extent of a resting potential, the electrical charge across the plasma membrane, with the interior of the cell negative with respect to the exterior. The resting potential is the membrane potential of a cell that is not stimulated to be depolarized or hyperpolarized [goid 60075] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IMP]; Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51966] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response [goid 2286] [evidence IGI]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; The process whereby precursor cell type acquires the specialized features of a hemopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells [goid 2244] [evidence IGI]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage [goid 2573] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence ISO]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IMP]; The process whereby a neuroblast acquires specialized structural and/or functional features of a Cajal-Retzius cell, one of a transient population of pioneering neurons in the cerebral cortex. These cells are slender bipolar cells of the developing marginal zone. One feature of these cells in mammals is that they express the Reelin gene [goid 21870] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings [goid 51563] [evidence IGI]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IGI]; The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis [goid 35282] [evidence IMP]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IMP]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IGI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein binding [goid 43393] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IMP]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IGI]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IGI]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IGI]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IGI]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; The process by which synaptic vesicles are directed to specific destination membranes, mediated by molecules at the vesicle membrane and target membrane surfaces [goid 16080] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IMP]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IGI]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IMP]; The directed movement of choline into, out of, within or between cells. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 15871] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IGI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IPI]		
Mus musculus	MEEBO	ILMN_223974	ILMN_223974	CRYGD	scl012967.1_46				6681038	NM_007776	Crygd		ILMN_2772482	004590376	S	307	CCAGATGATAGAGTTCACGGAGGACTGCCCCTCTCTCCAGGACCGATTCC							The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]		
Mus musculus	Riken	ILMN_202765	ILMN_202765	B230118H11RIK	ri|B230118H11|PX00068L20|AK020981|1066					AK020981	B230118H11Rik		ILMN_2552119	004760347	S	952	CAAGTAACACTGGCATCAATGGGCTTGTTAACTGTCTGTTAGCTAGGCTC										
Mus musculus	Riken	ILMN_204851	ILMN_204851	SH2D2A	ri|A130052G10|PX00123P22|AK037818|1874					AK037818	Sh2d2a		ILMN_1239066	001260121	S	1568	GGCCAGACCAGCCACAGACAGCAGGGTAACGAGAGGCAGTCAAATTAAGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence ISS]		
Mus musculus	RefSeq	ILMN_213103	ILMN_213103	TMEM62	NM_175285.3	NM_175285.3		96957	47271525	NM_175285.3	Tmem62	NP_780494.1	ILMN_2633670	002470301	S	2255	GCCAGTATCAGTGGGTGAGCTTCAGGAAGCAGTCACTCCTTGGACATCTG	2	+	120832967-120833016	2qE5	Mus musculus transmembrane protein 62 (Tmem62), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	C77355; B830009D23Rik	C77355; B830009D23Rik
Mus musculus	MEEBO	ILMN_223071	ILMN_223071	CPE	scl34760.11.1_14	NM_013494.2			22203762	NM_013494.2	Cpe		ILMN_1228232	003390243	S	1354	ACAGCCTCCGCTCCTGGCTACCTGGCAATCACAAAGAAAGTGGCAGTTCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The formation of mature insulin by proteolysis of the precursor preproinsulin. The signal sequence is first cleaved from preproinsulin to form proinsulin; proinsulin is then cleaved to release the C peptide, leaving the A and B chains of mature insulin linked by disulfide bridges [goid 30070] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IMP]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200184	ILMN_200184	LOC385878	XM_358982.1	XM_358982.1			38080838	XM_358982.1	LOC385878		ILMN_1214234	000050392	S	1839	GCCACACCTCCTAATGCCACATCCTATGAGACCACATGTTGAACTCTCAG										
Mus musculus	Riken	ILMN_204110	ILMN_204110	A830011N22RIK	ri|A830011N22|PX00153N01|AK043604|890					AK043604	A830011N22Rik		ILMN_1245201	003390239	S	745	GGTAGGGACCATGGCATTATGGAAACTGGTGAAATCGTGCCCGGAGGATG										
Mus musculus	RefSeq	ILMN_214672	ILMN_225605	OLFR659	NM_147050.1	NM_147050.1		259052	22128854	NM_147050.1	Olfr659	NP_667261.1	ILMN_1231113	004180341	S	588	GGTCAACATTGTCTATGGTCTGATGATTGCTCTCTTTATTGGGGGCTTTG	7	+	111819805-111819854	7qE3	Mus musculus olfactory receptor 659 (Olfr659), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR34-4	MOR34-4
Mus musculus	RefSeq	ILMN_220188	ILMN_220188	4632417K18RIK	NM_026640.2	NM_026640.2		107373	142360571	NM_026640.2	4632417K18Rik	NP_080916.1	ILMN_2718843	001780279	S	3058	CTTATTTTCCAGACACCTCCTAGTCCTATTGTGAGATATTTTGTGTCCCC	19	+	12664045-12664094	19qA	Mus musculus RIKEN cDNA 4632417K18 gene (4632417K18Rik), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	AW413625	AW413625
Mus musculus	RefSeq	ILMN_210755	ILMN_210755	CBR3	NM_173047.2	NM_173047.2		109857	31982073	NM_173047.2	Cbr3	NP_766635.1	ILMN_2896768	006960441	S	919	TAGTCCGTGACAAAGTTGTGCAAACTTGGTGAACGTCTGCTCTGGGGCTT	16	+	93690988-93691009:93691010-93691037	16qC4	Mus musculus carbonyl reductase 3 (Cbr3), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: R-CHOH-R' + NADP+ = R-CO-R' + NADPH + H+ [goid 4090] [evidence IEA]	1110001J05Rik; C81353; MGC99956	1110001J05Rik; C81353; MGC99956
Mus musculus	RefSeq	ILMN_210755	ILMN_210755	CBR3	NM_173047.2	NM_173047.2		109857	31982073	NM_173047.2	Cbr3	NP_766635.1	ILMN_2608811	002230411	S	607	CCGAGGTGGACCTGGTCGACCTCATGAAAAAGTTTGTGGAGGATACAAAA	16	+	93690676-93690725	16qC4	Mus musculus carbonyl reductase 3 (Cbr3), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: R-CHOH-R' + NADP+ = R-CO-R' + NADPH + H+ [goid 4090] [evidence IEA]	1110001J05Rik; C81353; MGC99956	1110001J05Rik; C81353; MGC99956
Mus musculus	RefSeq	ILMN_198641	ILMN_244219	GM379	XM_908711.1	XM_908711.1		236954	83002899	XM_908711.1	Gm379	XP_913804.1	ILMN_1247074	004560520	S	510	CCAGGAAGAGGACCTGGAGAAACTGGTGGCTAACCCTGTGCCTCCTCAAA				XqD	PREDICTED: Mus musculus gene model 379, (NCBI) (Gm379), mRNA.					
Mus musculus	RefSeq	ILMN_218701	ILMN_218701	PDE4DIP	NM_177145.3	NM_177145.3		83679	86476086	NM_177145.3	Pde4dip	NP_796119.1	ILMN_2725994	006060044	S	1189	GATCTGTTTTCGGTAGAATGGAAAAAAGGGGTACCCATGGAACGGTGGAG	3	-	97627626-97627675	3qF2.2	Mus musculus phosphodiesterase 4D interacting protein (myomegalin) (Pde4dip), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C87016; D130016K21Rik; 4732458A06Rik; KIAA0477; 9430063L05Rik; Usmg4; D3Bwg1078e; mKIAA0454	C87016; D130016K21Rik; 4732458A06Rik; KIAA0477; 9430063L05Rik; Usmg4; D3Bwg1078e; mKIAA0454
Mus musculus	RefSeq	ILMN_218701	ILMN_218701	PDE4DIP	NM_177145.3	NM_177145.3		83679	86476086	NM_177145.3	Pde4dip	NP_796119.1	ILMN_1218906	004070521	S	1416	GGGGTCTAAGCAAGAGGTCTGAAGTATGCGTGTGTCTAGTGTTGGTTGCC	3	-	97627399-97627448	3qF2.2	Mus musculus phosphodiesterase 4D interacting protein (myomegalin) (Pde4dip), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C87016; D130016K21Rik; 4732458A06Rik; KIAA0477; 9430063L05Rik; Usmg4; D3Bwg1078e; mKIAA0454	C87016; D130016K21Rik; 4732458A06Rik; KIAA0477; 9430063L05Rik; Usmg4; D3Bwg1078e; mKIAA0454
Mus musculus	MEEBO	ILMN_223640	ILMN_223640	C430017H16RIK	scl0214804.7_14	XM_143616.3			38077262	XM_143616.3	C430017H16Rik		ILMN_2766942	006590681	S	3516	TTGAGGCGAAAGAAAGAGCGGCCGTGTGTGTTAAACCTGAGCGGTCCGGA										
Mus musculus	RefSeq	ILMN_190806	ILMN_244321	INTS10	NM_027590.3	NM_027590.3		70885	146141117	NM_027590.3	Ints10	NP_081866.1	ILMN_2649174	005340598	S	2113	GTCTCCCGCTGTGGTGAGAACCTGATGGCGGTACTACATCGCTTCTGCAT				8qB3.3	Mus musculus integrator complex subunit 10 (Ints10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			4921521J11Rik; AI462004	4921521J11Rik; AI462004
Mus musculus	RefSeq	ILMN_190772	ILMN_256132	ZFP593	NM_024215.2	NM_024215.2		68040	154759287	NM_024215.2	Zfp593	NP_077177.2	ILMN_2703621	006560725	S	1797	GCCACTTGACCATTGAGGTTCTGTAAATTCAACTACCTTGGTGGGAGGGT				4qD3	Mus musculus zinc finger protein 593 (Zfp593), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	3110024A21Rik; RP23-354H24.5; E130106C14Rik; ZNF593; AV062409	3110024A21Rik; RP23-354H24.5; E130106C14Rik; ZNF593; AV062409
Mus musculus	RefSeq	ILMN_223283	ILMN_223283	BATF	NM_016767.2	NM_016767.2		53314	118131194	NM_016767.2	Batf	NP_058047.1	ILMN_2761900	000160035	S	285	AGGAGAGAGAAGAATCGCATCGCTGCCCAGAAGAGCCGACAGAGACAGAC	12	+	87030248-87030297	12qD2	Mus musculus basic leucine zipper transcription factor, ATF-like (Batf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	B-ATF; SFA-2	B-ATF; SFA-2
Mus musculus	Riken	ILMN_206363	ILMN_206363	D130027H15RIK	ri|D130027H15|PX00183M16|AK083864|2229					AK083864	D130027H15Rik		ILMN_2579546	006180070	S	2163	CTTCTGCTTGTGCGTCAGGCACTTTTCTAACCGAGCCATCTCCCCAGCTC										
Mus musculus	RefSeq	ILMN_220986	ILMN_220986	ARHGDIG	NM_008113.3	NM_008113.3		14570	118130965	NM_008113.3	Arhgdig	NP_032139.1	ILMN_2950622	004570239	S	635	TTGTCAGTGGCCTCAAATGTCTGCATCACACCTATCGTCGGGGACTGCGT	17	-	26337272-26337321	17qA3.3	Mus musculus Rho GDP dissociation inhibitor (GDI) gamma (Arhgdig), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Prevents the dissociation of GDP from a GTPase, thereby preventing GTP from binding [goid 5092] [evidence IDA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IDA]	Rho-GDI-3; Gdi5; RIP2; Rho-GDI2	Rho-GDI-3; Gdi5; RIP2; Rho-GDI2
Mus musculus	RefSeq	ILMN_220986	ILMN_220986	ARHGDIG	NM_008113.3	NM_008113.3		14570	118130965	NM_008113.3	Arhgdig	NP_032139.1	ILMN_1240164	005860441	S	848	AGTGGCACCTCCATGTCTGCCAGGACTGGAAGGACTGAACCCCACTTGGG	17	-	26337158-26337207	17qA3.3	Mus musculus Rho GDP dissociation inhibitor (GDI) gamma (Arhgdig), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Prevents the dissociation of GDP from a GTPase, thereby preventing GTP from binding [goid 5092] [evidence IDA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IDA]	Rho-GDI-3; Gdi5; RIP2; Rho-GDI2	Rho-GDI-3; Gdi5; RIP2; Rho-GDI2
Mus musculus	RefSeq	ILMN_220339	ILMN_254848	RHOH	NM_001081105.1	NM_001081105.1		74734	124487388	NM_001081105.1	Rhoh	NP_001074574.1	ILMN_2720807	003800441	S	4580	CATCTGATATCCCATAGCTGCAGGCCTCTCCCCCTACTAGTCAAAGGGCT	5	+	66282260-66282309	5qC3.1	Mus musculus ras homolog gene family, member H (Rhoh), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Arhh; 5830400A04Rik; AU019774	Arhh; 5830400A04Rik; AU019774
Mus musculus	RefSeq	ILMN_212130	ILMN_254848	RHOH	NM_001081105.1	NM_001081105.1		74734	124487388	NM_001081105.1	Rhoh	NP_001074574.1	ILMN_2623090	005390446	S	1516	CCAACTATGCCATATTTAAATCCACATCTTATTTAAATAATAACCAAATA	5	+	66279196-66279217:66279218-66279245	5qC3.1	Mus musculus ras homolog gene family, member H (Rhoh), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Arhh; 5830400A04Rik; AU019774	Arhh; 5830400A04Rik; AU019774
Mus musculus	MEEBO	ILMN_184223	ILMN_184223	TSGA10	scl16854.21.1_194	XM_136734.4			38074247	XM_136734.4	Tsga10		ILMN_2416870	000610370	S	5	GAAGCGAGGAAACTGATACTAAACCTGGTTAATAAGACATGATGACACCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence ISA]		
Mus musculus	RefSeq	ILMN_194118	ILMN_247649	COL8A1	NM_007739.2	NM_007739.2		12837	110681715	NM_007739.2	Col8a1	NP_031765.2	ILMN_2503553	005490477	S	4992	GACCGGTAACTTGCTTGAGTTCCCATGAATAGATTTGAGACTGAATGGCA	16	-	57624437-57624486	16qC1.1	Mus musculus collagen, type VIII, alpha 1 (Col8a1), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IGI]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Col8a-1	Col8a-1
Mus musculus	Riken	ILMN_206828	ILMN_206828	E130006F23RIK	ri|E130006F23|PX00207M01|AK087395|831					AK087395	E130006F23Rik		ILMN_2582971	004640678	S	778	AGTTGTGTAAAAATTTCTCGATAGAAAAGGCTTAAGAAAAACTTCAAATC										
Mus musculus	RefSeq	ILMN_253248	ILMN_253248	EG432723	NM_001004168.1	NM_001004168.1		432723	51921334	NM_001004168.1	EG432723	NP_001004168.1	ILMN_2946134	006450121	S	2169	TCAGTCCATCAACTAGACACCATACATAGGCTGGTCCAAGGCCCCGGCAC	13	+	4835430-4835479	13qA1	Mus musculus predicted gene, EG432723 (EG432723), mRNA.					
Mus musculus	Riken	ILMN_204704	ILMN_204704	ROBO1	ri|A530006L21|PX00139F22|AK040651|2419					AK040651	Robo1		ILMN_1238428	006250056	S	1972	CAGGCCACATGAACTGAATAGCTGTGGTCCGTGGTGTATAACAGAAGGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]	Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200299	ILMN_200299	LOC386168	XM_359103.1	XM_359103.1			38081256	XM_359103.1	LOC386168		ILMN_2538277	007650180	S	1761	TCCAGAAGATGTCCCAACCGCCGAATGGATGGACCTGGAGGGCATCATCC										
Mus musculus	RefSeq	ILMN_214843	ILMN_214843	PRAMEL3	NM_031390.1	NM_031390.1		83565	13878222	NM_031390.1	Pramel3	NP_113567.1	ILMN_2652587	006060193	S	3634	TTATAATGCTTTCTTGTTAACATCACATTATTTTGTCATCTTTGAGTAAG	X	+	131847136-131847175	XqF1	Mus musculus preferentially expressed antigen in melanoma-like 3 (Pramel3), mRNA.					
Mus musculus	RefSeq	ILMN_218706	ILMN_214843	PRAMEL3	NM_031390.1	NM_031390.1		83565	13878222	NM_031390.1	Pramel3	NP_113567.1	ILMN_2699185	006040711	S	3217	ATTTAAAAATCTAATAAGAAAACCAGAAGCAACAGTGTGTCTATATTGCT	X	+	131846719-131846768	XqF1	Mus musculus preferentially expressed antigen in melanoma-like 3 (Pramel3), mRNA.					
Mus musculus	RefSeq	ILMN_218706	ILMN_214843	PRAMEL3	NM_031390.1	NM_031390.1		83565	13878222	NM_031390.1	Pramel3	NP_113567.1	ILMN_2720883	001820292	S	3345	CTCACATGTCAAGATGATACTGAACTATACTGTAGAGATACAGAGCACTA	X	+	131846847-131846896	XqF1	Mus musculus preferentially expressed antigen in melanoma-like 3 (Pramel3), mRNA.					
Mus musculus	MEEBO	ILMN_186612	ILMN_186612	IGHV1S36_M13788_IG_HEAVY_VARIABLE_1S36_40	IGHV1S36_M13788_Ig_heavy_variable_1S36_40						IGHV1S36_M13788_Ig_heavy_variable_1S36_40		ILMN_2437019	001510768	S	17	TTCTTGGCAGCAACAGCTACAGGTGTCCACTCCCCGGTCCAACTGCAGCA										
Mus musculus	MEEBO	ILMN_189632	ILMN_189632	SCL000159.1_41	scl000159.1_41	XM_133445.3			38086611	XM_133445.3	scl000159.1_41		ILMN_2499352	005910209	S	15	GTGCAGGCCAACACTGCAGGCATCCCTGGTTAACCTGAGTGCAGCAAAAG										
Mus musculus	MEEBO	ILMN_216084	ILMN_216084	HBP1	scl42553.13_222				23397422	NM_153198	Hbp1		ILMN_1220230	002970139	S	2316	CGCGTTCCTGTCTCCTCAGCCACATACCCTACATCTGTGCTGTCAGTGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_216084	ILMN_216084	HBP1	scl42553.13_222				23397422	NM_153198	Hbp1		ILMN_2773012	005690019	S	2306	TGTGTTTGACCGCGTTCCTGTCTCCTCAGCCACATACCCTACATCTGTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197009	ILMN_197009	EG226472	XM_136255.4	XM_136255.4		226472	82882852	XM_136255.4	EG226472	XP_136255.4	ILMN_1213209	006380253	S	361	CTGAAGGCAGAATACTTGGTGCAGCTCTCCTCACAGTTCCTGGGCAAGCG	1	-	143153325-143153374	1qF	PREDICTED: Mus musculus predicted gene, EG226472 (EG226472), mRNA.					
Mus musculus	RefSeq	ILMN_215100	ILMN_240728	SMOK4A	XM_912174.2	XM_912174.2		272667	94411072	XM_912174.2	Smok4a	XP_917267.1	ILMN_2655534	007100369	S	1977	AGGAGAAAGAGCATCTGGCACGGCCCAGAAGATCACCAGAGGATGCCGGA				17qA1	PREDICTED: Mus musculus sperm motility kinase 4A (Smok4a), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220911	ILMN_220911	GIT2	NM_019834.3	NM_019834.3		26431	116517296	NM_019834.3	Git2	NP_062808.3	ILMN_1251129	003450372	S	4674	TCCAGTGTTGCGTGCACTCGGGACTCTTAACGGCACAGCGCAGGGGCTCT	5	-	115177720-115177769	5qF	Mus musculus G protein-coupled receptor kinase-interactor 2 (Git2), transcript variant 1, mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0148; KIAA0148; B230104M05Rik; 5830420E16Rik; 9630056M03Rik; 1500036H07Rik	mKIAA0148; KIAA0148; B230104M05Rik; 5830420E16Rik; 9630056M03Rik; 1500036H07Rik
Mus musculus	RefSeq	ILMN_220911	ILMN_220911	GIT2	NM_019834.3	NM_019834.3		26431	116517296	NM_019834.3	Git2	NP_062808.3	ILMN_2728477	005890504	S	453	CAAGTATCAGATGTTAGCGTTCGTCCACCGATTGCCCTGCCGCGAGGACG	5	-	115216489-115216538	5qF	Mus musculus G protein-coupled receptor kinase-interactor 2 (Git2), transcript variant 1, mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0148; KIAA0148; B230104M05Rik; 5830420E16Rik; 9630056M03Rik; 1500036H07Rik	mKIAA0148; KIAA0148; B230104M05Rik; 5830420E16Rik; 9630056M03Rik; 1500036H07Rik
Mus musculus	RefSeq	ILMN_208968	ILMN_208968	PCDHA6	NM_007767.1	NM_007767.1		12937	6681022	NM_007767.1	Pcdha6	NP_031793.1	ILMN_3155884	001470673	A	264	CCGCATCGCGCAGGACCTGGGGCTGGAGCTGACGGAGCTGGTGCCCCGCC	18	+	37093868-37093917	18qB2-qB3	Mus musculus protocadherin alpha 6 (Pcdha6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CNR; Cnr2; Crnr2	CNR; Cnr2; Crnr2
Mus musculus	RefSeq	ILMN_208968	ILMN_208968	PCDHA6	NM_007767.1	NM_007767.1		12937	6681022	NM_007767.1	Pcdha6	NP_031793.1	ILMN_3076948	000430593	I	5016	CCCCCATATTTTGAAGGGTGTGTAACTTCAGCTCTGCAGGATTGCATGGG	18	+	37313280-37313329	18qB2-qB3	Mus musculus protocadherin alpha 6 (Pcdha6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CNR; Cnr2; Crnr2	CNR; Cnr2; Crnr2
Mus musculus	RefSeq	ILMN_210344	ILMN_210344	B230317C12RIK	NM_019833.1	NM_019833.1		56279	9790000	NM_019833.1	B230317C12Rik	NP_062807.1	ILMN_2815594	000990543	S	1270	CCTGGCCAAGGTGTGCGAGCTGCTAAGGGACTATCTGCTGCCTGGAGCTC	2	+	26458163-26458212	2qA3	Mus musculus RIKEN cDNA B230317C12 gene (B230317C12Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW209000; AB030186; PIP49	AW209000; AB030186; PIP49
Mus musculus	RefSeq	ILMN_194081	ILMN_194081	TRIM37	NM_197987.1	NM_197987.1		68729	37574063	NM_197987.1	Trim37	NP_932104.1	ILMN_1247915	006590735	S	5489	TTCTTCAGTAATCTTTGAGATGGACAAGTTGTGTATTGTTCCCACTTGGC	11	+	87034042-87034091	11qC	Mus musculus tripartite motif-containing 37 (Trim37), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TEF3; AU043018; mKIAA0898; AI848587; MUL; 1110032A10Rik; 2810004E07Rik	TEF3; AU043018; mKIAA0898; AI848587; MUL; 1110032A10Rik; 2810004E07Rik
Mus musculus	RefSeq	ILMN_210761	ILMN_210761	CCDC83	NM_029256.3	NM_029256.3		75338	146141207	NM_029256.3	Ccdc83	NP_083532.1	ILMN_1219556	004390095	S	1173	GGTATGGTCATGGAAGGACTTCTAGAGAAGGCCCTCTTCTCCTCTGTGCT				7qE1	Mus musculus coiled-coil domain containing 83 (Ccdc83), mRNA.				4930549K11Rik; 4930554C01Rik; 4932423M01Rik	4930549K11Rik; 4930554C01Rik; 4932423M01Rik
Mus musculus	RefSeq	ILMN_210761	ILMN_210761	CCDC83	NM_029256.3	NM_029256.3		75338	146141207	NM_029256.3	Ccdc83	NP_083532.1	ILMN_1245725	004280438	S	368	GAAAGAGAAGAATTTGGATGAGGCACCAATAGTAACAAGAGAGGAAGTGG				7qE1	Mus musculus coiled-coil domain containing 83 (Ccdc83), mRNA.				4930549K11Rik; 4930554C01Rik; 4932423M01Rik	4930549K11Rik; 4930554C01Rik; 4932423M01Rik
Mus musculus	RefSeq	ILMN_208716	ILMN_208716	NR1I3	NM_009803.2	NM_009803.2		12355	83921567	NM_009803.2	Nr1i3	NP_033933.2	ILMN_2926661	002900398	S	922	GGACGCAGTCCATGCAGGGTTCCAGTACGAGTTTTTGGAGTCGATCCTCC	1	+	173053884-173053896:173053989-173054025	1qH3	Mus musculus nuclear receptor subfamily 1, group I, member 3 (Nr1i3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MB67; ESTM32; CAR; MGC107281; Care2; AI551208; CAR-beta; AA209988	MB67; ESTM32; CAR; MGC107281; Care2; AI551208; CAR-beta; AA209988
Mus musculus	MEEBO	ILMN_193236	ILMN_193236	2810011L19RIK	scl069952.2_312						2810011L19Rik		ILMN_1256221	003400767	S	9	GGGGGAAACTATTGGTGTCGCCAACTTCCTCGTGAGCCCGTGTGTAATTG										
Mus musculus	RefSeq	ILMN_223550	ILMN_223550	MNX1	NM_019944.1	NM_019944.1		15285	9910267	NM_019944.1	Mnx1	NP_064328.1	ILMN_2827236	006110703	S	1370	CAAGACTAGGCGGGCCTGGACACCAACCTCTGCCCCAGTAGTTGCCTCCA	5	-	29800399-29800408:29800409-29800448	5qB1	Mus musculus motor neuron and pancreas homeobox 1 (Mnx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	HB9; MNR2	HB9; MNR2
Mus musculus	RefSeq	ILMN_223550	ILMN_223550	MNX1	NM_019944.1	NM_019944.1		15285	9910267	NM_019944.1	Mnx1	NP_064328.1	ILMN_2765641	002070647	S	1879	ATTGCTGAAAAAAATCTCAGAATGGTAGTGTATTTTTGTATATTGTATTT	5	-	29799890-29799939	5qB1	Mus musculus motor neuron and pancreas homeobox 1 (Mnx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	HB9; MNR2	HB9; MNR2
Mus musculus	RefSeq	ILMN_226390	ILMN_226390	PCDH7	NM_018764.1	NM_018764.1		54216	9055301	NM_018764.1	Pcdh7	NP_061234.1	ILMN_2881857	001170278	S	5361	GAGCACAGTAGTTTGAAGTCATGGGAACTGCTGTAGCCCATACAAGTCCC	5	+	58120534-58120583	5qC1	Mus musculus protocadherin 7 (Pcdh7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_191624	ILMN_226390	PCDH7	NM_018764.1	NM_018764.1		54216	9055301	NM_018764.1	Pcdh7	NP_061234.1	ILMN_1234105	001450403	S	4475	GGCTAGCAACCATTAACACTTGATAGGAAAAGCATTCGGAAGAAAACCCC	5	+	58119648-58119697	5qC1	Mus musculus protocadherin 7 (Pcdh7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_191624	ILMN_226390	PCDH7	NM_018764.1	NM_018764.1		54216	9055301	NM_018764.1	Pcdh7	NP_061234.1	ILMN_1256260	003610022	S	5212	CCCCCCATTACAATTTTCTCCAAGTTCCTAAGTACTGGATAAGAGTTCCA	5	+	58120385-58120434	5qC1	Mus musculus protocadherin 7 (Pcdh7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204269	ILMN_204269	9630001P16RIK	ri|9630001P16|PX00114N10|AK035758|1762					AK035758	9630001P16Rik		ILMN_1257999	004390437	S	1287	GTCACACCATTGATGATGAGTGTGAGCATGGGCCACCATCAGCCCAGACC										
Mus musculus	RefSeq	ILMN_197497	ILMN_197497	LOC278666	XM_204824.2	XM_204824.2			38076293	XM_204824.2	LOC278666		ILMN_1238869	003890296	S	113	GCTGGGAGCAGCCTTTGGCTCCATTTGTTTTGCAACCAGCATGGCCCAGA										
Mus musculus	RefSeq	ILMN_196751	ILMN_196751	H2-Q7	NM_010394.1	NM_010394.1			6754139	NM_010394.1	H2-Q7		ILMN_2651877	005360403	S	979	TGGCTTTTGTGATGAATAGGAGGTGAAACACAGGTGGACAAGGAGGGGAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]			
Mus musculus	Riken	ILMN_203697	ILMN_203697	9630013B04RIK	ri|9630013B04|PX00115C11|AK035876|3540					AK035876	9630013B04Rik		ILMN_1239521	007200113	S	3422	GAGCCCAGGAAGAGAGTAGGGATTGTAAGTGAGCCAGGAAGCCACTGAAG										
Mus musculus	RefSeq	ILMN_213135	ILMN_213135	CDC123	NM_133837.4	NM_133837.4		98828	146149222	NM_133837.4	Cdc123	NP_598598.1	ILMN_1224222	007560326	S	1162	GGCTTTTATATTCATGTGTATTTACCTGGAAAAAGAGGGAGGGCCTTTGG				2qA1	Mus musculus cell division cycle 123 homolog (S. cerevisiae) (Cdc123), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through G1 phase, one of two 'gap' phases in the mitotic cell cycle; G1 is the interval between the completion of mitosis and the beginning of DNA synthesis [goid 80] [evidence ISO]		G431001I09Rik; AA959893	G431001I09Rik; AA959893
Mus musculus	Riken	ILMN_205118	ILMN_205118	E130010D16RIK	ri|E130010D16|PX00208I13|AK053332|2008					AK053332	E130010D16Rik		ILMN_1223918	000650424	S	1761	TCTCCATGCTGCGCCCTGGGAGGGTATTTAAGGAGAGCAGTGTCACCCTG										
Mus musculus	RefSeq	ILMN_213340	ILMN_213340	FADD	NM_010175.2	NM_010175.2		14082	31542796	NM_010175.2	Fadd	NP_034305.1	ILMN_2665625	002340494	S	2808	CCTGAACACCTCAGCATCAATTCCTCCTGCTGCTAATAAGGGCTTGTCAG	7	-	144387726-144387775	7qF5	Mus musculus Fas (TNFRSF6)-associated via death domain (Fadd), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mort1/FADD	Mort1/FADD
Mus musculus	RefSeq	ILMN_213340	ILMN_213340	FADD	NM_010175.2	NM_010175.2		14082	31542796	NM_010175.2	Fadd	NP_034305.1	ILMN_2874409	003520059	S	2517	CCCGGCGTGTCACATTTTTTGTACAGCTCAGGAATCCAAAATGGCTCTCC	7	-	144388017-144388066	7qF5	Mus musculus Fas (TNFRSF6)-associated via death domain (Fadd), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mort1/FADD	Mort1/FADD
Mus musculus	RefSeq	ILMN_216223	ILMN_216223	2900009I07RIK	NM_026520.2	NM_026520.2		68034	31560149	NM_026520.2	2900009I07Rik	NP_080796.1	ILMN_2668661	005810687	S	1208	GACTTTTTATCAATAAGTGTGTTGAAGCATACATTTTACGCTGCTAATAT	19	-	24550707-24550756	19qB	Mus musculus RIKEN cDNA 2900009I07 gene (2900009I07Rik), mRNA.				2410124L17Rik	2410124L17Rik
Mus musculus	RefSeq	ILMN_218191	ILMN_218191	OLFR1454	NM_146692.1	NM_146692.1		258687	33239135	NM_146692.1	Olfr1454	NP_666903.1	ILMN_2947960	006290280	S	675	GTTGCAGTCAGCTGCAGGATATCGCAAAGCTTTCTTTACTTGTGCTTCAC	19	+	13138577-13138626	19qA	Mus musculus olfactory receptor 1454 (Olfr1454), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-14	MOR202-14
Mus musculus	RefSeq	ILMN_194476	ILMN_257918	CACYBP	NM_009786.1	NM_009786.1		12301	33468884	NM_009786.1	Cacybp	NP_033916.1	ILMN_2638958	000150367	S	1118	GCTGGGAGATAGAATACAGAAGTGTTTGTCTGTAGTTGACATTAGATCCC	1	-	162133330-162133379	1qH2.1	Mus musculus calcyclin binding protein (Cacybp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]			
Mus musculus	Riken	ILMN_206155	ILMN_206155	D030007L02RIK	ri|D030007L02|PX00178D16|AK083429|2668					AK083429	D030007L02Rik		ILMN_2577977	000240762	S	2615	GTCTAGGGTGACCGCATTTTGTTAGCATGCTCTATTAAACAGCTTTCCAG										
Mus musculus	RefSeq	ILMN_208767	ILMN_242792	TCTE3	NM_011560.3	NM_011560.3		21647	88758586	NM_011560.3	Tcte3	NP_035690.2	ILMN_2589325	004590193	S	575	ATAAATTCATTATACAAGTATTATTTATTCAAAAGACTGGTCAAGCAATA	17	-	15167475-15167524	17qA2	Mus musculus t-complex-associated testis expressed 3 (Tcte3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tctex-4; Tctex4; Tctex2; Tctex-2; D17Leh117c; Tcte-3; LC2	Tctex-4; Tctex4; Tctex2; Tctex-2; D17Leh117c; Tcte-3; LC2
Mus musculus	RefSeq	ILMN_199790	ILMN_255326	LOC637754	XM_913520.2	XM_913520.2		637754	94369361	XM_913520.2	LOC637754	XP_918613.1	ILMN_2536498	006510438	S	303	AAGCCATCAAACCCTGGAAACAATAAGACATTCATCATCGACCTCGTGGC					PREDICTED: Mus musculus similar to interleukin 21 (LOC637754), mRNA.					
Mus musculus	RefSeq	ILMN_217764	ILMN_217764	SEPW1	NM_009156.2	NM_009156.2		20364	110735412	NM_009156.2	Sepw1	NP_033182.1	ILMN_1252204	007400392	S	471	CCACCAAGTCAGGCCAGAGATGGATTCTGGCTGTGGGTGCCTCCCCAGAA	7	-	16502741-16502790	7qA2	Mus musculus selenoprotein W, muscle 1 (Sepw1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence TAS]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	selW	selW
Mus musculus	RefSeq	ILMN_222529	ILMN_237122	LOC630567	XM_904120.2	XM_904120.2		630567	94400796	XM_904120.2	LOC630567	XP_909213.2	ILMN_1218994	002680360	S	3578	TTTGGTCATGAGTAAGGACTATATTTATGTCACCACTATTGAATATATGT					PREDICTED: Mus musculus similar to putative serine/threonine protein kinase MAK-V (LOC630567), mRNA.					
Mus musculus	Riken	ILMN_202945	ILMN_202945	PRPH2	ri|A930021L14|PX00066B16|AK044549|1372					AK044549	Prph2		ILMN_1223554	005810343	S	1044	GCAGAGGGCAGGGGAAGGGAGCCTGCCAGACTTGGGTTTAACATGGTGAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199598	ILMN_199598	LOC383713	XM_357203.1	XM_357203.1			38074860	XM_357203.1	LOC383713		ILMN_2535799	000430113	S	132	TTGCTGCTTGGAAGAACCGTCGACCTCGCAGACAGGGACCGTTTCATGGC										
Mus musculus	Riken	ILMN_201758	ILMN_201758	ATP5K	ri|2610008D24|ZX00048E14|AK011342|201					AK011342	Atp5k		ILMN_1214830	002030762	S	91	GCATGGCATACGGCGCCAAGCGCTACACTCAAGATGACAGCATTCTCAAG						All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188919	ILMN_188919	4930523O13RIK	scl47234.9.1_14						4930523O13Rik		ILMN_2456844	006020390	S	11	GGAATAGTTATTTAATAGAAAGCAGAATATTTGTGACAACTGCCATTCCT										
Mus musculus	MEEBO	ILMN_218971	ILMN_218971	1700007N14RIK	scl074215.2_5	XM_135691.2			38088198	XM_135691.2	1700007N14Rik		ILMN_1220376	005390348	S	405	TTCAGATTAGCTGGAGGACATGTGCCAAGAGGGTGACTCAGCTCTCCAGG								Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214655	ILMN_214655	OLFR1040	NM_207561.2	NM_207561.2		404323	112807190	NM_207561.2	Olfr1040	NP_997444.2	ILMN_1237824	004480661	S	867	CTACAGCTTGAGAAATCAGGAGGTAAAAAGTGCCTTAAAGAGAATTACTG	2	-	85985973-85986022	2qD	Mus musculus olfactory receptor 1040 (Olfr1040), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR185-12	MOR185-12
Mus musculus	RefSeq	ILMN_201477	ILMN_201477	LOC385235	XM_358134.1	XM_358134.1			38094064	XM_358134.1	LOC385235		ILMN_1216653	006370670	S	268	GGAACGTTGAAAAAATCTGCTGTGCACTATGATCGCTGTGGACGAAAATA										
Mus musculus	RefSeq	ILMN_222279	ILMN_222279	IGSF1	NM_183335.1	NM_183335.1		209268	41282008	NM_183335.1	Igsf1	NP_899178.1	ILMN_1216133	000360209	S	2338	GCGTCCCGAAGAAAGATGACTCTTTCAGTATACTCCTTTGCCTGTTCCAG	X	-	47139651-47139700	XqA5	Mus musculus immunoglobulin superfamily, member 1 (Igsf1), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	InhBP/p120; 5530402E03; 5330413N23; AI747649; mKIAA0364	InhBP/p120; 5530402E03; 5330413N23; AI747649; mKIAA0364
Mus musculus	RefSeq	ILMN_196018	ILMN_196018	ZFP52	NM_144515.2	NM_144515.2		22710	122937376	NM_144515.2	Zfp52	NP_653098.2	ILMN_2838139	004900575	S	3109	CAGAGATCACTGTGAATCCAGTTCCAGGACTTCCCGAACTACATAGACCC	17	+	21699510-21699559	17qA3.2	Mus musculus zinc finger protein 52 (Zfp52), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfp-52; mszf34; mszf75; zfec29; Zfp76; mszf24; mszf23-2; KRAB11	Zfp-52; mszf34; mszf75; zfec29; Zfp76; mszf24; mszf23-2; KRAB11
Mus musculus	RefSeq	ILMN_221859	ILMN_221859	NRD1	NM_146150.2	NM_146150.2		230598	31559917	NM_146150.2	Nrd1	NP_666262.2	ILMN_1243112	004760736	S	3463	GGCCTTCACAGCAACACTCAGCCTCTTCCCCTACCATAAAATAGTCAAAT	4	+	108733684-108733733	4qC7	Mus musculus nardilysin, N-arginine dibasic convertase, NRD convertase 1 (Nrd1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI875733; NRD-C; MGC25477; 2600011I06Rik	AI875733; NRD-C; MGC25477; 2600011I06Rik
Mus musculus	RefSeq	ILMN_198974	ILMN_234394	LOC669365	XR_002486.1	XR_002486.1		669365	94386890	XR_002486.1	LOC669365		ILMN_1214900	007210286	S	1389	TCACAGGTGGATAAGCTGGATATTATCCTAACCACCCCGCCTCGATCCTG					PREDICTED: Mus musculus similar to K+ channel tetramerization protein (LOC669365), mRNA.					
Mus musculus	Riken	ILMN_206056	ILMN_206056	MME	ri|D230045D07|PX00190B23|AK052088|3545					AK052088	Mme		ILMN_1221141	005720431	S	3434	GCCAGTACCCAAGAGGTGGAGTGGATCAGGTGGCAAGCATCATTCTCAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210590	ILMN_313125	LOC100045306	XM_001474027.1	XM_001474027.1		100045306	149264487	XM_001474027.1	LOC100045306	XP_001474077.1	ILMN_2607177	004150110	S	740	TAAGAGAAAACTCGGTTTTATAGTTACATTTTCAGATGTTGTGTATAAGA					PREDICTED: Mus musculus similar to mediator of RNA polymerase II transcription, subunit 10 homolog (NUT2, S. cerevisiae) (LOC100045306), mRNA.					
Mus musculus	RefSeq	ILMN_223223	ILMN_223223	POLA1	NM_008892.1	NM_008892.1		18968	6679408	NM_008892.1	Pola1	NP_032918.1	ILMN_2761034	007040435	S	4594	AAAATACTTAACTTACCAAATAGTTTTTATAGCACTATGTACACCAAACC	X	-	90550808-90550857	XqC3	Mus musculus polymerase (DNA directed), alpha 1 (Pola1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which catalyzes the synthesis of an RNA primer on the lagging strand of replicating DNA; the smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis [goid 5658] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IDA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IDA]	AW321876; Pola	AW321876; Pola
Mus musculus	RefSeq	ILMN_221760	ILMN_314560	4930470H14RIK	XM_001474786.1	XM_001474786.1		75815	149268283	XM_001474786.1	4930470H14Rik	XP_001474836.1	ILMN_2739956	002060619	S	1549	GCTTTGGTGACGTGAGTGTAAATTTCGTGCTTCCTACGCTACAGTTTCTG	17	-	4044793-4044842	17qA1	PREDICTED: Mus musculus RIKEN cDNA 4930470H14 gene (4930470H14Rik), mRNA.					
Mus musculus	MEEBO	ILMN_193656	ILMN_193656	1700016L04RIK	scl0069412.1_112						1700016L04Rik		ILMN_2499229	005960021	S	7	GTTTCAGGTTTTTGGAACTATAGGACCTAACCCTGCAGCCAAATTGACAG										
Mus musculus	MEEBO	ILMN_221687	ILMN_221687	1700024P16RIK	scl25187.20.1_137	XM_161350.4			38078623	XM_161350.4	1700024P16Rik		ILMN_2739064	005050221	S	2814	TTTTCTAAACTCAACCAGAACTATTGTTTAGAAGTGTTTAAGTATATTTA										
Mus musculus	RefSeq	ILMN_201228	ILMN_241515	LOC620628	XM_987963.1	XM_987963.1		620628	94387463	XM_987963.1	LOC620628	XP_993057.1	ILMN_2541545	005820338	S	289	CGGAGAGTATTGTGGTCAGGATATTGGAGGTCCCATGAATCGCCAGTGGA					PREDICTED: Mus musculus similar to ribosomal protein L5 (LOC620628), mRNA.					
Mus musculus	RefSeq	ILMN_199315	ILMN_199315	LOC331243	XM_285618.2	XM_285618.2			38094371	XM_285618.2	LOC331243		ILMN_1253944	004230424	S	1253	GGATGAAGGACTACCAGCTCAATGCACTCCTACCTTCCCTCATACAATGC										
Mus musculus	RefSeq	ILMN_199614	ILMN_199614	LOC382796	XM_358729.1	XM_358729.1			38075092	XM_358729.1	LOC382796		ILMN_1232845	005720220	S	638	ACAACGCTGGGTCTCCCGGCACAGAAGAAAAACCTAGCACGGAACGAGCC										
Mus musculus	RefSeq	ILMN_213159	ILMN_213159	GDE1	NM_019580.4	NM_019580.4		56209	141802675	NM_019580.4	Gde1	NP_062526.1	ILMN_2676481	005270709	S	1007	AAGAATTACTACGAGTCCCACCTTGGGTCCAGCTACATCACTGACAGCAT	7	-	125832544-125832593	7qF2	Mus musculus glycerophosphodiester phosphodiesterase 1 (Gde1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: H2O + sn-glycero-3-phospho-1-inositol = glycerol-3-phosphate + inositol [goid 47395] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence ISS]	RGS16; 1200003M13Rik; GDE1	RGS16; 1200003M13Rik; GDE1
Mus musculus	RefSeq	ILMN_213159	ILMN_213159	GDE1	NM_019580.4	NM_019580.4		56209	141802675	NM_019580.4	Gde1	NP_062526.1	ILMN_2634264	005700639	S	668	CCACAGCTGTACAATAACAGTATGGTCTGCTCATTCTTGCCGGAAGTCAT	7	-	125838013-125838062	7qF2	Mus musculus glycerophosphodiester phosphodiesterase 1 (Gde1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: H2O + sn-glycero-3-phospho-1-inositol = glycerol-3-phosphate + inositol [goid 47395] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence ISS]	RGS16; 1200003M13Rik; GDE1	RGS16; 1200003M13Rik; GDE1
Mus musculus	RefSeq	ILMN_218009	ILMN_218009	ARHGAP18	NM_176837.2	NM_176837.2		73910	118130381	NM_176837.2	Arhgap18	NP_789807.1	ILMN_1248002	004610669	S	3217	AAGGGTAGAGTGTCACTGACGAAAGATGGCATGTGTGGATGAGCCACTGG	10	+	26638055-26638104	10qA4	Mus musculus Rho GTPase activating protein 18 (Arhgap18), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI314906; 4833419J07Rik; AI843501	AI314906; 4833419J07Rik; AI843501
Mus musculus	RefSeq	ILMN_236550	ILMN_236550	GM484	NM_001033356.2	NM_001033356.2		243967	125490393	NM_001033356.2	Gm484	NP_001028528.2	ILMN_2903169	006270192	S	1490	GTTGCCTACGTTGGGACCGGAAGTGACTGCTTGGACCTGTGAGCCTTATA	7	+	52949840-52949889	7qB4	Mus musculus gene model 484, (NCBI) (Gm484), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220251	ILMN_220251	CARTPT	NM_013732.4	NM_013732.4		27220	125628669	NM_013732.4	Cartpt	NP_038760.1	ILMN_3123063	004050706	A	359	AGGAAAGGGGCCAGGATCGGGAAGCTGTGTGACTGTCCCCGAGGAACTTC				13qD1	Mus musculus CART prepropeptide (Cartpt), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence TAS]; Any process that modulates the frequency, rate or extent of bone remodeling, the processes of bone formation and resorption that combine to maintain skeletal integrity [goid 46850] [evidence IMP]; A cellular homeostatic process involved in the maintenance of an internal equilibrium of glucose within a cell or between a cell and its external environment [goid 1678] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence TAS]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IDA]; Any process that reduces appetite [goid 32099] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment [goid 9267] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cart	Cart
Mus musculus	RefSeq	ILMN_207050	ILMN_249143	EG625540	XM_916210.2	XM_916210.2		625540	94375469	XM_916210.2	EG625540	XP_921303.1	ILMN_1232269	003520685	S	2314	GGACCCCATCGGCCCATATGCTTGAATGCTTGGTCCCTAGTTAGAGGAAC				5qG1.3	PREDICTED: Mus musculus predicted gene, EG625540 (EG625540), mRNA.					
Mus musculus	Riken	ILMN_204690	ILMN_204690	A330009E21RIK	ri|A330009E21|PX00130P13|AK039264|2345					AK039264	A330009E21Rik		ILMN_1224124	005810289	S	1163	GCATGAGCAGCGTTGTGGAAGACAAGTATGGAAAAGTTGAGGCCACTCGC										
Mus musculus	MEEBO	ILMN_189980	ILMN_189980	SCL0004190.1_3	scl0004190.1_3	AK007682.1			12841381	AK007682.1	scl0004190.1_3		ILMN_2466131	006660424	S	20	TACTCTAAGTTCCATGGGCTTGAAATGTGTGTTGATGCGAGGACTTTTGG										
Mus musculus	RefSeq	ILMN_218750	ILMN_218750	BBS2	NM_026116.2	NM_026116.2		67378	31981061	NM_026116.2	Bbs2	NP_080392.1	ILMN_1253752	005270228	S	2725	CCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCC	8	-	96592026-96592075	8qC5	Mus musculus Bardet-Biedl syndrome 2 (human) (Bbs2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process by which a protein is transported to, or maintained in, a location within an organelle [goid 33365] [evidence IDA]; A process that is carried out at the cellular level and by which the structure of a cilium is organized. Morphogenesis pertains to the creation of form [goid 60271] [evidence IMP]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking [goid 21756] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]; The assembly and organization of the sperm flagellar axoneme, the bundle of microtubules and associated proteins that forms the core of the eukaryotic sperm flagellum, and is responsible for movement [goid 7288] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410125H22Rik; AI447581	2410125H22Rik; AI447581
Mus musculus	RefSeq	ILMN_191055	ILMN_191055	OCA2	NM_021879.2	NM_021879.2		18431	118130387	NM_021879.2	Oca2	NP_068679.1	ILMN_2475689	000150681	S	2780	GGCAACCAATCTTTGTTCAGGTGGATGATGGGAAACTACATCTTCTCCCT	7	+	63791547-63791596	7qB5-qC	Mus musculus oculocutaneous albinism II (Oca2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; The directed movement of citrate, 2-hydroxy-1,2,3-propanetricarboyxlate, into, out of, within or between cells [goid 15746] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]	Catalysis of the transfer of arsenite from one side of a membrane to the other [goid 15105] [evidence IEA]; Catalysis of the transfer of citrate, 2-hydroxy-1,2,3-propanetricarboyxlate, from one side of the membrane to the other [goid 15137] [evidence IEA]	D7Nic1; D7Icr28RN; D7H15S12	D7Nic1; D7Icr28RN; D7H15S12
Mus musculus	RefSeq	ILMN_218542	ILMN_218542	RPS29	NM_009093.1	NM_009093.1		20090	6677802	NM_009093.1	Rps29	NP_033119.1	ILMN_2697103	005270543	S	123	CATGTGCCGCCAGTGCTTCCGGCAGTACGCGAAGGACATAGGCTTCATTA	12	-	70259649-70259698	12qC2	Mus musculus ribosomal protein S29 (Rps29), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [evidence ISA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence ISA]		
Mus musculus	RefSeq	ILMN_220419	ILMN_220419	STOML2	NM_023231.2	NM_023231.2		66592	31981247	NM_023231.2	Stoml2	NP_075720.1	ILMN_2721799	000430017	S	1265	CGTCTTTGGCCGTCCACTTCCACCCTTCAGTCCAGGTCGGTGTGAGGAGT	4	-	43040795-43040844	4qA5	Mus musculus stomatin (Epb7.2)-like 2 (Stoml2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]			0610038F01Rik; MSLP2	0610038F01Rik; MSLP2
Mus musculus	RefSeq	ILMN_252093	ILMN_252093	ZKSCAN17	NM_172941.2	NM_172941.2		268417	31982134	NM_172941.2	Zkscan17	NP_766529.2	ILMN_2916791	002490259	S	3197	GCTAGGAAACCTCAAGCAACCAAACACGTGGTCCCACACTGCCCTGGCAC	11	-	59299307-59299356	11qB1.3	Mus musculus zinc finger with KRAB and SCAN domains 17 (Zkscan17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MGC36538; Zfp496; D130067D09; RP23-210M6.6; Nizp1; BC040205	MGC36538; Zfp496; D130067D09; RP23-210M6.6; Nizp1; BC040205
Mus musculus	MEEBO	ILMN_214818	ILMN_214818	4930527B16RIK	scl40317.1.1637_8	XM_147531.1			20879985	XM_147531.1	4930527B16Rik		ILMN_2652291	002320131	S	1885	GGGACAAGCAACCTGTGTTTAGTTGTTAGGGAGAATAGCAGCTGCCATGT										
Mus musculus	MEEBO	ILMN_194632	ILMN_194632	ARHGAP8	scl47669.10_448				31982548	NM_146061	Arhgap8		ILMN_1248312	006940128	S	15	TGCCCACTGTCATGGGAAGGGACACCAGGCCCTATCTATTGGTCATTGAC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194632	ILMN_194632	ARHGAP8	scl47669.10_448				31982548	NM_146061	Arhgap8		ILMN_1251846	002810689	S	1477	GCCAGCCCCCTGTCACTGCCTCAAGTCACTTTATACTCCCAGTCTGTTGG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209767	ILMN_209767	OLFR101	NM_146834.1	NM_146834.1		258831	22129194	NM_146834.1	Olfr101	NP_667045.1	ILMN_1246407	002680326	S	784	GCCTCAGGCAGCTCTCTGGATCAGGATACAATCATCGCCATCATGTACAG	17	-	37436533-37436582	17qB1	Mus musculus olfactory receptor 101 (Olfr101), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR250-2	MOR250-2
Mus musculus	RefSeq	ILMN_203308	ILMN_311125	LOC100045867	XM_001475095.1	XM_001475095.1		100045867	149252183	XM_001475095.1	LOC100045867	XP_001475145.1	ILMN_1225207	005550095	S	221	GAGCCAAAGGAAAGGGCGCGAAGGGGGTTAGCATGGAGCGGCAGGGTATT					PREDICTED: Mus musculus hypothetical protein LOC100045867 (LOC100045867), mRNA.					
Mus musculus	RefSeq	ILMN_203241	ILMN_311125	LOC100045867	XM_001475095.1	XM_001475095.1		100045867	149252183	XM_001475095.1	LOC100045867	XP_001475145.1	ILMN_1223965	007570739	S	2333	CCTTGTCTCAGGGCAGGAGCAAAGTGACCAGCAGTGGTTTTCAGCAAATG					PREDICTED: Mus musculus hypothetical protein LOC100045867 (LOC100045867), mRNA.					
Mus musculus	RefSeq	ILMN_193995	ILMN_229230	EIF2S1	NM_026114.3	NM_026114.3		13665	142386277	NM_026114.3	Eif2s1	NP_080390.1	ILMN_2696159	006840711	S	1547	GGGCAAGTAACTAAATGACTTATGCAGGAACAGACTCTCCAAAGGAATGT	12	+	79986392-79986441	12qC3	Mus musculus eukaryotic translation initiation factor 2, subunit 1 alpha (Eif2s1), mRNA.	Complex of three heterogeneous polypeptide chains, that form a ternary complex with initiator methionyl-tRNA and GTP. This ternary complex binds to free 40S subunit, which subsequently binds the 5' end of mRNA [goid 5850] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of translation initiation, as a result of a stimulus indicating the organism is under stress [goid 43558] [evidence IDA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Eif2a; 35kDa; 2410026C18Rik; 0910001O23Rik; eIF2alpha	Eif2a; 35kDa; 2410026C18Rik; 0910001O23Rik; eIF2alpha
Mus musculus	RefSeq	ILMN_194012	ILMN_211327	ZFYVE9	NM_183300.2	NM_183300.2		230597	119508809	NM_183300.2	Zfyve9	NP_899123.2	ILMN_2502525	001940187	S	1771	CGTGAAAATATTCCATGGGTCAGAGTATAAAGCAAACGGAAAAGTCATCA	4	-	108316951-108317000	4qC7	Mus musculus zinc finger, FYVE domain containing 9 (Zfyve9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence ISO]	E030027L17; NSP; Madhip; SMADIP; SARA	E030027L17; NSP; Madhip; SMADIP; SARA
Mus musculus	RefSeq	ILMN_214852	ILMN_214852	OLFR701	NM_028910.2	NM_028910.2		66786	142368940	NM_028910.2	Olfr701	NP_083186.1	ILMN_2652694	003400040	S	2685	CGTAGTTTTCCTTTGTCATTAATCAGTTTCCTTAGTAATGGGCTGGATTC	7	+	113963845-113963894	7qE3	Mus musculus olfactory receptor 701 (Olfr701), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123418; 4932441H21Rik; MOR283-1; 4933433E02Rik	MGC123418; 4932441H21Rik; MOR283-1; 4933433E02Rik
Mus musculus	RefSeq	ILMN_217925	ILMN_233826	LOC630302	XM_903427.2	XM_903427.2		630302	149263783	XM_903427.2	LOC630302	XP_908520.2	ILMN_2724779	000460521	S	48	TGTCCAGTGTGAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGC	12|NT_114985.2	+	737900-737949		PREDICTED: Mus musculus similar to VH283 protein (LOC630302), mRNA.					
Mus musculus	RefSeq	ILMN_188149	ILMN_233826	LOC630302	XM_903427.2	XM_903427.2		630302	149263783	XM_903427.2	LOC630302	XP_908520.2	ILMN_2450198	002850228	S	287	ACAACCTGTACCTGCAAATGAGCAGTCTGAGGTCTGAGGACACGGCCTTG	12|NT_114985.2	+	738139-738188		PREDICTED: Mus musculus similar to VH283 protein (LOC630302), mRNA.					
Mus musculus	Riken	ILMN_201868	ILMN_201868	VTI1-PENDING	ri|4631433P05|PX00012I18|AK014541|1599					AK014541	Vti1-pending		ILMN_1216075	006960634	S	1362	TCTAATGGAGGGTTCTTTGACAGTCAGCTCCCCTGCACCCCAGTTTCACC										
Mus musculus	RefSeq	ILMN_208988	ILMN_208988	CASP12	NM_009808.2	NM_009808.2		12364	31981867	NM_009808.2	Casp12	NP_033938.2	ILMN_2989535	004120341	S	2248	GGGGTTACAAGTTCTGTACAAGCATGCCTTGAAATTGTGAGAGCCACCCC	9	+	5372703-5372752	9qA1	Mus musculus caspase 12 (Casp12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; The process of apoptosis in cells infected with a virus [goid 6926] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218154	ILMN_218154	POU2F1	NM_198932.2	NM_198932.2		18986	114431253	NM_198932.2	Pou2f1	NP_945150.2	ILMN_3127178	003360563	A	2191	GGGAACTCTGCACCTACAGCCAGCCTTCATGCCTCCTCCACCTCAACTGA	1	-	167805950-167805999	1qH2.3	Mus musculus POU domain, class 2, transcription factor 1 (Pou2f1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IGI]; The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity [goid 30910] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Otf-1; Otf1; 2810482H01Rik; Oct-1	Otf-1; Otf1; 2810482H01Rik; Oct-1
Mus musculus	RefSeq	ILMN_187383	ILMN_187383	UBE2G1	NM_025985.4	NM_025985.4		67128	115292440	NM_025985.4	Ube2g1	NP_080261.2	ILMN_2443644	005960719	S	1491	CGATGACTTCAGAGGAGGGGTCATCACTAGGTGCTTTGTCCTTTTTGTAC	11	+	72497637-72497686	11qB4	Mus musculus ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) (Ube2g1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	D130023C12Rik; AU014992; AI256795; AW552068; 2700059C12Rik	D130023C12Rik; AU014992; AI256795; AW552068; 2700059C12Rik
Mus musculus	RefSeq	ILMN_187383	ILMN_187383	UBE2G1	NM_025985.4	NM_025985.4		67128	115292440	NM_025985.4	Ube2g1	NP_080261.2	ILMN_2453620	006650494	S	1482	AGTTTTTCACGATGACTTCAGAGGAGGGGTCATCACTAGGTGCTTTGTCC	11	+	72497628-72497677	11qB4	Mus musculus ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) (Ube2g1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	D130023C12Rik; AU014992; AI256795; AW552068; 2700059C12Rik	D130023C12Rik; AU014992; AI256795; AW552068; 2700059C12Rik
Mus musculus	RefSeq	ILMN_187383	ILMN_187383	UBE2G1	NM_025985.4	NM_025985.4		67128	115292440	NM_025985.4	Ube2g1	NP_080261.2	ILMN_2482026	004590082	S	696	AGTGTCATTTCTATGCTGGCAGATCCTAATGGAGACTCACCTGCAAATGT	11	+	72491326-72491375	11qB4	Mus musculus ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) (Ube2g1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	D130023C12Rik; AU014992; AI256795; AW552068; 2700059C12Rik	D130023C12Rik; AU014992; AI256795; AW552068; 2700059C12Rik
Mus musculus	RefSeq	ILMN_215239	ILMN_215239	OLFR938	NM_146438.1	NM_146438.1		258430	33239205	NM_146438.1	Olfr938	NP_666649.1	ILMN_2657127	001300386	S	645	AGCTCTTACATCTTCATCATTGTCAGTGTTCTCCACATTCAATCCACTGG	9	-	38885634-38885683	9qA5.1	Mus musculus olfactory receptor 938 (Olfr938), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR171-25	MOR171-25
Mus musculus	RefSeq	ILMN_187204	ILMN_187204	TOPORS	NM_134097.3	NM_134097.3		106021	100817351	NM_134097.3	Topors	NP_598858.2	ILMN_2442075	002140709	S	3186	GGCTGAACCATCGAGACCAGTGCCATCTCCACGGACCTCACTGTCATCAG	4	-	40207245-40207294	4qA5	Mus musculus topoisomerase I binding, arginine/serine-rich (Topors), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	p53BP3/LUN; TP53BPL; AW105885; LUN	p53BP3/LUN; TP53BPL; AW105885; LUN
Mus musculus	RefSeq	ILMN_210057	ILMN_226316	1700030F18RIK	NM_028180.2	NM_028180.2		72277	142388040	NM_028180.2	1700030F18Rik	NP_082456.1	ILMN_2601793	005890369	S	517	GACCACAAAACCCAAGCCAGGCACGTAGAGAGCGGATTTCAATGGTTCAG	15	-	99748833-99748881:99748882-99748882	15qF1	Mus musculus RIKEN cDNA 1700030F18 gene (1700030F18Rik), mRNA.					
Mus musculus	Riken	ILMN_204629	ILMN_204629	C730004N19RIK	ri|C730004N19|PX00086K23|AK050030|1842					AK050030	C730004N19Rik		ILMN_1218661	005310300	S	1056	GTTAATGTCTGATGATGCAGGTGATGATAGAGGGGGAATGTTTCCCTGAG										
Mus musculus	RefSeq	ILMN_215741	ILMN_215741	MANEA	NM_172865.2	NM_172865.2		242362	46048328	NM_172865.2	Manea	NP_766453.2	ILMN_2663065	006650291	S	4179	GGGTCCTGAAGCCAGTTCTACACAGATATCAAGGGATGGCTATATTCACA	4	-	26252052-26252101	4qA3	Mus musculus mannosidase, endo-alpha (Manea), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal alpha-glucosyl-(1,3)-mannosyl unit from Glc-Man(9)-(GlcNAc)(2) oligosaccharide component of the glycoprotein produced in the Golgi membrane [goid 4569] [evidence IEA]	4932703L02Rik	4932703L02Rik
Mus musculus	Riken	ILMN_204661	ILMN_204661	NFIB	ri|9430039I15|PX00108F22|AK034793|2847					AK034793	Nfib		ILMN_2566674	005290202	S	2546	CATGACAACTTGATTGACAGCTGTCTCAGAGGCGACATTGTAAGGTGGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209878	ILMN_209878	ANKRD54	NM_144849.1	NM_144849.1		223690	21450058	NM_144849.1	Ankrd54	NP_659098.1	ILMN_2600078	001940228	S	1464	CCCCCGCAATCACTGAAACACTACGAATGGGCGTCCGTTTTGCAGCCCAG	15	-	78883888-78883937	15qE1	Mus musculus ankyrin repeat domain 54 (Ankrd54), mRNA.				C730048E16Rik; EST475269; MGC25673; EST1068184	C730048E16Rik; EST475269; MGC25673; EST1068184
Mus musculus	RefSeq	ILMN_209878	ILMN_209878	ANKRD54	NM_144849.1	NM_144849.1		223690	21450058	NM_144849.1	Ankrd54	NP_659098.1	ILMN_2722184	003450768	S	711	TCGAAGCTGAACATCCTACAGGAGGGTCATTCCCAGTGTCTGGAGGCCGT	15	-	78885740-78885789	15qE1	Mus musculus ankyrin repeat domain 54 (Ankrd54), mRNA.				C730048E16Rik; EST475269; MGC25673; EST1068184	C730048E16Rik; EST475269; MGC25673; EST1068184
Mus musculus	RefSeq	ILMN_209878	ILMN_209878	ANKRD54	NM_144849.1	NM_144849.1		223690	21450058	NM_144849.1	Ankrd54	NP_659098.1	ILMN_2872599	004730291	S	1540	GGCTCAGGTCCTTATCCCAGGATCCTCTAAGCCTTAGGTGTTGTGGCAAG	15	-	78883812-78883861	15qE1	Mus musculus ankyrin repeat domain 54 (Ankrd54), mRNA.				C730048E16Rik; EST475269; MGC25673; EST1068184	C730048E16Rik; EST475269; MGC25673; EST1068184
Mus musculus	RefSeq	ILMN_221662	ILMN_221662	E2F1	NM_007891.3	NM_007891.3		13555	145966832	NM_007891.3	E2f1	NP_031917.1	ILMN_1231138	000060369	S	2392	CTGCACTTTGATTTGTTTCCTAACAGTTCTGTTCCCTCCTGCTTTGATTT				2qH1	Mus musculus E2F transcription factor 1 (E2f1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	mKIAA4009; E2F-1; KIAA4009	mKIAA4009; E2F-1; KIAA4009
Mus musculus	RefSeq	ILMN_214604	ILMN_214604	SLC38A5	NM_172479.2	NM_172479.2		209837	154350208	NM_172479.2	Slc38a5	NP_766067.2	ILMN_2649773	005820753	S	1775	CCCACATAGTTCTCACTTCCTAGATGAAGCTGTTAGGGTTACCCTGGCGC				XqA1.1	Mus musculus solute carrier family 38, member 5 (Slc38a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			JM24; SN2; E330031E14; C81234	JM24; SN2; E330031E14; C81234
Mus musculus	RefSeq	ILMN_216785	ILMN_216785	SLC5A7	NM_022025.3	NM_022025.3		63993	41055979	NM_022025.3	Slc5a7	NP_071308.2	ILMN_1243388	005290537	S	3730	AAGACAAAAGAGTGAATTTTGCCCAACTCATCATCTGTGCCCTTCCATCG	17	-	54413832-54413881	17qC	Mus musculus solute carrier family 5 (choline transporter), member 7 (Slc5a7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of choline into, out of, within or between cells. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 15871] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The chemical reactions and pathways resulting in the formation of acetylcholine, the acetic acid ester of the organic base choline [goid 8292] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: choline(out) + Na+(out) = choline(in) + Na+(in) [goid 5307] [evidence ISO]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	CHT1	CHT1
Mus musculus	RefSeq	ILMN_214580	ILMN_214580	NLRP4B	NM_172481.2	NM_172481.2		210045	142350253	NM_172481.2	Nlrp4b	NP_766069.1	ILMN_2649484	004780133	S	3081	TAACAAGAGTTTTACTTTATTTTGTATTACTGGAGCTATAGTGTAAGTCC	7	+	11315314-11315363	7qA1	Mus musculus NLR family, pyrin domain containing 4B (Nlrp4b), mRNA.		Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E330024M09; AU022726; Nalp4b; Nalp-gamma	E330024M09; AU022726; Nalp4b; Nalp-gamma
Mus musculus	RefSeq	ILMN_185658	ILMN_185658	ZFP622	NM_144523.2	NM_144523.2		52521	31542464	NM_144523.2	Zfp622	NP_653106.1	ILMN_2879570	006580437	S	2402	TTCCCAGCAGTAGGCTTGTGAATAAACACTCTTTCAGTATACAAAGTGCC	15	+	25927836-25927885	15qB1	Mus musculus zinc finger protein 622 (Zfp622), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D15Ertd806e; 1110033B05Rik; ZPR9	D15Ertd806e; 1110033B05Rik; ZPR9
Mus musculus	RefSeq	ILMN_185658	ILMN_185658	ZFP622	NM_144523.2	NM_144523.2		52521	31542464	NM_144523.2	Zfp622	NP_653106.1	ILMN_1235380	001440224	S	2263	CTCATTCATTGAGCTACCTTTGGGACTTTGAGAAAGTGATACACTTTGTG	15	+	25927697-25927746	15qB1	Mus musculus zinc finger protein 622 (Zfp622), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D15Ertd806e; 1110033B05Rik; ZPR9	D15Ertd806e; 1110033B05Rik; ZPR9
Mus musculus	RefSeq	ILMN_221301	ILMN_221301	CDGAP	NM_020260.2	NM_020260.2		12549	55770847	NM_020260.2	Cdgap	NP_064656.2	ILMN_1222978	004890554	S	2530	TCCTCGAGTCAGAGTCTCAGCAGGAGCTCAGCCCAGACCCAGCCAGTCTA	16	-	38603598-38603647	16qB4	Mus musculus CDC42 GTPase-activating protein (Cdgap), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IDA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]	5830477L08Rik; AU041750	5830477L08Rik; AU041750
Mus musculus	RefSeq	ILMN_221301	ILMN_221301	CDGAP	NM_020260.2	NM_020260.2		12549	55770847	NM_020260.2	Cdgap	NP_064656.2	ILMN_1235143	004290369	S	2605	AGAAGGTATCTTCTCCGGCTAGGATAGAGATAGGAGGCCCAAGGAATCTC	16	-	38603523-38603572	16qB4	Mus musculus CDC42 GTPase-activating protein (Cdgap), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IDA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]	5830477L08Rik; AU041750	5830477L08Rik; AU041750
Mus musculus	RefSeq	ILMN_191185	ILMN_191185	PTGR2	NM_029880.2	NM_029880.2		77219	85719319	NM_029880.2	Ptgr2	NP_084156.2	ILMN_2476885	004540646	S	1204	CATGATGACAGGGGGCAACGTAGGGAAACAGATCGTCTGCATTTCAGAAG	12	+	85654900-85654949	12qD1	Mus musculus prostaglandin reductase 2 (Ptgr2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprostanoate + NAD(P)+ = (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprosta-13-enoate + NAD(P)H + H+ [goid 47522] [evidence IEA]	AI838763; 9630002F03Rik; 1810016I24Rik; B830026H24Rik	AI838763; 9630002F03Rik; 1810016I24Rik; B830026H24Rik
Mus musculus	RefSeq	ILMN_217043	ILMN_217106	TGOLN1	NM_009443.3	NM_009443.3		22134	87044904	NM_009443.3	Tgoln1	NP_033469.1	ILMN_2678466	003520630	S	2249	TCTTGGATTATGCTGTGTCTAGCGTTTTATTCCAGTCTGTATGGTTACGC	6	-	72561140-72561189	6qC1	Mus musculus trans-golgi network protein (Tgoln1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D6Ertd384e; AU015504; Ttgn1; TGN38; TGN38A	D6Ertd384e; AU015504; Ttgn1; TGN38; TGN38A
Mus musculus	RefSeq	ILMN_217106	ILMN_217106	TGOLN1	NM_009443.3	NM_009443.3		22134	87044904	NM_009443.3	Tgoln1	NP_033469.1	ILMN_1248415	003420372	S	2810	CACAGCTTGTAACCCTTGGTAATAATGTTGGATGCCGGGGCCTATGCATG	6	-	72560579-72560628	6qC1	Mus musculus trans-golgi network protein (Tgoln1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D6Ertd384e; AU015504; Ttgn1; TGN38; TGN38A	D6Ertd384e; AU015504; Ttgn1; TGN38; TGN38A
Mus musculus	RefSeq	ILMN_199983	ILMN_233504	LOC670881	XR_003172.1	XR_003172.1		670881	94376053	XR_003172.1	LOC670881		ILMN_1240273	005900138	S	547	CACGGACAGATCCATGAACAAGAGGCCCTACCACAGGGCAAACCCTCTCT					PREDICTED: Mus musculus hypothetical protein LOC670881 (LOC670881), mRNA.					
Mus musculus	RefSeq	ILMN_235720	ILMN_235720	KLHL5	NM_175174.2	NM_175174.2		71778	31340910	NM_175174.2	Klhl5	NP_780383.1	ILMN_2944870	006660707	S	1440	GATGCTACAGGGAAGACACACTTTCTCTGCAGTGTGGATGAGCCAGTCTG	5	+	65432374-65432423	5qC3.1	Mus musculus kelch-like 5 (Drosophila) (Klhl5), mRNA.				1300013C10Rik	1300013C10Rik
Mus musculus	RefSeq	ILMN_185129	ILMN_185129	ZZZ3	NM_198416.2	NM_198416.2		108946	124053446	NM_198416.2	Zzz3	NP_940808.2	ILMN_2499888	000380358	S	1817	CCAGTCAGCACACTGCCGAGGAGGAAGATGATGACCCTGATGTTTATTAC	3	+	152091709-152091758	3qH3	Mus musculus zinc finger, ZZ domain containing 3 (Zzz3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW556059; 6430567E01Rik; AI481057; R75514; AA408566; 3110065C23Rik	AW556059; 6430567E01Rik; AI481057; R75514; AA408566; 3110065C23Rik
Mus musculus	RefSeq	ILMN_185129	ILMN_185129	ZZZ3	NM_198416.2	NM_198416.2		108946	124053446	NM_198416.2	Zzz3	NP_940808.2	ILMN_2432040	005340132	S	1810	GAGAGTGCCAGTCAGCACACTGCCGAGGAGGAAGATGATGACCCTGATGT	3	+	152091702-152091751	3qH3	Mus musculus zinc finger, ZZ domain containing 3 (Zzz3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW556059; 6430567E01Rik; AI481057; R75514; AA408566; 3110065C23Rik	AW556059; 6430567E01Rik; AI481057; R75514; AA408566; 3110065C23Rik
Mus musculus	RefSeq	ILMN_185129	ILMN_185129	ZZZ3	NM_198416.2	NM_198416.2		108946	124053446	NM_198416.2	Zzz3	NP_940808.2	ILMN_2424408	005670180	S	249	GCCTGAAGCTGAAACTCAATTGTAGATCATAGCTCCATCTCCTTCAGAAT	3	+	152085636-152085685	3qH3	Mus musculus zinc finger, ZZ domain containing 3 (Zzz3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW556059; 6430567E01Rik; AI481057; R75514; AA408566; 3110065C23Rik	AW556059; 6430567E01Rik; AI481057; R75514; AA408566; 3110065C23Rik
Mus musculus	RefSeq	ILMN_191947	ILMN_185129	ZZZ3	NM_198416.2	NM_198416.2		108946	124053446	NM_198416.2	Zzz3	NP_940808.2	ILMN_2483638	003840273	S	7169	GCTCTAATGTCCGTGCTCCCTGTCGGTTACCTTTGGGGCAGTGTACGCAT	3	+	152125420-152125469	3qH3	Mus musculus zinc finger, ZZ domain containing 3 (Zzz3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW556059; 6430567E01Rik; AI481057; R75514; AA408566; 3110065C23Rik	AW556059; 6430567E01Rik; AI481057; R75514; AA408566; 3110065C23Rik
Mus musculus	RefSeq	ILMN_185129	ILMN_185129	ZZZ3	NM_198416.2	NM_198416.2		108946	124053446	NM_198416.2	Zzz3	NP_940808.2	ILMN_2475617	004830630	S	1573	CCTACTAAAACCACATCTCCTTACAGAGAAAATGGACAGTTGGAGGAGAC	3	+	152091465-152091514	3qH3	Mus musculus zinc finger, ZZ domain containing 3 (Zzz3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW556059; 6430567E01Rik; AI481057; R75514; AA408566; 3110065C23Rik	AW556059; 6430567E01Rik; AI481057; R75514; AA408566; 3110065C23Rik
Mus musculus	RefSeq	ILMN_220538	ILMN_220538	OLFR1258	NM_146978.1	NM_146978.1		258980	22128972	NM_146978.1	Olfr1258	NP_667189.1	ILMN_1237353	001090338	S	776	CTTCAGCCACTTTGTCTATTGATAAAGCAGTTGCTGTCTTCTACACTATG	2	+	89770743-89770792	2qE1	Mus musculus olfactory receptor 1258 (Olfr1258), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR232-3	MOR232-3
Mus musculus	RefSeq	ILMN_221216	ILMN_221216	ARSG	NM_028710.2	NM_028710.2		74008	54607164	NM_028710.2	Arsg	NP_082986.2	ILMN_2732601	003130735	S	2608	AGCAAGCTAAACCAAAGTGAGGTTTTCCCAGGCCTTGGACCCTTCTCTCC	11	+	109434284-109434333	11qE1	Mus musculus arylsulfatase G (Arsg), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]	AI846872; MGC90567; 6330406P08Rik	AI846872; MGC90567; 6330406P08Rik
Mus musculus	RefSeq	ILMN_259687	ILMN_259687	CYP4F18	NM_024444.1	NM_024444.1		72054	13277363	NM_024444.1	Cyp4f18	NP_077764.1	ILMN_3018445	005360609	I	175	TCTTCGCCTCCGCTGTTTCCCACAGCCTCCCAAACGAAACTGGATCTTGG	8	-	74532956-74533005	8qB3.3	Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 18 (Cyp4f18), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: (6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate + NADPH + H2O = (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-trihydroxyicosa-6,8,10,14-tetraenoate + NADP+ + H2O [goid 50051] [evidence IEA]	Cypf18; 1810054N16Rik	Cypf18; 1810054N16Rik
Mus musculus	RefSeq	ILMN_259687	ILMN_259687	CYP4F18	NM_024444.1	NM_024444.1		72054	13277363	NM_024444.1	Cyp4f18	NP_077764.1	ILMN_3090207	002120392	A	1377	ATGCCGACAACGTCAAGGGCAGGTCACCCCTGGCTTTTATTCCCTTCTCG	8	-	74512969-74513018	8qB3.3	Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 18 (Cyp4f18), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: (6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate + NADPH + H2O = (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-trihydroxyicosa-6,8,10,14-tetraenoate + NADP+ + H2O [goid 50051] [evidence IEA]	Cypf18; 1810054N16Rik	Cypf18; 1810054N16Rik
Mus musculus	RefSeq	ILMN_184923	ILMN_228005	LEMD2	NM_146075.1	NM_146075.1		224640	22122562	NM_146075.1	Lemd2	NP_666187.1	ILMN_1233040	002470528	S	1672	GCCTCCAGAAGACACAAGACACCCCCTTTTGGACCTATTGCTGGTCTCTG	17	-	27326729-27326778	17qA3.3	Mus musculus LEM domain containing 2 (Lemd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC37253; Lem2; BC026588	MGC37253; Lem2; BC026588
Mus musculus	RefSeq	ILMN_208993	ILMN_242967	AGR3	NM_207531.2	NM_207531.2		403205	142372561	NM_207531.2	Agr3	NP_997414.1	ILMN_1215701	003190767	S	460	CTGGAAGATACTCTAACAGACTATACACGTATGAACCCCAGGACTTACCC	12	+	36674885-36674934	12qA3	Mus musculus anterior gradient homolog 3 (Xenopus laevis) (Agr3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			BCMP11; E030025L21Rik; Gm888	BCMP11; E030025L21Rik; Gm888
Mus musculus	RefSeq	ILMN_222604	ILMN_222604	EIF6	NM_010579.2	NM_010579.2		16418	133891658	NM_010579.2	Eif6	NP_034709.1	ILMN_1220294	004920408	S	1354	TGCCCAACCCTTCACCTGTGCCATCTCTTGACAATTGTTACTGGAAAGCC	2	-	155645664-155645713	2qH1	Mus musculus eukaryotic translation initiation factor 6 (Eif6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The aggregation, arrangement and bonding together of the large and small ribosomal subunits into a functional ribosome [goid 42256] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any part of a ribosome [goid 43022] [evidence IEA]	AA408895; Itgb4bp; imc-415; 1110004P11; p27BBP	AA408895; Itgb4bp; imc-415; 1110004P11; p27BBP
Mus musculus	RefSeq	ILMN_212382	ILMN_212382	RHOBTB2	NM_153514.3	NM_153514.3		246710	31543589	NM_153514.3	Rhobtb2	NP_705734.3	ILMN_2974460	006980551	S	5046	CTTAGAGGATGGGGGTAAAAACACAAACCCACAACCCCTCTCCACACACC	14	-	68520130-68520179	14qD2	Mus musculus Rho-related BTB domain containing 2 (Rhobtb2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Dbc2; MGC28699; E130206H14Rik; mKIAA0717	Dbc2; MGC28699; E130206H14Rik; mKIAA0717
Mus musculus	Riken	ILMN_203123	ILMN_203123	6330514O11RIK	ri|6330514O11|PX00042L04|AK031971|2636					AK031971	6330514O11Rik		ILMN_1226353	003940446	S	2428	GCTAGGACCCCTCATGGGACAAGCATTAAGGAACCTGCACCTACTGTGCA										
Mus musculus	RefSeq	ILMN_217383	ILMN_259626	LOC675933	XM_986119.2	XM_986119.2		675933	149253007	XM_986119.2	LOC675933	XP_991213.2	ILMN_1235807	000050750	S	3478	AGGCGGCCCCCAGAACCAATTTCCATTCCAGTTTGGCCGAGACCGAGTCT					PREDICTED: Mus musculus similar to AT rich interactive domain 1A (Swi1 like) (LOC675933), mRNA.					
Mus musculus	RefSeq	ILMN_217383	ILMN_259626	LOC675933	XM_986119.2	XM_986119.2		675933	149253007	XM_986119.2	LOC675933	XP_991213.2	ILMN_1230791	006620767	S	6297	GGCTTTCCCAGTCCTTGCATCAACGGGATGCCACATTTCATAACTGTTTT					PREDICTED: Mus musculus similar to AT rich interactive domain 1A (Swi1 like) (LOC675933), mRNA.					
Mus musculus	RefSeq	ILMN_192738	ILMN_216956	PRMT1	NM_019830.2	NM_019830.2		15469	118130593	NM_019830.2	Prmt1	NP_062804.1	ILMN_2490857	006450743	S	1127	GCGCATCCGGTAGTCGGTGGAACAAGAGAGCTCACACAGCTGACCCTTGA	7	-	52232223-52232269:52232270-52232272	7qB4	Mus musculus protein arginine N-methyltransferase 1 (Prmt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence ISO]; The process of methylation of peptidyl-arginine to form peptidyl-N(omega),N(omega)-dimethyl-L-arginine [goid 19919] [evidence ISO]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The addition of a methyl group onto a terminal nitrogen (omega nitrogen) atom of an arginine residue in a protein [goid 35247] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IMP]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence ISO]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [evidence ISO]; Catalysis of the reaction: S-adenosyl-L-methionine + (cytochrome c)-arginine = S-adenosyl-L-homocysteine + (cytochrome c)-N(omega)-methyl-arginine [goid 16275] [evidence ISO]; Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the same terminal nitrogen (omega nitrogen) residue that was previously methylated, resulting in asymmetrical peptidyl-N(omega),N(omega)-dimethylated arginine residues [goid 35242] [evidence ISO]; Catalysis of the addition of a methyl group to either of the unmethylated terminal nitrogen atoms (also called omega nitrogen) in peptidyl-arginine to form an omega-N-G-monomethylated arginine residue [goid 35241] [evidence ISO]	AW214366; Mrmt1; 6720434D09Rik; Hrmt1l2	AW214366; Mrmt1; 6720434D09Rik; Hrmt1l2
Mus musculus	RefSeq	ILMN_214433	ILMN_214433	CTNNAL1	NM_018761.2	NM_018761.2		54366	31542342	NM_018761.2	Ctnnal1	NP_061231.2	ILMN_1232261	002320168	S	3481	ACTTCACTGGGTTCTCAGTGTTGCTATCTCAGTGACAAAGCAGCTCCCTC	4	-	56823940-56823989	4qB3	Mus musculus catenin (cadherin associated protein), alpha-like 1 (Ctnnal1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence ISO]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C86009; AW545119; AI616177; Catnal1; ACRP	C86009; AW545119; AI616177; Catnal1; ACRP
Mus musculus	RefSeq	ILMN_220947	ILMN_258678	TSEN54	NM_029557.1	NM_029557.1		76265	108389162	NM_029557.1	Tsen54	NP_083833.1	ILMN_2729008	001770739	S	1646	CTCTCAGGGGCCGTGCCAGCTGTCTCTCATATAGGACTCACCTGGATGGA	11	+	115684090-115684139	11qE2	Mus musculus tRNA splicing endonuclease 54 homolog (S. cerevisiae) (Tsen54), mRNA. XM_915656 XM_993828 XM_993849	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		0610034P02Rik; RP23-354K2.5	0610034P02Rik; RP23-354K2.5
Mus musculus	MEEBO	ILMN_195516	ILMN_195516	CCAR1	scl37887.24_414				33563287	NM_026201	Ccar1		ILMN_2516266	000240035	S	11	CTTAGAGCTTAGAGTCATGGTCCTCACGGCACTGTTGCTGCGCTCGGTAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence ISO]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_213038	ILMN_213038	LIMA1	NM_023063.1	NM_023063.1		65970	12746445	NM_023063.1	Lima1	NP_075550.1	ILMN_1228374	005910022	S	2875	CTCTGGTAGATAGGGAAAGCTTACTGTCTTTCATCCTACATCCTGTATTT	15	-	99610014-99610063	15qF1	Mus musculus LIM domain and actin binding 1 (Lima1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Eplin; 1110021C24Rik; 3526402A12Rik; D15Ertd366e	Eplin; 1110021C24Rik; 3526402A12Rik; D15Ertd366e
Mus musculus	RefSeq	ILMN_213038	ILMN_213038	LIMA1	NM_023063.1	NM_023063.1		65970	12746445	NM_023063.1	Lima1	NP_075550.1	ILMN_2669189	001400348	S	3877	CTGATATTCCAAATGATGTGTATGGCGGGGTGGGCTTAAGGTAGTGGCCT	15	-	99609012-99609061	15qF1	Mus musculus LIM domain and actin binding 1 (Lima1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Eplin; 1110021C24Rik; 3526402A12Rik; D15Ertd366e	Eplin; 1110021C24Rik; 3526402A12Rik; D15Ertd366e
Mus musculus	RefSeq	ILMN_213274	ILMN_213274	CXCL15	NM_011339.2	NM_011339.2		20309	113374148	NM_011339.2	Cxcl15	NP_035469.1	ILMN_2635462	000520403	S	249	TGATTTGTTTGGATCCTGATGCTCCATGGGTGAAGGCTACTGTTGGCCCA	5	+	91225362-91225375:91225376-91225411	5qE1	Mus musculus chemokine (C-X-C motif) ligand 15 (Cxcl15), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IDA]	Scyb15; lungkine; weche	Scyb15; lungkine; weche
Mus musculus	RefSeq	ILMN_206395	ILMN_225632	ZFP26	NM_011753.2	NM_011753.2		22688	141801412	NM_011753.2	Zfp26	NP_035883.1	ILMN_1222264	005820221	S	56	GAAGGATTTCGGCCGTTGGAATCTGTCTTCGCGCCCCATCGCTCCAGGAA	9	-	20264052-20264101	9qA3	Mus musculus zinc finger protein 26 (Zfp26), mRNA. XM_974728 XM_977451 XM_977486	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	5033428C05Rik; KRAB15; mszf52; Zfp81-rs1; KIAA4196; Zfp-26; mkr-3; mszf14; Zfp70; mKIAA4196	5033428C05Rik; KRAB15; mszf52; Zfp81-rs1; KIAA4196; Zfp-26; mkr-3; mszf14; Zfp70; mKIAA4196
Mus musculus	RefSeq	ILMN_203461	ILMN_225632	ZFP26	NM_011753.2	NM_011753.2		22688	141801412	NM_011753.2	Zfp26	NP_035883.1	ILMN_1248488	006980685	S	2303	GGCCGTTCTTGGCTAACCATACACTTACGGAAACATACTGGAGAGAGGCC	9	-	20242178-20242227	9qA3	Mus musculus zinc finger protein 26 (Zfp26), mRNA. XM_974728 XM_977451 XM_977486	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	5033428C05Rik; KRAB15; mszf52; Zfp81-rs1; KIAA4196; Zfp-26; mkr-3; mszf14; Zfp70; mKIAA4196	5033428C05Rik; KRAB15; mszf52; Zfp81-rs1; KIAA4196; Zfp-26; mkr-3; mszf14; Zfp70; mKIAA4196
Mus musculus	Riken	ILMN_205814	ILMN_205814	A430023D23RIK	ri|A430023D23|PX00134J10|AK039868|2363					AK039868	A430023D23Rik		ILMN_2575417	002030563	S	1424	GGCCAGCAGAGTCAGTGAGATGTTAGAGAGCTATTGGGCTACCTGATGTC										
Mus musculus	RefSeq	ILMN_200202	ILMN_200202	LOC385933	XM_359003.1	XM_359003.1			38080896	XM_359003.1	LOC385933		ILMN_1220964	005220494	S	1065	AAAAAACCAATACAAGAACAGGAACAACGCCCTAGAAAAAACAAGAAGGT										
Mus musculus	RefSeq	ILMN_225825	ILMN_225825	EG622139	NM_001039222.1	NM_001039222.1		622139	85986614	NM_001039222.1	EG622139	NP_001034311.1	ILMN_2800840	000270543	S	143	GACACAGAGAAGGAAAGGCCTCTGGGCAACCAGGCTAGAAGGATGGCAAC	3	-	144552701-144552709:144552710-144552750	3qH2	Mus musculus predicted gene, EG622139 (EG622139), mRNA.					
Mus musculus	RefSeq	ILMN_223472	ILMN_223472	4930511I11RIK	NM_026290.2	NM_026290.2		67645	141802254	NM_026290.2	4930511I11Rik	NP_080566.1	ILMN_1212782	004230603	S	1011	CGACCTAGCCATTCCTGCTTTAAAACCGGGAAGTGAAGTTAAGGAGATCC	17	+	28669325-28669374	17qA3.3	Mus musculus RIKEN cDNA 4930511I11 gene (4930511I11Rik), mRNA.				AV041658	AV041658
Mus musculus	MEEBO	ILMN_223982	ILMN_223982	OLFR1247	scl4272.1.1_320				22128998	NM_146966	Olfr1247		ILMN_2772592	002260070	S	879	AAATTCTATGGGAAAGCTCTGGAGTAAAATGATAAGTATAGATAGAGTAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	Riken	ILMN_204659	ILMN_204659	9330209K13RIK	ri|9330209K13|PX00107F04|AK034511|2152					AK034511	9330209K13Rik		ILMN_2566662	006520008	S	1490	GGTTCTTTCCTTTTCCTGGGGTTTAAAGTCAGGTCATTGGGCTTGGTGGC										
Mus musculus	RefSeq	ILMN_221181	ILMN_221181	OLFR401	NM_146706.1	NM_146706.1		258701	22129424	NM_146706.1	Olfr401	NP_666917.1	ILMN_2732017	002810730	S	500	CCACACTTCGCTTCTGTGGTCCCAATGTGATTGACAACTTCTACTGCGAC	11	+	73930301-73930350	11qB4	Mus musculus olfactory receptor 401 (Olfr401), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-221M24.6; MOR255-6	RP23-221M24.6; MOR255-6
Mus musculus	RefSeq	ILMN_212417	ILMN_328532	LOC100044124	XM_001474702.1	XM_001474702.1		100044124	149253961	XM_001474702.1	LOC100044124	XP_001474752.1	ILMN_2626190	003710458	S	6896	CTTCCGTGGTCAGGTGATGAACCTGCTTTGTTGAATTCCCCCTCTGTCTC	5	+	66216080-66216129		PREDICTED: Mus musculus similar to Nedd4 binding protein 2 (LOC100044124), mRNA.					
Mus musculus	RefSeq	ILMN_192265	ILMN_314074	LOC100046056	XM_001475483.1	XM_001475483.1		100046056	149251562	XM_001475483.1	LOC100046056	XP_001475533.1	ILMN_2679937	006760692	S	1940	CAGGCGACGATGATGAAGTGGATGACTTTGAGGACTTTGTCTTCGGCCAC					PREDICTED: Mus musculus similar to Pre-B-cell leukemia transcription factor interacting protein 1 (LOC100046056), mRNA.					
Mus musculus	RefSeq	ILMN_219844	ILMN_219844	NAT13	NM_028108.3	NM_028108.3		72117	133892288	NM_028108.3	Nat13	NP_082384.1	ILMN_2714290	002320204	S	3905	TAGGCTTTATTCTAGTGAGTATGAACTGTAAATGTGCATATTCTGATCTA	16	+	44162856-44162905	16qB4	Mus musculus N-acetyltransferase 13 (Nat13), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The acetylation of the N-terminal amino acid of proteins [goid 6474] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW112078; Mak3; Mak3p; 2810441M03Rik; 2600005K24Rik	AW112078; Mak3; Mak3p; 2810441M03Rik; 2600005K24Rik
Mus musculus	RefSeq	ILMN_209696	ILMN_209696	LIN7B	NM_011698.1	NM_011698.1		22342	6755970	NM_011698.1	Lin7b	NP_035828.1	ILMN_2598318	001260142	S	656	CCTCCCCTGTACAGTATTATTTATTGTCACTGGCTCCTTATTTAAAGATC	7	-	52623271-52623320	7qB4	Mus musculus lin-7 homolog B (C. elegans) (Lin7b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LIN-7B; MALS-2; Veli2	LIN-7B; MALS-2; Veli2
Mus musculus	RefSeq	ILMN_209696	ILMN_209696	LIN7B	NM_011698.1	NM_011698.1		22342	6755970	NM_011698.1	Lin7b	NP_035828.1	ILMN_1260389	002000458	S	296	CGAAGACTGATGAGGGTTTGGGCTTCAACATCATGGGTGGCAAGGAGCAG	7	-	52624609-52624658	7qB4	Mus musculus lin-7 homolog B (C. elegans) (Lin7b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LIN-7B; MALS-2; Veli2	LIN-7B; MALS-2; Veli2
Mus musculus	RefSeq	ILMN_209696	ILMN_209696	LIN7B	NM_011698.1	NM_011698.1		22342	6755970	NM_011698.1	Lin7b	NP_035828.1	ILMN_2853035	006760014	S	348	CTCACCCATCTATATCTCTCGAGTCATCCCTGGGGGCGTGGCTGATCGCC	7	-	52624557-52624606	7qB4	Mus musculus lin-7 homolog B (C. elegans) (Lin7b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LIN-7B; MALS-2; Veli2	LIN-7B; MALS-2; Veli2
Mus musculus	RefSeq	ILMN_209696	ILMN_209696	LIN7B	NM_011698.1	NM_011698.1		22342	6755970	NM_011698.1	Lin7b	NP_035828.1	ILMN_2602230	005420767	S	166	TATGAACAGCTCTATGACACGCTGGACATCACTGGCAGCGCCGAGGTGCG	7	-	52625303-52625352	7qB4	Mus musculus lin-7 homolog B (C. elegans) (Lin7b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LIN-7B; MALS-2; Veli2	LIN-7B; MALS-2; Veli2
Mus musculus	RefSeq	ILMN_199424	ILMN_235593	LDB3	NM_001039073.2	NM_001039073.2		24131	122056487	NM_001039073.2	Ldb3	NP_001034162.1	ILMN_2713622	005310619	S	1807	GCGATTTCCCTGTGGAAGCTGGTGACAAGTTTATCGAGGCCCTGGGGCAC	14	-	35349780-35349829	14qB	Mus musculus LIM domain binding 3 (Ldb3), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with protein kinase C [goid 5080] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271
Mus musculus	RefSeq	ILMN_201577	ILMN_201577	PNMA1	XM_127024.3	XM_127024.3			38050560	XM_127024.3	Pnma1		ILMN_2670950	001340682	S	2111	GGCCTTTACCGAGCTGCACAATCAGTTCCTCACGGTGGAAGACAGAAGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	Riken	ILMN_205857	ILMN_205857	A830093I24RIK	ri|A830093I24|PX00156O20|AK044133|1282					AK044133	A830093I24Rik		ILMN_1221166	006900059	S	935	TCTTATGTGGCTCCTTGCTCACAGGCAGTGGCACTTTCACTTAAGCACGC										
Mus musculus	RefSeq	ILMN_212050	ILMN_212050	PNMA2	NM_175498.3	NM_175498.3		239157	41055909	NM_175498.3	Pnma2	NP_780707.1	ILMN_2622190	007040386	S	4229	GCCTGACTCCACGTGGCATTATGTTCCTGGGAATAGCTTTGCCGTTGTAC	14	+	67538778-67538827	14qD1	Mus musculus paraneoplastic antigen MA2 (Pnma2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			A830049P17Rik; mKIAA0883; KIAA0883	A830049P17Rik; mKIAA0883; KIAA0883
Mus musculus	Riken	ILMN_206047	ILMN_206047	HMG20A	ri|D130064I03|PX00185M22|AK051678|3171					AK051678	Hmg20a		ILMN_1235497	001690131	S	2960	AGTTCCAGACCAGCATGTCCCACCTAGAGAACTCCCTGACAGCCTGAGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190794	ILMN_321048	LOC100042773	XM_001478799.1	XM_001478799.1		100042773	149263966	XM_001478799.1	LOC100042773	XP_001478849.1	ILMN_2643423	004590504	S	1164	CTCTTGGTCCTTAGATGAAATGTTTACATAGCTTCTGGTGATATCCTTCA	13	-	36082209-36082258	13qA3.3	PREDICTED: Mus musculus similar to transmembrane emp24 domain-containing protein 10 (LOC100042773), mRNA.					
Mus musculus	RefSeq	ILMN_216528	ILMN_216528	OLFR1097	NM_146843.1	NM_146843.1		258840	22129176	NM_146843.1	Olfr1097	NP_667054.1	ILMN_2791018	006590543	S	437	CTGTGTCCTACATGATTGGAGTTTTGGATTCCTCTGTCACTGTCTTTTGC	2	-	86730844-86730893	2qD	Mus musculus olfactory receptor 1097 (Olfr1097), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123667; MGC123726; MOR206-2	MGC123667; MGC123726; MOR206-2
Mus musculus	Riken	ILMN_206000	ILMN_206000	2900052M09RIK	ri|2900052M09|ZX00083F03|AK028243|753					AK028243	2900052M09Rik		ILMN_2576800	002600020	S	520	CATGGGGCCTGTCAGATAGCCTGGAGTCCATCTCTCAAGAGAGCTGATTC										
Mus musculus	RefSeq	ILMN_197601	ILMN_197601	LOC333855	XM_289961.1	XM_289961.1			28481228	XM_289961.1	LOC333855		ILMN_2528702	001340377	S	1	ATGCATTCCTTACATGTTTCACTAGTGTTCCTCTGGCTTCAACTAGGTGG										
Mus musculus	RefSeq	ILMN_218421	ILMN_218421	OTP	NM_011021.3	NM_011021.3		18420	146134515	NM_011021.3	Otp	NP_035151.1	ILMN_1227598	001090072	S	843	CAGTCGCTGTCCCAGTGCAGCCTGGCGGCCGGGCCACCGCCCAACTCCAT				13qD1	Mus musculus orthopedia homolog (Drosophila) (Otp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The differentiation of cells that will contribute to the structure and function of the hypothalamus [goid 21979] [evidence IMP]; The progression of the neurohypophysis over time from its initial formation until its mature state. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation [goid 21985] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190476	ILMN_190476	BC059177	scl23651.2_563				38016186	NM_198248	BC059177		ILMN_1243330	000940372	S	2	GTGGCCTTGAGCAATCCATCCCTCCATTCACCTTTCCCCTAATCACGTTG										
Mus musculus	MEEBO	ILMN_214756	ILMN_214756	LOC384412	IGKV4-63_AJ231211_Ig_kappa_variable_4-63_281	XM_357630.1			38084336	XM_357630.1	LOC384412		ILMN_2651595	007550706	S	529	GCAGCATGGAGGCTGAAGATGTTGCCACTTATTACTGTTTTCAGGGGAGT										
Mus musculus	Riken	ILMN_203233	ILMN_203233	FUT9	ri|C330004C19|PX00075F10|AK049122|1692					AK049122	Fut9		ILMN_1245775	002140468	S	414	TCCTGAGCCATCTCTGCATCACTGAGATAAAGTCTACTTGGTCGTGGTGG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha(1,3)-linkage [goid 46920] [evidence IDA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211947	ILMN_211947	CAPS2	NM_178278.2	NM_178278.2		353025	31342157	NM_178278.2	Caps2	NP_840062.1	ILMN_2779592	001400669	S	2654	GTGTAAAGAACAAAATGTAGGAACCTTGGAGTGTACAAATGTTCCCTTAG	10	+	111620481-111620530	10qD2	Mus musculus calcyphosphine 2 (Caps2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	D630005B03Rik	D630005B03Rik
Mus musculus	RefSeq	ILMN_210188	ILMN_259770	HRNR	XM_001000796.1	XM_001000796.1		68723	94369753	XM_001000796.1	Hrnr	XP_001000796.1	ILMN_2603101	002360603	S	10275	CAGATGCATATTCCCAGCCAATGGAAAAGTGGTGCAGGAGCAAAGGATCC	3	+	93137162-93137211	3qF2.1	PREDICTED: Mus musculus hornerin (Hrnr), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IDA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	MEEBO	ILMN_218308	ILMN_218308	CCL6	scl39817.6_54	NM_009139.1			6677882	NM_009139.1	Ccl6		ILMN_2694179	007040717	S	858	CATAGAACTACGGGGCCAGTCTGAAACTGGGCTCTTGGGGTGAAATTATC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184838	ILMN_310044	LOC100040353	XM_001474539.1	XM_001474539.1		100040353	149250844	XM_001474539.1	LOC100040353	XP_001474589.1	ILMN_2422014	001850603	S	1105	TTGTCTGCGGGTCTTTTGGGAAGGTTTGATGGATCAGTTCTCATTGCGCG	3	-	21974617-21974666	3qA3	PREDICTED: Mus musculus similar to splicing coactivator subunit SRm300 (LOC100040353), mRNA.					
Mus musculus	Riken	ILMN_205232	ILMN_205232	E130319J22RIK	ri|E130319J22|PX00209K18|AK053901|1391					AK053901	E130319J22Rik		ILMN_1257882	005670609	S	275	TGGCGGACCAGCGGGCGAGGACCCTGTTTGAATGGGCCTGGCAACATCCT										
Mus musculus	RefSeq	ILMN_208688	ILMN_208688	PLEKHM1	NM_183034.1	NM_183034.1		353047	33942119	NM_183034.1	Plekhm1	NP_898855.1	ILMN_1248495	005670632	S	1123	CCCTCTCCCTCCATAGCCTAGCTACCAGCACACACCTGCACTTTGAGGGA	11	-	103248523-103248572	11qE1	Mus musculus pleckstrin homology domain containing, family M (with RUN domain) member 1 (Plekhm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	B2; BC038943; D330036J23Rik; AP162	B2; BC038943; D330036J23Rik; AP162
Mus musculus	RefSeq	ILMN_208688	ILMN_208688	PLEKHM1	NM_183034.1	NM_183034.1		353047	33942119	NM_183034.1	Plekhm1	NP_898855.1	ILMN_2737959	004610753	S	5059	GCAGTGCAGAGGAGAAACTGCTGCTGTGTGGTATTTGAGTGATTTTGCAG	11	-	103226425-103226474	11qE1	Mus musculus pleckstrin homology domain containing, family M (with RUN domain) member 1 (Plekhm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	B2; BC038943; D330036J23Rik; AP162	B2; BC038943; D330036J23Rik; AP162
Mus musculus	RefSeq	ILMN_214617	ILMN_214617	FAM60A	NM_019643.3	NM_019643.3		56306	118130638	NM_019643.3	Fam60a	NP_062617.2	ILMN_2649929	001580706	S	2549	ATCTGTTTTGTACTTTTTATACTGTTGGATACTTATAATCAAAACTTTAC	6	-	148869620-148869669	6qG3	Mus musculus family with sequence similarity 60, member A (Fam60a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_220156	ILMN_220156	SEMA4G	NM_011976.1	NM_011976.1		26456	6755461	NM_011976.1	Sema4g	NP_036106.1	ILMN_2718314	005810253	S	4095	AGAACGTGGAACCCCACGAGTTTTTACTGTCCTTCACCCATACCTCTCCC	19	+	45077677-45077726	19qC3	Mus musculus sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G (Sema4g), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		AW554132; AI507908	AW554132; AI507908
Mus musculus	RefSeq	ILMN_184176	ILMN_184176	USP37	NM_176972.3	NM_176972.3		319651	142367967	NM_176972.3	Usp37	NP_795946.1	ILMN_2416488	005490035	S	3495	CGCATCTATAGCTGATTATCCTCTTTTTCTTCTACAAGAGTGCCGCTTCC	1	-	74485735-74485784	1qC3	Mus musculus ubiquitin specific peptidase 37 (Usp37), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	4932415L06Rik; C330008N13Rik	4932415L06Rik; C330008N13Rik
Mus musculus	RefSeq	ILMN_194443	ILMN_247433	IVD	NM_019826.3	NM_019826.3		56357	118130613	NM_019826.3	Ivd	NP_062800.1	ILMN_2728379	005340228	S	1811	ACACAGAAGATCGGCTCCCTCGTGTACCTGAGTCTGTCTGCATCACTCTG	2	+	118706837-118706886	2qE5	Mus musculus isovaleryl coenzyme A dehydrogenase (Ivd), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 3-methylbutanoyl-CoA + ETF = 3-methylbut-2-enoyl-CoA + reduced ETF [goid 8470] [evidence IEA]	AI463340; 6720455E18Rik; 1300016K07Rik	AI463340; 6720455E18Rik; 1300016K07Rik
Mus musculus	MEEBO	ILMN_195527	ILMN_195527	SSR1	scl44079.8_35				31982665	NM_025965	Ssr1		ILMN_2516383	007000497	S	13	GGGAGGTGGAGGGACTACTACACTTAAAAGCTGCCACGTCGTCATCCCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194765	ILMN_194765	A930005H10RIK	scl068161.2_48						A930005H10Rik		ILMN_1250135	002630497	S	11	CCGACCCCGCGTTTGCTCAGCTTTGAATTCCCGCTCTGTAGATCTGTCGC										
Mus musculus	RefSeq	ILMN_208622	ILMN_251122	H2-K1	NM_001001892.2	NM_001001892.2		14972	133922587	NM_001001892.2	H2-K1	NP_001001892.2	ILMN_2588139	003780736	S	1453	CTGCAACTCCTCACTTCCACACTGAGAATAATAATTTGAATGTAACCTTG	17	-	34134560-34134609	17qB1	Mus musculus histocompatibility 2, K1, K region (H2-K1), transcript variant 1, mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 42590] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IDA]	Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IDA]	MHC I; MGC7052; H2-K; H-2K; H-2K(d)	MHC I; MGC7052; H2-K; H-2K; H-2K(d)
Mus musculus	RefSeq	ILMN_240633	ILMN_240633	TNFSF12-TNFSF13	NM_001034097.1	NM_001034097.1		619441	77539771	NM_001034097.1	Tnfsf12-tnfsf13	NP_001029269.1	ILMN_3101392	006100220	A	852	TCCTGGGCCCCAGCTCCGTTTGTGCCAGACAGAGCTGCAAAGCCTAAGGC	11	-	69498610-69498632:69500459-69500485	11qB3	Mus musculus tumor necrosis factor (ligand) superfamily, member 12-member 13 (Tnfsf12-tnfsf13), transcript variant 1, mRNA.					
Mus musculus	RefSeq	ILMN_192878	ILMN_240633	TNFSF12-TNFSF13	NM_001034097.1	NM_001034097.1		619441	77539771	NM_001034097.1	Tnfsf12-tnfsf13	NP_001029269.1	ILMN_2492170	002340543	S	1594	CCCGCTCCCACTATCTGGGCTTTGACTCCATGGATATTAAAAAAGTAGAA	11	-	69496569-69496618	11qB3	Mus musculus tumor necrosis factor (ligand) superfamily, member 12-member 13 (Tnfsf12-tnfsf13), transcript variant 1, mRNA.					
Mus musculus	Riken	ILMN_201823	ILMN_201823	2610303A01RIK	ri|2610303A01|ZX00062E03|AK011969|693					AK011969	2610303A01Rik		ILMN_2544867	000650673	S	613	GGCCAAGCAAACCGGGCCATAGTTCACGTGGAGATGTGAAAGCCGACAGC								Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186574	ILMN_222285	IVNS1ABP	NM_054102.2	NM_054102.2		117198	87239989	NM_054102.2	Ivns1abp	NP_473443.2	ILMN_1230799	003710717	S	3385	GGCTCGGTGTCTGTGTAGTGCTACACCTAATTTATGGTGCCCAAATGAGC	1	+	153211447-153211496	1qG2	Mus musculus influenza virus NS1A binding protein (Ivns1abp), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700126I16Rik; Nd1-L; 1190004M08Rik; Nd1-S; NS1-BP; NS-1; ND1; HSPC068; AA960440; mKIAA0850	1700126I16Rik; Nd1-L; 1190004M08Rik; Nd1-S; NS1-BP; NS-1; ND1; HSPC068; AA960440; mKIAA0850
Mus musculus	RefSeq	ILMN_222285	ILMN_222285	IVNS1ABP	NM_054102.2	NM_054102.2		117198	87239989	NM_054102.2	Ivns1abp	NP_473443.2	ILMN_2747456	002570008	S	2197	GGTGGCTTTGATGGTTCTCACGCCATCAGTTGTGTGGAGATGTATGATCC	1	+	153210259-153210308	1qG2	Mus musculus influenza virus NS1A binding protein (Ivns1abp), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700126I16Rik; Nd1-L; 1190004M08Rik; Nd1-S; NS1-BP; NS-1; ND1; HSPC068; AA960440; mKIAA0850	1700126I16Rik; Nd1-L; 1190004M08Rik; Nd1-S; NS1-BP; NS-1; ND1; HSPC068; AA960440; mKIAA0850
Mus musculus	RefSeq	ILMN_199922	ILMN_199922	LOC384069	XM_357401.1	XM_357401.1			38078993	XM_357401.1	LOC384069		ILMN_2536969	005290152	S	288	GACCCAGTGTGTGCCTGCCAAGTGTGTGCTGACCCAGTATGTGCTTGTTC										
Mus musculus	Riken	ILMN_206560	ILMN_206560	D630035L11RIK	ri|D630035L11|PX00318K13|AK085503|2284					AK085503	D630035L11Rik		ILMN_1225797	001410092	S	1291	TGAAACCCAAGAAGGAGGCATCAGAGGTCTCCAGTACAGCGCAGTCCAGG										
Mus musculus	RefSeq	ILMN_209750	ILMN_209750	RANBP1	NM_011239.1	NM_011239.1		19385	6755283	NM_011239.1	Ranbp1	NP_035369.1	ILMN_1248082	006400553	S	982	TTTTTCCATAGTGGAACACATTATTTTATAGTAATAAAAAAGATCTTTGA	16	-	18241964-18241966:18241982-18242028	16qA3	Mus musculus RAN binding protein 1 (Ranbp1), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances within a cell [goid 46907] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of centrosome separation [goid 46604] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	Htf9a	Htf9a
Mus musculus	RefSeq	ILMN_191555	ILMN_191555	EIF4H	NM_033561.1	NM_033561.1		22384	15808987	NM_033561.1	Eif4h	NP_291039.1	ILMN_1243395	001110364	S	2247	ATGCGGAAAAGACAGGCCCGTCCATCCACATTGCTGGGCACCCAGCTGAC	5	-	135096963-135097012	5qG2	Mus musculus eukaryotic translation initiation factor 4H (Eif4h), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AU018978; D5Ertd355e; mKIAA0038; Wscr1; Wbscr1; E430026L18Rik; Ef4h	AU018978; D5Ertd355e; mKIAA0038; Wscr1; Wbscr1; E430026L18Rik; Ef4h
Mus musculus	RefSeq	ILMN_211913	ILMN_211913	RPL41	NM_018860.3	NM_018860.3		67945	142365971	NM_018860.3	Rpl41	NP_061348.1	ILMN_2620695	007160373	S	198	TGCTGCCATCGGTAATGAGTCTCAGTAGACCTGGAACGTCACCTCGCCGC	17	-	127985315-127985364	10qD3	Mus musculus ribosomal protein L41 (Rpl41), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	1810055P16Rik	1810055P16Rik
Mus musculus	MEEBO	ILMN_186543	ILMN_186543	IGL-5	scl016136.1_234						Igl-5		ILMN_2436424	007380619	S	11	GAGTGTTCTTAGACCACAATCCTCCCTGAAGCCTCAGGGGCCTGGATCTG										
Mus musculus	RefSeq	ILMN_223381	ILMN_223381	LYSMD1	NM_153121.1	NM_153121.1		217779	23821020	NM_153121.1	Lysmd1	NP_694761.1	ILMN_1238939	006180292	S	2281	CCGGTTCAGGAGTGGGAATAAGTGTTGTTTCTAGACCTCTCCTCTATGTT	3	+	94943349-94943398	3qF2.1	Mus musculus LysM, putative peptidoglycan-binding, domain containing 1 (Lysmd1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		2610022K04Rik; MGC38837; AI415311	2610022K04Rik; MGC38837; AI415311
Mus musculus	RefSeq	ILMN_223381	ILMN_223381	LYSMD1	NM_153121.1	NM_153121.1		217779	23821020	NM_153121.1	Lysmd1	NP_694761.1	ILMN_3142193	006940292	A	2235	AGTGATGAAATAGGCATGGCGGCACAGTAGTCCTGGGAGTCTGTCTCCGG	3	+	94943303-94943352	3qF2.1	Mus musculus LysM, putative peptidoglycan-binding, domain containing 1 (Lysmd1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		2610022K04Rik; MGC38837; AI415311	2610022K04Rik; MGC38837; AI415311
Mus musculus	RefSeq	ILMN_197826	ILMN_197826	LOC242627	XM_144002.2	XM_144002.2			38078652	XM_144002.2	LOC242627		ILMN_1229050	002140731	S	789	CGATAAGCTGTGTGAGGATCTACAATCTGAAGATAAGCCATTTGTGCAGC										
Mus musculus	MEEBO	ILMN_224055	ILMN_224055	FGL1	scl34887.7.1_10				21704195	NM_145594	Fgl1		ILMN_1242370	007330653	S	871	ACTACCGTGGTTCCTACAGGGCAGAAACGGATAATGGTGTTGTGTGGTAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	RefSeq	ILMN_226829	ILMN_226829	GCNT7	NM_001039560.3	NM_001039560.3		654821	146198564	NM_001039560.3	Gcnt7	NP_001034649.1	ILMN_3161657	007210390	S	2051	CACCCTGGTGTATGGGCTGAAGACATAAAAGGCCATGACCATCTTGGGCC				2qH3	Mus musculus glucosaminyl (N-acetyl) transferase family member 7 (Gcnt7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IEA]	A330041C17Rik; RP23-228E2.6	A330041C17Rik; RP23-228E2.6
Mus musculus	RefSeq	ILMN_199559	ILMN_199559	LOC383642	XM_357168.1	XM_357168.1			38074307	XM_357168.1	LOC383642		ILMN_2535659	006620497	S	547	GAGCGAGGACCTTCCTCCTTGGGATCCTCAGAAGTCTACTGGGCACAGAA										
Mus musculus	RefSeq	ILMN_200474	ILMN_200474	LOC384313	XM_357563.1	XM_357563.1			38082401	XM_357563.1	LOC384313		ILMN_2538888	002810204	S	464	GGAAAAGGAGACCCAACGTTCAGGTAACGGTGACTGAAGGTAGACAGCAG										
Mus musculus	RefSeq	ILMN_219508	ILMN_219508	ACNAT2	NM_145368.2	NM_145368.2		209186	31981759	NM_145368.2	Acnat2	NP_663343.2	ILMN_2709810	007000630	S	901	TGGGCCCACCACCATCACAATCTTCCCACTAAGATACCAGGATCTGGTGA	4	-	49393425-49393474	4qB1	Mus musculus acyl-coenzyme A amino acid N-acyltransferase 2 (Acnat2), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219508	ILMN_219508	ACNAT2	NM_145368.2	NM_145368.2		209186	31981759	NM_145368.2	Acnat2	NP_663343.2	ILMN_2858121	006290647	S	1380	GCAAACTCTAAATAGTGTGTAAAGTGCCAGAGTAAAGTGCAGGGAGTGCT	4	-	49392946-49392985:49392986-49392995	4qB1	Mus musculus acyl-coenzyme A amino acid N-acyltransferase 2 (Acnat2), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215946	ILMN_215946	RIN3	NM_177620.3	NM_177620.3		217835	141801790	NM_177620.3	Rin3	NP_808288.1	ILMN_2665545	001990204	S	3780	TGTGATGGAAACACCACAGGTCATCAGTGTTGATGAGATGCACTATGGGG	12	+	103628979-103629028	12qE	Mus musculus Ras and Rab interactor 3 (Rin3), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C86933; 6430500K07	C86933; 6430500K07
Mus musculus	RefSeq	ILMN_194560	ILMN_235826	KMO	NM_133809.1	NM_133809.1		98256	19527029	NM_133809.1	Kmo	NP_598570.1	ILMN_1224155	006560717	S	2305	CAAATTGGCATTTCCCATAATGTCAAAGACATCCTTGGGTCTTAACAATC	1	+	177590791-177590840	1qH4	Mus musculus kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) (Kmo), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-kynurenine + NADPH + H+ + O2 = 3-hydroxy-L-kynurenine + NADP+ + H2O [goid 4502] [evidence IEA]	AI046660	AI046660
Mus musculus	RefSeq	ILMN_213324	ILMN_213324	PLXNA4	NM_175750.2	NM_175750.2		243743	31343440	NM_175750.2	Plxna4	NP_786926.1	ILMN_2635986	007570240	S	6958	GCCCCATGCATCAATGGCAGGGCTCAGAAAGGATGAGGAGCTGAGGACAG	6	-	32100137-32100186	6qA3.3	Mus musculus plexin A4 (Plxna4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 17154] [evidence IGI]	mKIAA1550; 9330117B14; KIAA1550	mKIAA1550; 9330117B14; KIAA1550
Mus musculus	RefSeq	ILMN_209897	ILMN_209897	ANTXRL	NM_172808.2	NM_172808.2		239029	120407059	NM_172808.2	Antxrl	NP_766396.2	ILMN_2600236	006860673	S	1788	GTTTTCACCTTGCAGAACCACCATACCCCACAAGGATTGTCTTTCAACCC	14	+	34888847-34888896	14qB	Mus musculus anthrax toxin receptor-like (Antxrl), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1700112N15Rik; 4933430J11	1700112N15Rik; 4933430J11
Mus musculus	Riken	ILMN_206467	ILMN_206467	D330008E13RIK	ri|D330008E13|PX00191O11|AK084499|2095					AK084499	D330008E13Rik		ILMN_1260405	005560022	S	1770	GTAATGATACTGTCGTCCTTGGGCTCTGGGGAAGTAGGAGTCACGAGTGC										
Mus musculus	RefSeq	ILMN_214417	ILMN_214417	RAB13	NM_026677.3	NM_026677.3		68328	146149110	NM_026677.3	Rab13	NP_080953.1	ILMN_2647793	006370564	S	438	TGGGAAACAAGTGTGACATGGAGGCCAAGCGGCAGGTGCAGAGAGAGCAG				3qF1	Mus musculus RAB13, member RAS oncogene family (Rab13), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	B230212B15Rik; 0610007N03Rik	B230212B15Rik; 0610007N03Rik
Mus musculus	RefSeq	ILMN_209309	ILMN_209309	CUGBP2	NM_010160.2	NM_010160.2		14007	124286790	NM_010160.2	Cugbp2	NP_034290.2	ILMN_2594575	007320593	S	3512	CACCTTTTGCTGAACTGACTCACAGTTAGACAATCCATGGTTTAATGCAC	2	-	6466045-6466094	2qA1	Mus musculus CUG triplet repeat, RNA binding protein 2 (Cugbp2), transcript variant 6, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	B230345P09Rik; Napor; Napor-2; C88023; ETR-3; B230218O03	B230345P09Rik; Napor; Napor-2; C88023; ETR-3; B230218O03
Mus musculus	RefSeq	ILMN_209309	ILMN_209309	CUGBP2	NM_010160.2	NM_010160.2		14007	124286790	NM_010160.2	Cugbp2	NP_034290.2	ILMN_1252673	006100523	S	6541	TTGCTGTTTAGATCGAAGTTTTTTCTGACCCTTCTGTCCTCATTGTGAAC	2	-	6463016-6463065	2qA1	Mus musculus CUG triplet repeat, RNA binding protein 2 (Cugbp2), transcript variant 6, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	B230345P09Rik; Napor; Napor-2; C88023; ETR-3; B230218O03	B230345P09Rik; Napor; Napor-2; C88023; ETR-3; B230218O03
Mus musculus	RefSeq	ILMN_215574	ILMN_209309	CUGBP2	NM_010160.2	NM_010160.2		14007	124286790	NM_010160.2	Cugbp2	NP_034290.2	ILMN_2661197	002510168	S	8588	CTATCGAGTGAAAATGGTATCTTAACAAAATCTATGCACTTGCTATCAGG	2	-	6460969-6461018	2qA1	Mus musculus CUG triplet repeat, RNA binding protein 2 (Cugbp2), transcript variant 6, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	B230345P09Rik; Napor; Napor-2; C88023; ETR-3; B230218O03	B230345P09Rik; Napor; Napor-2; C88023; ETR-3; B230218O03
Mus musculus	RefSeq	ILMN_215486	ILMN_215486	5730419I09RIK	NM_029081.1	NM_029081.1		74741	30794171	NM_029081.1	5730419I09Rik	NP_083357.1	ILMN_1255734	000460427	S	313	AGACAGATGTGTATCTCAAGTCACTGAATCCTCAGTGGAACTCGGAGTGG	6	-	143039130-143039179	6qG3	Mus musculus RIKEN cDNA 5730419I09 gene (5730419I09Rik), mRNA.				C030008B15Rik	C030008B15Rik
Mus musculus	RefSeq	ILMN_215486	ILMN_215486	5730419I09RIK	NM_029081.1	NM_029081.1		74741	30794171	NM_029081.1	5730419I09Rik	NP_083357.1	ILMN_2889313	001740020	S	3743	GTCTAGAAGAGGCTTGGCTCCAACAGGGGAGAGACTGCTGTGGAATGTAT	6	-	142959811-142959860	6qG3	Mus musculus RIKEN cDNA 5730419I09 gene (5730419I09Rik), mRNA.				C030008B15Rik	C030008B15Rik
Mus musculus	RefSeq	ILMN_231578	ILMN_231578	OLFR209	NM_207551.1	NM_207551.1		404311	46430561	NM_207551.1	Olfr209	NP_997434.1	ILMN_2941805	003800497	S	844	CCTCTGCTAAACCCCTTCATTTACAGCCTCAGAAATAAAGAAGTCATCGG					Mus musculus olfactory receptor 209 (Olfr209), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR182-6	MOR182-6
Mus musculus	RefSeq	ILMN_220376	ILMN_231578	OLFR209	NM_207551.1	NM_207551.1		404311	46430561	NM_207551.1	Olfr209	NP_997434.1	ILMN_1228888	003180494	S	540	CCTGCCACTTTATAGAATTTCTTGCACTGACCCATCTATCAATGTACTGG					Mus musculus olfactory receptor 209 (Olfr209), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR182-6	MOR182-6
Mus musculus	MEEBO	ILMN_189265	ILMN_189265	E330013K21RIK	scl52607.7.1_47				34594660	NM_175459	E330013K21Rik		ILMN_1236293	006580424	S	2203	CTTCCTTTGAGGACTGCCTGGTCCCCACGTCCATGGGTCAAGCCGGTTTT										
Mus musculus	RefSeq	ILMN_197081	ILMN_238395	GM528	XM_986482.1	XM_986482.1		217951	94394601	XM_986482.1	Gm528	XP_991576.1	ILMN_2526840	002940537	S	1331	GAGGCAGGAGAAGCTGAAGACCTGGGAGTAGCAGTTAAAATGGCTCTTGG				12qF2	PREDICTED: Mus musculus gene model 528, (NCBI), transcript variant 2 (Gm528), mRNA.					
Mus musculus	RefSeq	ILMN_219939	ILMN_219939	RLBP1	NM_020599.1	NM_020599.1		19771	10181109	NM_020599.1	Rlbp1	NP_065624.1	ILMN_2848906	004230170	S	1572	GATCTTAACAGCAGTAGGCAGATAAGGGGTTTCCCACCCAGGATTCCAGG	7	-	86520004-86520053	7qD3	Mus musculus retinaldehyde binding protein 1 (Rlbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	Interacting selectively with 11-cis retinal, an isomer of retinal that plays an important role in the visual process in most vertebrates. 11-cis retinal combines with opsin in the rods (scotopsin) to form rhodopsin or visual purple. Retinal is one of the three compounds that makes up vitamin A [goid 5502] [evidence IDA]; Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	3110056M11Rik; CRALBP	3110056M11Rik; CRALBP
Mus musculus	RefSeq	ILMN_214884	ILMN_214884	PRKAB1	NM_031869.2	NM_031869.2		19079	118130748	NM_031869.2	Prkab1	NP_114075.1	ILMN_2653081	002760241	S	1719	GTGCTCCTCAGCTGGGGACCTGCATCTCTAGTGAGCAGAGAGTATCACGG	5	-	116463881-116463930	5qF	Mus musculus protein kinase, AMP-activated, beta 1 non-catalytic subunit (Prkab1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of AMP [goid 4679] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E430008F22; 1300015D22Rik; AU021155	E430008F22; 1300015D22Rik; AU021155
Mus musculus	RefSeq	ILMN_257374	ILMN_257374	DEAR1	NM_001040461.1	NM_001040461.1		654362	94818704	NM_001040461.1	Dear1	NP_001035551.1	ILMN_2953006	002230377	S	394	CATGTTTGAGCAGTGGAACCATGGGCAGAAGCCACTGAAGCGACTGCAGG	3	-	84769059-84769068:84769069-84769108	3qF1	Mus musculus dual endothelin 1/angiotensin II receptor 1 homolog (rat) (Dear1), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Dear	Dear
Mus musculus	RefSeq	ILMN_221443	ILMN_221443	OLFR17	NM_020598.1	NM_020598.1		18314	10181105	NM_020598.1	Olfr17	NP_065623.1	ILMN_1242884	005080682	S	640	TTGATTCTGGGTTCCTATGTCCGCATCCTCTCTACCATCTTTAGGATGCC	7	+	114241620-114241669	7qE3	Mus musculus olfactory receptor 17 (Olfr17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	P2; MOR263-5	P2; MOR263-5
Mus musculus	MEEBO	ILMN_221572	ILMN_221572	FV4	scl0014352.1_82	NM_010245.1			6857788	NM_010245.1	Fv4		ILMN_2737354	002940148	S	1724	CGACCATACAGGATTAGTTAGAGACAGCATGGCTAAACTGAGAGAAAGGC						The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]	A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome [goid 19058] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212711	ILMN_212711	PRPSAP2	NM_144806.1	NM_144806.1		212627	21450168	NM_144806.1	Prpsap2	NP_659055.1	ILMN_2733796	004590605	S	162	ATTGACTTTAAGCAGCAAACAGTAAAACACTGAGCTCTTCAGCTCCGCCT	11	-	61569841-61569847:61570084-61570126	11qB2	Mus musculus phosphoribosyl pyrophosphate synthetase-associated protein 2 (Prpsap2), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]	MGC118451; A230054F23Rik; MGC36957	MGC118451; A230054F23Rik; MGC36957
Mus musculus	RefSeq	ILMN_212711	ILMN_212711	PRPSAP2	NM_144806.1	NM_144806.1		212627	21450168	NM_144806.1	Prpsap2	NP_659055.1	ILMN_2629446	006770386	S	1700	GCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGAC	11	-	61543243-61543292	11qB2	Mus musculus phosphoribosyl pyrophosphate synthetase-associated protein 2 (Prpsap2), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]	MGC118451; A230054F23Rik; MGC36957	MGC118451; A230054F23Rik; MGC36957
Mus musculus	Riken	ILMN_204125	ILMN_204125	FNBP3	ri|B130047E07|PX00158J15|AK045207|3066					AK045207	Fnbp3		ILMN_1236511	004280309	S	2955	TGTGGGGGCCAAGGCATGCACATCTCTCTGGTGGAGGCCAGCATAGTATA										
Mus musculus	RefSeq	ILMN_198815	ILMN_198815	LOC244000	XM_145622.3	XM_145622.3			38087984	XM_145622.3	LOC244000		ILMN_2533023	002070491	S	3106	CTACCATATATACCTAACCCGCCAGACCCTCCCATTGAAAAACAGCTGGG										
Mus musculus	RefSeq	ILMN_188361	ILMN_236338	LEF1	NM_010703.3	NM_010703.3		16842	118130133	NM_010703.3	Lef1	NP_034833.2	ILMN_2648475	002710286	S	1936	GAGCGAATGTCGTAGCTGAGTGCACGCTAAAGGAGAGTGCAGCTATCAAC	3	+	130897638-130897687	3qG3	Mus musculus lymphoid enhancer binding factor 1 (Lef1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]	The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 48341] [evidence IGI]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IGI]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IGI]; The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus [goid 21542] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]	The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IGI]	3000002B05; Lef-1; AI451430	3000002B05; Lef-1; AI451430
Mus musculus	RefSeq	ILMN_188361	ILMN_236338	LEF1	NM_010703.3	NM_010703.3		16842	118130133	NM_010703.3	Lef1	NP_034833.2	ILMN_1239469	002070291	S	1643	GCCTGTTTATCCCATCACGGGTGGATTCAGGCAACCCTACCCATCCTCAC	3	+	130893950-130893999	3qG3	Mus musculus lymphoid enhancer binding factor 1 (Lef1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]	The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 48341] [evidence IGI]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IGI]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IGI]; The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus [goid 21542] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]	The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IGI]	3000002B05; Lef-1; AI451430	3000002B05; Lef-1; AI451430
Mus musculus	RefSeq	ILMN_244938	ILMN_244938	H2-DMB2	NM_010388.2	NM_010388.2		15000	110626089	NM_010388.2	H2-DMb2	NP_034518.1	ILMN_2979639	003450482	S	351	CAGGAGAGCCTTATTCATCGCTTGCAAAACGGGCTTCAGGACTGTGCCAC	17	+	34284630-34284679	17qB1	Mus musculus histocompatibility 2, class II, locus Mb2 (H2-DMb2), mRNA.	A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IDA]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence ISA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	H2-Mb2; H-2Mb2	H2-Mb2; H-2Mb2
Mus musculus	RefSeq	ILMN_221990	ILMN_221990	DEFB34	NM_183035.1	NM_183035.1		360211	33942123	NM_183035.1	Defb34	NP_898856.1	ILMN_1232368	001030376	S	126	CGAAGAACTTGTTGCTCTCTGCTGGAAGAATCTAAAGTGCTGTGTGACAG	8	+	19126420-19126469	8qA1.3	Mus musculus defensin beta 34 (Defb34), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	RefSeq	ILMN_196142	ILMN_224538	CDC42EP3	NM_026514.2	NM_026514.2		260409	142367815	NM_026514.2	Cdc42ep3	NP_080790.1	ILMN_2733185	004150739	S	1772	CAGCGAAGTCTCCAGCGTTATGATTTTACTCTTTGCATATTCGAGCAACC	17	-	79733510-79733559	17qE3	Mus musculus CDC42 effector protein (Rho GTPase binding) 3 (Cdc42ep3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	UB1; Borg2; AA986861; 3200001F04Rik; Cep3	UB1; Borg2; AA986861; 3200001F04Rik; Cep3
Mus musculus	Riken	ILMN_206847	ILMN_206847	D430006M22RIK	ri|D430006M22|PX00193O17|AK084896|1561					AK084896	D430006M22Rik		ILMN_1214193	006580088	S	1283	GGCCAGACACCTTTAAGCAGAGAGGGGAACACCTGGGGACTCCAACCTAA										
Mus musculus	RefSeq	ILMN_211236	ILMN_211236	ATP8B3	NM_026094.3	NM_026094.3		67331	46391100	NM_026094.3	Atp8b3	NP_080370.2	ILMN_2613887	000130020	S	4131	GAGGCCCATCGCTGGGAGATTCCCAGTCATCCAGGACAATGCAACAGTCA	10	-	79982560-79982609	10qC1	Mus musculus ATPase, class I, type 8B, member 3 (Atp8b3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IMP]	ATPIK; 1700042F02Rik; SAPLT; 1700056N23Rik	ATPIK; 1700042F02Rik; SAPLT; 1700056N23Rik
Mus musculus	RefSeq	ILMN_211236	ILMN_211236	ATP8B3	NM_026094.3	NM_026094.3		67331	46391100	NM_026094.3	Atp8b3	NP_080370.2	ILMN_1242552	006380445	S	35	ACAACATCGGCGGCCCTGGACGCCGCTGGCGGCCCGCCCTAGGCAGCCAG	10	-	80001785-80001834	10qC1	Mus musculus ATPase, class I, type 8B, member 3 (Atp8b3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IMP]	ATPIK; 1700042F02Rik; SAPLT; 1700056N23Rik	ATPIK; 1700042F02Rik; SAPLT; 1700056N23Rik
Mus musculus	RefSeq	ILMN_211236	ILMN_211236	ATP8B3	NM_026094.3	NM_026094.3		67331	46391100	NM_026094.3	Atp8b3	NP_080370.2	ILMN_2968170	006980291	S	3960	CCGTCCGCATCCGAGGATGAGGCTTTCTACAGTGTGGCTTCACAGTACAC	10	-	79982731-79982780	10qC1	Mus musculus ATPase, class I, type 8B, member 3 (Atp8b3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IMP]	ATPIK; 1700042F02Rik; SAPLT; 1700056N23Rik	ATPIK; 1700042F02Rik; SAPLT; 1700056N23Rik
Mus musculus	RefSeq	ILMN_211236	ILMN_211236	ATP8B3	NM_026094.3	NM_026094.3		67331	46391100	NM_026094.3	Atp8b3	NP_080370.2	ILMN_1228150	003610195	S	274	CTGCCAAATACAACATCTTCTCCTTCCTGCCTCTGAACCTGTACGAGCAG	10	-	79998079-79998128	10qC1	Mus musculus ATPase, class I, type 8B, member 3 (Atp8b3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IMP]	ATPIK; 1700042F02Rik; SAPLT; 1700056N23Rik	ATPIK; 1700042F02Rik; SAPLT; 1700056N23Rik
Mus musculus	MEEBO	ILMN_189249	ILMN_189249	1700095D23RIK	scl49204.2.1_49						1700095D23Rik		ILMN_2459612	006040092	S	2	ACCTCCATTCTCGCGCGCTCAGTTCGCTCTGGAAGCCGAGGGGCTTGGGG										
Mus musculus	RefSeq	ILMN_200971	ILMN_200971	LOC384675	XM_357784.1	XM_357784.1			38087505	XM_357784.1	LOC384675		ILMN_2540655	004900059	S	18	GAACTTTCAGCATCTCGGGGCACAGGATGGCCAGTCAGCTAAGCATGGGA										
Mus musculus	MEEBO	ILMN_222380	ILMN_222380	1700022I11RIK	scl25524.2.1_104	XM_355479.1			38078274	XM_355479.1	1700022I11Rik		ILMN_2748775	000430246	S	431	CCCATCCTGTAGATCTGAGGGCCGCCCCAGGGCCACAGAGACACAAGAAC										
Mus musculus	RefSeq	ILMN_201316	ILMN_201316	LOC382422	XM_358727.1	XM_358727.1			38090764	XM_358727.1	LOC382422		ILMN_1248134	001470577	S	1201	GCGGCTGCACGAGAAAGGGAACAAGGAGACTGGTGGCCTAAATCCAAGCG										
Mus musculus	RefSeq	ILMN_213082	ILMN_213082	2310004I24RIK	NM_025510.2	NM_025510.2		66358	142351814	NM_025510.2	2310004I24Rik	NP_079786.1	ILMN_1226476	004220592	S	1034	GGCTTGGAACTACGTGGATGCTCTGTCAATCATATGGTCTCACAAGTGTG	11	-	66851854-66851903	11qB3	Mus musculus RIKEN cDNA 2310004I24 gene (2310004I24Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RP23-67J22.7; MDS006	RP23-67J22.7; MDS006
Mus musculus	RefSeq	ILMN_196007	ILMN_196007	USP26	NM_031388.1	NM_031388.1		83563	13878220	NM_031388.1	Usp26	NP_113565.1	ILMN_2960235	006180537	S	3398	GGCTGCACATGTTGGAAAAAATACAAAAATGGGGAGAGGGCTGCATTTAG	X	-	49107417-49107466	XqA5	Mus musculus ubiquitin specific peptidase 26 (Usp26), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC159157	MGC159157
Mus musculus	RefSeq	ILMN_196007	ILMN_196007	USP26	NM_031388.1	NM_031388.1		83563	13878220	NM_031388.1	Usp26	NP_113565.1	ILMN_2960233	006180242	S	3654	AGGAGCTCTGCATGTGCTCGGGACCTACTGTGTGCTCCTTTCTCCAGAAT	X	-	49107161-49107210	XqA5	Mus musculus ubiquitin specific peptidase 26 (Usp26), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC159157	MGC159157
Mus musculus	RefSeq	ILMN_218032	ILMN_218032	EIF3A	NM_010123.3	NM_010123.3		13669	146219836	NM_010123.3	Eif3a	NP_034253.3	ILMN_2690686	007320110	S	2384	GCAGCTAGAACGAGAAAAAGCTCTGGAGCATAAGAATAGGATGTCACGAA				19qD3	Mus musculus eukaryotic translation initiation factor 3, subunit A (Eif3a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	A830012B05Rik; Eif3; mKIAA0139; Csma	A830012B05Rik; Eif3; mKIAA0139; Csma
Mus musculus	RefSeq	ILMN_218032	ILMN_218032	EIF3A	NM_010123.3	NM_010123.3		13669	146219836	NM_010123.3	Eif3a	NP_034253.3	ILMN_2735157	001300491	S	4594	AAAACCCTTTAAGCCAACTGATCTGACAGCTTTCCCATCAGTAGAAGTGG				19qD3	Mus musculus eukaryotic translation initiation factor 3, subunit A (Eif3a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	A830012B05Rik; Eif3; mKIAA0139; Csma	A830012B05Rik; Eif3; mKIAA0139; Csma
Mus musculus	RefSeq	ILMN_186474	ILMN_256898	EVPL	NM_025276.3	NM_025276.3		14027	111185906	NM_025276.3	Evpl	NP_079552.3	ILMN_2435835	006580402	S	6304	GCGCAATCGTTTGTGGTGTTGGGCTCTGTCCCCAAATATGGGAAGTTCCG	11	-	116081917-116081966	11qE2	Mus musculus envoplakin (Evpl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217619	ILMN_217619	4930529M09RIK	scl40586.13.1_225	XM_126016.2			38091286	XM_126016.2	4930529M09Rik		ILMN_2685525	005340634	S	1625	CAGTTCAGGAGCCTGGTTCCCCTGTAAGACCTATGTTGTGTATTTTCTCC										
Mus musculus	RefSeq	ILMN_216438	ILMN_216438	APRIN	NM_175310.5	NM_175310.5		100710	118129869	NM_175310.5	Aprin	NP_780519.3	ILMN_1259798	001090669	S	4992	CTTCACACCTCAGTATTGGTCCCAGAATTCTCTGGCCTTTCATGGCAACG	5	+	151603179-151603228	5qG3	Mus musculus androgen-induced proliferation inhibitor (Aprin), mRNA.				AW212954; AS3; mKIAA0979; AI646570	AW212954; AS3; mKIAA0979; AI646570
Mus musculus	RefSeq	ILMN_212806	ILMN_212806	HIST1H1A	NM_030609.1	NM_030609.1		80838	21426822	NM_030609.1	Hist1h1a	NP_085112.1	ILMN_2630521	003800768	S	390	AGTCCAAGGCCATCACCACCAAGGTGTCAGTGAAGGCGAAAGCATCCGGG	13	+	23855926-23855975	13qA3.1	Mus musculus histone cluster 1, H1a (Hist1h1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	H1f1; H1.1; H1a; H1var3	H1f1; H1.1; H1a; H1var3
Mus musculus	RefSeq	ILMN_210523	ILMN_210523	RNF19A	NM_013923.2	NM_013923.2		30945	134053884	NM_013923.2	Rnf19a	NP_038951.1	ILMN_1218413	001440739	S	4095	CTGCAGCCGTGTGCCGTCCGTCGTTTTCCTCGCTGCATCCATTAATCTGC	15	-	36169820-36169869	15qB3.1	Mus musculus ring finger protein 19A (Rnf19a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	UIP117; AA032313; Ubce7ip2; XYbp	UIP117; AA032313; Ubce7ip2; XYbp
Mus musculus	RefSeq	ILMN_185098	ILMN_210523	RNF19A	NM_013923.2	NM_013923.2		30945	134053884	NM_013923.2	Rnf19a	NP_038951.1	ILMN_2424138	000460289	S	141	TGAAAAGTCGTCCTCCGTTCTGCCTCCGCTTTCTGCCTCCGCGGGATGGG	15	-	36212712-36212761	15qB3.1	Mus musculus ring finger protein 19A (Rnf19a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	UIP117; AA032313; Ubce7ip2; XYbp	UIP117; AA032313; Ubce7ip2; XYbp
Mus musculus	Riken	ILMN_202784	ILMN_202784	4931415C11RIK	ri|4931415C11|PX00016H01|AK029860|3877					AK029860	4931415C11Rik		ILMN_1254904	007000296	S	3518	TAAGGGCCACTGACCTTTGCCCAGGAATGCCCTGAGATCCTAGTGGCCTG										
Mus musculus	RefSeq	ILMN_215350	ILMN_215350	MUSTN1	NM_181390.1	NM_181390.1		66175	31088921	NM_181390.1	Mustn1	NP_852055.1	ILMN_2797928	002680646	S	617	AGGCAGAGCCTTAGCCGTGGAGTCCTGGTGCGGACTTTCTGATGCGTGTA	14	+	29710340-29710389	14qB	Mus musculus musculoskeletal, embryonic nuclear protein 1 (Mustn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]			Mustang; 1110028G01Rik; MGC151316; MGC151318	Mustang; 1110028G01Rik; MGC151316; MGC151318
Mus musculus	MEEBO	ILMN_193710	ILMN_193710	SUMO1	scl16716.7.1_64				6678488	NM_009460	Sumo1		ILMN_2632940	003370661	S	1	TCCCTGCAGCCGCGGTGTTGTGCTGTAGAGAAGGGACGGATTTGTAAACC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]		
Mus musculus	MEEBO	ILMN_193710	ILMN_193710	SUMO1	scl16716.7.1_64				6678488	NM_009460	Sumo1		ILMN_1243356	005310735	S	1	CCCAGAGCACCCTAATTTTGTGCTCCCTAACAGATGCTTGAGAACAAAAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]		
Mus musculus	Riken	ILMN_201996	ILMN_201996	2400007A17RIK	ri|2400007A17|ZX00041I15|AK010293|1317					AK010293	2400007A17Rik		ILMN_1237173	006940273	S	759	TGCCTCTTTACTCAGAAGATCGCCTTGAGGTGGCGAGGATGCAGGGGCTC										
Mus musculus	RefSeq	ILMN_200351	ILMN_200351	LOC386279	XM_359155.1	XM_359155.1			38081396	XM_359155.1	LOC386279		ILMN_1246448	006250348	S	396	ATCATTGCCTAACAGAGGGGAAGACCAGACGGAACCTCTGTGGGTGCCGG										
Mus musculus	RefSeq	ILMN_216752	ILMN_216752	CAPZA2	NM_007604.2	NM_007604.2		12343	52345406	NM_007604.2	Capza2	NP_031630.1	ILMN_2698330	003310279	S	1532	GATTCTGAAATTAAATGAGAATACTTATTTCAGAAATGCATTTAATGCTT	6	+	17616082-17616131	6qA2	Mus musculus capping protein (actin filament) muscle Z-line, alpha 2 (Capza2), mRNA.	A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	1110053K06Rik; AW208808; Cappa2	1110053K06Rik; AW208808; Cappa2
Mus musculus	RefSeq	ILMN_216752	ILMN_216752	CAPZA2	NM_007604.2	NM_007604.2		12343	52345406	NM_007604.2	Capza2	NP_031630.1	ILMN_2674866	003460348	S	627	TGGTAATGTTCAGCTAGTGAGTCATAAAGATATACAAGATTCCCTCACAG	6	+	17612115-17612164	6qA2	Mus musculus capping protein (actin filament) muscle Z-line, alpha 2 (Capza2), mRNA.	A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	1110053K06Rik; AW208808; Cappa2	1110053K06Rik; AW208808; Cappa2
Mus musculus	RefSeq	ILMN_199577	ILMN_246817	EG621976	XM_886379.2	XM_886379.2		621976	94395052	XM_886379.2	EG621976	XP_891472.2	ILMN_2535722	001070411	S	241	CTGGTGTGGGGCGTGGGGCAGACTGTGCTGACACTCATCATCTCCTTTTC	13	+	41729884-41729933	13qA4	PREDICTED: Mus musculus predicted gene, EG621976 (EG621976), mRNA.					
Mus musculus	Riken	ILMN_202578	ILMN_202578	ELK3	ri|E430004K16|PX00097O19|AK088129|1332					AK088129	Elk3		ILMN_1236571	006900240	S	407	GAGCGCTGAGATACTATTAAGACAAGACACCAAGTGGACTGTTTCTGGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198259	ILMN_198259	LOC381130	XM_358511.1	XM_358511.1			38083398	XM_358511.1	LOC381130		ILMN_1232279	003400195	S	131	CATTGGGAACGGCGGGAAACCACTGAGGGAATTGCTGTCTTGCATGGAGC										
Mus musculus	RefSeq	ILMN_197193	ILMN_197193	LOC238598	XM_138595.2	XM_138595.2			38074524	XM_138595.2	LOC238598		ILMN_1260059	003610725	S	668	GGGGCCATGCTGCTGTTTGTGCAGGCTTTGTAGTCAAGCAAGGAGACCCG										
Mus musculus	RefSeq	ILMN_184872	ILMN_229264	STAU2	NM_025303.2	NM_025303.2		29819	142379809	NM_025303.2	Stau2	NP_079579.1	ILMN_1217723	004570670	S	1900	CACAGATCCCTTCTGATTCTTTCAATTCTATTGCCAGGTAGTCGCTAGTG	1	-	16334527-16334576	1qA3	Mus musculus staufen (RNA binding protein) homolog 2 (Drosophila) (Stau2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]		
Mus musculus	RefSeq	ILMN_240579	ILMN_240579	XKR7	NM_001011732.1	NM_001011732.1		228787	59858536	NM_001011732.1	Xkr7	NP_001011732.1	ILMN_3129924	007320670	A	2415	CCTGTAGGAAGGGAAACTGGACGGGAGGAGGATTAGAGCAGAGAGTGGGG	2	+	152881215-152881264	2qH1	Mus musculus X Kell blood group precursor related family member 7 homolog (Xkr7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AY534253	AY534253
Mus musculus	RefSeq	ILMN_240579	ILMN_240579	XKR7	NM_001011732.1	NM_001011732.1		228787	59858536	NM_001011732.1	Xkr7	NP_001011732.1	ILMN_3053291	000020192	I	1967	GTCTGGTTTTTCAGGGCCACCAGGCTAAGTGGGAATAGATCTTTGGATCC	2	+	152880767-152880816	2qH1	Mus musculus X Kell blood group precursor related family member 7 homolog (Xkr7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AY534253	AY534253
Mus musculus	RefSeq	ILMN_197357	ILMN_240579	XKR7	NM_001011732.1	NM_001011732.1		228787	59858536	NM_001011732.1	Xkr7	NP_001011732.1	ILMN_2527854	007000706	S	1844	CGGTTGCAGTACAGGAGCATGGGCACCTCCCAAGAGCTGCTGGAGTATGA	2	+	152880644-152880693	2qH1	Mus musculus X Kell blood group precursor related family member 7 homolog (Xkr7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AY534253	AY534253
Mus musculus	MEEBO	ILMN_191974	ILMN_191974	4921506J03RIK	scl00382423.1_194				51765855	XM_356498	4921506J03Rik		ILMN_2483865	000360328	S	5	CAGCTGACTCTGTCCCTCGGTAGTTTCACTAAACAAGAACTCATAACAGA										
Mus musculus	MEEBO	ILMN_191974	ILMN_191974	4921506J03RIK	scl00382423.1_194				51765855	XM_356498	4921506J03Rik		ILMN_2541863	001980487	S	334	ACTGGGAGCGTGAAGGATTTCGGCATCCAGCCAGTGGAGGACAAAGGCGC										
Mus musculus	RefSeq	ILMN_231164	ILMN_231164	TDPOZ3	NM_207271.1	NM_207271.1		399674	46402298	NM_207271.1	Tdpoz3	NP_997154.1	ILMN_3037822	005490544	I	900	ACTAAATAGCACAGAGAAGCTGAAGAGTCAGGCCCTGGATTTCATTGCCA	3	+	93630841-93630890	3qF2.1	Mus musculus TD and POZ domain containing 3 (Tdpoz3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_231164	ILMN_231164	TDPOZ3	NM_207271.1	NM_207271.1		399674	46402298	NM_207271.1	Tdpoz3	NP_997154.1	ILMN_3112023	003290538	A	414	CCCTGAAGACCAGTTCACCATATGCTGCAAGGTGAGCATAGTTGGAACCG	3	+	93630355-93630404	3qF2.1	Mus musculus TD and POZ domain containing 3 (Tdpoz3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_220165	ILMN_220165	EIF3K	NM_028659.2	NM_028659.2		73830	142359029	NM_028659.2	Eif3k	NP_082935.1	ILMN_2718416	007050162	S	649	CTGCAGCCAGGAAGAGAGCATTAAGCCCAAGAACATCGTGGAGAAGATTG	7	-	29757559-29757608	7qA3-qB1	Mus musculus eukaryotic translation initiation factor 3, subunit K (Eif3k), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex [goid 5852] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence RCA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence RCA]; Interacting selectively with any part of a ribosome [goid 43022] [evidence IEA]	1200009C21Rik; Eif3s12	1200009C21Rik; Eif3s12
Mus musculus	RefSeq	ILMN_199099	ILMN_199099	LOC234374	XM_134242.3	XM_134242.3			38090903	XM_134242.3	LOC234374		ILMN_2534045	001230259	S	1253	GAAACAGATGATCCTGGAGGGGAAGGACCCAGACCTGGAGGCCAAACGCA										
Mus musculus	RefSeq	ILMN_198714	ILMN_198714	LOC237195	XM_136144.3	XM_136144.3			38086992	XM_136144.3	LOC237195		ILMN_1260258	000610382	S	1	ATGGAATTCTTGACAGGTCGACTCCGCATGGGGTCAGGGTCAGTGCAGAA										
Mus musculus	RefSeq	ILMN_224067	ILMN_251626	EIF3D	NM_018749.2	NM_018749.2		55944	125628628	NM_018749.2	Eif3d	NP_061219.2	ILMN_2774163	006960059	S	1796	TTAAATGAGTTGGCCTGGCGCCTGCGTGTGTTGCACCCAGCTGTGCTTGG	15	-	77789492-77789538:77789539-77789541	15qE1	Mus musculus eukaryotic translation initiation factor 3, subunit D (Eif3d), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	eIF3p66; 66/67kDa; Eif3s7; AA407891; MGC115774	eIF3p66; 66/67kDa; Eif3s7; AA407891; MGC115774
Mus musculus	RefSeq	ILMN_216495	ILMN_216495	GPR77	NM_176912.3	NM_176912.3		319430	141802432	NM_176912.3	Gpr77	NP_795886.1	ILMN_2671707	000050088	S	2597	TTTAACGCCTATGGCATACTGTGTCCAGCCAACTCTCCCCCACAGATCCC	7	-	16820809-16820858	7qA2	Mus musculus G protein-coupled receptor 77 (Gpr77), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with anaphylatoxin C5a to initiate a change in cell activity [goid 4944] [evidence IEA]	C5L2; E030029A11Rik	C5L2; E030029A11Rik
Mus musculus	RefSeq	ILMN_200909	ILMN_200909	LOC384649	XM_357765.1	XM_357765.1			38086961	XM_357765.1	LOC384649		ILMN_1222020	005720402	S	1690	AGCCGACTTTGCTGCCAGTTGGTGACGGCTTCAGGGAGGCGGATCTGTGT										
Mus musculus	RefSeq	ILMN_214916	ILMN_257950	CYP20A1	NM_030013.2	NM_030013.2		77951	142367182	NM_030013.2	Cyp20a1	NP_084289.1	ILMN_2715585	006560136	S	1352	GGTCACATCAGCAAGGGAAGAAGCTTGGATCACTGTCTCCAAAAGACACT	1	+	60444082-60444131	1qC2	Mus musculus cytochrome P450, family 20, subfamily A, polypeptide 1 (Cyp20a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	Cypm; A930011N14Rik	Cypm; A930011N14Rik
Mus musculus	RefSeq	ILMN_214916	ILMN_257950	CYP20A1	NM_030013.2	NM_030013.2		77951	142367182	NM_030013.2	Cyp20a1	NP_084289.1	ILMN_2757625	005220075	S	626	GATTGGAAAAGGCTTTCTAGATGGGTCACTCGATAAAAACACCACTCGGA	1	+	60423504-60423553	1qC2	Mus musculus cytochrome P450, family 20, subfamily A, polypeptide 1 (Cyp20a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	Cypm; A930011N14Rik	Cypm; A930011N14Rik
Mus musculus	RefSeq	ILMN_230389	ILMN_230389	XLR4A	NM_001081642.1	NM_001081642.1		434794	126032322	NM_001081642.1	Xlr4a	NP_001075111.1	ILMN_2965669	005870021	S	1093	CGTGTACAGTTAAAGCTCGCGTCCTGTGATTTCCTGTATGGATACCCTGG	X	-	70324318-70324367	XqA7.3	Mus musculus X-linked lymphocyte-regulated 4A (Xlr4a), mRNA. XM_985903 XM_985942 XM_985977 XM_988796 XM_988827 XM_988867 XM_988909 XM_988942 XM_988983				MGC106987	MGC106987
Mus musculus	RefSeq	ILMN_220800	ILMN_220800	NAT10	NM_153126.2	NM_153126.2		98956	118130147	NM_153126.2	Nat10	NP_694766.1	ILMN_1233363	002120132	S	3388	GCAAAGGCAGGCACCATCGTTCCATCTGTATGCCCGCCGTGACTGAAGAC	2	-	103561834-103561883	2qE2	Mus musculus N-acetyltransferase 10 (Nat10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	AI429152; RP23-266F3.3; MGC25461	AI429152; RP23-266F3.3; MGC25461
Mus musculus	RefSeq	ILMN_218708	ILMN_233363	LOC669053	XM_972773.1	XM_972773.1		669053	94378767	XM_972773.1	LOC669053	XP_977867.1	ILMN_2699222	005690300	S	82	GTGTTGCTCTGGTTGTCTGGTGTTGATGGAGACATTGTGATGACCCAGTC					PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC669053), mRNA.					
Mus musculus	RefSeq	ILMN_198018	ILMN_252149	TMEM211	NM_001033428.2	NM_001033428.2		333048	141803583	NM_001033428.2	Tmem211	NP_001028600.1	ILMN_2530189	007650403	S	693	ATGCCGGCTGAGCTGGGGCTATGCCACTGCTATCCTCAACATGGTCCTGA	5	+	113667149-113667198	5qF	Mus musculus transmembrane protein 211 (Tmem211), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222767	ILMN_222767	CTNNA3	NM_177612.1	NM_177612.1		216033	29243985	NM_177612.1	Ctnna3	NP_808280.1	ILMN_2834525	000990291	S	2612	CGGCACCCAGTAGTCATGTGGAGGATGAAGGCTCCGGCTAAGAAGCCCTT	10	+	64398027-64398076	10qB4-qB5.1	Mus musculus catenin (cadherin associated protein), alpha 3 (Ctnna3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IPI]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence TAS]	4930429L08Rik; Catna3; Vr22; 4933408A16	4930429L08Rik; Catna3; Vr22; 4933408A16
Mus musculus	RefSeq	ILMN_199381	ILMN_199381	CTAGE5	NM_146034.2	NM_146034.2		217615	119372289	NM_146034.2	Ctage5	NP_666146.2	ILMN_2653619	002100537	S	2448	CACAGGAGGCCTGACAGCGTTACGTCTTACCGGCAGTCATTTCCGTCTCA	12	+	60290773-60290786:60290787-60290822	12qC1	Mus musculus CTAGE family, member 5 (Ctage5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MEA6; D12Bwg0579e; Mgea6; Mgea; MGC30562	MEA6; D12Bwg0579e; Mgea6; Mgea; MGC30562
Mus musculus	RefSeq	ILMN_199381	ILMN_199381	CTAGE5	NM_146034.2	NM_146034.2		217615	119372289	NM_146034.2	Ctage5	NP_666146.2	ILMN_2645138	006380040	S	359	GAGTCATCTTTAAAGGAGGCCAGCTTTGAGAAGGAGTCAACAGAAGCACA	12	+	60245698-60245747	12qC1	Mus musculus CTAGE family, member 5 (Ctage5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MEA6; D12Bwg0579e; Mgea6; Mgea; MGC30562	MEA6; D12Bwg0579e; Mgea6; Mgea; MGC30562
Mus musculus	MEEBO	ILMN_213793	ILMN_213793	CCL21C	scl0065956.1_31				14547894	NM_023052	Ccl21c		ILMN_2640848	006370475	S	480	CAAGCTGGGTGGTTCACGGTCCAACTCACAGGCAAAGAGGGAGCTAGAAA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_209408	ILMN_209408	LIG1	NM_010715.2	NM_010715.2		16881	133892265	NM_010715.2	Lig1	NP_034845.2	ILMN_2627660	004050711	S	235	GTAAAGCGAAGAAGCCAGAGAAGGAGACACCCAGCAGCATCAGAGAGAAG	7	+	13867828-13867877	7qA1	Mus musculus ligase I, DNA, ATP-dependent (Lig1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m) [goid 3910] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	LigI; AL033288	LigI; AL033288
Mus musculus	RefSeq	ILMN_209408	ILMN_209408	LIG1	NM_010715.2	NM_010715.2		16881	133892265	NM_010715.2	Lig1	NP_034845.2	ILMN_2657356	004760202	S	1720	ACCTGGATCGAATCATCCCTGTGCTGCTGGAACATGGCCTGGAACGTCTC	7	+	13885622-13885671	7qA1	Mus musculus ligase I, DNA, ATP-dependent (Lig1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m) [goid 3910] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	LigI; AL033288	LigI; AL033288
Mus musculus	RefSeq	ILMN_209408	ILMN_209408	LIG1	NM_010715.2	NM_010715.2		16881	133892265	NM_010715.2	Lig1	NP_034845.2	ILMN_2595519	003060767	S	2901	CAACAAAGCTCAGACTTGGACTCCGACGTTGAAGACTATTAACCTCCTGC	7	+	13896583-13896625:13896626-13896632	7qA1	Mus musculus ligase I, DNA, ATP-dependent (Lig1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m) [goid 3910] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	LigI; AL033288	LigI; AL033288
Mus musculus	RefSeq	ILMN_191214	ILMN_314718	A930003A15RIK	XR_035452.1	XR_035452.1		68162	149267459	XR_035452.1	A930003A15Rik		ILMN_2477155	002760379	S	472	CCCAGACCCCAGATACTCACCATACATGGTGGTGCGGATAGCAGAGGCAG	16	-	19883848-19883897	16qA3	PREDICTED: Mus musculus RIKEN cDNA A930003A15 gene (A930003A15Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_210590	ILMN_210590	MED10	NM_138596.1	NM_138596.1		28077	20070409	NM_138596.1	Med10	NP_613062.1	ILMN_2879382	004010088	S	48	CCGGCGATGGCGGAGAAGTTTGACCATCTGGAGGAGCACCTGGAGAAGTT	13	+	70277301-70277302:70277303-70277350	13qC1	Mus musculus mediator of RNA polymerase II transcription, subunit 10 homolog (NUT2, S. cerevisiae) (Med10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		D13Wsu50e; C78613; AA959813; AI385605	D13Wsu50e; C78613; AA959813; AI385605
Mus musculus	MEEBO	ILMN_222207	ILMN_222207	BC030417	scl00263406.1_117	NM_153804.2			31982014	NM_153804.2	BC030417		ILMN_2746274	005340711	S	3171	TCACGACATCAACATCAGAACTTTCGCTCTAAGAGGTAGGGGTAAGAGCT										
Mus musculus	RefSeq	ILMN_212515	ILMN_212515	4921505C17RIK	NM_030168.2	NM_030168.2		78757	46048255	NM_030168.2	4921505C17Rik	NP_084444.2	ILMN_1236613	003400324	S	2636	GCGACCTCATGTCTACCTGCCCGTACACCTTTATGGACAACTGGTACACC	15	+	6732170-6732219	15qA1	Mus musculus RIKEN cDNA 4921505C17 gene (4921505C17Rik), mRNA.	A protein complex that contains the TOR (target of rapamycin) serine/threonine kinase and mediates spatial control of cell growth via regulation of actin cytoskeleton polarization [goid 31932] [evidence IPI]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51896] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]		AW492497; AVO3; RICTOR; D530039E11Rik; 6030405M08Rik	AW492497; AVO3; RICTOR; D530039E11Rik; 6030405M08Rik
Mus musculus	RefSeq	ILMN_212515	ILMN_212515	4921505C17RIK	NM_030168.2	NM_030168.2		78757	46048255	NM_030168.2	4921505C17Rik	NP_084444.2	ILMN_1241522	002450717	S	8994	CGCTGCTACATTTTTGGAGGTTCTGGTGTTTGTAGGTCACTGAACAGACA	15	+	6750083-6750132	15qA1	Mus musculus RIKEN cDNA 4921505C17 gene (4921505C17Rik), mRNA.	A protein complex that contains the TOR (target of rapamycin) serine/threonine kinase and mediates spatial control of cell growth via regulation of actin cytoskeleton polarization [goid 31932] [evidence IPI]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51896] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]		AW492497; AVO3; RICTOR; D530039E11Rik; 6030405M08Rik	AW492497; AVO3; RICTOR; D530039E11Rik; 6030405M08Rik
Mus musculus	RefSeq	ILMN_212515	ILMN_212515	4921505C17RIK	NM_030168.2	NM_030168.2		78757	46048255	NM_030168.2	4921505C17Rik	NP_084444.2	ILMN_2694387	002030746	S	4997	GTTGTCACACTGCACATTTAGACTTCAGTGTCGGCGGTTCATACAAGAGT	15	+	6745959-6746008	15qA1	Mus musculus RIKEN cDNA 4921505C17 gene (4921505C17Rik), mRNA.	A protein complex that contains the TOR (target of rapamycin) serine/threonine kinase and mediates spatial control of cell growth via regulation of actin cytoskeleton polarization [goid 31932] [evidence IPI]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51896] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]		AW492497; AVO3; RICTOR; D530039E11Rik; 6030405M08Rik	AW492497; AVO3; RICTOR; D530039E11Rik; 6030405M08Rik
Mus musculus	RefSeq	ILMN_191244	ILMN_226236	ITSN1	NM_010587.2	NM_010587.2		16443	134288903	NM_010587.2	Itsn1	NP_034717.2	ILMN_2627268	003870497	S	5114	TGGGCTCTCAGTGCCACATCACCAAGACAATCCAGGACACGCTAAACCCC	16	+	91909480-91909529	16qC3.3-qC4	Mus musculus intersectin 1 (SH3 domain protein 1A) (Itsn1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI316805; AA545208; Sh3p17; AI848451; EHSH1; AA517634; Itsn; Ese1	AI316805; AA545208; Sh3p17; AI848451; EHSH1; AA517634; Itsn; Ese1
Mus musculus	RefSeq	ILMN_217707	ILMN_217707	ALX1	NM_172553.3	NM_172553.3		216285	146149128	NM_172553.3	Alx1	NP_766141.1	ILMN_2686652	004250753	S	2405	CCGGTGAACGTTAGCAATCGCCCAAGAAGCCCTAATGGGTAAAGAACAGG				10qD1	Mus musculus ALX homeobox 1 (Alx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The process aimed at the progression of a mesenchymal cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14031] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	C130005I02; AI314867; Cart1	C130005I02; AI314867; Cart1
Mus musculus	MEEBO	ILMN_212052	ILMN_212052	2610207P08RIK	scl067153.8_8	XM_127746.2			28479608	XM_127746.2	2610207P08Rik		ILMN_2622208	002000541	S	665	TCGCTATGCCCATGGTCTGATCTCTGATTACATCCCTAAAGAACTGAGTG										
Mus musculus	RefSeq	ILMN_187769	ILMN_187769	VAV1	NM_011691.3	NM_011691.3		22324	141802217	NM_011691.3	Vav1	NP_035821.2	ILMN_1224077	005270608	S	2800	CTGATTTTCTCCAGTCCTCCACGAAAGGTGGGGCTTGAGGCAACTGATTC	17	+	57467306-57467355	17qD	Mus musculus vav 1 oncogene (Vav1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IGI]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IGI]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IGI]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IGI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rac family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 30676] [evidence IGI]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IGI]	Vav; vav-T	Vav; vav-T
Mus musculus	RefSeq	ILMN_217264	ILMN_217264	ANKRD33	NM_144790.1	NM_144790.1		208258	21450138	NM_144790.1	Ankrd33	NP_659039.1	ILMN_2938258	005360681	S	1287	GGCTACAGTGGTTATGGTAGTGATACCCACGCTGTATTCTGTGTAGGTCG	15	+	100950298-100950347	15qF2	Mus musculus ankyrin repeat domain 33 (Ankrd33), mRNA.				MGC31569; A930021G21Rik	MGC31569; A930021G21Rik
Mus musculus	RefSeq	ILMN_217264	ILMN_217264	ANKRD33	NM_144790.1	NM_144790.1		208258	21450138	NM_144790.1	Ankrd33	NP_659039.1	ILMN_2938256	002490152	S	1118	GGCCAAGCTGGAGGCAGCAAGTAAGACACATTCCCCGCCAGGGCCTCTTT	15	+	100950129-100950152:100950153-100950178	15qF2	Mus musculus ankyrin repeat domain 33 (Ankrd33), mRNA.				MGC31569; A930021G21Rik	MGC31569; A930021G21Rik
Mus musculus	RefSeq	ILMN_196992	ILMN_196992	LOC226413	XM_129479.2	XM_129479.2			38073302	XM_129479.2	LOC226413		ILMN_2526521	001580221	S	5771	GACAAGTCACCACCTCAAGTTGCAGAGAAGCCTGGCTGGCCACCATACTA										
Mus musculus	RefSeq	ILMN_196321	ILMN_196321	CLEC4B1	NM_027218.1	NM_027218.1		69810	13386213	NM_027218.1	Clec4b1	NP_081494.1	ILMN_2959372	000870112	S	343	GTGATCCATAGCCAGGAGGAGCAGGATTTCATCACTGGGATCTTGGACAT	6	+	123034191-123034213:123035275-123035301	6qF2	Mus musculus C-type lectin domain family 4, member b1 (Clec4b1), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Clec4b; Aplra2; DCARbeta; 1810046I24Rik; DCAR; mDcar2	Clec4b; Aplra2; DCARbeta; 1810046I24Rik; DCAR; mDcar2
Mus musculus	RefSeq	ILMN_200773	ILMN_200773	LOC384565	XM_357712.1	XM_357712.1			38085994	XM_357712.1	LOC384565		ILMN_1213906	000630747	S	25	AAGCTAGACCAGTGGGTGGAGCAGCTGAAGGAGAAGCTTGTGACACAGCC										
Mus musculus	Riken	ILMN_203158	ILMN_203158	PAX8	ri|6720473A10|PX00060D11|AK032920|3393					AK032920	Pax8		ILMN_1218213	006200746	S	3029	GGCTTTGAGGGGATGAGGAGGAGAGTTTCTTGGGAGGAGAACTGGTGTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_232240	ILMN_232240	EG330503	NM_001033540.1	NM_001033540.1		330503	85702042	NM_001033540.1	EG330503	NP_001028712.1	ILMN_2872499	006770333	S	2722	CTTAGTTGGATGTGGTGGCTCATGTCCTCTGGGCCTAGCACTCTGGAGGC	7	+	29888736-29888785	7qB1	Mus musculus predicted gene, EG330503 (EG330503), mRNA.				B430201F14	B430201F14
Mus musculus	MEEBO	ILMN_216539	ILMN_216539	NUDT7	scl33301.5.15_0				18859594	NM_024437	Nudt7		ILMN_2773276	004390762	S	572	GTCTTCGAGTACAAAGACCCTGAGACTGGTGTGAACTACCTAATCCAGGG						A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways involving a nucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with diphosphate on its glycose moiety [goid 9132] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15938] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated [goid 46356] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + H2O = CoA + acetate [goid 3986] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214995	ILMN_214995	RAB10	NM_016676.4	NM_016676.4		19325	142352796	NM_016676.4	Rab10	NP_057885.1	ILMN_2668608	005910309	S	777	GTGTATGACATCACCAACGGTAAAAGCTTTGAGAACATCAGCAAGTGGCT	12	-	3256882-3256931	12qA1.1	Mus musculus RAB10, member RAS oncogene family (Rab10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AW107754	AW107754
Mus musculus	RefSeq	ILMN_214995	ILMN_214995	RAB10	NM_016676.4	NM_016676.4		19325	142352796	NM_016676.4	Rab10	NP_057885.1	ILMN_2654296	003450450	S	2776	CCATGAATTTTTCAGATAGTGTCCCACAGACAATTCTACATGCCTCACTG	12	-	3248079-3248128	12qA1.1	Mus musculus RAB10, member RAS oncogene family (Rab10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AW107754	AW107754
Mus musculus	MEEBO	ILMN_192328	ILMN_192328	2900001A12RIK	scl7768.1.1_330				51767072	XM_484180	2900001A12Rik		ILMN_1241761	005260524	S	14	GTTTGGATTGTTTACAGCCTGGGGTATTGTGAATAAACCTATGGACATGG										
Mus musculus	Riken	ILMN_204947	ILMN_204947	D330004B08RIK	ri|D330004B08|PX00191C07|AK052181|1803					AK052181	D330004B08Rik		ILMN_1239641	002810142	S	1602	CAAGATGTGGGGCAGCATAGGAGTTGTAGCTGAGGAGAAGGTCGGGCCTG										
Mus musculus	RefSeq	ILMN_243304	ILMN_243304	TUBA1B	NM_011654.2	NM_011654.2		22143	111186463	NM_011654.2	Tuba1b	NP_035784.1	ILMN_2986393	002260576	S	999	GCTGCCTGCTATACCGTGGTGATGTGGTTCCCAAAGATGTCAATGCTGCC	15	-	98762375-98762424	15qF1	Mus musculus tubulin, alpha 1B (Tuba1b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC102558; MGC118411; Tuba2; MGC117866	MGC102558; MGC118411; Tuba2; MGC117866
Mus musculus	MEEBO	ILMN_224244	ILMN_224244	POLD4	scl069745.1_205				21312395	NM_027196	Pold4		ILMN_2777247	007650131	S	691	CACCAGATGCCCACCCGCCACACCCCTGACCTACGGTGTGGCAAATCCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence IMP]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221917	ILMN_221917	MID2	NM_011845.1	NM_011845.1		23947	6754693	NM_011845.1	Mid2	NP_035975.1	ILMN_2742013	005820408	S	3596	ACAGAAGTTGAGCTTCACAGCCTGTGATTTCACCATTTCTGTTGCGGAGA	X	+	136111404-136111453	XqF1	Mus musculus midline 2 (Mid2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Trim1; FXY2	Trim1; FXY2
Mus musculus	RefSeq	ILMN_258563	ILMN_258563	OLFR1203	NM_146896.1	NM_146896.1		258898	22129094	NM_146896.1	Olfr1203	NP_667107.1	ILMN_2939854	001300348	S	317	GCTGCATGGAGGTCTTTGTCCTCATTTTCATGGCTGTTGACCGTTATGTG	2	+	88671592-88671641	2qE1	Mus musculus olfactory receptor 1203 (Olfr1203), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR230-1	MOR230-1
Mus musculus	Riken	ILMN_206498	ILMN_206498	D630016F07RIK	ri|D630016F07|PX00196D14|AK085364|1919					AK085364	D630016F07Rik		ILMN_2580536	007050524	S	1632	GTTAAATACAGGGGCCCGGAGGTTTTCCACTTGCTGCTCTTCCAGATGTC										
Mus musculus	RefSeq	ILMN_196865	ILMN_196865	LOC238049	XM_137949.3	XM_137949.3			38049311	XM_137949.3	LOC238049		ILMN_1225203	002810292	S	1034	AGTATCTGAACAGCCCTAAACCCCCTGCGGGACTATGTGGCTACTCCAGC										
Mus musculus	MEEBO	ILMN_214562	ILMN_214562	LIP1	scl52537.9_557	NM_021460.1			11496258	NM_021460.1	Lip1		ILMN_1254191	003990437	S	2230	CCCAGCTTCTCCAGGAATAAATATCCTCTCTTCAGTTTCATCAGACCTCA										
Mus musculus	MEEBO	ILMN_214562	ILMN_214562	LIP1	scl52537.9_557	NM_021460.1			11496258	NM_021460.1	Lip1		ILMN_2649291	003840066	S	2215	GAAATCCAGTGTAATCCCAGCTTCTCCAGGAATAAATATCCTCTCTTCAG										
Mus musculus	Riken	ILMN_206999	ILMN_206999	6430531H12RIK	ri|6430531H12|PX00648M08|AK078240|3126					AK078240	6430531H12Rik		ILMN_1225262	000430600	S	2693	GACATTGGCTCTGGGCTTGATATTTGGCCTTTGTAGATGTGGACTAGGAG										
Mus musculus	Riken	ILMN_203796	ILMN_203796	A230069H10RIK	ri|A230069H10|PX00129J23|AK038863|2387					AK038863	A230069H10Rik		ILMN_1230718	000360040	S	2000	GGAGTGGGAAGAAAAGCTTCTAATGTTCCTGCGAGACACCCTGGCCGTAG										
Mus musculus	MEEBO	ILMN_190439	ILMN_190439	9930039A11RIK	scl41388.3_659				31342713	NM_177060	9930039A11Rik		ILMN_2470185	007100184	S	18	CCAGGGCCTGCGGTCCCAAAGAGCACTAATCGATATAGCAACAAACGGAA										
Mus musculus	Riken	ILMN_205806	ILMN_205806	A130035M07RIK	ri|A130035M07|PX00122J19|AK037669|2627					AK037669	A130035M07Rik		ILMN_1215029	002690687	S	2522	GGAGCCTTCAAGCTATTAACCAGGTGATGTAGGTGAGCAGGGCAAGCCCC										
Mus musculus	Riken	ILMN_205415	ILMN_205415	E130306L18RIK	ri|E130306L18|PX00208L11|AK053750|1041					AK053750	E130306L18Rik		ILMN_1240926	002000050	S	793	GTACTTGGAAGGTGGAGGCAGGGGGCTGGAGAGTTCAAGGCCAGACTCAC										
Mus musculus	Riken	ILMN_206228	ILMN_206228	1810073N04RIK	ri|D130096H20|PX00186P04|AK084120|1613					AK084120	1810073N04Rik		ILMN_2578541	005670452	S	1447	GATCTGCTTGGGGAGAGCTTGGAACCCAGTGCAAGAGAGACCAGAAACAG										
Mus musculus	RefSeq	ILMN_222475	ILMN_222475	PTPRJ	NM_008982.4	NM_008982.4		19271	115648014	NM_008982.4	Ptprj	NP_033008.2	ILMN_2750053	000940500	S	3840	CCGTGGACGTGTATGGGATTGTCTATGACCTTCGGATGCACAGGCCTCTG	2	-	90280028-90280077	2qE1	Mus musculus protein tyrosine phosphatase, receptor type, J (Ptprj), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	Scc-1; AI450271; Ptpb2; Byp; DEP-1; Scc1; CD148; BET; PTPbeta2	Scc-1; AI450271; Ptpb2; Byp; DEP-1; Scc1; CD148; BET; PTPbeta2
Mus musculus	RefSeq	ILMN_237740	ILMN_237740	GM1568	NM_001008423.1	NM_001008423.1		380768	56606028	NM_001008423.1	Gm1568	NP_001008423.1	ILMN_2863621	006560451	S	3800	GGTCATTTAGCATCCAAGGTGTGTGTGGGGCGGGGAGGGGTACTTGGTAC	12	-	81856955-81857004	12qD1	Mus musculus gene model 1568, (NCBI) (Gm1568), mRNA.				MGC91363	MGC91363
Mus musculus	RefSeq	ILMN_196965	ILMN_237740	GM1568	NM_001008423.1	NM_001008423.1		380768	56606028	NM_001008423.1	Gm1568	NP_001008423.1	ILMN_1253471	004390376	S	2342	TTCCATGTGCGGGAGAAGGTGCGGGAGGAGACCAACACGCGCTCTTTTGA	12	-	81858413-81858462	12qD1	Mus musculus gene model 1568, (NCBI) (Gm1568), mRNA.				MGC91363	MGC91363
Mus musculus	Riken	ILMN_202344	ILMN_202344	4930403G18RIK	ri|4930403G18|PX00029M01|AK015061|1508					AK015061	4930403G18Rik		ILMN_2548877	003190605	S	133	CGCAATGTATCGCCGAGAACCTTCCCTCAACATCAGACCTTGGCTTCATC										
Mus musculus	MEEBO	ILMN_189878	ILMN_189878	3110021E02RIK	scl073147.1_59						3110021E02Rik		ILMN_2465201	002690164	S	19	ACGTCGTCTCTGCCGCCGCGCACACTGCGCTTGGGTAAAGGCGTCTGAGA										
Mus musculus	RefSeq	ILMN_213735	ILMN_213735	PQLC3	NM_172574.1	NM_172574.1		217430	27369809	NM_172574.1	Pqlc3	NP_766162.1	ILMN_2730701	002370754	S	519	CAAGATTCAGGAGCTGTGAGCGCACTGACCTGGGGCCTTTCTGCCTACAC	12	-	17000266-17000315	12qA1.1	Mus musculus PQ loop repeat containing (Pqlc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C78076; E030024M05Rik	C78076; E030024M05Rik
Mus musculus	RefSeq	ILMN_213735	ILMN_213735	PQLC3	NM_172574.1	NM_172574.1		217430	27369809	NM_172574.1	Pqlc3	NP_766162.1	ILMN_2838317	005890523	S	1432	CCAAGCAGTCGTCCAACACAGTGTGCCTTACTAAACAGAGCCCCATCTGT	12	-	16995838-16995887	12qA1.1	Mus musculus PQ loop repeat containing (Pqlc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C78076; E030024M05Rik	C78076; E030024M05Rik
Mus musculus	RefSeq	ILMN_213735	ILMN_213735	PQLC3	NM_172574.1	NM_172574.1		217430	27369809	NM_172574.1	Pqlc3	NP_766162.1	ILMN_2640239	003180152	S	532	CTGTGAGCGCACTGACCTGGGGCCTTTCTGCCTACACCTGTGCAACAAGA	12	-	16999120-16999125:17000259-17000302	12qA1.1	Mus musculus PQ loop repeat containing (Pqlc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C78076; E030024M05Rik	C78076; E030024M05Rik
Mus musculus	RefSeq	ILMN_213735	ILMN_213735	PQLC3	NM_172574.1	NM_172574.1		217430	27369809	NM_172574.1	Pqlc3	NP_766162.1	ILMN_2749327	007650767	S	1487	CGAGGAAATCTCAACTGTCTCTCTATTTAAGCACAATCCCACCATTTTTT	12	-	16995783-16995832	12qA1.1	Mus musculus PQ loop repeat containing (Pqlc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C78076; E030024M05Rik	C78076; E030024M05Rik
Mus musculus	RefSeq	ILMN_201468	ILMN_201468	LOC385226	XM_358129.1	XM_358129.1			38094033	XM_358129.1	LOC385226		ILMN_1225389	006220608	S	165	GGCTTTGGGCAGAATTCCTCAGACGATGGACAATGCCAAGCGCATGGAAA										
Mus musculus	RefSeq	ILMN_223752	ILMN_223752	ATP1B4	NM_133690.2	NM_133690.2		67821	118130945	NM_133690.2	Atp1b4	NP_598451.1	ILMN_2768612	006370632	S	3849	GGCTCCCATACTGTGCTGTACCAGGATTTGATTTCTATACCATCTGTTGC	X	+	35689677-35689726	XqA3.3	Mus musculus ATPase, (Na+)/K+ transporting, beta 4 polypeptide (Atp1b4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]	1110020B02Rik	1110020B02Rik
Mus musculus	RefSeq	ILMN_222871	ILMN_222871	DNAJC15	NM_025384.3	NM_025384.3		66148	31982148	NM_025384.3	Dnajc15	NP_079660.1	ILMN_2813454	001450066	S	294	GCGAGAGGCTAGTCTTATTTTAGGTGTAAGCCCATCTGCTGGCAAGGCCA	14	-	78240025-78240045:78244203-78244231	14qD3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 15 (Dnajc15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	1110003P16Rik; Dnajd1	1110003P16Rik; Dnajd1
Mus musculus	RefSeq	ILMN_185877	ILMN_233250	DCBLD2	NM_028523.3	NM_028523.3		73379	84579946	NM_028523.3	Dcbld2	NP_082799.2	ILMN_2430775	007050441	S	5941	CCTGCCACTGTCCCTGCCGGCAACTCCACAACCCTCAAGCCTACCTTATG	16	+	58469312-58469361	16qC1.2	Mus musculus discoidin, CUB and LCCL domain containing 2 (Dcbld2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]		AW146002; Esdn; CLCP1; 1700055P21Rik	AW146002; Esdn; CLCP1; 1700055P21Rik
Mus musculus	RefSeq	ILMN_213629	ILMN_213629	DHRS2	NM_027790.1	NM_027790.1		71412	13386259	NM_027790.1	Dhrs2	NP_082066.1	ILMN_2639136	001090646	S	1189	CCAGGTCATATAGGGATACTTACTGAAATGTTGTGAAGGAAAGCAGGTGT	14	+	55860191-55860240	14qC3	Mus musculus dehydrogenase/reductase member 2 (Dhrs2), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	5430405K24Rik; MGC143467; SDR family	5430405K24Rik; MGC143467; SDR family
Mus musculus	RefSeq	ILMN_208797	ILMN_208797	SLC25A25	NM_146118.2	NM_146118.2		227731	31560753	NM_146118.2	Slc25a25	NP_666230.2	ILMN_1216597	003440070	S	3003	CGACAAGGCAGTGAGGTGCTTCACCAGGAATTTGGTTTGAGGGTGAGGAC	2	-	32270248-32270297	2qB	Mus musculus solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25 (Slc25a25), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC36388; MCSC; 1110030N17Rik; mKIAA1896	MGC36388; MCSC; 1110030N17Rik; mKIAA1896
Mus musculus	RefSeq	ILMN_212729	ILMN_212729	CCDC59	NM_025602.1	NM_025602.1		52713	13385057	NM_025602.1	Ccdc59	NP_079878.1	ILMN_2877436	003520463	S	675	GACTAAAAAGGGCCAGCCTAACCTGAATTTACAGATGGAGTATCTTCTGC	10	+	105251217-105251266	10qD1	Mus musculus coiled-coil domain containing 59 (Ccdc59), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		D10Ertd718e; 2300004H16Rik	D10Ertd718e; 2300004H16Rik
Mus musculus	RefSeq	ILMN_217372	ILMN_217372	KRTAP4-7	NM_029613.1	NM_029613.1		76444	21539646	NM_029613.1	Krtap4-7	NP_083889.1	ILMN_2682462	004040703	S	833	CTCAGGTTGACTTCAATAGTTCTCTACTGTTGATCTTCATAGTCCCCGAC	11	-	99504521-99504570	11qD	Mus musculus keratin associated protein 4-7 (Krtap4-7), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			KRTAP4.7; 2310037K05Rik; KAP4.7	KRTAP4.7; 2310037K05Rik; KAP4.7
Mus musculus	RefSeq	ILMN_185323	ILMN_227353	GPR137B	NM_031999.2	NM_031999.2		83924	148612871	NM_031999.2	Gpr137b	NP_114388.2	ILMN_2426079	004540411	S	2492	GAGCCCAGTTTCCAGTGGGTTGTAATGGGGTCTTCGTTGTACAGAGGACG				13qA1	Mus musculus G protein-coupled receptor 137B (Gpr137b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C80741; D13Abb1e; C730041E01; AW546472; Tm7sf1; AU016435; C80550	C80741; D13Abb1e; C730041E01; AW546472; Tm7sf1; AU016435; C80550
Mus musculus	Riken	ILMN_204090	ILMN_204090	B130065N20RIK	ri|B130065N20|PX00158G16|AK045331|4538					AK045331	B130065N20Rik		ILMN_2562287	003610181	S	4311	GCCCTGAAATAGTGTGTCTCCAATAGACAGGAGAGTATGGAAGGGAGGAC										
Mus musculus	MEEBO	ILMN_210750	ILMN_210750	LOC385291	IGKV4-54_AJ231223_Ig_kappa_variable_4-54_15	XM_358173.1			38096811	XM_358173.1	LOC385291		ILMN_2608768	003870307	S	32	GCTAATCAGTGCCTCAGTCATAATGTCCAGGGGACAAATTGTTCTCACCC										
Mus musculus	RefSeq	ILMN_215498	ILMN_215498	SRPK1	NM_016795.3	NM_016795.3		20815	141803405	NM_016795.3	Srpk1	NP_058075.2	ILMN_1217753	000610358	S	2312	TCTTTATTCACTGACTCTGAGAGTCACACTTTCTCGTGCACATCCGCCGC	17	-	28736537-28736586	17qA3.3	Mus musculus serine/arginine-rich protein specific kinase 1 (Srpk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of mRNA processing, those processes involved in the conversion of a primary mRNA transcript into a mature mRNA prior to its translation into polypeptide [goid 50684] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AU017960	AU017960
Mus musculus	MEEBO	ILMN_191592	ILMN_191592	SCL0003238.1_3	scl0003238.1_3	AK050009.1			26340737	AK050009.1	scl0003238.1_3		ILMN_2480447	003180670	S	5	GTCAGGATTGGGTTTCAGGTCAGAAGGACGGTGCAGAGGAAGAGAACACA										
Mus musculus	MEEBO	ILMN_195305	ILMN_195305	SCL0002270.1_1	scl0002270.1_1	AK039592.1			26333354	AK039592.1	scl0002270.1_1		ILMN_2514385	003180441	S	19	CGCGGCTGCCCGCTCTCCCAGGGGGAGGAAAGCTCTTATTTTTTGCATTT										
Mus musculus	MEEBO	ILMN_189145	ILMN_189145	IGKV4-75_AJ231227_IG_KAPPA_VARIABLE_4-75_15	IGKV4-75_AJ231227_Ig_kappa_variable_4-75_15						IGKV4-75_AJ231227_Ig_kappa_variable_4-75_15		ILMN_1212777	006480041	S	19	GTTAAACAGTGTCTCAGTCATAATATCCAGAGGAAAAAATGTGCTGACCC										
Mus musculus	Riken	ILMN_204383	ILMN_204383	9930005E07RIK	ri|9930005E07|PX00119D23|AK036771|1446					AK036771	9930005E07Rik		ILMN_1254909	000520020	S	981	GGGCCCCCAGGTCACTGGAGCGTGATCCCGAAAGAGGATTAGATTATAGG										
Mus musculus	Riken	ILMN_206478	ILMN_206478	D430011E20RIK	ri|D430011E20|PX00193L16|AK084916|3722					AK084916	D430011E20Rik		ILMN_1250432	004780754	S	3637	ACCACGTGGGTCCCAGGACTGAATTTTGGTGCTTGAGGGAAGAAAGCTCC										
Mus musculus	MEEBO	ILMN_194692	ILMN_194692	9430041J06RIK	scl0319779.1_15						9430041J06Rik		ILMN_2508727	003420382	S	14	TGCCTAGTTAAACACAAACCTATAGCCGGGTATACTTATCCAACCATCCT										
Mus musculus	RefSeq	ILMN_211803	ILMN_211803	PELI3	NM_172835.2	NM_172835.2		240518	31982118	NM_172835.2	Peli3	NP_766423.2	ILMN_2619678	002510703	S	1639	TGATCCCAGGCATACTGATAGGGACTTTAGCACCAGCTCTGCCCCAGGCT	19	-	4932061-4932110	19qA	Mus musculus pellino 3 (Peli3), mRNA.				A930011L17; MGC30417; 6030441F14Rik; BC028931	A930011L17; MGC30417; 6030441F14Rik; BC028931
Mus musculus	RefSeq	ILMN_211803	ILMN_211803	PELI3	NM_172835.2	NM_172835.2		240518	31982118	NM_172835.2	Peli3	NP_766423.2	ILMN_1239882	007330010	S	1779	CCCCCGACCTCCAGCTTAGACTGGTTGTGCCCTGAACCTGCCAATGCAGG	19	-	4931921-4931970	19qA	Mus musculus pellino 3 (Peli3), mRNA.				A930011L17; MGC30417; 6030441F14Rik; BC028931	A930011L17; MGC30417; 6030441F14Rik; BC028931
Mus musculus	RefSeq	ILMN_223328	ILMN_223328	PTCD3	NM_027275.3	NM_027275.3		69956	91982770	NM_027275.3	Ptcd3	NP_081551.2	ILMN_1228040	000990326	S	2061	GTGACAGTGACGACAAATGAGAGAGAGAGGTGGCTCACAATAGCTGCTGG	6	-	71831116-71831146:71831147-71831165	6qC1	Mus musculus pentatricopeptide repeat domain 3 (Ptcd3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			2610034F17Rik; AU045708; 2810422B04Rik	2610034F17Rik; AU045708; 2810422B04Rik
Mus musculus	Riken	ILMN_205269	ILMN_205269	E130309A10RIK	ri|E130309A10|PX00312D24|AK053797|2611					AK053797	E130309A10Rik		ILMN_1214043	004590463	S	1638	GGAAAGAGATAGGAACTCTGGGAGTCAGGCATGGGAGGTTTTGCCAGCCA										
Mus musculus	RefSeq	ILMN_213119	ILMN_213119	4930562D19RIK	NM_177616.3	NM_177616.3		216516	114145527	NM_177616.3	4930562D19Rik	NP_808284.2	ILMN_2670624	001510059	S	2540	AACCGTCAGGCTGGTTCTACATACCAGCCCCAGGAGCGGCCCACGTAACC	11	-	4043689-4043691:4043692-4043738	11qA1	Mus musculus RIKEN cDNA 4930562D19 gene (4930562D19Rik), mRNA.				RP23-453B22.3; KIAA1656; mKIAA1656	RP23-453B22.3; KIAA1656; mKIAA1656
Mus musculus	RefSeq	ILMN_213119	ILMN_213119	4930562D19RIK	NM_177616.3	NM_177616.3		216516	114145527	NM_177616.3	4930562D19Rik	NP_808284.2	ILMN_2633854	004480484	S	2528	AAGCTTTCACCGAACCGTCAGGCTGGTTCTACATACCAGCCCCAGGAGCG	11	-	4043701-4043750	11qA1	Mus musculus RIKEN cDNA 4930562D19 gene (4930562D19Rik), mRNA.				RP23-453B22.3; KIAA1656; mKIAA1656	RP23-453B22.3; KIAA1656; mKIAA1656
Mus musculus	RefSeq	ILMN_214491	ILMN_214491	CASP7	NM_007611.2	NM_007611.2		12369	133891757	NM_007611.2	Casp7	NP_031637.1	ILMN_2648548	004560612	S	1829	ACCAAAGGCCTCCCCAGGCCTGTGCCCATATCCACCAGCGCCTTATAATT	19	+	56516313-56516362	19qD2	Mus musculus caspase 7 (Casp7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IGI]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IGI]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	CMH-1; AI314680; caspase-7; ICE-IAP3; mCASP-7; Mch3	CMH-1; AI314680; caspase-7; ICE-IAP3; mCASP-7; Mch3
Mus musculus	RefSeq	ILMN_211373	ILMN_211373	BST2	NM_198095.2	NM_198095.2		69550	142366701	NM_198095.2	Bst2	NP_932763.1	ILMN_1224110	002100139	S	622	CACTAGGGGGCTCCAGATTGGGTCTTCCTCCGCAGAACTTTAGGACTGGG	8	-	74058255-74058304	8qB3.3	Mus musculus bone marrow stromal cell antigen 2 (Bst2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			DAMP-1; C87040; 2310015I10Rik	DAMP-1; C87040; 2310015I10Rik
Mus musculus	RefSeq	ILMN_210526	ILMN_210526	GPR88	NM_022427.1	NM_022427.1		64378	11967952	NM_022427.1	Gpr88	NP_071872.1	ILMN_1215624	001470725	S	3092	GGAGGCCTAGACCAGTCTGTTATCCACATAAAATCTGGGGCCAAATAGCC	3	-	115952850-115952899	3qG1	Mus musculus G-protein coupled receptor 88 (Gpr88), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISS]	Strg; AW061286	Strg; AW061286
Mus musculus	RefSeq	ILMN_196963	ILMN_196963	LOC227435	XM_136854.2	XM_136854.2			38050445	XM_136854.2	LOC227435		ILMN_1249110	004010646	S	784	GCTGAAGGAGACCTCATTACCAGCACCTCCAAGGTGGCTCCATTGGACTC										
Mus musculus	MEEBO	ILMN_190544	ILMN_190544	1700110M21RIK	scl45205.3.84_80						1700110M21Rik		ILMN_2471068	002260452	S	18	TCGCTGCATCCCCAAAGGCCGGGCCTTCTGTCTCAAAGAGGTCTGTGACT										
Mus musculus	RefSeq	ILMN_199364	ILMN_199364	MPV17L	NM_033564.2	NM_033564.2		93734	141802470	NM_033564.2	Mpv17l	NP_291042.2	ILMN_1220761	005090356	S	2714	GTCACTTTGTGGGTGGACTTTGAGGTCCTATGCTCACTCAAGCTCTGCCC	16	+	13949128-13949177	16qA1	Mus musculus Mpv17 transgene, kidney disease mutant-like (Mpv17l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	M-LP	M-LP
Mus musculus	RefSeq	ILMN_199364	ILMN_199364	MPV17L	NM_033564.2	NM_033564.2		93734	141802470	NM_033564.2	Mpv17l	NP_291042.2	ILMN_2760892	004560167	S	2572	AGTGAGGAAGGAGGCAGAAGGGGGATGGATGGAGCAGGAAGCATGAAGTG	16	+	13948986-13949035	16qA1	Mus musculus Mpv17 transgene, kidney disease mutant-like (Mpv17l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	M-LP	M-LP
Mus musculus	RefSeq	ILMN_217156	ILMN_217156	RABL4	NM_025931.2	NM_025931.2		67042	27754106	NM_025931.2	Rabl4	NP_080207.1	ILMN_2679711	006840347	S	847	ATATTCCATACCCTGGTGTGAGGGTACAGTGGACTGTCCTGAAGGGCTGC	15	-	77990010-77990039:77990040-77990059	15qE1	Mus musculus RAB, member of RAS oncogene family-like 4 (Rabl4), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2600013G09Rik	2600013G09Rik
Mus musculus	RefSeq	ILMN_217156	ILMN_217156	RABL4	NM_025931.2	NM_025931.2		67042	27754106	NM_025931.2	Rabl4	NP_080207.1	ILMN_1215009	000520463	S	674	CTAAGACAGACCTGGCTGGCCGACAAACAGTGGATTCAGCTCAGGCCCAG	15	-	77994664-77994713	15qE1	Mus musculus RAB, member of RAS oncogene family-like 4 (Rabl4), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2600013G09Rik	2600013G09Rik
Mus musculus	RefSeq	ILMN_196569	ILMN_196569	CHI3L4	NM_145126.1	NM_145126.1		104183	21553078	NM_145126.1	Chi3l4	NP_660108.1	ILMN_1222707	005570327	S	862	GCTGGACCACCAGGAAAGTACACAAATGAACAAGGACTCCTGGCTTACTT	3	-	106008920-106008969	3qF2.2	Mus musculus chitinase 3-like 4 (Chi3l4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]	Ym2	Ym2
Mus musculus	RefSeq	ILMN_196569	ILMN_196569	CHI3L4	NM_145126.1	NM_145126.1		104183	21553078	NM_145126.1	Chi3l4	NP_660108.1	ILMN_2524865	002600180	S	1092	GGATGACTTCAGTGGTTCTTTCTGTCACCAGGGACGTTTCCCTCTGACAA	3	-	106007053-106007102	3qF2.2	Mus musculus chitinase 3-like 4 (Chi3l4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]	Ym2	Ym2
Mus musculus	RefSeq	ILMN_201298	ILMN_201298	LOC382391	XM_356482.1	XM_356482.1			38090635	XM_356482.1	LOC382391		ILMN_1238409	007570288	S	113	CCTTCAGTGCCCAGATTCCTCCTCCAGATCCAAATGGGGGCCAGTGTGCA										
Mus musculus	RefSeq	ILMN_200801	ILMN_200801	LOC384579	XM_357723.1	XM_357723.1			38086246	XM_357723.1	LOC384579		ILMN_2540058	001410066	S	132	CACCAACAAATCACGAAGGTGCCATCATGGCGCGGCCTTTGAAACCCTGC										
Mus musculus	RefSeq	ILMN_197515	ILMN_197515	LOC380916	XM_354827.1	XM_354827.1			38076385	XM_354827.1	LOC380916		ILMN_2528405	004730400	S	3803	AGGCCAAAGAACAGATTCCTCTGGGACTCATTGTCCTCCACCTGAATGAC										
Mus musculus	RefSeq	ILMN_200941	ILMN_200941	LOC382262	XM_358723.1	XM_358723.1			38087202	XM_358723.1	LOC382262		ILMN_1257165	002030348	S	554	TTCTCTGTCCCGTTGGCAGAAAGTGTGGGGGTCTACTGGGCTTAGGTGCC										
Mus musculus	Riken	ILMN_203498	ILMN_203498	C430014K22RIK	ri|C430014K22|PX00078J13|AK049456|2834					AK049456	C430014K22Rik		ILMN_2557762	002600722	S	2654	CACATGGGTGATTCCTGACCTCAACACCTGGCTGGATTATCGTTTTAGGC										
Mus musculus	RefSeq	ILMN_222332	ILMN_222332	CFLAR	NM_207653.3	NM_207653.3		12633	131887384	NM_207653.3	Cflar	NP_997536.1	ILMN_2748129	000020427	S	2497	TATGTCTGTTTAATATCTACAGTCTAATGCTTTGTAAGACATCTAGATAG	1	+	58811312-58811361	1qC1.3	Mus musculus CASP8 and FADD-like apoptosis regulator (Cflar), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	I-FLICE; Flip; 2310024N18Rik; Cash; AI646576; c-Flip; Casper; MGC103395; CLARP; A430105C05Rik; MRIT; FLAME	I-FLICE; Flip; 2310024N18Rik; Cash; AI646576; c-Flip; Casper; MGC103395; CLARP; A430105C05Rik; MRIT; FLAME
Mus musculus	RefSeq	ILMN_213077	ILMN_213077	CUL2	NM_029402.2	NM_029402.2		71745	142345649	NM_029402.2	Cul2	NP_083678.1	ILMN_1238615	007510204	S	3028	GGCTGGCAGAAAAGAACTGCTCACTCTTGACCCATTCTTCATGATACATC	18	+	3435716-3435765	18qA1	Mus musculus cullin 2 (Cul2), mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA4106; AI327301; 4932411N15Rik; KIAA4106; 1300003D18Rik	mKIAA4106; AI327301; 4932411N15Rik; KIAA4106; 1300003D18Rik
Mus musculus	RefSeq	ILMN_212787	ILMN_212787	JUB	NM_010590.2	NM_010590.2		16475	31981661	NM_010590.2	Jub	NP_034720.2	ILMN_2630318	001240224	S	1210	CAAAGGTATCTATGGGCAGAGCAATGCCTGCCAGGCCCTGGACAGCCTCT	14	-	53527624-53527673	14qC3	Mus musculus ajuba (Jub), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IMP]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IMP]; The migration of epithelial cells along or through a wound gap to reestablish a continuous epithelium [goid 35313] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_213791	ILMN_312958	LOC100042500	XM_001479358.1	XM_001479358.1		100042500	149262539	XM_001479358.1	LOC100042500	XP_001479408.1	ILMN_1244553	005090576	S	2095	TGTTTGTTAAATGATACCAGACGCTTATGGTGGGCACCTTGGGCTGGGAC	11	+	102747964-102748013	11qE1	PREDICTED: Mus musculus similar to Coiled-coil domain containing 103 (LOC100042500), mRNA.					
Mus musculus	MEEBO	ILMN_189173	ILMN_189173	BZW1	scl17934.1.1947_17				27229011	NM_025824	Bzw1		ILMN_2458986	001190019	S	16	TTTTCCATTATCCAAACCCCCCAGAAACCTTTTCCCCTAATAGCACCCCA							Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	MEEBO	ILMN_189173	ILMN_189173	BZW1	scl17934.1.1947_17				27229011	NM_025824	Bzw1		ILMN_2729861	006900017	S	2538	CTTTAGTGGACATTGCCCATTTTGAAGGTGCCATTCTTAGAAGCCAAGAA							Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_198034	ILMN_198034	LOC332788	XM_285750.2	XM_285750.2			38080728	XM_285750.2	LOC332788		ILMN_1238820	006420138	S	1075	TCGCAGGAGCTGGAGAGGTTGCAGGCGAGACTGCAGATGCAGATCCTGAA										
Mus musculus	RefSeq	ILMN_188814	ILMN_255753	CASKIN2	NM_080643.2	NM_080643.2		140721	31981529	NM_080643.2	Caskin2	NP_542374.2	ILMN_1259822	002940474	S	4630	GGGCAGTGAGGTAACAGATCCCCAGGGCCCAGACTCTTACAACTGTACAT	11	-	115660708-115660757	11qE2	Mus musculus CASK-interacting protein 2 (Caskin2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1139	mKIAA1139
Mus musculus	MEEBO	ILMN_213759	ILMN_213759	FH1	scl15890.11.1_28				33859553	NM_010209	Fh1		ILMN_2771754	004860435	S	1417	CCGCACACAAGAACGGATCAACCTTAAAGGAAACGGCTATTGAACTTGGC						Any of the heteromeric enzymes that act in the TCA cycle [goid 45239] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving fumarate, the anion of trans-1,2-ethenedicarboxylic acid, the diastereoisomer of maleate. It is a key intermediate in metabolism and is formed in the TCA cycle from succinate and converted into malate [goid 6106] [evidence IEA]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-malate = fumarate + H2O [goid 4333] [evidence IEA]		
Mus musculus	Riken	ILMN_203530	ILMN_203530	5330430O04RIK	ri|5330430O04|PX00054M16|AK030553|2685					AK030553	5330430O04Rik		ILMN_1250408	001170088	S	761	CCTAACACGAGCGATGTCTGGATTTCTAACCCTGCTAGGCACTGATTATC										
Mus musculus	MEEBO	ILMN_184536	ILMN_184536	6030455H03RIK	scl41369.3.1_1						6030455H03Rik		ILMN_2419464	005910270	S	16	ATGTTGCCTCGGGGCTGTCCGATCACACGCACGATCCGAGTGACTGGGGA										
Mus musculus	RefSeq	ILMN_217748	ILMN_217748	ARSJ	NM_173451.1	NM_173451.1		271970	27734087	NM_173451.1	Arsj	NP_775627.1	ILMN_2844040	000160255	S	3246	CGTGGACAGCTTGTATCTCATCTTATCCTGCTTAAAGAAACGGCAGATAG	3	+	126431952-126432001	3qG1	Mus musculus arylsulfatase J (Arsj), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the hydrolysis of the 4-sulfate groups of the N-acetyl-D-galactosamine 4-sulfate units of chondroitin sulfate and dermatan sulfate [goid 3943] [evidence IEA]	D830047F08; 9330196J05Rik	D830047F08; 9330196J05Rik
Mus musculus	Riken	ILMN_202859	ILMN_202859	4933426E01RIK	ri|4933426E01|PX00020F16|AK030230|2527					AK030230	4933426E01Rik		ILMN_2552853	004760358	S	579	CTGGGTAACTGGTTCAGAAAGTGGTGGCAGTTCCAGTGGCAGTGGCGATG										
Mus musculus	RefSeq	ILMN_214467	ILMN_214467	LSM11	NM_028185.2	NM_028185.2		72290	115311556	NM_028185.2	Lsm11	NP_082461.1	ILMN_2648277	001980059	S	3348	GAATAGAACGAATTTCTGTCATCCCGGTGACCCTCCTGGTGCCGGGCTCT	11	-	45744826-45744875	11qB1.1	Mus musculus U7 snRNP-specific Sm-like protein LSM11 (Lsm11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	2210404M20Rik; AV079530; RP23-298M7.5	2210404M20Rik; AV079530; RP23-298M7.5
Mus musculus	RefSeq	ILMN_188763	ILMN_188763	VPS4B	NM_009190.1	NM_009190.1		20479	6677980	NM_009190.1	Vps4b	NP_033216.1	ILMN_2455501	000730685	S	2741	TGATTGCCTTTGGGTTTTGTGTACAGACTATTTTTGTTGATATTCAATGA	1	-	108667797-108667846	1qE2.1	Mus musculus vacuolar protein sorting 4b (yeast) (Vps4b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence ISO]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Skd1; 8030489C12Rik	Skd1; 8030489C12Rik
Mus musculus	RefSeq	ILMN_200821	ILMN_200821	LOC385361	XM_358207.1	XM_358207.1			38086361	XM_358207.1	LOC385361		ILMN_2540126	001240291	S	53	TGGTCACACAGCGTTACTACTCCCCTCCAGTCTACATTACGTCCCTGGAG										
Mus musculus	Riken	ILMN_202386	ILMN_202386	4930540C21RIK	ri|4930540C21|PX00034P05|AK016006|1307					AK016006	4930540C21Rik		ILMN_2549215	002140438	S	995	GATCTGAGGTAGATCCCGAACATCTATATAAAATCTGGTTGGTGCTCATC										
Mus musculus	RefSeq	ILMN_185943	ILMN_233405	ZUFSP	NM_028287.1	NM_028287.1		72580	30794379	NM_028287.1	Zufsp	NP_082563.1	ILMN_2668850	006860709	S	2294	GAGATCATCATTTTCTCTCCAGTGAGAGAATATCAGCTGTAGAAGATTCC	10	-	33646765-33646814	10qB1	Mus musculus zinc finger with UFM1-specific peptidase domain (Zufsp), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC107205	MGC107205
Mus musculus	RefSeq	ILMN_201290	ILMN_201290	LOC382376	XM_356471.1	XM_356471.1			38090604	XM_356471.1	LOC382376		ILMN_1250125	003170736	S	117	GCAGATGCAGCAGATTCGCATGGGACACCTGGAGAATAACCCAGCTCTGG										
Mus musculus	RefSeq	ILMN_212162	ILMN_212162	1200014J11RIK	NM_025818.2	NM_025818.2		66874	141802919	NM_025818.2	1200014J11Rik	NP_080094.2	ILMN_2623480	001230523	S	2472	GGCTGGTAGCCTGGTGTAAAGACCAAGTTCAGTGCTGTAGGACTTCTAGG	11	+	72893282-72893331	11qB4	Mus musculus RIKEN cDNA 1200014J11 gene (1200014J11Rik), mRNA.				RP23-263M10.5	RP23-263M10.5
Mus musculus	RefSeq	ILMN_198709	ILMN_198709	LOC195806	XM_111995.2	XM_111995.2			38086980	XM_111995.2	LOC195806		ILMN_1258165	005310390	S	52	GCTTATCAGGTAATTAGCCAAGCTGCAAAGAACAAGGGCCGTATCTCCCG										
Mus musculus	RefSeq	ILMN_222400	ILMN_222400	SLC29A3	NM_023596.3	NM_023596.3		71279	110347496	NM_023596.3	Slc29a3	NP_076085.1	ILMN_2961091	004290367	S	4956	ACATGCTGGTTCCTGGGCTCTGTGCCTGAGGGCAGGCTAACTAGCTGGAA	10	-	60175054-60175103	10qB4	Mus musculus solute carrier family 29 (nucleoside transporters), member 3 (Slc29a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other [goid 5337] [evidence IEA]	AW987637; Ent3; 4933435C21Rik	AW987637; Ent3; 4933435C21Rik
Mus musculus	RefSeq	ILMN_219270	ILMN_219270	NXF1	NM_016813.2	NM_016813.2		53319	31980797	NM_016813.2	Nxf1	NP_058093.2	ILMN_1254333	004280167	S	1988	CACAAGAAAAGTCCCCTTGTAAATAGCCCCTGGATAATATTGTCTGGCTG	19	+	8845104-8845153	19qA	Mus musculus nuclear RNA export factor 1 homolog (S. cerevisiae) (Nxf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IDA]; Intranuclear foci at which aggregated proteins have been sequestered [goid 42405] [evidence IDA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of RNA from the nucleus to the cytoplasm [goid 6405] [evidence IDA]; The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm [goid 16973] [evidence IPI]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]	Mex67; Mvb1; Tap	Mex67; Mvb1; Tap
Mus musculus	RefSeq	ILMN_201006	ILMN_254399	LOC384710	XR_003896.1	XR_003896.1		384710	94418349	XR_003896.1	LOC384710		ILMN_1237033	004280519	S	636	CAATGTGGCCAGCATCTGTCTGCAGAGGACTGTTGCCTCGGTGCCACACT				7qA1	PREDICTED: Mus musculus similar to 60S acidic ribosomal protein P0 (L10E) (LOC384710), mRNA.					
Mus musculus	MEEBO	ILMN_195635	ILMN_195635	TSSC6	scl00078.1_60				15182961	AY039000	Tssc6		ILMN_1249740	002340564	S	20	CGAATCAAGATTGCCAAATGCCAGATACTGATCACCAACTTCCTAGTCTT										
Mus musculus	Riken	ILMN_204035	ILMN_204035	ADRA1A, GPCR	ri|A730021M07|PX00149I15|AK042759|2342					AK042759	Adra1a, GPCR		ILMN_2561865	002600327	S	1769	TTGAACAGTGTGGAGAGAAAAGGCTCACAGAACCACGGACACAGCTCCGG										
Mus musculus	RefSeq	ILMN_192609	ILMN_245981	RIT1	NM_009069.3	NM_009069.3		19769	141802723	NM_009069.3	Rit1	NP_033095.1	ILMN_1228359	005910427	S	996	TCCCACGCATGAACTCATCAGGGCCGTGTCTACTCCTTAATTGTCACATT	3	+	88533467-88533516	3qF1	Mus musculus Ras-like without CAAX 1 (Rit1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IDA]	Rit; RIBB; ROC1	Rit; RIBB; ROC1
Mus musculus	RefSeq	ILMN_217540	ILMN_217540	SNAPC2	NM_133968.1	NM_133968.1		102209	19527187	NM_133968.1	Snapc2	NP_598729.1	ILMN_1215174	001010504	S	889	AGACCGCTCTCCCTGGAGAGAAGAGGCCCAGGCCTGGGACTGAAGATGGA	8	+	4255595-4255644	8qA1.1	Mus musculus small nuclear RNA activating complex, polypeptide 2 (Snapc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AU015675; 0610007H10Rik	AU015675; 0610007H10Rik
Mus musculus	RefSeq	ILMN_208732	ILMN_208732	RAB8B	NM_173413.2	NM_173413.2		235442	40254271	NM_173413.2	Rab8b	NP_775589.1	ILMN_1223029	001440192	S	4382	CCTGTGGCCTTACGGATGGGTTTGTCTTGACTGTTTGCAACTGATGCTGC	9	-	66691772-66691821	9qC	Mus musculus RAB8B, member RAS oncogene family (Rab8b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	D330025I23Rik; 5930437D16	D330025I23Rik; 5930437D16
Mus musculus	RefSeq	ILMN_208732	ILMN_208732	RAB8B	NM_173413.2	NM_173413.2		235442	40254271	NM_173413.2	Rab8b	NP_775589.1	ILMN_2588995	000450309	S	4548	GTGGCTTACTGTGGGAAGCTCCTGTGGATAGTATGGACCTGCCATGTGGC	9	-	66691606-66691655	9qC	Mus musculus RAB8B, member RAS oncogene family (Rab8b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	D330025I23Rik; 5930437D16	D330025I23Rik; 5930437D16
Mus musculus	RefSeq	ILMN_186100	ILMN_233234	GTF2IRD1	NM_001081468.1	NM_001081468.1		57080	125625342	NM_001081468.1	Gtf2ird1	NP_001074937.1	ILMN_1221960	002140537	S	80	CCCTCTACTGATCCTGTCCCCCATTCCCGGATTATTAACTCAGCAACCAG	5	-	134932473-134932522	5qG2	Mus musculus general transcription factor II I repeat domain-containing 1 (Gtf2ird1), transcript variant 8, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	WBSCR11; BEN; MGC102438; ESTM9; MusTRD1; 1700012P16Rik; Cream1; Gtf2il; X83320; GTF3	WBSCR11; BEN; MGC102438; ESTM9; MusTRD1; 1700012P16Rik; Cream1; Gtf2il; X83320; GTF3
Mus musculus	RefSeq	ILMN_186100	ILMN_233234	GTF2IRD1	NM_001081468.1	NM_001081468.1		57080	125625342	NM_001081468.1	Gtf2ird1	NP_001074937.1	ILMN_2656631	002680730	S	2404	TGGGACTGAATCGGCCTGTGCTGGTCCCTTACAAACTGATCCGGGACAGC	5	-	134878062-134878085:134879602-134879627	5qG2	Mus musculus general transcription factor II I repeat domain-containing 1 (Gtf2ird1), transcript variant 8, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	WBSCR11; BEN; MGC102438; ESTM9; MusTRD1; 1700012P16Rik; Cream1; Gtf2il; X83320; GTF3	WBSCR11; BEN; MGC102438; ESTM9; MusTRD1; 1700012P16Rik; Cream1; Gtf2il; X83320; GTF3
Mus musculus	MEEBO	ILMN_188478	ILMN_188478	ROBO2	scl48317.1.1094_16				31342155	NM_175549	Robo2		ILMN_2619401	000990608	S	2670	CATTATGGGAACTGTAGGAGACCCCTAAACCTGTCAAGAGTTGTGGTACA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]		
Mus musculus	MEEBO	ILMN_188478	ILMN_188478	ROBO2	scl48317.1.1094_16				31342155	NM_175549	Robo2		ILMN_1227705	002570309	S	1	CCCACTGTCGTTTACTTGAGTGGACAAACAGTATCCCAAGTCTCAAAGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]		
Mus musculus	Riken	ILMN_205922	ILMN_205922	MALT-1	ri|B130046C19|PX00158F13|AK045200|4316					AK045200	MALT-1		ILMN_1244953	004070768	S	4055	CATCCAGACAAAGCGGTAGCTGCTGTATTCTGTAGTGAGAAGCACACGTG										
Mus musculus	RefSeq	ILMN_185441	ILMN_185441	UXT	NM_013840.2	NM_013840.2		22294	30841022	NM_013840.2	Uxt	NP_038868.2	ILMN_2427063	006620753	S	1	TACAAGGCCTGCAGAATTTCCCAGAGCCATCTCCCCATTGACTGCATCTT	X	-	20118740-20118745:20118893-20118936	XqA1.3	Mus musculus ubiquitously expressed transcript (Uxt), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISS]; A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species [goid 930] [evidence ISS]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51297] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence ISS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with the microtubule constituent protein beta-tubulin [goid 48487] [evidence ISS]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	0910002B17Rik	0910002B17Rik
Mus musculus	Riken	ILMN_207242	ILMN_207242	F730044K23RIK	ri|F730044K23|PL00003H22|AK089517|1901					AK089517	F730044K23Rik		ILMN_1233236	002570209	S	1766	GCACAGGATGGCTAGAGCTAGGGGTCTGTTTGTCCTCCTCAAGGTGTGCC										
Mus musculus	RefSeq	ILMN_205925	ILMN_232558	SFRS15	NM_178923.3	NM_178923.3		224432	109150408	NM_178923.3	Sfrs15	NP_849254.2	ILMN_1221304	000630438	S	4011	GCCTCCTCGCTAGAGACTGGATGTGACAGAATGTGACAGTGACACTTGGG	16	-	90229505-90229542:90229543-90229554	16qC3.3	Mus musculus splicing factor, arginine/serine-rich 15 (Sfrs15), mRNA.				Sra4; AA517739	Sra4; AA517739
Mus musculus	RefSeq	ILMN_232558	ILMN_232558	SFRS15	NM_178923.3	NM_178923.3		224432	109150408	NM_178923.3	Sfrs15	NP_849254.2	ILMN_2786950	006290601	S	696	TTGTCCATCTGAAGATAAGAGTAAAATAGTTCGTGTCCTAAATCTTTGGC	16	-	90259060-90259091:90260386-90260403	16qC3.3	Mus musculus splicing factor, arginine/serine-rich 15 (Sfrs15), mRNA.				Sra4; AA517739	Sra4; AA517739
Mus musculus	MEEBO	ILMN_221715	ILMN_221715	OLFR912	scl37088.1.1_95	XM_146742.1			20884574	XM_146742.1	Olfr912		ILMN_2739404	006480482	S	628	CTAGTATTGTTGTCTTTATTTCTTATGGCTTTATCCTTTCTAATATCCTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_221166	ILMN_249661	VAMP5	NM_001080742.1	NM_001080742.1		53620	124001561	NM_001080742.1	Vamp5	NP_001074211.1	ILMN_1219740	004570332	S	983	CCATCATCTTTGATATCTTGAACATTCTCAGAGGACCAATGGAACTCCAG	6	-	72318548-72318597	6qC1	Mus musculus vesicle-associated membrane protein 5 (Vamp5), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]		Camp; AF119384	Camp; AF119384
Mus musculus	RefSeq	ILMN_194191	ILMN_249661	VAMP5	NM_001080742.1	NM_001080742.1		53620	124001561	NM_001080742.1	Vamp5	NP_001074211.1	ILMN_1232901	001340528	S	111	GCCAGCAGCAGGCGGACGAAGTGACGGAAATCATGCTCAACAATTTCGAC	6	-	72320253-72320302	6qC1	Mus musculus vesicle-associated membrane protein 5 (Vamp5), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]		Camp; AF119384	Camp; AF119384
Mus musculus	RefSeq	ILMN_209483	ILMN_209483	2410014A08RIK	NM_175403.2	NM_175403.2		109154	31341805	NM_175403.2	2410014A08Rik	NP_780612.1	ILMN_1222602	004480474	S	3425	AGAATCACTCCATTGTTCGTGTTGCTTTTTGCACTGTTTGTTCCCCGCTG	5	-	115595437-115595486	5qF	Mus musculus RIKEN cDNA 2410014A08 gene (2410014A08Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA0152; AI850530; ESTM19; X83352	mKIAA0152; AI850530; ESTM19; X83352
Mus musculus	RefSeq	ILMN_209483	ILMN_209483	2410014A08RIK	NM_175403.2	NM_175403.2		109154	31341805	NM_175403.2	2410014A08Rik	NP_780612.1	ILMN_2596230	007570465	S	3439	GTTCGTGTTGCTTTTTGCACTGTTTGTTCCCCGCTGTGTTTTGAGCTAGA	5	-	115595423-115595472	5qF	Mus musculus RIKEN cDNA 2410014A08 gene (2410014A08Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA0152; AI850530; ESTM19; X83352	mKIAA0152; AI850530; ESTM19; X83352
Mus musculus	RefSeq	ILMN_209483	ILMN_209483	2410014A08RIK	NM_175403.2	NM_175403.2		109154	31341805	NM_175403.2	2410014A08Rik	NP_780612.1	ILMN_2997796	000070703	S	3744	AACTCTCTTAAACATTGTGCCAAGAAACGATTTGTGGGATTCATGTCCCG	5	-	115595118-115595167	5qF	Mus musculus RIKEN cDNA 2410014A08 gene (2410014A08Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA0152; AI850530; ESTM19; X83352	mKIAA0152; AI850530; ESTM19; X83352
Mus musculus	RefSeq	ILMN_209483	ILMN_209483	2410014A08RIK	NM_175403.2	NM_175403.2		109154	31341805	NM_175403.2	2410014A08Rik	NP_780612.1	ILMN_2744036	001690204	S	3292	CCCAGCTAATGAGCTGTTTGACGTTGAACTTGAAAGCTTTCCCCTCCCTC	5	-	115595570-115595619	5qF	Mus musculus RIKEN cDNA 2410014A08 gene (2410014A08Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA0152; AI850530; ESTM19; X83352	mKIAA0152; AI850530; ESTM19; X83352
Mus musculus	RefSeq	ILMN_259975	ILMN_259975	NEGR1	NM_001039094.1	NM_001039094.1		320840	84875492	NM_001039094.1	Negr1	NP_001034183.1	ILMN_3115242	002750376	A	1054	GCGCCTACAATTCAGGAAATTAAATCTGGCACTGTGACCCCTGGACGCAG	3	+	157081508-157081557	3qH4	Mus musculus neuronal growth regulator 1 (Negr1), transcript variant 1, mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA3001; 5330422G01Rik; KILON; Ntra	mKIAA3001; 5330422G01Rik; KILON; Ntra
Mus musculus	RefSeq	ILMN_209056	ILMN_248087	LOC675709	XM_984471.1	XM_984471.1		675709	94404739	XM_984471.1	LOC675709	XP_989565.1	ILMN_2592120	004880546	S	1060	CGTACCTCTTTATGGTACAAGCTAGAGGTATCATGCTGAGAGAGAATGTG					PREDICTED: Mus musculus similar to UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase (LOC675709), mRNA.					
Mus musculus	RefSeq	ILMN_191234	ILMN_234797	DAF2	NM_007827.2	NM_007827.2		13137	118026912	NM_007827.2	Daf2	NP_031853.2	ILMN_2644987	003870014	S	1042	CCCAGCATGAACCTGATACCACGACAAGAACATCTACAGACAAAGGAGAG	1	-	132307215-132307264	1qE4	Mus musculus decay accelerating factor 2 (Daf2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		MGC156369; AI323748; TM-DAF; Daf; Daf-TM	MGC156369; AI323748; TM-DAF; Daf; Daf-TM
Mus musculus	RefSeq	ILMN_209185	ILMN_209185	LHFPL1	NM_178358.3	NM_178358.3		237091	34328432	NM_178358.3	Lhfpl1	NP_848135.1	ILMN_2593351	003800767	S	1347	CAAGGGGCACTGGAAGACACACTAAGCTATTTTGCACCCATTCATTTGCA	X	-	141725279-141725328	XqF2	Mus musculus lipoma HMGIC fusion partner-like 1 (Lhfpl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Lhfp	Lhfp
Mus musculus	RefSeq	ILMN_220477	ILMN_220477	SLC13A3	NM_054055.1	NM_054055.1		114644	16905090	NM_054055.1	Slc13a3	NP_473396.1	ILMN_2918312	001850674	S	2813	AGACAGCCTTCCACTAGAGGCTGAAGCCAGGAAGCAGACAGTTGCTGTCC	2	-	165096861-165096910	2qH3	Mus musculus solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 (Slc13a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 15362] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SDCT2; NaDC-3; NaDC3	SDCT2; NaDC-3; NaDC3
Mus musculus	RefSeq	ILMN_221894	ILMN_221894	P2RX5	NM_033321.1	NM_033321.1		94045	15277324	NM_033321.1	P2rx5	NP_201578.1	ILMN_1233283	001740332	S	2209	CTGTCTGACTTCCTTCCTGCTCTCAGAAGCCCAGCCTTGATGTGCTAATG	11	+	72988798-72988847	11qB4	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 5 (P2rx5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IDA]	P2X5	P2X5
Mus musculus	RefSeq	ILMN_221894	ILMN_221894	P2RX5	NM_033321.1	NM_033321.1		94045	15277324	NM_033321.1	P2rx5	NP_201578.1	ILMN_2941315	006330451	S	1955	GCTGTTGGATGACATCCAGGGGACACTTAGCTCCACCCCCAGATGTTAAC	11	+	72988544-72988593	11qB4	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 5 (P2rx5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IDA]	P2X5	P2X5
Mus musculus	RefSeq	ILMN_222603	ILMN_328010	GLB1L3	XM_001476959.1	XM_001476959.1		70893	149259521	XM_001476959.1	Glb1l3	XP_001477009.1	ILMN_2752181	006020162	S	2363	ATATCTCATACTATCCATTTAATTACTATCTTTAGGCTATAAAAATCAAA				9qA4	PREDICTED: Mus musculus galactosidase, beta 1 like 3 (Glb1l3), mRNA.	A multimeric enzyme complex that in E. coli is a heterooctamer made up of four alpha subunits and four beta subunits. Catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides [goid 9341] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]		
Mus musculus	RefSeq	ILMN_234355	ILMN_234355	EG574083	NM_001025353.1	NM_001025353.1		574083	70778874	NM_001025353.1	EG574083	NP_001020524.1	ILMN_3163156	000110719	A	111	CCTGAAGCAGGGGACACCAAACTGTGAGCCTTTCAGAGGACCCTGCAGAG	8	-	22056721-22056770	8qA2	Mus musculus predicted gene, EG574083 (EG574083), mRNA.				Defb51	Defb51
Mus musculus	RefSeq	ILMN_208763	ILMN_208763	IGF2R	NM_010515.1	NM_010515.1		16004	23956053	NM_010515.1	Igf2r	NP_034645.1	ILMN_2931095	004150008	S	8606	GCAGTGTCCCAGATGGAAGGCAGGCCCAGTCCACTGGCTGTGGATTCTTT	17	-	12525995-12526044	17qA1	Mus musculus insulin-like growth factor 2 receptor (Igf2r), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence IDA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IPI]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	Mpr300; CD222; AI661837; CI-MPR; M6P/IGF2R	Mpr300; CD222; AI661837; CI-MPR; M6P/IGF2R
Mus musculus	RefSeq	ILMN_208763	ILMN_208763	IGF2R	NM_010515.1	NM_010515.1		16004	23956053	NM_010515.1	Igf2r	NP_034645.1	ILMN_2931096	000670754	S	8362	AGGCTCTTGGGGAGGAGCTGCGCTTCAGGTTTGAGCTGTAGGTCTCATCT	17	-	12526239-12526288	17qA1	Mus musculus insulin-like growth factor 2 receptor (Igf2r), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence IDA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IPI]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	Mpr300; CD222; AI661837; CI-MPR; M6P/IGF2R	Mpr300; CD222; AI661837; CI-MPR; M6P/IGF2R
Mus musculus	RefSeq	ILMN_220007	ILMN_220007	BMS1	NM_194339.1	NM_194339.1		213895	39930554	NM_194339.1	Bms1	NP_919320.1	ILMN_2716358	004850561	S	3937	GAGGAAGAAGCTCTTCCGGATGCAGGGTCAGAAGGAAAAACGAAGTCAGA	6	-	118333700-118333749	6qF1	Mus musculus BMS1 homolog, ribosome assembly protein (yeast) (Bms1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA408648; BC030906; KIAA0187; mKIAA0187; BB007109; Bms1l; AU020092; AU043373	AA408648; BC030906; KIAA0187; mKIAA0187; BB007109; Bms1l; AU020092; AU043373
Mus musculus	MEEBO	ILMN_186849	ILMN_186849	KRTAP6-3	scl1153.1.1_274						Krtap6-3		ILMN_2439018	000160315	S	5	GCAGGTGGAATGTGTGGAAGCTTGCAGAGGACTTCAGAATCCTTATAATA						A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211163	ILMN_314963	5830454E08RIK	XM_001473897.1	XM_001473897.1		76100	149260352	XM_001473897.1	5830454E08Rik	XP_001473947.1	ILMN_2613175	003400154	S	807	CTCTGGGAGTACCTGAGTTTGTGTGGCGGACATTGACCACATTCATCCAT	9	+	120487122-120487171	9qF4	PREDICTED: Mus musculus RIKEN cDNA 5830454E08 gene (5830454E08Rik), mRNA.					
Mus musculus	Riken	ILMN_203307	ILMN_203307	4933412A06RIK	ri|4933412A06|PX00020O21|AK030177|2427					AK030177	4933412A06Rik		ILMN_2556307	001090161	S	2331	GGGTCTGCTTACCCAGGAGGACAAGAGGAGTCAGGAGAGCTCAGCATGCA										
Mus musculus	RefSeq	ILMN_219935	ILMN_219935	CHCHD5	NM_025395.1	NM_025395.1		66170	28076872	NM_025395.1	Chchd5	NP_079671.1	ILMN_2801540	006840551	S	874	GGCTATGCCCCGCCTACCATTAGTGCCCACAGCCTACATTCACTACACCG	2	+	128825246-128825295	2qF1	Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 5 (Chchd5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110027L01Rik; AW045710	1110027L01Rik; AW045710
Mus musculus	Riken	ILMN_207115	ILMN_207115	C530042P11RIK	ri|C530042P11|PX00669F20|AK083071|2226					AK083071	C530042P11Rik		ILMN_2585154	002450441	S	1819	ATGAGGGGCCTGTAGAAAACGTCCTGTGTTGGTTTTGGGGTAGGGGTCCC										
Mus musculus	RefSeq	ILMN_216494	ILMN_216494	EPAS1	NM_010137.2	NM_010137.2		13819	31982801	NM_010137.2	Epas1	NP_034267.2	ILMN_3129160	005860762	A	2630	GGACCTGTCCTTTGATGCCTGACAAGACCATCAGTGCGAACATGGCCCCC	17	+	87228390-87228439	17qE4	Mus musculus endothelial PAS domain protein 1 (Epas1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IGI]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 43619] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 43619] [evidence IDA]; Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 43619] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process involved in the maintenance of an equilibrium of the surface-active lipoprotein mixture which coats the alveoli [goid 43129] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42415] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	HIF-2alpha; HLF; HRF; MOP2	HIF-2alpha; HLF; HRF; MOP2
Mus musculus	RefSeq	ILMN_216494	ILMN_216494	EPAS1	NM_010137.2	NM_010137.2		13819	31982801	NM_010137.2	Epas1	NP_034267.2	ILMN_3052632	005220035	I	3353	GCATGGTGGCTGGTGCCTCTCCCTAGGAAAGCTTTGGCGTCATTCAACTC	17	+	87230789-87230838	17qE4	Mus musculus endothelial PAS domain protein 1 (Epas1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IGI]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 43619] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 43619] [evidence IDA]; Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 43619] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process involved in the maintenance of an equilibrium of the surface-active lipoprotein mixture which coats the alveoli [goid 43129] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42415] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	HIF-2alpha; HLF; HRF; MOP2	HIF-2alpha; HLF; HRF; MOP2
Mus musculus	RefSeq	ILMN_196620	ILMN_196620	FSTL	XM_147260.1	XM_147260.1			20892468	XM_147260.1	Fstl		ILMN_2525049	002510082	S	181	TGGAGCTGGCAGGGAATGTGCCGTCACAGAGAAGGGGGAGCCCACGTGCC										
Mus musculus	MEEBO	ILMN_194129	ILMN_194129	ADARB2	scl45091.11_423				31542105	NM_052977	Adarb2		ILMN_1252660	003710431	S	4062	CCATGTTTAGAATATGGGAGTCTTGATTAGAATTCTAGTGCATCATCCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213328	ILMN_213328	ADCK4	scl076889.12_92	NM_133770.1			19526989	NM_133770.1	Adck4		ILMN_1214631	003140753	S	1441	TTGGATCTTTGGGCCCCTGGAGTTAGCTCCCTGATCCTAAGTGAGCAACC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	Riken	ILMN_204684	ILMN_204684	GDAP1	ri|A230085L09|PX00130G13|AK039016|3684					AK039016	Gdap1		ILMN_1237468	004010309	S	2685	GTCTCAGACTGCAAATGGGAGCTGTAGTCTGTCTGTATCATGCTTGCCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Mus musculus	RefSeq	ILMN_184859	ILMN_228301	UBA6	NM_172712.2	NM_172712.2		231380	40254245	NM_172712.2	Uba6	NP_766300.1	ILMN_1257331	002760678	S	4751	CTGTAGGTAATCATTCAGGAATCCTCAAACATGAAGCAATAGCTTGGCTC	5	-	86540041-86540090	5qE1	Mus musculus ubiquitin-like modifier activating enzyme 6 (Uba6), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5730469D23Rik; AW124799; 4930542H01; AU021846	5730469D23Rik; AW124799; 4930542H01; AU021846
Mus musculus	MEEBO	ILMN_195830	ILMN_195830	SCL0004166.1_8	scl0004166.1_8						scl0004166.1_8		ILMN_2519122	005900402	S	6	CAAGGTTTACTCAAGCCTGCCCTCTCCTCTCAAGCTTGACCAGAAACAGC										
Mus musculus	RefSeq	ILMN_192972	ILMN_236833	ZFYVE26	NM_001008550.1	NM_001008550.1		211978	112818583	NM_001008550.1	Zfyve26	NP_001008550.1	ILMN_2493052	005550050	S	9117	CACTTTACACAACTGGGTTGGAAGTCTTGCAGCCCTCGATTTAGGATGTC	12	-	80333535-80333584	12qC3	Mus musculus zinc finger, FYVE domain containing 26 (Zfyve26), mRNA. XM_919000 XM_919020 XM_919029 XM_919036 XM_919042 XM_986993 XM_990500 XM_990526 XM_990571 XM_990599 XM_990628	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA0321; Gm893; mKIAA0321; A630028O16Rik; 4930465A13; 9330197E15Rik	KIAA0321; Gm893; mKIAA0321; A630028O16Rik; 4930465A13; 9330197E15Rik
Mus musculus	RefSeq	ILMN_219727	ILMN_219727	SEC61A1	NM_016906.4	NM_016906.4		53421	146134405	NM_016906.4	Sec61a1	NP_058602.1	ILMN_3162476	005290600	S	2768	ACAGAGCAGCTTCCCACCTACCCTAGGGACTCCACAGCTTCTGGCAAGCA				6qD1	Mus musculus Sec61 alpha 1 subunit (S. cerevisiae) (Sec61a1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]; Interacting selectively with any part of a ribosome [goid 43022] [evidence IDA]	AA408394; Sec61a; AA410007	AA408394; Sec61a; AA410007
Mus musculus	Riken	ILMN_205371	ILMN_205371	D130008K01RIK	ri|D130008K01|PX00182M16|AK051165|1809					AK051165	D130008K01Rik		ILMN_1249849	003290450	S	1503	ACCTGACGGTGCTGAGGATTTTCACAAAACAGCCATCACGACCATTGTTC										
Mus musculus	RefSeq	ILMN_211380	ILMN_234518	PPP2R1B	NM_001034085.1	NM_001034085.1		73699	77539769	NM_001034085.1	Ppp2r1b	NP_001029257.1	ILMN_2615232	005260010	S	2365	GGCAGCTTTGTAATACTGACGTGTCTGCCTGTCGGTTCACATCAGCAGTG	9	+	50701063-50701112	9qA5.3	Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform (Ppp2r1b), transcript variant 1, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI790395; 2410091N08Rik	AI790395; 2410091N08Rik
Mus musculus	RefSeq	ILMN_186772	ILMN_234518	PPP2R1B	NM_001034085.1	NM_001034085.1		73699	77539769	NM_001034085.1	Ppp2r1b	NP_001029257.1	ILMN_2438376	004890064	S	2066	CCAGCATGTCAGTTGCATATAAATACTAGAGACACACTTGCCCAACTGGA	9	+	50700764-50700813	9qA5.3	Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform (Ppp2r1b), transcript variant 1, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI790395; 2410091N08Rik	AI790395; 2410091N08Rik
Mus musculus	RefSeq	ILMN_200042	ILMN_200042	LOC384175	XM_357467.1	XM_357467.1			38079991	XM_357467.1	LOC384175		ILMN_1244690	001710195	S	367	GTGGAGAGGCAGAACCTGAAGCTTGGTCAGGAGGGAGATGAGAAATGGGC										
Mus musculus	RefSeq	ILMN_200559	ILMN_253999	CRIM2	NM_001029985.3	NM_001029985.3		333088	148277587	NM_001029985.3	Crim2	NP_001025156.2	ILMN_1221929	005690309	S	923	CACCTGTTGCCCGGTGTGTGACGGCTGTTTCCTAAATGGGCGGGAGCACA				6qA3.3	Mus musculus cysteine rich BMP regulator 2 (chordin like) (Crim2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity [goid 30513] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KCP; AW060220; Gm793	KCP; AW060220; Gm793
Mus musculus	RefSeq	ILMN_208679	ILMN_208679	MAT2B	NM_134017.1	NM_134017.1		108645	19527233	NM_134017.1	Mat2b	NP_598778.1	ILMN_2588505	004920066	S	1690	TATCTTACTAAGTGATGTTTCATACATGTGGTTATAATAATGAGCCTTGT	11	-	40492864-40492913	11qA5	Mus musculus methionine adenosyltransferase II, beta (Mat2b), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of polysaccharides used in extracellular structures [goid 45226] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH + H+ [goid 8831] [evidence IEA]	1110064C04Rik; TGR; MAT-II; AU022853; 2410018D16Rik; RP23-382C18.2; AI182287; MATIIbeta	1110064C04Rik; TGR; MAT-II; AU022853; 2410018D16Rik; RP23-382C18.2; AI182287; MATIIbeta
Mus musculus	RefSeq	ILMN_208679	ILMN_208679	MAT2B	NM_134017.1	NM_134017.1		108645	19527233	NM_134017.1	Mat2b	NP_598778.1	ILMN_1248381	003940133	S	18	AGTGCTGCGCTAGTGGAGCTTGCGGTCGCGACTGAAGCGGCGCAAAGACT	11	-	40506048-40506097	11qA5	Mus musculus methionine adenosyltransferase II, beta (Mat2b), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of polysaccharides used in extracellular structures [goid 45226] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH + H+ [goid 8831] [evidence IEA]	1110064C04Rik; TGR; MAT-II; AU022853; 2410018D16Rik; RP23-382C18.2; AI182287; MATIIbeta	1110064C04Rik; TGR; MAT-II; AU022853; 2410018D16Rik; RP23-382C18.2; AI182287; MATIIbeta
Mus musculus	RefSeq	ILMN_208679	ILMN_208679	MAT2B	NM_134017.1	NM_134017.1		108645	19527233	NM_134017.1	Mat2b	NP_598778.1	ILMN_2959037	004040594	S	1190	GGTAAACAATGCTGTTGCACTAGGGGAATGTTGGACCGGCTGAGAGCGGT	11	-	40493364-40493413	11qA5	Mus musculus methionine adenosyltransferase II, beta (Mat2b), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of polysaccharides used in extracellular structures [goid 45226] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH + H+ [goid 8831] [evidence IEA]	1110064C04Rik; TGR; MAT-II; AU022853; 2410018D16Rik; RP23-382C18.2; AI182287; MATIIbeta	1110064C04Rik; TGR; MAT-II; AU022853; 2410018D16Rik; RP23-382C18.2; AI182287; MATIIbeta
Mus musculus	RefSeq	ILMN_255972	ILMN_255972	LOC622665	NM_001037916.1	NM_001037916.1		622665	85702301	NM_001037916.1	LOC622665	NP_001033005.1	ILMN_2841917	004200564	S	1577	GGCAGAGATCAACCCAGCAAATGCCCATGAATACCAGTACCCACCAATGG	4	+	116097553-116097599:116097819-116097821	4qD1	Mus musculus hypothetical protein LOC622665 (LOC622665), mRNA.				FLJ33084	FLJ33084
Mus musculus	Riken	ILMN_202401	ILMN_202401	4930563F16RIK	ri|4930563F16|PX00035N01|AK016205|1484					AK016205	4930563F16Rik		ILMN_1214173	002600037	S	1233	GGTCAGTTGATGTTGCTTAGTGTCCCCAGAGGTCTGTGGTGTGGAGGGAG										
Mus musculus	RefSeq	ILMN_220855	ILMN_220855	SLC24A3	NM_053195.2	NM_053195.2		94249	118131150	NM_053195.2	Slc24a3	NP_444425.1	ILMN_2838501	004280131	S	3366	TCATCCATTCGGTATGGTTTTCCCAGTCCCTTGTACACATCCTGGTTTGA	2	+	145467619-145467668	2qG1	Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 (Slc24a3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence TAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + K+(in) + Na+(out) = Ca2+(out) + K+(out) + Na+(in) [goid 8273] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + K+(in) + Na+(out) = Ca2+(out) + K+(out) + Na+(in) [goid 8273] [evidence ISS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	NCKX3	NCKX3
Mus musculus	RefSeq	ILMN_216870	ILMN_318343	LOC100047717	XM_001478732.1	XM_001478732.1		100047717	149257384	XM_001478732.1	LOC100047717	XP_001478782.1	ILMN_2691309	002370132	S	424	CGCAAAGATCTGCTGGCTCGGAACCTCAACCGCATGCAGAAGCTCTACCC					PREDICTED: Mus musculus hypothetical protein LOC100047717 (LOC100047717), mRNA.					
Mus musculus	RefSeq	ILMN_212815	ILMN_212815	TGM6	NM_177726.3	NM_177726.3		241636	133893375	NM_177726.3	Tgm6	NP_808394.1	ILMN_1245910	004830131	S	2922	GCCTGGAATCAGGACCAGAGTAGACACAACAAGGCCATGAAGAATATGCC	2	+	129979573-129979622	2qF1	Mus musculus transglutaminase 6 (Tgm6), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IEA]	TGY; A030011P16; TGM3L	TGY; A030011P16; TGM3L
Mus musculus	RefSeq	ILMN_197662	ILMN_197662	LOC328615	XM_286696.1	XM_286696.1			28486840	XM_286696.1	LOC328615		ILMN_1219481	004760296	S	422	ACCCTTCTAACTGAGCAGCCAACGAGCTGCCCTCTACCTATTCAGGACAG										
Mus musculus	RefSeq	ILMN_205995	ILMN_259228	PTPN3	NM_011207.1	NM_011207.1		545622	114326174	NM_011207.1	Ptpn3	NP_035337.1	ILMN_1242945	000110368	S	344	CAAACCCCTCAGGAAGCAGCTGAAAGGAGGTTTTCCCTGTACCCTGCATT	4	-	57275355-57275379:57277738-57277762	4qB3	Mus musculus protein tyrosine phosphatase, non-receptor type 3 (Ptpn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PTPCL; 9530011I20Rik; PTP-H1	PTPCL; 9530011I20Rik; PTP-H1
Mus musculus	RefSeq	ILMN_259228	ILMN_259228	PTPN3	NM_011207.1	NM_011207.1		545622	114326174	NM_011207.1	Ptpn3	NP_035337.1	ILMN_2885922	002350142	S	712	CTCGAACCCTTGACTTCTACGGAGTGGAGCTTCATGGAGGCAGAGATCTG	4	-	57257929-57257935:57261530-57261572	4qB3	Mus musculus protein tyrosine phosphatase, non-receptor type 3 (Ptpn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PTPCL; 9530011I20Rik; PTP-H1	PTPCL; 9530011I20Rik; PTP-H1
Mus musculus	RefSeq	ILMN_190232	ILMN_232014	GLYAT	NM_145935.3	NM_145935.3		107146	141802788	NM_145935.3	Glyat	NP_666047.1	ILMN_2697749	001690358	S	1223	GCTGGTGTTGAGTGGGCCCAGGGATGTAACTGGTGGTGGACAAAGAGTGA	19	+	12726140-12726189	19qA	Mus musculus glycine-N-acyltransferase (Glyat), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine [goid 47961] [evidence IEA]	AI315345; ACGNAT; CAT; A330009E03Rik; GAT; AI195249	AI315345; ACGNAT; CAT; A330009E03Rik; GAT; AI195249
Mus musculus	Riken	ILMN_205213	ILMN_205213	E130306F01RIK	ri|E130306F01|PX00208C02|AK053743|1967					AK053743	E130306F01Rik		ILMN_1219278	000130195	S	576	AGTTACCAAGGCGGAAGTGAGTGCACGTGGAGGACTGGATTGCTTCGGAG										
Mus musculus	RefSeq	ILMN_223012	ILMN_223012	OLFR272	NM_146839.1	NM_146839.1		258836	22129180	NM_146839.1	Olfr272	NP_667050.1	ILMN_2758092	001500600	S	777	CGCAAAGCCCAAGTCTAAAGACACCGCTGGGGCAGGCCATCAAAGCGTGA	4	-	52923838-52923887	4qB2	Mus musculus olfactory receptor 272 (Olfr272), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC157594; MOR262-7	MGC157594; MOR262-7
Mus musculus	RefSeq	ILMN_223343	ILMN_223343	BRS3	NM_009766.3	NM_009766.3		12209	142388449	NM_009766.3	Brs3	NP_033896.2	ILMN_1225682	004560274	S	2580	GGCTTGTGCTGTTGTGAACTTCTAATTATGTGGCTCAAAAGGGGCGGGGC	X	+	54301743-54301792	XqA5	Mus musculus bombesin-like receptor 3 (Brs3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with bombesin to initiate a change in cell activity [goid 4946] [evidence IEA]	BRS-3; MGC129147; MGC129146	BRS-3; MGC129147; MGC129146
Mus musculus	Riken	ILMN_202689	ILMN_202689	NUBP1	ri|A930019G03|PX00066L01|AK020876|682					AK020876	Nubp1		ILMN_1229183	000540019	S	517	TTGGGGAGGCTGTGGGTGCCTGATGGGCTTGGTGGTGTGTTCATGCTCTT								Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192350	ILMN_248050	TUBA8	NM_017379.1	NM_017379.1		53857	8394492	NM_017379.1	Tuba8	NP_059075.1	ILMN_1221298	001500301	S	1291	TGGAGAGGGTATGGAAGAAGGAGAGTTTTCTGAGGCCAGGGAGGACCTGG	6	+	121175974-121176023	6qF1	Mus musculus tubulin, alpha 8 (Tuba8), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence ISA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence ISA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence ISA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220945	ILMN_251125	4932443I19RIK	XM_980156.1	XM_980156.1		403185	94384587	XM_980156.1	4932443I19Rik	XP_985250.1	ILMN_1218088	004490220	S	2994	GAGAGCCTGAACGTTTTGTTTCAAACCTTGGTTAATTACAGAGCATTAGC				8qA1.1	PREDICTED: Mus musculus RIKEN cDNA 4932443I19 gene, transcript variant 2 (4932443I19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199422	ILMN_199422	OLFR1475	NM_146301.1	NM_146301.1		258298	22129686	NM_146301.1	Olfr1475	NP_666413.1	ILMN_1254756	005810136	S	750	TGGGTCAACCTTGTTCATGTATTTACAGCCCAGTTCTAATCATTCCATGG	19	-	13553887-13553936	19qA	Mus musculus olfactory receptor 1475 (Olfr1475), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-36	MOR202-36
Mus musculus	RefSeq	ILMN_220636	ILMN_199422	OLFR1475	NM_146301.1	NM_146301.1		258298	22129686	NM_146301.1	Olfr1475	NP_666413.1	ILMN_1226176	007100066	S	565	GATACCTACACAAATGAGATTACAGTCCTTATCTTGGGTACTTGTGATGG	19	-	13554072-13554121	19qA	Mus musculus olfactory receptor 1475 (Olfr1475), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-36	MOR202-36
Mus musculus	RefSeq	ILMN_199422	ILMN_199422	OLFR1475	NM_146301.1	NM_146301.1		258298	22129686	NM_146301.1	Olfr1475	NP_666413.1	ILMN_2535160	000240243	S	675	AATGCGTTCAGCTGAAGCACAGAGGAAGGCATTCTCTACCTGTGCATCTC	19	-	13553962-13554011	19qA	Mus musculus olfactory receptor 1475 (Olfr1475), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-36	MOR202-36
Mus musculus	RefSeq	ILMN_222687	ILMN_222687	ZFP280C	NM_153532.2	NM_153532.2		208968	40254196	NM_153532.2	Zfp280c	NP_705760.2	ILMN_1252459	002120112	S	3985	ATGTTCTCTCTATCTTGGGACTATCATAACATCTTAGTGGTCAGGAAATG	X	-	45895122-45895171	XqA4	Mus musculus zinc finger protein 280c (Zfp280c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC38010; Zfp633; BC028839; mKIAA1584	MGC38010; Zfp633; BC028839; mKIAA1584
Mus musculus	Riken	ILMN_206029	ILMN_206029	C230093F19RIK	ri|C230093F19|PX00177O02|AK049030|663					AK049030	C230093F19Rik		ILMN_1255988	004250017	S	566	TGCCAGTGAGAAAAATCCCGAGTCCGTGTCCCCGATGTACAGACCCAGGC										
Mus musculus	RefSeq	ILMN_200652	ILMN_200652	LOC383431	XM_357048.1	XM_357048.1			38084893	XM_357048.1	LOC383431		ILMN_1227362	000990035	S	278	TGCCTCTCGCGCCCAAATGCCCACACACCCAGGTTCCCAATGACAGCTCT										
Mus musculus	MEEBO	ILMN_219428	ILMN_219428	6230405M12RIK	scl0330336.2_298	NM_183310.1			34303982	NM_183310.1	6230405M12Rik		ILMN_2708756	000520730	S	2145	CTTTCTAAATGCTGAAAAAGATGCTTATGTATCCAGAGATAGTGTCTGCT										
Mus musculus	RefSeq	ILMN_213955	ILMN_213955	DNPEP	NM_016878.3	NM_016878.3		13437	142378273	NM_016878.3	Dnpep	NP_058574.2	ILMN_2642704	002060440	S	1926	CGCACCTGAACCAGAAGCCCCTGTTCACAAGGGACTTGACACCACTTGTC	1	-	75304983-75305032	1qC3-qC4	Mus musculus aspartyl aminopeptidase (Dnpep), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol [goid 5773] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	AA407814	AA407814
Mus musculus	RefSeq	ILMN_212495	ILMN_212495	CDK2AP2	NM_026373.3	NM_026373.3		52004	146134941	NM_026373.3	Cdk2ap2	NP_080649.1	ILMN_2627093	004180270	S	502	GCAGAGCGCCTGCTTCTCCCTGGCCTTCGCGCCCCAAGTTGCTTCCTATC				19qA	Mus musculus CDK2-associated protein 2 (Cdk2ap2), mRNA.				5830466O21Rik; Doc-1r; D19Ertd144e	5830466O21Rik; Doc-1r; D19Ertd144e
Mus musculus	RefSeq	ILMN_229354	ILMN_229354	ZFP780B	NM_001081021.1	NM_001081021.1		338354	124486617	NM_001081021.1	Zfp780b	NP_001074490.1	ILMN_2993814	007330368	S	956	GGAATGTGGGAAGTCCTTCAACCGTGTCTCCAACCTTGTTGCACATAGGA	7	-	28749324-28749373	7qA3	Mus musculus zinc finger protein 780B (Zfp780b), mRNA. XM_897644 XM_897665 XM_897681 XM_897695 XM_897706 XM_897718 XM_897728 XM_897739 XM_897749 XM_897756 XM_897763 XM_897774 XM_897782 XM_897792 XM_912452 XM_922361 XM_922366 XM_922376 XM_922384 XM_922391 XM_922395 XM_922399 XM_922406 XM_922409 XM_922416 XM_922422 XM_922429 XM_922434 XM_922440 XM_922443 XM_922449 XM_922454 XM_922458				B230208L21Rik; MGC106695	B230208L21Rik; MGC106695
Mus musculus	RefSeq	ILMN_194003	ILMN_323937	CYP2D13	NR_003552.1	NR_003552.1		68444	148277062	NR_003552.1	Cyp2d13		ILMN_1253563	000610333	S	1571	CGTTAGCAGGCAACAAATCCTAGTCCAGAAACTAGCTTAGAGTCACACGC				15qE1	Mus musculus cytochrome P450, family 2, subfamily d, polypeptide 13 (Cyp2d13), non-coding RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	1300007K12Rik	1300007K12Rik
Mus musculus	Riken	ILMN_203520	ILMN_203520	5830496L11RIK	ri|5830496L11|PX00041K19|AK031022|4710					AK031022	5830496L11Rik		ILMN_1236507	003190722	S	4355	TAGGCAGAATCCCACTAAAGGATGGCAGGACTCTCCAGCAGCATCCAACC										
Mus musculus	MEEBO	ILMN_213139	ILMN_213139	RACGAP1	scl46734.18.1_53	XM_122906.1			20903476	XM_122906.1	Racgap1		ILMN_2634078	001990392	S	2176	ATCTTTACCAGGGCCGAAGGGGAAATGGGTATAAGTTGGGGCTCTTAGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [pmid 10493933] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_203464	ILMN_203464	4832420L08RIK	ri|4832420L08|PX00102P20|AK029315|2950					AK029315	4832420L08Rik		ILMN_1238535	006590446	S	2579	GATTCTCGCAGTATGGCCTCTAGTGGCAGGCTCAAAATGTCCTCAGTGGG										
Mus musculus	RefSeq	ILMN_197019	ILMN_197019	LOC381305	XM_355250.1	XM_355250.1			38073534	XM_355250.1	LOC381305		ILMN_1215909	001470102	S	1793	CTCGAGGAAGTGCCCCAGCTTTTGAGACAGCACCTTACCAGCAGGGTACT										
Mus musculus	RefSeq	ILMN_196592	ILMN_196592	GSTA1	NM_008181.1	NM_008181.1			7110610	NM_008181.1	Gsta1		ILMN_2657636	000070544	S	399	CCTGCCTTTGAAAAGGTGTTGAAGAGCCATGGCCAAGACTACCTTGTGGG							The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence ISA]		
Mus musculus	RefSeq	ILMN_196910	ILMN_196910	LOC271697	XM_194683.2	XM_194683.2			38049519	XM_194683.2	LOC271697		ILMN_2526226	002650044	S	1052	CCACTGAGTACTCCTCTGAGCTAGACATATGGGGCGCAGGCTGCATCTTC										
Mus musculus	RefSeq	ILMN_194218	ILMN_248846	EG330070	XM_897537.2	XM_897537.2		330070	94374698	XM_897537.2	EG330070	XP_902630.1	ILMN_2504447	000730168	S	2718	CTTGCCTGGGCGAGCTTACCAGCGTGTTGGTGTTCTGTGGTGCCTTTGCA	5	+	37556805-37556854	5qB3	PREDICTED: Mus musculus predicted gene, EG330070 (EG330070), mRNA.					
Mus musculus	RefSeq	ILMN_234090	ILMN_234090	LOC654467	NR_002885.1	NR_002885.1		654467	85060512	NR_002885.1	LOC654467		ILMN_2933624	004150209	S	962	GGCCAGTACTTTGCTAAACCACGGAACCCAAGGTGGCTATGGCGGTTCCA					Mus musculus heterogeneous nuclear ribonucleoprotein A1 pseudogene (LOC654467) on chromosome 9.					
Mus musculus	RefSeq	ILMN_186551	ILMN_186551	VAPB	NM_019806.5	NM_019806.5		56491	86476057	NM_019806.5	Vapb	NP_062780.2	ILMN_2436489	001940343	S	1680	CCCTGAGGAGGAACGCTCTTTTTAATGACAGTCAGCTCTGGATTACCCAG	2	+	173604548-173604597	2qH4	Mus musculus vesicle-associated membrane protein, associated protein B and C (Vapb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	D2Abb2e; R75548; AI848259; VAP33b; AI840687; AI225786; Vamp33b	D2Abb2e; R75548; AI848259; VAP33b; AI840687; AI225786; Vamp33b
Mus musculus	RefSeq	ILMN_186551	ILMN_186551	VAPB	NM_019806.5	NM_019806.5		56491	86476057	NM_019806.5	Vapb	NP_062780.2	ILMN_2506144	005690402	S	574	CGGCAGCCGCAAAGTCCCTGACATCGCCCCTCGATGACACAGAAGTAAAG	2	+	173601668-173601717	2qH4	Mus musculus vesicle-associated membrane protein, associated protein B and C (Vapb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	D2Abb2e; R75548; AI848259; VAP33b; AI840687; AI225786; Vamp33b	D2Abb2e; R75548; AI848259; VAP33b; AI840687; AI225786; Vamp33b
Mus musculus	RefSeq	ILMN_205170	ILMN_186551	VAPB	NM_019806.5	NM_019806.5		56491	86476057	NM_019806.5	Vapb	NP_062780.2	ILMN_1236042	004540332	S	6718	CAGAGCACGGAGGGACTCTGTCGTGGTGCACGTTGGTTGTCTGATGTGTG	2	+	173609586-173609635	2qH4	Mus musculus vesicle-associated membrane protein, associated protein B and C (Vapb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	D2Abb2e; R75548; AI848259; VAP33b; AI840687; AI225786; Vamp33b	D2Abb2e; R75548; AI848259; VAP33b; AI840687; AI225786; Vamp33b
Mus musculus	RefSeq	ILMN_243995	ILMN_243995	OLFM4	NM_001030294.1	NM_001030294.1		380924	71892419	NM_001030294.1	Olfm4	NP_001025465.1	ILMN_3161834	002450647	S	1332	GACACCACTCTTGAGGTGATAAGCACTTGGGTTACCAAGCAGTACAAGCC	14	+	80421429-80421478	14qD3	Mus musculus olfactomedin 4 (Olfm4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	GW112; pPD4; OlfD; Gm296; GC1; Gm913	GW112; pPD4; OlfD; Gm296; GC1; Gm913
Mus musculus	RefSeq	ILMN_206617	ILMN_253301	CAMK1D	NM_177343.3	NM_177343.3		227541	79750128	NM_177343.3	Camk1d	NP_796317.2	ILMN_1224844	000620521	S	5408	CTGTATGTACTCCACTGCTCTGTAGGGGGTTTCCTGGTCCTAGGGTGGGG	2	-	5216156-5216205	2qA1	Mus musculus calcium/calmodulin-dependent protein kinase ID (Camk1d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence ISO]	A630059D12Rik; E030025C11Rik; CKLiK; CaMKIdelta	A630059D12Rik; E030025C11Rik; CKLiK; CaMKIdelta
Mus musculus	RefSeq	ILMN_184543	ILMN_253301	CAMK1D	NM_177343.3	NM_177343.3		227541	79750128	NM_177343.3	Camk1d	NP_796317.2	ILMN_1220441	000770079	S	3487	GCTTGGTTCAACCTTGACACATCAGGTCTCCATGTACTTGTATAAGGCAG	2	-	5218077-5218126	2qA1	Mus musculus calcium/calmodulin-dependent protein kinase ID (Camk1d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence ISO]	A630059D12Rik; E030025C11Rik; CKLiK; CaMKIdelta	A630059D12Rik; E030025C11Rik; CKLiK; CaMKIdelta
Mus musculus	RefSeq	ILMN_184543	ILMN_253301	CAMK1D	NM_177343.3	NM_177343.3		227541	79750128	NM_177343.3	Camk1d	NP_796317.2	ILMN_1255112	002810471	S	244	GCGGCAGCAGCCAAGGCGAAAGAGGAAACTGCCGAAGAGGAAGCTCTGCG	2	-	5635417-5635466	2qA1	Mus musculus calcium/calmodulin-dependent protein kinase ID (Camk1d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence ISO]	A630059D12Rik; E030025C11Rik; CKLiK; CaMKIdelta	A630059D12Rik; E030025C11Rik; CKLiK; CaMKIdelta
Mus musculus	RefSeq	ILMN_213818	ILMN_213818	DPAGT1	NM_007875.2	NM_007875.2		13478	31982408	NM_007875.2	Dpagt1	NP_031901.2	ILMN_2641111	005340593	S	1832	GTTGTGATTGGGAAGCGTAGAGGCAGGGCCATGTGCTCAGAACGGTGACA	9	+	44141610-44141659	9qA5.2	Mus musculus dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase) (Dpagt1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence TAS]	The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P [goid 6488] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine + undecaprenyl phosphate = UMP + N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine-diphosphoundecaprenol [goid 8963] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + dolichyl phosphate = UMP + N-acetyl-D-glucosaminyl-diphosphodolichol [goid 3975] [evidence IDA]	AU021132; Dpagt2	AU021132; Dpagt2
Mus musculus	RefSeq	ILMN_219842	ILMN_219842	ODC1	NM_013614.1	NM_013614.1		18263	7305336	NM_013614.1	Odc1	NP_038642.1	ILMN_3008406	006840121	S	2324	CACTTTTCAGACATTGATACTAACGTGTGCCCCTCAGCTGCTGAGCAAGC				12qA1.1	Mus musculus ornithine decarboxylase, structural 1 (Odc1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups [goid 6596] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: L-ornithine = putrescine + CO2 [goid 4586] [evidence IDA]	ODC; MGC103389	ODC; MGC103389
Mus musculus	RefSeq	ILMN_218480	ILMN_218480	STK22S1	NM_011651.2	NM_011651.2		22116	117938288	NM_011651.2	Stk22s1	NP_035781.2	ILMN_1235441	007040246	S	1763	GGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTC	7	+	52213343-52213382:52213383-52213392	7qB4	Mus musculus serine/threonine kinase 22 substrate 1 (Stk22s1), transcript variant 1, mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC148222; Tssks1	MGC148222; Tssks1
Mus musculus	RefSeq	ILMN_209038	ILMN_209038	MLLT11	NM_019914.2	NM_019914.2		56772	31560362	NM_019914.2	Mllt11	NP_064298.1	ILMN_2988212	006040270	S	1615	GGGCATTGGGTCCCATTACAAGTGAGCCAACATGTGGTTGGTGGGGATTG	3	-	95304301-95304350	3qF2.1	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 (Mllt11), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Zfp692; AI839562; Af1q	Zfp692; AI839562; Af1q
Mus musculus	RefSeq	ILMN_215121	ILMN_215121	CAR4	NM_007607.1	NM_007607.1		12351	6671677	NM_007607.1	Car4	NP_031633.1	ILMN_2655795	001500286	S	709	GTGATGAGACTGTCATCTGGACTGTGTACAAACAACCCATCAAGATCCAC	11	+	84778320-84778369	11qC	Mus musculus carbonic anhydrase 4 (Car4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	AW456718	AW456718
Mus musculus	RefSeq	ILMN_208696	ILMN_208696	DERL2	NM_033562.3	NM_033562.3		116891	118130773	NM_033562.3	Derl2	NP_291040.1	ILMN_2685125	006760370	S	959	TAACCTCTTGGAGCCAAAAACTGGAGACCCAGGCACCCTGCCTGTGCCGT	11	-	70823561-70823610	11qB4	Mus musculus Der1-like domain family, member 2 (Derl2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Derlin-2; Flana; RP23-83I13.8; CGI-101; F-lana; MGC11613; BC005682	Derlin-2; Flana; RP23-83I13.8; CGI-101; F-lana; MGC11613; BC005682
Mus musculus	RefSeq	ILMN_208696	ILMN_208696	DERL2	NM_033562.3	NM_033562.3		116891	118130773	NM_033562.3	Derl2	NP_291040.1	ILMN_1241323	003800097	S	3350	CAAGACCTTGACACTAAACTCTTAAAACTAAGGCCTATTTCACTGTCTTC	11	-	70821170-70821219	11qB4	Mus musculus Der1-like domain family, member 2 (Derl2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Derlin-2; Flana; RP23-83I13.8; CGI-101; F-lana; MGC11613; BC005682	Derlin-2; Flana; RP23-83I13.8; CGI-101; F-lana; MGC11613; BC005682
Mus musculus	RefSeq	ILMN_222326	ILMN_228315	EG622236	XM_917756.3	XM_917756.3		622236	149241417	XM_917756.3	EG622236	XP_922849.1	ILMN_2748070	000430470	S	321	CCCCTTGGACAAGACTGTTGTCAACAAGGATGTGTTCAGGGACCCAGCTT				1qH3	PREDICTED: Mus musculus predicted gene, EG622236, transcript variant 1 (EG622236), mRNA.					
Mus musculus	RefSeq	ILMN_185342	ILMN_322016	LOC100045522	XM_001474445.1	XM_001474445.1		100045522	149262662	XM_001474445.1	LOC100045522	XP_001474495.1	ILMN_2426249	004210605	S	4432	TTGCAGTGCATCGGACAGATGGCACTGGTGGGTGTTAGCCGCTTCCAGTG					PREDICTED: Mus musculus similar to SMAD specific E3 ubiquitin protein ligase 2 (LOC100045522), mRNA.					
Mus musculus	RefSeq	ILMN_237340	ILMN_322016	LOC100045522	XM_001474445.1	XM_001474445.1		100045522	149262662	XM_001474445.1	LOC100045522	XP_001474495.1	ILMN_3163529	004730014	A	2017	AAGAGAGACGAGCACGGTTGCTCCAGTTTGTGACAGGGTCCTCTCGAGTG					PREDICTED: Mus musculus similar to SMAD specific E3 ubiquitin protein ligase 2 (LOC100045522), mRNA.					
Mus musculus	RefSeq	ILMN_185342	ILMN_322016	LOC100045522	XM_001474445.1	XM_001474445.1		100045522	149262662	XM_001474445.1	LOC100045522	XP_001474495.1	ILMN_2524801	000060523	S	2496	CCTTGAACCTAAAGAATGCTGACCCCCTGCGTCTCCAGAGTTAGGCAGTA					PREDICTED: Mus musculus similar to SMAD specific E3 ubiquitin protein ligase 2 (LOC100045522), mRNA.					
Mus musculus	RefSeq	ILMN_197185	ILMN_197185	LOC218206	XM_127329.2	XM_127329.2			38074502	XM_127329.2	LOC218206		ILMN_2527220	007650634	S	41	GAAAGCCCTTGCACTAGGAGAGTAAAGTTCTCACACCTGGCTTCTAAGAC										
Mus musculus	RefSeq	ILMN_204148	ILMN_227258	WDR18	NM_175450.4	NM_175450.4		216156	141801725	NM_175450.4	Wdr18	NP_780659.2	ILMN_2562742	005550689	S	1024	ACTTCAACAAGCACCTGCTGGGGGCTGAGCATGGAGATGAAGCCCAGGGT	10	+	79429386-79429435	10qC1	Mus musculus WD repeat domain 18 (Wdr18), mRNA. XM_914259 XM_923132 XM_923137 XM_923141 XM_923147	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC106215; AW122032; AU044733; 2310012I10Rik	MGC106215; AW122032; AU044733; 2310012I10Rik
Mus musculus	RefSeq	ILMN_189568	ILMN_227258	WDR18	NM_175450.4	NM_175450.4		216156	141801725	NM_175450.4	Wdr18	NP_780659.2	ILMN_2462431	007200360	S	2526	CCCACTCCCCAAAAAGGCCTTGCATGAATTTCCTGTCATTCAGCTGGAGT	10	+	79431563-79431612	10qC1	Mus musculus WD repeat domain 18 (Wdr18), mRNA. XM_914259 XM_923132 XM_923137 XM_923141 XM_923147	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC106215; AW122032; AU044733; 2310012I10Rik	MGC106215; AW122032; AU044733; 2310012I10Rik
Mus musculus	RefSeq	ILMN_220586	ILMN_220586	PCDHB1	NM_053126.1	NM_053126.1		93872	16716424	NM_053126.1	Pcdhb1	NP_444356.1	ILMN_2724088	004010709	S	2347	GCCACTGGAGAGGTGAAAACAGAGGATGACTCCAGTTTGCCTCCAGGTTC	18	+	37426998-37427047	18qB3	Mus musculus protocadherin beta 1 (Pcdhb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbA	PcdhbA
Mus musculus	RefSeq	ILMN_189538	ILMN_242038	GPRIN3	NM_183183.2	NM_183183.2		243385	142351364	NM_183183.2	Gprin3	NP_899006.1	ILMN_2722319	003170327	S	2426	GTAAGAAGCTTAAAGGGAGACAACATGGTGTTCTGCAGTCCATGCTGCAA	6	-	59303079-59303128	6qB3	Mus musculus GPRIN family member 3 (Gprin3), mRNA.				C730021L23; C030038J10Rik	C730021L23; C030038J10Rik
Mus musculus	RefSeq	ILMN_222779	ILMN_222779	MKL2	NM_153588.1	NM_153588.1		239719	23956387	NM_153588.1	Mkl2	NP_705816.1	ILMN_2754605	000650709	S	2915	CCTCGGCCACTGACACTGGCCCACTGCAGAACAGCAGTGAAGATAGAGAG	16	+	13412460-13412509	16qA1	Mus musculus MKL/myocardin-like 2 (Mkl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	MRTF-B; mKIAA1243; KIAA1243	MRTF-B; mKIAA1243; KIAA1243
Mus musculus	RefSeq	ILMN_231084	ILMN_231084	KCNT1	NM_175462.3	NM_175462.3		227632	73611941	NM_175462.3	Kcnt1	NP_780671.2	ILMN_2923717	000460121	S	5609	AAGTCCATGGGAAGAGCTGCCACTTCTGAGGCACCTTGGGGAAAGCCACC	2	+	25773509-25773558	2qA3	Mus musculus potassium channel, subfamily T, member 1 (Kcnt1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	slo2; C030030G16Rik; Slack; mKIAA1422	slo2; C030030G16Rik; Slack; mKIAA1422
Mus musculus	RefSeq	ILMN_191463	ILMN_231084	KCNT1	NM_175462.3	NM_175462.3		227632	73611941	NM_175462.3	Kcnt1	NP_780671.2	ILMN_2479273	004070156	S	3876	GGGCCAGTCGTGAGACCACTGGACCACTCTGGAAAGTGGCATGAAGCATT	2	+	25771776-25771825	2qA3	Mus musculus potassium channel, subfamily T, member 1 (Kcnt1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	slo2; C030030G16Rik; Slack; mKIAA1422	slo2; C030030G16Rik; Slack; mKIAA1422
Mus musculus	Riken	ILMN_202758	ILMN_202758	TRAP100-PENDING	ri|9130025J04|PX00026O09|AK020269|2831					AK020269	Trap100-pending		ILMN_1234002	005080681	S	2590	GTACTGGCTCTTCAGGGACTTCCGCTACACGGGGCTTGGTGGTGTCTGTT										
Mus musculus	RefSeq	ILMN_193278	ILMN_231655	CLIP2	NM_001039162.1	NM_001039162.1		269713	85662405	NM_001039162.1	Clip2	NP_001034251.1	ILMN_2495703	002710131	S	4533	ACAGCAGCCTAGAACTGACGCTTTAGTGGCCCGTCTGCAGAGCCAAATCT	5	-	134978427-134978476	5qG2	Mus musculus CAP-GLY domain containing linker protein 2 (Clip2), transcript variant 2, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CLIP-115; Clip1; B230327O20; WSCR4; Cyln2; mKIAA0291; wbscr4	CLIP-115; Clip1; B230327O20; WSCR4; Cyln2; mKIAA0291; wbscr4
Mus musculus	RefSeq	ILMN_217971	ILMN_217971	P2RY2	NM_008773.2	NM_008773.2		18442	31560660	NM_008773.2	P2ry2	NP_032799.2	ILMN_2872106	002030360	S	2846	TGCCAGCTCTGGAGTTTAGGCAGGAATGGGCAAAGGTGACAAGCCTCATG	7	-	100870763-100870812	7qE3	Mus musculus purinergic receptor P2Y, G-protein coupled 2 (P2ry2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y2	P2Y2
Mus musculus	RefSeq	ILMN_219706	ILMN_219706	OLFR575	NM_147114.1	NM_147114.1		259118	22128744	NM_147114.1	Olfr575	NP_667325.1	ILMN_2791541	000020411	S	792	TGCTTTAGCATCCATGCACCGCTTTGGCAAGCACAAGTCACCTATGGCCA	7	-	110103293-110103342	7qE3	Mus musculus olfactory receptor 575 (Olfr575), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR8-1	MOR8-1
Mus musculus	RefSeq	ILMN_190512	ILMN_318293	LOC100047579	XM_001478437.1	XM_001478437.1		100047579	149270663	XM_001478437.1	LOC100047579	XP_001478487.1	ILMN_2470799	004230368	S	2981	GGTTTCCATAGCAGCCTCCTCTTACTGAGTTCCACTCCTGGAGTACCACC					PREDICTED: Mus musculus similar to transmembrane protein 20 (LOC100047579), mRNA.					
Mus musculus	RefSeq	ILMN_194168	ILMN_258525	OMG	NM_019409.1	NM_019409.1		18377	9506940	NM_019409.1	Omg	NP_062282.1	ILMN_2603450	001850274	S	1417	GCTCAATGCTGTGGTCATGCTGGCAGGCTGAGGGTCTGCAGTTTCTGAAA	11	-	79315180-79315200:79315201-79315229	11qB5	Mus musculus oligodendrocyte myelin glycoprotein (Omg), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198357	ILMN_198357	LOC272677	XM_195410.2	XM_195410.2			38084260	XM_195410.2	LOC272677		ILMN_1236973	004810750	S	161	CCATCATGGACAACTGCCAGACTGAAGACACTCTACCACCAACTCTCAGC										
Mus musculus	RefSeq	ILMN_215939	ILMN_215939	MYRIP	NM_144557.4	NM_144557.4		245049	146149268	NM_144557.4	Myrip	NP_653140.1	ILMN_2665441	006960372	S	4152	GGGGTCCTTGTGTCTTCCTATGATGCTCCTGCTGATGTTTGTGTCAGGAC				9qF4	Mus musculus myosin VIIA and Rab interacting protein (Myrip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Movement of a vesicle along an actin filament, mediated by motor proteins [goid 30050] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IDA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence ISO]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IDA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence ISO]	Slac2-c; A230081N12Rik; Slac2c	Slac2-c; A230081N12Rik; Slac2c
Mus musculus	Riken	ILMN_205005	ILMN_205005	ITCH	ri|9530096H18|PX00115G15|AK035725|2517					AK035725	Itch		ILMN_2569275	006420327	S	2239	TCCCTGCTGTGTTAGAAAAACAGGGGCTGGATATCCCAGGAGTCAGAATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence ISA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187665	ILMN_255926	MMP12	NM_008605.3	NM_008605.3		17381	115392137	NM_008605.3	Mmp12	NP_032631.3	ILMN_1250421	006420687	S	1695	GCATGGTTCAGAGGCCAACTGGTTTATCTGTAAGTTGTTTTCTAACAACC	9	+	7358549-7358598	9qA1	Mus musculus matrix metallopeptidase 12 (Mmp12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AV378681; Mmel	AV378681; Mmel
Mus musculus	RefSeq	ILMN_211493	ILMN_211493	COX6B1	NM_025628.2	NM_025628.2		110323	142375877	NM_025628.2	Cox6b1	NP_079904.1	ILMN_2616405	000780093	S	150	CTGCCCCCTTTGACAGCCGCTTCCCCAACCAGAACCAGACTAAGAACTGT	7	-	31409534-31409583	7qB1	Mus musculus cytochrome c oxidase, subunit VIb polypeptide 1 (Cox6b1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]	2010000G05Rik; Cox6b	2010000G05Rik; Cox6b
Mus musculus	RefSeq	ILMN_211493	ILMN_211493	COX6B1	NM_025628.2	NM_025628.2		110323	142375877	NM_025628.2	Cox6b1	NP_079904.1	ILMN_1254971	004900379	S	286	TGTGTACAAGTCCCTCTGTCCCGTGTCATGGGTCTCAGCCTGGGATGACC	7	-	31402162-31402181:31408434-31408463	7qB1	Mus musculus cytochrome c oxidase, subunit VIb polypeptide 1 (Cox6b1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]	2010000G05Rik; Cox6b	2010000G05Rik; Cox6b
Mus musculus	Riken	ILMN_203806	ILMN_203806	A330004N04RIK	ri|A330004N04|PX00131I05|AK039239|3637					AK039239	A330004N04Rik		ILMN_1217986	003800674	S	3277	GCCTCTGATCAGGAATACAAGTGGCAGGCAATACTACTGTGGATGTGCAG										
Mus musculus	RefSeq	ILMN_220213	ILMN_255003	LONP1	NM_028782.2	NM_028782.2		74142	116089321	NM_028782.2	Lonp1	NP_083058.2	ILMN_2719163	000050450	S	2236	GGGAAGCCTGTGTTCACAGTGGAGCGCATGTACGAAGTCACACCTCCTGG	17	-	56754704-56754753	17qD	Mus musculus lon peptidase 1, mitochondrial (Lonp1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Prss15; LON; 1200017E13Rik	Prss15; LON; 1200017E13Rik
Mus musculus	RefSeq	ILMN_222621	ILMN_222621	CCDC90B	NM_025515.2	NM_025515.2		66365	142351851	NM_025515.2	Ccdc90b	NP_079791.1	ILMN_2752408	006100215	S	920	GAAAAGCTGTCACTCAAACCTGGCTTGATATAGAAGTCCTTATCCTCTGA	7	+	99730509-99730558	7qE1	Mus musculus coiled-coil domain containing 90B (Ccdc90b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			C86558; MGC144297; 2310015N07Rik	C86558; MGC144297; 2310015N07Rik
Mus musculus	RefSeq	ILMN_185233	ILMN_185233	V1RG1	NM_145843.1	NM_145843.1		252905	22003893	NM_145843.1	V1rg1	NP_665842.1	ILMN_2995511	006200255	S	575	GACTGTGCTTGGGTCTCATGGCCTGCTCAAGTGTGTCCATGATCATTATC	7	-	12255244-12255293	7qA1	Mus musculus vomeronasal 1 receptor, G1 (V1rg1), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_235753	ILMN_235753	EG433182	NM_001025388.1	NM_001025388.1		433182	70794815	NM_001025388.1	EG433182	NP_001020559.1	ILMN_2953277	002690400	S	1340	AGCGCCTGGCCAAGTACAACCAGATCCTTAGAATTGAGGAAGAGCTGGGC	18	+	48207615-48207664	18qC	Mus musculus predicted gene, EG433182 (EG433182), mRNA.					
Mus musculus	RefSeq	ILMN_218290	ILMN_218290	GPR65	NM_008152.2	NM_008152.2		14744	142361681	NM_008152.2	Gpr65	NP_032178.1	ILMN_2693991	005670687	S	1845	CTCTGTATACGTCTGTCTTCAACAAATGTAAGGACTAAATACCCCTCCCG	12	+	99514652-99514701	12qE	Mus musculus G-protein coupled receptor 65 (Gpr65), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	TDAG8; Dig1; Gpcr25	TDAG8; Dig1; Gpcr25
Mus musculus	RefSeq	ILMN_197286	ILMN_197286	LOC218357	XM_138742.2	XM_138742.2			38074975	XM_138742.2	LOC218357		ILMN_1248656	001500315	S	1014	GAGAGTGACTGCTAGAGATCAATCCCTTGCTGCCCCAGCTACAATCCCTA										
Mus musculus	Riken	ILMN_204443	ILMN_204443	A730064B11RIK	ri|A730064B11|PX00152E20|AK043174|1344					AK043174	A730064B11Rik		ILMN_1248319	005260064	S	897	TGCCTGAGTATCAGCAGCATGAGAATGACACAGAACTGGGGAATGCCACA										
Mus musculus	Riken	ILMN_206773	ILMN_206773	GALGT1	ri|E030004J15|PX00204E08|AK086849|1500					AK086849	Galgt1		ILMN_1241182	006560736	S	1180	AAACTGGCTTTTCTGAACCTGCGCCTACCTTAGGGCCTTTGCATCTGCCG										
Mus musculus	RefSeq	ILMN_200162	ILMN_200162	LOC385834	XM_358965.1	XM_358965.1			38080742	XM_358965.1	LOC385834		ILMN_1218624	005260437	S	1140	TTGCCTGCCTTTGGGCAGCAGGTGCAGAGATCCACCCCCAGCAATCATGA										
Mus musculus	MEEBO	ILMN_195363	ILMN_195363	FCMD	scl25422.12_359				31981694	NM_139309	Fcmd		ILMN_2514924	003710328	S	14	GGCCCATTTAGTCATCCAGACTTCTGTCTACTTACGAGTAGCTTTCGCAG										
Mus musculus	RefSeq	ILMN_220240	ILMN_220240	GYS2	NM_145572.1	NM_145572.1		232493	21704149	NM_145572.1	Gys2	NP_663547.1	ILMN_2924505	004220392	S	1069	CAAGGCCAGGATACAGGATTTCGTTCGAGGTCATTTCTATGGTCATCTGG	6	-	142403036-142403062:142403652-142403674	6qG2	Mus musculus glycogen synthase 2 (Gys2), mRNA.		The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UDP + (1,4)-alpha-D-glucosyl(n+1) [goid 4373] [evidence IEA]	BC021322; MGC29379	BC021322; MGC29379
Mus musculus	RefSeq	ILMN_220240	ILMN_220240	GYS2	NM_145572.1	NM_145572.1		232493	21704149	NM_145572.1	Gys2	NP_663547.1	ILMN_2924504	005890563	S	1181	GGAGCAGACATCTTCCTGGAGTCCTTATCCAGGCTTAATTTCCTCCTGAG	6	-	142400143-142400160:142402942-142402973	6qG2	Mus musculus glycogen synthase 2 (Gys2), mRNA.		The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UDP + (1,4)-alpha-D-glucosyl(n+1) [goid 4373] [evidence IEA]	BC021322; MGC29379	BC021322; MGC29379
Mus musculus	RefSeq	ILMN_217305	ILMN_217305	PRAMEF12	NM_029948.2	NM_029948.2		77632	142377452	NM_029948.2	Pramef12	NP_084224.1	ILMN_2681676	004570255	S	2268	CTTTGTTTGGTCTACAGATGATTGGCCCTATTGCACTGTGGGTGGGCGGC	4	-	143981719-143981768	4qE1	Mus musculus PRAME family member 12 (Pramef12), mRNA.				C86578; AU023001; 4930569K13Rik	C86578; AU023001; 4930569K13Rik
Mus musculus	RefSeq	ILMN_214862	ILMN_214862	PSMC5	NM_008950.1	NM_008950.1		19184	7110702	NM_008950.1	Psmc5	NP_032976.1	ILMN_1220632	006370307	S	615	GGCTCATCATACAGACTGTACCTTTATTCGTGTCTCTGGCTCTGAACTGG	11	+	106123276-106123325	11qE1	Mus musculus protease (prosome, macropain) 26S subunit, ATPase 5 (Psmc5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A complex that contains kinase activity directed towards the C-terminal Domain (CTD) of the largest subunit of RNA polymerase II and is essential for initiation at RNA polymerase II promoters in vitro. In S. cerevisiae, it is composed of the 5-subunit core (Rad3p, Tfb1p, Tfb2p, Ssl1p and Tfb4p), Ssl2p, and TFIIK (Kin28p, Ccl1p, and Tfb3p). All of the subunits have equivalents in humans: the 5 subunit core is composed of XPD, p62, p55, p44, p34; the equivalent of the TFIIK subcomplex is composed of MO15, Mat1, and a cyclin; the human equivalent of Ssl2p is XPB [goid 5675] [evidence ISA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]	mSUG1	mSUG1
Mus musculus	RefSeq	ILMN_214862	ILMN_214862	PSMC5	NM_008950.1	NM_008950.1		19184	7110702	NM_008950.1	Psmc5	NP_032976.1	ILMN_1251877	004200504	S	1200	CATGTCCATCAAGAAGCTATGGAAGTGAGGCTGTGTCCTTTGTGTGCTCC	11	+	106124349-106124376:106124377-106124398	11qE1	Mus musculus protease (prosome, macropain) 26S subunit, ATPase 5 (Psmc5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A complex that contains kinase activity directed towards the C-terminal Domain (CTD) of the largest subunit of RNA polymerase II and is essential for initiation at RNA polymerase II promoters in vitro. In S. cerevisiae, it is composed of the 5-subunit core (Rad3p, Tfb1p, Tfb2p, Ssl1p and Tfb4p), Ssl2p, and TFIIK (Kin28p, Ccl1p, and Tfb3p). All of the subunits have equivalents in humans: the 5 subunit core is composed of XPD, p62, p55, p44, p34; the equivalent of the TFIIK subcomplex is composed of MO15, Mat1, and a cyclin; the human equivalent of Ssl2p is XPB [goid 5675] [evidence ISA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]	mSUG1	mSUG1
Mus musculus	RefSeq	ILMN_198523	ILMN_198523	LOC194586	XM_112088.2	XM_112088.2			38085970	XM_112088.2	LOC194586		ILMN_2531988	004490128	S	653	ATGGTTGGGAAGTTATAGACACCAGGGGAACCATAGAGAAGATCTGTGAG										
Mus musculus	RefSeq	ILMN_254130	ILMN_254130	D830050J10RIK	NM_178264.3	NM_178264.3		352968	124358907	NM_178264.3	D830050J10Rik	NP_839995.2	ILMN_2828438	002810021	S	745	GTGGTAGCAGAGTGACTGTTTCTGGTTGGAGGCCAGTGGTATTGGGCTGC				6qE3	Mus musculus RIKEN cDNA D830050J10 gene (D830050J10Rik), mRNA.					
Mus musculus	MEEBO	ILMN_220205	ILMN_220205	4932435O22RIK	scl39355.3.1_115	NM_177008.2			31342579	NM_177008.2	4932435O22Rik		ILMN_2719076	000290326	S	2721	GATGGCTTATGGCACATCCATATTAGGAACTAAATATCAGTAAGGCCTTT										
Mus musculus	RefSeq	ILMN_217518	ILMN_228927	4930431B09RIK	XR_002338.2	XR_002338.2		74645	149251333	XR_002338.2	4930431B09Rik		ILMN_2684205	006840270	S	1820	GTCAGCTCCCCAAACTGATAAACCGTGAGGGTGCTCTTTGTGACTGAATT	3	-	100275681-100275730	3qF2.2	PREDICTED: Mus musculus RIKEN cDNA 4930431B09 gene (4930431B09Rik), misc RNA.					
Mus musculus	Riken	ILMN_202869	ILMN_202869	4930429A22RIK	ri|4930429A22|PX00030D19|AK029652|2973					AK029652	4930429A22Rik		ILMN_2552931	001090369	S	2885	CCTTCCTGATGCAGCGACCCTTAACACAGTTCCTCATGCTGTGGTGACAC										
Mus musculus	RefSeq	ILMN_190345	ILMN_315879	TRIM27	NM_009054.2	NM_009054.2		19720	125347388	NM_009054.2	Trim27	NP_033080.2	ILMN_2499746	006760343	S	1682	GTGGACCATAGGTGTCTGTGAAGACTCGGTGTGCAGAAAAGGTGGGGTGA	13	+	21284098-21284147	13qA3.1	Mus musculus tripartite motif-containing 27 (Trim27), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISO]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any epigenetic process that stops, prevents or reduces the rate of gene expression [goid 45814] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Rfp; AW538890	Rfp; AW538890
Mus musculus	Riken	ILMN_205446	ILMN_205446	DTNA	ri|3830432L08|PX00313I15|AK028402|1491					AK028402	Dtna		ILMN_2572620	006400747	S	1264	ATGCTGAGAATACGGACTCCCGGTGCTGTGGAAAAGACTTAAAGGCAGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex comprising alpha- and beta-dystrobrevin; forms part of the dystrophin glycoprotein complex [goid 16014] [evidence NAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence TAS]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204620	ILMN_204620	B430005K18RIK	ri|B430005K18|PX00070H17|AK046551|1744					AK046551	B430005K18Rik		ILMN_1247450	001850253	S	1614	GGATGGTTACTGACACCCAAACTGCCATAGGAGATGCTGGGAGGCTTTGC										
Mus musculus	RefSeq	ILMN_209340	ILMN_209340	4632404H12RIK	NM_028726.1	NM_028726.1		74034	27229166	NM_028726.1	4632404H12Rik	NP_083002.1	ILMN_2629897	005860411	S	2655	GGCACGATTTTGAATCCTCTCTGCTTTGTTACTTCGTGTTTTAAAGTTGG	3	-	89853524-89853573		Mus musculus RIKEN cDNA 4632404H12 gene (4632404H12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209340	ILMN_209340	4632404H12RIK	NM_028726.1	NM_028726.1		74034	27229166	NM_028726.1	4632404H12Rik	NP_083002.1	ILMN_2594872	003710709	S	596	TGGGACCAATTCATCATGTGAGCCGTTGGCCCGTCTACCGTCACCACCTC	3	-	89858522-89858571		Mus musculus RIKEN cDNA 4632404H12 gene (4632404H12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209340	ILMN_209340	4632404H12RIK	NM_028726.1	NM_028726.1		74034	27229166	NM_028726.1	4632404H12Rik	NP_083002.1	ILMN_2594873	003440097	S	598	GGGACCAATTCATCATGTGAGCCGTTGGCCCGTCTACCGTCACCACCTCT	3	-	89858520-89858569		Mus musculus RIKEN cDNA 4632404H12 gene (4632404H12Rik), mRNA.					
Mus musculus	MEEBO	ILMN_217182	ILMN_217182	D930042L22	scl43336.4.1_199				51828959	XM_488631	D930042L22		ILMN_2679974	001260168	S	1908	CAGACAGGGGTAGATTTCTGCTGTTATCTAGTGGGTTGATGCTGGGCTGC										
Mus musculus	RefSeq	ILMN_207523	ILMN_207523	PCNP	XM_132579.5	XM_132579.5			38079826	XM_132579.5	Pcnp		ILMN_1260502	002850270	I	150	CTAGCAAGCAGTGAAGAGACTGTTGGGTCAGTAGGTGACAGCTGCAGAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]			
Mus musculus	RefSeq	ILMN_200495	ILMN_200495	LOC383269	XM_356956.1	XM_356956.1			38082777	XM_356956.1	LOC383269		ILMN_2538972	005560397	S	595	CCGGGGATAGATGGAGAGGCAGCATCAGGCACAGAAAGACTGCCCACAGA										
Mus musculus	MEEBO	ILMN_224176	ILMN_224176	EN1	scl17554.3.1_315				7106304	NM_010133	En1		ILMN_2776047	007380215	S	2262	TACAACCCCACAGACTGCGAGACTGAACCGCCGCTACAAGCCAAAGATTT						A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages [goid 30917] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217431	ILMN_217431	1600012F09RIK	NM_025904.1	NM_025904.1		67008	13385397	NM_025904.1	1600012F09Rik	NP_080180.1	ILMN_2683155	006840730	S	1085	ACATTAAAGTCAAGAGACTGTAGAAACTGACACAATATTTATATTATTGA	13	-	17774069-17774118	13qA2	Mus musculus RIKEN cDNA 1600012F09 gene (1600012F09Rik), mRNA.					
Mus musculus	Riken	ILMN_204872	ILMN_204872	A130096D14RIK	ri|A130096D14|PX00126C11|AK038333|1411					AK038333	A130096D14Rik		ILMN_1230500	002370706	S	1357	CTTCTGCAGTTGACTTAAATCTGTCAGGGTCTTGTATCTCCCCCCCACCC										
Mus musculus	RefSeq	ILMN_191204	ILMN_210170	MYO5A	NM_010864.2	NM_010864.2		17918	115511051	NM_010864.2	Myo5a	NP_034994.2	ILMN_1250286	000990184	S	11157	GGAAAGTTCCAGTTGTTGCAGCAGTATTGTACAGATGGGCTCATGGCATT	9	+	75070968-75071017	9qD	Mus musculus myosin Va (Myo5a), mRNA.	Any complex of actin, myosin, and accessory proteins [goid 42641] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 6582] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IDA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; Movement of a vesicle along an actin filament, mediated by motor proteins [goid 30050] [evidence TAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence IDA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process by which endoplasmic reticulum is transported to, and/or maintained in, a specific location within the cell [goid 51643] [evidence IMP]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IMP]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IDA]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement [goid 31987] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence ISA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of the IP3 receptor [goid 31585] [evidence IMP]; Any process by which a secretory granule is transported to, and/or maintained in, a specific location within the cell [goid 32252] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the plus end of a microtubule [goid 51010] [evidence IPI]	flail; d; 9630007J19Rik; AI413174; MVa; d-120J; Sev-1; Dbv; Myo5; AI661011; MyoVA; flr	flail; d; 9630007J19Rik; AI413174; MVa; d-120J; Sev-1; Dbv; Myo5; AI661011; MyoVA; flr
Mus musculus	RefSeq	ILMN_210170	ILMN_210170	MYO5A	NM_010864.2	NM_010864.2		17918	115511051	NM_010864.2	Myo5a	NP_034994.2	ILMN_2602931	002600619	S	4605	CAGATGACCCTAAGAAGTATCAATCCTATCGGATTTCACTTTACAAAAGG	9	+	75043952-75044001	9qD	Mus musculus myosin Va (Myo5a), mRNA.	Any complex of actin, myosin, and accessory proteins [goid 42641] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 6582] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IDA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; Movement of a vesicle along an actin filament, mediated by motor proteins [goid 30050] [evidence TAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence IDA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process by which endoplasmic reticulum is transported to, and/or maintained in, a specific location within the cell [goid 51643] [evidence IMP]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IMP]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IDA]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement [goid 31987] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence ISA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of the IP3 receptor [goid 31585] [evidence IMP]; Any process by which a secretory granule is transported to, and/or maintained in, a specific location within the cell [goid 32252] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the plus end of a microtubule [goid 51010] [evidence IPI]	flail; d; 9630007J19Rik; AI413174; MVa; d-120J; Sev-1; Dbv; Myo5; AI661011; MyoVA; flr	flail; d; 9630007J19Rik; AI413174; MVa; d-120J; Sev-1; Dbv; Myo5; AI661011; MyoVA; flr
Mus musculus	RefSeq	ILMN_210170	ILMN_210170	MYO5A	NM_010864.2	NM_010864.2		17918	115511051	NM_010864.2	Myo5a	NP_034994.2	ILMN_1254736	000770575	S	6742	GCAGACGCTGGGGAAGTAGAGTTAGACAGAGTGGCTGTTGATGTCATTGC	9	+	75066553-75066602	9qD	Mus musculus myosin Va (Myo5a), mRNA.	Any complex of actin, myosin, and accessory proteins [goid 42641] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 6582] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IDA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; Movement of a vesicle along an actin filament, mediated by motor proteins [goid 30050] [evidence TAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence IDA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process by which endoplasmic reticulum is transported to, and/or maintained in, a specific location within the cell [goid 51643] [evidence IMP]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IMP]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IDA]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement [goid 31987] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence ISA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of the IP3 receptor [goid 31585] [evidence IMP]; Any process by which a secretory granule is transported to, and/or maintained in, a specific location within the cell [goid 32252] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the plus end of a microtubule [goid 51010] [evidence IPI]	flail; d; 9630007J19Rik; AI413174; MVa; d-120J; Sev-1; Dbv; Myo5; AI661011; MyoVA; flr	flail; d; 9630007J19Rik; AI413174; MVa; d-120J; Sev-1; Dbv; Myo5; AI661011; MyoVA; flr
Mus musculus	MEEBO	ILMN_194193	ILMN_194193	2310026J01RIK	scl18791.2_626				31342862	NM_177845	2310026J01Rik		ILMN_2746438	002340687	S	3807	AGTTTGATCTGGTTCTTCACATGTTAGCTGCACAGAGGTTGTCTATTACC										
Mus musculus	MEEBO	ILMN_194193	ILMN_194193	2310026J01RIK	scl18791.2_626				31342862	NM_177845	2310026J01Rik		ILMN_2774917	003940215	S	2495	TGCAGGGGACAGAACCCTCTGCCCATCTACCTCACCATCAATGTCAAGGA										
Mus musculus	RefSeq	ILMN_214951	ILMN_214951	FAM118B	NM_175411.4	NM_175411.4		109229	146198576	NM_175411.4	Fam118b	NP_780620.1	ILMN_2707887	006250215	S	1544	GAACTATATAGTTAGTATGAGTTAGCATTCTTATTTTATATCCTGTATAA				9qA4	Mus musculus family with sequence similarity 118, member B (Fam118b), transcript variant 2, mRNA.				2700018L24Rik; C030004A17Rik; 2310022O21Rik	2700018L24Rik; C030004A17Rik; 2310022O21Rik
Mus musculus	RefSeq	ILMN_214951	ILMN_214951	FAM118B	NM_175411.4	NM_175411.4		109229	146198576	NM_175411.4	Fam118b	NP_780620.1	ILMN_2653842	004040373	S	1466	CCTTCTCAGGACAGGCACTTACCCAATTCCTTAGAGCACTACTAGTTCCT				9qA4	Mus musculus family with sequence similarity 118, member B (Fam118b), transcript variant 2, mRNA.				2700018L24Rik; C030004A17Rik; 2310022O21Rik	2700018L24Rik; C030004A17Rik; 2310022O21Rik
Mus musculus	RefSeq	ILMN_215404	ILMN_215404	OAS1E	NM_145210.1	NM_145210.1		231699	21630286	NM_145210.1	Oas1e	NP_660211.1	ILMN_1228312	006370170	S	1542	GGCCGGGTTTATGGCAGTTCGGGAAAATAAAACTGCGGATACTTTAAATT	5	-	121236418-121236467	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1E (Oas1e), mRNA.				C87484; oasl7; MGC124108	C87484; oasl7; MGC124108
Mus musculus	RefSeq	ILMN_219925	ILMN_243792	EXOSC7	NM_001081188.1	NM_001081188.1		66446	124487126	NM_001081188.1	Exosc7	NP_001074657.1	ILMN_2715289	006520192	S	889	CGAGAGTCGGGTTCCTGGGGTGATTTCTCTCCACTGCACGTTGGTTGCCT	9	+	123045099-123045121:123045122-123045148	9qF4	Mus musculus exosome component 7 (Exosc7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [evidence IEA]	AV212732; mKIAA0116; 2610002K22Rik	AV212732; mKIAA0116; 2610002K22Rik
Mus musculus	Riken	ILMN_206314	ILMN_206314	PTPRN2	ri|D130007B22|PX00182I11|AK083776|4220					AK083776	Ptprn2		ILMN_1222290	007330129	S	4051	CTGCACAGGCAGAGAGCTCCTTGTGGTCACATGCTTCAGAGCCCTGTCCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221763	ILMN_221763	CUL1	NM_012042.3	NM_012042.3		26965	34328459	NM_012042.3	Cul1	NP_036172.1	ILMN_1226323	004640367	S	2826	GACACATTTCAGTCTGTAAACAGACGCCAATGCCATTTACCCTAACTCAC	6	+	47475807-47475856	6qB2.3	Mus musculus cullin 1 (Cul1), mRNA.	A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1) [goid 19005] [evidence IDA]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IC ]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187648	ILMN_187648	AI317223	scl13050.1.1_236				50582544	NM_001002764	AI317223		ILMN_2471996	004150487	S	11	CACCATTCCTGCTCTGGGCTTCACACCAGAAGAGTCCTAGGCCTTAGGTC										
Mus musculus	MEEBO	ILMN_187648	ILMN_187648	AI317223	scl13050.1.1_236				50582544	NM_001002764	AI317223		ILMN_1236392	003710551	S	1	TCTGCAACTCCACCATTCCTGCTCTGGGCTTCACACCAGAAGAGTCCTAG										
Mus musculus	MEEBO	ILMN_194659	ILMN_194659	SOLH	scl050817.2_62				7657600	NM_015830	Solh		ILMN_2508416	001230086	S	20	AGCCCTTACCTGCCACATGGACGCCTGAGTCATTTCCTGGGCCACTGTTG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222611	ILMN_222611	OLFR71	NM_019486.1	NM_019486.1		56015	11464984	NM_019486.1	Olfr71	NP_062359.1	ILMN_1215564	007510528	S	758	GCACTATCATCTTCATGTACATGAAACCCAAGAGCAAGGAAGCCCGGATC	4	-	43718631-43718680	4qB1	Mus musculus olfactory receptor 71 (Olfr71), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence TAS]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR262-4; mOR17	MOR262-4; mOR17
Mus musculus	RefSeq	ILMN_214520	ILMN_214520	SGPP1	NM_030750.2	NM_030750.2		81535	31543695	NM_030750.2	Sgpp1	NP_109675.1	ILMN_2877165	002570754	S	3078	CAGATGTGCTCTGTGAGTTGAGCTATAGACAGGGTCCCCCACTTTGGGTC	12	-	76815364-76815413	12qC3	Mus musculus sphingosine-1-phosphate phosphatase 1 (Sgpp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IDA]; The chemical reactions and pathways involving sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues [goid 6670] [evidence IDA]; The chemical reactions and pathways involving sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol [goid 6668] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: sphingosine 1-phosphate + H2O = sphingosine + phosphate [goid 42392] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	mSPP1; SPP1; AI463453; Spph1; SPP	mSPP1; SPP1; AI463453; Spph1; SPP
Mus musculus	RefSeq	ILMN_219886	ILMN_245089	SATL1	XM_909379.2	XM_909379.2		73809	94408065	XM_909379.2	Satl1	XP_914472.1	ILMN_1244241	003180300	S	2114	GGAATCAGGATTCTGTTGAGTACTATACTCGCCTAGGGGCTTTAGACCTC				XqE1	PREDICTED: Mus musculus spermidine/spermine N1-acetyl transferase-like 1 (Satl1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199618	ILMN_199618	LOC383741	XM_357219.1	XM_357219.1			38075283	XM_357219.1	LOC383741		ILMN_1216443	001780291	S	19	GCATCAGCTCCTGTGAGTGGTCAACAGCTGCTATGGTGGCTGTCACCTCA										
Mus musculus	RefSeq	ILMN_257569	ILMN_257569	KRT73	NM_212485.2	NM_212485.2		223915	118131071	NM_212485.2	Krt73	NP_997650.1	ILMN_3007409	003190402	S	1994	CAAGAACCAACCCAGCATGGATCAAGCACCTGGCACCGTTGTATCTGGCA	15	-	101623849-101623898	15qF2	Mus musculus keratin 73 (Krt73), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Kb36; BC067067	Kb36; BC067067
Mus musculus	RefSeq	ILMN_214330	ILMN_257569	KRT73	NM_212485.2	NM_212485.2		223915	118131071	NM_212485.2	Krt73	NP_997650.1	ILMN_2646916	003370494	S	1955	GGGTGCAAGAGACTTGAAGTGTGTTGATGGACATTCCTGCAAGAACCAAC	15	-	101623888-101623937	15qF2	Mus musculus keratin 73 (Krt73), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Kb36; BC067067	Kb36; BC067067
Mus musculus	RefSeq	ILMN_211707	ILMN_211707	SUPV3L1	NM_181423.2	NM_181423.2		338359	31340650	NM_181423.2	Supv3l1	NP_852088.1	ILMN_2618745	002470187	S	2300	AGAGAAAGTGGGGACACGGAGAAAGAAGAAGGACCCCGACTCCGATTAGG	10	-	61892166-61892167:61892168-61892215	10qB4	Mus musculus suppressor of var1, 3-like 1 (S. cerevisiae) (Supv3l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	6330443E10Rik	6330443E10Rik
Mus musculus	MEEBO	ILMN_212256	ILMN_212256	E2F2	scl00329958.1_84	NM_183301.1			34303972	NM_183301.1	E2f2		ILMN_2624477	002810494	S	1150	GGCTTAAGTTTCCGTCGTACCCAGAGGCCCCACCTCACCCAGGTCGTCTC						Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_198444	ILMN_198444	LOC381224	XM_140772.3	XM_140772.3			38085158	XM_140772.3	LOC381224		ILMN_2531708	002230164	S	4614	CTGGCCATCCTGCGGCAGCCTCCGAAGCGCTGACAAAGCCTTCAAAACAA										
Mus musculus	RefSeq	ILMN_217843	ILMN_217843	PRSS22	NM_133731.1	NM_133731.1		70835	19526923	NM_133731.1	Prss22	NP_598492.1	ILMN_2688287	000650324	S	931	GCAAAGGATCGTTCAAGGGGTGCAGCTGCGCGGGTACTTGGCGGACAGTG	17	-	24130827-24130876	17qA3.3	Mus musculus protease, serine, 22 (Prss22), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	4733401N09Rik; BSSP-4; SP001LA	4733401N09Rik; BSSP-4; SP001LA
Mus musculus	RefSeq	ILMN_190461	ILMN_242289	2310067B10RIK	NM_028014.3	NM_028014.3		71947	112421147	NM_028014.3	2310067B10Rik	NP_082290.2	ILMN_1245489	005820142	S	4696	TTCAAGATGCTGTATCCTCCTGCCCATGTCCCATCTTCCCCGGCAAGGGC	11	+	115660047-115660096	11qE2	Mus musculus RIKEN cDNA 2310067B10 gene (2310067B10Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	RP23-354K2.3; mKIAA0195	RP23-354K2.3; mKIAA0195
Mus musculus	RefSeq	ILMN_220672	ILMN_220672	HSPA14	NM_015765.2	NM_015765.2		50497	82880661	NM_015765.2	Hspa14	NP_056580.2	ILMN_2725128	002750647	S	1686	CTATAATATCAACATAATTTGGTTTTGTGTATAAGTGTTGTTTATAATAA	2	-	3406181-3406230	2qA1	Mus musculus heat shock protein 14 (Hspa14), transcript variant 1, mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	70kDa; NST-1; Hsp70-4; HSP70L1	70kDa; NST-1; Hsp70-4; HSP70L1
Mus musculus	RefSeq	ILMN_201115	ILMN_201115	LOC384818	XM_357879.1	XM_357879.1			38089251	XM_357879.1	LOC384818		ILMN_1217151	006940328	S	451	GCTCAGAAACGCAAGCTGGCAGATAAAACAGGTTTGCATTGTGTTCTTTG										
Mus musculus	RefSeq	ILMN_223065	ILMN_223065	LLGL2	NM_145438.2	NM_145438.2		217325	144922655	NM_145438.2	Llgl2	NP_663413.2	ILMN_1224093	001990019	S	3399	CTGTCTGTCCTGACCCTTTTACCAATGTTGCACAGTTTTTATTTCCACCC	11	+	115716951-115717000	11qE2	Mus musculus lethal giant larvae homolog 2 (Drosophila) (Llgl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Llglh2; MGC27928; 9130006H11Rik	Llglh2; MGC27928; 9130006H11Rik
Mus musculus	MEEBO	ILMN_219316	ILMN_219316	SEPM	scl41904.3_0	NM_053267.1			23956245	NM_053267.1	Sepm		ILMN_1226838	005550195	S	596	CGCCAGTCTCCAAAGCAACGGAAATGGGGTGTGTGGGGGGAATCTCAATC										
Mus musculus	RefSeq	ILMN_222937	ILMN_222937	OLFR273	NM_146824.1	NM_146824.1		258821	22129212	NM_146824.1	Olfr273	NP_667035.1	ILMN_1255796	004730743	S	778	GCAAAACCCAAATCTCAAGATCTGACTGGGCAAGACAAGTTCCAAACCTC	4	-	52868556-52868605	4qB2	Mus musculus olfactory receptor 273 (Olfr273), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR262-8	MOR262-8
Mus musculus	Riken	ILMN_204535	ILMN_204535	B230386D16RIK	ri|B230386D16|PX00161H18|AK046451|1121					AK046451	B230386D16Rik		ILMN_2565729	005810047	S	884	GACATTTTCACAGATGAGAGCGAGGACGAGAAGGACGATTGCGTGGCCGG										
Mus musculus	RefSeq	ILMN_200655	ILMN_225148	GM1276	XM_908720.2	XM_908720.2		383435	94406073	XM_908720.2	Gm1276	XP_913813.1	ILMN_1228055	005960403	S	3210	CCAACAAATCCAACCCCAAACCACCATAGTTCATCAGACCCCAGGTCATC				19qA	PREDICTED: Mus musculus gene model 1276, (NCBI) (Gm1276), mRNA.					
Mus musculus	MEEBO	ILMN_193011	ILMN_193011	C630022N07RIK	scl0319360.1_291						C630022N07Rik		ILMN_2493338	003360564	S	5	CACTGGGCCTGGCCCCCCGGGTATTTATTGCTGTACATAGTGTATGTTTG										
Mus musculus	MEEBO	ILMN_213378	ILMN_213378	HOXA5	scl29006.2.1_119	NM_010453.2			24475600	NM_010453.2	Hoxa5		ILMN_1217978	007100291	S	1612	ACTCCAAGCGGTGTGTCCCTGCGTGCCTTTGTAGGACCCTTTGCACGAAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_191686	ILMN_258589	SENP8	NM_027838.2	NM_027838.2		71599	46402515	NM_027838.2	Senp8	NP_082114.1	ILMN_2744936	002030270	S	1970	GAAACTGACTTCAGCTACTTCTCCACTCTAACCCTGACCCCAGCGTTCAT				9qB	Mus musculus SUMO/sentrin specific peptidase 8 (Senp8), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence ISO]; Catalysis of the hydrolysis of NEDD8, a small ubiquitin-related modifier, from previously neddylated substrates [goid 19784] [evidence ISO]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Den1; 9130010J17Rik; Nedp1; Prsc2; AU020827	Den1; 9130010J17Rik; Nedp1; Prsc2; AU020827
Mus musculus	RefSeq	ILMN_209497	ILMN_209497	CNN2	NM_007725.2	NM_007725.2		12798	116268119	NM_007725.2	Cnn2	NP_031751.1	ILMN_2596369	007100692	S	504	TGGAGTTAAGTATTCGGAGAAACAGGAGAGGAACTTTGACGACGCCACCA	10	+	79455994-79456043	10qC1	Mus musculus calponin 2 (Cnn2), mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	AA408047; AI324678	AA408047; AI324678
Mus musculus	RefSeq	ILMN_209497	ILMN_209497	CNN2	NM_007725.2	NM_007725.2		12798	116268119	NM_007725.2	Cnn2	NP_031751.1	ILMN_1226666	000150039	S	1389	CAAGGGGTTTTGTGGGGGTTTTGCCTCAAAAGTATTGGAGTACACTAGGC	10	+	79457752-79457801	10qC1	Mus musculus calponin 2 (Cnn2), mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	AA408047; AI324678	AA408047; AI324678
Mus musculus	RefSeq	ILMN_211454	ILMN_211454	A830018L16RIK	NM_177173.4	NM_177173.4		320492	141802484	NM_177173.4	A830018L16Rik	NP_796147.2	ILMN_2616075	004890259	S	2412	CACCTTACTTTTGGAATGTGCTTTGTACTTATTCTAAATGAATTGATATC	1	+	11965622-11965671	1qA2	Mus musculus RIKEN cDNA A830018L16 gene (A830018L16Rik), mRNA.				VEST1	VEST1
Mus musculus	RefSeq	ILMN_214799	ILMN_230578	RASGRP4	NM_145149.3	NM_145149.3		233046	142378014	NM_145149.3	Rasgrp4	NP_660131.2	ILMN_1228808	003460762	S	3201	GAGGCCCTAAATGCCCTACACCCAGCCGCCACTCAACACTATGAACCGTG	7	+	29937614-29937663	7qB1	Mus musculus RAS guanyl releasing protein 4 (Rasgrp4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185471	ILMN_230578	RASGRP4	NM_145149.3	NM_145149.3		233046	142378014	NM_145149.3	Rasgrp4	NP_660131.2	ILMN_2427293	000050167	S	4318	AATCTCAGAAGGGGTTGACCATGTGAGAACTAGAGCCTGGCCGACAATCA	7	+	29938731-29938780	7qB1	Mus musculus RAS guanyl releasing protein 4 (Rasgrp4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213965	ILMN_213965	SOSTDC1	NM_025312.2	NM_025312.2		66042	142377757	NM_025312.2	Sostdc1	NP_079588.1	ILMN_2642800	005890653	S	1237	GGGAGTGGAATGCCAGCAATTCATGGCAGCAGCTAATAGGTAAAGCCGGT	12	+	37044582-37044631	12qA3	Mus musculus sclerostin domain containing 1 (Sostdc1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	0610006G05Rik; USAG-1; ectodin; Sostl; Wise	0610006G05Rik; USAG-1; ectodin; Sostl; Wise
Mus musculus	RefSeq	ILMN_214790	ILMN_214790	PTH2R	NM_139270.2	NM_139270.2		213527	110625877	NM_139270.2	Pth2r	NP_644676.1	ILMN_1247761	007330377	S	1857	CCCCGAGGAGACTAAGGAAGGTCACAGGCGACAGGGAGATGATAGTCCAG	1	+	65435261-65435310	1qC2	Mus musculus parathyroid hormone 2 receptor (Pth2r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_247213	ILMN_247213	DUSP23	NM_026725.2	NM_026725.2		68440	128485684	NM_026725.2	Dusp23	NP_081001.1	ILMN_3160863	000670681	S	506	GGCCGTCTTCCAGTTCTACCAGCGAACAAAATGAGGACTTCAACAGCCCG	1	-	174561761-174561771:174561772-174561810	1qH3	Mus musculus dual specificity phosphatase 23 (Dusp23), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	MGC73633; 1300005N15Rik; LDP-3	MGC73633; 1300005N15Rik; LDP-3
Mus musculus	RefSeq	ILMN_209515	ILMN_209515	NPAS4	NM_153553.3	NM_153553.3		225872	142365106	NM_153553.3	Npas4	NP_705781.1	ILMN_1251414	003400523	S	3014	TTCTCTACAAACCAGTAACGGGATTTCAATTCCGACGGACTCTGCCGCCC	19	-	4984568-4984617	19qA	Mus musculus neuronal PAS domain protein 4 (Npas4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Nxf; LE-PAS	Nxf; LE-PAS
Mus musculus	RefSeq	ILMN_209515	ILMN_209515	NPAS4	NM_153553.3	NM_153553.3		225872	142365106	NM_153553.3	Npas4	NP_705781.1	ILMN_2596527	000840609	S	924	CTCTGTAAATCATGGTATGGACTGCTACACCCCGAGGACCTGGCCCAAGC	19	-	4987446-4987450:4987778-4987822	19qA	Mus musculus neuronal PAS domain protein 4 (Npas4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Nxf; LE-PAS	Nxf; LE-PAS
Mus musculus	RefSeq	ILMN_215187	ILMN_215187	OLFR1295	NM_146403.1	NM_146403.1		258398	33238973	NM_146403.1	Olfr1295	NP_666515.1	ILMN_1235813	001780136	S	667	GTCACTGTTAGCAAGAGCTCTAAAGCTGGAGCATCTAAGGCTTTGTCCAC	2	-	111404883-111404932	2qE3	Mus musculus olfactory receptor 1295 (Olfr1295), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR248-10	MOR248-10
Mus musculus	RefSeq	ILMN_223556	ILMN_223556	POLG	NM_017462.2	NM_017462.2		18975	87080814	NM_017462.2	Polg	NP_059490.2	ILMN_2765733	002710746	S	3857	CAGTGCCTCAGGAAGGAAGTGACCATGGACTGTAAAACTCCTTCTAACCC	7	-	86595405-86595454	7qD3	Mus musculus polymerase (DNA directed), gamma (Polg), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A DNA polymerase complex consisting of a large subunit, responsible for the catalytic activities, and a small accessory subunit. Functions in the replication and repair of mitochondrial DNA [goid 5760] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized in the mitochondrion [goid 6264] [evidence IMP]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence ISO]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IDA]	AA409516; PolgA	AA409516; PolgA
Mus musculus	RefSeq	ILMN_198051	ILMN_198051	LOC277278	XM_203725.3	XM_203725.3			38080983	XM_203725.3	LOC277278		ILMN_1248399	004880593	S	290	GCTCTGACAGCAAGGTGGATAATGAGGCACAGGTGAGACATCGCACACCG										
Mus musculus	Riken	ILMN_205515	ILMN_205515	D130050A01RIK	ri|D130050A01|PX00184I12|AK051458|1731					AK051458	D130050A01Rik		ILMN_1215837	001710730	S	1296	ATGATTCCCCAGCAACAGAGAGAAGGCTTCGTGAGCTTCGACAACCCGGC										
Mus musculus	RefSeq	ILMN_260140	ILMN_260140	OSR2	NM_054049.1	NM_054049.1		107587	17298683	NM_054049.1	Osr2	NP_473390.1	ILMN_2781784	004900168	S	1494	CTCTAGAAAGCCACACACTACCCCCTTCCAAACCAGCATGTGCTAGATCC	15	+	35247678-35247727	15qB3.1	Mus musculus odd-skipped related 2 (Drosophila) (Osr2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	5430409I15Rik	5430409I15Rik
Mus musculus	RefSeq	ILMN_184699	ILMN_310184	LOC100044314	XM_001471669.1	XM_001471669.1		100044314	149271890	XM_001471669.1	LOC100044314	XP_001471719.1	ILMN_2420817	007570132	S	1221	GAATTCATCAAACCTCCCGAGTAAGAAAGATGTGAGTAACGTGGCTTGAA					PREDICTED: Mus musculus hypothetical protein LOC100044314 (LOC100044314), mRNA.					
Mus musculus	RefSeq	ILMN_212983	ILMN_212983	SUMF1	NM_145937.2	NM_145937.2		58911	144094255	NM_145937.2	Sumf1	NP_666049.2	ILMN_2632276	000830164	S	2508	CCAGAGAGATACGAGAAATCTGGTTGATTTTGCGATATCAGATGCTTTGA	6	-	108057057-108057106	6qE1	Mus musculus sulfatase modifying factor 1 (Sumf1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI463102; AA543204; AI851573; FGE; MGC39076	AI463102; AA543204; AI851573; FGE; MGC39076
Mus musculus	Riken	ILMN_203154	ILMN_203154	6720458E07RIK	ri|6720458E07|PX00059J24|AK032823|3450					AK032823	6720458E07Rik		ILMN_2555140	003290711	S	2850	CCTGCCGGTCGTTCATGGGGAAGGGGACTGGATCAAATGTATAGGTCATT										
Mus musculus	MEEBO	ILMN_224051	ILMN_224051	OLFR1058	scl0258386.1_35				33239147	NM_146391	Olfr1058		ILMN_2773758	005290292	S	45	GGGCATCACTGCCTGCCCTGAACTGCAGCCTCCATTATTTGTACTTTTCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	MEEBO	ILMN_211381	ILMN_211381	2400010D15RIK	scl00001.1_0	NM_029623.1			28077062	NM_029623.1	2400010D15Rik		ILMN_2747331	004880630	S	1889	ATTCCGCTTCTTTGAACAGCGGAACCAGCGCCTGCGAGGGAACCCTAACT										
Mus musculus	Riken	ILMN_202666	ILMN_202666	UTRN	ri|A930021A21|PX00066L05|AK020881|885					AK020881	Utrn		ILMN_1229819	003940093	S	352	CGTTTACAAAGGATGGCAGTTTCCTCTCCGCGGTACCAGAAGCTCTGCAA						A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	The process whose specific outcome is the progression of the adult somatic muscle over time, from its formation to the mature structure [goid 7527] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_201955	ILMN_201955	2510002J07RIK	ri|0610009M19|R000002A16|AK002422|690					AK002422	2510002J07Rik		ILMN_1217252	006560296	S	402	GGGCTGGCCCACAAGACCACAAGGCACCTAGGAGTGCACAACACATTACC										
Mus musculus	RefSeq	ILMN_194928	ILMN_249460	ALCAM	NM_009655.1	NM_009655.1		11658	31791058	NM_009655.1	Alcam	NP_033785.1	ILMN_2606804	000510291	S	3830	ACATACTTTGACCTGAAGCTCAAAGGTGGCAGTTGTGAGATTGGGACACA	16	-	52251265-52251314	16qB5	Mus musculus activated leukocyte cell adhesion molecule (Alcam), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI853494; MuSC; MGC27910; BEN; CD166; DM-GRASP; SC1	AI853494; MuSC; MGC27910; BEN; CD166; DM-GRASP; SC1
Mus musculus	RefSeq	ILMN_216267	ILMN_216267	ARG2	NM_009705.1	NM_009705.1		11847	6753109	NM_009705.1	Arg2	NP_033835.1	ILMN_2669164	000670600	S	1129	ACTCTGGCACCTTTCACAACAGCATTACAGAGTTGCAAGGCATTCGAAGG	12	+	80257037-80257086	12qC3	Mus musculus arginase type II (Arg2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6525] [evidence IEA]	Catalysis of the reaction: L-arginine + H2O = L-ornithine + urea [goid 4053] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2 [goid 16813] [evidence IEA]	AU022422; AII	AU022422; AII
Mus musculus	RefSeq	Eef1a1	ILMN_254181	EEF1A1	NM_010106.2	NM_010106.2		13627	126032328	NM_010106.2	Eef1a1	NP_034236.2	ILMN_1377920	001690689	S	1340	GCAAGCCCATGTGTGTTGAGAGCTTCTCTGACTACCCTCCACTTGGTCGC	9	-	78326660-78326665:78326765-78326808	9qE1	Mus musculus eukaryotic translation elongation factor 1 alpha 1 (Eef1a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC8209; MGC7551; MGC18758; MGC118397; MGC8115; MGC102592; MGC103271; MGC27859	MGC8209; MGC7551; MGC18758; MGC118397; MGC8115; MGC102592; MGC103271; MGC27859
Mus musculus	RefSeq	Eef1a1	ILMN_254181	EEF1A1	NM_010106.2	NM_010106.2		13627	126032328	NM_010106.2	Eef1a1	NP_034236.2	ILMN_2588052	006280626	S	1374	CCCTCCACTTGGTCGCTTTGCTGTTCGTGACATGAGGCAGACAGTTGCTG	9	-	78326626-78326665:78326765-78326774	9qE1	Mus musculus eukaryotic translation elongation factor 1 alpha 1 (Eef1a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC8209; MGC7551; MGC18758; MGC118397; MGC8115; MGC102592; MGC103271; MGC27859	MGC8209; MGC7551; MGC18758; MGC118397; MGC8115; MGC102592; MGC103271; MGC27859
Mus musculus	RefSeq	ILMN_211653	ILMN_250444	OLFR50	NM_146946.1	NM_146946.1		18350	49170059	NM_146946.1	Olfr50	NP_667157.1	ILMN_1255688	005220433	S	637	TGCATCCTGGTTTCTTATGGCCACATAGGGGCCACTATCCTAAGAACTCC	2	+	36649394-36649443	2qB	Mus musculus olfactory receptor 50 (Olfr50), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC157535; MOR136-6; ID3	MGC157535; MOR136-6; ID3
Mus musculus	RefSeq	ILMN_211339	ILMN_211339	BACE2	NM_019517.3	NM_019517.3		56175	141803015	NM_019517.3	Bace2	NP_062390.2	ILMN_2614788	006520450	S	1055	GCATGCTGGACAAATTCTGAAACGCCATGGGCATATTTCCCTAAGATTTC	16	+	97643499-97643548	16qC4	Mus musculus beta-site APP-cleaving enzyme 2 (Bace2), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	ALP56; 1110059C24Rik; DRAP; AI850424; CEAP1; BAE2; CDA13; ASP21; AEPLC; ARP1	ALP56; 1110059C24Rik; DRAP; AI850424; CEAP1; BAE2; CDA13; ASP21; AEPLC; ARP1
Mus musculus	RefSeq	ILMN_211339	ILMN_211339	BACE2	NM_019517.3	NM_019517.3		56175	141803015	NM_019517.3	Bace2	NP_062390.2	ILMN_2738449	006420044	S	3595	GTGTCTACCTTTGTATCTCAGATGCTACTTGATGTGACATTTTGGTGGGA	16	+	97660512-97660561	16qC4	Mus musculus beta-site APP-cleaving enzyme 2 (Bace2), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	ALP56; 1110059C24Rik; DRAP; AI850424; CEAP1; BAE2; CDA13; ASP21; AEPLC; ARP1	ALP56; 1110059C24Rik; DRAP; AI850424; CEAP1; BAE2; CDA13; ASP21; AEPLC; ARP1
Mus musculus	RefSeq	ILMN_211339	ILMN_211339	BACE2	NM_019517.3	NM_019517.3		56175	141803015	NM_019517.3	Bace2	NP_062390.2	ILMN_2720083	003390221	S	1222	CTCCTCTTCCACAAATGCGCTGGTGATTGGTGCGACCGTGATGGAAGGCT	16	+	97646156-97646205	16qC4	Mus musculus beta-site APP-cleaving enzyme 2 (Bace2), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	ALP56; 1110059C24Rik; DRAP; AI850424; CEAP1; BAE2; CDA13; ASP21; AEPLC; ARP1	ALP56; 1110059C24Rik; DRAP; AI850424; CEAP1; BAE2; CDA13; ASP21; AEPLC; ARP1
Mus musculus	Riken	ILMN_205047	ILMN_205047	A830015L23RIK	ri|A830015L23|PX00154H13|AK043656|3328					AK043656	A830015L23Rik		ILMN_1246510	005270168	S	3002	CAATAGCTGGGCCACTCCTGAACCTACACATGGCTAACATACTCCCCTCC										
Mus musculus	MEEBO	ILMN_219753	ILMN_219753	C330023D02RIK	scl0319899.2_76	NM_177030.2			31342634	NM_177030.2	C330023D02Rik		ILMN_2713226	000580195	S	929	CCTACTGTATACTTCTCTATTTAATCAACCAATGTGCTGCCGACCTGCCT										
Mus musculus	Riken	ILMN_206995	ILMN_206995	6430567L13RIK	ri|6430567L13|PX00648D24|AK078283|1193					AK078283	6430567L13Rik		ILMN_1241541	007200228	S	672	CCCACCACTCAAATAGTAGGTCTGGAGAACATGTCTAGGCACCTCCCTCA										
Mus musculus	Riken	ILMN_201856	ILMN_201856	2210019E14RIK	ri|6330408J23|PX00008C08|AK018145|1155					AK018145	2210019E14Rik		ILMN_1248831	004120201	S	870	ACTCAAGTGGACAAGCAAAGGCCCATGGGGGAATCTGAGCCTCACTCAGC										
Mus musculus	RefSeq	ILMN_196943	ILMN_196943	LOC227379	XM_129947.4	XM_129947.4			38050356	XM_129947.4	LOC227379		ILMN_1225110	000580167	S	234	GGCTGGGAGTGCAAATAGTTGGTCCTCCTTGACGTCACAACACATGGCGC										
Mus musculus	RefSeq	ILMN_215767	ILMN_215767	NR1H3	NM_013839.3	NM_013839.3		22259	142374866	NM_013839.3	Nr1h3	NP_038867.2	ILMN_2668472	005720438	S	395	CGGAGTTGTGGAAGACAGAACCTCAAGATGCAGGAGACCAGGGAGGCAAC	2	-	91032840-91032889	2qE1	Mus musculus nuclear receptor subfamily 1, group H, member 3 (Nr1h3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IMP]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with ecdysteroid hormone to initiate a change in cell activity [goid 4884] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]	LXR; AU018371; Unr1; RLD1	LXR; AU018371; Unr1; RLD1
Mus musculus	RefSeq	ILMN_215767	ILMN_215767	NR1H3	NM_013839.3	NM_013839.3		22259	142374866	NM_013839.3	Nr1h3	NP_038867.2	ILMN_2663374	004900630	S	1668	TGTCCACGAGTGACTGTTTCACCGTGTCCTTTGTGTTGGCCACATGGCGA	2	-	91024455-91024492:91024493-91024504	2qE1	Mus musculus nuclear receptor subfamily 1, group H, member 3 (Nr1h3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IMP]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with ecdysteroid hormone to initiate a change in cell activity [goid 4884] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]	LXR; AU018371; Unr1; RLD1	LXR; AU018371; Unr1; RLD1
Mus musculus	RefSeq	ILMN_231986	ILMN_231986	TTC21A	NM_028735.1	NM_028735.1		74052	58037342	NM_028735.1	Ttc21a	NP_083011.1	ILMN_2916607	000990433	S	4062	CCCTAGCTGTGGCTGGAAGGGGCTTGGGCAGGGAGAAGCATCAGTCTATA	9	+	119816371-119816372:119816373-119816420	9qF4	Mus musculus tetratricopeptide repeat domain 21A (Ttc21a), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Thm2; AA387572; 4921538N17Rik	Thm2; AA387572; 4921538N17Rik
Mus musculus	RefSeq	ILMN_244985	ILMN_244985	OLFR533	NM_001011815.1	NM_001011815.1		258056	58801395	NM_001011815.1	Olfr533	NP_001011815.1	ILMN_3160847	000770037	S	756	CACAGTTCTTTATACTTATGTCCGGCCAGCCCTAGGAACTGCTGGGTTCC	7	+	147652857-147652906	7qF4	Mus musculus olfactory receptor 533 (Olfr533), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR252-3P	MOR252-3P
Mus musculus	RefSeq	ILMN_248700	ILMN_248700	C1QL4	NM_001024702.1	NM_001024702.1		239659	71725390	NM_001024702.1	C1ql4	NP_001019873.1	ILMN_2867212	006660274	S	332	CCTTCTACGCGGGTCTAAGGCGGCCTCACGAGGGTTATGAAGTGTTGCGC	15	-	98917778-98917827	15qF1	Mus musculus complement component 1, q subcomponent-like 4 (C1ql4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			C1qtnf11	C1qtnf11
Mus musculus	RefSeq	ILMN_217617	ILMN_217617	GJE1	NM_080450.4	NM_080450.4		118446	146149129	NM_080450.4	Gje1	NP_536698.2	ILMN_2685506	006620475	S	3154	TTACTTGTTTTTCTTTTGGCTTTTGTGAATTTGGTGCTACATTTAAGAGA				5qG2	Mus musculus gap junction membrane channel protein epsilon 1 (Gje1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]		Cx29	Cx29
Mus musculus	RefSeq	ILMN_216420	ILMN_216420	SULT1B1	NM_019878.4	NM_019878.4		56362	146135068	NM_019878.4	Sult1b1	NP_063931.1	ILMN_2685353	004490184	S	2353	ACCCACAATCTGATACAACCTCAAGTTATAGGAAAAAATAATAAGCATCT				5qE1	Mus musculus sulfotransferase family 1B, member 1 (Sult1b1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IDA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence ISS]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216420	ILMN_216420	SULT1B1	NM_019878.4	NM_019878.4		56362	146135068	NM_019878.4	Sult1b1	NP_063931.1	ILMN_2670929	002000193	S	1168	CCTTAGTTTTCAAAGGATATGTCTTCAGATTTCTAGATTCTTACTGAGTT				5qE1	Mus musculus sulfotransferase family 1B, member 1 (Sult1b1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IDA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence ISS]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209446	ILMN_209446	DEF6	NM_027185.2	NM_027185.2		23853	142375804	NM_027185.2	Def6	NP_081461.1	ILMN_2595842	004810543	S	1828	CCTCAATGGTGGAGATGAGACTCCCATCCTAGCTTTGGCCTCTCAGGAAG	17	+	28356853-28356902	17qA3.3	Mus musculus differentially expressed in FDCP 6 (Def6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			IBP; 2410003F05Rik; 6430538D02Rik; Slat; AV094905; Slat6; SLAT2	IBP; 2410003F05Rik; 6430538D02Rik; Slat; AV094905; Slat6; SLAT2
Mus musculus	RefSeq	ILMN_197894	ILMN_313015	LOC671064	XR_031571.1	XR_031571.1		671064	149252583	XR_031571.1	LOC671064		ILMN_1225869	002650632	S	770	GGGACACTTACAACCCTGTACCTGGAGTTATTCATGGAATCCCCTCACCT	4	+	69708991-69709040	4qC2	PREDICTED: Mus musculus similar to 3-hydroxyisobutyrate dehydrogenase (LOC671064), misc RNA.					
Mus musculus	RefSeq	ILMN_198691	ILMN_233218	LOC674666	XM_976265.1	XM_976265.1		674666	94380625	XM_976265.1	LOC674666	XP_981359.1	ILMN_2532582	001070561	S	126	CATGGAGCCCGTTGGCACAATAATGGAGTACTGTGACACCACAGTGGAGC					PREDICTED: Mus musculus hypothetical protein LOC674666 (LOC674666), mRNA.					
Mus musculus	MEEBO	ILMN_195963	ILMN_195963	NBEA	scl026422.1_17						Nbea		ILMN_2520326	005700673	S	10	CCTTGTGCCCAGTTGTTACAAAGTTTAAGCTTTGAACCTAACCTGCATCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence NAS]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISS]; The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles [goid 6892] [evidence NAS]	Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence NAS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212589	ILMN_212589	TSEN34	NM_024168.1	NM_024168.1		66078	13195595	NM_024168.1	Tsen34	NP_077130.1	ILMN_2628175	002810255	S	1018	CTCTTCAATGGTCGCCCCAGCTCATCTCTGCACGGAGGCTTGCACTCTCC	7	+	3652357-3652406	7qA1	Mus musculus tRNA splicing endonuclease 34 homolog (S. cerevisiae) (Tsen34), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex that catalyzes the endonucleolytic cleavage of pre-tRNA, producing 5'-hydroxyl and 2',3'-cyclic phosphate termini, and specifically removing the intron [goid 214] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Splicing of tRNA substrates via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons [goid 6388] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of pre-tRNA, producing 5'-hydroxyl and 2',3'-cyclic phosphate termini, and specifically removing the intron [goid 213] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	0610027F08Rik; Leng5	0610027F08Rik; Leng5
Mus musculus	MEEBO	ILMN_187211	ILMN_187211	SNRPG	scl29806.1_289				13385993	NM_026506	Snrpg		ILMN_2442140	007570767	S	8	CGGTCGAGGTGCATGGTTGTGAGGAACCGGAGACTCGTGGGCTTAAAATG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	Riken	ILMN_203878	ILMN_203878	A630055A13RIK	ri|A630055A13|PX00146D18|AK042059|2077					AK042059	A630055A13Rik		ILMN_1250340	001190739	S	1528	GTTCATTTCTGAGTTTGACAGCACCGAGTAGGATGTGTGATATAGTCCTC										
Mus musculus	RefSeq	ILMN_248478	ILMN_248478	GCAP14	NM_028407.3	NM_028407.3		72972	80861475	NM_028407.3	Gcap14	NP_082683.2	ILMN_3130768	005870639	A	5330	AAAGCTGCCCCTTTCTTCCTGGTAGAGCATTGCCACGATGAGCCAGGCTG	14	-	37688324-37688373	14qB	Mus musculus granule cell antiserum positive 14 (Gcap14), transcript variant 2, mRNA.				2900054P12Rik; AW108503; AI035535; 1700012P13Rik	2900054P12Rik; AW108503; AI035535; 1700012P13Rik
Mus musculus	RefSeq	ILMN_220155	ILMN_220155	MCF2	NM_133197.2	NM_133197.2		109904	142372813	NM_133197.2	Mcf2	NP_573460.1	ILMN_2718312	007570397	S	3478	TCATGCTTGTTTCTTTTTCTGGATTTATGCTTATAATTCATGTAGCAAAT	X	-	57309219-57309268	XqA6	Mus musculus mcf.2 transforming sequence (Mcf2), mRNA.		The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC159138; B230117G22Rik; Mcf-2; Dbl	MGC159138; B230117G22Rik; Mcf-2; Dbl
Mus musculus	MEEBO	ILMN_213454	ILMN_213454	BC023151	scl31900.13.1_14				47059094	NM_145387	BC023151		ILMN_2637187	002480762	S	2253	CATCCCCAACCTCACAACCTCTTAGTCTGGATCCAGCCCTGAAGCAGTAA										
Mus musculus	RefSeq	ILMN_186024	ILMN_255959	PALLD	XM_974900.1	XM_974900.1		72333	94383582	XM_974900.1	Palld	XP_979994.1	ILMN_1218247	000770465	S	4474	AAACTGAACGCCAGCGCTTCCACCAGCCTACTCCTCTGTCGCATTATGGG	8	-	64405421-64405470	8qB3.1	PREDICTED: Mus musculus palladin, cytoskeletal associated protein, transcript variant 6 (Palld), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence ISS]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]		
Mus musculus	RefSeq	ILMN_209957	ILMN_209957	PDZD11	NM_028303.1	NM_028303.1		72621	21312243	NM_028303.1	Pdzd11	NP_082579.1	ILMN_2972646	001500368	S	527	TAGAGACTTGCAGCCCACAGCCTTCCGTGTGGGATCTGCCAGGACAAGCT	X	-	96826063-96826111:96826112-96826112	XqC3	Mus musculus PDZ domain containing 11 (Pdzd11), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI854765; 2310079D11Rik; Pdzk11; 1810012H22Rik; 2700099C19Rik	AI854765; 2310079D11Rik; Pdzk11; 1810012H22Rik; 2700099C19Rik
Mus musculus	RefSeq	ILMN_209957	ILMN_209957	PDZD11	NM_028303.1	NM_028303.1		72621	21312243	NM_028303.1	Pdzd11	NP_082579.1	ILMN_2972645	000160184	S	624	CACCGTCCTGGTTTAGTGGATGGGGAGGATGGGGTGACGGCTTACCAGCT	X	-	96825966-96826015	XqC3	Mus musculus PDZ domain containing 11 (Pdzd11), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI854765; 2310079D11Rik; Pdzk11; 1810012H22Rik; 2700099C19Rik	AI854765; 2310079D11Rik; Pdzk11; 1810012H22Rik; 2700099C19Rik
Mus musculus	RefSeq	ILMN_196463	ILMN_196463	1110003E08RIK	XM_284098.2	XM_284098.2			38080254	XM_284098.2	1110003E08Rik		ILMN_1254426	005890408	S	692	CTTCCTGCCGTCCTCATTTGAGTGGTTTCTTGGGACTGCATTGATGAGGC										
Mus musculus	Riken	ILMN_204769	ILMN_204769	B930062B16RIK	ri|B930062B16|PX00164P13|AK047433|1736					AK047433	B930062B16Rik		ILMN_1220808	000110152	S	1258	GGCCAGCGTGGAAAGAAGTCAGAGCAAAAACTCAAGGCAGTTTCCTGGGA										
Mus musculus	RefSeq	ILMN_210026	ILMN_210026	A130092J06RIK	NM_175511.4	NM_175511.4		241303	146198626	NM_175511.4	A130092J06Rik	NP_780720.1	ILMN_2601453	000770669	S	3896	CTGTGAACACGAACCCATGCGTGCACTTACCAGCAGGCGCGAGACTCTTG				2qB	Mus musculus RIKEN cDNA A130092J06 gene (A130092J06Rik), mRNA.				RP23-55I14.8	RP23-55I14.8
Mus musculus	RefSeq	ILMN_236982	ILMN_236982	DUB2A	NM_001001559.2	NM_001001559.2		384701	112983633	NM_001001559.2	Dub2a	NP_001001559.2	ILMN_2878227	005890753	S	1441	CACCTGCCCAGATCCATAGCAAATTGGGGCAGGGATACTCCAGACAAGGT	7	-	110398747-110398796	7qE3	Mus musculus deubiquitinating enzyme 2a (Dub2a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Dub4	Dub4
Mus musculus	RefSeq	ILMN_220726	ILMN_220726	FAM19A4	NM_177233.5	NM_177233.5		320701	118130359	NM_177233.5	Fam19a4	NP_796207.2	ILMN_2725882	003290731	S	1727	GACAGTTGACGCAAGCCTAACAGAGTCCCTTCTGTACCCGTTTGTTCGGT	6	-	96781608-96781657	6qD3	Mus musculus family with sequence similarity 19, member A4 (Fam19a4), mRNA.				Fam19a4 Tafa-4; MGC107151; Tafa-4	Fam19a4 Tafa-4; MGC107151; Tafa-4
Mus musculus	RefSeq	ILMN_243101	ILMN_243101	OLFR1000	NM_001011695.1	NM_001011695.1		257899	58743311	NM_001011695.1	Olfr1000	NP_001011695.1	ILMN_3160718	003060703	S	745	GCTATCCTGTATGGGACTCTTTTCTTCATCTATGTTCGACCCAATGCCAG	2	-	85448271-85448320	2qD	Mus musculus olfactory receptor 1000 (Olfr1000), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR175-9	MOR175-9
Mus musculus	RefSeq	ILMN_253453	ILMN_253453	USP30	NM_001033202.3	NM_001033202.3		100756	146198556	NM_001033202.3	Usp30	NP_001028374.1	ILMN_3161250	000430754	S	2425	CTTCCTGTTAGTAGTTGCCCACGACAGGGTTTACAGGCCAGAACCTGGGC				5qF	Mus musculus ubiquitin specific peptidase 30 (Usp30), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AI851327; 6330590F17Rik; D5Ertd483e	AI851327; 6330590F17Rik; D5Ertd483e
Mus musculus	MEEBO	ILMN_224066	ILMN_224066	MRG1	scl18838.17_213				31981614	NM_010825	Mrg1		ILMN_2774121	004900154	S	2731	CAGCACGTGTTCCTCACTAGAAGAAAATGCTGTTACCTTTAAGCTTTGTC										
Mus musculus	RefSeq	ILMN_197310	ILMN_319077	LOC667582	XR_033257.1	XR_033257.1		667582	149264574	XR_033257.1	LOC667582		ILMN_1251483	004070739	S	594	ATGGATCACACTGTTGTGCTGCAGCTGGCCGAGGAATACCTGCTGAAGGA				13qD1	PREDICTED: Mus musculus similar to EAP30 subunit of ELL complex (LOC667582), misc RNA.					
Mus musculus	RefSeq	ILMN_217753	ILMN_217753	D230014K01RIK	NM_172573.1	NM_172573.1		217364	27369815	NM_172573.1	D230014K01Rik	NP_766161.1	ILMN_2687121	006980647	S	3727	CTCACAGTCTGGTGAGCAAGCAATTAGAAGGAAGGGGGCTTAGCGGAGCC	11	+	118350315-118350364	11qE2	Mus musculus RIKEN cDNA D230014K01 gene (D230014K01Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: endohydrolysis of the N,N'-diacetylchitobiosyl unit in high-mannose glycopeptides and glycoproteins containing the -[Man(GlcNAc)2]Asn-structure. One N-acetyl-D-glucosamine residue remains attached to the protein; the rest of the oligosaccharide is released intact [goid 33925] [evidence IEA]	C130099A03; RP23-159O6.3	C130099A03; RP23-159O6.3
Mus musculus	RefSeq	ILMN_259444	ILMN_259444	PACSIN1	NM_178365.1	NM_178365.1		23969	46559411	NM_178365.1	Pacsin1	NP_848142.1	ILMN_3153080	002190241	A	1361	AGTGGTCAGACGATGAGAGCGGAAACCCCTTCGGGGGCAATGAGGCCAAT	17	+	27435508-27435557	17qA3.3	Mus musculus protein kinase C and casein kinase substrate in neurons 1 (Pacsin1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]	A830061D09Rik; H74; syndapin; mKIAA1379	A830061D09Rik; H74; syndapin; mKIAA1379
Mus musculus	RefSeq	ILMN_259444	ILMN_259444	PACSIN1	NM_178365.1	NM_178365.1		23969	46559411	NM_178365.1	Pacsin1	NP_848142.1	ILMN_3074180	002760653	I	1	GAGAGCGCGCCGGAGGGGACCCCGAGAACCGAGCCCCAATCCAGACGCCA	17	+	27412843-27412892	17qA3.3	Mus musculus protein kinase C and casein kinase substrate in neurons 1 (Pacsin1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]	A830061D09Rik; H74; syndapin; mKIAA1379	A830061D09Rik; H74; syndapin; mKIAA1379
Mus musculus	RefSeq	ILMN_210539	ILMN_312545	LOC100045680	XM_001475152.1	XM_001475152.1		100045680	149269272	XM_001475152.1	LOC100045680	XP_001475202.1	ILMN_1246898	006510113	S	1790	GGATGGTGCCAAGGAGTATCGTAATGCGGACATGATGAAGCTCCGAATTC					PREDICTED: Mus musculus similar to complement C4 (LOC100045680), mRNA.					
Mus musculus	RefSeq	ILMN_210539	ILMN_312545	LOC100045680	XM_001475152.1	XM_001475152.1		100045680	149269272	XM_001475152.1	LOC100045680	XP_001475202.1	ILMN_2606624	001010632	S	4270	CAGGCGCTGTGGAATACGCATGGGATGCCAATGAAGACTACGAAGACTAC					PREDICTED: Mus musculus similar to complement C4 (LOC100045680), mRNA.					
Mus musculus	RefSeq	ILMN_210652	ILMN_210652	1700010M22RIK	NM_025490.2	NM_025490.2		66328	125988384	NM_025490.2	1700010M22Rik	NP_079766.3	ILMN_1245353	002630646	S	697	GTGTACCTTTGCTGGGATCCGGAATAGTAAAAAGTGTTGGAGTGCAACAC	2	+	144650098-144650147	2qG1	Mus musculus RIKEN cDNA 1700010M22 gene (1700010M22Rik), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	 [goid 5498] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	RP23-281P6.1	RP23-281P6.1
Mus musculus	RefSeq	ILMN_222538	ILMN_222538	CEP68	NM_172260.3	NM_172260.3		216543	142378303	NM_172260.3	Cep68	NP_758464.2	ILMN_2751090	003710750	S	2891	TGCATGCTTGTGCTAACCTCTGGGGATCTCAGGCCACAGTTCTCTTCCCC	11	-	20128909-20128958	11qA3.1	Mus musculus centrosomal protein 68 (Cep68), mRNA.				6030463E10Rik; MGC6990; Kiaa0582; RP23-19L22.5; BC027174; AI481761	6030463E10Rik; MGC6990; Kiaa0582; RP23-19L22.5; BC027174; AI481761
Mus musculus	Riken	ILMN_203292	ILMN_203292	ASK-PENDING	ri|4432409B02|PX00011O03|AK014480|2338					AK014480	Ask-pending		ILMN_2556182	003850437	S	1610	GATGATGGCCTAGACTAAGCAGGAATAGGAGTTCTTTGGGCATGGTCAGG										
Mus musculus	RefSeq	ILMN_208814	ILMN_208814	STAT3	NM_011486.4	NM_011486.4		20848	76253924	NM_011486.4	Stat3	NP_035616.1	ILMN_3096144	006580553	A	3477	CCCTGCCTCAGGACCTTGTGTCGAGAGGGATTGCCTTACAGGTTTGAACC	11	-	100756119-100756159:100756378-100756386	11qD	Mus musculus signal transducer and activator of transcription 3 (Stat3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a photoreceptor cell, as found in the eye, the primary visual organ of most organisms [goid 1754] [evidence IMP]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence NAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	AW109958; 1110034C02Rik; Aprf	AW109958; 1110034C02Rik; Aprf
Mus musculus	MEEBO	ILMN_186159	ILMN_186159	IGHV12S1_M22439_IG_HEAVY_VARIABLE_12S1_339	IGHV12S1_M22439_Ig_heavy_variable_12S1_339						IGHV12S1_M22439_Ig_heavy_variable_12S1_339		ILMN_2433110	006520711	S	20	AGACTATGATGGTTACTGGTACTTCGATGTCTGGGGCACAGGGACCACGG										
Mus musculus	RefSeq	ILMN_247952	ILMN_247952	NPCD	NM_001013362.2	NM_001013362.2		504193	113374170	NM_001013362.2	Npcd	NP_001013380.2	ILMN_3069033	006020022	I	373	GGGCCCAGGCGGAGGCCCTCCGCATCAGTGATGTGCATTTCTCTGTCAAG	15	-	79659354-79659403	15qE1	Mus musculus neuronal pentraxin with chromo domain (Npcd), transcript variant 2, mRNA.					
Mus musculus	RefSeq	ILMN_213680	ILMN_247952	NPCD	NM_001013362.2	NM_001013362.2		504193	113374170	NM_001013362.2	Npcd	NP_001013380.2	ILMN_2639597	001090703	S	1356	ATTGCACAGTTCAACCTGTGGGACCACGCTCTGACACCGGCCCAGGTGCT	15	-	79620248-79620297	15qE1	Mus musculus neuronal pentraxin with chromo domain (Npcd), transcript variant 2, mRNA.					
Mus musculus	RefSeq	ILMN_247952	ILMN_247952	NPCD	NM_001013362.2	NM_001013362.2		504193	113374170	NM_001013362.2	Npcd	NP_001013380.2	ILMN_3147433	004280692	A	3167	TGCAGAGGCTTCACCCAGAACCTGCTGAGATCCCGGTTGCCCAGTAACAA	15	-	79618437-79618486	15qE1	Mus musculus neuronal pentraxin with chromo domain (Npcd), transcript variant 2, mRNA.					
Mus musculus	Riken	ILMN_202266	ILMN_202266	1700017B05RIK	ri|1700017B05|ZX00050B23|AK006055|1024					AK006055	1700017B05Rik		ILMN_1240053	004480242	S	281	GCCAGGACTCCTGCAATTACAAAGGTGGCTTTGACACTGAGGCCAGAACT										
Mus musculus	RefSeq	ILMN_196814	ILMN_196814	LOC237387	XM_137177.1	XM_137177.1			20862838	XM_137177.1	LOC237387		ILMN_1248047	005960753	S	500	TGGATGAAATTGCCTGCCACACCTCAGCGCAGGAGCAGTTTGTGGGCAAG										
Mus musculus	RefSeq	ILMN_199368	ILMN_199368	MLZE	NM_031378.1	NM_031378.1			13878198	NM_031378.1	Mlze		ILMN_2730216	007100093	S	432	GGCTGACCTGGATGTCGAAACCATTGCAGGAGGAGAAGCAGGGTTTGTTA										
Mus musculus	MEEBO	ILMN_215926	ILMN_215926	DIXDC1	scl0330938.1_96				46559409	NM_178118	Dixdc1		ILMN_2665301	004830056	S	5416	ACTCATCCGTATCATGACTGCACAGTCTTATTTGTCAAACTTGAGAGGTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191662	ILMN_253463	HRAS1	NM_008284.1	NM_008284.1		15461	6680270	NM_008284.1	Hras1	NP_032310.1	ILMN_1223624	000870209	S	377	AGTCTCGGCAGGCCCAGGACCTTGCTCGCAGCTATGGCATCCCCTACATT	7	-	148378053-148378102	7qF5	Mus musculus Harvey rat sarcoma virus oncogene 1 (Hras1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IPI]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence TAS]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	c-Ha-ras; H-ras; c-rasHa; Harvey-ras; Ha-ras; c-H-ras; ras; Hras-1; Kras2	c-Ha-ras; H-ras; c-rasHa; Harvey-ras; Ha-ras; c-H-ras; ras; Hras-1; Kras2
Mus musculus	Riken	ILMN_205419	ILMN_205419	E230014G11RIK	ri|E230014G11|PX00209N06|AK054043|743					AK054043	E230014G11Rik		ILMN_1241436	001300661	S	490	GGCCCAGTCCTGAGGGGGTGTGAAATCCCATATTGAGGTGCGTGACGTGA										
Mus musculus	RefSeq	ILMN_214618	ILMN_318141	LOC100046918	XM_001477065.1	XM_001477065.1		100046918	149233729	XM_001477065.1	LOC100046918	XP_001477115.1	ILMN_2699167	002510519	S	187	ATGATTCCCTAGCACCCATTACTCTAAATACTATCACTGCAGCTGGACGT					PREDICTED: Mus musculus similar to Electron transferring flavoprotein, alpha polypeptide (LOC100046918), mRNA.					
Mus musculus	Riken	ILMN_205482	ILMN_205482	D030036O12RIK	ri|D030036O12|PX00180E11|AK050925|1157					AK050925	D030036O12Rik		ILMN_1258105	002360767	S	822	CTTCTTTCTTCTATAGCTTGAGACTGGGCCATATGCTGCGAGCTGGTGGG										
Mus musculus	RefSeq	ILMN_222781	ILMN_258530	LOC639931	XM_916567.2	XM_916567.2		639931	94392761	XM_916567.2	LOC639931	XP_921660.1	ILMN_2754636	003170220	S	861	GCGTAACTGTCGGGTAAACTGTAATATGGCGTAACTGTCGGGTAAACGGC					PREDICTED: Mus musculus similar to zinc RING finger protein SAG (LOC639931), mRNA.					
Mus musculus	RefSeq	ILMN_260916	ILMN_260916	GM732	NM_001033252.1	NM_001033252.1		213450	85701757	NM_001033252.1	Gm732	NP_001028424.1	ILMN_3022025	000940711	I	1410	ACAATAGAGTCAGCATATGCCAGTATCATGCAAACCCCTTCAAGCCTGCC	X	-	104148655-104148704	XqD	Mus musculus gene model 732, (NCBI) (Gm732), mRNA.				RP23-18K13.2	RP23-18K13.2
Mus musculus	RefSeq	ILMN_260916	ILMN_260916	GM732	NM_001033252.1	NM_001033252.1		213450	85701757	NM_001033252.1	Gm732	NP_001028424.1	ILMN_3094365	003360373	A	1574	CCGGGTTCGTCGTAAAGCGATGGGGTATCATTCAGAAAAATCGGATAGCG	X	-	104148491-104148540	XqD	Mus musculus gene model 732, (NCBI) (Gm732), mRNA.				RP23-18K13.2	RP23-18K13.2
Mus musculus	RefSeq	ILMN_216028	ILMN_216028	RUVBL1	NM_019685.2	NM_019685.2		56505	134053923	NM_019685.2	Ruvbl1	NP_062659.1	ILMN_1228999	006110369	S	369	CAGTAAAGTCCCTTTCTGCCCGATGGTGGGTAGCGAGGTATACTCAACTG	6	+	88423106-88423155	6qD1	Mus musculus RuvB-like protein 1 (Ruvbl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Tip49a; 2510009G06Rik; Pontin52	Tip49a; 2510009G06Rik; Pontin52
Mus musculus	RefSeq	ILMN_216028	ILMN_216028	RUVBL1	NM_019685.2	NM_019685.2		56505	134053923	NM_019685.2	Ruvbl1	NP_062659.1	ILMN_2666487	006980156	S	1314	GAGGTATTCGGTGCAGCTGCTGACCCCAGCCAACCTGCTGGCAAAGATCA	6	+	88446491-88446493:88447222-88447268	6qD1	Mus musculus RuvB-like protein 1 (Ruvbl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Tip49a; 2510009G06Rik; Pontin52	Tip49a; 2510009G06Rik; Pontin52
Mus musculus	RefSeq	ILMN_220225	ILMN_220225	DUSP13	NM_013849.3	NM_013849.3		27389	56118224	NM_013849.3	Dusp13	NP_038877.2	ILMN_2719386	004920538	S	734	GAGATATCTGTCCCAACTCAGGCTTCCTCCGACAGCTCCAGGTTCTGGAC	14	-	22552903-22552952	14qA3	Mus musculus dual specificity phosphatase 13 (Dusp13), transcript variant 2, mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]	LMW-DSP6; MDSP; Gm1203; TMDP; TS-DSP6	LMW-DSP6; MDSP; Gm1203; TMDP; TS-DSP6
Mus musculus	RefSeq	ILMN_220225	ILMN_220225	DUSP13	NM_013849.3	NM_013849.3		27389	56118224	NM_013849.3	Dusp13	NP_038877.2	ILMN_3077281	000730332	I	88	CAGACACCTCGATGTCCTTCTGTGAGAACGCTAGCCCCACTTGGTCTGTG	14	-	22561964-22562013	14qA3	Mus musculus dual specificity phosphatase 13 (Dusp13), transcript variant 2, mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]	LMW-DSP6; MDSP; Gm1203; TMDP; TS-DSP6	LMW-DSP6; MDSP; Gm1203; TMDP; TS-DSP6
Mus musculus	RefSeq	ILMN_220225	ILMN_220225	DUSP13	NM_013849.3	NM_013849.3		27389	56118224	NM_013849.3	Dusp13	NP_038877.2	ILMN_3156236	006280202	A	786	CAGGCTGAGGCGGGAAACAGGAAGACTCTGAATTAGGGAGCACCTGAGGC	14	-	22552851-22552870:22552871-22552900	14qA3	Mus musculus dual specificity phosphatase 13 (Dusp13), transcript variant 2, mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]	LMW-DSP6; MDSP; Gm1203; TMDP; TS-DSP6	LMW-DSP6; MDSP; Gm1203; TMDP; TS-DSP6
Mus musculus	RefSeq	ILMN_215712	ILMN_215712	NEU2	NM_015750.2	NM_015750.2		23956	142361584	NM_015750.2	Neu2	NP_056565.1	ILMN_2662728	006280672	S	1478	CTGCATGTCGGTTGTCACTATGCTAGTTTAACCTGCCTGTTTCCCCATGC	1	+	89494310-89494359	1qD	Mus musculus neuraminidase 2 (Neu2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates [goid 4308] [evidence IEA]	MTS; MSS; MBS	MTS; MSS; MBS
Mus musculus	MEEBO	ILMN_190054	ILMN_190054	4930403C10RIK	scl32666.6.1_115						4930403C10Rik		ILMN_1242506	007160692	S	16	GTGGGGCAACCCCACGACAGAGAAGACATAGATAAAGTTGAGTCCAGGAG										
Mus musculus	RefSeq	ILMN_225483	ILMN_225483	OLFR1129	NM_001011836.1	NM_001011836.1		258111	60115718	NM_001011836.1	Olfr1129	NP_001011836.1	ILMN_2924342	006100326	S	381	CCGCTATGTGGCCATCTGTAACCCTCTGCACTATCCTTTGGTCATGAACC	2	+	87415623-87415672	2qD	Mus musculus olfactory receptor 1129 (Olfr1129), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR264-9P; MOR264-23	MOR264-9P; MOR264-23
Mus musculus	RefSeq	ILMN_188451	ILMN_317739	LOC100045502	XM_001474412.1	XM_001474412.1		100045502	149258709	XM_001474412.1	LOC100045502	XP_001474462.1	ILMN_1221999	002450128	S	506	GCTGGTTTGCTGGCTTCTGCCTGGTGCTAGGAGGGTGTGTGCTTCACTGT					PREDICTED: Mus musculus similar to Skullin (LOC100045502), mRNA.					
Mus musculus	RefSeq	ILMN_215744	ILMN_215744	D10ERTD641E	NM_025514.2	NM_025514.2		52717	118130312	NM_025514.2	D10Ertd641e	NP_079790.1	ILMN_1219088	002230324	S	1259	CCCCGAAGTCTTAGTCCGGCTTACAGGGTATGAAAGCAGTTCTGTGGCAA	10	-	59450677-59450726	10qB4	Mus musculus DNA segment, Chr 10, ERATO Doi 641, expressed (D10Ertd641e), mRNA.				2310005G07Rik	2310005G07Rik
Mus musculus	RefSeq	ILMN_196164	ILMN_320438	LOC100044698	XM_001472759.1	XM_001472759.1		100044698	149268382	XM_001472759.1	LOC100044698	XP_001472809.1	ILMN_1230303	006520400	S	281	ACCTGCTGGTCGTCGGGCGCGCTGGTGCAGTGGCCGCTTCTTGGCAGGCA					PREDICTED: Mus musculus similar to Unknown (protein for MGC:117841) (LOC100044698), mRNA.					
Mus musculus	RefSeq	ILMN_190114	ILMN_190114	TUBA3A	NM_009446.2	NM_009446.2		22144	114431225	NM_009446.2	Tuba3a	NP_033472.1	ILMN_1220219	003190280	S	1114	CCGACTGGATTTAAGGTGGGTATTAACTACCAGCCTCCCACTGTGGTCCC	6	-	125228637-125228672:125230988-125231001	6qF3	Mus musculus tubulin, alpha 3A (Tuba3a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	M[a]3; AI528779; Tuba3; MGC107295	M[a]3; AI528779; Tuba3; MGC107295
Mus musculus	RefSeq	ILMN_190114	ILMN_190114	TUBA3A	NM_009446.2	NM_009446.2		22144	114431225	NM_009446.2	Tuba3a	NP_033472.1	ILMN_2491565	004180743	S	385	AGAGGCCACTACACCATCGGCAAAGAGATTGTCGACCTGGTCCTGGATCG	6	-	125232383-125232432	6qF3	Mus musculus tubulin, alpha 3A (Tuba3a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	M[a]3; AI528779; Tuba3; MGC107295	M[a]3; AI528779; Tuba3; MGC107295
Mus musculus	RefSeq	ILMN_190114	ILMN_190114	TUBA3A	NM_009446.2	NM_009446.2		22144	114431225	NM_009446.2	Tuba3a	NP_033472.1	ILMN_2505467	003310414	S	1269	CGCCAAGCGAGCCTTTGTGCATTGGTACGTGGGAGAAGGCATGGAGGAAG	6	-	125228482-125228531	6qF3	Mus musculus tubulin, alpha 3A (Tuba3a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	M[a]3; AI528779; Tuba3; MGC107295	M[a]3; AI528779; Tuba3; MGC107295
Mus musculus	RefSeq	ILMN_190114	ILMN_190114	TUBA3A	NM_009446.2	NM_009446.2		22144	114431225	NM_009446.2	Tuba3a	NP_033472.1	ILMN_2467287	006270136	S	411	GATTGTCGACCTGGTCCTGGATCGAATCCGAAAGCTGGCCGATCTGTGCA	6	-	125231655-125231668:125232371-125232406	6qF3	Mus musculus tubulin, alpha 3A (Tuba3a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	M[a]3; AI528779; Tuba3; MGC107295	M[a]3; AI528779; Tuba3; MGC107295
Mus musculus	RefSeq	ILMN_211900	ILMN_211900	NEXN	NM_199465.1	NM_199465.1		68810	41054993	NM_199465.1	Nexn	NP_955759.1	ILMN_2669215	007330022	S	2442	TTGGGTGGTTTTATATTTAATTTTCTGGGAAACGTGTTGTGAAATCAAAA	3	-	151899967-151900016	3qH3	Mus musculus nexilin (Nexn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An adherens junction which connects a cell to the extracellular matrix [goid 5924] [evidence ISO]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]	1110046H09Rik; AA553326; NELIN	1110046H09Rik; AA553326; NELIN
Mus musculus	RefSeq	ILMN_211900	ILMN_211900	NEXN	NM_199465.1	NM_199465.1		68810	41054993	NM_199465.1	Nexn	NP_955759.1	ILMN_2620563	002340711	S	980	ATAAAACAGTGTCTCAAGAATCTCTTACTCCTGGAAAACTAGAAATTAAT	3	-	151906909-151906958	3qH3	Mus musculus nexilin (Nexn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An adherens junction which connects a cell to the extracellular matrix [goid 5924] [evidence ISO]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]	1110046H09Rik; AA553326; NELIN	1110046H09Rik; AA553326; NELIN
Mus musculus	RefSeq	ILMN_233373	ILMN_233373	GM1322	NM_001033477.1	NM_001033477.1		383709	85702008	NM_001033477.1	Gm1322	NP_001028649.1	ILMN_2985761	003130328	S	1378	GAATTCCTATAGACACATGGGGTCTACCAGTGAGAACAGCCTACATCTGC	2	+	66986463-66986512	2qC1.3	Mus musculus gene model 1322, (NCBI) (Gm1322), mRNA.					
Mus musculus	RefSeq	ILMN_201275	ILMN_201275	LOC385014	XM_357992.1	XM_357992.1			38090350	XM_357992.1	LOC385014		ILMN_1231338	000830603	S	430	GCCTCTGTGAAGAGCATAGAAGGCCACCCCAATGCGGAAGCAATACTCAC										
Mus musculus	MEEBO	ILMN_224290	ILMN_224290	9930019B18RIK	scl26426.10_687				31342623	NM_177024	9930019B18Rik		ILMN_2778024	006840369	S	3252	TAAGTGACCTTTCTTTGTTTTTGCCCTCTAAAAAAATTTATCTGAACTCA										
Mus musculus	RefSeq	ILMN_219520	ILMN_219520	LYRM1	NM_029610.1	NM_029610.1		73919	21313199	NM_029610.1	Lyrm1	NP_083886.1	ILMN_2804900	001010463	S	693	CACCGCACGACGAGGTCGGGGACTTCAAACCCAGGAAAAACTGAGAAAAC	7	+	119707316-119707365	7qF2	Mus musculus LYR motif containing 1 (Lyrm1), mRNA.				1110065L10Rik; 2310004B22Rik; 4930404J24Rik	1110065L10Rik; 2310004B22Rik; 4930404J24Rik
Mus musculus	MEEBO	ILMN_193986	ILMN_193986	9530020I12RIK	scl077442.1_322				51766807	XM_488624	9530020I12Rik		ILMN_2502281	004900431	S	6	CCCAAGCGATGCCTTCACTTGGTGAAACCTTGGAGTTGGTGCCCAAACTT										
Mus musculus	MEEBO	ILMN_193986	ILMN_193986	9530020I12RIK	scl077442.1_322				51766807	XM_488624	9530020I12Rik		ILMN_2728633	003610500	S	254	TCCAGTAAAGTGTTCCATCCTGAGATCTTCTGCTCTGTTTGGACTTCTGC										
Mus musculus	RefSeq	ILMN_218913	ILMN_218913	NR4A1	NM_010444.1	NM_010444.1		15370	6754215	NM_010444.1	Nr4a1	NP_034574.1	ILMN_2701881	007150598	S	2189	CACTCTGTTGTAAATAAGCTGACGCTACTGTAAATACAGAAAGGAAGAGG	15	+	101104954-101105003	15qF2	Mus musculus nuclear receptor subfamily 4, group A, member 1 (Nr4a1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	N10; Hbr1; NP10; nur77; GFRP1; NGFIB; Hbr-1; TR3; Gfrp; Hmr; NGFI-B; TIS1	N10; Hbr1; NP10; nur77; GFRP1; NGFIB; Hbr-1; TR3; Gfrp; Hmr; NGFI-B; TIS1
Mus musculus	RefSeq	ILMN_208934	ILMN_208934	WDR69	NM_027725.2	NM_027725.2		71227	142374152	NM_027725.2	Wdr69	NP_082001.1	ILMN_1223727	002570605	S	1231	GCGCCAGGATACTGACAAATGACGTCAGAGTGCCTTAACAGCACTTCTTC	1	+	83207025-83207074	1qC5	Mus musculus WD repeat domain 69 (Wdr69), mRNA.				4930563E19Rik; 4933429D11Rik	4930563E19Rik; 4933429D11Rik
Mus musculus	RefSeq	ILMN_221272	ILMN_221272	IVL	NM_008412.2	NM_008412.2		16447	83627714	NM_008412.2	Ivl	NP_032438.2	ILMN_2733290	004590129	S	1347	GAGAAGGAGCTCTCAGACCAGCCACTGGATCAAGCACTAGTAAAGAAGGG	3	-	92375329-92375378	3qF1	Mus musculus involucrin (Ivl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IEA]			
Mus musculus	RefSeq	ILMN_186250	ILMN_221272	IVL	NM_008412.2	NM_008412.2		16447	83627714	NM_008412.2	Ivl	NP_032438.2	ILMN_1233243	006940367	S	1812	GCCTGTCAGTAGTTAGCAACTCTGATGTCACTCCTAATGTTGTGGCAGAA	3	-	92374864-92374913	3qF1	Mus musculus involucrin (Ivl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IEA]			
Mus musculus	RefSeq	ILMN_210769	ILMN_259651	1700007B13RIK	XM_913577.2	XM_913577.2		71830	94381238	XM_913577.2	1700007B13Rik	XP_918670.1	ILMN_1236696	007610022	S	2074	GCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT				7qF2	PREDICTED: Mus musculus RIKEN cDNA 1700007B13 gene (1700007B13Rik), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]		
Mus musculus	Riken	ILMN_207211	ILMN_207211	TRIM2	ri|C530040J06|PX00669B18|AK083057|2824					AK083057	Trim2		ILMN_1246620	000150341	S	2462	GATGGCAGCTGAGGCCCTGGGAGGGCTTTGGATACCTCAGAGATTCTTCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]		
Mus musculus	RefSeq	ILMN_236309	ILMN_236309	OLFR198	NM_001011808.1	NM_001011808.1		258036	58801381	NM_001011808.1	Olfr198	NP_001011808.1	ILMN_3160318	005260632	S	756	TGGCACACTTTTCCTCATGTATGTGCGTCCCGGGTCTGGATCAGGTGAAG	16	-	59201445-59201494	16qC1.3	Mus musculus olfactory receptor 198 (Olfr198), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR182-8	MOR182-8
Mus musculus	MEEBO	ILMN_187819	ILMN_187819	9629812_617	9629812_617						9629812_617		ILMN_2447388	004730553	S	8	TGGGTTGGGACTATCCTAAATGTGATCGTGCTATGCCAAACATACTGCGT										
Mus musculus	MEEBO	ILMN_193649	ILMN_193649	9626958_331_RC	9626958_331_rc						9626958_331_rc		ILMN_2499159	003830270	S	13	TCGGACAGACACAGATAAGTTGCTGGCCAGCTTACCTCCCGGTGGTGGGT										
Mus musculus	Riken	ILMN_204029	ILMN_204029	A730002K21RIK	ri|A730002K21|PX00148M18|AK042540|3705					AK042540	A730002K21Rik		ILMN_2561818	006110709	S	3085	CCAGCCATAGAGTTCTGTAGTCAGCTTATTCCTGAGTTAGAGATTGCATG										
Mus musculus	MEEBO	ILMN_223307	ILMN_223307	0610005I04	scl29691.6.1_260	NM_177579.2			31341435	NM_177579.2	0610005I04		ILMN_2762289	003190307	S	1431	TTCTGGATAGGAGAGGGGATATTGTATTGATTCACCCCATCTTGTGTCAC										
Mus musculus	MEEBO	ILMN_186904	ILMN_186904	SLC41A1	scl17492.12_326				33238869	NM_173865	Slc41a1		ILMN_2617833	007550075	S	2417	ACTTCTCCATCCCATACTTGACTGCTTTGGGGGACCTGCTTGGCACCGGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]		
Mus musculus	Riken	ILMN_203487	ILMN_203487	A930023F05RIK	ri|A930023F05|PX00066J09|AK044566|4206					AK044566	A930023F05Rik		ILMN_1238862	001260114	S	4015	AACACAGATGGCGACTTGGTTCTCCGCTGTCCACTGGCTCGCTCTCCGCA										
Mus musculus	MEEBO	ILMN_189968	ILMN_189968	C130013B13RIK	scl0319834.1_29						C130013B13Rik		ILMN_2466031	001660390	S	4	ATCCAACTTGGTTGCTCGTGAAGCTGCTGAAATCCCTGCCAGGATGTGGA										
Mus musculus	RefSeq	ILMN_209784	ILMN_209784	ALDH9A1	NM_019993.3	NM_019993.3		56752	115334670	NM_019993.3	Aldh9a1	NP_064377.2	ILMN_2599181	005050603	S	2147	CTGGTGAATCAGTACATATACATTCTTTGTTCATTGACAACTAAAAAACA	1	+	169297975-169298024	1qH2.3	Mus musculus aldehyde dehydrogenase 9, subfamily A1 (Aldh9a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]; Catalysis of the reaction: NAD+ + 4-trimethylammoniobutanal = NADH + 4-trimethylammoniobutanoate [goid 47105] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP [goid 16620] [evidence IDA]	AA139417; ESTM40; TMABA-DH	AA139417; ESTM40; TMABA-DH
Mus musculus	RefSeq	ILMN_221318	ILMN_221318	SKP1A	NM_011543.3	NM_011543.3		21402	141803097	NM_011543.3	Skp1a	NP_035673.2	ILMN_2733888	006900541	S	1258	GTGGTATGTCATCTTTTTATCATCATTGTTCCCAGGTGGAGAAACACTAC	11	+	52060178-52060227	11qB1.3	Mus musculus S-phase kinase-associated protein 1A (Skp1a), mRNA.	A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1) [goid 19005] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IC ]	2610206H23Rik; 15kDa; p19A; 2610043E24Rik; p19Skp1; EMC19; SKP1; Tceb1l; OCP-II; OCP2	2610206H23Rik; 15kDa; p19A; 2610043E24Rik; p19Skp1; EMC19; SKP1; Tceb1l; OCP-II; OCP2
Mus musculus	RefSeq	ILMN_223082	ILMN_223082	DCXR	NM_026428.1	NM_026428.1		67880	13385923	NM_026428.1	Dcxr	NP_080704.1	ILMN_2759108	005490719	S	276	CCCGTGGACCTTCTGGTGAACAATGCTGCTGTGGCTCTGTTGCAGCCCTT	11	-	120587755-120587804	11qE2	Mus musculus dicarbonyl L-xylulose reductase (Dcxr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence IDA]	The chemical reactions and pathways involving D-xylose, a naturally occurring plant polysaccharide [goid 42732] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving xylulose, the ketopentose threo-2-pentulose [goid 5997] [evidence IDA]; The chemical reactions and pathways involving nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; metabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6739] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: xylitol + NADP+ = L-xylulose + NADPH [goid 50038] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16614] [evidence IDA]	1810027P18Rik; 0610038K04Rik	1810027P18Rik; 0610038K04Rik
Mus musculus	RefSeq	ILMN_223082	ILMN_223082	DCXR	NM_026428.1	NM_026428.1		67880	13385923	NM_026428.1	Dcxr	NP_080704.1	ILMN_2868280	003140274	S	612	CCGGACCAACTGGAGTGACCCCCACAAAGCTAAGGCCATGCTGGATCGTA	11	-	120587072-120587121	11qE2	Mus musculus dicarbonyl L-xylulose reductase (Dcxr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence IDA]	The chemical reactions and pathways involving D-xylose, a naturally occurring plant polysaccharide [goid 42732] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving xylulose, the ketopentose threo-2-pentulose [goid 5997] [evidence IDA]; The chemical reactions and pathways involving nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; metabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6739] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: xylitol + NADP+ = L-xylulose + NADPH [goid 50038] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16614] [evidence IDA]	1810027P18Rik; 0610038K04Rik	1810027P18Rik; 0610038K04Rik
Mus musculus	RefSeq	ILMN_222137	ILMN_222137	CCDC123	NM_028120.1	NM_028120.1		72140	13386287	NM_028120.1	Ccdc123	NP_082396.1	ILMN_2745151	005960224	S	2345	GACGCTCCTCTCAGGGAGACCTACTGATTGGCCATGATTTCAGCTATGGT	7	+	35147222-35147271	7qB2	Mus musculus coiled-coil domain containing 123 (Ccdc123), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2610507L03Rik	2610507L03Rik
Mus musculus	RefSeq	ILMN_218060	ILMN_218060	SLC37A1	NM_153062.2	NM_153062.2		224674	118130176	NM_153062.2	Slc37a1	NP_694702.1	ILMN_1214066	006840301	S	2296	TAGCCTGCACAGTGACAGGTAGGACTGTCCTGAAGCACCCAGGTAGCCCA	17	+	31487008-31487057	17qA3.3-qB1	Mus musculus solute carrier family 37 (glycerol-3-phosphate transporter), member 1 (Slc37a1), mRNA.				MGC28167; G3PP	MGC28167; G3PP
Mus musculus	RefSeq	ILMN_230060	ILMN_230060	V1RA3	NM_053218.1	NM_053218.1		113845	16716522	NM_053218.1	V1ra3	NP_444448.1	ILMN_2922230	005870162	S	441	CAGTCACCTCCTTATATCCATCACTGCCACCCCCAATTTGACCATGAATG	6	-	89986345-89986394	6qD1	Mus musculus vomeronasal 1 receptor, A3 (V1ra3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]		
Mus musculus	Riken	ILMN_207185	ILMN_207185	NEK7	ri|7330417M05|PX00650F11|AK078639|2649					AK078639	Nek7		ILMN_2585683	000670327	S	2212	GCTGCGTTGCAGTCACTCTTGAGTAGGCTGTAGTGTTTGAGCTTTACCGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214456	ILMN_214456	CCDC19	XM_355284.5	XM_355284.5		71870	94364522	XM_355284.5	Ccdc19	XP_355284.3	ILMN_2648180	007550296	S	1743	CTCCCCGGGGCATCCAAACTGCTGCTAACCTACACATTTCATAGTTACAG	1	+	174475928-174475977	1qH3	PREDICTED: Mus musculus coiled-coil domain containing 19, transcript variant 1 (Ccdc19), mRNA.					
Mus musculus	MEEBO	ILMN_224005	ILMN_224005	MAGEA4	scl8204.1.1_283				9937975	NM_020280	Magea4		ILMN_2772977	005690068	S	848	CCGATCCCAGAGCTTACACTGAAAAATACGCAGAGGCTTTGAGAGATGAG										
Mus musculus	MEEBO	ILMN_209156	ILMN_209156	4833441J24RIK	scl00101100.1_21	NM_133923.2			31981612	NM_133923.2	4833441J24Rik		ILMN_1238103	004180706	S	1085	GGGTTGGTTCTGTCTGGAGTCTAGATAAGTTGCTGGCTGGACCAGGTTCT										
Mus musculus	MEEBO	ILMN_209156	ILMN_209156	4833441J24RIK	scl00101100.1_21	NM_133923.2			31981612	NM_133923.2	4833441J24Rik		ILMN_2655139	005870068	S	1246	GAGATGGAATTTAGGCCATGGTCTGATTCTCAGGTTAGAATAAGTATCAG										
Mus musculus	RefSeq	ILMN_198261	ILMN_198261	LOC381132	XM_355049.1	XM_355049.1			38083406	XM_355049.1	LOC381132		ILMN_1242131	006760066	S	326	GCAATATCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGGC										
Mus musculus	RefSeq	ILMN_216898	ILMN_216898	YIPF7	NM_023784.4	NM_023784.4		75581	118130606	NM_023784.4	Yipf7	NP_076273.1	ILMN_1220086	002370121	S	772	GCAGCTTCTTGTCGCTTACCCCTGTGCCTTACTTTATGGACTCTTTGCCC	5	-	69908291-69908340	5qC3.1	Mus musculus Yip1 domain family, member 7 (Yipf7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			2310016N21Rik; Yip1b; MGC107572	2310016N21Rik; Yip1b; MGC107572
Mus musculus	RefSeq	ILMN_223177	ILMN_223177	FGF18	NM_008005.1	NM_008005.1		14172	6679780	NM_008005.1	Fgf18	NP_032031.1	ILMN_1219545	001500487	S	843	CATTGTGTTTAAAAGAAGACAAAAACTGAACCTAAAGTCTTGGGAGGAGG	11	-	33017623-33017672	11qA4	Mus musculus fibroblast growth factor 18 (Fgf18), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed [goid 1957] [evidence IMP]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the fibroblast growth factor receptor (FGFR) [goid 5104] [evidence TAS]	FGF-18; D130055P09Rik	FGF-18; D130055P09Rik
Mus musculus	RefSeq	ILMN_223177	ILMN_223177	FGF18	NM_008005.1	NM_008005.1		14172	6679780	NM_008005.1	Fgf18	NP_032031.1	ILMN_2764004	003310717	S	754	GCTAGGTCCGGCCACACTCACCCCCCCAGAGAACTACATCAGAGGAATAT	11	-	33017712-33017761	11qA4	Mus musculus fibroblast growth factor 18 (Fgf18), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed [goid 1957] [evidence IMP]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the fibroblast growth factor receptor (FGFR) [goid 5104] [evidence TAS]	FGF-18; D130055P09Rik	FGF-18; D130055P09Rik
Mus musculus	Riken	ILMN_204351	ILMN_204351	A930039F13RIK	ri|A930039F13|PX00067O02|AK044748|2276					AK044748	A930039F13Rik		ILMN_1231516	002320075	S	1996	GTACACAGAAGTAGGAAACACAGCCCAAGTGCGCCCAGCCAGCCAGCGGT										
Mus musculus	RefSeq	ILMN_222249	ILMN_222249	NOG	NM_008711.1	NM_008711.1		18121	7110674	NM_008711.1	Nog	NP_032737.1	ILMN_2746870	006020719	S	640	CGCTGCGGCTGGATTCCCATCCAGTACCCCATCATTTCCGAGTGTAAGTG	11	-	89162645-89162694	11qC	Mus musculus noggin (Nog), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; The process by which the anatomical structures of the notochord are generated and organized. Morphogenesis pertains to the creation of form. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column [goid 48570] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a mesenchymal cell [goid 48762] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IGI]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of astrocyte differentiation [goid 48712] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell proliferation [goid 60044] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IDA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [pmid 10780858] [evidence IMP]			
Mus musculus	RefSeq	ILMN_218710	ILMN_218710	GDAP1	NM_010267.2	NM_010267.2		14545	31981767	NM_010267.2	Gdap1	NP_034397.1	ILMN_2699257	001190113	S	2746	CTATAATTCCTTTTTGATTCTATTATTCCATTTCATAAGCTAGATGTACT	1	+	17153184-17153233	1qA3	Mus musculus ganglioside-induced differentiation-associated-protein 1 (Gdap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Mus musculus	RefSeq	ILMN_218710	ILMN_218710	GDAP1	NM_010267.2	NM_010267.2		14545	31981767	NM_010267.2	Gdap1	NP_034397.1	ILMN_2900962	007400356	S	3755	GGTACTGCCATTATATGCCTTTTGATTCTCAAGACTGGTGAACTGCTTGC	1	+	17154193-17154242	1qA3	Mus musculus ganglioside-induced differentiation-associated-protein 1 (Gdap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Mus musculus	RefSeq	ILMN_218710	ILMN_218710	GDAP1	NM_010267.2	NM_010267.2		14545	31981767	NM_010267.2	Gdap1	NP_034397.1	ILMN_2735940	006550341	S	3558	GCACCGTATGATAAGGAGGTGCACAGCCACTGTTAGCCAGAGAGGCACTT	1	+	17153996-17154045	1qA3	Mus musculus ganglioside-induced differentiation-associated-protein 1 (Gdap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Mus musculus	RefSeq	ILMN_216711	ILMN_216711	THOP1	NM_022653.3	NM_022653.3		50492	141801686	NM_022653.3	Thop1	NP_073144.2	ILMN_2674324	000990092	S	2230	GCAACCCTTGGGCGTACAGATGAGCTTGGGGAAGTTTCCATCCTTGTCCC	10	+	80544817-80544866	10qC1	Mus musculus thimet oligopeptidase 1 (Thop1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another [goid 6518] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]	AI131655; AI327041; EP24.15	AI131655; AI327041; EP24.15
Mus musculus	RefSeq	ILMN_199694	ILMN_199694	LOC383825	XM_357279.1	XM_357279.1			38076193	XM_357279.1	LOC383825		ILMN_2536142	004250196	S	813	GAGACACTTCAGGTTGGCTGATAGGGGAACTGTATGGTCAGAGAGCAGCC										
Mus musculus	RefSeq	ILMN_197911	ILMN_197911	LOC269628	XM_193319.2	XM_193319.2			38079571	XM_193319.2	LOC269628		ILMN_1237552	001440056	S	1138	GTGGACCGTTCAGCTGCTTATGCTGTTCATTAGAAGAGTGAGAGAGAGCT										
Mus musculus	RefSeq	ILMN_200044	ILMN_230434	EG384179	XM_912278.3	XM_912278.3		384179	149253701	XM_912278.3	EG384179	XP_917371.1	ILMN_1220253	004220348	S	480	CAGTCCACAAACACAGAGAGATGCGTGGCCTTGGAAAGGGCCACAAGTTC				5qB3	PREDICTED: Mus musculus predicted gene, EG384179 (EG384179), mRNA.					
Mus musculus	RefSeq	ILMN_210611	ILMN_210611	RNF25	NM_021313.1	NM_021313.1		57751	10946615	NM_021313.1	Rnf25	NP_067288.1	ILMN_2863903	007150148	S	1273	AAAAACCGTACACCGGGTTCTTGCTATCCCCACCTACCTCGGGGCCAGGG	1	-	74640458-74640507	1qC3	Mus musculus ring finger protein 25 (Rnf25), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AO7; 0610009H16Rik	AO7; 0610009H16Rik
Mus musculus	RefSeq	ILMN_210611	ILMN_210611	RNF25	NM_021313.1	NM_021313.1		57751	10946615	NM_021313.1	Rnf25	NP_067288.1	ILMN_2863905	005900639	S	1082	GCTGCACCCCAAAAGGTACCAGTGAAATCCATGAACTGCCACCTCCTGAG	1	-	74640649-74640698	1qC3	Mus musculus ring finger protein 25 (Rnf25), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AO7; 0610009H16Rik	AO7; 0610009H16Rik
Mus musculus	RefSeq	ILMN_210611	ILMN_210611	RNF25	NM_021313.1	NM_021313.1		57751	10946615	NM_021313.1	Rnf25	NP_067288.1	ILMN_2607369	004730278	S	734	GGCAGCAGGAAAAGGGTGGTATCATTGACCTTGAGGCTGAACGGAACCGA	1	-	74641154-74641203	1qC3	Mus musculus ring finger protein 25 (Rnf25), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AO7; 0610009H16Rik	AO7; 0610009H16Rik
Mus musculus	RefSeq	ILMN_217807	ILMN_217807	OLFR961	NM_146504.1	NM_146504.1		258497	33239049	NM_146504.1	Olfr961	NP_666715.1	ILMN_2687812	001850370	S	278	AGGGATGTGTTGTACAACACTTCTTCTATCATTGTCTGGGTTGCACATTG	9	+	39454590-39454639	9qA5.1	Mus musculus olfactory receptor 961 (Olfr961), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR224-5; MGC157550	MOR224-5; MGC157550
Mus musculus	RefSeq	ILMN_217807	ILMN_217807	OLFR961	NM_146504.1	NM_146504.1		258497	33239049	NM_146504.1	Olfr961	NP_666715.1	ILMN_2990768	003440703	S	818	TGCACAATCTTGTGACACCCACCATCAACCCATTGATCTACAGCCTGAGG	9	+	39455130-39455179	9qA5.1	Mus musculus olfactory receptor 961 (Olfr961), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR224-5; MGC157550	MOR224-5; MGC157550
Mus musculus	RefSeq	ILMN_198205	ILMN_198205	LOC243359	XM_112323.4	XM_112323.4			38082821	XM_112323.4	LOC243359		ILMN_1218143	001050722	S	1455	AGCACCTAGGCTCATTTACCAGGCCAAGGTCACCTGATAGGGCCAGGAAG										
Mus musculus	RefSeq	ILMN_211830	ILMN_233285	OLFR11	NM_146542.2	NM_146542.2		218066	153945887	NM_146542.2	Olfr11	NP_666753.2	ILMN_2619903	005810632	S	664	GCCCGTGCCATCTTGAAAATCCAATCTGCCGAAGGTCGTCAAAAGGCGTT				13qA3.1	Mus musculus olfactory receptor 11 (Olfr11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-11; M49; ORL121; RP23-138F20.19	MOR256-11; M49; ORL121; RP23-138F20.19
Mus musculus	RefSeq	ILMN_185893	ILMN_185893	V1RC1	NM_053231.2	NM_053231.2		113858	118200346	NM_053231.2	V1rc1	NP_444461.2	ILMN_2430897	002480341	S	862	ATAATTATGCTGAAAAACCTGCAATCAAAACATCAACAGAGATTTTTTAA	6	+	57064280-57064329	6qB3	Mus musculus vomeronasal 1 receptor, C1 (V1rc1), mRNA.		The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]		
Mus musculus	MEEBO	ILMN_189763	ILMN_189763	FCRH3	scl23026.14.1_6				51510888	NM_183222	Fcrh3		ILMN_2464151	004490451	S	7	AGAACCCCCGAGGAGAATGGCAGACTAGAAGACGTTTCTACGCCACCCTT										
Mus musculus	RefSeq	ILMN_200008	ILMN_200008	LOC381636	XM_358632.1	XM_358632.1			38079763	XM_358632.1	LOC381636		ILMN_1232330	005090243	S	307	AGGTCGTACAACTCAGTGTTCTTGCTTGGAGCAGCCCCAGAGGCATCAGC										
Mus musculus	Riken	ILMN_207163	ILMN_207163	F730039D13RIK	ri|F730039D13|PL00003P03|AK089490|2505					AK089490	F730039D13Rik		ILMN_1217937	003450026	S	2219	GCTTCAGAGAGAAGGGCTTTGTTTCAGTGTACGGCTGAGGCTCCCTGGCC										
Mus musculus	RefSeq	ILMN_216452	ILMN_248886	OLFR909	NM_146873.1	NM_146873.1		258873	22129134	NM_146873.1	Olfr909	NP_667084.1	ILMN_2671243	001190554	S	546	CCCTCTGTTGCAGCTCTCCTGTACCAGCACTTATGCCAATGAAATAGAGA	9	+	38331864-38331913	9qA5.1	Mus musculus olfactory receptor 909 (Olfr909), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC157508; MOR165-1	MGC157508; MOR165-1
Mus musculus	Riken	ILMN_204014	ILMN_204014	ADH5	ri|A630038G01|PX00145B06|AK041792|3727					AK041792	Adh5		ILMN_1212856	001050730	S	3602	GTGTAGGCATCACATTCCCCAACTTAGGAAGCCAGCAGTGAGATGGCCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A organ system process carried out by any of the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange [goid 3016] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions [goid 51409] [evidence IMP]; The posttranslational S-nitrosylation of peptidyl-cysteine to form peptidyl-S-nitrosyl-L-cysteine [goid 18119] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is increased [goid 45777] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of formaldehyde (methanal, H2C=O), the simplest aldehyde [goid 46294] [evidence IMP]; The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 1523] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Catalysis of the reaction: S-(hydroxymethyl)glutathione + NAD(P)+ = S-formylglutathione + NAD(P)H + H+ [goid 51903] [evidence IMP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]		
Mus musculus	RefSeq	ILMN_256309	ILMN_256309	OLFR600	NM_147046.1	NM_147046.1		259048	22128862	NM_147046.1	Olfr600	NP_667257.1	ILMN_2825410	000610072	S	883	GCAGTCCGAACCAAACAGATAAGGGAGCGGGTATTGCGGATATTGAACTG	7	-	110494508-110494557	7qE3	Mus musculus olfactory receptor 600 (Olfr600), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR39-1	MOR39-1
Mus musculus	RefSeq	ILMN_194157	ILMN_194157	V1RI4	NM_134221.1	NM_134221.1		171255	21717758	NM_134221.1	V1ri4	NP_598982.1	ILMN_2850048	000940592	S	91	GTGCACAATTCTGCCTTGGGGACTGAGAAAAAGCCTCTCGACCTCATTCT	13	+	22566577-22566626	13qA3.1	Mus musculus vomeronasal 1 receptor, I4 (V1ri4), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_189064	ILMN_246557	ADAMTS8	NM_013906.2	NM_013906.2		30806	117647242	NM_013906.2	Adamts8	NP_038934.2	ILMN_2737771	005080274	S	3371	GCGGGGAAAAATCAGTATACAAGAGGTATAAGGCCAGGTGTTGGCAGTGA	9	+	30770182-30770231	9qA4	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8 (Adamts8), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	METH2; METH-2	METH2; METH-2
Mus musculus	MEEBO	ILMN_218466	ILMN_218466	PROSC	scl0114863.5_23	NM_054057.1			16930822	NM_054057.1	Prosc		ILMN_2696199	005960414	S	383	CTCCTGGCAGAAGAAAGGTCCTACAGAACCACTGAAGGTGATGGTCCAGA										
Mus musculus	RefSeq	ILMN_220394	ILMN_220394	ARMETL1	NM_177647.4	NM_177647.4		227526	118130456	NM_177647.4	Armetl1	NP_808315.1	ILMN_2721460	001940341	S	2581	CGTGCAGGCAGCAGGGGCGCTTGTGGTTTCTAATGCTAGCCTATCAGTCT	2	+	3443216-3443265	2qA1	Mus musculus arginine-rich, mutated in early stage tumors-like 1 (Armetl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	9330140G23; MGC129430	9330140G23; MGC129430
Mus musculus	RefSeq	ILMN_214824	ILMN_214824	CD74	NM_010545.3	NM_010545.3		16149	110624778	NM_010545.3	Cd74	NP_034675.1	ILMN_3089584	003360338	A	896	ACAGAAGGAGGACGCTGGAGGGCCTTGCTGGCTACCGCTATCTAAAGGGA	18	+	60971979-60972028	18qE1	Mus musculus CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) (Cd74), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IMP]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell differentiation [goid 45581] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IDA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IMP]	Interacting selectively with major histocompatibility complex class II molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ia-GAMMA; Ii; DHLAG; HLADG; CLIP	Ia-GAMMA; Ii; DHLAG; HLADG; CLIP
Mus musculus	RefSeq	ILMN_222428	ILMN_222428	SPRY2	NM_011897.2	NM_011897.2		24064	141802582	NM_011897.2	Spry2	NP_036027.1	ILMN_2749464	001230242	S	1462	GCTTGCTACAATTCAGCTAATGGAACCCGAAGGAAGAACAACAGAAGTTG	14	-	106291739-106291788	14qE2.3	Mus musculus sprouty homolog 2 (Drosophila) (Spry2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	sprouty2	sprouty2
Mus musculus	RefSeq	ILMN_214971	ILMN_214971	STIL	NM_009185.2	NM_009185.2		20460	142356051	NM_009185.2	Stil	NP_033211.1	ILMN_2654075	006660224	S	4802	GAGGTGTTCTGTGTACTCATTGATTCACAGTTTTTGTGTATAGATACATG	4	+	114702459-114702508	4qD1	Mus musculus Scl/Tal1 interrupting locus (Stil), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Sil	Sil
Mus musculus	RefSeq	ILMN_220219	ILMN_220219	TAS2R124	NM_207026.1	NM_207026.1		387351	46309598	NM_207026.1	Tas2r124	NP_996909.1	ILMN_2719246	006250162	S	863	AGACCTCTCTTTGGGTAATGAGGCAGCTGGGATGTAGGATGAAAAGACAG	6	+	132705610-132705659	6qG1	Mus musculus taste receptor, type 2, member 124 (Tas2r124), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Tas2r24; mGR24; T2R24; mt2r50	Tas2r24; mGR24; T2R24; mt2r50
Mus musculus	RefSeq	ILMN_195802	ILMN_322871	4930421P07RIK	XR_032878.1	XR_032878.1		195712	149253882	XR_032878.1	4930421P07Rik		ILMN_2518857	005900048	S	268	CAGGCTCACCAAGACTAGACTATGATTGGGAGAAGGACAGCCGGAGTCTC	5	-	38966805-38966854	5qB3	PREDICTED: Mus musculus RIKEN cDNA 4930421P07 gene (4930421P07Rik), misc RNA.					
Mus musculus	Riken	ILMN_205292	ILMN_205292	4832410F06RIK	ri|4832410F06|PX00313I14|AK029274|3049					AK029274	4832410F06Rik		ILMN_1247502	005900021	S	2787	GGAGCACTTGCTGCTCTTGTAGAGGAAGGGCCTGAGTTCAGTTCCCAGCT										
Mus musculus	RefSeq	ILMN_196441	ILMN_232050	4930564D02RIK	XM_898342.3	XM_898342.3		75269	149251347	XM_898342.3	4930564D02Rik	XP_903435.3	ILMN_1233707	005220561	S	382	CTGTGCGGGGAGATCAACTCTAGCCACTCCTTTGCTCTTTGTCAGAGCCC	3	+	104881369-104881418	3qF2.2	PREDICTED: Mus musculus RIKEN cDNA 4930564D02 gene (4930564D02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_247528	ILMN_247528	4930538K18RIK	NM_029198.1	NM_029198.1		75180	58037398	NM_029198.1	4930538K18Rik	NP_083474.1	ILMN_3078582	000110373	I	1403	CAATGGCTGTCTACCAACAGAAAGTCCAAGAATCTGGCTTCTAAGATCTC	4	-	118703038-118703087	4qD2.1	Mus musculus RIKEN cDNA 4930538K18 gene (4930538K18Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_247528	ILMN_247528	4930538K18RIK	NM_029198.1	NM_029198.1		75180	58037398	NM_029198.1	4930538K18Rik	NP_083474.1	ILMN_3157886	001190600	A	667	GGCTTCACTCATGATTCTCTTCATGATCGACCAGAGTTGCTACCCACACG	4	-	118707195-118707244	4qD2.1	Mus musculus RIKEN cDNA 4930538K18 gene (4930538K18Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_189481	ILMN_250461	GDF5	NM_008109.1	NM_008109.1		14563	6679980	NM_008109.1	Gdf5	NP_032135.1	ILMN_1256083	007150068	S	2004	GAACAGACTCTGAGTGGGCCTGGGGCTCAGGAAAGGTGTTCTTAATGAGA	2	-	155767025-155767074	2qH1	Mus musculus growth differentiation factor 5 (Gdf5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; The process, occurring after embryonic development, by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35129] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IMP]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of chondrocyte differentiation [goid 32332] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	bp; CDMP-1	bp; CDMP-1
Mus musculus	RefSeq	ILMN_217763	ILMN_217763	PSEN1	NM_008943.2	NM_008943.2		19164	118130584	NM_008943.2	Psen1	NP_032969.1	ILMN_1257180	002030731	S	241	TCTGACGCTTGTAGGCGCCTTTAGTGTTTGCTAGTTCTTCCCTTTCACGT	12	+	85029753-85029802	12qD1	Mus musculus presenilin 1 (Psen1), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43227] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Any process that modulates the establishment or extent of a resting potential, the electrical charge across the plasma membrane, with the interior of the cell negative with respect to the exterior. The resting potential is the membrane potential of a cell that is not stimulated to be depolarized or hyperpolarized [goid 60075] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IMP]; Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51966] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response [goid 2286] [evidence IGI]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; The process whereby precursor cell type acquires the specialized features of a hemopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells [goid 2244] [evidence IGI]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage [goid 2573] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence ISO]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IMP]; The process whereby a neuroblast acquires specialized structural and/or functional features of a Cajal-Retzius cell, one of a transient population of pioneering neurons in the cerebral cortex. These cells are slender bipolar cells of the developing marginal zone. One feature of these cells in mammals is that they express the Reelin gene [goid 21870] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings [goid 51563] [evidence IGI]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IGI]; The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis [goid 35282] [evidence IMP]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IMP]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IGI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein binding [goid 43393] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IMP]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IGI]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IGI]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IGI]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IGI]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; The process by which synaptic vesicles are directed to specific destination membranes, mediated by molecules at the vesicle membrane and target membrane surfaces [goid 16080] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IMP]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IGI]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IMP]; The directed movement of choline into, out of, within or between cells. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 15871] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IGI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IPI]	Ad3h; PS1; PS-1; S182	Ad3h; PS1; PS-1; S182
Mus musculus	Riken	ILMN_205255	ILMN_205255	E330001L02RIK	ri|E330001L02|PX00210L15|AK054244|1554					AK054244	E330001L02Rik		ILMN_2571169	004210630	S	1266	TGTGAACTTGCCATCTAGAATTACCCAGCTTTTGGGCATGTGGATGAGTG										
Mus musculus	RefSeq	ILMN_215964	ILMN_215964	LDHC	NM_013580.2	NM_013580.2		16833	31980775	NM_013580.2	Ldhc	NP_038608.1	ILMN_2665749	001260338	S	217	ACTGAGGGGAGAGGCACTGGATCTTCTGCACGGCAGTCTTTTCCTTAGCA	7	+	46734495-46734544	7qB4	Mus musculus lactate dehydrogenase C (Ldhc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA];  [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IEA]	Ldh3; Ldh-3; Ldhc4; Ldh-x	Ldh3; Ldh-3; Ldhc4; Ldh-x
Mus musculus	RefSeq	ILMN_215964	ILMN_215964	LDHC	NM_013580.2	NM_013580.2		16833	31980775	NM_013580.2	Ldhc	NP_038608.1	ILMN_2930177	003370180	S	846	CTTAAGAGAGTGCATCCTGTTACCACGCTGGTTAAGGGCTTCCATGGGAT	7	+	46744605-46744639:46745755-46745769	7qB4	Mus musculus lactate dehydrogenase C (Ldhc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA];  [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IEA]	Ldh3; Ldh-3; Ldhc4; Ldh-x	Ldh3; Ldh-3; Ldhc4; Ldh-x
Mus musculus	RefSeq	ILMN_198768	ILMN_198768	LOC194735	XM_111887.3	XM_111887.3			38087344	XM_111887.3	LOC194735		ILMN_1239359	004200398	S	261	CTCCTACAGCCGCCATTCTAGCCGGCATTCTTGTTACCCTGCCACCATGA										
Mus musculus	MEEBO	ILMN_188605	ILMN_188605	PGK1	scl018655.12_25				6679290	NM_008828	Pgk1		ILMN_1226872	003870470	S	1376	GTGGCACAGACCTTAACAGTGCAAGCATCTCAGCTCGTCTTACTGCATCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate [goid 4618] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185985	ILMN_244911	CAND1	XM_125901.8	XM_125901.8		71902	149261083	XM_125901.8	Cand1	XP_125901.8	ILMN_1218794	001410349	S	7706	ACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACACATG	10	-	118636598-118636647	10qD2	PREDICTED: Mus musculus cullin associated and neddylation disassociated 1, transcript variant 1 (Cand1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201987	ILMN_244911	CAND1	XM_125901.8	XM_125901.8		71902	149261083	XM_125901.8	Cand1	XP_125901.8	ILMN_1252356	004900136	S	4359	TGCACTGAACGACAGGTTGACCACAGCCACGGGAGAGAAGTGTCCAGAGC	10	-	118639945-118639994	10qD2	PREDICTED: Mus musculus cullin associated and neddylation disassociated 1, transcript variant 1 (Cand1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_206562	ILMN_244911	CAND1	XM_125901.8	XM_125901.8		71902	149261083	XM_125901.8	Cand1	XP_125901.8	ILMN_1218433	003450561	S	4374	GTTGACCACAGCCACGGGAGAGAAGTGTCCAGAGCTTCACGATGTTCCAC	10	-	118639930-118639979	10qD2	PREDICTED: Mus musculus cullin associated and neddylation disassociated 1, transcript variant 1 (Cand1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184827	ILMN_184827	WDFY1	scl16574.13.1_69				21312279	NM_027057	Wdfy1		ILMN_2491914	002490360	S	19	TTTTATCAAGACCTATCCAGCCCACCAGAACCGCGTGTCTGCTATCATCT								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184827	ILMN_184827	WDFY1	scl16574.13.1_69				21312279	NM_027057	Wdfy1		ILMN_2421925	000020646	S	17	ACCCTTCATGTAGCTCAACAGCCACTGTCGTGTAAATGGACATTAGACGC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216667	ILMN_232659	BMP8A	NM_007558.2	NM_007558.2		12163	133892640	NM_007558.2	Bmp8a	NP_031584.1	ILMN_2773348	002340333	S	1610	CCATCCTCAGCCCACAATGGCAAATTCTGGATGGTCTAAGAAGGCCCTGG	4	-	122990145-122990194	4qD2.2	Mus musculus bone morphogenetic protein 8a (Bmp8a), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence TAS]	OP-2; OP2; Bmp7r1	OP-2; OP2; Bmp7r1
Mus musculus	RefSeq	ILMN_218572	ILMN_218572	SERPINB1A	NM_025429.2	NM_025429.2		66222	114158674	NM_025429.2	Serpinb1a	NP_079705.2	ILMN_1231573	004780328	S	1466	CTGGACGACTCCATCCTCAAACTTTATGGACTGTAGGTGGGTGCCTGCAG	13	-	32934363-32934412	13qA3.2	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 1a (Serpinb1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IPI]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	1190005M04Rik; EIA; EI; MNEI; MGC129309; ELANH2; M/NEI; LEI; PI2; AI325983	1190005M04Rik; EIA; EI; MNEI; MGC129309; ELANH2; M/NEI; LEI; PI2; AI325983
Mus musculus	RefSeq	ILMN_211052	ILMN_211052	EXO1	NM_012012.3	NM_012012.3		26909	141801186	NM_012012.3	Exo1	NP_036142.2	ILMN_2662763	003360441	S	443	TTAAAGGGAAGCAGCTTCTTCGAGAGGGCAAAGTGTCAGAAGCCCGAGAC	1	+	177817729-177817778	1qH4	Mus musculus exonuclease 1 (Exo1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence ISA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end [goid 8409] [evidence ISA]; Interacting selectively with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding [goid 43566] [evidence IDA]	Msa	Msa
Mus musculus	RefSeq	ILMN_211052	ILMN_211052	EXO1	NM_012012.3	NM_012012.3		26909	141801186	NM_012012.3	Exo1	NP_036142.2	ILMN_2611996	005290168	S	2668	GCCTACAAGAAAATCTTATCAACTGGAGAGATGTATTAGTCTCAATGTCA	1	+	177838709-177838758	1qH4	Mus musculus exonuclease 1 (Exo1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence ISA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end [goid 8409] [evidence ISA]; Interacting selectively with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding [goid 43566] [evidence IDA]	Msa	Msa
Mus musculus	RefSeq	ILMN_217165	ILMN_217165	EGFL6	NM_019397.3	NM_019397.3		54156	146134487	NM_019397.3	Egfl6	NP_062270.1	ILMN_2679800	002030053	S	2594	TAATCATATCCAGTAAACGGCCTTGTGTCATAGTAAGATAAAATGGTATC				XqF5	Mus musculus EGF-like-domain, multiple 6 (Egfl6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC141463; Maeg	MGC141463; Maeg
Mus musculus	Riken	ILMN_206004	ILMN_206004	SYN3	ri|A830041I09|PX00155O01|AK043854|1400					AK043854	Syn3		ILMN_1229220	003440762	S	1024	TCTGAGTCACTTTGGGCTGCTCAGGCCTCGCTTCCTGGTTGTCTGGACTC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	Riken	ILMN_207302	ILMN_207302	4732478G01RIK	ri|4732478G01|PX00637N04|AK076382|2835					AK076382	4732478G01Rik		ILMN_2586574	005890400	S	2482	GCCATCCAGGGAGTGTTCCAGGTGCTGAAGACATCAGCAATGACCAACAG										
Mus musculus	RefSeq	ILMN_220886	ILMN_244538	PHLPP	XM_129968.4	XM_129968.4		98432	94363843	XM_129968.4	Phlpp	XP_129968.3	ILMN_1232451	000110220	S	5802	AAGGACACAGCCTAAATAACTGACCCCTTACTCGCTCTGAAGAGCCTCCC	1	+	108290520-108290569	1qE2.1	PREDICTED: Mus musculus PH domain and leucine rich repeat protein phosphatase, transcript variant 1 (Phlpp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191013	ILMN_261717	SLC30A1	NM_009579.3	NM_009579.3		22782	84490410	NM_009579.3	Slc30a1	NP_033605.1	ILMN_1224883	004780673	S	1805	ATACTAAGTTTGCCAAGTAGTGTAATTGAAGTCCTTGTCTGGTCGCACAG	1	+	193733701-193733750	1qH6	Mus musculus solute carrier family 30 (zinc transporter), member 1 (Slc30a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IMP]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence ISO]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence ISO]	C130040I11Rik; Znt1; AI839647	C130040I11Rik; Znt1; AI839647
Mus musculus	RefSeq	ILMN_212626	ILMN_212626	MTTP	NM_008642.1	NM_008642.1		17777	6678959	NM_008642.1	Mttp	NP_032668.1	ILMN_2628594	003460131	S	2567	CAGGCAGGGGATATGTCTCTCGGAGAAGAAAAGAGAGCCTAGTGGCCGGA	3	-	137754111-137754160	3qG3	Mus musculus microsomal triglyceride transfer protein (Mttp), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IDA]; The covalent or non-covalent attachment of lipid moieties to an amino acid in a protein [goid 6497] [evidence IDA]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IDA]	MTP	MTP
Mus musculus	RefSeq	ILMN_221871	ILMN_221871	ISL2	NM_027397.3	NM_027397.3		104360	154146253	NM_027397.3	Isl2	NP_081673.2	ILMN_1243489	004830301	S	1634	GCAGCGAGGACGGAACAATTCCAAGAAACAGACATAACCCCCAAAGCGCA				9qB	Mus musculus insulin related protein 2 (islet 2) (Isl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IGI]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of visceral motor neurons. Visceral motor neurons innervate glandular targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21524] [evidence IMP]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of visceral motor neurons. Visceral motor neurons innervate glandular targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21524] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	3110001N10Rik	3110001N10Rik
Mus musculus	Riken	ILMN_203144	ILMN_203144	CAPPA2	ri|6030450G11|PX00057N14|AK031551|3680					AK031551	Cappa2		ILMN_2555056	002450754	S	2844	TAACATGTGTTGCTGGGATTTGAACTCCGGACCTTCGGAAGAGCAGTCAG										
Mus musculus	RefSeq	ILMN_198430	ILMN_198430	LOC210633	XM_144994.3	XM_144994.3			38085082	XM_144994.3	LOC210633		ILMN_1213270	001030021	S	1363	GCCCTGGTAATATGGGATCCAAGCGTTGCACTTTCCCAGCGTAACACTCC										
Mus musculus	RefSeq	ILMN_213142	ILMN_213142	AP1S1	NM_007457.2	NM_007457.2		11769	118131012	NM_007457.2	Ap1s1	NP_031483.1	ILMN_2634108	004890181	S	769	GAAGGGAGGAAAAACGTGACCTGGATGGGGGTGCTCAGTGGCTTCCATTT	5	-	137511322-137511371	5qG2	Mus musculus adaptor protein complex AP-1, sigma 1 (Ap1s1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence NAS]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of beta1, gamma1, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-1-containing coats are normally found primarily in the trans-Golgi network [goid 30121] [evidence NAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence NAS]	AP19	AP19
Mus musculus	RefSeq	ILMN_213142	ILMN_213142	AP1S1	NM_007457.2	NM_007457.2		11769	118131012	NM_007457.2	Ap1s1	NP_031483.1	ILMN_1215903	005310364	S	597	CTCTCACCTCTCCCCCAGACCCCTTCTCTTGGAGGGACTCGGCTGCTTTT	5	-	137511494-137511543	5qG2	Mus musculus adaptor protein complex AP-1, sigma 1 (Ap1s1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence NAS]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of beta1, gamma1, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-1-containing coats are normally found primarily in the trans-Golgi network [goid 30121] [evidence NAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence NAS]	AP19	AP19
Mus musculus	RefSeq	ILMN_213142	ILMN_213142	AP1S1	NM_007457.2	NM_007457.2		11769	118131012	NM_007457.2	Ap1s1	NP_031483.1	ILMN_2748777	006290068	S	363	TTCAACTTTGAGAAAGCCTACTTTATCCTGGACGAGTTTCTGATGGGTGG	5	-	137513354-137513403	5qG2	Mus musculus adaptor protein complex AP-1, sigma 1 (Ap1s1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence NAS]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of beta1, gamma1, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-1-containing coats are normally found primarily in the trans-Golgi network [goid 30121] [evidence NAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence NAS]	AP19	AP19
Mus musculus	RefSeq	ILMN_187338	ILMN_187338	ZBTB7A	NM_010731.3	NM_010731.3		16969	117647237	NM_010731.3	Zbtb7a	NP_034861.3	ILMN_1248181	003180170	S	2050	AGCCCGGACGGCTCAGGCCGCCTGAATGTAGCGGGCAGCGGAGGAGACGA	10	+	80611079-80611128	10qC1	Mus musculus zinc finger and BTB domain containing 7a (Zbtb7a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with the enzyme histone acetyltransferase [goid 35035] [evidence IPI]	AI452336; Lrf; Pokemon; Zbtb7; 9130006G12Rik; FBI-1; 9030619K07Rik	AI452336; Lrf; Pokemon; Zbtb7; 9130006G12Rik; FBI-1; 9030619K07Rik
Mus musculus	RefSeq	ILMN_213967	ILMN_311041	A930011G23RIK	XM_001475144.1	XM_001475144.1		319818	149254015	XM_001475144.1	A930011G23Rik	XP_001475194.1	ILMN_2642828	003460093	S	3630	ACCTGTGATTTAGATGTGGCCTAGTTTCTGTGACCCATGTAGGAAACGGA	5	-	99726286-99726335	5qE3-qE4	PREDICTED: Mus musculus RIKEN cDNA A930011G23 gene (A930011G23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200874	ILMN_200874	LOC385414	XM_358230.1	XM_358230.1			38086723	XM_358230.1	LOC385414		ILMN_1247359	001500612	S	992	GTGTCGTGAAGATTACACTGACTCCTGAAGAAGAGGCCCGCCTAAAGACA										
Mus musculus	RefSeq	ILMN_255707	ILMN_255707	GM97	NM_001033283.2	NM_001033283.2		225923	111185933	NM_001033283.2	Gm97	NP_001028455.2	ILMN_2886672	004610661	S	212	AGGGGCAAGCTGCCCAGTAACTTCCATAAGGCCAGATGAACTTGAGTTCT	19	+	11773936-11773985	19qA	Mus musculus gene model 97, (NCBI) (Gm97), mRNA.					
Mus musculus	RefSeq	ILMN_198404	ILMN_255707	GM97	NM_001033283.2	NM_001033283.2		225923	111185933	NM_001033283.2	Gm97	NP_001028455.2	ILMN_1230238	002100554	S	437	GTGCGTTGGGGAAAGTGAATCTATTGATGTGGGTAACCTAGACTTCCACC	19	+	11778408-11778422:11779867-11779901	19qA	Mus musculus gene model 97, (NCBI) (Gm97), mRNA.					
Mus musculus	RefSeq	ILMN_251145	ILMN_251145	VMN2R84	NM_001081448.1	NM_001081448.1		625068	124517667	NM_001081448.1	Vmn2r84	NP_001074917.1	ILMN_2918728	004040327	S	361	ATGCTAACAAATGACAGCCTGAATTATGTTAATTATGTCTGTGACATAGA	10	-	129829011-129829060	10qD3	Mus musculus vomeronasal 2, receptor 84 (Vmn2r84), mRNA.				Vmn2r84; Feb06V2Rchr10-129.833	Vmn2r84; Feb06V2Rchr10-129.833
Mus musculus	RefSeq	ILMN_192328	ILMN_258504	ANKRD12	NM_001025572.1	NM_001025572.1		106585	71834682	NM_001025572.1	Ankrd12	NP_001020743.1	ILMN_2508350	001260184	S	1325	AGTAAGATGATTGACGACAGGCACATTCTTAGGAAAGAACAGCGGAGAGA	17	-	66336616-66336665	17qE1.1	Mus musculus ankyrin repeat domain 12 (Ankrd12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2900001A12Rik; mKIAA0874; ANCO-2; AV347965; GAC-1; AI447928	2900001A12Rik; mKIAA0874; ANCO-2; AV347965; GAC-1; AI447928
Mus musculus	RefSeq	ILMN_258504	ILMN_258504	ANKRD12	NM_001025572.1	NM_001025572.1		106585	71834682	NM_001025572.1	Ankrd12	NP_001020743.1	ILMN_3151492	004860008	A	1060	ACATGGAGAACGGCCAGTGGATGTGGCAGAGACAGAGGAGTTGGAGTTGC	17	-	66373463-66373512	17qE1.1	Mus musculus ankyrin repeat domain 12 (Ankrd12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2900001A12Rik; mKIAA0874; ANCO-2; AV347965; GAC-1; AI447928	2900001A12Rik; mKIAA0874; ANCO-2; AV347965; GAC-1; AI447928
Mus musculus	RefSeq	ILMN_258504	ILMN_258504	ANKRD12	NM_001025572.1	NM_001025572.1		106585	71834682	NM_001025572.1	Ankrd12	NP_001020743.1	ILMN_3072676	001450367	I	8624	CTCTGCCTGGACTCTGTACTACGCATTTCCTCTGCACGCCATCGGGATAG	17	-	66317158-66317207	17qE1.1	Mus musculus ankyrin repeat domain 12 (Ankrd12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2900001A12Rik; mKIAA0874; ANCO-2; AV347965; GAC-1; AI447928	2900001A12Rik; mKIAA0874; ANCO-2; AV347965; GAC-1; AI447928
Mus musculus	RefSeq	ILMN_238593	ILMN_238593	OLFR782	NM_001011797.1	NM_001011797.1		257985	58801359	NM_001011797.1	Olfr782	NP_001011797.1	ILMN_3161983	006060377	S	24	TGACTTTATTCTTTTGGGATTGACAGATGACCCACAACTGCAAATTGTGG	10	+	128787644-128787693	10qD3	Mus musculus olfactory receptor 782 (Olfr782), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR110-8	MOR110-8
Mus musculus	RefSeq	ILMN_197918	ILMN_197918	LOC231132	XM_132013.1	XM_132013.1			20825931	XM_132013.1	LOC231132		ILMN_2529824	006130487	S	1	GGAGCTGCCTCGAGCAAGCGAGTGAACAAGCGCACTGCCTCTCGCCCATG										
Mus musculus	MEEBO	ILMN_184857	ILMN_184857	MJ-5000-150_4562	MJ-5000-150_4562						MJ-5000-150_4562		ILMN_2422169	006840373	S	17	GCTGGCATAATTTTATCTGGTGGTAAGGGAGAGAGGATTGGTGGGAAAAA										
Mus musculus	RefSeq	ILMN_186598	ILMN_259008	DHRSX	NM_001033326.2	NM_001033326.2		236082	124244061	NM_001033326.2	Dhrsx	NP_001028498.2	ILMN_1221451	000430162	S	1174	GTGGGTCTTGCGCACGGTGAAGCGGTTCCTCGGGTGGCTCGTTTTCAAGA	4|NT_166291.1	+	34783-34831:35233-35233		Mus musculus dehydrogenase/reductase (SDR family) X chromosome (Dhrsx), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	C80877; Pscad; Dhrsxy	C80877; Pscad; Dhrsxy
Mus musculus	RefSeq	ILMN_259008	ILMN_259008	DHRSX	NM_001033326.2	NM_001033326.2		236082	124244061	NM_001033326.2	Dhrsx	NP_001028498.2	ILMN_2897020	003130139	S	1981	CTAGGATCGGACCTCACACAGCCGAGGTTTTACCCAACAGACTGGCACCG	4|NT_166291.1	+	35991-36040		Mus musculus dehydrogenase/reductase (SDR family) X chromosome (Dhrsx), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	C80877; Pscad; Dhrsxy	C80877; Pscad; Dhrsxy
Mus musculus	RefSeq	ILMN_198330	ILMN_198330	LOC225594	XM_140379.2	XM_140379.2			38083912	XM_140379.2	LOC225594		ILMN_2531301	004610022	S	1128	CCCCATCTGCTTTGGAATGGGCAAGGCATTTGTTGAAAGCACAATCACCC										
Mus musculus	MEEBO	ILMN_187902	ILMN_187902	LOC381232	scl078096.3_6				38085194	XM_358531	LOC381232		ILMN_1241016	002070338	S	642	CCAGAAGGTACAGGGTCATTCTCGGCCATATTTGCGGTTTGCGGCCAGCC										
Mus musculus	MEEBO	ILMN_187902	ILMN_187902	LOC381232	scl078096.3_6				38085194	XM_358531	LOC381232		ILMN_2494707	007200594	S	16	TTCTGACGTCCTTGCTCAAGGGGCTTTCGGGACAGGGGTACGCAGAGTTC										
Mus musculus	RefSeq	ILMN_209100	ILMN_209100	HFE	NM_010424.2	NM_010424.2		15216	31981696	NM_010424.2	Hfe	NP_034554.2	ILMN_2870696	002360672	S	1509	CGTTTCCACATCTGAAGAAGTTGTGAACCTTCATCCGGGGATGCTCACAC	13	-	23711469-23711518	13qA3.1	Mus musculus hemochromatosis (Hfe), mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions [goid 55072] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]		MGC151121; MR2; MGC151123	MGC151121; MR2; MGC151123
Mus musculus	MEEBO	ILMN_214869	ILMN_214869	HCR	scl50774.19.1_41				22122830	NM_146248	Hcr		ILMN_2752470	004040414	S	2176	GCGCCAGATCCAGCACAAAGCCACTCAGGAAAAGGAGCGCAACCAGGAGC										
Mus musculus	RefSeq	ILMN_216993	ILMN_216993	RPA3	NM_026632.3	NM_026632.3		68240	146141223	NM_026632.3	Rpa3	NP_080908.1	ILMN_1239806	002760255	S	231	AGTCACAGCCAAGGCGACCGTGCTCTGTGCATCTTATACCCTGTTTAAGG				6qA1	Mus musculus replication protein A3 (Rpa3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C330026P08Rik; 14kDa	C330026P08Rik; 14kDa
Mus musculus	RefSeq	ILMN_221139	ILMN_221139	5830403L16RIK	NM_178243.3	NM_178243.3		240817	113865982	NM_178243.3	5830403L16Rik	NP_839974.2	ILMN_1237653	005720192	S	838	GGTGCTGATGCGTGAACCTGGACGTGCTCAAGTGGTTTCCTATTGCCTGC	1	-	155697438-155697473:155697474-155697487	1qG3	Mus musculus RIKEN cDNA 5830403L16 gene (5830403L16Rik), mRNA.				e9-2; Me9; AJ554213	e9-2; Me9; AJ554213
Mus musculus	RefSeq	ILMN_224205	ILMN_238482	LOC545732	XR_001623.1	XR_001623.1		545732	94374228	XR_001623.1	LOC545732		ILMN_2776561	007650630	S	918	GGAGATACAGGCTGTAGGTCTATACTCCTTAACATGCAGTGAAAGGGTGC	5	+	11922558-11922607	5qA1	PREDICTED: Mus musculus Speer1-like (LOC545732), misc RNA.					
Mus musculus	RefSeq	ILMN_223131	ILMN_223131	EBF4	NM_152993.1	NM_152993.1		228598	23308719	NM_152993.1	Ebf4	NP_694538.1	ILMN_2759722	001850377	S	1981	AGGAGAGCATCGTAGGGAGGAGGTGTTGGGATGTCGGGCCTTACTACTGG	2	+	130195644-130195693	2qF1	Mus musculus early B-cell factor 4 (Ebf4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	O/E-4; Ebf3; Olf-1	O/E-4; Ebf3; Olf-1
Mus musculus	Riken	ILMN_205240	ILMN_205240	E230021B08RIK	ri|E230021B08|PX00210A01|AK054119|1632					AK054119	E230021B08Rik		ILMN_1243133	001070390	S	1503	CTGCCTCAGCTATAAGGTGGGAGAGAACAGAGTCCCCAAAAGGTGTCCTT										
Mus musculus	RefSeq	ILMN_195831	ILMN_236496	CECR2	XM_204234.6	XM_204234.6		330409	94378057	XM_204234.6	Cecr2	XP_204234.5	ILMN_2519129	002070674	S	917	TTCTTCTTCTGTTTGACACAGGAGCCACCAAGTACCTTGGCCTGGCCCTC	6	+	120688229-120688278	6qF1	PREDICTED: Mus musculus cat eye syndrome chromosome region, candidate 2 homolog (human), transcript variant 1 (Cecr2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_194502	ILMN_236496	CECR2	XM_204234.6	XM_204234.6		330409	94378057	XM_204234.6	Cecr2	XP_204234.5	ILMN_2683859	006550075	S	2853	CCTGGGAGTACACAGGAGATGACTGAAACACACGAGCCCGAGGAAGACCC	6	+	120708598-120708647	6qF1	PREDICTED: Mus musculus cat eye syndrome chromosome region, candidate 2 homolog (human), transcript variant 1 (Cecr2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_194502	ILMN_236496	CECR2	XM_204234.6	XM_204234.6		330409	94378057	XM_204234.6	Cecr2	XP_204234.5	ILMN_1241306	003290706	S	4825	GGGGAAGGGACTACTTGTAGTATTAATGTTTTTGGAGCTGGGTCCAGTTT	6	+	120716821-120716870	6qF1	PREDICTED: Mus musculus cat eye syndrome chromosome region, candidate 2 homolog (human), transcript variant 1 (Cecr2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218327	ILMN_218327	CALM4	NM_020036.4	NM_020036.4		80796	148352321	NM_020036.4	Calm4	NP_064420.2	ILMN_1219326	005550184	S	553	TGAGGAGTTTGTGCGCCTCCACGTTGAAAATTGAGACTGCTGGTCACAAG				13qA1	Mus musculus calmodulin 4 (Calm4), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	AI649108; Scarf; DD112; 2310037J09Rik	AI649108; Scarf; DD112; 2310037J09Rik
Mus musculus	RefSeq	ILMN_198811	ILMN_198811	LOC328272	XM_127403.2	XM_127403.2			38087901	XM_127403.2	LOC328272		ILMN_1217343	001070273	S	278	TTTCTGAGGAACCGCCAGACTGATTTCCTACCTGTCTTGTACAAGCTTGC										
Mus musculus	RefSeq	ILMN_210054	ILMN_210054	SLC35B3	NM_134060.3	NM_134060.3		108652	141802590	NM_134060.3	Slc35b3	NP_598821.1	ILMN_1246713	006370025	S	551	GTGGGTACTATGGGCTTATCAAACACTTCCTTGGGCTACCTGAATTACCC	13	-	39036434-39036483	13qA3.3	Mus musculus solute carrier family 35, member B3 (Slc35b3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AI428480; 4921526O06Rik; CGI-19	AI428480; 4921526O06Rik; CGI-19
Mus musculus	RefSeq	ILMN_223053	ILMN_253690	OLFR1066	NM_001011735.1	NM_001011735.1		257880	58801263	NM_001011735.1	Olfr1066	NP_001011735.1	ILMN_2758677	000840669	S	606	CTCAGCTTTTAATTTGCTTTCGTCTCTTCTTATAGTAATTGGGTCCTATC	2	-	86295771-86295820	2qD	Mus musculus olfactory receptor 1066 (Olfr1066), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR188-8; MOR256-52P	MOR188-8; MOR256-52P
Mus musculus	RefSeq	ILMN_259556	ILMN_259556	OTTMUSG00000010537	NM_001034101.2	NM_001034101.2		433779	113461987	NM_001034101.2	OTTMUSG00000010537	NP_001029273.2	ILMN_2938993	000730561	S	1843	TGCTCAGCTTGCAGGCAACCTCACTGTAGGACGCTATTCATTAGGGGCCC	4	+	143954093-143954142	4qE1	Mus musculus predicted gene, OTTMUSG00000010537 (OTTMUSG00000010537), mRNA.				MGC118154	MGC118154
Mus musculus	RefSeq	ILMN_200639	ILMN_200639	LOC384448	XM_357652.1	XM_357652.1			38084597	XM_357652.1	LOC384448		ILMN_2539474	002360044	S	675	CTCACACGACCAGCAACAACCTCGCACCCCACACGTGCCCGCACAGAGAA										
Mus musculus	RefSeq	ILMN_256222	ILMN_256222	MAF	NM_001025577.2	NM_001025577.2		17132	71480166	NM_001025577.2	Maf	NP_001020748.2	ILMN_3100322	006020735	A	1036	GCGCGAAAGGGACGCCTACAAGGAGAAATACGAGAAGCTGGTGAGCAACG	8	-	118229709-118229758	8qE1	Mus musculus avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog (Maf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of chondrocyte differentiation [goid 32330] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	c-maf; 2810401A20Rik; AW047063; A230108G15Rik	c-maf; 2810401A20Rik; AW047063; A230108G15Rik
Mus musculus	MEEBO	ILMN_195085	ILMN_195085	2610016A17RIK	scl52624.2.97_42						2610016A17Rik		ILMN_2512463	004260068	S	20	GGTTGTCGATTTCCTGGGCACGCGCTACAGTGGCGATGGATATCTGTTGA										
Mus musculus	Riken	ILMN_205274	ILMN_205274	E330036N11RIK	ri|E330036N11|PX00312L06|AK054523|2588					AK054523	E330036N11Rik		ILMN_1248333	000360521	S	2405	GTTCCATGATAGCTCCCCCCAACCAGATGTGTGCCAAGCTGAACACCCCC										
Mus musculus	RefSeq	ILMN_193683	ILMN_231942	RPS6KA5	NM_153587.2	NM_153587.2		73086	118130094	NM_153587.2	Rps6ka5	NP_705815.1	ILMN_1233577	002850110	S	3591	CGTGTTGTCTGATGACTCGTTTGCCACTTACGCACCCATCCGAGGGAAAG	12	-	101788753-101788802	12qE	Mus musculus ribosomal protein S6 kinase, polypeptide 5 (Rps6ka5), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	6330404E13Rik; RLPK; MSPK1; AI854034; MGC28385; 3110005L17Rik; MSK1	6330404E13Rik; RLPK; MSPK1; AI854034; MGC28385; 3110005L17Rik; MSK1
Mus musculus	RefSeq	ILMN_193683	ILMN_231942	RPS6KA5	NM_153587.2	NM_153587.2		73086	118130094	NM_153587.2	Rps6ka5	NP_705815.1	ILMN_2752748	004760079	S	4078	GTGTTAATGATAACCTCGTTAGCATTAGTTTGGAATTTGGACACTATACC	12	-	101788266-101788315	12qE	Mus musculus ribosomal protein S6 kinase, polypeptide 5 (Rps6ka5), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	6330404E13Rik; RLPK; MSPK1; AI854034; MGC28385; 3110005L17Rik; MSK1	6330404E13Rik; RLPK; MSPK1; AI854034; MGC28385; 3110005L17Rik; MSK1
Mus musculus	RefSeq	ILMN_204533	ILMN_231942	RPS6KA5	NM_153587.2	NM_153587.2		73086	118130094	NM_153587.2	Rps6ka5	NP_705815.1	ILMN_1234265	000270463	S	1912	CATGCGGAAGCTTGTGTCAGCTGTGAGCCACATGCACGATGTAGGAGTGG	12	-	101809061-101809110	12qE	Mus musculus ribosomal protein S6 kinase, polypeptide 5 (Rps6ka5), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	6330404E13Rik; RLPK; MSPK1; AI854034; MGC28385; 3110005L17Rik; MSK1	6330404E13Rik; RLPK; MSPK1; AI854034; MGC28385; 3110005L17Rik; MSK1
Mus musculus	Riken	ILMN_204648	ILMN_204648	8030405J07RIK	ri|8030405J07|PX00102P18|AK033090|2330					AK033090	8030405J07Rik		ILMN_1218593	004040086	S	2148	CCAGATTGGTGTGGCAGACTGATAGCTTGTGGGCCAGGTGCAGAGTCCAC										
Mus musculus	RefSeq	ILMN_201994	ILMN_255393	NAPG	NM_028017.1	NM_028017.1		108123	110625901	NM_028017.1	Napg	NP_082293.1	ILMN_1228922	006290594	S	1005	GGAGATGAGGAGATGAGGAGACGGGAATCCTGACACGCCGTTTTCGTGGA	18	+	63156627-63156676	18qE1	Mus musculus N-ethylmaleimide sensitive fusion protein attachment protein gamma (Napg), mRNA. XM_001000780 XM_001000787 XM_001002429 XM_001002439 XM_001002452 XM_901886 XM_923944 XM_923949 XM_923951 XM_923954 XM_923956 XM_984845	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	SNARE; 2400003O04Rik	SNARE; 2400003O04Rik
Mus musculus	RefSeq	ILMN_198337	ILMN_255393	NAPG	NM_028017.1	NM_028017.1		108123	110625901	NM_028017.1	Napg	NP_082293.1	ILMN_2677980	003420487	S	3247	CTCAGACTCACCTAGTGTTTAGTGCCCTTCTGTGTTGAGTGAAGTCAGCC	18	+	63158869-63158918	18qE1	Mus musculus N-ethylmaleimide sensitive fusion protein attachment protein gamma (Napg), mRNA. XM_001000780 XM_001000787 XM_001002429 XM_001002439 XM_001002452 XM_901886 XM_923944 XM_923949 XM_923951 XM_923954 XM_923956 XM_984845	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	SNARE; 2400003O04Rik	SNARE; 2400003O04Rik
Mus musculus	RefSeq	ILMN_255393	ILMN_255393	NAPG	NM_028017.1	NM_028017.1		108123	110625901	NM_028017.1	Napg	NP_082293.1	ILMN_2917424	002190521	S	3231	AGCCTGCATGGGTTTGCTCAGACTCACCTAGTGTTTAGTGCCCTTCTGTG	18	+	63158853-63158902	18qE1	Mus musculus N-ethylmaleimide sensitive fusion protein attachment protein gamma (Napg), mRNA. XM_001000780 XM_001000787 XM_001002429 XM_001002439 XM_001002452 XM_901886 XM_923944 XM_923949 XM_923951 XM_923954 XM_923956 XM_984845	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	SNARE; 2400003O04Rik	SNARE; 2400003O04Rik
Mus musculus	RefSeq	ILMN_215552	ILMN_318055	LOC100043257	XM_001480197.1	XM_001480197.1		100043257	149234329	XM_001480197.1	LOC100043257	XP_001480247.1	ILMN_1234453	000460100	S	219	GGGGTTTTGGCTTCATCACCTTCACAAACCCAGAGCATGCCTCAGATGCG	1	-	152112940-152112989	1qG1	PREDICTED: Mus musculus similar to RNA binding motif protein 3 (LOC100043257), mRNA.					
Mus musculus	RefSeq	ILMN_218116	ILMN_226585	MAZ	NM_010772.1	NM_010772.1		17188	114155152	NM_010772.1	Maz	NP_034902.1	ILMN_2709839	005560372	S	2100	GCCAGAGGCAGAACAAGAGAGATGGAATCTTAGGGGGCCAGGGCAAAGGA	7	-	134165872-134165921	7qF3	Mus musculus MYC-associated zinc finger protein (purine-binding transcription factor) (Maz), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	SAF-2; SAF-1; Pur-1; PUR1	SAF-2; SAF-1; Pur-1; PUR1
Mus musculus	RefSeq	ILMN_247007	ILMN_247007	CEACAM14	NM_025957.2	NM_025957.2		67084	27754107	NM_025957.2	Ceacam14	NP_080233.1	ILMN_2810744	003800253	S	970	GTACTCTCACTTGGGTTTGAGCCTTTAGTAAAAGACACACATCATGGGGC	7	+	16974095-16974144	7qA2	Mus musculus CEA-related cell adhesion molecule 14 (Ceacam14), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1600025E09Rik; 1600021E03Rik; AV033953	1600025E09Rik; 1600021E03Rik; AV033953
Mus musculus	RefSeq	ILMN_199484	ILMN_199484	LOC382602	XM_356590.1	XM_356590.1			38050538	XM_356590.1	LOC382602		ILMN_1214386	000780154	S	640	GAGGTGAGTACAAGCTATTCAGCAGGGCACAGAGCCAACCAGAGCTGTGC										
Mus musculus	RefSeq	ILMN_196029	ILMN_251367	PIAS1	NM_019663.3	NM_019663.3		56469	142361261	NM_019663.3	Pias1	NP_062637.2	ILMN_2737777	000050386	S	3767	CTTCCCCTACGCATGTGTGTTCCACACAGAAACGGCTGTGTTAGAGTCAC	9	-	62727922-62727971	9qB	Mus musculus protein inhibitor of activated STAT 1 (Pias1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2900068C24Rik; Ddxbp1; GBP	2900068C24Rik; Ddxbp1; GBP
Mus musculus	RefSeq	ILMN_220812	ILMN_220812	CD300A	NM_170758.2	NM_170758.2		217303	31542171	NM_170758.2	Cd300a	NP_739564.1	ILMN_2887986	002490097	S	4536	CCAAGTATACAGAGTTGTCCTCTGACCTCCACACCATGGCACAGGAGCCC	11	+	114720635-114720684	11qE2	Mus musculus CD300A antigen (Cd300a), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any phosphatase [goid 19902] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	mcpir1; Pigr4; MAIR-Ia; MMAC8; LMIR1; B230315M08Rik; Clm8	mcpir1; Pigr4; MAIR-Ia; MMAC8; LMIR1; B230315M08Rik; Clm8
Mus musculus	RefSeq	ILMN_220812	ILMN_220812	CD300A	NM_170758.2	NM_170758.2		217303	31542171	NM_170758.2	Cd300a	NP_739564.1	ILMN_2887983	000130706	S	4334	GGTAAAGAGTGGCCATCAGGGCTGGAGAGGAGGCTCAGTGGGTGAAAGTG	11	+	114720433-114720482	11qE2	Mus musculus CD300A antigen (Cd300a), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any phosphatase [goid 19902] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	mcpir1; Pigr4; MAIR-Ia; MMAC8; LMIR1; B230315M08Rik; Clm8	mcpir1; Pigr4; MAIR-Ia; MMAC8; LMIR1; B230315M08Rik; Clm8
Mus musculus	RefSeq	ILMN_221197	ILMN_316567	LOC100048703	XM_001480914.1	XM_001480914.1		100048703	149249735	XM_001480914.1	LOC100048703	XP_001480964.1	ILMN_2732276	002190524	S	534	CTCAACCAGGCTACGCTCAGGACTTGGACCAATAGAAGGGCAACCCCATC					PREDICTED: Mus musculus hypothetical protein LOC100048703 (LOC100048703), mRNA.					
Mus musculus	RefSeq	ILMN_236867	ILMN_236867	CCNB3	NM_183015.1	NM_183015.1		209091	33942086	NM_183015.1	Ccnb3	NP_898836.1	ILMN_2863768	002810475	S	4305	GTGCATTATTCCACTGAGGACCTCTGACAGCAGTTGTCAGGGCTGGGCAG	X	-	6136810-6136844:6136845-6136859	XqA1.1	Mus musculus cyclin B3 (Ccnb3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]			
Mus musculus	MEEBO	ILMN_218924	ILMN_218924	FBS1	scl32034.11_441	XM_284344.2			38087431	XM_284344.2	Fbs1		ILMN_2702002	004920528	S	3178	CCCTACTTCCAGATGGGTGAGTTGTTTAATGATGCGTGTTGGTGTTTTTC										
Mus musculus	Riken	ILMN_203340	ILMN_203340	4930565A21RIK	ri|4930565A21|PX00035F13|AK029796|3865					AK029796	4930565A21Rik		ILMN_2556557	005290400	S	3624	TGGGCTCGGGAGGGAGGTACCATGTCAGGAGCAAATGTCCCCAGACTGAT										
Mus musculus	RefSeq	ILMN_223579	ILMN_223579	DIO2	NM_010050.2	NM_010050.2		13371	132566530	NM_010050.2	Dio2	NP_034180.1	ILMN_2771979	001660129	S	5724	AAGAGTGTTATAATATTGGTGCTGAGTGGTATGTGTGCTTTTACAACTTG	12	-	91963033-91963082	12qD3	Mus musculus deiodinase, iodothyronine, type II (Dio2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42404] [evidence IMP]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3,5,3'-L-triiodo-L-thyronine + iodide + acceptor + H+ = L-thyroxine + donor-H2 [goid 4800] [evidence IMP]	DIOII; 5DII; AI324267	DIOII; 5DII; AI324267
Mus musculus	RefSeq	ILMN_223579	ILMN_223579	DIO2	NM_010050.2	NM_010050.2		13371	132566530	NM_010050.2	Dio2	NP_034180.1	ILMN_2766037	007610438	S	41	CCCCCTCCCAACCTTCCCCTTGGTCCCCCACTTCTCTACCACCACCTTCC	12	-	91976788-91976837	12qD3	Mus musculus deiodinase, iodothyronine, type II (Dio2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42404] [evidence IMP]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3,5,3'-L-triiodo-L-thyronine + iodide + acceptor + H+ = L-thyroxine + donor-H2 [goid 4800] [evidence IMP]	DIOII; 5DII; AI324267	DIOII; 5DII; AI324267
Mus musculus	RefSeq	ILMN_210468	ILMN_210468	SH2B3	NM_008507.2	NM_008507.2		16923	34328140	NM_008507.2	Sh2b3	NP_032533.1	ILMN_2822523	002850497	S	24	GCCTGGCCGCTCTCCAGCCCAGACTGTCACGGGCCACACGGGGTCCACAT	5	-	122097345-122097394	5qF	Mus musculus SH2B adaptor protein 3 (Sh2b3), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IDA]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IDA]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI429800; Lnk	AI429800; Lnk
Mus musculus	RefSeq	ILMN_210468	ILMN_210468	SH2B3	NM_008507.2	NM_008507.2		16923	34328140	NM_008507.2	Sh2b3	NP_032533.1	ILMN_2721065	000240554	S	865	CTGGTGCTTCGGTCTCCAGGTCCGGGCCACAGCCACTTTCTGCAGCTCTT	5	-	122089031-122089080	5qF	Mus musculus SH2B adaptor protein 3 (Sh2b3), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IDA]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IDA]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI429800; Lnk	AI429800; Lnk
Mus musculus	RefSeq	ILMN_199584	ILMN_199584	LOC382760	XM_356663.1	XM_356663.1			38074720	XM_356663.1	LOC382760		ILMN_2535747	007650551	S	295	ATGGTCACAGAGCTACCTGTGGTCTCAGAGCTGCCCATGGTCGCAGTGCT										
Mus musculus	RefSeq	ILMN_200572	ILMN_200572	LOC383365	XM_357010.1	XM_357010.1			38083836	XM_357010.1	LOC383365		ILMN_1234762	001980673	S	807	TTTTCAAGCCCCAGCTGTGCAGGGCATAGAGGCAGAGAAGCATGAGGGCG										
Mus musculus	RefSeq	ILMN_215723	ILMN_215723	MGL1	NM_010796.2	NM_010796.2		17312	118130155	NM_010796.2	Mgl1	NP_034926.1	ILMN_1249486	001740546	S	1258	GGTTGCTGAAATCTGTGATATTTTGTACAGTGTGCAGCTTATTGTAGGCA	11	+	69983244-69983293	11qB3	Mus musculus macrophage galactose N-acetyl-galactosamine specific lectin 1 (Mgl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Mgl	Mgl
Mus musculus	RefSeq	ILMN_255379	ILMN_255379	NPM3-PS1	NR_002702.1	NR_002702.1		108176	84794553	NR_002702.1	Npm3-ps1		ILMN_2965417	005720521	S	742	ACCTCTTCTGACCCACCTAACCCAGATTCAGTCCCCAGCACTGCAAAAAA	6	+	85026876-85026925	6qC3	Mus musculus nucleoplasmin 3, pseudogene 1 (Npm3-ps1), non-coding RNA.					
Mus musculus	RefSeq	ILMN_217876	ILMN_255379	NPM3-PS1	NR_002702.1	NR_002702.1		108176	84794553	NR_002702.1	Npm3-ps1		ILMN_2688681	007210709	S	428	CCGGTTCTGGCCCAGTTCGGATCACTGGCCGGCATCAGATCGTTTGTATA	6	+	85026562-85026611	6qC3	Mus musculus nucleoplasmin 3, pseudogene 1 (Npm3-ps1), non-coding RNA.					
Mus musculus	Riken	ILMN_205320	ILMN_205320	9630018J20RIK	ri|9630018J20|PX00116E19|AK035927|3249					AK035927	9630018J20Rik		ILMN_1243974	003370142	S	3178	AACTGAGAAGGGCACATAGACCCTGAGCAGAGATTCCCATCTTGGGTGCC										
Mus musculus	RefSeq	ILMN_198978	ILMN_198978	LOC235243	XM_146770.3	XM_146770.3			38090299	XM_146770.3	LOC235243		ILMN_2533611	002510494	S	777	CTTACAGCCTTCATCAGTGAGTTTGGTGGACCAAGGGAAAGTGTCCTCTG										
Mus musculus	RefSeq	ILMN_228907	ILMN_228907	OLFR1328	NM_207570.1	NM_207570.1		404333	46430597	NM_207570.1	Olfr1328	NP_997453.1	ILMN_2867960	000110020	S	104	TTTACCTGAGCTCAGTCCTGGGCAATGGGCTCATCATCCTGCTGGTCTGC					Mus musculus olfactory receptor 1328 (Olfr1328), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC129205; MOR259-13	MGC129205; MOR259-13
Mus musculus	RefSeq	ILMN_217775	ILMN_228907	OLFR1328	NM_207570.1	NM_207570.1		404333	46430597	NM_207570.1	Olfr1328	NP_997453.1	ILMN_1247272	002030326	S	888	GGACATCAAGAGGGCATTTCTCAAGGTGATGGGACATAGTAGGCTGGACC					Mus musculus olfactory receptor 1328 (Olfr1328), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC129205; MOR259-13	MGC129205; MOR259-13
Mus musculus	RefSeq	ILMN_217069	ILMN_217069	PPP2CB	NM_017374.3	NM_017374.3		19053	119672926	NM_017374.3	Ppp2cb	NP_059070.1	ILMN_2678773	006380484	S	1078	GTGCGCCCAATTACTGCTACCGTTGTGGGAACCAGGCTGCTATCATGGAA	8	+	34727542-34727591	8qA4	Mus musculus protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform (Ppp2cb), mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus [goid 42221] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI115466; D8Ertd766e; PP2Ac	AI115466; D8Ertd766e; PP2Ac
Mus musculus	RefSeq	ILMN_216408	ILMN_216408	1110008F13RIK	NM_026124.1	NM_026124.1		67388	13385629	NM_026124.1	1110008F13Rik	NP_080400.1	ILMN_2919489	001450100	S	440	ACTACCTACAAATCGACGAGGAAGAATATGGGGGCACGTGGGAGCTCACC	2	+	156563824-156563873	2qH1	Mus musculus RIKEN cDNA 1110008F13 gene (1110008F13Rik), mRNA.				AI316789	AI316789
Mus musculus	RefSeq	ILMN_186968	ILMN_229900	PCM1	NM_023662.2	NM_023662.2		18536	141803348	NM_023662.2	Pcm1	NP_076151.1	ILMN_2664813	002630673	S	6417	GCTAATTTCTGCCCATGGCAGTTTAAAACATTAGAATCTGAATCCTGGAC	8	+	42417491-42417540	8qA4	Mus musculus pericentriolar material 1 (Pcm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]			2600002H09Rik; 9430077F19Rik; C030044G17Rik	2600002H09Rik; 9430077F19Rik; C030044G17Rik
Mus musculus	RefSeq	ILMN_186968	ILMN_229900	PCM1	NM_023662.2	NM_023662.2		18536	141803348	NM_023662.2	Pcm1	NP_076151.1	ILMN_2601618	002450382	S	4165	TCTAGCACATGTGAACCTTGCAAAAATAGGAACAGACATTCAGCCCAGAC	8	+	42389361-42389410	8qA4	Mus musculus pericentriolar material 1 (Pcm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]			2600002H09Rik; 9430077F19Rik; C030044G17Rik	2600002H09Rik; 9430077F19Rik; C030044G17Rik
Mus musculus	RefSeq	ILMN_218287	ILMN_248089	MYOZ3	XM_994101.1	XM_994101.1		170947	94405570	XM_994101.1	Myoz3	XP_999195.1	ILMN_1226637	004230575	S	424	AAGGGCGTCCCACCGGAGAAGTTCAACCACACGGCCATCCCCAAAGGCTA				18qD3	PREDICTED: Mus musculus myozenin 3 (Myoz3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209352	ILMN_209352	SCOTIN	NM_025858.1	NM_025858.1		66940	21703697	NM_025858.1	Scotin	NP_080134.1	ILMN_2651076	001260673	S	1566	GTACCACAGTCCAGTTTGTCCCAGTAGCAGGGACACCAAGGCCAATGGGT	9	+	108914904-108914953	9qF2	Mus musculus scotin gene (Scotin), transcript variant 1, mRNA.				6430628I05Rik; 2310008D10Rik	6430628I05Rik; 2310008D10Rik
Mus musculus	RefSeq	ILMN_223784	ILMN_223784	GAST	NM_010257.2	NM_010257.2		14459	31981774	NM_010257.2	Gast	NP_034387.2	ILMN_1241636	004070079	S	308	AAGAGGCCTACGGATGGATGGACTTTGGCCGCCGCAGTGCTGAGGAAGAC	11	+	100198158-100198207	11qD	Mus musculus gastrin (Gast), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	GAS	GAS
Mus musculus	RefSeq	ILMN_230537	ILMN_230537	NAT2	NM_010874.2	NM_010874.2		17961	31981606	NM_010874.2	Nat2	NP_035004.1	ILMN_2994380	001710451	S	1087	TGGTGGTCATGTTGATGTGTGCTAGGAAATACCCAGCATTGGCTTACAGC	8	+	70026093-70026142	8qB3.3	Mus musculus N-acetyltransferase 2 (arylamine N-acetyltransferase) (Nat2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [evidence IMP]; Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [evidence IDA]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IEA]	AV377607	AV377607
Mus musculus	RefSeq	ILMN_221582	ILMN_233155	CCDC88B	NM_001081291.1	NM_001081291.1		78317	124486838	NM_001081291.1	Ccdc88b	NP_001074760.1	ILMN_2737463	001470079	S	4903	GAGCATTGTCTGGGACACGAGGGAAAGAAGAATAAAGCTGAAACCCCTTG	19	-	6919119-6919168	19qA	Mus musculus coiled-coil domain containing 88B (Ccdc88b), mRNA.				Ccdc88; 2610041P08Rik	Ccdc88; 2610041P08Rik
Mus musculus	RefSeq	ILMN_198395	ILMN_233155	CCDC88B	NM_001081291.1	NM_001081291.1		78317	124486838	NM_001081291.1	Ccdc88b	NP_001074760.1	ILMN_2531534	004210286	S	923	AGCAACTGCTGGACTCCCAGGCCGAGGTGCAGGGCTTGGAGGCTGAAATT	19	-	6930159-6930208	19qA	Mus musculus coiled-coil domain containing 88B (Ccdc88b), mRNA.				Ccdc88; 2610041P08Rik	Ccdc88; 2610041P08Rik
Mus musculus	MEEBO	ILMN_193640	ILMN_193640	1700091H14RIK	scl0073553.1_280				51789127	XM_486484	1700091H14Rik		ILMN_2499081	007100735	S	10	ATTATCTTTTCGTTACTGTAATTAATTTGCTTTTTTAGCTAAATCTATAT										
Mus musculus	Riken	ILMN_201787	ILMN_201787	2310047C04RIK	ri|2310047C04|ZX00054P11|AK009865|617					AK009865	2310047C04Rik		ILMN_1252151	003800482	S	478	CGGTAGGATTTGTCAGAACCCCCCATAGAGAGAGAGCATCCCGGAGTCGC										
Mus musculus	RefSeq	ILMN_214504	ILMN_214504	SELL	NM_011346.1	NM_011346.1		20343	6755453	NM_011346.1	Sell	NP_035476.1	ILMN_3009860	005360707	S	1980	ATGAAGACAACAGGTAGAAAAATTCCTGGGCTCAGGCTGGAGTGACACCC	1	+	166010603-166010652	1qH2.2	Mus musculus selectin, lymphocyte (Sell), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI528707; LECAM-1; Lyam1; Ly-22; Ly-m22; L-selectin; CD62L; Lyam-1; Lnhr	AI528707; LECAM-1; Lyam1; Ly-22; Ly-m22; L-selectin; CD62L; Lyam-1; Lnhr
Mus musculus	RefSeq	ILMN_213673	ILMN_213673	GEMIN5	NM_172558.2	NM_172558.2		216766	142350379	NM_172558.2	Gemin5	NP_766146.1	ILMN_2639543	006550561	S	4617	CGGAAGGATGCTGTGATCCAACTGACAGATGAGGGTGAAGTTTGAATCCA	11	-	57934981-57935030	11qB1.3	Mus musculus gem (nuclear organelle) associated protein 5 (Gemin5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AA407208; C330013N08; AA407055; BB194447; AI451603	AA407208; C330013N08; AA407055; BB194447; AI451603
Mus musculus	MEEBO	ILMN_193604	ILMN_193604	E030024M20RIK	scl0319426.2_17						E030024M20Rik		ILMN_2498731	004880280	S	20	GCTCCCTTGCCTCCAGGTGTTGGTCTTCCAGGTGTATACCCAGGCGGAGT										
Mus musculus	MEEBO	ILMN_184900	ILMN_184900	4933433J03RIK	scl071304.3_15						4933433J03Rik		ILMN_2422529	005860349	S	5	CACTCAAAAGGAACCCGGAGCCTTCTCTCCCAAAGCAGCTACCCACCTTC										
Mus musculus	RefSeq	ILMN_215478	ILMN_215478	CCDC101	NM_029339.2	NM_029339.2		75565	31981319	NM_029339.2	Ccdc101	NP_083615.2	ILMN_2660028	004490414	S	993	GAGCCCAAGAAAAAGTGAATCGGGCTGGTAGGCTTGAATCTGCCACTGCC	7	+	133816182-133816200:133816201-133816231	7qF3	Mus musculus coiled-coil domain containing 101 (Ccdc101), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		9530025I05Rik; 1700023O11Rik	9530025I05Rik; 1700023O11Rik
Mus musculus	RefSeq	ILMN_210116	ILMN_210116	NR1D2	NM_011584.3	NM_011584.3		353187	142367557	NM_011584.3	Nr1d2	NP_035714.2	ILMN_2602387	004730019	S	3783	ACCAGAACTGTTAGTATTGCTTGTGATGCTTTAGTTAGGGTTAGTATATA	14	-	19037263-19037312	14qA2	Mus musculus nuclear receptor subfamily 1, group D, member 2 (Nr1d2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with thyroid hormone to initiate a change in cell activity [goid 4887] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Rev-erb; RVR	Rev-erb; RVR
Mus musculus	RefSeq	ILMN_197142	ILMN_197142	LOC332433	XM_284782.2	XM_284782.2			38074278	XM_284782.2	LOC332433		ILMN_2527062	003190286	S	5921	TGAAGCAGACCTTCAAGCAGGGTGGGAGCACATGCATTCGGCTTGGAGAC										
Mus musculus	RefSeq	ILMN_189946	ILMN_189946	VCP	NM_009503.3	NM_009503.3		269523	142369659	NM_009503.3	Vcp	NP_033529.2	ILMN_1255736	003460239	S	2753	GACCAGGGGTGTGCCCATGGCCTGTTCCATTCCTCAGTCTGAACAGTTCA	4	-	42996810-42996859	4qA5	Mus musculus valosin containing protein (Vcp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IDA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	3110001E05; p97; p97/VCP; CDC48	3110001E05; p97; p97/VCP; CDC48
Mus musculus	RefSeq	ILMN_187344	ILMN_241429	PAQR8	NM_028829.3	NM_028829.3		74229	40254345	NM_028829.3	Paqr8	NP_083105.3	ILMN_2624553	006480646	S	4262	GTCACCCTGCAAAATCAGCATAATGTTTAAAAAGGTATAAGGGAGATAGT	1	+	20928679-20928728	1qA4	Mus musculus progestin and adipoQ receptor family member VIII (Paqr8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	3110001D06Rik; 1700019B16Rik	3110001D06Rik; 1700019B16Rik
Mus musculus	MEEBO	ILMN_211368	ILMN_211368	PMP47	scl0058177.1_183	NM_021376.1			10946711	NM_021376.1	Pmp47		ILMN_1215551	002030273	S	1292	CCCAGGTTCCAGACGACACGGTAACCATTCTCCTCAGATACTCCTCTAGG										
Mus musculus	Riken	ILMN_203270	ILMN_203270	9430006N12RIK	ri|9430006N12|PX00107N20|AK034564|1586					AK034564	9430006N12Rik		ILMN_1238190	006370619	S	1275	CTAGGTGAGGGATCATCAGGACAAGAGGTGACACTGGGCTGGAGTCTGGG										
Mus musculus	RefSeq	ILMN_191472	ILMN_259997	4933426G20RIK	XR_001561.1	XR_001561.1		74460	94398705	XR_001561.1	4933426G20Rik		ILMN_1246475	004010551	S	1056	GAGTGAACCCCAGCGTTGCCTGTTGGCCCAGTCCATAGAGAGACAAATCC	15	+	63753779-63753828	15qD1	PREDICTED: Mus musculus RIKEN cDNA 4933426G20 gene (4933426G20Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_210264	ILMN_210264	HTATIP2	NM_016865.2	NM_016865.2		53415	24475634	NM_016865.2	Htatip2	NP_058561.1	ILMN_2603834	002340382	S	748	AGTGGGTACGCTGTGCCTGTGGTGACGGTGGTTAGAGCGATGCTGAACAA	7	+	57028755-57028804	7qB5	Mus musculus HIV-1 tat interactive protein 2, homolog (human) (Htatip2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISS]; The directed movement of substances into the nucleus [goid 51170] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter during mitosis [goid 46022] [evidence ISO]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43068] [evidence ISO]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	CC3; AW111545; 30kDa; TIP30	CC3; AW111545; 30kDa; TIP30
Mus musculus	RefSeq	ILMN_210264	ILMN_210264	HTATIP2	NM_016865.2	NM_016865.2		53415	24475634	NM_016865.2	Htatip2	NP_058561.1	ILMN_2603837	002710152	S	746	CCAGTGGGTACGCTGTGCCTGTGGTGACGGTGGTTAGAGCGATGCTGAAC	7	+	57028753-57028802	7qB5	Mus musculus HIV-1 tat interactive protein 2, homolog (human) (Htatip2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISS]; The directed movement of substances into the nucleus [goid 51170] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter during mitosis [goid 46022] [evidence ISO]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43068] [evidence ISO]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	CC3; AW111545; 30kDa; TIP30	CC3; AW111545; 30kDa; TIP30
Mus musculus	RefSeq	ILMN_200156	ILMN_200156	LOC385822	XM_358959.1	XM_358959.1			38080726	XM_358959.1	LOC385822		ILMN_1223936	006370603	S	214	AGTGGTCCGCTGGCCATGGTGGGCTCTGCAATGATGGGGCGCATCCTGTT										
Mus musculus	MEEBO	ILMN_194451	ILMN_194451	1110035H17RIK	scl9642.1.1_294						1110035H17Rik		ILMN_2506537	000580725	S	6	GGGGTTGACTCCATTTGCCAGCTAATGTTTCTGCCAAACTGGTTTTTTCC										
Mus musculus	RefSeq	ILMN_215287	ILMN_229701	GPRC2A-RS1	XM_913765.3	XM_913765.3		110931	149257098	XM_913765.3	Gprc2a-rs1	XP_918858.3	ILMN_2657645	006840747	S	2192	GGTTAATGATATCAAGAGCCCCTAATTTCATCATTCCCATCTGCACACTA				7qB3	PREDICTED: Mus musculus G protein-coupled receptor, family C, group 2, member A, related sequence 1 (Gprc2a-rs1), mRNA.					
Mus musculus	RefSeq	ILMN_232176	ILMN_232176	OLFR1338	NM_207152.1	NM_207152.1		258259	46391060	NM_207152.1	Olfr1338	NP_997035.1	ILMN_2903964	002970379	S	663	CATTACCAAGGCAATTCTCAAGATCAAGTCCACCCAGGCCCGCTGTAAAT	4	-	118426429-118426478	4qD2.1	Mus musculus olfactory receptor 1338 (Olfr1338), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR259-9	MOR259-9
Mus musculus	RefSeq	ILMN_215828	ILMN_215828	MRPL38	NM_024177.3	NM_024177.3		60441	124430534	NM_024177.3	Mrpl38	NP_077139.2	ILMN_2664049	006380102	S	1339	CTCTCCCAGGACACCCAGGGGCTTGTGGATGTGCCTCGATTCTATGTGAA	11	-	115993153-115993202	11qE2	Mus musculus mitochondrial ribosomal protein L38 (Mrpl38), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence ISS]			4733401F03Rik; R75240; Rpml3; MGC8310; MGC41062; 1110036N21Rik; MRP-L3	4733401F03Rik; R75240; Rpml3; MGC8310; MGC41062; 1110036N21Rik; MRP-L3
Mus musculus	RefSeq	ILMN_189911	ILMN_189911	WEE1	NM_009516.3	NM_009516.3		22390	114431231	NM_009516.3	Wee1	NP_033542.2	ILMN_1228358	002120600	S	3283	GGAGGGAAATGTCTCACTTGTTTTCCTATTAACTTTGGTCTGAAACACAT	7	+	117278303-117278352	7qF1	Mus musculus WEE 1 homolog (S. pombe) (Wee1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197795	ILMN_197795	LOC331139	XM_284587.2	XM_284587.2			38078272	XM_284587.2	LOC331139		ILMN_2529392	004070072	S	3356	TCTCAGTATTAGGCAACTCCCGCCATTGCCCTCGGCACTGTCCTAGGTTG										
Mus musculus	Riken	ILMN_202423	ILMN_202423	2010204K13RIK	ri|2010204K13|ZX00044C16|AK008437|538					AK008437	2010204K13Rik		ILMN_1246382	001110639	S	36	GAGACTCGAGCTTCCTCCAAGTTTGGACCTTAGTGGGCCGGATGATTTGG										
Mus musculus	Riken	ILMN_203660	ILMN_203660	9430050L06RIK	ri|9430050L06|PX00109I20|AK034865|2372					AK034865	9430050L06Rik		ILMN_2559002	003180270	S	2166	TCACTTGCTCGTCAGTGAGAGTTGAGATTTAGTTGCTGTGGTCGATCAGC										
Mus musculus	RefSeq	ILMN_212427	ILMN_212427	RBM18	NM_026434.2	NM_026434.2		67889	31541853	NM_026434.2	Rbm18	NP_080710.1	ILMN_2978585	005900017	S	2259	CCTTAAGTTCTCAAAGGGTTGTGGTGGAGTAGAATTTGATGCCAATAGCC	2	-	35938234-35938283	2qB	Mus musculus RNA binding motif protein 18 (Rbm18), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AU015530; 2010004P11Rik	AU015530; 2010004P11Rik
Mus musculus	RefSeq	ILMN_215676	ILMN_215676	ACSM2	NM_146197.3	NM_146197.3		233799	141802373	NM_146197.3	Acsm2	NP_666309.1	ILMN_2662329	002100017	S	1906	CGTCTCCACTTATGGAGATATAAGATTATTCACACAGAGGCACGTATGTG	7	+	126739590-126739639	7qF2	Mus musculus acyl-CoA synthetase medium-chain family member 2 (Acsm2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC031140; MGC37245; AI315615	BC031140; MGC37245; AI315615
Mus musculus	RefSeq	ILMN_216298	ILMN_216298	ELF5	NM_010125.2	NM_010125.2		13711	141802240	NM_010125.2	Elf5	NP_034255.1	ILMN_2736380	003460424	S	1759	TACCAAGCAGAGAACGTCCTAACAAGCCACGATAGCCGAACACAGCATCG	2	+	103290698-103290747	2qE2	Mus musculus E74-like factor 5 (Elf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	ESE-5	ESE-5
Mus musculus	RefSeq	ILMN_216298	ILMN_216298	ELF5	NM_010125.2	NM_010125.2		13711	141802240	NM_010125.2	Elf5	NP_034255.1	ILMN_2669510	001090603	S	21	TTTATTTCTACAGTCCGCTGGTGCTGGGAGCGCGCTTGCCTTCTCTTGCC	2	+	103264254-103264303	2qE2	Mus musculus E74-like factor 5 (Elf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	ESE-5	ESE-5
Mus musculus	Riken	ILMN_202505	ILMN_202505	HBB-BH1	ri|2810003C03|ZX00064H17|AK012654|716					AK012654	Hbb-bh1		ILMN_2550129	001170475	S	543	GATTTGGGTGCAGATTTGAGTGAGCTCCCAGCATTTCTGGGGCCTTGGGT						An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IEA]	The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]		
Mus musculus	Riken	ILMN_201912	ILMN_201912	ICA1	ri|4933430B13|PX00021C04|AK016989|1258					AK016989	Ica1		ILMN_1249584	004780435	S	1016	ATGGATCCAGGGCAGGCGACAGCCACAGAGGAGTCAAGTGGCTTTTCCCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence NAS]			
Mus musculus	RefSeq	ILMN_201497	ILMN_201497	LOC385260	XM_358156.1	XM_358156.1			38094803	XM_358156.1	LOC385260		ILMN_1228552	003450672	S	243	ATGGCGGCTCACCCGCTGGCAGCAGTTCATGCGCCTTAAGGGAATCAGTC										
Mus musculus	RefSeq	ILMN_191970	ILMN_234282	SLC7A2	NM_001044740.1	NM_001044740.1		11988	113680232	NM_001044740.1	Slc7a2	NP_001038205.1	ILMN_2483836	001050435	S	70	TCCAACCTTCGCGAGCTTGGAATCCGCAGAGCGCTGCAGCCTCTCGCTCG	8	+	41947816-41947865	8qA4	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 (Slc7a2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IMP]; The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of, within or between cells [goid 15819] [evidence IDA]; The directed movement of ornithine, 2,5-diaminopentanoic acid, into, out of, within or between cells [goid 15822] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The synthesis or release of nitric oxide following a stimulus during an acute inflammatory response, resulting in an increase in its intracellular or extracellular levels [goid 2537] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IMP]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence IMP]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IMP]; Catalysis of the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid [goid 15189] [evidence IDA]; Catalysis of the transfer of L-ornithine from one side of a membrane to the other. L-ornithine is 2,5-diaminopentanoic acid [goid 64] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the transfer of arginine from one side of a membrane to the other. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 5289] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IMP]	Tea; Atrc2; Cat2	Tea; Atrc2; Cat2
Mus musculus	RefSeq	ILMN_191970	ILMN_234282	SLC7A2	NM_001044740.1	NM_001044740.1		11988	113680232	NM_001044740.1	Slc7a2	NP_001038205.1	ILMN_2642349	005960221	S	3034	CAGACCTAATCACAGCTCAGCGTCTGCTCCTTCATCACAGAACCCAGTCT	8	+	42002764-42002813	8qA4	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 (Slc7a2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IMP]; The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of, within or between cells [goid 15819] [evidence IDA]; The directed movement of ornithine, 2,5-diaminopentanoic acid, into, out of, within or between cells [goid 15822] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The synthesis or release of nitric oxide following a stimulus during an acute inflammatory response, resulting in an increase in its intracellular or extracellular levels [goid 2537] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IMP]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence IMP]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IMP]; Catalysis of the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid [goid 15189] [evidence IDA]; Catalysis of the transfer of L-ornithine from one side of a membrane to the other. L-ornithine is 2,5-diaminopentanoic acid [goid 64] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the transfer of arginine from one side of a membrane to the other. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 5289] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IMP]	Tea; Atrc2; Cat2	Tea; Atrc2; Cat2
Mus musculus	RefSeq	ILMN_191970	ILMN_234282	SLC7A2	NM_001044740.1	NM_001044740.1		11988	113680232	NM_001044740.1	Slc7a2	NP_001038205.1	ILMN_2770725	002970315	S	2081	GCCATGCAAGCAAATGACCATCACCAAAGAAACCTCAGCTTACCTTTCAT	8	+	42001811-42001860	8qA4	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 (Slc7a2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IMP]; The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of, within or between cells [goid 15819] [evidence IDA]; The directed movement of ornithine, 2,5-diaminopentanoic acid, into, out of, within or between cells [goid 15822] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The synthesis or release of nitric oxide following a stimulus during an acute inflammatory response, resulting in an increase in its intracellular or extracellular levels [goid 2537] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IMP]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence IMP]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IMP]; Catalysis of the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid [goid 15189] [evidence IDA]; Catalysis of the transfer of L-ornithine from one side of a membrane to the other. L-ornithine is 2,5-diaminopentanoic acid [goid 64] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the transfer of arginine from one side of a membrane to the other. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 5289] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IMP]	Tea; Atrc2; Cat2	Tea; Atrc2; Cat2
Mus musculus	RefSeq	ILMN_191202	ILMN_234282	SLC7A2	NM_001044740.1	NM_001044740.1		11988	113680232	NM_001044740.1	Slc7a2	NP_001038205.1	ILMN_1219442	000150328	S	1321	CAATTCCAAAACGAAGACACCAGTAATTGCTACTTTGTCGTCGGGTGCAG	8	+	41993494-41993543	8qA4	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 (Slc7a2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IMP]; The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of, within or between cells [goid 15819] [evidence IDA]; The directed movement of ornithine, 2,5-diaminopentanoic acid, into, out of, within or between cells [goid 15822] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The synthesis or release of nitric oxide following a stimulus during an acute inflammatory response, resulting in an increase in its intracellular or extracellular levels [goid 2537] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IMP]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence IMP]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IMP]; Catalysis of the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid [goid 15189] [evidence IDA]; Catalysis of the transfer of L-ornithine from one side of a membrane to the other. L-ornithine is 2,5-diaminopentanoic acid [goid 64] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the transfer of arginine from one side of a membrane to the other. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 5289] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IMP]	Tea; Atrc2; Cat2	Tea; Atrc2; Cat2
Mus musculus	Riken	ILMN_202179	ILMN_202179	1700031F13RIK	ri|1700031F13|ZX00074I10|AK006580|652					AK006580	1700031F13Rik		ILMN_1257676	001990240	S	486	GGCTGTCGAAAGAAGAGGTGGCTGCGTAAGTGTGGCCTCTTAAAGGCACT										
Mus musculus	Riken	ILMN_202013	ILMN_202013	2610011C24RIK	ri|2610011C24|ZX00045A05|AK011373|2113					AK011373	2610011C24Rik		ILMN_1242247	004120156	S	1	GAGGGAGGCTCACGGCGGCCGCGTGAACCAGAGACGCGCGGGTCCGAGTT										
Mus musculus	Riken	ILMN_203524	ILMN_203524	4732493D10RIK	ri|4732493D10|PX00052B20|AK029106|4531					AK029106	4732493D10Rik		ILMN_1237171	003890497	S	4293	GACGTTGCTAAGAATAATGCAGTGCCTCCCAGCAGTCAGGAGGAGGGCCG										
Mus musculus	RefSeq	ILMN_190810	ILMN_261681	LNP	NM_027133.2	NM_027133.2		69605	84872192	NM_027133.2	Lnp	NP_081409.1	ILMN_1250949	002970136	S	5561	CCACTGCTTACGTCCTTTCAGTATACATAGGTTATTGTTTTCAGTGCTGC	2	-	74355971-74356020	2qC3	Mus musculus limb and neural patterns (Lnp), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		9530051D01Rik; 4921514L11Rik; 2310011O18Rik; Ul; AI666268; ulnaless	9530051D01Rik; 4921514L11Rik; 2310011O18Rik; Ul; AI666268; ulnaless
Mus musculus	RefSeq	ILMN_191743	ILMN_261681	LNP	NM_027133.2	NM_027133.2		69605	84872192	NM_027133.2	Lnp	NP_081409.1	ILMN_2712258	004850592	S	1767	GGCTAGGAATAATTTCTTCCATAGTATTTAAGGGTTGAAACATAATTAAG	2	-	74359765-74359814	2qC3	Mus musculus limb and neural patterns (Lnp), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		9530051D01Rik; 4921514L11Rik; 2310011O18Rik; Ul; AI666268; ulnaless	9530051D01Rik; 4921514L11Rik; 2310011O18Rik; Ul; AI666268; ulnaless
Mus musculus	RefSeq	ILMN_208822	ILMN_208822	CD28	NM_007642.2	NM_007642.2		12487	31542358	NM_007642.2	Cd28	NP_031668.2	ILMN_2589871	007320161	S	268	CGACGGGGATTTCGACAACGAAACAGTGACGTTCCGTCTCTGGAATCTGC	1	+	60707729-60707778	1qC2	Mus musculus CD28 antigen (Cd28), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IMP]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IMP]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of an inflammatory response to an antigenic stimulus [goid 2863] [evidence IMP]			
Mus musculus	MEEBO	ILMN_223819	ILMN_223819	BOK	scl17622.1.190_1				7949081	NM_016778	Bok		ILMN_2772077	000450372	S	1340	GCTCTAGGCTAGTTCACCTGACCAATGAACAAGAGATCCTGTGGATGAGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]			
Mus musculus	MEEBO	ILMN_193698	ILMN_193698	2310058D17RIK	scl40176.2_565						2310058D17Rik		ILMN_2499598	004060403	S	9	CGATGATGTTGCCTTTTCTCTCTTGATCAGGCTCCTCCCTCAATTGTTTC										
Mus musculus	MEEBO	ILMN_184887	ILMN_184887	SLC12A6	scl0003269.1_0				19526768	NM_133648	Slc12a6		ILMN_2422414	004780358	S	2	TGCCGCACTTCACTGTGACCAAGGTAGAAGACCCAGAGGAGGGGGCAGCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221048	ILMN_221048	CHST11	NM_021439.2	NM_021439.2		58250	76559941	NM_021439.2	Chst11	NP_067414.2	ILMN_1215528	002260326	S	1636	CGGGGTGGAATATCCCTGTTTTTAGAAGTGGATACTGCAACACTGTCTCC	10	+	82654753-82654802	10qC1	Mus musculus carbohydrate sulfotransferase 11 (Chst11), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate [goid 30206] [evidence IDA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process by which the anatomical structures of the tail are generated and organized. Morphogenesis pertains to the creation of form. The tail is the hindmost part of some animals [goid 35121] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The chemical reactions and pathways involving chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate. They usually occur linked to a protein to form proteoglycans. Two subgroups exist, one in which the sulfate is on the 4-position (chondroitin sulfate A) and the second in which it is in the 6-position (chondroitin sulfate C). They often are polydisperse and often differ in the degree of sulfation from tissue to tissue. The chains of repeating disaccharide are covalently linked to the side chains of serine residues in the polypeptide backbone of a protein by a glycosidic attachment through the trisaccharide unit galactosyl-galactosyl-xylosyl. Chondroitin sulfate B is more usually known as dermatan sulfate [goid 30204] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IMP]; Any process by which a polysaccharide is transported to, or maintained in, a specific location [goid 33037] [evidence IMP]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]	Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IDA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 4'-sulfate [goid 47756] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	C4ST1; C4s; C4ST-1; C4ST; 1110020P09Rik	C4ST1; C4s; C4ST-1; C4ST; 1110020P09Rik
Mus musculus	RefSeq	ILMN_188477	ILMN_221048	CHST11	NM_021439.2	NM_021439.2		58250	76559941	NM_021439.2	Chst11	NP_067414.2	ILMN_1223070	003390678	S	5152	CCCCCAGCAGAGCTAAACAGCCCCTCTGAATAGACAACAGGACCTTCTAG	10	+	82658269-82658318	10qC1	Mus musculus carbohydrate sulfotransferase 11 (Chst11), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate [goid 30206] [evidence IDA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process by which the anatomical structures of the tail are generated and organized. Morphogenesis pertains to the creation of form. The tail is the hindmost part of some animals [goid 35121] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The chemical reactions and pathways involving chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate. They usually occur linked to a protein to form proteoglycans. Two subgroups exist, one in which the sulfate is on the 4-position (chondroitin sulfate A) and the second in which it is in the 6-position (chondroitin sulfate C). They often are polydisperse and often differ in the degree of sulfation from tissue to tissue. The chains of repeating disaccharide are covalently linked to the side chains of serine residues in the polypeptide backbone of a protein by a glycosidic attachment through the trisaccharide unit galactosyl-galactosyl-xylosyl. Chondroitin sulfate B is more usually known as dermatan sulfate [goid 30204] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IMP]; Any process by which a polysaccharide is transported to, or maintained in, a specific location [goid 33037] [evidence IMP]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]	Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IDA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 4'-sulfate [goid 47756] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	C4ST1; C4s; C4ST-1; C4ST; 1110020P09Rik	C4ST1; C4s; C4ST-1; C4ST; 1110020P09Rik
Mus musculus	RefSeq	ILMN_199866	ILMN_199866	LOC384017	XM_357371.1	XM_357371.1			38078354	XM_357371.1	LOC384017		ILMN_2536765	003120291	S	2	TGACTGAAAAGCTGCGGTCTGTGGTCACTGCAGAAGACGACATGGGGCAG										
Mus musculus	RefSeq	ILMN_200633	ILMN_326174	LOC100042952	XM_001479143.1	XM_001479143.1		100042952	149255217	XM_001479143.1	LOC100042952	XP_001479193.1	ILMN_2539454	004540762	S	275	CAGGCTTTGTGGGCTCCCATCTAACTGACAAACTCATGATGGATGGCCAT	6	+	76234594-76234643	6qC2	PREDICTED: Mus musculus similar to UDP-glucuronate decarboxylase 1 (LOC100042952), mRNA.					
Mus musculus	RefSeq	ILMN_212702	ILMN_212702	FGF16	NM_030614.2	NM_030614.2		80903	126116562	NM_030614.2	Fgf16	NP_085117.2	ILMN_2629362	005310181	S	529	GGACTCGGAGAGACAGTATTATGTGGCCCTGAATAAAGACGGCTCACCCC	X	+	102969360-102969409	XqD	Mus musculus fibroblast growth factor 16 (Fgf16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214312	ILMN_214312	4921509C19RIK	NM_198655.2	NM_198655.2		381393	118130885	NM_198655.2	4921509C19Rik	NP_941057.1	ILMN_2646744	002360092	S	2501	CTCATAAGCAAGATAGAGTGGGCATGAACAGCTAAGCCCATTGCTCATGG	2	-	151296409-151296458	2qG3	Mus musculus RIKEN cDNA 4921509C19 gene (4921509C19Rik), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Gm1005; RP23-419G21.2	Gm1005; RP23-419G21.2
Mus musculus	RefSeq	ILMN_214312	ILMN_214312	4921509C19RIK	NM_198655.2	NM_198655.2		381393	118130885	NM_198655.2	4921509C19Rik	NP_941057.1	ILMN_1234561	006960687	S	357	AGCAATAAAAATCCTCCCCAAAAGCAGGAAAAACTCCCTTGTCCAACCCG	2	-	151299293-151299342	2qG3	Mus musculus RIKEN cDNA 4921509C19 gene (4921509C19Rik), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Gm1005; RP23-419G21.2	Gm1005; RP23-419G21.2
Mus musculus	RefSeq	ILMN_186615	ILMN_186615	VEZF1	NM_016686.3	NM_016686.3		22344	117414175	NM_016686.3	Vezf1	NP_057895.2	ILMN_1229971	000380523	S	4305	TCTGACATCCAGCCTGTTATGCTTGCTCTAGGGCTCGCTGCTTGGCCTGC	11	+	87898015-87898064	11qC	Mus musculus vascular endothelial zinc finger 1 (Vezf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The progression of an endothelial cell over time, from its formation to the mature structure [goid 1885] [evidence IMP]		AI848691; AW046909; db1	AI848691; AW046909; db1
Mus musculus	RefSeq	ILMN_185064	ILMN_185064	TRIM36	NM_178872.3	NM_178872.3		28105	40254334	NM_178872.3	Trim36	NP_849203.2	ILMN_2446281	001450678	S	3605	GTCTAGTCAGTTTTTATATCTTTTCTACATTGAATGTTAATTTCTGCAAA	18	-	46325763-46325812	18qC	Mus musculus tripartite motif-containing 36 (Trim36), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D18Wsu100e; haprin	D18Wsu100e; haprin
Mus musculus	RefSeq	ILMN_185064	ILMN_185064	TRIM36	NM_178872.3	NM_178872.3		28105	40254334	NM_178872.3	Trim36	NP_849203.2	ILMN_2857947	003130241	S	3495	CCAGTTGGATGGCATTATTTGTGGGCTCATTGTGTGGTCATAAGCACTTG	18	-	46325873-46325922	18qC	Mus musculus tripartite motif-containing 36 (Trim36), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D18Wsu100e; haprin	D18Wsu100e; haprin
Mus musculus	RefSeq	ILMN_185064	ILMN_185064	TRIM36	NM_178872.3	NM_178872.3		28105	40254334	NM_178872.3	Trim36	NP_849203.2	ILMN_1220109	000130491	S	2355	GGACACCCCACGTGACTGATGAGGATAAGAACCGTGAACAAAGCCATGCC	18	-	46327013-46327062	18qC	Mus musculus tripartite motif-containing 36 (Trim36), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D18Wsu100e; haprin	D18Wsu100e; haprin
Mus musculus	RefSeq	ILMN_185064	ILMN_185064	TRIM36	NM_178872.3	NM_178872.3		28105	40254334	NM_178872.3	Trim36	NP_849203.2	ILMN_1236233	005900451	S	1866	GGAGTCACGAAAGGTAAACACTTCTGGGCCTGCCGCGTGGAACCGTATTC	18	-	46328879-46328928	18qC	Mus musculus tripartite motif-containing 36 (Trim36), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D18Wsu100e; haprin	D18Wsu100e; haprin
Mus musculus	RefSeq	ILMN_211117	ILMN_211117	PPM1D	NM_016910.2	NM_016910.2		53892	31560441	NM_016910.2	Ppm1d	NP_058606.2	ILMN_3133522	002320537	A	2684	TGTGTTTGCCTCACACACCATTTGTCCCAGACCAGTGGCATTAGGCCATA	11	+	85160363-85160412	11qC	Mus musculus protein phosphatase 1D magnesium-dependent, delta isoform (Ppm1d), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the removal of a serine- or threonine-bound phosphate group from a protein; action dependent on magnesium [goid 4724] [evidence ISS]	Wip1; AV338790	Wip1; AV338790
Mus musculus	RefSeq	ILMN_213406	ILMN_213406	ASNS	NM_012055.1	NM_012055.1		27053	33469122	NM_012055.1	Asns	NP_036185.1	ILMN_3006123	002320626	S	1571	TCAGGTTGATGATGAAATGATGTCTGCAGCCTCCCAGAAGTTTCCCTTCA	6	-	7625477-7625524:7625993-7625994	6qA1	Mus musculus asparagine synthetase (Asns), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid [goid 6529] [evidence ISO]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate [goid 4066] [evidence ISO]		
Mus musculus	RefSeq	ILMN_200337	ILMN_200337	LOC386260	XM_359144.1	XM_359144.1			38081344	XM_359144.1	LOC386260		ILMN_1219517	001440609	S	451	GGTGGACCTTCTGTCTGGAGATTTGGAGAGGATCGAGCAGATCAGGTGTT										
Mus musculus	RefSeq	ILMN_254889	ILMN_254889	TRIM38	NM_001029935.1	NM_001029935.1		214158	71480133	NM_001029935.1	Trim38	NP_001025106.1	ILMN_2986364	006960307	S	768	GTGTGAGGCCATGAAGCGAAACCCACTGAAGGCTGATCCCCTGAAGGTTC	13	+	23881327-23881376	13qA3.1	Mus musculus tripartite motif-containing 38 (Trim38), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm23	Gm23
Mus musculus	RefSeq	ILMN_197162	ILMN_254889	TRIM38	NM_001029935.1	NM_001029935.1		214158	71480133	NM_001029935.1	Trim38	NP_001025106.1	ILMN_1228339	002940451	S	998	GGTTTTATGGTTTACCCTGTGTCCTGGGCTGTGAGGGCTTTACTTCGGGG	13	+	23882946-23882995	13qA3.1	Mus musculus tripartite motif-containing 38 (Trim38), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm23	Gm23
Mus musculus	MEEBO	ILMN_223956	ILMN_223956	CAPNS1	scl31535.10.6_2				6753255	NM_009795	Capns1		ILMN_2772248	007210561	S	583	TACTGACCGATCAGGGACTATCGGTAGCCATGAACTTCCAGGGGCCTTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217046	ILMN_217046	2610028A01RIK	NM_028228.2	NM_028228.2		72400	141803006	NM_028228.2	2610028A01Rik	NP_082504.1	ILMN_2678513	005820598	S	472	CCTCTCGGAGTGAAACCGACCTGGACTGCATTTTTGGAAAAAGGAGGAAC	14	+	64496961-64497010	14qD1	Mus musculus RIKEN cDNA 2610028A01 gene (2610028A01Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pinx1; AU024023; LPTS; MGC144540; LPTS1; 2210403I16Rik; 67-11-3	Pinx1; AU024023; LPTS; MGC144540; LPTS1; 2210403I16Rik; 67-11-3
Mus musculus	RefSeq	ILMN_197084	ILMN_197084	LOC227393	XM_129965.3	XM_129965.3			38073926	XM_129965.3	LOC227393		ILMN_2526851	002850286	S	303	CAAGTTGCCCCAGCAGATCCTTCAAGGTCTTGTTGATGTTCGCATCCCTC										
Mus musculus	RefSeq	ILMN_213966	ILMN_213966	SLC44A3	NM_145394.2	NM_145394.2		213603	142351480	NM_145394.2	Slc44a3	NP_663369.1	ILMN_2642815	006590110	S	2134	TGTGACACCGAGACAAAGTCTACAGCTGTTTTCACGTGAACTAGAGCACG	3	-	121162816-121162865	3qG1	Mus musculus solute carrier family 44, member 3 (Slc44a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BC010552; MGC38127; MGC18084	BC010552; MGC38127; MGC18084
Mus musculus	MEEBO	ILMN_223850	ILMN_223850	DKK2	scl22603.4.1012_0				31560346	NM_020265	Dkk2		ILMN_2770400	005690647	S	2902	ATAACATATCTCTAATCTATAGAAATTCCCTGAAATCGTTTCACTATTTT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]			
Mus musculus	RefSeq	ILMN_214582	ILMN_214582	CXX1C	NM_028375.3	NM_028375.3		72865	115270961	NM_028375.3	Cxx1c	NP_082651.1	ILMN_2943972	004730168	S	111	GAGACCTCGCCGCCATGGACCGCCGGATTAAGTTGATTATGGCCCTCATG	X	+	50911209-50911222:50911223-50911258	XqA5	Mus musculus CAAX box 1 homolog C (human) (Cxx1c), mRNA.				Mar8.1; 2900027G03Rik; Mart8a	Mar8.1; 2900027G03Rik; Mart8a
Mus musculus	MEEBO	ILMN_187351	ILMN_187351	LOC338535	scl21281.3_435						LOC338535		ILMN_1251569	001770215	S	9	CTGGATCTAGACTTGGGAATCTTCAATCCAGTGTCCCCACCTATAGGAGC										
Mus musculus	RefSeq	ILMN_209237	ILMN_209237	OLFR424	NM_146721.1	NM_146721.1		258716	22129394	NM_146721.1	Olfr424	NP_666932.1	ILMN_2593892	002600259	S	741	CTTGATGTTCTATGGCAGTGTCTCCCTCATGTATCTGCGTTTCTCAGCTA	1	+	176067617-176067666	1qH3	Mus musculus olfactory receptor 424 (Olfr424), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC123723; MOR105-2; MGC123722	MGC123723; MOR105-2; MGC123722
Mus musculus	RefSeq	ILMN_199636	ILMN_199636	LOC382815	XM_356691.1	XM_356691.1			38075408	XM_356691.1	LOC382815		ILMN_2535937	003460598	S	231	GTGGGTGCTGTACACAGAGTGTTCAGTGGAAGGCTGTGGAGAGGTGCTGT										
Mus musculus	MEEBO	ILMN_219816	ILMN_219816	KLRC1	scl016641.3_26				6754465	NM_010652	Klrc1		ILMN_2713909	004540592	S	319	CTTGTCCTCATTGTCCAAAGGAGTGGATATCATATTCTCACAATTGTTAT						The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199040	ILMN_199040	LOC380642	XM_354547.1	XM_354547.1			38090560	XM_354547.1	LOC380642		ILMN_2533831	007000041	S	138	ATGTTCGCCCCTGAGGAGCCACAGCCACCGGTGGTCTACACCATGGAGAA										
Mus musculus	RefSeq	ILMN_217441	ILMN_217441	MBTPS1	NM_019709.3	NM_019709.3		56453	42476184	NM_019709.3	Mbtps1	NP_062683.2	ILMN_1231860	002690608	S	160	CCTGTGGAAGCGTTATCCAGGACAGTGCTAAAGTGACTCAGTGCAGGCAG	8	-	122073479-122073528	8qE1	Mus musculus membrane-bound transcription factor peptidase, site 1 (Mbtps1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IDA]	The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus [goid 42990] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]	AV003995; Ski1; SKI-1; S1P; 0610038M03Rik; mKIAA0091	AV003995; Ski1; SKI-1; S1P; 0610038M03Rik; mKIAA0091
Mus musculus	RefSeq	ILMN_217441	ILMN_217441	MBTPS1	NM_019709.3	NM_019709.3		56453	42476184	NM_019709.3	Mbtps1	NP_062683.2	ILMN_1245330	005220132	S	3691	CTGCAAGGACCCCATCAGTGTGAGCATCGCAGTAGCCAGCCACAGAAGCT	8	-	122032651-122032678:122032679-122032700	8qE1	Mus musculus membrane-bound transcription factor peptidase, site 1 (Mbtps1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IDA]	The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus [goid 42990] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]	AV003995; Ski1; SKI-1; S1P; 0610038M03Rik; mKIAA0091	AV003995; Ski1; SKI-1; S1P; 0610038M03Rik; mKIAA0091
Mus musculus	RefSeq	ILMN_217441	ILMN_217441	MBTPS1	NM_019709.3	NM_019709.3		56453	42476184	NM_019709.3	Mbtps1	NP_062683.2	ILMN_2748537	005890750	S	3693	CAAGGACCCCATCAGTGTGAGCATCGCAGTAGCCAGCCACAGAAGCTAAC	8	-	122032649-122032678:122032679-122032698	8qE1	Mus musculus membrane-bound transcription factor peptidase, site 1 (Mbtps1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IDA]	The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus [goid 42990] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]	AV003995; Ski1; SKI-1; S1P; 0610038M03Rik; mKIAA0091	AV003995; Ski1; SKI-1; S1P; 0610038M03Rik; mKIAA0091
Mus musculus	RefSeq	ILMN_217441	ILMN_217441	MBTPS1	NM_019709.3	NM_019709.3		56453	42476184	NM_019709.3	Mbtps1	NP_062683.2	ILMN_1239494	006250632	S	3435	GTGTTACCCAACTTTCGATCCAATCGCCCTCAAGTGAGACCTTTGTCCCC	8	-	122034185-122034234	8qE1	Mus musculus membrane-bound transcription factor peptidase, site 1 (Mbtps1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IDA]	The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus [goid 42990] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]	AV003995; Ski1; SKI-1; S1P; 0610038M03Rik; mKIAA0091	AV003995; Ski1; SKI-1; S1P; 0610038M03Rik; mKIAA0091
Mus musculus	RefSeq	ILMN_212655	ILMN_212655	PTPRS	NM_011218.1	NM_011218.1		19280	25092608	NM_011218.1	Ptprs	NP_035348.1	ILMN_2737758	006220692	S	6674	GCAGCAGGTGACGCCCCTGTATGTAGATAAACCAACTTTGTATTAAAGAA	17	-	56551873-56551922	17qD	Mus musculus protein tyrosine phosphatase, receptor type, S (Ptprs), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	RPTPsigma; PTPsigma; MGC90571; PTP-NU3; PTP; Ptpt9; AL022616	RPTPsigma; PTPsigma; MGC90571; PTP-NU3; PTP; Ptpt9; AL022616
Mus musculus	RefSeq	ILMN_212655	ILMN_212655	PTPRS	NM_011218.1	NM_011218.1		19280	25092608	NM_011218.1	Ptprs	NP_035348.1	ILMN_2747125	000670097	S	2080	ACCCGGACCCCAAGGAGGTGAACAACATACCCCCGACCACCACTCAGATC	17	-	56568386-56568435	17qD	Mus musculus protein tyrosine phosphatase, receptor type, S (Ptprs), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	RPTPsigma; PTPsigma; MGC90571; PTP-NU3; PTP; Ptpt9; AL022616	RPTPsigma; PTPsigma; MGC90571; PTP-NU3; PTP; Ptpt9; AL022616
Mus musculus	RefSeq	ILMN_212655	ILMN_212655	PTPRS	NM_011218.1	NM_011218.1		19280	25092608	NM_011218.1	Ptprs	NP_035348.1	ILMN_3009685	004390639	S	6655	CGCTGTTTTTTGGGCAGAAGCAGCAGGTGACGCCCCTGTATGTAGATAAA	17	-	56551892-56551941	17qD	Mus musculus protein tyrosine phosphatase, receptor type, S (Ptprs), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	RPTPsigma; PTPsigma; MGC90571; PTP-NU3; PTP; Ptpt9; AL022616	RPTPsigma; PTPsigma; MGC90571; PTP-NU3; PTP; Ptpt9; AL022616
Mus musculus	RefSeq	ILMN_212655	ILMN_212655	PTPRS	NM_011218.1	NM_011218.1		19280	25092608	NM_011218.1	Ptprs	NP_035348.1	ILMN_1228975	004230152	S	2449	CGAACCTCCAGCCTGAGACTGCTTACTCTATCACAGTAGCCGCGTATACC	17	-	56565864-56565913	17qD	Mus musculus protein tyrosine phosphatase, receptor type, S (Ptprs), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	RPTPsigma; PTPsigma; MGC90571; PTP-NU3; PTP; Ptpt9; AL022616	RPTPsigma; PTPsigma; MGC90571; PTP-NU3; PTP; Ptpt9; AL022616
Mus musculus	RefSeq	ILMN_212655	ILMN_212655	PTPRS	NM_011218.1	NM_011218.1		19280	25092608	NM_011218.1	Ptprs	NP_035348.1	ILMN_2688930	004760300	S	2259	CGGAAGGTGGAGGCGGAGGCGCTCAACGCCACAGCCATCCGAGTGCTGTG	17	-	56567488-56567537	17qD	Mus musculus protein tyrosine phosphatase, receptor type, S (Ptprs), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	RPTPsigma; PTPsigma; MGC90571; PTP-NU3; PTP; Ptpt9; AL022616	RPTPsigma; PTPsigma; MGC90571; PTP-NU3; PTP; Ptpt9; AL022616
Mus musculus	RefSeq	ILMN_218736	ILMN_218736	UFM1	NM_026435.3	NM_026435.3		67890	141802809	NM_026435.3	Ufm1	NP_080711.1	ILMN_1229495	006620014	S	2919	TGGAAGCATCAATATACTGTAAAGGAGCAATCCTAGGTCCTTACTGTACC	3	-	53659161-53659210	3qC	Mus musculus ubiquitin-fold modifier 1 (Ufm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		AI463323; AI132708; 1810045K17Rik	AI463323; AI132708; 1810045K17Rik
Mus musculus	RefSeq	ILMN_188850	ILMN_233032	ZFP563	NM_001024950.2	NM_001024950.2		240068	113930757	NM_001024950.2	Zfp563	NP_001020121.2	ILMN_2456301	006450132	S	5823	CACCTGTTTGATAATGACACATTAAATAGCTTAATTACCTGAGTGTTTCA	17	+	33247090-33247139	17qB1	Mus musculus zinc finger protein 563 (Zfp563), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D130054H01; D10628; NTfin7; Zfp413	D130054H01; D10628; NTfin7; Zfp413
Mus musculus	RefSeq	ILMN_213978	ILMN_233032	ZFP563	NM_001024950.2	NM_001024950.2		240068	113930757	NM_001024950.2	Zfp563	NP_001020121.2	ILMN_2642938	006510280	S	1135	GTGGTAAAGCCTTCACTATACAGAGTTCTCTTCAGCGCCATGAAAGGATT	17	+	33242402-33242451	17qB1	Mus musculus zinc finger protein 563 (Zfp563), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D130054H01; D10628; NTfin7; Zfp413	D130054H01; D10628; NTfin7; Zfp413
Mus musculus	RefSeq	ILMN_212165	ILMN_212165	ABCD2	NM_011994.2	NM_011994.2		26874	60218874	NM_011994.2	Abcd2	NP_036124.2	ILMN_1245831	000070364	S	2146	TCAGGCTGCTATTGGGGCTGGGATTTCCCTACTCTCCATAACACACAGGC	15	-	90982095-90982144	15qE3	Mus musculus ATP-binding cassette, sub-family D (ALD), member 2 (Abcd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ALDR; ABC39; ALDL1; ALDRP	ALDR; ABC39; ALDL1; ALDRP
Mus musculus	RefSeq	ILMN_212165	ILMN_212165	ABCD2	NM_011994.2	NM_011994.2		26874	60218874	NM_011994.2	Abcd2	NP_036124.2	ILMN_1243944	001260544	S	2286	CGTTGAGTGAGGAAAAGCAAAAGTTGGAGTCGCAGCTCGCTGGAATTCCC	15	-	90979506-90979555	15qE3	Mus musculus ATP-binding cassette, sub-family D (ALD), member 2 (Abcd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ALDR; ABC39; ALDL1; ALDRP	ALDR; ABC39; ALDL1; ALDRP
Mus musculus	MEEBO	ILMN_188353	ILMN_188353	TAGLN	scl37005.1_98				31981464	NM_011526	Tagln		ILMN_1215145	003800594	S	2	TGGCCTGTGGACTATTTTGACAACCCCTGGCCTAGAGCCAACCTCCTGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]			
Mus musculus	RefSeq	ILMN_197085	ILMN_311460	LOC666025	XR_033301.1	XR_033301.1		666025	149234229	XR_033301.1	LOC666025		ILMN_1231307	002600491	S	1191	AAATGCCCCCAAGGTCTCAGAGGAAGCCGTGAAGAGAGATTCAGAGTTGT	1	-	96365527-96365576	1qD	PREDICTED: Mus musculus similar to magnesium dependent protein phosphatase beta-1 (LOC666025), misc RNA.					
Mus musculus	RefSeq	ILMN_208916	ILMN_208916	AA407659	NM_175352.2	NM_175352.2		106840	31341686	NM_175352.2	AA407659	NP_780561.1	ILMN_2876010	000830093	S	3411	CAGAGCACCATAGCCACAGGGAGTCTGGACGAGGTGGGCGCATTCTTGTT	5	-	115383747-115383796	5qF	Mus musculus expressed sequence AA407659 (AA407659), mRNA.				AI414892	AI414892
Mus musculus	RefSeq	ILMN_208916	ILMN_208916	AA407659	NM_175352.2	NM_175352.2		106840	31341686	NM_175352.2	AA407659	NP_780561.1	ILMN_2876015	000610356	S	3474	GGCCTTTACGATGCTGTCACTCAAGTTGTGAAAGTCCATTTTCCCTGTAA	5	-	115383684-115383733	5qF	Mus musculus expressed sequence AA407659 (AA407659), mRNA.				AI414892	AI414892
Mus musculus	RefSeq	ILMN_199912	ILMN_238612	GM1667	XM_979440.1	XM_979440.1		381564	94372602	XM_979440.1	Gm1667	XP_984534.1	ILMN_1258287	002970689	S	522	GAGGACAGAGCTACCCACTGCACCATGCACTCACCTGCCAAGGAATTGCC	4	+	139468012-139468061	4qD3	PREDICTED: Mus musculus gene model 1667, (NCBI) (Gm1667), mRNA.					
Mus musculus	RefSeq	ILMN_221121	ILMN_221121	COPS8	NM_133805.3	NM_133805.3		108679	114158690	NM_133805.3	Cops8	NP_598566.3	ILMN_1218868	000610762	S	1307	GACAGTCTGCAGTGAGAACTCAACTTAGGTGTTCTCGGGGAAACTCCAAG	1	+	92509380-92509429	1qD	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana) (Cops8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sgn8; 9430009J09Rik; AA408242; Csn8	Sgn8; 9430009J09Rik; AA408242; Csn8
Mus musculus	RefSeq	ILMN_215971	ILMN_215971	IL12RB2	NM_008354.3	NM_008354.3		16162	145966810	NM_008354.3	Il12rb2	NP_032380.1	ILMN_1219641	006660286	S	2698	GTGAGCGGCTGACTCTAGATCGGTTAAAGATGGGCTATGACTCCCTCATG				6qC1	Mus musculus interleukin 12 receptor, beta 2 (Il12rb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IGI]; The appearance of interferon-gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon-gamma is also known as type II interferon [goid 32609] [evidence IGI]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]	A930027I18Rik; IL-12RB2; Ifnm	A930027I18Rik; IL-12RB2; Ifnm
Mus musculus	RefSeq	ILMN_191112	ILMN_227359	HCST	NM_011827.2	NM_011827.2		23900	93102418	NM_011827.2	Hcst	NP_035957.2	ILMN_1220418	001510497	S	250	CTCCTAATTGTAGGGGTGGTGTTTGTATGTATGCGCCCACACGGCAGGCC	7	-	31203114-31203163	7qB1	Mus musculus hematopoietic cell signal transducer (Hcst), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DAP10; KAP10	DAP10; KAP10
Mus musculus	Riken	ILMN_204194	ILMN_204194	5133400O11RIK	ri|C730033L13|PX00087I06|AK050281|2240					AK050281	5133400O11Rik		ILMN_1219102	007380044	S	363	CGAAGGGGATTACCTGGTCCGAACGTAGTAAGACGCTGGAGCTAAAGGTG										
Mus musculus	RefSeq	ILMN_184961	ILMN_239470	AKTIP	NM_010241.1	NM_010241.1		14339	6753917	NM_010241.1	Aktip	NP_034371.1	ILMN_2596713	006180632	S	1938	CTTGTAGGTCCTCAGCTGGGTGCTGTAGACGAGCATGAAGTTACCTAGTA	8	-	94013781-94013830	8qC5	Mus musculus thymoma viral proto-oncogene 1 interacting protein (Aktip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of protein binding [goid 32092] [evidence ISA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	Ft1; Fif; Ft; Fts	Ft1; Fif; Ft; Fts
Mus musculus	RefSeq	ILMN_238041	ILMN_238041	TTLL11	NM_028921.1	NM_028921.1		74410	110625990	NM_028921.1	Ttll11	NP_083197.1	ILMN_2934028	002260370	S	1649	TCACCTGTGCGTCCTCTCTGTGTTCCGTAGGGCATTTTGCCTCACACGGC	2	-	35607588-35607637	2qB	Mus musculus tubulin tyrosine ligase-like family, member 11 (Ttll11), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	4933424A20Rik; 4932702F08Rik; D2Ertd624e; AU043211	4933424A20Rik; 4932702F08Rik; D2Ertd624e; AU043211
Mus musculus	Riken	ILMN_205788	ILMN_205788	D230024N23RIK	ri|D230024N23|PX00189A13|AK051964|2337					AK051964	D230024N23Rik		ILMN_1239738	003990719	S	1843	GCTTCCTTTAGCTGGGTTCAGGATGTACACAAGGGTTGGAGGCCATCAGC										
Mus musculus	MEEBO	ILMN_192779	ILMN_192779	GRIP1	scl38386.32_176				19263325	NM_028736	Grip1		ILMN_2491265	003460382	S	5	GCTCATTGCCAATCACTGTCCCCCCGAAGCAATAAACCGTGACAGTTGCT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_215834	ILMN_215834	PYCR1	scl39227.8.1_2	NM_144795.1			21450148	NM_144795.1	Pycr1		ILMN_2664155	000510176	S	998	CCATGTCAAGCCACTGCCCTGAAACCTGGTCCCAGCAGGCAAGGAATGAT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [evidence IEA]		
Mus musculus	Riken	ILMN_202922	ILMN_202922	4732474K08RIK	ri|4732474K08|PX00052B17|AK028961|2728					AK028961	4732474K08Rik		ILMN_1235400	000160546	S	2374	GGCAGTCCGGGGTGGGGGGGAGCATTAGAGATTGCAGAGAATAACCATCG										
Mus musculus	RefSeq	ILMN_228451	ILMN_228451	PLCD4	NM_001081456.1	NM_001081456.1		18802	125347157	NM_001081456.1	Plcd4	NP_001074925.1	ILMN_3062126	000430736	I	90	CGGAGCTCGGGAGGCGACCCTCGCAGACACAAGATTACTATCCTACCTAC	1	+	74589552-74589601	1qC3	Mus musculus phospholipase C, delta 4 (Plcd4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The chemical reactions and pathways involving phosphoinositides, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of inositol. They are important constituents of cell membranes [goid 30384] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]	4921507K24Rik	4921507K24Rik
Mus musculus	RefSeq	ILMN_228451	ILMN_228451	PLCD4	NM_001081456.1	NM_001081456.1		18802	125347157	NM_001081456.1	Plcd4	NP_001074925.1	ILMN_3139646	001030358	A	2245	GGTATTAATCCATACTGGGGGGAGACTTTCTATTTCCGGCTCCAGGTACC	1	+	74611086-74611086:74611606-74611654	1qC3	Mus musculus phospholipase C, delta 4 (Plcd4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The chemical reactions and pathways involving phosphoinositides, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of inositol. They are important constituents of cell membranes [goid 30384] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]	4921507K24Rik	4921507K24Rik
Mus musculus	RefSeq	ILMN_221368	ILMN_228451	PLCD4	NM_001081456.1	NM_001081456.1		18802	125347157	NM_001081456.1	Plcd4	NP_001074925.1	ILMN_2734652	007100048	S	2329	TATAGCAGGAAATCCCGAAATAACTTTATTGGCCAATACACCCTACCTTG	1	+	74611689-74611738	1qC3	Mus musculus phospholipase C, delta 4 (Plcd4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The chemical reactions and pathways involving phosphoinositides, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of inositol. They are important constituents of cell membranes [goid 30384] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]	4921507K24Rik	4921507K24Rik
Mus musculus	RefSeq	ILMN_206536	ILMN_325960	LOC100048376	XM_001480234.1	XM_001480234.1		100048376	149269472	XM_001480234.1	LOC100048376	XP_001480284.1	ILMN_1241150	002750445	S	2115	CACCCCGCTTGGTAGAATGTTAGCACGTGAGAGAGAAGGTGTGACCCGTG					PREDICTED: Mus musculus similar to CAP-GLY domain containing linker protein family, member 4, transcript variant 1 (LOC100048376), mRNA.					
Mus musculus	RefSeq	ILMN_217621	ILMN_217621	CNGA2	NM_007724.2	NM_007724.2		12789	31982858	NM_007724.2	Cnga2	NP_031750.2	ILMN_2685553	005340202	S	2702	CCTACTGCATTCTGCCCCAAATACCTTTTTAATGTGTTCTCTGAACAGCC	X	+	69255221-69255270	XqA7.3	Mus musculus cyclic nucleotide gated channel alpha 2 (Cnga2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IMP]	Cnca; Cncg4; OCNC1	Cnca; Cncg4; OCNC1
Mus musculus	MEEBO	ILMN_223943	ILMN_223943	OLFR1186	scl20664.1.1_232				33239039	NM_146530	Olfr1186		ILMN_2771929	006520100	S	763	TACACATGGCCACCAACCACTTTTCCAATAGACAAAATGGTATCTTTGTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214811	ILMN_214811	GPN2	NM_133884.1	NM_133884.1		100210	19527097	NM_133884.1	Gpn2	NP_598645.1	ILMN_1214375	000540402	S	1182	GGCTCTACATGGGCTGCAGTGGATGGGCATGCTACGATAGGAGATGAGTC	4	+	133147483-133147532	4qD2.3	Mus musculus GPN-loop GTPase 2 (Gpn2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	R74630; AI838661	R74630; AI838661
Mus musculus	RefSeq	ILMN_201100	ILMN_233378	LOC665306	XM_975983.1	XM_975983.1		665306	94383028	XM_975983.1	LOC665306	XP_981077.1	ILMN_1216995	004050497	S	624	GTGTGAGGGGTGGGTGCTTTGGAACAAGTTGCAGACTATCGAGGAGTCGG	8	-	10926349-10926389:10926861-10926869	8qA1.1	PREDICTED: Mus musculus hypothetical LOC665306 (LOC665306), mRNA.					
Mus musculus	Riken	ILMN_203502	ILMN_203502	RAX	ri|E130303K03|PX00092D18|AK053732|2861					AK053732	Rax		ILMN_1220211	001990148	S	2720	CTCCAGTGCAAGAAGCCATCATGTCCTTGGGAGGAGGAATGTTTCCATGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of the hypothalamus region of the forebrain, from its initial formation to its mature state [goid 21854] [evidence IMP]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	Riken	ILMN_207103	ILMN_207103	E530018J06RIK	ri|E530018J06|PX00319E24|AK089157|1703					AK089157	E530018J06Rik		ILMN_1251587	001070086	S	1523	TGGGGGCAAAAGTTGTCAAATTGCTTGGGCCCGAGTGTCAACTCTGCCTC										
Mus musculus	MEEBO	ILMN_221652	ILMN_221652	A530020G20RIK	scl22673.4.1062_0	NM_177014.2			31342595	NM_177014.2	A530020G20Rik		ILMN_2738459	006270307	S	2494	TCTACATTCAAAGTGGGTGCTCCCTCAGAGTTAATCCTTTCTGCAGGCAG										
Mus musculus	RefSeq	ILMN_209089	ILMN_209089	REG1	NM_009042.1	NM_009042.1		19692	6677702	NM_009042.1	Reg1	NP_033068.1	ILMN_2592415	006040307	S	439	GGGCAACTGGGTCTCCTAACAGTTCCAATCGTGGCTACTGTGTATCTCTG	6	+	78378157-78378206	6qC3	Mus musculus regenerating islet-derived 1 (Reg1), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]		
Mus musculus	RefSeq	ILMN_184316	ILMN_184316	XRCC5	NM_009533.1	NM_009533.1		22596	27753976	NM_009533.1	Xrcc5	NP_033559.1	ILMN_1258913	002030037	S	2364	CTCTACAGAGTGACCATAAGGACATATATTACAAGAAATAACTTAGACCC	1	+	72441434-72441483	1qC3	Mus musculus X-ray repair complementing defective repair in Chinese hamster cells 5 (Xrcc5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50769] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a hemopoietic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells [goid 60218] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]	Ku80; Ku86; AI314015	Ku80; Ku86; AI314015
Mus musculus	RefSeq	ILMN_218653	ILMN_233037	ADAM26B	NM_001009547.2	NM_001009547.2		382007	148539877	NM_001009547.2	Adam26b	NP_001009547.1	ILMN_2698579	005340735	S	1745	CCCTTGCAGTGGTGAGGGCTATTGCTATAAAATGGAATGTCATCAACGTG				8qA4	Mus musculus a disintegrin and metallopeptidase domain 26B (Adam26b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191701	ILMN_191701	0610009L18RIK	scl40636.2.1_9						0610009L18Rik		ILMN_1233543	006450296	S	1	GCTGACGTTACAGTGTAATGAGTGAACTCCTCTGATGTCTTTGAAACTTT										
Mus musculus	RefSeq	ILMN_188803	ILMN_310162	2810429I04RIK	XM_001472430.1	XM_001472430.1		76937	149263808	XM_001472430.1	2810429I04Rik	XP_001472480.1	ILMN_2685497	003060220	S	239	GCCGACTAATGAACTAGTTCTTAAGTGAAAGGCATTTAACACGACTGTGC	13	+	3479183-3479191:3479192-3479232	13qA1	PREDICTED: Mus musculus RIKEN cDNA 2810429I04 gene (2810429I04Rik), mRNA.					
Mus musculus	MEEBO	ILMN_189661	ILMN_189661	IGHV1S121_AF025445_IG_HEAVY_VARIABLE_1S121_173	IGHV1S121_AF025445_Ig_heavy_variable_1S121_173						IGHV1S121_AF025445_Ig_heavy_variable_1S121_173		ILMN_2463264	002600743	S	4	ACCTGGACAGGGCCTGGAATGGATTGGAGCTATTTATCCAGGAAATGGTG										
Mus musculus	RefSeq	ILMN_215542	ILMN_215542	MTPN	NM_008098.2	NM_008098.2		14489	31543272	NM_008098.2	Mtpn	NP_032124.1	ILMN_2942989	004920685	S	3187	GTGCACAAGCTCACCTTTCCAGAACCAGCTGGGCGCAGAAGAAAGGCAGT	6	-	35439680-35439729	6qB1	Mus musculus myotrophin (Mtpn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			Gcdp; V1; 5033418D15Rik	Gcdp; V1; 5033418D15Rik
Mus musculus	RefSeq	ILMN_197564	ILMN_197564	LOC381455	XM_358585.1	XM_358585.1			38076581	XM_358585.1	LOC381455		ILMN_2528571	004250209	S	307	AAGCGGCCTCCGGGGCTTGTTGCTTTGTGCTGCAACCATGTGACTGCAAG										
Mus musculus	RefSeq	ILMN_223051	ILMN_223051	SERPINE1	NM_008871.1	NM_008871.1		18787	6679372	NM_008871.1	Serpine1	NP_032897.1	ILMN_2758651	004850563	S	2922	GTTGTTTGTCTTCACTTTTGATATATAAACAGGTAAATATGTTTTTTAAA	5	-	137537413-137537462	5qG2	Mus musculus serine (or cysteine) peptidase inhibitor, clade E, member 1 (Serpine1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IDA]	PAI-1; PAI1; Planh1	PAI-1; PAI1; Planh1
Mus musculus	Riken	ILMN_207414	ILMN_207414	F630101L04RIK	ri|F630101L04|PL00015A12|AK089240|2391					AK089240	F630101L04Rik		ILMN_1216127	001820600	S	1828	CCAAGTGCTAGGATTAAAGGTGTACCCTGCCACCACCCAGCTAAGAAAGG										
Mus musculus	RefSeq	ILMN_196767	ILMN_196767	KLK1B16	NM_008454.2	NM_008454.2		16615	118130791	NM_008454.2	Klk1b16	NP_032480.1	ILMN_1259613	005390376	S	1126	GTCACAGATGTCATGCTGTGTACAATAGAGATGGGTGAAGACAAAGGCCC	7	+	51396346-51396395	7qB4	Mus musculus kallikrein 1-related peptidase b16 (Klk1b16), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	mGk-16; Klk16	mGk-16; Klk16
Mus musculus	RefSeq	ILMN_253539	ILMN_253539	SCLT1	NM_001081411.1	NM_001081411.1		67161	124487196	NM_001081411.1	Sclt1	NP_001074880.1	ILMN_2985484	005820397	S	407	TTGCTTGTTTGAGAAATACCTTCTTTCCCCCCTGCGAGGAATCGATAAAC	3	-	41545980-41546029	3qB	Mus musculus sodium channel and clathrin linker 1 (Sclt1), mRNA.				4931421F20Rik; FLJ30655; 2610207F23Rik	4931421F20Rik; FLJ30655; 2610207F23Rik
Mus musculus	RefSeq	ILMN_209915	ILMN_253539	SCLT1	NM_001081411.1	NM_001081411.1		67161	124487196	NM_001081411.1	Sclt1	NP_001074880.1	ILMN_2600406	006290523	S	2718	CTTGTAAGTAGAAAACTATAATCCTATATTTGAGATTCAGTAGAGAATAA	3	-	41430879-41430928	3qB	Mus musculus sodium channel and clathrin linker 1 (Sclt1), mRNA.				4931421F20Rik; FLJ30655; 2610207F23Rik	4931421F20Rik; FLJ30655; 2610207F23Rik
Mus musculus	MEEBO	ILMN_188027	ILMN_188027	APG4D	scl37228.10_481				29135260	NM_153583	Apg4d		ILMN_2449193	001170128	S	17	CCAGCGGAAGCCATTTATGTCAGTCAACTCCTTGTGCCTTTAGTGCAGCT										
Mus musculus	MEEBO	ILMN_187489	ILMN_187489	1700025F24RIK	scl38389.4.1_252						1700025F24Rik		ILMN_2444585	005420066	S	2	CGAGGAAGAGACGGAACTGGCACTGTAATGGTTTGACTCATGGAGTTTTA										
Mus musculus	Riken	ILMN_206712	ILMN_206712	E530011J04RIK	ri|E530011J04|PX00319K21|AK089133|1390					AK089133	E530011J04Rik		ILMN_1246863	005570681	S	1018	GCCGTGCATACAAACTCTGCCGCGGAACTGGGCCTGAAAACAATCTGGCT										
Mus musculus	RefSeq	ILMN_213262	ILMN_213262	AGPAT6	NM_018743.2	NM_018743.2		102247	30520300	NM_018743.2	Agpat6	NP_061213.2	ILMN_2918402	002600703	S	3426	AAGGCAGGCCTGCAGGGCACTCCGCAGATGCAGTCAGCCTTCTGTCCTTC	8	-	24638852-24638901	8qA2	Mus musculus 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta) (Agpat6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways involving diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues. DAG is a normal intermediate in the biosynthesis of phosphatidyl phospholipids and is released from them by phospholipase C activity. DAG from phosphatidyl inositol polyphosphates is important in signal transduction [goid 46339] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IMP]; The chemical reactions and pathways resulting in the formation of triacylglycerol, any triester of glycerol [goid 19432] [evidence IMP]; The chemical reactions and pathways involving diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues. DAG is a normal intermediate in the biosynthesis of phosphatidyl phospholipids and is released from them by phospholipase C activity. DAG from phosphatidyl inositol polyphosphates is important in signal transduction [goid 46339] [evidence IMP]; The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland [goid 2071] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IEA]; Catalysis of the reaction: (R)-3-hydroxytetradecanoyl-[acyl-carrier protein] + UDP-N-acetylglucosamine = [acyl-carrier protein] + UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine [goid 8780] [evidence NAS]	AW545732; AU041707; Tsarg7	AW545732; AU041707; Tsarg7
Mus musculus	RefSeq	ILMN_254459	ILMN_254459	CAT	NM_009804.1	NM_009804.1		12359	6753271	NM_009804.1	Cat	NP_033934.1	ILMN_2826110	004760356	S	1756	CCCGCCGGAGCGCAGACTCACGCTGATGACTTTAAAACGATAATCCGGGC	2	-	103294773-103294822	2qE2	Mus musculus catalase (Cat), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The chemical reactions and pathways involving hemoglobin, including its uptake and utilization [goid 20027] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IDA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14068] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction in which the peroxide group acts as a hydrogen or electron acceptor [goid 16684] [evidence IDA]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IDA]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IMP]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IDA]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IMP]; Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid [goid 4046] [evidence IMP]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [evidence IDA]	2210418N07; Cas1; Cas-1; Cs-1	2210418N07; Cas1; Cas-1; Cs-1
Mus musculus	RefSeq	ILMN_184380	ILMN_239226	NUDT12	NM_026497.2	NM_026497.2		67993	142375040	NM_026497.2	Nudt12	NP_080773.1	ILMN_2635813	003420692	S	1933	CTGACTTTCTGTTCCAGTGGTCGTACTGTTGCAGTGTCACTCCTAGTGTC	17	-	59141121-59141170	17qD	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 12 (Nudt12), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NAD+ + H2O = AMP + NMN [goid 210] [evidence IEA]	0610016O18Rik	0610016O18Rik
Mus musculus	RefSeq	ILMN_227534	ILMN_227534	ERICH1	NM_001034862.1	NM_001034862.1		234086	85702198	NM_001034862.1	Erich1	NP_001030034.1	ILMN_2849753	006520167	S	941	CCCAGAGCACTGTACGATGCCTCCAGACCATGCCAAGATAATCACAGCCT	8	-	14028104-14028130:14030570-14030592	8qA1.1	Mus musculus glutamate-rich 1 (Erich1), mRNA.					
Mus musculus	RefSeq	ILMN_235890	ILMN_235890	ANK2	NM_178655.3	NM_178655.3		109676	77681961	NM_178655.3	Ank2	NP_848770.2	ILMN_3158444	004390241	A	3238	CCCAGCGTTTTGTCCAGTACCTCACAGTTTCAGGCCGAGCCAGTAGAAGG	3	-	126631700-126631749	3qG2	Mus musculus ankyrin 2, brain (Ank2), transcript variant 2, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		AW491075; Ankyrin-B; Ank-2; ankyrin>B<; AI835472; ankyrin B; Ankyrin-2	AW491075; Ankyrin-B; Ank-2; ankyrin>B<; AI835472; ankyrin B; Ankyrin-2
Mus musculus	RefSeq	ILMN_235890	ILMN_235890	ANK2	NM_178655.3	NM_178655.3		109676	77681961	NM_178655.3	Ank2	NP_848770.2	ILMN_3079138	007380338	I	1906	CGTGACACAACCCAGGAACCTTGCGGGCGACTCTCATTTATGAAGGAACC	3	-	126656164-126656213	3qG2	Mus musculus ankyrin 2, brain (Ank2), transcript variant 2, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		AW491075; Ankyrin-B; Ank-2; ankyrin>B<; AI835472; ankyrin B; Ankyrin-2	AW491075; Ankyrin-B; Ank-2; ankyrin>B<; AI835472; ankyrin B; Ankyrin-2
Mus musculus	MEEBO	ILMN_193109	ILMN_193109	DOCK4	scl0328084.5_6				51829004	XM_358307	Dock4		ILMN_1235799	007550068	S	3810	GAGACAGCTTGGGTCTCATAGGAGAGCTTTGTCTTTGTGGAGTGTGAAAT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193109	ILMN_193109	DOCK4	scl0328084.5_6				51829004	XM_358307	Dock4		ILMN_2494196	004480022	S	6	CAGATCAAGACAGGGGGCCTCTAACTGCTGGTGTTCGGTCAGAGCTTAAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]		
Mus musculus	RefSeq	ILMN_226167	ILMN_226167	ANKRD35	NM_001081139.1	NM_001081139.1		213121	124487270	NM_001081139.1	Ankrd35	NP_001074608.1	ILMN_3157692	005220754	A	3172	CATCTCCACATACAGGAGTCATCTACTGAATGCTGCTCGGGGCTACATGG	3	+	96488189-96488238	3qF2.1	Mus musculus ankyrin repeat domain 35 (Ankrd35), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4732436F15Rik	4732436F15Rik
Mus musculus	RefSeq	ILMN_220359	ILMN_226167	ANKRD35	NM_001081139.1	NM_001081139.1		213121	124487270	NM_001081139.1	Ankrd35	NP_001074608.1	ILMN_1248776	005220408	S	2860	TCGGGAAATGACTCGATTGCGGGACACTGTGGCGGAGGAACGTCGCCGCA	3	+	96487877-96487926	3qF2.1	Mus musculus ankyrin repeat domain 35 (Ankrd35), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4732436F15Rik	4732436F15Rik
Mus musculus	RefSeq	ILMN_209444	ILMN_331129	LOC100047385	XM_001478039.1	XM_001478039.1		100047385	149267841	XM_001478039.1	LOC100047385	XP_001478089.1	ILMN_2595815	003440215	S	5509	CCTTCCCTCTAAGGGGTGTGTGCACTCTTTTTATTCCTGCTCTTGCAAAA					PREDICTED: Mus musculus similar to adenylate cyclase 5 (LOC100047385), mRNA.					
Mus musculus	RefSeq	ILMN_220282	ILMN_220282	ACY1	NM_025371.2	NM_025371.2		109652	141802669	NM_025371.2	Acy1	NP_079647.1	ILMN_2757699	002370148	S	1059	ATGACACCCACGGATGATTCAGATCCCTGGTGGGCAGCTTTCAGCGGAGC	9	-	106335909-106335958	9qF1	Mus musculus aminoacylase 1 (Acy1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid [goid 4046] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	Acy-1; 1110014J22Rik	Acy-1; 1110014J22Rik
Mus musculus	RefSeq	ILMN_220282	ILMN_220282	ACY1	NM_025371.2	NM_025371.2		109652	141802669	NM_025371.2	Acy1	NP_079647.1	ILMN_1213138	006590403	S	1232	GCTACATGACCATAATGAACGGCTGCATGAGGATATATTTCTCCGTGGGG	9	-	106335476-106335525	9qF1	Mus musculus aminoacylase 1 (Acy1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid [goid 4046] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	Acy-1; 1110014J22Rik	Acy-1; 1110014J22Rik
Mus musculus	RefSeq	ILMN_197812	ILMN_197812	LOC223628	XM_139430.2	XM_139430.2			38078417	XM_139430.2	LOC223628		ILMN_1216043	000620497	S	966	TCAGGATCCCCCAGAGCATGAATCCCACGCAGACACCCCAGAGTGTTCCT										
Mus musculus	RefSeq	ILMN_218107	ILMN_218107	EDG8	NM_053190.1	NM_053190.1		94226	16716488	NM_053190.1	Edg8	NP_444420.1	ILMN_2691735	003520437	S	1858	GGGATAAAGGAGAGCGGGGCTCCAAGAATGCTCAGAACCAGGTGATGTCT	9	-	21047873-21047922	9qA3	Mus musculus endothelial differentiation, sphingolipid G-protein-coupled receptor, 8 (Edg8), mRNA.				lpB4; S1P5	lpB4; S1P5
Mus musculus	RefSeq	ILMN_218107	ILMN_218107	EDG8	NM_053190.1	NM_053190.1		94226	16716488	NM_053190.1	Edg8	NP_444420.1	ILMN_2801385	005810273	S	2327	GACCTCTGAGGGCACCAGGCATGCACATGGTACAAAGATTGAATGCAGGC	9	-	21047404-21047453	9qA3	Mus musculus endothelial differentiation, sphingolipid G-protein-coupled receptor, 8 (Edg8), mRNA.				lpB4; S1P5	lpB4; S1P5
Mus musculus	MEEBO	ILMN_191027	ILMN_191027	MOAP1	scl0075760.1_152				31560853	NM_022323	Moap1		ILMN_1257115	006480386	S	4	AAACCGAAGGAGGACCGGCTCGAGTTATCAGCTGGCTAGCACATGGGTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	MEEBO	ILMN_191027	ILMN_191027	MOAP1	scl0075760.1_152				31560853	NM_022323	Moap1		ILMN_1224119	007000192	S	20	CTCCCTCTTCCTAACAACAGCAAACAATTCTTTTGGAGCAACGACCCGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_189001	ILMN_231991	ZFP410	NM_144833.2	NM_144833.2		52708	142362668	NM_144833.2	Zfp410	NP_659082.1	ILMN_1219787	000070167	S	2016	GCCTTGTTGCTTTGAAGAAGGGAGGGGTGCCAATTACACTGTAGCATTGC	12	+	85684370-85684419	12qD1	Mus musculus zinc finger protein 410 (Zfp410), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Apa1; MGC38535; D12Ertd748e	Apa1; MGC38535; D12Ertd748e
Mus musculus	RefSeq	ILMN_189001	ILMN_231991	ZFP410	NM_144833.2	NM_144833.2		52708	142362668	NM_144833.2	Zfp410	NP_659082.1	ILMN_1259006	006110685	S	1356	CGCTTCAGTTCCCAATAAAAACCTGGTGTCTATGAATTCCCAGTCCAGCC	12	+	85679626-85679675	12qD1	Mus musculus zinc finger protein 410 (Zfp410), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Apa1; MGC38535; D12Ertd748e	Apa1; MGC38535; D12Ertd748e
Mus musculus	Riken	ILMN_204752	ILMN_204752	ODZ1	ri|B930059M16|PX00164F10|AK047423|3447					AK047423	Odz1		ILMN_1242667	006940685	S	3388	GCAATTTGGGAGTCCTTGGGGGTAAACAACTTGTAGGCACAGCCTTGTAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]			
Mus musculus	RefSeq	ILMN_201432	ILMN_201432	LOC385154	XM_358090.1	XM_358090.1			38093689	XM_358090.1	LOC385154		ILMN_1256428	002070041	S	50	GCCCTGGAACCACAGCACCTCCAGAAGTCAGAGAACAATGCGGTGGCCCA										
Mus musculus	MEEBO	ILMN_218766	ILMN_218766	4930546C10RIK	scl51308.2_16				51770971	XM_484744	4930546C10Rik		ILMN_2699942	005900338	S	1458	GGTGCCTATCAAATGCTCACATCTCCATTCTGTCTTCTTGAGTGACTGGA										
Mus musculus	MEEBO	ILMN_186071	ILMN_186071	IGHV5S15_AF290966_IG_HEAVY_VARIABLE_5S15_49	IGHV5S15_AF290966_Ig_heavy_variable_5S15_49						IGHV5S15_AF290966_Ig_heavy_variable_5S15_49		ILMN_2432375	003290497	S	11	CAAGAGGCTGGAGTTGGTCGCAACCATTAATAGTAACGGTGGTAGCACCT										
Mus musculus	RefSeq	ILMN_198869	ILMN_198869	LOC234159	XM_146296.2	XM_146296.2			38089195	XM_146296.2	LOC234159		ILMN_1227678	003870762	S	5	GGCAGCTATCCCTCTCCAGAACTCTCCATAGTACTCAGCTATGCGCTGCG										
Mus musculus	RefSeq	ILMN_220407	ILMN_220407	ADAT1	NM_013925.2	NM_013925.2		30947	31542107	NM_013925.2	Adat1	NP_038953.1	ILMN_2977193	002260767	S	2716	GGCAGTAAGCAGCTGTATCAGCTGAGCAATCTTACCAGGTTCCTGTTCTG	8	-	114853974-114854023	8qE1	Mus musculus adenosine deaminase, tRNA-specific 1 (Adat1), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a tRNA molecule [goid 8251] [evidence ISS]	mADAT1; MMADAT1	mADAT1; MMADAT1
Mus musculus	RefSeq	ILMN_210394	ILMN_210394	DOK4	NM_053246.2	NM_053246.2		114255	133892638	NM_053246.2	Dok4	NP_444476.1	ILMN_1241168	004920392	S	2436	GGAGGGAGGCAAAACTGGCTCAGTTAGTGGCACGATGACGCATGAAGGAG	8	-	97387808-97387857	8qD1	Mus musculus docking protein 4 (Dok4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IPI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]	Interacting selectively with the insulin receptor [goid 5158] [evidence IEA];  [goid 5066] [evidence IPI]		
Mus musculus	MEEBO	ILMN_191682	ILMN_191682	TRPM1	scl0244027.6_17	XM_145667.2			28479402	XM_145667.2	Trpm1		ILMN_2481238	007200239	S	2	CCGGAGCACTCAGCATTCATGTGTGTCCTCACAATTCTTCATGTCTTTAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_211136	ILMN_211136	KCNN3	NM_080466.1	NM_080466.1		140493	17978283	NM_080466.1	Kcnn3	NP_536714.1	ILMN_2612915	007380491	S	2192	GGATCAGCTCCACCTCTTTCCCAACCCCATACACAAGTTCAAGCAGTTGC	3	+	89471248-89471297	3qF1	Mus musculus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 (Kcnn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 16286] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	SKCA3; MGC123422; MGC123421; SK3	SKCA3; MGC123422; MGC123421; SK3
Mus musculus	RefSeq	ILMN_222001	ILMN_211136	KCNN3	NM_080466.1	NM_080466.1		140493	17978283	NM_080466.1	Kcnn3	NP_536714.1	ILMN_2743254	007380598	S	348	GTTGCACTCTTCTCCCACGGCGTTCAGGGCCCCCACTTCAGCCAACTCTA	3	+	89324690-89324739	3qF1	Mus musculus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 (Kcnn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 16286] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	SKCA3; MGC123422; MGC123421; SK3	SKCA3; MGC123422; MGC123421; SK3
Mus musculus	RefSeq	ILMN_213797	ILMN_213797	VPS53	NM_026664.2	NM_026664.2		68299	31980872	NM_026664.2	Vps53	NP_080940.2	ILMN_2821336	002260543	S	2647	GGCCAGAGTCCTGAACAGCCGACTTCTGCAAACCCTCACACTGAGTCCTG	11	-	75862540-75862589	11qB5	Mus musculus vacuolar protein sorting 53 (yeast) (Vps53), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		RP23-147P4.2; 2310040I21Rik; 3100002B05Rik; 2010002A08Rik	RP23-147P4.2; 2310040I21Rik; 3100002B05Rik; 2010002A08Rik
Mus musculus	RefSeq	ILMN_213797	ILMN_213797	VPS53	NM_026664.2	NM_026664.2		68299	31980872	NM_026664.2	Vps53	NP_080940.2	ILMN_1258453	005560682	S	2561	TGCCCCAACACCGGAGCAGGAGTCATCCCGAATCCGCAAACTGGAGAAAC	11	-	75862626-75862675	11qB5	Mus musculus vacuolar protein sorting 53 (yeast) (Vps53), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		RP23-147P4.2; 2310040I21Rik; 3100002B05Rik; 2010002A08Rik	RP23-147P4.2; 2310040I21Rik; 3100002B05Rik; 2010002A08Rik
Mus musculus	RefSeq	ILMN_213797	ILMN_213797	VPS53	NM_026664.2	NM_026664.2		68299	31980872	NM_026664.2	Vps53	NP_080940.2	ILMN_2655295	003890040	S	2562	GCCCCAACACCGGAGCAGGAGTCATCCCGAATCCGCAAACTGGAGAAACT	11	-	75862625-75862674	11qB5	Mus musculus vacuolar protein sorting 53 (yeast) (Vps53), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		RP23-147P4.2; 2310040I21Rik; 3100002B05Rik; 2010002A08Rik	RP23-147P4.2; 2310040I21Rik; 3100002B05Rik; 2010002A08Rik
Mus musculus	RefSeq	ILMN_213108	ILMN_213108	SLC12A1	NM_183354.2	NM_183354.2		20495	119226230	NM_183354.2	Slc12a1	NP_899197.2	ILMN_3124491	006960242	A	3961	CCTGCTGGGTCAGTGGCCTGATTCTGCTTGGCCTCCTGAGAAGTTTGTGA	2	+	125055054-125055103	2qF1	Mus musculus solute carrier family 12, member 1 (Slc12a1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]	D630042G03Rik; mBSC1; AI788571; Nkcc2	D630042G03Rik; mBSC1; AI788571; Nkcc2
Mus musculus	RefSeq	ILMN_213108	ILMN_213108	SLC12A1	NM_183354.2	NM_183354.2		20495	119226230	NM_183354.2	Slc12a1	NP_899197.2	ILMN_3048630	004150240	I	883	GGTAACCTCTATCACTGGGTTGTCAACTTCTGCAATAGCAACAAACGGGT	2	+	124991908-124991954:124995149-124995151	2qF1	Mus musculus solute carrier family 12, member 1 (Slc12a1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]	D630042G03Rik; mBSC1; AI788571; Nkcc2	D630042G03Rik; mBSC1; AI788571; Nkcc2
Mus musculus	RefSeq	ILMN_213108	ILMN_213108	SLC12A1	NM_183354.2	NM_183354.2		20495	119226230	NM_183354.2	Slc12a1	NP_899197.2	ILMN_2746614	004280373	S	3896	GGCTCTCCTTAAGTTCTTATTGACAGGCTGGTATGGTGAAGGCAGGTGGC	2	+	125054989-125055038	2qF1	Mus musculus solute carrier family 12, member 1 (Slc12a1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]	D630042G03Rik; mBSC1; AI788571; Nkcc2	D630042G03Rik; mBSC1; AI788571; Nkcc2
Mus musculus	RefSeq	ILMN_213108	ILMN_213108	SLC12A1	NM_183354.2	NM_183354.2		20495	119226230	NM_183354.2	Slc12a1	NP_899197.2	ILMN_2633732	006040259	S	4146	CTGCTAGCTGGAGGTATATTAGGTAGGTGAGCAAGAGACCCATGTTCCAC	2	+	125055239-125055288	2qF1	Mus musculus solute carrier family 12, member 1 (Slc12a1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]	D630042G03Rik; mBSC1; AI788571; Nkcc2	D630042G03Rik; mBSC1; AI788571; Nkcc2
Mus musculus	MEEBO	ILMN_193626	ILMN_193626	2410080H04RIK	scl36827.30.403_46				27369721	NM_172522	2410080H04Rik		ILMN_1216606	007570523	S	14	GCCTTCACATAGCTAAGAGTTAGCACTAGGACATTTCGATCATGCAGAGC										
Mus musculus	RefSeq	ILMN_217304	ILMN_217304	VPS37B	NM_177876.4	NM_177876.4		330192	146198722	NM_177876.4	Vps37b	NP_808544.1	ILMN_2681670	005820292	S	2437	GACCTTGCCAGGCCATAGCTGGCACTGGGGCTGTAAAGCTGTAGAACTCT				5qF	Mus musculus vacuolar protein sorting 37B (yeast) (Vps37b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		2300007F24Rik; FLJ12750; AI415429; BC026744; MGC25614	2300007F24Rik; FLJ12750; AI415429; BC026744; MGC25614
Mus musculus	RefSeq	ILMN_216797	ILMN_216797	OLFR1080	NM_146409.2	NM_146409.2		258404	110665724	NM_146409.2	Olfr1080	NP_666521.2	ILMN_1248928	006480050	S	759	GTGGGTCACACCTGACAGTAGTTACAGTATTCTATGGGACACTGATATTT	2	-	86393508-86393557	2qD	Mus musculus olfactory receptor 1080 (Olfr1080), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR192-1	MOR192-1
Mus musculus	MEEBO	ILMN_193489	ILMN_193489	5830472F04RIK	scl14561.1.1_200						5830472F04Rik		ILMN_2497673	001070458	S	2	AAGTGTACTCACTGTTATGGAGACCGCGTTGGCATTGGGGTGTAGTGGGC										
Mus musculus	MEEBO	ILMN_191811	ILMN_191811	1700028D13RIK	scl27414.4.1_33						1700028D13Rik		ILMN_2482401	007550692	S	19	CAAGAGCTTAGCAGTGACCACTTGTCTACTCATCGGGGGACGGCCATCAG										
Mus musculus	Riken	ILMN_204986	ILMN_204986	NCAML-PENDING	ri|E130106M13|PX00091O10|AK053544|2030					AK053544	Ncaml-pending		ILMN_2569127	001090170	S	1759	TGCACTTTGGTGGAAGGGCAGGGGAACCGGGCCACCTATAGTAGAAGACA										
Mus musculus	RefSeq	ILMN_198753	ILMN_198753	LOC278085	XM_205191.1	XM_205191.1			25030548	XM_205191.1	LOC278085		ILMN_1228229	000620605	S	389	CTACCAAGGAAGAAATGCTGAGGCAAGCTGAAACTCCCCACAATGGGATG										
Mus musculus	MEEBO	ILMN_190727	ILMN_190727	IGHV8S6_U23021_IG_HEAVY_VARIABLE_8S6_61	IGHV8S6_U23021_Ig_heavy_variable_8S6_61						IGHV8S6_U23021_Ig_heavy_variable_8S6_61		ILMN_1253449	004890475	S	15	GGGTTTTCACTGAGCACTTTTGGTATGGGTGTGAGCTGGATTCGTCAGCC										
Mus musculus	RefSeq	ILMN_199547	ILMN_199547	LOC383618	XM_357159.1	XM_357159.1			38074142	XM_357159.1	LOC383618		ILMN_1249711	000050474	S	89	CCTGCAAAGGGAGCACCTCAACACCTGCAAAAGGAGAACCTCGACACCTG										
Mus musculus	RefSeq	ILMN_238872	ILMN_238872	PCBD2	NM_028281.1	NM_028281.1		72562	52421793	NM_028281.1	Pcbd2	NP_082557.1	ILMN_2876775	003310538	S	317	CAAAGTCCAGATAACCCTCACCTCGCATGACTGTGGCGGCCTGACCAAGC	13	+	55876805-55876808:55877966-55878011	13qB1	Mus musculus pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 (Pcbd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]	The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of nonidentical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51291] [evidence IPI]; The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits [goid 51289] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: L-phenylalanine + tetrahydrobiopterin + O2 = L-tyrosine + 4-alpha-hydroxytetrahydrobiopterin [goid 4505] [evidence IDA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7,8-tetrahydro-4-alpha-hydroxypterin = (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7,8-dihydro-6H-pterin + H2O [goid 8124] [evidence IEA]	2700061N24Rik; Dcoh2; Dcohm	2700061N24Rik; Dcoh2; Dcohm
Mus musculus	RefSeq	ILMN_218702	ILMN_238872	PCBD2	NM_028281.1	NM_028281.1		72562	52421793	NM_028281.1	Pcbd2	NP_082557.1	ILMN_2699126	004540278	S	351	GGCGGCCTGACCAAGCGGGATGTGAAGTTGGCCCAGTTCATTGAAAAAGC	13	+	55877996-55878045	13qB1	Mus musculus pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 (Pcbd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]	The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of nonidentical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51291] [evidence IPI]; The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits [goid 51289] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: L-phenylalanine + tetrahydrobiopterin + O2 = L-tyrosine + 4-alpha-hydroxytetrahydrobiopterin [goid 4505] [evidence IDA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7,8-tetrahydro-4-alpha-hydroxypterin = (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7,8-dihydro-6H-pterin + H2O [goid 8124] [evidence IEA]	2700061N24Rik; Dcoh2; Dcohm	2700061N24Rik; Dcoh2; Dcohm
Mus musculus	RefSeq	ILMN_212697	ILMN_235305	LOC675759	XM_984967.1	XM_984967.1		675759	94411119	XM_984967.1	LOC675759	XP_990061.1	ILMN_1223708	007570075	S	251	CTGATAATTATGCAACACATTATGCGGAGTCTGTGAAAGGGAGGTTCACC					PREDICTED: Mus musculus similar to Igh-1a protein (LOC675759), mRNA.					
Mus musculus	RefSeq	ILMN_212697	ILMN_235305	LOC675759	XM_984967.1	XM_984967.1		675759	94411119	XM_984967.1	LOC675759	XP_990061.1	ILMN_1217886	004780301	S	147	CTCCTGTGTTGCCTCTGGATTCACTTTCAGTAACTACTGGATGAACTGGG					PREDICTED: Mus musculus similar to Igh-1a protein (LOC675759), mRNA.					
Mus musculus	MEEBO	ILMN_210992	ILMN_210992	BC018507	scl0218333.1_228	XM_358313.1			38075356	XM_358313.1	BC018507		ILMN_2625645	002940136	S	987	GCCAGTTGGGTTTGAAGGAGGGGTTTCCAACTGCTGTGAAGAATATCAGC										
Mus musculus	RefSeq	ILMN_216485	ILMN_216485	GRP	NM_175012.2	NM_175012.2		225642	31341342	NM_175012.2	Grp	NP_778177.1	ILMN_2671608	007550138	S	685	CTTTCAACCGCAACTAAACTCGTGATTTTTCGAGCAGCATCTTCTGGTTT	18	+	66046055-66046104	18qE1	Mus musculus gastrin releasing peptide (Grp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence ISO]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence ISO]	BLP; MGC37475	BLP; MGC37475
Mus musculus	RefSeq	ILMN_193083	ILMN_237725	DNAJC11	NM_172704.2	NM_172704.2		230935	142353982	NM_172704.2	Dnajc11	NP_766292.1	ILMN_2643177	001050017	S	3612	GCCCGTGTTTTAAGGAGTGTGTAAGTCTTGAGATTTCCCAGTGTGGGTCT	4	+	151350564-151350613	4qE2	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 11 (Dnajc11), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	E030019A03Rik	E030019A03Rik
Mus musculus	RefSeq	ILMN_193083	ILMN_237725	DNAJC11	NM_172704.2	NM_172704.2		230935	142353982	NM_172704.2	Dnajc11	NP_766292.1	ILMN_1237476	003140301	S	246	GAGCTATCTATGATATATACGGGAAGAGAGGCCTGGAGATGGAAGGATGG	4	+	151326972-151327021	4qE2	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 11 (Dnajc11), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	E030019A03Rik	E030019A03Rik
Mus musculus	RefSeq	ILMN_219906	ILMN_219906	SDC3	NM_011520.3	NM_011520.3		20970	110349994	NM_011520.3	Sdc3	NP_035650.2	ILMN_2715042	006760762	S	4812	AAGATACCAAGGCCTGGTCCATCCTTACCATGGGCGCTCGTACACCCCTG	4	+	130382073-130382122	4qD2.3	Mus musculus syndecan 3 (Sdc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	MGC65603; syn-3; Synd3; mKIAA0468; MGC69616	MGC65603; syn-3; Synd3; mKIAA0468; MGC69616
Mus musculus	MEEBO	ILMN_187787	ILMN_187787	D15MIT260	scl0027008.1_147						D15Mit260		ILMN_2447100	003420743	S	13	GTGGTCAATAACAGATCCTTTTCTCACCCGTTTATCAAGGCCAACTTCCT										
Mus musculus	Riken	ILMN_204426	ILMN_204426	ESR1	ri|A430027L01|PX00135O02|AK039911|2109					AK039911	Esr1		ILMN_1221362	004200626	S	1847	AGCTGTGGTACTGTGGGGGGAAAGTAGTAGTGTGCTATGGGATTAGGGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of mitosis. Mitosis is the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 45839] [evidence NAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence NAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211698	ILMN_243354	EG268795	XM_921134.3	XM_921134.3		268795	149266524	XM_921134.3	EG268795	XP_926227.1	ILMN_2618642	000070220	S	69	GTCAAGAAGCAGGAGGCCAAGAAGGTGGTCAACCCTCTGTTCGAGAAGAG				15qB3.1	PREDICTED: Mus musculus predicted gene, EG268795, transcript variant 4 (EG268795), mRNA.					
Mus musculus	RefSeq	ILMN_217267	ILMN_239160	D12ERTD647E	NM_194068.1	NM_194068.1		52668	34732720	NM_194068.1	D12Ertd647e	NP_919044.1	ILMN_2681232	001110280	S	714	GGCAGATATGGCGATAGAGGTGGCAGACATTTCAACAGAAGAGGCACTGC	12	+	104678303-104678352	12qE	Mus musculus DNA segment, Chr 12, ERATO Doi 647, expressed (D12Ertd647e), transcript variant 4, mRNA.				2900026P10Rik; 1110013J02Rik; ISG12a; MGC149996	2900026P10Rik; 1110013J02Rik; ISG12a; MGC149996
Mus musculus	RefSeq	ILMN_198747	ILMN_198747	GM370	XM_141921.1	XM_141921.1		212938	20984541	XM_141921.1	Gm370	XP_141921.1	ILMN_1246143	000730133	S	730	CCTGGATCAGAGAAATTCACTACTGAGCCACACCTAGAAGCAATTATGCC	X	-	87444552-87444601	XqC1	PREDICTED: Mus musculus gene model 370, (NCBI) (Gm370), mRNA.					
Mus musculus	RefSeq	ILMN_221153	ILMN_221153	EIF1B	NM_026892.1	NM_026892.1		68969	21312158	NM_026892.1	Eif1b	NP_081168.1	ILMN_2731629	005130754	S	635	CCACTCACACCTGCATGGCTACAGAAAACACGGGGTATGTAGGCTCCTGA	9	+	120343778-120343827	9qF4	Mus musculus eukaryotic translation initiation factor 1B (Eif1b), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	3110001N14Rik; 1500010M16Rik; Gc20	3110001N14Rik; 1500010M16Rik; Gc20
Mus musculus	MEEBO	ILMN_212691	ILMN_212691	DMBT1	scl31983.48.1_26	NM_007769.1			6681026	NM_007769.1	Dmbt1		ILMN_2629239	007550500	S	6320	GAGAGCCTGACGCTTGGCACCCAGATACATGGTGACTAGGATTCCCTTAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation [goid 30858] [evidence IDA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IDA]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215674	ILMN_215674	5830482F20RIK	NM_177158.2	NM_177158.2		320435	31342943	NM_177158.2	5830482F20Rik	NP_796132.1	ILMN_2662316	004390458	S	2596	ACGCCATGCGGGAGACAAGGAGAACGAACGGATGGGAACAAGAGAGACGG	7	+	28507456-28507505	7qA3	Mus musculus RIKEN cDNA 5830482F20 gene (5830482F20Rik), mRNA.				9930116N10Rik; MGC51433	9930116N10Rik; MGC51433
Mus musculus	MEEBO	ILMN_186382	ILMN_186382	AIPL1	scl39975.6_48				21426862	NM_053245	Aipl1		ILMN_2677191	005310537	S	743	GGTGTTGGAGCACACCAGCGACATTCTACGACACCACCCAGGGATCGTGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm [goid 7603] [evidence IMP]; The enzymatic addition of a farnesyl moiety to a protein as a posttranslational modification [goid 18343] [evidence ISO]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cGMP [goid 30823] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function [goid 1895] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a farnesylated protein [goid 1918] [evidence ISO]		
Mus musculus	MEEBO	ILMN_186382	ILMN_186382	AIPL1	scl39975.6_48				21426862	NM_053245	Aipl1		ILMN_2435056	004280066	S	15	CCCTCCCCCAAACCTCAAATTAACAAAGGGCACAGGACAACTACCATTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm [goid 7603] [evidence IMP]; The enzymatic addition of a farnesyl moiety to a protein as a posttranslational modification [goid 18343] [evidence ISO]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cGMP [goid 30823] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function [goid 1895] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a farnesylated protein [goid 1918] [evidence ISO]		
Mus musculus	RefSeq	ILMN_191352	ILMN_254961	HNRPA0	XM_891442.2	XM_891442.2		77134	94395153	XM_891442.2	Hnrpa0	XP_896535.1	ILMN_1247047	001470487	S	2343	GGGCTTCCCGGGAGTGTAGTTAACAGCCCGCATCAGTCACTTTTTCTACG	13	-	58227525-58227574	13qB1	PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein A0, transcript variant 2 (Hnrpa0), mRNA.					
Mus musculus	RefSeq	ILMN_209583	ILMN_209583	JARID2	NM_021878.2	NM_021878.2		16468	31981212	NM_021878.2	Jarid2	NP_068678.1	ILMN_2597199	002100152	S	4048	GTTCAAGTTTTTGTACGTAGATATCTAGATACTGCAGTCAGGTTTGGAAG	13	+	45015473-45015522	13qA5	Mus musculus jumonji, AT rich interactive domain 2 (Jarid2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	AU045941; Jmj; C79929; jumonji; AI317256; C79931	AU045941; Jmj; C79929; jumonji; AI317256; C79931
Mus musculus	MEEBO	ILMN_186523	ILMN_186523	ZFP346	scl44742.7_504				6754395	NM_012017	Zfp346		ILMN_2449968	002900259	S	11	GTCGCACTACCTGGGGAAGACCCACGCAAAGAGCCTAAAGCTGAAGCAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211781	ILMN_254847	4632411B12RIK	NM_172652.3	NM_172652.3		226976	146198789	NM_172652.3	4632411B12Rik	NP_766240.1	ILMN_2647372	004150333	S	548	TAACAAGATCCTCAAAGCCCTGCAGTCTGACCGGCTTGCACGATTGGCCA				1qB	Mus musculus RIKEN cDNA 4632411B12 gene (4632411B12Rik), mRNA.				AI647574; C85723; mKIAA1310; AI431067; 4932435K23	AI647574; C85723; mKIAA1310; AI431067; 4932435K23
Mus musculus	MEEBO	ILMN_185846	ILMN_185846	SCL000179.1_19	scl000179.1_19	BC068122.1			45829711	BC068122.1	scl000179.1_19		ILMN_2430502	004540274	S	11	ACGCCATGGAGGATTTTCAGACAGATCTGTCTTTGACCTAAAGCATGTGC										
Mus musculus	RefSeq	ILMN_207470	ILMN_207470	KIF1B	NM_008441.1	NM_008441.1			33469082	NM_008441.1	Kif1b		ILMN_2587761	002490523	I	4734	GCACACAGATCCTCTAGCAAGGACAGCTAAGTCCTGCAAACAGTCACTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence NAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence TAS]		
Mus musculus	RefSeq	ILMN_219048	ILMN_219048	KPNB1	NM_008379.3	NM_008379.3		16211	88014719	NM_008379.3	Kpnb1	NP_032405.3	ILMN_1230411	003800452	S	5827	TGAGCCCAACTTTATTAACCAAAACTGATACCACCACCTTTATCTTCTGA	11	-	97021056-97021105	11qD	Mus musculus karyopherin (importin) beta 1 (Kpnb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence ISO]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane [goid 6610] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	IPOB; AA409963; MGC8315; Impnb	IPOB; AA409963; MGC8315; Impnb
Mus musculus	MEEBO	ILMN_223930	ILMN_223930	2810051F02RIK	scl072704.2_241				21312219	NM_028330	2810051F02Rik		ILMN_2771721	006580035	S	969	CCTGCCAGGCCATTAGAAAACTACAGAAAGATTTTAAACACATGTCTGAA										
Mus musculus	RefSeq	ILMN_217562	ILMN_217562	OLFR16	NM_008763.1	NM_008763.1		18313	6679171	NM_008763.1	Olfr16	NP_032789.1	ILMN_1217706	006180500	S	608	CATTTGTAATTCTTGTGCCCATAGGGCTGATATTTATCTCCTATGTGCTC	1	+	174887535-174887584	1qH3	Mus musculus olfactory receptor 16 (Olfr16), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-13; MOR23	MOR267-13; MOR23
Mus musculus	RefSeq	ILMN_217989	ILMN_217989	SLC7A7	NM_011405.3	NM_011405.3		20540	142370571	NM_011405.3	Slc7a7	NP_035535.2	ILMN_1240318	007320349	S	1579	CTTTGTGGGCCTTTCTATTGTGGGTCAGCTTTATCTACGCTGGAAGGACC	14	-	54992646-54992695	14qC2	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 7 (Slc7a7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	my+lat1; AI790233	my+lat1; AI790233
Mus musculus	RefSeq	ILMN_219441	ILMN_219441	OLFR6	NM_206897.1	NM_206897.1		233670	46047479	NM_206897.1	Olfr6	NP_996780.1	ILMN_2708938	000540180	S	774	CCGACCTCGGGCCATTGCTTCGTTTAATTCTAACAAGCTGATCTCAGCCA	7	-	114099625-114099674	7qE3	Mus musculus olfactory receptor 6 (Olfr6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	M50; MOR103-16	M50; MOR103-16
Mus musculus	RefSeq	ILMN_216511	ILMN_232298	1700021P04RIK	XM_988914.1	XM_988914.1		75521	94406151	XM_988914.1	1700021P04Rik	XP_994008.1	ILMN_1258987	005960519	S	280	CTGGTGTGGCAGATGAAAGAGACACTTACAGCTCTCAATGTGGCTATCAG				19qB	PREDICTED: Mus musculus RIKEN cDNA 1700021P04 gene (1700021P04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194832	ILMN_194832	V1RH12	NM_134237.1	NM_134237.1		171271	21955269	NM_134237.1	V1rh12	NP_598998.1	ILMN_2785828	004260482	S	829	GCGATCTTCAGCCCCTTTGTGCTGATTCAGAGGGATGGACTTATACCTGT	13	-	23275515-23275564	13qA3.1	Mus musculus vomeronasal 1 receptor, H12 (V1rh12), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	MEEBO	ILMN_193683	ILMN_193683	RPS6KA5	scl3416.1.1_1				23956385	NM_153587	Rps6ka5		ILMN_2499479	004290059	S	2	CCGAGTCACACATGGTGTAATTGTGTATGTCTAATATATTGAAAGGCAAG						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_260028	ILMN_260028	PLXND1	NM_026376.3	NM_026376.3		67784	153792703	NM_026376.3	Plxnd1	NP_080652.2	ILMN_3162354	004050079	S	5875	TGGAGGCCAACCCCACAGCCCGCAGGACCCAGCTACAGCACAAGTTTGAA				6qE3	Mus musculus plexin D1 (Plxnd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 17154] [evidence IPI]	6230425C21Rik	6230425C21Rik
Mus musculus	RefSeq	ILMN_201591	ILMN_260028	PLXND1	NM_026376.3	NM_026376.3		67784	153792703	NM_026376.3	Plxnd1	NP_080652.2	ILMN_1214608	006280167	S	6545	CAGGAAAGGGAGGAAGGCGAGGATGCAGGGCTGTAGCTGGACTACTCAGT				6qE3	Mus musculus plexin D1 (Plxnd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 17154] [evidence IPI]	6230425C21Rik	6230425C21Rik
Mus musculus	RefSeq	ILMN_247837	ILMN_247837	DNAHC2	NM_001081330.1	NM_001081330.1		327954	124486772	NM_001081330.1	Dnahc2	NP_001074799.1	ILMN_3123043	002900747	A	13378	GTCCCTGCTATTATTATCCCAACCGGGCAGGCAGCACAGATCGAGCCTCC	11	-	69234587-69234636	11qB3	Mus musculus dynein, axonemal, heavy chain 2 (Dnahc2), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	D330014H01Rik; 4930564A01; Dnhd3; 2900022L05Rik; D130094J20; RP23-56I20.8	D330014H01Rik; 4930564A01; Dnhd3; 2900022L05Rik; D130094J20; RP23-56I20.8
Mus musculus	RefSeq	ILMN_247837	ILMN_247837	DNAHC2	NM_001081330.1	NM_001081330.1		327954	124486772	NM_001081330.1	Dnahc2	NP_001074799.1	ILMN_3047422	005670487	I	411	ACTTTGAATCTTATTCTGTCCTGTTCTAGAGCTGGAACTCGGGATCTTGC	11	-	69352903-69352952	11qB3	Mus musculus dynein, axonemal, heavy chain 2 (Dnahc2), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	D330014H01Rik; 4930564A01; Dnhd3; 2900022L05Rik; D130094J20; RP23-56I20.8	D330014H01Rik; 4930564A01; Dnhd3; 2900022L05Rik; D130094J20; RP23-56I20.8
Mus musculus	Riken	ILMN_204135	ILMN_204135	B230311C12RIK	ri|B230311C12|PX00159I06|AK045793|2395					AK045793	B230311C12Rik		ILMN_1228104	005490088	S	1223	ATGTGTGCTGATGGTGCGTGTATGTGTGCTGATGGTGTGTGTCTGTGTGC										
Mus musculus	RefSeq	ILMN_197757	ILMN_197757	LOC381014	XM_358486.1	XM_358486.1			38077833	XM_358486.1	LOC381014		ILMN_1221979	006510288	S	237	ATTCCGAGTCCCAGGACACCTTCCCACCCCAGCAGGAAGGCCAGCGTTTT										
Mus musculus	RefSeq	ILMN_198683	ILMN_198683	LOC237085	XM_142201.1	XM_142201.1			20985772	XM_142201.1	LOC237085		ILMN_1218999	006620048	S	299	ACATGCTGCTGGCCAACAAGGGTGTCCGCAATGTATGCAGCATCTGTCTG										
Mus musculus	RefSeq	ILMN_189947	ILMN_237056	1700072O05RIK	XM_987216.1	XM_987216.1		73505	94378063	XM_987216.1	1700072O05Rik	XP_992310.1	ILMN_1221428	000620292	S	502	GCACCCATCGGAGGGAATTTTATCAATGGAGATTTGAGATCCAGGAAGCC	6	+	120524056-120524105	6qF1	PREDICTED: Mus musculus RIKEN cDNA 1700072O05 gene (1700072O05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217404	ILMN_247252	COX5A	NM_007747.2	NM_007747.2		12858	112181181	NM_007747.2	Cox5a	NP_031773.2	ILMN_2682800	004730520	S	330	GGTTCCTGAGCCCAAAATCATTGATGCTGCATTGCGAGCATGTAGACGGT	9	+	57378076-57378125	9qB	Mus musculus cytochrome c oxidase, subunit Va (Cox5a), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]	CcOX; AA959768	CcOX; AA959768
Mus musculus	Riken	ILMN_204467	ILMN_204467	ANXA11	ri|A830099O17|PX00157G08|AK044203|1626					AK044203	Anxa11		ILMN_1225258	001400767	S	1458	CTGAAATAAGGGATGTCAGAGTGGTCGGGCAGGCAGAATCACAGCCTCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine [goid 8429] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IDA]		
Mus musculus	MEEBO	ILMN_192903	ILMN_192903	CD151	scl012476.8_4				6753333	NM_009842	Cd151		ILMN_1235688	001400630	S	1	TGATCTGCAGTAAGTCTGGGGAGAACCTGAGTACACCACTACACGTTGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_192903	ILMN_192903	CD151	scl012476.8_4				6753333	NM_009842	Cd151		ILMN_2492403	006450390	S	2	GATCTGCAGTAAGTCTGGGGAGAACCTGAGTACACCACTACACGTTGGGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_198651	ILMN_319978	EG668725	XM_001471921.1	XM_001471921.1		668725	149257113	XM_001471921.1	EG668725	XP_001471971.1	ILMN_1258939	000380487	S	137	GTCGCATCATAGCTTCCACGCAGAAACTTCTCACGTTCTCCTCACCCAAC				7qB4	PREDICTED: Mus musculus predicted gene, EG668725 (EG668725), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217290	ILMN_217290	FECH	NM_007998.5	NM_007998.5		14151	145966846	NM_007998.5	Fech	NP_032024.2	ILMN_2710731	004260672	S	584	TCCGGTACGTCCATCCCCTGACAGAAGAGGCAATTGAAGAGATGGAGAGA				18qE1	Mus musculus ferrochelatase (Fech), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence TAS]	The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IMP]; The series of events in which an ultraviolet radiation (UV light) stimulus is received by a cell and converted into a molecular signal. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9589] [evidence IMP]; The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence TAS]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the reaction: protoporphyrin + Fe2+ = protoheme + 2 H+ [goid 4325] [evidence IDA]	Fcl; fch; AI894116	Fcl; fch; AI894116
Mus musculus	RefSeq	ILMN_217290	ILMN_217290	FECH	NM_007998.5	NM_007998.5		14151	145966846	NM_007998.5	Fech	NP_032024.2	ILMN_1228534	003420291	S	834	CCATTTTCCAGAGGAGAAGAGAAGCGAGGTGGTCATTCTGTTTTCTGCCC				18qE1	Mus musculus ferrochelatase (Fech), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence TAS]	The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IMP]; The series of events in which an ultraviolet radiation (UV light) stimulus is received by a cell and converted into a molecular signal. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9589] [evidence IMP]; The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence TAS]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the reaction: protoporphyrin + Fe2+ = protoheme + 2 H+ [goid 4325] [evidence IDA]	Fcl; fch; AI894116	Fcl; fch; AI894116
Mus musculus	RefSeq	ILMN_217290	ILMN_217290	FECH	NM_007998.5	NM_007998.5		14151	145966846	NM_007998.5	Fech	NP_032024.2	ILMN_1229519	006620689	S	2331	GCCATCCTAATCTTGACTGAGTGCTTATTTTATAAAGTTGACTGTGTCTG				18qE1	Mus musculus ferrochelatase (Fech), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence TAS]	The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IMP]; The series of events in which an ultraviolet radiation (UV light) stimulus is received by a cell and converted into a molecular signal. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9589] [evidence IMP]; The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence TAS]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the reaction: protoporphyrin + Fe2+ = protoheme + 2 H+ [goid 4325] [evidence IDA]	Fcl; fch; AI894116	Fcl; fch; AI894116
Mus musculus	Riken	ILMN_205869	ILMN_205869	C130046N05RIK	ri|C130046N05|PX00169H16|AK048290|2925					AK048290	C130046N05Rik		ILMN_1223290	000110176	S	2648	CAATGGCTTCTTCCCACAGCTTGTCTATTCTAGGTAGTGGCATGGTGACC										
Mus musculus	RefSeq	ILMN_198604	ILMN_198604	LOC333917	XM_290025.2	XM_290025.2			38086391	XM_290025.2	LOC333917		ILMN_2532279	001710121	S	241	CTGCCCTTCCCCAGGAAGCTATGGACCATAGTGCAGAATGAGTCGTTCAA										
Mus musculus	MEEBO	ILMN_192388	ILMN_192388	IGHV1S123_AF025448_IG_HEAVY_VARIABLE_1S123_197	IGHV1S123_AF025448_Ig_heavy_variable_1S123_197						IGHV1S123_AF025448_Ig_heavy_variable_1S123_197		ILMN_2487626	001820553	S	20	AGCAATGGTGGTACTAACTTCAATGAGAAGTTCAAGAGCAAGGCCACACT										
Mus musculus	RefSeq	ILMN_223733	ILMN_223733	FBXL13	NM_177076.2	NM_177076.2		320118	31342745	NM_177076.2	Fbxl13	NP_796050.1	ILMN_3075927	004050338	I	82	ACGCAGTGCCCACCCCCAGGCTAAGGAGCTACTTCAGGGACAAGTACATT	5	-	21157298-21157347	5qA3	Mus musculus F-box and leucine-rich repeat protein 13 (Fbxl13), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921539K22Rik	4921539K22Rik
Mus musculus	RefSeq	ILMN_223733	ILMN_223733	FBXL13	NM_177076.2	NM_177076.2		320118	31342745	NM_177076.2	Fbxl13	NP_796050.1	ILMN_2768346	004540066	S	2425	AGACTCCAAACACCAATAGGAAAACAAAACATCTACAACAATTTCCCTTC	5	-	20995727-20995759:20995760-20995776	5qA3	Mus musculus F-box and leucine-rich repeat protein 13 (Fbxl13), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921539K22Rik	4921539K22Rik
Mus musculus	RefSeq	ILMN_223733	ILMN_223733	FBXL13	NM_177076.2	NM_177076.2		320118	31342745	NM_177076.2	Fbxl13	NP_796050.1	ILMN_3155021	003450446	A	2225	CTGCAAGTCCATCTCTCCGGCAGCGGCTCAGAAAATGTCCTCTGTGGTCC	5	-	20995927-20995961:20998037-20998051	5qA3	Mus musculus F-box and leucine-rich repeat protein 13 (Fbxl13), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921539K22Rik	4921539K22Rik
Mus musculus	Riken	ILMN_207227	ILMN_207227	E330007H08RIK	ri|E330007H08|PX00675B14|AK087693|4178					AK087693	E330007H08Rik		ILMN_1212898	001410477	S	3887	CTTCTGTTCCAGAGGATTTGATGCACTCTTCCGGCCTCCACAGGCACTAG										
Mus musculus	RefSeq	ILMN_185096	ILMN_256982	KCNC2	NM_001025581.1	NM_001025581.1		268345	70980538	NM_001025581.1	Kcnc2	NP_001020752.1	ILMN_1234447	001410192	S	1703	GACGACAGTACAGGAAGTGAGCCGCCATTATCACCTCCAGAAAGGCTCCC	10	+	111895557-111895606	10qD2	Mus musculus potassium voltage gated channel, Shaw-related subfamily, member 2 (Kcnc2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	Kv3.2; AW047325; KShIIIA; B230117I07	Kv3.2; AW047325; KShIIIA; B230117I07
Mus musculus	RefSeq	ILMN_185096	ILMN_256982	KCNC2	NM_001025581.1	NM_001025581.1		268345	70980538	NM_001025581.1	Kcnc2	NP_001020752.1	ILMN_1221793	002450170	S	3021	CCCGAAGCTTAAACAACATAGCGGGCTTGGCAGGCAATGCTCTGAGACTC	10	+	111900185-111900234	10qD2	Mus musculus potassium voltage gated channel, Shaw-related subfamily, member 2 (Kcnc2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	Kv3.2; AW047325; KShIIIA; B230117I07	Kv3.2; AW047325; KShIIIA; B230117I07
Mus musculus	RefSeq	ILMN_185096	ILMN_256982	KCNC2	NM_001025581.1	NM_001025581.1		268345	70980538	NM_001025581.1	Kcnc2	NP_001020752.1	ILMN_2674015	002710241	S	1746	GGCTCCCTATCAGACGCTCTAGTACCAGAGACAAAAACAGAAGAGGGGAA	10	+	111895600-111895649	10qD2	Mus musculus potassium voltage gated channel, Shaw-related subfamily, member 2 (Kcnc2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	Kv3.2; AW047325; KShIIIA; B230117I07	Kv3.2; AW047325; KShIIIA; B230117I07
Mus musculus	RefSeq	ILMN_201363	ILMN_201363	LOC386501	XM_359350.1	XM_359350.1			38092213	XM_359350.1	LOC386501		ILMN_1219143	002760446	S	170	AGGAAGAGGGGAAAAGGCTGGAGCATGTCACAGAGCATTGCCGGAGGGTC										
Mus musculus	RefSeq	ILMN_222648	ILMN_222648	PCP4	NM_008791.2	NM_008791.2		18546	52694684	NM_008791.2	Pcp4	NP_032817.1	ILMN_2752830	002970019	S	412	CCATCCATCAAGAAATGAAAAGAACAATACCCTAGAGAGAAGTCATCCTC	16	+	96747171-96747220	16qC4	Mus musculus Purkinje cell protein 4 (Pcp4), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	P16Rimb19; Pcp-4	P16Rimb19; Pcp-4
Mus musculus	MEEBO	ILMN_188451	ILMN_188451	CLDN22	scl0075677.1_73				51764106	XM_357880	Cldn22		ILMN_2772273	001740521	S	621	CCAGCAGCATCTGGAGCTGAAGCAAGCCAATCCAGAAATCTAAGCCCGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218011	ILMN_218011	TFB1M	NM_146074.1	NM_146074.1		224481	22122568	NM_146074.1	Tfb1m	NP_666186.1	ILMN_2690441	000940356	S	1120	CTCTGTAAAGACAGATACCGATGACCTCGTGACTTTACTATCCAGCTTGG	17	-	3519420-3519469	17qA1	Mus musculus transcription factor B1, mitochondrial (Tfb1m), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor [goid 179] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule [goid 8649] [evidence IEA]	MGC41387; AI429207	MGC41387; AI429207
Mus musculus	Riken	ILMN_202126	ILMN_202126	AZI2	ri|2900003F04|ZX00068C19|AK013480|690					AK013480	Azi2		ILMN_2547209	005690091	S	599	CCTCTAGCGCGTCCTTTCCACTCAGCGGCAACTGGGATTCCGTGAGATTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]			
Mus musculus	Riken	ILMN_202238	ILMN_202238	4930403O06RIK	ri|4930403O06|PX00029B22|AK015068|1185					AK015068	4930403O06Rik		ILMN_2548043	004200300	S	282	GCTCTCTTCCGACTATGGCGGCCAGACGGCGGGAGTGAAGCCTGTAGTTC										
Mus musculus	Riken	ILMN_205111	ILMN_205111	D930010L03RIK	ri|D930010L03|PX00200M22|AK053001|1561					AK053001	D930010L03Rik		ILMN_1213658	001400154	S	1296	GCCAGAGATGGACCCAAGCCCTCAAAGCTTCCAGACACAAGGCTTGGTTG										
Mus musculus	Riken	ILMN_206208	ILMN_206208	C130020A06RIK	ri|C130020A06|PX00168E09|AK081479|2987					AK081479	C130020A06Rik		ILMN_1233467	003190592	S	2722	CCCTTACCTTAAACCTCTGGAACAGGTGTTGGTAAGAGAAAGACCAATGT										
Mus musculus	RefSeq	ILMN_184726	ILMN_230600	AKAP7	NM_018747.4	NM_018747.4		432442	145864492	NM_018747.4	Akap7	NP_061217.3	ILMN_2421055	005810131	S	1954	GGAAGAGTTTTTAATAATGGTAGTCCAACAAGCAATGCTGATTTCAACCT				10qA4	Mus musculus A kinase (PRKA) anchor protein 7 (Akap7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence ISA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISS]	Akap18; 6430401D08; AKAP15; AI662165; BB170514	Akap18; 6430401D08; AKAP15; AI662165; BB170514
Mus musculus	MEEBO	ILMN_186584	ILMN_186584	NUSAP1	scl20415.11_12				19527067	NM_133851	Nusap1		ILMN_2436761	007000719	S	20	TCTATAATAACAAATTAAAATGAAGGCATTCAAAAATAAACTGAGTACTT						A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence ISA]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence ISA]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence ISA]; The cell cycle process whereby the directed movement of the mitotic spindle to a specific location in the cell occurs [goid 40001] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence ISA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192329	ILMN_251790	ABCC1	NM_008576.2	NM_008576.2		17250	60218873	NM_008576.2	Abcc1	NP_032602.1	ILMN_1248173	000240524	S	553	TCCACGTTCTATCTGTACTTCACCCTTGTGCTTGTTCAGCTCGTGCTGTC	16	+	14396471-14396520	16qA1	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 1 (Abcc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	Abcc1b; Mrp1; Abcc1a; MRP; Mdrap	Abcc1b; Mrp1; Abcc1a; MRP; Mdrap
Mus musculus	RefSeq	ILMN_184665	ILMN_255887	POMT2	NM_153415.3	NM_153415.3		217734	118130103	NM_153415.3	Pomt2	NP_700464.2	ILMN_2755973	002260110	S	3022	TCTGCCCAGTCCCTTTGGAGTGTGTAGACCATGTAACTGTGGCAGCCAAG	12	-	88449803-88449852	12qD2	Mus musculus protein-O-mannosyltransferase 2 (Pomt2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 30] [evidence IEA]; Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein [goid 4169] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	A830009D15Rik; AW046274	A830009D15Rik; AW046274
Mus musculus	Riken	ILMN_205135	ILMN_205135	9430091F09RIK	ri|9430091F09|PX00110P05|AK035122|2636					AK035122	9430091F09Rik		ILMN_1245420	004670538	S	2560	CGAAGGGAGAGGCTGTAAGTGTGTTAACGTGGTTGCTGTGCCTGGGGTAG										
Mus musculus	RefSeq	ILMN_210662	ILMN_210662	KDELR2	NM_025841.3	NM_025841.3		66913	153792637	NM_025841.3	Kdelr2	NP_080117.1	ILMN_2607926	002230491	S	373	AAGGCCACCTATGATGGAAATCACGATACCTTCCGAGTGGAGTTCCTGGT				5qG2	Mus musculus KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 (Kdelr2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The retention in the endoplasmic reticulum (ER) lumen of soluble resident proteins. Sorting receptors retrieve proteins with ER localization signals, such as KDEL and HDEL sequences or some transmembrane domains, that have escaped to the cis-Golgi network and return them to the ER. Abnormally folded proteins and unassembled subunits are also selectively retained in the ER [goid 6621] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an endoplasmic reticulum (ER) retention sequence, a specific peptide sequence that ensures a protein is retained within the ER [goid 46923] [evidence IEA]	1110007A14Rik	1110007A14Rik
Mus musculus	RefSeq	ILMN_185225	ILMN_185225	TRIM8	NM_053100.1	NM_053100.1		93679	16716392	NM_053100.1	Trim8	NP_444330.1	ILMN_2782503	004060288	S	2350	GACCCTCTTTCTAGCCGGAAGTTCAAGGCCACATCTCAAGCAGCCTTTGG	19	+	46590705-46590754	19qC3	Mus musculus tripartite motif protein 8 (Trim8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA408830; BB006755; GERP; Rnf27	AA408830; BB006755; GERP; Rnf27
Mus musculus	RefSeq	ILMN_213763	ILMN_213763	CTS8	NM_019541.2	NM_019541.2		56094	46358367	NM_019541.2	Cts8	NP_062414.2	ILMN_2640538	005720600	S	1872	AATCACATTGTTTAGGTAGTTGATCAGGGGTTCACCCCTGGGAGTGCTCA	13	-	61348655-61348704	13qB2	Mus musculus cathepsin 8 (Cts8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]	Epcs70; CTS2; Epcs68	Epcs70; CTS2; Epcs68
Mus musculus	RefSeq	ILMN_213763	ILMN_213763	CTS8	NM_019541.2	NM_019541.2		56094	46358367	NM_019541.2	Cts8	NP_062414.2	ILMN_2824793	006660019	S	2408	GACACTTTCAGAAGTTTTAGTGTCTCAGAGGCAAGAGAGCTGAAACATGC	13	-	61348119-61348168	13qB2	Mus musculus cathepsin 8 (Cts8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]	Epcs70; CTS2; Epcs68	Epcs70; CTS2; Epcs68
Mus musculus	RefSeq	ILMN_218187	ILMN_218187	SNCA	NM_009221.2	NM_009221.2		20617	109638752	NM_009221.2	Snca	NP_033247.1	ILMN_3161601	005130202	S	751	AAGTCTTCCATCAGCAGTGATCGGCGTCCTGTACCTGCCCCTCAGCATCC	6	-	60765659-60765708	6qB3	Mus musculus synuclein, alpha (Snca), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; The chemical reactions and pathways involving neutral lipids, lipids only soluble in solvents of very low polarity [goid 6638] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IGI]; Any process that modulates the frequency, rate or extent of locomotion of a cell or organism [goid 40012] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50806] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IMP]; The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP, as it occurs in the mitochondrial inner membrane or chloroplast thylakoid membrane; as in, but not restricted to, the eukaryotes (Eukaryota, ncbi_taxonomy_id:2759) [goid 42775] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 34599] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA [goid 50812] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA [goid 50812] [evidence IDA]; The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 1774] [evidence IMP]; Any process that modulates the frequency or rate of macrophage activation [goid 43030] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IGI]; Any process that modulates the frequency, rate or extent of the regulated release of glutamate [goid 14048] [evidence IMP]; A process that modulates synaptic plasticity such that synapses are changed resulting in the increase in the rate, or frequency of synaptic transmission at the synapse [goid 60291] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IGI]; The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42416] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter [goid 1956] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IMP]	Interacting selectively with arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer [goid 50544] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	NACP; alphaSYN	NACP; alphaSYN
Mus musculus	RefSeq	ILMN_218187	ILMN_218187	SNCA	NM_009221.2	NM_009221.2		20617	109638752	NM_009221.2	Snca	NP_033247.1	ILMN_3059393	000730372	I	134	ATTGGAAGAAGAGTCTGTTCGCTGGAGCTCCACGCAGCCAGAAGTCGGAA	6	-	60779666-60779715	6qB3	Mus musculus synuclein, alpha (Snca), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; The chemical reactions and pathways involving neutral lipids, lipids only soluble in solvents of very low polarity [goid 6638] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IGI]; Any process that modulates the frequency, rate or extent of locomotion of a cell or organism [goid 40012] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50806] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IMP]; The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP, as it occurs in the mitochondrial inner membrane or chloroplast thylakoid membrane; as in, but not restricted to, the eukaryotes (Eukaryota, ncbi_taxonomy_id:2759) [goid 42775] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 34599] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA [goid 50812] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA [goid 50812] [evidence IDA]; The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 1774] [evidence IMP]; Any process that modulates the frequency or rate of macrophage activation [goid 43030] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IGI]; Any process that modulates the frequency, rate or extent of the regulated release of glutamate [goid 14048] [evidence IMP]; A process that modulates synaptic plasticity such that synapses are changed resulting in the increase in the rate, or frequency of synaptic transmission at the synapse [goid 60291] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IGI]; The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42416] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter [goid 1956] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IMP]	Interacting selectively with arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer [goid 50544] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	NACP; alphaSYN	NACP; alphaSYN
Mus musculus	RefSeq	ILMN_218187	ILMN_218187	SNCA	NM_009221.2	NM_009221.2		20617	109638752	NM_009221.2	Snca	NP_033247.1	ILMN_3136638	005130372	A	829	CCTGGTAGCAGGGTCTTGTGTGCTGTGGATATTGTTGTGGCTTCACACTT	6	-	60763318-60763347:60765611-60765630	6qB3	Mus musculus synuclein, alpha (Snca), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; The chemical reactions and pathways involving neutral lipids, lipids only soluble in solvents of very low polarity [goid 6638] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IGI]; Any process that modulates the frequency, rate or extent of locomotion of a cell or organism [goid 40012] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50806] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IMP]; The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP, as it occurs in the mitochondrial inner membrane or chloroplast thylakoid membrane; as in, but not restricted to, the eukaryotes (Eukaryota, ncbi_taxonomy_id:2759) [goid 42775] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 34599] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA [goid 50812] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA [goid 50812] [evidence IDA]; The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 1774] [evidence IMP]; Any process that modulates the frequency or rate of macrophage activation [goid 43030] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IGI]; Any process that modulates the frequency, rate or extent of the regulated release of glutamate [goid 14048] [evidence IMP]; A process that modulates synaptic plasticity such that synapses are changed resulting in the increase in the rate, or frequency of synaptic transmission at the synapse [goid 60291] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IGI]; The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42416] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter [goid 1956] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IMP]	Interacting selectively with arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer [goid 50544] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	NACP; alphaSYN	NACP; alphaSYN
Mus musculus	MEEBO	ILMN_189391	ILMN_189391	SCL0004176.1_1597	scl0004176.1_1597	AK047172.1			26091988	AK047172.1	scl0004176.1_1597		ILMN_2460850	006060338	S	20	CTCATTGTAACAAGCCGACTGTGGAAGGAATCTGGTGACTCCCAGGTGAG										
Mus musculus	MEEBO	ILMN_187209	ILMN_187209	9430067K09RIK	scl0320341.3_114						9430067K09Rik		ILMN_2442122	002100168	S	10	CACTGCCTTACAGCGTCAACCGGTGCCTGCGTGGGGTCATATACGTTGCT										
Mus musculus	RefSeq	ILMN_222964	ILMN_222964	SLFN3	NM_011409.1	NM_011409.1		20557	6755571	NM_011409.1	Slfn3	NP_035539.1	ILMN_2908122	004010368	S	1568	CACAAGCACAAAAATACGTTACCCCCAAAAATATTATCTGTCGGCCAAGG	11	+	83028408-83028457	11qC	Mus musculus schlafen 3 (Slfn3), mRNA.		Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]			
Mus musculus	RefSeq	ILMN_215368	ILMN_215368	ACSF3	NM_144932.3	NM_144932.3		257633	113199774	NM_144932.3	Acsf3	NP_659181.2	ILMN_2658654	000840240	S	1968	AGTGAGTTCCCTCAACCCCAGGCTGATTGTCCAAGCCCAGGTGACCCTGA	8	+	125341542-125341591	8qE1	Mus musculus acyl-CoA synthetase family member 3 (Acsf3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	BB101783; MGC37904	BB101783; MGC37904
Mus musculus	RefSeq	ILMN_234979	ILMN_234979	RPL7A	NM_013721.2	NM_013721.2		27176	31980763	NM_013721.2	Rpl7a	NP_038749.1	ILMN_2819841	004260017	S	1	GCTTTTCTCCAGCAGCCGAGCAAGATGCCCAAAGGGAAGAAGGCCAAGGG	2	+	26732816-26732836:26732837-26732839:26733015-26733040	2qA3	Mus musculus ribosomal protein L7a (Rpl7a), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A ribosome bound to mRNA that forms part of a polysome [goid 42788] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Surf-3; MGC103146; Surf3	Surf-3; MGC103146; Surf3
Mus musculus	RefSeq	ILMN_207372	ILMN_321515	LOC100040479	XM_001474763.1	XM_001474763.1		100040479	149271539	XM_001474763.1	LOC100040479	XP_001474813.1	ILMN_1229185	001070553	S	244	GCCAGGGAGTGCTTTACTGCCTCCTCACAGAAAATCTAGTTGACGGTGGA	X	-	49150983-49150994:49150995-49151003:49151672-49151700	XqA5	PREDICTED: Mus musculus hypothetical protein LOC100040479 (LOC100040479), mRNA.					
Mus musculus	RefSeq	ILMN_223309	ILMN_223309	GLT25D2	NM_177756.3	NM_177756.3		269132	46195810	NM_177756.3	Glt25d2	NP_808424.2	ILMN_2889899	004560072	S	3583	GCTGAGAAACCAGGCTTATCCAGCCCCAGCTTGTGTCTTCTCATCTAGAG	1	+	154357406-154357455	1qG3	Mus musculus glycosyltransferase 25 domain containing 2 (Glt25d2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria [goid 9103] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI427652; D730024P12	AI427652; D730024P12
Mus musculus	RefSeq	ILMN_223309	ILMN_223309	GLT25D2	NM_177756.3	NM_177756.3		269132	46195810	NM_177756.3	Glt25d2	NP_808424.2	ILMN_1257051	001510722	S	3524	GTGGTGCTTCACCTCAGCCACCCTTCCTTCCTGGGTATGATTCAGGCTTC	1	+	154357347-154357396	1qG3	Mus musculus glycosyltransferase 25 domain containing 2 (Glt25d2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria [goid 9103] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI427652; D730024P12	AI427652; D730024P12
Mus musculus	RefSeq	ILMN_199710	ILMN_199710	LOC382900	XM_356742.1	XM_356742.1			38076439	XM_356742.1	LOC382900		ILMN_1231281	007510373	S	2523	AAACAGCCAGATCTATAAGGTGACGTTCAGGCAGGAGGGGGCGGGAGAGG										
Mus musculus	RefSeq	ILMN_199345	ILMN_255613	LOC382202	XM_001006812.1	XM_001006812.1		382202	94411982	XM_001006812.1	LOC382202	XP_001006812.1	ILMN_1227617	000510356	S	355	ATAGTCCATAGAGAACTCCGTGGCCTGGGACGTGGTGTGTTCTTGCTGTG					PREDICTED: Mus musculus similar to Cytochrome P450 11B1, mitochondrial precursor (CYPXIB1) (P450C11) (Steroid 11-beta-hydroxylase) (P450(11 beta)-DS) (LOC382202), mRNA.					
Mus musculus	MEEBO	ILMN_223039	ILMN_223039	CAPN10	scl023830.13_151	NM_011796.1			6753259	NM_011796.1	Capn10		ILMN_2758502	003870241	S	2195	AGTGGGTGCTGCAGGGCGGGGCTAGAACTCCCAAGTGGTATCTTCATTCC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the directed movement of substances within cells [goid 32388] [evidence IMP]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46326] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214196	ILMN_233751	PAK2	NM_177326.2	NM_177326.2		224105	56118303	NM_177326.2	Pak2	NP_796300.1	ILMN_2645390	004280189	S	1510	GAGATGGTTGAAGGAGAGCCTCCATACCTCAACGAAAATCCTCTGCGGGC	16	-	32021995-32021997:32023175-32023221	16qB2	Mus musculus p21 (CDKN1A)-activated kinase 2 (Pak2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]	A130002K10Rik; KIAA4182; AI836325; D16Ertd269e; PAK-2; mKIAA4182	A130002K10Rik; KIAA4182; AI836325; D16Ertd269e; PAK-2; mKIAA4182
Mus musculus	RefSeq	ILMN_214196	ILMN_233751	PAK2	NM_177326.2	NM_177326.2		224105	56118303	NM_177326.2	Pak2	NP_796300.1	ILMN_1215465	005310059	S	2122	TTCAAGTTTTTCTGAGTATTTCATCTGCTGATCTTCTCTCCTTCGTGACC	16	-	32019876-32019925	16qB2	Mus musculus p21 (CDKN1A)-activated kinase 2 (Pak2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]	A130002K10Rik; KIAA4182; AI836325; D16Ertd269e; PAK-2; mKIAA4182	A130002K10Rik; KIAA4182; AI836325; D16Ertd269e; PAK-2; mKIAA4182
Mus musculus	RefSeq	ILMN_190097	ILMN_234254	CYP11A1	NM_019779.3	NM_019779.3		13070	148747565	NM_019779.3	Cyp11a1	NP_062753.3	ILMN_2634367	004250735	S	1586	GACAACACTGTGAACTGAAGGCTGGAGTCACATGGGGAGGTGGCCCATGG				9qB	Mus musculus cytochrome P450, family 11, subfamily a, polypeptide 1 (Cyp11a1), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: cholesterol + reduced adrenal ferredoxin + O2 = pregnenolone + 4-methylpentanal + oxidized adrenal ferredoxin + H2O [goid 8386] [evidence IDA]	Cyp11a; cscc; Cypxia1; D9Ertd411e; Scc; P450scc	Cyp11a; cscc; Cypxia1; D9Ertd411e; Scc; P450scc
Mus musculus	RefSeq	ILMN_197890	ILMN_197890	LOC195701	XM_112066.2	XM_112066.2			38079215	XM_112066.2	LOC195701		ILMN_2529720	005420370	S	734	TCATCTGCAATGACTGTGCCAGAAGCCGAAGGGCCTCACCCCCACATTTC										
Mus musculus	MEEBO	ILMN_193553	ILMN_193553	TRIAD3	scl0004138.1_92				45862338	AY572786	Triad3		ILMN_2498265	002970474	S	8	GCAGACTTTGAAGCAGATATCCACAACTATTTTTCCTTTTGTAACAACTC										
Mus musculus	RefSeq	ILMN_209410	ILMN_209410	CD6	NM_009852.3	NM_009852.3		12511	126513129	NM_009852.3	Cd6	NP_033982.3	ILMN_2769330	001440681	S	2868	CCCCACAGGTCCCCTTGGGTTGACAGGAACACTTTGGGAGAGTGTGGTTA	19	-	10863945-10863994	19qA	Mus musculus CD6 antigen (Cd6), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209410	ILMN_209410	CD6	NM_009852.3	NM_009852.3		12511	126513129	NM_009852.3	Cd6	NP_033982.3	ILMN_3117602	001030278	A	2929	ACCTTAAACAGGTCCTCCCCACAGCGTCAGAGAACTGGAGGGTCCCAGCC	19	-	10863884-10863933	19qA	Mus musculus CD6 antigen (Cd6), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209410	ILMN_209410	CD6	NM_009852.3	NM_009852.3		12511	126513129	NM_009852.3	Cd6	NP_033982.3	ILMN_3042812	000630132	I	1630	CAGTTCTGACTCCGACTATGAGCACTATGACTTCAGCTCCCAGCCACCTG	19	-	10867338-10867387	19qA	Mus musculus CD6 antigen (Cd6), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_212546	ILMN_212546	RNF219	NM_026047.4	NM_026047.4		72486	88759343	NM_026047.4	Rnf219	NP_080323.3	ILMN_2893063	001430576	S	3234	CAGGTGTGAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGA	14	-	104876923-104876972	14qE2.3	Mus musculus ring finger protein 219 (Rnf219), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI451544; 2810449K13Rik; MGC35679	AI451544; 2810449K13Rik; MGC35679
Mus musculus	RefSeq	ILMN_195335	ILMN_241223	ABCA3	NM_013855.2	NM_013855.2		27410	88759349	NM_013855.2	Abca3	NP_038883.2	ILMN_2514655	002650204	S	6364	GGACCACTACAGGGCTGAGTAGTGTCATCTCTTGAGGATACACTTAAACA	17	+	24547057-24547106	17qA3.3	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 3 (Abca3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; A membrane-bounded organelle, specialized for the storage and secretion various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae. Has some similar properties to, but is distinct from, a lysosome [goid 42599] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence ISO]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	ABC-C; 1810036E22Rik; MGC90532; Abc3	ABC-C; 1810036E22Rik; MGC90532; Abc3
Mus musculus	RefSeq	ILMN_195335	ILMN_241223	ABCA3	NM_013855.2	NM_013855.2		27410	88759349	NM_013855.2	Abca3	NP_038883.2	ILMN_1243488	004040497	S	5532	CCTGGAGAAAGCCAAGGAGAAGTATGGAGTGGATGATTACTCTGTGAGCC	17	+	24546225-24546274	17qA3.3	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 3 (Abca3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; A membrane-bounded organelle, specialized for the storage and secretion various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae. Has some similar properties to, but is distinct from, a lysosome [goid 42599] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence ISO]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	ABC-C; 1810036E22Rik; MGC90532; Abc3	ABC-C; 1810036E22Rik; MGC90532; Abc3
Mus musculus	RefSeq	ILMN_210958	ILMN_231538	1300002K09RIK	NM_028788.2	NM_028788.2		74152	142386611	NM_028788.2	1300002K09Rik	NP_083064.1	ILMN_1228127	003140221	S	3010	ACAACAGCCCTTTGACAATTTGTTTTGAGAAAATGAAGAGCCATCTCCCC	4	+	45899297-45899346	4qB1	Mus musculus RIKEN cDNA 1300002K09 gene (1300002K09Rik), mRNA.				MGC132877; MGC132878	MGC132877; MGC132878
Mus musculus	RefSeq	ILMN_221497	ILMN_221497	LBX1	NM_010691.4	NM_010691.4		16814	47087130	NM_010691.4	Lbx1	NP_034821.2	ILMN_2830970	000060093	S	612	GCAGATGGACATCGTGGCGCTGGCCGAACTCGAGCAGAACTCGGAGGCTT	19	-	45287241-45287290	19qC3	Mus musculus ladybird homeobox homolog 1 (Drosophila) (Lbx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of neuronal precursors to association neurons in the dorsal spinal cord [goid 21920] [evidence IMP]; The process whereby a cell becomes capable of differentiating autonomously into a neuron regardless of its environment; upon determination, the cell fate cannot be reversed [goid 48664] [evidence IMP]; The process whereby a cell becomes capable of differentiating autonomously into a neuron regardless of its environment; upon determination, the cell fate cannot be reversed [goid 48664] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Lbx1h	Lbx1h
Mus musculus	Riken	ILMN_203473	ILMN_203473	6430514E13RIK	ri|6430514E13|PX00045L07|AK078215|1103					AK078215	6430514E13Rik		ILMN_1220795	004640458	S	772	TGGGCCAGGAGACTTTCTGTTCATTACAGGAGGCAGACTACGAGGTGGCT										
Mus musculus	MEEBO	ILMN_191167	ILMN_191167	1200016E24RIK	scl00319202.1_96				51828727	XM_489305	1200016E24Rik		ILMN_2476733	003310215	S	6	TTGATAGGACATGACTCCTTAGTTACATAGATTCCTTTGGCAGAACTCCC										
Mus musculus	MEEBO	ILMN_188148	ILMN_188148	6430548M08RIK	scl33247.15_555				31982037	NM_172286	6430548M08Rik		ILMN_2599214	001190167	S	3392	ATGCAGGCCCATTAGCACACATTCAAACCTTCCGGGGCTGTGACCTTCAA										
Mus musculus	MEEBO	ILMN_188148	ILMN_188148	6430548M08RIK	scl33247.15_555				31982037	NM_172286	6430548M08Rik		ILMN_1219474	007160070	S	20	TTAAGGCTGAGAAAGGTGTGAGGTCGAAGATCTCAGGCAGCGCTGTTTCC										
Mus musculus	MEEBO	ILMN_188563	ILMN_188563	6720435I21RIK	scl077734.1_227						6720435I21Rik		ILMN_1252799	006940332	S	7	CAGAAAGTGCCCATTGTGAATGTCAAAGTATATTCCAAGTATTTTGTACC										
Mus musculus	Riken	ILMN_204604	ILMN_204604	UBE4A	ri|4732462D05|PX00051B21|AK028850|3355					AK028850	Ube4a		ILMN_1228665	003140017	S	3230	GGTGGGGAACTGGGCTCTTCAAAACAGTGAGTGTGTCTCACCTCTGAAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	Riken	ILMN_202306	ILMN_202306	6620401C13RIK	ri|6620401C13|PX00023P21|AK018346|2021					AK018346	6620401C13Rik		ILMN_2548577	006270356	S	1489	GCTTGGCACGGGCATGGAGGGGTTAAGTGGCCTTACGTAATGAGAGGACA										
Mus musculus	Riken	ILMN_202082	ILMN_202082	2700063P19RIK	ri|2700063P19|ZX00063F10|AK012483|774					AK012483	2700063P19Rik		ILMN_2546861	004010324	S	190	GCCTCTCTGTCGACGCTGAGGAGCAGCTTCGCAGGAAAATCCCAGAAACC										
Mus musculus	MEEBO	ILMN_220626	ILMN_220626	OTOG	scl32655.57.1_170	NM_013624.1			7305360	NM_013624.1	Otog		ILMN_2724583	002510598	S	9833	TGCAGATCCCCTCCTTTCTGCACTGCTTTGTGCTACTGGGTCTCAAAGGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The chemical reactions and pathways involving L-arabinose, the levorotatory isomer of arabino-pentose. L-arabinose occurs free, e.g. in the heartwood of many conifers, and in the combined state, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides etc [goid 46373] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Catalysis of the hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides [goid 46556] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IMP]		
Mus musculus	RefSeq	ILMN_214932	ILMN_214932	TNFAIP8L2	NM_027206.1	NM_027206.1		69769	21312409	NM_027206.1	Tnfaip8l2	NP_081482.1	ILMN_2878979	001300722	S	946	TCCTCCACAAACCCGAGGAAGGGGACACTAAAGGCCACACGCAGGAAGGT	3	-	95225051-95225100	3qF2.1	Mus musculus tumor necrosis factor, alpha-induced protein 8-like 2 (Tnfaip8l2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW610835; 1810019A08Rik	AW610835; 1810019A08Rik
Mus musculus	RefSeq	ILMN_195121	ILMN_317595	LOC627626	XM_001478233.1	XM_001478233.1		627626	149269350	XM_001478233.1	LOC627626	XP_001478283.1	ILMN_1227784	006330553	S	2460	CCTGACCTTCACACTGTTCAAATGCTTGCTGCTGACCGGGGGTTGCACGC				17qB3	PREDICTED: Mus musculus similar to CG11212-PA (LOC627626), mRNA.					
Mus musculus	RefSeq	ILMN_217268	ILMN_217268	GPHN	NM_172952.1	NM_172952.1		268566	27370465	NM_172952.1	Gphn	NP_766540.1	ILMN_2910990	006550475	S	2900	ACCCAGGGAAGGACTCACCCTAGCAGCCTCAGGCACAGTACTGGCAGGCA	12	+	79603297-79603346	12qC3	Mus musculus gephyrin (Gphn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The biological process by which a synapse between a motor neuron and a muscle is initially formed [goid 7529] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence TAS]	GPHRYN; GPH; geph; C230040D23; AI662856; BC027112; 5730552E08Rik; MGC150066; MGC38765	GPHRYN; GPH; geph; C230040D23; AI662856; BC027112; 5730552E08Rik; MGC150066; MGC38765
Mus musculus	RefSeq	ILMN_217268	ILMN_217268	GPHN	NM_172952.1	NM_172952.1		268566	27370465	NM_172952.1	Gphn	NP_766540.1	ILMN_2910995	004200482	S	2715	AGGCTGTCTGCTTCTTTATACTAGTGTAGGCAACACTTGGATTTCCCTTC	12	+	79603112-79603161	12qC3	Mus musculus gephyrin (Gphn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The biological process by which a synapse between a motor neuron and a muscle is initially formed [goid 7529] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence TAS]	GPHRYN; GPH; geph; C230040D23; AI662856; BC027112; 5730552E08Rik; MGC150066; MGC38765	GPHRYN; GPH; geph; C230040D23; AI662856; BC027112; 5730552E08Rik; MGC150066; MGC38765
Mus musculus	MEEBO	ILMN_194278	ILMN_194278	PAX6	scl20516.20_567				31980770	NM_013627	Pax6		ILMN_2504978	000150286	S	3	CTGTATTACTGTTCACAGTCCAATCATTTTGTGCATCTAGAATTCATTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The establishment, maintenance and elaboration of the dorsal/ventral axis [goid 9950] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The commitment of neuronal precursor cells to become specialized types of neurons in the forebrain [goid 21902] [evidence IMP]; The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain [goid 21798] [evidence IMP]; The process whose specific outcome is the progression of the pallium over time, from its formation to the mature structure. The pallium is the roof region of the telencephalon [goid 21543] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation [goid 30858] [evidence IMP]; The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain [goid 21797] [evidence IMP]; The process whose specific outcome is the creation of the forebrain-midbrain boundary [goid 21905] [evidence IMP]; A process by which a protein is transported to, or maintained in, a location within an organelle [goid 33365] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that modulates the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50767] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_202648	ILMN_218389	C330007P06RIK	XM_135837.6	XM_135837.6		77644	94407277	XM_135837.6	C330007P06Rik	XP_135837.3	ILMN_1237403	001770228	S	1102	AATCAGAAACCGTTCGCCGGCTGCCAAGACCTGCCCAACACACACATCCC	X	-	33255356-33255405	XqA3.3	PREDICTED: Mus musculus RIKEN cDNA C330007P06 gene, transcript variant 1 (C330007P06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187154	ILMN_256494	1110032E23RIK	NM_133187.2	NM_133187.2		68659	134032027	NM_133187.2	1110032E23Rik	NP_573450.2	ILMN_1235811	001660376	S	3393	GTCCTGAGAGAATTTGCCAGGCCATCACTTATCCTTCTTATACGGAACCT	3	+	79746992-79747041	3qE3	Mus musculus RIKEN cDNA 1110032E23 gene (1110032E23Rik), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AV011458	AV011458
Mus musculus	RefSeq	ILMN_201571	ILMN_201571	RPS12	NM_011295.2	NM_011295.2			40254576	NM_011295.2	Rps12		ILMN_2542938	007100598	S	658	GTGATGAGCCCATGTATGTCAAGCTGGTGGAGGCACTTTGTGCTGAGCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191967	ILMN_191967	2210408F11RIK	scl16095.1.480_168						2210408F11Rik		ILMN_2483811	002680402	S	20	AACCATTGGCTTGCACTATGACCTCCTTGAGTGATGTGCAACTTGGCTCC										
Mus musculus	MEEBO	ILMN_185412	ILMN_185412	D430033N04RIK	scl41936.23.1_18				31542477	NM_146039	D430033N04Rik		ILMN_2702606	004050661	S	3021	GGAACTGGGACATTCATCTACGGTGGGGCGATGGAAAATGAAGTTTAGGA										
Mus musculus	MEEBO	ILMN_223414	ILMN_223414	PTK9	scl0019230.1_1679	NM_008971.2			31560644	NM_008971.2	Ptk9		ILMN_2763748	003990682	S	1680	GAAGCTCGAAAGGTACCAGACAGTGCAGGCTTCCCATCCCATCCCCCGCC										
Mus musculus	RefSeq	ILMN_222697	ILMN_222697	2410081M15RIK	NM_028603.1	NM_028603.1		73680	21312079	NM_028603.1	2410081M15Rik	NP_082879.1	ILMN_2854117	000770722	S	1754	CCATAGGCAGAGCCCGGTGAATGGGTTTCTCCTACTGACTTAGAAGCAAC	4	-	128856361-128856410	4qD2.2	Mus musculus RIKEN cDNA 2410081M15 gene (2410081M15Rik), mRNA.				AI480941	AI480941
Mus musculus	RefSeq	ILMN_222697	ILMN_222697	2410081M15RIK	NM_028603.1	NM_028603.1		73680	21312079	NM_028603.1	2410081M15Rik	NP_082879.1	ILMN_2854121	002490437	S	2106	GTCCTGGGATTAAAGGCGTGTGCCACCACCTCATGGCACCATTTTCTTTA	4	-	128856009-128856058	4qD2.2	Mus musculus RIKEN cDNA 2410081M15 gene (2410081M15Rik), mRNA.				AI480941	AI480941
Mus musculus	RefSeq	ILMN_220338	ILMN_220338	2310051M13RIK	NM_027344.3	NM_027344.3		70202	142367151	NM_027344.3	2310051M13Rik	NP_081620.2	ILMN_1237270	000430364	S	1074	GTCGTGTGAGCTGCTGGACAACAAGGAGTAGACAGAGGATGGCATGGACC	13	-	60899819-60899860:60899861-60899868	13qB2	Mus musculus RIKEN cDNA 2310051M13 gene (2310051M13Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210235	ILMN_210235	OBRGRP	scl0230514.5_86				31341323	NM_175036	Obrgrp		ILMN_2603568	003170132	S	1535	CTCGCTAATGAGTGTCCAGAGCACTCTCCCTTGAGGCTTGCGGTCCAAGG										
Mus musculus	MEEBO	ILMN_195506	ILMN_195506	SLC8A3	scl42285.10_473				17978253	NM_080440	Slc8a3		ILMN_1232499	005420131	S	17	GCCAAAGAATCCAGGCTTCTAGAAAACAAGAACTGACACGCTGACACCCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + cation(out) = Ca2+(out) + cation(in) [goid 15368] [evidence IDA]		
Mus musculus	MEEBO	ILMN_195506	ILMN_195506	SLC8A3	scl42285.10_473				17978253	NM_080440	Slc8a3		ILMN_2683554	005420672	S	3332	CTCCTCTACATACTATTTGCCACGCTGGAGGCCTACTGCTACATCAAGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + cation(out) = Ca2+(out) + cation(in) [goid 15368] [evidence IDA]		
Mus musculus	RefSeq	ILMN_185783	ILMN_250021	LOC633016	XM_921371.2	XM_921371.2		633016	94381146	XM_921371.2	LOC633016	XP_926464.1	ILMN_1230808	000070047	S	286	CACAGATGCTGATAATACTTGGGAACCAGAAGAAAATTTAGATTGTCCAG					PREDICTED: Mus musculus similar to Chromobox homolog 3 (HP1 gamma homolog, Drosophila), transcript variant 2 (LOC633016), mRNA.					
Mus musculus	RefSeq	ILMN_185783	ILMN_250021	LOC633016	XM_921371.2	XM_921371.2		633016	94381146	XM_921371.2	LOC633016	XP_926464.1	ILMN_1242935	004060619	S	620	GCCTTCTACGAGGAGCGGCTGACTTGGCATTCTTGTCCTGAAGATGAAGC					PREDICTED: Mus musculus similar to Chromobox homolog 3 (HP1 gamma homolog, Drosophila), transcript variant 2 (LOC633016), mRNA.					
Mus musculus	MEEBO	ILMN_186786	ILMN_186786	4930403N07RIK	scl42359.5.1_59						4930403N07Rik		ILMN_2438479	005490661	S	2	CTTGGAAGAGAAAGCCGCCGCCACTATTTACATAAATGACACTTATACCA										
Mus musculus	Riken	ILMN_202417	ILMN_202417	2310035C23RIK	ri|2310035C23|ZX00039H04|AK009628|875					AK009628	2310035C23Rik		ILMN_2549458	006420291	S	821	TTTGCTTTTCCATTATTTTGTATCATTAATATATGCTAATAAAAAGAAGG								The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192115	ILMN_253546	KRBA1	NM_133922.2	NM_133922.2		77827	46048306	NM_133922.2	Krba1	NP_598683.2	ILMN_2727842	003840474	S	1992	GTCCTGGAGAAGTGCCCAGCAGGAGTCTGCATCAAGACAGTCCACAGACC	6	+	48362315-48362364	6qB2.3	Mus musculus KRAB-A domain containing 1 (Krba1), mRNA.				AI448780; A930040G15Rik	AI448780; A930040G15Rik
Mus musculus	RefSeq	ILMN_253546	ILMN_253546	KRBA1	NM_133922.2	NM_133922.2		77827	46048306	NM_133922.2	Krba1	NP_598683.2	ILMN_2876712	001820470	S	3792	CCAGCTGCAGAGGGCACCACAAGGGCACCTTAACCAGCTCCTGATCTCAA	6	+	48366721-48366770	6qB2.3	Mus musculus KRAB-A domain containing 1 (Krba1), mRNA.				AI448780; A930040G15Rik	AI448780; A930040G15Rik
Mus musculus	RefSeq	ILMN_192115	ILMN_253546	KRBA1	NM_133922.2	NM_133922.2		77827	46048306	NM_133922.2	Krba1	NP_598683.2	ILMN_2752234	006760025	S	3864	GTCTGTCTAGAGTGAATACTTCACAGATCTCATTTAGGGAGAGCCTGGTC	6	+	48366793-48366842	6qB2.3	Mus musculus KRAB-A domain containing 1 (Krba1), mRNA.				AI448780; A930040G15Rik	AI448780; A930040G15Rik
Mus musculus	RefSeq	ILMN_214527	ILMN_237158	MBNL2	NM_175341.4	NM_175341.4		105559	140971799	NM_175341.4	Mbnl2	NP_780550.1	ILMN_1254987	003450719	S	4243	CCAATATCCAAGACAGGAAGATCTCAGTTCAACAGCTCCGGTAGTTAGGG	14	+	120830610-120830659	14qE4	Mus musculus muscleblind-like 2 (Mbnl2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI849185; 1110002M11Rik; mKIAA4072; AI837313; MBLL; AL118326; AI047808; R75232; KIAA4072	AI849185; 1110002M11Rik; mKIAA4072; AI837313; MBLL; AL118326; AI047808; R75232; KIAA4072
Mus musculus	RefSeq	ILMN_204465	ILMN_242532	RLF	XM_900557.2	XM_900557.2		109263	94372262	XM_900557.2	Rlf	XP_905650.1	ILMN_1256245	004860202	S	2633	TCTCAAGCCAGCCTTTAATCTCAGGAGGCAGACAGGGGAATCTCTGTGAG	4	-	120710037-120710086	4qD2.2	PREDICTED: Mus musculus rearranged L-myc fusion sequence, transcript variant 3 (Rlf), mRNA.					
Mus musculus	RefSeq	ILMN_214502	ILMN_245430	BNIP1	NM_172149.4	NM_172149.4		224630	142382697	NM_172149.4	Bnip1	NP_742161.3	ILMN_2648648	000050681	S	432	GGGATCAGCAGGATGATGTCACAGCAGGTGCAACAGAGCGAGGAGGCTAT	17	+	26927929-26927978	17qA3.3	Mus musculus BCL2/adenovirus E1B interacting protein 1 (Bnip1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Sec20; MGC41600; 5930429G21Rik	Sec20; MGC41600; 5930429G21Rik
Mus musculus	Riken	ILMN_204955	ILMN_204955	D330034K12RIK	ri|D330034K12|PX00192N22|AK052345|2047					AK052345	D330034K12Rik		ILMN_1215040	001980612	S	1782	GCAATGCAGCCTGGACTGAAGATTTCTATCTCAGTGGGATTCCCTGGCTC										
Mus musculus	MEEBO	ILMN_191609	ILMN_191609	9627219_371	9627219_371						9627219_371		ILMN_2480596	003520373	S	18	TGTATTGTGATGTTGTGGAAGGGAGGTGGAATATGTCTGCTGCAGGGCAG										
Mus musculus	MEEBO	ILMN_194239	ILMN_194239	B230219J02RIK	scl7604.1.1_237						B230219J02Rik		ILMN_1223824	004780484	S	1	GGGGTTTCAAATCCCAGCTTTGGCCTGTCCTCTTTAAGATCGCTGCTTTC										
Mus musculus	RefSeq	ILMN_223212	ILMN_223212	TEX264	NM_011573.2	NM_011573.2		21767	126090849	NM_011573.2	Tex264	NP_035703.2	ILMN_3111593	000240594	A	1626	CGAAGGAGCCAGAGACTGTTATCTGCACCAGCCTCCTGGGCTGCCAACTT	9	-	106561141-106561190	9qF1	Mus musculus testis expressed gene 264 (Tex264), transcript variant 1, mRNA.				TEG-264	TEG-264
Mus musculus	RefSeq	ILMN_223212	ILMN_223212	TEX264	NM_011573.2	NM_011573.2		21767	126090849	NM_011573.2	Tex264	NP_035703.2	ILMN_1247681	000540678	S	920	GTGGTCATAGCTACCTTCCCTTACACCACCCCCATATCCATCTGGCTGGC	9	-	106575887-106575936	9qF1	Mus musculus testis expressed gene 264 (Tex264), transcript variant 1, mRNA.				TEG-264	TEG-264
Mus musculus	RefSeq	ILMN_212518	ILMN_212518	GALNT6	NM_172451.2	NM_172451.2		207839	142358967	NM_172451.2	Galnt6	NP_766039.1	ILMN_2627386	000780086	S	3561	CTGCCTGGAAGAAAATAGAAATGTCCAGGAAGGCTTTAGGGGACTTCAGC	15	-	100522429-100522478	15qF1	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (Galnt6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IDA]	AW047994; 4632410F13; GalNAc-T6	AW047994; 4632410F13; GalNAc-T6
Mus musculus	RefSeq	ILMN_197550	ILMN_197550	LOC242004	XM_143225.3	XM_143225.3			38076525	XM_143225.3	LOC242004		ILMN_1218336	001660326	S	789	TATGGCCAAGTTCCCCCACAGCCTCAAGTCCCCAGCCAGTGATGCCAGCT										
Mus musculus	RefSeq	ILMN_187993	ILMN_237700	TESP2	NM_009356.2	NM_009356.2		21756	112734837	NM_009356.2	Tesp2	NP_033382.2	ILMN_2771861	002760156	S	1043	CCGAGGGCGACAATAAAAACCAAGGTGCTGTTATCAAGCCGACGGTGTGC	1	-	34609384-34609433	1qB	Mus musculus testicular serine protease 2 (Tesp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_226611	ILMN_226611	FLG2	NM_001013804.1	NM_001013804.1		229574	84370014	NM_001013804.1	Flg2	NP_001013826.1	ILMN_2826699	004120463	S	6975	GAGGGAACAGAAGGACAGGAGCCTGGATATACCCAACCAGGGACCATCTG	3	+	93024602-93024651	3qF2.1	Mus musculus filaggrin family member 2 (Flg2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Flg2	Flg2
Mus musculus	RefSeq	ILMN_197590	ILMN_226611	FLG2	NM_001013804.1	NM_001013804.1		229574	84370014	NM_001013804.1	Flg2	NP_001013826.1	ILMN_2528661	004760170	S	1030	CAGGAACTAGTGGAGGACAAGGATATGGGTGTGTCTCAGAAGGTCAGTCC	3	+	93005535-93005584	3qF2.1	Mus musculus filaggrin family member 2 (Flg2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Flg2	Flg2
Mus musculus	RefSeq	ILMN_215680	ILMN_215680	IL13	NM_008355.1	NM_008355.1		16163	6680402	NM_008355.1	Il13	NP_032381.1	ILMN_2927131	005270719	S	1101	CACTCAAGGTGATGTGTAGTGAATGGGGGGAGGGTGGTGGGTTTGTCACT	11	-	53474801-53474850	11qB1.3	Mus musculus interleukin 13 (Il13), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-13 receptor [goid 5144] [evidence IEA];  [goid 5126] [evidence IEA]	Il-13	Il-13
Mus musculus	RefSeq	ILMN_235674	ILMN_235674	PDLIM5	NM_019809.1	NM_019809.1		56376	11602913	NM_019809.1	Pdlim5	NP_062783.1	ILMN_3137570	005860554	A	58	CGTTGAACCCTGGGAACCATGAGCAACTACAGTGTGTCATTGGTCGGCCC	3	-	142054740-142054772:142054773-142054789	3qH1	Mus musculus PDZ and LIM domain 5 (Pdlim5), transcript variant 2, mRNA.	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI987914; Enh2; 1110001A05Rik; Enh1; LIM; Enh3; Enh; C87059	AI987914; Enh2; 1110001A05Rik; Enh1; LIM; Enh3; Enh; C87059
Mus musculus	Riken	ILMN_203818	ILMN_203818	A230057E24RIK	ri|A230057E24|PX00128A08|AK038724|684					AK038724	A230057E24Rik		ILMN_1234357	007050279	S	522	CCATCGCGTCTTTGAAAGCCTCATTGTCTCCTTGTGAACTTGTTGGGACC										
Mus musculus	RefSeq	ILMN_215863	ILMN_215863	ZFP691	NM_183140.1	NM_183140.1		195522	34147152	NM_183140.1	Zfp691	NP_898963.1	ILMN_2813594	006660626	S	1982	TCAGTCCCCAGGCTTTGGGGGTAGTGCCTGAGACGGTGTCGTTGTCTACA	4	-	118667754-118667803	4qD2.1	Mus musculus zinc finger protein 691 (Zfp691), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	6430544H17Rik; MGC118413	6430544H17Rik; MGC118413
Mus musculus	Riken	ILMN_207177	ILMN_207177	F830031F15RIK	ri|F830031F15|PL00006F14|AK089837|2900					AK089837	F830031F15Rik		ILMN_2585630	001190070	S	2384	CTACAAATTCCCTTGTGATGTTGGATGCAAAGTAGCCCAAATAGAAGGGG										
Mus musculus	MEEBO	ILMN_188417	ILMN_188417	SRPK2	scl26825.18_82				47059479	NM_009274	Srpk2		ILMN_1251876	003870347	S	2133	ACCAGTGAGCTGGCTCCACCCTCAGACCTTTGTAGTGCTTTGAGGTACTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IDA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]		
Mus musculus	MEEBO	ILMN_188417	ILMN_188417	SRPK2	scl26825.18_82				47059479	NM_009274	Srpk2		ILMN_1218566	003400519	S	19	GTTGGAATGTTCACTTACAAAATAAAGATACCTACAGCTGGCTTAAGAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IDA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]		
Mus musculus	RefSeq	ILMN_242135	ILMN_242135	RNASET2	NM_029204.1	NM_029204.1		68195	86439978	NM_029204.1	Rnaset2	NP_083480.1	ILMN_3154111	002970086	A	267	TTTGACCCAGCACTGGCCCCCAACAGTATGCAAGGAGGTTAACAGCTGCC	17	+	6830793-6830826:6833797-6833812	17qA1	Mus musculus ribonuclease T2 (Rnaset2), transcript variant 2, mRNA.				C79750; RNASE6PL; MGC107248; 4833423A10Rik; 4930532K22Rik; 0610007O07Rik	C79750; RNASE6PL; MGC107248; 4833423A10Rik; 4930532K22Rik; 0610007O07Rik
Mus musculus	RefSeq	ILMN_220083	ILMN_233776	LOC664894	XM_973311.2	XM_973311.2		664894	149253161	XM_973311.2	LOC664894	XP_978405.1	ILMN_2717390	007330717	S	172	GGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGAC	4	-	131704625-131704674	4qD2.3	PREDICTED: Mus musculus similar to fusion protein: ubiquitin (bases 43_513); ribosomal protein S27a (bases 217_532) (LOC664894), mRNA.					
Mus musculus	RefSeq	ILMN_195068	ILMN_195068	TRPM4	NM_175130.3	NM_175130.3		68667	142364628	NM_175130.3	Trpm4	NP_780339.1	ILMN_2512297	005490367	S	3700	GAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAAT	7	-	52558541-52558590	7qB4	Mus musculus transient receptor potential cation channel, subfamily M, member 4 (Trpm4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence ISO]; Catalysis of the calcium concentration-regulatable energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5227] [evidence ISA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]	1110030C19Rik; AW047689; FLJ20041; TRPM4B; LTRPC4	1110030C19Rik; AW047689; FLJ20041; TRPM4B; LTRPC4
Mus musculus	RefSeq	ILMN_207558	ILMN_207558	TUBB2B	NM_023716.1	NM_023716.1		73710	21746160	NM_023716.1	Tubb2b	NP_076205.1	ILMN_2825574	007380706	S	1460	AGTTCCCCAGGCCAAGCAGGTTAGGGAAAGCTGAGATGAAAGGAGGGGGT	13	-	34134885-34134934	13qA3.3	Mus musculus tubulin, beta 2b (Tubb2b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2410129E14Rik	2410129E14Rik
Mus musculus	RefSeq	ILMN_207558	ILMN_207558	TUBB2B	NM_023716.1	NM_023716.1		73710	21746160	NM_023716.1	Tubb2b	NP_076205.1	ILMN_2598715	002070008	S	29	TAAGTTCCAGGTGGCCCAGCAGTGGGTGTGGAAGGGGAGGATCATCAGAC	13	-	34137741-34137790	13qA3.3	Mus musculus tubulin, beta 2b (Tubb2b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2410129E14Rik	2410129E14Rik
Mus musculus	RefSeq	2410129E14Rik	ILMN_207558	TUBB2B	NM_023716.1	NM_023716.1		73710	21746160	NM_023716.1	Tubb2b	NP_076205.1	ILMN_2588051	001010296	S	1176	GCCGTGTGTGACATCCCTCCTCGTGGCCTCAAGATGTCAGCCACCTTCAT	13	-	34135169-34135218	13qA3.3	Mus musculus tubulin, beta 2b (Tubb2b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2410129E14Rik	2410129E14Rik
Mus musculus	Riken	ILMN_206357	ILMN_206357	D430022H17RIK	ri|D430022H17|PX00194G21|AK084998|1077					AK084998	D430022H17Rik		ILMN_2579504	005890270	S	1027	TTCCTTTGCTCACTCTGCTTTGGATCCGTTCACTCTAATAAATCAGTAGC										
Mus musculus	RefSeq	ILMN_217656	ILMN_217656	PRL	NM_011164.1	NM_011164.1		19109	6755163	NM_011164.1	Prl	NP_035294.1	ILMN_2685995	002060577	S	672	CCACAAGGTTGACAATTTTCTCAAGGTCCTGAGGTGCCAAATTGCCCATC	13	+	27156856-27156905	13qA3.1	Mus musculus prolactin (Prl), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]	The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]; The secretion of milk by the mammary gland [goid 7595] [evidence IEA]; The transport of dimerized STAT (Signal Transducers and Activators of Transcription) proteins into the nucleus following activation by members of the janus activated kinase (JAK) family of tyrosine kinases [goid 7262] [evidence IDA]; Any process that modulates the frequency, rate or extent of the JAK-STAT signaling pathway [goid 46425] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the JAK-STAT signaling pathway activity [goid 46427] [evidence IGI]	Interacting selectively with the prolactin receptor [goid 5148] [evidence ISO]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence TAS]	AV290867; Prl1a1	AV290867; Prl1a1
Mus musculus	RefSeq	ILMN_188619	ILMN_242042	VTI1A	NM_016862.3	NM_016862.3		53611	141803384	NM_016862.3	Vti1a	NP_058558.1	ILMN_2480180	004640059	S	3176	GTTCTTATTATGCAGACCTCGGTTGTTGAGCATTTGTGAAGCTGGGAGCC	19	+	55700822-55700871	19qD2	Mus musculus vesicle transport through interaction with t-SNAREs homolog 1A (yeast) (Vti1a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]		1110014F16Rik; MVti1a; Vti1; MVti1; 1110018K19Rik; MGC102006; 4921537J05Rik; Vti1-rp2	1110014F16Rik; MVti1a; Vti1; MVti1; 1110018K19Rik; MGC102006; 4921537J05Rik; Vti1-rp2
Mus musculus	RefSeq	ILMN_188619	ILMN_242042	VTI1A	NM_016862.3	NM_016862.3		53611	141803384	NM_016862.3	Vti1a	NP_058558.1	ILMN_2484918	004050609	S	695	GGGATCATCGTGGTCATCGCCATCCTGACGGCCATCGCGTTTTTCGTCAA	19	+	55698341-55698390	19qD2	Mus musculus vesicle transport through interaction with t-SNAREs homolog 1A (yeast) (Vti1a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]		1110014F16Rik; MVti1a; Vti1; MVti1; 1110018K19Rik; MGC102006; 4921537J05Rik; Vti1-rp2	1110014F16Rik; MVti1a; Vti1; MVti1; 1110018K19Rik; MGC102006; 4921537J05Rik; Vti1-rp2
Mus musculus	RefSeq	ILMN_199220	ILMN_261542	EG217246	XM_907217.1	XM_907217.1		217246	82936833	XM_907217.1	EG217246	XP_912310.1	ILMN_1243927	003930519	S	1986	TTTCATGTTGGTCCTCATCCTGGCACTGGGCTTCAGGCTGCACTACTTGG				11qE1	PREDICTED: Mus musculus predicted gene, EG217246 (EG217246), mRNA.					
Mus musculus	RefSeq	ILMN_211153	ILMN_253937	1700081D17RIK	NM_028560.3	NM_028560.3		73523	148230379	NM_028560.3	1700081D17Rik	NP_082836.2	ILMN_2613101	004280593	S	883	GAGCAATTCAATCAAAAATAACCGTCTACTGAGCGGAAACTTCTACCTTC				14qD2	Mus musculus RIKEN cDNA 1700081D17 gene (1700081D17Rik), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]			AI429082; 1700051A02Rik	AI429082; 1700051A02Rik
Mus musculus	RefSeq	ILMN_189502	ILMN_238436	SLTM	NM_025690.3	NM_025690.3		66660	118130289	NM_025690.3	Sltm	NP_079966.2	ILMN_1252121	001780402	S	3566	GTTCCCTGCATTTCGGAGTATTATGTAACCTATTTTTGCAGAAGGTACTG	9	+	70439914-70439963	9qD	Mus musculus SAFB-like, transcription modulator (Sltm), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	5730455C01Rik; 5730555F13Rik; Met; 9130215G10Rik	5730455C01Rik; 5730555F13Rik; Met; 9130215G10Rik
Mus musculus	RefSeq	ILMN_189502	ILMN_238436	SLTM	NM_025690.3	NM_025690.3		66660	118130289	NM_025690.3	Sltm	NP_079966.2	ILMN_1224792	004670343	S	1970	GCGTCGAGAGCGTGAACGCATTAGAATAATTCGTGAACGGGAAGAACGGG	9	+	70431763-70431812	9qD	Mus musculus SAFB-like, transcription modulator (Sltm), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	5730455C01Rik; 5730555F13Rik; Met; 9130215G10Rik	5730455C01Rik; 5730555F13Rik; Met; 9130215G10Rik
Mus musculus	RefSeq	ILMN_219005	ILMN_219005	TEX10	NM_172304.3	NM_172304.3		269536	141801807	NM_172304.3	Tex10	NP_758508.2	ILMN_1238398	002060523	S	2708	GCACAGCTGGCTGTATATTTGGAGTGATGTGTAAGCTCCTGGATCATACA	4	-	48447880-48447929	4qB1	Mus musculus testis expressed gene 10 (Tex10), mRNA.				2810462N03Rik; MGC11792; BC006867; 2610206N19Rik	2810462N03Rik; MGC11792; BC006867; 2610206N19Rik
Mus musculus	RefSeq	ILMN_219005	ILMN_219005	TEX10	NM_172304.3	NM_172304.3		269536	141801807	NM_172304.3	Tex10	NP_758508.2	ILMN_2702989	005560092	S	3012	GCCTCTTAGGTCGCACATGCTGACTAATGCCATCCTAGTGCAGCAGATCA	4	-	48445993-48446042	4qB1	Mus musculus testis expressed gene 10 (Tex10), mRNA.				2810462N03Rik; MGC11792; BC006867; 2610206N19Rik	2810462N03Rik; MGC11792; BC006867; 2610206N19Rik
Mus musculus	RefSeq	ILMN_200667	ILMN_200667	LOC381805	XM_355805.1	XM_355805.1			38085020	XM_355805.1	LOC381805		ILMN_1225886	002060369	S	638	GCGCAGCTCATACCCTCCTTCAACTCCAGCTCCAGGGAATCCAGTGTCAT										
Mus musculus	RefSeq	ILMN_222262	ILMN_222262	RAB3C	NM_023852.4	NM_023852.4		67295	141803167	NM_023852.4	Rab3c	NP_076341.1	ILMN_2747054	004810112	S	1158	CACGGATTCATATCATGCTTTTCATTTGTATGGATGATAACCTAGAGTCC	13	-	110851631-110851680	13qD2.2	Mus musculus RAB3C, member RAS oncogene family (Rab3c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	3110015B08Rik; AI850886; MGC124069; 3110037E15Rik; 2700062I01Rik	3110015B08Rik; AI850886; MGC124069; 3110037E15Rik; 2700062I01Rik
Mus musculus	RefSeq	ILMN_210420	ILMN_210420	2610029G23RIK	NM_026312.2	NM_026312.2		67683	31541907	NM_026312.2	2610029G23Rik	NP_080588.1	ILMN_1257485	001580097	S	386	ACTACGGGACTTTACTGCGACTGGATTGTTCCCAGGGCTACACTGAAGAG	X	+	101285462-101285511	XqD	Mus musculus RIKEN cDNA 2610029G23 gene (2610029G23Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_210420	ILMN_210420	2610029G23RIK	NM_026312.2	NM_026312.2		67683	31541907	NM_026312.2	2610029G23Rik	NP_080588.1	ILMN_2834344	000240327	S	2127	GCTTTGAAAGAGTTGGAGAGTCCCTTGTATTTCATACTAGCCAGGCTGTT	X	+	101287413-101287462	XqD	Mus musculus RIKEN cDNA 2610029G23 gene (2610029G23Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_219040	ILMN_245644	TMEM126B	NM_026734.1	NM_026734.1		68472	58037122	NM_026734.1	Tmem126b	NP_081010.1	ILMN_1259294	004540619	S	684	CCACGTGCAAGGCTTGTGCCTGATGATTAACCAAAGACTCCATGGACTCC	7	-	97617467-97617487:97617488-97617516	7qE1	Mus musculus transmembrane protein 126B (Tmem126b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110001A23Rik	1110001A23Rik
Mus musculus	RefSeq	ILMN_213850	ILMN_213850	MTX2	NM_016804.2	NM_016804.2		53375	31543273	NM_016804.2	Mtx2	NP_058084.2	ILMN_2641449	006400204	S	2709	GCTCTGGTTGCCTGGGGCCACGGTTCTGGTTCTTATCGGGTTAAATGCAG	2	+	74679077-74679126	2qC3	Mus musculus metaxin 2 (Mtx2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1500012G02Rik	1500012G02Rik
Mus musculus	RefSeq	ILMN_186023	ILMN_253254	E430028B21RIK	NM_178668.3	NM_178668.3		211948	40538841	NM_178668.3	E430028B21Rik	NP_848783.3	ILMN_1237621	007570403	S	3169	CACCATGTCTGCTTGGTGATGCTTTAGCGGTTGCTTTGTCATGTCCAGGT	14	-	27483913-27483962	14qA3	Mus musculus RIKEN cDNA E430028B21 gene (E430028B21Rik), mRNA.				2'-PDE	2'-PDE
Mus musculus	RefSeq	ILMN_210355	ILMN_210355	TERF2IP	NM_020584.1	NM_020584.1		57321	15618998	NM_020584.1	Terf2ip	NP_065609.1	ILMN_1235615	004210411	S	2123	CTCTGGTGACTAAGATGGGAATTGAGAGGGGTTATATGGTACGATTTGTT	8	+	114544062-114544111	8qE1	Mus musculus telomeric repeat binding factor 2, interacting protein (Terf2ip), mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210355	ILMN_210355	TERF2IP	NM_020584.1	NM_020584.1		57321	15618998	NM_020584.1	Terf2ip	NP_065609.1	ILMN_2986458	000510433	S	2220	ACTGTCTTAAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGTCTGC	8	+	114544159-114544208	8qE1	Mus musculus telomeric repeat binding factor 2, interacting protein (Terf2ip), mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210355	ILMN_210355	TERF2IP	NM_020584.1	NM_020584.1		57321	15618998	NM_020584.1	Terf2ip	NP_065609.1	ILMN_2604776	002260612	S	769	CTGAGGAGGAGTGTGTGAAAGGAGAGATCAAGGAGAATGGAGAGGCAGAC	8	+	114539267-114539316	8qE1	Mus musculus telomeric repeat binding factor 2, interacting protein (Terf2ip), mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210355	ILMN_210355	TERF2IP	NM_020584.1	NM_020584.1		57321	15618998	NM_020584.1	Terf2ip	NP_065609.1	ILMN_2610435	000610332	S	1064	GAAAATTATGCTAGACTTAAAATTGAGTGGCCTTGGTCCACTTTGCTGTG	8	+	114543003-114543052	8qE1	Mus musculus telomeric repeat binding factor 2, interacting protein (Terf2ip), mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219671	ILMN_219671	SCAND1	NM_020255.2	NM_020255.2		19018	142384255	NM_020255.2	Scand1	NP_064651.1	ILMN_1223960	001050044	S	283	AGACCTTTCGCCAGCGCTTCCGGCAGTTTCGCTACCAGGACGCGGCCGGG	2	-	156137831-156137880	2qH1	Mus musculus SCAN domain-containing 1 (Scand1), mRNA.			The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IPI]	2310003H23Rik; Ppargc2; PGC-2; Leap1	2310003H23Rik; Ppargc2; PGC-2; Leap1
Mus musculus	RefSeq	ILMN_223778	ILMN_223778	HARS	NM_008214.3	NM_008214.3		15115	142388902	NM_008214.3	Hars	NP_032240.2	ILMN_2769030	002690762	S	1561	CCAGTAGAGGAAACAGGATTGATCTTAACTGAACGAAAACAAAACTGCAT	18	-	36926475-36926524	18qB2	Mus musculus histidyl-tRNA synthetase (Hars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6427] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His) [goid 4821] [evidence IEA]	MMHRS	MMHRS
Mus musculus	RefSeq	ILMN_218481	ILMN_239582	CYS1	NM_001004455.2	NM_001004455.2		12879	111074544	NM_001004455.2	Cys1	NP_001004455.2	ILMN_1229578	006960168	S	1093	AGTTGCTGGCCGAGTCGGAGGCCTGGGGGCCCCAGGAGCTGACCCCACGA	12	-	25365518-25365567	12qA1.3	Mus musculus cystin 1 (Cys1), transcript variant 2, mRNA.	A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia in eukaryotic cells and is responsible for their movements [goid 35085] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2900006B19Rik; ck; Ccap; cpk; AV218859	2900006B19Rik; ck; Ccap; cpk; AV218859
Mus musculus	RefSeq	ILMN_244468	ILMN_244468	0610007C21RIK	NM_027855.2	NM_027855.2		381629	47087145	NM_027855.2	0610007C21Rik	NP_082131.2	ILMN_3033922	001690678	I	139	GCTTACTGTGAGGATACATCGAAGCTAATGCAGGCCCGATGCTGCCTGAA	5	+	31351883-31351932	5qB1	Mus musculus RIKEN cDNA 0610007C21 gene (0610007C21Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AI316792; HSPC013; Apr3; p18	AI316792; HSPC013; Apr3; p18
Mus musculus	RefSeq	ILMN_213861	ILMN_213861	4931414P19RIK	NM_028890.2	NM_028890.2		74359	118130539	NM_028890.2	4931414P19Rik	NP_083166.1	ILMN_1251698	002030195	S	1911	CCTGACTTGAACTCGTTTATTGAAATCAAGGTGGAAAAGGATGAATACAC	14	-	55203124-55203173	14qC3	Mus musculus RIKEN cDNA 4931414P19 gene (4931414P19Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_217785	ILMN_217785	CXCR7	NM_007722.3	NM_007722.3		12778	142357310	NM_007722.3	Cxcr7	NP_031748.2	ILMN_2687561	000840026	S	2387	CCATCCTGCTGAGGGCATGAGGTTAGGTGTCAGCGAGCTGTGTATGCTGT	1	+	92112671-92112720	1qD	Mus musculus chemokine (C-X-C motif) receptor 7 (Cxcr7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AW541270; Rdc1; Cmkor1	AW541270; Rdc1; Cmkor1
Mus musculus	MEEBO	ILMN_224016	ILMN_224016	2610009E16RIK	scl069202.1_161				51712652	XM_355811	2610009E16Rik		ILMN_2773244	003850097	S	1591	CCTTGTCCTTTGACCCAGCCTCTCATTTACATCTCTCCAGACACTGCTCC										
Mus musculus	RefSeq	ILMN_215585	ILMN_215585	PMP22	NM_008885.2	NM_008885.2		18858	118130612	NM_008885.2	Pmp22	NP_032911.1	ILMN_2661299	002480129	S	78	CAGTGGACGCACCGGAGTTTGTGCCTGAGGCTAATCTGCTCTGAGATAGC	11	+	62945089-62945138	11qB3	Mus musculus peripheral myelin protein 22 (Pmp22), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the wraps of cell membrane that constitute myelin are laid down around an axon in the central or peripheral nervous system [goid 32288] [evidence IMP]		22kDa; Tr; HNPP; Gas-3; trembler	22kDa; Tr; HNPP; Gas-3; trembler
Mus musculus	RefSeq	ILMN_215585	ILMN_215585	PMP22	NM_008885.2	NM_008885.2		18858	118130612	NM_008885.2	Pmp22	NP_032911.1	ILMN_1228535	004730685	S	1448	GGAGACCCGATACAAACGGTTCATAACTGCTTTCATACCTAGCTAGGCTG	11	+	62972695-62972744	11qB3	Mus musculus peripheral myelin protein 22 (Pmp22), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the wraps of cell membrane that constitute myelin are laid down around an axon in the central or peripheral nervous system [goid 32288] [evidence IMP]		22kDa; Tr; HNPP; Gas-3; trembler	22kDa; Tr; HNPP; Gas-3; trembler
Mus musculus	RefSeq	ILMN_213437	ILMN_213437	RAD23A	NM_009010.4	NM_009010.4		19358	145966817	NM_009010.4	Rad23a	NP_033036.2	ILMN_1216295	001500129	S	952	CATCTCTGATGTAGAGGGGGAGGTTGGTGCCATAGGTGAGGAGGCCCCAC				8qC3	Mus musculus RAD23a homolog (S. cerevisiae) (Rad23a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IGI]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]	2310040P19Rik; mHR23A; AL024030	2310040P19Rik; mHR23A; AL024030
Mus musculus	RefSeq	ILMN_213437	ILMN_213437	RAD23A	NM_009010.4	NM_009010.4		19358	145966817	NM_009010.4	Rad23a	NP_033036.2	ILMN_2662743	006370037	S	681	TTCCAGGAAGCCCTGAGCCTGAACATGGTTCTGTCCAGGAAAGCCAGGCG				8qC3	Mus musculus RAD23a homolog (S. cerevisiae) (Rad23a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IGI]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]	2310040P19Rik; mHR23A; AL024030	2310040P19Rik; mHR23A; AL024030
Mus musculus	MEEBO	ILMN_188627	ILMN_188627	MJ-3000-104_809	MJ-3000-104_809						MJ-3000-104_809		ILMN_2454295	000110746	S	2	TGGGGCAAGTGGTAGGTTCTTTGAGATTACTGCAAGGAGATTGGGGGTTT										
Mus musculus	Riken	ILMN_203517	ILMN_203517	4930560C15RIK	ri|4930560C15|PX00035P03|AK029788|5517					AK029788	4930560C15Rik		ILMN_1234852	006350731	S	1188	TCGCGGCTCTACACGCACATGTCTTCGGGATCGTGTGGAAGTCGGAGGAT										
Mus musculus	RefSeq	ILMN_236876	ILMN_236876	OLFR663	NM_001011757.1	NM_001011757.1		257914	58801301	NM_001011757.1	Olfr663	NP_001011757.1	ILMN_3160944	002100600	S	597	GATCGACAGCATTAACCAGCTCTTCCTGGCATGGGCAGTCATGGGTAGTG	7	+	111852679-111852728	7qE3	Mus musculus olfactory receptor 663 (Olfr663), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR40-12	MOR40-12
Mus musculus	RefSeq	ILMN_222817	ILMN_245989	OLFR684	NM_207249.1	NM_207249.1		244187	46402250	NM_207249.1	Olfr684	NP_997132.1	ILMN_2755261	000730035	S	611	CAGGTTGGACCCTGCTGGGTTCTGATCTCATTCTCATTGTACTCTCCTAC	7	-	112305534-112305583	7qE3	Mus musculus olfactory receptor 684 (Olfr684), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR40-8P; GA_x6K02T2PBJ9-7786441-7785503	MOR40-8P; GA_x6K02T2PBJ9-7786441-7785503
Mus musculus	RefSeq	ILMN_256331	ILMN_256331	2310044H10RIK	NM_197991.1	NM_197991.1		69683	37574073	NM_197991.1	2310044H10Rik	NP_932108.1	ILMN_2783457	006270326	S	1362	CAGCCTGGATCTGTCACCAGGAGAGGATTGTGGGCCTCCACGTTAGTCTG	7	-	51745646-51745695	7qB4	Mus musculus RIKEN cDNA 2310044H10 gene (2310044H10Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5430410O10Rik	5430410O10Rik
Mus musculus	Riken	ILMN_205237	ILMN_205237	E230008D17RIK	ri|E230008D17|PX00209N15|AK053968|1947					AK053968	E230008D17Rik		ILMN_2571036	004070041	S	1205	TCGGGTGGACTGTTCCAGATTCTTAGGTCCTTCGGTGGGTTCTCCACACC										
Mus musculus	RefSeq	ILMN_214642	ILMN_214642	MAN2A2	NM_172903.3	NM_172903.3		140481	146198662	NM_172903.3	Man2a2	NP_766491.1	ILMN_2650255	006040114	S	3520	GCCATCAGCAATCGCTACATGCAGGTCTGGTTCTCCGGCCTTACTGGGCT				7qD3	Mus musculus mannosidase 2, alpha 2 (Man2a2), mRNA.			Catalysis of the hydrolysis of any N-glycosyl bond [goid 16799] [evidence IDA]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [evidence IDA]	1700052O22Rik; 4931438M07Rik; MX; AI480988	1700052O22Rik; 4931438M07Rik; MX; AI480988
Mus musculus	RefSeq	ILMN_214642	ILMN_214642	MAN2A2	NM_172903.3	NM_172903.3		140481	146198662	NM_172903.3	Man2a2	NP_766491.1	ILMN_1226901	002760338	S	3699	TGGGTGTGAACATTAGCAGTTGCCAAGTGTTAGTCACCTTCTACTGTGTC				7qD3	Mus musculus mannosidase 2, alpha 2 (Man2a2), mRNA.			Catalysis of the hydrolysis of any N-glycosyl bond [goid 16799] [evidence IDA]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [evidence IDA]	1700052O22Rik; 4931438M07Rik; MX; AI480988	1700052O22Rik; 4931438M07Rik; MX; AI480988
Mus musculus	RefSeq	ILMN_221847	ILMN_221847	OLFR727	NM_146319.1	NM_146319.1		258316	22129658	NM_146319.1	Olfr727	NP_666431.1	ILMN_2741180	006250382	S	602	CAGATAGTGGATTTCTATCCATGAGTTCATTTCTCCTCTTGGTTGTCTCC	14	+	50746855-50746904	14qC1	Mus musculus olfactory receptor 727 (Olfr727), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR246-2	MOR246-2
Mus musculus	RefSeq	ILMN_202793	ILMN_257096	EG625424	NM_001039228.2	NM_001039228.2		625424	141802475	NM_001039228.2	EG625424	NP_001034317.1	ILMN_2552338	001010593	S	2004	TGGTGTAGAGTGTGGCCCCGTGTTTGGGCCGTGTGCTCCTGTGTGACAAA	5	-	112783000-112783049	5qF	Mus musculus predicted gene, EG625424 (EG625424), mRNA.					
Mus musculus	RefSeq	ILMN_198526	ILMN_227229	EG243872	XM_620604.4	XM_620604.4		243872	149256570	XM_620604.4	EG243872	XP_620604.2	ILMN_1220205	002070021	S	37	GCTCTGGCCCCTGCTGTTGTTAAGAACCAGGAGGCCAAAAAGGTAGTCAG	7	+	20539168-20539217	7qA3	PREDICTED: Mus musculus predicted gene, EG243872 (EG243872), mRNA.					
Mus musculus	MEEBO	ILMN_223067	ILMN_223067	2410019G02RIK	scl067875.2_40	XM_126427.5			38091497	XM_126427.5	2410019G02Rik		ILMN_2758896	007210095	S	1041	TTGCACGCGACTGCACCGGAATTTCCGCAGGAGCGAGAGTATCTATTGGG										
Mus musculus	RefSeq	ILMN_208628	ILMN_208628	TMEM116	NM_029912.1	NM_029912.1		77462	22296590	NM_029912.1	Tmem116	NP_084188.1	ILMN_2624031	000070730	S	667	TGAGCAGTGGGCAGTGATTCACACTGTGGGCCAGCGAGTGCGTTTCTTCC	5	+	121943720-121943769	5qF	Mus musculus transmembrane protein 116 (Tmem116), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			4930513P12Rik; C030022K24Rik; 4930406A18Rik	4930513P12Rik; C030022K24Rik; 4930406A18Rik
Mus musculus	RefSeq	ILMN_208628	ILMN_208628	TMEM116	NM_029912.1	NM_029912.1		77462	22296590	NM_029912.1	Tmem116	NP_084188.1	ILMN_2964585	002350661	S	838	CCAGGGGCTGCTCAACTGTGGCATTTATGGCTGGACACAGTGCAAGTTCC	5	+	121945029-121945078	5qF	Mus musculus transmembrane protein 116 (Tmem116), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			4930513P12Rik; C030022K24Rik; 4930406A18Rik	4930513P12Rik; C030022K24Rik; 4930406A18Rik
Mus musculus	Riken	ILMN_201707	ILMN_201707	NPHP1	ri|2310009I01|ZX00038P12|AK009252|629					AK009252	Nphp1		ILMN_1229775	002810546	S	63	CCCTGTTCTCTCCTAGAACCACTTGGAATGAATGGCGCTCTCTGTTGCCC						A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_190357	ILMN_190357	4933404K08RIK	scl12335.4.1_245						4933404K08Rik		ILMN_2469448	000110242	S	2	AGGGTGGGGGGTCATGATAATTTCTTGATAGTACAGAGGATAGCAGTCTC										
Mus musculus	MEEBO	ILMN_190519	ILMN_190519	3830422N12RIK	scl54883.6.1_40				29135262	NM_174993	3830422N12Rik		ILMN_1229494	001940309	S	20	CCAAATCTAATTAAATTTTGAAAGGCAACTTTTATTGTAGTTTCAAATCA										
Mus musculus	RefSeq	ILMN_184808	ILMN_314916	LOC100048060	XR_034197.1	XR_034197.1		100048060	149274389	XR_034197.1	LOC100048060		ILMN_1240368	006550438	S	885	GGGAATCCAACACCCTCTCATTATTAAAGCTATATATAGAGAGAGAACTC					PREDICTED: Mus musculus similar to tripartite motif protein TRIM12 (LOC100048060), misc RNA.					
Mus musculus	MEEBO	ILMN_187443	ILMN_187443	SCL0003271.1_496	scl0003271.1_496	AK088996.1			26105028	AK088996.1	scl0003271.1_496		ILMN_1259890	000770279	S	3	CCCACCGCACTGCCCATTTTATGATACGTTGGATCATCTTCTTCGAAACC										
Mus musculus	RefSeq	ILMN_213223	ILMN_247788	STX1B	NM_024414.2	NM_024414.2		56216	134032003	NM_024414.2	Stx1b	NP_077725.1	ILMN_2634877	001710600	S	718	CTACCAATGAAGAACTAGAAGACATGTTGGAAAGCGGGAAGCTGGCCATC	7	-	134954180-134954229	7qF3	Mus musculus syntaxin 1B (Stx1b), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]			Stx1b; SYN1B	Stx1b; SYN1B
Mus musculus	RefSeq	ILMN_221212	ILMN_221212	DCTN5	NM_021608.2	NM_021608.2		59288	31981210	NM_021608.2	Dctn5	NP_067621.2	ILMN_2732536	002100356	S	1164	CACAGTCCACACAGATGACAGGCCACTTTCCTGCTGCTAAGATGGGACCA	7	+	129292221-129292270	7qF3	Mus musculus dynactin 5 (Dctn5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [evidence ISS]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	4930427E12Rik; C78178	4930427E12Rik; C78178
Mus musculus	RefSeq	ILMN_212627	ILMN_249397	LIMCH1	NM_001001980.2	NM_001001980.2		77569	134053895	NM_001001980.2	Limch1	NP_001001980.2	ILMN_2628603	002510382	S	4834	TGGAGGTCCACTGGCCACTTTGTCATTTGGACGAGCTGTTACTGGATTGA	5	+	67447090-67447139	5qC3.1	Mus musculus LIM and calponin homology domains 1 (Limch1), mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	3732412D22Rik; mKIAA1102	3732412D22Rik; mKIAA1102
Mus musculus	RefSeq	ILMN_212008	ILMN_212008	ABCB1B	NM_011075.1	NM_011075.1		18669	6755045	NM_011075.1	Abcb1b	NP_035205.1	ILMN_2918499	004920129	S	3916	CCAGGCTGGAGCAAAGCGCTCATGAGCTGTGACTATCTGAGGTGCTAAGT	5	+	8865925-8865950:8865951-8865974	5qA1	Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 1B (Abcb1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates [goid 46581] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out) [goid 8559] [evidence IEA]	Pgy-1; Mdr1; Abcb1; mdr; Pgy1; Mdr1b	Pgy-1; Mdr1; Abcb1; mdr; Pgy1; Mdr1b
Mus musculus	RefSeq	ILMN_192042	ILMN_242605	TXNRD1	NM_001042523.1	NM_001042523.1		50493	110224446	NM_001042523.1	Txnrd1	NP_001035988.1	ILMN_2484465	001580338	S	3422	CAGAACAACAGACAGTGTAGGGTAACTAATCATGTGATTCTCTTAGTGGA	10	+	82360257-82360306	10qC1	Mus musculus thioredoxin reductase 1 (Txnrd1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Catalysis of the reaction: thioredoxin + NADP+ = thioredoxin disulfide + NADPH + H+ [goid 4791] [evidence IDA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a disulfide group [goid 16654] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	TR; TrxR1; TR1	TR; TrxR1; TR1
Mus musculus	Riken	ILMN_202967	ILMN_202967	A430015E08RIK	ri|A430015E08|PX00133F12|AK079686|884					AK079686	A430015E08Rik		ILMN_1239060	007380176	S	745	CGGTAAAGAATGTGGCTGCTTTTTGCCAGCGGCGGAAGAATTGGCCTGAG										
Mus musculus	RefSeq	ILMN_209635	ILMN_209635	LMNA	NM_019390.1	NM_019390.1		16905	9506842	NM_019390.1	Lmna	NP_062263.1	ILMN_1255510	004880360	S	1468	CTGCCAGCCTAGGGCAGCTCTCCCACCTCCATGCCAAAGTCTTTTCATTA	3	-	88287146-88287195	3qF1	Mus musculus lamin A (Lmna), transcript variant 2, mRNA.	Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209635	ILMN_209635	LMNA	NM_019390.1	NM_019390.1		16905	9506842	NM_019390.1	Lmna	NP_062263.1	ILMN_1254405	004120753	S	1136	GAATGGTGACGATCCTTTGATGACCTATCGCTTCCCACCGAAGTTCACCC	3	-	88287991-88288040	3qF1	Mus musculus lamin A (Lmna), transcript variant 2, mRNA.	Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209635	ILMN_209635	LMNA	NM_019390.1	NM_019390.1		16905	9506842	NM_019390.1	Lmna	NP_062263.1	ILMN_2597710	006350682	S	1163	TCGCTTCCCACCGAAGTTCACCCTAAAGGCTGGGCAGGTGGTGACGATCT	3	-	88287864-88287868:88287969-88288013	3qF1	Mus musculus lamin A (Lmna), transcript variant 2, mRNA.	Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209635	ILMN_209635	LMNA	NM_019390.1	NM_019390.1		16905	9506842	NM_019390.1	Lmna	NP_062263.1	ILMN_2662387	001050072	S	1028	TAGCGGGCGTGTGGCGGTAGAGGAAGTCGATGAAGAGGGAAAGTTCGTGC	3	-	88288559-88288608	3qF1	Mus musculus lamin A (Lmna), transcript variant 2, mRNA.	Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220949	ILMN_220949	4933426M11RIK	NM_178682.3	NM_178682.3		217684	31581563	NM_178682.3	4933426M11Rik	NP_848797.1	ILMN_1254551	000150474	S	4646	TGGATTGCCAAGTAGGGAGAGGAAGTAGTTGAGGGTTGCATGGCTGTATC	12	+	81981491-81981540	12qD1	Mus musculus RIKEN cDNA 4933426M11 gene (4933426M11Rik), mRNA.				mKIAA0247	mKIAA0247
Mus musculus	MEEBO	ILMN_189021	ILMN_189021	SCL0003901.1_33	scl0003901.1_33	XM_147419.4			38090552	XM_147419.4	scl0003901.1_33		ILMN_2457678	004390209	S	17	ACTGAGAGGCATGCGGTATCACCCCATCGACATAGAAACCTCCGTGATCC										
Mus musculus	Riken	ILMN_206990	ILMN_206990	NNAT	ri|5730414I02|PX00643J18|AK077465|774					AK077465	Nnat		ILMN_1241164	006980167	S	432	AAATACCCGCTATATTCAGGCTCGATCCCAGGAGGGAGGCGGGGCACTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [evidence IMP]			
Mus musculus	RefSeq	ILMN_201028	ILMN_319650	LOC100042104	XM_001476961.1	XM_001476961.1		100042104	149273765	XM_001476961.1	LOC100042104	XP_001477011.1	ILMN_1230735	006450142	S	721	AGCTGAGGAGAGATCAGGAGGTGACAGTGATGTGTTGATAGGTAACTGGG	Y|NT_166407.1	-	104728-104777		PREDICTED: Mus musculus similar to spermiogenesis specific transcript on the Y 1 (LOC100042104), mRNA.					
Mus musculus	RefSeq	ILMN_209852	ILMN_251881	CHIT1	NM_027979.1	NM_027979.1		71884	58037264	NM_027979.1	Chit1	NP_082255.1	ILMN_1214574	000160711	S	1579	GGCCTGGTGTTTAGAGCCTCTTGCAAATGTTGTACCTGGAGCTAAGTTCC	1	+	136047980-136048013	1qE4	Mus musculus chitinase 1 (chitotriosidase) (Chit1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages [goid 272] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]; The chemical reactions and pathways involving chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6030] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 8061] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]	2300002L19Rik	2300002L19Rik
Mus musculus	RefSeq	ILMN_196329	ILMN_325890	PTRH2	NM_001098810.2	NM_001098810.2		217057	150456417	NM_001098810.2	Ptrh2	NP_001092280.1	ILMN_1238213	004780427	S	2689	TGAAAGAGATCAACCTGAGAGGGAGATGCGTAAGGGTTGGGGTGCTAGGC				11qC	Mus musculus peptidyl-tRNA hydrolase 2 (Ptrh2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA [goid 4045] [evidence IEA]	CGI-147; Bit1; A230072I16Rik	CGI-147; Bit1; A230072I16Rik
Mus musculus	RefSeq	ILMN_197031	ILMN_322775	LOC665237	XR_031476.1	XR_031476.1		665237	149245296	XR_031476.1	LOC665237		ILMN_1233489	003800202	S	852	TGCCCATCCAGCAGTTCCCCACGGAAGACTGGAGTGCACAGCCAGTCACT	1	+	165554694-165554743	1qH2.2	PREDICTED: Mus musculus similar to hCG31107 (LOC665237), misc RNA.					
Mus musculus	RefSeq	ILMN_209735	ILMN_209735	IFNAR2	NM_010509.1	NM_010509.1		15976	6754299	NM_010509.1	Ifnar2	NP_034639.1	ILMN_2598703	006840154	S	2469	GGTAGCCTTGGGAGAGATGCCCAAAGTGGATGAAGGGTGTAGGGTCCTCC	16	+	91404321-91404370	16qC3.3	Mus musculus interferon (alpha and beta) receptor 2 (Ifnar2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a type I interferon to initiate a change in cell activity. Type I interferons include the interferon-alpha, beta, delta, epsilon, zeta, kappa, tau, and omega gene families [goid 4905] [evidence IDA]	AI747302; Ifnar-2	AI747302; Ifnar-2
Mus musculus	RefSeq	ILMN_209735	ILMN_209735	IFNAR2	NM_010509.1	NM_010509.1		15976	6754299	NM_010509.1	Ifnar2	NP_034639.1	ILMN_2971514	007000086	S	2328	GGAGGGGGAGAAGCCGCAGGAATAATTCTAGGATCCAACGCGTGACTCAG	16	+	91404180-91404229	16qC3.3	Mus musculus interferon (alpha and beta) receptor 2 (Ifnar2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a type I interferon to initiate a change in cell activity. Type I interferons include the interferon-alpha, beta, delta, epsilon, zeta, kappa, tau, and omega gene families [goid 4905] [evidence IDA]	AI747302; Ifnar-2	AI747302; Ifnar-2
Mus musculus	RefSeq	ILMN_209735	ILMN_209735	IFNAR2	NM_010509.1	NM_010509.1		15976	6754299	NM_010509.1	Ifnar2	NP_034639.1	ILMN_1225311	006220010	S	950	GTAGGAATAACTACTTCGTGTTTGGTAGTGATGGTTTTCGTGAGCACTAT	16	+	91388263-91388312	16qC3.3	Mus musculus interferon (alpha and beta) receptor 2 (Ifnar2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a type I interferon to initiate a change in cell activity. Type I interferons include the interferon-alpha, beta, delta, epsilon, zeta, kappa, tau, and omega gene families [goid 4905] [evidence IDA]	AI747302; Ifnar-2	AI747302; Ifnar-2
Mus musculus	RefSeq	ILMN_221049	ILMN_244898	BC003940	NM_001033231.2	NM_001033231.2		192173	124378020	NM_001033231.2	BC003940	NP_001028403.1	ILMN_1232298	005390397	S	1130	TTTTGTGCCCTCTTGAATCCAAGTGTCTGTAGCTTTGGAGACTGAGGGTC	11	-	120404227-120404276	11qE2	Mus musculus cDNA sequence BC003940 (BC003940), mRNA.					
Mus musculus	Riken	ILMN_205491	ILMN_205491	D030029G14RIK	ri|D030029G14|PX00180O01|AK050882|1545					AK050882	D030029G14Rik		ILMN_1248604	002190356	S	1304	GAGAATGCGCAGCGCCACCACACCTGACTTCCCACCTGGGTTCTTCGAAT										
Mus musculus	RefSeq	ILMN_218777	ILMN_218777	CSGALNACT2	NM_030165.3	NM_030165.3		78752	85861213	NM_030165.3	Csgalnact2	NP_084441.3	ILMN_2700042	006940369	S	3464	ATGGTATTTAAAATTAGGGTACTTAATGATTTTCAAAGGTGATTTCAGCT	6	-	118057617-118057666	6qF1	Mus musculus chondroitin sulfate N-acetylgalactosaminyltransferase 2 (Csgalnact2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP [goid 47237] [evidence IEA]	4632415D10Rik	4632415D10Rik
Mus musculus	RefSeq	ILMN_216224	ILMN_216224	NAALAD2	NM_028279.3	NM_028279.3		72560	118130446	NM_028279.3	Naalad2	NP_082555.2	ILMN_1245593	000540600	S	2380	CAGTGCTGCTGGGAATCTGAAGAAAAAACGGTGTCTTTTCCTTTGATGTT	9	-	18127725-18127774	9qA2	Mus musculus N-acetylated alpha-linked acidic dipeptidase 2 (Naalad2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	MGC124348; NAALADASE2; MGC124349; NAADALASE2; GCPIII; D9Ertd285e; 2700022G20Rik	MGC124348; NAALADASE2; MGC124349; NAADALASE2; GCPIII; D9Ertd285e; 2700022G20Rik
Mus musculus	RefSeq	ILMN_202009	ILMN_322705	LOC100048330	XM_001479795.1	XM_001479795.1		100048330	149258100	XM_001479795.1	LOC100048330	XP_001479845.1	ILMN_1218291	000580091	S	1559	GAGTACCCAGAGGCTTCCGTCCTGCCACTAAAGCGAGTGCTAACGGGGTT					PREDICTED: Mus musculus hypothetical protein LOC100048330 (LOC100048330), mRNA.					
Mus musculus	RefSeq	ILMN_197683	ILMN_197683	LOC333771	XM_290033.2	XM_290033.2			38077361	XM_290033.2	LOC333771		ILMN_1255759	004540240	S	585	TTGTCACACCAACAGCATCAGTCAGGACAGACGAGGACCAGAGGAGCTCT										
Mus musculus	MEEBO	ILMN_185290	ILMN_185290	UCN2	scl36449.1.1_207						Ucn2		ILMN_2425790	003940653	S	19	AACATAGAACCCCAGTGCTGCACCTGAAGTCCATCTAAGGTCCACAGGCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence ISS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a G-protein-coupled receptor [goid 1664] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223441	ILMN_241129	SCAP	NM_001001144.1	NM_001001144.1		235623	47564087	NM_001001144.1	Scap	NP_001001144.1	ILMN_2764143	006330603	S	4114	CCAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCA	9	+	110287341-110287390	9qF2	Mus musculus SREBF chaperone (Scap), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence IDA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence TAS]	mKIAA0199; 9530044G19	mKIAA0199; 9530044G19
Mus musculus	RefSeq	ILMN_219942	ILMN_219942	CCDC54	NM_027046.2	NM_027046.2		69339	31982635	NM_027046.2	Ccdc54	NP_081322.1	ILMN_2715474	005310097	S	1104	TGAGGAACCACAAATCATACCCCAGAGAGACTACGCCTTCACCGGAGCCA	16	-	50509349-50509398	16qB5	Mus musculus coiled-coil domain containing 54 (Ccdc54), mRNA.				1700007N18Rik; BB013989; AI644412; NYD-SP17	1700007N18Rik; BB013989; AI644412; NYD-SP17
Mus musculus	RefSeq	ILMN_194608	ILMN_247680	DEPDC1B	NM_178683.4	NM_178683.4		218581	146198721	NM_178683.4	Depdc1b	NP_848798.1	ILMN_2628708	000010161	S	2233	GCAGATTTGCCTGTCGCTCTTTGATTACCCGTATGCCGGGCTGGGTCTGC				13qD2.1	Mus musculus DEP domain containing 1B (Depdc1b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	XTP1; 9830132O03; AW260467	XTP1; 9830132O03; AW260467
Mus musculus	RefSeq	ILMN_197337	ILMN_197337	LOC329543	XM_130612.4	XM_130612.4			38075197	XM_130612.4	LOC329543		ILMN_1240865	000770427	S	1878	GCCTGACTGAGGGAATGTCAGCAGTTGTCCACAAAGGCTCTTCATACTCC										
Mus musculus	RefSeq	ILMN_212722	ILMN_212722	RP23-438H3.2	NM_183280.2	NM_183280.2		69357	50356001	NM_183280.2	Rp23-438h3.2	NP_899103.1	ILMN_2629544	007400653	S	192	CCCTGTTCCAAATGTAACAAGAAGATAAGAAACCCCAAGGTGCAGGAGCC	X	+	90428757-90428795:90428939-90428949	XqC3	Mus musculus hypothetical protein LOC69357 (Rp23-438h3.2), mRNA.				MGC74336; MGC107104	MGC74336; MGC107104
Mus musculus	RefSeq	ILMN_199354	ILMN_199354	LOC385662	XM_358872.1	XM_358872.1			38081105	XM_358872.1	LOC385662		ILMN_1221548	001300204	S	489	CAGCCCTGAAGTAAGACCTAACGTAAGGCAGATAATAGATAGTGGCACTG										
Mus musculus	MEEBO	ILMN_216381	ILMN_216381	IGK-V33	IGKV13-84_AJ231273_Ig_kappa_variable_13-84_10	XM_144817.1			20823652	XM_144817.1	Igk-V33		ILMN_1248308	007510066	S	13	CTCAACTTCTGCTCTTACTGCTGTTTGGAATCCCAGGCATGATATGTGAC										
Mus musculus	RefSeq	ILMN_187335	ILMN_243618	GOLM1	NM_027307.4	NM_027307.4		105348	93141215	NM_027307.4	Golm1	NP_081583.3	ILMN_2623536	003460333	S	3455	GCACCACTTTCCAACAAGACCTGAAACTCAGCGGCCTACAAACTCCTACC	13	-	59736545-59736594	13qB2	Mus musculus golgi membrane protein 1 (Golm1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Golph2; AW125446; MGC107447; PSEC0257; GP73; D030064E01Rik; 2310001L02Rik	Golph2; AW125446; MGC107447; PSEC0257; GP73; D030064E01Rik; 2310001L02Rik
Mus musculus	MEEBO	ILMN_213041	ILMN_213041	OLFR618	scl0259049.1_70	XM_145799.1			20839255	XM_145799.1	Olfr618		ILMN_1241757	007050601	S	624	GGCCTAGACATTATGCTTATCATCATCTCCTACACCCTTATACTTAATAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_198092	ILMN_198092	LOC381068	XM_354988.1	XM_354988.1			38081809	XM_354988.1	LOC381068		ILMN_2530466	002070193	S	664	TGGTGCAAAGCTTGATAAGGTCCGCAGCCAGGAAACTGCGTCTGAGGAGC										
Mus musculus	MEEBO	ILMN_223979	ILMN_223979	CTGF	scl39079.4_283				6753877	NM_010217	Ctgf		ILMN_1238215	004760224	S	2032	GGGAATTGTGACCTGAGTGACTCTCTGTCAGAACAAATGCTGTGCAGGTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IDA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IDA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]		
Mus musculus	RefSeq	ILMN_224587	ILMN_209707	C130090K23RIK	NM_181323.2	NM_181323.2		231293	31342193	NM_181323.2	C130090K23Rik	NP_851840.1	ILMN_3163255	001710204	A	2256	GTCGTCATAGACCACCGAGGAGTTCCCAAGAACATTCACTTCAACCCCAG	5	+	73832650-73832699	5qC3.2	Mus musculus RIKEN cDNA C130090K23 gene (C130090K23Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]			
Mus musculus	RefSeq	ILMN_209707	ILMN_209707	C130090K23RIK	NM_181323.2	NM_181323.2		231293	31342193	NM_181323.2	C130090K23Rik	NP_851840.1	ILMN_2680601	005900307	S	2606	TAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTG	5	+	73844557-73844606	5qC3.2	Mus musculus RIKEN cDNA C130090K23 gene (C130090K23Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]			
Mus musculus	Riken	ILMN_203036	ILMN_203036	6720485J18RIK	ri|6720485J18|PX00060C08|AK032987|3151					AK032987	6720485J18Rik		ILMN_2554238	002230021	S	2783	GAAAGAGTGTGGTTGGTGTCTTTGTTCTCTGTGTTTGGCCTACTGTAGCC										
Mus musculus	RefSeq	ILMN_187974	ILMN_187974	ZFP185	NM_009549.2	NM_009549.2		22673	31544060	NM_009549.2	Zfp185	NP_033575.2	ILMN_2448749	002940484	S	2403	CTAATATGCTGCTCTAAGTCAACCTCACTCTGCTGCCTTTGGGCTCAGCA	X	+	70275426-70275475	XqA7.3	Mus musculus zinc finger protein 185 (Zfp185), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	P1-; P1	P1-; P1
Mus musculus	Riken	ILMN_206921	ILMN_206921	A630004A15RIK	ri|A630004A15|PX00144D17|AK080263|1356					AK080263	A630004A15Rik		ILMN_1249819	006220075	S	1152	ACTCCCAGGATGAGTACCTGCCATTGGGCTGAATGAACAGAACGCTACAC										
Mus musculus	RefSeq	ILMN_218531	ILMN_218531	FAM163A	NM_177838.2	NM_177838.2		329274	31342884	NM_177838.2	Fam163a	NP_808506.1	ILMN_2890145	006510367	S	3517	CACACTGCCCTTCAGCCCACATTGTTCAAGGCACAGGTTCCACCCTTGGC	1	-	157923214-157923263	1qG3	Mus musculus family with sequence similarity 163, member A (Fam163a), mRNA.					
Mus musculus	RefSeq	ILMN_196827	ILMN_196827	LOC215723	XM_147495.1	XM_147495.1			20881697	XM_147495.1	LOC215723		ILMN_2525941	006550307	S	181	GGTGGCCAGGCTCTTCCACTTGGTGTGCGGAGTCCGGGATGCCTGTGTGA										
Mus musculus	RefSeq	ILMN_215794	ILMN_215794	BC029684	XM_205950.7	XM_205950.7		242707	149253147	XM_205950.7	BC029684	XP_205950.7	ILMN_2663666	005960328	S	1115	GCTATGCCGCCAGCCTGGCGCTCGTGCCACCGCTGCGCTTGGGATTTGTG	4	+	136193458-136193507	4qD3	PREDICTED: Mus musculus cDNA sequence BC029684 (BC029684), mRNA.					
Mus musculus	RefSeq	ILMN_195765	ILMN_195765	ZFPM2	NM_011766.2	NM_011766.2		22762	34328207	NM_011766.2	Zfpm2	NP_035896.1	ILMN_2863601	000610360	S	4635	CTTTCGCCGATGCAGCCCTGTCTCAATTTTTCAACCTTTGCTGTTAAATG	15	+	40934327-40934376	15qB3.1	Mus musculus zinc finger protein, multitype 2 (Zfpm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	FOG2; B330005D23Rik; FOG-2	FOG2; B330005D23Rik; FOG-2
Mus musculus	RefSeq	ILMN_223478	ILMN_223478	PARVG	NM_022321.3	NM_022321.3		64099	141802814	NM_022321.3	Parvg	NP_071716.2	ILMN_2764580	003310612	S	2320	CCTTTCATAGAGACCTTCTTCTGTGCCCCATCTCTTCTCTCTGGAGCATC	15	+	84173073-84173122	15qE2	Mus musculus parvin, gamma (Parvg), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AI413459	AI413459
Mus musculus	RefSeq	ILMN_219849	ILMN_219849	DMKN	NM_172899.3	NM_172899.3		73712	142375786	NM_172899.3	Dmkn	NP_766487.2	ILMN_1229763	000050521	S	1708	GCGGACTCCTCACGAATGCACACAGGTCTTCAGGGAGTTTGACTGTCCTT	7	+	31565778-31565827	7qB1	Mus musculus dermokine (Dmkn), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		cI-36; SK89; AW561900; 1110014F24Rik; SK30; C130074A08	cI-36; SK89; AW561900; 1110014F24Rik; SK30; C130074A08
Mus musculus	RefSeq	ILMN_217114	ILMN_217114	CNDP2	NM_023149.2	NM_023149.2		66054	31981272	NM_023149.2	Cndp2	NP_075638.2	ILMN_1215733	003170767	S	1681	CCTGAGACTTACTGGGGACAACTGACTGGCCATGATTGGGGGTAGGAGGG	18	-	84837181-84837230	18qE4	Mus musculus CNDP dipeptidase 2 (metallopeptidase M20 family) (Cndp2), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence ISA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IDA]	0610010E05Rik; Pep1; C76600; Pep-1; Cn2; Dip-2	0610010E05Rik; Pep1; C76600; Pep-1; Cn2; Dip-2
Mus musculus	RefSeq	ILMN_212395	ILMN_212395	AOC3	NM_009675.1	NM_009675.1		11754	6753065	NM_009675.1	Aoc3	NP_033805.1	ILMN_2625920	003140400	S	4314	GAGAGGGAATCAGGTTCTGCCTGCCCTTCTGAACATCATGGATTGGAACC	11	+	101200662-101200711	11qD	Mus musculus amine oxidase, copper containing 3 (Aoc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds [goid 48038] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]	VAP1; SSAO	VAP1; SSAO
Mus musculus	RefSeq	ILMN_222068	ILMN_259609	4930571C24RIK	XM_913562.2	XM_913562.2		78217	94366182	XM_913562.2	4930571C24Rik	XP_918655.1	ILMN_1228034	004480762	S	337	CATGTGGAGTCCCACCTCATGGACCCTGATCTGGACGTATCCATGATGCC				2qA3	PREDICTED: Mus musculus RIKEN cDNA 4930571C24 gene (4930571C24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187175	ILMN_187175	ZSCAN20	NM_177758.3	NM_177758.3		269585	41054997	NM_177758.3	Zscan20	NP_808426.1	ILMN_1239279	003170601	S	3677	GTTACCAAGGTATGAAAGACCTGGGTTCTAGGTGAAGGTAGAGGCCCAGG	4	-	128261018-128261067	4qD2.2	Mus musculus zinc finger and SCAN domains 20 (Zscan20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC30798; Zfp31; C130001F22; Zkscan20	MGC30798; Zfp31; C130001F22; Zkscan20
Mus musculus	RefSeq	ILMN_187175	ILMN_187175	ZSCAN20	NM_177758.3	NM_177758.3		269585	41054997	NM_177758.3	Zscan20	NP_808426.1	ILMN_2441811	003170451	S	2057	GACTAAGGTTTGAAGGTACTTCCAAGTGTAATTTGGTTTGCACACGCCCA	4	-	128262638-128262687	4qD2.2	Mus musculus zinc finger and SCAN domains 20 (Zscan20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC30798; Zfp31; C130001F22; Zkscan20	MGC30798; Zfp31; C130001F22; Zkscan20
Mus musculus	RefSeq	ILMN_220349	ILMN_220349	5730528L13RIK	NM_028137.2	NM_028137.2		66665	141802429	NM_028137.2	5730528L13Rik	NP_082413.1	ILMN_1222594	005900682	S	1490	CCAGCAGAGGCGGCTTCAATACAAGTAGGGAGGTTAACAACTTTGAGGGC	4	+	48574684-48574733	4qB1	Mus musculus RIKEN cDNA 5730528L13 gene (5730528L13Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	2410046L14Rik; 2810429P03Rik	2410046L14Rik; 2810429P03Rik
Mus musculus	RefSeq	ILMN_210869	ILMN_210869	SLITRK3	NM_198864.2	NM_198864.2		386750	42734492	NM_198864.2	Slitrk3	NP_942564.2	ILMN_2884780	004880689	S	3641	CTGAAACTCGAGACTTTGACTGTGCCATGTGTGAGGTATACTGGGGATCG	3	-	72852088-72852137	3qE3	Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_256635	ILMN_256635	ADAM39	NM_001025380.3	NM_001025380.3		546055	119392067	NM_001025380.3	Adam39	NP_001020551.3	ILMN_3161330	006380563	S	2063	GTGTCAGTAAGCCAATTTGGACAAGTCAGTGTTCACCCACTACATGCAGC	8	+	41911837-41911886	8qA4	Mus musculus a disintegrin and metallopeptidase domain 39 (Adam39), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	1700056P18Rik	1700056P18Rik
Mus musculus	RefSeq	ILMN_217232	ILMN_217232	3110049J23RIK	NM_026085.2	NM_026085.2		67307	142388988	NM_026085.2	3110049J23Rik	NP_080361.1	ILMN_2680628	005090594	S	2119	CTAAGGGCGTGTGAGACGAAATCTTTCCCTCCTGTGTGGCTTAGAATGGC	10	+	62521468-62521517	10qB4	Mus musculus RIKEN cDNA 3110049J23 gene (3110049J23Rik), mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Mawbp	Mawbp
Mus musculus	RefSeq	ILMN_197504	ILMN_197504	LOC219145	XM_122761.3	XM_122761.3			38076337	XM_122761.3	LOC219145		ILMN_1215332	001050047	S	393	GGGTGGTGGTCGTGGAAGCGGTTTTGGTGGCAATGACAATTTTGGTTGAG										
Mus musculus	RefSeq	ILMN_219494	ILMN_219494	MBD4	NM_010774.1	NM_010774.1		17193	6754651	NM_010774.1	Mbd4	NP_034904.1	ILMN_1213981	005570477	S	1924	GACGTGTCGGAGCTTCTCAAGCCTCTTGGTCTCTACGATCTCCGTGCAAA	6	-	115794608-115794657	6qE3	Mus musculus methyl-CpG binding domain protein 4 (Mbd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IMP]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Med1	Med1
Mus musculus	RefSeq	ILMN_213105	ILMN_329571	9230113P08RIK	XM_001477936.1	XM_001477936.1		77908	149259542	XM_001477936.1	9230113P08Rik	XP_001477986.1	ILMN_2633706	001850639	S	455	GCTGGAAGTTTGACTTATGGACACAAAACAGGACTTGTACCACAGAAAAC				9qA4	PREDICTED: Mus musculus RIKEN cDNA 9230113P08 gene (9230113P08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_261387	ILMN_261387	CALM2	NM_007589.4	NM_007589.4		12314	46518512	NM_007589.4	Calm2	NP_031615.1	ILMN_2856697	005090176	S	449	CAGGGAAGCAGACATTGACGGGGACGGTCAGGTAAACTACGAAGAGTTTG	17	-	87833365-87833366:87833367-87833395:87834416-87834434	17qE4	Mus musculus calmodulin 2 (Calm2), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]	AL024017; 1500001E21Rik	AL024017; 1500001E21Rik
Mus musculus	RefSeq	ILMN_215475	ILMN_215475	OLFM2	NM_173777.3	NM_173777.3		244723	148747132	NM_173777.3	Olfm2	NP_776138.2	ILMN_2660009	001260576	S	1286	ACATCTCGATGCTGGATTACAACCCCAGGGAGCGGGCCCTGTATACCTGG				9qA3	Mus musculus olfactomedin 2 (Olfm2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A030009A06Rik	A030009A06Rik
Mus musculus	Riken	ILMN_205716	ILMN_205716	TBN-PENDING	ri|C630015H02|PX00084O01|AK049949|1692					AK049949	Tbn-pending		ILMN_1251084	003130373	S	1496	GCTGTTCTGTTCTGTTCTCTTCTGTCGTGTGAACTGGCTCTCGTGCAGGC										
Mus musculus	Riken	ILMN_204674	ILMN_204674	PNG1-PENDING	ri|A130099A10|PX00126H04|AK038365|3299					AK038365	Png1-pending		ILMN_1222473	002000470	S	3088	GGCTGGCCTTGAACTCACGGATCTGCCTCAGCCTCCTTATTCCTGGATTA										
Mus musculus	RefSeq	ILMN_199312	ILMN_242800	LOC631029	XR_003705.1	XR_003705.1		631029	94418307	XR_003705.1	LOC631029		ILMN_1235295	004890017	S	733	TGTTTCAGTCAAGTTGAGCACATCAGGAGAATTCATACAGGAGAGAAACC					PREDICTED: Mus musculus similar to zinc finger protein 665 (LOC631029), mRNA.					
Mus musculus	RefSeq	ILMN_227401	ILMN_227401	LOC546723	NM_001037169.1	NM_001037169.1		546723	81230480	NM_001037169.1	LOC546723	NP_001032246.1	ILMN_2971370	001660014	S	126	CAACCGGCCATGGCAGCCTCGCACCGGCCCATCAAGGGAATCCTGAAGAA	19	-	30605501-30605542:30605543-30605550	19qC1	Mus musculus similar to protein phosphatase 1, regulatory (inhibitor) subunit 2 (LOC546723), mRNA.				MGC118257	MGC118257
Mus musculus	RefSeq	ILMN_239831	ILMN_239831	4930526D03RIK	NM_199023.1	NM_199023.1		277496	39841044	NM_199023.1	4930526D03Rik	NP_950188.1	ILMN_2858266	001580554	S	623	GCAACATCTTCCCCCGATGACTGAGACCTTGGCGTTCAGAGACCCTACGG	2	-	181626244-181626275:181626276-181626293	2qH4	Mus musculus RIKEN cDNA 4930526D03 gene (4930526D03Rik), mRNA.				Gm692	Gm692
Mus musculus	RefSeq	ILMN_224074	ILMN_245546	SMTNL1	NM_024230.2	NM_024230.2		68678	118129859	NM_024230.2	Smtnl1	NP_077192.1	ILMN_2774281	005720133	S	1567	AAGCGGAGCCCAGCTGCCAACCGTGGCCTCGGGGTGCTTTCGCACCACCA	2	-	84651477-84651526	2qD	Mus musculus smoothelin-like 1 (Smtnl1), mRNA.				RP23-399J8.5; CHASM; 1110030K22Rik	RP23-399J8.5; CHASM; 1110030K22Rik
Mus musculus	MEEBO	ILMN_209894	ILMN_209894	1700052I22RIK	scl42288.2.1_61				51766917	XM_488642	1700052I22Rik		ILMN_2600199	001340487	S	396	CACCTCTAATGTTCTGCAGTTTTCTCAGACCCCTCTTCTACCTAATACTC										
Mus musculus	Riken	ILMN_203001	ILMN_203001	NRP	ri|5330401L20|PX00053A17|AK030358|2575					AK030358	Nrp		ILMN_1247094	003140687	S	2452	CAGCCATGCTGAGGAGGAAGCAGATCAGGTCCTGGATTGGGATTTTGCTC										
Mus musculus	RefSeq	ILMN_257606	ILMN_257606	LUM	NM_008524.1	NM_008524.1		17022	6678739	NM_008524.1	Lum	NP_032550.1	ILMN_3001540	004180475	S	1002	GATCAAGCATCTGCGCTTGGATGGCAATCCTCTCACTCAGAGCAGTCTGC	10	+	97034593-97034642	10qC3	Mus musculus lumican (Lum), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLRR2D; Ldc	SLRR2D; Ldc
Mus musculus	RefSeq	ILMN_203150	ILMN_227898	EG623172	XM_897562.2	XM_897562.2		623172	94364763	XM_897562.2	EG623172	XP_902655.2	ILMN_1260328	005420156	S	2348	GTGGCTAAGACCTCACAAAAATGTGCTTGCCTCTGCCTCCCAAGTGCTAG	1	-	196444667-196444716	1qH6	PREDICTED: Mus musculus predicted gene, EG623172 (EG623172), mRNA.					
Mus musculus	MEEBO	ILMN_194306	ILMN_194306	HOXB13	scl40994.2_255				31982276	NM_008267	Hoxb13		ILMN_1222677	003780204	S	20	CCCGGTTGTTCTGACCCAGTTGGATTAGGGTTTGTTGGGCATTTAGGAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IGI]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IGI]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IMP]; The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2064] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_190691	ILMN_190691	TSPAN12	NM_173007.3	NM_173007.3		269831	146198700	NM_173007.3	Tspan12	NP_766595.1	ILMN_1249289	006220273	S	2027	GGAAATTACCAGTTTGACACATAGGAATCTCTGTAAGTCTGGCTGCCGGA				6qA3.1	Mus musculus tetraspanin 12 (Tspan12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI426782; AW111457; 9030619E17; Tm4sf12; AI663988	AI426782; AW111457; 9030619E17; Tm4sf12; AI663988
Mus musculus	RefSeq	ILMN_196765	ILMN_196765	IFNA6	NM_008335.1	NM_008335.1		15969	6680368	NM_008335.1	Ifna6	NP_032361.1	ILMN_1242716	007610561	S	747	GCCAAGACGCTGCAGCAATATTGAGCAATTATTTTCAGCATGTATAGCCA	4	+	88299325-88299374	4qC4	Mus musculus interferon alpha 6 (Ifna6), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	Ifa6; Ifna8; Ifa8	Ifa6; Ifna8; Ifa8
Mus musculus	Riken	ILMN_206895	ILMN_206895	E030040G24RIK	ri|E030040G24|PX00206M23|AK087259|1116					AK087259	E030040G24Rik		ILMN_1233117	004150370	S	785	TGGGCCTCAGGTTCCAAAGCTGGCGCGGAGGGCTGTGGTTGGAGAAGTTT										
Mus musculus	RefSeq	ILMN_216401	ILMN_216401	TROVE2	NM_013835.1	NM_013835.1		20822	7305522	NM_013835.1	Trove2	NP_038863.1	ILMN_2952466	003840626	S	3502	ACCCATAAGGGAAATAAGGGTCACCTCCCGGCAGCCCTCCTACAGTATAG	1	-	145518104-145518153	1qF	Mus musculus TROVE domain family, member 2 (Trove2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI646302; A530054J02Rik; SS-A/Ro; 1810007I17Rik; Ssa2; Ssa	AI646302; A530054J02Rik; SS-A/Ro; 1810007I17Rik; Ssa2; Ssa
Mus musculus	RefSeq	ILMN_223391	ILMN_223391	REPS2	NM_178256.3	NM_178256.3		194590	84490400	NM_178256.3	Reps2	NP_839987.2	ILMN_2763434	003190431	S	2168	TATGACTTTCTCTTTTGCACTTCACTTGTGTATTTTACAGTGGTAGTAAA	X	-	158855298-158855347	XqF4	Mus musculus RALBP1 associated Eps domain containing protein 2 (Reps2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	POB1	POB1
Mus musculus	RefSeq	ILMN_213145	ILMN_213145	2310042E22RIK	NM_025634.2	NM_025634.2		66561	141803385	NM_025634.2	2310042E22Rik	NP_079910.1	ILMN_2634140	000050491	S	1184	GTTTCTGGTCTTTCATTGGAAAGAACAAAATGGTGCTTTCCTGTCATGGC	16	-	21152784-21152833	16qB1	Mus musculus RIKEN cDNA 2310042E22 gene (2310042E22Rik), mRNA.				MGC144564; MGC144565	MGC144564; MGC144565
Mus musculus	RefSeq	ILMN_216019	ILMN_216019	MAGOHB	NM_025564.2	NM_025564.2		66441	142384147	NM_025564.2	Magohb	NP_079840.1	ILMN_1223176	004830121	S	482	GTGTTCAGCCTCATTGGTCTACACTTCAAGATTAAGCCAATTTGAATGGG	6	-	131234641-131234646:131234647-131234690	6qF3	Mus musculus mago-nashi homolog B (Drosophila) (Magohb), mRNA.				magoh; mago	magoh; mago
Mus musculus	RefSeq	ILMN_218452	ILMN_317766	LOC100046168	XM_001475723.1	XM_001475723.1		100046168	149270002	XM_001475723.1	LOC100046168	XP_001475773.1	ILMN_2696008	005090100	S	1424	CTGGAAGCAAAACCATAGTGCAAAGTTCATTGTAGTGTTACCAAAAAATG					PREDICTED: Mus musculus similar to Nedd4 WW domain-binding protein 5 (LOC100046168), mRNA.					
Mus musculus	RefSeq	ILMN_202395	ILMN_236815	RABL3	NM_001042499.1	NM_001042499.1		67657	109948289	NM_001042499.1	Rabl3	NP_001035964.1	ILMN_1216900	001470370	S	383	CCGGAGTCCTGGTGACAAATGGGGATTATGACCGAGAACAGTTTGCTGAT	16	+	37560174-37560195:37563702-37563729	16qB3	Mus musculus RAB, member of RAS oncogene family-like 3 (Rabl3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AA958834; 4930553C05Rik	AA958834; 4930553C05Rik
Mus musculus	RefSeq	ILMN_220429	ILMN_220429	EIF2B4	NM_010122.1	NM_010122.1		13667	6753735	NM_010122.1	Eif2b4	NP_034252.1	ILMN_2721894	005570376	S	1515	CCTCCGGTTGTTGAATCTGGTCTATGACGTGACTCCACCTGAGCTCGTGG	5	-	31490054-31490103	5qB1	Mus musculus eukaryotic translation initiation factor 2B, subunit 4 delta (Eif2b4), mRNA.	A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	Eif2b	Eif2b
Mus musculus	MEEBO	ILMN_193397	ILMN_193397	1700123M08RIK	scl25669.8.1_0				51709058	XM_489035	1700123M08Rik		ILMN_1231321	002340678	S	4	GGCACTGGACATGAGACATTCAAGAGCCTGGAGAAGAGACAAACGTTGTC										
Mus musculus	RefSeq	ILMN_219748	ILMN_219748	LEFTY2	NM_177099.3	NM_177099.3		320202	42734479	NM_177099.3	Lefty2	NP_796073.1	ILMN_2713164	006370184	S	1785	GGCCCAGGTGCATGCTGTAGATGTATTCTGTGTGCTCTTATCTTGGAAAC	1	+	182828557-182828606	1qH4	Mus musculus Left-right determination factor 2 (Lefty2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the transforming growth factor beta receptor [goid 5160] [evidence IEA]	6030463A22Rik; MGC98569; Ebaf; AV214969; Lefta	6030463A22Rik; MGC98569; Ebaf; AV214969; Lefta
Mus musculus	RefSeq	ILMN_197835	ILMN_197835	LOC329925	XM_285826.2	XM_285826.2			38078706	XM_285826.2	LOC329925		ILMN_1243924	007560019	S	458	CATCAGTGGCTGCACAAGAAGCCCGCCCCAGGAAGCAGAACATGGCAGAT										
Mus musculus	MEEBO	ILMN_192284	ILMN_192284	ZSWIM6	scl067263.1_23				51767906	XM_358311	Zswim6		ILMN_2524102	003370364	S	974	ACATTTTGCGCAGGTGCACCCTGACCACCCCGGGCATGGTGGGACTTCAT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192284	ILMN_192284	ZSWIM6	scl067263.1_23				51767906	XM_358311	Zswim6		ILMN_2524100	004780711	S	1596	AGTGGCGAAAGTCCACATAGCTCTCCTGTTTTCTGTATACGTTCACAGCC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215720	ILMN_215720	PANK2	NM_153501.1	NM_153501.1		74450	23943833	NM_153501.1	Pank2	NP_705721.2	ILMN_2662825	001110520	S	1372	GCACTCCTCGAGCTGTTGAAGATACCCTGACTTACCGAGAGGACTTCCTG	2	+	131122030-131122059:131122060-131122079	2qF1	Mus musculus pantothenate kinase 2 (Hallervorden-Spatz syndrome) (Pank2), nuclear gene encoding mitochondrial protein, mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + pantothenate = ADP + D-4'-phosphopantothenate [goid 4594] [evidence IGI]	AI642621; MGC118448; 4933409I19Rik	AI642621; MGC118448; 4933409I19Rik
Mus musculus	RefSeq	ILMN_187964	ILMN_260805	TNFSF15	NM_177371.2	NM_177371.2		326623	70778980	NM_177371.2	Tnfsf15	NP_796345.2	ILMN_1226506	000450189	S	727	GGAGACAGACTAATGGTAAACGTCAGTGACATCTCCTTGGTGGATTACAC	4	-	63390662-63390711	4qC1	Mus musculus tumor necrosis factor (ligand) superfamily, member 15 (Tnfsf15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways involving cytokines, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 42107] [evidence ISO]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence ISO]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISO]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	TL1; TL1A; VEGI	TL1; TL1A; VEGI
Mus musculus	RefSeq	ILMN_188133	ILMN_245209	1700003F12RIK	NM_029305.2	NM_029305.2		75480	141802924	NM_029305.2	1700003F12Rik	NP_083581.1	ILMN_1257491	005860025	S	311	AACTGAGGACCCGCTCGGCGCCCCAACGTGCTTCCCAGCGGTGGCGCCTA	2	+	154375362-154375411	2qH1	Mus musculus RIKEN cDNA 1700003F12 gene (1700003F12Rik), mRNA. XM_976207				RP23-109C16.3	RP23-109C16.3
Mus musculus	RefSeq	ILMN_196532	ILMN_196532	5430433E21RIK	XM_134954.7	XM_134954.7		74492	94386175	XM_134954.7	5430433E21Rik	XP_134954.2	ILMN_1253136	004880131	S	2836	TGGGCCGTCGATTGCTACCTCTTCCCTGATGTGTATCCCAAACTTGAAAT	9	-	65236574-65236623	9qC	PREDICTED: Mus musculus RIKEN cDNA 5430433E21 gene (5430433E21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196532	ILMN_196532	5430433E21RIK	XM_134954.7	XM_134954.7		74492	94386175	XM_134954.7	5430433E21Rik	XP_134954.2	ILMN_1230118	001740544	S	1158	TGTCAACAGCAAGGGAGCACTCTTCACGTCTGTAGTGCGTGGGGACACCG	9	-	65238252-65238301	9qC	PREDICTED: Mus musculus RIKEN cDNA 5430433E21 gene (5430433E21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220811	ILMN_225271	IFITM5	NM_053088.2	NM_053088.2		73835	110625835	NM_053088.2	Ifitm5	NP_444318.1	ILMN_1245864	001740100	S	379	GCCAAAGACTCTGCGGCTTTCTTCAGCACCAAGTTTGATGAGGAGGACTA	7	-	148135141-148135190	7qF5	Mus musculus interferon induced transmembrane protein 5 (Ifitm5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Hrmp1; 1110003J06Rik; AW213665; MGC118415	Hrmp1; 1110003J06Rik; AW213665; MGC118415
Mus musculus	RefSeq	ILMN_223024	ILMN_223024	HEYL	NM_013905.3	NM_013905.3		56198	117606342	NM_013905.3	Heyl	NP_038933.2	ILMN_1213139	003120215	S	4343	GGGCTAGCCTGAGCTCTGGGACTAATCTTTATTACATACTTGTTAATGAG	4	+	122926924-122926973	4qD2.2	Mus musculus hairy/enhancer-of-split related with YRPW motif-like (Heyl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence ISS]	hesr3; Hrt3; Hey3	hesr3; Hrt3; Hey3
Mus musculus	RefSeq	ILMN_199399	ILMN_199399	OLFR393	NM_147008.1	NM_147008.1		259010	22128920	NM_147008.1	Olfr393	NP_667219.1	ILMN_1237487	005420025	S	607	GGAGGACTCATCTTTATTATTCCATTCCTCCTAATTGTTATATCCTATGC	11	-	73660969-73661018	11qB4	Mus musculus olfactory receptor 393 (Olfr393), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-360H16.1; MOR135-7	RP23-360H16.1; MOR135-7
Mus musculus	RefSeq	ILMN_214010	ILMN_214010	NRF1	NM_010938.3	NM_010938.3		18181	141802408	NM_010938.3	Nrf1	NP_035068.2	ILMN_1251184	002190554	S	3145	CCTTCCTGCCAGCCCTCTCCCGTGCGTGATAGTGTATTTAATGTGGTGTT	6	+	30103019-30103068	6qA3.3	Mus musculus nuclear respiratory factor 1 (Nrf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	D6Ertd415e; C87038	D6Ertd415e; C87038
Mus musculus	RefSeq	ILMN_185786	ILMN_255983	GDA	NM_010266.2	NM_010266.2		14544	87299644	NM_010266.2	Gda	NP_034396.1	ILMN_2746947	005560482	S	3079	CTGTTCTCTATGCTAACTCAGCAGTAACTTGTCCAGATCTATTTTCCTGG	19	-	21468085-21468134	19qB	Mus musculus guanine deaminase (Gda), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: guanine + H2O = xanthine + NH3 [goid 8892] [evidence IEA]	AU015411; AW047581	AU015411; AW047581
Mus musculus	RefSeq	ILMN_213002	ILMN_213002	RPL31	NM_053257.2	NM_053257.2		114641	142347404	NM_053257.2	Rpl31	NP_444487.1	ILMN_1221124	006840035	S	851	TTCCAGCCATCTTTGCCAACCAGTAGCTCATCTCTGGGATGTGTCTGCCC	1	+	39428635-39428684	1qB	Mus musculus ribosomal protein L31 (Rpl31), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC106651; MGC107628	MGC106651; MGC107628
Mus musculus	MEEBO	ILMN_208904	ILMN_208904	BCL2L11	scl20316.6_256	NM_009754.2			46592752	NM_009754.2	Bcl2l11		ILMN_2590638	001780735	S	3727	CTGCTTTGGCTTCTGGCATTCAGTGCTTGGGTTCTGCCGCCTTTCTGATG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence IDA]	The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IMP]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Creation of the central hole of a tube in an anatomical structure through which gases and/or liquids flow [goid 35148] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IGI]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211992	ILMN_211992	NID2	NM_008695.2	NM_008695.2		18074	84370360	NM_008695.2	Nid2	NP_032721.2	ILMN_2961933	006370035	S	4194	GGACAGTGGCCAGTTTACTGATGAGTTTCTCCCTGAGCAGCGGTCTCATC	14	+	20630200-20630249	14qA3	Mus musculus nidogen 2 (Nid2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IPI]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IPI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW547149; Ly111; nidogen-2; NID-2; entactin-2	AW547149; Ly111; nidogen-2; NID-2; entactin-2
Mus musculus	RefSeq	ILMN_217102	ILMN_217102	NRAP	NM_198059.2	NM_198059.2		18175	117606371	NM_198059.2	Nrap	NP_932307.2	ILMN_1235070	003990609	S	5221	AGAAGACTCTGCTGATGTGAGCCTCCTTAAGAAGCCCCCTTGAGGGCTGC	19	-	56394654-56394684:56394685-56394703	19qD2	Mus musculus nebulin-related anchoring protein (Nrap), transcript variant 1, mRNA.	The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]; Terminal anchorage site of skeletal muscle cells to tendons; a specialised type of contact between the cell and the extracellular matrix in skeletal muscle [goid 5927] [evidence IDA]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]	Interacting selectively with muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc [goid 51371] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane [goid 17166] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211947	ILMN_211947	CAPS2	NM_178278.3	NM_178278.3		353025	142361438	NM_178278.3	Caps2	NP_840062.1	ILMN_2621047	000870168	S	1996	GTTTCCAAAGTGGAGTCTAGAAAGGCCAATTTGGAAATAGATGTGTGCTT	10	+	111652769-111652818	10qD2	Mus musculus calcyphosphine 2 (Caps2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	D630005B03Rik	D630005B03Rik
Mus musculus	RefSeq	ILMN_200588	ILMN_200588	LOC384362	XM_357599.1	XM_357599.1			38083973	XM_357599.1	LOC384362		ILMN_1231306	001400626	S	187	GCTGTCACTCTGGGAGCTGCTGTCACTCAGGGAGCTGTTGTCACTCAGGA										
Mus musculus	MEEBO	ILMN_196179	ILMN_196179	RASIP1	scl073456.9_93				51746066	XM_485931	Rasip1		ILMN_1245441	003800170	S	3	GCTCATACCTACAGTCGCTCAAAATCCAGAGAAAAAAATGAAAACTCGCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [evidence ISA]		
Mus musculus	MEEBO	ILMN_194287	ILMN_194287	A730063M14RIK	scl0320368.1_79						A730063M14Rik		ILMN_2505061	005290441	S	19	GTGCTGGATCAGGCTTGGCACATGACGCAAAGTGGGGGCGAGTCTGGAAT										
Mus musculus	RefSeq	ILMN_221698	ILMN_221698	ACAD10	NM_028037.1	NM_028037.1		71985	30794395	NM_028037.1	Acad10	NP_082313.1	ILMN_2821158	005570379	S	3615	GATGCAGGAACCAGCAGTGCCCAGAGTGTAGATGCTGAGTTTGGCATGGT	5	-	121881804-121881825:121881826-121881853	5qF	Mus musculus acyl-Coenzyme A dehydrogenase family, member 10 (Acad10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	2410021P16Rik	2410021P16Rik
Mus musculus	RefSeq	ILMN_199420	ILMN_199420	OLFR495	NM_146364.1	NM_146364.1		258361	22129570	NM_146364.1	Olfr495	NP_666476.1	ILMN_2675615	007560546	S	291	CATTGGATGTTCTATACAGTTTACCTCAGCTGTTTTCCTTGCGACAGTTG	7	+	115538926-115538975	7qE3	Mus musculus olfactory receptor 495 (Olfr495), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-37	MOR204-37
Mus musculus	RefSeq	ILMN_199420	ILMN_199420	OLFR495	NM_146364.1	NM_146364.1		258361	22129570	NM_146364.1	Olfr495	NP_666476.1	ILMN_2938793	002060288	S	550	TTGGCTCCTTTGGTGGAACTCTCCTGTTCTGATGTCACTCTCGCTGTTGT	7	+	115539185-115539234	7qE3	Mus musculus olfactory receptor 495 (Olfr495), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-37	MOR204-37
Mus musculus	RefSeq	ILMN_220564	ILMN_311289	LOC100046641	XM_001476658.1	XM_001476658.1		100046641	149240742	XM_001476658.1	LOC100046641	XP_001476708.1	ILMN_2723803	001410079	S	1238	GTGGCAGAGTCTATTGCCCTTGAATCTACTCTGGCTTTTGAGGGGTTTAG					PREDICTED: Mus musculus similar to serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 12 (LOC100046641), mRNA.					
Mus musculus	MEEBO	ILMN_191898	ILMN_191898	4930533L02RIK	scl32073.1.2_35						4930533L02Rik		ILMN_2483181	007100201	S	9	AGCCCCCAGCTGTTTAAGCCCTGTGTTTGGAAGTAGCTTGCTACGCAGCA										
Mus musculus	RefSeq	ILMN_215959	ILMN_215959	SERINC2	NM_172702.1	NM_172702.1		230779	27370015	NM_172702.1	Serinc2	NP_766290.1	ILMN_2826264	007650068	S	1630	CTCAGGGTCTCCAGAAGAGGGCATGAGAGTAGAGAGTGGCCCAGAGCTTC	4	-	129755964-129756013	4qD2.2	Mus musculus serine incorporator 2 (Serinc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			TDE2; FKSG84; AW121759; 2310004K20Rik; Tde2l	TDE2; FKSG84; AW121759; 2310004K20Rik; Tde2l
Mus musculus	RefSeq	ILMN_215097	ILMN_215097	NXF2	NM_031259.1	NM_031259.1		83454	13752590	NM_031259.1	Nxf2	NP_112549.1	ILMN_2655484	005290593	S	2191	CATCCACATTATTTCCCTTTATAAGGCCTTTCCCACACCTGGGAATAGAG	X	-	131479201-131479250	XqE3	Mus musculus nuclear RNA export factor 2 (Nxf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISO]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	The directed movement of RNA from the nucleus to the cytoplasm [goid 6405] [evidence ISO]; The directed movement of RNA from the nucleus to the cytoplasm [goid 6405] [evidence IDA]; The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm [goid 16973] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]	Nxf-b; 4930455N06Rik	Nxf-b; 4930455N06Rik
Mus musculus	RefSeq	ILMN_215258	ILMN_215258	MTHFR	NM_010840.2	NM_010840.2		17769	31543270	NM_010840.2	Mthfr	NP_034970.2	ILMN_2657280	006350593	S	5931	GTCTGAAGGTGACTTTTTGGTACAGAAAAGAGAAAAACCCAAATTTCTAC	4	+	147433550-147433599	4qE2	Mus musculus 5,10-methylenetetrahydrofolate reductase (Mthfr), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 6555] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IMP]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 5-methyltetrahydrofolate + NAD(P)+ = 5,10-methylenetetrahydrofolate + NAD(P)H + H+ [goid 4489] [evidence IMP]	AI323986	AI323986
Mus musculus	RefSeq	ILMN_213574	ILMN_253940	RAB11FIP3	XM_484616.4	XM_484616.4		215445	149268694	XM_484616.4	Rab11fip3	XP_484616.1	ILMN_2638520	002690064	S	5189	GGAGACCCTGGGAAACACACCAATCACCAACTTGCTCATGACATTGCTTC	17	-	26126088-26126137	17qA3.3	PREDICTED: Mus musculus RAB11 family interacting protein 3 (class II), transcript variant 1 (Rab11fip3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_186135	ILMN_253940	RAB11FIP3	XM_484616.4	XM_484616.4		215445	149268694	XM_484616.4	Rab11fip3	XP_484616.1	ILMN_1248291	002680403	S	2494	GTGCGACGTCCTCACTGACGAGGCCTTTGAGTTTTACTGTAGCCAGTGCC	17	-	26149002-26149051	17qA3.3	PREDICTED: Mus musculus RAB11 family interacting protein 3 (class II), transcript variant 1 (Rab11fip3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_206803	ILMN_253940	RAB11FIP3	XM_484616.4	XM_484616.4		215445	149268694	XM_484616.4	Rab11fip3	XP_484616.1	ILMN_1227748	004010468	S	1885	CGAGGATTTCATCCAATTCGCCACGGTCTATGGGGCAGAGCAGGTGAAGG	17	-	26173620-26173627:26204527-26204568	17qA3.3	PREDICTED: Mus musculus RAB11 family interacting protein 3 (class II), transcript variant 1 (Rab11fip3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_224113	ILMN_224113	BC030335	scl30738.5_213				27734155	NM_173408	BC030335		ILMN_2775022	001570270	S	2391	TCAAGCTCGGTTGGGGTAACGTGGTGACTGTTTAGGTTTACATGACCCTC										
Mus musculus	RefSeq	ILMN_216688	ILMN_216688	2310033P09RIK	NM_024210.2	NM_024210.2		67862	118129814	NM_024210.2	2310033P09Rik	NP_077172.1	ILMN_2751887	002480731	S	817	CCCGCAGACGACAAGACAGAAGCTCTGATGACTGAGAATGGCTACACCAA	11	+	59023812-59023846:59023847-59023861	11qB1.3	Mus musculus RIKEN cDNA 2310033P09 gene (2310033P09Rik), mRNA.				RP23-192P17.3; MGC7354	RP23-192P17.3; MGC7354
Mus musculus	RefSeq	ILMN_216688	ILMN_216688	2310033P09RIK	NM_024210.2	NM_024210.2		67862	118129814	NM_024210.2	2310033P09Rik	NP_077172.1	ILMN_1232120	004900070	S	372	ATCTGCAAACGGGAAGGAGGAGACCCCGAGGAGAAGGGCGTGGACCGGCT	11	+	59022483-59022532	11qB1.3	Mus musculus RIKEN cDNA 2310033P09 gene (2310033P09Rik), mRNA.				RP23-192P17.3; MGC7354	RP23-192P17.3; MGC7354
Mus musculus	RefSeq	ILMN_210667	ILMN_257851	9130221H12RIK	NM_178400.2	NM_178400.2		77124	31341578	NM_178400.2	9130221H12Rik	NP_848487.1	ILMN_2607972	000070243	S	1236	TTGAACACCTGTGGGTTGATTCAGAGGTGAGAGGCGCAGTGACACTCTGT	7	+	26015047-26015096	7qA3	Mus musculus RIKEN cDNA 9130221H12 gene (9130221H12Rik), mRNA.				AU016887	AU016887
Mus musculus	RefSeq	ILMN_209608	ILMN_209608	CRIP3	NM_181664.2	NM_181664.2		114570	133892348	NM_181664.2	Crip3	NP_858050.1	ILMN_2597432	005050349	S	591	CATCTATGACCCAGTGGACATAAGATCCAAATGAGCCATTCGCAGGAGTG	17	+	46568356-46568389:46568390-46568405	17qC	Mus musculus cysteine-rich protein 3 (Crip3), transcript variant TLP-A, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	TLP-A; TLP; Tlmp; TLP-B	TLP-A; TLP; Tlmp; TLP-B
Mus musculus	RefSeq	ILMN_210213	ILMN_210213	HSD17B1	NM_010475.1	NM_010475.1		15485	6754247	NM_010475.1	Hsd17b1	NP_034605.1	ILMN_2997763	004590064	S	1233	AGTGCCAGCATCTTCATGGGTCAAGATAAGAGGGCTGATATCCAAGGTGC	11	+	100941735-100941784	11qD	Mus musculus hydroxysteroid (17-beta) dehydrogenase 1 (Hsd17b1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 6703] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	17HSDB1; Hsd17ba; E2DH; 17beta-HSD	17HSDB1; Hsd17ba; E2DH; 17beta-HSD
Mus musculus	RefSeq	ILMN_250485	ILMN_250485	E130009J12RIK	NM_001008973.2	NM_001008973.2		381107	113374161	NM_001008973.2	E130009J12Rik	NP_001008973.2	ILMN_2985193	004490113	S	2002	GGAGGCCCGAAAGCGAGAAGAGGAAGCATATAAGGCCCAAAATCAGAAGG	17	-	65605881-65605930	17qE1.1	Mus musculus RIKEN cDNA E130009J12 gene (E130009J12Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tes13-L; Gm940; Tes13-S	Tes13-L; Gm940; Tes13-S
Mus musculus	RefSeq	ILMN_211308	ILMN_211308	DMRTA2	NM_172296.2	NM_172296.2		242620	112821684	NM_172296.2	Dmrta2	NP_758500.2	ILMN_1243528	001410653	S	2870	GCGACGCTGCGCACAGCTGCTCACTTTGTGCTTTCCTTTGCATAGGTATG	4	+	109656212-109656261	4qC7	Mus musculus doublesex and mab-3 related transcription factor like family A2 (Dmrta2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Dmrt5	Dmrt5
Mus musculus	MEEBO	ILMN_193385	ILMN_193385	A130086G11RIK	scl39836.1_600						A130086G11Rik		ILMN_2496658	006840181	S	10	CCTGTGGCTAAATAGCACCAACTTCGAGGCCCTCACGGAACTCACCTCTG										
Mus musculus	MEEBO	ILMN_185313	ILMN_185313	4933421G18RIK	scl0071175.1_302				49169844	NM_027707	4933421G18Rik		ILMN_2425990	002490180	S	17	TGTCTGGTCTAATTTTGTGTGCCCTTTCTAATATCTGCGCTGTTGGCCGT										
Mus musculus	RefSeq	ILMN_218185	ILMN_218185	KLRK1	NM_033078.3	NM_033078.3		27007	134023659	NM_033078.3	Klrk1	NP_149069.1	ILMN_1226816	005570204	S	743	CACAGAAGACTGTGCAAATCTAAACACGTACATCTGCATGAAAAGGGCGG	6	-	129562808-129562857	6qF3	Mus musculus killer cell lectin-like receptor subfamily K, member 1 (Klrk1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [evidence IMP]; The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity [goid 45954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]; Any series of molecular signals generated as a consequence of binding to a C-type lectin receptor capable of cellular activation [goid 2223] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [evidence IPI]; Combining with an MHC class Ib protein complex to initiate a change in cellular activity. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families [goid 32394] [evidence IMP]	D6H12S2489E; NKG2-D; Nkg2d	D6H12S2489E; NKG2-D; Nkg2d
Mus musculus	RefSeq	ILMN_218185	ILMN_218185	KLRK1	NM_033078.3	NM_033078.3		27007	134023659	NM_033078.3	Klrk1	NP_149069.1	ILMN_2692703	004290014	S	1174	CCTCTAGAGAGTCTAGACTCTATTTTTGTAGTGGTCACCGAGGCCTGAGG	6	-	129562377-129562426	6qF3	Mus musculus killer cell lectin-like receptor subfamily K, member 1 (Klrk1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [evidence IMP]; The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity [goid 45954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]; Any series of molecular signals generated as a consequence of binding to a C-type lectin receptor capable of cellular activation [goid 2223] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [evidence IPI]; Combining with an MHC class Ib protein complex to initiate a change in cellular activity. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families [goid 32394] [evidence IMP]	D6H12S2489E; NKG2-D; Nkg2d	D6H12S2489E; NKG2-D; Nkg2d
Mus musculus	Riken	ILMN_201967	ILMN_201967	ARAF	ri|1200013E08|R000009G20|AK004741|2846					AK004741	Araf		ILMN_1216083	003360403	S	2545	AATTCATGGGAGGTGGAGGCAAGACGATCAATAGTTCAAGGCTACCCTCC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA];  [goid 5057] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200122	ILMN_200122	LOC384226	XM_357503.1	XM_357503.1			38080502	XM_357503.1	LOC384226		ILMN_1227702	005870484	S	28	ATGCCTGGGGCGTCTTTGGGCGACTACAGCAGTGGCACACGCTGCCAGTT										
Mus musculus	Riken	ILMN_203594	ILMN_203594	RPO1-4	ri|6030490M24|PX00058J03|AK031689|3396					AK031689	Rpo1-4		ILMN_1230860	003450484	S	3211	CATGGAGATGCCCACTGTGATACTAGGGCCAGCAAAGTGCTTACAGTAGG										
Mus musculus	Riken	ILMN_207305	ILMN_207305	4732489I21RIK	ri|4732489I21|PX00637P14|AK076392|4364					AK076392	4732489I21Rik		ILMN_1216287	001470279	S	3631	GCAGAAGCTCTGGTTTGGAGAGAGCCCCTGTTGAAAAGCTGTGATCCTTG										
Mus musculus	RefSeq	ILMN_212633	ILMN_212633	MRPL49	NM_026246.1	NM_026246.1		18120	13385751	NM_026246.1	Mrpl49	NP_080522.1	ILMN_2929031	000540681	S	1466	GTTCAGAACCTGCCTACCCTGTGTGACCTCAGACCTAAGGTAGCTAGCGG	19	-	6053836-6053885	19qA	Mus musculus mitochondrial ribosomal protein L49 (Mrpl49), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	Nof1; 4833419D18Rik	Nof1; 4833419D18Rik
Mus musculus	RefSeq	ILMN_197372	ILMN_197372	LOC238730	XM_138727.2	XM_138727.2			38075391	XM_138727.2	LOC238730		ILMN_1245689	000380113	S	2958	CATGGTATACTGACCAGCTGAGAGTCAGGGTGGAGGCTAGTGATGAGAGG										
Mus musculus	RefSeq	ILMN_209061	ILMN_209061	MUP4	NM_008648.1	NM_008648.1		17843	6678967	NM_008648.1	Mup4	NP_032674.1	ILMN_2728666	003060278	S	519	AAAACTTTGTGAGGAGCATGGAATCATTAAAGAAAATATCATTGACTTAA	4	-	59970936-59970985	4qB3	Mus musculus major urinary protein 4 (Mup4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Mup-4	Mup-4
Mus musculus	RefSeq	ILMN_209061	ILMN_209061	MUP4	NM_008648.1	NM_008648.1		17843	6678967	NM_008648.1	Mup4	NP_032674.1	ILMN_2592166	002230678	S	553	AATATCATTGACTTAACCAAAACCAATCGCTGCCTCAAGGCCCGAGAATG	4	-	59970737-59970762:59970928-59970951	4qB3	Mus musculus major urinary protein 4 (Mup4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Mup-4	Mup-4
Mus musculus	Riken	ILMN_204219	ILMN_204219	A730058H24RIK	ri|A730058H24|PX00150L14|AK043126|2190					AK043126	A730058H24Rik		ILMN_1236864	004730689	S	1910	TTGTGCAGTTAAGATGGGCCAGCAGACATGGGAAAAAACATAGGGCCTCC										
Mus musculus	RefSeq	ILMN_214514	ILMN_214514	RHOBTB3	NM_028493.2	NM_028493.2		73296	133892620	NM_028493.2	Rhobtb3	NP_082769.1	ILMN_1221243	006350632	S	4613	GGCATGGTAGCTGAAGCCCACTCCTGTGCAAGCCATACTGGAACTTCATA	13	-	76007259-76007308	13qC1	Mus musculus Rho-related BTB domain containing 3 (Rhobtb3), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW208826; 4930503C18Rik; 2610033K01Rik; mKIAA0878; AI317148; 1700040C17Rik	AW208826; 4930503C18Rik; 2610033K01Rik; mKIAA0878; AI317148; 1700040C17Rik
Mus musculus	Riken	ILMN_202507	ILMN_202507	1700086G18RIK	ri|1700086G18|ZX00076H18|AK007018|983					AK007018	1700086G18Rik		ILMN_1221589	004560577	S	816	GATGTGGGGGGAGGGGTGCGTGGTAGTGGTGGTTCTTGTTGTAATCCTGC										
Mus musculus	RefSeq	ILMN_192212	ILMN_239287	RAPGEF5	NM_175930.4	NM_175930.4		217944	141802209	NM_175930.4	Rapgef5	NP_787126.2	ILMN_2674602	002260553	S	3433	GTCACCTTACTGCTGATTGGCTGTCTGCTCACCTTATTGCCAATTGGCTG	12	+	118994897-118994946	12qF2	Mus musculus Rap guanine nucleotide exchange factor (GEF) 5 (Rapgef5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	4932413M22; C86120; D030051B22Rik; GFR; Mrgef; mKIAA0277; mmr-gef	4932413M22; C86120; D030051B22Rik; GFR; Mrgef; mKIAA0277; mmr-gef
Mus musculus	RefSeq	ILMN_198445	ILMN_251040	LOC628994	XR_002686.1	XR_002686.1		628994	94406784	XR_002686.1	LOC628994		ILMN_1258255	004560017	S	282	CCATGGTGGACAGGCTTACACCCTTAGTTAGGAACTGGGCGTTTACGACC				19qC3	PREDICTED: Mus musculus similar to ribosomal protein L15 (LOC628994), mRNA.					
Mus musculus	RefSeq	ILMN_224214	ILMN_249201	9330167E06	XM_988947.1	XM_988947.1		328399	94397065	XM_988947.1	9330167E06	XP_994041.1	ILMN_2776710	003520202	S	1525	CCTGTGCGGTTATCCCCTATGCAGTTATACCAGGATATGTCTGACCTGGG	14	-	49817856-49817905		PREDICTED: Mus musculus hypothetical protein 9330167E06 (9330167E06), mRNA.					
Mus musculus	RefSeq	ILMN_215427	ILMN_215427	RCAN1	NM_019466.3	NM_019466.3		54720	125656174	NM_019466.3	Rcan1	NP_062339.2	ILMN_1259180	005700019	S	52	GAGAGCGAGTCGTTCGTTAAGCGTCTGCCCCGTGAAAAAGCAGAATGCAT	16	-	92400221-92400227:92400228-92400270	16qC4	Mus musculus regulator of calcineurin 1 (Rcan1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IEA]; Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [evidence IDA]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IDA]		MCIP1; Dscr1; CALP1L; AA408855; DSC1; CSP1; AL024459; Adapt78; RCN1; AV028423; 2410048A02Rik; AI429645	MCIP1; Dscr1; CALP1L; AA408855; DSC1; CSP1; AL024459; Adapt78; RCN1; AV028423; 2410048A02Rik; AI429645
Mus musculus	MEEBO	ILMN_186980	ILMN_186980	USMG3	scl26168.1.495_191						Usmg3		ILMN_2440125	007610368	S	6	AACCAACCGCGTCCTGCTCACTGCCAACACGGCTGGACACAGTCATTACA										
Mus musculus	RefSeq	ILMN_198227	ILMN_198227	LOC268939	XM_110186.2	XM_110186.2			38082992	XM_110186.2	LOC268939		ILMN_1215666	001710537	S	10489	CCGATGCTGTACACGGTGGCATTTCTGCACTCCACCGTGCAGGTAACCTG										
Mus musculus	Riken	ILMN_204067	ILMN_204067	A630091F01RIK	ri|A630091F01|PX00148B15|AK042432|609					AK042432	A630091F01Rik		ILMN_2562109	004670170	S	64	CGACGCCTGCTGCGAGATGGCGATCTTGGGCGCGGAGGGCTGAGGAGGCG										
Mus musculus	RefSeq	ILMN_236152	ILMN_236152	PLA1A	NM_134102.2	NM_134102.2		85031	31982574	NM_134102.2	Pla1a	NP_598863.2	ILMN_2974343	004210372	S	1650	TATGCAGGAGGCAGTGGCCGCAGTTTTCCGAGGGCAGTGTGCCAAGAGCT	16	-	38315630-38315679	16qB4	Mus musculus phospholipase A1 member A (Pla1a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Ps-pla1; Pspla1; AA986889	Ps-pla1; Pspla1; AA986889
Mus musculus	RefSeq	ILMN_195734	ILMN_195734	TNK1	NM_031880.2	NM_031880.2		83813	31560012	NM_031880.2	Tnk1	NP_114086.2	ILMN_2518197	005490301	S	2496	CCGTCGGAACTGTCATTAGCTACTTCCCTAAACTCTATGGGGCACCCAAC	11	-	69664726-69664775	11qB3	Mus musculus tyrosine kinase, non-receptor, 1 (Tnk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IMP]	Kos1	Kos1
Mus musculus	MEEBO	ILMN_216814	ILMN_216814	BC018371	scl0264895.2_92	NM_153807.1			24418932	NM_153807.1	BC018371		ILMN_2675674	000780551	S	2758	TACATAAGCACCCTTCCCTGGCCTGCACTCCCGGCCCAATAATTATTGTT										
Mus musculus	RefSeq	ILMN_198929	ILMN_198929	LOC235316	XM_146909.2	XM_146909.2			38089822	XM_146909.2	LOC235316		ILMN_2533426	005890474	S	428	AGCTTGTGGGCAGCAGAGGTGATGCTGAGCTTGTGGGCAGCAGAGGAGAT										
Mus musculus	MEEBO	ILMN_224199	ILMN_224199	1700011J10RIK	scl20781.3.23_109				34304049	NM_183265	1700011J10Rik		ILMN_1247972	004920504	S	379	GCCCTGTGGAAATCTTTTGAAGAAGATGGACTCACATGAGCACAAGTTCA										
Mus musculus	MEEBO	ILMN_196117	ILMN_196117	HOXC4	scl47448.2_4				7305148	NM_013553	Hoxc4		ILMN_2521794	001850136	S	11	TGTATTCTTGTGGGGGGGTGGAAGGAGGGGGGAGGACAGCAAACAAAGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48562] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_188774	ILMN_244291	ADAMTS18	NM_172466.2	NM_172466.2		208936	121583652	NM_172466.2	Adamts18	NP_766054.2	ILMN_2455596	005130711	S	4764	ATGCCTTTCATGCGACATCAACCTCGTAACTTGGTGCTTATTCCCTGCTC	8	-	116222078-116222127	8qE1	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 (Adamts18), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	ADAMTS21; 9630038L21; E130314N14Rik	ADAMTS21; 9630038L21; E130314N14Rik
Mus musculus	Riken	ILMN_204738	ILMN_204738	B930035C03RIK	ri|B930035C03|PX00164A01|AK047200|2987					AK047200	B930035C03Rik		ILMN_1249856	002030010	S	2463	GGTCTCCACATGGAATGCTTCTTCCCAGCAACAGCACTCTGGGGACAGTC										
Mus musculus	RefSeq	ILMN_200478	ILMN_239514	LOC545208	XM_912102.2	XM_912102.2		545208	94402964	XM_912102.2	LOC545208	XP_917195.1	ILMN_1246590	004120519	S	34	TTGGTAAAAGAACAACCCAGAGTCGCTCGTCTCCGTGGCTTCTCCGAGGC				17qC	PREDICTED: Mus musculus similar to protein associated with MRG, 14 kDa (LOC545208), mRNA.					
Mus musculus	RefSeq	ILMN_215561	ILMN_215561	TSPAN10	NM_145363.1	NM_145363.1		208634	21703723	NM_145363.1	Tspan10	NP_663338.1	ILMN_2661035	004760360	S	1505	GGTCTTCGGTAAGAATTAGGGTAATGCCCAGGGTGGACTTGCCCTGTGGA	11	+	120308138-120308187	11qE2	Mus musculus tetraspanin 10 (Tspan10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Ocsp	Ocsp
Mus musculus	Riken	ILMN_203690	ILMN_203690	9530073A13RIK	ri|9530073A13|PX00114K21|AK035591|3548					AK035591	9530073A13Rik		ILMN_1224964	000020360	S	3478	GCAGCCGCTCCAGGAAGAACACGGCATATAGGAGCCATCTTTCCACAGAT										
Mus musculus	RefSeq	ILMN_230036	ILMN_230036	NAIP7	NM_021545.1	NM_021545.1		53880	58866049	NM_021545.1	Naip7	NP_067520.1	ILMN_2868260	006900070	S	4595	GGAGTACCCATTCTTTGCCATTGTCTTCCCATAGTTCTGACAGGGTCACT	13	-	101383570-101383619		Mus musculus NLR family, apoptosis inhibitory protein 7 (Naip7), mRNA.				Naip6; Naip-rs4B; Birc1g; Naip7	Naip6; Naip-rs4B; Birc1g; Naip7
Mus musculus	RefSeq	ILMN_186908	ILMN_230036	NAIP7	NM_021545.1	NM_021545.1		53880	58866049	NM_021545.1	Naip7	NP_067520.1	ILMN_1257705	003170382	S	4497	CATTTAGGATAATGATGTGGGAGAGTCAAGGTTAAACACAGTCTGAAGTG	13	-	101383668-101383717		Mus musculus NLR family, apoptosis inhibitory protein 7 (Naip7), mRNA.				Naip6; Naip-rs4B; Birc1g; Naip7	Naip6; Naip-rs4B; Birc1g; Naip7
Mus musculus	RefSeq	ILMN_221401	ILMN_221401	OLFR611	NM_146727.1	NM_146727.1		258722	22129382	NM_146727.1	Olfr611	NP_666938.1	ILMN_2735070	001580348	S	456	CGAACCTTAACTCTGCAGGTGCCTGCCCCTATCCTCTTGAGGAGGCTCTA	7	-	110666391-110666440	7qE3	Mus musculus olfactory receptor 611 (Olfr611), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR15-4; MOR15-1	MOR15-4; MOR15-1
Mus musculus	RefSeq	ILMN_221401	ILMN_221401	OLFR611	NM_146727.1	NM_146727.1		258722	22129382	NM_146727.1	Olfr611	NP_666938.1	ILMN_1253092	004880041	S	584	CTGTCAACAGTATCTTTGGACTCTTTGTGGTGCTCTCTACCTTGGGACTT	7	-	110666263-110666312	7qE3	Mus musculus olfactory receptor 611 (Olfr611), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR15-4; MOR15-1	MOR15-4; MOR15-1
Mus musculus	RefSeq	ILMN_221401	ILMN_221401	OLFR611	NM_146727.1	NM_146727.1		258722	22129382	NM_146727.1	Olfr611	NP_666938.1	ILMN_2937158	001110674	S	585	TGTCAACAGTATCTTTGGACTCTTTGTGGTGCTCTCCACCTTGGGACTTG	7	-	110666262-110666311	7qE3	Mus musculus olfactory receptor 611 (Olfr611), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR15-4; MOR15-1	MOR15-4; MOR15-1
Mus musculus	MEEBO	ILMN_189601	ILMN_189601	TBC1D17	scl31405.16_368				21450326	NM_144924	Tbc1d17		ILMN_2462697	002750368	S	9	GTAGCCAGCCCCGCCCACTCACCTCCCTCGGGAATTAAAAGTGCTTTCCT						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215171	ILMN_215171	DDX50	NM_053183.1	NM_053183.1		94213	16716474	NM_053183.1	Ddx50	NP_444413.1	ILMN_2957605	001260326	S	2255	CGATCAAGAAGTGGGGGCCATAAACGGAATTTTGACTGAGTGTTTGATAG	10	-	62011582-62011594:62011595-62011631	10qB4	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 (Ddx50), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4933429B04Rik; RH-II; GU2	4933429B04Rik; RH-II; GU2
Mus musculus	RefSeq	ILMN_219882	ILMN_219882	FOLH1	NM_016770.2	NM_016770.2		53320	31980799	NM_016770.2	Folh1	NP_058050.2	ILMN_2714749	006220382	S	2875	CATGTACTTCTAAACAATTGCATCATTTATATCAAATATAATCCTGGTCT	7	-	93867575-93867624	7qD3	Mus musculus folate hydrolase (Folh1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving folic acid and its derivatives [goid 6760] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC141397; mopsm	MGC141397; mopsm
Mus musculus	Riken	ILMN_204396	ILMN_204396	BCAT2	ri|A130021A04|PX00121J18|AK037482|1907					AK037482	Bcat2		ILMN_2564659	005720437	S	1470	CACATCTCCTCAGTAGGCTGAGGCAGGAAGGCTTCAAAGAAAGTTGTGGG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9082] [evidence IEA]; The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9081] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9083] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid. Includes catalysis of the reaction: L-leucine + 2-oxoglutarate = 4-methyl-2-oxopentanoate + L-glutamate and anaologous reactions involving L-isoleucine and L-valine [goid 4084] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212266	ILMN_212266	CEP135	NM_199032.2	NM_199032.2		381644	142373055	NM_199032.2	Cep135	NP_950197.1	ILMN_2624574	005310048	S	5175	CCTTTGCAATAATTTGCTGCATAGTTGAGTACAGGGCGACTTACTCTCCC	5	+	77075352-77075401	5qC3.3	Mus musculus centrosomal protein 135 (Cep135), mRNA.				Cep4; Gm1044; MGC86039; BC062951	Cep4; Gm1044; MGC86039; BC062951
Mus musculus	Riken	ILMN_204099	ILMN_204099	A230044L11RIK	ri|A230044L11|PX00127N05|AK038570|2166					AK038570	A230044L11Rik		ILMN_1259705	007560079	S	1845	GACTCTCCCATTGAGGGGTTGTGGAGTGTGGGTAAGCTGTAGACCTCCTG										
Mus musculus	RefSeq	ILMN_186811	ILMN_318199	LOC100048365	XM_001480092.1	XM_001480092.1		100048365	149267985	XM_001480092.1	LOC100048365	XP_001480142.1	ILMN_2438697	002070463	S	590	GGCATCCATTTATGACCAGCATCCACTATCAATACCATCTGTATTCAGCT					PREDICTED: Mus musculus similar to keratin associated protein 6-1 (LOC100048365), mRNA.					
Mus musculus	RefSeq	ILMN_210751	ILMN_210751	GLP1R	NM_021332.2	NM_021332.2		14652	111378378	NM_021332.2	Glp1r	NP_067307.2	ILMN_2608776	006270706	S	1297	AGACTGCAGCATGAAGCCCCTCAAGTGTCCCACCAGCAGCGTCAGCAGTG	17	+	31073272-31073321	17qA3.3	Mus musculus glucagon-like peptide 1 receptor (Glp1r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA]; Combining with glucagon to initiate a change in cell activity [goid 4967] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence TAS]	GLP-1R	GLP-1R
Mus musculus	RefSeq	ILMN_211829	ILMN_211829	QRICH1	NM_175143.2	NM_175143.2		69232	31341024	NM_175143.2	Qrich1	NP_780352.1	ILMN_2902625	001430487	S	2038	GGAGGGGGTCTGATCTCCTGAAACTGGAGTTAGAGAACTGTGAGCTGCCG	9	+	108403170-108403219	9qF2	Mus musculus glutamine-rich 1 (Qrich1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2610028H07Rik	2610028H07Rik
Mus musculus	RefSeq	ILMN_219597	ILMN_258573	4930534P07RIK	XM_906050.2	XM_906050.2		75829	94408187	XM_906050.2	4930534P07Rik	XP_911143.1	ILMN_1215583	002360441	S	2183	CTTTTCTCGAGCTTCAAGAATCTGATGTAAGAATTCGTACGTTATAGACG				XqF1	PREDICTED: Mus musculus RIKEN cDNA 4930534P07 gene (4930534P07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219405	ILMN_219405	GPR27	NM_008158.1	NM_008158.1		14761	6680072	NM_008158.1	Gpr27	NP_032184.1	ILMN_3070992	006200253	I	92	TGCTGTGCGTGAGCCTGGCGGGCAACGTGCTGTTCGCGCTGCTCATCGTG	6	+	99642764-99642813	6qD3	Mus musculus G protein-coupled receptor 27 (Gpr27), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219405	ILMN_219405	GPR27	NM_008158.1	NM_008158.1		14761	6680072	NM_008158.1	Gpr27	NP_032184.1	ILMN_3149700	000610288	A	1030	CTCTTCAACCGGGAGCTGAGGGACTGTTTCCGAGCCCAGTTTCCCTGCTG	6	+	99643702-99643751	6qD3	Mus musculus G protein-coupled receptor 27 (Gpr27), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219405	ILMN_219405	GPR27	NM_008158.1	NM_008158.1		14761	6680072	NM_008158.1	Gpr27	NP_032184.1	ILMN_2708377	002900608	S	1012	AACCCCGTGGTGTGTTTCCTCTTCAACCGGGAGCTGAGGGACTGTTTCCG	6	+	99643684-99643733	6qD3	Mus musculus G protein-coupled receptor 27 (Gpr27), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]		
Mus musculus	MEEBO	ILMN_218052	ILMN_218052	9230107M04RIK	scl31742.5.1_48				51763635	XM_486054	9230107M04Rik		ILMN_2690952	003870687	S	451	CCAAATGTAATTAATCCTTTATCTTTATGGAGAAATCTGTTAATAAACTT										
Mus musculus	MEEBO	ILMN_208861	ILMN_208861	CYP2C65	scl069888.8_37	XM_129243.3			38085088	XM_129243.3	Cyp2c65		ILMN_1230936	000380112	S	731	CCAGAGTTCTGGGATTCCATATATAGCCCTGCACAAACTGATCTATGTCC							The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216289	ILMN_216289	MGST1	NM_019946.4	NM_019946.4		56615	141802796	NM_019946.4	Mgst1	NP_064330.2	ILMN_2669416	003190438	S	251	CGCTGGCTTTGGCAAGGGAGAGAATGCCAAGAAGTTTGTTCGCACTGACG	6	+	138099312-138099361	6qG1	Mus musculus microsomal glutathione S-transferase 1 (Mgst1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IDA]	Gst; 1500002K10Rik	Gst; 1500002K10Rik
Mus musculus	MEEBO	ILMN_209495	ILMN_209495	DCN	scl38511.3.1_54	NM_007833.1			6681142	NM_007833.1	Dcn		ILMN_2604695	007040228	S	7	GCGCTCACGCAGTGAAACCTTAGTTCTTAACTGTGCTATGGAGTAGAAGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210433	ILMN_210433	SDCCAG3	NM_030155.1	NM_030155.1		68112	21687027	NM_030155.1	Sdccag3	NP_084431.1	ILMN_1223575	006770332	S	1004	GGCAGTTAGTCATATAATGGCTTGATGTAGAATTGCCCTGAAGAGGGGTC	2	-	26208760-26208809	2qA3	Mus musculus serologically defined colon cancer antigen 3 (Sdccag3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C330016H24Rik; C630038K21Rik	C330016H24Rik; C630038K21Rik
Mus musculus	Riken	ILMN_204813	ILMN_204813	NSMAF	ri|C630007J05|PX00083B15|AK049887|2871					AK049887	Nsmaf		ILMN_2567809	000990706	S	2782	ACCCAAAGCTGAAGACAGTGACAAGCTGTCTAGGATGGCCAACAGTGCAC								Interacting selectively with a death receptor [goid 5123] [evidence TAS]		
Mus musculus	RefSeq	ILMN_220169	ILMN_220169	C1D	NM_020558.3	NM_020558.3		57316	142354885	NM_020558.3	C1d	NP_065583.2	ILMN_3160140	002760753	S	2701	AACAACAGGAAGCAAAAGAGGCACTGGCCCTCACAGCAGAGTGACTAAGC	11	+	17168923-17168972	11qA2	Mus musculus nuclear DNA binding protein (C1d), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively, in a ligand dependent manner, with a nuclear receptor protein [goid 16922] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	SUN-CoR; 1110036E10Rik; AI875855	SUN-CoR; 1110036E10Rik; AI875855
Mus musculus	Riken	ILMN_204497	ILMN_204497	CACNB2	ri|B230337K17|PX00160B19|AK046048|3459					AK046048	Cacnb2		ILMN_2565436	006550110	S	3407	GGAACTTGAGAACCAGAGAAATTCTCCTAGCTCTTTCCCATACCCTCAGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]		
Mus musculus	RefSeq	ILMN_200503	ILMN_200503	LOC384328	XM_357574.1	XM_357574.1			38082848	XM_357574.1	LOC384328		ILMN_1259431	004810091	S	249	TGTCAATCCGGGAAGTACTCTGCGTGTGAGTCAGGAGTACCAGTGGGAGG										
Mus musculus	RefSeq	ILMN_189587	ILMN_251481	NARG1	NM_053089.2	NM_053089.2		74838	28269696	NM_053089.2	Narg1	NP_444319.2	ILMN_2462584	004890133	S	188	TCCTCCCGCGGCTCCCGCCACCGCCCGGCTCGCTCAGTCCGTTTGTCCGC	3	+	51220238-51220244:51220245-51220287	3qC	Mus musculus NMDA receptor-regulated gene 1 (Narg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	tubedown; mNAT1; 5730450D16Rik; 6330400I15; Tbdn-1; MGC29428	tubedown; mNAT1; 5730450D16Rik; 6330400I15; Tbdn-1; MGC29428
Mus musculus	RefSeq	ILMN_251481	ILMN_251481	NARG1	NM_053089.2	NM_053089.2		74838	28269696	NM_053089.2	Narg1	NP_444319.2	ILMN_2848090	002490255	S	3729	AGCTAAAACCTCAGCAGGCCTTGTTCACGATATGCAGAAAAGTGCTGCAG	3	+	51277659-51277708	3qC	Mus musculus NMDA receptor-regulated gene 1 (Narg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	tubedown; mNAT1; 5730450D16Rik; 6330400I15; Tbdn-1; MGC29428	tubedown; mNAT1; 5730450D16Rik; 6330400I15; Tbdn-1; MGC29428
Mus musculus	RefSeq	ILMN_184648	ILMN_251481	NARG1	NM_053089.2	NM_053089.2		74838	28269696	NM_053089.2	Narg1	NP_444319.2	ILMN_2639925	002750243	S	151	ACTGAGCGAGCCGGGCGGTGGCGGGAGCCGCGGGAGGAGCCGGAACCATG	3	+	51220201-51220244:51220245-51220250	3qC	Mus musculus NMDA receptor-regulated gene 1 (Narg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	tubedown; mNAT1; 5730450D16Rik; 6330400I15; Tbdn-1; MGC29428	tubedown; mNAT1; 5730450D16Rik; 6330400I15; Tbdn-1; MGC29428
Mus musculus	RefSeq	ILMN_197294	ILMN_197294	LOC218476	XM_127483.2	XM_127483.2			38075037	XM_127483.2	LOC218476		ILMN_2527619	006650601	S	4434	GGGAGAAAATGGTCAGATTTACCAGAACCCAGTCACCTGGCTCAAGGAGC										
Mus musculus	Riken	ILMN_204313	ILMN_204313	ARPC4	ri|5830420A08|PX00039E11|AK030840|4316					AK030840	Arpc4		ILMN_1260027	002100113	S	4035	AATCCTAGCCCTTGGAAGGCTGAGACTGAGGAGGGACAGCCCAAGACCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_222438	ILMN_222438	SCFD1	scl0002406.1_1	XM_126906.2			28521073	XM_126906.2	Scfd1		ILMN_2749604	003800520	S	115	GCGGATGTTGAATTTCAATGTGCCTCATGTTAAAAACAGTACTGGAGAAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]			
Mus musculus	RefSeq	ILMN_216707	ILMN_216707	OLFR1057	NM_207563.2	NM_207563.2		404325	112807187	NM_207563.2	Olfr1057	NP_997446.1	ILMN_1232782	005810192	S	789	GACTAATCACTCCTTAGACACTGACAAGATGGCTTCTGTGTTCTACACCC	2	-	86214729-86214778	2qD	Mus musculus olfactory receptor 1057 (Olfr1057), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR185-11	MOR185-11
Mus musculus	RefSeq	ILMN_199785	ILMN_199785	LOC383010	XM_356798.1	XM_356798.1			38077313	XM_356798.1	LOC383010		ILMN_1220190	007150274	S	39	AGCACTAAAAAATGGTAACTCCTTCTGCCTTCCGCAGGCCGTTTCCACCG										
Mus musculus	RefSeq	ILMN_197077	ILMN_197077	LOC381322	XM_358553.1	XM_358553.1			38073833	XM_358553.1	LOC381322		ILMN_1237734	000540661	S	182	GCCGCTGGCCGCAGGGAAAAGTAAACAGCCCAAGTGTCTGGGAACAAAGG										
Mus musculus	Riken	ILMN_207225	ILMN_207225	MYH11	ri|D730034D17|PX00673P08|AK085742|1728					AK085742	Myh11		ILMN_1224007	001770341	S	1640	CCAGCCTGTCAGGGTTGTGTAGGGACCACTGGCCTAAGCTTGTTTATCAG						A filament of myosin found in a muscle cell of any type [goid 5859] [evidence IDA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; A filament of myosin found in a muscle cell of any type [goid 5859] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; The contractile fiber of smooth muscle cells [goid 30485] [evidence IDA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IDA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IMP]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193873	ILMN_227806	AGRN	NM_021604.2	NM_021604.2		11603	42490750	NM_021604.2	Agrn	NP_067617.2	ILMN_2674367	004040270	S	6745	CGGTGATCCGAGGCTAGAGGGAGCTGCATGGTATCTTGTTACTAACTCAG	4	-	155539446-155539495	4qE2	Mus musculus agrin (Agrn), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of synaptic growth at neuromuscular junctions [goid 8582] [evidence IMP]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IDA]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IGI]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence ISO]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IMP]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the plasma membrane [goid 7009] [evidence IMP]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IDA]	Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is changed [goid 30548] [evidence IDA]	Agrin	Agrin
Mus musculus	RefSeq	ILMN_196979	ILMN_196979	LOC217591	XM_138082.2	XM_138082.2			38050532	XM_138082.2	LOC217591		ILMN_2526468	004250414	S	894	GGGCTCTGAGAAGAGGGATGAGGGCTCTGAGAATGGGGATGTGAAATGCG										
Mus musculus	RefSeq	ILMN_221931	ILMN_221931	ERDR1	NM_133362.2	NM_133362.2		170942	141802795	NM_133362.2	Erdr1	NP_579940.1	ILMN_1246153	004880187	S	106	GTGGGCGTGAATGGAAAGTCTAACCCGTGTTTCTCTGTTCAGCGTCCGCC					Mus musculus erythroid differentiation regulator 1 (Erdr1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	edr; MGC5764	edr; MGC5764
Mus musculus	RefSeq	ILMN_209830	ILMN_209830	ERGIC3	NM_025516.2	NM_025516.2		66366	31981289	NM_025516.2	Ergic3	NP_079792.1	ILMN_2992541	007040762	S	1119	GGCCTCATTGACTCGCTCATCTACCACTCCGCTCGGGCCATCCAGAAGAA	2	+	155709534-155709583	2qH1	Mus musculus ERGIC and golgi 3 (Ergic3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		NY-BR-84; 2310015B14Rik; DKFZp547A2190; CGI-54; D2Ucla1; Sdbcag84; AV318804	NY-BR-84; 2310015B14Rik; DKFZp547A2190; CGI-54; D2Ucla1; Sdbcag84; AV318804
Mus musculus	RefSeq	ILMN_259901	ILMN_259901	MTHFD2L	NM_026788.1	NM_026788.1		665563	124301197	NM_026788.1	Mthfd2l	NP_081064.1	ILMN_2995866	001050608	S	2198	TATCACTAATATCTCAAGTGTCCAATAAAAGCATTTTGAAGAAGAAAAAA	5	+	91450349-91450394	5qE1	Mus musculus methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like (Mthfd2l), mRNA.				Mthfd2l; C630010D07Rik	Mthfd2l; C630010D07Rik
Mus musculus	RefSeq	ILMN_256827	ILMN_256827	REX2	NM_009051.2	NM_009051.2		19715	66792811	NM_009051.2	Rex2	NP_033077.2	ILMN_3062349	000940598	I	3502	CACAGATTGTAGTTGATAGTGTATTTGACAAACTGAGCCACCAAGACTGC	4	+	145889302-145889351	4qE1	Mus musculus reduced expression 2 (Rex2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_256827	ILMN_256827	REX2	NM_009051.2	NM_009051.2		19715	66792811	NM_009051.2	Rex2	NP_033077.2	ILMN_3139986	002650474	A	780	ACAAATGCTTTACTGACAAATGCACTCTGAGAAAGCATCAGAGAATTCAT	4	+	145886580-145886629	4qE1	Mus musculus reduced expression 2 (Rex2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214492	ILMN_328800	NR3C2	NM_001083906.1	NM_001083906.1		110784	144227211	NM_001083906.1	Nr3c2	NP_001077375.1	ILMN_2648549	004860491	S	177	GTCAGCTGCGTTTCCGGTGCTACTCCGAACAACAGTACTCAAGGGAGCAG	8	+	79432312-79432361	8qC1	Mus musculus nuclear receptor subfamily 3, group C, member 2 (Nr3c2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IMP]; The regulation of the levels, transport, and metabolism of sodium ions within a cell or between a cell and its external environment [goid 6883] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IDA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]	Mlr; MR	Mlr; MR
Mus musculus	RefSeq	ILMN_214492	ILMN_328800	NR3C2	NM_001083906.1	NM_001083906.1		110784	144227211	NM_001083906.1	Nr3c2	NP_001077375.1	ILMN_2751258	000060646	S	597	CATGAGAAGAGCCCCTCTGTTTGCAGCCCGCTCAACATGCCGTCTTCAGT	8	+	79432732-79432781	8qC1	Mus musculus nuclear receptor subfamily 3, group C, member 2 (Nr3c2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IMP]; The regulation of the levels, transport, and metabolism of sodium ions within a cell or between a cell and its external environment [goid 6883] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IDA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]	Mlr; MR	Mlr; MR
Mus musculus	RefSeq	ILMN_207406	ILMN_311345	LOC100042508	XM_001478492.1	XM_001478492.1		100042508	149268606	XM_001478492.1	LOC100042508	XP_001478542.1	ILMN_1217543	006370468	S	1431	GGCAATTCTAGAGTGTTGGGATCTCTGGCAAACGCTGGGAAGATGGGTGC	17	+	21667883-21667932	17qA3.2	PREDICTED: Mus musculus similar to zinc finger protein 54 (LOC100042508), mRNA.					
Mus musculus	RefSeq	ILMN_241079	ILMN_241079	CNTLN	NM_177385.3	NM_177385.3		338349	87299622	NM_177385.3	Cntln	NP_796359.1	ILMN_3070285	002490240	I	1648	TGTGTGCATGAGGAAAGAACACCTCAGTGCATACGTGCATATATCCATCG	4	+	84603744-84603793	4qC4	Mus musculus centlein, centrosomal protein (Cntln), transcript variant 2, mRNA.				AI448092; B430108F07Rik	AI448092; B430108F07Rik
Mus musculus	RefSeq	ILMN_241079	ILMN_241079	CNTLN	NM_177385.3	NM_177385.3		338349	87299622	NM_177385.3	Cntln	NP_796359.1	ILMN_3148902	006550551	A	895	CGCTGCACTGACCTGCTAAATGACCTGGAGAAACTGAGGAACCAGGAAGC	4	+	84602991-84603040	4qC4	Mus musculus centlein, centrosomal protein (Cntln), transcript variant 2, mRNA.				AI448092; B430108F07Rik	AI448092; B430108F07Rik
Mus musculus	RefSeq	ILMN_210650	ILMN_259714	AI790298	XM_902445.3	XM_902445.3		107239	149270257	XM_902445.3	AI790298	XP_907538.3	ILMN_1234746	001510066	S	3050	GGAGAGAACCTTCACCAGCCCCTAGCCTTGGACAAAGGCCATGAAATGGG	19	-	4164890-4164939	19qA	PREDICTED: Mus musculus expressed sequence AI790298, transcript variant 3 (AI790298), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200759	ILMN_200759	LOC381856	XM_358663.1	XM_358663.1			38085934	XM_358663.1	LOC381856		ILMN_2539901	006560196	S	123	CCTGTCAAAAATGCCAATCCTGAAGAGCCTGGGGGTGGGAGACCCTAAGG										
Mus musculus	MEEBO	ILMN_194148	ILMN_194148	SCL0003456.1_247	scl0003456.1_247						scl0003456.1_247		ILMN_1248810	000010082	S	9	GCAGGGCCAGCAACGACCCCAAGAGGAATGACTTGAGGCAAAACCCTTCC										
Mus musculus	RefSeq	ILMN_194813	ILMN_255301	FAM105A	NM_198301.1	NM_198301.1		223433	38142473	NM_198301.1	Fam105a	NP_938043.1	ILMN_1237038	005670128	S	1268	GTAAGAATCTCTCTGTGGATTTGGAACAATCGTAAATAAACAGGGCCAAG	15	-	27586294-27586343	15qB1	Mus musculus family with sequence similarity 105, member A (Fam105a), mRNA.				9830126M18; MGC59004	9830126M18; MGC59004
Mus musculus	MEEBO	ILMN_212661	ILMN_212661	4632418H02RIK	scl36311.1.2_8	XM_150247.1			20896456	XM_150247.1	4632418H02Rik		ILMN_2628969	006020431	S	2335	CCCAGCACCGTGGCCACTCCTTTACTCTCGAGGTTAAAGTTTTCCATTCT										
Mus musculus	RefSeq	ILMN_192999	ILMN_192999	V1RC28	NM_134183.1	NM_134183.1		171201	21717694	NM_134183.1	V1rc28	NP_598944.1	ILMN_2493240	002350192	S	533	CAGTGGCAATGTCTAGAGATGTTTTTCTTGTAGGTGTCATGATGACCACA	6	-	57793869-57793918	6qB3	Mus musculus vomeronasal 1 receptor, C28 (V1rc28), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	Riken	ILMN_202139	ILMN_202139	MOBP	ri|2900076O11|ZX00069D24|AK013799|1477					AK013799	Mobp		ILMN_2547305	004180328	S	1410	GGAGAGGGTCGATGTGAAGTCTGTGAATAGTCTGGGATGTTTACAAGGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IDA]		
Mus musculus	RefSeq	ILMN_259283	ILMN_259283	OLFR177	NM_146996.1	NM_146996.1		258998	22128944	NM_146996.1	Olfr177	NP_667207.1	ILMN_2862519	005570437	S	114	CATGGTGGGAAATCTTGGGCTGGTGACCTTGATCTACATAGAACCTCGTC					Mus musculus olfactory receptor 177 (Olfr177), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR184-7	MOR184-7
Mus musculus	RefSeq	ILMN_248175	ILMN_248175	NEDD1	NM_008682.1	NM_008682.1		17997	6679031	NM_008682.1	Nedd1	NP_032708.1	ILMN_2993455	002060152	S	3198	GTCTGTTTGTGTGTCAAGTTTCTGTGGCCTTTTCTTGGCAGCTATGGCCG	10	-	92147717-92147766	10qC2	Mus musculus neural precursor cell expressed, developmentally down-regulated gene 1 (Nedd1), mRNA.					
Mus musculus	MEEBO	ILMN_184423	ILMN_184423	3010015K02RIK	scl36043.4_243						3010015K02Rik		ILMN_2418503	006580019	S	20	ACCTGGTGCCAACTGAGAAGAAAAGATCTGCCCTTCGGTGGGGTGTGCGT										
Mus musculus	MEEBO	ILMN_211147	ILMN_211147	LOC385109	IGKV4-72_AJ231219_Ig_kappa_variable_4-72_18	XM_358058.1			38093546	XM_358058.1	LOC385109		ILMN_1243197	007200039	S	23	CAGCTTCCTGCTAATCAGTGCTTCAGTCATAATGTCCAGAGGACAAATTG										
Mus musculus	RefSeq	ILMN_210816	ILMN_210816	ALG9	NM_133981.1	NM_133981.1		102580	19527201	NM_133981.1	Alg9	NP_598742.1	ILMN_2892292	006860273	S	2169	CACTGGAGGGAGAAGAGTAGAACGTGCTTGCAGAAACTGCGAGAGGACCT	9	+	50651240-50651289	9qA5.3	Mus musculus asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase) (Alg9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI747665; Dibd1; 8230402H15Rik; B430313H07Rik	AI747665; Dibd1; 8230402H15Rik; B430313H07Rik
Mus musculus	RefSeq	ILMN_210816	ILMN_210816	ALG9	NM_133981.1	NM_133981.1		102580	19527201	NM_133981.1	Alg9	NP_598742.1	ILMN_2609495	006200356	S	1926	CTAGGGCTTCCACGGAGCCGACTTCCTCCAAGGCATCCTGTTAGAGCTGT	9	+	50650997-50651046	9qA5.3	Mus musculus asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase) (Alg9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI747665; Dibd1; 8230402H15Rik; B430313H07Rik	AI747665; Dibd1; 8230402H15Rik; B430313H07Rik
Mus musculus	RefSeq	ILMN_210816	ILMN_210816	ALG9	NM_133981.1	NM_133981.1		102580	19527201	NM_133981.1	Alg9	NP_598742.1	ILMN_2687908	000270470	S	1509	GGCAGCTTCAGTTCATTCCATCAGAGTTCAGAGGTCAGCTACCAAAGCCT	9	+	50616784-50616833	9qA5.3	Mus musculus asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase) (Alg9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI747665; Dibd1; 8230402H15Rik; B430313H07Rik	AI747665; Dibd1; 8230402H15Rik; B430313H07Rik
Mus musculus	MEEBO	ILMN_195809	ILMN_195809	8430436F23RIK	scl24457.1.1_8						8430436F23Rik		ILMN_2518919	006560437	S	4	TTTCCTGGTTTTAAAAATGTTTATAAAAAAAGAACTTTTATAACAAGCTA										
Mus musculus	MEEBO	ILMN_188033	ILMN_188033	GNA-RS1	scl50754.6_255				6680030	NM_008136	Gna-rs1		ILMN_1223648	003140543	S	1709	CTCGCAGCTTTGCTTCTGGGCTGAGCTGGAGGTGTCTTCCCTTTGCCACC										
Mus musculus	RefSeq	ILMN_255544	ILMN_255544	TBCD	NM_029878.1	NM_029878.1		108903	28077066	NM_029878.1	Tbcd	NP_084154.1	ILMN_2891506	002900292	S	3473	CGACCTGGTAGATGCCGAGGTGCTTGATGAGGTCATGTCTGTGCTCAGTG	11	+	121426122-121426171	11qE2	Mus musculus tubulin-specific chaperone d (Tbcd), mRNA.				mKIAA0988; 2310057L06Rik; A030005L14Rik	mKIAA0988; 2310057L06Rik; A030005L14Rik
Mus musculus	RefSeq	ILMN_211965	ILMN_211965	LMX1A	NM_033652.2	NM_033652.2		110648	31543125	NM_033652.2	Lmx1a	NP_387501.1	ILMN_2823980	007040689	S	3027	CATGCCCGGGACCATCATCAGAGCCATGACTATGCCCACATATCCACTTC	1	+	169685097-169685146	1qH2.3	Mus musculus LIM homeobox transcription factor 1 alpha (Lmx1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus [goid 21542] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	sst; MGC129356; MGC129357; Lmx1.1; dr; dreher	sst; MGC129356; MGC129357; Lmx1.1; dr; dreher
Mus musculus	RefSeq	ILMN_186693	ILMN_257753	VCPIP1	NM_173443.2	NM_173443.2		70675	70778825	NM_173443.2	Vcpip1	NP_775619.2	ILMN_1213574	002680528	S	3813	CCATGGAGGAACCTGAAGAGATGGATAGTCAAGATGCTGAGACGACTAAC	1	-	9714589-9714638	1qA2	Mus musculus valosin containing protein (p97)/p47 complex interacting protein 1 (Vcpip1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	5730421J18Rik; VCIP135; 5730538E15Rik; mKIAA1850; 4932442A08	5730421J18Rik; VCIP135; 5730538E15Rik; mKIAA1850; 4932442A08
Mus musculus	RefSeq	ILMN_193185	ILMN_255140	1700085A12RIK	XM_986882.1	XM_986882.1		78631	94407175	XM_986882.1	1700085A12Rik	XP_991976.1	ILMN_2494817	007200504	S	142	GCTTTATGCTACAAATGTTGTGATGAGATAACAGGAAAGGGAAAGAGAGT				XqA3.3	PREDICTED: Mus musculus RIKEN cDNA 1700085A12 gene (1700085A12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_193906	ILMN_255140	1700085A12RIK	XM_986882.1	XM_986882.1		78631	94407175	XM_986882.1	1700085A12Rik	XP_991976.1	ILMN_1215038	000840520	S	69	GGCAACATCCCAGCTGAAGAAATGTAAAGTATCCTGTCGTCTTAAGTGCA				XqA3.3	PREDICTED: Mus musculus RIKEN cDNA 1700085A12 gene (1700085A12Rik), mRNA.					
Mus musculus	Riken	ILMN_204040	ILMN_204040	A730020L24RIK	ri|A730020L24|PX00149N19|AK042745|2254					AK042745	A730020L24Rik		ILMN_1226427	006860064	S	2009	CAGGTGCAGAAGCCAAATCTCTCTGACCCAGCCCTTCCCATTTGTCCAGG										
Mus musculus	RefSeq	ILMN_212450	ILMN_212450	JAG2	NM_010588.2	NM_010588.2		16450	146134328	NM_010588.2	Jag2	NP_034718.2	ILMN_2626585	006520131	S	3971	TTTTTGTAAAGTTTCCGCGTCCGCACGCACTGTGGCAGGAGAGCAGGGCG				12qF1	Mus musculus jagged 2 (Jag2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence NAS]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence ISS]; The process of T cell selection that occurs in the thymus [goid 45061] [evidence ISS]; The process by which the cellular identity of auditory hair cells is acquired and determined [goid 9912] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence NAS]; The process whereby a relatively unspecialized hemopoietic cell acquires specialized features of a gamma-delta T cell [goid 42492] [evidence IMP]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISS]	D12Ggc2e; sm; Serh; mJagged2-1	D12Ggc2e; sm; Serh; mJagged2-1
Mus musculus	MEEBO	ILMN_185378	ILMN_185378	SCL0002230.1_22	scl0002230.1_22						scl0002230.1_22		ILMN_2426544	005700129	S	2	CCATCCTACGGCAAAAAGTTTTGATCACAATACCTATCATGTGTCCTGCA										
Mus musculus	RefSeq	ILMN_192780	ILMN_309853	1700101C01RIK	XR_035461.1	XR_035461.1		73586	149249625	XR_035461.1	1700101C01Rik		ILMN_2491275	005570673	S	346	AACTGTAGTCCGCCCTAGGGTCTGAACGCGTGTGGCGAGCTGCTTTTTCC					PREDICTED: Mus musculus RIKEN cDNA 1700101C01 gene (1700101C01Rik), misc RNA.					
Mus musculus	MEEBO	ILMN_221632	ILMN_221632	BC039093	scl23794.11.1_22	XM_131700.4			38078821	XM_131700.4	BC039093		ILMN_2738156	001820215	S	2726	GTCGTCTGATACTCCGTATTGTAGCTTTTGTCCGCATGTTACTACCCTGT										
Mus musculus	Riken	ILMN_202141	ILMN_202141	HNRPAB	ri|2900056O08|ZX00069H07|AK013709|1247					AK013709	Hnrpab		ILMN_1259056	006620440	S	1098	CACCCAGGACAATAGCCAGCCCTTAGACTGCAATTAGAACGCCCTGGCCC										
Mus musculus	RefSeq	ILMN_223421	ILMN_223421	SON	NM_019973.2	NM_019973.2		20658	124378036	NM_019973.2	Son	NP_064357.2	ILMN_2763871	006660093	S	6519	GTGAGCAACACGCAGAAGCTCGCCTACAGTTTCGTTTCCATTCACGACGT	16	+	91662796-91662845	16qC3.3	Mus musculus Son DNA binding protein (Son), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA409051; 2900011L12Rik; C81487; mKIAA1019	AA409051; 2900011L12Rik; C81487; mKIAA1019
Mus musculus	RefSeq	ILMN_195851	ILMN_310722	LOC100044842	XM_001473618.1	XM_001473618.1		100044842	149269571	XM_001473618.1	LOC100044842	XP_001473668.1	ILMN_1255680	001940059	S	1948	ACAAAACGCACTCAGACTTTGTGGCTGAAGGCAAAGGTCCTCAGCACAAG					PREDICTED: Mus musculus similar to cyclin fold protein 1, transcript variant 1 (LOC100044842), mRNA.					
Mus musculus	RefSeq	ILMN_195851	ILMN_310722	LOC100044842	XM_001473618.1	XM_001473618.1		100044842	149269571	XM_001473618.1	LOC100044842	XP_001473668.1	ILMN_2672789	002750575	S	3295	TCAGACTGTTGACTATTGTTTTCAAGCCTTGTACACTGGACTCTACCTCT					PREDICTED: Mus musculus similar to cyclin fold protein 1, transcript variant 1 (LOC100044842), mRNA.					
Mus musculus	RefSeq	ILMN_241295	ILMN_241295	1810030N24RIK	NM_025471.1	NM_025471.1		66291	13384889	NM_025471.1	1810030N24Rik	NP_079747.1	ILMN_2873180	003360112	S	603	AGTGGGACTAACTGCTGCTTCCTTCAGGTGGAGTGTTATTATAGGCTCCG	4	-	34957833-34957875:34957876-34957882	4qA5	Mus musculus RIKEN cDNA 1810030N24 gene (1810030N24Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-76M15.5; 2810406B13Rik	RP23-76M15.5; 2810406B13Rik
Mus musculus	RefSeq	ILMN_187493	ILMN_187493	V1RE5	NM_134194.1	NM_134194.1		171228	21717710	NM_134194.1	V1re5	NP_598955.1	ILMN_1224906	005910075	S	700	CAGAAAATCCTCACCCTGGTTTGCACCTTTCTAGCTTTTTATACTCTCTC	17	+	20639962-20640011	17qA3.2	Mus musculus vomeronasal 1 receptor, E5 (V1re5), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	MEEBO	ILMN_190888	ILMN_190888	2610042O14RIK	scl19933.8_116				13385017	NM_025575	2610042O14Rik		ILMN_1255070	004610181	S	12	CAAGAGACATGTGGAGACTTGTGCACTTGCCGCTCAAAACAGTTAACCCC										
Mus musculus	RefSeq	ILMN_217618	ILMN_217618	HCLS1	NM_008225.1	NM_008225.1		15163	6680186	NM_008225.1	Hcls1	NP_032251.1	ILMN_2685516	007570348	S	1578	CCCACTCCATGGTACTGCTGCAAGGACCTGGCTGAACATCATGAGATGCC	16	+	36962892-36962941	16qB3	Mus musculus hematopoietic cell specific Lyn substrate 1 (Hcls1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 42531] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]	HS1; AW213261	HS1; AW213261
Mus musculus	RefSeq	ILMN_220464	ILMN_220464	SCRIB	NM_134089.1	NM_134089.1		105782	20373162	NM_134089.1	Scrib	NP_598850.1	ILMN_2742887	000840066	S	4234	ATTGGCTCAGGCCTGGCCAAGGAACTCCCCGGCCCCCAGGGGCAGAGGTG	15	-	75879897-75879946	15qD3	Mus musculus scribbled homolog (Drosophila) (Scrib), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific asymmetric distribution [goid 8105] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Scrb1; CRIB; mKIAA0147; vartul; Crc; SCRIB1; AI118201; KIAA0147	Scrb1; CRIB; mKIAA0147; vartul; Crc; SCRIB1; AI118201; KIAA0147
Mus musculus	RefSeq	ILMN_220464	ILMN_220464	SCRIB	NM_134089.1	NM_134089.1		105782	20373162	NM_134089.1	Scrib	NP_598850.1	ILMN_2722389	005870551	S	4831	TCCTGCAGAGCGACGGGCTCTAGAGGCAGAGAAGCGAGCTCTGTGGAGGG	15	-	75878878-75878927	15qD3	Mus musculus scribbled homolog (Drosophila) (Scrib), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific asymmetric distribution [goid 8105] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Scrb1; CRIB; mKIAA0147; vartul; Crc; SCRIB1; AI118201; KIAA0147	Scrb1; CRIB; mKIAA0147; vartul; Crc; SCRIB1; AI118201; KIAA0147
Mus musculus	RefSeq	ILMN_220464	ILMN_220464	SCRIB	NM_134089.1	NM_134089.1		105782	20373162	NM_134089.1	Scrib	NP_598850.1	ILMN_2828731	006270475	S	5262	GCCCTGAAGACATGACGCTGTGCAGCAGCCGTCGGTCTGTGCGGCCGGGA	15	-	75877851-75877900	15qD3	Mus musculus scribbled homolog (Drosophila) (Scrib), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific asymmetric distribution [goid 8105] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Scrb1; CRIB; mKIAA0147; vartul; Crc; SCRIB1; AI118201; KIAA0147	Scrb1; CRIB; mKIAA0147; vartul; Crc; SCRIB1; AI118201; KIAA0147
Mus musculus	RefSeq	ILMN_187893	ILMN_251618	MIZF	NM_172162.2	NM_172162.2		102423	142385795	NM_172162.2	Mizf	NP_751894.1	ILMN_2618038	000160017	S	1106	CAAGAAGCACCAGTTCAAGTGGCCCTCAGGACACCCTCGCTTTCGGTACA	9	-	44104658-44104663:44105776-44105819	9qA5.2	Mus musculus MBD2-interacting zinc finger (Mizf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434F162; AA589481	DKFZp434F162; AA589481
Mus musculus	RefSeq	ILMN_222025	ILMN_222025	PRL7D1	NM_011120.1	NM_011120.1		18814	6755101	NM_011120.1	Prl7d1	NP_035250.1	ILMN_1215580	002510070	S	532	CAAAGGCCGAAGCCATTGAGGCAAAAAACAAAGACCTTCTAGAGTACATC	13	-	27801940-27801989	13qA3.1	Mus musculus prolactin family 7, subfamily d, member 1 (Prl7d1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the migration of the endothelial cells of blood vessels [goid 43537] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	PLF-RP; PRP; Plfr; MGC117676	PLF-RP; PRP; Plfr; MGC117676
Mus musculus	RefSeq	ILMN_186791	ILMN_315085	SMCR8	NM_001085440.1	NM_001085440.1		237782	146198709	NM_001085440.1	Smcr8	NP_001078909.1	ILMN_2438524	007330400	S	7308	AAAAATTTGATTGTCCATATTAAAAAGTTACTGATGGTTTGCAATTCAGC				11qB2	Mus musculus Smith-Magenis syndrome chromosome region, candidate 8 homolog (human) (Smcr8), transcript variant 1, mRNA.				AI642055; 2310076G09Rik; MGC103295; D030073L15Rik	AI642055; 2310076G09Rik; MGC103295; D030073L15Rik
Mus musculus	RefSeq	ILMN_213394	ILMN_213394	SLC10A6	NM_029415.1	NM_029415.1		75750	21313061	NM_029415.1	Slc10a6	NP_083691.1	ILMN_2822000	000780253	S	1787	CATCTTCACACACCTGTGTTACCTACCTCATTCCTTAGAACAGTGGCTGC	5	-	103846300-103846349	5qE5	Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 6 (Slc10a6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	MGC149979; 8430417G17Rik; Soat; C78479	MGC149979; 8430417G17Rik; Soat; C78479
Mus musculus	MEEBO	ILMN_218597	ILMN_218597	TCL1B4	scl42820.4.1_101	NM_013774.1			7305558	NM_013774.1	Tcl1b4		ILMN_2697817	001340075	S	551	GGTCTTTTTACATGATCTTCTTTCTGTGAGCCTGGCCTATCTGTGGCTTG										
Mus musculus	RefSeq	ILMN_220414	ILMN_220414	DPP9	NM_172624.1	NM_172624.1		224897	27369899	NM_172624.1	Dpp9	NP_766212.1	ILMN_2964344	004150504	S	3088	GGTACCGAGCAATGAAACTGAAGGTACAGCACTGGGCGTCTGGGGACCCC	17	-	55820709-55820758	17qD	Mus musculus dipeptidylpeptidase 9 (Dpp9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	A330078I11; 6430584G11Rik; DPRP2	A330078I11; 6430584G11Rik; DPRP2
Mus musculus	RefSeq	ILMN_208703	ILMN_208703	RAB3D	NM_031874.4	NM_031874.4		19340	133893108	NM_031874.4	Rab3d	NP_114080.2	ILMN_2588737	001470278	S	3737	CTCTGTTTCCGTGTGCTGATTCTGCTCCTGGCTCCACGCTAGCAATTCTG	9	-	21712035-21712084	9qA3	Mus musculus RAB3D, member RAS oncogene family (Rab3d), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded, cytoplasmic secretory granule found in enzyme-secreting cells and visible by light microscopy. Contain zymogen, an inactive enzyme precursor, often of a digestive enzyme [goid 42588] [evidence IDA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]; The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine [goid 18125] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C130057E11Rik	C130057E11Rik
Mus musculus	MEEBO	ILMN_189230	ILMN_189230	ACSL5	scl0071879.1_113						Acsl5		ILMN_2459477	001450307	S	9	CCTTTCTGGCTGCTAACTGGATCAAGAATATTCACTATTTCCCCATGCCC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196999	ILMN_196999	LOC329257	XM_287042.1	XM_287042.1			28482272	XM_287042.1	LOC329257		ILMN_2526546	002320138	S	234	GGTTTTCCAGTTCTCTGTGTGTTGAGAGGAGTGACTTGCAGAAGGTGCCG										
Mus musculus	Riken	ILMN_203146	ILMN_203146	6720402K17RIK	ri|6720402K17|PX00058J10|AK032696|1614					AK032696	6720402K17Rik		ILMN_2555071	005130246	S	903	CAAACCCAAACATAGCCTAAGGGCAAGTATCTCATGGTCACGCCCTGAAG										
Mus musculus	MEEBO	ILMN_191677	ILMN_191677	AI504432	scl22745.3_318				31341078	NM_173787	AI504432		ILMN_1226048	000050059	S	16	CTCAGCAAGAGTCTGTGATGTGTTCTGTCTTTCTCTGTGCAATGCAGTGT										
Mus musculus	Riken	ILMN_203767	ILMN_203767	A230045I01RIK	ri|A230045I01|PX00128A15|AK038576|737					AK038576	A230045I01Rik		ILMN_2559825	000520576	S	268	GGGATACGGTAAGAGAGGGCAAAACAATTTAGTACCAGACTGAGGCCCAG										
Mus musculus	RefSeq	ILMN_209621	ILMN_209621	FZD8	NM_008058.1	NM_008058.1		14370	6679886	NM_008058.1	Fzd8	NP_032084.1	ILMN_2597578	004250102	S	1993	ACGTGGCGGTCTGGCACGGCCAGCTCTGTATCTTACCCTAAGCAAATGCC	18	+	9214910-9214959	18qA1	Mus musculus frizzled homolog 8 (Drosophila) (Fzd8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with Wnt-protein, a secreted growth factor involved in signaling [goid 17147] [evidence IPI]; Combining with a member of the Wnt family of signaling molecules to initiate a change in cell activity [goid 42813] [evidence IPI]	mFZ8; Fz8	mFZ8; Fz8
Mus musculus	RefSeq	ILMN_200553	ILMN_200553	LOC383336	XM_356992.1	XM_356992.1			38083653	XM_356992.1	LOC383336		ILMN_1260382	002370152	S	424	GTCTCTGATAATGAAGTGCTGATGTGGAAATTGGGCTTCTGGCTGTGGTG										
Mus musculus	RefSeq	ILMN_211340	ILMN_235641	MMP25	NM_001033339.3	NM_001033339.3		240047	146198618	NM_001033339.3	Mmp25	NP_001028511.1	ILMN_1232783	000160041	S	2666	CTAGTCCTACTGATCACAGTGGGATGGTGACTGTACTCTGACTAGATGCG				17qA3.3	Mus musculus matrix metallopeptidase 25 (Mmp25), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence ISO]	MMP20; Leukolysin; MT6-MMP; F730048C11Rik	MMP20; Leukolysin; MT6-MMP; F730048C11Rik
Mus musculus	RefSeq	ILMN_207506	ILMN_207506	9030623C06RIK	XM_137845.1	XM_137845.1			20914088	XM_137845.1	9030623C06Rik		ILMN_2587896	005050201	I	1102	CAAGGCAACCCCCAGCACAACAGCAATGCTACACACAGGACAATGAGACA										
Mus musculus	RefSeq	ILMN_198388	ILMN_198388	LOC381199	XM_355130.1	XM_355130.1			38084801	XM_355130.1	LOC381199		ILMN_2531508	002350474	S	1127	TGGACTTCACAGAGCTTGAGTGGCACATCTGCTCCAACCGGCAGCTGGTG										
Mus musculus	Riken	ILMN_206842	ILMN_206842	C230059I24RIK	ri|C230059I24|PX00176E05|AK082529|1910					AK082529	C230059I24Rik		ILMN_1251724	004880424	S	1553	CACCCCAGAGTAGCTCCCAGACAGTGCCATGATTACTATCCCATGCTAGA										
Mus musculus	Riken	ILMN_204039	ILMN_204039	TC10L-PENDING FRAGMENT	ri|A730008C17|PX00149L07|AK042583|3064					AK042583	Tc10l-pending FRAGMENT		ILMN_1213647	000360167	S	2628	GGGTCCTACTGACCCACTCTGATAGAACAACAGGAAACACATCTGCCGTG										
Mus musculus	Riken	ILMN_205683	ILMN_205683	E030017M08RIK	ri|E030017M08|PX00204L03|AK053151|3785					AK053151	E030017M08Rik		ILMN_1255968	005700554	S	3598	CACTCAGGGAACCACACCTGACTGGAGTCTCTCACTTCCCAGGAACACCA										
Mus musculus	MEEBO	ILMN_213297	ILMN_213297	C130070B15RIK	scl31693.1.1_17	NM_177286.2			31343246	NM_177286.2	C130070B15Rik		ILMN_1233646	000940341	S	2181	GTGCTGCTGCCAAATGTGGAGCCAGATGTGGTCATTGCATGAGCCTGTGC										
Mus musculus	RefSeq	ILMN_212067	ILMN_212067	A630033H20RIK	NM_175442.3	NM_175442.3		213438	142351977	NM_175442.3	A630033H20Rik	NP_780651.1	ILMN_2622363	004610280	S	1917	CACCGAAGTCACAGACTATGCAAACACCTAAAATAGAATTGTGCTCTGCA	X	+	104367909-104367958	XqD	Mus musculus RIKEN cDNA A630033H20 gene (A630033H20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RP23-35H8.2	RP23-35H8.2
Mus musculus	RefSeq	ILMN_209569	ILMN_209569	D5ERTD577E	NM_177187.2	NM_177187.2		320549	31343011	NM_177187.2	D5Ertd577e	NP_796161.1	ILMN_2597050	003850382	S	2399	AGGTACCTTTGCTACATAAAGTATTTACTTTCAAAAAGACTTGTATTTTA	5	+	95914520-95914569	5qE3	Mus musculus DNA segment, Chr 5, ERATO Doi 577, expressed (D5Ertd577e), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107406; E330023J07Rik	MGC107406; E330023J07Rik
Mus musculus	Riken	ILMN_202376	ILMN_202376	4930539G24RIK	ri|4930539G24|PX00034D01|AK015996|831					AK015996	4930539G24Rik		ILMN_2549136	003710762	S	579	CGTGCAGCATTCAGTAGACAAGGCCATCATGATGTATCACAGTGGCAGAG										
Mus musculus	RefSeq	ILMN_219174	ILMN_219174	WEE2	NM_201370.1	NM_201370.1		381759	41235772	NM_201370.1	Wee2	NP_958758.1	ILMN_2705242	002060180	S	2491	GTGTGAAACAACTAGAGTAAGACTATAATTTGGACATTCCTGAGCTGCTT	6	+	40416524-40416573	6qB1	Mus musculus WEE1 homolog 2 (S. pombe) (Wee2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	Gm1065; MGC60753	Gm1065; MGC60753
Mus musculus	RefSeq	ILMN_196934	ILMN_196934	LOC227326	XM_136804.2	XM_136804.2			38050324	XM_136804.2	LOC227326		ILMN_2526309	004120605	S	1129	CAAAGAATTTCGCATGCGCATCAAGGCCCACCGGCCCTCCACAATCAAGC										
Mus musculus	RefSeq	ILMN_210352	ILMN_210352	NT5DC1	NM_176968.4	NM_176968.4		319638	142366112	NM_176968.4	Nt5dc1	NP_795942.2	ILMN_1220423	002510279	S	2176	GGAAAGGGAGCTGGAAGACACAGTTGCTTAGGTACACTTCAGGTTAGGAT	10	-	34023908-34023957	10qB1	Mus musculus 5'-nucleotidase domain containing 1 (Nt5dc1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AW987726; Nt5c2l1; 6030401B09Rik; MGC107414	AW987726; Nt5c2l1; 6030401B09Rik; MGC107414
Mus musculus	Riken	ILMN_204376	ILMN_204376	9630058C17RIK	ri|9630058C17|PX00117D01|AK036326|1607					AK036326	9630058C17Rik		ILMN_1258346	005820274	S	1500	TGTGAGCACCCGAGCCTGAGCCCACATTGGGAAGGACAGAACCAGTTCCT										
Mus musculus	RefSeq	ILMN_212959	ILMN_250513	4930578N16RIK	NM_001077684.1	NM_001077684.1		75051	118150477	NM_001077684.1	4930578N16Rik	NP_001071152.1	ILMN_1215057	006840097	S	876	GAGGAGGAAGACGAAAAGATTAGAAAGTTTATCAAAGCCAAAAAACGTCT	2	-	69614225-69614274	2qC2	Mus musculus RIKEN cDNA 4930578N16 gene (4930578N16Rik), mRNA.				4930525K21Rik; RP23-174C9.4	4930525K21Rik; RP23-174C9.4
Mus musculus	RefSeq	ILMN_212959	ILMN_250513	4930578N16RIK	NM_001077684.1	NM_001077684.1		75051	118150477	NM_001077684.1	4930578N16Rik	NP_001071152.1	ILMN_2729534	003130747	S	1456	AATCAACAAAGAAATACGCCTACCCTATGGTAAAAGCTGTGCAGGAAGGA	2	-	69596339-69596388	2qC2	Mus musculus RIKEN cDNA 4930578N16 gene (4930578N16Rik), mRNA.				4930525K21Rik; RP23-174C9.4	4930525K21Rik; RP23-174C9.4
Mus musculus	MEEBO	ILMN_213402	ILMN_213402	1700093J21RIK	scl48837.2.1_3				51769397	XM_484572	1700093J21Rik		ILMN_2636708	002710220	S	252	GCCCGCCAAGATGCCACCTCATCCGTCAAGGGGCTGATTTTGACTAGCTG										
Mus musculus	RefSeq	ILMN_197556	ILMN_260934	LOC639581	XM_916075.3	XM_916075.3		639581	149251086	XM_916075.3	LOC639581	XP_921168.3	ILMN_1259586	005090255	S	1098	GGAAGAAGGTGTTCATGGGGCTATCTCATTCACTACGGGTACATTGGCTT					PREDICTED: Mus musculus similar to arylacetamide deacetylase-like 2 (LOC639581), mRNA.					
Mus musculus	MEEBO	ILMN_192168	ILMN_192168	SDCCAG33L	scl19858.3_536				51712740	XM_130644	Sdccag33l		ILMN_1256722	005820113	S	1	CGCAGACCTAGTACACAGTTTGGAAATGCAGGGGAAGATGGGTTTCTTCT										
Mus musculus	MEEBO	ILMN_192168	ILMN_192168	SDCCAG33L	scl19858.3_536				51712740	XM_130644	Sdccag33l		ILMN_1243934	006450070	S	4270	TGCTGGCATAGCAGAGGCGGCGGCAGAAGCTGAACTTAGCAGAGCTGACG										
Mus musculus	Riken	ILMN_207286	ILMN_207286	G630038A07RIK	ri|G630038A07|PL00013P21|AK090288|2819					AK090288	G630038A07Rik		ILMN_2586453	002070097	S	2493	CCAGGCTGGGTTCTAAGTCAAAGCAGTGCTGCTGATCCCAGGTGTTAGGG										
Mus musculus	RefSeq	ILMN_192971	ILMN_248663	ZFP641	NM_173769.3	NM_173769.3		239652	142350744	NM_173769.3	Zfp641	NP_776130.1	ILMN_1256695	006620768	S	3328	GCAAGCAGGCCTTAGTCTCCGGGGATTGGAGTCGTTCTAGAGTCAATGTG	15	-	98116848-98116897	15qF1	Mus musculus zinc finger protein 641 (Zfp641), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	9930016F01Rik	9930016F01Rik
Mus musculus	MEEBO	ILMN_209424	ILMN_209424	4930438O05RIK	scl000747.1_1241	NM_027507.1			28076970	NM_027507.1	4930438O05Rik		ILMN_2595651	002490746	S	4328	CCAGGCTTTTTACTGCACTCCTACAAGGGCTGTTCCGAGCTCACATTCCA										
Mus musculus	RefSeq	ILMN_229649	ILMN_229649	OLFR884	NM_001011798.1	NM_001011798.1		257996	58801361	NM_001011798.1	Olfr884	NP_001011798.1	ILMN_3161978	002070411	S	604	GTGGGTGTCAATGTGATAGTGCCCAGCCTGACTCTCTTTGTTTCTTATAC	9	+	37855412-37855461	9qA4	Mus musculus olfactory receptor 884 (Olfr884), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR162-9P; MOR162-13	MOR162-9P; MOR162-13
Mus musculus	MEEBO	ILMN_214307	ILMN_214307	OSBPL8	scl00237542.2_258	NM_175489.2			31342012	NM_175489.2	Osbpl8		ILMN_2646676	000110369	S	2337	ACTATTACTTCACTTTTGCTTTCATGGGTTATTTCAAAGAAGTAATTTAC							The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]			
Mus musculus	RefSeq	ILMN_213154	ILMN_213154	REEP6	NM_139292.1	NM_139292.1		70335	21314829	NM_139292.1	Reep6	NP_647453.1	ILMN_2661650	000010364	S	1734	GCCTCACCGAATAACTGCCCGTCATCAAAACAAGTCAAACATCTGCCGCA	10	+	79798929-79798978	10qC1	Mus musculus receptor accessory protein 6 (Reep6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	0610011M24Rik; Dp1l1	0610011M24Rik; Dp1l1
Mus musculus	RefSeq	ILMN_213154	ILMN_213154	REEP6	NM_139292.1	NM_139292.1		70335	21314829	NM_139292.1	Reep6	NP_647453.1	ILMN_2634216	004060142	S	608	CTCGTCACCCCAGCATCAACATCGGAACCCCCAGCCGCTCTGGAACTGGA	10	+	79797487-79797536	10qC1	Mus musculus receptor accessory protein 6 (Reep6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	0610011M24Rik; Dp1l1	0610011M24Rik; Dp1l1
Mus musculus	RefSeq	ILMN_225663	ILMN_225663	CDK5RAP2	NM_145990.3	NM_145990.3		214444	118130243	NM_145990.3	Cdk5rap2	NP_666102.2	ILMN_2842859	000110494	S	5272	GTTGCTGAAGCTCTTCTGGAGGGTCTCAGTCCCCACCAACGGCCAGTGTT	4	-	69896397-69896446	4qC2	Mus musculus CDK5 regulatory subunit associated protein 2 (Cdk5rap2), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC38528; 2900018K03Rik; mKIAA1633	MGC38528; 2900018K03Rik; mKIAA1633
Mus musculus	RefSeq	ILMN_202125	ILMN_225663	CDK5RAP2	NM_145990.3	NM_145990.3		214444	118130243	NM_145990.3	Cdk5rap2	NP_666102.2	ILMN_1220676	001570035	S	686	AGCAAGCTCTCGGCGATGAAGAAGATGCAGGAGGGGGACCTGGAGATGAC	4	-	70021868-70021917	4qC2	Mus musculus CDK5 regulatory subunit associated protein 2 (Cdk5rap2), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC38528; 2900018K03Rik; mKIAA1633	MGC38528; 2900018K03Rik; mKIAA1633
Mus musculus	RefSeq	ILMN_223432	ILMN_225663	CDK5RAP2	NM_145990.3	NM_145990.3		214444	118130243	NM_145990.3	Cdk5rap2	NP_666102.2	ILMN_1216515	002480379	S	5353	GGCAGAGAACACGAAACTACACAAAAAATTGTTTGAACAAGAAAAGAAGC	4	-	69889694-69889743	4qC2	Mus musculus CDK5 regulatory subunit associated protein 2 (Cdk5rap2), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC38528; 2900018K03Rik; mKIAA1633	MGC38528; 2900018K03Rik; mKIAA1633
Mus musculus	RefSeq	ILMN_221365	ILMN_221365	LCN9	NM_029959.2	NM_029959.2		77704	142368163	NM_029959.2	Lcn9	NP_084235.1	ILMN_2734581	006130148	S	748	CTCTGCCAATGAGATTTAAGCCACCAAGACATTCAAACTGATCTTAACTC	2	+	25680966-25681015	2qA3	Mus musculus lipocalin 9 (Lcn9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence IEA]	9230102I19Rik	9230102I19Rik
Mus musculus	RefSeq	ILMN_217605	ILMN_217605	NPTN	NM_009145.1	NM_009145.1		20320	6677896	NM_009145.1	Nptn	NP_033171.1	ILMN_2907793	003460468	S	1777	AACCTGACTGGGTTCTCATGCGGTACTAACTGTAGATGCATGTACTTGTG	9	+	58500555-58500604	9qB	Mus musculus neuroplastin (Nptn), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Sdfr1; AW554172	Sdfr1; AW554172
Mus musculus	Riken	ILMN_205200	ILMN_205200	D030018F01RIK	ri|D030018F01|PX00179I21|AK050768|1875					AK050768	D030018F01Rik		ILMN_2570753	003310259	S	1146	GTTGACTGGAAGCCTTGTAAGCATGGGAGTTTGCCCTCGCTCGTGGCTCA										
Mus musculus	MEEBO	ILMN_213569	ILMN_213569	1190003M12RIK	scl28735.6.1_187	XM_355795.1			38084945	XM_355795.1	1190003M12Rik		ILMN_2638473	001690286	S	684	CTTCCCATGGAACCTTGTGATCTGGGGGGAATAAGTGCATTTCTACCTTG										
Mus musculus	RefSeq	ILMN_210970	ILMN_210970	NUDT6	NM_153561.2	NM_153561.2		229228	118130109	NM_153561.2	Nudt6	NP_705789.1	ILMN_1253773	004280110	S	917	GGAGCTGCCGGAGAGTTACAAAGCCGCAACGGGAGCAGACTGAATACCAG	3	-	37310483-37310532	3qB	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 6 (Nudt6), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC27904; Asfgf2b	MGC27904; Asfgf2b
Mus musculus	MEEBO	ILMN_196157	ILMN_196157	SCL00008.1_398	scl00008.1_398	AK052321.1			26342556	AK052321.1	scl00008.1_398		ILMN_1226636	007050687	S	5	GCTCAGGGAGGACACAGAAAGTGAAGTGAAGGTAGAGAGATGGAACCCTG										
Mus musculus	Riken	ILMN_204912	ILMN_204912	C130079K02RIK	ri|C130079K02|PX00171B12|AK048580|1512					AK048580	C130079K02Rik		ILMN_2568571	000460608	S	1419	GTTTCCTGCTGCCTCTACTGGCTCAAGCTGGACAGAGCCAAAAGCCCTGC										
Mus musculus	Riken	ILMN_203436	ILMN_203436	D730006F06RIK	ri|D730006F06|PX00089H15|AK052794|1625					AK052794	D730006F06Rik		ILMN_1250981	003130008	S	1552	AGAGTTCTGCATGTTAGGCAAGGGTTCTACTATTGAGCCCCAGCCCAGCC										
Mus musculus	RefSeq	ILMN_210300	ILMN_210300	SFRS14	NM_172755.2	NM_172755.2		234373	31982110	NM_172755.2	Sfrs14	NP_766343.2	ILMN_2604227	003460279	S	3708	GTTTGTTCCTGTTCCTGGATGTGCGTCGTGCAAGTTGATTCTGTACCTGG	8	+	72786838-72786887	8qB3.3	Mus musculus splicing factor, arginine/serine-rich 14 (Sfrs14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	mKIAA0365; MGC66544	mKIAA0365; MGC66544
Mus musculus	Riken	ILMN_204517	ILMN_204517	B230365C01RIK	ri|B230365C01|PX00160J19|AK046289|529					AK046289	B230365C01Rik		ILMN_1252723	006330133	S	474	GGCAAAATGATCAGAAGTTCACAGCCAACCTGGGATACAGAGGAAGACCC										
Mus musculus	Riken	ILMN_207129	ILMN_207129	F730003B03RIK	ri|F730003B03|PL00002H12|AK089300|4138					AK089300	F730003B03Rik		ILMN_1222797	005960743	S	1542	AACCTTGACCAGAACCCATGGCTCTGATGGCTGAGAGCCTTTGCCAGGAG										
Mus musculus	Riken	ILMN_204304	ILMN_204304	PGLS	ri|3732417K11|PX00010H23|AK028344|2676					AK028344	Pgls		ILMN_2563949	007100192	S	2511	GGTCAGGGTCAGAGAGAGAGATAGCTACCAACCGGTGAGTACCCGACTTC							The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate [goid 17057] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201486	ILMN_201486	LOC385248	XM_358144.1	XM_358144.1			38094406	XM_358144.1	LOC385248		ILMN_2542471	004060278	S	28	GAAGCCAAAGCTCTTGTAGATGAGCTGAACAGAAAGGCTGGCGAGCAGAG										
Mus musculus	RefSeq	ILMN_213697	ILMN_213697	OGDH	NM_010956.3	NM_010956.3		18293	114796649	NM_010956.3	Ogdh	NP_035086.2	ILMN_2639805	000940168	S	3808	TCTGAGTACGGCCCAGAAGCTCCATTGGCTCCCAACGCCAGGCACTGCTG	11	+	6256290-6256339	11qA1	Mus musculus oxoglutarate dehydrogenase (lipoamide) (Ogdh), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]; Catalysis of the reaction: 2-oxoglutarate + CoA + NAD+ = succinyl-CoA + CO2 + NADH [goid 34602] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2-oxoglutarate + lipoamide = S-succinyldihydrolipoamide + CO2 [goid 4591] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]	2210412K19Rik; mKIAA4192; 2210403E04Rik; AA409584; KIAA4192; d1401	2210412K19Rik; mKIAA4192; 2210403E04Rik; AA409584; KIAA4192; d1401
Mus musculus	RefSeq	ILMN_244327	ILMN_244327	PEX10	NM_001042407.1	NM_001042407.1		668173	109150413	NM_001042407.1	Pex10	NP_001035866.1	ILMN_2941122	007100092	S	481	GCCACCCTGACTGAACAACAGAGGAAGGCCCTCCAGCGGGCAGTCTTCAT	4	+	154443026-154443075	4qE2	Mus musculus peroxisome biogenesis factor 10 (Pex10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm142; AV128229	Gm142; AV128229
Mus musculus	RefSeq	ILMN_197878	ILMN_244327	PEX10	NM_001042407.1	NM_001042407.1		668173	109150413	NM_001042407.1	Pex10	NP_001035866.1	ILMN_2529678	003310079	S	952	TGTCCCCTGTGCCGGGAGAAGTTTCCACCTCAGAAGCTGGTCTACCTGAG	4	+	154445820-154445869	4qE2	Mus musculus peroxisome biogenesis factor 10 (Pex10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm142; AV128229	Gm142; AV128229
Mus musculus	Riken	ILMN_202360	ILMN_202360	4930476L21RIK	ri|4930476L21|PX00032I20|AK015578|783					AK015578	4930476L21Rik		ILMN_2549008	001240491	S	1	GGGGACAGATTCCAGCCTAGGCTTTGGGAGGATCAAGAGAGCCCTGCTCT										
Mus musculus	RefSeq	ILMN_200145	ILMN_239951	GM536	XM_001001008.1	XM_001001008.1		224098	94400488	XM_001001008.1	Gm536	XP_001001008.1	ILMN_2537746	001980747	S	241	AGACGTCACCAGAGAAGTTTCTCTGTGCGGTGGACAATGGCTGATGAAGA				16qB2	PREDICTED: Mus musculus gene model 536, (NCBI) (Gm536), mRNA.					
Mus musculus	RefSeq	ILMN_201226	ILMN_201226	LOC384958	XM_357960.1	XM_357960.1			38089964	XM_357960.1	LOC384958		ILMN_1226958	007210296	S	579	GGGAAAACTCCCAGAGCTCCATGTTGAAGCATCCTGTGCCATTGCATCCA										
Mus musculus	MEEBO	ILMN_186856	ILMN_186856	FOXO3	scl38015.1_13				9789950	NM_019740	Foxo3		ILMN_2501865	003060735	S	3	CATTTAGCATGCGTGTGAGAGCGACAAACCACGTCTGCACCAGCTGGTCC						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Increase in size of antral follicles due to cell proliferation and/or growth of the antral cavity [goid 1547] [evidence IMP]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; Increase in size of primordial follicles including proliferation and shape changes of granulosa and/or theca cells until oocyte is surrounded by one layer of cuboidal shaped granulosa cells (primary follicle) [goid 1544] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186856	ILMN_186856	FOXO3	scl38015.1_13				9789950	NM_019740	Foxo3		ILMN_2439078	001340332	S	20	AATTATTTAAAAAGAAGAACAAGAATGTAAAAGTTGGTTCTGGTGAGATG						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Increase in size of antral follicles due to cell proliferation and/or growth of the antral cavity [goid 1547] [evidence IMP]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; Increase in size of primordial follicles including proliferation and shape changes of granulosa and/or theca cells until oocyte is surrounded by one layer of cuboidal shaped granulosa cells (primary follicle) [goid 1544] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214455	ILMN_214455	PDCD2	NM_008799.2	NM_008799.2		18567	120407032	NM_008799.2	Pdcd2	NP_032825.2	ILMN_2648170	003840348	S	914	CTGTTGAACCACCTGAAGGCAGACAGACTCGGCAGAAGCATCGACTGGGG	17	-	15658695-15658744	17qA2	Mus musculus programmed cell death 2 (Pdcd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Pcd2; RP-8; AI528543	Pcd2; RP-8; AI528543
Mus musculus	MEEBO	ILMN_220267	ILMN_220267	C430049B03RIK	scl54241.5.1_10				51772051	XM_489350	C430049B03Rik		ILMN_2719939	004050162	S	572	ATTCATTGTACTAGTTTCGAAAAACGGACATAATTTTAAATGAGAATACA										
Mus musculus	RefSeq	ILMN_204286	ILMN_223057	PLSCR4	NM_178711.3	NM_178711.3		235527	47578124	NM_178711.3	Plscr4	NP_848826.1	ILMN_1238566	004920437	S	358	TCGCTGGCGCCCACAACTTGTTTACCCTGCGTTTGGCTAGGGTTCAGGAC	9	+	92352573-92352622	9qE3.3	Mus musculus phospholipid scramblase 4 (Plscr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AV245873	AV245873
Mus musculus	RefSeq	ILMN_203418	ILMN_223057	PLSCR4	NM_178711.3	NM_178711.3		235527	47578124	NM_178711.3	Plscr4	NP_848826.1	ILMN_1234407	005820475	S	354	GGCTTCGCTGGCGCCCACAACTTGTTTACCCTGCGTTTGGCTAGGGTTCA	9	+	92352569-92352618	9qE3.3	Mus musculus phospholipid scramblase 4 (Plscr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AV245873	AV245873
Mus musculus	RefSeq	ILMN_217712	ILMN_217712	D6WSU116E	NM_026585.2	NM_026585.2		28006	141802662	NM_026585.2	D6Wsu116e	NP_080861.1	ILMN_2686697	004860431	S	4193	TTTACCCAATGTAGCTGATATTTTTCTGCATTGATTTTAATTATGCTTAA	6	+	116212609-116212658	6qE3	Mus musculus DNA segment, Chr 6, Wayne State University 116, expressed (D6Wsu116e), mRNA.				C530005J20Rik; A130095H06	C530005J20Rik; A130095H06
Mus musculus	RefSeq	ILMN_223604	ILMN_252343	2310003H01RIK	NM_027980.1	NM_027980.1		71885	73476380	NM_027980.1	2310003H01Rik	NP_082256.1	ILMN_1238640	000830075	S	2925	GAGGGGAGCGTGTCCACAGAGCTCTGTGCCTGCTCCTGTTGTCTGTCTGT	11	-	120230947-120230996	11qE2	Mus musculus RIKEN cDNA 2310003H01 gene (2310003H01Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	RP23-82I5.4	RP23-82I5.4
Mus musculus	Riken	ILMN_203602	ILMN_203602	ATP9B	ri|A930007M15|PX00065E15|AK044331|3039					AK044331	Atp9b		ILMN_1233770	002340221	S	2630	CTGTCAGCACAGCAGCCACACCCGATATTCACGATGGTCTTGGCAATATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199793	ILMN_199793	LOC383937	XM_357334.1	XM_357334.1			38077407	XM_357334.1	LOC383937		ILMN_1246523	001580022	S	545	ACAGGTTCCCCACCATCGCACACCAGGAAGCTAGGGCACTTCTGTCCTTG										
Mus musculus	RefSeq	ILMN_220676	ILMN_220676	ATP10A	NM_009728.1	NM_009728.1		11982	23510328	NM_009728.1	Atp10a	NP_033858.1	ILMN_2725188	000270180	S	4624	CAGGGACAAGTCACGGGCTACTTATAGTATCACCTCCGAAGGGCCACAGC	7	+	66084081-66084107:66084108-66084130	7qC	Mus musculus ATPase, class V, type 10A (Atp10a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	Atp10c; pfatp	Atp10c; pfatp
Mus musculus	Riken	ILMN_207344	ILMN_207344	9530048I18RIK	ri|9530048I18|PX00653D10|AK079240|1902					AK079240	9530048I18Rik		ILMN_1224990	003710504	S	1541	CCTGAACAGAGAGGGGACCAAACCCAGAGCACATCAGAAGCAGTCGCCTT										
Mus musculus	RefSeq	ILMN_213489	ILMN_213489	MTMR1	NM_016985.2	NM_016985.2		53332	57528446	NM_016985.2	Mtmr1	NP_058681.1	ILMN_1258620	001010470	S	4366	GCCTGCAGCACCCCTAAAAATGTCCACTGGATTTTAAAGAAGCACAACAG	X	+	68670318-68670367	XqA7.2	Mus musculus myotubularin related protein 1 (Mtmr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3-phosphate + H2O = 1-phosphatidyl-1D-myo-inositol + phosphate [goid 4438] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	AW049210	AW049210
Mus musculus	RefSeq	ILMN_196231	ILMN_313469	LOC100039479	XR_030801.1	XR_030801.1		100039479	149258314	XR_030801.1	LOC100039479		ILMN_1259857	003780037	S	1461	TTTTATTTTACATTTCCTTTGTGGAATCTCGTCTCTGGTTGAGGTATGTC	7|NT_166307.1	-	94296-94345		PREDICTED: Mus musculus similar to vomeronasal receptor V1RD8 (LOC100039479), misc RNA.					
Mus musculus	RefSeq	ILMN_184251	ILMN_313469	LOC100039479	XR_030801.1	XR_030801.1		100039479	149258314	XR_030801.1	LOC100039479		ILMN_1256964	006400050	S	321	ACATGTCAGTTCTCCTGTCTACAAATATGAATGTATATGTATGCAGAGCC	7|NT_166307.1	-	95436-95485		PREDICTED: Mus musculus similar to vomeronasal receptor V1RD8 (LOC100039479), misc RNA.					
Mus musculus	RefSeq	ILMN_184251	ILMN_313469	LOC100039479	XR_030801.1	XR_030801.1		100039479	149258314	XR_030801.1	LOC100039479		ILMN_2450137	001820440	S	1615	CACGTGACAGGGGGAGCCATTACAGAGGGACAGTAGGGTCAAAACATGTC	7|NT_166307.1	-	94142-94191		PREDICTED: Mus musculus similar to vomeronasal receptor V1RD8 (LOC100039479), misc RNA.					
Mus musculus	RefSeq	ILMN_257209	ILMN_257209	MAGEA2	NM_020016.1	NM_020016.1		17138	21426896	NM_020016.1	Magea2	NP_064400.1	ILMN_2824926	000670273	S	1296	ACAGAGTCACTGATTCCATTGCTGTACCCTCATTGGACAGCTGGGTGGAG	X	-	151462083-151462132	XqF3	Mus musculus melanoma antigen, family A, 2 (Magea2), mRNA.				Mage-a2; MGC151281; MGC124065	Mage-a2; MGC151281; MGC124065
Mus musculus	RefSeq	ILMN_198875	ILMN_261721	GM1815	XM_620647.3	XM_620647.3		211895	94383446	XM_620647.3	Gm1815	XP_620647.2	ILMN_1256538	001110441	S	942	TCCAGAGGACAAGGAGAGTGGGCAGGAGGAGGTTGACAGCATGGAGGTGA	8	-	42743044-42743093	8qA4	PREDICTED: Mus musculus gene model 1815, (NCBI) (Gm1815), mRNA.					
Mus musculus	RefSeq	ILMN_210770	ILMN_210770	5730557B15RIK	NM_027496.2	NM_027496.2		67434	118130374	NM_027496.2	5730557B15Rik	NP_081772.1	ILMN_2608985	002360348	S	1063	TCAGGATGACCACGAGCCTCTACAGTCCCGCTGTTGCTGTAGTCTGTCAG	15	-	31227398-31227447	15qB2	Mus musculus RIKEN cDNA 5730557B15 gene (5730557B15Rik), transcript variant 2, mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	0610012A05Rik	0610012A05Rik
Mus musculus	RefSeq	ILMN_198276	ILMN_255169	FAM170A	NM_001004061.1	NM_001004061.1		225497	51783960	NM_001004061.1	Fam170a	NP_001004061.1	ILMN_1214966	001410609	S	1086	GGACCACACCGAGGAAACCGAGAAACCCAAGGAAGAGAAGGCTGAGGAGC	18	+	50441773-50441822	18qD1	Mus musculus family with sequence similarity 170, member B (Fam170a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Znfd	Znfd
Mus musculus	RefSeq	ILMN_255169	ILMN_255169	FAM170A	NM_001004061.1	NM_001004061.1		225497	51783960	NM_001004061.1	Fam170a	NP_001004061.1	ILMN_2785742	004220707	S	866	CGGTTGAAGAGAGACCAAGGGCAAAGACACCTGACTGGCTCGTGACCATG	18	+	50441553-50441602	18qD1	Mus musculus family with sequence similarity 170, member B (Fam170a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Znfd	Znfd
Mus musculus	RefSeq	ILMN_194893	ILMN_235802	ACADSB	NM_025826.3	NM_025826.3		66885	146134921	NM_025826.3	Acadsb	NP_080102.1	ILMN_2614728	001450438	S	3192	AGTTCCCAGTTATGTTTTTAGGGGTAATAAAGTTCATGGCTGTTGGATCA				7qF3	Mus musculus acyl-Coenzyme A dehydrogenase, short/branched chain (Acadsb), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA];  [goid 16937] [evidence ISO]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	1300003O09Rik; BB066609	1300003O09Rik; BB066609
Mus musculus	RefSeq	ILMN_199125	ILMN_199125	LOC210535	XM_109910.1	XM_109910.1			20347291	XM_109910.1	LOC210535		ILMN_2534138	004150176	S	909	GGTCAGTTCATCTCATGTTCCTACTTCCCAGCAGTAGGGGAGAGCATGAC										
Mus musculus	RefSeq	ILMN_217489	ILMN_217489	RNF138	NM_019706.2	NM_019706.2		56515	46488938	NM_019706.2	Rnf138	NP_062680.2	ILMN_1220310	007050112	S	2783	GGATTGACTTTAGAATTTAATTTATGGGGGCGCACCTCAGTAGTCATGTT	18	+	21186505-21186554	18qA2	Mus musculus ring finger protein 138 (Rnf138), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	STRIN; Trif; Trif-d; 2410015A17Rik; 2810480D20Rik	STRIN; Trif; Trif-d; 2410015A17Rik; 2810480D20Rik
Mus musculus	RefSeq	ILMN_217489	ILMN_217489	RNF138	NM_019706.2	NM_019706.2		56515	46488938	NM_019706.2	Rnf138	NP_062680.2	ILMN_2683822	004050524	S	310	GAGGAACTTTCGGCGGCCACGTCCTACACGGAAGATGATTTCTACTGCCC	18	+	21160567-21160616	18qA2	Mus musculus ring finger protein 138 (Rnf138), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	STRIN; Trif; Trif-d; 2410015A17Rik; 2810480D20Rik	STRIN; Trif; Trif-d; 2410015A17Rik; 2810480D20Rik
Mus musculus	RefSeq	ILMN_217489	ILMN_217489	RNF138	NM_019706.2	NM_019706.2		56515	46488938	NM_019706.2	Rnf138	NP_062680.2	ILMN_1239527	002340288	S	308	CGAGGAACTTTCGGCGGCCACGTCCTACACGGAAGATGATTTCTACTGCC	18	+	21160565-21160614	18qA2	Mus musculus ring finger protein 138 (Rnf138), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	STRIN; Trif; Trif-d; 2410015A17Rik; 2810480D20Rik	STRIN; Trif; Trif-d; 2410015A17Rik; 2810480D20Rik
Mus musculus	Riken	ILMN_205123	ILMN_205123	E130319N12RIK	ri|E130319N12|PX00209A05|AK053904|1916					AK053904	E130319N12Rik		ILMN_1245919	001030047	S	1327	ACTGACCTTACTGTACTGGATTGAACTGTACTTAGTTGGCCTAAGGAGCA										
Mus musculus	RefSeq	ILMN_185962	ILMN_185962	YIF1A	NM_026553.2	NM_026553.2		68090	31980901	NM_026553.2	Yif1a	NP_080829.1	ILMN_2959787	004760014	S	1335	CCGAGAGGGTTCCAGAAAAGCCCAGAGCAAGTAGGGCAAGGCTCACAGTG	19	+	5092736-5092785	19qA	Mus musculus Yip1 interacting factor homolog A (S. cerevisiae) (Yif1a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		5330422J23Rik; Yif1p; 54TM; Yif1	5330422J23Rik; Yif1p; 54TM; Yif1
Mus musculus	RefSeq	ILMN_199647	ILMN_234185	LOC619941	XM_915939.2	XM_915939.2		619941	94366686	XM_915939.2	LOC619941	XP_921032.2	ILMN_1256086	002940392	S	46	CTGAGGTATCAGCCACCTTCGAGTGAGTGCAACCGGGCTTTGGATGACCC				2qE1	PREDICTED: Mus musculus similar to CGI-140 protein (LOC619941), mRNA.					
Mus musculus	RefSeq	ILMN_238323	ILMN_238323	OLFR1029	NM_001011852.1	NM_001011852.1		258154	58801461	NM_001011852.1	Olfr1029	NP_001011852.1	ILMN_3160249	005860392	S	921	AAACGTCATCAGGACAGCATTGATGCGTCCACCTTCCAACAAACTGCACC	2	+	85816322-85816371	2qD	Mus musculus olfactory receptor 1029 (Olfr1029), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR198-1P	MOR198-1P
Mus musculus	RefSeq	ILMN_211123	ILMN_211123	ARPC1B	NM_023142.1	NM_023142.1		11867	12963526	NM_023142.1	Arpc1b	NP_075631.1	ILMN_1227836	005870730	S	903	CTCCCAGCGTGGCATGACAGCCCGAGAGCGCTTCCAGAACCTGGACAAGA	5	+	145887684-145887733	5qG2	Mus musculus actin related protein 2/3 complex, subunit 1B (Arpc1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	SOP2Hs; AA408534; MGC102425; p41-ARC; AA408064; L72; AW208418; AF007010; 41kDa; AA571392	SOP2Hs; AA408534; MGC102425; p41-ARC; AA408064; L72; AW208418; AF007010; 41kDa; AA571392
Mus musculus	RefSeq	ILMN_211123	ILMN_211123	ARPC1B	NM_023142.1	NM_023142.1		11867	12963526	NM_023142.1	Arpc1b	NP_075631.1	ILMN_2860480	003120576	S	1112	GCCTGGAGTCAGCCTTGAAGGACCTGAAAATCAAATGAGCTGTGCAGACT	5	+	145888690-145888728:145888729-145888739	5qG2	Mus musculus actin related protein 2/3 complex, subunit 1B (Arpc1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	SOP2Hs; AA408534; MGC102425; p41-ARC; AA408064; L72; AW208418; AF007010; 41kDa; AA571392	SOP2Hs; AA408534; MGC102425; p41-ARC; AA408064; L72; AW208418; AF007010; 41kDa; AA571392
Mus musculus	RefSeq	ILMN_211123	ILMN_211123	ARPC1B	NM_023142.1	NM_023142.1		11867	12963526	NM_023142.1	Arpc1b	NP_075631.1	ILMN_2860479	001470309	S	1240	TCTAGGATGCAGTACACTGCTACAAAGGAAGAGGCAGGAGGGGAACTGCC	5	+	145888818-145888867	5qG2	Mus musculus actin related protein 2/3 complex, subunit 1B (Arpc1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	SOP2Hs; AA408534; MGC102425; p41-ARC; AA408064; L72; AW208418; AF007010; 41kDa; AA571392	SOP2Hs; AA408534; MGC102425; p41-ARC; AA408064; L72; AW208418; AF007010; 41kDa; AA571392
Mus musculus	MEEBO	ILMN_216664	ILMN_216664	1600020E01RIK	scl29797.1_34				51712491	XM_489143	1600020E01Rik		ILMN_2673802	003800092	S	1357	GTACAGGTGGTGCTGTAACTGATTTAAGATTGTTATGCCTAATAAGCCAT										
Mus musculus	RefSeq	ILMN_218564	ILMN_218564	ATAD3A	NM_179203.1	NM_179203.1		108888	30725844	NM_179203.1	Atad3a	NP_849534.1	ILMN_2826709	006270059	S	2327	GCATCCAAGCGTCAGAACTACCGCCTTCCCTCTACTGAGTCCGGGCCTTT	4	-	154584477-154584526	4qE2	Mus musculus ATPase family, AAA domain containing 3A (Atad3a), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	KIAA1273; Tob3; 2400004H09Rik; mKIAA1273	KIAA1273; Tob3; 2400004H09Rik; mKIAA1273
Mus musculus	RefSeq	ILMN_234838	ILMN_234838	AMY2-2	NM_001042711.1	NM_001042711.1		109959	111607466	NM_001042711.1	Amy2-2	NP_001036176.1	ILMN_2933478	002490202	S	1	GGACAACTTCAAAGCAAAATGAAGTTCGTTCTGCTGCTTTCCCTCATTGG				3qF3	Mus musculus amylase 2-2, pancreatic (Amy2-2), mRNA.					
Mus musculus	RefSeq	ILMN_212817	ILMN_212817	RECQL	NM_023042.2	NM_023042.2		19691	110625689	NM_023042.2	Recql	NP_075529.2	ILMN_2721621	003290356	S	1264	ATTCAATGAGCAAATCCATGGAGAATTACTATCAAGAGAGCGGGCGTGCC	6	-	142315794-142315843	6qG2	Mus musculus RecQ protein-like (Recql), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	RecQ1; AI957250	RecQ1; AI957250
Mus musculus	RefSeq	ILMN_212817	ILMN_212817	RECQL	NM_023042.2	NM_023042.2		19691	110625689	NM_023042.2	Recql	NP_075529.2	ILMN_2630681	000780010	S	2363	CTGAGCAATGTAGATGACTTCTAGTGAGAAGAGTTGCTGTTATAATTCAG	6	-	142310872-142310921	6qG2	Mus musculus RecQ protein-like (Recql), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	RecQ1; AI957250	RecQ1; AI957250
Mus musculus	RefSeq	ILMN_195913	ILMN_212817	RECQL	NM_023042.2	NM_023042.2		19691	110625689	NM_023042.2	Recql	NP_075529.2	ILMN_2519897	001070373	S	2046	CTCAAGCATCATCAAGTTTTCTTTTCTTAGCGCCTGCGTTCTTAGAGCCA	6	-	142311189-142311238	6qG2	Mus musculus RecQ protein-like (Recql), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	RecQ1; AI957250	RecQ1; AI957250
Mus musculus	RefSeq	ILMN_212817	ILMN_212817	RECQL	NM_023042.2	NM_023042.2		19691	110625689	NM_023042.2	Recql	NP_075529.2	ILMN_1249655	006980528	S	1992	CCATCTGGCTCTAAGAACGCAGGCGCTAAGAAAAGAAAACTTGATGATGC	6	-	142311243-142311292	6qG2	Mus musculus RecQ protein-like (Recql), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	RecQ1; AI957250	RecQ1; AI957250
Mus musculus	RefSeq	ILMN_209098	ILMN_209098	SLC10A3	NM_145406.1	NM_145406.1		214601	21703811	NM_145406.1	Slc10a3	NP_663381.1	ILMN_1236161	005270500	S	1626	GTGGTACCTCCGAGATGTTGGCTTTGGTTATTGGCCAGTTCATCTATAGC	X	-	71616562-71616611	XqA7.3	Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 3 (Slc10a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	MGC38638; P3; DXS253Eh; MGC36271; DXHXS253E; DXSmhG28	MGC38638; P3; DXS253Eh; MGC36271; DXHXS253E; DXSmhG28
Mus musculus	RefSeq	ILMN_186301	ILMN_186301	TPBPA	NM_009411.4	NM_009411.4		21984	148747477	NM_009411.4	Tpbpa	NP_033437.2	ILMN_2434359	003390523	S	867	TAGGTGGATAAGACATAGTTCTGTGTGAAGGCATAATTAACTGTGTGCTG				13qB2	Mus musculus trophoblast specific protein alpha (Tpbpa), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tb1; Tpbp; Tb-1; AV033951; MGC117542; 4311	Tb1; Tpbp; Tb-1; AV033951; MGC117542; 4311
Mus musculus	RefSeq	ILMN_199702	ILMN_199702	LOC383841	XM_357288.1	XM_357288.1			38076254	XM_357288.1	LOC383841		ILMN_1241729	006590288	S	164	ATCATCCCTTAGACACGATGGTGAAGTTGGCAGAGTGGAGACCGTTGCCC										
Mus musculus	Riken	ILMN_204360	ILMN_204360	2310002A08RIK	ri|C430015A15|PX00078J15|AK049465|2089					AK049465	2310002A08Rik		ILMN_1221687	000770170	S	1789	TCTTACTGTGACACTGGGAAGCTCGGTCCTGAACTCACTGGCGGGCTTTC										
Mus musculus	RefSeq	ILMN_210314	ILMN_210314	NKRF	NM_029891.2	NM_029891.2		77286	78191783	NM_029891.2	Nkrf	NP_084167.2	ILMN_2604358	007400187	S	2958	GAACTGTTTGTTCTTGGTGCCTTGCAGAGAGACTCAGAGCAACTCTCCAT	X	-	34427795-34427844	XqA3.3	Mus musculus NF-kappaB repressing factor (Nkrf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C80287; 9430034D17Rik; AW124770	C80287; 9430034D17Rik; AW124770
Mus musculus	RefSeq	ILMN_201059	ILMN_201059	LOC381977	XM_356013.1	XM_356013.1			38088390	XM_356013.1	LOC381977		ILMN_1214423	007550672	S	23	CAAAGGCTGAGATGCTGTTTATCAGTTCCCAGGTCCTGATCAGCTCTTCC										
Mus musculus	RefSeq	ILMN_215340	ILMN_215340	MATN1	NM_010769.1	NM_010769.1		17180	6857809	NM_010769.1	Matn1	NP_034899.1	ILMN_1219993	004280487	S	1774	CGCAGGGAAGAGGTGTGTGAGCGACTGCGTTCGTTATTTTTCCAACCTAA	4	+	130511202-130511251	4qD2.3	Mus musculus matrilin 1, cartilage matrix protein 1 (Matn1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	matrilin-1; Crtm; CMP; Mat1	matrilin-1; Crtm; CMP; Mat1
Mus musculus	RefSeq	ILMN_213807	ILMN_213807	SPIRE2	NM_172287.2	NM_172287.2		234857	31982562	NM_172287.2	Spire2	NP_758491.1	ILMN_2640995	005860010	S	2125	GGATGTCCTCAATGCCACTCCACGACGAAGCCGTCAGACCCAGTCCCTCT	8	+	125893210-125893259	8qE1	Mus musculus spire homolog 2 (Drosophila) (Spire2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC31610; BC026502; Spir2; Spir-2	MGC31610; BC026502; Spir2; Spir-2
Mus musculus	RefSeq	ILMN_237005	ILMN_237005	WDR47	NM_181400.2	NM_181400.2		99512	31341022	NM_181400.2	Wdr47	NP_852065.1	ILMN_2934399	005570278	S	3616	CCCTCCCTTCCAAACAGCACTGTAGAAGCAGAGCGGCAGCTGTTACGTGG	3	+	108448169-108448218	3qF3	Mus musculus WD repeat domain 47 (Wdr47), mRNA.				AA552998; mKIAA0893; 1810073M12Rik	AA552998; mKIAA0893; 1810073M12Rik
Mus musculus	Riken	ILMN_202092	ILMN_202092	SERPINF1	ri|2700051P09|ZX00063N03|AK012411|606					AK012411	Serpinf1		ILMN_1257789	007210132	S	481	CCAGAATTGTGTTTGAGAGGAGTCAGTAGCCCCACCCCCACCCCACCTTT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IDA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189505	ILMN_189505	C730036B14RIK	scl42415.1.1_153				54112417	NM_178912	C730036B14Rik		ILMN_2461868	004480619	S	17	ATACGGGGTTAAGATACATAACTTCGTGACCCCAGGACAAGCATTCAGTC										
Mus musculus	RefSeq	ILMN_216818	ILMN_216818	HOXB6	NM_008269.1	NM_008269.1		15414	21886812	NM_008269.1	Hoxb6	NP_032295.1	ILMN_2675708	001570220	S	911	CCACCTTGGCCTCATCAGGCTCTCTGGTGAGAACTGAGAATCGGACTCAC	11	+	96162472-96162521	11qD	Mus musculus homeo box B6 (Hoxb6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process of regulating the production and elimination of erythrocytes within an organism [goid 34101] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hox-2.2	Hox-2.2
Mus musculus	RefSeq	ILMN_237065	ILMN_237065	6030408B16RIK	NM_001033182.1	NM_001033182.1		77717	85701687	NM_001033182.1	6030408B16Rik	NP_001028354.1	ILMN_3049778	003520390	I	861	GTTCTGAGTGTGTGGTCTGTTTCCAGCCCTTGACCCTTGGGATTCTTGGT	15	+	101124354-101124403	15qF2	Mus musculus RIKEN cDNA 6030408B16 gene (6030408B16Rik), mRNA.				AI225877	AI225877
Mus musculus	RefSeq	ILMN_237065	ILMN_237065	6030408B16RIK	NM_001033182.1	NM_001033182.1		77717	85701687	NM_001033182.1	6030408B16Rik	NP_001028354.1	ILMN_3125764	004590451	A	758	CGAGAACCTGGAACTGTTTCCCATCTGGAGAGTGTGTCAGCCATCCAGCA	15	+	101124251-101124300	15qF2	Mus musculus RIKEN cDNA 6030408B16 gene (6030408B16Rik), mRNA.				AI225877	AI225877
Mus musculus	RefSeq	ILMN_211958	ILMN_211958	KIF3A	NM_008443.3	NM_008443.3		16568	124517729	NM_008443.3	Kif3a	NP_032469.2	ILMN_2621148	003310653	S	2820	GGCTTACATTCTGAAGATGCAGTTTGTGTGCTCGCCTGTGCACCCTCCAC	11	+	53406708-53406757	11qB1.3	Mus musculus kinesin family member 3A (Kif3a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Kns3; AW124694; Kifl; Kif3	Kns3; AW124694; Kifl; Kif3
Mus musculus	RefSeq	ILMN_211958	ILMN_211958	KIF3A	NM_008443.3	NM_008443.3		16568	124517729	NM_008443.3	Kif3a	NP_032469.2	ILMN_2765513	007000017	S	1206	GGACCCAAAGGATGCTCTGCTCCGCCAGTTTCAGAAAGAAATCGAAGAGC	11	+	53392438-53392461:53392602-53392627	11qB1.3	Mus musculus kinesin family member 3A (Kif3a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Kns3; AW124694; Kifl; Kif3	Kns3; AW124694; Kifl; Kif3
Mus musculus	RefSeq	ILMN_194887	ILMN_211958	KIF3A	NM_008443.3	NM_008443.3		16568	124517729	NM_008443.3	Kif3a	NP_032469.2	ILMN_2510541	004920400	S	3953	TAAGCTAAAACATGAGAGAAATTAAATCTAGTTAAATCAGTAACACAAGT	11	+	53411277-53411290:53411461-53411496	11qB1.3	Mus musculus kinesin family member 3A (Kif3a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Kns3; AW124694; Kifl; Kif3	Kns3; AW124694; Kifl; Kif3
Mus musculus	RefSeq	ILMN_200999	ILMN_200999	LOC385532	XM_358272.1	XM_358272.1			38087854	XM_358272.1	LOC385532		ILMN_2540744	002360601	S	3	GGCTAAGCATTTTCTGACTAGCTTTGAGAGAACAGCATGTTCCAAGGCCC										
Mus musculus	RefSeq	ILMN_208820	ILMN_208820	ANKRD16	NM_177268.2	NM_177268.2		320816	31343209	NM_177268.2	Ankrd16	NP_796242.1	ILMN_1258280	006650747	S	1846	GGGTATAACCTCTACCCACACATACAAACGTGGTCCACATGCAAACGTGT	2	+	11702823-11702872	2qA1	Mus musculus ankyrin repeat domain 16 (Ankrd16), mRNA. XM_001003070 XM_001003077			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI646698; D430029B21Rik; 2810455F06Rik	AI646698; D430029B21Rik; 2810455F06Rik
Mus musculus	MEEBO	ILMN_217429	ILMN_217429	ANG1	scl011727.2_300				40254650	NM_007447	Ang1		ILMN_2683113	004390440	S	599	GTCAGGGGCCAGAAAAACGAACTATCTAAAACATATGTCTCCTGATTTGC										
Mus musculus	RefSeq	ILMN_210569	ILMN_327610	2410088K16RIK	XM_001473750.1	XM_001473750.1		78650	149240633	XM_001473750.1	2410088K16Rik	XP_001473800.1	ILMN_2606937	007200730	S	147	CAACATGATGGGCTGACAGATAATGTCTTTCTCGCTGGAGGTCTTGGCCA				1qD	PREDICTED: Mus musculus RIKEN cDNA 2410088K16 gene (2410088K16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219364	ILMN_219364	CST8	NM_009978.2	NM_009978.2		13012	142345059	NM_009978.2	Cst8	NP_034108.1	ILMN_2707745	007000291	S	578	GGCGAGTTCAACCTGTTGAGCAAAGAATGTAAAGATGTCTAAGGGTGTCT	2	+	148631195-148631236:148631237-148631244	2qG3	Mus musculus cystatin 8 (cystatin-related epididymal spermatogenic) (Cst8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	Cst-rs1; Cres	Cst-rs1; Cres
Mus musculus	RefSeq	ILMN_192808	ILMN_192808	ZKSCAN3	NM_023685.3	NM_023685.3		72739	141802779	NM_023685.3	Zkscan3	NP_076174.2	ILMN_2491526	002490377	S	2363	CCTTAAACAGCTTTCTTAGCATTAAATCATTGTGAATGTGCCACCCATGG	13	-	21479016-21479065	13qA3.1	Mus musculus zinc finger with KRAB and SCAN domains 3 (Zkscan3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AA408594; Zfp307; mszf35; AI132359; 2810435N07Rik; Skz1; Zfp306	AA408594; Zfp307; mszf35; AI132359; 2810435N07Rik; Skz1; Zfp306
Mus musculus	RefSeq	ILMN_240413	ILMN_240413	SPCS3	NM_029701.1	NM_029701.1		76687	125988402	NM_029701.1	Spcs3	NP_083977.1	ILMN_2787085	003780717	S	3130	GGGGCCTGGGAGTGGAGAGTCTGCTTTCAGATACTTTAACCTCGGAGCTG	8	-	55606072-55606121	8qB1.3	Mus musculus signal peptidase complex subunit 3 homolog (S. cerevisiae) (Spcs3), mRNA.				1810011E08Rik	1810011E08Rik
Mus musculus	RefSeq	ILMN_202519	ILMN_240413	SPCS3	NM_029701.1	NM_029701.1		76687	125988402	NM_029701.1	Spcs3	NP_083977.1	ILMN_1242700	005700537	S	517	GTCACTCTGACGCTCTCCTGGAACGTTGTACCAAACGCTGGAATTCTACC	8	-	55608685-55608734	8qB1.3	Mus musculus signal peptidase complex subunit 3 homolog (S. cerevisiae) (Spcs3), mRNA.				1810011E08Rik	1810011E08Rik
Mus musculus	RefSeq	ILMN_200834	ILMN_226028	LOC635806	XR_002601.1	XR_002601.1		635806	94408970	XR_002601.1	LOC635806		ILMN_1226098	001690373	S	181	TCACCTCTGCAACTTCCTGGAGCAGCACTGTCTGGGCGAGCAGGCCAATG					PREDICTED: Mus musculus hypothetical LOC635806 (LOC635806), mRNA.					
Mus musculus	MEEBO	ILMN_211865	ILMN_211865	NFASC	scl0269116.1_30	NM_182716.2			40286647	NM_182716.2	Nfasc		ILMN_2620223	000730382	S	3834	CACCATCAAGCAGCAGGAGAGCGATGACAGCCTGGTGGACTATGGCGAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213729	ILMN_213729	OLFR1308	NM_207151.1	NM_207151.1		258258	46391064	NM_207151.1	Olfr1308	NP_997034.1	ILMN_2640178	006840148	S	666	ATTTATTGTCCATAAACACTCTTCAAGTGGTTCCTCCAAGGCTTTGTCTA	2	-	111800513-111800562	2qE3	Mus musculus olfactory receptor 1308 (Olfr1308), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR245-22; MGC123833	MOR245-22; MGC123833
Mus musculus	MEEBO	ILMN_211459	ILMN_211459	SPINK5	scl52014.32.1_3	XM_283487.1			28524302	XM_283487.1	Spink5		ILMN_2616118	004570328	S	4345	GACTGACCCATTTGGATCTAGGAAGTTAATTTTGTATTTTCTCTCTGCTC							Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45861] [evidence IMP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IMP]		
Mus musculus	RefSeq	ILMN_202061	ILMN_250624	SFT2D3	XM_907118.2	XM_907118.2		67158	94404764	XM_907118.2	Sft2d3	XP_912211.1	ILMN_1256458	002320754	S	2362	AGGCATACATGTCCAGCTGAGGTTAAGACCCATATCTGAGCACTGGCTTG				18qB1	PREDICTED: Mus musculus SFT2 domain containing 3 (Sft2d3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_189904	ILMN_250624	SFT2D3	XM_907118.2	XM_907118.2		67158	94404764	XM_907118.2	Sft2d3	XP_912211.1	ILMN_1238927	002490273	S	3130	CCAGCTGTTTGTCCCGTGAAGACAGGTTTACTTGGCAAGTTGAGTGGTGC				18qB1	PREDICTED: Mus musculus SFT2 domain containing 3 (Sft2d3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_199608	ILMN_318362	LOC100046853	XM_001476909.1	XM_001476909.1		100046853	149264564	XM_001476909.1	LOC100046853	XP_001476959.1	ILMN_1234314	000780328	S	299	GTCAGCGTCATCTCCTCCAGGAACACTGGCCAGTACCAACATTATAAAGG					PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein K (LOC100046853), mRNA.					
Mus musculus	RefSeq	ILMN_213340	ILMN_213340	FADD	NM_010175.4	NM_010175.4		14082	145966892	NM_010175.4	Fadd	NP_034305.1	ILMN_2662509	001230347	S	1446	GCAGGGGCCCTGACTGCCACACTTGGAGCCCAATAAACCATTGTCTCAGC				7qF5	Mus musculus Fas (TNFRSF6)-associated via death domain (Fadd), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mort1/FADD	Mort1/FADD
Mus musculus	RefSeq	ILMN_213340	ILMN_213340	FADD	NM_010175.4	NM_010175.4		14082	145966892	NM_010175.4	Fadd	NP_034305.1	ILMN_1223126	006450050	S	1374	CAGGCTGACTGAGGTGTGCTTACAGCCCTGGGTGCTAGTTGTGAATGGAG				7qF5	Mus musculus Fas (TNFRSF6)-associated via death domain (Fadd), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mort1/FADD	Mort1/FADD
Mus musculus	RefSeq	ILMN_186660	ILMN_315524	LOC546090	XR_032463.1	XR_032463.1		546090	149258994	XR_032463.1	LOC546090		ILMN_1236599	000050612	S	397	TATGCCCACGGGGGCTTGGATTCCAACGGGAAGCCAGCAGATGCAGTCTA	8	-	99952843-99952892	8qD1	PREDICTED: Mus musculus similar to mKIAA4115 protein (LOC546090), misc RNA.					
Mus musculus	Riken	ILMN_205458	ILMN_205458	A330040H08RIK	ri|A330040H08|PX00131M06|AK039405|726					AK039405	A330040H08Rik		ILMN_1221194	000060142	S	554	CCAGGAGTGTTGACAGGCTGAGAGTTGCGGTAGAGTGTAGAAATACCCCC										
Mus musculus	Riken	ILMN_202877	ILMN_202877	A130065C13RIK	ri|A130065C13|PX00124A20|AK037935|681					AK037935	A130065C13Rik		ILMN_1227203	003930370	S	528	AATACATTGCCGGGTGGTAGTGGTGAACGCCGTTAGTCTCAGCACTTGGG										
Mus musculus	RefSeq	ILMN_199684	ILMN_199684	LOC383813	XM_357273.1	XM_357273.1			38076021	XM_357273.1	LOC383813		ILMN_1225778	000150246	S	11	CGAGAGAAGGGAGTCTAGCAAGCACAGTATCAGCAGCCAAGAGGGTGGAG										
Mus musculus	RefSeq	ILMN_193280	ILMN_225508	NUPL2	NM_153092.3	NM_153092.3		231042	142379823	NM_153092.3	Nupl2	NP_694732.2	ILMN_2712994	003830739	S	1589	TTCTACCTGACCCATACTCCTCCCTAACTATGGCTTCTGAGATTGACTTG	5	+	23688506-23688555	5qA3	Mus musculus nucleoporin like 2 (Nupl2), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AV116043; CG1; NLP-1; Nlp1	AV116043; CG1; NLP-1; Nlp1
Mus musculus	RefSeq	ILMN_213118	ILMN_228424	TAGAP1	NM_147155.2	NM_147155.2		380608	148228284	NM_147155.2	Tagap1	NP_671511.2	ILMN_2741383	003190754	S	1741	TATGCAAGGTATTAGATGCAAAGGGTGTCTGCGTACATCCCTTCATGCAT				17qA1	Mus musculus T-cell activation GTPase activating protein 1 (Tagap1), mRNA.				FKSG15; 2610315E15Rik; AA415005	FKSG15; 2610315E15Rik; AA415005
Mus musculus	RefSeq	ILMN_222427	ILMN_222427	PLEKHO2	NM_153119.2	NM_153119.2		102595	26986535	NM_153119.2	Plekho2	NP_694759.1	ILMN_2749448	007330392	S	3024	CCCTACAGCAACAAGGGTGCTGTACTTCTTCCAAGTCACCTGCTTCCAGG	9	-	65402390-65402439	9qC	Mus musculus pleckstrin homology domain containing, family O member 2 (Plekho2), mRNA.				AI840980; MGC30448	AI840980; MGC30448
Mus musculus	RefSeq	ILMN_195608	ILMN_237937	MRPS12	NM_011885.3	NM_011885.3		24030	141803235	NM_011885.3	Mrps12	NP_036015.1	ILMN_1254734	001450379	S	465	CACAGTGGTCTGGCACTCGATCCTTGGAAACGGGTTCTTCCTACTCCCGG	7	-	29524829-29524878	7qA3	Mus musculus mitochondrial ribosomal protein S12 (Mrps12), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	Rpms12; AI327385; rps12	Rpms12; AI327385; rps12
Mus musculus	MEEBO	ILMN_195047	ILMN_195047	4930581F22RIK	scl37135.8.1_9						4930581F22Rik		ILMN_2512092	005050561	S	16	CTTCAGTCCAGAGGGTTTGCCTACCTCACAACTACTTTGCAGGACAGACC										
Mus musculus	RefSeq	ILMN_222856	ILMN_228237	CYP2J13	NM_145548.4	NM_145548.4		230459	146149155	NM_145548.4	Cyp2j13	NP_663523.2	ILMN_2777576	002350735	S	1491	GCCACCAGCCAATGAGAACCTGAGTCTGAAGTTCAGATTAGGCATCACCA				4qC5	Mus musculus cytochrome P450, family 2, subfamily j, polypeptide 13 (Cyp2j13), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_214178	ILMN_214178	LYPD1	NM_145100.3	NM_145100.3		72585	126352408	NM_145100.3	Lypd1	NP_659568.2	ILMN_1239134	006020358	S	1839	CGGTACCAATCTTTCAGCTCTGTGCTTGTCGGCTTCTTTTTGCCACTGGC	1	-	127768774-127768823	1qE3	Mus musculus Ly6/Plaur domain containing 1 (Lypd1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			Lynx2; Lypdc1; AI853408; 2700050C12Rik; C530008O16Rik	Lynx2; Lypdc1; AI853408; 2700050C12Rik; C530008O16Rik
Mus musculus	RefSeq	ILMN_191340	ILMN_214178	LYPD1	NM_145100.3	NM_145100.3		72585	126352408	NM_145100.3	Lypd1	NP_659568.2	ILMN_1253365	004480754	S	988	GGAGGGTCTGGACTTTCTGCTCCATGCTTTTTTCTTCAACTACACACAGA	1	-	127769625-127769674	1qE3	Mus musculus Ly6/Plaur domain containing 1 (Lypd1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			Lynx2; Lypdc1; AI853408; 2700050C12Rik; C530008O16Rik	Lynx2; Lypdc1; AI853408; 2700050C12Rik; C530008O16Rik
Mus musculus	RefSeq	ILMN_220946	ILMN_321397	LOC100047028	XM_001478311.1	XM_001478311.1		100047028	149262309	XM_001478311.1	LOC100047028	XP_001478361.1	ILMN_2728997	004220086	S	2206	GCTCAATCTTGTGCCCTAGTCTTTTAAATGGCCTCAGTTTATTAATATAG					PREDICTED: Mus musculus similar to heterochromatin protein 1 beta (LOC100047028), mRNA.					
Mus musculus	RefSeq	ILMN_186155	ILMN_321397	LOC100047028	XM_001478311.1	XM_001478311.1		100047028	149262309	XM_001478311.1	LOC100047028	XP_001478361.1	ILMN_2433075	001110333	S	1845	TATTGTCTAGACCTACAAATAGAACTACATTGTAAAATCTTTTTCAGCAT					PREDICTED: Mus musculus similar to heterochromatin protein 1 beta (LOC100047028), mRNA.					
Mus musculus	RefSeq	ILMN_215657	ILMN_215657	ANKRD29	XM_129028.6	XM_129028.6		225187	149269652	XM_129028.6	Ankrd29	XP_129028.5	ILMN_2662106	001580064	S	1018	GGCCACAGTGTCCAGAAAGAAATGGTTCTTAACAATGTTGGAAATGAAGA	18	-	12413045-12413094	18qA1	PREDICTED: Mus musculus ankyrin repeat domain 29 (Ankrd29), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_186935	ILMN_186935	TRPT1	NM_153597.1	NM_153597.1		107328	23956403	NM_153597.1	Trpt1	NP_705825.1	ILMN_2885981	005420524	S	607	GGTGTCATCAGCGGCATTCGTCCAAATTGTGAGGTGGCGGTGTTCATCGA	19	+	7072844-7072856:7072999-7073035	19qA	Mus musculus tRNA phosphotransferase 1 (Trpt1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Splicing of tRNA substrates via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons [goid 6388] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: 2'-phospho-[ligated tRNA] + NAD+ = mature tRNA + ADP ribose 1'',2''-phosphate + nicotinamide + H2O; transfers the splice junction 2-phosphate from ligated tRNA to NAD+ to produce ADP-ribose 1'-2' cyclic phosphate [goid 215] [evidence IEA]; Catalysis of the transfer of a phosphate group from one compound to the 2' position of another [goid 8665] [evidence IDA]; Catalysis of the transfer of a phosphate group from one compound to the 2' position of another [goid 8665] [evidence IGI]	MGC41710; AW045591; AU079016; Tpt1h; TPT1	MGC41710; AW045591; AU079016; Tpt1h; TPT1
Mus musculus	RefSeq	ILMN_186935	ILMN_186935	TRPT1	NM_153597.1	NM_153597.1		107328	23956403	NM_153597.1	Trpt1	NP_705825.1	ILMN_2480638	001400504	S	213	TAAGGCTCTGTCCTATGCCCTTCGCCACGGGGCCTTGAAGCTGGGACTTC	19	+	7071206-7071255	19qA	Mus musculus tRNA phosphotransferase 1 (Trpt1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Splicing of tRNA substrates via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons [goid 6388] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: 2'-phospho-[ligated tRNA] + NAD+ = mature tRNA + ADP ribose 1'',2''-phosphate + nicotinamide + H2O; transfers the splice junction 2-phosphate from ligated tRNA to NAD+ to produce ADP-ribose 1'-2' cyclic phosphate [goid 215] [evidence IEA]; Catalysis of the transfer of a phosphate group from one compound to the 2' position of another [goid 8665] [evidence IDA]; Catalysis of the transfer of a phosphate group from one compound to the 2' position of another [goid 8665] [evidence IGI]	MGC41710; AW045591; AU079016; Tpt1h; TPT1	MGC41710; AW045591; AU079016; Tpt1h; TPT1
Mus musculus	RefSeq	ILMN_186935	ILMN_186935	TRPT1	NM_153597.1	NM_153597.1		107328	23956403	NM_153597.1	Trpt1	NP_705825.1	ILMN_2885982	007650546	S	764	AGGCCCTGCAGCTTCGACCTACACGAAAGCCTCTCTCCTTGGCTGGTGAT	19	+	7073235-7073258:7073382-7073407	19qA	Mus musculus tRNA phosphotransferase 1 (Trpt1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Splicing of tRNA substrates via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons [goid 6388] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: 2'-phospho-[ligated tRNA] + NAD+ = mature tRNA + ADP ribose 1'',2''-phosphate + nicotinamide + H2O; transfers the splice junction 2-phosphate from ligated tRNA to NAD+ to produce ADP-ribose 1'-2' cyclic phosphate [goid 215] [evidence IEA]; Catalysis of the transfer of a phosphate group from one compound to the 2' position of another [goid 8665] [evidence IDA]; Catalysis of the transfer of a phosphate group from one compound to the 2' position of another [goid 8665] [evidence IGI]	MGC41710; AW045591; AU079016; Tpt1h; TPT1	MGC41710; AW045591; AU079016; Tpt1h; TPT1
Mus musculus	RefSeq	ILMN_258364	ILMN_258364	CNGA4	NM_001033317.1	NM_001033317.1		233649	84370303	NM_001033317.1	Cnga4	NP_001028489.1	ILMN_2875896	002100189	S	2201	GGAGGTCGCTGGTATAGGAGGACAAGGACAGTGTGAAGCTACAGGGAAAG	7	+	105282280-105282329	7qE3	Mus musculus cyclic nucleotide gated channel alpha 4 (Cnga4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence TAS]	MGC130316	MGC130316
Mus musculus	RefSeq	ILMN_210293	ILMN_226714	4930455F16RIK	XM_986656.1	XM_986656.1		76397	94400353	XM_986656.1	4930455F16Rik	XP_991750.1	ILMN_1232624	000780039	S	501	CGATGAATTCAGCTGTATACCTAACTTGAGGATTCGGGTCTTCAGATGGC					PREDICTED: Mus musculus RIKEN cDNA 4930455F16 gene (4930455F16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187008	ILMN_187008	ZFP647	NM_172817.1	NM_172817.1		239546	27370219	NM_172817.1	Zfp647	NP_766405.1	ILMN_1226801	003870324	S	1	GTCAGAAGCCCGCACTTAGAACATGCACAAGACCTAAACAGCCTTCCTCC	15	-	76752653-76752702	15qD3	Mus musculus zinc finger protein 647 (Zfp647), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	6030449J21; Es492	6030449J21; Es492
Mus musculus	RefSeq	ILMN_209856	ILMN_209856	PBX2	NM_017463.2	NM_017463.2		18515	145386579	NM_017463.2	Pbx2	NP_059491.1	ILMN_2599858	006060646	S	2466	TGCCAAATACGCTAAATATGGGCTGGGTGCTTCTATATGTGTCTCCCCCA				17qB1	Mus musculus pre B-cell leukemia transcription factor 2 (Pbx2), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	G17; AU043397	G17; AU043397
Mus musculus	RefSeq	ILMN_209856	ILMN_209856	PBX2	NM_017463.2	NM_017463.2		18515	145386579	NM_017463.2	Pbx2	NP_059491.1	ILMN_1248852	002230086	S	1141	GAGACATGTTTCTGGGGATGCCCGGGCTCAATGGCGATTCCTACCCTGCT				17qB1	Mus musculus pre B-cell leukemia transcription factor 2 (Pbx2), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	G17; AU043397	G17; AU043397
Mus musculus	RefSeq	ILMN_192026	ILMN_257498	ANK3	NM_170687.3	NM_170687.3		11735	116256500	NM_170687.3	Ank3	NP_733788.2	ILMN_2484322	004290630	S	7309	CCCACCATGTTCTTCTTAGCCGTCACCTTGGGGCTCCATACAATGGAAGT	10	+	69489939-69489988	10qB5.3	Mus musculus ankyrin 3, epithelial (Ank3), transcript variant 6, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Ankyrin-3; AnkG; 2900054D09Rik; AI314020; Ank-3; MGC14049	Ankyrin-3; AnkG; 2900054D09Rik; AI314020; Ank-3; MGC14049
Mus musculus	RefSeq	ILMN_212062	ILMN_257498	ANK3	NM_170687.3	NM_170687.3		11735	116256500	NM_170687.3	Ank3	NP_733788.2	ILMN_1227817	006020176	S	3952	CCACTTGGTCATACTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGGA	10	+	69486582-69486631	10qB5.3	Mus musculus ankyrin 3, epithelial (Ank3), transcript variant 6, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Ankyrin-3; AnkG; 2900054D09Rik; AI314020; Ank-3; MGC14049	Ankyrin-3; AnkG; 2900054D09Rik; AI314020; Ank-3; MGC14049
Mus musculus	RefSeq	ILMN_212062	ILMN_257498	ANK3	NM_170687.3	NM_170687.3		11735	116256500	NM_170687.3	Ank3	NP_733788.2	ILMN_2622306	004060347	S	2900	TAGCATAGAGTCTCCCTTTAGGACCCCCAGTAGACTGAGTGACGGGCTGG	10	+	69464768-69464817	10qB5.3	Mus musculus ankyrin 3, epithelial (Ank3), transcript variant 6, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Ankyrin-3; AnkG; 2900054D09Rik; AI314020; Ank-3; MGC14049	Ankyrin-3; AnkG; 2900054D09Rik; AI314020; Ank-3; MGC14049
Mus musculus	RefSeq	ILMN_187079	ILMN_259692	C030010C08RIK	XM_977840.1	XM_977840.1		77329	94395200	XM_977840.1	C030010C08Rik	XP_982934.1	ILMN_2440986	003990100	S	1241	TAAGACTAGTAGACTATTTTCAAAGGAGTGCTATATTAAGAGTGTCACTT	13	-	63915578-63915627	13qB3	PREDICTED: Mus musculus RIKEN cDNA C030010C08 gene (C030010C08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_189821	ILMN_237866	AMMECR1L	NM_153515.3	NM_153515.3		225339	118130140	NM_153515.3	Ammecr1l	NP_705735.1	ILMN_1229706	006660608	S	3069	GGGAAGTGCTGATGACATTGGAATGCCCAGGATGCATGGCCCTTACTGCC	18	+	31942081-31942130	18qB1	Mus musculus AMME chromosomal region gene 1-like (Ammecr1l), mRNA.				MGC32132; AU040755; AU022236; AW111353; E230022H04Rik; 5430429D03Rik	MGC32132; AU040755; AU022236; AW111353; E230022H04Rik; 5430429D03Rik
Mus musculus	RefSeq	ILMN_229099	ILMN_229099	HK3	NM_001033245.3	NM_001033245.3		212032	146198855	NM_001033245.3	Hk3	NP_001028417.1	ILMN_3161013	004810575	S	2886	CACCGTCACCTTTTTGCAGTCGGAGGATGGGTCTGGCAAAGGCGCAGCTT				13qB1	Mus musculus hexokinase 3 (Hk3), nuclear gene encoding mitochondrial protein, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC143940	MGC143940
Mus musculus	RefSeq	ILMN_254618	ILMN_254618	4933429E10RIK	NM_001033542.1	NM_001033542.1		380701	85702044	NM_001033542.1	4933429E10Rik	NP_001028714.1	ILMN_3082420	006550670	A	2133	AGCTAGGCAAGAACTCTTAACACTGAGCACTCCGAGCACTCGCTCCCACC	11	-	61118020-61118069	11qB2	Mus musculus RIKEN cDNA 4933429E10 gene (4933429E10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_254618	ILMN_254618	4933429E10RIK	NM_001033542.1	NM_001033542.1		380701	85702044	NM_001033542.1	4933429E10Rik	NP_001028714.1	ILMN_3011926	005700053	I	714	AACGCCTTCTTGCTGTATGCCTTGGACCTCGGAGTGGTAGGGTCGGCCTG	11	-	61142076-61142089:61144723-61144758	11qB2	Mus musculus RIKEN cDNA 4933429E10 gene (4933429E10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216188	ILMN_246805	KCNH1	NM_001038607.1	NM_001038607.1		16510	84370249	NM_001038607.1	Kcnh1	NP_001033696.1	ILMN_2668260	004480279	S	3809	CATATGAGCTTCTCTCCGTCTCCCTCGACTGACCTTTTTCCAGGCTTGTC	1	+	194330787-194330836	1qH6	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 1 (Kcnh1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	M-eag; MGC124420; MGC124419	M-eag; MGC124420; MGC124419
Mus musculus	MEEBO	ILMN_211296	ILMN_211296	1700030J15RIK	scl070073.2_8	XM_135553.2			38093450	XM_135553.2	1700030J15Rik		ILMN_2614400	007000575	S	634	GCTTCCTCTTTGCCGTGGTGATGCTCTGCAGCCAAATGTGCGTCATCTAC										
Mus musculus	RefSeq	ILMN_208938	ILMN_208938	GPR153	NM_178406.2	NM_178406.2		100129	118130589	NM_178406.2	Gpr153	NP_848493.1	ILMN_2590975	000450743	S	3491	ATTCAATGGCAATACTTGTAGTGGGGACATAGTCCCCCTCAGTCACTCCT	4	+	151659160-151659209	4qE2	Mus musculus G protein-coupled receptor 153 (Gpr153), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	1110065N12Rik; AI449320; PGR1	1110065N12Rik; AI449320; PGR1
Mus musculus	RefSeq	ILMN_209530	ILMN_209530	GPR35	NM_022320.3	NM_022320.3		64095	142356082	NM_022320.3	Gpr35	NP_071715.2	ILMN_1221121	004760154	S	2578	CCCCTCCACCCTCTGTTCTGCAGTATTATCTAAACCTTCACCTTGGAAGG	1	+	94881531-94881580	1qD	Mus musculus G protein-coupled receptor 35 (Gpr35), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	KPG_007	KPG_007
Mus musculus	RefSeq	ILMN_197803	ILMN_197803	LOC277771	XM_205499.3	XM_205499.3			38078324	XM_205499.3	LOC277771		ILMN_2529417	006040195	S	1137	CTTGGTGCCTATTCACCAGATGGTACATTGGAGCCTGGTAGTAATCAACT										
Mus musculus	RefSeq	ILMN_232457	ILMN_232457	PIK3C2G	NM_207683.2	NM_207683.2		18705	46849778	NM_207683.2	Pik3c2g	NP_997566.1	ILMN_3082346	000290435	A	5914	CCAAAATCACAGTGGTCCTCCTGCCTCTGTTTCCCTATGGCTGGGACTCC				6qG2	Mus musculus phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide (Pik3c2g), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate [goid 35005] [evidence IEA]	C80387	C80387
Mus musculus	RefSeq	ILMN_232457	ILMN_232457	PIK3C2G	NM_207683.2	NM_207683.2		18705	46849778	NM_207683.2	Pik3c2g	NP_997566.1	ILMN_3011887	002970154	I	2910	AGTTTGAGTGGAACCTCGAAAGTCCCTTGGTGGAACTCCTGCCTCGTCGC	6	+	139906349-139906352:139916312-139916357	6qG2	Mus musculus phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide (Pik3c2g), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate [goid 35005] [evidence IEA]	C80387	C80387
Mus musculus	MEEBO	ILMN_187923	ILMN_187923	SCL0002602.1_34	scl0002602.1_34						scl0002602.1_34		ILMN_2448302	004540386	S	15	GGCGGGGGGATCATCTTCATCTCTCGGTTCTTACCTCAGCGTGTGACGAG										
Mus musculus	RefSeq	ILMN_196804	ILMN_196804	LOC210711	XM_146060.1	XM_146060.1			20844232	XM_146060.1	LOC210711		ILMN_1244548	001010070	S	1206	CTTAGCGTCACATAGAGCATTGTGTTTCCATCCTCCAGACAGAGCATGCC										
Mus musculus	RefSeq	ILMN_247107	ILMN_247107	TTC19	NM_029704.1	NM_029704.1		72795	110347532	NM_029704.1	Ttc19	NP_083980.1	ILMN_3141781	006110348	A	276	CGTCAGACGAGGCGGAGGCCGAGATCATCCAGCTGCTGAAGCAAGCCAAG	11	+	62095341-62095390	11qB2	Mus musculus tetratricopeptide repeat domain 19 (Ttc19), transcript variant 2, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2810460C24Rik; 2010204O13Rik; AI505442; RP23-330N10.4	2810460C24Rik; 2010204O13Rik; AI505442; RP23-330N10.4
Mus musculus	Riken	ILMN_204177	ILMN_204177	A830012I21RIK	ri|A830012I21|PX00153N09|AK043617|2480					AK043617	A830012I21Rik		ILMN_1232411	006520487	S	2378	CTTCACTTCCAGAGGATCTGATGCCTTCTTTTGACCTCCTTGGGTACCAG										
Mus musculus	RefSeq	ILMN_214522	ILMN_214522	NFS1	NM_010911.1	NM_010911.1		18041	6754845	NM_010911.1	Nfs1	NP_035041.1	ILMN_2978163	000130445	S	1578	AGGCTAGCTTTCCTAGCCTCGGCTCCTGTGTAGGCATGTATTCCGTAATC	2	-	155949797-155949846	2qH1	Mus musculus nitrogen fixation gene 1 (S. cerevisiae) (Nfs1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]	The incorporation of iron into a metallo-sulfur cluster [goid 18283] [evidence IDA]; The chemical reactions and pathways involving cysteine, 2-amino-3-mercaptopropanoic acid [goid 6534] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine [goid 31071] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	m-Nfs1; AA987187; m-Nfsl	m-Nfs1; AA987187; m-Nfsl
Mus musculus	RefSeq	ILMN_214522	ILMN_214522	NFS1	NM_010911.1	NM_010911.1		18041	6754845	NM_010911.1	Nfs1	NP_035041.1	ILMN_2648867	003190326	S	1310	ACTACACGGCGGAGAAGTGCATCCACCACGTGAAGCGCCTTCGAGAAATG	2	-	155951018-155951067	2qH1	Mus musculus nitrogen fixation gene 1 (S. cerevisiae) (Nfs1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]	The incorporation of iron into a metallo-sulfur cluster [goid 18283] [evidence IDA]; The chemical reactions and pathways involving cysteine, 2-amino-3-mercaptopropanoic acid [goid 6534] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine [goid 31071] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	m-Nfs1; AA987187; m-Nfsl	m-Nfs1; AA987187; m-Nfsl
Mus musculus	RefSeq	ILMN_214522	ILMN_214522	NFS1	NM_010911.1	NM_010911.1		18041	6754845	NM_010911.1	Nfs1	NP_035041.1	ILMN_1249158	000020603	S	1797	CTGAACTGGCGCCATTAGGGACTGGCATAAACAAACTTTATTTTAACCTT	2	-	155949578-155949627	2qH1	Mus musculus nitrogen fixation gene 1 (S. cerevisiae) (Nfs1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]	The incorporation of iron into a metallo-sulfur cluster [goid 18283] [evidence IDA]; The chemical reactions and pathways involving cysteine, 2-amino-3-mercaptopropanoic acid [goid 6534] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine [goid 31071] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	m-Nfs1; AA987187; m-Nfsl	m-Nfs1; AA987187; m-Nfsl
Mus musculus	RefSeq	ILMN_209788	ILMN_209788	STK31	NM_029916.1	NM_029916.1		77485	31044415	NM_029916.1	Stk31	NP_084192.1	ILMN_2599231	005050148	S	970	TAAAACAGAGAAAGAGGTTCTTCTAGAAAATTACAAAGCATTAGAATTAA	6	+	49369250-49369299	6qB2.3	Mus musculus serine threonine kinase 31 (Stk31), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	C330007K24Rik	C330007K24Rik
Mus musculus	RefSeq	ILMN_209788	ILMN_209788	STK31	NM_029916.1	NM_029916.1		77485	31044415	NM_029916.1	Stk31	NP_084192.1	ILMN_1250210	006860176	S	2878	GTCCCTCCTTTGTAGCTTGATATATTTTAGAAGTTCAATGACTGCTGAGC	6	+	49419141-49419190	6qB2.3	Mus musculus serine threonine kinase 31 (Stk31), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	C330007K24Rik	C330007K24Rik
Mus musculus	RefSeq	ILMN_250242	ILMN_250242	CHURC1	NM_206534.1	NM_206534.1		211151	124249114	NM_206534.1	Churc1	NP_996257.1	ILMN_2797689	005420142	S	65	GGGGCACCACCTGTCTGGAGAATGGATCGTTCTTACTGAACTTCGCAGGC	12	+	77866624-77866625:77874245-77874292	12qC3	Mus musculus churchill domain containing 1 (Churc1), mRNA. XM_989232	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]	chch; My015; 1700030P15Rik	chch; My015; 1700030P15Rik
Mus musculus	MEEBO	ILMN_218943	ILMN_218943	HOMEZ	scl00239099.1_61	NM_183174.1			34147212	NM_183174.1	Homez		ILMN_2702242	004220196	S	2558	CATAACAGTGAGTCAGAGGAGAAGGGCGGTGGGGTAGTTACAGGTTTGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_218943	ILMN_218943	HOMEZ	scl00239099.1_61	NM_183174.1			34147212	NM_183174.1	Homez		ILMN_2702243	003940414	S	2563	CAGTGAGTCAGAGGAGAAGGGCGGTGGGGTAGTTACAGGTTTGGATTTAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_203324	ILMN_238387	SEH1L	NM_001039088.1	NM_001039088.1		72124	84875514	NM_001039088.1	Seh1l	NP_001034177.1	ILMN_1223674	006420328	S	1320	TCCAAGATGCACCAGCAGCCCGTTCACTACTACACACAGTCCAAAAGGCC	18	+	67952919-67952968	18qE1	Mus musculus SEH1-like (S. cerevisiae (Seh1l), transcript variant 1, mRNA.				Seh1; SEH1A; SEH1B; 2610007A16Rik; SEC13L; AW540070	Seh1; SEH1A; SEH1B; 2610007A16Rik; SEC13L; AW540070
Mus musculus	RefSeq	ILMN_238387	ILMN_238387	SEH1L	NM_001039088.1	NM_001039088.1		72124	84875514	NM_001039088.1	Seh1l	NP_001034177.1	ILMN_3024099	004260243	I	2857	CTAGAGCACTCTTGCGATGCCAACCTCCAGTATCCTCACCCTCGCAGAGG	18	+	67954456-67954505	18qE1	Mus musculus SEH1-like (S. cerevisiae (Seh1l), transcript variant 1, mRNA.				Seh1; SEH1A; SEH1B; 2610007A16Rik; SEC13L; AW540070	Seh1; SEH1A; SEH1B; 2610007A16Rik; SEC13L; AW540070
Mus musculus	RefSeq	ILMN_238387	ILMN_238387	SEH1L	NM_001039088.1	NM_001039088.1		72124	84875514	NM_001039088.1	Seh1l	NP_001034177.1	ILMN_3096750	002340646	A	975	GTCTGGAGGGTGAGTTGGAACATAACAGGGACAGTCCTGGCGTCTTCAGG	18	+	67949073-67949122	18qE1	Mus musculus SEH1-like (S. cerevisiae (Seh1l), transcript variant 1, mRNA.				Seh1; SEH1A; SEH1B; 2610007A16Rik; SEC13L; AW540070	Seh1; SEH1A; SEH1B; 2610007A16Rik; SEC13L; AW540070
Mus musculus	RefSeq	ILMN_213380	ILMN_213380	HTATSF1	NM_028242.1	NM_028242.1		72459	23956211	NM_028242.1	Htatsf1	NP_082518.1	ILMN_2636490	003120601	S	2591	GCCATCTGACTAATGTCTCGAAGGGTTTTGTTCTCACCTGTACCAGTGGA	X	+	54320141-54320190	XqA5	Mus musculus HIV TAT specific factor 1 (Htatsf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2600017A12Rik; 1600023H17Rik; TAT-SF1; 2700077B20Rik	2600017A12Rik; 1600023H17Rik; TAT-SF1; 2700077B20Rik
Mus musculus	RefSeq	ILMN_223022	ILMN_223022	1200009F10RIK	NM_026166.2	NM_026166.2		67454	121583480	NM_026166.2	1200009F10Rik	NP_080442.2	ILMN_1255564	006040619	S	3171	GCTTTATGGCAAATTCCCAGTATTATAATCCACACTTTCGTATCTCTGTA	10	+	90561323-90561372	10qC2	Mus musculus RIKEN cDNA 1200009F10 gene (1200009F10Rik), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence ISS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	D18354; Ikip; 1700023M03Rik	D18354; Ikip; 1700023M03Rik
Mus musculus	RefSeq	ILMN_256100	ILMN_256100	LDLRAD2	NM_001033979.1	NM_001033979.1		435811	85702178	NM_001033979.1	Ldlrad2	NP_001029151.1	ILMN_2922672	006280278	S	1525	GTCACTACGACTGGAAGGAGAGGATCTGAGATTGCCAAGGGTCATGTCTG	4	-	137127044-137127093	4qD3	Mus musculus low density lipoprotein receptor A domain containing 2 (Ldlrad2), mRNA.					
Mus musculus	Riken	ILMN_206534	ILMN_206534	D930042N17RIK	ri|D930042N17|PX00203I13|AK086629|3486					AK086629	D930042N17Rik		ILMN_2580818	006420500	S	3172	TATGACAGTAAAAAACACATTCTCTCAGTCTTACCTGCAGGCCACTCTCC										
Mus musculus	MEEBO	ILMN_184914	ILMN_184914	SCL0001837.1_178	scl0001837.1_178	AK089415.1			26354487	AK089415.1	scl0001837.1_178		ILMN_2422642	007050181	S	4	GAGAGTGTTTGGATTGTAGGCTCTCAAATTGCTTTATGTGCAGTTAATGT										
Mus musculus	RefSeq	ILMN_220589	ILMN_220589	4930474N05RIK	NM_175008.3	NM_175008.3		218921	149363667	NM_175008.3	4930474N05Rik	NP_778173.1	ILMN_1219913	002450446	S	534	GCACATGCCACACTCTGAGCTTTTTATCCGTGTCGATAGGCTTCTGAACG				14qB	Mus musculus RIKEN cDNA 4930474N05 gene (4930474N05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198030	ILMN_245597	CCDC62	XM_915492.2	XM_915492.2		208908	94375430	XM_915492.2	Ccdc62	XP_920585.2	ILMN_1251075	002570040	S	478	AGGAGATGGCTCAGAAGGCCACACACTCCACCCTCCTCTCGGAAGACCTT				5qF	PREDICTED: Mus musculus coiled-coil domain containing 62 (Ccdc62), mRNA.					
Mus musculus	RefSeq	ILMN_198031	ILMN_245597	CCDC62	XM_915492.2	XM_915492.2		208908	94375430	XM_915492.2	Ccdc62	XP_920585.2	ILMN_1231259	006220707	S	1836	GAGCTCATTGGCATGCAGCCTTCCCAGTGTGTGGGTTCCTTAAAGTCTGC				5qF	PREDICTED: Mus musculus coiled-coil domain containing 62 (Ccdc62), mRNA.					
Mus musculus	Riken	ILMN_202066	ILMN_202066	2610524A10RIK	ri|2610524A10|ZX00062F04|AK012132|1327					AK012132	2610524A10Rik		ILMN_1229412	004830681	S	148	GTGACCCCCAGACTGCCACAGGCCTCCCAGGAAAACTATGTCTGGAATCC										
Mus musculus	RefSeq	ILMN_226483	ILMN_226483	BGLAP2	NM_001032298.2	NM_001032298.2		12097	83816951	NM_001032298.2	Bglap2	NP_001027469.2	ILMN_2944508	004670497	S	249	AGTGTGAGCTTAACCCTGCTTGTGACGAGCTATCAGACCAGTATGGCTTG	3	-	88181830-88181879	3qF1	Mus musculus bone gamma-carboxyglutamate protein 2 (Bglap2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	OG2; mOC-B	OG2; mOC-B
Mus musculus	RefSeq	ILMN_212353	ILMN_212353	OLFR975	NM_146828.1	NM_146828.1		258825	22129204	NM_146828.1	Olfr975	NP_667039.1	ILMN_2625468	002100452	S	657	CGTCATCTCCATATTGAAGATCCGTTCTTCTGAAGGCAGGCGCAGAGCCT	9	-	39757648-39757697	9qA5.1	Mus musculus olfactory receptor 975 (Olfr975), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR224-2	MOR224-2
Mus musculus	Riken	ILMN_204262	ILMN_204262	A830082G19RIK	ri|A830082G19|PX00156O14|AK044033|778					AK044033	A830082G19Rik		ILMN_1253250	006350154	S	296	GCCTTTTCTTCTGAGTGCTGGGGTTAAAGGTGTAAACTGCTCGCCTAGCT										
Mus musculus	RefSeq	ILMN_200265	ILMN_200265	LOC386099	XM_359069.1	XM_359069.1			38081147	XM_359069.1	LOC386099		ILMN_2538159	001980600	S	154	GGCCAGGAAGTTGGCTGGTTGTCTGGAGCCGAAGATGGCGAAGCCTCAAA										
Mus musculus	RefSeq	ILMN_216396	ILMN_216396	SPO11	NM_012046.1	NM_012046.1		26972	6755623	NM_012046.1	Spo11	NP_036176.1	ILMN_2923048	006660114	S	1213	CAAGCTGAGGTTTGGAGGATGGATCTAAAGTCACAGCGGGGAACGTGGAC	2	+	172818577-172818604:172818605-172818626	2qH3	Mus musculus sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae) (Spo11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AI449549	AI449549
Mus musculus	RefSeq	ILMN_218093	ILMN_218093	DUSP7	NM_153459.2	NM_153459.2		235584	83816910	NM_153459.2	Dusp7	NP_703189.2	ILMN_2804523	004540056	S	2829	CCACATCTTACCTCACAGGGCTGGTTTTCAGGGATTCTTTAGGGAAGCAG	9	+	106233441-106233490	9qF1	Mus musculus dual specificity phosphatase 7 (Dusp7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	MKPX; MKP-X; AU015694; PYST2	MKPX; MKP-X; AU015694; PYST2
Mus musculus	RefSeq	ILMN_214581	ILMN_214581	ADAM9	NM_007404.1	NM_007404.1		11502	6680643	NM_007404.1	Adam9	NP_031430.1	ILMN_2649502	006060561	S	3592	GGAAGCAGTGGTTTCCTTAGATAACTACAGAATTATACTGGTCTCTGGGA	8	-	26060298-26060347	8qA2	Mus musculus a disintegrin and metallopeptidase domain 9 (meltrin gamma) (Adam9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	MDC9; Mltng; AU020942; mKIAA0021	MDC9; Mltng; AU020942; mKIAA0021
Mus musculus	Riken	ILMN_206884	ILMN_206884	MSN	ri|E030019E14|PX00205A22|AK087001|1572					AK087001	Msn		ILMN_2583410	007000477	S	922	GAGACACCTGGCACACTCCCCTCTTCAGATCCTCAAACCGGAGGACTCAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215004	ILMN_215004	NT5C3L	NM_026561.3	NM_026561.3		68106	142368950	NM_026561.3	Nt5c3l	NP_080837.2	ILMN_1245842	006110292	S	622	CACCTACAACAAGAACAGCTCCGTGTGTGAGAACTCCAGCTACTTCCAGC	11	-	100292506-100292555	11qD	Mus musculus 5'-nucleotidase, cytosolic III-like (Nt5c3l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]	2610037D24Rik; AI841843; C330027I04Rik	2610037D24Rik; AI841843; C330027I04Rik
Mus musculus	RefSeq	ILMN_215004	ILMN_215004	NT5C3L	NM_026561.3	NM_026561.3		68106	142368950	NM_026561.3	Nt5c3l	NP_080837.2	ILMN_2708357	006580717	S	347	CACAGTCTCCTGTGCCAGCAGAGGATCCAGAAAGTCCAGATCGCTCAGGT	11	-	100296035-100296084	11qD	Mus musculus 5'-nucleotidase, cytosolic III-like (Nt5c3l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]	2610037D24Rik; AI841843; C330027I04Rik	2610037D24Rik; AI841843; C330027I04Rik
Mus musculus	RefSeq	ILMN_241143	ILMN_241143	CLRN1	NM_153385.2	NM_153385.2		229320	68533238	NM_153385.2	Clrn1	NP_700434.1	ILMN_3136064	000430634	A	1567	CCCTTCCAGAGGGGGACGTATTCCATGACCTTCCCAAAGTTCTTGAGCTG	3	-	58649362-58649411	3qD	Mus musculus clarin 1 (Clrn1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]		A130002D11Rik; Ush3a; USH3	A130002D11Rik; Ush3a; USH3
Mus musculus	RefSeq	ILMN_195063	ILMN_225530	DDC	NM_016672.3	NM_016672.3		13195	142348104	NM_016672.3	Ddc	NP_057881.1	ILMN_1260450	002340300	S	1610	GATTACATGTGGCGTCATGTGTGTCTCCAACATTAACCAGAAACCTCTGA	11	-	11714393-11714442	11qA1	Mus musculus dopa decarboxylase (Ddc), mRNA.		The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 42423] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids, as carried out by individual cells [goid 6519] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-tryptophan = tryptamine + CO2 [goid 4058] [evidence IEA]	Aadc	Aadc
Mus musculus	RefSeq	ILMN_217981	ILMN_317137	LOC100048554	XM_001480890.1	XM_001480890.1		100048554	149262244	XM_001480890.1	LOC100048554	XP_001480940.1	ILMN_1238886	002480296	S	270	GTGTAGACCCCACACAGAAGTGGGTCAGTGAGTACATGGAGATCCTTGAC					PREDICTED: Mus musculus similar to monocyte chemoattractant protein-2 (MCP-2) (LOC100048554), mRNA.					
Mus musculus	RefSeq	ILMN_184903	ILMN_225412	YIPF4	NM_026417.3	NM_026417.3		67864	141803036	NM_026417.3	Yipf4	NP_080693.2	ILMN_1255657	005960647	S	2040	GCCCCCAAAAGGTTAACTTCTGTTCCTGATATGGTATGACATCGTCTCTG	17	+	74899545-74899594	17qE2	Mus musculus Yip1 domain family, member 4 (Yipf4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2310034L04Rik	2310034L04Rik
Mus musculus	MEEBO	ILMN_194027	ILMN_194027	MJ-8000-191_7593	MJ-8000-191_7593						MJ-8000-191_7593		ILMN_2502689	000840661	S	15	CTGAATGGGTCCAATACACACCGGAGCAAGTAGAGCAGTTAGTAGTAGAG										
Mus musculus	MEEBO	ILMN_223786	ILMN_223786	OLFR1406	scl0258758.1_45				22129324	NM_146763	Olfr1406		ILMN_2769151	002070446	S	589	TTGACGTTAGCTCTTAGCCTTATGGTCATCACAGCCCCTGCCACTTTCCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_186930	ILMN_314782	LOC100039590	XM_001473149.1	XM_001473149.1		100039590	149258336	XM_001473149.1	LOC100039590	XP_001473199.1	ILMN_1228372	001190433	S	1009	CTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCCCTGTTCAAAATA	8	+	4251357-4251406	8qA1.1	PREDICTED: Mus musculus similar to transforming growth factor, beta receptor III (betaglycan, 300kDa) (LOC100039590), mRNA.					
Mus musculus	RefSeq	ILMN_213565	ILMN_213565	CDKN1B	NM_009875.3	NM_009875.3		12576	144227221	NM_009875.3	Cdkn1b	NP_034005.2	ILMN_2638428	002810243	S	921	ACAATCCGGCTGGGTTAGCGGAGCAGTGTCCAGGGATGAGGAAGCGACCT	6	+	134871355-134871404	6qG1	Mus musculus cyclin-dependent kinase inhibitor 1B (Cdkn1b), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of microtubule polymerization [goid 31116] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IGI]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IDA]	AI843786; p27; AA408329; Kip1; p27Kip1	AI843786; p27; AA408329; Kip1; p27Kip1
Mus musculus	RefSeq	ILMN_213565	ILMN_213565	CDKN1B	NM_009875.3	NM_009875.3		12576	144227221	NM_009875.3	Cdkn1b	NP_034005.2	ILMN_1228598	005820463	S	2755	GATTACGAAAATATGCTACTCTGATGTGTTATGGTTCCTGAATTTCTTTT	6	+	134873750-134873799	6qG1	Mus musculus cyclin-dependent kinase inhibitor 1B (Cdkn1b), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of microtubule polymerization [goid 31116] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IGI]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IDA]	AI843786; p27; AA408329; Kip1; p27Kip1	AI843786; p27; AA408329; Kip1; p27Kip1
Mus musculus	Riken	ILMN_203680	ILMN_203680	9530058K19RIK	ri|9530058K19|PX00113E02|AK035512|2776					AK035512	9530058K19Rik		ILMN_2559157	005700082	S	2631	CAAGTGCTCCTGGCTCACATTTTAGCATGAGTCTTTACATTGCAACTTGG										
Mus musculus	RefSeq	ILMN_222583	ILMN_222583	OLFR1196	NM_146464.2	NM_146464.2		258456	121582638	NM_146464.2	Olfr1196	NP_666675.2	ILMN_1223930	005820131	S	565	GACGTTCATGTTGTAAGTATCTTAGCAATTGCCAACTCTGGGATGGTGCT	2	-	88540870-88540919	2qE1	Mus musculus olfactory receptor 1196 (Olfr1196), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR225-5	MOR225-5
Mus musculus	RefSeq	ILMN_217687	ILMN_217687	TMEM159	NM_145586.1	NM_145586.1		233806	21704177	NM_145586.1	Tmem159	NP_663561.1	ILMN_2686407	004230661	S	620	GCCAACGTCGACTGTCAGCTGGCTATGAAGTTCACGGAGTCTGAGAGGCT	7	+	127263709-127263758	7qF2	Mus musculus transmembrane protein 159 (Tmem159), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			8430420C20Rik	8430420C20Rik
Mus musculus	RefSeq	ILMN_217687	ILMN_217687	TMEM159	NM_145586.1	NM_145586.1		233806	21704177	NM_145586.1	Tmem159	NP_663561.1	ILMN_1256463	003060056	S	619	TGCCAACGTCGACTGTCAGCTGGCTATGAAGTTCACGGAGTCTGAGAGGC	7	+	127263708-127263757	7qF2	Mus musculus transmembrane protein 159 (Tmem159), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			8430420C20Rik	8430420C20Rik
Mus musculus	RefSeq	ILMN_210565	ILMN_210565	5830427D03RIK	NM_175232.3	NM_175232.3		76061	142361597	NM_175232.3	5830427D03Rik	NP_780441.1	ILMN_1227266	001010280	S	1658	GTCATTCCATAACCGCGTGTGACAAGTAAGACAGCATGTGATCCTAGTAC	15	-	98590776-98590825	15qF1	Mus musculus RIKEN cDNA 5830427D03 gene (5830427D03Rik), mRNA.					
Mus musculus	Riken	ILMN_204370	ILMN_204370	9330188B09RIK	ri|9330188B09|PX00107C13|AK034413|3451					AK034413	9330188B09Rik		ILMN_1222736	001580189	S	2878	CTGGGCAGTCAACGGCCGCTCAGCATACTTCGCAGATGGAGCCTTTTAAC										
Mus musculus	RefSeq	ILMN_209786	ILMN_209786	TFG	NM_019678.2	NM_019678.2		21787	118130552	NM_019678.2	Tfg	NP_062652.1	ILMN_2976601	000730167	S	1350	TGCTCGTAACCGTCCTCCTTTTGGTCAGGGGTATGCCCAACCTGGACCTG	16	-	56701212-56701261	16qC1.1	Mus musculus Trk-fused gene (Tfg), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	AI173908	AI173908
Mus musculus	RefSeq	ILMN_216997	ILMN_238314	VASN	NM_139307.2	NM_139307.2		246154	31981692	NM_139307.2	Vasn	NP_647468.2	ILMN_2677921	007570600	S	2512	GGGGAAGGTACTAGGGCACTGGCCTTGGCCTCAAAAGTGCAGGCACACTT	16	+	4650538-4650587	16qA1	Mus musculus vasorin (Vasn), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2610528G05Rik; Slitl2	2610528G05Rik; Slitl2
Mus musculus	RefSeq	ILMN_211341	ILMN_211341	FARSB	NM_011811.2	NM_011811.2		23874	31981399	NM_011811.2	Farsb	NP_035941.2	ILMN_2860196	002190736	S	1691	GGCGTCCTTCATCCTGATGTTATCACCAAATTTGAGCTGACCATGCCCTG	1	-	78308374-78308423	1qC4	Mus musculus phenylalanyl-tRNA synthetase, beta subunit (Farsb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling phenylalanine to phenylalanyl-tRNA, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6432] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe) [goid 4826] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Farslb; Farsl; Frsb; Farsa; C76708	Farslb; Farsl; Frsb; Farsa; C76708
Mus musculus	RefSeq	ILMN_212349	ILMN_212349	TRAK2	NM_172406.2	NM_172406.2		70827	40254202	NM_172406.2	Trak2	NP_765994.2	ILMN_2625428	001030687	S	954	AGAATGACTGAAGAGCTGTCGGGAAAGAGCGACGAGCTGCTCCGGTACCA	1	-	58976122-58976171	1qC1.3	Mus musculus trafficking protein, kinesin binding 2 (Trak2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with the gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor [goid 50811] [evidence ISO]	OIP98; GRIF-1; Als2cr3; mKIAA0549; AW046271; AI480836; GRIF1; CALS-C; 4733401O11Rik	OIP98; GRIF-1; Als2cr3; mKIAA0549; AW046271; AI480836; GRIF1; CALS-C; 4733401O11Rik
Mus musculus	RefSeq	ILMN_212349	ILMN_212349	TRAK2	NM_172406.2	NM_172406.2		70827	40254202	NM_172406.2	Trak2	NP_765994.2	ILMN_2872698	006510431	S	5785	CAAGTGTGGCCCTAGGCATGGGATCCCGGGGGCTCCAGGAAAATGCTATT	1	-	58957416-58957465	1qC1.3	Mus musculus trafficking protein, kinesin binding 2 (Trak2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with the gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor [goid 50811] [evidence ISO]	OIP98; GRIF-1; Als2cr3; mKIAA0549; AW046271; AI480836; GRIF1; CALS-C; 4733401O11Rik	OIP98; GRIF-1; Als2cr3; mKIAA0549; AW046271; AI480836; GRIF1; CALS-C; 4733401O11Rik
Mus musculus	RefSeq	ILMN_212349	ILMN_212349	TRAK2	NM_172406.2	NM_172406.2		70827	40254202	NM_172406.2	Trak2	NP_765994.2	ILMN_2641431	000730092	S	5596	GAGCCTACCATCTGTTGAAGGCACATTTTACACAGTATTCCAAGCCCCTA	1	-	58957605-58957654	1qC1.3	Mus musculus trafficking protein, kinesin binding 2 (Trak2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with the gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor [goid 50811] [evidence ISO]	OIP98; GRIF-1; Als2cr3; mKIAA0549; AW046271; AI480836; GRIF1; CALS-C; 4733401O11Rik	OIP98; GRIF-1; Als2cr3; mKIAA0549; AW046271; AI480836; GRIF1; CALS-C; 4733401O11Rik
Mus musculus	RefSeq	ILMN_216001	ILMN_216001	HDGF	NM_008231.2	NM_008231.2		15191	31560690	NM_008231.2	Hdgf	NP_032257.2	ILMN_3003290	001780608	S	2080	CTCCCATCTCTCCTCTGGGCTCTGAAGAAAAATTGCTGACTGTAGCTTTG	3	+	88001939-88001988	3qF1	Mus musculus hepatoma-derived growth factor (Hdgf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	AI118077; D3Ertd299e	AI118077; D3Ertd299e
Mus musculus	RefSeq	ILMN_216001	ILMN_216001	HDGF	NM_008231.2	NM_008231.2		15191	31560690	NM_008231.2	Hdgf	NP_032257.2	ILMN_2744439	004570725	S	1010	CTGCTGCTGTCTGGGTGCTACTGGGGAAACTGGCCATGGCCTGCAAACTG	3	+	88000869-88000918	3qF1	Mus musculus hepatoma-derived growth factor (Hdgf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	AI118077; D3Ertd299e	AI118077; D3Ertd299e
Mus musculus	RefSeq	ILMN_201511	ILMN_201511	SERPINA1B	NM_009244.2	NM_009244.2			40254614	NM_009244.2	Serpina1b		ILMN_1252899	002650463	S	1350	GCAGCCACAGTCTTTGAAGCCGTTCCTATGTCTATGCCCCCTATCCTGCG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IMP]; Stops, prevents or reduces the activity of the serine endopeptidase chymotrypsin [goid 30569] [evidence IMP]		
Mus musculus	MEEBO	ILMN_224256	ILMN_224256	FZD3	scl45417.7.1_19				10946845	NM_021458	Fzd3		ILMN_2777437	003400681	S	2449	CATCAACCCTGGGGTGTGAACACATCCCAAACCCTAAGGATCATGTCATC						The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates [goid 1736] [evidence IGI]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210484	ILMN_210484	PGC	NM_025973.3	NM_025973.3		109820	142375746	NM_025973.3	Pgc	NP_080249.2	ILMN_2606088	003290402	S	1314	CCCCGCCTCTCTGTATCCAGCTTTCCTTTTCTGGAAACCTAGACATTCCC	17	+	47871357-47871406	17qC	Mus musculus progastricsin (pepsinogen C) (Pgc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	2210410L06Rik; MGC117575; Upg-1; Upg1	2210410L06Rik; MGC117575; Upg-1; Upg1
Mus musculus	Riken	ILMN_205733	ILMN_205733	MAP3K14	ri|A230066D12|PX00128H12|AK038828|2964					AK038828	Map3k14		ILMN_1241869	003170746	S	2634	AGTAGGTAGAACTCTGGGGAGCTGAAAGGGAAGCCACACAGGGGCTGCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISO]		
Mus musculus	RefSeq	ILMN_210884	ILMN_210884	BGLAP1	NM_007541.2	NM_007541.2		12096	83816949	NM_007541.2	Bglap1	NP_031567.1	ILMN_3028702	003870392	I	427	CAAGTATGGATGTCACAGCAGCTCCAAAATAAAGTTCAGATGAGGAAGTG	3	-	88187417-88187466	3qF1	Mus musculus bone gamma carboxyglutamate protein 1 (Bglap1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	OC; mOC-A; Bglap; OG1	OC; mOC-A; Bglap; OG1
Mus musculus	RefSeq	ILMN_210884	ILMN_210884	BGLAP1	NM_007541.2	NM_007541.2		12096	83816949	NM_007541.2	Bglap1	NP_031567.1	ILMN_3101908	000430546	A	31	CCCAGACCTAGCAGACACCATGAGGACCATCTTTCTGCTCACTCTGCTGA	3	-	88188306-88188337:88188338-88188355	3qF1	Mus musculus bone gamma carboxyglutamate protein 1 (Bglap1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	OC; mOC-A; Bglap; OG1	OC; mOC-A; Bglap; OG1
Mus musculus	RefSeq	ILMN_210202	ILMN_210202	TBC1D5	NM_028162.2	NM_028162.2		72238	36287143	NM_028162.2	Tbc1d5	NP_082438.2	ILMN_1217144	006280414	S	5530	GATGTAGGAAATGCCTCCTTGGCAGAGCGAGCCCACTTGATGTGTACTAA	17	-	50872471-50872520	17qC	Mus musculus TBC1 domain family, member 5 (Tbc1d5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	1600014N05Rik; KIAA0210; mKIAA0210	1600014N05Rik; KIAA0210; mKIAA0210
Mus musculus	RefSeq	ILMN_210202	ILMN_210202	TBC1D5	NM_028162.2	NM_028162.2		72238	36287143	NM_028162.2	Tbc1d5	NP_082438.2	ILMN_2612443	006550369	S	248	TGACTTGGTGAAGATAGGAAAACCGTCAGAAAGGCTGAAGTACTGCCATA	17	-	51282685-51282734	17qC	Mus musculus TBC1 domain family, member 5 (Tbc1d5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	1600014N05Rik; KIAA0210; mKIAA0210	1600014N05Rik; KIAA0210; mKIAA0210
Mus musculus	RefSeq	ILMN_196397	ILMN_196397	2210414H16RIK	XM_135631.1	XM_135631.1			20944778	XM_135631.1	2210414H16Rik		ILMN_2523958	003140538	S	816	TGTCAAACTTGGTAAAGAAGCTCCCAGAAACAGCTGAGGGGTCACCCACT										
Mus musculus	Riken	ILMN_206899	ILMN_206899	7530424I01RIK	ri|7530424I01|PX00312K01|AK078725|933					AK078725	7530424I01Rik		ILMN_2583530	006620202	S	711	AGTTCAAGTTGGTCTGGAACTTGTGCTGTCACCGCCTCAGTCCTGAGTGC										
Mus musculus	MEEBO	ILMN_195844	ILMN_195844	SCL0001359.1_149	scl0001359.1_149	BC052058.1			30354387	BC052058.1	scl0001359.1_149		ILMN_2519264	006980500	S	17	AGGGATTTTTTTCACATGTATATGATTAGGCTAGATCCTAAAATACATAG										
Mus musculus	RefSeq	ILMN_218839	ILMN_218839	MTSS1	NM_144800.1	NM_144800.1		211401	21450158	NM_144800.1	Mtss1	NP_659049.1	ILMN_1255439	006900133	S	2744	GGTTCTCCTGGTTCCCAGGAGATGCTGCCAGCGCGAACGAACTCTTTAAT	15	-	58774933-58774982	15qD1	Mus musculus metastasis suppressor 1 (Mtss1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IDA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	mKIAA0429; 2310003N14Rik; D130001D01Rik; MGC37896; Mim; BC024131	mKIAA0429; 2310003N14Rik; D130001D01Rik; MGC37896; Mim; BC024131
Mus musculus	RefSeq	ILMN_188946	ILMN_188946	UNG	NM_011677.2	NM_011677.2		22256	101943420	NM_011677.2	Ung	NP_035807.2	ILMN_2457054	000270497	S	1453	TGAATGAGCTTCCTGATCACAAAGGGGGCGGGGTTCTCCCTGGGTTCACA	5	+	114588877-114588926	5qF	Mus musculus uracil DNA glycosylase (Ung), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: uridine + H2O = D-ribose + uracil [goid 45437] [evidence IEA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence IDA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence IMP]	UNG1; UNG2	UNG1; UNG2
Mus musculus	RefSeq	ILMN_188946	ILMN_188946	UNG	NM_011677.2	NM_011677.2		22256	101943420	NM_011677.2	Ung	NP_035807.2	ILMN_3056503	002030201	I	7	TGTTTTGCCGCGAAAAGCCTGCGTGGGAGCGCAGACGGGTGCAGCGGGTC	5	+	114581171-114581220	5qF	Mus musculus uracil DNA glycosylase (Ung), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: uridine + H2O = D-ribose + uracil [goid 45437] [evidence IEA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence IDA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence IMP]	UNG1; UNG2	UNG1; UNG2
Mus musculus	RefSeq	ILMN_188946	ILMN_188946	UNG	NM_011677.2	NM_011677.2		22256	101943420	NM_011677.2	Ung	NP_035807.2	ILMN_1232186	004570356	S	745	GAATCAGAACCTGAGTGGCCTCGTCTTCCTCCTCTGGGGCTCTTATGCTC	5	+	114587265-114587314	5qF	Mus musculus uracil DNA glycosylase (Ung), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: uridine + H2O = D-ribose + uracil [goid 45437] [evidence IEA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence IDA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence IMP]	UNG1; UNG2	UNG1; UNG2
Mus musculus	RefSeq	ILMN_188946	ILMN_188946	UNG	NM_011677.2	NM_011677.2		22256	101943420	NM_011677.2	Ung	NP_035807.2	ILMN_3133352	003130750	A	1662	GGTGTGTGTGGTGCTGGGGATCTAACTCCAAGGTGCTGTTTCTTAGGGGC	5	+	114589086-114589135	5qF	Mus musculus uracil DNA glycosylase (Ung), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: uridine + H2O = D-ribose + uracil [goid 45437] [evidence IEA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence IDA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence IMP]	UNG1; UNG2	UNG1; UNG2
Mus musculus	RefSeq	ILMN_209091	ILMN_209091	SPATA5	NM_021343.1	NM_021343.1		57815	10946659	NM_021343.1	Spata5	NP_067318.1	ILMN_2592435	001740687	S	2671	GAGACGCTTTTATGAAGATTACCAAGAAAAGAGTGGACTACACACAGTCT	3	+	37330634-37330683	3qB	Mus musculus spermatogenesis associated 5 (Spata5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Spaf; 2510048F20Rik; C78064	Spaf; 2510048F20Rik; C78064
Mus musculus	MEEBO	ILMN_186323	ILMN_186323	DHODH	scl34346.10_267				31981082	NM_020046	Dhodh		ILMN_1225904	002970228	S	2	CTGCAACTGGCGTATTTTAGGTTTCCTGTCTAGGTCCACCTGAAAGGGCG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate [goid 6222] [evidence IEA]; The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (S)-dihydroorotate + O2 = orotate + H2O2 [goid 4158] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-dihydroorotate + acceptor = orotate + reduced acceptor [goid 4152] [evidence IEA]		
Mus musculus	Riken	ILMN_203968	ILMN_203968	PLG	ri|A530029M06|PX00140F14|AK040840|1511					AK040840	Plg		ILMN_2561360	004390603	S	954	GCATGCCTTCTTCTAACGGGCCCATCGGCTTCTCAAAGAGCCTCAAAGGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence TAS]; The regrowth of lost or destroyed tissues [goid 42246] [evidence IMP]; An ongoing process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, resulting in the removal of small blood clots [goid 42730] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling [goid 48771] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192538	ILMN_242450	TTC8	NM_029553.2	NM_029553.2		76260	142359899	NM_029553.2	Ttc8	NP_083829.1	ILMN_1255530	003890136	S	1568	AGCAGCTGAAGCAGCACTTTGCTATGCTCTGATCAGTGCTTGGGCCACAT	12	+	100220753-100220784:100220785-100220802	12qE	Mus musculus tetratricopeptide repeat domain 8 (Ttc8), transcript variant 1, mRNA.	A 9+0 cilium that forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments [goid 32391] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BBS8; AV001447; 0610012F22Rik	BBS8; AV001447; 0610012F22Rik
Mus musculus	RefSeq	ILMN_223724	ILMN_223724	SAA1	NM_009117.3	NM_009117.3		20208	118130531	NM_009117.3	Saa1	NP_033143.1	ILMN_2826869	000520070	S	417	GCTCAGTAGGTTGTGCTGGGGGCCTGAGGGTGGGGTCTGGGCTTCTTCCT	7	-	53996009-53996058	7qB4	Mus musculus serum amyloid A 1 (Saa1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	Saa-1; Saa2	Saa-1; Saa2
Mus musculus	Riken	ILMN_205013	ILMN_205013	A130017M23RIK	ri|A130017M23|PX00121M14|AK037425|2601					AK037425	A130017M23Rik		ILMN_1233268	004060243	S	2527	GGGACCCTGCGCCTTCTGACCCCGCTGGCACTGCATTTACATAGTGAACA										
Mus musculus	RefSeq	ILMN_217559	ILMN_217559	LMBRD2	NM_177178.3	NM_177178.3		320506	31581567	NM_177178.3	Lmbrd2	NP_796152.2	ILMN_2684770	006250097	S	2958	TTTGTAGTAACTGGATCTTTTTATGGTTTTGACATTATTGCTTTGTAAAA	15	+	9127118-9127167	15qA1	Mus musculus LMBR1 domain containing 2 (Lmbrd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9930036E21Rik	9930036E21Rik
Mus musculus	RefSeq	ILMN_211370	ILMN_211370	GALE	NM_178389.3	NM_178389.3		74246	118130587	NM_178389.3	Gale	NP_848476.1	ILMN_2683811	005270575	S	1073	AAGGTGATGTGGCGGCCTGTTATGCCAACCCCAGCCTGGCCCATGAGGAG	4	+	135523532-135523581	4qD3	Mus musculus galactose-4-epimerase, UDP (Gale), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule [goid 16857] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: UDP-glucose = UDP-galactose [goid 3978] [evidence IDA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]	AI323962; 2310002A12Rik	AI323962; 2310002A12Rik
Mus musculus	RefSeq	ILMN_211370	ILMN_211370	GALE	NM_178389.3	NM_178389.3		74246	118130587	NM_178389.3	Gale	NP_848476.1	ILMN_1237990	005220187	S	443	TCAAGGCTGTGGGCGAGTCAGTGCAGAAGCCTCTGGACTACTATAGAGTT	4	+	135521952-135522001	4qD3	Mus musculus galactose-4-epimerase, UDP (Gale), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule [goid 16857] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: UDP-glucose = UDP-galactose [goid 3978] [evidence IDA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]	AI323962; 2310002A12Rik	AI323962; 2310002A12Rik
Mus musculus	Riken	ILMN_205541	ILMN_205541	D330020A13RIK	ri|D330020A13|PX00192G09|AK052280|1070					AK052280	D330020A13Rik		ILMN_2573345	004120092	S	859	GTGACCTCTGTGACTTTGGCCTCAGGACCTTTCTCTACCTAGAAAGACCC										
Mus musculus	MEEBO	ILMN_208668	ILMN_208668	IMPDH2	scl023918.12_65				31981381	NM_011830	Impdh2		ILMN_2588398	004260639	S	1408	ACCTGATTGCTGGCATCCAGCATTCCTGTCAGGACATTGGTGCCAAGAGT							The expansion of a lymphocyte population by cell division [goid 46651] [evidence IMP]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IMP]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222912	ILMN_222912	CBR2	NM_007621.1	NM_007621.1		12409	6671687	NM_007621.1	Cbr2	NP_031647.1	ILMN_2756665	002490672	S	877	CGCAGCTCACAGTTCCACCCCCATGTTACTGTCGATCCCACAACCACTCC	11	-	120590867-120590916	11qE2	Mus musculus carbonyl reductase 2 (Cbr2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A metabolic process that results in the oxidation of reduced nicotinamide adenine dinucleotide, NADH, to the oxidized form, NAD [goid 6116] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: R-CHOH-R' + NADP+ = R-CO-R' + NADPH + H+ [goid 4090] [evidence TAS]	MLCR	MLCR
Mus musculus	RefSeq	ILMN_210610	ILMN_210610	IL20RA	NM_172786.2	NM_172786.2		237313	141802697	NM_172786.2	Il20ra	NP_766374.1	ILMN_2607359	006330037	S	297	TGGCTGAATGCCTCTAAATGCGGGAGTATCAACAGGACCTACTGTGACCT	10	+	19469030-19469079	10qA3	Mus musculus interleukin 20 receptor, alpha (Il20ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	E230031K19	E230031K19
Mus musculus	RefSeq	ILMN_210610	ILMN_210610	IL20RA	NM_172786.2	NM_172786.2		237313	141802697	NM_172786.2	Il20ra	NP_766374.1	ILMN_1246596	002340102	S	1886	GAGCCCTGAGCTTTGTTGTAGACAGAGTAAGATTTGCAGGTTGGGTGGGG	10	+	19479657-19479706	10qA3	Mus musculus interleukin 20 receptor, alpha (Il20ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	E230031K19	E230031K19
Mus musculus	RefSeq	ILMN_184386	ILMN_243735	ZFP651	XM_981733.1	XM_981733.1		270210	94386597	XM_981733.1	Zfp651	XP_986827.1	ILMN_2418210	001660619	S	6050	AAAAGTGACATGTTTCCACGCCATTAGTCCATTAGTACCATGGCCAAGCC	9	+	121620143-121620192		PREDICTED: Mus musculus zinc finger protein 651 (Zfp651), mRNA.					
Mus musculus	MEEBO	ILMN_223375	ILMN_223375	EVI2B	scl0216984.1_268	NM_146023.2			31542624	NM_146023.2	Evi2b		ILMN_2763226	006620019	S	3792	AGCCACCTCTTACTGATAACACTTTTTTTATCTACAGAAACACCTACTTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_198998	ILMN_198998	LOC212813	XM_137021.2	XM_137021.2			38090412	XM_137021.2	LOC212813		ILMN_1237250	002360669	S	2234	ACCCAGATAATCATGCTCTTGAGCCACTCTACAATGTCTGCATAGGCCTC										
Mus musculus	RefSeq	ILMN_208982	ILMN_208982	CCRN4L	NM_009834.1	NM_009834.1		12457	33563247	NM_009834.1	Ccrn4l	NP_033964.1	ILMN_1255422	004250689	S	2642	GTGATGACGTTGGTAGACGTGTGAAGATTACTCCAATCACTTCTCCTGGG	3	+	51055149-51055198	3qC	Mus musculus CCR4 carbon catabolite repression 4-like (S. cerevisiae) (Ccrn4l), mRNA.		Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]		Ccr4; nocturnin; AU043840	Ccr4; nocturnin; AU043840
Mus musculus	RefSeq	ILMN_208982	ILMN_208982	CCRN4L	NM_009834.1	NM_009834.1		12457	33563247	NM_009834.1	Ccrn4l	NP_033964.1	ILMN_2591440	003360553	S	2914	CCTGGAGTTCTCTTTCAATTGTTGAAGCCTCTTCCAAACAAAATATCCTT	3	+	51055421-51055470	3qC	Mus musculus CCR4 carbon catabolite repression 4-like (S. cerevisiae) (Ccrn4l), mRNA.		Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]		Ccr4; nocturnin; AU043840	Ccr4; nocturnin; AU043840
Mus musculus	MEEBO	ILMN_187097	ILMN_187097	9130223C08RIK	scl25432.1.1_21						9130223C08Rik		ILMN_2441142	003120746	S	8	CCTGGTATTTGTGACTGTCGTGACCAACGCAGTGCAGACTTTACACGTGG										
Mus musculus	MEEBO	ILMN_217443	ILMN_217443	LPHN1	scl00330814.1_43	XM_134383.4			38089362	XM_134383.4	Lphn1		ILMN_1228782	000270392	S	4869	GCAGGATCCACTCTATCTGCTGCTCACTCTTCTCCATCCACCAGAGGAAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224278	ILMN_224639	H2-DMA	NM_010386.3	NM_010386.3		14998	148539978	NM_010386.3	H2-DMa	NP_034516.3	ILMN_2777769	000150138	S	707	CCTTTGGCCTCGGTGTGCTAGGCACCATCATGGGCATTGTCTTCTTCCTC				17qB1	Mus musculus histocompatibility 2, class II, locus DMa (H2-DMa), mRNA.	A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IMP]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IDA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IDA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	H-2Ma; H2-Ma	H-2Ma; H2-Ma
Mus musculus	RefSeq	ILMN_216669	ILMN_216669	SLC6A12	NM_133661.3	NM_133661.3		14411	146149180	NM_133661.3	Slc6a12	NP_598422.2	ILMN_1256644	001070019	S	2501	CGTGTGAGCCTCCAGCATCACCCCTGCAGCAGCTAACAAGCCTGCATGGA				6qF1	Mus musculus solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 (Slc6a12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + Na+(out) = gamma-aminobutyric acid(in) + Na+(in) [goid 5332] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	Gabt2; GAT2	Gabt2; GAT2
Mus musculus	MEEBO	ILMN_220596	ILMN_220596	1700016K13RIK	scl25999.6.1_129	XM_132393.2			38082025	XM_132393.2	1700016K13Rik		ILMN_1252820	003140577	S	1294	AGAAGGACAAAGATCGTAAGAAGTAATCTTCTCTCACCGTCCTGTCTGAG										
Mus musculus	Riken	ILMN_206062	ILMN_206062	D230041D01RIK	ri|D230041D01|PX00190M18|AK052067|2679					AK052067	D230041D01Rik		ILMN_1252223	000730376	S	2626	AGTGTCTGAGGGGCCATGTCAAGTCAGCCCTGGTGGCTGGATCCCAGAAT										
Mus musculus	RefSeq	ILMN_218649	ILMN_239510	OLFR1389	NM_147066.1	NM_147066.1		259069	22128828	NM_147066.1	Olfr1389	NP_667277.1	ILMN_1232911	004560576	S	760	GGCATATATACATACCTCCAACCTATCCACAGATATTCAGAGAACGAGGG	11	+	49244739-49244788	11qB1.2	Mus musculus olfactory receptor 1389 (Olfr1389), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-1; RP23-27B20.2	MOR256-1; RP23-27B20.2
Mus musculus	RefSeq	ILMN_220189	ILMN_311068	LOC100044172	XM_001471720.1	XM_001471720.1		100044172	149265173	XM_001471720.1	LOC100044172	XP_001471770.1	ILMN_1218584	006580711	S	2120	CCGGGCCTAGAAATATTAGCCAGTGTTCTCCTTCCATGTGGCTTCCCATG					PREDICTED: Mus musculus hypothetical protein LOC100044172 (LOC100044172), mRNA.					
Mus musculus	MEEBO	ILMN_186174	ILMN_186174	ENAH	scl15819.1.469_5				6753753	NM_010135	Enah		ILMN_2636853	004610195	S	2526	GAGCAAGTCGAACACTGCATAAAGAAGCAAACTACGGAGGGGCAGGACTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence TAS]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IDA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [evidence IDA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin [goid 5522] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186174	ILMN_186174	ENAH	scl15819.1.469_5				6753753	NM_010135	Enah		ILMN_2636855	005340603	S	2527	AGCAAGTCGAACACTGCATAAAGAAGCAAACTACGGAGGGGCAGGACTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence TAS]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IDA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [evidence IDA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin [goid 5522] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]		
Mus musculus	Riken	ILMN_206523	ILMN_206523	COL11A1	ri|D930017D11|PX00201C02|AK086264|2112					AK086264	Col11a1		ILMN_1232987	004540707	S	1999	GAGTGCTGAAGTAGAAGGATGAAGGAGTTTGGAGGGATTTGCTCTGGCAG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IGI]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195118	ILMN_195118	V1RE13	NM_145848.2	NM_145848.2		252910	31543929	NM_145848.2	V1re13	NP_665847.1	ILMN_2512743	005090367	S	1746	TCAATAAAGAACATTAAGAGAGCCATTCCTTGTCTTTCTAAGATTAATAA	7	-	11333092-11333141	7qA1	Mus musculus vomeronasal 1 receptor, E13 (V1re13), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213370	ILMN_213370	MAPK15	NM_177922.2	NM_177922.2		332110	31342667	NM_177922.2	Mapk15	NP_808590.1	ILMN_2859377	005700630	S	1465	TTCACAGGCAGAGGCTCAGGCGGCCAATCAGGCTCTGATCCGCAGTGATC	15	+	75829018-75829067	15qD3	Mus musculus mitogen-activated protein kinase 15 (Mapk15), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	BC048082; MGC56903; MGC56865	BC048082; MGC56903; MGC56865
Mus musculus	RefSeq	ILMN_213370	ILMN_213370	MAPK15	NM_177922.2	NM_177922.2		332110	31342667	NM_177922.2	Mapk15	NP_808590.1	ILMN_2672582	000510538	S	1067	CACGAAGGAGACCAGCTCTCTGCACCAGAGTATCGCAAACGCCTGTACCA	15	+	75828313-75828362	15qD3	Mus musculus mitogen-activated protein kinase 15 (Mapk15), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	BC048082; MGC56903; MGC56865	BC048082; MGC56903; MGC56865
Mus musculus	RefSeq	ILMN_213370	ILMN_213370	MAPK15	NM_177922.2	NM_177922.2		332110	31342667	NM_177922.2	Mapk15	NP_808590.1	ILMN_1260161	000360753	S	1576	GGAGGCCCCGGAACCCCGACCCGGCCGAAGGATGTTTGGCATCTCGGTCT	15	+	75829229-75829278	15qD3	Mus musculus mitogen-activated protein kinase 15 (Mapk15), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	BC048082; MGC56903; MGC56865	BC048082; MGC56903; MGC56865
Mus musculus	RefSeq	ILMN_218235	ILMN_218235	1200013B08RIK	NM_028773.2	NM_028773.2		74131	27229178	NM_028773.2	1200013B08Rik	NP_083049.1	ILMN_2933887	004260400	S	2444	GGACTACCTGCTTAGTAAGTGGGCATGCTTCTGATCCACTACTACCAGGG	X	+	44406050-44406099	XqA4	Mus musculus RIKEN cDNA 1200013B08 gene (1200013B08Rik), mRNA.				SLY1; AW413946	SLY1; AW413946
Mus musculus	RefSeq	ILMN_259004	ILMN_259004	TRAPPC9	NM_180662.1	NM_180662.1		76510	68264925	NM_180662.1	Trappc9	NP_850993.1	ILMN_3011730	005810288	I	737	AAGCGCCTGGACAGAGCCACCGACAAATCCGGGGACAAGATCCCTCTTCT	15	-	72888402-72888451	15qD3	Mus musculus trafficking protein particle complex 9 (Trappc9), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		KIAA1882; 4632408O18Rik; mKIAA1882; Ibp; 2900005P22Rik; Nibp	KIAA1882; 4632408O18Rik; mKIAA1882; Ibp; 2900005P22Rik; Nibp
Mus musculus	RefSeq	ILMN_200259	ILMN_200259	LOC386085	XM_359063.1	XM_359063.1			38081131	XM_359063.1	LOC386085		ILMN_1258858	001660114	S	514	GTTGGATTCCGAGGTAACAAGGGCCAGGTGGCAGCATTGAATCGCCGGAG										
Mus musculus	RefSeq	ILMN_212997	ILMN_212997	CCK	NM_031161.2	NM_031161.2		12424	118130260	NM_031161.2	Cck	NP_112438.1	ILMN_1252990	000430025	S	393	AGGACTACGAATACCCATCGTAGTGGGCCAGCGTCTTGGCCCTGCTTGGA	9	-	121399158-121399185:121399186-121399207	9qF4	Mus musculus cholecystokinin (Cck), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218880	ILMN_218880	ANKS3	NM_028301.1	NM_028301.1		72615	19072789	NM_028301.1	Anks3	NP_082577.1	ILMN_2788154	003310575	S	1910	TGAGCCTCCCTGAGTTGTCAGGAGCCCTGGAAGACCGTGTCCATGAGATG	16	-	4857219-4857220:4857444-4857491	16qA1	Mus musculus ankyrin repeat and sterile alpha motif domain containing 3 (Anks3), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C81345; 2700067D09Rik; mKIAA1977	C81345; 2700067D09Rik; mKIAA1977
Mus musculus	MEEBO	ILMN_191688	ILMN_191688	MJ-500-33_192	MJ-500-33_192						MJ-500-33_192		ILMN_2481285	006510739	S	4	CCAAACCAGCCCTTGTTGCTTTTGCTAATCTCTCATGTCTTTTAACCCTA										
Mus musculus	RefSeq	ILMN_261460	ILMN_261460	LOC225594	NM_001034859.1	NM_001034859.1		225594	77861888	NM_001034859.1	LOC225594	NP_001030031.1	ILMN_2996973	007550161	S	2276	GGTGAGTCAGCTCAAGTAGAGAGAAGAGTTTAGCCCTTGCTGCAAGAAGG	18	-	60393988-60394037	18qD3	Mus musculus similar to CDNA sequence BC023105 (LOC225594), mRNA.					
Mus musculus	MEEBO	ILMN_216535	ILMN_216535	AI850995	scl44050.2_566				51829580	XM_488675	AI850995		ILMN_1253336	003370196	S	4508	CGCTTCCCCTGTCCATGAATGGCTTTGACGAGTTGAGTGTTGGTGGGAGA										
Mus musculus	RefSeq	ILMN_214097	ILMN_214097	OLFR139	NM_147003.1	NM_147003.1		259005	22208855	NM_147003.1	Olfr139	NP_667214.1	ILMN_2797772	002810465	S	420	CCGTGAAGTGCAGGGCACACTGGTGGGTATTTGCTGTACTGTCTCCTTCA	11	-	73858305-73858354	11qB4	Mus musculus olfactory receptor 139 (Olfr139), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR255-2; M5; MGC123735; RP23-221M24.1; MGC123736	MOR255-2; M5; MGC123735; RP23-221M24.1; MGC123736
Mus musculus	RefSeq	ILMN_209212	ILMN_209212	SERPINB7	NM_027548.2	NM_027548.2		116872	141802836	NM_027548.2	Serpinb7	NP_081824.1	ILMN_1234915	000580475	S	1560	CTCAGAAACCAGAATGAAGGCTAACTCATTCTTGAGAAACAAGATGATGC	1	+	109348939-109348988	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 7 (Serpinb7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 30162] [evidence ISO]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence ISO]	ovalbumin; megsin; 4631416M05Rik	ovalbumin; megsin; 4631416M05Rik
Mus musculus	RefSeq	ILMN_229635	ILMN_229635	ZBTB32	NM_021397.1	NM_021397.1		58206	10946741	NM_021397.1	Zbtb32	NP_067372.1	ILMN_2829268	000360142	S	1461	TGACAAAGAGTCCAAAGAATGAAAGGCAGAAGGGCTCAGCTAGGGCGGCC	7	-	30298612-30298661	7qB1	Mus musculus zinc finger and BTB domain containing 32 (Zbtb32), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; Any process that modulates the frequency, rate, or extent of production of a cytokine [goid 1817] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	FAXF; FAZF; PLZP; Rog; 4930524C15Rik; Tzfp	FAXF; FAZF; PLZP; Rog; 4930524C15Rik; Tzfp
Mus musculus	MEEBO	ILMN_191635	ILMN_191635	SCL0001199.1_86	scl0001199.1_86	AK013893.1			12851437	AK013893.1	scl0001199.1_86		ILMN_1226438	006660164	S	17	CCGCTCTGCAGAGGTATGGAGACGGCTACTGGGGGATCGTCGTCTGGTTT										
Mus musculus	RefSeq	ILMN_222899	ILMN_222899	4930579C15RIK	NM_027089.3	NM_027089.3		67753	141803488	NM_027089.3	4930579C15Rik	NP_081365.2	ILMN_2756396	000830133	S	624	CGCTGATGACACTGGTTCTGCTAATCCCCCTCTTGATATTCTGCTTTGCC	4	-	94586639-94586688	4qC5	Mus musculus RIKEN cDNA 4930579C15 gene (4930579C15Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization [goid 2080] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C81058; RP23-345A23.2; MGC107209; 1700028B15Rik; Afaf	C81058; RP23-345A23.2; MGC107209; 1700028B15Rik; Afaf
Mus musculus	MEEBO	ILMN_185674	ILMN_185674	GPAM	scl52356.25.1_163				34536826	NM_008149	Gpam		ILMN_2429032	006450315	S	14	GCATAGATATTTAACTTTACAAAAAGGACAGTGAAGTCCTAGATTTCCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sn-glycerol 3-phosphate = CoA + 1-acyl-sn-glycerol 3-phosphate [goid 4366] [evidence IDA]		
Mus musculus	RefSeq	ILMN_255763	ILMN_255763	NMS	NM_001011684.1	NM_001011684.1		433292	58652150	NM_001011684.1	Nms	NP_001011684.1	ILMN_3160159	001340364	S	587	CAACTTCCAGTAGACAGCAAGAGTCCCATGTCACCAGACGGTGTGCGCCT	1	+	39005500-39005512:39005513-39005520:39006728-39006756	1qB	Mus musculus neuromedin S (Nms), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence ISA]; The rhythm of the locomotor activity of an organism during its 24 hour activity cycle [goid 45475] [evidence ISA]	Interacting selectively with a G-protein-coupled receptor [goid 1664] [evidence ISA]	AB164466	AB164466
Mus musculus	RefSeq	ILMN_258728	ILMN_258728	TNF	NM_013693.1	NM_013693.1		21926	7305584	NM_013693.1	Tnf	NP_038721.1	ILMN_2899863	004050626	S	1138	CCTGAGTTCTGCAAAGGGAGAGTGGTCAGGTTGCCTCTGTCTCAGAATGA	17	-	34807873-34807922	17qB1	Mus musculus tumor necrosis factor (Tnf), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome [goid 1891] [evidence IDA]; Organelle consisting of networks of 60nm tubules organized around the microtubule organizing centre in some cell types. They transport receptors from late endosomes back to the plasma membrane for recycling and are also involved in membrane trafficking [goid 55037] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IGI]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process of apoptosis in transformed cells, cells that have undergone changes manifested by escape from control mechanisms, increased growth potential, alterations in the cell surface, karyotypic abnormalities, morphological and biochemical deviations from the norm [goid 6927] [evidence TAS]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IDA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA];  [goid 8625] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The migration of leukocytes from the blood vessels into the surrounding tissue [goid 45123] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of osteoclast differentiation [goid 45670] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process involving iron that activates or increases the rate of translational initiation [goid 45994] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46325] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IGI]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of hair follicle development [goid 51798] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IGI]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISO]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IDA]	Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence TAS]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IDA]	TNFSF2; MGC151434; DIF; Tnfsf1a; TNF-alpha; Tnfa; TNFalpha	TNFSF2; MGC151434; DIF; Tnfsf1a; TNF-alpha; Tnfa; TNFalpha
Mus musculus	Riken	ILMN_205407	ILMN_205407	E130018O15RIK	ri|E130018O15|PX00207H22|AK053452|3779					AK053452	E130018O15Rik		ILMN_1251905	001110546	S	3595	GCCAGAGGGCTGCTTTGGGGAAGTTTGACTCACCTACTTTCTTGGTCTGC										
Mus musculus	RefSeq	ILMN_198903	ILMN_198903	LOC244595	XM_146438.3	XM_146438.3			38089544	XM_146438.3	LOC244595		ILMN_2533336	006370180	S	1542	CCCAAATGGGGAAGGACTGCCACACTGGCCAGAGTATGGCGAGAAGGAAA										
Mus musculus	Riken	ILMN_202427	ILMN_202427	1700028G04RIK	ri|1700028G04|ZX00050L24|AK006458|1228					AK006458	1700028G04Rik		ILMN_1241855	004290056	S	869	AAGACCAAATGGGGCATCATCGAAGCTCCCATCTCCAGGACCTGAAGGAC										
Mus musculus	Riken	ILMN_206911	ILMN_206911	GTF2IRD1	ri|A130032D14|PX00122H03|AK079487|3050					AK079487	Gtf2ird1		ILMN_2583627	001740026	S	2552	TTCCTGCAACTCCCTTTGCGTCTGCCTCCGGTTGATGGAGAAAGGCTGCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211663	ILMN_211663	AK162044	NM_177597.2	NM_177597.2		211147	31341115	NM_177597.2	AK162044	NP_808265.1	ILMN_1257725	004260176	S	2087	AAAGGGGAAACTAACGAGAGGTATGGCCACACAGAAGTCAGTCACAGACC	15	+	26257037-26257086	15qB1	Mus musculus cDNA sequence AK162044 (AK162044), mRNA.				9630025C22	9630025C22
Mus musculus	Riken	ILMN_206833	ILMN_206833	BIRC6	ri|D930041P14|PX00202J14|AK086619|2240					AK086619	Birc6		ILMN_1227461	006250608	S	1854	CTCTTATCAGACCAGAGGCCATGTTACACCAACCAGAGCACTGCTGTAGC						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IC ]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213653	ILMN_213653	TAF12	NM_025579.1	NM_025579.1		66464	13385025	NM_025579.1	Taf12	NP_079855.1	ILMN_2826157	007040088	S	1211	CCAAAGGAACAAGCCAGCAGTAGGAGTTGGAGCACTTTCTCTGCCACCAG	4	+	131565304-131565353	4qD2.3	Mus musculus TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	 [goid 16986] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Taf2J; AW557038; 20kDa; 2810422D08Rik	Taf2J; AW557038; 20kDa; 2810422D08Rik
Mus musculus	RefSeq	ILMN_213653	ILMN_213653	TAF12	NM_025579.1	NM_025579.1		66464	13385025	NM_025579.1	Taf12	NP_079855.1	ILMN_2826161	000450678	S	833	CTGGTCCCTTTTCCCTGCCGTCTCAAAGAGAAGCAGTGTATCTACCAGAG	4	+	131564926-131564975	4qD2.3	Mus musculus TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	 [goid 16986] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Taf2J; AW557038; 20kDa; 2810422D08Rik	Taf2J; AW557038; 20kDa; 2810422D08Rik
Mus musculus	RefSeq	ILMN_200665	ILMN_200665	LOC381803	XM_358655.1	XM_358655.1			38085008	XM_358655.1	LOC381803		ILMN_2539567	002710719	S	131	GCTGGAGGAATTCTGCAGGGCCAAGGCAGCAAGATCAAGTAACCCTGGAT										
Mus musculus	RefSeq	ILMN_187482	ILMN_258511	RAX	NM_013833.2	NM_013833.2		19434	89274178	NM_013833.2	Rax	NP_038861.2	ILMN_2753549	004730091	S	1434	AGGCCAAACGGAAATTCAGCCTCGCTGTCAGAGGGACAAACTGCGGGTCC	18	-	66094478-66094527	18qE1	Mus musculus retina and anterior neural fold homeobox (Rax), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of the hypothalamus region of the forebrain, from its initial formation to its mature state [goid 21854] [evidence IMP]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	ey-1; Rx; E130303K03Rik; 7530406A22Rik; ey1	ey-1; Rx; E130303K03Rik; 7530406A22Rik; ey1
Mus musculus	Riken	ILMN_206571	ILMN_206571	D530020C15RIK	ri|D530020C15|PX00089M19|AK085215|1061					AK085215	D530020C15Rik		ILMN_1237512	003800273	S	825	GCGCCAGTTCAAGTAACGGGTGTTCTGACAGCTAAGGAGCGAGCTGAGAT										
Mus musculus	RefSeq	ILMN_213024	ILMN_213024	B3GNT2	NM_016888.4	NM_016888.4		53625	34328452	NM_016888.4	B3gnt2	NP_058584.3	ILMN_2632758	004200487	S	2419	AATGTTAAGCTGTAACATGTTAGATAAAGTTAACTCTTATTTTTGAATTT	11	-	22734927-22734976	11qA3.2	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IMP]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]	B3gnt1; AA409404; B3Galt6; AW260308; AA408337; Beta3gnt; beta-3Gnt	B3gnt1; AA409404; B3Galt6; AW260308; AA408337; Beta3gnt; beta-3Gnt
Mus musculus	RefSeq	ILMN_230045	ILMN_230045	4931417G12RIK	NM_027633.1	NM_027633.1		70979	58037226	NM_027633.1	4931417G12Rik	NP_081909.1	ILMN_2957167	003450706	S	1101	ATCTTAATGGCACAGCGAGGAAGAGCCTGGCAGCATCTCTGAGACTGGGC	6	-	113562684-113562733	6qE3	Mus musculus RIKEN cDNA 4931417G12 gene (4931417G12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221300	ILMN_221300	SLC22A12	NM_009203.2	NM_009203.2		20521	31982004	NM_009203.2	Slc22a12	NP_033229.2	ILMN_1251401	005420253	S	1799	GCCTGAGACCAAGAACTTACCACTGCCTGACACCATCCAAGACATCCAGA	19	-	6536740-6536789	19qA	Mus musculus solute carrier family 22 (organic anion/cation transporter), member 12 (Slc22a12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; The portion of the plasma membrane surrounding the brush border [goid 31526] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of urate into, out of, within or between cells [goid 15747] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of urate from one side of the membrane to the other. Urate is the anion of uric acid, 2,6,8-trioxypurine, the end product of purine metabolism in certain mammals and the main excretory product in uricotelic animals [goid 15143] [evidence IDA]	Slc22al2; Rst; AI987855; OAT4L; URAT1	Slc22al2; Rst; AI987855; OAT4L; URAT1
Mus musculus	RefSeq	ILMN_217667	ILMN_217667	ADA	NM_007398.3	NM_007398.3		11486	142353155	NM_007398.3	Ada	NP_031424.1	ILMN_1228696	000510482	S	1101	GAGAAGAAGGAACTTCTGGAACGGCTCTACAGAGAATACCAATAGCCACC	2	-	163556053-163556102	2qH3	Mus musculus adenosine deaminase (Ada), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IDA]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate) [goid 46061] [evidence IMP]; The process whereby a B cell in the spleen acquires the specialized features of a germinal center B cell. Germinal center B cells are rapidly cycling B cells which have downregulated IgD expression and exhibit high levels of binding by peanut agglutinin (PNA) [goid 2314] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of mature B cell apoptosis [goid 2906] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of germinal center formation [goid 2636] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA [goid 6157] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA [goid 6157] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence ISO]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate) [goid 46061] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate) [goid 46061] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate) [goid 46061] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA [goid 6157] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48541] [evidence IMP]; The chemical reactions and pathways resulting in the formation of hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46101] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IMP]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IDA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The chemical reactions and pathways resulting in the formation of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids [goid 46111] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IDA]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IDA]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IDA]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence ISO]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA [goid 6157] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IMP]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IMP]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence ISO]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IMP]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IMP]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217667	ILMN_217667	ADA	NM_007398.3	NM_007398.3		11486	142353155	NM_007398.3	Ada	NP_031424.1	ILMN_2686132	002630408	S	698	AGTAAAGAATGGCATTCATCGGACCGTCCACGCTGGCGAGGTGGGCTCTC	2	-	163556966-163556968:163557993-163558039	2qH3	Mus musculus adenosine deaminase (Ada), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IDA]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate) [goid 46061] [evidence IMP]; The process whereby a B cell in the spleen acquires the specialized features of a germinal center B cell. Germinal center B cells are rapidly cycling B cells which have downregulated IgD expression and exhibit high levels of binding by peanut agglutinin (PNA) [goid 2314] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of mature B cell apoptosis [goid 2906] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of germinal center formation [goid 2636] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA [goid 6157] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA [goid 6157] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence ISO]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate) [goid 46061] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate) [goid 46061] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate) [goid 46061] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA [goid 6157] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48541] [evidence IMP]; The chemical reactions and pathways resulting in the formation of hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46101] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IMP]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IDA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The chemical reactions and pathways resulting in the formation of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids [goid 46111] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IDA]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes [goid 6154] [evidence IDA]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IDA]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence ISO]; The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 46103] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA [goid 6157] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IMP]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IMP]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence ISO]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IMP]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IMP]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198891	ILMN_198891	GM392	XM_142430.3	XM_142430.3		235858	83006417	XM_142430.3	Gm392	XP_142430.3	ILMN_1240780	003120538	S	1261	AATCAGCACAGTCTTTCTGAGGCTCTTGCCCATTCTGAAGTCCACTGGGC	8	-	57910901-57910950	8qB2	PREDICTED: Mus musculus gene model 392, (NCBI) (Gm392), mRNA.					
Mus musculus	RefSeq	ILMN_210837	ILMN_210837	PEAR1	NM_028460.2	NM_028460.2		73182	74096449	NM_028460.2	Pear1	NP_082736.1	ILMN_3100125	006130044	A	4050	GCACATCTAAGTTCAGCCTTCCTAAGTTACCCGTTGAGTCCTGCTTGCCC	3	-	87553420-87553469	3qF1	Mus musculus platelet endothelial aggregation receptor 1 (Pear1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Pear1; Megf12	Pear1; Megf12
Mus musculus	RefSeq	ILMN_221899	ILMN_221899	EG328264	NM_177810.2	NM_177810.2		328264	31342960	NM_177810.2	EG328264	NP_808478.1	ILMN_2741780	002650075	S	3038	CAAAGGCGAGAATGACCTCTACAGCGGGGTAATGAAAACTGACCTCCAGC	13	+	60225075-60225124	13qB2	Mus musculus predicted gene, EG328264 (EG328264), mRNA.				A030007L22	A030007L22
Mus musculus	Riken	ILMN_206001	ILMN_206001	A830021G05RIK	ri|A830021G05|PX00154H16|AK043700|2563					AK043700	A830021G05Rik		ILMN_2576801	001300133	S	2348	GGCCCAAGACAGCAGGAACAAGTGCAAGTAAGTTTTTCGTTTCTTGGCGG										
Mus musculus	RefSeq	ILMN_184356	ILMN_315311	DENND4B	NM_201407.2	NM_201407.2		229541	119372291	NM_201407.2	Dennd4b	NP_958809.2	ILMN_1223090	005220603	S	4159	GTGGATTCTAGACATAGCCTGACTCCCTGTTCCCTTCACAGAGGAATTGG	3	+	90076884-90076922:90076859-90076869	3qF1	Mus musculus DENN/MADD domain containing 4B (Dennd4b), mRNA.				mKIAA0476; BC026996	mKIAA0476; BC026996
Mus musculus	RefSeq	ILMN_196346	ILMN_196346	DEFCR20	NM_183268.3	NM_183268.3		68009	154090948	NM_183268.3	Defcr20	NP_899091.2	ILMN_2675560	001260575	S	189	CCCAGAAGGATCTGCTCTTCATGAAAAATCGTCGAGAGATCTGATATGCT				8qA2	Mus musculus defensin related cryptdin 20 (Defcr20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		2010016F14Rik; cryptdin4	2010016F14Rik; cryptdin4
Mus musculus	RefSeq	ILMN_196346	ILMN_196346	DEFCR20	NM_183268.3	NM_183268.3		68009	154090948	NM_183268.3	Defcr20	NP_899091.2	ILMN_1230099	004230164	S	78	CCTGCTGGCCTTCCAGGTCCAGGCTGATCCTATCCAAAACACAGATGAGG				8qA2	Mus musculus defensin related cryptdin 20 (Defcr20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		2010016F14Rik; cryptdin4	2010016F14Rik; cryptdin4
Mus musculus	RefSeq	ILMN_198106	ILMN_198106	LOC210876	XM_139816.3	XM_139816.3			38081851	XM_139816.3	LOC210876		ILMN_2530514	000060682	S	2097	ATGTGCAGTTTGGCTGGGAGCTTCTCCTCCTTCTGTTGATATTGATGCTC										
Mus musculus	RefSeq	ILMN_240572	ILMN_240572	ZC4H2	NM_001003916.1	NM_001003916.1		245522	51491857	NM_001003916.1	Zc4h2	NP_001003916.1	ILMN_3157232	005050491	A	293	GCTACAGGAGAAGATGGCCCATGTGGAGGAACTCCGACTCATCCATGCTG	X	-	92840656-92840705	XqC3	Mus musculus zinc finger, C4H2 domain containing (Zc4h2), mRNA.				RP23-132H1.2; Gm372; MGC105164; mKIAA1166; KIAA1166	RP23-132H1.2; Gm372; MGC105164; mKIAA1166; KIAA1166
Mus musculus	RefSeq	ILMN_240572	ILMN_240572	ZC4H2	NM_001003916.1	NM_001003916.1		245522	51491857	NM_001003916.1	Zc4h2	NP_001003916.1	ILMN_3078052	006520474	I	1188	GGCTTCAGTGATTTCCTTCCCTCTGTTTTTGCCTTGGGTTCTGCAGGGAC	X	-	92835442-92835491	XqC3	Mus musculus zinc finger, C4H2 domain containing (Zc4h2), mRNA.				RP23-132H1.2; Gm372; MGC105164; mKIAA1166; KIAA1166	RP23-132H1.2; Gm372; MGC105164; mKIAA1166; KIAA1166
Mus musculus	RefSeq	ILMN_198740	ILMN_240572	ZC4H2	NM_001003916.1	NM_001003916.1		245522	51491857	NM_001003916.1	Zc4h2	NP_001003916.1	ILMN_1220315	004120070	S	1962	AGCTCCAGGACTCTATCCCTGCCAGGGGAGAAGAGGGAGCTATTTATCCT	X	-	92834668-92834717	XqC3	Mus musculus zinc finger, C4H2 domain containing (Zc4h2), mRNA.				RP23-132H1.2; Gm372; MGC105164; mKIAA1166; KIAA1166	RP23-132H1.2; Gm372; MGC105164; mKIAA1166; KIAA1166
Mus musculus	RefSeq	ILMN_219306	ILMN_219306	EBP	NM_007898.2	NM_007898.2		13595	31560706	NM_007898.2	Ebp	NP_031924.1	ILMN_2707043	001990112	S	1308	GCCACCCCGTTTATTTCTGGTTCTATTTTGTTTTCCTGAATGCTGTATGG	X	-	7762840-7762889	XqA1.1	Mus musculus phenylalkylamine Ca2+ antagonist (emopamil) binding protein (Ebp), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence TAS]	The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16125] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence TAS]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IMP]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]	Catalysis of the reaction: 5-alpha-cholest-7-en-3-beta-ol = 5-alpha-cholest-8-en-3-beta-ol [goid 47750] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction which results in unsaturation at C-7 in the B ring of sterols [goid 247] [evidence IDA]; Catalysis of the reaction which results in unsaturation at C-7 in the B ring of sterols [goid 247] [evidence IMP]	Td; Pabp; AI255399; mSI	Td; Pabp; AI255399; mSI
Mus musculus	MEEBO	ILMN_210962	ILMN_210962	5430405G24RIK	scl0237943.1_29	XM_152907.3			38091837	XM_152907.3	5430405G24Rik		ILMN_1253412	000460681	S	5462	AGTGATCCTTGTTCTGGTGGCTTTCTGTAAATATGTTTGCCCTAGTTGAA										
Mus musculus	Riken	ILMN_205257	ILMN_205257	ESR1	ri|E230025M07|PX00210M19|AK054182|2735					AK054182	Esr1		ILMN_2571180	007200066	S	2187	TGGGGTTCTTTCCTCTGGTTGATGGAGGTGTATAGTCTGCCTTACCAGGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of mitosis. Mitosis is the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 45839] [evidence NAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence NAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214191	ILMN_214191	SOX18	NM_009236.2	NM_009236.2		20672	124244105	NM_009236.2	Sox18	NP_033262.2	ILMN_2645321	003140112	S	1317	CTTTCGCATATGTATGTTAGGGTATGCAACAGCCTTTAGAGCTGGTGGCC	2	-	181404794-181404843	2qH4	Mus musculus SRY-box containing gene 18 (Sox18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Ragl; Ra; AI385749	Ragl; Ra; AI385749
Mus musculus	MEEBO	ILMN_216293	ILMN_216293	LOC384422	IGKV8-24_AJ235944_Ig_kappa_variable_8-24_169	XM_357640.1			38084380	XM_357640.1	LOC384422		ILMN_1226583	002340022	S	176	GGCCTGGTACCAGCAGAAACCAGGACAGTCTCCTAAACTTCTGGTATACT										
Mus musculus	RefSeq	ILMN_255006	ILMN_255006	4CYTL1	NM_001081106.1	NM_001081106.1		231162	124487394	NM_001081106.1	4Cytl1	NP_001074575.1	ILMN_2877029	004050746	S	519	CACACACCCAGGTCTACTTTTAGTGCCACTGTTAGACCTGCCACATGTCT	5	+	38130604-38130653	5qB3	Mus musculus cytokine-like 1 (4Cytl1), mRNA.		The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51091] [evidence IDA]; The chemical reactions and pathways resulting in the formation of chondroitin sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are chondroitin sulfate. Chondroitin sulfates are a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues; the repeat units consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate [goid 50650] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Cyt1; 4930443F05Rik; Gm147; C17	Cyt1; 4930443F05Rik; Gm147; C17
Mus musculus	RefSeq	ILMN_219547	ILMN_255006	4CYTL1	NM_001081106.1	NM_001081106.1		231162	124487394	NM_001081106.1	4Cytl1	NP_001074575.1	ILMN_1221146	007560717	S	540	AGTGCCACTGTTAGACCTGCCACATGTCTCTAGCTTCTGAAACACCAGTG	5	+	38130625-38130674	5qB3	Mus musculus cytokine-like 1 (4Cytl1), mRNA.		The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51091] [evidence IDA]; The chemical reactions and pathways resulting in the formation of chondroitin sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are chondroitin sulfate. Chondroitin sulfates are a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues; the repeat units consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate [goid 50650] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Cyt1; 4930443F05Rik; Gm147; C17	Cyt1; 4930443F05Rik; Gm147; C17
Mus musculus	MEEBO	ILMN_214267	ILMN_214267	NDRL	scl017990.3_27				6679029	NM_008681	Ndrl		ILMN_2646166	003890022	S	2469	GGGTTTGTAGCATTGGCCTCTTAAGCAATGCCAGCCTAATGCCCATGCTC										
Mus musculus	Riken	ILMN_203452	ILMN_203452	GS2NA-PENDING	ri|E430020H19|PX00099E13|AK088570|2996					AK088570	Gs2na-pending		ILMN_1229908	007200521	S	2860	GGGCAGAGTAGCCAGTGCCTAGCACCGTAGCTTTGGGAAACAGAATCAGG										
Mus musculus	RefSeq	ILMN_192190	ILMN_192190	ZDHHC4	NM_028379.3	NM_028379.3		72881	146141151	NM_028379.3	Zdhhc4	NP_082655.1	ILMN_1239603	001440685	S	1247	GCTACCCCCAGTTACAAGAAAAAGGAGAAATAGAGCGGAAGTGCCCTGCC				5qG2	Mus musculus zinc finger, DHHC domain containing 4 (Zdhhc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1810021D01Rik; 2900029I10Rik	1810021D01Rik; 2900029I10Rik
Mus musculus	RefSeq	ILMN_210915	ILMN_210915	SPR	NM_011467.1	NM_011467.1		20751	6755625	NM_011467.1	Spr	NP_035597.1	ILMN_2610531	006900414	S	800	GGCTTGCTGCAAAAGGACACCTTCCAGTCTGGAGCCCATGTGGACTTCTA	6	-	85084104-85084153	6qC3	Mus musculus sepiapterin reductase (Spr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 46146] [evidence IMP]; A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism [goid 16265] [evidence IMP]; The chemical reactions and pathways involving L-phenylalanine, the levorotatory isomer of 2-amino-3-phenylpropanoic acid [goid 6558] [evidence IMP]; The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42415] [evidence IMP]; The chemical reactions and pathways involving pteridine, pyrazino(2,3-dipyrimidine), the parent structure of pterins and the pteroyl group [goid 19889] [evidence IMP]; The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42428] [evidence IMP]; The process by which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron [goid 48667] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system that can be controlled at will [goid 50882] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: 7,8-dihydrobiopterin + NADP+ = sepiapterin + NADPH + H+ [goid 4757] [evidence IEA]	AA409688	AA409688
Mus musculus	MEEBO	ILMN_186733	ILMN_186733	A630038E17RIK	scl46340.18_484				27369863	NM_172602	A630038E17Rik		ILMN_2438041	000050255	S	8	GGAACTAGTGTCGTCCCTATAAAGGATGAACTGGAAGGATCTGTCTGGCC										
Mus musculus	MEEBO	ILMN_188947	ILMN_188947	CD44	scl012505.1_239				46048138	NM_009851	Cd44		ILMN_1228214	000020176	S	9	GTGGTTGCTGATTTTTCTGCTTTATAGATCTTTTAGAAGCCATTGTACAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The series of events that restore integrity to damaged tissue during or following an inflammatory response [goid 2246] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IMP]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_203897	ILMN_203897	D530014K02RIK	ri|D530014K02|PX00089I23|AK052563|1572					AK052563	D530014K02Rik		ILMN_1230142	004560209	S	1414	TGCAGCCCACCAAAGGTGAAAGATGGTGTGCAGGAGCTTAGTGCCCACTC										
Mus musculus	RefSeq	ILMN_198913	ILMN_198913	LOC234907	XM_134613.2	XM_134613.2			38089706	XM_134613.2	LOC234907		ILMN_1241660	000870021	S	197	CGTATTGACTCCCCAGATGGACACACAGGACCAGACGGAATCTCTTTGGG										
Mus musculus	RefSeq	ILMN_236017	ILMN_236017	OLFR901	NM_001011806.1	NM_001011806.1		258028	58801377	NM_001011806.1	Olfr901	NP_001011806.1	ILMN_3162504	003420192	S	757	GGAGCCTCAGCATTCATGTATCTTAAGCCTTCTCCTGTTGGATCTGTGGG	9	+	38238625-38238674	9qA5.1	Mus musculus olfactory receptor 901 (Olfr901), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR162-8	MOR162-8
Mus musculus	RefSeq	ILMN_217225	ILMN_217225	DEFB9	NM_139219.1	NM_139219.1		246079	21361231	NM_139219.1	Defb9	NP_631965.1	ILMN_2680517	004810142	S	105	CGGTGTATCAGAAATGGAACGGTGCCACAAGAAAGGAGGGTACTGTTATT	8	-	22992340-22992389	8qA2	Mus musculus defensin beta 9 (Defb9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		MGC129393	MGC129393
Mus musculus	RefSeq	ILMN_235906	ILMN_235906	NT5DC3	NM_001003910.1	NM_001003910.1		103220	51491846	NM_001003910.1	Nt5dc3	NP_001003910.1	ILMN_3050362	000020041	I	3755	TGCTGAGCTGGACAGCAGAAAGGGCCTGATCACTTCCATCTGCCGGCAAC	10	+	86239338-86239387	10qC1	Mus musculus 5'-nucleotidase domain containing 3 (Nt5dc3), transcript variant 3, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Gnn; MGC40847	Gnn; MGC40847
Mus musculus	Riken	ILMN_202746	ILMN_202746	4831423D23RIK	ri|4831423D23|PX00102K06|AK019512|1025					AK019512	4831423D23Rik		ILMN_2551962	002690280	S	724	CCTGGGTGTTACAGCAGGGGCACTGGCCTTGAGTGCTTTGCATTGTCAAG										
Mus musculus	RefSeq	ILMN_198050	ILMN_198050	LOC329394	XM_283726.2	XM_283726.2			38080977	XM_283726.2	LOC329394		ILMN_1217639	002750148	S	69	CATAGTGGCTGTGCTGGGGCCATGGAATCTTGCATCTCAGGCCAGCATCC										
Mus musculus	RefSeq	ILMN_208819	ILMN_208819	KCTD20	NM_025888.3	NM_025888.3		66989	78486541	NM_025888.3	Kctd20	NP_080164.2	ILMN_2778318	001770414	S	1988	AGCTGGACCCTCCTCTGGTGGGAAGCCACAGCGCCTGTCCATTAAATAGG	17	+	28695114-28695163	17qA3.3	Mus musculus potassium channel tetramerisation domain containing 20 (Kctd20), mRNA. XM_923925 XM_923928 XM_923933	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	AI451943; D17Ertd562e; 2410004N11Rik; AW541186	AI451943; D17Ertd562e; 2410004N11Rik; AW541186
Mus musculus	RefSeq	ILMN_250177	ILMN_250177	EIF3F	NM_025344.1	NM_025344.1		66085	21313619	NM_025344.1	Eif3f	NP_079620.1	ILMN_2924030	002710731	S	1118	CACTTGTGCTGGTCGAGGTTTTCACCACAGGGCTGAGACCGAAGTGGAGG	7	+	116078746-116078793:116079156-116079157	7qE3	Mus musculus eukaryotic translation initiation factor 3, subunit F (Eif3f), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	AA409853; MGC90606; Eif3s5; 0610037M02Rik	AA409853; MGC90606; Eif3s5; 0610037M02Rik
Mus musculus	RefSeq	ILMN_201174	ILMN_201174	LOC384892	XM_357924.1	XM_357924.1			38089623	XM_357924.1	LOC384892		ILMN_1242288	005340647	S	782	GCTACTGTGAATCTTGCCGGAATTGGTCAGAAGCTTTCGGGTTTAGCACC										
Mus musculus	RefSeq	ILMN_186242	ILMN_257812	SLCO2A1	NM_033314.3	NM_033314.3		24059	141802538	NM_033314.3	Slco2a1	NP_201571.2	ILMN_1246309	006550612	S	2881	GGAGCCCATGTAAGGAGGACCCAGTCTCCCACCCTCACAGTAGAGACAAG	9	+	102989027-102989076	9qF1	Mus musculus solute carrier organic anion transporter family, member 2a1 (Slco2a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of prostaglandins into, out of, within or between cells [goid 15732] [evidence IDA]	Catalysis of the transfer of prostaglandins from one side of the membrane to the other. A prostaglandin is any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 15132] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	2310021C19Rik; mPgt; Slc21a2; Pgt	2310021C19Rik; mPgt; Slc21a2; Pgt
Mus musculus	RefSeq	ILMN_210319	ILMN_210319	SEPT4	NM_011129.1	NM_011129.1		18952	6755119	NM_011129.1	Sept4	NP_035259.1	ILMN_2604393	004230307	S	1428	GAGATGTTACACAAAATCCAAAGACAGATGAAGGAGACTCACTAACTGGC	11	+	87403833-87403877:87403878-87403882	11qC	Mus musculus septin 4 (Sept4), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IMP]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of sperm mitochondria; the process by which they take on their characteristic morphology; they are flattened, elongated, and arranged circumferentially into a tight helical coil around the tail-dense fibers of the mature sperm [goid 30382] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Bh5; Pnutl2	Bh5; Pnutl2
Mus musculus	RefSeq	ILMN_220237	ILMN_220237	SLC39A8	NM_026228.2	NM_026228.2		67547	31541989	NM_026228.2	Slc39a8	NP_080504.2	ILMN_2719513	001660164	S	878	TTCGTGGGACTCGCTATTGGGACTCTTTTCTCAAACGCCATTTTCCAGCT	3	+	135518979-135519028	3qG3	Mus musculus solute carrier family 39 (metal ion transporter), member 8 (Slc39a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	4933419D20Rik; AA986696; BIGM103	4933419D20Rik; AA986696; BIGM103
Mus musculus	RefSeq	ILMN_220237	ILMN_220237	SLC39A8	NM_026228.2	NM_026228.2		67547	31541989	NM_026228.2	Slc39a8	NP_080504.2	ILMN_2729683	002480632	S	3038	GTAATAGAAGCCAAGTTATCTCAGGAATTATGTTTTCCTATAAGCCCAAA	3	+	135551183-135551232	3qG3	Mus musculus solute carrier family 39 (metal ion transporter), member 8 (Slc39a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	4933419D20Rik; AA986696; BIGM103	4933419D20Rik; AA986696; BIGM103
Mus musculus	RefSeq	ILMN_218392	ILMN_218392	2810485I05RIK	NM_176836.3	NM_176836.3		72826	118130382	NM_176836.3	2810485I05Rik	NP_789806.1	ILMN_2695217	005130255	S	3392	CCAGAGGTACTATGGTGTGCTGTATTGTGCTTTTAGCCTGTTTGCTGCAG	9	+	13650686-13650735	9qA1	Mus musculus RIKEN cDNA 2810485I05 gene (2810485I05Rik), mRNA.				C78303	C78303
Mus musculus	MEEBO	ILMN_223612	ILMN_223612	ESRRA	scl52911.9_189	NM_007953.1			6679692	NM_007953.1	Esrra		ILMN_2766521	002600577	S	1870	CTCTCCTCATCCGCATTGGGCATTATTGCCCCCCCTTGAAGCAATAACTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221348	ILMN_221348	RTN1	NM_153457.6	NM_153457.6		104001	56090142	NM_153457.6	Rtn1	NP_703187.2	ILMN_2758070	006380255	S	3089	CCTGTGGCTAGGCCTTTCTTGCCAAGTGCGCTGACACATAGTGGATCGCT	12	-	73313114-73313163	12qC3	Mus musculus reticulon 1 (Rtn1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rtn1-c; Rtn1-a; 0710005K15Rik; 4930441F12Rik; Rtn1-b; R75279; Nsp; MGC40985	Rtn1-c; Rtn1-a; 0710005K15Rik; 4930441F12Rik; Rtn1-b; R75279; Nsp; MGC40985
Mus musculus	RefSeq	ILMN_221348	ILMN_221348	RTN1	NM_153457.6	NM_153457.6		104001	56090142	NM_153457.6	Rtn1	NP_703187.2	ILMN_1254697	002570692	S	919	GGTGAACAAGATCCTAGCTGACCCCCTAGACCAGATGAAGGCAGAAGCCT	12	-	73409577-73409626	12qC3	Mus musculus reticulon 1 (Rtn1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rtn1-c; Rtn1-a; 0710005K15Rik; 4930441F12Rik; Rtn1-b; R75279; Nsp; MGC40985	Rtn1-c; Rtn1-a; 0710005K15Rik; 4930441F12Rik; Rtn1-b; R75279; Nsp; MGC40985
Mus musculus	RefSeq	ILMN_221348	ILMN_221348	RTN1	NM_153457.6	NM_153457.6		104001	56090142	NM_153457.6	Rtn1	NP_703187.2	ILMN_1235203	000990315	S	3425	CTGTAGTTCCTAATGGACTCAATCACAGACTCTGGATATTTGCACTTATG	12	-	73312778-73312827	12qC3	Mus musculus reticulon 1 (Rtn1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rtn1-c; Rtn1-a; 0710005K15Rik; 4930441F12Rik; Rtn1-b; R75279; Nsp; MGC40985	Rtn1-c; Rtn1-a; 0710005K15Rik; 4930441F12Rik; Rtn1-b; R75279; Nsp; MGC40985
Mus musculus	RefSeq	ILMN_191776	ILMN_317150	LOC100048316	XM_001479996.1	XM_001479996.1		100048316	149267968	XM_001479996.1	LOC100048316	XP_001480046.1	ILMN_1212748	007400398	S	319	TGTGGAAGCGCGGGCTAGGGCCACGGGACGAATTCCGGAGCTGGTGAGTT					PREDICTED: Mus musculus hypothetical protein LOC100048316 (LOC100048316), mRNA.					
Mus musculus	Riken	ILMN_205531	ILMN_205531	D130049D01RIK	ri|D130049D01|PX00185E11|AK051442|3364					AK051442	D130049D01Rik		ILMN_1213445	003710639	S	3159	CTAATGAAACAGAAACAGGTGGAAAGCAGCTGGGAGGAGTGGAGGGAGGG										
Mus musculus	RefSeq	ILMN_219148	ILMN_219148	NGLY1	NM_021504.2	NM_021504.2		59007	31981177	NM_021504.2	Ngly1	NP_067479.2	ILMN_2973115	003780164	S	2777	GCAGAAAGCAGATACTGTTTGAGACATGCTGTGATATACTATAGAGTAGG	14	+	15105069-15105118	14qA2	Mus musculus N-glycanase 1 (Ngly1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [evidence IDA]	Catalysis of the hydrolysis of an N4-(acetyl-beta-D-glucosaminyl)asparagine residue in which the N-acetyl-D-glucosamine residue may be further glycosylated, to yield a (substituted) N-acetyl-beta-D-glucosaminylamine and the peptide containing an aspartic residue [goid 224] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Png1; 1110002C09Rik; PNGase	Png1; 1110002C09Rik; PNGase
Mus musculus	MEEBO	ILMN_209969	ILMN_209969	BIRC7	scl19779.6.1_93	XM_283820.1			28489088	XM_283820.1	Birc7		ILMN_2600940	006380215	S	1439	GCATGGAGGAAAAGTTCCTGGTTTGTGTGAAGAGTGTTCTGCTGTAGCAT							A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence RCA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211387	ILMN_211387	ATG10	NM_025770.3	NM_025770.3		66795	114158678	NM_025770.3	Atg10	NP_080046.3	ILMN_2667100	006550326	S	946	CAGGGCGTGCACAGGTCGTTTTTGCCTAGGCACAGTTCTCCTGCTGTGGA	13	-	91075567-91075616	13qC3	Mus musculus autophagy-related 10 (yeast) (Atg10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent or non-covalent attachment of lipid moieties to an amino acid in a protein [goid 6497] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein [goid 31401] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Atg10l; 5430428K15Rik; AI852123; Apg10p; APG10; 5330424L23Rik; Agp10; Apg10l	Atg10l; 5430428K15Rik; AI852123; Apg10p; APG10; 5330424L23Rik; Agp10; Apg10l
Mus musculus	RefSeq	ILMN_211387	ILMN_211387	ATG10	NM_025770.3	NM_025770.3		66795	114158678	NM_025770.3	Atg10	NP_080046.3	ILMN_1222865	004810551	S	332	ATGAGTATCATGTCTTATACTCTTGTAGTTACCAAGTGCCGGTTCTTTAC	13	-	91180473-91180522	13qC3	Mus musculus autophagy-related 10 (yeast) (Atg10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent or non-covalent attachment of lipid moieties to an amino acid in a protein [goid 6497] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein [goid 31401] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Atg10l; 5430428K15Rik; AI852123; Apg10p; APG10; 5330424L23Rik; Agp10; Apg10l	Atg10l; 5430428K15Rik; AI852123; Apg10p; APG10; 5330424L23Rik; Agp10; Apg10l
Mus musculus	MEEBO	ILMN_191987	ILMN_191987	4930444G20RIK	scl0114671.1_166				51765476	XM_125511	4930444G20Rik		ILMN_2483969	005310725	S	5	ACTGCTGCTGACAAACCAAAAGGAGACCACGTGTTTTAGAAATCCTGTTT										
Mus musculus	Riken	ILMN_207431	ILMN_207431	4930427O07RIK	ri|4930427O07|PX00639F05|AK076741|2100					AK076741	4930427O07Rik		ILMN_1242332	005360162	S	1866	CTGCTGAAGGGGAGAGCAGCCTGGGTAGGCAGAGTTGGAGACATGATAAG										
Mus musculus	Riken	ILMN_207166	ILMN_207166	F830005K03RIK	ri|F830005K03|PL00004B17|AK089630|3370					AK089630	F830005K03Rik		ILMN_1216171	001030678	S	3069	GACCTGGCAAGAGCAGTGGTGTGGGGTAAGCGTGGTCAACTTCCTGTGTC										
Mus musculus	Riken	ILMN_207327	ILMN_207327	5730406F04RIK	ri|5730406F04|PX00643N15|AK077424|1751					AK077424	5730406F04Rik		ILMN_1243099	007400255	S	1076	GAGCACATCCTGGGGCCTTTCGTCAGGATTTTGGAGTGTGGAATCTGTGC										
Mus musculus	Riken	ILMN_205429	ILMN_205429	E330031I04RIK	ri|E330031I04|PX00212A16|AK054486|1354					AK054486	E330031I04Rik		ILMN_2572489	000580605	S	194	ACCGGCGTGCAGGTGCATAACAGCCTCACTGGCAGGAAGGAGCCGCTGAT										
Mus musculus	MEEBO	ILMN_217861	ILMN_217861	LOC384411	IGKV12-89_AJ235950_Ig_kappa_variable_12-89_265	XM_357629.1			38084319	XM_357629.1	LOC384411		ILMN_2688507	001660753	S	585	CTCAAGATCAGTAGCCTGCATCCTGACGATGTTGCAACGTATTACTGTCA										
Mus musculus	RefSeq	ILMN_210981	ILMN_210981	ATP5J	NM_016755.2	NM_016755.2		11957	31980637	NM_016755.2	Atp5j	NP_058035.1	ILMN_2632890	004860673	S	669	TGAGGAACATACAAAATCCATGTGGTAATTTGTCATGAATTAGTTGTACA	16	-	84828155-84828202:84828203-84828204	16qC3.3	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F (Atp5j), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210981	ILMN_210981	ATP5J	NM_016755.2	NM_016755.2		11957	31980637	NM_016755.2	Atp5j	NP_058035.1	ILMN_2611261	002060255	S	25	ACTCACCAGCTCCGGAATTCGTCCCGTGGCCCTAGCCCGCGCTTCCACAG	16	-	84835745-84835794	16qC3.3	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F (Atp5j), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210981	ILMN_210981	ATP5J	NM_016755.2	NM_016755.2		11957	31980637	NM_016755.2	Atp5j	NP_058035.1	ILMN_2962632	006860056	S	301	GACTCTGGCAGCTCGGGACTCAGTGCAAGTACAGAGACTCAGCCATGGTT	16	-	84831731-84831737:84831738-84831752:84835054-84835081	16qC3.3	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F (Atp5j), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218541	ILMN_218541	4931440F15RIK	NM_176829.1	NM_176829.1		216622	34850069	NM_176829.1	4931440F15Rik	NP_789799.1	ILMN_2789611	000990113	S	3156	GGGCAATGGTCTCATCTGTTCCTCCAGGTCATTCTGTTCCAGGCAGCCAG	11	-	29722463-29722512	11qA3.3	Mus musculus RIKEN cDNA 4931440F15 gene (4931440F15Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		RP23-76P22.2	RP23-76P22.2
Mus musculus	RefSeq	ILMN_214038	ILMN_214038	MPHOSPH10	NM_026483.2	NM_026483.2		67973	68303649	NM_026483.2	Mphosph10	NP_080759.2	ILMN_2643547	001710593	S	2098	ATATAATGTATAAATCTGTAAGTTTCTGTCATCGTTATGTTTTATAATAA	7	-	71521481-71521530	7qC	Mus musculus M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) (Mphosph10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		5730405D16Rik; 2810453H10Rik; AI326008	5730405D16Rik; 2810453H10Rik; AI326008
Mus musculus	RefSeq	ILMN_227706	ILMN_227706	OLFR493	NM_146310.1	NM_146310.1		258307	22129670	NM_146310.1	Olfr493	NP_666422.1	ILMN_3004890	004220048	S	263	TCCTGGTGGAGAAAAATACCATTTCCTATCTTGGGTGTACCATCCAGCTC	7	-	115490181-115490230	7qE3	Mus musculus olfactory receptor 493 (Olfr493), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-35	MOR204-35
Mus musculus	RefSeq	ILMN_222833	ILMN_222833	OLFR223	NM_146429.1	NM_146429.1		258421	33238927	NM_146429.1	Olfr223	NP_666640.1	ILMN_1223993	000730288	S	568	AAACTGGCATGTAGTGACACCACCACAAACGACCTGTCCCTAGCCTTGGG	11	-	59402972-59403021	11qB1.3	Mus musculus olfactory receptor 223 (Olfr223), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR256-30; RP23-210M6.1	MOR256-30; RP23-210M6.1
Mus musculus	RefSeq	ILMN_209214	ILMN_209214	OLFR628	NM_147097.1	NM_147097.1		259101	22128648	NM_147097.1	Olfr628	NP_667308.1	ILMN_1231661	001400286	S	371	CTAGCAATGCTTGGAGCAACAGATATTTCTCTTAGCACTTCCATCTTACC	7	+	103605940-103605989		Mus musculus olfactory receptor 628 (Olfr628), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR22-1; MGC129314; MGC129315	MOR22-1; MGC129314; MGC129315
Mus musculus	RefSeq	ILMN_209214	ILMN_209214	OLFR628	NM_147097.1	NM_147097.1		259101	22128648	NM_147097.1	Olfr628	NP_667308.1	ILMN_2593666	004480451	S	1373	GGCCTGGAATTCACAATTAGATTGCTCTGGCAGGGAAGTCTTCGTTTGCT	7	+	103607004-103607053		Mus musculus olfactory receptor 628 (Olfr628), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR22-1; MGC129314; MGC129315	MOR22-1; MGC129314; MGC129315
Mus musculus	MEEBO	ILMN_219026	ILMN_219026	RABGGTB	scl0002104.1_26				8571381	AF231926	Rabggtb		ILMN_2703263	001710221	S	469	AAAATGGCCTGCTGGAAGTCCCAGCATGCCCCGTGCTGGCTTGTCAGCAC								Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196940	ILMN_196940	LOC381283	XM_358544.1	XM_358544.1			38050350	XM_358544.1	LOC381283		ILMN_1233840	004230193	S	547	CACCCGAGTGTTAGCTGTAGGCTCCTGTACTGTTTGTGTGCACTTAGGGC										
Mus musculus	RefSeq	ILMN_221709	ILMN_221709	GPR156	NM_153394.2	NM_153394.2		239845	40254200	NM_153394.2	Gpr156	NP_700443.2	ILMN_2819586	006480523	S	4393	CACAGATATGTCACAGACTCTCAGGTGCTTAGCCATGGAGGCCCTGCTGG	16	+	38007425-38007474	16qB3	Mus musculus G protein-coupled receptor 156 (Gpr156), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-B receptors are G-protein coupled receptors [goid 4965] [evidence IEA]	Gababl	Gababl
Mus musculus	RefSeq	ILMN_221709	ILMN_221709	GPR156	NM_153394.2	NM_153394.2		239845	40254200	NM_153394.2	Gpr156	NP_700443.2	ILMN_1220124	002340600	S	4417	GTGCTTAGCCATGGAGGCCCTGCTGGTAGGACAGCATCTTCTGCTGTCTA	16	+	38007449-38007498	16qB3	Mus musculus G protein-coupled receptor 156 (Gpr156), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-B receptors are G-protein coupled receptors [goid 4965] [evidence IEA]	Gababl	Gababl
Mus musculus	RefSeq	ILMN_221709	ILMN_221709	GPR156	NM_153394.2	NM_153394.2		239845	40254200	NM_153394.2	Gpr156	NP_700443.2	ILMN_2739334	006450484	S	56	AGAGCACGCGCGTCCCAATCCCGGCCGCGGGCTCGGCGCATCTCTGCGGA	16	+	37916637-37916686	16qB3	Mus musculus G protein-coupled receptor 156 (Gpr156), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-B receptors are G-protein coupled receptors [goid 4965] [evidence IEA]	Gababl	Gababl
Mus musculus	RefSeq	ILMN_214015	ILMN_214015	RGS9	NM_011268.2	NM_011268.2		19739	146134421	NM_011268.2	Rgs9	NP_035398.2	ILMN_1250689	000670647	S	2414	GCCAGACAGGCATGTGGGCCAGAAGATATCCCTTGCTGCCTTAAAAACAA				11qE1	Mus musculus regulator of G-protein signaling 9 (Rgs9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	RGS9-1; MGC150268; MGC150267; Rgs9-2	RGS9-1; MGC150268; MGC150267; Rgs9-2
Mus musculus	RefSeq	ILMN_222334	ILMN_236588	KRT9	NM_201255.2	NM_201255.2		107656	146134378	NM_201255.2	Krt9	NP_957707.2	ILMN_2748165	006580048	S	2185	TGGAGGAAATAGAAGGCCATCTCAGTCCCAGTCCTCCTCAAAGTCTGCAG				11qD	Mus musculus keratin 9 (Krt9), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EPPK; Krt1-9; K9	EPPK; Krt1-9; K9
Mus musculus	MEEBO	ILMN_185682	ILMN_185682	2700024H10RIK	scl00108913.1_324						2700024H10Rik		ILMN_2429108	002030519	S	13	AATAGTACCTACGTCCCGCGACGGCTGTGAGGCCCAAACGAAAAACCCAG										
Mus musculus	Riken	ILMN_202282	ILMN_202282	2210015K02RIK	ri|2210015K02|ZX00053H07|AK008733|1374					AK008733	2210015K02Rik		ILMN_2548379	002140044	S	982	GTTGGTGTCTCATGCTGATTTGGTGGAGGCCTGGCTGTGTGGCGTTTGCT										
Mus musculus	RefSeq	ILMN_218899	ILMN_218899	TADA2L	NM_172562.3	NM_172562.3		217031	146149324	NM_172562.3	Tada2l	NP_766150.1	ILMN_2774803	001300025	S	1513	CCGGAGACTTGTGTTGGATTCTTGCTGTGAGAAGAAGGAGAGACACTGGG				11qC	Mus musculus transcriptional adaptor 2 (ADA2 homolog, yeast)-like (Tada2l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	D030022J10Rik; AV319371	D030022J10Rik; AV319371
Mus musculus	RefSeq	ILMN_208862	ILMN_231632	0610030E20RIK	XM_910556.2	XM_910556.2		68364	94377644	XM_910556.2	0610030E20Rik	XP_915649.1	ILMN_2655105	002100092	S	1190	TGAGGTCGTTTGTCAGGCCCCTTCATGTTTCTGCTTTCTTCCACTCATCT				6qC1	PREDICTED: Mus musculus RIKEN cDNA 0610030E20 gene, transcript variant 6 (0610030E20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_208862	ILMN_231632	0610030E20RIK	XM_910556.2	XM_910556.2		68364	94377644	XM_910556.2	0610030E20Rik	XP_915649.1	ILMN_1220374	006510338	S	4598	CCTAGTTAGGGGTTCCTCCTTTCCCAGAGCAAACAGAACAAGAGGTTGGG				6qC1	PREDICTED: Mus musculus RIKEN cDNA 0610030E20 gene, transcript variant 6 (0610030E20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_208862	ILMN_231632	0610030E20RIK	XM_910556.2	XM_910556.2		68364	94377644	XM_910556.2	0610030E20Rik	XP_915649.1	ILMN_2653890	006280719	S	2893	GGTCGGGACAAAGAACATTGGAACTTTTTGGGGGTCTGTGTTCTTAGAGC				6qC1	PREDICTED: Mus musculus RIKEN cDNA 0610030E20 gene, transcript variant 6 (0610030E20Rik), mRNA.					
Mus musculus	Riken	ILMN_205950	ILMN_205950	TRRP3	ri|C130099H21|PX00173C03|AK082063|2773					AK082063	Trrp3		ILMN_1217869	001850242	S	2359	GAGGAGGTGGTAGCAAGCACTAGCCCCTTGACATCAGACAGGATGAGCAA										
Mus musculus	RefSeq	ILMN_222718	ILMN_222718	BC052055	NM_182636.1	NM_182636.1		328643	32699142	NM_182636.1	BC052055	NP_872574.1	ILMN_2957299	006660743	S	1924	TTACTTCCTGAGGCCCGGGGAGAGACTTCAGCCCAAGCTGGTACAGGCTC	16	+	20511131-20511167:20511631-20511643	16qA3	Mus musculus cDNA sequence BC052055 (BC052055), mRNA.				MGC62438	MGC62438
Mus musculus	RefSeq	ILMN_221322	ILMN_221322	RBPJL	NM_009036.1	NM_009036.1		19668	6677688	NM_009036.1	Rbpjl	NP_033062.1	ILMN_2860717	001710168	S	2257	GTGCTCCCCGGATTCCATCCAAACCAGAGTCTGATGGAGCTGGCACCTTT	2	+	164240749-164240798	2qH3	Mus musculus recombination signal binding protein for immunoglobulin kappa J region-like (Rbpjl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rbpsuhl; RBP-L	Rbpsuhl; RBP-L
Mus musculus	RefSeq	ILMN_221322	ILMN_221322	RBPJL	NM_009036.1	NM_009036.1		19668	6677688	NM_009036.1	Rbpjl	NP_033062.1	ILMN_2733957	001740543	S	1696	GGAAAAAGAGCAGGAAGGAGAGAGATAGCTCACCTGACCTCAGGCCACTC	2	+	164240188-164240237	2qH3	Mus musculus recombination signal binding protein for immunoglobulin kappa J region-like (Rbpjl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rbpsuhl; RBP-L	Rbpsuhl; RBP-L
Mus musculus	MEEBO	ILMN_185331	ILMN_185331	2610301H18RIK	scl4692.1.1_284						2610301H18Rik		ILMN_2426153	005560736	S	19	TACTGTACATTATCTCAAGATTATCCCATCATTACTTTTTCTGTAAGAAA										
Mus musculus	Riken	ILMN_205974	ILMN_205974	PTPRR	ri|D130067J21|PX00185F04|AK051719|2515					AK051719	Ptprr		ILMN_1245367	001260328	S	2231	TGATTGCCCCATGAGCTGTTAGCTTGTCGGTTGGCTGGGACTGTGTGCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	Riken	ILMN_207339	ILMN_207339	LGTN	ri|6820404L22|PX00649B08|AK078472|1210					AK078472	Lgtn		ILMN_1242762	000580487	S	860	TGCCCTAGGCTTAGGAATGGTTTTCCCTGCCTTGTGCTGTGGTGATGTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199175	ILMN_199175	LOC276803	XM_204561.2	XM_204561.2			38091596	XM_204561.2	LOC276803		ILMN_2534316	005870768	S	342	GCACGCATGTGCACTCGTCATGGATTCTGGTAACGGGGTCACACATACAG										
Mus musculus	RefSeq	ILMN_212500	ILMN_321416	9530002K18RIK	XR_035343.1	XR_035343.1		77424	149270051	XR_035343.1	9530002K18Rik		ILMN_2627177	002030022	S	419	TATGTGGAATACAGAAGATTGAAGAATATTTCCAATGAGAACAAGGAACT				18qB3	PREDICTED: Mus musculus RIKEN cDNA 9530002K18 gene (9530002K18Rik), misc RNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_246767	ILMN_246767	TPD52	NM_009412.2	NM_009412.2		21985	70608203	NM_009412.2	Tpd52	NP_033438.1	ILMN_3091288	001230673	A	2014	ATGACATGCTGCCATTCCTGGTTGCTGCTCGGATGCAATGGAAACTATGC	3	-	8929638-8929687	3qA1	Mus musculus tumor protein D52 (Tpd52), transcript variant 5, mRNA.			Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	mD52; AI043038	mD52; AI043038
Mus musculus	RefSeq	ILMN_216804	ILMN_216804	FGFR1	NM_010206.2	NM_010206.2		14182	120952640	NM_010206.2	Fgfr1	NP_034336.2	ILMN_2727068	004590433	S	3119	GGAGGACTCTGTCTTCTCTCATGAGCCGTTACCTGAGGAGCCCTGTCTGC	8	+	26684297-26684346	8qA2	Mus musculus fibroblast growth factor receptor 1 (Fgfr1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The process by which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons [goid 48699] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a mesenchymal cell [goid 48762] [evidence IGI]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [evidence TAS]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Flt-2; Fgfr-1; FLG; AW208770	Flt-2; Fgfr-1; FLG; AW208770
Mus musculus	RefSeq	ILMN_216804	ILMN_216804	FGFR1	NM_010206.2	NM_010206.2		14182	120952640	NM_010206.2	Fgfr1	NP_034336.2	ILMN_2675581	000510102	S	904	TTCGCTGTCGGCTTCGCGATGATGTGCAGAGCATCAACTGGCTGCGGGAT	8	+	26666046-26666095	8qA2	Mus musculus fibroblast growth factor receptor 1 (Fgfr1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The process by which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons [goid 48699] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a mesenchymal cell [goid 48762] [evidence IGI]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [evidence TAS]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Flt-2; Fgfr-1; FLG; AW208770	Flt-2; Fgfr-1; FLG; AW208770
Mus musculus	Riken	ILMN_206807	ILMN_206807	D630008M13RIK	ri|D630008M13|PX00196A16|AK085304|876					AK085304	D630008M13Rik		ILMN_2582834	001980544	S	443	TCCGTATAGCTACTACTACCCCATGGTGAGGACCTGGCTGCAGGGTGGGA										
Mus musculus	MEEBO	ILMN_222989	ILMN_222989	CMAR	scl0057358.1_0	NM_020612.1			10181151	NM_020612.1	Cmar		ILMN_2757733	001170500	S	14	GGACATGAAAGGACCCTGTGAGCCGATTGTCCTATCTCCAGCGGCCCTGT										
Mus musculus	RefSeq	ILMN_248463	ILMN_248463	EG625321	NM_001037924.2	NM_001037924.2		625321	142348957	NM_001037924.2	EG625321	NP_001033013.1	ILMN_3162359	000580242	S	1262	CAGTGCCCCCCATGTCTGTTCTATCTTATGTGCAACAGCACACTTGCATC	7	-	111682051-111682100	7qE3	Mus musculus predicted gene, EG625321 (EG625321), mRNA.					
Mus musculus	RefSeq	ILMN_226744	ILMN_226744	KLK9	NM_028660.1	NM_028660.1		101533	39841068	NM_028660.1	Klk9	NP_082936.1	ILMN_2879293	002630292	S	862	AAGCCCCAGCTTTTTTGATGGGTGTCAAAGCACCCCCGCACGCCCCATGA	7	+	43664255-43664304	7qB4	Mus musculus kallikrein related-peptidase 9 (Klk9), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MGC130095; MGC130096; 1200016C12Rik; AI324041	MGC130095; MGC130096; 1200016C12Rik; AI324041
Mus musculus	RefSeq	ILMN_199654	ILMN_199654	LOC383785	XM_357248.1	XM_357248.1			38075660	XM_357248.1	LOC383785		ILMN_1213841	002100048	S	487	GGTTGGTGTGGGAACAGCACGGCTCTGGAGGAACTGGCATTTGTTTGCAG										
Mus musculus	RefSeq	ILMN_198408	ILMN_198408	LOC226017	XM_129164.2	XM_129164.2			38084876	XM_129164.2	LOC226017		ILMN_1245043	003370286	S	727	ATCAAGCTCAAAGGCTACACCAACTGGGCCATCGGCCTGAGGTTGCTCAG										
Mus musculus	RefSeq	ILMN_221765	ILMN_221765	MAPT	NM_010838.3	NM_010838.3		17762	84370354	NM_010838.3	Mapt	NP_034968.3	ILMN_1257750	004060307	S	837	GTCCAGTCCAAGTGTGGCTCGAAGGATAATATCAAACACGTCCCGGGTGG	11	+	104164322-104164371	11qE1	Mus musculus microtubule-associated protein tau (Mapt), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mtapt; AI413597; AW045860; Tau	Mtapt; AI413597; AW045860; Tau
Mus musculus	RefSeq	ILMN_209249	ILMN_209249	FGD1	NM_008001.3	NM_008001.3		14163	118131060	NM_008001.3	Fgd1	NP_032027.2	ILMN_2594009	001690296	S	2952	GGCACAAGGCATGGTTTGTGGTTCCTGAGAATGAACCCTTGGTGCTGTAC	X	+	147522587-147522636	XqF3	Mus musculus FYVE, RhoGEF and PH domain containing 1 (Fgd1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	ZFYVE3	ZFYVE3
Mus musculus	Riken	ILMN_205068	ILMN_205068	D330011G23RIK	ri|D330011G23|PX00190J08|AK052232|4476					AK052232	D330011G23Rik		ILMN_1241260	007040424	S	4096	CTGAGTACATTCCTGCCCACGACATGGCTCCTGAGACAGCCACTCAGACA										
Mus musculus	Riken	ILMN_207119	ILMN_207119	TRP53	ri|E330026I23|PX00675H12|AK087834|2901					AK087834	Trp53		ILMN_2585183	004050484	S	2228	GGCTGCAGATATGACAAGAGGGGTTGGGAACAGGTGGGGGCCTAGTTTAC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of glucose [goid 42149] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell [goid 2347] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IGI]; The expansion of a T cell population by cell division during an immune response [goid 2309] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A cell cycle checkpoint that arrests cell cycle progression G1 phase in response to DNA damage [goid 31571] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IGI]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The process whereby a lymphoid progenitor cell becomes committed to become any type of B cell [goid 2326] [evidence IMP]; The process by which a lymphoid progenitor cell becomes committed to becoming any type of T cell [goid 2360] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 30330] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The formation of a covalent cross-link between RNA and a protein [goid 18144] [evidence IEA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISO]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IGI]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISO]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IGI]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence ISO]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 30330] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_261249	ILMN_261249	SLC15A2	NM_021301.1	NM_021301.1		57738	10946597	NM_021301.1	Slc15a2	NP_067276.1	ILMN_2988480	004120750	S	3632	CATGTGTTCCTAGGAGAAAACGTTCACGGCCCCTCGTATGAAAGACCTCA	16	-	36669728-36669777	16qB3	Mus musculus solute carrier family 15 (H+/peptide transporter), member 2 (Slc15a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Catalysis of the transfer of oligopeptide from one side of the membrane to the other. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15334] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	C78862; Pept2; 8430408C16Rik	C78862; Pept2; 8430408C16Rik
Mus musculus	MEEBO	ILMN_191994	ILMN_191994	PML	scl35776.11_344				9506978	NM_008884	Pml		ILMN_1256356	001740427	S	20	GCTGCTTGTCTTCAGTTGATGGTGGATTAATGACAGAAGGAAGCCCCGCC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle [goid 6977] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I [goid 45343] [evidence IDA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of PML bodies, a class of nuclear body; they react against SP100 auto-antibodies (PML = promyelocytic leukemia) [goid 30578] [evidence IDA];  [goid 7182] [evidence IMP];  [goid 7184] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_191994	ILMN_191994	PML	scl35776.11_344				9506978	NM_008884	Pml		ILMN_2768663	002490328	S	1473	GCACCGTCCCTGAAAAAAAGATCCTCCTGCCCAACAACAATCATGTTACC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle [goid 6977] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I [goid 45343] [evidence IDA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of PML bodies, a class of nuclear body; they react against SP100 auto-antibodies (PML = promyelocytic leukemia) [goid 30578] [evidence IDA];  [goid 7182] [evidence IMP];  [goid 7184] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_219228	ILMN_219228	NME2	NM_008705.4	NM_008705.4		18103	117606273	NM_008705.4	Nme2	NP_032731.1	ILMN_2705935	003830025	S	348	CCTGAAAGACCGTCCTTTCTTCCCGGGGCTGGTGAAGTACATGAACTCGG	11	-	93814130-93814179	11qD	Mus musculus non-metastatic cells 2, protein (NM23B) expressed in (Nme2), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	MGC107563; NM23B; MGC107562; nm23-M2	MGC107563; NM23B; MGC107562; nm23-M2
Mus musculus	RefSeq	ILMN_219228	ILMN_219228	NME2	NM_008705.4	NM_008705.4		18103	117606273	NM_008705.4	Nme2	NP_032731.1	ILMN_3150658	003170731	A	352	AAAGACCGTCCTTTCTTCCCGGGGCTGGTGAAGTACATGAACTCGGGGCC	11	-	93814126-93814175	11qD	Mus musculus non-metastatic cells 2, protein (NM23B) expressed in (Nme2), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	MGC107563; NM23B; MGC107562; nm23-M2	MGC107563; NM23B; MGC107562; nm23-M2
Mus musculus	RefSeq	ILMN_219228	ILMN_219228	NME2	NM_008705.4	NM_008705.4		18103	117606273	NM_008705.4	Nme2	NP_032731.1	ILMN_3071907	002630193	I	3	ACAGAGACGACTGGCAAGACCAGGCAGCCTGAGCGTCCCGGGTTGGGCAG	11	-	93817269-93817318	11qD	Mus musculus non-metastatic cells 2, protein (NM23B) expressed in (Nme2), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	MGC107563; NM23B; MGC107562; nm23-M2	MGC107563; NM23B; MGC107562; nm23-M2
Mus musculus	MEEBO	ILMN_195307	ILMN_195307	A230055C15	scl42410.1.3_0						A230055C15		ILMN_2514398	002490347	S	12	TGGGGCAGATGGAGATCTATTTAATCTAAAACACTTATGTCGAATGCTGG										
Mus musculus	RefSeq	ILMN_209826	ILMN_209826	SEPHS1	NM_175400.5	NM_175400.5		109079	42734497	NM_175400.5	Sephs1	NP_780609.3	ILMN_2599570	000460414	S	5117	CAGTGTGATTGTGGGACAAGGCTGATGCAGCCACCATTGTATTTCAGGAA	2	+	4831401-4831450	2qA1	Mus musculus selenophosphate synthetase 1 (Sephs1), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + selenide + H2O = AMP + selenophosphate + phosphate [goid 4756] [evidence IEA]	AW111620; AI505014; 1110046B24Rik; SELD; SPS; SPS1; AA589574	AW111620; AI505014; 1110046B24Rik; SELD; SPS; SPS1; AA589574
Mus musculus	Riken	ILMN_203269	ILMN_203269	9430016C22RIK	ri|9430016C22|PX00107N08|AK034629|2083					AK034629	9430016C22Rik		ILMN_1255612	005130341	S	1879	ATGCAGGGGTCATCAGGGGTCGTGGTACTCAGTAAAGTGTCTTCCTTTTC										
Mus musculus	RefSeq	ILMN_234107	ILMN_234107	RPS26	NM_013765.1	NM_013765.1		27370	7305446	NM_013765.1	Rps26	NP_038793.1	ILMN_2794676	004540414	S	245	TAGCAAGGTTGTTAGGAATCGATCCCGCGAGGCCCGGAAGGACCGAACAC	10	-	128062285-128062334	10qD3	Mus musculus ribosomal protein S26 (Rps26), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	Riken	ILMN_205103	ILMN_205103	SLC12A7	ri|D830037E05|PX00199K10|AK052910|1815					AK052910	Slc12a7		ILMN_1222160	002710561	S	1743	TCCTGAGGGAGACTTCGGCTTTGAAATTAAATGACCTCTGGGCCTCACAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191163	ILMN_191163	2410017P09RIK	scl0069709.1_196				51766778	XM_484108	2410017P09Rik		ILMN_2484723	004880296	S	7	GCCAGTATTTGAAGAAGTTCCGATTGTTCAAGTGACTGTAGTTCTGGGAG										
Mus musculus	RefSeq	ILMN_200037	ILMN_200037	LOC383162	XM_356903.1	XM_356903.1			38079969	XM_356903.1	LOC383162		ILMN_1252885	002370315	S	15	GTCCAGGAGTGTAGCTGATCCTTTGCTCTGCCTCAATATCTGTGTCGGGG										
Mus musculus	RefSeq	ILMN_215616	ILMN_215616	TCF7	NM_009331.3	NM_009331.3		21414	142348105	NM_009331.3	Tcf7	NP_033357.1	ILMN_2717975	004390180	S	2083	CCTTGCCACATTCTAGAAACTCTTTTTGAGCCAAACTTAACCCTGAGCCT	11	-	52066211-52066260	11qB1.3	Mus musculus transcription factor 7, T-cell specific (Tcf7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 30538] [evidence IGI]; The process by which the anatomical structures of the hindgut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48619] [evidence IGI]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	TCF-1; AI465550; Tcf1	TCF-1; AI465550; Tcf1
Mus musculus	RefSeq	ILMN_199872	ILMN_199872	LOC384021	XM_357374.1	XM_357374.1			38078467	XM_357374.1	LOC384021		ILMN_1224017	003940373	S	449	CTATGTCACCTGGAGCACAACCAGCTCCACTGAGACTTGTCCAGCGCAAG										
Mus musculus	Riken	ILMN_203571	ILMN_203571	9530007E02RIK	ri|9530007E02|PX00111N05|AK035265|3417					AK035265	9530007E02Rik		ILMN_1222650	004490228	S	3318	GTGCTGGGGATGGAACCCAGGGATTTGCAAGGCAGAACTCAGCCAATAAG										
Mus musculus	RefSeq	ILMN_211987	ILMN_211987	BIN3	NM_021328.3	NM_021328.3		57784	118130496	NM_021328.3	Bin3	NP_067303.1	ILMN_1216538	002260121	S	1488	GTGTACTTTAACTGACACCAAGAGGGAGCTGTCACAGCTTTGCCACAGCC	14	+	70537774-70537823	14qD2	Mus musculus bridging integrator 3 (Bin3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of making a septum that spans the plasma membrane interface between progeny cells following cytokinesis. The progeny cells that form a barrier septum are not able to exchange intracellular material [goid 917] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700015F07Rik	1700015F07Rik
Mus musculus	RefSeq	ILMN_218562	ILMN_218562	MIP	NM_008600.4	NM_008600.4		17339	145966857	NM_008600.4	Mip	NP_032626.2	ILMN_1254280	000830400	S	1821	CTCTCGGCTATCCTTTCTGCTAACTCTCCCTCATGACCCAGATATCGATC				10qD3	Mus musculus major intrinsic protein of eye lens fiber (Mip), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence NAS]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IDA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence IMP]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence NAS]	Hfi; Cat; Svl; Lop; Aqp0; MIP26; shrivelled	Hfi; Cat; Svl; Lop; Aqp0; MIP26; shrivelled
Mus musculus	MEEBO	ILMN_210017	ILMN_210017	MGC18837	scl0235043.1_144	NM_178577.3			32129252	NM_178577.3	MGC18837		ILMN_2601379	005810541	S	607	TGCGGGACAAGGACCCCAAGTACAGTGCTCTACGCCGGAAGTTCTACCAC										
Mus musculus	RefSeq	ILMN_240054	ILMN_240054	HIST1H3E	NM_178205.1	NM_178205.1		319151	30061340	NM_178205.1	Hist1h3e	NP_835512.1	ILMN_2951691	001190047	S	298	TACCTCGTGGGTCTGTTTGAGGACACCAACCTGTGCGCCATCCACGCCAA	13	-	23653887-23653936	13qA3.1	Mus musculus histone cluster 1, H3e (Hist1h3e), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H3-f	H3-f
Mus musculus	Riken	ILMN_204010	ILMN_204010	9830132E05RIK	ri|9830132E05|PX00118I20|AK036542|3656					AK036542	9830132E05Rik		ILMN_2561677	006290750	S	3304	ACCAGAGGTCCGTAGTATTCCAGTCCACCTGTGATCCTCCAGCCGTGACT										
Mus musculus	MEEBO	ILMN_220275	ILMN_220275	BTF3	scl0218490.3_0	NM_145455.1			21703903	NM_145455.1	Btf3		ILMN_2720034	000610598	S	402	GAAATGCTTCCCAGCATCCTCAACCAGCTTGGTGCAGACAGCCTGACTAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]			
Mus musculus	Riken	ILMN_203982	ILMN_203982	A530020G20RIK	ri|A530020G20|PX00140N07|AK040725|2683					AK040725	A530020G20Rik		ILMN_2561469	004730241	S	1088	GGCTGAATCTTCTCCAGCGTGAGTCCCAGGAACACAAAGCCCTCAGAGGA										
Mus musculus	RefSeq	ILMN_230386	ILMN_230386	MAPK8IP2	NM_021921.2	NM_021921.2		60597	31982683	NM_021921.2	Mapk8ip2	NP_068740.2	ILMN_3161718	003310142	S	3194	CCCACAGGCCATCTGCTTTTGCCGCTAACACCCCTTCAGTCCAGCGAGTA	15	+	89292754-89292803	15qE3	Mus musculus mitogen-activated protein kinase 8 interacting protein 2 (Mapk8ip2), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence ISO]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IPI]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	R75148; AW049958; 3230402N03Rik; Jip2; AI847694	R75148; AW049958; 3230402N03Rik; Jip2; AI847694
Mus musculus	Riken	ILMN_205488	ILMN_205488	D030044M21RIK	ri|D030044M21|PX00180K12|AK050956|979					AK050956	D030044M21Rik		ILMN_2572938	006770307	S	459	GCATCAAAGAGAGAAAAGAATGTGGGGCGATTCCGCTGCTCCACACCCCC										
Mus musculus	RefSeq	ILMN_188094	ILMN_188094	ZFP352	NM_153102.2	NM_153102.2		236537	142363529	NM_153102.2	Zfp352	NP_694742.1	ILMN_1227634	002140463	S	1980	AAGAAACTGTGTAACATGTATGTGCCTGATCTGTCCAGAATGTGCAGAGC	4	+	89892097-89892146	4qC5	Mus musculus zinc finger protein 352 (Zfp352), mRNA.				2czf48	2czf48
Mus musculus	RefSeq	ILMN_199464	ILMN_256057	4930408G06RIK	XM_979781.2	XM_979781.2		68179	149233999	XM_979781.2	4930408G06Rik	XP_984875.2	ILMN_2535301	001090274	S	2319	GTCAGGCCACATCACCAAGGAGGACTTACCAACAATCTATCACAAGCTCT				1qC1.3	PREDICTED: Mus musculus RIKEN cDNA 4930408G06 gene (4930408G06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219588	ILMN_256057	4930408G06RIK	XM_979781.2	XM_979781.2		68179	149233999	XM_979781.2	4930408G06Rik	XP_984875.2	ILMN_2710870	004250341	S	4121	GAGAAAGTGCCGCCTGGAAATTTGCAAGTCCTCGGATGGTTTCAGCGGGC				1qC1.3	PREDICTED: Mus musculus RIKEN cDNA 4930408G06 gene (4930408G06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214588	ILMN_245064	1700018C11RIK	NM_029324.2	NM_029324.2		75524	142377569	NM_029324.2	1700018C11Rik	NP_083600.1	ILMN_2649579	005490215	S	441	GAGACCCTGAGGGTTCTAGTGGCAGTTCCACACAGGCTCTGAGCTGCTCA	4	-	63268305-63268345:63268346-63268354	4qC1	Mus musculus RIKEN cDNA 1700018C11 gene (1700018C11Rik), mRNA.				bM230C2.3	bM230C2.3
Mus musculus	RefSeq	ILMN_210104	ILMN_210104	CHFR	NM_172717.2	NM_172717.2		231600	142377331	NM_172717.2	Chfr	NP_766305.1	ILMN_1213618	001030259	S	1533	ATATGCACCTGCTGCTTCCAGCCTATGCCTGACCGGAGAGCTGAACGGGA	5	+	110587859-110587908	5qF	Mus musculus checkpoint with forkhead and ring finger domains (Chfr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IMP]	RNF116; C230082M18; 5730484M20Rik	RNF116; C230082M18; 5730484M20Rik
Mus musculus	RefSeq	ILMN_210104	ILMN_210104	CHFR	NM_172717.2	NM_172717.2		231600	142377331	NM_172717.2	Chfr	NP_766305.1	ILMN_2751018	002350433	S	552	GATCCCCAGGTTCCACTATTGTCACCCATGGCTCAGACATGCTTAGAGGA	5	+	110573853-110573902	5qF	Mus musculus checkpoint with forkhead and ring finger domains (Chfr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IMP]	RNF116; C230082M18; 5730484M20Rik	RNF116; C230082M18; 5730484M20Rik
Mus musculus	RefSeq	ILMN_210104	ILMN_210104	CHFR	NM_172717.2	NM_172717.2		231600	142377331	NM_172717.2	Chfr	NP_766305.1	ILMN_1213971	005700356	S	2660	ACAAATTGACTAAAATTAGGAATAGCCTCATATTTGGAAGAATGAGCATA	5	+	110600505-110600554	5qF	Mus musculus checkpoint with forkhead and ring finger domains (Chfr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IMP]	RNF116; C230082M18; 5730484M20Rik	RNF116; C230082M18; 5730484M20Rik
Mus musculus	RefSeq	ILMN_211415	ILMN_211415	EBPL	NM_026598.2	NM_026598.2		68177	142374298	NM_026598.2	Ebpl	NP_080874.1	ILMN_2725035	005810722	S	225	GCGCTTTTGTCTACTTGTCTATAGTAGGAAATGTTGCAGATTCCCAAGGC	14	-	61966224-61966273	14qD1	Mus musculus emopamil binding protein-like (Ebpl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16125] [evidence IEA]	Catalysis of the reaction: 5-alpha-cholest-7-en-3-beta-ol = 5-alpha-cholest-8-en-3-beta-ol [goid 47750] [evidence IEA]	EBRP; 5730442K12Rik	EBRP; 5730442K12Rik
Mus musculus	RefSeq	ILMN_211415	ILMN_211415	EBPL	NM_026598.2	NM_026598.2		68177	142374298	NM_026598.2	Ebpl	NP_080874.1	ILMN_1250555	000110630	S	718	GACCAGACATTCCGATCTGTGCTCCTTTTTTACAGTGTTTTGAAGCGGCC	14	-	61959903-61959952	14qD1	Mus musculus emopamil binding protein-like (Ebpl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16125] [evidence IEA]	Catalysis of the reaction: 5-alpha-cholest-7-en-3-beta-ol = 5-alpha-cholest-8-en-3-beta-ol [goid 47750] [evidence IEA]	EBRP; 5730442K12Rik	EBRP; 5730442K12Rik
Mus musculus	Riken	ILMN_202605	ILMN_202605	SAST-PENDING	ri|9430008B02|PX00108M17|AK020408|1135					AK020408	Sast-pending		ILMN_1242293	000730187	S	881	AGGATCAGTTGGAACTTGGGGGTGAGGTGTTCAGGAGGTCAGCACCATGG										
Mus musculus	RefSeq	ILMN_232025	ILMN_232025	SALL4	NM_201395.2	NM_201395.2		99377	117553622	NM_201395.2	Sall4	NP_958797.2	ILMN_3124235	002320315	A	3599	CCTGTTTACACTGTGAAGTGGGTATCTTACGGAGAACACACCAGCCTTGG	2	-	168573924-168573973	2qH3	Mus musculus sal-like 4 (Drosophila) (Sall4), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C330011P20Rik; AW536104; Tex20; AA407717; C78563; AL022809; 5730441M18Rik; C78083	C330011P20Rik; AW536104; Tex20; AA407717; C78563; AL022809; 5730441M18Rik; C78083
Mus musculus	RefSeq	ILMN_219446	ILMN_219446	SLC38A4	NM_027052.3	NM_027052.3		69354	142365242	NM_027052.3	Slc38a4	NP_081328.2	ILMN_1215803	005340386	S	1927	GGGAATGGTTTTGTTGGGAATGGTGAAGGATGCATTAAAAATTCTGTGGC	15	-	96827209-96827258	15qF1	Mus musculus solute carrier family 38, member 4 (Slc38a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	1110012E16Rik; Ata3; 1700012A18Rik; mATA3	1110012E16Rik; Ata3; 1700012A18Rik; mATA3
Mus musculus	RefSeq	ILMN_220132	ILMN_327567	LOC100040968	XM_001476235.1	XM_001476235.1		100040968	149264695	XM_001476235.1	LOC100040968	XP_001476285.1	ILMN_1246700	002370368	S	2031	GGGCTCAGGCATAAGAGTTGGGTAGACTGTGGAGGTTTAGTCTAGGTTGA	13	+	110124891-110124940	13qD2.1	PREDICTED: Mus musculus similar to CG33003-PA (LOC100040968), mRNA.					
Mus musculus	RefSeq	ILMN_211989	ILMN_211989	DACH2	NM_033605.2	NM_033605.2		93837	71043937	NM_033605.2	Dach2	NP_291083.1	ILMN_1244645	001260035	S	1700	TCCAGGAGAAGCAGATTCAGCAGGAAAAGAAGGAACTGCGAATAGAGCTC	X	+	110928760-110928809	XqE1	Mus musculus dachshund 2 (Drosophila) (Dach2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191477	ILMN_191477	V2R16	NM_009491.2	NM_009491.2		22307	115529455	NM_009491.2	V2r16	NP_033517.2	ILMN_2479412	001170440	S	3540	TAAAAACAAGATGGAACTCCAAAATCATTTTCTAAGGAAATAAATGAAAA	5	-	109422738-109422787	5qF	Mus musculus vomeronasal 2, receptor, 16 (V2r16), mRNA.				VR16	VR16
Mus musculus	RefSeq	ILMN_189744	ILMN_220776	UBXN8	NM_178648.2	NM_178648.2		108159	85861246	NM_178648.2	Ubxn8	NP_848763.2	ILMN_1245121	006620041	S	197	CCGTGACCACCTCCTGGTTTAACTCACTGAAACCTTCGCAAGGTCATCTG	8	-	34748955-34749004	8qA4	Mus musculus UBX domain protein 8 (Ubxn8), mRNA.				Rep-8; D0H8S2298E; Rep8h	Rep-8; D0H8S2298E; Rep8h
Mus musculus	RefSeq	ILMN_215509	ILMN_215509	OSBPL1A	NM_207530.2	NM_207530.2		64291	52345395	NM_207530.2	Osbpl1a	NP_997413.2	ILMN_2711676	004830221	S	635	TGTGCCGCCTACCGGGCCCACAAGCAGTGTGTCCTAAAGCTCCTGAGAAG	18	-	13068398-13068447	18qA1	Mus musculus oxysterol binding protein-like 1A (Osbpl1a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Osbpl1b; G430090F17Rik; Gm753	Osbpl1b; G430090F17Rik; Gm753
Mus musculus	RefSeq	ILMN_206032	ILMN_215509	OSBPL1A	NM_207530.2	NM_207530.2		64291	52345395	NM_207530.2	Osbpl1a	NP_997413.2	ILMN_2577039	004590068	S	1549	GGGGTCGCTGACTTGCCTGGAAGCTGTGACAGCACACTCCTTTGAAGAGA	18	-	12978107-12978156	18qA1	Mus musculus oxysterol binding protein-like 1A (Osbpl1a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Osbpl1b; G430090F17Rik; Gm753	Osbpl1b; G430090F17Rik; Gm753
Mus musculus	RefSeq	ILMN_198309	ILMN_215509	OSBPL1A	NM_207530.2	NM_207530.2		64291	52345395	NM_207530.2	Osbpl1a	NP_997413.2	ILMN_2531225	001990056	S	1155	CGGCCATGGACTTGAAGGAGTCGTTAGCGAGAGCACAAACATGTCAACAG	18	-	13040765-13040786:13050676-13050703	18qA1	Mus musculus oxysterol binding protein-like 1A (Osbpl1a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Osbpl1b; G430090F17Rik; Gm753	Osbpl1b; G430090F17Rik; Gm753
Mus musculus	Riken	ILMN_205465	ILMN_205465	A630042L21RIK	ri|A630042L21|PX00146E19|AK041866|3410					AK041866	A630042L21Rik		ILMN_1228315	003130603	S	3153	CCCAGGTCTCTTGCTGGTTTGGAGAATCAATAGGCAAGCAGGTCCCCGTG										
Mus musculus	RefSeq	ILMN_195581	ILMN_226128	SATB2	NM_139146.2	NM_139146.2		212712	145046228	NM_139146.2	Satb2	NP_631885.1	ILMN_1225562	003830626	S	5219	AACTTATGTGCATTGTTAGGCTGTTAGAATTTTTTGGTTGTTAAATAAAA	1	-	56850842-56850891	1qC1.3	Mus musculus special AT-rich sequence binding protein 2 (Satb2), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IGI]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA1034	mKIAA1034
Mus musculus	RefSeq	ILMN_195581	ILMN_226128	SATB2	NM_139146.2	NM_139146.2		212712	145046228	NM_139146.2	Satb2	NP_631885.1	ILMN_2594550	005080154	S	2763	CCAACTTATGGAAGCGATACCAGGCAAATTCCAGGATGGGAAGACCCACG	1	-	56853298-56853347	1qC1.3	Mus musculus special AT-rich sequence binding protein 2 (Satb2), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IGI]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA1034	mKIAA1034
Mus musculus	MEEBO	ILMN_184933	ILMN_184933	NCOA4	scl027057.9_28				9790194	NM_019744	Ncoa4		ILMN_2695008	007610307	S	36	GTGAGCAGAATGAACACATCCCTGGAACAGAGTGGCTGCTACAGTAATAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_196146	ILMN_196146	ZFP523	NM_172617.1	NM_172617.1		224656	27369881	NM_172617.1	Zfp523	NP_766205.1	ILMN_2998395	006770044	S	2650	TTCCTGCTCTGGGTGTGGTGGCAAACGGGCGGATGAGTATTTAATAAAAG	17	+	27933413-27933462	17qA3.3	Mus musculus zinc finger protein 523 (Zfp523), mRNA.				2810027J07; MGC66570; MGC79196; BC025615	2810027J07; MGC66570; MGC79196; BC025615
Mus musculus	RefSeq	ILMN_240877	ILMN_240877	OLFR294	NM_001011750.1	NM_001011750.1		257904	58801287	NM_001011750.1	Olfr294	NP_001011750.1	ILMN_2837200	005810673	S	878	CTGATGTCAAGTGTGCTTTGAGGAGTTTGCAAAAAATTCTCTGCCCAAGG	7	-	93764226-93764275	7qD3	Mus musculus olfactory receptor 294 (Olfr294), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR219-5	MOR219-5
Mus musculus	RefSeq	ILMN_241806	ILMN_241806	I830077J02RIK	NM_001033780.2	NM_001033780.2		433638	142359484	NM_001033780.2	I830077J02Rik	NP_001028952.1	ILMN_3161500	000430465	S	605	CCTGGGACCACACTCTATGTAAAGCTGTAGTTGGGGTGGTTTAGGCTTGA	3	-	105729222-105729271	3qF2.2	Mus musculus RIKEN cDNA I830077J02 gene (I830077J02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_224235	ILMN_245954	OLFR74	NM_054091.2	NM_054091.2		117005	112821674	NM_054091.2	Olfr74	NP_473432.2	ILMN_2777069	006860553	S	625	GTCAGCACATTACTCCTTATTCTGCTGTCTTACCTGTTCATTGTTGTCAC	2	-	87814146-87814195	2qD	Mus musculus olfactory receptor 74 (Olfr74), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IDA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with an odorant, any substance capable of stimulating the sense of smell [goid 5549] [evidence IDA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IDA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR174-4; mOR-EV	MOR174-4; mOR-EV
Mus musculus	RefSeq	ILMN_208752	ILMN_208752	PRSS23	NM_029614.3	NM_029614.3		76453	114326505	NM_029614.3	Prss23	NP_083890.2	ILMN_1246127	003830670	S	3123	GCGAGGAGACAAGCAACATGAGGTCGATGTTTGAGGGGTTGCATGCTGGG	7	-	96656348-96656397	7qE1	Mus musculus protease, serine, 23 (Prss23), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Spuve; AI790574; 4930479H08Rik; 2310046G15Rik	Spuve; AI790574; 4930479H08Rik; 2310046G15Rik
Mus musculus	RefSeq	ILMN_193869	ILMN_208752	PRSS23	NM_029614.3	NM_029614.3		76453	114326505	NM_029614.3	Prss23	NP_083890.2	ILMN_1233257	002370300	S	970	CCCTGGGAGCTGCTTCGCTGGAGGACTCACACCAATCTTCATGAACTGTC	7	-	96658501-96658550	7qE1	Mus musculus protease, serine, 23 (Prss23), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Spuve; AI790574; 4930479H08Rik; 2310046G15Rik	Spuve; AI790574; 4930479H08Rik; 2310046G15Rik
Mus musculus	RefSeq	ILMN_202365	ILMN_208752	PRSS23	NM_029614.3	NM_029614.3		76453	114326505	NM_029614.3	Prss23	NP_083890.2	ILMN_1212708	004880300	S	213	CTCACCTGCATGAACACACAGAGCAGGACAAGAAGGATGAAGAGCCCCGG	7	-	96659258-96659307	7qE1	Mus musculus protease, serine, 23 (Prss23), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Spuve; AI790574; 4930479H08Rik; 2310046G15Rik	Spuve; AI790574; 4930479H08Rik; 2310046G15Rik
Mus musculus	RefSeq	ILMN_205367	ILMN_250970	PLXNA4	XM_984176.1	XM_984176.1		243743	94377136	XM_984176.1	Plxna4	XP_989270.1	ILMN_1230945	000610465	S	990	GTTTGCAGAGGTCACTGTCCTTTTGGTGTCCCACATGCCGAAGCTGAGCC				6qA3.3	PREDICTED: Mus musculus plexin A4, transcript variant 3 (Plxna4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 17154] [evidence IGI]		
Mus musculus	RefSeq	ILMN_216632	ILMN_216632	PAX9	NM_011041.2	NM_011041.2		18511	86262162	NM_011041.2	Pax9	NP_035171.1	ILMN_1248859	000130593	S	2016	TTTCTCTGTTTGGTGGTGGGCCACTTGGGCTCCTGGACCTGGACTTGCCC	12	+	57811659-57811708	12qC1	Mus musculus paired box gene 9 (Pax9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	Pax-9	Pax-9
Mus musculus	RefSeq	ILMN_215715	ILMN_215715	MPDZ	NM_010820.2	NM_010820.2		17475	124053456	NM_010820.2	Mpdz	NP_034950.2	ILMN_1234151	003440608	S	3939	TTGCCTTCCTTGCCGCACAGCCTTTACCCTAAGTACAGCTTCAGCAGCAC	4	-	80959443-80959492	4qC3	Mus musculus multiple PDZ domain protein (Mpdz), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B930003D11Rik; MUPP1; AI225843	B930003D11Rik; MUPP1; AI225843
Mus musculus	RefSeq	ILMN_215715	ILMN_215715	MPDZ	NM_010820.2	NM_010820.2		17475	124053456	NM_010820.2	Mpdz	NP_034950.2	ILMN_2662776	007560703	S	6342	GCCATCCTCAAGAGGACAAAGGGCACCGTCACCCTCATGGTTCTCTCTTG	4	-	80925527-80925576	4qC3	Mus musculus multiple PDZ domain protein (Mpdz), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B930003D11Rik; MUPP1; AI225843	B930003D11Rik; MUPP1; AI225843
Mus musculus	RefSeq	ILMN_215715	ILMN_215715	MPDZ	NM_010820.2	NM_010820.2		17475	124053456	NM_010820.2	Mpdz	NP_034950.2	ILMN_2682190	004480041	S	5828	CCCGCTCGGAGATGTCCCTATATTTATTGCGATGATGCACCCAAATGGTG	4	-	80930506-80930555	4qC3	Mus musculus multiple PDZ domain protein (Mpdz), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B930003D11Rik; MUPP1; AI225843	B930003D11Rik; MUPP1; AI225843
Mus musculus	RefSeq	ILMN_209270	ILMN_209270	GATAD1	NM_026033.1	NM_026033.1		67210	23956153	NM_026033.1	Gatad1	NP_080309.1	ILMN_2594205	003290458	S	564	CGGCCCGGCTCAGAAATACCAAATACAAATCGGCTCCAGCTGCTGAAAAG	5	-	3646834-3646883	5qA1	Mus musculus GATA zinc finger domain containing 1 (Gatad1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	2810047M21Rik; 8430439A17Rik; Odag; B330017N08Rik; 2310031E19Rik	2810047M21Rik; 8430439A17Rik; Odag; B330017N08Rik; 2310031E19Rik
Mus musculus	RefSeq	ILMN_209270	ILMN_209270	GATAD1	NM_026033.1	NM_026033.1		67210	23956153	NM_026033.1	Gatad1	NP_080309.1	ILMN_2982097	006370279	S	2077	CATCAGCTGCTTCAGCCAGATCTTTGATCTGCATGCAGCATCCCCTCCTC	5	-	3640362-3640411	5qA1	Mus musculus GATA zinc finger domain containing 1 (Gatad1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	2810047M21Rik; 8430439A17Rik; Odag; B330017N08Rik; 2310031E19Rik	2810047M21Rik; 8430439A17Rik; Odag; B330017N08Rik; 2310031E19Rik
Mus musculus	RefSeq	ILMN_209270	ILMN_209270	GATAD1	NM_026033.1	NM_026033.1		67210	23956153	NM_026033.1	Gatad1	NP_080309.1	ILMN_1259903	006200379	S	1531	CCCAGGCAAAGTGGCAGATTCCAGGGAAATCATTATAAACATGTAGTGTC	5	-	3640908-3640957	5qA1	Mus musculus GATA zinc finger domain containing 1 (Gatad1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	2810047M21Rik; 8430439A17Rik; Odag; B330017N08Rik; 2310031E19Rik	2810047M21Rik; 8430439A17Rik; Odag; B330017N08Rik; 2310031E19Rik
Mus musculus	MEEBO	ILMN_210522	ILMN_210522	4931412M21	scl43390.14.1_51				51766803	XM_488623	4931412M21		ILMN_2606455	003190243	S	2116	GCACATGGCATATCATCCCTCTGTCCAGGGAAGTCTTTGTCCTTGATGGA										
Mus musculus	MEEBO	ILMN_223361	ILMN_223361	FNDC5	scl0384061.7_167				47087147	NM_027402	Fndc5		ILMN_2763060	004490692	S	2486	CGGGTAGCACAGGAGAGGAGGGACGGATAAGGGCAGATGTCAGCAATACT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210280	ILMN_210280	KLF2	NM_008452.1	NM_008452.1		16598	6680579	NM_008452.1	Klf2	NP_032478.1	ILMN_2604029	002970332	S	1168	GGTCCCCTTGCAAACAGACTGCTATTTATTGGACCTTAGGACAGAGCCGG	8	+	74844876-74844925	8qB3.3	Mus musculus Kruppel-like factor 2 (lung) (Klf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	Lklf	Lklf
Mus musculus	Riken	ILMN_205368	ILMN_205368	D130002C14RIK	ri|D130002C14|PX00182J03|AK051127|1121					AK051127	D130002C14Rik		ILMN_1258250	000780414	S	1042	GGACTCTTAGTGTAGGCAGAGCAGGTGACTGGGAAACGCACTGGGAACAC										
Mus musculus	RefSeq	ILMN_214141	ILMN_214141	HMGN3	NM_175074.1	NM_175074.1		94353	41281865	NM_175074.1	Hmgn3	NP_778249.1	ILMN_1247704	000670133	S	673	GCGCCCTTGCTTTACAATTTTAGTCCTGTGCAGACTGTGGTGTTTTTACT	9	-	83003693-83003742	9qE2	Mus musculus high mobility group nucleosomal binding domain 3 (Hmgn3), transcript variant 2, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence ISS]	HMGN3b; TRIP7; 1110002A15Rik; HMGN3a; BB071015; 6330514M13Rik	HMGN3b; TRIP7; 1110002A15Rik; HMGN3a; BB071015; 6330514M13Rik
Mus musculus	RefSeq	ILMN_210129	ILMN_210129	SHC4	NM_199022.2	NM_199022.2		271849	84579887	NM_199022.2	Shc4	NP_950187.1	ILMN_1225841	000870441	S	2484	TCCAGAAGGCAAGGTGAGGACCAAGGACCATGTGTTTGATAATGTTGGCC	2	-	125455469-125455506:125465000-125465011	2qF1	Mus musculus SHC (Src homology 2 domain containing) family, member 4 (Shc4), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with a receptor that possesses protein tyrosine kinase activity [goid 30971] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9930029B02Rik; Gm685; RaLP; 6230417E10Rik; RP23-323D9.1	9930029B02Rik; Gm685; RaLP; 6230417E10Rik; RP23-323D9.1
Mus musculus	RefSeq	ILMN_210129	ILMN_210129	SHC4	NM_199022.2	NM_199022.2		271849	84579887	NM_199022.2	Shc4	NP_950187.1	ILMN_2762185	005960253	S	2434	GTACTGAGTGGACTGCAAGGTGGCCAGGCCAAGCATCTTCTCTTGGTGGA	2	-	125465012-125465061	2qF1	Mus musculus SHC (Src homology 2 domain containing) family, member 4 (Shc4), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with a receptor that possesses protein tyrosine kinase activity [goid 30971] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9930029B02Rik; Gm685; RaLP; 6230417E10Rik; RP23-323D9.1	9930029B02Rik; Gm685; RaLP; 6230417E10Rik; RP23-323D9.1
Mus musculus	RefSeq	ILMN_212365	ILMN_212365	LIPK	NM_172837.1	NM_172837.1		240633	27370257	NM_172837.1	Lipk	NP_766425.1	ILMN_2964420	007100575	S	1597	ATGAGGAAGTTCACATAGCAAGTGACAGTGGATGGTTTCTCAGAGCTGAG	19	+	34113308-34113357	19qC1	Mus musculus lipase, family member K (Lipk), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC67675; Lipl2; 9930115F20; BC055815	MGC67675; Lipl2; 9930115F20; BC055815
Mus musculus	RefSeq	ILMN_213847	ILMN_213847	CPNE1	NM_170590.1	NM_170590.1		266692	25141331	NM_170590.1	Cpne1	NP_733469.1	ILMN_1223998	006650482	S	3346	GTATTTTTCCCTCATCTGTTACTGTTTCATGTTTTTATATTCCATATGTA	2	-	155897651-155897700	2qH1	Mus musculus copine I (Cpne1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 1786] [evidence ISO]	KIAA4108; 1810028N16Rik; mKIAA4108	KIAA4108; 1810028N16Rik; mKIAA4108
Mus musculus	RefSeq	ILMN_215219	ILMN_235418	LOC669251	XR_002451.1	XR_002451.1		669251	94403243	XR_002451.1	LOC669251		ILMN_2689877	003140709	S	3298	TTCTATTATTTTCTACTTCAGCTCTATTTTACTTGAAGTAACACAAGAAA					PREDICTED: Mus musculus similar to CD2-associated protein (Mesenchym-to-epithelium transition protein with SH3 domains 1) (METS-1) (LOC669251), mRNA.					
Mus musculus	RefSeq	ILMN_215219	ILMN_235418	LOC669251	XR_002451.1	XR_002451.1		669251	94403243	XR_002451.1	LOC669251		ILMN_2716558	006960450	S	5397	CGTGGATAGCGGGATGCTAAGTATGTAGTTAACGGTCCCTTCACCTCCAC					PREDICTED: Mus musculus similar to CD2-associated protein (Mesenchym-to-epithelium transition protein with SH3 domains 1) (METS-1) (LOC669251), mRNA.					
Mus musculus	Riken	ILMN_206986	ILMN_206986	FRK	ri|5031433M02|PX00642L03|AK077264|2039					AK077264	Frk		ILMN_1223123	001570181	S	1733	GCTGCTAGGTGTGGTACTAAAGACTTAGGATCCCAACACACAAGAGGGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221277	ILMN_221277	ENDOD1	NM_028013.2	NM_028013.2		71946	141803205	NM_028013.2	Endod1	NP_082289.1	ILMN_2733356	006290133	S	4150	ACTATGTACAGTGCTGTGCACCTTGCAGATGCTCAATAAAGTCGCTGCTG	9	-	14158454-14158503	9qA1	Mus musculus endonuclease domain containing 1 (Endod1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2210414F18Rik; 2310067E08Rik; C85344	2210414F18Rik; 2310067E08Rik; C85344
Mus musculus	RefSeq	ILMN_208929	ILMN_208929	SLC25A13	NM_015829.2	NM_015829.2		50799	118131091	NM_015829.2	Slc25a13	NP_056644.1	ILMN_2590896	001300408	S	2221	CCACATCTGTCCCATTTAAATTCAGGTCAATGCTTCCTATATTAAATGCA	6	-	5992014-5992063	6qA1	Mus musculus solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 (Slc25a13), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of transferring reducing equivalents from the cytosol into the mitochondria; NADH is used to synthesise malate in the cytosol; this compound is then transported into the mitochondria where it is converted to oxaloacetate using NADH, the oxaloacetate reacts with gluamate to form aspartate, and the aspartate then returns to the cytosol to complete the cycle [goid 43490] [evidence IMP]; The directed movement of aspartate, the anion of aspartic acid, into, out of, within or between cells [goid 15810] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid [goid 5313] [evidence IMP]	AI785475; Ctrn	AI785475; Ctrn
Mus musculus	RefSeq	ILMN_208929	ILMN_208929	SLC25A13	NM_015829.2	NM_015829.2		50799	118131091	NM_015829.2	Slc25a13	NP_056644.1	ILMN_1236546	004060139	S	217	CCTCATGACTTTGTCACTCGGTATTTGAATATTTTTGGAGAAAGCCAGCC	6	-	6131024-6131073	6qA1	Mus musculus solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 (Slc25a13), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of transferring reducing equivalents from the cytosol into the mitochondria; NADH is used to synthesise malate in the cytosol; this compound is then transported into the mitochondria where it is converted to oxaloacetate using NADH, the oxaloacetate reacts with gluamate to form aspartate, and the aspartate then returns to the cytosol to complete the cycle [goid 43490] [evidence IMP]; The directed movement of aspartate, the anion of aspartic acid, into, out of, within or between cells [goid 15810] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid [goid 5313] [evidence IMP]	AI785475; Ctrn	AI785475; Ctrn
Mus musculus	MEEBO	ILMN_191178	ILMN_191178	MJ-1000-76_241	MJ-1000-76_241						MJ-1000-76_241		ILMN_2476831	006480162	S	15	GCATGCGGCTAAGGTTATGATGGCCGCCCAGACAAATATGAGTGGAGGAC										
Mus musculus	Riken	ILMN_207389	ILMN_207389	C530025M17RIK	ri|C530025M17|PX00669M17|AK082968|3008					AK082968	C530025M17Rik		ILMN_1249209	000240397	S	2950	GCTCAGAGGGAGAGCACTGGCCTAGCATTTTTAAGGCCCTGGGTTCAATC										
Mus musculus	RefSeq	ILMN_209766	ILMN_259580	CLIC4	NM_013885.2	NM_013885.2		29876	118130925	NM_013885.2	Clic4	NP_038913.1	ILMN_1230546	003400491	S	3324	CCACCTTGGAGCCGGGATTTTGAGTGGAGTCTGCCTATTTTCCAGTGGAT	4	-	134770575-134770624	4qD3	Mus musculus chloride intracellular channel 4 (mitochondrial) (Clic4), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence ISO]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence ISO]	TU-74; mc3s5; D0Jmb3; mtCLIC	TU-74; mc3s5; D0Jmb3; mtCLIC
Mus musculus	RefSeq	ILMN_209766	ILMN_259580	CLIC4	NM_013885.2	NM_013885.2		29876	118130925	NM_013885.2	Clic4	NP_038913.1	ILMN_2761109	007040619	S	3976	TGCTTGCGTTTTCTTTTCTCTGGAACATCAACACCAGTGTATTGCTGGCA	4	-	134769923-134769972	4qD3	Mus musculus chloride intracellular channel 4 (mitochondrial) (Clic4), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence ISO]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence ISO]	TU-74; mc3s5; D0Jmb3; mtCLIC	TU-74; mc3s5; D0Jmb3; mtCLIC
Mus musculus	RefSeq	ILMN_209766	ILMN_259580	CLIC4	NM_013885.2	NM_013885.2		29876	118130925	NM_013885.2	Clic4	NP_038913.1	ILMN_2599018	002000719	S	1375	TGTAAGGAGTCTGGAAGGATTACTACTGTGTCAGACGTGCTGTTTCAGAG	4	-	134772524-134772573	4qD3	Mus musculus chloride intracellular channel 4 (mitochondrial) (Clic4), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence ISO]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence ISO]	TU-74; mc3s5; D0Jmb3; mtCLIC	TU-74; mc3s5; D0Jmb3; mtCLIC
Mus musculus	RefSeq	ILMN_187380	ILMN_243658	2900026A02RIK	NM_172884.2	NM_172884.2		243219	142373023	NM_172884.2	2900026A02Rik	NP_766472.1	ILMN_1251935	002710471	S	2673	TGAGGTGTTCAGCAGCAAGGAGACGGCAGGCCCCACCTGTACCCCACCTT	5	-	113518436-113518485	5qF	Mus musculus RIKEN cDNA 2900026A02 gene (2900026A02Rik), mRNA.				mKIAA1671; AW539426; 8430408O14Rik; KIAA1671; A530094D01	mKIAA1671; AW539426; 8430408O14Rik; KIAA1671; A530094D01
Mus musculus	RefSeq	ILMN_240422	ILMN_240422	IFNZ	NM_197889.1	NM_197889.1		319146	37497121	NM_197889.1	Ifnz	NP_922871.1	ILMN_3093840	004040541	A	658	TGCTGCCTGTGCATCTATTCCTGGTGGGAGGGGTGATGCTGAGCTGCAGC	4	+	88254019-88254068	4qC4	Mus musculus interferon zeta (Ifnz), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interferon-alpha/beta receptor [goid 5132] [evidence IDA]	6030405N23Rik; Lmtn; BGIF	6030405N23Rik; Lmtn; BGIF
Mus musculus	RefSeq	ILMN_240422	ILMN_240422	IFNZ	NM_197889.1	NM_197889.1		319146	37497121	NM_197889.1	Ifnz	NP_922871.1	ILMN_3021483	006770551	I	133	AGAGAGCTGGAAGGGTCTGGCGGGCCACCCAAACGCACCAAGATGCGAAA	4	+	88253494-88253543	4qC4	Mus musculus interferon zeta (Ifnz), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interferon-alpha/beta receptor [goid 5132] [evidence IDA]	6030405N23Rik; Lmtn; BGIF	6030405N23Rik; Lmtn; BGIF
Mus musculus	RefSeq	ILMN_246999	ILMN_246999	GBP10	NM_001039646.2	NM_001039646.2		626578	116812913	NM_001039646.2	Gbp10	NP_001034735.2	ILMN_2808485	001500246	S	3135	ATATAAGAGAATACATGGGGCACATGGGAGGTGGAGAGCTCAGAGATGGC	5	-	105645061-105645110	5qE5	Mus musculus guanylate-binding protein 10 (Gbp10), mRNA. XM_987647 XM_987685 XM_987723 XM_987759 XM_987793 XM_987820				MGC118098; MGC117865	MGC118098; MGC117865
Mus musculus	RefSeq	ILMN_225536	ILMN_225536	4930428D18RIK	NM_001033799.1	NM_001033799.1		619294	85702128	NM_001033799.1	4930428D18Rik	NP_001028971.1	ILMN_2811775	000770520	S	588	GCCCTTTGGAATGTGTGTCAGGGGAGAGTACATAGAAAGGCCACTTACAA	X	+	72650183-72650232	XqA7.3	Mus musculus RIKEN cDNA 4930428D18 gene (4930428D18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220577	ILMN_220577	SSBP3	NM_023672.2	NM_023672.2		72475	38372896	NM_023672.2	Ssbp3	NP_076161.2	ILMN_1219475	005420731	S	782	ACGCACAGCCTCCACCTCACAATCCCAGCAGCATGATGGGACCCCACAGT	4	+	106699850-106699899	4qC7	Mus musculus single-stranded DNA binding protein 3 (Ssbp3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence ISA]	2610021L12Rik; 5730488C10Rik; AI854733; LAST; SSDP1; 2610200M23Rik; AW551939	2610021L12Rik; 5730488C10Rik; AI854733; LAST; SSDP1; 2610200M23Rik; AW551939
Mus musculus	RefSeq	ILMN_213161	ILMN_220577	SSBP3	NM_023672.2	NM_023672.2		72475	38372896	NM_023672.2	Ssbp3	NP_076161.2	ILMN_2634283	001820546	S	2895	CCGGAAGACACTGAGTTCATTGTACATGTACACCCTCTGCGCCCTGCCCA	4	+	106721999-106722048	4qC7	Mus musculus single-stranded DNA binding protein 3 (Ssbp3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence ISA]	2610021L12Rik; 5730488C10Rik; AI854733; LAST; SSDP1; 2610200M23Rik; AW551939	2610021L12Rik; 5730488C10Rik; AI854733; LAST; SSDP1; 2610200M23Rik; AW551939
Mus musculus	RefSeq	ILMN_213161	ILMN_220577	SSBP3	NM_023672.2	NM_023672.2		72475	38372896	NM_023672.2	Ssbp3	NP_076161.2	ILMN_2666108	001340349	S	1769	TCAAGTCAACGGCCAGAAAACTCTCACCTTCTTCCCGCCCAAAAGGACCT	4	+	106720873-106720922	4qC7	Mus musculus single-stranded DNA binding protein 3 (Ssbp3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence ISA]	2610021L12Rik; 5730488C10Rik; AI854733; LAST; SSDP1; 2610200M23Rik; AW551939	2610021L12Rik; 5730488C10Rik; AI854733; LAST; SSDP1; 2610200M23Rik; AW551939
Mus musculus	RefSeq	ILMN_214526	ILMN_214526	PCDHB8	NM_053133.1	NM_053133.1		93879	16716432	NM_053133.1	Pcdhb8	NP_444363.1	ILMN_2648921	002260414	S	2208	GTGGATGTCAGTGGTGCGGGGACCTTATCCCAGAGTTACCATTATGAGGT	18	+	37517132-37517181	18qB3	Mus musculus protocadherin beta 8 (Pcdhb8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbH; Pcdhb5C	PcdhbH; Pcdhb5C
Mus musculus	RefSeq	ILMN_220187	ILMN_220187	ELAVL3	NM_010487.1	NM_010487.1		15571	34328052	NM_010487.1	Elavl3	NP_034617.1	ILMN_2718837	003290746	S	1871	ACCCTGCATGGGATGGCTTAGGGGACACAATGGTGCCCTACTCAGGCCTC	9	-	21822542-21822591	9qA3	Mus musculus ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) (Elavl3), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	PLE21; mHuC; Huc	PLE21; mHuC; Huc
Mus musculus	RefSeq	ILMN_192701	ILMN_217310	4632433K11RIK	NM_029849.2	NM_029849.2		77043	142379355	NM_029849.2	4632433K11Rik	NP_084125.1	ILMN_2490499	003170372	S	526	GGTGATGTAGGAGGTTGGTGTACTTACTCAGAAGGGTCCCTAATTTTCTC	7	+	4986205-4986254	7qA1	Mus musculus RIKEN cDNA 4632433K11 gene (4632433K11Rik), mRNA.				AW049395	AW049395
Mus musculus	RefSeq	ILMN_217310	ILMN_217310	4632433K11RIK	NM_029849.2	NM_029849.2		77043	142379355	NM_029849.2	4632433K11Rik	NP_084125.1	ILMN_2681733	007400091	S	2301	CTCTGGGGGCTCAGGGACCGATGTGGTATCTGTGACTTTTACCACCTGGA	7	+	4987980-4988029	7qA1	Mus musculus RIKEN cDNA 4632433K11 gene (4632433K11Rik), mRNA.				AW049395	AW049395
Mus musculus	MEEBO	ILMN_188615	ILMN_188615	TNFRSF22	scl0319679.1_12				34328313	NM_023680	Tnfrsf22		ILMN_2522818	006960128	S	19	AGTGGTGTGGTCGACTATGTGGTCAACTATGTGGTCCCTATGATGGACTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]	Interacting selectively with TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines [goid 45569] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]		
Mus musculus	MEEBO	ILMN_188615	ILMN_188615	TNFRSF22	scl0319679.1_12				34328313	NM_023680	Tnfrsf22		ILMN_2454204	000430301	S	11	CTCAGTAAATTTCCACTTGCCTAGGAGTGTGGTCAGTGCCTTGCTCTCCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]	Interacting selectively with TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines [goid 45569] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223123	ILMN_255735	ARL13A	XM_904411.2	XM_904411.2		74448	94408160	XM_904411.2	Arl13a	XP_909504.1	ILMN_1230103	002260678	S	1617	CGGATAGACTGTCACACGCAACTGCAACTGAGCCTTAGACCAACAGGGTT				XqE3	PREDICTED: Mus musculus ADP-ribosylation factor-like 13A, transcript variant 2 (Arl13a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212993	ILMN_212993	CST9	NM_009979.1	NM_009979.1		13013	6753545	NM_009979.1	Cst9	NP_034109.1	ILMN_1239816	005890347	S	540	ACCCTTGGCAGAACCTCTGTGCTCATTTTCCTTGTTTTGCAGCATTGTGC	2	+	148664327-148664376	2qG3	Mus musculus cystatin 9 (Cst9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	cresp; testatin; M12	cresp; testatin; M12
Mus musculus	RefSeq	ILMN_184353	ILMN_184353	ZFP161	NM_009547.2	NM_009547.2		22666	31544059	NM_009547.2	Zfp161	NP_033573.1	ILMN_2417945	006660537	S	3114	GATGTGTACAGTTGTAGAAGGTGCCAACTTTAAAAGCTCATGTTTGGTTC	17	+	69739433-69739482	17qE1.3	Mus musculus zinc finger protein 161 (Zfp161), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ZF5	ZF5
Mus musculus	RefSeq	ILMN_184353	ILMN_184353	ZFP161	NM_009547.2	NM_009547.2		22666	31544059	NM_009547.2	Zfp161	NP_033573.1	ILMN_1236417	004610672	S	165	AAGTTGTGCGGTCGCAACAGGGAAGTGGTGTGGCCGCCATTGTCGCAGCT	17	+	69733482-69733531	17qE1.3	Mus musculus zinc finger protein 161 (Zfp161), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ZF5	ZF5
Mus musculus	RefSeq	ILMN_184353	ILMN_184353	ZFP161	NM_009547.2	NM_009547.2		22666	31544059	NM_009547.2	Zfp161	NP_033573.1	ILMN_2854858	005130592	S	3398	AGGCAATCCCATCAGTTCGTCTGTGCAGTTAGTAGGAGGGGCCGGACTGG	17	+	69739717-69739766	17qE1.3	Mus musculus zinc finger protein 161 (Zfp161), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ZF5	ZF5
Mus musculus	RefSeq	ILMN_215222	ILMN_215222	PKD1	NM_013630.2	NM_013630.2		18763	124487379	NM_013630.2	Pkd1	NP_038658.2	ILMN_2827036	000520176	S	13532	GGCTGCGCCCAGCTCTACCCCTAGGTGGCCATCTCCTCTTGCTAAAAATC	17	+	24732821-24732870	17qA3.3	Mus musculus polycystic kidney disease 1 homolog (Pkd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IPI]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The series of events by which a mechanical stimulus is received by a cell and converted into a molecular signal [goid 50982] [evidence IMP]; The series of events by which a mechanical stimulus is received by a cell and converted into a molecular signal [goid 50982] [evidence IDA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IPI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence TAS]	FLJ00285; PC1; MGC118471; mFLJ00285	FLJ00285; PC1; MGC118471; mFLJ00285
Mus musculus	Riken	ILMN_205032	ILMN_205032	A430079P20RIK	ri|A430079P20|PX00138I01|AK040234|2022					AK040234	A430079P20Rik		ILMN_1218209	003850541	S	1907	AAGGGCTAGAGGAAGCCAAAGAAATGCCACCCTGCTCAATCTGAGGGAGG										
Mus musculus	RefSeq	ILMN_210733	ILMN_210733	D10WSU52E	NM_145422.3	NM_145422.3		28088	146149135	NM_145422.3	D10Wsu52e	NP_663397.1	ILMN_2608613	005570296	S	1651	AAGACATGAGACTCAAGGCCTGACAAGATCCGAATTGCAGAGCTGTTGCT				10qC1	Mus musculus DNA segment, Chr 10, Wayne State University 52, expressed (D10Wsu52e), mRNA.				AI463255; AI255213	AI463255; AI255213
Mus musculus	RefSeq	ILMN_222893	ILMN_228177	SMARCAD1	NM_007958.1	NM_007958.1		13990	62543564	NM_007958.1	Smarcad1	NP_031984.1	ILMN_1251870	001230379	S	4872	CTCCTTGTGATCACAGTACCCAGGTCGCTTAGTCAAGTTGTTGGAAATTG	6	+	65065817-65065866	6qC1	Mus musculus SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 (Smarcad1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA recombination, a process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents [goid 18] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	D6Pas1; mKIAA1122; AW226546; AV081750; Etl1	D6Pas1; mKIAA1122; AW226546; AV081750; Etl1
Mus musculus	RefSeq	ILMN_219624	ILMN_219624	PMF1	NM_025928.3	NM_025928.3		67037	146149281	NM_025928.3	Pmf1	NP_080204.1	ILMN_2711410	003520162	S	641	TAGAGCGCCTGTGGAGGCAGTTTCCAGGCAGTAATGGAGTCCCCACCACC				3qF1	Mus musculus polyamine-modulated factor 1 (Pmf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW060657; AL033286; 2600009M07Rik	AW060657; AL033286; 2600009M07Rik
Mus musculus	RefSeq	ILMN_185347	ILMN_259411	SOAT1	NM_009230.3	NM_009230.3		20652	112363102	NM_009230.3	Soat1	NP_033256.2	ILMN_1248510	007570253	S	3016	GCTCCAGAAGCTGGCTTCTGAAACATCTGCTCAGTCATTATACTTTATAT	1	-	158359958-158360007	1qG3	Mus musculus sterol O-acyltransferase 1 (Soat1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence ISO]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + a sterol = CoA + a sterol ester [goid 4772] [evidence IDA]; Catalysis of the reaction: acyl-CoA + a sterol = CoA + a sterol ester [goid 4772] [evidence ISO]	Acact; 8430426K15Rik; ACAT-1; ald	Acact; 8430426K15Rik; ACAT-1; ald
Mus musculus	RefSeq	ILMN_184602	ILMN_259411	SOAT1	NM_009230.3	NM_009230.3		20652	112363102	NM_009230.3	Soat1	NP_033256.2	ILMN_2419998	002570196	S	4286	AAGAAGATTGGGTTGGTAACCATGACCACGTTGGCCGCATTCGCAGGAGT	1	-	158358688-158358737	1qG3	Mus musculus sterol O-acyltransferase 1 (Soat1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence ISO]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + a sterol = CoA + a sterol ester [goid 4772] [evidence IDA]; Catalysis of the reaction: acyl-CoA + a sterol = CoA + a sterol ester [goid 4772] [evidence ISO]	Acact; 8430426K15Rik; ACAT-1; ald	Acact; 8430426K15Rik; ACAT-1; ald
Mus musculus	RefSeq	ILMN_207465	ILMN_252240	ANK3	NM_170688.2	NM_170688.2		11735	116256494	NM_170688.2	Ank3	NP_733789.1	ILMN_1223963	005130482	S	376	CTTGAAGCAGCCGCTCTGCCTGGGGAGTTCCCTAAATGGACTTTGGTCTC	10	+	68996831-68996880	10qB5.3	Mus musculus ankyrin 3, epithelial (Ank3), transcript variant 3, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Ankyrin-3; AnkG; 2900054D09Rik; AI314020; Ank-3; MGC14049	Ankyrin-3; AnkG; 2900054D09Rik; AI314020; Ank-3; MGC14049
Mus musculus	RefSeq	ILMN_220183	ILMN_220183	FAM118A	NM_133750.3	NM_133750.3		73225	47059085	NM_133750.3	Fam118a	NP_598511.1	ILMN_1255094	001710717	S	2319	GACAATTAAGAACAGGAAACATAGGTTGCTACAGGGAATGAGGGAGAAGC	15	+	84893118-84893167	15qE2	Mus musculus family with sequence similarity 118, member A (Fam118a), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C230014M12Rik	C230014M12Rik
Mus musculus	RefSeq	ILMN_200974	ILMN_200974	LOC381931	XM_355956.1	XM_355956.1			38087551	XM_355956.1	LOC381931		ILMN_1241878	006760682	S	707	AGGTAACTCTGTTTATTGGCTGCTGTCCTGCTGTCCGGCTGCTGTGCAAC										
Mus musculus	RefSeq	ILMN_217298	ILMN_317027	1700063H04RIK	XM_001481012.1	XM_001481012.1		74269	149255412	XM_001481012.1	1700063H04Rik	XP_001481062.1	ILMN_1244141	001660193	S	429	AGTCAGAAAGGCCACCGGGGAAGTACGGACAAAGAGTTGTGATCAGAGAC	6	+	122342317-122342366	6qF1	PREDICTED: Mus musculus RIKEN cDNA 1700063H04 gene (1700063H04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213140	ILMN_213140	4932411N23RIK	NM_177705.2	NM_177705.2		237029	31343243	NM_177705.2	4932411N23Rik	NP_808373.1	ILMN_2634091	001230669	S	3278	CCTGACTGTACCTGATAGCCCAGACATTTTATTACATGTTGTAGTATATC	X	-	123347079-123347128	XqE3	Mus musculus RIKEN cDNA 4932411N23 gene (4932411N23Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	RP23-267A6.1	RP23-267A6.1
Mus musculus	RefSeq	ILMN_225168	ILMN_225168	NRBF2	NM_001036293.2	NM_001036293.2		641340	118131016	NM_001036293.2	Nrbf2	NP_001031370.1	ILMN_2837888	002650750	S	1102	GAGATGCTCCTTCATCTGGTATGCTGTGGGAGAAGAGGTGGTGCCAGGAC	10	-	66730074-66730123	10qB5.1	Mus musculus nuclear receptor binding factor 2 (Nrbf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	Interacting selectively, in a ligand dependent manner, with a nuclear receptor protein [goid 16922] [evidence ISO]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]		
Mus musculus	Riken	ILMN_203626	ILMN_203626	SLC18A1	ri|C430018J19|PX00078J11|AK049514|2695					AK049514	Slc18a1		ILMN_1232398	001260048	S	2460	GCAAGAACTGGGTGTGCTGGCACAGGCCTTTAATCCTAGCACTTAGGAGC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of a drug, a substance used in the diagnosis, treatment or prevention of a disease, into, out of, within or between cells [goid 15893] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of a drug into, out of, within or between cells. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 15238] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198265	ILMN_326288	RNF165	XM_001481319.1	XM_001481319.1		225743	149270125	XM_001481319.1	Rnf165	XP_001481369.1	ILMN_1259244	000620142	S	794	TCACCTTCCCCCACAAGTATAAGAAGCGAAGACCCCAGGACAGCAAGGGC				18qE3	PREDICTED: Mus musculus ring finger protein 165 (Rnf165), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208894	ILMN_326288	RNF165	XM_001481319.1	XM_001481319.1		225743	149270125	XM_001481319.1	Rnf165	XP_001481369.1	ILMN_2726781	002630128	S	6877	GGTCCTCCGAGGGGGCTGTTTGTTGCCCCTGGTAAGTGAAAGGATTACCT				18qE3	PREDICTED: Mus musculus ring finger protein 165 (Rnf165), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208894	ILMN_326288	RNF165	XM_001481319.1	XM_001481319.1		225743	149270125	XM_001481319.1	Rnf165	XP_001481369.1	ILMN_2590554	000010544	S	4933	CGTTTCTGGGAGTGGAATGCTTTGCATGCGTTGGTACGATGACAACTGCG				18qE3	PREDICTED: Mus musculus ring finger protein 165 (Rnf165), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_255220	ILMN_255220	DEPDC5	NM_001025426.1	NM_001025426.1		277854	70909319	NM_001025426.1	Depdc5	NP_001020597.1	ILMN_3062654	002030259	I	5430	ACAGATTGTCCGTGGGAGTGAGTCAGTGTCTGGGAGTGGGGTAGGCAGCT	5	+	33334099-33334148	5qB1	Mus musculus DEP domain containing 5 (Depdc5), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA0645; AV016528; D5Ertd477e; mKIAA0645	KIAA0645; AV016528; D5Ertd477e; mKIAA0645
Mus musculus	RefSeq	ILMN_255220	ILMN_255220	DEPDC5	NM_001025426.1	NM_001025426.1		277854	70909319	NM_001025426.1	Depdc5	NP_001020597.1	ILMN_3140335	007330088	A	3622	GAGCCTAGGAGAACAGCAGACGACTGTGCACGGAAAAAGCTCCACTCAGC	5	+	33298502-33298551	5qB1	Mus musculus DEP domain containing 5 (Depdc5), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA0645; AV016528; D5Ertd477e; mKIAA0645	KIAA0645; AV016528; D5Ertd477e; mKIAA0645
Mus musculus	RefSeq	ILMN_221499	ILMN_255220	DEPDC5	NM_001025426.1	NM_001025426.1		277854	70909319	NM_001025426.1	Depdc5	NP_001020597.1	ILMN_2736418	001820020	S	268	CGAGTCATGGGAGTGCATAACAGTTCGAGTGACCTTGGGCGAATCCCTTG	5	+	33206825-33206874	5qB1	Mus musculus DEP domain containing 5 (Depdc5), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA0645; AV016528; D5Ertd477e; mKIAA0645	KIAA0645; AV016528; D5Ertd477e; mKIAA0645
Mus musculus	RefSeq	ILMN_197242	ILMN_315043	4932441B19RIK	NM_001083890.1	NM_001083890.1		238683	141801795	NM_001083890.1	4932441B19Rik	NP_001077359.1	ILMN_1236220	003520360	S	2458	GGCTGAGGTCTTGGGTAAGAGACTAACTTCTGGCAAAACAGTCCAGCGCC	13	+	65138380-65138429	13qB3	Mus musculus RIKEN cDNA 4932441B19 gene (4932441B19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211210	ILMN_211210	PAX2	NM_011037.3	NM_011037.3		18504	153945774	NM_011037.3	Pax2	NP_035167.3	ILMN_1227108	004250274	S	74	TGTTTGTGAACGGCCGGCCCCTACCCGACGTGGTGAGGCAGCGCATCGTG				19qC3	Mus musculus paired box gene 2 (Pax2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is a transient excretory organ of the embryo [goid 1823] [evidence IMP]; A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell [goid 60231] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43069] [evidence IMP]; Any process that modulates the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43067] [evidence IGI]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Pax-2	Pax-2
Mus musculus	RefSeq	ILMN_212110	ILMN_212110	APOL9B	NM_173743.3	NM_173743.3		71898	141803109	NM_173743.3	Apol9b	NP_776104.1	ILMN_2622856	004280093	S	1144	CGAGAGACCCAGTGTGTAGGCCTGCTGCTGAACACAGCACAATCAGGTGA	15	+	77566459-77566508	15qE1	Mus musculus apolipoprotein L 9b (Apol9b), mRNA.					
Mus musculus	Riken	ILMN_206971	ILMN_206971	4931422A14RIK	ri|4931422A14|PX00641A20|AK076999|1856					AK076999	4931422A14Rik		ILMN_2584065	004570300	S	1638	GGTCATGGCTGTGGAAGAGCTGGCCCTGATCTTATTAGTATACTGTGTGA										
Mus musculus	MEEBO	ILMN_213318	ILMN_213318	9130019P16RIK	scl071574.1_289	XM_132567.3			28524342	XM_132567.3	9130019P16Rik		ILMN_1224396	003170026	S	908	GAGCATGACCACCCAGGTGAAGGGATCGGAGTTAGCTTCTCAGAGGGTTT										
Mus musculus	RefSeq	ILMN_186465	ILMN_241892	2700062C07RIK	NM_026529.4	NM_026529.4		68046	146135044	NM_026529.4	2700062C07Rik	NP_080805.1	ILMN_1225527	006280373	S	822	CCAAGCCTCCTCGGCCTCCCTGGTGAATGTGAAGACCAAAAAGTAAAGGA				18qA2	Mus musculus RIKEN cDNA 2700062C07 gene (2700062C07Rik), mRNA.				AI195775; C87515; MGC103375	AI195775; C87515; MGC103375
Mus musculus	RefSeq	ILMN_186465	ILMN_241892	2700062C07RIK	NM_026529.4	NM_026529.4		68046	146135044	NM_026529.4	2700062C07Rik	NP_080805.1	ILMN_1245380	001410228	S	653	AGCTGGACTTCAGGCACTTCTTATCTTCTCTATGAAGAGAATGGCCTCTG				18qA2	Mus musculus RIKEN cDNA 2700062C07 gene (2700062C07Rik), mRNA.				AI195775; C87515; MGC103375	AI195775; C87515; MGC103375
Mus musculus	MEEBO	ILMN_214679	ILMN_214679	5330417C22RIK	scl21648.14_328	XM_203978.3			38076951	XM_203978.3	5330417C22Rik		ILMN_1258347	006200327	S	5404	GCAAGGGAGAACGGCTTTAGTCTTTGAGCCAGGACTGTGGTAGTCTGCGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_198352	ILMN_198352	LOC194372	XM_110600.1	XM_110600.1			20341765	XM_110600.1	LOC194372		ILMN_1219725	004760647	S	554	CGCTGGTATTGCAAGGGTGCTCAGCAACAAGGTCTGTTTCCTAGGAATTG										
Mus musculus	RefSeq	ILMN_222346	ILMN_222346	OLFR724	NM_146492.1	NM_146492.1		258485	33238971	NM_146492.1	Olfr724	NP_666703.1	ILMN_1218277	006280369	S	877	GAAATGAAGAAAGCCATGAGAAAATTATGGAACCAACAAGTGAGCTGCAG	14	-	50579819-50579868	14qC1	Mus musculus olfactory receptor 724 (Olfr724), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR247-2	MOR247-2
Mus musculus	RefSeq	ILMN_213903	ILMN_213903	SRP9	NM_012058.2	NM_012058.2		27058	31560508	NM_012058.2	Srp9	NP_036188.1	ILMN_1260348	006110132	S	760	GCTGCAGTGGTATGTTTCTTTTGGAGTACAACATGTATGCCGTTTACAAC	1	+	184061931-184061980	1qH5	Mus musculus signal recognition particle 9 (Srp9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A complex of protein and RNA which facilitates translocation of proteins across membranes [goid 48500] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of translational elongation [goid 45900] [evidence IEA]; The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with 7S RNA, the RNA component of the signal recognition particle (SRP) [goid 8312] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9kDa	9kDa
Mus musculus	RefSeq	ILMN_213903	ILMN_213903	SRP9	NM_012058.2	NM_012058.2		27058	31560508	NM_012058.2	Srp9	NP_036188.1	ILMN_2779746	002450504	S	1096	AGCATGCCTCTCAGAACTGCTAGCTTCCTAATAAACCACAAATCCACCGT	1	+	184062267-184062316	1qH5	Mus musculus signal recognition particle 9 (Srp9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A complex of protein and RNA which facilitates translocation of proteins across membranes [goid 48500] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of translational elongation [goid 45900] [evidence IEA]; The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with 7S RNA, the RNA component of the signal recognition particle (SRP) [goid 8312] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9kDa	9kDa
Mus musculus	RefSeq	ILMN_210270	ILMN_210270	SMC1B	NM_080470.1	NM_080470.1		140557	17978289	NM_080470.1	Smc1b	NP_536718.1	ILMN_2603908	000730328	S	3753	CCCCAGTCTCGTTAGAAATGAGTATACTCTTGAACAGCCACCAGCTATAG	15	-	84895356-84895391:84895392-84895405	15qE2	Mus musculus structural maintenance of chromosomes 1B (Smc1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; The cell cycle process by which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome [goid 7062] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	SMC1beta; Smc1l2	SMC1beta; Smc1l2
Mus musculus	MEEBO	ILMN_223562	ILMN_223562	GM1549	scl54390.1.1_5	XM_358386.1			38086019	XM_358386.1	Gm1549		ILMN_2765810	005570243	S	23	TGGAAAAGGTGAGACACGGGAATGGAATGCCGAGATTTCTCAGTAGCAGG										
Mus musculus	RefSeq	ILMN_219078	ILMN_219078	OLFR741	NM_207133.2	NM_207133.2		258233	112821671	NM_207133.2	Olfr741	NP_997016.2	ILMN_1215066	000380088	S	1019	GAGGCCGGAATGCAGAAGCTTGTAACTCTATTTTATTCTGTGGGTACACC	14	+	51105945-51105994	14qC1	Mus musculus olfactory receptor 741 (Olfr741), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR106-15; MOR106-10	MOR106-15; MOR106-10
Mus musculus	Riken	ILMN_206267	ILMN_206267	TULIP1-PENDING	ri|D030038P19|PX00180J02|AK083518|3898					AK083518	Tulip1-pending		ILMN_1234249	001260008	S	3725	GTGCCAGAAACAGCATGGAAGCTCCACACCCCTTCTTCATCTCTTACCCC										
Mus musculus	RefSeq	ILMN_227184	ILMN_227184	OLFR453	NM_001011799.1	NM_001011799.1		258016	58801363	NM_001011799.1	Olfr453	NP_001011799.1	ILMN_3162167	003060576	S	537	CGAGCTGCTTGCTGTGGTGAGGCTGGCCTGTGTGGACACCTCTGCCAATG	6	+	42694574-42694623	6qB2.1	Mus musculus olfactory receptor 453 (Olfr453), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISO]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISO]	MOR257-8P	MOR257-8P
Mus musculus	RefSeq	ILMN_223195	ILMN_223195	GZMK	NM_008196.1	NM_008196.1		14945	6680142	NM_008196.1	Gzmk	NP_032222.1	ILMN_2921185	004490709	S	215	CCAGAGGCCACTCTCCCACCGTGGTTTTAGGAGCACATTCTCTTTCCAAG	13	-	113964226-113964275	13qD2.2	Mus musculus granzyme K (Gzmk), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218406	ILMN_218406	BC008163	NM_145553.1	NM_145553.1		230789	21704089	NM_145553.1	BC008163	NP_663528.1	ILMN_2695427	004640470	S	797	AAAGAGAAGAAGATCACGGAGCTGAAGGCTGATTTTCAGTACCAGGAGTC	4	-	132457981-132458019:132459813-132459823	4qD2.3	Mus musculus cDNA sequence BC008163 (BC008163), mRNA.				MGC11672; RP23-464L12.5	MGC11672; RP23-464L12.5
Mus musculus	RefSeq	ILMN_218406	ILMN_218406	BC008163	NM_145553.1	NM_145553.1		230789	21704089	NM_145553.1	BC008163	NP_663528.1	ILMN_1242176	001400685	S	1438	GCTTCAGGGTATACTCTTGGGTTTTTTCCAGGTATATTATGTATGACCTT	4	-	132456646-132456695	4qD2.3	Mus musculus cDNA sequence BC008163 (BC008163), mRNA.				MGC11672; RP23-464L12.5	MGC11672; RP23-464L12.5
Mus musculus	Riken	ILMN_206034	ILMN_206034	D030064C08RIK	ri|D030064C08|PX00181C12|AK051065|3564					AK051065	D030064C08Rik		ILMN_1229778	007160463	S	3327	CATAGTTGGCCAAGGCCACTGCTGAGCAGGTTCCAGATAAGCGGAGTGAG										
Mus musculus	RefSeq	ILMN_219757	ILMN_240873	FHL1	NM_001077361.1	NM_001077361.1		14199	116517339	NM_001077361.1	Fhl1	NP_001070829.1	ILMN_2713285	005550309	S	2456	GGTTTTCACCCCCTTCTCTGAAACGCAGGATTGCCTCCTTAACTGTACTC	X	+	54046293-54046342	XqA5	Mus musculus four and a half LIM domains 1 (Fhl1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KyoT	KyoT
Mus musculus	RefSeq	ILMN_186641	ILMN_240873	FHL1	NM_001077361.1	NM_001077361.1		14199	116517339	NM_001077361.1	Fhl1	NP_001070829.1	ILMN_2437254	006480594	S	1013	CCAGTCTCTAAAGCTAGGAAGTCCCCAGTGTGCCACGGGAAACGCTTGCC	X	+	54044445-54044494	XqA5	Mus musculus four and a half LIM domains 1 (Fhl1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KyoT	KyoT
Mus musculus	MEEBO	ILMN_223505	ILMN_223505	A430105I19RIK	scl18815.10.1_30	XM_141317.3			38075610	XM_141317.3	A430105I19Rik		ILMN_1217464	007000326	S	1224	CGTACAGAAGCGGAATGAAAGGGAGCCAGACAGACAAGAGACCGTGCCTG										
Mus musculus	RefSeq	ILMN_209317	ILMN_209317	CORT	NM_007745.2	NM_007745.2		12854	31982453	NM_007745.2	Cort	NP_031771.1	ILMN_2955725	007560377	S	435	CTGGGCATAGCACCCTGGCCACCCTGTGAGATGCCAACGAGACCTGAATA	4	-	147969004-147969053	4qE2	Mus musculus cortistatin (Cort), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	CST; PCST	CST; PCST
Mus musculus	RefSeq	ILMN_209087	ILMN_209087	4930486G11RIK	NM_175213.3	NM_175213.3		75033	141803039	NM_175213.3	4930486G11Rik	NP_780422.1	ILMN_2592395	006840497	S	3002	CTGTCATTCTGAATACCCAGTGTAGTCAGTTTCTGGCTAATGAACTGGCT	9	+	81921039-81921088	9qE1	Mus musculus RIKEN cDNA 4930486G11 gene (4930486G11Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_197652	ILMN_197652	LOC380963	XM_358473.1	XM_358473.1			38077125	XM_358473.1	LOC380963		ILMN_1244709	002710133	S	741	GGCTACTCAGAGGTCCTATGGCTCTCAGAACAGGAAAGGCTTCCCCATGG										
Mus musculus	Riken	ILMN_204763	ILMN_204763	SGCD	ri|B930054G04|PX00164K23|AK047384|3080					AK047384	Sgcd		ILMN_1235611	005050630	S	2804	TCACATGGTTTTAAGCAGGACATGATCATATTCACAGCATGGCTTGGGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210049	ILMN_210049	A530088H08RIK	NM_178656.2	NM_178656.2		193003	31340968	NM_178656.2	A530088H08Rik	NP_848771.1	ILMN_2901131	001440446	S	2847	CTGGGCACAGCTGTGGGAAGACCTTTGCAGATCTCACTTTCAAGTATGTC	11	+	66744728-66744777	11qB3	Mus musculus RIKEN cDNA A530088H08 gene (A530088H08Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211938	ILMN_211938	TRIM62	NM_178110.2	NM_178110.2		67525	31342487	NM_178110.2	Trim62	NP_835211.1	ILMN_2620942	001260040	S	2787	GGCCTTGGCTTTGAAACAGAACTGCTAAAAATGTCCTGCTCCGTGACTCT	4	+	128588159-128588208	4qD2.2	Mus musculus tripartite motif-containing 62 (Trim62), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI450348; 6330414G21Rik	AI450348; 6330414G21Rik
Mus musculus	RefSeq	ILMN_223493	ILMN_223493	NUFIP1	NM_013745.2	NM_013745.2		27275	31543354	NM_013745.2	Nufip1	NP_038773.1	ILMN_2907093	001710053	S	3816	CTGTTTCCCCTGCTGACTTTTTACCAATATCCTGCTTTTGGGAACAGGTG	14	+	74871376-74871425	14qD3	Mus musculus nuclear fragile X mental retardation protein interacting protein 1 (Nufip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation [goid 8023] [evidence ISS]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence ISS]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISS]; A specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, synaptic vesicles, and a specialized cortical cytoskeletal matrix [goid 48786] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; Structures of variable diameter visible in the nucleoplasm by electron microscopy, mainly observed near the border of condensed chromatin. The fibrils are enriched in RNA, and are believed to be sites of pre-mRNA splicing and polyadenylylation representing the in situ form of nascent transcripts [goid 5726] [evidence ISS]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nufip	Nufip
Mus musculus	RefSeq	ILMN_231959	ILMN_231959	MOCOS	NM_026779.1	NM_026779.1		68591	110625678	NM_026779.1	Mocos	NP_081055.1	ILMN_2906489	006480201	S	2748	TGGATTTATCGTCTCCATGTTTCCTGTCAGTGGGATCGGAGGTGCTCCCC	18	+	24859921-24859970	18qA2	Mus musculus molybdenum cofactor sulfurase (Mocos), mRNA.		The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with molybdenum (Mo) ions [goid 30151] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MOS; HMCS; 1110018O12Rik	MOS; HMCS; 1110018O12Rik
Mus musculus	Riken	ILMN_205588	ILMN_205588	B430203G13RIK	ri|B430203G13|PX00071K01|AK046603|1376					AK046603	B430203G13Rik		ILMN_1233385	000010138	S	1130	GCCACCAGTCAAGAGATAGAGGCCGGGACACTGTGATTTGGGGATGCTTC										
Mus musculus	RefSeq	ILMN_253796	ILMN_253796	ZFP180	NM_001045486.1	NM_001045486.1		210135	113866021	NM_001045486.1	Zfp180	NP_001038951.1	ILMN_2803368	002480121	S	351	TGGAGTCCCTGCAGGCCTGTGTGGAGAACTTTGTTCTACCCCAAGAGATG	7	+	24870500-24870525:24882840-24882863	7qA3	Mus musculus zinc finger protein 180 (Zfp180), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	HHZ168; AI852378; D130011P11; 2310040I01Rik	HHZ168; AI852378; D130011P11; 2310040I01Rik
Mus musculus	RefSeq	ILMN_220674	ILMN_220674	SFI1	NM_030207.2	NM_030207.2		78887	124358937	NM_030207.2	Sfi1	NP_084483.2	ILMN_1256699	004640692	S	3674	GCTAAGCCAGGAGGAGCCGAAATCCGAGGACCTTCACCTAGAAGAGCAGG	11	-	3032238-3032287	11qA1	Mus musculus Sfi1 homolog, spindle assembly associated (yeast) (Sfi1), mRNA.				mKIAA0542; RP23-191E3.10; 2310047I15Rik	mKIAA0542; RP23-191E3.10; 2310047I15Rik
Mus musculus	RefSeq	ILMN_220674	ILMN_220674	SFI1	NM_030207.2	NM_030207.2		78887	124358937	NM_030207.2	Sfi1	NP_084483.2	ILMN_1260218	004250553	S	693	GCCTGGAAGTCCTGGTTGATATACATGGTTTCTCGTAGGACCAAACTTCA	11	-	3070634-3070683	11qA1	Mus musculus Sfi1 homolog, spindle assembly associated (yeast) (Sfi1), mRNA.				mKIAA0542; RP23-191E3.10; 2310047I15Rik	mKIAA0542; RP23-191E3.10; 2310047I15Rik
Mus musculus	RefSeq	ILMN_213371	ILMN_213371	1110020P15RIK	NM_197979.2	NM_197979.2		66152	114155121	NM_197979.2	1110020P15Rik	NP_932096.1	ILMN_3142224	000870382	A	325	CGTTCACCGACCGCCAGTGTGTGGGCAAGCTATGGCTCCACTGTACAAAC	11	-	4602037-4602086	11qA1	Mus musculus RIKEN cDNA 1110020P15 gene (1110020P15Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]	RP23-280J3.4; AA960494	RP23-280J3.4; AA960494
Mus musculus	RefSeq	ILMN_213371	ILMN_213371	1110020P15RIK	NM_197979.2	NM_197979.2		66152	114155121	NM_197979.2	1110020P15Rik	NP_932096.1	ILMN_2636384	005290475	S	311	GAGTTTCAAGTTGCCGTTCACCGACCGCCAGTGTGTGGGCAAGCTATGGC	11	-	4602051-4602100	11qA1	Mus musculus RIKEN cDNA 1110020P15 gene (1110020P15Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]	RP23-280J3.4; AA960494	RP23-280J3.4; AA960494
Mus musculus	RefSeq	ILMN_197821	ILMN_197821	LOC268853	XM_196141.2	XM_196141.2			38078551	XM_196141.2	LOC268853		ILMN_1258404	002650403	S	471	CTGGAACAAGCCACAGCCAACAAGGAACAGGTCCACTGGCAAGTTGCTGG										
Mus musculus	RefSeq	ILMN_216218	ILMN_216218	2900024C23RIK	NM_026062.2	NM_026062.2		67266	31560190	NM_026062.2	2900024C23Rik	NP_080338.1	ILMN_2842802	000060601	S	2222	GAAACGTCCTAGACACCCCCTTCTCCTCAAACCAAATTTCACCGTTGTTC	5	-	108148752-108148801	5qF	Mus musculus RIKEN cDNA 2900024C23 gene (2900024C23Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI315274; MGC144843	AI315274; MGC144843
Mus musculus	RefSeq	ILMN_215335	ILMN_215335	IGF1	NM_010512.3	NM_010512.3		16000	133892662	NM_010512.3	Igf1	NP_034642.1	ILMN_1225565	000450632	S	286	AAGCCTACAAAAGCAGCCCGCTCTATCCGTGCCCAGCGCCACACTGACAT	10	+	87376480-87376529	10qC1	Mus musculus insulin-like growth factor 1 (Igf1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The chemical reactions and pathways resulting in the formation of chondroitin sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are chondroitin sulfate. Chondroitin sulfates are a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues; the repeat units consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate [goid 50650] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IC ]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of any steroid hormone receptor signaling pathway [goid 33143] [evidence ISO]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IDA]; The process that activates or increases the rate or extent of granule cell precursor proliferation [goid 21940] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of water within an organism or cell [goid 30104] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the insulin-like growth factor receptor [goid 5159] [evidence IPI]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Igf-I; C730016P09Rik; Igf-1	Igf-I; C730016P09Rik; Igf-1
Mus musculus	RefSeq	ILMN_215335	ILMN_215335	IGF1	NM_010512.3	NM_010512.3		16000	133892662	NM_010512.3	Igf1	NP_034642.1	ILMN_2769884	002000647	S	661	GCACCTTGCAAAAGTGGTCCTGGCGTGGGTAGATTGCTGTTGGTCCTTTA	10	+	87393677-87393726	10qC1	Mus musculus insulin-like growth factor 1 (Igf1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The chemical reactions and pathways resulting in the formation of chondroitin sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are chondroitin sulfate. Chondroitin sulfates are a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues; the repeat units consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate [goid 50650] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IC ]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of any steroid hormone receptor signaling pathway [goid 33143] [evidence ISO]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IDA]; The process that activates or increases the rate or extent of granule cell precursor proliferation [goid 21940] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of water within an organism or cell [goid 30104] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the insulin-like growth factor receptor [goid 5159] [evidence IPI]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Igf-I; C730016P09Rik; Igf-1	Igf-I; C730016P09Rik; Igf-1
Mus musculus	RefSeq	ILMN_220509	ILMN_220509	C330043M08RIK	NM_177883.3	NM_177883.3		330323	142382035	NM_177883.3	C330043M08Rik	NP_808551.1	ILMN_2722993	002030735	S	1925	TGAGAGGCCCAGTGTGTCCCCTCATTCCCCTCCATATGCATTGGTATAGA	6	+	55228333-55228382	6qB3	Mus musculus RIKEN cDNA C330043M08 gene (C330043M08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221732	ILMN_221732	2410137M14RIK	NM_029747.2	NM_029747.2		76797	142369029	NM_029747.2	2410137M14Rik	NP_084023.1	ILMN_2739645	003420131	S	754	GGATCTGGTGGTGTTTGGCTTTTGTATTCTGTCCCTGGATATGAAGGCTC	17	-	37163424-37163473	17qB1	Mus musculus RIKEN cDNA 2410137M14 gene (2410137M14Rik), mRNA.				RP23-98F21.3	RP23-98F21.3
Mus musculus	MEEBO	ILMN_190995	ILMN_190995	22164589_5684_RC	22164589_5684_rc						22164589_5684_rc		ILMN_2475155	002900035	S	18	TTATTTCGTATATCCGAACTCAGACAAGAGATAGCTTGTTTAGCTTGAGC										
Mus musculus	MEEBO	ILMN_215878	ILMN_215878	CHIC1	scl54720.6_16				51772273	XM_486740	Chic1		ILMN_2664706	002900079	S	2827	CAATCCTCAGCAATCTTACATTTCGTCTGTAGCCTTAGAATTTGACCAAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_214432	ILMN_214432	TRAC	scl000363.1_1				15795314	AE008686	TRAC		ILMN_2647979	001740292	S	439955	GCTGTGTGACTCGGGATACAACAAACTCACTTTTGGAAAGGGCACGGTGC										
Mus musculus	RefSeq	ILMN_197526	ILMN_254122	LOC673157	XR_004148.1	XR_004148.1		673157	94418739	XR_004148.1	LOC673157		ILMN_2528443	002850435	S	79	GCCAGAGCCAGCTCTTGGTGGACCCATATCGAAATGGAACCTCCAGATTC					PREDICTED: Mus musculus similar to Aspartate aminotransferase, mitochondrial precursor (Transaminase A) (Glutamate oxaloacetate transaminase 2) (LOC673157), mRNA.					
Mus musculus	RefSeq	ILMN_218928	ILMN_218928	TUBB2C	NM_146116.1	NM_146116.1		227613	22165383	NM_146116.1	Tubb2c	NP_666228.1	ILMN_2702061	005890162	S	1238	ACTGGTACACGGGTGAAGGCATGGATGAGATGGAGTTCACTGAGGCTGAG	2	-	25077929-25077978	2qA3	Mus musculus tubulin, beta 2c (Tubb2c), mRNA.	A heterodimer of tubulins alpha and beta that constitutes the protomer for microtubule assembly [goid 45298] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence NAS]	4930542G03Rik; MGC6713; MGC28623; RP23-132N23.7; MGC101937	4930542G03Rik; MGC6713; MGC28623; RP23-132N23.7; MGC101937
Mus musculus	Riken	ILMN_202518	ILMN_202518	OGG1	ri|2010011J20|ZX00081B07|AK008192|483					AK008192	Ogg1		ILMN_2550230	003850538	S	340	TCTGCCTCCAGCGTGCTGAGATTACAGGCATATGTGTGCTACCTACCAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IDA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [evidence IDA]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the removal of oxidized bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 702] [evidence TAS]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [evidence IEA]; Catalysis of the removal of 8-oxo-7,8-dihydroguanine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar [goid 34039] [evidence IMP]		
Mus musculus	MEEBO	ILMN_185154	ILMN_185154	ANGPTL4	scl50042.7_106				10181163	NM_020581	Angptl4		ILMN_2424627	001440095	S	20	TTTCTGATCAGTACTCGGTGGGGTACACACAGATCTCCAGCCCCTGGGAG						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]	A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment [goid 9267] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; Any process that stops or reduces the activity of the enzyme lipoprotein lipase [goid 51005] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipids [goid 45834] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_211434	ILMN_211434	PHTF1	scl22773.20.1_35	XM_356222.1			38090226	XM_356222.1	Phtf1		ILMN_2615864	004560086	S	2268	GGCCTGTGTTAAAAACCTGCACTTTCATGGTTCTCAAGCAACGTGAATAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	MEEBO	ILMN_221647	ILMN_221647	LOC330776	scl0330776.3_4	XM_284420.1			28484583	XM_284420.1	LOC330776		ILMN_2738362	002490162	S	7	CCTTATTCTCTGCCAAGGAATGCAATGAATTTTAAAGGACGTTGGAAACA										
Mus musculus	RefSeq	ILMN_195243	ILMN_260929	EG245174	XM_893600.3	XM_893600.3		245174	149250048	XM_893600.3	EG245174	XP_898693.3	ILMN_1253196	002450209	S	2784	GGCCACGAATATGAATGGAAATATACAACTTATGGGACAGAAGGAAGGGG	2	+	150066373-150066422	2qG3	PREDICTED: Mus musculus predicted gene, EG245174 (EG245174), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223121	ILMN_326867	LOC100046254	XM_001475816.1	XM_001475816.1		100046254	149263039	XM_001475816.1	LOC100046254	XP_001475866.1	ILMN_1231567	005560369	S	1361	GTACATTCATGTGTACCTACAGTATTTTACTTGGTTCATTAAAACCTCCC					PREDICTED: Mus musculus similar to Adi1 protein (LOC100046254), mRNA.					
Mus musculus	RefSeq	ILMN_242967	ILMN_242967	AGR3	NM_207531.1	NM_207531.1		403205	46430521	NM_207531.1	Agr3	NP_997414.1	ILMN_2902353	005340494	S	632	AATACCAAATGTGCAAGTCCATGGATTTTTATAACATCACTATTTGGCTT	12	+	36459881-36459930	12qA3	Mus musculus anterior gradient homolog 3 (Xenopus laevis) (Agr3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			BCMP11; E030025L21Rik; Gm888	BCMP11; E030025L21Rik; Gm888
Mus musculus	RefSeq	ILMN_209364	ILMN_209364	PPP1CA	NM_031868.2	NM_031868.2		19045	133892519	NM_031868.2	Ppp1ca	NP_114074.1	ILMN_1246058	001110025	S	139	GAACGAGATCCGTGGTCTGTGCCTCAAATCCCGGGAGATTTTCCTGAGCC	19	+	4192785-4192834	19qA	Mus musculus protein phosphatase 1, catalytic subunit, alpha isoform (Ppp1ca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence TAS]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle in the female germline [goid 7143] [evidence TAS]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISS]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence TAS]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	dism2; Ppp1c	dism2; Ppp1c
Mus musculus	RefSeq	ILMN_213312	ILMN_209364	PPP1CA	NM_031868.2	NM_031868.2		19045	133892519	NM_031868.2	Ppp1ca	NP_114074.1	ILMN_1215400	002480470	S	1301	GCCATGCAAGGCTGGAGACCCACAATCTGGTCTGCCATTGCCCTGAGCTG	19	+	4195357-4195406	19qA	Mus musculus protein phosphatase 1, catalytic subunit, alpha isoform (Ppp1ca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence TAS]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle in the female germline [goid 7143] [evidence TAS]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISS]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence TAS]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	dism2; Ppp1c	dism2; Ppp1c
Mus musculus	RefSeq	ILMN_209364	ILMN_209364	PPP1CA	NM_031868.2	NM_031868.2		19045	133892519	NM_031868.2	Ppp1ca	NP_114074.1	ILMN_2691613	002470017	S	1072	TACAGAAATCATGCTGCCATGGGTCACACTGGCCTCTCAGGCCCACCCGT	19	+	4195128-4195177	19qA	Mus musculus protein phosphatase 1, catalytic subunit, alpha isoform (Ppp1ca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence TAS]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle in the female germline [goid 7143] [evidence TAS]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISS]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence TAS]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	dism2; Ppp1c	dism2; Ppp1c
Mus musculus	RefSeq	ILMN_222740	ILMN_245324	KRT24	NM_029393.1	NM_029393.1		75706	122425579	NM_029393.1	Krt24	NP_083669.1	ILMN_1243795	000840292	S	1482	GGGTGACAAAGACCATCATAGAGGAGGTGGTGGATGGTAGAGTTGTCTCG	11	-	99141564-99141613	11qD	Mus musculus keratin 24 (Krt24), mRNA. XM_985635 XM_985673 XM_985705	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2310058N18Rik; 2310075C18Rik	2310058N18Rik; 2310075C18Rik
Mus musculus	RefSeq	ILMN_201991	ILMN_210014	OXCT1	NM_024188.5	NM_024188.5		67041	142378044	NM_024188.5	Oxct1	NP_077150.1	ILMN_1236757	003420500	S	2890	CCTCCATAGTACACCCTCTAGGTAGGACTGCTTTAGTGGATGGCCACGTG	15	+	4105014-4105063	15qA1	Mus musculus 3-oxoacid CoA transferase 1 (Oxct1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Ketone bodies can be used as an energy source as an alternative to glucose. Utilization of ketone bodies in peripheral tissues involves conversion of acetoacetate to acetoacetyl-CoA, which is then converted to two molecules of acetyl-CoA [goid 46952] [evidence IEA]; The chemical reactions and pathways involving ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone, as carried out by individual cells. Although 3-hydroxybutyrate is not a ketone, it is classed as a ketone body because it exists in an equilibrium with acetoacetate. Ketone bodies may accumulate in excessive amounts in the body in starvation, diabetes mellitus or in other defects of carbohydrate metabolism [goid 46950] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a coenzyme A (CoA) group from one compound (donor) to another (acceptor) [goid 8410] [evidence IEA]; Catalysis of the reaction: succinyl-CoA + a 3-oxo acid = succinate + a 3-oxo-acyl-CoA [goid 8260] [evidence IDA]	Scot-s; 2610008O03Rik; Oxct; Oxct2a	Scot-s; 2610008O03Rik; Oxct; Oxct2a
Mus musculus	RefSeq	ILMN_210014	ILMN_210014	OXCT1	NM_024188.5	NM_024188.5		67041	142378044	NM_024188.5	Oxct1	NP_077150.1	ILMN_1231503	003460670	S	1202	CTCCCAGGAGCCTCTTTCTTCTCCAGCGATGAGTCATTCGCCATGATTAG	15	+	4051147-4051196	15qA1	Mus musculus 3-oxoacid CoA transferase 1 (Oxct1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Ketone bodies can be used as an energy source as an alternative to glucose. Utilization of ketone bodies in peripheral tissues involves conversion of acetoacetate to acetoacetyl-CoA, which is then converted to two molecules of acetyl-CoA [goid 46952] [evidence IEA]; The chemical reactions and pathways involving ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone, as carried out by individual cells. Although 3-hydroxybutyrate is not a ketone, it is classed as a ketone body because it exists in an equilibrium with acetoacetate. Ketone bodies may accumulate in excessive amounts in the body in starvation, diabetes mellitus or in other defects of carbohydrate metabolism [goid 46950] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a coenzyme A (CoA) group from one compound (donor) to another (acceptor) [goid 8410] [evidence IEA]; Catalysis of the reaction: succinyl-CoA + a 3-oxo acid = succinate + a 3-oxo-acyl-CoA [goid 8260] [evidence IDA]	Scot-s; 2610008O03Rik; Oxct; Oxct2a	Scot-s; 2610008O03Rik; Oxct; Oxct2a
Mus musculus	Riken	ILMN_206317	ILMN_206317	CLN2	ri|D130017L13|PX00182N07|AK083832|3688					AK083832	Cln2		ILMN_2579206	005690037	S	1010	GGTGCTCAGGCTGGAGTGAATCCTTCCCCTGCTTAAAGTCCTGTATGGTG										
Mus musculus	Riken	ILMN_202028	ILMN_202028	1700028I04RIK	ri|1700028I04|ZX00050N16|AK006460|302					AK006460	1700028I04Rik		ILMN_2546481	004570475	S	4	AGACCAGGCAACCACTGAATGCTCAGCCCAGGGGGACAAAGAGAGGCCAT										
Mus musculus	RefSeq	ILMN_208921	ILMN_255598	DAAM2	NM_001008231.2	NM_001008231.2		76441	116089317	NM_001008231.2	Daam2	NP_001008232.2	ILMN_2590815	001030093	S	4707	CTGTGTTGATGGTATTGGTTGGGTGGCACTGCTACATCTAGTCACATTTC	17	-	49596635-49596684	17qC	Mus musculus dishevelled associated activator of morphogenesis 2 (Daam2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	2310016D11Rik; AW557870; AI843643	2310016D11Rik; AW557870; AI843643
Mus musculus	RefSeq	ILMN_255598	ILMN_255598	DAAM2	NM_001008231.2	NM_001008231.2		76441	116089317	NM_001008231.2	Daam2	NP_001008232.2	ILMN_3162050	005560398	S	3328	ACAGCGTGAGAAAGAGAGATGGCAGAGGCAGAGGAAGGTCTTGGCTGGCG	17	-	49598014-49598063	17qC	Mus musculus dishevelled associated activator of morphogenesis 2 (Daam2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	2310016D11Rik; AW557870; AI843643	2310016D11Rik; AW557870; AI843643
Mus musculus	Riken	ILMN_201746	ILMN_201746	ORC4	ri|2810004E23|ZX00045P20|AK012669|1152					AK012669	Orc4		ILMN_1241166	005810110	S	699	GCCTGCAGTACTGTCTTTCTTATCTTACCACTCTTTGCTCTGTGCTGCAG										
Mus musculus	RefSeq	ILMN_198081	ILMN_234138	LOC667165	XR_001986.1	XR_001986.1		667165	94401586	XR_001986.1	LOC667165		ILMN_2530424	002650048	S	604	AGTCAGCACATCAAGACCACTGGCCACGGGGACCCCACTGTGGATGTACC	17	+	8941247-8941296	17qA1	PREDICTED: Mus musculus similar to ribosomal protein S18 (LOC667165), mRNA.					
Mus musculus	RefSeq	ILMN_226511	ILMN_219212	OLA1	NM_025942.2	NM_025942.2		67059	76677912	NM_025942.2	Ola1	NP_080218.1	ILMN_3163044	000620288	A	606	TCACGAGGAGCTCCAGCTGAAGGACGAGGAGATGATTGGGCCCATTCTAG	2	-	72994850-72994899	2qC3	Mus musculus Obg-like ATPase 1 (Ola1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	2510025G09Rik; Gtpbp9; RP23-275P21.1; PTD004; 2810405J23Rik; 2810409H07Rik	2510025G09Rik; Gtpbp9; RP23-275P21.1; PTD004; 2810405J23Rik; 2810409H07Rik
Mus musculus	RefSeq	ILMN_219212	ILMN_219212	OLA1	NM_025942.2	NM_025942.2		67059	76677912	NM_025942.2	Ola1	NP_080218.1	ILMN_2705743	005390246	S	1314	CTTCAAATTTAATACACCTCAGCAACCAAAAAAGAAATAAATTCAGTTAT	2	-	72931669-72931679:72931680-72931718	2qC3	Mus musculus Obg-like ATPase 1 (Ola1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	2510025G09Rik; Gtpbp9; RP23-275P21.1; PTD004; 2810405J23Rik; 2810409H07Rik	2510025G09Rik; Gtpbp9; RP23-275P21.1; PTD004; 2810405J23Rik; 2810409H07Rik
Mus musculus	RefSeq	ILMN_187312	ILMN_260712	SEPT12	NM_027669.2	NM_027669.2		71089	142388519	NM_027669.2	Sept12	NP_081945.1	ILMN_1236861	001940279	S	982	GCCCAACCTGGATGGCAACCATGACTTGCAAAACTTAATGTAGCCCCACT	16	-	4988422-4988434:4988435-4988471	16qA1	Mus musculus septin 12 (Sept12), mRNA.			Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC144518; 1700028G04Rik; 4933413B09Rik	MGC144518; 1700028G04Rik; 4933413B09Rik
Mus musculus	RefSeq	ILMN_240192	ILMN_240192	D630037F22RIK	NM_001033385.1	NM_001033385.1		544696	85701880	NM_001033385.1	D630037F22Rik	NP_001028557.1	ILMN_3162171	003180176	S	2170	CCCTCAGGATGTGGCATATTTTAGAGAAAGTTTTGTGGCTTGGGAGTTAG	10	-	55736751-55736800	10qB3	Mus musculus RIKEN cDNA D630037F22 gene (D630037F22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_202991	ILMN_311844	LOC100048615	XM_001480399.1	XM_001480399.1		100048615	149249659	XM_001480399.1	LOC100048615	XP_001480449.1	ILMN_1258225	006350398	S	2785	GATCCTCCACCAGGCCCAAGACAGGGCAAGGCTACAAACTGTGCTACTCC					PREDICTED: Mus musculus hypothetical protein LOC100048615 (LOC100048615), mRNA.					
Mus musculus	RefSeq	ILMN_234754	ILMN_234754	CEBPG	NM_009884.2	NM_009884.2		12611	62177114	NM_009884.2	Cebpg	NP_034014.1	ILMN_2972026	002480020	S	4058	GTGGGGCAGGAAGAGGCCATTTAGACGCTTTACTTTGGTCCTTTTAGTCT	7	-	35831972-35832021	7qB1	Mus musculus CCAAT/enhancer binding protein (C/EBP), gamma (Cebpg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [evidence IDA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6337] [evidence TAS]; The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors [goid 42267] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [evidence IMP]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA repair [goid 45739] [evidence ISS]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]; The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 1431100] [evidence IEP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]	Gpe1bp; C/EBP[g]; GPE1-BP; Ig/EBP; C/EBPgamma	Gpe1bp; C/EBP[g]; GPE1-BP; Ig/EBP; C/EBPgamma
Mus musculus	RefSeq	ILMN_197149	ILMN_197149	LOC226972	XM_136728.3	XM_136728.3			38074297	XM_136728.3	LOC226972		ILMN_2527089	000620477	S	940	TATGGAGCAGGACAAGGTGCAGTTCAGCCTGGAGATGCTTCTGGGCGGCA										
Mus musculus	MEEBO	ILMN_220221	ILMN_220221	4930521I23RIK	scl47688.6.1_286	XM_128031.1			20902942	XM_128031.1	4930521I23Rik		ILMN_1252097	004040743	S	1299	CAGTGTGAATTCTTGGTTAGCTGGATAAAGAAGGGACAGCGTCAGAGGGT										
Mus musculus	RefSeq	ILMN_215843	ILMN_215843	6330442E10RIK	NM_178745.3	NM_178745.3		268567	46048373	NM_178745.3	6330442E10Rik	NP_848860.1	ILMN_2834294	005270167	S	3628	GTATGAGGAAGGCCATGGGAGTGCCTTCCACCCTGAAGCCACCCTTACCT	12	-	80062969-80063018	12qC3	Mus musculus RIKEN cDNA 6330442E10 gene (6330442E10Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9830138K24; AU019070	9830138K24; AU019070
Mus musculus	RefSeq	ILMN_215843	ILMN_215843	6330442E10RIK	NM_178745.3	NM_178745.3		268567	46048373	NM_178745.3	6330442E10Rik	NP_848860.1	ILMN_1232627	004590612	S	2884	GCATTAAGGCTCCAATTCTCAACCAGAAAAGGCCATTGGGTGGCCCCTAG	12	-	80063713-80063762	12qC3	Mus musculus RIKEN cDNA 6330442E10 gene (6330442E10Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9830138K24; AU019070	9830138K24; AU019070
Mus musculus	RefSeq	ILMN_228286	ILMN_228286	LDB2	NM_001077398.1	NM_001077398.1		16826	116642890	NM_001077398.1	Ldb2	NP_001070866.1	ILMN_3112526	005560619	A	2017	CCCGGCCGCCTCCAATTTCCATTGGTTTCCATGTGGCAAGATCCCCGAGA	5	-	44863927-44863976	5qB3	Mus musculus LIM domain binding 2 (Ldb2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IEA]	CLP-36; AW146358; AI035351; CLIM1; Ldb3	CLP-36; AW146358; AI035351; CLIM1; Ldb3
Mus musculus	RefSeq	ILMN_198433	ILMN_235347	EG666648	XM_985182.1	XM_985182.1		666648	94378044	XM_985182.1	EG666648	XP_990276.1	ILMN_1239076	002810132	S	439	GGAGGCAGGCATCACCGCAGGATCAACTTTGACACATATCACCCAGGTTG	6	-	116145727-116145776	6qE3	PREDICTED: Mus musculus predicted gene, EG666648 (EG666648), mRNA.					
Mus musculus	RefSeq	ILMN_221254	ILMN_221254	LCN8	NM_033145.1	NM_033145.1		78076	14994307	NM_033145.1	Lcn8	NP_149157.1	ILMN_2733045	002690731	S	589	CCTGGCCTCTCCTGCTCCTGCCCGAAGAACCTCTGTATCTGCTCCAAATA	2	+	25511673-25511722	2qA3	Mus musculus lipocalin 8 (Lcn8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Lcn5; EP17; mEP17; 9230106L18Rik	Lcn5; EP17; mEP17; 9230106L18Rik
Mus musculus	MEEBO	ILMN_214395	ILMN_214395	C030016D13RIK	scl53244.1.35_33	NM_175354.2			31341695	NM_175354.2	C030016D13Rik		ILMN_1243696	004050327	S	2174	GATCCCTCCCCGACTGGCCATGCACTAGGCTACATGTTACTGATCCTGCC										
Mus musculus	RefSeq	ILMN_189083	ILMN_189083	UPP2	NM_029692.1	NM_029692.1		76654	27597064	NM_029692.1	Upp2	NP_083968.1	ILMN_2458184	006040400	S	4	GGTCGCCTAGATGGGGCGTTATGCTCCTTTTCGAGAGAGAAAAAGCTAGA	2	+	58570574-58570623	2qC1.1	Mus musculus uridine phosphorylase 2 (Upp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: uridine + phosphate = uracil + alpha-D-ribose 1-phosphate [goid 4850] [evidence ISS]	UPASE2; UDRPASE2; 1700124F02Rik; UP2; AI266885	UPASE2; UDRPASE2; 1700124F02Rik; UP2; AI266885
Mus musculus	Riken	ILMN_203770	ILMN_203770	A230052C13RIK	ri|A230052C13|PX00128D14|AK038641|2904					AK038641	A230052C13Rik		ILMN_1247813	002100148	S	2615	GTAGAGGACCCAGCTATACTACTCCTGGCCATATATCCAAAAGGTGCTCC										
Mus musculus	RefSeq	ILMN_223486	ILMN_223486	FGG	NM_133862.1	NM_133862.1		99571	19527077	NM_133862.1	Fgg	NP_598623.1	ILMN_2832105	001170280	S	1263	CTCCATCGGAGAAGGACAGCAGCATCACATGGGGGGATCCAAACAGGCTG	3	+	82818184-82818229:82818757-82818760	3qE3	Mus musculus fibrinogen, gamma polypeptide (Fgg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A highly soluble, elongated protein complex found in blood plasma and involved in clot formation. It is converted into fibrin monomer by the action of thrombin. In the mouse, fibrinogen is a hexamer, 46 nm long and 9 nm maximal diameter, containing two sets of nonidentical chains (alpha, beta, and gamma) linked together by disulfide bonds [goid 5577] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	AI256424; 3010002H13Rik	AI256424; 3010002H13Rik
Mus musculus	RefSeq	ILMN_212831	ILMN_212831	GPAA1	NM_010331.2	NM_010331.2		14731	31981728	NM_010331.2	Gpaa1	NP_034461.1	ILMN_1255423	000670242	S	1628	GTTGCATTGCTCTCCTCAATTTCTCCCTGGGCTTCCTGCTGGCTGCCACC	15	+	76164800-76164849	15qD3	Mus musculus GPI anchor attachment protein 1 (Gpaa1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor [goid 42765] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISS]	Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor [goid 3923] [evidence TAS]	mGAA1; C80044	mGAA1; C80044
Mus musculus	RefSeq	ILMN_261897	ILMN_261897	F2RL1	NM_007974.2	NM_007974.2		14063	31982849	NM_007974.2	F2rl1	NP_032000.2	ILMN_2866267	001410348	S	2374	GTCAGTTTTCCCTCATCCTCGATCATAGTCCTTCCCATGAAGCAGGGCCC	13	-	96612745-96612794	13qD1	Mus musculus coagulation factor II (thrombin) receptor-like 1 (F2rl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with thrombin to initiate a change in cell activity [goid 15057] [evidence IEA]	PAR-2; Par2; Gpcr11	PAR-2; Par2; Gpcr11
Mus musculus	RefSeq	ILMN_218104	ILMN_218104	SAC3D1	NM_133678.3	NM_133678.3		66406	119508434	NM_133678.3	Sac3d1	NP_598439.3	ILMN_2691706	003170523	S	854	TTCAGGCGGCGTTGGCTGTTGACGCTGCCTTCCGGGAAGACAACCATGCC	19	-	6116474-6116523	19qA	Mus musculus SAC3 domain containing 1 (Sac3d1), mRNA.	The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart [goid 51225] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51298] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU015683; shd1; 2410004C24Rik	AU015683; shd1; 2410004C24Rik
Mus musculus	RefSeq	ILMN_232331	ILMN_232331	IQGAP2	NM_027711.1	NM_027711.1		544963	118344443	NM_027711.1	Iqgap2	NP_081987.1	ILMN_2908846	006130014	S	5565	CTGCCTCATGGGAAGGCTCCTGTATGGGAGTCACAGGAAACACGGTGGAC	13	-	96397288-96397337	13qD1	Mus musculus IQ motif containing GTPase activating protein 2 (Iqgap2), mRNA.				A630053O10; 4933417J23Rik	A630053O10; 4933417J23Rik
Mus musculus	RefSeq	ILMN_185473	ILMN_232331	IQGAP2	NM_027711.1	NM_027711.1		544963	118344443	NM_027711.1	Iqgap2	NP_081987.1	ILMN_2427307	006290349	S	3223	CCTGTGGAGGTGTACAAGGCTTGGGTGAACCAACTGGAAACGCAGACTGG	13	-	96434026-96434075	13qD1	Mus musculus IQ motif containing GTPase activating protein 2 (Iqgap2), mRNA.				A630053O10; 4933417J23Rik	A630053O10; 4933417J23Rik
Mus musculus	RefSeq	ILMN_206666	ILMN_232331	IQGAP2	NM_027711.1	NM_027711.1		544963	118344443	NM_027711.1	Iqgap2	NP_081987.1	ILMN_1218051	002060142	S	926	GAAACCCCAACGCAGTGTTAACTTGTGTGGACGACAGCCTCTCACAGGAG	13	-	96501291-96501340	13qD1	Mus musculus IQ motif containing GTPase activating protein 2 (Iqgap2), mRNA.				A630053O10; 4933417J23Rik	A630053O10; 4933417J23Rik
Mus musculus	RefSeq	ILMN_197363	ILMN_197363	LOC277343	XM_204940.2	XM_204940.2			38075346	XM_204940.2	LOC277343		ILMN_2527873	003990291	S	472	AGTGGATGCCGTGGGAATGCGAACAACTTCCTCACCAAGACTGACTGTAG										
Mus musculus	Riken	ILMN_206603	ILMN_206603	LCN7	ri|E030029M14|PX00205O04|AK087142|2086					AK087142	Lcn7		ILMN_1256289	000150343	S	1880	GGGTGCCACATAAAAGGACTGCTTCCCATGATCGCCCCAGTTGGCTCTCT										
Mus musculus	RefSeq	ILMN_214729	ILMN_214729	METTL6	NM_025907.3	NM_025907.3		67011	118129886	NM_025907.3	Mettl6	NP_080183.1	ILMN_1214843	001340598	S	823	GCTGGAAGCAAACTTGGAGAAAATTTTTATGTCAGGCAAGATGGAACCAG	14	-	32295996-32296045	14qB	Mus musculus methyltransferase like 6 (Mettl6), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AI467521; AU020711; 1600013P15Rik	AI467521; AU020711; 1600013P15Rik
Mus musculus	RefSeq	ILMN_214729	ILMN_214729	METTL6	NM_025907.3	NM_025907.3		67011	118129886	NM_025907.3	Mettl6	NP_080183.1	ILMN_2686187	002470402	S	1772	CAAAGGGAAGCATGGGAGCCGACAAGAGATACATGAACAGGTCGCAGGTC	14	-	32292067-32292116	14qB	Mus musculus methyltransferase like 6 (Mettl6), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AI467521; AU020711; 1600013P15Rik	AI467521; AU020711; 1600013P15Rik
Mus musculus	Riken	ILMN_201888	ILMN_201888	4931433E08RIK	ri|4931433E08|PX00016P16|AK016504|1832					AK016504	4931433E08Rik		ILMN_2545383	002510563	S	1501	CTTATAGATCCACAGGTGGTGTCTCGGGACCAGCCAACTTCAGGAGGGAG										
Mus musculus	MEEBO	ILMN_209436	ILMN_209436	4930435M08RIK	scl45968.2.1_149	XM_147874.1			20881906	XM_147874.1	4930435M08Rik		ILMN_1234534	006350445	S	1450	CCTGTGGAGAGCAAAAGGGAAAAAGTTGACATCTCTAGCAGTTGGGGTAC										
Mus musculus	RefSeq	ILMN_215132	ILMN_310611	LOC100043040	XM_001480016.1	XM_001480016.1		100043040	149262826	XM_001480016.1	LOC100043040	XP_001480066.1	ILMN_1228015	003140725	S	421	GCTCTGGAAACTTAAAGAGCCCGACGATCAAGTGATCTTGCCAACTACCG	12	-	3426541-3426590	12qA1.1	PREDICTED: Mus musculus hypothetical protein LOC100043040 (LOC100043040), mRNA.					
Mus musculus	RefSeq	ILMN_217313	ILMN_311021	4933415F23RIK	NM_025746.2	NM_025746.2		66755	145587106	NM_025746.2	4933415F23Rik	NP_080022.2	ILMN_2681759	003830221	S	1341	GGACCTGTGCTCAAGCCAGGATATCGTCCCAGGCTTGCTGGAGTTAGTAA				1qA5	Mus musculus RIKEN cDNA 4933415F23 gene (4933415F23Rik), mRNA.					
Mus musculus	Riken	ILMN_206340	ILMN_206340	D330016H05RIK	ri|D330016H05|PX00192K01|AK084574|2219					AK084574	D330016H05Rik		ILMN_1244227	005490110	S	443	GCAGGAAGGCAAGAGAGAGGCACTCGGAACCCTGAATCTCATTGAACACC										
Mus musculus	RefSeq	ILMN_189575	ILMN_242258	ZFP217	NM_001033299.2	NM_001033299.2		228913	142363009	NM_001033299.2	Zfp217	NP_001028471.1	ILMN_1233739	005260736	S	3823	CCTTTGTACCAAATAGCAATAAAAACGAGTGGGAGCCGTTGGGCGGTGCG	2	-	169935955-169936004	2qH3	Mus musculus zinc finger protein 217 (Zfp217), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ZABC1; Znf217; AW987152; Gm562; 4933431C08Rik	ZABC1; Znf217; AW987152; Gm562; 4933431C08Rik
Mus musculus	RefSeq	ILMN_187931	ILMN_246200	PBX1	NM_008783.1	NM_008783.1		18514	7110680	NM_008783.1	Pbx1	NP_032809.1	ILMN_1256907	006520722	S	2843	CGCCTGTAGATCTCCTTCCAGTTTTACTCAAGTTACCCACTAGCTAGGGC	1	-	169956802-169956851	1qH2.3	Mus musculus pre B-cell leukemia transcription factor 1 (Pbx1), transcript variant b, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	D230003C07Rik; Pbx-1	D230003C07Rik; Pbx-1
Mus musculus	RefSeq	ILMN_215969	ILMN_215969	OLFR351	NM_146942.1	NM_146942.1		258944	22129024	NM_146942.1	Olfr351	NP_667153.1	ILMN_2665824	004180356	S	596	CCTTAGGGGGTACAGTACTCATGGTCCCTTTTGTATGCATTGTTATCTCG	2	-	36715221-36715270	2qB	Mus musculus olfactory receptor 351 (Olfr351), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR127-2	MOR127-2
Mus musculus	RefSeq	ILMN_215119	ILMN_215119	MRPS34	NM_023260.1	NM_023260.1		79044	13385669	NM_023260.1	Mrps34	NP_075749.1	ILMN_2655774	002030315	S	846	GCTTGGTGTCATTTTCAGGCGGGCCCCTCTCTGATTCCTCGGTCTGGAAA	17	+	25032625-25032674	17qA3.3	Mus musculus mitochondrial ribosomal protein S34 (Mrps34), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AV001970; 5330430D13Rik; Tce2; 0610007F04Rik	AV001970; 5330430D13Rik; Tce2; 0610007F04Rik
Mus musculus	RefSeq	ILMN_197167	ILMN_197167	LOC381345	XM_355308.1	XM_355308.1			38074394	XM_355308.1	LOC381345		ILMN_2527156	006130497	S	233	GGCCTTGTTTTTCTTATGCTATTGGGAAGCCAGGAGACCTAGGCCAACCA										
Mus musculus	RefSeq	ILMN_210983	ILMN_210983	DGCR6	NM_010047.3	NM_010047.3		13353	145966785	NM_010047.3	Dgcr6	NP_034177.1	ILMN_2611284	003370192	S	740	GCAGAGCACACTGGAGAAGGCAGGGGTAGCTGGTTTCTACGTGACCACCA				16qA3	Mus musculus DiGeorge syndrome critical region gene 6 (Dgcr6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU044152	AU044152
Mus musculus	Riken	ILMN_204503	ILMN_204503	B230325M24RIK	ri|B230325M24|PX00160E05|AK045946|1571					AK045946	B230325M24Rik		ILMN_2565481	004180332	S	1431	AGGATCATCTGACGGACCTACCATTTCCCAAGCTATCCTGCTTTACCTCC										
Mus musculus	RefSeq	ILMN_188810	ILMN_226501	2210408F21RIK	XM_895387.2	XM_895387.2		73652	94377249	XM_895387.2	2210408F21Rik	XP_900480.2	ILMN_2455904	005910348	S	401	CCTCGTCTACGGCCAAACGTTGGTTTCTCATTTCTAGAAGATGAAAGATG	6	+	31266159-31266208		PREDICTED: Mus musculus RIKEN cDNA 2210408F21 gene, transcript variant 6 (2210408F21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212384	ILMN_256121	1700019N12RIK	NM_001039494.2	NM_001039494.2		67077	142373966	NM_001039494.2	1700019N12Rik	NP_001034583.1	ILMN_2625819	004480446	S	341	ACTGTGCCATGGCAGGTCCTTGGAGCATGGGGAGGACCACGAAGAATCTG	19	-	6999295-6999344	19qA	Mus musculus RIKEN cDNA 1700019N12 gene (1700019N12Rik), mRNA.				A430107B04Rik	A430107B04Rik
Mus musculus	RefSeq	ILMN_212384	ILMN_256121	1700019N12RIK	NM_001039494.2	NM_001039494.2		67077	142373966	NM_001039494.2	1700019N12Rik	NP_001034583.1	ILMN_1258349	004180040	S	676	GACGAGACGTCCGCTCCGTGTCCTTTCCGGTCCCTCGAACCCAAGCTCAA	19	-	6996971-6997020	19qA	Mus musculus RIKEN cDNA 1700019N12 gene (1700019N12Rik), mRNA.				A430107B04Rik	A430107B04Rik
Mus musculus	RefSeq	ILMN_212045	ILMN_212045	GTPBP3	NM_032544.3	NM_032544.3		70359	118130758	NM_032544.3	Gtpbp3	NP_115933.2	ILMN_1258042	004060494	S	2280	GACATGGATCAGGGATCTGACAGTGGATACTTCCTCACCCCCGATGTCGG	8	+	74016779-74016828	8qB3.3	Mus musculus GTP binding protein 3 (Gtpbp3), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically [goid 6400] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	MGC102372; 2410009F13Rik	MGC102372; 2410009F13Rik
Mus musculus	RefSeq	ILMN_199602	ILMN_199602	LOC383727	XM_357208.1	XM_357208.1			38074945	XM_357208.1	LOC383727		ILMN_1257459	003890133	S	267	GCAGGCTGAGGAGAATCTCGGCATGGCCAAATTTGATACAGAACTCCTGG										
Mus musculus	Riken	ILMN_202973	ILMN_202973	A430031F07RIK	ri|A430031F07|PX00135G21|AK039925|663					AK039925	A430031F07Rik		ILMN_1230770	000770136	S	27	GGCTTGTATGGCAAAGATTTTTTTACCAGCTGAGCCATCTTCCCGGTCCC										
Mus musculus	RefSeq	ILMN_209428	ILMN_209428	ASCC3	XM_125617.7	XM_125617.7		77987	94387974	XM_125617.7	Ascc3	XP_125617.5	ILMN_1248187	003360152	S	6747	CCCTGTATCTCATGAGTGACTGTTACCTCGGCCTAGACCAGCAGTATGAC	10	+	50570278-50570327	10qB3	PREDICTED: Mus musculus activating signal cointegrator 1 complex subunit 3, transcript variant 1 (Ascc3), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209428	ILMN_209428	ASCC3	XM_125617.7	XM_125617.7		77987	94387974	XM_125617.7	Ascc3	XP_125617.5	ILMN_2664365	004060369	S	1196	AGTTGTAAAAAGATTTTAGGAGAGAATTCAAAGCCTAATTATGGATGTCA	10	+	50362331-50362380	10qB3	PREDICTED: Mus musculus activating signal cointegrator 1 complex subunit 3, transcript variant 1 (Ascc3), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215445	ILMN_215445	LENG1	NM_027203.3	NM_027203.3		69757	118130331	NM_027203.3	Leng1	NP_081479.1	ILMN_1234337	006370343	S	1813	GGCCTAAGGTTATTAAGTGACACTGAGGAGTAGGGACCAACAGGTGGCCT	7	-	3612059-3612108	7qA1	Mus musculus leukocyte receptor cluster (LRC) member 1 (Leng1), mRNA.				1500001K17Rik	1500001K17Rik
Mus musculus	RefSeq	ILMN_206913	ILMN_331271	LOC100042011	XM_001477857.1	XM_001477857.1		100042011	149258898	XM_001477857.1	LOC100042011	XP_001477907.1	ILMN_1218648	005690070	S	228	CCGGGGAAGAGAAGTGGGAAAGGGGAGAGACTGGGGAGATGGTTGAGGAT	8	-	73389050-73389099	8qB3.3	PREDICTED: Mus musculus hypothetical protein LOC100042011 (LOC100042011), mRNA.					
Mus musculus	Riken	ILMN_202169	ILMN_202169	3110033D18RIK	ri|3110033D18|ZX00071P03|AK014118|1900					AK014118	3110033D18Rik		ILMN_1244904	003180634	S	1761	CGAGAAAGAAGGGTCGGGCGGATGGCGCAAAGGTTATTGGTGGCTTGGTG										
Mus musculus	RefSeq	ILMN_211075	ILMN_211075	ABCA9	NM_147220.1	NM_147220.1		217262	22267465	NM_147220.1	Abca9	NP_671753.1	ILMN_2699880	003190670	S	4551	CATCCTGGGGAACCCTCCTGTGGTACTTCTGGATGAGCCATCGACTGGGA	11	-	109969994-109970043	11qE1	Mus musculus ATP-binding cassette transporter sub-family A member 9 (Abca9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	D630040K07Rik	D630040K07Rik
Mus musculus	RefSeq	ILMN_192700	ILMN_247977	INADL	NM_172696.2	NM_172696.2		12695	55769577	NM_172696.2	Inadl	NP_766284.2	ILMN_2490495	004230673	S	6758	CCGTAGAGTCGTCTGTTGAAAGCAAAGGAAACTACCACGAAGGGTCAGCA	4	+	98385747-98385796	4qC6	Mus musculus InaD-like (Drosophila) (Inadl), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RP23-291M22.2; Cipp; Patj	RP23-291M22.2; Cipp; Patj
Mus musculus	RefSeq	ILMN_219418	ILMN_247977	INADL	NM_172696.2	NM_172696.2		12695	55769577	NM_172696.2	Inadl	NP_766284.2	ILMN_2708580	006770138	S	5524	AAGTGCCATAGCGACCCAGCTGGAAATCATGTCTGCAGGCTCCCAGCTTG	4	+	98370706-98370755	4qC6	Mus musculus InaD-like (Drosophila) (Inadl), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RP23-291M22.2; Cipp; Patj	RP23-291M22.2; Cipp; Patj
Mus musculus	RefSeq	ILMN_192700	ILMN_247977	INADL	NM_172696.2	NM_172696.2		12695	55769577	NM_172696.2	Inadl	NP_766284.2	ILMN_2705732	001940180	S	3758	CCGCCCTACAGAGCTCCATCTGCAGACATGGAGGGAAGTGAAGAAGACTG	4	+	98205686-98205735	4qC6	Mus musculus InaD-like (Drosophila) (Inadl), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RP23-291M22.2; Cipp; Patj	RP23-291M22.2; Cipp; Patj
Mus musculus	RefSeq	ILMN_221319	ILMN_221319	PDE10A	NM_011866.2	NM_011866.2		23984	70909346	NM_011866.2	Pde10a	NP_035996.2	ILMN_2733915	000620598	S	3223	GGTGCACTACAGGTATGCTCTTTCAGTCTATCTGGGGGCACATAGGTGAG	17	+	9175019-9175068	17qA1	Mus musculus phosphodiesterase 10A (Pde10a), mRNA.			Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IDA]		
Mus musculus	RefSeq	ILMN_186402	ILMN_225990	ZBTB46	NM_028125.2	NM_028125.2		72147	142349378	NM_028125.2	Zbtb46	NP_082401.1	ILMN_2619179	006960639	S	2396	TGGTGACTGGTCATCCTCCGGACCGCTGAATTACAGGACCGTTTCCAGCC	2	-	181145381-181145430	2qH4	Mus musculus zinc finger and BTB domain containing 46 (Zbtb46), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4933406L05Rik; Btbd4; 2610019F01Rik	4933406L05Rik; Btbd4; 2610019F01Rik
Mus musculus	MEEBO	ILMN_193051	ILMN_193051	E130201H02RIK	scl32120.1_1				51762116	XM_488078	E130201H02Rik		ILMN_1242223	004150576	S	1	TGCGGGTGCTTCTTCACAACATAATCTGCTTATTGTGAACTTGGTCTTTT										
Mus musculus	RefSeq	ILMN_222448	ILMN_323681	4930515G01RIK	XR_035133.1	XR_035133.1		67642	149254529	XR_035133.1	4930515G01Rik		ILMN_2749719	004610632	S	1132	GCGTGGCAACTATCAATCACATTAAACAGGACCCGTGCTTCTAAGGCCTC	5	-	115223811-115223860	5qF	PREDICTED: Mus musculus RIKEN cDNA 4930515G01 gene (4930515G01Rik), misc RNA.					
Mus musculus	Riken	ILMN_204931	ILMN_204931	CACNA2D1	ri|D130092I18|PX00187C22|AK084101|2343					AK084101	Cacna2d1		ILMN_2568719	007650202	S	1436	CCCACATGGGTACTGTGAGCCCTTCCACACACAGGCACCTTTGGGACATC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_203722	ILMN_203722	TST	ri|9830004K05|PX00117N13|AK036393|2631					AK036393	Tst		ILMN_2559480	004200360	S	2425	CAGATACAAAGCATGGGATGTGGGGGGTGGGGAGGCCTTGACTGGGTGTT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [evidence IEA]		
Mus musculus	RefSeq	ILMN_254557	ILMN_254557	E130309D14RIK	NM_001013784.1	NM_001013784.1		432582	62000657	NM_001013784.1	E130309D14Rik	NP_001013806.1	ILMN_3161884	001110075	S	3665	CTGGGGCCAAGATGGGGAAGCCCATCCCTATACAAGCAGCAGGATAGAGT	11	+	74454681-74454730	11qB5	Mus musculus RIKEN cDNA E130309D14 gene (E130309D14Rik), mRNA.					
Mus musculus	Riken	ILMN_203951	ILMN_203951	A430087M16RIK	ri|A430087M16|PX00138F21|AK040336|2444					AK040336	A430087M16Rik		ILMN_1225670	002680114	S	2297	GCTCAGCATTTAGGCAGCAACAAGTAGGGGAGGAGGTGGGGCCTGTTAGC										
Mus musculus	Riken	ILMN_207048	ILMN_207048	B430303F05RIK	ri|B430303F05|PX00072C23|AK080967|4123					AK080967	B430303F05Rik		ILMN_2584645	005080400	S	3553	ATTTTTCCAGTGCTGGGGGCTGAACCCAGGGACTTGGGCTTGCTAGGCAA										
Mus musculus	Riken	ILMN_202664	ILMN_202664	A430106H13RIK	ri|A430106H13|PX00064G20|AK020775|1059					AK020775	A430106H13Rik		ILMN_2551339	005560762	S	956	GCCAGGATGGCCTTGAACTTTTCTTTGCTTGCCTCAGCCTTTCGAGTGGC										
Mus musculus	RefSeq	ILMN_198221	ILMN_198221	LOC240172	XM_140175.2	XM_140175.2			38082954	XM_140175.2	LOC240172		ILMN_1229360	002480392	S	159	CACCTGTTATGCTGTAGACCTTACTGACAAGGAGGGGATGGGTCCAGCGG										
Mus musculus	RefSeq	ILMN_217833	ILMN_217833	INPP1	NM_008384.1	NM_008384.1		16329	6680456	NM_008384.1	Inpp1	NP_032410.1	ILMN_2901801	004120500	S	1161	GGGGCATTGTAGACATGAAAGAGTGCTTAGAGAGAAGTCCAGACACGGGG	1	-	52846676-52846725	1qC1.1	Mus musculus inositol polyphosphate-1-phosphatase (Inpp1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: 1D-myo-inositol 1,4-bisphosphate + H2O = 1D-myo-inositol 4-phosphate + phosphate [goid 4441] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]	AV137389	AV137389
Mus musculus	RefSeq	ILMN_214418	ILMN_214418	TMEM168	NM_028990.2	NM_028990.2		101118	31542031	NM_028990.2	Tmem168	NP_083266.1	ILMN_2964473	005720196	S	4202	GGTCCACAATTAAATAAGGAAACTAGCGTTGAGATGTTACCTTGCTGTGC	6	-	13530985-13531034	6qA1	Mus musculus transmembrane protein 168 (Tmem168), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI504145; 5730526F17Rik; AI462344; 8430437G11Rik	AI504145; 5730526F17Rik; AI462344; 8430437G11Rik
Mus musculus	RefSeq	ILMN_222639	ILMN_227206	NBL1	NM_008675.2	NM_008675.2		17965	148234600	NM_008675.2	Nbl1	NP_032701.2	ILMN_2777478	000670661	S	1385	GGAAGTAGCTGCAGCCAGCCCTGCTGTCTTTGGGGCCGGTCTTTCTGAAA				4qD3	Mus musculus neuroblastoma, suppression of tumorigenicity 1 (Nbl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		Dana; D4H1S1733E; NO3; MGC123430; DAN	Dana; D4H1S1733E; NO3; MGC123430; DAN
Mus musculus	RefSeq	ILMN_214426	ILMN_214426	OLFR732	NM_146665.1	NM_146665.1		258659	33239003	NM_146665.1	Olfr732	NP_666876.1	ILMN_1249771	007610370	S	398	CTACTGTTATGAGCCCTAGAGCCTGCTATGTGATGTTGTTGGCTCTCTGG	14	-	50901479-50901528	14qC1	Mus musculus olfactory receptor 732 (Olfr732), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR241-1	MOR241-1
Mus musculus	RefSeq	ILMN_214426	ILMN_214426	OLFR732	NM_146665.1	NM_146665.1		258659	33239003	NM_146665.1	Olfr732	NP_666876.1	ILMN_2647909	000360520	S	407	GAGCCCTAGAGCCTGCTATGTGATGTTGTTGGCTCTCTGGCTTGGAGGAT	14	-	50901470-50901519	14qC1	Mus musculus olfactory receptor 732 (Olfr732), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR241-1	MOR241-1
Mus musculus	Riken	ILMN_201742	ILMN_201742	FGF12	ri|2610037J04|ZX00045I20|AK011712|1189					AK011712	Fgf12		ILMN_1229525	000160634	S	315	AAGGAGTGCATATGCTGCAGTGCCTCTGTGGAAGGAGCCTGAGGTCCAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216110	ILMN_216110	HCRTR1	NM_198959.1	NM_198959.1		230777	39930592	NM_198959.1	Hcrtr1	NP_945197.1	ILMN_3136269	007000240	A	1517	TCTCTGAGCATGTCGTGCTGACCACCGTCACTACCGTGCTGTCCTGAGTG	4	-	129808081-129808084:129808085-129808130	4qD2.2	Mus musculus hypocretin (orexin) receptor 1 (Hcrtr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with orexin to initiate a change in cell activity [goid 16499] [evidence IEA]	MGC141357; Ox1r	MGC141357; Ox1r
Mus musculus	RefSeq	ILMN_216110	ILMN_216110	HCRTR1	NM_198959.1	NM_198959.1		230777	39930592	NM_198959.1	Hcrtr1	NP_945197.1	ILMN_3059046	001230450	I	638	CCGAGTCGTGGCTCTTCGGCCAGGCTTTGTGCAAGGTCATTCCCTATCTC	4	-	129814358-129814407	4qD2.2	Mus musculus hypocretin (orexin) receptor 1 (Hcrtr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with orexin to initiate a change in cell activity [goid 16499] [evidence IEA]	MGC141357; Ox1r	MGC141357; Ox1r
Mus musculus	RefSeq	ILMN_246401	ILMN_246401	ALDH5A1	NM_172532.1	NM_172532.1		214579	27369747	NM_172532.1	Aldh5a1	NP_766120.1	ILMN_2870161	006770360	S	1875	CTGAGACCCCAGCACAACCCCACTGCCTCAGGACAAGGTACAGAGTGAAT	13	-	24918766-24918815	13qA3.1	Mus musculus aldhehyde dehydrogenase family 5, subfamily A1 (Aldh5a1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue [goid 6650] [evidence IMP]; The chemical reactions and pathways involving fatty acids with a chain length of less than 8 carbons [goid 46459] [evidence IMP]; The chemical reactions and pathways involving galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6681] [evidence IMP]; The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative [goid 6678] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; The chemical reactions and pathways involving acetate, the anion of acetic acid [goid 6083] [evidence IMP]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [evidence IMP]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IMP]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle [goid 6105] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IMP]; The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9448] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9450] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP [goid 16620] [evidence IEA]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [evidence IEA]	Ssdh1; 6330403E24Rik; D630032B01Rik; Ahd-1; Ahd1	Ssdh1; 6330403E24Rik; D630032B01Rik; Ahd-1; Ahd1
Mus musculus	RefSeq	ILMN_251206	ILMN_251206	LMTK3	NM_001005511.1	NM_001005511.1		381983	53828724	NM_001005511.1	Lmtk3	NP_001005511.1	ILMN_2957555	006040132	S	4312	AGGAGATGGGTTTCCCAACAGCGACAGCGGCTTTGGCGGCAGTTTCGAGT	7	+	53055907-53055941:53056282-53056296	7qB4	Mus musculus lemur tyrosine kinase 3 (Lmtk3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC90743; BC059845	MGC90743; BC059845
Mus musculus	MEEBO	ILMN_195239	ILMN_195239	SCL000959.1_2	scl000959.1_2	BC059087.1			37589524	BC059087.1	scl000959.1_2		ILMN_1216602	001190121	S	17	CCTTCAGTTTATCCTCCAGCTCCACTGCTGTTTCGCAGCCTAGAACTCCA										
Mus musculus	RefSeq	ILMN_213959	ILMN_213959	FGF5	NM_010203.4	NM_010203.4		14176	145966820	NM_010203.4	Fgf5	NP_034333.1	ILMN_2642743	001510075	S	2284	CCCTTGCGACCCAGGAGCTTAATTCGGGAATGTGATGAGCTGAAAATGAC				5qE3	Mus musculus fibroblast growth factor 5 (Fgf5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	angora; go; Fgf-5	angora; go; Fgf-5
Mus musculus	RefSeq	ILMN_210468	ILMN_316852	LOC100047863	XM_001479335.1	XM_001479335.1		100047863	149254424	XM_001479335.1	LOC100047863	XP_001479385.1	ILMN_2605917	005810364	S	2193	GCCACAGGCGATGGATGCTTCATGATCCTGCTCCTACTCTTAGCTTTACG					PREDICTED: Mus musculus similar to lymphocyte-specific adaptor protein Lnk (LOC100047863), mRNA.					
Mus musculus	RefSeq	ILMN_196987	ILMN_196987	LOC268569	XM_195821.2	XM_195821.2			38050556	XM_195821.2	LOC268569		ILMN_1232116	001230681	S	61	TCGCAGCGAGCCGGCTTGTAGTTCCCTTTGGGCTGTATTCATCGACACCT										
Mus musculus	RefSeq	ILMN_196734	ILMN_196734	HIST2H2AB	NM_178213.3	NM_178213.3		621893	119433656	NM_178213.3	Hist2h2ab	NP_835585.3	ILMN_2785454	000110039	S	227	AGACGCGCATCATCCCGCGCCATCTGCAACTAGCTGTGAGGAACGATGAG	3	+	96024065-96024114	3qF2.1	Mus musculus histone cluster 2, H2ab (Hist2h2ab), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2a-613a; EG621893	H2a-613a; EG621893
Mus musculus	MEEBO	ILMN_224167	ILMN_224167	CALM2	scl012314.1_140				46518512	NM_007589	Calm2		ILMN_2775885	005870253	S	886	GCGTGGACTGTGGACAGTCAACAATATGTACTTAAAAGTTGCACTATTGC							The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]		
Mus musculus	Riken	ILMN_202971	ILMN_202971	ITK	ri|A430017C14|PX00134O01|AK079693|1171					AK079693	Itk		ILMN_1217899	005820020	S	911	CCACCCGATTCCATCTCCTTTGTATTAAAGGCTGATAAGCCGGGGCCACC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197002	ILMN_197002	LOC240750	XM_136222.3	XM_136222.3			38073359	XM_136222.3	LOC240750		ILMN_1231425	003290397	S	6	ACAGTGTCGGGAGCATGTCATCTATCAGTCAGCAGCAGGGTTTCCCAAAC										
Mus musculus	RefSeq	ILMN_216840	ILMN_216840	MED31	NM_026068.2	NM_026068.2		67279	56119161	NM_026068.2	Med31	NP_080344.2	ILMN_1217567	002680725	S	982	TAACACAGCAGGGAAATGAAGAGCTGGGGCCAGGTCAGGCTCTTAGGACG	11	-	72025355-72025386:72025387-72025404	11qB4	Mus musculus mediator of RNA polymerase II transcription, subunit 31 homolog (yeast) (Med31), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [evidence IEA]	RP23-207N15.5; CGI-125; 3110004H13Rik	RP23-207N15.5; CGI-125; 3110004H13Rik
Mus musculus	RefSeq	ILMN_185360	ILMN_257018	AGFG1	NM_010472.2	NM_010472.2		15463	142387721	NM_010472.2	Agfg1	NP_034602.1	ILMN_1231146	003780463	S	2935	GACTGTGACATGGTTGCACCTGAGGTTCCCCCCTCACTTTCTGGACAGAC	1	+	82892648-82892697	1qC5	Mus musculus ArfGAP with FG repeats 1 (Agfg1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]; The formation of the acrosome from the spermatid Golgi [goid 1675] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	C130049H11Rik; Rip; RAB; AU045498; D730048C23Rik; C85612	C130049H11Rik; Rip; RAB; AU045498; D730048C23Rik; C85612
Mus musculus	RefSeq	ILMN_185360	ILMN_257018	AGFG1	NM_010472.2	NM_010472.2		15463	142387721	NM_010472.2	Agfg1	NP_034602.1	ILMN_2606072	001090398	S	980	GACAGTCTAGTGGTTCGAGTAATTTTGGAGGTTTCCCCACAGCAAGTCAC	1	+	82876628-82876677	1qC5	Mus musculus ArfGAP with FG repeats 1 (Agfg1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]; The formation of the acrosome from the spermatid Golgi [goid 1675] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	C130049H11Rik; Rip; RAB; AU045498; D730048C23Rik; C85612	C130049H11Rik; Rip; RAB; AU045498; D730048C23Rik; C85612
Mus musculus	RefSeq	ILMN_186121	ILMN_325761	LOC100046343	XM_001475830.1	XM_001475830.1		100046343	149262083	XM_001475830.1	LOC100046343	XP_001475880.1	ILMN_1230976	006250152	S	1785	GGGTATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCAG					PREDICTED: Mus musculus similar to CCR4-NOT transcription complex, subunit 6 (LOC100046343), mRNA.					
Mus musculus	RefSeq	ILMN_196546	ILMN_325761	LOC100046343	XM_001475830.1	XM_001475830.1		100046343	149262083	XM_001475830.1	LOC100046343	XP_001475880.1	ILMN_1237233	001300687	S	1503	GGGACCTCTGGATCACCATTGGCTAGTCGAGAATAACATCAGCGGCTGCC					PREDICTED: Mus musculus similar to CCR4-NOT transcription complex, subunit 6 (LOC100046343), mRNA.					
Mus musculus	RefSeq	ILMN_186121	ILMN_325761	LOC100046343	XM_001475830.1	XM_001475830.1		100046343	149262083	XM_001475830.1	LOC100046343	XP_001475880.1	ILMN_1253625	004890438	S	5285	CTCTTTTCCTTACCGATGTATTTTCCTACTCATAGCCAACCAATAAATTC					PREDICTED: Mus musculus similar to CCR4-NOT transcription complex, subunit 6 (LOC100046343), mRNA.					
Mus musculus	Riken	ILMN_205119	ILMN_205119	E130309K17RIK	ri|E130309K17|PX00208J02|AK053806|2145					AK053806	E130309K17Rik		ILMN_1248622	000290528	S	1746	GTCCAGACCCAGCCAGAACCTTTCCAATCATCAACCACAAGCAAATCAGC										
Mus musculus	RefSeq	ILMN_189908	ILMN_189908	TTBK2	NM_080788.3	NM_080788.3		140810	114326518	NM_080788.3	Ttbk2	NP_542966.2	ILMN_3058376	003870154	I	49	GCAATGGGACTAGCCAACCGACGCCACAGGCTGGGAACGTGCTCTCCAAT	2	-	120676222-120676269:120676270-120676271	2qE5	Mus musculus tau tubulin kinase 2 (Ttbk2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	Ttbk1; KIAA0847; 2610507N02Rik; TTK; AI326283; mKIAA0847; Ttbk; B930008N24Rik	Ttbk1; KIAA0847; 2610507N02Rik; TTK; AI326283; mKIAA0847; Ttbk; B930008N24Rik
Mus musculus	RefSeq	ILMN_190183	ILMN_245237	CD8B1	NM_009858.2	NM_009858.2		12526	118129874	NM_009858.2	Cd8b1	NP_033988.1	ILMN_2664929	001710102	S	1107	GTTTCAGGGCTCTCAGCAGCCATCTTACTCTCTCAGGCCTTGCCGTGGGT	6	+	71287136-71287185	6qC1	Mus musculus CD8 antigen, beta chain 1 (Cd8b1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	Cd8b; Ly-3; Lyt-3; Ly-C	Cd8b; Ly-3; Lyt-3; Ly-C
Mus musculus	RefSeq	ILMN_190183	ILMN_245237	CD8B1	NM_009858.2	NM_009858.2		12526	118129874	NM_009858.2	Cd8b1	NP_033988.1	ILMN_2741169	001690079	S	1032	CTAGCCGGGACCCTGGAGAAGACTGCAAATCCTCACACAGAGAAGCCACC	6	+	71287061-71287110	6qC1	Mus musculus CD8 antigen, beta chain 1 (Cd8b1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	Cd8b; Ly-3; Lyt-3; Ly-C	Cd8b; Ly-3; Lyt-3; Ly-C
Mus musculus	RefSeq	ILMN_200615	ILMN_200615	LOC383401	XM_357028.1	XM_357028.1			38084297	XM_357028.1	LOC383401		ILMN_1218801	005080743	S	353	CCACGTGTGGAGGAGCTGTTGTCTCTCCTGTTTCTGCTGTGACTGCTCTC										
Mus musculus	MEEBO	ILMN_221563	ILMN_221563	MXI1	scl52962.1.240_4	XM_357080.1			38085399	XM_357080.1	Mxi1		ILMN_2737256	002370161	S	130	AGCACATCAACACTTTTCTGCAGAACGTGCAGATTCTGCTCGAGGCAGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_203853	ILMN_230363	BAT2D	NM_001081290.1	NM_001081290.1		226562	124486834	NM_001081290.1	Bat2d	NP_001074759.1	ILMN_1221890	006510682	S	5524	CATTTTGGCATCAGCCACCGCTCTAGTTCCAGTGTCAACCCCAGCTCCGG	1	-	164628157-164628206	1qH2.1	Mus musculus BAT2 domain containing 1 (Bat2d), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810043M20Rik; E130112L15Rik; Bat2d1; mKIAA1096; A630006J20; 9630039I18Rik	1810043M20Rik; E130112L15Rik; Bat2d1; mKIAA1096; A630006J20; 9630039I18Rik
Mus musculus	RefSeq	ILMN_198807	ILMN_230363	BAT2D	NM_001081290.1	NM_001081290.1		226562	124486834	NM_001081290.1	Bat2d	NP_001074759.1	ILMN_2532994	007160195	S	7861	CCAATCCCCCAGTGCTCTCCAGCAGGTTACAGTACCTTTACCAGCATCCC	1	-	164608334-164608359:164609631-164609654	1qH2.1	Mus musculus BAT2 domain containing 1 (Bat2d), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810043M20Rik; E130112L15Rik; Bat2d1; mKIAA1096; A630006J20; 9630039I18Rik	1810043M20Rik; E130112L15Rik; Bat2d1; mKIAA1096; A630006J20; 9630039I18Rik
Mus musculus	RefSeq	ILMN_215348	ILMN_230363	BAT2D	NM_001081290.1	NM_001081290.1		226562	124486834	NM_001081290.1	Bat2d	NP_001074759.1	ILMN_2697020	003520047	S	8357	GTCCCTCCATTGGTAAGAGCCCCACATACTAACACCTTCCCAGCGCCTGT	1	-	164605901-164605950	1qH2.1	Mus musculus BAT2 domain containing 1 (Bat2d), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810043M20Rik; E130112L15Rik; Bat2d1; mKIAA1096; A630006J20; 9630039I18Rik	1810043M20Rik; E130112L15Rik; Bat2d1; mKIAA1096; A630006J20; 9630039I18Rik
Mus musculus	RefSeq	ILMN_203504	ILMN_230363	BAT2D	NM_001081290.1	NM_001081290.1		226562	124486834	NM_001081290.1	Bat2d	NP_001074759.1	ILMN_1241229	007000438	S	1941	AGGAGCAGGAACTACAAAGGCTGAGAGAACAGGAAAAGGAGGGCGAGCCA	1	-	164640507-164640556	1qH2.1	Mus musculus BAT2 domain containing 1 (Bat2d), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810043M20Rik; E130112L15Rik; Bat2d1; mKIAA1096; A630006J20; 9630039I18Rik	1810043M20Rik; E130112L15Rik; Bat2d1; mKIAA1096; A630006J20; 9630039I18Rik
Mus musculus	RefSeq	ILMN_206388	ILMN_230363	BAT2D	NM_001081290.1	NM_001081290.1		226562	124486834	NM_001081290.1	Bat2d	NP_001074759.1	ILMN_1239599	004670392	S	1940	AAGGAGCAGGAACTACAAAGGCTGAGAGAACAGGAAAAGGAGGGCGAGCC	1	-	164640508-164640557	1qH2.1	Mus musculus BAT2 domain containing 1 (Bat2d), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810043M20Rik; E130112L15Rik; Bat2d1; mKIAA1096; A630006J20; 9630039I18Rik	1810043M20Rik; E130112L15Rik; Bat2d1; mKIAA1096; A630006J20; 9630039I18Rik
Mus musculus	RefSeq	ILMN_187333	ILMN_241771	FXR1H	NM_008053.1	NM_008053.1		14359	17998693	NM_008053.1	Fxr1h	NP_032079.1	ILMN_1237409	003190324	S	1975	AAAAATATATCATCAGATGTGCCTTGAGAATAGTATATGTAACATTAAAA	3	+	33968205-33968254	3qA3	Mus musculus fragile X mental retardation gene 1, autosomal homolog (Fxr1h), mRNA.				1110050J02Rik; Fxr1; Fxr1p; 9530073J07Rik	1110050J02Rik; Fxr1; Fxr1p; 9530073J07Rik
Mus musculus	RefSeq	ILMN_198636	ILMN_231934	LOC637776	XM_001001401.1	XM_001001401.1		637776	94382127	XM_001001401.1	LOC637776	XP_001001401.1	ILMN_1221957	007570202	S	1103	GCCTATTCGCAACAGAGTTGTCTCCAAATGCATGAAAGAACACATACAGG				7qB3	PREDICTED: Mus musculus similar to gonadotropin inducible ovarian transcription factor 1 (LOC637776), mRNA.					
Mus musculus	MEEBO	ILMN_191576	ILMN_191576	4933404O12RIK	scl066752.4_19						4933404O12Rik		ILMN_2480282	000380022	S	3	GAGGTAACATAGAGACATGAAGGGGTACACTGAGCTGGTCCCCAAGGGGG										
Mus musculus	Riken	ILMN_206075	ILMN_206075	E130003A04RIK	ri|E130003A04|PX00207A16|AK053263|1328					AK053263	E130003A04Rik		ILMN_1222377	003060711	S	1269	TTAGGACCAGTGGTTGTGGCATACACCTTTAATCCCGGCACTGATTCAGG										
Mus musculus	RefSeq	ILMN_220893	ILMN_220893	DR1	NM_026106.4	NM_026106.4		13486	118129880	NM_026106.4	Dr1	NP_080382.2	ILMN_2728290	000620327	S	2700	GAATGTTTTATGTTGAAGTTATTTCAAGGTATTTCATGGATATGCCCATG	5	+	108709160-108709209	5qF	Mus musculus down-regulator of transcription 1 (Dr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Dr1l; NC2beta; 1700121L09Rik; NC2	Dr1l; NC2beta; 1700121L09Rik; NC2
Mus musculus	RefSeq	ILMN_201271	ILMN_201271	OLFR150	XM_146788.5	XM_146788.5		258602	149259893	XM_146788.5	Olfr150	XP_146788.3	ILMN_2541702	001300224	S	692	CTGAGGGCAGATTCAAAGCCTTCAGCACATGTAGCTCCCACTTCTCTGCC	9	+	39545093-39545142	9qA5.1	PREDICTED: Mus musculus olfactory receptor 150 (Olfr150), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_214876	ILMN_214876	WDR57	NM_025645.2	NM_025645.2		66585	115298669	NM_025645.2	Wdr57	NP_079921.2	ILMN_2652961	006040768	S	1370	TTGAAAAATAAGATTCCTTCAGAAGGACAAACATTGGATTGATATTTCCT	4	+	130067060-130067109	4qD2.2	Mus musculus WD repeat domain 57 (U5 snRNP specific) (Wdr57), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		Prp8bp; 0610009C03Rik	Prp8bp; 0610009C03Rik
Mus musculus	RefSeq	ILMN_223814	ILMN_240286	4932414N04RIK	NM_183113.3	NM_183113.3		75721	146198731	NM_183113.3	4932414N04Rik	NP_898936.1	ILMN_2769754	001400372	S	3588	GCTTAATCAGTTCTGAAATAAGTTATCATAAATAATAAATGGCTTCCATT				2qC2	Mus musculus RIKEN cDNA 4932414N04 gene (4932414N04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197000	ILMN_248126	LOC381294	XM_981749.1	XM_981749.1		381294	94365635	XM_981749.1	LOC381294	XP_986843.1	ILMN_1221272	004900301	S	841	GTGGACTGAACCACCAAGATGCAAAGATCCAACAGGGAAATGTGGGCCTC					PREDICTED: Mus musculus complement factor H-like (LOC381294), mRNA.					
Mus musculus	RefSeq	ILMN_184443	ILMN_257515	HS3ST3B1	NM_018805.2	NM_018805.2		54710	84370342	NM_018805.2	Hs3st3b1	NP_061275.2	ILMN_1251178	002810603	S	4529	GGAGGCTCCAACAAGTCAGTGAGAATCAGAGGTGTTGATGTGGGCGCTGG	11	-	63699620-63699669	11qB3	Mus musculus heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 (Hs3st3b1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence IDA]	Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate [goid 33872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate, with a substrate consensus sequence of Glc(N2S>NAc)+/-6S GlcA GlcN2S*+/-6S GlcA>IdoA+/-2S Glc(N2S/NAc)+/-6S [goid 8467] [evidence IDA]	Hs3st3b; 3Ost3b; 3-OST-3B; AW536289; 3OST3B1; m3-OST-3B	Hs3st3b; 3Ost3b; 3-OST-3B; AW536289; 3OST3B1; m3-OST-3B
Mus musculus	RefSeq	ILMN_192786	ILMN_257515	HS3ST3B1	NM_018805.2	NM_018805.2		54710	84370342	NM_018805.2	Hs3st3b1	NP_061275.2	ILMN_2491319	005890682	S	3298	GGTTGGCCTCAATGTACACCGTGCTGAGTATGGACAGAAGAAAATGAGCA	11	-	63700851-63700900	11qB3	Mus musculus heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 (Hs3st3b1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence IDA]	Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate [goid 33872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate, with a substrate consensus sequence of Glc(N2S>NAc)+/-6S GlcA GlcN2S*+/-6S GlcA>IdoA+/-2S Glc(N2S/NAc)+/-6S [goid 8467] [evidence IDA]	Hs3st3b; 3Ost3b; 3-OST-3B; AW536289; 3OST3B1; m3-OST-3B	Hs3st3b; 3Ost3b; 3-OST-3B; AW536289; 3OST3B1; m3-OST-3B
Mus musculus	RefSeq	ILMN_193530	ILMN_257515	HS3ST3B1	NM_018805.2	NM_018805.2		54710	84370342	NM_018805.2	Hs3st3b1	NP_061275.2	ILMN_1233053	003290180	S	2130	GTATGCAAACACTTGATCCCTTTCCCAGGTCCCATGTGTCAGAGGCTTGG	11	-	63702019-63702068	11qB3	Mus musculus heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 (Hs3st3b1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence IDA]	Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate [goid 33872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate, with a substrate consensus sequence of Glc(N2S>NAc)+/-6S GlcA GlcN2S*+/-6S GlcA>IdoA+/-2S Glc(N2S/NAc)+/-6S [goid 8467] [evidence IDA]	Hs3st3b; 3Ost3b; 3-OST-3B; AW536289; 3OST3B1; m3-OST-3B	Hs3st3b; 3Ost3b; 3-OST-3B; AW536289; 3OST3B1; m3-OST-3B
Mus musculus	RefSeq	ILMN_193530	ILMN_257515	HS3ST3B1	NM_018805.2	NM_018805.2		54710	84370342	NM_018805.2	Hs3st3b1	NP_061275.2	ILMN_2646146	006220189	S	1552	CGACTTCGGCTGGGACTGAGTCTCCCCTCGCAGCTTATCTATTGAGAGAG	11	-	63702597-63702628:63702629-63702646	11qB3	Mus musculus heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1 (Hs3st3b1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence IDA]	Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate [goid 33872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate, with a substrate consensus sequence of Glc(N2S>NAc)+/-6S GlcA GlcN2S*+/-6S GlcA>IdoA+/-2S Glc(N2S/NAc)+/-6S [goid 8467] [evidence IDA]	Hs3st3b; 3Ost3b; 3-OST-3B; AW536289; 3OST3B1; m3-OST-3B	Hs3st3b; 3Ost3b; 3-OST-3B; AW536289; 3OST3B1; m3-OST-3B
Mus musculus	RefSeq	ILMN_192135	ILMN_245682	EG667723	XM_001001948.1	XM_001001948.1		667723	94405920	XM_001001948.1	EG667723	XP_001001948.1	ILMN_2777798	000270131	S	2769	AATTTGAACCTGAGTATTTGGCACATGATGGCTTAATAAATTTTAACTTT	19	+	40699034-40699083	19qC3	PREDICTED: Mus musculus predicted gene, EG667723 (EG667723), mRNA.					
Mus musculus	RefSeq	ILMN_193852	ILMN_226311	DNAJC5	NM_016775.2	NM_016775.2		13002	46519174	NM_016775.2	Dnajc5	NP_058055.1	ILMN_2671708	005670475	S	3348	GACCCGTCTACCAAGGCTGCTGGAGTGTAGGTTTCTGTTTGTGCCCAGTG	2	+	181286628-181286677	2qH4	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 5 (Dnajc5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	Csp; AU018536; 2610314I24Rik	Csp; AU018536; 2610314I24Rik
Mus musculus	MEEBO	ILMN_224120	ILMN_224120	ARG1	scl38114.7.1_13				31982504	NM_007482	Arg1		ILMN_2775157	005360035	S	759	TTCACCTGAGCTTTGATGTCGACGGGCTGGACCCAGCATTCACCCCGGCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6525] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2 [goid 16813] [evidence IEA]; Catalysis of the reaction: L-arginine + H2O = L-ornithine + urea [goid 4053] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214099	ILMN_214099	DALRD3	NM_026378.3	NM_026378.3		67789	110611930	NM_026378.3	Dalrd3	NP_080654.3	ILMN_2644238	005310397	S	1386	TGAGCCAGACTGTGAGTCTGGCCGGCACCCCAGGCCTCCACATCCCTGTC	9	+	108474567-108474616	9qF2	Mus musculus DALR anticodon binding domain containing 3 (Dalrd3), mRNA.		The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]	Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	6330580J24Rik; C77829	6330580J24Rik; C77829
Mus musculus	RefSeq	ILMN_194810	ILMN_225880	ATP8A1	NM_009727.2	NM_009727.2		11980	84781809	NM_009727.2	Atp8a1	NP_033857.1	ILMN_2509817	000270167	S	4827	TGCATACTGCTTATCGACACGAGAGAGATAAGGGGCACACTTCCCTCGTT	5	-	68012632-68012681	5qC3.1	Mus musculus ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 (Atp8a1), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	AW743152; B230107D19Rik; mKIAA4233; APLT; AI853962; KIAA4233; Class I; AW822227; AI481521; Atp3a2	AW743152; B230107D19Rik; mKIAA4233; APLT; AI853962; KIAA4233; Class I; AW822227; AI481521; Atp3a2
Mus musculus	RefSeq	ILMN_194810	ILMN_225880	ATP8A1	NM_009727.2	NM_009727.2		11980	84781809	NM_009727.2	Atp8a1	NP_033857.1	ILMN_1246298	005270386	S	3423	GAAGTTCAGGAGCTTGAGGCGAAATCTCAAGACCCGGGCGCAGTCGTACT	5	-	68021938-68021987	5qC3.1	Mus musculus ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 (Atp8a1), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	AW743152; B230107D19Rik; mKIAA4233; APLT; AI853962; KIAA4233; Class I; AW822227; AI481521; Atp3a2	AW743152; B230107D19Rik; mKIAA4233; APLT; AI853962; KIAA4233; Class I; AW822227; AI481521; Atp3a2
Mus musculus	RefSeq	ILMN_200368	ILMN_200368	LOC386336	XM_359175.1	XM_359175.1			38081440	XM_359175.1	LOC386336		ILMN_1254714	001660110	S	878	GTGACAGCAGATGCTGGCGAGGATGTGCAGATTCTGTTTTTATGTCTTCC										
Mus musculus	RefSeq	ILMN_198731	ILMN_198731	LOC233771	XM_150006.2	XM_150006.2			38087150	XM_150006.2	LOC233771		ILMN_2532722	000830500	S	465	CTTCCAACTCTCTTACCCCTCTGCTGTCTGAGTGCTGGGGCAGTGGGCAT										
Mus musculus	RefSeq	ILMN_217268	ILMN_217268	GPHN	NM_172952.2	NM_172952.2		268566	142350410	NM_172952.2	Gphn	NP_766540.1	ILMN_1214092	005260376	S	2924	GCCTCAGGCACAGTACTGGCAGGCAGTAACTGGATACCTTTTATTTGAAC	12	+	79785468-79785517	12qC3	Mus musculus gephyrin (Gphn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The biological process by which a synapse between a motor neuron and a muscle is initially formed [goid 7529] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence TAS]	GPHRYN; GPH; geph; C230040D23; AI662856; BC027112; 5730552E08Rik; MGC150066; MGC38765	GPHRYN; GPH; geph; C230040D23; AI662856; BC027112; 5730552E08Rik; MGC150066; MGC38765
Mus musculus	RefSeq	ILMN_188690	ILMN_310367	CDH18	NM_001081299.1	NM_001081299.1		320865	145587089	NM_001081299.1	Cdh18	NP_001074768.1	ILMN_2454860	001410239	S	2508	CAGGAGTTTATTAAGCAAAGACTCGCAGAAGCCGACCTGGACCCCAGCGT				15qA2	Mus musculus cadherin 18 (Cdh18), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Cdh14l; B230220E17Rik	Cdh14l; B230220E17Rik
Mus musculus	RefSeq	ILMN_261166	ILMN_261166	TMEM192	NM_028427.2	NM_028427.2		73067	142377404	NM_028427.2	Tmem192	NP_082703.1	ILMN_3162499	006770382	S	858	CGACACAATGCTCTGCTGAGTAAGCGGTTGTTGGAGCTGGCAACTCAGCC	8	+	67492668-67492717	8qB3.1	Mus musculus transmembrane protein 192 (Tmem192), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200629	ILMN_200629	LOC381790	XM_355791.1	XM_355791.1			38084555	XM_355791.1	LOC381790		ILMN_1259350	000150332	S	803	ACTGTTCCTCCATGTGTGCCCGACACCCAATAAAGCTGTATGGAGGATGG										
Mus musculus	RefSeq	ILMN_213059	ILMN_243398	OLFR608	NM_146756.2	NM_146756.2		258751	122056741	NM_146756.2	Olfr608	NP_666967.2	ILMN_1243468	006940204	S	836	GCATGTACCTTCTAGTGCCCCCCACAGTCAATCCGTTGGTGTATGGTGTC	7	+	110619390-110619439	7qE3	Mus musculus olfactory receptor 608 (Olfr608), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR26-3	MOR26-3
Mus musculus	RefSeq	ILMN_213458	ILMN_239898	RFC5	NM_028128.1	NM_028128.1		72151	110625923	NM_028128.1	Rfc5	NP_082404.1	ILMN_2662657	001260066	S	3	AGTGCGGCGGGTCAGTGGCAGGGACCCGCAGCATCTGTCAGTCATGACGG	5	-	117838980-117838987:117838988-117839029	5qF	Mus musculus replication factor C (activator 1) 5 (Rfc5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]	Recc5; 36kDa; MGC113787; 36.5kDa; 2610020K06Rik; 2610209F07Rik	Recc5; 36kDa; MGC113787; 36.5kDa; 2610020K06Rik; 2610209F07Rik
Mus musculus	RefSeq	ILMN_213458	ILMN_239898	RFC5	NM_028128.1	NM_028128.1		72151	110625923	NM_028128.1	Rfc5	NP_082404.1	ILMN_2637203	000150377	S	1612	AGACTGCACACCTCACTTGTTGGGGGGAATGGGGCACTGCAGACGTTCCT	5	-	117829222-117829271	5qF	Mus musculus replication factor C (activator 1) 5 (Rfc5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]	Recc5; 36kDa; MGC113787; 36.5kDa; 2610020K06Rik; 2610209F07Rik	Recc5; 36kDa; MGC113787; 36.5kDa; 2610020K06Rik; 2610209F07Rik
Mus musculus	RefSeq	ILMN_209083	ILMN_209083	ANKRD49	NM_019683.3	NM_019683.3		56503	141803047	NM_019683.3	Ankrd49	NP_062657.2	ILMN_2592358	007150553	S	1588	GTCCAGCACTATCCCCACGGCCCTCATTTTCTACAAGCCATGACAAAGGA	9	-	14584768-14584817	9qA2	Mus musculus ankyrin repeat domain 49 (Ankrd49), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]			MGC25252; Gbif; AW060934	MGC25252; Gbif; AW060934
Mus musculus	RefSeq	ILMN_217553	ILMN_226251	1810035L17RIK	NM_026958.2	NM_026958.2		380773	141802683	NM_026958.2	1810035L17Rik	NP_081234.1	ILMN_1239860	004070678	S	288	CGTTCAAGCTCAAAGAGCAAAGGCTTTGCACGGAGCTCAAACATCTGATG	12	+	88790759-88790808	12qD2	Mus musculus RIKEN cDNA 1810035L17 gene (1810035L17Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217553	ILMN_226251	1810035L17RIK	NM_026958.2	NM_026958.2		380773	141802683	NM_026958.2	1810035L17Rik	NP_081234.1	ILMN_2684667	007210019	S	79	GCGTTTGTCAGAAAAATTCCTTGGACCGCGGCAGCGAGTGAGCTGAGAGA	12	+	88784940-88784976:88788514-88788526	12qD2	Mus musculus RIKEN cDNA 1810035L17 gene (1810035L17Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219082	ILMN_227316	SLC25A18	NM_001081048.1	NM_001081048.1		71803	124486669	NM_001081048.1	Slc25a18	NP_001074517.1	ILMN_2704027	003940451	S	1537	ATCCTAACCTTGCCGCCCTAACAGATCAGAAGTGCACCTGTGCCCTCGCG	6	+	120738132-120738140:120738212-120738252	6qF1	Mus musculus solute carrier family 25 (mitochondrial carrier), member 18 (Slc25a18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC151205; AW125787; 1500015I14Rik	MGC151205; AW125787; 1500015I14Rik
Mus musculus	RefSeq	ILMN_208693	ILMN_208693	CCDC32	NM_199310.1	NM_199310.1		269336	40556291	NM_199310.1	Ccdc32	NP_955014.1	ILMN_2588650	002810154	S	1088	GGATTCGCTCACACACTCATCGTAAATGGACGGACTCCCAGGAACCGGGC	2	-	118844211-118844260	2qE5	Mus musculus coiled-coil domain containing 32 (Ccdc32), mRNA.				Gm631; MGC60849	Gm631; MGC60849
Mus musculus	Riken	ILMN_205399	ILMN_205399	E030042C16RIK	ri|E030042C16|PX00206J12|AK053213|2389					AK053213	E030042C16Rik		ILMN_2572260	000650010	S	2199	ACTGACACTTAACCTTCCCCCCAGTGGACAGTTTTCCTGACTTCTGTCCC										
Mus musculus	RefSeq	ILMN_241687	ILMN_241687	GM1967	NM_001033452.2	NM_001033452.2		381411	110625626	NM_001033452.2	Gm1967	NP_001028624.2	ILMN_2787817	000270093	S	1534	GGACTTGAAGATCCCCTTTTACAACGGTGGCTCTGGCCTCTTTGTCTGGA				2qE1	Mus musculus gene model 1967, (NCBI) (Gm1967), mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213414	ILMN_213414	CYB5R3	NM_029787.2	NM_029787.2		109754	31981358	NM_029787.2	Cyb5r3	NP_084063.1	ILMN_2636832	004590468	S	29	TAGCGGGTGTAGAACCGTGCGTGAGGCCACCGTCTCTTCTTCGCCACCAT	15	-	83002560-83002562:83002563-83002609	15qE1	Mus musculus cytochrome b5 reductase 3 (Cyb5r3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence ISO]	C85115; Dia1; Dia-1; 0610016L08Rik; 2500002N19Rik	C85115; Dia1; Dia-1; 0610016L08Rik; 2500002N19Rik
Mus musculus	RefSeq	ILMN_213414	ILMN_213414	CYB5R3	NM_029787.2	NM_029787.2		109754	31981358	NM_029787.2	Cyb5r3	NP_084063.1	ILMN_2904686	005130041	S	1668	AGGTTTTCTTAGGAGGGTGTCTGGCAGAGACAGGCCAGCCCCCACTTGCT	15	-	82984244-82984293	15qE1	Mus musculus cytochrome b5 reductase 3 (Cyb5r3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence ISO]	C85115; Dia1; Dia-1; 0610016L08Rik; 2500002N19Rik	C85115; Dia1; Dia-1; 0610016L08Rik; 2500002N19Rik
Mus musculus	RefSeq	ILMN_213414	ILMN_213414	CYB5R3	NM_029787.2	NM_029787.2		109754	31981358	NM_029787.2	Cyb5r3	NP_084063.1	ILMN_2712873	000840309	S	1779	TCCATGCAGTCTTGAGTGCCCTAAGTTGTCAGCCCAACAGAGTTTGGTAG	15	-	82984133-82984182	15qE1	Mus musculus cytochrome b5 reductase 3 (Cyb5r3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence ISO]	C85115; Dia1; Dia-1; 0610016L08Rik; 2500002N19Rik	C85115; Dia1; Dia-1; 0610016L08Rik; 2500002N19Rik
Mus musculus	RefSeq	ILMN_197595	ILMN_197595	GM26	XM_111555.4	XM_111555.4		195296	51768682	XM_111555.4	Gm26	XP_111555.4	ILMN_1232057	006900246	S	147	GAGGGCTGTGCAGTGGTTCCGAAAGAATTCCAGGGGCAGCCTCATCAATC	14	+	53610880-53610929	14qC2	PREDICTED: Mus musculus gene model 26, (NCBI) (Gm26), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195967	ILMN_195967	2700045P11RIK	scl49419.1.2_39				38079702	XM_148080	2700045P11Rik		ILMN_2745185	006760382	S	525	CCAGCGCGTAAGGATGACCCCTTGCACGACCCCACCAAGGACAAGACCAA										
Mus musculus	Riken	ILMN_201776	ILMN_201776	MTAP7	ri|2010011C02|ZX00053D05|AK008182|1009					AK008182	Mtap7		ILMN_1231596	005910386	S	782	GGCGGCACTTGGTGGTGAGGTAAAGTCCTCCTTTTGAAGCCTGTCTGCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis [goid 33327] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IPI]; The process whose specific outcome is the progression of a Sertoli cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a Sertoli cell fate [goid 60009] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nucleus [goid 6997] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209822	ILMN_209822	TEP1	NM_009351.2	NM_009351.2		21745	110350001	NM_009351.2	Tep1	NP_033377.1	ILMN_1239043	007100646	S	8009	GCTGTGGGAGACACACAAGGAAACTTGTATTTTCTATCTTGGGAATGAAG	14	-	51443840-51443842:51443843-51443889	14qC1	Mus musculus telomerase associated protein 1 (Tep1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISO]	The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IGI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	Tp1; MGC91078	Tp1; MGC91078
Mus musculus	MEEBO	ILMN_209145	ILMN_209145	GUCY2C	scl0001192.1_14	XM_132928.3			38085379	XM_132928.3	Gucy2c		ILMN_2646690	002320615	S	3203	ATCGTTAGCGCCTTACAGAAAAGACAGGCCTCGGGCAAGAAGAGCCGGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IDA]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]	Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IMP]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214898	ILMN_214898	MPA2L	NM_194336.1	NM_194336.1		100702	34996502	NM_194336.1	Mpa2l	NP_919317.1	ILMN_2653249	000110040	S	3830	AAATTAATTATTTCAAAATTAAAATGTAGACATTCTTAAGATTTCTGGAA	5	-	105700153-105700202	5qE5	Mus musculus macrophage activation 2 like (Mpa2l), mRNA.				AI595338	AI595338
Mus musculus	MEEBO	ILMN_188132	ILMN_188132	V1RD21	scl0404290.1_198				46430553	NM_207547	V1rd21		ILMN_2450052	006590707	S	14	TTCATACCTTTCTTATACATTATAATTTATTCATACGGCTTCTTGGTGAG								Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188802	ILMN_332517	GPR137B-PS	NR_003568.1	NR_003568.1		664862	148612896	NR_003568.1	Gpr137b-ps		ILMN_2455850	007040600	S	1746	CCGCCACTCAAGCATTCCAAGTTAAGGGGAAGCAGAGTACCACGGTCTGT				13qA1	Mus musculus G protein-coupled receptor 137B, pseudogene (Gpr137b-ps), non-coding RNA.				2310041G17Rik	2310041G17Rik
Mus musculus	RefSeq	ILMN_201285	ILMN_219534	4933416I08RIK	XM_204338.3	XM_204338.3		71159	94407160	XM_204338.3	4933416I08Rik	XP_204338.2	ILMN_1228277	001660139	S	154	GCTGTTTCTTCAACTGTGTTGGCAGATGTTTACTCAGGCTGATACTTGGG					PREDICTED: Mus musculus RIKEN cDNA 4933416I08 gene, transcript variant 1 (4933416I08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_225618	ILMN_225618	PGM2	NM_028132.2	NM_028132.2		72157	31980725	NM_028132.2	Pgm2	NP_082408.2	ILMN_2788673	004200575	S	2222	TTTGCATCTCCCATCTGCACAGATATTTGGGGTATTAAAGCAGAATGTGC	4	+	99659843-99659892	4qC6	Mus musculus phosphoglucomutase 2 (Pgm2), mRNA.		The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence IDA]	Pgm1; Pgm-2; 2610020G18Rik; AI098105; AA407108	Pgm1; Pgm-2; 2610020G18Rik; AI098105; AA407108
Mus musculus	MEEBO	ILMN_186884	ILMN_186884	1700001C07RIK	scl50848.2.4_56						1700001C07Rik		ILMN_1258763	000380195	S	10	GTCGCTCATTCGAACTTACAATACGAGCGCACATACGGACCTAGTCGGTC										
Mus musculus	RefSeq	ILMN_219813	ILMN_219813	CABP2	NM_013878.1	NM_013878.1		29866	7304940	NM_013878.1	Cabp2	NP_038906.1	ILMN_2915898	006940603	S	714	TGTTCGGATGATGTCTCGGTGAGCCTGTGTAGAAGCTGGAGTGGACCGGC	19	+	4087114-4087136:4087137-4087163	19qA	Mus musculus calcium binding protein 2 (Cabp2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC129493	MGC129493
Mus musculus	RefSeq	ILMN_222033	ILMN_222033	DPM2	NM_010073.2	NM_010073.2		13481	31560809	NM_010073.2	Dpm2	NP_034203.1	ILMN_2930095	000520377	S	753	TGGGGAAAGACTGACAAACCCCAGAACCACAGGGTTACATCCAGGCAGCC	2	+	32428983-32429032	2qB	Mus musculus dolichol-phosphate (beta-D) mannosyltransferase 2 (Dpm2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISM]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]; A protein complex that possesses dolichyl-phosphate beta-D-mannosyltransferase activity; contains a catalytic subunit, a regulatory subunit, and a third subunit that stabilizes the complex. In human and several other metazoa, the subunits are named DPM1, DPM2 and DPM3, respectively [goid 33185] [evidence ISO]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass [goid 9059] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISO]; The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units [goid 19348] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [evidence ISO]	R75484; AW557993	R75484; AW557993
Mus musculus	RefSeq	ILMN_218831	ILMN_218831	CNTROB	NM_172560.3	NM_172560.3		216846	145976947	NM_172560.3	Cntrob	NP_766148.2	ILMN_2700768	000290114	S	3647	GGAAAATGGAGATTTTTGTAGGAAGCTACTTTGTGAAGAAACCTTCCAGA				11qB3	Mus musculus centrobin, centrosomal BRCA2 interacting protein (Cntrob), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		Lip8; 9830165K03Rik; RP23-26L6.9	Lip8; 9830165K03Rik; RP23-26L6.9
Mus musculus	RefSeq	ILMN_217943	ILMN_217943	NPL	NM_028749.1	NM_028749.1		74091	21311854	NM_028749.1	Npl	NP_083025.1	ILMN_1231465	004480564	S	1177	ATGAACCTAAACTTTTTTGTTATAAAGGAGTCACAAGCTCTAAGTCATTC	1	-	155350322-155350371	1qG3	Mus musculus N-acetylneuraminate pyruvate lyase (Npl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: N-acetylneuraminate = N-acetyl-D-mannosamine + pyruvate [goid 8747] [evidence ISO]	0610033B02Rik	0610033B02Rik
Mus musculus	Riken	ILMN_203931	ILMN_203931	A130065C03RIK	ri|A130065C03|PX00124E07|AK037934|4507					AK037934	A130065C03Rik		ILMN_1254541	001300619	S	4352	TGTGAGACGAGGGGAGGGCAGTGGATAAAAGGAGTAGAAGCATCGCCCCG										
Mus musculus	RefSeq	ILMN_214611	ILMN_214611	4933425B16RIK	XM_132881.5	XM_132881.5		71183	149255442	XM_132881.5	4933425B16Rik	XP_132881.1	ILMN_2649867	003120743	S	1199	CCCTGCTATAAAACCTGCTCAATCATGTACAGGTCTGAGGGAGCCCAAGG	6	-	129325805-129325854	6qF3	PREDICTED: Mus musculus RIKEN cDNA 4933425B16 gene (4933425B16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214746	ILMN_214746	MUS81	NM_027877.2	NM_027877.2		71711	31980666	NM_027877.2	Mus81	NP_082153.2	ILMN_2651462	004730142	S	1223	GGAACGCAAGCGGCTAGATGACCTATGCAGCAGCATCATTGACGGCCGCT	19	-	5484864-5484913	19qA	Mus musculus MUS81 endonuclease homolog (yeast) (Mus81), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence ISO]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1200008A18Rik; AI182501; AW045863	1200008A18Rik; AI182501; AW045863
Mus musculus	RefSeq	ILMN_214746	ILMN_214746	MUS81	NM_027877.2	NM_027877.2		71711	31980666	NM_027877.2	Mus81	NP_082153.2	ILMN_2957665	000160646	S	1609	CAGAAGCTGTCAAGAACAAGGCCCAGTCTGTGCGAGAAGTATTTGCCCGG	19	-	5483520-5483558:5483635-5483645	19qA	Mus musculus MUS81 endonuclease homolog (yeast) (Mus81), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence ISO]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1200008A18Rik; AI182501; AW045863	1200008A18Rik; AI182501; AW045863
Mus musculus	RefSeq	ILMN_212990	ILMN_212990	NAAA	NM_025972.2	NM_025972.2		67111	142345314	NM_025972.2	Naaa	NP_080248.1	ILMN_2632362	007040292	S	1766	TACTTTTGAAAAATATATGACACCAAATAATATCCTGTCATCGTTTGTTA	5	-	92687294-92687343	5qE2	Mus musculus -acylethanolamine acid amidase (Naaa), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2210023K21Rik; 3830414F09Rik; NAAA	2210023K21Rik; 3830414F09Rik; NAAA
Mus musculus	MEEBO	ILMN_224282	ILMN_224282	MRGPRA2	scl0235712.1_204				23346530	NM_153101	Mrgpra2		ILMN_1237571	001820156	S	841	TTTCCATGTATTAGATGTTAATCTTTATCTAGCATTAGAAGTCCTGACTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187991	ILMN_228805	LOC243439	XM_992249.1	XM_992249.1		243439	94378725	XM_992249.1	LOC243439	XP_997343.1	ILMN_1232444	006550477	S	13	GTCCTTGCTCAGTTTCTTGCATTCTTGTTGCTTTGGTTTCCAGGTGCAAG				6qC1	PREDICTED: Mus musculus similar to Ig kappa chain V-V region L6 precursor (LOC243439), mRNA.					
Mus musculus	RefSeq	ILMN_213873	ILMN_213873	4432405B04RIK	NM_026486.1	NM_026486.1		67978	13385969	NM_026486.1	4432405B04Rik	NP_080762.1	ILMN_2971073	004760075	S	2465	GAGTGGCTCCGGATTATCACTCTCGATTCTAGCTGGTTGCAGGGGAATCG	5	+	124888123-124888172	5qF	Mus musculus RIKEN cDNA 4432405B04 gene (4432405B04Rik), mRNA.				Tect2	Tect2
Mus musculus	Riken	ILMN_204184	ILMN_204184	B130024L21RIK	ri|B130024L21|PX00158O11|AK045072|2012					AK045072	B130024L21Rik		ILMN_1247557	001780687	S	1616	GAGTCACCTGGAGGGAGCAGGTACATTGTCGGAAGTCCCTTGCAGCTCTG										
Mus musculus	RefSeq	ILMN_200684	ILMN_200684	LOC384481	XM_357668.1	XM_357668.1			38085126	XM_357668.1	LOC384481		ILMN_1252522	003400274	S	6	GTCTGACTGTTGCTACTCACTGAAATGGTCTGAACGAGGGAAGCTGTGCC										
Mus musculus	RefSeq	ILMN_214699	ILMN_214699	ATP6V0E	NM_025272.2	NM_025272.2		11974	50659078	NM_025272.2	Atp6v0e	NP_079548.1	ILMN_2650911	001710133	S	396	GCACATCAGACCTTCCTCCATAGCCCACTTCGGGCGTTACCTGCCTTACA	17	+	26836191-26836240	17qA3.3	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit E (Atp6v0e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISA]	The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence ISA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Atp6k; M9.2	Atp6k; M9.2
Mus musculus	RefSeq	ILMN_215111	ILMN_215111	SEC61A2	NM_021305.3	NM_021305.3		57743	118130500	NM_021305.3	Sec61a2	NP_067280.1	ILMN_2655668	003870070	S	576	GCTGCTGTTAGATGAGCTGCTACAGAAGGGTTACGGCTTGGGGTCTGGGA	2	-	5798981-5799030	2qA1	Mus musculus Sec61, alpha subunit 2 (S. cerevisiae) (Sec61a2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any part of a ribosome [goid 43022] [evidence IDA]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215111	ILMN_215111	SEC61A2	NM_021305.3	NM_021305.3		57743	118130500	NM_021305.3	Sec61a2	NP_067280.1	ILMN_1244414	004280053	S	2117	GCTACGAGTGCTGTCCAGCTGTATTGGCCATGCCTTCTACTCCAATGCCC	2	-	5792235-5792284	2qA1	Mus musculus Sec61, alpha subunit 2 (S. cerevisiae) (Sec61a2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any part of a ribosome [goid 43022] [evidence IDA]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214613	ILMN_214613	B230104C08RIK	scl077841.1_217				51713681	XM_489160	B230104C08Rik		ILMN_1221743	002230364	S	1250	GCCACAACAGTTGGCTAGGGAACTTTAGATGTCAGGACAAATGTAACACA										
Mus musculus	RefSeq	ILMN_221825	ILMN_221825	MRPL46	NM_023331.2	NM_023331.2		67308	42476182	NM_023331.2	Mrpl46	NP_075820.1	ILMN_2740922	002100427	S	800	AAGAGCCGCCATGTGTGGGCCAGTAAGGAAGAGCTGGGTGACTATCTGCA	7	-	85920406-85920455	7qD3	Mus musculus mitochondrial ribosomal protein L46 (Mrpl46), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]			LIECG2; C15orf4; C80107; 3110052F15Rik; P2ECSL	LIECG2; C15orf4; C80107; 3110052F15Rik; P2ECSL
Mus musculus	RefSeq	ILMN_187748	ILMN_187748	ZIC5	NM_022987.1	NM_022987.1		65100	33468974	NM_022987.1	Zic5	NP_075363.1	ILMN_2798820	004780131	S	1258	GGCTACGGAGCCGTGAACTTAAACCTGAACCTGGCTGCGGCAGCGGCGGC	14	-	121599531-121599580	14qE5	Mus musculus zinc finger protein of the cerebellum 5 (Zic5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Opr; 1700049L20Rik	Opr; 1700049L20Rik
Mus musculus	RefSeq	ILMN_197264	ILMN_260024	ZFP458	NM_001001152.2	NM_001001152.2		238690	118131073	NM_001001152.2	Zfp458	NP_001001152.1	ILMN_1250484	001010681	S	233	GAGACAAGCGGCCATCACTGTGCATCCAGGGGGAAAATGCTATACATGCA	13	-	67359059-67359080:67360497-67360524	13qB3	Mus musculus zinc finger protein 458 (Zfp458), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC062958; mszf59-2; Rslcan-7	BC062958; mszf59-2; Rslcan-7
Mus musculus	RefSeq	ILMN_260024	ILMN_260024	ZFP458	NM_001001152.2	NM_001001152.2		238690	118131073	NM_001001152.2	Zfp458	NP_001001152.1	ILMN_2806377	005670471	S	1857	GGAGAGAAACCGTACCACAGTCAAGCAAGTGGAAAGACCCTTGATTATCC	13	-	67357435-67357484	13qB3	Mus musculus zinc finger protein 458 (Zfp458), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC062958; mszf59-2; Rslcan-7	BC062958; mszf59-2; Rslcan-7
Mus musculus	RefSeq	ILMN_208670	ILMN_208670	BRP16	NM_021555.1	NM_021555.1		59053	10946997	NM_021555.1	Brp16	NP_067530.1	ILMN_2850402	007400152	S	1822	CAGCTAGATAGAACCTGCTCCTTGGTTAGCTTTTTCAAGTCTCGGTTGCC	15	+	76201696-76201745	15qD3	Mus musculus brain protein 16 (Brp16), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D15Ertd741e; MNCb-5873	D15Ertd741e; MNCb-5873
Mus musculus	RefSeq	ILMN_208670	ILMN_208670	BRP16	NM_021555.1	NM_021555.1		59053	10946997	NM_021555.1	Brp16	NP_067530.1	ILMN_2588417	006020088	S	618	TCTCCAACCTTAGCCAGCAGGCGGAGGTGCGTGCTTTTCTCCTGGACCCA	15	+	76199945-76199994	15qD3	Mus musculus brain protein 16 (Brp16), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D15Ertd741e; MNCb-5873	D15Ertd741e; MNCb-5873
Mus musculus	Riken	ILMN_205043	ILMN_205043	A830026B15RIK	ri|A830026B15|PX00154A16|AK043729|2414					AK043729	A830026B15Rik		ILMN_1246768	002350075	S	1962	CGTTCTTTCCACGGTCACTTCCAGCAGAGATCCTGTCCTGTGCCTTTTGC										
Mus musculus	RefSeq	ILMN_200112	ILMN_234608	ABHD7	NM_001001804.2	NM_001001804.2		384214	134948535	NM_001001804.2	Abhd7	NP_001001804.2	ILMN_1228797	004260184	S	917	GACCACCCCAACACTGCTTCTGTGGGGAGAGGAAGATGCGTTTATGGAGG	5	+	107837592-107837641	5qE5	Mus musculus abhydrolase domain containing 7 (Abhd7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Gm1382; Ephxrp	Gm1382; Ephxrp
Mus musculus	Riken	ILMN_206851	ILMN_206851	D430031C12RIK	ri|D430031C12|PX00194F09|AK085057|1136					AK085057	D430031C12Rik		ILMN_1244783	000610068	S	1015	CTGCCTCAGCACACTGAGATCCCTGCAATACCCAATGCTCTGCAGTGACG										
Mus musculus	MEEBO	ILMN_219862	ILMN_219862	5730420D15RIK	scl5689.4.1_29				51765807	XM_488572	5730420D15Rik		ILMN_2714509	005910608	S	1289	CCCCTTTAGGCAACTAGATCCTTGTCTTTGAGTATAAATGCTTCAGGAGA										
Mus musculus	RefSeq	ILMN_200774	ILMN_200774	LOC384566	XM_357713.1	XM_357713.1			38085996	XM_357713.1	LOC384566		ILMN_1227625	001190471	S	555	TGCCCAGGCACTTGGACACCAGAGCCCCACCTTCATGATCTACCACAGAC										
Mus musculus	RefSeq	ILMN_216132	ILMN_316224	LOC100041375	XM_001476442.1	XM_001476442.1		100041375	149254743	XM_001476442.1	LOC100041375	XP_001476492.1	ILMN_2672418	005870630	S	1937	ATTTTTGATGAAAATGTGAGCTATTGTAACATCTCTAATTGTAGAATTGT	5	-	146319610-146319659	5qG2	PREDICTED: Mus musculus similar to cytochrome P450 (LOC100041375), mRNA.					
Mus musculus	RefSeq	ILMN_219934	ILMN_219934	TEF	NM_153484.2	NM_153484.2		21685	118130107	NM_153484.2	Tef	NP_705617.1	ILMN_2715400	003170021	S	19	GTCCTCAAGTCCCTGCTGGAGCATTCTTTGCCTTGGTCAGAGAAGAAGGC	15	+	81633265-81633314	15qE1	Mus musculus thyrotroph embryonic factor (Tef), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	2310028D20Rik	2310028D20Rik
Mus musculus	RefSeq	ILMN_211714	ILMN_260150	4930404H21RIK	NM_028654.1	NM_028654.1		73808	115749425	NM_028654.1	4930404H21Rik	NP_082930.1	ILMN_1219309	002900162	S	698	GATGTTATCCCATCAGGCGGTCATAAAGACTCTGACCCAACACTACCTCA	7	-	140778874-140778923	7qF3	Mus musculus RIKEN cDNA 4930404H21 gene (4930404H21Rik), mRNA.				MGC118359	MGC118359
Mus musculus	MEEBO	ILMN_191087	ILMN_191087	SLCO3A1	scl31180.1.1_58				12963862	NM_023908	Slco3a1		ILMN_1226579	006400274	S	12	CAGCAGGGAGTTAGTTAAATCAGTGATAGTCTGCAATCCTGGTAGGAGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence ISO]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence ISO]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISO]	Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence ISO]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISO]		
Mus musculus	RefSeq	ILMN_215705	ILMN_215705	HMGB2L1	NM_178017.1	NM_178017.1		70823	30794253	NM_178017.1	Hmgb2l1	NP_821136.1	ILMN_2795395	006520576	S	3452	CATTTGACCCTGCAGAAGTTTCCTGTGAGAAATGGTATCAAGGAGAGGCC	8	+	77555479-77555528	8qC1	Mus musculus high mobility group box 2-like 1 (Hmgb2l1), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4733401K04Rik; AI316803; E430025G12	4733401K04Rik; AI316803; E430025G12
Mus musculus	RefSeq	ILMN_215705	ILMN_215705	HMGB2L1	NM_178017.1	NM_178017.1		70823	30794253	NM_178017.1	Hmgb2l1	NP_821136.1	ILMN_1259442	003990189	S	64	GGGAAGGAGCCTGGACACAGTGACACAACACATTCTCAAAGGCCCTGCAG	8	+	77522750-77522799	8qC1	Mus musculus high mobility group box 2-like 1 (Hmgb2l1), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4733401K04Rik; AI316803; E430025G12	4733401K04Rik; AI316803; E430025G12
Mus musculus	RefSeq	ILMN_215705	ILMN_215705	HMGB2L1	NM_178017.1	NM_178017.1		70823	30794253	NM_178017.1	Hmgb2l1	NP_821136.1	ILMN_1238509	005080523	S	3575	GGAGAACCGGCTTTTTCGGGTTTGTTTTCCTCTGAAGCCTAGCCCTGTTG	8	+	77555602-77555651	8qC1	Mus musculus high mobility group box 2-like 1 (Hmgb2l1), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4733401K04Rik; AI316803; E430025G12	4733401K04Rik; AI316803; E430025G12
Mus musculus	MEEBO	ILMN_224128	ILMN_224128	1500011H22RIK	scl26077.1_53				21312148	NM_026883	1500011H22Rik		ILMN_2775285	003440138	S	334	ACTTGAGCAGGGTCGGAGTGGGGAGAGCCGGAGGCCGCCGACTCAGAGCC										
Mus musculus	RefSeq	ILMN_221127	ILMN_221127	CHCHD2	NM_024166.4	NM_024166.4		14004	31981523	NM_024166.4	Chchd2	NP_077128.2	ILMN_2833786	003370273	S	14	TCCGGGCCTAGGACGCTGAGTCCAGGCTCTGCCCATTACTGATATCTCCT	5	-	130172110-130172159	5qG1.3	Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 2 (Chchd2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC103085; AL033347; Etohi6	MGC103085; AL033347; Etohi6
Mus musculus	RefSeq	ILMN_223016	ILMN_223016	ANXA13	NM_027211.1	NM_027211.1		69787	23956195	NM_027211.1	Anxa13	NP_081487.1	ILMN_1234773	003610521	S	1073	CTTCACCCCCTGGATTGTTTATTCATGGATTTAAAAGGAGCCCCAAGGCT	15	-	58173063-58173112	15qD1	Mus musculus annexin A13 (Anxa13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AV055219; 1810034H17Rik	AV055219; 1810034H17Rik
Mus musculus	Riken	ILMN_203879	ILMN_203879	A630064D11RIK	ri|A630064D11|PX00146H13|AK042154|1633					AK042154	A630064D11Rik		ILMN_1241349	000650592	S	369	GCCTGACAGCTGGGTGTGTGACTTAGCTCAAAGATTAGAACGACTCCGCA										
Mus musculus	RefSeq	ILMN_222555	ILMN_222555	1810063B05RIK	NM_174987.3	NM_174987.3		67892	142352059	NM_174987.3	1810063B05Rik	NP_778152.1	ILMN_1235281	007100634	S	369	CCAGTCTTCACAGTCGACTGAAAATTCCTAGGCTCTTTCTGGACTTTCAC	8	+	128948968-128948998:128948999-128949017	8qE2	Mus musculus RIKEN cDNA 1810063B05 gene (1810063B05Rik), mRNA.				AI447995	AI447995
Mus musculus	Riken	ILMN_202018	ILMN_202018	2810428M05RIK	ri|2810428M05|ZX00046P23|AK013185|2182					AK013185	2810428M05Rik		ILMN_1247958	007510148	S	633	CTCTTGGGAGGATTTGACAGATTTGGTGGAGCAAGTGCGTGCTGACCCAG										
Mus musculus	RefSeq	ILMN_214701	ILMN_214701	JMJD2B	NM_172132.1	NM_172132.1		193796	26006856	NM_172132.1	Jmjd2b	NP_742144.1	ILMN_2650915	001690402	S	4095	ACCGCCCACGGGTTGGCTATGGGCTCTGTCTCTTTAGAAGCTATGGCCAC	17	+	56541823-56541872	17qD	Mus musculus jumonji domain containing 2B (Jmjd2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0876; 4732474L06Rik; MGC6349	mKIAA0876; 4732474L06Rik; MGC6349
Mus musculus	RefSeq	ILMN_214701	ILMN_214701	JMJD2B	NM_172132.1	NM_172132.1		193796	26006856	NM_172132.1	Jmjd2b	NP_742144.1	ILMN_1246667	002100343	S	1292	AAATTAGTGTGAAGGAGAGCAGACCCTGGAGAAAGGCTGAGGAGGAGAGG	17	+	56528696-56528745	17qD	Mus musculus jumonji domain containing 2B (Jmjd2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0876; 4732474L06Rik; MGC6349	mKIAA0876; 4732474L06Rik; MGC6349
Mus musculus	RefSeq	ILMN_214701	ILMN_214701	JMJD2B	NM_172132.1	NM_172132.1		193796	26006856	NM_172132.1	Jmjd2b	NP_742144.1	ILMN_2990420	001980521	S	4505	TTTGCCTCATTCTCTGGCCTCCAGTTCAGTATCAATTAAAGCCCGTGAGC	17	+	56542233-56542282	17qD	Mus musculus jumonji domain containing 2B (Jmjd2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0876; 4732474L06Rik; MGC6349	mKIAA0876; 4732474L06Rik; MGC6349
Mus musculus	RefSeq	ILMN_200789	ILMN_311709	EG637758	XM_001477639.1	XM_001477639.1		637758	149271291	XM_001477639.1	EG637758	XP_001477689.1	ILMN_1233515	002350056	S	246	CCTGCTGTGGCCTGACAGAGAGAAGAAGGTGTATGTTAGACTGGTTCCTC				XqA4	PREDICTED: Mus musculus predicted gene, EG637758 (EG637758), mRNA.					
Mus musculus	RefSeq	ILMN_209239	ILMN_248338	TCERG1	NM_001039474.1	NM_001039474.1		56070	87196333	NM_001039474.1	Tcerg1	NP_001034563.1	ILMN_1230053	000020634	S	3139	CAGATCCAAAAAGTTAATCCAAGAATCTGATCAGCACCTGAAAGATGTAG	18	+	42733012-42733014:42734172-42734218	18qB3	Mus musculus transcription elongation regulator 1 (CA150) (Tcerg1), mRNA.	The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence ISS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ca150; Taf2s; AI428505; FBP 23; 2900090C16Rik; p144; 2410022J09Rik; CA150b	ca150; Taf2s; AI428505; FBP 23; 2900090C16Rik; p144; 2410022J09Rik; CA150b
Mus musculus	RefSeq	ILMN_209239	ILMN_248338	TCERG1	NM_001039474.1	NM_001039474.1		56070	87196333	NM_001039474.1	Tcerg1	NP_001034563.1	ILMN_2620492	001990575	S	1501	GCCAATGGAGACTGAGGAGGAAGATCCTAAGGAAGAGCCTGTGAAGGAGA	18	+	42696571-42696620	18qB3	Mus musculus transcription elongation regulator 1 (CA150) (Tcerg1), mRNA.	The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence ISS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ca150; Taf2s; AI428505; FBP 23; 2900090C16Rik; p144; 2410022J09Rik; CA150b	ca150; Taf2s; AI428505; FBP 23; 2900090C16Rik; p144; 2410022J09Rik; CA150b
Mus musculus	RefSeq	ILMN_207086	ILMN_248338	TCERG1	NM_001039474.1	NM_001039474.1		56070	87196333	NM_001039474.1	Tcerg1	NP_001034563.1	ILMN_1238423	004050088	S	3871	TCTCCCCTCCGGAGTTATAGGCCAAGTCTTGTTTACCCCAGGAGAAGATG	18	+	42734901-42734950	18qB3	Mus musculus transcription elongation regulator 1 (CA150) (Tcerg1), mRNA.	The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence ISS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ca150; Taf2s; AI428505; FBP 23; 2900090C16Rik; p144; 2410022J09Rik; CA150b	ca150; Taf2s; AI428505; FBP 23; 2900090C16Rik; p144; 2410022J09Rik; CA150b
Mus musculus	RefSeq	ILMN_212496	ILMN_212496	PWP2	NM_029546.1	NM_029546.1		110816	30102929	NM_029546.1	Pwp2	NP_083822.1	ILMN_2831491	001470292	S	3626	CTGTCTTGGTCACCTGGAACCCGCTCAGGCTTGAACACCGTTATGGGGAG	10	-	77574234-77574283	10qC1	Mus musculus PWP2 periodic tryptophan protein homolog (yeast) (Pwp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			6530411D08Rik; Pwp2h; MGC117973; wdp103	6530411D08Rik; Pwp2h; MGC117973; wdp103
Mus musculus	RefSeq	ILMN_209859	ILMN_209859	BC089491	NM_175033.3	NM_175033.3		280621	111159468	NM_175033.3	BC089491	NP_778198.2	ILMN_2599891	000110224	S	1130	CTGAAATGCTGCCAAACCAGGTCCTTTTCTGATGGTGGCTGGGGCTTGGG	7	-	29071152-29071171:29071115-29071144	7qA3	Mus musculus cDNA sequence BC089491 (BC089491), mRNA.			Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	Selv; MGC107154	Selv; MGC107154
Mus musculus	RefSeq	ILMN_210736	ILMN_210736	FGF4	NM_010202.4	NM_010202.4		14175	145966735	NM_010202.4	Fgf4	NP_034332.2	ILMN_2608629	001690092	S	346	TCAAAAGGCTTCGGCGGCTCTACTGCAACGTGGGCATCGGATTCCACCTG				7qF5	Mus musculus fibroblast growth factor 4 (Fgf4), mRNA.		The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IGI]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	kFGF; hst-1; KS3; Fgf-4; hst; MGC129266; Hstf-1; Fgfk; MGC129267	kFGF; hst-1; KS3; Fgf-4; hst; MGC129266; Hstf-1; Fgfk; MGC129267
Mus musculus	RefSeq	ILMN_201190	ILMN_201190	LOC384918	XM_357939.1	XM_357939.1			38089721	XM_357939.1	LOC384918		ILMN_1240424	004210438	S	896	AACAGCCCCAGTTCCTCGGTGCAGATGGAGGCAGGAAGGACCCTGTTTCA										
Mus musculus	RefSeq	ILMN_221005	ILMN_221005	FEV	NM_153111.1	NM_153111.1		260298	23346544	NM_153111.1	Fev	NP_694751.1	ILMN_1248029	005820048	S	287	AGGAAGGGAAGAGCCCGAGCTTGGGCCAGCTGAGCCCCGCGGTACAGAAA	1	-	74929236-74929236:74930981-74931029	1qC3	Mus musculus FEV (ETS oncogene family) (Fev), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mPet-1; Pet1; Pet-1	mPet-1; Pet1; Pet-1
Mus musculus	RefSeq	ILMN_221005	ILMN_221005	FEV	NM_153111.1	NM_153111.1		260298	23346544	NM_153111.1	Fev	NP_694751.1	ILMN_2729817	007320010	S	1288	CCCACAACCCACTCCAAAAGGTAGTACCTCAAGGCTTCTCGCACTCCCCT	1	-	74928235-74928284	1qC3	Mus musculus FEV (ETS oncogene family) (Fev), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mPet-1; Pet1; Pet-1	mPet-1; Pet1; Pet-1
Mus musculus	RefSeq	ILMN_187059	ILMN_254702	WHSC1	NM_001081102.1	NM_001081102.1		107823	124487396	NM_001081102.1	Whsc1	NP_001074571.1	ILMN_2440807	007570707	S	4250	CACCCCAAGGACCCAGCTCCTAGCGCTGTGTATAGGCCTGCTTGGGTGGG	5	+	34237897-34237946	5qB2	Mus musculus Wolf-Hirschhorn syndrome candidate 1 (human) (Whsc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	Whsc1l; AW555663; 5830445G22Rik; C130020C13Rik; 9430010A17Rik; D030027O06Rik; D930023B08Rik; mKIAA1090	Whsc1l; AW555663; 5830445G22Rik; C130020C13Rik; 9430010A17Rik; D030027O06Rik; D930023B08Rik; mKIAA1090
Mus musculus	RefSeq	ILMN_200003	ILMN_254702	WHSC1	NM_001081102.1	NM_001081102.1		107823	124487396	NM_001081102.1	Whsc1	NP_001074571.1	ILMN_1256982	006250504	S	3755	CCAGAAGGCGCAGAGCCAAGGGTGAAGGAAAACGGCAGTCAGAGGATGAG	5	+	34236106-34236155	5qB2	Mus musculus Wolf-Hirschhorn syndrome candidate 1 (human) (Whsc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	Whsc1l; AW555663; 5830445G22Rik; C130020C13Rik; 9430010A17Rik; D030027O06Rik; D930023B08Rik; mKIAA1090	Whsc1l; AW555663; 5830445G22Rik; C130020C13Rik; 9430010A17Rik; D030027O06Rik; D930023B08Rik; mKIAA1090
Mus musculus	RefSeq	ILMN_210860	ILMN_210860	OLFR1314	NM_146450.2	NM_146450.2		258442	116174763	NM_146450.2	Olfr1314	NP_666661.2	ILMN_2609919	001410132	S	563	CTTGTGTAGATACCAACCAATTAGAATTAATGGTTTCAGCCAATAGTGGC	2	-	111932244-111932293	2qE3	Mus musculus olfactory receptor 1314 (Olfr1314), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR245-2	MOR245-2
Mus musculus	RefSeq	ILMN_218811	ILMN_235548	FBXO41	NM_001001160.2	NM_001001160.2		330369	110625733	NM_001001160.2	Fbxo41	NP_001001160.1	ILMN_1228515	006400477	S	5474	GCTTGAGTACTTCATGCTTATGCAGGCTGCTTTTCCCCACAGTTATGGCA	6	-	85423930-85423979	6qC3	Mus musculus F-box protein 41 (Fbxo41), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	9630017H13; D6Ertd538e	9630017H13; D6Ertd538e
Mus musculus	RefSeq	ILMN_195741	ILMN_246605	SLC17A2	NM_144836.2	NM_144836.2		218103	70909325	NM_144836.2	Slc17a2	NP_659085.1	ILMN_1217058	006620681	S	2011	CTTCAAAAGCAGATCCCAGGCTACCCTCCAGAGTGAGTTAGTCTGTGGTG	13	+	23914431-23914480	13qA3.1	Mus musculus solute carrier family 17 (sodium phosphate), member 2 (Slc17a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	MGC19073; RP23-480B19.3; NPT3; C730032N17Rik	MGC19073; RP23-480B19.3; NPT3; C730032N17Rik
Mus musculus	RefSeq	ILMN_233875	ILMN_233875	1700129I15RIK	NM_030106.2	NM_030106.2		78478	114158706	NM_030106.2	1700129I15Rik	NP_084382.1	ILMN_2793688	002070551	S	31	GGGCAGCATCAGTTTGGCCCTGAAGCTAACTGAAGACAGAGCTGTTGGTC	X	-	132255132-132255181	XqF1	Mus musculus RIKEN cDNA 1700129I15 gene (1700129I15Rik), mRNA.				RP23-250F8.6; Tmsbl1	RP23-250F8.6; Tmsbl1
Mus musculus	RefSeq	ILMN_201325	ILMN_241068	LATS1	XM_618738.3	XM_618738.3		16798	94387911	XM_618738.3	Lats1	XP_618738.2	ILMN_1248249	000870541	S	2132	ACCCAAGGAAGATGATAGTGAGAAGAGTGCGGACAGTGGTGACTCTGGGG	10	+	7422669-7422718	10qA1	PREDICTED: Mus musculus large tumor suppressor, transcript variant 1 (Lats1), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217950	ILMN_217950	2310002J15RIK	NM_026415.1	NM_026415.1		67859	13385909	NM_026415.1	2310002J15Rik	NP_080691.1	ILMN_2892211	002260497	S	562	CCCAGGTTCCTGCTCAATGCCAAAGTGTTGCTGGACATCAGGAGCAGCCG	2	-	25060997-25061046	2qA3	Mus musculus RIKEN cDNA 2310002J15 gene (2310002J15Rik), mRNA.				AV023762	AV023762
Mus musculus	RefSeq	ILMN_207558	ILMN_207558	TUBB2B	NM_023716.2	NM_023716.2		73710	142378376	NM_023716.2	Tubb2b	NP_076205.1	ILMN_1229800	002030653	S	1861	GTTGAACCAAAAATGGCCTTACTCAATCCAACAATGAGAAGAAACAATGG	13	-	34218888-34218937	13qA3.3	Mus musculus tubulin, beta 2b (Tubb2b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2410129E14Rik	2410129E14Rik
Mus musculus	RefSeq	ILMN_207558	ILMN_207558	TUBB2B	NM_023716.2	NM_023716.2		73710	142378376	NM_023716.2	Tubb2b	NP_076205.1	ILMN_1221835	000650561	S	24	CGGAGTAAGTTCCAGGTGGCCCAGCAGTGGGTGTGGAAGGGGAGGATCAT	13	-	34222150-34222199	13qA3.3	Mus musculus tubulin, beta 2b (Tubb2b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2410129E14Rik	2410129E14Rik
Mus musculus	RefSeq	2410129E14Rik	ILMN_207558	TUBB2B	NM_023716.2	NM_023716.2		73710	142378376	NM_023716.2	Tubb2b	NP_076205.1	ILMN_1377919	001030133	S	1564	AGGTTTGTGCTGGGTCTCTGGTGCTCTTCACTGTTGCCTGTCACTTTTTT	13	-	34219185-34219234	13qA3.3	Mus musculus tubulin, beta 2b (Tubb2b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2410129E14Rik	2410129E14Rik
Mus musculus	RefSeq	ILMN_199062	ILMN_199062	LOC380654	XM_354561.1	XM_354561.1			38090681	XM_354561.1	LOC380654		ILMN_1212623	005130240	S	971	TCCCTCCCGGCTTTCTATACCACACACTGAGTGCTGAGCTGCGCAAAGAG										
Mus musculus	RefSeq	ILMN_207316	ILMN_247806	4921533I20RIK	XR_005149.1	XR_005149.1		664619	94404736	XR_005149.1	4921533I20Rik		ILMN_1237924	006520747	S	1524	TGACAGATCAGATGTCAAATAGGCTAGTATGCACTTGGCATCCAACTCTC				18qA1	PREDICTED: Mus musculus Riken cDNA 4921533I20 gene (4921533I20Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_189321	ILMN_261870	ANKRD25	NM_145611.3	NM_145611.3		235041	141802636	NM_145611.3	Ankrd25	NP_663586.2	ILMN_1240266	001010341	S	3180	GGGCCTGGGGTGTCTCTTGTGATTGCTTTACAGAATAAGATTGCCGTACC	9	-	21572811-21572860	9qA3	Mus musculus ankyrin repeat domain 25 (Ankrd25), mRNA.				BC010245; AI504612; MGC7734; MGC12143	BC010245; AI504612; MGC7734; MGC12143
Mus musculus	RefSeq	ILMN_217828	ILMN_313919	LOC100040328	XM_001474508.1	XM_001474508.1		100040328	149258971	XM_001474508.1	LOC100040328	XP_001474558.1	ILMN_1228737	003460709	S	528	CAGGGACTTTCTCACCTATACAGTGTTCTCATGTCAAATAAGATCATTGT	8	-	90568874-90568923	8qC3	PREDICTED: Mus musculus hypothetical protein LOC100040328 (LOC100040328), mRNA.					
Mus musculus	Riken	ILMN_202658	ILMN_202658	6720426B09RIK	ri|6720426B09|PX00059O23|AK020115|979					AK020115	6720426B09Rik		ILMN_1257969	002690139	S	928	TGCGGATGCCATGAGAGCACGGGCATTAGTACCCAGCCCTGAGGATGCCA										
Mus musculus	MEEBO	ILMN_210257	ILMN_210257	D17WSU104E	scl028106.1_129	NM_080837.1			18250287	NM_080837.1	D17Wsu104e		ILMN_2603781	006550671	S	654	CTCTCTGAGCCCGGTCACCTGTTTTGCCAGGGAAGATGCAGGGCATGTGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]		
Mus musculus	Riken	ILMN_204828	ILMN_204828	C630013B14RIK	ri|C630013B14|PX00083N16|AK049936|1256					AK049936	C630013B14Rik		ILMN_1220131	007560397	S	751	CCATAATCCTACCCCAGTTTCCCTAACCAAGGGCGGTGCATAGCGACAAG										
Mus musculus	Riken	ILMN_206021	ILMN_206021	C230084O18RIK	ri|C230084O18|PX00177B21|AK048948|785					AK048948	C230084O18Rik		ILMN_1217896	002450181	S	684	CAGAGCAGGCAGTCCATCCCGTTTTGTTGTGGTTACTTGCCCTGAGTGCT										
Mus musculus	RefSeq	ILMN_201521	ILMN_201521	PSG28	NM_054063.3	NM_054063.3		114871	70778834	NM_054063.3	Psg28	NP_473404.2	ILMN_2627050	006220424	S	1661	TATTAGATATTAGATATTAGAATGGCTATTCTACCCTTCTTTTTGTTTCC	7	-	19008123-19008172	7qA2	Mus musculus pregnancy-specific glycoprotein 28 (Psg28), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		MGC117567; MGC117566; cea16	MGC117567; MGC117566; cea16
Mus musculus	RefSeq	ILMN_192116	ILMN_192116	VAPA	NM_013933.2	NM_013933.2		30960	31980695	NM_013933.2	Vapa	NP_038961.2	ILMN_2485148	001110022	S	1488	CTTTACCTTTGCTAATATCATGGCAGAATTTTTCTTATCCCTTGTGAGGC	17	-	65929484-65929533	17qE1.1	Mus musculus vesicle-associated membrane protein, associated protein A (Vapa), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	33kDa; VAP33	33kDa; VAP33
Mus musculus	RefSeq	ILMN_220284	ILMN_220284	MEIS1	NM_010789.2	NM_010789.2		17268	118130144	NM_010789.2	Meis1	NP_034919.1	ILMN_1218266	007560647	S	2721	CAGCAAAGCATTGGTCATGTGTGTATTTTTCCATAGTCCCACCTTGGAGC	11	-	18780717-18780766	11qA3.1	Mus musculus Meis homeobox 1 (Meis1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IC ]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	C530044H18Rik; Evi8	C530044H18Rik; Evi8
Mus musculus	RefSeq	ILMN_220522	ILMN_220522	E330026B02RIK	NM_172927.2	NM_172927.2		245026	142353746	NM_172927.2	E330026B02Rik	NP_766515.1	ILMN_2723173	001010129	S	3704	CCGCGGAGAAAAAACTGACCGTGCATAACTTCGACGAGCTAAAAAAGGTG	9	-	105676642-105676691	9qF1	Mus musculus RIKEN cDNA E330026B02 gene (E330026B02Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	E330019B14; Col6a6	E330019B14; Col6a6
Mus musculus	RefSeq	ILMN_217915	ILMN_217915	DYNC1H1	NM_030238.2	NM_030238.2		13424	134288916	NM_030238.2	Dync1h1	NP_084514.2	ILMN_2689274	005290189	S	13922	ACAAGCTATCACTCTCCAATGCCATCTCCACAGTCCTCCCCCTCACACAG	12	+	111904537-111904586	12qF1	Mus musculus dynein cytoplasmic 1 heavy chain 1 (Dync1h1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Loa; Dnchc1; AI894280; 9930018I23Rik; mKIAA0325; Dnec1; DNCL; P22; DHC1a; MAP1C; Dnecl; DHC1	Loa; Dnchc1; AI894280; 9930018I23Rik; mKIAA0325; Dnec1; DNCL; P22; DHC1a; MAP1C; Dnecl; DHC1
Mus musculus	RefSeq	ILMN_186234	ILMN_238974	GLT25D1	NM_146211.2	NM_146211.2		234407	142387811	NM_146211.2	Glt25d1	NP_666323.1	ILMN_1256563	007570577	S	3073	GGGTGTTGCTGTCCCTTCAAAACCAAATTGACTGTCAACTGGACAGTGGG	8	+	74148674-74148723	8qB3.3	Mus musculus glycosyltransferase 25 domain containing 1 (Glt25d1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria [goid 9103] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC38524; 2810024B22Rik	MGC38524; 2810024B22Rik
Mus musculus	RefSeq	ILMN_193053	ILMN_315127	EG330031	XM_001473563.1	XM_001473563.1		330031	149253491	XM_001473563.1	EG330031	XP_001473613.1	ILMN_2493668	000010706	S	1238	CTGCAGTGTTTATGCTGACCATCACCTCTCTTTTCCCAACCACCATTCCC				5qA1	PREDICTED: Mus musculus predicted gene, EG330031 (EG330031), mRNA.					
Mus musculus	RefSeq	ILMN_187026	ILMN_187026	VAT1	NM_012037.2	NM_012037.2		26949	142364129	NM_012037.2	Vat1	NP_036167.1	ILMN_2440530	002900402	S	2425	TACACTGCTAGGGAAGGAGGAGCTCCGGCAAGGGAATAACTAGGCTGGTT	11	-	101320319-101320368	11qD	Mus musculus vesicle amine transport protein 1 homolog (T californica) (Vat1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	VAT-1	VAT-1
Mus musculus	RefSeq	ILMN_200473	ILMN_200473	LOC381733	XM_355712.1	XM_355712.1			38082384	XM_355712.1	LOC381733		ILMN_2538884	007650136	S	14	GTCTAGTCTTTTTGGATAAACAATCTGAGTTGCCCTTAATCGATTTGATG										
Mus musculus	RefSeq	ILMN_219154	ILMN_219154	OLFR749	NM_020288.1	NM_020288.1		56858	9938009	NM_020288.1	Olfr749	NP_064684.1	ILMN_1224751	006480372	S	776	CACTCTTCTATGGTACAGTAATGGTAATGTATGTGAGTCCTACATATGGC	14	-	51356044-51356093	14qC1	Mus musculus olfactory receptor 749 (Olfr749), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	ORL461; Ors1; MOR106-1	ORL461; Ors1; MOR106-1
Mus musculus	RefSeq	ILMN_199297	ILMN_232186	LOC382830	XR_004299.1	XR_004299.1		382830	94419260	XR_004299.1	LOC382830		ILMN_1248159	004060066	S	1285	GCCTCAGCTTAACGGAACAGAAGCAGCACTGGAAGACGCTGGGACAGACA					PREDICTED: Mus musculus similar to zinc finger protein 124 (LOC382830), mRNA.					
Mus musculus	RefSeq	ILMN_228133	ILMN_228133	WDR33	NM_028866.2	NM_028866.2		74320	21362284	NM_028866.2	Wdr33	NP_083142.2	ILMN_2780499	006180022	S	3914	GTAACTGGGGTAGAGGGAGTAACATGAACTCTGGCCCTCCAAGGCGAGGC	18	+	32066570-32066619	18qB1	Mus musculus WD repeat domain 33 (Wdr33), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			WDC146; 2310011G05Rik; 1110001N06Rik; 8430413N20Rik; 2810021O11Rik	WDC146; 2310011G05Rik; 1110001N06Rik; 8430413N20Rik; 2810021O11Rik
Mus musculus	MEEBO	ILMN_209169	ILMN_209169	EGFL8	scl50018.6.1_12	NM_152922.1			23463329	NM_152922.1	Egfl8		ILMN_2593187	001340754	S	619	AAGAGGAGCGAGCCCTGAGGTGGGAGGTTGCAGAGCTTCGTGGGCGTCTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [pmid 15162510] [evidence IEP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]		
Mus musculus	MEEBO	ILMN_209169	ILMN_209169	EGFL8	scl50018.6.1_12	NM_152922.1			23463329	NM_152922.1	Egfl8		ILMN_2593188	006180253	S	624	GAGCGAGCCCTGAGGTGGGAGGTTGCAGAGCTTCGTGGGCGTCTGGAGAA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [pmid 15162510] [evidence IEP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]		
Mus musculus	RefSeq	ILMN_198729	ILMN_225980	EG209380	NM_001001318.2	NM_001001318.2		209380	141802592	NM_001001318.2	EG209380	NP_001001318.1	ILMN_2532716	007050270	S	2402	TAGCCAAAAAGTCACAGCCCCACATTCACCCAATAGATATCCAGATGGCC	7	-	113565703-113565752	7qE3	Mus musculus predicted gene, EG209380 (EG209380), mRNA.					
Mus musculus	RefSeq	ILMN_222716	ILMN_222716	SPATA4	NM_133711.3	NM_133711.3		69281	142353599	NM_133711.3	Spata4	NP_598472.2	ILMN_2753808	004560291	S	991	TATAATGTCTCACCCCAGTCTTGGATGTATTTAAATAATAAATAACTTAA	8	+	55695385-55695434	8qB1.3	Mus musculus spermatogenesis associated 4 (Spata4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			1700001N01Rik; TSARG2; Srg2	1700001N01Rik; TSARG2; Srg2
Mus musculus	RefSeq	ILMN_188170	ILMN_247689	DNAJC6	NM_198412.1	NM_198412.1		72685	38259193	NM_198412.1	Dnajc6	NP_940804.1	ILMN_1230224	002070594	S	4969	CGCTCTTTCCCTGATGCATTATGATCCTGGACGCCTGTCTATCTCAAAAC	4	+	101315165-101315214	4qC6	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 6 (Dnajc6), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	mKIAA0473; 2810027M23Rik	mKIAA0473; 2810027M23Rik
Mus musculus	RefSeq	ILMN_191390	ILMN_191390	ZP3	NM_011776.1	NM_011776.1		22788	6756082	NM_011776.1	Zp3	NP_035906.1	ILMN_2478670	002060767	S	1021	CAAGCTCTTCACAGTTCCAGATCCATGGACCCCGCCAGTGGTCCAAGCTA	5	+	136463407-136463456	5qG2	Mus musculus zona pellucida glycoprotein 3 (Zp3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IDA]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IPI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Zp-3	Zp-3
Mus musculus	RefSeq	ILMN_193798	ILMN_240459	AMIGO2	NM_178114.3	NM_178114.3		105827	66392590	NM_178114.3	Amigo2	NP_835215.1	ILMN_2500533	004070328	S	2910	ACCTTAAGTTATGTGAATGGCTGAGTAGACCCTAATGTGCTGTGTTTCAG	15	-	97074594-97074643	15qF1	Mus musculus adhesion molecule with Ig like domain 2 (Amigo2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISO]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISS]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43069] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI415330; AW208913; Ali1	AI415330; AW208913; Ali1
Mus musculus	RefSeq	ILMN_193798	ILMN_240459	AMIGO2	NM_178114.3	NM_178114.3		105827	66392590	NM_178114.3	Amigo2	NP_835215.1	ILMN_2678355	002470753	S	2672	CTTATAACATCCACAGGGTTCTGCCACATCCCATGTAGTGCAAAGGGACA	15	-	97074832-97074881	15qF1	Mus musculus adhesion molecule with Ig like domain 2 (Amigo2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISO]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISS]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43069] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI415330; AW208913; Ali1	AI415330; AW208913; Ali1
Mus musculus	RefSeq	ILMN_208643	ILMN_208643	AI662250	NM_178926.2	NM_178926.2		106639	31341929	NM_178926.2	AI662250	NP_849257.1	ILMN_2799596	001070156	S	1751	TCCTGGTTTCTGTGCTGCCTAGAGCCTATGATGGTGAGGGTGCATTGCCC	17	-	56853659-56853708	17qD	Mus musculus expressed sequence AI662250 (AI662250), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space [goid 19215] [evidence ISO]	Vmac	Vmac
Mus musculus	RefSeq	ILMN_245168	ILMN_245168	GPR174	NM_001033251.1	NM_001033251.1		213439	85701751	NM_001033251.1	Gpr174	NP_001028423.1	ILMN_2836855	007330750	S	2805	GCCTATGGAAGAAACAGTGCACCAATTAGTCGCTAAGCTTGGGCAGAGTG	X	+	103497241-103497290	XqD	Mus musculus G protein-coupled receptor 174 (Gpr174), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	Gm376	Gm376
Mus musculus	MEEBO	ILMN_222972	ILMN_222972	GRIN2C	scl39346.15.1_80	NM_010350.1			7110608	NM_010350.1	Grin2c		ILMN_2757484	006650463	S	4382	ACAGGGACAGTGGGGTGCTAGAAGAGGTCAGCAGGGAAGCTTGTGGGACA						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD [goid 17146] [evidence IPI]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another along an axis [goid 33058] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42177] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IGI]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IMP]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP];  [goid 4972] [evidence IGI]		
Mus musculus	RefSeq	ILMN_200679	ILMN_233211	EG434077	XM_485815.4	XM_485815.4		434077	94378025	XM_485815.4	EG434077	XP_485815.1	ILMN_1248379	000160347	S	729	GATCGCTGCACTCGCCTACGACACAGCCAGCTTCTACCAGAAAGCAGATA	6	+	112556161-112556210	6qE3	PREDICTED: Mus musculus predicted gene, EG434077 (EG434077), mRNA.					
Mus musculus	MEEBO	ILMN_213707	ILMN_213707	ACCN1	scl0001303.1_407				13811381	AF348465	Accn1		ILMN_1230841	005090468	S	425	TTTCTCATATCAGCATGTTACCAAGGTGGATGAAGTGGTGGCCCAGAGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The series of events in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50974] [evidence IMP]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP];  [goid 15280] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210635	ILMN_210635	ENPP1	NM_008813.3	NM_008813.3		18605	153792210	NM_008813.3	Enpp1	NP_032839.3	ILMN_1231851	006580113	S	2589	GGAGTGCTCCGCCTTAGAGTCCTCAGCTTACATACTGCCTCATAGGCCTG				10qA4	Mus musculus ectonucleotide pyrophosphatase/phosphodiesterase 1 (Enpp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adipocyte differentiation [goid 45599] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The continuous turnover of bone matrix and mineral that involves first, an increase in resorption (osteoclastic activity) and later, reactive bone formation (osteoblastic activity). The process of bone remodeling takes place in the adult skeleton at discrete foci. The process ensures the mechanical integrity of the skeleton throughout life and plays an important role in calcium homeostasis. An imbalance in the regulation of bone resorption and bone formation results in many of the metabolic bone diseases, such as osteoporosis [goid 46849] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [evidence IEA]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [evidence IEA]	E-NPP1; Pca; CD203c; C76301; ttw; Ly-41; M6S1; Pdnp1; Npps; twy; PC-1; NPP1; Pca-1	E-NPP1; Pca; CD203c; C76301; ttw; Ly-41; M6S1; Pdnp1; Npps; twy; PC-1; NPP1; Pca-1
Mus musculus	RefSeq	ILMN_188852	ILMN_255106	ZFP120	NM_023266.4	NM_023266.4		104348	91064881	NM_023266.4	Zfp120	NP_075755.4	ILMN_2456317	003170279	S	3520	CTGAAGGAGCTCTTCAAGAAGCTGTAAAAGAAGTTAATATTGCATGTGGA	2	-	149940605-149940654	2qG3	Mus musculus zinc finger protein 120 (Zfp120), transcript variant 2, mRNA.				F80; AI315103; MZF31; E030042N05Rik	F80; AI315103; MZF31; E030042N05Rik
Mus musculus	RefSeq	ILMN_217369	ILMN_246297	PARD6A	NM_019695.2	NM_019695.2		56513	114145494	NM_019695.2	Pard6a	NP_062669.2	ILMN_2773789	005700746	S	1116	AGCGGATTCAGCCTCTGACAGGCAAAGATGCAGCCCTTGTCACTTTAGGC	8	+	108227245-108227262:108227263-108227294	8qD3	Mus musculus par-6 (partitioning defective 6,) homolog alpha (C. elegans) (Pard6a), transcript variant 1, mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The specification and formation of anisotropic intracellular organization or cell growth patterns [goid 30010] [evidence TAS]; The maintenance of junctions between cells [goid 45217] [evidence IDA]	Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TAX40; Par6; 0710008C04Rik; Tip-40; PAR6alpha; Par6c; Par-6	TAX40; Par6; 0710008C04Rik; Tip-40; PAR6alpha; Par6c; Par-6
Mus musculus	RefSeq	ILMN_248827	ILMN_248827	1110054O05RIK	NM_001013577.1	NM_001013577.1		66209	62526127	NM_001013577.1	1110054O05Rik	NP_001013595.1	ILMN_2983565	000630398	S	2884	GGACTCGGATGAAGCCTTGAGTGAATCCATTGCTGGGGTCACGGGTGGGT	4	-	59782801-59782850	4qB3	Mus musculus RIKEN cDNA 1110054O05 gene (1110054O05Rik), mRNA.				AA399876; 2610312O17Rik	AA399876; 2610312O17Rik
Mus musculus	RefSeq	ILMN_193722	ILMN_248827	1110054O05RIK	NM_001013577.1	NM_001013577.1		66209	62526127	NM_001013577.1	1110054O05Rik	NP_001013595.1	ILMN_1233708	002710035	S	152	GGCCACTGAATATAATTGACCCAGAATAGGAAGATGGCAGCAAATCCTTC	4	-	59795133-59795150:59795151-59795182	4qB3	Mus musculus RIKEN cDNA 1110054O05 gene (1110054O05Rik), mRNA.				AA399876; 2610312O17Rik	AA399876; 2610312O17Rik
Mus musculus	RefSeq	ILMN_195785	ILMN_248827	1110054O05RIK	NM_001013577.1	NM_001013577.1		66209	62526127	NM_001013577.1	1110054O05Rik	NP_001013595.1	ILMN_1247864	005820093	S	320	CTCTCCAGACCCTCTCTTACCAAGGACTTCCGGGACCATGCTGAGCAGCA	4	-	59786821-59786870	4qB3	Mus musculus RIKEN cDNA 1110054O05 gene (1110054O05Rik), mRNA.				AA399876; 2610312O17Rik	AA399876; 2610312O17Rik
Mus musculus	RefSeq	ILMN_184675	ILMN_248827	1110054O05RIK	NM_001013577.1	NM_001013577.1		66209	62526127	NM_001013577.1	1110054O05Rik	NP_001013595.1	ILMN_1220589	006980687	S	1497	AAGTATGGCTTAGGGAGTCCTATAATACCTTACACAAAGGTGTCATGATT	4	-	59784188-59784237	4qB3	Mus musculus RIKEN cDNA 1110054O05 gene (1110054O05Rik), mRNA.				AA399876; 2610312O17Rik	AA399876; 2610312O17Rik
Mus musculus	RefSeq	ILMN_189205	ILMN_255368	YWHAH	NM_011738.1	NM_011738.1		22629	6756036	NM_011738.1	Ywhah	NP_035868.1	ILMN_1253578	000620487	S	1	AAGCCCAGCCAGCGAGAAGGCGCGACGGGCGGCGCAGCTGCAGCCTCCCG	5	+	33355549-33355552:33361540-33361585	5qB1	Mus musculus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide (Ywhah), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence NAS]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [evidence NAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of dendrite morphogenesis [goid 50774] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]		
Mus musculus	RefSeq	ILMN_255368	ILMN_255368	YWHAH	NM_011738.1	NM_011738.1		22629	6756036	NM_011738.1	Ywhah	NP_035868.1	ILMN_2966722	002190544	S	1380	CAGCCTTTATAAACTGTTTCTTGTGAGCTTTCAGCAGCCCTTGCTGTGCC	5	+	33370302-33370351	5qB1	Mus musculus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide (Ywhah), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence NAS]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [evidence NAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of dendrite morphogenesis [goid 50774] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214049	ILMN_214049	SLC5A4B	NM_023219.2	NM_023219.2		64454	117676362	NM_023219.2	Slc5a4b	NP_075708.2	ILMN_1216446	000010670	S	1972	CACATCTGAGAAGCCCTTGTGGAGAACCGTCATGAACATCAATGCCGTCC	10	-	75537773-75537822	10qC1	Mus musculus solute carrier family 5 (neutral amino acid transporters, system A), member 4b (Slc5a4b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]		SGLT3-b; SAAT1; 2010104G07Rik; pSGLT2	SGLT3-b; SAAT1; 2010104G07Rik; pSGLT2
Mus musculus	RefSeq	ILMN_223419	ILMN_223419	5730593F17RIK	NM_172543.2	NM_172543.2		215512	141801972	NM_172543.2	5730593F17Rik	NP_766131.1	ILMN_1224162	004590102	S	2037	GCATGAGCAGCTCCATGCCCTCTACCCACCCCAAGGTTGGGTTGAATTAG	11	+	95242906-95242955	11qD	Mus musculus RIKEN cDNA 5730593F17 gene (5730593F17Rik), mRNA.				RP23-67E18.1; AW548096; FAM117A	RP23-67E18.1; AW548096; FAM117A
Mus musculus	RefSeq	ILMN_216899	ILMN_216899	A2BP1	NM_021477.4	NM_021477.4		268859	118130465	NM_021477.4	A2bp1	NP_067452.2	ILMN_1240035	004120402	S	385	GGAATTACTCCCTCTTCTTATCGCGCCAGACCCGGCTGCACCACGGAAGA	16	+	5885475-5885524	16qA1	Mus musculus ataxin 2 binding protein 1 (A2bp1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	A2bp; Hrnbp1; fox-1	A2bp; Hrnbp1; fox-1
Mus musculus	RefSeq	ILMN_196042	ILMN_228896	MYO1D	NM_177390.3	NM_177390.3		338367	118026910	NM_177390.3	Myo1d	NP_796364.2	ILMN_2645944	002760743	S	2872	CTGACCGTCACCTGTATAAAATGGACCCCACTAAGCAGTACAAGGTGATG	11	-	80400369-80400418	11qB5	Mus musculus myosin ID (Myo1d), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	myosin-1d; 9930104H07Rik; D11Ertd9e; AW544947	myosin-1d; 9930104H07Rik; D11Ertd9e; AW544947
Mus musculus	RefSeq	ILMN_194384	ILMN_228896	MYO1D	NM_177390.3	NM_177390.3		338367	118026910	NM_177390.3	Myo1d	NP_796364.2	ILMN_1238963	000610615	S	4899	TGTCAGGTCCACCAGCGATCGATCCGCAAAACCTGGCTGGCGGCACAGCA	11	-	80296033-80296082	11qB5	Mus musculus myosin ID (Myo1d), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	myosin-1d; 9930104H07Rik; D11Ertd9e; AW544947	myosin-1d; 9930104H07Rik; D11Ertd9e; AW544947
Mus musculus	MEEBO	ILMN_192288	ILMN_192288	BC021438	scl37227.2.1_30				21703829	NM_145416	BC021438		ILMN_2605740	006200202	S	1978	AGAAGGCCAGGCTGCTGGGTCCCACGGTGACACTTGGAGGTCACAAGTTC										
Mus musculus	MEEBO	ILMN_192288	ILMN_192288	BC021438	scl37227.2.1_30				21703829	NM_145416	BC021438		ILMN_2486702	006380133	S	5	CTGCAGCCACGGGTCTCCATGGCTACCATGATCCCTGAGTCTATACAGGT										
Mus musculus	RefSeq	ILMN_186999	ILMN_186999	TMC2	NM_138655.1	NM_138655.1		192140	20149733	NM_138655.1	Tmc2	NP_619596.1	ILMN_2440296	006370156	S	3144	GGGAAGAGCAATGGACCTCACACACTAGCGGTTTCCTTTGGCTCCAGACT	2	+	130090109-130090158	2qF1	Mus musculus transmembrane channel-like gene family 2 (Tmc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			CWEA2	CWEA2
Mus musculus	RefSeq	ILMN_196661	ILMN_196661	FBXO11	XM_110248.4	XM_110248.4			38082938	XM_110248.4	Fbxo11		ILMN_2525278	004050612	S	2166	CAGGAACGCTCAAGCAGGTGTCCTCATCAGCACTAACAGTCATCCAGTAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213258	ILMN_213258	SNX9	NM_025664.5	NM_025664.5		66616	153791678	NM_025664.5	Snx9	NP_079940.2	ILMN_1231181	002900047	S	1538	CGATGCAATCACAGAAGCTGGGAAGACGTATGAGGAGATCGCCAGCCTTG				17qA1	Mus musculus sorting nexin 9 (Snx9), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IDA]	2700073N08Rik; SH3PX1; SDP1	2700073N08Rik; SH3PX1; SDP1
Mus musculus	Riken	ILMN_207152	ILMN_207152	GP49A	ri|F730015K05|PL00003K09|AK089366|1217					AK089366	Gp49a		ILMN_1248139	005820739	S	1131	ACTGGATGGAACCAGGAGTCACTTTATCCACCTCATTGTCTCCTTGCTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_212164	ILMN_212164	RGMA	NM_177740.4	NM_177740.4		244058	146198559	NM_177740.4	Rgma	NP_808408.1	ILMN_1214500	004890747	S	3307	GAGTTGAAGCACTTTATTTTGGTTGTGTTTGATCACGTTCTGCTTGGAAG				7qD1	Mus musculus RGM domain family, member A (Rgma), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway [goid 30510] [evidence ISO]; Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway [goid 30510] [evidence IDA]; Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway [goid 30510] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence ISO]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC38550; MGC69915; C230063O06; BC059072	MGC38550; MGC69915; C230063O06; BC059072
Mus musculus	RefSeq	ILMN_223801	ILMN_238390	OLFR1179	NM_146917.2	NM_146917.2		258919	110735415	NM_146917.2	Olfr1179	NP_667128.2	ILMN_2769462	006510446	S	646	TACTATTTCATTTTATACACCATCAGGGCTTATCCTGCAGAGAGCCGCAG	2	-	88242394-88242443	2qD	Mus musculus olfactory receptor 1179 (Olfr1179), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR225-2	MOR225-2
Mus musculus	RefSeq	ILMN_208722	ILMN_208722	GNPTG	NM_172529.3	NM_172529.3		214505	133892310	NM_172529.3	Gnptg	NP_766117.2	ILMN_2617865	004540246	S	1063	GGACCTGCTGGCCAGCCTTTGTTGTGCCCAAAGATCCAGACAAAATAAAG	17	-	25371383-25371432	17qA3.3	Mus musculus N-acetylglucosamine-1-phosphotransferase, gamma subunit (Gnptg), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A830081F19; AU067667; 6430527N14Rik; AU067744; Tce7; Mdcp1	A830081F19; AU067667; 6430527N14Rik; AU067744; Tce7; Mdcp1
Mus musculus	RefSeq	ILMN_208722	ILMN_208722	GNPTG	NM_172529.3	NM_172529.3		214505	133892310	NM_172529.3	Gnptg	NP_766117.2	ILMN_2731999	004890343	S	1043	GTGTCACTGACAAACAAGAGGGACCTGCTGGCCAGCCTTTGTTGTGCCCA	17	-	25371403-25371452	17qA3.3	Mus musculus N-acetylglucosamine-1-phosphotransferase, gamma subunit (Gnptg), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A830081F19; AU067667; 6430527N14Rik; AU067744; Tce7; Mdcp1	A830081F19; AU067667; 6430527N14Rik; AU067744; Tce7; Mdcp1
Mus musculus	Riken	ILMN_206140	ILMN_206140	A530050N04RIK	ri|A530050N04|PX00141D16|AK080033|1810					AK080033	A530050N04Rik		ILMN_1241316	000730672	S	1639	GCTTCTCCTGAACCAACAAGAGGGCTTTGTGGGAAAAGGTGCTTGCGGCC										
Mus musculus	RefSeq	ILMN_199901	ILMN_199901	LOC384047	XM_357386.1	XM_357386.1			38078840	XM_357386.1	LOC384047		ILMN_1250619	006220102	S	1351	GTGGTGCCCATTTCCTACTCCGGTCGAGTGGTGGCCTTTGGCTGCATTTC										
Mus musculus	RefSeq	ILMN_214109	ILMN_214109	THY1	NM_009382.3	NM_009382.3		21838	134152684	NM_009382.3	Thy1	NP_033408.1	ILMN_2644350	007040201	S	1561	GGGCAGGCGGTGGAGTGAGATCCGGCGTGCACACTTTTTGGAAGATAGCT	9	+	43856488-43856537	9qA5.1	Mus musculus thymus cell antigen 1, theta (Thy1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision [goid 46549] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]		Thy1.2; Thy1.1; CD90; Thy-1; Thy-1.2; T25	Thy1.2; Thy1.1; CD90; Thy-1; Thy-1.2; T25
Mus musculus	MEEBO	ILMN_193262	ILMN_193262	MAPK8IP2	scl47616.12_239				31982683	NM_021921	Mapk8ip2		ILMN_2495555	001090364	S	20	TGTGCTAGAAGAGCCGAGCTGAAGGTGGTGTGGCCCTCACAGACATTTAC						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence ISO]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IPI]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222769	ILMN_222769	MKRN3	NM_011746.2	NM_011746.2		22652	61675707	NM_011746.2	Mkrn3	NP_035876.2	ILMN_2754447	001990504	S	2461	GTGTGGGCTGTATGTGAATTGTGTGGATAATCTGCCCCTGCACTGATGTC	7	-	69562515-69562564	7qC	Mus musculus makorin, ring finger protein, 3 (Mkrn3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Zfp127; D7H15S9-1	Zfp127; D7H15S9-1
Mus musculus	Riken	ILMN_205511	ILMN_205511	HDGFRP3	ri|D130046F04|PX00184H01|AK051401|2788					AK051401	Hdgfrp3		ILMN_1245903	002120593	S	2443	GGTCTTGCTGTGTGTATACCGCTGTCTGCCTCACCGTGTAGCTCAGGCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_203315	ILMN_203315	E130112J05RIK	ri|E130112J05|PX00091J05|AK053589|1486					AK053589	E130112J05Rik		ILMN_2556365	003440193	S	1373	CTGGAGAGTGTTCTGGTTCCAGCCGTGATTTTAATACAGCCCAACTGCCC										
Mus musculus	RefSeq	ILMN_241791	ILMN_241791	ADAMTS15	NM_001024139.1	NM_001024139.1		235130	71725382	NM_001024139.1	Adamts15	NP_001019310.1	ILMN_3161887	003290475	S	5689	AGCTCATCATGTTAGGGAGGAGGCTGGAAGGAGCCCAGCGTGGAAGTCGG	9	-	30706929-30706978	9qA4	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15 (Adamts15), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_201817	ILMN_201817	2610104A14RIK	ri|2610104A14|ZX00061A19|AK011816|791					AK011816	2610104A14Rik		ILMN_1240605	000070400	S	661	AGCTGGCAAAGGCTCGTGACCTGACTTCATCCCTGAGCCCTGCTTGATGG										
Mus musculus	RefSeq	ILMN_219303	ILMN_219303	MAD2L2	NM_027985.2	NM_027985.2		71890	126090493	NM_027985.2	Mad2l2	NP_082261.2	ILMN_2707015	000270739	S	746	AGTCCTCGTGCACACAAGAGAAGCTGCTACTCGAAACATGGAGAAGATAC	4	+	147518776-147518825	4qE2	Mus musculus MAD2 mitotic arrest deficient-like 2 (yeast) (Mad2l2), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		2310033C13Rik; REV7; MAD2B	2310033C13Rik; REV7; MAD2B
Mus musculus	RefSeq	ILMN_215976	ILMN_215976	PSMB10	NM_013640.1	NM_013640.1		19171	7305416	NM_013640.1	Psmb10	NP_038668.1	ILMN_2914843	006350343	S	867	GACCCCTGACCCTGGAACTTCTTGAGGAAACTGTGCAGGCCATGGAGGTG	8	-	108824923-108824972	8qD3	Mus musculus proteasome (prosome, macropain) subunit, beta type 10 (Psmb10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	Mecl1	Mecl1
Mus musculus	Riken	ILMN_205988	ILMN_205988	D230045G11RIK	ri|D230045G11|PX00190M02|AK052091|1684					AK052091	D230045G11Rik		ILMN_1223901	005130768	S	1439	GCAGAGTAAGTCAGGAAGATGCTGGGCATAAACCAGTTTCCCCACGTATG										
Mus musculus	RefSeq	ILMN_220363	ILMN_220363	CATSPER2	NM_153075.2	NM_153075.2		212670	124001553	NM_153075.2	Catsper2	NP_694715.2	ILMN_2721083	007400204	S	2148	GGTACAGTGGGTGACAGCTGTGTCCTTGGACCCAGCAAAAGCTAATGAAG	2	-	121220140-121220189	2qE5	Mus musculus cation channel, sperm associated 2 (Catsper2), mRNA.	A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; Cell motility due to movement of cilia or flagella [goid 1539] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221167	ILMN_221167	CLEC12A	NM_177686.3	NM_177686.3		232413	118130457	NM_177686.3	Clec12a	NP_808354.1	ILMN_1230533	002230241	S	2041	CCCACCCTGGTTAGTGAGGCCAAGTGGACTGAAGAAAATACCAGAGATCC	6	+	129315182-129315231	6qF3	Mus musculus C-type lectin domain family 12, member a (Clec12a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]	Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence ISO]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein phosphatase [goid 19903] [evidence ISO]	Micl; CLL-1; D230024O04	Micl; CLL-1; D230024O04
Mus musculus	RefSeq	ILMN_191433	ILMN_326991	ATXN7L3	NM_001098837.1	NM_001098837.1		217218	149588627	NM_001098837.1	Atxn7l3	NP_001092307.1	ILMN_1223340	004610538	S	3149	TTGTCCACAAAAACTTCCCCATTGTTCCTTGGCTCACCCTCAGGGCAGAA					Mus musculus ataxin 7-like 3 (Atxn7l3), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	E030022H21Rik; MGC161359	E030022H21Rik; MGC161359
Mus musculus	RefSeq	ILMN_191433	ILMN_326991	ATXN7L3	NM_001098837.1	NM_001098837.1		217218	149588627	NM_001098837.1	Atxn7l3	NP_001092307.1	ILMN_1247327	004860037	S	2442	GGGATGAGAAGGTAGTCTCTGCCCTGGGTTGTCAGTGGAGTTAGGAGGGG					Mus musculus ataxin 7-like 3 (Atxn7l3), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	E030022H21Rik; MGC161359	E030022H21Rik; MGC161359
Mus musculus	RefSeq	ILMN_207410	ILMN_326991	ATXN7L3	NM_001098837.1	NM_001098837.1		217218	149588627	NM_001098837.1	Atxn7l3	NP_001092307.1	ILMN_1238418	003520402	S	739	AAGCCAAGAAGAGAAAATCAGACAAGAACCCTAATTCCCCTCGAAGATCC					Mus musculus ataxin 7-like 3 (Atxn7l3), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	E030022H21Rik; MGC161359	E030022H21Rik; MGC161359
Mus musculus	RefSeq	ILMN_210544	ILMN_210544	DDX6	NM_007841.3	NM_007841.3		13209	118131155	NM_007841.3	Ddx6	NP_031867.1	ILMN_2758969	006200187	S	1471	GTGGTAATAAACTTTGACTTCCCAAAGCTGGCAGAGACCTATCTTCATCG	9	+	44442214-44442263	9qA5.2	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 (Ddx6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	mRCK/P54; HLR2; p54; rck; E230023J21Rik	mRCK/P54; HLR2; p54; rck; E230023J21Rik
Mus musculus	RefSeq	ILMN_210544	ILMN_210544	DDX6	NM_007841.3	NM_007841.3		13209	118131155	NM_007841.3	Ddx6	NP_031867.1	ILMN_2606667	002350243	S	2257	TTTGGTTTCACGTTGAAGTCTCACCTCCTGTTCTACCAGTACTCAGCCCA	9	+	44445111-44445160	9qA5.2	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 (Ddx6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	mRCK/P54; HLR2; p54; rck; E230023J21Rik	mRCK/P54; HLR2; p54; rck; E230023J21Rik
Mus musculus	RefSeq	ILMN_219458	ILMN_219458	PAPLN	NM_130887.1	NM_130887.1		170721	18700029	NM_130887.1	Papln	NP_570957.1	ILMN_2709167	002680672	S	4101	GAGGAACCCTTTACACCTCCCCTCTATAGTATCTACTGCACCGAGGACCT	12	+	85133153-85133202	12qD1	Mus musculus papilin, proteoglycan-like sulfated glycoprotein (Papln), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	E030033C16Rik	E030033C16Rik
Mus musculus	RefSeq	ILMN_217145	ILMN_248084	NDUFA11	XM_924988.3	XM_924988.3		69875	149269422	XM_924988.3	Ndufa11	XP_930081.2	ILMN_1246927	006400576	S	198	TTACAGCGTCTCACTCAACCCCGCAGATTCCACCCTGGAAGCAGTGGCCA				17qD	PREDICTED: Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 11, transcript variant 6 (Ndufa11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195943	ILMN_195943	6530402F18RIK	scl0076220.1_271						6530402F18Rik		ILMN_2520174	001660279	S	13	ACTAGAGAATTGAATTGTAAATTCCAGCCTGGTAAGGAAGGGGAGGGGGG										
Mus musculus	Riken	ILMN_201882	ILMN_201882	4921537P18RIK	ri|4921537P18|PX00015K17|AK015012|1456					AK015012	4921537P18Rik		ILMN_1259555	000540593	S	1134	AGTAACTCGGAGAGCAAGCCTCCTAACTGTGCTGGCAATTCACCGGCGGC										
Mus musculus	Riken	ILMN_203779	ILMN_203779	A230069K20RIK	ri|A230069K20|PX00128J04|AK038868|969					AK038868	A230069K20Rik		ILMN_1251858	000580671	S	744	AGTTACCTGTAAGGAGGAACTGAGGGGCCAGGTACAGCCCAGGCAGCTGA										
Mus musculus	RefSeq	ILMN_221585	ILMN_221585	4833427G06RIK	NM_177702.3	NM_177702.3		235345	142344151	NM_177702.3	4833427G06Rik	NP_808370.1	ILMN_2737496	003940309	S	704	GCAGACTTCCGGGAATTTGACAGTTACTGAACATTCATGTTAAAATAGAC	9	-	50889439-50889488	9qA5.3	Mus musculus RIKEN cDNA 4833427G06 gene (4833427G06Rik), mRNA.				MGC58631	MGC58631
Mus musculus	RefSeq	ILMN_213663	ILMN_213663	OLFR802	NM_146932.1	NM_146932.1		258934	22129040	NM_146932.1	Olfr802	NP_667143.1	ILMN_1218390	005720121	S	601	GCTGTTTTTACCCTAATGTTAACTTTGGTGTTAATATTTCTGTCCTATAC	10	-	129119143-129119192	10qD3	Mus musculus olfactory receptor 802 (Olfr802), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR111-1	MOR111-1
Mus musculus	Riken	ILMN_206485	ILMN_206485	D430021L16RIK	ri|D430021L16|PX00194I06|AK084985|3181					AK084985	D430021L16Rik		ILMN_1244850	006200612	S	3067	AATAACAGCAGCCGCAGGGGTGGTTGGTGGTGGGGTCACAATGCTGAAGG										
Mus musculus	RefSeq	ILMN_213159	ILMN_213159	MIR16	NM_019580.3	NM_019580.3		56209	32129286	NM_019580.3	Mir16	NP_062526.1	ILMN_2986315	004890500	S	1458	TGTCGTCAGCTTTGTTAATGGCGACCTGTAGGTGTCAAACTTGTGACCAC	7	-	118479728-118479777	7qF2	Mus musculus membrane interacting protein of RGS16 (Mir16), mRNA.				RGS16; 1200003M13Rik; GDE1	RGS16; 1200003M13Rik; GDE1
Mus musculus	RefSeq	ILMN_220011	ILMN_234240	ZNHIT6	NM_001081094.1	NM_001081094.1		229937	124487365	NM_001081094.1	Znhit6	NP_001074563.1	ILMN_1231612	004610736	S	1242	TTAATGAAATTCTAAAGCCTTACATCGATCCTGAAGAGTCTGACCCTGTG	3	+	145257584-145257633	3qH2	Mus musculus zinc finger, HIT type 6 (Znhit6), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_234240	ILMN_234240	ZNHIT6	NM_001081094.1	NM_001081094.1		229937	124487365	NM_001081094.1	Znhit6	NP_001074563.1	ILMN_3021192	001850273	I	469	GAAAGGCGTGTTGGAAGTGAAGCAGGAGGCGGATAGTAGCCTGGTGGTGA	3	+	145239640-145239689	3qH2	Mus musculus zinc finger, HIT type 6 (Znhit6), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222601	ILMN_222601	BC061237	NM_198677.1	NM_198677.1		385138	38348583	NM_198677.1	BC061237	NP_941079.1	ILMN_2930660	002490332	S	582	GGCGGAGGCTGCTATGTCAAATCCATGTGCCTGAGAGTCAAAAAGGCTGG	14	+	45125699-45125732:45125733-45125748	14qC1	Mus musculus cDNA sequence BC061237 (BC061237), mRNA.				MGC74390	MGC74390
Mus musculus	RefSeq	ILMN_197112	ILMN_197112	LOC240895	XM_136370.2	XM_136370.2			38074122	XM_136370.2	LOC240895		ILMN_1245505	005420470	S	1312	CTGGGAAGCAGCATGCGAGATTCAGGTCAGAGAACGCAGATGGGATCGGA										
Mus musculus	RefSeq	ILMN_210430	ILMN_256650	HFM1	NM_177873.1	NM_177873.1		330149	46810294	NM_177873.1	Hfm1	NP_808541.1	ILMN_2605533	007160255	S	1235	GGTTCGACTGTTTCTCATTGATGAGGTAGTAAACACGTTCACTTTCAGAG	5	-	107142344-107142393	5qE5	Mus musculus HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) (Hfm1), mRNA.			Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	A330009G12Rik	A330009G12Rik
Mus musculus	RefSeq	ILMN_245719	ILMN_245719	GPR31C	NM_001013832.1	NM_001013832.1		436440	62000689	NM_001013832.1	Gpr31c	NP_001013854.1	ILMN_2979721	001570392	S	651	CCGGAGGGCCAGGGTGCTGGTTGCCATAATGCTGCTACTGTTTGGACTGT	17	-	12894512-12894561	17qA1	Mus musculus G protein-coupled receptor 31, D17Leh66c region (Gpr31c), mRNA.				GPR31c(t)	GPR31c(t)
Mus musculus	RefSeq	ILMN_223141	ILMN_223141	1500002O20RIK	NM_028047.2	NM_028047.2		71997	118130421	NM_028047.2	1500002O20Rik	NP_082323.1	ILMN_1228208	006180543	S	2000	TCAAATGGGGGGCTGCTCACAGGGTGACTAAGAGATCCCACCCCGAGCCT	7	+	25207564-25207613	7qA3	Mus musculus RIKEN cDNA 1500002O20 gene (1500002O20Rik), mRNA.				N28092; AI429693	N28092; AI429693
Mus musculus	RefSeq	ILMN_218240	ILMN_218240	ELA1	NM_033612.1	NM_033612.1		109901	33239380	NM_033612.1	Ela1	NP_291090.1	ILMN_2693403	005290438	S	844	GTGGCCTCCCCAAGATGGCTCTTAGCTTTGCAATGAGACCTGAAGTAAGC	15	-	100505063-100505112	15qF1	Mus musculus elastase 1, pancreatic (Ela1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	1810009A17Rik; 1810062B19Rik; PC-TsF; Ela-1	1810009A17Rik; 1810062B19Rik; PC-TsF; Ela-1
Mus musculus	RefSeq	ILMN_190077	ILMN_224699	A630098A13RIK	XM_992785.1	XM_992785.1		320913	94397523	XM_992785.1	A630098A13Rik	XP_997879.1	ILMN_1236896	001010719	S	378	GGCTAAGTGGGCTGTCACTGGTGATATCTCACTTAGAAAATGTGTCAAGG					PREDICTED: Mus musculus RIKEN cDNA A630098A13 gene, transcript variant 5 (A630098A13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210488	ILMN_210488	PCGF1	NM_197992.1	NM_197992.1		69837	37574110	NM_197992.1	Pcgf1	NP_932109.1	ILMN_2606130	001510504	S	586	GAGCTGAGGTCCGCCATCTCCGAAGGGTTCTGTGTCACCGACTAATGCTA	6	+	83030073-83030122	6qC3	Mus musculus polycomb group ring finger 1 (Pcgf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2010002K04Rik; AU024121; Nspc1	2010002K04Rik; AU024121; Nspc1
Mus musculus	MEEBO	ILMN_193750	ILMN_193750	D630044D05RIK	scl17582.6.1_16						D630044D05Rik		ILMN_2500078	004120441	S	1	GCTACACAGTGTTGAGACAAATACTGTTCAGCCTAGTGTTGCTACTACAC										
Mus musculus	MEEBO	ILMN_217521	ILMN_217521	TLR4	scl0021898.1_32	NM_021297.1			10946593	NM_021297.1	Tlr4		ILMN_2684234	006290338	S	3517	TCCTTTTCCTTCATCATTCTCATTTCTGGACATGCCTTGTGAGATGGATC						Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence NAS]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-13 [goid 45368] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-1 [goid 45362] [evidence NAS]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; The synthesis or release of nitric oxide following a stimulus during an acute inflammatory response, resulting in an increase in its intracellular or extracellular levels [goid 2537] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IGI]; The appearance of interferon-gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon-gamma is also known as type II interferon [goid 32609] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_224131	ILMN_224131	OLFR1085	scl0258583.1_74				22129470	NM_146590	Olfr1085		ILMN_1248151	001070064	S	629	CTCTTCTGGTCGTCCTTCTGTCTTATCTGTTTATTCTCATAACTATTCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_242194	ILMN_242194	ARID4A	NM_001081195.1	NM_001081195.1		238247	124487104	NM_001081195.1	Arid4a	NP_001074664.1	ILMN_3127411	005270601	A	3422	TCTGGTGCCTGTAGTATAATTGCACACGAGCGAGAGAGCAGAGAGAAGGG	12	+	72177008-72177056:72177430-72177430	12qC3	Mus musculus AT rich interactive domain 4A (RBP1-like) (Arid4a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A630009N03; A630067N03Rik; MmRBBP1; Rbbp1	A630009N03; A630067N03Rik; MmRBBP1; Rbbp1
Mus musculus	RefSeq	ILMN_205470	ILMN_242194	ARID4A	NM_001081195.1	NM_001081195.1		238247	124487104	NM_001081195.1	Arid4a	NP_001074664.1	ILMN_1249368	000050356	S	201	GGGAAGAGAACTCGAGGAAGCTGGAACCCCACAGGTCACCAGTCAAGATG	12	+	72118083-72118129:72118130-72118132	12qC3	Mus musculus AT rich interactive domain 4A (RBP1-like) (Arid4a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A630009N03; A630067N03Rik; MmRBBP1; Rbbp1	A630009N03; A630067N03Rik; MmRBBP1; Rbbp1
Mus musculus	RefSeq	ILMN_205768	ILMN_242194	ARID4A	NM_001081195.1	NM_001081195.1		238247	124487104	NM_001081195.1	Arid4a	NP_001074664.1	ILMN_1239608	000450390	S	1435	TGAGGAGTACTGCCGTTCTGCAAATATTCAGTTCAGAACTATTCACCACC	12	+	72164095-72164144	12qC3	Mus musculus AT rich interactive domain 4A (RBP1-like) (Arid4a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A630009N03; A630067N03Rik; MmRBBP1; Rbbp1	A630009N03; A630067N03Rik; MmRBBP1; Rbbp1
Mus musculus	Riken	ILMN_203327	ILMN_203327	MYCBP	ri|8030486K20|PX00104C16|AK033289|1537					AK033289	Mycbp		ILMN_1231962	007210692	S	866	CTGCACTGCTAGTTCCAGGTCCTCAAAAGGACAGAAGTAAGCTGCACTCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_201338	ILMN_201338	LARP-PENDING	XM_126172.4	XM_126172.4			38091359	XM_126172.4	Larp-pending		ILMN_2758550	005870278	S	6401	CCAGAGTCTCTTGTCACAGGGCCCCTAGGTTTTCCCCAGCTCCCACCCTC										
Mus musculus	RefSeq	ILMN_201338	ILMN_201338	LARP-PENDING	XM_126172.4	XM_126172.4			38091359	XM_126172.4	Larp-pending		ILMN_1225054	003190187	S	6400	CCCAGAGTCTCTTGTCACAGGGCCCCTAGGTTTTCCCCAGCTCCCACCCT										
Mus musculus	RefSeq	ILMN_215764	ILMN_215764	CCDC99	NM_027411.1	NM_027411.1		70385	22296586	NM_027411.1	Ccdc99	NP_081687.1	ILMN_2663328	002650521	S	2022	ATGCGTGGGACACCCTTGTGGAGCTTTGCATAGGTCAGTGCTGAAGCCTG	11	-	34623108-34623157	11qA4	Mus musculus coiled-coil domain containing 99 (Ccdc99), mRNA.				AA409762; 2810049B11Rik; 1700018I02Rik; 2600001J17Rik	AA409762; 2810049B11Rik; 1700018I02Rik; 2600001J17Rik
Mus musculus	Riken	ILMN_202734	ILMN_202734	4831415H04RIK	ri|4831415H04|PX00102O11|AK019511|1111					AK019511	4831415H04Rik		ILMN_1213113	000620332	S	1019	GGTAACCTTCAGTGTCTTCAGCTTTTTGAGCCACAAGTTGGCCCCCGTGG										
Mus musculus	RefSeq	ILMN_214055	ILMN_214055	DLL3	NM_007866.2	NM_007866.2		13389	116292183	NM_007866.2	Dll3	NP_031892.2	ILMN_2643777	001500088	S	1921	GCTTTATTGTACATATTGCTTATTTATAACCTAGTTTTTCTCATCTCCCC	7	-	29080237-29080255:29080198-29080228	7qA3	Mus musculus delta-like 3 (Drosophila) (Dll3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence NAS]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence NAS]; The regionalization process by which embryonic segments are divided into compartments that will result in differences in cell differentiation [goid 7386] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube [goid 48339] [evidence IMP]	Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	pudgy; pu	pudgy; pu
Mus musculus	RefSeq	ILMN_218844	ILMN_261459	THEM4	NM_029431.1	NM_029431.1		75778	110626049	NM_029431.1	Them4	NP_083707.1	ILMN_1251524	003440411	S	1301	CCCCCACATCTCAGTTGTCTGGGGCCCTTGAGATTAAAATACTGCTCTTT	3	+	94136025-94136074	3qF2.1	Mus musculus thioesterase superfamily member 4 (Them4), mRNA. XM_918865 XM_972946 XM_972982 XM_973023 XM_993608	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]		2700077M13Rik; 4921507I02Rik	2700077M13Rik; 4921507I02Rik
Mus musculus	Riken	ILMN_201759	ILMN_201759	2610042F04RIK	ri|2610042F04|ZX00048K10|AK011740|1455					AK011740	2610042F04Rik		ILMN_2544368	005340332	S	645	TGACCTTGGTGCCTGCCACACAGGTAAGCCTGGACTCCCGTGTGCGAGAA										
Mus musculus	RefSeq	ILMN_224248	ILMN_245995	EXOC3	NM_177333.3	NM_177333.3		211446	84579824	NM_177333.3	Exoc3	NP_796307.2	ILMN_2777284	000290546	S	2205	GGGACATGAAACAGACCATCATGGAGACGCTGGAGCAGGGCCCCATGCAA	13	-	74309594-74309643	13qC1	Mus musculus exocyst complex component 3 (Exoc3), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Sec6; E430013E20Rik; 2810050O03Rik; Sec6l1	Sec6; E430013E20Rik; 2810050O03Rik; Sec6l1
Mus musculus	Riken	ILMN_205298	ILMN_205298	PPP1R1C	ri|4833441O04|PX00313N23|AK029467|2595					AK029467	Ppp1r1c		ILMN_1256084	005340739	S	2239	ACCTGATGTGAGTCTCTGGTCCCCACACATGCACGCAGGGCATACACGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193900	ILMN_313504	TSGA10IP	XR_034927.1	XR_034927.1		78306	149270269	XR_034927.1	Tsga10ip		ILMN_1217313	006960468	S	1629	AGCAACCGATCACTTAGAGCAGAAATGGAGCCCTCTTCTCAGAGCCCCCC	19	-	5390146-5390195	19qA	PREDICTED: Mus musculus testis specific 10 interacting protein (Tsga10ip), misc RNA.					
Mus musculus	RefSeq	ILMN_194817	ILMN_194817	TMEFF2	NM_019790.3	NM_019790.3		56363	141802899	NM_019790.3	Tmeff2	NP_062764.1	ILMN_2518100	007050647	S	3224	CCTAGTGAGGCATAGGTTTAAAGTAACAATTTCACTGACCTTTGCTTTCA	1	+	51243999-51244048	1qC1.1	Mus musculus transmembrane protein with EGF-like and two follistatin-like domains 2 (Tmeff2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4832418D20Rik	4832418D20Rik
Mus musculus	RefSeq	ILMN_194817	ILMN_194817	TMEFF2	NM_019790.3	NM_019790.3		56363	141802899	NM_019790.3	Tmeff2	NP_062764.1	ILMN_1232641	002510088	S	1682	GTACTACAGCTATATTTGATTATGTATGGATATATTTGAAATAGTATACA	1	+	51242457-51242506	1qC1.1	Mus musculus transmembrane protein with EGF-like and two follistatin-like domains 2 (Tmeff2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4832418D20Rik	4832418D20Rik
Mus musculus	RefSeq	ILMN_220367	ILMN_220367	LRRC41	NM_153521.1	NM_153521.1		230654	33859776	NM_153521.1	Lrrc41	NP_705741.2	ILMN_1220548	006840079	S	2471	CTGCCACTTTGTCTATTTCTGTTTCCTTTTCATCTTCCCTTGCACTGAGG	4	+	115769250-115769299	4qD1	Mus musculus leucine rich repeat containing 41 (Lrrc41), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW555107; MUF1; RP23-383D12.7; D630045E04Rik; AA409966; MGC38941; D730026A16Rik	AW555107; MUF1; RP23-383D12.7; D630045E04Rik; AA409966; MGC38941; D730026A16Rik
Mus musculus	RefSeq	ILMN_201571	ILMN_201571	RPS12	NM_011295.4	NM_011295.4		20042	56785412	NM_011295.4	Rps12	NP_035425.2	ILMN_2956159	006350128	S	76	TCACCGCCATGGCCGAGGAAGGCATAGCTGCTGGAGGTGTAATGGACGTC	7	-	23476267-23476296:23476410-23476423:23476424-23476429	10qA3	Mus musculus ribosomal protein S12 (Rps12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC102112; MGC102499; MGC117504; MGC102111	MGC102112; MGC102499; MGC117504; MGC102111
Mus musculus	RefSeq	ILMN_209055	ILMN_209055	SLC7A8	NM_016972.2	NM_016972.2		50934	40254562	NM_016972.2	Slc7a8	NP_058668.1	ILMN_2598877	006550687	S	3749	AGGGACCACCCGCTACCCCTCATTCCTCTCATTCCTTCAGCCTGTACCTG	14	-	55341287-55341336	14qC3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 8 (Slc7a8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence ISA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]	Catalysis of the transfer of amines, including polyamines, from one side of the membrane to the other. Amines are organic compounds that are weakly basic in character and contain an amino (-NH2) or substituted amino group [goid 5275] [evidence ISA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]	AA408822; LAT2	AA408822; LAT2
Mus musculus	RefSeq	ILMN_209055	ILMN_209055	SLC7A8	NM_016972.2	NM_016972.2		50934	40254562	NM_016972.2	Slc7a8	NP_058668.1	ILMN_2780392	003870681	S	3396	CCCACCTGGGACAAGAGGACAGAATGGCACTGACTTTGGAGACCTTAGAA	14	-	55341640-55341689	14qC3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 8 (Slc7a8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence ISA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]	Catalysis of the transfer of amines, including polyamines, from one side of the membrane to the other. Amines are organic compounds that are weakly basic in character and contain an amino (-NH2) or substituted amino group [goid 5275] [evidence ISA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]	AA408822; LAT2	AA408822; LAT2
Mus musculus	RefSeq	ILMN_222447	ILMN_222447	BCL3	NM_033601.1	NM_033601.1		12051	15809013	NM_033601.1	Bcl3	NP_291079.1	ILMN_2749717	004070020	S	1527	CATACTACTGAGCACAGATCCTCCCAATCGCGCCCCTTGCCCAGGACTCT	7	-	20394029-20394078	7qA3	Mus musculus B-cell leukemia/lymphoma 3 (Bcl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; An immune response against microbes mediated through a body fluid [goid 19730] [evidence IMP]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IMP]; The process by which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation [goid 2467] [evidence IMP]; Reactions triggered in response to the presence of a protozoan that act to protect the cell or organism [goid 42832] [evidence IMP]; The process whereby a B cell in the spleen acquires the specialized features of a marginal zone B cell. Marginal zone B cells are localized in a distinct anatomical region of the spleen that represents the major antigen-filtering and scavenging area (by specialized macrophages resident there). It appears that they are preselected to express a BCR repertoire similar to B-1 B cells, biased toward bacterial cell wall constituents and senescent self-components (such as oxidized LDL) [goid 2315] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-10 [goid 45082] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42536] [evidence IMP]; The process whereby a relatively unspecialized T cell acquires specialized features of a Th2 cell [goid 45064] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; The process whereby a relatively unspecialized precursor cell acquires the specialized features of a follicular dendritic cell [goid 2268] [evidence IMP]; The process by which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation [goid 2467] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AI528691; Bcl-3	AI528691; Bcl-3
Mus musculus	MEEBO	ILMN_192397	ILMN_192397	0710001D07RIK	scl50885.1.807_5						0710001D07Rik		ILMN_1259701	002810369	S	11	TGTGGATACGTTGGTTGGGGAAACATTCTCCGCTCTCATCTTCCATGTGG										
Mus musculus	RefSeq	ILMN_216923	ILMN_247415	EG665509	XM_982986.2	XM_982986.2		665509	149269899	XM_982986.2	EG665509	XP_988080.1	ILMN_1212626	003850477	S	114	CCAAAAGTACAGCGGGAAGGATGGAAACAACACTCAACTCTCCAAAACTG				18qA1	PREDICTED: Mus musculus predicted gene, EG665509 (EG665509), mRNA.					
Mus musculus	MEEBO	ILMN_192519	ILMN_192519	SCL0003778.1_17	scl0003778.1_17	BC055044.1			32822870	BC055044.1	scl0003778.1_17		ILMN_2488826	000990133	S	4	CCTAGAAGAGGAGATAACATCCATTCTGTTTAGTGGGCAGGGCTTTTCTC										
Mus musculus	RefSeq	ILMN_258292	ILMN_258292	4933422H20RIK	NM_001033775.3	NM_001033775.3		432613	146198578	NM_001033775.3	4933422H20Rik	NP_001028947.1	ILMN_3161452	006200349	S	1880	CATAGGTAGCGCCCGCCGGCCCAGGCTTGCTGCCAATAAAGTTAGACTCT				11qE2	Mus musculus RIKEN cDNA 4933422H20 gene (4933422H20Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RP23-392H19.2	RP23-392H19.2
Mus musculus	RefSeq	ILMN_197600	ILMN_316083	LOC547329	XM_001478379.1	XM_001478379.1		547329	149265575	XM_001478379.1	LOC547329	XP_001478429.1	ILMN_2528698	005260452	S	89	CTTCAATTTCTGTGATGGAGAAGACAACGGTGACAATGGACTGTGTGTAT	14	+	53667232-53667281	14qC2	PREDICTED: Mus musculus similar to T-cell receptor alpha chain (LOC547329), mRNA.					
Mus musculus	RefSeq	ILMN_197592	ILMN_316083	LOC547329	XM_001478379.1	XM_001478379.1		547329	149265575	XM_001478379.1	LOC547329	XP_001478429.1	ILMN_2528671	002630037	S	149	ACAGTTCTTACTTCTTATTCTGGTACAAGCAAACAGCAAGTGGGGAAATA	14	+	53667292-53667341	14qC2	PREDICTED: Mus musculus similar to T-cell receptor alpha chain (LOC547329), mRNA.					
Mus musculus	RefSeq	ILMN_197136	ILMN_255174	EG329123	XM_924103.2	XM_924103.2		329123	94363223	XM_924103.2	EG329123	XP_929196.2	ILMN_1231546	007330075	S	445	CACCACAATGGGGACATACAGCCTGCCCAGTGCCAAGAGTCATCCCAACG				1qB	PREDICTED: Mus musculus predicted gene, EG329123 (EG329123), mRNA.					
Mus musculus	Riken	ILMN_202355	ILMN_202355	4930470H18RIK	ri|4930470H18|PX00032G01|AK015536|1458					AK015536	4930470H18Rik		ILMN_1238828	000460196	S	334	CTCTCATCCCTGTGAGTGCTGAACCTAAGCTTCCAGAGCAGAACATCATG										
Mus musculus	MEEBO	ILMN_215749	ILMN_215749	AP4B1	scl0011779.1_324	NM_019504.1			9506388	NM_019504.1	Ap4b1		ILMN_1233951	002650386	S	2154	GCCCTGCGTGGTTTCGTCTCTGTCCTGGAAACTGTGATTGGAACGGTTGG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196437	ILMN_196437	1300010F03RIK	XM_127737.3	XM_127737.3			38076409	XM_127737.3	1300010F03Rik		ILMN_1226962	005290739	S	3166	GGATCCCCATTGGAGCAAAGCCTACCAACGTGCAGCTGGCAAAGGAGTAA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218843	ILMN_218843	EXOC3L	NM_177788.4	NM_177788.4		277978	146198586	NM_177788.4	Exoc3l	NP_808456.1	ILMN_1236298	005820008	S	2368	TCACCGTCCACTGGCCGCCGGGCGCTCTTCAGCCTGGTACCGACGCCTAC				8qD3	Mus musculus exocyst complex component 3-like (Exoc3l), mRNA.				C730015A04Rik	C730015A04Rik
Mus musculus	RefSeq	ILMN_244587	ILMN_244587	C330019L16RIK	NM_001034857.1	NM_001034857.1		208111	85702186	NM_001034857.1	C330019L16Rik	NP_001030029.1	ILMN_3105313	000360152	A	2166	CAGCCCAGGTGTTTTCGAATACATGAAAGAACACATACTGGAGAGAAACC	7	-	42385331-42385380	7qB3	Mus musculus RIKEN cDNA C330019L16 gene (C330019L16Rik), mRNA. XM_924349					
Mus musculus	RefSeq	ILMN_236155	ILMN_236155	ALX4	NM_007442.2	NM_007442.2		11695	118131056	NM_007442.2	Alx4	NP_031468.1	ILMN_2904175	002710736	S	1640	AAGGCAGTGGAGAGAGGCAGGCGGCTCTGTGCGTACCTTTGCATCATGTA	2	+	93517963-93518012	2qE1	Mus musculus aristaless-like homeobox 4 (Alx4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	lst	lst
Mus musculus	RefSeq	ILMN_222045	ILMN_227386	CLCN2	NM_009900.1	NM_009900.1		12724	6753431	NM_009900.1	Clcn2	NP_034030.1	ILMN_1256594	001300082	S	2821	CCGACAGTGATGACAAGTGCCAGTGAACCCCTTACGGATGGCCTGTATTC	16	-	20703291-20703315:20703316-20703340	16qB1	Mus musculus chloride channel 2 (Clcn2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]	Clc2; AL118368; ClC-2	Clc2; AL118368; ClC-2
Mus musculus	RefSeq	ILMN_218050	ILMN_231569	EVC2	NM_145920.2	NM_145920.2		68525	31981838	NM_145920.2	Evc2	NP_666032.1	ILMN_2690938	003310669	S	3761	CTCCAGCCCACGTGGGTTGGTCTGTCCGTCTATATCATACAGCTTGCAGT	5	+	37815973-37816022	5qB3	Mus musculus Ellis van Creveld syndrome 2 homolog (human) (Evc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			limbin; Lbn; 1110017L09Rik	limbin; Lbn; 1110017L09Rik
Mus musculus	Riken	ILMN_203430	ILMN_203430	C430002P19RIK	ri|C430002P19|PX00078E16|AK049389|2233					AK049389	C430002P19Rik		ILMN_2557244	007200414	S	2098	GGGAGCCCTCATGAACCTCAAATCCAGGGAGACTGCTGCCATGATTGCTC										
Mus musculus	MEEBO	ILMN_190567	ILMN_190567	SCRN1	scl28979.1_118				38044103	NM_027268	Scrn1		ILMN_1241383	007040519	S	19	CTGTCATCGAACATTGACGCAGGTGATGCTACTCTGGAAGGACCTCAGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190567	ILMN_190567	SCRN1	scl28979.1_118				38044103	NM_027268	Scrn1		ILMN_1239842	005420681	S	1	CCTGGCCCTGTGTGGAAATTGATTGGGATTTGATTGTCAGCAACTTGTAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198515	ILMN_198515	LOC330479	XM_287668.1	XM_287668.1			28477366	XM_287668.1	LOC330479		ILMN_1218121	000430221	S	119	GACCCCCGCGCCTTCACGGACACCTCTTCTACTACTGCACCTCAATGTGT										
Mus musculus	RefSeq	ILMN_222484	ILMN_261605	1700023I07RIK	NM_029707.2	NM_029707.2		76705	125347328	NM_029707.2	1700023I07Rik	NP_083983.2	ILMN_2750201	004220376	S	347	GCTGCTAATGCTTCAGAATGCCATGAAATGTTGAATCCAGATTGCTTAGA	X	+	22039104-22039153	XqA2	Mus musculus RIKEN cDNA 1700023I07 gene (1700023I07Rik), mRNA.					
Mus musculus	MEEBO	ILMN_191672	ILMN_191672	ABCA13	scl41840.44.1_0						Abca13		ILMN_2481160	000520653	S	20	CTATGCCTATTAATAACCAACAAACTAAAAGGTTACTCTCCAGTGTAGAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219635	ILMN_219635	1110028A07RIK	NM_026808.1	NM_026808.1		68680	34328074	NM_026808.1	1110028A07Rik	NP_081084.1	ILMN_1243516	006020209	S	487	TATTGCTGCATGAGCTGCCCGACCGCAAGAGTTGCCTGGCAGCCGGCCAC	14	+	56194724-56194773	14qC3	Mus musculus RIKEN cDNA 1110028A07 gene (1110028A07Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			Cg10671; MGC129517; AV010547; MGC129516	Cg10671; MGC129517; AV010547; MGC129516
Mus musculus	RefSeq	ILMN_218596	ILMN_255446	FGFR1OP	NM_201230.4	NM_201230.4		75296	146198680	NM_201230.4	Fgfr1op	NP_957682.1	ILMN_2697790	002750048	S	154	CCGCATCAAGGCTGAACTCAGAGCGGCTGTGTTTTTAGCACTAGAAGAAC				17qA1	Mus musculus Fgfr1 oncogene partner (Fgfr1op), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC90966; 4930553O10Rik; MGC117820; FOP	MGC90966; 4930553O10Rik; MGC117820; FOP
Mus musculus	RefSeq	ILMN_218477	ILMN_255446	FGFR1OP	NM_201230.4	NM_201230.4		75296	146198680	NM_201230.4	Fgfr1op	NP_957682.1	ILMN_2696339	006100273	S	2705	CCTTAATATTTGGTAGGCACTCCAGTTAGTGAACTGGCCTGCAAGCATGG				17qA1	Mus musculus Fgfr1 oncogene partner (Fgfr1op), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC90966; 4930553O10Rik; MGC117820; FOP	MGC90966; 4930553O10Rik; MGC117820; FOP
Mus musculus	RefSeq	ILMN_217944	ILMN_217944	DSCR1L2	NM_022980.3	NM_022980.3		53902	110625786	NM_022980.3	Dscr1l2	NP_075356.1	ILMN_2823269	001570725	S	4945	CGAACATTCCTTGTCCTGTAAGGAGGTGACAGAGGCAGACTGTGACCCGG				4qD3	Mus musculus Down syndrome critical region gene 1-like 2 (Dscr1l2), mRNA.				AU041093	AU041093
Mus musculus	RefSeq	ILMN_202374	ILMN_256409	RASD2	XM_983004.1	XM_983004.1		75141	94385198	XM_983004.1	Rasd2	XP_988098.1	ILMN_1234657	002710243	S	306	GGAAAGGTTTCTGGGTACCTGACCGTGTTGCGTTTGTTTCTACCCAACGT				8qC1	PREDICTED: Mus musculus RASD family, member 2 (Rasd2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISO]		
Mus musculus	RefSeq	ILMN_211032	ILMN_211032	GPRC5B	NM_022420.1	NM_022420.1		64297	23956117	NM_022420.1	Gprc5b	NP_071865.1	ILMN_2611767	000430066	S	4154	CAAGGATGCAGCGACCATGTGAGCTGATGAGAGCCCTTGGCAGGTGCTTT	7	-	126115819-126115868	7qF2	Mus musculus G protein-coupled receptor, family C, group 5, member B (Gprc5b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AW125761; Raig2	AW125761; Raig2
Mus musculus	RefSeq	ILMN_211032	ILMN_211032	GPRC5B	NM_022420.1	NM_022420.1		64297	23956117	NM_022420.1	Gprc5b	NP_071865.1	ILMN_2974506	002060368	S	3813	CCGAGGCTTGGTTGGGGAAATGGTCTAGAAAGTCACCTGGGAATAACCCC	7	-	126116160-126116209	7qF2	Mus musculus G protein-coupled receptor, family C, group 5, member B (Gprc5b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AW125761; Raig2	AW125761; Raig2
Mus musculus	Riken	ILMN_205534	ILMN_205534	ARVCF	ri|D130060P14|PX00185I13|AK051627|3829					AK051627	Arvcf		ILMN_2573293	003460722	S	2905	CCTGTTCCGGTCTCTGGAGATCAGGGTCCTGGGGAAACAGGCCCCCTATT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210791	ILMN_210791	DDX41	NM_134059.1	NM_134059.1		72935	21536245	NM_134059.1	Ddx41	NP_598820.1	ILMN_1224598	002630356	S	1871	CTGAGCCGTCTGACTTCTCTCTTCTCCCCAAGAGTCCAATGCTAGGACAC	13	-	55631909-55631955:55631956-55631958	13qB1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 (Ddx41), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	2900024F02Rik; AI324246; AA958953; ABS	2900024F02Rik; AI324246; AA958953; ABS
Mus musculus	RefSeq	ILMN_198537	ILMN_323910	LOC668990	XR_035071.1	XR_035071.1		668990	149271048	XR_035071.1	LOC668990		ILMN_1229224	005090674	S	78	ATGAGAGCGGCTTCTATCTGTGCTGGAAGATCTGGGGGTCTTCTCCAGGG	X	-	12955677-12955726	XqA1.1	PREDICTED: Mus musculus similar to vitamin D receptor interacting protein (LOC668990), misc RNA.					
Mus musculus	RefSeq	ILMN_188517	ILMN_250879	BAT4	NM_032460.1	NM_032460.1		81845	15638947	NM_032460.1	Bat4	NP_115849.1	ILMN_2621949	000050270	S	1268	GAAGGGCGGAGAGTTGGGAGATAAATAAACTTCCGGAATTTTTGAGACGT	17	+	35261400-35261449	17qB1	Mus musculus HLA-B associated transcript 4 (Bat4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bat-4; G5; D17H6S54E	Bat-4; G5; D17H6S54E
Mus musculus	RefSeq	ILMN_250879	ILMN_250879	BAT4	NM_032460.1	NM_032460.1		81845	15638947	NM_032460.1	Bat4	NP_115849.1	ILMN_2996046	001660767	S	1049	GAGAGAGTCCCTCGAGTTGCCACACTGAGTCAGAGGGAGAACAGAAGGCA	17	+	35261181-35261230	17qB1	Mus musculus HLA-B associated transcript 4 (Bat4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bat-4; G5; D17H6S54E	Bat-4; G5; D17H6S54E
Mus musculus	RefSeq	ILMN_188517	ILMN_250879	BAT4	NM_032460.1	NM_032460.1		81845	15638947	NM_032460.1	Bat4	NP_115849.1	ILMN_2749976	004280497	S	5	CCGGTGGTGCTGGTCATCTTCACAATAGCTACCTGAATGGTTGGATCGCT	17	+	35259901-35259930:35259931-35259950	17qB1	Mus musculus HLA-B associated transcript 4 (Bat4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bat-4; G5; D17H6S54E	Bat-4; G5; D17H6S54E
Mus musculus	Riken	ILMN_207398	ILMN_207398	E230029F23RIK	ri|E230029F23|PX00675P17|AK087634|2118					AK087634	E230029F23Rik		ILMN_1231355	007610224	S	2021	CACAGCTGCCTGTAACTTCCGTTCCAGTGGCTCCAACATCTCCATGGGCC										
Mus musculus	RefSeq	ILMN_189776	ILMN_229544	ACVR1B	NM_007395.3	NM_007395.3		11479	142366071	NM_007395.3	Acvr1b	NP_031421.1	ILMN_2464253	000770725	S	2780	GGTCCCTACTGAGGAGAGTGAGCGGTCCGAGCTGAATATGGTGTTTAACC	15	+	101042535-101042584	15qF2	Mus musculus activin A receptor, type 1B (Acvr1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence ISA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence TAS]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	SKR2; Acvrlk4; ActR-IB; Alk4; 6820432J04; ActRIB	SKR2; Acvrlk4; ActR-IB; Alk4; 6820432J04; ActRIB
Mus musculus	RefSeq	ILMN_195796	ILMN_229544	ACVR1B	NM_007395.3	NM_007395.3		11479	142366071	NM_007395.3	Acvr1b	NP_031421.1	ILMN_2746036	004200440	S	935	TAAGCTAGCCTTGTCTGCAGCCAGTGGTTTGGCACACCTGCATATGGAGA	15	+	101032512-101032561	15qF2	Mus musculus activin A receptor, type 1B (Acvr1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence ISA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence TAS]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	SKR2; Acvrlk4; ActR-IB; Alk4; 6820432J04; ActRIB	SKR2; Acvrlk4; ActR-IB; Alk4; 6820432J04; ActRIB
Mus musculus	RefSeq	ILMN_211861	ILMN_211861	BC049762	NM_177567.3	NM_177567.3		193286	141802050	NM_177567.3	BC049762	NP_808235.1	ILMN_1225817	003390093	S	517	TCTGTGTACCCTCAAACTCCCAGGAACCAGCCTTGGGATTATGGCGTCGC	11	-	51067469-51067518	11qB1.3	Mus musculus cDNA sequence BC049762 (BC049762), mRNA.				4930503F14	4930503F14
Mus musculus	MEEBO	ILMN_208683	ILMN_208683	TLN1	NM_011602.37_chr4_-_42382248_42382430_113	NM_011602.2			24475936	NM_011602.2	Tln1		ILMN_2605679	002480328	S	5566	TGACAGAGGCCGTAGAAGACCTGACGACGACCCTCAACGAAGCAGCCAGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209700	ILMN_209700	GALNT2	NM_139272.2	NM_139272.2		108148	46877108	NM_139272.2	Galnt2	NP_644678.2	ILMN_1240257	000870274	S	3900	GGTCCTTGAGTCTCCGTGAAGCTGAAAATGATGGTGTCTGTGAGTATGTT	8	+	126869412-126869461	8qE2	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (Galnt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence ISA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence ISA]	AI480629	AI480629
Mus musculus	RefSeq	ILMN_209700	ILMN_209700	GALNT2	NM_139272.2	NM_139272.2		108148	46877108	NM_139272.2	Galnt2	NP_644678.2	ILMN_2884416	005490452	S	3776	CTCGCCGAGCTTGTATTGCTTTGTAGTCATCTGGGCTATCCCACCCTCCC	8	+	126869288-126869337	8qE2	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (Galnt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence ISA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence ISA]	AI480629	AI480629
Mus musculus	RefSeq	ILMN_209700	ILMN_209700	GALNT2	NM_139272.2	NM_139272.2		108148	46877108	NM_139272.2	Galnt2	NP_644678.2	ILMN_1242677	002970349	S	1555	CGCTGGAGGAAACCAGGAATGGGCCTTGACAAAGGAGAAGTCGGTGAAGC	8	+	126862454-126862469:126864719-126864752	8qE2	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (Galnt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence ISA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence ISA]	AI480629	AI480629
Mus musculus	RefSeq	ILMN_221003	ILMN_221003	AHRR	NM_009644.2	NM_009644.2		11624	118130328	NM_009644.2	Ahrr	NP_033774.1	ILMN_2729783	004070681	S	4573	GGGGGAAAGTCCTCAAGAACTTTAGGCATACACTACAGTGCAGCTGTCTG	13	-	74348675-74348724	13qC1	Mus musculus aryl-hydrocarbon receptor repressor (Ahrr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mKIAA1234; KIAA1234	mKIAA1234; KIAA1234
Mus musculus	RefSeq	ILMN_192846	ILMN_316076	NOVA1	XM_001472258.1	XM_001472258.1		664883	149263218	XM_001472258.1	Nova1	XP_001472308.1	ILMN_1216247	003520180	S	3345	CATTGGACTGTTATTTCATTTAGAGTTCTCTATCTCTAAATATTTATTTA	12	-	47799097-47799146	12qB3	PREDICTED: Mus musculus neuro-oncological ventral antigen 1, transcript variant 1 (Nova1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IDA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]		
Mus musculus	RefSeq	ILMN_192846	ILMN_316076	NOVA1	XM_001472258.1	XM_001472258.1		664883	149263218	XM_001472258.1	Nova1	XP_001472308.1	ILMN_1217358	000620437	S	6769	GTTCTTCGTCGATAGAGCAAGGGAATCATGTGGCTTCTCACTGCAGAGGC	12	-	47795673-47795722	12qB3	PREDICTED: Mus musculus neuro-oncological ventral antigen 1, transcript variant 1 (Nova1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IDA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]		
Mus musculus	RefSeq	ILMN_192846	ILMN_316076	NOVA1	XM_001472258.1	XM_001472258.1		664883	149263218	XM_001472258.1	Nova1	XP_001472308.1	ILMN_2535371	007150438	S	757	AGCTGTCTCAATATCAGTTATGCCAATGTGACAGGTCCAGTGGCAAATTC	12	-	47801685-47801734	12qB3	PREDICTED: Mus musculus neuro-oncological ventral antigen 1, transcript variant 1 (Nova1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IDA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199481	ILMN_316076	NOVA1	XM_001472258.1	XM_001472258.1		664883	149263218	XM_001472258.1	Nova1	XP_001472308.1	ILMN_1241644	002490132	S	504	CCCCATGACCACCTCCAGAGCCAATCAGGTAAAGATTATAGTTCCCAACA	12	-	47801938-47801960:47814485-47814511	12qB3	PREDICTED: Mus musculus neuro-oncological ventral antigen 1, transcript variant 1 (Nova1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IDA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196947	ILMN_316076	NOVA1	XM_001472258.1	XM_001472258.1		664883	149263218	XM_001472258.1	Nova1	XP_001472308.1	ILMN_1225424	002360544	S	401	CAGAACCAGTCAGTATCCTACAACCTCAGACCACCGTTAATCCTGATCGC	12	-	47821685-47821734	12qB3	PREDICTED: Mus musculus neuro-oncological ventral antigen 1, transcript variant 1 (Nova1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IDA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]		
Mus musculus	Riken	ILMN_206846	ILMN_206846	NFS1	ri|D330050D10|PX00193O05|AK084831|1637					AK084831	Nfs1		ILMN_1235445	001340180	S	1249	GCATCACAGTCTCATAGCATCACAGACCCACAGCACTACAGCACCAGCCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]	The incorporation of iron into a metallo-sulfur cluster [goid 18283] [evidence IDA]; The chemical reactions and pathways involving cysteine, 2-amino-3-mercaptopropanoic acid [goid 6534] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine [goid 31071] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219377	ILMN_219377	SLC17A1	NM_009198.2	NM_009198.2		20504	31982007	NM_009198.2	Slc17a1	NP_033224.2	ILMN_2708010	000770142	S	1774	TGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGGTAGCATGAGGCTC	13	+	23987383-23987432	13qA3.1	Mus musculus solute carrier family 17 (sodium phosphate), member 1 (Slc17a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of phosphate (PO4 3-) ions from one side of a membrane to the other [goid 15114] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	Npt1; NAPI-1	Npt1; NAPI-1
Mus musculus	RefSeq	ILMN_193261	ILMN_259668	TMOD2	NM_001038710.1	NM_001038710.1		50876	84697030	NM_001038710.1	Tmod2	NP_001033799.1	ILMN_2495554	002030025	S	2571	CATGATTAAAAATAGATTTAAAAGTTATGGTACCTTAATCAAAGTTTCTG	9	-	75420764-75420813	9qD	Mus musculus tropomodulin 2 (Tmod2), transcript variant 1, mRNA. XM_001004496 XM_001004498	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 45745] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence ISO]	NTMOD; N-Tmod	NTMOD; N-Tmod
Mus musculus	RefSeq	ILMN_259668	ILMN_259668	TMOD2	NM_001038710.1	NM_001038710.1		50876	84697030	NM_001038710.1	Tmod2	NP_001033799.1	ILMN_3114546	006290368	A	9770	GGGTGCGATTTTTGGGCCCTTTGGAATTAGCACCCAGAGCTAATGTTAAG	9	-	75413565-75413614	9qD	Mus musculus tropomodulin 2 (Tmod2), transcript variant 1, mRNA. XM_001004496 XM_001004498	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 45745] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence ISO]	NTMOD; N-Tmod	NTMOD; N-Tmod
Mus musculus	RefSeq	ILMN_259668	ILMN_259668	TMOD2	NM_001038710.1	NM_001038710.1		50876	84697030	NM_001038710.1	Tmod2	NP_001033799.1	ILMN_3040018	006290767	I	290	GGGACCACCCAGACAATACGCGGAACACTTTCCCTGTGAGAGGTCGTTAA	9	-	75446601-75446650	9qD	Mus musculus tropomodulin 2 (Tmod2), transcript variant 1, mRNA. XM_001004496 XM_001004498	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 45745] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence ISO]	NTMOD; N-Tmod	NTMOD; N-Tmod
Mus musculus	RefSeq	ILMN_200760	ILMN_327726	LOC100043566	XM_001480544.1	XM_001480544.1		100043566	149256595	XM_001480544.1	LOC100043566	XP_001480594.1	ILMN_2539903	002370088	S	1468	CCTCACCCAGGAAGAGGACATCAAACAAGAAGAGGTTGTCCATCAGAAAG	7	-	21509737-21509786	7qA3	PREDICTED: Mus musculus hypothetical protein LOC100043566 (LOC100043566), mRNA.					
Mus musculus	RefSeq	ILMN_195482	ILMN_224679	HSPB1	NM_013560.1	NM_013560.1		15507	7305172	NM_013560.1	Hspb1	NP_038588.1	ILMN_2706269	005670722	S	573	CGCCCAAATTGGGGGCCCAGAAGCTGGGAAGTCTGAACAGTCTGGAGCCA	5	+	136365243-136365292	5qG2	Mus musculus heat shock protein 1 (Hspb1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]		Hsp25; 27kDa	Hsp25; 27kDa
Mus musculus	MEEBO	ILMN_193233	ILMN_193233	1700055D16RIK	scl0073359.1_5						1700055D16Rik		ILMN_2495245	006590598	S	2	TAGCGAGAGCCCGGGCGTTTGCAACTTTTCTTCACTTTCTCTTCCACCGC										
Mus musculus	RefSeq	ILMN_201079	ILMN_201079	LOC384757	XM_357846.1	XM_357846.1			38088838	XM_357846.1	LOC384757		ILMN_1234451	006960437	S	766	GCAGTGCTGATTCTGCAATGTCATGGTCTCAGCAATGCTCAGGGTGACAC										
Mus musculus	RefSeq	ILMN_215906	ILMN_215906	RAB31	NM_133685.1	NM_133685.1		106572	19526849	NM_133685.1	Rab31	NP_598446.1	ILMN_2665008	000290315	S	3164	GTGACTCAGCAGTCATACCGTCACACAGACTGTCGCCCTCTCCGGTGTTT	17	-	66001257-66001306	17qE1.1	Mus musculus RAB31, member RAS oncogene family (Rab31), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI415285; Rab22B; 1700093E07Rik	AI415285; Rab22B; 1700093E07Rik
Mus musculus	RefSeq	ILMN_211506	ILMN_211506	ARNT2	NM_007488.2	NM_007488.2		11864	34328094	NM_007488.2	Arnt2	NP_031514.2	ILMN_2616509	002140711	S	5304	GCTAATCCCTAATAGCAAGGCAAAATTAAAGCCCTCTTTGTATGTGGCCA	7	-	91395320-91395369	7qD3	Mus musculus aryl hydrocarbon receptor nuclear translocator 2 (Arnt2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a xenobiotic compound stimulus. Xenobiotic compounds are compounds foreign to living organisms [goid 9410] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [pmid 12502753] [evidence IEP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an aryl hydrocarbon receptor [goid 17162] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISA]	Hif-2b; mKIAA0307	Hif-2b; mKIAA0307
Mus musculus	RefSeq	ILMN_232962	ILMN_232962	SUMF2	NM_026445.1	NM_026445.1		67902	77377291	NM_026445.1	Sumf2	NP_080721.1	ILMN_3115185	003180279	A	1492	GGGAGAACCAAAGTCAGTGCCCCTCTAGGAAGACAAATGCCAGAACCTTC	5	+	130147991-130148040	5qG1.3	Mus musculus sulfatase modifying factor 2 (Sumf2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	2610040F05Rik	2610040F05Rik
Mus musculus	RefSeq	ILMN_232962	ILMN_232962	SUMF2	NM_026445.1	NM_026445.1		67902	77377291	NM_026445.1	Sumf2	NP_080721.1	ILMN_3040485	002470279	I	1	GAGACGCATGCGCTCTGAGTTCTGGTTCCCCAGCATGGGTTCCTTGCTCC	5	+	130131699-130131704:130131705-130131748	5qG1.3	Mus musculus sulfatase modifying factor 2 (Sumf2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	2610040F05Rik	2610040F05Rik
Mus musculus	RefSeq	ILMN_196938	ILMN_240190	ESPNL	NM_001033292.3	NM_001033292.3		227357	146198714	NM_001033292.3	Espnl	NP_001028464.1	ILMN_2526323	005360446	S	2678	CGCAAGATGCGCCACCTGCTGTGCTTCGAGGTTTTCGAGCATCTGGGCGC				1qD	Mus musculus espin-like (Espnl), mRNA.				Gm556	Gm556
Mus musculus	RefSeq	ILMN_197537	ILMN_197537	LOC239192	XM_139161.2	XM_139161.2			38076481	XM_139161.2	LOC239192		ILMN_1250512	001500646	S	295	GGAACCACAATGGTCTGGGTGCCTTTGCCATCAGGGTATGAAGCTGTTGG										
Mus musculus	RefSeq	ILMN_209730	ILMN_234862	OLFR907	NM_146805.2	NM_146805.2		258801	148230026	NM_146805.2	Olfr907	NP_667016.2	ILMN_2598615	000650241	S	686	GCTCCACAGCAGGAATGTCCAAAGCCTTCAGCACATGTAGCTCTCACATA				9qA5.1	Mus musculus olfactory receptor 907 (Olfr907), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR165-5	MOR165-5
Mus musculus	RefSeq	ILMN_197128	ILMN_197128	LOC226955	XM_136701.2	XM_136701.2			38074213	XM_136701.2	LOC226955		ILMN_1239965	005550059	S	1168	ACCAGAAGAGGGACACTTGGAGGCAAGCAGGGAAGATGGAGAGGCACCAG										
Mus musculus	MEEBO	ILMN_185724	ILMN_185724	4930463P07RIK	scl12575.1.1_286						4930463P07Rik		ILMN_2429469	002450612	S	20	AATAAAACCAGGGAATTCCATTTCCTTTGGGCTGCTGTGTTTGGACTTGG										
Mus musculus	MEEBO	ILMN_187954	ILMN_187954	V1RE4	scl50260.1.1_100				21717700	NM_134193	V1re4		ILMN_1256855	000430010	S	15	GAGGGTTCAACACATCCTCTGTACTCATACTTATCCAAGAAGATCCCCTG						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_238820	ILMN_238820	SLC35F4	NM_029238.1	NM_029238.1		75288	58037406	NM_029238.1	Slc35f4	NP_083514.1	ILMN_2807400	003060612	S	1503	TCATCTGTATCGGGTTTCTCCTGATGCTACTGCCGGAGGAGTGGGATGAA	14	-	48220799-48220848	14qC1	Mus musculus solute carrier family 35, member F4 (Slc35f4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		4930550L21Rik	4930550L21Rik
Mus musculus	MEEBO	ILMN_189635	ILMN_189635	2700050C19RIK	scl070232.4_204						2700050C19Rik		ILMN_2463033	002630575	S	16	GAGCATCTCATCATATTAACTCTGCACTGTCTCTTAGGACGTAACTGAGG										
Mus musculus	RefSeq	ILMN_196866	ILMN_196866	LOC217384	XM_137954.2	XM_137954.2			38049315	XM_137954.2	LOC217384		ILMN_2526073	002370035	S	5588	AGCCACAGAGGAAGAAACCTATGAAGAGGAGAAAGGTTGCTAGGCACCTC										
Mus musculus	RefSeq	ILMN_220182	ILMN_220182	RASGRF2	NM_009027.2	NM_009027.2		19418	7242198	NM_009027.2	Rasgrf2	NP_033053.2	ILMN_1250506	006580754	S	3514	GACGAAGATTCACTCTATGAGCTGTCACTCAAAATTGAACCTCGACTCCC				13qC3	Mus musculus RAS protein-specific guanine nucleotide-releasing factor 2 (Rasgrf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	Grf2; Ras-GRF2	Grf2; Ras-GRF2
Mus musculus	RefSeq	ILMN_190942	ILMN_247166	SCMH1	NM_013883.1	NM_013883.1		29871	22095026	NM_013883.1	Scmh1	NP_038911.1	ILMN_2720786	003710070	S	336	GAAATGCTGGTTTGCTACAGTGTTTTAGCTTGTGAGAGTCTCTGGGACCT	4	+	120134735-120134760:120135680-120135703	4qD2.2	Mus musculus sex comb on midleg homolog 1 (Scmh1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IC ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI315320; AI851618; Scml1; Scml3	AI315320; AI851618; Scml1; Scml3
Mus musculus	RefSeq	ILMN_190942	ILMN_247166	SCMH1	NM_013883.1	NM_013883.1		29871	22095026	NM_013883.1	Scmh1	NP_038911.1	ILMN_1230766	004880392	S	2786	GCTTCTGGCGTTTGGACTTAATGCTTCTCTTGCACCAAACAGTTTTTTGG	4	+	120202370-120202419	4qD2.2	Mus musculus sex comb on midleg homolog 1 (Scmh1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IC ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI315320; AI851618; Scml1; Scml3	AI315320; AI851618; Scml1; Scml3
Mus musculus	RefSeq	ILMN_209844	ILMN_209844	6030419C18RIK	NM_176921.2	NM_176921.2		319477	31342392	NM_176921.2	6030419C18Rik	NP_795895.1	ILMN_2599739	006130053	S	1978	ACCCGGAGGGTCACAAGGAACAGCAGCACTCAGACAGTATCAGACAAGAG	9	+	58297718-58297767	9qB	Mus musculus RIKEN cDNA 6030419C18 gene (6030419C18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209577	ILMN_209577	LNX1	NM_010727.3	NM_010727.3		16924	141803103	NM_010727.3	Lnx1	NP_034857.2	ILMN_2597124	005310403	S	2342	AGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACA	5	-	74988758-74988807	5qC3.3	Mus musculus ligand of numb-protein X 1 (Lnx1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process by which a ubiquitin moiety, or multiple moieties, are covalently attached to the target protein, thereby initiating the degradation of that protein [goid 42787] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	Lnx	Lnx
Mus musculus	Riken	ILMN_206812	ILMN_206812	D930002G22RIK	ri|D930002G22|PX00200J24|AK086071|2252					AK086071	D930002G22Rik		ILMN_2582871	001050725	S	1936	GTCTAGCCTGGGCATCTGCCTCTTGAGACACTGGTAAGAACTTGGTGCTG										
Mus musculus	RefSeq	ILMN_224915	ILMN_224915	SALL3	NM_178280.3	NM_178280.3		20689	54144639	NM_178280.3	Sall3	NP_840064.2	ILMN_3001398	000620112	S	6698	CAGGAACAAGCGAGTGCTCACAGATACCACGCTCAGCAGACTTCCCGTGG	18	-	81163253-81163302	18qE3	Mus musculus sal-like 3 (Drosophila) (Sall3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of an interneuron residing in the olfactory bulb, from its initial commitment, to the fully functional differentiated cell [goid 21891] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Spalt; B130022O04Rik; Msal-1; Sal; Msal; Salt	Spalt; B130022O04Rik; Msal-1; Sal; Msal; Salt
Mus musculus	RefSeq	ILMN_201587	ILMN_224915	SALL3	NM_178280.3	NM_178280.3		20689	54144639	NM_178280.3	Sall3	NP_840064.2	ILMN_1252794	003120008	S	4575	GTTCTCTAGTGTGGTCTGTAGCCCCGCGGTCGACTGGGAACAAGTTACAG	18	-	81165376-81165425	18qE3	Mus musculus sal-like 3 (Drosophila) (Sall3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of an interneuron residing in the olfactory bulb, from its initial commitment, to the fully functional differentiated cell [goid 21891] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Spalt; B130022O04Rik; Msal-1; Sal; Msal; Salt	Spalt; B130022O04Rik; Msal-1; Sal; Msal; Salt
Mus musculus	RefSeq	ILMN_213215	ILMN_213215	OLFR1226	NM_146967.1	NM_146967.1		258969	22128992	NM_146967.1	Olfr1226	NP_667178.1	ILMN_2634806	004780689	S	879	GAATGCTATTAGGAAACTGTGGAAGAGATGGAAAGTGGTTTCTGGTGACA	2	-	89033261-89033310	2qE1	Mus musculus olfactory receptor 1226 (Olfr1226), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC123542; MGC123543; MOR233-2	MGC123542; MGC123543; MOR233-2
Mus musculus	RefSeq	ILMN_223446	ILMN_229916	4930417G10RIK	NM_029107.2	NM_029107.2		74855	142378242	NM_029107.2	4930417G10Rik	NP_083383.1	ILMN_1222994	005960113	S	2487	CACCCACCCACAAAAGCCACCAGTGAAATCAAGCCCCAGAAACCTGACAG	12	-	4720907-4720956	12qA1.1	Mus musculus RIKEN cDNA 4930417G10 gene (4930417G10Rik), mRNA.					
Mus musculus	MEEBO	ILMN_211616	ILMN_211616	GMPR2	scl000307.1_98	NM_177992.1			29568081	NM_177992.1	Gmpr2		ILMN_2617691	005420324	S	1645	GTAGGATCCAGGGAAATGAATGTTATTCTCAGGAAGCAGCGACGCCAGCC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [evidence ISA]; The chemical reactions and pathways resulting in the breakdown of GMP, guanosine monophosphate [goid 46038] [evidence ISA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NH3 + NADP+ = guanosine 5'-phosphate + NADPH + H+ [goid 3920] [evidence ISA]		
Mus musculus	RefSeq	ILMN_222789	ILMN_222789	NDUFA6	NM_025987.1	NM_025987.1		67130	13385491	NM_025987.1	Ndufa6	NP_080263.1	ILMN_2898406	004210600	S	122	AGCTCTACCGCGCTTGGTATCGGGAGGTGCCGAACACCGTGCACTTAATG	15	-	82181515-82181524:82184511-82184550	15qE1	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6 (B14) (Ndufa6), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		2700038D15Rik; B230217P19Rik; 14kDa	2700038D15Rik; B230217P19Rik; 14kDa
Mus musculus	RefSeq	ILMN_199747	ILMN_252205	LOC436470	XM_908546.2	XM_908546.2		436470	94397452	XM_908546.2	LOC436470	XP_913639.1	ILMN_1217947	005570762	S	221	CCCTGGGAAAAGCCCTGCACTCCTGATAGCCATAAGTTTGGTGTCCAATA					PREDICTED: Mus musculus similar to T-cell receptor alpha chain precursor V-J-C region (4I) - mouse (fragment) (LOC436470), mRNA.					
Mus musculus	RefSeq	ILMN_196414	ILMN_196414	4933428L19RIK	XM_130015.2	XM_130015.2			38074478	XM_130015.2	4933428L19Rik		ILMN_2524067	006940450	S	684	CATTGAGGGCGACGTGGGGGAGTTTATTATCGCTGCTGCCCAAGATGGGG										
Mus musculus	RefSeq	ILMN_211547	ILMN_211547	NXT1	NM_019761.4	NM_019761.4		56488	32129283	NM_019761.4	Nxt1	NP_062735.3	ILMN_2975041	006370097	S	488	CAGCCTGTCCATGATGACGCTACACCAAGCCAGACCACCGTGCTTGTGGT	2	+	148367016-148367065	2qG3	Mus musculus NTF2-related export protein 1 (Nxt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of RNA from the nucleus to the cytoplasm [goid 6405] [evidence IDA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [evidence IDA]	1110001N02Rik	1110001N02Rik
Mus musculus	RefSeq	ILMN_209645	ILMN_209645	1810020G14RIK	NM_025461.2	NM_025461.2		66272	31541846	NM_025461.2	1810020G14Rik	NP_079737.1	ILMN_2970900	002450082	S	1464	ACTCAAGGCAGGGACTGATGCATTGGCCATGGAGGAACATGGCTTCCTGG	12	-	82390035-82390084	12qD1	Mus musculus RIKEN cDNA 1810020G14 gene (1810020G14Rik), mRNA.				MGC118423; BB388670; 1810055I05Rik	MGC118423; BB388670; 1810055I05Rik
Mus musculus	RefSeq	ILMN_209645	ILMN_209645	1810020G14RIK	NM_025461.2	NM_025461.2		66272	31541846	NM_025461.2	1810020G14Rik	NP_079737.1	ILMN_2970899	002370561	S	1552	GGCCGAGGATCACTCCGGATAGCACCATCTACAATGGGCAGTTCTCCTAC	12	-	82389947-82389996	12qD1	Mus musculus RIKEN cDNA 1810020G14 gene (1810020G14Rik), mRNA.				MGC118423; BB388670; 1810055I05Rik	MGC118423; BB388670; 1810055I05Rik
Mus musculus	RefSeq	ILMN_202880	ILMN_310994	LOC100047073	XM_001477050.1	XM_001477050.1		100047073	149271284	XM_001477050.1	LOC100047073	XP_001477100.1	ILMN_2553025	001070370	S	405	GGCTGTCCCTTAGGTCTACAGTTGGTGCTCCTGGCTTTACTGGCAGGCTG					PREDICTED: Mus musculus hypothetical protein LOC100047073 (LOC100047073), mRNA.					
Mus musculus	RefSeq	ILMN_236895	ILMN_236895	LSM12	NM_172947.1	NM_172947.1		268490	31711989	NM_172947.1	Lsm12	NP_766535.1	ILMN_2963580	000620494	S	640	AGTCCACAAACAGGGAGGACTCTTCCAGCATCCAGCCACAGCGATGGTGG	11	-	101980113-101980162	11qD	Mus musculus LSM12 homolog (S. cerevisiae) (Lsm12), mRNA.				1110059P07; 1110032E16Rik; 2600001B17Rik	1110059P07; 1110032E16Rik; 2600001B17Rik
Mus musculus	RefSeq	ILMN_188264	ILMN_226086	C130069I09RIK	XM_908012.2	XM_908012.2		233026	94379883	XM_908012.2	C130069I09Rik	XP_913105.1	ILMN_1241263	004670154	S	6470	TTAGATCATGAACAAAGTGAAAAATTGATGTCATATATTGAAAAGATTTT				7qA3	PREDICTED: Mus musculus RIKEN cDNA C130069I09 gene, transcript variant 7 (C130069I09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_259312	ILMN_259312	SENP7	NM_001003972.1	NM_001003972.1		66315	51593106	NM_001003972.1	Senp7	NP_001003972.1	ILMN_3098927	002060154	A	658	CCCACCTGTAACTGAGGCCAGTTTGAGTGATACAGCCAACCTGAAATCAG	16	+	56123955-56124004	16qC1.1	Mus musculus SUMO1/sentrin specific peptidase 7 (Senp7), transcript variant 3, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	6030449K19Rik; mKIAA1707; AI790676; 2900036C23Rik; 2810413I22Rik; 2410152H17Rik	6030449K19Rik; mKIAA1707; AI790676; 2900036C23Rik; 2810413I22Rik; 2410152H17Rik
Mus musculus	RefSeq	ILMN_207503	ILMN_259312	SENP7	NM_001003972.1	NM_001003972.1		66315	51593106	NM_001003972.1	Senp7	NP_001003972.1	ILMN_1260543	004060605	I	915	GCAGATGCTGACAGCCTTGGGACCTTCCAGTGACAGATAAACTCTCTTGC	16	+	56126382-56126431	16qC1.1	Mus musculus SUMO1/sentrin specific peptidase 7 (Senp7), transcript variant 3, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	6030449K19Rik; mKIAA1707; AI790676; 2900036C23Rik; 2810413I22Rik; 2410152H17Rik	6030449K19Rik; mKIAA1707; AI790676; 2900036C23Rik; 2810413I22Rik; 2410152H17Rik
Mus musculus	RefSeq	ILMN_245343	ILMN_245343	FERT2	NM_001037997.1	NM_001037997.1		14158	83921583	NM_001037997.1	Fert2	NP_001033086.1	ILMN_3080371	004290524	I	2867	TGTGGGCTGCTGTCTTCTGCCACAGGCCCTCCTCGGTTGGTGCTATAAAC	17	+	64488706-64488755	17qE1.1	Mus musculus fer (fms/fps related) protein kinase, testis specific 2 (Fert2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	C330004K01Rik; AV082135; Fer; Fert	C330004K01Rik; AV082135; Fer; Fert
Mus musculus	RefSeq	ILMN_202631	ILMN_245343	FERT2	NM_001037997.1	NM_001037997.1		14158	83921583	NM_001037997.1	Fert2	NP_001033086.1	ILMN_2551092	007160035	S	322	GAAGACACATGCAGAGGACTTGAACTCTGGACCCTTGCACAGGCTCACCA	17	+	64256689-64256738	17qE1.1	Mus musculus fer (fms/fps related) protein kinase, testis specific 2 (Fert2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	C330004K01Rik; AV082135; Fer; Fert	C330004K01Rik; AV082135; Fer; Fert
Mus musculus	RefSeq	ILMN_212872	ILMN_245343	FERT2	NM_001037997.1	NM_001037997.1		14158	83921583	NM_001037997.1	Fert2	NP_001033086.1	ILMN_2631205	004480482	S	2658	TGTTCCACTTTAAACTATGTTAAAGGCAAATCTATTCAAGAAATAAATAG	17	+	64488497-64488546	17qE1.1	Mus musculus fer (fms/fps related) protein kinase, testis specific 2 (Fert2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	C330004K01Rik; AV082135; Fer; Fert	C330004K01Rik; AV082135; Fer; Fert
Mus musculus	RefSeq	ILMN_245343	ILMN_245343	FERT2	NM_001037997.1	NM_001037997.1		14158	83921583	NM_001037997.1	Fert2	NP_001033086.1	ILMN_3159840	003930097	A	2035	GCTGAAGCTGAAGCAGTTGGTGAGATTTTCCTTGGACGTTGCTGCTGGCA	17	+	64428253-64428302	17qE1.1	Mus musculus fer (fms/fps related) protein kinase, testis specific 2 (Fert2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	C330004K01Rik; AV082135; Fer; Fert	C330004K01Rik; AV082135; Fer; Fert
Mus musculus	RefSeq	ILMN_232085	ILMN_232085	EG546347	NM_001034103.1	NM_001034103.1		546347	77539459	NM_001034103.1	EG546347	NP_001029275.1	ILMN_3006164	001740717	S	330	GGCCCAAGGTGCCTACCACGAAGAGCAAGAAAACGCTGGGAAGGATGCTG	X	+	89735617-89735624:89735798-89735839	XqC2	Mus musculus predicted gene, EG546347 (EG546347), mRNA.				MGC118250	MGC118250
Mus musculus	RefSeq	ILMN_187236	ILMN_253392	PLCL2	NM_013880.2	NM_013880.2		224860	141802121	NM_013880.2	Plcl2	NP_038908.1	ILMN_1228330	000380594	S	3937	GGCGCTGCAGAGGATTTGTTGGCGTGCTTGCTGAGCCATATTTACTAAGC	17	+	50827575-50827624	17qC	Mus musculus phospholipase C-like 2 (Plcl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	PRIP-2; Plce2; mKIAA1092; PLC-L2	PRIP-2; Plce2; mKIAA1092; PLC-L2
Mus musculus	Riken	ILMN_205785	ILMN_205785	D230011F20RIK	ri|D230011F20|PX00188M15|AK051856|2453					AK051856	D230011F20Rik		ILMN_1254992	002650307	S	2195	TGGGGAACTGGAAGCAAACCATACTCCTATTGGCTACACCAGGGAAGGAC										
Mus musculus	RefSeq	ILMN_210220	ILMN_210220	DNASE2B	NM_019957.3	NM_019957.3		56629	142382507	NM_019957.3	Dnase2b	NP_064341.2	ILMN_2618540	007380239	S	2529	CCAGGTGGAGAGGGTCAAAACTGATCCAGTGATACAAGGAAGGACAACCA	3	-	146244057-146244106	3qH2	Mus musculus deoxyribonuclease II beta (Dnase2b), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks [goid 4520] [evidence IDA]; Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products [goid 4531] [evidence IEA]	DnaseIIb; Dlad; AI526873	DnaseIIb; Dlad; AI526873
Mus musculus	RefSeq	ILMN_210220	ILMN_210220	DNASE2B	NM_019957.3	NM_019957.3		56629	142382507	NM_019957.3	Dnase2b	NP_064341.2	ILMN_2603377	004050288	S	510	CCTGTACCTGGACTCCACAAGACAAACCTGGAACAAGAGCCTCTACCTGA	3	-	146256434-146256483	3qH2	Mus musculus deoxyribonuclease II beta (Dnase2b), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks [goid 4520] [evidence IDA]; Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products [goid 4531] [evidence IEA]	DnaseIIb; Dlad; AI526873	DnaseIIb; Dlad; AI526873
Mus musculus	RefSeq	ILMN_197998	ILMN_317114	PEA15B	XR_035389.1	XR_035389.1		231332	149253803	XR_035389.1	Pea15b		ILMN_2530121	007570167	S	150	CCACACCCCATGCTCTCGGCTCCAGAGGCATCACGTCAGAGTACAGGACT				5qC3.3	PREDICTED: Mus musculus phosphoprotein enriched in astrocytes 15B (Pea15b), misc RNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IDA]	Interacting selectively with a mitogen-activated protein kinase [goid 51019] [evidence IPI]		
Mus musculus	MEEBO	ILMN_190612	ILMN_190612	4930430E16RIK	scl41787.1.1_9				39930452	NM_028672	4930430E16Rik		ILMN_2645020	007570121	S	1542	AGCTCGAACCCAAAGCCCAGGCCTCATGAATGCAGCCCACCGATGCCCAC										
Mus musculus	MEEBO	ILMN_190612	ILMN_190612	4930430E16RIK	scl41787.1.1_9				39930452	NM_028672	4930430E16Rik		ILMN_2471726	003890692	S	14	GCTGAGAGTTCACTGAAAAAGCATCCAAAGTGGCCAAAAACCTGAGGCCG										
Mus musculus	Riken	ILMN_204438	ILMN_204438	A730049K22RIK	ri|A730049K22|PX00150F14|AK043033|3643					AK043033	A730049K22Rik		ILMN_2564977	004900338	S	3115	CACGTGCAGCTGGATAACCTGGATGGCTTGCTGCTCATCCCTGAGCCTCA										
Mus musculus	RefSeq	ILMN_197292	ILMN_197292	LOC218452	XM_147780.2	XM_147780.2			38075027	XM_147780.2	LOC218452		ILMN_2527612	006480475	S	832	CAAAGGCAGGGAGCAGATGTTGCTAGTGGTTCTGTTGGCTGTGAGTGCTC										
Mus musculus	RefSeq	ILMN_199593	ILMN_199593	LOC383706	XM_357197.1	XM_357197.1			38074844	XM_357197.1	LOC383706		ILMN_2535779	003400452	S	221	AGAGCAAGAAGTACAAGCCCCTGGACCTGCGACCCAAAAGGTCTAGAGCC										
Mus musculus	RefSeq	ILMN_220916	ILMN_220916	TAC1	NM_009311.2	NM_009311.2		21333	118130452	NM_009311.2	Tac1	NP_033337.1	ILMN_1251000	006580255	S	265	CGCCCGAAGACCCAAGCCTCAGCAGTTCTTTGGATTAATGGGCAAGCGGG	6	+	7506725-7506774	6qA1	Mus musculus tachykinin 1 (Tac1), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor [goid 7217] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]		PPT-A; NK-1; NK1; 4930528L02Rik; MGC151458; SP; Nkna	PPT-A; NK-1; NK1; 4930528L02Rik; MGC151458; SP; Nkna
Mus musculus	RefSeq	ILMN_223765	ILMN_248475	CCDC57	NM_027745.1	NM_027745.1		71276	58037236	NM_027745.1	Ccdc57	NP_082021.1	ILMN_1226713	006480468	S	3172	CAGCAGCGGCCCTCTAGGATCCGCAACTACAACCTCAAGGACTAAGTCTC	11	-	120688024-120688029:120688030-120688073	11qE2	Mus musculus coiled-coil domain containing 57 (Ccdc57), mRNA.				4933434G05Rik	4933434G05Rik
Mus musculus	RefSeq	ILMN_258004	ILMN_258004	POLE3	NM_021498.2	NM_021498.2		59001	31981173	NM_021498.2	Pole3	NP_067473.2	ILMN_2840296	002120014	S	466	GTAGGCAGACTGTGGCGTGGTGGAGGGGACCCTGAGATCCTGAGACATGT	4	-	62184918-62184967	4qB3	Mus musculus polymerase (DNA directed), epsilon 3 (p17 subunit) (Pole3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	YBL1; 1810034K18Rik	YBL1; 1810034K18Rik
Mus musculus	RefSeq	ILMN_188963	ILMN_258004	POLE3	NM_021498.2	NM_021498.2		59001	31981173	NM_021498.2	Pole3	NP_067473.2	ILMN_1247613	006650672	S	109	AAGGAGGCCCGAAGCGCCATCTCCCGCGCCGCCAGTGTCTTCGTTTTGTA	4	-	62185795-62185844	4qB3	Mus musculus polymerase (DNA directed), epsilon 3 (p17 subunit) (Pole3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	YBL1; 1810034K18Rik	YBL1; 1810034K18Rik
Mus musculus	RefSeq	ILMN_199127	ILMN_227262	LOC432555	XM_979178.1	XM_979178.1		432555	94391495	XM_979178.1	LOC432555	XP_984272.1	ILMN_1248122	006860450	S	1502	TCTCCATATTGGGAGGAGTCCGTGGGCAAAGTGTTTCCAGTTGGTCCAGG				11qB1.2	PREDICTED: Mus musculus similar to T-cell specific GTPase (LOC432555), mRNA.					
Mus musculus	Riken	ILMN_203336	ILMN_203336	4932702M20RIK	ri|4932702M20|PX00019H03|AK030138|3841					AK030138	4932702M20Rik		ILMN_2556530	002230220	S	3388	CCCTAGTCTTCAATCTCACCCGTGTAAGCAGGAAGTGCAAAGCGAGCAGC										
Mus musculus	RefSeq	ILMN_200326	ILMN_200326	LOC386238	XM_359133.1	XM_359133.1			38081322	XM_359133.1	LOC386238		ILMN_2538368	004490136	S	157	CAGTTGCAAGCTGCCATGTGGGTCCTCTACAAGAGATTGCAGGCTTGTAC										
Mus musculus	RefSeq	ILMN_201185	ILMN_201185	LOC384907	XM_357935.1	XM_357935.1			38089681	XM_357935.1	LOC384907		ILMN_2541392	002450121	S	734	TCGCCATAGTAGCGTCAGTGCTACACATGATAGAGAGCGTGCCCCCTTCA										
Mus musculus	RefSeq	ILMN_201440	ILMN_201440	LOC385167	XM_358097.1	XM_358097.1			38093866	XM_358097.1	LOC385167		ILMN_2542300	003830551	S	128	CCCCAAGTAACAATGGCTGCTGGGCAATTCAGGAGCTGCAAAGTCTCTGG										
Mus musculus	MEEBO	ILMN_193496	ILMN_193496	ADAM5	scl35005.17.1_58				33469064	NM_007401	Adam5		ILMN_1253590	002750019	S	18	GCTCTTGATACCTGGGTTCCAGGACACCGTTGTGGCTATCTCTAAGGAAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211218	ILMN_259897	ANKRD13A	NM_026718.2	NM_026718.2		68420	61651674	NM_026718.2	Ankrd13a	NP_080994.2	ILMN_2613696	002690201	S	2997	CTAACCCTCCTGTAAATACCTACTGCATAACAGCCCAACCCCTGGGGAAC	5	+	115255574-115255623	5qF	Mus musculus ankyrin repeat domain 13a (Ankrd13a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1100001D10Rik; MGC118502; ANKRD13; AU046136	1100001D10Rik; MGC118502; ANKRD13; AU046136
Mus musculus	Riken	ILMN_204887	ILMN_204887	FBXW2	ri|A530023H12|PX00140H04|AK040764|2261					AK040764	Fbxw2		ILMN_1244486	002970156	S	1797	CCCAACCAAAGGAGCCTAAGGAGGTTGCCGTGGGAAAGTGTAGACTCCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]			
Mus musculus	MEEBO	ILMN_214352	ILMN_214352	ACTL6A	scl072742.4_139	NM_183090.1			34147062	NM_183090.1	Actl6a		ILMN_2647102	000240021	S	1203	GTAGTTTCTCTAGGAACGGTAGTCTTTTCCCTGGCAAGAAGTGTGACAGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196387	ILMN_209983	MAPK1	NM_011949.3	NM_011949.3		26413	84579911	NM_011949.3	Mapk1	NP_036079.1	ILMN_1213055	001580719	S	4686	TCCCTAGGGTCACACCAGCTCACCTGCAGCTTGTTGCCTTTCTGTGCCGT	16	+	17047133-17047182	16qA3	Mus musculus mitogen-activated protein kinase 1 (Mapk1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IGI]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives [goid 19858] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]	Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IMP]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IDA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IMP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 16908] [evidence IDA]	C78273; PRKM2; MAPK2; ERK; p42mapk; AU018647; Erk2; AA407128; Prkm1; 9030612K14Rik; p41mapk	C78273; PRKM2; MAPK2; ERK; p42mapk; AU018647; Erk2; AA407128; Prkm1; 9030612K14Rik; p41mapk
Mus musculus	RefSeq	ILMN_209983	ILMN_209983	MAPK1	NM_011949.3	NM_011949.3		26413	84579911	NM_011949.3	Mapk1	NP_036079.1	ILMN_2601071	002570669	S	2551	TGCGGTGCCTCCAGACCCCCTCACTGCTCTCTGATGAGAAATATGCCTTG	16	+	17044998-17045047	16qA3	Mus musculus mitogen-activated protein kinase 1 (Mapk1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IGI]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives [goid 19858] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]	Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IMP]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IDA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IMP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 16908] [evidence IDA]	C78273; PRKM2; MAPK2; ERK; p42mapk; AU018647; Erk2; AA407128; Prkm1; 9030612K14Rik; p41mapk	C78273; PRKM2; MAPK2; ERK; p42mapk; AU018647; Erk2; AA407128; Prkm1; 9030612K14Rik; p41mapk
Mus musculus	MEEBO	ILMN_189921	ILMN_189921	1700013E18RIK	scl21364.2.1_9				31340897	NM_175176	1700013E18Rik		ILMN_1246954	001410100	S	1	CTACCTTCTCTGTCTGAGGAGCTCTGGGCCCTGTAAGCAATTTCTTAAGG										
Mus musculus	MEEBO	ILMN_189921	ILMN_189921	1700013E18RIK	scl21364.2.1_9				31340897	NM_175176	1700013E18Rik		ILMN_2713438	002000059	S	1779	GGTCATTGCTACTGCCAGAGCAATCGGCTGGATGATTCTGGAAGGATTCT										
Mus musculus	RefSeq	ILMN_223377	ILMN_223377	CXCL1	NM_008176.1	NM_008176.1		14825	6680108	NM_008176.1	Cxcl1	NP_032202.1	ILMN_2763245	003610082	S	800	CTGTTTCTCCTGGTCTCGTCTCGCTCGGGACAGAGACGTTCAAAGGACTG	5	+	91968231-91968280	5qE1	Mus musculus chemokine (C-X-C motif) ligand 1 (Cxcl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	Scyb1; KC; Mgsa; N51; Gro1; gro; Fsp	Scyb1; KC; Mgsa; N51; Gro1; gro; Fsp
Mus musculus	MEEBO	ILMN_219805	ILMN_219805	9330169L03RIK	scl077226.2_38	NM_175253.2			31340738	NM_175253.2	9330169L03Rik		ILMN_1242573	006770451	S	2535	GCTTATGCAAATGAGCAGACTTTCATAAGAGGCAGATTCAATCTGTGTGC										
Mus musculus	MEEBO	ILMN_222755	ILMN_222755	COL5A3	scl36160.67.1_2	NM_016919.1			8393172	NM_016919.1	Col5a3		ILMN_2754285	006130398	S	5429	CCTTGTAGGGGGAGAGTGTGGAGAGCCCAGCTCCCTCTGTCTGTTCACCC						A collagen heterotrimer containing type V alpha chains; [alpha1(V)]2alpha2(V) and alpha1(V)alpha2(V)alpha3(V) trimers have been observed; type V collagen triple helices associate to form fibrils [goid 5588] [evidence ISS]; A collagen heterotrimer containing type V alpha chains; [alpha1(V)]2alpha2(V) and alpha1(V)alpha2(V)alpha3(V) trimers have been observed; type V collagen triple helices associate to form fibrils [goid 5588] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence ISS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence ISS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]		
Mus musculus	RefSeq	ILMN_219605	ILMN_219605	ARHGEF19	NM_172520.2	NM_172520.2		213649	142361383	NM_172520.2	Arhgef19	NP_766108.1	ILMN_1212875	004890224	S	2944	CCTGCTACTTTGTCCTCCAAGTAGCAAAGTGTCAGATCCAAGCAGGCTTG	4	+	140813024-140813073	4qD3	Mus musculus Rho guanine nucleotide exchange factor (GEF) 19 (Arhgef19), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	WGEF; 6430573B13Rik; 6030432F23	WGEF; 6430573B13Rik; 6030432F23
Mus musculus	RefSeq	ILMN_210190	ILMN_210190	TMEM69	NM_177670.3	NM_177670.3		230657	142361305	NM_177670.3	Tmem69	NP_808338.1	ILMN_2603124	004610576	S	79	CCCCCTCAACTATAAAAATATATGAATCGGAATTGCATTTTCCCTGGACA	4	-	116227435-116227484	4qD1	Mus musculus transmembrane protein 69 (Tmem69), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC118424; RP23-233B9.3; A630048M13Rik	MGC118424; RP23-233B9.3; A630048M13Rik
Mus musculus	RefSeq	ILMN_210190	ILMN_210190	TMEM69	NM_177670.3	NM_177670.3		230657	142361305	NM_177670.3	Tmem69	NP_808338.1	ILMN_2652988	004220372	S	706	TAGTCACATTAATAATAGGTTTAGGGATAGCATTACACAATGAACTTTTC	4	-	116225770-116225819	4qD1	Mus musculus transmembrane protein 69 (Tmem69), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC118424; RP23-233B9.3; A630048M13Rik	MGC118424; RP23-233B9.3; A630048M13Rik
Mus musculus	RefSeq	ILMN_208877	ILMN_208877	GUCY1B3	NM_017469.3	NM_017469.3		54195	142386430	NM_017469.3	Gucy1b3	NP_059497.1	ILMN_1250403	003440435	S	2758	TTGCTTTAGCAAGTGTTTGGGGTCAAACTATGTCCAGGAACAAGGCTGGG	3	-	81836343-81836392	3qE3	Mus musculus guanylate cyclase 1, soluble, beta 3 (Gucy1b3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA];  [goid 16849] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	GC-S-beta-1	GC-S-beta-1
Mus musculus	RefSeq	ILMN_220662	ILMN_220662	LZIC	NM_026963.4	NM_026963.4		69151	146149121	NM_026963.4	Lzic	NP_081239.1	ILMN_1240544	000460148	S	1425	CTCCCTTCTTACGTGACCCCAGGCTTGTTGGACAGAGGGACATTGTTCAC				4qE2	Mus musculus leucine zipper and CTNNBIP1 domain containing (Lzic), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810030J04Rik; AW047580	1810030J04Rik; AW047580
Mus musculus	Riken	ILMN_201658	ILMN_201658	1500002C15RIK	ri|1500002C15|R000020A16|AK005108|1276					AK005108	1500002C15Rik		ILMN_1241587	002690131	S	987	CTCAGAAGGGTGCTCTCAGGTTTATCACAGGGTTGGACTCAATGGCCGAG										
Mus musculus	MEEBO	ILMN_187772	ILMN_187772	4930470O13RIK	scl44531.1_380						4930470O13Rik		ILMN_1235278	007320524	S	1	GGCTGCTGGCGTCTTGATCTGATGGCGGACGGGTGTATACAAGCCTTTAA										
Mus musculus	RefSeq	ILMN_221889	ILMN_221889	OLFR651	NM_146813.1	NM_146813.1		258809	22129230	NM_146813.1	Olfr651	NP_667024.1	ILMN_1230824	006040494	S	624	CTCAGATGTCATCCTGATTGCAGTATCCTACATCTTCATCCTCCGGGCAG	7	+	111702058-111702107	7qE3	Mus musculus olfactory receptor 651 (Olfr651), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR31-11	MOR31-11
Mus musculus	RefSeq	ILMN_208714	ILMN_229581	2900054J07RIK	XM_901075.2	XM_901075.2		72958	94395274	XM_901075.2	2900054J07Rik	XP_906168.1	ILMN_2588825	007100408	S	283	GAACGACGACCAGAGCCTTGGAATGTGAAGACACAGGCAAGTGTAGGCAC	13	+	68283535-68283584		PREDICTED: Mus musculus RIKEN cDNA 2900054J07 gene, transcript variant 2 (2900054J07Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213485	ILMN_252703	HECTD3	NM_175244.3	NM_175244.3		76608	47271517	NM_175244.3	Hectd3	NP_780453.1	ILMN_2687372	000650328	S	3338	GCCTAGACGTTAAACTTCCTCTAAGGGTGGTGCACACCCTTCCATTACCC	4	+	116676668-116676717	4qD1	Mus musculus HECT domain containing 3 (Hectd3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-419D6.4; AI467540; AW743312; 1700064K09Rik	RP23-419D6.4; AI467540; AW743312; 1700064K09Rik
Mus musculus	RefSeq	ILMN_213485	ILMN_252703	HECTD3	NM_175244.3	NM_175244.3		76608	47271517	NM_175244.3	Hectd3	NP_780453.1	ILMN_1231383	004920176	S	4466	GCAAGTGTCTTCTTGGTGATGAATTATACTTCTAAGGGGATCCACTGAAA	4	+	116677796-116677845	4qD1	Mus musculus HECT domain containing 3 (Hectd3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-419D6.4; AI467540; AW743312; 1700064K09Rik	RP23-419D6.4; AI467540; AW743312; 1700064K09Rik
Mus musculus	RefSeq	ILMN_188578	ILMN_311925	SDCBP	NM_001098227.1	NM_001098227.1		53378	148277639	NM_001098227.1	Sdcbp	NP_001091697.1	ILMN_2453874	002750347	S	2485	TATAATTCTCAGTTTGATTATCCACCTTGCTTTCTGGACTTGGTTCTGAA				4qA1	Mus musculus syndecan binding protein (Sdcbp), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-5 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-3 [goid 5895] [evidence IMP]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Interacting selectively with the interleukin-5 receptor [goid 5137] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sycl	Sycl
Mus musculus	RefSeq	ILMN_188578	ILMN_311925	SDCBP	NM_001098227.1	NM_001098227.1		53378	148277639	NM_001098227.1	Sdcbp	NP_001091697.1	ILMN_2625393	001770328	S	1837	AGAATAAATTTTGGAGTCTCTTTTTCACTCTAGTGGGTAATATCTAATTT				4qA1	Mus musculus syndecan binding protein (Sdcbp), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-5 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-3 [goid 5895] [evidence IMP]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Interacting selectively with the interleukin-5 receptor [goid 5137] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sycl	Sycl
Mus musculus	RefSeq	ILMN_188578	ILMN_311925	SDCBP	NM_001098227.1	NM_001098227.1		53378	148277639	NM_001098227.1	Sdcbp	NP_001091697.1	ILMN_2751539	003390021	S	761	AGTAAAAGATAGTTCTGCTGCCAGAAACGGCCTCCTCACTGATCACCACA				4qA1	Mus musculus syndecan binding protein (Sdcbp), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-5 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-3 [goid 5895] [evidence IMP]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Interacting selectively with the interleukin-5 receptor [goid 5137] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sycl	Sycl
Mus musculus	RefSeq	ILMN_188578	ILMN_311925	SDCBP	NM_001098227.1	NM_001098227.1		53378	148277639	NM_001098227.1	Sdcbp	NP_001091697.1	ILMN_1258369	002510463	S	434	CCGTGAAGTTATTTTGTGTAAGGATCAAGATGGAAAAATTGGGCTCAGAC				4qA1	Mus musculus syndecan binding protein (Sdcbp), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-5 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-3 [goid 5895] [evidence IMP]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Interacting selectively with the interleukin-5 receptor [goid 5137] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sycl	Sycl
Mus musculus	RefSeq	ILMN_239137	ILMN_239137	TRPM3	NM_001035244.1	NM_001035244.1		226025	78214535	NM_001035244.1	Trpm3	NP_001030321.1	ILMN_3025252	001510687	I	3410	AATAGCCCTTGAGTGTATCTTCAGGTATGTCCTTCCTACGACAAGAATGG	19	+	23000736-23000785	19qB	Mus musculus transient receptor potential cation channel, subfamily M, member 3 (Trpm3), transcript variant 7, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence ISA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISA]	MLSN2; LTRPC3; 6330504P12Rik; AU018608; B930001P07Rik; 9330180E14	MLSN2; LTRPC3; 6330504P12Rik; AU018608; B930001P07Rik; 9330180E14
Mus musculus	RefSeq	ILMN_239137	ILMN_239137	TRPM3	NM_001035244.1	NM_001035244.1		226025	78214535	NM_001035244.1	Trpm3	NP_001030321.1	ILMN_3098069	001050292	A	1194	CCTCCTGTACCAGTCGTGGTCTGTGATGGGAGTGGACGGGCATCCGACAT	19	+	22841213-22841262	19qB	Mus musculus transient receptor potential cation channel, subfamily M, member 3 (Trpm3), transcript variant 7, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence ISA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISA]	MLSN2; LTRPC3; 6330504P12Rik; AU018608; B930001P07Rik; 9330180E14	MLSN2; LTRPC3; 6330504P12Rik; AU018608; B930001P07Rik; 9330180E14
Mus musculus	RefSeq	ILMN_211162	ILMN_211162	MRCL	NM_181549.2	NM_181549.2		353287	31581539	NM_181549.2	Mrcl	NP_853527.1	ILMN_2809931	002750176	S	2119	CACCCAGACCGCCAGAAGCCAGGAAGCAGAGGGTGGATGAAAGCAAAAGG	8	-	113585120-113585139:113586192-113586221	8qE1	Mus musculus mannose receptor-like precursor (Mrcl), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213540	ILMN_213540	TSC22D4	NM_023910.5	NM_023910.5		78829	75750500	NM_023910.5	Tsc22d4	NP_076399.4	ILMN_2638061	000450243	S	1710	AGACCTGGCAGAGCGGAACGCTGCATTGGAGCAGGAGAATGGATTGCTGC	5	+	138200363-138200412	5qG2	Mus musculus TSC22 domain family, member 4 (Tsc22d4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI415410; 1700023B23Rik; 0610009M14Rik; Thg-1pit; Tilz2	AI415410; 1700023B23Rik; 0610009M14Rik; Thg-1pit; Tilz2
Mus musculus	RefSeq	ILMN_215792	ILMN_215792	GNG11	NM_025331.2	NM_025331.2		66066	40254516	NM_025331.2	Gng11	NP_079607.1	ILMN_1251233	007050167	S	530	GGGCAGCTGTGTCATTTCATAAGTAACTCTGGGGGAGGGAAATTCTGTTC	6	+	3958139-3958160:3958161-3958188	6qA1	Mus musculus guanine nucleotide binding protein (G protein), gamma 11 (Gng11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	0610037B21Rik	0610037B21Rik
Mus musculus	RefSeq	ILMN_209491	ILMN_209491	DDT	NM_010027.1	NM_010027.1		13202	6753617	NM_010027.1	Ddt	NP_034157.1	ILMN_2596297	001990731	S	381	GAAAGGAACTGTCATGACATTTCTGTGACGGAAACAAAGAACCCAGGGTG	10	-	75234156-75234178:75234179-75234205	10qC1	Mus musculus D-dopachrome tautomerase (Ddt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: D-dopachrome = 5,6-dihydroxyindole + CO2 [goid 33981] [evidence IEA]	C78655	C78655
Mus musculus	RefSeq	ILMN_223707	ILMN_223707	SOHLH2	NM_028937.2	NM_028937.2		74434	141802936	NM_028937.2	Sohlh2	NP_083213.1	ILMN_2767951	001240369	S	2015	TTCCATCATCATCCAAACTAAGATAAGCAGGCTATAAGGAGCGGCAGCCC	3	+	55013546-55013595	3qC	Mus musculus spermatogenesis and oogenesis specific basic helix-loop-helix 2 (Sohlh2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	4933406N12Rik; AI413378	4933406N12Rik; AI413378
Mus musculus	MEEBO	ILMN_188109	ILMN_188109	SCL00093.1_86	scl00093.1_86	AK075730.1			26096528	AK075730.1	scl00093.1_86		ILMN_2449867	007000544	S	5	GGCAGGGAGTAAGCGCCATGTTCTCCCAGGACTTCTTCCTGGCTATCATC										
Mus musculus	MEEBO	ILMN_219661	ILMN_219661	MCCC2	scl078038.2_5	XM_127493.3			38075050	XM_127493.3	Mccc2		ILMN_1259582	002510075	S	1596	GCTCGAATATTTGGGTACCCCGTTGGCATCATTGGAAACAATGGAGTTTT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + 3-methylcrotonyl-CoA + HCO3- = ADP + phosphate + 3-methylglutaconyl-CoA [goid 4485] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218089	ILMN_218089	CCKBR	NM_007627.4	NM_007627.4		12426	145966837	NM_007627.4	Cckbr	NP_031653.1	ILMN_2691478	007510521	S	2294	CTCCCTTGATTGTCATCTGGGACCTAACCCTACTCCGGTGATGTAGTAGC				7qE3	Mus musculus cholecystokinin B receptor (Cckbr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with gastrin to initiate a change in cell activity [goid 15054] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CCK2R; CCKR-2	CCK2R; CCKR-2
Mus musculus	RefSeq	ILMN_222112	ILMN_222112	OLFR1188	NM_146919.1	NM_146919.1		258921	22129052	NM_146919.1	Olfr1188	NP_667130.1	ILMN_1221880	006550253	S	792	GCGACCAGTGGCAACCTTTCCCATGGATAAAGCAATAGCCGTGTTTTATA	2	+	88400419-88400468	2qD	Mus musculus olfactory receptor 1188 (Olfr1188), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR238-2; MGC123612; MGC123611	MOR238-2; MGC123612; MGC123611
Mus musculus	Riken	ILMN_204122	ILMN_204122	B130034E13RIK	ri|B130034E13|PX00158G13|AK045114|2113					AK045114	B130034E13Rik		ILMN_1258614	002260608	S	1800	GAATGTGGAGCGAGGTTGTCAGCCAGCAAACCCTGTGAGCCCTGTCTAGG										
Mus musculus	RefSeq	ILMN_214161	ILMN_214161	HABP2	NM_146101.1	NM_146101.1		226243	22122612	NM_146101.1	Habp2	NP_666213.1	ILMN_2644936	004760040	S	1868	GAGACTGCGAATCTGAGATCCCTGCTTGCCCCGCACCAGGAGATGTTTCC	19	+	56394381-56394430	19qD2	Mus musculus hyaluronic acid binding protein 2 (Habp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]	MGC28705; AI035669; HABP; PHBP; HGFAL	MGC28705; AI035669; HABP; PHBP; HGFAL
Mus musculus	RefSeq	ILMN_214161	ILMN_214161	HABP2	NM_146101.1	NM_146101.1		226243	22122612	NM_146101.1	Habp2	NP_666213.1	ILMN_2979190	004590025	S	1666	GCTTCCTGCGTAGCCAGGGATGTCCTGGGTCCATGCTCTAGACAGAGGCA	19	+	56394179-56394228	19qD2	Mus musculus hyaluronic acid binding protein 2 (Habp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]	MGC28705; AI035669; HABP; PHBP; HGFAL	MGC28705; AI035669; HABP; PHBP; HGFAL
Mus musculus	RefSeq	ILMN_214161	ILMN_214161	HABP2	NM_146101.1	NM_146101.1		226243	22122612	NM_146101.1	Habp2	NP_666213.1	ILMN_1234797	001500592	S	685	CCACAAACCCTGGTGTTTCGTCAAGGTGAACAGTGAGAAGGTGAAATGGG	19	+	56387374-56387423	19qD2	Mus musculus hyaluronic acid binding protein 2 (Habp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]	MGC28705; AI035669; HABP; PHBP; HGFAL	MGC28705; AI035669; HABP; PHBP; HGFAL
Mus musculus	RefSeq	ILMN_260196	ILMN_260196	OLFR1418	NM_001011524.1	NM_001011524.1		258227	58372129	NM_001011524.1	Olfr1418	NP_001011524.1	ILMN_3160297	005810475	S	722	CCTGTTCTTCCCACCTGACGGTTGTCCTCCTGCAGTATGGATGCACAAGT	19	-	11929670-11929719	19qA	Mus musculus olfactory receptor 1418 (Olfr1418), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR266-5	MOR266-5
Mus musculus	RefSeq	ILMN_217869	ILMN_238011	RPL13A	NM_009438.3	NM_009438.3		22121	32129296	NM_009438.3	Rpl13a	NP_033464.2	ILMN_2707834	005340246	S	730	CTGTGGATAGAGGGGACATTAGAGAGCTGACAGCGCACCACCTGCATGAG	7	-	44993841-44993890	7qB4	Mus musculus ribosomal protein L13a (Rpl13a), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tstap198-7; MGC107571; 1810026N22Rik; tum-antigen	Tstap198-7; MGC107571; 1810026N22Rik; tum-antigen
Mus musculus	Riken	ILMN_204680	ILMN_204680	A230095E03RIK	ri|A230095E03|PX00130A19|AK039094|1081					AK039094	A230095E03Rik		ILMN_1239271	003060553	S	907	GGCAGAAAAAACATGCACTCCAGGAAAGGCAGCATCTCCAACAAATCTCC										
Mus musculus	RefSeq	ILMN_216189	ILMN_216189	SLC26A6	NM_134420.3	NM_134420.3		171429	133779000	NM_134420.3	Slc26a6	NP_599252.2	ILMN_2668261	002450241	S	2431	CTGACTTTGCTGCAGGAGACTGCCTACCTCTGGAGGTTGTGACAGGTCAC				9qF2	Mus musculus solute carrier family 26, member 6 (Slc26a6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IDA]; The directed movement of formate into, out of, within or between cells [goid 15724] [evidence IDA]	Catalysis of the transfer of chloride ions from one side of a membrane to the other [goid 15108] [evidence IDA]; Catalysis of the transfer of formate from one side of the membrane to the other. Formate is also known as methanoate, the anion HCOO- derived from methanoic (formic) acid [goid 15499] [evidence IDA];  [goid 15380] [evidence IDA]	CFEX; Pat1; B930010B04Rik	CFEX; Pat1; B930010B04Rik
Mus musculus	MEEBO	ILMN_189684	ILMN_189684	4930487H11RIK	scl16698.3.1_7						4930487H11Rik		ILMN_2463474	004250348	S	18	CAACAGCAGACATTTCCAGCGTGTCAGCCCTTGGTTTGCTGCTCTACGTG										
Mus musculus	MEEBO	ILMN_187538	ILMN_187538	MACF1	scl0011426.1_178				51709447	XM_110503	Macf1		ILMN_2744146	000110563	S	8841	GAGAAGCGCCGCTCCCTGCTGGAAATACTGAATAGTGCTGCTGACATTCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane [goid 6620] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_187538	ILMN_187538	MACF1	scl0011426.1_178				51709447	XM_110503	Macf1		ILMN_2444984	004640528	S	20	ATAAAGTCAGCTGACCAAGTGACCACAGAGGGGCTGTTTGGGGCTCCTGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane [goid 6620] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199119	ILMN_199119	LOC380688	XM_358404.1	XM_358404.1			38091309	XM_358404.1	LOC380688		ILMN_1212684	001980292	S	82	GAGCCGCAGCAGAATCAGCAATGTTGGCCTCCTTGGAACACCTCCAGACG										
Mus musculus	Riken	ILMN_202690	ILMN_202690	IMPG1	ri|A930015H12|PX00066O20|AK020862|797					AK020862	Impg1		ILMN_1259782	004780139	S	1	GAGCACCTTCATAGGGTAAACCAGGGAGGTCGTCTGTACTCAGCCGGCAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185247	ILMN_233449	NEU1	NM_010893.2	NM_010893.2		18010	24496769	NM_010893.2	Neu1	NP_035023.2	ILMN_2708906	002350091	S	1568	CGAACTCAGGGAACTGAGAAGGCCCGGTGTCCTAGGGTACAAAGGCAGGT	17	+	35071362-35071411	17qB1	Mus musculus neuraminidase 1 (Neu1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates [goid 4308] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Aglp; AA407316; G9; AA407268; Neu-1; Apl; Bat7; Bat-7; Map-2	Aglp; AA407316; G9; AA407268; Neu-1; Apl; Bat7; Bat-7; Map-2
Mus musculus	MEEBO	ILMN_189268	ILMN_189268	3300002P13RIK	scl0070230.1_289						3300002P13Rik		ILMN_1215180	002450564	S	5	CACCACTCCCCCAATGCTGGATCAGGTTTCTGTCTCTGAAGCTGGACTGC										
Mus musculus	RefSeq	ILMN_214939	ILMN_214939	MTMR2	NM_023858.2	NM_023858.2		77116	134053953	NM_023858.2	Mtmr2	NP_076347.2	ILMN_1246126	002470014	S	3761	GCTCTGGGTGGGATATTATATAAGGTGGAACCCCCGGATGAAACCTCAGG	9	+	13609378-13609426:13609819-13609819	9qA1	Mus musculus myotubularin related protein 2 (Mtmr2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IDA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence IPI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	6030445P13Rik	6030445P13Rik
Mus musculus	RefSeq	ILMN_214939	ILMN_214939	MTMR2	NM_023858.2	NM_023858.2		77116	134053953	NM_023858.2	Mtmr2	NP_076347.2	ILMN_2653681	006180019	S	2332	CTGGTGCTGTGCGAGGAACGCTGACTGTCACAAGTTACAGGTTATATTTC	9	+	13593055-13593104	9qA1	Mus musculus myotubularin related protein 2 (Mtmr2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IDA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence IPI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	6030445P13Rik	6030445P13Rik
Mus musculus	MEEBO	ILMN_190730	ILMN_190730	GDAP4	scl41267.1.1_96						Gdap4		ILMN_2472765	004730228	S	18	AAAGTGAGGTGTGGCTCCACGCTACCACTTGCCTAACACGCATGACGCCC										
Mus musculus	RefSeq	ILMN_220029	ILMN_220029	CRIPT	NM_019936.2	NM_019936.2		56724	142370678	NM_019936.2	Cript	NP_064320.1	ILMN_1223929	001090450	S	659	GTCTACTCAACATTATCCATATGATTCTTACCTGATCCATGCATTTATTT	17	+	87434671-87434720	17qE4	Mus musculus cysteine-rich PDZ-binding protein (Cript), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA589469; 1200020A08Rik	AA589469; 1200020A08Rik
Mus musculus	RefSeq	ILMN_220788	ILMN_220788	PKD2	NM_008861.2	NM_008861.2		18764	31543486	NM_008861.2	Pkd2	NP_032887.2	ILMN_2866327	003060377	S	4563	CCTCTCCAACCTCTAACAGACTGCTGAGTAGACAGGCCTTTTCTGGGTCA	5	+	104934286-104934335	5qE5	Mus musculus polycystic kidney disease 2 (Pkd2), mRNA.	A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The series of events by which a mechanical stimulus is received by a cell and converted into a molecular signal [goid 50982] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	C030034P18Rik; TRPP2	C030034P18Rik; TRPP2
Mus musculus	RefSeq	ILMN_221339	ILMN_250264	LOC637082	XM_916287.2	XM_916287.2		637082	94370344	XM_916287.2	LOC637082	XP_921380.1	ILMN_1233896	000060626	S	1682	GGCACCCTGTATAGCTTCCTCTGTAAATGAAATTTAATGCTGTAACAGGT					PREDICTED: Mus musculus similar to TIFA, transcript variant 1 (LOC637082), mRNA.					
Mus musculus	RefSeq	ILMN_221091	ILMN_221091	EFCAB5	NM_176965.3	NM_176965.3		319634	118026914	NM_176965.3	Efcab5	NP_795939.2	ILMN_1232019	002680632	S	4362	TCTGCTCCCAGATACTCACCCCAGTACTCTCTAAAGCCAAAAGTGCTACC	11	-	76903659-76903708	11qB5	Mus musculus EF-hand calcium binding domain 5 (Efcab5), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RP23-100P23.5; 4930563A03Rik; MGC156377	RP23-100P23.5; 4930563A03Rik; MGC156377
Mus musculus	Riken	ILMN_205635	ILMN_205635	A430107N10RIK	ri|A430107N10|PX00064F09|AK040585|3306					AK040585	A430107N10Rik		ILMN_1215576	003190736	S	3123	GCTCTGTGTGCAACTGGGATTGCTGTCAACCTGATCACCTGACTTAGATC										
Mus musculus	RefSeq	ILMN_197421	ILMN_254563	LOC215539	XM_917820.1	XM_917820.1		215539	82885860	XM_917820.1	LOC215539	XP_922913.1	ILMN_1215706	000630661	S	4176	ACGAAAAAGGAGCACAAGGAAACTCCCAGCCTTGGCGGCCCTGGTCCAAG					PREDICTED: Mus musculus similar to catenin, alpha 2 (LOC215539), mRNA.					
Mus musculus	Riken	ILMN_203822	ILMN_203822	A230056E14RIK	ri|A230056E14|PX00128F11|AK038705|1597					AK038705	A230056E14Rik		ILMN_1255250	005290703	S	1252	CAGCCGGTGGGTGACAGTGGCTGGCTCCTTGATTAGAGGCCATACAGAGT										
Mus musculus	RefSeq	ILMN_211141	ILMN_211141	DDX39	NM_197982.2	NM_197982.2		68278	38372906	NM_197982.2	Ddx39	NP_932099.2	ILMN_1213524	002940685	S	1491	CTAGGTGACAAATCGATGTCTCTTTTTATTGTTCCAAAGCTTTAGTGATG	8	+	86247104-86247153	8qC2	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 (Ddx39), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	2610307C23Rik; BAT1; DDXL; URH49	2610307C23Rik; BAT1; DDXL; URH49
Mus musculus	RefSeq	ILMN_218975	ILMN_218975	OLFR463	NM_146413.1	NM_146413.1		258408	33239013	NM_146413.1	Olfr463	NP_666525.1	ILMN_2702643	006250309	S	381	CCGACCTCTCCACTATGTCACCATCATGAACAGCCAGCTTTGTATGGGGC	11	-	87706994-87707043	11qC	Mus musculus olfactory receptor 463 (Olfr463), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR240-1; MGC129182	MOR240-1; MGC129182
Mus musculus	RefSeq	ILMN_217256	ILMN_250949	AI132487	NM_001012310.1	NM_001012310.1		104910	60097913	NM_001012310.1	AI132487	NP_001012310.1	ILMN_2681001	005260441	S	1510	GTGCTGGCCACATGAAGATCCTGGAACCTGGGTCAGGGGTGGCTGTTAAT	12	+	110094955-110095004	12qF1	Mus musculus expressed sequence AI132487 (AI132487), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	HDMCP; AI876593; MGC107675	HDMCP; AI876593; MGC107675
Mus musculus	MEEBO	ILMN_217319	ILMN_217319	2410018I08RIK	scl0004106.1_50	NM_177561.2			31343518	NM_177561.2	2410018I08Rik		ILMN_1249108	003290372	S	3129	ACTTCACTGTGGGTTACAAAGGTTAAAAAAATGGCTACTGGTCTCTAATA										
Mus musculus	MEEBO	ILMN_185462	ILMN_185462	5330426P16RIK	scl0068190.1_26				51830838	XM_489578	5330426P16Rik		ILMN_1213756	006770288	S	1	GAGGGGTTGAACCTGAACACGTGAAAGAGAATCCAAGGTAATTGGGGAAG										
Mus musculus	RefSeq	ILMN_215609	ILMN_239570	PRAM1	NM_001002842.1	NM_001002842.1		378460	50726895	NM_001002842.1	Pram1	NP_001002842.1	ILMN_2661567	006940338	S	1722	CCAGCTACAGACCCCAAGCTGCTGAAACAGATCAGGAAGGCAGAAAAGGC	17	+	33781822-33781871	17qB1	Mus musculus PML-RAR alpha-regulated adaptor molecule 1 (Pram1), mRNA.		Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IMP]; Any process that modulates the frequency, rate, or extent of neutrophil degranulation [goid 43313] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	AY665714	AY665714
Mus musculus	RefSeq	ILMN_197606	ILMN_197606	LOC239090	XM_139067.2	XM_139067.2			28481205	XM_139067.2	LOC239090		ILMN_1236238	003460681	S	273	CCTGTTCATCGCCAGAGCTCAGCCTGGAGACGCAGGCATCTACTTCTGTG										
Mus musculus	Riken	ILMN_203846	ILMN_203846	A530097J15RIK	ri|A530097J15|PX00143D20|AK041295|2272					AK041295	A530097J15Rik		ILMN_1237414	004480270	S	1792	TCCAAGCGACCCATGCTATGATGAAATAAACGAAGATCGTGAGTTGACTG										
Mus musculus	RefSeq	ILMN_212312	ILMN_311420	LOC100047911	XM_001479110.1	XM_001479110.1		100047911	149263143	XM_001479110.1	LOC100047911	XP_001479160.1	ILMN_1232095	007510369	S	176	GACTTCACCTCTGCAGACATTCCCTGCAGGTATACTCCACAGTTGCCAAA					PREDICTED: Mus musculus hypothetical protein LOC100047911 (LOC100047911), mRNA.					
Mus musculus	Riken	ILMN_204835	ILMN_204835	ODF2	ri|A130020I08|PX00121D09|AK037468|1550					AK037468	Odf2		ILMN_1217305	006860707	S	1183	GCTGGGTGCACAGAGGTGGTTGTACTCGGAACAGAATTGCCAGGTCATCC						A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]		
Mus musculus	RefSeq	ILMN_220296	ILMN_220296	2210407C18RIK	NM_144544.1	NM_144544.1		78354	21362344	NM_144544.1	2210407C18Rik	NP_653127.1	ILMN_1226767	005340274	S	471	TAAAACCAATACGTGCTCCACGACAACTCCCCTAAAGTGCACAGGGGCAG	11	-	58424209-58424258	11qB1.3	Mus musculus RIKEN cDNA 2210407C18 gene (2210407C18Rik), mRNA.				Ep1; RP23-128D9.4	Ep1; RP23-128D9.4
Mus musculus	Riken	ILMN_201604	ILMN_201604	0610037B23RIK	ri|0610037B23|R000004B17|AK002767|743					AK002767	0610037B23Rik		ILMN_1248172	001980367	S	546	CTCTGGTCAACTCTGCTCGCTCAGTACCTGCTCACTCTGGCCCAAGGATT										
Mus musculus	RefSeq	ILMN_204160	ILMN_328823	LOC100046998	XM_001477204.1	XM_001477204.1		100046998	149267808	XM_001477204.1	LOC100046998	XP_001477254.1	ILMN_1258631	001500523	S	135	ACAACAGCAAATTCAAGAGCACGAAGAGGAAGCACGCAGAGCCGCTGGCC					PREDICTED: Mus musculus similar to optic atrophy 1 (autosomal dominant) (LOC100046998), mRNA.					
Mus musculus	Riken	ILMN_205809	ILMN_205809	ARNT	ri|A130047M16|PX00123H06|AK037762|4408					AK037762	Arnt		ILMN_1231986	004180725	S	4280	GGGGCTGGAGAGATGGCTTAGTGGTTAAGAGTTCAAATCCCAGCAACCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]		
Mus musculus	RefSeq	ILMN_219472	ILMN_230991	PLEC1	NM_201389.1	NM_201389.1		18810	41322930	NM_201389.1	Plec1	NP_958791.1	ILMN_1213678	006330270	S	227	TCTATGAGGTGCTCTTCCGTGAGGGGGTGATGGTTGCCAAGAAGGACCGG	15	-	76036475-76036524	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 6, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; AA591047; AU042537; PLTN; PCN	EBS1; AA591047; AU042537; PLTN; PCN
Mus musculus	RefSeq	ILMN_255616	ILMN_255616	ICMT	NM_133788.1	NM_133788.1		57295	51317396	NM_133788.1	Icmt	NP_598549.1	ILMN_2791410	006580364	S	4409	GAGCTGCTGCTTGGACCTAGGGTGTCTGTCGCCTTACCAATTCTTCCCAC	4	+	151680844-151680893	4qE2	Mus musculus isoprenylcysteine carboxyl methyltransferase (Icmt), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The methylation of the C-terminal amino acid of a protein [goid 6481] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that modulates the frequency, rate or extent of Ras protein signal transduction [goid 46578] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Catalysis of the reaction: S-adenosyl-L-methionine + protein C-terminal S-farnesyl-L-cysteine = S-adenosyl-L-homocysteine + protein C-terminal S-farnesyl-L-cysteine methyl ester [goid 4671] [evidence IMP]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA];  [goid 8140] [evidence IMP]	C80758; STE14; MGC118506; PPMT; 1700008E11Rik; HSTE14; pcCMT	C80758; STE14; MGC118506; PPMT; 1700008E11Rik; HSTE14; pcCMT
Mus musculus	RefSeq	ILMN_197881	ILMN_255616	ICMT	NM_133788.1	NM_133788.1		57295	51317396	NM_133788.1	Icmt	NP_598549.1	ILMN_1239023	001110259	S	686	CGGAACCCAGGTGATGCTGTGTAATCCCATCTGTGGCGTGGTCTATGCCC	4	+	151674854-151674863:151677131-151677170	4qE2	Mus musculus isoprenylcysteine carboxyl methyltransferase (Icmt), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The methylation of the C-terminal amino acid of a protein [goid 6481] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that modulates the frequency, rate or extent of Ras protein signal transduction [goid 46578] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Catalysis of the reaction: S-adenosyl-L-methionine + protein C-terminal S-farnesyl-L-cysteine = S-adenosyl-L-homocysteine + protein C-terminal S-farnesyl-L-cysteine methyl ester [goid 4671] [evidence IMP]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA];  [goid 8140] [evidence IMP]	C80758; STE14; MGC118506; PPMT; 1700008E11Rik; HSTE14; pcCMT	C80758; STE14; MGC118506; PPMT; 1700008E11Rik; HSTE14; pcCMT
Mus musculus	RefSeq	ILMN_185528	ILMN_260406	4631424J17RIK	XM_282969.7	XM_282969.7		70802	149261857	XM_282969.7	4631424J17Rik	XP_282969.4	ILMN_2427777	001300441	S	3611	GGTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGA	11	+	43520105-43520154	11qB1.1	PREDICTED: Mus musculus RIKEN cDNA 4631424J17 gene, transcript variant 1 (4631424J17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_241759	ILMN_241759	ZMYND12	NM_001014900.1	NM_001014900.1		332934	62460509	NM_001014900.1	Zmynd12	NP_001014900.1	ILMN_3108837	001570082	A	828	ATGACACCGGCTTGGATGAAGCCCAGGAAGCAGAAGCCATTCGGATCCTA	4	+	119120784-119120798:119122860-119122894	4qD2.1	Mus musculus zinc finger, MYND domain containing 12 (Zmynd12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI414736; RP23-132L14.1	AI414736; RP23-132L14.1
Mus musculus	RefSeq	ILMN_244437	ILMN_244437	6030429G01RIK	NM_001033548.1	NM_001033548.1		436022	85702050	NM_001033548.1	6030429G01Rik	NP_001028720.1	ILMN_2959253	001940195	S	2050	TCCTGACAAGGATCGAAGGCTGAAGGGACAACCCTGGGCTCCAGATCCTC	7	-	4126133-4126182	7qA1	Mus musculus RIKEN cDNA 6030429G01 gene (6030429G01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213921	ILMN_213921	TCEAL6	NM_025355.3	NM_025355.3		66104	142377046	NM_025355.3	Tceal6	NP_079631.2	ILMN_1236300	000070152	S	114	TACTGTGAGCCCAGAGAAGGTGCACAGGCCTGTCCTGGGTCTCCTCAGGT	X	-	131744496-131744496:131745064-131745112	XqF1	Mus musculus transcription elongation factor A (SII)-like 6 (Tceal6), mRNA.			Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	MGC107171; RP23-460B8.1; 1500026B10Rik	MGC107171; RP23-460B8.1; 1500026B10Rik
Mus musculus	RefSeq	ILMN_257433	ILMN_257433	OLFR194	NM_001005524.1	NM_001005524.1		433031	53850585	NM_001005524.1	Olfr194	NP_001005524.1	ILMN_3161142	005220343	S	647	CCTATGCCCACGTCCTCTTTTCCATCCTGAAAACAAAGTCTGAGAGGGGC	16	-	59119198-59119247	16qC1.3	Mus musculus olfactory receptor 194 (Olfr194), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR182-13; MOR182-7P	MOR182-13; MOR182-7P
Mus musculus	Riken	ILMN_203130	ILMN_203130	6430519P13RIK	ri|6430519P13|PX00045N23|AK032323|2792					AK032323	6430519P13Rik		ILMN_1242934	000060465	S	2502	CCAGAATGTGTGTGCACAGAAGCCAACAGAGGGCGTGAATCACATGGGGC										
Mus musculus	RefSeq	ILMN_218249	ILMN_218249	EPS15L1	NM_007944.2	NM_007944.2		13859	142349898	NM_007944.2	Eps15l1	NP_031970.1	ILMN_1225674	006330504	S	2924	TGCCAGTCTCTGAGGTATGATGGTGATCAGTTAGGCTCTTCCTTCCAATC	8	-	74865053-74865102	8qB3.3	Mus musculus epidermal growth factor receptor pathway substrate 15-like 1 (Eps15l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Eps15R; Eps15-rs; AI593686; 9830147J04Rik	Eps15R; Eps15-rs; AI593686; 9830147J04Rik
Mus musculus	Riken	ILMN_207369	ILMN_207369	C130058G02RIK	ri|C130058G02|PX00666O20|AK081640|1320					AK081640	C130058G02Rik		ILMN_2587091	000650661	S	846	GACAGGCAGATCACTGAGTTCCAAGCCAGGCAGAGCTACAGAATGAGACC										
Mus musculus	MEEBO	ILMN_217960	ILMN_217960	4732415M23RIK	scl0320869.2_188	NM_177279.2			31343235	NM_177279.2	4732415M23Rik		ILMN_2689818	002650561	S	3882	GCTGCTCCCTGAACATAGATGGGCACGTGCCCCACACTCACGGGAACAAT										
Mus musculus	RefSeq	ILMN_192409	ILMN_241466	CUL3	NM_016716.4	NM_016716.4		26554	146134444	NM_016716.4	Cul3	NP_057925.1	ILMN_1224546	000510440	S	2530	GCAGTACGTGTTATAGACCACTCAGATCAAGCCTCTACTCCCTCTGAGAG				1qC4	Mus musculus cullin 3 (Cul3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyclins, proteins whose levels in a cell varies markedly during the cell cycle, and which play key roles in regulating cell cycle phase transitions [goid 8054] [evidence ISS]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]; The morphogenesis of trophectoderm cells [goid 1831] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with cyclins, proteins whose levels in a cell varies markedly during the cell cycle, rising steadily until mitosis, then falling abruptly to zero. As cyclins reach a threshold level, they are thought to drive cells into G2 phase and thus to mitosis [goid 30332] [evidence IPI]	AI467304; AW146203; mKIAA0617	AI467304; AW146203; mKIAA0617
Mus musculus	Riken	ILMN_201957	ILMN_201957	MYO5A	ri|0610009A05|R000002E23|AK002362|2641					AK002362	Myo5a		ILMN_1256749	001090707	S	797	CACCCGGCTGACCAATGAAAACCTGGATCTGATGGAACAACTTGAAAAGC						Any complex of actin, myosin, and accessory proteins [goid 42641] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 6582] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IDA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; Movement of a vesicle along an actin filament, mediated by motor proteins [goid 30050] [evidence TAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence IDA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process by which endoplasmic reticulum is transported to, and/or maintained in, a specific location within the cell [goid 51643] [evidence IMP]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IMP]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IDA]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement [goid 31987] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence ISA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of the IP3 receptor [goid 31585] [evidence IMP]; Any process by which a secretory granule is transported to, and/or maintained in, a specific location within the cell [goid 32252] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the plus end of a microtubule [goid 51010] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211970	ILMN_211970	MTERFD1	NM_025547.2	NM_025547.2		66410	142381719	NM_025547.2	Mterfd1	NP_079823.1	ILMN_2730991	003310484	S	1310	ATCTTTTCCTGATAAAATATTTTGTAAAGAGATTGCCAAAGCTTCACTAA	13	-	67013152-67013201	13qB3	Mus musculus MTERF domain containing 1 (Mterfd1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			2410017I18Rik	2410017I18Rik
Mus musculus	RefSeq	ILMN_211970	ILMN_211970	MTERFD1	NM_025547.2	NM_025547.2		66410	142381719	NM_025547.2	Mterfd1	NP_079823.1	ILMN_2621304	005340373	S	1146	GTACACAATGTGATGAATATTCCCCACCACATCATCGTCAAGTTTCCACA	13	-	67015564-67015613	13qB3	Mus musculus MTERF domain containing 1 (Mterfd1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			2410017I18Rik	2410017I18Rik
Mus musculus	RefSeq	ILMN_191622	ILMN_229165	4930511M06RIK	XM_923491.2	XM_923491.2		75084	94404903	XM_923491.2	4930511M06Rik	XP_928584.1	ILMN_2480705	003710192	S	690	CTGTTATCCTTAAACTGTCTGCCTCGGGGCTCCCCAACTCTCACAACCTC				18qD3	PREDICTED: Mus musculus RIKEN cDNA 4930511M06 gene (4930511M06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197560	ILMN_197560	LOC329664	XM_287254.1	XM_287254.1			28491754	XM_287254.1	LOC329664		ILMN_1257845	005900228	S	206	TAGAATGGACGGGAGATGTGGCTCAGCGGAAGAGCTGGGAAGAGCACAGG										
Mus musculus	Riken	ILMN_205411	ILMN_205411	E130010O04RIK	ri|E130010O04|PX00208E11|AK053342|3426					AK053342	E130010O04Rik		ILMN_1226672	006940671	S	3145	GTTGCAGGAGGCAGTGCTGTGTTTTGACTTGTTTCCTTGGTGGGAGCTGC										
Mus musculus	RefSeq	ILMN_200020	ILMN_200020	LOC383110	XM_356881.1	XM_356881.1			38079871	XM_356881.1	LOC383110		ILMN_1213834	005890333	S	361	TCTGGATGGGTTGAGGCTTTCCCCACCAAGCAGGAAACAGCTACCATGGC										
Mus musculus	Riken	ILMN_206385	ILMN_206385	C030013F01RIK	ri|C030013F01|PX00074A14|AK081226|1333					AK081226	C030013F01Rik		ILMN_1216235	003290162	S	1210	CCAGTGGTGCATACCTCTAATGTCAACGCTCAGGAGACAGAAGCAGGAGG										
Mus musculus	RefSeq	ILMN_211548	ILMN_211548	RAPSN	NM_009023.2	NM_009023.2		19400	142348284	NM_009023.2	Rapsn	NP_033049.1	ILMN_1235236	004880056	S	972	GCTATGAGCATCATGACTGAGATCGGAAACCGCCTCGGGCAGGTGCACGT	2	+	90883321-90883370	2qE1	Mus musculus receptor-associated protein of the synapse (Rapsn), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an acetylcholine receptor [goid 33130] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC130501; Raps; Nraps; 43kDa; rapsyn	MGC130501; Raps; Nraps; 43kDa; rapsyn
Mus musculus	RefSeq	ILMN_211548	ILMN_211548	RAPSN	NM_009023.2	NM_009023.2		19400	142348284	NM_009023.2	Rapsn	NP_033049.1	ILMN_2723095	003370482	S	1387	GCTTTGTGTGACTTCAGCGGCCATCTTGGGTTTCCACACAACCTCCCCTG	2	+	90885665-90885675:90885676-90885714	2qE1	Mus musculus receptor-associated protein of the synapse (Rapsn), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an acetylcholine receptor [goid 33130] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC130501; Raps; Nraps; 43kDa; rapsyn	MGC130501; Raps; Nraps; 43kDa; rapsyn
Mus musculus	MEEBO	ILMN_213339	ILMN_213339	PDCD5	scl0056330.1_0	NM_019746.2			31340576	NM_019746.2	Pdcd5		ILMN_2636116	003940392	S	8	AAGGCGCCGGGCTCGAGTCTCCGGCCGAAGCGATTCCAACCGAGTGTACC							A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187541	ILMN_187541	V1RE7	NM_134196.1	NM_134196.1		171230	21717714	NM_134196.1	V1re7	NP_598957.1	ILMN_1255339	000270452	S	854	CTTTGGGACCCTTTATTGTGACCCAAGACACTGCTTTGCCCAGATTCAGC	17	-	21026712-21026761	17qA3.2	Mus musculus vomeronasal 1 receptor, E7 (V1re7), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	V1re5	V1re5
Mus musculus	RefSeq	ILMN_227830	ILMN_227830	OTTMUSG00000000514	NM_001013787.1	NM_001013787.1		432736	62000661	NM_001013787.1	OTTMUSG00000000514	NP_001013809.1	ILMN_2996916	001400438	S	530	GGATATTTCTCACTCTCATGGTCCTGAGAGATGCAGTGTTTCAGGGTGCT	13	-	22897808-22897857	13qA3.1	Mus musculus predicted gene, OTTMUSG00000000514 (OTTMUSG00000000514), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_228763	ILMN_228763	GM784	NM_001007580.1	NM_001007580.1		333564	56090555	NM_001007580.1	Gm784	NP_001007581.1	ILMN_3027262	004220167	I	1445	CCCAAAGTGCTAGCAACCCTTCTGTCTCTGAAAATGCTCATAACCCCTCC	X	-	103640982-103641031	XqD	Mus musculus gene model 784, (NCBI) (Gm784), mRNA.				MGC100196; Fndc3c; MGC100347	MGC100196; Fndc3c; MGC100347
Mus musculus	RefSeq	ILMN_228763	ILMN_228763	GM784	NM_001007580.1	NM_001007580.1		333564	56090555	NM_001007580.1	Gm784	NP_001007581.1	ILMN_3100227	003450612	A	4226	CAGGGCATGGCAAAGGCAGTGGGAGTAAAGGAAAAGGCAACCATAATGAC	X	-	103615918-103615967	XqD	Mus musculus gene model 784, (NCBI) (Gm784), mRNA.				MGC100196; Fndc3c; MGC100347	MGC100196; Fndc3c; MGC100347
Mus musculus	MEEBO	ILMN_191646	ILMN_191646	ATF2	scl19129.15_66				33468882	NM_009715	Atf2		ILMN_2751054	003400360	S	1752	CTCCCAGGCACAGCCCTCAGGAAGTTGATTAAAACCTGCAGTGCAACAGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_191646	ILMN_191646	ATF2	scl19129.15_66				33468882	NM_009715	Atf2		ILMN_2751055	004010373	S	1754	CCCAGGCACAGCCCTCAGGAAGTTGATTAAAACCTGCAGTGCAACAGTTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_223834	ILMN_223834	HDC	scl18719.12.1_11				31982163	NM_008230	Hdc		ILMN_1256122	003890086	S	1808	GTTACTTGTCCGTCCAGAACAGGAGGAAGACAACGCGGTCCCTCAGCTGC							The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 42423] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids, as carried out by individual cells [goid 6519] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence TAS]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-histidine = histamine + CO2 [goid 4398] [evidence IMP]; Catalysis of the reaction: L-histidine = histamine + CO2 [goid 4398] [evidence TAS]		
Mus musculus	RefSeq	ILMN_220041	ILMN_220041	MRGPRB5	NM_207538.1	NM_207538.1		404239	46430531	NM_207538.1	Mrgprb5	NP_997421.1	ILMN_1235014	000830440	S	693	GGGTCTGCCCTTTGGGATTTACTCATCTTTCTTGATAATGTTTAAGGAGT	7	-	55423613-55423662	7qB4	Mus musculus MAS-related GPR, member B5 (Mrgprb5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgB5	MrgB5
Mus musculus	RefSeq	ILMN_195053	ILMN_332080	LOC100047936	XR_033905.1	XR_033905.1		100047936	149259582	XR_033905.1	LOC100047936		ILMN_2512149	004560292	S	10243	CTCGATGAAGACTCTTGTTGAGACTTACTAAACACTTTAGGCGCAGTCGG					PREDICTED: Mus musculus similar to sortilin-related receptor, LDLR class A repeats-containing (LOC100047936), misc RNA.					
Mus musculus	Riken	ILMN_205354	ILMN_205354	KNSL1	ri|D030019B03|PX00179H08|AK050778|3127					AK050778	Knsl1		ILMN_1251822	004230242	S	2851	GCTGCGCACTAACATGTATCAAACAAACAGAAACCCAGCGACTCAGGTGG										
Mus musculus	RefSeq	ILMN_207502	ILMN_207502	4833409J19RIK	XM_148097.1	XM_148097.1			20892582	XM_148097.1	4833409J19Rik		ILMN_1260590	000830338	I	1439	GTGCAGCAGAAGGCAGTCATGCCAACAGGGGTGAGGAAGGTCAGTTGTTG										
Mus musculus	RefSeq	ILMN_216166	ILMN_216166	BXDC2	NM_026396.2	NM_026396.2		67832	31980984	NM_026396.2	Bxdc2	NP_080672.2	ILMN_2668001	005960152	S	580	CAGTACGCCACGATACCATCCCAAGAGTCAGCCGTTTGTGGACCACGTGT	15	-	10423441-10423490	15qA1	Mus musculus brix domain containing 2 (Bxdc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		C76935; 1110064N10Rik	C76935; 1110064N10Rik
Mus musculus	RefSeq	ILMN_216166	ILMN_216166	BXDC2	NM_026396.2	NM_026396.2		67832	31980984	NM_026396.2	Bxdc2	NP_080672.2	ILMN_2853744	002100719	S	791	CCAGTCTCCAAACATGCATCGGCGTGTCATAAGATCCATCACAGCTGCCA	15	-	10421287-10421321:10421532-10421546	15qA1	Mus musculus brix domain containing 2 (Bxdc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		C76935; 1110064N10Rik	C76935; 1110064N10Rik
Mus musculus	RefSeq	ILMN_209667	ILMN_224365	SMARCA2	NM_011416.2	NM_011416.2		67155	51593083	NM_011416.2	Smarca2	NP_035546.2	ILMN_2598033	000380273	S	1260	CGCACCAAAGCAACCGTGGAACTGAAAGCACTTCGCTTACTCAACTTCCA	19	+	26721581-26721630	19qC1	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (Smarca2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence TAS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence TAS]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SNF2alpha; brahma; Snf2l2; brm; 2610209L14Rik	SNF2alpha; brahma; Snf2l2; brm; 2610209L14Rik
Mus musculus	RefSeq	ILMN_224365	ILMN_224365	SMARCA2	NM_011416.2	NM_011416.2		67155	51593083	NM_011416.2	Smarca2	NP_035546.2	ILMN_3075712	001580327	I	3835	ATGAGGTACCAGACGACGAGACCCTGAACCAGATGATTGCTCGCCGGGAG	19	+	26790612-26790661	19qC1	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (Smarca2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence TAS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence TAS]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SNF2alpha; brahma; Snf2l2; brm; 2610209L14Rik	SNF2alpha; brahma; Snf2l2; brm; 2610209L14Rik
Mus musculus	RefSeq	ILMN_224365	ILMN_224365	SMARCA2	NM_011416.2	NM_011416.2		67155	51593083	NM_011416.2	Smarca2	NP_035546.2	ILMN_3154810	003420154	A	5606	CTAGAATACCCTGGATGGCTTCTCTTGTCCACCCGATCTCCCGTGTTACC	19	+	26852604-26852653	19qC1	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (Smarca2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence TAS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence TAS]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SNF2alpha; brahma; Snf2l2; brm; 2610209L14Rik	SNF2alpha; brahma; Snf2l2; brm; 2610209L14Rik
Mus musculus	RefSeq	ILMN_229804	ILMN_229804	OLFR366	NM_001005569.1	NM_001005569.1		236509	53933205	NM_001005569.1	Olfr366	NP_001005569.1	ILMN_2800264	001660019	S	768	ATCAGTGTACATTCGCCCCTCATCCACCTACTCAGTGACAAAGGACCGAG	2	+	37075778-37075827	2qB	Mus musculus olfactory receptor 366 (Olfr366), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR138-5P; MOR138-6	MOR138-5P; MOR138-6
Mus musculus	RefSeq	ILMN_221150	ILMN_221150	2610019A05RIK	NM_028126.2	NM_028126.2		72149	142387616	NM_028126.2	2610019A05Rik	NP_082402.1	ILMN_2731592	007150360	S	1425	CAAGCTGGCTGTTGGCTACTTGAAAGGACATTCTAGAAGGGACTTCACTG	11	-	106025190-106025239	11qE1	Mus musculus RIKEN cDNA 2610019A05 gene (2610019A05Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI480680; 6030402H20Rik; E130112C09Rik	AI480680; 6030402H20Rik; E130112C09Rik
Mus musculus	Riken	ILMN_202180	ILMN_202180	1700047G07RIK	ri|1700047G07|ZX00074L20|AK006709|452					AK006709	1700047G07Rik		ILMN_1239313	005220086	S	1	GAGGGTTAATTGTTGCGCGCGCTCACGACCGGCCAGGAAGAACGACGCTG										
Mus musculus	RefSeq	ILMN_216303	ILMN_320787	LOC100048511	XM_001480588.1	XM_001480588.1		100048511	149268033	XM_001480588.1	LOC100048511	XP_001480638.1	ILMN_1227288	007380687	S	198	GCAGAACCCTGCGTGCCGGTTATAGAATTTTCATGTTGACATTGTAGGAG					PREDICTED: Mus musculus hypothetical protein LOC100048511 (LOC100048511), mRNA.					
Mus musculus	RefSeq	ILMN_213720	ILMN_213720	ATP6V1G2	NM_023179.3	NM_023179.3		66237	115292439	NM_023179.3	Atp6v1g2	NP_075668.1	ILMN_1228796	005290382	S	1396	TCTATGACATTCACATGCATGCATTCCTTTGTGTGCCCTCAGCACCTTGC	17	+	35375364-35375413	17qB1	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit G2 (Atp6v1g2), mRNA.	Penetrating at least one phospholipid bilayer of a synaptic vesicle membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30285] [evidence IDA]; A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [evidence IPI]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]	NG38; 1500002D01Rik; Atp6g2; VAG2	NG38; 1500002D01Rik; Atp6g2; VAG2
Mus musculus	RefSeq	ILMN_213720	ILMN_213720	ATP6V1G2	NM_023179.3	NM_023179.3		66237	115292439	NM_023179.3	Atp6v1g2	NP_075668.1	ILMN_2640082	005910563	S	135	CGCCTTCGGAACAGCATCCTCTCTAGTGATAAAAATGGCCAGTCAGACCC	17	+	35373675-35373708:35373709-35373724	17qB1	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit G2 (Atp6v1g2), mRNA.	Penetrating at least one phospholipid bilayer of a synaptic vesicle membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30285] [evidence IDA]; A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [evidence IPI]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]	NG38; 1500002D01Rik; Atp6g2; VAG2	NG38; 1500002D01Rik; Atp6g2; VAG2
Mus musculus	MEEBO	ILMN_188023	ILMN_188023	4833409A17RIK	scl074580.1_22				51771587	XM_193941	4833409A17Rik		ILMN_1217878	003460341	S	3	GTCCTACATCCTGCCAAACAGTCCCATGTCTCAGAGCTTCTTCACCCCTC							The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail [goid 16117] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217735	ILMN_217735	SDSL	NM_133902.2	NM_133902.2		257635	20589948	NM_133902.2	Sdsl	NP_598663.2	ILMN_1231627	005550736	S	978	GGTCATCGTGTGCGGTGGCAACAACATTAGTAGCCAACAGCTTCAGGAGC	5	-	120908392-120908441	5qF	Mus musculus serine dehydratase-like (Sdsl), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	SDH1; AI504310; 4432411H13Rik; SDS-RS1	SDH1; AI504310; 4432411H13Rik; SDS-RS1
Mus musculus	RefSeq	ILMN_213045	ILMN_213045	BC031748	NM_146261.1	NM_146261.1		245622	22122858	NM_146261.1	BC031748	NP_666373.1	ILMN_2632964	001030220	S	3006	TACCTTGCAGCATTGCTGAGGCCTGTGGTTGGGCTTTAACTTTCGAATGC	X	+	133611784-133611833	XqF1	Mus musculus cDNA sequence BC031748 (BC031748), mRNA.				MGC19245; RP23-272P2.1	MGC19245; RP23-272P2.1
Mus musculus	RefSeq	ILMN_196856	ILMN_213045	BC031748	NM_146261.1	NM_146261.1		245622	22122858	NM_146261.1	BC031748	NP_666373.1	ILMN_2526041	000510682	S	486	GTAGTGAGGAGCTGTTCTCATCCGTTTCTGTTGGAGATCAAGATGACTGC	X	+	133597241-133597290	XqF1	Mus musculus cDNA sequence BC031748 (BC031748), mRNA.				MGC19245; RP23-272P2.1	MGC19245; RP23-272P2.1
Mus musculus	Riken	ILMN_206413	ILMN_206413	XPR1	ri|C230026M01|PX00173L22|AK082228|2735					AK082228	Xpr1		ILMN_1228878	001240131	S	2361	CAGTGGGCCAGGAGCCACAAGATGGAGGCCAAAATGAGGGCCAAGTGTAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211303	ILMN_314077	LOC100044218	XM_001471913.1	XM_001471913.1		100044218	149252892	XM_001471913.1	LOC100044218	XP_001471963.1	ILMN_1245604	003290735	S	2068	CACCCTCCTCATCCCCTCTCTTCTAATGTCCTTACCTTTTACAGATGCTT					PREDICTED: Mus musculus hypothetical protein LOC100044218 (LOC100044218), mRNA.					
Mus musculus	RefSeq	ILMN_211303	ILMN_314077	LOC100044218	XM_001471913.1	XM_001471913.1		100044218	149252892	XM_001471913.1	LOC100044218	XP_001471963.1	ILMN_1227348	005870333	S	2363	CCTCACACGAGTTTCTCCATCTTCCCTCCTTTCTGCAATAAAGTTCCCAG					PREDICTED: Mus musculus hypothetical protein LOC100044218 (LOC100044218), mRNA.					
Mus musculus	RefSeq	ILMN_217895	ILMN_217895	6720457D02RIK	NM_175252.3	NM_175252.3		77117	142354343	NM_175252.3	6720457D02Rik	NP_780461.1	ILMN_2689003	004810390	S	1778	TAAGGAATGTGGAAAAATCTATGCCAGGCAGTTATCTCCTAATGCAGCCT	13	-	62618432-62618481	13qB3	Mus musculus RIKEN cDNA 6720457D02 gene (6720457D02Rik), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210151	ILMN_210151	RNF133	NM_198251.1	NM_198251.1		386611	38016195	NM_198251.1	Rnf133	NP_937894.1	ILMN_2982288	005810091	S	1207	GGCAGCCAGCCTCCCGAAGCAGAGGAAACCAGTCATCCTTCACATGGACA	6	-	23598922-23598971	6qA3.1	Mus musculus ring finger protein 133 (Rnf133), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Greul2	Greul2
Mus musculus	RefSeq	ILMN_222688	ILMN_235230	KBTBD11	XM_486083.4	XM_486083.4		74901	94383046	XM_486083.4	Kbtbd11	XP_486083.2	ILMN_1249105	007560091	S	4914	CCGGGGCGTACTCTTTCCATTTGTACTCAACCTGCCTGAGAAGCCGGACC	8	+	15029232-15029281	8qA1.1	PREDICTED: Mus musculus kelch repeat and BTB (POZ) domain containing 11, transcript variant 1 (Kbtbd11), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_204921	ILMN_204921	C230066C21RIK	ri|C230066C21|PX00175D01|AK048784|2229					AK048784	C230066C21Rik		ILMN_1239292	005490373	S	1161	GGGATCCAAGGCCACTTCCAGCCCCACAGCAAGTTAGAAGTCAATCTGGG										
Mus musculus	RefSeq	ILMN_210042	ILMN_250637	GNL3	NM_178846.2	NM_178846.2		30877	142363446	NM_178846.2	Gnl3	NP_849174.1	ILMN_2601639	004810255	S	1489	CATCTGACGGGTCGTCTGCCTTGGATAGAGCGAGTCAAGAGGATGAAACC	14	-	31825764-31825813	14qB	Mus musculus guanine nucleotide binding protein-like 3 (nucleolar) (Gnl3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC46970; C77032; Ns; BC037996	MGC46970; C77032; Ns; BC037996
Mus musculus	RefSeq	ILMN_224577	ILMN_224577	OLFR317	NM_001011769.1	NM_001011769.1		257931	58801315	NM_001011769.1	Olfr317	NP_001011769.1	ILMN_2869015	001400491	S	689	CAGCTGCAGGACGGCAGAAAGCATTTAATACGTGTGGCTCGCACCTCACC	11	-	58545927-58545976	11qB1.3	Mus musculus olfactory receptor 317 (Olfr317), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-47	MOR256-47
Mus musculus	RefSeq	ILMN_198833	ILMN_198833	LOC233711	XM_146032.2	XM_146032.2			38088664	XM_146032.2	LOC233711		ILMN_1230227	004810544	S	2082	TGTCCAGCACTGCCTAGACATTTGCAGGCATGCCACAGAGATCTGTGAGC										
Mus musculus	RefSeq	ILMN_200345	ILMN_200345	LOC385664	XM_358880.1	XM_358880.1			38081380	XM_358880.1	LOC385664		ILMN_1216704	004210673	S	1525	ACTTGATGCTGTGTGTTTGTATCCGCAAAGAGCGTGTAGCAAGGTTTTGC										
Mus musculus	RefSeq	ILMN_191868	ILMN_240120	KTELC1	NM_172380.3	NM_172380.3		224143	146149137	NM_172380.3	Ktelc1	NP_759012.1	ILMN_2665889	003520064	S	2445	GAGATACACTGTGAGAAATGGGTCAGTTCAGATCCTTACTTGCCCTGGAG				16qB4	Mus musculus KTEL (Lys-Tyr-Glu-Leu) containing 1 (Ktelc1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			9630046K23Rik	9630046K23Rik
Mus musculus	MEEBO	ILMN_213445	ILMN_213445	SLC9A9	scl0331004.16_110	NM_177909.2			31342692	NM_177909.2	Slc9a9		ILMN_2637113	004730437	S	2199	TGGACAGAATCAAACCTTATCACATGTATCCTCCCGTGCCTTCAGAAATG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]		
Mus musculus	RefSeq	ILMN_260179	ILMN_260179	MRPS10	NM_183086.1	NM_183086.1		64657	34147048	NM_183086.1	Mrps10	NP_898909.1	ILMN_2841840	001740626	S	825	AGCCAGGTGGGAGCAGGCTGGGTTTCAGGGAAGCACCACTGTATGTTCTC	17	+	47515340-47515389	17qC	Mus musculus mitochondrial ribosomal protein S10 (Mrps10), nuclear gene encoding mitochondrial protein, mRNA.	The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	AW743084; Rpms10; 1110038B19Rik	AW743084; Rpms10; 1110038B19Rik
Mus musculus	RefSeq	ILMN_184842	ILMN_260179	MRPS10	NM_183086.1	NM_183086.1		64657	34147048	NM_183086.1	Mrps10	NP_898909.1	ILMN_2600672	007560465	S	5	GAGGGCCATGGAAACCGTGAGCTCAGAGAAGACAACGCTGGTCTCGGATT	17	+	47506150-47506199	17qC	Mus musculus mitochondrial ribosomal protein S10 (Mrps10), nuclear gene encoding mitochondrial protein, mRNA.	The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	AW743084; Rpms10; 1110038B19Rik	AW743084; Rpms10; 1110038B19Rik
Mus musculus	RefSeq	ILMN_184842	ILMN_260179	MRPS10	NM_183086.1	NM_183086.1		64657	34147048	NM_183086.1	Mrps10	NP_898909.1	ILMN_2691360	000840255	S	559	CTGGAAGCACAGCCAGTGTCTACCTGGAGTATATCCAGCGAAACTTGCCT	17	+	47514722-47514771	17qC	Mus musculus mitochondrial ribosomal protein S10 (Mrps10), nuclear gene encoding mitochondrial protein, mRNA.	The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	AW743084; Rpms10; 1110038B19Rik	AW743084; Rpms10; 1110038B19Rik
Mus musculus	MEEBO	ILMN_210507	ILMN_210507	D430014P18RIK	scl51820.12.1_5	XM_283501.2			38084047	XM_283501.2	D430014P18Rik		ILMN_2606304	001980551	S	1633	GAGCTCTCACAGAATGTCGTCTACAAAAGTGAGGACGGAAGATGGGTCAC										
Mus musculus	RefSeq	ILMN_215515	ILMN_215515	A130042E20RIK	NM_172550.4	NM_172550.4		216119	113865957	NM_172550.4	A130042E20Rik	NP_766138.3	ILMN_1220132	006760477	S	3803	CAACCATCCAACCCTCCCGGAGTGAACAGTGCTTTGTAAACAGCGTGTGT	10	-	75923681-75923730	10qC1	Mus musculus RIKEN cDNA A130042E20 gene (A130042E20Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	ORF57; C21orf57; ORF66	ORF57; C21orf57; ORF66
Mus musculus	RefSeq	ILMN_200087	ILMN_200087	LOC385755	XM_358931.1	XM_358931.1			38080294	XM_358931.1	LOC385755		ILMN_1257127	001300382	S	677	CATGGAAGAGGCCGGTGGCATATTTGTCTAAGAAGCTGGACTCAGTGGCC										
Mus musculus	RefSeq	ILMN_196529	ILMN_196529	2410004N05RIK	XM_134461.3	XM_134461.3			38089484	XM_134461.3	2410004N05Rik		ILMN_2524664	001770608	S	1832	AGGGAGGACCCTGGTAGCCCCAGATGGATCATATCACCTCAGAGCACAGC										
Mus musculus	RefSeq	ILMN_209578	ILMN_322951	LOC100048841	XM_001479117.1	XM_001479117.1		100048841	149234103	XM_001479117.1	LOC100048841	XP_001479167.1	ILMN_1221516	007570066	S	1177	CTTTATCGAACTCATGCATTAGAACCAACATGCTCTCTTCCAATTCCTAG	1	+	61351786-61351835		PREDICTED: Mus musculus similar to activation-inducible lymphocyte immunomediatory molecule AILIM (LOC100048841), mRNA.					
Mus musculus	MEEBO	ILMN_187084	ILMN_187084	RGS17	scl38240.6_287				9910531	NM_019958	Rgs17		ILMN_1219289	001190139	S	573	CACCGAAAGAGGTCAGCCTGGATTCTCGAGTTAGAGAGGTGATCAACAGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	Riken	ILMN_204740	ILMN_204740	B930037B01RIK	ri|B930037B01|PX00164A14|AK047221|4111					AK047221	B930037B01Rik		ILMN_2567267	000940097	S	3882	CTACATAGCTAGTCCCAGGCAAGCCAGGGCTATATGGTAAGGTCCTGCCT										
Mus musculus	RefSeq	ILMN_212906	ILMN_234140	BC017612	NM_133214.2	NM_133214.2		170748	113865950	NM_133214.2	BC017612	NP_573477.2	ILMN_2631514	007380048	S	479	GCCGTCACCGAGTGAGCACGTCCATTCTGCTTTCCTCTGCAGAGATGTCC	9	+	15349229-15349243:15349244-15349278	9qA2	Mus musculus cDNA sequence BC017612 (BC017612), mRNA.				Fn5	Fn5
Mus musculus	RefSeq	ILMN_211893	ILMN_323254	D030022P06RIK	XM_001479864.1	XM_001479864.1		546001	149258110	XM_001479864.1	D030022P06Rik	XP_001479914.1	ILMN_2620501	002750220	S	1038	GCTCAACTAGGCTATTCAAAGCACCTGAGACTTCAAGGGGAGGTCAGCCT				7qF3	PREDICTED: Mus musculus RIKEN cDNA D030022P06 gene (D030022P06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210282	ILMN_210282	NSUN5	NM_145414.2	NM_145414.2		100609	154146244	NM_145414.2	Nsun5	NP_663389.2	ILMN_1245761	004920730	S	125	AACCTGAAGCAGTTGTACGCTCTGGTGTGCGAGACGCAGCGCTACTCGGC				5qG2	Mus musculus NOL1/NOP2/Sun domain family, member 5 (Nsun5), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Wbscr20; AI326939; Nol1r; 9830109N13Rik; Wbscr20a	Wbscr20; AI326939; Nol1r; 9830109N13Rik; Wbscr20a
Mus musculus	RefSeq	ILMN_210282	ILMN_210282	NSUN5	NM_145414.2	NM_145414.2		100609	154146244	NM_145414.2	Nsun5	NP_663389.2	ILMN_1221895	000160068	S	353	CGACTCAAGGTTCATCGGGGTGTGAGCCGAAATGAGGACCTGTTGCAAGA				5qG2	Mus musculus NOL1/NOP2/Sun domain family, member 5 (Nsun5), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Wbscr20; AI326939; Nol1r; 9830109N13Rik; Wbscr20a	Wbscr20; AI326939; Nol1r; 9830109N13Rik; Wbscr20a
Mus musculus	RefSeq	ILMN_210282	ILMN_210282	NSUN5	NM_145414.2	NM_145414.2		100609	154146244	NM_145414.2	Nsun5	NP_663389.2	ILMN_1219921	004180224	S	1211	GGTCTGAGTACCTTTCCAGGGTCTGAACACTGCCTCCGGGCTTCCCCTGA				5qG2	Mus musculus NOL1/NOP2/Sun domain family, member 5 (Nsun5), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Wbscr20; AI326939; Nol1r; 9830109N13Rik; Wbscr20a	Wbscr20; AI326939; Nol1r; 9830109N13Rik; Wbscr20a
Mus musculus	MEEBO	ILMN_191140	ILMN_191140	2610010A15RIK	scl078389.1_53						2610010A15Rik		ILMN_2476466	004850427	S	19	ACCGGGGCATCTCTCTGAGCCCGTGAGCTGTTCCTCAGTACAACTCTAGA										
Mus musculus	RefSeq	ILMN_220004	ILMN_220004	AP1G2	NM_007455.2	NM_007455.2		11766	141801694	NM_007455.2	Ap1g2	NP_031481.1	ILMN_1246903	001690544	S	2055	GCGTGAGGGCCTACAGCTGGATCTTTCTTTCATGCGGCCCTTGGAGACCC	14	-	55718628-55718677	14qC3	Mus musculus adaptor protein complex AP-1, gamma 2 subunit (Ap1g2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Adtg2; G2ad; MGC118107	Adtg2; G2ad; MGC118107
Mus musculus	RefSeq	ILMN_220004	ILMN_220004	AP1G2	NM_007455.2	NM_007455.2		11766	141801694	NM_007455.2	Ap1g2	NP_031481.1	ILMN_2716336	004260497	S	595	GGCACAGTCACGCTGATCACGGAGCTCTGTGAAAGAAACCCTGCAGCCCT	14	-	55723438-55723487	14qC3	Mus musculus adaptor protein complex AP-1, gamma 2 subunit (Ap1g2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Adtg2; G2ad; MGC118107	Adtg2; G2ad; MGC118107
Mus musculus	RefSeq	ILMN_217428	ILMN_220004	AP1G2	NM_007455.2	NM_007455.2		11766	141801694	NM_007455.2	Ap1g2	NP_031481.1	ILMN_2683095	004560379	S	2583	TTAAAGGAACACCGGGTGACTGCCCTGGGCTCTTAAGACTGTGGTCATCA				14qC3	Mus musculus adaptor protein complex AP-1, gamma 2 subunit (Ap1g2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Adtg2; G2ad; MGC118107	Adtg2; G2ad; MGC118107
Mus musculus	RefSeq	ILMN_221508	ILMN_259992	1700027A23RIK	NM_029604.2	NM_029604.2		76420	142384234	NM_029604.2	1700027A23Rik	NP_083880.1	ILMN_2736521	000270070	S	719	CGCAGACAAGGACTTTAGAAAGCATCGTAGCCGTGTGGCCTACTTTAGCC	3	-	105800062-105800111	3qF2.2	Mus musculus RIKEN cDNA 1700027A23 gene (1700027A23Rik), mRNA.				MGC58817	MGC58817
Mus musculus	Riken	ILMN_201865	ILMN_201865	3230401L03RIK	ri|3230401L03|PX00010K02|AK014327|2086					AK014327	3230401L03Rik		ILMN_2545192	004540731	S	1530	TGCCAGGTAACTCACTTTAGACATTCAGCAGAAGAAACAGGCTTTGTGGA										
Mus musculus	RefSeq	ILMN_209555	ILMN_312482	LOC100044475	XM_001472256.1	XM_001472256.1		100044475	149233947	XM_001472256.1	LOC100044475	XP_001472306.1	ILMN_2596917	003120091	S	2384	CCTACAATTGAAGAAGGGGTCTTGGGATCCCCTAAACTTGCATACCCGGT					PREDICTED: Mus musculus similar to SH2/SH3 adaptor protein (LOC100044475), mRNA.					
Mus musculus	RefSeq	ILMN_222766	ILMN_222766	NRL	NM_008736.2	NM_008736.2		18185	133892674	NM_008736.2	Nrl	NP_032762.1	ILMN_2754407	000130167	S	1792	CCTCTCAGAGCTGAAGTGAGACCTCACAGGATAACAGGGAGCCGAGAGAC	14	-	56138395-56138444	14qC3	Mus musculus neural retina leucine zipper gene (Nrl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of rhodopsin gene expression. This includes transcriptional, translational, or posttranslational regulation [goid 7468] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of rhodopsin gene expression [goid 45872] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of rhodopsin gene expression [goid 45872] [evidence IGI]; Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light [goid 46548] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	AW492574; D14H14S46E	AW492574; D14H14S46E
Mus musculus	RefSeq	ILMN_218695	ILMN_218695	NXT2	NM_172782.2	NM_172782.2		237082	142378725	NM_172782.2	Nxt2	NP_766370.1	ILMN_1245658	002680754	S	2216	GCCCAGTCACTGCCCTTTCTATTGGTGGAGAACAATCGCAAAATCTGTGT	X	+	138673997-138674046	XqF2	Mus musculus nuclear transport factor 2-like export factor 2 (Nxt2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI787442; 6330587F24Rik; P15-2	AI787442; 6330587F24Rik; P15-2
Mus musculus	RefSeq	ILMN_200290	ILMN_200290	LOC386146	XM_359092.1	XM_359092.1			38081232	XM_359092.1	LOC386146		ILMN_1242871	000110273	S	1131	CTGCTGGTGGGATTGCAAGCTGGTACAACCACTGTGGAAGTCAGTCTGGT										
Mus musculus	RefSeq	ILMN_222296	ILMN_222296	9130401M01RIK	NM_029418.4	NM_029418.4		75758	148747516	NM_029418.4	9130401M01Rik	NP_083694.1	ILMN_2754054	007380465	S	928	GGAGAAGAACTTGAGGACTCAGCAGGAAATTGCAGGGAAAGTGAAGGACT				15qD1	Mus musculus RIKEN cDNA 9130401M01 gene (9130401M01Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI849328	AI849328
Mus musculus	RefSeq	ILMN_197965	ILMN_233420	EG433003	XM_484529.5	XM_484529.5		433003	149267402	XM_484529.5	EG433003	XP_484529.1	ILMN_1214722	000060152	S	250	GGGATCCATCTCTACAGTGGCAAAAATATTGAACTGGGCACAGCGAATGG	16	+	16275903-16275952	16qA2	PREDICTED: Mus musculus predicted gene, EG433003 (EG433003), mRNA.					
Mus musculus	RefSeq	ILMN_192555	ILMN_256110	ADAR	NM_001038587.2	NM_001038587.2		56417	142388349	NM_001038587.2	Adar	NP_001033676.1	ILMN_2489167	006520431	S	5597	CACCGTCTCTTAATACTTTCTGTAGTTGATTTGTCTGAACCGTGGCTGTC	3	+	89557094-89557143	3qF1	Mus musculus adenosine deaminase, RNA-specific (Adar), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s) [goid 16553] [evidence ISO]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags [goid 3692] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	mZaADAR; Adar1; AV242451	mZaADAR; Adar1; AV242451
Mus musculus	RefSeq	ILMN_187109	ILMN_256110	ADAR	NM_001038587.2	NM_001038587.2		56417	142388349	NM_001038587.2	Adar	NP_001033676.1	ILMN_2441249	003140377	S	2341	ACAGGGGCCAGTCTCAGAAGAACTATGCTCCTCCTTTCCAGGTCCCCAGA	3	+	89549458-89549507	3qF1	Mus musculus adenosine deaminase, RNA-specific (Adar), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s) [goid 16553] [evidence ISO]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags [goid 3692] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	mZaADAR; Adar1; AV242451	mZaADAR; Adar1; AV242451
Mus musculus	RefSeq	ILMN_218949	ILMN_257507	4933411G06RIK	XM_621219.3	XM_621219.3		71090	94388071	XM_621219.3	4933411G06Rik	XP_621219.1	ILMN_1253122	000020170	S	630	CCTCAGCTCCTTTAGAATACGCACCGCGAGGCTGCCCTTCTTGGGACAAG	10	-	51476321-51476370	10qB3	PREDICTED: Mus musculus RIKEN cDNA 4933411G06 gene (4933411G06Rik), mRNA.					
Mus musculus	MEEBO	ILMN_186819	ILMN_186819	4921517B04RIK	scl22474.15.1_211				51708485	XM_357332	4921517B04Rik		ILMN_1232022	001570592	S	5944	GGGGAAGCAACTCCGTTGTCTGTAAAATGCCAGGGTTTGCCTAGATTAGA										
Mus musculus	RefSeq	ILMN_193901	ILMN_235106	4933407H18RIK	NM_001081101.1	NM_001081101.1		71101	124487375	NM_001081101.1	4933407H18Rik	NP_001074570.1	ILMN_2501480	004810768	S	9509	CTGTGAGGTAACGTCGGCTTCGTTGTTTGCATTTGGGACTTTCATTGTCC	5	+	33764586-33764635	5qB1	Mus musculus RIKEN cDNA 4933407H18 gene (4933407H18Rik), mRNA.				D330017J19Rik; mKIAA1530	D330017J19Rik; mKIAA1530
Mus musculus	RefSeq	ILMN_209122	ILMN_209122	SLC5A8	NM_145423.2	NM_145423.2		216225	110347554	NM_145423.2	Slc5a8	NP_663398.2	ILMN_1241067	001980300	S	3906	CTTCCTGTAAGACAAAGTATATCCTTGTGAGATTTGGAAATACCACTGTC	10	+	88390835-88390884	10qC1	Mus musculus solute carrier family 5 (iodide transporter), member 8 (Slc5a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SMCT; Ait; MGC19357	SMCT; Ait; MGC19357
Mus musculus	RefSeq	ILMN_209122	ILMN_209122	SLC5A8	NM_145423.2	NM_145423.2		216225	110347554	NM_145423.2	Slc5a8	NP_663398.2	ILMN_2739384	004540438	S	5072	CCAAGGTAAAGGGCTGCGGTTCAGCGGTAAAACTCTTACTGAGCTTGTGC	10	+	88392001-88392050	10qC1	Mus musculus solute carrier family 5 (iodide transporter), member 8 (Slc5a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SMCT; Ait; MGC19357	SMCT; Ait; MGC19357
Mus musculus	RefSeq	ILMN_212088	ILMN_212088	SIM1	NM_011376.3	NM_011376.3		20464	153945859	NM_011376.3	Sim1	NP_035506.2	ILMN_1237780	003390291	S	7192	GTAAAGTAGGAAATAATAGCTATGTCAATGATATCTTGCAAAGTGTCCCC				10qB3	Mus musculus single-minded homolog 1 (Drosophila) (Sim1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]		
Mus musculus	RefSeq	ILMN_198556	ILMN_198556	LOC245408	XM_205226.2	XM_205226.2			38086145	XM_205226.2	LOC245408		ILMN_1244573	007100619	S	1141	GGAGTCCAGAGGAACCAGCAAGCAAATGGCACAAAGCCAGAGTCCTCCAC										
Mus musculus	MEEBO	ILMN_192946	ILMN_192946	SCL0003949.1_31	scl0003949.1_31	AK007474.1			12841042	AK007474.1	scl0003949.1_31		ILMN_2492805	000630180	S	16	TGGCGAGTGTCCGGGGAGTCATTTTCCTCCTTAATCATTCAGGTCCTATC										
Mus musculus	RefSeq	ILMN_222015	ILMN_222015	HEPH	NM_181273.2	NM_181273.2		15203	31342175	NM_181273.2	Heph	NP_851790.1	ILMN_2743476	004390746	S	497	GGGCTTTACTGTTGATGCACTCCTTGTGGTCTATACCAACTGATGGGGCC	X	+	92665668-92665717	XqC3	Mus musculus hephaestin (Heph), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence TAS]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Cpl; sla; C130006F04Rik; mKIAA0698	Cpl; sla; C130006F04Rik; mKIAA0698
Mus musculus	MEEBO	ILMN_196243	ILMN_196243	SLC12A3	scl33487.24.1_196				14547896	NM_019415	Slc12a3		ILMN_1214122	002030349	S	8	GCTGGAGAAGAGGCTTCAAGTTCTACTGTATCATCCCATCCATCAGCGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	Riken	ILMN_203252	ILMN_203252	8030406F08RIK	ri|8030406F08|PX00102L15|AK033091|1757					AK033091	8030406F08Rik		ILMN_1239436	000050711	S	1611	GACCAAAGAGCAAGAACAGAAGGGTGGGTGGGAATTGCTGCCAGGTGCCC										
Mus musculus	RefSeq	ILMN_235462	ILMN_235462	AYM1	NM_001012726.1	NM_001012726.1		503692	60678283	NM_001012726.1	Aym1	NP_001012744.1	ILMN_3162325	006760274	S	104	GGCAGAGCACTGAGACCAAGACAGAGGACACCACTCAGAAATGCCAGGGC	5	+	113786417-113786466	5qF	Mus musculus activator of yeast meiotic promoters 1 (Aym1), mRNA.	The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; The nucleus of the female germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1674] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_191545	ILMN_191545	V1RC3	NM_053233.1	NM_053233.1		113860	16716548	NM_053233.1	V1rc3	NP_444463.1	ILMN_2895819	004810020	S	616	CAGAGGCAGTGCAAGCATCTTCATAGCATCAGACACCTGAGAGCATCCCC	6	+	57087962-57088011	6qB3	Mus musculus vomeronasal 1 receptor, C3 (V1rc3), mRNA.		The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]	MGC129505; MGC129504	MGC129505; MGC129504
Mus musculus	RefSeq	ILMN_217972	ILMN_326923	9430024E24RIK	XM_001479724.1	XM_001479724.1		77257	149249192	XM_001479724.1	9430024E24Rik	XP_001479774.1	ILMN_2689973	006370246	S	408	ATTAAAATATTCACCCAGCTGCTCTTCCCTTGCCAAGGGGACCCAAAGGA					PREDICTED: Mus musculus RIKEN cDNA 9430024E24 gene (9430024E24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222929	ILMN_222929	ECEL1	NM_021306.2	NM_021306.2		13599	40254535	NM_021306.2	Ecel1	NP_067281.2	ILMN_2756900	004860343	S	2323	AGGACTCTCCCATGAACCCCGTCCATAAGTGCTCTGTGTGGTGAGCCTGG	1	-	89044555-89044561:89044562-89044604	1qD	Mus musculus endothelin converting enzyme-like 1 (Ecel1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]	DINE; xce	DINE; xce
Mus musculus	MEEBO	ILMN_186893	ILMN_186893	ZPBP	scl40516.8_51				7657604	NM_015785	Zpbp		ILMN_2504294	001110678	S	14	GGAACCCTTCAGATGGTGTGGGTGAACCGCTGCTTTCCAGGGTATGGCAT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_186893	ILMN_186893	ZPBP	scl40516.8_51				7657604	NM_015785	Zpbp		ILMN_1222487	003140201	S	1	ACTGAAATGTTTATCTCATGTTTGTCTCGTGTAACAGGATCATGCGTGAG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_203365	ILMN_203365	CYP2J9	ri|9330128L06|PX00105D09|AK033961|2413					AK033961	Cyp2j9		ILMN_1230021	002320161	S	1635	GGCTCCACCTTTCTAAGGTATCACATTTCTCCAGGAATTTACTGACTGCC							The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195901	ILMN_195901	ZFP101	NM_009542.2	NM_009542.2		22643	119120796	NM_009542.2	Zfp101	NP_033568.2	ILMN_2519789	001430634	S	2104	GGGCCACGCGAGATAGCTTAGCTAGTCATGGTTCTTTAGGATAGCCTGAT	17	-	33517701-33517750	17qB1	Mus musculus zinc finger protein 101 (Zfp101), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI325003; AI316498	AI325003; AI316498
Mus musculus	RefSeq	ILMN_222845	ILMN_222845	COCH	NM_007728.4	NM_007728.4		12810	145966715	NM_007728.4	Coch	NP_031754.1	ILMN_2755676	002070288	S	2039	GGATTAACATTGGGAGTTCAAATATGCATTCAAGTGGATAGGTAAGCTAC				12qC1	Mus musculus coagulation factor C homolog (Limulus polyphemus) (Coch), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Coch-5B2; AW122937; D12H14S564E	Coch-5B2; AW122937; D12H14S564E
Mus musculus	RefSeq	ILMN_216489	ILMN_216489	CBFB	NM_022309.2	NM_022309.2		12400	31981853	NM_022309.2	Cbfb	NP_071704.2	ILMN_2837855	005960672	S	2506	GGTGGTACATTTTCTCTGTTGCTTCTCGCCAAGAGCTTCCAGTCCGGCAG	8	+	108106741-108106790	8qD3	Mus musculus core binding factor beta (Cbfb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized precursor cell acquires specialized features of B cells, T cells, or natural killer cells [goid 30098] [evidence IMP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PEBP2b; Pebp2; PEA2; Pebpb2; AI893578	PEBP2b; Pebp2; PEA2; Pebpb2; AI893578
Mus musculus	MEEBO	ILMN_216735	ILMN_216735	BC031147	scl54506.27.1_189				51772565	XM_486812	BC031147		ILMN_1213103	001780327	S	4661	GTAAGTAATGTCAGCCCTGACCTAATATTTAAAAAGTCAGCATATCGCTG										
Mus musculus	RefSeq	ILMN_211723	ILMN_211723	BNIPL	NM_134253.1	NM_134253.1		171388	19527417	NM_134253.1	Bnipl	NP_599014.1	ILMN_2834971	007050681	S	1329	AACCCCAGAACGGGGTGGGGGGTGGCTTGCATTTCGGCTGTCCAAAAAGA	3	-	95045533-95045582	3qF2.1	Mus musculus BCL2/adenovirus E1B 19kD interacting protein like (Bnipl), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BNIPL-2; BNIP-S; PP73; BNIPL-1; BNIPL1; BNIPL2; 1700128A13Rik; PP753; MGC8103	BNIPL-2; BNIP-S; PP73; BNIPL-1; BNIPL1; BNIPL2; 1700128A13Rik; PP753; MGC8103
Mus musculus	RefSeq	ILMN_211723	ILMN_211723	BNIPL	NM_134253.1	NM_134253.1		171388	19527417	NM_134253.1	Bnipl	NP_599014.1	ILMN_2834972	007320373	S	1558	TGTCTGCCGGGAGCCCAGGAGCCAGCTTGCAAAATCTTGAAAAGCCAACC	3	-	95045304-95045353	3qF2.1	Mus musculus BCL2/adenovirus E1B 19kD interacting protein like (Bnipl), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BNIPL-2; BNIP-S; PP73; BNIPL-1; BNIPL1; BNIPL2; 1700128A13Rik; PP753; MGC8103	BNIPL-2; BNIP-S; PP73; BNIPL-1; BNIPL1; BNIPL2; 1700128A13Rik; PP753; MGC8103
Mus musculus	RefSeq	ILMN_211723	ILMN_211723	BNIPL	NM_134253.1	NM_134253.1		171388	19527417	NM_134253.1	Bnipl	NP_599014.1	ILMN_1213321	001500661	S	1386	GTGGCATTGGAAGTGTAAGGCTCTGAGTTTTAATTCTGCTTTAGCTGTAA	3	-	95045476-95045525	3qF2.1	Mus musculus BCL2/adenovirus E1B 19kD interacting protein like (Bnipl), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BNIPL-2; BNIP-S; PP73; BNIPL-1; BNIPL1; BNIPL2; 1700128A13Rik; PP753; MGC8103	BNIPL-2; BNIP-S; PP73; BNIPL-1; BNIPL1; BNIPL2; 1700128A13Rik; PP753; MGC8103
Mus musculus	RefSeq	ILMN_215435	ILMN_320229	LOC640963	XR_033637.1	XR_033637.1		640963	149254142	XR_033637.1	LOC640963		ILMN_2659456	002190711	S	465	GCCTTCAGTGGATCTCAATATGAACCTGCAGGCCACGTTGAACATCATGG	5	-	105013125-105013174	5qE5	PREDICTED: Mus musculus similar to STAT3-interacting protein as a repressor (LOC640963), misc RNA.					
Mus musculus	RefSeq	ILMN_219913	ILMN_219913	CRISP2	NM_009420.1	NM_009420.1		22024	6678422	NM_009420.1	Crisp2	NP_033446.1	ILMN_2715114	001770360	S	1175	ACTGAATCAAGTGGAGAATTTTGAAAGTTGCACCATATCAGGTCATTCAC	17	-	40901871-40901920	17qB2	Mus musculus cysteine-rich secretory protein 2 (Crisp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Tpx1; Tpx-1; GAPDL5; CRISP-2	Tpx1; Tpx-1; GAPDL5; CRISP-2
Mus musculus	RefSeq	ILMN_197478	ILMN_325368	LOC100044700	XM_001472761.1	XM_001472761.1		100044700	149250561	XM_001472761.1	LOC100044700	XP_001472811.1	ILMN_1247766	003610458	S	232	TTGTCTGGCCTGAGCATCCACAGAGAAGCTGGCTGGAGTACAGGCTGTCT					PREDICTED: Mus musculus hypothetical protein LOC100044700 (LOC100044700), mRNA.					
Mus musculus	RefSeq	ILMN_221873	ILMN_221873	FOXA1	NM_008259.3	NM_008259.3		15375	118130879	NM_008259.3	Foxa1	NP_032285.2	ILMN_1237195	000430670	S	2633	CCTTCCTCCCTAATTCTGCTCTTGCTTTTCAGAGAGCCATCATGGTCATG	12	-	58642123-58642172	12qC1	Mus musculus forkhead box A1 (Foxa1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]; The process by which the anatomical structures of a tube are generated and organized. Morphogenesis pertains to the creation of form. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system [goid 35239] [evidence IMP]; The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2070] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed [goid 48665] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Tcf-3a; Tcf3a; Hnf-3a; Hnf3a	Tcf-3a; Tcf3a; Hnf-3a; Hnf3a
Mus musculus	RefSeq	ILMN_209244	ILMN_209244	KLHL4	NM_172781.1	NM_172781.1		237010	27370151	NM_172781.1	Klhl4	NP_766369.1	ILMN_2904617	001340228	S	3028	TCCCGTAGGAGATGGTAAGGATAAATGTACTACAACTACACATTTGAAGG	X	+	111674069-111674118	XqE1	Mus musculus kelch-like 4 (Drosophila) (Klhl4), mRNA.				B130014A11; C130018J01Rik; MGC107454	B130014A11; C130018J01Rik; MGC107454
Mus musculus	RefSeq	ILMN_209244	ILMN_209244	KLHL4	NM_172781.1	NM_172781.1		237010	27370151	NM_172781.1	Klhl4	NP_766369.1	ILMN_1233898	005490270	S	2745	GAGTATTATATTGTTACAAACTGTGACCTAAGCTTCAGAATGTGAGTGCC	X	+	111673786-111673835	XqE1	Mus musculus kelch-like 4 (Drosophila) (Klhl4), mRNA.				B130014A11; C130018J01Rik; MGC107454	B130014A11; C130018J01Rik; MGC107454
Mus musculus	RefSeq	ILMN_215587	ILMN_215587	HCRTR2	NM_198962.3	NM_198962.3		387285	146198770	NM_198962.3	Hcrtr2	NP_945200.1	ILMN_1214142	003520743	S	3348	TTGTCTGAGTCAGAATTTTCCTCTGCTTGTGACTTAGAATAATAACCCCC				9qD	Mus musculus hypocretin (orexin) receptor 2 (Hcrtr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with orexin to initiate a change in cell activity [goid 16499] [evidence IDA]	mOX2bR; mOXR2; OX2R; mOX2aR	mOX2bR; mOXR2; OX2R; mOX2aR
Mus musculus	RefSeq	ILMN_213219	ILMN_213219	REV1	NM_019570.3	NM_019570.3		56210	50811869	NM_019570.3	Rev1	NP_062516.2	ILMN_2928573	003870474	S	3565	AGGAATGGCTTCAGAGAGACCCCTGGAAGAAGTCTCGGCTTCTACCCCTG	1	-	38110816-38110841:38110929-38110952	1qB	Mus musculus REV1 homolog (S. cerevisiae) (Rev1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication, without removing the replication-blocking lesions, and with an increase in the endogenous mutation level. For example, in E. coli, a low fidelity DNA polymerase, pol V, copies lesions that block replication fork progress. This produces mutations specifically targeted to DNA template damage sites, but it can also produce mutations at undamaged sites [goid 42276] [evidence IDA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Catalysis of the insertion of a dCMP residue opposite a template abasic site in DNA [goid 17125] [evidence IDA]	Rev1l; AU022044; 1110027I23Rik; MGC66950	Rev1l; AU022044; 1110027I23Rik; MGC66950
Mus musculus	Riken	ILMN_203858	ILMN_203858	A630002C06RIK	ri|A630002C06|PX00144G14|AK041329|1699					AK041329	A630002C06Rik		ILMN_2560494	003390082	S	1635	GCTGCAGGAAGGAGCAAGAGTTGAAGTTGGAAGTGGTCTATCTCAAGAGC										
Mus musculus	RefSeq	ILMN_219626	ILMN_219626	KRTAP14	NM_013707.2	NM_013707.2		23927	142350453	NM_013707.2	Krtap14	NP_038735.2	ILMN_2711452	001660091	S	787	TACTCAGACTTCCGGTCTTGATTTTTGCAAAGAGGAAGGTTGTAAGTTTA	16	-	88825554-88825603	16qC3.3	Mus musculus keratin associated protein 14 (Krtap14), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			MGC129169; mKAP13; Pmg1; AA589630; MGC129168	MGC129169; mKAP13; Pmg1; AA589630; MGC129168
Mus musculus	Riken	ILMN_202270	ILMN_202270	GPA33	ri|2210401D16|ZX00051O04|AK008784|773					AK008784	Gpa33		ILMN_2548292	006760465	S	528	CGAGTCCGCCTCTTGGTCCTTGAGGATTTCAAACAAATGGCAAGAATCGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]				
Mus musculus	RefSeq	ILMN_187850	ILMN_244100	RGP1	NM_172866.3	NM_172866.3		242406	144922687	NM_172866.3	Rgp1	NP_766454.1	ILMN_2610190	004070068	S	1443	CACCAGCAGTATAACTATCTGAAACTGGCTCACATGCCCACCATGGCAAC	4	+	43595934-43595955:43595956-43595983	4qB1	Mus musculus RGP1 retrograde golgi transport homolog (S. cerevisiae) (Rgp1), mRNA.				RP23-191F22.3; mKIAA0258; F730001J03; AI527196	RP23-191F22.3; mKIAA0258; F730001J03; AI527196
Mus musculus	RefSeq	ILMN_187850	ILMN_244100	RGP1	NM_172866.3	NM_172866.3		242406	144922687	NM_172866.3	Rgp1	NP_766454.1	ILMN_2447658	007330707	S	5603	CGTTGGCCTGTGACCATAAAGATAGTGGATGGTGTAAGAAGAAGGTTCCC	4	+	43600094-43600143	4qB1	Mus musculus RGP1 retrograde golgi transport homolog (S. cerevisiae) (Rgp1), mRNA.				RP23-191F22.3; mKIAA0258; F730001J03; AI527196	RP23-191F22.3; mKIAA0258; F730001J03; AI527196
Mus musculus	RefSeq	ILMN_187850	ILMN_244100	RGP1	NM_172866.3	NM_172866.3		242406	144922687	NM_172866.3	Rgp1	NP_766454.1	ILMN_2710589	004120619	S	1278	ATCCCGAGAACCAGGATTGGTACTTCTGCCGCCATTGGAGCAGCCTGAGC	4	+	43595769-43595818	4qB1	Mus musculus RGP1 retrograde golgi transport homolog (S. cerevisiae) (Rgp1), mRNA.				RP23-191F22.3; mKIAA0258; F730001J03; AI527196	RP23-191F22.3; mKIAA0258; F730001J03; AI527196
Mus musculus	RefSeq	ILMN_189981	ILMN_232816	SGK1	NM_011361.1	NM_011361.1		20393	6755489	NM_011361.1	Sgk1	NP_035491.1	ILMN_1213954	004900519	S	2109	GGACCAATGCCCCAGTTGTCAGTCAAAGCCGTTGGTGTTTTCATTGTTTA	10	+	21719392-21719441	10qA3	Mus musculus serum/glucocorticoid regulated kinase 1 (Sgk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	Sgk1	Sgk1
Mus musculus	RefSeq	ILMN_223105	ILMN_223105	TGDS	NM_029578.2	NM_029578.2		76355	42475986	NM_029578.2	Tgds	NP_083854.2	ILMN_2759436	003800176	S	254	ACTTTGTGAAGTTGCTGTTTGAAGTGGAGAAAATAGATATAGTACTGCAC	14	-	118526726-118526775	14qE4	Mus musculus TDP-glucose 4,6-dehydratase (Tgds), mRNA.		The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: dTDP-glucose = dTDP-4-dehydro-6-deoxy-D-glucose + H2O [goid 8460] [evidence IEA]	2610025M23Rik; AI648925; 2610017J16Rik	2610025M23Rik; AI648925; 2610017J16Rik
Mus musculus	RefSeq	ILMN_197105	ILMN_197105	LOC381327	XM_355282.1	XM_355282.1			38074106	XM_355282.1	LOC381327		ILMN_2526926	003610632	S	298	AAACCAAGAAATGTACAGATTTTGAATATGGTGACTAGGCAAGGAGCACT										
Mus musculus	RefSeq	ILMN_220956	ILMN_220956	PCDH18	NM_130448.2	NM_130448.2		73173	31982588	NM_130448.2	Pcdh18	NP_569715.2	ILMN_2729113	001690195	S	4558	CTTATAAACGAAACTAAACGGTGAATCTGATTTGATCCTTGCCCTATGAA	3	-	49547743-49547792	3qC	Mus musculus protocadherin 18 (Pcdh18), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence ISO]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH68L; 3110038E07Rik; BB095589	PCDH68L; 3110038E07Rik; BB095589
Mus musculus	RefSeq	ILMN_238862	ILMN_238862	BC061212	NM_198667.1	NM_198667.1		381724	38348567	NM_198667.1	BC061212	NP_941069.1	ILMN_3098894	000050309	A	448	CTGGTGCAGAGGATGGTAGCTGTTCTTCAGAGCCCTTGGATGAGAAGCCT	5	-	94497473-94497522	5qE3	Mus musculus cDNA sequence BC061212 (BC061212), mRNA.				MGC74356	MGC74356
Mus musculus	RefSeq	ILMN_238862	ILMN_238862	BC061212	NM_198667.1	NM_198667.1		381724	38348567	NM_198667.1	BC061212	NP_941069.1	ILMN_3026128	004730731	I	1275	GACTTCTCCATGCCCATCCTGAAGGACCTTTTACAGCACACAGCCAACTG	5	-	94495749-94495798	5qE3	Mus musculus cDNA sequence BC061212 (BC061212), mRNA.				MGC74356	MGC74356
Mus musculus	RefSeq	ILMN_216695	ILMN_216695	CHCHD3	NM_025336.1	NM_025336.1		66075	21313617	NM_025336.1	Chchd3	NP_079612.1	ILMN_1243188	007550743	S	869	GGCACTGGAAAATGGACTCAACTGAATCATAACGTGTTTTGATCAACAGT	6	-	32742740-32742789	6qA3.3	Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 3 (Chchd3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]			AW558177; 1700039J09Rik; 0610041L09Rik	AW558177; 1700039J09Rik; 0610041L09Rik
Mus musculus	RefSeq	ILMN_214530	ILMN_214530	TCAM1	NM_029467.3	NM_029467.3		75870	145279189	NM_029467.3	Tcam1	NP_083743.2	ILMN_1258927	004640072	S	2887	CTTGAAGTACATCAAGCCAGGTCTTTGCTCCAGAGCTGTCATGAAATGTC				11qE1	Mus musculus testicular cell adhesion molecule 1 (Tcam1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]		4930570F09Rik; AI429105	4930570F09Rik; AI429105
Mus musculus	Riken	ILMN_204490	ILMN_204490	B130066H02RIK	ri|B130066H02|PX00158P04|AK045341|4142					AK045341	B130066H02Rik		ILMN_1238902	006480487	S	3791	GGACGAGGTTCCAGGGAGCACATTTACATGGCAGCTTTCACAGGGTGCCT										
Mus musculus	RefSeq	ILMN_201244	ILMN_201244	LOC382107	XM_356192.1	XM_356192.1			38090115	XM_356192.1	LOC382107		ILMN_1255388	002940086	S	637	TGGCCCAATTGTCTTGGTAAGTGACCCCCTTATCTGGAATAGTCACACAG										
Mus musculus	RefSeq	ILMN_200828	ILMN_229619	LOC674071	XM_973682.1	XM_973682.1		674071	94407927	XM_973682.1	LOC674071	XP_978776.1	ILMN_2540151	002810491	S	241	TTAAACCAAAGTTTGATCCCCCAACAAATACCAAATAATAGGGGGTCCTG					PREDICTED: Mus musculus similar to paraneoplastic antigen MA1 (LOC674071), mRNA.					
Mus musculus	RefSeq	ILMN_233749	ILMN_233749	OLFR132	NM_001005481.1	NM_001005481.1		257889	53828685	NM_001005481.1	Olfr132	NP_001005481.1	ILMN_3162014	003990537	S	469	CTGATCCAATCTACTGCTACCCTCAGGTTGCCCTTTTGCTCTCAGCGGGT	17	-	38267617-38267666	17qB1	Mus musculus olfactory receptor 132 (Olfr132), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-49	MOR256-49
Mus musculus	RefSeq	ILMN_201535	ILMN_250912	EG624124	XM_889835.2	XM_889835.2		624124	94408441	XM_889835.2	EG624124	XP_894928.1	ILMN_2710068	000160088	S	507	GGGTAAGAGGATCCGTGTGAAACTGGATGGCAGCCGGCTCATAAAAGTTC	X	-	149344194-149344243	XqF3	PREDICTED: Mus musculus predicted gene, EG624124, transcript variant 1 (EG624124), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_217519	ILMN_217519	DDX59	NM_026500.2	NM_026500.2		67997	142362902	NM_026500.2	Ddx59	NP_080776.1	ILMN_2684222	005310044	S	2060	TATCACCAAAATTTCTAATAATACTGTATGACCTAGTCAATAAACTTGGA	1	+	138336629-138336678	1qE4	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (Ddx59), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	4833411G06Rik; 1210002B07Rik	4833411G06Rik; 1210002B07Rik
Mus musculus	RefSeq	ILMN_217519	ILMN_217519	DDX59	NM_026500.2	NM_026500.2		67997	142362902	NM_026500.2	Ddx59	NP_080776.1	ILMN_1233683	004060523	S	2061	ATCACCAAAATTTCTAATAATACTGTATGACCTAGTCAATAAACTTGGAC	1	+	138336630-138336679	1qE4	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (Ddx59), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	4833411G06Rik; 1210002B07Rik	4833411G06Rik; 1210002B07Rik
Mus musculus	RefSeq	ILMN_212101	ILMN_212101	CCBL2	NM_173763.2	NM_173763.2		229905	31343396	NM_173763.2	Ccbl2	NP_776124.1	ILMN_2994977	006860059	S	1899	GCAGGCTCATTCAGTGTAAAGTCTGGCAACCTACAAGCCCTCACAGGAGG	3	+	142681949-142681998	3qH1	Mus musculus cysteine conjugate-beta lyase 2 (Ccbl2), mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the reaction: L-kynurenine + 2-oxoglutarate = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-glutamate [goid 16212] [evidence IEA]; Catalysis of the reaction: RS-CH2-CH(NH3+)COO- = RSH + NH3 + pyruvate [goid 47804] [evidence IEA]	KATIII; C430041M20; Kat3; BC037135	KATIII; C430041M20; Kat3; BC037135
Mus musculus	MEEBO	ILMN_224022	ILMN_224022	C630028N24RIK	scl36934.5_383				31340668	NM_177351	C630028N24Rik		ILMN_2773316	003120551	S	2298	CCCAGTTGGCCTAGAACAAATTTATGAAGGATTTTTGTGCAGAGTTAAAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210172	ILMN_226132	2410089E03RIK	XR_001543.2	XR_001543.2		73692	149266333	XR_001543.2	2410089E03Rik		ILMN_1231226	007040739	S	3710	AGGGTATGGACTTACCATTAAATATGATACCAGCACAGATTTTCCAGGAA				15qA1	PREDICTED: Mus musculus RIKEN cDNA 2410089E03 gene (2410089E03Rik), misc RNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_196440	ILMN_226132	2410089E03RIK	XR_001543.2	XR_001543.2		73692	149266333	XR_001543.2	2410089E03Rik		ILMN_1238050	005050397	S	2704	GCTGTCCCGGCAGCCGCTGATGAAAGTAGACCGGCAGAGCTAGACTCATT				15qA1	PREDICTED: Mus musculus RIKEN cDNA 2410089E03 gene (2410089E03Rik), misc RNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_189889	ILMN_256950	QK	NM_021881.1	NM_021881.1		19317	11527387	NM_021881.1	Qk	NP_068681.1	ILMN_1253485	007400711	S	6507	TGCAGAGTATAGCTTTGAAATTGAATAAAGAAAGTGTTTGTAGTTTTAAA	17	-	10403234-10403283	17qA1	Mus musculus quaking (Qk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process by which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal [goid 8366] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IMP]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence TAS]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	1500005P18; l17Wis1; l(17)-1Wis; QkI	1500005P18; l17Wis1; l(17)-1Wis; QkI
Mus musculus	RefSeq	ILMN_193611	ILMN_241450	NUFIP2	NM_001024205.1	NM_001024205.1		68564	66730552	NM_001024205.1	Nufip2	NP_001019376.1	ILMN_2498813	001340474	S	8247	TTTGGAAAGGCCATGTAGTAAATGCCTGAGATGTTGATGGTTCTTACCAC	11	+	77529332-77529381	11qB5	Mus musculus nuclear fragile X mental retardation protein interacting protein 2 (Nufip2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1110001M19Rik; 9530056D24Rik; PIG1; AI461731; mKIAA1321; AI256692	1110001M19Rik; 9530056D24Rik; PIG1; AI461731; mKIAA1321; AI256692
Mus musculus	RefSeq	ILMN_209628	ILMN_241450	NUFIP2	NM_001024205.1	NM_001024205.1		68564	66730552	NM_001024205.1	Nufip2	NP_001019376.1	ILMN_1228820	007000095	S	4293	GGCATCCTTGAGCTTTAAAGCATTGAACAAACTGGAAAATGCAACACGCC	11	+	77525378-77525427	11qB5	Mus musculus nuclear fragile X mental retardation protein interacting protein 2 (Nufip2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1110001M19Rik; 9530056D24Rik; PIG1; AI461731; mKIAA1321; AI256692	1110001M19Rik; 9530056D24Rik; PIG1; AI461731; mKIAA1321; AI256692
Mus musculus	RefSeq	ILMN_224792	ILMN_224792	EG545963	NM_001033792.1	NM_001033792.1		545963	85702114	NM_001033792.1	EG545963	NP_001028964.1	ILMN_3160824	006110484	S	1083	GTGGATTTGCTTTGTCGAGACGGAGTCTCACTGTATCCCAGCGCTACTGG	7	-	53038705-53038754	7qB4	Mus musculus predicted gene, EG545963 (EG545963), mRNA.					
Mus musculus	Riken	ILMN_201614	ILMN_201614	1100001L02RIK	ri|1100001L02|R000005F24|AK003189|1279					AK003189	1100001L02Rik		ILMN_1238096	004060458	S	254	GGCATAACGCACAGCAGGGAAGGGTATTGGTAACGGGTGGGTAATCAGCC										
Mus musculus	RefSeq	ILMN_197393	ILMN_311600	LOC667005	XR_030797.1	XR_030797.1		667005	149265183	XR_030797.1	LOC667005		ILMN_1217929	000540438	S	71	GAACCTCTGCTTTCGGAGGAGCCATGGTGCTCAGGGTCACTAGGAACACA				14qA1	PREDICTED: Mus musculus similar to cyclin B1 (LOC667005), misc RNA.					
Mus musculus	RefSeq	ILMN_211835	ILMN_211835	4933429F08RIK	NM_177828.3	NM_177828.3		328967	142387990	NM_177828.3	4933429F08Rik	NP_808496.1	ILMN_2619961	004570369	S	2566	GCGTGACACTAACAAAAAGACTGTTAGTGGCGTCGGGATGGCGCAGCCAT	18	-	61653493-61653542	18qE1	Mus musculus RIKEN cDNA 4933429F08 gene (4933429F08Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199674	ILMN_319632	LOC100046355	XM_001476585.1	XM_001476585.1		100046355	149265282	XM_001476585.1	LOC100046355	XP_001476635.1	ILMN_2536080	000540010	S	1019	CCATGTATGGGCGTGGCTCCCCTCGAGTTCCTGCGATTTTTGTGGTCAAC					PREDICTED: Mus musculus similar to Collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase, transcript variant 1 (LOC100046355), mRNA.					
Mus musculus	RefSeq	ILMN_210130	ILMN_210130	TSPAN18	NM_183180.1	NM_183180.1		241556	34147225	NM_183180.1	Tspan18	NP_899003.1	ILMN_2602538	006180524	S	3294	GCAGTGGCCTAAGGGACAGCTGTATCTGACAGGCGAGGAGCTAAGACTGG	2	-	93042201-93042250	2qE1	Mus musculus tetraspanin 18 (Tspan18), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610042G18Rik; BB226562; 6720430O15	2610042G18Rik; BB226562; 6720430O15
Mus musculus	RefSeq	ILMN_210130	ILMN_210130	TSPAN18	NM_183180.1	NM_183180.1		241556	34147225	NM_183180.1	Tspan18	NP_899003.1	ILMN_1227699	002320035	S	2094	CTGCAGACTTAACCCCACAGCATCTCCTACCGTGACACCTTCTGACCTTT	2	-	93043487-93043536	2qE1	Mus musculus tetraspanin 18 (Tspan18), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610042G18Rik; BB226562; 6720430O15	2610042G18Rik; BB226562; 6720430O15
Mus musculus	Riken	ILMN_205248	ILMN_205248	E230026L02RIK	ri|E230026L02|PX00210F03|AK054190|1804					AK054190	E230026L02Rik		ILMN_2571110	007650128	S	1	GAGGTGACCAGAAAATGGAGGCGAATCTGTACTTGGTGTTAACTGCTCCA										
Mus musculus	Riken	ILMN_202901	ILMN_202901	4833418A01RIK	ri|6530411J06|PX00048H08|AK032671|2491					AK032671	4833418A01Rik		ILMN_1254234	004730600	S	2303	AGATTTTCTAGGAGCTGACTCCGGCCCTGGTTTGACTGTTCACCTCCAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_201702	ILMN_260018	1700014N06RIK	XM_906752.2	XM_906752.2		69389	94408203	XM_906752.2	1700014N06Rik	XP_911845.1	ILMN_1259771	000060722	S	670	GCTGAAGGAACCATGGCGATGGTCCGGTATATCTCCAACAAGTAAGCAGC				XqF1	PREDICTED: Mus musculus RIKEN cDNA 1700014N06 gene (1700014N06Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210694	ILMN_232749	BC033915	NM_027498.2	NM_027498.2		70661	51890216	NM_027498.2	BC033915	NP_081774.2	ILMN_1237769	001450546	S	167	ATCGGCTACTACGAGATCGACCGCACCATCGGCAAGGGCAACTTCGCTGT	9	+	45821127-45821176	9qA5.2	Mus musculus cDNA sequence BC033915 (BC033915), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI849445; MGC90906; AI846254; AI447252; 5730525O22Rik; mKIAA0999; MGC91236	AI849445; MGC90906; AI846254; AI447252; 5730525O22Rik; mKIAA0999; MGC91236
Mus musculus	RefSeq	ILMN_199970	ILMN_199970	LOC381604	XM_355559.1	XM_355559.1			38079314	XM_355559.1	LOC381604		ILMN_2537131	006590463	S	507	CAGCAAGGCCCGGTAGGCAGTGCCACCCTTTTATGTGGATATGTCTGTGA										
Mus musculus	RefSeq	ILMN_219683	ILMN_219683	DMRTA1	NM_175647.3	NM_175647.3		242523	118130309	NM_175647.3	Dmrta1	NP_783578.1	ILMN_2712159	000240445	S	3960	GGTATGAGAAAGGATTATGCCTGCTTGTTTCTTTACAGCTTTGTATGGTG	4	+	89361344-89361393	4qC5	Mus musculus doublesex and mab-3 related transcription factor like family A1 (Dmrta1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Dmrt4	Dmrt4
Mus musculus	Riken	ILMN_207130	ILMN_207130	F730003H07RIK	ri|F730003H07|PL00002H24|AK089303|3735					AK089303	F730003H07Rik		ILMN_1259069	004290458	S	3293	TAACTGTGCACCTTCCCTGAAAGAGGAGAGCTTGCCTGCAGAGACTGCTC										
Mus musculus	RefSeq	ILMN_210074	ILMN_257271	SRGAP1	NM_001081037.1	NM_001081037.1		117600	124486649	NM_001081037.1	Srgap1	NP_001074506.1	ILMN_1225547	002900717	S	3136	ATGGGCGTCCAGCTGAAGCCCCCAGCCCTTAGGCCAAAGCCTGCTGTTCT	10	-	121222526-121222575	10qD2	Mus musculus SLIT-ROBO Rho GTPase activating protein 1 (Srgap1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IDA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]	4930572H05Rik; Arhgap13	4930572H05Rik; Arhgap13
Mus musculus	RefSeq	ILMN_200459	ILMN_244096	F430201B04RIK	NM_001039038.2	NM_001039038.2		621239	141802990	NM_001039038.2	F430201B04Rik	NP_001034127.1	ILMN_1246463	006330240	S	889	GTTTGCAGTTGGAGGGACTAAAGAGGCCCTTGGGTATGGCCTGTGCACCC	17	-	26080380-26080429	17qA3.3	Mus musculus RIKEN cDNA F430201B04 gene (F430201B04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187110	ILMN_262052	RALGPS1	NM_175211.2	NM_175211.2		241308	31340803	NM_175211.2	Ralgps1	NP_780420.1	ILMN_1235365	001430035	S	2658	CCTCTAAGAAAAGTTTGAAGGGAGTCCAGAAGCTCCGTGTTAAGGGTCCC	2	-	32959012-32959061	2qB	Mus musculus Ral GEF with PH domain and SH3 binding motif 1 (Ralgps1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	RALGPS1A; mKIAA0351; 5830418G11Rik; RALGEF2; AI854138; AI853783	RALGPS1A; mKIAA0351; 5830418G11Rik; RALGEF2; AI854138; AI853783
Mus musculus	RefSeq	ILMN_262052	ILMN_262052	RALGPS1	NM_175211.2	NM_175211.2		241308	31340803	NM_175211.2	Ralgps1	NP_780420.1	ILMN_2802843	004610113	S	2390	TGGATGGCGTTAATCTTCGAGAGGGCTGGAAAGCAGAGACGGGCTGCTGG	2	-	32959280-32959329	2qB	Mus musculus Ral GEF with PH domain and SH3 binding motif 1 (Ralgps1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	RALGPS1A; mKIAA0351; 5830418G11Rik; RALGEF2; AI854138; AI853783	RALGPS1A; mKIAA0351; 5830418G11Rik; RALGEF2; AI854138; AI853783
Mus musculus	RefSeq	ILMN_230396	ILMN_230396	9830134C10RIK	NM_001002786.1	NM_001002786.1		442827	50582588	NM_001002786.1	9830134C10Rik	NP_001002786.1	ILMN_3155815	000450088	A	3739	CGGGAACCATGGAGGACGGCTGCTTACTGGCTCACACACTGCCTAATGCT	17	+	28875893-28875942	17qA3.3	Mus musculus RIKEN cDNA 9830134C10 gene (9830134C10Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_230396	ILMN_230396	9830134C10RIK	NM_001002786.1	NM_001002786.1		442827	50582588	NM_001002786.1	9830134C10Rik	NP_001002786.1	ILMN_3076909	002760398	I	1019	GGACTGACTCCCGTGTCTTGGCTTCAGTGTCCTTGTGAGAATCTAGGCCC	17	+	28863357-28863406	17qA3.3	Mus musculus RIKEN cDNA 9830134C10 gene (9830134C10Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	Riken	ILMN_202855	ILMN_202855	4631422A03RIK	ri|4631422A03|PX00011H18|AK028475|2431					AK028475	4631422A03Rik		ILMN_1215783	004200136	S	2117	CTTACCGAAGTTGTTTGGGGAGGGGGTTCTGCTCGTTTTGGGGGTGGGGA										
Mus musculus	RefSeq	ILMN_215727	ILMN_215727	POLR1C	NM_009085.2	NM_009085.2		20016	119226250	NM_009085.2	Polr1c	NP_033111.2	ILMN_1252845	007150070	S	1218	CAATACATTTTATTAAATGTGCCACAGACACCTTTGCCTTTGTAAGGCCG	17	-	46380906-46380955	17qC	Mus musculus polymerase (RNA) I polypeptide C (Polr1c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AL024089; AA409007; 40kDa; RPA40; MGC161175; AA959927	AL024089; AA409007; 40kDa; RPA40; MGC161175; AA959927
Mus musculus	RefSeq	ILMN_213901	ILMN_321422	LOC100045585	XR_031815.1	XR_031815.1		100045585	149272295	XR_031815.1	LOC100045585		ILMN_1226049	001030164	S	2957	GGGTTCCAACCTGTTGCGGGTGCCCAGGCTGTAAGAGAATTCCAGGACCT					PREDICTED: Mus musculus similar to insulin receptor substrate 4 (LOC100045585), misc RNA.					
Mus musculus	RefSeq	ILMN_213901	ILMN_321422	LOC100045585	XR_031815.1	XR_031815.1		100045585	149272295	XR_031815.1	LOC100045585		ILMN_2659295	006280711	S	3090	CACCTCGCCAGATTTGGGTGCTGAGACCCCAAGAGAGAGCGGATTCTGAG					PREDICTED: Mus musculus similar to insulin receptor substrate 4 (LOC100045585), misc RNA.					
Mus musculus	RefSeq	ILMN_220694	ILMN_220694	SELPLG	NM_009151.2	NM_009151.2		20345	31982018	NM_009151.2	Selplg	NP_033177.2	ILMN_2820893	001070307	S	1544	CCGCCATGTCTGCTTCTCTGATTCCAGTGGCAGGTAGCTCGGCTTTCCCA	5	-	114268689-114268738	5qF	Mus musculus selectin, platelet (p-selectin) ligand (Selplg), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Transient adhesive interactions between leukocytes and endothelial cells lining blood vessels mediated primarily by selectins and which are typically the first step in cellular extravasation [goid 50901] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Selplg; Psgl1; Selpl; CD162; Psgl-1	Selplg; Psgl1; Selpl; CD162; Psgl-1
Mus musculus	MEEBO	ILMN_218842	ILMN_218842	C230024C17	scl16140.3.1_12				51705280	XM_488916	C230024C17		ILMN_2700886	003440576	S	2955	AGTCTAGAACCAACTGAAATATACTCGGCCTTCTTGTCAGGCATCAGCTG										
Mus musculus	RefSeq	ILMN_214341	ILMN_330274	1700001K23RIK	XM_001472545.1	XM_001472545.1		69319	149270829	XM_001472545.1	1700001K23Rik	XP_001472595.1	ILMN_2647023	002970735	S	179	GCTCACATTATGGTAGGAAAGCAAGCGGCACAAATGTGGAAGACCCCTGC				19qD2	PREDICTED: Mus musculus RIKEN cDNA 1700001K23 gene (1700001K23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214539	ILMN_214539	BTG4	NM_019493.3	NM_019493.3		56057	142353275	NM_019493.3	Btg4	NP_062366.2	ILMN_1248124	003130133	S	954	GTCTTCCCTAAAGCAAAAATGAGGCTAAAGCCAAGAAATGCCCCCAGTAG	9	+	50927448-50927459:50927460-50927497	9qA5.3	Mus musculus B-cell translocation gene 4 (Btg4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PC3B; C86116	PC3B; C86116
Mus musculus	RefSeq	ILMN_194569	ILMN_259734	FAM160A2	NM_199009.1	NM_199009.1		74349	39930594	NM_199009.1	Fam160a2	NP_950174.1	ILMN_1234685	000020576	S	3298	CAGGACACGGGCTCCTTTTTATGTTTGGAGGCAGTGGCAAATGGACTTTT	7	-	112527187-112527236	7qE3	Mus musculus family with sequence similarity 160, member A2 (Fam160a2), mRNA.					
Mus musculus	RefSeq	ILMN_227258	ILMN_227258	WDR18	NM_175450.3	NM_175450.3		216156	83649740	NM_175450.3	Wdr18	NP_780659.2	ILMN_2782125	002970619	S	2675	CCCAGGACTGTGTGGTGACCTACTGAAAGAGTGCCAGGTGACAGTATAGA	10	+	79372096-79372145	10qC1	Mus musculus WD repeat domain 18 (Wdr18), mRNA. XM_914259 XM_923132 XM_923137 XM_923141 XM_923147	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC106215; AW122032; AU044733; 2310012I10Rik	MGC106215; AW122032; AU044733; 2310012I10Rik
Mus musculus	RefSeq	ILMN_220452	ILMN_220452	ATF7IP	NM_019426.2	NM_019426.2		54343	34328231	NM_019426.2	Atf7ip	NP_062299.2	ILMN_2722213	005690451	S	4128	CCACCTTGTGCAAGATCTCCCGGACATGTGACTGTATACACTACGTTTGT	6	+	136555501-136555550	6qG1	Mus musculus activating transcription factor 7 interacting protein (Atf7ip), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]	2610204M12Rik; AM; Mcaf1	2610204M12Rik; AM; Mcaf1
Mus musculus	RefSeq	ILMN_248116	ILMN_248116	SYNE1	NM_001079686.1	NM_001079686.1		64009	119120864	NM_001079686.1	Syne1	NP_001073154.1	ILMN_3028463	006650392	I	5978	GTCTCCCTACGACGACAGCAAGTAAGCGAGCGCCTGAATGAGTGGGCTGT	10	+	5270594-5270643	10qA1	Mus musculus synaptic nuclear envelope 1 (Syne1), transcript variant 3, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1
Mus musculus	RefSeq	ILMN_203872	ILMN_248116	SYNE1	NM_001079686.1	NM_001079686.1		64009	119120864	NM_001079686.1	Syne1	NP_001073154.1	ILMN_1249542	001110703	S	3589	CCAGTCAGTGCTCCAAATCAGCAGTCAGGACGTGGAGAGCAAGCGCAGTG	10	+	5222760-5222809	10qA1	Mus musculus synaptic nuclear envelope 1 (Syne1), transcript variant 3, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1
Mus musculus	RefSeq	ILMN_214861	ILMN_214861	DLGAP5	NM_144553.1	NM_144553.1		218977	21362356	NM_144553.1	Dlgap5	NP_653136.1	ILMN_1244797	004900215	S	2719	CCACTATGACCCTGAAGGGAACACCAGGAGGGCTTTAAATTTAACATGAC	14	-	48007649-48007690:48007691-48007698	14qC1	Mus musculus discs, large (Drosophila) homolog-associated protein 5 (Dlgap5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]		C86398; mKIAA0008; Hurp; C77459	C86398; mKIAA0008; Hurp; C77459
Mus musculus	RefSeq	ILMN_221674	ILMN_314284	LOC100043444	XR_034814.1	XR_034814.1		100043444	149267446	XR_034814.1	LOC100043444		ILMN_2745680	005260215	S	1080	TGATTAAACTCTTTTTAACTGTTATACATTGATTATATAAAGGACAATGT	16	-	19653578-19653627	16qA3	PREDICTED: Mus musculus similar to peptidylprolyl isomerase D (LOC100043444), misc RNA.					
Mus musculus	MEEBO	ILMN_219092	ILMN_219092	5330416C01RIK	scl0403201.1_203				46430515	NM_207528	5330416C01Rik		ILMN_2704156	006330095	S	382	GGACAATCTGGAAGATGCCACCTGGTCAATCGATTCATATTCTCCACCTG										
Mus musculus	RefSeq	ILMN_217446	ILMN_217446	OTOS	NM_153114.2	NM_153114.2		260301	71896643	NM_153114.2	Otos	NP_694754.1	ILMN_2683305	006900278	S	470	GTGCAATATTTCCAGACCCAGGGCGCCTACCCACAGATCGAGGACATGGC	1	-	94540979-94541028	1qD	Mus musculus otospiralin (Otos), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]		OTOSP	OTOSP
Mus musculus	MEEBO	ILMN_192897	ILMN_192897	A230069A22RIK	scl23429.3_144				51709735	XM_489069	A230069A22Rik		ILMN_1238295	004050100	S	16	CCAGTCATCTTAGGTTCCCTTATGGCACTAGCTCATGGCCCTCAATACAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_203303	ILMN_203303	UTRN	ri|C530001M22|PX00080I12|AK049602|1255					AK049602	Utrn		ILMN_1245255	002030364	S	283	TAACGTCCAAGGCAAGCTCCCCACCACCCGAACACGCCCAGAGGAACCTT						A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	The process whose specific outcome is the progression of the adult somatic muscle over time, from its formation to the mature structure [goid 7527] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_212143	ILMN_212143	SMCP	NM_008574.3	NM_008574.3		17235	110832841	NM_008574.3	Smcp	NP_032600.2	ILMN_2623212	005340142	S	494	CTCCTTGCTGCGCTCAACCTACCTGCTGCTCTTCAGAGAACAAGACTGAG	3	-	92388133-92388182	3qF1	Mus musculus sperm mitochondria-associated cysteine-rich protein (Smcp), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence TAS]	The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IDA]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IMP]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IGI]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IGI]		Mcsp; Mcs	Mcsp; Mcs
Mus musculus	RefSeq	ILMN_192619	ILMN_233717	CCDC112	XM_140320.7	XM_140320.7		240261	149269826	XM_140320.7	Ccdc112	XP_140320.7	ILMN_1248354	002450450	S	1364	AGGCAGAGAAGGCAGAGAAGAGGAAGACTGCTGCGGATGAGCTTGCCAGG	18	-	46447015-46447064	18qC	PREDICTED: Mus musculus coiled-coil domain containing 112 (Ccdc112), mRNA.					
Mus musculus	RefSeq	ILMN_189312	ILMN_189312	MORC2A	NM_198162.1	NM_198162.1		74522	37718975	NM_198162.1	Morc2a	NP_937805.1	ILMN_1225995	002030162	S	4335	GCTGCCCCCATCCAACTTTCTGTTGACCCTATCCAGGCAGAGTATGATCC	11	+	3590293-3590342	11qA1	Mus musculus microrchidia 2A (Morc2a), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	8430403M08Rik; RP23-309E11.5; Zcwcc1	8430403M08Rik; RP23-309E11.5; Zcwcc1
Mus musculus	RefSeq	ILMN_208627	ILMN_208627	PTPRN2	NM_011215.1	NM_011215.1		19276	33859597	NM_011215.1	Ptprn2	NP_035345.1	ILMN_1227939	000460431	S	2905	TTGATATCGCAGCGACCCTGGAGCACTTGAGGGACCAGAGACCAGGCATG	12	+	118508062-118508111	12qF2	Mus musculus protein tyrosine phosphatase, receptor type, N polypeptide 2 (Ptprn2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	4930425H11Rik; PTP-NP; IA-2beta; mKIAA0387; phogrin; KIAA0387	4930425H11Rik; PTP-NP; IA-2beta; mKIAA0387; phogrin; KIAA0387
Mus musculus	RefSeq	ILMN_212603	ILMN_212603	CSF1	NM_007778.3	NM_007778.3		12977	144227199	NM_007778.3	Csf1	NP_031804.2	ILMN_1254561	003440021	S	4015	CTGAGAAAGCTCAGAGGGAGCACTGCCTCACAAACTGTGAGACTGCGTTT	3	-	107544077-107544126	3qF2.3	Mus musculus colony stimulating factor 1 (macrophage) (Csf1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IGI]; Any process that activates or increases the rate or extent of cell adhesion to an extracellular matrix [goid 1954] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of monocyte differentiation [goid 45657] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42488] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISO]	M-CSF; C87615; Csfm; CSF-1; op	M-CSF; C87615; Csfm; CSF-1; op
Mus musculus	Riken	ILMN_207412	ILMN_207412	G630097J24RIK	ri|G630097J24|PL00014M14|AK090391|4023					AK090391	G630097J24Rik		ILMN_1222859	006100725	S	3953	CCTCTTCTGGCTTCCGTGGGCACCTGCACTCATGCACAGACACACACACA										
Mus musculus	RefSeq	ILMN_200906	ILMN_200906	LOC384646	XM_357763.1	XM_357763.1			38086953	XM_357763.1	LOC384646		ILMN_2540421	004280195	S	213	TGTCCAAGGGATCGCTGATGATTACGATAAAAAGAAACTAGTGAAGGCGA										
Mus musculus	RefSeq	ILMN_216845	ILMN_216845	ALKBH5	NM_172943.3	NM_172943.3		268420	141803054	NM_172943.3	Alkbh5	NP_766531.2	ILMN_1255259	005820324	S	2726	GCCTATTTAGATCCTGGAAGGTGGGGTTCATTAGGATTGACTTTGGCAGC	11	+	60369010-60369059	11qB2	Mus musculus alkB, alkylation repair homolog 5 (E. coli) (Alkbh5), mRNA.			Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	E130207K11; Ofoxd; AW050020; Abh5	E130207K11; Ofoxd; AW050020; Abh5
Mus musculus	RefSeq	ILMN_197468	ILMN_197468	LOC218997	XM_139014.2	XM_139014.2			38076108	XM_139014.2	LOC218997		ILMN_1253358	000020050	S	118	CCCGACGAGACCAATGAAATCATCAATGTCAACTCCGGGAAGAGGAACGG										
Mus musculus	RefSeq	ILMN_200152	ILMN_200152	LOC385813	XM_358954.1	XM_358954.1			38080716	XM_358954.1	LOC385813		ILMN_1228075	006960053	S	179	TTAGCCAAGAAAACAGCCCACAAGCCAATCTGTGGTCTAAGGGGCCATGG										
Mus musculus	RefSeq	ILMN_212536	ILMN_254754	LOC677369	XR_005046.1	XR_005046.1		677369	94377878	XR_005046.1	LOC677369		ILMN_2627546	005310162	S	4549	AGCCCTGTTCTTAGGACTTCTCAAGAAAAAGTGGTTTTTGTATTTCCAGA					PREDICTED: Mus musculus similar to Alpha-2-macroglobulin (LOC677369), misc RNA.					
Mus musculus	RefSeq	ILMN_222955	ILMN_222955	THOC3	NM_028597.2	NM_028597.2		73666	142384623	NM_028597.2	Thoc3	NP_082873.1	ILMN_2757197	001770471	S	1104	GCCGGGCGGACTATTTGGGCTACCTAATGACTGTACCTTTCAGGGAGAGG	13	-	54561349-54561398	13qB1	Mus musculus THO complex 3 (Thoc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	2410044K02Rik; AL033344	2410044K02Rik; AL033344
Mus musculus	RefSeq	ILMN_208735	ILMN_208735	PACSIN3	NM_028733.2	NM_028733.2		80708	141803499	NM_028733.2	Pacsin3	NP_083009.1	ILMN_2589015	003940053	S	1418	GTCCCCGGAAAGTTGCCACTGGGGTGAGGGTACGGGCGCTTTATGACTAT	2	+	91103957-91104006	2qE1	Mus musculus protein kinase C and casein kinase substrate in neurons 3 (Pacsin3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AW413130; 6330413E15Rik; 4921507A02Rik	AW413130; 6330413E15Rik; 4921507A02Rik
Mus musculus	RefSeq	ILMN_191119	ILMN_256349	RAB3GAP2	XM_980542.1	XM_980542.1		98732	94364679	XM_980542.1	Rab3gap2	XP_985636.1	ILMN_1217055	001170424	S	4140	CTCGTGCATAAAGTGATGGAGCTCCTGCCAGAGAAGCACGGGCAGTACAG					PREDICTED: Mus musculus RAB3 GTPase activating protein subunit 2, transcript variant 4 (Rab3gap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197051	ILMN_256349	RAB3GAP2	XM_980542.1	XM_980542.1		98732	94364679	XM_980542.1	Rab3gap2	XP_985636.1	ILMN_1227026	003310180	S	432	AGCGGCTCCGTAAGTGCAGAGGAAGGGGAGTATGTAACCAGTGCCCTGTG					PREDICTED: Mus musculus RAB3 GTPase activating protein subunit 2, transcript variant 4 (Rab3gap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215094	ILMN_314790	LOC100045963	XM_001475257.1	XM_001475257.1		100045963	149261302	XM_001475257.1	LOC100045963	XP_001475307.1	ILMN_2655437	006900408	S	810	GTGTAAAGAAGACTATGCACTGGGTGAGAGTGTGCGGCAGTTGCCCTGCA					PREDICTED: Mus musculus similar to Ring finger protein 126 (LOC100045963), mRNA.					
Mus musculus	RefSeq	ILMN_212888	ILMN_212888	GPM6B	NM_023122.2	NM_023122.2		14758	118130376	NM_023122.2	Gpm6b	NP_075611.1	ILMN_2631345	006130168	S	2673	TTTTGTAACCTAACAGTGAATCAATATTTTCTATCAGTGCCAAGGGCTTC	X	+	162826735-162826784	XqF5	Mus musculus glycoprotein m6b (Gpm6b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI593561; M6B; Gpm6	AI593561; M6B; Gpm6
Mus musculus	RefSeq	ILMN_253609	ILMN_253609	AI595366	NM_001033042.3	NM_001033042.3		432779	146198870	NM_001033042.3	AI595366	NP_001028214.1	ILMN_3161863	006400593	S	2576	CTATAAGGCACACGAATCACTGCTCCTCCTCAGAATGGCTGAGGCCTGGC				13qC1	Mus musculus expressed sequence AI595366 (AI595366), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194401	ILMN_261943	TMED8	NM_001033475.3	NM_001033475.3		382620	146198784	NM_001033475.3	Tmed8	NP_001028647.1	ILMN_1234054	003140241	S	6702	AAATGTTTAAGCAGCTGACAACCATGAGACATGCTTTCCTTACTGTTTCG				12qD2	Mus musculus transmembrane emp24 domain containing 8 (Tmed8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		6430595O10Rik; AI447224; Gm1184	6430595O10Rik; AI447224; Gm1184
Mus musculus	RefSeq	ILMN_198299	ILMN_198299	LOC210196	XM_145157.2	XM_145157.2			38083723	XM_145157.2	LOC210196		ILMN_1249482	001050100	S	1741	GAACGTGGGTCACTGAAAACAGCTACTACACCTCAGTCCCTGCTTTGGGG										
Mus musculus	Riken	ILMN_201970	ILMN_201970	FAAH	ri|1300013E02|R000011M16|AK004985|2803					AK004985	Faah		ILMN_1233816	003460563	S	2035	GCTGATGGCCATGGCTGTGAAGGCTGACGACCTTCCTCTCTCTCTGCTCA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200437	ILMN_200437	LOC384288	XM_357545.1	XM_357545.1			38081924	XM_357545.1	LOC384288		ILMN_2538758	003940114	S	461	AGAAAAGGCAAGCCCCGAGGCCCAGTCTCGCTTCCTACCAAAGTGGTCAC										
Mus musculus	RefSeq	ILMN_187256	ILMN_232172	LIN9	NM_175186.3	NM_175186.3		72568	142347560	NM_175186.3	Lin9	NP_780395.1	ILMN_2610516	006020372	S	1521	TAAGTTAAACCAGTATCTTTAAAAGGTTTTTTATCAGGACTGCAATTTGC	1	+	182611618-182611620:182611621-182611667	1qH4	Mus musculus lin-9 homolog (C. elegans) (Lin9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		TGS; AA545216; TGS1; AA537062; 2700022J23Rik; Bara	TGS; AA545216; TGS1; AA537062; 2700022J23Rik; Bara
Mus musculus	MEEBO	ILMN_222473	ILMN_222473	PPID	scl067738.10_4	NM_026352.2			31981006	NM_026352.2	Ppid		ILMN_2750042	002230221	S	1275	TGTGTTTCCCTTGATCTCTGTCATTGTTTACATAGCAGTGCTGACACAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198346	ILMN_242017	LOC225681	XR_002111.1	XR_002111.1		225681	94404515	XR_002111.1	LOC225681		ILMN_1228803	002370500	S	483	CTGGCCCCCATGAGAAGATATGGCATGATGGACATGGAACTGCCCAGAGC	18	+	69382160-69382209	18qE2	PREDICTED: Mus musculus similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (LOC225681), mRNA.					
Mus musculus	RefSeq	ILMN_200215	ILMN_200215	LOC385962	XM_359015.1	XM_359015.1			38080967	XM_359015.1	LOC385962		ILMN_1231561	002140050	S	552	TGCCATCTCTGTGAGGATGCTTTCAGGCCACCAGCAGCCCTCTCTTGTTC										
Mus musculus	RefSeq	ILMN_212741	ILMN_212741	BCL6B	NM_007528.2	NM_007528.2		12029	133891681	NM_007528.2	Bcl6b	NP_031554.1	ILMN_2629764	003120195	S	3010	CTGCTCCTGCTGCCCTGGGACCTATTTGATTATAGTACTTGGGTAAACGG	11	-	70039367-70039416	11qB3	Mus musculus B-cell CLL/lymphoma 6, member B (Bcl6b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Bazf	Bazf
Mus musculus	RefSeq	ILMN_199426	ILMN_199426	OLFR120	NM_146631.1	NM_146631.1		258624	33238907	NM_146631.1	Olfr120	NP_666842.1	ILMN_2535171	006860576	S	760	TCCACCTGTTCCTCCCATCTACTTGTAGTCACATTGTTCTATGGCTCAGC	17	+	37863703-37863752	17qB1	Mus musculus olfactory receptor 120 (Olfr120), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR263-3	MOR263-3
Mus musculus	RefSeq	ILMN_199426	ILMN_199426	OLFR120	NM_146631.1	NM_146631.1		258624	33238907	NM_146631.1	Olfr120	NP_666842.1	ILMN_1242335	004280435	S	802	GGCTCAGCATCTATTACCTACTTGAGGCCCAAGTCTAGCCACTCACCAGG	17	+	37863745-37863794	17qB1	Mus musculus olfactory receptor 120 (Olfr120), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR263-3	MOR263-3
Mus musculus	RefSeq	ILMN_223409	ILMN_223409	SARM1	NM_172795.2	NM_172795.2		237868	40254246	NM_172795.2	Sarm1	NP_766383.2	ILMN_2763689	003130392	S	3645	GGCATATAGAATGTCCCATGTCCCTCCCTCCACTGGACAAGAAAGGCAAG	11	-	78300736-78300785	11qB5	Mus musculus sterile alpha and HEAT/Armadillo motif containing 1 (Sarm1), mRNA.	Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]; Loosely bound to one surface of the mitochondrial outer membrane, but not integrated into the hydrophobic region [goid 31315] [evidence IDA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sarm1; C78606	Sarm1; C78606
Mus musculus	RefSeq	ILMN_244240	ILMN_244240	C330023M02RIK	NM_172722.2	NM_172722.2		231713	55742802	NM_172722.2	C330023M02Rik	NP_766310.2	ILMN_2833248	002360709	S	2772	TGCACTTAGACTTGAGGAGCTCACGTTAGAGGAAACTTCTATCTCTACGG	5	+	121700051-121700098:121700445-121700446	5qF	Mus musculus RIKEN cDNA C330023M02 gene (C330023M02Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	A630046C11; AI450868; 4833422K13Rik	A630046C11; AI450868; 4833422K13Rik
Mus musculus	RefSeq	ILMN_244240	ILMN_244240	C330023M02RIK	NM_172722.2	NM_172722.2		231713	55742802	NM_172722.2	C330023M02Rik	NP_766310.2	ILMN_2833243	006960170	S	2973	CCACAGCAGAAGATGACACACCACCTTCCCCAGCAAAAACAACATCTGGC	5	+	121700598-121700647	5qF	Mus musculus RIKEN cDNA C330023M02 gene (C330023M02Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	A630046C11; AI450868; 4833422K13Rik	A630046C11; AI450868; 4833422K13Rik
Mus musculus	RefSeq	ILMN_222145	ILMN_241896	DSCAML1	NM_001081270.1	NM_001081270.1		114873	124486900	NM_001081270.1	Dscaml1	NP_001074739.1	ILMN_1216194	005690025	S	2687	CCATTGCTACCAAGGACAATGGCGATGAAGTGGTCTCCACGCTTAAGCTC	9	+	45510045-45510091:45510407-45510409	9qA5.2	Mus musculus Down syndrome cell adhesion molecule-like 1 (Dscaml1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence ISA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISA]		mKIAA1132; 4930435C18Rik; 4921507G06Rik; BB239540	mKIAA1132; 4930435C18Rik; 4921507G06Rik; BB239540
Mus musculus	RefSeq	ILMN_218225	ILMN_218225	PACRGL	NM_025755.3	NM_025755.3		66768	118130263	NM_025755.3	Pacrgl	NP_080031.1	ILMN_1236980	002030673	S	1363	TTACTATTTGTTTGTTGTTTATTACAACTTTTTAAACTACCTAAACTTTA	5	+	48779894-48779943	5qB3	Mus musculus PARK2 co-regulated-like (Pacrgl), mRNA.					
Mus musculus	MEEBO	ILMN_222070	ILMN_222070	LRRC8	scl21094.18.34_0	NM_177725.2			31343201	NM_177725.2	Lrrc8		ILMN_2744193	000630309	S	3865	ACCATTCCGACCACTCCCGCCAGGCCTACACTGTCCACCTCATGGAGGCT										
Mus musculus	RefSeq	ILMN_199816	ILMN_199816	LOC383948	XM_357343.1	XM_357343.1			38077600	XM_357343.1	LOC383948		ILMN_2536587	002060220	S	651	AAGGATCTTCACTACTTTGCTGGCTGGGGCCCTGGCGTCTTCAGTGGCTC										
Mus musculus	RefSeq	ILMN_221165	ILMN_258051	BFSP2	NM_001002896.2	NM_001002896.2		107993	118131084	NM_001002896.2	Bfsp2	NP_001002896.1	ILMN_2731774	004860427	S	1282	GCGTGCAAGAGCCAGCTACAGAAGGATGTGGCATCCTACCACGCCCTGCT	9	-	103328904-103328953	9qF1	Mus musculus beaded filament structural protein 2, phakinin (Bfsp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	5830418P13Rik; CP49; AI448593	5830418P13Rik; CP49; AI448593
Mus musculus	MEEBO	ILMN_187021	ILMN_187021	3300002A11RIK	scl42880.5.1_63						3300002A11Rik		ILMN_2440486	001740014	S	17	CCAATCTGTCTGCTGCTGAGTGATCAGACATCATCGGATTCCCCCCACTG										
Mus musculus	RefSeq	ILMN_232752	ILMN_232752	SLC9A10	NM_198106.1	NM_198106.1		208169	37674258	NM_198106.1	Slc9a10	NP_932774.1	ILMN_2867343	002510215	S	3438	GGCGCCTTTCCTAATTCCTGTGACGTGCCATCAGATACAAGGCATGGAAG	16	+	45519185-45519215:45521206-45521224	16qB5	Mus musculus solute carrier family 9, isoform 10 (Slc9a10), mRNA.	A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	spermNHE; Gm610	spermNHE; Gm610
Mus musculus	MEEBO	ILMN_220036	ILMN_220036	C130007D14	scl55086.1.1_67	NM_177914.1			29244563	NM_177914.1	C130007D14		ILMN_2716799	004390338	S	2037	GATCAGACCTCATTCACACTTTCCCATTGGATACGGGACCTTGATTGGCT										
Mus musculus	MEEBO	ILMN_211760	ILMN_211760	EIF2B3	scl25057.15.1_6	XM_131572.4			38078669	XM_131572.4	Eif2b3		ILMN_2619270	006760445	S	1417	CTGAACAAGCCCGACCCCTTCCTTTGGGCCTCAAACTACAGATGCTGCCT						A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]		
Mus musculus	Riken	ILMN_201610	ILMN_201610	0610030G03RIK	ri|0610030G03|R000004K23|AK002703|711					AK002703	0610030G03Rik		ILMN_1253221	001340356	S	510	TGGAGCCAGGGAGGGAGGCCATCTTAACCCAGCAGCGTCTGACTTCTAAG										
Mus musculus	Riken	ILMN_206619	ILMN_206619	E330033J05RIK	ri|E330033J05|PX00212L22|AK087868|1169					AK087868	E330033J05Rik		ILMN_1214572	002710554	S	879	ACGTGGCCTTTCCCGGTCTTTGCCCTGTTGGGAAGTGTAAATCGAAGCCC										
Mus musculus	RefSeq	ILMN_216432	ILMN_216432	CCL27	NM_011336.1	NM_011336.1		20301	6755427	NM_011336.1	Ccl27	NP_035466.1	ILMN_1216183	005340358	S	178	CACATGGAACTGCAGGAGGCCGATGGGGACTGTCACCTCCAGGCTGTCGT	4	-	41716717-41716766	4qA5	Mus musculus chemokine (C-C motif) ligand 27 (Ccl27), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	mILC; ILC; PESKY; Ccl27b; Scya27b; Scya27; CTACK; MGC130150; ESkine; CTAK; ALP; Scya27a; Ccl27a; AW558992	mILC; ILC; PESKY; Ccl27b; Scya27b; Scya27; CTACK; MGC130150; ESkine; CTAK; ALP; Scya27a; Ccl27a; AW558992
Mus musculus	RefSeq	ILMN_223702	ILMN_223702	PDYN	NM_018863.2	NM_018863.2		18610	24476002	NM_018863.2	Pdyn	NP_061351.1	ILMN_2767871	001260300	S	1650	GACGCCATCCTTCTGAAGGCTGAAGTGATAAGGGGGGAGCAAAGCAAACT	2	-	129512987-129513036	2qF1	Mus musculus prodynorphin (Pdyn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]	Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect [goid 1515] [evidence IEA]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence ISS]	Dyn	Dyn
Mus musculus	RefSeq	ILMN_223702	ILMN_223702	PDYN	NM_018863.2	NM_018863.2		18610	24476002	NM_018863.2	Pdyn	NP_061351.1	ILMN_2783873	003610332	S	2309	CTTGGGACATGTGATCCTTAATAGGTCTGTGTAGTTTCCTGCTTCTCTGG	2	-	129512328-129512377	2qF1	Mus musculus prodynorphin (Pdyn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]	Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect [goid 1515] [evidence IEA]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence ISS]	Dyn	Dyn
Mus musculus	RefSeq	ILMN_198666	ILMN_198666	LOC245115	XM_142530.3	XM_142530.3			38086735	XM_142530.3	LOC245115		ILMN_1251417	001980327	S	3400	GGCCCTGTAGAACCTTTGCCACCTCTCCAGGGAACTCTAGGATATTCATC										
Mus musculus	RefSeq	ILMN_256496	ILMN_256496	VCAN	NM_001081249.1	NM_001081249.1		13003	124486954	NM_001081249.1	Vcan	NP_001074718.1	ILMN_2865704	000360747	S	537	CCTGTTAAAGGCTCTCTGTCTGGAAAAGTGGTCCTACCTTGTCATTTTTC	13	-	89865198-89865247	13qC3	Mus musculus versican (Vcan), transcript variant 1, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	9430051N09; PG-M(V1); Cspg2; PG-M; PG-M(V0); NG2; DPEAAE; hdf; 5430420N07Rik	9430051N09; PG-M(V1); Cspg2; PG-M; PG-M(V0); NG2; DPEAAE; hdf; 5430420N07Rik
Mus musculus	RefSeq	ILMN_215083	ILMN_256496	VCAN	NM_001081249.1	NM_001081249.1		13003	124486954	NM_001081249.1	Vcan	NP_001074718.1	ILMN_1247540	006380632	S	9305	GCCCATCCAACAGGAGCCTGAGAGGCCAACCTTTCCTTCCTTGGAAATTA	13	-	89828120-89828169	13qC3	Mus musculus versican (Vcan), transcript variant 1, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	9430051N09; PG-M(V1); Cspg2; PG-M; PG-M(V0); NG2; DPEAAE; hdf; 5430420N07Rik	9430051N09; PG-M(V1); Cspg2; PG-M; PG-M(V0); NG2; DPEAAE; hdf; 5430420N07Rik
Mus musculus	RefSeq	ILMN_215083	ILMN_256496	VCAN	NM_001081249.1	NM_001081249.1		13003	124486954	NM_001081249.1	Vcan	NP_001074718.1	ILMN_2669627	002570148	S	10578	CCTATCACCTCAAGAAGAATTAGAAGTTGGTTTGGATTATGGGACTGCCG	13	-	89796719-89796768	13qC3	Mus musculus versican (Vcan), transcript variant 1, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	9430051N09; PG-M(V1); Cspg2; PG-M; PG-M(V0); NG2; DPEAAE; hdf; 5430420N07Rik	9430051N09; PG-M(V1); Cspg2; PG-M; PG-M(V0); NG2; DPEAAE; hdf; 5430420N07Rik
Mus musculus	RefSeq	ILMN_215083	ILMN_256496	VCAN	NM_001081249.1	NM_001081249.1		13003	124486954	NM_001081249.1	Vcan	NP_001074718.1	ILMN_2655336	003460243	S	1433	GAACCAGACATGCTTCCCTCTCCCTGATAGCAGATTTGATGCCTACTGCT	13	-	89851815-89851864	13qC3	Mus musculus versican (Vcan), transcript variant 1, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	9430051N09; PG-M(V1); Cspg2; PG-M; PG-M(V0); NG2; DPEAAE; hdf; 5430420N07Rik	9430051N09; PG-M(V1); Cspg2; PG-M; PG-M(V0); NG2; DPEAAE; hdf; 5430420N07Rik
Mus musculus	RefSeq	ILMN_221198	ILMN_221198	PIK3R2	NM_008841.1	NM_008841.1		18709	6679320	NM_008841.1	Pik3r2	NP_032867.1	ILMN_2916883	001940039	S	2865	CTTCCCCTCTTAAGGTCGAAGTGAAACCAGTCACAGGGGGTTACCCCGCA	8	-	73292293-73292342	8qB3.3	Mus musculus phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta) (Pik3r2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence NAS]	Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [evidence IMP]	Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IMP]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221198	ILMN_221198	PIK3R2	NM_008841.1	NM_008841.1		18709	6679320	NM_008841.1	Pik3r2	NP_032867.1	ILMN_2732317	002900497	S	2532	ACTCGTGCAGCACAATGACGCACTTACCGTCACCCTCGCACACCCTGTGC	8	-	73292626-73292675	8qB3.3	Mus musculus phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta) (Pik3r2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence NAS]	Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [evidence IMP]	Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IMP]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_193768	ILMN_193768	UNC5CL	NM_152823.3	NM_152823.3		76589	65301485	NM_152823.3	Unc5cl	NP_690036.3	ILMN_2500245	004280468	S	1616	TGCATGGAGGCACCTGGGAGAACCATGGCCTAGAGCTGGATGAGAAACTC	17	+	48606811-48606860	17qC	Mus musculus unc-5 homolog C (C. elegans)-like (Unc5cl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2510009H09Rik; BB155270	2510009H09Rik; BB155270
Mus musculus	RefSeq	ILMN_210832	ILMN_210832	TMEM144	NM_027495.4	NM_027495.4		70652	146141203	NM_027495.4	Tmem144	NP_081771.2	ILMN_2609654	002490291	S	2212	CTGGAAGTGTTTCTTTTGACCCTATTTTAACTGATTTCCAGGAGACAAAA				3qE3	Mus musculus transmembrane protein 144 (Tmem144), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5730537D05Rik; 1110057I03Rik	5730537D05Rik; 1110057I03Rik
Mus musculus	RefSeq	ILMN_192275	ILMN_192275	VEGFC	NM_009506.2	NM_009506.2		22341	119672918	NM_009506.2	Vegfc	NP_033532.1	ILMN_2486573	003170192	S	1434	CCTTTAGTGAAGAAGTATGCCGCTGTGTCCCATCGTATTGGAAAAGGCCA	8	+	55271361-55271410	8qB1.3	Mus musculus vascular endothelial growth factor C (Vegfc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IDA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence ISO]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with vascular endothelial growth factor receptor 3 [goid 43185] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	VEGF-C; AW228853	VEGF-C; AW228853
Mus musculus	RefSeq	ILMN_220971	ILMN_220971	CD46	NM_010778.3	NM_010778.3		17221	142367650	NM_010778.3	Cd46	NP_034908.1	ILMN_2729316	006520255	S	1163	ACTGGATCTTCAAGTCTGGCAAACGCAAAATTATATATTTGCAGGAGCTT	1	-	196904383-196904424:196906121-196906128	1qH6	Mus musculus CD46 antigen, complement regulatory protein (Cd46), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]		Mcp	Mcp
Mus musculus	RefSeq	ILMN_199562	ILMN_199562	LOC382732	XM_356645.1	XM_356645.1			38074359	XM_356645.1	LOC382732		ILMN_2535669	001570673	S	192	CAAGCCGGACCTCCCCAATGCCATGAACCCAGACAAAATCACAGATGCGT										
Mus musculus	RefSeq	ILMN_190230	ILMN_237858	JMJD2A	NM_172382.1	NM_172382.1		230674	33859780	NM_172382.1	Jmjd2a	NP_759014.1	ILMN_1229847	002710047	S	2855	GGTCAGACTCACCACCGAGACCTTCTACGAAGTCAACTTTGACGACGGCT	4	-	117815022-117815071	4qD2.1	Mus musculus jumonji domain containing 2A (Jmjd2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Jmjd2; mKIAA0677; MGC28562; D4Ertd222e	Jmjd2; mKIAA0677; MGC28562; D4Ertd222e
Mus musculus	RefSeq	ILMN_190230	ILMN_237858	JMJD2A	NM_172382.1	NM_172382.1		230674	33859780	NM_172382.1	Jmjd2a	NP_759014.1	ILMN_1258791	001850064	S	2937	GTGGTAATGTCTGAAAGCGGCTTCTGGCAGCACTTTGGGTCTGGGACATC	4	-	117814940-117814989	4qD2.1	Mus musculus jumonji domain containing 2A (Jmjd2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Jmjd2; mKIAA0677; MGC28562; D4Ertd222e	Jmjd2; mKIAA0677; MGC28562; D4Ertd222e
Mus musculus	RefSeq	ILMN_199035	ILMN_199035	LOC327767	XM_284874.2	XM_284874.2			38090532	XM_284874.2	LOC327767		ILMN_2533815	005340670	S	481	GTGACAGCTGACAGTAGACCCCAGGTACAGAGAGCACACTGTGAGGCAGA										
Mus musculus	RefSeq	ILMN_197415	ILMN_315945	LOC100048699	XM_001480866.1	XM_001480866.1		100048699	149249727	XM_001480866.1	LOC100048699	XP_001480916.1	ILMN_1225169	002120575	S	323	ACACTGTGCTCTGGGGAGAAGGGCAGATTCGCTTCGTCTGCCGTGGTTCC					PREDICTED: Mus musculus hypothetical protein LOC100048699 (LOC100048699), mRNA.					
Mus musculus	Riken	ILMN_204060	ILMN_204060	A630059M09RIK	ri|A630059M09|PX00146B17|AK042117|1166					AK042117	A630059M09Rik		ILMN_1232847	003360273	S	799	ACAAGGAGAGGAGTGGTGAGCTGGAAAACTGTGTCCTCTTGCTCTGCAGG										
Mus musculus	RefSeq	ILMN_199084	ILMN_199084	LOC327743	XM_282903.2	XM_282903.2			38090842	XM_282903.2	LOC327743		ILMN_1250911	003890471	S	653	GCAGCTAAAGGAAGAAGGAAGACTGATCCCCCAAACTGTGGCCGGGGAAC										
Mus musculus	RefSeq	ILMN_210673	ILMN_238277	4921511H13RIK	XM_904396.3	XM_904396.3		207932	149268227	XM_904396.3	4921511H13Rik	XP_909489.3	ILMN_1235119	001230097	S	866	GGCTGGCCTACATCCAGTTTGCCCTTTCCTTCCTAATTGCGGGTGATGAC				16qC3.3	PREDICTED: Mus musculus RIKEN cDNA 4921511H13 gene (4921511H13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_193883	ILMN_238277	4921511H13RIK	XM_904396.3	XM_904396.3		207932	149268227	XM_904396.3	4921511H13Rik	XP_909489.3	ILMN_2501324	002060402	S	7150	GGGTTCCGAGACAGACATAAACTGATACATGCAACTATTTTCCAGCAAGA				16qC3.3	PREDICTED: Mus musculus RIKEN cDNA 4921511H13 gene (4921511H13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_232321	ILMN_232321	SHPRH	NM_001077707.1	NM_001077707.1		268281	118150661	NM_001077707.1	Shprh	NP_001071175.1	ILMN_3093817	003840678	A	4247	AGCGACTAAGAGTGCGCCATCCCAAAGAGCCAAAGCCAAACCCACCCGTC	10	+	10909499-10909548	10qA1	Mus musculus SNF2 histone linker PHD RING helicase (Shprh), transcript variant 1, mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AA450458; BC006883; AU024614; E130018M05; D230017O13Rik; 2610103K11Rik	AA450458; BC006883; AU024614; E130018M05; D230017O13Rik; 2610103K11Rik
Mus musculus	RefSeq	ILMN_232321	ILMN_232321	SHPRH	NM_001077707.1	NM_001077707.1		268281	118150661	NM_001077707.1	Shprh	NP_001071175.1	ILMN_3021465	003060682	I	6338	GTTCCTGGGTCTCCTTTATCCCGTGAGCTCTGGTGCTTAAGCTAAGGTGC	10	+	10934460-10934509	10qA1	Mus musculus SNF2 histone linker PHD RING helicase (Shprh), transcript variant 1, mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AA450458; BC006883; AU024614; E130018M05; D230017O13Rik; 2610103K11Rik	AA450458; BC006883; AU024614; E130018M05; D230017O13Rik; 2610103K11Rik
Mus musculus	RefSeq	ILMN_221960	ILMN_221960	TIGD3	NM_198634.1	NM_198634.1		332359	38348509	NM_198634.1	Tigd3	NP_941036.1	ILMN_1254037	002060228	S	1732	CTACGGATGGGGCCTCAAGAGTGGAAAGCTGGGCTGTGTAGCTTCTAGGC	19	-	5891471-5891520	19qA	Mus musculus tigger transposable element derived 3 (Tigd3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC60957; MGC67569	MGC60957; MGC67569
Mus musculus	RefSeq	ILMN_196834	ILMN_221960	TIGD3	NM_198634.1	NM_198634.1		332359	38348509	NM_198634.1	Tigd3	NP_941036.1	ILMN_2525968	001990075	S	393	GAGGCTCTACTGTGCTGGTACCACATTGCCCGAGCCAAGGCCTGGGATGT	19	-	5892810-5892859	19qA	Mus musculus tigger transposable element derived 3 (Tigd3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC60957; MGC67569	MGC60957; MGC67569
Mus musculus	Riken	ILMN_203357	ILMN_203357	E130116C07RIK	ri|E130116C07|PX00092O21|AK053631|2699					AK053631	E130116C07Rik		ILMN_1239696	005490239	S	2380	CTGGGTCTCATAGCTCTATGCTCCTAGGCCCAGCTTCGAGCATTCTTCTT										
Mus musculus	RefSeq	ILMN_217818	ILMN_217818	DNAJA2	NM_019794.3	NM_019794.3		56445	146134939	NM_019794.3	Dnaja2	NP_062768.1	ILMN_2720580	004060026	S	2751	GTATTTGAGGTAACTTCCCCACAACACTTTAAGCCTAAGCAATGCAGTGA				8qC3	Mus musculus DnaJ (Hsp40) homolog, subfamily A, member 2 (Dnaja2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	DNAJ; Dnaj3; 1500017M13Rik; DNJ3; HIRIP4; 2010206B19Rik; PRO3015; mDj3	DNAJ; Dnaj3; 1500017M13Rik; DNJ3; HIRIP4; 2010206B19Rik; PRO3015; mDj3
Mus musculus	RefSeq	ILMN_217818	ILMN_217818	DNAJA2	NM_019794.3	NM_019794.3		56445	146134939	NM_019794.3	Dnaja2	NP_062768.1	ILMN_2687961	001690709	S	1650	AATAGAATAAAGAATTCATAGCCTGTATCTATCATTTAGATGCATGGAAA				8qC3	Mus musculus DnaJ (Hsp40) homolog, subfamily A, member 2 (Dnaja2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	DNAJ; Dnaj3; 1500017M13Rik; DNJ3; HIRIP4; 2010206B19Rik; PRO3015; mDj3	DNAJ; Dnaj3; 1500017M13Rik; DNJ3; HIRIP4; 2010206B19Rik; PRO3015; mDj3
Mus musculus	RefSeq	ILMN_191525	ILMN_260622	EP300	NM_177821.6	NM_177821.6		328572	123173876	NM_177821.6	Ep300	NP_808489.4	ILMN_2625134	001990193	S	2224	CCGACGGATGGAAAATCTTGTTGCATATGCTCGTAAAGTGGAAGGGGACA	15	+	81450475-81450524	15qE1	Mus musculus E1A binding protein p300 (Ep300), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]	Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	A730011L11; p300; A430090G16	A730011L11; p300; A430090G16
Mus musculus	RefSeq	ILMN_260622	ILMN_260622	EP300	NM_177821.6	NM_177821.6		328572	123173876	NM_177821.6	Ep300	NP_808489.4	ILMN_2800358	005290240	S	7919	GAGGCAACTGAGGTCTGAAGCCAACCATATGCTCCTGCCTTGCCGATAGG	15	+	81481677-81481726	15qE1	Mus musculus E1A binding protein p300 (Ep300), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]	Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	A730011L11; p300; A430090G16	A730011L11; p300; A430090G16
Mus musculus	RefSeq	ILMN_212307	ILMN_212307	IL2RG	NM_013563.3	NM_013563.3		16186	118129799	NM_013563.3	Il2rg	NP_038591.1	ILMN_2886646	000270176	S	1370	TCCACTTTCTTTGAAGAGAGTCTTACCCTGTAGCCCAGGGTGGCTGGGAG	X	-	98459918-98459967	XqD	Mus musculus interleukin 2 receptor, gamma chain (Il2rg), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of T cell differentiation in the thymus [goid 33089] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells [goid 32831] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with interleukin-2 [goid 19976] [evidence IPI]	CD132; [g]c; gamma(c)	CD132; [g]c; gamma(c)
Mus musculus	RefSeq	ILMN_230372	ILMN_230372	CSTF3	NM_177253.1	NM_177253.1		228410	82617609	NM_177253.1	Cstf3	NP_796227.1	ILMN_3145415	004590497	A	286	CACGGAAGACTTACGAACGCCTTGTTGCCCAGTTCCCCAGTTCTGGCAGA	2	+	104409950-104409999	2qE2	Mus musculus cleavage stimulation factor, 3' pre-RNA, subunit 3 (Cstf3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC6373; 4732468G05Rik; C79532	MGC6373; 4732468G05Rik; C79532
Mus musculus	RefSeq	ILMN_196590	ILMN_310691	LOC100044289	XM_001471604.1	XM_001471604.1		100044289	149258598	XM_001471604.1	LOC100044289	XP_001471654.1	ILMN_1231270	006900341	S	386	CTGGGTCAAGATAACCATGTTCTTTGGAACCTCACTATCTGTCAAGACCC					PREDICTED: Mus musculus hypothetical protein LOC100044289 (LOC100044289), mRNA.					
Mus musculus	RefSeq	ILMN_210659	ILMN_210659	BAG4	NM_026121.3	NM_026121.3		67384	116686110	NM_026121.3	Bag4	NP_080397.1	ILMN_2607892	005550538	S	2017	CAGTGTGTGGTGGGCTCCTAAAGTCATTCGTGTCCTTTCTGTACAGCATG	8	-	26877741-26877790	8qA2	Mus musculus BCL2-associated athanogene 4 (Bag4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SODD; 2410112I15Rik	SODD; 2410112I15Rik
Mus musculus	RefSeq	ILMN_207269	ILMN_210659	BAG4	NM_026121.3	NM_026121.3		67384	116686110	NM_026121.3	Bag4	NP_080397.1	ILMN_1243295	004830564	S	880	TTGCCTGGCCACGGTGAAGCACTTTCCGTCATGTACAGGCTCCCAGCCGA	8	-	26878878-26878881:26879754-26879799	8qA2	Mus musculus BCL2-associated athanogene 4 (Bag4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SODD; 2410112I15Rik	SODD; 2410112I15Rik
Mus musculus	RefSeq	ILMN_242338	ILMN_242338	HRH2	NM_001010973.2	NM_001010973.2		15466	118131131	NM_001010973.2	Hrh2	NP_001010973.1	ILMN_3149791	001070377	A	1473	TCCAGGAGCCAAAGCCGAGAAGGTAGATGGCAGGAGGAGAAGCCCCTGAA	13	+	54310345-54310394	13qB1	Mus musculus histamine receptor H2 (Hrh2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with histamine to initiate a change in cell activity. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans [goid 4969] [evidence IEA]		
Mus musculus	RefSeq	ILMN_242338	ILMN_242338	HRH2	NM_001010973.2	NM_001010973.2		15466	118131131	NM_001010973.2	Hrh2	NP_001010973.1	ILMN_3071068	006020594	I	2466	GGGCAGAAAGAGTCCAGGGATACAAGTCCATCCACCCAGGGCCAGACAAG	13	+	54317478-54317527	13qB1	Mus musculus histamine receptor H2 (Hrh2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with histamine to initiate a change in cell activity. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans [goid 4969] [evidence IEA]		
Mus musculus	Riken	ILMN_202968	ILMN_202968	A430010E21RIK	ri|A430010E21|PX00133N10|AK039823|478					AK039823	A430010E21Rik		ILMN_2553710	006400736	S	361	AATCATGACAGCAAACCTCTGTGAGAAGGTTGATTCTGGGGAGGAAAGCA										
Mus musculus	Riken	ILMN_207137	ILMN_207137	F730005M08RIK	ri|F730005M08|PL00002N20|AK089324|1423					AK089324	F730005M08Rik		ILMN_2585316	002600689	S	1129	GCAGCAGGAGATGATGGCCGCGCTGACTGATGCTATCCAGGACAAGAAGA										
Mus musculus	Riken	ILMN_201896	ILMN_201896	HIPK2	ri|4933408M17|PX00020C01|AK016742|1728					AK016742	Hipk2		ILMN_2545445	004010242	S	1552	GAGCACTTGCTGCTCTTACAGAGGACTTCAGTTTGCTTTCCATCACCCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system that can be controlled at will [goid 50882] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_201370	ILMN_201370	LOC382558	XM_356569.1	XM_356569.1			38092861	XM_356569.1	LOC382558		ILMN_1233663	006200326	S	2	TGGGGGTTGCTGTTGAAAGTGAAGAAATCAATGGGGAAGAGGAAGAAGTC										
Mus musculus	MEEBO	ILMN_191381	ILMN_191381	TUSC3	scl33886.11_9	NM_030254.2			31543279	NM_030254.2	Tusc3		ILMN_2478601	003780377	S	4	AGAGTGCAAATGGAATTTGTTTCCAGACCTTAAAAATAACAGATATTTGT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]				
Mus musculus	Riken	ILMN_204113	ILMN_204113	P4HA1	ri|B130019B13|PX00158A15|AK045008|2920					AK045008	P4ha1		ILMN_1215502	005270195	S	1219	GCCGAGCTACAGTACATGACCCTGAGACGGGGAAATTGACCACAGCACAG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The posttranslational modification of peptidyl-proline to form 4-hydroxy-L-proline; catalyzed by procollagen-proline,2-oxoglutarate-4-dioxygenase [goid 18401] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2 [goid 4656] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196607	ILMN_196607	GAL3ST2	NM_199366.2	NM_199366.2		381334	85861155	NM_199366.2	Gal3st2	NP_955398.2	ILMN_3117688	001240528	A	1238	CACACATAGATGACCAGAATCTGCGTCCTTACCAGGGTGGGAAGGCCAAT	1	+	95705292-95705341	1qD	Mus musculus galactose-3-O-sulfotransferase 2 (Gal3st2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate [goid 1733] [evidence IEA]	Gm988; GP3ST	Gm988; GP3ST
Mus musculus	RefSeq	ILMN_196607	ILMN_196607	GAL3ST2	NM_199366.2	NM_199366.2		381334	85861155	NM_199366.2	Gal3st2	NP_955398.2	ILMN_3042923	005130300	I	2690	GTTCTGCCACCTCTGTTTCCTCCAAGATGCCACTACCTGCTGAGAGGCTG	1	+	95706744-95706793	1qD	Mus musculus galactose-3-O-sulfotransferase 2 (Gal3st2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate [goid 1733] [evidence IEA]	Gm988; GP3ST	Gm988; GP3ST
Mus musculus	MEEBO	ILMN_217047	ILMN_217047	GPR146	scl080290.2_65	NM_030258.2			31981401	NM_030258.2	Gpr146		ILMN_2678521	007650152	S	1424	GCAGGCTGACCTTCGGCCTCCCTGGTATTTGGGCTTTCTAAATGAAGCGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197267	ILMN_197267	LOC212252	XM_138682.2	XM_138682.2			38074892	XM_138682.2	LOC212252		ILMN_1218339	005550739	S	640	ACTGTAGGGAAGGGTTAGGAGAAGGTTGGGGCAGATAGTGCTGAAGGAGG										
Mus musculus	RefSeq	ILMN_210060	ILMN_210060	DHX8	NM_144831.2	NM_144831.2		217207	56699439	NM_144831.2	Dhx8	NP_659080.2	ILMN_2601823	001260615	S	3757	TCTGTACAATCGGTATGAGGAGCCGAACGCCTGGAGAATCTCCCGAGCCT	11	+	101628110-101628159	11qD	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 8 (Dhx8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	KIAA4096; mDEAH6; Ddx8; mKIAA4096; MGC31290	KIAA4096; mDEAH6; Ddx8; mKIAA4096; MGC31290
Mus musculus	RefSeq	ILMN_214141	ILMN_235659	HMGN3	NM_026122.3	NM_026122.3		94353	146134952	NM_026122.3	Hmgn3	NP_080398.1	ILMN_2644719	004250121	S	624	CGCCCTTGCTTTACAATTTTAGTCCTGTGCAGACTGTGGTGTTTTTACTG				9qE2	Mus musculus high mobility group nucleosomal binding domain 3 (Hmgn3), transcript variant 1, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence ISS]	HMGN3b; TRIP7; 1110002A15Rik; HMGN3a; BB071015; 6330514M13Rik	HMGN3b; TRIP7; 1110002A15Rik; HMGN3a; BB071015; 6330514M13Rik
Mus musculus	RefSeq	ILMN_213828	ILMN_213828	AFF2	NM_008032.3	NM_008032.3		14266	153792807	NM_008032.3	Aff2	NP_032058.2	ILMN_1259438	004890520	S	4070	GGCTGCTAGCCATGTGAATATTACCAGTAATGTGCTTCGGGGCTATGAAC				XqA7.1	Mus musculus AF4/FMR2 family, member 2 (Aff2), mRNA.		The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]		Ox19; Fmr2; Oxh	Ox19; Fmr2; Oxh
Mus musculus	RefSeq	ILMN_198218	ILMN_198218	LOC210668	XM_140164.2	XM_140164.2			38082946	XM_140164.2	LOC210668		ILMN_1248331	005890240	S	324	GGAGCACAAGAACAGAATGAAGATGGTCAGAGGTGCTGCAAAGGCCAATG										
Mus musculus	MEEBO	ILMN_192713	ILMN_192713	PBX4	scl33745.8_3				15150792	NM_030555	Pbx4		ILMN_1216709	003310673	S	390	TTGCCACTGACCAATGGAAGTGACGTGGTTCTCACTCTGCGGACCCTGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1741] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10551] [evidence IC ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IC ]		
Mus musculus	RefSeq	ILMN_209791	ILMN_209791	LY6G6D	NM_033478.2	NM_033478.2		114654	51243039	NM_033478.2	Ly6g6d	NP_258439.1	ILMN_2599251	001340619	S	331	GTGGCAAGCTCCGTGACCCCCTTGTGCATCTTGGCTGCAGCTGTTACCAC	17	-	35211125-35211174	17qB1	Mus musculus lymphocyte antigen 6 complex, locus G6D (Ly6g6d), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			MEGT1; A930024F17Rik; G6d; NG32; G6f; NG25	MEGT1; A930024F17Rik; G6d; NG32; G6f; NG25
Mus musculus	RefSeq	ILMN_210744	ILMN_210744	ASGR1	NM_009714.2	NM_009714.2		11889	116256508	NM_009714.2	Asgr1	NP_033844.1	ILMN_2608703	007510050	S	899	TGTGCCCACTTCACGACGGATGGCCGCTGGAATGACGACGTCTGCAGGAG	11	+	69869929-69869940:69869916-69869953	11qB3	Mus musculus asialoglycoprotein receptor 1 (Asgr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	ASGPR1; Asgr-1; Asgr	ASGPR1; Asgr-1; Asgr
Mus musculus	RefSeq	ILMN_211082	ILMN_211082	JMJD5	NM_029842.1	NM_029842.1		77035	21313317	NM_029842.1	Jmjd5	NP_084118.1	ILMN_2821736	006420747	S	2266	TTCCCCAGTCTGAGCCTGCTCAACCTTACCAGTTCTTCTGTCTGGTGGCC	7	+	125253294-125253343	7qF3	Mus musculus jumonji domain containing 5 (Jmjd5), mRNA.				3110005O21Rik	3110005O21Rik
Mus musculus	RefSeq	ILMN_248802	ILMN_248802	TMEM87A	NM_173734.2	NM_173734.2		211499	31343465	NM_173734.2	Tmem87a	NP_776095.1	ILMN_2969172	003390341	S	2522	GCCAAGAGGCACTCTGTGTACGTGCTGTGATTATTCGCCCTGCAAGAGGG	2	-	120181373-120181422	2qE5	Mus musculus transmembrane protein 87A (Tmem87a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A930025J12Rik	A930025J12Rik
Mus musculus	RefSeq	ILMN_217285	ILMN_250644	BC051628	NM_199312.3	NM_199312.3		332713	145966849	NM_199312.3	BC051628	NP_955016.1	ILMN_2681457	007560445	S	1007	CCCTGGTCTATGAGCCCTGGCGGGACAGCCTCACCTTGCAGACCACGCCA				2qH4	Mus musculus cDNA sequence BC051628 (BC051628), mRNA.				1700026M20Rik; RP23-401M24.2; MGC58365	1700026M20Rik; RP23-401M24.2; MGC58365
Mus musculus	RefSeq	ILMN_209413	ILMN_209413	CACNB2	NM_023116.1	NM_023116.1		12296	29789143	NM_023116.1	Cacnb2	NP_075605.1	ILMN_2606862	000130463	S	956	TATGATGTGGTACCTTCCATGCGACCAGTGGTGCTGGTGGGCCCGTCTCT	2	+	14889334-14889383	2qA2	Mus musculus calcium channel, voltage-dependent, beta 2 subunit (Cacnb2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]	MGC129334; AW060387; Cchb2; MGC129335	MGC129334; AW060387; Cchb2; MGC129335
Mus musculus	RefSeq	ILMN_192713	ILMN_248724	PBX4	NM_001024954.1	NM_001024954.1		80720	68299790	NM_001024954.1	Pbx4	NP_001020125.1	ILMN_2677782	007150673	S	961	CACTGACCAATGGAAGTGACGTGGTTCTCACTCTGCGGACCCTGGCCTTC	8	+	72394495-72394544	8qB3.3	Mus musculus pre-B-cell leukemia homeobox 4 (Pbx4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1741] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10551] [evidence IC ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IC ]	2410015M21Rik; AI429113; AW045266	2410015M21Rik; AI429113; AW045266
Mus musculus	RefSeq	ILMN_222625	ILMN_248724	PBX4	NM_001024954.1	NM_001024954.1		80720	68299790	NM_001024954.1	Pbx4	NP_001020125.1	ILMN_1218585	005900133	S	511	GTAGGGTGAGGCCTGTGTCTTGCAGGGAGATGGAACACATGGTGAACACC	8	+	72388772-72388821	8qB3.3	Mus musculus pre-B-cell leukemia homeobox 4 (Pbx4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1741] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10551] [evidence IC ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IC ]	2410015M21Rik; AI429113; AW045266	2410015M21Rik; AI429113; AW045266
Mus musculus	RefSeq	ILMN_215487	ILMN_215487	FBXO6	NM_015797.3	NM_015797.3		50762	141801857	NM_015797.3	Fbxo6	NP_056612.1	ILMN_2660175	001260128	S	1788	GGGCAAGCCCATCAACTCAGTAGTGATAGTTGGCACCCACAGCTCTGACA	4	-	147519925-147519974	4qE2	Mus musculus F-box protein 6 (Fbxo6), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with any carbohydrate [goid 30246] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IDA]	Fbx6b; Fbxo6b; FBG2; AA408845; Fbs2	Fbx6b; Fbxo6b; FBG2; AA408845; Fbs2
Mus musculus	RefSeq	ILMN_210564	ILMN_210564	CHDH	NM_175343.4	NM_175343.4		218865	146198657	NM_175343.4	Chdh	NP_780552.1	ILMN_2633412	001980681	S	33	GCGTTTGCTAAGAAGACCTCTGTTTCCTCTTTGAGCGATTTAGGCTGCGG				14qB	Mus musculus choline dehydrogenase (Chdh), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells [goid 6066] [evidence IEA]; The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline [goid 19285] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: choline + acceptor = betaine aldehyde + reduced acceptor [goid 8812] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16614] [evidence IEA]	MGC30702; D630034H06Rik; AU041472	MGC30702; D630034H06Rik; AU041472
Mus musculus	RefSeq	ILMN_209718	ILMN_209718	ADAMTS20	NM_177431.3	NM_177431.3		223838	31982226	NM_177431.3	Adamts20	NP_803180.2	ILMN_2680000	004120189	S	5840	GGAAAGTGCATTCCTCACATGGCTACGGGGCTCTCAATTCAAGTACTGTG	15	-	94100731-94100780	15qE3	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20 (Adamts20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of melanocyte differentiation [goid 45636] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of melanocyte differentiation [goid 45636] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction [goid 9967] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]	ADAMTS-20; bt; ADAMST-20; Adamst20	ADAMTS-20; bt; ADAMST-20; Adamst20
Mus musculus	RefSeq	ILMN_209718	ILMN_209718	ADAMTS20	NM_177431.3	NM_177431.3		223838	31982226	NM_177431.3	Adamts20	NP_803180.2	ILMN_2598519	003120132	S	5826	GCGGAGGGTTCTGTGGAAAGTGCATTCCTCACATGGCTACGGGGCTCTCA	15	-	94100745-94100794	15qE3	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 20 (Adamts20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of melanocyte differentiation [goid 45636] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of melanocyte differentiation [goid 45636] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction [goid 9967] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]	ADAMTS-20; bt; ADAMST-20; Adamst20	ADAMTS-20; bt; ADAMST-20; Adamst20
Mus musculus	RefSeq	ILMN_211258	ILMN_211258	WDR63	NM_172864.1	NM_172864.1		242253	27370309	NM_172864.1	Wdr63	NP_766452.1	ILMN_3151570	004260170	A	1463	GACGGGCGGCCACAGAAGTAAAAAGACCTCTCTCAAGCCCATGTTTCTCC	3	-	146004301-146004316:146006118-146006151	3qH2	Mus musculus WD repeat domain 63 (Wdr63), mRNA.				4931433A13Rik	4931433A13Rik
Mus musculus	RefSeq	ILMN_211258	ILMN_211258	WDR63	NM_172864.1	NM_172864.1		242253	27370309	NM_172864.1	Wdr63	NP_766452.1	ILMN_3072779	001710379	I	893	TTTTCCTAAAAATGCTACCACTCAGTATTATCCAAGAGAATTCTCAGAAG	3	-	146020406-146020455	3qH2	Mus musculus WD repeat domain 63 (Wdr63), mRNA.				4931433A13Rik	4931433A13Rik
Mus musculus	RefSeq	ILMN_220199	ILMN_313909	LOC100047496	XR_033624.1	XR_033624.1		100047496	149254377	XR_033624.1	LOC100047496		ILMN_1219995	005340253	S	5122	GCTTTGTCATTCAAACCAGAAACCGTACTTGAGTTGTAAACTAGACAGTG					PREDICTED: Mus musculus similar to sno, strawberry notch homolog 1 (LOC100047496), misc RNA.					
Mus musculus	MEEBO	ILMN_210306	ILMN_210306	SFRP1	scl020377.12_22	NM_013834.1			7305480	NM_013834.1	Sfrp1		ILMN_2604282	004060398	S	2274	TGTGCTGTGGAAGGCAACTCTGTGCATGTGCTGTGGAGGAGATGGGCCTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186470	ILMN_186470	USP33	scl11620.1.1_23				18875421	NM_133247	Usp33		ILMN_2435804	004050195	S	19	GAGATTTCATTTGACCCCAAACAACCAAGAAAGGTGAGATGTTGCTCAGC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence ISA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186470	ILMN_186470	USP33	scl11620.1.1_23				18875421	NM_133247	Usp33		ILMN_2497209	005860300	S	19	CCTACAGTACACACCAAAACAAGGCGGCGCCCAAAGAACCCAAGGGCAGA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence ISA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219658	ILMN_219658	GAA	NM_008064.2	NM_008064.2		14387	31982354	NM_008064.2	Gaa	NP_032090.2	ILMN_1254199	002230068	S	3290	TCACCTGGCACTAGAGAATGTGGAGCTCGGCGTGGGGACATCGTGTCTGC	11	+	119146582-119146631	11qE2	Mus musculus glucosidase, alpha, acid (Gaa), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IMP]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5980] [evidence IMP]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IMP]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IMP]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; A process whereby force is generated within involuntary skeletal muscle tissue, resulting in a change in muscle geometry. This process occurs in the diaphragm. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The diaphragm is a striated muscle that is necessary for the process of respiratory gaseous exchange [goid 2086] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IMP]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IDA]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IMP]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IMP]	E430018M07Rik	E430018M07Rik
Mus musculus	RefSeq	ILMN_218944	ILMN_218944	CARHSP1	NM_025821.2	NM_025821.2		52502	27229012	NM_025821.2	Carhsp1	NP_080097.1	ILMN_1225035	007380364	S	2534	CACTCTGGTATGGTTAGACTTTGGGCAGCACATGGTTGACCTGCTAGTGA	16	-	8658945-8658994	16qA1	Mus musculus calcium regulated heat stable protein 1 (Carhsp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC101919; Crhsp-24; 1200011K09Rik; D16Ertd465e	MGC101919; Crhsp-24; 1200011K09Rik; D16Ertd465e
Mus musculus	RefSeq	ILMN_213426	ILMN_225463	P140	NM_018873.2	NM_018873.2		56013	116089328	NM_018873.2	P140	NP_061361.2	ILMN_2771584	002000735	S	4561	TGTTATGGAAGGTGCTTCTGGGGACAGCCTGCCCCTGGGGATCTGCCTTG	11	-	97373008-97373057	11qD	Mus musculus P140 gene (P140), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence ISA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IDA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p140Cap; mKIAA1684; SNIP	p140Cap; mKIAA1684; SNIP
Mus musculus	RefSeq	ILMN_212729	ILMN_212729	CCDC59	NM_025602.3	NM_025602.3		52713	146134978	NM_025602.3	Ccdc59	NP_079878.1	ILMN_1256220	002370564	S	972	GAAATATACTGCTTTGAAATAGGTCTGAGCTCACAGTGAGATATTTTCAG				10qD1	Mus musculus coiled-coil domain containing 59 (Ccdc59), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		D10Ertd718e; 2300004H16Rik	D10Ertd718e; 2300004H16Rik
Mus musculus	RefSeq	ILMN_212729	ILMN_212729	CCDC59	NM_025602.3	NM_025602.3		52713	146134978	NM_025602.3	Ccdc59	NP_079878.1	ILMN_2712584	004810180	S	290	CCCAGAGCACCTGAAACACCTCTATCTGGCCGAAGAGGAAAGACTCAGAA				10qD1	Mus musculus coiled-coil domain containing 59 (Ccdc59), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		D10Ertd718e; 2300004H16Rik	D10Ertd718e; 2300004H16Rik
Mus musculus	RefSeq	ILMN_211980	ILMN_243433	CHST13	XM_994764.1	XM_994764.1		71797	94377763	XM_994764.1	Chst13	XP_999858.1	ILMN_1255412	003290440	S	930	CCAGCGTCGCCTCTTTAACCTCTATAAGATGGACTTTCTGCTCTTCAATT				6qD1	PREDICTED: Mus musculus carbohydrate (chondroitin 4) sulfotransferase 13 (Chst13), mRNA.					
Mus musculus	RefSeq	ILMN_230540	ILMN_230540	OLFR1335	NM_207703.1	NM_207703.1		435804	70794769	NM_207703.1	Olfr1335	NP_997586.1	ILMN_3133658	003450201	A	713	TTCATATTGCCAAGGCAATTCTCAAGATTAAGTCCACCCAGGGGCGCTGC	4	-	118481705-118481754	4qD2.1	Mus musculus olfactory receptor 1335 (Olfr1335), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR259-12; Olfr1335-ps1	MOR259-12; Olfr1335-ps1
Mus musculus	RefSeq	ILMN_230540	ILMN_230540	OLFR1335	NM_207703.1	NM_207703.1		435804	70794769	NM_207703.1	Olfr1335	NP_997586.1	ILMN_3056687	003830072	I	33	TCTTACAGTCTCTACCATGTGGAGGATGTCAGGACAAAACCAAAGTTGGG	4	-	118482385-118482434	4qD2.1	Mus musculus olfactory receptor 1335 (Olfr1335), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR259-12; Olfr1335-ps1	MOR259-12; Olfr1335-ps1
Mus musculus	RefSeq	ILMN_230540	ILMN_230540	OLFR1335	NM_207703.1	NM_207703.1		435804	70794769	NM_207703.1	Olfr1335	NP_997586.1	ILMN_3163087	007330546	A	813	TCTTCCTGCTACTTACATCTACATGAGACCCAACTCCAGCAGCTCTTCTG	4	-	118481605-118481654	4qD2.1	Mus musculus olfactory receptor 1335 (Olfr1335), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR259-12; Olfr1335-ps1	MOR259-12; Olfr1335-ps1
Mus musculus	RefSeq	ILMN_206661	ILMN_226692	ENSMUSG00000045946	XM_884978.2	XM_884978.2		620583	94392819	XM_884978.2	ENSMUSG00000045946	XP_890071.2	ILMN_1229554	005700326	S	2689	CAACTACAGGGGTTGGGGTGTCATTGGCATCTGGTAGGTAAAGTTGCTGG	12	+	50504910-50504959	12qB3	PREDICTED: Mus musculus predicted gene, ENSMUSG00000045946 (ENSMUSG00000045946), mRNA.					
Mus musculus	Riken	ILMN_202129	ILMN_202129	2900027M19RIK	ri|2900027M19|ZX00068F13|AK013604|1945					AK013604	2900027M19Rik		ILMN_1258835	002970398	S	1567	GACTTTGCCTCAGCAGTGGGAGGCATATGTGTGATAGGAAAGGTTCATGG										
Mus musculus	RefSeq	ILMN_185430	ILMN_246791	IDS	NM_001038991.1	NM_001038991.1		15931	84781805	NM_001038991.1	Ids	NP_001034080.1	ILMN_1214470	005490722	S	2680	CCAGACAGAAGTCCTTCCTCTAACATTGTGAAAACTGTTCAATTACCAGG	X	-	67599627-67599676	XqA7.1	Mus musculus iduronate 2-sulfatase (Ids), transcript variant 3, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of the 2-sulfate groups of the L-iduronate 2-sulfate units of dermatan sulfate, heparan sulfate and heparin [goid 4423] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISA]	AW214631	AW214631
Mus musculus	RefSeq	ILMN_185430	ILMN_246791	IDS	NM_001038991.1	NM_001038991.1		15931	84781805	NM_001038991.1	Ids	NP_001034080.1	ILMN_2769978	001010368	S	1400	GCAGCTCCATGACTTGGAAGAGGAGCCAGACTTGTTTGGTAATCCCCGGG	X	-	67613228-67613277	XqA7.1	Mus musculus iduronate 2-sulfatase (Ids), transcript variant 3, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of the 2-sulfate groups of the L-iduronate 2-sulfate units of dermatan sulfate, heparan sulfate and heparin [goid 4423] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISA]	AW214631	AW214631
Mus musculus	RefSeq	ILMN_198798	ILMN_242703	LOC637548	XM_913272.3	XM_913272.3		637548	149257421	XM_913272.3	LOC637548	XP_918365.3	ILMN_1221641	000160241	S	2392	GGCAAGACTATGGTTGCTGTGGAAGTGTTCTGTATCTTGGCATCAAGTGC					PREDICTED: Mus musculus similar to putative pheromone receptor (LOC637548), mRNA.					
Mus musculus	Riken	ILMN_202871	ILMN_202871	4930518C17RIK	ri|4930518C17|PX00033E24|AK076864|1052					AK076864	4930518C17Rik		ILMN_1233128	003420196	S	926	TATCCACAGGCCGTGAAGCTGGATCCCTTCCTCACACTGCATACAAATGG										
Mus musculus	Riken	ILMN_206746	ILMN_206746	D630015M03RIK	ri|D630015M03|PX00196H14|AK085360|1406					AK085360	D630015M03Rik		ILMN_1253971	001440437	S	702	GTCCAACTTGAGGGAGCTGGTTCTCTAGGGTGATGTCTCCACTCTGACCT										
Mus musculus	RefSeq	ILMN_199646	ILMN_199646	LOC386534	XM_359377.1	XM_359377.1			38075489	XM_359377.1	LOC386534		ILMN_2535977	006270044	S	359	CCATAGATGAGGCCTTGGAGGCCCCTGCATGTGACGCTTCAGTTCCCCTT										
Mus musculus	RefSeq	ILMN_184246	ILMN_234672	DBT	NM_010022.2	NM_010022.2		13171	141803124	NM_010022.2	Dbt	NP_034152.1	ILMN_1242012	001500470	S	347	CCAGCCGTTACGATGGCGTCATTAAGAGGCTCTATTACAATCTAGATGAT	3	+	116236268-116236317	3qG1	Mus musculus dihydrolipoamide branched chain transacylase E2 (Dbt), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with lipoic acid, 1,2-dithiolane-3-pentanoic acid [goid 31405] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: 2-methylpropanoyl-CoA + enzyme N6-(dihydrolipoyl)lysine = CoA + enzyme N6-(S-[2-methylpropanoyl]dihydrolipoyl)lysine [goid 43754] [evidence IEA]	D3Wsu60e	D3Wsu60e
Mus musculus	RefSeq	ILMN_184246	ILMN_234672	DBT	NM_010022.2	NM_010022.2		13171	141803124	NM_010022.2	Dbt	NP_034152.1	ILMN_2662920	002190594	S	2408	AAAAGGTCTACTTTAATCAGATAGCTTCAGGGGGATTCTAATTCAAGGCT	3	+	116252077-116252126	3qG1	Mus musculus dihydrolipoamide branched chain transacylase E2 (Dbt), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with lipoic acid, 1,2-dithiolane-3-pentanoic acid [goid 31405] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: 2-methylpropanoyl-CoA + enzyme N6-(dihydrolipoyl)lysine = CoA + enzyme N6-(S-[2-methylpropanoyl]dihydrolipoyl)lysine [goid 43754] [evidence IEA]	D3Wsu60e	D3Wsu60e
Mus musculus	RefSeq	ILMN_198077	ILMN_198077	LOC243368	XM_144659.3	XM_144659.3			38081664	XM_144659.3	LOC243368		ILMN_2530411	003180564	S	1280	CCATCTTGGCCTCCAGTGCAGGGTTGCTAGCATGAATCTTTTTCCCTAAG										
Mus musculus	RefSeq	ILMN_198138	ILMN_198138	LOC224628	XM_148771.1	XM_148771.1			20899219	XM_148771.1	LOC224628		ILMN_2530621	007040075	S	315	CCCAGGGAGAGGTTCAAGTGCTAGGCGAGATGGGTGTCATCATGGAGGAA										
Mus musculus	RefSeq	ILMN_251504	ILMN_251504	OLFR723	NM_001011530.1	NM_001011530.1		259147	58372133	NM_001011530.1	Olfr723	NP_001011530.1	ILMN_2884451	002120301	S	283	CAGGGCTGCATGGCCCAGATGTTCTTCATGCATTTCTTTGGGGGTGCTGA	14	-	50548885-50548934	14qC1	Mus musculus olfactory receptor 723 (Olfr723), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR247-4; MOR247-3P	MOR247-4; MOR247-3P
Mus musculus	RefSeq	ILMN_219065	ILMN_227439	MUC20	NM_146071.1	NM_146071.1		224116	22122564	NM_146071.1	Muc20	NP_666183.1	ILMN_1250530	006900068	S	1992	TGCTAGCTGCAACCAGGCATGGCCTCTGTGCCAGAAGAACGGTGATGCCA	16	-	32786356-32786405	16qB3	Mus musculus mucin 20 (Muc20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence ISA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IPI]; The series of molecular signals generated as a consequence of the hepatocyte growth factor receptor binding to one of its physiological ligands [goid 48012] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BC026367; MGC31081	BC026367; MGC31081
Mus musculus	Riken	ILMN_206551	ILMN_206551	D330050B18RIK	ri|D330050B18|PX00193C04|AK084830|2736					AK084830	D330050B18Rik		ILMN_1224134	004810037	S	2653	GGGACACAACAACCTTAGCGTCCCTGATGTACCTGGCTGTGCAACACTTG										
Mus musculus	Riken	ILMN_205875	ILMN_205875	GLB1	ri|C130062G03|PX00170M16|AK048460|2778					AK048460	Glb1		ILMN_1256272	000520068	S	2441	GCTATAAGGGCAGAGGAAGAGGAGAGGGGAGAGAGAGAGCTGGGGTGTGA						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A multimeric enzyme complex that in E. coli is a heterooctamer made up of four alpha subunits and four beta subunits. Catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides [goid 9341] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]		
Mus musculus	Riken	ILMN_204129	ILMN_204129	B130044C16RIK	ri|B130044C16|PX00158O09|AK045184|1818					AK045184	B130044C16Rik		ILMN_2562602	002450451	S	1507	CCTAGTGTGGAAATCGGAACCCCTGATGTTGATGTTCATGGGCTAGGGGG										
Mus musculus	RefSeq	ILMN_212962	ILMN_212962	PAOX	NM_153783.2	NM_153783.2		212503	28173565	NM_153783.2	Paox	NP_722478.2	ILMN_2795698	003140102	S	1670	GTTGGAGTCTGGCTTGGTCTGATCATGGATGCCCCGTTAAGTGTTGTACG	7	+	139985587-139985636	7qF4	Mus musculus polyamine oxidase (exo-N4-amino) (Paox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups [goid 6598] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups [goid 6598] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IDA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence ISO]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AI118225; 2410012F02Rik; Pao	AI118225; 2410012F02Rik; Pao
Mus musculus	Riken	ILMN_204976	ILMN_204976	B830013J19RIK	ri|B830013J19|PX00072L12|AK046813|3822					AK046813	B830013J19Rik		ILMN_1244745	004200288	S	3695	AGGTCATGTGCTTATTTGGGGAAACTCGGGTCTTACCAGGCCTCTTTGAC										
Mus musculus	RefSeq	ILMN_201909	ILMN_196576	DLGAP1	NM_177639.5	NM_177639.5		224997	146198534	NM_177639.5	Dlgap1	NP_808307.2	ILMN_1216649	006250102	S	4104	ACGTTTCTGCTTCTGAGGGGCGGCAAGGACAATGCCAGAGGAGAGTTCGG				17qE1.3	Mus musculus discs, large (Drosophila) homolog-associated protein 1 (Dlgap1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Gkap; D17Bwg0511e; KIAA4162; BB075781; AI848168; GKPA/SAPAP; Sapap1; mKIAA4162; 9630002F18; AI845682; 4933422O14Rik	Gkap; D17Bwg0511e; KIAA4162; BB075781; AI848168; GKPA/SAPAP; Sapap1; mKIAA4162; 9630002F18; AI845682; 4933422O14Rik
Mus musculus	RefSeq	ILMN_188514	ILMN_196576	DLGAP1	NM_177639.5	NM_177639.5		224997	146198534	NM_177639.5	Dlgap1	NP_808307.2	ILMN_2453312	004060274	S	4471	AGGCTGGTTGTTGGCTTGCAATTTAGTCGTCATTGATGGGCTGTGTGTCC				17qE1.3	Mus musculus discs, large (Drosophila) homolog-associated protein 1 (Dlgap1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Gkap; D17Bwg0511e; KIAA4162; BB075781; AI848168; GKPA/SAPAP; Sapap1; mKIAA4162; 9630002F18; AI845682; 4933422O14Rik	Gkap; D17Bwg0511e; KIAA4162; BB075781; AI848168; GKPA/SAPAP; Sapap1; mKIAA4162; 9630002F18; AI845682; 4933422O14Rik
Mus musculus	RefSeq	ILMN_203689	ILMN_196576	DLGAP1	NM_177639.5	NM_177639.5		224997	146198534	NM_177639.5	Dlgap1	NP_808307.2	ILMN_2559232	001240162	S	2799	GAGACCCACTTCCCAGGACTTGGCGGGGTTTTGGGACATGCTGCAGTTGT				17qE1.3	Mus musculus discs, large (Drosophila) homolog-associated protein 1 (Dlgap1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Gkap; D17Bwg0511e; KIAA4162; BB075781; AI848168; GKPA/SAPAP; Sapap1; mKIAA4162; 9630002F18; AI845682; 4933422O14Rik	Gkap; D17Bwg0511e; KIAA4162; BB075781; AI848168; GKPA/SAPAP; Sapap1; mKIAA4162; 9630002F18; AI845682; 4933422O14Rik
Mus musculus	RefSeq	ILMN_221037	ILMN_221037	NKX6-1	NM_144955.2	NM_144955.2		18096	118130385	NM_144955.2	Nkx6-1	NP_659204.1	ILMN_1245585	000130082	S	1617	CGGTTCCCCCGGCCCCCAGTATCCTGGCTGCTCGCCGGGCCTTTACTATT	5	-	102088344-102088393	5qE4	Mus musculus NK6 homeobox 1 (Nkx6-1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of glia cell differentiation [goid 45686] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of glia cell differentiation [goid 45687] [evidence IGI]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IGI]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in the commitment of a cell to become an interneuron in the ventral spinal cord [goid 21913] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results the commitment of a cell to become a motor neuron in the ventral spinal cord [goid 21912] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system [goid 48709] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Nkx6.1; NKX6A	Nkx6.1; NKX6A
Mus musculus	RefSeq	ILMN_219126	ILMN_219126	CC2D2A	NM_172274.1	NM_172274.1		231214	26986582	NM_172274.1	Cc2d2a	NP_758478.1	ILMN_2704619	006590451	S	5229	CGTTTTGTCTGTTTGGATCTATGTTGCTTCTCTTGTACGGAACAGGTAAT	5	+	44132054-44132093:44132094-44132103	5qB3	Mus musculus coiled-coil and C2 domain containing 2A (Cc2d2a), mRNA.					
Mus musculus	RefSeq	ILMN_210243	ILMN_210243	CLEC2D	NM_053109.2	NM_053109.2		93694	133892677	NM_053109.2	Clec2d	NP_444339.1	ILMN_2603647	007570181	S	973	TGAGGGACATAGGAGAGTTAGCTACCCCACACTGATGAGTCCCAAAAAGG	6	+	129136319-129136368	6qF3	Mus musculus C-type lectin domain family 2, member d (Clec2d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	A defense response that is mediated by cells [goid 6968] [evidence TAS]; The process of protecting a cell from natural killer cell mediated cytotoxicity [goid 42270] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISS]; Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]	MGC123478; Clr-b; Ocil; Clrb	MGC123478; Clr-b; Ocil; Clrb
Mus musculus	RefSeq	ILMN_208756	ILMN_208756	SLC24A2	NM_172426.2	NM_172426.2		76376	124378012	NM_172426.2	Slc24a2	NP_766014.1	ILMN_1237921	005690093	S	3863	CACTGAGTGTCCTCAAGCTCTGTCTGACATCTTGTATGACTTCTACAAGG	4	-	86635709-86635758	4qC4	Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (Slc24a2), transcript variant 1, mRNA.				6330417K15Rik; 2810021B17Rik; AI847460	6330417K15Rik; 2810021B17Rik; AI847460
Mus musculus	RefSeq	ILMN_195594	ILMN_208756	SLC24A2	NM_172426.2	NM_172426.2		76376	124378012	NM_172426.2	Slc24a2	NP_766014.1	ILMN_2516974	003130204	S	10404	GGCAAACTGTACATAGGCTGTTTGGAGTGGTGTGCTTGGGTCACGTGGTC	4	-	86629168-86629217	4qC4	Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (Slc24a2), transcript variant 1, mRNA.				6330417K15Rik; 2810021B17Rik; AI847460	6330417K15Rik; 2810021B17Rik; AI847460
Mus musculus	RefSeq	ILMN_208756	ILMN_208756	SLC24A2	NM_172426.2	NM_172426.2		76376	124378012	NM_172426.2	Slc24a2	NP_766014.1	ILMN_2616926	003190743	S	1241	TGGGTGAAGCAAATGATATCTCGCAATAATGTTATCAAGGTGACAGTGCC	4	-	86872802-86872851	4qC4	Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (Slc24a2), transcript variant 1, mRNA.				6330417K15Rik; 2810021B17Rik; AI847460	6330417K15Rik; 2810021B17Rik; AI847460
Mus musculus	RefSeq	ILMN_186506	ILMN_208756	SLC24A2	NM_172426.2	NM_172426.2		76376	124378012	NM_172426.2	Slc24a2	NP_766014.1	ILMN_2436109	004760192	S	9907	AACATTAATAATATTTCTGTCTTAAAAATATATAACTTATCTTTTGTGCC	4	-	86629665-86629714	4qC4	Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (Slc24a2), transcript variant 1, mRNA.				6330417K15Rik; 2810021B17Rik; AI847460	6330417K15Rik; 2810021B17Rik; AI847460
Mus musculus	RefSeq	ILMN_218286	ILMN_218286	SLC25A39	NM_026542.1	NM_026542.1		68066	13386045	NM_026542.1	Slc25a39	NP_080818.1	ILMN_2855261	002750753	S	1175	TGAAAGTCGGGGAGCAACCGGCTCTTGCACGGGTGGGATCAGGAGACTGA	11	-	102219463-102219509:102219510-102219512	11qD	Mus musculus solute carrier family 25, member 39 (Slc25a39), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC144573; MGC144572; 3010027G13Rik; D11Ertd333e	MGC144573; MGC144572; 3010027G13Rik; D11Ertd333e
Mus musculus	Riken	ILMN_206633	ILMN_206633	4833447I12RIK	ri|4833447I12|PX00313B20|AK076545|2034					AK076545	4833447I12Rik		ILMN_2581543	002470682	S	912	CCGAGAGGGAGGGCGGAAATTGAAATTAGCAAGTGCCTTGGCCATCACAG										
Mus musculus	MEEBO	ILMN_219230	ILMN_219230	SEC31L1	scl26327.26.63_55	XM_132230.3			38080333	XM_132230.3	Sec31l1		ILMN_2765024	000990689	S	2641	AGTATTCCTTCGGAACAGGGGGGGCAGCAGCTTATCGACCTCAACAGCCT										
Mus musculus	RefSeq	ILMN_197213	ILMN_197213	LOC329381	XM_287099.1	XM_287099.1			28484902	XM_287099.1	LOC329381		ILMN_2527316	005910187	S	242	GGACACCAGGCAGGCTCTCCTTCAGGGTTCTATCTGGCAAAGGGACACGT										
Mus musculus	MEEBO	ILMN_209545	ILMN_209545	1810024B03RIK	scl18710.3.1_66	NM_198630.1			38348501	NM_198630.1	1810024B03Rik		ILMN_2596821	003440349	S	1041	GGCAAGTGTATAGAATCTCTGAGCTGAATTAACTGTGCCAATGAGGACTC								Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201146	ILMN_201146	LOC382031	XM_358691.1	XM_358691.1			38089462	XM_358691.1	LOC382031		ILMN_2541258	005080554	S	603	CAAATGCCATGAGAATTGTGAGGCTGGAGGCAGAATTGGCTTCATTTTTG										
Mus musculus	RefSeq	ILMN_217258	ILMN_229233	D630002J15RIK	XM_885435.2	XM_885435.2		77522	94377270	XM_885435.2	D630002J15Rik	XP_890528.1	ILMN_2681042	002760703	S	171	AGGGCACCTCTGCAGCAACATGGCCCAGTCAGGTGTCTTCCTCCGAAACC	6	+	38059425-38059443:38059444-38059474	6qB1	PREDICTED: Mus musculus RIKEN cDNA D630002J15 gene (D630002J15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215140	ILMN_215140	FSCN2	NM_172802.2	NM_172802.2		238021	142366463	NM_172802.2	Fscn2	NP_766390.1	ILMN_2655965	000430753	S	1501	CGGTGACTTGGCGGAAGATTTCCTCTTTGAGTTCCGAGAGCGTGGCCGTC	11	+	120229270-120229319	11qE2	Mus musculus fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) (Fscn2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC130378; MGC130379; C630046B20Rik; A930022G03	MGC130378; MGC130379; C630046B20Rik; A930022G03
Mus musculus	RefSeq	ILMN_187558	ILMN_257024	GNPDA2	NM_001038015.1	NM_001038015.1		67980	83999998	NM_001038015.1	Gnpda2	NP_001033104.1	ILMN_2737101	005960286	S	951	GAGACCCAGTTGTGCTCCGAAGAACCTTTCCATACTGATAAAATTTCAGC	5	-	69967078-69967127	5qC3.1	Mus musculus glucosamine-6-phosphate deaminase 2 (Gnpda2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3 [goid 4342] [evidence ISA]	4933412A11Rik; KIAA4008; Sb52; Gnp2; BB189630; GNPDA; 4921523I18Rik; mKIAA4008	4933412A11Rik; KIAA4008; Sb52; Gnp2; BB189630; GNPDA; 4921523I18Rik; mKIAA4008
Mus musculus	RefSeq	ILMN_187558	ILMN_257024	GNPDA2	NM_001038015.1	NM_001038015.1		67980	83999998	NM_001038015.1	Gnpda2	NP_001033104.1	ILMN_1256805	002650368	S	1437	CAAGTCCTGCTATTCATTAATCAAGGAAATCTGAAGAGATGACAGTGCCC	5	-	69966592-69966641	5qC3.1	Mus musculus glucosamine-6-phosphate deaminase 2 (Gnpda2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3 [goid 4342] [evidence ISA]	4933412A11Rik; KIAA4008; Sb52; Gnp2; BB189630; GNPDA; 4921523I18Rik; mKIAA4008	4933412A11Rik; KIAA4008; Sb52; Gnp2; BB189630; GNPDA; 4921523I18Rik; mKIAA4008
Mus musculus	RefSeq	ILMN_213089	ILMN_213089	OLFR1199	NM_146458.1	NM_146458.1		258450	33239037	NM_146458.1	Olfr1199	NP_666669.1	ILMN_2633484	003120735	S	607	GCCATTTGCACAGTGAGTTTCCTTGTGCTAATGTTCTCCTATGTCATTAT	2	-	88596174-88596223	2qE1	Mus musculus olfactory receptor 1199 (Olfr1199), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR230-8	MOR230-8
Mus musculus	RefSeq	ILMN_212393	ILMN_212393	PPARG	NM_011146.2	NM_011146.2		19016	142367023	NM_011146.2	Pparg	NP_035276.1	ILMN_1221893	003450465	S	22	CTCTGTTTTATGCTGTTATGGGTGAAACTCTGGGAGATTCTCCTGTTGAC	6	+	115372112-115372128:115372129-115372161	6qE3	Mus musculus peroxisome proliferator activated receptor gamma (Pparg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IC ]	The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus [goid 33993] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of long-chain fatty acids into, out of, within or between cells. A long-chain fatty acid is an aliphatic compound with a terminal carboxyl group and with a chain length greater than C12 [goid 15909] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that modulates the frequency, rate or extent of adipocyte differentiation [goid 45598] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [pmid 16132694] [evidence IEP]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [pmid 16132694] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer [goid 50544] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IPI]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]	PPAR-gamma; PPARgamma; PPAR-gamma2; Nr1c3	PPAR-gamma; PPARgamma; PPAR-gamma2; Nr1c3
Mus musculus	RefSeq	ILMN_212393	ILMN_212393	PPARG	NM_011146.2	NM_011146.2		19016	142367023	NM_011146.2	Pparg	NP_035276.1	ILMN_1221060	002320402	S	1436	GATGACAGACCTCAGGCAGATCGTCACAGAGCACGTGCAGCTACTGCATG	6	+	115440093-115440142	6qE3	Mus musculus peroxisome proliferator activated receptor gamma (Pparg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IC ]	The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus [goid 33993] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of long-chain fatty acids into, out of, within or between cells. A long-chain fatty acid is an aliphatic compound with a terminal carboxyl group and with a chain length greater than C12 [goid 15909] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that modulates the frequency, rate or extent of adipocyte differentiation [goid 45598] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [pmid 16132694] [evidence IEP]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [pmid 16132694] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer [goid 50544] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IPI]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]	PPAR-gamma; PPARgamma; PPAR-gamma2; Nr1c3	PPAR-gamma; PPARgamma; PPAR-gamma2; Nr1c3
Mus musculus	RefSeq	ILMN_212393	ILMN_212393	PPARG	NM_011146.2	NM_011146.2		19016	142367023	NM_011146.2	Pparg	NP_035276.1	ILMN_1221594	006380066	S	287	CACAAGAGCTGACCCAATGGTTGCTGATTACAAATATGACCTGAAGCTCC	6	+	115390024-115390073	6qE3	Mus musculus peroxisome proliferator activated receptor gamma (Pparg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IC ]	The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus [goid 33993] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of long-chain fatty acids into, out of, within or between cells. A long-chain fatty acid is an aliphatic compound with a terminal carboxyl group and with a chain length greater than C12 [goid 15909] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that modulates the frequency, rate or extent of adipocyte differentiation [goid 45598] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [pmid 16132694] [evidence IEP]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [pmid 16132694] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer [goid 50544] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IPI]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]	PPAR-gamma; PPARgamma; PPAR-gamma2; Nr1c3	PPAR-gamma; PPARgamma; PPAR-gamma2; Nr1c3
Mus musculus	RefSeq	ILMN_215413	ILMN_215413	H2-M1	NM_177636.2	NM_177636.2		224756	144226229	NM_177636.2	H2-M1	NP_808304.2	ILMN_2659185	001230332	S	930	GGCTATTGTTATTGCTTTGGTACTTGGAGCACTCCTTATGGGAGCAGTGA	17	-	36869351-36869400	17qB1	Mus musculus histocompatibility 2, M region locus 1 (H2-M1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			H-2M1; H2-Qa-Mb1; Mb1	H-2M1; H2-Qa-Mb1; Mb1
Mus musculus	RefSeq	ILMN_224270	ILMN_258049	AIP	NM_016666.2	NM_016666.2		11632	118131102	NM_016666.2	Aip	NP_057875.1	ILMN_2777655	000940435	S	1268	CACCTGTCAATCCCCCACTGTCACTTTGCGCTTCTGTGTATATAAAGGCC	19	-	4114475-4114524	19qA	Mus musculus aryl-hydrocarbon receptor-interacting protein (Aip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence IPI]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IPI]	D19Bwg1412e; Ara9; Xap2; AA408703; AW476050; Fkbp16	D19Bwg1412e; Ara9; Xap2; AA408703; AW476050; Fkbp16
Mus musculus	Riken	ILMN_203561	ILMN_203561	9430020B04RIK	ri|9430020B04|PX00108E07|AK034652|1430					AK034652	9430020B04Rik		ILMN_1237393	002810630	S	1044	CTGCAGTGAGGCCCGTGGGAGTTTGACTGCAAGTCTTCCATATGGTGTGG										
Mus musculus	RefSeq	ILMN_218021	ILMN_319623	LOC100045678	XM_001475512.1	XM_001475512.1		100045678	149262279	XM_001475512.1	LOC100045678	XP_001475562.1	ILMN_2690556	004860092	S	178	TTCCTGACAACCAAGTGAAATCATCAGTGCCTGGAACGGCATCAGCACAC					PREDICTED: Mus musculus hypothetical protein LOC100045678 (LOC100045678), mRNA.					
Mus musculus	RefSeq	ILMN_222518	ILMN_222518	GPR63	NM_030733.3	NM_030733.3		81006	142384644	NM_030733.3	Gpr63	NP_109658.2	ILMN_2750800	005890138	S	2094	GCTGCTCATTGCTATCTTATCAGAGTCAAATCCCTCTGCCTCTCAGTTGG	4	+	24936104-24936153	4qA3	Mus musculus G protein-coupled receptor 63 (Gpr63), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISS]	PSP24beta; Psp24-2	PSP24beta; Psp24-2
Mus musculus	RefSeq	ILMN_219822	ILMN_226108	PDSS2	XM_988380.1	XM_988380.1		71365	94388115	XM_988380.1	Pdss2	XP_993474.1	ILMN_2713983	006020711	S	1625	TATTAAGCAAGTTTTTACCTATGTTACAGAAAGAATCCCCAAATATGAAG				10qB2	PREDICTED: Mus musculus prenyl (solanesyl) diphosphate synthase, subunit 2, transcript variant 7 (Pdss2), mRNA.		The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated nonidentical subunits [goid 51290] [evidence IPI]; The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IDA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IDA]; Any process that modulates the levels of body fluids [goid 50878] [evidence IMP]	Catalysis of the reaction: all-trans-octaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-nonaprenyl diphosphate [goid 50347] [evidence IPI]; Catalysis of the reaction: all-trans-hexaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-heptaprenyl diphosphate [goid 10] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217000	ILMN_252784	THAP4	NM_025920.3	NM_025920.3		67026	79750224	NM_025920.3	Thap4	NP_080196.3	ILMN_2773540	001500341	S	2067	CTGCTGACACTGAAGTGTTGTCCAGGTGTTCTTGTAATGGCATAGAAAAC	1	-	95602011-95602060	1qD	Mus musculus THAP domain containing 4 (Thap4), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2010320B01Rik	2010320B01Rik
Mus musculus	Riken	ILMN_206768	ILMN_206768	D930049D19RIK	ri|D930049D19|PX00203N12|AK086744|2250					AK086744	D930049D19Rik		ILMN_2582563	003310148	S	2022	GTGTGCCCACCAGTGCCACAGTGGAGTGAAGACTATGGGTATTGCAGTCA										
Mus musculus	RefSeq	ILMN_220631	ILMN_227164	APOBEC4	NM_001081197.1	NM_001081197.1		71281	124487114	NM_001081197.1	Apobec4	NP_001074666.1	ILMN_1221296	000460678	S	965	GGTCTTCTGAGCCGACAAAAAGAGAATCAGAACCGAGAAGCCTGGGCAGC	1	+	154604073-154604122	1qG3	Mus musculus apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) (Apobec4), mRNA.		Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2 [goid 16814] [evidence IEA]	4933431M11Rik	4933431M11Rik
Mus musculus	RefSeq	ILMN_218358	ILMN_218358	PPP1R13B	NM_011625.1	NM_011625.1		21981	45592935	NM_011625.1	Ppp1r13b	NP_035755.1	ILMN_1237626	005560484	S	2681	AAGTCCTGTGGCTGAGGCTCCTTCAGAGGAGGATCAAGTCCCTCCAGCAC	12	-	113071376-113071425	12qF1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 13B (Ppp1r13b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		p85; AW545810; AI449786; Tp53bp2; ASPP1; Trp53bp2	p85; AW545810; AI449786; Tp53bp2; ASPP1; Trp53bp2
Mus musculus	RefSeq	ILMN_218358	ILMN_218358	PPP1R13B	NM_011625.1	NM_011625.1		21981	45592935	NM_011625.1	Ppp1r13b	NP_035755.1	ILMN_2967455	000430669	S	3894	CTGCGTTTCATTACCTATGGCGTTCTGCTGTGGCTGGACATGCACGCCTC	12	-	113067058-113067107	12qF1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 13B (Ppp1r13b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		p85; AW545810; AI449786; Tp53bp2; ASPP1; Trp53bp2	p85; AW545810; AI449786; Tp53bp2; ASPP1; Trp53bp2
Mus musculus	RefSeq	ILMN_218358	ILMN_218358	PPP1R13B	NM_011625.1	NM_011625.1		21981	45592935	NM_011625.1	Ppp1r13b	NP_035755.1	ILMN_2732718	007330440	S	2683	TCCTGTGGCTGAGGCTCCTTCAGAGGAGGATCAAGTCCCTCCAGCACCTC	12	-	113071374-113071423	12qF1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 13B (Ppp1r13b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		p85; AW545810; AI449786; Tp53bp2; ASPP1; Trp53bp2	p85; AW545810; AI449786; Tp53bp2; ASPP1; Trp53bp2
Mus musculus	RefSeq	ILMN_201029	ILMN_313598	LOC100040318	XM_001473928.1	XM_001473928.1		100040318	149274087	XM_001473928.1	LOC100040318	XP_001473978.1	ILMN_1252848	002600414	S	516	GAGCCCTGGTTGGCAAAGCGGTACAACAAAAATTTGAGGGGAAAGATGGC	Y|NT_166422.1	-	306704-306753		PREDICTED: Mus musculus similar to spermiogenesis specific transcript on the Y 1 (LOC100040318), mRNA.					
Mus musculus	RefSeq	ILMN_192121	ILMN_226308	PFKP	NM_019703.3	NM_019703.3		56421	142384557	NM_019703.3	Pfkp	NP_062677.1	ILMN_2673233	002900482	S	513	CACAGTGCAGAAGTATTCCTACCTCAACGTGGTGGGTATGGTGGGCTCCA	13	-	6620231-6620280	13qA1	Mus musculus phosphofructokinase, platelet (Pfkp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence ISS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	9330125N24Rik; PFK-C; 1200015H23Rik	9330125N24Rik; PFK-C; 1200015H23Rik
Mus musculus	RefSeq	ILMN_192121	ILMN_226308	PFKP	NM_019703.3	NM_019703.3		56421	142384557	NM_019703.3	Pfkp	NP_062677.1	ILMN_1237695	000290110	S	1632	CCCCATGGTTATGGTTCCTGCTACTGTCTCCAACAATGTGCCGGGTTCCG	13	-	6597148-6597197	13qA1	Mus musculus phosphofructokinase, platelet (Pfkp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence ISS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	9330125N24Rik; PFK-C; 1200015H23Rik	9330125N24Rik; PFK-C; 1200015H23Rik
Mus musculus	RefSeq	ILMN_217488	ILMN_217488	NUDT9	NM_028794.3	NM_028794.3		74167	142387632	NM_028794.3	Nudt9	NP_083070.2	ILMN_2683802	004260524	S	824	TAAGGGGTATGTTGACGACCCTCGGAACACTGACAATGCGTGGATGGAGA	5	+	104490698-104490747	5qE5	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 9 (Nudt9), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of ADP, adenosine 5'-diphosphate [goid 46032] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of IDP, inosine 5'-diphosphate [goid 46709] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: ADP-ribose + H2O = AMP + D-ribose 5-phosphate [goid 47631] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IDA]	AI462474; 1190002C07Rik	AI462474; 1190002C07Rik
Mus musculus	MEEBO	ILMN_210107	ILMN_210107	MAP3K5	scl026408.25_3	NM_008580.1			6678795	NM_008580.1	Map3k5		ILMN_2777836	003140674	S	3419	CCCTCATCTCGAGCCTCAGAGAGTTTGTGAGGTCCACTGACCGAAAAATC							A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210107	ILMN_210107	MAP3K5	scl026408.25_3	NM_008580.1			6678795	NM_008580.1	Map3k5		ILMN_2777842	005550112	S	3427	TCGAGCCTCAGAGAGTTTGTGAGGTCCACTGACCGAAAAATCATAGCCAC							A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187395	ILMN_242582	1700020I22RIK	XM_980183.2	XM_980183.2		72262	149260065	XM_980183.2	1700020I22Rik	XP_985277.1	ILMN_2443759	006580661	S	19	TCAATACTATTATATGAGCTTTCCTAGTATCATCCAGCTGCCCGAGGAGA	9	-	71015382-71015431	9qD	PREDICTED: Mus musculus RIKEN cDNA 1700020I22 gene (1700020I22Rik), mRNA.					
Mus musculus	MEEBO	ILMN_223260	ILMN_223260	DVL3	scl013544.15_3	XM_147262.1			20892042	XM_147262.1	Dvl3		ILMN_2761555	000990601	S	2343	TTGTGGATGTGATGTGATCAGGGCCCCTCTCCAGCTCTTACCTCTCAGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221192	ILMN_221192	OLFR981	NM_146286.1	NM_146286.1		258283	22129712	NM_146286.1	Olfr981	NP_666398.1	ILMN_1217634	004560180	S	809	GGGTGGTAGCTGTCTTCTACACAGTCATTACTCCCTTACTTAACCCCATC	9	+	39830788-39830837	9qA5.1	Mus musculus olfactory receptor 981 (Olfr981), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR223-8	MOR223-8
Mus musculus	Riken	ILMN_205886	ILMN_205886	ATP8A1	ri|A430030K23|PX00134L06|AK039919|2934					AK039919	Atp8a1		ILMN_1212689	001430156	S	2738	GCGGCAACCAGGTACATGGCACCTGTCACTAATCCCACCTACTTCAAAGG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213883	ILMN_213883	DTX1	NM_008052.3	NM_008052.3		14357	141802233	NM_008052.3	Dtx1	NP_032078.2	ILMN_2641793	006860022	S	3495	AGCGAGGGGAGGAGGCCTTGTTCAGGCTATACACGCATCAAGCTGAGCAG	5	-	121130443-121130492	5qF	Mus musculus deltex 1 homolog (Drosophila) (Dtx1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA4160; Fxit1; mKIAA4160	KIAA4160; Fxit1; mKIAA4160
Mus musculus	RefSeq	ILMN_217769	ILMN_255351	NANOG	NM_028016.2	NM_028016.2		71950	153791181	NM_028016.2	Nanog	NP_082292.1	ILMN_1245732	006400433	S	277	GGAACGCCTCATCAATGCCTGCAGTTTTTCATCCCGAGAACTATTCTTGC				6qF2	Mus musculus Nanog homeobox (Nanog), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of a stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells [goid 48863] [evidence IMP]; Any process that stops, prevents or reduces the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 10454] [evidence IDA]; Any process that stops, prevents or reduces the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 10454] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types [goid 17145] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that restricts, stops or prevents a cell from specifying into an endoderm cell [goid 42664] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The process by which a cell becomes committed to become part of the mesoderm [goid 1710] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones [goid 8406] [pmid 15108323] [evidence IEP]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [pmid 15108323] [evidence IEP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ENK; 2410002E02Rik; ecat4	ENK; 2410002E02Rik; ecat4
Mus musculus	RefSeq	ILMN_209198	ILMN_209198	LCE1F	NM_026394.2	NM_026394.2		67828	142347665	NM_026394.2	Lce1f	NP_080670.1	ILMN_2593523	006040703	S	632	CCTGTGAAATGTTCTGCATTCTGTTCAGGTGATAACAATGTCCCTTTGCA	3	-	92522653-92522702	3qF1	Mus musculus late cornified envelope 1F (Lce1f), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110055J05Rik	1110055J05Rik
Mus musculus	Riken	ILMN_205474	ILMN_205474	B3GAT3	ri|C130060B16|PX00170B01|AK048428|1415					AK048428	B3Gat3		ILMN_2572833	004590673	S	1033	GTGGTTTGGGACCAGCAGCCAAAAAGCCCTTCTGTCACCATGTCTTCAGC										
Mus musculus	Riken	ILMN_203137	ILMN_203137	4732458O05RIK	ri|4732458O05|PX00051L04|AK028819|2465					AK028819	4732458O05Rik		ILMN_1234747	006760100	S	2182	CCTGTTCTGGCGTCCCATGACTCAGGAAAACCTCCCACCTGGAAGCTCAT										
Mus musculus	RefSeq	ILMN_216820	ILMN_216820	OLFR969	NM_146826.1	NM_146826.1		258823	22129208	NM_146826.1	Olfr969	NP_667037.1	ILMN_2675725	000770551	S	774	GTACTTGCAGCCATCTTCGGTCAACTCTATGGATCAAGGGAAAGTGTCTT	9	+	39603735-39603784	9qA5.1	Mus musculus olfactory receptor 969 (Olfr969), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-7	MOR171-7
Mus musculus	Riken	ILMN_207231	ILMN_207231	NUP98	ri|G430037K05|PH00001A20|AK089973|1723					AK089973	Nup98		ILMN_2586024	001940630	S	1315	GGTACAACCAGTGGCGGGCTCTTCGGGTTTGGCACAAATAACAGTGGGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]				
Mus musculus	Riken	ILMN_203785	ILMN_203785	USP29	ri|A230060C20|PX00128O16|AK038752|1854					AK038752	Usp29		ILMN_1253685	005290136	S	758	GGCTCACTTCTTTAACTCCAGCCCTTGGGAGCCAGAGGCAGACAGATCTC							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213656	ILMN_213656	LDLRAD3	NM_178886.2	NM_178886.2		241576	124001548	NM_178886.2	Ldlrad3	NP_849217.2	ILMN_1217129	000430475	S	3627	AACTCCCTCTACCTTGTAATTGATGATTGTTTTTGAAATGCAACTAAGAT	2	-	101790508-101790557	2qE2	Mus musculus low density lipoprotein receptor class A domain containing 3 (Ldlrad3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI194318; 6430500P08	AI194318; 6430500P08
Mus musculus	RefSeq	ILMN_236098	ILMN_236098	EG432867	NM_001037751.2	NM_001037751.2		432867	142379964	NM_001037751.2	EG432867	NP_001032840.1	ILMN_3161722	003850148	S	185	GACGAGATCGGTGCTTGCCGGAGAAGATGGAAATGTTGCAGGCTGTGGTG	14	-	63596571-63596620	14qD1	Mus musculus predicted gene, EG432867 (EG432867), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defb42	Defb42
Mus musculus	RefSeq	ILMN_197241	ILMN_252696	CNTNAP3	NM_001081129.1	NM_001081129.1		238680	124487466	NM_001081129.1	Cntnap3	NP_001074598.1	ILMN_1219653	005270243	S	3728	GATCCGCAGAAGATAGACAGCCCCTTCCTAACACAGACAGGAGTGACCCT	13	-	64841866-64841915	13qB3	Mus musculus contactin associated protein-like 3 (Cntnap3), mRNA.					
Mus musculus	MEEBO	ILMN_191903	ILMN_191903	ACVRINP1	scl28082.1.352_180				7656905	NM_015823	Acvrinp1		ILMN_1257176	005860181	S	17	GTTTGAAAATTGGGTTGAGCTTTAGGCTTAGTAGTTCTATTTCTGGGGGG										
Mus musculus	RefSeq	ILMN_214630	ILMN_211154	6330578E17RIK	NM_198006.3	NM_198006.3		76178	113461995	NM_198006.3	6330578E17Rik	NP_932123.3	ILMN_2650106	003450544	S	3425	TCCTCTGCCCGTTAATAGTTGACTCTGGTTGAATTTTTGGTCATCACATC	1	-	37474264-37474313	1qB	Mus musculus RIKEN cDNA 6330578E17 gene (6330578E17Rik), mRNA.				1700001A24Rik	1700001A24Rik
Mus musculus	RefSeq	ILMN_211154	ILMN_211154	6330578E17RIK	NM_198006.3	NM_198006.3		76178	113461995	NM_198006.3	6330578E17Rik	NP_932123.3	ILMN_1248618	005690735	S	510	CTAAACAACTATGGGCTAAGAATGTGTCTGGGGAATTACCTAATGAAGAG	1	-	37477179-37477228	1qB	Mus musculus RIKEN cDNA 6330578E17 gene (6330578E17Rik), mRNA.				1700001A24Rik	1700001A24Rik
Mus musculus	RefSeq	ILMN_224046	ILMN_252526	HGSNAT	NM_029884.1	NM_029884.1		52120	115292432	NM_029884.1	Hgsnat	NP_084160.1	ILMN_2773699	005670035	S	2411	GAAAACTGACTTTCCACGTGTATGCGCATGCCGACCGTACCGCCGTGGTT	8	-	27055149-27055198	8qA2	Mus musculus heparan-alpha-glucosaminide N-acetyltransferase (Hgsnat), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + heparan alpha-D-glucosaminide = CoA + heparan N-acetyl-alpha-D-glucosaminide [goid 15019] [evidence IEA]	Tmem76; D8Ertd354e; AW208455; 9430010M12Rik	Tmem76; D8Ertd354e; AW208455; 9430010M12Rik
Mus musculus	RefSeq	ILMN_195832	ILMN_311238	LOC100044968	XM_001473421.1	XM_001473421.1		100044968	149261251	XM_001473421.1	LOC100044968	XP_001473471.1	ILMN_1234929	004900563	S	6861	CTCCGCTCCGGTGTTGACTGTTGATGTATTTGATATTCTGCTTATCTCCC					PREDICTED: Mus musculus similar to modulator recognition factor 2 (LOC100044968), mRNA.					
Mus musculus	RefSeq	ILMN_198055	ILMN_198055	LOC328699	XM_285181.2	XM_285181.2			38081098	XM_285181.2	LOC328699		ILMN_2530331	001850576	S	1302	GGCGGTGGATGTGTACATGTGGGTCAGCTCCCTCTTTGTGTTTCTGTCCG										
Mus musculus	RefSeq	ILMN_196854	ILMN_196854	LOC245572	XM_142042.1	XM_142042.1			20985127	XM_142042.1	LOC245572		ILMN_1236280	004050152	S	286	AGGCGAGCATTTGCCAGTTGTTGGCTTCTGACAGGTCCCAGTATCAAGGA										
Mus musculus	RefSeq	ILMN_215332	ILMN_215332	ENTPD2	NM_009849.1	NM_009849.1		12496	6753347	NM_009849.1	Entpd2	NP_033979.1	ILMN_1237670	000160411	S	1667	TGTCAGGTCTCTTAGCCTGCGACTCAGGGTGAGGTCCATTCCGAGTGGAG	2	+	25256657-25256706	2qA3	Mus musculus ectonucleoside triphosphate diphosphohydrolase 2 (Entpd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside diphosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with diphosphate on its glycose moiety [goid 9181] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IDA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	NTPDase-2; Cd39l1	NTPDase-2; Cd39l1
Mus musculus	Riken	ILMN_203014	ILMN_203014	6030400N17RIK	ri|6030400N17|PX00056C09|AK031275|2990					AK031275	6030400N17Rik		ILMN_1239797	002570719	S	2780	CTGGCAGTTCCAACCTGGCTGTTATCCTCTCTGTTCTAGGACTTTGCGGC										
Mus musculus	MEEBO	ILMN_222210	ILMN_222210	A430096B05RIK	scl31588.1.1_66	XM_358369.1			38086143	XM_358369.1	A430096B05Rik		ILMN_2746339	003170554	S	2113	CTATCATTTCTGAGGAGTGAGTCGGGGACAGCAGGAAAGCAGCTAGCCAC										
Mus musculus	MEEBO	ILMN_191787	ILMN_191787	D8ERTD531E	scl33880.11_117				31981031	NM_033560	D8Ertd531e		ILMN_1218656	004150608	S	4758	ATACATACTGCTTGTTTTTCCAAATATGTAGTACAGTTTGGCATAGATGA										
Mus musculus	Riken	ILMN_201890	ILMN_201890	4933401P20RIK	ri|4933401P20|PX00019B15|AK016608|1114					AK016608	4933401P20Rik		ILMN_2545407	006860301	S	590	GCACACACAAGGACCCCACCCGTGGGGCTAACTACCTGCCGGAGAGTGAG										
Mus musculus	RefSeq	ILMN_204248	ILMN_228331	EG666920	XM_987017.2	XM_987017.2		666920	149252397	XM_987017.2	EG666920	XP_992111.2	ILMN_1254967	006840195	S	1259	AAGCCTAAAGTGGGGGAAATTGCACTGTTTGGGGTGGGGGTGGGGCGAAG	4	-	54957423-54957472	4qB3	PREDICTED: Mus musculus predicted gene, EG666920 (EG666920), mRNA.					
Mus musculus	Riken	ILMN_203744	ILMN_203744	9930021O22RIK	ri|9930021O22|PX00120B22|AK036887|3421					AK036887	9930021O22Rik		ILMN_1226628	006760612	S	3022	TACTGTCCAGGGCATGAGCCAGCCTGTAAGGAGCTTCCCGTTTGCTGCTG										
Mus musculus	RefSeq	ILMN_218274	ILMN_218274	CENPH	NM_021886.1	NM_021886.1		26886	11230783	NM_021886.1	Cenph	NP_068686.1	ILMN_2693785	003180685	S	954	CACAGAACCTTTCGTTTTAATTGTGCTCATTAAAGTGGCATCCTCTGCAG	13	-	101529876-101529925	13qD1	Mus musculus centromere protein H (Cenph), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence ISA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 51383] [evidence TAS]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence ISA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence ISA]	Interacting selectively with a kinetochore, a proteinaceous structure on a condensed chromosome, beside the centromere, to which the spindle fibers are attached [goid 43515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	AU044255; CENP-H; 2810046K12Rik; 2610042E16Rik; 2410018A12Rik; 1700021I11Rik; ENP	AU044255; CENP-H; 2810046K12Rik; 2610042E16Rik; 2410018A12Rik; 1700021I11Rik; ENP
Mus musculus	MEEBO	ILMN_191168	ILMN_191168	1110062M06RIK	scl8139.1.1_103						1110062M06Rik		ILMN_2476742	000150193	S	15	CTGGATTCCCGTTCCAGTAGCAGTAAGTAGGAGAGATCACAAACCCAGTC										
Mus musculus	RefSeq	ILMN_226672	ILMN_226672	ZFP219	NM_027248.1	NM_027248.1		69890	30794417	NM_027248.1	Zfp219	NP_081524.1	ILMN_2896229	000430307	S	2667	CACAGTGCCTTAGAAGTGGCAGAGGTGAGGGTCAAAGAACGGGGTCCTCG	14	-	52625973-52626022	14qC2	Mus musculus zinc finger protein 219 (Zfp219), mRNA.				2010302A17Rik	2010302A17Rik
Mus musculus	Riken	ILMN_204668	ILMN_204668	9530004N09RIK	ri|9530004N09|PX00111G04|AK035243|2325					AK035243	9530004N09Rik		ILMN_1223057	007510605	S	2219	GGGCTCAAGAGAGAGAAAGAGACAGAAAAGGAGGTTGTGACAGAAAGGGG										
Mus musculus	MEEBO	ILMN_221836	ILMN_221836	4930528G09RIK	scl26855.7.3_2	XM_355576.1			38079547	XM_355576.1	4930528G09Rik		ILMN_2741039	005310577	S	100	AAAACCTGCGGGAAGATGTGGTGCTCAAGCAGAAGCAGCTAGTGAGGGAG										
Mus musculus	RefSeq	ILMN_218046	ILMN_218046	OLFR556	NM_146754.1	NM_146754.1		258749	22129340	NM_146754.1	Olfr556	NP_666965.1	ILMN_2690884	003180563	S	880	CCTATCATTTATGGTATTAGGACCAGACAAATCCGGGAGCGGATATGGAG	7	+	109819315-109819364	7qE3	Mus musculus olfactory receptor 556 (Olfr556), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR41-1	MOR41-1
Mus musculus	RefSeq	ILMN_196586	ILMN_311557	LOC100048613	XM_001480380.1	XM_001480380.1		100048613	149249654	XM_001480380.1	LOC100048613	XP_001480430.1	ILMN_2647188	002760603	S	77	TCTGCGGCCCTCGCAGAACTTCCAGCAGCGACATGTTGGGCCAGAGTATC					PREDICTED: Mus musculus similar to cytochrome c oxidase, subunit VIIc, transcript variant 1 (LOC100048613), mRNA.					
Mus musculus	RefSeq	ILMN_192799	ILMN_249697	HSPA13	NM_030201.2	NM_030201.2		110920	55741785	NM_030201.2	Hspa13	NP_084477.1	ILMN_2705030	003310307	S	2628	TCAGTGTTGTAATAACTAAAGAAGAGAACTAAAATTTTGAAAAAGATCAA	16	-	75756783-75756832	16qC3.1	Mus musculus heat shock protein 70kDa family, member 13 (Hspa13), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	B230217N24Rik; 1600002I10Rik; AV006182	B230217N24Rik; 1600002I10Rik; AV006182
Mus musculus	RefSeq	ILMN_196741	ILMN_196741	H2-D1	NM_010380.2	NM_010380.2		14964	31088857	NM_010380.2	H2-D1	NP_034510.2	ILMN_2608090	004390451	S	889	GATGGGGCAAGGAGGAGCCTCCTTCATCCACCAAGACTAACACAGTAATC	17	+	34874106-34874121:34874240-34874273	17qB1	Mus musculus histocompatibility 2, D region locus 1 (H2-D1), mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MHC B7.2; H2-D; H-2D; H2-L	MHC B7.2; H2-D; H-2D; H2-L
Mus musculus	RefSeq	ILMN_212620	ILMN_212620	STUB1	NM_019719.3	NM_019719.3		56424	118130581	NM_019719.3	Stub1	NP_062693.1	ILMN_2628532	001240056	S	1527	GATGGGTTCTGAACTGCTCCCCTTCTCAGCATACCCCTTGCTGGACCATG	17	-	25967676-25967725	17qA3.3	Mus musculus STIP1 homology and U-Box containing protein 1 (Stub1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex that possesses ubiquitin conjugating enzyme activity [goid 31371] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glucocorticoids [goid 31943] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32436] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [evidence ISS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence TAS]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Stops, prevents or reduces the activity of chaperones of the Hsp70/Hsc70 class [goid 30191] [evidence ISS]; Interacting selectively with Hsp70 proteins, any of a group of heat shock proteins around 70kDa in size [goid 30544] [evidence ISS]; Interacting selectively with Hsp70 proteins, any of a group of heat shock proteins around 70kDa in size [goid 30544] [evidence TAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with a tetratricopeptide repeat (TPR) domain of a protein, the consensus sequence of which is defined by a pattern of small and large hydrophobic amino acids and a structure composed of helices [goid 30911] [evidence ISS]; Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [evidence ISS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence TAS]; Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [evidence IDA]	Chip; 0610033N24Rik; 2210017D18Rik; AW046544; 2310040B03Rik	Chip; 0610033N24Rik; 2210017D18Rik; AW046544; 2310040B03Rik
Mus musculus	RefSeq	ILMN_217357	ILMN_217357	GKAP1	NM_019832.2	NM_019832.2		56278	34328243	NM_019832.2	Gkap1	NP_062806.1	ILMN_2890328	007550475	S	1321	GCTGTGCGACTGCTAAACTGCAGGTTTTTGTTGAAGGAACTAAAAGCAAC	13	-	58243121-58243170	13qB1	Mus musculus G kinase anchoring protein 1 (Gkap1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of guanylyl cyclase and a subsequent increase in the concentration of cyclic GMP [goid 7199] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gkap42; D13Ertd340e; 42kDa; 4933400B15Rik	Gkap42; D13Ertd340e; 42kDa; 4933400B15Rik
Mus musculus	RefSeq	ILMN_197859	ILMN_197859	LOC194227	XM_110518.3	XM_110518.3			38078958	XM_110518.3	LOC194227		ILMN_2529616	001940747	S	1476	CCTGAGCTCCTGGATATACTCAAAGCCAAAAGACAGCTCCAAAGTGTCTC										
Mus musculus	Riken	ILMN_203059	ILMN_203059	A930029N17RIK	ri|A930029N17|PX00067M15|AK044651|1594					AK044651	A930029N17Rik		ILMN_1241459	007560170	S	1461	CTTTGGCCATCAGGCTCGGTGACAAGTGCCCTTACCATCTCTCCAGCTCC										
Mus musculus	MEEBO	ILMN_223844	ILMN_223844	OLFR462	scl0258406.1_75				33239009	NM_146411	Olfr462		ILMN_2770285	000610070	S	431	TGGTGGTAACTGCATGGATTGTGGGATTTGTCCACTCGATTGTCCAGCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_223303	ILMN_223303	1810026J23RIK	NM_178619.3	NM_178619.3		69773	42475995	NM_178619.3	1810026J23Rik	NP_848734.1	ILMN_2912439	006900632	S	2928	GGTGAGGTGGCTCAGCAGGGGAAGACATGTTCAGTCAAGGCAACCACCTG	9	+	21400172-21400221	9qA3	Mus musculus RIKEN cDNA 1810026J23 gene (1810026J23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_243592	ILMN_243592	GM1040	NM_001033457.1	NM_001033457.1		433864	85701970	NM_001033457.1	Gm1040	NP_001028629.1	ILMN_2795677	001500025	S	2742	GCAGGTCAGGGGAAAGGGGGAGAAAAGATTAAGCCATGAGGAGAGGGTTG	5	+	29782153-29782202	5qB1	Mus musculus gene model 1040, (NCBI) (Gm1040), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210423	ILMN_210423	SNX1	NM_019727.2	NM_019727.2		56440	71043943	NM_019727.2	Snx1	NP_062701.2	ILMN_2605465	000630215	S	1976	TTTTTCAGGATGTGGTTTAGGAACTGGGAATAACGTTTTCTGTTACTCCT	9	-	65935987-65936036	9qC	Mus musculus sorting nexin 1 (Snx1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217937	ILMN_217937	TSC22D3	NM_010286.3	NM_010286.3		14605	116517341	NM_010286.3	Tsc22d3	NP_034416.3	ILMN_2701664	004810358	S	162	CTATAGCGGCGCGCCAGCAGCCACTCAAACCAGCCACAGCTCCCCGGCAA	X	-	137077513-137077562	XqF1	Mus musculus TSC22 domain family, member 3 (Tsc22d3), transcript variant 2, mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	DIP; Gilz; Dsip1; Tilz3; TSC-22R	DIP; Gilz; Dsip1; Tilz3; TSC-22R
Mus musculus	RefSeq	ILMN_195957	ILMN_225781	LHX3	NM_001039653.1	NM_001039653.1		16871	89001115	NM_001039653.1	Lhx3	NP_001034742.1	ILMN_1260455	004590753	S	1817	CTGTTCTGGAATGCCGTGTGTTGGGGGAGTAGAGCTTTCTGGAGCCCCTT	2	-	26056073-26056122	2qA3	Mus musculus LIM homeobox protein 3 (Lhx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of medial motor column neurons. Medial motor column neurons are generated at all rostrocaudal levels and send axons to the axial muscles (medial group) and to the body wall muscles (lateral group). Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21526] [evidence IGI]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	P-LIM; mLim-3; Lim3; mLIM3	P-LIM; mLim-3; Lim3; mLIM3
Mus musculus	RefSeq	ILMN_194285	ILMN_225781	LHX3	NM_001039653.1	NM_001039653.1		16871	89001115	NM_001039653.1	Lhx3	NP_001034742.1	ILMN_2505040	004480670	S	2047	CTGTCTCAGACACAAAGCTTGACCACGTGAAAGTTAAGATCATTCCTGAA	2	-	26055843-26055892	2qA3	Mus musculus LIM homeobox protein 3 (Lhx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of medial motor column neurons. Medial motor column neurons are generated at all rostrocaudal levels and send axons to the axial muscles (medial group) and to the body wall muscles (lateral group). Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21526] [evidence IGI]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	P-LIM; mLim-3; Lim3; mLIM3	P-LIM; mLim-3; Lim3; mLIM3
Mus musculus	RefSeq	ILMN_225781	ILMN_225781	LHX3	NM_001039653.1	NM_001039653.1		16871	89001115	NM_001039653.1	Lhx3	NP_001034742.1	ILMN_2784382	006560192	S	1820	TTCTGGAATGCCGTGTGTTGGGGGAGTAGAGCTTTCTGGAGCCCCTTCTC	2	-	26056070-26056119	2qA3	Mus musculus LIM homeobox protein 3 (Lhx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of medial motor column neurons. Medial motor column neurons are generated at all rostrocaudal levels and send axons to the axial muscles (medial group) and to the body wall muscles (lateral group). Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21526] [evidence IGI]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	P-LIM; mLim-3; Lim3; mLIM3	P-LIM; mLim-3; Lim3; mLIM3
Mus musculus	RefSeq	ILMN_212185	ILMN_212185	PAIP2	NM_026420.2	NM_026420.2		67869	142372306	NM_026420.2	Paip2	NP_080696.1	ILMN_1258515	001710307	S	1300	CTTCATATTTGAGTAGGTTAAGCTGCCATACGTGTTCAGTGTGAATAGTG	18	+	35776715-35776764	18qB2	Mus musculus polyadenylate-binding protein-interacting protein 2 (Paip2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence ISO]	Antagonizes the ribosome-mediated translation of mRNA into a polypeptide via direct binding to nucleic acid [goid 900] [evidence ISO]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence ISO]	AU045972; 2310050K10Rik	AU045972; 2310050K10Rik
Mus musculus	RefSeq	ILMN_196784	ILMN_196784	OTTMUSG00000007655	NM_206870.1	NM_206870.1		242517	46047407	NM_206870.1	OTTMUSG00000007655	NP_996753.1	ILMN_1215054	007330475	S	213	CCAGAATGCTCAAGCCATCCCTGTCCTACAAGAGCTGACCCAGCAGGTCC	4	-	88203887-88203936	4qC4	Mus musculus predicted gene, OTTMUSG00000007655 (OTTMUSG00000007655), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	RP23-67C1.1; MuIFN-alpha-A	RP23-67C1.1; MuIFN-alpha-A
Mus musculus	RefSeq	ILMN_196784	ILMN_196784	OTTMUSG00000007655	NM_206870.1	NM_206870.1		242517	46047407	NM_206870.1	OTTMUSG00000007655	NP_996753.1	ILMN_2655985	002060037	S	221	CTCAAGCCATCCCTGTCCTACAAGAGCTGACCCAGCAGGTCCTGAACATC	4	-	88203879-88203928	4qC4	Mus musculus predicted gene, OTTMUSG00000007655 (OTTMUSG00000007655), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	RP23-67C1.1; MuIFN-alpha-A	RP23-67C1.1; MuIFN-alpha-A
Mus musculus	RefSeq	ILMN_213667	ILMN_213667	ROCK2	NM_009072.1	NM_009072.1		19878	6677760	NM_009072.1	Rock2	NP_033098.1	ILMN_2891157	005960482	S	3703	GAAGGAGAAAGTAAGAAGGAACCAGAGTTTCCAGTGGAACCAGTGGGAGA	12	+	17003037-17003086	12qA1.1	Mus musculus Rho-associated coiled-coil containing protein kinase 2 (Rock2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Rho-kinase; mKIAA0619; ROKalpha; B230113H15Rik; Rock-II	Rho-kinase; mKIAA0619; ROKalpha; B230113H15Rik; Rock-II
Mus musculus	RefSeq	ILMN_186830	ILMN_186830	ZFP532	NM_207255.1	NM_207255.1		328977	46402262	NM_207255.1	Zfp532	NP_997138.1	ILMN_2901029	000160672	S	4689	CACTGCCGACGACGTGCTCTTGGTCACATCCCTGTATAGTTCTCTGGGAA	18	+	65848283-65848332	18qE1	Mus musculus zinc finger protein 532 (Zfp532), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA1629; C530030I18Rik	mKIAA1629; C530030I18Rik
Mus musculus	RefSeq	ILMN_186830	ILMN_186830	ZFP532	NM_207255.1	NM_207255.1		328977	46402262	NM_207255.1	Zfp532	NP_997138.1	ILMN_2438849	004810162	S	4648	TAGAGTCGTCTCAGCACCCTCTCAAGGTCACCTGACTGGAGCACTGCCGA	18	+	65848242-65848291	18qE1	Mus musculus zinc finger protein 532 (Zfp532), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA1629; C530030I18Rik	mKIAA1629; C530030I18Rik
Mus musculus	RefSeq	ILMN_187155	ILMN_187155	TOMM34	NM_025996.3	NM_025996.3		67145	146134994	NM_025996.3	Tomm34	NP_080272.1	ILMN_2441635	003990204	S	1530	GGGAGTGCAAAATCAACCCCACTTTGACTCCTTGGAGAGGTAGCAGCCTT				2qH3	Mus musculus translocase of outer mitochondrial membrane 34 (Tomm34), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Tomm34b; Tomm34a; 2610100K07Rik; TOM34	Tomm34b; Tomm34a; 2610100K07Rik; TOM34
Mus musculus	RefSeq	ILMN_220765	ILMN_220765	INO80B	NM_023547.1	NM_023547.1		70020	12963728	NM_023547.1	Ino80b	NP_076036.1	ILMN_2915166	006560246	S	946	CAGGCCCTTTGCAGCCTACAGTGCTACCGCATCAACCTGCAGCTACGGCT	6	-	83071864-83071913	6qC3	Mus musculus INO80 complex subunit B (Ino80b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HMG1YL4; 2510009I23Rik; Papa1; Hmga1l4	HMG1YL4; 2510009I23Rik; Papa1; Hmga1l4
Mus musculus	Riken	ILMN_205343	ILMN_205343	A730049B06RIK	ri|A730049B06|PX00150N22|AK043026|1555					AK043026	A730049B06Rik		ILMN_1232007	000630612	S	1268	ACAGAGTGTCTCATTGTGCCTGAGCTCATGGATTGGGCTGTGCTGGCTGG										
Mus musculus	RefSeq	ILMN_184193	ILMN_245386	MPP7	XM_919250.2	XM_919250.2		75739	94404190	XM_919250.2	Mpp7	XP_924343.2	ILMN_2730947	006900136	S	1596	TTTTAATGCACAGATGACACCAACCTATAGTTACAAATTATCTTCTAAAT				18qA1	PREDICTED: Mus musculus membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7), transcript variant 12 (Mpp7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215791	ILMN_215791	NUDT21	NM_026623.3	NM_026623.3		68219	109948297	NM_026623.3	Nudt21	NP_080899.1	ILMN_1234759	006590164	S	730	GCTGCACCATTGTTTGAGCTGTATGACAATGCACCGGGGTATGGACCCAT	8	-	96546704-96546753	8qC5	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 21 (Nudt21), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU014860; 3110048P04Rik; 5730530J16Rik; 25kDa; Cpsf5; AW549947	AU014860; 3110048P04Rik; 5730530J16Rik; 25kDa; Cpsf5; AW549947
Mus musculus	RefSeq	ILMN_215791	ILMN_215791	NUDT21	NM_026623.3	NM_026623.3		68219	109948297	NM_026623.3	Nudt21	NP_080899.1	ILMN_2979052	000780762	S	834	TCCTGTATGCAGAAGTAAAAGAAGCCGTCTCTATGAGCACAGCTTACACG	8	-	96543530-96543579	8qC5	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 21 (Nudt21), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU014860; 3110048P04Rik; 5730530J16Rik; 25kDa; Cpsf5; AW549947	AU014860; 3110048P04Rik; 5730530J16Rik; 25kDa; Cpsf5; AW549947
Mus musculus	MEEBO	ILMN_192224	ILMN_192224	4931420C21RIK	scl070965.1_29						4931420C21Rik		ILMN_1226047	000070553	S	6	CCTCATAGCAAGTAGATCGATGTAATACATTGTCTCAAGAGGAACACCCC										
Mus musculus	RefSeq	ILMN_189999	ILMN_189999	TRPV4	NM_022017.1	NM_022017.1		63873	11528501	NM_022017.1	Trpv4	NP_071300.1	ILMN_1231520	006580743	S	2995	ATTTATTGCTCTCCTCAGGAAAATGGGGTGGCAGGAGTCCACCCGCGGCT	5	-	115072312-115072361	5qF	Mus musculus transient receptor potential cation channel, subfamily V, member 4 (Trpv4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulated release of vasopressin from secretory granules into the blood [goid 30103] [evidence IMP]; The series of molecular signals initiated in response to osmotic change [goid 7231] [evidence IDA]; The series of molecular signals initiated in response to osmotic change [goid 7231] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IPI]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment [goid 42538] [evidence IMP]; Any process that modulates the rate or extent of the response to osmotic stress [goid 47484] [evidence IMP]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5034] [evidence IDA];  [goid 5034] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]	MGC150050; VROAC; 0610033B08Rik; VR-OAC; Trp12; OTRPC4; VRL-2	MGC150050; VROAC; 0610033B08Rik; VR-OAC; Trp12; OTRPC4; VRL-2
Mus musculus	RefSeq	ILMN_189999	ILMN_189999	TRPV4	NM_022017.1	NM_022017.1		63873	11528501	NM_022017.1	Trpv4	NP_071300.1	ILMN_2466284	005260682	S	1266	ATGAGGACACCCGGCATCTGTCTCGCAAGTTCAAGGACTGGGCCTATGGG	5	-	115083239-115083288	5qF	Mus musculus transient receptor potential cation channel, subfamily V, member 4 (Trpv4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulated release of vasopressin from secretory granules into the blood [goid 30103] [evidence IMP]; The series of molecular signals initiated in response to osmotic change [goid 7231] [evidence IDA]; The series of molecular signals initiated in response to osmotic change [goid 7231] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IPI]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment [goid 42538] [evidence IMP]; Any process that modulates the rate or extent of the response to osmotic stress [goid 47484] [evidence IMP]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5034] [evidence IDA];  [goid 5034] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]	MGC150050; VROAC; 0610033B08Rik; VR-OAC; Trp12; OTRPC4; VRL-2	MGC150050; VROAC; 0610033B08Rik; VR-OAC; Trp12; OTRPC4; VRL-2
Mus musculus	RefSeq	ILMN_189999	ILMN_189999	TRPV4	NM_022017.1	NM_022017.1		63873	11528501	NM_022017.1	Trpv4	NP_071300.1	ILMN_1239372	001690397	S	17	GATGAGGACACCCGGCATCTGTCTCGCAAGTTCAAGGACTGGGCCTATGG	5	-	115094921-115094939:115108351-115108381	5qF	Mus musculus transient receptor potential cation channel, subfamily V, member 4 (Trpv4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulated release of vasopressin from secretory granules into the blood [goid 30103] [evidence IMP]; The series of molecular signals initiated in response to osmotic change [goid 7231] [evidence IDA]; The series of molecular signals initiated in response to osmotic change [goid 7231] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IPI]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment [goid 42538] [evidence IMP]; Any process that modulates the rate or extent of the response to osmotic stress [goid 47484] [evidence IMP]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5034] [evidence IDA];  [goid 5034] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]	MGC150050; VROAC; 0610033B08Rik; VR-OAC; Trp12; OTRPC4; VRL-2	MGC150050; VROAC; 0610033B08Rik; VR-OAC; Trp12; OTRPC4; VRL-2
Mus musculus	RefSeq	ILMN_197893	ILMN_197893	LOC242497	XM_143836.3	XM_143836.3			38079235	XM_143836.3	LOC242497		ILMN_1258208	006020470	S	424	GAAAAGGTAGAGGGACGCCCGTTTCACTGCACATCCCTGGAGCTACTCGA										
Mus musculus	RefSeq	ILMN_213840	ILMN_213840	AGPAT3	NM_053014.3	NM_053014.3		28169	118131207	NM_053014.3	Agpat3	NP_443747.2	ILMN_1226540	000050324	S	3288	GCAGCGCTTCTGAGAGCAATAAAAACTACACTAGTAATGTGGGTGTGGGC	10	-	77735725-77735774	10qC1	Mus musculus 1-acylglycerol-3-phosphate O-acyltransferase 3 (Agpat3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IEA]	AW493985; D10Jhu12e; AW061257	AW493985; D10Jhu12e; AW061257
Mus musculus	RefSeq	ILMN_199730	ILMN_199730	LOC383884	XM_357309.1	XM_357309.1			38076609	XM_357309.1	LOC383884		ILMN_1241605	005260280	S	656	CATTCCGCCAAGCAGTTCTGACGCACACAAGAATGTGGAGGCCCATACAC										
Mus musculus	MEEBO	ILMN_221682	ILMN_221682	2700017A04RIK	scl43739.7_367	XM_127446.3			38075388	XM_127446.3	2700017A04Rik		ILMN_2738963	005490630	S	2096	ATTCTCTTGTGTGACTCTTGGTACAAATGTTGAGGGGTTTCTTTGGCTGA										
Mus musculus	RefSeq	ILMN_219532	ILMN_219532	PGCP	NM_176073.4	NM_176073.4		54381	147906423	NM_176073.4	Pgcp	NP_788262.1	ILMN_2710121	006110471	S	1383	CTGCAACCCCTCAATGTCACCAAGGTCTTTAGTAATGGAGAAGGAACTGA				15qB3.1	Mus musculus plasma glutamate carboxypeptidase (Pgcp), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Hls2; 2610034C17Rik; Lal-1; 1190003P12Rik	Hls2; 2610034C17Rik; Lal-1; 1190003P12Rik
Mus musculus	MEEBO	ILMN_219518	ILMN_219518	4921525O09RIK	scl44770.8.1_64				51767682	XM_488681	4921525O09Rik		ILMN_1222549	002850292	S	2953	TGAATTTGTACATTTTTAGATGGGTGACTGGCATACTTGTCTCCTTGGAG										
Mus musculus	MEEBO	ILMN_193240	ILMN_193240	SCL000449.1_2	scl000449.1_2	AK019491.1			12859732	AK019491.1	scl000449.1_2		ILMN_1250570	002360398	S	16	AGCACTGCAGAATCCACACCTAAGCCGGGGAAGACGGACACACGTCGGCT										
Mus musculus	MEEBO	ILMN_195607	ILMN_195607	PGM2L1	scl32319.17.234_75				28076968	NM_027629	Pgm2l1		ILMN_2517100	007570379	S	7	AGCCCATGGGGGAGCCTCTAAGTCACGAGTAAATTCTCAGTTCTCTACAG							The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: 3-phospho-D-glyceroyl phosphate + D-glucose 1-phosphate = 3-phospho-D-glycerate + D-glucose 1,6-bisphosphate [goid 47933] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220882	ILMN_220882	RIC8B	NM_183172.1	NM_183172.1		237422	34147208	NM_183172.1	Ric8b	NP_898995.1	ILMN_3060645	004220703	I	1590	CACTGGTCATTTAGAGGAACCAATGCCAAACCCTATAGATGAAATGACAG	10	+	84464539-84464588	10qC1	Mus musculus resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) (Ric8b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	BC051080; Ric-8; MGC58970	BC051080; Ric-8; MGC58970
Mus musculus	RefSeq	ILMN_220882	ILMN_220882	RIC8B	NM_183172.1	NM_183172.1		237422	34147208	NM_183172.1	Ric8b	NP_898995.1	ILMN_3138057	006330201	A	2895	TGTAGACAGCAGGCCAAGGTGATCAGTGGCTAAAGTTGAAAAGGGGTTGG	10	+	84479018-84479067	10qC1	Mus musculus resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) (Ric8b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	BC051080; Ric-8; MGC58970	BC051080; Ric-8; MGC58970
Mus musculus	RefSeq	ILMN_220882	ILMN_220882	RIC8B	NM_183172.1	NM_183172.1		237422	34147208	NM_183172.1	Ric8b	NP_898995.1	ILMN_2728107	006060189	S	2895	GTAGACAGCAGGCCAAGGTGATCAGTGGCTAAAGTTGAAAAGGGGTTGGT	10	+	84479018-84479067	10qC1	Mus musculus resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) (Ric8b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	BC051080; Ric-8; MGC58970	BC051080; Ric-8; MGC58970
Mus musculus	RefSeq	ILMN_223909	ILMN_252320	HAO1	NM_010403.2	NM_010403.2		15112	133893166	NM_010403.2	Hao1	NP_034533.1	ILMN_2771331	004290274	S	1733	CGTCTGAATATGTCTGGATGTTTTGTGGCACTCATTGCATTTGAAAGGGA	2	-	134323343-134323392	2qF2	Mus musculus hydroxyacid oxidase 1, liver (Hao1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The reactions of the C2 pathway bring about the metabolic conversion of two molecules of 2-phosphoglycolate to one molecule of 3-phosphoglycerate, which can be used by the C3 cycle, and one molecule of carbon dioxide (CO2) [goid 9854] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of the reaction: (S)-2-hydroxy-acid + O2 = 2-oxo acid + H2O2 [goid 3973] [evidence IDA]	GOX; MGC141211; Hao-1; Gox1	GOX; MGC141211; Hao-1; Gox1
Mus musculus	RefSeq	ILMN_220901	ILMN_220901	ACY3	NM_027857.3	NM_027857.3		71670	133893369	NM_027857.3	Acy3	NP_082133.2	ILMN_1240165	006290537	S	1274	GAGAAGCACGTGGCATTCCTGAAGTCTGAGAAGATCAGGGTCACAGTGCC	19	+	3989776-3989825	19qA	Mus musculus aspartoacylase (aminoacylase) 3 (Acy3), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid [goid 4046] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: N-acyl-L-aspartate + H2O = a fatty acid anion + L-aspartate [goid 19807] [evidence IEA]	Acy-3; HCBP1; AW107362; 0610006H10Rik	Acy-3; HCBP1; AW107362; 0610006H10Rik
Mus musculus	RefSeq	ILMN_196655	ILMN_313045	GSCL	XM_001480613.1	XM_001480613.1		195333	149267418	XM_001480613.1	Gscl	XP_001480663.1	ILMN_2525244	005220095	S	362	GGCGCCTAGAGCAGGCTCCCCGGCGCTGACTGGCACGAGCGGCCCCGGCC	16	-	17914607-17914656	16qA3	PREDICTED: Mus musculus goosecoid-like (Gscl), mRNA.					
Mus musculus	RefSeq	ILMN_218150	ILMN_218150	EMILIN3	NM_182840.1	NM_182840.1		280635	33469054	NM_182840.1	Emilin3	NP_878260.1	ILMN_2692258	007400500	S	3169	CCAGTTAGAGGAAAATCTCTCCCACCCACTATGGTCAGTACCGCTTGCCA	2	-	160732502-160732551	2qH2	Mus musculus elastin microfibril interfacer 3 (Emilin3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]			1110013O17Rik; EMILIN-T; Emilin5	1110013O17Rik; EMILIN-T; Emilin5
Mus musculus	RefSeq	ILMN_189242	ILMN_247940	AGBL4	NM_030231.2	NM_030231.2		78933	145386515	NM_030231.2	Agbl4	NP_084507.1	ILMN_2459565	004150128	S	844	CGTGTCCTACGAGAACATTTAGTCTTCAAGATTGCTCCAATGCTCAACCC					Mus musculus ATP/GTP binding protein-like 4 (Agbl4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	4930578N11Rik	4930578N11Rik
Mus musculus	RefSeq	ILMN_213866	ILMN_213866	SYK	NM_011518.2	NM_011518.2		20963	56550044	NM_011518.2	Syk	NP_035648.2	ILMN_1252460	005890671	S	4583	CCTCCCTAGAGGATTTAGACTATGAATGCCCACTAAATTTGCAAGGTCAG	13	+	52743641-52743690	13qA5	Mus musculus spleen tyrosine kinase (Syk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bound antigen receptor complex consisting in its basic form of an antigen-binding subunit (the membrane immunoglobulin or mIg), comprised of two identical heavy chains and two identical light chains held together by disulfide bonds, and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins [goid 19815] [evidence IDA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISO]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The process by which successful recombination of a T cell receptor beta chain into a translatable protein coding sequence leads to rescue from apoptosis and subsequent proliferation of an immature T cell [goid 43366] [evidence IGI]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of granulocyte macrophage colony-stimulating factor [goid 45425] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-3 [goid 45401] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation [goid 45588] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IGI]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IMP]; The regulated release of serotonin by a cell or group of cells. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells [goid 1820] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of mast cell degranulation [goid 43306] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4716] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]		
Mus musculus	RefSeq	ILMN_219979	ILMN_219979	GPBP1	NM_028487.2	NM_028487.2		73274	40254168	NM_028487.2	Gpbp1	NP_082763.2	ILMN_2856568	005390608	S	3249	GCTTCAGGAGGGGCTTGTCAGGAGCTTTGTTCGGTGTGCTGTCAGATCAG	13	-	112546681-112546730	13qD2.2	Mus musculus GC-rich promoter binding protein 1 (Gpbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	mGPBP; Gpbp; AU019836; D230035M11Rik; 1700034P14Rik	mGPBP; Gpbp; AU019836; D230035M11Rik; 1700034P14Rik
Mus musculus	RefSeq	ILMN_219979	ILMN_219979	GPBP1	NM_028487.2	NM_028487.2		73274	40254168	NM_028487.2	Gpbp1	NP_082763.2	ILMN_2856570	002230296	S	2960	GTTCAGGTCTTAAGGTACAAGGCAGCTTACAGTTTTGCTTGCAGAGTCCT	13	-	112546970-112547019	13qD2.2	Mus musculus GC-rich promoter binding protein 1 (Gpbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	mGPBP; Gpbp; AU019836; D230035M11Rik; 1700034P14Rik	mGPBP; Gpbp; AU019836; D230035M11Rik; 1700034P14Rik
Mus musculus	RefSeq	ILMN_220809	ILMN_220809	RPS6KC1	NM_178775.3	NM_178775.3		320119	52546980	NM_178775.3	Rps6kc1	NP_848890.2	ILMN_2727191	002750195	S	5189	GCTGCGGCTCTATCAAGAGGATCTTGAGAATACGAATTTACAGAGCAGAC	1	-	192620037-192620086	1qH6	Mus musculus ribosomal protein S6 kinase polypeptide 1 (Rps6kc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	B130003F20Rik; RPK118; C80612; AA682037	B130003F20Rik; RPK118; C80612; AA682037
Mus musculus	RefSeq	ILMN_184301	ILMN_220809	RPS6KC1	NM_178775.3	NM_178775.3		320119	52546980	NM_178775.3	Rps6kc1	NP_848890.2	ILMN_2417514	007100019	S	826	TAAGTTCAAGGCCCCCTTGGAGCCTGAGGAGCCCTGCCGAGGAGCTGAAG	1	-	192657914-192657963	1qH6	Mus musculus ribosomal protein S6 kinase polypeptide 1 (Rps6kc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	B130003F20Rik; RPK118; C80612; AA682037	B130003F20Rik; RPK118; C80612; AA682037
Mus musculus	MEEBO	ILMN_220921	ILMN_220921	C530043A13RIK	scl16623.1_313	NM_176897.2			31342340	NM_176897.2	C530043A13Rik		ILMN_1219900	004780608	S	3193	CCTGGGACCTTCCTCCCAGGCGGGAGCTCACTTAATCTGATCTAACCTAA										
Mus musculus	MEEBO	ILMN_194225	ILMN_194225	CDC23	scl51542.14.1_235				31341966	NM_178347	Cdc23		ILMN_1223168	003290259	S	14	ACGCTGACGTTAGCCTGCAGCACACTTCATACTGAGCTCATCCCTCAACT						A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200771	ILMN_320193	LOC100045198	XR_031412.1	XR_031412.1		100045198	149274352	XR_031412.1	LOC100045198		ILMN_1224397	001660022	S	691	CGGAGCATCAAAGGCAGAAATGTAGAGAACTTTCCAGGGAACTGGGGCAC					PREDICTED: Mus musculus similar to oocyte specific homeobox 5 (LOC100045198), misc RNA.					
Mus musculus	RefSeq	ILMN_200770	ILMN_320193	LOC100045198	XR_031412.1	XR_031412.1		100045198	149274352	XR_031412.1	LOC100045198		ILMN_2539939	004590021	S	1248	GTCAGCTTTCCTTCTCCTTTCAGCACAAGTATGTTCTCAGACCCGGAGTC					PREDICTED: Mus musculus similar to oocyte specific homeobox 5 (LOC100045198), misc RNA.					
Mus musculus	RefSeq	ILMN_217572	ILMN_250563	TBX2	NM_009324.2	NM_009324.2		21385	120407038	NM_009324.2	Tbx2	NP_033350.2	ILMN_2773918	000670367	S	2510	CCCTATCGCCCAGCGGCTCAGCCAAAGAGGCGGCCAGTGAACTGCAGAGC	11	+	85654398-85654447	11qC	Mus musculus T-box 2 (Tbx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into a muscle cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 7521] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_188883	ILMN_239350	UTP6	NM_144826.3	NM_144826.3		216987	141803270	NM_144826.3	Utp6	NP_659075.1	ILMN_2750789	002120451	S	3538	GCATCACATGCAGGAGGCAACGCCCTTGTCTGCACTGGGGATTACGTACT	11	-	79747741-79747790	11qB5	Mus musculus UTP6, small subunit (SSU) processome component, homolog (yeast) (Utp6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HCA66; MGC25509; RP23-253E9.3; 4732497O03Rik	HCA66; MGC25509; RP23-253E9.3; 4732497O03Rik
Mus musculus	RefSeq	ILMN_197849	ILMN_197849	LOC329967	XM_287394.1	XM_287394.1			28498448	XM_287394.1	LOC329967		ILMN_1216465	001090088	S	370	ACCGCCGGCCCCCTCGGTAGTCCAGGTACTGGGTTTGGATTAGGAATTGT										
Mus musculus	Riken	ILMN_204713	ILMN_204713	A530060J09RIK	ri|A530060J09|PX00142G06|AK041010|1086					AK041010	A530060J09Rik		ILMN_1234697	004670132	S	728	TGTGACCCAACAAGATGCTCCTCGCATTCCGCGGGTCCAGCCACTGCTGT										
Mus musculus	RefSeq	ILMN_216162	ILMN_237364	PCNP	NM_001024622.2	NM_001024622.2		76302	89994745	NM_001024622.2	Pcnp	NP_001019793.1	ILMN_2667983	007400327	S	2142	TTTGTTGAAATAACACCTCTCCTACATATTCTTTACTTGACTCGAATAAC	16	-	56015700-56015749	16qC1.1	Mus musculus PEST proteolytic signal containing nuclear protein (Pcnp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		AI647035; 1110018D06Rik	AI647035; 1110018D06Rik
Mus musculus	RefSeq	ILMN_204711	ILMN_237364	PCNP	NM_001024622.2	NM_001024622.2		76302	89994745	NM_001024622.2	Pcnp	NP_001019793.1	ILMN_1219572	001440162	S	1008	CGGACAGTCGGGTAACGAGGGAGAAGTCAGGAGAGGAACTGCTTCCAGTT	16	-	56016834-56016883	16qC1.1	Mus musculus PEST proteolytic signal containing nuclear protein (Pcnp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		AI647035; 1110018D06Rik	AI647035; 1110018D06Rik
Mus musculus	RefSeq	ILMN_216116	ILMN_216116	EXOSC4	NM_175399.4	NM_175399.4		109075	146198563	NM_175399.4	Exosc4	NP_780608.1	ILMN_2667551	006480092	S	1628	CAGGAGCACAAGGCCGAGGTTGCACTCAGCTGGCTATGGGTGTCCATCAT				15qD3	Mus musculus exosome component 4 (Exosc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [evidence IEA]	1500001N04Rik; Rrp41; 1110039I09Rik	1500001N04Rik; Rrp41; 1110039I09Rik
Mus musculus	RefSeq	ILMN_208764	ILMN_208764	TIPARP	NM_178892.5	NM_178892.5		99929	146198666	NM_178892.5	Tiparp	NP_849223.2	ILMN_2589291	006650767	S	3948	CCTCTTCTGCTTGGGAATGGAGGAAGTATATTACCTAGTTTTCAACTGTA				3qE1	Mus musculus TCDD-inducible poly(ADP-ribose) polymerase (Tiparp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PARP-7; PARP7; AW558171; DDF1	PARP-7; PARP7; AW558171; DDF1
Mus musculus	Riken	ILMN_203994	ILMN_203994	KITL	ri|A630048N03|PX00145F16|AK041961|675					AK041961	Kitl		ILMN_1251500	001300523	S	212	TGAGTAGGGCACGCCCGGGAGGAGCTCGGAAGCTTTCCAAGAAAATCGCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte differentiation [goid 2763] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of melanocyte differentiation [goid 45636] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186151	ILMN_186151	SCL000530.1_2	scl000530.1_2	AK048536.1			26339389	AK048536.1	scl000530.1_2		ILMN_1232642	003890367	S	18	ATGCCGAGCGCGCTTTGGCCTTGATCAACAGAATAACTGGTGCGGCCCCT										
Mus musculus	RefSeq	ILMN_215281	ILMN_215281	COPS3	NM_011991.1	NM_011991.1		26572	6753487	NM_011991.1	Cops3	NP_036121.1	ILMN_2657546	001980474	S	1347	TGGCCTGGCAAGTGTGAAGAGCGCAGCAGGAAGTACCATGCGGGTTCCAT	11	-	59631475-59631524	11qB1.3	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana) (Cops3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sgn3; Csn3	Sgn3; Csn3
Mus musculus	RefSeq	ILMN_196175	ILMN_249774	PHF15	NM_199299.3	NM_199299.3		76901	133892861	NM_199299.3	Phf15	NP_955003.2	ILMN_2522289	002480408	S	1746	GGGCAAGAAGAATGATTCAAAAAGGAAAGGCCGAGAGGGTCCCAAGGGCA	11	-	51632058-51632107	11qB1.3	Mus musculus PHD finger protein 15 (Phf15), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI480685; Jade2; mKIAA0239; 1200017K05Rik	AI480685; Jade2; mKIAA0239; 1200017K05Rik
Mus musculus	RefSeq	ILMN_196100	ILMN_249774	PHF15	NM_199299.3	NM_199299.3		76901	133892861	NM_199299.3	Phf15	NP_955003.2	ILMN_1225758	006110672	S	2454	TGCTAGATCCGATGCTGGGACAGGACTACCGTCTGCTGTGGCCGAGAGGC	11	-	51630554-51630603	11qB1.3	Mus musculus PHD finger protein 15 (Phf15), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI480685; Jade2; mKIAA0239; 1200017K05Rik	AI480685; Jade2; mKIAA0239; 1200017K05Rik
Mus musculus	RefSeq	ILMN_196100	ILMN_249774	PHF15	NM_199299.3	NM_199299.3		76901	133892861	NM_199299.3	Phf15	NP_955003.2	ILMN_2521620	004850138	S	2665	ACCCAGGCCCTGCCCTGGTCCCCCTACAAGGCCTCAGCCCAATCACAACT	11	-	51630343-51630392	11qB1.3	Mus musculus PHD finger protein 15 (Phf15), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI480685; Jade2; mKIAA0239; 1200017K05Rik	AI480685; Jade2; mKIAA0239; 1200017K05Rik
Mus musculus	RefSeq	ILMN_196100	ILMN_249774	PHF15	NM_199299.3	NM_199299.3		76901	133892861	NM_199299.3	Phf15	NP_955003.2	ILMN_1247555	001780368	S	2451	GGGTGCTAGATCCGATGCTGGGACAGGACTACCGTCTGCTGTGGCCGAGA	11	-	51630557-51630606	11qB1.3	Mus musculus PHD finger protein 15 (Phf15), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI480685; Jade2; mKIAA0239; 1200017K05Rik	AI480685; Jade2; mKIAA0239; 1200017K05Rik
Mus musculus	MEEBO	ILMN_215566	ILMN_215566	6430550D23RIK	scl0320095.1_48	XM_196284.3			38075210	XM_196284.3	6430550D23Rik		ILMN_1250064	007160431	S	931	GTGACAACGAGCTGAATGCTGGATTTTTAGTGTCACAACAGCCACATAAT										
Mus musculus	RefSeq	ILMN_218778	ILMN_218778	HEPACAM2	NM_178899.5	NM_178899.5		101202	146198560	NM_178899.5	Hepacam2	NP_849230.1	ILMN_2700050	005310356	S	1880	TGTTTGTGTCACAAAAAATTAAGGATGCTTAACACAGAGGTAAGACTGTG				6qA1	Mus musculus HEPACAM family member 2 (Hepacam2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_201256	ILMN_201256	LOC384988	XM_357973.1	XM_357973.1			38090190	XM_357973.1	LOC384988		ILMN_1225802	001090014	S	236	TAACTGGACCTGCTGGACGGGTCACTGCCATATGCTGTGGACTGGTATTC										
Mus musculus	RefSeq	ILMN_184466	ILMN_184466	UGT1A6A	NM_145079.2	NM_145079.2		94284	33186905	NM_145079.2	Ugt1a6a	NP_659545.2	ILMN_2418855	003370669	S	8	TCCCGGTGCCTCCCTGATGGGTCCTCTAAGAGAGTACAGGAACAACATGA	1	+	90031391-90031440	1qD	Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A6A (Ugt1a6a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glucuronate, any salt or ester of glucuronic acid, the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group [goid 19585] [evidence IDA]; The chemical reactions and pathways involving glucuronate, any salt or ester of glucuronic acid, the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group [goid 19585] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IDA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence ISO]	UGT1.6; Ugt1a6; Ugt1a7	UGT1.6; Ugt1a6; Ugt1a7
Mus musculus	RefSeq	ILMN_184466	ILMN_184466	UGT1A6A	NM_145079.2	NM_145079.2		94284	33186905	NM_145079.2	Ugt1a6a	NP_659545.2	ILMN_1212835	003800446	S	12	CCGACTTCCAGATTTCTTACTCTTGCTCAAGGGCCCTCATCACGTGCTAC	1	+	90031395-90031444	1qD	Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A6A (Ugt1a6a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glucuronate, any salt or ester of glucuronic acid, the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group [goid 19585] [evidence IDA]; The chemical reactions and pathways involving glucuronate, any salt or ester of glucuronic acid, the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group [goid 19585] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IDA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence ISO]	UGT1.6; Ugt1a6; Ugt1a7	UGT1.6; Ugt1a6; Ugt1a7
Mus musculus	RefSeq	ILMN_184466	ILMN_184466	UGT1A6A	NM_145079.2	NM_145079.2		94284	33186905	NM_145079.2	Ugt1a6a	NP_659545.2	ILMN_2795317	001170349	S	1958	CATCTGTGGTAATTTACAGAAGTCTGGCACTCTGCTTTCAGTGACAGCCC	1	+	90115233-90115282	1qD	Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A6A (Ugt1a6a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glucuronate, any salt or ester of glucuronic acid, the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group [goid 19585] [evidence IDA]; The chemical reactions and pathways involving glucuronate, any salt or ester of glucuronic acid, the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group [goid 19585] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IDA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence ISO]	UGT1.6; Ugt1a6; Ugt1a7	UGT1.6; Ugt1a6; Ugt1a7
Mus musculus	Riken	ILMN_202926	ILMN_202926	4732488H20RIK	ri|4732488H20|PX00052I16|AK029066|2635					AK029066	4732488H20Rik		ILMN_2553379	002230056	S	2580	GAAATCAGAGGACGTTTGCCATTGAAACAGGCTGATAAAGGCTTCTGTGC										
Mus musculus	MEEBO	ILMN_215577	ILMN_215577	1200007C13RIK	scl074119.1_88				51712729	XM_488968	1200007C13Rik		ILMN_2661226	004640682	S	2957	GAATTGAGAATGTAGTGTCCAGGAGGGTGCTGCCTGGGCGGTGGGCTGTA										
Mus musculus	RefSeq	ILMN_220603	ILMN_220603	GPX7	NM_024198.3	NM_024198.3		67305	142366038	NM_024198.3	Gpx7	NP_077160.1	ILMN_2724294	006280184	S	511	GACCCCACTGTGCCAGTGGCGGAGATCAAGCCCCGTATTACAGAGCAGGT	4	-	108073475-108073524	4qC7	Mus musculus glutathione peroxidase 7 (Gpx7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]	3110050F08Rik; GPX6; AI327032	3110050F08Rik; GPX6; AI327032
Mus musculus	RefSeq	ILMN_223949	ILMN_235783	SMAD9	NM_019483.4	NM_019483.4		55994	141802048	NM_019483.4	Smad9	NP_062356.3	ILMN_2772103	000830307	S	1114	CGACCCTTCCAATAACAGGAATAGGTTCTGCCTTGGGCTTCTCTCAAATG	3	+	54593232-54593281	3qC	Mus musculus MAD homolog 9 (Drosophila) (Smad9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	SMAD8B; MADH6; Smad8; SMAD8A; Madh9	SMAD8B; MADH6; Smad8; SMAD8A; Madh9
Mus musculus	RefSeq	ILMN_200433	ILMN_200433	LOC384283	XM_357542.1	XM_357542.1			38081901	XM_357542.1	LOC384283		ILMN_1257320	002260379	S	261	GCCAGATAAAGAGAGGCAAGTTGGTGCCAGCCAGAGCATTGATGGACGCG										
Mus musculus	RefSeq	ILMN_224139	ILMN_258141	SPRR2K	NM_011477.3	NM_011477.3		20765	133778909	NM_011477.3	Sprr2k	NP_035607.2	ILMN_1226200	006650368	S	384	CACCCCCCTTCCATGCGCTAGTGATATTCTCTGATTGGGAAGGAATTTCC	3	+	92237594-92237643	3qF1	Mus musculus small proline-rich protein 2K (Sprr2k), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence NAS]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223427	ILMN_223427	BMP4	NM_007554.2	NM_007554.2		12159	121949822	NM_007554.2	Bmp4	NP_031580.2	ILMN_1215252	005700044	S	1538	GGCCTGTTGTGTCCCCACTGAACTGAGTGCCATTTCCATGTTGTACCTGG	14	-	47003601-47003650	14qC1	Mus musculus bone morphogenetic protein 4 (Bmp4), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; Branching of the ureteric bud [goid 1658] [evidence IGI]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IDA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence ISO]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]; Process by which a cell becomes capable of differentiating autonomously into a mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 7500] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IDA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IDA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IDA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence ISO]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence ISO]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IDA]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IDA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence ISO]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence ISO]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IDA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IDA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IDA]; The regionalization process that creates areas within the forebrain that will direct the behavior of cell migration in differentiation as the telencephalon develops [goid 21978] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte differentiation [goid 32331] [evidence IDA]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISO]	Bmp2b1; Bmp2b-1; Bmp2b	Bmp2b1; Bmp2b-1; Bmp2b
Mus musculus	RefSeq	ILMN_190820	ILMN_223427	BMP4	NM_007554.2	NM_007554.2		12159	121949822	NM_007554.2	Bmp4	NP_031580.2	ILMN_1235698	001660187	S	173	TTCTCGTCTAAACCGTCTTGGAGCCTGCAGCGATCCAGTCTCTGGCCCTC	14	-	47010052-47010101	14qC1	Mus musculus bone morphogenetic protein 4 (Bmp4), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; Branching of the ureteric bud [goid 1658] [evidence IGI]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IDA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence ISO]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]; Process by which a cell becomes capable of differentiating autonomously into a mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 7500] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IDA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IDA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IDA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence ISO]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence ISO]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IDA]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IDA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence ISO]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence ISO]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IDA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IDA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IDA]; The regionalization process that creates areas within the forebrain that will direct the behavior of cell migration in differentiation as the telencephalon develops [goid 21978] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte differentiation [goid 32331] [evidence IDA]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISO]	Bmp2b1; Bmp2b-1; Bmp2b	Bmp2b1; Bmp2b-1; Bmp2b
Mus musculus	Riken	ILMN_201711	ILMN_201711	2310030D15RIK	ri|2310030D15|ZX00039L05|AK009540|517					AK009540	2310030D15Rik		ILMN_2543991	001570112	S	367	CCTGGTTGGGACTGTTAGACTTGTTACTTTCTAAAACCACTTGAGGCTTC										
Mus musculus	MEEBO	ILMN_218921	ILMN_218921	AW554918	scl0002202.1_16	XM_128912.3			38083403	XM_128912.3	AW554918		ILMN_2731415	006770563	S	1673	TTTTGTCAGACCAGTCAGCAGAAAGGAGGTCGCCTAGGGGTAGGATCTTT										
Mus musculus	MEEBO	ILMN_218921	ILMN_218921	AW554918	scl0002202.1_16	XM_128912.3			38083403	XM_128912.3	AW554918		ILMN_1234903	000780706	S	934	CTCGAGAGCTGGTTGCCGATAAAGAGTTTCCTAAACCTGATCTGGATATG										
Mus musculus	MEEBO	ILMN_195560	ILMN_195560	2310015N21RIK	scl49816.11_356				33859812	NM_181397	2310015N21Rik		ILMN_2516672	001410468	S	3	TATCAAACAATACTGGGATGTCTTCTGGGGTTTCACTTACTCTTTTCCCC										
Mus musculus	RefSeq	ILMN_189306	ILMN_259296	DPF1	NM_013874.2	NM_013874.2		29861	118130893	NM_013874.2	Dpf1	NP_038902.1	ILMN_2772803	001470678	S	1684	CCTGAATGGCGCCTCCCCACCTCATTTCTGGAGTTGCAATGGTCTCAACT	7	+	30102011-30102060	7qB1	Mus musculus D4, zinc and double PHD fingers family 1 (Dpf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189306	ILMN_259296	DPF1	NM_013874.2	NM_013874.2		29861	118130893	NM_013874.2	Dpf1	NP_038902.1	ILMN_1217506	004010347	S	1976	TTTTCCTTTCTCCCTTCCCACCCCTTTCCTTCCCTACCCAGCCAGGCTGG	7	+	30102303-30102352	7qB1	Mus musculus D4, zinc and double PHD fingers family 1 (Dpf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186465	ILMN_241892	2700062C07RIK	NM_026529.2	NM_026529.2		68046	31980906	NM_026529.2	2700062C07Rik	NP_080805.1	ILMN_2659861	003190093	S	27	ACGCGTCCGCGGACGCGTGGGTTTCGCAGCGTTTGAGCGACTGAGTTCTC	18	+	24613906-24613913:24613914-24613955	18qA2	Mus musculus RIKEN cDNA 2700062C07 gene (2700062C07Rik), mRNA.				AI195775; C87515; MGC103375	AI195775; C87515; MGC103375
Mus musculus	RefSeq	ILMN_241892	ILMN_241892	2700062C07RIK	NM_026529.2	NM_026529.2		68046	31980906	NM_026529.2	2700062C07Rik	NP_080805.1	ILMN_2847285	004250575	S	836	CACCCTTCAGTGCTGTGGGAAGTGCCTCATTAAACCAAGCCTCCTCGGCC	18	+	24620580-24620629	18qA2	Mus musculus RIKEN cDNA 2700062C07 gene (2700062C07Rik), mRNA.				AI195775; C87515; MGC103375	AI195775; C87515; MGC103375
Mus musculus	RefSeq	ILMN_192659	ILMN_192659	V1RC14	NM_134169.1	NM_134169.1		171187	21717666	NM_134169.1	V1rc14	NP_598930.1	ILMN_2490145	001110767	S	851	ATAACCGAATAAACATTATGATAAAAAATATGCAAAAAGTATGCCACCAG	6	-	66561662-66561711	6qC1	Mus musculus vomeronasal 1 receptor, C14 (V1rc14), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193704	ILMN_193704	1110067D22RIK	scl40467.5_360				29611653	NM_173752	1110067D22Rik		ILMN_1252881	003420328	S	20	CATAGACCATGTGCTTAATAGTGGTCCCTTTATCTCACATACTATAAGAC								Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215548	ILMN_215548	KLHL7	NM_026448.2	NM_026448.2		52323	141802726	NM_026448.2	Klhl7	NP_080724.1	ILMN_2660864	003140402	S	2573	CTCAGCAGTGTAAAAAGCACTCTATGTCCTCATTCTCTATGCGAGAGCCA	5	+	23666215-23666264	5qA3	Mus musculus kelch-like 7 (Drosophila) (Klhl7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2700038B03Rik; D5Ertd363e; Klhl6; SBBI26	2700038B03Rik; D5Ertd363e; Klhl6; SBBI26
Mus musculus	RefSeq	ILMN_227818	ILMN_227818	STARD3	NM_021547.1	NM_021547.1		59045	10946983	NM_021547.1	Stard3	NP_067522.1	ILMN_2892310	006760719	S	1917	GACCCTATTCCATACACATCGTGGGGATACAAGGCAGGGGACGGCACTGC	11	+	98197052-98197101	11qD	Mus musculus START domain containing 3 (Stard3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence IEA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]	es64; Mln64	es64; Mln64
Mus musculus	Riken	ILMN_205698	ILMN_205698	5830433M19RIK	ri|B430219F03|PX00071D16|AK046647|2054					AK046647	5830433M19Rik		ILMN_1259049	004280678	S	1982	CCAGCTCCAGGAGATCTGACATCATCTTATAGCCTCTGTAGGCATCCTGC										
Mus musculus	RefSeq	ILMN_217806	ILMN_217806	D0HXS9928E	NM_138607.1	NM_138607.1		108160	20070431	NM_138607.1	D0HXS9928E	NP_613073.1	ILMN_2856628	005090537	S	956	TCCCCCATCATCACAGCTTCTATGACTTCATCGTTACCAAGGCACGAGGA	X	+	70571583-70571589:70571770-70571812	XqA7.3	Mus musculus DNA segment, human DXS9928E (D0HXS9928E), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			XAP-5	XAP-5
Mus musculus	RefSeq	ILMN_199409	ILMN_199409	OLFR491	NM_146736.1	NM_146736.1		258731	22129372	NM_146736.1	Olfr491	NP_666947.1	ILMN_1216010	006330653	S	413	CCCAAATCTGTCTCCTCTTAGTTGGGGCATCCTATGTGGGTGGCTGTGTG	7	+	115460822-115460871	7qE3	Mus musculus olfactory receptor 491 (Olfr491), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-11	MOR204-11
Mus musculus	RefSeq	ILMN_199409	ILMN_199409	OLFR491	NM_146736.1	NM_146736.1		258731	22129372	NM_146736.1	Olfr491	NP_666947.1	ILMN_2665697	000460687	S	776	ATGTGATGCCCAAGTCCAGCTACTCAACTAAGCAGAACAGGGTGGTGTCT	7	+	115461185-115461234	7qE3	Mus musculus olfactory receptor 491 (Olfr491), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-11	MOR204-11
Mus musculus	RefSeq	ILMN_199409	ILMN_199409	OLFR491	NM_146736.1	NM_146736.1		258731	22129372	NM_146736.1	Olfr491	NP_666947.1	ILMN_2841061	000610703	S	871	AGTTTGAGGAACAGAGATGTTAAGGAAGCGCTGAGGAAGGCAACTCTTAG	7	+	115461280-115461329	7qE3	Mus musculus olfactory receptor 491 (Olfr491), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-11	MOR204-11
Mus musculus	Riken	ILMN_205652	ILMN_205652	GPR64, GPCR	ri|A530097H16|PX00143F10|AK041291|3421					AK041291	GPR64, GPCR		ILMN_2574216	001410008	S	212	GGAGCTCGTGACCAGACTAGCCAACATAGCAAGACCTAGTACCCATCCCC										
Mus musculus	RefSeq	ILMN_209591	ILMN_209591	OMD	NM_012050.1	NM_012050.1		27047	6754933	NM_012050.1	Omd	NP_036180.1	ILMN_1238597	003460008	S	1435	CCATGACAGTCAGGACAACACTCTTGAGGGTCAAGAAGTATCAGATGAGC	13	+	49687664-49687713	13qA5	Mus musculus osteomodulin (Omd), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	OSAD; SLRR2C	OSAD; SLRR2C
Mus musculus	RefSeq	ILMN_187722	ILMN_243797	TNFRSF4	NM_011659.2	NM_011659.2		22163	118130086	NM_011659.2	Tnfrsf4	NP_035789.1	ILMN_2446559	002000747	S	985	TGGCCAAGATCTGAGCATTACTACAGGAGTGGATTTTATGGGGCACGGAC	4	+	155390528-155390541:155390542-155390577	4qE2	Mus musculus tumor necrosis factor receptor superfamily, member 4 (Tnfrsf4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A defense response that is mediated by cells [goid 6968] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IPI]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence IPI]	Txgp1; CD134; Ox40; Ly-70; TXGP1L; ACT35	Txgp1; CD134; Ox40; Ly-70; TXGP1L; ACT35
Mus musculus	RefSeq	ILMN_185032	ILMN_256133	ELAC1	NM_053255.3	NM_053255.3		114615	111074536	NM_053255.3	Elac1	NP_444485.2	ILMN_1227624	000110189	S	2246	GACGCTGCACTGCCAAGCAGCCTGGGTGATTCTCAAAGACATGAGTATTG	18	-	73897367-73897416	18qE2	Mus musculus elaC homolog 1 (E. coli) (Elac1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610018O07Rik; 8430417G19Rik	2610018O07Rik; 8430417G19Rik
Mus musculus	RefSeq	ILMN_193521	ILMN_256133	ELAC1	NM_053255.3	NM_053255.3		114615	111074536	NM_053255.3	Elac1	NP_444485.2	ILMN_2497945	001030445	S	4769	GTACTTTGCTCAGCCCGTCAACCCGTCTTTTTGATACTTGTCGGTCACAG	18	-	73894844-73894893	18qE2	Mus musculus elaC homolog 1 (E. coli) (Elac1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610018O07Rik; 8430417G19Rik	2610018O07Rik; 8430417G19Rik
Mus musculus	RefSeq	ILMN_216408	ILMN_216408	1110008F13RIK	NM_026124.2	NM_026124.2		67388	141803233	NM_026124.2	1110008F13Rik	NP_080400.1	ILMN_1252407	004670044	S	714	TCCGCAAGGGTTGTGAAACTTTTCAAAGAACCATCCGCCTTTGGGGAAGC	2	+	156698968-156699017	2qH1	Mus musculus RIKEN cDNA 1110008F13 gene (1110008F13Rik), mRNA.				AI316789; RP24-482A24.5	AI316789; RP24-482A24.5
Mus musculus	Riken	ILMN_203468	ILMN_203468	4932408C11RIK	ri|4932408C11|PX00017I07|AK029932|3463					AK029932	4932408C11Rik		ILMN_1214466	004780451	S	3005	CTGGTCTTCCGCTGTGCACTGTCCTTAGATGCATGCCTTGTTACCTCGTG										
Mus musculus	RefSeq	ILMN_200814	ILMN_310726	LOC100039346	XM_001472500.1	XM_001472500.1		100039346	149271639	XM_001472500.1	LOC100039346	XP_001472550.1	ILMN_1248914	002120669	S	5	CATGGGCTCCTAAATGCCCTTCATCAGCAGATGCTTGGAGTTTTCCTCTG	X	+	53700489-53700538	XqA5	PREDICTED: Mus musculus hypothetical protein LOC100039346 (LOC100039346), mRNA.					
Mus musculus	RefSeq	ILMN_218205	ILMN_310726	LOC100039346	XM_001472500.1	XM_001472500.1		100039346	149271639	XM_001472500.1	LOC100039346	XP_001472550.1	ILMN_1225930	004850519	S	468	GGCATGACAAACAGTACAAGAAAGCCCACTTGGGCACAGCCCTGAAGGCC	X	+	53701470-53701519	XqA5	PREDICTED: Mus musculus hypothetical protein LOC100039346 (LOC100039346), mRNA.					
Mus musculus	RefSeq	ILMN_192727	ILMN_230150	LOC672342	XM_992776.1	XM_992776.1		672342	94378738	XM_992776.1	LOC672342	XP_997870.1	ILMN_2490758	001070356	S	69	TGAGTGCCTCAGTCATAATGTCCAGGGGACAAATTGTTCTCACCCAGTCT					PREDICTED: Mus musculus similar to Ig kappa chain V-IV region S107B precursor (LOC672342), mRNA.					
Mus musculus	RefSeq	ILMN_193506	ILMN_242680	COX7B	NM_025379.2	NM_025379.2		66142	70909318	NM_025379.2	Cox7b	NP_079655.1	ILMN_2671689	000940692	S	369	CAGTAGTCGTGCCAGCTGGTACAATAATCAAGGAATTGTTTAAAACCAAC	X	+	103217157-103217162:103217163-103217206	XqD	Mus musculus cytochrome c oxidase subunit VIIb (Cox7b), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]	1100001F07Rik; MGC107263; C80563; 1110004F07Rik	1100001F07Rik; MGC107263; C80563; 1110004F07Rik
Mus musculus	RefSeq	ILMN_217832	ILMN_222048	DDX19B	NM_172284.4	NM_172284.4		234733	146149235	NM_172284.4	Ddx19b	NP_758488.1	ILMN_2688135	003610482	S	6437	ATATGGCTAGTGAGATGACTGGTTATTGCAGTCCAGTTCCTAAAGGTAGG				8qE1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b (Ddx19b), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	4921519L13Rik; AW260119; 2810457M08Rik	4921519L13Rik; AW260119; 2810457M08Rik
Mus musculus	RefSeq	ILMN_222048	ILMN_222048	DDX19B	NM_172284.4	NM_172284.4		234733	146149235	NM_172284.4	Ddx19b	NP_758488.1	ILMN_1236406	003840452	S	2927	ATAGACCTGTGTTCCCATATCTTAAGGCCAGTTCCGTCCCCTGGGAAAGG				8qE1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b (Ddx19b), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	4921519L13Rik; AW260119; 2810457M08Rik	4921519L13Rik; AW260119; 2810457M08Rik
Mus musculus	MEEBO	ILMN_194020	ILMN_194020	MJ-2000-95_706	MJ-2000-95_706						MJ-2000-95_706		ILMN_2502605	004050674	S	2	GTGTGGTAGAGGAGTAGCAATGAGAGCTAAAGGCTTAGGAGCAGAGGTCG										
Mus musculus	RefSeq	ILMN_209015	ILMN_209015	2310008H09RIK	NM_023197.1	NM_023197.1		66356	12963566	NM_023197.1	2310008H09Rik	NP_075686.1	ILMN_2699624	000650164	S	1737	AAGCTTATGGGTGGCTTTAAGCATCTGTCCCCGTCATTCAGCCGCCCTCC	7	-	125989476-125989525	7qF2	Mus musculus RIKEN cDNA 2310008H09 gene (2310008H09Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Tsg118	Tsg118
Mus musculus	RefSeq	ILMN_209015	ILMN_209015	2310008H09RIK	NM_023197.1	NM_023197.1		66356	12963566	NM_023197.1	2310008H09Rik	NP_075686.1	ILMN_1225520	006020747	S	1916	CTCTGAGGCCCGAAAGGTCTTCTACATTGACCGGAATGCCTCCAAGTCTA	7	-	125989297-125989346	7qF2	Mus musculus RIKEN cDNA 2310008H09 gene (2310008H09Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Tsg118	Tsg118
Mus musculus	MEEBO	ILMN_195590	ILMN_195590	BC006779	scl18209.11_224				51706549	XM_485132	BC006779		ILMN_1226639	006420170	S	4	CCTGGCACCATCATCCTTTTCTACTGGACTAAGCAGGTGAAATCTCTCCC								Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195088	ILMN_195088	SCL00381712.1_66	scl00381712.1_66	AK089394.1			26354473	AK089394.1	scl00381712.1_66		ILMN_1259756	003420348	S	1	AGAGATCCGAGCCGGCTGATCTGCCTCTTCGCACTGTCCCTGCGTCCGTG										
Mus musculus	RefSeq	ILMN_196675	ILMN_260684	CCDC114	NM_001033243.2	NM_001033243.2		211535	142371876	NM_001033243.2	Ccdc114	NP_001028415.1	ILMN_1231387	001410010	S	2382	GTCTCCTAACTGGATTGCCCTCCATTGACTAGGTGAACTGTAACTATAGG	7	+	53204255-53204304	7qB4	Mus musculus coiled-coil domain containing 114 (Ccdc114), mRNA. XM_925312					
Mus musculus	RefSeq	ILMN_221645	ILMN_221645	RPS6KA6	NM_025949.2	NM_025949.2		67071	67625732	NM_025949.2	Rps6ka6	NP_080225.2	ILMN_1224495	003800673	S	3829	CAATATTAATGGTTGACACAGAAATTTGAGTACATTTAAAAATCATTTAT	X	-	108502236-108502285	XqE1	Mus musculus ribosomal protein S6 kinase polypeptide 6 (Rps6ka6), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2610524K04Rik; RSK4	2610524K04Rik; RSK4
Mus musculus	RefSeq	ILMN_211498	ILMN_211498	9130019P16RIK	NM_198118.1	NM_198118.1		378878	37674272	NM_198118.1	9130019P16Rik	NP_932786.1	ILMN_2616448	005310301	S	4102	GGCACTGGCCTCGACACACATTGGATGCTGACCTACTCTTGCCTATAAGG	6	-	54199593-54199642		Mus musculus RIKEN cDNA 9130019P16 gene (9130019P16Rik), mRNA.				6430501H15Rik	6430501H15Rik
Mus musculus	RefSeq	ILMN_196612	ILMN_196612	E130006D01RIK	NM_207252.1	NM_207252.1			46402256	NM_207252.1	E130006D01Rik		ILMN_2525018	001190541	S	418	GCTGCCTTCTTGGCCTGTCACAGAATTAAATGGCAAAGGGTTCCGAGGAC										
Mus musculus	RefSeq	ILMN_196612	ILMN_196612	E130006D01RIK	NM_207252.1	NM_207252.1			46402256	NM_207252.1	E130006D01Rik		ILMN_2742252	003130647	S	847	CCAGGAGCTCTCTGGTCTCCTATAAATAAAGGATAACACATTCGGCCTTC										
Mus musculus	RefSeq	ILMN_185176	ILMN_185176	ZIK1	NM_009577.3	NM_009577.3		22775	113374193	NM_009577.3	Zik1	NP_033603.2	ILMN_2424828	001770437	S	3662	CAGTAATTAAGTATATGTGAATGCTTCTATTTTTAAGAAAGTGTCAAACT	7	-	11073052-11073101	7qA1	Mus musculus zinc finger protein interacting with K protein 1 (Zik1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185871	ILMN_317050	2410002O22RIK	NM_001093759.1	NM_001093759.1		66975	148276984	NM_001093759.1	2410002O22Rik	NP_001087228.1	ILMN_2697092	002710730	S	2211	ACATACCAACACACGTTAACAGACACTCGAGAGCAGGCCAGGATTGACTG				13qD1	Mus musculus RIKEN cDNA 2410002O22 gene (2410002O22Rik), transcript variant 2, mRNA.				2610524F24Rik; AU017229; AI451892	2610524F24Rik; AU017229; AI451892
Mus musculus	RefSeq	ILMN_186733	ILMN_225126	LOC630470	XM_903846.2	XM_903846.2		630470	94397528	XM_903846.2	LOC630470	XP_908939.1	ILMN_1256700	001510725	S	331	GTGTCGTCCCTATAAAGGATGAACTGGAAGGATCTGTCTGGCCTTTTGCG	14	-	54557698-54557747		PREDICTED: Mus musculus similar to TRDV5, transcript variant 2 (LOC630470), mRNA.					
Mus musculus	RefSeq	ILMN_210682	ILMN_210682	FCRL1	NM_178165.2	NM_178165.2		229499	31342607	NM_178165.2	Fcrl1	NP_835459.1	ILMN_2608151	002490066	S	499	TTTATCATGAGAGCATCATCCTGGGGAACAGTTCAGCACCCTCTGGAGGA	3	+	87471081-87471130	3qF1	Mus musculus Fc receptor-like 1 (Fcrl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	A230020G22Rik; FcRH1S; Fcrh1; mBXMH1b; moFcRH1S; FcRH1L; IFGP1; moFcRH1L; BXMAS1; BXMAS1-like	A230020G22Rik; FcRH1S; Fcrh1; mBXMH1b; moFcRH1S; FcRH1L; IFGP1; moFcRH1L; BXMAS1; BXMAS1-like
Mus musculus	RefSeq	ILMN_216967	ILMN_216967	D630003M21RIK	NM_177657.3	NM_177657.3		228846	142387782	NM_177657.3	D630003M21Rik	NP_808325.1	ILMN_2677541	007200377	S	3338	AAGGGTCAGGGTCTGCCTAGAGAAGTGGGTTCCAAATGGGACAGGTCTCT	2	-	158022009-158022058	2qH1	Mus musculus RIKEN cDNA D630003M21 gene (D630003M21Rik), transcript variant 1, mRNA.					
Mus musculus	RefSeq	ILMN_223719	ILMN_223719	PSMA5	NM_011967.2	NM_011967.2		26442	110625642	NM_011967.2	Psma5	NP_036097.1	ILMN_2962606	002970209	S	1080	GAAGGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCC				3qF3	Mus musculus proteasome (prosome, macropain) subunit, alpha type 5 (Psma5), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	ZETA; MGC118067; MGC102091	ZETA; MGC118067; MGC102091
Mus musculus	RefSeq	ILMN_216149	ILMN_216149	MAPRE3	NM_133350.1	NM_133350.1		100732	39930508	NM_133350.1	Mapre3	NP_579928.1	ILMN_1232412	006620608	S	1526	TTTGTCTTTTGACTTCTCTCTCAGTAGATGAGGGAAAGGCTGATATGAGG	5	+	31168099-31168148	5qB1	Mus musculus microtubule-associated protein, RP/EB family, member 3 (Mapre3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]	AI790651; EB2	AI790651; EB2
Mus musculus	RefSeq	ILMN_206397	ILMN_245227	MTAP6	NM_001048167.1	NM_001048167.1		17760	114520591	NM_001048167.1	Mtap6	NP_001041632.1	ILMN_1226502	005490228	S	2522	CTGGCTGTGCCCTTCCTGTGGGTCTGGGTTGGGTCAGGTCTTAGTTACTG	7	+	106466422-106466471	7qE2	Mus musculus microtubule-associated protein 6 (Mtap6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	STOP; 2810411E12Rik	STOP; 2810411E12Rik
Mus musculus	RefSeq	ILMN_186890	ILMN_245227	MTAP6	NM_001048167.1	NM_001048167.1		17760	114520591	NM_001048167.1	Mtap6	NP_001041632.1	ILMN_2439378	005670598	S	4472	ACTGACCGTGGTTCCTCAAGCAATGTTTGGTGTCACCTCTCTGCAGGTGA	7	+	106468372-106468421	7qE2	Mus musculus microtubule-associated protein 6 (Mtap6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	STOP; 2810411E12Rik	STOP; 2810411E12Rik
Mus musculus	RefSeq	ILMN_245227	ILMN_245227	MTAP6	NM_001048167.1	NM_001048167.1		17760	114520591	NM_001048167.1	Mtap6	NP_001041632.1	ILMN_3108372	000060634	A	1813	CCCTCAACAGGCAAATCCGGGAGGAGGTGGCGAGTACAGTAAGCAGCTCT	7	+	106417769-106417818	7qE2	Mus musculus microtubule-associated protein 6 (Mtap6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	STOP; 2810411E12Rik	STOP; 2810411E12Rik
Mus musculus	RefSeq	ILMN_213602	ILMN_213602	CCR2	NM_009915.1	NM_009915.1		12772	6753465	NM_009915.1	Ccr2	NP_034045.1	ILMN_1226563	006940259	S	2941	AATTCTGACTTTGAGCTTATGAACTAACATAGACAGCTCAGGATTAACAG	9	+	124023231-124023280	9qF4	Mus musculus chemokine (C-C motif) receptor 2 (Ccr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; An immune response mediated through a body fluid [goid 6959] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; A defense response that is mediated by cells [goid 6968] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 19955] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IDA]	CC-CKR-2; CCR2A; CKR2; CKR2A; Cmkbr2; CCR2B; mJE-R; CKR2B	CC-CKR-2; CCR2A; CKR2; CKR2A; Cmkbr2; CCR2B; mJE-R; CKR2B
Mus musculus	RefSeq	ILMN_197398	ILMN_197398	LOC238943	XM_138902.2	XM_138902.2			38075578	XM_138902.2	LOC238943		ILMN_1244211	001010131	S	864	CCCCTTTGACCAGGACGACTGGGGCGCCTGCTAGAAGAAGCAGGCAGCTT										
Mus musculus	MEEBO	ILMN_215604	ILMN_215604	MNAT1	scl017420.8_104	NM_008612.1			6678905	NM_008612.1	Mnat1		ILMN_2758631	001050059	S	780	TGCAGCTCGAGAAGCCCAGATCCATGAAGCCAGTGACGTTTTCCACAGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the activity of an enzyme [goid 50790] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process whose specific outcome is the progression of the brain ventricular system over time, from its formation to the mature structure. The brain ventricular system consists of four communicating cavities within the brain that are continuous with the central canal of the spinal cord. These cavities include two lateral ventricles, the third ventricle and the fourth ventricle. Cerebrospinal fluid fills the ventricles and is produced by the choroid plexus [goid 21591] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; The chemical reactions and pathways in multicellular organisms that occur at the tissue, organ, or organismal level. These processes, unlike cellular metabolism, can include transport of substances between cells when that transport is required [goid 44236] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_185138	ILMN_185138	WDFY3	scl26310.17.1_108				39930598	NM_172882	Wdfy3		ILMN_2424487	007400592	S	20	GTCTTTCATGGGCTTAGTAGATATTTAATGTGGACAAACCACAACCAAAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 44444] [evidence ISA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence ISA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IDA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence ISO]		
Mus musculus	RefSeq	ILMN_210940	ILMN_210940	CD79B	NM_008339.1	NM_008339.1		15985	6680374	NM_008339.1	Cd79b	NP_032365.1	ILMN_2610822	002060373	S	1080	CTGGGGATAGACTTGACCCAAGGCTTCTGGGAGTGCCATGTGGGATCTGT	11	-	106172864-106172913	11qE1	Mus musculus CD79B antigen (Cd79b), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bound antigen receptor complex consisting in its basic form of an antigen-binding subunit (the membrane immunoglobulin or mIg), comprised of two identical heavy chains and two identical light chains held together by disulfide bonds, and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins [goid 19815] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ig-beta; B29; Igb; Igbeta	Ig-beta; B29; Igb; Igbeta
Mus musculus	RefSeq	ILMN_210940	ILMN_210940	CD79B	NM_008339.1	NM_008339.1		15985	6680374	NM_008339.1	Cd79b	NP_032365.1	ILMN_2661523	002060543	S	475	CCAGAATGGCTCTGTCTACACCCTCACTATCCAAAACATCCAGTACGAGG	11	-	106174035-106174084	11qE1	Mus musculus CD79B antigen (Cd79b), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bound antigen receptor complex consisting in its basic form of an antigen-binding subunit (the membrane immunoglobulin or mIg), comprised of two identical heavy chains and two identical light chains held together by disulfide bonds, and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins [goid 19815] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ig-beta; B29; Igb; Igbeta	Ig-beta; B29; Igb; Igbeta
Mus musculus	MEEBO	ILMN_221718	ILMN_221718	A330035P11RIK	scl00319727.1_69	NM_176990.2			31342536	NM_176990.2	A330035P11Rik		ILMN_1226697	001820202	S	335	CCCGAGACCTGACAGCCTCAACACTCTGGGTAAAGTAAATTAAAAACCCG										
Mus musculus	MEEBO	ILMN_221718	ILMN_221718	A330035P11RIK	scl00319727.1_69	NM_176990.2			31342536	NM_176990.2	A330035P11Rik		ILMN_1224881	003780487	S	858	CCCTTTTGGGTCCCCAAACAGGAATTCCTCATCAATATTCAGTAAGAAGC										
Mus musculus	RefSeq	ILMN_197882	ILMN_197882	LOC242805	XM_144122.2	XM_144122.2			38079120	XM_144122.2	LOC242805		ILMN_2529693	004060215	S	481	GTGAAAGATGTAAGAGGCTGGACTGCAGCACACTGGGCAGCGGCTTGTGG										
Mus musculus	RefSeq	ILMN_199963	ILMN_199963	LOC381596	XM_358629.1	XM_358629.1			38079249	XM_358629.1	LOC381596		ILMN_1237619	001850278	S	971	GAGATGCTGGAGGGCCGAAGATGAATCAAGTCAGCGAAAGTTCCACGGTC										
Mus musculus	RefSeq	ILMN_222477	ILMN_222477	CMTM5	NM_026066.2	NM_026066.2		67272	142365114	NM_026066.2	Cmtm5	NP_080342.1	ILMN_1231274	006960605	S	575	CCTGGTCTCCGTCTTTGCCTATGATGCATTCAAGATCTACCGAACTGAGC	14	+	55557703-55557752	14qC3	Mus musculus CKLF-like MARVEL transmembrane domain containing 5 (Cmtm5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	2900052H21Rik; Cklfsf5; 1500005P16Rik	2900052H21Rik; Cklfsf5; 1500005P16Rik
Mus musculus	Riken	ILMN_206282	ILMN_206282	A030010G24RIK	ri|A030010G24|PX00316O01|AK079467|2425					AK079467	A030010G24Rik		ILMN_2578953	004060601	S	1848	CATGTGCAATGTCTAGGGGAGGGCACAGAAGATAACATCAGATTCCCTGG										
Mus musculus	RefSeq	ILMN_211112	ILMN_211112	PCOLCE2	NM_029620.2	NM_029620.2		76477	84794576	NM_029620.2	Pcolce2	NP_083896.1	ILMN_1238603	001230575	S	1366	TAAGAATCAGAAGCCCATGAACGCACTGAAGAACAAGCAGTGTTAGCCTG	9	+	95595470-95595515:95595516-95595519	9qE3.3	Mus musculus procollagen C-endopeptidase enhancer 2 (Pcolce2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcpe2; 2400001O18Rik	Pcpe2; 2400001O18Rik
Mus musculus	RefSeq	ILMN_211112	ILMN_211112	PCOLCE2	NM_029620.2	NM_029620.2		76477	84794576	NM_029620.2	Pcolce2	NP_083896.1	ILMN_2678421	001400402	S	263	GGCGGCATTCTTACCGGAGAGTCTGGATTTATTGGCAGTGAAGGTTTTCC	9	+	95539087-95539136	9qE3.3	Mus musculus procollagen C-endopeptidase enhancer 2 (Pcolce2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcpe2; 2400001O18Rik	Pcpe2; 2400001O18Rik
Mus musculus	MEEBO	ILMN_192690	ILMN_192690	SCL0001221.1_0	scl0001221.1_0	AK035604.1			26330783	AK035604.1	scl0001221.1_0		ILMN_1241897	006550615	S	4	CAGGATCCAAAGGAGGCCAGACAAGAGCACTGAATCTCCTGGCACTGGAG										
Mus musculus	RefSeq	ILMN_210543	ILMN_210543	CARD10	NM_130859.2	NM_130859.2		105844	40538833	NM_130859.2	Card10	NP_570929.1	ILMN_2748716	001690598	S	101	AATGACCCCGAAGGCACCGCCCCGTCGCGCCTCCGGAGCCGTCGGCCGAG	15	-	78633322-78633371	15qE1	Mus musculus caspase recruitment domain family, member 10 (Card10), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	AI449026; CARMA3; Bimp1	AI449026; CARMA3; Bimp1
Mus musculus	RefSeq	ILMN_210543	ILMN_210543	CARD10	NM_130859.2	NM_130859.2		105844	40538833	NM_130859.2	Card10	NP_570929.1	ILMN_2606660	007330196	S	4430	GTGTGTGCTGTCATGAAGATACCACGGCTGTTCTGGTCAGCTCCTACCCT	15	-	78605814-78605863	15qE1	Mus musculus caspase recruitment domain family, member 10 (Card10), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	AI449026; CARMA3; Bimp1	AI449026; CARMA3; Bimp1
Mus musculus	RefSeq	ILMN_200384	ILMN_200384	LOC386382	XM_359196.1	XM_359196.1			38081484	XM_359196.1	LOC386382		ILMN_2538569	004010167	S	634	GCCCAGGCCTCCATAGTATCCGCCATAGTAACACATGGTGTTACAGCCTT										
Mus musculus	RefSeq	ILMN_200250	ILMN_200250	LOC386069	XM_359053.1	XM_359053.1			38081089	XM_359053.1	LOC386069		ILMN_1219530	005090110	S	861	TCCACTAATCAGACTAATCACGGGAGACACAATCCATCCCCTGAATGCTG										
Mus musculus	RefSeq	ILMN_211591	ILMN_211591	CLPTM1	NM_019649.2	NM_019649.2		56457	103472024	NM_019649.2	Clptm1	NP_062623.2	ILMN_2617425	002810114	S	2009	AAAAAGGATTAGCCACTGCAGTCCTCCTTATCTGCTCCTGGTGACTGACC	7	-	20219001-20219039:20219040-20219050	7qA3	Mus musculus cleft lip and palate associated transmembrane protein 1 (Clptm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of T cell differentiation in the thymus [goid 33081] [evidence IMP]		N14	N14
Mus musculus	Riken	ILMN_201786	ILMN_201786	2310041I20RIK	ri|2310041I20|ZX00054L13|AK009738|355					AK009738	2310041I20Rik		ILMN_1258355	001050228	S	35	GCGGCTGCCAGCCACCAACTCCAAATCTCCCTAGCTCACTGGTGAGCCCT										
Mus musculus	RefSeq	ILMN_216005	ILMN_216005	HEMK1	NM_133984.1	NM_133984.1		69536	21539656	NM_133984.1	Hemk1	NP_598745.1	ILMN_2666272	000630706	S	1292	CCTGGCACGGCCATGGTCCTGTGATTCCCCATGATGGATGTTTCTAGGAG	9	-	107230210-107230259	9qF1	Mus musculus HemK methyltransferase family member 1 (Hemk1), mRNA.		The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AW049265; 2310008M14Rik	AW049265; 2310008M14Rik
Mus musculus	Riken	ILMN_206569	ILMN_206569	6030460N08RIK	ri|6030460N08|PX00057J02|AK077954|1877					AK077954	6030460N08Rik		ILMN_2581065	004890095	S	1443	GTCGCAGAGGTCCTGAGATTGCAGCAAGCTTTGACTGATGCTGAAAATGA										
Mus musculus	MEEBO	ILMN_184583	ILMN_184583	EFHD1	scl17699.5_53				13386359	NM_028889	Efhd1		ILMN_2613306	001260095	S	1480	GGATAGCTGTCACCCGACCCCATTCAAATCAGAGTGGACCTGTGAAACTC						The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184583	ILMN_184583	EFHD1	scl17699.5_53				13386359	NM_028889	Efhd1		ILMN_2419854	005820632	S	8	AGAAAACATCTGCCCTTCTATCTTAACAGCTGTTTACTTTTAAATAAAAC						The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209794	ILMN_238440	D330038O06RIK	NM_177899.3	NM_177899.3		330788	141801937	NM_177899.3	D330038O06Rik	NP_808567.2	ILMN_2769672	000830326	S	2047	CTGGAGGAAAAAACCCTTGCTGTTTAGATGTCATTGCTCCCATAGATTCC	8	-	72288890-72288939	8qB3.3	Mus musculus RIKEN cDNA D330038O06 gene (D330038O06Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196392	ILMN_196392	1700081H05RIK	XM_147789.1	XM_147789.1			20897783	XM_147789.1	1700081H05Rik		ILMN_1220608	004610653	S	906	CTGCCTCGGTTTGTAACACCTCCCCGGATTCTCTGGAAAGTTCTGGCTTG										
Mus musculus	RefSeq	ILMN_220966	ILMN_220966	1700067C01RIK	NM_029714.1	NM_029714.1		76718	46810283	NM_029714.1	1700067C01Rik	NP_083990.1	ILMN_2729229	003460088	S	3917	CAGAGTCCTATTATACATATGCCTCCTCTACTGCGGGCTTCAGCCTCCAG	7	-	29406467-29406516	7qB1	Mus musculus RIKEN cDNA 1700067C01 gene (1700067C01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215011	ILMN_215011	CBX5	NM_007626.3	NM_007626.3		12419	116008459	NM_007626.3	Cbx5	NP_031652.1	ILMN_1225197	001690176	S	3042	CCGAGGATACAGTCTGAGAGTTAATGCCTTGTAATGCAAAAAATGAAGGG	15	-	103027687-103027736	15qF3	Mus musculus chromobox homolog 5 (Drosophila HP1a) (Cbx5), transcript variant 1, mRNA. XM_924875	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure [goid 10369] [evidence IDA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	C75991; 2610029O15Rik; Hp1a; HP1	C75991; 2610029O15Rik; Hp1a; HP1
Mus musculus	RefSeq	ILMN_212509	ILMN_212509	HSD17B10	NM_016763.2	NM_016763.2		15108	61888837	NM_016763.2	Hsd17b10	NP_058043.3	ILMN_1238614	000060768	S	831	TCAATTTGAAGGAAAGCTAACAGCCACTTTGTAACTCTGCTCCACTCACC	X	+	148438905-148438954	XqF3	Mus musculus hydroxysteroid (17-beta) dehydrogenase 10 (Hsd17b10), nuclear gene encoding mitochondrial protein, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NAD+ + 2-methyl-3-hydroxybutyryl-CoA = NADH + H+ + 2-methylaceto-acetyl-CoA [goid 47015] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+ [goid 3857] [evidence IEA]	17bHSD10; Hadh2; Ads9; ERAB	17bHSD10; Hadh2; Ads9; ERAB
Mus musculus	MEEBO	ILMN_208976	ILMN_208976	CLMN	scl0002361.1_25	NM_053155.1			16716442	NM_053155.1	Clmn		ILMN_1258756	002480050	S	2908	TGGTAGTTCTGGGGATTGAACCACAGCCTCATGCATGCTAGGAGGTGAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195618	ILMN_316697	2410006H16RIK	XM_001479267.1	XM_001479267.1		69221	149261960	XM_001479267.1	2410006H16Rik	XP_001479317.1	ILMN_1231490	002570735	S	75	TGAGCCCGGGCCCAGCCTCTCAGCTCCGCCTTGTGCGCTGCACAGATCTA	11	+	62416466-62416515	11qB2	PREDICTED: Mus musculus RIKEN cDNA 2410006H16 gene (2410006H16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209754	ILMN_209754	PRODH2	NM_019546.5	NM_019546.5		56189	142372879	NM_019546.5	Prodh2	NP_062419.2	ILMN_2598892	002190148	S	1158	CCTCTGGATGGGCCTGTCTGTTTTGGACAACTTCTGGGCATGTGTGACCA	7	+	31296176-31296225	7qB1	Mus musculus proline dehydrogenase (oxidase) 2 (Prodh2), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6560] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid [goid 6537] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6562] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-proline + acceptor = (S)-1-pyrroline-5-carboxylate + reduced acceptor [goid 4657] [evidence IEA]	MmPOX1; 2510038B11Rik; 2510028N04Rik; MmPOX; POX1	MmPOX1; 2510038B11Rik; 2510028N04Rik; MmPOX; POX1
Mus musculus	RefSeq	ILMN_221458	ILMN_234609	CCL9	NM_011338.2	NM_011338.2		20308	85540457	NM_011338.2	Ccl9	NP_035468.1	ILMN_2776603	007050538	S	997	GCTACAGCCATCCTAACTGCCTCAGAATCACTCAAGTTCTTCCACTCGGT	11	-	83388380-83388429	11qC	Mus musculus chemokine (C-C motif) ligand 9 (Ccl9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	Scya9; MRP-2; CCF18; Scya10	Scya9; MRP-2; CCF18; Scya10
Mus musculus	RefSeq	ILMN_213255	ILMN_213255	SH3GLB2	NM_139302.1	NM_139302.1		227700	21314837	NM_139302.1	Sh3glb2	NP_647463.1	ILMN_2635240	005490408	S	1278	GGGACCTAACCCTTTTCTGGCTGTGCCCGTCATTCAGCTATTAAAGAGCC	2	-	30200726-30200775	2qB	Mus musculus SH3-domain GRB2-like endophilin B2 (Sh3glb2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1848	mKIAA1848
Mus musculus	RefSeq	ILMN_220594	ILMN_220594	PDE4DIP	NM_178080.4	NM_178080.4		83679	86476089	NM_178080.4	Pde4dip	NP_835181.2	ILMN_2751354	005720020	S	6000	CGAACACAGTTCTGATGAATTGTACAGCGTGAGCCACAGGTGGATGGTAC	3	-	97542917-97542966	3qF2.2	Mus musculus phosphodiesterase 4D interacting protein (myomegalin) (Pde4dip), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C87016; D130016K21Rik; 4732458A06Rik; KIAA0477; 9430063L05Rik; Usmg4; D3Bwg1078e; mKIAA0454	C87016; D130016K21Rik; 4732458A06Rik; KIAA0477; 9430063L05Rik; Usmg4; D3Bwg1078e; mKIAA0454
Mus musculus	MEEBO	ILMN_184313	ILMN_184313	0610005C13RIK	scl31370.6.1_3						0610005C13Rik		ILMN_2417611	000870465	S	3	TTTGCAGTTCCACCCCTTACCTAGGGTGTGCGGAAGCTGGGGCGCCCCGT										
Mus musculus	RefSeq	ILMN_210219	ILMN_245221	MCHR1	NM_145132.1	NM_145132.1		207911	21553072	NM_145132.1	Mchr1	NP_660114.1	ILMN_2603364	003840717	S	939	ACTCTGTGAGACCTTTCGAAAACGCTTGGTGCTGTCGGTGAAGCCCGCGG	15	+	81068419-81068468	15qE1	Mus musculus melanin-concentrating hormone receptor 1 (Mchr1), mRNA.	An immotile primary cilium that may be missing the central pair of microtubules, or the central pair of microtubules and outer dynein arms. Some primary cilia also have altered arrangements of outer microtubules (fewer than nine and/or not always present as doublets). Nonmotile primary cilia typically function as sensory organelles that concentrate and organize sensory signaling molecules [goid 31513] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process that modulates the rate, frequency or extent of the behavior associated with the intake of food [goid 60259] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the cyclic peptide hormone melanin-concentrating hormone to initiate a change in cell activity [goid 30273] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MCH-1R; Gpr24-9; AW049955; Mch1r; Gpr24	MCH-1R; Gpr24-9; AW049955; Mch1r; Gpr24
Mus musculus	RefSeq	ILMN_237057	ILMN_237057	A430078G23RIK	NM_001033378.1	NM_001033378.1		319493	85701882	NM_001033378.1	A430078G23Rik	NP_001028550.1	ILMN_3043368	004590176	I	775	ACCTGTCAGTGGGACACCAGCACCCTCAAGCAAGGAATGTAGCAGCCCTG	8	+	3381948-3381980:3384897-3384913	8qA1.1	Mus musculus RIKEN cDNA A430078G23 gene (A430078G23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215696	ILMN_235749	EFNA5	NM_010109.2	NM_010109.2		13640	46560568	NM_010109.2	Efna5	NP_034239.1	ILMN_2662536	006840577	S	737	CCCAGCCGCCTTTTGGCAATCCTACTGTTCCTCCTGGCGATGCTTTTGAC	17	-	62956697-62956746	17qE1.1	Mus musculus ephrin A5 (Efna5), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal [goid 45499] [evidence IDA]	AL-1; Epl7; AV158822; RAGS; EFL-5; LERK-7; Ephrin-A5	AL-1; Epl7; AV158822; RAGS; EFL-5; LERK-7; Ephrin-A5
Mus musculus	RefSeq	ILMN_215696	ILMN_235749	EFNA5	NM_010109.2	NM_010109.2		13640	46560568	NM_010109.2	Efna5	NP_034239.1	ILMN_2757641	000150504	S	3289	CTCATGGCCCTCTCTGCCATTGTCTTTCATTTCCCACTGTGCAATTAGAC	17	-	62954145-62954194	17qE1.1	Mus musculus ephrin A5 (Efna5), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal [goid 45499] [evidence IDA]	AL-1; Epl7; AV158822; RAGS; EFL-5; LERK-7; Ephrin-A5	AL-1; Epl7; AV158822; RAGS; EFL-5; LERK-7; Ephrin-A5
Mus musculus	RefSeq	ILMN_187084	ILMN_228562	RGS17	NM_019958.3	NM_019958.3		56533	142388938	NM_019958.3	Rgs17	NP_064342.1	ILMN_1249809	002760189	S	1133	CGTCTGCCCTTTACTTGTGCTATTAAATCAGTAGCATACCTTGTATCTGT	10	+	4513932-4513981	10qA1	Mus musculus regulator of G-protein signaling 17 (Rgs17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Rgsz2; 6430507P11Rik	Rgsz2; 6430507P11Rik
Mus musculus	RefSeq	ILMN_209647	ILMN_209647	ARC	NM_018790.2	NM_018790.2		11838	86604725	NM_018790.2	Arc	NP_061260.1	ILMN_2597827	003060180	S	2881	TAGGGTGTGTAGGTAGGCCCTGGGGACTAGGGAGACCCTGGAGATCTCAA	15	-	74499639-74499688	15qD3	Mus musculus activity regulated cytoskeletal-associated protein (Arc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence TAS]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]	arg 3.1; C86064; Arc3.1	arg 3.1; C86064; Arc3.1
Mus musculus	RefSeq	ILMN_219429	ILMN_242584	2310066E14RIK	NM_001081241.2	NM_001081241.2		75687	145301545	NM_001081241.2	2310066E14Rik	NP_001074710.2	ILMN_1235324	001030239	S	3551	TTGTGCTTCCTGGACCAGCTGGAAGATGGGGACGTGCAGACTCGAGTGGC				8qD3	Mus musculus RIKEN cDNA 2310066E14 gene (2310066E14Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI837433; MGC100216	AI837433; MGC100216
Mus musculus	MEEBO	ILMN_187502	ILMN_187502	2500003M10RIK	scl21915.6_312				32129271	NM_023215	2500003M10Rik		ILMN_1215084	004250253	S	2	ACAAATTGTTCTCTCAAAATTTAACCCAGGCTTTCTGTTTATTTGGGGGG										
Mus musculus	MEEBO	ILMN_194737	ILMN_194737	1110014O20RIK	scl29120.2_538						1110014O20Rik		ILMN_1233987	004560731	S	1	GGCGGGGTCCTGTTGTGGTGAACTGTTATAGCTTGTTACTCAGTTTCTTT										
Mus musculus	RefSeq	ILMN_222526	ILMN_222526	OLFR128	NM_206816.1	NM_206816.1		383243	45592939	NM_206816.1	Olfr128	NP_996552.1	ILMN_2750917	006060168	S	590	GAAAGTGTCTACTTTCATTGCTGTAATGGGATTTGCCTGCTTTATGGGGA	17	+	38061102-38061151	17qB1	Mus musculus olfactory receptor 128 (Olfr128), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR218-13; GA_x5J8B7W5KGR-591839-591418; GA_x5J8B7TWBT8-615-998; GA_x6K02T2PSCP-2374126-2375048	MOR218-13; GA_x5J8B7W5KGR-591839-591418; GA_x5J8B7TWBT8-615-998; GA_x6K02T2PSCP-2374126-2375048
Mus musculus	RefSeq	ILMN_216319	ILMN_245084	OLFR794	NM_146378.1	NM_146378.1		258375	22129548	NM_146378.1	Olfr794	NP_666490.1	ILMN_1255407	005290707	S	654	CATTATCCGGACAATTCTCAGATTCCCTTCTGCTCATCAGAGGAAGAAAG	10	+	129008366-129008415	10qD3	Mus musculus olfactory receptor 794 (Olfr794), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR114-11	MOR114-11
Mus musculus	MEEBO	ILMN_184137	ILMN_184137	HNT	scl0076119.1_273				31982043	NM_172290	Hnt		ILMN_1221968	002360678	S	20	TCTATATCCCTGACAGGTAAACATAAAATTAGTTACCTAGTGCCAGCCAC						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_204900	ILMN_328305	LOC623312	XM_001475967.1	XM_001475967.1		623312	149264705	XM_001475967.1	LOC623312	XP_001476017.1	ILMN_1234748	001070669	S	1065	GTATGGGTATGTCTCTTCACCCCCACAGGTGTGTGCATGTGATTCTCTGC	13	+	117924140-117924189	13qD2.3	PREDICTED: Mus musculus hypothetical protein LOC623312 (LOC623312), mRNA.					
Mus musculus	RefSeq	ILMN_209541	ILMN_239496	MYH1	NM_030679.1	NM_030679.1		17879	82524273	NM_030679.1	Myh1	NP_109604.1	ILMN_2740259	005080725	S	5950	CAAAATGTGAAGATCTTTGTCACTCTGTTTTGTACTCATAACTTTGGGAG	11	+	67038008-67038057	11qB3	Mus musculus myosin, heavy polypeptide 1, skeletal muscle, adult (Myh1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MdMs; A530084A17Rik; Myhs-f; MYHC-IIX; MyHC-IIx/d; MyHC-IId/x; Myhs-f2; IId; MHC-2X/D; MGC117705; Myhsf2; MHC2X/D; IId/x	MdMs; A530084A17Rik; Myhs-f; MYHC-IIX; MyHC-IIx/d; MyHC-IId/x; Myhs-f2; IId; MHC-2X/D; MGC117705; Myhsf2; MHC2X/D; IId/x
Mus musculus	RefSeq	ILMN_239496	ILMN_239496	MYH1	NM_030679.1	NM_030679.1		17879	82524273	NM_030679.1	Myh1	NP_109604.1	ILMN_2865744	006860228	S	5715	ACTGCAATCAAAGGTCAAGGCCTACAAGAGACAAGCTGAGGAAGCGGAGG	11	+	67035923-67035968:67037819-67037822	11qB3	Mus musculus myosin, heavy polypeptide 1, skeletal muscle, adult (Myh1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MdMs; A530084A17Rik; Myhs-f; MYHC-IIX; MyHC-IIx/d; MyHC-IId/x; Myhs-f2; IId; MHC-2X/D; MGC117705; Myhsf2; MHC2X/D; IId/x	MdMs; A530084A17Rik; Myhs-f; MYHC-IIX; MyHC-IIx/d; MyHC-IId/x; Myhs-f2; IId; MHC-2X/D; MGC117705; Myhsf2; MHC2X/D; IId/x
Mus musculus	MEEBO	ILMN_189950	ILMN_189950	PCDHB19	scl52054.1_546				18087798	NM_053144	Pcdhb19		ILMN_2465874	001010088	S	10	CTCAACAGAAGGTCCAGGTAACTGTCTTGTTGCTTCAAGCTTTTCCAGAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_209274	ILMN_209274	B230354K17RIK	scl50691.4_417	NM_177065.2			31342725	NM_177065.2	B230354K17Rik		ILMN_2594256	002570601	S	4548	TAATTATCATTATTTAAGTTTAAGATACTAAAAGGATGTCCCCTAAAGGA										
Mus musculus	RefSeq	ILMN_218134	ILMN_218134	OTUB1	NM_134150.2	NM_134150.2		107260	118129951	NM_134150.2	Otub1	NP_598911.1	ILMN_3127375	002850382	A	1014	TATTAAAGGGGATGCTGGTGGTGAGCCCGAGTGTGCGCTTCCCTGCTCTG	19	-	7273309-7273358	19qA	Mus musculus OTU domain, ubiquitin aldehyde binding 1 (Otub1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	AI850305	AI850305
Mus musculus	RefSeq	ILMN_221781	ILMN_312763	LOC100041703	XM_001477173.1	XM_001477173.1		100041703	149248946	XM_001477173.1	LOC100041703	XP_001477223.1	ILMN_3163159	007610543	A	306	GTCTGTACAAAAGCTTCTCTTTAACACGTGCCATAATACACTATCTTCTG	2	-	22332032-22332081	2qA3	PREDICTED: Mus musculus similar to G protein gamma-5 subunit (LOC100041703), mRNA.					
Mus musculus	RefSeq	ILMN_214413	ILMN_214413	CCL11	NM_011330.1	NM_011330.1		20292	6755417	NM_011330.1	Ccl11	NP_035460.1	ILMN_2862179	000830273	S	880	TCACAGAAATTTACCTGCCTCTGCCTTTAAGTGCTACCATGCCAAGCCAG	11	+	81879047-81879096	11qC	Mus musculus small chemokine (C-C motif) ligand 11 (Ccl11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	eotaxin; Scya11	eotaxin; Scya11
Mus musculus	RefSeq	ILMN_224946	ILMN_224946	SCRN1	NM_027268.1	NM_027268.1		69938	38044103	NM_027268.1	Scrn1	NP_081544.1	ILMN_2871545	002630138	S	1508	CCTCTGTTCAGCTTAGCAACCCTCCCCCCTTTGCTATGTAACGCGATCCC	6	-	54438613-54438662	6qB3	Mus musculus secernin 1 (Scrn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]	AI852905; SES1; mKIAA0193; KIAA0193; 6330535A03Rik; 2810019K23Rik	AI852905; SES1; mKIAA0193; KIAA0193; 6330535A03Rik; 2810019K23Rik
Mus musculus	RefSeq	ILMN_184686	ILMN_238363	MUC2	XM_001001905.1	XM_001001905.1		17831	94381408	XM_001001905.1	Muc2	XP_001001905.1	ILMN_2675214	005050474	S	7222	GTACCGTGCACATTCCTTCGCATCTTAAACTATTCTGCTGACTCTCTGAC				7qF5	PREDICTED: Mus musculus mucin 2 (Muc2), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_195114	ILMN_256598	4932417H02RIK	NM_028898.2	NM_028898.2		74370	154146248	NM_028898.2	4932417H02Rik	NP_083174.2	ILMN_2588329	005890327	S	4672	TGATCAACAACATCAAATACTATGATGGCTTCATGGGCCAGCGAGTCGGG				11qE2	Mus musculus RIKEN cDNA 4932417H02 gene (4932417H02Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP24-225K18.1; Raptor; mKIAA1303	RP24-225K18.1; Raptor; mKIAA1303
Mus musculus	RefSeq	ILMN_204373	ILMN_256598	4932417H02RIK	NM_028898.2	NM_028898.2		74370	154146248	NM_028898.2	4932417H02Rik	NP_083174.2	ILMN_1250017	003460025	S	6533	ACCAGTGTTTGCATCTTGCCCACAGGCTGGGCCTCACAAGTCTGATGCGG				11qE2	Mus musculus RIKEN cDNA 4932417H02 gene (4932417H02Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP24-225K18.1; Raptor; mKIAA1303	RP24-225K18.1; Raptor; mKIAA1303
Mus musculus	MEEBO	ILMN_224224	ILMN_224224	ATP5K	scl011958.2_29				6671591	NM_007507	Atp5k		ILMN_2776899	004880626	S	158	GCAGCGGAGGAAAAGAAGAGACTAGATGAGTTGAAACGGATTGAGAGAGA						All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187757	ILMN_187757	ANO6	NM_175344.3	NM_175344.3		105722	40254289	NM_175344.3	Ano6	NP_780553.2	ILMN_1228336	006590601	S	4497	TCAAAGCAGTGTTCTGGGCTTTTGAGTAGCCCAGGGGGTCAGTGTGGGAG	15	+	95804752-95804801	15qF1	Mus musculus anoctamin 6 (Ano6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2900059G15Rik; AW554778; AA407480; F730003B03Rik	2900059G15Rik; AW554778; AA407480; F730003B03Rik
Mus musculus	RefSeq	ILMN_218461	ILMN_218461	ABPG	NM_178308.1	NM_178308.1		110187	30315677	NM_178308.1	Abpg	NP_840093.1	ILMN_2696136	004900561	S	308	AAAATTCAAGATTTTCTTAACCAGTCAAATATCCATTAGAAGTTAATGGT	7	-	34728173-34728184:34728185-34728222	7qB1	Mus musculus androgen binding protein gamma (Abpg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Scgb2b4; MGC130244; MGC130243; C2d	Scgb2b4; MGC130244; MGC130243; C2d
Mus musculus	RefSeq	ILMN_249961	ILMN_249961	SFT2D2	NM_145512.2	NM_145512.2		108735	31541854	NM_145512.2	Sft2d2	NP_663487.1	ILMN_2925008	006480066	S	4913	ACCTTGAATAAGGAAGGCAAGGTAAACAAAGCAAGCCTCCCTGGACTCCG	1	-	167011466-167011515	1qH2.3	Mus musculus SFT2 domain containing 2 (Sft2d2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AW561909; AI506168; cI-45; 2010005O13Rik	AW561909; AI506168; cI-45; 2010005O13Rik
Mus musculus	RefSeq	ILMN_197876	ILMN_309842	AJAP1	NM_001099299.1	NM_001099299.1		230959	150010628	NM_001099299.1	Ajap1	NP_001092769.1	ILMN_1231205	002650731	S	2728	GTCCAGGGAGACAGCCTCAACCCAGAGGACGAGCCCTTACGTGACAACTT				4qE2	Mus musculus adherens junction associated protein 1 (Ajap1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm573; RP23-144K17.1	Gm573; RP23-144K17.1
Mus musculus	RefSeq	ILMN_221573	ILMN_221573	STAB2	NM_138673.2	NM_138673.2		192188	141801480	NM_138673.2	Stab2	NP_619614.1	ILMN_2737368	002450113	S	7898	CATGGGTAAGGGGACATGTTTCCAGGACACCAGTATACCTCTGCCTCCTC	10	-	86304140-86304189	10qC1	Mus musculus stabilin 2 (Stab2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FELL; STAB-2; FEEL-2	FELL; STAB-2; FEEL-2
Mus musculus	RefSeq	ILMN_259719	ILMN_259719	OLFR216	NM_207693.1	NM_207693.1		404346	125991241	NM_207693.1	Olfr216	NP_997576.1	ILMN_2947039	003610450	S	576	TGCCGCAGTGGAAGGCACCGTCTTCGTCCTGGCAATAGGCATCGTGTTGT	11	+	58475224-58475273	11qB1.3	Mus musculus olfactory receptor 216 (Olfr216), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-64; Olfr216-ps1	MOR256-64; Olfr216-ps1
Mus musculus	MEEBO	ILMN_186988	ILMN_186988	5330423I11RIK	scl37146.1.1_205						5330423I11Rik		ILMN_2440194	007150088	S	18	AGTCCAGAAAGCAAATAACCGCCTTGATTCCTTTGAGGGGTGCTCTGTTG										
Mus musculus	RefSeq	ILMN_213097	ILMN_213097	CRISP3	NM_009639.2	NM_009639.2		11572	114796617	NM_009639.2	Crisp3	NP_033769.1	ILMN_2633613	002370064	S	1209	ATTATTCTTCACATTCAACATAATCAGTGGTTTAAATTCTAAAATACCAT	17	-	40358854-40358903	17qB2	Mus musculus cysteine-rich secretory protein 3 (Crisp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			SGP28; Aeg2; CRS3; CRISP-3	SGP28; Aeg2; CRS3; CRISP-3
Mus musculus	RefSeq	ILMN_196414	ILMN_245273	OTUD1	XM_991213.2	XM_991213.2		71198	149248915	XM_991213.2	Otud1	XP_996307.2	ILMN_1228267	001260386	S	613	ATATACACTTAACTACTGGAGGGAGGCTGGAGAGCCCCACCGTGTCTACC	2	+	19580779-19580828	2qA3	PREDICTED: Mus musculus OTU domain containing 1 (Otud1), mRNA.					
Mus musculus	RefSeq	ILMN_205750	ILMN_233691	MOSPD2	NM_029730.2	NM_029730.2		76763	142356338	NM_029730.2	Mospd2	NP_084006.1	ILMN_1257339	003130296	S	1456	CGAGTTAGAGAGAACAATTCAAACGAGCTTTAGGGGAGGGAGATGGAAGC	X	-	161399057-161399106	XqF5	Mus musculus motile sperm domain containing 2 (Mospd2), mRNA. XM_899692 XM_899707 XM_910453 XM_921622 XM_921629 XM_921633 XM_921640 XM_921646 XM_921656 XM_982908 XM_982943 XM_982977 XM_983014 XM_983049 XM_983093 XM_983132	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2410013I23Rik	2410013I23Rik
Mus musculus	Riken	ILMN_202190	ILMN_202190	1700064D17RIK	ri|1700064D17|ZX00075K08|AK006878|1554					AK006878	1700064D17Rik		ILMN_1231614	004810050	S	1246	CGATAAGCACGTTGGGGACTATGGCCCACCGCCATGTGCAGTCTTATGCG										
Mus musculus	RefSeq	ILMN_209008	ILMN_209008	D11WSU99E	NM_138598.5	NM_138598.5		28081	149588666	NM_138598.5	D11Wsu99e	NP_613064.2	ILMN_2657780	006760544	S	1660	AGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACTCTGGA				11qE2	Mus musculus DNA segment, Chr 11, Wayne State University 99, expressed (D11Wsu99e), mRNA.				RP23-407I21.2	RP23-407I21.2
Mus musculus	RefSeq	ILMN_209196	ILMN_209008	D11WSU99E	NM_138598.5	NM_138598.5		28081	149588666	NM_138598.5	D11Wsu99e	NP_613064.2	ILMN_1218959	002230575	S	1704	AGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAGCTTGCAA				11qE2	Mus musculus DNA segment, Chr 11, Wayne State University 99, expressed (D11Wsu99e), mRNA.				RP23-407I21.2	RP23-407I21.2
Mus musculus	RefSeq	ILMN_209008	ILMN_209008	D11WSU99E	NM_138598.5	NM_138598.5		28081	149588666	NM_138598.5	D11Wsu99e	NP_613064.2	ILMN_1217919	005080372	S	1655	TTGCAAGCTGCCTGAATAAGGAGCCAGGATGCGTCGTCGGGTCACCTACT				11qE2	Mus musculus DNA segment, Chr 11, Wayne State University 99, expressed (D11Wsu99e), mRNA.				RP23-407I21.2	RP23-407I21.2
Mus musculus	RefSeq	ILMN_209196	ILMN_209008	D11WSU99E	NM_138598.5	NM_138598.5		28081	149588666	NM_138598.5	D11Wsu99e	NP_613064.2	ILMN_2613354	000110091	S	1711	TCTCCAGAGTAGGTGACCCGACGACGCATCCTGGCTCCTTATTCAGGCAG				11qE2	Mus musculus DNA segment, Chr 11, Wayne State University 99, expressed (D11Wsu99e), mRNA.				RP23-407I21.2	RP23-407I21.2
Mus musculus	RefSeq	ILMN_192319	ILMN_246113	MLL1	NM_001081049.1	NM_001081049.1		214162	124486681	NM_001081049.1	Mll1	NP_001074518.1	ILMN_1218169	002650672	S	15053	CAACCCAAACTCCTTTTTCAGGACCCAGCTCACCTCTGTCAAACCCCGGC	9	-	44612774-44612823	9qA5.2	Mus musculus myeloid/lymphoid or mixed-lineage leukemia 1 (Mll1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated [goid 44428] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3 [goid 51569] [evidence IMP]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	HRX; Mll; 6430520K01; HTRX1; KIAA4050; All1; Cxxc7; ALL-1; mKIAA4050	HRX; Mll; 6430520K01; HTRX1; KIAA4050; All1; Cxxc7; ALL-1; mKIAA4050
Mus musculus	RefSeq	ILMN_192319	ILMN_246113	MLL1	NM_001081049.1	NM_001081049.1		214162	124486681	NM_001081049.1	Mll1	NP_001074518.1	ILMN_1222137	002100364	S	16194	GGGGGGAAGGAAAACGTGTCTGAAGCCCATCAGTGTTAACTCCCTGAGAC	9	-	44611633-44611682	9qA5.2	Mus musculus myeloid/lymphoid or mixed-lineage leukemia 1 (Mll1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated [goid 44428] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3 [goid 51569] [evidence IMP]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	HRX; Mll; 6430520K01; HTRX1; KIAA4050; All1; Cxxc7; ALL-1; mKIAA4050	HRX; Mll; 6430520K01; HTRX1; KIAA4050; All1; Cxxc7; ALL-1; mKIAA4050
Mus musculus	MEEBO	ILMN_222454	ILMN_222454	1700023B23RIK	scl27097.4.21_8	XM_132432.2			28521162	XM_132432.2	1700023B23Rik		ILMN_2749782	006510072	S	859	CTTTAGGCAGGGGAGCCCCAGATCCTTTGAAAGCCCCCACCTCACTCTTA										
Mus musculus	MEEBO	ILMN_193927	ILMN_193927	SCL0003749.1_1	scl0003749.1_1	AK028023.1			26389255	AK028023.1	scl0003749.1_1		ILMN_1241308	001690113	S	1	CGACGCTGAAGTGGGAGGGGGTTTGTCCTCGTTCTCTGTCTAGCAGTGAC										
Mus musculus	MEEBO	ILMN_193927	ILMN_193927	SCL0003749.1_1	scl0003749.1_1	AK028023.1			26389255	AK028023.1	scl0003749.1_1		ILMN_1243584	005310441	S	853	GGTGTGCCAGTATTACCATAACAGCGAGGGTGTCCTTAACTTGGTGGCGG										
Mus musculus	RefSeq	ILMN_225893	ILMN_225893	OTOP3	NM_027132.1	NM_027132.1		69602	58037166	NM_027132.1	Otop3	NP_081408.1	ILMN_3028395	006130747	I	600	CGTGAGCCACATTCACTGCAAGTCAGAAGTGGAACTCATCTTTCCGGCCA	11	+	115200983-115201032	11qE2	Mus musculus otopetrin 3 (Otop3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]			2310011E08Rik	2310011E08Rik
Mus musculus	RefSeq	ILMN_225893	ILMN_225893	OTOP3	NM_027132.1	NM_027132.1		69602	58037166	NM_027132.1	Otop3	NP_081408.1	ILMN_3101539	006550092	A	1913	GCCACAGCGGAACCCCGAAAGTGCCAAGGCAGAAAAAGAAACTCGGGAGT	11	+	115205755-115205804	11qE2	Mus musculus otopetrin 3 (Otop3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]			2310011E08Rik	2310011E08Rik
Mus musculus	MEEBO	ILMN_186748	ILMN_186748	UTRN	scl38202.1.1_35				46849771	NM_011682	Utrn		ILMN_1236544	003940609	S	1	GGAGCTACTGAGATTTATCAGGTTACTCTCTCAAATCCACTTTCATCACT						A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	The process whose specific outcome is the progression of the adult somatic muscle over time, from its formation to the mature structure [goid 7527] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211578	ILMN_211578	NUDT8	NM_025529.3	NM_025529.3		66387	142381955	NM_025529.3	Nudt8	NP_079805.1	ILMN_2617305	005340463	S	588	TTGCATGGACCACACCGTGTCTGGGGCCTCACAGCTGTCATCACTGAGCT	19	+	4001904-4001953	19qA	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 8 (Nudt8), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2310039H17Rik	2310039H17Rik
Mus musculus	RefSeq	ILMN_208808	ILMN_208808	TMEM51	NM_145402.3	NM_145402.3		214359	118130125	NM_145402.3	Tmem51	NP_663377.1	ILMN_2589741	002750594	S	1788	CGAAAGGCAAGAGAGGAAGTCGCTGCTCCATGCCTTCTCAAACGCCATGC	4	-	141586944-141586993	4qE1	Mus musculus transmembrane protein 51 (Tmem51), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BC003277; FLJ10199; RP23-103K12.2	BC003277; FLJ10199; RP23-103K12.2
Mus musculus	RefSeq	ILMN_247856	ILMN_247856	TTF2	NM_001013026.1	NM_001013026.1		74044	71480147	NM_001013026.1	Ttf2	NP_001013044.1	ILMN_3000116	003840762	S	4180	GGCTGCGTCTTGTAAGCCTCTTTGTAACCAACCATCCCTATGAGGCTGGC	3	-	100755140-100755162:100756472-100756498	3qF2.2	Mus musculus transcription termination factor, RNA polymerase II (Ttf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	8030447N19; 4632434F22Rik; AV218430	8030447N19; 4632434F22Rik; AV218430
Mus musculus	RefSeq	ILMN_194845	ILMN_194845	WNT7A	NM_009527.3	NM_009527.3		22421	144227223	NM_009527.3	Wnt7a	NP_033553.2	ILMN_1248290	000150020	S	2835	GCTTACATGTATCTCTCTGTGCTTGGGAGATCAGACCATGTGCATGGAGC	6	-	91314268-91314317	6qD1	Mus musculus wingless-related MMTV integration site 7A (Wnt7a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IMP]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The reproductive developmental process whose specific outcome is the progression of structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures [goid 48608] [evidence IMP]; The process by which the anatomical structures of the skin are generated and organized. Morphogenesis pertains to the creation of form. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43589] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IDA]; Any process that modulates the rate, direction or extent of axon growth such that the correct diameter is attained and maintained [goid 31133] [evidence IDA]; Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence IDA]; Any process that activates, maintains or increases the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51965] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	tw; AI849442; Wnt-7a; px	tw; AI849442; Wnt-7a; px
Mus musculus	Riken	ILMN_207164	ILMN_207164	F830001D05RIK	ri|F830001D05|PL00004A17|AK089554|1713					AK089554	F830001D05Rik		ILMN_1241006	004730274	S	1607	ACCTACTGCACACAGAAGCCAGAAAAGGACACCAAATGCCCTCAAACTGG										
Mus musculus	RefSeq	ILMN_197076	ILMN_197076	LOC268602	XM_193691.2	XM_193691.2			38073806	XM_193691.2	LOC268602		ILMN_1237326	006100181	S	238	CCCCCCAAAAGGAAAGACCAAAAGAAGTTCAAGGACCCCAATGCATCCAA										
Mus musculus	RefSeq	ILMN_200199	ILMN_200199	LOC385923	XM_359000.1	XM_359000.1			38080884	XM_359000.1	LOC385923		ILMN_1230140	000650221	S	972	GTTCACACAATATCTCTCCACGAATCCAGCCCTTCAAAGGATAATAGCAG										
Mus musculus	RefSeq	ILMN_209132	ILMN_209132	DAO1	NM_010018.2	NM_010018.2		13142	110815856	NM_010018.2	Dao1	NP_034148.2	ILMN_2862633	006290519	S	1430	GCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTGAC	5	+	114475187-114475236	5qF	Mus musculus D-amino acid oxidase 1 (Dao1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving leucine, 2-amino-4-methylpentanoic acid [goid 6551] [evidence IMP]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 3884] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DAO; Dao-1; AI987963	DAO; Dao-1; AI987963
Mus musculus	MEEBO	ILMN_213110	ILMN_213110	BC004728	scl0207818.1_83	NM_174992.2			31341357	NM_174992.2	BC004728		ILMN_1247198	003610025	S	695	GCTGTTCATGATGCTGGGCCTTGATAAGGACAGTGCTCGAAACCGACCAC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_199609	ILMN_199609	LOC382791	XM_356676.1	XM_356676.1			38074995	XM_356676.1	LOC382791		ILMN_1247328	003850133	S	633	GCCAAACCCAACAAATGCGAATTCAGGTCCTCCGGGAGGTGGAGGACCAC										
Mus musculus	RefSeq	ILMN_199298	ILMN_239698	NLRP4G	NM_001004145.2	NM_001004145.2		235779	142369144	NM_001004145.2	Nlrp4g	NP_001004145.1	ILMN_1223790	003990139	S	2289	CTGCAGTTTGCAATATTTGGACCTTGGCTGCTCATTTCTGACTCACAGTG	9|NT_166313.1	+	134150-134199		Mus musculus NLR family, pyrin domain containing 4G (Nlrp4g), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	nalp4g; MGC91128	nalp4g; MGC91128
Mus musculus	RefSeq	ILMN_207511	ILMN_207511	MID1	XM_142314.1	XM_142314.1			20986385	XM_142314.1	Mid1		ILMN_2587912	005130142	I	230	TTTCTGCCGGCTTTGGTGTCTGCGCTTGGAAGCCTGCGGTTGAGTTGGGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IGI]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_222804	ILMN_222804	A130030D10RIK	NM_177783.2	NM_177783.2		277395	31343035	NM_177783.2	A130030D10Rik	NP_808451.1	ILMN_2981643	003120050	S	1430	CTGCCTCATCAAGAGTGAGCTGCAAGGTAAGCTCCAATTATGCCACTTGC	2	+	69739127-69739176		Mus musculus RIKEN cDNA A130030D10 gene (A130030D10Rik), mRNA.					
Mus musculus	MEEBO	ILMN_209295	ILMN_209295	OLFR1338	scl0258259.1_104				46391060	NM_207152	Olfr1338		ILMN_2769476	003870170	S	666	TACCAAGGCAATTCTCAAGATCAAGTCCACCCAGGCCCGCTGTAAAGCTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	MEEBO	ILMN_215871	ILMN_215871	DAD1	scl0013135.2_58	NM_010015.1			6753597	NM_010015.1	Dad1		ILMN_2664628	007550678	S	297	CCGGAGCGAGCCTTTGCTGACTTCCTCTTTGCCAGCACGATCCTGCACCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [evidence IEA]		
Mus musculus	Riken	ILMN_203000	ILMN_203000	4732479B03RIK	ri|4732479B03|PX00052M11|AK028988|3151					AK028988	4732479B03Rik		ILMN_1234794	006550274	S	2930	GCTCCAGTGGGTGAAGATGGCAGGATGTGAAAGGCAGGGTGCAGAAGGCA										
Mus musculus	MEEBO	ILMN_188329	ILMN_188329	NKX1-2	scl30580.2_329				31982826	NM_009123	Nkx1-2		ILMN_1216442	004070220	S	12	GAACAAAGAGGTCAAAGGCCTGTACTAAGTGGGAAAGGTACCCTCTCAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209676	ILMN_209676	SDHD	NM_025848.2	NM_025848.2		66925	118130258	NM_025848.2	Sdhd	NP_080124.1	ILMN_1239143	006350603	S	1010	GGAGGTTGAGGAAAGCTGGATTTAGACAAGTTCAATTTAGGGAGTTCTCC	9	-	50404638-50404687	9qA5.3	Mus musculus succinate dehydrogenase complex, subunit D, integral membrane protein (Sdhd), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	C78570; PRO19626; AVLL5809; 3110001M13Rik	C78570; PRO19626; AVLL5809; 3110001M13Rik
Mus musculus	MEEBO	ILMN_222291	ILMN_222291	2410116I05RIK	scl073682.3_13	NM_028605.2			31541894	NM_028605.2	2410116I05Rik		ILMN_1251472	004920397	S	2555	CCCCTTGCTATCCAGGAGTATTAACTGGAAGTAAAATATTAAACGAAAGC										
Mus musculus	RefSeq	ILMN_216983	ILMN_216983	2610036D13RIK	NM_029282.1	NM_029282.1		75425	33859731	NM_029282.1	2610036D13Rik	NP_083558.1	ILMN_1234604	002070605	S	3524	TTAACTCTTTAGCTTACTGTCTGCACAACCCCTCTGCCTCACAAGTCCCC	2	-	157807735-157807784	2qH1	Mus musculus RIKEN cDNA 2610036D13 gene (2610036D13Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP23-91I20.4; AI449463	RP23-91I20.4; AI449463
Mus musculus	MEEBO	ILMN_191526	ILMN_191526	SIF1	scl0020455.1_36						Sif1		ILMN_2479848	005690576	S	3	CAGATTGGTGCTCACAACCATCCGTAACAAGATCTGACTCCCTCTTCTGG										
Mus musculus	RefSeq	ILMN_211120	ILMN_235171	PLEKHA8	NM_001001335.1	NM_001001335.1		231999	47716513	NM_001001335.1	Plekha8	NP_001001335.1	ILMN_2683119	001090736	S	794	CCTCAACTAGCGGTGCTTAAGTCCAGCAAGATGAAACATCCCATCATACC	6	+	54569317-54569346:54570266-54570285	6qB3	Mus musculus pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 (Plekha8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 46836] [evidence IEA]	Interacting selectively with a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic moiety such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate [goid 51861] [evidence IEA]; Enables the directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 17089] [evidence IEA]	AA517676; BC052360; 6330400G01; FAPP2	AA517676; BC052360; 6330400G01; FAPP2
Mus musculus	RefSeq	ILMN_211120	ILMN_235171	PLEKHA8	NM_001001335.1	NM_001001335.1		231999	47716513	NM_001001335.1	Plekha8	NP_001001335.1	ILMN_2735276	006290332	S	1781	GTGTGACAGCCACAGGACAGCACCTCCTAACTTCAGGGAATAAAGTCTGC	6	+	54590970-54590975:54590976-54591019	6qB3	Mus musculus pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 (Plekha8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 46836] [evidence IEA]	Interacting selectively with a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic moiety such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate [goid 51861] [evidence IEA]; Enables the directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 17089] [evidence IEA]	AA517676; BC052360; 6330400G01; FAPP2	AA517676; BC052360; 6330400G01; FAPP2
Mus musculus	RefSeq	ILMN_209759	ILMN_209759	BAI2	NM_173071.2	NM_173071.2		230775	146134457	NM_173071.2	Bai2	NP_775094.2	ILMN_2598946	002900669	S	4674	TCAAAGCTGGAGCACCTTCAAATCTATGACACTGGGCTCACTGCCCCCCA				4qD2.2	Mus musculus brain-specific angiogenesis inhibitor 2 (Bai2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 16527] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209759	ILMN_209759	BAI2	NM_173071.2	NM_173071.2		230775	146134457	NM_173071.2	Bai2	NP_775094.2	ILMN_2627244	006510358	S	1163	TGTGCAGCGGGCCCCTTCGGGAGACCCGGCCTTGCAACAATTCAGCCACC				4qD2.2	Mus musculus brain-specific angiogenesis inhibitor 2 (Bai2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 16527] [evidence IDA]		
Mus musculus	RefSeq	ILMN_200514	ILMN_200514	LOC384332	XM_357579.1	XM_357579.1			38083067	XM_357579.1	LOC384332		ILMN_1235587	001110593	S	16	TCCACTGAATCCCATGCAGGGAACTACACACACCAGATGGCTGGGCAGAG										
Mus musculus	RefSeq	ILMN_211564	ILMN_211564	MARCKSL1	NM_010807.3	NM_010807.3		17357	118130156	NM_010807.3	Marcksl1	NP_034937.1	ILMN_1215632	007380037	S	255	CGCGAAGGCCAACGGACAGGAGAATGGCCACGTGAGAAGCAATGGAGACT	4	+	129191142-129191160:129191961-129191991	4qD2.2	Mus musculus MARCKS-like 1 (Marcksl1), mRNA.		Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	Macs3; F52; AL022768; D4Bc1; Macs-2; AW215397; MacMARCKS; Macs-3; Mrp; Macs2; AW536807; Mlp	Macs3; F52; AL022768; D4Bc1; Macs-2; AW215397; MacMARCKS; Macs-3; Mrp; Macs2; AW536807; Mlp
Mus musculus	RefSeq	ILMN_211564	ILMN_211564	MARCKSL1	NM_010807.3	NM_010807.3		17357	118130156	NM_010807.3	Marcksl1	NP_034937.1	ILMN_2701891	000580121	S	175	CAGACCCCCATCATGGGCAGCCAGAGCTCTAAGGCTCCCCGGGGCGACGT	4	+	129191062-129191073:129191074-129191111	4qD2.2	Mus musculus MARCKS-like 1 (Marcksl1), mRNA.		Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	Macs3; F52; AL022768; D4Bc1; Macs-2; AW215397; MacMARCKS; Macs-3; Mrp; Macs2; AW536807; Mlp	Macs3; F52; AL022768; D4Bc1; Macs-2; AW215397; MacMARCKS; Macs-3; Mrp; Macs2; AW536807; Mlp
Mus musculus	RefSeq	ILMN_211564	ILMN_211564	MARCKSL1	NM_010807.3	NM_010807.3		17357	118130156	NM_010807.3	Marcksl1	NP_034937.1	ILMN_1250438	003840446	S	1249	GCCCCATCTGGGTTTTTATAAATGTCTTACTCAAGTTCAAACCTCCAGCT	4	+	129192936-129192985	4qD2.2	Mus musculus MARCKS-like 1 (Marcksl1), mRNA.		Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	Macs3; F52; AL022768; D4Bc1; Macs-2; AW215397; MacMARCKS; Macs-3; Mrp; Macs2; AW536807; Mlp	Macs3; F52; AL022768; D4Bc1; Macs-2; AW215397; MacMARCKS; Macs-3; Mrp; Macs2; AW536807; Mlp
Mus musculus	Riken	ILMN_202148	ILMN_202148	PTPN21	ri|2900073M23|ZX00069P13|AK013777|2343					AK013777	Ptpn21		ILMN_1233843	007560600	S	2049	CTAGGGGCGGGGCACAGAGAATGTGACTAAGGAAGGGAAAAAGAGCTGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185043	ILMN_185043	9330185J12RIK	scl26369.1.607_98						9330185J12Rik		ILMN_1246340	003130398	S	20	TCACTAACGGTCAAATGGGACAAGCACTACACAACTAACCCCTATTGGGG										
Mus musculus	RefSeq	ILMN_198376	ILMN_198376	LOC381188	XM_355117.1	XM_355117.1			38084731	XM_355117.1	LOC381188		ILMN_1240438	004890543	S	396	GCCTGACAGCTTGAGTCTGACCTGGGACCCACAGGATGGAAAGAGACATC										
Mus musculus	RefSeq	ILMN_184824	ILMN_225905	TMPO	NM_001080130.1	NM_001080130.1		21917	121949766	NM_001080130.1	Tmpo	NP_001073599.1	ILMN_1213625	003120138	S	973	CAGAGAGTACTCCCATAGCTGAAACTATAAAGGCTTCAAGCAACGAATCC	10	-	90615832-90615881	10qC2	Mus musculus thymopoietin (Tmpo), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence ISO]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	5630400D24Rik; TP; AI195756; AI606875; AW214352; AW547477; LAP2	5630400D24Rik; TP; AI195756; AI606875; AW214352; AW547477; LAP2
Mus musculus	RefSeq	ILMN_194483	ILMN_225905	TMPO	NM_001080130.1	NM_001080130.1		21917	121949766	NM_001080130.1	Tmpo	NP_001073599.1	ILMN_1220051	006100286	S	1028	GGCCAATAGGTTGACTGGAAATTTCAAGCATGCATCTTCTATTCTGCCAA	10	-	90615431-90615480	10qC2	Mus musculus thymopoietin (Tmpo), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence ISO]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	5630400D24Rik; TP; AI195756; AI606875; AW214352; AW547477; LAP2	5630400D24Rik; TP; AI195756; AI606875; AW214352; AW547477; LAP2
Mus musculus	MEEBO	ILMN_192559	ILMN_192559	ACTR1B	scl16868.12_117				22122614	NM_146107	Actr1b		ILMN_2489210	004230411	S	7	GTGCCCACACTTGTCAGTCTAAGTCTATGCTCTACAGTATCCTGCTACCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195324	ILMN_195324	AA517739	scl48224.17_6				51769389	XM_484570	AA517739		ILMN_1223050	001990309	S	20	CGGTTTGTGCAGTTGTTCTTTACTAGGGGACCTGATGCCTAGGTATCCTG										
Mus musculus	RefSeq	ILMN_217816	ILMN_259464	LOC633677	XM_908144.2	XM_908144.2		633677	94364711	XM_908144.2	LOC633677	XP_913237.2	ILMN_2687943	001770400	S	4517	CTAAAAAAGGTCATGAGATAAAACAGCTATTCTTATGCCTAAATTAACAG					PREDICTED: Mus musculus similar to Bifunctional aminoacyl-tRNA synthetase (LOC633677), mRNA.					
Mus musculus	Riken	ILMN_203405	ILMN_203405	5930404K09RIK	ri|5930404K09|PX00055M10|AK031098|2963					AK031098	5930404K09Rik		ILMN_1214477	002060292	S	2400	GTGGCTTAGACACCTGTATGCATTTTGTCACATACAGAGGCAGTTGTGGG										
Mus musculus	RefSeq	ILMN_208932	ILMN_241128	IDI1	NM_177960.3	NM_177960.3		319554	142354853	NM_177960.3	Idi1	NP_808875.1	ILMN_2590923	003140768	S	2393	GCTAACTCTGAACAGTTGATTTATCATTGGGGATATGACTATGTTGCAAG	13	+	8891536-8891585	13qA1	Mus musculus isopentenyl-diphosphate delta isomerase (Idi1), transcript variant 2, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail [goid 16117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the isomerization of isopentenyl diphosphate into dimethylallyl diphosphate [goid 4452] [evidence IEA]	MGC118013; 4832416K17Rik; MGC8139	MGC118013; 4832416K17Rik; MGC8139
Mus musculus	RefSeq	ILMN_208750	ILMN_244938	H2-DMB2	NM_010388.4	NM_010388.4		15000	153792520	NM_010388.4	H2-DMb2	NP_034518.1	ILMN_2589164	007040731	S	553	TCCTACGGGGACGTCTACACCTGCGTGGTTCAGCACAGCGGGACCTCTGA				17qB1	Mus musculus histocompatibility 2, class II, locus Mb2 (H2-DMb2), mRNA.	A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IDA]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence ISA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	H2-Mb2; H-2Mb2	H2-Mb2; H-2Mb2
Mus musculus	Riken	ILMN_204218	ILMN_204218	PRKCE	ri|A730046G04|PX00150J14|AK042994|1595					AK042994	Prkce		ILMN_2563287	001740452	S	1101	GAGCCGTCACTTCGAGGACTGGCAACCCAACCAGAGCCTAGCGTATTGTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IMP]; Behavior that is dependent upon the sensation of chemicals [goid 7635] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol but not calcium [goid 4699] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214275	ILMN_214275	1700102P08RIK	NM_053216.1	NM_053216.1		112418	16716520	NM_053216.1	1700102P08Rik	NP_444446.1	ILMN_2646254	005050255	S	454	AAAGCTGACCCAAATGTACTGCTCAGCAGTTCTAGCCAAGAGGTCACAAA	9	+	108295581-108295630	9qF2	Mus musculus RIKEN cDNA 1700102P08 gene (1700102P08Rik), mRNA.				AI593206	AI593206
Mus musculus	RefSeq	ILMN_210321	ILMN_210321	ZC3H12A	NM_153159.1	NM_153159.1		230738	24233518	NM_153159.1	Zc3h12a	NP_694799.1	ILMN_2604411	004040204	S	2000	GCAAGGGAATCCTCAAACCAAAGATACCATAGGATTGGTTCTGGCCCCGC	4	-	124796372-124796421	4qD2.2	Mus musculus zinc finger CCCH type containing 12A (Zc3h12a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC036563; MCPIP; MGC41320	BC036563; MCPIP; MGC41320
Mus musculus	RefSeq	ILMN_210321	ILMN_210321	ZC3H12A	NM_153159.1	NM_153159.1		230738	24233518	NM_153159.1	Zc3h12a	NP_694799.1	ILMN_2856095	006060349	S	2521	AGGTTGACAAAATAAAGGCTATTGCCAGGCAGGCTGGAGAGATGGCTCAG	4	-	124795851-124795900	4qD2.2	Mus musculus zinc finger CCCH type containing 12A (Zc3h12a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC036563; MCPIP; MGC41320	BC036563; MCPIP; MGC41320
Mus musculus	RefSeq	ILMN_210732	ILMN_210732	GRSF1	NM_178700.4	NM_178700.4		231413	148596933	NM_178700.4	Grsf1	NP_848815.2	ILMN_2608602	004890598	S	2262	AGATAGGGAAAACAATCTAAGTCCCCTCGTTTGCTTTTCCAGTGGGGTAG				5qE1	Mus musculus G-rich RNA sequence binding factor 1 (Grsf1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	BB232551; D5Wsu31e; B130010H02; C80280	BB232551; D5Wsu31e; B130010H02; C80280
Mus musculus	RefSeq	ILMN_234018	ILMN_234018	ATP8A1	NM_001038999.1	NM_001038999.1		11980	84781801	NM_001038999.1	Atp8a1	NP_001034088.1	ILMN_3055741	006290521	I	681	GGGGAGATAGTGAAGGTGACCAATGGGGAACACCTCCCGGCAGATCTCCT	5	-	68170213-68170262	5qC3.1	Mus musculus ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 (Atp8a1), transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	AW743152; B230107D19Rik; mKIAA4233; APLT; AI853962; KIAA4233; Class I; AW822227; AI481521; Atp3a2	AW743152; B230107D19Rik; mKIAA4233; APLT; AI853962; KIAA4233; Class I; AW822227; AI481521; Atp3a2
Mus musculus	RefSeq	ILMN_185982	ILMN_185982	USP5	NM_013700.1	NM_013700.1		22225	7305618	NM_013700.1	Usp5	NP_038728.1	ILMN_1253666	006330746	S	2683	GGGACGGCTGAGGGATGGACTTCAGCCCCTGCTCTGTACCCTTTTTGTTT	6	-	124768692-124768694:124769391-124769437	6qF2	Mus musculus ubiquitin specific peptidase 5 (isopeptidase T) (Usp5), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Ucht; AA407472; ISOT-1; ISOT	Ucht; AA407472; ISOT-1; ISOT
Mus musculus	MEEBO	ILMN_190698	ILMN_190698	SCL000951.1_9	scl000951.1_9	BC058776.1			37590146	BC058776.1	scl000951.1_9		ILMN_2472486	004810427	S	3	CCAACTGTGTTTGACTTGGAGAAGGAAGGTCCTGGAAACACCTGCATGGT										
Mus musculus	Riken	ILMN_206685	ILMN_206685	RSDR1-PENDING	ri|E030029G08|PX00318I20|AK087137|1783					AK087137	Rsdr1-pending		ILMN_1225125	003610187	S	669	AGCAAGACTGATGCTCAGAAAGGCCATGTGGCTGGTGGTTGCGGAGCCTG										
Mus musculus	Riken	ILMN_205713	ILMN_205713	C630016C03RIK	ri|C630016C03|PX00084C03|AK049950|1418					AK049950	C630016C03Rik		ILMN_1240151	002570634	S	955	GGTGCAAGGTGTATCTCAAAAAGGGCTCCCAAGAGTCAGCCATGCATCTG										
Mus musculus	RefSeq	ILMN_223465	ILMN_223465	KIN	NM_025280.2	NM_025280.2		16588	118130378	NM_025280.2	Kin	NP_079556.1	ILMN_1232589	000380390	S	805	CATGGAGCTCGAAGAGGAAAAGAAAAGGACCGCACGGACAGACGCCTGGT	2	+	10013754-10013803	2qA1	Mus musculus antigenic determinant of rec-A protein (Kin), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]	Kin17	Kin17
Mus musculus	RefSeq	ILMN_217824	ILMN_217824	HSH2D	NM_197944.1	NM_197944.1		209488	37537545	NM_197944.1	Hsh2d	NP_922935.1	ILMN_1239119	006280201	S	1032	CGCCCCTGGGTACTGATAGAACTTTCTGTATCTTGGGTATTCCTCATCTC	8	+	74724664-74724679:74724680-74724713	8qB3.3	Mus musculus hematopoietic SH2 domain containing (Hsh2d), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IDA]	Hsh2; ALX	Hsh2; ALX
Mus musculus	Riken	ILMN_201649	ILMN_201649	ZNFN1A3	ri|1110038C16|R000018E07|AK004152|863					AK004152	Znfn1a3		ILMN_1225747	001440537	S	564	GGGACCTTTTGAGTGGCCTGAAGCAGGGTGATTACAGAGTGCGACCGAGC										
Mus musculus	RefSeq	ILMN_212193	ILMN_212193	PRCC	NM_033573.1	NM_033573.1		94315	15809011	NM_033573.1	Prcc	NP_291051.1	ILMN_2773705	000130279	S	1356	CGGACCCGGCTCTGGTCCCTCCCCAGGAAATTGCCCCTGCATGCCTCCTT	3	-	87671248-87671297	3qF1	Mus musculus papillary renal cell carcinoma (translocation-associated) (Prcc), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212193	ILMN_212193	PRCC	NM_033573.1	NM_033573.1		94315	15809011	NM_033573.1	Prcc	NP_291051.1	ILMN_1216633	005700477	S	1364	GCTCTGGTCCCTCCCCAGGAAATTGCCCCTGCATGCCTCCTTCATTGATG	3	-	87671240-87671289	3qF1	Mus musculus papillary renal cell carcinoma (translocation-associated) (Prcc), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_216974	ILMN_216974	FBXO38	NM_134136.1	NM_134136.1		107035	29789360	NM_134136.1	Fbxo38	NP_598897.1	ILMN_2955755	004490215	S	3940	GACGTCATTTGAAGGCAGGCAAATCGTTTAGCAGTGGTCGTGTTCTTTTC	18	-	62629807-62629856	18qE1	Mus musculus F-box protein 38 (Fbxo38), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AU044865; 6030410I24Rik; Moka; SP329; AW214031	AU044865; 6030410I24Rik; Moka; SP329; AW214031
Mus musculus	MEEBO	ILMN_188167	ILMN_188167	TAF7	scl51501.2_357				6755711	NM_011901	Taf7		ILMN_2450346	006220576	S	3	GGTGCTGGGCCTTGGGAACACTAGGCAATTGCTCTGTCACTGATTAGTAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence IDA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218510	ILMN_218510	GYPA	NM_010369.3	NM_010369.3		14934	111185917	NM_010369.3	Gypa	NP_034499.3	ILMN_2696696	001980519	S	1387	GAACTCAGAGGCTTTGTGGCTATACTGCTGCCGTTCCTTTGTAGAAAAAC	8	+	83034244-83034293	8qC2	Mus musculus glycophorin A (Gypa), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [evidence IMP]; Any process that modulates the rate or extent of the response to osmotic stress [goid 47484] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	GPA; CD235a; AI853584	GPA; CD235a; AI853584
Mus musculus	RefSeq	ILMN_197158	ILMN_197158	LOC226416	XM_129460.4	XM_129460.4			38074355	XM_129460.4	LOC226416		ILMN_2527125	007610021	S	654	GGTTGTTGGAGCTGGCAAAGTCACCAAGTCTGCCCAGAAAGCTCAGAAGG										
Mus musculus	RefSeq	ILMN_209385	ILMN_209385	HNRPM	NM_029804.2	NM_029804.2		76936	141803569	NM_029804.2	Hnrpm	NP_084080.1	ILMN_1239021	006130692	S	2147	GCCGGATGATGAATGGCATGAAGCTGAGTGGCCGAGAGATTGATGTTCGA	17	-	33783458-33783507	17qB1	Mus musculus heterogeneous nuclear ribonucleoprotein M (Hnrpm), mRNA.				mKIAA4193; 2610023M21Rik; KIAA4193; AA409009	mKIAA4193; 2610023M21Rik; KIAA4193; AA409009
Mus musculus	RefSeq	ILMN_197068	ILMN_222437	2610204M08RIK	NM_198411.2	NM_198411.2		70435	114052808	NM_198411.2	2610204M08Rik	NP_940803.2	ILMN_1230634	000580170	S	1180	GGACAAGGCCCACAAGAGTGTCCAGACCAACTCAGTCCAGAATCAGGGCA	12	+	113842298-113842347	12qF1	Mus musculus RIKEN cDNA 2610204M08 gene (2610204M08Rik), mRNA.				AA589465; EG629699; MGC143801; MGC107363; Inf2; AW125550; MGC143802	AA589465; EG629699; MGC143801; MGC107363; Inf2; AW125550; MGC143802
Mus musculus	RefSeq	ILMN_222437	ILMN_222437	2610204M08RIK	NM_198411.2	NM_198411.2		70435	114052808	NM_198411.2	2610204M08Rik	NP_940803.2	ILMN_2749595	002370630	S	4204	CGGGAGCCTCCTGCCTGGCTCTAGGGAGATGGATCACAGACACCTGCACT	12	+	113853371-113853420	12qF1	Mus musculus RIKEN cDNA 2610204M08 gene (2610204M08Rik), mRNA.				AA589465; EG629699; MGC143801; MGC107363; Inf2; AW125550; MGC143802	AA589465; EG629699; MGC143801; MGC107363; Inf2; AW125550; MGC143802
Mus musculus	RefSeq	ILMN_219221	ILMN_219221	TPSAB1	NM_031187.2	NM_031187.2		17230	31981623	NM_031187.2	Tpsab1	NP_112464.2	ILMN_2705860	005130553	S	1073	TCCCAATTCTTCTGCCTTCCACTCAAGTAGCTACACTGCGCAGGCGCCGC	17	-	25480223-25480272	17qA3.3	Mus musculus tryptase alpha/beta 1 (Tpsab1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MMCP-7; Mcpt7; Mcp-7	MMCP-7; Mcpt7; Mcp-7
Mus musculus	RefSeq	ILMN_209134	ILMN_260058	RSAD1	NM_001013381.1	NM_001013381.1		237926	71480061	NM_001013381.1	Rsad1	NP_001013399.1	ILMN_2592861	000520709	S	3088	GTCCCATCGCCTGATAATCATTTGACCAGTGACTTTAGCACCTACTAGTG	11	-	94402117-94402166	11qD	Mus musculus radical S-adenosyl methionine domain containing 1 (Rsad1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: coproporphyrinogen-III + O2 + 2 H+ = protoporphyrinogen-IX + 2 CO2 + 2 H2O [goid 4109] [evidence IEA]	RP23-402D13.3; B430319G23; BC056485	RP23-402D13.3; B430319G23; BC056485
Mus musculus	RefSeq	ILMN_260058	ILMN_260058	RSAD1	NM_001013381.1	NM_001013381.1		237926	71480061	NM_001013381.1	Rsad1	NP_001013399.1	ILMN_2802168	007160300	S	3974	GCCCCCCACTCTACCCTGGGGAACTTGGATCCTCTTCAGAACCCTACCAT	11	-	94401231-94401280	11qD	Mus musculus radical S-adenosyl methionine domain containing 1 (Rsad1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: coproporphyrinogen-III + O2 + 2 H+ = protoporphyrinogen-IX + 2 CO2 + 2 H2O [goid 4109] [evidence IEA]	RP23-402D13.3; B430319G23; BC056485	RP23-402D13.3; B430319G23; BC056485
Mus musculus	RefSeq	ILMN_188505	ILMN_261574	LYZ2	NM_017372.3	NM_017372.3		17105	148747322	NM_017372.3	Lyz2	NP_059068.1	ILMN_1252076	000830240	S	133	ATGGCTGGCTACTATGGAGTCAGCCTGGCCGACTGGGTGTGTTTAGCTCA				10qD2	Mus musculus lysozyme 2 (Lyz2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism [goid 50829] [evidence IDA]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IDA]	Lys; Lzm; Lzp; Lzm-s1; AI326280	Lys; Lzm; Lzp; Lzm-s1; AI326280
Mus musculus	RefSeq	ILMN_210897	ILMN_210897	PFN3	NM_029303.2	NM_029303.2		75477	106506691	NM_029303.2	Pfn3	NP_083579.1	ILMN_2610314	006380403	S	471	GTGCTCTTAGTAGGACAGCTAGACCGCCCGTGGTTGGTAGGGAGACCAGA	13	-	55516073-55516113:55516114-55516122	13qB1	Mus musculus profilin 3 (Pfn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]; Catalysis of the reaction: ATP(out) + ADP(in) = ATP(in) + ADP(out) [goid 5471] [evidence TAS]	1700012P12Rik	1700012P12Rik
Mus musculus	RefSeq	ILMN_188734	ILMN_253745	NFYB	NM_010914.2	NM_010914.2		18045	70909330	NM_010914.2	Nfyb	NP_035044.1	ILMN_2718600	000360168	S	892	GCAGAGGCATGGGCGGAAGTGAGGGTGAAGCTGCCTCCTTGTACCATAAG	10	-	82213055-82213104	10qC1	Mus musculus nuclear transcription factor-Y beta (Nfyb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Cbf-A; AA985999	Cbf-A; AA985999
Mus musculus	RefSeq	ILMN_215431	ILMN_215431	REL	NM_009044.2	NM_009044.2		19696	112181203	NM_009044.2	Rel	NP_033070.2	ILMN_2659408	002470392	S	1911	GGCCTGATGAATGAGCCTGGACTATCAGATGACGCAAATAATCCTACCTT	11	-	23642352-23642401	11qA3.2	Mus musculus reticuloendotheliosis oncogene (Rel), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	c-Rel	c-Rel
Mus musculus	RefSeq	ILMN_221818	ILMN_221818	F2R	NM_010169.3	NM_010169.3		14062	133892391	NM_010169.3	F2r	NP_034299.2	ILMN_2740852	003990053	S	3129	TAACTTGGTTCCGGTGTTGGCTGATCTCAATTACTGACTCCCTGTCCCGT	13	-	96371861-96371910	13qD1	Mus musculus coagulation factor II (thrombin) receptor (F2r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any process that modulates the frequency, rate, or extent of interleukin-1 beta production [goid 32651] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism [goid 16265] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of blood coagulation [goid 30194] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with thrombin to initiate a change in cell activity [goid 15057] [evidence IEA]	Cf2r; Par1; AI482343; ThrR; MGC28086	Cf2r; Par1; AI482343; ThrR; MGC28086
Mus musculus	RefSeq	ILMN_217653	ILMN_217653	C230071H18RIK	NM_207265.2	NM_207265.2		399569	141803075	NM_207265.2	C230071H18Rik	NP_997148.1	ILMN_1223511	004920600	S	2077	CGGCTGCACTCTATGGTGTATTGCAAACTACCTGGGTAGGCTCAGTCTAG	2	+	93033284-93033322:93033323-93033333	2qE1	Mus musculus RIKEN cDNA C230071H18 gene (C230071H18Rik), mRNA.					
Mus musculus	Riken	ILMN_205331	ILMN_205331	A330074K22RIK	ri|A330074K22|PX00132J10|AK039624|2490					AK039624	A330074K22Rik		ILMN_2571740	002070653	S	2433	TTTCTGTGCTGGCTCCAAATGCAGAGGAACCCACTGGCGGAGGAGATAGC										
Mus musculus	RefSeq	ILMN_191856	ILMN_191856	WNT5B	NM_009525.2	NM_009525.2		22419	31560626	NM_009525.2	Wnt5b	NP_033551.1	ILMN_1224193	005080608	S	1688	GGAGCCAGCTTTGGGAAGGGGCTCTGTACTTCCTTCTTTTCTCATCTGAG	6	-	119382928-119382977	6qF1	Mus musculus wingless-related MMTV integration site 5B (Wnt5b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Wnt-5b; AW545702	Wnt-5b; AW545702
Mus musculus	RefSeq	ILMN_197069	ILMN_197069	LOC380790	XM_354699.1	XM_354699.1			38073765	XM_354699.1	LOC380790		ILMN_1256120	003830541	S	4374	GCCTCGGAACCGTGAGGAGGCACGGTCCTTCCAGGTGATCTTTGATAATC										
Mus musculus	RefSeq	ILMN_215730	ILMN_215730	REG3G	NM_011260.1	NM_011260.1		19695	6755309	NM_011260.1	Reg3g	NP_035390.1	ILMN_2662934	000830619	S	514	ATTGTAACTTAGAGTTACCCTATGTCTGCAAATTCAAGGCCTAGAGTACA	6	-	78416472-78416478:78416479-78416521	6qC3	Mus musculus regenerating islet-derived 3 gamma (Reg3g), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI449515	AI449515
Mus musculus	RefSeq	ILMN_219580	ILMN_219580	OLFR202	NM_146995.1	NM_146995.1		258997	22128950	NM_146995.1	Olfr202	NP_667206.1	ILMN_2710799	007610070	S	809	AGGAACAACTGTTATCTATAGTTTACACAATAATAATCCCATTGCTCAAC	16	-	59283463-59283512	16qC1.3	Mus musculus olfactory receptor 202 (Olfr202), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR182-1	MOR182-1
Mus musculus	RefSeq	ILMN_212720	ILMN_212720	ATP9A	NM_015731.3	NM_015731.3		11981	118130946	NM_015731.3	Atp9a	NP_056546.2	ILMN_1255220	000670414	S	3140	TCAAGTACCTGCGGAGACGGTTCTCCCCACCCAGCTACTCGAAGCTCACT	2	-	168460277-168460326	2qH3	Mus musculus ATPase, class II, type 9A (Atp9a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA0611; IIa	mKIAA0611; IIa
Mus musculus	RefSeq	ILMN_212720	ILMN_212720	ATP9A	NM_015731.3	NM_015731.3		11981	118130946	NM_015731.3	Atp9a	NP_056546.2	ILMN_2629528	001510364	S	2087	ACAAGCTGGAGACAGCCACGTGCACAGCCAAGAACGCACATCTGGTGACC	2	-	168475058-168475107	2qH3	Mus musculus ATPase, class II, type 9A (Atp9a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA0611; IIa	mKIAA0611; IIa
Mus musculus	RefSeq	ILMN_218130	ILMN_218130	ASCL3	NM_020051.1	NM_020051.1		56787	9910133	NM_020051.1	Ascl3	NP_064435.1	ILMN_2691996	005270372	S	619	CCGCAGCCAGTACATTCTCATACACATGGTTTCGAGGACACAACAGTACC	7	-	116871016-116871065	7qE3	Mus musculus achaete-scute complex homolog 3 (Drosophila) (Ascl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MGC129412; Sgn1; MGC129413	MGC129412; Sgn1; MGC129413
Mus musculus	Riken	ILMN_206819	ILMN_206819	D930024H10RIK	ri|D930024H10|PX00202K01|AK086373|1763					AK086373	D930024H10Rik		ILMN_2582914	005050189	S	1306	GGTTTTGGTTTTATTGTAGTGGTGGTTTGCTTGTTTGGGGGTAGGGGTTG										
Mus musculus	RefSeq	ILMN_197927	ILMN_197927	LOC381035	XM_354944.1	XM_354944.1			38079700	XM_354944.1	LOC381035		ILMN_1246319	003420274	S	287	CCGAAACAGATAGTTACTTTAATCTACGGGGTGACCAGTGGGTGAGCACA										
Mus musculus	RefSeq	ILMN_213483	ILMN_213483	NANOS2	NM_194064.2	NM_194064.2		378430	154090994	NM_194064.2	Nanos2	NP_918953.2	ILMN_2637484	003190524	S	1329	GGGGCAGAGAAGAATGCCAGTTGGGTTTTATGCTATCTAGGAGGTTGGCT				7qA3	Mus musculus nanos homolog 2 (Drosophila) (Nanos2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	nos2	nos2
Mus musculus	Riken	ILMN_204273	ILMN_204273	2410013I23RIK	ri|9630024P07|PX00115F18|AK035985|2014					AK035985	2410013I23Rik		ILMN_2563716	002000095	S	1578	GCGCTCTATCTGGTTCCAACAGCTACTGCTTGCCTTAACAATGGTCTTGC										
Mus musculus	Riken	ILMN_202303	ILMN_202303	4933432B13RIK	ri|4933432B13|PX00021K04|AK017018|1850					AK017018	4933432B13Rik		ILMN_2548550	000990470	S	1172	TGGCCTGTTTCCAGGGTCGAGCAGAAGTAGTGAGTTTGCTTTTGGACCGC										
Mus musculus	Riken	ILMN_202109	ILMN_202109	2810405J23RIK	ri|2810405J23|ZX00066A01|AK012998|1301					AK012998	2810405J23Rik		ILMN_1221827	004920315	S	1212	CTAGAGCATCTGGGGCCTTCATCTGGCGTCCACAGGCACCTTCACACATG										
Mus musculus	RefSeq	ILMN_218879	ILMN_218879	NANOS1	NM_178421.3	NM_178421.3		332397	84872195	NM_178421.3	Nanos1	NP_848508.2	ILMN_2701355	001440424	S	2000	AAAAGGTTCTACTCTGGGCTGTTTGCCTTTCAATTTACAGAGGGTGTGCC	19	+	60833889-60833938	19qD3	Mus musculus nanos homolog 1 (Drosophila) (Nanos1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_227954	ILMN_227954	RPL27	NM_011289.1	NM_011289.1		19942	8567399	NM_011289.1	Rpl27	NP_035419.1	ILMN_2999797	003940477	S	22	TTCCTTTCTGCTGGGTGCCGGCTGCCTGCTGTCGAGATGGGCAAGTTCAT	11	+	101258526-101258546:101258813-101258814:101258815-101258841	11qD	Mus musculus ribosomal protein L27 (Rpl27), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC103134	MGC103134
Mus musculus	MEEBO	ILMN_186711	ILMN_186711	COL4A5	scl54578.51_466				33468850	NM_007736	Col4a5		ILMN_2734755	006620563	S	5435	AGATGTACCTCAGCAATGTGCCAGAGCAAGGGCTCCATCCTTCCTTATGA						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IDA]				
Mus musculus	RefSeq	ILMN_216613	ILMN_216613	SACS	NM_172809.3	NM_172809.3		50720	142370978	NM_172809.3	Sacs	NP_766397.2	ILMN_1227736	003190167	S	2812	CCCCTTCTCCTCGTCTGTCTCTGATCAAGATGTTGTTTACATCACCTCAG	14	+	61811367-61811416	14qD1	Mus musculus sacsin (Sacs), mRNA.			Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	A230052M14; mKIAA0730; KIAA0730; E130115J16Rik	A230052M14; mKIAA0730; KIAA0730; E130115J16Rik
Mus musculus	RefSeq	ILMN_205542	ILMN_216613	SACS	NM_172809.3	NM_172809.3		50720	142370978	NM_172809.3	Sacs	NP_766397.2	ILMN_1226346	007000725	S	1190	GGAACGGAGACTCTTTGGTCGAAAGATATGGCACAATATCAGGGCTCAGC	14	+	61802858-61802900:61808439-61808445	14qD1	Mus musculus sacsin (Sacs), mRNA.			Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	A230052M14; mKIAA0730; KIAA0730; E130115J16Rik	A230052M14; mKIAA0730; KIAA0730; E130115J16Rik
Mus musculus	RefSeq	ILMN_214590	ILMN_214590	GSTP1	NM_013541.1	NM_013541.1		14870	10092607	NM_013541.1	Gstp1	NP_038569.1	ILMN_2793329	004290040	S	367	CCTCATCTACACCAACTATGAGAATGGTAAGAATGACTACGTGAAGGCCC	19	-	4035900-4035931:4036688-4036705	19qA	Mus musculus glutathione S-transferase, pi 1 (Gstp1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IDA]	GstpiB	GstpiB
Mus musculus	RefSeq	ILMN_214590	ILMN_214590	GSTP1	NM_013541.1	NM_013541.1		14870	10092607	NM_013541.1	Gstp1	NP_038569.1	ILMN_1223230	005290358	S	335	GGGGTGGAGGACCTTCGCGGCAAATATGTCACCCTCATCTACACCAACTA	19	-	4036688-4036737	19qA	Mus musculus glutathione S-transferase, pi 1 (Gstp1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IDA]	GstpiB	GstpiB
Mus musculus	RefSeq	ILMN_214590	ILMN_214590	GSTP1	NM_013541.1	NM_013541.1		14870	10092607	NM_013541.1	Gstp1	NP_038569.1	ILMN_2677046	001510035	S	29	CTGAATCCGCACCCAGCAGGCATGCCACCATACACCATTGTCTACTTCCC	19	-	4037592-4037620:4037863-4037863:4037864-4037883	19qA	Mus musculus glutathione S-transferase, pi 1 (Gstp1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IDA]	GstpiB	GstpiB
Mus musculus	MEEBO	ILMN_214648	ILMN_214648	MSCP	scl000296.1_62	NM_030054.2			33465826	NM_030054.2	Mscp		ILMN_2696609	002760475	S	5564	ACCCTCCAGTGTCACCCCCAAGGCTATATCTCCAACATACTGCTATGCCA										
Mus musculus	MEEBO	ILMN_194507	ILMN_194507	4930483J18RIK	scl47714.3_111				13385783	NM_026288	4930483J18Rik		ILMN_2507040	006370537	S	7	AGCCCTAATAAAATTATATGTTCAATAACTATATATGCTATATAAATAAA										
Mus musculus	MEEBO	ILMN_194507	ILMN_194507	4930483J18RIK	scl47714.3_111				13385783	NM_026288	4930483J18Rik		ILMN_1250140	003520605	S	734	CTCTGAGTGAGTTACTCTGTATGGCTTCCGTTCTCCCCCGGAAATCTCCC										
Mus musculus	RefSeq	ILMN_197976	ILMN_197976	LOC224097	XM_156004.2	XM_156004.2			38079928	XM_156004.2	LOC224097		ILMN_1234474	004780348	S	159	GCTTGAAGTGAATGGTTCCCACAAAGAAGAGCGGCAAGAAGAAGGGGCCA										
Mus musculus	Riken	ILMN_207332	ILMN_207332	5730437O09RIK	ri|5730437O09|PX00644K01|AK077526|3648					AK077526	5730437O09Rik		ILMN_1249471	006510138	S	3590	GTCCTCTGACCACTGTCGGCCACGGAACATGCATCCCACACACACTTACA										
Mus musculus	RefSeq	ILMN_192500	ILMN_251641	SLMAP	NM_032008.3	NM_032008.3		83997	56605991	NM_032008.3	Slmap	NP_114397.3	ILMN_2488662	006900228	S	2619	CCAGCCGTTTTCATCGGCCTATTCCTGGCTTTCCTGTTTTGGTGTTTCGG	14	-	27235707-27235756	14qA3	Mus musculus sarcolemma associated protein (Slmap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	mKIAA1601; KIAA1601; Slap; D330001L02Rik	mKIAA1601; KIAA1601; Slap; D330001L02Rik
Mus musculus	RefSeq	ILMN_187361	ILMN_251641	SLMAP	NM_032008.3	NM_032008.3		83997	56605991	NM_032008.3	Slmap	NP_114397.3	ILMN_1249227	006580239	S	1685	GGCCAAACAAGACATTCAGCATCTTCGCAAAGAATTGGTGGAAGCCCAGG	14	-	27249315-27249364	14qA3	Mus musculus sarcolemma associated protein (Slmap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	mKIAA1601; KIAA1601; Slap; D330001L02Rik	mKIAA1601; KIAA1601; Slap; D330001L02Rik
Mus musculus	RefSeq	ILMN_187361	ILMN_251641	SLMAP	NM_032008.3	NM_032008.3		83997	56605991	NM_032008.3	Slmap	NP_114397.3	ILMN_1224516	006270544	S	4225	AATACTGTCGTATAGTTCATTTTACCATTCTCTGTTGCAGGAAGCCACCC	14	-	27232887-27232936	14qA3	Mus musculus sarcolemma associated protein (Slmap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	mKIAA1601; KIAA1601; Slap; D330001L02Rik	mKIAA1601; KIAA1601; Slap; D330001L02Rik
Mus musculus	RefSeq	ILMN_240485	ILMN_240485	A230069A22RIK	NM_001033394.1	NM_001033394.1		320587	85701894	NM_001033394.1	A230069A22Rik	NP_001028566.1	ILMN_2832282	007200224	S	1350	CAGTTACCGGCAGGTGCGAGCTGCAATGTGGGTTCTAGGACTGCAACCTG	4	-	154627462-154627511	4qE2	Mus musculus RIKEN cDNA A230069A22 gene (A230069A22Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_212441	ILMN_212441	GSTM1	scl0014862.1_58	NM_010358.2			24475914	NM_010358.2	Gstm1		ILMN_2626491	004540458	S	72	CAGGGTTGGGAGGGACCCGCTGTTTTGTCCTGCCCACGTTTCTCTAGTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]		
Mus musculus	RefSeq	ILMN_237297	ILMN_237297	KCNK1	NM_008430.1	NM_008430.1		16525	6680537	NM_008430.1	Kcnk1	NP_032456.1	ILMN_3009501	001450608	S	2061	GGAAGGCATACCACCACTTCTACCCACTTCACAGGTCTGGAGGGCATACC	8	+	128554411-128554460	8qE2	Mus musculus potassium channel, subfamily K, member 1 (Kcnk1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IC ]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IDA]	TWIK-1; AI788889	TWIK-1; AI788889
Mus musculus	RefSeq	ILMN_227331	ILMN_227331	OLFR1437	NM_001011839.1	NM_001011839.1		258117	58801437	NM_001011839.1	Olfr1437	NP_001011839.1	ILMN_2844418	006510709	S	447	CTACACAGCAGGAATCATGGGTTCTCTATCTCAGGTGTGTGCCTTGCTGC	19	-	12396819-12396868	19qA	Mus musculus olfactory receptor 1437 (Olfr1437), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR214-6	MOR214-6
Mus musculus	Riken	ILMN_205593	ILMN_205593	9530081N05RIK	ri|9530081N05|PX00113B14|AK035655|2329					AK035655	9530081N05Rik		ILMN_1231714	006280689	S	1707	GGCCATGGTCCACTTCAGGGAAGACTGCAATAGTTTCTTACAAGAGTGAA										
Mus musculus	MEEBO	ILMN_186334	ILMN_186334	5430439G14RIK	scl0071389.1_322				51706499	XM_485094	5430439G14Rik		ILMN_2434648	001570152	S	15	ACATTATATTCTGCACTGCCTTCAGGAGACCCGGCACCTTCTCACCCCCA										
Mus musculus	RefSeq	ILMN_255439	ILMN_255439	ABCC9	NM_021042.2	NM_021042.2		20928	113722104	NM_021042.2	Abcc9	NP_066379.2	ILMN_3104271	002710672	A	7045	GAGTAAGGATCGCTTTCCTCAAAGGTTACCCTCCCACCCCCGCTATTTCT	6	-	142536720-142536769	6qG2	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	AI414027; AI449286; SUR2B; Sur2; SUR2A	AI414027; AI449286; SUR2B; Sur2; SUR2A
Mus musculus	MEEBO	ILMN_195499	ILMN_195499	A930039N10RIK	scl0320303.1_35						A930039N10Rik		ILMN_2516124	001450746	S	12	GTAGGTAGGCCTCTTTTTCTGAATCTGCTCCCTAATGCAGTATCCCATGC										
Mus musculus	RefSeq	ILMN_194580	ILMN_245988	C2CD2L	NM_027909.2	NM_027909.2		71764	88900514	NM_027909.2	C2cd2l	NP_082185.2	ILMN_1230395	003840221	S	3241	AAGACAGTACGATCATAGAGCAAGGTTGCACCTCTGTATGTTGGGAGATG	9	-	44118363-44118412	9qA5.2	Mus musculus C2 calcium-dependent domain containing 2-like (C2cd2l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1300006O23Rik	1300006O23Rik
Mus musculus	MEEBO	ILMN_221771	ILMN_221771	B230325K18RIK	scl32012.1.1_330	NM_176936.2			31342418	NM_176936.2	B230325K18Rik		ILMN_1232288	003780243	S	2551	GCTGTGCTCATTTTCCCCTATGTGAAGTGGCATATGAGCATTAACCACAG										
Mus musculus	Riken	ILMN_202723	ILMN_202723	TOR2A	ri|2810027E19|ZX00064P24|AK019246|333					AK019246	Tor2a		ILMN_1241588	005720707	S	127	AATGCGACTTCTGGCCCGACTTGCCGGGACCCAGCCCCCAGCAAGCCGTT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_196499	ILMN_328403	LOC100048534	XM_001480785.1	XM_001480785.1		100048534	149270806	XM_001480785.1	LOC100048534	XP_001480835.1	ILMN_1225781	002570202	S	1666	GCTGACCTGTGAGAAGATTGCTAGAGAACGCTACGACAACCAGCTGAAGC					PREDICTED: Mus musculus similar to D19Ertd652e protein (LOC100048534), mRNA.					
Mus musculus	MEEBO	ILMN_215182	ILMN_215182	OLFR1203	scl0258898.1_244				22129094	NM_146896	Olfr1203		ILMN_2772565	007040301	S	769	GCACGTCCACCAACTACTTTTTCTATGGACAAGATGGTAACAGTATTTTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_214274	ILMN_249275	MUP5	XM_981727.1	XM_981727.1		17844	94371967	XM_981727.1	Mup5	XP_986821.1	ILMN_1226884	000460711	S	66	TTCTGAGAGACAGAACTTTAATGTAGAAAAGATTAATGGAAAATGGTTTT				4qB3	PREDICTED: Mus musculus major urinary protein 5 (Mup5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_205898	ILMN_205898	BOC	ri|A730090B12|PX00153I13|AK043379|2664					AK043379	Boc		ILMN_1227184	005270546	S	2229	GGGGTCAGGTAGGGCTGGAACTGAGGCTGGAAAAGTCTGTGAGTGGAATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence TAS]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45663] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence TAS]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IDA]; Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence ISO]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209530	ILMN_209530	GPR35	NM_022320.2	NM_022320.2		64095	31560293	NM_022320.2	Gpr35	NP_071715.2	ILMN_2940484	006550176	S	2880	CCTTCCTCTGGTAACCTCAGCTTTAGGGGAAAATCCCACGCCCCCACAGG	1	+	94815662-94815711	1qD	Mus musculus G protein-coupled receptor 35 (Gpr35), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	KPG_007	KPG_007
Mus musculus	RefSeq	ILMN_209530	ILMN_209530	GPR35	NM_022320.2	NM_022320.2		64095	31560293	NM_022320.2	Gpr35	NP_071715.2	ILMN_2940487	004590241	S	2704	ACGCCTCTAGACTACAACAGCAGACAACTATTCTAAGTAGCTTGCCGGTG	1	+	94815486-94815535	1qD	Mus musculus G protein-coupled receptor 35 (Gpr35), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	KPG_007	KPG_007
Mus musculus	RefSeq	ILMN_191407	ILMN_242384	2210010L05RIK	NM_133829.1	NM_133829.1		98682	19527045	NM_133829.1	2210010L05Rik	NP_598590.1	ILMN_2612238	004180333	S	1896	GGCCCCAACCCTGACCATGCCTCTACAAGGGGGTCACTGCAATGCATATG	1	-	52715081-52715130	1qC1.1	Mus musculus RIKEN cDNA 2210010L05 gene (2210010L05Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI836200; 9630025I22Rik; MMR2; AW212394	AI836200; 9630025I22Rik; MMR2; AW212394
Mus musculus	Riken	ILMN_202014	ILMN_202014	2610020J05RIK	ri|2610020J05|ZX00045I09|AK011488|2017					AK011488	2610020J05Rik		ILMN_1236169	005090136	S	1555	CCATTGGCTAACTGCTGTGTATTCTTACCCTTGTTTCTCCTTAGCATGGC										
Mus musculus	RefSeq	ILMN_225038	ILMN_225038	4930404N11RIK	NM_001014836.1	NM_001014836.1		432479	62460383	NM_001014836.1	4930404N11Rik	NP_001014836.1	ILMN_2898729	000990441	S	63	CTCTACTTCCCCGACCATCTCTACCGCAATGACTACGTGTCCCTGGAGGG	10	-	80768084-80768109:80768833-80768856	10qC1	Mus musculus RIKEN cDNA 4930404N11 gene (4930404N11Rik), mRNA.				AI854616; 2210409H10Rik; 5730551K18Rik	AI854616; 2210409H10Rik; 5730551K18Rik
Mus musculus	RefSeq	ILMN_216472	ILMN_216472	DCLRE1C	NM_146114.1	NM_146114.1		227525	22122632	NM_146114.1	Dclre1c	NP_666226.1	ILMN_2671460	006560128	S	1486	GCCCCTCGACACTCGTCCAGCAAAATGCTGATCCGGATGTGGACATACCA	2	+	3370381-3370430	2qA1	Mus musculus DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) (Dclre1c), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end [goid 8409] [evidence ISA]; Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks [goid 14] [evidence ISO]	MGC123409; Snm1l; 9930121L06Rik; AI661365	MGC123409; Snm1l; 9930121L06Rik; AI661365
Mus musculus	RefSeq	ILMN_195246	ILMN_329202	LOC100047090	XR_031968.1	XR_031968.1		100047090	149275004	XR_031968.1	LOC100047090		ILMN_1258218	001090358	S	2386	CCCTGGAAGACTATGTCGTGGTCCAGTGCAAGGACTGTAGGTTCTGTACC					PREDICTED: Mus musculus similar to VIP2 receptor for vasoactive intestinal peptide (VIP) (LOC100047090), misc RNA.					
Mus musculus	RefSeq	ILMN_210020	ILMN_210020	NEIL3	NM_146208.1	NM_146208.1		234258	22122758	NM_146208.1	Neil3	NP_666320.1	ILMN_1246104	003120315	S	1970	GCATTCAGTCCCCTTTGTTTAATAGAAAACTTATAGAACACCTGTTGTAC	8	-	54672384-54672433	8qB1.3	Mus musculus nei like 3 (E. coli) (Neil3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of any N-glycosyl bond [goid 16799] [evidence IEA]	MGC27861; MGC36916; AI449477; BC034753; C85903	MGC27861; MGC36916; AI449477; BC034753; C85903
Mus musculus	Riken	ILMN_203940	ILMN_203940	A330027C19RIK	ri|A330027C19|PX00131A22|AK039339|1044					AK039339	A330027C19Rik		ILMN_1232670	004890035	S	695	AAGCAGGAGTCCATCTGGAGTTGTCCTGTCGTGGTGGGTGTGGACAGGCA										
Mus musculus	RefSeq	ILMN_209617	ILMN_209617	APP	NM_007471.2	NM_007471.2		11820	47271503	NM_007471.2	App	NP_031497.2	ILMN_2754314	007000170	S	2396	CCTGAACTTGAATTAATATACAAATCAGTAATGTATTCTCGCTTTCTCTC	16	-	84955363-84955412	16qC3.3	Mus musculus amyloid beta (A4) precursor protein (App), mRNA.	A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; The area in the center of the spindle where the spindle microtubules from opposite poles overlap [goid 51233] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The growth of a synapse at a neuromuscular junction, the site of apposition of a motor end plate and the subneural cleft of the skeletal muscle fiber that it innervates [goid 51124] [evidence IGI]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; The process by which outgrowths develop from the axons of intact undamaged neurons [goid 48669] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings [goid 51563] [evidence IGI]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The recognition of molecules at the central nervous system midline choice point by an axon growth cone; this choice point determines whether the growth cone will cross the midline [goid 16199] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IDA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IGI]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IGI]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence IMP]; The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IGI]; Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50803] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor, followed by the movement of ions through a channel in the receptor complex [goid 35235] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IGI]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	appican; E030013M08Rik; Cvap; Adap; betaAPP; AL024401; Abeta	appican; E030013M08Rik; Cvap; Adap; betaAPP; AL024401; Abeta
Mus musculus	RefSeq	ILMN_209617	ILMN_209617	APP	NM_007471.2	NM_007471.2		11820	47271503	NM_007471.2	App	NP_031497.2	ILMN_2791028	002070274	S	2643	GATGGGGGATGCTTCTTGTGAACGTGGGCGTCTAGCTGCTTCTCCTACGT	16	-	84955116-84955165	16qC3.3	Mus musculus amyloid beta (A4) precursor protein (App), mRNA.	A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; The area in the center of the spindle where the spindle microtubules from opposite poles overlap [goid 51233] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The growth of a synapse at a neuromuscular junction, the site of apposition of a motor end plate and the subneural cleft of the skeletal muscle fiber that it innervates [goid 51124] [evidence IGI]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; The process by which outgrowths develop from the axons of intact undamaged neurons [goid 48669] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings [goid 51563] [evidence IGI]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The recognition of molecules at the central nervous system midline choice point by an axon growth cone; this choice point determines whether the growth cone will cross the midline [goid 16199] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IDA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IGI]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IGI]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence IMP]; The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IGI]; Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50803] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor, followed by the movement of ions through a channel in the receptor complex [goid 35235] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IGI]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	appican; E030013M08Rik; Cvap; Adap; betaAPP; AL024401; Abeta	appican; E030013M08Rik; Cvap; Adap; betaAPP; AL024401; Abeta
Mus musculus	MEEBO	ILMN_223764	ILMN_223764	PSBPC1	scl00114895.1_222	NM_054069.1			16905096	NM_054069.1	Psbpc1		ILMN_2768799	007570471	S	233	GGTAGTAGCAGAAACACTGGTATACATTTTTTTGGAATGTGGTGTGAAAC										
Mus musculus	RefSeq	ILMN_209952	ILMN_209952	MTFR1	NM_026182.4	NM_026182.4		67472	142363119	NM_026182.4	Mtfr1	NP_080458.1	ILMN_2600762	002360341	S	2699	CATATTTTGACCTAAGAGTTTATATTTATATCAGTATTGAATTTGGCTAG	3	+	19119587-19119636	3qA2	Mus musculus mitochondrial fission regulator 1 (Mtfr1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			2810026O10Rik; 4930579E05Rik; 1700080D04Rik; Chppr; 1300002C08Rik	2810026O10Rik; 4930579E05Rik; 1700080D04Rik; Chppr; 1300002C08Rik
Mus musculus	Riken	ILMN_203518	ILMN_203518	1700020I14RIK	ri|5031400H20|PX00037I17|AK030275|3691					AK030275	1700020I14Rik		ILMN_2557918	001450253	S	3185	CCACTGCGCTTGGGGGAATGTTAGGCCTTTCACGGGGGAGCTAGAATAGC										
Mus musculus	RefSeq	ILMN_199108	ILMN_199108	LOC331626	XM_284871.2	XM_284871.2			38090980	XM_284871.2	LOC331626		ILMN_1234544	001410382	S	1312	GGGAAGGTGGAAGCTGAGGGCACAAGCAAAATGATGAAGGACCTAATGTC										
Mus musculus	RefSeq	ILMN_219173	ILMN_219173	BC067047	NM_177782.3	NM_177782.3		277360	124517733	NM_177782.3	BC067047	NP_808450.2	ILMN_2705235	002810678	S	5609	GTGCCCGGCTGGCTTCTAACACCCACCGCCATTGGAATTTGAGCTGTCAG	2	-	166392716-166392765	2qH3	Mus musculus cDNA sequence BC067047 (BC067047), mRNA. XM_902966 XM_902967 XM_902969 XM_914522 XM_923276 XM_923283 XM_923288 XM_923292 XM_923299 XM_923308 XM_983285	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Setd6; P-REX1; G630042G04; RP23-183N8.1	Setd6; P-REX1; G630042G04; RP23-183N8.1
Mus musculus	RefSeq	ILMN_201538	ILMN_201538	RPS6	NM_009096.2	NM_009096.2		20104	110626097	NM_009096.2	Rps6	NP_033122.1	ILMN_2893077	005550019	S	61	TTCCCCGCCACCGGCTGTCAGAAGCTCATCGAGGTGGATGACGAGCGCAA				4qC4	Mus musculus ribosomal protein S6 (Rps6), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IDA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The formation of the constituents of the small ribosomal subunit, their assembly, and their transport to the sites of protein synthesis [goid 42274] [evidence IMP]; Any cell cycle checkpoint that blocks entry into S phase [goid 31575] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IGI]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The expansion of a T cell population by cell division during an immune response [goid 2309] [evidence IGI]; The expansion of a T cell population by cell division during an immune response [goid 2309] [evidence IMP]; The process of apoptosis in activated T cells [goid 6924] [evidence IMP]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IGI]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A process that contributes to the formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 22605] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC103209; MGC102571	MGC103209; MGC102571
Mus musculus	RefSeq	ILMN_213085	ILMN_213085	OLFR1255	NM_146977.1	NM_146977.1		258979	22128978	NM_146977.1	Olfr1255	NP_667188.1	ILMN_1231865	002140762	S	838	ACTTTGGTGGCCCCTCTACTGAATCCTTTAATCTACACCCTCAGAAATTC	2	+	89657322-89657371	2qE1	Mus musculus olfactory receptor 1255 (Olfr1255), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR232-4	MOR232-4
Mus musculus	Riken	ILMN_204307	ILMN_204307	4931415K24RIK	ri|4931415K24|PX00016K06|AK029861|3695					AK029861	4931415K24Rik		ILMN_1231533	004880338	S	3423	ATGAGGTAAGACCCTGAGTGGACCAGGAAAGCAAGCCATAGCCCCTGGGC										
Mus musculus	RefSeq	ILMN_211362	ILMN_211362	FAM148C	NM_198614.2	NM_198614.2		237397	58037551	NM_198614.2	Fam148c	NP_941016.2	ILMN_2615081	003870484	S	2770	CTCTGTTTGCAGTTGACTGTACGTGAATCTTTTAAGACGCCTCCCCCAAA	10	-	79073508-79073557	10qC1	Mus musculus family with sequence similarity 148, member C (Fam148c), mRNA.				MGC86088; Gm238	MGC86088; Gm238
Mus musculus	RefSeq	ILMN_187392	ILMN_251140	KPRP	NM_028629.1	NM_028629.1		433619	113195681	NM_028629.1	Kprp	NP_082905.1	ILMN_1243551	003400689	S	2619	AGTTGAACATGGTTGTGGTTGGCAGCTTGAGTCATGTTCTGTCCTGTTGG	3	-	92627056-92627105	3qF1	Mus musculus keratinocyte expressed, proline-rich (Kprp), mRNA.				1110001M24Rik; AA589586	1110001M24Rik; AA589586
Mus musculus	RefSeq	ILMN_210547	ILMN_210547	INSIG1	NM_153526.2	NM_153526.2		231070	31542999	NM_153526.2	Insig1	NP_705746.1	ILMN_2895388	000010309	S	2239	CTACTTTGGCTAAAAGAAAATGGGTTGTGCTAGACTTTGGGACGGTTCTT	5	+	28408995-28409044	5qB1	Mus musculus insulin induced gene 1 (Insig1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating deprivation of sterols. Sterols are a group of steroids characterized by the presence of one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 6991] [evidence IDA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1810013C12Rik; Insig-1	1810013C12Rik; Insig-1
Mus musculus	RefSeq	ILMN_218228	ILMN_218228	NR1D1	NM_145434.3	NM_145434.3		217166	145301552	NM_145434.3	Nr1d1	NP_663409.2	ILMN_2749669	006580753	S	2213	TCTGGTGCTGAAGAACCGGCCCTCGGAGACTTCCCGCTTCACCAAGCTGC				11qD	Mus musculus nuclear receptor subfamily 1, group D, member 1 (Nr1d1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	A530070C09Rik; R75201	A530070C09Rik; R75201
Mus musculus	RefSeq	ILMN_214553	ILMN_214553	WDR74	NM_134139.1	NM_134139.1		107071	19527373	NM_134139.1	Wdr74	NP_598900.1	ILMN_1227712	004490168	S	856	GCCTCATGTGGCTTGGACAGAGTCTTGAGGATACACAGGATCCGCAATCC	19	+	8814386-8814435	19qA	Mus musculus WD repeat domain 74 (Wdr74), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			5730436H21Rik; AA407588	5730436H21Rik; AA407588
Mus musculus	RefSeq	ILMN_210957	ILMN_210957	IL1R2	NM_010555.4	NM_010555.4		16178	76253864	NM_010555.4	Il1r2	NP_034685.1	ILMN_2611000	003420139	S	1235	GCGCAGACGGTGTAAACGCAGGGCTGGAAAGACATATGGACTGACCAAGC	1	+	40181962-40182011	1qB	Mus musculus interleukin 1 receptor, type II (Il1r2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA];  [goid 4910] [evidence IEA]	CD121b; Il1r-2	CD121b; Il1r-2
Mus musculus	MEEBO	ILMN_212420	ILMN_212420	RRAD	scl34415.5.1_1	NM_019662.1			9790184	NM_019662.1	Rrad		ILMN_1219106	005550035	S	834	AAGGCCAAACGCTTTCTGGGCCGCATCGTGGCTCGCAACAGCCGCAAGAT							Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208681	ILMN_208681	SCYL3	NM_028776.4	NM_028776.4		240880	118130525	NM_028776.4	Scyl3	NP_083052.1	ILMN_2615601	006840441	S	1532	AGTCTTGGAGGACCCCTCGTCTAACGTATTCCCTAAATGGTTGTCTGGCA	1	+	165880745-165880794	1qH2.2	Mus musculus SCY1-like 3 (S. cerevisiae) (Scyl3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AW214499; 1200016D23Rik; Pace1; 6030457O16	AW214499; 1200016D23Rik; Pace1; 6030457O16
Mus musculus	RefSeq	ILMN_208681	ILMN_208681	SCYL3	NM_028776.4	NM_028776.4		240880	118130525	NM_028776.4	Scyl3	NP_083052.1	ILMN_2588521	001980563	S	2870	TATTACACTGGACCAAAGCTCTCAATGAGAAATACCCACCCTCATCTCCC	1	+	165884058-165884107	1qH2.2	Mus musculus SCY1-like 3 (S. cerevisiae) (Scyl3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AW214499; 1200016D23Rik; Pace1; 6030457O16	AW214499; 1200016D23Rik; Pace1; 6030457O16
Mus musculus	RefSeq	ILMN_187871	ILMN_211532	SP1	NM_013672.2	NM_013672.2		20683	119226254	NM_013672.2	Sp1	NP_038700.2	ILMN_2447846	003400634	S	7208	GCTCTTGAAAATTGTGGGTAATGGCAGTTCTTCATACTTCTGATGACTCT	15	+	102266225-102266274	15qF3	Mus musculus trans-acting transcription factor 1 (Sp1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The process by which the anatomical structures of the eye are generated and organized during embryonic development. Morphogenesis pertains to the creation of form [goid 48596] [evidence IGI]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IGI]; A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process by which a myeloid precursor cell acquires specializes features of a megakaryocyte [goid 30219] [evidence IGI]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AA450830; 1110003E12Rik; AI845540; Sp1-1	AA450830; 1110003E12Rik; AI845540; Sp1-1
Mus musculus	RefSeq	ILMN_190238	ILMN_232893	CCDC85A	NM_181577.3	NM_181577.3		216613	141801107	NM_181577.3	Ccdc85a	NP_853555.1	ILMN_2723052	004860215	S	2100	CTCCAGCTAGCTTCAGTGGACATACCACACCTTCTCAGCAGCCTGAACCT	11	-	28296063-28296112	11qA3.3	Mus musculus coiled-coil domain containing 85A (Ccdc85a), mRNA.				RP23-398G11.2; E030025D05Rik	RP23-398G11.2; E030025D05Rik
Mus musculus	Riken	ILMN_205837	ILMN_205837	A730008I18RIK	ri|A730008I18|PX00149A11|AK042590|2779					AK042590	A730008I18Rik		ILMN_1232052	007000082	S	2605	CCGGCTGCTCTTCCAGAAAACCTGGGTTCAGTTCCTAACATCCACATGGC										
Mus musculus	Riken	ILMN_207214	ILMN_207214	PK3	ri|C530045D03|PX00669J04|AK083076|2114					AK083076	Pk3		ILMN_1236323	001850068	S	1906	ACAGACTTCCAGCTGACCTGACTCCTGCTGACTGTGATGGGTGAGGACCC										
Mus musculus	Riken	ILMN_204895	ILMN_204895	A530024C08RIK	ri|A530024C08|PX00140M12|AK040772|1163					AK040772	A530024C08Rik		ILMN_1243902	005220112	S	818	AGCTAGTTCACGTCAGCCTGCACCATATCTCTTACTGATGCTGCGCCTTC										
Mus musculus	RefSeq	ILMN_220316	ILMN_220316	A230074B11RIK	NM_177334.2	NM_177334.2		215413	31341081	NM_177334.2	A230074B11Rik	NP_796308.1	ILMN_3092518	007210424	A	1530	TAGCGTTCACTTCTTGGAAGGCCCCCGTAGAGCTGGCGGTGAGGTCTGTA	1	+	37021302-37021351	1qB	Mus musculus RIKEN cDNA A230074B11 gene (A230074B11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220316	ILMN_220316	A230074B11RIK	NM_177334.2	NM_177334.2		215413	31341081	NM_177334.2	A230074B11Rik	NP_796308.1	ILMN_3020321	002320139	I	107	CTGCTCTGGTGGCTCCTTGTGACTCAGGGTCTTGATTTAGAGATGGGGGA	1	+	36973968-36973974:36980183-36980225	1qB	Mus musculus RIKEN cDNA A230074B11 gene (A230074B11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215442	ILMN_215442	SLC12A9	NM_031406.2	NM_031406.2		83704	31560017	NM_031406.2	Slc12a9	NP_113583.1	ILMN_2737479	004220112	S	2839	CTGATGCCTGTTCATACAGGGTTGGATAGAGCGGGCCCAGGCTCATTCTG	5	-	137764366-137764374:137764275-137764315	5qG2	Mus musculus solute carrier family 12 (potassium/chloride transporters), member 9 (Slc12a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		CIP1	CIP1
Mus musculus	RefSeq	ILMN_215442	ILMN_215442	SLC12A9	NM_031406.2	NM_031406.2		83704	31560017	NM_031406.2	Slc12a9	NP_113583.1	ILMN_2659574	000060180	S	993	CTCTGGGCACCATCATTGCAGTCGCCTATACCTTCTTCATCTACATCCTG	5	-	137772218-137772267	5qG2	Mus musculus solute carrier family 12 (potassium/chloride transporters), member 9 (Slc12a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		CIP1	CIP1
Mus musculus	RefSeq	ILMN_215442	ILMN_215442	SLC12A9	NM_031406.2	NM_031406.2		83704	31560017	NM_031406.2	Slc12a9	NP_113583.1	ILMN_2998026	006480575	S	3069	TGCCTTGACCAGAGGGGCTGGCCTCTTCTGTGACTCTAGGCTACCTCAGT	5	-	137764091-137764136:137764182-137764185	5qG2	Mus musculus solute carrier family 12 (potassium/chloride transporters), member 9 (Slc12a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		CIP1	CIP1
Mus musculus	Riken	ILMN_202006	ILMN_202006	2010301N04RIK	ri|2010301N04|ZX00044I06|AK008513|1865					AK008513	2010301N04Rik		ILMN_2546307	005890687	S	274	GGGGCAGACTGTGATAGGCCGCGGGCCGCTGCTGGGAATAACAGACAAAA										
Mus musculus	Riken	ILMN_204356	ILMN_204356	C330049P11RIK	ri|C330049P11|PX00078A15|AK049380|1872					AK049380	C330049P11Rik		ILMN_1258337	002970458	S	1699	CCACATTGAGAATGGTGGTTAGGAGCTACCTTTGGGACCCAGACTCTCTG										
Mus musculus	MEEBO	ILMN_222962	ILMN_222962	LY9	scl15933.11.1_5	NM_008534.1			6678755	NM_008534.1	Ly9		ILMN_1213596	007050193	S	1134	GGATGCCTCTACAAAACAAAGCTGTCATGTCCCAAGGGAAGTCGCACCTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197018	ILMN_197018	LOC329277	XM_287057.1	XM_287057.1			28483358	XM_287057.1	LOC329277		ILMN_1248642	001400543	S	134	AAAGGGCTGGGGTGTCTAAAGGGAGAGCAATCCCCGGTGCCTCGTGACAA										
Mus musculus	RefSeq	ILMN_212339	ILMN_212339	SYPL2	NM_008596.1	NM_008596.1		17306	6678873	NM_008596.1	Sypl2	NP_032622.1	ILMN_2625299	001710468	S	3157	GGATGTGGGGAGAATGTTGCATGTTGTTCTGTGGTGCTTGTTACTACACA	3	-	108015224-108015273	3qF2.3-qF3	Mus musculus synaptophysin-like 2 (Sypl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Mg29; AI552439	Mg29; AI552439
Mus musculus	MEEBO	ILMN_217345	ILMN_217345	HK3	scl0003681.1_26	XM_127381.3			38074696	XM_127381.3	Hk3		ILMN_2682140	006960112	S	359	ACATGTGTAGACTTTCGACTTGTTTCTGGTGACAGTGGAATGGAGACATG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199982	ILMN_322602	BC050254	XR_035237.1	XR_035237.1		269630	149253565	XR_035237.1	BC050254		ILMN_2537173	001510360	S	143	CGTCGGCGGATGGATGAATGCACCTGTTGTGGGAAAGACGGAGTGTCTGG				5qA3	PREDICTED: Mus musculus cDNA sequence BC050254 (BC050254), misc RNA.					
Mus musculus	MEEBO	ILMN_188077	ILMN_188077	5830427D02RIK	scl46678.1.1_158						5830427D02Rik		ILMN_2449620	000380315	S	19	GCAGTTGGTGCTGTTATAGTTAGGAGTCCTCTGCTGTGAGTCTTGGATGT										
Mus musculus	RefSeq	ILMN_220310	ILMN_220310	PLA2G6	NM_016915.3	NM_016915.3		53357	118131199	NM_016915.3	Pla2g6	NP_058611.1	ILMN_2720429	005080112	S	2314	CGAGGTCTACATCTATGAGCACCGAGAGGAGTTCCAGAAGCTTGTCCAGC	15	-	79117197-79117246	15qE1	Mus musculus phospholipase A2, group VI (Pla2g6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]	BB112799; iPLA2	BB112799; iPLA2
Mus musculus	RefSeq	ILMN_188240	ILMN_241177	MEGF9	NM_172694.2	NM_172694.2		230316	141803271	NM_172694.2	Megf9	NP_766282.1	ILMN_2723891	004250609	S	2907	CGAAACTGGAACACAGGCTGCATTCTCCAGACACACCTAATTAGCCACTC	4	-	70093066-70093115	4qC2	Mus musculus multiple EGF-like-domains 9 (Megf9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mKIAA0818; 4933405H16Rik; 9630025C07; Egfl5	mKIAA0818; 4933405H16Rik; 9630025C07; Egfl5
Mus musculus	Riken	ILMN_202034	ILMN_202034	SOX7	ri|2310039K21|ZX00052D19|AK009704|771					AK009704	Sox7		ILMN_1234505	005260491	S	577	AGGACTCAGAGGGGCAGATACGTTTAGTCTGGGTGGAATCGGCGGAACCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214542	ILMN_214542	S100A1	NM_011309.3	NM_011309.3		20193	113930760	NM_011309.3	S100a1	NP_035439.1	ILMN_1225602	000940338	S	68	TGGCCACATTTGCAGCGTGCCCTTCTGTCGAGAATCTGTTCCGACGTCAG	3	-	90318135-90318184	3qF1	Mus musculus S100 calcium binding protein A1 (S100a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	S100; AI266795; S100a	S100; AI266795; S100a
Mus musculus	RefSeq	ILMN_218834	ILMN_313167	OTTMUSG00000016933	NM_001085525.1	NM_001085525.1		434727	148224565	NM_001085525.1	OTTMUSG00000016933	NP_001078994.1	ILMN_1215974	000020292	S	773	ACTCATTTTCGGTTTCTGATGGACTGTTGCTTTAAATAAATTTTGTGTGT				XqA1.1	Mus musculus predicted gene, OTTMUSG00000016933 (OTTMUSG00000016933), mRNA.		The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215584	ILMN_215584	CSPRS	NM_033616.3	NM_033616.3		114564	141803102	NM_033616.3	Csprs	NP_291094.2	ILMN_2661289	006520392	S	2485	CCCCTCACAGTCTGTTGAGTCCTATCTATACTCCCTCCAAACATCACGTG	8|NT_162750.1	-	111756-111805		Mus musculus component of Sp100-rs (Csprs), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC29132; D1Lub1; HSR	MGC29132; D1Lub1; HSR
Mus musculus	RefSeq	ILMN_215055	ILMN_255543	DSP	XM_621314.3	XM_621314.3		109620	94394767	XM_621314.3	Dsp	XP_621314.2	ILMN_2654997	004900689	S	8883	CTACGGGCAATTCTTCTTACTCCTATTCCTATTCATTTAGCAGTAGCTCC	13	+	38289737-38289786	13qA3.3	PREDICTED: Mus musculus desmoplakin, transcript variant 1 (Dsp), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]				
Mus musculus	RefSeq	ILMN_221835	ILMN_255543	DSP	XM_621314.3	XM_621314.3		109620	94394767	XM_621314.3	Dsp	XP_621314.2	ILMN_2741031	002750692	S	5581	CGAGCTAAGGAGCCAACTGCAGATCAGCAACAATCGAACCCTCGAGCTGC	13	+	38285395-38285444	13qA3.3	PREDICTED: Mus musculus desmoplakin, transcript variant 1 (Dsp), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]				
Mus musculus	RefSeq	ILMN_196679	ILMN_255543	DSP	XM_621314.3	XM_621314.3		109620	94394767	XM_621314.3	Dsp	XP_621314.2	ILMN_1224045	000060543	S	5445	GGCTACAGTCGCTCACGGAGAACCTGACCAAGGAACACTTGATGCTGGAG	13	+	38285259-38285308	13qA3.3	PREDICTED: Mus musculus desmoplakin, transcript variant 1 (Dsp), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]				
Mus musculus	RefSeq	ILMN_198519	ILMN_198519	LOC232862	XM_145354.2	XM_145354.2			38085956	XM_145354.2	LOC232862		ILMN_1245244	000730220	S	1123	GAAGAATCAGACGTGGATACCACTTCATCACCCTCGTCTCCTGGAGAGAC										
Mus musculus	MEEBO	ILMN_188861	ILMN_188861	TCRB-J	scl021580.1_139						Tcrb-J		ILMN_2456391	002970041	S	20	AATAAGCAACTCATTGTAAACGAAACAGTTCCAAGGCGCTTCTCACCTCA										
Mus musculus	RefSeq	ILMN_212721	ILMN_212721	ADSS	NM_007422.2	NM_007422.2		11566	31560736	NM_007422.2	Adss	NP_031448.2	ILMN_2957614	002750091	S	606	AGGGGATTGGCCCTGTGTATTCCTCTAAAGCTGCTCGGAGTGGACTTCGG	1	-	179613172-179613221	1qH4	Mus musculus adenylosuccinate synthetase, non muscle (Adss), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate [goid 6167] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [evidence IDA]	AS; AI314886; Adss2	AS; AI314886; Adss2
Mus musculus	RefSeq	ILMN_207491	ILMN_207491	8430415E04RIK	XM_138232.1	XM_138232.1			20858666	XM_138232.1	8430415E04Rik		ILMN_2587841	002230292	I	1386	ACCAAATTCTTCACTTTTTCAAGCTACAAGAATTTCAGTTCCTATTAGCT										
Mus musculus	RefSeq	ILMN_221860	ILMN_221860	OLFR342	NM_146948.1	NM_146948.1		258950	22129022	NM_146948.1	Olfr342	NP_667159.1	ILMN_2741317	000770044	S	637	TGCATTCTGGTCTCTTATGTCCGTATAGGTGTCACAATTCTGAGAACTCC	2	+	36383570-36383619	2qB	Mus musculus olfactory receptor 342 (Olfr342), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR136-4	MOR136-4
Mus musculus	MEEBO	ILMN_190720	ILMN_190720	TMEFF1	scl25447.12_116	NM_021436.1			39930404	NM_021436.1	Tmeff1		ILMN_2472693	003170341	S	16	AATAATCCTAATCATTTTAAAAGGGGCCTGGGAATTAACGGTGGAACAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]			
Mus musculus	MEEBO	ILMN_187878	ILMN_187878	VAMP1	scl0001087.1_51	NM_009496.2			31543936	NM_009496.2	Vamp1		ILMN_2480542	000160086	S	4	GAGAGGAAGGTGGTGTCCTATGTTGGCTCTAGGCCAGAAGGGCTGATGTG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]			
Mus musculus	MEEBO	ILMN_208731	ILMN_208731	4933434L15RIK	scl21492.13_316	NM_026231.1			29789170	NM_026231.1	4933434L15Rik		ILMN_1228033	001240301	S	1804	GAAGTGTGCAGACTCTGAAAAGCTCATTTGGACAGTGCTGGCTGCCTATG										
Mus musculus	RefSeq	ILMN_201999	ILMN_255298	CYB561D1	NM_001081320.2	NM_001081320.2		72023	139949164	NM_001081320.2	Cyb561d1	NP_001074789.2	ILMN_1225616	005290440	S	1369	ACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGG	3	-	108001461-108001510	3qF2.3	Mus musculus cytochrome b-561 domain containing 1 (Cyb561d1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AW457162; 1600010M23Rik; AI605489	AW457162; 1600010M23Rik; AI605489
Mus musculus	RefSeq	ILMN_213253	ILMN_213253	THBS2	NM_011581.1	NM_011581.1		21826	6755778	NM_011581.1	Thbs2	NP_035711.1	ILMN_2635229	006180168	S	3966	TATGAGGCTCACCGTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTT	17	-	14804241-14804290	17qA2	Mus musculus thrombospondin 2 (Thbs2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Thbs-2; TSP2	Thbs-2; TSP2
Mus musculus	RefSeq	ILMN_209611	ILMN_241124	1700001P01RIK	NM_028156.2	NM_028156.2		72215	118130873	NM_028156.2	1700001P01Rik	NP_082432.2	ILMN_2597451	007160037	S	545	GGCTTGACCTGCGTCTTCAAGACAGATGTTTAGATGAACTGTCAACGATA	11	-	97632824-97632873	11qD	Mus musculus RIKEN cDNA 1700001P01 gene (1700001P01Rik), mRNA.				RP23-386E10.4	RP23-386E10.4
Mus musculus	RefSeq	ILMN_198788	ILMN_229380	LOC669005	XM_978330.2	XM_978330.2		669005	149257019	XM_978330.2	LOC669005	XP_983424.1	ILMN_1218682	004390427	S	2441	TAGGAAACTGCCTTAAGCATTGGGGTGAGGTGGGGCTGGGGACCCTTGCG	7	+	19963529-19963578		PREDICTED: Mus musculus similar to NFkB interacting protein 1 (LOC669005), mRNA.					
Mus musculus	RefSeq	ILMN_218573	ILMN_240845	ADAMTS13	NM_001001322.2	NM_001001322.2		279028	114205379	NM_001001322.2	Adamts13	NP_001001322.1	ILMN_1240226	005080470	S	3559	TCACAAGGAAGCTACTCTTCCCAGTCAGACCCAGGCTGCTGCTACTGTTG	2	+	26860856-26860905	2qA3	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13 (Adamts13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Gm710; vWF-CP	Gm710; vWF-CP
Mus musculus	RefSeq	ILMN_240845	ILMN_240845	ADAMTS13	NM_001001322.2	NM_001001322.2		279028	114205379	NM_001001322.2	Adamts13	NP_001001322.1	ILMN_3038544	005860373	I	4477	CCTCTTTTAGTGACCTTTTCCAGGTGCAGAAGGGCTGGGACTGGGAGGTG	2	+	26865042-26865091	2qA3	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13 (Adamts13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Gm710; vWF-CP	Gm710; vWF-CP
Mus musculus	RefSeq	ILMN_240845	ILMN_240845	ADAMTS13	NM_001001322.2	NM_001001322.2		279028	114205379	NM_001001322.2	Adamts13	NP_001001322.1	ILMN_3112856	001050753	A	3951	AGCATCGTGTGCTGCCAGGGGGTGGAGTGCTGCTACGGTACTGGAGTCAA	2	+	26862244-26862293	2qA3	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13 (Adamts13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Gm710; vWF-CP	Gm710; vWF-CP
Mus musculus	MEEBO	ILMN_210118	ILMN_210118	2810004N20RIK	scl19009.5.1_4	NM_025576.1			23956129	NM_025576.1	2810004N20Rik		ILMN_2602406	004760433	S	724	GAAGCGATCGCCAAAATCCGGTCACACATCTCCATCAGGCCCAGCCAGCT										
Mus musculus	RefSeq	3010033P07Rik	ILMN_310507	LOC546015	XR_034790.1	XR_034790.1		546015	149258268	XR_034790.1	LOC546015		ILMN_2588053	002470521	S	273	AATGCTCTCCTGCGGCGGCTTGTTCGCATTGGGGTGCTGGACGAGGGCAA	7	-	148364096-148364145	7qF5	PREDICTED: Mus musculus similar to ribosomal protein S9 (LOC546015), misc RNA.					
Mus musculus	RefSeq	ILMN_213995	ILMN_310507	LOC546015	XR_034790.1	XR_034790.1		546015	149258268	XR_034790.1	LOC546015		ILMN_1214918	004220639	S	629	GGATTAATTAATACTTGGCTGAACTGGAGGATTGTCTAGTTTTCCAGCTG	7	-	148363740-148363789	7qF5	PREDICTED: Mus musculus similar to ribosomal protein S9 (LOC546015), misc RNA.					
Mus musculus	RefSeq	ILMN_198128	ILMN_198128	LOC328779	XM_283407.1	XM_283407.1			28498759	XM_283407.1	LOC328779		ILMN_1235229	006560619	S	529	TCCGCGCCTCGTCGTGGCTGGGTGATGTTCCAACATGTGTCCTGACTGTA										
Mus musculus	RefSeq	ILMN_251128	ILMN_251128	ALS2CR4	NM_001033449.1	NM_001033449.1		381259	83716016	NM_001033449.1	Als2cr4	NP_001028621.1	ILMN_3060966	001300400	I	13	AGGAGGATGTTCCGGTGGGGAGTTTGAATACGAGTCTGGTCCCGCCGTGC	1	-	59176878-59176927	1qC1.3	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4 (Als2cr4), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm972; AI853305	Gm972; AI853305
Mus musculus	RefSeq	ILMN_197178	ILMN_251800	EG635919	XM_911133.3	XM_911133.3		635919	149249098	XM_911133.3	EG635919	XP_916226.3	ILMN_1228329	004490672	S	1111	CAGCTTCCAAGAACCCCGTCTGAAGAGTTGTACCATTCACTGACACAGAG				2qA1	PREDICTED: Mus musculus predicted gene, EG635919 (EG635919), mRNA.					
Mus musculus	Riken	ILMN_203616	ILMN_203616	NAGLU	ri|A930031D14|PX00067D04|AK044668|2970					AK044668	Naglu		ILMN_1213365	004480289	S	2702	GCCTGTGCATATAGGTCTGTGTACCATATTTGTGCCTGGTGCTCTCGGAG							The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-alpha-D-glucosaminides [goid 4561] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214597	ILMN_214597	GDPD2	NM_023608.2	NM_023608.2		71584	31980660	NM_023608.2	Gdpd2	NP_076097.1	ILMN_1257924	000510327	S	1758	GGGTGATCACCGACTGTGCCTCCATTCTGCTGCTTTTGAGTATCTTCCTC	X	+	97933124-97933172:97933456-97933456	XqC3	Mus musculus glycerophosphodiester phosphodiesterase domain containing 2 (Gdpd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	9130017L10Rik; Gde3; Obdpf	9130017L10Rik; Gde3; Obdpf
Mus musculus	RefSeq	ILMN_214597	ILMN_214597	GDPD2	NM_023608.2	NM_023608.2		71584	31980660	NM_023608.2	Gdpd2	NP_076097.1	ILMN_2865726	005670368	S	2223	GAAGAAGCAGGGTGTGTCAGGGTGGGATAGCTCAGAATGATGACTGAAGG	X	+	97933959-97934008	XqC3	Mus musculus glycerophosphodiester phosphodiesterase domain containing 2 (Gdpd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	9130017L10Rik; Gde3; Obdpf	9130017L10Rik; Gde3; Obdpf
Mus musculus	RefSeq	ILMN_197442	ILMN_197442	LOC381433	XM_358576.1	XM_358576.1			38075847	XM_358576.1	LOC381433		ILMN_1218942	001570603	S	626	GGCCAATTTGAAAGTCAAACGAGCCGGGCGGCGATGGCTCACATCTTTTG										
Mus musculus	RefSeq	ILMN_219185	ILMN_219185	MRGPRB3	NM_207537.1	NM_207537.1		404238	46430529	NM_207537.1	Mrgprb3	NP_997420.1	ILMN_1256529	007320075	S	665	CACTCAGAGTGCTACTCCTCCTGATCTTTGGTATTCCCTTTGGGATCTTC	7	-	55898457-55898506	7qB4	Mus musculus MAS-related GPR, member B3 (Mrgprb3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgB3	MrgB3
Mus musculus	RefSeq	ILMN_223316	ILMN_223316	D17H6S56E-3	NM_138582.1	NM_138582.1		27762	20147794	NM_138582.1	D17H6S56E-3	NP_613048.1	ILMN_2889044	007550753	S	4178	GCCAGTGCATATGGACGAGGCTAAATCAGTACGACTCCAAAAGCCCCGTC	17	+	35161326-35161375	17qB1	Mus musculus DNA segment, Chr 17, human D6S56E 3 (D17H6S56E-3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			NG37; C6orf27; G7c	NG37; C6orf27; G7c
Mus musculus	RefSeq	ILMN_194399	ILMN_259710	SLC26A7	NM_145947.1	NM_145947.1		208890	22122374	NM_145947.1	Slc26a7	NP_666059.1	ILMN_2673151	000730021	S	2129	AGGCCAGATCCTGGCATTTTGCACACATTTTGGTGTATATACAGTGTATC	4	-	14432515-14432564	4qA1	Mus musculus solute carrier family 26, member 7 (Slc26a7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IDA]; The regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion [goid 1696] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IMP]	Catalysis of the energy-independent passage of anions across a lipid bilayer down a concentration gradient [goid 5253] [evidence IMP]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IDA];  [goid 15380] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	MGC30955	MGC30955
Mus musculus	RefSeq	ILMN_194399	ILMN_259710	SLC26A7	NM_145947.1	NM_145947.1		208890	22122374	NM_145947.1	Slc26a7	NP_666059.1	ILMN_1224808	004900397	S	2115	CAGCTGCCCCAAAGAGGCCAGATCCTGGCATTTTGCACACATTTTGGTGT	4	-	14432529-14432578	4qA1	Mus musculus solute carrier family 26, member 7 (Slc26a7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IDA]; The regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion [goid 1696] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IMP]	Catalysis of the energy-independent passage of anions across a lipid bilayer down a concentration gradient [goid 5253] [evidence IMP]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IDA];  [goid 15380] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	MGC30955	MGC30955
Mus musculus	RefSeq	ILMN_184417	ILMN_256698	GNAI2	NM_008138.4	NM_008138.4		14678	142387600	NM_008138.4	Gnai2	NP_032164.2	ILMN_2418465	002320041	S	2001	CCATTAACCTAAATGTAGCTCCTTAGCGCTAATCTAGGAACCGCCGCTGC	9	-	107516595-107516644	9qF1	Mus musculus guanine nucleotide binding protein (G protein), alpha inhibiting 2 (Gnai2), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IPI]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to one of its physiological ligands; muscarinic acetylcholine receptors activate inhibitory G proteins and can be activated by the fungal alkaloid muscarine [goid 7213] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence ISA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IGI]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	Gnai-2; Gia; C76432; Galphai2	Gnai-2; Gia; C76432; Galphai2
Mus musculus	RefSeq	ILMN_197269	ILMN_248003	ITGA4	NM_010576.3	NM_010576.3		16401	114326553	NM_010576.3	Itga4	NP_034706.3	ILMN_1251003	004200681	S	8612	CTACCCTGCCTCCCCCACTTCCAAACAGGGACACAGACAACAGGGGTCTT	2	+	79172051-79172100	2qC3	Mus musculus integrin alpha 4 (Itga4), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence IMP]	CD49D	CD49D
Mus musculus	RefSeq	ILMN_191097	ILMN_248003	ITGA4	NM_010576.3	NM_010576.3		16401	114326553	NM_010576.3	Itga4	NP_034706.3	ILMN_2635342	004590364	S	3289	GAGAGACAGCTGGAGTTATGTCAACAGCAAAAGCAATGATGACTGAAGAC	2	+	79166728-79166772:79166773-79166777	2qC3	Mus musculus integrin alpha 4 (Itga4), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence IMP]	CD49D	CD49D
Mus musculus	RefSeq	ILMN_220723	ILMN_220723	CDX2	NM_007673.3	NM_007673.3		12591	145301600	NM_007673.3	Cdx2	NP_031699.2	ILMN_2725853	006040066	S	1939	CCCTCGTCTTTGGCTGAAGAAGACCGGAATTGTTTGCTGCTGTTCGAGTC				5qG3	Mus musculus caudal type homeo box 2 (Cdx2), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	Cdx-2	Cdx-2
Mus musculus	RefSeq	ILMN_224138	ILMN_233307	MFAP5	NM_015776.2	NM_015776.2		50530	118131047	NM_015776.2	Mfap5	NP_056591.1	ILMN_1225835	001740181	S	1108	CCTCTGTACTCACTTTCACCATGCTTCGTGGCTTGTCCTAAATTTTGCCC	6	+	122479003-122479052	6qF1	Mus musculus microfibrillar associated protein 5 (Mfap5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins [goid 1527] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	A component of the extracellular matrix that enables the matrix to recoil after transient stretching [goid 30023] [evidence TAS]	MAGP-2	MAGP-2
Mus musculus	Riken	ILMN_207362	ILMN_207362	PTPRN2	ri|C030038G05|PX00665L08|AK081267|2875					AK081267	Ptprn2		ILMN_1226327	006550095	S	2644	GGGATCCAGGAAGCAAAGCACCATCCGAGACTGAAAGAAGCATGGTGGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215008	ILMN_215008	ARL3	NM_019718.2	NM_019718.2		56350	40254549	NM_019718.2	Arl3	NP_062692.1	ILMN_2786860	002450463	S	383	GAAAAGCTGAGTTGTGTGCCCGTGCTCATCTTTGCTAACAAGCAGGACCT	19	-	46616953-46617002	19qC3	Mus musculus ADP-ribosylation factor-like 3 (Arl3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215008	ILMN_215008	ARL3	NM_019718.2	NM_019718.2		56350	40254549	NM_019718.2	Arl3	NP_062692.1	ILMN_1238801	002600204	S	207	GCGTGCAGTCACAAGGTTTTAAGCTGAATGTATGGGACATTGGCGGGCAG	19	-	46626113-46626162	19qC3	Mus musculus ADP-ribosylation factor-like 3 (Arl3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IDA]		
Mus musculus	RefSeq	ILMN_206699	ILMN_242464	SP3	NM_001018042.2	NM_001018042.2		20687	124001546	NM_001018042.2	Sp3	NP_001018052.1	ILMN_2582048	005130037	S	448	ATGAACAGAGCTGACGGAGAGCCTAGCGGCAAATGAGAGCCGGGAAGAGG	2	-	72818538-72818587	2qC3	Mus musculus trans-acting transcription factor 3 (Sp3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; The process by which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils [goid 30851] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IMP]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The process by which the anatomical structures of the eye are generated and organized during embryonic development. Morphogenesis pertains to the creation of form [goid 48596] [evidence IGI]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IGI]; A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process by which a myeloid precursor cell acquires specializes features of a megakaryocyte [goid 30219] [evidence IGI]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IGI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]	D130027J01Rik; MGC105187	D130027J01Rik; MGC105187
Mus musculus	RefSeq	ILMN_214632	ILMN_214632	GAB2	NM_010248.1	NM_010248.1		14389	6753931	NM_010248.1	Gab2	NP_034378.1	ILMN_2714539	002070553	S	170	GCTGGTTTATACTTCGGAGTGGCCGAATGAGTGGAGATCCAGATGTTCTG	7	+	104371996-104372045	7qE1	Mus musculus growth factor receptor bound protein 2-associated protein 2 (Gab2), mRNA.		The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130058I17Rik; p97; AI463667	D130058I17Rik; p97; AI463667
Mus musculus	RefSeq	ILMN_214632	ILMN_214632	GAB2	NM_010248.1	NM_010248.1		14389	6753931	NM_010248.1	Gab2	NP_034378.1	ILMN_2758440	000430196	S	106	TGTACCGGCTGGCTGAGGAAATCGCCTCCCGAGAAGAAGTTGAGGCGCTA	7	+	104230366-104230415	7qE1	Mus musculus growth factor receptor bound protein 2-associated protein 2 (Gab2), mRNA.		The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130058I17Rik; p97; AI463667	D130058I17Rik; p97; AI463667
Mus musculus	RefSeq	ILMN_214632	ILMN_214632	GAB2	NM_010248.1	NM_010248.1		14389	6753931	NM_010248.1	Gab2	NP_034378.1	ILMN_2833573	005870274	S	1640	ACACTGTCATCGATGAGCTGCCCTTCAAGTCACCTGTCACCAAGTCTTGG	7	+	104450909-104450958	7qE1	Mus musculus growth factor receptor bound protein 2-associated protein 2 (Gab2), mRNA.		The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130058I17Rik; p97; AI463667	D130058I17Rik; p97; AI463667
Mus musculus	RefSeq	ILMN_214632	ILMN_214632	GAB2	NM_010248.1	NM_010248.1		14389	6753931	NM_010248.1	Gab2	NP_034378.1	ILMN_2650119	001850669	S	1957	GATGAGAAGGTAGACTATGTCCAAGTGGATAAAGAGAAGACCCAGGCCCT	7	+	104453410-104453459	7qE1	Mus musculus growth factor receptor bound protein 2-associated protein 2 (Gab2), mRNA.		The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130058I17Rik; p97; AI463667	D130058I17Rik; p97; AI463667
Mus musculus	RefSeq	ILMN_197097	ILMN_231815	LOC668682	XM_001003056.1	XM_001003056.1		668682	94392505	XM_001003056.1	LOC668682	XP_001003056.1	ILMN_1251833	002340026	S	176	TGGCAGTGGAGACTAAACCTCCTCGATGGCCGCCACGGTGTCCCGGCACT	12	+	23700170-23700219		PREDICTED: Mus musculus similar to development- and differentiation-enhancing factor 2 (LOC668682), mRNA.					
Mus musculus	MEEBO	ILMN_224073	ILMN_224073	1810013B01RIK	scl36510.4_431				27753959	NM_029631	1810013B01Rik		ILMN_2774244	006370364	S	1313	CAAATCTCCCTTAGGGGCTGCATACCTCCCCAGGTAATCAAGCACGGATC										
Mus musculus	RefSeq	ILMN_213799	ILMN_213799	GABARAP	NM_019749.3	NM_019749.3		56486	40254379	NM_019749.3	Gabarap	NP_062723.1	ILMN_1251333	001990364	S	674	GCCTACAGTGATGAAAGCGTCTATGGTCTGTGAAGCTGCTGTACCTGAGG	11	+	69805202-69805214:69805177-69805213	11qB3	Mus musculus gamma-aminobutyric acid receptor associated protein (Gabarap), mRNA.	The smooth endoplasmic reticulum (ER) has with no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER [goid 5790] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]		
Mus musculus	Riken	ILMN_202548	ILMN_202548	2810047L02RIK	ri|2810047L02|ZX00083M23|AK012919|1791					AK012919	2810047L02Rik		ILMN_1247842	004540152	S	1581	ACCAGTAGTTCTCAACCTGTGGGTCCCAACTCCCTTGAGGGTCACATCAG										
Mus musculus	RefSeq	ILMN_219487	ILMN_219487	SH3KBP1	NM_021389.3	NM_021389.3		58194	31340610	NM_021389.3	Sh3kbp1	NP_067364.2	ILMN_2881019	001690376	S	2622	GCCTTCTTTCTACCACCCTCTTGATTGGAGCTTTTGTGATGCAGCTACCA	X	+	155317914-155317963	XqF4	Mus musculus SH3-domain kinase binding protein 1 (Sh3kbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ruk; AI447724; Seta; 1200007H22Rik; 5830464D22Rik; 1700125L08Rik	Ruk; AI447724; Seta; 1200007H22Rik; 5830464D22Rik; 1700125L08Rik
Mus musculus	RefSeq	ILMN_219487	ILMN_219487	SH3KBP1	NM_021389.3	NM_021389.3		58194	31340610	NM_021389.3	Sh3kbp1	NP_067364.2	ILMN_2755443	000520762	S	2710	CACTAGAGGTCGCTGTCTTCACAGCTTCTCTCACCCTAGCCAAAGGTCCT	X	+	155318002-155318051	XqF4	Mus musculus SH3-domain kinase binding protein 1 (Sh3kbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ruk; AI447724; Seta; 1200007H22Rik; 5830464D22Rik; 1700125L08Rik	Ruk; AI447724; Seta; 1200007H22Rik; 5830464D22Rik; 1700125L08Rik
Mus musculus	RefSeq	ILMN_220935	ILMN_220935	AADAC	NM_023383.1	NM_023383.1		67758	13184049	NM_023383.1	Aadac	NP_075872.1	ILMN_2728813	002340082	S	483	AGTTTGAAGATGTGTATCGTAGTTTACGATGGTTCTTACAAGAGGACGTC	3	+	59842296-59842345	3qD	Mus musculus arylacetamide deacetylase (esterase) (Aadac), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence TAS]	Aada; 5033417E09Rik; AI265437	Aada; 5033417E09Rik; AI265437
Mus musculus	Riken	ILMN_204380	ILMN_204380	9830108D13RIK	ri|9830108D13|PX00118I17|AK036437|1489					AK036437	9830108D13Rik		ILMN_1241083	002370240	S	1321	ACTTTACAGCATTTCCCAATACTGCCATATCCACACACTGTCCCACTCAC										
Mus musculus	RefSeq	ILMN_213236	ILMN_213236	PARS2	NM_172272.1	NM_172272.1		230577	26986578	NM_172272.1	Pars2	NP_758476.1	ILMN_2947286	002120315	S	1826	GAGCACACGCCTTGCATTTCATTCAATCCAGATAGTGGGGCTACCGGCCC	4	+	106152849-106152898	4qC7	Mus musculus prolyl-tRNA synthetase (mitochondrial)(putative) (Pars2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling glycine to glycyl-tRNA, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6426] [evidence IEA]; The process of coupling proline to prolyl-tRNA, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6433] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly) [goid 4820] [evidence IEA]; Catalysis of the reaction: ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro) [goid 4827] [evidence IEA]	BC027073; MGC47008	BC027073; MGC47008
Mus musculus	RefSeq	ILMN_184196	ILMN_244001	USP42	NM_029749.2	NM_029749.2		76800	116686115	NM_029749.2	Usp42	NP_084025.2	ILMN_2416641	002140114	S	4929	GTGACACTTATAATTCACTGGTCCTGCATCAGGAGACGGGAGTGGGGAGA	5	-	144471366-144471415	5qG2	Mus musculus ubiquitin specific peptidase 42 (Usp42), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	A630018G05Rik; 2410140K03Rik; 3110031A07Rik; D5Ertd591e	A630018G05Rik; 2410140K03Rik; 3110031A07Rik; D5Ertd591e
Mus musculus	RefSeq	ILMN_209306	ILMN_244001	USP42	NM_029749.2	NM_029749.2		76800	116686115	NM_029749.2	Usp42	NP_084025.2	ILMN_2652403	002060609	S	3478	GAAGGAACGGCCCCACTTCAACAGCCCCCGAGAGGCCCCTAGCCTTGCTG	5	-	144475735-144475784	5qG2	Mus musculus ubiquitin specific peptidase 42 (Usp42), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	A630018G05Rik; 2410140K03Rik; 3110031A07Rik; D5Ertd591e	A630018G05Rik; 2410140K03Rik; 3110031A07Rik; D5Ertd591e
Mus musculus	RefSeq	ILMN_209306	ILMN_244001	USP42	NM_029749.2	NM_029749.2		76800	116686115	NM_029749.2	Usp42	NP_084025.2	ILMN_2594533	003780088	S	1281	TGAATGACTCCATCGTGTCCACCAGTGATATCAGAGCAGTGCTTAACCAG	5	-	144480388-144480437	5qG2	Mus musculus ubiquitin specific peptidase 42 (Usp42), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	A630018G05Rik; 2410140K03Rik; 3110031A07Rik; D5Ertd591e	A630018G05Rik; 2410140K03Rik; 3110031A07Rik; D5Ertd591e
Mus musculus	MEEBO	ILMN_184793	ILMN_184793	ZFP26	scl36165.9_171				51764772	XM_134736	Zfp26		ILMN_1247129	006550136	S	1	CCTGCCCTTGGTAAGTCTGGGCTTTGTAACTGAGTGAAAACTGAATTTGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200139	ILMN_232126	LRCH3	NM_001081255.1	NM_001081255.1		70144	124486938	NM_001081255.1	Lrch3	NP_001074724.1	ILMN_2537726	002470470	S	1942	GCAACTGATCCTACAGATGCTATAACAAGACAGAGAGAAGAAGAGCTGAA	16	+	32997503-32997552	16qB3	Mus musculus leucine-rich repeats and calponin homology (CH) domain containing 3 (Lrch3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW215594; Gm1742; 2210409B11Rik	AW215594; Gm1742; 2210409B11Rik
Mus musculus	RefSeq	ILMN_191399	ILMN_232126	LRCH3	NM_001081255.1	NM_001081255.1		70144	124486938	NM_001081255.1	Lrch3	NP_001074724.1	ILMN_2478746	001070753	S	964	GCCCTGGATTCAGGCTTCAATAGTGTGGATAGTGGTGATAAGAGATGGTC	16	+	32974000-32974049	16qB3	Mus musculus leucine-rich repeats and calponin homology (CH) domain containing 3 (Lrch3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW215594; Gm1742; 2210409B11Rik	AW215594; Gm1742; 2210409B11Rik
Mus musculus	RefSeq	ILMN_196566	ILMN_196566	ATPAF2	NM_145427.1	NM_145427.1		246782	21703851	NM_145427.1	Atpaf2	NP_663402.1	ILMN_2959285	003390487	S	1560	AAAAGTGAATCTTTGGAGGGCTGGAGAGATGGCTCAGCGGTTACGAGAGC	11	-	60214285-60214334	11qB2	Mus musculus ATP synthase mitochondrial F1 complex assembly factor 2 (Atpaf2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ATP12p; ATP12	ATP12p; ATP12
Mus musculus	RefSeq	ILMN_196566	ILMN_196566	ATPAF2	NM_145427.1	NM_145427.1		246782	21703851	NM_145427.1	Atpaf2	NP_663402.1	ILMN_2601118	006960044	S	1072	TCTGGATCCTGTGATACTCTGTTGGCCGGTACCTACTGGGCTCCCTCAGC	11	-	60214773-60214822	11qB2	Mus musculus ATP synthase mitochondrial F1 complex assembly factor 2 (Atpaf2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ATP12p; ATP12	ATP12p; ATP12
Mus musculus	RefSeq	ILMN_190420	ILMN_326683	6430590A10RIK	XR_035434.1	XR_035434.1		319850	149261170	XR_035434.1	6430590A10Rik		ILMN_1228540	000160072	S	2509	CTTTATGGTTATAGCCATACACTTACCCAGTATTAGCACGTGCATGTTAA	10	+	102832783-102832832	10qD1	PREDICTED: Mus musculus RIKEN cDNA 6430590A10 gene (6430590A10Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_213487	ILMN_213487	MPL	NM_010823.1	NM_010823.1		17480	6754729	NM_010823.1	Mpl	NP_034953.1	ILMN_1226499	000730273	S	2276	GCTGTTAAGGGAACTGTGCAAGCCTTCTAATTATGAGACCCAGTGGGGTC	4	-	118115586-118115635	4qD2.1	Mus musculus myeloproliferative leukemia virus oncogene (Mpl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	c-mpl; c-mpl-II; TPO-R; c-mpl-I; CD110	c-mpl; c-mpl-II; TPO-R; c-mpl-I; CD110
Mus musculus	RefSeq	ILMN_213487	ILMN_213487	MPL	NM_010823.1	NM_010823.1		17480	6754729	NM_010823.1	Mpl	NP_034953.1	ILMN_2855310	003460392	S	2760	GTTTCTTGCTCCTGGATAGTGAGTTGAAAGGCAAGGGTTAGGATCTGTCC	4	-	118115102-118115151	4qD2.1	Mus musculus myeloproliferative leukemia virus oncogene (Mpl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	c-mpl; c-mpl-II; TPO-R; c-mpl-I; CD110	c-mpl; c-mpl-II; TPO-R; c-mpl-I; CD110
Mus musculus	RefSeq	ILMN_219196	ILMN_219196	4930548H24RIK	NM_026296.3	NM_026296.3		67656	146135069	NM_026296.3	4930548H24Rik	NP_080572.1	ILMN_2705533	005420678	S	1254	GCGGCTGAAAGAGGAACAGTGCTATCAAGAAGCCTTAGTTAGGGGGAGAG				5qB1	Mus musculus RIKEN cDNA 4930548H24 gene (4930548H24Rik), mRNA.				AI427865	AI427865
Mus musculus	MEEBO	ILMN_210553	ILMN_210553	PRKCQ	scl0003268.1_201	NM_178075.2			31342580	NM_178075.2	Prkcq		ILMN_2606766	000150671	S	3607	TAGCTTTTCCCACACTCTCATGAGTTCCTTCAAATAAATATCAATTTAAT						An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197391	ILMN_197391	LOC218695	XM_127584.2	XM_127584.2			38075546	XM_127584.2	LOC218695		ILMN_2527972	000010095	S	691	GGCTATTTTCCGGGAGATTCCATGGCAACGTTTGAGAAGTGTGCTGCAGA										
Mus musculus	RefSeq	ILMN_221405	ILMN_229659	FSIP2	XM_913669.3	XM_913669.3		241516	149249473	XM_913669.3	Fsip2	XP_918762.3	ILMN_2735121	001580070	S	3979	GATGTTGTTAGGACGGTATTTCATAAGCTTTATTCAGCTGCCATGACTGA				2qD	PREDICTED: Mus musculus fibrous sheath-interacting protein 2 (Fsip2), mRNA.	A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IC ]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_210181	ILMN_210181	BC006662	scl45125.3_164				21703923	NM_145466	BC006662		ILMN_2769844	000650451	S	861	GACTAGGCTGCAGTTGCATCTCAGAAGTCGAATCTAGAAAGAAATGGCAG										
Mus musculus	RefSeq	ILMN_209860	ILMN_209860	SRP68	NM_146032.3	NM_146032.3		217337	47271534	NM_146032.3	Srp68	NP_666144.3	ILMN_2599897	004120681	S	2252	GTCAATATGTCAAAATTCGGGGTCCACGCCAGGCTTGGGGGGCTTGGGAG	11	-	116106704-116106753	11qE2	Mus musculus signal recognition particle 68 (Srp68), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	RP23-174D24.5; MGC38208; 2610024I03Rik	RP23-174D24.5; MGC38208; 2610024I03Rik
Mus musculus	RefSeq	ILMN_210078	ILMN_210078	DEFB41	NM_183124.2	NM_183124.2		77673	141801861	NM_183124.2	Defb41	NP_898947.1	ILMN_1229247	007100167	S	180	CCGTCTGTGATATTGATGAGTATGATTATGGATACTGTATCAGATGGAGG					Mus musculus defensin beta 41 (Defb41), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]		9230102D03Rik; Defb16	9230102D03Rik; Defb16
Mus musculus	Riken	ILMN_204280	ILMN_204280	9630031D17RIK	ri|9630031D17|PX00115K16|AK036056|1674					AK036056	9630031D17Rik		ILMN_2563774	004780367	S	517	CAAAATCGATCTGGAAGATAGGAAGTACCAGGGCACCGCAGAGAACCACC										
Mus musculus	RefSeq	ILMN_234747	ILMN_234747	EG406223	NM_001003670.1	NM_001003670.1		406223	51092300	NM_001003670.1	EG406223	NP_001003670.1	ILMN_3161245	007650170	S	1546	TTCAGCACTGGCAGAAGCAGAGGCATTGGGGGTGGCCTTGGCTCCTCTAG	15	-	101454522-101454571	15qF2	Mus musculus predicted gene, EG406223 (EG406223), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			Kb14	Kb14
Mus musculus	Riken	ILMN_207267	ILMN_207267	G630009F03RIK	ri|G630009F03|PL00013C04|AK090167|2939					AK090167	G630009F03Rik		ILMN_1215663	003710148	S	2607	GGGCTGCTCCCAACCCAGTTGTATGGATCTGACTGATACCCTCTTCAGGC										
Mus musculus	RefSeq	ILMN_259827	ILMN_259827	1500011H22RIK	NM_026883.1	NM_026883.1		68948	21312148	NM_026883.1	1500011H22Rik	NP_081159.1	ILMN_2973024	007050609	S	1169	CCACACCAAGCTCAGCCATCAGCTAACATCCACATGCTGAGTGCACAGGG	5	-	122625357-122625406	5qF	Mus musculus RIKEN cDNA 1500011H22 gene (1500011H22Rik), mRNA.					
Mus musculus	MEEBO	ILMN_196048	ILMN_196048	1500041J02RIK	scl0098730.1_284				27754062	NM_026424	1500041J02Rik		ILMN_2639498	006220615	S	74	GGGTGCCCGCGTTGGCTACCGGCTTCACAAAGATGATCAAGGCAGCTCGG										
Mus musculus	MEEBO	ILMN_196048	ILMN_196048	1500041J02RIK	scl0098730.1_284				27754062	NM_026424	1500041J02Rik		ILMN_2521147	002650402	S	20	ATTACTGATTAAATGTTGCTTTGCTGCTTATGGTCCGAGGCTCATGCTCA										
Mus musculus	MEEBO	ILMN_189120	ILMN_189120	AI314831	scl18910.4_3						AI314831		ILMN_2458534	000130021	S	3	CCCTGGAGGGTTTGGCCTATCCAAGCCACATATGGACCTGAATTCTAAAT										
Mus musculus	RefSeq	ILMN_187838	ILMN_187838	UQCR	NM_025650.2	NM_025650.2		66594	114051413	NM_025650.2	Uqcr	NP_079926.1	ILMN_2871881	000770086	S	305	GCGTAGTCCTGTGGAAGACACTGAGGAAGCTGGACACTGGAGAGGTCTGC	10	-	79865823-79865872	10qC1	Mus musculus ubiquinol-cytochrome c reductase (6.4kD) subunit (Uqcr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]	AL022707; 0710008D09Rik	AL022707; 0710008D09Rik
Mus musculus	RefSeq	ILMN_197673	ILMN_313993	LOC100048055	XM_001479430.1	XM_001479430.1		100048055	149251879	XM_001479430.1	LOC100048055	XP_001479480.1	ILMN_1227457	005810731	S	765	GACCCGTGTCTGTATTCTGTGGAAAATGAGAAGTCAGAGCACCAGGACCG					PREDICTED: Mus musculus similar to proline/serine-rich coiled-coil 2 (LOC100048055), mRNA.					
Mus musculus	Riken	ILMN_202909	ILMN_202909	4732418C03RIK	ri|4732418C03|PX00050H19|AK028617|2368					AK028617	4732418C03Rik		ILMN_1224501	003190189	S	2080	TGTTGTTCCACAGACATTCCCTCATTTAGAGGGGTGTGGTCCTGAAGGGC										
Mus musculus	Riken	ILMN_205206	ILMN_205206	D030022G05RIK	ri|D030022G05|PX00179O06|AK050820|3109					AK050820	D030022G05Rik		ILMN_1244049	002650379	S	2755	TGGATTCACCCCTCAATCCGGAGACAGGCAAGGCCATCCACACCATCTGG										
Mus musculus	RefSeq	ILMN_211478	ILMN_211478	OLFR68	NM_013620.2	NM_013620.2		18369	134947982	NM_013620.2	Olfr68	NP_038648.2	ILMN_2616290	000290717	S	439	GGAGCTGGTGCATTACTCAGGGCTTTCATTCTTGTATCCCCATCCATACT	7	-	110926369-110926418	7qE3	Mus musculus olfactory receptor 68 (Olfr68), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR22-3; 3'beta2; 3'[b]2	MOR22-3; 3'beta2; 3'[b]2
Mus musculus	Riken	ILMN_202340	ILMN_202340	PDE3A	ri|1200007J10|R000008N07|AK004638|1821					AK004638	Pde3a		ILMN_2548846	001690193	S	1644	GGGTTCCAAATACCCCCATTAGGTGGCTTACAACCACCTGTAGCCCTAGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that modulates the frequency, rate or extent of meiosis, the process by which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes [goid 40020] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211814	ILMN_211814	GCG	NM_008100.3	NM_008100.3		14526	118130931	NM_008100.3	Gcg	NP_032126.1	ILMN_1247347	003140524	S	653	CATTCACAACCATCTTCACAACATCTCGTGCCAGTCACTTGGGATGTACA	2	-	62312975-62313024	2qC1.3	Mus musculus glucagon (Gcg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	GLP-1	GLP-1
Mus musculus	MEEBO	ILMN_189777	ILMN_189777	5031436O03RIK	scl12928.1.1_277						5031436O03Rik		ILMN_1219017	003460110	S	2	GGTCCTGCCATCCGGGAGGAAAAGGAAAGTTTAGCCTCTAGTCTACCACC										
Mus musculus	RefSeq	ILMN_222516	ILMN_222516	SERPINA3N	NM_009252.2	NM_009252.2		20716	130503300	NM_009252.2	Serpina3n	NP_033278.2	ILMN_1246800	002450347	S	1955	CCCCTGGCACTCCTACTTAGAACAAAGTAGCCTTTCTTTTAGTTCCCAGC	12	+	105652409-105652458	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 3N (Serpina3n), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Spi2/eb.4; Spi2-2; Spi2.2	Spi2/eb.4; Spi2-2; Spi2.2
Mus musculus	Riken	ILMN_202447	ILMN_202447	4930435O15RIK	ri|4930435O15|PX00031I07|AK015329|2480					AK015329	4930435O15Rik		ILMN_1220681	002060092	S	2180	TTACACAGGGAGAAGTGGTATAGAGCCCTGCCTGACACCTCCCTCGAGCC										
Mus musculus	RefSeq	ILMN_200165	ILMN_200165	LOC385844	XM_358968.1	XM_358968.1			38080748	XM_358968.1	LOC385844		ILMN_2537810	005700730	S	3	GGCCAGCCCCGAAGCTTTTGGTAGATGGTCAGTGACTCTTGGTATTCTTA										
Mus musculus	Riken	ILMN_207004	ILMN_207004	6530440K01RIK	ri|6530440K01|PX00649E18|AK078389|1155					AK078389	6530440K01Rik		ILMN_1232252	006980286	S	950	CCCACAAATCTCTCACACGGACCCAAGCAGAACATCAGCGGGAAGTGGGG										
Mus musculus	Riken	ILMN_202738	ILMN_202738	2210039O17RIK	ri|2210039O17|ZX00079D03|AK019056|357					AK019056	2210039O17Rik		ILMN_2551902	005670079	S	259	CCCCACTTGTGGAACATTCCATTGGGGCTTTGTGCCATGCAGCAGTGACT										
Mus musculus	RefSeq	ILMN_187462	ILMN_187462	UNCX	NM_013702.3	NM_013702.3		22255	145386527	NM_013702.3	Uncx	NP_038730.1	ILMN_1233941	000360452	S	1740	CAGCCCCAGACTCCCAACGAATCAGGTGATCGGCTCTTAGAGACATTGCT				5qG2	Mus musculus UNC homeobox (Uncx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input [goid 21516] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input [goid 21516] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Chx4	Chx4
Mus musculus	RefSeq	ILMN_209469	ILMN_209469	LRFN4	NM_153388.3	NM_153388.3		225875	141802447	NM_153388.3	Lrfn4	NP_700437.2	ILMN_1213309	001740328	S	2757	ACCTAGGAGACACCGGAGGATGCTACGGGTATGCCAGGCGCCTGGGAGGA	19	-	4612179-4612228	19qA	Mus musculus leucine rich repeat and fibronectin type III domain containing 4 (Lrfn4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SALM3; MGC36545; MGC36464; BC023156	SALM3; MGC36545; MGC36464; BC023156
Mus musculus	RefSeq	ILMN_212726	ILMN_212726	PLAU	NM_008873.2	NM_008873.2		18792	31560816	NM_008873.2	Plau	NP_032899.1	ILMN_2629582	006130561	S	1972	CTCCAGACTGTGATGCGGGGCCATTTGGTCTTCCATGTGATGCTCCACGT	14	+	21662284-21662333	14qA3	Mus musculus plasminogen activator, urokinase (Plau), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; The orderly movement of smooth muscle cells from one site to another, often during the development of a multicellular organism [goid 14909] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	uPA; u-PA	uPA; u-PA
Mus musculus	RefSeq	ILMN_217902	ILMN_217902	WDR40C	NM_175539.3	NM_175539.3		245403	130502093	NM_175539.3	Wdr40c	NP_780748.1	ILMN_1258269	003520670	S	2728	GCAATGGTCAGAGTGAGTGCAGTTGATACTTGTATTGGGTACATATATAG	X	-	41718737-41718786	XqA4	Mus musculus WD repeat domain 40C (Wdr40c), mRNA.				A130007F10Rik; RP23-260P9.3	A130007F10Rik; RP23-260P9.3
Mus musculus	RefSeq	ILMN_251415	ILMN_251415	2410127L17RIK	NM_026120.4	NM_026120.4		67383	126215550	NM_026120.4	2410127L17Rik	NP_080396.2	ILMN_3095257	000150315	A	509	CCTCTTCACTTGGACAAGATCCGGAAATGCATTGACCATAATCAGGAAAT	19	+	18752263-18752312	19qB	Mus musculus RIKEN cDNA 2410127L17 gene (2410127L17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_251415	ILMN_251415	2410127L17RIK	NM_026120.4	NM_026120.4		67383	126215550	NM_026120.4	2410127L17Rik	NP_080396.2	ILMN_3022895	004180201	I	130	CCGGCGCCGTCTAGAGGAGGCCCGGCCGTTCGCCACCACGCACTCGGGAG	19	+	18745399-18745448	19qB	Mus musculus RIKEN cDNA 2410127L17 gene (2410127L17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211283	ILMN_251415	2410127L17RIK	NM_026120.4	NM_026120.4		67383	126215550	NM_026120.4	2410127L17Rik	NP_080396.2	ILMN_1248804	006400327	S	1166	ATTGATACAATATGGAGAATACTCAAGCCAGGTGGAATCTGGATAAATCT	19	+	18768201-18768250	19qB	Mus musculus RIKEN cDNA 2410127L17 gene (2410127L17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216040	ILMN_216040	FANCA	NM_016925.2	NM_016925.2		14087	142366102	NM_016925.2	Fanca	NP_058621.1	ILMN_1220189	001230762	S	4430	GATTACCAATCTCCTTGATTGCTCTAGTTAGGAAAAGAAATATTAATTAT	8	-	125792205-125792254	8qE1	Mus musculus Fanconi anemia, complementation group A (Fanca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IMP]		AW208693; D8Ertd106e	AW208693; D8Ertd106e
Mus musculus	RefSeq	ILMN_198038	ILMN_198038	LOC208151	XM_144572.3	XM_144572.3			38080786	XM_144572.3	LOC208151		ILMN_2530264	002680711	S	2819	AGCAAGGCAACATCCCGCATTCTCACGACTGGGTGTGGCTCGGGAATGAG										
Mus musculus	RefSeq	ILMN_196067	ILMN_234675	GFAP	NM_010277.2	NM_010277.2		14580	84000447	NM_010277.2	Gfap	NP_034407.2	ILMN_1214715	001400603	S	1214	CCTCAAGAGGAACATCGTGGTAAAGACTGTGGAGATGCGGGATGGTGAGG	11	-	102750034-102750035:102750749-102750796	11qE1	Mus musculus glial fibrillary acidic protein (Gfap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; Any constituent part of a cell, the basic structural and functional unit of all organisms [goid 44464] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]	Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins [goid 45103] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI836096	AI836096
Mus musculus	RefSeq	ILMN_200523	ILMN_200523	LOC386422	XM_359221.1	XM_359221.1			38083151	XM_359221.1	LOC386422		ILMN_1231725	001740440	S	86	AGTTCAGGCCAATACAGCAGTCCACAGCGATCCACGACTACAGCCTGGGC										
Mus musculus	RefSeq	ILMN_184809	ILMN_257843	KIF1C	NM_153103.1	NM_153103.1		16562	23821039	NM_153103.1	Kif1c	NP_694743.1	ILMN_1226888	006650451	S	3125	GTTCTACACAGCCAGAACCCCAGCGCTTACGGCCCCAAAAGCACAACGGT	11	+	70530983-70531000:70532485-70532516	11qB3	Mus musculus kinesin family member 1C (Kif1c), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [evidence IDA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Ltxs1; B430105J22Rik; D11Bwg1349e	Ltxs1; B430105J22Rik; D11Bwg1349e
Mus musculus	RefSeq	ILMN_213349	ILMN_213349	SCUBE2	NM_020052.1	NM_020052.1		56788	9910153	NM_020052.1	Scube2	NP_064436.1	ILMN_1258399	005290253	S	2079	CCATGCCCAAGACCAGAAAATCTTGGGTCCCTAAAAATCTCAGAAGCCTG	7	-	116976639-116976688	7qF1	Mus musculus signal peptide, CUB domain, EGF-like 2 (Scube2), mRNA.	Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence ISO]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISO]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Cegf1; Cegp1; 4932442O19Rik	Cegf1; Cegp1; 4932442O19Rik
Mus musculus	RefSeq	ILMN_213349	ILMN_213349	SCUBE2	NM_020052.1	NM_020052.1		56788	9910153	NM_020052.1	Scube2	NP_064436.1	ILMN_2636183	006590041	S	2929	CTCTGTTTGATGTCCTGGCACATCCCCAGAACTATTTCAAGTACACAGCC	7	-	116970201-116970250	7qF1	Mus musculus signal peptide, CUB domain, EGF-like 2 (Scube2), mRNA.	Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence ISO]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISO]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Cegf1; Cegp1; 4932442O19Rik	Cegf1; Cegp1; 4932442O19Rik
Mus musculus	Riken	ILMN_202581	ILMN_202581	REQ	ri|6430400A21|PX00009J07|AK018271|2169					AK018271	Req		ILMN_2550693	003520181	S	1740	GGCTTGGGTGATAAGGGGTGCTTGGGGGATACACAAGTTCACTTCTTTCT										
Mus musculus	Riken	ILMN_207092	ILMN_207092	F830048D03RIK	ri|F830048D03|PL00007H11|AK089900|3726					AK089900	F830048D03Rik		ILMN_2584985	007570280	S	3593	GTGTGATTGCCAAATGTCACGGCGTATGCCTGTAACCTCAGCACTGAGGA										
Mus musculus	MEEBO	ILMN_189001	ILMN_189001	D12ERTD748E	scl42980.15_419				21450220	NM_144833	D12Ertd748e		ILMN_2457507	006900711	S	10	GGTCAAGAAGTTTATCCAGTCTTTCTCTTTTAAGATAGAATATTAAATAG										
Mus musculus	RefSeq	ILMN_189740	ILMN_189740	TRIP4	NM_019797.3	NM_019797.3		56404	71773828	NM_019797.3	Trip4	NP_062771.2	ILMN_2463951	003850603	S	2583	GGAGCAAAGAAGGGGTTAATGAAGCAGAATAAAGCTGTCTGACCCAGGAA	9	-	65681180-65681187:65681188-65681229	9qC	Mus musculus thyroid hormone receptor interactor 4 (Trip4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	ASC-1; BB191711; 4930558E03Rik	ASC-1; BB191711; 4930558E03Rik
Mus musculus	MEEBO	ILMN_222759	ILMN_222759	2900016G23RIK	scl44033.1.1176_137	XM_147738.1			20894732	XM_147738.1	2900016G23Rik		ILMN_1247541	003840494	S	1528	TCCCCGCACAGTGTGGATTGCTCCTTAGCTACTGCACAGATTGCAATATA										
Mus musculus	MEEBO	ILMN_224202	ILMN_224202	B3GNT3	scl34666.4_288				31982624	NM_028189	B3gnt3		ILMN_2776503	004050021	S	1622	GGCTGGCAGGAAATAAAGTCCATAGAAGGTTGAACGTGATTGTAGGGGGA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190340	ILMN_190340	BICD2	scl44795.7_219				24475694	NM_029791	Bicd2		ILMN_2469294	001090435	S	14	GGCCAAGTGAGGAGAAGGCATAGGAAGGTGAGACTAGCTGAGACTTCTGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200935	ILMN_200935	LOC384659	XM_357770.1	XM_357770.1			38087169	XM_357770.1	LOC384659		ILMN_1219325	003140546	S	1123	AGCTCGGAGATGGCTCCTTTCATTGCCCGATGCTTGGCTTCAGTTTGGTG										
Mus musculus	RefSeq	ILMN_197408	ILMN_314070	LOC100043609	XM_001480340.1	XM_001480340.1		100043609	149250054	XM_001480340.1	LOC100043609	XP_001480390.1	ILMN_1248493	004920376	S	421	CTGAACAACCTGGCCTAGAGAAAACCTTCCCACTGAGACAACTCTCCTGC	2	-	119147160-119147209	2qE5	PREDICTED: Mus musculus hypothetical protein LOC100043609 (LOC100043609), mRNA.					
Mus musculus	RefSeq	ILMN_209012	ILMN_209012	SLC36A1	NM_153139.4	NM_153139.4		215335	145207964	NM_153139.4	Slc36a1	NP_694779.3	ILMN_2591713	002480400	S	2788	GCCCCAAGCTGCCTCTGTATCCTGGGCTTCCAAGGAACCACTAAACACTA				11qB1.3	Mus musculus solute carrier family 36 (proton/amino acid symporter), member 1 (Slc36a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of L-alanine, the levorotatory isomer of 2-aminopropanoic acid, into, out of, within or between cells [goid 15808] [evidence IDA]; The directed movement of glycine, aminoethanoic acid, into, out of, within or between cells [goid 15816] [evidence IDA]; The directed movement of proline, pyrrolidine-2-carboxylic acid, into, out of, within or between cells [goid 15824] [evidence IDA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of glycine from one side of a membrane to the other. Glycine is aminoethanoic acid [goid 15187] [evidence IDA]; Catalysis of the transfer of L-proline from one side of a membrane to the other. L-proline is pyrrolidine-2-carboxylic acid [goid 15193] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + H+(out) = amino acid(in) + H+(in) [goid 5280] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of L-tyrosine from one side of a membrane to the other. L-tyrosine is 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 5302] [evidence IDA]; Catalysis of the transfer of L-alanine from one side of a membrane to the other. L-alanine, the levorotatory isomer of 2-aminopropanoic acid [goid 15180] [evidence IDA]	Pat1; 5830411H19Rik; AI839897	Pat1; 5830411H19Rik; AI839897
Mus musculus	RefSeq	ILMN_210220	ILMN_210220	DNASE2B	NM_019957.2	NM_019957.2		56629	31542565	NM_019957.2	Dnase2b	NP_064341.2	ILMN_2990014	006350470	S	2329	TGGTAGGGTCTAATGGCCCAATGACAGGCTGTGAAGAGTTGATTTCGTGT	3	-	146518679-146518728	3qH2	Mus musculus deoxyribonuclease II beta (Dnase2b), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks [goid 4520] [evidence IDA]; Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products [goid 4531] [evidence IEA]	DnaseIIb; Dlad; AI526873	DnaseIIb; Dlad; AI526873
Mus musculus	Riken	ILMN_206078	ILMN_206078	CASP12	ri|E130014I21|PX00208D23|AK053407|1504					AK053407	Casp12		ILMN_1255816	004010273	S	1277	GGACCATAGATGGTAGAGACAGGCAGAATACTGATGCTTTGCTAGCAGGC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; The process of apoptosis in cells infected with a virus [goid 6926] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199243	ILMN_199243	LOC333456	XM_285621.2	XM_285621.2			38093374	XM_285621.2	LOC333456		ILMN_2534549	001980132	S	659	CTTTGGGACTCACACAGACTCAGGTCAAGATCTGGTTCCAAAACAAGCGA										
Mus musculus	RefSeq	ILMN_200197	ILMN_310623	LOC100047611	XM_001478513.1	XM_001478513.1		100047611	149267873	XM_001478513.1	LOC100047611	XP_001478563.1	ILMN_1233333	007570601	S	629	GAAAGTGGCCTTGGGAGAACAGAAGCGGAGCCACAGGAATGGAACCTGAG					PREDICTED: Mus musculus similar to poliovirus receptor-related 4 (LOC100047611), mRNA.					
Mus musculus	RefSeq	ILMN_221609	ILMN_221609	FBXO27	NM_207238.2	NM_207238.2		233040	141802348	NM_207238.2	Fbxo27	NP_997121.1	ILMN_2737738	005860022	S	1769	CCCACAGATTTTCTCCAAACAATTGGGAAGTGCCTAGAGTCCAGGCCCCG	7	+	29484180-29484229	7qA3	Mus musculus F-box protein 27 (Fbxo27), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FBG5; Gm161; E130008B10Rik	FBG5; Gm161; E130008B10Rik
Mus musculus	MEEBO	ILMN_223160	ILMN_223160	OG9X	scl41200.3.1_36	NM_008759.1			10198599	NM_008759.1	Og9x		ILMN_2760088	005860204	S	334	TGCACCCTACCAGTTCAGCTCAGTATACTTCAGCATGCCCACCACAGACC										
Mus musculus	RefSeq	ILMN_190847	ILMN_234067	LOC676124	XM_987602.1	XM_987602.1		676124	94377662	XM_987602.1	LOC676124	XP_992696.1	ILMN_1255400	000540014	S	14	CCCATGTCCTCATGTTCTTGCTGCTTTGGGTATCTGATACCTGTGGGGAC					PREDICTED: Mus musculus similar to Ig kappa chain V-IV region precursor (LOC676124), mRNA.					
Mus musculus	RefSeq	ILMN_186586	ILMN_186586	UBE3C	NM_133907.3	NM_133907.3		100763	146149335	NM_133907.3	Ube3c	NP_598668.1	ILMN_2436772	002370131	S	4616	GTCCAGCATCTGTGCCTGGAGGCTCTTTGTGCTGTTGGAGTTAGGTGAAC				5qB1	Mus musculus ubiquitin protein ligase E3C (Ube3c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	AI853514; mKIAA0010	AI853514; mKIAA0010
Mus musculus	RefSeq	ILMN_221098	ILMN_221098	PCDHB4	NM_053129.3	NM_053129.3		93875	113866008	NM_053129.3	Pcdhb4	NP_444359.3	ILMN_2884819	003610113	S	3523	CTGCCTCCTGAGTATGGGGATTAAAGTCATGCACCACAGCACCCAGCAGC	18	+	37470631-37470680	18qB3	Mus musculus protocadherin beta 4 (Pcdhb4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcdhb5A; PcdhbD	Pcdhb5A; PcdhbD
Mus musculus	MEEBO	ILMN_224133	ILMN_224133	TDE2	scl37947.10_418				9790268	NM_019760	Tde2		ILMN_2775381	004880112	S	2724	CCAGCCTTACTCTGTGTTAATACTGCTTCACAATTCTGAATGGCTGTGTT										
Mus musculus	RefSeq	ILMN_217615	ILMN_217615	EDC4	NM_181594.2	NM_181594.2		234699	31795580	NM_181594.2	Edc4	NP_853625.1	ILMN_2685487	005050241	S	4368	TGCTGTTTCCCTGCTCAGGCCTTCCTCTCTGGTGTGTGGAGGGAGGTATG	8	+	108416831-108416880	8qD3	Mus musculus enhancer of mRNA decapping 4 (Edc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			BC022641	BC022641
Mus musculus	RefSeq	ILMN_214841	ILMN_214841	ACSS3	NM_198636.2	NM_198636.2		380660	141803141	NM_198636.2	Acss3	NP_941038.1	ILMN_1236250	002370307	S	2423	ATTCTATCAGGCATCATGAAAAATATTGGAATGATATATTTGGAAAAAAT	10	-	106402159-106402208	10qD1	Mus musculus acyl-CoA synthetase short-chain family member 3 (Acss3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IEA]	Gm874	Gm874
Mus musculus	RefSeq	ILMN_191789	ILMN_248189	DDX60	NM_001081215.1	NM_001081215.1		234311	124487048	NM_001081215.1	Ddx60	NP_001074684.1	ILMN_2482207	006370400	S	1652	CCAAATTTAGGTTTTATTCCAATGTCATGTAATTTAGTTGATGAATTTAC	8	+	64436862-64436911	8qB3.1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 (Ddx60), mRNA.				MGC19297; 9830118M07	MGC19297; 9830118M07
Mus musculus	RefSeq	ILMN_213291	ILMN_248189	DDX60	NM_001081215.1	NM_001081215.1		234311	124487048	NM_001081215.1	Ddx60	NP_001074684.1	ILMN_1228399	000150168	S	5198	CCACTTAATGCCTATGCACTTGATTTCTATAAGCATGGATCCCTTATTGG	8	+	64512256-64512305	8qB3.1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 (Ddx60), mRNA.				MGC19297; 9830118M07	MGC19297; 9830118M07
Mus musculus	RefSeq	ILMN_220643	ILMN_220643	BICD1	NM_009753.1	NM_009753.1		12121	33859515	NM_009753.1	Bicd1	NP_033883.1	ILMN_1218368	003610072	S	1114	GGAGCTGTCCCAGTACATCAACCTCAGTGATAGCCACATCAGCATCTCAG	6	+	149469033-149469082	6qG3	Mus musculus bicaudal D homolog 1 (Drosophila) (Bicd1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]			B830009D06Rik; mKIAA4125; KIAA4125	B830009D06Rik; mKIAA4125; KIAA4125
Mus musculus	RefSeq	ILMN_199770	ILMN_199770	LOC383913	XM_357320.1	XM_357320.1			38077077	XM_357320.1	LOC383913		ILMN_1237016	006060767	S	219	CTCGTTGAAGCTTGGAGTTGCTGTTGCTACTCTAGGTGAGGAGTGGAAGG										
Mus musculus	RefSeq	ILMN_196618	ILMN_196618	BC003321	XM_125153.1	XM_125153.1			20888128	XM_125153.1	BC003321		ILMN_1221475	005130044	S	970	TTCCTCCAGTGTTGGGATGGAGTGGCATGGGTCCAGGGGTAGGGTGGAAG										
Mus musculus	RefSeq	ILMN_223181	ILMN_238475	ZFP800	NM_001081678.1	NM_001081678.1		627049	126157487	NM_001081678.1	Zfp800	NP_001075147.1	ILMN_2760387	002900133	S	3313	ACCATGTTTTTATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCA	6	-	28190463-28190512	6qA3.2	Mus musculus zinc finger protein 800 (Zfp800), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219188	ILMN_219188	SLC39A5	NM_028051.2	NM_028051.2		72002	142382758	NM_028051.2	Slc39a5	NP_082327.1	ILMN_2705424	006940215	S	88	AGGGAGGCGGAACAAGCTTGAGAGGTGGGTTGTCTCGGGACCAGGTGTAA	10	-	127837385-127837434	10qD3	Mus musculus solute carrier family 39 (metal ion transporter), member 5 (Slc39a5), mRNA.	The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence TAS]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence TAS]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	2010205A06Rik; Zip5; 1810013D05Rik	2010205A06Rik; Zip5; 1810013D05Rik
Mus musculus	RefSeq	ILMN_218955	ILMN_243519	PPM1E	NM_177167.4	NM_177167.4		320472	118130345	NM_177167.4	Ppm1e	NP_796141.2	ILMN_2702374	001410673	S	6064	GCAGATACAGCACTGTAATCTCTCTAGGTGCTCTTTGGTGAGAGACGAGC	11	-	87040609-87040658	11qC	Mus musculus protein phosphatase 1E (PP2C domain containing) (Ppm1e), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]	B930008A12Rik; mKIAA1072; PP2CH; POPX1; AW049266	B930008A12Rik; mKIAA1072; PP2CH; POPX1; AW049266
Mus musculus	RefSeq	ILMN_243519	ILMN_243519	PPM1E	NM_177167.4	NM_177167.4		320472	118130345	NM_177167.4	Ppm1e	NP_796141.2	ILMN_2784068	003870678	S	5996	GGGGGTTCCACCCTGGCGCAGCAGTCATGCTTGAAAAGGAAGTCTTTAAC	11	-	87040677-87040726	11qC	Mus musculus protein phosphatase 1E (PP2C domain containing) (Ppm1e), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]	B930008A12Rik; mKIAA1072; PP2CH; POPX1; AW049266	B930008A12Rik; mKIAA1072; PP2CH; POPX1; AW049266
Mus musculus	RefSeq	ILMN_214999	ILMN_214999	OLFR1120	NM_147029.1	NM_147029.1		259031	22128890	NM_147029.1	Olfr1120	NP_667240.1	ILMN_2654348	003520707	S	737	CTTGTTCTTCACATCTGGTGGTAGTGCTTTTATTTTTTGGATCAGCTACC	2	+	87198339-87198388	2qD	Mus musculus olfactory receptor 1120 (Olfr1120), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR264-2	MOR264-2
Mus musculus	RefSeq	ILMN_213751	ILMN_213751	SPATA2	NM_170756.2	NM_170756.2		263876	110625966	NM_170756.2	Spata2	NP_739562.1	ILMN_2640415	007610059	S	2441	CCTCCTGTTTGCATAACCCCCTTACTGTATTGTACATACAGAATTTGAGG	2	-	167308141-167308190	2qH3	Mus musculus spermatogenesis associated 2 (Spata2), mRNA.				mKIAA0757; MGC38980; AI504642	mKIAA0757; MGC38980; AI504642
Mus musculus	RefSeq	ILMN_213751	ILMN_213751	SPATA2	NM_170756.2	NM_170756.2		263876	110625966	NM_170756.2	Spata2	NP_739562.1	ILMN_2692815	002690037	S	3645	TAAAATGCACATATTTTGCATTTGATTTCTACGGAGTTGAAATGTTGAGA	2	-	167306937-167306986	2qH3	Mus musculus spermatogenesis associated 2 (Spata2), mRNA.				mKIAA0757; MGC38980; AI504642	mKIAA0757; MGC38980; AI504642
Mus musculus	RefSeq	ILMN_214409	ILMN_214409	SLC25A14	NM_011398.1	NM_011398.1		20523	6755543	NM_011398.1	Slc25a14	NP_035528.1	ILMN_1216852	006290747	S	1288	TTTTTGCACTCTATAAAGGATTTTGGCCAAACTGGCTTCGACTTGGACCC	X	+	46013886-46013935	XqA4	Mus musculus solute carrier family 25 (mitochondrial carrier, brain), member 14 (Slc25a14), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	UCP5L; UCP5S; UCP5; BMCP1	UCP5L; UCP5S; UCP5; BMCP1
Mus musculus	RefSeq	ILMN_211766	ILMN_323057	4930519H02RIK	XM_001476319.1	XM_001476319.1		75058	149253569	XM_001476319.1	4930519H02Rik	XP_001476369.1	ILMN_2619340	005570148	S	257	GTTTGCTGGTGGAGAAGATTGCATGACACACATAAAAGTGGGCGAGGAAG				5qA2	PREDICTED: Mus musculus RIKEN cDNA 4930519H02 gene (4930519H02Rik), mRNA.					
Mus musculus	MEEBO	ILMN_195686	ILMN_195686	F730043M19RIK	scl42543.8.1_3						F730043M19Rik		ILMN_1256977	002570475	S	12	GTTACAGTAGCCCCAGAGCTCTCCTTGCAGATGAAGTAGAAGCCTGGGTC										
Mus musculus	RefSeq	ILMN_237214	ILMN_237214	NPY5R	NM_016708.1	NM_016708.1		18168	7710071	NM_016708.1	Npy5r	NP_057917.1	ILMN_3002189	006510195	S	1510	GAGAGCCCTTATCCACTGCCTACACATGTCATGATTCTCTCTGTGCACCG	8	-	69609708-69609727:69609728-69609757	8qB3.2-qB3.3	Mus musculus neuropeptide Y receptor Y5 (Npy5r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IDA]; Combining with pancreatic polypeptide PP to initiate a change in cell activity [goid 1602] [evidence IDA]; Combining with gut peptide YY to initiate a change in cell activity [goid 1601] [evidence IDA]	MGC151353; MGC151355; Y5R	MGC151353; MGC151355; Y5R
Mus musculus	RefSeq	ILMN_220256	ILMN_220256	CCM2	NM_146014.2	NM_146014.2		216527	118130250	NM_146014.2	Ccm2	NP_666126.1	ILMN_2719834	000070292	S	1060	CTATCCATGAGTTTTGCATCAGCCTGCGGCAGCTCTATGGGGACAGCCGC	11	+	6494224-6494273	11qA1	Mus musculus cerebral cavernous malformation 2 homolog (human) (Ccm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-169J19.3; MGC37115; BC029157	RP23-169J19.3; MGC37115; BC029157
Mus musculus	MEEBO	ILMN_213225	ILMN_213225	CRYAA	scl50871.3.3_25	NM_013501.1			30794509	NM_013501.1	Cryaa		ILMN_2634888	004210647	S	374	CACCGTGAAGGTACTGGAGGATTTTGTGGAGATTCACGGCAAACACAACG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A microtubule-based process that occurs only during M phase of the cell cycle [goid 72] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence TAS]		
Mus musculus	MEEBO	ILMN_193020	ILMN_193020	1110051M20RIK	scl18995.12_704				31324548	NM_175123	1110051M20Rik		ILMN_2493415	002490358	S	18	GCTATTGGTTGTCGTCTTAATAATGCACACCGAATGATGAGTGCTCAGCC										
Mus musculus	RefSeq	ILMN_219991	ILMN_242147	ARAP1	NM_001040112.1	NM_001040112.1		69710	92091596	NM_001040112.1	Arap1	NP_001035201.1	ILMN_1241458	005720594	S	5168	CTCATTGCCACCCTATCTCAAAGGCTTAGTGAGCAGACTTGCTGGTGTCC	7	+	108560954-108561003	7qE3	Mus musculus ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 (Arap1), transcript variant 4, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2410002L19Rik; mKIAA0782	2410002L19Rik; mKIAA0782
Mus musculus	RefSeq	ILMN_242147	ILMN_242147	ARAP1	NM_001040112.1	NM_001040112.1		69710	92091596	NM_001040112.1	Arap1	NP_001035201.1	ILMN_3138028	000770538	A	5117	GACAGACTGGAGACTTCTGGGAAAGTGCTAAGCTTCTGCCTTCTCTGGAG	7	+	108560903-108560952	7qE3	Mus musculus ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 (Arap1), transcript variant 4, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2410002L19Rik; mKIAA0782	2410002L19Rik; mKIAA0782
Mus musculus	RefSeq	ILMN_212238	ILMN_242147	ARAP1	NM_001040112.1	NM_001040112.1		69710	92091596	NM_001040112.1	Arap1	NP_001035201.1	ILMN_2624303	003780307	S	1641	TATCACCTGGAGGCCAAGTACAGAGAGGGCAAGTACCGCCGCTACCATCC	7	+	108542063-108542112	7qE3	Mus musculus ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 (Arap1), transcript variant 4, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2410002L19Rik; mKIAA0782	2410002L19Rik; mKIAA0782
Mus musculus	Riken	ILMN_201792	ILMN_201792	IKBKB	ri|2610009E10|ZX00055N01|AK011359|1117					AK011359	Ikbkb		ILMN_1235547	004920053	S	833	GGGCTGTGTCTGTGTGCCTTTAGGAAGAGCCTGGAACCTCTGTGTGCCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The process of introducing a phosphate group into an I-kappaB protein [goid 7252] [evidence TAS]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + IkappaB protein = ADP + IkappaB phosphoprotein [goid 8384] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA];  [goid 4702] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211316	ILMN_211316	OLFR959	NM_146508.1	NM_146508.1		258501	27544952	NM_146508.1	Olfr959	NP_666719.1	ILMN_2614582	003450273	S	754	CCAGTTGTCCTCATATACTTAAGACCAACTCCAAGCCCTTGGCTGGATGC	9	-	39380039-39380088	9qA5.1	Mus musculus olfactory receptor 959 (Olfr959), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	M34; MOR224-3; ORL583	M34; MOR224-3; ORL583
Mus musculus	RefSeq	ILMN_215234	ILMN_215234	SH2D6	XM_355785.4	XM_355785.4		71130	94377474	XM_355785.4	Sh2d6	XP_355785.3	ILMN_2671584	007380079	S	448	TCTGAGCTCCAAAGCCCTGATACCTCCAGTTCCTCTGCCAAGAACATCTG	6	-	72467110-72467159	6qC1	PREDICTED: Mus musculus SH2 domain containing 6, transcript variant 1 (Sh2d6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215234	ILMN_215234	SH2D6	XM_355785.4	XM_355785.4		71130	94377474	XM_355785.4	Sh2d6	XP_355785.3	ILMN_1239727	005550288	S	643	GCCTTGGTACTCTGGAAACTGTGACCGTCAGTCTGTTGAGAGAGCCCTGC	6	-	72465549-72465598	6qC1	PREDICTED: Mus musculus SH2 domain containing 6, transcript variant 1 (Sh2d6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215234	ILMN_215234	SH2D6	XM_355785.4	XM_355785.4		71130	94377474	XM_355785.4	Sh2d6	XP_355785.3	ILMN_2743312	006370333	S	772	ACTCCTCAGAGGCCGTGTCTTCAACATTCCCATCCGGCAACTGGACGGTG	6	-	72465263-72465312	6qC1	PREDICTED: Mus musculus SH2 domain containing 6, transcript variant 1 (Sh2d6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_228300	ILMN_228300	MYBBP1A	NM_016776.2	NM_016776.2		18432	31982723	NM_016776.2	Mybbp1a	NP_058056.2	ILMN_2987339	001090524	S	3988	CAGAGTGGGGTCAAGAAAAGGAGAGTGGCCAGCAGGAGAGTGCAGACACC	11	+	72264923-72264972	11qB4	Mus musculus MYB binding protein (P160) 1a (Mybbp1a), mRNA.	A protein complex which usually consists of three components, e.g. in Xenopus, the importin alpha and beta-subunits and any protein which has a nuclear localization sequence (NLS). The complex acts to import proteins with an NLS into the nucleus through a nuclear pore [goid 42564] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IDA]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]	AU019902; p160MBP; P160; p67MBP; AL024407	AU019902; p160MBP; P160; p67MBP; AL024407
Mus musculus	RefSeq	ILMN_196311	ILMN_228300	MYBBP1A	NM_016776.2	NM_016776.2		18432	31982723	NM_016776.2	Mybbp1a	NP_058056.2	ILMN_1255110	006020373	S	2839	GGTCATAAGTTACACGGAGCTGACACAGAGGACTCAGAGGACCAGGCTGC	11	+	72262427-72262465:72262545-72262555	11qB4	Mus musculus MYB binding protein (P160) 1a (Mybbp1a), mRNA.	A protein complex which usually consists of three components, e.g. in Xenopus, the importin alpha and beta-subunits and any protein which has a nuclear localization sequence (NLS). The complex acts to import proteins with an NLS into the nucleus through a nuclear pore [goid 42564] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IDA]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]	AU019902; p160MBP; P160; p67MBP; AL024407	AU019902; p160MBP; P160; p67MBP; AL024407
Mus musculus	RefSeq	ILMN_196311	ILMN_228300	MYBBP1A	NM_016776.2	NM_016776.2		18432	31982723	NM_016776.2	Mybbp1a	NP_058056.2	ILMN_1216204	006860148	S	1861	CAGACTTGCATCAAGAAAAGCATGGAGCAGAATCCCCGCCGATCACGCTC	11	+	72260510-72260559	11qB4	Mus musculus MYB binding protein (P160) 1a (Mybbp1a), mRNA.	A protein complex which usually consists of three components, e.g. in Xenopus, the importin alpha and beta-subunits and any protein which has a nuclear localization sequence (NLS). The complex acts to import proteins with an NLS into the nucleus through a nuclear pore [goid 42564] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IDA]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]	AU019902; p160MBP; P160; p67MBP; AL024407	AU019902; p160MBP; P160; p67MBP; AL024407
Mus musculus	RefSeq	ILMN_246082	ILMN_246082	CPN1	NM_030703.1	NM_030703.1		93721	13507643	NM_030703.1	Cpn1	NP_109628.1	ILMN_2796199	005290278	S	1380	GTACTTACTCTGTCACTGCCAAGGCACCAGGGTACGACCCCAAAACAGTG	19	-	44034508-44034557	19qC3	Mus musculus carboxypeptidase N, polypeptide 1 (Cpn1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	0610011F20Rik; CPN	0610011F20Rik; CPN
Mus musculus	RefSeq	ILMN_209242	ILMN_209242	4922502D21RIK	NM_199034.3	NM_199034.3		381816	141802578	NM_199034.3	4922502D21Rik	NP_950199.1	ILMN_2593944	002940477	S	1342	GGACACAAATTTCGTGATGAGTCGGTATGAACAGAACGTGAGCACCCGGA	6	-	129272357-129272406	6qF3	Mus musculus RIKEN cDNA 4922502D21 gene (4922502D21Rik), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	MGC107125; Gm1074	MGC107125; Gm1074
Mus musculus	MEEBO	ILMN_192912	ILMN_192912	4930527E20RIK	scl21084.1.6_101						4930527E20Rik		ILMN_2492488	001940372	S	13	ATTACCCCCACCCTCCTAGGACAAGAAGAGCACAGGGGGCCTGGAAATCC										
Mus musculus	RefSeq	ILMN_219038	ILMN_219038	FOXC2	NM_013519.1	NM_013519.1		14234	8850212	NM_013519.1	Foxc2	NP_038547.1	ILMN_2703433	000580601	S	2234	CACCTGTGTTTGTCTTATGTGATCTCAGTGTTGTATTTACCTTAAAATAA	8	+	123642716-123642765	8qE1	Mus musculus forkhead box C2 (Foxc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IGI]; The process whose specific outcome is the progression of the lymphatic vasculature over time, from its formation to the mature structure [goid 1945] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [evidence ISS]; Lymph vessel formation when new vessels emerge from the proliferation of pre-existing vessels [goid 1946] [evidence ISS]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence ISS]; The expansion of a cardiac muscle cell population by cell division [goid 60038] [evidence IGI]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IGI]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IGI]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IGI]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IGI]; Any process that modulates the size of blood vessels [goid 50880] [evidence IGI]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IGI]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; The process by which a cell becomes committed to become a paraxial mesoderm cell [goid 48343] [evidence IMP]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IMP]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IGI]; The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 48341] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IGI]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]	Interacting selectively with DNA that is assembled into chromatin [goid 31490] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IGI]	Fkh14; MFH-1; Mfh1; Hfhbf3	Fkh14; MFH-1; Mfh1; Hfhbf3
Mus musculus	Riken	ILMN_202563	ILMN_202563	MYT1L	ri|2810003I18|ZX00053G11|AK012660|1661					AK012660	Myt1l		ILMN_1256161	007150722	S	1311	CACCACAGTGAGAGCGCCTTACACACCCCTGTGACACTCATGTTGGCTTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_206079	ILMN_229075	OTTMUSG00000007026	XM_001002326.1	XM_001002326.1		545557	94369810	XM_001002326.1	OTTMUSG00000007026	XP_001002326.1	ILMN_1238787	004860040	S	1256	ATGGCAGATGCAAGAGGACCAGAAGCCTCACACTCCTGCCGCCATGCCTT	3	+	100327620-100327669	3qF2.2	PREDICTED: Mus musculus predicted gene, OTTMUSG00000007026 (OTTMUSG00000007026), mRNA.					
Mus musculus	RefSeq	ILMN_212598	ILMN_212598	SCLY	NM_016717.3	NM_016717.3		50880	111074526	NM_016717.3	Scly	NP_057926.2	ILMN_2628281	003390484	S	1870	TGATGGTCCGCAGATGTCCCATGCCTTGTCCCCGGAAGTCGAAGCTTACC	1	+	93217320-93217369	1qD	Mus musculus selenocysteine lyase (Scly), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-selenocysteine + reduced acceptor = hydrogen selenide + L-alanine + acceptor [goid 9000] [evidence IEA]	A930015N15Rik; 9830169H08; SCL; Scly2; Scly1	A930015N15Rik; 9830169H08; SCL; Scly2; Scly1
Mus musculus	MEEBO	ILMN_189343	ILMN_189343	V1RD4	scl081014.1_114	NM_030739.1			13507701	NM_030739.1	V1rd4		ILMN_1227062	007550215	S	7	AGGTGGAACAACAGTATGAACTAACCACTACCCTCCCCGCCCCACAGAGC								Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213437	ILMN_213437	RAD23A	NM_009010.2	NM_009010.2		19358	34447210	NM_009010.2	Rad23a	NP_033036.2	ILMN_2637052	001850746	S	951	ACATCTCTGATGTAGAGGGGGAGGTTGGTGCCATAGGTGAGGAGGCCCCA	8	-	87725910-87725959	8qC3	Mus musculus RAD23a homolog (S. cerevisiae) (Rad23a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IGI]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]	2310040P19Rik; mHR23A; AL024030	2310040P19Rik; mHR23A; AL024030
Mus musculus	MEEBO	ILMN_212438	ILMN_212438	MSR2	scl21994.9.1_30				13540504	NM_030707	Msr2		ILMN_1219764	000450091	S	822	GTTCTGTGGCTAAAGGCACTGGGCTAATCACATTCTCCTGGCATAGGCAG										
Mus musculus	RefSeq	ILMN_210586	ILMN_210586	ADCY8	NM_009623.2	NM_009623.2		11514	124430531	NM_009623.2	Adcy8	NP_033753.2	ILMN_2607127	004200546	S	4827	GAACAGCAATTCGGGCATCATCAAGAGCCATTACAACCGGCGGACTTTGC	15	-	64530759-64530808	15qD1	Mus musculus adenylate cyclase 8 (Adcy8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IGI]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence IGI]	AW060868; AC8	AW060868; AC8
Mus musculus	RefSeq	ILMN_201229	ILMN_201229	LOC382091	XM_356173.1	XM_356173.1			38089989	XM_356173.1	LOC382091		ILMN_2541546	004900092	S	398	AGGTAGAGCGTCACAGAGAACATCTTATTAACTACATTATATTTTTGAGA										
Mus musculus	Riken	ILMN_202633	ILMN_202633	8030455F02RIK	ri|8030455F02|PX00103L24|AK020208|1266					AK020208	8030455F02Rik		ILMN_2551098	004560546	S	664	CTTTAGAGACGCACTTCTTACCGGCTTCGGAGGTGACTGTGCCTGTAGGG										
Mus musculus	RefSeq	ILMN_198629	ILMN_198629	MEGF8	XM_194337.7	XM_194337.7		269878	149256457	XM_194337.7	Megf8	XP_194337.7	ILMN_2685985	003130544	S	9792	GTGCATGTCAGCATGGGTCACATCTCTATGATAGGAGGGCAACTGAGGCA	7	+	26150863-26150912	7qA3	PREDICTED: Mus musculus multiple EGF-like-domains 8 (Megf8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198629	ILMN_198629	MEGF8	XM_194337.7	XM_194337.7		269878	149256457	XM_194337.7	Megf8	XP_194337.7	ILMN_1245455	003140440	S	5044	TACCACGAGGCCACCGACTCCCTCTATGTGTTTGGGGGTTTCCGCTTCCA	7	+	26133957-26134006	7qA3	PREDICTED: Mus musculus multiple EGF-like-domains 8 (Megf8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216882	ILMN_216882	STK32C	NM_021302.1	NM_021302.1		57740	10946599	NM_021302.1	Stk32c	NP_067277.1	ILMN_2796568	001450040	S	1925	CCTTGTGGCCAGTCTTCGCTGTGGCCTAGTCAGAATGTTCTTGAGCCTGC	7	-	138955145-138955194	7qF4	Mus musculus serine/threonine kinase 32C (Stk32c), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	YANK3; Pkek; PKE	YANK3; Pkek; PKE
Mus musculus	MEEBO	ILMN_194654	ILMN_194654	IKBKB	scl35019.22_6				33469100	NM_010546	Ikbkb		ILMN_2589556	001400520	S	3770	TGTGCTGGTCGCTGTGGCAAACGACCTTTGACTATGCTGTAGTGATGGCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The process of introducing a phosphate group into an I-kappaB protein [goid 7252] [evidence TAS]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + IkappaB protein = ADP + IkappaB phosphoprotein [goid 8384] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA];  [goid 4702] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211192	ILMN_211192	PSMB5	NM_011186.1	NM_011186.1		19173	6755203	NM_011186.1	Psmb5	NP_035316.1	ILMN_2613469	003290187	S	430	CGCTAACATGGTGTATCAGTACAAAGGCATGGGGCTGTCTATGGGCACCA	14	-	55235381-55235430	14qC3	Mus musculus proteasome (prosome, macropain) subunit, beta type 5 (Psmb5), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	MGC118075	MGC118075
Mus musculus	Riken	ILMN_204095	ILMN_204095	9630046G05RIK	ri|9630046G05|PX00116C18|AK036217|4029					AK036217	9630046G05Rik		ILMN_1217571	003610722	S	3511	GTCGACCCACCTTCACAGGACACATTCCTCTGGCTCCTGATGTGAGTGAG										
Mus musculus	RefSeq	ILMN_198321	ILMN_245839	MPP7	NM_001081287.1	NM_001081287.1		75739	124486852	NM_001081287.1	Mpp7	NP_001074756.1	ILMN_1240416	004010070	S	1759	CAGAGATGACCAAGGGACTGCAAAGCCCTTCACGGAAGAAGACTTTCAGG	18	-	7351126-7351142:7353152-7353184	18qA1	Mus musculus membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) (Mpp7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110068J02Rik; 5430426E14Rik; 2810038M04Rik; Gm955; AI415104	1110068J02Rik; 5430426E14Rik; 2810038M04Rik; Gm955; AI415104
Mus musculus	Riken	ILMN_203037	ILMN_203037	MEIS1	ri|6720477P20|PX00060C14|AK032947|2638					AK032947	Meis1		ILMN_1248401	004850193	S	2380	GGCCAGCCACTCCACTGTTTTCCTCTGAAAGTTTTACCACGGTCACTGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IC ]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197578	ILMN_197578	LOC380934	XM_358469.1	XM_358469.1			38076655	XM_358469.1	LOC380934		ILMN_2528622	002260053	S	230	CTTCCCTGGGCTGGAGAATCAAGCAAGAGAGTGGTCATGTGTGACTTCCT										
Mus musculus	RefSeq	ILMN_198307	ILMN_320292	AK220484	NM_001083628.1	NM_001083628.1		381157	134947987	NM_001083628.1	AK220484	NP_001077097.1	ILMN_1234439	006280048	S	874	ACCTAGTCAGGACCTCCCAGGGCGTGTTATCAAAGGGACCTCTCATCTGC	18	+	10474337-10474386	18qA1	Mus musculus cDNA sequence AK220484 (AK220484), mRNA.				mKIAA4095; KIAA4095	mKIAA4095; KIAA4095
Mus musculus	RefSeq	ILMN_221344	ILMN_221344	STARD8	NM_199018.1	NM_199018.1		236920	39841034	NM_199018.1	Stard8	NP_950183.1	ILMN_2998807	004860445	S	4590	GTGGTGGTTTGTAGCCATCGTTGTGATGTTAATCCTGTTTTGTCTGTGCC	X	+	96269778-96269827	XqC3	Mus musculus START domain containing 8 (Stard8), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	KIAA0189; mKIAA0189	KIAA0189; mKIAA0189
Mus musculus	RefSeq	ILMN_221344	ILMN_221344	STARD8	NM_199018.1	NM_199018.1		236920	39841034	NM_199018.1	Stard8	NP_950183.1	ILMN_1257855	001400601	S	4137	CCTCATGCCTTTTGCCTACAGTGGTGGTCTATAAGAACAGTCCTTTTGGC	X	+	96269325-96269374	XqC3	Mus musculus START domain containing 8 (Stard8), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	KIAA0189; mKIAA0189	KIAA0189; mKIAA0189
Mus musculus	Riken	ILMN_205574	ILMN_205574	SQLE	ri|A530090A12|PX00143I10|AK041198|1264					AK041198	Sqle		ILMN_2573600	005570468	S	973	GTGCTCTGGGCAGGCAGACACAGGCAGAGCTGCTGGGCACTTTTCCACAG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the formation of a 2,3-epoxide in squalene [goid 4506] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184532	ILMN_184532	TXNL1	scl51342.8_612				31543901	NM_016792	Txnl1		ILMN_2419427	003170575	S	9	CCATCCTGAAGTTGTTAATCACACCTGAAATGGAGAAGAAGATGAACATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]			
Mus musculus	Riken	ILMN_201849	ILMN_201849	5730533B08RIK	ri|5730533B08|PX00006K11|AK017801|2010					AK017801	5730533B08Rik		ILMN_2545071	005090494	S	1519	CCTCCAAAGGCACACCCCTAATGACCTATAACCTTTCACTATGCCCCACC										
Mus musculus	RefSeq	ILMN_214012	ILMN_214012	NTRK3	NM_008746.4	NM_008746.4		18213	33413411	NM_008746.4	Ntrk3	NP_032772.3	ILMN_1253641	000870110	S	2370	GGGGTGCTGGCAGAGGGAACCACAGCAGCGGCTGAATATTAAGGAGATCT	7	-	85337503-85337552	7qD3	Mus musculus neurotrophic tyrosine kinase, receptor, type 3 (Ntrk3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IMP]; Any process that activates, maintains or increases the rate of axon extension involved in regeneration [goid 48691] [evidence IGI]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	TrkC; AW125844	TrkC; AW125844
Mus musculus	RefSeq	ILMN_211896	ILMN_211896	SLC2A8	NM_019488.4	NM_019488.4		56017	118130693	NM_019488.4	Slc2a8	NP_062361.1	ILMN_2696642	001440523	S	647	ATGCCCGAGACCCCACGTTTTCTCCTCACTCAACACCAGTACCAGGAGGC	2	-	32832453-32832502	2qB	Mus musculus solute carrier family 2, (facilitated glucose transporter), member 8 (Slc2a8), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence TAS]; The directed movement of fructose into, out of, within or between cells. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 15755] [evidence ISO]; The directed movement of galactose into, out of, within or between cells. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 15757] [evidence ISO]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Interacting selectively with the D- or L-enantiomer of glucose [goid 5536] [evidence IDA]; Catalysis of the transfer of galactose from one side of the membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 5354] [evidence ISO]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose(out) = fructose(in) [goid 15284] [evidence ISO]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	D2Ertd44e; GlutX1; GLUT8	D2Ertd44e; GlutX1; GLUT8
Mus musculus	RefSeq	ILMN_211896	ILMN_211896	SLC2A8	NM_019488.4	NM_019488.4		56017	118130693	NM_019488.4	Slc2a8	NP_062361.1	ILMN_2664819	002850040	S	146	CTGGGACCCCTCAGCTTCGGCTTCGCGCTCGGCTACAGCTCCCCCGCCAT	2	-	32837307-32837356	2qB	Mus musculus solute carrier family 2, (facilitated glucose transporter), member 8 (Slc2a8), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence TAS]; The directed movement of fructose into, out of, within or between cells. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 15755] [evidence ISO]; The directed movement of galactose into, out of, within or between cells. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 15757] [evidence ISO]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Interacting selectively with the D- or L-enantiomer of glucose [goid 5536] [evidence IDA]; Catalysis of the transfer of galactose from one side of the membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 5354] [evidence ISO]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose(out) = fructose(in) [goid 15284] [evidence ISO]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	D2Ertd44e; GlutX1; GLUT8	D2Ertd44e; GlutX1; GLUT8
Mus musculus	RefSeq	ILMN_211896	ILMN_211896	SLC2A8	NM_019488.4	NM_019488.4		56017	118130693	NM_019488.4	Slc2a8	NP_062361.1	ILMN_1213148	002190673	S	1783	TTTCCTGGCTGGGGTGCCCGGTCCTAAGCAGCCGCCTGTACCTCACTTGA	2	-	32828759-32828808	2qB	Mus musculus solute carrier family 2, (facilitated glucose transporter), member 8 (Slc2a8), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence TAS]; The directed movement of fructose into, out of, within or between cells. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 15755] [evidence ISO]; The directed movement of galactose into, out of, within or between cells. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 15757] [evidence ISO]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Interacting selectively with the D- or L-enantiomer of glucose [goid 5536] [evidence IDA]; Catalysis of the transfer of galactose from one side of the membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 5354] [evidence ISO]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose(out) = fructose(in) [goid 15284] [evidence ISO]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	D2Ertd44e; GlutX1; GLUT8	D2Ertd44e; GlutX1; GLUT8
Mus musculus	Riken	ILMN_204925	ILMN_204925	C230059C13RIK	ri|C230059C13|PX00176E19|AK048772|1427					AK048772	C230059C13Rik		ILMN_1246538	003890044	S	1215	AGTCCTGGCTGGGCACAACTGAGGAGGCAGAAACCTGCCCTAAGAGCTGA										
Mus musculus	RefSeq	ILMN_189005	ILMN_225884	MARCH7	NM_020575.2	NM_020575.2		57438	118130502	NM_020575.2	March7	NP_065600.1	ILMN_2711892	000870131	S	2524	CCAAGCATTTTTCCTTTTGGTGAGTGGGAAAGCATTACCCTTGTTTGAAA	2	+	60086247-60086296	2qC1.1	Mus musculus membrane-associated ring finger (C3HC4) 7 (March7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Axot; Axo	Axot; Axo
Mus musculus	RefSeq	ILMN_189005	ILMN_225884	MARCH7	NM_020575.2	NM_020575.2		57438	118130502	NM_020575.2	March7	NP_065600.1	ILMN_2676940	005360148	S	948	GGTTCATCTCAGAGACCATATCGAGAATCTTCTGACAATGAAGGTAGGCG	2	+	60072225-60072274	2qC1.1	Mus musculus membrane-associated ring finger (C3HC4) 7 (March7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Axot; Axo	Axot; Axo
Mus musculus	RefSeq	ILMN_199122	ILMN_199122	LOC380692	XM_354604.1	XM_354604.1			38091323	XM_354604.1	LOC380692		ILMN_1240350	006860307	S	469	ACCAGCCACTCACAGAGGCCTCTTATGTCTGATGTGGTGGATGCTGGCCA										
Mus musculus	RefSeq	ILMN_191877	ILMN_191877	V1RI2	NM_134219.1	NM_134219.1		171253	21717754	NM_134219.1	V1ri2	NP_598980.1	ILMN_2926202	002490379	S	103	GCCTTGGGGACTGAGAAGAAACCTGTCGACCTTATTGTAATCCACTTGGC	13	+	23167763-23167812	13qA3.1	Mus musculus vomeronasal 1 receptor, I2 (V1ri2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	MEEBO	ILMN_187895	ILMN_187895	SCL0002312.1_1	scl0002312.1_1	AK009141.1			12843751	AK009141.1	scl0002312.1_1		ILMN_1230199	000940735	S	11	GCAGGAGTTTGTGAGACCAGAAAGGGGAGTACAGGATCGCCTGGAACTGG										
Mus musculus	RefSeq	ILMN_213099	ILMN_245407	CCDC88C	NM_026681.4	NM_026681.4		68339	118130255	NM_026681.4	Ccdc88c	NP_080957.2	ILMN_1225808	001450010	S	6206	GCAAATGCTAAACTACTGGTGCGCCTTCTGATTACAATGGCCTTTCCCCC	12	-	102150946-102150995	12qE	Mus musculus coiled-coil domain containing 88C (Ccdc88c), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IPI]; Any process that decreases the stability of a protein, making it more vulnerable to degradative processes or aggregation [goid 31648] [evidence IMP]	Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IPI]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IPI]	AV000935; Daple; mKIAA1509; 0610010D24Rik; AW324073	AV000935; Daple; mKIAA1509; 0610010D24Rik; AW324073
Mus musculus	RefSeq	ILMN_245407	ILMN_245407	CCDC88C	NM_026681.4	NM_026681.4		68339	118130255	NM_026681.4	Ccdc88c	NP_080957.2	ILMN_2807229	000110711	S	6088	ACTTCAGTCAAGGGAGCAGTTCAAAGAGCACACCGGCGTCCCCAGAGCCA	12	-	102151064-102151113	12qE	Mus musculus coiled-coil domain containing 88C (Ccdc88c), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IPI]; Any process that decreases the stability of a protein, making it more vulnerable to degradative processes or aggregation [goid 31648] [evidence IMP]	Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IPI]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IPI]	AV000935; Daple; mKIAA1509; 0610010D24Rik; AW324073	AV000935; Daple; mKIAA1509; 0610010D24Rik; AW324073
Mus musculus	RefSeq	ILMN_221940	ILMN_239968	ASB18	NM_139152.1	NM_139152.1		208372	21040226	NM_139152.1	Asb18	NP_631891.1	ILMN_1238496	003840707	S	1316	AGGAGAGCGTTCACCTTGTGCCCCAGCTACCATTACCTGAGACTCTGCAA	1	-	91849291-91849340	1qD	Mus musculus ankyrin repeat and SOCS box-containing 18 (Asb18), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Asb-18	Asb-18
Mus musculus	RefSeq	ILMN_194602	ILMN_236728	DDX27	NM_153065.3	NM_153065.3		228889	142379510	NM_153065.3	Ddx27	NP_694705.2	ILMN_2507890	001940768	S	1836	AGGGAAAGAGACAGCAGACCAGGAGCCTGAGAGGAGCTGGTTCCAGACCA	2	+	166857080-166857129	2qH3	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 (Ddx27), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	C86129	C86129
Mus musculus	RefSeq	ILMN_199522	ILMN_199522	LOC382668	XM_356618.1	XM_356618.1			38073960	XM_356618.1	LOC382668		ILMN_1243788	006290138	S	555	GGAGCCAGGGCCTCATGTGACTGCCCCAGCCCAAGTTCCGTTAAGTGTTT										
Mus musculus	RefSeq	ILMN_216502	ILMN_235717	BC050078	NM_178417.2	NM_178417.2		237775	142364725	NM_178417.2	BC050078	NP_848504.1	ILMN_1232229	002970491	S	2365	GCTAGAACTCATCTAGAAAAAGACTATTGGGTACAGGAAGTACTGAGCTC	11	-	59275696-59275745	11qB1.3	Mus musculus cDNA sequence BC050078 (BC050078), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC60963	MGC60963
Mus musculus	MEEBO	ILMN_194447	ILMN_194447	NAV1	scl16246.32_24				28077104	NM_173437	Nav1		ILMN_1223704	003440315	S	3409	AAGAATCACCCGATCCAACAGCATCCCCACCCACGAGGCGGCCTTCGAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194447	ILMN_194447	NAV1	scl16246.32_24				28077104	NM_173437	Nav1		ILMN_2506489	006380201	S	2	GACTCCTCAGAAAGGAAAAACTGGGTCCCACAATCTCCAGGCACCTTCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200464	ILMN_200464	LOC384307	XM_357558.1	XM_357558.1			38082269	XM_357558.1	LOC384307		ILMN_2538852	005270446	S	664	ATTTTAGTGCTGGCCCTCATCTTAGGAATAACTGCCTGGGGTTATAAGTA										
Mus musculus	MEEBO	ILMN_186427	ILMN_186427	9530025L16RIK	scl1282.1.1_75				50872130	NM_175256	9530025L16Rik		ILMN_2435467	003310593	S	3	GCTAGCCTCATAGCTAGGAAGCAGTTAAGCAAATATGGACTAGTGGGGGC										
Mus musculus	MEEBO	ILMN_186427	ILMN_186427	9530025L16RIK	scl1282.1.1_75				50872130	NM_175256	9530025L16Rik		ILMN_1213656	000110767	S	3528	GGAGCCTCAAGCCCCACAGAATGAAGTACTCTGTTCCTGGGAAGAATTCC										
Mus musculus	Riken	ILMN_202069	ILMN_202069	2610315N17RIK	ri|2610315N17|ZX00062I04|AK012034|820					AK012034	2610315N17Rik		ILMN_1240341	006100243	S	695	CCGGGGTTTGGCAGTTACCCTGATTGCGGGTGGAGGAGGCGTTCTGATTT										
Mus musculus	RefSeq	ILMN_222211	ILMN_222211	SLC26A3	NM_021353.2	NM_021353.2		13487	118130487	NM_021353.2	Slc26a3	NP_067328.1	ILMN_2746346	002100367	S	2526	AACTTTGGAACGAGATTGTTCTAGCATGGTATATTTTTCACATATCTAGT	12	+	32158482-32158531	12qA3	Mus musculus solute carrier family 26, member 3 (Slc26a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA];  [goid 15380] [evidence IDA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	9030623B18Rik; Dra; AV376035; 9130013M11Rik	9030623B18Rik; Dra; AV376035; 9130013M11Rik
Mus musculus	RefSeq	ILMN_208884	ILMN_208884	OOG4	NM_173773.1	NM_173773.1		242737	30424638	NM_173773.1	Oog4	NP_776134.1	ILMN_2590473	001570168	S	1729	TGTCAATTGCTGATAGGAGCATGGTTATGTCAAGCACCTAAATGTCTGAC	4	-	143027247-143027296	4qE1	Mus musculus oogenesin 4 (Oog4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	E330017M15	E330017M15
Mus musculus	RefSeq	ILMN_261391	ILMN_261391	ANKRD6	NM_001012450.1	NM_001012450.1		140577	60218879	NM_001012450.1	Ankrd6	NP_001012453.1	ILMN_3052373	000380131	I	240	GTAACACTTCCTGTCACGGGGTGGTGGGAGGCCAGTGGAAGAGAGACTTC	4	-	32961261-32961310	4qA5	Mus musculus ankyrin repeat domain 6 (Ankrd6), transcript variant 1, mRNA.					
Mus musculus	MEEBO	ILMN_218570	ILMN_218570	CD3D	scl37022.6.1_3	NM_013487.1			7304950	NM_013487.1	Cd3d		ILMN_2697415	000610324	S	458	AGATCGTGAAGATACCCAGTACAGCCGTCTTGGAGGGAACTGGCCCCGGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISO]; A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein [goid 42105] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence NAS]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_195248	ILMN_195248	CUL5	scl35846.21_29				28076980	NM_027807	Cul5		ILMN_2513849	000620010	S	18	CGACTTTCACAGTTCTTGGAAGGGATCCCTGAGTTTACCAGCGTGCTCAC						Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_209221	ILMN_209221	SPINK4	scl25544.3.11_30	NM_011463.1			33469114	NM_011463.1	Spink4		ILMN_2593736	006130722	S	191	TGTCCCCAGACACCCAACCTGATCTGTGGCACGGATGGGCTCACATATGA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215125	ILMN_215125	2210018M11RIK	scl0069575.1_14	XM_356003.1			38088194	XM_356003.1	2210018M11Rik		ILMN_1253453	005860703	S	2865	GGCAGGAGCATCCCTGAGACACCTACCTTGTGGTGGTGATTGTCCCCATT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]			
Mus musculus	RefSeq	ILMN_210445	ILMN_210445	F12	NM_021489.1	NM_021489.1		58992	10946899	NM_021489.1	F12	NP_067464.1	ILMN_2938668	006560291	S	1670	GTGTGAGGAAGGAACTGCAGAACATCAGCTCACCCTGCGCGGAGTCATCA	13	-	55519553-55519602	13qB1	Mus musculus coagulation factor XII (Hageman factor) (F12), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IMP]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]; Any process that modulates the frequency, rate or extent of blood coagulation [goid 30193] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]		
Mus musculus	RefSeq	ILMN_210445	ILMN_210445	F12	NM_021489.1	NM_021489.1		58992	10946899	NM_021489.1	F12	NP_067464.1	ILMN_2605656	001090343	S	707	TGGAACTACGCAATCGGGTGCGCCATGTCAGCGGTGGACCGTGGAGGCCA	13	-	55522666-55522715	13qB1	Mus musculus coagulation factor XII (Hageman factor) (F12), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IMP]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]; Any process that modulates the frequency, rate or extent of blood coagulation [goid 30193] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]		
Mus musculus	RefSeq	ILMN_210445	ILMN_210445	F12	NM_021489.1	NM_021489.1		58992	10946899	NM_021489.1	F12	NP_067464.1	ILMN_2746692	006510014	S	1565	CAACTCTAACGTGCACGGAGACGCCATTCTCCCTGGGATGCTTTGCGCTG	13	-	55519743-55519792	13qB1	Mus musculus coagulation factor XII (Hageman factor) (F12), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IMP]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]; Any process that modulates the frequency, rate or extent of blood coagulation [goid 30193] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]		
Mus musculus	MEEBO	ILMN_187461	ILMN_187461	ZCCHC8	scl26051.15_378				21312623	NM_027494	Zcchc8		ILMN_2444338	006860703	S	2	GCCCCAGTGATGTGACTATGGAAGTCTTAGCTGATCTACATCAGAAGTTA						A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215216	ILMN_215216	TMEM53	NM_026837.1	NM_026837.1		68777	21312109	NM_026837.1	Tmem53	NP_081113.1	ILMN_2859917	006100392	S	902	TTGTGTCCAATGCTGAGGTCCTGCTCCGGAAATAAACGCCGACACCTCCC	4	+	116766461-116766475:116766476-116766510	4qD1	Mus musculus transmembrane protein 53 (Tmem53), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1500001P22Rik; 1110038M16Rik; 1700012A05Rik	1500001P22Rik; 1110038M16Rik; 1700012A05Rik
Mus musculus	RefSeq	ILMN_211208	ILMN_226219	LOC635601	XM_991578.1	XM_991578.1		635601	94378693	XM_991578.1	LOC635601	XP_996672.1	ILMN_1233413	000450327	S	66	GCTCTGGATTCAGGAAACCAACGGTGATGTTGTGATGACCCAGACTCCAC					PREDICTED: Mus musculus similar to Ig kappa chain V-II region RPMI 6410 precursor (LOC635601), mRNA.					
Mus musculus	RefSeq	ILMN_188254	ILMN_226219	LOC635601	XM_991578.1	XM_991578.1		635601	94378693	XM_991578.1	LOC635601	XP_996672.1	ILMN_2451103	005810575	S	70	TGGATTCAGGAAACCAACGGTGATGTTGTGATGACCCAGACTCCACTCAC					PREDICTED: Mus musculus similar to Ig kappa chain V-II region RPMI 6410 precursor (LOC635601), mRNA.					
Mus musculus	RefSeq	ILMN_193062	ILMN_193062	TRY4	NM_011646.5	NM_011646.5		22074	146231973	NM_011646.5	Try4	NP_035776.1	ILMN_2493756	006110100	S	445	GGGCAACACCTTGAGCTTTGGTGTGAACAACCCAGACCTGCTCCAGTGCC				6qB1	Mus musculus trypsin 4 (Try4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tc; 0910001B19Rik	Tc; 0910001B19Rik
Mus musculus	RefSeq	ILMN_208999	ILMN_208999	A730011L01RIK	NM_177394.2	NM_177394.2		338371	40254316	NM_177394.2	A730011L01Rik	NP_796368.1	ILMN_1238805	005420746	S	4672	GGGCTTGGGCTGGGATTTTGTCTTGTTTTGTTTTAACAGGGTCTGATCAC	11	+	119372367-119372416	11qE2	Mus musculus RIKEN cDNA A730011L01 gene (A730011L01Rik), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208999	ILMN_208999	A730011L01RIK	NM_177394.2	NM_177394.2		338371	40254316	NM_177394.2	A730011L01Rik	NP_796368.1	ILMN_1219272	004060370	S	3425	GCAAACTGAAGGAGCAGGGTGGATAGAACATAGAGTGTGGGCAAGTCTGG	11	+	119371120-119371169	11qE2	Mus musculus RIKEN cDNA A730011L01 gene (A730011L01Rik), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208999	ILMN_208999	A730011L01RIK	NM_177394.2	NM_177394.2		338371	40254316	NM_177394.2	A730011L01Rik	NP_796368.1	ILMN_2591589	004730390	S	1459	CCCCAAGGTGCCTGTCCTCAAGCTTGTTTGCCGCTGAGCTTGAGGGACCT	11	+	119369154-119369203	11qE2	Mus musculus RIKEN cDNA A730011L01 gene (A730011L01Rik), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222835	ILMN_241010	KCTD1	NM_134112.4	NM_134112.4		106931	124249323	NM_134112.4	Kctd1	NP_598873.2	ILMN_2755483	006980196	S	973	AGAAAAGGGACATTTGTGTGCAGCTGGGACAGTAAACCAAGCTCTGAACC	18	-	15127943-15127992	18qA1	Mus musculus potassium channel tetramerisation domain containing 1 (Kctd1), mRNA. XM_978900 XM_980194	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	4933402K10Rik; AW553000; AI661543	4933402K10Rik; AW553000; AI661543
Mus musculus	MEEBO	ILMN_186406	ILMN_186406	9530026P05RIK	scl0330385.5_255				50872164	NM_001002899	9530026P05Rik		ILMN_2435283	007380161	S	14	CACCAATAAGCCCAAGCTAAGAATGATGTCAAAAATGGTCTCAAAGGAAG										
Mus musculus	MEEBO	ILMN_186406	ILMN_186406	9530026P05RIK	scl0330385.5_255				50872164	NM_001002899	9530026P05Rik		ILMN_2649363	007650736	S	510	TAATGTTTAATCAAGGAAGTTGTAAAGGTTTAAATATATGTTCTATTTTG										
Mus musculus	RefSeq	ILMN_216573	ILMN_242543	SAMD9L	XM_620286.3	XM_620286.3		209086	94377053	XM_620286.3	Samd9l	XP_620286.1	ILMN_1224855	003940242	S	5233	GCTTGGCCCACAGTAGCATCAGCTATTCCATATCCTCAATTTGCATTCCC	6	-	3322303-3322352	6qA1	PREDICTED: Mus musculus sterile alpha motif domain containing 9-like, transcript variant 1 (Samd9l), mRNA.					
Mus musculus	RefSeq	ILMN_212135	ILMN_212135	4930535E21RIK	NM_029212.1	NM_029212.1		382077	41581457	NM_029212.1	4930535E21Rik	NP_083488.1	ILMN_2881312	004210612	S	2462	CGAAACTGGAAACCTCCCTGCCCAGCTCAGACAAGAAGCTCAACAGACCC	9	-	57826934-57826983	9qB	Mus musculus RIKEN cDNA 4930535E21 gene (4930535E21Rik), mRNA.				Gm1117; Tzip1	Gm1117; Tzip1
Mus musculus	RefSeq	ILMN_216729	ILMN_216729	MMP1A	NM_032006.3	NM_032006.3		83995	133778986	NM_032006.3	Mmp1a	NP_114395.1	ILMN_1226914	000990367	S	1633	TTTATGAACTAAAAGACTTTAGTACTACAACTGACAACCCAAGAAAGTCA	9	+	7476478-7476527	9qA1	Mus musculus matrix metallopeptidase 1a (interstitial collagenase) (Mmp1a), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Mcol-A; Mcola	Mcol-A; Mcola
Mus musculus	MEEBO	ILMN_223265	ILMN_223265	KRTAP6-2	scl0016701.1_246	NM_010673.1			6754495	NM_010673.1	Krtap6-2		ILMN_2761643	006840402	S	655	AGGCAACTTTGTGGTCCTGGCATCTGCAGTCTCGTCTCACTAGTTCTGCT						A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_188198	ILMN_311339	LOC100043822	XM_001481025.1	XM_001481025.1		100043822	149265866	XM_001481025.1	LOC100043822	XP_001481075.1	ILMN_2764770	001090725	S	3546	CGGACCCTCCCCCAAATACGAGTTTTCTTACTGACATGACAATTGGCTCC	14	-	118375156-118375205	14qE4	PREDICTED: Mus musculus hypothetical protein LOC100043822 (LOC100043822), mRNA.					
Mus musculus	RefSeq	ILMN_188198	ILMN_311339	LOC100043822	XM_001481025.1	XM_001481025.1		100043822	149265866	XM_001481025.1	LOC100043822	XP_001481075.1	ILMN_1220293	002030131	S	343	TTGTACGCATTCTGGAGACTTGCTATGTCATAGTTTGCTATAGCCCAGAC	14	-	118378359-118378408	14qE4	PREDICTED: Mus musculus hypothetical protein LOC100043822 (LOC100043822), mRNA.					
Mus musculus	Riken	ILMN_202898	ILMN_202898	6430558H08RIK	ri|6430558H08|PX00047L15|AK032470|2671					AK032470	6430558H08Rik		ILMN_2553162	002360494	S	2509	CTACCCTCAAATAGAGATGGGCTCTGTGAACAATGGCCAGGGGTCCTTTG										
Mus musculus	RefSeq	ILMN_185062	ILMN_255227	HMGA2	NM_010441.1	NM_010441.1		15364	6754209	NM_010441.1	Hmga2	NP_034571.1	ILMN_2681945	004230719	S	477	GCTGCCGAGCGTCCCAGTACCCGCAACTCCCGAGCCTTTGCGAGAGAGCA	10	-	119879502-119879551	10qD2	Mus musculus high mobility group AT-hook 2 (Hmga2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	pg; pygmy; Hmgic; HMGI-C; 9430083A20Rik; MGC103393	pg; pygmy; Hmgic; HMGI-C; 9430083A20Rik; MGC103393
Mus musculus	RefSeq	ILMN_198795	ILMN_320235	LOC330581	XM_001479144.1	XM_001479144.1		330581	149257414	XM_001479144.1	LOC330581	XP_001479194.1	ILMN_1232690	004730608	S	2430	GGCCTCCAGTGCAGGGCTGCTTCTTTGTATTTTTGCCCCAAAATGCTATT				7qD3	PREDICTED: Mus musculus similar to putative pheromone receptor (LOC330581), mRNA.					
Mus musculus	RefSeq	ILMN_209251	ILMN_209251	IL20	NM_021380.1	NM_021380.1		58181	10946715	NM_021380.1	Il20	NP_067355.1	ILMN_2925044	000460246	S	610	GGAGAGGCTGCTGAGAACACTCCTGTCCAAGAATCTCAGACCTCAGCACC	1	-	132803933-132803982	1qE4	Mus musculus interleukin 20 (Il20), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The transport of dimerized STAT (Signal Transducers and Activators of Transcription) proteins into the nucleus following activation by members of the janus activated kinase (JAK) family of tyrosine kinases [goid 7262] [evidence ISS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence NAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISS]; Interacting selectively with the interleukin-20 receptor [goid 45517] [evidence IDA]	Zcyto10; MGC130536	Zcyto10; MGC130536
Mus musculus	RefSeq	ILMN_222124	ILMN_222124	FYB	NM_011815.1	NM_011815.1		23880	33469118	NM_011815.1	Fyb	NP_035945.1	ILMN_3006219	004150414	S	2320	AAGTTGCGTCCTCCTTAACCTCTAAAAAGTGGGGAGCGAGAGATCTGCAG	15	+	6599631-6599680	15qA1	Mus musculus FYN binding protein (Fyb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IMP]		B630013F22Rik; ADAP	B630013F22Rik; ADAP
Mus musculus	RefSeq	ILMN_196757	ILMN_196757	EGFBP2	NM_010115.4	NM_010115.4		13647	85719297	NM_010115.4	Egfbp2	NP_034245.1	ILMN_2791241	006250468	S	615	GTGTGCAGGAGAGATGGGTGGAGGCAAAGACACTTGTAGGGATGACTCCG	7	+	43884399-43884437:43884807-43884817		Mus musculus epidermal growth factor binding protein type B (Egfbp2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Klk1b26; mGk-13; Egfbp-2	Klk1b26; mGk-13; Egfbp-2
Mus musculus	Riken	ILMN_205902	ILMN_205902	SH3D2A	ri|A730094K14|PX00153K19|AK043424|3234					AK043424	Sh3d2a		ILMN_1258078	004260131	S	2837	CACGTTGGAGAGGTTGGGTCGATAATAAACACATCAGCAAGGTGCAGAGC										
Mus musculus	RefSeq	ILMN_220268	ILMN_220268	OLFR376	NM_146922.1	NM_146922.1		258924	33239303	NM_146922.1	Olfr376	NP_667133.1	ILMN_1257456	003800347	S	885	GAGGAACAGAGACATGAAGGGGGCCCTAATTAGTGTTCTTTGCAAGAAGA	11	+	73189137-73189186	11qB4	Mus musculus olfactory receptor 376 (Olfr376), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR135-12; RP23-213I10.5	MOR135-12; RP23-213I10.5
Mus musculus	Riken	ILMN_205629	ILMN_205629	ACVRIP1-PENDING	ri|5430408M19|PX00022I10|AK030663|2500					AK030663	Acvrip1-pending		ILMN_1257695	002810008	S	2383	CGGGGCGGAGAACATAGTTTAGCAGTAGAGTGCTTGCCTAAAGCACCAGG										
Mus musculus	RefSeq	ILMN_200804	ILMN_200804	LOC384583	XM_357728.1	XM_357728.1			38086260	XM_357728.1	LOC384583		ILMN_1257403	007160438	S	158	GCAAGAACAGAGGCATCACCTGGGGAGAGGACACCCTCCTTGATGGAGTA										
Mus musculus	RefSeq	ILMN_201568	ILMN_201568	OLFR765	NM_146318.1	NM_146318.1		258315	33239321	NM_146318.1	Olfr765	NP_666430.1	ILMN_2911183	003130131	S	567	CACAAGCCTCATTGAAAAAGTTGTCTTTCTTGTGGCATCTGTGACCCTGG	10	-	128516401-128516450	10qD3	Mus musculus olfactory receptor 765 (Olfr765), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR115-4	MOR115-4
Mus musculus	RefSeq	ILMN_220687	ILMN_220687	GH	NM_008117.2	NM_008117.2		14599	42476098	NM_008117.2	Gh	NP_032143.1	ILMN_2725322	002060075	S	595	CGCGCTGCTCAAAAACTATGGGCTGCTCTCCTGCTTCAAGAAGGACCTGC	11	-	106161747-106161796	11qE1	Mus musculus growth hormone (Gh), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IGI]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence ISO]; Any process that modulates the frequency, rate or extent of the activity of any steroid hormone receptor signaling pathway [goid 33143] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat [goid 32094] [evidence IDA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with the growth hormone receptor [goid 5131] [evidence IPI]; Interacting selectively with the growth hormone receptor [goid 5131] [evidence ISO]; Interacting selectively with the growth hormone receptor [goid 5131] [evidence ISO]		
Mus musculus	RefSeq	ILMN_219754	ILMN_219754	TAS2R131	NM_207030.1	NM_207030.1		387356	46309602	NM_207030.1	Tas2r131	NP_996913.1	ILMN_2713240	003140156	S	865	CTGCAACATCTTAAAAGCCAGCTTCAAGAGCTGATCCTCTCCCTTCATAG	6	-	132906948-132906997	6qG1	Mus musculus taste receptor, type 2, member 131 (Tas2r131), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mt2r61; T2R31; Tas2r31; mGR31	mt2r61; T2R31; Tas2r31; mGR31
Mus musculus	RefSeq	ILMN_251285	ILMN_251285	ATE1	NM_001029895.2	NM_001029895.2		11907	118131185	NM_001029895.2	Ate1	NP_001025066.1	ILMN_3163403	001190092	A	1323	CTGCCGTTTCAACCAGGACCCCGAAGCAGAGGATGAAGGACGCAGTAAGG	7	-	137538229-137538250:137561962-137561989	7qF3	Mus musculus arginyltransferase 1 (Ate1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The posttranslational conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway [goid 16598] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Catalysis of the reaction: L-arginyl-tRNA + protein = tRNA + L-arginyl-protein [goid 4057] [evidence IDA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AI225793; AW547406	AI225793; AW547406
Mus musculus	Riken	ILMN_201735	ILMN_201735	1810054D07RIK	ri|1810054D07|ZX00043M07|AK007856|843					AK007856	1810054D07Rik		ILMN_1245075	004900167	S	614	CTGGGAGGCCTAAAGTGTTTCCGAGACAATCCATGAGACTGAACTGGCCC										
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_2750265	003130600	S	491	GGAGTTGATGGACCACGGCATTGTATCATGGGATACATTCTCAGTGGCCT	13	+	20366428-20366477	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_2672846	000130180	S	1204	GAACAGCAGCCGAGAAGATAAACATGAGTGCCCCTTCGGCCGCAGCAGTA	13	+	20464961-20465010	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_2628204	003450678	S	625	TGGTTCTCAACAGTCATGACCTCTACCAAAAGGTAGCCCAGGAGATCACC	13	+	20372754-20372803	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_2672850	006520064	S	1213	GCCGAGAAGATAAACATGAGTGCCCCTTCGGCCGCAGCAGTATAGAGCTG	13	+	20464970-20465019	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_2609025	004180403	S	123	TGGTCTCTTGCCAACCATGAATATTTTGCACTGCAGCACGCTGATAGTTC	13	+	20301009-20301058	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_2726261	006450021	S	1124	CCCTCCTGGGATGCTGGCTCTGGACAACATGCTGTATTTCGCTAAGCACC	13	+	20434272-20434321	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_2745055	005220554	S	1313	CTGCAACGACTTTCACCCGATGTTCTTCACCCATGACAGATCTTTTGAGG	13	+	20541349-20541398	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_1249680	001570239	S	328	GCCTCTCCCGGGATGTTACCTTTGCTCAGGAGTTCATAAACCTGGATGGC	13	+	20342955-20343004	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_1250472	002230097	S	726	TACACCATTGCTGTAATCAACGCACTTTTCCTCAAAGCTCCTGATGAGAG	13	+	20374803-20374852	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_1235672	006520136	S	958	CCCAAAGGGACATCATATTTGAACTTCGAAGAATTGCTTTCGATGCAGAG	13	+	20382232-20382281	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_1215781	000780088	S	1203	AGAACAGCAGCCGAGAAGATAAACATGAGTGCCCCTTCGGCCGCAGCAGT	13	+	20464960-20465009	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_210772	ILMN_210772	ELMO1	NM_080288.1	NM_080288.1		140580	17933765	NM_080288.1	Elmo1	NP_525027.1	ILMN_2672847	000070239	S	1207	CAGCAGCCGAGAAGATAAACATGAGTGCCCCTTCGGCCGCAGCAGTATAG	13	+	20464964-20465013	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_219394	ILMN_219394	KRTAP3-2	NM_025720.3	NM_025720.3		66708	145966860	NM_025720.3	Krtap3-2	NP_079996.2	ILMN_2708243	000630673	S	944	TGATATGGGATACGTTGTCGGTTTGTTATTAAATGTTCTCAATATTATAG				11qD	Mus musculus keratin associated protein 3-2 (Krtap3-2), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			KAP3.2; KRTAP3.2; 2310020D06Rik; 4733401L16Rik	KAP3.2; KRTAP3.2; 2310020D06Rik; 4733401L16Rik
Mus musculus	RefSeq	ILMN_211398	ILMN_211398	PRDX6-RS1	NM_177256.2	NM_177256.2		320769	31343183	NM_177256.2	Prdx6-rs1	NP_796230.1	ILMN_2797403	004040465	S	2640	CACTCATGCAGGAGAATGTGGGAACACAATGTGTTTGGCATCGAGACTTC	2	+	80095953-80096002	2qC3	Mus musculus peroxiredoxin 6, related sequence 1 (Prdx6-rs1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107184; Prdx5-rs1; Aop2-rs1; 4930414C22Rik	MGC107184; Prdx5-rs1; Aop2-rs1; 4930414C22Rik
Mus musculus	RefSeq	ILMN_194131	ILMN_194131	V1RB2	NM_011911.1	NM_011911.1		24112	6755950	NM_011911.1	V1rb2	NP_036041.1	ILMN_2503689	005080730	S	771	CTTCCAATCAAGGCTGAAGTTCAAGGATTGCTCAGTATTCTACTTTGTCC	6	-	90022192-90022241	6qD1	Mus musculus vomeronasal 1, receptor B2 (V1rb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]	VRi2; V1r5	VRi2; V1r5
Mus musculus	RefSeq	ILMN_240650	ILMN_240650	EG654453	NM_001039119.1	NM_001039119.1		654453	84993758	NM_001039119.1	EG654453	NP_001034208.1	ILMN_3161109	006180259	S	99	GGGTGGCATTTGCAAGTCTCAGAAAACTCACGGATGCTCTATCCTGCCTG	8|NT_166309.1	-	54797-54846		Mus musculus predicted gene, EG654453 (EG654453), mRNA.				Defb33	Defb33
Mus musculus	RefSeq	ILMN_211433	ILMN_211433	HNRNPA2B1	NM_182650.3	NM_182650.3		53379	109134360	NM_182650.3	Hnrnpa2b1	NP_872591.1	ILMN_1256921	005050270	S	1275	GGGAATGTTTTCTGATTTAAAACTTCATTTAGTACAGGTTCTTAATAAAA	6	-	51411253-51411302	6qB3	Mus musculus heterogeneous nuclear ribonucleoprotein A2/B1 (Hnrnpa2b1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hnrpa2; 9130414A06Rik; hnrnp-A	Hnrpa2; 9130414A06Rik; hnrnp-A
Mus musculus	RefSeq	ILMN_211433	ILMN_211433	HNRNPA2B1	NM_182650.3	NM_182650.3		53379	109134360	NM_182650.3	Hnrnpa2b1	NP_872591.1	ILMN_2615855	004220468	S	164	GTCTTTCTCATCTCGCTCGGCTGCGGGAAATCGGGCTGAAGCGACTGAGT	6	-	51419680-51419729	6qB3	Mus musculus heterogeneous nuclear ribonucleoprotein A2/B1 (Hnrnpa2b1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hnrpa2; 9130414A06Rik; hnrnp-A	Hnrpa2; 9130414A06Rik; hnrnp-A
Mus musculus	RefSeq	ILMN_213184	ILMN_213184	CTNND2	NM_008729.2	NM_008729.2		18163	112363089	NM_008729.2	Ctnnd2	NP_032755.2	ILMN_3018603	001030086	I	1795	GAAGACCGTGTCTATCAGAAGCCCCCTATGAGGAGTCTCAGCCAGAGCCA	15	+	30599262-30599311	15qB2	Mus musculus catenin (cadherin associated protein), delta 2 (Ctnnd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IDA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Catnd2; neurojugin; Nprap	Catnd2; neurojugin; Nprap
Mus musculus	RefSeq	ILMN_213184	ILMN_213184	CTNND2	NM_008729.2	NM_008729.2		18163	112363089	NM_008729.2	Ctnnd2	NP_032755.2	ILMN_3090378	000580259	A	5528	CACGCGATCACACATTCTTGGACGCCAACTCTTTTCTACAGGTCAATCCC	15	+	30958680-30958729	15qB2	Mus musculus catenin (cadherin associated protein), delta 2 (Ctnnd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IDA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Catnd2; neurojugin; Nprap	Catnd2; neurojugin; Nprap
Mus musculus	RefSeq	ILMN_213184	ILMN_213184	CTNND2	NM_008729.2	NM_008729.2		18163	112363089	NM_008729.2	Ctnnd2	NP_032755.2	ILMN_2652527	007400743	S	3536	CCTTACGGGATGCTGGTGGCATCGAGAAGTTGGTCGGCATCTCTAAAAGC	15	+	30896661-30896710	15qB2	Mus musculus catenin (cadherin associated protein), delta 2 (Ctnnd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IDA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Catnd2; neurojugin; Nprap	Catnd2; neurojugin; Nprap
Mus musculus	RefSeq	ILMN_213184	ILMN_213184	CTNND2	NM_008729.2	NM_008729.2		18163	112363089	NM_008729.2	Ctnnd2	NP_032755.2	ILMN_2634520	000150113	S	4752	GCAAGACGTCTCTTGCCTTTTGTTAATGCATTGTTGTAAAGTATTCGATG	15	+	30957904-30957953	15qB2	Mus musculus catenin (cadherin associated protein), delta 2 (Ctnnd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IDA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Catnd2; neurojugin; Nprap	Catnd2; neurojugin; Nprap
Mus musculus	RefSeq	ILMN_209857	ILMN_209857	DEFB11	NM_139221.1	NM_139221.1		246081	21361235	NM_139221.1	Defb11	NP_631967.1	ILMN_2599861	000630100	S	137	CGGTGCTACAAGTTCGGAGGGTTCTGTTACAATTCCATGTGTCCTCCTCA	8	-	23015977-23016026	8qA2	Mus musculus defensin beta 11 (Defb11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defb8	Defb8
Mus musculus	RefSeq	ILMN_200747	ILMN_200747	LOC381842	XM_355855.1	XM_355855.1			38085850	XM_355855.1	LOC381842		ILMN_1260272	000160564	S	50	TGGACACTGCGGGTGGAGCCCTGCCCCAGATCCTTCAGCTTACCTATGGA										
Mus musculus	RefSeq	ILMN_250108	ILMN_250108	E130016E03RIK	NM_001039556.2	NM_001039556.2		623474	118130991	NM_001039556.2	E130016E03Rik	NP_001034645.1	ILMN_3161959	000610039	S	2704	AGCTCCTGCCGTCTAATGAAGGACTGCTTCCTAACATGCCTTTGCTCCCC	4	+	11542786-11542801:11542802-11542835	4qA1	Mus musculus RIKEN cDNA E130016E03 gene (E130016E03Rik), mRNA.				Rad54b; Fsbp; MGC67261	Rad54b; Fsbp; MGC67261
Mus musculus	RefSeq	ILMN_214533	ILMN_214533	CDH17	NM_019753.3	NM_019753.3		12557	142374737	NM_019753.3	Cdh17	NP_062727.1	ILMN_2648968	006580593	S	2831	CCCATAACATTTTCCTCCTTTACAAAAGCCTTAGCTTCATAACTTGAACC	4	+	11744479-11744528	4qA1	Mus musculus cadherin 17 (Cdh17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Catalysis of the transfer of a oligopeptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement [goid 5427] [evidence IDA]	HPT-1/LI; HPT-1	HPT-1/LI; HPT-1
Mus musculus	RefSeq	ILMN_249951	ILMN_249951	OLFR204	NM_146992.1	NM_146992.1		258994	49227444	NM_146992.1	Olfr204	NP_667203.1	ILMN_3160401	001690326	S	544	CCACTCTATGCGATTTCTTGCACAGATCCATCTCTTAATGGATTGGTGGC	16	-	59314638-59314687	16qC1.3	Mus musculus olfactory receptor 204 (Olfr204), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR182-3	MOR182-3
Mus musculus	RefSeq	ILMN_211405	ILMN_226063	DMRTB1	XM_916034.3	XM_916034.3		56296	149252752	XM_916034.3	Dmrtb1	XP_921127.3	ILMN_1214473	005310020	S	491	AGCTTTGCTACCCGGATCAGCACCTGCCAGTGCGGCCCGTGCCAGTGCCA				4qC7	PREDICTED: Mus musculus DMRT-like family B with proline-rich C-terminal, 1 (Dmrtb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_219486	ILMN_219486	DEGS1	NM_007853.4	NM_007853.4		13244	145966905	NM_007853.4	Degs1	NP_031879.1	ILMN_2709470	003420538	S	1645	GCTTTCTGGAGGAGCTTTTGTTTAGTCCAACAGGAGTCCAAGGATGCAGA				1qH5	Mus musculus degenerative spermatocyte homolog 1 (Drosophila) (Degs1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor [goid 16705] [evidence IEA]	Mdes; Des1; Degs; AA536663	Mdes; Des1; Degs; AA536663
Mus musculus	RefSeq	ILMN_205801	ILMN_234312	IBTK	NM_001081282.1	NM_001081282.1		108837	124486856	NM_001081282.1	Ibtk	NP_001074751.1	ILMN_2575324	002900392	S	3257	GATTCCAGCAATGGAGAGAAGAGTCATTACACCGTATCAAGATGGGCCAG	9	-	85607276-85607325	9qE3.1	Mus musculus inhibitor of Bruton agammaglobulinemia tyrosine kinase (Ibtk), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence ISO]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]; Stops, prevents or reduces the activity of a protein tyrosine kinase [goid 30292] [evidence ISO]	BTKI; AA409502; mKIAA1417; 5430411K16Rik	BTKI; AA409502; mKIAA1417; 5430411K16Rik
Mus musculus	MEEBO	ILMN_184643	ILMN_184643	TES3-PS	scl0054339.1_91						Tes3-ps		ILMN_2420332	005570193	S	20	TTGAAGACTTTTCATGGCCGAGCGCTGTAATGGCACATCTGGGGGAAGAG										
Mus musculus	RefSeq	ILMN_213096	ILMN_213096	TAL1	NM_011527.1	NM_011527.1		21349	6755715	NM_011527.1	Tal1	NP_035657.1	ILMN_2839788	001580035	S	3841	GGATCCCAGTGGTACATGACCCTCTGCCGAAGGCTTGCCTCAGTCTGTGT	4	+	114569367-114569416	4qD1	Mus musculus T-cell acute lymphocytic leukemia 1 (Tal1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IPI]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IDA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	tal-1; Scl; SCL/tal-1	tal-1; Scl; SCL/tal-1
Mus musculus	Riken	ILMN_206777	ILMN_206777	E030002K04RIK	ri|E030002K04|PX00204M02|AK086813|1653					AK086813	E030002K04Rik		ILMN_2582629	006380477	S	1250	AGGGAACCCTTGCGTTTCCAACGACCAAGACTTAATGTGGGGTGTCCTTG										
Mus musculus	RefSeq	ILMN_237008	ILMN_237008	NFATC2	NM_001037178.1	NM_001037178.1		18019	81295411	NM_001037178.1	Nfatc2	NP_001032255.1	ILMN_3078602	002000725	I	36	GGAGCCTAGGCGCTGCAGCGTCTGCGCCGCTCCGCCAGATCACAGCACAC	2	-	168427070-168427119	2qH3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 (Nfatc2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISO]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	NFAT1-D; NFAT1; AI607462; Nfatp	NFAT1-D; NFAT1; AI607462; Nfatp
Mus musculus	RefSeq	ILMN_214299	ILMN_226975	2310003C23RIK	NM_029607.1	NM_029607.1		76425	58037442	NM_029607.1	2310003C23Rik	NP_083883.1	ILMN_1244393	005340338	S	1504	CATGATGGAAGACACCACCTCTGCCATGCCCTGTATCCCGAGAGCTGCAC	2	+	180452876-180452925	2qH4	Mus musculus RIKEN cDNA 2310003C23 gene (2310003C23Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			RP24-209P15.2	RP24-209P15.2
Mus musculus	RefSeq	ILMN_214299	ILMN_226975	2310003C23RIK	NM_029607.1	NM_029607.1		76425	58037442	NM_029607.1	2310003C23Rik	NP_083883.1	ILMN_2730729	005310440	S	810	GGAGTCTGGGATCGAACCAAGTGTGGACCTAGAAACACTTGATGAGCGAA	2	+	180449429-180449478	2qH4	Mus musculus RIKEN cDNA 2310003C23 gene (2310003C23Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			RP24-209P15.2	RP24-209P15.2
Mus musculus	RefSeq	ILMN_244951	ILMN_244951	OLFR469	NM_146426.1	NM_146426.1		258418	33239107	NM_146426.1	Olfr469	NP_666637.1	ILMN_2805042	004120138	S	725	CCACCTGCACTTCCCACCTCACTGCAGTCACTCTGTTCTATGGGACCATA	7	-	114966207-114966256	7qE3	Mus musculus olfactory receptor 469 (Olfr469), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-21	MOR204-21
Mus musculus	RefSeq	ILMN_244483	ILMN_244483	BTNL2	NM_079835.1	NM_079835.1		547431	83721944	NM_079835.1	Btnl2	NP_524574.1	ILMN_2779654	001450553	S	2204	CCAGTAGCACTAGAGGGACAAAGCAGGTGGGAGGAGAGGGTTTCTTTCCT	17	+	34500372-34500421	17qB1	Mus musculus butyrophilin-like 2 (Btnl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BTL-II; NG9; Gm315; Btl2	BTL-II; NG9; Gm315; Btl2
Mus musculus	Riken	ILMN_202636	ILMN_202636	9430003J03RIK	ri|9430003J03|PX00107L07|AK020400|897					AK020400	9430003J03Rik		ILMN_1258022	005080170	S	756	TCGTGCAGAGGTGTATAATGGTTCTCTCCTTCCACCTGTACGTGCGTCCC										
Mus musculus	RefSeq	ILMN_223940	ILMN_255288	SYT7	NM_018801.2	NM_018801.2		54525	118130738	NM_018801.2	Syt7	NP_061271.1	ILMN_2771851	003990661	S	945	GCGGGTAGAGAAAAAGAAGACCGTGACAAAGAAGAGGAACCTGAACCCCA	19	+	10518512-10518561	19qA	Mus musculus synaptotagmin VII (Syt7), transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	Riken	ILMN_201850	ILMN_201850	HIF1A	ri|5730564B02|PX00006L19|AK017853|1657					AK017853	Hif1a		ILMN_1242548	002360731	S	1286	GCTATGAGGAGACTGAGACAGGAGGAGGGTAATTTCCAAGTCAGAGGTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]; Any process that modulates the activity of an enzyme [goid 50790] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence ISO]; The chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 42541] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The chemical reactions and pathways involving lactate, the anion of lactic acid [goid 6089] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of epithelial cell migration [goid 10634] [evidence IMP]; The chemical reactions and pathways involving elastin, a glycoprotein which is randomly coiled and cross linked to form elastic fibres that are found in connective tissue [goid 51541] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle activity stimulus [goid 14850] [evidence IMP]; The series of events leading to growth of connective tissue when loss of tissues that are incapable of regeneration occurs, or when fibrinous exudate cannot be adequately cleared during or following an inflammatory response [goid 2248] [evidence IMP]; The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IGI]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 43619] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]		
Mus musculus	RefSeq	ILMN_209918	ILMN_209918	CCDC94	NM_028381.3	NM_028381.3		72886	148747196	NM_028381.3	Ccdc94	NP_082657.1	ILMN_2600426	007330037	S	973	GACAGCGAGGACAGCGACAGCTGAGTGTCAGTGATGCCCACCGTGGTCTC				17qD	Mus musculus coiled-coil domain containing 94 (Ccdc94), mRNA.				AI413813; 2900016D05Rik	AI413813; 2900016D05Rik
Mus musculus	RefSeq	ILMN_196338	ILMN_196338	AI931714	NM_178903.2	NM_178903.2			31343623	NM_178903.2	AI931714		ILMN_1257986	007000612	S	3484	TGGCATCCTGTAGGTCTAGGTTAGGGAGGATCACGAGCTGCCTGTGGATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IEA]	Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212123	ILMN_315266	LOC100042970	XM_001479207.1	XM_001479207.1		100042970	149268662	XM_001479207.1	LOC100042970	XP_001479257.1	ILMN_1226979	005290736	S	2228	TGGCCCTGAGCAATAAGGAGTCCCACGTGCCTTACCGAAACAGCAAGCTC	17	-	34018973-34019006:34019102-34019117	17qB1	PREDICTED: Mus musculus similar to Kifc1 protein (LOC100042970), mRNA.					
Mus musculus	RefSeq	ILMN_214573	ILMN_315266	LOC100042970	XM_001479207.1	XM_001479207.1		100042970	149268662	XM_001479207.1	LOC100042970	XP_001479257.1	ILMN_1257510	002450288	S	1097	TTCAGGAGCTTCAGGGAGAGCGGCTGCAATTGCAGGAGGAGCGGAGCACA	17	-	34021560-34021609	17qB1	PREDICTED: Mus musculus similar to Kifc1 protein (LOC100042970), mRNA.					
Mus musculus	Riken	ILMN_203236	ILMN_203236	C030048B12RIK	ri|C030048B12|PX00075G22|AK081292|1254					AK081292	C030048B12Rik		ILMN_2555760	003780424	S	821	TCACTGAAGAAGGAAGAGAGGCCTACAGCCGACAGTGCGCCCAGCTTGCC										
Mus musculus	MEEBO	ILMN_223864	ILMN_223864	GNL2	scl24979.20.1_9				21704087	NM_145552	Gnl2		ILMN_2770686	002190193	S	2141	CACGGCAGCAACAATCCAAAAAAGTTGGTGTGCGTTACTACGAGACACAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220362	ILMN_220362	G0S2	NM_008059.2	NM_008059.2		14373	142372632	NM_008059.2	G0s2	NP_032085.1	ILMN_1257299	000020327	S	406	TGCAGCCGGGCCCTGTCCCTCCGGCAGCACGCCTCTTAAGGCCGGTGACT	1	-	195098645-195098656:195098657-195098694	1qH6	Mus musculus G0/G1 switch gene 2 (G0s2), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		MGC151417; AI255151; AV006465; MGC151415	MGC151417; AI255151; AV006465; MGC151415
Mus musculus	Riken	ILMN_206106	ILMN_206106	1190008K20RIK	ri|1190008K20|ZA00011G03|AK028012|619					AK028012	1190008K20Rik		ILMN_2577598	007000689	S	369	TCTTGTTCAGAGTCAGTGTGTGCAGTTGGGCCGTGTGTCTGGGGGCAGGA										
Mus musculus	RefSeq	ILMN_196339	ILMN_196339	DYNLL2	NM_026556.3	NM_026556.3		68097	141802589	NM_026556.3	Dynll2	NP_080832.1	ILMN_2623402	006560364	S	2248	GGATTGAATGTTTGATTTTAGGTTTTATTTTTCTTATGAATGTCCAGATC	11	-	87793177-87793226	11qC	Mus musculus dynein light chain LC8-type 2 (Dynll2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence NAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700064A15Rik; 6720463E02Rik; C87222; RP23-449F16.9; Dlc2	1700064A15Rik; 6720463E02Rik; C87222; RP23-449F16.9; Dlc2
Mus musculus	RefSeq	ILMN_196339	ILMN_196339	DYNLL2	NM_026556.3	NM_026556.3		68097	141802589	NM_026556.3	Dynll2	NP_080832.1	ILMN_2609052	007610356	S	1284	CTGCTTAGCCCTCGTTTTTTCTCATTCCTTCGTTCTCTTAGAGCAGCCCC	11	-	87794141-87794190	11qC	Mus musculus dynein light chain LC8-type 2 (Dynll2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence NAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700064A15Rik; 6720463E02Rik; C87222; RP23-449F16.9; Dlc2	1700064A15Rik; 6720463E02Rik; C87222; RP23-449F16.9; Dlc2
Mus musculus	RefSeq	ILMN_209317	ILMN_209317	CORT	NM_007745.3	NM_007745.3		12854	142376224	NM_007745.3	Cort	NP_031771.1	ILMN_1226607	006840050	S	380	GCCCTGCAAGAACTTCTTCTGGAAAACCTTCTCCTCGTGCAAGTAACCCC	4	-	148499368-148499372:148499373-148499417	4qE2	Mus musculus cortistatin (Cort), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	CST; PCST	CST; PCST
Mus musculus	RefSeq	ILMN_238708	ILMN_238708	BC022651	NM_177887.2	NM_177887.2		330460	31342748	NM_177887.2	BC022651	NP_808555.1	ILMN_2862148	006860632	S	2630	CGCTAGGGAGGACTGCAAGACATGCTGGGAATTGTAGTTCAATCAGCCCC	7	-	4310063-4310112	7qA1	Mus musculus cDNA sequence BC022651 (BC022651), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC31268; A630041N19	MGC31268; A630041N19
Mus musculus	RefSeq	ILMN_222011	ILMN_222011	1110031I02RIK	NM_025402.1	NM_025402.1		66179	13384785	NM_025402.1	1110031I02Rik	NP_079678.1	ILMN_2960474	001400189	S	1057	TACCATGTCCTGTCAGAGAAGGCACTCCTAGGCCGGGTGGAGGGTGTGTT	11	-	120993819-120993868	11qE2	Mus musculus RIKEN cDNA 1110031I02 gene (1110031I02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196294	ILMN_235870	LMBR1	NM_020295.3	NM_020295.3		56873	126507092	NM_020295.3	Lmbr1	NP_064691.2	ILMN_1216178	002360484	S	1403	CTGTGATGTCCAGAACACTGGGAATCACTAGATTCGATCTACTTGGAGAC	5	-	29561650-29561679:29579283-29579302	5qB1	Mus musculus limb region 1 (Lmbr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	1110048D14Rik; AU017641	1110048D14Rik; AU017641
Mus musculus	RefSeq	ILMN_196294	ILMN_235870	LMBR1	NM_020295.3	NM_020295.3		56873	126507092	NM_020295.3	Lmbr1	NP_064691.2	ILMN_2523421	007550523	S	2560	TTAGTTGTTTAGTTTAATTGTTGGAATGGTTTCTCAACTCCTGAGTCTAC	5	-	29558664-29558713	5qB1	Mus musculus limb region 1 (Lmbr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	1110048D14Rik; AU017641	1110048D14Rik; AU017641
Mus musculus	RefSeq	ILMN_195996	ILMN_242694	4930597O21RIK	XM_989547.2	XM_989547.2		75373	149255182	XM_989547.2	4930597O21Rik	XP_994641.2	ILMN_2520672	004540132	S	1475	ATTATTCATTTTTTATTTCTTTTCTGTACTAAAATGTCAGCCTGCAACAA	6	-	66844747-66844796	6qC1	PREDICTED: Mus musculus RIKEN cDNA 4930597O21 gene (4930597O21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197160	ILMN_197160	LOC218060	XM_138460.2	XM_138460.2			38074371	XM_138460.2	LOC218060		ILMN_1234922	001510711	S	382	TCAAAGCTCCAGCTAAGGCCCAGGCCCAGGCTCCCAAAGATGCCCTGGCC										
Mus musculus	Riken	ILMN_205822	ILMN_205822	A530052I19RIK	ri|A530052I19|PX00141B02|AK040969|2557					AK040969	A530052I19Rik		ILMN_1243997	003400112	S	2250	GTAGCTGCCATAACGCCTAGGGGAGGAGTGAGAAGACTCTAGCAAGGGCC										
Mus musculus	MEEBO	ILMN_196193	ILMN_196193	3010031K01RIK	scl33899.1.1_293						3010031K01Rik		ILMN_2522460	002490274	S	7	GAGTGCCCGTGAGTGAGTGAGTGCTCTCAAGGTAGCTTCTGGCAGTACAG										
Mus musculus	RefSeq	ILMN_227745	ILMN_227745	1700109H08RIK	NM_029843.1	NM_029843.1		77036	124249217	NM_029843.1	1700109H08Rik	NP_084119.1	ILMN_3005587	002760239	S	138	GCTTGGTGGGATGCCCTGTTGGAAAGATGGATAATACCGGGCTGGACTGC				5qA1	Mus musculus RIKEN cDNA 1700109H08 gene (1700109H08Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC118394	MGC118394
Mus musculus	RefSeq	ILMN_219474	ILMN_219474	OLFR620	NM_146812.1	NM_146812.1		258808	22129422	NM_146812.1	Olfr620	NP_667023.1	ILMN_1231655	002630431	S	567	GGCCTGTGGAGATATCCGCTTCAATAGCATCTATGGTCTAGCTCTGGTGA	7	-	110760249-110760298	7qE3	Mus musculus olfactory receptor 620 (Olfr620), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC123655; MGC123656; MOR4-1	MGC123655; MGC123656; MOR4-1
Mus musculus	Riken	ILMN_204534	ILMN_204534	B230353O14RIK	ri|B230353O14|PX00161G17|AK046219|3325					AK046219	B230353O14Rik		ILMN_1237715	002070390	S	2877	GGACTGAGTTGTGGGACAGCCATGTCTTCTGCCTTGGCTAGTTGAACCTC										
Mus musculus	MEEBO	ILMN_224110	ILMN_224110	STK22B	scl022115.1_229				6678166	NM_009436	Stk22b		ILMN_2774950	001400433	S	1146	CACATAAGCTAAGTAGGCAGGTAGGAGCTGAAGAAGGCACAGGTGCAAGG										
Mus musculus	RefSeq	ILMN_190096	ILMN_232602	GABBR1	NM_019439.3	NM_019439.3		54393	131888528	NM_019439.3	Gabbr1	NP_062312.3	ILMN_2680745	000060754	S	2039	CCCCAGCCGACCAGACCTTGGTCATCAAGACATTCCGTTTCCTGTCACAG	17	+	37204168-37204217	17qB1	Mus musculus gamma-aminobutyric acid (GABA-B) receptor, 1 (Gabbr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-B receptors are G-protein coupled receptors [goid 4965] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	bM573K1.1; GABAbR1	bM573K1.1; GABAbR1
Mus musculus	RefSeq	ILMN_221920	ILMN_221920	NUPR1	NM_019738.1	NM_019738.1		56312	9790144	NM_019738.1	Nupr1	NP_062712.1	ILMN_2742042	001240424	S	345	CCAGCAATGGATACAGGACATCACACCCAGCAATGGATACAGGACCTTGG	7	-	133766991-133767040	7qF3	Mus musculus nuclear protein 1 (Nupr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; Inflammation which comprises a rapid, short-lived, relatively uniform response to acute injury or antigenic challenge and is characterized by accumulations of fluid, plasma proteins, and granulocytic leukocytes. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response [goid 2526] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p8; 2310032H04Rik; Com1	p8; 2310032H04Rik; Com1
Mus musculus	RefSeq	ILMN_186833	ILMN_250505	SAMD12	NM_177225.4	NM_177225.4		320679	146198577	NM_177225.4	Samd12	NP_796199.1	ILMN_1238317	001230402	S	555	GCAAGCTGGTGTCCTGTTCCATATGAGCATGGCCTGATCCCCAGAGAAAC				15qC-qD1	Mus musculus sterile alpha motif domain containing 12 (Samd12), mRNA.				A830094I09Rik	A830094I09Rik
Mus musculus	MEEBO	ILMN_221493	ILMN_221493	2410080I02RIK	scl53275.2.1_201				51771472	XM_484787	2410080I02Rik		ILMN_2736351	006760092	S	792	GAAGCTGATGTCATCGCGACACCCTACTCTGCAGTCTTCCCAGAGGGACC										
Mus musculus	MEEBO	ILMN_217758	ILMN_217758	5730559C18RIK	scl067313.2_26	XM_148965.1			20910402	XM_148965.1	5730559C18Rik		ILMN_2687181	003290673	S	147	GTGTTAGGAGTCTGCCTCCTGGGAGGGAGAGCTTCGGGCGGGCCTCAGGA										
Mus musculus	RefSeq	ILMN_199676	ILMN_199676	LOC382866	XM_356718.1	XM_356718.1			38075954	XM_356718.1	LOC382866		ILMN_1219370	002850707	S	396	GAGCTCTGTTCTCACTGGTGAAGGGCCCGGGGAACACACTTCTGGCAGCT										
Mus musculus	MEEBO	ILMN_219868	ILMN_219868	4930478A21RIK	scl47508.3.1_182	NM_183109.1			34147092	NM_183109.1	4930478A21Rik		ILMN_2714612	001110463	S	748	TGTCCTTGTGTGCATCGAGCTACTAATTGATTAGTTGACTGTTGAAGGAT										
Mus musculus	RefSeq	ILMN_212207	ILMN_212207	PIP4K2B	NM_054051.1	NM_054051.1		108083	33563293	NM_054051.1	Pip4k2b	NP_473392.1	ILMN_1231996	002120086	S	4840	GGGCCCGCAGGATTAAAGTTCTACCCACCACATGTGACTTGTCCATTTCC	11	-	97576634-97576683	11qD	Mus musculus phosphatidylinositol-5-phosphate 4-kinase, type II, beta (Pip4k2b), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 5-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16309] [evidence IEA]	PI5P4Kbeta; AI848124; c11	PI5P4Kbeta; AI848124; c11
Mus musculus	RefSeq	ILMN_212207	ILMN_212207	PIP4K2B	NM_054051.1	NM_054051.1		108083	33563293	NM_054051.1	Pip4k2b	NP_473392.1	ILMN_2623967	002940762	S	2817	AAGCTGGTTTGTGAAGCTGTCGTGGGTGAATAGATGATTCCCAACGCCTG	11	-	97578657-97578706	11qD	Mus musculus phosphatidylinositol-5-phosphate 4-kinase, type II, beta (Pip4k2b), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 5-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16309] [evidence IEA]	PI5P4Kbeta; AI848124; c11	PI5P4Kbeta; AI848124; c11
Mus musculus	RefSeq	ILMN_217416	ILMN_217416	NT5DC3	NM_153595.2	NM_153595.2		103220	51491877	NM_153595.2	Nt5dc3	NP_705823.2	ILMN_3117650	004900482	A	1117	ACCCCGGAGTGCTGATGATCCCATACTTTGTGGGCAGTACGTGTGAGAGC	10	+	86187050-86187099	10qC1	Mus musculus 5'-nucleotidase domain containing 3 (Nt5dc3), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Gnn; MGC40847	Gnn; MGC40847
Mus musculus	RefSeq	ILMN_215494	ILMN_215494	NCLN	NM_134009.1	NM_134009.1		103425	33469042	NM_134009.1	Ncln	NP_598770.1	ILMN_2833539	001090193	S	2904	ACTATTGTGCTGCTGTCCTTGGTCTCTGGCGGTGTCACATCAGGCCCGGC	10	-	80889506-80889555	10qC1	Mus musculus nicalin homolog (zebrafish) (Ncln), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			3100002P13Rik; AW120537	3100002P13Rik; AW120537
Mus musculus	Riken	ILMN_205029	ILMN_205029	A430075F05RIK	ri|A430075F05|PX00138G03|AK040185|2603					AK040185	A430075F05Rik		ILMN_1246084	006960400	S	2299	CTACACTCATGGTCACTGACAGCTTCCTGCTCATGATGCTCAGGCACGCG										
Mus musculus	RefSeq	ILMN_221799	ILMN_221799	SLC12A5	NM_020333.1	NM_020333.1		57138	33859679	NM_020333.1	Slc12a5	NP_065066.1	ILMN_1224363	007380327	S	5605	ATGCTTTAAGGCTTTTACTGTGTTAATTTTTTAGATACCTGTCTGCACAC	2	+	164825144-164825193	2qH3	Mus musculus solute carrier family 12, member 5 (Slc12a5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Cl-(out) = K+(in) + Cl-(in) [goid 15379] [evidence IMP]	KCC2; mKIAA1176	KCC2; mKIAA1176
Mus musculus	RefSeq	ILMN_224572	ILMN_224572	S100A11	NM_016740.3	NM_016740.3		20195	113930755	NM_016740.3	S100a11	NP_058020.1	ILMN_2883392	005720523	S	220	CCTGGTGTCCTTGACCGCATGATGAAGAAGCTGGACCTCAACTGTGACGG	3	+	93329926-93329975	3qF2.1	Mus musculus S100 calcium binding protein A11 (calgizzarin) (S100a11), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Emap1; S100a14; MGC107585; EMAPI; cal; S100c	Emap1; S100a14; MGC107585; EMAPI; cal; S100c
Mus musculus	RefSeq	ILMN_198842	ILMN_198842	LOC210156	XM_145452.2	XM_145452.2			38088987	XM_145452.2	LOC210156		ILMN_1243636	002030136	S	1562	CGAGAGCAAAAGAGTAGTACAGAAAGCCCTCAGTTGCTGGAGGTCCTCAC										
Mus musculus	RefSeq	ILMN_212675	ILMN_212675	ELOVL7	NM_029001.2	NM_029001.2		74559	31542037	NM_029001.2	Elovl7	NP_083277.2	ILMN_1258106	007650441	S	2948	GGAGCAGAGTGAGTGTCACTGGTTGTAGGGTTTGTGTAAGCAGTATTCGG	13	+	109405392-109405441	13qD2.1	Mus musculus ELOVL family member 7, elongation of long chain fatty acids (yeast) (Elovl7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]		9130013K24Rik; AI840082	9130013K24Rik; AI840082
Mus musculus	RefSeq	ILMN_208893	ILMN_208893	WNK1	NM_198703.1	NM_198703.1		232341	38424076	NM_198703.1	Wnk1	NP_941992.1	ILMN_2655005	000460193	S	2656	CCCATATCGACTCCTCATGTGTCCACGGCGCAGACAGGTTTCTCATCCGT	6	-	119904041-119904090	6qF1	Mus musculus WNK lysine deficient protein kinase 1 (Wnk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized [goid 42598] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 50794] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Prkwnk1; mKIAA0344; 6430573H23Rik	Prkwnk1; mKIAA0344; 6430573H23Rik
Mus musculus	RefSeq	ILMN_208893	ILMN_208893	WNK1	NM_198703.1	NM_198703.1		232341	38424076	NM_198703.1	Wnk1	NP_941992.1	ILMN_1241638	004060543	S	9227	ACAGGATGACTGAGTGCTTCATACCAGCAGTAGAGGGAGCCAAATGCAGC	6	-	119874392-119874441	6qF1	Mus musculus WNK lysine deficient protein kinase 1 (Wnk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized [goid 42598] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 50794] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Prkwnk1; mKIAA0344; 6430573H23Rik	Prkwnk1; mKIAA0344; 6430573H23Rik
Mus musculus	RefSeq	ILMN_208893	ILMN_208893	WNK1	NM_198703.1	NM_198703.1		232341	38424076	NM_198703.1	Wnk1	NP_941992.1	ILMN_1258991	002570731	S	112	ATCCGAGCCCGCATTCTTCACTCCATCGGACCGACCATGTCTGACGGTGC	6	-	119987636-119987650:119987651-119987685	6qF1	Mus musculus WNK lysine deficient protein kinase 1 (Wnk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized [goid 42598] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 50794] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Prkwnk1; mKIAA0344; 6430573H23Rik	Prkwnk1; mKIAA0344; 6430573H23Rik
Mus musculus	RefSeq	ILMN_214673	ILMN_214673	ITGB1BP2	NM_013712.2	NM_013712.2		26549	114842407	NM_013712.2	Itgb1bp2	NP_038740.1	ILMN_2853166	006220551	S	973	GCTGGAGCACCCTGATTCACTAGCTGAGAAGGCTAGGGCAGGGGTTTTAC	X	+	98648560-98648609	XqD	Mus musculus integrin beta 1 binding protein 2 (Itgb1bp2), mRNA.	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]	Chordc3	Chordc3
Mus musculus	RefSeq	ILMN_225075	ILMN_225075	B020004J07RIK	NM_001033790.1	NM_001033790.1		545662	85702110	NM_001033790.1	B020004J07Rik	NP_001028962.1	ILMN_2921497	001450161	S	1522	GACGCTGTGTCTATGACTTGAACACCACCAGACTTTGCCATTGTTGGGAG	4	-	101333304-101333353	4qC6	Mus musculus RIKEN cDNA B020004J07 gene (B020004J07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196944	ILMN_196944	LOC208256	XM_136795.3	XM_136795.3			38050362	XM_136795.3	LOC208256		ILMN_2526341	005490398	S	1349	TGCCCCCTGCTGGCTGGAGCAGTGCGAGATGGAGGTTCATAGGTCACCAA										
Mus musculus	Riken	ILMN_207216	ILMN_207216	D530024B08RIK	ri|D530024B08|PX00673A02|AK085221|1797					AK085221	D530024B08Rik		ILMN_1229867	002000035	S	1434	GGAGTAAGCCCCAGCTTCCAGACACAAGCATATAGGTCAACACTTCCATG										
Mus musculus	RefSeq	ILMN_216694	ILMN_216694	LEPRE1	NM_019782.2	NM_019782.2		56401	109150436	NM_019782.2	Lepre1	NP_062756.2	ILMN_1258906	001030474	S	1689	GCGCGTCATGGAGTCCTACTTCCGCCTGGACACGCCCCTCTATTTCTCTT	4	+	118917630-118917679	4qD2.1	Mus musculus leprecan 1 (Lepre1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-3-hydroxy-L-proline + succinate + CO2 [goid 19797] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gros1; 2410024C15Rik	Gros1; 2410024C15Rik
Mus musculus	RefSeq	ILMN_216694	ILMN_216694	LEPRE1	NM_019782.2	NM_019782.2		56401	109150436	NM_019782.2	Lepre1	NP_062756.2	ILMN_2738468	006560181	S	2134	AAGATGCTGTTCAGCCCAGAAGAGGTGGACCTCCCCCAGGAACAGCCCCT	4	+	118920523-118920572	4qD2.1	Mus musculus leprecan 1 (Lepre1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-3-hydroxy-L-proline + succinate + CO2 [goid 19797] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gros1; 2410024C15Rik	Gros1; 2410024C15Rik
Mus musculus	Riken	ILMN_207204	ILMN_207204	C030044F15RIK	ri|C030044F15|PX00665N24|AK081280|2342					AK081280	C030044F15Rik		ILMN_2585829	004480537	S	2226	TGTGTGTGTTGGGATGTGGGAAGATGACTTCCTTAAGGTAACTGAAAAGG										
Mus musculus	RefSeq	ILMN_196694	ILMN_196694	C030015H18	XM_205762.3	XM_205762.3			38091939	XM_205762.3	C030015H18		ILMN_1224958	007210431	S	2153	GCATCACTGGAGATGTACTTTCAGAGATAAATGGACTTTGGATGTACGAG										
Mus musculus	RefSeq	ILMN_214367	ILMN_214367	CMTM4	NM_153582.4	NM_153582.4		97487	118130093	NM_153582.4	Cmtm4	NP_705810.2	ILMN_1244409	005420286	S	957	CACGGTGTCACCTGACTCTGAGCCACCCTGTCATGTGTATTTGTGATGAG	8	-	106878707-106878756	8qD3	Mus musculus CKLF-like MARVEL transmembrane domain containing 4 (Cmtm4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	D19397; MGC30490; Cklfsf4	D19397; MGC30490; Cklfsf4
Mus musculus	RefSeq	ILMN_214367	ILMN_214367	CMTM4	NM_153582.4	NM_153582.4		97487	118130093	NM_153582.4	Cmtm4	NP_705810.2	ILMN_2759114	006220747	S	897	GCCCGTGGGAGCAGCCGACTTTAATGACTGCTCTAGGTCTTAACTGTCCG	8	-	106878767-106878816	8qD3	Mus musculus CKLF-like MARVEL transmembrane domain containing 4 (Cmtm4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	D19397; MGC30490; Cklfsf4	D19397; MGC30490; Cklfsf4
Mus musculus	MEEBO	ILMN_190176	ILMN_190176	6330532G10RIK	scl7041.1.1_265						6330532G10Rik		ILMN_2467843	003130477	S	19	TGTTTTATAGTCGTTTCATAAGTCTGTTGCTCTCTATGAGTATGCTCTCT										
Mus musculus	RefSeq	ILMN_260912	ILMN_260912	POLR1A	NM_009088.2	NM_009088.2		20019	34328145	NM_009088.2	Polr1a	NP_033114.2	ILMN_2836664	006650239	S	5803	TCTGGGACCACAGCAGCTCCCTACCCCACAGCCTAAAGTTTCCTACTGGG	6	+	71929068-71929117	6qC1	Mus musculus polymerase (RNA) I polypeptide A (Polr1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5736] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RPA194; 194kDa; 3010014K16Rik; mRPA1	RPA194; 194kDa; 3010014K16Rik; mRPA1
Mus musculus	RefSeq	ILMN_211846	ILMN_260912	POLR1A	NM_009088.2	NM_009088.2		20019	34328145	NM_009088.2	Polr1a	NP_033114.2	ILMN_2620069	000270274	S	4074	CCTGCCACATGCATATTACCAGCAGGAGAAGTGCCTGAGACCCGAGGACA	6	+	71917939-71917988	6qC1	Mus musculus polymerase (RNA) I polypeptide A (Polr1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5736] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RPA194; 194kDa; 3010014K16Rik; mRPA1	RPA194; 194kDa; 3010014K16Rik; mRPA1
Mus musculus	RefSeq	ILMN_211846	ILMN_260912	POLR1A	NM_009088.2	NM_009088.2		20019	34328145	NM_009088.2	Polr1a	NP_033114.2	ILMN_2700107	006380370	S	6006	GCCAGACCGTTTCTATTTTTGTCCACTGTTATTCCAGCGTGGGCTGAGTA	6	+	71929271-71929320	6qC1	Mus musculus polymerase (RNA) I polypeptide A (Polr1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5736] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RPA194; 194kDa; 3010014K16Rik; mRPA1	RPA194; 194kDa; 3010014K16Rik; mRPA1
Mus musculus	RefSeq	ILMN_196056	ILMN_234845	1700013G10RIK	XM_889570.2	XM_889570.2		75507	94395324	XM_889570.2	1700013G10Rik	XP_894663.1	ILMN_1225084	004070497	S	1201	CCCCGGTGTTGGCATTGCAATATCTTTATGGCTATAATGTTTTGTTTCTC	13	+	78165363-78165412	13qC1	PREDICTED: Mus musculus RIKEN cDNA 1700013G10 gene (1700013G10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196424	ILMN_234845	1700013G10RIK	XM_889570.2	XM_889570.2		75507	94395324	XM_889570.2	1700013G10Rik	XP_894663.1	ILMN_2524120	000520253	S	729	CTATATTGCTGGGCGCCTCCGGCTGCAGAAAGACCTGGTCCAAGTGTGGT	13	+	78164891-78164940	13qC1	PREDICTED: Mus musculus RIKEN cDNA 1700013G10 gene (1700013G10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_193215	ILMN_317743	LOC100048479	XM_001480325.1	XM_001480325.1		100048479	149259716	XM_001480325.1	LOC100048479	XP_001480375.1	ILMN_2734905	003940086	S	240	CCAACGTCGAACTCTACATGCAATATTCAAGGAAAATAAGCGTCCGTCCA					PREDICTED: Mus musculus similar to hepatocyte nuclear factor 6 beta (LOC100048479), mRNA.					
Mus musculus	RefSeq	ILMN_218071	ILMN_218071	UIMC1	NM_011307.1	NM_011307.1		20184	45597444	NM_011307.1	Uimc1	NP_035437.1	ILMN_2691177	001440520	S	498	TCTCGACCTCTGGCTGCTGAACTATCTTCACATTCCCATCAAGAGAACAC	13	-	55085946-55085995	13qB1	Mus musculus ubiquitin interaction motif containing 1 (Uimc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Rxrip110; RIP110; 9430016E08Rik; D630032M02Rik; D330018D10Rik	Rxrip110; RIP110; 9430016E08Rik; D630032M02Rik; D330018D10Rik
Mus musculus	RefSeq	ILMN_218071	ILMN_218071	UIMC1	NM_011307.1	NM_011307.1		20184	45597444	NM_011307.1	Uimc1	NP_035437.1	ILMN_2821420	004480037	S	2805	CAGCTAAGACCTGTGGCTATATAGAAGGAGGAGTGCCGTTCTTCCCCTGG	13	-	55037578-55037627	13qB1	Mus musculus ubiquitin interaction motif containing 1 (Uimc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Rxrip110; RIP110; 9430016E08Rik; D630032M02Rik; D330018D10Rik	Rxrip110; RIP110; 9430016E08Rik; D630032M02Rik; D330018D10Rik
Mus musculus	RefSeq	ILMN_216203	ILMN_249747	WDR62	XM_891376.2	XM_891376.2		233064	94380132	XM_891376.2	Wdr62	XP_896469.1	ILMN_1241754	004260035	S	4527	CAGACACTGCCTAGCCCAGACCCTCTGTCCCTACCTACACTTTGTCCCCT	7	-	31025324-31025373	7qB1	PREDICTED: Mus musculus WD repeat domain 62, transcript variant 2 (Wdr62), mRNA.					
Mus musculus	Riken	ILMN_201624	ILMN_201624	MRPL15	ri|1110003K01|R000013G06|AK003367|1004					AK003367	Mrpl15		ILMN_1252743	002490075	S	4	TTCCTGGGCGCCCTTGAAGCACCGCGGGTCATGGCTGGCACGGCGCGCGG						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]; The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome [goid 2] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]		
Mus musculus	MEEBO	ILMN_220292	ILMN_220292	E130114P18RIK	scl0319865.1_73	NM_177023.2			31342618	NM_177023.2	E130114P18Rik		ILMN_2720218	004280184	S	920	GTGGGACAAGAAGAGTTTGAGCAGTTTGAGAGTTGTGGCAACTTGGGAGA										
Mus musculus	MEEBO	ILMN_220292	ILMN_220292	E130114P18RIK	scl0319865.1_73	NM_177023.2			31342618	NM_177023.2	E130114P18Rik		ILMN_2735393	001400162	S	1122	GTGGGTGCTCTTAGAGTTGATGTATAAAAATAAACATTGAACACTTGGAC										
Mus musculus	RefSeq	ILMN_244367	ILMN_244367	SHROOM3	NM_001077596.1	NM_001077596.1		27428	117606380	NM_001077596.1	Shroom3	NP_001071064.1	ILMN_3085841	002370471	A	5935	GGGTTACTGGGGGCTTCCTGAGTAACAGGAAGAGGCTTTCCAGGAATCTC	5	+	93393839-93393888	5qE2	Mus musculus shroom family member 3 (Shroom3), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell over time, from its formation to the mature structure. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube [goid 2066] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	D5Ertd287e; Shrm; AL022960	D5Ertd287e; Shrm; AL022960
Mus musculus	Riken	ILMN_204821	ILMN_204821	C630001F15RIK	ri|C630001F15|PX00083H23|AK049812|2863					AK049812	C630001F15Rik		ILMN_2567872	005490615	S	2581	GGACAATAGCCTCAGGGGCTGACCCTTGACCTGCTATGTTTTTGAGGCTG										
Mus musculus	RefSeq	ILMN_250769	ILMN_250769	GRAP2	NM_010815.2	NM_010815.2		17444	118130168	NM_010815.2	Grap2	NP_034945.1	ILMN_3113787	005220653	A	473	GGGCAAGGACATTGGATTCTTCATCATCAGGGCCAGCCAGAGTTCCCCAG	15	+	80468923-80468972	15qE1	Mus musculus GRB2-related adaptor protein 2 (Grap2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gads; GRB2L; GrpL; Grf40; GRID; GrbX; GRAP-2; Mona; P38	Gads; GRB2L; GrpL; Grf40; GRID; GrbX; GRAP-2; Mona; P38
Mus musculus	RefSeq	ILMN_222702	ILMN_222702	GNAZ	NM_010311.3	NM_010311.3		14687	118129988	NM_010311.3	Gnaz	NP_034441.1	ILMN_3161289	005960044	S	2299	TGGAGCCGCACCCGACTCAGCCACTCTGCGTCACATTCGTCCTGTACCTA	10	+	74454334-74454383	10qB5.3	Mus musculus guanine nucleotide binding protein, alpha z subunit (Gnaz), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	Gz; AI847979	Gz; AI847979
Mus musculus	RefSeq	ILMN_193709	ILMN_193709	TTF1	NM_009442.2	NM_009442.2		22130	111154069	NM_009442.2	Ttf1	NP_033468.2	ILMN_2499681	002140593	S	2918	GTAAGAAGAAGTATTCCATGAGATCTGTGCACTATGGAGATAGGTGGGGG	2	+	28941935-28941984	2qA3	Mus musculus transcription termination factor, RNA polymerase I (Ttf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA];  [goid 6361] [evidence IDA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Any activity that brings about termination of transcription by RNA polymerase I [goid 3716] [evidence IDA]		
Mus musculus	MEEBO	ILMN_184416	ILMN_184416	2610528O22RIK	scl37411.36_206				23510256	NM_153395	2610528O22Rik		ILMN_2710773	003710687	S	5407	GAGGGACAGTGAGCACTGCTTCACACCTGCTACCATGTCTTCAGTTGGTG										
Mus musculus	MEEBO	ILMN_184416	ILMN_184416	2610528O22RIK	scl37411.36_206				23510256	NM_153395	2610528O22Rik		ILMN_2418461	004250719	S	10	TTCAAGTACAGAATCATACTAAAATTTTATGCAAGGTGGTACTATAACAT										
Mus musculus	RefSeq	ILMN_210699	ILMN_210699	HSD3B6	NM_013821.2	NM_013821.2		15497	31980731	NM_013821.2	Hsd3b6	NP_038849.1	ILMN_2608277	000670372	S	915	CACAATAATTACGGCCCTCAAAAATAAGAATATTCTCGGTTGTACGGGCA	3	-	98610258-98610307	3qF2.2	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6 (Hsd3b6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid [goid 4769] [evidence IEA]	D19210	D19210
Mus musculus	RefSeq	ILMN_203103	ILMN_322239	SFRS11	NM_001093753.1	NM_001093753.1		69207	147898670	NM_001093753.1	Sfrs11	NP_001087222.1	ILMN_1222584	002490102	S	362	TCAGCAGTTGTGGCACAGCATCTGACAAACACTGTGTTCGTTGACAGAGC				3qH4	Mus musculus splicing factor, arginine/serine-rich 11 (Sfrs11), transcript variant 1, mRNA.				2610019N13Rik; 0610009J05Rik	2610019N13Rik; 0610009J05Rik
Mus musculus	RefSeq	ILMN_201682	ILMN_322239	SFRS11	NM_001093753.1	NM_001093753.1		69207	147898670	NM_001093753.1	Sfrs11	NP_001087222.1	ILMN_1259905	005960373	S	363	CAGCAGTTGTGGCACAGCATCTGACAAACACTGTGTTCGTTGACAGAGCT				3qH4	Mus musculus splicing factor, arginine/serine-rich 11 (Sfrs11), transcript variant 1, mRNA.				2610019N13Rik; 0610009J05Rik	2610019N13Rik; 0610009J05Rik
Mus musculus	RefSeq	ILMN_218726	ILMN_218726	PLA2G12B	NM_023530.2	NM_023530.2		69836	31980795	NM_023530.2	Pla2g12b	NP_076019.2	ILMN_2699466	000650376	S	720	CAGAGACAGCTGTGTGACAAGAGAGCCGTCCTTTCTTCAAACCCTTCGGA	10	+	58884378-58884427	10qB4	Mus musculus phospholipase A2, group XIIB (Pla2g12b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]	2010002E04Rik; Fksg71; Pla2g13	2010002E04Rik; Fksg71; Pla2g13
Mus musculus	RefSeq	ILMN_221459	ILMN_221459	B3GALT5	NM_033149.2	NM_033149.2		93961	40254130	NM_033149.2	B3galt5	NP_149161.1	ILMN_1245509	006550324	S	4607	GGGGAGCCCAGACGCTGCTTACATTCTGCTTCAGGGAAATATCAGAGGAG	16	+	96541158-96541207	16qC4	Mus musculus UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 (B3galt5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]	b3Galt-V; 1190002B21Rik; AU045265	b3Galt-V; 1190002B21Rik; AU045265
Mus musculus	RefSeq	ILMN_196361	ILMN_196361	TSPYL3	NM_198617.1	NM_198617.1		241732	38348483	NM_198617.1	Tspyl3	NP_941019.1	ILMN_2965132	001090605	S	2846	CCCCTAGAGGTAACCCTGAAATGGATGGTCTTGATGCTTCTGACCTCCTG	2	-	153048224-153048273	2qH1	Mus musculus TSPY-like 3 (Tspyl3), mRNA.				MGC58351; Gm36; AW212607	MGC58351; Gm36; AW212607
Mus musculus	RefSeq	ILMN_220469	ILMN_220469	CCNF	NM_007634.2	NM_007634.2		12449	31560723	NM_007634.2	Ccnf	NP_031660.2	ILMN_2722438	004890292	S	3588	CACCCTGCCGAGGCATTTTGGTTGTTGTCCTACACCTCTGAGTGTTAACC	17	-	23950231-23950280	17qA3.3	Mus musculus cyclin F (Ccnf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The resumption of the mitotic cell division cycle by cells that were in a quiescent or other non-dividing state [goid 320] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]		CycF	CycF
Mus musculus	MEEBO	ILMN_188533	ILMN_188533	D11ERTD686E	scl41424.4.1_265				51828457	XM_110968	D11Ertd686e		ILMN_2453465	002360468	S	19	GAGCAGACTCATACTCTTGGTTGGATGAAAACAGAAAATGGTAGGCAGCT										
Mus musculus	Riken	ILMN_205096	ILMN_205096	D630044D05RIK	ri|D630044D05|PX00198I15|AK052756|1567					AK052756	D630044D05Rik		ILMN_1251112	000630739	S	1373	TCCATTACATCAACCTTGGCAAGTGGGTAGAGCAGCAAACCAGGCTCCCC										
Mus musculus	RefSeq	ILMN_219938	ILMN_219938	MED11	NM_025397.2	NM_025397.2		66172	27754137	NM_025397.2	Med11	NP_079673.2	ILMN_1257061	004920543	S	333	GCGAGTAGACTACGCCCGCCTCAAGATTAGTGATGTGGCGAGAACCTGTG	11	+	70266672-70266721	11qB3	Mus musculus mediator of RNA polymerase II transcription, subunit 11 homolog (S. cerevisiae) (Med11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		RP23-42P20.8; 1110030J09Rik; AI465144; AW545069	RP23-42P20.8; 1110030J09Rik; AI465144; AW545069
Mus musculus	RefSeq	ILMN_219938	ILMN_219938	MED11	NM_025397.2	NM_025397.2		66172	27754137	NM_025397.2	Med11	NP_079673.2	ILMN_3000536	000840278	S	408	GATGATCCAGAGTGTGCCCTGCACCAGAGACCGTAGGATGGGGAGCAGTG	11	+	70266747-70266796	11qB3	Mus musculus mediator of RNA polymerase II transcription, subunit 11 homolog (S. cerevisiae) (Med11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		RP23-42P20.8; 1110030J09Rik; AI465144; AW545069	RP23-42P20.8; 1110030J09Rik; AI465144; AW545069
Mus musculus	MEEBO	ILMN_222574	ILMN_222574	2900002G04RIK	scl54513.18.1_54	XM_136135.2			38086942	XM_136135.2	2900002G04Rik		ILMN_2751735	006940072	S	2892	AAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTTTAAAC										
Mus musculus	RefSeq	ILMN_223191	ILMN_223191	MPPED1	NM_172610.1	NM_172610.1		223726	27369875	NM_172610.1	Mpped1	NP_766198.1	ILMN_2760540	000430296	S	2952	GGTGCCTCAGATGCATGGCGTGTTTGGGGCAGAGAAAAATACATCTCCCA	15	+	83685937-83685986	15qE2	Mus musculus metallophosphoesterase domain containing 1 (Mpped1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	AW456965; D15Bwg0669e; 6230403M19	AW456965; D15Bwg0669e; 6230403M19
Mus musculus	RefSeq	ILMN_227724	ILMN_227724	SMAD3	NM_016769.2	NM_016769.2		17127	31543221	NM_016769.2	Smad3	NP_058049.2	ILMN_2938893	002450053	S	4853	CAGGGCAAGTGGGCTGGTGTGGACTCTTGTTTAGGAGGCTGAGGTTCTTG	9	-	63444960-63445009	9qC	Mus musculus MAD homolog 3 (Drosophila) (Smad3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [evidence IDA]; Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of epithelial cell proliferation [goid 50678] [evidence IMP]; The process by which the anatomical structures of the paraxial mesoderm are generated and organized. Morphogenesis pertains to the creation of form [goid 48340] [evidence IMP]; Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51098] [evidence IDA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IGI]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]	Madh3; AU022421	Madh3; AU022421
Mus musculus	MEEBO	ILMN_193546	ILMN_193546	APEX2	scl53737.7_11				21541817	NM_029943	Apex2		ILMN_2498205	004180722	S	20	ATAATTTCTTTGTTATTTCATAATTTCTTGAAAAAGTATGAATAAAATCA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193546	ILMN_193546	APEX2	scl53737.7_11				21541817	NM_029943	Apex2		ILMN_1240188	004050475	S	1811	TAATCCCCTTCAACCCTTGTTAGGGCATAAATAACATTTTGTTCATAAAT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [evidence IEA]		
Mus musculus	MEEBO	ILMN_224044	ILMN_224044	OLFR739	scl0258663.1_45				33239355	NM_146668	Olfr739		ILMN_1218342	001470288	S	576	CAGAGCCCCATTGATGGAGGTTTTCTGGGCAATTTTAGGTTCTATGCTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_220511	ILMN_220511	BC004044	NM_030565.5	NM_030565.5		80752	30842825	NM_030565.5	BC004044	NP_085042.1	ILMN_1240719	003290253	S	2248	TGAGCACAGAGCCTCCACGGAGAGGTAGTGACCAGGCTGCCCATGAGGAA	5	+	139285283-139285311:139285312-139285332	5qG2	Mus musculus cDNA sequence BC004044 (BC004044), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	C76981; MGC7673; KIAA4081; Fam20c; mKIAA4081	C76981; MGC7673; KIAA4081; Fam20c; mKIAA4081
Mus musculus	RefSeq	ILMN_220511	ILMN_220511	BC004044	NM_030565.5	NM_030565.5		80752	30842825	NM_030565.5	BC004044	NP_085042.1	ILMN_2723024	003840687	S	2268	GAGAGGTAGTGACCAGGCTGCCCATGAGGAAGGAGGAGCACAGAGCCTAG	5	+	139285303-139285311:139285312-139285352	5qG2	Mus musculus cDNA sequence BC004044 (BC004044), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	C76981; MGC7673; KIAA4081; Fam20c; mKIAA4081	C76981; MGC7673; KIAA4081; Fam20c; mKIAA4081
Mus musculus	Riken	ILMN_207222	ILMN_207222	LRBA	ri|D530014J08|PX00673I15|AK085208|1722					AK085208	Lrba		ILMN_1231819	006580561	S	1145	TTGCACAGCATATTCAGGGAGCAGGGTCTTTGCAGGTTAGAGCCATCCTC						A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence TAS]	Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISA]		
Mus musculus	RefSeq	ILMN_220307	ILMN_220307	KRT35	NM_016880.1	NM_016880.1		53617	8393683	NM_016880.1	Krt35	NP_058576.1	ILMN_1214459	003400035	S	1262	TTCCCTGCAACCCGTGTGCCCCTGACTACTCTTCCTCCAAGTCATGCCTC	11	-	99953917-99953966	11qD	Mus musculus keratin 35 (Krt35), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			Krtha5; Krt1-24; Ha5; AI662400	Krtha5; Krt1-24; Ha5; AI662400
Mus musculus	MEEBO	ILMN_212979	ILMN_212979	A630005A06RIK	scl00381605.2_275	NM_198664.1			38348561	NM_198664.1	A630005A06Rik		ILMN_1216456	005390315	S	1830	GATCAGTGAACCCACAATCCTTTTCTCCCCTACCCAAGTTTCACAACCGT										
Mus musculus	RefSeq	ILMN_196433	ILMN_196433	AI447711	XM_127714.4	XM_127714.4			38076074	XM_127714.4	AI447711		ILMN_1233365	004860706	S	108	TGTGCGGATCCTCGCGACGGTGCTACAGGGGGCATCTGAATGGAGACTCT										
Mus musculus	RefSeq	ILMN_221073	ILMN_221073	OLFR919	NM_146440.1	NM_146440.1		258432	33239209	NM_146440.1	Olfr919	NP_666651.1	ILMN_2730704	005340167	S	223	CTCTGTTACTCCACTGTTATTACCCCGAAGATGTTGGTGAACTTTGTGGC	9	-	38505689-38505738	9qA5.1	Mus musculus olfactory receptor 919 (Olfr919), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-23	MOR171-23
Mus musculus	RefSeq	ILMN_221073	ILMN_221073	OLFR919	NM_146440.1	NM_146440.1		258432	33239209	NM_146440.1	Olfr919	NP_666651.1	ILMN_2920889	003180431	S	704	CGGAAGGCAGATTCAAAGCCTTCAGCACATGTAGCTCCCACTTCTCTGCC	9	-	38505208-38505257	9qA5.1	Mus musculus olfactory receptor 919 (Olfr919), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-23	MOR171-23
Mus musculus	RefSeq	ILMN_236739	ILMN_236739	OLFR1505	NM_001011850.1	NM_001011850.1		258151	58801457	NM_001011850.1	Olfr1505	NP_001011850.1	ILMN_2886048	001990079	S	894	GGCTGCATTCAAGAAGGTTACTGGTAAATGGCAGGTCTCCCACAGCATAC	19	+	13994405-13994454	19qA	Mus musculus olfactory receptor 1505 (Olfr1505), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR211-4P	MOR211-4P
Mus musculus	Riken	ILMN_205518	ILMN_205518	D130053H12RIK	ri|D130053H12|PX00184J16|AK051503|1739					AK051503	D130053H12Rik		ILMN_2573168	000050221	S	1259	GACCCTTCTAAGACCTAAATGCTGTCAGGACAGGCACTTCAACTACAGAG										
Mus musculus	RefSeq	ILMN_222643	ILMN_222643	LRRK2	NM_025730.2	NM_025730.2		66725	56090486	NM_025730.2	Lrrk2	NP_080006.2	ILMN_2883268	007200209	S	7401	GAATGTCATGCTGGTTTTGGGGTACAAGCGGAAGAGTACAGAGGGTATCC	15	+	91645103-91645152	15qE3	Mus musculus leucine-rich repeat kinase 2 (Lrrk2), mRNA.	The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of GTP [goid 34211] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D630001M17Rik; 9330188B09Rik; 4921513O20Rik; AW561911; Gm927; cI-46	D630001M17Rik; 9330188B09Rik; 4921513O20Rik; AW561911; Gm927; cI-46
Mus musculus	RefSeq	ILMN_222643	ILMN_222643	LRRK2	NM_025730.2	NM_025730.2		66725	56090486	NM_025730.2	Lrrk2	NP_080006.2	ILMN_2883267	007200767	S	7252	TGCCTGCAGAAGAACACGGCTCTCTGGATCGGAACTGGAGGAGGCCACAT	15	+	91642693-91642742	15qE3	Mus musculus leucine-rich repeat kinase 2 (Lrrk2), mRNA.	The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of GTP [goid 34211] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D630001M17Rik; 9330188B09Rik; 4921513O20Rik; AW561911; Gm927; cI-46	D630001M17Rik; 9330188B09Rik; 4921513O20Rik; AW561911; Gm927; cI-46
Mus musculus	RefSeq	ILMN_213973	ILMN_213973	1110008J03RIK	NM_029096.1	NM_029096.1		100764	20270205	NM_029096.1	1110008J03Rik	NP_083372.1	ILMN_2803878	002600605	S	1099	GGCGAGGGGCCTGTCCTCCCAAGCCGAAGCCTCCTTGGAAGTGAGATTCT	5	-	120870079-120870086:120870087-120870128	5qF	Mus musculus RIKEN cDNA 1110008J03 gene (1110008J03Rik), mRNA.				C86297; AI853657	C86297; AI853657
Mus musculus	MEEBO	ILMN_221625	ILMN_221625	A130079P16RIK	scl0319273.2_277	NM_175685.1			46810292	NM_175685.1	A130079P16Rik		ILMN_2738066	006400246	S	3471	TTACACCTTGTAGTGTTTTTCTCTTTCACCCCCTCAATTGAGCAACAAAT										
Mus musculus	RefSeq	ILMN_219264	ILMN_259164	SENP7	NM_001003971.1	NM_001003971.1		66315	51593104	NM_001003971.1	Senp7	NP_001003971.1	ILMN_2706451	002480180	S	4418	GGTTGTCAGTCAGCCTCCGCGTCCTCGGCTTCTGCAGATCTTGACTCTCT	16	+	56189740-56189789	16qC1.1	Mus musculus SUMO1/sentrin specific peptidase 7 (Senp7), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	6030449K19Rik; mKIAA1707; AI790676; 2900036C23Rik; 2810413I22Rik; 2410152H17Rik	6030449K19Rik; mKIAA1707; AI790676; 2900036C23Rik; 2810413I22Rik; 2410152H17Rik
Mus musculus	RefSeq	ILMN_216033	ILMN_216033	1500031L02RIK	NM_025892.1	NM_025892.1		66994	13385381	NM_025892.1	1500031L02Rik	NP_080168.1	ILMN_2982736	002940414	S	1473	CCCAGAGCCACTTCCTGCGAAAGGCTGGTTTGTACAGTGGCAAGTCCTCC	16	+	32027573-32027622	16qB2	Mus musculus RIKEN cDNA 1500031L02 gene (1500031L02Rik), mRNA.				AL022620; AI428934	AL022620; AI428934
Mus musculus	RefSeq	ILMN_203841	ILMN_318460	A330017A19RIK	XR_035388.1	XR_035388.1		442840	149269362	XR_035388.1	A330017A19Rik		ILMN_1213174	005570075	S	464	GTGCCTTCTGGACTCGGTGGCCCATACAGTTCTCGGTTTCAGCCCCATCT				17qC	PREDICTED: Mus musculus RIKEN cDNA A330017A19 gene (A330017A19Rik), misc RNA.					
Mus musculus	MEEBO	ILMN_187496	ILMN_187496	6230424H07RIK	scl076138.1_19				51765636	XM_483905	6230424H07Rik		ILMN_2444643	000240673	S	3	GGAAAGTTACGTGTGATATTAAAGGCAGAATGGTTACAGTTTCTGGAATA										
Mus musculus	RefSeq	ILMN_220102	ILMN_255967	BC048651	NM_207258.2	NM_207258.2		330277	85797651	NM_207258.2	BC048651	NP_997141.2	ILMN_2717642	003140520	S	238	GCCAGATGGTTCATTCTCCAGAATTCAATCTGTTTCCTAACTCCGTGGTG	6	+	29269377-29269426	6qA3.3	Mus musculus cDNA sequence BC048651 (BC048651), mRNA.				NYD-SP18; MGC58790; Gm764	NYD-SP18; MGC58790; Gm764
Mus musculus	Riken	ILMN_203735	ILMN_203735	KSR	ri|9830134F20|PX00118G20|AK036566|2751					AK036566	Ksr		ILMN_1226093	004390017	S	2550	TGTGAGACAGCTCAGCAGGTTAGGGTGCTTGTTGCATAAGCCTGTCAGCC										
Mus musculus	RefSeq	ILMN_213802	ILMN_213802	ACYP1	NM_025421.1	NM_025421.1		66204	13384809	NM_025421.1	Acyp1	NP_079697.1	ILMN_2640961	001820576	S	419	CCAAATTGTAAAATAATGAAACGAATCTTAATATTTTTTCAAAATAATCT	12	-	86613527-86613561:86613562-86613576	12qD2	Mus musculus acylphosphatase 1, erythrocyte (common) type (Acyp1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate [goid 3998] [evidence IEA]	AI325944; 1110039O14Rik	AI325944; 1110039O14Rik
Mus musculus	RefSeq	ILMN_196861	ILMN_312704	LOC100043209	XM_001480293.1	XM_001480293.1		100043209	149262860	XM_001480293.1	LOC100043209	XP_001480343.1	ILMN_1224854	007550546	S	510	CCACAAACACAGAGAAATGCGTGGGCTGACATCTGCTGGCCGAAAGAGCC	12	+	12030313-12030362	12qA1.1	PREDICTED: Mus musculus similar to ribosomal protein L15 (LOC100043209), mRNA.					
Mus musculus	RefSeq	ILMN_211576	ILMN_312704	LOC100043209	XM_001480293.1	XM_001480293.1		100043209	149262860	XM_001480293.1	LOC100043209	XP_001480343.1	ILMN_1243415	005960100	S	259	AAACGCCCAGTTCCTAAGGGTGCAACTTACGGCAAGCCTGTCCACCATGG	12	+	12030062-12030111	12qA1.1	PREDICTED: Mus musculus similar to ribosomal protein L15 (LOC100043209), mRNA.					
Mus musculus	RefSeq	ILMN_232175	ILMN_232175	SLC2A9	NM_001012363.1	NM_001012363.1		117591	59958360	NM_001012363.1	Slc2a9	NP_001012363.1	ILMN_3108560	005220594	A	1486	GCCATGACTGAGGAGAAGGCCAACAGCCAGACTGAGCCCGATTCATCCTC	5	-	38742358-38742407	5qB3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 9 (Slc2a9), transcript variant a, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IDA]	Glut9	Glut9
Mus musculus	RefSeq	ILMN_232175	ILMN_232175	SLC2A9	NM_001012363.1	NM_001012363.1		117591	59958360	NM_001012363.1	Slc2a9	NP_001012363.1	ILMN_3034820	005900280	I	817	CTTCTGAGGGCACCCTTTGTCCGCTGGCAGGTCATCACGGTCATTATCAC	5	-	38789974-38790023	5qB3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 9 (Slc2a9), transcript variant a, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IDA]	Glut9	Glut9
Mus musculus	RefSeq	ILMN_201266	ILMN_201266	LOC385006	XM_357984.1	XM_357984.1			38090261	XM_357984.1	LOC385006		ILMN_1258443	002680358	S	202	AGCCGGGACAAGCCCCTGAAGGATGTGATAGCTGCAGACTGTGGCAGGAT										
Mus musculus	MEEBO	ILMN_187054	ILMN_187054	HTR4	scl51877.8.1_49				6680324	NM_008313	Htr4		ILMN_2776237	001440672	S	1124	CACAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGATACTTAAGCCC						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISO]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4935] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209982	ILMN_226523	GNPDA1	NM_011937.1	NM_011937.1		26384	6754029	NM_011937.1	Gnpda1	NP_036067.1	ILMN_1228139	002750286	S	81	CCCAGGCCAGTGAGTGGGCGGCCAAGTATATTAGGAACCGTATCATCCAG	18	-	38497790-38497839	18qB3	Mus musculus glucosamine-6-phosphate deaminase 1 (Gnpda1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence TAS]; The chemical reactions and pathways involving glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin [goid 6041] [evidence ISA]; The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism [goid 6002] [evidence ISA]; The chemical reactions and pathways resulting in the formation of fructose, the ketohexose arabino-2-hexulose [goid 46370] [evidence ISA]; The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3 [goid 4342] [evidence ISS]; Catalysis of the reaction: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3 [goid 4342] [evidence ISA]	KIAA0060; oscillin; Gnpi; mKIAA0060; GNPDA; Gnp1	KIAA0060; oscillin; Gnpi; mKIAA0060; GNPDA; Gnp1
Mus musculus	RefSeq	ILMN_226523	ILMN_226523	GNPDA1	NM_011937.1	NM_011937.1		26384	6754029	NM_011937.1	Gnpda1	NP_036067.1	ILMN_2852217	001050360	S	2052	GAGCTGCCTATTTCCAGGAGAGGTCTTTCAGAACATTGCCCAGGCCCTCC	18	-	38487347-38487396	18qB3	Mus musculus glucosamine-6-phosphate deaminase 1 (Gnpda1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence TAS]; The chemical reactions and pathways involving glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin [goid 6041] [evidence ISA]; The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism [goid 6002] [evidence ISA]; The chemical reactions and pathways resulting in the formation of fructose, the ketohexose arabino-2-hexulose [goid 46370] [evidence ISA]; The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3 [goid 4342] [evidence ISS]; Catalysis of the reaction: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3 [goid 4342] [evidence ISA]	KIAA0060; oscillin; Gnpi; mKIAA0060; GNPDA; Gnp1	KIAA0060; oscillin; Gnpi; mKIAA0060; GNPDA; Gnp1
Mus musculus	RefSeq	ILMN_220690	ILMN_220690	ATP5D	NM_025313.1	NM_025313.1		66043	21536219	NM_025313.1	Atp5d	NP_079589.1	ILMN_1254705	004490079	S	551	GGCTGAGATCCAGATCCGTATTGAGGCCAATGAAGCCCTAGTGAAGGCCC	10	+	79608233-79608282	10qC1	Mus musculus ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit (Atp5d), mRNA.	A proton-transporting two-sector ATPase complex that catalyzes the phosphorylation of ADP to ATP during oxidative phosphorylation. The complex comprises a membrane sector (F0) that carries out proton transport and a cytoplasmic compartment sector (F1) that catalyzes ATP synthesis by a rotational mechanism; the extramembrane sector (containing 3 a and 3 b subunits) is connected via the d-subunit to the membrane sector by several smaller subunits. Within this complex, the g and e subunits and the 9-12 c subunits rotate by consecutive 120 degree angles and perform parts of ATP synthesis. This movement is driven by the hydrogen ion electrochemical potential gradient [goid 45259] [evidence ISO]; The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled [goid 45261] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence ISO]	C85518; AU020773; 1500000I11Rik; 0610008F14Rik; AA960090; AI876556	C85518; AU020773; 1500000I11Rik; 0610008F14Rik; AA960090; AI876556
Mus musculus	RefSeq	ILMN_211182	ILMN_211182	A430107P09RIK	NM_177288.3	NM_177288.3		320898	110626019	NM_177288.3	A430107P09Rik	NP_796262.2	ILMN_2995239	006960593	S	1089	ATTCATATTGTTGTTCCTCCTATGGGGCTGCAAACCCCTTCAGTCCTTGG				14qC2	Mus musculus RIKEN cDNA A430107P09 gene (A430107P09Rik), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Va10; TRAV9-3	Va10; TRAV9-3
Mus musculus	RefSeq	ILMN_221057	ILMN_221057	1810030J14RIK	NM_025470.1	NM_025470.1		66289	13384887	NM_025470.1	1810030J14Rik	NP_079746.1	ILMN_2980898	001940328	S	460	GAAAGGCTTGAAGAAGGGATACACTGTGGGGGGTGATGCAATGATCACTC	1	+	176169210-176169259	1qH3	Mus musculus RIKEN cDNA 1810030J14 gene (1810030J14Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AV054416	AV054416
Mus musculus	Riken	ILMN_202091	ILMN_202091	2700029L05RIK	ri|2700029L05|ZX00063M15|AK012302|1738					AK012302	2700029L05Rik		ILMN_1217693	004610524	S	1512	CTGGCTGTACTGTCTGGGTGATTCTGTGTTGACCTCTTTCCAGCCCTGTG										
Mus musculus	RefSeq	ILMN_200416	ILMN_200416	LOC381702	XM_358644.1	XM_358644.1			38081763	XM_358644.1	LOC381702		ILMN_1243691	006450328	S	337	TGCATCCACCCTGTGTCCATGAGCTGTATGTCTAGGTTGTGAGGCCAGCA										
Mus musculus	RefSeq	ILMN_216679	ILMN_216679	GGH	NM_010281.2	NM_010281.2		14590	100815971	NM_010281.2	Ggh	NP_034411.2	ILMN_2975612	004120025	S	1282	CTTCTTATGTCTGAAGATTCTAAAATACAAGTTTTTGAAAATATAAAAAA					Mus musculus gamma-glutamyl hydrolase (Ggh), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the removal of terminal peptide residues that are substituted, cyclized or linked by isopeptide bonds (peptide linkages other than those of alpha-carboxyl to alpha-amino groups) [goid 8242] [evidence IEA]	gamma-GH	gamma-GH
Mus musculus	RefSeq	ILMN_216679	ILMN_216679	GGH	NM_010281.2	NM_010281.2		14590	100815971	NM_010281.2	Ggh	NP_034411.2	ILMN_2673959	002510300	S	1253	AAAAATCAGAGTGTTTTTCATGAAAATGCCTTCTTATGTCTGAAGATTCT					Mus musculus gamma-glutamyl hydrolase (Ggh), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the removal of terminal peptide residues that are substituted, cyclized or linked by isopeptide bonds (peptide linkages other than those of alpha-carboxyl to alpha-amino groups) [goid 8242] [evidence IEA]	gamma-GH	gamma-GH
Mus musculus	RefSeq	ILMN_196206	ILMN_251563	SETD7	NM_080793.5	NM_080793.5		73251	146149327	NM_080793.5	Setd7	NP_542983.3	ILMN_2522571	004480411	S	7184	CCTTACTGTGTTATGAATGAATTTTTTGTAGTGTGTCTGGGCGCATGTGC				3qC	Mus musculus SET domain containing (lysine methyltransferase) 7 (Setd7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	1600028F23Rik; Set7; mKIAA1717	1600028F23Rik; Set7; mKIAA1717
Mus musculus	RefSeq	ILMN_196206	ILMN_251563	SETD7	NM_080793.5	NM_080793.5		73251	146149327	NM_080793.5	Setd7	NP_542983.3	ILMN_1258450	004670059	S	1870	CACGTAGGGTCATTTGCCTTTTAACCTTTGATCTGTATCTCTTGCAGTAG				3qC	Mus musculus SET domain containing (lysine methyltransferase) 7 (Setd7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	1600028F23Rik; Set7; mKIAA1717	1600028F23Rik; Set7; mKIAA1717
Mus musculus	RefSeq	ILMN_196206	ILMN_251563	SETD7	NM_080793.5	NM_080793.5		73251	146149327	NM_080793.5	Setd7	NP_542983.3	ILMN_2719333	004560056	S	1609	GCTAGCCTTGCCACAACGCCCTACTGAGAGGTACTGTCGAACTGTAGACA				3qC	Mus musculus SET domain containing (lysine methyltransferase) 7 (Setd7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	1600028F23Rik; Set7; mKIAA1717	1600028F23Rik; Set7; mKIAA1717
Mus musculus	MEEBO	ILMN_184185	ILMN_184185	D330038K10RIK	scl52687.32_715				51771413	XM_488526	D330038K10Rik		ILMN_2498671	001820048	S	16	CAGAGGCAGCAGTACACTTTCAACTTTCTCTTCGCAAGGCACATCCTGAT										
Mus musculus	MEEBO	ILMN_184185	ILMN_184185	D330038K10RIK	scl52687.32_715				51771413	XM_488526	D330038K10Rik		ILMN_2416559	004610673	S	16	GACTGAGCCCCCCACGTTTGCAGATTAAATCTGTGAAGATCGGTGTTATC										
Mus musculus	RefSeq	ILMN_184357	ILMN_184357	V1RD17	NM_207545.1	NM_207545.1		404286	46430549	NM_207545.1	V1rd17	NP_997428.1	ILMN_2417982	006270129	S	858	GAGGCATTGGAGTGAAGCTTTGGTCACAGGCTTTCCCACTATCTCTCCCT	7	+	24714262-24714311	7qA3	Mus musculus vomeronasal 1 receptor, D17 (V1rd17), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218900	ILMN_228272	OLFR434	NM_146369.1	NM_146369.1		258366	22129564	NM_146369.1	Olfr434	NP_666481.1	ILMN_2701679	006040079	S	598	GCAGCTTGTGTGTTCATATTAGTGGCCCCCCTATGCTTTGTACTAGTCTC	6	+	43167511-43167560	6qB2.1	Mus musculus olfactory receptor 434 (Olfr434), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR261-10	MOR261-10
Mus musculus	Riken	ILMN_206378	ILMN_206378	5930430M20RIK	ri|5930430M20|PX00055N14|AK031219|2222					AK031219	5930430M20Rik		ILMN_1260358	005080095	S	2132	ACTCTGCATCTTCCCACTAAGGGGCCTGACTGAGGGTTCTCTGGTCTGGA										
Mus musculus	RefSeq	ILMN_198315	ILMN_230223	GM94	NM_001033280.2	NM_001033280.2		225443	113930765	NM_001033280.2	Gm94	NP_001028452.1	ILMN_1243054	003870386	S	280	GGCGATCCTGGACAGCAACCTTCAAAAGTGACCTCCTAAGGGCACACCCG	18	-	43937268-43937278:43940863-43940863:43940864-43940901	18qB3	Mus musculus gene model 94, (NCBI) (Gm94), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_230223	ILMN_230223	GM94	NM_001033280.2	NM_001033280.2		225443	113930765	NM_001033280.2	Gm94	NP_001028452.1	ILMN_2900502	002360647	S	387	AAGTTGTGCAGATCCAAAGACCTCAAGGCAGCTCCCAGCAAGTCACTGGG	18	-	43937161-43937210	18qB3	Mus musculus gene model 94, (NCBI) (Gm94), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	MEEBO	ILMN_191990	ILMN_191990	POP1	scl47998.17_92				21312813	NM_026340	Pop1		ILMN_2483986	007100392	S	16	GTTGGGAAAAGACAACAGGCTTTATGGTTGAGGCTTGAGCCATGCCAGCC								Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184769	ILMN_184769	AMBIONRNASPIKE3_EC3	AmbionRNASpike3_EC3						AmbionRNASpike3_EC3		ILMN_2421419	006450519	S	19	TAAACCGCACAACCTGCCGATGGTCTTCACCGGGACTGCCATTCTCTATA										
Mus musculus	RefSeq	ILMN_215309	ILMN_215309	TMEM57	NM_025382.5	NM_025382.5		66146	142365976	NM_025382.5	Tmem57	NP_079658.2	ILMN_2657921	004230019	S	3567	GCTTTAGCCAGGTGTGCATGTTGTCGCCATTTGCATTTTGAGTCATCTTG	4	-	134358883-134358932	4qD3	Mus musculus transmembrane protein 57 (Tmem57), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			AI606104; 1110007C24Rik; 9230118A01Rik; C61; RP23-191E19.1; AI317300	AI606104; 1110007C24Rik; 9230118A01Rik; C61; RP23-191E19.1; AI317300
Mus musculus	RefSeq	ILMN_216159	ILMN_255102	RPL35	NM_025592.3	NM_025592.3		66489	142372816	NM_025592.3	Rpl35	NP_079868.1	ILMN_1227440	002100142	S	113	ATCTGAAGGTGGAATTGTCCCAGCTTCGGGTCGCCAAAGTGACAGGCGGC	2	-	38860274-38860323	2qB	Mus musculus ribosomal protein L35 (Rpl35), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410039E09Rik	2410039E09Rik
Mus musculus	Riken	ILMN_203345	ILMN_203345	B230114H05RIK	ri|B230114H05|PX00068A22|AK045406|2077					AK045406	B230114H05Rik		ILMN_1218956	002970440	S	1794	GGGCTGTTTTGCTGGCTCTGGATGTCCGAATGTGCTGTGAGGGACTTGCG										
Mus musculus	RefSeq	ILMN_219007	ILMN_219007	RFX2	NM_009056.1	NM_009056.1		19725	6677730	NM_009056.1	Rfx2	NP_033082.1	ILMN_1217353	000990100	S	3019	GGGCCCTGAGTTCTAGAGGCCCTAACATGTTACACCTTGCTGCTGTCGTC	17	-	56915484-56915533	17qD	Mus musculus regulatory factor X, 2 (influences HLA class II expression) (Rfx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	5430432H19Rik	5430432H19Rik
Mus musculus	MEEBO	ILMN_184787	ILMN_184787	IGLJ4_J00596_IG_LAMBDA_JOINING_4_7	IGLJ4_J00596_Ig_lambda_joining_4_7						IGLJ4_J00596_Ig_lambda_joining_4_7		ILMN_1243756	006370370	S	20	TAGACTATATCAGTGTTGGGTGTTCGGAGGTGGAACCAGATTGACTGTCC										
Mus musculus	Riken	ILMN_205846	ILMN_205846	A730035I17RIK	ri|A730035I17|PX00150G22|AK042889|1761					AK042889	A730035I17Rik		ILMN_2575663	005290368	S	1703	GAAAGACTAGGAACTCTGGGGTGGGGAAACTGGGAGTAACATTTAGCATG										
Mus musculus	RefSeq	ILMN_241112	ILMN_241112	OLFR313	NM_146536.1	NM_146536.1		258529	33239057	NM_146536.1	Olfr313	NP_666747.1	ILMN_2779272	003940376	S	72	GGCCATACCAGTTTTCTTGCTCATTTACACATTTGGCCTCCTGGGGAACT	11	+	58630583-58630632	11qB1.3	Mus musculus olfactory receptor 313 (Olfr313), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR222-2; RP23-419P16.3	MOR222-2; RP23-419P16.3
Mus musculus	RefSeq	ILMN_201276	ILMN_201276	LOC382339	XM_356457.1	XM_356457.1			38090371	XM_356457.1	LOC382339		ILMN_2541717	002320411	S	346	CTGGTGTTCATGCTCTGGTTGGTATGCAAGTTCAGAACCCAACAAAAACG										
Mus musculus	RefSeq	ILMN_199306	ILMN_199306	LOC245069	XM_159529.3	XM_159529.3			38094048	XM_159529.3	LOC245069		ILMN_2534783	004730112	S	396	ATGTGAGGCCGTGGACTCAGAGGCCCTGGTGCGCTGTCTGAGAGGCAAGA										
Mus musculus	MEEBO	ILMN_213843	ILMN_213843	DDX5	scl0013207.1_56	NM_007840.1			6681156	NM_007840.1	Ddx5		ILMN_2666830	001510292	S	2233	GCAACTGTACAGTGATTTCAAATACAATAAATGAAGGCAATGCATGGCCT						A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199253	ILMN_199253	LOC236053	XM_135464.2	XM_135464.2			38093497	XM_135464.2	LOC236053		ILMN_1227272	000290021	S	595	GCAAAGGAATAGCAGGCTTCATATACCTTGGTTCACACTGACAGAGCCTG										
Mus musculus	MEEBO	ILMN_223835	ILMN_223835	PGBPLL	scl26235.9.1_65				31981749	NM_145147	Pgbpll		ILMN_1213272	001030403	S	1384	GGCTGCCTATGGCCGGTTCAGGAAATTGTTCCCCATTGACGCCCCTTCTG										
Mus musculus	RefSeq	ILMN_213588	ILMN_213588	GRK4	NM_019497.2	NM_019497.2		14772	124001567	NM_019497.2	Grk4	NP_062370.2	ILMN_2638689	004210148	S	2142	ATCTCAATGAAAATGAAGACGATTTGTCATCACTTGAAAAATACAAGATG	5	+	35094810-35094859	5qB2	Mus musculus G protein-coupled receptor kinase 4 (Grk4), transcript variant 1, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Gprk4; Gprk2l; A830025H08Rik; Grk4; GRK	Gprk4; Gprk2l; A830025H08Rik; Grk4; GRK
Mus musculus	RefSeq	ILMN_213588	ILMN_213588	GRK4	NM_019497.2	NM_019497.2		14772	124001567	NM_019497.2	Grk4	NP_062370.2	ILMN_2738928	005270437	S	2324	CAAGACCTTGGTGTTAAGAAGGAATCTATCACATACTCAGTGTCTTGTCC	5	+	35097868-35097917	5qB2	Mus musculus G protein-coupled receptor kinase 4 (Grk4), transcript variant 1, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Gprk4; Gprk2l; A830025H08Rik; Grk4; GRK	Gprk4; Gprk2l; A830025H08Rik; Grk4; GRK
Mus musculus	RefSeq	ILMN_197559	ILMN_197559	LOC207879	XM_149318.2	XM_149318.2			23601130	XM_149318.2	LOC207879		ILMN_2528553	006450270	S	643	GCGCTGGGATTATTGTACATTGATGCACACACCTTGATCTTTTCTGGGGC										
Mus musculus	RefSeq	ILMN_188788	ILMN_188788	WRNIP1	NM_030215.2	NM_030215.2		78903	31981383	NM_030215.2	Wrnip1	NP_084491.2	ILMN_2455719	004670619	S	2531	AATTGGTACAAGAAAATGTAATTGTGATTTAATACTGCATAGTGATTTGG	13	+	32914376-32914425	13qA3.2	Mus musculus Werner helicase interacting protein 1 (Wrnip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Wrnip; 4833444L21Rik; WHIP	Wrnip; 4833444L21Rik; WHIP
Mus musculus	MEEBO	ILMN_212175	ILMN_212175	EDARADD	scl0003747.1_31	NM_175746.2			31341797	NM_175746.2	Edaradd		ILMN_1236506	003170632	S	1608	TCAAATACTTTTGTAATCTATAGGCTATCAATACTGTCATTGAATTTAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence NAS]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a death receptor [goid 5123] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_213064	ILMN_312472	LOC100047788	XR_033948.1	XR_033948.1		100047788	149274774	XR_033948.1	LOC100047788		ILMN_2677207	002760243	S	704	GAGCTCCACAGGTATATGTCTTGCCTCCACCAGCAGAAGAGATGACTAAG					PREDICTED: Mus musculus similar to gamma-2a immunoglobulin heavy chain (LOC100047788), misc RNA.					
Mus musculus	RefSeq	ILMN_213064	ILMN_312472	LOC100047788	XR_033948.1	XR_033948.1		100047788	149274774	XR_033948.1	LOC100047788		ILMN_2633179	004810040	S	942	CGCCTGCTCAGTGGTCCACGAGGGTCTGCACAATCACCTTACGACTAAGA					PREDICTED: Mus musculus similar to gamma-2a immunoglobulin heavy chain (LOC100047788), misc RNA.					
Mus musculus	Riken	ILMN_203868	ILMN_203868	A630029M15RIK	ri|A630029M15|PX00144N13|AK041682|2899					AK041682	A630029M15Rik		ILMN_2560577	004050482	S	2416	GAGAATGGAAAGCAGGCCCCAAAGTGTCCCTCCTCCTGTTAGAATGTCCC										
Mus musculus	RefSeq	ILMN_208903	ILMN_310319	1810062G17RIK	XM_001475130.1	XM_001475130.1		72282	149250850	XM_001475130.1	1810062G17Rik	XP_001475180.1	ILMN_2590627	005820167	S	570	CTTCCCAGTTTTAGTCTGAGGCTTCTCTAGGGACGCCTGTGCTGCAGCTG	3	+	36380880-36380898:36380899-36380929	3qB	PREDICTED: Mus musculus RIKEN cDNA 1810062G17 gene (1810062G17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210928	ILMN_210928	CDH15	NM_007662.2	NM_007662.2		12555	119964693	NM_007662.2	Cdh15	NP_031688.2	ILMN_2610645	007650370	S	2573	GCATGGCCCATCCTTGGCTCCATGGCAGATAAACTCAAGGAGGTCATCTC	8	+	125391027-125391076	8qE1	Mus musculus cadherin 15 (Cdh15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cdh14; AI323380; Mcad	Cdh14; AI323380; Mcad
Mus musculus	RefSeq	ILMN_209044	ILMN_207458	SPIN1	NM_011462.2	NM_011462.2		20729	119709810	NM_011462.2	Spin1	NP_035592.1	ILMN_1216718	007650521	S	1977	GGCAGTGTCTGTTCCTGCCCCAGGTGTGCTATTCACGCAGGTTTATTCCC	13	+	51245756-51245805	13qA5	Mus musculus spindlin 1 (Spin1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle in the female germline [goid 7143] [evidence IC ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA673430; Spin; MGC27756; AA553322	AA673430; Spin; MGC27756; AA553322
Mus musculus	RefSeq	ILMN_209875	ILMN_209875	SLC35A5	NM_028756.3	NM_028756.3		74102	142388911	NM_028756.3	Slc35a5	NP_083032.2	ILMN_2719115	001850397	S	2835	GATATTACTATTATTATAATCCATCTGTCTACCCAGAATAATATAACTGT	16	-	45140967-45141016	16qB5	Mus musculus solute carrier family 35, member A5 (Slc35a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]	BB097433; D16Ertd450e; 1010001J06Rik; D730043G07Rik; AU021179	BB097433; D16Ertd450e; 1010001J06Rik; D730043G07Rik; AU021179
Mus musculus	RefSeq	ILMN_209875	ILMN_209875	SLC35A5	NM_028756.3	NM_028756.3		74102	142388911	NM_028756.3	Slc35a5	NP_083032.2	ILMN_2600043	007000255	S	3795	GTGGAAGCCCTGTTGCTTGGGAGGTAGCTATTGTGGCTTTGTTACTGCTA	16	-	45140007-45140056	16qB5	Mus musculus solute carrier family 35, member A5 (Slc35a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]	BB097433; D16Ertd450e; 1010001J06Rik; D730043G07Rik; AU021179	BB097433; D16Ertd450e; 1010001J06Rik; D730043G07Rik; AU021179
Mus musculus	RefSeq	ILMN_220954	ILMN_254957	FBXL20	NM_028149.1	NM_028149.1		72194	111494220	NM_028149.1	Fbxl20	NP_082425.1	ILMN_2729097	003800630	S	2316	CCTTCAGTCTGTCCTCAGGATGCTGCCCACTCGATTGTTACTATGTTGCT	11	-	97950109-97950158	11qD	Mus musculus F-box and leucine-rich repeat protein 20 (Fbxl20), mRNA. XM_903031 XM_903032 XM_903033 XM_915017 XM_923494 XM_923501 XM_923516 XM_923522 XM_923532 XM_923536 XM_982900 XM_982933 XM_982970 XM_983008 XM_983045 XM_983087 XM_983129 XM_983157 XM_992930	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL117906; AI849362; mKIAA4147; KIAA4147; Fbl2; 4632423N09Rik; C86145; 2610511F20Rik	AL117906; AI849362; mKIAA4147; KIAA4147; Fbl2; 4632423N09Rik; C86145; 2610511F20Rik
Mus musculus	RefSeq	ILMN_212765	ILMN_254957	FBXL20	NM_028149.1	NM_028149.1		72194	111494220	NM_028149.1	Fbxl20	NP_082425.1	ILMN_2630029	003370450	S	8546	ATTATTGTTCCTGTATGTTCTAATTTTGTTTTATGATGTAATTAAAGGAA	11	-	97943879-97943928	11qD	Mus musculus F-box and leucine-rich repeat protein 20 (Fbxl20), mRNA. XM_903031 XM_903032 XM_903033 XM_915017 XM_923494 XM_923501 XM_923516 XM_923522 XM_923532 XM_923536 XM_982900 XM_982933 XM_982970 XM_983008 XM_983045 XM_983087 XM_983129 XM_983157 XM_992930	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL117906; AI849362; mKIAA4147; KIAA4147; Fbl2; 4632423N09Rik; C86145; 2610511F20Rik	AL117906; AI849362; mKIAA4147; KIAA4147; Fbl2; 4632423N09Rik; C86145; 2610511F20Rik
Mus musculus	Riken	ILMN_206797	ILMN_206797	D7ERTD70E	ri|A330083D13|PX00133A22|AK079628|885					AK079628	D7Ertd70e		ILMN_1250328	004920307	S	531	CCCGACTTGTGACACCAAATAGACCGGTTCGTTATCCAGGCCACCCAGAC										
Mus musculus	RefSeq	ILMN_222903	ILMN_323922	OGFOD1	NM_001093757.1	NM_001093757.1		270086	148224283	NM_001093757.1	Ogfod1	NP_001087226.1	ILMN_2756496	007210630	S	4763	GTCAGCTGAAACCCCTTGCCACCACCCTTTGACAACTGTGTGCTGCCGTA				8qC5	Mus musculus 2-oxoglutarate and iron-dependent oxygenase domain containing 1 (Ogfod1), transcript variant 2, mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]	AA387199; AA939912; 4930415J21Rik; mKIAA1612; AW061076	AA387199; AA939912; 4930415J21Rik; mKIAA1612; AW061076
Mus musculus	RefSeq	ILMN_256640	ILMN_256640	DNAJB3	NM_008299.1	NM_008299.1		15504	6680298	NM_008299.1	Dnajb3	NP_032325.1	ILMN_2869728	000460561	S	595	TCTTCTTTCTCCATGTCTTGCGGCGGTGGGGCGGCAGGCAACTACAAGTC	1	-	90036275-90036324	1qD	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 3 (Dnajb3), mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	Msj1; MSJ-1; Hsj3	Msj1; MSJ-1; Hsj3
Mus musculus	Riken	ILMN_206960	ILMN_206960	E130002D13RIK	ri|E130002D13|PX00207C23|AK087378|1467					AK087378	E130002D13Rik		ILMN_1219600	004560392	S	1288	TTAGAAGGACTCTCTCCTCAGCGGGGCCACAGCCCACATTCACCCTGTGA										
Mus musculus	RefSeq	ILMN_191274	ILMN_242301	MAGEE2	NM_053206.2	NM_053206.2		272790	148352327	NM_053206.2	Magee2	NP_444436.1	ILMN_2477690	000780605	S	1553	GCTAATGAGGCAACGCTACCTAGAATGCAGGCCGCTCTCCTACTCGAATC				XqD	Mus musculus melanoma antigen, family E, 2 (Magee2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mage-e2; BB131182; 9630059J11Rik	Mage-e2; BB131182; 9630059J11Rik
Mus musculus	RefSeq	ILMN_185154	ILMN_259520	ANGPTL4	NM_020581.1	NM_020581.1		57875	10181163	NM_020581.1	Angptl4	NP_065606.1	ILMN_2759365	001710215	S	1578	CCAGAAAACATGGGCTCGAGGGGCACTGAATATCACTTCTCGCCTACCAG	17	-	33914308-33914357	17qB1	Mus musculus angiopoietin-like 4 (Angptl4), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]	A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment [goid 9267] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; Any process that stops or reduces the activity of the enzyme lipoprotein lipase [goid 51005] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipids [goid 45834] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HFARP; Bk89; PGARG; PGAR; pp1158; ARP4; Ng27; FIAF	HFARP; Bk89; PGARG; PGAR; pp1158; ARP4; Ng27; FIAF
Mus musculus	RefSeq	ILMN_219148	ILMN_219148	NGLY1	NM_021504.3	NM_021504.3		59007	142352411	NM_021504.3	Ngly1	NP_067479.2	ILMN_2704895	000430279	S	2175	GTGGACCATAAGAAATCTTCAATTAAATGCTAACTTCTGCCTGTGATTAG	14	+	17114215-17114264	14qA2	Mus musculus N-glycanase 1 (Ngly1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [evidence IDA]	Catalysis of the hydrolysis of an N4-(acetyl-beta-D-glucosaminyl)asparagine residue in which the N-acetyl-D-glucosamine residue may be further glycosylated, to yield a (substituted) N-acetyl-beta-D-glucosaminylamine and the peptide containing an aspartic residue [goid 224] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Png1; 1110002C09Rik; PNGase	Png1; 1110002C09Rik; PNGase
Mus musculus	RefSeq	ILMN_215608	ILMN_215608	PPME1	NM_028292.2	NM_028292.2		72590	118130470	NM_028292.2	Ppme1	NP_082568.1	ILMN_1234766	000010184	S	2269	CTGTCCTGCTGCACGGTCCAGAGTCTGGGACCGACTTTGTTTCTTTGTTA	7	-	107475289-107475338	7qE3	Mus musculus protein phosphatase methylesterase 1 (Ppme1), mRNA.			Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2700017M01Rik; Pme1; 1110069N17Rik	2700017M01Rik; Pme1; 1110069N17Rik
Mus musculus	Riken	ILMN_203119	ILMN_203119	4933440L10RIK	ri|4933440L10|PX00021N12|AK030273|2457					AK030273	4933440L10Rik		ILMN_2554862	002070187	S	2210	GGCTGTGTGCCACCACTGCCTGGTGAAATATTTCTGTTAGATGGTGACAC										
Mus musculus	RefSeq	ILMN_220865	ILMN_220865	GMIP	NM_198101.1	NM_198101.1		78816	37674213	NM_198101.1	Gmip	NP_932769.1	ILMN_2727911	001940739	S	3347	CATAATGGCTCCTGGCCCTACTACACTTGCAGCAGTAACAGACTCCCAAG	8	+	72345191-72345240	8qB3.3	Mus musculus Gem-interacting protein (Gmip), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	5031419I10Rik	5031419I10Rik
Mus musculus	RefSeq	ILMN_220865	ILMN_220865	GMIP	NM_198101.1	NM_198101.1		78816	37674213	NM_198101.1	Gmip	NP_932769.1	ILMN_2788574	003400114	S	3594	GGGCTGACCGCAGTGGTGCTTGCTGTAAAGCCTCACATTTGTTGGACCTC	8	+	72345438-72345487	8qB3.3	Mus musculus Gem-interacting protein (Gmip), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	5031419I10Rik	5031419I10Rik
Mus musculus	RefSeq	ILMN_208823	ILMN_208823	OLFR444	NM_146656.1	NM_146656.1		258650	33238921	NM_146656.1	Olfr444	NP_666867.1	ILMN_2589875	002070630	S	405	GAGTTGGAAAGTGTGTACCATCCTGGCAGCTGTCTCCTGGATAGCTGGCT	6	+	42905903-42905952	6qB2.1	Mus musculus olfactory receptor 444 (Olfr444), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR261-2	MOR261-2
Mus musculus	RefSeq	ILMN_208823	ILMN_208823	OLFR444	NM_146656.1	NM_146656.1		258650	33238921	NM_146656.1	Olfr444	NP_666867.1	ILMN_2873422	004200274	S	448	GCTGGCTTCCTTTTGGCTCTGGTTCATTTGGTTCTCATCCTGAAGCTGCC	6	+	42905946-42905995	6qB2.1	Mus musculus olfactory receptor 444 (Olfr444), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR261-2	MOR261-2
Mus musculus	RefSeq	ILMN_198944	ILMN_198944	LOC272633	XM_195759.3	XM_195759.3			38089986	XM_195759.3	LOC272633		ILMN_2533481	001260711	S	2	TGGAGCCTGAACCAACAATCCCAGTGACTCCTCTTCAGCAAATGATTGCC										
Mus musculus	RefSeq	ILMN_213449	ILMN_213449	SPSB2	NM_013539.1	NM_013539.1		14794	7305112	NM_013539.1	Spsb2	NP_038567.1	ILMN_1254644	001770181	S	991	CCTACCGTGGGGACAGGTGGAGAGGCACCCGCTGGCCTAGACAACTTTAA	6	+	124756401-124756450	6qF2	Mus musculus splA/ryanodine receptor domain and SOCS box containing 2 (Spsb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		C9; AI461677; Grcc9; SSB2	C9; AI461677; Grcc9; SSB2
Mus musculus	RefSeq	ILMN_210608	ILMN_237536	3830417A13RIK	NM_027512.1	NM_027512.1		70696	58037214	NM_027512.1	3830417A13Rik	NP_081788.1	ILMN_2607348	005960528	S	1291	TCAGGCAGAACAGTAAAATAAGTGGTAGACCCCCAAATGAGAGGTATTGG	X	+	61431609-61431658	XqA6	Mus musculus RIKEN cDNA 3830417A13 gene (3830417A13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223576	ILMN_317040	4930545L08RIK	XM_001481069.1	XM_001481069.1		78028	149260385	XM_001481069.1	4930545L08Rik	XP_001481119.1	ILMN_2766003	000990204	S	472	GCACAAAATTCTTAGTTGTCCATTGTAATATTTTATTTACATTTATGTTA	9	-	111814859-111814908	9qF3	PREDICTED: Mus musculus RIKEN cDNA 4930545L08 gene (4930545L08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198047	ILMN_198047	LOC279730	XM_207165.3	XM_207165.3			38080951	XM_207165.3	LOC279730		ILMN_1226687	007330373	S	1937	CCAGAAGCTGGAAAGAACCCAGATACCCCTCAACAGAGCAATGGATACAC										
Mus musculus	RefSeq	ILMN_220569	ILMN_220569	HCFC1	NM_008224.3	NM_008224.3		15161	118130908	NM_008224.3	Hcfc1	NP_032250.2	ILMN_2723881	002370674	S	8009	GAGTAACCCTTGTGACTCAATATTACCATAGTGCGATGTTGTTTTGTGCT	X	-	71195076-71195125	XqA7.3	Mus musculus host cell factor C1 (Hcfc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The reactivation of a virus from a latent to a lytic state [goid 19046] [evidence IDA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]	AW060991; HCF-1; HCF1	AW060991; HCF-1; HCF1
Mus musculus	RefSeq	ILMN_244230	ILMN_244230	2310008H04RIK	NM_146068.2	NM_146068.2		224008	31541867	NM_146068.2	2310008H04Rik	NP_666180.2	ILMN_2964816	001770397	S	2494	CGGTGTGGCAATGGGAGACTGGAACAGAAGCCAGAAGATGGAGGCACCTT	16	-	15809208-15809218:15810802-15810840	16qA2	Mus musculus RIKEN cDNA 2310008H04 gene (2310008H04Rik), mRNA.				MGC115787; MGC30630	MGC115787; MGC30630
Mus musculus	RefSeq	ILMN_214550	ILMN_214550	OLFR1234	NM_146973.1	NM_146973.1		258975	22128980	NM_146973.1	Olfr1234	NP_667184.1	ILMN_1229384	006380768	S	636	CCTAGTTTCTTATGGAGTCATTTTACACTCCCTTAAGGCACATAGTCTGG	2	-	89202899-89202948	2qE1	Mus musculus olfactory receptor 1234 (Olfr1234), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR231-2	MOR231-2
Mus musculus	RefSeq	ILMN_218486	ILMN_218486	ATP6V1A	NM_007508.5	NM_007508.5		11964	142343848	NM_007508.5	Atp6v1a	NP_031534.2	ILMN_1255570	000020600	S	2448	CAGGACCATTTTTGTGGGGCACTTGGGAACTATTTGTTTTTCAAACAGAC	16	-	44086965-44087014	16qB4	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit A (Atp6v1a), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	AI647066; Atp6a2; Atp6a1; VA68; Atp6v1a1; VPP2	AI647066; Atp6a2; Atp6a1; VA68; Atp6v1a1; VPP2
Mus musculus	RefSeq	ILMN_219141	ILMN_219141	FCHSD2	NM_199012.1	NM_199012.1		207278	39841024	NM_199012.1	Fchsd2	NP_950177.1	ILMN_2798086	005260079	S	4223	TTCTCTCCAGGCCGAATAACCCGGCGTCACCATGCACAGGTCAGGGCTCA	7	+	108432769-108432818	7qE3	Mus musculus FCH and double SH3 domains 2 (Fchsd2), mRNA.				BC034086; Sh3md3; R74866; mKIAA0769	BC034086; Sh3md3; R74866; mKIAA0769
Mus musculus	RefSeq	ILMN_195892	ILMN_229957	CLASP1	NM_001081276.1	NM_001081276.1		76707	124486878	NM_001081276.1	Clasp1	NP_001074745.1	ILMN_1247054	003610379	S	7722	GTTTCACTTCCCAAGTGTATCATGGCAAATGTACAGATTTTTTGTTGTTG	1	+	120505934-120505983	1qE2.3	Mus musculus CLIP associating protein 1 (Clasp1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	1700030C23Rik; mCLASP1; B130045P17Rik; 5730583A19Rik; mKIAA0622; KIAA0622	1700030C23Rik; mCLASP1; B130045P17Rik; 5730583A19Rik; mKIAA0622; KIAA0622
Mus musculus	RefSeq	ILMN_204031	ILMN_229957	CLASP1	NM_001081276.1	NM_001081276.1		76707	124486878	NM_001081276.1	Clasp1	NP_001074745.1	ILMN_1254008	001660603	S	694	GGGAGTCATCCTGACCGCCCTCTAGCCTTGGCCAGCTCTGGATTTGAATC	1	+	120316246-120316295	1qE2.3	Mus musculus CLIP associating protein 1 (Clasp1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	1700030C23Rik; mCLASP1; B130045P17Rik; 5730583A19Rik; mKIAA0622; KIAA0622	1700030C23Rik; mCLASP1; B130045P17Rik; 5730583A19Rik; mKIAA0622; KIAA0622
Mus musculus	MEEBO	ILMN_223878	ILMN_223878	MYOC	scl17295.1_80				31560807	NM_010865	Myoc		ILMN_2770901	004850047	S	548	TTTGGCCAGGAGGCTAGAAAGCAGCAGCGAGGAGGTAACAAGGCTGCGGA						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_223878	ILMN_223878	MYOC	scl17295.1_80				31560807	NM_010865	Myoc		ILMN_1233102	006520338	S	546	GATTTGGCCAGGAGGCTAGAAAGCAGCAGCGAGGAGGTAACAAGGCTGCG						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_203399	ILMN_203399	DMTF1	ri|5330423H07|PX00054K02|AK030508|3025					AK030508	Dmtf1		ILMN_1215660	006280348	S	2538	ATCCAAGCCAGAGTAGCCTGCCCAGCAAATCCAAGGCACATCTCTAGGAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215799	ILMN_215799	5730521P14RIK	scl070637.4_12	XM_132817.3			38085012	XM_132817.3	5730521P14Rik		ILMN_2698553	004890487	S	3651	CAGAAACTTACCGAGTTGAAGGAGTCTCTGGAATGTACTGTGGATCAAGA										
Mus musculus	RefSeq	ILMN_212861	ILMN_212861	MARK4	NM_172279.1	NM_172279.1		232944	26986590	NM_172279.1	Mark4	NP_758483.1	ILMN_2631094	004480445	S	2209	CTGGCCTTCCGCACCCTCGTCACCCGCATCTCCAACGACCTCGAACTCTG	7	-	20011424-20011473	7qA3	Mus musculus MAP/microtubule affinity-regulating kinase 4 (Mark4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	C79806; Markl1; 2410090P21Rik	C79806; Markl1; 2410090P21Rik
Mus musculus	RefSeq	ILMN_219075	ILMN_219075	CALM3	NM_007590.3	NM_007590.3		12315	114326464	NM_007590.3	Calm3	NP_031616.1	ILMN_1215681	001240554	S	2014	TAGAGTTGAGGGCAAGGGCAGGTAGGCGTGAGGCTGTGGACTTTGCGGAA	7	-	17500872-17500921	7qA2	Mus musculus calmodulin 3 (Calm3), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]	R75142; CaMA	R75142; CaMA
Mus musculus	RefSeq	ILMN_220151	ILMN_220151	RETNLB	NM_023881.2	NM_023881.2		57263	34328326	NM_023881.2	Retnlb	NP_076370.2	ILMN_2909979	001850605	S	288	CCCACTGATAGTCCCAGGGAACGCGCAATGCTCCTTTGAGTCTTTGGTGG	16	+	48736885-48736934	16qB5	Mus musculus resistin like beta (Retnlb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Relmb; Xcp3; RELMbeta; 9030012B21Rik; Fizz2	Relmb; Xcp3; RELMbeta; 9030012B21Rik; Fizz2
Mus musculus	MEEBO	ILMN_222370	ILMN_222370	PPP3R1	scl019058.3_34	NM_024459.1			13277369	NM_024459.1	Ppp3r1		ILMN_1234428	007320091	S	539	GTGAATAGGCTGATTCATCTATTAACTCTTACCACTCATGAAGGACAGTT							The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219480	ILMN_232584	ZFP707	NM_001081065.1	NM_001081065.1		69020	124486707	NM_001081065.1	Zfp707	NP_001074534.1	ILMN_2709392	002940228	S	1403	CCGGCCTGAGTGTCACTTGTACGCACTTTAACTCTTCTCTCTCCTAGCTC	15	+	75805882-75805931	15qD3	Mus musculus zinc finger protein 707 (Zfp707), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW495315; 1500031N24Rik; AI451708	AW495315; 1500031N24Rik; AI451708
Mus musculus	RefSeq	ILMN_198316	ILMN_198316	LOC328950	XM_286894.2	XM_286894.2			38083820	XM_286894.2	LOC328950		ILMN_2531251	003610427	S	550	CTGCTGGAGTATGGCGGAAGCTCTTTGCCTCAGCAGGCTGTGCTCCACAA										
Mus musculus	RefSeq	ILMN_190172	ILMN_257277	PIP5K1A	NM_008847.2	NM_008847.2		18720	31982832	NM_008847.2	Pip5k1a	NP_032873.2	ILMN_1254010	004250608	S	2415	GCTGGACATTGTTCCTGCCTTGGCTCTCCCGCTGGTCTTTGGAGACTCCC	3	-	94863588-94863637	3qF2.1	Mus musculus phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha (Pip5k1a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [evidence IDA]	Pipk5a; Pipk5b; Pip5k1b	Pipk5a; Pipk5b; Pip5k1b
Mus musculus	RefSeq	ILMN_190172	ILMN_257277	PIP5K1A	NM_008847.2	NM_008847.2		18720	31982832	NM_008847.2	Pip5k1a	NP_032873.2	ILMN_2609412	004590561	S	1743	AAAAAGTTTCGGTCTGGCCCGTCTTTCTCTCGGCGATCAGGCCCCAGCGG	3	-	94868329-94868378	3qF2.1	Mus musculus phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha (Pip5k1a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [evidence IDA]	Pipk5a; Pipk5b; Pip5k1b	Pipk5a; Pipk5b; Pip5k1b
Mus musculus	RefSeq	ILMN_214365	ILMN_313261	LOC100047126	XM_001477492.1	XM_001477492.1		100047126	149240776	XM_001477492.1	LOC100047126	XP_001477542.1	ILMN_2647251	000010097	S	1753	CGGTAGGATGGACATCGGCCAGGTAGCCATTTTGTGTTCGAGTGGCTGCA					PREDICTED: Mus musculus similar to Sctr protein, transcript variant 1 (LOC100047126), mRNA.					
Mus musculus	RefSeq	ILMN_185835	ILMN_261049	DDX56	NM_026538.3	NM_026538.3		52513	133893145	NM_026538.3	Ddx56	NP_080814.1	ILMN_2723217	000160189	S	3001	CTGGACAGTTCGGTGGACTGAGGTGGATGTTGGTCCATGCCTGCTGTTCC	11	-	6157784-6157833	11qA1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 (Ddx56), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	D11Ertd619e; Noh61; 2600001H07Rik	D11Ertd619e; Noh61; 2600001H07Rik
Mus musculus	RefSeq	ILMN_219921	ILMN_219921	RNMTL1	NM_183263.3	NM_183263.3		67390	146198745	NM_183263.3	Rnmtl1	NP_899086.1	ILMN_2715234	005550091	S	1099	AACTGGCCGAGAGTACCGGTGGCAAGAGACTGCTGATCCCCGTTGTACCT				11qB5	Mus musculus RNA methyltransferase like 1 (Rnmtl1), mRNA.		Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule [goid 8173] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	RP23-147P4.7; 4833420N02Rik; AI255153; HC90	RP23-147P4.7; 4833420N02Rik; AI255153; HC90
Mus musculus	RefSeq	ILMN_210945	ILMN_210945	AP3B1	NM_009680.2	NM_009680.2		11774	7106253	NM_009680.2	Ap3b1	NP_033810.1	ILMN_2610861	005870497	S	3307	GGCTCCACAGCCCAGCTTATCATCAACACCGAGAAAACCGTGATTGGTTC	13	+	95335629-95335678	13qD1	Mus musculus adaptor-related protein complex 3, beta 1 subunit (Ap3b1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The process of directing proteins towards the lysosome using signals contained within the protein [goid 6622] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]; The process by which an antigen-presenting cell expresses lipid antigen of exogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family [goid 48007] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation [goid 51138] [evidence IMP]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C78395; AU015684; Hps2; beta3A; rim2; pearl; pe	C78395; AU015684; Hps2; beta3A; rim2; pearl; pe
Mus musculus	RefSeq	ILMN_210945	ILMN_210945	AP3B1	NM_009680.2	NM_009680.2		11774	7106253	NM_009680.2	Ap3b1	NP_033810.1	ILMN_1236150	004220746	S	3290	AGTGGAACTGAAGGAAGGCTCCACAGCCCAGCTTATCATCAACACCGAGA	13	+	95335612-95335661	13qD1	Mus musculus adaptor-related protein complex 3, beta 1 subunit (Ap3b1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The process of directing proteins towards the lysosome using signals contained within the protein [goid 6622] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]; The process by which an antigen-presenting cell expresses lipid antigen of exogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family [goid 48007] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation [goid 51138] [evidence IMP]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C78395; AU015684; Hps2; beta3A; rim2; pearl; pe	C78395; AU015684; Hps2; beta3A; rim2; pearl; pe
Mus musculus	RefSeq	ILMN_248318	ILMN_248318	TLE3	NM_009389.1	NM_009389.1		21887	6678360	NM_009389.1	Tle3	NP_033415.1	ILMN_2984872	000430577	S	2694	CAGAAGGTGGAGAGGACGCACGCCCTTCGTGGATTGATGTGTCTGACAGA	9	+	61264641-61264690	9qB	Mus musculus transducin-like enhancer of split 3, homolog of Drosophila E(spl) (Tle3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]		mKIAA1547; ESG; Grg3a; Grg3b; 2610103N05Rik	mKIAA1547; ESG; Grg3a; Grg3b; 2610103N05Rik
Mus musculus	RefSeq	ILMN_219157	ILMN_219157	BTLA	NM_177584.3	NM_177584.3		208154	83700228	NM_177584.3	Btla	NP_808252.1	ILMN_3116935	006980672	A	2865	AAGGGAAGGTCTCTCATTGAACCTGGAGCTCTGCTAGCAAGCAGCAAGCC	16	+	45252641-45252690	16qB5	Mus musculus B and T lymphocyte associated (Btla), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; A series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell capable of activating, perpetuating, or inhibiting an immune response [goid 2768] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of alpha-beta T cell proliferation [goid 46642] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IGI]	MGC124217; A630002H24; MGC124218	MGC124217; A630002H24; MGC124218
Mus musculus	MEEBO	ILMN_211142	ILMN_211142	SULT1C2	scl49794.7.1_23	NM_026935.3			34328500	NM_026935.3	Sult1c2		ILMN_2612973	001580377	S	924	CAAATCGTTCTACGGCCCCCAAATCTATCCTGGACCAGTCCATTTCCCCT						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]		
Mus musculus	Riken	ILMN_204863	ILMN_204863	A130067E09RIK	ri|A130067E09|PX00124P19|AK079497|1716					AK079497	A130067E09Rik		ILMN_1249303	003140639	S	1486	CCCAAGAGGCTTAACGGGAGAGTCAGTGAGTTGTTAAAAGGCGGGAAGGG										
Mus musculus	RefSeq	ILMN_216156	ILMN_216156	SARDH	NM_138665.1	NM_138665.1		192166	20149747	NM_138665.1	Sardh	NP_619606.1	ILMN_2903455	002650309	S	2906	GACCCTGACAACAAGCGGGTGAAGGGAATCTATTGATGGGATGCAGGTGG	2	-	27045024-27045038:27045039-27045073	2qA3	Mus musculus sarcosine dehydrogenase (Sardh), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid [goid 6546] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein [goid 4047] [evidence IEA]; Catalysis of the reaction: sarcosine + acceptor + H2O = glycine + formaldehyde + reduced acceptor [goid 8480] [evidence IEA]	MGC6279	MGC6279
Mus musculus	RefSeq	ILMN_187679	ILMN_241064	OLFR75-PS1	NR_002859.1	NR_002859.1		258186	84872150	NR_002859.1	Olfr75-ps1		ILMN_2446184	001990746	S	278	GGATTAACTTCCGTGGTATTCCAAGTTGCACACTCTACTCCTTGGCTAGG	11	-	73219383-73219432	11qB4	Mus musculus olfactory receptor 75, pseudogene 1 (Olfr75-ps1), non-coding RNA.				MOR135-20; V1; Olfr75	MOR135-20; V1; Olfr75
Mus musculus	RefSeq	ILMN_215381	ILMN_215381	E2F7	NM_178609.4	NM_178609.4		52679	115270983	NM_178609.4	E2f7	NP_848724.2	ILMN_2658795	002760563	S	5043	TAACTGTTAAAGGAGGGCATGGGCTTTGGGTCAGCACTGAGGGGATGTGC	10	+	110224007-110224056	10qD1	Mus musculus E2F transcription factor 7 (E2f7), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	D10Ertd739e; A630014C11Rik	D10Ertd739e; A630014C11Rik
Mus musculus	RefSeq	ILMN_217135	ILMN_217135	SPATA17	NM_028848.1	NM_028848.1		74717	29789228	NM_028848.1	Spata17	NP_083124.1	ILMN_2899488	002600291	S	983	TTGGAACAGCGTTATAAGCCTTTGGAGCCTACCCTGAGGGTGGCAGAACC	1	-	188813336-188813385	1qH5	Mus musculus spermatogenesis associated 17 (Spata17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	MSRG-11; MGC107213; 4930504I07Rik; 4930513F16Rik; 1700065F16Rik	MSRG-11; MGC107213; 4930504I07Rik; 4930513F16Rik; 1700065F16Rik
Mus musculus	RefSeq	ILMN_216709	ILMN_216709	NGRN	NM_031375.3	NM_031375.3		83485	142373623	NM_031375.3	Ngrn	NP_113552.2	ILMN_2674296	006560064	S	1540	GTTGAGAACAAGAATTATATGTATCCTGTGGTGGATTTTTGTGATACTAT	7	+	87410091-87410140	7qD3	Mus musculus neugrin, neurite outgrowth associated (Ngrn), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		AW552001	AW552001
Mus musculus	RefSeq	ILMN_210884	ILMN_247195	BGLAP1	NM_001037939.1	NM_001037939.1		12096	83816946	NM_001037939.1	Bglap1	NP_001033028.1	ILMN_2610166	004540537	S	44	GACACCATGAGGACCATCTTTCTGCTCACTCTGCTGACCCTGGCTGCGCT	3	-	88188293-88188337:88188338-88188342	3qF1	Mus musculus bone gamma carboxyglutamate protein 1 (Bglap1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	OC; mOC-A; Bglap; OG1	OC; mOC-A; Bglap; OG1
Mus musculus	Riken	ILMN_205252	ILMN_205252	E230022G02RIK	ri|E230022G02|PX00210G17|AK054129|1472					AK054129	E230022G02Rik		ILMN_1223585	002360551	S	1152	CTAGAACCGTGTAAGCCTAGAATCATGTGAGCCTGTGACCATGTGACCCT										
Mus musculus	RefSeq	ILMN_252566	ILMN_252566	ORM3	NM_013623.2	NM_013623.2		18407	62548315	NM_013623.2	Orm3	NP_038651.2	ILMN_3160335	004560647	S	348	GGGACCCTCTTCAAGTATGAAGGAGAAGTAGAAACCCTTCTCCACCTGAG	4	+	63017997-63018015:63018578-63018608	4qC1	Mus musculus orosomucoid 3 (Orm3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Orm-3; Agp-3	Orm-3; Agp-3
Mus musculus	RefSeq	ILMN_201180	ILMN_201180	LOC384901	XM_357930.1	XM_357930.1			38089638	XM_357930.1	LOC384901		ILMN_1246608	001850358	S	164	AGAAGTCATCGTCCAGCGGGGCTCCTAAGAGACATCGAGTTCAGGAAGAG										
Mus musculus	RefSeq	ILMN_199809	ILMN_247796	EG546638	XM_905852.3	XM_905852.3		546638	149266865	XM_905852.3	EG546638	XP_910945.3	ILMN_1260331	003290154	S	298	TGCGACCCCAACCCTGATGACCCACTCGTGCCAGAAATAGCCCACGCTTA				15qD1	PREDICTED: Mus musculus predicted gene, EG546638 (EG546638), mRNA.					
Mus musculus	RefSeq	ILMN_220272	ILMN_220272	CEACAM12	NM_026087.1	NM_026087.1		67315	13385587	NM_026087.1	Ceacam12	NP_080363.1	ILMN_2720002	003870504	S	929	GGCTTCAGGCAATCAACAACCACCACATCAACAAAGGATGTCGAAGAAAC	7	+	18657033-18657082	7qA2	Mus musculus CEA-related cell adhesion molecule 12 (Ceacam12), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		1600031J20Rik; MGC117634	1600031J20Rik; MGC117634
Mus musculus	MEEBO	ILMN_217253	ILMN_217253	6820443O06RIK	scl00319565.2_1	NM_176945.2			31342440	NM_176945.2	6820443O06Rik		ILMN_2680968	005900328	S	1733	CCTTCATGGTTTTGCAATAGCAGCATAAATGCTCACATCCTGTGTCACTG										
Mus musculus	MEEBO	ILMN_193392	ILMN_193392	RNF13	scl23172.13.4_66				6755337	NM_011883	Rnf13		ILMN_2496731	003140180	S	20	AAATATAATCAGAATGCTAAGACTTTTTATATGGCCTTGTATGATGAGAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_206195	ILMN_206195	B930088D18RIK	ri|B930088D18|PX00166N08|AK081106|2849					AK081106	B930088D18Rik		ILMN_1253101	005860239	S	2637	CTGGGGCTTGCCTGGGATTGGAGGTATAATGCAGCTGAAAGACTTCTGGG										
Mus musculus	RefSeq	ILMN_217842	ILMN_217842	ZDHHC24	NM_027476.1	NM_027476.1		70605	27229102	NM_027476.1	Zdhhc24	NP_081752.1	ILMN_2860580	006660487	S	1446	AGCCCTGCTAGGCCATGTGACAAGATTGCTGGTAGAAATGTAGACCTTAC	19	+	4884317-4884366	19qA	Mus musculus zinc finger, DHHC domain containing 24 (Zdhhc24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	5730496N17Rik; Leng4	5730496N17Rik; Leng4
Mus musculus	Riken	ILMN_207299	ILMN_207299	4432406L21RIK	ri|4432406L21|PX00637M15|AK076237|2472					AK076237	4432406L21Rik		ILMN_1257992	002000184	S	2012	GGTCGGGAGTTAGCAGTTTGCCAAGTTTATACGGCACAGGCTAGATGGGA										
Mus musculus	MEEBO	ILMN_191606	ILMN_191606	TRIM7	scl094089.3_150				16716452	NM_053166	Trim7		ILMN_1258293	002570072	S	1	AGAGTACTTTCACCCGAAAGATGCCCTTACCCCAGAGGTCACCCAGTACT						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223510	ILMN_223510	RAB20	NM_011227.1	NM_011227.1		19332	45593125	NM_011227.1	Rab20	NP_035357.1	ILMN_2764968	001340274	S	365	ACACCGAGGGCGGGGAGAAGGAAGGACCGGCCTCTGGCAAGGTGGGCAGC	8	-	11454284-11454333	8qA1.1	Mus musculus RAB20, member RAS oncogene family (Rab20), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D8Ertd350e; AA536966; MGC107554	D8Ertd350e; AA536966; MGC107554
Mus musculus	MEEBO	ILMN_189220	ILMN_189220	BC055368	scl46891.13_423				33942090	NM_183017	BC055368		ILMN_2459388	001740437	S	18	GCATTCTCTATGTTACCTCCTTGTTCTGGAGTGGGGATGAGAGGCCATAA										
Mus musculus	MEEBO	ILMN_189220	ILMN_189220	BC055368	scl46891.13_423				33942090	NM_183017	BC055368		ILMN_2660386	005490259	S	2959	CGGGTGGGACACTGTGGTGGCTGTTGTACTTGTGAAGGTAAAAGTGACCT										
Mus musculus	MEEBO	ILMN_185430	ILMN_185430	IDS	scl0002947.1_141				6754279	NM_010498	Ids		ILMN_2426983	003370719	S	7	AGCTCCATGACTTGGAAGAGGAGCCAGACTTGTTTGGTAATCCCCGGGAG						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of the 2-sulfate groups of the L-iduronate 2-sulfate units of dermatan sulfate, heparan sulfate and heparin [goid 4423] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISA]		
Mus musculus	MEEBO	ILMN_188764	ILMN_188764	C030032G21RIK	scl24001.1.1_40						C030032G21Rik		ILMN_2455507	005290682	S	20	GCTGTGAGGATGTTTAGTTGTGAGTTCATGATTCTCTGGTTGTAGTCTCC										
Mus musculus	MEEBO	ILMN_188405	ILMN_188405	PDZK8	scl00107368.1_141				51771639	XM_140761	Pdzk8		ILMN_2452400	002190086	S	3	CTGCCACAACAGGGAACTTAATGATGTTTGAAGAGAGCTCTTGTTGGAAG										
Mus musculus	RefSeq	ILMN_219931	ILMN_254774	MASP2	NM_001003893.2	NM_001003893.2		17175	90962989	NM_001003893.2	Masp2	NP_001003893.1	ILMN_1260242	004070487	S	2426	GTGGTTCCAGAATACCTTTTGGAAGGTAAGCGGAAAGCAGGTGTGTGACC	4|NT_039289.1	+	101948-101997	4qE2	Mus musculus mannan-binding lectin serine peptidase 2 (Masp2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MAp19; MASP-2	MAp19; MASP-2
Mus musculus	RefSeq	ILMN_254774	ILMN_254774	MASP2	NM_001003893.2	NM_001003893.2		17175	90962989	NM_001003893.2	Masp2	NP_001003893.1	ILMN_3027989	006520048	I	1109	GGCCGATGCCAGAGTGCAGCATTATTGATTGTGGCCCTCCTGATGACCTA	4|NT_039289.1	+	97286-97306:99141-99169	4qE2	Mus musculus mannan-binding lectin serine peptidase 2 (Masp2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MAp19; MASP-2	MAp19; MASP-2
Mus musculus	RefSeq	ILMN_254774	ILMN_254774	MASP2	NM_001003893.2	NM_001003893.2		17175	90962989	NM_001003893.2	Masp2	NP_001003893.1	ILMN_3101073	007510176	A	414	GAAGCCGTTCACAGGGTTTGAGGCCTTCTATGCAGCGGAGGATGTGGATG	4|NT_039289.1	+	90236-90276:90794-90802	4qE2	Mus musculus mannan-binding lectin serine peptidase 2 (Masp2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MAp19; MASP-2	MAp19; MASP-2
Mus musculus	RefSeq	ILMN_237526	ILMN_237526	9130206N08RIK	NM_001034895.2	NM_001034895.2		103406	141802279	NM_001034895.2	9130206N08Rik	NP_001030067.1	ILMN_3162029	002650273	S	2749	ATGCTCTGATGTGGCTGGAGGTGGAGGAGACCTCAGGTGATGGCCAGAGT	10	+	80705040-80705089	10qC1	Mus musculus RIKEN cDNA 9130206N08 gene (9130206N08Rik), mRNA. XM_916097 XM_924095				mKIAA1086; AW045600; 2010013I23Rik	mKIAA1086; AW045600; 2010013I23Rik
Mus musculus	RefSeq	ILMN_195294	ILMN_195294	ZYX	NM_011777.2	NM_011777.2		22793	124487367	NM_011777.2	Zyx	NP_035907.1	ILMN_2514292	004050400	S	2368	CTGGACACCCACCTTGCTCTGTGCTGCTAGGTTGTGGCCACAGCTAAGAT	6	+	42308324-42308373	6qB2.1	Mus musculus zyxin (Zyx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; An adherens junction which connects two cells to each other [goid 5913] [evidence ISO]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9530098H06Rik; R75157	9530098H06Rik; R75157
Mus musculus	Riken	ILMN_206103	ILMN_206103	1110054B14RIK	ri|1110054B14|ZA00008M05|AK027976|896					AK027976	1110054B14Rik		ILMN_1256422	005390037	S	726	CTGCCTCCGGACCTGGAATCAAAGGGATGCCATTTTAACGCCTTTGCTGC										
Mus musculus	RefSeq	ILMN_212858	ILMN_212858	KTN1	NM_008477.1	NM_008477.1		16709	6678649	NM_008477.1	Ktn1	NP_032503.1	ILMN_2890238	000160014	S	4109	GTCAGACACTGGACAGTTTTGTCTTTTCTAATCCTTGGTAGACTACTGAC	14	+	46658088-46658137	14qC1	Mus musculus kinectin 1 (Ktn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence TAS]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence TAS]		
Mus musculus	RefSeq	ILMN_212858	ILMN_212858	KTN1	NM_008477.1	NM_008477.1		16709	6678649	NM_008477.1	Ktn1	NP_032503.1	ILMN_2700222	004920187	S	3055	TGGGAAGCAATGGAAGCTTTGGCATCAACTGAAAAAATGCTGCAGGACAG	14	+	46638779-46638828	14qC1	Mus musculus kinectin 1 (Ktn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence TAS]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence TAS]		
Mus musculus	RefSeq	ILMN_196522	ILMN_196522	4930403C10RIK	XM_356034.1	XM_356034.1			38088580	XM_356034.1	4930403C10Rik		ILMN_1259642	003780543	S	1180	CAGCTCTCTGGCTCAAGTGATGGTGAAAATGAGGTGAGACCCCCCTGCTG										
Mus musculus	MEEBO	ILMN_191037	ILMN_191037	SCL0003381.1_13	scl0003381.1_13	AK053428.1			26095774	AK053428.1	scl0003381.1_13		ILMN_1223443	007650544	S	1	GATCCAGGGTCTGGTTTTAAGTTCTATGGTAGTCGTCCAAGGAGCCATTG										
Mus musculus	MEEBO	ILMN_184748	ILMN_184748	TCRB-V8.3	scl30140.2.156_56						Tcrb-V8.3		ILMN_2421246	004640093	S	19	CTTCCTCCTGCTGGAATTGGCTTCTCCCTCTCAGACATCTTTGTACTTCT										
Mus musculus	RefSeq	ILMN_218137	ILMN_218137	ATP5G3	NM_175015.2	NM_175015.2		228033	142348625	NM_175015.2	Atp5g3	NP_778180.1	ILMN_2692124	001580471	S	472	CCTTGTCTGAAGCTATGGGTCTCTTTTGTTTGATGGTTGCGTTCTTGATC	2	-	73746664-73746713	2qC3	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 3 (Atp5g3), nuclear gene encoding mitochondrial protein, mRNA.	All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	MGC124584; 6030447M23	MGC124584; 6030447M23
Mus musculus	RefSeq	ILMN_216126	ILMN_216126	CLIC6	NM_172469.3	NM_172469.3		209195	146149274	NM_172469.3	Clic6	NP_766057.1	ILMN_2667635	007040471	S	3581	CCACATCACTCTGCACCTCTGTAGGAGTCACCTTGTTAAGCTCTTGTGAC				16qC4	Mus musculus chloride intracellular channel 6 (Clic6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Neuronatin; AW045520; 5730466J16Rik; CLIC1L; AL022908	Neuronatin; AW045520; 5730466J16Rik; CLIC1L; AL022908
Mus musculus	Riken	ILMN_205310	ILMN_205310	A230102B06RIK	ri|A230102B06|PX00063I14|AK039142|1743					AK039142	A230102B06Rik		ILMN_2571600	004640435	S	1462	CAGGGCTTAGTCATGCTGATACCCTTAGGTTGGTCCCAGTGAAACCTTAC										
Mus musculus	RefSeq	ILMN_215988	ILMN_215988	NDUFA4	NM_010886.1	NM_010886.1		17992	33563265	NM_010886.1	Ndufa4	NP_035016.1	ILMN_2666061	003780398	S	147	TGGAGCAGGGGGTACTGGAGCAGCACTGTATGTGATGCGCTTGGCACTGT	6	-	11856035-11856084	6qA1	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4 (Ndufa4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		MLRQ	MLRQ
Mus musculus	RefSeq	ILMN_257350	ILMN_257350	WDR93	NM_001037927.1	NM_001037927.1		626359	83776568	NM_001037927.1	Wdr93	NP_001033016.1	ILMN_3160146	002190709	S	2134	TCTTAAAGAGGTGAGCACCCGGGACGCCATAGCTCCTGCTCAGGACACCA	7	+	86930685-86930698:86930699-86930734	7qD3	Mus musculus WD repeat domain 93 (Wdr93), mRNA.					
Mus musculus	MEEBO	ILMN_194889	ILMN_194889	ZFP536	scl31453.10_70				27369508	NM_172385	Zfp536		ILMN_1220357	004040022	S	10	CCATGTCTAGCACTTTGGCGCTGGTACAGTATCTTTTGTGCCCCCCAAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223424	ILMN_223424	1600027N09RIK	scl073247.26_162	XM_130743.3			38075439	XM_130743.3	1600027N09Rik		ILMN_2763938	003400653	S	1702	TAAACCTGTGATGTGTTTTTTTGAGCTGTTTTGTTTTAAGGTAACTACTG						A multisubunit complex that catalyzes the acetylation of histones H4 and H2A [goid 43189] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]			
Mus musculus	Riken	ILMN_206663	ILMN_206663	A430075I06RIK	ri|A430075I06|PX00137J01|AK079811|2912					AK079811	A430075I06Rik		ILMN_2581762	007210224	S	2782	TCCCAGTACCCATGTTGGTGACTTGACACTGCTTGTGGGTCAGACACCTC										
Mus musculus	RefSeq	ILMN_221532	ILMN_226015	9130209A04RIK	XM_922027.2	XM_922027.2		77668	94404871	XM_922027.2	9130209A04Rik	XP_927120.1	ILMN_2736838	007100379	S	271	CATGTTATTGCACGCGGAGGACTCACGGGTTATGGAGAGCTGAACAATGT				18qC	PREDICTED: Mus musculus RIKEN cDNA 9130209A04 gene (9130209A04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209679	ILMN_209679	NCKAP1	NM_016965.2	NM_016965.2		50884	118131112	NM_016965.2	Nckap1	NP_058661.1	ILMN_1220664	001660564	S	3175	CTGGCGCTTGCATCATCCAGTCTACTGAAAATTGGCCAAGAGACAGATAA	2	-	80342427-80342471:80346330-80346334	2qC3	Mus musculus NCK-associated protein 1 (Nckap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IDA]; Any process by which a protein is transported to, or maintained in, basal regions of the cell [goid 45175] [evidence IDA]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IMP]; The process by which the anatomical structures of the embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 10172] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The orderly movement of mesodermal cells from one site to another [goid 8078] [evidence IMP]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The specification of the anterior/posterior axis of the embryo by products of genes expressed in the zygote; exemplified in insects by the gap genes, pair rule genes and segment polarity gene cascade [goid 7354] [evidence IMP]; The process by which the anatomical structures of the foregut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48617] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of polarized actin-based cytoskeletal structures [goid 30950] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column [goid 30903] [evidence IMP]; The process by which the anatomical structures of the notochord are generated and organized. Morphogenesis pertains to the creation of form. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column [goid 48570] [evidence IMP]; The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube [goid 48339] [evidence IMP]; The process by which the anatomical structures of the paraxial mesoderm are generated and organized. Morphogenesis pertains to the creation of form [goid 48340] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]		Hem-2; mKIAA0587; C79304; mh19; H19; Nap1	Hem-2; mKIAA0587; C79304; mh19; H19; Nap1
Mus musculus	RefSeq	ILMN_197099	ILMN_197099	EG226604	XM_136368.7	XM_136368.7		226604	94364498	XM_136368.7	EG226604	XP_136368.5	ILMN_1243033	006550017	S	1328	CCTCCCCACAAGTGAGCTCCAGAGCCGATGGGTTGTGCATGTGTTCAAAG	1	-	168562866-168562866:168564871-168564919	1qH2.3	PREDICTED: Mus musculus predicted gene, EG226604 (EG226604), mRNA.			Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209092	ILMN_209092	1810031K17RIK	NM_026977.1	NM_026977.1		69171	29789184	NM_026977.1	1810031K17Rik	NP_081253.1	ILMN_2592449	007570133	S	2584	TCATCACTGGAAGAACCATCTTTGGTGTATGTGGACCTGTCGCCGGCTGC	1	-	75018528-75018577	1qC3	Mus musculus RIKEN cDNA 1810031K17 gene (1810031K17Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU043960	AU043960
Mus musculus	Riken	ILMN_205186	ILMN_205186	BCL7C	ri|C230096E12|PX00177O24|AK049064|4356					AK049064	Bcl7c		ILMN_1251663	007100544	S	4135	AGTGGGGAAGTTCAGTGCCTATGGCTACACTGTTGGGAGCAGGGAGAGCG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_196771	ILMN_196771	KLRA4	NM_010649.2	NM_010649.2		16635	118130091	NM_010649.2	Klra4	NP_034779.1	ILMN_3104704	004860356	A	394	GGAATCCCTCAACAGGGATCAAAACATACTGTGTGATAAAACCAGGACTG	6	-	130012060-130012109	6qF3	Mus musculus killer cell lectin-like receptor, subfamily A, member 4 (Klra4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ly49d; Klra32; Chok; ly49r<129>	Ly49d; Klra32; Chok; ly49r<129>
Mus musculus	RefSeq	ILMN_196771	ILMN_196771	KLRA4	NM_010649.2	NM_010649.2		16635	118130091	NM_010649.2	Klra4	NP_034779.1	ILMN_3031402	001470369	I	818	TGTGGGAAGAGATTGGACAAATTCCCTCATTGACTCTCCAGTGAGTGTTA	6	-	129994039-129994056:129994057-129994088	6qF3	Mus musculus killer cell lectin-like receptor, subfamily A, member 4 (Klra4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ly49d; Klra32; Chok; ly49r<129>	Ly49d; Klra32; Chok; ly49r<129>
Mus musculus	RefSeq	ILMN_216668	ILMN_216668	TMEM176A	NM_025326.2	NM_025326.2		66058	31560269	NM_025326.2	Tmem176a	NP_079602.3	ILMN_2795410	002320491	S	1605	CACCCCCACAGCACCACCACAACGGGGGAGGAAAGAAGAGAACCAAAATT	6	+	48776364-48776413	6qB2.3	Mus musculus transmembrane protein 176A (Tmem176a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU041743; Keg2; AU040201; 0610011I04Rik	AU041743; Keg2; AU040201; 0610011I04Rik
Mus musculus	RefSeq	ILMN_216668	ILMN_216668	TMEM176A	NM_025326.2	NM_025326.2		66058	31560269	NM_025326.2	Tmem176a	NP_079602.3	ILMN_2795412	003370021	S	1492	ACCAAAAGGCTACTTCGACCTCTTCACCTCTGCTTCCCATCTCAGAATCT	6	+	48776251-48776300	6qB2.3	Mus musculus transmembrane protein 176A (Tmem176a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU041743; Keg2; AU040201; 0610011I04Rik	AU041743; Keg2; AU040201; 0610011I04Rik
Mus musculus	MEEBO	ILMN_194955	ILMN_194955	DPEP2	scl34381.6_178				32880213	NM_176913	Dpep2		ILMN_2511213	001980458	S	5	GTTTGACCTGAAGCCATGGGGGTAACAGCACGGCCTTAACATTTTAGCCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain, in a reaction that requires a free N-terminal amino group, C-terminal carboxyl group or both [goid 8238] [evidence IDA]		
Mus musculus	MEEBO	ILMN_194955	ILMN_194955	DPEP2	scl34381.6_178				32880213	NM_176913	Dpep2		ILMN_2692315	006250148	S	1427	GTGTCTACATACCCAGTGCTCATAGAGGAGTTGCTGAGACGAGGCTGGAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain, in a reaction that requires a free N-terminal amino group, C-terminal carboxyl group or both [goid 8238] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223118	ILMN_223118	SHARPIN	NM_025340.1	NM_025340.1		106025	28076870	NM_025340.1	Sharpin	NP_079616.1	ILMN_1254001	004560521	S	1649	GGGGACAGAGATGCCAGTGTTAAACAACAGGGGCTACATACAAGCTAGTA	15	-	76177491-76177540	15qD3	Mus musculus SHANK-associated RH domain interacting protein (Sharpin), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The morphological and physiological alterations undergone by the nucleus during apoptosis [goid 30262] [evidence IMP]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RBCKL1; 0610041B22Rik; SIPL1; AW121341	RBCKL1; 0610041B22Rik; SIPL1; AW121341
Mus musculus	RefSeq	ILMN_219232	ILMN_219232	PCTP	NM_008796.2	NM_008796.2		18559	117320551	NM_008796.2	Pctp	NP_032822.2	ILMN_2705979	002230037	S	669	CGTGTCAGAACTACCACAAGAAAACCTAAGGAGGGGACTGGGACTCCGTC	11	-	89845983-89846004:89846005-89846032	11qC	Mus musculus phosphatidylcholine transfer protein (Pctp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	PC-TP	PC-TP
Mus musculus	RefSeq	ILMN_194888	ILMN_251896	S100PBP	NM_029036.2	NM_029036.2		74648	141801813	NM_029036.2	S100pbp	NP_083312.1	ILMN_1225923	000270446	S	1325	GAGTCAGTGGGTTGACAGAAACAAGCGGAGCCACCATCGGTTCCAGCGTC	4	-	128828240-128828289	4qD2.2	Mus musculus S100P binding protein (S100pbp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			4930429A08Rik; S100pbpr; AI851343	4930429A08Rik; S100pbpr; AI851343
Mus musculus	RefSeq	ILMN_199214	ILMN_231102	LOC670917	XM_983955.1	XM_983955.1		670917	94392033	XM_983955.1	LOC670917	XP_989049.1	ILMN_1228673	005490435	S	235	CCAGTTCGAGGGGCTCTACCACCCACTTCTCAACTCAGAGCACGAACATG					PREDICTED: Mus musculus hypothetical protein LOC670917 (LOC670917), mRNA.					
Mus musculus	RefSeq	ILMN_211174	ILMN_211174	SUCNR1	NM_032400.1	NM_032400.1		84112	14161703	NM_032400.1	Sucnr1	NP_115776.1	ILMN_1241789	001190148	S	1018	CAGGACATGAGCTGCTGGATGCAGGTCTTCACTCAGCCAAAATGAGACAC	3	+	59890937-59890986	3qD	Mus musculus succinate receptor 1 (Sucnr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpr91	Gpr91
Mus musculus	Riken	ILMN_201931	ILMN_201931	ERCC4	ri|8430401P11|PX00024D17|AK018375|1119					AK018375	Ercc4		ILMN_1242695	002350112	S	917	GGTGACTTAAAGTGGGGCTGCTTTGCCCACTGGGAAATAGTAAGTCGCAG						Any complex formed of proteins that act in nucleotide-excision repair [goid 109] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISO]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215543	ILMN_215543	BCKDHB	NM_199195.1	NM_199195.1		12040	40353219	NM_199195.1	Bckdhb	NP_954665.1	ILMN_2660803	003520148	S	1316	CGTGGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGGTGGTG	9	+	84017765-84017814	9qE2	Mus musculus branched chain ketoacid dehydrogenase E1, beta polypeptide (Bckdhb), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents [goid 9063] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: 3-methyl-2-oxobutanoate + lipoamide = S-(2-methylpropanoyl)dihydrolipoamide + CO2 [goid 3863] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA];  [goid 3826] [evidence IDA]		
Mus musculus	Riken	ILMN_204043	ILMN_204043	A830037N18RIK	ri|A830037N18|PX00155D13|AK043828|1210					AK043828	A830037N18Rik		ILMN_1242926	007510630	S	904	CAGAGAGCCTACAACTCAGCGTCTTGAAGCCAGGTTTCCACCTGTATCCC										
Mus musculus	MEEBO	ILMN_190890	ILMN_190890	A330044H09	scl52398.1.1_77						A330044H09		ILMN_2474167	004640301	S	9	GGATACTTGTACGTTTCCTAGGGAAGAGCTGGTGGGGGCGCACCTCATTC										
Mus musculus	MEEBO	ILMN_184625	ILMN_184625	SCL0001132.1_96	scl0001132.1_96	M16681.1			199473	M16681.1	scl0001132.1_96		ILMN_1259713	000670491	S	20	ACAGACCAAGATACAGGGACTAGAGTTGCTGAGCTACTTCCGCAGCAAGT										
Mus musculus	RefSeq	ILMN_211058	ILMN_211058	OLFR559	NM_147112.1	NM_147112.1		259116	22128740	NM_147112.1	Olfr559	NP_667323.1	ILMN_2811339	001050397	S	609	CCTATATGGACTCTATGTGGTTCTGTCCACAGTGGGTGTAGACTCCTTGC	7	-	109872344-109872393	7qE3	Mus musculus olfactory receptor 559 (Olfr559), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR11-1	MOR11-1
Mus musculus	RefSeq	ILMN_211058	ILMN_211058	OLFR559	NM_147112.1	NM_147112.1		259116	22128740	NM_147112.1	Olfr559	NP_667323.1	ILMN_2811336	006420279	S	908	CCAAGCCCATCAGGGGAGCCATGTTCAAAGTTCTGAGAGGAAAAGACTAG				7qE3	Mus musculus olfactory receptor 559 (Olfr559), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR11-1	MOR11-1
Mus musculus	RefSeq	ILMN_223396	ILMN_261152	4930405M20RIK	XM_912125.3	XM_912125.3		73942	149264566	XM_912125.3	4930405M20Rik	XP_917218.3	ILMN_2763480	007160551	S	782	GACATTTATTCCACTGAGGATTTACTTTACATTCGAGACTACTTTAATAA				13qC3	PREDICTED: Mus musculus RIKEN cDNA 4930405M20 gene (4930405M20Rik), mRNA.					
Mus musculus	Riken	ILMN_203373	ILMN_203373	9430079A18RIK	ri|9430079A18|PX00110F07|AK035048|1603					AK035048	9430079A18Rik		ILMN_2556813	004290441	S	1281	GATGGATCCCTGGAGCCCGTTGACCGAATAGCTTAGTGGGATAAATAAGG										
Mus musculus	RefSeq	ILMN_210747	ILMN_210747	5730403B10RIK	NM_025670.4	NM_025670.4		66626	146134930	NM_025670.4	5730403B10Rik	NP_079946.2	ILMN_1227252	007650022	S	3467	TACCTTTGTCTGGCTGAGCAGCATAAAAGGGGCATTTACGTATATCTCCC				16qA1	Mus musculus RIKEN cDNA 5730403B10 gene (5730403B10Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISO]; A series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor [goid 33209] [evidence ISO]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence ISO]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]		AW742692; 2700048O17Rik; AU018521	AW742692; 2700048O17Rik; AU018521
Mus musculus	RefSeq	ILMN_217724	ILMN_210747	5730403B10RIK	NM_025670.4	NM_025670.4		66626	146134930	NM_025670.4	5730403B10Rik	NP_079946.2	ILMN_1228258	005420475	S	3544	AGGATGGGCTCCCGGTACATGATGGGAAGGGAGATATACGTAAATGCCCC				16qA1	Mus musculus RIKEN cDNA 5730403B10 gene (5730403B10Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISO]; A series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor [goid 33209] [evidence ISO]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence ISO]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]		AW742692; 2700048O17Rik; AU018521	AW742692; 2700048O17Rik; AU018521
Mus musculus	RefSeq	ILMN_218785	ILMN_218785	4933436I01RIK	NM_025763.1	NM_025763.1		66780	13385231	NM_025763.1	4933436I01Rik	NP_080039.1	ILMN_2700177	003180400	S	831	GAGAGGATCACACATTTTGACCAAAATAAGGAAGTAGAGAGGAACACACA	X	-	65173584-65173633	XqA7.1	Mus musculus RIKEN cDNA 4933436I01 gene (4933436I01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218785	ILMN_218785	4933436I01RIK	NM_025763.1	NM_025763.1		66780	13385231	NM_025763.1	4933436I01Rik	NP_080039.1	ILMN_2940867	000070433	S	1306	ATACAGACATCAGCCAGCTATGACTAGACATCATGTTGTTTCGAAAGGCC	X	-	65173109-65173136:65173137-65173158	XqA7.1	Mus musculus RIKEN cDNA 4933436I01 gene (4933436I01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_234894	ILMN_234894	TIMM9	NM_001024853.1	NM_001024853.1		30056	67846108	NM_001024853.1	Timm9	NP_001020024.1	ILMN_3041906	003850730	I	163	TCTGTCTCTGCCTCCAGAGTGCTAAAGTCCAGAGTACTTTAGTCCTGAGG	12	-	72234893-72234942	12qC3	Mus musculus translocase of inner mitochondrial membrane 9 homolog (yeast) (Timm9), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Timm10; 2810011L15Rik; Tim10a	Timm10; 2810011L15Rik; Tim10a
Mus musculus	RefSeq	ILMN_234894	ILMN_234894	TIMM9	NM_001024853.1	NM_001024853.1		30056	67846108	NM_001024853.1	Timm9	NP_001020024.1	ILMN_3116614	004900463	A	657	GAACAAGGATTCACATGGTGGAGAATCCCCTGACACAGCAGGAGCCGTGG	12	-	72224433-72224482	12qC3	Mus musculus translocase of inner mitochondrial membrane 9 homolog (yeast) (Timm9), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Timm10; 2810011L15Rik; Tim10a	Timm10; 2810011L15Rik; Tim10a
Mus musculus	MEEBO	ILMN_187016	ILMN_187016	9030024J15RIK	scl41822.1.1_270						9030024J15Rik		ILMN_1241496	002450523	S	12	AACTTGCTGATTTTGTGGTGCTGTGTGGACCAATGAGCTGTATTCCCCAC										
Mus musculus	RefSeq	ILMN_216309	ILMN_216309	HPN	NM_008281.1	NM_008281.1		15451	6680266	NM_008281.1	Hpn	NP_032307.1	ILMN_2969532	000620471	S	1359	GCCAGGAGTGTACACCAAAGTCACTGACTTCCGGGAGTGGATCTTCAAGG	7	-	30807830-30807833:30807975-30808020	7qB1	Mus musculus hepsin (Hpn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	AI788568; AA408042	AI788568; AA408042
Mus musculus	MEEBO	ILMN_192391	ILMN_192391	ACTA2	scl52540.10_3				31982518	NM_007392	Acta2		ILMN_2710353	003130136	S	236	TGGGGGATGAAGCCCAGAGCAAGAGAGGGATCCTGACGCTGAAGTATCCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; A process, occurring in the vascular tissue, whereby actin/myosin complex activity generates force through ATP hydrolysis resulting in a change in smooth muscle geometry. This process is always coupled to chemo-mechanical energy conversion [goid 14829] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192391	ILMN_192391	ACTA2	scl52540.10_3				31982518	NM_007392	Acta2		ILMN_1237242	004540376	S	1	GGGTGTCCCCAAAAATGCAGTTACTTCCATAGACAGCTAAAGACTTGAAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; A process, occurring in the vascular tissue, whereby actin/myosin complex activity generates force through ATP hydrolysis resulting in a change in smooth muscle geometry. This process is always coupled to chemo-mechanical energy conversion [goid 14829] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218965	ILMN_218965	ADK	NM_134079.3	NM_134079.3		11534	146149178	NM_134079.3	Adk	NP_598840.1	ILMN_2702471	003780239	S	663	CCAGTTCTTCAAGGAAGCCTTGATGGACGTCATGCCTTATGTTGATATCC				14qA3	Mus musculus adenosine kinase (Adk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + adenosine = ADP + AMP [goid 4001] [evidence IDA]	AI255373; Ak; MGC6593; 5033405D03Rik; AI987814; 2310026J05Rik	AI255373; Ak; MGC6593; 5033405D03Rik; AI987814; 2310026J05Rik
Mus musculus	MEEBO	ILMN_191652	ILMN_191652	MMP24	scl20046.9_689				6754711	NM_010808	Mmp24		ILMN_1257978	006510670	S	1867	TCAAGAACAAGGCGGGTCCTCAGCCCGTCACCTACTATAAGCGGCCAGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	Riken	ILMN_205063	ILMN_205063	D230021E06RIK	ri|D230021E06|PX00188N14|AK051937|4132					AK051937	D230021E06Rik		ILMN_2569706	006280110	S	4024	GGCAGGCAGACAGAGACATGATCTACAGTGACAGAAAGAAGCGCCTCGCC										
Mus musculus	RefSeq	ILMN_257785	ILMN_257785	SPARC	NM_009242.1	NM_009242.1		20692	6678076	NM_009242.1	Sparc	NP_033268.1	ILMN_3059326	001260482	I	80	TCCCAGCATCATGAGGGCCTGGATCTTCTTTCTCCTTTGCCTGGCCGGGA	11	-	55253370-55253407:55253408-55253419	11qB1.3	Mus musculus secreted acidic cysteine rich glycoprotein (Sparc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	BM-40; AA517111	BM-40; AA517111
Mus musculus	RefSeq	ILMN_257785	ILMN_257785	SPARC	NM_009242.1	NM_009242.1		20692	6678076	NM_009242.1	Sparc	NP_033268.1	ILMN_3136561	005130148	A	1570	ACATGACAGACTCCCAGCAGCCCGGGACCTTGCTGTCTTCTCGACTCTTC	11	-	55238389-55238438	11qB1.3	Mus musculus secreted acidic cysteine rich glycoprotein (Sparc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	BM-40; AA517111	BM-40; AA517111
Mus musculus	RefSeq	ILMN_184886	ILMN_184886	VPS33B	NM_178070.2	NM_178070.2		233405	31342598	NM_178070.2	Vps33b	NP_835171.1	ILMN_2864844	000130040	S	2192	CCTGGCCAGTGCTGAAGTATTTCCTGATTGTGGATCCCAGTGAGATGCTG	7	+	80164716-80164765	7qD3	Mus musculus vacuolar protein sorting 33B (yeast) (Vps33b), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence ISA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]		MGC36556	MGC36556
Mus musculus	Riken	ILMN_204138	ILMN_204138	AEBP2	ri|B230313N05|PX00159L17|AK045838|2923					AK045838	Aebp2		ILMN_2562670	006350767	S	2700	ACTGCGGATGGGCACGCTCGCTCGGGAACGGTCGGCTAAGACGCTCTGTA						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IMP]		
Mus musculus	MEEBO	ILMN_185108	ILMN_185108	A430065P19RIK	scl20816.10_63				31340788	NM_177376	A430065P19Rik		ILMN_2424222	006980376	S	7	GGCTGTAGGGCTGCTTACAGAGGTATGGGCAGCTATACCACCAGAGAATA										
Mus musculus	RefSeq	ILMN_201136	ILMN_201136	LOC382029	XM_356101.1	XM_356101.1			38089381	XM_356101.1	LOC382029		ILMN_2541217	002360692	S	317	GGGGCCACGCTGGACCTCACTCCTCTAAATTGGTAATTCCTGATTCTCAG										
Mus musculus	Riken	ILMN_204554	ILMN_204554	B930008G09RIK	ri|B930008G09|PX00162L10|AK046968|2246					AK046968	B930008G09Rik		ILMN_1229449	000610079	S	2057	GGGTTGGAGACAGTTGAGAAGATAGGAGCCTGTACTGGGTAGTTGCCAGC										
Mus musculus	RefSeq	ILMN_248574	ILMN_248574	PAK6	NM_001033254.1	NM_001033254.1		214230	84781772	NM_001033254.1	Pak6	NP_001028426.1	ILMN_2905646	003190711	S	3529	CTACGGAACTGTGAATAGCCTGTGTGTAGACCATGAGAGCAGCCAGGGGG	2	+	118388579-118388628	2qE5	Mus musculus p21 (CDKN1A)-activated kinase 6 (Pak6), mRNA. XM_924943 XM_924947 XM_924951 XM_924953	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	4732456M09	4732456M09
Mus musculus	RefSeq	ILMN_199096	ILMN_225100	LOC546475	XR_003963.1	XR_003963.1		546475	94389227	XR_003963.1	LOC546475		ILMN_1227172	002570746	S	1289	GTGCTGAACTCATGGACAAACTCATGGATGTAAGGCAGCCCAATTCAGTG				10qB2	PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 7 (LOC546475), mRNA.					
Mus musculus	MEEBO	ILMN_220773	ILMN_220773	1110059M19RIK	scl54956.2.1_13	XM_135842.2			38086125	XM_135842.2	1110059M19Rik		ILMN_1231588	001340088	S	469	TCTCTGGAAGCCCTATGGCACTGATGATCGGAGGCCCAAGAGTTGGTAGC										
Mus musculus	MEEBO	ILMN_185165	ILMN_185165	PDGFA	scl25853.12_183				34328144	NM_008808	Pdgfa		ILMN_2424721	004150133	S	20	TTCGTCGATAACACGCACGAGGCTGCTGTAAGTTGGGACAGCGAGACGGT						Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IGI]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence ISO]		
Mus musculus	MEEBO	ILMN_223400	ILMN_223400	A830037N07RIK	scl26596.1_14	NM_177113.3			32129245	NM_177113.3	A830037N07Rik		ILMN_2763524	004590338	S	1734	ATCTTCTGTTGTAGAATAATAATAAAAAGACTATTAAGAGCAATAAATTA										
Mus musculus	Riken	ILMN_207126	ILMN_207126	SELPL	ri|F630032C22|PL00002A10|AK089188|1532					AK089188	Selpl		ILMN_2585233	003800070	S	1011	CACTTACCTGACAGCGGCCTGAAGAAAGGGCTGATTGTGACCCCTGGGAA										
Mus musculus	Riken	ILMN_205305	ILMN_205305	4833441J07RIK	ri|4833441J07|PX00313P01|AK029461|1788					AK029461	4833441J07Rik		ILMN_2571557	000510324	S	1361	CAAGGAGCGAGAAGGGCACAAGAGAATGTGACGTAGTGAGCCCTGTGGGC										
Mus musculus	RefSeq	ILMN_200179	ILMN_200179	LOC385649	XM_358844.1	XM_358844.1			38080818	XM_358844.1	LOC385649		ILMN_2537853	002490678	S	3362	CCCCACCCAACTGGAGACAGACATTCTAACTTCTAACAGCTCCAAGATGG										
Mus musculus	RefSeq	ILMN_193460	ILMN_253889	DLG4	NM_007864.2	NM_007864.2		13385	141803376	NM_007864.2	Dlg4	NP_031890.1	ILMN_2710764	001990669	S	2114	GTGCTTCTCAGCCATCGTAGAGGGCGACAGCTTTGAAGAGATCTATCACA	11	+	69852656-69852705	11qB3	Mus musculus discs, large homolog 4 (Drosophila) (Dlg4), mRNA.	An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus [goid 32281] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence ISO]; Loosely bound to the surface of the plasma membrane that faces the cytoplasm, but not integrated into the hydrophobic region [goid 31234] [evidence IDA]	The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant [goid 42220] [evidence NAS]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IDA]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence NAS]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SAP90A; SAP90; Dlgh4; PSD-95; PSD95	SAP90A; SAP90; Dlgh4; PSD-95; PSD95
Mus musculus	RefSeq	ILMN_219063	ILMN_219063	CCDC53	NM_026070.1	NM_026070.1		67282	21313033	NM_026070.1	Ccdc53	NP_080346.1	ILMN_2852067	006620259	S	721	TCCTTCAGTGACTAAGGGACTGGGGGAATCACACAGAACGTGGAAGAATG	10	+	87675626-87675639:87675640-87675675	10qC1	Mus musculus coiled-coil domain containing 53 (Ccdc53), mRNA.				2900091E11Rik; 5730495F03Rik	2900091E11Rik; 5730495F03Rik
Mus musculus	RefSeq	ILMN_211787	ILMN_211787	KLHL6	NM_183390.1	NM_183390.1		239743	34419627	NM_183390.1	Klhl6	NP_899246.1	ILMN_2619528	005490358	S	2180	AATAAATCCAGGTCTTTCCACGCCAGTCAGTGTGTCTCCCACCATACTGC	16	-	19946689-19946738	16qA3	Mus musculus kelch-like 6 (Drosophila) (Klhl6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC118659	MGC118659
Mus musculus	RefSeq	ILMN_211787	ILMN_211787	KLHL6	NM_183390.1	NM_183390.1		239743	34419627	NM_183390.1	Klhl6	NP_899246.1	ILMN_1260233	001780445	S	1027	CCCACTGACAGAGCATGAACTGGAGAGTGAGAATAAGAAGTGGGTGGAGT	16	-	19953585-19953634	16qA3	Mus musculus kelch-like 6 (Drosophila) (Klhl6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC118659	MGC118659
Mus musculus	RefSeq	ILMN_211787	ILMN_211787	KLHL6	NM_183390.1	NM_183390.1		239743	34419627	NM_183390.1	Klhl6	NP_899246.1	ILMN_2840514	006860040	S	2248	CAGGAAGCCAACCACAAATTCGGCTGGTGTCTCTGTCTGGCAAGTTTGCT	16	-	19946621-19946670	16qA3	Mus musculus kelch-like 6 (Drosophila) (Klhl6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC118659	MGC118659
Mus musculus	RefSeq	ILMN_186589	ILMN_238816	TAS2R116	NM_053212.1	NM_053212.1		112408	70778748	NM_053212.1	Tas2r116	NP_444442.1	ILMN_2436799	007050041	S	723	CATTTTCTTCCTGTCTCATGTTATGAAGGTTTGGAGTGCTCTGCTTCTGG	6	+	132806178-132806227	6qG1	Mus musculus taste receptor, type 2, member 116 (Tas2r116), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mt2r56; Tas2r16; TRB1; Tas2r7; mGR16; Tas2r14; T2R16; TRB4	mt2r56; Tas2r16; TRB1; Tas2r7; mGR16; Tas2r14; T2R16; TRB4
Mus musculus	RefSeq	ILMN_238816	ILMN_238816	TAS2R116	NM_053212.1	NM_053212.1		112408	70778748	NM_053212.1	Tas2r116	NP_444442.1	ILMN_2938373	000110204	S	637	CACAGTGCCCATGGATGCAGAGATGCCAGCACTAAGGCCCACATCAGAGC	6	+	132806092-132806141	6qG1	Mus musculus taste receptor, type 2, member 116 (Tas2r116), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mt2r56; Tas2r16; TRB1; Tas2r7; mGR16; Tas2r14; T2R16; TRB4	mt2r56; Tas2r16; TRB1; Tas2r7; mGR16; Tas2r14; T2R16; TRB4
Mus musculus	RefSeq	ILMN_210216	ILMN_210216	GNB5	NM_010313.1	NM_010313.1		14697	6754017	NM_010313.1	Gnb5	NP_034443.1	ILMN_1246507	002320427	S	50	GCTTCAAACAAAGGGCCCTAAGACCCGTTTTCAAGAAATCTCAACAACTC	9	+	75159251-75159300	9qD	Mus musculus guanine nucleotide binding protein (G protein), beta 5 (Gnb5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gbeta5; GBS; flr	Gbeta5; GBS; flr
Mus musculus	RefSeq	ILMN_210216	ILMN_210216	GNB5	NM_010313.1	NM_010313.1		14697	6754017	NM_010313.1	Gnb5	NP_034443.1	ILMN_2672458	006760750	S	1107	CGTCAGCACTCTGCGAGTGTCTCCTGATGGGACAGCATTCTGCTCGGGAT	9	+	75192385-75192434	9qD	Mus musculus guanine nucleotide binding protein (G protein), beta 5 (Gnb5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gbeta5; GBS; flr	Gbeta5; GBS; flr
Mus musculus	Riken	ILMN_207033	ILMN_207033	MCF2L	ri|C330042E05|PX00667H23|AK082849|952					AK082849	Mcf2l		ILMN_1256923	001170360	S	817	GGACACAGGCTGGGCACACATAACTCTGAGCCTTGAGGAAGACTTGGACC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197747	ILMN_197747	LOC229152	XM_143141.3	XM_143141.3			38077777	XM_143141.3	LOC229152		ILMN_1240991	007050008	S	1611	CGGCACCAGCACAGATCGTGGGTTTCTGGCAGCGGCAAGGATTGCTGATT										
Mus musculus	RefSeq	ILMN_196710	ILMN_196710	KLK1B11	NM_010640.1	NM_010640.1		16613	28875779	NM_010640.1	Klk1b11	NP_034770.1	ILMN_2632912	001780762	S	320	CCCTGACTACAACATGAGCCTCCTCATAATCCACAACCCAGAACCTGAGG	7	+	51254234-51254283	7qB4	Mus musculus kallikrein 1-related peptidase b11 (Klk1b11), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Klk11; mGK-11	Klk11; mGK-11
Mus musculus	RefSeq	ILMN_196710	ILMN_196710	KLK1B11	NM_010640.1	NM_010640.1		16613	28875779	NM_010640.1	Klk1b11	NP_034770.1	ILMN_2979432	007550519	S	714	GGCCCTATCCCATGTGGCAAACCCAATACGCCGGGAGTCTACACAAAACT	7	+	51255098-51255147	7qB4	Mus musculus kallikrein 1-related peptidase b11 (Klk1b11), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Klk11; mGK-11	Klk11; mGK-11
Mus musculus	MEEBO	ILMN_213466	ILMN_213466	1810047O18RIK	scl075598.2_105				51771637	XM_488881	1810047O18Rik		ILMN_2637272	001070154	S	187	GCCAGGTACAAGCCATGATAAGGATGAGGAGTCAAGTGGGTTTAATGGAG										
Mus musculus	MEEBO	ILMN_192469	ILMN_192469	SKI	scl23441.8_64				21322225	NM_011385	Ski		ILMN_2718435	001940689	S	1805	CACAGAGGCCAAGCGCAATTTGAGGAAAGAGATTGAGCGGCTCCGAGCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IDA]	The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205393	ILMN_205393	SLIT2	ri|E030026O16|PX00205D07|AK053182|3350					AK053182	Slit2		ILMN_1235829	001070392	S	3186	CTGTTTGGGGATGTGTAGGCTGTGGTTGTGTTGCTTCAGGAAAAGCCTGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]		
Mus musculus	Riken	ILMN_206368	ILMN_206368	MIL1-PENDING	ri|4930413J11|PX00313N04|AK076684|1780					AK076684	Mil1-pending		ILMN_1219513	001110376	S	1430	ACTGGGGCAGACAGTTGGCACTCTGTGGACCCTGACTCCTGAACACATAG										
Mus musculus	RefSeq	ILMN_216890	ILMN_244012	ALMS1	NM_145223.2	NM_145223.2		236266	153791437	NM_145223.2	Alms1	NP_660258.2	ILMN_2676533	004780341	S	9576	TACTTGTCCAGGAGAGGAAGCTCCAGAGCCTGTTCCAGAGTGAGCGGGAG				6qC3	Mus musculus Alstrom syndrome 1 homolog (human) (Alms1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]	Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A cellular homeostatic process involved in the maintenance of an internal equilibrium of glucose within a cell or between a cell and its external environment [goid 1678] [evidence ISO]; Any process that modulates the frequency, rate or extent of adipocyte differentiation [goid 45598] [evidence IMP]; Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light [goid 46548] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	bbb	bbb
Mus musculus	RefSeq	ILMN_196493	ILMN_244012	ALMS1	NM_145223.2	NM_145223.2		236266	153791437	NM_145223.2	Alms1	NP_660258.2	ILMN_1239446	007510768	S	7427	GCCCCAGACTTTCCACCTCAAATGCTAGGCACAAGAGACGATGACCTCTC				6qC3	Mus musculus Alstrom syndrome 1 homolog (human) (Alms1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]	Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A cellular homeostatic process involved in the maintenance of an internal equilibrium of glucose within a cell or between a cell and its external environment [goid 1678] [evidence ISO]; Any process that modulates the frequency, rate or extent of adipocyte differentiation [goid 45598] [evidence IMP]; Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light [goid 46548] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	bbb	bbb
Mus musculus	Riken	ILMN_206885	ILMN_206885	IL18R1	ri|E030029C19|PX00205F04|AK087129|1654					AK087129	Il18r1		ILMN_1255514	004040348	S	1301	CTGCTGTGACAGGGGCACCCTAGCTCATGTTTTTGTGCCTGCACCCAGCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213639	ILMN_213639	CYP3A13	NM_007819.3	NM_007819.3		13113	142380509	NM_007819.3	Cyp3a13	NP_031845.1	ILMN_2693314	004250465	S	333	CGGTCGACAGCCTGTGCTGGCTATCACAGATCCAGACATAATCAAAACAG	5	-	138360290-138360320:138362643-138362661	5qG2	Mus musculus cytochrome P450, family 3, subfamily a, polypeptide 13 (Cyp3a13), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	IIIAm2	IIIAm2
Mus musculus	RefSeq	ILMN_213639	ILMN_213639	CYP3A13	NM_007819.3	NM_007819.3		13113	142380509	NM_007819.3	Cyp3a13	NP_031845.1	ILMN_2700627	001570164	S	1382	GCATCAATCCTTACATGTACCTGCCCTTTGGGAGTGGACCAAGGAACTGC	5	-	138351232-138351262:138351144-138351162	5qG2	Mus musculus cytochrome P450, family 3, subfamily a, polypeptide 13 (Cyp3a13), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	IIIAm2	IIIAm2
Mus musculus	RefSeq	ILMN_213639	ILMN_213639	CYP3A13	NM_007819.3	NM_007819.3		13113	142380509	NM_007819.3	Cyp3a13	NP_031845.1	ILMN_2639214	005570368	S	1824	GGTTCTTGTGGGGCTGCCGATGTTCACTTCATTGTTACTACTAAATACCC	5	-	138346795-138346795:138346758-138346806	5qG2	Mus musculus cytochrome P450, family 3, subfamily a, polypeptide 13 (Cyp3a13), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	IIIAm2	IIIAm2
Mus musculus	RefSeq	ILMN_188607	ILMN_210881	MRPL19	NM_026490.2	NM_026490.2		56284	70608147	NM_026490.2	Mrpl19	NP_080766.1	ILMN_2454139	001570446	S	3983	TAATTAAGGTAGTCTGAGGCAAGGTGATTAAGAAATTATGAACTTTTCTC	6	-	81908803-81908852	6qC3	Mus musculus mitochondrial ribosomal protein L19 (Mrpl19), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence ISS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	RLX1; MRP-L15; 9030416F12Rik; Rpml15; D6Ertd157e; 9130412E02Rik	RLX1; MRP-L15; 9030416F12Rik; Rpml15; D6Ertd157e; 9130412E02Rik
Mus musculus	RefSeq	ILMN_197528	ILMN_197528	LOC195300	XM_111564.2	XM_111564.2			25030167	XM_111564.2	LOC195300		ILMN_1242742	003420731	S	273	CCTATTCATCGCCAGAGCTCAGCCTGGAGACGCAGGCATCTACTTCTGTA										
Mus musculus	MEEBO	ILMN_191711	ILMN_191711	NIBAN	scl17373.14_282				11528503	NM_022018	Niban		ILMN_2591029	004760243	S	3131	ACTTGAAGGCATTCTAATCAAGCACGTGAAGGACTCCAGCCACACCACCC										
Mus musculus	RefSeq	ILMN_184690	ILMN_184690	TMEM17	NM_153596.1	NM_153596.1		103765	23956401	NM_153596.1	Tmem17	NP_705824.1	ILMN_2907721	000130703	S	978	CTGCAGCTGAGGGGATATTCCTGATGTTGGATGAGTCTGTTGGCAGTTTC	11	+	22418842-22418891	11qA3.2	Mus musculus transmembrane protein 17 (Tmem17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW049890; RP23-401L13.4; MGC40971; AI503894	AW049890; RP23-401L13.4; MGC40971; AI503894
Mus musculus	RefSeq	ILMN_201170	ILMN_201170	LOC384887	XM_357918.1	XM_357918.1			38089613	XM_357918.1	LOC384887		ILMN_2541335	003780615	S	259	GGGACTGCATCTCTGCGAAGCAACCCCAAGCGGGGCTTCTATATCAGGTA										
Mus musculus	RefSeq	ILMN_222636	ILMN_222636	SLC35E1	NM_177766.2	NM_177766.2		270066	31343073	NM_177766.2	Slc35e1	NP_808434.1	ILMN_2752618	003390435	S	2927	CTGGTTTGCAGAAGAAGTCCCTTGGTAAGGCCGTCTGTTGGGTTCTCCTC	8	-	75005694-75005743	8qB3.3	Mus musculus solute carrier family 35, member E1 (Slc35e1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		6030458H05; AA408278	6030458H05; AA408278
Mus musculus	MEEBO	ILMN_218099	ILMN_218099	D11ERTD636E	scl0001282.1_55				21536223	NM_026682	D11Ertd636e		ILMN_2774260	001260743	S	64	CACGTTCGCCTTTGAGCTGGATGTGGAATCGCAGAAGGGCACTGGGCTAC										
Mus musculus	RefSeq	ILMN_184566	ILMN_184566	V1RI10	NM_134245.1	NM_134245.1		171279	21717788	NM_134245.1	V1ri10	NP_599006.1	ILMN_2419707	001470367	S	341	CCAGGACCACACTGTGGAGAAAACTCAAACAGCATATTCTTGCCTTTCTC	13	+	23191358-23191407	13qA3.1	Mus musculus vomeronasal 1 receptor, I10 (V1ri10), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_184566	ILMN_184566	V1RI10	NM_134245.1	NM_134245.1		171279	21717788	NM_134245.1	V1ri10	NP_599006.1	ILMN_2934639	004220064	S	847	ATCCTGATTATCTGGGATGTCCATATTGCTAAGATCTGCAGTGTCTCCTG	13	+	23191864-23191913	13qA3.1	Mus musculus vomeronasal 1 receptor, I10 (V1ri10), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_218399	ILMN_218399	MRPS35	NM_145573.2	NM_145573.2		232536	148235700	NM_145573.2	Mrps35	NP_663548.2	ILMN_1258993	004590128	S	741	GTAAGACCGAGGAAGACATGGACGAGTATGTGTGGGCAAAGAGCTCCTCG				6qG3	Mus musculus mitochondrial ribosomal protein S35 (Mrps35), nuclear gene encoding mitochondrial protein, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			MGC28446; MRPS28; MRP-S28; MDSO23	MGC28446; MRPS28; MRP-S28; MDSO23
Mus musculus	RefSeq	ILMN_218926	ILMN_218926	MFAP1A	NM_026220.4	NM_026220.4		67532	141802646	NM_026220.4	Mfap1a	NP_080496.1	ILMN_2702044	004780220	S	2309	ACCTTGTCTCAAAAAATAAAGAGTTCAGTCATCAATCTACATAGTTCAGG	2	-	121319477-121319526	2qE5	Mus musculus microfibrillar-associated protein 1A (Mfap1a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4432409M24Rik; Mfap1	4432409M24Rik; Mfap1
Mus musculus	RefSeq	ILMN_223147	ILMN_223147	SCNN1G	NM_011326.2	NM_011326.2		20278	118130196	NM_011326.2	Scnn1g	NP_035456.1	ILMN_2759914	007100255	S	2721	CTAAGCACTTACTCTAGGGCATAACAAACACCAGCCTACAGGCCCAATCC	7	+	128911747-128911796	7qF2	Mus musculus sodium channel, nonvoltage-gated 1 gamma (Scnn1g), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 15280] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	[g]ENaC	[g]ENaC
Mus musculus	RefSeq	ILMN_255742	ILMN_255742	EG436523	NM_001038997.1	NM_001038997.1		436523	84781767	NM_001038997.1	EG436523	NP_001034086.1	ILMN_2829699	003170093	S	489	ACTGCTGCCTCAGGCTGACTGTGAAGCCTCCTATCCTGGGAAGATCACTG	6	+	41345798-41345847	6qB1	Mus musculus predicted gene, EG436523 (EG436523), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190600	ILMN_190600	C030019G06RIK	scl33634.1_646						C030019G06Rik		ILMN_2471587	001240102	S	4	GAGCCTAGTGCCTCTGTACTTGATCTGTGATTGGCTGGCCATTTGTTAAC										
Mus musculus	RefSeq	ILMN_213833	ILMN_213833	D19BWG1357E	NM_177474.4	NM_177474.4		52874	142377658	NM_177474.4	D19Bwg1357e	NP_803425.1	ILMN_1220305	006980189	S	2018	GAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCATGC	19	-	27464586-27464635	19qC1	Mus musculus DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed (D19Bwg1357e), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA0020; AA675048; 1110069H02Rik	KIAA0020; AA675048; 1110069H02Rik
Mus musculus	RefSeq	ILMN_194379	ILMN_235261	LOC674146	XM_976367.1	XM_976367.1		674146	94393682	XM_976367.1	LOC674146	XP_981461.1	ILMN_1232729	006370132	S	181	GGAAAGGGTTTAAAGTGGATGGGCTGGAAATACACCAACACTGGAGAGCC					PREDICTED: Mus musculus similar to Ig heavy chain V region VH558 A1/A4 precursor (LOC674146), mRNA.					
Mus musculus	RefSeq	ILMN_211860	ILMN_211860	CYP4F13	NM_130882.1	NM_130882.1		170716	20373154	NM_130882.1	Cyp4f13	NP_570952.1	ILMN_3006911	000510669	S	1626	CACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTC	17	-	33061668-33061717	17qB1	Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 13 (Cyp4f13), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	0610030I10Rik; Cypf13	0610030I10Rik; Cypf13
Mus musculus	RefSeq	ILMN_198431	ILMN_198431	LOC381221	XM_355160.1	XM_355160.1			38085084	XM_355160.1	LOC381221		ILMN_2531660	005550609	S	633	GGCTCGCTGTCTTGTGGATGAATTGAGGAAAACCAAAGGTGAACCCTGTG										
Mus musculus	RefSeq	ILMN_202012	ILMN_232837	STX8	XM_001002450.1	XM_001002450.1		55943	94390479	XM_001002450.1	Stx8	XP_001002450.1	ILMN_1255118	002680678	S	1398	TGGGTCCTCTGCAAGAGCAGCATAGGATTACAACCACTGAGCCATCTCTC				11qB3	PREDICTED: Mus musculus syntaxin 8, transcript variant 3 (Stx8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222424	ILMN_222424	OLFR206	NM_146991.1	NM_146991.1		258993	22128954	NM_146991.1	Olfr206	NP_667202.1	ILMN_1260227	001500349	S	543	GCAACTGTATACAATTTCTTGCACAGATCCATCTCTTAACACATTGGTCG	16	-	59344933-59344982	16qC1.3	Mus musculus olfactory receptor 206 (Olfr206), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR182-4	MOR182-4
Mus musculus	RefSeq	ILMN_189032	ILMN_225796	CENTD1	XM_001001363.1	XM_001001363.1		212285	94374468	XM_001001363.1	Centd1	XP_001001363.1	ILMN_2457752	005490678	S	2622	TTTGGGCTGGAAACCTTCAAAAAGACGAAGAATTACAGGTGGATTCCCCA				5qC3.1	PREDICTED: Mus musculus centaurin, delta 1, transcript variant 5 (Centd1), mRNA.					
Mus musculus	RefSeq	ILMN_203871	ILMN_225796	CENTD1	XM_001001363.1	XM_001001363.1		212285	94374468	XM_001001363.1	Centd1	XP_001001363.1	ILMN_2560602	003450196	S	98	CTTCGGGACGCGTGGAGTGCTCGGGCGGCTCTGGATTGTGTCGCTCGGAT				5qC3.1	PREDICTED: Mus musculus centaurin, delta 1, transcript variant 5 (Centd1), mRNA.					
Mus musculus	RefSeq	ILMN_214327	ILMN_225796	CENTD1	XM_001001363.1	XM_001001363.1		212285	94374468	XM_001001363.1	Centd1	XP_001001363.1	ILMN_2646891	001510753	S	7116	GCATACCTTACTGGAATTCCTCCTGAGAGTTGAGTGTAAAAACTGCTCCC				5qC3.1	PREDICTED: Mus musculus centaurin, delta 1, transcript variant 5 (Centd1), mRNA.					
Mus musculus	MEEBO	ILMN_189059	ILMN_189059	PRPF4B	scl44916.15_83				23956073	NM_013830	Prpf4b		ILMN_2457995	004220369	S	17	TAATTTTTCCATGTCAGTGTTGAATACAGTTGACTAACATTTGGGATTTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISS]		
Mus musculus	RefSeq	ILMN_197430	ILMN_250919	RYR3	NM_177652.2	NM_177652.2		20192	125628626	NM_177652.2	Ryr3	NP_808320.2	ILMN_1225525	006380593	S	9702	CCCCACCCTGGAGAAGCTAAAGAAGAAGGCGGTGAAGACTGTGCAGGAGG	2	-	112549359-112549408	2qE3	Mus musculus ryanodine receptor 3 (Ryr3), mRNA.	Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules) [goid 30314] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI851294; C230090H21	AI851294; C230090H21
Mus musculus	RefSeq	ILMN_250919	ILMN_250919	RYR3	NM_177652.2	NM_177652.2		20192	125628626	NM_177652.2	Ryr3	NP_808320.2	ILMN_3150366	003360646	A	14616	CTTCCCAGCTGGAGACTGCTTTCGGAAGCAATATGAAGATCAGCTCGGGT	2	-	112472281-112472330	2qE3	Mus musculus ryanodine receptor 3 (Ryr3), mRNA.	Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules) [goid 30314] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI851294; C230090H21	AI851294; C230090H21
Mus musculus	RefSeq	ILMN_220141	ILMN_220141	DOLPP1	NM_020329.1	NM_020329.1		57170	9966769	NM_020329.1	Dolpp1	NP_065062.1	ILMN_2966370	005670167	S	1669	AACCAGTGCAGGTTGATCCTGGGGTCTGCCTGGGAGTGGGCTCTGATCCC	2	+	30222118-30222167	2qB	Mus musculus dolichyl pyrophosphate phosphatase 1 (Dolpp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: dolichyl diphosphate + H2O = dolichyl phosphate + phosphate [goid 47874] [evidence IDA]	AB030189; LSFR2; 0610011H20Rik	AB030189; LSFR2; 0610011H20Rik
Mus musculus	RefSeq	ILMN_197691	ILMN_197691	LOC229430	XM_143354.2	XM_143354.2			38077418	XM_143354.2	LOC229430		ILMN_1240172	002760424	S	769	GCCCCACTCCTCATCACACAGTGCACAAATGACGGATATGGTGTACCTGC										
Mus musculus	RefSeq	ILMN_187191	ILMN_187191	TLX2	NM_009392.2	NM_009392.2		21909	70912930	NM_009392.2	Tlx2	NP_033418.1	ILMN_2451202	000360324	S	956	AGACAACAAGGTGGCTTCGGTGTCCGGGCTCGCCTCGGTGGTGTGACCGA	6	-	83018747-83018751:83018752-83018796	6qC3	Mus musculus T-cell leukemia, homeobox 2 (Tlx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation [goid 48484] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of dendrite morphogenesis [goid 50774] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Ncx1; Tlx1l2; Hox11l1; Tlx1l1; NCX; Enx; Hox11L.1	Ncx1; Tlx1l2; Hox11l1; Tlx1l1; NCX; Enx; Hox11L.1
Mus musculus	RefSeq	ILMN_187191	ILMN_187191	TLX2	NM_009392.2	NM_009392.2		21909	70912930	NM_009392.2	Tlx2	NP_033418.1	ILMN_1258230	000990162	S	283	AAAGTGCGGCGTTTTCCAGTGGATTCCACGGAGCCTCGGGCTATGCTCCA	6	-	83019887-83019936	6qC3	Mus musculus T-cell leukemia, homeobox 2 (Tlx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation [goid 48484] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of dendrite morphogenesis [goid 50774] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Ncx1; Tlx1l2; Hox11l1; Tlx1l1; NCX; Enx; Hox11L.1	Ncx1; Tlx1l2; Hox11l1; Tlx1l1; NCX; Enx; Hox11L.1
Mus musculus	RefSeq	ILMN_198866	ILMN_198866	LOC244417	XM_146277.4	XM_146277.4			38089187	XM_146277.4	LOC244417		ILMN_2533196	001430730	S	5388	ATGTCGATGCCTGGTGGAATATGGCGGAGAGTTCTGCCAAGAAGCAGCGC										
Mus musculus	RefSeq	ILMN_214436	ILMN_214436	OLFR168	NM_146357.1	NM_146357.1		258354	22129588	NM_146357.1	Olfr168	NP_666469.1	ILMN_3005521	007040431	S	815	TTCTGACTGTTTTCTACACTATCCTTACCCCCATGCTCAACCCCATCATC	16	-	19530147-19530196	16qA3	Mus musculus olfactory receptor 168 (Olfr168), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC157521; MOR271-1	MGC157521; MOR271-1
Mus musculus	RefSeq	ILMN_214436	ILMN_214436	OLFR168	NM_146357.1	NM_146357.1		258354	22129588	NM_146357.1	Olfr168	NP_666469.1	ILMN_1241782	005670706	S	65	CTGGCCTACTACTTATGATGCTCATCATACTTGTCTTCTTTCTGGCCTTG	16	-	19530897-19530946	16qA3	Mus musculus olfactory receptor 168 (Olfr168), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC157521; MOR271-1	MGC157521; MOR271-1
Mus musculus	MEEBO	ILMN_186843	ILMN_186843	2900054C01RIK	scl53648.1.1_147						2900054C01Rik		ILMN_2438962	005420364	S	15	CACTGACTGATGTGACTGCCGGGCTTTCCCAATCTTGAGCACTGTGGTCC										
Mus musculus	Riken	ILMN_204329	ILMN_204329	3230401L03RIK	ri|6030429O15|PX00056J05|AK031423|2284					AK031423	3230401L03Rik		ILMN_1256057	005340025	S	1938	TCTGGGTGCCTTAGGTGGTAGATCATTTCTAGTCCCTAGTTGCCAATGGG										
Mus musculus	RefSeq	ILMN_223456	ILMN_223456	SETD3	NM_028262.2	NM_028262.2		52690	141802818	NM_028262.2	Setd3	NP_082538.1	ILMN_2764335	000540634	S	2357	AGAATATCCCCAGTACCAAAAGAAAAGGTGAGGTGGCAACCTGATTTCTA	12	-	109344938-109344987	12qF1	Mus musculus SET domain containing 3 (Setd3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2610305M23Rik; D12Ertd771e	2610305M23Rik; D12Ertd771e
Mus musculus	RefSeq	ILMN_223456	ILMN_223456	SETD3	NM_028262.2	NM_028262.2		52690	141802818	NM_028262.2	Setd3	NP_082538.1	ILMN_1240860	006960541	S	2391	GGCAACCTGATTTCTAATGGCTTAAAATGTTGATGATGATCCTAATTACA	12	-	109344904-109344953	12qF1	Mus musculus SET domain containing 3 (Setd3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2610305M23Rik; D12Ertd771e	2610305M23Rik; D12Ertd771e
Mus musculus	RefSeq	ILMN_203830	ILMN_225443	TMTC4	NM_028651.2	NM_028651.2		70551	142345158	NM_028651.2	Tmtc4	NP_082927.1	ILMN_1226460	001300114	S	707	GTCAAGCATTTAAAGAAACAGGTAACAAGGAGGGAACACATTCTTCCACC	14	-	123349782-123349814:123362520-123362536	14qE5	Mus musculus transmembrane and tetratricopeptide repeat containing 4 (Tmtc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930403J22Rik; 5730419O14Rik	4930403J22Rik; 5730419O14Rik
Mus musculus	RefSeq	ILMN_203185	ILMN_225443	TMTC4	NM_028651.2	NM_028651.2		70551	142345158	NM_028651.2	Tmtc4	NP_082927.1	ILMN_1246478	004490520	S	2500	CATGCAAAAAGATTATAGCACCAGCAATACACTCTTGAATGCTTGATAGG	14	-	123319037-123319086	14qE5	Mus musculus transmembrane and tetratricopeptide repeat containing 4 (Tmtc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930403J22Rik; 5730419O14Rik	4930403J22Rik; 5730419O14Rik
Mus musculus	RefSeq	ILMN_202228	ILMN_225443	TMTC4	NM_028651.2	NM_028651.2		70551	142345158	NM_028651.2	Tmtc4	NP_082927.1	ILMN_1243217	001340253	S	2372	CTTCCCCCTAATGTTTTGAGTTTGTGAGTGTGTGCATGAAGCCTCTGTTC	14	-	123319165-123319214	14qE5	Mus musculus transmembrane and tetratricopeptide repeat containing 4 (Tmtc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930403J22Rik; 5730419O14Rik	4930403J22Rik; 5730419O14Rik
Mus musculus	RefSeq	ILMN_192498	ILMN_225443	TMTC4	NM_028651.2	NM_028651.2		70551	142345158	NM_028651.2	Tmtc4	NP_082927.1	ILMN_1216099	000070707	S	3143	GTGGGTTTCCATCTCACATGATAAAATCACAGACATTACTCTATCCAGAA	14	-	123318394-123318443	14qE5	Mus musculus transmembrane and tetratricopeptide repeat containing 4 (Tmtc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930403J22Rik; 5730419O14Rik	4930403J22Rik; 5730419O14Rik
Mus musculus	RefSeq	ILMN_216311	ILMN_216311	OXCT2B	NM_181859.2	NM_181859.2		353371	142372607	NM_181859.2	Oxct2b	NP_862907.1	ILMN_1212939	005490639	S	1672	CCTCCGCCTTCCTTCTGCTAGATGGTGTCTAGTGAGAGCCATGTGACCTT	4	+	122795173-122795222	4qD2.2	Mus musculus 3-oxoacid CoA transferase 2B (Oxct2b), mRNA.	A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Scot-t2; MGC130507	Scot-t2; MGC130507
Mus musculus	RefSeq	ILMN_210114	ILMN_319900	LOC100046049	XM_001476363.1	XM_001476363.1		100046049	149262282	XM_001476363.1	LOC100046049	XP_001476413.1	ILMN_1254911	001340630	S	478	CAGTGAGGGCCCCACAGCCAATTCCTAGAGACCTAGAGACCCATTCTCTA					PREDICTED: Mus musculus hypothetical protein LOC100046049 (LOC100046049), mRNA.					
Mus musculus	RefSeq	ILMN_211916	ILMN_259058	AUTS2	XM_001052036.1	XM_001052036.1		319974	94375178	XM_001052036.1	Auts2	XP_001052036.1	ILMN_2675765	005490044	S	3569	CGTCATTAGAAATATTGGAAGGGGATGATCAAGGTGATTGGGAGCAGCAG				5qG2	PREDICTED: Mus musculus autism susceptibility candidate 2 (Auts2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_201576	ILMN_201576	PGLYRPL-PENDING	XM_147345.1	XM_147345.1			20954067	XM_147345.1	Pglyrpl-pending		ILMN_2542959	006580674	S	181	ACTACAGAGCCAGATCCTCACTCTCTCAGCCCGGAGCTTCAAGCACTGAT										
Mus musculus	RefSeq	ILMN_212752	ILMN_228555	LOC666027	XM_981055.1	XM_981055.1		666027	94395264	XM_981055.1	LOC666027	XP_986149.1	ILMN_1245763	005910441	S	318	CGGAGTCATCTGTCCAGCCACCAAAAGAAGGGAGAAAACAAAGACCGAGG	13	-	66815740-66815760:66816435-66816463	13qB3	PREDICTED: Mus musculus hypothetical LOC666027 (LOC666027), mRNA.					
Mus musculus	MEEBO	ILMN_211564	ILMN_211564	MLP	scl0017357.2_67	NM_010807.2			24475927	NM_010807.2	Mlp		ILMN_2617162	005340093	S	267	GGACAGGAGAATGGCCACGTGAGAAGCAATGGAGACTTAACCCCCAAGGG										
Mus musculus	Riken	ILMN_203754	ILMN_203754	A130014O09RIK	ri|A130014O09|PX00121E20|AK037401|2804					AK037401	A130014O09Rik		ILMN_2559724	007510601	S	2185	TGCCTGCCTTGGTATCTGGCACAGTCTTCGCATTGTCAGATGCCGTTAGG										
Mus musculus	Riken	ILMN_202931	ILMN_202931	A230106L22RIK	ri|A230106L22|PX00063B16|AK039191|2169					AK039191	A230106L22Rik		ILMN_2553416	005310615	S	1362	CAGGATACAAGATGGCACTCTCACCTGATTCCTGGGGTCAGAGCCCTCCT										
Mus musculus	RefSeq	ILMN_222471	ILMN_232012	1700058C13RIK	NM_028528.2	NM_028528.2		73388	118130490	NM_028528.2	1700058C13Rik	NP_082804.1	ILMN_1243320	000430400	S	1041	CCCCCAGGTCCCAAAACATCCTGTCCTTTCCAACAATAAACTCTAAGTCT	2	+	153964037-153964086	2qH1	Mus musculus RIKEN cDNA 1700058C13 gene (1700058C13Rik), mRNA.			Interacting selectively with a lipid [goid 8289] [evidence IEA]	RP23-149G14.4	RP23-149G14.4
Mus musculus	RefSeq	ILMN_196511	ILMN_242024	1700031F05RIK	XM_920220.2	XM_920220.2		73300	94408039	XM_920220.2	1700031F05Rik	XP_925313.1	ILMN_1244621	000520601	S	1232	TTTGTCTCATCATGGTTTGCATACGTGGCTAATCTTTTGTGTAGCCATGC				XqD	PREDICTED: Mus musculus RIKEN cDNA 1700031F05 gene, transcript variant 4 (1700031F05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196511	ILMN_242024	1700031F05RIK	XM_920220.2	XM_920220.2		73300	94408039	XM_920220.2	1700031F05Rik	XP_925313.1	ILMN_1243172	002650224	S	577	AGCACCCTACCACTGCTAACCAGGTTCCTGTCATCTGGGCCCAGAATAAC				XqD	PREDICTED: Mus musculus RIKEN cDNA 1700031F05 gene, transcript variant 4 (1700031F05Rik), mRNA.					
Mus musculus	MEEBO	ILMN_191943	ILMN_191943	4930567K20RIK	scl39154.4.1_32						4930567K20Rik		ILMN_2483613	001170543	S	10	CATGGTTATTACTGATGGTGACTACAATACATTTCATAACATTCTAATAA										
Mus musculus	RefSeq	ILMN_217376	ILMN_217376	2610018G03RIK	NM_133729.1	NM_133729.1		70415	19526919	NM_133729.1	2610018G03Rik	NP_598490.1	ILMN_2682522	007650348	S	419	GAAGACATCCAACAAGAAATAACTGTTTTGAGTCAGTGCGACAGCTCATA	X	+	48223583-48223632	XqA5	Mus musculus RIKEN cDNA 2610018G03 gene (2610018G03Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Mst4; RP23-245F8.1	Mst4; RP23-245F8.1
Mus musculus	RefSeq	ILMN_217376	ILMN_217376	2610018G03RIK	NM_133729.1	NM_133729.1		70415	19526919	NM_133729.1	2610018G03Rik	NP_598490.1	ILMN_2760806	002260221	S	1924	TATTCTAAAAATGACTATTTGTAATGAGGTGGAAGTAAGTAATACCTTCT	X	+	48244948-48244997	XqA5	Mus musculus RIKEN cDNA 2610018G03 gene (2610018G03Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Mst4; RP23-245F8.1	Mst4; RP23-245F8.1
Mus musculus	MEEBO	ILMN_215213	ILMN_215213	2310050C09RIK	scl21883.2.89_87				51708238	XM_485268	2310050C09Rik		ILMN_2656841	007650100	S	405	AATGTCCCGCCCCATGCCAGACAACTAATGTGAAGTGCCCAGCTCCGTGT										
Mus musculus	RefSeq	ILMN_217570	ILMN_217570	FNDC4	NM_022424.5	NM_022424.5		64339	146134940	NM_022424.5	Fndc4	NP_071869.2	ILMN_2764255	004180097	S	940	AAGGACAACGACTCCAACAACAACCCCAAGGAGAAGGGGAAGGGGCCTGA				5qB1	Mus musculus fibronectin type III domain containing 4 (Fndc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Fnmp1; 2810430J06Rik; FRCP1; 6330410H20Rik; AB030187; AI838506; AW487863	Fnmp1; 2810430J06Rik; FRCP1; 6330410H20Rik; AB030187; AI838506; AW487863
Mus musculus	RefSeq	ILMN_197988	ILMN_197988	LOC209033	XM_156321.1	XM_156321.1			20894483	XM_156321.1	LOC209033		ILMN_1217545	002030139	S	1265	GCAGTGTGTTCACCTTAAAGGTCTTCTTACTTGGTAATCCAGCCAACCAG										
Mus musculus	RefSeq	ILMN_195245	ILMN_195245	TNFRSF11B	NM_008764.3	NM_008764.3		18383	113930715	NM_008764.3	Tnfrsf11b	NP_032790.3	ILMN_2513826	005220324	S	2180	AGCTGTCATGTCTGGTTCAGTATCTACAGACTGTGTGTCCTCTCATTACC	15	-	54082762-54082811	15qD1	Mus musculus tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) (Tnfrsf11b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx [goid 42489] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	OCIF; TR1; Opg	OCIF; TR1; Opg
Mus musculus	Riken	ILMN_203998	ILMN_203998	IL7R	ri|A630041A17|PX00145L17|AK041838|1549					AK041838	Il7r		ILMN_1237567	007160154	S	1299	CCTACTCCACAGCCACACACAAACTGGATGGCCTTCATCCTACCTTCTCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IGI]; Any process that stops, prevents, or reduces the rate of T cell mediated cytotoxicity [goid 1915] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation in the thymus [goid 33089] [evidence IMP]; Any process that modulates the size of a cell [goid 8361] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IGI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IGI]; The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 2377] [evidence IGI]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218073	ILMN_218073	DPYSL3	NM_009468.3	NM_009468.3		22240	145966872	NM_009468.3	Dpysl3	NP_033494.1	ILMN_1250075	004540379	S	1698	GGCCGCTTCATTCCCTGCAGCCCATTCTCTGACTATGTCTATAAGCGCAT				18qB3	Mus musculus dihydropyrimidinase-like 3 (Dpysl3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Ulip; Ulip1; TUC4; CRMP-4	Ulip; Ulip1; TUC4; CRMP-4
Mus musculus	RefSeq	ILMN_212605	ILMN_212605	PPP1CC	NM_013636.3	NM_013636.3		19047	118130839	NM_013636.3	Ppp1cc	NP_038664.2	ILMN_1220187	003170546	S	21	CGCCCGAGGCTGGCCTGAGGAGTCGGCGGCCATCTTGTTCTTCTCGTGGT	5	+	122608308-122608357	5qF	Mus musculus protein phosphatase 1, catalytic subunit, gamma isoform (Ppp1cc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IMP]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PP1; dis2m1	PP1; dis2m1
Mus musculus	RefSeq	ILMN_212605	ILMN_212605	PPP1CC	NM_013636.3	NM_013636.3		19047	118130839	NM_013636.3	Ppp1cc	NP_038664.2	ILMN_1229753	003930369	S	2028	GGAAGTTAATGACACTTTGTACAGTTCCCATATAGTCTATTCACTGAGTG	5	+	122624927-122624976	5qF	Mus musculus protein phosphatase 1, catalytic subunit, gamma isoform (Ppp1cc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IMP]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PP1; dis2m1	PP1; dis2m1
Mus musculus	Riken	ILMN_203437	ILMN_203437	D530033A12RIK	ri|D530033A12|PX00089J15|AK052575|869					AK052575	D530033A12Rik		ILMN_1257064	004260110	S	567	TTTTGGGAGCCAAGGGCTGGGGAGAGCGGTGCTCAAAGGCAGTCTCCTGA										
Mus musculus	RefSeq	ILMN_197354	ILMN_197354	LOC241715	XM_141432.3	XM_141432.3			38075307	XM_141432.3	LOC241715		ILMN_2527837	001400066	S	150	TCCCACCATTAGTTTACATGCAGTGTCCAGGGATCCAAACGCTCAAGAAC										
Mus musculus	RefSeq	ILMN_222837	ILMN_314610	BC039210	XM_001481316.1	XM_001481316.1		234839	149259310	XM_001481316.1	BC039210	XP_001481366.1	ILMN_2755511	002490037	S	7882	CCTGTACCGATCTCCAGAGACCATGATTAAGTGGACACGTGAGAGGGAGT					PREDICTED: Mus musculus cDNA sequence BC039210 (BC039210), mRNA.					
Mus musculus	RefSeq	ILMN_207277	ILMN_314610	BC039210	XM_001481316.1	XM_001481316.1		234839	149259310	XM_001481316.1	BC039210	XP_001481366.1	ILMN_1212964	004560195	S	7347	TGCCTTCGTGCCGTACTGTTGGGGGCCAGCTCCAAGGTGTGCTTCTCATT					PREDICTED: Mus musculus cDNA sequence BC039210 (BC039210), mRNA.					
Mus musculus	RefSeq	ILMN_199979	ILMN_199979	LOC384136	XM_357446.1	XM_357446.1			38079506	XM_357446.1	LOC384136		ILMN_1231092	000990224	S	95	AGGGACAGGGCAAAGGACAGAATGGTATAGAAGGCTCGGTTCTGCTTCAG										
Mus musculus	RefSeq	ILMN_185240	ILMN_185240	USP1	NM_146144.3	NM_146144.3		230484	141801746	NM_146144.3	Usp1	NP_666256.2	ILMN_2425351	000630437	S	488	CCTGGCGTCATACCTAGTGAAAGTAATGGGCTTTCAAGAGGCAGTCCATC	4	+	98593199-98593248	4qC6	Mus musculus ubiquitin specific peptdiase 1 (Usp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC25559	MGC25559
Mus musculus	RefSeq	ILMN_185240	ILMN_185240	USP1	NM_146144.3	NM_146144.3		230484	141801746	NM_146144.3	Usp1	NP_666256.2	ILMN_2487236	002070181	S	604	TGATTCTCAAGAAAATGAAGAAAAAACTTCTGAATATAGAGGATCTGAGA	4	+	98593315-98593364	4qC6	Mus musculus ubiquitin specific peptdiase 1 (Usp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC25559	MGC25559
Mus musculus	RefSeq	ILMN_189919	ILMN_189919	WDR23	NM_133734.2	NM_133734.2		28199	83816979	NM_133734.2	Wdr23	NP_598495.1	ILMN_1212975	003710243	S	2417	GGTGGCCAGCAGCTTCAACAAAAGAGGATAAAACAGGACTTCTTTCACCT	14	+	56188807-56188856	14qC3	Mus musculus WD repeat domain 23 (Wdr23), mRNA.				0710008A13Rik; D14Ucla1; GLO14; C76035	0710008A13Rik; D14Ucla1; GLO14; C76035
Mus musculus	RefSeq	ILMN_201966	ILMN_189919	WDR23	NM_133734.2	NM_133734.2		28199	83816979	NM_133734.2	Wdr23	NP_598495.1	ILMN_1223568	001190494	S	835	CCAGGACACTCCAGCCTACATCCCGAGCCTTGATGCTTTTGAATTTGTGG	14	+	56183297-56183346	14qC3	Mus musculus WD repeat domain 23 (Wdr23), mRNA.				0710008A13Rik; D14Ucla1; GLO14; C76035	0710008A13Rik; D14Ucla1; GLO14; C76035
Mus musculus	MEEBO	ILMN_187243	ILMN_187243	2310040G07RIK	scl27685.1.1_215						2310040G07Rik		ILMN_1232245	000070326	S	20	GCCTGGCAACCCTGAGCCCAGTTACAGCCCCAGAGATCACCGAAGGTAAA								Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224103	ILMN_253965	RHEB	NM_053075.3	NM_053075.3		19744	133893211	NM_053075.3	Rheb	NP_444305.2	ILMN_2774813	007510170	S	1345	GGTTCTATTAACCCCGGCTCTTTTACCTCACTTGGCCCCAACACCTCCCT	5	-	24308767-24308816	5qA3	Mus musculus RAS-homolog enriched in brain (Rheb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212922	ILMN_212922	ENDOGL1	NM_172456.2	NM_172456.2		208194	110625969	NM_172456.2	Endogl1	NP_766044.1	ILMN_2667144	003840709	S	259	CACTAACCACGCCCTGTCTTACGATCAGGCAAAACGGGTGCCCAGATGGG	9	+	119356134-119356183	9qF3	Mus musculus endonuclease G-like 1 (Endogl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ENGL; AW557704; ENGL-B; ENGL-a; ENDOGL2; 4732466J24	ENGL; AW557704; ENGL-B; ENGL-a; ENDOGL2; 4732466J24
Mus musculus	RefSeq	ILMN_212922	ILMN_212922	ENDOGL1	NM_172456.2	NM_172456.2		208194	110625969	NM_172456.2	Endogl1	NP_766044.1	ILMN_1259684	003310368	S	2392	GCTGGCTTTGGAGTTGCTTCCCACACTCTCCCTACTCAGGAAGAATCTTG	9	+	119373212-119373261	9qF3	Mus musculus endonuclease G-like 1 (Endogl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ENGL; AW557704; ENGL-B; ENGL-a; ENDOGL2; 4732466J24	ENGL; AW557704; ENGL-B; ENGL-a; ENDOGL2; 4732466J24
Mus musculus	RefSeq	ILMN_221914	ILMN_221914	CST6	NM_028623.2	NM_028623.2		73720	31542430	NM_028623.2	Cst6	NP_082899.1	ILMN_2872851	000620180	S	3720	CTGCCTCCCAAATGCTTGGGTTAAAGGTATGTGCCAATGTACCTGGCCCT	19	-	5344886-5344935	19qA	Mus musculus cystatin E/M (Cst6), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IDA]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]	 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	ichq; 1110017E11Rik; N28197	ichq; 1110017E11Rik; N28197
Mus musculus	Riken	ILMN_206136	ILMN_206136	C630030D09RIK	ri|C630030D09|PX00084N21|AK083237|1887					AK083237	C630030D09Rik		ILMN_1214322	002570379	S	1604	GGTGGCCCTGCCCAACTCCTGTTTGTTCTGGGGATGAAGTTGCTGAGCTG										
Mus musculus	RefSeq	ILMN_200007	ILMN_200007	LOC381635	XM_355599.1	XM_355599.1			38079753	XM_355599.1	LOC381635		ILMN_1234615	000430653	S	1046	GCCCTGAGAACACAGTCCAAGTCACCTGTTCTCGAGCATATCCAACCGGT										
Mus musculus	MEEBO	ILMN_185370	ILMN_185370	3830612M24	scl32148.1.343_79						3830612M24		ILMN_2426480	005130070	S	13	GAAGACTTGCCATCCAGTCCCGTTCTCGCAGACAACTGTGTTACCGCCCA										
Mus musculus	MEEBO	ILMN_184276	ILMN_184276	4930543E12RIK	scl30794.6.1_93						4930543E12Rik		ILMN_2417314	003940750	S	9	GGACTGTTCTTTTTCCTGTTCTGGTCTATTTGATACTACAGGACGCGTAG										
Mus musculus	RefSeq	ILMN_220316	ILMN_220316	A230074B11RIK	NM_177334.3	NM_177334.3		215413	142373339	NM_177334.3	A230074B11Rik	NP_796308.1	ILMN_2720495	006040279	S	1519	TTGGACATGCTAGCGTTCACTTCTTGGAAGGCCCCCGTAGAGCTGGCGGT	1	+	37133590-37133639	1qB	Mus musculus RIKEN cDNA A230074B11 gene (A230074B11Rik), mRNA.					
Mus musculus	Riken	ILMN_206741	ILMN_206741	D230047F17RIK	ri|D230047F17|PX00189J18|AK084442|2755					AK084442	D230047F17Rik		ILMN_1235953	006040605	S	2354	GCGGTAGCTGGTGGCTCTCATGCCTGGCTTTTGTCTTTGCAGACACTGAG										
Mus musculus	RefSeq	ILMN_216281	ILMN_234260	SASS6	NM_028349.1	NM_028349.1		72776	58037300	NM_028349.1	Sass6	NP_082625.1	ILMN_2669343	005960386	S	2048	CCTGGGCAGTTACCAAGTAGTTAATCCAACACCTTTTACTGCTCACCGAC	3	+	116331709-116331732:116331733-116331758	3qG1	Mus musculus spindle assembly 6 homolog (C. elegans) (Sass6), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		2810453L12Rik	2810453L12Rik
Mus musculus	RefSeq	ILMN_211499	ILMN_211499	PTGFRN	NM_011197.3	NM_011197.3		19221	118130246	NM_011197.3	Ptgfrn	NP_035327.2	ILMN_2616452	007380131	S	2104	CTGTGCATTCAGACACACCATCCGTCACCCGGGGAGATCTCATCAAATTG	3	-	100877057-100877106	3qF2.2	Mus musculus prostaglandin F2 receptor negative regulator (Ptgfrn), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD9P-1; 4833445A08Rik; FPRP; Trim45; AU042434	CD9P-1; 4833445A08Rik; FPRP; Trim45; AU042434
Mus musculus	RefSeq	ILMN_211359	ILMN_211359	OLFR521	NM_146356.1	NM_146356.1		258353	22129586	NM_146356.1	Olfr521	NP_666468.1	ILMN_2615054	004010327	S	901	GATGTCAAGTCGGCCATCACTAAAATGATGTGTCACCAGGATCCAAAGAG	7	+	106916574-106916623	7qE2	Mus musculus olfactory receptor 521 (Olfr521), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR101-2; MGC123835	MOR101-2; MGC123835
Mus musculus	RefSeq	ILMN_198562	ILMN_239614	1190020J12RIK	NM_001081115.1	NM_001081115.1		233038	124487434	NM_001081115.1	1190020J12Rik	NP_001074584.1	ILMN_1217003	007000114	S	1385	GGCCTCTCAGATCCTGCTTGGTCCCTGGCTCTCCTTTGACATCTCTACGC	7	-	29328711-29328760	7qA3	Mus musculus RIKEN cDNA 1190020J12 gene (1190020J12Rik), mRNA.				Gm163	Gm163
Mus musculus	RefSeq	ILMN_197050	ILMN_256063	CCDC121	XM_906534.2	XM_906534.2		403180	94364676	XM_906534.2	Ccdc121	XP_911627.1	ILMN_1259013	000060091	S	469	GGCAGAAAGACCCAGAAGGATTTGAAGCAGCAGTTGCAGGCACTGAAGCC				1qH5	PREDICTED: Mus musculus coiled-coil domain containing 121 (Ccdc121), mRNA.					
Mus musculus	RefSeq	ILMN_231642	ILMN_231642	9130409I23RIK	NM_001033819.1	NM_001033819.1		619326	85702158	NM_001033819.1	9130409I23Rik	NP_001028991.1	ILMN_2830666	002970360	S	1565	CTAGGTCAGAAATGAAGCCACTATCTGGTAACTAGGGGCCATAAACTGGG	1	+	182897009-182897058	1qH4	Mus musculus RIKEN cDNA 9130409I23 gene (9130409I23Rik), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222268	ILMN_222268	RUNX3	NM_019732.2	NM_019732.2		12399	84579890	NM_019732.2	Runx3	NP_062706.2	ILMN_2747141	001170241	S	1751	GGGCCAGCCGAATCCTTCCCTCCAGCCCGAGACTACAAGAAGAAACAGAC	4	+	134731765-134731814	4qD3	Mus musculus runt related transcription factor 3 (Runx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IGI]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Cbfa3; Pebp2a3; AML2	Cbfa3; Pebp2a3; AML2
Mus musculus	RefSeq	ILMN_217591	ILMN_252191	PTPN23	NM_001081043.1	NM_001081043.1		104831	124517677	NM_001081043.1	Ptpn23	NP_001074512.1	ILMN_1235509	000270753	S	3994	AATGCTAGCTGTGTGGAGGGGCTCTCGCCATACTGTCCACCCTTAGTGGC	9	-	110289340-110289389	9qF2	Mus musculus protein tyrosine phosphatase, non-receptor type 23 (Ptpn23), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	AI462446; PTP-TD14	AI462446; PTP-TD14
Mus musculus	RefSeq	ILMN_230049	ILMN_230049	OTTMUSG00000000990	NM_001045543.1	NM_001045543.1		629303	113865928	NM_001045543.1	OTTMUSG00000000990	NP_001039008.1	ILMN_2931853	001510154	S	1618	GAGCCCAGATGACTTGTGCATCACGGACTTTCGACGGGCTAAGCTGAACC	11	-	83325445-83325494	11qC	Mus musculus predicted gene, OTTMUSG00000000990 (OTTMUSG00000000990), mRNA.					
Mus musculus	Riken	ILMN_202629	ILMN_202629	SUV39H1	ri|C330004H14|PX00075L01|AK021174|1166					AK021174	Suv39h1		ILMN_1259102	002030706	S	1093	TCTGCTTTCCTGTAAGAAAAGCCTATGGTGTTGGTCTGAGTATTACAGGG						The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence TAS]; Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process by which DNA and associated proteins are formed into a compact, orderly structure [goid 6323] [evidence TAS]; Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence TAS]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IGI]	Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IDA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_217695	ILMN_217695	5430419D17RIK	scl31981.21.1_1	NM_175166.2			31340957	NM_175166.2	5430419D17Rik		ILMN_2686522	002350471	S	2263	GTGTTCAGGAACGGAAAACCACTTTGGCCAGTGTTCCAGCTCTGCCTGGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219825	ILMN_219825	OLFR1323	NM_146390.1	NM_146390.1		258385	33239073	NM_146390.1	Olfr1323	NP_666502.1	ILMN_2714040	002320037	S	756	TGGAACAACTATGTACACGTATTTGCAACCCTCTCGGCATGGATCTCAAG	X	-	47362607-47362656	XqA5	Mus musculus olfactory receptor 1323 (Olfr1323), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR216-1	MOR216-1
Mus musculus	RefSeq	ILMN_184312	ILMN_255376	B230315N10RIK	XM_916781.1	XM_916781.1		237411	94388773	XM_916781.1	B230315N10Rik	XP_921874.1	ILMN_2417602	002970162	S	1954	ACTGCAAACATGTTGTCATCTAAGAATAACGGAACCCATTGTCTCATGAC	10	-	81687046-81687095	10qC1	PREDICTED: Mus musculus RIKEN cDNA B230315N10 gene, transcript variant 1 (B230315N10Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191846	ILMN_314006	LOC100047391	XM_001478051.1	XM_001478051.1		100047391	149257971	XM_001478051.1	LOC100047391	XP_001478101.1	ILMN_2482722	007510609	S	914	CACTGGCTGGAGCACACAAGCAGGTGGTTGTACAGCTTCGAGAGCAGCTG					PREDICTED: Mus musculus similar to Tmc7 protein (LOC100047391), mRNA.					
Mus musculus	MEEBO	ILMN_185157	ILMN_185157	IGHV1S37_M13789_IG_HEAVY_VARIABLE_1S37_136	IGHV1S37_M13789_Ig_heavy_variable_1S37_136						IGHV1S37_M13789_Ig_heavy_variable_1S37_136		ILMN_1214816	000770446	S	20	GATCCTTCCGATAGTGAAACTAGGTTAAATCAGAAGTTCAAGGACAAGGC										
Mus musculus	Riken	ILMN_202848	ILMN_202848	A130021F14RIK	ri|A130021F14|PX00122K03|AK079479|1302					AK079479	A130021F14Rik		ILMN_1232431	001820079	S	830	TTGAGGCTGTTGCCAGTGTGCTTCTTTTTTATTTAGGTCTTTGGGACCTG										
Mus musculus	RefSeq	ILMN_216677	ILMN_230346	RPL18A	NM_029751.3	NM_029751.3		76808	141803580	NM_029751.3	Rpl18a	NP_084027.1	ILMN_2673936	006770246	S	184	CAGCTGAAGAAGATGAAGAAGTCATCCGGGGAAATTGTGTACTGCGGACA	8	-	73420032-73420081	8qB3.3	Mus musculus Ribosomal protein L18A (Rpl18a), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2510019J09Rik	2510019J09Rik
Mus musculus	RefSeq	ILMN_219045	ILMN_219045	2010311D03RIK	NM_133839.2	NM_133839.2		109129	118130860	NM_133839.2	2010311D03Rik	NP_598600.1	ILMN_1241035	004920273	S	280	GGACCTCAGGACCAGAGATTCCAGCTTCCTGGGAATATAGGCTTCGATTG	2	-	50146931-50146980	2qC1.1	Mus musculus RIKEN cDNA 2010311D03 gene (2010311D03Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			AI314967	AI314967
Mus musculus	MEEBO	ILMN_217591	ILMN_217591	PTPN23	scl35321.1_1	XM_135197.4			38090128	XM_135197.4	Ptpn23		ILMN_2685166	007000201	S	3271	ATGCTAGCTGTGTGGAGGGGCTCTCGCCATACTGTCCACCCTTAGTGGCC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215056	ILMN_215056	ALAD	NM_008525.3	NM_008525.3		17025	34328484	NM_008525.3	Alad	NP_032551.3	ILMN_2655015	002510037	S	1296	GACCAAGCTCCCTGGGCCTTACAGAAGGGGGAAAGTAAATGCGCTGTTAG	4	-	62170208-62170257	4qB3	Mus musculus aminolevulinate, delta-, dehydratase (Alad), mRNA.		The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next [goid 33014] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2 5-aminolevulinate = porphobilinogen + 2 H2O [goid 4655] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	Lv	Lv
Mus musculus	RefSeq	ILMN_216434	ILMN_257975	PLAC8L1	XM_910139.2	XM_910139.2		69401	94404828	XM_910139.2	Plac8l1	XP_915232.1	ILMN_1215532	002510452	S	538	GAACTTCTCAACTCTACGAAATCTGTGAAGTCCCTGAACTCAAGAACACC				18qB3	PREDICTED: Mus musculus PLAC8-like 1 (Plac8l1), mRNA.					
Mus musculus	RefSeq	ILMN_217660	ILMN_217660	IFNAR1	NM_010508.1	NM_010508.1		15975	6754301	NM_010508.1	Ifnar1	NP_034638.1	ILMN_1222758	005810424	S	3637	AAGACATGTAAGCAAAGACAGTTGTACACAGAGAAGTCAAACCTTTTTGA	16	+	91507425-91507474	16qC3.3	Mus musculus interferon (alpha and beta) receptor 1 (Ifnar1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IGI]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interferon to initiate a change in cell activity [goid 4904] [evidence IMP]; Catalysis of the reaction: ATP + 5-phospho-D-ribosylamine + glycine = ADP + phosphate + N1-(5-phospho-D-ribosyl)glycinamide [goid 4637] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CD118; Infar; Ifnar; Ifar; Ifrc	CD118; Infar; Ifnar; Ifar; Ifrc
Mus musculus	Riken	ILMN_206278	ILMN_206278	MMS19L	ri|E230029F03|PX00210L17|AK087633|2630					AK087633	Mms19l		ILMN_1260012	002940082	S	2438	GCCAGACTTACCAGAGACAGACATCTCATCCAAGCCACCAAAGCCCCGAG										
Mus musculus	RefSeq	ILMN_213943	ILMN_213943	BOLA2	NM_175103.2	NM_175103.2		66162	31341241	NM_175103.2	Bola2	NP_780312.1	ILMN_2846368	006060468	S	143	TTCCGAGTCCTGGTGGTGTCGGCTAAGTTCGAGGGAAAGCCACTGCTCCA	7	+	126487373-126487422	7qF3	Mus musculus bolA-like 2 (E. coli) (Bola2), mRNA.				1110025L05Rik; BolA-2	1110025L05Rik; BolA-2
Mus musculus	RefSeq	ILMN_196876	ILMN_310476	AU024076	XR_031927.1	XR_031927.1		98582	149233632	XR_031927.1	AU024076		ILMN_1244800	005130133	S	677	CTCCATATCCGGAGTCATCCTCTGACGGATCAAGACCTGCAGATTCATCT	1	+	21374897-21374946	1qA4	PREDICTED: Mus musculus expressed sequence AU024076 (AU024076), misc RNA.					
Mus musculus	Riken	ILMN_207278	ILMN_207278	G630038I01RIK	ri|G630038I01|PL00013J13|AK090290|2701					AK090290	G630038I01Rik		ILMN_2586393	003990709	S	2363	TAAGCTGGAAGGCAGGACCAGGGCTGCAGGAGCTGAGCGGGATAACAGTT										
Mus musculus	RefSeq	ILMN_222915	ILMN_222915	NUP160	NM_021512.2	NM_021512.2		59015	118130462	NM_021512.2	Nup160	NP_067487.1	ILMN_2756716	001440440	S	5169	TTCACTTCCCGTAATAGCTAATGGTTGTTGGTTTGTTACAGCTGACCACC	2	+	90575970-90576019	2qE1	Mus musculus nucleoporin 160 (Nup160), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [evidence IDA]	Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence IDA]	KIAA0197; Gtl-13; 160kDa; Gtl1-13; mKIAA0197; Gtl13; AA414952; AU020188; 2810011M03Rik	KIAA0197; Gtl-13; 160kDa; Gtl1-13; mKIAA0197; Gtl13; AA414952; AU020188; 2810011M03Rik
Mus musculus	RefSeq	ILMN_210409	ILMN_210409	LIMS1	NM_026148.2	NM_026148.2		110829	84794646	NM_026148.2	Lims1	NP_080424.2	ILMN_1254747	005820243	S	1272	CACAGATGAAATCAGGACTTTCATTTCTTTAGCCATATTAGTCTGTAGGC	10	+	57884465-57884514	10qB4	Mus musculus LIM and senescent cell antigen-like domains 1 (Lims1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IMP]; The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching [goid 43009] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI507642; PINCH; C430041B13Rik; AW551584; AU021743; PINCH1; 2310016J22Rik; 4921524A02Rik; Lims1l	AI507642; PINCH; C430041B13Rik; AW551584; AU021743; PINCH1; 2310016J22Rik; 4921524A02Rik; Lims1l
Mus musculus	RefSeq	ILMN_210409	ILMN_210409	LIMS1	NM_026148.2	NM_026148.2		110829	84794646	NM_026148.2	Lims1	NP_080424.2	ILMN_1217702	005960762	S	1989	TTGTGATGTTGGGGAAATGAAGCATTTTAAAACTATATTACACATAAAAT	10	+	57885182-57885231	10qB4	Mus musculus LIM and senescent cell antigen-like domains 1 (Lims1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IMP]; The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching [goid 43009] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI507642; PINCH; C430041B13Rik; AW551584; AU021743; PINCH1; 2310016J22Rik; 4921524A02Rik; Lims1l	AI507642; PINCH; C430041B13Rik; AW551584; AU021743; PINCH1; 2310016J22Rik; 4921524A02Rik; Lims1l
Mus musculus	RefSeq	ILMN_209539	ILMN_209539	AOC2	NM_178932.1	NM_178932.1		237940	34098971	NM_178932.1	Aoc2	NP_849263.1	ILMN_2913069	005390372	S	2251	CAGCTGGCAGACTGTGTCCCCAACTTACCCTCCTTTTCCTATGAAGGCTT	11	+	101190724-101190773	11qD	Mus musculus amine oxidase, copper containing 2 (retina-specific) (Aoc2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds [goid 48038] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]	RAO	RAO
Mus musculus	RefSeq	ILMN_209539	ILMN_209539	AOC2	NM_178932.1	NM_178932.1		237940	34098971	NM_178932.1	Aoc2	NP_849263.1	ILMN_1242109	001580735	S	1839	GATCCACAGCCCTCCTGGTGTGCATGTGCCTCTGGAGAGCAGCGAGGAGA	11	+	101189875-101189924	11qD	Mus musculus amine oxidase, copper containing 2 (retina-specific) (Aoc2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds [goid 48038] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]	RAO	RAO
Mus musculus	RefSeq	ILMN_209539	ILMN_209539	AOC2	NM_178932.1	NM_178932.1		237940	34098971	NM_178932.1	Aoc2	NP_849263.1	ILMN_2694842	000840176	S	2185	AGCGTGTACTTTGAGAGGGACCAGGATGCCGGGCTCTGCAGCATCAACCC	11	+	101190658-101190707	11qD	Mus musculus amine oxidase, copper containing 2 (retina-specific) (Aoc2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds [goid 48038] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]	RAO	RAO
Mus musculus	MEEBO	ILMN_184371	ILMN_184371	EPN2	scl40125.1.1_246				33468892	NM_010148	Epn2		ILMN_1244006	004830220	S	4060	GCACACGTGCCACCATGCCCTTCTTGATGAATACCCTGAAGGAAGTCACC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]		
Mus musculus	Riken	ILMN_202336	ILMN_202336	5730417B17RIK	ri|5730417B17|PX00038G19|AK017569|1682					AK017569	5730417B17Rik		ILMN_2548818	004230156	S	1066	GCTGTTGGATCAAACTTTTATTCTCCTCTCGGAGGGTCTGATTTTGCCCC										
Mus musculus	RefSeq	ILMN_187650	ILMN_248736	CDC26	NM_139291.3	NM_139291.3		66440	142363144	NM_139291.3	Cdc26	NP_647452.1	ILMN_2588986	005560687	S	590	GGAGTACCAACCAGATTTAGAGAATTAAGTGTGTGCAACCAAGCAGAAGG	4	-	62055777-62055826	4qB3	Mus musculus cell division cycle 26 (Cdc26), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence ISO]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC130281; 2010012C09Rik	MGC130281; 2010012C09Rik
Mus musculus	RefSeq	ILMN_222701	ILMN_222701	PDE6A	NM_146086.2	NM_146086.2		225600	31560752	NM_146086.2	Pde6a	NP_666198.1	ILMN_2858753	005270181	S	3837	GGGCTTCAGCAGACATCGCCTTCAGGGGTTTCCTCAGCTGCAGGATATTC	18	+	61449011-61449060	18qE1	Mus musculus phosphodiesterase 6A, cGMP-specific, rod, alpha (Pde6a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]	Pdea; MGC25111	Pdea; MGC25111
Mus musculus	RefSeq	ILMN_222701	ILMN_222701	PDE6A	NM_146086.2	NM_146086.2		225600	31560752	NM_146086.2	Pde6a	NP_666198.1	ILMN_2753568	006560440	S	3190	TCCCAAAAGTACAGAATTATACATCAAATACCCACAAACTTACCCCAGAT	18	+	61448364-61448413	18qE1	Mus musculus phosphodiesterase 6A, cGMP-specific, rod, alpha (Pde6a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]	Pdea; MGC25111	Pdea; MGC25111
Mus musculus	RefSeq	ILMN_210937	ILMN_210937	MLC1	NM_133241.2	NM_133241.2		170790	126722621	NM_133241.2	Mlc1	NP_573504.1	ILMN_2610788	002370576	S	2255	GAAAATCGTCTCTTGTATACTTTTGTCTGTTATAGATTAATATGCTTGAG	15	-	88786338-88786387	15qE3	Mus musculus megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) (Mlc1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Kiaa0027-hp; VL; AW048630; MLC; WKL1; mKIAA0027; BB074274; LVM	Kiaa0027-hp; VL; AW048630; MLC; WKL1; mKIAA0027; BB074274; LVM
Mus musculus	MEEBO	ILMN_223889	ILMN_223889	DRCTNNB1A	scl084652.1_47				16716376	NM_053090	Drctnnb1a		ILMN_2771087	006290132	S	5627	GGGACACGGCCTGACCCCTTTAAGCCCATCTCTGTAGCACAGAACAGCAG										
Mus musculus	RefSeq	ILMN_185813	ILMN_185813	TMEM2	NM_031997.3	NM_031997.3		83921	76253925	NM_031997.3	Tmem2	NP_114386.3	ILMN_3113437	000150129	A	4563	GATGAGCAGGGCCTCGGAGTGCTTGAGCAGTTTCTCCCGTTGCAGATGGA	19	+	21930713-21930762	19qB	Mus musculus transmembrane protein 2 (Tmem2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC102198; mKIAA1412; 3110012M15Rik	MGC102198; mKIAA1412; 3110012M15Rik
Mus musculus	RefSeq	ILMN_185813	ILMN_185813	TMEM2	NM_031997.3	NM_031997.3		83921	76253925	NM_031997.3	Tmem2	NP_114386.3	ILMN_3039065	003990059	I	474	CTGAGCCGTCACCTGTTCTCTGTCAGCCTGTGGATGAGAGTAAGCTGAGG	19	+	21854689-21854738	19qB	Mus musculus transmembrane protein 2 (Tmem2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC102198; mKIAA1412; 3110012M15Rik	MGC102198; mKIAA1412; 3110012M15Rik
Mus musculus	RefSeq	ILMN_223832	ILMN_229635	ZBTB32	NM_021397.2	NM_021397.2		58206	134032010	NM_021397.2	Zbtb32	NP_067372.2	ILMN_2770119	003520142	S	1622	GAACTGCGAGACAGGAGCTACGAACCCTTCCGGGACAAGCGAGTTGCAGA	7	-	31374803-31374852	7qB1	Mus musculus zinc finger and BTB domain containing 32 (Zbtb32), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; Any process that modulates the frequency, rate, or extent of production of a cytokine [goid 1817] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	FAXF; FAZF; PLZP; Rog; 4930524C15Rik; Tzfp	FAXF; FAZF; PLZP; Rog; 4930524C15Rik; Tzfp
Mus musculus	RefSeq	ILMN_217476	ILMN_260251	4933401F05RIK	NM_001081063.1	NM_001081063.1		71037	124486703	NM_001081063.1	4933401F05Rik	NP_001074532.1	ILMN_2683640	005080671	S	602	CCAGCCTCACCACAAACATGCTGTGTGCCTCATATGGTAATGAGAGCTAC	14	-	64695929-64695978	14qD1	Mus musculus RIKEN cDNA 4933401F05 gene (4933401F05Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MGC144424	MGC144424
Mus musculus	RefSeq	ILMN_197863	ILMN_197863	GM438	XM_144115.6	XM_144115.6		329993	94372737	XM_144115.6	Gm438	XP_144115.5	ILMN_1248574	000610327	S	597	GGCCACGGTCACCCAGGTCTTAACAAGCATGCCAAATCTACCTCGAATCC	4	-	144367881-144367930	4qE1	PREDICTED: Mus musculus gene model 438, (NCBI) (Gm438), mRNA.					
Mus musculus	RefSeq	ILMN_247999	ILMN_247999	TMEM171	NM_001025606.1	NM_001025606.1		380863	71037372	NM_001025606.1	Tmem171	NP_001020777.1	ILMN_2987487	003890671	S	986	CCTCTGGACCTGCCCCCTAGATATGAAGAAAAAGAAACTGCCCCAGCCAC	13	-	99456312-99456361	13qD1	Mus musculus transmembrane protein 171 (Tmem171), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm905; MGC117733	Gm905; MGC117733
Mus musculus	RefSeq	ILMN_185239	ILMN_314235	C030018G13RIK	XM_001471865.1	XM_001471865.1		241076	149233967	XM_001471865.1	C030018G13Rik	XP_001471915.1	ILMN_2596152	006650538	S	996	ATGCCAGAGGTCACGCTATGCCACCTACTTCGATGTTGCCGTTCTCCGCT				1qC3	PREDICTED: Mus musculus RIKEN cDNA C030018G13 gene (C030018G13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_261128	ILMN_261128	JOSD3	NM_027261.1	NM_027261.1		75316	109240553	NM_027261.1	Josd3	NP_081537.1	ILMN_3136867	006560228	A	588	GCATGCTGGGGAAGATTTAGAAAAGGAAGACCTTGACAGTCGGAGGCACA				9qA2	Mus musculus Josephin domain containing 3 (Josd3), transcript variant 3, mRNA.				4930553M18Rik; MGC117821; 5930426I11Rik; 2810003M17Rik	4930553M18Rik; MGC117821; 5930426I11Rik; 2810003M17Rik
Mus musculus	MEEBO	ILMN_223791	ILMN_223791	RWDD3	scl073170.1_63				39930448	NM_028456	Rwdd3		ILMN_2769216	006220603	S	1091	TTTTTATAGAGACAATTTGTTTAGAACTCTGCAATTTTCAGGCTAATTTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_212592	ILMN_212592	CDCA4	NM_028023.3	NM_028023.3		71963	34328499	NM_028023.3	Cdca4	NP_082299.1	ILMN_2809202	007160066	S	2022	ATGCCCGAACCACCCAGCACCACATGCTCCATGTCAAGTGTGTACGTGGA	12	-	114058793-114058842	12qF1	Mus musculus cell division cycle associated 4 (Cdca4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SEI-3; 2410018C03Rik; HEPP	SEI-3; 2410018C03Rik; HEPP
Mus musculus	RefSeq	ILMN_212592	ILMN_212592	CDCA4	NM_028023.3	NM_028023.3		71963	34328499	NM_028023.3	Cdca4	NP_082299.1	ILMN_2755224	004860653	S	1289	GGCCACCAGTCCCCATGGAGCTCACGTGTGTTGTGACCCAGAGACAGATA	12	-	114059526-114059575	12qF1	Mus musculus cell division cycle associated 4 (Cdca4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SEI-3; 2410018C03Rik; HEPP	SEI-3; 2410018C03Rik; HEPP
Mus musculus	RefSeq	ILMN_212592	ILMN_212592	CDCA4	NM_028023.3	NM_028023.3		71963	34328499	NM_028023.3	Cdca4	NP_082299.1	ILMN_1214671	004920468	S	2277	CGGCACTGTCAGACTCCACCCCATGTATCCTTTTTGTTTCTCTTGTGCTT	12	-	114058538-114058587	12qF1	Mus musculus cell division cycle associated 4 (Cdca4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SEI-3; 2410018C03Rik; HEPP	SEI-3; 2410018C03Rik; HEPP
Mus musculus	RefSeq	ILMN_200752	ILMN_200752	LOC381851	XM_355863.1	XM_355863.1			38085888	XM_355863.1	LOC381851		ILMN_1240682	003310246	S	382	TCACACCTCCACTTCTGCGGGGACAGGGCTTCTCCGGATCTGGCTCCTAT										
Mus musculus	RefSeq	ILMN_222706	ILMN_222706	CD2	NM_013486.2	NM_013486.2		12481	118129928	NM_013486.2	Cd2	NP_038514.1	ILMN_2753697	000060221	S	833	AGCCGCACTCAACCCCAGCCGCAGCAGCGCAGAATTCAGTGGCGCTCCAA	3	-	101088632-101088666:101091330-101091344	3qF2.2	Mus musculus CD2 antigen (Cd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [evidence IDA]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [evidence IMP]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	Ly-37; Ly37; LFA-2	Ly-37; Ly37; LFA-2
Mus musculus	RefSeq	ILMN_198791	ILMN_319145	EG666160	XR_033995.1	XR_033995.1		666160	149257396	XR_033995.1	EG666160		ILMN_1214335	004590379	S	2674	GCAGCCAAGCAAGAGCTGCTTAAGGGACCACAGCCCAATAGGTACCCACA				7qD3	PREDICTED: Mus musculus predicted gene, EG666160 (EG666160), misc RNA.					
Mus musculus	RefSeq	ILMN_196595	ILMN_316632	LOC100041416	XM_001476334.1	XM_001476334.1		100041416	149272530	XM_001476334.1	LOC100041416	XP_001476384.1	ILMN_2738233	003390521	S	642	TGACTTCCCAGATGGACACACAGGTGATTGAGGTTATGGTCTCATTACCA	X	+	156719658-156719707	XqF4	PREDICTED: Mus musculus hypothetical protein LOC100041416 (LOC100041416), mRNA.					
Mus musculus	RefSeq	ILMN_234472	ILMN_234472	LOC100039753	NM_001017394.1	NM_001017394.1		100039753	62860007	NM_001017394.1	LOC100039753	NP_001017394.1	ILMN_2819553	000130709	S	915	GTTTATCTTCCTGTGTTGGGTACCTATGGGTCTTTGACAACCTCATTATC	Y	+	294475-294524		Mus musculus similar to putative (LOC100039753), mRNA.					
Mus musculus	RefSeq	ILMN_216852	ILMN_216852	LALBA	NM_010679.1	NM_010679.1		16770	6754499	NM_010679.1	Lalba	NP_034809.1	ILMN_2676107	004040026	S	311	ATTGGATGACGAGTTGGATGATGACATAGCGTGTGCCAAGAAGATCCTGG	15	-	98311983-98312032	15qF1	Mus musculus lactalbumin, alpha (Lalba), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lactose, the disaccharide galactopyranosyl-glucose [goid 5989] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: UDP-galactose + D-glucose = UDP + lactose [goid 4461] [evidence IEA]	AW208827	AW208827
Mus musculus	RefSeq	ILMN_255153	ILMN_255153	EG434171	NM_001013810.1	NM_001013810.1		434171	85701499	NM_001013810.1	EG434171	NP_001013832.1	ILMN_2879144	001820575	S	2661	CTGATATGGAAACTTCTCTTTATTATGGCTATGCAATGTAGGAGCTGGCC	7	-	38227957-38227967:38227968-38228006	7qB2	Mus musculus predicted gene, EG434171 (EG434171), mRNA.					
Mus musculus	RefSeq	ILMN_222293	ILMN_222293	NCOA7	NM_172495.3	NM_172495.3		211329	56790922	NM_172495.3	Ncoa7	NP_766083.3	ILMN_2747528	005670709	S	3424	ATCTGATTTAGAGAAATTGAAAGGATATAGCACTTAAAGGGAATATCTGA	10	-	30366852-30366901	10qA4	Mus musculus nuclear receptor coactivator 7 (Ncoa7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		9030406N13Rik	9030406N13Rik
Mus musculus	RefSeq	ILMN_215019	ILMN_227031	CYP2C44	NM_001001446.2	NM_001001446.2		226143	48374084	NM_001001446.2	Cyp2c44	NP_001001446.2	ILMN_2654582	004150025	S	1700	CCCTAAGCACAACTGACACCAGATCCACAAGGCCCTCATCAGACGCCACC	19	-	44079678-44079727	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 44 (Cyp2c44), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	MGC37849; MGC37835; BC034834; MGC25860; AW107714	MGC37849; MGC37835; BC034834; MGC25860; AW107714
Mus musculus	MEEBO	ILMN_187179	ILMN_187179	SCL0002337.1_39	scl0002337.1_39	AK050226.1			26340943	AK050226.1	scl0002337.1_39		ILMN_2441850	006420047	S	19	TGTCCCCAGCCCCCCAGGATACATGTCAGATCAAGAGGAGGAGATGTGCT										
Mus musculus	MEEBO	ILMN_212133	ILMN_212133	B930006L02RIK	scl00319604.2_16	NM_178764.2			31343423	NM_178764.2	B930006L02Rik		ILMN_2623110	004060541	S	3697	AGGGGGTTATGTGACCACAGCTGGCAAGGTGACACGTAGCTGGCAGGAAT										
Mus musculus	RefSeq	ILMN_200937	ILMN_256860	EG627967	XM_912473.2	XM_912473.2		627967	94381209	XM_912473.2	EG627967	XP_917566.1	ILMN_1218926	002360068	S	46	CGCCACTGGATGCTGGACAAACTGACTGGCATATTCGCGCACCACCTGCA				7qF1	PREDICTED: Mus musculus predicted gene, EG627967 (EG627967), mRNA.					
Mus musculus	RefSeq	ILMN_196547	ILMN_196547	2400006N03RIK	XM_126152.3	XM_126152.3			38091444	XM_126152.3	2400006N03Rik		ILMN_2524776	004900411	S	417	AGGCTGCAGGTAGCACGCCGGGGACAGCCTCAGACAGACTTCTTGTGCAA										
Mus musculus	RefSeq	ILMN_191565	ILMN_191565	WWOX	NM_019573.2	NM_019573.2		80707	31980961	NM_019573.2	Wwox	NP_062519.2	ILMN_2480178	006270653	S	984	TCTCCAATGAACTGCACCGTCGCCTCTCCCCGCGCGGGGTCACATCCAAC	8	+	117236003-117236052	8qE1	Mus musculus WW domain-containing oxidoreductase (Wwox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5330426P09Rik; WOX1; 9030416C10Rik	5330426P09Rik; WOX1; 9030416C10Rik
Mus musculus	RefSeq	ILMN_191565	ILMN_191565	WWOX	NM_019573.2	NM_019573.2		80707	31980961	NM_019573.2	Wwox	NP_062519.2	ILMN_1252913	005860431	S	1959	TTAGAGATTATAACGAGTGCATTTTACATTTTGCAAACCATTCCCTAGGC	8	+	117876364-117876413	8qE1	Mus musculus WW domain-containing oxidoreductase (Wwox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5330426P09Rik; WOX1; 9030416C10Rik	5330426P09Rik; WOX1; 9030416C10Rik
Mus musculus	RefSeq	ILMN_191565	ILMN_191565	WWOX	NM_019573.2	NM_019573.2		80707	31980961	NM_019573.2	Wwox	NP_062519.2	ILMN_2485055	002680129	S	1620	AACCTTAGAATAACCTGATATCCCCTCGACCCACCCAGCTGCCACCACTG	8	+	117876025-117876074	8qE1	Mus musculus WW domain-containing oxidoreductase (Wwox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5330426P09Rik; WOX1; 9030416C10Rik	5330426P09Rik; WOX1; 9030416C10Rik
Mus musculus	RefSeq	ILMN_222466	ILMN_222466	HMGB2	NM_008252.2	NM_008252.2		97165	31982287	NM_008252.2	Hmgb2	NP_032278.1	ILMN_3156604	005290279	A	78	TTGGGGAAGGAAGTCTCTCTGCGGAGGTCTGAGGGAAGCAGCGCTCGCAG	8	+	59990750-59990799	8qB2	Mus musculus high mobility group box 2 (Hmgb2), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C80539; MGC103184; Hmg2; HMG-2	C80539; MGC103184; Hmg2; HMG-2
Mus musculus	RefSeq	ILMN_214944	ILMN_214944	GABRA1	NM_010250.4	NM_010250.4		14394	145966746	NM_010250.4	Gabra1	NP_034380.1	ILMN_2653747	006590564	S	3941	GCTATCCAATGATGTTGGAAAACACACTGCCTGTGTTTCCCTAAAACGAC				11qA5	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1 (Gabra1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]	Gabra-1	Gabra-1
Mus musculus	RefSeq	ILMN_211831	ILMN_239134	CLINT1	NM_001045520.3	NM_001045520.3		216705	154240729	NM_001045520.3	Clint1	NP_001038985.2	ILMN_1235782	002350195	S	3035	GAGTGTGTAATACCGCATTAGCAATATGGTTCCAATAGAAGTTCGATATA				11qB1.1	Mus musculus clathrin interactor 1 (Clint1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	mKIAA0171; KIAA0171; AI642036; Enth; F630206G17Rik; C530049I24Rik; Epn4; RP23-298M7.4; AW537616	mKIAA0171; KIAA0171; AI642036; Enth; F630206G17Rik; C530049I24Rik; Epn4; RP23-298M7.4; AW537616
Mus musculus	RefSeq	ILMN_212039	ILMN_212039	TSEN2	NM_199033.1	NM_199033.1		381802	39841064	NM_199033.1	Tsen2	NP_950198.1	ILMN_2622057	005570367	S	1397	CCCGAGAGAGAAGTGACCAAGATGAGCTTTGACCTTCCAATCCCAGAGTC	6	+	115527977-115528008:115528009-115528026	6qE3	Mus musculus tRNA splicing endonuclease 2 homolog (S. cerevisiae) (Tsen2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex that catalyzes the endonucleolytic cleavage of pre-tRNA, producing 5'-hydroxyl and 2',3'-cyclic phosphate termini, and specifically removing the intron [goid 214] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Splicing of tRNA substrates via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons [goid 6388] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of pre-tRNA, producing 5'-hydroxyl and 2',3'-cyclic phosphate termini, and specifically removing the intron [goid 213] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC69703; AU067695	MGC69703; AU067695
Mus musculus	MEEBO	ILMN_194758	ILMN_194758	FOXO1	scl23210.3_685				34328254	NM_019739	Foxo1		ILMN_2509340	004290112	S	20	TGTCAGATATGCCATGGGAACCTGCTACTCTGGAAACAGTTGGAGCCTCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_203835	ILMN_218907	JMJD4	NM_178659.5	NM_178659.5		194952	146198585	NM_178659.5	Jmjd4	NP_848774.1	ILMN_2560328	006660100	S	903	TCCAGCACCACAGCCTTCCCATTGAAGTCATACAGGAGCCTGGTGAGATG				11qB1.3	Mus musculus jumonji domain containing 4 (Jmjd4), mRNA.				6430559I23; RP23-210M6.10; AU020939	6430559I23; RP23-210M6.10; AU020939
Mus musculus	RefSeq	ILMN_218907	ILMN_218907	JMJD4	NM_178659.5	NM_178659.5		194952	146198585	NM_178659.5	Jmjd4	NP_848774.1	ILMN_2701792	001440017	S	3814	TGCAGTTAAATAGTTGGAGAACTCAAGTGTAGATACAGATTAGGGGAGGG				11qB1.3	Mus musculus jumonji domain containing 4 (Jmjd4), mRNA.				6430559I23; RP23-210M6.10; AU020939	6430559I23; RP23-210M6.10; AU020939
Mus musculus	Riken	ILMN_207303	ILMN_207303	4732481D19RIK	ri|4732481D19|PX00637N18|AK076385|2499					AK076385	4732481D19Rik		ILMN_1237738	001580193	S	2149	GCGAAATGCCAGGAAGACGCCTAAAAAAGGTCTGTGCACCACGTGAATGC										
Mus musculus	RefSeq	ILMN_221140	ILMN_221140	GTDC1	NM_172662.1	NM_172662.1		227835	27369951	NM_172662.1	Gtdc1	NP_766250.1	ILMN_3003518	002100079	S	2074	AATTGGGCAGCCATCTCAAAGCTGCTGTAGGCAAAGGGCTGCTGTAGCAC	2	-	44386861-44386910	2qB	Mus musculus glycosyltransferase-like domain containing 1 (Gtdc1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	E330008O22Rik	E330008O22Rik
Mus musculus	RefSeq	ILMN_216759	ILMN_216759	D2ERTD750E	NM_026412.1	NM_026412.1		51944	13385905	NM_026412.1	D2Ertd750e	NP_080688.1	ILMN_2795949	000240286	S	1263	GCAGCAGAGAGAGCAGCAGCCCTTAGAACTAGGATACTAAACCAGCTGCC	2	+	118525798-118525847	2qE5	Mus musculus DNA segment, Chr 2, ERATO Doi 750, expressed (D2Ertd750e), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700025D04Rik; C15orf23	1700025D04Rik; C15orf23
Mus musculus	MEEBO	ILMN_189355	ILMN_189355	VAMP4	scl000897.1_256				3108178	AF061516	Vamp4		ILMN_2460555	001850427	S	5	GCCTATGTAGAGTCCTGACTCTTTGCTGCAAGAGATGCATAACCATCCTA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_202685	ILMN_202685	4933433P14RIK	ri|A430108M13|PX00064O08|AK020785|421					AK020785	4933433P14Rik		ILMN_2551506	001170209	S	3	CGAGTCTCCGGACGAGGAAGGATAAGAACATGGGCGCTCGCAGAATGGAA										
Mus musculus	RefSeq	ILMN_215687	ILMN_215687	ILK	NM_010562.1	NM_010562.1		16202	6754341	NM_010562.1	Ilk	NP_034692.1	ILMN_2662428	005700739	S	494	CATCTGTAACAAGTATGGAGAGATGCCTGTGGACAAAGCCAAGGCACCCC	7	+	112889320-112889369	7qE3	Mus musculus integrin linked kinase (Ilk), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence ISA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IDA]; Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell [goid 45197] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ESTM24; AA511515	ESTM24; AA511515
Mus musculus	RefSeq	ILMN_215687	ILMN_215687	ILK	NM_010562.1	NM_010562.1		16202	6754341	NM_010562.1	Ilk	NP_034692.1	ILMN_2842137	002510520	S	1342	GGCCTACCGTCCCACCAGGTATTTCCCCCCATGTGTGTAAGCTCATGAAG	7	+	112891052-112891101	7qE3	Mus musculus integrin linked kinase (Ilk), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence ISA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IDA]; Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell [goid 45197] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ESTM24; AA511515	ESTM24; AA511515
Mus musculus	RefSeq	ILMN_199390	ILMN_199390	OLFR345	NM_146945.1	NM_146945.1		258947	33239289	NM_146945.1	Olfr345	NP_667156.1	ILMN_1212921	002750431	S	549	CTGGTTGAAGCTGTCCAGCTCAGACACCACCATCAATGAATTGGTTATTC	2	+	36496109-36496158	2qB	Mus musculus olfactory receptor 345 (Olfr345), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR136-7	MOR136-7
Mus musculus	RefSeq	ILMN_218441	ILMN_218441	OLFR170	NM_146957.1	NM_146957.1		258959	22129010	NM_146957.1	Olfr170	NP_667168.1	ILMN_2695874	004780338	S	872	GCTTTCGGAATAAAGATGTCCTCAGGGCTTTGAAAAACATAGTCCAAAGT	16	-	19605838-19605887	16qA3	Mus musculus olfactory receptor 170 (Olfr170), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR273-2	MOR273-2
Mus musculus	RefSeq	ILMN_217701	ILMN_217701	ACSBG1	NM_053178.2	NM_053178.2		94180	133891660	NM_053178.2	Acsbg1	NP_444408.1	ILMN_2686611	002900603	S	2228	CCGGCCCTACCACATCCAGAAGTGGGCCATTCTCCAACGTGACTTCTCCA	9	-	54456840-54456889	9qA5.3	Mus musculus acyl-CoA synthetase bubblegum family member 1 (Acsbg1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence ISS]; The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [evidence ISS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + a very-long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; very-long-chain fatty acids have chain lengths of greater than C18 [goid 31957] [evidence ISS]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	R75185; BG1; E230019G03Rik; mKIAA0631; Lpd; Bgm	R75185; BG1; E230019G03Rik; mKIAA0631; Lpd; Bgm
Mus musculus	MEEBO	ILMN_223820	ILMN_223820	RECK	scl053614.23_117				7710063	NM_016678	Reck		ILMN_2769877	006520603	S	3818	CTGCTTTTTGTAATGTGCACAGTGTGGATAAGTGTGTGTCCGACTTTCCT						Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state [goid 1955] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state [goid 1955] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IDA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence ISO]		
Mus musculus	RefSeq	ILMN_190632	ILMN_257331	ITPRIPL2	NM_001033380.3	NM_001033380.3		319622	146149224	NM_001033380.3	Itpripl2	NP_001028552.1	ILMN_1223082	000650521	S	6107	CTCTTGTCACCTCCCAGAGGAAGTCACGTTTTCCACAGAACTGTGCTTCC				7qF2	Mus musculus inositol 1,4,5-triphosphate receptor interacting protein-like 2 (Itpripl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C130081G24	C130081G24
Mus musculus	RefSeq	ILMN_189109	ILMN_257331	ITPRIPL2	NM_001033380.3	NM_001033380.3		319622	146149224	NM_001033380.3	Itpripl2	NP_001028552.1	ILMN_1252004	004150601	S	5397	CCTTGCCTTACACAGTTAGCCTTCTCCCAGGTATGTATAGGCTTATATTC				7qF2	Mus musculus inositol 1,4,5-triphosphate receptor interacting protein-like 2 (Itpripl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C130081G24	C130081G24
Mus musculus	RefSeq	ILMN_188538	ILMN_248630	9330167E06	XM_907235.2	XM_907235.2		328399	94397422	XM_907235.2	9330167E06	XP_912328.1	ILMN_2453512	005810086	S	3700	CCCAAAACACCAAAGTGACCTCCAGACAGTAACATGAGAATAATACAGGA					PREDICTED: Mus musculus hypothetical protein 9330167E06 (9330167E06), mRNA.					
Mus musculus	RefSeq	ILMN_204779	ILMN_227295	D430007A19RIK	XM_923363.2	XM_923363.2		320431	94404884	XM_923363.2	D430007A19Rik	XP_928456.1	ILMN_1214178	003990398	S	3129	GGCCCACTTCCAAGACCAAGGGGCCAGTTATATGGAATTCTGGGAGCCGC					PREDICTED: Mus musculus RIKEN cDNA D430007A19 gene, transcript variant 3 (D430007A19Rik), mRNA.					
Mus musculus	Riken	ILMN_204676	ILMN_204676	A230047M05RIK	ri|A230047M05|PX00127F15|AK038585|4000					AK038585	A230047M05Rik		ILMN_1251387	007150646	S	3794	AGTCACTCAGTCAGGAGATCAACCAAGTACCAGACACAGTATTAAGCCGG										
Mus musculus	RefSeq	ILMN_196166	ILMN_241667	LOC236598	NR_003279.1	NR_003279.1		236598	120444900	NR_003279.1	LOC236598		ILMN_1248092	001400706	S	664	CCGGCCGGCGACCGGCCGCCGCCGGGCGCACTTCCACCGTGGCGGTGCGC					Mus musculus 28S ribosomal RNA (LOC236598), non-coding RNA.				28S	28S
Mus musculus	RefSeq	ILMN_189366	ILMN_189366	UNC93B1	NM_019449.1	NM_019449.1		54445	23956093	NM_019449.1	Unc93b1	NP_062322.1	ILMN_2795078	002100689	S	1968	CCAGAGCCTGGGGTCACCTGGAACTTCCTCCAAGGAGATAAGGGTCACTC	19	+	3949075-3949124	19qA	Mus musculus unc-93 homolog B1 (C. elegans) (Unc93b1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any series of molecular signals generated as a consequence of binding to a toll-like receptor. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2224] [evidence IMP]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Unc93b	Unc93b
Mus musculus	RefSeq	ILMN_189366	ILMN_189366	UNC93B1	NM_019449.1	NM_019449.1		54445	23956093	NM_019449.1	Unc93b1	NP_062322.1	ILMN_2460653	005090403	S	1435	GGCAGGACTTCATCTTCACCATCTATCACTGGTGGCAGGCCGTGGCCATC	19	+	3947040-3947089	19qA	Mus musculus unc-93 homolog B1 (C. elegans) (Unc93b1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any series of molecular signals generated as a consequence of binding to a toll-like receptor. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2224] [evidence IMP]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Unc93b	Unc93b
Mus musculus	Riken	ILMN_206676	ILMN_206676	E330032D13RIK	ri|E330032D13|PX00212M24|AK087860|2246					AK087860	E330032D13Rik		ILMN_1242265	002480553	S	2134	CCACCTCTAATGTGGGGAATGTACAATGTGCAGAGGTTATTTTGATGCTA										
Mus musculus	RefSeq	ILMN_249923	ILMN_249923	DDHD1	NM_001039106.2	NM_001039106.2		114874	111955151	NM_001039106.2	Ddhd1	NP_001034195.2	ILMN_3163148	001940564	A	2500	CACAGTGGCTCCGGCTTCCTCGACTCCGCATTGGAACTGGAACACAGGAT	14	-	46215311-46215339:46221240-46221260	14qC1	Mus musculus DDHD domain containing 1 (Ddhd1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C85251; 9630061G18Rik; mKIAA1705; 4921528E07Rik	C85251; 9630061G18Rik; mKIAA1705; 4921528E07Rik
Mus musculus	MEEBO	ILMN_208816	ILMN_208816	SYTL2	scl00050.1_2	NM_031394.1			13878230	NM_031394.1	Sytl2		ILMN_2589803	002450220	S	1497	GGTGAGCCTGAGCCATCACAGACAGCAGACCACAGTTTTAGAGACCATCG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IPI]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IDA]		
Mus musculus	Riken	ILMN_207112	ILMN_207112	CYP11A	ri|7330411N07|PX00650D13|AK078635|1596					AK078635	Cyp11a		ILMN_2585128	003780538	S	1462	GGATGTTAACTCCCAAGACCGACTATTACCAGGGCCACGGTGGCTGTGAG										
Mus musculus	Riken	ILMN_203577	ILMN_203577	A230068D05RIK	ri|A230068D05|PX00129I13|AK038845|2368					AK038845	A230068D05Rik		ILMN_1230633	000620022	S	2065	CTGGTCAGTCAGGCATGGGAGGGCTGCTACCTATCCTATCCACTCATCCC										
Mus musculus	RefSeq	ILMN_219540	ILMN_219540	CHST12	NM_021528.2	NM_021528.2		59031	31981188	NM_021528.2	Chst12	NP_067503.2	ILMN_2710205	005570639	S	1315	CCCCCTGGCATGGAGGCAACAGCTCTATAAACTCTACGAGGCCGACTTTG	5	+	141000740-141000789	5qG2	Mus musculus carbohydrate sulfotransferase 12 (Chst12), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 4'-sulfate [goid 47756] [evidence IEA]	C4S-2; C4ST2; C4ST-2; AI595374	C4S-2; C4ST2; C4ST-2; AI595374
Mus musculus	RefSeq	ILMN_192693	ILMN_242840	E230016M11RIK	XM_989634.2	XM_989634.2		320172	149255184	XM_989634.2	E230016M11Rik	XP_994728.1	ILMN_1226631	004640551	S	423	TACACTTATGTATAAAAACCATCTCTATTATATACCTTTTTTGTGTGTCT	6	+	67030060-67030109	6qC1	PREDICTED: Mus musculus RIKEN cDNA E230016M11 gene (E230016M11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_240826	ILMN_240826	DCPP1	NM_019910.2	NM_019910.2		13184	110815810	NM_019910.2	Dcpp1	NP_064294.2	ILMN_2829129	006550035	S	369	GACCAACCAGCCTCGCCAGCTAATGGTGGGGTATTATGTGGGCAATTCTG	17	+	24019572-24019621	17qA3.3	Mus musculus demilune cell and parotid protein 1 (Dcpp1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p20; MGC11676; C86550; Dcpp; BC005655; MGC102440; Dcpp-1	p20; MGC11676; C86550; Dcpp; BC005655; MGC102440; Dcpp-1
Mus musculus	RefSeq	ILMN_219832	ILMN_219832	TASP1	NM_175225.3	NM_175225.3		75812	142365071	NM_175225.3	Tasp1	NP_780434.1	ILMN_2714138	003990372	S	2066	TATGGTGTCAGTTTAAGTGGATGGTGTGGTAACTTAAACTCTTGTTCTCA	2	-	139659580-139659629	2qF3	Mus musculus taspase, threonine aspartase 1 (Tasp1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]	AW986064; 4930485D02Rik	AW986064; 4930485D02Rik
Mus musculus	RefSeq	ILMN_215221	ILMN_215221	A830053O21RIK	NM_177182.3	NM_177182.3		320522	40254309	NM_177182.3	A830053O21Rik	NP_796156.2	ILMN_2656915	003360537	S	968	GGAGATTTTAGGTTTGGACTTGGTCAACCCCTTGTTCCTGGAAAGTGGCC	11	+	76486939-76486988	11qB5	Mus musculus RIKEN cDNA A830053O21 gene (A830053O21Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	RP23-343C18.1	RP23-343C18.1
Mus musculus	RefSeq	ILMN_194863	ILMN_258411	ZDHHC11	NM_027704.2	NM_027704.2		71164	113931664	NM_027704.2	Zdhhc11	NP_081980.1	ILMN_2510310	006250270	S	1105	GGCAAGGATGAGCCCTTCTTTCATCATGGAAACACCAAGGTATCAGCCCA	13	+	74130092-74130141	13qC1	Mus musculus zinc finger, DHHC domain containing 11 (Zdhhc11), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC151180; 4933421L13Rik; Zdhhc20; MGC151184	MGC151180; 4933421L13Rik; Zdhhc20; MGC151184
Mus musculus	Riken	ILMN_203016	ILMN_203016	MSI2H	ri|6030413L18|PX00056D12|AK031365|2508					AK031365	Msi2h		ILMN_1214668	006380544	S	2343	GCCCTGATCACTGGCTTCTTTTTCATGCTTGTTTAGACTGCCTGGGCCCT										
Mus musculus	Riken	ILMN_202166	ILMN_202166	3110030G19RIK	ri|3110030G19|ZX00071J23|AK014097|2354					AK014097	3110030G19Rik		ILMN_1225097	003800477	S	2264	CGACAGGCGAGAATGAGAAACAGTAACCCTGACAGGTAGCCTCTGGATAC										
Mus musculus	RefSeq	ILMN_207451	ILMN_207451	3830406C13RIK	NM_146051.2	NM_146051.2		218734	114051375	NM_146051.2	3830406C13Rik	NP_666163.1	ILMN_1260604	007040672	I	341	GAAGAAGCAGTGATCCAATGCGGAAAAATCTCTGGCTCAAAGTTGTGCAT	14	+	13132244-13132256:13132257-13132293	14qA1	Mus musculus RIKEN cDNA 3830406C13 gene (3830406C13Rik), transcript variant 1, mRNA.				MGC36213; AV167947	MGC36213; AV167947
Mus musculus	MEEBO	ILMN_213760	ILMN_213760	1700040D17RIK	scl21870.2.1_0				51708263	XM_489015	1700040D17Rik		ILMN_2640506	003940475	S	475	CCTCTCTTTAAGCCTAGTTTGCTCCAATGATCTATTCATATTCTAATGCC										
Mus musculus	Riken	ILMN_206621	ILMN_206621	7530433C13RIK	ri|7530433C13|PX00312C10|AK078731|1817					AK078731	7530433C13Rik		ILMN_1238193	005270240	S	1597	TACCCCAGAGGGAGAGAGGGCAGGGAGTCAGAGACAAAGACAGGAGATGG										
Mus musculus	Riken	ILMN_204145	ILMN_204145	SKZ1-PENDING	ri|C730004D03|PX00086G14|AK050028|1422					AK050028	Skz1-pending		ILMN_1213382	007320180	S	1303	TCCCCTGTACTGTTCTGGCTGAGAGGAGATGCTCAGGGAATACTGAGTGC										
Mus musculus	RefSeq	ILMN_219295	ILMN_219295	RS1	NM_011302.3	NM_011302.3		20147	42476340	NM_011302.3	Rs1	NP_035432.3	ILMN_2706905	001450402	S	5241	TTAGGGGGCAACTAATTCAATAAAGATTATATAATGGAGGAAAGTCATTC	X	+	157236996-157237045	XqF4	Mus musculus retinoschisis (X-linked, juvenile) 1 (human) (Rs1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	tmgc1; Rs1h; Xlrs1	tmgc1; Rs1h; Xlrs1
Mus musculus	RefSeq	ILMN_212497	ILMN_212497	MYH7	NM_080728.2	NM_080728.2		140781	118131045	NM_080728.2	Myh7	NP_542766.1	ILMN_2665239	003420735	S	2490	CATCATCACCAGAATCCAGGCCCAGTCCCGAGGTGTGCTCTCCAGAATGG	14	-	55603915-55603964	14qC3	Mus musculus myosin, heavy polypeptide 7, cardiac muscle, beta (Myh7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	Myhc-b; Myhcb	Myhc-b; Myhcb
Mus musculus	RefSeq	ILMN_212497	ILMN_212497	MYH7	NM_080728.2	NM_080728.2		140781	118131045	NM_080728.2	Myh7	NP_542766.1	ILMN_2945491	001230594	S	3846	GGAGCAGATCATCAAGGCCAAGGCTAACCTGGAGAAGATGTGCCGGACCT	14	-	55597802-55597830:55598010-55598030	14qC3	Mus musculus myosin, heavy polypeptide 7, cardiac muscle, beta (Myh7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	Myhc-b; Myhcb	Myhc-b; Myhcb
Mus musculus	RefSeq	ILMN_217778	ILMN_255519	EFCAB3	NM_001081046.1	NM_001081046.1		70894	124486665	NM_001081046.1	Efcab3	NP_001074515.1	ILMN_2687503	000990725	S	1632	AAACCGCTTTCCATAGTAATCAAAAGTATGGTTTCTTGCTTTTATCTATT	11	+	104978739-104978788	11qE1	Mus musculus EF-hand calcium binding domain 3 (Efcab3), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212100	ILMN_325137	LOC100043322	XM_001479731.1	XM_001479731.1		100043322	149265725	XM_001479731.1	LOC100043322	XP_001479781.1	ILMN_2622718	004260164	S	126	TAATGCTCAGAAGGAACAATGGAGACTCTGTGACCCAGACAGAAGGCCTG	14	+	54236115-54236123:54236298-54236338	14qC2	PREDICTED: Mus musculus similar to T cell receptor V alpha 8.5 (LOC100043322), mRNA.					
Mus musculus	RefSeq	ILMN_221213	ILMN_221213	CNGA3	NM_009918.1	NM_009918.1		12790	33859523	NM_009918.1	Cnga3	NP_034048.1	ILMN_1214994	003360347	S	3264	GCCCCTTATCCTAGCTATGTTATAAATGGATGTCTTACGGGGCTGGTGAG	1	+	37319995-37320044	1qB	Mus musculus cyclic nucleotide gated channel alpha 3 (Cnga3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a cation by a channel that opens when intracellular cyclic nucleotide has been bound by the channel complex or one of its constituent parts [goid 5221] [evidence IPI]	CNG3	CNG3
Mus musculus	RefSeq	ILMN_221213	ILMN_221213	CNGA3	NM_009918.1	NM_009918.1		12790	33859523	NM_009918.1	Cnga3	NP_034048.1	ILMN_1237058	001770497	S	2431	GGCGAAGGTTGTGGCTTTGGAAAGCGTGAAGAGTTCCCAACCCAGTGTAT	1	+	37319162-37319211	1qB	Mus musculus cyclic nucleotide gated channel alpha 3 (Cnga3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a cation by a channel that opens when intracellular cyclic nucleotide has been bound by the channel complex or one of its constituent parts [goid 5221] [evidence IPI]	CNG3	CNG3
Mus musculus	MEEBO	ILMN_187557	ILMN_187557	IGHV1S52_M34982_IG_HEAVY_VARIABLE_1S52_158	IGHV1S52_M34982_Ig_heavy_variable_1S52_158						IGHV1S52_M34982_Ig_heavy_variable_1S52_158		ILMN_2445154	004920377	S	14	AGTGGGTAAAGCAGAGGCCTGGACAGGGCCTGGAGTGGATTGGAGTGATT										
Mus musculus	RefSeq	ILMN_195839	ILMN_195839	TWIST1	NM_011658.2	NM_011658.2		22160	54020725	NM_011658.2	Twist1	NP_035788.1	ILMN_1236188	007100497	S	1121	AGAGAAAGCGAGACAGGCCCGTGGACAGAGATTCCCAGAGGGGCAGCAGC	12	+	34644187-34644236	12qA3	Mus musculus twist gene homolog 1 (Drosophila) (Twist1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	M-Twist; Twist; AA960487; Ska10; pdt; Ska<m10Jus>; Pde; MGC103391	M-Twist; Twist; AA960487; Ska10; pdt; Ska<m10Jus>; Pde; MGC103391
Mus musculus	MEEBO	ILMN_210709	ILMN_210709	8430438D04RIK	scl0278279.1_174	NM_177368.2			31340777	NM_177368.2	8430438D04Rik		ILMN_1240249	005820497	S	4256	CCAATATCATTATGTCGCAAACCTTGACAATTAGTTGCATCATACCCCAC										
Mus musculus	MEEBO	ILMN_194598	ILMN_194598	D830044D21RIK	scl46485.2_703				31343077	NM_177210	D830044D21Rik		ILMN_2507853	004390358	S	11	TGCTGAACTGTACACTTAAAATACTTCAATGGTGAGTGAATTCATTATAC										
Mus musculus	MEEBO	ILMN_194598	ILMN_194598	D830044D21RIK	scl46485.2_703				31343077	NM_177210	D830044D21Rik		ILMN_2761338	006330288	S	1991	GGGAAGAGCTAGCTGATGTTCTGTTCTGGGGTAGCTGGATCTTTAACCAA										
Mus musculus	RefSeq	ILMN_214219	ILMN_214219	ASNSD1	NM_133728.2	NM_133728.2		70396	31981566	NM_133728.2	Asnsd1	NP_598489.2	ILMN_2753643	001010086	S	2199	GGATCTAGAATTGCAAAACTGGAAAAATCTAATGAGAAGGCATCTGATAA	1	-	53401601-53401650	1qC1.1	Mus musculus asparagine synthetase domain containing 1 (Asnsd1), mRNA. XM_920067		The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid [goid 6529] [evidence IEA]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate [goid 4066] [evidence IEA]	2210409M21Rik	2210409M21Rik
Mus musculus	RefSeq	ILMN_214219	ILMN_214219	ASNSD1	NM_133728.2	NM_133728.2		70396	31981566	NM_133728.2	Asnsd1	NP_598489.2	ILMN_1229430	002810121	S	1593	GACCGAGTCACAGGAAAAGCAGGACTAAAGGAACTACAGTCTGTCAACCC	1	-	53404060-53404109	1qC1.1	Mus musculus asparagine synthetase domain containing 1 (Asnsd1), mRNA. XM_920067		The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid [goid 6529] [evidence IEA]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate [goid 4066] [evidence IEA]	2210409M21Rik	2210409M21Rik
Mus musculus	RefSeq	ILMN_214219	ILMN_214219	ASNSD1	NM_133728.2	NM_133728.2		70396	31981566	NM_133728.2	Asnsd1	NP_598489.2	ILMN_1229211	003840431	S	1611	GCAGGACTAAAGGAACTACAGTCTGTCAACCCTTCTCGAACTTGGAATTT	1	-	53404042-53404091	1qC1.1	Mus musculus asparagine synthetase domain containing 1 (Asnsd1), mRNA. XM_920067		The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid [goid 6529] [evidence IEA]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate [goid 4066] [evidence IEA]	2210409M21Rik	2210409M21Rik
Mus musculus	RefSeq	ILMN_232037	ILMN_232037	EG432555	NM_001024230.1	NM_001024230.1		432555	70608096	NM_001024230.1	EG432555	NP_001019401.1	ILMN_3162671	003840215	I	2646	CTCTTTCAGAGAGAGAATACCACTGTGGCAAGTAGAAGAGTTTCCCACGG	11	-	48701756-48701805	11qB1.2	Mus musculus predicted gene, EG432555 (EG432555), mRNA.					
Mus musculus	RefSeq	ILMN_221246	ILMN_221246	LINGO4	NM_177250.2	NM_177250.2		320747	31343168	NM_177250.2	Lingo4	NP_796224.1	ILMN_1219543	000780341	S	2675	CCTACTTCTTCCCATTTTAGCCACTGGTCATCTAGCCTCCACCTCACAGG	3	+	94208155-94208204	3qF2.1	Mus musculus leucine rich repeat and Ig domain containing 4 (Lingo4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A530050P17Rik; Lrrn6d	A530050P17Rik; Lrrn6d
Mus musculus	RefSeq	ILMN_213313	ILMN_213313	FAM120B	NM_024203.3	NM_024203.3		67544	75905502	NM_024203.3	Fam120b	NP_077165.2	ILMN_2635888	004480497	S	2903	GAATGCTCTCCTGACCTTAGCAGGAGTCTAACTCCAAACATTTTCTTACT	17	+	15568929-15568978	17qA2	Mus musculus family with sequence similarity 120, member B (Fam120b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		KIAA1838; Pgcc1; MGC109687; mKIAA1838; AW049283; AW413338	KIAA1838; Pgcc1; MGC109687; mKIAA1838; AW049283; AW413338
Mus musculus	MEEBO	ILMN_194301	ILMN_194301	CSMD2	scl24937.11.1_14						Csmd2		ILMN_2505192	006580068	S	3	CCTGCAACGAGGGCTATGACCTGCAAGGGTCCAAGAGAATCACCTGCATG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_203599	ILMN_203599	A930005L19RIK	ri|A930005L19|PX00065B05|AK044290|2711					AK044290	A930005L19Rik		ILMN_1236442	005080092	S	2321	CATCATTCTCTCTCAGTCACTTAGAACTGGGTGGGCTATGGGGACTTGCC										
Mus musculus	RefSeq	ILMN_184501	ILMN_250013	CHRNG	NM_009604.3	NM_009604.3		11449	119964695	NM_009604.3	Chrng	NP_033734.3	ILMN_2707570	006110341	S	1613	GGGCCATGCTGTTTGTAGAGCTGTATCCCGTGTTGATGCTGAGTGTGCTC	1	+	89108102-89108151	1qD	Mus musculus cholinergic receptor, nicotinic, gamma polypeptide (Chrng), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]	 [goid 4889] [evidence IGI];  [goid 4889] [evidence IGI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Acrg; Achr-3	Acrg; Achr-3
Mus musculus	RefSeq	ILMN_212746	ILMN_212746	EPHA3	NM_010140.3	NM_010140.3		13837	145966729	NM_010140.3	Epha3	NP_034270.1	ILMN_2629805	004280136	S	2976	GGTGTCACTGTGGTTGGGCCACAGAAGAAGATCATCAGCACCATTAAAGC				16qC1.3	Mus musculus Eph receptor A3 (Epha3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IDA]	Mek4; ETK1; End3; Hek; Tyro4; Cek4; AW492086; Hek4	Mek4; ETK1; End3; Hek; Tyro4; Cek4; AW492086; Hek4
Mus musculus	RefSeq	ILMN_185335	ILMN_224594	TSC22D2	NM_001081229.1	NM_001081229.1		72033	124487000	NM_001081229.1	Tsc22d2	NP_001074698.1	ILMN_2426190	003610711	S	8691	TGGAAGGATACTAACCCAGCTGTTTACAGTAGTCTGGCGGTGTGTGTTAG	3	+	58270571-58270620	3qD	Mus musculus TSC22 domain family, member 2 (Tsc22d2), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IDA]		5530402M19Rik; 1810043J12Rik	5530402M19Rik; 1810043J12Rik
Mus musculus	RefSeq	ILMN_210098	ILMN_224594	TSC22D2	NM_001081229.1	NM_001081229.1		72033	124487000	NM_001081229.1	Tsc22d2	NP_001074698.1	ILMN_2602204	005910347	S	3307	GTCTAGCATGATCTGCATGGCCTGTAATCTTTGAACCACTTTCGTACCTC	3	+	58265187-58265236	3qD	Mus musculus TSC22 domain family, member 2 (Tsc22d2), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IDA]		5530402M19Rik; 1810043J12Rik	5530402M19Rik; 1810043J12Rik
Mus musculus	RefSeq	ILMN_184822	ILMN_236288	KLHDC10	NM_029742.2	NM_029742.2		76788	118130658	NM_029742.2	Klhdc10	NP_084018.1	ILMN_2638147	001710161	S	5792	CTAGCCTGAAACGTTCCACCTGTACTTCCCTACCTTGTCAGTGTTCGCTG	6	+	30405083-30405132	6qA3.3	Mus musculus kelch domain containing 10 (Klhdc10), mRNA.				AI593221; mKIAA0265; KIAA0265	AI593221; mKIAA0265; KIAA0265
Mus musculus	RefSeq	ILMN_219315	ILMN_219315	PHF17	NM_172303.3	NM_172303.3		269424	40556383	NM_172303.3	Phf17	NP_758507.3	ILMN_2763024	004890152	S	1815	GAGATGCAGTGCAGAATAGTTCTGGGACCGAGGGCAAGACCTCGCATAAG	3	+	41417209-41417258	3qB	Mus musculus PHD finger protein 17 (Phf17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU041499; mKIAA1807; D530048A03Rik; Jade1	AU041499; mKIAA1807; D530048A03Rik; Jade1
Mus musculus	RefSeq	ILMN_219315	ILMN_219315	PHF17	NM_172303.3	NM_172303.3		269424	40556383	NM_172303.3	Phf17	NP_758507.3	ILMN_2707137	004150292	S	5102	GTAACCTTGTACAGAGGATTTTTCACTATGTGCCTAGCTTGGTGTCCATT	3	+	41420496-41420545	3qB	Mus musculus PHD finger protein 17 (Phf17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU041499; mKIAA1807; D530048A03Rik; Jade1	AU041499; mKIAA1807; D530048A03Rik; Jade1
Mus musculus	RefSeq	ILMN_260688	ILMN_260688	RAB5B	NM_011229.1	NM_011229.1		19344	6755261	NM_011229.1	Rab5b	NP_035359.1	ILMN_3163335	007000044	A	397	AGGAACTACAGCGGCAAGCCAGCCCTAGCATTGTTATTGCCTTGGCAGGG	10	-	128118528-128118535:128119880-128119921	10qD3	Mus musculus RAB5B, member RAS oncogene family (Rab5b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence IDA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	C030027M18Rik	C030027M18Rik
Mus musculus	Riken	ILMN_205568	ILMN_205568	CSNA	ri|D730019F13|PX00090F19|AK052808|802					AK052808	Csna		ILMN_1223439	004480736	S	419	GTGCACCCTGGTAAGACTTCAATGAATCTCTCAGAAACCAAAGGTCAAGC										
Mus musculus	RefSeq	ILMN_210622	ILMN_210622	PLEC1	NM_201393.1	NM_201393.1		18810	41322938	NM_201393.1	Plec1	NP_958795.1	ILMN_1256786	001850021	S	179	GGCTGCGAGCAGGTCCGCAGGGGCTACCTCTACGGGCAACTCTGTTGTGT	15	-	76028411-76028460	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 10, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; AA591047; AU042537; PLTN; PCN	EBS1; AA591047; AU042537; PLTN; PCN
Mus musculus	RefSeq	ILMN_217878	ILMN_210622	PLEC1	NM_201393.1	NM_201393.1		18810	41322938	NM_201393.1	Plec1	NP_958795.1	ILMN_2710419	006960201	S	14846	CTTGAGCTGGTGGCAGGTGGAGATGCCAGGCAGAACACTAACCTGACCAT	15	-	76001454-76001503	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 10, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; AA591047; AU042537; PLTN; PCN	EBS1; AA591047; AU042537; PLTN; PCN
Mus musculus	RefSeq	ILMN_220337	ILMN_220337	DCPS	NM_027030.2	NM_027030.2		69305	142352443	NM_027030.2	Dcps	NP_081306.1	ILMN_2720770	002680128	S	686	CGCCGGGGTATCAGATCACTTCGAGATCTCACTCCAGAGCATCTGCCACT	9	-	34933919-34933968	9qA4	Mus musculus decapping enzyme, scavenger (Dcps), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; Cleavage of the 5'-cap of a nuclear mRNA triggered by shortening of the poly(A) tail to below a minimum functional length [goid 290] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA408441; 1700001E16Rik	AA408441; 1700001E16Rik
Mus musculus	MEEBO	ILMN_194439	ILMN_194439	KY	scl36554.12_414				48762512	NM_024291	Ky		ILMN_1222235	004040463	S	5212	GTGTAATAAACCCCCAAGAGTTATTCCCCCCTGTTGCATATTTGGCCCCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_239273	ILMN_239273	OTTMUSG00000010328	NM_001005371.1	NM_001005371.1		381569	52851397	NM_001005371.1	OTTMUSG00000010328	NP_001005371.1	ILMN_2931516	007570437	S	1590	GCTGGAAGGAGCATAGATGTGTCAACCACCTAAATGTCTGAGACACACTG	4	-	143076848-143076897	4qE1	Mus musculus predicted gene, OTTMUSG00000010328 (OTTMUSG00000010328), mRNA.				MGC91195	MGC91195
Mus musculus	RefSeq	ILMN_216266	ILMN_216266	CCDC9	NM_172297.1	NM_172297.1		243846	26986618	NM_172297.1	Ccdc9	NP_758501.1	ILMN_3008230	004590615	S	1683	CCACCAGCCTGTGTCTGACTGGGGTGAGGAGATGGAACTGAATTCTCCCG	7	-	16861059-16861108	7qA2	Mus musculus coiled-coil domain containing 9 (Ccdc9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2600011L02Rik	2600011L02Rik
Mus musculus	RefSeq	ILMN_188754	ILMN_188754	VNN1	NM_011704.1	NM_011704.1		22361	6755978	NM_011704.1	Vnn1	NP_035834.1	ILMN_2455422	002470204	S	1845	TCTATTATACATCTTACTCAGTTATGCTTAGAATTTCCAATGTGTTTGTT	10	+	23624745-23624794	10qA4	Mus musculus vanin 1 (Vnn1), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; Inflammation of prolonged duration (weeks or months) in which active inflammation, tissue destruction, and attempts at repair are proceeding simultaneously. Although it may follow acute inflammation, chronic inflammation frequently begins insidiously, as a low-grade, smoldering, often asymptomatic response [goid 2544] [evidence IDA]; Inflammation which comprises a rapid, short-lived, relatively uniform response to acute injury or antigenic challenge and is characterized by accumulations of fluid, plasma proteins, and granulocytic leukocytes. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response [goid 2526] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation in the thymus [goid 33089] [evidence IDA]	Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + 2-aminoethanethiol [goid 17159] [evidence IEA]; Interacting selectively with any glycosylphosphatidylinositol anchor. GPI anchors serve to attach membrane proteins to the lipid bilayer of cell membranes [goid 34235] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]	V-1	V-1
Mus musculus	MEEBO	ILMN_190291	ILMN_190291	AMBIONRNASPIKE4_EC15	AmbionRNASpike4_EC15						AmbionRNASpike4_EC15		ILMN_1230189	004060482	S	1	ACCGGGCCAGCGATCCGGCGAATCATCTTAAACGCTATAACCTGTATAAG										
Mus musculus	RefSeq	ILMN_219197	ILMN_219197	LINCR	NM_153408.2	NM_153408.2		214854	118130116	NM_153408.2	Lincr	NP_700457.1	ILMN_1229573	004640386	S	2172	GGAATAGTTCTGAGATCACAAAAAAGAGACCGCCATTATAATTGTGAGGG	1	-	36321808-36321857	1qB	Mus musculus lung-inducible neuralized-related C3HC4 RING domain protein (Lincr), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2010300P06Rik	2010300P06Rik
Mus musculus	RefSeq	ILMN_219197	ILMN_219197	LINCR	NM_153408.2	NM_153408.2		214854	118130116	NM_153408.2	Lincr	NP_700457.1	ILMN_1220349	001820630	S	1406	CCCAGTTTTATAAACCTGTGGCCAGAGGAGGTCAGAGAACCTCCAACCAG	1	-	36322574-36322623	1qB	Mus musculus lung-inducible neuralized-related C3HC4 RING domain protein (Lincr), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2010300P06Rik	2010300P06Rik
Mus musculus	RefSeq	ILMN_219197	ILMN_219197	LINCR	NM_153408.2	NM_153408.2		214854	118130116	NM_153408.2	Lincr	NP_700457.1	ILMN_2769971	005720494	S	1419	ACCTGTGGCCAGAGGAGGTCAGAGAACCTCCAACCAGTGAGTCCTGGAAG	1	-	36322561-36322610	1qB	Mus musculus lung-inducible neuralized-related C3HC4 RING domain protein (Lincr), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2010300P06Rik	2010300P06Rik
Mus musculus	RefSeq	ILMN_210664	ILMN_210664	SF4	NM_027481.2	NM_027481.2		70616	118130369	NM_027481.2	Sf4	NP_081757.1	ILMN_2607953	006940524	S	2196	GATCGGCCATCCTTGGACTATGAAATGTTCTGGCATCCATCTCTATCCTG	8	+	72595761-72595810	8qB3.3	Mus musculus splicing factor 4 (Sf4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730496N02Rik	5730496N02Rik
Mus musculus	RefSeq	ILMN_225506	ILMN_225506	USH2A	NM_021408.2	NM_021408.2		22283	84662723	NM_021408.2	Ush2a	NP_067383.2	ILMN_2781353	005960376	S	15221	AGAAACGAATGACCCCACTGAGCGTCTACCCACCAGGGGAAACCCATGTG	1	+	190781342-190781391	1qH6	Mus musculus Usher syndrome 2A (autosomal recessive, mild) homolog (human) (Ush2a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; An actin-based, cross-linked cellular protrusion on the apical surface of auditory and vestibular hair cells. Stereocilium bundles act as mechanosensory organelles by responding to fluid motion or fluid pressure changes [goid 32421] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]	Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IDA]	Mush2a; A930037M10Rik; Gm676; A930011D15Rik; Gm983	Mush2a; A930037M10Rik; Gm676; A930011D15Rik; Gm983
Mus musculus	RefSeq	ILMN_255253	ILMN_255253	FGF6	NM_010204.1	NM_010204.1		14177	112363075	NM_010204.1	Fgf6	NP_034334.1	ILMN_2958386	001780397	S	898	CACCTGAGGAGAGACAATACAGATGACTCTTGCAGCGTGTGGCCCTGTGC	6	+	126974402-126974451	6qF3	Mus musculus fibroblast growth factor 6 (Fgf6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Fgf-6	Fgf-6
Mus musculus	RefSeq	ILMN_186792	ILMN_255253	FGF6	NM_010204.1	NM_010204.1		14177	112363075	NM_010204.1	Fgf6	NP_034334.1	ILMN_2613997	001230484	S	978	GTGTCCGTGCATATCCACACATCTATTCGTAGATTCTCAGAGCAAAGGCA	6	+	126974482-126974531	6qF3	Mus musculus fibroblast growth factor 6 (Fgf6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Fgf-6	Fgf-6
Mus musculus	RefSeq	ILMN_208816	ILMN_224393	SYTL2	NM_001040085.1	NM_001040085.1		83671	91718888	NM_001040085.1	Sytl2	NP_001035174.1	ILMN_1239019	007320634	S	3691	CAGAATATAAATTGCTCAACTGTATTGGACTTCCTATGTATAATTTTCAT	7	+	97558850-97558899	7qE1	Mus musculus synaptotagmin-like 2 (Sytl2), transcript variant 2, mRNA. XM_985765 XM_985795 XM_986681 XM_986812 XM_986854	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IPI]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IDA]	Slp2-d; AI266830; Slp2-a; mKIAA1597; Slp2-c; Slp2; KIAA1597; Slp2-b	Slp2-d; AI266830; Slp2-a; mKIAA1597; Slp2-c; Slp2; KIAA1597; Slp2-b
Mus musculus	RefSeq	ILMN_222156	ILMN_222156	TLK1	NM_172664.2	NM_172664.2		228012	31982550	NM_172664.2	Tlk1	NP_766252.1	ILMN_2745450	003400307	S	3827	ATGTAAGTTGTCCATGGTGCAGACAACAGGCTATCCCTGCCAGCCGCCCC	2	-	70550619-70550668	2qC2	Mus musculus tousled-like kinase 1 (Tlk1), mRNA. XM_001002220 XM_982936 XM_982971 XM_983010 XM_983048 XM_983091 XM_983131	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	4930545J15Rik	4930545J15Rik
Mus musculus	RefSeq	ILMN_214225	ILMN_320967	4930461P20RIK	XM_001473469.1	XM_001473469.1		78244	149266337	XM_001473469.1	4930461P20Rik	XP_001473519.1	ILMN_2669088	004860630	S	1664	GGCTACTGGTCATGCAAGAGCACCTTCAGCCACAGCATCTTTAAACAGTG				15qA1	PREDICTED: Mus musculus RIKEN cDNA 4930461P20 gene (4930461P20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214225	ILMN_320967	4930461P20RIK	XM_001473469.1	XM_001473469.1		78244	149266337	XM_001473469.1	4930461P20Rik	XP_001473519.1	ILMN_1215080	004040048	S	959	CCAGGAGATGGAAGCAAGGTACGAGAAGGAGTTTGGAGATGGATCAGATG				15qA1	PREDICTED: Mus musculus RIKEN cDNA 4930461P20 gene (4930461P20Rik), mRNA.					
Mus musculus	MEEBO	ILMN_187478	ILMN_187478	BCL11A	scl40434.4.1_10				7710021	NM_016707	Bcl11a		ILMN_1234185	002970709	S	1	CTGCTCATGCTGGCGCACCACACTGTATTACGGTGCTCACAGATTCTAAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]		
Mus musculus	RefSeq	ILMN_220243	ILMN_220243	STARD6	NM_029019.3	NM_029019.3		170461	142352665	NM_029019.3	Stard6	NP_083295.1	ILMN_1215885	007320575	S	1160	ATAATGTGCCGTTAATACACTTTGACCATCTGAGCATGCTGTGCATTCGG	18	+	70660475-70660524	18qE2	Mus musculus StAR-related lipid transfer (START) domain containing 6 (Stard6), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence ISA]	AI644424; 4833424I06Rik; 4933429L05Rik; 1700011K09Rik; MGC107178	AI644424; 4833424I06Rik; 4933429L05Rik; 1700011K09Rik; MGC107178
Mus musculus	RefSeq	ILMN_196474	ILMN_225480	ZBTB9	NM_001005916.2	NM_001005916.2		474156	54607173	NM_001005916.2	Zbtb9	NP_001005916.1	ILMN_2524404	005560612	S	2666	CAATGGGACCGTACTGCTTTCTTCACCCACACTTGGTAGAGGTAGAGGGG	17	+	27113030-27113079	17qA3.3	Mus musculus zinc finger and BTB domain containing 9 (Zbtb9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	3930402F13Rik	3930402F13Rik
Mus musculus	RefSeq	ILMN_225480	ILMN_225480	ZBTB9	NM_001005916.2	NM_001005916.2		474156	54607173	NM_001005916.2	Zbtb9	NP_001005916.1	ILMN_2877464	003130072	S	2327	TGGATCTCTTCTAAGTTCAAGGCCAGCCAGGGCTACACATGGTGAGACCC	17	+	27112691-27112740	17qA3.3	Mus musculus zinc finger and BTB domain containing 9 (Zbtb9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	3930402F13Rik	3930402F13Rik
Mus musculus	RefSeq	ILMN_199803	ILMN_199803	LOC383028	XM_356808.1	XM_356808.1			38077511	XM_356808.1	LOC383028		ILMN_1237928	002340669	S	290	ACGGAAAGCCCACAGAGGGTCTGTTGATCGATGCCAAGAGTGATCATTCC										
Mus musculus	Riken	ILMN_203814	ILMN_203814	GSS	ri|9030204A06|PX00060F04|AK033435|3256					AK033435	Gss		ILMN_1253631	001820093	S	2867	AGACTTACCCAGCCCACAGCACGAACAGCGAATCCTGGAAGAGACATGCA							The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus [goid 46686] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione [goid 4363] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213894	ILMN_213894	EGR4	NM_020596.2	NM_020596.2		13656	118130510	NM_020596.2	Egr4	NP_065621.1	ILMN_1215713	004560681	S	1929	GGATGTACCGAGCCGGTCTCTTAAGAACTTTGTACAGCAAGTCTTTGGAT	6	-	85461237-85461286	6qC3	Mus musculus early growth response 4 (Egr4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NGF1-C; NGFI-C; pAT133; NGFIC	NGF1-C; NGFI-C; pAT133; NGFIC
Mus musculus	RefSeq	ILMN_189035	ILMN_252540	E330009J07RIK	NM_175528.4	NM_175528.4		243780	146198751	NM_175528.4	E330009J07Rik	NP_780737.1	ILMN_1233245	005890280	S	1900	TGTATGCTCTTCCTCCAGACACCCCTCCCAAATAGAGCAAACACGAAGTG				6qB1	Mus musculus RIKEN cDNA E330009J07 gene (E330009J07Rik), mRNA.				AI841796; mKIAA1147	AI841796; mKIAA1147
Mus musculus	RefSeq	ILMN_223803	ILMN_255421	5430435G22RIK	NM_145509.2	NM_145509.2		226421	134031992	NM_145509.2	5430435G22Rik	NP_663484.1	ILMN_2769490	004730524	S	2329	GCATTCGGCAGCACGATGAACATAAGGACCATATCTAAGGGTACGCAGCA	1	+	133609847-133609896	1qE4	Mus musculus RIKEN cDNA 5430435G22 gene (5430435G22Rik), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_224150	ILMN_224150	GPR4	scl33002.1.1_320				31342294	NM_175668	Gpr4		ILMN_1236099	002970142	S	2808	GGTTGGTCTGTGAAGACCAGATCCTGCTATCAGGGAGGTAGGACTAACAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210825	ILMN_210825	IBSP	scl27512.8.140_49				6680334	NM_008318	Ibsp		ILMN_2770088	003290041	S	1872	CCCCTCCCCCCATGAATGATTTGTCTCTGTGAAACATCTGGAACAAACTT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198146	ILMN_198146	LOC381087	XM_358502.1	XM_358502.1			38082155	XM_358502.1	LOC381087		ILMN_2530647	000290762	S	466	GTCTCCTAGTAGCCCAAGAAGGAAAATCAGCCGCTCACTCCTTGGCATCC										
Mus musculus	RefSeq	ILMN_211633	ILMN_211633	PEX5L	NM_021483.2	NM_021483.2		58869	142372154	NM_021483.2	Pex5l	NP_067458.1	ILMN_2617930	007560594	S	2093	GGATGTCCTCCTGAGAGCTTTCAATTTGGATCCTTGAAGGAAAAGAAGAC	3	-	32849577-32849590:32849591-32849626	3qA3	Mus musculus peroxisomal biogenesis factor 5-like (Pex5l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process by which a protein is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of proteins that do move away [goid 45185] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PXR2; TRIP8b; 1700016J08Rik	PXR2; TRIP8b; 1700016J08Rik
Mus musculus	RefSeq	ILMN_211851	ILMN_324827	LOC100047268	XM_001477774.1	XM_001477774.1		100047268	149249162	XM_001477774.1	LOC100047268	XP_001477824.1	ILMN_2770609	002470039	S	2145	GGAGACTTTTCGCTTAGCTCCTGGTCAGCTCTAGTGATTGTGCGCGCTTC					PREDICTED: Mus musculus similar to Immediate early response 5-like (LOC100047268), mRNA.					
Mus musculus	Riken	ILMN_202381	ILMN_202381	CDH23	ri|4930542A03|PX00034I07|AK016015|1055					AK016015	Cdh23		ILMN_1251238	003390215	S	879	GTACCAACCACAGCCCCGAAAATGGAGATGGAGGCCATGCGTCAGCAGTC						A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IDA]; The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence ISS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IMP]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_213270	ILMN_213270	SF3B2	NM_030109.1	NM_030109.1		319322	30794205	NM_030109.1	Sf3b2	NP_084385.1	ILMN_1239645	002190189	S	2770	GGACTCCCTAGGCTCGTCACTTCCTGTTCTTATTTTAGACTTGTTTTGTA	19	-	5274327-5274376	19qA	Mus musculus splicing factor 3b, subunit 2 (Sf3b2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SF3b145; SAP145; B230398H18Rik; 145kDa; SF3b1; 2810441F20Rik; SF3b150; 2610311M13Rik	SF3b145; SAP145; B230398H18Rik; 145kDa; SF3b1; 2810441F20Rik; SF3b150; 2610311M13Rik
Mus musculus	Riken	ILMN_204636	ILMN_204636	E130301I04RIK	ri|E130301I04|PX00092B04|AK053714|2961					AK053714	E130301I04Rik		ILMN_2566501	004610228	S	241	GAACACTGCAGACCTGCACTCGGGGCCCAGCTTTGTGGAGTCTCTCTTTG										
Mus musculus	RefSeq	ILMN_216246	ILMN_216246	DEFB50	NM_199067.1	NM_199067.1		387334	39979633	NM_199067.1	Defb50	NP_951022.1	ILMN_1251718	000130280	S	23	CCTAGGAGTTTCTCGTTCTCTCTGTTCCCTGTTCCCAGCTTACAACCATC	8	+	22934033-22934082	8qA2	Mus musculus defensin beta 50 (Defb50), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Pbd1; AY387658; Defb37	Pbd1; AY387658; Defb37
Mus musculus	RefSeq	ILMN_190626	ILMN_261317	PPP1R14C	NM_133485.2	NM_133485.2		76142	118130995	NM_133485.2	Ppp1r14c	NP_597844.1	ILMN_2632509	006380167	S	848	GACATTGATGATCTTCTTGATGCCAACAGCGAGGAGGAAAGAGCTTCGAA	10	-	6922970-6923019	10qA1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 14c (Ppp1r14c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA];  [goid 4865] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KEPI; 6330514J04Rik	KEPI; 6330514J04Rik
Mus musculus	RefSeq	ILMN_217013	ILMN_217013	RNF144A	NM_080563.3	NM_080563.3		108089	126517495	NM_080563.3	Rnf144a	NP_542130.1	ILMN_2678127	005690609	S	4734	TGTATAAAACAAAAATGCATGTGTCGGTCATGCGCACGTGCACACGTAGA	12	-	26991967-26992016	12qA2	Mus musculus ring finger protein 144A (Rnf144a), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI316797; Ubce7ip4; UIP4	AI316797; Ubce7ip4; UIP4
Mus musculus	Riken	ILMN_206943	ILMN_206943	SLC4A4	ri|D630019H21|PX00196P24|AK085387|2520					AK085387	Slc4a4		ILMN_1230297	006270196	S	2295	CACACACACACCCTGAGCTCTGTGTGTTGGCAAATGTATGAGTTCTGCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence TAS]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence ISS]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]	Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA];  [goid 5452] [evidence IEA];  [goid 15380] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + HCO3-(out) = Na+(in) + HCO3-(in) [goid 8510] [evidence ISS]		
Mus musculus	RefSeq	ILMN_232503	ILMN_232503	GM766	NM_001033417.1	NM_001033417.1		330440	85701918	NM_001033417.1	Gm766	NP_001028589.1	ILMN_3119924	002350450	A	540	GCGTTTTTAGAGCTGTTCCTCAAAGGAGATGACTGCGGCTGCCTCCCGTC	6	-	142752609-142752629:142755064-142755092	6qG3	Mus musculus gene model 766, (NCBI) (Gm766), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_232503	ILMN_232503	GM766	NM_001033417.1	NM_001033417.1		330440	85701918	NM_001033417.1	Gm766	NP_001028589.1	ILMN_3044544	006980398	I	1731	GTAGGCATGCTCTCCTGCAGACTGGGTCCTAACACTAATCCAGTTGCTGC	6	-	142742805-142742854	6qG3	Mus musculus gene model 766, (NCBI) (Gm766), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	MEEBO	ILMN_218608	ILMN_218608	6430628N08RIK	scl25082.2.1_7	XM_149458.1			20841477	XM_149458.1	6430628N08Rik		ILMN_2698013	003370070	S	1385	CCCTGGGATAAGCCAGATAGAGCACACCCATCCTTTCTGTCTGACAAAGG										
Mus musculus	Riken	ILMN_203260	ILMN_203260	KIF7	ri|9330171B17|PX00106C05|AK034273|2052					AK034273	Kif7		ILMN_1248248	005560605	S	1621	TTGGGACAAGTAAGTCACTACCACGGCCCATGCACAGCTAACTGATGGGC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200718	ILMN_200718	LOC384504	XM_357678.1	XM_357678.1			38085434	XM_357678.1	LOC384504		ILMN_1214437	005080670	S	144	CCCAGCAACTGTGGGATCTATGGGTGTGGTTATAAACGTCCCAGCAACTG										
Mus musculus	RefSeq	ILMN_207473	ILMN_207473	AV273951	NM_153130.2	NM_153130.2			46849738	NM_153130.2	AV273951		ILMN_2587770	002100504	I	342	TTGATGCGCATACACGTGGTGGTTCATTATGCTGCTGCACCTGTGTAGTG										
Mus musculus	RefSeq	ILMN_219043	ILMN_219043	CYP3A16	NM_007820.1	NM_007820.1		13114	6681116	NM_007820.1	Cyp3a16	NP_031846.1	ILMN_2703479	003890193	S	1611	AGTCTAAGAACATTGAACACTTTAGTCTCATCATGAATAAAAATCAAGAT	5	-	146197218-146197267	5qG2	Mus musculus cytochrome P450, family 3, subfamily a, polypeptide 16 (Cyp3a16), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	MGC130513	MGC130513
Mus musculus	RefSeq	ILMN_222254	ILMN_222254	ALDH3B2	XM_129134.7	XM_129134.7		621603	94405693	XM_129134.7	Aldh3b2	XP_129134.2	ILMN_2746937	004480047	S	1416	ATGTTGGAACGCACCAGCAGCGGTGGCTTTGGAGGCAACGATGGCTTCCT	19	+	3980704-3980753	19qA	PREDICTED: Mus musculus aldehyde dehydrogenase 3 family, member B2 (Aldh3b2), mRNA.					
Mus musculus	RefSeq	ILMN_222739	ILMN_222739	STOX1	XM_125685.5	XM_125685.5		216021	94388229	XM_125685.5	Stox1	XP_125685.3	ILMN_2754109	006940110	S	3196	CTTGTAGAAACTGGATAAGTGAAAGTCCTTGGAAGCTGTACATATATGCT	10	-	62122055-62122104	10qB4	PREDICTED: Mus musculus storkhead box 1 (Stox1), mRNA.					
Mus musculus	RefSeq	ILMN_218413	ILMN_251766	OLFR836	NM_146564.1	NM_146564.1		258557	22129514	NM_146564.1	Olfr836	NP_666775.1	ILMN_1240260	005050224	S	885	GAGGAACAGGAATATGAAAGAGGCATTGAAGAAGGTAATTGGTAGGAAGC	9	+	18926285-18926334	9qA2	Mus musculus olfactory receptor 836 (Olfr836), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129243; MGC129242; MOR152-3	MGC129243; MGC129242; MOR152-3
Mus musculus	MEEBO	ILMN_214548	ILMN_214548	CARD6	scl47427.4.1_24	XM_139295.2			28481365	XM_139295.2	Card6		ILMN_2649121	004780142	S	4187	CAAGATGAGGAAAGAGCAGGATCTAAGGATACATGAACTCACTGAGCCCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process that modulates an I-kappaB kinase/NF-kappaB induced cascade [goid 43122] [evidence ISA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_214164	ILMN_214164	DTL	NM_029766.2	NM_029766.2		76843	71061464	NM_029766.2	Dtl	NP_084042.1	ILMN_2644963	004180707	S	2238	CCCAGCTCCATGAGGAAGATATGTACATACTTTCGTAGAAAGACTCAAGA	1	-	193363158-193363207	1qH6	Mus musculus denticleless homolog (Drosophila) (Dtl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]		Ramp; 5730564G15Rik; 2810047L02Rik	Ramp; 5730564G15Rik; 2810047L02Rik
Mus musculus	RefSeq	ILMN_214164	ILMN_214164	DTL	NM_029766.2	NM_029766.2		76843	71061464	NM_029766.2	Dtl	NP_084042.1	ILMN_2724303	001690066	S	2124	GCCATAGCAGCCAAACGCAAGGCAGAAAATTCATCCCCAAGAAGTCCATC	1	-	193364634-193364683	1qH6	Mus musculus denticleless homolog (Drosophila) (Dtl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]		Ramp; 5730564G15Rik; 2810047L02Rik	Ramp; 5730564G15Rik; 2810047L02Rik
Mus musculus	MEEBO	ILMN_185325	ILMN_185325	C430046P22RIK	scl077624.1_148						C430046P22Rik		ILMN_1225440	002140286	S	1	CCTTCCCATTGTGGCAGTGAAAGAGTGAGACTCAAATCCCTCAGGATTGA										
Mus musculus	MEEBO	ILMN_193688	ILMN_193688	OLFR75-PS1	scl0258186.4_125						Olfr75-ps1		ILMN_2499518	002810743	S	15	CTTGGGAGGGCCCCTTGTGGTCATTCCGTTCTTACTCATTGTTGTGTCCT										
Mus musculus	RefSeq	ILMN_186044	ILMN_186044	TRIP6	NM_011639.2	NM_011639.2		22051	31981454	NM_011639.2	Trip6	NP_035769.1	ILMN_3009469	002120717	S	1299	TCTTGATGGCATCCCGTTCACAGTGGACGCCACCAGCCAGATCCACTGCA	5	-	137540455-137540504	5qG2	Mus musculus thyroid hormone receptor interactor 6 (Trip6), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186044	ILMN_186044	TRIP6	NM_011639.2	NM_011639.2		22051	31981454	NM_011639.2	Trip6	NP_035769.1	ILMN_3009463	006520110	S	1408	CCGGAACCAGGTCAGGAGGAGACGGTGAGAATTGTTGCTCTGGATCGAAG	5	-	137540099-137540148	5qG2	Mus musculus thyroid hormone receptor interactor 6 (Trip6), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197779	ILMN_250641	DPY19L4	NM_001081201.1	NM_001081201.1		381510	124487096	NM_001081201.1	Dpy19l4	NP_001074670.1	ILMN_1221069	000380563	S	1857	GCAGGAAGCCCACAGTTGATGGGTGTGATTAAGCTGTGTACTGGGTGGAC	4	-	11200208-11200257	4qA1	Mus musculus dpy-19-like 4 (C. elegans) (Dpy19l4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm1023	Gm1023
Mus musculus	RefSeq	ILMN_258079	ILMN_258079	TAS2R140	NM_021562.1	NM_021562.1		387616	51783972	NM_021562.1	Tas2r140	NP_067537.1	ILMN_2783117	002680309	S	663	CCCCAGCACCACAGCCCATATTAAGGCCCTGCAAATGATGGTCACCTTTC	6	-	133005099-133005148	6qG1	Mus musculus taste receptor, type 2, member 140 (Tas2r140), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence NAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence NAS]	Tas2r8; TRB3; Tas2r137; mTRB3; Tas2r13; Tas2r40; mt2r64; T2R40; T2r34; TRB5	Tas2r8; TRB3; Tas2r137; mTRB3; Tas2r13; Tas2r40; mt2r64; T2R40; T2r34; TRB5
Mus musculus	RefSeq	ILMN_212886	ILMN_258079	TAS2R140	NM_021562.1	NM_021562.1		387616	51783972	NM_021562.1	Tas2r140	NP_067537.1	ILMN_1235837	006250500	S	616	TGGACTCATCTGAAGAACATGCAACACAATGCCAAAGACTCCAGAGACCC	6	-	133005146-133005195	6qG1	Mus musculus taste receptor, type 2, member 140 (Tas2r140), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence NAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence NAS]	Tas2r8; TRB3; Tas2r137; mTRB3; Tas2r13; Tas2r40; mt2r64; T2R40; T2r34; TRB5	Tas2r8; TRB3; Tas2r137; mTRB3; Tas2r13; Tas2r40; mt2r64; T2R40; T2r34; TRB5
Mus musculus	RefSeq	ILMN_210367	ILMN_210367	CAR11	NM_009800.2	NM_009800.2		12348	31982809	NM_009800.2	Car11	NP_033930.1	ILMN_1248563	005670477	S	1283	ACGGTCGCTGAGACTCCCCAACGAGGATTACGCCCGCCTGTTCTGAGTTT	7	+	45572546-45572556:45572557-45572595	7qB4	Mus musculus carbonic anhydrase 11 (Car11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210002	ILMN_210002	RAD51L1	NM_009014.3	NM_009014.3		19363	142381729	NM_009014.3	Rad51l1	NP_033040.2	ILMN_1241582	003610220	S	1410	CAGCCACATTAATTAATTAAAGCCCACAATCCCCCTAGGGAGAGCAGGAG	12	+	80915229-80915278	12qC3	Mus musculus RAD51-like 1 (S. cerevisiae) (Rad51l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	mREC2; R51H2; AI553500; Rad51b	mREC2; R51H2; AI553500; Rad51b
Mus musculus	RefSeq	ILMN_212645	ILMN_212645	SENP5	NM_177103.3	NM_177103.3		320213	141802402	NM_177103.3	Senp5	NP_796077.1	ILMN_1259953	002320735	S	2117	CACCTGGAGGTCCACTGGTCTCTCATTACTGTGACACTCTCCAGCCGGAT	16	-	31968934-31968983	16qB2	Mus musculus SUMO/sentrin specific peptidase 5 (Senp5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	SMT3IP3; A730063F07Rik	SMT3IP3; A730063F07Rik
Mus musculus	RefSeq	ILMN_193666	ILMN_193666	V1RH10	NM_134235.1	NM_134235.1		171269	21717786	NM_134235.1	V1rh10	NP_598996.1	ILMN_2499326	002760048	S	417	TTTAATCAGTACAAACCTAATTCATTCCATTAAAAGTGCAAGTATAAATA	13	-	22919517-22919566	13qA3.1	Mus musculus vomeronasal 1 receptor, H10 (V1rh10), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_193666	ILMN_193666	V1RH10	NM_134235.1	NM_134235.1		171269	21717786	NM_134235.1	V1rh10	NP_598996.1	ILMN_2846084	000780296	S	837	TAGCCCCTTTGTGCTGATTCACAGGGATGGGCTTCTGGTTAAATTTTGGC	13	-	22919097-22919146	13qA3.1	Mus musculus vomeronasal 1 receptor, H10 (V1rh10), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_197287	ILMN_197287	LOC218368	XM_138750.2	XM_138750.2			38074979	XM_138750.2	LOC218368		ILMN_2527595	000460154	S	158	GAAATCAGCCAGCATGTAGAAGAATGGCTGACTATGTGACGTGTGAGAGC										
Mus musculus	RefSeq	ILMN_261804	ILMN_261804	KLC2	NM_008451.1	NM_008451.1		16594	6680577	NM_008451.1	Klc2	NP_032477.1	ILMN_2981767	003060347	S	2495	CCTCCCAAAAGGGGTCCCTAGACCTCTTCGCCTGGTCTTGGAGGGATCTA	19	-	5108054-5108103	19qA	Mus musculus kinesin light chain 2 (Klc2), mRNA.	A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IPI]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IMP]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	8030455F02Rik; AW212649	8030455F02Rik; AW212649
Mus musculus	RefSeq	ILMN_209597	ILMN_250082	OLFR700	NM_146600.1	NM_146600.1		258593	22129448	NM_146600.1	Olfr700	NP_666811.1	ILMN_1219081	000450367	S	642	CCTTTCCTCTTATACACTAATCCTGCTCACTGTGCTCCACATGCCTTCAC	7	-	113949283-113949332	7qE3	Mus musculus olfactory receptor 700 (Olfr700), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123707; MOR283-4; MGC123754	MGC123707; MOR283-4; MGC123754
Mus musculus	Riken	ILMN_206765	ILMN_206765	D930049F02RIK	ri|D930049F02|PX00203F20|AK086749|2168					AK086749	D930049F02Rik		ILMN_1233004	005700138	S	1794	GGCAAGGTCTGCTGTTCCCAGCTTTCCTTACATTGAGACCAGGGGATGGC										
Mus musculus	RefSeq	ILMN_201093	ILMN_201093	LOC384767	XM_357854.1	XM_357854.1			38089088	XM_357854.1	LOC384767		ILMN_2541052	006900259	S	266	AAGCAACCCTCCAGGTGCTGATGGCTCTTGAAAATTGTGGTACCCTGCGG										
Mus musculus	RefSeq	ILMN_208700	ILMN_208700	TENC1	NM_153533.2	NM_153533.2		209039	119372287	NM_153533.2	Tenc1	NP_705761.2	ILMN_2744164	000060328	S	3350	AACAGCCGTCGCCACCAGCCAGAAGCACCAATCAACATGTCACCTTTGCA	15	+	101943583-101943632	15qF3	Mus musculus tensin like C1 domain-containing phosphatase (Tenc1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C1-ten	C1-ten
Mus musculus	RefSeq	ILMN_208700	ILMN_208700	TENC1	NM_153533.2	NM_153533.2		209039	119372287	NM_153533.2	Tenc1	NP_705761.2	ILMN_1249978	001340411	S	4620	CCACACAGAGACCAGAGTGGGGTCACATAAACAGAGGGAAAAAGAGAGTC	15	+	101946745-101946794	15qF3	Mus musculus tensin like C1 domain-containing phosphatase (Tenc1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C1-ten	C1-ten
Mus musculus	RefSeq	ILMN_223605	ILMN_208700	TENC1	NM_153533.2	NM_153533.2		209039	119372287	NM_153533.2	Tenc1	NP_705761.2	ILMN_2766408	003170296	S	62	TCAGGCCCTGCAGCCAAGAGTCCAGCCAGCCAGACACCATGAAGTCCAGC	15	+	101933480-101933517:101933518-101933529	15qF3	Mus musculus tensin like C1 domain-containing phosphatase (Tenc1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C1-ten	C1-ten
Mus musculus	RefSeq	ILMN_200768	ILMN_200768	LOC384549	XM_357704.1	XM_357704.1			38085976	XM_357704.1	LOC384549		ILMN_2539934	002260768	S	971	CTGAAAGCCCTAAAGGCACTGTCTCTCTGCCAAGCTCTGCCTATCAGGAC										
Mus musculus	RefSeq	ILMN_219645	ILMN_219645	NDUFS8	NM_144870.4	NM_144870.4		225887	142364966	NM_144870.4	Ndufs8	NP_659119.2	ILMN_2711734	005890010	S	760	GCCCCAACTTCGAGTTCTCCACCGAGACACACGAGGAGTTGCTGTACAAC	19	-	3909023-3909072	19qA	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 8 (Ndufs8), mRNA.	The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	TYKY; MGC37950; BC021616; MGC101957	TYKY; MGC37950; BC021616; MGC101957
Mus musculus	RefSeq	ILMN_217524	ILMN_234983	PDCD2L	NM_026549.3	NM_026549.3		68079	146134985	NM_026549.3	Pdcd2l	NP_080825.1	ILMN_2684300	003710079	S	1021	CTGGCCTCCAAATCAGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAG				7qB1	Mus musculus programmed cell death 2-like (Pdcd2l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			6030457N17Rik; MGC144595	6030457N17Rik; MGC144595
Mus musculus	RefSeq	ILMN_199372	ILMN_199372	NSCCN1	NM_010940.1	NM_010940.1			6754891	NM_010940.1	Nsccn1		ILMN_1222662	000730678	S	2219	CGTGGGCTGGATTGACACTTGTAGTTAGAATCCTACTTTTCTTGAAGTTT										
Mus musculus	RefSeq	ILMN_199372	ILMN_199372	NSCCN1	NM_010940.1	NM_010940.1			6754891	NM_010940.1	Nsccn1		ILMN_2535014	003850152	S	2320	TGTTGAACCAAGGCTTTTACATTCCAGGCCAAGCACTACTGCCTCCCAAT										
Mus musculus	Riken	ILMN_204202	ILMN_204202	D530007H06RIK	ri|D530007H06|PX00088P07|AK052561|2182					AK052561	D530007H06Rik		ILMN_2563161	005220681	S	251	CCTAGCGGTACATTGCGGTCACCAGGCAATATGTCAGAGTCACTTGGAGA										
Mus musculus	RefSeq	ILMN_215185	ILMN_215185	RETNLG	NM_181596.3	NM_181596.3		245195	142361567	NM_181596.3	Retnlg	NP_853627.1	ILMN_2656504	007160711	S	189	AACAAAGACTTTCTCCTGTACTAGTATCACGGCTTCAGGCAGACTGGCCT	16	+	48873760-48873809	16qB5	Mus musculus resistin like gamma (Retnlg), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fizz3; Relmg; Xcp1	Fizz3; Relmg; Xcp1
Mus musculus	RefSeq	ILMN_210693	ILMN_210693	KIRREL2	NM_172898.3	NM_172898.3		243911	146198539	NM_172898.3	Kirrel2	NP_766486.1	ILMN_2629246	001300022	S	3043	GGAACTAGGGATATGGATGGAAGTAGTAGAGAAGATATATGACCATCTGC				7qB1	Mus musculus kin of IRRE like 2 (Drosophila) (Kirrel2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			NEPH3; NLG1; C330019F22Rik	NEPH3; NLG1; C330019F22Rik
Mus musculus	RefSeq	ILMN_217658	ILMN_217658	KLHL2	NM_178633.2	NM_178633.2		77113	110347552	NM_178633.2	Klhl2	NP_848748.2	ILMN_2686047	004830240	S	2389	GTTGAGGGGTGAAACTGCTGGCTTTTATAAGTATCTTTGATTACATGACT	8	-	67218710-67218759	8qB3.1	Mus musculus kelch-like 2, Mayven (Drosophila) (Klhl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]	Mav; AU020744; KIAA4249; ABP-KELCH; 6030411N21Rik; mKIAA4249	Mav; AU020744; KIAA4249; ABP-KELCH; 6030411N21Rik; mKIAA4249
Mus musculus	RefSeq	ILMN_198883	ILMN_198883	LOC234486	XM_134462.2	XM_134462.2			38089397	XM_134462.2	LOC234486		ILMN_2533263	000050220	S	575	CCACTGCAGGTGCTGCCGGCGACAGCCAAGCACATCTTGACAACGCTCAT										
Mus musculus	RefSeq	ILMN_212284	ILMN_233973	4930458L03RIK	NM_030047.1	NM_030047.1		78124	56961609	NM_030047.1	4930458L03Rik	NP_084323.1	ILMN_2624729	006290551	S	124	GGGCTCTACCACCTGTTACTTCCTTTTCTTGAGAGTCATCTGTCTTCACC	13	+	65018896-65018945	13qB3	Mus musculus RIKEN cDNA 4930458L03 gene (4930458L03Rik), mRNA.				Vad1.3	Vad1.3
Mus musculus	Riken	ILMN_203827	ILMN_203827	A230069J01RIK	ri|A230069J01|PX00129C13|AK038865|1238					AK038865	A230069J01Rik		ILMN_1215917	000380053	S	996	GTTTGGTATCAGGCTGGTGAGATGGTCAGTTGGCATAGGTACTTGCCACC										
Mus musculus	Riken	ILMN_206967	ILMN_206967	4930554N06RIK	ri|4930554N06|PX00640H21|AK076919|396					AK076919	4930554N06Rik		ILMN_1257390	004120364	S	49	TGCAATGGGAGAGGGCCACGGAGACACTTTCGAGGGGGTGAGCACAGACC										
Mus musculus	MEEBO	ILMN_188701	ILMN_188701	4831403C07RIK	scl00380613.1_311						4831403C07Rik		ILMN_2454970	006510674	S	8	TCCAAGTCCTACACTAAGGCCAGGAGCTACCATGCCCAGTTTCTACCTCT										
Mus musculus	MEEBO	ILMN_216439	ILMN_216439	1500002O10RIK	scl19164.4.1_99	XM_149157.1			20837121	XM_149157.1	1500002O10Rik		ILMN_1237615	007210731	S	479	CACCTCTTAGGGAAGGAATCACCTTAACAGCACATGAGGGGACCTTACAC										
Mus musculus	RefSeq	ILMN_210515	ILMN_210515	PLCE1	NM_019588.2	NM_019588.2		74055	134053942	NM_019588.2	Plce1	NP_062534.2	ILMN_1227553	000940519	S	7137	TAAAGCAGGGACACCCAGGCCATTGCCCGGAGCATTACAGGTGGAGAGGC	19	+	38857218-38857267	19qC3	Mus musculus phospholipase C, epsilon 1 (Plce1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	4933403A21Rik; mKIAA1516; Plce	4933403A21Rik; mKIAA1516; Plce
Mus musculus	RefSeq	ILMN_222714	ILMN_222714	1700027D21RIK	NM_029661.1	NM_029661.1		76573	21313251	NM_029661.1	1700027D21Rik	NP_083937.1	ILMN_1255463	006580431	S	1045	CCTGGGTGACTCCCTGCTACTGCTGAATTGCCTATGTGAGCTTTCCAAGG	10	+	76026697-76026746	10qC1	Mus musculus RIKEN cDNA 1700027D21 gene (1700027D21Rik), mRNA.				AA062323; 1700022B01Rik	AA062323; 1700022B01Rik
Mus musculus	RefSeq	ILMN_197180	ILMN_197180	LOC241251	XM_140834.3	XM_140834.3			38074476	XM_140834.3	LOC241251		ILMN_2527202	003850746	S	667	GCACAGGCCGTCACTTGTGAACTAGCACAGGCTGTCACGTGTGAACTAGC										
Mus musculus	RefSeq	ILMN_185255	ILMN_256044	WDR5B	NM_027113.2	NM_027113.2		69544	42476275	NM_027113.2	Wdr5b	NP_081389.1	ILMN_2425488	002350653	S	1534	CTGGCTTTCCCAGGGGGGTAAGGTTTTTGGAATATCTGGAAAGGTGACAC	16	+	36042809-36042858	16qB3	Mus musculus WD repeat domain 5B (Wdr5b), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		AI606931; 2310009C03Rik	AI606931; 2310009C03Rik
Mus musculus	RefSeq	ILMN_189166	ILMN_251058	AK1	NM_021515.2	NM_021515.2		11636	118130459	NM_021515.2	Ak1	NP_067490.1	ILMN_2667805	005690092	S	1667	GAGCATGCAGATTAAGGAGTGTGAGCTGCCATAGACAAGGATGTGGGATC	2	+	32490205-32490254	2qB	Mus musculus adenylate kinase 1 (Ak1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IDA]	B430205N08Rik; Ak-1	B430205N08Rik; Ak-1
Mus musculus	Riken	ILMN_201800	ILMN_201800	2310057K05RIK	ri|2310057K05|ZX00059N13|AK009963|901					AK009963	2310057K05Rik		ILMN_1257434	000270598	S	817	GAGTCGCGAACGGCTTCTTGGCTATGATGCGAGTCCCCGCTTTCCTGAGA										
Mus musculus	RefSeq	ILMN_260684	ILMN_260684	BC013491	NM_001033243.1	NM_001033243.1		211535	85701753	NM_001033243.1	BC013491	NP_001028415.1	ILMN_3056417	001940246	I	170	TGGAGTTGGAAAGGCGGGCATACAGCAAGGAAGTTCATCAGCGCCTCAGG	7	+	45796609-45796658	7qB4	Mus musculus cDNA sequence BC013491 (BC013491), mRNA. XM_925312					
Mus musculus	RefSeq	ILMN_260684	ILMN_260684	BC013491	NM_001033243.1	NM_001033243.1		211535	85701753	NM_001033243.1	BC013491	NP_001028415.1	ILMN_3133238	005270400	A	2109	CTCTACTAGCAAGGACTCCAGGGGCTACAACTAGGGCTGCGGGTCCCTTC	7	+	45816654-45816686:45816687-45816703	7qB4	Mus musculus cDNA sequence BC013491 (BC013491), mRNA. XM_925312					
Mus musculus	MEEBO	ILMN_215733	ILMN_215733	4930449E01RIK	scl45998.3.1_24	XM_127874.2			28480823	XM_127874.2	4930449E01Rik		ILMN_2662970	005860360	S	529	GCTGGAAGGAAGCAGAACTTACCCATCAAAGCTCTTCCCATCACCGCCAT										
Mus musculus	MEEBO	ILMN_211247	ILMN_211247	2610005M20RIK	scl0070308.1_123	XM_150180.1			20888276	XM_150180.1	2610005M20Rik		ILMN_1214136	000580398	S	1414	GGTGTGTGCTAACACCTGGTTTGGCTAGACCTCTGGATTGTCTCAGGCCT										
Mus musculus	RefSeq	ILMN_215823	ILMN_215823	IFLTD1	NM_028742.2	NM_028742.2		74071	118130524	NM_028742.2	Ifltd1	NP_083018.1	ILMN_1226083	001740296	S	1294	CGTACAGCTCTCTGATTGACTCACATGACTCGGACATTTCCGAAAGCAGT	6	-	145353021-145353070	6qG3	Mus musculus intermediate filament tail domain containing 1 (Ifltd1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Lmna-rs1; Lmna1; 4933403M22Rik; AI482300	Lmna-rs1; Lmna1; 4933403M22Rik; AI482300
Mus musculus	RefSeq	ILMN_212380	ILMN_212380	SLC45A1	NM_173774.3	NM_173774.3		242773	75709221	NM_173774.3	Slc45a1	NP_776135.2	ILMN_3163567	002750424	A	2145	ACTACCAGAGTAAGAAGTTTGCAGGGTCCAGTGCGGATGGCACACGGCGT	4	-	150003873-150003906:150005027-150005042	4qE2	Mus musculus solute carrier family 45, member 1 (Slc45a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	C230078B22; Dnb5	C230078B22; Dnb5
Mus musculus	RefSeq	ILMN_207333	ILMN_228113	MAST4	XM_897003.2	XM_897003.2		328329	94395615	XM_897003.2	Mast4	XP_902096.1	ILMN_1225083	004230561	S	1776	GATTCCCCATGCTAAGCCTATCGCGCCGGCTCCTATTTGGACTCAGTGTC	13	-	104453661-104453710	13qD1	PREDICTED: Mus musculus microtubule associated serine/threonine kinase family member 4, transcript variant 4 (Mast4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218297	ILMN_218297	AADACL1	NM_178772.2	NM_178772.2		320024	31343473	NM_178772.2	Aadacl1	NP_848887.1	ILMN_2949021	006960369	S	4181	GCAGCGCATAGTGAATGCCTCTTGGTGTTTTCACGTTCGTCTGTGAGGAC	3	+	27435771-27435820	3qA3	Mus musculus arylacetamide deacetylase-like 1 (Aadacl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 17171] [evidence IDA]; Interacting selectively with phosphate [goid 42301] [evidence IDA]	CPO-BP; B230106I24Rik	CPO-BP; B230106I24Rik
Mus musculus	RefSeq	ILMN_215612	ILMN_240209	SPNB3	NM_021287.1	NM_021287.1		20743	55926126	NM_021287.1	Spnb3	NP_067262.1	ILMN_2661588	000940041	S	7968	CACAGCTAGGGTGTGCCATCCACCATTCAGTTCTTTGCCTCTGGGATCAG	19	+	4752085-4752134	19qA	Mus musculus spectrin beta 3 (Spnb3), mRNA.			Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	mKIAA0302; MGC99874; KIAA0302	mKIAA0302; MGC99874; KIAA0302
Mus musculus	RefSeq	ILMN_189193	ILMN_234097	5730590G19RIK	NM_029835.1	NM_029835.1		77011	78354982	NM_029835.1	5730590G19Rik	NP_084111.1	ILMN_2459146	001820301	S	748	GAGGTTATGATCGCCCGAAATATCACCTTGTACTGGGTGGACACCACCGA	7	+	86805829-86805878	7qD3	Mus musculus RIKEN cDNA 5730590G19 gene (5730590G19Rik), mRNA.				BC028450; Lrrk1	BC028450; Lrrk1
Mus musculus	RefSeq	ILMN_193844	ILMN_225927	4930503B20RIK	NM_029144.3	NM_029144.3		75015	142379895	NM_029144.3	4930503B20Rik	NP_083420.2	ILMN_2500943	006370162	S	911	TGGGGCCTGCTCTGAAAATCTATGAATATCATGTAAAACCTCTTCAGACC	3	-	146309276-146309325	3qH2	Mus musculus RIKEN cDNA 4930503B20 gene (4930503B20Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700095G21Rik; 1700013A07Rik; 4930483N21Rik	1700095G21Rik; 1700013A07Rik; 4930483N21Rik
Mus musculus	RefSeq	ILMN_256960	ILMN_256960	GIMAP1	NM_008376.3	NM_008376.3		16205	56549084	NM_008376.3	Gimap1	NP_032402.2	ILMN_3141165	000150433	A	1154	TGGCATCAACTTTGCTAAGGTTCTGTTGTGTGAGGAGCGGGTGTGGCGGC	6	+	48693443-48693492	6qB2.3	Mus musculus GTPase, IMAP family member 1 (Gimap1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	imap; IAP38; Imap38	imap; IAP38; Imap38
Mus musculus	RefSeq	ILMN_202193	ILMN_310517	1700120B22RIK	XM_001472938.1	XM_001472938.1		641387	149261239	XM_001472938.1	1700120B22Rik	XP_001472988.1	ILMN_2547729	000870594	S	1044	GGAAGGGCTGGCGGTTCCGGAACAGTGTTGGCTCACGTTTTCAGCTAACT				10qB4	PREDICTED: Mus musculus RIKEN cDNA 1700120B22 gene (1700120B22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213222	ILMN_310517	1700120B22RIK	XM_001472938.1	XM_001472938.1		641387	149261239	XM_001472938.1	1700120B22Rik	XP_001472988.1	ILMN_2634870	005080040	S	788	AGAGACCCGGTGAGTCGTTGCCCCCCGTGGGTTCGGGGTAGTGTGACGGA				10qB4	PREDICTED: Mus musculus RIKEN cDNA 1700120B22 gene (1700120B22Rik), mRNA.					
Mus musculus	MEEBO	ILMN_196297	ILMN_196297	STAM2	scl19277.14_282				31543774	NM_019667	Stam2		ILMN_2523446	006650152	S	20	TTCTTCACCCGCCCCCCCAACATTGCAAAATGGGGGAAAGATGGCCTTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_201504	ILMN_201504	LOC382194	XM_356302.1	XM_356302.1			38095317	XM_356302.1	LOC382194		ILMN_2542535	003140068	S	328	CCAGAAGGCCTCAGGAAAAACTGTCTGGAAGAGTGGACCAAGGCAGCTGG										
Mus musculus	RefSeq	ILMN_190108	ILMN_231181	1700016L21RIK	XM_974436.2	XM_974436.2		72208	149234124	XM_974436.2	1700016L21Rik	XP_979530.1	ILMN_1255437	001240204	S	274	GTGGGAATGAATGGGTTCAATCTGGGGTGTCTCATAGATGCTTAAGCAGC	1	+	80472035-80472079:80472080-80472084	1qC4	PREDICTED: Mus musculus RIKEN cDNA 1700016L21 gene (1700016L21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209853	ILMN_209853	ARF4	NM_007479.3	NM_007479.3		11843	118131062	NM_007479.3	Arf4	NP_031505.1	ILMN_2599834	005260730	S	1730	AGTAAACTTAGCCATGGGTTATCATGTGCATTAAAGTAAGGTGCACTATG	14	+	27476432-27476481	14qA3	Mus musculus ADP-ribosylation factor 4 (Arf4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence TAS]	AA407803	AA407803
Mus musculus	RefSeq	ILMN_191435	ILMN_191435	UBAP2L	NM_028475.1	NM_028475.1		74383	33239420	NM_028475.1	Ubap2l	NP_082751.1	ILMN_1223378	004560328	S	2	GTGAATGTCAGTGTGAATGCCTCGGCTACCCCTTTCCAACAGCCAAGTGG	3	-	89856336-89856385	3qF1	Mus musculus ubiquitin associated protein 2-like (Ubap2l), transcript variant 1, mRNA.				mKIAA0144; 3110083O19Rik; C77168; MGC25504; A430103N23Rik; Nice-4; 4932431F02Rik	mKIAA0144; 3110083O19Rik; C77168; MGC25504; A430103N23Rik; Nice-4; 4932431F02Rik
Mus musculus	RefSeq	ILMN_191435	ILMN_191435	UBAP2L	NM_028475.1	NM_028475.1		74383	33239420	NM_028475.1	Ubap2l	NP_082751.1	ILMN_3074817	006420014	I	827	TTTCATTGGGGTTGAGGGGTCAAATTATCCCCGAAAATTTGAGACTGCTC	3	-	89835235-89835284	3qF1	Mus musculus ubiquitin associated protein 2-like (Ubap2l), transcript variant 1, mRNA.				mKIAA0144; 3110083O19Rik; C77168; MGC25504; A430103N23Rik; Nice-4; 4932431F02Rik	mKIAA0144; 3110083O19Rik; C77168; MGC25504; A430103N23Rik; Nice-4; 4932431F02Rik
Mus musculus	RefSeq	ILMN_191435	ILMN_191435	UBAP2L	NM_028475.1	NM_028475.1		74383	33239420	NM_028475.1	Ubap2l	NP_082751.1	ILMN_3153869	006650064	A	3281	TCTGACCCCACATCAGCAGCCACACTCTCAGATCCTTCACCATCACCTGC	3	-	89806214-89806263	3qF1	Mus musculus ubiquitin associated protein 2-like (Ubap2l), transcript variant 1, mRNA.				mKIAA0144; 3110083O19Rik; C77168; MGC25504; A430103N23Rik; Nice-4; 4932431F02Rik	mKIAA0144; 3110083O19Rik; C77168; MGC25504; A430103N23Rik; Nice-4; 4932431F02Rik
Mus musculus	RefSeq	ILMN_211768	ILMN_211768	POP7	NM_028753.1	NM_028753.1		74097	13899214	NM_028753.1	Pop7	NP_083029.1	ILMN_2619362	001410358	S	325	GCTCCTGGACGGAGGCACTAGGGGGCAGAACGCATGCACTGAAATCTACA	5	-	137943574-137943622:137943298-137943298	5qG2	Mus musculus processing of precursor 7, ribonuclease P family, (S. cerevisiae) (Pop7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]	0610037N12Rik; Rpp20; AI852017	0610037N12Rik; Rpp20; AI852017
Mus musculus	RefSeq	ILMN_218431	ILMN_218431	OLFR577	NM_147109.1	NM_147109.1		259113	22128796	NM_147109.1	Olfr577	NP_667320.1	ILMN_1248452	005560364	S	769	CCCATGATAGGATTGTCTGTAATCCACCGCTTTGGGAAACAGGCCCCCCA	7	-	110121686-110121735	7qE3	Mus musculus olfactory receptor 577 (Olfr577), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR7-2	MOR7-2
Mus musculus	RefSeq	ILMN_209668	ILMN_209668	RIC8	NM_053194.4	NM_053194.4		101489	118131149	NM_053194.4	Ric8	NP_444424.1	ILMN_1244025	003610367	S	2837	CAGGAGGAGAACACCCACATAACCTGAAGTTTGTCAACACTCACTATCCC	7	+	148049500-148049549	7qF5	Mus musculus resistance to inhibitors of cholinesterase 8 homolog (C. elegans) (Ric8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence ISO]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]	Interacting selectively with a G-protein alpha subunit. The alpha subunit binds a guanine nucleotide [goid 1965] [evidence ISO]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]	AI114950; RIC-8	AI114950; RIC-8
Mus musculus	RefSeq	ILMN_215301	ILMN_215301	STAT2	NM_019963.1	NM_019963.1		20847	9910571	NM_019963.1	Stat2	NP_064347.1	ILMN_2657822	006220594	S	3973	ACTTGTGGGAAACGAATGTGAGGACCTGCACTGTGGCCGTTCTCTAACGG	10	+	127729484-127729533	10qD3	Mus musculus signal transducer and activator of transcription 2 (Stat2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AW496480; 1600010G07Rik	AW496480; 1600010G07Rik
Mus musculus	RefSeq	ILMN_221027	ILMN_221027	ENPP5	NM_032003.1	NM_032003.1		83965	14030778	NM_032003.1	Enpp5	NP_114392.1	ILMN_1217118	004850082	S	2314	CATTAGTATTGTTCCCTGTGGATGAGTCTAGTCCTGACTCCGTGATGAGG	17	+	44223312-44223361	17qB3	Mus musculus ectonucleotide pyrophosphatase/phosphodiesterase 5 (Enpp5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [evidence ISA]	mKIAA4152; KIAA4152; D17Abb1e; AW061004	mKIAA4152; KIAA4152; D17Abb1e; AW061004
Mus musculus	RefSeq	ILMN_213009	ILMN_213009	MARVELD3	NM_028584.2	NM_028584.2		73608	47059473	NM_028584.2	Marveld3	NP_082860.2	ILMN_2632585	004590110	S	2043	GCCAGACAACTTCACGGGCTAGATTACCTGTTGAATTATGGCTTGGGACC	8	-	112477134-112477183	8qD3	Mus musculus MARVEL (membrane-associating) domain containing 3 (Marveld3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI642133; Mrvldc3; MARVD3; 1810006A16Rik	AI642133; Mrvldc3; MARVD3; 1810006A16Rik
Mus musculus	RefSeq	ILMN_220839	ILMN_220839	MORC1	NM_010816.1	NM_010816.1		17450	7106358	NM_010816.1	Morc1	NP_034946.1	ILMN_1226966	003170373	S	2666	CTACATGGCTCAGTATGAGAAAAGACTCAAGAGGAAAATGCAGTCCATTG	16	+	48627037-48627086	16qB5	Mus musculus microrchidia 1 (Morc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Morc	Morc
Mus musculus	RefSeq	ILMN_197929	ILMN_242106	PARL	NM_001005767.3	NM_001005767.3		381038	146198583	NM_001005767.3	Parl	NP_001005767.1	ILMN_1212625	005700521	S	523	CCAGCGGACTGTGACAGGCATCATAGCTGCGAATGCCCTCGTCTTCTGCT				16qA3	Mus musculus presenilin associated, rhomboid-like (Parl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PSENIP2; Psarl; D16Ertd607e; PSARL1; PRO2207	PSENIP2; Psarl; D16Ertd607e; PSARL1; PRO2207
Mus musculus	RefSeq	ILMN_219629	ILMN_219629	SFRP4	NM_016687.2	NM_016687.2		20379	141803390	NM_016687.2	Sfrp4	NP_057896.1	ILMN_1234879	003310341	S	1582	GTGCATACTGTGTAAGACCTCCTGTTTTAAGAGTTTGACCTAAAATGTAC	13	+	19724524-19724573	13qA2	Mus musculus secreted frizzled-related protein 4 (Sfrp4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_221082	ILMN_221082	4921517L17RIK	scl20029.13.1_36	XM_130609.2			38075214	XM_130609.2	4921517L17Rik		ILMN_2730831	002100687	S	1799	CTTTCGGAAGGATTTGCTGCGGTTACTGGTGGAGCCCCTCAATAAGTCAC										
Mus musculus	RefSeq	ILMN_215345	ILMN_215345	ELMO1	NM_198093.2	NM_198093.2		140580	37693522	NM_198093.2	Elmo1	NP_932761.1	ILMN_1237174	003800195	S	84	CCTCTGGTCTTCCGGCACACTGTCCTACTGGGGCACGACTCTAAGTCATA	13	+	20565045-20565094	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_215345	ILMN_215345	ELMO1	NM_198093.2	NM_198093.2		140580	37693522	NM_198093.2	Elmo1	NP_932761.1	ILMN_2658407	006760228	S	1873	CCTGCTACAGCCCAGGTTTTCCAGGGTGGTCAAGCTGTCAGACATCCAAG	13	+	20698099-20698148	13qA2	Mus musculus engulfment and cell motility 1, ced-12 homolog (C. elegans) (Elmo1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence ISS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IDA]; Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001	6330578D22Rik; mKIAA0281; CED-12; KIAA0281; C230095H21Rik; AI173001
Mus musculus	RefSeq	ILMN_221589	ILMN_221589	FTSJ3	NM_025310.2	NM_025310.2		56095	27228962	NM_025310.2	Ftsj3	NP_079586.1	ILMN_1247468	006370392	S	2507	GGTAGTGGACTCTCGGATGAAGAAGGATCAGAGAGCACAACAACGGAAGG	11	-	106110766-106110815	11qE1	Mus musculus FtsJ homolog 3 (E. coli) (Ftsj3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA537063; AU045295; Epcs3; C79843; D11Ertd400e	AA537063; AU045295; Epcs3; C79843; D11Ertd400e
Mus musculus	RefSeq	ILMN_223038	ILMN_223038	RMI1	NM_028904.2	NM_028904.2		74386	31541983	NM_028904.2	Rmi1	NP_083180.2	ILMN_1249493	002370255	S	3447	GACTATTTCCTTTTGCTGTACTAGATTATGTTTGGGAGATGTACTTTTAA	13	+	58512378-58512427	13qB1	Mus musculus RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) (Rmi1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			4932432N11Rik; C79893	4932432N11Rik; C79893
Mus musculus	Riken	ILMN_204849	ILMN_204849	PEX13	ri|A130057L17|PX00123F02|AK037872|2295					AK037872	Pex13		ILMN_1254990	004280215	S	1936	GTGGAAGGGAAGAGAACCTTTTGTGCGTCTGTTGAGTTGCTCCACCTACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence ISO]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process by which a complex formed of a peroxisome targeting sequence (PTS) receptor bound to a PTS-bearing protein docks with translocation machinery in the preoxisomal membrane [goid 16560] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; Pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway [goid 1561] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The microtubule-based process by which a peroxisome is transported to, and/or maintained in, a specific location. A peroxisome is a small membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 60152] [evidence IMP]	Interacting selectively with a peroxisomal targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome [goid 268] [evidence TAS]		
Mus musculus	RefSeq	ILMN_205360	ILMN_213543	FERMT1	NM_198029.2	NM_198029.2		241639	124487314	NM_198029.2	Fermt1	NP_932146.2	ILMN_1251031	005050152	S	1790	CCCTGGAAGGCGGGAAGGCCGACAACACTTTGGAGGACATAACTGACATC	2	-	132748564-132748582:132750693-132750723	2qF2	Mus musculus fermitin family homolog 1 (Drosophila) (Fermt1), mRNA. XM_894922 XM_902117 XM_902119 XM_902122 XM_918304 XM_925626 XM_925627 XM_925628 XM_925629	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-308A23.1; Kindlin-1	RP23-308A23.1; Kindlin-1
Mus musculus	RefSeq	ILMN_213543	ILMN_213543	FERMT1	NM_198029.2	NM_198029.2		241639	124487314	NM_198029.2	Fermt1	NP_932146.2	ILMN_1234099	002510220	S	4930	GGAGTTGGCTCCCAACGTTATGCAGTTTTAGGTAGCATTTCTCCCGTGGT	2	-	132730190-132730239	2qF2	Mus musculus fermitin family homolog 1 (Drosophila) (Fermt1), mRNA. XM_894922 XM_902117 XM_902119 XM_902122 XM_918304 XM_925626 XM_925627 XM_925628 XM_925629	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-308A23.1; Kindlin-1	RP23-308A23.1; Kindlin-1
Mus musculus	RefSeq	ILMN_216944	ILMN_216944	TSPAN11	NM_026743.3	NM_026743.3		68498	133893231	NM_026743.3	Tspan11	NP_081019.1	ILMN_1233890	001940390	S	3670	GGAGCATCCTGCATGGCCGATCCCAACAGCTTTCTGTTAAAGCAGACACC	6	+	127902510-127902559	6qF3	Mus musculus tetraspanin 11 (Tspan11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110014F12Rik	1110014F12Rik
Mus musculus	MEEBO	ILMN_188465	ILMN_188465	1700096P03RIK	scl34519.2.1_150						1700096P03Rik		ILMN_2452903	005690397	S	17	TGGAGTCTCTGTTACCCATTGATTCTGTAGGATACAGCATGAGGCTGCAC										
Mus musculus	RefSeq	ILMN_200108	ILMN_238615	EG666169	XM_982113.1	XM_982113.1		666169	94374970	XM_982113.1	EG666169	XP_987207.1	ILMN_1228639	006450402	S	1328	CCCTGATGTCACAGAGAGATTTGGATTCCTTTGTCTGCTGTCAGAGCCTC	5	+	95857130-95857179	5qE3	PREDICTED: Mus musculus predicted gene, EG666169 (EG666169), mRNA.					
Mus musculus	RefSeq	ILMN_197418	ILMN_248980	LOC640524	XM_917520.2	XM_917520.2		640524	94366833	XM_917520.2	LOC640524	XP_922613.2	ILMN_1227011	006180612	S	10805	CCCCCCTTGTACCTGAGGAGACTGAATGTGAGAGGCTGGAGGACAGAAGG				2qE5	PREDICTED: Mus musculus similar to Spectrin beta chain, brain 4 (Spectrin, non-erythroid beta chain 4) (Beta-V spectrin) (BSPECV) (LOC640524), mRNA.					
Mus musculus	RefSeq	ILMN_221068	ILMN_221068	SLC2A5	NM_019741.3	NM_019741.3		56485	141801986	NM_019741.3	Slc2a5	NP_062715.2	ILMN_1218769	000450020	S	2603	GCGAAGACACACTGAGCGTGGATTATTAACTGTAAGCGATACTACTTTGT	4	+	149517784-149517833	4qE2	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 5 (Slc2a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Catalysis of the transfer of fructose from one side of the membrane to the other. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 5353] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Slc5a; AI526984; MGC32452; Glut5	Slc5a; AI526984; MGC32452; Glut5
Mus musculus	MEEBO	ILMN_214223	ILMN_214223	4930506M07RIK	scl000443.1_44				22539700	BC030338	4930506M07Rik		ILMN_1226429	003460195	S	1551	ACTGAGTTAGAGAGGATTTTACGTCGCAGAAAGCTGACGGCAGAAGCAGA						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence ISA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_208704	ILMN_312512	LOC100046690	XM_001476775.1	XM_001476775.1		100046690	149258626	XM_001476775.1	LOC100046690	XP_001476825.1	ILMN_1236869	002900132	S	1933	CACGGGTGCAGACACGAATAATAAGGGCTTTACTGTGGCCGGGATGGTTG					PREDICTED: Mus musculus hypothetical protein LOC100046690 (LOC100046690), mRNA.					
Mus musculus	RefSeq	ILMN_208704	ILMN_312512	LOC100046690	XM_001476775.1	XM_001476775.1		100046690	149258626	XM_001476775.1	LOC100046690	XP_001476825.1	ILMN_1244879	006650424	S	277	CGCGCTCCCGTTGCTAGTAGGAGCTGTTTTAGGAGGAGTTTGGGGTCTCC					PREDICTED: Mus musculus hypothetical protein LOC100046690 (LOC100046690), mRNA.					
Mus musculus	RefSeq	ILMN_208704	ILMN_312512	LOC100046690	XM_001476775.1	XM_001476775.1		100046690	149258626	XM_001476775.1	LOC100046690	XP_001476825.1	ILMN_1254421	000380397	S	1272	TGTACAGTAATCAGCCTTGTGTATATGAAAACAATAAATACTATGCAAAC					PREDICTED: Mus musculus hypothetical protein LOC100046690 (LOC100046690), mRNA.					
Mus musculus	RefSeq	ILMN_210597	ILMN_210597	KCNE1	NM_008424.3	NM_008424.3		16509	144227204	NM_008424.3	Kcne1	NP_032450.1	ILMN_2757772	006180424	S	2406	GTAGGACTCGTGACTTTCTAAGAGGGACACACACGGAGAGCACCGTGAGA	16	-	92346945-92346994	16qC4	Mus musculus potassium voltage-gated channel, Isk-related subfamily, member 1 (Kcne1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2070] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	Isk; MinK; nmf190	Isk; MinK; nmf190
Mus musculus	RefSeq	ILMN_210597	ILMN_210597	KCNE1	NM_008424.3	NM_008424.3		16509	144227204	NM_008424.3	Kcne1	NP_032450.1	ILMN_2607246	000050709	S	684	CTGTGAGGGGTGAATTAATGACACCAGTTTTCTGAAATTGCATTCTTTCT	16	-	92348667-92348716	16qC4	Mus musculus potassium voltage-gated channel, Isk-related subfamily, member 1 (Kcne1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2070] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	Isk; MinK; nmf190	Isk; MinK; nmf190
Mus musculus	RefSeq	ILMN_212401	ILMN_212401	AKR7A5	NM_025337.2	NM_025337.2		110198	27659727	NM_025337.2	Akr7a5	NP_079613.2	ILMN_2908045	003780228	S	1020	GCCACTGAGGAAGGGCCCCTGGAGCCGGCTGTCGTGGAAGCCTTTGACCA	4	+	138874073-138874122	4qD3	Mus musculus aldo-keto reductase family 7, member A5 (aflatoxin aldehyde reductase) (Akr7a5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Afar1; 0610025K21Rik; Afar	Afar1; 0610025K21Rik; Afar
Mus musculus	RefSeq	ILMN_212401	ILMN_212401	AKR7A5	NM_025337.2	NM_025337.2		110198	27659727	NM_025337.2	Akr7a5	NP_079613.2	ILMN_2625991	001980221	S	655	TGGAGGCCGAGCTCCTCCCCTGCCTCAGACACTTCGGACTGAGGTTCTAC	4	+	138872653-138872702	4qD3	Mus musculus aldo-keto reductase family 7, member A5 (aflatoxin aldehyde reductase) (Akr7a5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Afar1; 0610025K21Rik; Afar	Afar1; 0610025K21Rik; Afar
Mus musculus	RefSeq	ILMN_212401	ILMN_212401	AKR7A5	NM_025337.2	NM_025337.2		110198	27659727	NM_025337.2	Akr7a5	NP_079613.2	ILMN_1256518	003180068	S	1176	TGGCCACTCCTTGCCCAGTGCTGACCTAGTGTGTGCTTTTCGGCTGGTCT	4	+	138874229-138874278	4qD3	Mus musculus aldo-keto reductase family 7, member A5 (aflatoxin aldehyde reductase) (Akr7a5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Afar1; 0610025K21Rik; Afar	Afar1; 0610025K21Rik; Afar
Mus musculus	Riken	ILMN_203546	ILMN_203546	9330154M19RIK	ri|9330154M19|PX00104P20|AK034081|4679					AK034081	9330154M19Rik		ILMN_1255128	006520209	S	4308	GTAAGCTGCTGTGGGGATGCTGGGAACCAAACTGCAAGAGCAGCAGGTGC										
Mus musculus	Riken	ILMN_202700	ILMN_202700	8430426J06RIK	ri|8430426J06|PX00025A11|AK020235|971					AK020235	8430426J06Rik		ILMN_2551612	006200274	S	695	CATCTGAGTGCCCATCAGTCGCTGTAGACAAGCACAGCATGGTAAGGCCG										
Mus musculus	Riken	ILMN_205762	ILMN_205762	P38IP-PENDING	ri|C920020G15|PX00178A02|AK050619|1867					AK050619	P38ip-pending		ILMN_1248070	004200500	S	1686	CTGGGGAGTGTAGGCAGGGTCTGTGACTCCCTAGTTTGCCTGGAACATGT										
Mus musculus	RefSeq	ILMN_218994	ILMN_218994	SV2A	NM_022030.3	NM_022030.3		64051	118130403	NM_022030.3	Sv2a	NP_071313.1	ILMN_1213495	003190681	S	3713	GGACCAGAAGCCTCAGTTTCCCCGTTTTGCCCTTCCACAGAACAGCCTTG	3	+	95998899-95998948	3qF2.1	Mus musculus synaptic vesicle glycoprotein 2 a (Sv2a), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	mKIAA0736; AI746429	mKIAA0736; AI746429
Mus musculus	RefSeq	ILMN_201372	ILMN_201372	LOC385058	XM_358022.1	XM_358022.1			38093398	XM_358022.1	LOC385058		ILMN_2542066	007610403	S	216	CCGGGACCTAGTGGTCACTCAGTGTGGCAATGCTATATACAGAGTTCTCC										
Mus musculus	MEEBO	ILMN_222953	ILMN_222953	PHXR1	scl21340.1.1_227	NM_011080.1			6755055	NM_011080.1	Phxr1		ILMN_2757180	006840377	S	351	ACATATTCATGCAAATAGAAAAAGTAGAGAAAATTAAAGTTATCAAAAAT										
Mus musculus	RefSeq	ILMN_219668	ILMN_219668	THEM5	NM_025416.2	NM_025416.2		66198	142372271	NM_025416.2	Them5	NP_079692.1	ILMN_2712007	004200767	S	229	TCTCCTGCCCAGAGTCCACCTGGCCTCAGCATTTGGTTCCTCCACAGAGT	3	+	94146249-94146298	3qF2.1	Mus musculus thioesterase superfamily member 5 (Them5), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1110038F21Rik; 1110007B02Rik	1110038F21Rik; 1110007B02Rik
Mus musculus	RefSeq	ILMN_219010	ILMN_219010	FGF7	NM_008008.3	NM_008008.3		14178	34328444	NM_008008.3	Fgf7	NP_032034.1	ILMN_2833706	006450372	S	1378	GCTGCTGGGATGCTTTGTCAGATGATCAAGCCCCACACAAACTACAGACG	2	+	125915753-125915802	2qF1	Mus musculus fibroblast growth factor 7 (Fgf7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Kgf	Kgf
Mus musculus	Riken	ILMN_207263	ILMN_207263	FLT4	ri|G630006F08|PL00012P08|AK090148|3591					AK090148	Flt4		ILMN_1219072	004480463	S	3277	CCCTTTTCAGGGCCACAGAGTCCTAGCTTAGCCTATTCAGAGGGGAGGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence ISO]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IGI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196358	ILMN_196358	1700084P21RIK	NM_183098.1	NM_183098.1			34147078	NM_183098.1	1700084P21Rik		ILMN_1236923	007330451	S	558	CACCGACCTTGGACTCTATTGACGGGAGCTTTGCTAACCTGCAACCTGTG										
Mus musculus	RefSeq	ILMN_227493	ILMN_227493	SLC17A6	NM_080853.2	NM_080853.2		140919	31543716	NM_080853.2	Slc17a6	NP_543129.2	ILMN_2922321	006840709	S	3831	TGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGAGCTGGAGGCCCTGC	7	+	58926244-58926293	7qB5	Mus musculus solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 (Slc17a6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of neurotransmitters into neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters. It does not occur during cholinergic synaptic transmission. Instead, acetylcholine is enzymatically degraded in the synaptic cleft [goid 1504] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid [goid 5313] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	DNPI; 2900073D12Rik; VGLUT2	DNPI; 2900073D12Rik; VGLUT2
Mus musculus	RefSeq	ILMN_193173	ILMN_193173	ZFP364	NM_026406.2	NM_026406.2		67845	31980966	NM_026406.2	Zfp364	NP_080682.2	ILMN_1237551	004890348	S	2099	GGCCAAAACAACTTAGTTTGGGAAGGTAGATTGTGTTTTACATTCTAGCG	3	+	96594965-96595014	3qF2.1	Mus musculus zinc finger protein 364 (Zfp364), mRNA.				2610028E05Rik; AU042696	2610028E05Rik; AU042696
Mus musculus	RefSeq	ILMN_203590	ILMN_245773	FAM178A	NM_001081225.1	NM_001081225.1		226151	124487014	NM_001081225.1	Fam178a	NP_001074694.1	ILMN_1240894	006860047	S	2081	GAAAGCCTCCTGCGGTTTCCAAGGGGCTTAGATCCCAGTCGTCAGACTAC	19	+	45016864-45016913	19qC3	Mus musculus family with sequence similarity 178, member A (Fam178a), mRNA.				AU014917; 3632432H19	AU014917; 3632432H19
Mus musculus	RefSeq	ILMN_204505	ILMN_245773	FAM178A	NM_001081225.1	NM_001081225.1		226151	124487014	NM_001081225.1	Fam178a	NP_001074694.1	ILMN_1236461	007610608	S	1335	TCCTGGTGGTGTTCTGCGCTTGGAAGACATAGCCAAGGAGCCTGAGGACG	19	+	45016118-45016167	19qC3	Mus musculus family with sequence similarity 178, member A (Fam178a), mRNA.				AU014917; 3632432H19	AU014917; 3632432H19
Mus musculus	RefSeq	ILMN_222870	ILMN_245773	FAM178A	NM_001081225.1	NM_001081225.1		226151	124487014	NM_001081225.1	Fam178a	NP_001074694.1	ILMN_2755981	000580463	S	6234	TGCAGTCAGTGTTGTGCATTGTTTTGTCTCTGTCCTGATGGCAACGGTGC	19	+	45057631-45057680	19qC3	Mus musculus family with sequence similarity 178, member A (Fam178a), mRNA.				AU014917; 3632432H19	AU014917; 3632432H19
Mus musculus	RefSeq	ILMN_205011	ILMN_245773	FAM178A	NM_001081225.1	NM_001081225.1		226151	124487014	NM_001081225.1	Fam178a	NP_001074694.1	ILMN_1216930	003850196	S	1345	GTTCTGCGCTTGGAAGACATAGCCAAGGAGCCTGAGGACGAGACAGATCG	19	+	45016128-45016177	19qC3	Mus musculus family with sequence similarity 178, member A (Fam178a), mRNA.				AU014917; 3632432H19	AU014917; 3632432H19
Mus musculus	RefSeq	ILMN_207026	ILMN_245773	FAM178A	NM_001081225.1	NM_001081225.1		226151	124487014	NM_001081225.1	Fam178a	NP_001074694.1	ILMN_2584490	006650048	S	6634	GGTGGGGGCGTGAGTCAGCACAATCCCATCTCGTGGCTATGCCTACTCTA	19	+	45058031-45058080	19qC3	Mus musculus family with sequence similarity 178, member A (Fam178a), mRNA.				AU014917; 3632432H19	AU014917; 3632432H19
Mus musculus	RefSeq	ILMN_226810	ILMN_226810	TLCD2	NM_027249.2	NM_027249.2		380712	47087150	NM_027249.2	Tlcd2	NP_081525.1	ILMN_2814385	005900592	S	834	GCACAAGGAAACCAAGACACGTGAGCCTGTTGCCAGGAACACTTCCACTC	11	+	75283342-75283391	11qB5	Mus musculus TLC domain containing 2 (Tlcd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-384C18.8	RP23-384C18.8
Mus musculus	RefSeq	ILMN_199154	ILMN_226810	TLCD2	NM_027249.2	NM_027249.2		380712	47087150	NM_027249.2	Tlcd2	NP_081525.1	ILMN_1249828	001410050	S	742	CTGGTCACCGTGGGCAGCATAAGCATCTCCACAGGGATCCGAATTCTGAC	11	+	75283250-75283299	11qB5	Mus musculus TLC domain containing 2 (Tlcd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-384C18.8	RP23-384C18.8
Mus musculus	RefSeq	ILMN_200461	ILMN_200461	LOC383231	XM_356937.1	XM_356937.1			38082216	XM_356937.1	LOC383231		ILMN_1247187	002000008	S	419	TGCAGTGCCTGAATTGGCAAGCTCTTATGGCTGGGAAGCCTGACGGCTCC										
Mus musculus	RefSeq	ILMN_196902	ILMN_196902	LOC329150	XM_283621.2	XM_283621.2			38049490	XM_283621.2	LOC329150		ILMN_1238220	003610630	S	3765	TACATAAGGACCAGAGTGGTATTCCTGGTTGGCCCCTTAGTTCTGGATCC										
Mus musculus	RefSeq	ILMN_197547	ILMN_197547	LOC381447	XM_355402.1	XM_355402.1			38076515	XM_355402.1	LOC381447		ILMN_2528512	002600725	S	22	CAGGGCCAGTCCCAGTTGGCCAGCCATATCATCCCCACATGGCTCAAGAT										
Mus musculus	RefSeq	ILMN_213244	ILMN_213244	HPCA	NM_010471.2	NM_010471.2		15444	40254583	NM_010471.2	Hpca	NP_034601.1	ILMN_2787238	001260110	S	1134	TCCCAGGATTCCAACTGGGGGTCCCCAAACTCAACCTGCCTCTTTGCACT	4	-	128789087-128789136	4qD2.2	Mus musculus hippocalcin (Hpca), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_218527	ILMN_218527	C630004L07	scl23600.1.2_278	NM_183302.1			34303968	NM_183302.1	C630004L07		ILMN_1259659	002710551	S	1156	CAATAGCCAGGGCTGTGGTAGACATGTGCTTATCAGTCATGTGGGATGCC										
Mus musculus	RefSeq	ILMN_192475	ILMN_323971	1110029I05RIK	XM_001474212.1	XM_001474212.1		319491	149260159	XM_001474212.1	1110029I05Rik	XP_001474262.1	ILMN_2488405	003390148	S	1340	CCACTAACGGTCACTCAGGGACCACCTACCCAGAACAGACGGGGAATTGA	9	+	96223793-96223842	9qE3.3	PREDICTED: Mus musculus RIKEN cDNA 1110029I05 gene (1110029I05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200273	ILMN_200273	LOC386121	XM_359078.1	XM_359078.1			38081167	XM_359078.1	LOC386121		ILMN_2538184	004290121	S	373	CAAGATATCTGCGCACCTTCCCTTGACAGACAAGTAGACCAATGGAATAG										
Mus musculus	RefSeq	ILMN_198488	ILMN_332114	LOC433261	XR_034247.1	XR_034247.1		433261	149270543	XR_034247.1	LOC433261		ILMN_1213443	004590187	S	789	GCATGATTTCCTTAAGTATCTGGCAAAGAATTCTGCCTCTGTTTACTGCC	19	+	61243907-61243956	19qD3	PREDICTED: Mus musculus similar to Sid393p (LOC433261), misc RNA.					
Mus musculus	MEEBO	ILMN_212485	ILMN_212485	D630029K05RIK	scl38406.4_123	NM_175330.2			31341618	NM_175330.2	D630029K05Rik		ILMN_2626968	006480193	S	1502	TGGCCCTCCAACAGGTTCAGCTCATATATAATAACGTTCCTATCCAGACT										
Mus musculus	Riken	ILMN_204969	ILMN_204969	2410005G18RIK	ri|A930007L12|PX00065F23|AK044329|3220					AK044329	2410005G18Rik		ILMN_2568998	003360546	S	2509	GGTCGGATGGGGAACGCTGAGGGTCAAGTGGGCAAGTTCCAGAATAGTGG										
Mus musculus	RefSeq	ILMN_218033	ILMN_244228	MDN1	NM_001081392.1	NM_001081392.1		100019	124487132	NM_001081392.1	Mdn1	NP_001074861.1	ILMN_1260383	003140326	S	17646	GGTTCCCTTGGGCCTGGGGGCAGTTTTACTTGGCCAGAAAGCAGTGTTTG	4	+	32861879-32861928	4qA5	Mus musculus midasin homolog (yeast) (Mdn1), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	A130070M06; 4833432B22Rik; AA958993; Gm135	A130070M06; 4833432B22Rik; AA958993; Gm135
Mus musculus	RefSeq	ILMN_197899	ILMN_244228	MDN1	NM_001081392.1	NM_001081392.1		100019	124487132	NM_001081392.1	Mdn1	NP_001074861.1	ILMN_1214788	001090050	S	2110	CTCGCAGTGTGTGTCAGTCAAGGGGAGCCTGTGTTGTTAGTGGGAGAGAC	4	+	32765326-32765375	4qA5	Mus musculus midasin homolog (yeast) (Mdn1), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	A130070M06; 4833432B22Rik; AA958993; Gm135	A130070M06; 4833432B22Rik; AA958993; Gm135
Mus musculus	RefSeq	ILMN_221743	ILMN_221743	PRELP	NM_054077.3	NM_054077.3		116847	142387274	NM_054077.3	Prelp	NP_473418.2	ILMN_2739760	007380524	S	3492	GACCATGTTAACTCTGATACAGCGTCCGCATTCCAGCAAGCTTCACAGCA	1	-	135806917-135806966	1qE4	Mus musculus proline arginine-rich end leucine-rich repeat (Prelp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	7330409J17Rik; SLRR2A	7330409J17Rik; SLRR2A
Mus musculus	RefSeq	ILMN_215501	ILMN_215501	NUDT14	NM_025399.3	NM_025399.3		66174	146134990	NM_025399.3	Nudt14	NP_079675.1	ILMN_2660364	005570767	S	552	GGTGGAGGGCTGGCCGAGGAGGGAGAACTCATCGAAGTGATCCATCTGAA				12qF1	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 14 (Nudt14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-sugar + H2O = UMP + sugar 1-phosphate [goid 8768] [evidence IEA]	1110030M18Rik	1110030M18Rik
Mus musculus	RefSeq	ILMN_210446	ILMN_210446	LAMP2	NM_010685.3	NM_010685.3		16784	63054835	NM_010685.3	Lamp2	NP_034815.2	ILMN_1217454	006560327	S	3508	GTGCTAGCTGATGTACGTACGATATCTCTTCTCAGATATTTGCCTGTCTG	X	-	35772731-35772780	XqA3.3	Mus musculus lysosomal-associated membrane protein 2 (Lamp2), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding the platelet dense granule [goid 31088] [evidence ISO]			Lamp-2c; CD107b; Lamp-2b; Lamp-2a; Lamp-2	Lamp-2c; CD107b; Lamp-2b; Lamp-2a; Lamp-2
Mus musculus	RefSeq	ILMN_214524	ILMN_214524	8430406I07RIK	NM_028984.4	NM_028984.4		74528	146141102	NM_028984.4	8430406I07Rik	NP_083260.1	ILMN_2648909	001440722	S	1914	TAGTAGCATTAAAATTATAAGTTACACAATCACATTTAGTTTTCATTAGT				2qG1	Mus musculus RIKEN cDNA 8430406I07 gene (8430406I07Rik), mRNA.				AI426476	AI426476
Mus musculus	RefSeq	ILMN_216563	ILMN_216563	GPR89	NM_026229.1	NM_026229.1		67549	21312913	NM_026229.1	Gpr89	NP_080505.1	ILMN_2953098	003930746	S	1447	CAGACTCCCTGCCAACTTCAGGAAAGGAGACACAGTGGGGAGACCAGAGC	3	-	96956739-96956788	3qF2.1	Mus musculus G protein-coupled receptor 89 (Gpr89), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			SH120; 4933412D19Rik	SH120; 4933412D19Rik
Mus musculus	RefSeq	ILMN_196454	ILMN_320546	AI464131	NM_001085515.1	NM_001085515.1		329828	147903586	NM_001085515.1	AI464131	NP_001078984.1	ILMN_2670472	001030653	S	3780	GGTGGAGAATGAAGTAGAACTCAGCTTCCCTCTCAGAGCCTGTGCCCGAA				4qA5	Mus musculus expressed sequence AI464131 (AI464131), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]	AI604836; Gm762; AA408153; RP23-100C7.2	AI604836; Gm762; AA408153; RP23-100C7.2
Mus musculus	RefSeq	ILMN_210336	ILMN_210336	RGS14	NM_016758.2	NM_016758.2		51791	31980625	NM_016758.2	Rgs14	NP_058038.2	ILMN_2604548	005870364	S	2156	GCCCCTCCTTAAAGAGTTGATATAAGTAAGACCTGGGTGTACTGGTGAGC	13	+	55485887-55485936	13qB1	Mus musculus regulator of G-protein signaling 14 (Rgs14), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IMP]	 [goid 5057] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]		
Mus musculus	RefSeq	ILMN_224819	ILMN_224819	4921536K21RIK	NM_026150.1	NM_026150.1		67430	13385653	NM_026150.1	4921536K21Rik	NP_080426.1	ILMN_2876359	006620682	S	2033	GGCTTGGGAGCACCATGTGGGTGTCAGGAATCAAACTCAGCTCCTCTGCA	11	-	3786598-3786647	11qA1	Mus musculus RIKEN cDNA 4921536K21 gene (4921536K21Rik), mRNA.				AV043724; RP23-128G5.3	AV043724; RP23-128G5.3
Mus musculus	MEEBO	ILMN_189326	ILMN_189326	8430427H17RIK	scl18480.9.1_330				50233835	NM_001001986	8430427H17Rik		ILMN_2460292	001090408	S	10	TTAAATACTAGATCTTCATCCATTTAGAGCTTACCCTAATAAATTGTAAT										
Mus musculus	MEEBO	ILMN_189326	ILMN_189326	8430427H17RIK	scl18480.9.1_330				50233835	NM_001001986	8430427H17Rik		ILMN_2615026	005490504	S	4484	TCCCTCCCTATTTCTCAAGGGCCACAAATGACTCCACAGGTGGTTATAGG										
Mus musculus	RefSeq	ILMN_225317	ILMN_225317	RBM15	NM_001045807.1	NM_001045807.1		229700	124249065	NM_001045807.1	Rbm15	NP_001039272.1	ILMN_2945275	004780411	S	2981	CCCACCTTGTGAGTTCTCTCAGCAGTTCCTGGATTCCCCTGCCAAGGCAC	3	-	107133177-107133226	3qF2.3	Mus musculus RNA binding motif protein 15 (Rbm15), mRNA.				KIAA1438; C230088J01Rik; mKIAA1438	KIAA1438; C230088J01Rik; mKIAA1438
Mus musculus	Riken	ILMN_201669	ILMN_201669	4933439C20RIK	ri|1810010H13|R000022C24|AK007420|1588					AK007420	4933439C20Rik		ILMN_2543630	007510390	S	1512	CCTCACACTAGGGACACCCTGGGGAGATGGACATTCCAGTACAAAGAAGG										
Mus musculus	MEEBO	ILMN_223731	ILMN_223731	EBI2	scl45133.3_447	NM_183031.1			33942115	NM_183031.1	Ebi2		ILMN_1220101	002600377	S	1235	GCCCCACCGGCCAATGCACTGAGATCCAGACCAGATCGAGGAGACAAAAA										
Mus musculus	RefSeq	ILMN_191718	ILMN_244810	FAT1	NM_001081286.1	NM_001081286.1		14107	124486854	NM_001081286.1	Fat1	NP_001074755.1	ILMN_1250688	001260379	S	14355	CATTGACACATTTCGGTCCAGTGTAGCTGTACATATGGGGTGTGGACGAC	8	+	46137321-46137370	8qB1.1	Mus musculus FAT tumor suppressor homolog 1 (Drosophila) (Fat1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310038E12Rik; mFat1; AU023433; Fath	2310038E12Rik; mFat1; AU023433; Fath
Mus musculus	RefSeq	ILMN_244810	ILMN_244810	FAT1	NM_001081286.1	NM_001081286.1		14107	124486854	NM_001081286.1	Fat1	NP_001074755.1	ILMN_2893199	001190689	S	12165	CAACGGCGGCTTTGTGTGCCAGTGCAGGGGGCTGTACACTGGGCTTGTTT	8	+	46127340-46127380:46127517-46127525	8qB1.1	Mus musculus FAT tumor suppressor homolog 1 (Drosophila) (Fat1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310038E12Rik; mFat1; AU023433; Fath	2310038E12Rik; mFat1; AU023433; Fath
Mus musculus	RefSeq	ILMN_191718	ILMN_244810	FAT1	NM_001081286.1	NM_001081286.1		14107	124486854	NM_001081286.1	Fat1	NP_001074755.1	ILMN_1259809	000110044	S	13508	TCTACCCCGCCGATATGTCCGAACCTCAGAAACAAGGCGCTGGCGAGAAC	8	+	46136474-46136523	8qB1.1	Mus musculus FAT tumor suppressor homolog 1 (Drosophila) (Fat1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310038E12Rik; mFat1; AU023433; Fath	2310038E12Rik; mFat1; AU023433; Fath
Mus musculus	MEEBO	ILMN_189584	ILMN_189584	LMTN	scl0319146.4_174				37497121	NM_197889	Lmtn		ILMN_2462559	002600458	S	20	ATCCTGAGAAAGATGTCTTATGTGACTCCTGTTTAGGGGGTTGGGGGTGG										
Mus musculus	MEEBO	ILMN_189584	ILMN_189584	LMTN	scl0319146.4_174				37497121	NM_197889	Lmtn		ILMN_1230408	005390634	S	17	GGAATCCTGAGAAAGATGTCTTATGTGACTCCTGTTTAGGGGGTTGGGGG										
Mus musculus	RefSeq	ILMN_216618	ILMN_216618	OGFR	NM_031373.2	NM_031373.2		72075	31982603	NM_031373.2	Ogfr	NP_113550.2	ILMN_1250450	005690717	S	2149	AAGGGTCTAAGGGGATGGGCCTCTTTTCTTCGTCTGGTGCCAAGTGAGGC	2	+	180330457-180330506	2qH4	Mus musculus opioid growth factor receptor (Ogfr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2010013E17Rik	2010013E17Rik
Mus musculus	RefSeq	ILMN_211650	ILMN_211650	KCNAB1	NM_010597.3	NM_010597.3		16497	148747466	NM_010597.3	Kcnab1	NP_034727.3	ILMN_1216469	002570608	S	2441	CAGAATCTGAGATACACTTAGCTCTGCCTCTACGGGCTAATTCCCCTCAC				3qE1	Mus musculus potassium voltage-gated channel, shaker-related subfamily, beta member 1 (Kcnab1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Kvbeta1.1; Akr8a8; mKv(beta)1	Kvbeta1.1; Akr8a8; mKv(beta)1
Mus musculus	RefSeq	ILMN_211650	ILMN_211650	KCNAB1	NM_010597.3	NM_010597.3		16497	148747466	NM_010597.3	Kcnab1	NP_034727.3	ILMN_2618169	000650273	S	277	CTGGGGACCTTCACCCCTCAGCATCACATTTCTCTCAAAGAGTCCACCGC				3qE1	Mus musculus potassium voltage-gated channel, shaker-related subfamily, beta member 1 (Kcnab1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Kvbeta1.1; Akr8a8; mKv(beta)1	Kvbeta1.1; Akr8a8; mKv(beta)1
Mus musculus	Riken	ILMN_202821	ILMN_202821	CPN1	ri|9130203L14|PX00061C14|AK033629|2210					AK033629	Cpn1		ILMN_2552569	003290131	S	1627	GGCTGCTGGTCTTGGTTCTTCCTCATTTAAGCAAGGGTGGGGAGGGTCTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187626	ILMN_187626	XIST	NR_001463.2	NR_001463.2		213742	37704378	NR_001463.2	Xist		ILMN_3022688	003130192	I	17362	GGAACAGAGAAGATGGAGCCAGGTTGAAGAGGTCTGGGAGTTCAAACAAA	X	-	100656218-100656267	XqD	Mus musculus inactive X specific transcripts (Xist) on chromosome X.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IDA]	Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IDA]; Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IGI]		AI314753; A430022B11	AI314753; A430022B11
Mus musculus	RefSeq	ILMN_187626	ILMN_187626	XIST	NR_001463.2	NR_001463.2		213742	37704378	NR_001463.2	Xist		ILMN_1224091	004060521	S	1	CAGATCTGTGTGGAGCTTTGTGAAGTCTACAGTTCTATAAAGCCGGGACC	X	-	100678522-100678571	XqD	Mus musculus inactive X specific transcripts (Xist) on chromosome X.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IDA]	Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IDA]; Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IGI]		AI314753; A430022B11	AI314753; A430022B11
Mus musculus	RefSeq	ILMN_187626	ILMN_187626	XIST	NR_001463.2	NR_001463.2		213742	37704378	NR_001463.2	Xist		ILMN_2475156	005900392	S	14530	GGAGCTTTGTGAAGTCTACAGTTCTATAAAGCCGGGACCTAACTGTTGGC	X	-	100659050-100659099	XqD	Mus musculus inactive X specific transcripts (Xist) on chromosome X.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IDA]	Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IDA]; Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IGI]		AI314753; A430022B11	AI314753; A430022B11
Mus musculus	RefSeq	ILMN_229059	ILMN_229059	OLFR314	NM_001011760.1	NM_001011760.1		257917	58801307	NM_001011760.1	Olfr314	NP_001011760.1	ILMN_3161017	006280372	S	773	TGAGGCCCACATCCTCCAGGTCAGCGAACCACGATAAGGTAGTGTCAGCA	11	+	58591798-58591847	11qB1.3	Mus musculus olfactory receptor 314 (Olfr314), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR278-2	MOR278-2
Mus musculus	Riken	ILMN_202504	ILMN_202504	2700077B20RIK	ri|2700077B20|ZX00064E09|AK012522|1136					AK012522	2700077B20Rik		ILMN_1215826	001300482	S	473	ACCGGTTTTCTTAGGGATGGGCATCCAGCTTTACTGCGAACGTCCAGGAC										
Mus musculus	Riken	ILMN_202230	ILMN_202230	4930405A10RIK	ri|4930405A10|PX00029L09|AK015091|938					AK015091	4930405A10Rik		ILMN_2547989	004120497	S	203	CACAGGCTGAACTTACCAGGTGAGGTATCTGAAGTCCTCAACACTCCAAG										
Mus musculus	RefSeq	ILMN_238456	ILMN_238456	SLC7A6OS	NM_001007567.1	NM_001007567.1		66432	57222271	NM_001007567.1	Slc7a6os	NP_001007568.1	ILMN_3162446	005720392	S	1114	CCAGCATTGGAGAGTTTGGGGGCCAAGAAGAGCACTGAGAATACAAGGCC	8	-	108724696-108724745	8qD3	Mus musculus solute carrier family 7, member 6 opposite strand (Slc7a6os), mRNA.				MGC60796; 2010007L18Rik; 2400002F02Rik	MGC60796; 2010007L18Rik; 2400002F02Rik
Mus musculus	Riken	ILMN_207136	ILMN_207136	THBS1	ri|F730004F21|PL00002N04|AK089315|3530					AK089315	Thbs1		ILMN_1222059	000610431	S	3260	GGGAGGCCGCTTCAGCTCACTGACCAGCTCTCTGTTCTCTTCCGTCACTT						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212205	ILMN_212205	EIF2AK4	NM_013719.1	NM_013719.1		27103	7305016	NM_013719.1	Eif2ak4	NP_038747.1	ILMN_2623938	000730156	S	5107	CATTCATTTTAACTTTAAATTCTAATAAGCTGTCCTACAAAGCTGAGCTT	2	+	118300864-118300913	2qE5	Mus musculus eukaryotic translation initiation factor 2 alpha kinase 4 (Eif2ak4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IGI]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment [goid 9267] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of translation initiation, as a result of a stimulus indicating the organism is under stress [goid 43558] [evidence IDA]	Catalysis of the phosphorylation of the alpha subunit of eukaryotic translation initiation factor 2 (EIF2) [goid 4694] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	2610011M03; GCN2; MGCN2	2610011M03; GCN2; MGCN2
Mus musculus	RefSeq	ILMN_214639	ILMN_214639	CRYBA1	NM_009965.1	NM_009965.1		12957	20304088	NM_009965.1	Cryba1	NP_034095.1	ILMN_2842725	003440682	S	597	GCCAGAGTGGGGATCTCACGCCCAGACTTCCCAGATCCAATCAATTCGCC	11	-	77534963-77535012	11qB5	Mus musculus crystallin, beta A1 (Cryba1), mRNA.			The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	MGC130310; BA3/A1; Cryb	MGC130310; BA3/A1; Cryb
Mus musculus	RefSeq	ILMN_209005	ILMN_209005	GTF2E1	NM_028812.3	NM_028812.3		74197	146141085	NM_028812.3	Gtf2e1	NP_083088.1	ILMN_2591632	006220168	S	2765	GGCTCCTCATCGGTCATTGTCTTAAGAGCACAGGTGCAATTTGATGCGAC				16qB3	Mus musculus general transcription factor II E, polypeptide 1 (alpha subunit) (Gtf2e1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH [goid 5673] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	TFIIE-A; FE; 56kDa; 2610024P03Rik; AI303800	TFIIE-A; FE; 56kDa; 2610024P03Rik; AI303800
Mus musculus	RefSeq	ILMN_197224	ILMN_197224	LOC227677	XM_140860.1	XM_140860.1			20823587	XM_140860.1	LOC227677		ILMN_1235667	003390367	S	219	GAGGAAGCTGGGGGTTTTTTGGCTTCAAGGCTTGGGGAAGACTCAGATCC										
Mus musculus	MEEBO	ILMN_216171	ILMN_216171	OLFR1302	scl20490.1.1_22	XM_141483.1			20911212	XM_141483.1	Olfr1302		ILMN_1237211	003940678	S	589	ATTTGGATATTTTAATGTATGCTGACTGTGGAGTTGTAGGAGTAACCTGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216316	ILMN_311555	LOC100048530	XM_001480627.1	XM_001480627.1		100048530	149241449	XM_001480627.1	LOC100048530	XP_001480677.1	ILMN_2669699	004760376	S	373	GCCATGTAATAGCTAGAATGAAATGTTATCCTGAAGCCTGTTGTACATTG					PREDICTED: Mus musculus similar to coiled-coil domain containing 72 (LOC100048530), mRNA.					
Mus musculus	Riken	ILMN_203002	ILMN_203002	5330438F16RIK	ri|5330438F16|PX00054D24|AK030610|2632					AK030610	5330438F16Rik		ILMN_1228389	007570497	S	2581	TAAGGTCCCCCAGCCAGAGCAGAGATTGGTCCAGGGTTTTGGAGCCCCTT										
Mus musculus	RefSeq	ILMN_218112	ILMN_218112	MYL3	NM_010859.1	NM_010859.1		17897	33563263	NM_010859.1	Myl3	NP_034989.1	ILMN_2691780	000060202	S	823	TGGGATGGGCTTACCTACCTGTGCTTGCCTTTCTGTATCCACCCTGTGGC	9	+	110614535-110614584	9qF3	Mus musculus myosin, light polypeptide 3 (Myl3), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Mylc; MLC1s; MLC1v; VLC1	Mylc; MLC1s; MLC1v; VLC1
Mus musculus	RefSeq	ILMN_213886	ILMN_259915	UCHL5IP	NM_207104.1	NM_207104.1		73738	47458822	NM_207104.1	Uchl5ip	NP_996987.1	ILMN_2641828	004570079	S	790	CAGAAGTACAAGATCCTTACTGACAGATTTCACAGAGGCACAAGATGATG	X	-	70698380-70698399:70698400-70698429	XqA7.3	Mus musculus UCHL5 interacting protein (Uchl5ip), transcript variant 2, mRNA.				1110020L19Rik; Uip1	1110020L19Rik; Uip1
Mus musculus	MEEBO	ILMN_213245	ILMN_213245	9830004M20RIK	scl0106393.1_61	NM_175347.3			34328416	NM_175347.3	9830004M20Rik		ILMN_2724048	007200253	S	1142	TGGAGAAGACAGTGGTGATGGAGCTAGCTCAGAAGAAGAGGGGAGTACCC										
Mus musculus	RefSeq	ILMN_215825	ILMN_215825	AKR1B7	NM_009731.1	NM_009731.1		11997	6753147	NM_009731.1	Akr1b7	NP_033861.1	ILMN_1238042	007510554	S	956	CCACGAGGAATACTGAGGTCCACTTGCTTGATGAGATCCGTGCATGATAG	6	+	34372873-34372888:34372889-34372922	6qB1	Mus musculus aldo-keto reductase family 1, member B7 (Akr1b7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+ [goid 4032] [evidence IEA]	MGC107658; Avdp; MVDP	MGC107658; Avdp; MVDP
Mus musculus	RefSeq	ILMN_222756	ILMN_222756	GUCA1B	NM_146079.1	NM_146079.1		107477	22122570	NM_146079.1	Guca1b	NP_666191.1	ILMN_2754287	004640255	S	1206	CTTAGGTGGGGATGTTTCAGGTCTGCTCGGTGTTGCTCCCCAGGTCCTTC	17	+	47529454-47529503	17qC	Mus musculus guanylate cyclase activator 1B (Guca1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; Any process that modulates the frequency, rate or extent of guanylate cyclase activity [goid 31282] [evidence IGI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Modulates the activity of guanylate cyclase [goid 30249] [evidence IGI];  [goid 8048] [evidence IDA]	BC018258; GCAP2; MGC36472	BC018258; GCAP2; MGC36472
Mus musculus	RefSeq	ILMN_238146	ILMN_238146	ACOT6	NM_172580.1	NM_172580.1		217700	110626166	NM_172580.1	Acot6	NP_766168.1	ILMN_2790223	004850370	S	1461	CAATGGAGGTAAGCCACGTGCTCAATCAAGGGCACAGCTGGATGCCTGGC	12	+	85450372-85450421	12qD1	Mus musculus acyl-CoA thioesterase 6 (Acot6), mRNA. XM_992672 XM_992697	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]	A330054B07; BE688602; 4632408A20Rik	A330054B07; BE688602; 4632408A20Rik
Mus musculus	RefSeq	ILMN_257933	ILMN_257933	PTMS	NM_026988.1	NM_026988.1		69202	62460365	NM_026988.1	Ptms	NP_081264.1	ILMN_2918838	000290053	S	587	AAGCAGACCCCAAGAGGCAGAAGACAGAAAACGGGGCGTCGGCATGAACC	6	-	124864196-124864199:124864200-124864245	6qF2	Mus musculus parathymosin (Ptms), mRNA.		Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		2610009E16Rik	2610009E16Rik
Mus musculus	RefSeq	ILMN_211749	ILMN_211749	PTHLH	NM_008970.2	NM_008970.2		19227	148747355	NM_008970.2	Pthlh	NP_032996.2	ILMN_2619136	007160102	S	167	AGTCCATCCAAGACTTGCGCCGCCGTTTCTTCCTCCACCATCTGATCGCG				6qG3	Mus musculus parathyroid hormone-like peptide (Pthlh), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence ISO]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; Any process involved in the maintenance of an equilibrium of the surface-active lipoprotein mixture which coats the alveoli [goid 43129] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IEA]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30819] [evidence ISO]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte differentiation [goid 32331] [evidence ISO]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte differentiation [goid 32331] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence TAS]	PTH-like; Pthrp	PTH-like; Pthrp
Mus musculus	RefSeq	ILMN_200509	ILMN_323818	LOC668863	XR_034378.1	XR_034378.1		668863	149269435	XR_034378.1	LOC668863		ILMN_1217139	007550035	S	15	CTCCAAGGGACTCCATGCTTGTAGTGGCTATCAGTTGAAATCCATGCCGC				17qE4	PREDICTED: Mus musculus similar to ribosomal protein (LOC668863), misc RNA.					
Mus musculus	RefSeq	ILMN_221476	ILMN_221476	MAP3K11	NM_022012.3	NM_022012.3		26403	66392589	NM_022012.3	Map3k11	NP_071295.2	ILMN_2736153	004810424	S	3614	GGTGTCACCAGCACTTTTGACCAAGTCCTGTTACTGTGGCCCCTGTCTCC	19	+	5695740-5695789	19qA	Mus musculus mitogen-activated protein kinase kinase kinase 11 (Map3k11), mRNA.		Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mlk3; SPRK; PTK1; 2610017K16Rik	Mlk3; SPRK; PTK1; 2610017K16Rik
Mus musculus	RefSeq	ILMN_210125	ILMN_244638	SMGC	XM_001003990.1	XM_001003990.1		223809	94399772	XM_001003990.1	Smgc	XP_001003990.1	ILMN_2775962	002900142	S	483	GGAAAATTGGAACCAAAGTATGAGAACCCGACTAATGGCAGTAGCTCAGG				15qE3	PREDICTED: Mus musculus submandibular gland protein C, transcript variant 1 (Smgc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_199196	ILMN_199196	LOC380719	XM_358408.1	XM_358408.1			38091763	XM_358408.1	LOC380719		ILMN_1235250	004290139	S	315	CGAAAAGTTGCACTCGGATGCTCACTCATCCTTACCACAGCCTGGCGGCC										
Mus musculus	MEEBO	ILMN_216951	ILMN_216951	A630043P06	scl44287.1.1_125				51767532	XM_488662	A630043P06		ILMN_2677367	007150037	S	2088	ATCTAGCTGCTCTGTGTTGGAAACTGCCCCTTTCAATTCACTTCGCTCCA										
Mus musculus	RefSeq	ILMN_197006	ILMN_261276	GM70	XM_923932.2	XM_923932.2		210762	94392795	XM_923932.2	Gm70	XP_929025.2	ILMN_2526571	002900070	S	477	ACCACGTTTTTGAGGAATAAGAATCTTGACAGCTTCCTCATGGCGCTGTT				12qC3	PREDICTED: Mus musculus gene model 70, (NCBI), transcript variant 4 (Gm70), mRNA.					
Mus musculus	RefSeq	ILMN_196962	ILMN_261276	GM70	XM_923932.2	XM_923932.2		210762	94392795	XM_923932.2	Gm70	XP_929025.2	ILMN_2526407	001190010	S	1184	CCTCCCCCTGGAATTAGAAGAAAACACAAAACCAAGTGGAAGAAGTTCTT				12qC3	PREDICTED: Mus musculus gene model 70, (NCBI), transcript variant 4 (Gm70), mRNA.					
Mus musculus	RefSeq	ILMN_196960	ILMN_261276	GM70	XM_923932.2	XM_923932.2		210762	94392795	XM_923932.2	Gm70	XP_929025.2	ILMN_1221094	003360195	S	151	GGCAATCCTCTACCCGGCTGGACCAATGTGGATTACGACTAGGAATGTGG				12qC3	PREDICTED: Mus musculus gene model 70, (NCBI), transcript variant 4 (Gm70), mRNA.					
Mus musculus	RefSeq	ILMN_210199	ILMN_229682	MECP2	NM_001081979.1	NM_001081979.1		17257	126517468	NM_001081979.1	Mecp2	NP_001075448.1	ILMN_2603187	002940168	S	9826	GGCTGGAGGGGTCTTGAAAAGCCCTCTGTCGTATTCACCTTCAGTTTTTG	X	-	71273992-71274041	XqA7.3	Mus musculus methyl CpG binding protein 2 (Mecp2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The set of specific processes that generate the ability of an organism to cause disease in another [goid 9405] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; The chemical reactions and pathways involving any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters [goid 6576] [evidence IMP]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IMP]; The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The series of events by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception is mediated by proprioceptors, sensory nerve terminals found in muscles, tendons, and joint capsules, which give information concerning movements and position of the body. The receptors in the labyrinth are sometimes also considered proprioceptors [goid 19230] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IMP]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IMP]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The chemical reactions and pathways involving glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 8211] [evidence IMP]; The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IMP]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression; the process is mitotically or meiotically heritable, or is stably self-propagated in the cytoplasm of a resting cell, and does not entail a change in DNA sequence [goid 40029] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The series of events by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception is mediated by proprioceptors, sensory nerve terminals found in muscles, tendons, and joint capsules, which give information concerning movements and position of the body. The receptors in the labyrinth are sometimes also considered proprioceptors [goid 19230] [evidence IMP]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; A process that modulates synaptic plasticity such that synapses are changed resulting in the increase in the rate, or frequency of synaptic transmission at the synapse [goid 60291] [evidence IMP]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51965] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the covalent addition of methyl groups to histones [goid 31061] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the brain ventricular system over time, from its formation to the mature structure. The brain ventricular system consists of four communicating cavities within the brain that are continuous with the central canal of the spinal cord. These cavities include two lateral ventricles, the third ventricle and the fourth ventricle. Cerebrospinal fluid fills the ventricles and is produced by the choroid plexus [goid 21591] [evidence IMP]; The regulation of blood pressure mediated by detection of stimuli and a neurological response [goid 1976] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; The chemical reactions and pathways involving cardiolipin, 1,3-bis(3-phosphatidyl)glycerol [goid 32048] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35067] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IMP]; The chemical reactions and pathways involving phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline. They are important constituents of cell membranes [goid 46470] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The regulated release of catecholamines by a cell or group of cells. The catecholamines are a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 50432] [evidence IMP]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IMP]; The modification of histones by addition of methyl groups [goid 16571] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme [goid 35197] [evidence IDA]; Interacting selectively with double-stranded methylated DNA. Cytosine methylation in DNA is an important mechanism for establishing stable heritable epigenetic marks [goid 10385] [evidence IDA]; Interacting selectively with double-stranded methylated DNA. Cytosine methylation in DNA is an important mechanism for establishing stable heritable epigenetic marks [goid 10385] [evidence ISS]; Interacting selectively with double-stranded methylated DNA. Cytosine methylation in DNA is an important mechanism for establishing stable heritable epigenetic marks [goid 10385] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with a methylated cytosine/guanine dinucleotide [goid 8327] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with a methylated cytosine/guanine dinucleotide [goid 8327] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	BB130002; 1500041B07Rik; Mbd5; WBP10; D630021H01Rik	BB130002; 1500041B07Rik; Mbd5; WBP10; D630021H01Rik
Mus musculus	MEEBO	ILMN_188803	ILMN_188803	2810429I04RIK	scl0076937.1_12				51767504	XM_488660	2810429I04Rik		ILMN_2455858	003520392	S	20	CTTAGATATGGGTTTGAATTATGTCTCTGCTGGTTGTATGACTTTGAGCT										
Mus musculus	RefSeq	ILMN_206905	ILMN_228240	ARHGAP12	NM_001039692.1	NM_001039692.1		75415	89242142	NM_001039692.1	Arhgap12	NP_001034781.1	ILMN_1255954	005340156	S	1681	GGACTCCAACGACAAGGATTCTCCAACTACCACAAAACTCTGCTTACCTG	18	-	6057555-6057589:6061845-6061859	18qA1	Mus musculus Rho GTPase activating protein 12 (Arhgap12), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810011M08Rik	2810011M08Rik
Mus musculus	RefSeq	ILMN_197744	ILMN_252283	EG635702	XM_910834.3	XM_910834.3		635702	149250912	XM_910834.3	EG635702	XP_915927.3	ILMN_1236294	006060608	S	180	CTGCCCTTGATTTAGAGTGGGATATGGAGAAGGAACTGGAAGAGCCGGGC				3qA3	PREDICTED: Mus musculus predicted gene, EG635702 (EG635702), mRNA.					
Mus musculus	RefSeq	ILMN_199835	ILMN_252283	EG635702	XM_910834.3	XM_910834.3		635702	149250912	XM_910834.3	EG635702	XP_915927.3	ILMN_1249332	004220600	S	1726	GAGAGCTCAGTGCCTGGGAGCCAATGTCAGCTCTGTGCAGATACAAGGTG				3qA3	PREDICTED: Mus musculus predicted gene, EG635702 (EG635702), mRNA.					
Mus musculus	RefSeq	ILMN_229033	ILMN_229033	CHDH	NM_172264.1	NM_172264.1		218865	26986562	NM_172264.1	Chdh	NP_758468.1	ILMN_3109728	002350414	A	3062	GGCTGAGTGAAGAAGAGAGAGGAAATAGCAGGATTCCAGGGTCCCCTAGG	14	+	30851264-30851313	14qB	Mus musculus choline dehydrogenase (Chdh), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells [goid 6066] [evidence IEA]; The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline [goid 19285] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: choline + acceptor = betaine aldehyde + reduced acceptor [goid 8812] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16614] [evidence IEA]	MGC30702; D630034H06Rik; AU041472	MGC30702; D630034H06Rik; AU041472
Mus musculus	RefSeq	ILMN_210564	ILMN_229033	CHDH	NM_172264.1	NM_172264.1		218865	26986562	NM_172264.1	Chdh	NP_758468.1	ILMN_1218504	006020044	S	2931	CCAAGCTGCCTCATTCCAACTGTTCTTATGAGAGAATGGGGGTCAGACGC	14	+	30851133-30851182	14qB	Mus musculus choline dehydrogenase (Chdh), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells [goid 6066] [evidence IEA]; The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline [goid 19285] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: choline + acceptor = betaine aldehyde + reduced acceptor [goid 8812] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16614] [evidence IEA]	MGC30702; D630034H06Rik; AU041472	MGC30702; D630034H06Rik; AU041472
Mus musculus	RefSeq	ILMN_195039	ILMN_242576	REN1	NM_031192.2	NM_031192.2		19701	89886403	NM_031192.2	Ren1	NP_112469.1	ILMN_2777226	001050204	S	1007	CACCCTCCCCGACATTTCCTTTGACCTGGGAGGCAGGGCCTACACACTCA	1	+	135255937-135255986	1qE4	Mus musculus renin 1 structural (Ren1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The establishment of the barrier between the perineurium of peripheral nerves and the vascular endothelium of endoneurial capillaries. The perineurium acts as a diffusion barrier, but ion permeability at the blood-nerve barrier is still higher than at the blood-brain barrier [goid 8065] [evidence IMP]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IDA]; The specific actions or reactions of an organism relating to the intake of liquids, especially water [goid 42756] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process by which the renin-angiotensin system controls the rate of fluid intake and output into the blood [goid 2016] [evidence IMP]; The process leading to the attainment of the full functional capacity of angiotensin by conversion of renin substrate into mature angiotensin in the blood [goid 2003] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	Ren1d; renin b; Ren-1; Rnr; D19352; Rn-1; Ren1c; Ren-A; Ren	Ren1d; renin b; Ren-1; Rnr; D19352; Rn-1; Ren1c; Ren-A; Ren
Mus musculus	RefSeq	ILMN_211850	ILMN_242576	REN1	NM_031192.2	NM_031192.2		19701	89886403	NM_031192.2	Ren1	NP_112469.1	ILMN_2620114	006980563	S	1193	AGAGTTTGATCGGCATAACAATCGCATTGGATTCGCCTTGGCCCGCTAAG	1	+	135256667-135256715:135256716-135256716	1qE4	Mus musculus renin 1 structural (Ren1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The establishment of the barrier between the perineurium of peripheral nerves and the vascular endothelium of endoneurial capillaries. The perineurium acts as a diffusion barrier, but ion permeability at the blood-nerve barrier is still higher than at the blood-brain barrier [goid 8065] [evidence IMP]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IDA]; The specific actions or reactions of an organism relating to the intake of liquids, especially water [goid 42756] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process by which the renin-angiotensin system controls the rate of fluid intake and output into the blood [goid 2016] [evidence IMP]; The process leading to the attainment of the full functional capacity of angiotensin by conversion of renin substrate into mature angiotensin in the blood [goid 2003] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	Ren1d; renin b; Ren-1; Rnr; D19352; Rn-1; Ren1c; Ren-A; Ren	Ren1d; renin b; Ren-1; Rnr; D19352; Rn-1; Ren1c; Ren-A; Ren
Mus musculus	RefSeq	ILMN_187979	ILMN_256864	CSNRP3	NM_153409.3	NM_153409.3		77771	141802326	NM_153409.3	Csnrp3	NP_700458.2	ILMN_2744731	003130537	S	2135	CTGGGCTCATCGTTGTTTAAACCTGAAGGCCAAGAGTTATGTGGACTGTG	2	+	65861141-65861190	2qC1.3	Mus musculus cysteine-serine-rich nuclear protein 3 (Csnrp3), mRNA.				RP23-306G16.1; Mbu1; taip-2	RP23-306G16.1; Mbu1; taip-2
Mus musculus	RefSeq	ILMN_213772	ILMN_213772	ATXN7L1	NM_028139.3	NM_028139.3		380753	146141225	NM_028139.3	Atxn7l1	NP_082415.1	ILMN_1246174	002510242	S	1331	CAGCAAGACAAATAGAAAAATTATACAGCCCAGTTTCTAGAAGAGTACTG				12qA3	Mus musculus ataxin 7-like 1 (Atxn7l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810423G08Rik	2810423G08Rik
Mus musculus	MEEBO	ILMN_215558	ILMN_215558	1500011J06RIK	scl00208606.1_186				53988373	NM_001005523	1500011J06Rik		ILMN_2660995	002260259	S	2505	ATCTTATGTGCTTAATAAAGGAAAAAAGGATAATAGGTTATGACATATCT										
Mus musculus	RefSeq	ILMN_230397	ILMN_230397	SLITRK5	NM_198865.1	NM_198865.1		75409	56699417	NM_198865.1	Slitrk5	NP_942565.1	ILMN_3153010	007610246	A	4226	CACAGAGGCGTCGTTGCACTGGATTCGCTGCGTTCCCAAAACTAGAGTGA	14	+	112081776-112081825	14qE4	Mus musculus SLIT and NTRK-like family, member 5 (Slitrk5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2610019D03Rik	2610019D03Rik
Mus musculus	RefSeq	ILMN_230397	ILMN_230397	SLITRK5	NM_198865.1	NM_198865.1		75409	56699417	NM_198865.1	Slitrk5	NP_942565.1	ILMN_3074109	006370397	I	2915	CCGGTCTCGAGAAGGCAATTCCGTGGAGGATTACAAAGACCTGCACGAGC	14	+	112080465-112080514	14qE4	Mus musculus SLIT and NTRK-like family, member 5 (Slitrk5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2610019D03Rik	2610019D03Rik
Mus musculus	RefSeq	ILMN_214888	ILMN_214888	TBC1D7	NM_025935.2	NM_025935.2		67046	141803204	NM_025935.2	Tbc1d7	NP_080211.1	ILMN_2653100	000840603	S	196	CATTTAGCCAGAGGTTCCCTCTCCCATCCATGTATCGCGCGTTGGTATGG	13	-	43264155-43264204	13qA4	Mus musculus TBC1 domain family, member 7 (Tbc1d7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	2610009C09Rik	2610009C09Rik
Mus musculus	RefSeq	ILMN_214888	ILMN_214888	TBC1D7	NM_025935.2	NM_025935.2		67046	141803204	NM_025935.2	Tbc1d7	NP_080211.1	ILMN_2674221	002710242	S	1003	CACCTGCTCTACCAACTGGTTAGAAACAATAGTCTCACTGTGGTGCTCAA	13	-	43247157-43247206	13qA4	Mus musculus TBC1 domain family, member 7 (Tbc1d7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	2610009C09Rik	2610009C09Rik
Mus musculus	RefSeq	ILMN_214888	ILMN_214888	TBC1D7	NM_025935.2	NM_025935.2		67046	141803204	NM_025935.2	Tbc1d7	NP_080211.1	ILMN_2757268	002060441	S	496	TGGTGGAAGACAGTGTGGACTGTTACTGGATCAGCCGATGCTTCGTGAAG	13	-	43254670-43254719	13qA4	Mus musculus TBC1 domain family, member 7 (Tbc1d7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	2610009C09Rik	2610009C09Rik
Mus musculus	RefSeq	ILMN_188452	ILMN_258426	PCMT1	NM_008786.1	NM_008786.1		18537	6679216	NM_008786.1	Pcmt1	NP_032812.1	ILMN_2717374	000450064	S	193	CAGATAAAGTATTTGAAGTGATGCTGGCTACAGACCGTTCCCACTATGCA	10	-	7368887-7368936	10qA1	Mus musculus protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 (Pcmt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IDA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester [goid 4719] [evidence IDA]	PIMT; C79501	PIMT; C79501
Mus musculus	RefSeq	ILMN_188452	ILMN_258426	PCMT1	NM_008786.1	NM_008786.1		18537	6679216	NM_008786.1	Pcmt1	NP_032812.1	ILMN_1243273	005550367	S	1370	GGTGTTTGTAAATACTGAAACTTGAGACGACGATGATGGCAGGTGGTGTC	10	-	7350197-7350246	10qA1	Mus musculus protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 (Pcmt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IDA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester [goid 4719] [evidence IDA]	PIMT; C79501	PIMT; C79501
Mus musculus	RefSeq	ILMN_258426	ILMN_258426	PCMT1	NM_008786.1	NM_008786.1		18537	6679216	NM_008786.1	Pcmt1	NP_032812.1	ILMN_2888902	006860519	S	1392	TGAGACGACGATGATGGCAGGTGGTGTCCCAAAAACACTCAGCTGTTCCG	10	-	7350175-7350224	10qA1	Mus musculus protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 (Pcmt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IDA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester [goid 4719] [evidence IDA]	PIMT; C79501	PIMT; C79501
Mus musculus	RefSeq	ILMN_213779	ILMN_213779	OLFR91	NM_182714.1	NM_182714.1		258470	33238943	NM_182714.1	Olfr91	NP_874373.1	ILMN_2640691	002000441	S	552	CTCTCCTGTGGGGACACCACTTTTAATGAGATTCAGTTGGCTGTGTCCAG	17	-	37278469-37278518	17qB1	Mus musculus olfactory receptor 91 (Olfr91), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-20; bM573K1.3	MOR256-20; bM573K1.3
Mus musculus	Riken	ILMN_203829	ILMN_203829	A230077I10RIK	ri|A230077I10|PX00129O18|AK038943|1086					AK038943	A230077I10Rik		ILMN_1231135	006450053	S	1013	CACTGTGAGTTCCCAGTCAGCCTGTGAATGAGACCCTGTCTCCAAAGGAG										
Mus musculus	RefSeq	ILMN_218930	ILMN_218930	LYZ	NM_013590.2	NM_013590.2		17110	40254571	NM_013590.2	Lyz	NP_038618.1	ILMN_2878071	005720609	S	1087	GTTCCCAGTGTCATGAGGCATTCAGGAGGACTAGTGAGCTGTGCCTGTCC	10	-	116692033-116692082	10qD2	Mus musculus lysozyme (Lyz), mRNA.				Lzp-s	Lzp-s
Mus musculus	RefSeq	ILMN_207087	ILMN_239575	ARID5B	NM_023598.2	NM_023598.2		71371	74136556	NM_023598.2	Arid5b	NP_076087.2	ILMN_1214734	001990376	S	3925	TTTCAAAGGCAAGGGCAAGAAAGACTGGCACGGAATAGCCAGGGGATGCC	10	-	67558860-67558909	10qB5.1-qB5.2	Mus musculus AT rich interactive domain 5B (MRF1-like) (Arid5b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Mrf2; Mrf2alpha; AI467247; 4930580B11; Mrf2beta; Desrt; 5430435G07Rik	Mrf2; Mrf2alpha; AI467247; 4930580B11; Mrf2beta; Desrt; 5430435G07Rik
Mus musculus	RefSeq	ILMN_239575	ILMN_239575	ARID5B	NM_023598.2	NM_023598.2		71371	74136556	NM_023598.2	Arid5b	NP_076087.2	ILMN_3031781	001050168	I	184	GCTCCAGCTGTTGTGGGAAGAAAGGACCAGCCGGCAACTTTTATCCAGCT	10	-	67740736-67740785	10qB5.1-qB5.2	Mus musculus AT rich interactive domain 5B (MRF1-like) (Arid5b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Mrf2; Mrf2alpha; AI467247; 4930580B11; Mrf2beta; Desrt; 5430435G07Rik	Mrf2; Mrf2alpha; AI467247; 4930580B11; Mrf2beta; Desrt; 5430435G07Rik
Mus musculus	Riken	ILMN_203717	ILMN_203717	9630047G21RIK	ri|9630047G21|PX00116P16|AK036235|4188					AK036235	9630047G21Rik		ILMN_1219042	001090711	S	3876	CCCGCTTCCTAGCATTAGCAGTTTGATGGAGAACTGGGAGGAGCCAGCCC										
Mus musculus	RefSeq	ILMN_196868	ILMN_247246	LOC217390	XR_004454.1	XR_004454.1		217390	94393811	XR_004454.1	LOC217390		ILMN_1213262	006520709	S	801	GCTCCTAGGACACCCTTGGTCATAATTGCTGAAGATGGTGATGGAGAAGT				12qA1.1	PREDICTED: Mus musculus similar to heat shock protein 1 (chaperonin) (LOC217390), mRNA.					
Mus musculus	MEEBO	ILMN_191865	ILMN_191865	2410005O16RIK	scl25642.1.1_182				31560254	NM_025476	2410005O16Rik		ILMN_2482897	002350408	S	20	TTGAGAAAGTCGACCGTCTCTGGACTCAGGTTATTACCTCGGGCAGCTCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191865	ILMN_191865	2410005O16RIK	scl25642.1.1_182				31560254	NM_025476	2410005O16Rik		ILMN_2482896	006450403	S	19	TTTGAGAAAGTCGACCGTCTCTGGACTCAGGTTATTACCTCGGGCAGCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_206299	ILMN_206299	SLC35A3	ri|C130098A19|PX00172L08|AK082040|4426					AK082040	Slc35a3		ILMN_2579086	004610521	S	3994	CACTTCCAGAGGATTTGATGCTGTATTCTGGCCTCCATGGGTACAGGCAC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209210	ILMN_209210	PLCB4	NM_013829.2	NM_013829.2		18798	118130923	NM_013829.2	Plcb4	NP_038857.1	ILMN_2911248	002490086	S	3583	CGAGCAGGCGAAGGAGATGCAGCAGATGGTGAAATTGGAAGCCGAGATGG	2	+	135833639-135833645:135838702-135838744	2qF3	Mus musculus phospholipase C, beta 4 (Plcb4), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; The smooth endoplasmic reticulum (ER) has with no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER [goid 5790] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI854601; A930039J07Rik; C230058B11Rik	AI854601; A930039J07Rik; C230058B11Rik
Mus musculus	MEEBO	ILMN_217279	ILMN_217279	1700006E09RIK	scl40869.7.1_10	XM_126493.1			20913256	XM_126493.1	1700006E09Rik		ILMN_2681375	006620300	S	574	ACCGAGAAGACCCTAAGATCTCTTGGCTGCTCAGGATCTTAAGACATCGC										
Mus musculus	RefSeq	ILMN_210084	ILMN_210084	FOXP2	NM_212435.1	NM_212435.1		114142	46877059	NM_212435.1	Foxp2	NP_997600.1	ILMN_2659663	002940070	S	2182	CCTTTGCTAAGTAACCCTGGACTGATCAATAACGCCTCCAGTGGCCTCCT	6	+	15365893-15365942	6qA1	Mus musculus forkhead box P2 (Foxp2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IGI]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IGI]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; A behavioral process whose outcome is a relatively long-lasting adaptive behavioral change whereby an organism modifies innate vocalizations to imitate or create new sounds [goid 42297] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	AI449000; D0Kist7; CAG-16; 2810043D05Rik	AI449000; D0Kist7; CAG-16; 2810043D05Rik
Mus musculus	RefSeq	ILMN_210084	ILMN_210084	FOXP2	NM_212435.1	NM_212435.1		114142	46877059	NM_212435.1	Foxp2	NP_997600.1	ILMN_2659660	004260026	S	2177	GCTTGCCTTTGCTAAGTAACCCTGGACTGATCAATAACGCCTCCAGTGGC	6	+	15365888-15365937	6qA1	Mus musculus forkhead box P2 (Foxp2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IGI]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IGI]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; A behavioral process whose outcome is a relatively long-lasting adaptive behavioral change whereby an organism modifies innate vocalizations to imitate or create new sounds [goid 42297] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	AI449000; D0Kist7; CAG-16; 2810043D05Rik	AI449000; D0Kist7; CAG-16; 2810043D05Rik
Mus musculus	RefSeq	ILMN_185552	ILMN_261757	DRD4	NM_007878.2	NM_007878.2		13491	31982851	NM_007878.2	Drd4	NP_031904.1	ILMN_1217098	006380064	S	978	CTGCCGGTGGTAGTCGGGGCCTTCCTGGTGTGTTGGACGCCTTTCTTCGT	7	+	148480368-148480383:148480558-148480591	7qF5	Mus musculus dopamine receptor 4 (Drd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence IEA]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D4 receptors [goid 1593] [evidence IMP]	D4R; Drd-4; AW125663	D4R; Drd-4; AW125663
Mus musculus	RefSeq	ILMN_212640	ILMN_212640	PLEC1	NM_201392.1	NM_201392.1		18810	41322936	NM_201392.1	Plec1	NP_958794.1	ILMN_1235958	003370441	S	20	TCCCTTGTGCCTACTCTGCATTGAAGACCCTGCCACTTCTTGGGGTGTGC	15	-	76029767-76029816	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 9, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; AA591047; AU042537; PLTN; PCN	EBS1; AA591047; AU042537; PLTN; PCN
Mus musculus	MEEBO	ILMN_212062	ILMN_212062	ANK3	scl0003937.1_78	NM_170689.1			25121947	NM_170689.1	Ank3		ILMN_2622307	003830537	S	4912	TCTAGCATAGAGTCTCCCTTTAGGACCCCCAGTAGACTGAGTGACGGGCT						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	Riken	ILMN_201681	ILMN_201681	RPA2	ri|2610024F01|ZX00033D20|AK011530|824					AK011530	Rpa2		ILMN_2543737	001710553	S	705	CACGAGGGAGGCAGGGGCAGGCAGATAATCTGTGAGTTCAAGGCCAGCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [evidence ISO]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212680	ILMN_212680	PAPD4	NM_133905.2	NM_133905.2		100715	118129890	NM_133905.2	Papd4	NP_598666.1	ILMN_1227242	001050563	S	457	GAATAAGCGATGAAAAAGCTTTTCCTCTTGATGGTAAACGGCAGCGTTTC	13	-	93954219-93954268	13qC3	Mus musculus PAP associated domain containing 4 (Papd4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group [goid 4652] [evidence IEA]	8030446C20Rik; Gld2; AI649009	8030446C20Rik; Gld2; AI649009
Mus musculus	RefSeq	ILMN_212680	ILMN_212680	PAPD4	NM_133905.2	NM_133905.2		100715	118129890	NM_133905.2	Papd4	NP_598666.1	ILMN_1220586	004290044	S	473	AGCTTTTCCTCTTGATGGTAAACGGCAGCGTTTCCATTCACCCCACCAAG	13	-	93954203-93954252	13qC3	Mus musculus PAP associated domain containing 4 (Papd4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group [goid 4652] [evidence IEA]	8030446C20Rik; Gld2; AI649009	8030446C20Rik; Gld2; AI649009
Mus musculus	MEEBO	ILMN_189851	ILMN_189851	1110033C18RIK	scl38649.8.1_81				19527181	NM_133964	1110033C18Rik		ILMN_2464955	001820577	S	10	CCTCAGTTGGACCACCTGTGTATGTGACAACATAGGGTTTGGCCAGGCTG										
Mus musculus	RefSeq	ILMN_199811	ILMN_199811	LOC383046	XM_356821.1	XM_356821.1			38077537	XM_356821.1	LOC383046		ILMN_2536572	003060364	S	130	GACAACTTTCCTACCACATCAGACCCTGAATACTCCGACACAGCTGAAGC										
Mus musculus	Riken	ILMN_202950	ILMN_202950	A930019C19RIK	ri|A930019C19|PX00066F15|AK044527|1469					AK044527	A930019C19Rik		ILMN_2553561	004490280	S	1206	GGCAAGAGAATTGCAAGATCAAGGCCAGCCCAGCCAACCTTACAGGGTCC										
Mus musculus	RefSeq	ILMN_223517	ILMN_223517	NT5DC3	NM_175331.3	NM_175331.3		103466	111494222	NM_175331.3	Nt5dc3	NP_780540.2	ILMN_2942883	005570487	S	5557	CTCCAACACTACTTTGGGGACAGCTCCAGAGCTCCCTTTGGGGCTCCTAA	10	+	86300739-86300788	10qC1	Mus musculus 5'-nucleotidase domain containing 3 (Nt5dc3), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TU12B1-TY; C630002B14Rik; AU040402; AW540062	TU12B1-TY; C630002B14Rik; AU040402; AW540062
Mus musculus	RefSeq	ILMN_199053	ILMN_223517	NT5DC3	NM_175331.3	NM_175331.3		103466	111494222	NM_175331.3	Nt5dc3	NP_780540.2	ILMN_1229437	006290632	S	2019	CAAGTGAGACCTCTTGATGGCTGCCTGTGTTCCGTAGGTGGAGAGTGGAC	10	+	86297201-86297250	10qC1	Mus musculus 5'-nucleotidase domain containing 3 (Nt5dc3), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TU12B1-TY; C630002B14Rik; AU040402; AW540062	TU12B1-TY; C630002B14Rik; AU040402; AW540062
Mus musculus	RefSeq	ILMN_189961	ILMN_189961	TRPC7	NM_012035.2	NM_012035.2		26946	118129964	NM_012035.2	Trpc7	NP_036165.1	ILMN_1242557	006650370	S	3103	GTGACCTGTGACCTACTCTTAAGTGCCAGATGAGAACCCAGATAGCCTAA	13	-	56874655-56874704	13qB1	Mus musculus transient receptor potential cation channel, subfamily C, member 7 (Trpc7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of manganese (Mn) ions into, out of, within or between cells [goid 6828] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]	TRP7; Trrp8	TRP7; Trrp8
Mus musculus	RefSeq	ILMN_216091	ILMN_216091	UBE2Z	NM_172300.3	NM_172300.3		268470	110681728	NM_172300.3	Ube2z	NP_758504.3	ILMN_2774701	001260239	S	2790	GCCCTGGTTTTAAGTTGAGGAAATATATGCACAGGAGTCAAAGAGATGTC	11	-	95909879-95909928	11qD	Mus musculus ubiquitin-conjugating enzyme E2Z (putative) (Ube2z), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW049199; D11Moh35; C030047H17Rik; RP23-235J5.3	AW049199; D11Moh35; C030047H17Rik; RP23-235J5.3
Mus musculus	RefSeq	ILMN_200607	ILMN_200607	LOC384387	XM_357615.1	XM_357615.1			38084265	XM_357615.1	LOC384387		ILMN_1217602	001940593	S	983	ACATATCAAGGTGGAAGGGGGCATCTGTAAACTGGAACGGCTCAGACCCC										
Mus musculus	RefSeq	ILMN_238869	ILMN_238869	BC057022	NM_001004180.1	NM_001004180.1		433940	51921354	NM_001004180.1	BC057022	NP_001004180.1	ILMN_2997861	007560382	S	2356	CTGGGGACCAGTGGGAGGGTGACCTGGCTGTAACTGGAATACCCAATCCA	5	+	115062890-115062939	5qF	Mus musculus cDNA sequence BC057022 (BC057022), mRNA.				MGC67174	MGC67174
Mus musculus	RefSeq	ILMN_197371	ILMN_197371	LOC238726	XM_138722.3	XM_138722.3			38075384	XM_138722.3	LOC238726		ILMN_2527901	002970494	S	1002	AGTGTCCAAGAAAATGAGCCAATTAGAGAAGCGGATCTGGGGGGAACTAG										
Mus musculus	RefSeq	ILMN_222483	ILMN_232772	EEF1G	NM_026007.4	NM_026007.4		67160	142345473	NM_026007.4	Eef1g	NP_080283.3	ILMN_2777282	003890626	S	1503	CGCCTAGCTGCCTGCACCTACCCTTCAAGGGAGATGGGGGTCATTAAAGA	19	+	9052608-9052657	19qA	Mus musculus eukaryotic translation elongation factor 1 gamma (Eef1g), mRNA.	A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	MGC144724; EF1G; MGC144723; MGC103354; AA407312; 2610301D06Rik	MGC144724; EF1G; MGC144723; MGC103354; AA407312; 2610301D06Rik
Mus musculus	RefSeq	ILMN_197577	ILMN_197577	LOC229546	XM_143379.2	XM_143379.2			38076649	XM_143379.2	LOC229546		ILMN_1230469	004610528	S	57	GGGACAGGTCATCTATGGCAGTCCAAGCACACAGATGGAAGAATCCATGG										
Mus musculus	RefSeq	ILMN_219498	ILMN_219498	OLFR1305	NM_146401.1	NM_146401.1		258396	33238981	NM_146401.1	Olfr1305	NP_666513.1	ILMN_2709621	005220348	S	566	GCACAGATACTTATAAACTGGAGCTCATGATTACTGCCAATAGTGGGTTC	2	-	111713395-111713444	2qE3	Mus musculus olfactory receptor 1305 (Olfr1305), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR245-8	MOR245-8
Mus musculus	RefSeq	ILMN_214390	ILMN_214390	GNG4	NM_010317.2	NM_010317.2		14706	31542900	NM_010317.2	Gng4	NP_034447.1	ILMN_1244018	007560561	S	2703	AGGCAAGTCCAAGCTACAGTTCCATTTCCATACAGCACAGGCCTGGCAGG	13	+	13919897-13919946	13qA1	Mus musculus guanine nucleotide binding protein (G protein), gamma 4 (Gng4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]		
Mus musculus	RefSeq	ILMN_233716	ILMN_233716	OLFR872	NM_146560.1	NM_146560.1		258553	49170047	NM_146560.1	Olfr872	NP_666771.1	ILMN_3162342	000990736	S	831	CCTGAGGAACAGGGACATTAAAACTGCTCTTTGGCAGCTGCAGAGAAGAG	9	+	20065200-20065249	9qA3	Mus musculus olfactory receptor 872 (Olfr872), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR145-3	MOR145-3
Mus musculus	RefSeq	ILMN_221016	ILMN_221016	LIAS	NM_024471.2	NM_024471.2		79464	31981391	NM_024471.2	Lias	NP_077791.1	ILMN_2918987	005890554	S	1363	GGGTCTGATGGCTGATCGAAGCGGAATGGTGTATACCTGTAATTCCACCC	5	+	65688037-65688086	5qC3.1	Mus musculus lipoic acid synthetase (Lias), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid [goid 9107] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipoic acid, 1,2-dithiolane-3-pentanoic acid, a coenzyme involved in oxidative decarboxylation of keto acids [goid 9105] [evidence IGI]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein N6-(octanoyl)lysine + 2 sulfur + 2 S-adenosyl-L-methionine = protein N6-(lipoyl)lysine + 2 L-methionine + 2 5'-deoxyadenosyl [goid 16992] [evidence IEA]; Catalysis of the reaction: octanoic acid + 2 S = lipoic acid + 2 H [goid 17140] [evidence IPI]	mLip1; C77512; MGC7254; 2900022L22Rik; 4933425M12Rik	mLip1; C77512; MGC7254; 2900022L22Rik; 4933425M12Rik
Mus musculus	MEEBO	ILMN_193665	ILMN_193665	3110078M01RIK	scl13902.1.1_129						3110078M01Rik		ILMN_2499309	003290241	S	11	CTGCGACTTGACAGAGGCTTCGAGGTTCACACTTGCCAGTTTTATCCCTC										
Mus musculus	Riken	ILMN_204211	ILMN_204211	A130084H06RIK	ri|A130084H06|PX00125F06|AK038177|2649					AK038177	A130084H06Rik		ILMN_1257293	006660092	S	2261	GGTTGGCTCCACACCTCTGGTCCCTTAGCTACCGTGATGGCACTACAATC										
Mus musculus	RefSeq	ILMN_197589	ILMN_197589	LOC381458	XM_355411.1	XM_355411.1			38076706	XM_355411.1	LOC381458		ILMN_1213343	004730093	S	1421	TGCCAAGCACTAACAAGGGACTCATCAACTCCGGAAAAGTGAAGGCTGCC										
Mus musculus	RefSeq	ILMN_200850	ILMN_200850	LOC385401	XM_358225.1	XM_358225.1			38086559	XM_358225.1	LOC385401		ILMN_1247950	001940609	S	127	AGAGGAAAGAACTACTACCATGACTGCACAGGCAGGAAGATAGTGGCCGC										
Mus musculus	RefSeq	ILMN_200073	ILMN_200073	LOC385699	XM_358915.1	XM_358915.1			38080226	XM_358915.1	LOC385699		ILMN_1251541	004050176	S	717	GCCACTAGGCAGCTTTGTAACTGCTCTGGAGCCTCTCTCAAGTGTTGGAC										
Mus musculus	Riken	ILMN_203516	ILMN_203516	RYR2	ri|9330186F10|PX00106F14|AK034398|3792					AK034398	Ryr2		ILMN_1244015	003400470	S	3656	GCTTGGCCTTAGCATGTGGGAACCTGAAGCGAGGTTAGCGAGTGTGGGCA						Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IPI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caffeine stimulus. Caffeine is an alkaloid found in numerous plant species, where it acts as a natural pesticide that paralyzes and kills certain insects feeding upon them [goid 31000] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts [goid 5219] [evidence IDA]		
Mus musculus	Riken	ILMN_204400	ILMN_204400	A130003P22RIK	ri|A130003P22|PX00121M19|AK037292|1883					AK037292	A130003P22Rik		ILMN_1257646	006290646	S	1592	ATCCACACGGGGAAGTGCGGTGACAGAAGCCAGGGTCAGGAGTGCTGTAT										
Mus musculus	RefSeq	ILMN_199307	ILMN_199307	LOC331981	XM_285065.2	XM_285065.2			38094068	XM_285065.2	LOC331981		ILMN_2534787	004040619	S	38	CACCCATGGAATTATTCAATTTGTTGAAGCCTTTGCTCAACATCGTCTCC										
Mus musculus	RefSeq	ILMN_215172	ILMN_215172	FLRT2	NM_201518.1	NM_201518.1		399558	41462392	NM_201518.1	Flrt2	NP_958926.1	ILMN_2926842	003830437	S	2698	GTGTGCCAGATCTAGAGCATTGCCATACGTAACAGCCTAGAGGTCCAGCG	12	+	96176673-96176703:96176704-96176722	12qE	Mus musculus fibronectin leucine rich transmembrane protein 2 (Flrt2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA0405	KIAA0405
Mus musculus	MEEBO	ILMN_211004	ILMN_211004	FXR1H	scl0001994.1_3				4835728	AF124385	Fxr1h		ILMN_2611491	003170037	S	1160	TAGAGCTGAGTCTCAGAGCAGACAAAGAAACCTCCCAAGGGAAACTTTGG										
Mus musculus	MEEBO	ILMN_188920	ILMN_188920	ADCYAP1R1	scl1664.1.1_301				31542108	NM_007407	Adcyap1r1		ILMN_2717037	006250196	S	1534	AGCCACAGCGGGCTCAGCAGCACTCTTGCAAGATGTCAGAACTATCCACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence TAS];  [goid 4999] [evidence TAS]		
Mus musculus	MEEBO	ILMN_219411	ILMN_219411	SPINK3	scl51454.4.1_44	NM_009258.2			45433558	NM_009258.2	Spink3		ILMN_2708477	007610097	S	745	TGAACTCTGTTATGGCTACCGTAATGTTTGGCAAGTGGGTTCGTTGAATA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210905	ILMN_210905	CSF3R	NM_007782.1	NM_007782.1		12986	6681050	NM_007782.1	Csf3r	NP_031808.1	ILMN_1255648	006840040	S	2937	CAGTCCATTGAACTGATTGTAGGTTTTGAGTTGGGGCTGGTATTTTCAGA	4	+	125721326-125721375	4qD2.2	Mus musculus colony stimulating factor 3 receptor (granulocyte) (Csf3r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 4896] [evidence IEA]	MGC141472; Csfgr; G-CSFR; Cd114; MGC141473	MGC141472; Csfgr; G-CSFR; Cd114; MGC141473
Mus musculus	RefSeq	ILMN_210905	ILMN_210905	CSF3R	NM_007782.1	NM_007782.1		12986	6681050	NM_007782.1	Csf3r	NP_031808.1	ILMN_2806180	005900259	S	2867	TCTCACACTCTAAGGTTCAGATAGATACTGCTTACAGCCCAATGGTCACC	4	+	125721256-125721305	4qD2.2	Mus musculus colony stimulating factor 3 receptor (granulocyte) (Csf3r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 4896] [evidence IEA]	MGC141472; Csfgr; G-CSFR; Cd114; MGC141473	MGC141472; Csfgr; G-CSFR; Cd114; MGC141473
Mus musculus	RefSeq	ILMN_210905	ILMN_210905	CSF3R	NM_007782.1	NM_007782.1		12986	6681050	NM_007782.1	Csf3r	NP_031808.1	ILMN_2746501	000730291	S	75	GAGTGGTATTGTTAAGCCCCTTTTTCCTAAATGGAGAAACTGAGACTCAG	4	+	125703339-125703388	4qD2.2	Mus musculus colony stimulating factor 3 receptor (granulocyte) (Csf3r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 4896] [evidence IEA]	MGC141472; Csfgr; G-CSFR; Cd114; MGC141473	MGC141472; Csfgr; G-CSFR; Cd114; MGC141473
Mus musculus	RefSeq	ILMN_210905	ILMN_210905	CSF3R	NM_007782.1	NM_007782.1		12986	6681050	NM_007782.1	Csf3r	NP_031808.1	ILMN_2707409	001240450	S	979	GTGAACTTCGCTACCAGCCACAGCTCAAAGGAGCCAACTGGACTCTGGTG	4	+	125711537-125711583:125711666-125711668	4qD2.2	Mus musculus colony stimulating factor 3 receptor (granulocyte) (Csf3r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 4896] [evidence IEA]	MGC141472; Csfgr; G-CSFR; Cd114; MGC141473	MGC141472; Csfgr; G-CSFR; Cd114; MGC141473
Mus musculus	RefSeq	ILMN_210905	ILMN_210905	CSF3R	NM_007782.1	NM_007782.1		12986	6681050	NM_007782.1	Csf3r	NP_031808.1	ILMN_1241302	002630343	S	953	GCCCAGTGAGTACATGGAACAGGAGTGTGAACTTCGCTACCAGCCACAGC	4	+	125711511-125711560	4qD2.2	Mus musculus colony stimulating factor 3 receptor (granulocyte) (Csf3r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 4896] [evidence IEA]	MGC141472; Csfgr; G-CSFR; Cd114; MGC141473	MGC141472; Csfgr; G-CSFR; Cd114; MGC141473
Mus musculus	Riken	ILMN_203595	ILMN_203595	6030499A19RIK	ri|6030499A19|PX00058J06|AK031731|3475					AK031731	6030499A19Rik		ILMN_1231249	004850328	S	3302	GGTACTGAAGTTCCATTGCCATGAGTGCAAGCAGCATTTAGGAAGGGGGG										
Mus musculus	RefSeq	ILMN_221089	ILMN_313508	GPRASP2	XM_001481276.1	XM_001481276.1		245607	149272196	XM_001481276.1	Gprasp2	XP_001481326.1	ILMN_2730909	003140397	S	969	GCCACTCATCAGCCTTATGTTCCCAAAGAGTCCCAAATAGTGCTTTGGTG				XqF1	PREDICTED: Mus musculus G protein-coupled receptor associated sorting protein 2 (Gprasp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a G-protein-coupled receptor [goid 1664] [evidence ISO]		
Mus musculus	RefSeq	ILMN_216687	ILMN_216687	OLFR1220	NM_146900.1	NM_146900.1		258902	22129086	NM_146900.1	Olfr1220	NP_667111.1	ILMN_2798069	006590487	S	303	TGCTTTTCACTTCTTCACTGGTGCAGAGGTCATTGTCTTGGCAGCCATGG	2	-	88937730-88937779	2qE1	Mus musculus olfactory receptor 1220 (Olfr1220), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR233-5	MOR233-5
Mus musculus	RefSeq	ILMN_213366	ILMN_213366	RNF208	NM_176834.2	NM_176834.2		68846	119395755	NM_176834.2	Rnf208	NP_789804.2	ILMN_2636349	002570603	S	1244	ACCCTTTCTTGCCCACTGTGGCTTCTGGCCCTACCCTGCGTGGCATTGTC	2	+	25099692-25099741	2qA3	Mus musculus ring finger protein 208 (Rnf208), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110061N23Rik	1110061N23Rik
Mus musculus	RefSeq	ILMN_242264	ILMN_242264	GM962	NM_001033448.1	NM_001033448.1		381201	75677453	NM_001033448.1	Gm962	NP_001028620.1	ILMN_2950814	007040546	S	2743	AACTCCTGCCTACCAAAGGGCGTAGAGAGCCGTGTGTGGTGTCCACTTGG	19	+	5570912-5570961	19qA	Mus musculus gene model 962, (NCBI) (Gm962), mRNA.					
Mus musculus	Riken	ILMN_204996	ILMN_204996	9330197B14RIK	ri|9330197B14|PX00106L06|AK034460|2766					AK034460	9330197B14Rik		ILMN_1257594	004890025	S	2343	GGTTTCCAGTAAAGGCAAGGCAGCCACTGGCACATGGAAAGGCATGAAGC										
Mus musculus	MEEBO	ILMN_195167	ILMN_195167	2810026P18RIK	scl35518.1.341_30						2810026P18Rik		ILMN_2513173	000380035	S	18	CAATGGCGCCATTGTTCTTCGCGTCTTCAAAGCAGCTACAAGAAGAAACC										
Mus musculus	RefSeq	ILMN_214017	ILMN_209496	D2WSU81E	NM_172660.2	NM_172660.2		227695	141801856	NM_172660.2	D2Wsu81e	NP_766248.1	ILMN_1244281	004210195	S	1771	AGTCCTATGTGAAGTACCAGGTTATTGGGAAGAACCACGTGGCAGTGCCC	2	-	30029178-30029227	2qB	Mus musculus DNA segment, Chr 2, Wayne State University 81, expressed (D2Wsu81e), mRNA.				AL033358; 9930028P05; MGC90552	AL033358; 9930028P05; MGC90552
Mus musculus	RefSeq	ILMN_209496	ILMN_209496	D2WSU81E	NM_172660.2	NM_172660.2		227695	141801856	NM_172660.2	D2Wsu81e	NP_766248.1	ILMN_1230557	005870341	S	1564	ACGAAGAGCAATCCCGAGGCCCGCTCGATGCTCTCGATGGGCACCAGGAA	2	-	30029385-30029434	2qB	Mus musculus DNA segment, Chr 2, Wayne State University 81, expressed (D2Wsu81e), mRNA.				AL033358; 9930028P05; MGC90552	AL033358; 9930028P05; MGC90552
Mus musculus	RefSeq	ILMN_215660	ILMN_215660	SPARCL1	NM_010097.2	NM_010097.2		13602	31982799	NM_010097.2	Sparcl1	NP_034227.2	ILMN_1237917	000270523	S	2391	CCGCTTCAGAAATACGAGCAGCCATGACACTATACATTCATATGTAGCAA	5	-	104508419-104508468	5qE5	Mus musculus SPARC-like 1 (mast9, hevin) (Sparcl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Ecm2; mast9; hevin; Sc1	Ecm2; mast9; hevin; Sc1
Mus musculus	RefSeq	ILMN_216620	ILMN_216620	CLDN13	NM_020504.3	NM_020504.3		57255	142385852	NM_020504.3	Cldn13	NP_065250.1	ILMN_1245234	003800017	S	886	CAGGTTCTAGAATCATTGAACTGGAGGGAGGAAAGACAGGTCTACGGAGC	5	-	135390250-135390299	5qG2	Mus musculus claudin 13 (Cldn13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC144292; MGC144291; 2500004B14Rik	MGC144292; MGC144291; 2500004B14Rik
Mus musculus	RefSeq	ILMN_196769	ILMN_318968	LOC100038893	XM_001471782.1	XM_001471782.1		100038893	149255107	XM_001471782.1	LOC100038893	XP_001471832.1	ILMN_2673169	007380753	S	793	TGGAGGATGTGTATTTTTATCTAAAAGAAGACTAGAAGATACTAACTGTA	6	-	129963416-129963465	6qF3	PREDICTED: Mus musculus hypothetical protein LOC100038893 (LOC100038893), mRNA.					
Mus musculus	RefSeq	ILMN_212060	ILMN_212060	HNRNPUL1	NM_178089.2	NM_178089.2		232989	31342548	NM_178089.2	Hnrnpul1	NP_835190.1	ILMN_1239335	006250059	S	1114	CTCTTGAAAAGTTTACACACTCGTGGCTATGAACATGTCTTTTCCTGTGC	7	-	26521685-26521734	7qA3	Mus musculus heterogeneous nuclear ribonucleoprotein U-like 1 (Hnrnpul1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E1BAP5; E130317O14Rik; E1B-AP5; MGC78330; MGC36621	E1BAP5; E130317O14Rik; E1B-AP5; MGC78330; MGC36621
Mus musculus	RefSeq	ILMN_212060	ILMN_212060	HNRNPUL1	NM_178089.2	NM_178089.2		232989	31342548	NM_178089.2	Hnrnpul1	NP_835190.1	ILMN_2675170	000510497	S	764	ATCCATTGACGATTGAGGGCTTTGCATACCTGTGGTCAGGAGCCCGTGCC	7	-	26530153-26530202	7qA3	Mus musculus heterogeneous nuclear ribonucleoprotein U-like 1 (Hnrnpul1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E1BAP5; E130317O14Rik; E1B-AP5; MGC78330; MGC36621	E1BAP5; E130317O14Rik; E1B-AP5; MGC78330; MGC36621
Mus musculus	Riken	ILMN_205595	ILMN_205595	MAP3K4	ri|9630008E23|PX00115I21|AK035823|3816					AK035823	Map3k4		ILMN_2573761	001230689	S	3582	AGCTGGCCTTGAACTCACAGAACTCTGCCTACCTCAGTCTCTGGGATGCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214070	ILMN_314293	LOC100045607	XM_001474590.1	XM_001474590.1		100045607	149270601	XM_001474590.1	LOC100045607	XP_001474640.1	ILMN_2643910	004210500	S	173	ACAAGATCGCGGGCCCTGCAGTGGCAGGCCAGCTCCCATATCCCCTATGG					PREDICTED: Mus musculus similar to hCG1807877 (LOC100045607), mRNA.					
Mus musculus	MEEBO	ILMN_194964	ILMN_194964	1700024J04RIK	scl071848.1_314						1700024J04Rik		ILMN_2511283	006860204	S	19	TAAATTTAGTATAATATCACATTCTATGTTAGCGTCATTTTGACACTTAA										
Mus musculus	RefSeq	ILMN_243595	ILMN_243595	BCAT1	NM_007532.2	NM_007532.2		12035	66792793	NM_007532.2	Bcat1	NP_031558.2	ILMN_3131478	000430561	A	2101	GAGACTAGGGGTCCTGTGCCTTCTAGATCTTTGCATCCTCAAAGCCCAGC	6	-	144956621-144956670	6qG3	Mus musculus branched chain aminotransferase 1, cytosolic (Bcat1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9082] [evidence IEA]; The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9081] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9083] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid. Includes catalysis of the reaction: L-leucine + 2-oxoglutarate = 4-methyl-2-oxopentanoate + L-glutamate and anaologous reactions involving L-isoleucine and L-valine [goid 4084] [evidence IDA]	Eca39; BCATc	Eca39; BCATc
Mus musculus	RefSeq	ILMN_187736	ILMN_324448	LOC100045341	XR_031186.1	XR_031186.1		100045341	149274378	XR_031186.1	LOC100045341		ILMN_1227420	006250315	S	504	CCTAGCAACGGTCGTACTAACTACAATGAGAAGTTCAAGAGCAAGGCCAC					PREDICTED: Mus musculus similar to RGD1359202 protein (LOC100045341), misc RNA.					
Mus musculus	Riken	ILMN_206993	ILMN_206993	NEO1	ri|5930405G04|PX00646E07|AK077830|2792					AK077830	Neo1		ILMN_1253848	000010750	S	2398	CCTAGTACCACATTGAGCATCACATAACCCTCTTATTTGGGGGCTAGGGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198563	ILMN_198563	LOC233040	XM_133309.4	XM_133309.4			38086186	XM_133309.4	LOC233040		ILMN_1251402	000010010	S	1019	GGGCCAGTCTACACCGTGATTCCTCACTTTATGGCTGTCACAGGGCAGAG										
Mus musculus	RefSeq	ILMN_209101	ILMN_323968	ZFP655	NM_001083958.1	NM_001083958.1		72611	145301562	NM_001083958.1	Zfp655	NP_001077427.1	ILMN_2592530	004670767	S	305	TCTTCCCCATGAGGGAAGCCCAGGAGACCAGGCAGCTGCGCTCCTGACAG				5qG2	Mus musculus zinc finger protein 655 (Zfp655), transcript variant 2, mRNA.				2700038I16Rik; mKIAA4222; KIAA4222; 9030409O18Rik	2700038I16Rik; mKIAA4222; KIAA4222; 9030409O18Rik
Mus musculus	RefSeq	ILMN_209101	ILMN_323968	ZFP655	NM_001083958.1	NM_001083958.1		72611	145301562	NM_001083958.1	Zfp655	NP_001077427.1	ILMN_2747614	003130017	S	1128	GTGTTCTTAATGCTGTCTTTGATAGAGGGGAAGTAGGGGGGACAGAAACT				5qG2	Mus musculus zinc finger protein 655 (Zfp655), transcript variant 2, mRNA.				2700038I16Rik; mKIAA4222; KIAA4222; 9030409O18Rik	2700038I16Rik; mKIAA4222; KIAA4222; 9030409O18Rik
Mus musculus	RefSeq	ILMN_213095	ILMN_310606	D830039M14RIK	XR_035204.1	XR_035204.1		320949	149261241	XR_035204.1	D830039M14Rik		ILMN_1228713	006980608	S	2125	CCAAGTAGAGGGCAGAGCAATCAGTAGTTGTTAAAGGACATAAAGATGCC				10qB4	PREDICTED: Mus musculus RIKEN cDNA D830039M14 gene (D830039M14Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_213095	ILMN_310606	D830039M14RIK	XR_035204.1	XR_035204.1		320949	149261241	XR_035204.1	D830039M14Rik		ILMN_2633583	001850070	S	1414	GATCGGGGAACTTTGGAAAACGCAAAGAAACGCTAATTGAAGCCGCACTG				10qB4	PREDICTED: Mus musculus RIKEN cDNA D830039M14 gene (D830039M14Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_222248	ILMN_222248	INSC	NM_173767.2	NM_173767.2		233752	31343387	NM_173767.2	Insc	NP_776128.1	ILMN_1253062	003520397	S	1564	GGCTAACATGACAGGTTGTCACAGGTGACTCCCCTTCATACTGCTCCCTC	7	+	121993641-121993690	7qF1	Mus musculus inscuteable homolog (Drosophila) (Insc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C730020D23; MGC107593; 3830422K02Rik	C730020D23; MGC107593; 3830422K02Rik
Mus musculus	RefSeq	ILMN_219054	ILMN_219054	DVL3	NM_007889.2	NM_007889.2		13544	117168286	NM_007889.2	Dvl3	NP_031915.2	ILMN_2703618	006280411	S	1353	ATCCACAGTGACATGGCGGCCATCGTAAAAGCCATGGCCTCCCCTGAGTC	16	+	20527045-20527094	16qA3	Mus musculus dishevelled 3, dsh homolog (Drosophila) (Dvl3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210722	ILMN_210722	CYP2J5	NM_010007.4	NM_010007.4		13109	142385606	NM_010007.4	Cyp2j5	NP_034137.1	ILMN_2608511	001090523	S	1859	CATAAACAAAGTTCTTATATGAGTCAGAATCAGAGGAAATGGTAAACTAA	4	-	96295865-96295914	4qC5	Mus musculus cytochrome P450, family 2, subfamily j, polypeptide 5 (Cyp2j5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_247763	ILMN_247763	EG668668	NM_001081036.1	NM_001081036.1		668668	124486639	NM_001081036.1	EG668668	NP_001074505.1	ILMN_2890533	007570762	S	541	CATCAAGTTTGACACTGGGAACCTGTGTATGGTGACTGGAGGTGCTAACT				7qB4	Mus musculus predicted gene, EG668668 (EG668668), mRNA.					
Mus musculus	RefSeq	ILMN_218960	ILMN_218960	PIM1	NM_008842.3	NM_008842.3		18712	148540085	NM_008842.3	Pim1	NP_032868.2	ILMN_2702406	005860039	S	1114	TGCGTGACGATGCAGGGACAGCAATGACAACTCATTCCAGACTCCAGGTC				17qA3.3	Mus musculus proviral integration site 1 (Pim1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]	Pim-1	Pim-1
Mus musculus	RefSeq	ILMN_217257	ILMN_258384	EG629595	XM_894495.2	XM_894495.2		629595	94393139	XM_894495.2	EG629595	XP_899588.1	ILMN_2681030	002060209	S	240	GCTCTGTAAGGAGGTTCCGAACTATAAGCTTATTACTCCAGCCGTGGTCT	12	+	111554370-111554419	12qF1	PREDICTED: Mus musculus predicted gene, EG629595 (EG629595), mRNA.					
Mus musculus	RefSeq	ILMN_212189	ILMN_212189	EPS8	NM_007945.2	NM_007945.2		13860	75677396	NM_007945.2	Eps8	NP_031971.2	ILMN_2623776	004280725	S	2453	GGTCTGTCTGCCCGGAAGGTGCCAGAGTCTTTAACCAAATCACTGTTCAG	6	-	137430687-137430736	6qG1	Mus musculus epidermal growth factor receptor pathway substrate 8 (Eps8), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW261790	AW261790
Mus musculus	MEEBO	ILMN_186431	ILMN_186431	USF1	scl022278.1_12	NM_009480.1			6678520	NM_009480.1	Usf1		ILMN_2436330	001980482	S	16	CGGTGTCAATCTTGTTTTTCCTCATCATTTCCTCTCCGTGCAGGTGGAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter [goid 432] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186431	ILMN_186431	USF1	scl022278.1_12	NM_009480.1			6678520	NM_009480.1	Usf1		ILMN_2518938	000460605	S	3	TTTCCCCGGCTCTGGCAGCTGGGGCGCAGGCGAGCTGGGCTGGGACCGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter [goid 432] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	Riken	ILMN_203245	ILMN_203245	RNF23	ri|E130103K13|PX00091J08|AK053507|1467					AK053507	Rnf23		ILMN_1228186	000070494	S	1175	TACTTTGCAGTCCTAGAACTTACTGTACCTAGTGCCCAAAGGGGGTGGGC										
Mus musculus	RefSeq	ILMN_216163	ILMN_216163	ARL1	NM_025859.1	NM_025859.1		104303	13385339	NM_025859.1	Arl1	NP_080135.1	ILMN_1219577	005820553	S	1647	GATAAGGGATACGGTCCACACTATCCCAAATGGCTGTTTGATGAATTCAC	10	+	88173787-88173836	10qC1	Mus musculus ADP-ribosylation factor-like 1 (Arl1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AU019749; 2310008D22Rik	AU019749; 2310008D22Rik
Mus musculus	MEEBO	ILMN_221109	ILMN_221109	A230097C02	scl31262.22.1_71	NM_177892.2			31342738	NM_177892.2	A230097C02		ILMN_1236551	003800121	S	2921	CTACACATGTGGTTATTGAGAAATGTGTCTAATGGCGCAGTCCAGCCAGG										
Mus musculus	RefSeq	ILMN_219974	ILMN_219974	PTGER4	NM_008965.1	NM_008965.1		19219	6679530	NM_008965.1	Ptger4	NP_032991.1	ILMN_2715903	006200670	S	2323	AACAACCTAAAATATATTTTCCAAGCTATATATAATAATGAAAAATAAAA	15	-	5183934-5183983	15qA1	Mus musculus prostaglandin E receptor 4 (subtype EP4) (Ptger4), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence TAS]; Combining with a prostaglandin (PG) to initiate a change in cell activity [goid 4955] [evidence IEA]	Ptgerep4; EP4	Ptgerep4; EP4
Mus musculus	RefSeq	ILMN_216165	ILMN_216165	KLRE1	NM_153590.3	NM_153590.3		243655	146219823	NM_153590.3	Klre1	NP_705818.3	ILMN_1239346	000940398	S	513	GCGTGCCTGCTTGTCTCTTAACTCCAGTCTCATAAGGATGAACAAAGAGG				6qF3	Mus musculus killer cell lectin-like receptor family E member 1 (Klre1), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]; The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity [goid 45954] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a C-type lectin receptor capable of cellular activation [goid 2223] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IDA]	Klre-1; NKG2I	Klre-1; NKG2I
Mus musculus	RefSeq	ILMN_227089	ILMN_227089	PTPRK	NM_008983.1	NM_008983.1		19272	6679560	NM_008983.1	Ptprk	NP_033009.1	ILMN_2879600	002100398	S	5450	CCCCGGAGCAGTATCGTTTTTGCTATGATGTGGCGTTAGAGTACCTGGAG				10qA4	Mus musculus protein tyrosine phosphatase, receptor type, K (Ptprk), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	AI853699	AI853699
Mus musculus	RefSeq	ILMN_192043	ILMN_227089	PTPRK	NM_008983.1	NM_008983.1		19272	6679560	NM_008983.1	Ptprk	NP_033009.1	ILMN_2670565	007040553	S	5846	TTTGTAAGTGGCATTTCCCTCTCTTTTTGGGGTAAAAACTGTGGGACCCC				10qA4	Mus musculus protein tyrosine phosphatase, receptor type, K (Ptprk), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	AI853699	AI853699
Mus musculus	RefSeq	ILMN_193579	ILMN_247901	TGFB2	NM_009367.2	NM_009367.2		21808	142370644	NM_009367.2	Tgfb2	NP_033393.1	ILMN_1225196	000770754	S	3951	AGGCTTAGCTAGGGTTTAAGAATCTCAACTCAGAGTCTTAGTGACTGGGC	1	-	188447786-188447835	1qH5	Mus musculus transforming growth factor, beta 2 (Tgfb2), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of keratinocyte differentiation [goid 45617] [evidence NAS]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42416] [evidence IMP]; The process of apoptosis in activated T cells [goid 6924] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IDA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]	Interacting selectively with the transforming growth factor beta receptor [goid 5160] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence TAS]	Tgf-beta2; BB105277; Tgfb-2	Tgf-beta2; BB105277; Tgfb-2
Mus musculus	RefSeq	ILMN_216402	ILMN_216402	FXYD4	NM_033648.1	NM_033648.1		108017	16258806	NM_033648.1	Fxyd4	NP_387468.1	ILMN_2670751	007040139	S	224	GCCTGCAGCTGGGAGGATTGATTTTTGGAGGGCTCCTGTGCATCGCTGGA	6	-	117884459-117884508	6qF1	Mus musculus FXYD domain-containing ion transport regulator 4 (Fxyd4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Chif; MGC107631; 0610008I02Rik; AI267073	Chif; MGC107631; 0610008I02Rik; AI267073
Mus musculus	RefSeq	ILMN_216402	ILMN_216402	FXYD4	NM_033648.1	NM_033648.1		108017	16258806	NM_033648.1	Fxyd4	NP_387468.1	ILMN_1215552	000510520	S	219	GAGAGCCTGCAGCTGGGAGGATTGATTTTTGGAGGGCTCCTGTGCATCGC	6	-	117884464-117884513	6qF1	Mus musculus FXYD domain-containing ion transport regulator 4 (Fxyd4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Chif; MGC107631; 0610008I02Rik; AI267073	Chif; MGC107631; 0610008I02Rik; AI267073
Mus musculus	RefSeq	ILMN_227889	ILMN_227889	1810049H19RIK	NM_001003405.1	NM_001003405.1		435889	51010908	NM_001003405.1	1810049H19Rik	NP_001003405.1	ILMN_3104915	002360632	A	465	GGTGTGAACAACCCAGACCTGCTTCAATGCCTGGATGCCCCATTGCTACC	6	-	41241389-41241436:41241794-41241795	6qB1	Mus musculus RIKEN cDNA 1810049H19 gene (1810049H19Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Tesp4	Tesp4
Mus musculus	RefSeq	ILMN_210328	ILMN_210328	KRT82	NM_053249.2	NM_053249.2		114566	24475741	NM_053249.2	Krt82	NP_444479.1	ILMN_2604475	003140364	S	1597	CAATTCGTGCAGCCGCTAGTGTTAGCGCTACTCAGATTCTGAAATTGCTG	15	-	101372108-101372139:101372140-101372157	15qF2	Mus musculus keratin 82 (Krt82), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt2-20; MGC124293	Krt2-20; MGC124293
Mus musculus	RefSeq	ILMN_210328	ILMN_210328	KRT82	NM_053249.2	NM_053249.2		114566	24475741	NM_053249.2	Krt82	NP_444479.1	ILMN_1227153	004830561	S	1830	CACAGAGAAGGGGGTTTTATTGTCTCTGTCACCTGGGGTAGCAAGTCAAC	15	-	101371875-101371924	15qF2	Mus musculus keratin 82 (Krt82), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt2-20; MGC124293	Krt2-20; MGC124293
Mus musculus	RefSeq	ILMN_210328	ILMN_210328	KRT82	NM_053249.2	NM_053249.2		114566	24475741	NM_053249.2	Krt82	NP_444479.1	ILMN_2927369	006560333	S	2032	CCCTCTGGCTCTCAAATAGCTAAGAAAATTGAACTCATAGGACCCACCTG	15	-	101371673-101371722	15qF2	Mus musculus keratin 82 (Krt82), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt2-20; MGC124293	Krt2-20; MGC124293
Mus musculus	RefSeq	ILMN_215862	ILMN_215862	PGLS	NM_025396.3	NM_025396.3		66171	146134913	NM_025396.3	Pgls	NP_079672.1	ILMN_2664548	000540544	S	795	TTCCACATTGTAGGGGGTGCGCCATGCACGCCGTGGGCACTTCGGGTGTT				8qB3.3	Mus musculus 6-phosphogluconolactonase (Pgls), mRNA.		The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate [goid 17057] [evidence IEA]	1110030K05Rik; Plgs	1110030K05Rik; Plgs
Mus musculus	RefSeq	ILMN_224102	ILMN_253243	SLC16A13	NM_172371.3	NM_172371.3		69309	146149223	NM_172371.3	Slc16a13	NP_758959.1	ILMN_1212959	005900717	S	2282	TGGATCTTTGTTCCTCCTAGGCTAACAAGGGCAGATCAAAACGCAAGGAA				11qB3	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 13 (Slc16a13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	RP23-198E14.5; 1700007D07Rik	RP23-198E14.5; 1700007D07Rik
Mus musculus	RefSeq	ILMN_209366	ILMN_209366	MPP2	NM_016695.2	NM_016695.2		50997	142347754	NM_016695.2	Mpp2	NP_057904.1	ILMN_2595163	002470239	S	3787	GGGAACAGAGGCTGTGAGCCTCCTCAGCTCACCTTGCACGTGTTAGAACA	11	-	101918568-101918617	11qD	Mus musculus membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) (Mpp2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D11Bwg0652e; Pals4; Dlg2; Dlgh2	D11Bwg0652e; Pals4; Dlg2; Dlgh2
Mus musculus	RefSeq	ILMN_260176	ILMN_260176	FRS2	NM_177798.3	NM_177798.3		327826	31560836	NM_177798.3	Frs2	NP_808466.1	ILMN_2993711	007560195	S	5119	GCTCGCTGCCTGGTTCCCAACCCTGCGTCCTCAATGTTCAGGGTGTAACA	10	-	116507698-116507747	10qD2	Mus musculus fibroblast growth factor receptor substrate 2 (Frs2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IDA]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Establishment and formation of the optic placode, paired ectodermal placodes that become invaginated to form the embryonic lens vesicles [goid 46619] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 5069] [evidence IDA]	C330018A15Rik; 4732458E18; Frs2alpha; SNT1	C330018A15Rik; 4732458E18; Frs2alpha; SNT1
Mus musculus	RefSeq	ILMN_219167	ILMN_219167	1200003C05RIK	NM_024205.1	NM_024205.1		104771	21312773	NM_024205.1	1200003C05Rik	NP_077167.1	ILMN_2943319	002070682	S	535	TATTACGCGTTCTGCTTGGTGTTAATGATGCTTCTGCGGCCTCTCCTGGT	12	+	73195692-73195741	12qC3	Mus musculus RIKEN cDNA 1200003C05 gene (1200003C05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AI256468; Jamp	AI256468; Jamp
Mus musculus	RefSeq	ILMN_219167	ILMN_219167	1200003C05RIK	NM_024205.1	NM_024205.1		104771	21312773	NM_024205.1	1200003C05Rik	NP_077167.1	ILMN_1223051	000110181	S	64	GTCGATATTCAACCAGCATGCCTTGGACTCTACTGTGGGAAGACCCTATT	12	+	73190304-73190353	12qC3	Mus musculus RIKEN cDNA 1200003C05 gene (1200003C05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AI256468; Jamp	AI256468; Jamp
Mus musculus	RefSeq	ILMN_219167	ILMN_219167	1200003C05RIK	NM_024205.1	NM_024205.1		104771	21312773	NM_024205.1	1200003C05Rik	NP_077167.1	ILMN_2734290	001430068	S	938	CTGCAAAATTTACCGAACCATCACGGATACTCTCAGAAGGGGCCAATGGA	12	+	73201760-73201809	12qC3	Mus musculus RIKEN cDNA 1200003C05 gene (1200003C05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AI256468; Jamp	AI256468; Jamp
Mus musculus	RefSeq	ILMN_219912	ILMN_219912	CBR1	NM_007620.2	NM_007620.2		12408	113680351	NM_007620.2	Cbr1	NP_031646.2	ILMN_1236522	005080255	S	668	AGAAAGGAGTCCATGCGGAAGAAGGTTGGCCTAATAGTGCATATGGGGTC	16	+	93610181-93610230	16qC4	Mus musculus carbonyl reductase 1 (Cbr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: R-CHOH-R' + NADP+ = R-CO-R' + NADPH + H+ [goid 4090] [evidence TAS]	CR; Cbr; AW261796	CR; Cbr; AW261796
Mus musculus	Riken	ILMN_204819	ILMN_204819	C630002C17RIK	ri|C630002C17|PX00083G16|AK049826|2204					AK049826	C630002C17Rik		ILMN_1259933	007400037	S	1983	CGCTATGGCGCACCGGAAACATTAGTGAGAAAAAGCGCCCACATCTGCGG										
Mus musculus	RefSeq	ILMN_212258	ILMN_212258	PSPH	NM_133900.3	NM_133900.3		100678	142372741	NM_133900.3	Psph	NP_598661.1	ILMN_2624497	006280079	S	1365	AATATGACTACTAATTACATGGAGAATTTTATACTCTGAATTCTTTGTGT	5	-	130271507-130271556	5qG1.3	Mus musculus phosphoserine phosphatase (Psph), mRNA.		The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6564] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate [goid 4647] [evidence IEA]	PSP; AI480570; PSPase	PSP; AI480570; PSPase
Mus musculus	RefSeq	ILMN_190968	ILMN_261163	SULT1A1	NM_133670.1	NM_133670.1		20887	19526821	NM_133670.1	Sult1a1	NP_598431.1	ILMN_2745370	004070215	S	1096	GAGTGGATATGGCTATACTGGGAACCAAGGCAAGCTGACACAGCCCATCA	7	-	133816608-133816657	7qF3	Mus musculus sulfotransferase family 1A, phenol-preferring, member 1 (Sult1a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + L-tyrosine methyl ester = adenosine 3',5'-bisphosphate + L-tyrosine methyl ester 4-sulfate [goid 17067] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IDA]	PST; Stp1; Stp; AI266890	PST; Stp1; Stp; AI266890
Mus musculus	RefSeq	ILMN_214585	ILMN_214585	OLFR860	NM_146528.1	NM_146528.1		258521	33239277	NM_146528.1	Olfr860	NP_666739.1	ILMN_2649548	002370497	S	585	TAGCATAGTTATATTTCTTGTCAGTATCATTGTTGGATTCCTCCCTGCCT	9	-	19650427-19650476	9qA3	Mus musculus olfactory receptor 860 (Olfr860), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR146-2	MOR146-2
Mus musculus	RefSeq	ILMN_196482	ILMN_196482	4933413A10	XM_144520.3	XM_144520.3			38083208	XM_144520.3	4933413A10		ILMN_2524443	000380653	S	1646	TGTGCAAAGCAGCAGTTCTGAGCAGCAGAGGCACCCGAGCACCAGTAGCT										
Mus musculus	RefSeq	ILMN_193711	ILMN_235647	SCN7A	NM_009135.1	NM_009135.1		20272	33469088	NM_009135.1	Scn7a	NP_033161.1	ILMN_2656777	003290465	S	5244	CGAGGAGAAGGCATCTATTCAGACCCAGATTTAATGACACTTCCCACTTC	2	-	66513522-66513554:66513555-66513571	2qC1.3	Mus musculus sodium channel, voltage-gated, type VII, alpha (Scn7a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	1110034K09Rik; Nav2.3; Nav2; AI642000; Nax; NaG; Scn6a	1110034K09Rik; Nav2.3; Nav2; AI642000; Nax; NaG; Scn6a
Mus musculus	RefSeq	ILMN_203040	ILMN_222501	MAPK1IP1L	NM_178684.5	NM_178684.5		218975	146198844	NM_178684.5	Mapk1ip1l	NP_848799.1	ILMN_1246496	000630300	S	2429	CCAGCCTGAGTATTGGAGCCCTGGAACATATTGTCACTGCCCTGCCTACC				14qC1	Mus musculus mitogen-activated protein kinase 1 interacting protein 1-like (Mapk1ip1l), mRNA.				9130202B12	9130202B12
Mus musculus	RefSeq	ILMN_204573	ILMN_222501	MAPK1IP1L	NM_178684.5	NM_178684.5		218975	146198844	NM_178684.5	Mapk1ip1l	NP_848799.1	ILMN_1254935	001170630	S	2504	CAGTTGCCAAGTTCATCAGCCAGTGTGGGGTTTTGTTGTTCTTTGTAGGG				14qC1	Mus musculus mitogen-activated protein kinase 1 interacting protein 1-like (Mapk1ip1l), mRNA.				9130202B12	9130202B12
Mus musculus	RefSeq	ILMN_213289	ILMN_213289	TRIM68	NM_198012.1	NM_198012.1		101700	37574099	NM_198012.1	Trim68	NP_932129.1	ILMN_2635642	006650692	S	2220	CAGCCTTGTTTCCTACAGAGCTTCGGGAAGTAAGATTTTAAAGATTGTAA	7	-	109826141-109826190	7qE3	Mus musculus tripartite motif containing 68 (Trim68), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rnf137; AI894158; SS-56; F730114J12Rik	Rnf137; AI894158; SS-56; F730114J12Rik
Mus musculus	Riken	ILMN_205340	ILMN_205340	A630038P11RIK	ri|A630038P11|PX00145N24|AK041799|2804					AK041799	A630038P11Rik		ILMN_1233452	005720270	S	2707	CTGACCTTGGGTTCTCTGGAAAAGCAGTGTGTTCTCTTAACCTCTGAGCC										
Mus musculus	MEEBO	ILMN_221761	ILMN_221761	C130076O07RIK	scl43239.32_393	XM_147660.1			20849253	XM_147660.1	C130076O07Rik		ILMN_1225309	000580768	S	827	GCAACAGGCACACTCCAGAACCTGAGAAACCTGACCAGTGCTTAATTAGG										
Mus musculus	RefSeq	ILMN_228654	ILMN_228654	GM826	NM_001033411.1	NM_001033411.1		329554	85701920	NM_001033411.1	Gm826	NP_001028583.1	ILMN_3007971	001980484	S	387	ATGGCCACTTCCTTCTACAGAGAAGCATCGGCAGTGGGCTGAGCGGTCCT	2	-	160003502-160003508:160009426-160009456:160018537-160018548	2qH2	Mus musculus gene model 826, (NCBI) (Gm826), mRNA.					
Mus musculus	RefSeq	ILMN_229700	ILMN_229700	GM561	NM_001033297.1	NM_001033297.1		228715	85701805	NM_001033297.1	Gm561	NP_001028469.1	ILMN_2781798	003780161	S	290	CCACTCAAAGGTTCCTGACCTATCTGAAGTCATGGACTGGTGGGCCTGGC	2	+	144286637-144286686	2qG1	Mus musculus gene model 561, (NCBI) (Gm561), mRNA.					
Mus musculus	RefSeq	ILMN_210496	ILMN_210496	DPT	NM_019759.2	NM_019759.2		56429	118130574	NM_019759.2	Dpt	NP_062733.1	ILMN_2606210	003830470	S	1272	GCAGACCCAACAGTGAGAATGAATATGAGGGCCAGGAAAACCTGTGCGAA	1	+	166754033-166754082	1qH2.2	Mus musculus dermatopontin (Dpt), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Eq1; 1810032B19Rik; 5033416F05Rik; EQ-1	Eq1; 1810032B19Rik; 5033416F05Rik; EQ-1
Mus musculus	RefSeq	ILMN_218465	ILMN_218465	PIP4K2C	NM_054097.2	NM_054097.2		117150	31543483	NM_054097.2	Pip4k2c	NP_473438.1	ILMN_2696191	000060673	S	3112	CCCTCAAGCAACCTTTCCCCTGTTGAATGCAATAAGTGACTCCGGTCCCT	10	-	126634259-126634308	10qD3	Mus musculus phosphatidylinositol-5-phosphate 4-kinase, type II, gamma (Pip4k2c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 5-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16309] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216236	ILMN_216236	LRRTM1	NM_028880.2	NM_028880.2		74342	27753992	NM_028880.2	Lrrtm1	NP_083156.2	ILMN_1216892	003360382	S	2720	AGCAAGCTGCCCACATGTTTATGCAGAACTGCTAACCCACGGGAACTGCG	6	+	77187102-77187151	6qC3	Mus musculus leucine rich repeat transmembrane neuronal 1 (Lrrtm1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW125451; 4632401D06Rik	AW125451; 4632401D06Rik
Mus musculus	Riken	ILMN_203472	ILMN_203472	6430509H20RIK	ri|6430509H20|PX00045K05|AK032237|3451					AK032237	6430509H20Rik		ILMN_2557554	002140152	S	161	GCTGCTACTCTGCCTGCTCGGCTGCCACGTTTGGAAGGCAGTCACCAAGA										
Mus musculus	RefSeq	ILMN_214860	ILMN_240285	PDZD2	NM_001081064.1	NM_001081064.1		68070	124486715	NM_001081064.1	Pdzd2	NP_001074533.1	ILMN_2654167	005700113	S	1684	GTGAAGAAGTCTACCCGTTCTCTGAGCACCACCCACGTGGAATCGCCGTG	15	-	12337072-12337121	15qA1	Mus musculus PDZ domain containing 2 (Pdzd2), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence ISA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	Pdzk3; mKIAA0300; A930022H17Rik; Gm82; KIAA0300; 4930537L06Rik	Pdzk3; mKIAA0300; A930022H17Rik; Gm82; KIAA0300; 4930537L06Rik
Mus musculus	RefSeq	ILMN_214860	ILMN_240285	PDZD2	NM_001081064.1	NM_001081064.1		68070	124486715	NM_001081064.1	Pdzd2	NP_001074533.1	ILMN_1256711	006480072	S	1564	GAACTGATGGTACGAAATGGGGACCCCCGGATCAGAATGCTGGAGGTCTC	15	-	12340820-12340869	15qA1	Mus musculus PDZ domain containing 2 (Pdzd2), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence ISA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	Pdzk3; mKIAA0300; A930022H17Rik; Gm82; KIAA0300; 4930537L06Rik	Pdzk3; mKIAA0300; A930022H17Rik; Gm82; KIAA0300; 4930537L06Rik
Mus musculus	RefSeq	ILMN_223332	ILMN_240285	PDZD2	NM_001081064.1	NM_001081064.1		68070	124486715	NM_001081064.1	Pdzd2	NP_001074533.1	ILMN_1231978	006350241	S	10493	GTAAGACAATTCCGTGAAGGCTCATTCCCACCCACCCGCACATACCACAT	15	-	12289679-12289728	15qA1	Mus musculus PDZ domain containing 2 (Pdzd2), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence ISA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	Pdzk3; mKIAA0300; A930022H17Rik; Gm82; KIAA0300; 4930537L06Rik	Pdzk3; mKIAA0300; A930022H17Rik; Gm82; KIAA0300; 4930537L06Rik
Mus musculus	RefSeq	ILMN_196744	ILMN_196744	KLRA9	NM_010651.2	NM_010651.2		16640	31982782	NM_010651.2	Klra9	NP_034781.1	ILMN_1233017	002490239	S	1000	CCTGTTGGAGAGAGGACACATCTACTCGGGTGAATGGGCATGCTTTGTGC	6	-	130144443-130144492	6qF3	Mus musculus killer cell lectin-like receptor subfamily A, member 9 (Klra9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	LY49I1; Ly49I	LY49I1; Ly49I
Mus musculus	MEEBO	ILMN_194820	ILMN_194820	1700045I11RIK	scl073350.1_36						1700045I11Rik		ILMN_2509914	004570167	S	17	TCGCTGCGGCCCCGGGGAAATGGACGTGTTTGCTGGTTCCGCTCCAGGAG										
Mus musculus	RefSeq	ILMN_186385	ILMN_186385	ZMPSTE24	NM_172700.2	NM_172700.2		230709	118129981	NM_172700.2	Zmpste24	NP_766288.1	ILMN_2471634	001850349	S	1365	CCGCCTTTGGTTTTTATGACAGCCAACCCACTCTGATCGGACTCTTGATC	4	-	120738451-120738500	4qD2.2	Mus musculus zinc metallopeptidase, STE24 homolog (S. cerevisiae) (Zmpste24), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of prenylated proteins [goid 30327] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	D030046F19; STE24; MADB; Face-1; Ste24p; FACE1; A530043O15Rik	D030046F19; STE24; MADB; Face-1; Ste24p; FACE1; A530043O15Rik
Mus musculus	RefSeq	ILMN_186385	ILMN_186385	ZMPSTE24	NM_172700.2	NM_172700.2		230709	118129981	NM_172700.2	Zmpste24	NP_766288.1	ILMN_2435079	003130390	S	2306	CACTCTAGTCCTTGCTGGCCCCAAATTCATTCTTTAGCACAAGGTGGCCT	4	-	120732917-120732966	4qD2.2	Mus musculus zinc metallopeptidase, STE24 homolog (S. cerevisiae) (Zmpste24), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of prenylated proteins [goid 30327] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	D030046F19; STE24; MADB; Face-1; Ste24p; FACE1; A530043O15Rik	D030046F19; STE24; MADB; Face-1; Ste24p; FACE1; A530043O15Rik
Mus musculus	RefSeq	ILMN_186385	ILMN_186385	ZMPSTE24	NM_172700.2	NM_172700.2		230709	118129981	NM_172700.2	Zmpste24	NP_766288.1	ILMN_1248079	000730338	S	3040	CCAGTGGGAAAAGGTATGTGCTTGACTGCTTCAAATGTCTGTCCACGTCC	4	-	120732183-120732232	4qD2.2	Mus musculus zinc metallopeptidase, STE24 homolog (S. cerevisiae) (Zmpste24), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of prenylated proteins [goid 30327] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	D030046F19; STE24; MADB; Face-1; Ste24p; FACE1; A530043O15Rik	D030046F19; STE24; MADB; Face-1; Ste24p; FACE1; A530043O15Rik
Mus musculus	RefSeq	ILMN_186385	ILMN_186385	ZMPSTE24	NM_172700.2	NM_172700.2		230709	118129981	NM_172700.2	Zmpste24	NP_766288.1	ILMN_1248615	002850136	S	2439	TAATAGTGCTTGAAATTAGAAACCTTTTAAATCATTGACTTTGGGTTTGC	4	-	120732784-120732833	4qD2.2	Mus musculus zinc metallopeptidase, STE24 homolog (S. cerevisiae) (Zmpste24), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of prenylated proteins [goid 30327] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	D030046F19; STE24; MADB; Face-1; Ste24p; FACE1; A530043O15Rik	D030046F19; STE24; MADB; Face-1; Ste24p; FACE1; A530043O15Rik
Mus musculus	RefSeq	ILMN_222009	ILMN_222009	SLC29A2	NM_007854.2	NM_007854.2		13340	133892139	NM_007854.2	Slc29a2	NP_031880.1	ILMN_2743421	002450021	S	1815	ACAAGCTGGGCAGGGATCATCCCCAGGTGGGATTCGACTGTCTATGGAAG	19	+	5031746-5031795	19qA	Mus musculus solute carrier family 29 (nucleoside transporters), member 2 (Slc29a2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), into, out of, within or between cells [goid 15858] [evidence IDA]	Catalysis of the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other [goid 5337] [evidence IDA]	Der12; HNP36; ENT2	Der12; HNP36; ENT2
Mus musculus	Riken	ILMN_205388	ILMN_205388	D930049D10RIK	ri|D930049D10|PX00203J04|AK053096|3869					AK053096	D930049D10Rik		ILMN_1240347	001300270	S	3714	GGACCTGAGAGAAAGTACAAGATTCAGAGACCCCACTGTTGCACACTCAG										
Mus musculus	MEEBO	ILMN_191386	ILMN_191386	1700003B17RIK	scl13502.1.1_78						1700003B17Rik		ILMN_1245117	007400674	S	2	AGCAACAGTACCTTTCCAGACCTTCCTTTTCCTCCTCGTGCTCACACTTC										
Mus musculus	MEEBO	ILMN_212070	ILMN_212070	RDH12	scl43043.6.50_3	XM_126957.1			20857285	XM_126957.1	Rdh12		ILMN_1246729	000010327	S	915	AGCCTGCACTGTGCTCTGGCGGAGGACCTAGAGCCCCTGAGTGGAAAGTA							A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190849	ILMN_190849	1700087I21RIK	scl076619.1_5						1700087I21Rik		ILMN_2473795	003610672	S	7	ACAAGCAATCCGCTGCTCCGGGTTTTACGAGCAGCACGAGGAAGAGCCTG										
Mus musculus	RefSeq	ILMN_220533	ILMN_227461	CNKSR1	NM_001081047.1	NM_001081047.1		194231	124486673	NM_001081047.1	Cnksr1	NP_001074516.1	ILMN_2723329	006660382	S	2238	AGACATCTCCAAGAACAGACCTTCCACACACTCTGCTCACGTGTCCCCTA	4	-	133784136-133784185	4qD3	Mus musculus connector enhancer of kinase suppressor of Ras 1 (Cnksr1), mRNA.	The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence ISO]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence ISO]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence ISO]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence ISO]	BC037758	BC037758
Mus musculus	RefSeq	ILMN_211281	ILMN_211281	DNAJB4	NM_025926.2	NM_025926.2		67035	142381383	NM_025926.2	Dnajb4	NP_080202.1	ILMN_2691452	000360114	S	1414	ACAAGTAAAAGTTGGTTTTGTGGTCTATGGATATACTTCTAGTAAATACT	3	-	151847831-151847880	3qH3	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 4 (Dnajb4), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	1700029A20Rik; 5730460G06Rik; 2010306G19Rik	1700029A20Rik; 5730460G06Rik; 2010306G19Rik
Mus musculus	RefSeq	ILMN_207467	ILMN_207467	PI4K2B	NM_028744.1	NM_028744.1		67073	13386343	NM_028744.1	Pi4k2b	NP_083020.1	ILMN_3099758	006250538	A	1331	AGATGCCATGTGTGATCGTGGAGTGCAGCAAAAGTGGCAGCCAGGGCCGT	5	+	53158874-53158923	5qC1	Mus musculus phosphatidylinositol 4-kinase type 2 beta (Pi4k2b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 4-phosphate [goid 4430] [evidence IEA]	4933409G22Rik; 2610042N09Rik	4933409G22Rik; 2610042N09Rik
Mus musculus	RefSeq	ILMN_207467	ILMN_207467	PI4K2B	NM_028744.1	NM_028744.1		67073	13386343	NM_028744.1	Pi4k2b	NP_083020.1	ILMN_3026851	005490411	I	374	GTCCGTTTTACTCTAGGAGTCTGTGTTACAAAACAACTACTGCTTTGGGG	5	+	53134743-53134792	5qC1	Mus musculus phosphatidylinositol 4-kinase type 2 beta (Pi4k2b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 4-phosphate [goid 4430] [evidence IEA]	4933409G22Rik; 2610042N09Rik	4933409G22Rik; 2610042N09Rik
Mus musculus	RefSeq	ILMN_199965	ILMN_199965	LOC381597	XM_355555.1	XM_355555.1			38079268	XM_355555.1	LOC381597		ILMN_2537112	007550722	S	2013	CTGTATAACCTCTAGCCCTAGAGTGAGGGGATGTGTGACTGATAAGTGAC										
Mus musculus	RefSeq	ILMN_218613	ILMN_218613	PRL2A1	NM_019991.1	NM_019991.1		56635	9910513	NM_019991.1	Prl2a1	NP_064375.1	ILMN_1227631	003990209	S	612	GACTGAAGATATTCGCCTCTTTGCATATTATAACATGATCCGCTGTGAGG	13	+	27900327-27900376	13qA3.1	Mus musculus prolactin family 2, subfamily a, member 1 (Prl2a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PLP-M; Prlpm	PLP-M; Prlpm
Mus musculus	MEEBO	ILMN_193702	ILMN_193702	VTI1A	scl070938.1_239	NM_183291.1			34304100	NM_183291.1	Vti1a		ILMN_1230038	004050091	S	20	TAAAGATGCTATTATCCCTGTCCTTACACTTAGTGTAATGTGAGACCCAC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]			
Mus musculus	RefSeq	ILMN_222780	ILMN_222780	PPNR	NM_012022.1	NM_012022.1		26930	6755145	NM_012022.1	Ppnr	NP_036152.1	ILMN_2822477	002230202	S	2783	GCCTAGGGCACATAACAAGTCTCAGAGGCCAACCTGAGCTACAAAGCAAG	19	+	55901924-55901973	19qD2	Mus musculus per-pentamer repeat gene (Ppnr), mRNA.				mp41	mp41
Mus musculus	RefSeq	ILMN_210070	ILMN_210070	KAT5	NM_178637.1	NM_178637.1		81601	30519990	NM_178637.1	Kat5	NP_848752.1	ILMN_1232000	005700768	S	304	AGCGGGAAGACCTTGCCAATCCCGGTCCAGATCACACTCCGCTTCAACCT	19	-	5608889-5608938	19qA	Mus musculus K(lysine) acetyltransferase 5 (Kat5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]	Tip60; Htatip1; Tip55; 60kDa; PLIP; MGC117972; AI839539	Tip60; Htatip1; Tip55; 60kDa; PLIP; MGC117972; AI839539
Mus musculus	RefSeq	ILMN_210070	ILMN_210070	KAT5	NM_178637.1	NM_178637.1		81601	30519990	NM_178637.1	Kat5	NP_848752.1	ILMN_2839973	004850546	S	1186	GAAGGGAAGACCGGAACTCCTGAGAAACCCCTGTCAGATCTTGGCCTCCT	19	-	5603919-5603968	19qA	Mus musculus K(lysine) acetyltransferase 5 (Kat5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]	Tip60; Htatip1; Tip55; 60kDa; PLIP; MGC117972; AI839539	Tip60; Htatip1; Tip55; 60kDa; PLIP; MGC117972; AI839539
Mus musculus	RefSeq	ILMN_210959	ILMN_210959	PMM1	NM_013872.1	NM_013872.1		29858	33468958	NM_013872.1	Pmm1	NP_038900.1	ILMN_2974041	002810192	S	878	CTTCAAAGAGCTCTGACCAGGCCTGAAGATAGAACCATTGGGTGCCACGG	15	-	81778669-81778718	15qE1	Mus musculus phosphomannomutase 1 (Pmm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose [goid 19307] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-mannose 1-phosphate = D-mannose 6-phosphate [goid 4615] [evidence IEA]	C77612	C77612
Mus musculus	Riken	ILMN_206116	ILMN_206116	TRIM24	ri|B430201A09|PX00071K23|AK080890|3050					AK080890	Trim24		ILMN_1238199	005360309	S	2346	CAGAGAAATGAACCCAGGTCCCCTACAAGAGCAGCAACTGCTACAGCCTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively, in a ligand dependent manner, with a nuclear receptor protein [goid 16922] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211496	ILMN_211496	LETM1	NM_019694.1	NM_019694.1		56384	9789996	NM_019694.1	Letm1	NP_062668.1	ILMN_2663735	000510452	S	3316	GGGCTTCACAAGGGAATCTCTGTATGTTGTAGGCTCAAGGCTCCAGCTTC	5	-	34084115-34084164	5qB2	Mus musculus leucine zipper-EF-hand containing transmembrane protein 1 (Letm1), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211496	ILMN_211496	LETM1	NM_019694.1	NM_019694.1		56384	9789996	NM_019694.1	Letm1	NP_062668.1	ILMN_2921967	002070632	S	3384	GGCTGTGCTCCAGCCACCAAGAAGTGAGGAAGTTGTACTGTGATGCCACA	5	-	34084047-34084096	5qB2	Mus musculus leucine zipper-EF-hand containing transmembrane protein 1 (Letm1), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211496	ILMN_211496	LETM1	NM_019694.1	NM_019694.1		56384	9789996	NM_019694.1	Letm1	NP_062668.1	ILMN_1248887	002850390	S	3280	ATTCAAGTCCTAACCCACAGGGCAATGTGCAAGATGGGGCTTCACAAGGG	5	-	34084151-34084200	5qB2	Mus musculus leucine zipper-EF-hand containing transmembrane protein 1 (Letm1), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211496	ILMN_211496	LETM1	NM_019694.1	NM_019694.1		56384	9789996	NM_019694.1	Letm1	NP_062668.1	ILMN_2755152	006620152	S	2003	GATCGATGGCCTGATCACACAGCTGGAGACCACTCAACAGGATGGCAAGC	5	-	34087692-34087741	5qB2	Mus musculus leucine zipper-EF-hand containing transmembrane protein 1 (Letm1), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211974	ILMN_211974	KEAP1	NM_016679.2	NM_016679.2		50868	31543042	NM_016679.2	Keap1	NP_057888.1	ILMN_2993267	000610397	S	3565	GGAGAGACAGCTCTTCTATTGAAATACACGCAGATCCTGATGGGGCTGGT				9qA3	Mus musculus kelch-like ECH-associated protein 1 (Keap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IPI]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that modulates the frequency, rate or extent of epidermal cell differentiation [goid 45604] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]	INRF2; mKIAA0132	INRF2; mKIAA0132
Mus musculus	RefSeq	ILMN_212183	ILMN_212183	TERF2	NM_009353.2	NM_009353.2		21750	133904141	NM_009353.2	Terf2	NP_033379.2	ILMN_2623712	001190280	S	1646	TTGGCATGAACTGAGAAAGGGTTTCGTAGCCACAGGACTCACAAGAACAC	8	-	109594270-109594306:109594307-109594319	8qD3	Mus musculus telomeric repeat binding factor 2 (Terf2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32206] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32206] [evidence IMP]; A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse [goid 31848] [evidence IMP]; A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse [goid 31848] [evidence IDA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TRF2	TRF2
Mus musculus	RefSeq	ILMN_215353	ILMN_215353	STRA13	NM_016665.2	NM_016665.2		20892	145208005	NM_016665.2	Stra13	NP_057874.2	ILMN_1237761	003170438	S	434	CCTCCAGACACAGCCCTCCTCCCGCCCCCAGCAGCCTTGCATTATAAATA				11qE2	Mus musculus stimulated by retinoic acid 13 (Stra13), mRNA.					
Mus musculus	RefSeq	ILMN_215822	ILMN_215822	FHL5	NM_021318.3	NM_021318.3		57756	141802829	NM_021318.3	Fhl5	NP_067293.1	ILMN_2663977	003610291	S	1037	AAAGAGACAAGTCTTTCACCATCTGAAATCTGCTTTGCCCTTGCTCTCAC	4	-	25127074-25127123	4qA3	Mus musculus four and a half LIM domains 5 (Fhl5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of RNA on a template of DNA [goid 6351] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]	Act; 1700027G07Rik	Act; 1700027G07Rik
Mus musculus	RefSeq	ILMN_237672	ILMN_237672	OTTMUSG00000000494	NM_001045544.1	NM_001045544.1		632793	113865926	NM_001045544.1	OTTMUSG00000000494	NP_001039009.1	ILMN_2816461	003800376	S	637	CACAAGCGTGTCCTCTACCTCCACAGCTCCAGGTCTGCAAACAATGCCAG	13	+	22648706-22648755	13qA3.1	Mus musculus predicted gene, OTTMUSG00000000494 (OTTMUSG00000000494), mRNA.					
Mus musculus	MEEBO	ILMN_193773	ILMN_193773	SCL0002694.1_23	scl0002694.1_23						scl0002694.1_23		ILMN_2500297	006220408	S	19	CAGGACTCTACCCAAAGAATGGGTTTGTATTTAAGGGCCCCAGCAGTTAG										
Mus musculus	RefSeq	ILMN_213742	ILMN_213742	MRPL21	NM_172252.3	NM_172252.3		353242	142385334	NM_172252.3	Mrpl21	NP_758456.2	ILMN_2640313	005720066	S	623	GCATGCCAAAGAGAGCAATTCTCAGAAGTCGGGCCTACTTTGCACCTCGT	19	+	3292468-3292517	19qA	Mus musculus mitochondrial ribosomal protein L21 (Mrpl21), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	BC028768; MGC41352	BC028768; MGC41352
Mus musculus	RefSeq	ILMN_239280	ILMN_239280	PLA2G4B	NM_145378.2	NM_145378.2		211429	124249336	NM_145378.2	Pla2g4b	NP_663353.2	ILMN_3008371	006900551	S	2244	ACGGCTGACGCATTACAACATCTGCAACAACCAGGATCGGCTGCGGGAGG	2	+	119867246-119867295	2qE5	Mus musculus phospholipase A2, group IVB (cytosolic) (Pla2g4b), mRNA. XM_900391 XM_900400 XM_900408 XM_900416 XM_900430 XM_917664 XM_925074 XM_925078 XM_925084 XM_925088 XM_925090 XM_925092 XM_925095 XM_983757 XM_983791 XM_983829 XM_983873 XM_983913 XM_984017	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a glycerophospholipid [goid 4620] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]	A030011C02Rik; Gm1013; MGC28892	A030011C02Rik; Gm1013; MGC28892
Mus musculus	RefSeq	ILMN_199120	ILMN_318985	5730522E02RIK	XR_035404.1	XR_035404.1		70626	149261685	XR_035404.1	5730522E02Rik		ILMN_1252073	000050672	S	391	AGAGGCTCCGTTAGTGATATGGGCTGCAGAAAACCCTGCCAGAAGACAGG	11	-	25552022-25552068:25668982-25668984	11qA3.2-qA3.3	PREDICTED: Mus musculus RIKEN cDNA 5730522E02 gene (5730522E02Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_218563	ILMN_318985	5730522E02RIK	XR_035404.1	XR_035404.1		70626	149261685	XR_035404.1	5730522E02Rik		ILMN_2697334	004250475	S	310	GGAACCAAATTTCACATCCAAAAACAACAAACTTCTCAACCAAGAGTATC	11	-	25669016-25669065	11qA3.2-qA3.3	PREDICTED: Mus musculus RIKEN cDNA 5730522E02 gene (5730522E02Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_214146	ILMN_260888	2700050L05RIK	NM_145995.1	NM_145995.1		214764	22122450	NM_145995.1	2700050L05Rik	NP_666107.1	ILMN_2672606	000160433	S	2391	GCGCATCAGCGTCTACTTCTAAGTGACACAAAAGTGTCCCCTTTCCAAGC	7	+	140863621-140863670	7qF3	Mus musculus RIKEN cDNA 2700050L05 gene (2700050L05Rik), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MGC27934; MGC58090; AU022667; AW558805	MGC27934; MGC58090; AU022667; AW558805
Mus musculus	MEEBO	ILMN_220103	ILMN_220103	PIM3	scl47630.6_103	NM_145478.1			21703943	NM_145478.1	Pim3		ILMN_2717667	000290161	S	2189	GCTGGGGAGGGGTTTAAATTATTGACCTTGTACAGTCTGCTTGCTGGCTC							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188868	ILMN_256707	DGKG	NM_138650.1	NM_138650.1		110197	20149723	NM_138650.1	Dgkg	NP_619591.1	ILMN_1237518	002900017	S	2958	CCGTTTCCATTCTTGGTTCCCTCTGCTGTCCATGGGTACTTGTTCGCTTC	16	-	22468712-22468761	16qB1	Mus musculus diacylglycerol kinase, gamma (Dgkg), mRNA.		The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]	E430001K23Rik; 90kDa; mKIAA4131; AI854428; Dagk3; KIAA4131; 2900055E17Rik	E430001K23Rik; 90kDa; mKIAA4131; AI854428; Dagk3; KIAA4131; 2900055E17Rik
Mus musculus	RefSeq	ILMN_185836	ILMN_261989	GPI1	NM_008155.2	NM_008155.2		14751	142381221	NM_008155.2	Gpi1	NP_032181.1	ILMN_2692845	006370100	S	1883	CGCACCCTCCCTGTTGAAGCTGATGGAAGGGCTTTGACGTGTCATGTTGT	7	-	34987226-34987275	7qB1	Mus musculus glucose phosphate isomerase 1 (Gpi1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IC ]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: D-glucose 6-phosphate = D-fructose 6-phosphate [goid 4347] [evidence IDA]; Catalysis of the reaction: D-glucose 6-phosphate = D-fructose 6-phosphate [goid 4347] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Org; MGC113776; Gpi-1; Gpi1-s; Gpi-1s; Gpi1s; Gpi-1r; Amf; Gpi1-r; Gpi-1t; Gpi1-t	Org; MGC113776; Gpi-1; Gpi1-s; Gpi-1s; Gpi1s; Gpi-1r; Amf; Gpi1-r; Gpi-1t; Gpi1-t
Mus musculus	RefSeq	ILMN_185962	ILMN_185962	YIF1A	NM_026553.3	NM_026553.3		68090	141802995	NM_026553.3	Yif1a	NP_080829.1	ILMN_1223547	007040719	S	692	TGGTGTGGGTGTTCATGGAGGTGTTGGCTCTGCTTCTGGGCCTCTACCTG	19	+	5091582-5091631	19qA	Mus musculus Yip1 interacting factor homolog A (S. cerevisiae) (Yif1a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		5330422J23Rik; Yif1p; 54TM; Yif1	5330422J23Rik; Yif1p; 54TM; Yif1
Mus musculus	RefSeq	ILMN_185962	ILMN_185962	YIF1A	NM_026553.3	NM_026553.3		68090	141802995	NM_026553.3	Yif1a	NP_080829.1	ILMN_1235000	005820403	S	833	TGCTCTTCGGCAGTGATGGCTACTACGTGGCCCTGGCCTGGACATCATCT	19	+	5092155-5092204	19qA	Mus musculus Yip1 interacting factor homolog A (S. cerevisiae) (Yif1a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		5330422J23Rik; Yif1p; 54TM; Yif1	5330422J23Rik; Yif1p; 54TM; Yif1
Mus musculus	RefSeq	ILMN_213125	ILMN_231857	FUT11	NM_028428.2	NM_028428.2		73068	118130486	NM_028428.2	Fut11	NP_082704.1	ILMN_1219538	005960605	S	2973	CATGCATGTTAGATGCTTTAAGCAACCAGGCTTCATGGTTAATACTGTGA	14	+	21519048-21519097	14qA3	Mus musculus fucosyltransferase 11 (Fut11), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IEA]	3110009G03Rik; AI317183	3110009G03Rik; AI317183
Mus musculus	Riken	ILMN_203354	ILMN_203354	KIT	ri|B830009P17|PX00072M12|AK046795|3883					AK046795	Kit		ILMN_1250169	001260706	S	3446	GTAGCAAGACTAGAAAAGGAAAGCCAAGCCCTTTGTGTAGAAAGCAGACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence TAS]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IGI]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IMP]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with stem cell factor, a cytokine that stimulates mast cell growth and differentiation, to initiate a change in cell activity [goid 5020] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196653	ILMN_233744	CYP2J11	NM_001004141.1	NM_001004141.1		100066	51921286	NM_001004141.1	Cyp2j11	NP_001004141.1	ILMN_1258039	003420050	S	1643	GGAGTATGCCCTGAAGATTCTTGGCCTTGCTCACATAAAAGGAGAAAGGC	4	-	95961405-95961454	4qC5	Mus musculus cytochrome P450, family 2, subfamily j, polypeptide 11 (Cyp2j11), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC91118; AI314783	MGC91118; AI314783
Mus musculus	RefSeq	ILMN_189873	ILMN_233744	CYP2J11	NM_001004141.1	NM_001004141.1		100066	51921286	NM_001004141.1	Cyp2j11	NP_001004141.1	ILMN_2465162	006100100	S	1782	GCCAAATTTAGGCACCAGGAATCCAGATATTTGATTCAATTTCTTAGCCT	4	-	95961266-95961315	4qC5	Mus musculus cytochrome P450, family 2, subfamily j, polypeptide 11 (Cyp2j11), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC91118; AI314783	MGC91118; AI314783
Mus musculus	RefSeq	ILMN_233744	ILMN_233744	CYP2J11	NM_001004141.1	NM_001004141.1		100066	51921286	NM_001004141.1	Cyp2j11	NP_001004141.1	ILMN_2800986	002810674	S	1574	CTACCGGATCTGTGCGGTCCCTAGATTGTGATGCTGGAGCAAAAAGGAAG	4	-	95961474-95961505:95961506-95961523	4qC5	Mus musculus cytochrome P450, family 2, subfamily j, polypeptide 11 (Cyp2j11), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC91118; AI314783	MGC91118; AI314783
Mus musculus	Riken	ILMN_203291	ILMN_203291	HARSL	ri|4631412B19|PX00011J05|AK014515|2002					AK014515	Harsl		ILMN_1256363	004920554	S	1087	CTGAGGTTATTTGGAATTGCTGATAAGATGTCTGGTGAGAAGGTTCGCAC										
Mus musculus	Riken	ILMN_206963	ILMN_206963	E130001K05RIK	ri|E130001K05|PX00207O23|AK087374|960					AK087374	E130001K05Rik		ILMN_1231662	001850390	S	330	AAAGGAGAGGAACCAAAGGAAGGCAGGGTGTTCCCCATAATGCCAGGATG										
Mus musculus	Riken	ILMN_205481	ILMN_205481	D030041I21RIK	ri|D030041I21|PX00180D06|AK050942|2535					AK050942	D030041I21Rik		ILMN_2572887	001690735	S	2102	CAGCCCTTCAAGGGATAGTAAATGGACAACTCCAACACAAAGAGGGAAAC										
Mus musculus	MEEBO	ILMN_189264	ILMN_189264	3222401L13RIK	scl52050.1.7_128						3222401L13Rik		ILMN_1215295	004810270	S	6	TACTGTAACCTGAGATGCTGTCATTTTTAAACCTTCTTTATCAAGGAATA										
Mus musculus	RefSeq	ILMN_196775	ILMN_196775	TAPBPL	NM_145391.1	NM_145391.1		213233	21703781	NM_145391.1	Tapbpl	NP_663366.1	ILMN_2974611	006480131	S	1741	GGCCCTGGACTGTACAAGTCTCTGCTTTCTGTGCTATTGAGAAGAGAGCC	6	-	125174512-125174561	6qF3	Mus musculus TAP binding protein-like (Tapbpl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]		BC017613; TAPBPL-R; MGC27679	BC017613; TAPBPL-R; MGC27679
Mus musculus	RefSeq	ILMN_196775	ILMN_196775	TAPBPL	NM_145391.1	NM_145391.1		213233	21703781	NM_145391.1	Tapbpl	NP_663366.1	ILMN_2606502	003990097	S	370	CACGGACATCATCTTAGACTGCTTCTTGGTGACAGAAGACAGGCACCGCG	6	-	125180723-125180772	6qF3	Mus musculus TAP binding protein-like (Tapbpl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]		BC017613; TAPBPL-R; MGC27679	BC017613; TAPBPL-R; MGC27679
Mus musculus	RefSeq	ILMN_196775	ILMN_196775	TAPBPL	NM_145391.1	NM_145391.1		213233	21703781	NM_145391.1	Tapbpl	NP_663366.1	ILMN_2606498	000290402	S	374	GGACATCATCTTAGACTGCTTCTTGGTGACAGAAGACAGGCACCGCGGGG	6	-	125180719-125180768	6qF3	Mus musculus TAP binding protein-like (Tapbpl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]		BC017613; TAPBPL-R; MGC27679	BC017613; TAPBPL-R; MGC27679
Mus musculus	RefSeq	ILMN_197063	ILMN_253976	HHIPL1	NM_001044380.1	NM_001044380.1		214305	124249063	NM_001044380.1	Hhipl1	NP_001037845.1	ILMN_1246497	004050066	S	2455	CACAATTGCAAGCACGACGAGGACGCTGGCGTCGAGTGCAGCCACCAAGA	12	+	109566360-109566409	12qF1	Mus musculus hedgehog interacting protein-like 1 (Hhipl1), mRNA. XM_990098	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	AK129450; KIAA1822; mKIAA1822	AK129450; KIAA1822; mKIAA1822
Mus musculus	RefSeq	ILMN_253976	ILMN_253976	HHIPL1	NM_001044380.1	NM_001044380.1		214305	124249063	NM_001044380.1	Hhipl1	NP_001037845.1	ILMN_2963511	001510370	S	1956	CTTTGTGCCCAAGGAAAAGTTCATCCGGACGCCAGAGAGCACTCCGCGCC	12	+	109565402-109565418:109565878-109565910	12qF1	Mus musculus hedgehog interacting protein-like 1 (Hhipl1), mRNA. XM_990098	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	AK129450; KIAA1822; mKIAA1822	AK129450; KIAA1822; mKIAA1822
Mus musculus	MEEBO	ILMN_218260	ILMN_218260	4921528H16RIK	scl30229.21.1_176	XM_133060.2			28523332	XM_133060.2	4921528H16Rik		ILMN_1238778	001710170	S	2850	TCTAACTACGATTGTATGGTTCAGAGTTCCAGGACTATGATGATTCACCC										
Mus musculus	MEEBO	ILMN_184454	ILMN_184454	D030038I21RIK	scl50929.21_433				52138545	NM_001004366	D030038I21Rik		ILMN_2418760	006130204	S	3	CCTTGTGTCTCTCTGTGGATTCATGGTAACAGAAGCAGATGGACTTGGTC										
Mus musculus	Riken	ILMN_206696	ILMN_206696	C130071M06RIK	ri|C130071M06|PX00171I24|AK081721|695					AK081721	C130071M06Rik		ILMN_1252022	000020259	S	156	GGGAGAGTCCAACACCCCACTCTCATCAACGCACAGATCATGAAAACGGA										
Mus musculus	RefSeq	ILMN_212780	ILMN_212780	TRIM52	NM_198601.3	NM_198601.3		212085	148352319	NM_198601.3	Trim52	NP_941003.1	ILMN_1255667	006270707	S	2812	GTGTTTCACCTTGTCCAGTTTTTACTGAATAGGTGCAAAAAGACTGGATA				14qE2.3	Mus musculus tripartite motif-containing 52 (Trim52), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4921513B05Rik	4921513B05Rik
Mus musculus	MEEBO	ILMN_192169	ILMN_192169	SCL0003020.1_1	scl0003020.1_1	AK029171.1			26081188	AK029171.1	scl0003020.1_1		ILMN_1255314	000870070	S	1	TAATCTGCAGAATGGCGGCCATGCTGACCATGCACAGTTGAACGCCTGCT										
Mus musculus	RefSeq	ILMN_197680	ILMN_259776	LOC669602	XR_002588.1	XR_002588.1		669602	94371321	XR_002588.1	LOC669602		ILMN_1226189	002190369	S	1305	GACACCCACAAGCATCCCAGCCCTAACAGGTACACCCCTCACACAGGATC					PREDICTED: Mus musculus similar to DiGeorge syndrome critical region gene 14 (predicted) (LOC669602), mRNA.					
Mus musculus	MEEBO	ILMN_184427	ILMN_184427	IGHV5S18_AF290972_IG_HEAVY_VARIABLE_5S18_125	IGHV5S18_AF290972_Ig_heavy_variable_5S18_125						IGHV5S18_AF290972_Ig_heavy_variable_5S18_125		ILMN_2418537	003610576	S	14	CAGGCTCCAGAGAAGGGGCTGGAGTGGGTCGCATACATTAGTAGTGGCAG										
Mus musculus	RefSeq	ILMN_212566	ILMN_212566	DERL1	NM_024207.2	NM_024207.2		67819	31541802	NM_024207.2	Derl1	NP_077169.1	ILMN_2732768	004260332	S	2908	GGTGGTGTGTTATATGATGGAATCTATGTCACTGCCTTCACCGGGTCGGT	15	-	57699772-57699821	15qD1	Mus musculus Der1-like domain family, member 1 (Derl1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		AW551338; Derlin-1; AI195141; 1110021N07Rik	AW551338; Derlin-1; AI195141; 1110021N07Rik
Mus musculus	RefSeq	ILMN_212566	ILMN_212566	DERL1	NM_024207.2	NM_024207.2		67819	31541802	NM_024207.2	Derl1	NP_077169.1	ILMN_2896416	003460309	S	2977	GTTTATGACTAGCAGGACAGCAAGCCTTTTTGTATGTGATTGGTGCTCAC	15	-	57699703-57699752	15qD1	Mus musculus Der1-like domain family, member 1 (Derl1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		AW551338; Derlin-1; AI195141; 1110021N07Rik	AW551338; Derlin-1; AI195141; 1110021N07Rik
Mus musculus	RefSeq	ILMN_209634	ILMN_209634	OLFR1443	NM_146698.2	NM_146698.2		258693	41056105	NM_146698.2	Olfr1443	NP_666909.1	ILMN_2891065	003120368	S	4229	ATGGAGAAGGAGTGGGGAAAGATTGTGGGAGGTGTGACGAGGAGAGGGGC	19	+	12758227-12758276	19qA	Mus musculus olfactory receptor 1443 (Olfr1443), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR202-8	MOR202-8
Mus musculus	RefSeq	ILMN_209634	ILMN_209634	OLFR1443	NM_146698.2	NM_146698.2		258693	41056105	NM_146698.2	Olfr1443	NP_666909.1	ILMN_2690703	003830192	S	3794	ATTAACAATATATCAGAGCATTCCTGATACTCAGTACTAGCTACCCAACA	19	+	12757792-12757841	19qA	Mus musculus olfactory receptor 1443 (Olfr1443), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR202-8	MOR202-8
Mus musculus	RefSeq	ILMN_209634	ILMN_209634	OLFR1443	NM_146698.2	NM_146698.2		258693	41056105	NM_146698.2	Olfr1443	NP_666909.1	ILMN_2597700	001030328	S	698	TACTTCATCAACATGACTGGAAACTTGGGGATGCTTGTGCTGATTCTCTG	19	+	12754696-12754745	19qA	Mus musculus olfactory receptor 1443 (Olfr1443), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR202-8	MOR202-8
Mus musculus	RefSeq	ILMN_209634	ILMN_209634	OLFR1443	NM_146698.2	NM_146698.2		258693	41056105	NM_146698.2	Olfr1443	NP_666909.1	ILMN_1230566	003890632	S	2826	GCAGATGAACACCCTCATATGCACTGCTTTGAACATGCCCTGGGACATTC	19	+	12756824-12756873	19qA	Mus musculus olfactory receptor 1443 (Olfr1443), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR202-8	MOR202-8
Mus musculus	MEEBO	ILMN_193245	ILMN_193245	4632427E13RIK	scl0068186.1_10						4632427E13Rik		ILMN_1249374	003170408	S	12	CCCCTCTTAGAAACTAAAGGCCAGTCCTAACTCAGTGCACAGTGATCATG										
Mus musculus	Riken	ILMN_204563	ILMN_204563	B930011A14RIK	ri|B930011A14|PX00162O19|AK047011|2007					AK047011	B930011A14Rik		ILMN_2565942	002120672	S	1924	GAAGAGTGATTTTCAAAGCCTGCCTGGCTGAGCTGGACTTGCCTTCATCC										
Mus musculus	RefSeq	ILMN_218575	ILMN_218575	CST7	NM_009977.2	NM_009977.2		13011	133892388	NM_009977.2	Cst7	NP_034107.1	ILMN_1244891	003310189	S	645	ACATGCCAGTGGGTCATCAGGGGGCTGGACTGGGAGAATATAGTGCCCTC	2	+	150404358-150404407	2qG3	Mus musculus cystatin F (leukocystatin) (Cst7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	MGC151426; MGC151424; CMAP	MGC151426; MGC151424; CMAP
Mus musculus	RefSeq	ILMN_218711	ILMN_218711	CLNK	NM_013748.3	NM_013748.3		27278	148540055	NM_013748.3	Clnk	NP_038776.3	ILMN_2699273	007100594	S	1429	CACTTCATGAGTAAGAAGCCCAGCCAGATATCCCCGCATCAGTGGCCTGG				5qB3	Mus musculus cytokine-dependent hematopoietic cell linker (Clnk), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC159342; MIST	MGC159342; MIST
Mus musculus	RefSeq	ILMN_223236	ILMN_227033	CAD	NM_023525.1	NM_023525.1		69719	51093866	NM_023525.1	Cad	NP_076014.1	ILMN_2761247	002760608	S	6654	CATCATGACCCGGGCCAAGAAGAAGATGGTGGTGATGCACCCAATGCCCC	5	+	31380291-31380340	5qB1	Mus musculus carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase (Cad), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: carbamoyl phosphate + L-aspartate = phosphate + N-carbamoyl-L-aspartate [goid 4070] [evidence IEA]	Cpad; 2410008J01Rik; AU018859	Cpad; 2410008J01Rik; AU018859
Mus musculus	RefSeq	ILMN_200536	ILMN_200536	LOC383306	XM_356976.1	XM_356976.1			38083419	XM_356976.1	LOC383306		ILMN_1235357	007400577	S	313	GCAGCCGCAAAGGGGTGTGGCTTGATTCCTTCAATAGCCCAAGAGGCTCC										
Mus musculus	RefSeq	ILMN_196437	ILMN_232418	1300010F03RIK	XM_001002205.2	XM_001002205.2		219189	149265813	XM_001002205.2	1300010F03Rik	XP_001002205.2	ILMN_2646511	005810392	S	3254	GTTGGCCAGACGGGAAATGGAATGCAGAAGGTCTTGTGTCCAGCTGAAAC	14	+	79480960-79481009	14qD3	PREDICTED: Mus musculus RIKEN cDNA 1300010F03 gene (1300010F03Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217853	ILMN_232418	1300010F03RIK	XM_001002205.2	XM_001002205.2		219189	149265813	XM_001002205.2	1300010F03Rik	XP_001002205.2	ILMN_2688415	004670397	S	6699	TGCTGAGGCCCCATTATGTGCGTGTTTACCTAGTGTAAGCTGGAAAACTC	14	+	79601894-79601943	14qD3	PREDICTED: Mus musculus RIKEN cDNA 1300010F03 gene (1300010F03Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217853	ILMN_232418	1300010F03RIK	XM_001002205.2	XM_001002205.2		219189	149265813	XM_001002205.2	1300010F03Rik	XP_001002205.2	ILMN_1249480	003060286	S	6522	GACAAATTACCCAAAATCCAAAACACTGCGTTTGACTGGGTGTCGCCTGG	14	+	79601717-79601766	14qD3	PREDICTED: Mus musculus RIKEN cDNA 1300010F03 gene (1300010F03Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219625	ILMN_219625	OLFR130	NM_146487.1	NM_146487.1		258480	33238949	NM_146487.1	Olfr130	NP_666698.1	ILMN_2711432	001690240	S	719	GTGGGTCGCACATGCTGGTAGTAGTACTATTTTATGGCACAATCACTGCT	17	+	38204836-38204885	17qB1	Mus musculus olfactory receptor 130 (Olfr130), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-19	MOR256-19
Mus musculus	RefSeq	ILMN_215241	ILMN_215241	SURF1	NM_013677.1	NM_013677.1		20930	7363454	NM_013677.1	Surf1	NP_038705.1	ILMN_2657141	003060440	S	283	CTGAAACTTATTGCAGAATTAGAGTCTCGAGTCATGGCTGAGCCCATCCC	2	-	26770963-26771012	2qA3	Mus musculus surfeit gene 1 (Surf1), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IMP]	Surf-1; 0610010F23Rik	Surf-1; 0610010F23Rik
Mus musculus	RefSeq	ILMN_215241	ILMN_215241	SURF1	NM_013677.1	NM_013677.1		20930	7363454	NM_013677.1	Surf1	NP_038705.1	ILMN_2883561	005490577	S	447	TGTCCGAGAGGCGCGAGATGCTGGCAGACTATCCTCAACTGAAAGTGGGG	2	-	26770263-26770312	2qA3	Mus musculus surfeit gene 1 (Surf1), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IMP]	Surf-1; 0610010F23Rik	Surf-1; 0610010F23Rik
Mus musculus	MEEBO	ILMN_220881	ILMN_220881	NODAL	scl38872.3.1_118				24475947	NM_013611	Nodal		ILMN_2776165	006400273	S	1881	GTGACATACTGGCCTTGGTCAGGGGCTCTCTGATCTCTAATGACTTGCCT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence ISA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IGI]; The process that prevents cells of the epiblast from differentiating into neuroepithelial cells before the appropriate time [goid 2085] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IDA]; The morphogenesis of trophectoderm cells [goid 1831] [evidence IMP]; A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IGI]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IDA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IGI]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189049	ILMN_226398	RBMS1	NM_020296.1	NM_020296.1		56878	9937971	NM_020296.1	Rbms1	NP_064692.1	ILMN_1254966	000540603	S	998	TGATCACTCAAACTTCTCTTACACCCTATATTGCATCTCCTGTATCTGCC	2	-	60596910-60596911:60600110-60600157	2qC1.2	Mus musculus RNA binding motif, single stranded interacting protein 1 (Rbms1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MSSP-1; 2600014B10Rik; YC1; MSSP-3; AI255215; MSSP-2	MSSP-1; 2600014B10Rik; YC1; MSSP-3; AI255215; MSSP-2
Mus musculus	RefSeq	ILMN_226398	ILMN_226398	RBMS1	NM_020296.1	NM_020296.1		56878	9937971	NM_020296.1	Rbms1	NP_064692.1	ILMN_2883990	000010500	S	1187	GTCATCTGTCACTGGGCAGCACCGGAACATACATGCCTGCAACATCAGCC	2	-	60593525-60593553:60594493-60594513	2qC1.2	Mus musculus RNA binding motif, single stranded interacting protein 1 (Rbms1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MSSP-1; 2600014B10Rik; YC1; MSSP-3; AI255215; MSSP-2	MSSP-1; 2600014B10Rik; YC1; MSSP-3; AI255215; MSSP-2
Mus musculus	Riken	ILMN_203615	ILMN_203615	A930029O05RIK	ri|A930029O05|PX00067C12|AK044652|2916					AK044652	A930029O05Rik		ILMN_2558657	006860520	S	2664	AATCCAGCTAGTACAAGGCCTCAGAGGGAAAGGCACACCTCCAAGTATCC										
Mus musculus	RefSeq	ILMN_216272	ILMN_216272	0610037D15RIK	NM_026714.2	NM_026714.2		68394	134053899	NM_026714.2	0610037D15Rik	NP_080990.2	ILMN_1234456	005270753	S	813	GGACAGGGTTCATACCTTGGAGGTTTCCAGTACAGAGGCCCATGATGCCC	4	+	116385357-116385406	4qD1	Mus musculus RIKEN cDNA 0610037D15 gene (0610037D15Rik), mRNA.				4933430J04Rik	4933430J04Rik
Mus musculus	RefSeq	ILMN_187155	ILMN_187155	TOMM34	NM_025996.1	NM_025996.1		67145	13385499	NM_025996.1	Tomm34	NP_080272.1	ILMN_2790144	001940327	S	1877	AAGTGCTTGCTCGTCCGCAGCCACAGCGGCCTGTTGAGCTGGTTCTCCAA	2	-	163745356-163745405	2qH3	Mus musculus translocase of outer mitochondrial membrane 34 (Tomm34), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Tomm34b; Tomm34a; 2610100K07Rik; TOM34	Tomm34b; Tomm34a; 2610100K07Rik; TOM34
Mus musculus	RefSeq	ILMN_214236	ILMN_214236	CYP2A12	NM_133657.1	NM_133657.1		13085	19526797	NM_133657.1	Cyp2a12	NP_598418.1	ILMN_2645815	006960037	S	1309	CACTGGGAAGCGATTCTGCTTGGGAGACAGCCTGGCTAAGATGGAGCTGT	7	+	27820467-27820471:27821484-27821528	7qA3	Mus musculus cytochrome P450, family 2, subfamily a, polypeptide 12 (Cyp2a12), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209261	ILMN_209261	RNF125	NM_026301.1	NM_026301.1		67664	28076894	NM_026301.1	Rnf125	NP_080577.1	ILMN_2917338	002320176	S	1204	ACTGCAACAACTTCTGCGTTTGAAGTGTATTCTTAGCCAGGCATGGAGGA	18	+	21126728-21126777	18qA2	Mus musculus ring finger protein 125 (Rnf125), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4930553F04Rik	4930553F04Rik
Mus musculus	RefSeq	ILMN_185320	ILMN_185320	XPO4	NM_020506.1	NM_020506.1		57258	10048437	NM_020506.1	Xpo4	NP_065252.1	ILMN_1231751	006420541	S	2715	AGAGCAGTACCAAGACCTGCTTCTCATCATGGAGCTTCTCACTAACCTTC	14	-	58208810-58208859	14qC3	Mus musculus exportin 4 (Xpo4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		mKIAA1721; B430309A01Rik	mKIAA1721; B430309A01Rik
Mus musculus	RefSeq	ILMN_185320	ILMN_185320	XPO4	NM_020506.1	NM_020506.1		57258	10048437	NM_020506.1	Xpo4	NP_065252.1	ILMN_2952725	004200435	S	3120	AGAAACGGATTCACCACTTTTTCTAGCAACACGACACTTCCTTAAGCTGG	14	-	58203525-58203529:58204704-58204748	14qC3	Mus musculus exportin 4 (Xpo4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		mKIAA1721; B430309A01Rik	mKIAA1721; B430309A01Rik
Mus musculus	RefSeq	ILMN_200839	ILMN_200839	LOC382230	XM_356342.1	XM_356342.1			38086465	XM_356342.1	LOC382230		ILMN_2540188	002900634	S	70	AGCCATGACGAGCTGTTCTCCGACATCTACAAGATCCGGGAGATCGCGGA										
Mus musculus	RefSeq	ILMN_221408	ILMN_228243	POP1	NM_026340.2	NM_026340.2		67724	142359784	NM_026340.2	Pop1	NP_080616.1	ILMN_2738503	000940670	S	3025	ATGACCGGCTTGCTGGAAATGTTGTCCAGCCAGTCAGCAGCCATGAGGGG	15	+	34460142-34460191	15qB3.1	Mus musculus processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) (Pop1), transcript variant 2, mRNA.			Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]	4932434G09Rik; MGC36536	4932434G09Rik; MGC36536
Mus musculus	RefSeq	ILMN_200990	ILMN_240338	ADAMTSL3	XM_984557.1	XM_984557.1		269959	94380711	XM_984557.1	Adamtsl3	XP_989651.1	ILMN_1239668	002350577	S	290	ACGGCGAGACTCCGCTGGAACGCTTCTCCGCCCGCTTCCTGGAAGCCACT				7qD3	PREDICTED: Mus musculus ADAMTS-like 3 (Adamtsl3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_215772	ILMN_240338	ADAMTSL3	XM_984557.1	XM_984557.1		269959	94380711	XM_984557.1	Adamtsl3	XP_989651.1	ILMN_2709011	002570671	S	1326	TAATGCCAAGGAGGACAATTGTGGCGTCTGTGCTGGGGACGGCTCCACCT				7qD3	PREDICTED: Mus musculus ADAMTS-like 3 (Adamtsl3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_209713	ILMN_209713	TAS2R135	NM_199159.1	NM_199159.1		387512	40255300	NM_199159.1	Tas2r135	NP_954610.1	ILMN_2598457	004810129	S	575	ATAGCTTAAGACACTCACTTGAGAAATTCTACTTCTTTTCTATAAAGATA	6	+	42356102-42356151	6qB2.1	Mus musculus taste receptor, type 2, member 135 (Tas2r135), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence NAS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mt2r38; Tas2r35	mt2r38; Tas2r35
Mus musculus	RefSeq	ILMN_216784	ILMN_257482	6430526N21RIK	NM_001033383.2	NM_001033383.2		319748	142353262	NM_001033383.2	6430526N21Rik	NP_001028555.1	ILMN_1241125	000430259	S	3562	GGAACTGATTTGAGACCCCGAGACTCCCTTCCATGATGCTCTCAGCCACC	7	+	4984429-4984478	7qA1	Mus musculus RIKEN cDNA 6430526N21 gene (6430526N21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_207321	ILMN_312719	LOC100039773	XM_001473483.1	XM_001473483.1		100039773	149270261	XM_001473483.1	LOC100039773	XP_001473533.1	ILMN_1258825	004150092	S	350	GAGGCCTGGGGATTGGGGACAGGACTAAGACGGGAGATGGAAAAAGCTGC	19	+	6080703-6080704:6080705-6080752	19qA	PREDICTED: Mus musculus hypothetical protein LOC100039773 (LOC100039773), mRNA.					
Mus musculus	Riken	ILMN_207236	ILMN_207236	G430079N04RIK	ri|G430079N04|PH00001H24|AK090050|1929					AK090050	G430079N04Rik		ILMN_1234626	003440523	S	1695	ACTCTGGTGTGCGGGTCATGTGTAAGGGGTGTGGCACTCTACCTGCTACC										
Mus musculus	RefSeq	ILMN_192807	ILMN_261048	TMEM186	NM_025708.3	NM_025708.3		66690	146134944	NM_025708.3	Tmem186	NP_079984.2	ILMN_2491519	003870037	S	179	TTGTCACCGGAAAGTTGAAGGGCGCATGCGCGGGCGGTTAAAAACCCGCA				16qA1	Mus musculus transmembrane protein 186 (Tmem186), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4432406C05Rik; AI648175; 2810440M13Rik; AW210586	4432406C05Rik; AI648175; 2810440M13Rik; AW210586
Mus musculus	RefSeq	ILMN_195395	ILMN_261048	TMEM186	NM_025708.3	NM_025708.3		66690	146134944	NM_025708.3	Tmem186	NP_079984.2	ILMN_1244936	000620538	S	2503	CGCCGCTGGCTAGTTCCAGCACTTCACTCTCCCAGATAGGATGTAGGCAC				16qA1	Mus musculus transmembrane protein 186 (Tmem186), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4432406C05Rik; AI648175; 2810440M13Rik; AW210586	4432406C05Rik; AI648175; 2810440M13Rik; AW210586
Mus musculus	RefSeq	ILMN_184667	ILMN_184667	TRPM8	NM_134252.2	NM_134252.2		171382	21729789	NM_134252.2	Trpm8	NP_599013.1	ILMN_2420538	002350215	S	3752	ACATCAAGTAAGGCTGGCGATGCTTGTGGGGAGAAACCAAATCACAATGA	1	+	90281278-90281288:90281289-90281327	1qD	Mus musculus transient receptor potential cation channel, subfamily M, member 8 (Trpm8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]; The series of events required for an organism to receive a temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. Thermoception in larger animals is mainly done in the skin; mammals have at least two types of sensor, for detecting heat (temperatures above body temperature) and cold (temperatures below body temperature) [goid 50955] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]	TRPP8; CMR1; Trp-p8; LTRPC6; MGC2849	TRPP8; CMR1; Trp-p8; LTRPC6; MGC2849
Mus musculus	RefSeq	ILMN_211917	ILMN_211917	COMMD9	NM_029635.3	NM_029635.3		76501	146149069	NM_029635.3	Commd9	NP_083911.1	ILMN_2620729	000290309	S	835	AGGGAATGTGTTCTTTATCAGCCGCCTGTGCGTGCTGCTGTGGAGAGCTC				2qE2	Mus musculus COMM domain containing 9 (Commd9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA409293; 1810029F08Rik	AA409293; 1810029F08Rik
Mus musculus	RefSeq	ILMN_195401	ILMN_257274	NCAM1	NM_001081445.1	NM_001081445.1		17967	124517688	NM_001081445.1	Ncam1	NP_001074914.1	ILMN_1237421	006270521	S	3187	GGACACTCCGTTCCCTGAAACCATTTAAAATTCAGACAAAAGGGCCCCAG	9	-	49313198-49313247	9qA5.3	Mus musculus neural cell adhesion molecule 1 (Ncam1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The attachment of a cell to a second cell of the identical type via adhesion molecules [goid 34109] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	CD56; NCAM-140; NCAM-1; NCAM-180; Ncam; NCAM-120; E-NCAM	CD56; NCAM-140; NCAM-1; NCAM-180; Ncam; NCAM-120; E-NCAM
Mus musculus	RefSeq	ILMN_257274	ILMN_257274	NCAM1	NM_001081445.1	NM_001081445.1		17967	124517688	NM_001081445.1	Ncam1	NP_001074914.1	ILMN_3102825	003120519	A	2152	ACCCAAGCTGGAAGGGCAGATGGGAGAGGACGGGAACTCCATCAAGGTGA	9	-	49331688-49331737	9qA5.3	Mus musculus neural cell adhesion molecule 1 (Ncam1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The attachment of a cell to a second cell of the identical type via adhesion molecules [goid 34109] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	CD56; NCAM-140; NCAM-1; NCAM-180; Ncam; NCAM-120; E-NCAM	CD56; NCAM-140; NCAM-1; NCAM-180; Ncam; NCAM-120; E-NCAM
Mus musculus	Riken	ILMN_203407	ILMN_203407	SPNR	ri|6030405K23|PX00056I08|AK031315|1747					AK031315	Spnr		ILMN_1231849	000060575	S	1480	TTACACGTAGGGACTAGGCACAGTGGCACATACACTTGGGACGCAGAGGC										
Mus musculus	Riken	ILMN_205919	ILMN_205919	DACH2	ri|B130041E18|PX00157D21|AK045154|4455					AK045154	Dach2		ILMN_2576193	004390377	S	4292	TCCCCAAACTACTCCTCCTCAGGTTACCTTCAGAAAAGGTCAGGCCTCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_236981	ILMN_236981	OXNAD1	NM_145460.1	NM_145460.1		218885	21703913	NM_145460.1	Oxnad1	NP_663435.1	ILMN_3009558	003930392	S	1278	GCAGGCTGACAGTCTGAGGGCCACATTTCAGATTGCCATAAAGGAGGGGG	14	+	32915827-32915876	14qB	Mus musculus oxidoreductase NAD-binding domain containing 1 (Oxnad1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AW492292; MGC30933; BC019806; 2410002F01Rik	AW492292; MGC30933; BC019806; 2410002F01Rik
Mus musculus	RefSeq	ILMN_197588	ILMN_259331	EG668300	XM_001000750.1	XM_001000750.1		668300	94369747	XM_001000750.1	EG668300	XP_001000750.1	ILMN_1226587	000150224	S	756	CTGCAGATTGGGTACCTGACTGTTGACTCGGTGCTGCACTCCTTCATCAA	3	+	93082741-93082790	3qF2.1	PREDICTED: Mus musculus predicted gene, EG668300 (EG668300), mRNA.					
Mus musculus	Riken	ILMN_205194	ILMN_205194	D030020N12RIK	ri|D030020N12|PX00179F23|AK050806|1924					AK050806	D030020N12Rik		ILMN_1232257	002340674	S	1448	CCCAGGTTCTGTGAATCTAGTGGCAGGGAAAAGGAGATGGAGAAGACAAT										
Mus musculus	RefSeq	ILMN_216173	ILMN_245048	LOC668706	XM_001003212.2	XM_001003212.2		668706	149262009	XM_001003212.2	LOC668706	XP_001003212.1	ILMN_2668083	004880064	S	312	TCATCAAAGCCCTCAAGGAGCCACCGAGAGACAGGAAGAAGCAGAAGAAC	11	-	82841208-82841257	11qC	PREDICTED: Mus musculus similar to Ribosomal protein L12 (LOC668706), mRNA.					
Mus musculus	RefSeq	ILMN_197435	ILMN_241955	TUBB1	NM_001080971.1	NM_001080971.1		545486	124430499	NM_001080971.1	Tubb1	NP_001074440.1	ILMN_1243113	006650414	S	1331	TGTCAGAGCAGGGCTAGAGGACAGTGAAGAGGATGTGGAGGAGGCAGAGG	2	+	174283308-174283357	2qH4	Mus musculus tubulin, beta 1 (Tubb1), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart [goid 51225] [evidence IDA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IDA]	2810484G07Rik; M(beta)1	2810484G07Rik; M(beta)1
Mus musculus	RefSeq	ILMN_241955	ILMN_241955	TUBB1	NM_001080971.1	NM_001080971.1		545486	124430499	NM_001080971.1	Tubb1	NP_001074440.1	ILMN_2987747	006280458	S	86	TGGCAACCAGATCGGAGCCAAGTTCTGGGAGGTGATCGGGGAAGAACATG	2	+	174276281-174276302:174281158-174281185	2qH4	Mus musculus tubulin, beta 1 (Tubb1), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart [goid 51225] [evidence IDA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IDA]	2810484G07Rik; M(beta)1	2810484G07Rik; M(beta)1
Mus musculus	Riken	ILMN_203527	ILMN_203527	0610035N01RIK	ri|5330402M06|PX00053E21|AK030365|4168					AK030365	0610035N01Rik		ILMN_1228112	006060528	S	3984	TGGTCCATCGGGAGCCATGAAGTTGGTTACTGGCCTGGGGTTCTTCTCTG										
Mus musculus	RefSeq	ILMN_188194	ILMN_259725	SLCO4C1	NM_172658.1	NM_172658.1		227394	27369941	NM_172658.1	Slco4c1	NP_766246.1	ILMN_2643556	006840450	S	3098	AAGAACCAGCTTCAATGACAAAAAGTGCCAAGTAGACATGACAAGATGTC	1	-	98648400-98648449	1qD	Mus musculus solute carrier organic anion transporter family, member 4C1 (Slco4c1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISO]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISO]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	OATP-M1; 9530051F04; SLC21A20; OATPX; OATP4C1; OATP-H; PRO2176; C330017E21Rik	OATP-M1; 9530051F04; SLC21A20; OATPX; OATP4C1; OATP-H; PRO2176; C330017E21Rik
Mus musculus	Riken	ILMN_204416	ILMN_204416	A230078H02RIK	ri|A230078H02|PX00129E08|AK038954|2062					AK038954	A230078H02Rik		ILMN_1241658	000510360	S	1567	GGCTTTTGAGTGGCACCTTTCTGCGTCTGTGTTTGCCAAGATGACAGTCC										
Mus musculus	RefSeq	ILMN_220227	ILMN_220227	PIGR	NM_011082.2	NM_011082.2		18703	31981569	NM_011082.2	Pigr	NP_035212.2	ILMN_1225605	006510373	S	3096	CTGTCTTCAAGACCTCTGCTCTTATTAGAGGGAGAACTTTAGCATGGGGG	1	+	132743909-132743958	1qE4	Mus musculus polymeric immunoglobulin receptor (Pigr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214903	ILMN_258733	EG623818	XM_888318.3	XM_888318.3		623818	149234279	XM_888318.3	EG623818	XP_893411.2	ILMN_2657124	000780164	S	161	GTGTGTTGCACGATCCTGAAACTCTGCTTCGCTGCATTGCTGAAAGGGCT	1	+	138689708-138689757	1qE4	PREDICTED: Mus musculus predicted gene, EG623818 (EG623818), mRNA.					
Mus musculus	RefSeq	ILMN_209107	ILMN_230175	ZNFX1	NM_001033196.2	NM_001033196.2		98999	124487310	NM_001033196.2	Znfx1	NP_001028368.2	ILMN_2607648	006480653	S	3665	GATCTGGCCAAGAACTTCAACCTTGAGGTGTCCCTGTTTGAACGGCTGGT	2	-	166865695-166865744	2qH3	Mus musculus zinc finger, NFX1-type containing 1 (Znfx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	RP23-19L12.5	RP23-19L12.5
Mus musculus	RefSeq	ILMN_209107	ILMN_230175	ZNFX1	NM_001033196.2	NM_001033196.2		98999	124487310	NM_001033196.2	Znfx1	NP_001028368.2	ILMN_1219468	004490239	S	6943	CAGCAGCACCTCCTGTGAGTCTTTATCCAGGCACCCTCCCTTGCAGCCTT	2	-	166861518-166861567	2qH3	Mus musculus zinc finger, NFX1-type containing 1 (Znfx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	RP23-19L12.5	RP23-19L12.5
Mus musculus	MEEBO	ILMN_187556	ILMN_187556	C330023M02RIK	scl27279.25_477				27370057	NM_172722	C330023M02Rik		ILMN_2656171	006020056	S	3991	CCCCAGAGATAGTGCCAGCCATTGTTTGAGGCATGCTTGTGCTCTTTTGC								The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187556	ILMN_187556	C330023M02RIK	scl27279.25_477				27370057	NM_172722	C330023M02Rik		ILMN_1248651	002940278	S	2	GCAGGAATCGGGTTCAAGTTACTTCTTTGCTGTGGACGGATAGTCCTCTG								The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_202802	ILMN_202802	5930437L24RIK	ri|5930437L24|PX00055N03|AK031254|2184					AK031254	5930437L24Rik		ILMN_1215324	004120253	S	1710	AGGTTGGAAGCAGAAACCCCTAGACTGTTGTGTCGGGAGATGGAGCCCTC										
Mus musculus	MEEBO	ILMN_196001	ILMN_196001	2010107G12RIK	scl29162.1.1_12						2010107G12Rik		ILMN_2520710	006220670	S	18	TATTCTGGTGGATCAGGAGGAGGAGGCGTGCTGTGGAACAGGGGCGGGCT										
Mus musculus	RefSeq	ILMN_214486	ILMN_214486	KCNIP1	NM_027398.2	NM_027398.2		70357	27754024	NM_027398.2	Kcnip1	NP_081674.2	ILMN_2968369	007150168	S	1430	CCATGAAAATATTGGGAGAGGCAGCACCTAACACATGTAGAATAGGACTG	11	-	33530059-33530108	11qA4	Mus musculus Kv channel-interacting protein 1 (Kcnip1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	Kchip1.2; AI842357; 2900046L02Rik; KCHIP1; AW494471; 3202002F18Rik	Kchip1.2; AI842357; 2900046L02Rik; KCHIP1; AW494471; 3202002F18Rik
Mus musculus	RefSeq	ILMN_214486	ILMN_214486	KCNIP1	NM_027398.2	NM_027398.2		70357	27754024	NM_027398.2	Kcnip1	NP_081674.2	ILMN_1219628	007610482	S	953	TGAGATCTCTACAGCTGTTCCAAAATGTCATGTAACTGAGGACACTGGCC	11	-	33530536-33530550:33530551-33530585	11qA4	Mus musculus Kv channel-interacting protein 1 (Kcnip1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	Kchip1.2; AI842357; 2900046L02Rik; KCHIP1; AW494471; 3202002F18Rik	Kchip1.2; AI842357; 2900046L02Rik; KCHIP1; AW494471; 3202002F18Rik
Mus musculus	RefSeq	ILMN_211184	ILMN_317031	LOC100044531	XM_001472661.1	XM_001472661.1		100044531	149256746	XM_001472661.1	LOC100044531	XP_001472711.1	ILMN_1260379	003140240	S	2343	AGGGAACAACTGAACACAGAATATGAACAAGCAGAAGAGGGCCAAGGAGC					PREDICTED: Mus musculus similar to Leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 (LOC100044531), mRNA.					
Mus musculus	RefSeq	ILMN_222917	ILMN_222917	CCDC130	NM_026350.2	NM_026350.2		67736	142355090	NM_026350.2	Ccdc130	NP_080626.1	ILMN_2756733	000160148	S	1534	TGAGAATGCCTGTGCCTTGATGTAACCCTGATACCTGAGCATTAAAGTGC	8	-	86782209-86782258	8qC3	Mus musculus coiled-coil domain containing 130 (Ccdc130), mRNA.				C77430; 4930527D15Rik	C77430; 4930527D15Rik
Mus musculus	RefSeq	ILMN_186271	ILMN_256257	FNBP1	NM_019406.2	NM_019406.2		14269	84662772	NM_019406.2	Fnbp1	NP_062279.1	ILMN_2723708	003940471	S	1774	CGACTAACGAGAGCCTAGATTGCATGTCACTGTCTGCATGAGCTTTGGGT	2	-	30908908-30908957	2qB	Mus musculus formin binding protein 1 (Fnbp1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FBP1; 1110057E06Rik; Fbp17; 2210010H06Rik	FBP1; 1110057E06Rik; Fbp17; 2210010H06Rik
Mus musculus	RefSeq	ILMN_199607	ILMN_199607	LOC382785	XM_356674.1	XM_356674.1			38074985	XM_356674.1	LOC382785		ILMN_1259031	004490477	S	997	CCAGTTTTCCAAGGCAAATACGGTCTGGAGAGAGTAACTGAGGAGGACAG										
Mus musculus	RefSeq	ILMN_220052	ILMN_220052	CCL17	NM_011332.2	NM_011332.2		20295	31981506	NM_011332.2	Ccl17	NP_035462.1	ILMN_2717015	006620437	S	237	GGGCAAGCTCATCTGTGCAGACCCCAAAGACAAACATGTGAAGAAGGCCA	8	+	97335675-97335724	8qC5	Mus musculus chemokine (C-C motif) ligand 17 (Ccl17), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [evidence TAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence TAS]	Scya17l; ABCD-2; Scya17; TARC	Scya17l; ABCD-2; Scya17; TARC
Mus musculus	RefSeq	ILMN_198965	ILMN_244169	LOC666218	XM_982360.2	XM_982360.2		666218	149260359	XM_982360.2	LOC666218	XP_987454.2	ILMN_2533559	006250367	S	880	ACTGAGTGTCAGTTAGCAACACTGGGCCCCAACCCTCTGTGCTCATCAGC	9	+	122680246-122680295	9qF4	PREDICTED: Mus musculus gene model 847, (NCBI) (LOC666218), mRNA.					
Mus musculus	RefSeq	ILMN_216146	ILMN_216146	SCCPDH	NM_178653.3	NM_178653.3		109232	142382199	NM_178653.3	Sccpdh	NP_848768.1	ILMN_1232766	005340288	S	1848	GCTTTCTCACCCATCTACTCCATGGACTGATCTTGGATTGTTTAACTCAG	1	+	181617241-181617290	1qH4	Mus musculus saccharopine dehydrogenase (putative) (Sccpdh), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: 6-(L-1,3-dicarboxypropyl)-L-lysine + NAD+ + H2O = L-glutamate + 2-aminoadipate 6-semialdehyde + NADH + H+ [goid 47131] [evidence IEA]	AW214504; C330023F11Rik	AW214504; C330023F11Rik
Mus musculus	RefSeq	ILMN_200721	ILMN_200721	LOC381829	XM_358660.1	XM_358660.1			38085465	XM_358660.1	LOC381829		ILMN_1231545	001470228	S	575	TGCAACTTGTGGAGCTCGGCGGCCCTCCGCCTCAGATGGCAGTCAAAACT										
Mus musculus	Riken	ILMN_202138	ILMN_202138	2900056M07RIK	ri|2900056M07|ZX00069D23|AK013705|1391					AK013705	2900056M07Rik		ILMN_1233814	002000196	S	1155	ACTCCAGTGGGCTGAGACTAGTAGCTCTTTGGGGAACACAGTGGCAGGAG										
Mus musculus	RefSeq	ILMN_208865	ILMN_208865	UNC45A	NM_133952.1	NM_133952.1		101869	19527171	NM_133952.1	Unc45a	NP_598713.1	ILMN_1255175	005670129	S	2978	TCAGCACTGGGATGCTCGATACTTGCCTCGCCTCCACAGCTGCCACAGTT	7	-	87470402-87470451	7qD3	Mus musculus unc-45 homolog A (C. elegans) (Unc45a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW538196	AW538196
Mus musculus	RefSeq	ILMN_208865	ILMN_208865	UNC45A	NM_133952.1	NM_133952.1		101869	19527171	NM_133952.1	Unc45a	NP_598713.1	ILMN_1253134	005910519	S	3166	AAGGACACAACAGCATCCTCACATGCTGGGAGCATCATCAGAGCCTGCCA	7	-	87470214-87470263	7qD3	Mus musculus unc-45 homolog A (C. elegans) (Unc45a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW538196	AW538196
Mus musculus	RefSeq	ILMN_211932	ILMN_211932	OLFR705	NM_147032.2	NM_147032.2		259034	153945797	NM_147032.2	Olfr705	NP_667243.2	ILMN_1221409	003520167	S	722	GTTCTTCACATCTGACTGTAGTTGGAATGTTCTATGGGGCTGCCACATTC				7qE3	Mus musculus olfactory receptor 705 (Olfr705), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR283-2	MOR283-2
Mus musculus	RefSeq	ILMN_186753	ILMN_312264	LOC100040573	XM_001475112.1	XM_001475112.1		100040573	149264803	XM_001475112.1	LOC100040573	XP_001475162.1	ILMN_2438212	007330435	S	2484	CTATCCAGTGGCTACAAATGTTGTCCCCACAACAGAAACGGTGGTGGCAG	13|NT_166323.1	+	37349-37398		PREDICTED: Mus musculus similar to putative transcription factor ZNF131, transcript variant 1 (LOC100040573), mRNA.					
Mus musculus	Riken	ILMN_202040	ILMN_202040	2210418B03RIK	ri|2210418B03|ZX00054J12|AK008972|1492					AK008972	2210418B03Rik		ILMN_1259402	006100041	S	1245	GCTTAGACCTGGGTGGTCTTCCTGCTTCTGTTTCTGAAAGCCAGGGAGCC										
Mus musculus	RefSeq	ILMN_193498	ILMN_193498	V1RH9	NM_134218.1	NM_134218.1		171252	21717744	NM_134218.1	V1rh9	NP_598979.1	ILMN_2497756	003440152	S	738	CTACTGGACAGATTGTGCCTTTTCTTTAATTATAAACATCTCTTCAAAGG	13	-	22864407-22864456	13qA3.1	Mus musculus vomeronasal 1 receptor, H9 (V1rh9), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_250222	ILMN_250222	POLR2H	NM_145632.1	NM_145632.1		245841	21704117	NM_145632.1	Polr2h	NP_663607.1	ILMN_2874443	001660593	S	534	GAAGCTGGCCTTCTGAACTTCGTGGGAAACCAGACTTGCTGCTTAGTCAC	16	+	20635555-20635570:20635571-20635604	16qB1	Mus musculus polymerase (RNA) II (DNA directed) polypeptide H (Polr2h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	MGC8248; MGC103049	MGC8248; MGC103049
Mus musculus	Riken	ILMN_207238	ILMN_207238	G430046L24RIK	ri|G430046L24|PH00001L22|AK089991|1269					AK089991	G430046L24Rik		ILMN_1242850	004560682	S	487	GCCACTTCGCTCCAGTGTCGCGGACGTTGAGAGGCCTCAACAGATACAAA										
Mus musculus	RefSeq	ILMN_211001	ILMN_211001	APC2	NM_011789.2	NM_011789.2		23805	117938321	NM_011789.2	Apc2	NP_035919.2	ILMN_2820314	003370035	S	8701	AGAGCTGACGAGCCCTTAGATTCAGAGCAGGAGGGGTCTGCTAGCCGCCA	10	+	79780628-79780677	10qC1	Mus musculus adenomatosis polyposis coli 2 (Apc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Complex of peripheral cytoplasmic proteins (alpha-, beta- and gamma-catenin) that interact with the cytoplasmic region of uvomorulin/E-cadherin to connect it to the actin cytoskeleton [goid 16342] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence ISO]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]	APCL; AI852447; R75424	APCL; AI852447; R75424
Mus musculus	RefSeq	ILMN_199330	ILMN_225810	LOC673589	XM_001005911.1	XM_001005911.1		673589	94420351	XM_001005911.1	LOC673589	XP_001005911.1	ILMN_1251714	002030014	S	633	GGTCAGTGCCTGGGAAGAAAGGAGCATCCAGGGTATAGTTAAGAAGAAGC					PREDICTED: Mus musculus similar to Cytochrome P450 2B9 (CYPIIB9) (Testosterone 16-alpha hydroxylase) (P450-16-alpha) (Clone PF26) (LOC673589), mRNA.					
Mus musculus	RefSeq	ILMN_190383	ILMN_190383	UBL5	NM_025401.3	NM_025401.3		66177	141801752	NM_025401.3	Ubl5	NP_079677.1	ILMN_2469689	000830209	S	1521	GGGGTTCCTCGCTCGAGCTACGAGTTGTGTCGTCGATAGGTTCGAGGATA	9	+	20449282-20449331	9qA3	Mus musculus ubiquitin-like 5 (Ubl5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		beacon; 1110030M22Rik	beacon; 1110030M22Rik
Mus musculus	RefSeq	ILMN_218515	ILMN_218515	RAC3	NM_133223.2	NM_133223.2		170758	34328345	NM_133223.2	Rac3	NP_573486.1	ILMN_2696749	007400673	S	513	CGATTGAACGGCTGCGGGACAAGAAGCTGGCACCCATAACCTACCCCCAA	11	+	120539356-120539405	11qE2	Mus musculus RAS-related C3 botulinum substrate 3 (Rac3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISO]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence ISO]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence ISO]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence ISO]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rac1B	Rac1B
Mus musculus	RefSeq	ILMN_189969	ILMN_189969	UBL4	NM_145405.1	NM_145405.1		27643	21703809	NM_145405.1	Ubl4	NP_663380.1	ILMN_2466034	004040176	S	272	GTTGTTAAGCCTTTGGAGAAGGTGCTACTGGAAGAAGGGTCTGCCCACAG	X	-	71614767-71614816	XqA7.3	Mus musculus ubiquitin-like 4 (Ubl4), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		DXHXS254E; DXS254E; DXS254Eh; Gdx	DXHXS254E; DXS254E; DXS254Eh; Gdx
Mus musculus	RefSeq	ILMN_205138	ILMN_327480	LOC100040088	XM_001474061.1	XM_001474061.1		100040088	149268134	XM_001474061.1	LOC100040088	XP_001474111.1	ILMN_1220116	005220102	S	456	GACTGCCTTGGATGCAGGACGTAGGTAGAGAAGGGCGGAAGCTGTCGATA	16	+	87439227-87439276	16qC3.3	PREDICTED: Mus musculus hypothetical protein LOC100040088 (LOC100040088), mRNA.					
Mus musculus	RefSeq	ILMN_196382	ILMN_196382	1100001F19RIK	XM_124187.1	XM_124187.1			20878323	XM_124187.1	1100001F19Rik		ILMN_2523903	000460068	S	181	GGCCGGACCTTTGAGTACACCTCGGGATAGTGAGGAGCCCGGCGAAAAGC										
Mus musculus	MEEBO	ILMN_189996	ILMN_189996	9430088F20RIK	scl0230837.11_109				51709530	XM_485459	9430088F20Rik		ILMN_1245339	006100438	S	20	TATCAAAGGATTCCTGGGGGAAGGGACGAATTCCCCTGGGAGACTCTTGG										
Mus musculus	MEEBO	ILMN_187652	ILMN_187652	TSSC8	scl30457.1.214_244						Tssc8		ILMN_2445958	006900609	S	15	CGCAGCATCTTCCTTCTCAGCCAAAGGGCCTACTCGTTAGGGTGATTTGC										
Mus musculus	RefSeq	ILMN_217556	ILMN_217556	2610044O15RIK	NM_153780.1	NM_153780.1		72139	24418877	NM_153780.1	2610044O15Rik	NP_722475.1	ILMN_1260441	001570730	S	1150	GCAGGAAACAAGCCCAGGTCACTTTCTTGTATTAGTTCTCATGACTTTGG	17	-	95119097-95119146		Mus musculus RIKEN cDNA 2610044O15 gene (2610044O15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215418	ILMN_215418	CML5	NM_023493.1	NM_023493.1		69049	23956197	NM_023493.1	Cml5	NP_075982.1	ILMN_2659237	004830136	S	840	TTCTATAATTCATTTCACATATTCTTTCCCTTCTACTCAGAAACATGAAC	6	-	85767279-85767286:85767287-85767328	6qC3	Mus musculus camello-like 5 (Cml5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence ISA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence NAS]	1810018F03Rik	1810018F03Rik
Mus musculus	RefSeq	ILMN_209353	ILMN_209353	4832428D23RIK	NM_207281.3	NM_207281.3		403183	146198803	NM_207281.3	4832428D23Rik	NP_997164.1	ILMN_1246249	006420082	S	2798	GATGAGGTCTGAAGAGAGGCTGTAGGAAGTAGATCATGGAAGCCCTGTTC				1qC1.1	Mus musculus RIKEN cDNA 4832428D23 gene (4832428D23Rik), mRNA.				Gm991	Gm991
Mus musculus	RefSeq	ILMN_211555	ILMN_228235	NSL1	NM_198654.2	NM_198654.2		381318	56711342	NM_198654.2	Nsl1	NP_941056.2	ILMN_2617071	000650048	S	372	GTGGCAACCAAACGGAGGCAGTATCCCAGAAGGATCCTTGAGAGTGTCAT	1	+	192893919-192893968	1qH6	Mus musculus NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) (Nsl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		AI451597; Gm105; 4833432M17Rik; Gm984	AI451597; Gm105; 4833432M17Rik; Gm984
Mus musculus	RefSeq	ILMN_218516	ILMN_246864	LYPD6	NM_177139.3	NM_177139.3		320343	47271527	NM_177139.3	Lypd6	NP_796113.1	ILMN_2729745	003440224	S	2390	CCCGCTCAGGCACCAAATCTGAACCGACGGCAGAAACTCTGATGCAAGTC	2	+	50047975-50048024	2qC1.1	Mus musculus LY6/PLAUR domain containing 6 (Lypd6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			E130115E03Rik	E130115E03Rik
Mus musculus	RefSeq	ILMN_218516	ILMN_246864	LYPD6	NM_177139.3	NM_177139.3		320343	47271527	NM_177139.3	Lypd6	NP_796113.1	ILMN_1218538	000520692	S	3259	GCCAAGGAGGGACCATTCCTGTAGAAGGTCCAGGACTAGTTACCCATGTG	2	+	50048844-50048893	2qC1.1	Mus musculus LY6/PLAUR domain containing 6 (Lypd6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			E130115E03Rik	E130115E03Rik
Mus musculus	RefSeq	ILMN_222298	ILMN_222298	CNKSR3	NM_172546.2	NM_172546.2		215748	141802317	NM_172546.2	Cnksr3	NP_766134.1	ILMN_2747623	002260671	S	3384	GACCCACTCCTGGCCGTTGGCAGTGTGGGCACTTATATTAAAGACGGAAA	10	+	3227415-3227464	10qA1	Mus musculus Cnksr family member 3 (Cnksr3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC024086; MGC37681; Magi1; 6820402C05	BC024086; MGC37681; Magi1; 6820402C05
Mus musculus	RefSeq	ILMN_197679	ILMN_197679	LOC229879	XM_143595.2	XM_143595.2			38077291	XM_143595.2	LOC229879		ILMN_2528977	004220075	S	123	GGAGAAGAGGTTCTGCCTGATGGCCGTGAAGTTCCTTTGGGCTTCTGAGG										
Mus musculus	RefSeq	ILMN_249102	ILMN_317869	C130026I21RIK	NM_175219.3	NM_175219.3		620078	130495347	NM_175219.3	C130026I21Rik	NP_780428.1	ILMN_3162925	002340445	I	1344	TCTCAGAGCTGGTGCAGGGGTCGAGGGATACATGACCTCCGTGTTAGCAG	1	-	85243496-85243511:85243512-85243545	1qC5	Mus musculus RIKEN cDNA C130026I21 gene (C130026I21Rik), transcript variant 1, mRNA.				4930565N07Rik	4930565N07Rik
Mus musculus	RefSeq	ILMN_213021	ILMN_317869	C130026I21RIK	NM_175219.3	NM_175219.3		620078	130495347	NM_175219.3	C130026I21Rik	NP_780428.1	ILMN_1234720	006220725	S	1904	CTCAGCTAGACTCTGAATCCTTATCTCTGGTACTGTTGTTCTCTGCTAAA	1	-	85242936-85242985	1qC5	Mus musculus RIKEN cDNA C130026I21 gene (C130026I21Rik), transcript variant 1, mRNA.				4930565N07Rik	4930565N07Rik
Mus musculus	MEEBO	ILMN_185662	ILMN_185662	4631426J05RIK	scl30585.9_24				31560039	NM_029935	4631426J05Rik		ILMN_2428931	000270370	S	20	TATTTAAAATAATTAAAGATGGACCCACACAACTGGTGCCTGCCAAGAGT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reactions: 3'-phosphoadenylyl sulfate + dermatan = adenosine 3',5'-bisphosphate + dermatan 6'-sulfate and 3'-phosphoadenylyl sulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 6'-sulfate [goid 50659] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188616	ILMN_188616	TRBV6_AE000663_T_CELL_RECEPTOR_BETA_VARIABLE_6_11	TRBV6_AE000663_T_cell_receptor_beta_variable_6_11						TRBV6_AE000663_T_cell_receptor_beta_variable_6_11		ILMN_2454209	004570719	S	11	TGGGTAACCCTTTGTCTCCTTACTGTAGAGACCACACATGGTGATGGTGG										
Mus musculus	RefSeq	ILMN_220078	ILMN_220078	AF067061	NM_199060.1	NM_199060.1		236546	39979621	NM_199060.1	AF067061	NP_951015.1	ILMN_2717345	001400564	S	455	GAGTCAGAGGAAGCCACAAGTGTCCCCAGGAGATGTGGAAAGCTACAAAG	Un	-	991-1040		Mus musculus cDNA sequence AF067061 (AF067061), mRNA.					
Mus musculus	RefSeq	ILMN_238071	ILMN_238071	ADAMTS17	NM_001033877.1	NM_001033877.1		233332	85702168	NM_001033877.1	Adamts17	NP_001029049.1	ILMN_2881801	002230332	S	1554	CTGCAAAAACATGGAGCATTTGATGTGTGCTGGGCTGTGGTGCCTGGTAG	7	+	66883426-66883440:66906757-66906791	7qC	Mus musculus ADAM metallopeptidase with thrombospondin type 1 motif, 17 (Adamts17), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212102	ILMN_212102	PABPC5	NM_053114.2	NM_053114.2		93728	142370786	NM_053114.2	Pabpc5	NP_444344.1	ILMN_2622755	002100136	S	2308	TGACATGTGTTTTATTAAGGAATATGTTTTCCCTTATTTAGGTCATACCT	X	+	117043648-117043697	XqE1	Mus musculus poly A binding protein, cytoplasmic 5 (Pabpc5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC130340; MGC130341; C820015E17	MGC130340; MGC130341; C820015E17
Mus musculus	RefSeq	ILMN_215793	ILMN_215793	TRMT2B	NM_172540.1	NM_172540.1		215201	27369763	NM_172540.1	Trmt2b	NP_766128.1	ILMN_2912170	000290189	S	2724	CCATGTCAAGTTGCTCATTACTGCCTATGACTCTAGTTCCAGGGTATCTG	X	-	130757937-130757986	XqE3	Mus musculus TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae) (Trmt2b), mRNA.				RP23-162B19.2	RP23-162B19.2
Mus musculus	RefSeq	ILMN_215793	ILMN_215793	TRMT2B	NM_172540.1	NM_172540.1		215201	27369763	NM_172540.1	Trmt2b	NP_766128.1	ILMN_1251534	001230307	S	875	TCACTAAAGGCCCTGGAGCGATCTGTGAATTGACCTCGCTCTATTTCCAG	X	-	130775520-130775569	XqE3	Mus musculus TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae) (Trmt2b), mRNA.				RP23-162B19.2	RP23-162B19.2
Mus musculus	RefSeq	ILMN_215793	ILMN_215793	TRMT2B	NM_172540.1	NM_172540.1		215201	27369763	NM_172540.1	Trmt2b	NP_766128.1	ILMN_1236357	000450463	S	2958	ACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTGGAGG	X	-	130757703-130757752	XqE3	Mus musculus TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae) (Trmt2b), mRNA.				RP23-162B19.2	RP23-162B19.2
Mus musculus	RefSeq	ILMN_214092	ILMN_237263	KLRA17	NM_133203.1	NM_133203.1		170733	46559407	NM_133203.1	Klra17	NP_573466.1	ILMN_1246517	007320138	S	1024	GGAATGTTCCCTGGAATCTGATGTGGCAGAGGCTTCTTCCTACCTGGTGG	6	-	129781288-129781337	6qF3	Mus musculus killer cell lectin-like receptor, subfamily A, member 17 (Klra17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ly49q1; Ly-49Q; Ly49q	Ly49q1; Ly-49Q; Ly49q
Mus musculus	MEEBO	ILMN_187197	ILMN_187197	LITAF	scl48756.9_28				9910577	NM_019980	Litaf		ILMN_2442008	000730215	S	20	GTGGAGGACTGCAAGATATAGATTACTTGGAGTAAATTGCCAGGTGCCCA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197059	ILMN_197059	EG238395	XM_138240.6	XM_138240.6		238395	94393122	XM_138240.6	EG238395	XP_138240.1	ILMN_1226074	002850176	S	1232	TGGGCAAGATCAACAACCCTGCACAAAACTAGAACTCCCCAAGGGGTGGG	12	+	105558029-105558060:105558061-105558078	12qE	PREDICTED: Mus musculus predicted gene, EG238395 (EG238395), mRNA.					
Mus musculus	RefSeq	ILMN_200155	ILMN_200155	LOC385821	XM_358958.1	XM_358958.1			38080724	XM_358958.1	LOC385821		ILMN_2537778	004670692	S	2	TGCTTCAATCCACAGACCCAGAGAAGCTAATAACAAGAAAAGCTCAAGGG										
Mus musculus	RefSeq	ILMN_214587	ILMN_214587	DNASE1	NM_010061.4	NM_010061.4		13419	47087133	NM_010061.4	Dnase1	NP_034191.2	ILMN_2734251	002630348	S	453	TGTTATCCAAGAGGTCAGAGACTCCCACCTGGTTGCTGTTGGGAAGCTCC	16	+	4037977-4038026	16qA1	Mus musculus deoxyribonuclease I (Dnase1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Catalysis of the endonucleolytic cleavage of DNA to 5'-phosphodinucleotide and 5'-phosphooligonucleotide end products [goid 4530] [evidence IEA]	DNaseI; MGC144446; AI788650; DNase I; MGC144447; Dnl1	DNaseI; MGC144446; AI788650; DNase I; MGC144447; Dnl1
Mus musculus	RefSeq	ILMN_197914	ILMN_241119	GPR113	NM_001014394.2	NM_001014394.2		381628	117553628	NM_001014394.2	Gpr113	NP_001014416.2	ILMN_2529810	002120075	S	402	TGGGGCCGCAGGTCAGAAAGAGATTCCTGTATGTGTCGCAGCTTCCACGG	5	-	30529531-30529580	5qB1	Mus musculus G protein-coupled receptor 113 (Gpr113), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Pgr23; Gm1041	Pgr23; Gm1041
Mus musculus	RefSeq	ILMN_199994	ILMN_241119	GPR113	NM_001014394.2	NM_001014394.2		381628	117553628	NM_001014394.2	Gpr113	NP_001014416.2	ILMN_2537217	001690026	S	2693	AGCCCTGCTTATTCTCACACCCATCTTTGGCCTCACTTGGGGACTGGGCG	5	-	30522843-30522892	5qB1	Mus musculus G protein-coupled receptor 113 (Gpr113), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Pgr23; Gm1041	Pgr23; Gm1041
Mus musculus	RefSeq	ILMN_241119	ILMN_241119	GPR113	NM_001014394.2	NM_001014394.2		381628	117553628	NM_001014394.2	Gpr113	NP_001014416.2	ILMN_2909568	005720373	S	2873	ATTGCGAGGCAGCCGGTCCTCTAACTCTGCCATCTCCATGGTCACAAATG	5	-	30521628-30521638:30522037-30522075	5qB1	Mus musculus G protein-coupled receptor 113 (Gpr113), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Pgr23; Gm1041	Pgr23; Gm1041
Mus musculus	RefSeq	ILMN_190882	ILMN_236952	TRAT1	NM_198297.3	NM_198297.3		77647	148747429	NM_198297.3	Trat1	NP_938039.2	ILMN_2652867	000780671	S	537	CATTCATGATGATCCCGCTAGACTGTTTGGGTTGATCCGTGCCAAGAGAG				16qB5	Mus musculus T cell receptor associated transmembrane adaptor 1 (Trat1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50862] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 51051] [evidence ISA]; Any process that stops, prevents, or reduces the rate of receptor recyling [goid 1920] [evidence ISA]		Tcrim; MGC129418; C030046M14Rik; Trim; MGC129419	Tcrim; MGC129418; C030046M14Rik; Trim; MGC129419
Mus musculus	RefSeq	ILMN_190882	ILMN_236952	TRAT1	NM_198297.3	NM_198297.3		77647	148747429	NM_198297.3	Trat1	NP_938039.2	ILMN_1229005	005700632	S	90	GGGCTTGGCTCTGGTTATATCGTTGATCTTCAATATTTCCCACTATGTAG				16qB5	Mus musculus T cell receptor associated transmembrane adaptor 1 (Trat1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50862] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 51051] [evidence ISA]; Any process that stops, prevents, or reduces the rate of receptor recyling [goid 1920] [evidence ISA]		Tcrim; MGC129418; C030046M14Rik; Trim; MGC129419	Tcrim; MGC129418; C030046M14Rik; Trim; MGC129419
Mus musculus	MEEBO	ILMN_209003	ILMN_209003	6030441H18RIK	scl31247.3.4_321	NM_177893.2			31342732	NM_177893.2	6030441H18Rik		ILMN_2591619	004830113	S	3086	GTTGTATGTAAAGCAACCACCCTCCTTGTCAGGCTTTGTTGGCCTCGAAC										
Mus musculus	RefSeq	ILMN_216018	ILMN_216018	SPAG1	NM_012031.1	NM_012031.1		26942	6755615	NM_012031.1	Spag1	NP_036161.1	ILMN_2955694	003060196	S	3282	GCAGTTGCGACTCCACCACTTTCTGTCCCACTCAAATGCACAAAATCCAC	15	+	36179846-36179895	15qB3.1	Mus musculus sperm associated antigen 1 (Spag1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	tpis	tpis
Mus musculus	RefSeq	ILMN_216018	ILMN_216018	SPAG1	NM_012031.1	NM_012031.1		26942	6755615	NM_012031.1	Spag1	NP_036161.1	ILMN_2666380	005550491	S	2876	CCGACGGTTTGACGGCAGAGGATGTACAGGCCCTAAGAAGGCAGTATGAG	15	+	36179440-36179487:36179488-36179489	15qB3.1	Mus musculus sperm associated antigen 1 (Spag1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	tpis	tpis
Mus musculus	RefSeq	ILMN_218372	ILMN_218372	CYP2D10	NM_010005.2	NM_010005.2		13101	31981815	NM_010005.2	Cyp2d10	NP_034135.2	ILMN_1229535	002690669	S	1468	CTTTAGCTTCTCAGTGCCCAATGGACAGCCCAGGCCTAGAAACCTTGGTG	15	-	82233392-82233441	15qE1	Mus musculus cytochrome P450, family 2, subfamily d, polypeptide 10 (Cyp2d10), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	AI303445; Cyp2d; P450-2D	AI303445; Cyp2d; P450-2D
Mus musculus	MEEBO	ILMN_184173	ILMN_184173	TRBV8_AE000663_T_CELL_RECEPTOR_BETA_VARIABLE_8_270	TRBV8_AE000663_T_cell_receptor_beta_variable_8_270						TRBV8_AE000663_T_cell_receptor_beta_variable_8_270		ILMN_2416460	006270259	S	18	GGAGTTGGCTACCCCCTCTCAGACATCAGTGTACTTCTGTGCCAGCGGTG										
Mus musculus	RefSeq	ILMN_221576	ILMN_221576	MOXD1	NM_021509.5	NM_021509.5		59012	146134988	NM_021509.5	Moxd1	NP_067484.2	ILMN_2737390	001240221	S	2505	CCAGTCTTTCTAGCACTGTCCAGCCGAATGTGTTTCTTACTCTACAACTC				10qA4	Mus musculus monooxygenase, DBH-like 1 (Moxd1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3,4-dihydroxyphenethylamine + ascorbate + O2 = noradrenaline + dehydroascorbate + H2O [goid 4500] [evidence IEA]	MNCb-5203; 3230402N08Rik	MNCb-5203; 3230402N08Rik
Mus musculus	RefSeq	ILMN_200453	ILMN_200453	LOC384298	XM_357552.1	XM_357552.1			38082010	XM_357552.1	LOC384298		ILMN_2538814	004150327	S	833	TGTTCTTCGTCCATTTTCTCAGATCCCAGATGAATCAGGTCCTAGGGTGC										
Mus musculus	RefSeq	ILMN_223278	ILMN_223278	HOXD9	NM_013555.2	NM_013555.2		15438	31542960	NM_013555.2	Hoxd9	NP_038583.1	ILMN_1216475	002650301	S	1495	TTTTTTTAGGTAGAAGTGACTGTGTGGTTGGTCTCTGTGAGTTATCTGGG	2	+	74537660-74537709	2qC3	Mus musculus homeo box D9 (Hoxd9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IGI]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 48935] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Hox-5.2; Hox-4.4	Hox-5.2; Hox-4.4
Mus musculus	RefSeq	ILMN_223278	ILMN_223278	HOXD9	NM_013555.2	NM_013555.2		15438	31542960	NM_013555.2	Hoxd9	NP_038583.1	ILMN_2800183	004810156	S	1735	GTCTCACCCTATCCAGCCTCCCAAACAGGGCCAACGATCTAATTCCGAGA	2	+	74537900-74537949	2qC3	Mus musculus homeo box D9 (Hoxd9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IGI]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 48935] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Hox-5.2; Hox-4.4	Hox-5.2; Hox-4.4
Mus musculus	RefSeq	ILMN_221187	ILMN_221187	NIT1	NM_012049.1	NM_012049.1		27045	6754855	NM_012049.1	Nit1	NP_036179.1	ILMN_2754027	004560739	S	1251	TCATGAAAACTGAAGTTATGCTGAGGGCTGAGCAGCACTGGCATTGAAAA	1	-	173272390-173272439	1qH3	Mus musculus nitrilase 1 (Nit1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]	W57327; ESTM30; AI255805	W57327; ESTM30; AI255805
Mus musculus	RefSeq	ILMN_195312	ILMN_221187	NIT1	NM_012049.1	NM_012049.1		27045	6754855	NM_012049.1	Nit1	NP_036179.1	ILMN_2514451	002650767	S	1291	CCAGTGCTGCTCAGCCCTCAGCATAACTTCAGTTTTCATGAAATAAACAG				1qH3	Mus musculus nitrilase 1 (Nit1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]	W57327; ESTM30; AI255805	W57327; ESTM30; AI255805
Mus musculus	RefSeq	ILMN_221187	ILMN_221187	NIT1	NM_012049.1	NM_012049.1		27045	6754855	NM_012049.1	Nit1	NP_036179.1	ILMN_2732145	007560300	S	1235	ATAGTCACTGTTTATTTCATGAAAACTGAAGTTATGCTGAGGGCTGAGCA	1	-	173272406-173272455	1qH3	Mus musculus nitrilase 1 (Nit1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]	W57327; ESTM30; AI255805	W57327; ESTM30; AI255805
Mus musculus	RefSeq	ILMN_210563	ILMN_210563	NAIP2	NM_010872.1	NM_010872.1		17948	6754789	NM_010872.1	Naip2	NP_035002.1	ILMN_2985497	006130543	S	4585	CTCTAGACAGGCATGGTGCAATCCTAGTACTTAGGAGCCTGAGCAGGGGG	13	-	100930192-100930241	13qD1	Mus musculus NLR family, apoptosis inhibitory protein 2 (Naip2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Birc1b; MGC141528; Naip2; Naip-rs6	Birc1b; MGC141528; Naip2; Naip-rs6
Mus musculus	RefSeq	ILMN_247909	ILMN_247909	PSMF1	NM_144889.2	NM_144889.2		228769	74136560	NM_144889.2	Psmf1	NP_659138.2	ILMN_3094023	001980168	A	3183	GAGGTAGTGCTCCAGTTTCTCTGTATCCTCACCAATCCTTGCTTGTACCC	2	-	151541871-151541920	2qG3	Mus musculus proteasome (prosome, macropain) inhibitor subunit 1 (Psmf1), transcript variant 2, mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			MGC18784; PI31; AW048666; BC012260	MGC18784; PI31; AW048666; BC012260
Mus musculus	MEEBO	ILMN_185752	ILMN_185752	LSM5	scl28966.2_89				42476201	NM_025520	Lsm5		ILMN_1257085	002070717	S	1	GACTTTGTCAGTATCCTTTTTAAAAGCGGGAATGGTGTAGGTTTCTAAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]		
Mus musculus	RefSeq	ILMN_199649	ILMN_199649	LOC382844	XM_356705.1	XM_356705.1			38075572	XM_356705.1	LOC382844		ILMN_2535988	004490577	S	184	GAAAGAATTCTGTTGGTGGTAGGTTGGGAGCACCTGCTGGGAGCACCTGC										
Mus musculus	RefSeq	ILMN_197751	ILMN_197751	LOC381006	XM_354916.1	XM_354916.1			38077796	XM_354916.1	LOC381006		ILMN_2529240	001410390	S	1598	TCGCGACCAGAGACTGTACTACCAGACCATGGAGGCCCTGGACCACATGT										
Mus musculus	RefSeq	ILMN_237724	ILMN_237724	2010321M09RIK	NM_001077631.1	NM_001077631.1		69882	117647252	NM_001077631.1	2010321M09Rik	NP_001071099.1	ILMN_3124226	002340743	A	2260	GGCAGCCAGGGCCGTCTAGCATCCAGAAAGCGACTCTTCATGTCTCAATT	9	+	64834152-64834201	9qC	Mus musculus RIKEN cDNA 2010321M09 gene (2010321M09Rik), transcript variant 2, mRNA.					
Mus musculus	MEEBO	ILMN_186942	ILMN_186942	SLC16A10	scl38033.8_150				30794381	NM_028247	Slc16a10		ILMN_2439813	000540689	S	7	TTCCCACGAGTAAGGGGGAGACTGTCACAGGCAAGCACGTCTGGAAATCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212986	ILMN_212986	GGCX	NM_019802.1	NM_019802.1		56316	9790008	NM_019802.1	Ggcx	NP_062776.1	ILMN_2933647	003140280	S	2740	GCTGGGATTAAAGGTGTGTGCCACCACGCCCCACTGGGCTTTTAGTTTTT	6	+	72360057-72360106	6qC1	Mus musculus gamma-glutamyl carboxylase (Ggcx), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase [goid 17187] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA];  [goid 8488] [evidence ISS]		
Mus musculus	RefSeq	ILMN_195719	ILMN_260666	ZFP36L2	NM_001001806.2	NM_001001806.2		12193	76253917	NM_001001806.2	Zfp36l2	NP_001001806.1	ILMN_2518062	007570743	S	1079	GGGGGCCTGGAGTCGCCGCTGCTGCTCGACAGCCCCACATCGCGCACGCC	17	-	84585672-84585721	17qE4	Mus musculus zinc finger protein 36, C3H type-like 2 (Zfp36l2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps: poly(A) tail shortening, deadenylylation-dependent decapping, and decay of the transcript body, and that can regulate mRNA stability [goid 288] [evidence IDA]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ERF2; Tis11d; Brf2	ERF2; Tis11d; Brf2
Mus musculus	Riken	ILMN_204101	ILMN_204101	A230033A17RIK	ri|A230033A17|PX00127O23|AK038545|2875					AK038545	A230033A17Rik		ILMN_1222963	006510433	S	2515	CTGGTGTTCCAGAGGTAGTTGGCCTTTCTGAGGGTGGCTGCCTTTAGCTA										
Mus musculus	Riken	ILMN_204698	ILMN_204698	A430031C20RIK	ri|A430031C20|PX00135I24|AK039924|783					AK039924	A430031C20Rik		ILMN_1216476	002710326	S	707	AACACGCTAATACCGAAAGGAGGCGATGATTCAATAGCTTCCAGCCTCCC										
Mus musculus	RefSeq	ILMN_241963	ILMN_241963	DEFB36	NM_001037247.1	NM_001037247.1		266620	84370315	NM_001037247.1	Defb36	NP_001032324.1	ILMN_2926781	003130075	S	293	GCCGAAGCCAAAGCCGTGGATGTTCTAACTGCCCAGAAGCCTGAAGCCCA	2	+	152304041-152304067:152304068-152304090	2qH1	Mus musculus defensin beta 36 (Defb36), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defb123	Defb123
Mus musculus	RefSeq	ILMN_226572	ILMN_226572	2310033K02RIK	NM_001080708.1	NM_001080708.1		69553	123959721	NM_001080708.1	2310033K02Rik	NP_001074177.1	ILMN_2946899	006250767	S	2776	TGACCTGGAGGCCGTGCGAGTTGCAGCGCGGGAAGCGACACTGTCATTTG	2	-	167806420-167806420:167806771-167806819	2qH3	Mus musculus RIKEN cDNA 2310033K02 gene (2310033K02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215761	ILMN_215761	OLFR1280	NM_146908.1	NM_146908.1		258910	22129074	NM_146908.1	Olfr1280	NP_667119.1	ILMN_1255579	001070685	S	624	AACTTGTTTCATACTTTTATTGATCTCTTACACTTATATTTTACTAACTG	2	+	111156261-111156310	2qE3	Mus musculus olfactory receptor 1280 (Olfr1280), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR248-1	MOR248-1
Mus musculus	RefSeq	ILMN_216200	ILMN_216200	NAT3	NM_008674.2	NM_008674.2		17962	31560667	NM_008674.2	Nat3	NP_032700.1	ILMN_2668398	003840164	S	1256	CATCTGTCCCCTACATTATGGTAAGAAAATCATAGACATCAAATAGCTCT	8	+	70072387-70072436	8qB3.3	Mus musculus N-acetyltransferase 3 (Nat3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [evidence IEA]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IEA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213502	ILMN_213502	SMARCAL1	NM_018817.1	NM_018817.1		54380	9055347	NM_018817.1	Smarcal1	NP_061287.1	ILMN_2843698	003440196	S	2657	CTGGGGGAAGCTGGGCTTTCTGAGACCAATTTCTCGGAAATGACGGAAGC	1	+	72642518-72642548:72642362-72642380	1qC3	Mus musculus Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 (Smarcal1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IDA]	6030401P21Rik; Mharp	6030401P21Rik; Mharp
Mus musculus	RefSeq	ILMN_231519	ILMN_231519	ZBTB8OS	NM_025970.1	NM_025970.1		67106	21746141	NM_025970.1	Zbtb8os	NP_080246.1	ILMN_2872419	005690528	S	257	CCCAAGGGGACGACCTGCAGTCTCTGCTGTTTCACTTTTTGGACGAGTGG	4	+	128843898-128843902:128844045-128844089	4qD2.2	Mus musculus zinc finger and BTB domain containing 8 opposite strand (Zbtb8os), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Arch; 2010001H09Rik; Archm; 2310028N13Rik; AI851226	Arch; 2010001H09Rik; Archm; 2310028N13Rik; AI851226
Mus musculus	Riken	ILMN_205278	ILMN_205278	7530428D23RIK	ri|7530428D23|PX00312O04|AK033061|560					AK033061	7530428D23Rik		ILMN_2571354	001850537	S	157	GGAAGTGGCACCTGTGGTCAGCAAGTCTGGGCAAAGTTCTGCTAGGTTAG										
Mus musculus	RefSeq	ILMN_186374	ILMN_244609	1810011O10RIK	NM_026931.2	NM_026931.2		69068	141802249	NM_026931.2	1810011O10Rik	NP_081207.1	ILMN_1254307	007100639	S	1028	GCCCAGTAAAACCCCACAGCATGGGCTATGTTTCTACAGGATTTGTACAC	8	-	25548341-25548390	8qA2	Mus musculus RIKEN cDNA 1810011O10 gene (1810011O10Rik), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		AW321058; AW121743; 1110065B09Rik	AW321058; AW121743; 1110065B09Rik
Mus musculus	Riken	ILMN_205250	ILMN_205250	E230012G14RIK	ri|E230012G14|PX00210G04|AK054015|2289					AK054015	E230012G14Rik		ILMN_1246919	006650762	S	2181	GACTAGGACTTTGGGGTTAGGAGGTCAGATATGGAAGGGGCATGGGGGGG										
Mus musculus	RefSeq	ILMN_222370	ILMN_222370	PPP3R1	NM_024459.2	NM_024459.2		19058	84794596	NM_024459.2	Ppp3r1	NP_077779.2	ILMN_2953411	002600754	S	2464	CAGCCAGTGGTTTGATCTGTCCCAGTGTCAACCGCCATGTGCTCTGCTTC	11	+	17100018-17100067	11qA2	Mus musculus protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) (Ppp3r1), mRNA.		The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MCIP1; Cnb1	MCIP1; Cnb1
Mus musculus	Riken	ILMN_207330	ILMN_207330	5730445E20RIK	ri|5730445E20|PX00644C06|AK077549|3271					AK077549	5730445E20Rik		ILMN_1234803	006450114	S	2740	AGAGGAACATGGTCATTTTGGGCTGACCCCTTAGGGGTTTTGTCCATCCC										
Mus musculus	RefSeq	ILMN_201137	ILMN_201137	LOC384847	XM_357897.1	XM_357897.1			38089395	XM_357897.1	LOC384847		ILMN_1225833	003390184	S	828	GAAAGCTGCTGGCAAAGGGGACATCCACGTAGATCCCATTGAGCTGGTGG										
Mus musculus	RefSeq	ILMN_191959	ILMN_250576	MUTYH	NM_133250.1	NM_133250.1		70603	18875427	NM_133250.1	Mutyh	NP_573513.1	ILMN_1220545	005820035	S	1258	CTGACGTATCAAGTATACAGTCTGGCTCTAGATCAAGCCCCAGCGAGCAC	4	+	116490520-116490569	4qD1	Mus musculus mutY homolog (E. coli) (Mutyh), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [evidence TAS]	Mutyhbeta; Mutyhc; Myh; Mutyhb; Mutyhalpha; 5730495A01Rik; Mutyha	Mutyhbeta; Mutyhc; Myh; Mutyhb; Mutyhalpha; 5730495A01Rik; Mutyha
Mus musculus	RefSeq	ILMN_191959	ILMN_250576	MUTYH	NM_133250.1	NM_133250.1		70603	18875427	NM_133250.1	Mutyh	NP_573513.1	ILMN_2590061	000050192	S	306	GGTGTCAGAGGTTATGCTGCAGCAGACCCAGGTTGCCACAGTGATCGACT	4	+	116488571-116488620	4qD1	Mus musculus mutY homolog (E. coli) (Mutyh), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [evidence TAS]	Mutyhbeta; Mutyhc; Myh; Mutyhb; Mutyhalpha; 5730495A01Rik; Mutyha	Mutyhbeta; Mutyhc; Myh; Mutyhb; Mutyhalpha; 5730495A01Rik; Mutyha
Mus musculus	RefSeq	ILMN_250576	ILMN_250576	MUTYH	NM_133250.1	NM_133250.1		70603	18875427	NM_133250.1	Mutyh	NP_573513.1	ILMN_2920924	006520615	S	1387	CGCATGTATGAGGACCATCGGCAAGGGACCCGCAAGGGTTCAAAAAGGTC	4	+	116490852-116490887:116491860-116491873	4qD1	Mus musculus mutY homolog (E. coli) (Mutyh), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [evidence TAS]	Mutyhbeta; Mutyhc; Myh; Mutyhb; Mutyhalpha; 5730495A01Rik; Mutyha	Mutyhbeta; Mutyhc; Myh; Mutyhb; Mutyhalpha; 5730495A01Rik; Mutyha
Mus musculus	MEEBO	ILMN_217709	ILMN_217709	FHL3	scl0002754.1_85				5825392	AF114382	Fhl3		ILMN_2686669	000110491	S	564	CTTCGTGCCTGACAAGGGTGCCCACTACTGCGTGCCTTGCTATGAGAACA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]		
Mus musculus	MEEBO	ILMN_218705	ILMN_218705	OLFR1412	scl17641.1.21_43				22129728	NM_146277	Olfr1412		ILMN_2699148	001430037	S	613	TGTTTGCCATCTGTGGTTTCATTCTAATGGGGGCAACATTAGTCATCCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212857	ILMN_331440	LOC100047238	XM_001477706.1	XM_001477706.1		100047238	149251795	XM_001477706.1	LOC100047238	XP_001477756.1	ILMN_1247967	000360670	S	845	CTAACTATGGAAATGACCGCCTCGGCTTGTACACCTTTGTGAACTTGGCC					PREDICTED: Mus musculus similar to N-deacetylase/N-sulfotransferase 4 (LOC100047238), mRNA.					
Mus musculus	MEEBO	ILMN_212472	ILMN_212472	MTNR1B	scl36198.4.199_23				25014089	NM_145712	Mtnr1b		ILMN_2770987	004050019	S	702	CAAGGCTGAGAGGAAGCTGCGTCTGAGACCGAGTGATTTGCGCAGTTTCC						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with melatonin, N-acetyl-5-methoxytryptamine, to initiate a change in cell activity. Melatonin is a neuroendocrine substance that stimulates the aggregation of melanosomes in melanophores, thus lightening the skin [goid 8502] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214220	ILMN_249564	4933433C11RIK	XM_922687.3	XM_922687.3		74472	149249112	XM_922687.3	4933433C11Rik	XP_927780.3	ILMN_1232047	005220364	S	1143	TCTGAACTGTGGTCTCTGGTGTGCCTGGTTGCCCATCCTTTGCCCAATGG				2qA3	PREDICTED: Mus musculus RIKEN cDNA 4933433C11 gene, transcript variant 4 (4933433C11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223723	ILMN_223723	RGL3	NM_023622.4	NM_023622.4		71746	146141143	NM_023622.4	Rgl3	NP_076111.2	ILMN_1239492	003780041	S	1702	TGTCTCCAGGTTCACCCCCATCCAGCCCTAGAAACCGAGAGCCTCCTCCT				9qA3	Mus musculus ral guanine nucleotide dissociation stimulator-like 3 (Rgl3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence TAS]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ral family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 8321] [evidence IDA]	mFLJ00153; 1300003D20Rik	mFLJ00153; 1300003D20Rik
Mus musculus	MEEBO	ILMN_188169	ILMN_188169	TMPRSS6	scl46991.17.2_22	NM_027902.1			27229128	NM_027902.1	Tmprss6		ILMN_2469310	005910707	S	12	AGGACACAAGTATTCTGGGGCAAGTGACCCTGCTAAGGCCTGTTTCCCTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence ISO]		
Mus musculus	RefSeq	ILMN_196587	ILMN_196587	CYP2A5	NM_007812.2	NM_007812.2		13087	75832128	NM_007812.2	Cyp2a5	NP_031838.2	ILMN_3159131	006350333	A	1466	CCACGATCCCACCAACCTACACTATGAGTTTCTTGTCCCGTTGAGCCTGG	7	+	26551777-26551819:26551820-26551826	7qA3	Mus musculus cytochrome P450, family 2, subfamily a, polypeptide 5 (Cyp2a5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	Coh; Cyp15a2	Coh; Cyp15a2
Mus musculus	RefSeq	ILMN_196587	ILMN_196587	CYP2A5	NM_007812.2	NM_007812.2		13087	75832128	NM_007812.2	Cyp2a5	NP_031838.2	ILMN_3079804	006350762	I	1886	CCAAGAGCTCAGGAACATTTGGACAAAGATCTGTGTGCTTTGGCCTTGGG	7	+	26552197-26552246	7qA3	Mus musculus cytochrome P450, family 2, subfamily a, polypeptide 5 (Cyp2a5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	Coh; Cyp15a2	Coh; Cyp15a2
Mus musculus	RefSeq	ILMN_213700	ILMN_213700	BET1L	NM_018742.4	NM_018742.4		54399	142344115	NM_018742.4	Bet1l	NP_061212.2	ILMN_2639819	007000333	S	1171	GGGAGCTTTTGACCTTGTACTGAACCTTGCCCTACCCTGTACAGCCAGTC	7	-	148039498-148039547	7qF5	Mus musculus blocked early in transport 1 homolog (S. cerevisiae)-like (Bet1l), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IDA]	Gs15; 2610021K23Rik	Gs15; 2610021K23Rik
Mus musculus	MEEBO	ILMN_184248	ILMN_184248	AW547186	scl54573.1.37_14				31341086	NM_177592	AW547186		ILMN_2684002	006180193	S	2162	AAGGAATGATTAGCTAGATATTAAACATATTCCCATGATAATCACTAAGA										
Mus musculus	RefSeq	ILMN_219290	ILMN_219290	CMTM1	NM_181990.1	NM_181990.1		353509	32526866	NM_181990.1	Cmtm1	NP_871790.1	ILMN_2809355	003140672	S	1189	CTACATGTATAATCACTCCCACCAGGCCATCACGGAGCTCCCATGCCCAC	8	-	107181852-107181901		Mus musculus CKLF-like MARVEL transmembrane domain containing 1 (Cmtm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CHLFH1a; CKLFH; Cklfsf1; CKLFH1	CHLFH1a; CKLFH; Cklfsf1; CKLFH1
Mus musculus	RefSeq	ILMN_218277	ILMN_218277	TIMM13	NM_013895.2	NM_013895.2		30055	31980717	NM_013895.2	Timm13	NP_038923.1	ILMN_2693839	003840541	S	940	CTGGAGACTCGTGGCTTTGACAGAGGTTCTGAGCCAGTAGGAGAAAGGAC	10	-	80302611-80302660	10qC1	Mus musculus translocase of inner mitochondrial membrane 13 homolog (yeast) (Timm13), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			Tim9; D10Ertd378e; Timm9	Tim9; D10Ertd378e; Timm9
Mus musculus	RefSeq	ILMN_219263	ILMN_219263	A430005L14RIK	NM_175287.3	NM_175287.3		97159	141802941	NM_175287.3	A430005L14Rik	NP_780496.1	ILMN_2758300	006480441	S	821	ACGCTCTGAGAACAAGGTGGACATCAGTGTCACTGGCTGGCACAGACGCC	4	+	153335757-153335806	4qE2	Mus musculus RIKEN cDNA A430005L14 gene (A430005L14Rik), mRNA.				RP23-254N4.1; C79672	RP23-254N4.1; C79672
Mus musculus	RefSeq	ILMN_219263	ILMN_219263	A430005L14RIK	NM_175287.3	NM_175287.3		97159	141802941	NM_175287.3	A430005L14Rik	NP_780496.1	ILMN_1257788	006580438	S	26	CGCGATTGAGACTTGGCGGAGGAGCGTTAGGCCGGGGCGCTCACTCATGA	4	+	153331371-153331416:153331417-153331420	4qE2	Mus musculus RIKEN cDNA A430005L14 gene (A430005L14Rik), mRNA.				RP23-254N4.1; C79672	RP23-254N4.1; C79672
Mus musculus	RefSeq	ILMN_219263	ILMN_219263	A430005L14RIK	NM_175287.3	NM_175287.3		97159	141802941	NM_175287.3	A430005L14Rik	NP_780496.1	ILMN_2706421	006130458	S	21	AGCCGCGCGATTGAGACTTGGCGGAGGAGCGTTAGGCCGGGGCGCTCACT	4	+	153331366-153331415	4qE2	Mus musculus RIKEN cDNA A430005L14 gene (A430005L14Rik), mRNA.				RP23-254N4.1; C79672	RP23-254N4.1; C79672
Mus musculus	RefSeq	ILMN_201287	ILMN_201287	LOC382371	XM_356468.1	XM_356468.1			38090526	XM_356468.1	LOC382371		ILMN_1246854	004920181	S	527	AACACAGCAAGGACGAGAAGGTGTCCGAAGGCCAGGATTGCTTTCTCCGC										
Mus musculus	RefSeq	ILMN_195761	ILMN_259112	IRAK1	NM_008363.2	NM_008363.2		16179	117606336	NM_008363.2	Irak1	NP_032389.2	ILMN_2525513	006330678	S	2559	CCTAAGGAATTGGGTAGTACAAAACAGAAGACTGGGGCTGGTGAGATGGC	X	-	71265045-71265090:71265239-71265242	XqA7.3	Mus musculus interleukin-1 receptor-associated kinase 1 (Irak1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 16831874] [evidence IEP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IPI]	mPLK; AA408924; Plpk; IRAK; Il1rak; IRAK-1	mPLK; AA408924; Plpk; IRAK; Il1rak; IRAK-1
Mus musculus	RefSeq	ILMN_195761	ILMN_259112	IRAK1	NM_008363.2	NM_008363.2		16179	117606336	NM_008363.2	Irak1	NP_032389.2	ILMN_2615766	006330546	S	2474	CAGACAGGGCCAGCCAAAGAACTTGATAGAAGCTGATAAGGCAGGCAATG	X	-	71265278-71265304:71265667-71265689	XqA7.3	Mus musculus interleukin-1 receptor-associated kinase 1 (Irak1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 16831874] [evidence IEP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IPI]	mPLK; AA408924; Plpk; IRAK; Il1rak; IRAK-1	mPLK; AA408924; Plpk; IRAK; Il1rak; IRAK-1
Mus musculus	RefSeq	ILMN_195761	ILMN_259112	IRAK1	NM_008363.2	NM_008363.2		16179	117606336	NM_008363.2	Irak1	NP_032389.2	ILMN_2518457	007650446	S	3506	TAATGCTTTATATCTCTGGGCTCTTAAGTGTCCACCCAAAACTCAGGCCC	X	-	71262488-71262537	XqA7.3	Mus musculus interleukin-1 receptor-associated kinase 1 (Irak1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 16831874] [evidence IEP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IPI]	mPLK; AA408924; Plpk; IRAK; Il1rak; IRAK-1	mPLK; AA408924; Plpk; IRAK; Il1rak; IRAK-1
Mus musculus	MEEBO	ILMN_188971	ILMN_188971	SLC22A6	scl53417.10_59				31982136	NM_008766	Slc22a6		ILMN_2457246	001090446	S	5	CACCTCATCATTCCAGGTTCCACACAGGCTTTTAGTCCAAAGCCCTTCCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISS]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IDA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISA]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IDA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISS]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199189	ILMN_199189	LOC237856	XM_111050.2	XM_111050.2			28511259	XM_111050.2	LOC237856		ILMN_2534363	004280332	S	875	GGGATGATGGAGGCGACTGCAGTGACCACGACTTCGAGATGGTGGATTTG										
Mus musculus	Riken	ILMN_201860	ILMN_201860	6330408J11RIK	ri|6330408J11|PX00008G20|AK018143|2199					AK018143	6330408J11Rik		ILMN_2545156	000020181	S	2108	AGTGGGAGGGAGAGAACTGACTCCTGCAACTTGTCCTCTGACTGTCACAC										
Mus musculus	RefSeq	ILMN_213306	ILMN_196785	H2AFY2	NM_207000.2	NM_207000.2		404634	133892300	NM_207000.2	H2afy2	NP_996883.1	ILMN_1223837	004890386	S	1358	CCCATGCCCCGTCACCCTTCTGCAATCCTTGTAAAAAATAAAACCCCCGC	10	-	61201897-61201946	10qB4	Mus musculus H2A histone family, member Y2 (H2afy2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1740] [evidence ISA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Compensating for the two-fold variation in X:autosome chromosome ratios between sexes by a global activation or inactivation of all, or most of, genes on one or both of the X chromosomes [goid 7549] [evidence ISA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC130228; macroH2A2; MGC130227	MGC130228; macroH2A2; MGC130227
Mus musculus	RefSeq	ILMN_196785	ILMN_196785	H2AFY2	NM_207000.2	NM_207000.2		404634	133892300	NM_207000.2	H2afy2	NP_996883.1	ILMN_2525799	000270301	S	181	TCCCGGTCAGCCAGGGCCGGCGTCATCTTTCCAGTAGGCCGGTTGATGCG	10	-	61220554-61220603	10qB4	Mus musculus H2A histone family, member Y2 (H2afy2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1740] [evidence ISA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Compensating for the two-fold variation in X:autosome chromosome ratios between sexes by a global activation or inactivation of all, or most of, genes on one or both of the X chromosomes [goid 7549] [evidence ISA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC130228; macroH2A2; MGC130227	MGC130228; macroH2A2; MGC130227
Mus musculus	RefSeq	ILMN_212163	ILMN_212163	REG4	NM_026328.1	NM_026328.1		67709	13385823	NM_026328.1	Reg4	NP_080604.1	ILMN_2623499	006770598	S	617	CTTCCTGTGCAAGTATAAGACATAGAGCAAAAATCAAGCGTCTACCAGCC	3	+	98040264-98040288:98040289-98040313	3qF2.2	Mus musculus regenerating islet-derived family, member 4 (Reg4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	GISP; 2010002L15Rik; RELP	GISP; 2010002L15Rik; RELP
Mus musculus	RefSeq	ILMN_197008	ILMN_252389	KCNT2	NM_001081027.1	NM_001081027.1		240776	124486635	NM_001081027.1	Kcnt2	NP_001074496.1	ILMN_1246486	001990242	S	2972	AAGATGTCAAAGACCCAGGGCACCACCGCAGCCTTCACCGCAACTCAACG	1	+	142480636-142480685	1qF	Mus musculus potassium channel, subfamily T, member 2 (Kcnt2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence ISO]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence ISO]	E330038N15Rik; Slick	E330038N15Rik; Slick
Mus musculus	RefSeq	ILMN_206294	ILMN_315689	LOC100048272	XM_001479957.1	XM_001479957.1		100048272	149251908	XM_001479957.1	LOC100048272	XP_001480007.1	ILMN_1213521	001190132	S	314	GGGACCCATGTGAGCGAGTGGGCTGGGTGTAAGCTGATGGAAACCACTAC					PREDICTED: Mus musculus hypothetical protein LOC100048272 (LOC100048272), mRNA.					
Mus musculus	MEEBO	ILMN_193477	ILMN_193477	6230400G14RIK	scl28675.1.1_200						6230400G14Rik		ILMN_2497575	000380465	S	20	GTCAAGCTGTTTGTTAGGAAGGCCTGTCACAGGCTTTTGGCGTGGGTTCT										
Mus musculus	RefSeq	ILMN_191418	ILMN_191418	TULP2	NM_008807.2	NM_008807.2		56734	113930721	NM_008807.2	Tulp2	NP_032833.2	ILMN_1256080	004780026	S	1669	CTCTTTGCCCGCTCCAAGCCTTCGCCATCTGCTTATCCAGTTTCGATGGG	7	+	52777659-52777708	7qB4	Mus musculus tubby-like protein 2 (Tulp2), transcript variant 1, mRNA.			Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group [goid 8081] [evidence ISS]	MGC107290; Pdet	MGC107290; Pdet
Mus musculus	RefSeq	ILMN_185926	ILMN_191418	TULP2	NM_008807.2	NM_008807.2		56734	113930721	NM_008807.2	Tulp2	NP_032833.2	ILMN_1254263	007510100	S	220	TTCAGGCCAATCCTGATGCTACCCTGAGGCACCGGCGACCAAGGCGCGGG	7	+	52770840-52770889	7qB4	Mus musculus tubby-like protein 2 (Tulp2), transcript variant 1, mRNA.			Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group [goid 8081] [evidence ISS]	MGC107290; Pdet	MGC107290; Pdet
Mus musculus	RefSeq	ILMN_219761	ILMN_219761	PRLHR	NM_201615.1	NM_201615.1		226278	42476093	NM_201615.1	Prlhr	NP_963909.1	ILMN_2935636	001010053	S	1225	CGCAAGATGCTGCTGTCCTGGCCCCGCAAGATTGTGCCTCATGGCCAGAA	19	-	60542933-60542982	19qD3	Mus musculus prolactin releasing hormone receptor (Prlhr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IDA]	Gm339; GR3; PrRPR; Gpr10	Gm339; GR3; PrRPR; Gpr10
Mus musculus	RefSeq	ILMN_210604	ILMN_210604	GALNTL5	NM_026449.2	NM_026449.2		67909	142361629	NM_026449.2	Galntl5	NP_080725.1	ILMN_1248479	007150053	S	1356	CCTGTGGAAATATTAGTGAGCGCGTGGAATTAAGGAAACGCCTGGGTTGC	5	+	24725864-24725913	5qA3	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 (Galntl5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	1700021B12Rik; Galnt15	1700021B12Rik; Galnt15
Mus musculus	RefSeq	ILMN_211299	ILMN_211299	SLC45A2	NM_053077.2	NM_053077.2		22293	31560009	NM_053077.2	Slc45a2	NP_444307.1	ILMN_2985987	000780367	S	2897	TGACTCCAGATGTGCCTGAGCCATGCAGAAAGGAAATTTGTCCATGTGCC	15	+	10973872-10973921	15qA1	Mus musculus solute carrier family 45, member 2 (Slc45a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]		uw; Aim-1; Aim1; bls; blanc-sale; Dbr; Matp	uw; Aim-1; Aim1; bls; blanc-sale; Dbr; Matp
Mus musculus	Riken	ILMN_204301	ILMN_204301	A830091E24RIK	ri|A830091E24|PX00156O10|AK044111|3018					AK044111	A830091E24Rik		ILMN_1227314	006590095	S	2771	TCACTTGAGGGATGCAGTGTGAGGTCAGTCGCTGCGTAAAGAGGCAGGCC										
Mus musculus	RefSeq	ILMN_227206	ILMN_227206	NBL1	NM_008675.1	NM_008675.1		17965	6679017	NM_008675.1	Nbl1	NP_032701.1	ILMN_2886618	003850255	S	1562	CCGGCCCGTGGCTGTTCGACGAGAGCCTTAGAGCTTGTAACTAGTAGCCA	4	-	138638252-138638301	4qD3	Mus musculus neuroblastoma, suppression of tumorigenicity 1 (Nbl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		Dana; D4H1S1733E; NO3; MGC123430; DAN	Dana; D4H1S1733E; NO3; MGC123430; DAN
Mus musculus	Riken	ILMN_206225	ILMN_206225	D130079A10RIK	ri|D130079A10|PX00186J10|AK084043|1553					AK084043	D130079A10Rik		ILMN_1244190	002970471	S	1225	CCCCCCTTGAGGACTCGTTCATATTTTCAGCATAGCCCATGCCTGTGGTC										
Mus musculus	RefSeq	ILMN_215630	ILMN_215630	NAP1L3	NM_138742.1	NM_138742.1		54561	20270268	NM_138742.1	Nap1l3	NP_620081.1	ILMN_1217839	001780204	S	2415	GCCCAGAAGACTAAAGACTTAAATCTGCTTGCACTAGATGTGCCTTCATT	X	-	119508530-119508579	XqE3	Mus musculus nucleosome assembly protein 1-like 3 (Nap1l3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		MB20	MB20
Mus musculus	RefSeq	ILMN_219502	ILMN_219502	OLFR410	NM_146707.1	NM_146707.1		258702	22129426	NM_146707.1	Olfr410	NP_666918.1	ILMN_1225411	000110136	S	766	GGTGCTGGCATCTTTAACTACATGAGACTTGGTTCCACCAAACTTTCAGA	11	-	74147916-74147965	11qB5	Mus musculus olfactory receptor 410 (Olfr410), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR255-5; RP23-20M18.12	MOR255-5; RP23-20M18.12
Mus musculus	RefSeq	ILMN_216553	ILMN_315909	LOC666661	XM_001475933.1	XM_001475933.1		666661	149266966	XM_001475933.1	LOC666661	XP_001475983.1	ILMN_1244198	005560152	S	1460	GCTGAGGCTCACCAGGTCAACTGAGCTGTCAATCTTTCCATGGCTTTGTT				15qE1	PREDICTED: Mus musculus apolipoprotein L, 3-like (LOC666661), mRNA.					
Mus musculus	RefSeq	ILMN_188900	ILMN_259726	LYSMD4	NM_175215.3	NM_175215.3		75099	142384938	NM_175215.3	Lysmd4	NP_780424.1	ILMN_2701435	002490427	S	2634	ATAGCCCTGCGTGGGTTCCTAAGTAAAAGGTGACAAGGGATCTGCAGTGT	7	+	74373078-74373127	7qC	Mus musculus LysM, putative peptidoglycan-binding, domain containing 4 (Lysmd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		4930506D23Rik	4930506D23Rik
Mus musculus	RefSeq	ILMN_215466	ILMN_215466	NXPH1	NM_008751.2	NM_008751.2		18231	45598385	NM_008751.2	Nxph1	NP_032777.2	ILMN_2659896	004480343	S	1945	ACATGTGGGCGGACAGCTTATCTTGCCTATCACCGGACCTTTGCAATGCT	6	+	9198536-9198585	6qA1	Mus musculus neurexophilin 1 (Nxph1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]	C130005L03Rik	C130005L03Rik
Mus musculus	RefSeq	ILMN_216874	ILMN_216874	AGFG2	NM_145566.1	NM_145566.1		231801	21704137	NM_145566.1	Agfg2	NP_663541.1	ILMN_1215544	001570632	S	992	TATTTGGTAGTCTAGCTATAAAACGTATCAGTGGGGGCTCCCAGCAACTC	5	-	138104493-138104542	5qG2	Mus musculus ArfGAP with FG repeats 2 (Agfg2), transcript variant 1, mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	RABR; MGC7148; A630095P14Rik; MGC61203	RABR; MGC7148; A630095P14Rik; MGC61203
Mus musculus	RefSeq	ILMN_253321	ILMN_253321	FBXL6	NM_013909.1	NM_013909.1		30840	7305044	NM_013909.1	Fbxl6	NP_038937.1	ILMN_2935032	004200427	S	1491	GCTGCTGTATCTTAACCTGGAGTCCTGTCGTTGCCTCCCCCGAGGTCTGA	15	-	76366320-76366369	15qD3	Mus musculus F-box and leucine-rich repeat protein 6 (Fbxl6), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Fbl6; AU021795	Fbl6; AU021795
Mus musculus	RefSeq	ILMN_209430	ILMN_253321	FBXL6	NM_013909.1	NM_013909.1		30840	7305044	NM_013909.1	Fbxl6	NP_038937.1	ILMN_1216206	005090397	S	1166	TTCGAGGCTGCGCTAGGGTCACTCCTAGCGGTCTGTGTCATCTGCCATGT	15	-	76367007-76367056	15qD3	Mus musculus F-box and leucine-rich repeat protein 6 (Fbxl6), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Fbl6; AU021795	Fbl6; AU021795
Mus musculus	RefSeq	ILMN_196696	ILMN_320061	LOC100045488	XM_001474386.1	XM_001474386.1		100045488	149257115	XM_001474386.1	LOC100045488	XP_001474436.1	ILMN_1249151	006980068	S	2037	ACCTTTCCACAGCCCAGTTATCTTCGAATACATGAAAGAACACATACGGG					PREDICTED: Mus musculus similar to crooked legs CG14938-PB (LOC100045488), mRNA.					
Mus musculus	RefSeq	ILMN_215647	ILMN_215647	GM2A	NM_010299.2	NM_010299.2		14667	31560810	NM_010299.2	Gm2a	NP_034429.1	ILMN_2661971	000010768	S	1671	CAATCTCAAGTTATCTGGCCGCATCTCTTCCCCCTTCAAGGTCAAGTCCT	11	+	54924077-54924126	11qB1.3	Mus musculus GM2 ganglioside activator protein (Gm2a), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9313] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of ganglioside, a ceramide oligosaccharide carrying, in addition to other sugar residues, one or more sialic residues [goid 6689] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]	Increases the activity of an enzyme [goid 8047] [evidence IDA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IMP]	AW215435; AA408702	AW215435; AA408702
Mus musculus	Riken	ILMN_205307	ILMN_205307	LY108	ri|5830407F18|PX00038K22|AK030802|2919					AK030802	Ly108		ILMN_1244491	006840646	S	2478	GGAACTAGGAACAGAAGGGGGTTATCAGAAACAGCTCTTTAGCCCTCTCC										
Mus musculus	RefSeq	ILMN_215283	ILMN_215283	CNTNAP1	NM_016782.2	NM_016782.2		53321	116063559	NM_016782.2	Cntnap1	NP_058062.2	ILMN_2657583	003450537	S	4429	AAGTTTGGTGCGCAGAGCTACAGATGGGACCAAAGGGAGTGGCCGAGCCT	11	+	101051103-101051152	11qD	Mus musculus contactin associated protein-like 1 (Cntnap1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An axon part that is located adjacent to the nodes of Ranvier and surrounded by lateral loop portions of myelin sheath [goid 33270] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	Caspr; p190; NCP1; Nrxn4	Caspr; p190; NCP1; Nrxn4
Mus musculus	MEEBO	ILMN_194286	ILMN_194286	POGK	scl15991.5_15				31340927	NM_175170	Pogk		ILMN_2505047	004900709	S	20	TCCCATACCATCACTATCAGCTAAGATGCCTTACAGGCTATGTAGCACTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190009	ILMN_190009	ZFPN1A1	scl41831.10_341				6677650	NM_009578	Zfpn1a1		ILMN_1256645	005810048	S	19	GTACAGCCACCCAAACCCAGGAAGCTCATGTGCATCTGGTGCTATGGCAC										
Mus musculus	MEEBO	ILMN_190009	ILMN_190009	ZFPN1A1	scl41831.10_341				6677650	NM_009578	Zfpn1a1		ILMN_1255419	004640592	S	1	GACCCACAGCGGACAATGTGGGAGTGGATTTGCAGGCAGCATTTGTTCTT										
Mus musculus	RefSeq	ILMN_217852	ILMN_217852	OLFR661	NM_146748.1	NM_146748.1		258743	22128636	NM_146748.1	Olfr661	NP_666959.1	ILMN_2688387	004860368	S	609	CAACCAGCTCTTCCTGGCTTGGACACTCATGGGGAGTGACCTTGCTTTGA	7	+	111837139-111837188	7qE3	Mus musculus olfactory receptor 661 (Olfr661), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR40-4	MOR40-4
Mus musculus	RefSeq	ILMN_210516	ILMN_210516	ST18	NM_173868.1	NM_173868.1		240690	35215306	NM_173868.1	St18	NP_776293.1	ILMN_2606404	003520736	S	5791	CATTGCAACAAAATTGTGTTCAGTGCTGTGCATTTGGTGTATGGTAGGAA	1	+	6850950-6850999	1qA1	Mus musculus suppression of tumorigenicity 18 (St18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISA]	NZF-3; mKIAA0535; AV348974	NZF-3; mKIAA0535; AV348974
Mus musculus	RefSeq	ILMN_255437	ILMN_255437	TUBA1A	NM_011653.1	NM_011653.1		22142	6755900	NM_011653.1	Tuba1a	NP_035783.1	ILMN_2916705	003780619	S	696	CCTCGACATTGAGCGCCCAACCTACACTAACCTAAACAGGTTGATAGGCC	15	-	98778726-98778775	15qF1	Mus musculus tubulin, alpha 1A (Tuba1a), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC102098; Tuba1; MGC102097; Tuba-1; MGC102099	MGC102098; Tuba1; MGC102097; Tuba-1; MGC102099
Mus musculus	RefSeq	ILMN_212761	ILMN_212761	HDHD2	NM_029826.2	NM_029826.2		76987	85861227	NM_029826.2	Hdhd2	NP_084102.1	ILMN_2745240	000670113	S	548	CCTTGGGACCAGGACCATTTGTGACTGCCTTAGAGTATGCCACAGACACG	18	+	77203861-77203910	18qE3	Mus musculus haloacid dehalogenase-like hydrolase domain containing 2 (Hdhd2), transcript variant 1, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	3110052N05Rik; 0610039H12Rik	3110052N05Rik; 0610039H12Rik
Mus musculus	RefSeq	ILMN_212761	ILMN_212761	HDHD2	NM_029826.2	NM_029826.2		76987	85861227	NM_029826.2	Hdhd2	NP_084102.1	ILMN_3112837	001090400	A	309	GACAGCAGCCCGAAACTTAATCGAGCAGAAGCAAGTCAGGCCCATGCTCC	18	+	77193843-77193892	18qE3	Mus musculus haloacid dehalogenase-like hydrolase domain containing 2 (Hdhd2), transcript variant 1, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	3110052N05Rik; 0610039H12Rik	3110052N05Rik; 0610039H12Rik
Mus musculus	RefSeq	ILMN_205821	ILMN_225441	PHF20L1	XM_989972.1	XM_989972.1		239510	94399522	XM_989972.1	Phf20l1	XP_995066.1	ILMN_1242164	000940376	S	3353	CCCAGTAGTGTGGAAGTAGAGACATAAGGTCTCCCTGGGCTTTGCTGGCC				15qD2	PREDICTED: Mus musculus PHD finger protein 20-like 1, transcript variant 7 (Phf20l1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_202887	ILMN_258096	GALNTL2	NM_030166.1	NM_030166.1		78754	58000466	NM_030166.1	Galntl2	NP_084442.1	ILMN_1239386	004760204	S	4115	GCCCCTACTTAGGGAAGAGTTTTAGCCACCATCTTCTTGCTTCGGACTGG	14	+	30888995-30889044	14qB	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2 (Galntl2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	4631401E18Rik; mpp-GalNAc-T15	4631401E18Rik; mpp-GalNAc-T15
Mus musculus	RefSeq	ILMN_204628	ILMN_258096	GALNTL2	NM_030166.1	NM_030166.1		78754	58000466	NM_030166.1	Galntl2	NP_084442.1	ILMN_1244612	006650333	S	4363	GTGTTGTGTGTGTTCTGGTGATTAACAAACAGACCCAGATGGCTCACTGC	14	+	30889243-30889292	14qB	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2 (Galntl2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	4631401E18Rik; mpp-GalNAc-T15	4631401E18Rik; mpp-GalNAc-T15
Mus musculus	RefSeq	ILMN_258096	ILMN_258096	GALNTL2	NM_030166.1	NM_030166.1		78754	58000466	NM_030166.1	Galntl2	NP_084442.1	ILMN_2980157	003840156	S	5978	CTGAGTTGGGAAACGGAGGGGGCAAAAATCTGGGCAGGCTGGGTGAACAC	14	+	30890858-30890907	14qB	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2 (Galntl2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	4631401E18Rik; mpp-GalNAc-T15	4631401E18Rik; mpp-GalNAc-T15
Mus musculus	MEEBO	ILMN_186971	ILMN_186971	SCL0001533.1_63	scl0001533.1_63	AF390178.1			14573640	AF390178.1	scl0001533.1_63		ILMN_2440059	006100553	S	13	TCCGGTGTACGTACTGTTATTCTGCATCTGACCCCCAGAGTTCTGGCGTC										
Mus musculus	Riken	ILMN_206662	ILMN_206662	A430002G09RIK	ri|A430002G09|PX00134O06|AK079670|2017					AK079670	A430002G09Rik		ILMN_1237949	000430291	S	1920	CACAGACACACTGGAAACACAGCGCTTACACTCAACAGGGGGTCACGGGC										
Mus musculus	RefSeq	ILMN_256951	ILMN_256951	8030451F13RIK	NM_175418.3	NM_175418.3		109272	40254302	NM_175418.3	8030451F13Rik	NP_780627.2	ILMN_2969105	005910437	S	3333	CAAGGAGTCTGTACCCTGGAGATCCGCAAGCCTAGTCCTTATGACGGAGG	10	-	87985779-87985828	10qC1	Mus musculus RIKEN cDNA 8030451F13 gene (8030451F13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221703	ILMN_256951	8030451F13RIK	NM_175418.3	NM_175418.3		109272	40254302	NM_175418.3	8030451F13Rik	NP_780627.2	ILMN_2744469	006100403	S	3519	CCTGCAAGGCGTGCCTCCAAACATAATTGATTCCTATTTGCGAGACTTAC	10	-	87981239-87981288	10qC1	Mus musculus RIKEN cDNA 8030451F13 gene (8030451F13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221703	ILMN_256951	8030451F13RIK	NM_175418.3	NM_175418.3		109272	40254302	NM_175418.3	8030451F13Rik	NP_780627.2	ILMN_2739266	005670735	S	720	GTGTGGGAGCTGCTGAAAAATGCCAACCCCAACGAATACGAGAAGATCGC	10	-	88023048-88023097	10qC1	Mus musculus RIKEN cDNA 8030451F13 gene (8030451F13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210301	ILMN_210301	ITGB6	NM_021359.2	NM_021359.2		16420	31543008	NM_021359.2	Itgb6	NP_067334.1	ILMN_2805375	002760066	S	4579	GTTCTTTCTCTAATTACCGTTTTGACCCAAGGCAGGACCTTGAAAGAGCC	2	-	60436476-60436525	2qC1.2	Mus musculus integrin beta 6 (Itgb6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4831415H04Rik; 2210409C20Rik	4831415H04Rik; 2210409C20Rik
Mus musculus	RefSeq	ILMN_210301	ILMN_210301	ITGB6	NM_021359.2	NM_021359.2		16420	31543008	NM_021359.2	Itgb6	NP_067334.1	ILMN_2604243	002570139	S	4088	CTGACACAAAACAATTAGCACCTAGGCCCCCGGAATGTGGACCGGTTGCT	2	-	60436967-60437016	2qC1.2	Mus musculus integrin beta 6 (Itgb6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4831415H04Rik; 2210409C20Rik	4831415H04Rik; 2210409C20Rik
Mus musculus	RefSeq	ILMN_210301	ILMN_210301	ITGB6	NM_021359.2	NM_021359.2		16420	31543008	NM_021359.2	Itgb6	NP_067334.1	ILMN_2805372	004830674	S	4455	CACTCCCAGTGATGTGGTGAGACTGCTGAGGATACACGGGGCTGTTTGTG	2	-	60436600-60436649	2qC1.2	Mus musculus integrin beta 6 (Itgb6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4831415H04Rik; 2210409C20Rik	4831415H04Rik; 2210409C20Rik
Mus musculus	MEEBO	ILMN_189046	ILMN_189046	MOBK1B	scl29838.9_30				21704147	NM_145571	Mobk1b		ILMN_2457878	006350669	S	15	CTTTTGTTTAAATATGGAAATGAGATTTTTGATTAAATTTGGAGAGTTGT										
Mus musculus	MEEBO	ILMN_189046	ILMN_189046	MOBK1B	scl29838.9_30				21704147	NM_145571	Mobk1b		ILMN_1230545	003870273	S	3164	TTGCAGTGGCTTCCAATTGCCTGGAGAATTCTGCTTTAGCCCTGTGGTGC										
Mus musculus	Riken	ILMN_202789	ILMN_202789	4933409A11RIK	ri|4933409A11|PX00020C05|AK030172|2345					AK030172	4933409A11Rik		ILMN_1233090	002060356	S	2212	GAGAGCTGCCTCTGTGTCTGCCGTGTCTGGTGGAGTCTTTGGATGCACTC										
Mus musculus	Riken	ILMN_203339	ILMN_203339	4833426D18RIK	ri|4833426D18|PX00028E14|AK029387|2203					AK029387	4833426D18Rik		ILMN_2556551	003140072	S	1884	GGGAAGCTTTGGTTCAGTGTTCTCTTGGCAATGAGAGGATTTCCCCCCTC										
Mus musculus	RefSeq	ILMN_193786	ILMN_247014	AI314180	NM_172381.2	NM_172381.2		230249	37718969	NM_172381.2	AI314180	NP_759013.2	ILMN_1249363	005310286	S	5679	GGAGACAGACAACAGACCAGAGCTGCAGGAGAAAGCCTCAGTATTGAAGA	4	-	58813075-58813124	4qB3	Mus musculus expressed sequence AI314180 (AI314180), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW558785; KIAA0368; BB181316; RP23-211P15.1; mKIAA0368	AW558785; KIAA0368; BB181316; RP23-211P15.1; mKIAA0368
Mus musculus	RefSeq	ILMN_194730	ILMN_257216	HSF1	NM_008296.2	NM_008296.2		15499	118130831	NM_008296.2	Hsf1	NP_032322.1	ILMN_1255216	006510689	S	1888	GGTCTACTCTCTGGTCACAGCTTCACAGCCACACTTGGACTGACCCTGCA	15	+	76331272-76331321	15qD3	Mus musculus heat shock factor 1 (Hsf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AA960185	AA960185
Mus musculus	RefSeq	ILMN_201411	ILMN_201411	LOC385117	XM_358066.1	XM_358066.1			38093569	XM_358066.1	LOC385117		ILMN_2542200	004490685	S	62	GCAGTAGAGAAGCCCACAAAGCTGGCAAAGGAATCAGAGAGGATGCCTGG										
Mus musculus	RefSeq	ILMN_197256	ILMN_321275	LOC100046599	XM_001476482.1	XM_001476482.1		100046599	149249443	XM_001476482.1	LOC100046599	XP_001476532.1	ILMN_1245905	004480162	S	249	CGGTGTTCAGAAAGACTCCGTGGAGGAAAGGATGTCCATGCGTCAGCAGC					PREDICTED: Mus musculus hypothetical protein LOC100046599 (LOC100046599), mRNA.					
Mus musculus	RefSeq	ILMN_196362	ILMN_196362	AARS2	NM_198608.2	NM_198608.2		224805	52630310	NM_198608.2	Aars2	NP_941010.2	ILMN_2876302	006280563	S	3092	CCGGGCCACCAGGAGACTGTAAGAAACAAAAGCCAACTGAGAGGCAGCAA	17	+	45657535-45657584	17qB3	Mus musculus alanyl-tRNA synthetase 2, mitochondrial (putative) (Aars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules [goid 43039] [evidence IEA]; The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6419] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala) [goid 4813] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of two substances via a carbon-oxygen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate, to form aminoacyl-tRNA or a related compound [goid 16876] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm89; Aarsl; MGC69820	Gm89; Aarsl; MGC69820
Mus musculus	RefSeq	ILMN_199081	ILMN_199081	LOC216397	XM_137325.1	XM_137325.1			20866346	XM_137325.1	LOC216397		ILMN_2533980	006420427	S	605	TCGATGTAAAGATGCACACAGCCTGGGGATATTGGACGCAGCTGTCTCTG										
Mus musculus	MEEBO	ILMN_217680	ILMN_217680	ARID4A	scl0002311.1_59	XM_354675.1			38050413	XM_354675.1	Arid4a		ILMN_1244083	006350347	S	3585	CCTGCAAGAACCTCGCCTCACATCAAAGATGCAGAGAAGGAGAAGCACCG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_217680	ILMN_217680	ARID4A	scl0002311.1_59	XM_354675.1			38050413	XM_354675.1	Arid4a		ILMN_2686296	006980204	S	3595	CCTCGCCTCACATCAAAGATGCAGAGAAGGAGAAGCACCGAGAGAAGCAT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_199590	ILMN_199590	LOC383699	XM_357194.1	XM_357194.1			38074834	XM_357194.1	LOC383699		ILMN_1235455	002070400	S	556	TCGACTGTGTCCGTGCAGTCATACACAGCGGCTGCATCGAGCCTGTATCA										
Mus musculus	RefSeq	ILMN_201072	ILMN_201072	LOC381984	XM_358684.1	XM_358684.1			38088582	XM_358684.1	LOC381984		ILMN_1242873	002810360	S	435	TCTGTGCCAAGCTGTCACCGGGAAGACCAAACAGCCAAGACCTCCACTGG										
Mus musculus	RefSeq	ILMN_185961	ILMN_317497	LOC100044170	XM_001471743.1	XM_001471743.1		100044170	149264549	XM_001471743.1	LOC100044170	XP_001471793.1	ILMN_2494061	004230114	S	1070	CAGTTCCTTTGGATGAGAAGACAGGCTTTCAACTTAGCAGCCATGGTTAC					PREDICTED: Mus musculus hypothetical protein LOC100044170 (LOC100044170), mRNA.					
Mus musculus	RefSeq	ILMN_220276	ILMN_220276	OS9	NM_177614.2	NM_177614.2		216440	31341352	NM_177614.2	Os9	NP_808282.1	ILMN_1246758	003520632	S	2320	CCCAGACTATCTCTTGTCACTGAGGGGATGGGAGACCTTTCATATCACCT	10	-	126532794-126532843	10qD3	Mus musculus amplified in osteosarcoma (Os9), mRNA.				Os-9; AU022351; 4632413K17Rik; 1300007E20	Os-9; AU022351; 4632413K17Rik; 1300007E20
Mus musculus	RefSeq	ILMN_201117	ILMN_254619	EG664876	XM_973189.1	XM_973189.1		664876	94383569	XM_973189.1	EG664876	XP_978283.1	ILMN_1257719	005050450	S	1251	AAATCAGCACAGTTTTTCTGAGGTTCCTGCCCATCCTGGAGTCCAGTGGG	8	-	58017654-58017703	8qB2	PREDICTED: Mus musculus predicted gene, EG664876 (EG664876), mRNA.					
Mus musculus	RefSeq	ILMN_210630	ILMN_210630	PDE6C	NM_033614.1	NM_033614.1		110855	15809035	NM_033614.1	Pde6c	NP_291092.1	ILMN_2862044	006380433	S	2439	ATCCCTGGCGGAGGAGTACGAGGCGAAGGTGAAGGTGACTGAAGAAGAGG	19	+	38255337-38255386	19qC3	Mus musculus phosphodiesterase 6C, cGMP specific, cone, alpha prime (Pde6c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm [goid 7603] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210630	ILMN_210630	PDE6C	NM_033614.1	NM_033614.1		110855	15809035	NM_033614.1	Pde6c	NP_291092.1	ILMN_2862047	000270196	S	2367	GGAGTTCTCTCGGTTTCATGGAGAGATCACACCCATGCTGAACGGCCTTC	19	+	38254744-38254744:38255266-38255314	19qC3	Mus musculus phosphodiesterase 6C, cGMP specific, cone, alpha prime (Pde6c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm [goid 7603] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210630	ILMN_210630	PDE6C	NM_033614.1	NM_033614.1		110855	15809035	NM_033614.1	Pde6c	NP_291092.1	ILMN_1227214	001090201	S	2070	CTGCGAGCAGATGCAAAGTGAAGAAGAAACCATCAAATACGTAACCTCCG	19	+	38252571-38252620	19qC3	Mus musculus phosphodiesterase 6C, cGMP specific, cone, alpha prime (Pde6c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm [goid 7603] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]		
Mus musculus	RefSeq	ILMN_247927	ILMN_247927	CAGE1	NM_027724.1	NM_027724.1		71213	58000406	NM_027724.1	Cage1	NP_082000.1	ILMN_2861743	005890022	S	2271	CAGCAGACTCATTGAGGAGAATGACAAGTACCGGAGACACGTAGGCAGCC	13	-	38104271-38104320	13qA3.3	Mus musculus cancer antigen 1 (Cage1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4933427I01Rik; Ctag3; MGC100323	4933427I01Rik; Ctag3; MGC100323
Mus musculus	RefSeq	ILMN_193987	ILMN_250246	TRIM71	NM_001042503.1	NM_001042503.1		636931	109948299	NM_001042503.1	Trim71	NP_001035968.1	ILMN_2502290	002970647	S	4951	GTTCAGGGAATGTAGAAGATTGTCTGACTGGTGGGAGCACCTCACTCCCT	9	-	114420582-114420631	9qF3	Mus musculus tripartite motif-containing 71 (Trim71), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm1127; lin-41; 2610206G21Rik; Ripply2; mlin-41; Lin41	Gm1127; lin-41; 2610206G21Rik; Ripply2; mlin-41; Lin41
Mus musculus	RefSeq	ILMN_201248	ILMN_250246	TRIM71	NM_001042503.1	NM_001042503.1		636931	109948299	NM_001042503.1	Trim71	NP_001035968.1	ILMN_1240927	007550484	S	3441	CTGGAAGCACTTCGACTCTCCACGGGGCGTGGCTTTCAACAATGAAGGTC	9	-	114422092-114422141	9qF3	Mus musculus tripartite motif-containing 71 (Trim71), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm1127; lin-41; 2610206G21Rik; Ripply2; mlin-41; Lin41	Gm1127; lin-41; 2610206G21Rik; Ripply2; mlin-41; Lin41
Mus musculus	Riken	ILMN_206045	ILMN_206045	PTEN	ri|D030074B08|PX00182M09|AK051115|2030					AK051115	Pten		ILMN_1256502	003610577	S	1774	CTGTGGCATTGATGAGACATGTAAGCAGACTCACCTGCCCCGACCCTTAG							Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]	Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: phosphatidylinositol-3,4,5-trisphosphate + H2O = phosphatidyl inositol-4,5-bisphosphate + phosphate [goid 16314] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199726	ILMN_199726	LOC383873	XM_357304.1	XM_357304.1			38076592	XM_357304.1	LOC383873		ILMN_1255101	001440349	S	249	GACTGATATCGACAGTGACGTCTGGAGTTTGAGGCGTGGTAGTCCGCCCA										
Mus musculus	MEEBO	ILMN_214645	ILMN_214645	SOD2	scl51108.6.3_0	NM_013671.2			31980761	NM_013671.2	Sod2		ILMN_2650280	004860224	S	803	GCACTATGACTGGGGTGCTGTAGTCTTTATTGATGTCTTTCCACATACCT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IMP]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IMP]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of adipocyte differentiation [goid 45599] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an activity stimulus [goid 14823] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an axon injury stimulus [goid 48678] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [evidence IMP]; The process by which acetylcholine signaling causes vasodilation, resulting in a change in blood pressure [goid 3069] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IDA]; The process that occurs in an organ near the end of its active life that is associated with the dismantling of cell components and membranes, and an overall decline in metabolism [goid 10260] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, where the change varies according to the age of the cell or organism [goid 1306] [evidence IMP]; The series of events in which an oxygen stimulus is received by a cell and converted into a molecular signal [goid 3032] [evidence IMP]; Any process that modulates the activity of an enzyme [goid 50790] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating increased oxygen tension [goid 55093] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an erythrophore cell. Erythrophores are pigment cells derived from the neural crest. They contain pteridine and/or carotenoid pigments in structures called pterinosomes or erythrosomes. This gives them an orange to red appearance [goid 48773] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions [goid 55072] [evidence IMP]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IMP]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218188	ILMN_218188	LPL	NM_008509.2	NM_008509.2		16956	126723005	NM_008509.2	Lpl	NP_032535.2	ILMN_2692723	005360300	S	3889	GTGCTAACTTTGTGTCCGTCTCCATCCATGATTGTCTGTCTCACTGAGCC	8	+	71430671-71430720	8qB3.3	Mus musculus lipoprotein lipase (Lpl), mRNA.	A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of triacylglycerol, any triester of glycerol [goid 19433] [evidence IDA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate [goid 4465] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any triester of glycerol [goid 17129] [evidence IC ]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IDA]		
Mus musculus	RefSeq	ILMN_184826	ILMN_258548	ABCB9	NM_019875.2	NM_019875.2		56325	66932951	NM_019875.2	Abcb9	NP_063928.2	ILMN_1239687	000290377	S	1663	TGTTCGAGTTCATCGACCGGCAGCCCACCATGGTGCATGACGGAAGCTTG	5	-	124527212-124527261	5qF	Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 9 (Abcb9), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15197] [evidence IEA]	TAPL; mKIAA1520	TAPL; mKIAA1520
Mus musculus	RefSeq	ILMN_215171	ILMN_319893	LOC677528	XR_034733.1	XR_034733.1		677528	149259745	XR_034733.1	LOC677528		ILMN_2656362	002350487	S	1714	GAAAGCTCAGTAGTAATGCTGTGTCTCACGTAACCAGAATGTGCCTCCTG					PREDICTED: Mus musculus similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 (LOC677528), misc RNA.					
Mus musculus	RefSeq	ILMN_217811	ILMN_217811	DOK2	NM_010071.2	NM_010071.2		13449	118129891	NM_010071.2	Dok2	NP_034201.1	ILMN_3160659	004540564	S	1552	AAGAGACAAAGGGTTTCCACAGATGTCCTGGCTCCTCGGTGTGGGCAGGC	14	+	71178136-71178185	14qD2	Mus musculus docking protein 2 (Dok2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IPI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA];  [goid 5066] [evidence IPI];  [goid 5069] [evidence IPI]	Frip; DokR	Frip; DokR
Mus musculus	RefSeq	ILMN_185541	ILMN_185541	TPCN1	NM_145853.2	NM_145853.2		252972	40254191	NM_145853.2	Tpcn1	NP_665852.1	ILMN_2454786	002850154	S	2651	CCCAGCAGCCCCCTGGCAGTCGCCAGCGCTCCCAGACTGTCACCTAGCTG	5	-	120986113-120986116:120986117-120986162	5qF	Mus musculus two pore channel 1 (Tpcn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730403B01Rik; Tpc1; mKIAA1169	5730403B01Rik; Tpc1; mKIAA1169
Mus musculus	RefSeq	ILMN_185541	ILMN_185541	TPCN1	NM_145853.2	NM_145853.2		252972	40254191	NM_145853.2	Tpcn1	NP_665852.1	ILMN_2443014	005050408	S	1119	CCGGAACCCCTGGTCCTGCGTCTTCTTCATTGTATACCTCTCCATTGAGC	5	-	121003471-121003520	5qF	Mus musculus two pore channel 1 (Tpcn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730403B01Rik; Tpc1; mKIAA1169	5730403B01Rik; Tpc1; mKIAA1169
Mus musculus	RefSeq	ILMN_185541	ILMN_185541	TPCN1	NM_145853.2	NM_145853.2		252972	40254191	NM_145853.2	Tpcn1	NP_665852.1	ILMN_1217102	000650609	S	4516	CCACACCGTGCAGACAATCATTTTGTATGGGTTAAGAGCCACGTCGTCGG	5	-	120984248-120984297	5qF	Mus musculus two pore channel 1 (Tpcn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730403B01Rik; Tpc1; mKIAA1169	5730403B01Rik; Tpc1; mKIAA1169
Mus musculus	MEEBO	ILMN_188336	ILMN_188336	4931433E08RIK	scl52893.6_98				51771729	XM_484765	4931433E08Rik		ILMN_2451795	000520487	S	4	CGCCCTCTTGTTTTGAGAAACAGCAGGTCTAATCTACTGTACCAGGCTCT										
Mus musculus	Riken	ILMN_206147	ILMN_206147	B930090K24RIK	ri|B930090K24|PX00167E03|AK081122|949					AK081122	B930090K24Rik		ILMN_1221652	002260025	S	828	CCAGCGCATTAAGCTCCCTCTAGCCAACTCCACACATTCACACTGTCAGC										
Mus musculus	RefSeq	ILMN_199898	ILMN_199898	LOC381558	XM_355524.1	XM_355524.1			38078830	XM_355524.1	LOC381558		ILMN_2536885	004060113	S	201	AGCTTCCCGACCTGGCGTTGAGGGAAGATGAGGTAGAGGCCATCGCAGAG										
Mus musculus	RefSeq	ILMN_215620	ILMN_259704	FBXL15	NM_133694.2	NM_133694.2		68431	140970873	NM_133694.2	Fbxl15	NP_598455.2	ILMN_2772752	004290451	S	1143	CTACTCCAGGACATGGCAGGCTTCGCACCCTTTGTCAACCTACAGGTCTG	19	+	46404731-46404780	19qC3	Mus musculus F-box and leucine-rich repeat protein 15 (Fbxl15), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		0710008C12Rik; Fbxo37	0710008C12Rik; Fbxo37
Mus musculus	RefSeq	ILMN_197118	ILMN_197118	LOC380829	XM_358436.1	XM_358436.1			38074154	XM_358436.1	LOC380829		ILMN_1242493	006180487	S	435	ACTATGGCTGCTGCGGCGAGGCTATTTCTGGGCTCGCTTTCTCTTCCTGG										
Mus musculus	RefSeq	ILMN_199829	ILMN_199829	LOC383960	XM_358736.1	XM_358736.1			38077723	XM_358736.1	LOC383960		ILMN_2536631	000430563	S	472	CAGGCCATGATTGCTGTCGAAGATGGCACATCTCCCAATGTTTGGCTGGC										
Mus musculus	Riken	ILMN_203706	ILMN_203706	9630023E17RIK	ri|9630023E17|PX00116A05|AK035975|2192					AK035975	9630023E17Rik		ILMN_1257927	002940364	S	1304	AAGGGGTACAGCTGGGAAGGGTGCAGAAGGAGGGTAGTTTTCCTTTGCCC										
Mus musculus	MEEBO	ILMN_192507	ILMN_192507	SCL000031.1_6_REVCOMP	scl000031.1_6_REVCOMP						scl000031.1_6_REVCOMP		ILMN_2488721	004390452	S	5	TACACAGTTAAGGAACACGTGATACATTTTCATGAGTTAGAAACTGAACT										
Mus musculus	RefSeq	ILMN_214991	ILMN_214991	CCDC127	NM_024201.2	NM_024201.2		67433	31541788	NM_024201.2	Ccdc127	NP_077163.1	ILMN_2932814	000270017	S	3071	GAGACAGCACAGGAGGATCTGGAATGGTTTACCTGTGAGAGGAGGTCCTG	13	+	74496805-74496854	13qC1	Mus musculus coiled-coil domain containing 127 (Ccdc127), mRNA.				AI256405; C130002N06; 5430420E17Rik; 0610011N22Rik; AW050060; A430066A18	AI256405; C130002N06; 5430420E17Rik; 0610011N22Rik; AW050060; A430066A18
Mus musculus	RefSeq	ILMN_214991	ILMN_214991	CCDC127	NM_024201.2	NM_024201.2		67433	31541788	NM_024201.2	Ccdc127	NP_077163.1	ILMN_2723666	001440487	S	1320	TGAGCTGGTCCTGTATTCAATAAGCATGTTATTTATTAGCAATGATATGC	13	+	74495054-74495103	13qC1	Mus musculus coiled-coil domain containing 127 (Ccdc127), mRNA.				AI256405; C130002N06; 5430420E17Rik; 0610011N22Rik; AW050060; A430066A18	AI256405; C130002N06; 5430420E17Rik; 0610011N22Rik; AW050060; A430066A18
Mus musculus	RefSeq	ILMN_214991	ILMN_214991	CCDC127	NM_024201.2	NM_024201.2		67433	31541788	NM_024201.2	Ccdc127	NP_077163.1	ILMN_1245467	000840537	S	3160	CTACAAGTGGGAGTCAAGTCCCTTGGTTGGCACACGGATGGTTATAGAGC	13	+	74496894-74496943	13qC1	Mus musculus coiled-coil domain containing 127 (Ccdc127), mRNA.				AI256405; C130002N06; 5430420E17Rik; 0610011N22Rik; AW050060; A430066A18	AI256405; C130002N06; 5430420E17Rik; 0610011N22Rik; AW050060; A430066A18
Mus musculus	RefSeq	ILMN_219700	ILMN_232658	EMX1	NM_010131.2	NM_010131.2		13796	148596966	NM_010131.2	Emx1	NP_034261.1	ILMN_2712356	005290612	S	533	TGGAGCGAGCCTTTGAGAAGAATCACTACGTGGTGGGAGCCGAGCGGAAG				6qC3	Mus musculus empty spiracles homolog 1 (Drosophila) (Emx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC129284; MGC129285	MGC129284; MGC129285
Mus musculus	RefSeq	ILMN_214310	ILMN_214310	OLFR441	NM_146655.1	NM_146655.1		258649	33238915	NM_146655.1	Olfr441	NP_666866.1	ILMN_2751563	007650114	S	599	CAGCTTGTGTGTTCATTTTAGTGGGACCACTGTGCATGGTGCTGGTCTCC	6	+	43066341-43066390	6qB2.1	Mus musculus olfactory receptor 441 (Olfr441), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR261-3	MOR261-3
Mus musculus	RefSeq	ILMN_214310	ILMN_214310	OLFR441	NM_146655.1	NM_146655.1		258649	33238915	NM_146655.1	Olfr441	NP_666866.1	ILMN_1260140	006520026	S	447	AGTTGGCTTCCTTTTGGCTCTTGTCCATTTAATTCTCATCCTGAGGCTGC	6	+	43066189-43066238	6qB2.1	Mus musculus olfactory receptor 441 (Olfr441), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR261-3	MOR261-3
Mus musculus	RefSeq	ILMN_209357	ILMN_251840	SEP15	NM_053102.2	NM_053102.2		93684	110825968	NM_053102.2	Sep15	NP_444332.1	ILMN_2761487	002680487	S	1268	CCACATACAGGTTTTGTAGCTTATTATTATGGAACAGACTGAAGATCTGC	3	+	144260399-144260448	3qH2	Mus musculus selenoprotein (Sep15), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence ISS]	The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis [goid 51084] [evidence TAS]	Interacting selectively with selenium (Se) [goid 8430] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9430015P09Rik	9430015P09Rik
Mus musculus	RefSeq	ILMN_209357	ILMN_251840	SEP15	NM_053102.2	NM_053102.2		93684	110825968	NM_053102.2	Sep15	NP_444332.1	ILMN_1249836	000670161	S	439	GCTCTGCAGCTCTTGCGATCTTCTTGGACAGTTTAATCTGCTCCCACTGG	3	+	144240615-144240664	3qH2	Mus musculus selenoprotein (Sep15), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence ISS]	The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis [goid 51084] [evidence TAS]	Interacting selectively with selenium (Se) [goid 8430] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9430015P09Rik	9430015P09Rik
Mus musculus	RefSeq	ILMN_219519	ILMN_219519	CYR61	NM_010516.1	NM_010516.1		16007	6753593	NM_010516.1	Cyr61	NP_034646.1	ILMN_2710253	006580110	S	691	ATTAAGGACTCCCTGGACGACCAGGATGACCTCCTCGGACTCGATGCCTC	3	-	145311567-145311616	3qH2	Mus musculus cysteine rich protein 61 (Cyr61), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Igfbp10; AI325051; CCN1	Igfbp10; AI325051; CCN1
Mus musculus	RefSeq	ILMN_219519	ILMN_219519	CYR61	NM_010516.1	NM_010516.1		16007	6753593	NM_010516.1	Cyr61	NP_034646.1	ILMN_1235571	003890059	S	1585	GCTCCATATTGGAGCATGTTTACGGATGACGTTCTGTTTTCTGTTTGTAA	3	-	145310324-145310373	3qH2	Mus musculus cysteine rich protein 61 (Cyr61), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Igfbp10; AI325051; CCN1	Igfbp10; AI325051; CCN1
Mus musculus	RefSeq	ILMN_219519	ILMN_219519	CYR61	NM_010516.1	NM_010516.1		16007	6753593	NM_010516.1	Cyr61	NP_034646.1	ILMN_2794645	005900452	S	1702	GAGACAAAATAAGATTAGTTGGGCCAAGTGAAAGCCCTGCTTGTCCTTTG	3	-	145310207-145310256	3qH2	Mus musculus cysteine rich protein 61 (Cyr61), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Igfbp10; AI325051; CCN1	Igfbp10; AI325051; CCN1
Mus musculus	RefSeq	ILMN_217643	ILMN_217643	OLFR742	NM_146430.1	NM_146430.1		258422	33239347	NM_146430.1	Olfr742	NP_666641.1	ILMN_1249533	003190484	S	811	GAAGCTGGAATGCAGAAGCTTGTAACTCTATTTTATTCTGTGGGTACTCC	14	+	51135691-51135740	14qC1	Mus musculus olfactory receptor 742 (Olfr742), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR106-6	MOR106-6
Mus musculus	MEEBO	ILMN_209598	ILMN_209598	SEMA5B	scl49191.18.1_6	XM_147227.1			20892382	XM_147227.1	Sema5b		ILMN_2606570	000050068	S	3701	CTAAGTCTGCCCCTTCTTACTGGTCCCCCCAAAGTCCGGGGCTGCGTCCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]			
Mus musculus	RefSeq	ILMN_200295	ILMN_200295	LOC386158	XM_359098.1	XM_359098.1			38081246	XM_359098.1	LOC386158		ILMN_1230181	004670035	S	151	GACTTCGTGCAGAACCTTGGAGGCCCTATGCTTGCTACTTCCATCTCTCT										
Mus musculus	RefSeq	ILMN_218265	ILMN_218265	KLHDC6	NM_029013.1	NM_029013.1		74589	21312803	NM_029013.1	Klhdc6	NP_083289.1	ILMN_1240324	000290026	S	1195	GGCAAAAGAGCAAGAATATTGAAATCTATAGGTGTGTATCTCATAGCAGG	6	-	88567757-88567806	6qD1	Mus musculus kelch domain containing 6 (Klhdc6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4933428M03Rik; 4833415F11Rik	4933428M03Rik; 4833415F11Rik
Mus musculus	Riken	ILMN_204154	ILMN_204154	C730037N04RIK	ri|C730037N04|PX00087A12|AK050331|1198					AK050331	C730037N04Rik		ILMN_2562789	004780468	S	757	GTAGGCCTCAGGGAGTTTAGAGGTCTGGTGGTATGGAGATGGGGACATTC										
Mus musculus	RefSeq	ILMN_246900	ILMN_246900	SLC9A6	NM_172780.1	NM_172780.1		236794	27370157	NM_172780.1	Slc9a6	NP_766368.1	ILMN_2892678	003610114	S	2449	GTGCTGTGAGTTAATTTGTGTGTGGCAGGGAAGGGGAGGGAAGGGGGAGC	X	+	53008566-53008615	XqA5	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), isoform 6 (Slc9a6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]	3732426M05; 6430520C02Rik; mKIAA0267	3732426M05; 6430520C02Rik; mKIAA0267
Mus musculus	Riken	ILMN_201774	ILMN_201774	2610002B11RIK	ri|2610002B11|ZX00052P18|AK011271|987					AK011271	2610002B11Rik		ILMN_1250653	001340458	S	652	CCGGTTTCCACCCCAGCTATCAAAGAAAAAGATGACTTCCCTGAGCCAAC										
Mus musculus	RefSeq	ILMN_212745	ILMN_212745	GZMF	NM_010374.3	NM_010374.3		14943	116325973	NM_010374.3	Gzmf	NP_034504.1	ILMN_2629794	000510487	S	164	GAGGTTTGTGAAAGATAATGGAAAAAGACATTCCTGTGGAGGCTTCCTGG	14	-	56825788-56825837	14qC3	Mus musculus granzyme F (Gzmf), mRNA.		The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Ctla-7; MCSP-3; CCP4; Ctla7	Ctla-7; MCSP-3; CCP4; Ctla7
Mus musculus	RefSeq	ILMN_188030	ILMN_254616	KLK5	NM_026806.2	NM_026806.2		68668	141801926	NM_026806.2	Klk5	NP_081082.1	ILMN_2449217	004150544	S	847	GTGCTCAGCGGAACAGACCAGGTGTCTACACCAACCTGTGTGAGTTCGTT	7	+	51106159-51106208	7qB4	Mus musculus kallikrein related-peptidase 5 (Klk5), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	1110030O19Rik	1110030O19Rik
Mus musculus	RefSeq	ILMN_214803	ILMN_214803	OTOP1	NM_178139.1	NM_178139.1		21906	30023848	NM_178139.1	Otop1	NP_835259.1	ILMN_3060471	007100139	I	79	GTTTCCTGGGGTGCCTGTGTCTCCTGGAAGGGCTGGGTTGCCTTAGGATT	5	+	38564264-38564313	5qB3	Mus musculus otopetrin 1 (Otop1), transcript variant b, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The series of events in which a gravitational stimulus is received by a cell and converted into a molecular signal [goid 9590] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]		tlt; A530025J20Rik; Otp1	tlt; A530025J20Rik; Otp1
Mus musculus	RefSeq	ILMN_214803	ILMN_214803	OTOP1	NM_178139.1	NM_178139.1		21906	30023848	NM_178139.1	Otop1	NP_835259.1	ILMN_3137899	000240093	A	2924	TGTTTTGTAAGAGTTGGGTCTTGGGGTTGGAGAGATGGCCTGCTGCTCTC	5	+	38592237-38592286	5qB3	Mus musculus otopetrin 1 (Otop1), transcript variant b, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The series of events in which a gravitational stimulus is received by a cell and converted into a molecular signal [goid 9590] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]		tlt; A530025J20Rik; Otp1	tlt; A530025J20Rik; Otp1
Mus musculus	RefSeq	ILMN_214803	ILMN_214803	OTOP1	NM_178139.1	NM_178139.1		21906	30023848	NM_178139.1	Otop1	NP_835259.1	ILMN_1228647	000360021	S	2756	TTTTTTGATTTTAGAAGGCTCACAATGTTGCTTTCCTAAGTGGCTCTGCG	5	+	38592069-38592118	5qB3	Mus musculus otopetrin 1 (Otop1), transcript variant b, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The series of events in which a gravitational stimulus is received by a cell and converted into a molecular signal [goid 9590] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]		tlt; A530025J20Rik; Otp1	tlt; A530025J20Rik; Otp1
Mus musculus	RefSeq	ILMN_219613	ILMN_314728	LOC100040016	XM_001474270.1	XM_001474270.1		100040016	149271506	XM_001474270.1	LOC100040016	XP_001474320.1	ILMN_1229393	003130270	S	448	AGAGCTTCAATGTGCTGCAACTACAAGAGCTGGAGAGCATCTTCCAGTGC	X	+	34945568-34945617	XqA3.3	PREDICTED: Mus musculus similar to reproductive homeobox on X chromosome 2, transcript variant 1 (LOC100040016), mRNA.					
Mus musculus	Riken	ILMN_205800	ILMN_205800	CNNM1	ri|E330038A06|PX00318N22|AK054532|695					AK054532	Cnnm1		ILMN_2575322	002140367	S	540	TGGACTGTGATCTCCTCTGCTGGGCCACCCCTGTACTGACTAGGAACTAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_214668	ILMN_258809	1600002H07RIK	NM_028056.1	NM_028056.1		72016	58037282	NM_028056.1	1600002H07Rik	NP_082332.1	ILMN_2650578	003450187	S	1625	AATTATATCATAGCAGGGTTTGGTAAGCAGCTTTTTGGTTTCTTGTTTCT	17	-	24352469-24352518	17qA3.3	Mus musculus RIKEN cDNA 1600002H07 gene (1600002H07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217552	ILMN_326458	LOC675228	XR_034614.1	XR_034614.1		675228	149269480	XR_034614.1	LOC675228		ILMN_1218325	006650301	S	591	CCACTGCCTCCTCCCTGTGCTGTTAATAGTATCGTTGTTGATATTAAAGG					PREDICTED: Mus musculus similar to vacuolar ATPase subunit F (LOC675228), misc RNA.					
Mus musculus	RefSeq	ILMN_261304	ILMN_261304	OLFR1094	NM_146365.1	NM_146365.1		258362	22129572	NM_146365.1	Olfr1094	NP_666477.1	ILMN_2957580	005570270	S	236	CATTCCTAGATGCCTGTTATTCCACCGTTGTCACTCCGAAGATGTTGGTC	2	+	86669146-86669195	2qD	Mus musculus olfactory receptor 1094 (Olfr1094), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR179-7	MOR179-7
Mus musculus	RefSeq	ILMN_223014	ILMN_223014	EXPI	NM_007969.4	NM_007969.4		14038	126366027	NM_007969.4	Expi	NP_031995.3	ILMN_1239717	000070722	S	344	GTGGAAGATGGATCTTTATAAGCAGGACTGATGGCTAGCCCCAGAAGATT	11	+	83524662-83524711	11qC	Mus musculus extracellular proteinase inhibitor (Expi), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	WDNM1	WDNM1
Mus musculus	MEEBO	ILMN_210165	ILMN_210165	5330439M10RIK	scl38395.1.7_56	NM_183132.1			34147144	NM_183132.1	5330439M10Rik		ILMN_2602881	001850102	S	81	TGGTTGATGTTGGCGCCACTAGGCATTTCCAGGAACGCACGCCTGGCACA										
Mus musculus	RefSeq	ILMN_246727	ILMN_246727	THNSL2	NM_001033929.1	NM_001033929.1		232078	76677924	NM_001033929.1	Thnsl2	NP_001029101.1	ILMN_3147331	006020433	A	1478	ACAGATGCTGCGGGTCACCATTGAGGGCCTGTCCCAGCGGTGGAAAGATT	6	-	71078646-71078695	6qC1	Mus musculus threonine synthase-like 2 (bacterial) (Thnsl2), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins [goid 9088] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: O-phospho-L-homoserine + H2O = L-threonine + phosphate [goid 4795] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IDA]	BC051244; TSH2; MGC59076	BC051244; TSH2; MGC59076
Mus musculus	Riken	ILMN_204685	ILMN_204685	A230080K19RIK	ri|A230080K19|PX00130M02|AK038974|1271					AK038974	A230080K19Rik		ILMN_1240631	002900446	S	983	GGCCTGACATCCCAGCTACTCAAGAGGGTCAAAGGCCAGCTTAGGCACCT										
Mus musculus	RefSeq	ILMN_223983	ILMN_243266	HES7	NM_033041.4	NM_033041.4		84653	146149171	NM_033041.4	Hes7	NP_149030.2	ILMN_2772620	006350070	S	638	AAGACGGGGCGCCCAAGGCCCCGTCACTCCCACCGCCCGCGTTTTGGAGA				11qB3	Mus musculus hairy and enhancer of split 7 (Drosophila) (Hes7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The process by which the anatomical structures of the tail are generated and organized. Morphogenesis pertains to the creation of form. The tail is the hindmost part of some animals [goid 35121] [evidence IMP]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IDA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	Riken	ILMN_201750	ILMN_201750	BCL2L2	ri|2810435A13|ZX00046N16|AK013244|854					AK013244	Bcl2l2		ILMN_1255755	000150438	S	695	CTCTGATGGGAGGCTGGGGTTGTGCTGGGAGGGGCTGAGTTCCCTTATTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200979	ILMN_200979	LOC384687	XM_357791.1	XM_357791.1			38087609	XM_357791.1	LOC384687		ILMN_1235261	005910358	S	557	GACATCAGAGGTGGAGCAGATTCTCAAAAGGCCCTGCCATGACCCCGTGC										
Mus musculus	MEEBO	ILMN_194844	ILMN_194844	TRGV7_D29794_T_CELL_RECEPTOR_GAMMA_VARIABLE_7_277	TRGV7_D29794_T_cell_receptor_gamma_variable_7_277						TRGV7_D29794_T_cell_receptor_gamma_variable_7_277		ILMN_1231136	002600435	S	12	TTTGTGCTTCGGAATGTGGAGGAGTCCGATTCTGCTCTGTACTACTGTGC										
Mus musculus	Riken	ILMN_202077	ILMN_202077	STXBP4	ri|2700027C09|ZX00063A24|AK012293|1659					AK012293	Stxbp4		ILMN_1218456	003400475	S	1386	TCTTGATTAAGGCTTGATGTGGGAGGGCCCAGCCTACAGTGGGTAGTGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_212108	ILMN_212108	CEP1	scl0227751.4_31	XM_130200.1			20826987	XM_130200.1	Cep1		ILMN_2622837	002370176	S	841	CTTCCCACGCCCAAAGGTAAGGGCAAGGATAGAGACATGGGGGCAACCAT										
Mus musculus	RefSeq	ILMN_236082	ILMN_314797	LOC100040799	XM_001475293.1	XM_001475293.1		100040799	149263525	XM_001475293.1	LOC100040799	XP_001475343.1	ILMN_3162394	003120025	S	1537	ACCCACGGGCTACTTGAAGTTAGAAAACGTGGAGATGGACGGAGAGAACA	12	+	111688913-111688962	12qF1	PREDICTED: Mus musculus hypothetical protein LOC100040799 (LOC100040799), mRNA.					
Mus musculus	RefSeq	ILMN_188064	ILMN_188064	YWHAG	NM_018871.2	NM_018871.2		22628	31543975	NM_018871.2	Ywhag	NP_061359.2	ILMN_1258601	006760367	S	3309	CCCCCCAACTCCGTGTTTCGCTAAGGAATTATTTCGCACACGGACCATTC	5	-	136384365-136384414	5qG2	Mus musculus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide (Ywhag), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]	14-3-3gamma; D7Bwg1348e	14-3-3gamma; D7Bwg1348e
Mus musculus	MEEBO	ILMN_187546	ILMN_187546	TTC15	scl3890.1.1_294				31982374	NM_178811	Ttc15		ILMN_2445049	004290452	S	16	TGTGCTCCCCTGGAGGGAACTCAGTTTGGAACTGAAAAGCAGGGTGGGCG								The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201566	ILMN_201566	OLFR889	NM_146482.1	NM_146482.1		258475	33239245	NM_146482.1	Olfr889	NP_666693.1	ILMN_2641716	006380689	S	858	CATCTATAGCATAAGGAATAAGGATGTTCACATTGCACTGAGAAAAACTT	9	+	37924240-37924289	9qA4	Mus musculus olfactory receptor 889 (Olfr889), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR162-2	MOR162-2
Mus musculus	Riken	ILMN_206980	ILMN_206980	EPHA6	ri|4933405C12|PX00641P18|AK077099|1360					AK077099	Epha6		ILMN_1228262	001230154	S	1218	TCATGAGGCTGTTAATGCTGCCATGGCTTCCTATGGCTCCTGAATGGGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]		
Mus musculus	RefSeq	ILMN_244974	ILMN_244974	DGKI	NM_001081206.1	NM_001081206.1		320127	124487070	NM_001081206.1	Dgki	NP_001074675.1	ILMN_3127016	004610692	A	2656	AATGCCTGACCTGGTGGTTGAACAGGCTTCTGGGCTGTCTGACTGGTGGA	6	-	36863732-36863749:36865382-36865413	6qB1	Mus musculus diacylglycerol kinase, iota (Dgki), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A protein complex that stimulates the exchange of guanyl nucleotides by a GTPase [goid 32045] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]; Any process that modulates the activity of a GTPase of the Rap family [goid 32317] [evidence IMP]	Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [evidence IDA]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [evidence IMP]; Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [evidence IPI]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IDA]	C130010K08Rik	C130010K08Rik
Mus musculus	RefSeq	ILMN_200583	ILMN_244974	DGKI	NM_001081206.1	NM_001081206.1		320127	124487070	NM_001081206.1	Dgki	NP_001074675.1	ILMN_1246721	005130706	S	941	TCCCTGGGGGCTCACGCCGCTGTTATTGTCCCGCCCACCTGGATCATTAA	6	-	37013912-37013961	6qB1	Mus musculus diacylglycerol kinase, iota (Dgki), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A protein complex that stimulates the exchange of guanyl nucleotides by a GTPase [goid 32045] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]; Any process that modulates the activity of a GTPase of the Rap family [goid 32317] [evidence IMP]	Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [evidence IDA]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [evidence IMP]; Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [evidence IPI]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IDA]	C130010K08Rik	C130010K08Rik
Mus musculus	RefSeq	ILMN_200583	ILMN_244974	DGKI	NM_001081206.1	NM_001081206.1		320127	124487070	NM_001081206.1	Dgki	NP_001074675.1	ILMN_1215386	002100102	S	3375	GCTACCAGGTTTCAAGGGCTACAGGGATGTACAACAGGACACGATAGCCC	6	-	36797195-36797244	6qB1	Mus musculus diacylglycerol kinase, iota (Dgki), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A protein complex that stimulates the exchange of guanyl nucleotides by a GTPase [goid 32045] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]; Any process that modulates the activity of a GTPase of the Rap family [goid 32317] [evidence IMP]	Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [evidence IDA]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [evidence IMP]; Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [evidence IPI]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IDA]	C130010K08Rik	C130010K08Rik
Mus musculus	RefSeq	ILMN_241195	ILMN_241195	UBE2U	NM_001033773.1	NM_001033773.1		381534	85702122	NM_001033773.1	Ube2u	NP_001028945.1	ILMN_3094771	006420392	A	783	CATGGTCTCAGATAGCCACGACAAAAGTCGCAGAACACTCCAGAAACCCA	4	+	100022227-100022275:100030034-100030034	4qC6	Mus musculus ubiquitin-conjugating enzyme E2U (putative) (Ube2u), mRNA.					
Mus musculus	Riken	ILMN_206067	ILMN_206067	SNTA1	ri|D830047K07|PX00199P22|AK052932|4565					AK052932	Snta1		ILMN_1244949	000990647	S	4482	GAAACTCCAACACCCTCTTTTGACCTCTTGGGGCACCAGGCACACAGTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]	The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192593	ILMN_228121	A630075K04RIK	XM_974206.1	XM_974206.1		319299	94400026	XM_974206.1	A630075K04Rik	XP_979300.1	ILMN_2489519	002120026	S	62	GCCATGTTTGCCATGCTTCGACGGGCTCTAGTTTCTTCAATTCTCAGTTC	16	-	4665727-4665776		PREDICTED: Mus musculus RIKEN cDNA A630075K04 gene (A630075K04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209566	ILMN_209566	SMOX	NM_145533.1	NM_145533.1		228608	21704049	NM_145533.1	Smox	NP_663508.1	ILMN_2766469	004050092	S	791	AATGGACGGAGATCCCAGGCGCCCATCACATCATCCCCTCGGGCTTCATG	2	+	131346209-131346258	2qF1	Mus musculus spermine oxidase (Smox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 46208] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	PAO; PAOh1; B130066H01Rik; SMO	PAO; PAOh1; B130066H01Rik; SMO
Mus musculus	RefSeq	ILMN_209566	ILMN_209566	SMOX	NM_145533.1	NM_145533.1		228608	21704049	NM_145533.1	Smox	NP_663508.1	ILMN_2608052	001580379	S	592	AAACCAGTCAATGCCGAGAGTCAGAACAGCGTCGGGGTGTTCACCCGGGA	2	+	131345867-131345916	2qF1	Mus musculus spermine oxidase (Smox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 46208] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	PAO; PAOh1; B130066H01Rik; SMO	PAO; PAOh1; B130066H01Rik; SMO
Mus musculus	RefSeq	ILMN_209566	ILMN_209566	SMOX	NM_145533.1	NM_145533.1		228608	21704049	NM_145533.1	Smox	NP_663508.1	ILMN_2597030	005050008	S	1812	TTCCTTGAAGAACCACTAACTCGTGACTGCTGGTCCTCGTCCCTTGCCCC	2	+	131350640-131350689	2qF1	Mus musculus spermine oxidase (Smox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 46208] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	PAO; PAOh1; B130066H01Rik; SMO	PAO; PAOh1; B130066H01Rik; SMO
Mus musculus	RefSeq	ILMN_209566	ILMN_209566	SMOX	NM_145533.1	NM_145533.1		228608	21704049	NM_145533.1	Smox	NP_663508.1	ILMN_1256359	000620008	S	1596	GGATGTGGAGAAGCTAGCCAAGCCCCTGCCCTACACAGAGAGCTCCAAGA	2	+	131347901-131347950	2qF1	Mus musculus spermine oxidase (Smox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 46208] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	PAO; PAOh1; B130066H01Rik; SMO	PAO; PAOh1; B130066H01Rik; SMO
Mus musculus	RefSeq	ILMN_209566	ILMN_209566	SMOX	NM_145533.1	NM_145533.1		228608	21704049	NM_145533.1	Smox	NP_663508.1	ILMN_1247267	001660367	S	1814	TCCTTGAAGAACCACTAACTCGTGACTGCTGGTCCTCGTCCCTTGCCCCC	2	+	131350642-131350691	2qF1	Mus musculus spermine oxidase (Smox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 46208] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	PAO; PAOh1; B130066H01Rik; SMO	PAO; PAOh1; B130066H01Rik; SMO
Mus musculus	RefSeq	ILMN_189877	ILMN_246520	ASB7	NM_080443.1	NM_080443.1		117589	17978255	NM_080443.1	Asb7	NP_536691.1	ILMN_2695316	005820050	S	888	GCTGCTTGATGAGCTACCAATTGCCAAGGTCATGAAAGACTACTTAAAAC	7	-	73792691-73792740	7qC	Mus musculus ankyrin repeat and SOCS box-containing protein 7 (Asb7), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Asb-7; AI449039; D030055C23Rik	Asb-7; AI449039; D030055C23Rik
Mus musculus	RefSeq	ILMN_210341	ILMN_210341	MUM1L1	NM_175541.2	NM_175541.2		245631	31342136	NM_175541.2	Mum1l1	NP_780750.1	ILMN_2604603	004560241	S	3106	CAGCTCTATGTTTATGTACAATTTGCAGAATTTGGGTATTTGATTTATAA	X	+	135772629-135772678	XqF1	Mus musculus melanoma associated antigen (mutated) 1-like 1 (Mum1l1), mRNA.				9430086K21Rik	9430086K21Rik
Mus musculus	RefSeq	ILMN_209556	ILMN_241666	SUCLA2	NM_011506.3	NM_011506.3		20916	146134495	NM_011506.3	Sucla2	NP_035636.1	ILMN_2596942	004480477	S	2002	CATGATTCTGTGGTGGTAAAAACACACGCAGATTGATAAGAAAGGCACCT				14qD3	Mus musculus succinate-Coenzyme A ligase, ADP-forming, beta subunit (Sucla2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate [goid 4775] [evidence IEA]; Catalysis of the reaction between succinate and CoA to form succinyl-CoA [goid 4774] [evidence ISS]	4930547K18Rik	4930547K18Rik
Mus musculus	Riken	ILMN_205351	ILMN_205351	C130020N16RIK	ri|C130020N16|PX00168B02|AK047903|3288					AK047903	C130020N16Rik		ILMN_1257052	002650181	S	2868	GGCATTCTCACTGCATTGTTTGGTACCTTCTAGGGGCGCATCATCCGAGG										
Mus musculus	RefSeq	ILMN_223353	ILMN_223353	SPCS2	NM_025668.3	NM_025668.3		66624	142364005	NM_025668.3	Spcs2	NP_079944.1	ILMN_2762956	003460097	S	1221	CCTTTACACACCATTTTTGTGGGTGTATATATATATTTGACTTGGGGAGA	7	-	106987623-106987672	7qE2	Mus musculus signal peptidase complex subunit 2 homolog (S. cerevisiae) (Spcs2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A multi subunit protease complex located in the endoplasmic reticulum membrane that cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space [goid 5787] [evidence IEA]	The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	mKIAA0102; 5730406I15Rik; AA408713; MGC60452	mKIAA0102; 5730406I15Rik; AA408713; MGC60452
Mus musculus	RefSeq	ILMN_211329	ILMN_211329	KCNK2	NM_010607.1	NM_010607.1		16526	6754431	NM_010607.1	Kcnk2	NP_034737.1	ILMN_2651369	007650669	S	829	CCCTTAGGAAACAGCTCCAATCAAGTTAGTCACTGGGACCTCGGAAGCTC	1	-	191119507-191119556	1qH6	Mus musculus potassium channel, subfamily K, member 2 (Kcnk2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The accomplishment of a non-fluctuating membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 30322] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IDA]	A430027H14Rik; AI848635; TREK-1	A430027H14Rik; AI848635; TREK-1
Mus musculus	RefSeq	ILMN_211329	ILMN_211329	KCNK2	NM_010607.1	NM_010607.1		16526	6754431	NM_010607.1	Kcnk2	NP_034737.1	ILMN_1226055	006290452	S	3506	GGAAGCTGACATGGTGGGATGTACCACGTATAAACTGTGAACTGGAGGAC	1	-	191031832-191031881	1qH6	Mus musculus potassium channel, subfamily K, member 2 (Kcnk2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The accomplishment of a non-fluctuating membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 30322] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IDA]	A430027H14Rik; AI848635; TREK-1	A430027H14Rik; AI848635; TREK-1
Mus musculus	MEEBO	ILMN_220290	ILMN_220290	KCNJ6	scl48168.8_10	NM_010606.1			8393656	NM_010606.1	Kcnj6		ILMN_2720186	004040445	S	2945	TGGGAAAGGCCATGGCATTCAGGAAGGCCCTGTGGGTGAAATGACAGGAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA];  [goid 15467] [evidence IDA]		
Mus musculus	MEEBO	ILMN_196248	ILMN_196248	TCOF1	scl51369.24.1_35				6755741	NM_011552	Tcof1		ILMN_2522965	007610603	S	20	CGTGACATGTGTATAGTATATCTATTTTTTTAAGCGACTTGCCTCTCTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The synthesis of the large ribosomal RNA (rRNA) transcript which encodes several rRNAs, e.g. in mammals 28S, 18S and 5.8S, from a nuclear DNA template [goid 42790] [evidence IMP]			
Mus musculus	RefSeq	ILMN_193403	ILMN_245103	VWA1	NM_147776.3	NM_147776.3		246228	142347205	NM_147776.3	Vwa1	NP_680085.2	ILMN_1225566	006100072	S	2568	GCTCGGCCCTCTTCTTACATGTTTTCCTTACACTACTTTGGCTGCAAGTG	4	-	155143079-155143128	4qE2	Mus musculus von Willebrand factor A domain containing 1 (Vwa1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DKFZp7610051; WARP; 4932416A11Rik	DKFZp7610051; WARP; 4932416A11Rik
Mus musculus	RefSeq	ILMN_193403	ILMN_245103	VWA1	NM_147776.3	NM_147776.3		246228	142347205	NM_147776.3	Vwa1	NP_680085.2	ILMN_2622072	002710386	S	238	GTGCACGTGGGCAGCCAGCCTCACACAGAGTTTACTTTTGACCAGTACAG	4	-	155147173-155147222	4qE2	Mus musculus von Willebrand factor A domain containing 1 (Vwa1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DKFZp7610051; WARP; 4932416A11Rik	DKFZp7610051; WARP; 4932416A11Rik
Mus musculus	Riken	ILMN_202400	ILMN_202400	4930556J24RIK	ri|4930556J24|PX00035L10|AK016148|1225					AK016148	4930556J24Rik		ILMN_1225794	007150458	S	981	GCCTGTCACCCAGCAACTCAGCGGTGCAACTACACACTCAACAACCTGCG										
Mus musculus	RefSeq	ILMN_196933	ILMN_196933	LOC331239	XM_284626.2	XM_284626.2			38049707	XM_284626.2	LOC331239		ILMN_1232265	003610528	S	342	GCAGTCAAATTCAACCATGACTTCAGTGCCTGTCCAGAGGGCTCAGGGAG										
Mus musculus	MEEBO	ILMN_196158	ILMN_196158	MYO1E	scl36750.29_511				31341473	NM_181072	Myo1e		ILMN_2522127	005870201	S	3	GGTTTTATTACAGGACTCGCACCAGGTACTTACAGACGCGCCCTCTCCTC						A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_196158	ILMN_196158	MYO1E	scl36750.29_511				31341473	NM_181072	Myo1e		ILMN_1213202	001170669	S	2478	GCCTGAGTCACATATATGTCCTCCTTACTGGCTGCTCTCACACTGTGGAG						A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215693	ILMN_215693	FAF1	NM_007983.2	NM_007983.2		14084	40789279	NM_007983.2	Faf1	NP_032009.2	ILMN_2718815	007560450	S	4296	CTAACCTGTCCCTCTGAGTGGAATTTGGCTTCACTACAGGGTTTCCTACC	4	+	109636432-109636481	4qC7	Mus musculus Fas-associated factor 1 (Faf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]	AA408698; Fam; Dffrx	AA408698; Fam; Dffrx
Mus musculus	RefSeq	ILMN_215693	ILMN_215693	FAF1	NM_007983.2	NM_007983.2		14084	40789279	NM_007983.2	Faf1	NP_032009.2	ILMN_1220475	004220477	S	1281	GACTTTGAAGATGCTTCAGAATTTGGAGTGGATGACGGAGAAGTATTTGG	4	+	109512963-109513012	4qC7	Mus musculus Fas-associated factor 1 (Faf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]	AA408698; Fam; Dffrx	AA408698; Fam; Dffrx
Mus musculus	RefSeq	ILMN_215693	ILMN_215693	FAF1	NM_007983.2	NM_007983.2		14084	40789279	NM_007983.2	Faf1	NP_032009.2	ILMN_2662508	000110487	S	2436	GCTCGTGTCACTCAGTTCAATGTCACACTTCTGCCTCTTGCAAGATTGCT	4	+	109634572-109634621	4qC7	Mus musculus Fas-associated factor 1 (Faf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]	AA408698; Fam; Dffrx	AA408698; Fam; Dffrx
Mus musculus	RefSeq	ILMN_236393	ILMN_236393	EG385328	NM_001034100.1	NM_001034100.1		385328	77539461	NM_001034100.1	EG385328	NP_001029272.1	ILMN_2854888	002900414	S	251	GAGGTGGCCCACACCACTGGCAGGAAGTGCGTAGCTCCAGAGGATGTACA	X	+	13788524-13788573	XqA1.1	Mus musculus predicted gene, EG385328 (EG385328), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC118313	MGC118313
Mus musculus	RefSeq	ILMN_223698	ILMN_223698	TBC1D22A	NM_145476.2	NM_145476.2		223754	42734462	NM_145476.2	Tbc1d22a	NP_663451.2	ILMN_2767791	006510437	S	3156	GAGCTGAGCCGGGCAGGATGTGTGCTTTGAATGTGATGTGTTGGAAACAC	15	+	86328860-86328909	15qE2	Mus musculus TBC1 domain family, member 22a (Tbc1d22a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	D15Ertd781e; MGC28337; BC023106	D15Ertd781e; MGC28337; BC023106
Mus musculus	MEEBO	ILMN_186960	ILMN_186960	SS18	scl51637.11_227				6678146	NM_009280	Ss18		ILMN_1245563	000940403	S	20	TTCTCAGGTGCTTTGGTCTTTTAATGTCTTAAAGATCTTTCTGTCACTTT										
Mus musculus	MEEBO	ILMN_186960	ILMN_186960	SS18	scl51637.11_227				6678146	NM_009280	Ss18		ILMN_2751962	001410553	S	1127	TCCTCACAACATTACTACGAAGGAGGAAACTCCCAGTATGGCCAACAGCA										
Mus musculus	RefSeq	ILMN_187481	ILMN_248838	ZFP292	XM_909747.3	XM_909747.3		30046	149252215	XM_909747.3	Zfp292	XP_914840.3	ILMN_1249547	000450437	S	7864	GGCTGCTGTGGCTGGTAGCAGTCATGTGTGTTCCTGTAAAGACAGTGAAA				4qA5	PREDICTED: Mus musculus zinc finger protein 292, transcript variant 4 (Zfp292), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_187481	ILMN_248838	ZFP292	XM_909747.3	XM_909747.3		30046	149252215	XM_909747.3	Zfp292	XP_914840.3	ILMN_1243910	002340577	S	8100	TCAGTATAGGTAAAGCCACGGGCAGAGGGCAGTACTGATAACTCATGTAC				4qA5	PREDICTED: Mus musculus zinc finger protein 292, transcript variant 4 (Zfp292), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_202706	ILMN_248838	ZFP292	XM_909747.3	XM_909747.3		30046	149252215	XM_909747.3	Zfp292	XP_914840.3	ILMN_1258687	006660241	S	9624	GTTACAAAACATCTGCGTTCACAGTGCTGCCCCGACCTGTAGTGGTGTGG				4qA5	PREDICTED: Mus musculus zinc finger protein 292, transcript variant 4 (Zfp292), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_195060	ILMN_248838	ZFP292	XM_909747.3	XM_909747.3		30046	149252215	XM_909747.3	Zfp292	XP_914840.3	ILMN_2512227	006380687	S	1284	ATGATGAAGAGAATCTTCCAATACCAAATTCTCTACGTTGTGAGCTCTTA				4qA5	PREDICTED: Mus musculus zinc finger protein 292, transcript variant 4 (Zfp292), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212901	ILMN_212901	ONECUT3	NM_139226.3	NM_139226.3		246086	40538835	NM_139226.3	Onecut3	NP_631972.2	ILMN_2643492	001770196	S	4529	AAGCCCAGGTGGACCCCCATCCCTCCATCTGCCCTTCTGGTCCTTACCCA	10	+	79979845-79979894	10qC1	Mus musculus one cut domain, family member 3 (Onecut3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	OC-3; Oc3	OC-3; Oc3
Mus musculus	RefSeq	ILMN_212901	ILMN_212901	ONECUT3	NM_139226.3	NM_139226.3		246086	40538835	NM_139226.3	Onecut3	NP_631972.2	ILMN_2631469	006550332	S	1372	GCACGCTGATTGCCATCTTCAAGGAGAACAAGCGGCCGTCCAAGGAGATG	10	+	79976688-79976737	10qC1	Mus musculus one cut domain, family member 3 (Onecut3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	OC-3; Oc3	OC-3; Oc3
Mus musculus	RefSeq	ILMN_212901	ILMN_212901	ONECUT3	NM_139226.3	NM_139226.3		246086	40538835	NM_139226.3	Onecut3	NP_631972.2	ILMN_1232844	002510594	S	1371	CCGCACGCTGATTGCCATCTTCAAGGAGAACAAGCGGCCGTCCAAGGAGA	10	+	79976687-79976736	10qC1	Mus musculus one cut domain, family member 3 (Onecut3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	OC-3; Oc3	OC-3; Oc3
Mus musculus	RefSeq	ILMN_231991	ILMN_231991	ZFP410	NM_144833.1	NM_144833.1		52708	21450220	NM_144833.1	Zfp410	NP_659082.1	ILMN_2840327	005900414	S	2063	GAGGGGTGCCAATTACACTGTAGCATTGCACTCTCCCTTTAGCAACCTGA	12	+	85233199-85233248	12qD1	Mus musculus zinc finger protein 410 (Zfp410), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Apa1; MGC38535; D12Ertd748e	Apa1; MGC38535; D12Ertd748e
Mus musculus	MEEBO	ILMN_219809	ILMN_219809	9430057O19RIK	scl0231093.9_35	NM_174849.2			31341297	NM_174849.2	9430057O19Rik		ILMN_2752600	001820639	S	2842	GCAAGGTGAGGAAAGCTGGCAGGAATCTGGACTGTGAGGAGAGACTTTTG										
Mus musculus	MEEBO	ILMN_219809	ILMN_219809	9430057O19RIK	scl0231093.9_35	NM_174849.2			31341297	NM_174849.2	9430057O19Rik		ILMN_2752597	000380468	S	2839	GGGGCAAGGTGAGGAAAGCTGGCAGGAATCTGGACTGTGAGGAGAGACTT										
Mus musculus	MEEBO	ILMN_224001	ILMN_224001	BC018462	scl0232821.5_303				22122720	NM_146178	BC018462		ILMN_2772899	003780010	S	1439	GGCCTCCTTAGCCAGGAGTAGCCCATCTGCATCCCATGCAAAGACAGAGT										
Mus musculus	Riken	ILMN_203133	ILMN_203133	6430561B16RIK	ri|6430561B16|PX00047J05|AK032480|2211					AK032480	6430561B16Rik		ILMN_1219677	001090324	S	1848	GGTGCGCCTGGCTAATGTCCCGCAAGCCTTTCAGATGCAGTTGTCTTCTG										
Mus musculus	RefSeq	ILMN_244762	ILMN_244762	1110059E24RIK	NM_025423.1	NM_025423.1		66206	13384815	NM_025423.1	1110059E24Rik	NP_079699.1	ILMN_2846731	004250343	S	1234	CCCTAGAGCCACAGAATAGTGGCCAGGTGATATGATGGGCTTTTCCACAC	19	-	21664554-21664603	19qB	Mus musculus RIKEN cDNA 1110059E24 gene (1110059E24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_195371	ILMN_195371	V1RI3	NM_134220.1	NM_134220.1		171254	21717748	NM_134220.1	V1ri3	NP_598981.1	ILMN_2514985	003400731	S	637	CGTGTTCTCTATCTTTATAGCTCCAGGTTTGCAAACAACTCCCCTCCAGA	13	+	22446851-22446900	13qA3.1	Mus musculus vomeronasal 1 receptor, I3 (V1ri3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_196803	ILMN_196803	LOC244219	XM_146056.1	XM_146056.1			20844211	XM_146056.1	LOC244219		ILMN_2525856	006960121	S	298	GAGGCAGAGGCTATAGACCTGGGTGTGAATTCCACCAGAAGTTTGCTCTC										
Mus musculus	RefSeq	ILMN_217525	ILMN_217525	SLC37A4	NM_008063.2	NM_008063.2		14385	51592075	NM_008063.2	Slc37a4	NP_032089.2	ILMN_2684307	000540022	S	1995	CCACCACTCTCATGAATACCCTGGGACAAAAGGGAAGAATATAGAGGGCA	9	+	44210958-44211007	9qA5.2	Mus musculus solute carrier family 37 (glucose-6-phosphate transporter), member 4 (Slc37a4), mRNA.		Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The chemical reactions and pathways involving lactate, the anion of lactic acid [goid 6089] [evidence IMP]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]; A phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 45730] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [evidence IMP]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IMP]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [evidence IDA]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [evidence IGI]; The stages of blood cell formation that take place after completion of embryonic development [goid 35166] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a myeloid progenitor cell. Myeloid progenitor cells include progenitor cells for any of the myeloid lineages [goid 2318] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of chemokine production [goid 32682] [evidence IMP]; The process of regulating the proliferation and elimination of neutrophils such that the total number of neutrophils within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1780] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]		G6pt1; mG6PT; GSD-1b; G6PT	G6pt1; mG6PT; GSD-1b; G6PT
Mus musculus	RefSeq	ILMN_217732	ILMN_217732	RSPO1	NM_138683.1	NM_138683.1		192199	20149775	NM_138683.1	Rspo1	NP_619624.1	ILMN_2686865	000540373	S	1210	AAGGGCAACAGCAGCCACAGCCAGGGACAACAGGGCCACTCACATCAGTA	4	+	124685719-124685768	4qD2.2	Mus musculus R-spondin homolog (Xenopus laevis) (Rspo1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	R-spondin; Rspondin	R-spondin; Rspondin
Mus musculus	RefSeq	ILMN_213594	ILMN_213594	NUP50	NM_016714.2	NM_016714.2		18141	38016153	NM_016714.2	Nup50	NP_057923.2	ILMN_1244061	004230722	S	2999	TCAGGTTCCGACAAAAGCTGGGTGGCACAGTTGCTTTCTTAAAGCTGCCG	15	+	84771643-84771692	15qE2	Mus musculus nucleoporin 50 (Nup50), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IDA]	The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence TAS]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence TAS]	Npap60; 1700030K07Rik; AI413123	Npap60; 1700030K07Rik; AI413123
Mus musculus	RefSeq	ILMN_213594	ILMN_213594	NUP50	NM_016714.2	NM_016714.2		18141	38016153	NM_016714.2	Nup50	NP_057923.2	ILMN_1253804	003190274	S	1518	AACCCCCCACTCGATGAGAAGCAGCCCACTCTCCCGGCCACCATGCTGAT	15	+	84770162-84770211	15qE2	Mus musculus nucleoporin 50 (Nup50), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IDA]	The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence TAS]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence TAS]	Npap60; 1700030K07Rik; AI413123	Npap60; 1700030K07Rik; AI413123
Mus musculus	RefSeq	ILMN_213594	ILMN_213594	NUP50	NM_016714.2	NM_016714.2		18141	38016153	NM_016714.2	Nup50	NP_057923.2	ILMN_2748839	000460102	S	3001	CAGGTTCCGACAAAAGCTGGGTGGCACAGTTGCTTTCTTAAAGCTGCCGT	15	+	84771645-84771694	15qE2	Mus musculus nucleoporin 50 (Nup50), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IDA]	The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence TAS]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence TAS]	Npap60; 1700030K07Rik; AI413123	Npap60; 1700030K07Rik; AI413123
Mus musculus	RefSeq	ILMN_187794	ILMN_238419	4921513D11RIK	XM_982919.1	XM_982919.1		70923	94404110	XM_982919.1	4921513D11Rik	XP_988013.1	ILMN_2447153	003800338	S	643	CCCGAACATGGCGATAGATACTTTGCAAATCTGGAAACAAAACCCGGTTC					PREDICTED: Mus musculus RIKEN cDNA 4921513D11 gene (4921513D11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_195184	ILMN_246276	SLC14A1	NM_028122.3	NM_028122.3		108052	56118237	NM_028122.3	Slc14a1	NP_082398.1	ILMN_1214917	007560538	S	1174	CCCCTCAGCAAAGTTACCTACTCTGAGGAGAACCGCATCTTCTACCTCCA	18	-	78299167-78299216	18qE3	Mus musculus solute carrier family 14 (urea transporter), member 1 (Slc14a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement into, out of or within the cell of urea, the water-soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle [goid 15840] [evidence IMP]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence IDA]	Enables the directed movement of water (H2O) into, out of, within or between cells [goid 5372] [evidence IDA]; Enables the directed movement of urea cross a membrane into, out of, within or between cells. Urea is the water soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle. It is the main nitrogen-containing (urinary) excretion product in ureotelic animals [goid 15204] [evidence IMP]	2610507K20Rik; 3021401A05Rik; UT-B	2610507K20Rik; 3021401A05Rik; UT-B
Mus musculus	RefSeq	ILMN_195184	ILMN_246276	SLC14A1	NM_028122.3	NM_028122.3		108052	56118237	NM_028122.3	Slc14a1	NP_082398.1	ILMN_1235006	001660039	S	1760	GAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGATGTTCTCTTAATAAG	18	-	78298581-78298630	18qE3	Mus musculus solute carrier family 14 (urea transporter), member 1 (Slc14a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement into, out of or within the cell of urea, the water-soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle [goid 15840] [evidence IMP]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence IDA]	Enables the directed movement of water (H2O) into, out of, within or between cells [goid 5372] [evidence IDA]; Enables the directed movement of urea cross a membrane into, out of, within or between cells. Urea is the water soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle. It is the main nitrogen-containing (urinary) excretion product in ureotelic animals [goid 15204] [evidence IMP]	2610507K20Rik; 3021401A05Rik; UT-B	2610507K20Rik; 3021401A05Rik; UT-B
Mus musculus	RefSeq	ILMN_220411	ILMN_220411	MPHOSPH8	NM_023773.1	NM_023773.1		75339	13357211	NM_023773.1	Mphosph8	NP_076262.1	ILMN_2721709	007400307	S	2885	GTGGAACAGTACGTGTAAGAAATATTTAAGGAAATTAAAAACCTTTTGAA	14	+	57316213-57316262	14qC3	Mus musculus M-phase phosphoprotein 8 (Mphosph8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AU040635; 1500035L22Rik	AU040635; 1500035L22Rik
Mus musculus	RefSeq	ILMN_188378	ILMN_243173	KLHL15	NM_001039061.1	NM_001039061.1		236904	84794654	NM_001039061.1	Klhl15	NP_001034150.1	ILMN_1214803	006660592	S	1428	GGAGGGCCCCCAAGTACCTCTAAGGCCAGACTGCCTTGCTATTGTCAATA	X	+	91517919-91517968	XqC3	Mus musculus kelch-like 15 (Drosophila) (Klhl15), transcript variant 1, mRNA.				6330500C13Rik; MGC47138	6330500C13Rik; MGC47138
Mus musculus	MEEBO	ILMN_185461	ILMN_185461	TGFBRAP1	scl0317645.1_221						Tgfbrap1		ILMN_2427213	003800730	S	6	GGAGGGTTACTTAGCACCACTTTCCTGTCTATGGTGTACGCTTTGTTTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Mus musculus	RefSeq	ILMN_199853	ILMN_247586	PRDX6-RS2	XM_001000802.1	XM_001000802.1		384001	94371588	XM_001000802.1	Prdx6-rs2	XP_001000802.1	ILMN_1243478	006350754	S	497	TCTTCAGCTGACAGCAGCAAAGCCAGTTGATTGGAAGAAGGGGGAGAGCA				4qA3	PREDICTED: Mus musculus peroxiredoxin 6, related sequence 2 (Prdx6-rs2), mRNA.					
Mus musculus	RefSeq	ILMN_221116	ILMN_221116	D8ERTD82E	NM_172911.2	NM_172911.2		244418	141802158	NM_172911.2	D8Ertd82e	NP_766499.1	ILMN_2731237	002260474	S	4361	TCCTACAACTTCTCTGAGCCATTCCATCGCCACCGCCTTCCACGCCTGCC	8	+	37210455-37210471:37210472-37210504	8qA4	Mus musculus DNA segment, Chr 8, ERATO Doi 82, expressed (D8Ertd82e), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	MGC100334; mFLJ00269; FLJ00269; 9830148H23	MGC100334; mFLJ00269; FLJ00269; 9830148H23
Mus musculus	RefSeq	ILMN_211605	ILMN_211605	2410018M08RIK	NM_183088.1	NM_183088.1		71970	46810302	NM_183088.1	2410018M08Rik	NP_898911.1	ILMN_2888539	005490195	S	2311	TTCTGATCTGGTGAGAAAGAAGCAGTCTCAACCTTCGCACTGAGGTTGGC	5	+	130188145-130188194	5qG1.3	Mus musculus RIKEN cDNA 2410018M08 gene (2410018M08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211379	ILMN_243901	OLFR746	NM_146298.2	NM_146298.2		258295	153945892	NM_146298.2	Olfr746	NP_666410.2	ILMN_2770327	004760689	S	614	TTATCATTATTCTCACTGGTTTGTACATCCTTGGATCTTATGCCTTGGAG				14qC1	Mus musculus olfactory receptor 746 (Olfr746), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR106-12	MOR106-12
Mus musculus	RefSeq	ILMN_187731	ILMN_227668	1500009L16RIK	XM_899407.2	XM_899407.2		69784	94388505	XM_899407.2	1500009L16Rik	XP_904500.1	ILMN_1248734	007210315	S	398	GATATCTTCAAACAAATTCCGAAAGGTCATTCCTGCTGTGCAACCTCGCC	10	+	83224711-83224760	10qC1	PREDICTED: Mus musculus RIKEN cDNA 1500009L16 gene (1500009L16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223044	ILMN_223044	SAA2	NM_011314.1	NM_011314.1		20209	6755393	NM_011314.1	Saa2	NP_035444.1	ILMN_2758571	001190524	S	411	TCCTATTAGTTCAGAAGGCTGTGTTGGGGTCCTGAGGGTGGGGTCTGGGC	7	+	54009485-54009534	7qB4	Mus musculus serum amyloid A 2 (Saa2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	amyloid A; AW111173; Saa-2; Saa1	amyloid A; AW111173; Saa-2; Saa1
Mus musculus	MEEBO	ILMN_188954	ILMN_188954	6330540D07RIK	scl53740.10_394						6330540D07Rik		ILMN_1224699	001820392	S	20	GGTGCTAAGTGTTAGCCTATACAGAAGAAACCTGGGTACACGTGATCCCC										
Mus musculus	MEEBO	ILMN_186284	ILMN_186284	AGTPBP1	scl11421.1.1_60				12963640	NM_023328	Agtpbp1		ILMN_1240174	005360215	S	17	CCTGTACCAGGTAGGTGACAGATTATTGTCAGTGCACTGTGTCCTCCCCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IGI]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219511	ILMN_219511	CBWD1	NM_146097.2	NM_146097.2		226043	118130238	NM_146097.2	Cbwd1	NP_666209.1	ILMN_2709864	000460672	S	1261	TCCTGGATCCACTACCGCTGTTGTGATTTGGGAGTATACGTATAATAGTA	19	-	24994981-24995030	19qB	Mus musculus COBW domain containing 1 (Cbwd1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC28027; AV349248; MGC59411; BC018472	MGC28027; AV349248; MGC59411; BC018472
Mus musculus	RefSeq	ILMN_246802	ILMN_246802	EIF4E1B	NM_001039683.1	NM_001039683.1		218268	89199241	NM_001039683.1	Eif4e1b	NP_001034772.1	ILMN_3140803	006860039	A	780	GACCGGTTTCAGCCACTACTCAGTGGGCACCCTCATCTTGCTGCTTGATG	13	+	54888758-54888807	13qB1	Mus musculus eukaryotic translation initiation factor 4E family member 1B (Eif4e1b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AA473955; Gm273; Eif4eloo	AA473955; Gm273; Eif4eloo
Mus musculus	RefSeq	ILMN_260450	ILMN_260450	OLFR995	NM_146434.1	NM_146434.1		258426	33239123	NM_146434.1	Olfr995	NP_666645.1	ILMN_2782177	001710463	S	303	GTTGGTCTATGCCACATTTGCGACCAGTGACTGTTACCTCCTCGCTGTTA	2	-	85278961-85279010	2qD	Mus musculus olfactory receptor 995 (Olfr995), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR203-3	MOR203-3
Mus musculus	RefSeq	ILMN_193620	ILMN_241734	FREQ	NM_019681.3	NM_019681.3		14299	118130553	NM_019681.3	Freq	NP_062655.1	ILMN_1244929	006250019	S	1000	GCCGCCTGAAGCCACTGGTTCCAATCGTCAACAACCTCCGCTTGTCCAAA	2	+	31147956-31148005	2qB	Mus musculus frequenin homolog (Drosophila) (Freq), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50806] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]	Mfreq; AI836659; A730032G13Rik; Ncs1; 9430075O15Rik; NCS-1	Mfreq; AI836659; A730032G13Rik; Ncs1; 9430075O15Rik; NCS-1
Mus musculus	RefSeq	ILMN_193620	ILMN_241734	FREQ	NM_019681.3	NM_019681.3		14299	118130553	NM_019681.3	Freq	NP_062655.1	ILMN_1255414	005550603	S	857	AACCACTAGCCTCTTTCTGTGCCATGAGGCCACCGCAGCCTGACACCGCC	2	+	31147813-31147862	2qB	Mus musculus frequenin homolog (Drosophila) (Freq), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50806] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]	Mfreq; AI836659; A730032G13Rik; Ncs1; 9430075O15Rik; NCS-1	Mfreq; AI836659; A730032G13Rik; Ncs1; 9430075O15Rik; NCS-1
Mus musculus	RefSeq	ILMN_201517	ILMN_317565	LOC100047935	XR_033756.1	XR_033756.1		100047935	149258029	XR_033756.1	LOC100047935		ILMN_1239211	002490288	S	899	GTCTCTTGCCCAGAAGAAAGATCGGGTTGCTCAAAAGAAGGCAAGCTTCC					PREDICTED: Mus musculus similar to ribosomal protein L5 (LOC100047935), misc RNA.					
Mus musculus	RefSeq	ILMN_261798	ILMN_261798	MEF2B	NM_001045484.1	NM_001045484.1		17259	113865986	NM_001045484.1	Mef2b	NP_001038949.1	ILMN_3111575	006020243	A	1195	ACTGTGCATCACTAAGGCCCTGTCCCTTCCTGGGGGCCGCTGCATCAATA	8	+	72691270-72691319	8qB3.3	Mus musculus myocyte enhancer factor 2B (Mef2b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210829	ILMN_261798	MEF2B	NM_001045484.1	NM_001045484.1		17259	113865986	NM_001045484.1	Mef2b	NP_001038949.1	ILMN_2609630	007400402	S	957	ATCAAGTCTGAGCGACTGTCTCCAGTCACTGGGACCTCTGGCGACTTCCC	8	+	72691032-72691081	8qB3.3	Mus musculus myocyte enhancer factor 2B (Mef2b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_258339	ILMN_258339	GALNS	NM_016722.2	NM_016722.2		50917	31980653	NM_016722.2	Galns	NP_057931.2	ILMN_2998230	006580193	S	2249	GACTGAGAGGAAGAATAAAGGAACAGGAGGGGGGTTAGCTCTGGTAGCCC	8	-	125102278-125102327	8qE1	Mus musculus galactosamine (N-acetyl)-6-sulfate sulfatase (Galns), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISO]; Catalysis of the reaction: hydrolysis of the 6-sulfate groups of the N-acetyl-D-galactosamine 6-sulfate units of chondroitin sulfate and of the D-galactose 6-sulfate units of keratan sulfate [goid 43890] [evidence IEA]	FLJ00319; mFLJ00319	FLJ00319; mFLJ00319
Mus musculus	RefSeq	ILMN_242196	ILMN_242196	USP33	NM_133247.2	NM_133247.2		170822	116008149	NM_133247.2	Usp33	NP_573510.2	ILMN_3129526	007200544	A	3816	CAACTACAAACATGCAGGTGACTGAGGGACAGCATTCATGGTGACTTTGC	3	+	152056206-152056255	3qH3	Mus musculus ubiquitin specific peptidase 33 (Usp33), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence ISA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AA409780; 9830169D19Rik; Vdu1	AA409780; 9830169D19Rik; Vdu1
Mus musculus	RefSeq	ILMN_206369	ILMN_242196	USP33	NM_133247.2	NM_133247.2		170822	116008149	NM_133247.2	Usp33	NP_573510.2	ILMN_1218494	006480240	S	3815	GCAACTACAAACATGCAGGTGACTGAGGGACAGCATTCATGGTGACTTTG	3	+	152056205-152056254	3qH3	Mus musculus ubiquitin specific peptidase 33 (Usp33), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence ISA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AA409780; 9830169D19Rik; Vdu1	AA409780; 9830169D19Rik; Vdu1
Mus musculus	RefSeq	ILMN_228640	ILMN_228640	NODAL	NM_013611.3	NM_013611.3		18119	62996442	NM_013611.3	Nodal	NP_038639.1	ILMN_3160797	006770402	S	801	CTGGGGCTCCTGGATCATCTACCCCAAGCAGTACAATGCCTATCGCTGTG	10	+	60886334-60886383	10qB4	Mus musculus nodal (Nodal), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence ISA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IGI]; The process that prevents cells of the epiblast from differentiating into neuroepithelial cells before the appropriate time [goid 2085] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IDA]; The morphogenesis of trophectoderm cells [goid 1831] [evidence IMP]; A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IGI]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IDA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IGI]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Tg.413d	Tg.413d
Mus musculus	RefSeq	ILMN_231787	ILMN_231787	POU4F1	NM_011143.3	NM_011143.3		18996	88759355	NM_011143.3	Pou4f1	NP_035273.2	ILMN_3035601	000670059	I	2516	CCCCATCAGAACCATTTCTGTGCGCCAACATACAACAGGGAGATGTGTCC	14	-	104862772-104862821	14qE2.3	Mus musculus POU domain, class 4, transcription factor 1 (Pou4f1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The series of events during equilibrioception by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception plays an important role in the ability of an organism to perceive its orientation with respect to gravity [goid 51355] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system [goid 48934] [evidence IMP]; The orderly movement of cells that will reside in the hindbrain [goid 21535] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system [goid 48934] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Brn3; Brn-3.0; Brn3.0; E130119J07Rik; Brn-3; Brn3a	Brn3; Brn-3.0; Brn3.0; E130119J07Rik; Brn-3; Brn3a
Mus musculus	RefSeq	ILMN_193019	ILMN_231787	POU4F1	NM_011143.3	NM_011143.3		18996	88759355	NM_011143.3	Pou4f1	NP_035273.2	ILMN_2493408	001050129	S	3619	TGTTGGAGATCCAGGGATGAACAAATAAAAAGATTTACAAAGGTTGTTTT	14	-	104861669-104861718	14qE2.3	Mus musculus POU domain, class 4, transcription factor 1 (Pou4f1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The series of events during equilibrioception by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception plays an important role in the ability of an organism to perceive its orientation with respect to gravity [goid 51355] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system [goid 48934] [evidence IMP]; The orderly movement of cells that will reside in the hindbrain [goid 21535] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system [goid 48934] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Brn3; Brn-3.0; Brn3.0; E130119J07Rik; Brn-3; Brn3a	Brn3; Brn-3.0; Brn3.0; E130119J07Rik; Brn-3; Brn3a
Mus musculus	RefSeq	ILMN_231787	ILMN_231787	POU4F1	NM_011143.3	NM_011143.3		18996	88759355	NM_011143.3	Pou4f1	NP_035273.2	ILMN_3109300	000070747	A	1287	GCGCAGCGTGAGAAAATGAACAAGCCGGAGCTCTTCAACGGCGGCGAGAA	14	-	104865141-104865190	14qE2.3	Mus musculus POU domain, class 4, transcription factor 1 (Pou4f1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The series of events during equilibrioception by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception plays an important role in the ability of an organism to perceive its orientation with respect to gravity [goid 51355] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system [goid 48934] [evidence IMP]; The orderly movement of cells that will reside in the hindbrain [goid 21535] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system [goid 48934] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Brn3; Brn-3.0; Brn3.0; E130119J07Rik; Brn-3; Brn3a	Brn3; Brn-3.0; Brn3.0; E130119J07Rik; Brn-3; Brn3a
Mus musculus	RefSeq	ILMN_221517	ILMN_221517	BDKRB2	NM_009747.2	NM_009747.2		12062	31560615	NM_009747.2	Bdkrb2	NP_033877.3	ILMN_1241487	003120707	S	1597	GGCTACATGCACAGTAGGCATGGCCGCCTCATTTCCCAGTTTCAAGGGTA	12	+	106831198-106831247	12qE	Mus musculus bradykinin receptor, beta 2 (Bdkrb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with bradykinin to initiate a change in cell activity [goid 4947] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	BRB2; BK-2; B2; B(2); BK2; BK2R; B2R; BKR2	BRB2; BK-2; B2; B(2); BK2; BK2R; B2R; BKR2
Mus musculus	RefSeq	ILMN_221040	ILMN_221040	OLFR250	NM_207552.1	NM_207552.1		404312	46430555	NM_207552.1	Olfr250	NP_997435.1	ILMN_2730265	004200242	S	647	TTATTGTATCCTCATATGCTTTGATTCTTGTCAATGTTATCCATTTGTCA					Mus musculus olfactory receptor 250 (Olfr250), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR170-14	MOR170-14
Mus musculus	RefSeq	ILMN_220163	ILMN_220163	RGS6	NM_015812.3	NM_015812.3		50779	146134498	NM_015812.3	Rgs6	NP_056627.1	ILMN_1235475	002340059	S	2389	CCCCCAGCTCCCATCAAATGTCTAAGGGTCCAGAGCTTGAAGAGGCACCC				12qD1	Mus musculus regulator of G-protein signaling 6 (Rgs6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_206372	ILMN_206372	3930401E15RIK	ri|3930401E15|PX00010D02|AK076210|1842					AK076210	3930401E15Rik		ILMN_2579611	007610139	S	866	GAACACCACAACCCGCGTCGGATCCTAACTACGCTTCGAGATGCGCCATT										
Mus musculus	MEEBO	ILMN_222312	ILMN_222312	SLC27A3	scl21918.10.1_222	XM_130954.3			38077586	XM_130954.3	Slc27a3		ILMN_2747857	006660747	S	2220	GCACCAGGGAGGGTTTTCGGGTATCTTTTGTATATGGAGTCATTATTTTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15908] [evidence IMP]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IC ]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence TAS]; Catalysis of the reaction: acetyl-CoA + n malonyl-CoA + 2n NADH + 2n NADPH + 4n H+ = a long-chain acyl-CoA + n CoA + n CO2 + 2n NAD+ + 2n NADP+ [goid 4321] [evidence IMP]		
Mus musculus	Riken	ILMN_204692	ILMN_204692	A330045B10RIK	ri|A330045B10|PX00131F12|AK039453|2730					AK039453	A330045B10Rik		ILMN_2566907	005700047	S	2446	CCTAGTGCTGCTCTCTGAATACTAGCCTTTATAGGGGTGAGCTGGCATAC										
Mus musculus	RefSeq	ILMN_218473	ILMN_218473	LONP2	NM_025827.2	NM_025827.2		66887	31981168	NM_025827.2	Lonp2	NP_080103.1	ILMN_2913590	006180300	S	2437	CCTAGCAGCACACCGAGCAGGACTGAAGCAGATCATAATTCCGCAGAGGA	8	+	89240171-89240220	8qC3	Mus musculus lon peptidase 2, peroxisomal (Lonp2), mRNA. XM_001000568	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The material contained within the membrane of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase [goid 5782] [evidence ISS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	1300002A08Rik; AU015403; Lonp	1300002A08Rik; AU015403; Lonp
Mus musculus	RefSeq	ILMN_220196	ILMN_226096	HMGCR	NM_008255.1	NM_008255.1		15357	56119095	NM_008255.1	Hmgcr	NP_032281.1	ILMN_1225718	004060408	S	2976	GCACCACAGATGTGAGCTACAGTTCGTTTCTGAAAGCTACCACAAGCTGG	13	-	97420233-97420282	13qD1	Mus musculus 3-hydroxy-3-methylglutaryl-Coenzyme A reductase (Hmgcr), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15936] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IGI]	Catalysis of the reaction: (R)-mevalonate + CoA + 2 NADP+ = (S)-3-hydroxy-3-methylglutaryl-CoA + 2 NADPH + 2 H+ [goid 4420] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: (R)-mevalonate + CoA + 2 NADP+ = (S)-3-hydroxy-3-methylglutaryl-CoA + 2 NADPH + 2 H+ [goid 4420] [evidence IDA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]	Red; MGC103269; HMG-CoAR	Red; MGC103269; HMG-CoAR
Mus musculus	RefSeq	ILMN_226693	ILMN_226693	4922505G16RIK	NM_001039557.1	NM_001039557.1		629499	88319951	NM_001039557.1	4922505G16Rik	NP_001034646.1	ILMN_3099055	003830102	A	2892	CTGTTCCGAATCCAGAGGGTGGGGAGTACATCAGAAGCAGAGACAAGCGT	2	-	156903152-156903201	2qH1	Mus musculus RIKEN cDNA 4922505G16 gene (4922505G16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_226693	ILMN_226693	4922505G16RIK	NM_001039557.1	NM_001039557.1		629499	88319951	NM_001039557.1	4922505G16Rik	NP_001034646.1	ILMN_3026244	006650189	I	1286	GACAGCAGGAGAGTTGCTGATAACCTTGGTGAAGAGTGCAGAGGCTCGGT	2	-	156924510-156924559	2qH1	Mus musculus RIKEN cDNA 4922505G16 gene (4922505G16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_206856	ILMN_261437	D630036G22RIK	XM_975307.1	XM_975307.1		442807	94364929	XM_975307.1	D630036G22Rik	XP_980401.1	ILMN_2583188	007320241	S	1870	ACCCGCTGAGAGAGAGTACGAAGAGCACGGCATTGGTTGTGCCCAGAGAC					PREDICTED: Mus musculus RIKEN cDNA D630036G22 gene (D630036G22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218351	ILMN_233983	CKAP5	NM_029437.1	NM_029437.1		75786	66955861	NM_029437.1	Ckap5	NP_083713.1	ILMN_2694659	001190066	S	6185	GCCTCAAGTCTGCACATGCTCTGCTTCTAGAAGACTGACTGTGGATTAGC	2	+	91460512-91460561	2qE1	Mus musculus cytoskeleton associated protein 5 (Ckap5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle pole body (SPB). The SPB is the microtubule organizing center in fungi, and is functionally homologous to the animal cell centrosome [goid 51300] [evidence ISO]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]; Interacting selectively with any complex of RNA and protein [goid 43021] [evidence ISO]	4930432B04Rik; D730027C18Rik; T25636; 3110043H24Rik; mKIAA0097	4930432B04Rik; D730027C18Rik; T25636; 3110043H24Rik; mKIAA0097
Mus musculus	Riken	ILMN_206477	ILMN_206477	2310044D20RIK	ri|D430003I21|PX00193J07|AK084861|3461					AK084861	2310044D20Rik		ILMN_2580370	000990377	S	3187	TTGCGGAGCACAGTCAAACTGAAGTGAAGCTATAGGAGTTACTATGGGCC										
Mus musculus	Riken	ILMN_205734	ILMN_205734	A330038H24RIK	ri|A330038H24|PX00131E18|AK039395|729					AK039395	A330038H24Rik		ILMN_1224795	005860731	S	466	CTCAGGCAGTGCAATACCAAACATTGCCAGCAGAGGTCAGGAGAAGTCCC										
Mus musculus	MEEBO	ILMN_185565	ILMN_185565	SCL0001379.1_70	scl0001379.1_70	AK049469.1			26340201	AK049469.1	scl0001379.1_70		ILMN_2428113	006590369	S	2	TCAGGGCATGTTCCTGTCCAGAGAAGACCACAATGCCCCACTCCCTAGCC										
Mus musculus	RefSeq	ILMN_214536	ILMN_254589	CYP27B1	NM_010009.1	NM_010009.1		13115	51890202	NM_010009.1	Cyp27b1	NP_034139.1	ILMN_2751094	000510136	S	2196	GGCTATTCAGCACCATACATTCTCAGACTGAACCTGGACCATGTGGCAGG	10	+	126489816-126489865	10qD3	Mus musculus cytochrome P450, family 27, subfamily b, polypeptide 1 (Cyp27b1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O [goid 4498] [evidence IEA]	Cyp27b; P450c1; Cp2b; MGC91184; VddrI; Cyp40; Pddr; Vdr; Vddr; Vdd1; Cyp1	Cyp27b; P450c1; Cp2b; MGC91184; VddrI; Cyp40; Pddr; Vdr; Vddr; Vdd1; Cyp1
Mus musculus	Riken	ILMN_203924	ILMN_203924	9930022F21RIK	ri|9930022F21|PX00120E19|AK036897|4230					AK036897	9930022F21Rik		ILMN_1219878	003990711	S	3982	GCTGTGAAGCATTACCACCGTCCATCCCCAGAGCCTTTTCCTCCACAAGC										
Mus musculus	RefSeq	ILMN_211626	ILMN_211626	APBH	NM_020563.2	NM_020563.2		57426	142357193	NM_020563.2	Apbh	NP_065588.1	ILMN_1244436	004060041	S	317	CAAGGAAGCCTCTTGCCTGATTACCTACATAGATGCAACAAGCCCTACCC	7	-	32075590-32075639	7qB1	Mus musculus androgen-binding protein eta (Apbh), mRNA.				Scgb1b1; Mja1l; LGP	Scgb1b1; Mja1l; LGP
Mus musculus	RefSeq	ILMN_219293	ILMN_245198	CCDC103	NM_028492.2	NM_028492.2		73293	141802920	NM_028492.2	Ccdc103	NP_082768.1	ILMN_1224090	000870010	S	834	GGGCTCCTACAGGAGCTGCTAGAACTGTATGGAGTCCATTGATAGGACTG	11	+	102745563-102745604:102745605-102745612	11qE1	Mus musculus coiled-coil domain containing 103 (Ccdc103), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700039D13Rik; MGC151148; MGC151146; 4933439F11Rik	1700039D13Rik; MGC151148; MGC151146; 4933439F11Rik
Mus musculus	Riken	ILMN_207192	ILMN_207192	A730086L23RIK	ri|A730086L23|PX00661B21|AK080555|1751					AK080555	A730086L23Rik		ILMN_2585738	006060735	S	1186	CCCAGCGCTTAGCCACCTTACCCATGCCTGATGACTCTCTAGAAAAGCTT										
Mus musculus	RefSeq	ILMN_200529	ILMN_252479	EG634650	NM_001039647.1	NM_001039647.1		634650	88900482	NM_001039647.1	EG634650	NP_001034736.1	ILMN_1242854	004210451	S	1739	GGCTCTCCTTGAGGAAGGCTATAAGAAGAAAGCTGAGGAAATGAGAAGAG	5	-	105752964-105753013	5qE5	Mus musculus predicted gene, EG634650 (EG634650), mRNA.				MGC117932	MGC117932
Mus musculus	RefSeq	ILMN_252479	ILMN_252479	EG634650	NM_001039647.1	NM_001039647.1		634650	88900482	NM_001039647.1	EG634650	NP_001034736.1	ILMN_2837493	000450687	S	2421	CTCCAACCTTGACAGAATGTATCATCATGATTCATGGACCACAACAAACC	5	-	105752282-105752331	5qE5	Mus musculus predicted gene, EG634650 (EG634650), mRNA.				MGC117932	MGC117932
Mus musculus	RefSeq	ILMN_198985	ILMN_311235	LOC100048132	XM_001479605.1	XM_001479605.1		100048132	149259614	XM_001479605.1	LOC100048132	XP_001479655.1	ILMN_1247993	001740341	S	448	GATGACAGCATCCCTGAGATTGTGCCCCGGTGGGAGTTTGGAGACGCCTT					PREDICTED: Mus musculus similar to hCG1646420 (LOC100048132), mRNA.					
Mus musculus	RefSeq	ILMN_221834	ILMN_221834	4930595M18RIK	NM_173435.2	NM_173435.2		245492	142382854	NM_173435.2	4930595M18Rik	NP_775611.1	ILMN_1248873	004120369	S	2251	CCACCTTTTGAGGCCAGGCAACAAATGCATGTTACAAGCCCAGAAACATC	X	-	78665258-78665307	XqB	Mus musculus RIKEN cDNA 4930595M18 gene (4930595M18Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192134	ILMN_192134	TRF	NM_133977.2	NM_133977.2		22041	118129942	NM_133977.2	Trf	NP_598738.1	ILMN_2485323	007040044	S	1491	CTGGGGTAGACAGAACCGCTGGTTGGAACATCCCTATGGGCATGCTGTAC	9	-	103119717-103119766	9qF1	Mus musculus transferrin (Trf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence ISO]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]	Cd176; hpx; Tfn; AI266983; MGC102653; HP	Cd176; hpx; Tfn; AI266983; MGC102653; HP
Mus musculus	RefSeq	ILMN_261889	ILMN_261889	COQ2	NM_027978.1	NM_027978.1		71883	62858752	NM_027978.1	Coq2	NP_082254.1	ILMN_3009260	006650224	S	1599	GAATCTCCTTGTGATCTGTACTCACTGCCAAAGCTGTAATTCAAGAAGCC	5	-	101083803-101083852	5qE4	Mus musculus coenzyme Q2 homolog, prenyltransferase (yeast) (Coq2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence ISO]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence ISO]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	2310002F18Rik; MGC91278	2310002F18Rik; MGC91278
Mus musculus	RefSeq	ILMN_205938	ILMN_312585	C130046B21RIK	XR_035323.1	XR_035323.1		442817	149248943	XR_035323.1	C130046B21Rik		ILMN_1213859	007100296	S	2935	GCGCAGGAGACTTCAAAACATATTTCAGGGCAGGGCACTTGTCTCAGTAG	2	+	21065479-21065528	2qA3	PREDICTED: Mus musculus RIKEN cDNA C130046B21 gene (C130046B21Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_194801	ILMN_230741	LOC636752	XM_912247.2	XM_912247.2		636752	94377634	XM_912247.2	LOC636752	XP_917340.2	ILMN_1220577	000020132	S	18	GATTTTCAGCTTCCTGCTAATCAGTGCCTCAGCCATACTGTCCAGAGGAC				6qC1	PREDICTED: Mus musculus similar to Ig kappa chain V-VI region NQ2-6.1 (LOC636752), mRNA.					
Mus musculus	RefSeq	ILMN_221678	ILMN_221678	EHBP1L1	NM_053252.2	NM_053252.2		114601	114158692	NM_053252.2	Ehbp1l1	NP_444482.2	ILMN_1227131	007210243	S	2585	TCACCCTGGTCAACAAGAAGAATGCGCTCATCCGGAGGCAGGACCAGCTG	19	-	5710218-5710267	19qA	Mus musculus EH domain binding protein 1-like 1 (Ehbp1l1), mRNA.				G430002G23Rik	G430002G23Rik
Mus musculus	RefSeq	ILMN_197036	ILMN_197036	LOC380779	XM_354692.1	XM_354692.1			38073617	XM_354692.1	LOC380779		ILMN_1239226	000130538	S	865	GAGGAAGTGACAAAACCCACAAGGAACACCAGTTGGAATCTATGGCTGCC										
Mus musculus	RefSeq	ILMN_222237	ILMN_251017	RNASEH2A	NM_027187.3	NM_027187.3		69724	142384190	NM_027187.3	Rnaseh2a	NP_081463.1	ILMN_2746721	006560008	S	816	CTGAAAGACCGGGAAAAATCACCTCCTACTTCAGCCAGGGCCCGCAGACC	8	-	87481687-87481736	8qC3	Mus musculus ribonuclease H2, large subunit (Rnaseh2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA in RNA-DNA hybrids to 5'-phosphomonoesters [goid 4523] [evidence IEA]	RNHIA; RNHL; 2400006P09Rik; RNASEHI	RNHIA; RNHL; 2400006P09Rik; RNASEHI
Mus musculus	RefSeq	ILMN_200381	ILMN_200381	LOC386379	XM_359193.1	XM_359193.1			38081478	XM_359193.1	LOC386379		ILMN_1230572	004880102	S	593	TTGACCACGTAAAGGATGATGGACCAGGACTGAGATCCCCCTACACCCGG										
Mus musculus	RefSeq	ILMN_209693	ILMN_209693	ZFP655	NM_028298.3	NM_028298.3		72611	118130475	NM_028298.3	Zfp655	NP_082574.1	ILMN_1219539	005550647	S	3764	CCTCTAGGGTAGTCCCACCACTGTATTTTACTTCTTTGCCATCAGCAAGC	5	+	146007867-146007916	5qG2	Mus musculus zinc finger protein 655 (Zfp655), transcript variant 1, mRNA.				2700038I16Rik; mKIAA4222; KIAA4222; 9030409O18Rik	2700038I16Rik; mKIAA4222; KIAA4222; 9030409O18Rik
Mus musculus	MEEBO	ILMN_193544	ILMN_193544	IGHV1S104_L33943_IG_HEAVY_VARIABLE_1S104_100	IGHV1S104_L33943_Ig_heavy_variable_1S104_100						IGHV1S104_L33943_Ig_heavy_variable_1S104_100		ILMN_1223225	006200040	S	19	CCTGCATGGCTTCTGGTTATTCATTCAGTGACTACTACATGCACTGAGTG										
Mus musculus	RefSeq	ILMN_211322	ILMN_240164	5730406M06RIK	XM_920534.2	XM_920534.2		66625	94371519	XM_920534.2	5730406M06Rik	XP_925627.1	ILMN_2614644	002940376	S	2907	GATCGCGCTCCCTGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGC				4qA3	PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 32 (5730406M06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_251896	ILMN_251896	S100PBP	NM_029036.1	NM_029036.1		74648	62899072	NM_029036.1	S100pbp	NP_083312.1	ILMN_2780454	000360634	S	1248	GACTGGCAGCATCCTTCAGATCTTACCACACGAAACTACGCCCGGTTCCG	4	-	128653377-128653395:128657729-128657759	4qD2.2	Mus musculus S100P binding protein (S100pbp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			4930429A08Rik; S100pbpr; AI851343	4930429A08Rik; S100pbpr; AI851343
Mus musculus	RefSeq	ILMN_221329	ILMN_221329	5630401D24RIK	NM_144877.1	NM_144877.1		71449	21536261	NM_144877.1	5630401D24Rik	NP_659126.1	ILMN_2993779	001230324	S	2515	AAGCTGGCTCCCCAGCCCCCATGGCTCCTTTGGATGATGGTAGAACTTGG	1	-	164464028-164464077	1qH2.1	Mus musculus RIKEN cDNA 5630401D24 gene (5630401D24Rik), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221329	ILMN_221329	5630401D24RIK	NM_144877.1	NM_144877.1		71449	21536261	NM_144877.1	5630401D24Rik	NP_659126.1	ILMN_1218104	006060152	S	2619	GGACACTGGCCCGCCTCTTTGCCTTTTGGCTGCTGTCAAGTGAAGAACTC	1	-	164463924-164463973	1qH2.1	Mus musculus RIKEN cDNA 5630401D24 gene (5630401D24Rik), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221329	ILMN_221329	5630401D24RIK	NM_144877.1	NM_144877.1		71449	21536261	NM_144877.1	5630401D24Rik	NP_659126.1	ILMN_2740461	005290411	S	71	CGCCGCTCACGGTGGGAACATGAATCTCCTACCTAAAAGCTCCAAGGAGT	1	-	164478356-164478387:164478388-164478405	1qH2.1	Mus musculus RIKEN cDNA 5630401D24 gene (5630401D24Rik), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221329	ILMN_221329	5630401D24RIK	NM_144877.1	NM_144877.1		71449	21536261	NM_144877.1	5630401D24Rik	NP_659126.1	ILMN_2993782	005960706	S	2330	ATGGGAGGCAGCATGGGGGTGATGATGAAAGCCGGGTGGTGGTAGCACAG	1	-	164464213-164464262	1qH2.1	Mus musculus RIKEN cDNA 5630401D24 gene (5630401D24Rik), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221329	ILMN_221329	5630401D24RIK	NM_144877.1	NM_144877.1		71449	21536261	NM_144877.1	5630401D24Rik	NP_659126.1	ILMN_2754492	001980044	S	1317	TACTTTCGGCGGCTCATCTTCCTCAGCAACAGGAACGTGGTGCAGTCGGA	1	-	164472420-164472469	1qH2.1	Mus musculus RIKEN cDNA 5630401D24 gene (5630401D24Rik), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217040	ILMN_217040	4933405I11RIK	scl0074074.1_138	NM_183101.1			34147076	NM_183101.1	4933405I11Rik		ILMN_2678444	005270300	S	1109	ACAAACCAGACTCTACCTGTTTCGTAGACTGGGGGTACAGGAAAAGGCCA										
Mus musculus	RefSeq	ILMN_224009	ILMN_228464	IL5RA	NM_008370.2	NM_008370.2		16192	118130832	NM_008370.2	Il5ra	NP_032396.1	ILMN_2773153	004490296	S	3020	GTGTTGGGAAGAGGAATAAGTAGTGATAGAGGGACCTAGTGGTGGTTATT	6	-	106660856-106660905	6qE1	Mus musculus interleukin 5 receptor, alpha (Il5ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	CDw125; Il5r; CD125	CDw125; Il5r; CD125
Mus musculus	RefSeq	ILMN_211644	ILMN_211644	ACTRT1	NM_028514.2	NM_028514.2		73360	142370294	NM_028514.2	Actrt1	NP_082790.1	ILMN_2618100	004150068	S	1095	CAGCTTCCTCAGACAGATGTTATTCGGCTTGGATTGGTGGATCTGTCATG	X	+	43683278-43683327	XqA4	Mus musculus actin-related protein T1 (Actrt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISS]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700061J02Rik; MGC144638; MGC144637; Arp-T1	1700061J02Rik; MGC144638; MGC144637; Arp-T1
Mus musculus	RefSeq	ILMN_220422	ILMN_220422	TXNDC16	NM_172597.2	NM_172597.2		70561	142372751	NM_172597.2	Txndc16	NP_766185.1	ILMN_2721837	003190386	S	3940	GGAGTCTTAAGTGAGCCCTTATCTCTCTAAGTTAGAATGCTAAGTTTCAG	14	-	45754161-45754210	14qC1	Mus musculus thioredoxin domain containing 16 (Txndc16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		C77647	C77647
Mus musculus	RefSeq	ILMN_211964	ILMN_211964	BIVM	NM_144558.3	NM_144558.3		246229	142363741	NM_144558.3	Bivm	NP_653141.2	ILMN_2621245	003940008	S	3146	GTCCTGTTTCTGAAGAGGTTCTTTAGCTTGAAATGTAAAGGACTGAAAGA	1	+	44201230-44201279	1qC1.1	Mus musculus basic, immunoglobulin-like variable motif containing (Bivm), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI854267	AI854267
Mus musculus	Riken	ILMN_206461	ILMN_206461	ZFH4-PENDING	ri|D230009H13|PX00187J02|AK084213|2194					AK084213	Zfh4-pending		ILMN_1257715	002060056	S	1889	GTAGCTAAGGGGGTCTGGCATGGCTGGGCTGTGTGCCATGGTTTTCTCTG										
Mus musculus	RefSeq	ILMN_223991	ILMN_258854	BEX2	XM_977338.1	XM_977338.1		12069	94408188	XM_977338.1	Bex2	XP_982432.1	ILMN_1232107	003290747	S	496	CCCATGGGGCTCCAACTTCTGCCAGCTTCTAATTGAAACTTGTGTTTTCG				XqF1	PREDICTED: Mus musculus brain expressed X-linked 2 (Bex2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	MEEBO	ILMN_192187	ILMN_192187	DTYMK	scl16457.5.1_7				12963516	NM_023136	Dtymk		ILMN_2485788	000940170	S	18	GAGGAAGTCCATAAAGAAATCCGTGCACACTCTGAGGACGCCATCCGAAA							The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate [goid 4798] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192187	ILMN_192187	DTYMK	scl16457.5.1_7				12963516	NM_023136	Dtymk		ILMN_2485787	000630441	S	17	TGAGGAAGTCCATAAAGAAATCCGTGCACACTCTGAGGACGCCATCCGAA							The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate [goid 4798] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223124	ILMN_223124	1110032A13RIK	NM_199197.1	NM_199197.1		68731	40353223	NM_199197.1	1110032A13Rik	NP_954667.1	ILMN_2955214	003710678	S	1253	ACTGCACCTGCAGACCTCCGCAGCCAGTCCTCAGCGATTGGTACCTACCT	18	-	80389039-80389088	18qE3	Mus musculus RIKEN cDNA 1110032A13 gene (1110032A13Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		AI595940	AI595940
Mus musculus	RefSeq	ILMN_223124	ILMN_223124	1110032A13RIK	NM_199197.1	NM_199197.1		68731	40353223	NM_199197.1	1110032A13Rik	NP_954667.1	ILMN_2759652	001300500	S	818	GAGTACAAACGCAAGAAGGAGCGAGGGCTTCAGTGTCAGAGTCTGGCGCC	18	-	80389474-80389523	18qE3	Mus musculus RIKEN cDNA 1110032A13 gene (1110032A13Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		AI595940	AI595940
Mus musculus	RefSeq	ILMN_216811	ILMN_256906	LOC328482	XM_903581.2	XM_903581.2		328482	94397480	XM_903581.2	LOC328482	XP_908674.2	ILMN_2675667	005420379	S	252	CAGTCCTGGGGATACACTTTCTCCTGAGAGATGCCCAAGCTCAGTCAGTG				14qC2	PREDICTED: Mus musculus similar to RIKEN cDNA A430107P09 gene (LOC328482), mRNA.					
Mus musculus	MEEBO	ILMN_191284	ILMN_191284	SLC24A4	scl42861.16_141				26024350	NM_172152	Slc24a4		ILMN_1219643	005690546	S	1721	ACCGGAAACTGGGCATCTACGTGCTGGTCCTCTATGCTGTCTTCCTGTGC						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + K+(in) + Na+(out) = Ca2+(out) + K+(out) + Na+(in) [goid 8273] [evidence ISA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence ISA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200376	ILMN_200376	LOC386368	XM_359187.1	XM_359187.1			38081466	XM_359187.1	LOC386368		ILMN_1221713	004890189	S	920	CAGCAGTTGACATGCAGAGTGGAGGAGGGAAATCCCAAAAGGCTCTGCCC										
Mus musculus	RefSeq	ILMN_197561	ILMN_197561	LOC381452	XM_358584.1	XM_358584.1			38076569	XM_358584.1	LOC381452		ILMN_2528559	001410121	S	363	CATGATGACCCACAGACCCAGACAAGGCACTCAGAGGCAGCCCAGACTAC										
Mus musculus	RefSeq	ILMN_202075	ILMN_249059	1700112E06RIK	XM_920730.2	XM_920730.2		76633	94396668	XM_920730.2	1700112E06Rik	XP_925823.1	ILMN_1233120	000050504	S	1328	CCCAGTAGGAGGTCCCTTCTGTTGCTTTGTGCTTGAGGAGTCTGGGAGGG				14qA3	PREDICTED: Mus musculus RIKEN cDNA 1700112E06 gene, transcript variant 5 (1700112E06Rik), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209603	ILMN_209603	CKLF	NM_029295.2	NM_029295.2		75458	142368069	NM_029295.2	Cklf	NP_083571.1	ILMN_2597376	005390747	S	563	GACAGAGAATAATTTTGTACTTATTTTTTACTACTTATTAAACTAATTAT	8	+	106787285-106787296:106787297-106787334	8qD3	Mus musculus chemokine-like factor (Cklf), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	UCK-1; CKLF1; CKLF4; Cklf2; CKLF3; C32; 1810018M11Rik; CKLF5; 1700001C14Rik; Cklf6; HSPC224	UCK-1; CKLF1; CKLF4; Cklf2; CKLF3; C32; 1810018M11Rik; CKLF5; 1700001C14Rik; Cklf6; HSPC224
Mus musculus	MEEBO	ILMN_222412	ILMN_222412	ATR	scl36601.18.1_52	XM_356175.1			38090006	XM_356175.1	Atr		ILMN_1242893	002260333	S	210	GGGCTGCCATTATCTATTGAAGGACATGTGCATTACCTCATACAAGAAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein binding [goid 43393] [evidence IDA]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence TAS]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the mismatch repair complex MutLalpha [goid 32405] [evidence ISO]; Interacting selectively with the mismatch repair complex MutSalpha [goid 32407] [evidence ISO]		
Mus musculus	Riken	ILMN_204525	ILMN_204525	B230387C07RIK	ri|B230387C07|PX00161B10|AK046455|1022					AK046455	B230387C07Rik		ILMN_1216085	006580414	S	837	ACAGAGAAGGAGGCCGAGTGCTGTTCGGTGGGTGTCAGTGTGAGCCAGGA										
Mus musculus	RefSeq	ILMN_212217	ILMN_212217	OLFR1009	NM_146572.1	NM_146572.1		258565	22129498	NM_146572.1	Olfr1009	NP_666783.1	ILMN_1246691	000670189	S	602	TCGTGGCAGGCGCTGTATTGATTGTCAGTAGTACCACCATCATAGTCTCC	2	+	85562165-85562214	2qD	Mus musculus olfactory receptor 1009 (Olfr1009), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR175-3	MOR175-3
Mus musculus	RefSeq	ILMN_198401	ILMN_198401	MS4A12	XM_355147.5	XM_355147.5		381213	149270605	XM_355147.5	Ms4a12	XP_355147.5	ILMN_1256135	000380446	S	556	CAAGACTACTGGATGGTGCTTTCTGGGAGAGGAATTGCAGGTGTGCTGGC				19qA	PREDICTED: Mus musculus membrane-spanning 4-domains, subfamily A, member 12 (Ms4a12), mRNA.					
Mus musculus	RefSeq	ILMN_211847	ILMN_211847	DAP3	NM_022994.2	NM_022994.2		65111	42734455	NM_022994.2	Dap3	NP_075370.1	ILMN_2620078	006200176	S	1659	GCGCATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTG	3	-	88727644-88727693	3qF1	Mus musculus death associated protein 3 (Dap3), nuclear gene encoding mitochondrial protein, mRNA.	The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		DAP-3; 4921514D13Rik	DAP-3; 4921514D13Rik
Mus musculus	RefSeq	ILMN_211847	ILMN_211847	DAP3	NM_022994.2	NM_022994.2		65111	42734455	NM_022994.2	Dap3	NP_075370.1	ILMN_2953910	001940577	S	1789	GCTCCTGAGTGCTGTATTGGATTTGCAACAAGGAAGGTTCTCACCCTGGC	3	-	88727514-88727563	3qF1	Mus musculus death associated protein 3 (Dap3), nuclear gene encoding mitochondrial protein, mRNA.	The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		DAP-3; 4921514D13Rik	DAP-3; 4921514D13Rik
Mus musculus	RefSeq	ILMN_211847	ILMN_211847	DAP3	NM_022994.2	NM_022994.2		65111	42734455	NM_022994.2	Dap3	NP_075370.1	ILMN_2646230	006060497	S	625	GGATCTGAAGACAGTGTTTCCTCACGGCCTGCCTCCTCGGTACATGATGC	3	-	88737488-88737537	3qF1	Mus musculus death associated protein 3 (Dap3), nuclear gene encoding mitochondrial protein, mRNA.	The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		DAP-3; 4921514D13Rik	DAP-3; 4921514D13Rik
Mus musculus	RefSeq	ILMN_211847	ILMN_211847	DAP3	NM_022994.2	NM_022994.2		65111	42734455	NM_022994.2	Dap3	NP_075370.1	ILMN_2722542	006100014	S	1673	CCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATATGAAATG	3	-	88727630-88727679	3qF1	Mus musculus death associated protein 3 (Dap3), nuclear gene encoding mitochondrial protein, mRNA.	The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		DAP-3; 4921514D13Rik	DAP-3; 4921514D13Rik
Mus musculus	RefSeq	ILMN_220700	ILMN_220700	OLFR1166	NM_146650.2	NM_146650.2		258644	56118304	NM_146650.2	Olfr1166	NP_666861.2	ILMN_2913855	005910647	S	1065	GAGATACATTGAGAGGCAAAGAGTGGTAAGAGTTGGGTGGGAGACTGTAG	2	-	87964036-87964085	2qD	Mus musculus olfactory receptor 1166 (Olfr1166), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR174-6	MOR174-6
Mus musculus	RefSeq	ILMN_223964	ILMN_241883	COPB1	NM_033370.3	NM_033370.3		70349	118130810	NM_033370.3	Copb1	NP_203534.1	ILMN_1254563	006480537	S	3200	CTGAATGCTGTCCTCAAAGTATATAATGTTTCTCATATGTACCAAGACCA	7	-	121359138-121359187	7qF1	Mus musculus coatomer protein complex, subunit beta 1 (Copb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2610019B04Rik	2610019B04Rik
Mus musculus	RefSeq	ILMN_201247	ILMN_201247	SUSD5	XM_356198.5	XM_356198.5		382111	94386581	XM_356198.5	Susd5	XP_356198.3	ILMN_2541618	004220138	S	1848	GGCCAGCTCCACCCAAGAGACAGTAACAACAACCCTCCAGCCGACACATA	9	+	114005611-114005660	9qF3	PREDICTED: Mus musculus sushi domain containing 5 (Susd5), mRNA.					
Mus musculus	RefSeq	ILMN_210281	ILMN_210281	SPATA7	NM_178914.3	NM_178914.3		104871	31982534	NM_178914.3	Spata7	NP_849245.2	ILMN_1257003	004260278	S	248	TCTCAGACTAAGCACCCTGCAGCTGGTCAAGAACCACATGGCTATTCACT	12	+	99872455-99872504	12qE	Mus musculus spermatogenesis associated 7 (Spata7), mRNA.				AI661438; B230306G18Rik; HSD3	AI661438; B230306G18Rik; HSD3
Mus musculus	RefSeq	ILMN_210281	ILMN_210281	SPATA7	NM_178914.3	NM_178914.3		104871	31982534	NM_178914.3	Spata7	NP_849245.2	ILMN_2691469	004260762	S	250	CTCAGACTAAGCACCCTGCAGCTGGTCAAGAACCACATGGCTATTCACTA	12	+	99872457-99872506	12qE	Mus musculus spermatogenesis associated 7 (Spata7), mRNA.				AI661438; B230306G18Rik; HSD3	AI661438; B230306G18Rik; HSD3
Mus musculus	MEEBO	ILMN_188154	ILMN_188154	SCL0003711.1_47	scl0003711.1_47	AK038963.1			26086862	AK038963.1	scl0003711.1_47		ILMN_1257437	004070463	S	17	CCTGCAGTCGTTCTCGCGGAAACGGCCGCGGGCTGACCCCGCCCTCTGCC										
Mus musculus	RefSeq	ILMN_190582	ILMN_216213	SLC25A32	NM_172402.2	NM_172402.2		69906	141802666	NM_172402.2	Slc25a32	NP_765990.1	ILMN_1222295	003850524	S	221	AGGTTCTCGTACCGGACGTGGCGGAACACCGCGCTCCACGCCGCCGACCC	15	-	38943920-38943969	15qB3.1	Mus musculus solute carrier family 25, member 32 (Slc25a32), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Mftc; 2610043O12Rik	Mftc; 2610043O12Rik
Mus musculus	RefSeq	ILMN_216213	ILMN_216213	SLC25A32	NM_172402.2	NM_172402.2		69906	141802666	NM_172402.2	Slc25a32	NP_765990.1	ILMN_1235842	004880309	S	2709	GCATGGGGTTCACCTTGATACTTATGTCTGTATGGGAAGGCAAGCTATGG	15	-	38925851-38925900	15qB3.1	Mus musculus solute carrier family 25, member 32 (Slc25a32), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Mftc; 2610043O12Rik	Mftc; 2610043O12Rik
Mus musculus	RefSeq	ILMN_216213	ILMN_216213	SLC25A32	NM_172402.2	NM_172402.2		69906	141802666	NM_172402.2	Slc25a32	NP_765990.1	ILMN_2747302	004810767	S	171	CGGGTCGGCGGCGTGGAGCGCGGTGTTCCGCCACGTCCGGTACGAGAACC	15	-	38943970-38944019	15qB3.1	Mus musculus solute carrier family 25, member 32 (Slc25a32), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Mftc; 2610043O12Rik	Mftc; 2610043O12Rik
Mus musculus	RefSeq	ILMN_208712	ILMN_208712	NCOA6	NM_019825.2	NM_019825.2		56406	145587670	NM_019825.2	Ncoa6	NP_062799.2	ILMN_1217617	002680093	S	6536	GAAGTTCAAGGCTTCTAAAATGTTGCCATGTATTGAAAGGCGCTAATGCC				2qH1	Mus musculus nuclear receptor coactivator 6 (Ncoa6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AIB3; mKIAA0181; ASC2; ASC-2; RAP250; Ncoa7; PRIP; NRC; MGC90663	AIB3; mKIAA0181; ASC2; ASC-2; RAP250; Ncoa7; PRIP; NRC; MGC90663
Mus musculus	RefSeq	ILMN_208712	ILMN_208712	NCOA6	NM_019825.2	NM_019825.2		56406	145587670	NM_019825.2	Ncoa6	NP_062799.2	ILMN_1229545	006840228	S	5912	CCACATTGGTACCCTCTGAGCTCATCTCCACAGCGCCAACCACAAAAGGC				2qH1	Mus musculus nuclear receptor coactivator 6 (Ncoa6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AIB3; mKIAA0181; ASC2; ASC-2; RAP250; Ncoa7; PRIP; NRC; MGC90663	AIB3; mKIAA0181; ASC2; ASC-2; RAP250; Ncoa7; PRIP; NRC; MGC90663
Mus musculus	MEEBO	ILMN_195994	ILMN_195994	4930539A06RIK	scl0078261.1_311				51710916	XM_194204	4930539A06Rik		ILMN_2520651	003390379	S	17	AAGCCCGTGGGTGTGTACTGTACCTGTGAGAAGGAGGGGCGAGCCTTCAT										
Mus musculus	MEEBO	ILMN_222364	ILMN_222364	FSHPRH1	scl0102920.22_45	NM_145924.1			22122336	NM_145924.1	Fshprh1		ILMN_2748499	000070711	S	2949	CGGGTAGCTCATGCTTCCCGGGGCCTGTATTGGCAGTAAGTTTATGAGGG										
Mus musculus	RefSeq	ILMN_204801	ILMN_223159	MGA	NM_013720.2	NM_013720.2		29808	120444913	NM_013720.2	Mga	NP_038748.2	ILMN_1222658	006400390	S	3078	GATTAGTTTGCGGCAGGCCCAGCAACAGCACCTTCAGCAGCAAGGAACTC	2	+	119749639-119749688	2qE5	Mus musculus MAX gene associated (Mga), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	Mad5; AV312082; C80739; D030062C11Rik; C130042M01Rik	Mad5; AV312082; C80739; D030062C11Rik; C130042M01Rik
Mus musculus	RefSeq	ILMN_197293	ILMN_197293	LOC268686	XM_193738.2	XM_193738.2			38075031	XM_193738.2	LOC268686		ILMN_2527614	000670209	S	561	AAAAGGAAGTGTCACGGGGCAGATTGCTCTTGGCCTGATACACAGTCTGC										
Mus musculus	MEEBO	ILMN_210575	ILMN_210575	2610027F03RIK	scl17553.5.1_1	XM_129392.1			20910028	XM_129392.1	2610027F03Rik		ILMN_1225514	006660040	S	535	CCCTGGGTTTCTGGTGAGAAGGAGCCACAAATCTAAGCCAGGATGATCTC										
Mus musculus	RefSeq	ILMN_200308	ILMN_200308	LOC386194	XM_359112.1	XM_359112.1			38081274	XM_359112.1	LOC386194		ILMN_2538307	001850014	S	311	GGACAGCTCGCCCATGTTCATACCCTCGGGCTGTTTCACCAGCAATACTC										
Mus musculus	RefSeq	ILMN_217772	ILMN_217772	FCGR3	NM_010188.4	NM_010188.4		14131	76150626	NM_010188.4	Fcgr3	NP_034318.1	ILMN_2687403	003830678	S	909	CCACACAGCCTTCCTTTGAAAGCAACTTACAAGCAGGCCGGGATGTTTGG	1	-	172981689-172981738	1qH3	Mus musculus Fc receptor, IgG, low affinity III (Fcgr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence IMP]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IMP]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IDA]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence IMP]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 42590] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IMP]; Cytolysis of target cells by natural killer cells, eosinophils, neutrophils, monocytes, or macrophages following engagement of antibodies bound to the target cells by Fc receptors on the effector cells [goid 1788] [evidence IMP]; The regulated release of serotonin by a cell or group of cells. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells [goid 1820] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of type I hypersensitivity, a type of inflammatory response [goid 1812] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of type I hypersensitivity, a type of inflammatory response [goid 1812] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of type IIa hypersensitivity, a type of inflammatory response [goid 1798] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of type III hypersensitivity, a type of inflammatory response [goid 1805] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an immunoglobulin of an IgG isotype via the Fc region to initiate a change in cell activity [goid 19770] [evidence IMP]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IMP]	CD16	CD16
Mus musculus	Riken	ILMN_202695	ILMN_202695	HIPK2	ri|4930579N05|PX00036F08|AK019821|677					AK019821	Hipk2		ILMN_1253938	006110228	S	380	GCTCATAGGTCTGTCACCGGAGTCCTAGCAGCTCTTCCCAAGGGATACAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system that can be controlled at will [goid 50882] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_184724	ILMN_224970	9530003J23RIK	NM_029906.2	NM_029906.2		77397	142352889	NM_029906.2	9530003J23Rik	NP_084182.1	ILMN_1216092	002120386	S	917	CAGCTCCGGTGGTATCTGAGGCCTTCGTCAGTTCAAATTACTCTAAAACC	10	-	116670986-116671035	10qD2	Mus musculus RIKEN cDNA 9530003J23 gene (9530003J23Rik), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212297	ILMN_212297	RAP2A	NM_029519.3	NM_029519.3		76108	118130630	NM_029519.3	Rap2a	NP_083795.2	ILMN_2624862	002480288	S	3540	GCCTTCTAGGTGTTTCTGTACACCGTGAGAGGTGCTTTGAACTCCCACCC	14	+	120905782-120905831	14qE4	Mus musculus RAS related protein 2a (Rap2a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	5830461H18Rik	5830461H18Rik
Mus musculus	RefSeq	ILMN_216383	ILMN_238779	ECE1	NM_199307.1	NM_199307.1		230857	40556285	NM_199307.1	Ece1	NP_955011.1	ILMN_1255063	006450133	S	2195	AGCAGACGCTGCCCACCCTGGGTCTCACCAGCAACCAGCTCTTCTTCCTA	4	+	137517592-137517641	4qD3	Mus musculus endothelin converting enzyme 1 (Ece1), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]	The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence ISS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISS]	AW322500; ECE-1d; ECE-1a; ECE-1b	AW322500; ECE-1d; ECE-1a; ECE-1b
Mus musculus	RefSeq	ILMN_216383	ILMN_238779	ECE1	NM_199307.1	NM_199307.1		230857	40556285	NM_199307.1	Ece1	NP_955011.1	ILMN_2745993	005700722	S	4463	ATTGCTCAGGGTGTGCAGGGAGCCAAGGCAGGAAGACGCAGACTGGTTAG	4	+	137520851-137520900	4qD3	Mus musculus endothelin converting enzyme 1 (Ece1), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]	The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence ISS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISS]	AW322500; ECE-1d; ECE-1a; ECE-1b	AW322500; ECE-1d; ECE-1a; ECE-1b
Mus musculus	RefSeq	ILMN_185000	ILMN_185000	V1RA7	NM_053222.1	NM_053222.1		113849	21361225	NM_053222.1	V1ra7	NP_444452.1	ILMN_2423356	004570632	S	5	CCTCTTCTGGTTCTCAGTAATGAAAAACGTATAACTAACCTGTTGATATC	6	+	90128714-90128763	6qD1	Mus musculus vomeronasal 1 receptor, A7 (V1ra7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]	VN3	VN3
Mus musculus	RefSeq	ILMN_211767	ILMN_211767	PRKD2	NM_178900.2	NM_178900.2		101540	31343612	NM_178900.2	Prkd2	NP_849231.1	ILMN_2870320	002260424	S	3450	CTCCTTCCGTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGC	7	+	16028808-16028857	7qA2	Mus musculus protein kinase D2 (Prkd2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	AI325941; PKD2	AI325941; PKD2
Mus musculus	RefSeq	ILMN_188717	ILMN_226880	4921504E06RIK	NM_027600.4	NM_027600.4		70909	146141170	NM_027600.4	4921504E06Rik	NP_081876.2	ILMN_2691910	007320102	S	1608	GGACCCCAGCAATGAGAACACACGCAGTGATCAGGTGTTTCCAGGAGTCA				2qA3	Mus musculus RIKEN cDNA 4921504E06 gene (4921504E06Rik), mRNA.				RP24-189E15.1; 4921522E24Rik	RP24-189E15.1; 4921522E24Rik
Mus musculus	RefSeq	ILMN_198402	ILMN_198402	LOC381214	XM_355148.1	XM_355148.1			38084859	XM_355148.1	LOC381214		ILMN_1243042	004040521	S	538	TCCAGTAACTCCCTGGACACATCTCCTGTTAGAGAAGTCCAGTGGTCTAG										
Mus musculus	Riken	ILMN_205158	ILMN_205158	PHIP	ri|A630042G05|PX00145D10|AK041857|3285					AK041857	Phip		ILMN_1234202	003870189	S	2807	GCTAGGGTAACTGGGGTTGGAGAGTTAGCCCTGGGAAGGTGAGTTAGGAC							The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_206941	ILMN_206941	D630016P04RIK	ri|D630016P04|PX00196L09|AK085367|2247					AK085367	D630016P04Rik		ILMN_1214620	000510681	S	2190	ACCTAGCATGTGCAACGCCCTGAGTTGATCTCCAAGCACCAAGAAGGACC										
Mus musculus	RefSeq	ILMN_216444	ILMN_216444	MRGPRH	NM_030726.1	NM_030726.1		80978	13507681	NM_030726.1	Mrgprh	NP_109651.1	ILMN_2671160	003520563	S	1689	GCAGCCTGAGGAGGAAGAGGAGTAGGAAGTCCCTAAAAGAAGCACTGCAG	17	+	13070588-13070637	17qA1	Mus musculus MAS-related GPR, member H (Mrgprh), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpr90; MrgH	Gpr90; MrgH
Mus musculus	RefSeq	ILMN_211260	ILMN_211260	RNF111	NM_033604.2	NM_033604.2		93836	118130811	NM_033604.2	Rnf111	NP_291082.1	ILMN_2700945	003420671	S	4654	CCACTTCAGGATGCATATTAGCAAGATACTTTCATATACAGGATAGCCTA	9	-	70273412-70273461	9qD	Mus musculus ring finger 111 (Rnf111), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARK; Arkadia	ARK; Arkadia
Mus musculus	RefSeq	ILMN_211260	ILMN_211260	RNF111	NM_033604.2	NM_033604.2		93836	118130811	NM_033604.2	Rnf111	NP_291082.1	ILMN_2614080	002600008	S	2820	ACCTGGCCCATTACCACGCCCCGCCTCGACTTCATCACCTCCAGTTAGGA	9	-	70288576-70288625	9qD	Mus musculus ring finger 111 (Rnf111), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARK; Arkadia	ARK; Arkadia
Mus musculus	RefSeq	ILMN_211260	ILMN_211260	RNF111	NM_033604.2	NM_033604.2		93836	118130811	NM_033604.2	Rnf111	NP_291082.1	ILMN_1252738	006400161	S	3053	TATCCACATAAATATAAAAAGGTAACAACTGATTGGTTCTCACAGAGGAA	9	-	70277457-70277486:70278738-70278757	9qD	Mus musculus ring finger 111 (Rnf111), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARK; Arkadia	ARK; Arkadia
Mus musculus	RefSeq	ILMN_262042	ILMN_262042	BTBD16	NM_001081038.1	NM_001081038.1		330660	124486657	NM_001081038.1	Btbd16	NP_001074507.1	ILMN_2825826	006580608	S	121	CAGCAAAGCATCGCCGTAGGAGAAGGGGTGAGCCCCAGGTGTCATGAGAG	7	+	137917703-137917752	7qF3	Mus musculus BTB (POZ) domain containing 16 (Btbd16), mRNA.				E330040A16Rik	E330040A16Rik
Mus musculus	RefSeq	ILMN_216975	ILMN_216975	HSPB7	NM_013868.4	NM_013868.4		29818	146149132	NM_013868.4	Hspb7	NP_038896.2	ILMN_2677662	006480612	S	2537	AACCAGATCTCTTCTGGCCCCCAAATTCAGGGCAAAAACCCTTGTCAGCC				4qE1	Mus musculus heat shock protein family, member 7 (cardiovascular) (Hspb7), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]		Hsp25-2; MGC107591; cvHsp; 27kDa	Hsp25-2; MGC107591; cvHsp; 27kDa
Mus musculus	RefSeq	ILMN_213788	ILMN_213788	FZD10	NM_175284.3	NM_175284.3		93897	41282225	NM_175284.3	Fzd10	NP_780493.1	ILMN_2976821	006200634	S	2877	GACAAACTTTGTCTCCAGCCAGGGAGGGCCATGCCTGCCTCTGTATATCT	5	+	129109857-129109906	5qG1.3	Mus musculus frizzled homolog 10 (Drosophila) (Fzd10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4926] [evidence IEA]	Fz-10	Fz-10
Mus musculus	RefSeq	ILMN_213788	ILMN_213788	FZD10	NM_175284.3	NM_175284.3		93897	41282225	NM_175284.3	Fzd10	NP_780493.1	ILMN_2670576	001510451	S	2173	GGCCTCAAGCACACAGCTGTGTATTCAGAAGGCTTTGCTGCCTGTGCATA	5	+	129109153-129109202	5qG1.3	Mus musculus frizzled homolog 10 (Drosophila) (Fzd10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4926] [evidence IEA]	Fz-10	Fz-10
Mus musculus	RefSeq	ILMN_213788	ILMN_213788	FZD10	NM_175284.3	NM_175284.3		93897	41282225	NM_175284.3	Fzd10	NP_780493.1	ILMN_2640796	000380551	S	1885	GGACATTCGGAGCCCAAATGGGCAGCTTTTCTTGGTTGGCTGGTTGTTGG	5	+	129108865-129108914	5qG1.3	Mus musculus frizzled homolog 10 (Drosophila) (Fzd10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4926] [evidence IEA]	Fz-10	Fz-10
Mus musculus	Riken	ILMN_202780	ILMN_202780	FOXP1	ri|6330416B21|PX00008B10|AK031837|2652					AK031837	Foxp1		ILMN_2552236	004850148	S	1802	CCAGGCACAAGAGGACCCTTGATGATCTGTCACCCTGTGGACCTGCTAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IGI]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IGI]; Any process that activates or increases the frequency, rate, or extent of immunoglobulin production [goid 2639] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments [goid 2329] [evidence IMP]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]		
Mus musculus	RefSeq	ILMN_253112	ILMN_253112	TIMM17B	NM_011591.2	NM_011591.2		21855	34328196	NM_011591.2	Timm17b	NP_035721.1	ILMN_2824012	003460433	S	1490	TGCACACTTTAATCCAGCCCAGAGCAGCACAGAGGCCGAAGCGGAGACAC	X	+	7064460-7064509	XqA1.1	Mus musculus translocase of inner mitochondrial membrane 17b (Timm17b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	mTim17b; 17kDa; Sfc3	mTim17b; 17kDa; Sfc3
Mus musculus	RefSeq	ILMN_219554	ILMN_219554	SLFNL1	NM_177570.3	NM_177570.3		194219	141802787	NM_177570.3	Slfnl1	NP_808238.1	ILMN_1245376	004290431	S	1630	GATGTGGGCTAAGACTTGGAGTAAAACCTACCTGGGCCACCTCCTCTCCC	4	+	120209134-120209183	4qD2.2	Mus musculus schlafen like 1 (Slfnl1), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4933406A14Rik; RP23-106K5.2	4933406A14Rik; RP23-106K5.2
Mus musculus	Riken	ILMN_207251	ILMN_207251	CD69	ri|F830023J24|PL00006K02|AK089801|1842					AK089801	Cd69		ILMN_2586179	003870253	S	1751	GTGTATGTGTGTGAAAAGGAAGGCAGGGGAAAACAGACCTAGGCAGGATC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186889	ILMN_186889	ETOHD3	scl0013997.1_84						Etohd3		ILMN_2439377	000510753	S	12	ATCACAACACCTTCAATTTCAGAAACAACTCACAAAATGATAAAAAATGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_217383	ILMN_217383	ARID1A	scl0093760.1_64	NM_033566.1			15808995	NM_033566.1	Arid1a		ILMN_1229829	006620382	S	5915	CACCTGCTACCCTCAGGACCCCACCCTATTTGAAAAGACAAAGCTCTGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence IDA]	Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence IPI]			
Mus musculus	Riken	ILMN_201969	ILMN_201969	1300010F03RIK	ri|1300010F03|R000011E04|AK004956|3238					AK004956	1300010F03Rik		ILMN_2546004	006400543	S	2423	CCCCTTCATGACTGCCCAAGGGGCTTCTAGTCAGAAAAGGAAGGAAGCTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189459	ILMN_237367	SLC6A9	NM_008135.4	NM_008135.4		14664	116686111	NM_008135.4	Slc6a9	NP_032161.2	ILMN_2667384	005130687	S	3195	CCCGCCGCTGCCCAGTGTGTGCAGAACTAGGGTTTTAAAGTCCGTAGGTT	4	+	117541833-117541882	4qD2.1	Mus musculus solute carrier family 6 (neurotransmitter transporter, glycine), member 9 (Slc6a9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of glycine, aminoethanoic acid, into, out of, within or between cells [goid 15816] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + Na+(out) = amino acid(in) + Na+(in) [goid 5283] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of glycine from one side of a membrane to the other. Glycine is aminoethanoic acid [goid 15187] [evidence IDA]	Glyt-1; Glyt1	Glyt-1; Glyt1
Mus musculus	RefSeq	ILMN_217864	ILMN_217864	OLFR52	NM_146583.1	NM_146583.1		18352	22208857	NM_146583.1	Olfr52	NP_666794.1	ILMN_2688543	000010484	S	566	GCTCAGATACTCACTACAAGCAGCTGTCTATTTTGGCCTGTGCTGGAATC	2	-	86021651-86021700	2qD	Mus musculus olfactory receptor 52 (Olfr52), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	ORL446; IE6; MOR185-6	ORL446; IE6; MOR185-6
Mus musculus	RefSeq	ILMN_197655	ILMN_197655	LOC380968	XM_354877.1	XM_354877.1			38077147	XM_354877.1	LOC380968		ILMN_2528892	002900332	S	125	ACCCCAAGTGGAAGGGTGACCTGATCGGCTGCGAGCTGCCCCAGCGGGAA										
Mus musculus	RefSeq	ILMN_190058	ILMN_190058	TUBB3	NM_023279.2	NM_023279.2		22152	31982671	NM_023279.2	Tubb3	NP_075768.1	ILMN_1252657	003130458	S	1	GAGGAGGGGGAGATGTATGAAGATGATGACGAGGAATCGGAAGCCCAGGG	8	+	125935464-125935505:125935506-125935513	8qE1	Mus musculus tubulin, beta 3 (Tubb3), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	M(beta)3; M(beta)6; 3200002H15Rik	M(beta)3; M(beta)6; 3200002H15Rik
Mus musculus	RefSeq	ILMN_210573	ILMN_210573	PCDHB14	NM_053139.3	NM_053139.3		93885	148613870	NM_053139.3	Pcdhb14	NP_444369.3	ILMN_2607000	000050739	S	2653	GAGGTCTGCACTAGCATGATACTGGTAGTCATATTTGTAGCTGATTCACA				18qB3	Mus musculus protocadherin beta 14 (Pcdhb14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcdhb17; 2210006M07Rik; PcdhbN	Pcdhb17; 2210006M07Rik; PcdhbN
Mus musculus	RefSeq	ILMN_201172	ILMN_201172	LOC384890	XM_357921.1	XM_357921.1			38089619	XM_357921.1	LOC384890		ILMN_1217245	003120164	S	373	GGAACCCACCTCCTCAGCATGCAGGGTGAGAGGACTGAGGAAACCGCCTA										
Mus musculus	RefSeq	ILMN_212672	ILMN_249031	LYZL6	NM_027083.1	NM_027083.1		69444	58037160	NM_027083.1	Lyzl6	NP_081359.1	ILMN_1236299	005700239	S	773	GGGAAATATCTTACCTCGGCTCCCTGCTTGTGTTCAGCCAGGCCCAGTTC	11	-	103492448-103492497	11qE1	Mus musculus lysozyme-like 6 (Lyzl6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]	Lyc1; 1700023H08Rik	Lyc1; 1700023H08Rik
Mus musculus	RefSeq	ILMN_211754	ILMN_211754	SRM	NM_009272.2	NM_009272.2		20810	31981989	NM_009272.2	Srm	NP_033298.1	ILMN_2809611	006760180	S	1027	GTGCCACTGTGACACCACCCGAGACCTCAATCGGATTGGACCAAGGATCT	4	+	147438118-147438167	4qE2	Mus musculus spermidine synthase (Srm), mRNA.		The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane [goid 8295] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosylmethioninamine + putrescine = 5'-methylthioadenosine + spermidine [goid 4766] [evidence IEA]	SpdSy; AA407669	SpdSy; AA407669
Mus musculus	MEEBO	ILMN_185077	ILMN_185077	SMARCD1	scl0002509.1_27				13937376	NM_031842	Smarcd1		ILMN_1241271	005420327	S	2	AGCTGAAGACCCAGCGAGAGTTCATGTTGAGCTTTGCCCGAGACCCTCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]			
Mus musculus	Riken	ILMN_204003	ILMN_204003	A630049I22RIK	ri|A630049I22|PX00145P22|AK080309|970					AK080309	A630049I22Rik		ILMN_1242746	003370161	S	368	CAGAGTGGAGATGGCTGAGGAGTGGGTGTTGACTTCGCTTTGCATCAGGG										
Mus musculus	RefSeq	ILMN_221387	ILMN_310775	LOC100040605	XM_001475096.1	XM_001475096.1		100040605	149254013	XM_001475096.1	LOC100040605	XP_001475146.1	ILMN_2734921	001980189	S	394	AAGGAGTACCGCTCCAAGCTCATCCTGTTCCCCAGGAAGCCTTCTGCTCC	5	-	92569554-92569603	5qE2	PREDICTED: Mus musculus similar to ribosomal protein L13 (LOC100040605), mRNA.					
Mus musculus	MEEBO	ILMN_210475	ILMN_210475	4930542C12RIK	scl35572.1.60_68	NM_026292.1			13385787	NM_026292.1	4930542C12Rik		ILMN_2605982	001660048	S	874	GAGGACACGCAGAATCTTAGCATTGAATGTCTTGTAGGAGACACTGAGGA										
Mus musculus	Riken	ILMN_205019	ILMN_205019	A230068P09RIK	ri|A230068P09|PX00129D03|AK038854|2964					AK038854	A230068P09Rik		ILMN_2569373	002450091	S	2479	GATGTCTGAGCCTAGCTGAGCTTGCACTGTACCCCATTGTGACGGAGCAC										
Mus musculus	RefSeq	ILMN_223215	ILMN_313413	LOC100042159	XM_001474533.1	XM_001474533.1		100042159	149270905	XM_001474533.1	LOC100042159	XP_001474583.1	ILMN_1242639	004610437	S	1787	TCAAATCAAATAAACCTAATCTTCTGATTTAAATTTACCATCGAGATCCA	X	-	3665601-3665650	XqA1.1	PREDICTED: Mus musculus similar to mgclh (LOC100042159), mRNA.					
Mus musculus	RefSeq	ILMN_210255	ILMN_236832	CALR3	NM_028500.2	NM_028500.2		73316	142387566	NM_028500.2	Calr3	NP_082776.1	ILMN_1248535	002000722	S	417	GGTTACATCAAGGTGTTTCCGTCTGACCTGGACCAGAAGAAGATGAACGG	8	-	74962356-74962405	8qB3.3	Mus musculus calreticulin 3 (Calr3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	6330586I20Rik; Crt2; 1700031L01Rik	6330586I20Rik; Crt2; 1700031L01Rik
Mus musculus	RefSeq	ILMN_210255	ILMN_236832	CALR3	NM_028500.2	NM_028500.2		73316	142387566	NM_028500.2	Calr3	NP_082776.1	ILMN_2603760	006840619	S	209	GCAGTCCACCAATGACTCCCAGTTTGGGCACTTCAGAGTCTCATCGGGGA	8	-	74967323-74967372	8qB3.3	Mus musculus calreticulin 3 (Calr3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	6330586I20Rik; Crt2; 1700031L01Rik	6330586I20Rik; Crt2; 1700031L01Rik
Mus musculus	RefSeq	ILMN_260975	ILMN_260975	H2-OA	NM_008206.1	NM_008206.1		15001	6680150	NM_008206.1	H2-Oa	NP_032232.1	ILMN_2867076	000730075	S	481	AAGGGAGTGGCCCAGACCAGCTTCTACTCTCAGCCTAACCACAGGTTCCG	17	+	34230996-34231045	17qB1	Mus musculus histocompatibility 2, O region alpha locus (H2-Oa), mRNA.		The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]		H-2Oa	H-2Oa
Mus musculus	RefSeq	ILMN_251089	ILMN_251089	NR2C2AP	NM_001025587.1	NM_001025587.1		75692	70980528	NM_001025587.1	Nr2c2ap	NP_001020758.1	ILMN_3084818	005490689	A	975	GTAAACAGGAGGCCGTGAGCAGGAAACTGTCCAGCCAAGTGCTTTTCTGC	8	+	72657440-72657489	8qB3.3	Mus musculus nuclear receptor 2C2-associated protein (Nr2c2ap), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC103332	MGC103332
Mus musculus	RefSeq	ILMN_194628	ILMN_251089	NR2C2AP	NM_001025587.1	NM_001025587.1		75692	70980528	NM_001025587.1	Nr2c2ap	NP_001020758.1	ILMN_1233032	003180110	S	294	GCCGGCAATTTGGAAAGAAACATCTTTTTGACCAGGATGAAGAGACGTGC	8	+	72655843-72655892	8qB3.3	Mus musculus nuclear receptor 2C2-associated protein (Nr2c2ap), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC103332	MGC103332
Mus musculus	MEEBO	ILMN_214952	ILMN_214952	4930590A17RIK	scl48906.7.1_24	XM_148730.1			20896014	XM_148730.1	4930590A17Rik		ILMN_1243463	000290215	S	618	CCAAAGGTTAAAACAACTTCTCCCTCCTCCACAACAAAAGCAAAAATCTC										
Mus musculus	RefSeq	ILMN_201391	ILMN_201391	LOC385081	XM_358041.1	XM_358041.1			38093453	XM_358041.1	LOC385081		ILMN_2542133	003890369	S	201	GTACTATTCGGGAAACCCAGTGGTTCAAGGAGTGAACGGCTTCAAGGCTG										
Mus musculus	RefSeq	ILMN_187478	ILMN_228019	BCL11A	NM_016707.2	NM_016707.2		14025	118131099	NM_016707.2	Bcl11a	NP_057916.1	ILMN_2712044	000460692	S	2856	GCGACGTCCAACCCTTTTGAAACCAGCCAACCTAATTACCCGTACTGTGG	11	+	24073050-24073099	11qA3.2	Mus musculus B-cell CLL/lymphoma 11A (zinc finger protein) (Bcl11a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	2810047E18Rik; Evi9; mKIAA1809; Ctip1; D930021L15Rik	2810047E18Rik; Evi9; mKIAA1809; Ctip1; D930021L15Rik
Mus musculus	MEEBO	ILMN_185106	ILMN_185106	SCL000209.1_5	scl000209.1_5	D83484.1			1199932	D83484.1	scl000209.1_5		ILMN_2424203	003360576	S	18	GAGCTGCCACACAGCTCAGCCATGAGCAGCAGAAAGAACTTTTCCCGGCT										
Mus musculus	RefSeq	ILMN_190813	ILMN_190813	UGT2B5	NM_009467.1	NM_009467.1		22238	6678500	NM_009467.1	Ugt2b5	NP_033493.1	ILMN_2473505	006380437	S	1731	TAAGAAGACATATACATCTGTGAATACTGATACATTCTCAAAAATCTCCA	5	-	87554062-87554111	5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide B5 (Ugt2b5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	Udpgt-3; AI118071; m-1	Udpgt-3; AI118071; m-1
Mus musculus	RefSeq	ILMN_193260	ILMN_237293	AZIN1	NM_018745.4	NM_018745.4		54375	146134433	NM_018745.4	Azin1	NP_061215.1	ILMN_1238799	004250653	S	4503	GTCTGCTTCTAACCTTGCTTCTGGCACTGAACTATTCTAGCAGAGGCCAG				15qB3.1	Mus musculus antizyme inhibitor 1 (Azin1), mRNA.		The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups [goid 6596] [evidence IEA]; The chemical reactions and pathways involving polyamines, any organic compound containing two or more amino groups [goid 6595] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Upregulation of the activity of the enzyme ornithine decarboxylase [goid 42978] [evidence IGI]	1700085L02Rik; Oazi; Oazin; AI414949	1700085L02Rik; Oazi; Oazin; AI414949
Mus musculus	RefSeq	ILMN_211539	ILMN_211539	PPT2	NM_019441.2	NM_019441.2		54397	31560426	NM_019441.2	Ppt2	NP_062314.1	ILMN_2796869	003180731	S	1462	CTAGCCTCCCCACCAAGAGGGGCACCCATAAGAGGGGGTGTTCTGAGGCT	17	-	34224915-34224964	17qB1	Mus musculus palmitoyl-protein thioesterase 2 (Ppt2), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-protein + H2O = palmitate + protein [goid 8474] [evidence IMP]	AA672937; 0610007M19Rik	AA672937; 0610007M19Rik
Mus musculus	MEEBO	ILMN_184299	ILMN_184299	ENTPD1	scl53142.15_13				31542610	NM_009848	Entpd1		ILMN_1222379	003850750	S	1	CCACCTGGGTTCAAAGATAATTCTTCATGTTTGCATTTTCCAAAATGTAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside diphosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with diphosphate on its glycose moiety [goid 9181] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6200] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IDA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IDA]		
Mus musculus	RefSeq	ILMN_242380	ILMN_242380	ZFP787	NM_001013012.1	NM_001013012.1		67109	67846114	NM_001013012.1	Zfp787	NP_001013030.1	ILMN_2984999	002140768	S	1527	CTGGGAGCCAGAGACTGAGAGAACTGCAAGGATCAATTGGCACTAGACCC	7	-	6083413-6083462	7qA1	Mus musculus zinc finger protein 787 (Zfp787), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2210018M03Rik	2210018M03Rik
Mus musculus	RefSeq	ILMN_192754	ILMN_242380	ZFP787	NM_001013012.1	NM_001013012.1		67109	67846114	NM_001013012.1	Zfp787	NP_001013030.1	ILMN_1216854	004260593	S	1782	GGATTTGCAGTAGCAGAGGCGTGAAGTAGCCTCCTGTTCCCAGCACGGTC	7	-	6083158-6083207	7qA1	Mus musculus zinc finger protein 787 (Zfp787), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2210018M03Rik	2210018M03Rik
Mus musculus	MEEBO	ILMN_187707	ILMN_187707	SRCS2	scl0020782.1_0						Srcs2		ILMN_2446432	003390113	S	19	GATGATCAGAAGTACATAACACATTGGAGAGGTGTCGGACAGTGTGCAGC										
Mus musculus	RefSeq	ILMN_220766	ILMN_220766	CEP57	NM_026665.2	NM_026665.2		74360	31980864	NM_026665.2	Cep57	NP_080941.2	ILMN_2727967	002070040	S	987	GCACAGCCACATTACAGATTGTGCTTAGGTGATATGCCTTTTGTTGCTGG	9	-	13617080-13617129	9qA1	Mus musculus centrosomal protein 57 (Cep57), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence ISS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISS]	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence ISS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [pmid 12954732] [evidence IEP]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with fibroblast growth factor [goid 17134] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4931428M20Rik; 4921510P06Rik; 3110002L15Rik; AI467480; Tsp57; mKIAA0092	4931428M20Rik; 4921510P06Rik; 3110002L15Rik; AI467480; Tsp57; mKIAA0092
Mus musculus	RefSeq	ILMN_220766	ILMN_220766	CEP57	NM_026665.2	NM_026665.2		74360	31980864	NM_026665.2	Cep57	NP_080941.2	ILMN_1223812	000110059	S	1746	GCCATTACTGGCAGGTGTTAGGGGCCAAGCTTCATTACAGTCTATTGTGC	9	-	13612910-13612959	9qA1	Mus musculus centrosomal protein 57 (Cep57), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence ISS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISS]	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence ISS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [pmid 12954732] [evidence IEP]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with fibroblast growth factor [goid 17134] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4931428M20Rik; 4921510P06Rik; 3110002L15Rik; AI467480; Tsp57; mKIAA0092	4931428M20Rik; 4921510P06Rik; 3110002L15Rik; AI467480; Tsp57; mKIAA0092
Mus musculus	RefSeq	ILMN_216619	ILMN_228297	PRL2C5	NM_181852.1	NM_181852.1		107849	49258207	NM_181852.1	Prl2c5	NP_862900.1	ILMN_2673286	004490719	S	482	CCCTCATGAGCACCATGAATGGAGATGAAGAAAATAAGAACCCTGCCTGG	13	+	13283019-13283035:13283912-13283944	13qA1	Mus musculus prolactin family 2, subfamily c, member 5 (Prl2c5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Mrpplf4; MRP-4; PLF-4	Mrpplf4; MRP-4; PLF-4
Mus musculus	RefSeq	ILMN_215782	ILMN_215782	5730494N06RIK	NM_027478.2	NM_027478.2		70612	142357407	NM_027478.2	5730494N06Rik	NP_081754.1	ILMN_2663516	003290753	S	1319	CTCTGGTTTCTCCATAGTTTGCCTACTACAAAACTCAGGTGAATCTGTCC	2	-	132065446-132065495	2qF2	Mus musculus RIKEN cDNA 5730494N06 gene (5730494N06Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA407821	AA407821
Mus musculus	RefSeq	ILMN_196043	ILMN_229301	DHCR24	NM_053272.2	NM_053272.2		74754	114155128	NM_053272.2	Dhcr24	NP_444502.2	ILMN_1253224	006560382	S	1696	AGCCAGCTGCATGGACCTGCTCTCCCTCGCTCGCTCCGGCTTCTCTGCTT	4	+	106259386-106259435	4qC7	Mus musculus 24-dehydrocholesterol reductase (Dhcr24), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence ISO]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16125] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; The process whereby plasminogen is processed to plasmin. This process includes both the cleavage of plasminogen between Arg560-Val561 to form plasmin and cleavage at Arg310 by plasmin or trypsin to result in the final two-chain form of plasmin held together by disulfide bonds [goid 31639] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces NAD or NADP [goid 16628] [evidence ISO]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	mKIAA0018; 2310076D10Rik; 5830417J06Rik	mKIAA0018; 2310076D10Rik; 5830417J06Rik
Mus musculus	RefSeq	ILMN_196043	ILMN_229301	DHCR24	NM_053272.2	NM_053272.2		74754	114155128	NM_053272.2	Dhcr24	NP_444502.2	ILMN_2752940	004250228	S	1636	TTCCCTGAGGTGTACGACAAGATCTGCAAGGCGGCAAGGCACTGAGCAGG	4	+	106259326-106259370:106259371-106259375	4qC7	Mus musculus 24-dehydrocholesterol reductase (Dhcr24), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence ISO]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16125] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; The process whereby plasminogen is processed to plasmin. This process includes both the cleavage of plasminogen between Arg560-Val561 to form plasmin and cleavage at Arg310 by plasmin or trypsin to result in the final two-chain form of plasmin held together by disulfide bonds [goid 31639] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces NAD or NADP [goid 16628] [evidence ISO]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	mKIAA0018; 2310076D10Rik; 5830417J06Rik	mKIAA0018; 2310076D10Rik; 5830417J06Rik
Mus musculus	Riken	ILMN_202263	ILMN_202263	1810010K12RIK	ri|1810010K12|R000022C22|AK007425|1208					AK007425	1810010K12Rik		ILMN_1259404	001820382	S	1064	TACCCCAGTGGGAAGGTACAAATGTGCTCTTCTAAAGCAGGAAGGCACAG										
Mus musculus	RefSeq	ILMN_246582	ILMN_246582	OLFR965	NM_001011859.1	NM_001011859.1		258165	58801475	NM_001011859.1	Olfr965	NP_001011859.1	ILMN_3161298	000160674	S	426	ATGGATGATAGGTGGGGTGTATTGCATAGGTCTCATTGAAGCCACACTTC	9	+	39527239-39527288	9qA5.1	Mus musculus olfactory receptor 965 (Olfr965), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-28	MOR171-28
Mus musculus	MEEBO	ILMN_189554	ILMN_189554	ENPP2	scl018606.1_11				7657450	NM_015744	Enpp2		ILMN_2772998	000010446	S	2643	GGGCAGTGTAGTCTTAGCAACTGGTGTATATTTTTATATGGTGTTTGTAT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the reaction: H2O + 1-alkyl-sn-glycero-3-phosphoethanolamine = ethanol-amine + 1-alkyl-sn-glycerol 3-phosphate [goid 47391] [evidence IEA]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [evidence ISS]		
Mus musculus	RefSeq	ILMN_208610	ILMN_239942	DGKH	XM_988404.1	XM_988404.1		380921	94397688	XM_988404.1	Dgkh	XP_993498.1	ILMN_1221246	001170441	S	3471	GGGAGAGTACAAAGAAATCTTCATCCGTCATGACGTCAGAGGGGCTGAAC				14qD3	PREDICTED: Mus musculus diacylglycerol kinase, eta (Dgkh), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]	The chemical reactions and pathways involving diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues. DAG is a normal intermediate in the biosynthesis of phosphatidyl phospholipids and is released from them by phospholipase C activity. DAG from phosphatidyl inositol polyphosphates is important in signal transduction [goid 46339] [evidence ISO]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence ISO]		
Mus musculus	RefSeq	ILMN_216878	ILMN_216878	FASTKD2	NM_172422.1	NM_172422.1		75619	27369556	NM_172422.1	Fastkd2	NP_766010.1	ILMN_2817960	001500224	S	2947	TGCACACAGCAGATGAGGATGCCGTGCACATATGTAGCAAGCACTGCAAG	1	+	63687429-63687478	1qC2	Mus musculus FAST kinase domains 2 (Fastkd2), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2810421I24Rik	2810421I24Rik
Mus musculus	MEEBO	ILMN_218723	ILMN_218723	AAMP	scl0227290.1_240	NM_146110.1			22122618	NM_146110.1	Aamp		ILMN_1234981	004050470	S	1345	GACTTTGATTCGCTGGTGTGAGCCATGGGGTGCGTCTTTGTATGTTGGGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218059	ILMN_224523	ZFP14	NM_011748.2	NM_011748.2		243906	83641899	NM_011748.2	Zfp14	NP_035878.1	ILMN_1253157	003870500	S	2870	GGGAGATTTTTGTCACTTGAGCAAAAACTTCATGTTGAAAGGAGACTGAG	7	-	30821949-30821998	7qB1	Mus musculus zinc finger protein 14 (Zfp14), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4732429I09Rik; KIAA1559; Krox-9; Zfp-14; mKIAA1559	4732429I09Rik; KIAA1559; Krox-9; Zfp-14; mKIAA1559
Mus musculus	RefSeq	ILMN_248876	ILMN_248876	AI451557	NM_001033207.2	NM_001033207.2		102084	142384162	NM_001033207.2	AI451557	NP_001028379.1	ILMN_3161790	000520040	S	1426	ATCGTGTTCTTCCAAGGACTTCCAGCCCAGGCTTAGGAGTTAACCTGACC	8	+	97050867-97050916	8qC5	Mus musculus expressed sequence AI451557 (AI451557), mRNA.					
Mus musculus	RefSeq	ILMN_195975	ILMN_227569	PPM1B	XM_984927.1	XM_984927.1		19043	94403182	XM_984927.1	Ppm1b	XP_990021.1	ILMN_2520446	002940356	S	2188	GACTGGAACGATGCGTGTAGTAAATAAAGCCTGTGCTGTGGCCTCGCCTG				17qE4	PREDICTED: Mus musculus protein phosphatase 1B, magnesium dependent, beta isoform, transcript variant 2 (Ppm1b), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_260048	ILMN_260048	OLFR1148	NM_001011519.1	NM_001011519.1		258220	58372117	NM_001011519.1	Olfr1148	NP_001011519.1	ILMN_3160435	006250551	S	274	GGGACACAGAACCGAAGCATTTCACTGATGTCCTGTGCTACACAACTGTG	2	+	87673471-87673520	2qD	Mus musculus olfactory receptor 1148 (Olfr1148), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR264-7	MOR264-7
Mus musculus	RefSeq	ILMN_219061	ILMN_219061	PSMC3IP	NM_008949.2	NM_008949.2		19183	31982094	NM_008949.2	Psmc3ip	NP_032975.1	ILMN_2999654	002900368	S	578	CAGAGCTGTGTGATGCGATCCTTGAAGGCTACCCCAAGAGCAAGAAGCAG	11	-	100953767-100953770:100953846-100953891	11qD	Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein (Psmc3ip), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	HOP2; Tbpip; C79099	HOP2; Tbpip; C79099
Mus musculus	MEEBO	ILMN_190130	ILMN_190130	D6MIT97	scl0110963.1_108						D6Mit97		ILMN_2467429	001850452	S	19	CTTGCCTCAGGAGTCCCAGACAGGTTCAGTGGCAGTGGGTCAGGAACTGC										
Mus musculus	RefSeq	ILMN_194901	ILMN_194901	UBXD4	NM_145441.2	NM_145441.2		217379	31981776	NM_145441.2	Ubxd4	NP_663416.1	ILMN_1228185	000770647	S	20	CTCCAAAAATGTAATGTCTAACAATGAAGATAAAGATTCTCACCTGGCTG	12	-	4933290-4933339	12qA1.1	Mus musculus UBX domain containing 4 (Ubxd4), mRNA.				6330407P03Rik; MGC7992	6330407P03Rik; MGC7992
Mus musculus	RefSeq	ILMN_194901	ILMN_194901	UBXD4	NM_145441.2	NM_145441.2		217379	31981776	NM_145441.2	Ubxd4	NP_663416.1	ILMN_2865846	000430682	S	2421	ACGAGTGGAAAGATTTATAGAGAAAGGTGGTGTTGTATTTCCTTTTCTCC	12	-	4904938-4904987	12qA1.1	Mus musculus UBX domain containing 4 (Ubxd4), mRNA.				6330407P03Rik; MGC7992	6330407P03Rik; MGC7992
Mus musculus	Riken	ILMN_204228	ILMN_204228	A730068E08RIK	ri|A730068E08|PX00151J19|AK043194|1629					AK043194	A730068E08Rik		ILMN_1231253	005340020	S	1314	GATGCCTGTGCCTTGCGTGAAAAGGAGGGTTTTGTTGCTTGCAGTGGGGC										
Mus musculus	RefSeq	ILMN_210254	ILMN_210254	OLFR1165	NM_146648.1	NM_146648.1		258642	33239187	NM_146648.1	Olfr1165	NP_666859.1	ILMN_2603742	001090192	S	567	GTCCTGTTCTGACCCCACCTTCAGCCAAGTGGTATGTTTAACCATTTCTA	2	-	87941526-87941575	2qD	Mus musculus olfactory receptor 1165 (Olfr1165), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR174-7	MOR174-7
Mus musculus	RefSeq	ILMN_212962	ILMN_212962	PAOX	NM_153783.4	NM_153783.4		212503	146149215	NM_153783.4	Paox	NP_722478.2	ILMN_1220022	006960538	S	162	AGCGCCGGGGGCCGCATCCGCTCGGAACGCTGCTTCGGTGGTGTAGTGGA				7qF4	Mus musculus polyamine oxidase (exo-N4-amino) (Paox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups [goid 6598] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups [goid 6598] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IDA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence ISO]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AI118225; 2410012F02Rik; Pao	AI118225; 2410012F02Rik; Pao
Mus musculus	RefSeq	ILMN_212962	ILMN_212962	PAOX	NM_153783.4	NM_153783.4		212503	146149215	NM_153783.4	Paox	NP_722478.2	ILMN_2633942	004120470	S	1060	CGCCCTTACAGGACACAGCCCTCTCACTCCAAGACACCTGGTTCAAGAAG				7qF4	Mus musculus polyamine oxidase (exo-N4-amino) (Paox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups [goid 6598] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups [goid 6598] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IDA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence ISO]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AI118225; 2410012F02Rik; Pao	AI118225; 2410012F02Rik; Pao
Mus musculus	RefSeq	ILMN_212962	ILMN_212962	PAOX	NM_153783.4	NM_153783.4		212503	146149215	NM_153783.4	Paox	NP_722478.2	ILMN_1236459	005270022	S	1331	CAGCTATGTGGCTGTGGGCAGCACTGGCGATGACCTAGATCTGATGGCTC				7qF4	Mus musculus polyamine oxidase (exo-N4-amino) (Paox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups [goid 6598] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups [goid 6598] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IDA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence ISO]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AI118225; 2410012F02Rik; Pao	AI118225; 2410012F02Rik; Pao
Mus musculus	RefSeq	ILMN_196562	ILMN_196562	DEFCR4	NM_010039.1	NM_010039.1		13238	6753625	NM_010039.1	Defcr4	NP_034169.1	ILMN_2710914	001510470	S	224	AACGAGTTCGTGGGACTTGTGGAATACGATTTTTGTACTGCTGCCCCCGC	8	+	22975624-22975673		Mus musculus defensin related cryptdin 4 (Defcr4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]	Crp4	Crp4
Mus musculus	RefSeq	ILMN_196562	ILMN_196562	DEFCR4	NM_010039.1	NM_010039.1		13238	6753625	NM_010039.1	Defcr4	NP_034169.1	ILMN_2524846	007330326	S	227	GAGTTCGTGGGACTTGTGGAATACGATTTTTGTACTGCTGCCCCCGCCGC	8	+	22975627-22975676		Mus musculus defensin related cryptdin 4 (Defcr4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]	Crp4	Crp4
Mus musculus	RefSeq	ILMN_212084	ILMN_212084	NCAN	NM_007789.2	NM_007789.2		13004	40789267	NM_007789.2	Ncan	NP_031815.2	ILMN_2993652	006620026	S	6490	CTGAGCTCCAAGCACTCTGTCAACTGAGCTCCAAGCACTCTTATCTGTGC	8	-	72617576-72617625	8qB3.3	Mus musculus neurocan (Ncan), mRNA.		The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of synapse structural plasticity. Synapse structural plasticity is a type of cytoskeletal remodeling; this remodeling is induced by stimuli that can lead to long term potentiation and it can be activity-dependent or -independent. Examples of cytoskeletal changes include the formation of new spines and increase in spine size; this can be accompanied by the insertion of greater numbers of glutamate (or other neurotransmitter) receptors into the post-synaptic membrane [goid 51823] [evidence IMP]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Tgfbit; C230035B04; Cspg3	Tgfbit; C230035B04; Cspg3
Mus musculus	RefSeq	ILMN_201013	ILMN_314304	LOC100040384	XM_001473981.1	XM_001473981.1		100040384	149274098	XM_001473981.1	LOC100040384	XP_001474031.1	ILMN_1229648	004280709	S	725	GAGGAGAGATCAGGAGGTGACAGTGATATGTTGATAGGTAACTGGGTGCA	Y|NT_166424.1	+	235233-235282		PREDICTED: Mus musculus similar to spermiogenesis specific transcript on the Y 1 (LOC100040384), mRNA.					
Mus musculus	RefSeq	ILMN_254559	ILMN_254559	NANOGPD	NM_001080945.1	NM_001080945.1		634428	124301183	NM_001080945.1	Nanogpd	NP_001074414.1	ILMN_2923874	000940113	S	710	CGCTCCATAACTTAGGGGAGGACTTTCTGCAGCCTTATGTACAGTTGCAG					Mus musculus similar to Nanog homeobox (Nanogpd), mRNA.					
Mus musculus	RefSeq	ILMN_198540	ILMN_237135	LOC436196	XM_488332.1	XM_488332.1		436196	51830694	XM_488332.1	LOC436196	XP_488332.1	ILMN_1251439	004490717	S	3676	AAGAGACAGCTCTCTGCTGAGGAAGGTAGCATGGCAGAGCGTGGTTGCTC	X	-	17038412-17038461	XqA1.2	PREDICTED: Mus musculus similar to MORF-related gene X (LOC436196), mRNA.					
Mus musculus	RefSeq	ILMN_212793	ILMN_253509	SLC35B2	NM_028662.2	NM_028662.2		73836	141802496	NM_028662.2	Slc35b2	NP_082938.1	ILMN_1246740	002350594	S	2054	GGGGCCCCAGTGTTCCTACCCAAGTTTTGGTACTTGGAAATGTCACCTTT	17	+	45704534-45704583	17qB3	Mus musculus solute carrier family 35, member B2 (Slc35b2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AA407792; AI842275; Slc35b1; 1110003M08Rik	AA407792; AI842275; Slc35b1; 1110003M08Rik
Mus musculus	RefSeq	ILMN_234816	ILMN_234816	GNAS	NM_201617.1	NM_201617.1		14683	117959925	NM_201617.1	Gnas	NP_963911.1	ILMN_3056973	001850164	I	2560	GCACGGCTGCTTCGACTCAGACAGCTTGTTGTTGGTGTGTGTTGGTGTCC	2	+	174126132-174126181	2qH4	Mus musculus GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus (Gnas), transcript variant 6, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS];  [goid 6112] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1
Mus musculus	Riken	ILMN_202976	ILMN_202976	OSMR	ri|A430045F18|PX00136K11|AK040020|1015					AK040020	Osmr		ILMN_1247795	001400632	S	910	GACCCCCGTGGGTGTTATGACTCCCAGGCTGAGAACCACTGTATTAGAGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with oncostatin-M to initiate a change in cell activity [goid 4924] [evidence IDA];  [goid 4896] [evidence IEA]		
Mus musculus	RefSeq	ILMN_204637	ILMN_310422	LOC100039001	XM_001472068.1	XM_001472068.1		100039001	149258922	XM_001472068.1	LOC100039001	XP_001472118.1	ILMN_1258046	006370463	S	2150	CAGGCGGGCACCCAAAGTGCTTTCTTATGAGTGGAGGCAGGCATCTGAGG	8	-	75875237-75875286	8qB3.3	PREDICTED: Mus musculus hypothetical protein LOC100039001 (LOC100039001), mRNA.					
Mus musculus	RefSeq	ILMN_216701	ILMN_216701	ABPA	NM_009596.1	NM_009596.1		11354	39930318	NM_009596.1	Abpa	NP_033726.1	ILMN_1249191	005220504	S	113	GGGACCACTGAAGAGTATGTTGAGTACCTGAAACAATTCAATGAAAACAC	7	+	34806819-34806868	7qB1	Mus musculus androgen binding protein alpha (Abpa), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]			Abp; Tcp; Sal-1	Abp; Tcp; Sal-1
Mus musculus	RefSeq	ILMN_213783	ILMN_224956	MIER1	NM_001039081.1	NM_001039081.1		71148	84872224	NM_001039081.1	Mier1	NP_001034170.1	ILMN_2640733	003610497	S	2525	TTGGGATGTCTAAATTTCAGCATGATACTCAGATTACAAGCTTGTTTGCA	4	+	102836234-102836283	4qC6	Mus musculus mesoderm induction early response 1 homolog (Xenopus laevis (Mier1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4933425I22Rik; mKIAA1610; MGC107532; 5830411K19Rik	4933425I22Rik; mKIAA1610; MGC107532; 5830411K19Rik
Mus musculus	RefSeq	ILMN_213783	ILMN_224956	MIER1	NM_001039081.1	NM_001039081.1		71148	84872224	NM_001039081.1	Mier1	NP_001034170.1	ILMN_2751332	004810010	S	4437	TGATGTATTCTCAGTAAGGTTCAGAATCTGTAACTCAGCTCAACGCGGAT	4	+	102838146-102838195	4qC6	Mus musculus mesoderm induction early response 1 homolog (Xenopus laevis (Mier1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4933425I22Rik; mKIAA1610; MGC107532; 5830411K19Rik	4933425I22Rik; mKIAA1610; MGC107532; 5830411K19Rik
Mus musculus	Riken	ILMN_205921	ILMN_205921	B130006H11RIK	ri|B130006H11|PX00157M10|AK044828|4546					AK044828	B130006H11Rik		ILMN_1259742	002140133	S	4073	CCACTGCTTTTTGAATTCTGGGATTGCAGGCCTGTGGAGTGGTTTTTGGC										
Mus musculus	RefSeq	ILMN_213794	ILMN_213794	GLYCAM1	NM_008134.2	NM_008134.2		14663	142370881	NM_008134.2	Glycam1	NP_032160.1	ILMN_2640849	005050059	S	445	GATTTGTAACTGGTGCAGAAGACATAATCTCTGGTGCCAGTCGTATCACG	15	-	103393323-103393372	15qF3	Mus musculus glycosylation dependent cell adhesion molecule 1 (Glycam1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Sgp50	Sgp50
Mus musculus	RefSeq	ILMN_199320	ILMN_312864	LOC236010	XR_031370.1	XR_031370.1		236010	149258958	XR_031370.1	LOC236010		ILMN_1250998	005220079	S	8	CTGGCTTCACAAAGATGATCTTGGCAGCTGGTACCAGTCAGAGGGCCCTG	8	-	83722217-83722266	8qC2	PREDICTED: Mus musculus similar to Coenzyme Q10 homolog B (S. cerevisiae) (LOC236010), misc RNA.					
Mus musculus	RefSeq	ILMN_190751	ILMN_226877	STC2	NM_011491.3	NM_011491.3		20856	31982532	NM_011491.3	Stc2	NP_035621.1	ILMN_2739544	002900338	S	1577	GTGCATGGGATCTAGTGTTTCAGAGCTGCTGGAGGGGACATGGATGGTAC	11	-	31259607-31259656	11qA4	Mus musculus stanniocalcin 2 (Stc2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mustc2; Stc2l	mustc2; Stc2l
Mus musculus	RefSeq	ILMN_248255	ILMN_248255	SSTY2	NM_023546.2	NM_023546.2		70009	31980633	NM_023546.2	Ssty2	NP_076035.2	ILMN_2879232	006350379	S	647	AGATTTTCCTCAGGTGAGGGAGGTCCACCTCGCAGGCGCACTGGTTGGCA	Y|NT_165790.2	-	473767-473816		Mus musculus spermiogenesis specific transcript on the Y 2 (Ssty2), mRNA.				MGC107175; pc11; 1700029H17Rik	MGC107175; pc11; 1700029H17Rik
Mus musculus	RefSeq	ILMN_220327	ILMN_220327	KCTD11	NM_153143.3	NM_153143.3		216858	142353128	NM_153143.3	Kctd11	NP_694783.1	ILMN_2720611	005720553	S	3523	GGAATGGGCTTCCCCAGATTTCTCGGCCTTTGCCTTAGGTAATATCAGAT	11	-	69691336-69691385	11qB3	Mus musculus potassium channel tetramerisation domain containing 11 (Kctd11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	AF465352; Ren	AF465352; Ren
Mus musculus	MEEBO	ILMN_215290	ILMN_215290	2010308M01RIK	scl072121.12_86	XM_131083.2			23621709	XM_131083.2	2010308M01Rik		ILMN_2657682	005090609	S	1965	AAATCCTCAATACAGAACACTGGCCCAATGACCCATGTACAAAATAGTGG										
Mus musculus	RefSeq	ILMN_217427	ILMN_217427	PLD2	NM_008876.2	NM_008876.2		18806	118130632	NM_008876.2	Pld2	NP_032902.1	ILMN_2683094	005560044	S	3116	CCCTTCTTTGGCTCAGTCTGAGCTTGCCCACATCCAGGGCCACCTAGTTC	11	+	70370927-70370976	11qB3	Mus musculus phospholipase D2 (Pld2), mRNA.	The portion of the plasma membrane surrounding the brush border [goid 31526] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IDA]; The process by which a G-protein coupled receptor is taken up into an endocytic vesicle [goid 2031] [evidence IDA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	Riken	ILMN_205050	ILMN_205050	A830018L16RIK	ri|A830018L16|PX00154J01|AK043673|3511					AK043673	A830018L16Rik		ILMN_1213044	004810133	S	3041	GTGTAGTCTCACATATCTTTGCCCAGGTGGCTGAAAGAGACGCTGCTCTC										
Mus musculus	RefSeq	ILMN_219790	ILMN_219790	RPN1	NM_133933.2	NM_133933.2		103963	31543604	NM_133933.2	Rpn1	NP_598694.2	ILMN_2963625	004570341	S	3327	CAAAGTTGGTTAGGGAAATGGGATGGAGATTGTGGTGGGTAGGTGTGCCC	6	+	88070673-88070722	6qD1	Mus musculus ribophorin I (Rpn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [evidence IEA]	AU018702; Rpn-1; D6Wsu137e	AU018702; Rpn-1; D6Wsu137e
Mus musculus	RefSeq	ILMN_222904	ILMN_222904	CYP4A12A	NM_177406.3	NM_177406.3		277753	86198311	NM_177406.3	Cyp4a12a	NP_803125.2	ILMN_1254109	006620707	S	1850	CCTTAATGATCTCCCTAACCTGCACCCTGCCTTTCTCTTCTGTGTATTTC	4	+	115004848-115004897	4qD1	Mus musculus cytochrome P450, family 4, subfamily a, polypeptide 12a (Cyp4a12a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	RP23-32K12.1; Cyp4a12; BC025936; MGC25972	RP23-32K12.1; Cyp4a12; BC025936; MGC25972
Mus musculus	MEEBO	ILMN_194663	ILMN_194663	SCL0001493.1_2	scl0001493.1_2	AK086669.1			26103677	AK086669.1	scl0001493.1_2		ILMN_2508458	006280142	S	19	TGAAACTAGCTCAGATGCTGACCGAGCCCGGGAGAAGCTGAATGGGACGA										
Mus musculus	RefSeq	ILMN_196329	ILMN_196329	PTRH2	NM_175004.2	NM_175004.2		217057	118129837	NM_175004.2	Ptrh2	NP_778169.1	ILMN_2633993	003180440	S	180	CTGTAGACCAGGCTGGCCTCGAACTCAGGAATCTGCTCAACTGCTGGGAT	11	+	86501576-86501625	11qC	Mus musculus peptidyl-tRNA hydrolase 2 (Ptrh2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA [goid 4045] [evidence IEA]	CGI-147; Bit1; A230072I16Rik	CGI-147; Bit1; A230072I16Rik
Mus musculus	RefSeq	ILMN_204641	ILMN_258697	4930526A20RIK	XR_001613.1	XR_001613.1		622485	94401833	XR_001613.1	4930526A20Rik		ILMN_1239084	001190747	S	457	GTCTGTGTGTGTGTAGCTCTCATTGATCTTCCTGTGTAGACCAGGCTGGC	17	-	28213545-28213594	17qA3.3	PREDICTED: Mus musculus RIKEN cDNA 4930526A20 gene (4930526A20Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_210870	ILMN_210870	FOXP1	NM_053202.1	NM_053202.1		108655	16716508	NM_053202.1	Foxp1	NP_444432.1	ILMN_1252078	006290152	S	1747	CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGC	6	-	98889722-98889771	6qD3	Mus musculus forkhead box P1 (Foxp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IGI]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IGI]; Any process that activates or increases the frequency, rate, or extent of immunoglobulin production [goid 2639] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments [goid 2329] [evidence IMP]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	AI461938; 3110052D19Rik; AW494214; 4932443N09Rik	AI461938; 3110052D19Rik; AW494214; 4932443N09Rik
Mus musculus	RefSeq	ILMN_188182	ILMN_251007	UBE2J2	NM_001039158.1	NM_001039158.1		140499	85662414	NM_001039158.1	Ube2j2	NP_001034247.1	ILMN_2494397	001050379	S	113	CCCCACTCTTCCGCACCCTGCTCTGGCCTCGACCACGGCGAACCTGAACG	4	+	155318052-155318101	4qE2	Mus musculus ubiquitin-conjugating enzyme E2, J2 homolog (yeast) (Ube2j2), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	Ubc6p; 5730472G04Rik; AL022923; Ubc6; 2400008G19Rik; 1200007B18Rik	Ubc6p; 5730472G04Rik; AL022923; Ubc6; 2400008G19Rik; 1200007B18Rik
Mus musculus	RefSeq	ILMN_188182	ILMN_251007	UBE2J2	NM_001039158.1	NM_001039158.1		140499	85662414	NM_001039158.1	Ube2j2	NP_001034247.1	ILMN_2450460	002690338	S	3157	CAGCCTGCTCTCTGGCCACAAGGTGTCGCACTTAGTGTACGACTGAAGAG	4	+	155333531-155333580	4qE2	Mus musculus ubiquitin-conjugating enzyme E2, J2 homolog (yeast) (Ube2j2), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	Ubc6p; 5730472G04Rik; AL022923; Ubc6; 2400008G19Rik; 1200007B18Rik	Ubc6p; 5730472G04Rik; AL022923; Ubc6; 2400008G19Rik; 1200007B18Rik
Mus musculus	RefSeq	ILMN_246881	ILMN_246881	THG1L	NM_001080969.1	NM_001080969.1		66628	124377987	NM_001080969.1	Thg1l	NP_001074438.1	ILMN_2979430	006280296	S	438	GCCTCCAGTTACGTATTTTACTGGCGGGATTACTTTGAGGACCAGCCCCT	11	-	45766325-45766374	11qB1.1	Mus musculus tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) (Thg1l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AA387658; 5730409G07Rik; RP23-298M7.6; 1700121M19Rik; MGC107321	AA387658; 5730409G07Rik; RP23-298M7.6; 1700121M19Rik; MGC107321
Mus musculus	RefSeq	ILMN_211292	ILMN_211292	ECH1	NM_016772.1	NM_016772.1		51798	7949036	NM_016772.1	Ech1	NP_058052.1	ILMN_1254786	000540546	S	973	GGGACACAAAAAGCATCACCTTCTCCAAGCTCTGAATGTCTTCCGGACCC	7	+	29617093-29617127:29617128-29617142	7qA3	Mus musculus enoyl coenzyme A hydratase 1, peroxisomal (Ech1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC107274; AA617331	MGC107274; AA617331
Mus musculus	RefSeq	ILMN_186841	ILMN_245215	RFTN2	NM_028713.1	NM_028713.1		74013	110625980	NM_028713.1	Rftn2	NP_082989.1	ILMN_1212653	006590243	S	3495	CGTCTTGTACAGAACAGGGGCCTTCATTTAGGTATGAAAGACTGACCTCC	1	-	55227135-55227184	1qC1.2	Mus musculus raftlin family member 2 (Rftn2), mRNA. XM_920263 XM_986521 XM_986556 XM_986596 XM_986637 XM_986673	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			3222401M22Rik; KIAA0084; 2700010E02Rik	3222401M22Rik; KIAA0084; 2700010E02Rik
Mus musculus	RefSeq	ILMN_245215	ILMN_245215	RFTN2	NM_028713.1	NM_028713.1		74013	110625980	NM_028713.1	Rftn2	NP_082989.1	ILMN_2795178	004860441	S	3448	TGCTGCCAGGAGCCTTCCATCTTGCCAGCTTCTACCCGGGAAAGACTCGT	1	-	55227182-55227231	1qC1.2	Mus musculus raftlin family member 2 (Rftn2), mRNA. XM_920263 XM_986521 XM_986556 XM_986596 XM_986637 XM_986673	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			3222401M22Rik; KIAA0084; 2700010E02Rik	3222401M22Rik; KIAA0084; 2700010E02Rik
Mus musculus	RefSeq	ILMN_198736	ILMN_213796	MAP3K7IP3	NM_025729.3	NM_025729.3		66724	61556735	NM_025729.3	Map3k7ip3	NP_080005.2	ILMN_1212670	003450097	S	2321	CAGAGTGCTCGGACACAACCCCGAGATGAGGATTATGAAGGGGCTCCGTG	X	+	82875765-82875814	XqC1	Mus musculus mitogen-activated protein kinase kinase kinase 7 interacting protein 3 (Map3k7ip3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	KIAA4135; 4921526G09Rik; mKIAA4135; RP23-181A7.1	KIAA4135; 4921526G09Rik; mKIAA4135; RP23-181A7.1
Mus musculus	RefSeq	ILMN_213796	ILMN_213796	MAP3K7IP3	NM_025729.3	NM_025729.3		66724	61556735	NM_025729.3	Map3k7ip3	NP_080005.2	ILMN_2824022	004390255	S	5858	GGGCACTGCCTGTGTTGCAGCACTACTGTATCTTTGTTGAGCGACCTAAC	X	+	82879302-82879351	XqC1	Mus musculus mitogen-activated protein kinase kinase kinase 7 interacting protein 3 (Map3k7ip3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	KIAA4135; 4921526G09Rik; mKIAA4135; RP23-181A7.1	KIAA4135; 4921526G09Rik; mKIAA4135; RP23-181A7.1
Mus musculus	RefSeq	ILMN_199865	ILMN_199865	LOC384013	XM_357370.1	XM_357370.1			38078343	XM_357370.1	LOC384013		ILMN_1243655	003130470	S	269	TTGCCAACCAGATGCAAAGGATACCTGAGGTGGGCTCAGGCTCTGCCACA										
Mus musculus	RefSeq	ILMN_213617	ILMN_224427	IL1RAPL1	XM_982589.1	XM_982589.1		331461	94407887	XM_982589.1	Il1rapl1	XP_987683.1	ILMN_2639004	000870561	S	922	CTGGGGAACTATTCCTGTTATGTTGAAAATGGAAACGGACGTCGGCATGC				XqC1	PREDICTED: Mus musculus interleukin 1 receptor accessory protein-like 1 (Il1rapl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186740	ILMN_242007	R74862	NM_133790.1	NM_133790.1		97423	19526965	NM_133790.1	R74862	NP_598551.1	ILMN_2745522	007400333	S	329	CGATGTTTCCAGAGCGGTCTAACCTGGGCAGGAGTGAGCACTTTCCAGCA	7	-	150225429-150225464:150225465-150225478	7qF5	Mus musculus expressed sequence R74862 (R74862), mRNA.					
Mus musculus	RefSeq	ILMN_248681	ILMN_248681	OLFR1222	NM_001011860.1	NM_001011860.1		258177	58801477	NM_001011860.1	Olfr1222	NP_001011860.1	ILMN_3161191	000060372	S	677	GTCACAGCTCAGAAGGACGAAGGAAAGCTCTCTCAACCTGTGGATCCCAT	2	-	88965160-88965209	2qE1	Mus musculus olfactory receptor 1222 (Olfr1222), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR233-14	MOR233-14
Mus musculus	RefSeq	ILMN_238461	ILMN_238461	OLFR1425	NM_001011853.1	NM_001011853.1		258155	58801463	NM_001011853.1	Olfr1425	NP_001011853.1	ILMN_3160256	001030458	S	884	CCATGAGGAGACTCAGGAAAAGACTTGGACCTTCTTATTGGATAGAGAGG	19	-	12148187-12148236	19qA	Mus musculus olfactory receptor 1425 (Olfr1425), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR239-7	MOR239-7
Mus musculus	RefSeq	ILMN_219890	ILMN_219890	TMEM161B	NM_175187.4	NM_175187.4		72745	142373971	NM_175187.4	Tmem161b	NP_780396.2	ILMN_1249171	000010209	S	2342	CAAATTTGAGAATTACTTTGCAATCCTGCTGACTACGTGTATGTATTGTG	13	+	84435257-84435306	13qC3	Mus musculus transmembrane protein 161B (Tmem161b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2810446P07Rik; AI843389	2810446P07Rik; AI843389
Mus musculus	RefSeq	ILMN_221590	ILMN_221590	TCP11L1	NM_177190.4	NM_177190.4		320554	146198686	NM_177190.4	Tcp11l1	NP_796164.1	ILMN_1250177	003870646	S	2845	GAAACGCTGTTCTTTCTACAGCAGTATTCCTGAGCCTTGACTGTGGCAGT				2qE2	Mus musculus t-complex 11 like 1 (Tcp11l1), mRNA.				C130096D04Rik	C130096D04Rik
Mus musculus	RefSeq	ILMN_209689	ILMN_209689	GABPA	NM_008065.2	NM_008065.2		14390	34328118	NM_008065.2	Gabpa	NP_032091.2	ILMN_2758120	006180521	S	4075	GTTCCTGTTGCTAGAAAAGCGAGTTTTCCATGTGATGTTTACATTGACGT	16	+	84863112-84863161	16qC3.3	Mus musculus GA repeat binding protein, alpha (Gabpa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_191933	ILMN_209689	GABPA	NM_008065.2	NM_008065.2		14390	34328118	NM_008065.2	Gabpa	NP_032091.2	ILMN_2483521	003850717	S	304	TAGCAGGGTAAGGTCCCGGGGCCCTTCCCGTGGAATCGGCGCTAAGGAAC	16	+	84835672-84835721	16qC3.3	Mus musculus GA repeat binding protein, alpha (Gabpa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209689	ILMN_209689	GABPA	NM_008065.2	NM_008065.2		14390	34328118	NM_008065.2	Gabpa	NP_032091.2	ILMN_1252392	005690491	S	1812	GACCTAGGACCTCCTGGGGAGTCTTAAGGTTTTTCTTAAATATTTAGAGC	16	+	84860849-84860898	16qC3.3	Mus musculus GA repeat binding protein, alpha (Gabpa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209689	ILMN_209689	GABPA	NM_008065.2	NM_008065.2		14390	34328118	NM_008065.2	Gabpa	NP_032091.2	ILMN_1221800	000870326	S	251	TGGGGTTCCTTAGCGCCGATTCCACGGGAAGGGCCCCGGGACCTTACCCT	16	+	84835619-84835668	16qC3.3	Mus musculus GA repeat binding protein, alpha (Gabpa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215592	ILMN_215592	HYOU1	NM_021395.2	NM_021395.2		12282	31542332	NM_021395.2	Hyou1	NP_067370.2	ILMN_2661367	007100021	S	3864	GGAGAGACCATGGAGTGAATGTAAAAATGCCACCTCACTCTCAGGCAAGC	9	+	44199979-44200028	9qA5.2	Mus musculus hypoxia up-regulated 1 (Hyou1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Grp170; AI415631; CBP-140; Cab140; Orp150	Grp170; AI415631; CBP-140; Cab140; Orp150
Mus musculus	Riken	ILMN_203877	ILMN_203877	A630064P09RIK	ri|A630064P09|PX00146D15|AK042161|2051					AK042161	A630064P09Rik		ILMN_1230397	004390747	S	1649	GACCATTCCTCGGAGAACCAGAGACGTCTTCATGGCTGTAGATTACTATC										
Mus musculus	RefSeq	ILMN_247188	ILMN_247188	EG245376	NM_001081666.1	NM_001081666.1		245376	126157496	NM_001081666.1	EG245376	NP_001075135.1	ILMN_2993130	007570358	S	930	GCATCTGAATCACTTCTGCTGCTTTGAGTGCAACAACATCTTGGCAGGAG	X	-	23535081-23535130	XqA2	Mus musculus predicted gene, EG245376 (EG245376), mRNA.					
Mus musculus	RefSeq	ILMN_198546	ILMN_247188	EG245376	NM_001081666.1	NM_001081666.1		245376	126157496	NM_001081666.1	EG245376	NP_001075135.1	ILMN_1253226	005570546	S	1103	ACTTCACCTGGCATGAGTCTACAGAGTGCTTTTTATGCTCCTGTTGCAGC	X	-	23534908-23534957	XqA2	Mus musculus predicted gene, EG245376 (EG245376), mRNA.					
Mus musculus	RefSeq	ILMN_205083	ILMN_244083	RTKN2	NM_001081346.1	NM_001081346.1		170799	124486792	NM_001081346.1	Rtkn2	NP_001074815.1	ILMN_1224207	001300438	S	1278	GACAGCCTAGCAGACTTTCAGGAGTGGATGGGCGCCTTCCGGCAACATTT	10	+	67498639-67498688	10qB5.1	Mus musculus rhotekin 2 (Rtkn2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B130039D23Rik; RTKN2; Mbf	B130039D23Rik; RTKN2; Mbf
Mus musculus	RefSeq	ILMN_244083	ILMN_244083	RTKN2	NM_001081346.1	NM_001081346.1		170799	124486792	NM_001081346.1	Rtkn2	NP_001074815.1	ILMN_3087828	002680221	A	3701	GGGCATCAGATCCCATTACAGATGGTCATGAGCCACCATGTGGTTGTTGG	10	+	67506381-67506430	10qB5.1	Mus musculus rhotekin 2 (Rtkn2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B130039D23Rik; RTKN2; Mbf	B130039D23Rik; RTKN2; Mbf
Mus musculus	RefSeq	ILMN_204603	ILMN_244083	RTKN2	NM_001081346.1	NM_001081346.1		170799	124486792	NM_001081346.1	Rtkn2	NP_001074815.1	ILMN_1246493	002680286	S	1412	GGCAAAGGAGGCGACCTCAGTGTATTATGATATGAGCATCGATTCACCCG	10	+	67502852-67502886:67504127-67504141	10qB5.1	Mus musculus rhotekin 2 (Rtkn2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B130039D23Rik; RTKN2; Mbf	B130039D23Rik; RTKN2; Mbf
Mus musculus	RefSeq	ILMN_239631	ILMN_239631	5730589K01RIK	NM_023434.1	NM_023434.1		268741	12963678	NM_023434.1	5730589K01Rik	NP_075923.1	ILMN_2779636	004120152	S	2858	GAGGCAGGTTGGATCTCTGGGCTTGAAGTTAGCCAGGATTACCTAGTGAG	14	+	51216203-51216252	14qC2	Mus musculus RIKEN cDNA 5730589K01 gene (5730589K01Rik), mRNA.				AA410149; LCP1; A630040M18	AA410149; LCP1; A630040M18
Mus musculus	RefSeq	ILMN_217208	ILMN_217208	ISCA1	NM_026921.2	NM_026921.2		69046	31541845	NM_026921.2	Isca1	NP_081197.1	ILMN_2888842	005080156	S	1341	TTGACTAGACTCTTGTGTAAACCCTTTCGTGTGAGTTGCCATCTTGTTCG	13	-	59765562-59765611	13qB2	Mus musculus iron-sulfur cluster assembly 1 homolog (S. cerevisiae) (Isca1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	1810010A06Rik; Hbld2	1810010A06Rik; Hbld2
Mus musculus	RefSeq	ILMN_228344	ILMN_228344	TAS2R137	NM_001025385.1	NM_001025385.1		574417	71480159	NM_001025385.1	Tas2r137	NP_001020556.1	ILMN_3160550	004010397	S	815	CCAGTCGTTTCCTACCAGAAACCAGGATCGCCAGGATAATTGGAGTAGTG	6	+	40442051-40442100	6qB1	Mus musculus taste receptor, type 2, member 137 (Tas2r137), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence NAS]	mt2r41; T2R37	mt2r41; T2R37
Mus musculus	MEEBO	ILMN_189347	ILMN_189347	5730507C01RIK	scl0070632.1_5						5730507C01Rik		ILMN_1220008	005810411	S	19	TTGCATGTCAGAGTTCTTTAGGCATACACAAGACAAACCACACTCCAGAG								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215026	ILMN_215026	HSPA1L	scl50800.2_484	NM_013558.1			7305162	NM_013558.1	Hspa1l		ILMN_2654682	006860739	S	2140	TTCTTGAACTGACTGGACTCAAGCCTACGTCACCATCCTTTGGGATCCCG							The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_227083	ILMN_227083	ACADM	NM_007382.1	NM_007382.1		11364	6680617	NM_007382.1	Acadm	NP_031408.1	ILMN_2810473	007150255	S	1404	CGGATTCCCATGGCGGAGGAACCTGTCTTCAGCTCTATGGTGACCCTTTC	3	-	153860136-153860185	3qH3	Mus musculus acyl-Coenzyme A dehydrogenase, medium chain (Acadm), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nourishment [goid 42594] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IMP]; The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage [goid 6082] [evidence IMP]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AU018656; MCAD	AU018656; MCAD
Mus musculus	RefSeq	ILMN_228153	ILMN_228153	PODXL2	NM_176973.3	NM_176973.3		319655	31542456	NM_176973.3	Podxl2	NP_795947.2	ILMN_2836312	000020243	S	1742	AACGCGACCCTGAGGACTCGGACGTGTTCGAGGAGGACACTCACCTGTGA	6	-	88792760-88792760:88792761-88792809	6qD1	Mus musculus podocalyxin-like 2 (Podxl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PODLX2; D130074J02Rik	PODLX2; D130074J02Rik
Mus musculus	RefSeq	ILMN_209849	ILMN_209849	PCBP2	NM_011042.1	NM_011042.1		18521	6997238	NM_011042.1	Pcbp2	NP_035172.1	ILMN_2599777	002680170	S	1265	AGCTAGAACAGAGCAGACCCATCCATAATCCTGCTGTTCACCACCCATGA	15	+	102329078-102329127	15qF3	Mus musculus poly(rC) binding protein 2 (Pcbp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Hnrpx; alphaCP-2; AW412548	Hnrpx; alphaCP-2; AW412548
Mus musculus	RefSeq	ILMN_209849	ILMN_209849	PCBP2	NM_011042.1	NM_011042.1		18521	6997238	NM_011042.1	Pcbp2	NP_035172.1	ILMN_2843355	004220670	S	1081	TCCGGCGTCAAGGCGCCAAAATCAATGAGATCCGTCAGATGTCTGGGGCG	15	+	102321209-102321234:102328920-102328943	15qF3	Mus musculus poly(rC) binding protein 2 (Pcbp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Hnrpx; alphaCP-2; AW412548	Hnrpx; alphaCP-2; AW412548
Mus musculus	Riken	ILMN_204478	ILMN_204478	FXH	ri|B130014A09|PX00157M12|AK044929|3074					AK044929	Fxh		ILMN_1224107	004280475	S	2848	CCCAGATATTAGGAGGAAAGGGACTTTGGGGGGTGGGGAAGGGGTCTTGG										
Mus musculus	RefSeq	ILMN_222407	ILMN_222407	LRRC4C	NM_178725.4	NM_178725.4		241568	142352715	NM_178725.4	Lrrc4c	NP_848840.2	ILMN_1247141	001030070	S	2712	CAGTTCAGTGCATGAACCGTTATTGATCCGAATGAACTCTAAAGACAATG	2	+	97471041-97471090	2qE1	Mus musculus leucine rich repeat containing 4C (Lrrc4c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]	Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA1580; 6430556C10Rik; NGL-1	mKIAA1580; 6430556C10Rik; NGL-1
Mus musculus	RefSeq	ILMN_210266	ILMN_210266	CCDC137	NM_152807.3	NM_152807.3		67291	146149245	NM_152807.3	Ccdc137	NP_690020.1	ILMN_1217150	002000132	S	31	GAACATAGCACTGGTTACTGCGCGGTCGGCCGGTCTTAGAGGCTCGGGAC				11qE2	Mus musculus coiled-coil domain containing 137 (Ccdc137), mRNA.				3110023B02Rik; RP23-82I5.10	3110023B02Rik; RP23-82I5.10
Mus musculus	RefSeq	ILMN_210266	ILMN_210266	CCDC137	NM_152807.3	NM_152807.3		67291	146149245	NM_152807.3	Ccdc137	NP_690020.1	ILMN_1220014	000940630	S	2557	CTTTGTCCTGGTTGAAAATCAGGCACCCTGATGTACTGCTCTGCTGCAGG				11qE2	Mus musculus coiled-coil domain containing 137 (Ccdc137), mRNA.				3110023B02Rik; RP23-82I5.10	3110023B02Rik; RP23-82I5.10
Mus musculus	RefSeq	ILMN_198522	ILMN_198522	LOC232890	XM_145374.2	XM_145374.2			38085966	XM_145374.2	LOC232890		ILMN_1212638	006370669	S	794	TCCATCGCCACTAGGGAGGCAACGTCCTGGGTCCTAAGTCTATAGTTCAC										
Mus musculus	RefSeq	ILMN_202567	ILMN_257631	D0KIST2	XM_919181.2	XM_919181.2		27493	94380500	XM_919181.2	D0Kist2	XP_924274.1	ILMN_2550585	007160128	S	612	GTCTCACTGTGCTGTCATCTGAGACTTGAAGGTCATTACTGAACCCATGC				7qC	PREDICTED: Mus musculus DNA segment, KIST 2, transcript variant 3 (D0Kist2), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]				
Mus musculus	RefSeq	ILMN_211858	ILMN_257631	D0KIST2	XM_919181.2	XM_919181.2		27493	94380500	XM_919181.2	D0Kist2	XP_924274.1	ILMN_1254326	005050142	S	2112	ATCTCGATATGTGTGGTGAATTATTGGCACACTTTGTATTTACTTGATTA				7qC	PREDICTED: Mus musculus DNA segment, KIST 2, transcript variant 3 (D0Kist2), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]				
Mus musculus	RefSeq	ILMN_228606	ILMN_228606	B3GNT6	NM_001081167.1	NM_001081167.1		272411	124487188	NM_001081167.1	B3gnt6	NP_001074636.1	ILMN_2848444	005270112	S	1216	GAGGACGGATCTGGAAACACATGTTCCTGACCTCAACTTCAGGGGTTCTG	7	-	105342026-105342075	7qE2	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase) (B3gnt6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]	BC039789	BC039789
Mus musculus	RefSeq	ILMN_198720	ILMN_228606	B3GNT6	NM_001081167.1	NM_001081167.1		272411	124487188	NM_001081167.1	B3gnt6	NP_001074636.1	ILMN_1223828	006940370	S	1081	CACCGCTTCGCGCCTTATGAGATGCTGCTCATGTGGAAGGCGCTGCACAA	7	-	105342161-105342210	7qE2	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase) (B3gnt6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]	BC039789	BC039789
Mus musculus	RefSeq	ILMN_256852	ILMN_256852	SPRYD3	NM_001033277.2	NM_001033277.2		223918	142380796	NM_001033277.2	Spryd3	NP_001028449.1	ILMN_3162508	005130474	S	1316	CCGTATTTATCAGGACAGACGGAAGGGGAATCCTTCCCAGGGCGAGTAGG	15	-	101946923-101946972	15qF3	Mus musculus SPRY domain containing 3 (Spryd3), mRNA. XM_924590			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	BC008150	BC008150
Mus musculus	RefSeq	ILMN_190452	ILMN_190452	USP9X	NM_009481.2	NM_009481.2		22284	115511017	NM_009481.2	Usp9x	NP_033507.2	ILMN_2503651	001740048	S	5335	TCAGGTTATCTTTGGCCATTTAGCTGCTTCTCGACTACAGTACTATGTGC	X	+	12725187-12725236	XqA1.1	Mus musculus ubiquitin specific peptidase 9, X chromosome (Usp9x), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA407302; 5730589N07Rik; FAF-X; AA407699; Dffrx; Fafl; AL022658; AL022749	AA407302; 5730589N07Rik; FAF-X; AA407699; Dffrx; Fafl; AL022658; AL022749
Mus musculus	RefSeq	ILMN_190452	ILMN_190452	USP9X	NM_009481.2	NM_009481.2		22284	115511017	NM_009481.2	Usp9x	NP_033507.2	ILMN_2470287	000160053	S	5159	GAAGGCACAGGTAGTGATGTAGATGATGATATGTCTGGGGATGAGAAGCA	X	+	12722414-12722463	XqA1.1	Mus musculus ubiquitin specific peptidase 9, X chromosome (Usp9x), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA407302; 5730589N07Rik; FAF-X; AA407699; Dffrx; Fafl; AL022658; AL022749	AA407302; 5730589N07Rik; FAF-X; AA407699; Dffrx; Fafl; AL022658; AL022749
Mus musculus	RefSeq	ILMN_190452	ILMN_190452	USP9X	NM_009481.2	NM_009481.2		22284	115511017	NM_009481.2	Usp9x	NP_033507.2	ILMN_2510446	001260520	S	10279	GAAATTATGAAATATGTAAAACTTAGTGACTTCCTAGGTAAGAAGAAAAC	X	+	12748830-12748879	XqA1.1	Mus musculus ubiquitin specific peptidase 9, X chromosome (Usp9x), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA407302; 5730589N07Rik; FAF-X; AA407699; Dffrx; Fafl; AL022658; AL022749	AA407302; 5730589N07Rik; FAF-X; AA407699; Dffrx; Fafl; AL022658; AL022749
Mus musculus	RefSeq	ILMN_215105	ILMN_215105	PPIL3	NM_027351.2	NM_027351.2		70225	142374499	NM_027351.2	Ppil3	NP_081627.1	ILMN_2697945	002370010	S	587	GGATGAGTTGGAGAAGTTACCAGTAAATGAGAAGACATACAGACCTCTTA	1	-	58488100-58488149	1qC1.3	Mus musculus peptidylprolyl isomerase (cyclophilin)-like 3 (Ppil3), transcript variant 1, mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	2310076N22Rik; 2510026K04Rik; Cyp10l	2310076N22Rik; 2510026K04Rik; Cyp10l
Mus musculus	RefSeq	ILMN_215105	ILMN_215105	PPIL3	NM_027351.2	NM_027351.2		70225	142374499	NM_027351.2	Ppil3	NP_081627.1	ILMN_1220440	006100064	S	749	TTAACCAGTTCTCCTTCTCCTGGTGTTTGCAGGAATGGGCTCCATGTAGG	1	-	58487938-58487987	1qC1.3	Mus musculus peptidylprolyl isomerase (cyclophilin)-like 3 (Ppil3), transcript variant 1, mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	2310076N22Rik; 2510026K04Rik; Cyp10l	2310076N22Rik; 2510026K04Rik; Cyp10l
Mus musculus	MEEBO	ILMN_192159	ILMN_192159	APPBP2	scl39796.13_278				31981176	NM_025825	Appbp2		ILMN_2724868	001240564	S	2177	AGTCCACCCAAGACCCTATTTCGGGTAGTCCTGTATTGCAGTTCCTGTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence ISO]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]		
Mus musculus	RefSeq	ILMN_205436	ILMN_327120	LOC100046372	XM_001476089.1	XM_001476089.1		100046372	149267784	XM_001476089.1	LOC100046372	XP_001476139.1	ILMN_1230428	000010471	S	1429	GGGTGTTTGACCAGCATGTACCCACCCACCTGTGTTCGGTGCCAACGAAG					PREDICTED: Mus musculus hypothetical protein LOC100046372 (LOC100046372), mRNA.					
Mus musculus	RefSeq	ILMN_221381	ILMN_252658	BRD2	NM_001025387.2	NM_001025387.2		14312	100913023	NM_001025387.2	Brd2	NP_001020558.1	ILMN_2751505	001980403	S	4190	TGGCATAAAGCCCCCTGAGCTGTAGCTGTCCTGTTCACTTCTAAGGGCCC	17	-	34252687-34252736	17qB1	Mus musculus bromodomain containing 2 (Brd2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			mKIAA4005; Rnf3; AW228947; KIAA4005; Fsrg1; NAT; Ring3; Frg-1; D17H6S113E	mKIAA4005; Rnf3; AW228947; KIAA4005; Fsrg1; NAT; Ring3; Frg-1; D17H6S113E
Mus musculus	RefSeq	ILMN_193305	ILMN_252658	BRD2	NM_001025387.2	NM_001025387.2		14312	100913023	NM_001025387.2	Brd2	NP_001020558.1	ILMN_2495961	006280358	S	1810	AGGACCACGGTGGCCAAAATTCTTAGCTTCTTCCTTTCCCTCATGCAGCC	17	-	34256659-34256708	17qB1	Mus musculus bromodomain containing 2 (Brd2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			mKIAA4005; Rnf3; AW228947; KIAA4005; Fsrg1; NAT; Ring3; Frg-1; D17H6S113E	mKIAA4005; Rnf3; AW228947; KIAA4005; Fsrg1; NAT; Ring3; Frg-1; D17H6S113E
Mus musculus	RefSeq	ILMN_221381	ILMN_252658	BRD2	NM_001025387.2	NM_001025387.2		14312	100913023	NM_001025387.2	Brd2	NP_001020558.1	ILMN_2734848	007610722	S	3139	AACAACTGGCTGCCCTGTCCCAGGGCCCAATATCTAAGCCCAAGCGGAAG	17	-	34254117-34254166	17qB1	Mus musculus bromodomain containing 2 (Brd2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			mKIAA4005; Rnf3; AW228947; KIAA4005; Fsrg1; NAT; Ring3; Frg-1; D17H6S113E	mKIAA4005; Rnf3; AW228947; KIAA4005; Fsrg1; NAT; Ring3; Frg-1; D17H6S113E
Mus musculus	RefSeq	ILMN_184807	ILMN_251405	MAGI1	NM_010367.2	NM_010367.2		14924	134032039	NM_010367.2	Magi1	NP_034497.1	ILMN_2719587	005720301	S	3977	CATGTATGAGAAATGAAAAGCTCGGGGAGGCTTGCTTCTACCTTATGGGC	6	-	93630797-93630846	6qD1	Mus musculus membrane associated guanylate kinase, WW and PDZ domain containing 1 (Magi1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MAGI1c; TNRC19; KIAA4129; BAP1; Magi-1; WWP3; Gukmi1; Baiap1; mKIAA4129; AIP3	MAGI1c; TNRC19; KIAA4129; BAP1; Magi-1; WWP3; Gukmi1; Baiap1; mKIAA4129; AIP3
Mus musculus	RefSeq	ILMN_184807	ILMN_251405	MAGI1	NM_010367.2	NM_010367.2		14924	134032039	NM_010367.2	Magi1	NP_034497.1	ILMN_1258922	000360086	S	4852	CGAAATCATTTAGTTTCTTACCTGAGGAAGCATCTGACACCTGATAGTCC	6	-	93628136-93628185	6qD1	Mus musculus membrane associated guanylate kinase, WW and PDZ domain containing 1 (Magi1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MAGI1c; TNRC19; KIAA4129; BAP1; Magi-1; WWP3; Gukmi1; Baiap1; mKIAA4129; AIP3	MAGI1c; TNRC19; KIAA4129; BAP1; Magi-1; WWP3; Gukmi1; Baiap1; mKIAA4129; AIP3
Mus musculus	RefSeq	ILMN_212566	ILMN_312959	LOC627199	XR_034637.1	XR_034637.1		627199	149262864	XR_034637.1	LOC627199		ILMN_1217892	001260767	S	288	GCCCAGGGACTGGATTTCTGTATTTGGTCAATTTATATTTCTTATATCAG	12	-	13443658-13443707	12qA1.1	PREDICTED: Mus musculus similar to Der1-like domain family, member 1 (LOC627199), misc RNA.					
Mus musculus	RefSeq	ILMN_209773	ILMN_258169	SPAG9	NM_001025429.1	NM_001025429.1		70834	70887775	NM_001025429.1	Spag9	NP_001020600.1	ILMN_2775547	003460669	S	4103	CGCACTAATAACAGACGGATTATCACGATTTGTCTGAATGTCCCAAGAGC	11	+	93984587-93984636	11qD	Mus musculus sperm associated antigen 9 (Spag9), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IDA]; Interacting selectively with JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family [goid 8432] [evidence IDA]	Jip4; syd1; JSAP2; 3110018C07Rik; 4831406C20Rik; JLP; 4733401I23Rik; AW552012; Mapk8ip4; JSAP2a	Jip4; syd1; JSAP2; 3110018C07Rik; 4831406C20Rik; JLP; 4733401I23Rik; AW552012; Mapk8ip4; JSAP2a
Mus musculus	RefSeq	ILMN_209773	ILMN_258169	SPAG9	NM_001025429.1	NM_001025429.1		70834	70887775	NM_001025429.1	Spag9	NP_001020600.1	ILMN_1229777	001500382	S	1225	GGCCCGAGTTCTCATGGAGAGAAACCAGTACAAAGAGAGGCTGATGGAGC	11	+	93947608-93947657	11qD	Mus musculus sperm associated antigen 9 (Spag9), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IDA]; Interacting selectively with JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family [goid 8432] [evidence IDA]	Jip4; syd1; JSAP2; 3110018C07Rik; 4831406C20Rik; JLP; 4733401I23Rik; AW552012; Mapk8ip4; JSAP2a	Jip4; syd1; JSAP2; 3110018C07Rik; 4831406C20Rik; JLP; 4733401I23Rik; AW552012; Mapk8ip4; JSAP2a
Mus musculus	RefSeq	ILMN_209773	ILMN_258169	SPAG9	NM_001025429.1	NM_001025429.1		70834	70887775	NM_001025429.1	Spag9	NP_001020600.1	ILMN_2750850	001070632	S	4118	CGGATTATCACGATTTGTCTGAATGTCCCAAGAGCGCTAAGAGCTAACTG	11	+	93984602-93984651	11qD	Mus musculus sperm associated antigen 9 (Spag9), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IDA]; Interacting selectively with JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family [goid 8432] [evidence IDA]	Jip4; syd1; JSAP2; 3110018C07Rik; 4831406C20Rik; JLP; 4733401I23Rik; AW552012; Mapk8ip4; JSAP2a	Jip4; syd1; JSAP2; 3110018C07Rik; 4831406C20Rik; JLP; 4733401I23Rik; AW552012; Mapk8ip4; JSAP2a
Mus musculus	RefSeq	ILMN_222970	ILMN_323194	4930451G09RIK	XR_035207.1	XR_035207.1		74684	149267722	XR_035207.1	4930451G09Rik		ILMN_2757459	000110050	S	2450	ACACAAAGATCAGGTCCTATGGCAGGTCACTGGTAGGCAGCATTAAGCCC				16qA1	PREDICTED: Mus musculus RIKEN cDNA 4930451G09 gene (4930451G09Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_197236	ILMN_312072	LOC100047041	XM_001477473.1	XM_001477473.1		100047041	149264166	XM_001477473.1	LOC100047041	XP_001477523.1	ILMN_1249427	003990390	S	306	GAGGACCAGGAGATACGACAGCAGGAACTTGAAGCTGAGGGCTCGTGGCT					PREDICTED: Mus musculus hypothetical protein LOC100047041 (LOC100047041), mRNA.					
Mus musculus	RefSeq	ILMN_210800	ILMN_210800	OLFR1416	NM_147038.1	NM_147038.1		259040	22128868	NM_147038.1	Olfr1416	NP_667249.1	ILMN_1234983	006960014	S	884	CTGAATTTAAGGATGCTGTGAGAAGAACTTTGGGATTGGGAAATACTCCC	1	-	94376263-94376312	1qD	Mus musculus olfactory receptor 1416 (Olfr1416), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR103-3	MOR103-3
Mus musculus	RefSeq	ILMN_224034	ILMN_246327	INMT	NM_009349.3	NM_009349.3		21743	145966708	NM_009349.3	Inmt	NP_033375.1	ILMN_1231445	004640221	S	948	CAGCACCAACATCCATCCCCTTTGCTCTTATTGTACCCTGTTGAAAGTTC				6qB3	Mus musculus indolethylamine N-methyltransferase (Inmt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + an amine = S-adenosyl-L-homocysteine + a methylated amine [goid 30748] [evidence IEA]	Temt	Temt
Mus musculus	RefSeq	ILMN_220504	ILMN_220504	MVP	NM_080638.1	NM_080638.1		78388	18079350	NM_080638.1	Mvp	NP_542369.1	ILMN_2887065	006960035	S	2599	CACAGATGGCTCGTCCCCCATCAACCTCTTCAACACAGCCTTCGGCTTGC	7	-	126778169-126778218	7qF3	Mus musculus major vault protein (Mvp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]			LRP; VAULT1; 2310009M24Rik	LRP; VAULT1; 2310009M24Rik
Mus musculus	MEEBO	ILMN_224185	ILMN_224185	C130036J11	scl0244853.10_325				27370417	NM_172921	C130036J11		ILMN_2776170	001710139	S	4805	GATAAACAAAAACAAAATATGTCCAAAACACCATCTTGAAACCTGATATT										
Mus musculus	MEEBO	ILMN_217697	ILMN_217697	2610029I01RIK	scl24506.4_70	XM_131302.2			38078091	XM_131302.2	2610029I01Rik		ILMN_2686568	005270039	S	1272	CTACTCAGGAAAATATATTCACAGCATCTGAAGACTCATGGCAATGTGTG								Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	Riken	ILMN_201725	ILMN_201725	2010001P08RIK	ri|2010001P08|ZX00043D17|AK008023|639					AK008023	2010001P08Rik		ILMN_1244093	003840672	S	340	AGTACTGCTGGGTACCATCTCCTCCTACCCTGAGGACAATGAGCCGAAGT										
Mus musculus	RefSeq	ILMN_187922	ILMN_228886	NET1	NM_001047159.1	NM_001047159.1		56349	114145470	NM_001047159.1	Net1	NP_001040624.1	ILMN_2610771	002630189	S	2256	CCTCAGAGGGAGCATGGAATTGTAATAGTGACACCTACGATCCGCATGGA	13	-	3882829-3882878	13qA1	Mus musculus neuroepithelial cell transforming gene 1 (Net1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	AU015857; 0610025H04Rik; mNET1; 9530071N24Rik; AI604373; Net1a	AU015857; 0610025H04Rik; mNET1; 9530071N24Rik; AI604373; Net1a
Mus musculus	RefSeq	ILMN_200568	ILMN_200568	LOC383362	XM_357006.1	XM_357006.1			38083806	XM_357006.1	LOC383362		ILMN_1234359	006060068	S	463	CTGACCTTTACCTTTCCCACCATTCATTCTAAAGCCACAGCCAGACCCCC										
Mus musculus	RefSeq	ILMN_201044	ILMN_201044	LOC381963	XM_355995.1	XM_355995.1			38088127	XM_355995.1	LOC381963		ILMN_1227194	003840181	S	1462	CCGGGTAAGCACAGCCACTGACCAAGGGGAACCAGAAGGTTCTACCACCT										
Mus musculus	RefSeq	ILMN_211100	ILMN_211100	ZFP758	NM_145484.2	NM_145484.2		224598	114842386	NM_145484.2	Zfp758	NP_663459.2	ILMN_2786125	003930543	S	2720	GATGCTCTTTATCCTATAGATATGCCTACTGATAAGCAGTTTGCTCCAAG	17	+	22513994-22514043	17qA3.3	Mus musculus zinc finger protein 758 (Zfp758), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC021442; MGC67807; MGC29357	BC021442; MGC67807; MGC29357
Mus musculus	RefSeq	ILMN_209339	ILMN_209339	MDM1	NM_148922.2	NM_148922.2		17245	27229284	NM_148922.2	Mdm1	NP_683724.1	ILMN_1227023	003420088	S	1924	GATTTGCTGATACTCTTCCTGTTTCGAAAATTTTGGACCGTCAGCCCAGC	10	+	117601360-117601409	10qD2	Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mdm-1	Mdm-1
Mus musculus	RefSeq	ILMN_209339	ILMN_209339	MDM1	NM_148922.2	NM_148922.2		17245	27229284	NM_148922.2	Mdm1	NP_683724.1	ILMN_2655659	005720541	S	1658	AGAGAACTCGGTATCCAGCGGACGCACCATGATCTCACGACGCCAGCTGT	10	+	117596560-117596609	10qD2	Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mdm-1	Mdm-1
Mus musculus	RefSeq	ILMN_209339	ILMN_209339	MDM1	NM_148922.2	NM_148922.2		17245	27229284	NM_148922.2	Mdm1	NP_683724.1	ILMN_1236598	004280669	S	1331	CCCTCCTACCAAACTAGAAGAAAGAAAAGTTGCCTCGGGAGAGCAGCCCC	10	+	117595391-117595440	10qD2	Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mdm-1	Mdm-1
Mus musculus	RefSeq	ILMN_260530	ILMN_209339	MDM1	NM_148922.2	NM_148922.2		17245	27229284	NM_148922.2	Mdm1	NP_683724.1	ILMN_3163261	006840608	A	484	CTGCGGACTCGAGAGCTGAAGGGGTTTCAGACACTGTGGAAAAGCACCAG	10	+	117583888-117583937	10qD2	Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mdm-1	Mdm-1
Mus musculus	RefSeq	ILMN_209339	ILMN_209339	MDM1	NM_148922.2	NM_148922.2		17245	27229284	NM_148922.2	Mdm1	NP_683724.1	ILMN_2728300	000540470	S	2654	GCCTTCTGTATACACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGC	10	+	117605633-117605682	10qD2	Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mdm-1	Mdm-1
Mus musculus	RefSeq	ILMN_209339	ILMN_209339	MDM1	NM_148922.2	NM_148922.2		17245	27229284	NM_148922.2	Mdm1	NP_683724.1	ILMN_2594863	000730180	S	948	GAAGTAGACATGGCGTCGGAAGACTCAGACCAGTCTGTAAAGAAGCCTGC	10	+	117589079-117589128	10qD2	Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mdm-1	Mdm-1
Mus musculus	RefSeq	ILMN_209339	ILMN_209339	MDM1	NM_148922.2	NM_148922.2		17245	27229284	NM_148922.2	Mdm1	NP_683724.1	ILMN_2754667	000020300	S	1223	CTGTTGGGACGTCTCCTCAGTCACAAGCTCGGAAGGCACCGTCAGTAGCA	10	+	117594352-117594401	10qD2	Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mdm-1	Mdm-1
Mus musculus	RefSeq	ILMN_209339	ILMN_209339	MDM1	NM_148922.2	NM_148922.2		17245	27229284	NM_148922.2	Mdm1	NP_683724.1	ILMN_2661100	000150048	S	809	CACCCACGAGACTGAATACAAGCGAAATTTCAAGGGTTTAACTCCAGTGA	10	+	117587895-117587944	10qD2	Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mdm-1	Mdm-1
Mus musculus	RefSeq	ILMN_209339	ILMN_209339	MDM1	NM_148922.2	NM_148922.2		17245	27229284	NM_148922.2	Mdm1	NP_683724.1	ILMN_2727628	003990747	S	2666	CACAGGTGCAGTGTTAAGATGATTGGACTTTGAAAAGCTGGCTGTACATA	10	+	117605645-117605694	10qD2	Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mdm-1	Mdm-1
Mus musculus	RefSeq	ILMN_209339	ILMN_209339	MDM1	NM_148922.2	NM_148922.2		17245	27229284	NM_148922.2	Mdm1	NP_683724.1	ILMN_2659306	000130743	S	1730	TCCATCTAAAGTGAAGCCACCAGGCCTCGAGCAGAGGAGGAGAGCGTCCT	10	+	117596735-117596784	10qD2	Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mdm-1	Mdm-1
Mus musculus	RefSeq	ILMN_209339	ILMN_209339	MDM1	NM_148922.2	NM_148922.2		17245	27229284	NM_148922.2	Mdm1	NP_683724.1	ILMN_1231182	003420523	S	1063	CCCAGTATTTCTATAAAGCTGGAGCTTGGACCCGGGTGAAGGAGAACCTG	10	+	117589272-117589321	10qD2	Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mdm-1	Mdm-1
Mus musculus	RefSeq	ILMN_213494	ILMN_245658	9130019O22RIK	NM_030226.2	NM_030226.2		78921	141801774	NM_030226.2	9130019O22Rik	NP_084502.1	ILMN_2637604	005700441	S	3819	GGCAGAGCTTGTGAAGAGAGCTGTTAGTACTTTGTAAAGCTGAGAATCCA	7	-	134525783-134525832	7qF3	Mus musculus RIKEN cDNA 9130019O22 gene (9130019O22Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219238	ILMN_245658	9130019O22RIK	NM_030226.2	NM_030226.2		78921	141801774	NM_030226.2	9130019O22Rik	NP_084502.1	ILMN_1225405	004570114	S	2650	TCACAGCTACAGCTCCCATGAGTTGATTTCAGCATTGGAAGGAGAGAACC	7	-	134526952-134527001	7qF3	Mus musculus RIKEN cDNA 9130019O22 gene (9130019O22Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_243701	ILMN_243701	4930544G21RIK	NM_172430.2	NM_172430.2		77629	66773172	NM_172430.2	4930544G21Rik	NP_766018.2	ILMN_2841307	004010278	S	6489	GCCACAACCTCCTTACCCCATGGTAGAAATCTTTTTCAGACCTCAGTGGG	1	-	83252295-83252344	1qC5	Mus musculus RIKEN cDNA 4930544G21 gene (4930544G21Rik), mRNA.				mKIAA1678; AI852220; A930009L15Rik	mKIAA1678; AI852220; A930009L15Rik
Mus musculus	RefSeq	ILMN_216197	ILMN_216197	MRPL45	NM_025927.3	NM_025927.3		67036	142368142	NM_025927.3	Mrpl45	NP_080203.1	ILMN_2668369	006770358	S	1568	GTGATGCGGCTTCCAGGAACTCTAGATGGGAAGACCTTAGAGTGTCTACA	11	+	97190511-97190560	11qD	Mus musculus mitochondrial ribosomal protein L45 (Mrpl45), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	R75241; 2600005P05Rik; AU043542	R75241; 2600005P05Rik; AU043542
Mus musculus	RefSeq	ILMN_242191	ILMN_242191	RSF1	NM_001081267.1	NM_001081267.1		233532	124486904	NM_001081267.1	Rsf1	NP_001074736.1	ILMN_2921163	006220332	S	1595	GAAAGCAAGGTTAGAGGAGCCTGGGCTTCTGAACATGGACATGCCTCTCG	7	+	104810161-104810210	7qE2	Mus musculus remodeling and spacing factor 1 (Rsf1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm164; MGC90806; Hbxap; p325; XAP8	Gm164; MGC90806; Hbxap; p325; XAP8
Mus musculus	RefSeq	ILMN_215329	ILMN_242191	RSF1	NM_001081267.1	NM_001081267.1		233532	124486904	NM_001081267.1	Rsf1	NP_001074736.1	ILMN_2658182	005960072	S	4681	ATCTGTGAGGGCCCAAAACAGAATTTAGGGTGGGAGAAAGCACCTGTGCT	7	+	104834844-104834893	7qE2	Mus musculus remodeling and spacing factor 1 (Rsf1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm164; MGC90806; Hbxap; p325; XAP8	Gm164; MGC90806; Hbxap; p325; XAP8
Mus musculus	RefSeq	ILMN_211051	ILMN_211051	OLFR1309	NM_146447.1	NM_146447.1		258439	33238983	NM_146447.1	Olfr1309	NP_666658.1	ILMN_2961541	004260576	S	735	TTCCACTCTTTCAGCACACATCACTGTGGTCATCTTGTTCTTTGGGCCAC	2	-	111823469-111823518	2qE3	Mus musculus olfactory receptor 1309 (Olfr1309), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR245-5; MGC157601	MOR245-5; MGC157601
Mus musculus	RefSeq	ILMN_186445	ILMN_186445	PATZ1	NM_019574.2	NM_019574.2		56218	118130669	NM_019574.2	Patz1	NP_062520.1	ILMN_2797594	000520370	S	2407	CCCCAACTCTAAGGCACTCTTGGGCCTCGCTTGGTAGTTTTGGTCCCTCC	11	+	3208393-3208442	11qA1	Mus musculus POZ (BTB) and AT hook containing zinc finger 1 (Patz1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IDA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IPI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Patz; 8430401L15Rik; Zfp278; Mazr; AI447519	Patz; 8430401L15Rik; Zfp278; Mazr; AI447519
Mus musculus	RefSeq	ILMN_186445	ILMN_186445	PATZ1	NM_019574.2	NM_019574.2		56218	118130669	NM_019574.2	Patz1	NP_062520.1	ILMN_2435612	006180121	S	2484	CTCTGTCCTCAAAAGAAGTTAAGTAGGGTCTCTACCCTCTTATGGCCAAC	11	+	3208470-3208519	11qA1	Mus musculus POZ (BTB) and AT hook containing zinc finger 1 (Patz1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IDA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IPI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Patz; 8430401L15Rik; Zfp278; Mazr; AI447519	Patz; 8430401L15Rik; Zfp278; Mazr; AI447519
Mus musculus	MEEBO	ILMN_223999	ILMN_223999	CXCL10	scl26371.6_22				10946575	NM_021274	Cxcl10		ILMN_1214419	002190215	S	745	CTACAAATTTAAGTTTGTAAGGACGAACTTAACCACCATCTTCCCAAGGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211417	ILMN_211417	PSIP1	NM_133948.4	NM_133948.4		101739	146149156	NM_133948.4	Psip1	NP_598709.1	ILMN_2617478	000430204	S	2851	CTGAGCGATCAGGCCAGCTGTTGGTTTTTATCAGGCAGGATAGTTCATCC				4qC3	Mus musculus PC4 and SFRS1 interacting protein 1 (Psip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AU015605; Psip2; AA408851; Ledgfa; Ledgfb	AU015605; Psip2; AA408851; Ledgfa; Ledgfb
Mus musculus	RefSeq	ILMN_211417	ILMN_211417	PSIP1	NM_133948.4	NM_133948.4		101739	146149156	NM_133948.4	Psip1	NP_598709.1	ILMN_2615678	004280520	S	1701	CTCAAGAGAGTAATCATCCACAGCATAATGGTGATAGTAACGAAGACGGC				4qC3	Mus musculus PC4 and SFRS1 interacting protein 1 (Psip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AU015605; Psip2; AA408851; Ledgfa; Ledgfb	AU015605; Psip2; AA408851; Ledgfa; Ledgfb
Mus musculus	Riken	ILMN_203674	ILMN_203674	COPZ1	ri|9530028F20|PX00112I09|AK079205|1299					AK079205	Copz1		ILMN_1223544	004220072	S	953	ACCTATTCCTTAGAGCCCGGGATTAGTGGGAAATCTGAGCCACACTGGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence ISS]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211737	ILMN_211737	4732421G10RIK	scl20512.4.1_251	NM_177844.1			29244421	NM_177844.1	4732421G10Rik		ILMN_2619022	006520377	S	2967	CTCTTCACTGGCTAGGGTTTGACCCAGAAAGTAGGGGGAGGAGTGCTTCC										
Mus musculus	RefSeq	ILMN_198052	ILMN_198052	LOC280144	XM_207127.2	XM_207127.2			38080993	XM_207127.2	LOC280144		ILMN_1223242	005310372	S	474	ACCAGGGCACCCTAACACACCTGAAAAGGCTGCTATGAACATAGTGGAGC										
Mus musculus	RefSeq	ILMN_235729	ILMN_235729	CALM5	NM_001008706.1	NM_001008706.1		494124	56785417	NM_001008706.1	Calm5	NP_001008706.1	ILMN_3160926	006130520	S	186	GTACACTAAAGAGCAGGAGCTGCAGGCTATGTTCAGTGTCCTTGACCAGA	13	+	3853739-3853788	13qA1	Mus musculus calmodulin 5 (Calm5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Scarf2; AY314008	Scarf2; AY314008
Mus musculus	RefSeq	ILMN_210483	ILMN_210483	CUX2	NM_007804.2	NM_007804.2		13048	40789276	NM_007804.2	Cux2	NP_031830.2	ILMN_2971011	000510543	S	4651	GAGAAAATGGCCAACTTGAACAGTATAATCTACCGGCTGGAGAGGGCTGC	5	-	122310637-122310686	5qF	Mus musculus cut-like homeobox 2 (Cux2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Cux-2; ENSMUSG00000072641; Cux2	Cux-2; ENSMUSG00000072641; Cux2
Mus musculus	RefSeq	ILMN_210483	ILMN_210483	CUX2	NM_007804.2	NM_007804.2		13048	40789276	NM_007804.2	Cux2	NP_031830.2	ILMN_1234471	002060554	S	4874	GTTGTATCACTAGTTACCTGAAGTTGTGTGTGAGCAGATGCCGCCGCCTC	5	-	122310414-122310463	5qF	Mus musculus cut-like homeobox 2 (Cux2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Cux-2; ENSMUSG00000072641; Cux2	Cux-2; ENSMUSG00000072641; Cux2
Mus musculus	RefSeq	ILMN_210483	ILMN_210483	CUX2	NM_007804.2	NM_007804.2		13048	40789276	NM_007804.2	Cux2	NP_031830.2	ILMN_1248236	001050132	S	501	CAGTAAAAGAAGTCGGGAGGCAGAGGCGGCGTTCCTGAGTGTTTATAAGC	5	-	122348303-122348352	5qF	Mus musculus cut-like homeobox 2 (Cux2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Cux-2; ENSMUSG00000072641; Cux2	Cux-2; ENSMUSG00000072641; Cux2
Mus musculus	RefSeq	ILMN_201116	ILMN_201116	LOC382010	XM_356076.1	XM_356076.1			38089258	XM_356076.1	LOC382010		ILMN_2541142	000730673	S	892	AGCTGCAACACACGGGAAAGTGATGGTCGACGAGAAGGCCTGGAACAACC										
Mus musculus	RefSeq	ILMN_187110	ILMN_262052	RALGPS1	NM_175211.4	NM_175211.4		241308	146198605	NM_175211.4	Ralgps1	NP_780420.1	ILMN_2750687	003170482	S	1330	GTAGTTGAAAGTAAGAGTGCGACATTCCCATCGGAGAAGGCCAGGCACCT				2qB	Mus musculus Ral GEF with PH domain and SH3 binding motif 1 (Ralgps1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	RALGPS1A; mKIAA0351; 5830418G11Rik; RALGEF2; AI854138; AI853783	RALGPS1A; mKIAA0351; 5830418G11Rik; RALGEF2; AI854138; AI853783
Mus musculus	RefSeq	ILMN_247384	ILMN_247384	RFX7	NM_001033536.1	NM_001033536.1		319758	88703054	NM_001033536.1	Rfx7	NP_001028708.1	ILMN_3025681	000460717	I	295	AACCGTGACGAGAACCGCGAGGAGAACCGGGAGAGGAACCGTGACGAGAG	9	+	72380341-72380390	9qD	Mus musculus regulatory factor X, 7 (Rfx7), mRNA. XM_925573			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	D130086K05Rik; 2510005N23Rik; 9930116O05Rik	D130086K05Rik; 2510005N23Rik; 9930116O05Rik
Mus musculus	RefSeq	ILMN_210979	ILMN_210979	ECD	NM_027475.1	NM_027475.1		70601	28076956	NM_027475.1	Ecd	NP_081751.1	ILMN_2933530	004760441	S	2685	CTTAGTGTTCAGTCTGTGACATTCTGCACGCGCTCCTAATTGAGGGTAAG	14	-	19108764-19108813	14qA3	Mus musculus ecdysoneless homolog (Drosophila) (Ecd), mRNA.				5730461K03Rik; Hsgt1	5730461K03Rik; Hsgt1
Mus musculus	Riken	ILMN_202810	ILMN_202810	JAK1	ri|6720490F02|PX00060L03|AK033004|2039					AK033004	Jak1		ILMN_2552473	003400471	S	1844	TCTTTCCACTCACCAATGAGCTGTGAGATAGCACAAGCTGCGCCGGTGGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA];  [goid 4718] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_242123	ILMN_242123	SYCP1	NM_011516.1	NM_011516.1		20957	45597448	NM_011516.1	Sycp1	NP_035646.1	ILMN_2854384	004250181	S	2660	GTGGCAAATCCAAAGATAACAGAGATAATCTGCGGGCATCTGCCAAAAGC	3	-	102644801-102644850	3qF2.2	Mus musculus synaptonemal complex protein 1 (Sycp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence TAS]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A structural unit of the synaptonemal complex found between the lateral elements [goid 801] [evidence IDA]; A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them [goid 802] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence ISS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IDA]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SCP1	SCP1
Mus musculus	RefSeq	ILMN_187363	ILMN_240129	UFD1L	NM_011672.3	NM_011672.3		22230	142367932	NM_011672.3	Ufd1l	NP_035802.2	ILMN_2443482	006980731	S	1322	GTGCAGTGTCTTTAGCCCATCATGGCTACTCAGGCCAGCACTTGAGTACC	16	+	18821135-18821184	16qA3	Mus musculus ubiquitin fusion degradation 1 like (Ufd1l), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		Ufd1	Ufd1
Mus musculus	RefSeq	ILMN_217883	ILMN_217883	SMN1	NM_011420.2	NM_011420.2		20595	145386573	NM_011420.2	Smn1	NP_035550.1	ILMN_1236796	002750719	S	1087	ACCGACCAGTGGAGTGTGCGTGTCGGAAGGCAGTCTACCCAGTCGTGACT				13qD1	Mus musculus survival motor neuron 1 (Smn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Smn; Gemin1; AI849087	Smn; Gemin1; AI849087
Mus musculus	MEEBO	ILMN_189174	ILMN_189174	4921517J08RIK	scl50516.1.9_19				51770388	XM_128768	4921517J08Rik		ILMN_2458992	000020019	S	20	GGTTCCCTAGCGGTCACAGTGACTCCTCACTTTACGTCTCTACTGGGAAA										
Mus musculus	MEEBO	ILMN_189174	ILMN_189174	4921517J08RIK	scl50516.1.9_19				51770388	XM_128768	4921517J08Rik		ILMN_2458989	003130201	S	18	GAGGTTCCCTAGCGGTCACAGTGACTCCTCACTTTACGTCTCTACTGGGA										
Mus musculus	MEEBO	ILMN_189174	ILMN_189174	4921517J08RIK	scl50516.1.9_19				51770388	XM_128768	4921517J08Rik		ILMN_1226373	003440300	S	17	TGAGGTTCCCTAGCGGTCACAGTGACTCCTCACTTTACGTCTCTACTGGG										
Mus musculus	RefSeq	ILMN_252499	ILMN_252499	SEMA3B	NM_009153.2	NM_009153.2		20347	112421072	NM_009153.2	Sema3b	NP_033179.2	ILMN_3078526	006450672	I	82	GTGTGTCTCTGATTGTGGCCAGGCGGGGCACCCTTGGTGGAGAGGAAACG	9	-	107507486-107507486:107507603-107507651	9qF1	Mus musculus sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B (Sema3b), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		SemA; sema5; semaV; Semaa; AW208495; LUCA-1	SemA; sema5; semaV; Semaa; AW208495; LUCA-1
Mus musculus	RefSeq	ILMN_201460	ILMN_241091	EG638262	XR_001875.1	XR_001875.1		638262	94396975	XR_001875.1	EG638262		ILMN_2542373	006960100	S	533	ACTGGTAGAGCAGGCTGACCAGGGAACATCCTATGGTGAAGAAAATAGAT	14	+	43861333-43861382	14qC1	PREDICTED: Mus musculus predicted gene, EG638262 (EG638262), misc RNA.					
Mus musculus	RefSeq	ILMN_214382	ILMN_214382	RASSF1	NM_019713.3	NM_019713.3		56289	118130657	NM_019713.3	Rassf1	NP_062687.1	ILMN_2954265	005690187	S	1429	CTACAGTGGCTCAGTCAGTGCCTCCTCTAAGGGAAAGGTTGCTGGACCAG	9	+	107464369-107464418	9qF1	Mus musculus Ras association (RalGDS/AF-6) domain family member 1 (Rassf1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rassf1A; REH3P21; Rassf1B; RDA32; AA536941; 123F2; NORE2A; Rassf1C; AU044980	Rassf1A; REH3P21; Rassf1B; RDA32; AA536941; 123F2; NORE2A; Rassf1C; AU044980
Mus musculus	RefSeq	ILMN_214382	ILMN_214382	RASSF1	NM_019713.3	NM_019713.3		56289	118130657	NM_019713.3	Rassf1	NP_062687.1	ILMN_2647435	000380739	S	1333	CAAGCAATTAAGGTAGAGTCTGGGGTTCCCTCTTACCGTGCCTTCTGACT	9	+	107464273-107464322	9qF1	Mus musculus Ras association (RalGDS/AF-6) domain family member 1 (Rassf1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rassf1A; REH3P21; Rassf1B; RDA32; AA536941; 123F2; NORE2A; Rassf1C; AU044980	Rassf1A; REH3P21; Rassf1B; RDA32; AA536941; 123F2; NORE2A; Rassf1C; AU044980
Mus musculus	RefSeq	ILMN_256814	ILMN_256814	OLFR708	NM_001011542.1	NM_001011542.1		258173	58531211	NM_001011542.1	Olfr708	NP_001011542.1	ILMN_2804185	003140750	S	857	ATCCCATCATTTACAGCCTGAGAAACAAGGATGTGAAAGGGGCTCTCAAG	7	+	114052680-114052729	7qE3	Mus musculus olfactory receptor 708 (Olfr708), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR260-6P	MOR260-6P
Mus musculus	RefSeq	ILMN_216400	ILMN_216400	GTF3A	NM_025652.2	NM_025652.2		66596	142345515	NM_025652.2	Gtf3a	NP_079928.1	ILMN_2670727	003170639	S	493	TAAGAAGCACCAGCAGCTGAGAACCCATCAGTGCCAGCACACCAGCGAGC	5	+	147763479-147763528	5qG3	Mus musculus general transcription factor III A (Gtf3a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	5330403M05Rik; 2610111I01Rik; 2010015D03Rik	5330403M05Rik; 2610111I01Rik; 2010015D03Rik
Mus musculus	RefSeq	ILMN_187492	ILMN_216400	GTF3A	NM_025652.2	NM_025652.2		66596	142345515	NM_025652.2	Gtf3a	NP_079928.1	ILMN_2444616	005490020	S	536	TGGTGTGCTGGCACTGATGGGTTCTCAGCTGCTGGTGCTTCTTAAAGGCC	5	+	147763522-147763538:147764303-147764335	5qG3	Mus musculus general transcription factor III A (Gtf3a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	5330403M05Rik; 2610111I01Rik; 2010015D03Rik	5330403M05Rik; 2610111I01Rik; 2010015D03Rik
Mus musculus	RefSeq	ILMN_187461	ILMN_236954	ZCCHC8	NM_027494.2	NM_027494.2		70650	142373221	NM_027494.2	Zcchc8	NP_081770.2	ILMN_2454880	005050338	S	2341	CAGGGATGCTTGGTCCGGGTTAGACTATTTTTGGATCGTGAGTGTCTGTC	5	-	124150102-124150151	5qF	Mus musculus zinc finger, CCHC domain containing 8 (Zcchc8), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	5730565F05Rik	5730565F05Rik
Mus musculus	RefSeq	ILMN_187461	ILMN_236954	ZCCHC8	NM_027494.2	NM_027494.2		70650	142373221	NM_027494.2	Zcchc8	NP_081770.2	ILMN_2483297	003710273	S	568	GGGGCAACCGCTACTAAATGAAAACCCTCAGCTTACGGAAGGATGGGAAA	5	-	124159397-124159446	5qF	Mus musculus zinc finger, CCHC domain containing 8 (Zcchc8), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	5730565F05Rik	5730565F05Rik
Mus musculus	RefSeq	ILMN_196942	ILMN_196942	LOC208791	XM_151491.2	XM_151491.2			38050354	XM_151491.2	LOC208791		ILMN_1213631	002450195	S	1344	CTGTTCTGACTATGAAGACATTGAGGTAACCCTGAACCCCATCACGGGGG										
Mus musculus	Riken	ILMN_203163	ILMN_203163	9230116M18RIK	ri|9230116M18|PX00062C04|AK033831|1713					AK033831	9230116M18Rik		ILMN_2555214	001690477	S	1418	TGCCCCTATTCTTGGCACCAGCCCTGCAGTTGATTAGACTTAGGTTCACC										
Mus musculus	RefSeq	ILMN_241266	ILMN_241266	ZDHHC18	NM_001017968.2	NM_001017968.2		503610	114326531	NM_001017968.2	Zdhhc18	NP_001017968.2	ILMN_3162113	007560082	S	1048	TGGCCCACTGCCTCCCAGCCTGATTGACCGGCGAGGATTCGTGCAGTCTG	4	-	133164656-133164688:133166285-133166301	4qD2.3	Mus musculus zinc finger, DHHC domain containing 18 (Zdhhc18), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190095	ILMN_211631	SLC12A2	NM_009194.2	NM_009194.2		20496	124517715	NM_009194.2	Slc12a2	NP_033220.2	ILMN_2467140	002570367	S	310	TGAGATTTGCATAACCAAAGAGTAATTCCAGCCGCGATGCGGTGGGTGTG	18	+	58037678-58037727	18qD3	Mus musculus solute carrier family 12, member 2 (Slc12a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	sy-ns; Nkcc1; mBSC2	sy-ns; Nkcc1; mBSC2
Mus musculus	RefSeq	ILMN_211631	ILMN_211631	SLC12A2	NM_009194.2	NM_009194.2		20496	124517715	NM_009194.2	Slc12a2	NP_033220.2	ILMN_2617892	000830022	S	4110	CACACAGTTTCAGAAAAAACAAGGGAAGAATACTATAGATGTCTGGTGGC	18	+	58096020-58096069	18qD3	Mus musculus solute carrier family 12, member 2 (Slc12a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	sy-ns; Nkcc1; mBSC2	sy-ns; Nkcc1; mBSC2
Mus musculus	RefSeq	ILMN_211631	ILMN_211631	SLC12A2	NM_009194.2	NM_009194.2		20496	124517715	NM_009194.2	Slc12a2	NP_033220.2	ILMN_2700059	003400546	S	7379	GTGACAGACGCCTTTGTAATGTTTTAACCCTGAGCATTGCGGTTGCTGCT	18	+	58106371-58106420	18qD3	Mus musculus solute carrier family 12, member 2 (Slc12a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	sy-ns; Nkcc1; mBSC2	sy-ns; Nkcc1; mBSC2
Mus musculus	RefSeq	ILMN_211631	ILMN_211631	SLC12A2	NM_009194.2	NM_009194.2		20496	124517715	NM_009194.2	Slc12a2	NP_033220.2	ILMN_3146420	004070025	A	6894	CGGTGGCTAACACTGGCTGCCTGGTCAAACAGTCTCAAGGTTGCAGTCGT	18	+	58105886-58105935	18qD3	Mus musculus solute carrier family 12, member 2 (Slc12a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	sy-ns; Nkcc1; mBSC2	sy-ns; Nkcc1; mBSC2
Mus musculus	RefSeq	ILMN_211631	ILMN_211631	SLC12A2	NM_009194.2	NM_009194.2		20496	124517715	NM_009194.2	Slc12a2	NP_033220.2	ILMN_3068197	004260201	I	1211	AAGAGGATGCTACTACGGCTGGGAGGCAGGCTGGCGGCGGGGTGCGCGGA	18	+	58038579-58038628	18qD3	Mus musculus solute carrier family 12, member 2 (Slc12a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	sy-ns; Nkcc1; mBSC2	sy-ns; Nkcc1; mBSC2
Mus musculus	RefSeq	ILMN_201004	ILMN_201004	LOC381947	XM_355970.1	XM_355970.1			38087874	XM_355970.1	LOC381947		ILMN_1245548	005870167	S	231	TTGCAGCGGATTCCCGGGCCACAGCAGGCCTCTACTACGTAGACAGCGAG										
Mus musculus	Riken	ILMN_206086	ILMN_206086	SEZ6	ri|6430514K24|PX00315K06|AK032277|2233					AK032277	Sez6		ILMN_1245173	004670482	S	1986	ATTCATTTATGCTGGGCACAGTGGCACACAGAGGCTGAGGGAGGCAGATC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_193015	ILMN_193015	U46068	NM_153418.2	NM_153418.2		228801	59939909	NM_153418.2	U46068	NP_700467.2	ILMN_2493371	006270301	S	1570	CCAGCCAGGAGTGTGGAAGCCTACTGTGTAGACTACCCCCCTGCAGTTAA	2	+	154046013-154046062	2qH1	Mus musculus cDNA sequence U46068 (U46068), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lplunc1; RP23-154J12.1	Lplunc1; RP23-154J12.1
Mus musculus	RefSeq	ILMN_215621	ILMN_322429	C130073F10RIK	XR_035376.1	XR_035376.1		242574	149252702	XR_035376.1	C130073F10Rik		ILMN_1228176	007040070	S	837	GACTGCCTTCACCAACTTCTGCTTGTGTAGTAGTATTGAAATTAAAGTGG				4qC6	PREDICTED: Mus musculus RIKEN cDNA C130073F10 gene (C130073F10Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_196341	ILMN_196341	KLHL22	NM_145479.3	NM_145479.3		224023	141802617	NM_145479.3	Klhl22	NP_663454.2	ILMN_1246018	003310278	S	2521	GCACTCCTAGCCATAGCCAAAGTTTGTGGCTCCCTTTCTGTGAACCGTGG	16	+	17776989-17777038	16qA3	Mus musculus kelch-like 22 (Drosophila) (Klhl22), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Kelchl; 2610318I18Rik	Kelchl; 2610318I18Rik
Mus musculus	RefSeq	ILMN_196341	ILMN_196341	KLHL22	NM_145479.3	NM_145479.3		224023	141802617	NM_145479.3	Klhl22	NP_663454.2	ILMN_1234514	005260070	S	1673	GTACTTAATTGGAGGGGACAATAATGTCCAAGGATTTCGAGCTGAGTCCC	16	+	17764719-17764740:17771797-17771824	16qA3	Mus musculus kelch-like 22 (Drosophila) (Klhl22), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Kelchl; 2610318I18Rik	Kelchl; 2610318I18Rik
Mus musculus	RefSeq	ILMN_196341	ILMN_196341	KLHL22	NM_145479.3	NM_145479.3		224023	141802617	NM_145479.3	Klhl22	NP_663454.2	ILMN_1219941	000510634	S	2493	TGGGAAGAGTTTGACAACTCTAGCGAGAGCACTCCTAGCCATAGCCAAAG	16	+	17776961-17777010	16qA3	Mus musculus kelch-like 22 (Drosophila) (Klhl22), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Kelchl; 2610318I18Rik	Kelchl; 2610318I18Rik
Mus musculus	RefSeq	ILMN_197103	ILMN_250932	ARHGAP30	NM_001005508.1	NM_001005508.1		226652	53828719	NM_001005508.1	Arhgap30	NP_001005508.1	ILMN_2526918	005560333	S	3094	GCAATGTGTAGCAAGATCCATGTAGCACCTGCAAGCCCATGTCCAAGGCC	1	+	173339029-173339078	1qH3	Mus musculus Rho GTPase activating protein 30 (Arhgap30), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FLJ00267; mFLJ00267; Gm102; 6030405P05Rik; MGC99989	FLJ00267; mFLJ00267; Gm102; 6030405P05Rik; MGC99989
Mus musculus	RefSeq	ILMN_250932	ILMN_250932	ARHGAP30	NM_001005508.1	NM_001005508.1		226652	53828719	NM_001005508.1	Arhgap30	NP_001005508.1	ILMN_2954575	004250544	S	4317	GAGGGAATGTCACTCAATTTGGCTCTAGCACTGTCTCTGCACAGGCTGGG	1	+	173340252-173340301	1qH3	Mus musculus Rho GTPase activating protein 30 (Arhgap30), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FLJ00267; mFLJ00267; Gm102; 6030405P05Rik; MGC99989	FLJ00267; mFLJ00267; Gm102; 6030405P05Rik; MGC99989
Mus musculus	Riken	ILMN_203483	ILMN_203483	5930402G23RIK	ri|5930402G23|PX00055D07|AK031074|2650					AK031074	5930402G23Rik		ILMN_1238994	004120010	S	2404	ACAGAAGTCGTGTTTGCCAAGCGAGGCGGATGCGGTGGCTGTTTCCCACA										
Mus musculus	RefSeq	ILMN_198598	ILMN_230140	LDOC1	NM_001018087.1	NM_001018087.1		434784	66348057	NM_001018087.1	Ldoc1	NP_001018097.1	ILMN_1226661	002340504	S	264	CCCTCACGGTTTAGCGGCGAGAGTGGTCGGCTCCCTGAGTTTATCATGCA	X	+	58963052-58963101	XqA6	Mus musculus leucine zipper, down-regulated in cancer 1 (Ldoc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Gm366; Mar7; Mart7	Gm366; Mar7; Mart7
Mus musculus	RefSeq	ILMN_230140	ILMN_230140	LDOC1	NM_001018087.1	NM_001018087.1		434784	66348057	NM_001018087.1	Ldoc1	NP_001018097.1	ILMN_2898506	006110500	S	1178	TTGCACAGCACGTTTCCTTTCAGAACTGCAGCAGCCTCACAGATGTGTCC	X	+	58963966-58964015	XqA6	Mus musculus leucine zipper, down-regulated in cancer 1 (Ldoc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Gm366; Mar7; Mart7	Gm366; Mar7; Mart7
Mus musculus	RefSeq	ILMN_193454	ILMN_229227	SLC7A4	NM_144852.3	NM_144852.3		224022	142371084	NM_144852.3	Slc7a4	NP_659101.2	ILMN_2639360	000940538	S	2096	TCAGAGTCTCAACACAGGAACGGAGTCTTCGGCTATCATGGACTAGGCTG	16	-	17573196-17573245	16qA3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 4 (Slc7a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	AI853530; MGC27672	AI853530; MGC27672
Mus musculus	RefSeq	ILMN_193454	ILMN_229227	SLC7A4	NM_144852.3	NM_144852.3		224022	142371084	NM_144852.3	Slc7a4	NP_659101.2	ILMN_1252581	005420102	S	2942	TTGCCTCCGTATCCCCTGGAAATGTTTTCAGATGGATCCCTTGGGTTCTC	16	-	17572350-17572399	16qA3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 4 (Slc7a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	AI853530; MGC27672	AI853530; MGC27672
Mus musculus	RefSeq	ILMN_196717	ILMN_319233	LOC100038897	XM_001471777.1	XM_001471777.1		100038897	149255113	XM_001471777.1	LOC100038897	XP_001471827.1	ILMN_1252006	007650433	S	1036	GGACAAATCTACTCAGGTGAATGGGCATGCTTTGCCCTAAAGCCTTCAGA	6	-	130065300-130065349	6qF3	PREDICTED: Mus musculus hypothetical protein LOC100038897 (LOC100038897), mRNA.					
Mus musculus	RefSeq	ILMN_220150	ILMN_319233	LOC100038897	XM_001471777.1	XM_001471777.1		100038897	149255113	XM_001471777.1	LOC100038897	XP_001471827.1	ILMN_2718242	004250296	S	763	CCAATCTAAACTTGACATGAAAATAAAGAAAATGAACTTTACGTCTAGAG	6	-	130065651-130065689:130068981-130068991	6qF3	PREDICTED: Mus musculus hypothetical protein LOC100038897 (LOC100038897), mRNA.					
Mus musculus	RefSeq	ILMN_189214	ILMN_232092	IL2RA	NM_008367.2	NM_008367.2		16184	34556198	NM_008367.2	Il2ra	NP_032393.2	ILMN_1233474	000160390	S	3984	GTCTTCCCTTCTTCCCATTAGTAATAATAGCCCGTGTTTTAGAAGAACAC	2	+	11614435-11614484	2qA1	Mus musculus interleukin 2 receptor, alpha chain (Il2ra), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation [goid 50672] [evidence IMP]; Any process that modulates the frequency, rate or extent of resting T cell proliferation [goid 46013] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; The process of apoptosis in activated T cells [goid 6924] [evidence IMP]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with interleukin-2 [goid 19976] [evidence IPI]; Combining with interleukin-2 to initiate a change in cell activity [goid 4911] [evidence IMP]	CD25; Il2r; MGC130561; Ly-43	CD25; Il2r; MGC130561; Ly-43
Mus musculus	RefSeq	ILMN_192154	ILMN_259309	TGFBI	NM_009369.3	NM_009369.3		21810	145966862	NM_009369.3	Tgfbi	NP_033395.1	ILMN_2727663	004060327	S	1971	GGAGATGAGCTGGCAGACTCTGCCCTTGAAATCTTCAAACAGGCGTCAGC				13qB1	Mus musculus transforming growth factor, beta induced (Tgfbi), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	68kDa; MGC150270; Beta-ig; big-h3; AI181842; AI747162	68kDa; MGC150270; Beta-ig; big-h3; AI181842; AI747162
Mus musculus	RefSeq	ILMN_243369	ILMN_243369	OLFR1247	NM_146966.1	NM_146966.1		258968	22128998	NM_146966.1	Olfr1247	NP_667177.1	ILMN_2976477	004260347	S	548	TGGCACTTGTGTGCACTGACACCTACTTTATTGGCCTCACGGTAGTTGCC	2	-	89449660-89449709	2qE1	Mus musculus olfactory receptor 1247 (Olfr1247), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-6	MOR231-6
Mus musculus	RefSeq	ILMN_188284	ILMN_188284	UBE2B	NM_009458.2	NM_009458.2		22210	31560629	NM_009458.2	Ube2b	NP_033484.2	ILMN_2959247	002480544	S	1133	CTAGTCTGGTTCTGTCCAGCTCTGTATTTGGGCCACTTGTTAATGTGCGT	11	-	51829432-51829481	11qB1.3	Mus musculus ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae) (Ube2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The assembly and organization of the sperm flagellar axoneme, the bundle of microtubules and associated proteins that forms the core of the eukaryotic sperm flagellum, and is responsible for movement [goid 7288] [evidence IMP]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	E2-14k; Rad6b; HR6B; 2610301N02Rik	E2-14k; Rad6b; HR6B; 2610301N02Rik
Mus musculus	MEEBO	ILMN_224218	ILMN_224218	5430437P03RIK	scl33703.9.1_1				30794445	NM_026636	5430437P03Rik		ILMN_2776804	000520435	S	1123	TGCAAAGACCCTGCCAGACCCACGCGAGCTACAGCCTGCTGGAGGAGGAC										
Mus musculus	RefSeq	ILMN_202088	ILMN_314537	LOC100044395	XM_001472182.1	XM_001472182.1		100044395	149258658	XM_001472182.1	LOC100044395	XP_001472232.1	ILMN_2546905	000110408	S	208	TACCTGCTCTTCAGACCATTCAAGGGCTATGAAGGTTCTCTCATAAAGCT					PREDICTED: Mus musculus similar to RNA binding protein gene with multiple splicing (LOC100044395), mRNA.					
Mus musculus	RefSeq	ILMN_252876	ILMN_252876	PPIH	NM_028677.3	NM_028677.3		66101	71534274	NM_028677.3	Ppih	NP_082953.1	ILMN_2971758	001470703	S	645	TGCGATCCAGGACCTGGAAGTATCACAGTGTGGGGAAATGTAATCTAGAC	4	-	118972672-118972721	4qD2.1	Mus musculus peptidyl prolyl isomerase H (Ppih), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	CYPH; CYP-20; 4833408F11Rik; AI464484; D4Wsu43e; 2010111B15Rik; 1100001J08Rik	CYPH; CYP-20; 4833408F11Rik; AI464484; D4Wsu43e; 2010111B15Rik; 1100001J08Rik
Mus musculus	Riken	ILMN_201749	ILMN_201749	2810405F04RIK	ri|2810405F04|ZX00046M02|AK012991|1548					AK012991	2810405F04Rik		ILMN_1241179	006510255	S	1091	CAGTCATCATCATAGGTGGTCGTGGCTACATTCTGCTTATCCTTACTATC										
Mus musculus	RefSeq	ILMN_214292	ILMN_214292	MRPL50	NM_178603.4	NM_178603.4		28028	146198774	NM_178603.4	Mrpl50	NP_848718.1	ILMN_1247384	002650594	S	1936	AAGTAAAGGTGGAAGAAAGGGCAACGTGTTCTGGGTTCATCTCTTGGGAC				4qB1	Mus musculus mitochondrial ribosomal protein L50 (Mrpl50), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			AA408971; D4Wsu125e; AI317351	AA408971; D4Wsu125e; AI317351
Mus musculus	RefSeq	ILMN_211614	ILMN_245359	1700034E13RIK	NM_030097.1	NM_030097.1		78414	58037526	NM_030097.1	1700034E13Rik	NP_084373.1	ILMN_2617673	003840341	S	394	GTGGGCGGACCTTCCTGCCAGACAGACTAATTGTCCACCAGAGATCTTGT	18	+	52823302-52823351	18qD1	Mus musculus RIKEN cDNA 1700034E13 gene (1700034E13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212688	ILMN_212688	NCF1	NM_010876.2	NM_010876.2		17969	40254579	NM_010876.2	Ncf1	NP_035006.2	ILMN_2829457	003520300	S	2178	GAGGGAACCTTGATTGAGGAAACACCTCAGTGGTTAAGAGCACCAGCTGC	5	-	134697643-134697692	5qG2	Mus musculus neutrophil cytosolic factor 1 (Ncf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IMP]; Reactions triggered in response to the presence of a fungus that act to protect the cell or organism [goid 50832] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle contraction [goid 45986] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; The directed killing of a target cell by a leukocyte [goid 1909] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; catabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6742] [evidence ISA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IMP]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IDA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IMP]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence ISA]	NOXO2; p47<phox>; Ncf-1; p47phox	NOXO2; p47<phox>; Ncf-1; p47phox
Mus musculus	RefSeq	ILMN_212688	ILMN_212688	NCF1	NM_010876.2	NM_010876.2		17969	40254579	NM_010876.2	Ncf1	NP_035006.2	ILMN_1228585	004200458	S	2036	TTAGCAACTAATGACTAGTGTCATTTTAGTGTCATTAGTGATGCGGAGAC	5	-	134697786-134697835	5qG2	Mus musculus neutrophil cytosolic factor 1 (Ncf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IMP]; Reactions triggered in response to the presence of a fungus that act to protect the cell or organism [goid 50832] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle contraction [goid 45986] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; The directed killing of a target cell by a leukocyte [goid 1909] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; catabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6742] [evidence ISA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IMP]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IDA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IMP]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence ISA]	NOXO2; p47<phox>; Ncf-1; p47phox	NOXO2; p47<phox>; Ncf-1; p47phox
Mus musculus	RefSeq	ILMN_199324	ILMN_246245	LOC637448	XM_913129.2	XM_913129.2		637448	149269020	XM_913129.2	LOC637448	XP_918222.2	ILMN_2534840	005390221	S	1938	GACAACTTCTCCACCGTTCATTGACCTAGATGCTCATACTGAATATGGAC					PREDICTED: Mus musculus similar to putative pheromone receptor (LOC637448), mRNA.					
Mus musculus	RefSeq	ILMN_212940	ILMN_212940	4930539E08RIK	NM_172450.3	NM_172450.3		207819	146149258	NM_172450.3	4930539E08Rik	NP_766038.1	ILMN_1238069	000990112	S	4434	GGCTTGTTTTACCACTGAGTGCTCGCTCCAAACCTTGGACATTGTCTCTT				17qA3.3	Mus musculus RIKEN cDNA 4930539E08 gene (4930539E08Rik), mRNA.				9130014G02	9130014G02
Mus musculus	RefSeq	ILMN_218878	ILMN_218878	ITGA7	NM_008398.2	NM_008398.2		16404	112293268	NM_008398.2	Itga7	NP_032424.2	ILMN_1257880	001780161	S	3550	TGGGTCCTGATGGACATCCGGTGCCAGCCACTGCCTAACATCTGCTGTCC	10	+	128394870-128394907:128394908-128394919	10qD3	Mus musculus integrin alpha 7 (Itga7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	alpha7; [a]7	alpha7; [a]7
Mus musculus	RefSeq	ILMN_213470	ILMN_213470	PRR14	NM_145589.2	NM_145589.2		233895	34328356	NM_145589.2	Prr14	NP_663564.2	ILMN_2637321	005810280	S	2170	GTCACCTCTAGGAGCTCCAACTATTTGTCCATCCGTCCTTTAGGTAGGGG	7	+	134620164-134620174:134620175-134620213	7qF3	Mus musculus proline rich 14 (Prr14), mRNA.				BC006909; MGC6888	BC006909; MGC6888
Mus musculus	Riken	ILMN_206242	ILMN_206242	KIF3B	ri|C130035P16|PX00169E14|AK081541|2495					AK081541	KIF3B		ILMN_1240603	001940168	S	2297	CACCGTGATGCTCTGTGGAGGCAGTTCACAAGCCGACTATGAAGCAGAAG										
Mus musculus	RefSeq	ILMN_217055	ILMN_217055	MS4A4C	NM_029499.2	NM_029499.2		64380	62461603	NM_029499.2	Ms4a4c	NP_083775.1	ILMN_2678607	006620577	S	1102	AAATAAGTGGATTTAGCTGCTTTTGATCATGTACAAACACATGAATTATG	19	+	11501155-11501204	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 4C (Ms4a4c), mRNA.				Ms4a9; 5830413L19Rik; AI449185	Ms4a9; 5830413L19Rik; AI449185
Mus musculus	MEEBO	ILMN_223906	ILMN_223906	PPP1R14D	scl18808.6.1_35				19920330	NM_028104	Ppp1r14d		ILMN_1253015	006280750	S	556	CCTGACCTGGATACTGGCTGAAAAGTCTTGGATATGGACAAGGGCTGCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215208	ILMN_215208	BC053749	NM_183321.1	NM_183321.1		333193	34304002	NM_183321.1	BC053749	NP_899144.1	ILMN_2656776	000050176	S	2078	TCCTCTAGCCAGGTCACCTTCCAGGTCCTCAAGAATGCGGTTGAGGAGGG	7	-	31324491-31324533:31324534-31324540	7qB1	Mus musculus cDNA sequence BC053749 (BC053749), mRNA.				MGC59495	MGC59495
Mus musculus	RefSeq	ILMN_215208	ILMN_215208	BC053749	NM_183321.1	NM_183321.1		333193	34304002	NM_183321.1	BC053749	NP_899144.1	ILMN_3000298	003290379	S	2216	TTGCAAGTGTGGAGGCTCGAGTTTGGATCTCCTGAACCTGCATAGAGGTA	7	-	31324353-31324402	7qB1	Mus musculus cDNA sequence BC053749 (BC053749), mRNA.				MGC59495	MGC59495
Mus musculus	Riken	ILMN_203686	ILMN_203686	9530063F13RIK	ri|9530063F13|PX00113L15|AK035538|3417					AK035538	9530063F13Rik		ILMN_1242607	004920189	S	3336	AGACCAGGTGTGGTATAGGCCTGAAGTCCCAGCACTCAAGAGGCCTTAGG										
Mus musculus	MEEBO	ILMN_222331	ILMN_222331	LOC233400	scl0233400.8_1	XM_133543.3			38086928	XM_133543.3	LOC233400		ILMN_2767372	002060372	S	632	CCTCGATCGATCAGGACCTCCTTCTAGAGATGTGAACTCTCTCGATGAGA										
Mus musculus	MEEBO	ILMN_220585	ILMN_220585	1700019B03RIK	scl076406.5_2	XM_133982.2			38089036	XM_133982.2	1700019B03Rik		ILMN_2724078	001940209	S	1187	GAGCTCAGACTATTGCCCTCCGACTACCCCCATAAAACAAAGAACCCTCA										
Mus musculus	RefSeq	ILMN_196595	ILMN_196595	BC024537	NM_146237.1	NM_146237.1			22122808	NM_146237.1	BC024537		ILMN_1236387	006980209	S	1613	GGTGGAGATTTGCCCTTGCTGCCCTGATTAGCTGAAGCCTCGTGACTGGC										
Mus musculus	RefSeq	ILMN_196595	ILMN_196595	BC024537	NM_146237.1	NM_146237.1			22122808	NM_146237.1	BC024537		ILMN_1253796	000940544	S	1737	TATAAACAAGAAGAATCAGGACTGAATAAACTGCTGTTAGAAGGAAAAAA										
Mus musculus	RefSeq	ILMN_221230	ILMN_315284	MYLC2PL	NM_001085387.1	NM_001085387.1		59310	146229343	NM_001085387.1	Mylc2pl	NP_001078856.1	ILMN_2732795	004490528	S	418	CTACAGGAATCTGTGCTACGTCATCACACACGGCGAGGAGAAGGACTAGA				5qG2	Mus musculus myosin light chain 2, precursor lymphocyte-specific (Mylc2pl), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	PLRLC; 1700027I08Rik; PLRLC-A; PLRLC-B; PLRLC-C	PLRLC; 1700027I08Rik; PLRLC-A; PLRLC-B; PLRLC-C
Mus musculus	RefSeq	ILMN_200043	ILMN_200043	LOC384178	XM_357470.1	XM_357470.1			38079997	XM_357470.1	LOC384178		ILMN_2537396	000020687	S	71	GACAGAAAGGAGGAGGCGACGGCACAATAGAGTGTGGGCCTAAGTACCCA										
Mus musculus	RefSeq	ILMN_209140	ILMN_209140	MGLL	NM_011844.3	NM_011844.3		23945	31982751	NM_011844.3	Mgll	NP_035974.1	ILMN_2592925	006660719	S	376	CTGAGGCAAGTTCACCCAGGCGAACTCCACAGAATGTTCCCTACCAGGAC	6	+	88675719-88675768	6qD1	Mus musculus monoglyceride lipase (Mgll), mRNA.			Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: H2O + acylglycerol = a fatty acid + glycerol [goid 47372] [evidence IEA]	AA589436; Mgl	AA589436; Mgl
Mus musculus	RefSeq	ILMN_209140	ILMN_209140	MGLL	NM_011844.3	NM_011844.3		23945	31982751	NM_011844.3	Mgll	NP_035974.1	ILMN_2857957	002350451	S	3582	AGCCCCAGTTCCTTAGAGATAGGGGAACAGCCTCCCTCCACCATGTGAGC	6	+	88778069-88778118	6qD1	Mus musculus monoglyceride lipase (Mgll), mRNA.			Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: H2O + acylglycerol = a fatty acid + glycerol [goid 47372] [evidence IEA]	AA589436; Mgl	AA589436; Mgl
Mus musculus	RefSeq	ILMN_209140	ILMN_209140	MGLL	NM_011844.3	NM_011844.3		23945	31982751	NM_011844.3	Mgll	NP_035974.1	ILMN_2700408	005310328	S	3754	CCCAGTCACTCCCCACGTATACTCCTAGTGGGGAACCTGTATCGGCTTAG	6	+	88778241-88778290	6qD1	Mus musculus monoglyceride lipase (Mgll), mRNA.			Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: H2O + acylglycerol = a fatty acid + glycerol [goid 47372] [evidence IEA]	AA589436; Mgl	AA589436; Mgl
Mus musculus	RefSeq	ILMN_220154	ILMN_220154	AMELX	NM_009666.2	NM_009666.2		11704	127141014	NM_009666.2	Amelx	NP_033796.1	ILMN_2718293	006840246	S	489	TCTCATCAGCCCATGCAGCCCCAGTCACCTCTGCATCCCATGCAGCCCCT	X	-	165619824-165619873	XqF5	Mus musculus amelogenin X chromosome (Amelx), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AMGX; AMGL; Amg; ALGN; Amel	AMGX; AMGL; Amg; ALGN; Amel
Mus musculus	RefSeq	ILMN_210369	ILMN_322210	LOC100042074	XM_001477500.1	XM_001477500.1		100042074	149269744	XM_001477500.1	LOC100042074	XP_001477550.1	ILMN_2717961	003170431	S	1110	TCAGTTTCTAACTCATGAAAATGTATCACGTGTTCCTTAACTGTGTAAAT	18	+	43635147-43635196	18qB3	PREDICTED: Mus musculus similar to 6030465E24Rik protein (LOC100042074), mRNA.					
Mus musculus	RefSeq	ILMN_212248	ILMN_212248	FAM154B	NM_177894.4	NM_177894.4		330577	134288849	NM_177894.4	Fam154b	NP_808562.3	ILMN_1244341	003180242	S	2469	GAAAGTATAAAGTGCAAAGAAGGACGGGGAAGAGATACCAGTAAAGGACC	7	-	89781739-89781788	7qD3	Mus musculus family with sequence similarity 154, member B (Fam154b), mRNA.				D030069K18	D030069K18
Mus musculus	RefSeq	ILMN_218093	ILMN_230173	LOC674944	XM_982371.2	XM_982371.2		674944	149260290	XM_982371.2	LOC674944	XP_987465.1	ILMN_2691548	002120438	S	1834	GGCTAAATGCAACAATGGATTGTATAAACCAATATTTCACCCCCTTTCCT					PREDICTED: Mus musculus similar to dual specificity phosphatase 7, transcript variant 3 (LOC674944), mRNA.					
Mus musculus	RefSeq	ILMN_218779	ILMN_218779	CPHX	NM_175342.3	NM_175342.3		105594	141802126	NM_175342.3	Cphx	NP_780551.1	ILMN_1218639	000940551	S	1264	TGAGCTCCTGGGTCAGCTGTCAGAGCCTAGCTACAAGTTTAGATGGTCAC	14	+	26775462-26775511	14qA3	Mus musculus cytoplasmic polyadenylated homeobox (Cphx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU019881; AU023336; C80129; C330003B14Rik; Eso-1	AU019881; AU023336; C80129; C330003B14Rik; Eso-1
Mus musculus	RefSeq	ILMN_222169	ILMN_222169	OLFR1289	NM_146404.1	NM_146404.1		258399	33238985	NM_146404.1	Olfr1289	NP_666516.1	ILMN_2866545	005260497	S	101	CTGTGACCAATGACTCCCACCTCCATTCGCCTATGTACTTTCTGTTGGCC	2	+	111323689-111323738	2qE3	Mus musculus olfactory receptor 1289 (Olfr1289), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR245-6	MOR245-6
Mus musculus	RefSeq	ILMN_222169	ILMN_222169	OLFR1289	NM_146404.1	NM_146404.1		258399	33238985	NM_146404.1	Olfr1289	NP_666516.1	ILMN_1249853	003850373	S	307	GCCATGGCCTTTGATAGATACGTAGCAATTTGTAAGCCTCTAAGCTACAC	2	+	111323895-111323944	2qE3	Mus musculus olfactory receptor 1289 (Olfr1289), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR245-6	MOR245-6
Mus musculus	RefSeq	ILMN_210703	ILMN_210703	IL28B	NM_177396.1	NM_177396.1		338374	28893578	NM_177396.1	Il28b	NP_796370.1	ILMN_2608332	004730100	S	193	AAGGACATGAGGTGCAGTTCCCACCTCATCTCCAGGGCCTGGGACCTGAA	7	+	29308517-29308566	7qA3	Mus musculus interleukin 28B (Il28b), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISA]	IFL-1; INF-alpha; INF-lambda	IFL-1; INF-alpha; INF-lambda
Mus musculus	RefSeq	ILMN_218983	ILMN_218983	CPEB1	NM_007755.3	NM_007755.3		12877	145966797	NM_007755.3	Cpeb1	NP_031781.1	ILMN_1230062	006480360	S	2498	AGTTTTAAATGGTTTGTGGCACCTTATGTTGCACTTATGTTGGGGGAGGG				7qD3	Mus musculus cytoplasmic polyadenylation element binding protein 1 (Cpeb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]	AU024112; MGC159179; Cpeb; mCPEB	AU024112; MGC159179; Cpeb; mCPEB
Mus musculus	RefSeq	ILMN_219668	ILMN_219668	THEM5	NM_025416.1	NM_025416.1		66198	21539588	NM_025416.1	Them5	NP_079692.1	ILMN_2946970	002100373	S	831	GACAAGCAGACCGTCTATGCCAAGTCCTCCGGTGTTTTCCTTCAGCTGCA	3	+	94432047-94432076:94432366-94432385	3qF2.1	Mus musculus thioesterase superfamily member 5 (Them5), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1110038F21Rik; 1110007B02Rik	1110038F21Rik; 1110007B02Rik
Mus musculus	Riken	ILMN_203729	ILMN_203729	9830118G07RIK	ri|9830118G07|PX00118C03|AK036492|2635					AK036492	9830118G07Rik		ILMN_1214091	000270528	S	2411	GAGATGCCTGGCCTGTGTTGTTGGGATTTGTGTGCTGTGCAGCTCTGCTG										
Mus musculus	MEEBO	ILMN_192125	ILMN_192125	BC065120	scl46551.15_88				41053863	NM_183208	BC065120		ILMN_2485240	000460278	S	15	GCTGGGAGCTCTGGCTTCTACCTCATGGCAGTATGTTCATCCTATGTTAG										
Mus musculus	RefSeq	ILMN_200434	ILMN_200434	LOC384284	XM_357543.1	XM_357543.1			38081903	XM_357543.1	LOC384284		ILMN_1218600	000610484	S	573	GGCTTCACCTGTCAAGGCCTCCTACCTCTATCTGGGACGAGCAGAAGACA										
Mus musculus	RefSeq	ILMN_222703	ILMN_222703	CCR4	NM_009916.1	NM_009916.1		12773	6857772	NM_009916.1	Ccr4	NP_034046.1	ILMN_2753620	005870070	S	1025	GCTGCCTTAACCCCGTCATTTACTTCTTTCTCGGGGAGAAATTCCGCAAG	9	-	114401148-114401197	9qF3	Mus musculus chemokine (C-C motif) receptor 4 (Ccr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it [goid 2507] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IMP];  [goid 4945] [evidence IEA]	Cmkbr4; Sdf1r; MGC151418; LESTR	Cmkbr4; Sdf1r; MGC151418; LESTR
Mus musculus	RefSeq	ILMN_224334	ILMN_224334	EG574081	NM_001025351.1	NM_001025351.1		574081	70778926	NM_001025351.1	EG574081	NP_001020522.1	ILMN_3162035	000940707	S	91	GTCTGCTGGGGTCAGTGTGTTTCTGGCACTAGAGAGATTGGCATGTCTGG	8	+	19242060-19242109	8qA1.3	Mus musculus predicted gene, EG574081 (EG574081), mRNA.				Defb53	Defb53
Mus musculus	RefSeq	ILMN_222549	ILMN_222549	1700063I17RIK	NM_183272.2	NM_183272.2		68223	142351908	NM_183272.2	1700063I17Rik	NP_899095.1	ILMN_1248923	003800161	S	299	CCACCTTGCTATTGTGTCACAAATGAGGGACTCTGACATGGCAATGGTGG	7	+	138480158-138480193:138480194-138480207	7qF3	Mus musculus RIKEN cDNA 1700063I17 gene (1700063I17Rik), mRNA.					
Mus musculus	Riken	ILMN_206026	ILMN_206026	C230096K16RIK	ri|C230096K16|PX00177J13|AK049070|1722					AK049070	C230096K16Rik		ILMN_2576994	001500541	S	1040	GGGTTTATGAAGAAAGAGCCCCCTGAGTTATTCCGTGGCTTAAACGTGCG										
Mus musculus	Riken	ILMN_202319	ILMN_202319	4930426D05RIK	ri|4930426D05|PX00030N19|AK015205|1620					AK015205	4930426D05Rik		ILMN_2548681	003360674	S	1269	TAAGGGCCCTCCCATAGGACTCACACTGTTGACCCTGCTTAGCATTCAGA										
Mus musculus	Riken	ILMN_204455	ILMN_204455	B130014P16RIK	ri|B130014P16|PX00157A21|AK044945|2116					AK044945	B130014P16Rik		ILMN_1231867	006270176	S	1820	TGGTTAACAGATGAACTGCTGGGCAACTGGGTCTGGTGGATGTGTCCCAG										
Mus musculus	RefSeq	ILMN_208662	ILMN_208662	D930015E06RIK	NM_172681.3	NM_172681.3		229473	114205394	NM_172681.3	D930015E06Rik	NP_766269.3	ILMN_2977535	005870521	S	4559	CCATGCCAGTCTCGTCAACTCTCCATCCTACCTCACGAGCACCCGAAGCT				3qF1	Mus musculus RIKEN cDNA D930015E06 gene (D930015E06Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA0922	mKIAA0922
Mus musculus	RefSeq	ILMN_213912	ILMN_213912	OLFR251	NM_207553.1	NM_207553.1		404313	46430565	NM_207553.1	Olfr251	NP_997436.1	ILMN_2940827	006350392	S	842	ACACCCTTGTGGTACCCATGCTGAATCCTCTCATTTACAGCCTCAGAAAC					Mus musculus olfactory receptor 251 (Olfr251), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR170-15	MOR170-15
Mus musculus	RefSeq	ILMN_196831	ILMN_213912	OLFR251	NM_207553.1	NM_207553.1		404313	46430565	NM_207553.1	Olfr251	NP_997436.1	ILMN_2525956	001410500	S	601	GTGAGCTCTGCTGTAGTTGGAACAATTATCATTTTATCTAGCATCATTAT					Mus musculus olfactory receptor 251 (Olfr251), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR170-15	MOR170-15
Mus musculus	RefSeq	ILMN_213912	ILMN_213912	OLFR251	NM_207553.1	NM_207553.1		404313	46430565	NM_207553.1	Olfr251	NP_997436.1	ILMN_2642140	003140431	S	40	AGTTCATTCTTATGGGATTAACAGTTCAAAAAGAGCTCCAGTTGCCTCTG					Mus musculus olfactory receptor 251 (Olfr251), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR170-15	MOR170-15
Mus musculus	RefSeq	ILMN_221533	ILMN_221533	CSDC2	NM_145473.2	NM_145473.2		105859	141802879	NM_145473.2	Csdc2	NP_663448.1	ILMN_2736847	003710411	S	2238	CCCAGCCACGGATTCCCCATCCCTCCTGACACTGGCAATAAACTCAACTG	15	+	81781303-81781352	15qE1	Mus musculus cold shock domain containing C2, RNA binding (Csdc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI481750; Pippin; AI415250	AI481750; Pippin; AI415250
Mus musculus	RefSeq	ILMN_224158	ILMN_245956	RCN2	NM_011992.2	NM_011992.2		26611	114205427	NM_011992.2	Rcn2	NP_036122.2	ILMN_2775778	001030240	S	1266	GTCTTACCACTTCAGATGATCTAAATGTAGATTATAACTTTTGGCCTTTT	9	+	55906114-55906163	9qB	Mus musculus reticulocalbin 2 (Rcn2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	TCBP-49; TCBP49; AA408742	TCBP-49; TCBP49; AA408742
Mus musculus	RefSeq	ILMN_218550	ILMN_218550	PHTF2	NM_172992.2	NM_172992.2		68770	34328396	NM_172992.2	Phtf2	NP_766580.2	ILMN_1252206	006040598	S	4385	CGTTAACGTGGGCAGCAGTAGAGTTCTAGGAGGAAAATGTGCTAAGCAGC	5	-	20264788-20264837	5qA3	Mus musculus putative homeodomain transcription factor 2 (Phtf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C77923; 9530062N20Rik; 1110054G21Rik; AI447096	C77923; 9530062N20Rik; 1110054G21Rik; AI447096
Mus musculus	RefSeq	ILMN_221735	ILMN_221735	DND1	NM_173383.1	NM_173383.1		213236	27734199	NM_173383.1	Dnd1	NP_775559.1	ILMN_2739675	003940201	S	1615	CCAGGGTCTGACCTGCTATCCTTAGTCAATTCCCAGCTTGGCACCAGAGC	18	-	36923464-36923513	18qB2	Mus musculus dead end homolog 1 (zebrafish) (Dnd1), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC41452; RBMS4; Ter; BC034897	MGC41452; RBMS4; Ter; BC034897
Mus musculus	MEEBO	ILMN_193585	ILMN_193585	B930030B22RIK	scl0319538.2_177						B930030B22Rik		ILMN_2498549	007210553	S	10	CCCTTGGCGGCCTCCGCCTGGTTCAGGCAGAAGATCAGAGAGTTCTTAAT										
Mus musculus	Riken	ILMN_202645	ILMN_202645	PTDSS2	ri|C430041K09|PX00080G19|AK021249|1164					AK021249	Ptdss2		ILMN_1234845	002100433	S	879	GGGAGTTATAGAAGGGAACCACAGAGCATTGGGCCCGCAAGGACAAGGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 6659] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: CDP-diacylglycerol + L-serine = CMP + O-sn-phosphatidyl-L-serine [goid 3882] [evidence IMP]		
Mus musculus	RefSeq	ILMN_203108	ILMN_253331	TOMM40L	NM_001037170.2	NM_001037170.2		641376	141802384	NM_001037170.2	Tomm40l	NP_001032247.1	ILMN_1232024	006220678	S	1383	TTTCCAGTTAGGTAGCGGGTTGAGGTTCCCAATACTGCCATCAGCCCCAC	1	-	173149421-173149470	1qH3	Mus musculus translocase of outer mitochondrial membrane 40 homolog-like (yeast) (Tomm40l), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion [goid 8308] [evidence IEA]		
Mus musculus	RefSeq	ILMN_202076	ILMN_253331	TOMM40L	NM_001037170.2	NM_001037170.2		641376	141802384	NM_001037170.2	Tomm40l	NP_001032247.1	ILMN_1254075	001170682	S	1451	GTATGGCTCTGGAGTAAAGGAGAGGGACTACGGGATGTGTCTGGCTTCCC	1	-	173149353-173149402	1qH3	Mus musculus translocase of outer mitochondrial membrane 40 homolog-like (yeast) (Tomm40l), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion [goid 8308] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214606	ILMN_214606	SPINK8	NM_183136.2	NM_183136.2		78709	114145595	NM_183136.2	Spink8	NP_898959.2	ILMN_1220865	000540349	S	549	GTGCACTAGGGTGTACGAAGCCTTAGGGAGTGTTAAAAGAGAACAGCACC	9	+	109729011-109729060	9qF2	Mus musculus serine peptidase inhibitor, Kazal type 8 (Spink8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	C630041L24Rik	C630041L24Rik
Mus musculus	RefSeq	ILMN_215503	ILMN_215503	NARFL	NM_026238.3	NM_026238.3		67563	141802092	NM_026238.3	Narfl	NP_080514.2	ILMN_1232240	003370577	S	2459	GGAGGGCCCTTAATAAATGACCTTCTCTGGTGCCAGGGACATTCAGCTCA	17	+	25920205-25920254	17qA3.3	Mus musculus nuclear prelamin A recognition factor-like (Narfl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			9030612I22Rik; PRN; AI504405	9030612I22Rik; PRN; AI504405
Mus musculus	RefSeq	ILMN_217573	ILMN_217573	CCDC117	NM_134033.1	NM_134033.1		104479	30794237	NM_134033.1	Ccdc117	NP_598794.1	ILMN_2684952	001300554	S	3281	GATGAGAATCTGGTGTTTCTGTACTTTATTATTTTCAATAAAACTCAATG	11	-	5428899-5428948	11qA1	Mus musculus coiled-coil domain containing 117 (Ccdc117), mRNA.				BC018601; AU042822; AU018638; 1110004K02Rik; 1700026O03Rik; AV173073; MGC30640; RP23-288K19.5	BC018601; AU042822; AU018638; 1110004K02Rik; 1700026O03Rik; AV173073; MGC30640; RP23-288K19.5
Mus musculus	RefSeq	ILMN_217573	ILMN_217573	CCDC117	NM_134033.1	NM_134033.1		104479	30794237	NM_134033.1	Ccdc117	NP_598794.1	ILMN_1259355	004780446	S	3207	GCCGCCTTTGTTAACAGCAACAAGAATGCTGCAGTGCTACAACGTGCTGG	11	-	5428973-5429022	11qA1	Mus musculus coiled-coil domain containing 117 (Ccdc117), mRNA.				BC018601; AU042822; AU018638; 1110004K02Rik; 1700026O03Rik; AV173073; MGC30640; RP23-288K19.5	BC018601; AU042822; AU018638; 1110004K02Rik; 1700026O03Rik; AV173073; MGC30640; RP23-288K19.5
Mus musculus	RefSeq	ILMN_222851	ILMN_222851	CHODL	NM_139134.3	NM_139134.3		246048	142365147	NM_139134.3	Chodl	NP_624360.2	ILMN_1254082	003850301	S	2419	CTGATGGAGTTTCCTCAACACGTAGCACTTGTTCTTCTCAAGAGAGTTGT	16	+	78951862-78951911	16qC3.1	Mus musculus chondrolectin (Chodl), mRNA.	Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence ISS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MT75; PRED12; 3110074E07Rik	MT75; PRED12; 3110074E07Rik
Mus musculus	RefSeq	ILMN_192563	ILMN_258206	CAR6	NM_009802.1	NM_009802.1		12353	6753269	NM_009802.1	Car6	NP_033932.1	ILMN_1257323	006350292	S	1389	TTGATCTACGTTATAAATCAGCCTTTAGCATTTAGATGTAATAAAGTGAT	4	-	149561145-149561194	4qE2	Mus musculus carbonic anhydrase 6 (Car6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	DOC1	DOC1
Mus musculus	Riken	ILMN_204797	ILMN_204797	9030611K07RIK	ri|9030611K07|PX00025N21|AK033534|3578					AK033534	9030611K07Rik		ILMN_2567682	000160110	S	2964	TCTTTCCTGAGACAACCTCAGAGGGGGAAGCCCAGGTGTGTGGATGCCAC										
Mus musculus	RefSeq	ILMN_216493	ILMN_216493	CPT1B	NM_009948.1	NM_009948.1		12895	6753511	NM_009948.1	Cpt1b	NP_034078.1	ILMN_1227666	004010386	S	2701	GGGTCGGAGAATGTTCATAATGGGCTTCTTACCTGCTTTGAAATGGGTGC	15	-	89246914-89246963	15qE3	Mus musculus carnitine palmitoyltransferase 1b, muscle (Cpt1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence TAS]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of long-chain fatty acids into, out of, within or between cells. A long-chain fatty acid is an aliphatic compound with a terminal carboxyl group and with a chain length greater than C12 [goid 15909] [evidence TAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine [goid 4095] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	M-CPTI; Cpt1	M-CPTI; Cpt1
Mus musculus	RefSeq	ILMN_216493	ILMN_216493	CPT1B	NM_009948.1	NM_009948.1		12895	6753511	NM_009948.1	Cpt1b	NP_034078.1	ILMN_2709240	004540494	S	2488	CTGGGCAGATACTGCTCCTCTAGGGCCCCCGCTGGAGGTGGGATTGGAGC	15	-	89247127-89247176	15qE3	Mus musculus carnitine palmitoyltransferase 1b, muscle (Cpt1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence TAS]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of long-chain fatty acids into, out of, within or between cells. A long-chain fatty acid is an aliphatic compound with a terminal carboxyl group and with a chain length greater than C12 [goid 15909] [evidence TAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine [goid 4095] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	M-CPTI; Cpt1	M-CPTI; Cpt1
Mus musculus	Riken	ILMN_204959	ILMN_204959	MAP4K5	ri|D330042F17|PX00193G21|AK052373|1645					AK052373	Map4k5		ILMN_1231300	003610504	S	1154	CCTGTCCCCCAAAAGAAGATGGAGAACAGTAAAGGAAGACAGCCCTCTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184983	ILMN_231564	MUC5AC	NM_010844.1	NM_010844.1		17833	114431223	NM_010844.1	Muc5ac	NP_034974.1	ILMN_2423211	004040753	S	5781	CCACTGTTACTATGCGATGTGTAGCCAGGATTGTCAGGTGGTCAAGAGGG	7	+	148996976-148997025	7qF5	Mus musculus mucin 5, subtypes A and C, tracheobronchial/gastric (Muc5ac), mRNA.	Extracellular matrix material consisting of polysaccharides and protein [goid 43205] [evidence ISO]; Any constituent part of a cell, the basic structural and functional unit of all organisms [goid 44464] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGM; 2210005L13Rik	MGM; 2210005L13Rik
Mus musculus	RefSeq	ILMN_231564	ILMN_231564	MUC5AC	NM_010844.1	NM_010844.1		17833	114431223	NM_010844.1	Muc5ac	NP_034974.1	ILMN_2884000	006350717	S	8205	CCAGCAGTTGGCATTCAGGGTCAGCGAGGACATGCTTGGGCCTTTCCAGT	7	+	149004740-149004789	7qF5	Mus musculus mucin 5, subtypes A and C, tracheobronchial/gastric (Muc5ac), mRNA.	Extracellular matrix material consisting of polysaccharides and protein [goid 43205] [evidence ISO]; Any constituent part of a cell, the basic structural and functional unit of all organisms [goid 44464] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGM; 2210005L13Rik	MGM; 2210005L13Rik
Mus musculus	RefSeq	ILMN_211193	ILMN_211193	XKR5	NM_176951.3	NM_176951.3		319581	141801336	NM_176951.3	Xkr5	NP_795925.1	ILMN_1212997	002970181	S	2848	ATTGCACACCAAAGCCCCACGGGGAAAGGAACTTGGCCAGCTTAATCAGC	8	-	18932993-18933042	8qA1.3	Mus musculus X Kell blood group precursor-related family, member 5 (Xkr5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			XRG5; 5430438H03Rik	XRG5; 5430438H03Rik
Mus musculus	RefSeq	ILMN_221259	ILMN_221259	GPR82	NM_175669.3	NM_175669.3		319200	141802746	NM_175669.3	Gpr82	NP_783600.1	ILMN_1238020	007510161	S	1760	TGCAGTGTGAAGTCAATTTGGTATTATTTGGCTCATTTTACTGGGAAAGG	X	+	13243822-13243871	XqA1.1	Mus musculus G protein-coupled receptor 82 (Gpr82), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	Riken	ILMN_203413	ILMN_203413	A930031F24RIK	ri|A930031F24|PX00067L23|AK044672|1354					AK044672	A930031F24Rik		ILMN_2557115	003120435	S	993	TAGACAGGAAAGGCCAACAAGGCAGAACAAAGAGGCGGGCAGAGGCGGCA										
Mus musculus	RefSeq	ILMN_222733	ILMN_227589	RASA4	NM_001039103.2	NM_001039103.2		54153	116686092	NM_001039103.2	Rasa4	NP_001034192.1	ILMN_2753979	004670079	S	1054	CAGGACGGCTGATTCCTGTCATTGAGGAGACAACTAGTGCCGAGTGTCGC	5	+	136577118-136577167	5qG2	Mus musculus RAS p21 protein activator 4 (Rasa4), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AW112107; mKIAA0538; CAPRI; AA793972; GAPL; BB079060; KIAA0538	AW112107; mKIAA0538; CAPRI; AA793972; GAPL; BB079060; KIAA0538
Mus musculus	RefSeq	ILMN_220685	ILMN_227589	RASA4	NM_001039103.2	NM_001039103.2		54153	116686092	NM_001039103.2	Rasa4	NP_001034192.1	ILMN_2725305	001570315	S	1934	GGAGGAAAAGAGCTTCGGCAGCTCCCACATCATGCAGGTCATCTATGCAG	5	+	136580433-136580482	5qG2	Mus musculus RAS p21 protein activator 4 (Rasa4), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AW112107; mKIAA0538; CAPRI; AA793972; GAPL; BB079060; KIAA0538	AW112107; mKIAA0538; CAPRI; AA793972; GAPL; BB079060; KIAA0538
Mus musculus	RefSeq	ILMN_209765	ILMN_209765	KIRREL3	NM_026324.2	NM_026324.2		67703	133892291	NM_026324.2	Kirrel3	NP_080600.1	ILMN_2599008	006280474	S	3572	GCTGATGACCACAAGGAACAATGATCCATTCTCCAGTAGATAGGACTCTG	9	+	34843763-34843812	9qA4	Mus musculus kin of IRRE like 3 (Drosophila) (Kirrel3), mRNA. XM_922973 XM_922987 XM_922995 XM_923006 XM_923014	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1867; NEPH2; SST4; mKirre; 2900036G11Rik; 1500010O20Rik	mKIAA1867; NEPH2; SST4; mKirre; 2900036G11Rik; 1500010O20Rik
Mus musculus	RefSeq	ILMN_198002	ILMN_198002	LOC277274	XM_203722.3	XM_203722.3			38080200	XM_203722.3	LOC277274		ILMN_1258037	005550255	S	1000	AGTGGCATTGAAACCACCGACCCATCTCCGTTTCTGGTCATCTCAGAGGC										
Mus musculus	RefSeq	ILMN_192439	ILMN_192439	TPST1	NM_013837.1	NM_013837.1		22021	7305590	NM_013837.1	Tpst1	NP_038865.1	ILMN_1230765	002120463	S	1543	GGACACAGTTCTGTCACAGCTCCTCTTGTCCTTGTCTTTCCTTCCCAGGT	5	+	130611384-130611433	5qG1.3	Mus musculus protein-tyrosine sulfotransferase 1 (Tpst1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + protein tyrosine = adenosine 3',5'-bisphosphate + protein tyrosine-O-sulfate [goid 8476] [evidence IEA]	R75054	R75054
Mus musculus	Riken	ILMN_203634	ILMN_203634	APP	ri|4831404K18|PX00101P02|AK029172|3831					AK029172	App		ILMN_1252468	002900296	S	3503	ATGCTAGCCACCAGGTCTGGGAAGTGGCTCACAGTTGACAAAGTGGGAAC						A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; The area in the center of the spindle where the spindle microtubules from opposite poles overlap [goid 51233] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The growth of a synapse at a neuromuscular junction, the site of apposition of a motor end plate and the subneural cleft of the skeletal muscle fiber that it innervates [goid 51124] [evidence IGI]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; The process by which outgrowths develop from the axons of intact undamaged neurons [goid 48669] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings [goid 51563] [evidence IGI]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The recognition of molecules at the central nervous system midline choice point by an axon growth cone; this choice point determines whether the growth cone will cross the midline [goid 16199] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IDA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IGI]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IGI]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence IMP]; The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IGI]; Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50803] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor, followed by the movement of ions through a channel in the receptor complex [goid 35235] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IGI]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_219933	ILMN_219933	IL1F6	NM_019450.3	NM_019450.3		54448	133892651	NM_019450.3	Il1f6	NP_062323.1	ILMN_1251134	006960646	S	786	CAGATGCAGAACATCTTACCATGTTTTCATCCAAAGCATTTACTGTTGGT	2	+	24081124-24081173	2qA3	Mus musculus interleukin 1 family, member 6 (Il1f6), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Blocks the binding of interleukin-1 to the interleukin-1 receptor complex [goid 5152] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence ISS]	IL-1H1; Il1f9; MGC151481; MGC151479; IL1RP2; Fil1	IL-1H1; Il1f9; MGC151481; MGC151479; IL1RP2; Fil1
Mus musculus	MEEBO	ILMN_190924	ILMN_190924	9330187F13RIK	scl077515.1_116						9330187F13Rik		ILMN_2474477	005960370	S	6	TCCCACCATTTTAATACCATCAGAGATGGGGGGCTGCCCATGACATTCAC										
Mus musculus	RefSeq	ILMN_199280	ILMN_199280	LOC236365	XM_142906.2	XM_142906.2			38093822	XM_142906.2	LOC236365		ILMN_1240678	002940743	S	206	GTGCCATCATTCTTCAATACCATGAAAGAGCCCATACTGGAGAGAAACCC										
Mus musculus	RefSeq	ILMN_209548	ILMN_209548	GATA5	NM_008093.1	NM_008093.1		14464	7110596	NM_008093.1	Gata5	NP_032119.1	ILMN_2596855	003170491	S	2925	CACATCCGTAATTCATGTACCTTTGAGGTGGTTCAAGGCACTCACCAACC	2	-	180060114-180060163	2qH4	Mus musculus GATA binding protein 5 (Gata5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191928	ILMN_231500	ZCCHC7	NM_177027.3	NM_177027.3		319885	84452165	NM_177027.3	Zcchc7	NP_796001.1	ILMN_1251757	003120487	S	1528	GCAGCTAGAAAAAGCTTAGTGTACCTTTCATATAGGACAATTCAACTCTC	4	+	44921765-44921814	4qB1	Mus musculus zinc finger, CCHC domain containing 7 (Zcchc7), transcript variant 2, mRNA.				4930572I07Rik; RP23-159N16.2	4930572I07Rik; RP23-159N16.2
Mus musculus	RefSeq	ILMN_210117	ILMN_210117	2810410M20RIK	NM_024428.2	NM_024428.2		66310	34328328	NM_024428.2	2810410M20Rik	NP_077746.2	ILMN_2776521	000070750	S	362	TGGATCTACAGTCCTTGCCCACCCGTGCCTACCTGGACCAGACAGTTGTG	17	-	74212738-74212787	17qE2	Mus musculus RIKEN cDNA 2810410M20 gene (2810410M20Rik), mRNA.				DPY30; C87842	DPY30; C87842
Mus musculus	RefSeq	ILMN_209653	ILMN_209653	GALNT4	NM_015737.3	NM_015737.3		14426	84794638	NM_015737.3	Galnt4	NP_056552.1	ILMN_1242032	006960113	S	2397	TTAATATTTAGAACATAAAAGTCCAGACAAAATGGGGTATGATTCATTCT	10	+	98573168-98573217	10qC3	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (Galnt4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	AV011803	AV011803
Mus musculus	RefSeq	ILMN_208736	ILMN_208736	PLG	NM_008877.2	NM_008877.2		18815	31982112	NM_008877.2	Plg	NP_032903.2	ILMN_2933463	005670296	S	2334	CCAGGGCGACAGTGGAGGACCTCTGGTTTGCTTCGAGAAGGACAAGTACA	17	+	12611645-12611648:12611832-12611877	17qA1	Mus musculus plasminogen (Plg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence TAS]; The regrowth of lost or destroyed tissues [goid 42246] [evidence IMP]; An ongoing process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, resulting in the removal of small blood clots [goid 42730] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling [goid 48771] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Pg; AI649309	Pg; AI649309
Mus musculus	RefSeq	ILMN_208736	ILMN_208736	PLG	NM_008877.2	NM_008877.2		18815	31982112	NM_008877.2	Plg	NP_032903.2	ILMN_2593515	004260541	S	2536	AGCTTACTGAATATGGGGAGAGGGCTTAGGGTGTTTGGAAAAACTGACAG	17	+	12612030-12612079	17qA1	Mus musculus plasminogen (Plg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence TAS]; The regrowth of lost or destroyed tissues [goid 42246] [evidence IMP]; An ongoing process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, resulting in the removal of small blood clots [goid 42730] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling [goid 48771] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Pg; AI649309	Pg; AI649309
Mus musculus	RefSeq	ILMN_208736	ILMN_208736	PLG	NM_008877.2	NM_008877.2		18815	31982112	NM_008877.2	Plg	NP_032903.2	ILMN_2589024	002030047	S	1364	CTTGGTGCTACACCACTGACCCGAGCGTCAGGTGGGAATACTGCAACCTG	17	+	12595964-12596013	17qA1	Mus musculus plasminogen (Plg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence TAS]; The regrowth of lost or destroyed tissues [goid 42246] [evidence IMP]; An ongoing process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, resulting in the removal of small blood clots [goid 42730] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling [goid 48771] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Pg; AI649309	Pg; AI649309
Mus musculus	RefSeq	ILMN_199554	ILMN_245653	MTR	XM_976165.1	XM_976165.1		238505	94394674	XM_976165.1	Mtr	XP_981259.1	ILMN_1259739	001240372	S	4241	CAAGGCTCATGGTGTTCCTGGGCCCTCATGATTGGGGCAAGCGGAAGACA				13qA1	PREDICTED: Mus musculus 5-methyltetrahydrofolate-homocysteine methyltransferase, transcript variant 2 (Mtr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IMP]	Interacting selectively with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 31419] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine [goid 8898] [evidence IEA]; Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = diphosphate + dihydropteroate [goid 4156] [evidence IEA]; Catalysis of the reaction: 5-methyltetrahydrofolate + L-homocysteine = tetrahydrofolate + L-methionine [goid 8705] [evidence IMP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219827	ILMN_219827	OLFR561	NM_147092.1	NM_147092.1		259096	22128784	NM_147092.1	Olfr561	NP_667303.1	ILMN_2714080	007160491	S	849	GCTCATTCCTCCGGTAATGAATCCCATAATCTATAGTGTGAAAACCAAAC	7	+	109923888-109923937	7qE3	Mus musculus olfactory receptor 561 (Olfr561), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR14-2	MOR14-2
Mus musculus	RefSeq	ILMN_213860	ILMN_213860	DIAP1	NM_007858.2	NM_007858.2		13367	118131108	NM_007858.2	Diap1	NP_031884.1	ILMN_2641541	003940021	S	4314	CTCTGCTTTTCCTCCTGGCAATTATTTATTACTAGTGCTGTGGCATTGGG	18	-	38004492-38004541	18qB3	Mus musculus diaphanous homolog 1 (Drosophila) (Diap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	D18Wsu154e; Dia1; KIAA4062; Drf1; p140mDia; mKIAA4062	D18Wsu154e; Dia1; KIAA4062; Drf1; p140mDia; mKIAA4062
Mus musculus	RefSeq	ILMN_213860	ILMN_213860	DIAP1	NM_007858.2	NM_007858.2		13367	118131108	NM_007858.2	Diap1	NP_031884.1	ILMN_2668425	006520037	S	1762	TCTGCTGTGGTTGTTGCACCTTCTGTTTCTAGCAGTGCTGCTGTTCCCCC	18	-	38050719-38050768	18qB3	Mus musculus diaphanous homolog 1 (Drosophila) (Diap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	D18Wsu154e; Dia1; KIAA4062; Drf1; p140mDia; mKIAA4062	D18Wsu154e; Dia1; KIAA4062; Drf1; p140mDia; mKIAA4062
Mus musculus	RefSeq	ILMN_213860	ILMN_213860	DIAP1	NM_007858.2	NM_007858.2		13367	118131108	NM_007858.2	Diap1	NP_031884.1	ILMN_2972459	007000390	S	4242	TGTGGTTTCTCTGGCCCTGAGAATAGCATGGGACTTGTGAACCTTTGGGC	18	-	38004564-38004613	18qB3	Mus musculus diaphanous homolog 1 (Drosophila) (Diap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	D18Wsu154e; Dia1; KIAA4062; Drf1; p140mDia; mKIAA4062	D18Wsu154e; Dia1; KIAA4062; Drf1; p140mDia; mKIAA4062
Mus musculus	RefSeq	ILMN_213212	ILMN_213212	RBMS3	NM_178660.2	NM_178660.2		207181	31340984	NM_178660.2	Rbms3	NP_848775.1	ILMN_2634777	000070497	S	2530	GAGCGTGGTTGCTAGCGAAAGCGTCAGTGCTTTTTATCTGCAGTTTTTTC	9	-	116486821-116486870	9qF3	Mus musculus RNA binding motif, single stranded interacting protein (Rbms3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	6720477E09Rik; MGC118437	6720477E09Rik; MGC118437
Mus musculus	Riken	ILMN_202535	ILMN_202535	2500001D14RIK	ri|2500001D14|ZX00082C08|AK010841|817					AK010841	2500001D14Rik		ILMN_1234466	001090634	S	467	AAATGACTGCTTCTGGGGAAGGTGATGTGAGCCGTGCTCGGGCTGTGTGC										
Mus musculus	RefSeq	ILMN_185059	ILMN_185059	WNT6	NM_009526.3	NM_009526.3		22420	119672921	NM_009526.3	Wnt6	NP_033552.2	ILMN_2491759	003440064	S	1491	CCAGGAACTTGGGGTTTACACCAGCCCACGAAAGCCCGGGGGAACATTCC	1	+	74831316-74831365	1qC3	Mus musculus wingless-related MMTV integration site 6 (Wnt6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AA409270; Wnt-6	AA409270; Wnt-6
Mus musculus	RefSeq	ILMN_185059	ILMN_185059	WNT6	NM_009526.3	NM_009526.3		22420	119672921	NM_009526.3	Wnt6	NP_033552.2	ILMN_2901765	006940025	S	1566	GCAGGAGATCACTCCCCTTGGCCCCCCAGATGGAAATAAAAAAGCCAGAC	1	+	74831391-74831440	1qC3	Mus musculus wingless-related MMTV integration site 6 (Wnt6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AA409270; Wnt-6	AA409270; Wnt-6
Mus musculus	RefSeq	ILMN_198690	ILMN_198690	LOC215098	XM_145665.1	XM_145665.1			20834093	XM_145665.1	LOC215098		ILMN_2532581	004590603	S	205	CGAGGTCGGATCCTGTCTGGAGTCGATGTACAGATTGGAGACATTGTCAC										
Mus musculus	RefSeq	ILMN_185280	ILMN_185280	TNC	NM_011607.2	NM_011607.2		21923	126722833	NM_011607.2	Tnc	NP_035737.2	ILMN_2463181	000270324	S	6313	CCACACGGATCACTGAGGCACTGATGTAGGCCCCTCTGCAACGACTTCCT	4	-	63621290-63621339	4qC1	Mus musculus tenascin C (Tnc), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence ISO]	TN; AI528729; tenascin-C; TN-C; Hxb; Ten; MGC144208; MGC144209; C130033P17Rik	TN; AI528729; tenascin-C; TN-C; Hxb; Ten; MGC144208; MGC144209; C130033P17Rik
Mus musculus	RefSeq	ILMN_185280	ILMN_185280	TNC	NM_011607.2	NM_011607.2		21923	126722833	NM_011607.2	Tnc	NP_035737.2	ILMN_1251943	006330332	S	3980	ACTTTGTCGTTCAGGTGCAGGAGGCCAACAATGTGGAGGCCGCTCAGAAC	4	-	63656704-63656753	4qC1	Mus musculus tenascin C (Tnc), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence ISO]	TN; AI528729; tenascin-C; TN-C; Hxb; Ten; MGC144208; MGC144209; C130033P17Rik	TN; AI528729; tenascin-C; TN-C; Hxb; Ten; MGC144208; MGC144209; C130033P17Rik
Mus musculus	RefSeq	ILMN_185280	ILMN_185280	TNC	NM_011607.2	NM_011607.2		21923	126722833	NM_011607.2	Tnc	NP_035737.2	ILMN_2485085	005420605	S	4639	GAAATTGAACTCTATGGAATAAGCCGCGGAAGGCGATCCCAGCCAGTCAG	4	-	63643701-63643750	4qC1	Mus musculus tenascin C (Tnc), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence ISO]	TN; AI528729; tenascin-C; TN-C; Hxb; Ten; MGC144208; MGC144209; C130033P17Rik	TN; AI528729; tenascin-C; TN-C; Hxb; Ten; MGC144208; MGC144209; C130033P17Rik
Mus musculus	RefSeq	ILMN_185280	ILMN_185280	TNC	NM_011607.2	NM_011607.2		21923	126722833	NM_011607.2	Tnc	NP_035737.2	ILMN_2454497	003140228	S	3441	CATTCAGGTACAGGAAGCCAACAATGTGGAGACTGCTCACAACTTCACAG	4	-	63661854-63661903	4qC1	Mus musculus tenascin C (Tnc), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence ISO]	TN; AI528729; tenascin-C; TN-C; Hxb; Ten; MGC144208; MGC144209; C130033P17Rik	TN; AI528729; tenascin-C; TN-C; Hxb; Ten; MGC144208; MGC144209; C130033P17Rik
Mus musculus	RefSeq	ILMN_185280	ILMN_185280	TNC	NM_011607.2	NM_011607.2		21923	126722833	NM_011607.2	Tnc	NP_035737.2	ILMN_1236724	004050598	S	3834	AGGGGTCACCCAGGACTTCGGCACGGCCCCTCTCTCTGTTGAGGTCTTGA	4	-	63660949-63660998	4qC1	Mus musculus tenascin C (Tnc), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence ISO]	TN; AI528729; tenascin-C; TN-C; Hxb; Ten; MGC144208; MGC144209; C130033P17Rik	TN; AI528729; tenascin-C; TN-C; Hxb; Ten; MGC144208; MGC144209; C130033P17Rik
Mus musculus	RefSeq	ILMN_199691	ILMN_325915	LOC620283	XR_031410.1	XR_031410.1		620283	149250571	XR_031410.1	LOC620283		ILMN_1227450	001990102	S	1010	GGGAGACTTTCATTGGAGACAGGTGACATGGGAAGCAGCCAGAATAGAGC				3qA1	PREDICTED: Mus musculus similar to mCBP (LOC620283), misc RNA.					
Mus musculus	RefSeq	ILMN_217020	ILMN_217020	CIITA	NM_007575.2	NM_007575.2		12265	118131183	NM_007575.2	Ciita	NP_031601.1	ILMN_2678211	002630463	S	5076	GAAAGGCAGATCTGTATCGCTCGCTGCCTTTGGTCTGTCTGGAAATGCCA	16	+	10527580-10527629	16qA1	Mus musculus class II transactivator (Ciita), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]	MGC130299; C2ta; CIITA	MGC130299; C2ta; CIITA
Mus musculus	RefSeq	ILMN_234321	ILMN_234321	1700012L04RIK	NM_029588.1	NM_029588.1		76383	13386419	NM_029588.1	1700012L04Rik	NP_083864.1	ILMN_2804407	001440187	S	273	TCGAACTGGCTGGTGAGGTGGCCCACACCACTGGCAGGAAGCGCGTAACT	X	+	8440993-8441042	XqA1.1	Mus musculus RIKEN cDNA 1700012L04 gene (1700012L04Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2al1	H2al1
Mus musculus	RefSeq	ILMN_193974	ILMN_193974	TNNI3K	NM_177066.4	NM_177066.4		435766	142364382	NM_177066.4	Tnni3k	NP_796040.2	ILMN_1254265	004900646	S	365	GTTAAAAGGGCTCCGTCCATCCAGACTGACAAGAAATGGGTTTCCAGCTC	3	-	154700371-154700420	3qH4	Mus musculus TNNI3 interacting kinase (Tnni3k), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D830019J24Rik; Cark	D830019J24Rik; Cark
Mus musculus	RefSeq	ILMN_200669	ILMN_200669	LOC381808	XM_355809.1	XM_355809.1			38085036	XM_355809.1	LOC381808		ILMN_2539579	000620470	S	396	CCACAAACACAGAGAAATGCGTGGGCTGACATCTGCTGGCCGAAAGAGCG										
Mus musculus	RefSeq	ILMN_223711	ILMN_223711	PCDHB3	NM_053128.2	NM_053128.2		93874	113866016	NM_053128.2	Pcdhb3	NP_444358.2	ILMN_1253649	002190446	S	3045	GTGCACAGAAGTTGTGCCCTGTTCTGTTGTGAGCACCATGTATACAAAAG	18	+	37463497-37463546	18qB3	Mus musculus protocadherin beta 3 (Pcdhb3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbC	PcdhbC
Mus musculus	RefSeq	ILMN_220565	ILMN_220565	POLH	NM_030715.3	NM_030715.3		80905	142378119	NM_030715.3	Polh	NP_109640.1	ILMN_1253779	006510554	S	2438	GGGACTCTGATCCTGTTGCTGATCAATGCTTTTCCTCTCTAGGGAGACAG	17	-	46318473-46318480:46318748-46318789	17qC	Mus musculus polymerase (DNA directed), eta (RAD 30 related) (Polh), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Pathways for DNA repair which occur after DNA has replicated, e.g. mismatch repair, and which involve translesion synthesis (TLS-type) DNA polymerases [goid 6301] [evidence IDA]; The repair of UV-induced T-T, C-T and C-C dimers [goid 6290] [evidence IDA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RAD30A; XPV	RAD30A; XPV
Mus musculus	RefSeq	ILMN_212210	ILMN_212210	NUP43	NM_145706.1	NM_145706.1		69912	21844544	NM_145706.1	Nup43	NP_663752.1	ILMN_1250574	004730292	S	1003	GGCCGGTGTTCACCAGTCTCTAGTAAGTTCCTGGCTCAGCACAGACCCTG	10	+	7398409-7398458	10qA1	Mus musculus nucleoporin 43 (Nup43), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		AA409950; p42; 43kDa; 2610529I12Rik; 2610016K01Rik	AA409950; p42; 43kDa; 2610529I12Rik; 2610016K01Rik
Mus musculus	RefSeq	ILMN_187972	ILMN_226159	TM7SF2	NM_028454.2	NM_028454.2		73166	117414163	NM_028454.2	Tm7sf2	NP_082730.2	ILMN_1241333	006560373	S	1039	CTTCCGAGGGGCCAACTCCCAGAAAAACACATTCAGGAAGAATCCTTCTG	19	-	6063541-6063590	19qA	Mus musculus transmembrane 7 superfamily member 2 (Tm7sf2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADP+ + 4,4-dimethyl-5-alpha-cholesta-8,24-dien-3-beta-ol = NADPH + H+ + 4,4-dimethyl-5-alpha-cholesta-8,14,24-trien-3-beta-ol [goid 50613] [evidence IEA]	ANG1; 3110041O18Rik	ANG1; 3110041O18Rik
Mus musculus	RefSeq	ILMN_197157	ILMN_197157	LOC380839	XM_354746.1	XM_354746.1			38074349	XM_354746.1	LOC380839		ILMN_1238314	005560195	S	597	CCAGTGGGTCAAAGGTCAAACAGAAGACCTGAAGTGCAAGGTGCTGGAGA										
Mus musculus	RefSeq	ILMN_188026	ILMN_316519	LOC620297	XM_001478422.1	XM_001478422.1		620297	149265585	XM_001478422.1	LOC620297	XP_001478472.1	ILMN_1250407	007050437	S	107	AGTCCCTGATAATAAATTGCACGTATTCAGCCACAAGCATAGGTTACCCT	14	+	53752575-53752624	14qC2	PREDICTED: Mus musculus similar to TRAV6D-6 (LOC620297), mRNA.					
Mus musculus	Riken	ILMN_203985	ILMN_203985	A530085O15RIK	ri|A530085O15|PX00143C05|AK041150|2151					AK041150	A530085O15Rik		ILMN_1218445	002030594	S	1847	GTGGTGGGCATCATCAGCACCTACGTCTACTCGGCCCTCTAACTTTTCCC										
Mus musculus	RefSeq	ILMN_217269	ILMN_256434	OLFR614	NM_147100.2	NM_147100.2		259104	84370267	NM_147100.2	Olfr614	NP_667311.2	ILMN_2681275	000620259	S	2086	TGGGAACTGTGATGAAACTGGGGATCCAAGATCGAAACTGGAAATCCCTG	7	+	110700967-110701016	7qE3	Mus musculus olfactory receptor 614 (Olfr614), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR20-1	MOR20-1
Mus musculus	RefSeq	ILMN_210547	ILMN_210547	INSIG1	NM_153526.4	NM_153526.4		231070	146149175	NM_153526.4	Insig1	NP_705746.1	ILMN_2606693	005310343	S	686	GATCACTCAGTTTCTTGTGTATAATGGTGTCTACCAGTACACGTCCCCTG				5qB1	Mus musculus insulin induced gene 1 (Insig1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating deprivation of sterols. Sterols are a group of steroids characterized by the presence of one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 6991] [evidence IDA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1810013C12Rik; Insig-1	1810013C12Rik; Insig-1
Mus musculus	RefSeq	ILMN_210547	ILMN_210547	INSIG1	NM_153526.4	NM_153526.4		231070	146149175	NM_153526.4	Insig1	NP_705746.1	ILMN_2620965	004040240	S	2459	GTTAGAAATAATGTAGCCAAAAAAGGTGAATCTGAAGGATGCTTTTGCCA				5qB1	Mus musculus insulin induced gene 1 (Insig1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating deprivation of sterols. Sterols are a group of steroids characterized by the presence of one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 6991] [evidence IDA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1810013C12Rik; Insig-1	1810013C12Rik; Insig-1
Mus musculus	RefSeq	ILMN_210547	ILMN_210547	INSIG1	NM_153526.4	NM_153526.4		231070	146149175	NM_153526.4	Insig1	NP_705746.1	ILMN_1245272	004920369	S	651	GGGCTTGGGATTACCATCGCCTTCCTAGCTACGCTGATCACTCAGTTTCT				5qB1	Mus musculus insulin induced gene 1 (Insig1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating deprivation of sterols. Sterols are a group of steroids characterized by the presence of one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 6991] [evidence IDA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1810013C12Rik; Insig-1	1810013C12Rik; Insig-1
Mus musculus	RefSeq	ILMN_221264	ILMN_221264	FEZF1	XM_133029.5	XM_133029.5		73191	94377086	XM_133029.5	Fezf1	XP_133029.1	ILMN_2733155	000510706	S	2116	TATTTCCATTGTGTCGTTTCTGCCGTCTCAAAATGCCTGCTGATCGTTTA	6	-	23195287-23195336	6qA3.1	PREDICTED: Mus musculus Fez family zinc finger 1 (Fezf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212036	ILMN_212036	STX5A	NM_019829.3	NM_019829.3		56389	34328464	NM_019829.3	Stx5a	NP_062803.3	ILMN_2821092	005900376	S	2047	ACATGCTGCAGCCTATTTCCTCCCAATTACAGCAAGACTGTCAGCCTCAA	19	+	8830084-8830132	19qA	Mus musculus syntaxin 5A (Stx5a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	0610031F24Rik; D19Ertd627e; Stx5	0610031F24Rik; D19Ertd627e; Stx5
Mus musculus	RefSeq	ILMN_212036	ILMN_212036	STX5A	NM_019829.3	NM_019829.3		56389	34328464	NM_019829.3	Stx5a	NP_062803.3	ILMN_1255725	004220349	S	1519	TGAACCCTCCTCCCTCATTCTGAGCCACTCCATGGAGGGCTTGGGATCCT	19	+	8829556-8829558:8829559-8829605	19qA	Mus musculus syntaxin 5A (Stx5a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	0610031F24Rik; D19Ertd627e; Stx5	0610031F24Rik; D19Ertd627e; Stx5
Mus musculus	RefSeq	ILMN_210757	ILMN_210757	SKIV2L2	NM_028151.2	NM_028151.2		72198	118130428	NM_028151.2	Skiv2l2	NP_082427.1	ILMN_1218617	004640670	S	3171	CTGATTGCAACTGACTACAAACGCTTCCCAGTGTTCAGTGGTTCACAAGC	13	-	113658076-113658125	13qD2.2	Mus musculus superkiller viralicidic activity 2-like 2 (S. cerevisiae) (Skiv2l2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	2610528A15Rik; mKIAA0052	2610528A15Rik; mKIAA0052
Mus musculus	Riken	ILMN_201655	ILMN_201655	1110068E08RIK	ri|1110068E08|R000019E18|AK004405|1045					AK004405	1110068E08Rik		ILMN_2543514	001260500	S	800	ATGAAGATGGTAGCCGCCTGTCAGGACCGTGAGGAACATGGGGTTCTTCG										
Mus musculus	RefSeq	ILMN_198300	ILMN_239588	LOC330264	XR_003405.1	XR_003405.1		330264	94378421	XR_003405.1	LOC330264		ILMN_1248086	004280253	S	711	GAGCTGTCAGATGGGCAGATGATCACCAGGGGCAATGAGCAGTTCAAGTG				6qA1	PREDICTED: Mus musculus similar to Actin, cytoplasmic 2 (Gamma-actin) (LOC330264), mRNA.					
Mus musculus	RefSeq	ILMN_230495	ILMN_230495	KLRA19	NM_053154.1	NM_053154.1		93971	21361221	NM_053154.1	Klra19	NP_444384.1	ILMN_2981486	006580280	S	185	TACTGAAGGGCCCAGAGAAGCTGGCTACAGAAAGTGTTCAGGAAGCTGGC					Mus musculus killer cell lectin-like receptor, subfamily A, member 19 (Klra19), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ly49s	Ly49s
Mus musculus	MEEBO	ILMN_224072	ILMN_224072	OLFR311	scl0258530.1_142				33239063	NM_146537	Olfr311		ILMN_2774224	000630520	S	288	AGCACAGCTCTACATGTTTATCACACTGTGTGGTACTGAATGCTTTCTGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	MEEBO	ILMN_209110	ILMN_209110	9330182O14RIK	scl47951.4.1_115				51769124	XM_488741	9330182O14Rik		ILMN_2592638	007210402	S	1587	TCCATCAATCTAAGAATGTATCCTTCCTCTTTCTGTATTCTACCAACTCC										
Mus musculus	RefSeq	ILMN_209293	ILMN_209293	PEX5	NM_175933.2	NM_175933.2		19305	113930729	NM_175933.2	Pex5	NP_787947.1	ILMN_1258867	005390646	S	2758	AACCTTTATAGGGGATATCATTGAAAACCCCCTTCCCCTCGATTACCTCC	6	-	124347100-124347149	6qF2	Mus musculus peroxisome biogenesis factor 5 (Pex5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IMP]; The process of directing proteins towards the peroxisome using signals contained within the protein [goid 6625] [evidence TAS]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IMP]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex [goid 21895] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]	Interacting selectively with a peroxisomal targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome [goid 268] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	X83306; Pxr1; PTS1R; AW212715; ESTM1	X83306; Pxr1; PTS1R; AW212715; ESTM1
Mus musculus	RefSeq	ILMN_209293	ILMN_209293	PEX5	NM_175933.2	NM_175933.2		19305	113930729	NM_175933.2	Pex5	NP_787947.1	ILMN_3108328	007000348	A	2701	CATTCTTGCCAAATTCCCAACCAAGGGAGGGTTCAGTGTTACCATAAGCC	6	-	124347157-124347206	6qF2	Mus musculus peroxisome biogenesis factor 5 (Pex5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IMP]; The process of directing proteins towards the peroxisome using signals contained within the protein [goid 6625] [evidence TAS]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IMP]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex [goid 21895] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]	Interacting selectively with a peroxisomal targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome [goid 268] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	X83306; Pxr1; PTS1R; AW212715; ESTM1	X83306; Pxr1; PTS1R; AW212715; ESTM1
Mus musculus	RefSeq	ILMN_185737	ILMN_245336	EG328451	NR_002862.2	NR_002862.2		328451	142382744	NR_002862.2	EG328451		ILMN_2429582	002750592	S	2571	CATGTAAAATTAGCCTTTATCATTATACTATTCATTGGAAAAACAGACTT	14	+	90299155-90299204	14qE2.1	Mus musculus predicted gene, EG328451 (EG328451), non-coding RNA.				Pabpc4l	Pabpc4l
Mus musculus	RefSeq	ILMN_189491	ILMN_256682	DNM1L	NM_001025947.1	NM_001025947.1		74006	71061454	NM_001025947.1	Dnm1l	NP_001021118.1	ILMN_1220522	006280608	S	3748	TTAAGAAAGATGACCACCACTGTAGCCTTTTTGAATTTGTAAGGACAAAG	16	-	16312547-16312596	16qA2	Mus musculus dynamin 1-like (Dnm1l), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	MGC90593; Drp1; 6330417M19Rik; AI450666	MGC90593; Drp1; 6330417M19Rik; AI450666
Mus musculus	RefSeq	ILMN_256682	ILMN_256682	DNM1L	NM_001025947.1	NM_001025947.1		74006	71061454	NM_001025947.1	Dnm1l	NP_001021118.1	ILMN_3111421	002470524	A	3363	CGTGGGTGGAGGATCTCTGAGTTCAAGGCCACCGTGGTTCCAGACAACTA	16	-	16312932-16312981	16qA2	Mus musculus dynamin 1-like (Dnm1l), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	MGC90593; Drp1; 6330417M19Rik; AI450666	MGC90593; Drp1; 6330417M19Rik; AI450666
Mus musculus	RefSeq	ILMN_194946	ILMN_256682	DNM1L	NM_001025947.1	NM_001025947.1		74006	71061454	NM_001025947.1	Dnm1l	NP_001021118.1	ILMN_2511121	000730184	S	2810	GCTCCTGAGTCTACACTGCCCTGGTGCATTAGAAATTAAAAATACTTTGA	16	-	16313485-16313534	16qA2	Mus musculus dynamin 1-like (Dnm1l), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	MGC90593; Drp1; 6330417M19Rik; AI450666	MGC90593; Drp1; 6330417M19Rik; AI450666
Mus musculus	RefSeq	ILMN_213429	ILMN_213429	BAD	NM_007522.2	NM_007522.2		12015	133892666	NM_007522.2	Bad	NP_031548.1	ILMN_1216802	003170068	S	1181	TCGCTGTGTCCCTTTAACAGGGAGAAGAGCTGACGTACAGCTTGAGTCCC	19	+	7026112-7026161	19qA	Mus musculus BCL2-associated agonist of cell death (Bad), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of glucose, the aldohexose gluco-hexose [goid 6007] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bbc2; AI325008	Bbc2; AI325008
Mus musculus	Riken	ILMN_202279	ILMN_202279	1700111D19RIK	ri|1700111D19|ZX00077F22|AK007168|731					AK007168	1700111D19Rik		ILMN_1231377	006760279	S	412	CCACTTTCCCCAGAGAGAGGCAGGAGTCACAGCAGATGCGAGGCCATGAA										
Mus musculus	RefSeq	ILMN_214851	ILMN_214851	AF529169	NM_153509.2	NM_153509.2		209743	118130174	NM_153509.2	AF529169	NP_705729.1	ILMN_2652679	004670202	S	4179	AAAGGTACCAAGGTCTTTTCAATTACAACATTTACTCCAGTTTTAAATAT	9	-	89484888-89484937	9qE3.1	Mus musculus cDNA sequence AF529169 (AF529169), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			DD1	DD1
Mus musculus	RefSeq	ILMN_198162	ILMN_198162	LOC240094	XM_139934.2	XM_139934.2			38082317	XM_139934.2	LOC240094		ILMN_1255995	003940762	S	405	CGTTGGTGGAGCGTGTAAACCACCTGGCGACATGTCCGCTGTGCGGGGGC										
Mus musculus	RefSeq	ILMN_197935	ILMN_197935	LOC381041	XM_354956.1	XM_354956.1			38079734	XM_354956.1	LOC381041		ILMN_2529887	004810059	S	298	TACTTCTGATGAGGGCCGAAAGACTAAGTGAACACAAAACATCCCATTAA										
Mus musculus	MEEBO	ILMN_212732	ILMN_212732	E430002D04RIK	scl31916.12.1_47	NM_172909.1			27370393	NM_172909.1	E430002D04Rik		ILMN_2629663	003780224	S	3326	GTCCTGACACTTGATGCCTTTGCTGACCTTAGGGGTCACAAGACTATCCT										
Mus musculus	MEEBO	ILMN_190807	ILMN_190807	1110064P04RIK	scl40444.9_437				31982557	NM_172391	1110064P04Rik		ILMN_2473450	004050286	S	6	GTCTCAGTAAGGAACTCCCTGCTTAGCTTGGTTTGGCTGCTGTTAGCCAA										
Mus musculus	Riken	ILMN_203217	ILMN_203217	B430010L15RIK	ri|B430010L15|PX00070D23|AK046559|3608					AK046559	B430010L15Rik		ILMN_1252361	000840152	S	3324	GAGACACCAGAAAGCAACAAATGAGGAGACGGAAAGTGGCATTTGCTTGG										
Mus musculus	RefSeq	ILMN_222041	ILMN_222041	BTBD10	NM_133700.2	NM_133700.2		68815	118130947	NM_133700.2	Btbd10	NP_598461.1	ILMN_1236572	005290050	S	2075	AGCTGGGGTACTTTAAGTGTAGATTGATATTTATCTTGCCTCAGGTAAGA	7	-	120459596-120459645	7qF1	Mus musculus BTB (POZ) domain containing 10 (Btbd10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Gmrp1; 1110056N09Rik	Gmrp1; 1110056N09Rik
Mus musculus	RefSeq	ILMN_211898	ILMN_211898	GPR37L1	NM_134438.1	NM_134438.1		171469	30794241	NM_134438.1	Gpr37l1	NP_602320.1	ILMN_2620545	003130685	S	1537	CTACAAACAATGCTGTTCTTATCCTCCGAGGGGCCTGCCAGATCTCCACC	1	-	137057236-137057285	1qE4	Mus musculus G protein-coupled receptor 37-like 1 (Gpr37l1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	D0Kist8; CAG-18; AW047233	D0Kist8; CAG-18; AW047233
Mus musculus	MEEBO	ILMN_223944	ILMN_223944	6430550H21RIK	scl0245386.1_3				40254260	NM_172930	6430550H21Rik		ILMN_2771951	000780066	S	3255	GCTTAAAATTTGTATCACTGCCACGTTGGAAACCCAGACAGCTTTTGTGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_195402	ILMN_258646	SLC27A2	NM_011978.2	NM_011978.2		26458	113374153	NM_011978.2	Slc27a2	NP_036108.2	ILMN_2515273	003180468	S	1981	CTCTGAAGCTCTGAATATTCCCTGGTGGTTTAGCTCATGACATTTCCAGA	2	+	126413659-126413672:126413673-126413708	2qF1	Mus musculus solute carrier family 27 (fatty acid transporter), member 2 (Slc27a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence TAS]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence TAS]	Vlacs; FATP2; Vlac; VLCS; ACSVL1	Vlacs; FATP2; Vlac; VLCS; ACSVL1
Mus musculus	RefSeq	ILMN_195402	ILMN_258646	SLC27A2	NM_011978.2	NM_011978.2		26458	113374153	NM_011978.2	Slc27a2	NP_036108.2	ILMN_2648445	006450309	S	1791	GCGAGGCCTCGGTTCCTGAGGATACAAGATACCATTGAGATCACTGGGAC	2	+	126412092-126412118:126413496-126413518	2qF1	Mus musculus solute carrier family 27 (fatty acid transporter), member 2 (Slc27a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence TAS]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence TAS]	Vlacs; FATP2; Vlac; VLCS; ACSVL1	Vlacs; FATP2; Vlac; VLCS; ACSVL1
Mus musculus	RefSeq	ILMN_194624	ILMN_194624	WNT3	NM_009521.1	NM_009521.1		22415	6678592	NM_009521.1	Wnt3	NP_033547.1	ILMN_2508080	004540577	S	18	GTGGGGCTGCACGGATCAATCCATCAACTCCGTCTTAAGGAGAATCAGAA	11	+	103635555-103635582:103635583-103635604	11qE1	Mus musculus wingless-related MMTV integration site 3 (Wnt3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; Formation of the specialized region at the anterior end of the primitive streak of the embryo that acts as the main signaling center establishing the body plan [goid 60064] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	Int-4; Wnt-3	Int-4; Wnt-3
Mus musculus	MEEBO	ILMN_193511	ILMN_193511	V1RC4	scl00113861.1_81	NM_053234.1			16716550	NM_053234.1	V1rc4		ILMN_2497870	000780113	S	20	TCATCATCCAGAGATGCGTTTCTTGTAGGAGTCATGCTGAACACAACTGC							The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]		
Mus musculus	RefSeq	ILMN_184719	ILMN_259693	TMEM44	NM_172614.3	NM_172614.3		224090	100817929	NM_172614.3	Tmem44	NP_766202.3	ILMN_2661495	004480338	S	351	CTGGGGCCTACCTAGCAGCTGTCGATTTCATGAACTTCATGTTCACTCTC	16	-	30545248-30545297	16qB2	Mus musculus transmembrane protein 44 (Tmem44), mRNA.				B230220N21; 9330161C17Rik; 1700007N03Rik	B230220N21; 9330161C17Rik; 1700007N03Rik
Mus musculus	RefSeq	ILMN_206390	ILMN_259693	TMEM44	NM_172614.3	NM_172614.3		224090	100817929	NM_172614.3	Tmem44	NP_766202.3	ILMN_1215524	003990228	S	2041	GTGACCACGAGTGAGGGAATGAGTAAAGGGAATGAGGCCAGGCAGGAGCG	16	-	30514091-30514140	16qB2	Mus musculus transmembrane protein 44 (Tmem44), mRNA.				B230220N21; 9330161C17Rik; 1700007N03Rik	B230220N21; 9330161C17Rik; 1700007N03Rik
Mus musculus	RefSeq	ILMN_260117	ILMN_260117	MIA1	NM_019394.1	NM_019394.1		12587	9506478	NM_019394.1	Mia1	NP_062267.1	ILMN_2880657	002480139	S	408	GCTATTTCCCCAGTAGCATTGTCCGGGAGGACCTGAACTCGAAACCTGGC	7	-	26888947-26888996	7qA3	Mus musculus melanoma inhibitory activity 1 (Mia1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Cdrap; CD-RAP; MIA	Cdrap; CD-RAP; MIA
Mus musculus	RefSeq	ILMN_191571	ILMN_236039	MBNL3	NM_134163.4	NM_134163.4		171170	71043949	NM_134163.4	Mbnl3	NP_598924.1	ILMN_2480239	007200164	S	1976	CCCTACATGTGATAGGAAAGTTCAAATGTTAACCTCAAACCATTCCTCTT	X	-	48473316-48473365	XqA5	Mus musculus muscleblind-like 3 (Drosophila) (Mbnl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MBLX39; E430034C16Rik; MBLX; A530038J18Rik; CHCR; MBXL	MBLX39; E430034C16Rik; MBLX; A530038J18Rik; CHCR; MBXL
Mus musculus	RefSeq	ILMN_194805	ILMN_236039	MBNL3	NM_134163.4	NM_134163.4		171170	71043949	NM_134163.4	Mbnl3	NP_598924.1	ILMN_2616897	000450653	S	1402	ATACAACCATACAGGTTTGTCATGTATATGAATTATCAGATCCATATTAC	X	-	48473890-48473939	XqA5	Mus musculus muscleblind-like 3 (Drosophila) (Mbnl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MBLX39; E430034C16Rik; MBLX; A530038J18Rik; CHCR; MBXL	MBLX39; E430034C16Rik; MBLX; A530038J18Rik; CHCR; MBXL
Mus musculus	RefSeq	ILMN_186854	ILMN_231308	HIST1H4H	NM_153173.2	NM_153173.2		69386	141802886	NM_153173.2	Hist1h4h	NP_694813.1	ILMN_2664129	007400377	S	47	TTTCTTCAGCAAGTACACCATGTCTGGTCGTGGCAAGGGCGGTAAAGGTC	13	+	23622965-23622983:23622984-23623014	13qA3.1	Mus musculus histone cluster 1, H4h (Hist1h4h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1700024H08Rik; MGC41466	1700024H08Rik; MGC41466
Mus musculus	RefSeq	ILMN_226638	ILMN_226638	RYR1	NM_009109.1	NM_009109.1		20190	45597438	NM_009109.1	Ryr1	NP_033135.1	ILMN_2842357	005420435	S	15300	CCAGGCAGCTGGGGACAGATGATCCTGAACTAGACCAATAAATCCTGTGC	7	-	28712112-28712161	7qB1	Mus musculus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules) [goid 30314] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence TAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]	skrr; Ryr; AI528790	skrr; Ryr; AI528790
Mus musculus	RefSeq	ILMN_222337	ILMN_222337	SCN11A	NM_011887.3	NM_011887.3		24046	133987590	NM_011887.3	Scn11a	NP_036017.3	ILMN_1239210	002350008	S	5697	GCTTTGTTGCAGGTGTTTCTACCAGTGCTGCGGATTTGGGTGTATGGCTC	9	-	119662971-119663020	9qF4	Mus musculus sodium channel, voltage-gated, type XI, alpha (Scn11a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence IEA]	NaT; NSS2; NaN; SNS2	NaT; NSS2; NaN; SNS2
Mus musculus	MEEBO	ILMN_223934	ILMN_223934	PROCR	scl20048.3_40				6755175	NM_011171	Procr		ILMN_2771774	007320195	S	1300	TTAAATTTCTTATTTATGTAAAAGGTGTACTTATATCTTCTATTTTATTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of coagulation [goid 50819] [evidence TAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence ISS]		
Mus musculus	MEEBO	ILMN_213587	ILMN_213587	1700029I08RIK	scl50852.1_651	NM_183282.1			34304082	NM_183282.1	1700029I08Rik		ILMN_2638674	002810538	S	1293	ACCGAAAATGCTACTAACATGGGGAAAGGCGGGAAGGGCTAAGGGCAGTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192926	ILMN_192926	1110003F05RIK	scl50323.1_312						1110003F05Rik		ILMN_1259609	001230433	S	19	CTATCTTCAGGCACTACCTTCGATACCCTGCCTTCTCAAAAAAGGTGGCC										
Mus musculus	RefSeq	ILMN_214863	ILMN_214863	PRP2	NM_031499.2	NM_031499.2		83380	119964709	NM_031499.2	Prp2	NP_113687.2	ILMN_2936574	000050600	S	553	CTGAGACCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGATA	6	+	132550322-132550371	6qG1	Mus musculus proline rich protein 2 (Prp2), mRNA.				MP14	MP14
Mus musculus	RefSeq	ILMN_195927	ILMN_248527	DENND1B	NM_181347.2	NM_181347.2		329260	142368722	NM_181347.2	Dennd1b	NP_851992.1	ILMN_1256919	001740392	S	2513	CTGCTGTGCTGTTAAATCAGGTACTAACTTGTACATAGGCTGAAAGTGTG	1	+	141067061-141067110	1qF	Mus musculus DENN/MADD domain containing 1B (Dennd1b), mRNA.				4930467M19Rik; 4632404N19Rik; F730008N07Rik; MGC51484	4930467M19Rik; 4632404N19Rik; F730008N07Rik; MGC51484
Mus musculus	RefSeq	ILMN_213992	ILMN_213992	TRAPPC6A	NM_025960.3	NM_025960.3		67091	141802534	NM_025960.3	Trappc6a	NP_080236.2	ILMN_2643057	004560162	S	395	CCTTCTGTGCGGCGCCCTCCATACACTGGGCTTCCAGAGCCTGGTCACCG	7	+	20100573-20100622	7qA3	Mus musculus trafficking protein particle complex 6A (Trappc6a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		4930519D19Rik; mhyp; MGC117907; AI480686; 1810073E21Rik	4930519D19Rik; mhyp; MGC117907; AI480686; 1810073E21Rik
Mus musculus	RefSeq	ILMN_220678	ILMN_220678	AK3L1	NM_009647.4	NM_009647.4		11639	146149300	NM_009647.4	Ak3l1	NP_033777.1	ILMN_1256564	006200092	S	3422	CTGCACAATTCTTGCCAGAACAAATGCCATCAACTGCCTCAGGGCACTCC				4qC6	Mus musculus adenylate kinase 3-like 1 (Ak3l1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate [goid 19201] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor) [goid 16776] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Ak-3; Ak-4; Ak3; D4Ertd274e; Ak4	Ak-3; Ak-4; Ak3; D4Ertd274e; Ak4
Mus musculus	RefSeq	ILMN_196445	ILMN_196445	4921517B04RIK	XM_131208.3	XM_131208.3			38077266	XM_131208.3	4921517B04Rik		ILMN_1233318	000160221	S	940	GTTAAAAGGGGGGTTCTGCTAAACGCGCTGAAGCTGCTGAACATCAGGTG										
Mus musculus	RefSeq	ILMN_213531	ILMN_213531	HTR1F	NM_008310.2	NM_008310.2		15557	31542975	NM_008310.2	Htr1f	NP_032336.1	ILMN_2933261	002900072	S	2255	GCCCCCTGTCTAGGAATCAAGCTCTAAACACTAAGGACCTTAACTAACTC	16	-	64924829-64924878	16qC1.3	Mus musculus 5-hydroxytryptamine (serotonin) receptor 1F (Htr1f), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 51378] [evidence ISS]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISS]	Htr1eb	Htr1eb
Mus musculus	RefSeq	ILMN_213531	ILMN_213531	HTR1F	NM_008310.2	NM_008310.2		15557	31542975	NM_008310.2	Htr1f	NP_032336.1	ILMN_1225277	004210050	S	1984	GCAGCTCCTATTTAGCCTTAGCAGAGAAGATATGAAGCTCAGCGGCTTTG	16	-	64925100-64925149	16qC1.3	Mus musculus 5-hydroxytryptamine (serotonin) receptor 1F (Htr1f), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 51378] [evidence ISS]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISS]	Htr1eb	Htr1eb
Mus musculus	RefSeq	ILMN_252645	ILMN_252645	OLFR1472	NM_146690.2	NM_146690.2		258685	110671325	NM_146690.2	Olfr1472	NP_666901.2	ILMN_2872079	003830603	S	869	TAAGGAACAAGGAGGTAAAAAATGCATTTAAGAAGGTTGTTGGAAAATTA	19	-	13528087-13528136	19qA	Mus musculus olfactory receptor 1472 (Olfr1472), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-16	MOR202-16
Mus musculus	RefSeq	ILMN_192133	ILMN_244513	MASTL	NM_025979.3	NM_025979.3		67121	142383836	NM_025979.3	Mastl	NP_080255.2	ILMN_1238125	002970044	S	2941	CACTCTAAATAGAGGGAGTGAGCCGTAAGCTTATCTTTATCTGCTGATTT	2	-	22973617-22973666	2qA3	Mus musculus microtubule associated serine/threonine kinase-like (Mastl), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MGC117975; C88295; 2700091H24Rik; THC2	MGC117975; C88295; 2700091H24Rik; THC2
Mus musculus	RefSeq	ILMN_192133	ILMN_244513	MASTL	NM_025979.3	NM_025979.3		67121	142383836	NM_025979.3	Mastl	NP_080255.2	ILMN_2722413	006560689	S	2702	CAGTAATATGCTACTTAATACTAGATTGGTCTAAATGGGATAAAAGTCAT	2	-	22973856-22973905	2qA3	Mus musculus microtubule associated serine/threonine kinase-like (Mastl), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MGC117975; C88295; 2700091H24Rik; THC2	MGC117975; C88295; 2700091H24Rik; THC2
Mus musculus	RefSeq	ILMN_192133	ILMN_244513	MASTL	NM_025979.3	NM_025979.3		67121	142383836	NM_025979.3	Mastl	NP_080255.2	ILMN_2621187	004290553	S	2700	TACAGTAATATGCTACTTAATACTAGATTGGTCTAAATGGGATAAAAGTC	2	-	22973858-22973907	2qA3	Mus musculus microtubule associated serine/threonine kinase-like (Mastl), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MGC117975; C88295; 2700091H24Rik; THC2	MGC117975; C88295; 2700091H24Rik; THC2
Mus musculus	RefSeq	ILMN_209433	ILMN_225550	CST13	NM_027024.3	NM_027024.3		69294	133892558	NM_027024.3	Cst13	NP_081300.1	ILMN_2595725	000670671	S	628	AGCTCCAAACCATGGAAGTTTGAACTTAAAATGCTGAAGAAGCAATGCAA	2	+	148656009-148656058	2qG3	Mus musculus cystatin 13 (Cst13), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	Mtcg1; 1700006C19Rik; Cymg1	Mtcg1; 1700006C19Rik; Cymg1
Mus musculus	RefSeq	ILMN_254254	ILMN_254254	OLFR543	NM_001011782.1	NM_001011782.1		257947	58801333	NM_001011782.1	Olfr543	NP_001011782.1	ILMN_3161428	005490341	S	948	GTCACCCCAAGACAGCAGAGAGAAGTCACAGAATGTGAGAGGGGAGAGGG	7	-	109625385-109625434	7qE3	Mus musculus olfactory receptor 543 (Olfr543), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR42-2	MOR42-2
Mus musculus	RefSeq	ILMN_211118	ILMN_211118	AARSD1	NM_144829.1	NM_144829.1		69684	21450212	NM_144829.1	Aarsd1	NP_659078.1	ILMN_2918440	000520500	S	1146	CAGGGTGGCTGAAGTCTTGGAAGGCAAAGGAGCAGGGAAGAAGGGCCGCT	11	-	101268291-101268338:101269445-101269446	11qD	Mus musculus alanyl-tRNA synthetase domain containing 1 (Aarsd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules [goid 43039] [evidence IEA]; The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6419] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala) [goid 4813] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the ligation of two substances via a carbon-oxygen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate, to form aminoacyl-tRNA or a related compound [goid 16876] [evidence IEA]	2310044P18Rik; 1110069E20Rik; AA589600	2310044P18Rik; 1110069E20Rik; AA589600
Mus musculus	RefSeq	ILMN_215455	ILMN_215455	CHCHD7	NM_181391.2	NM_181391.2		66433	142370747	NM_181391.2	Chchd7	NP_852056.1	ILMN_1240104	007570025	S	475	GACAGGGAAAGGTGTTCCAGTTACTTCTTGAAGTACAAAAACTGCCGGCG	4	+	3869910-3869959	4qA1	Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 7 (Chchd7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810049H20Rik	1810049H20Rik
Mus musculus	RefSeq	ILMN_228367	ILMN_228367	CXX1B	NM_001018063.1	NM_001018063.1		553127	65787324	NM_001018063.1	Cxx1b	NP_001018073.1	ILMN_3084160	007210446	A	16	ATCCAGCAAAGCACAGCTGACCCCATCAAGAGTCCGGAGAGCCTCCAGCC	X	-	50973520-50973569	XqA5	Mus musculus CAAX box 1 homolog B (human) (Cxx1b), mRNA.				Mart8c	Mart8c
Mus musculus	MEEBO	ILMN_224027	ILMN_224027	OLFR1094	scl4924.1.1_49				22129572	NM_146365	Olfr1094		ILMN_2773408	001190100	S	647	GCTCCATTGAGATCATCACCATCCTGATTGTCCTGGTCTCTTACAGTTTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_232386	ILMN_232386	IL12RB1	NM_008353.1	NM_008353.1		16161	6680398	NM_008353.1	Il12rb1	NP_032379.1	ILMN_2799452	003780768	S	1969	AGATGCGCTGGTGGTCGAGATGCCCGGAGACAGAGGCGACGGGACAGAGT	8	+	73344464-73344513	8qB3.3	Mus musculus interleukin 12 receptor, beta 1 (Il12rb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	CD212; IL-12R[b]	CD212; IL-12R[b]
Mus musculus	RefSeq	ILMN_220356	ILMN_232386	IL12RB1	NM_008353.1	NM_008353.1		16161	6680398	NM_008353.1	Il12rb1	NP_032379.1	ILMN_1227900	003420433	S	1953	AGGTGTTGTACCCGCGAGATGCGCTGGTGGTCGAGATGCCCGGAGACAGA	8	+	73344448-73344497	8qB3.3	Mus musculus interleukin 12 receptor, beta 1 (Il12rb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	CD212; IL-12R[b]	CD212; IL-12R[b]
Mus musculus	MEEBO	ILMN_211441	ILMN_211441	1700034H15RIK	scl074265.2_43	XM_358552.1			38073691	XM_358552.1	1700034H15Rik		ILMN_2615928	007100523	S	305	CCTGGCTTGTAACTTCACACCTTCATTGGGGTAGCAAGCTGGTCTGAAGC										
Mus musculus	RefSeq	ILMN_196667	ILMN_196667	B430212C06RIK	XM_148862.5	XM_148862.5			38084046	XM_148862.5	B430212C06Rik		ILMN_2525303	001110204	S	456	GCCTGAGCAGCCCACAACCTCATCTGTTCCCCCAGACATTCAGGGATCCA										
Mus musculus	RefSeq	ILMN_228149	ILMN_228149	2310002B06RIK	NM_181649.4	NM_181649.4		53951	118130682	NM_181649.4	2310002B06Rik	NP_857632.2	ILMN_2901363	006590189	S	1949	GAGGACTAGAGCCAACTTACCCTGGGTGACCAGGCAACATCCCTGTGGCA	17	+	79245463-79245512	17qE3	Mus musculus RIKEN cDNA 2310002B06 gene (2310002B06Rik), mRNA.				MGC106516; C80922; L26697	MGC106516; C80922; L26697
Mus musculus	RefSeq	ILMN_195024	ILMN_228149	2310002B06RIK	NM_181649.4	NM_181649.4		53951	118130682	NM_181649.4	2310002B06Rik	NP_857632.2	ILMN_2511868	005360368	S	983	ATCTTCGAATTGCCCAGGACCGACCTCTGCGGATCACGACTGAGATTGTT	17	+	79244497-79244539:79244540-79244546	17qE3	Mus musculus RIKEN cDNA 2310002B06 gene (2310002B06Rik), mRNA.				MGC106516; C80922; L26697	MGC106516; C80922; L26697
Mus musculus	RefSeq	ILMN_211919	ILMN_324421	D130037M23RIK	XM_001474094.1	XM_001474094.1		328330	149264655	XM_001474094.1	D130037M23Rik	XP_001474144.1	ILMN_1221154	005490148	S	3746	GCTTATACAGCCCACCAGAAAAATGGGCCAGAGAGAGGGCACTGGCACTG	13	+	104713982-104714031	13qD1	PREDICTED: Mus musculus RIKEN cDNA D130037M23 gene (D130037M23Rik), mRNA.					
Mus musculus	Riken	ILMN_201979	ILMN_201979	1700021P10RIK	ri|1700021P10|ZX00037F17|AK006228|1916					AK006228	1700021P10Rik		ILMN_1223218	001740079	S	731	GGTCCCCAACACCGTGCCCAACCTCAGCACTTTTCTGTACTTCCTTCTAG										
Mus musculus	Riken	ILMN_204038	ILMN_204038	A730011P13RIK	ri|A730011P13|PX00149K17|AK042629|2172					AK042629	A730011P13Rik		ILMN_1213091	004640524	S	2069	ACTCAGTTTCATCTGTTTAGGGTGTAGATGGAGATAGTCTCTAATTCCCG										
Mus musculus	RefSeq	ILMN_214984	ILMN_214984	ERMAP	NM_013848.1	NM_013848.1		27028	7305040	NM_013848.1	Ermap	NP_038876.1	ILMN_2801970	000050605	S	4002	AGGTCAGAGTACTAGAAAGAGACAAGTTTTAGTTGCAGTGTAAGGTAGGG	4	-	118848526-118848575	4qD2.1	Mus musculus erythroblast membrane-associated protein (Ermap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI666418; AA409279	AI666418; AA409279
Mus musculus	RefSeq	ILMN_214984	ILMN_214984	ERMAP	NM_013848.1	NM_013848.1		27028	7305040	NM_013848.1	Ermap	NP_038876.1	ILMN_1257143	001340176	S	3741	CAAGGCACTTTCAAGTCATACCCACATATGTGTTTCGGCCTGTTTGTGGA	4	-	118848787-118848836	4qD2.1	Mus musculus erythroblast membrane-associated protein (Ermap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI666418; AA409279	AI666418; AA409279
Mus musculus	RefSeq	ILMN_244302	ILMN_244302	LRRC43	NM_001033461.2	NM_001033461.2		381741	141802033	NM_001033461.2	Lrrc43	NP_001028633.1	ILMN_3160488	003940564	S	1659	AAGGATAAGGTCCACAAGAAGAAAAAGGAGCCGCCCAGGGAGCTGCGGCA	5	+	123953646-123953648:123953754-123953800	5qF	Mus musculus leucine rich repeat containing 43 (Lrrc43), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm1061	Gm1061
Mus musculus	RefSeq	ILMN_237231	ILMN_237231	RNF26	NM_153762.3	NM_153762.3		213211	86262132	NM_153762.3	Rnf26	NP_717095.2	ILMN_2780420	007160180	S	1459	GTCTTCTTTGCCCCCGAAGGCGGCGACTCTGCCAAGCCTCAAGCCATATA	9	-	43919626-43919675	9qA5.1	Mus musculus ring finger protein 26 (Rnf26), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	8030450I18Rik	8030450I18Rik
Mus musculus	RefSeq	ILMN_186152	ILMN_237231	RNF26	NM_153762.3	NM_153762.3		213211	86262132	NM_153762.3	Rnf26	NP_717095.2	ILMN_2433047	001230138	S	2090	TCTACTCATTCCCTACATGGCATAGAACATAGCATTCCTCCTGGGCTCTC	9	-	43918995-43919044	9qA5.1	Mus musculus ring finger protein 26 (Rnf26), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	8030450I18Rik	8030450I18Rik
Mus musculus	RefSeq	ILMN_210444	ILMN_210444	C1S	NM_144938.2	NM_144938.2		50908	148277053	NM_144938.2	C1s	NP_659187.2	ILMN_1257046	002360022	S	1110	TGGGGCAAAAGAAGGGTTGGAAGCTTCGTTACCATGGAGATCCCATCTCC				6qF2	Mus musculus complement component 1, s subcomponent (C1s), transcript variant 1, mRNA.		Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC132830; C1sa; AI255193; MGC37773; AA959438; AI327365	MGC132830; C1sa; AI255193; MGC37773; AA959438; AI327365
Mus musculus	RefSeq	ILMN_223572	ILMN_223572	TMEM100	NM_026433.2	NM_026433.2		67888	142353421	NM_026433.2	Tmem100	NP_080709.1	ILMN_1224014	001410168	S	1390	CGTTCCACCAAAAGCCTACATTGGCTTGGCATTCCCACGTACCTAAGAAG	11	+	89897445-89897494	11qC	Mus musculus transmembrane protein 100 (Tmem100), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1810057C19Rik; AV011897	1810057C19Rik; AV011897
Mus musculus	RefSeq	ILMN_209276	ILMN_209276	CRKRS	NM_026952.1	NM_026952.1		69131	30794423	NM_026952.1	Crkrs	NP_081228.1	ILMN_2594269	003520537	S	1020	CCCAGCCCCTATGGCCGAAGGCGATCAAGCAGCCCTTTCCTGAGCAAGAG	11	+	98065647-98065696	11qD	Mus musculus Cdc2-related kinase, arginine/serine-rich (Crkrs), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AI646528; 1810022J16Rik; MGC141525; Pksc; Crk7	AI646528; 1810022J16Rik; MGC141525; Pksc; Crk7
Mus musculus	RefSeq	ILMN_209276	ILMN_209276	CRKRS	NM_026952.1	NM_026952.1		69131	30794423	NM_026952.1	Crkrs	NP_081228.1	ILMN_1254548	004920458	S	1020	ACCCAGCCCCTATGGCCGAAGGCGATCAAGCAGCCCTTTCCTGAGCAAGA	11	+	98065647-98065696	11qD	Mus musculus Cdc2-related kinase, arginine/serine-rich (Crkrs), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AI646528; 1810022J16Rik; MGC141525; Pksc; Crk7	AI646528; 1810022J16Rik; MGC141525; Pksc; Crk7
Mus musculus	RefSeq	ILMN_209276	ILMN_209276	CRKRS	NM_026952.1	NM_026952.1		69131	30794423	NM_026952.1	Crkrs	NP_081228.1	ILMN_2668253	003060725	S	4783	GTCTGTGATCTGCTGTTATTAGCGGACAAAGCTAATACACTCATATGTCT	11	+	98107964-98108013	11qD	Mus musculus Cdc2-related kinase, arginine/serine-rich (Crkrs), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AI646528; 1810022J16Rik; MGC141525; Pksc; Crk7	AI646528; 1810022J16Rik; MGC141525; Pksc; Crk7
Mus musculus	MEEBO	ILMN_190245	ILMN_190245	C430014D17RIK	scl22951.13_37				21314853	NM_139304	C430014D17Rik		ILMN_2468451	002680689	S	17	CTCAGATCTCATCTGAACCCCCAAAGGCAACTGTTCCACAGTCTGTCTCC										
Mus musculus	Riken	ILMN_202771	ILMN_202771	5830430H09RIK	ri|5830430H09|PX00039E01|AK020021|2224					AK020021	5830430H09Rik		ILMN_2552170	006840201	S	216	GCTGAAGTTAGTCAGTGGACCAGGCTATGTGAACTCACCATCCCTTTGGC										
Mus musculus	RefSeq	ILMN_201237	ILMN_201237	LOC384972	XM_357967.1	XM_357967.1			38090039	XM_357967.1	LOC384972		ILMN_1252368	004010672	S	420	TCAAGGCCCCCTGATTACCCTGCGCTATCCTTGGAACCCATCTGAGAATG										
Mus musculus	RefSeq	ILMN_222044	ILMN_255227	HMGA2	NM_010441.2	NM_010441.2		15364	144922693	NM_010441.2	Hmga2	NP_034571.1	ILMN_2743802	000160270	S	3489	GTTGTGAGTCGCCAAAGGAGCTATGGAGAGATTAAAATTCAACATGACTG	10	-	119798968-119799017	10qD2	Mus musculus high mobility group AT-hook 2 (Hmga2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	pg; pygmy; Hmgic; HMGI-C; 9430083A20Rik; MGC103393	pg; pygmy; Hmgic; HMGI-C; 9430083A20Rik; MGC103393
Mus musculus	MEEBO	ILMN_186126	ILMN_186126	WDR8	scl24642.9.961_29	NM_021499.1			10946907	NM_021499.1	Wdr8		ILMN_2432829	006290253	S	2	TGCACAGGAGGAAGCAAGGTGTACCTGTGGTCCCCAGCAGGCTGCGTGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Mus musculus	Riken	ILMN_202007	ILMN_202007	2600001G24RIK	ri|2600001G24|ZX00044J01|AK011135|1842					AK011135	2600001G24Rik		ILMN_1255982	002940129	S	1504	GAAGCTTGTGAGTGGCCATGTGGGTGCCAGGAATACAACCCAGCTCCTCC										
Mus musculus	RefSeq	ILMN_199771	ILMN_199771	LOC383916	XM_357322.1	XM_357322.1			38077081	XM_357322.1	LOC383916		ILMN_1237890	005570441	S	139	CTTGGAGATATGGCAAAGGCTGACAAGGCTCGCGAGCATCCTGGCTTATC										
Mus musculus	RefSeq	ILMN_211010	ILMN_211010	AKT3	NM_011785.2	NM_011785.2		23797	45433563	NM_011785.2	Akt3	NP_035915.2	ILMN_2904321	000050603	S	4307	CCGTCTGTACTGTCTACATCACGGTTCCCTTAGCTTGCTCCTGGTAGTGC	1	-	178952624-178952673	1qH4	Mus musculus thymoma viral proto-oncogene 3 (Akt3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence ISO]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence ISO]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISO]	AI851531; D930002M15Rik	AI851531; D930002M15Rik
Mus musculus	RefSeq	ILMN_211010	ILMN_211010	AKT3	NM_011785.2	NM_011785.2		23797	45433563	NM_011785.2	Akt3	NP_035915.2	ILMN_1259290	007150521	S	1516	TCTTAGACTTTGCCTGAGACTGATTCCTGGACATCTCTACCAGTCCTCGC	1	-	178955415-178955464	1qH4	Mus musculus thymoma viral proto-oncogene 3 (Akt3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence ISO]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence ISO]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISO]	AI851531; D930002M15Rik	AI851531; D930002M15Rik
Mus musculus	Riken	ILMN_201956	ILMN_201956	0610011I19RIK	ri|0610011I19|R000002D04|AK002548|1137					AK002548	0610011I19Rik		ILMN_2545915	005910240	S	983	AGCAGTAGCAAGAACAGCATCCAAGCTAGCCACATCATCACCCGTGCCCC										
Mus musculus	RefSeq	ILMN_254330	ILMN_254330	UPK1A	NM_026815.1	NM_026815.1		109637	58037126	NM_026815.1	Upk1a	NP_081091.1	ILMN_2907788	001110762	S	1199	AGGTAGCGAAAAGAGGAGGGTGACACGTTCTGCCGTGGTCATTGTGGGGG	7	-	30311911-30311960	7qB1	Mus musculus uroplakin 1A (Upk1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Interacting selectively with any monosaccharide. Monosaccharides are the simplest carbohydrates; they are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H[CHOH]nC(=O)[CHOH]mH with three or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides [goid 48029] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Upk1; Tspan21; C87192; AU019298; 1110031P12Rik	Upk1; Tspan21; C87192; AU019298; 1110031P12Rik
Mus musculus	Riken	ILMN_206687	ILMN_206687	EPHA5	ri|E530011F10|PX00319M09|AK089130|2757					AK089130	Epha5		ILMN_1235217	004060332	S	2685	TCCTCAACAGTCACAATGTTCTCCAGAAGCATCCAAGTCCCACTCTCTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_250438	ILMN_250438	EDG5	NM_010333.2	NM_010333.2		14739	45433561	NM_010333.2	Edg5	NP_034463.2	ILMN_2964522	007210593	S	2673	AAGGCTGAAGAAGGGGAGATTTGGGAGGCAAGGAGCCTGTCGGGAGTGTG	9	-	20716434-20716483	9qA3	Mus musculus endothelial differentiation, sphingolipid G-protein-coupled receptor, 5 (Edg5), mRNA.				S1P2; LPb2; H218; Gpcr13; 1100001A16Rik	S1P2; LPb2; H218; Gpcr13; 1100001A16Rik
Mus musculus	RefSeq	ILMN_219239	ILMN_318332	LOC100045887	XM_001475106.1	XM_001475106.1		100045887	149252952	XM_001475106.1	LOC100045887	XP_001475156.1	ILMN_2706061	004200497	S	2616	CCTGGAGTTCCACCAGCAACCATGAGTGGTTCCATGATGGGAAGCGACAT					PREDICTED: Mus musculus similar to PTB-associated splicing factor (LOC100045887), mRNA.					
Mus musculus	RefSeq	ILMN_218797	ILMN_319066	2310046A06RIK	XM_001478683.1	XM_001478683.1		69642	149260080	XM_001478683.1	2310046A06Rik	XP_001478733.1	ILMN_2700344	000650088	S	2466	GTTTATGAGCCCAACCCTTTCAGTAAATACCTTGAAGACAACAGTGGCCT	9	-	77012584-77012633	9qD	PREDICTED: Mus musculus RIKEN cDNA 2310046A06 gene (2310046A06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223880	ILMN_238309	FGF15	NM_008003.2	NM_008003.2		14170	118131051	NM_008003.2	Fgf15	NP_032029.1	ILMN_2770929	004730037	S	1578	GCCTGTGTCAACCTGGACCCCTCATTTACAAACAAGATTAGGAAGCCCCA	7	+	152086627-152086676	7qF5	Mus musculus fibroblast growth factor 15 (Fgf15), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198415	ILMN_314209	GM705	XM_001474485.1	XM_001474485.1		278795	149270599	XM_001474485.1	Gm705	XP_001474535.1	ILMN_1238444	002320056	S	734	ACCCGCTTCGTGCGCTCCGAGTTTTCTCCTACGACCACAACCCAGTCACT				19qA	PREDICTED: Mus musculus gene model 705, (NCBI) (Gm705), mRNA.					
Mus musculus	RefSeq	ILMN_218890	ILMN_218890	NCAPH2	NM_025795.2	NM_025795.2		52683	31542462	NM_025795.2	Ncaph2	NP_080071.2	ILMN_2701501	001570138	S	3092	CTTTAACCAGGGAGTCTCAGCCTCATGACCCCAACCTCTGGAGAACCCAC	15	+	89200439-89200488	15qE3	Mus musculus non-SMC condensin II complex, subunit H2 (Ncaph2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]		D15Ertd785e; AI255179; 2610524G04Rik; 0610010J20Rik; MGC6766	D15Ertd785e; AI255179; 2610524G04Rik; 0610010J20Rik; MGC6766
Mus musculus	RefSeq	ILMN_218890	ILMN_218890	NCAPH2	NM_025795.2	NM_025795.2		52683	31542462	NM_025795.2	Ncaph2	NP_080071.2	ILMN_3009334	001170019	S	3154	AAGCCTCCCTGTGGATTCTTGGAAGCACCGCGAATATGCTTTGCCTGGGC	15	+	89200501-89200550	15qE3	Mus musculus non-SMC condensin II complex, subunit H2 (Ncaph2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]		D15Ertd785e; AI255179; 2610524G04Rik; 0610010J20Rik; MGC6766	D15Ertd785e; AI255179; 2610524G04Rik; 0610010J20Rik; MGC6766
Mus musculus	Riken	ILMN_207104	ILMN_207104	E530020K13RIK	ri|E530020K13|PX00319G12|AK089161|1123					AK089161	E530020K13Rik		ILMN_1232313	003800044	S	825	TTGGGGCATTAGGTTGTGGTTATCTTTGGGAGTCATTGCACCTACCACAC										
Mus musculus	RefSeq	ILMN_207274	ILMN_312236	LOC100046382	XM_001476831.1	XM_001476831.1		100046382	149253454	XM_001476831.1	LOC100046382	XP_001476881.1	ILMN_1253169	004780025	S	325	GGGATCAGCCCTAGGACTTGAGCACACCAGACAAGTGTTTCACCCCTGCC					PREDICTED: Mus musculus hypothetical protein LOC100046382 (LOC100046382), mRNA.					
Mus musculus	RefSeq	ILMN_197607	ILMN_251586	LOC667509	XM_990961.1	XM_990961.1		667509	94397088	XM_990961.1	LOC667509	XP_996055.1	ILMN_2528721	004210280	S	263	TTCCTTATTCGACAAACGTCTTCTTCTACTGCAAAAGAGAGGAGCGGCCG	14	+	51785734-51785783		PREDICTED: Mus musculus similar to T-cell receptor alpha chain V region HPB-MLT precursor (LOC667509), mRNA.					
Mus musculus	Riken	ILMN_206763	ILMN_206763	GRIN2A	ri|D930018L04|PX00201O03|AK086290|1110					AK086290	Grin2a		ILMN_2582530	004730441	S	646	GTAAGGCCAGGAGGAGATGGACTGCCAGGGTCCTGGAGGGGTTGTTCTAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD [goid 17146] [evidence IPI]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence ISA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process by which an organism enters and maintains a periodic, readily reversible state of reduced awareness and metabolic activity. Usually accompanied by physical relaxation, the onset of sleep in humans and other mammals is marked by a change in the electrical activity of the brain [goid 30431] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42177] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42428] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IGI]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that modulates the establishment or extent of the postsynaptic membrane potential, which is generated by changes in the membrane potential of the post synaptic neuron that receives information at a synapse. The presynaptic neuron releases neurotransmitters into the synaptic cleft which bind to receptors on the postsynaptic neuron. After being bound by the neurotransmitters, these receptors can open or close an ion channel, allowing ions to enter or leave the cell and therefore altering the membrane potential of the postsynaptic neuron [goid 60078] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 51930] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another along an axis [goid 33058] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IGI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IGI]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IMP]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IGI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP]		
Mus musculus	RefSeq	ILMN_211665	ILMN_211665	PPOX	NM_008911.2	NM_008911.2		19044	114431259	NM_008911.2	Ppox	NP_032937.1	ILMN_2826816	003870221	S	1617	CAGCTATGCAATTCCTGACGGCCCAGAGGTTGCCCCTGACTTTGGCTGGA	1	-	173207277-173207326	1qH3	Mus musculus protoporphyrinogen oxidase (Ppox), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Located in the mitochondrial inner membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31304] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: protoporphyrinogen-IX + O2 = protoporphyrin-IX + H2O2 [goid 4729] [evidence IDA]	Ppo	Ppo
Mus musculus	RefSeq	ILMN_211665	ILMN_211665	PPOX	NM_008911.2	NM_008911.2		19044	114431259	NM_008911.2	Ppox	NP_032937.1	ILMN_2706938	003370538	S	740	AAAGAGCCTGATGAAACTGTGCACAGTTTTGCCCAGCGCCGCCTTGGACC	1	-	173210003-173210052	1qH3	Mus musculus protoporphyrinogen oxidase (Ppox), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Located in the mitochondrial inner membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31304] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: protoporphyrinogen-IX + O2 = protoporphyrin-IX + H2O2 [goid 4729] [evidence IDA]	Ppo	Ppo
Mus musculus	RefSeq	ILMN_257155	ILMN_257155	DNAJC19	NM_001026211.1	NM_001026211.1		67713	71061473	NM_001026211.1	Dnajc19	NP_001021382.1	ILMN_3030148	006330242	I	420	CCCTCTGGTGGAAGAAGGTCTGAAACCCATACCAATCTGTCGCAGCTGCT	3	-	33956985-33957034	3qA3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 19 (Dnajc19), transcript variant 2, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	1810055D05Rik; AA959924; Tim14	1810055D05Rik; AA959924; Tim14
Mus musculus	RefSeq	ILMN_257155	ILMN_257155	DNAJC19	NM_001026211.1	NM_001026211.1		67713	71061473	NM_001026211.1	Dnajc19	NP_001021382.1	ILMN_3103439	002070543	A	340	GGTGTAAGCCCTACTGCCAATAAAGGGAAGATCAGGGATGCTCATCGCCG	3	-	33977725-33977767:33978127-33978133	3qA3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 19 (Dnajc19), transcript variant 2, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	1810055D05Rik; AA959924; Tim14	1810055D05Rik; AA959924; Tim14
Mus musculus	RefSeq	ILMN_202005	ILMN_257155	DNAJC19	NM_001026211.1	NM_001026211.1		67713	71061473	NM_001026211.1	Dnajc19	NP_001021382.1	ILMN_1215602	003610037	S	600	GACCACCATGTGAGATCACCTTTACCCACTTGACCCATCTTCCCTAGCCC	3	-	33956805-33956842:33956843-33956854	3qA3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 19 (Dnajc19), transcript variant 2, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	1810055D05Rik; AA959924; Tim14	1810055D05Rik; AA959924; Tim14
Mus musculus	Riken	ILMN_202997	ILMN_202997	DSG3	ri|4732482D04|PX00052F01|AK029018|3483					AK029018	Dsg3		ILMN_2553938	007050762	S	2943	CTGCGGGTGTTTCCAGAACGTTTCAACTAAGGAAGGAAAACACACTCCAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence TAS]; A small junction assembled during the cellularization stage of insect embyrogenesis; spot adherens junctions later fuse to form the zonula adherens [goid 5914] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191348	ILMN_214595	NKIRAS1	NM_023526.3	NM_023526.3		69721	84872198	NM_023526.3	Nkiras1	NP_076015.2	ILMN_1238326	005910053	S	3395	GTGTGGAATAGGAATTGTTCAGTCAATTGGTTTAGACTTCTTACGTCTGC	14	+	19115320-19115369	14qA2	Mus musculus NFKB inhibitor interacting Ras-like protein 1 (Nkiras1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	KBRAS1; 2400004O09Rik; kappaB-Ras1	KBRAS1; 2400004O09Rik; kappaB-Ras1
Mus musculus	RefSeq	ILMN_214595	ILMN_214595	NKIRAS1	NM_023526.3	NM_023526.3		69721	84872198	NM_023526.3	Nkiras1	NP_076015.2	ILMN_2656189	006510315	S	2441	CCTGCCTGGTGTTTCTGTTTTTTCTTTTGGCTGCATTTAGATCTTGTGCT	14	+	19114366-19114415	14qA2	Mus musculus NFKB inhibitor interacting Ras-like protein 1 (Nkiras1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	KBRAS1; 2400004O09Rik; kappaB-Ras1	KBRAS1; 2400004O09Rik; kappaB-Ras1
Mus musculus	RefSeq	ILMN_214595	ILMN_214595	NKIRAS1	NM_023526.3	NM_023526.3		69721	84872198	NM_023526.3	Nkiras1	NP_076015.2	ILMN_2649696	001070195	S	944	TTTTGCCTTTATTTGAAACCTGTTCTTATTTTGTTATTTATTCTGCACTT	14	+	19112869-19112918	14qA2	Mus musculus NFKB inhibitor interacting Ras-like protein 1 (Nkiras1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	KBRAS1; 2400004O09Rik; kappaB-Ras1	KBRAS1; 2400004O09Rik; kappaB-Ras1
Mus musculus	RefSeq	ILMN_191357	ILMN_191357	WDR42A	NM_153555.1	NM_153555.1		98193	23956325	NM_153555.1	Wdr42a	NP_705783.1	ILMN_2960335	007550139	S	2688	CTCTAAATGGGGGCTGGGATGGGGACTGAGGAGACGTGGGAGGGACAAGA	1	+	174125426-174125475	1qH3	Mus musculus WD repeat domain 42A (Wdr42a), mRNA.				C76055; AA408877; AA792214; MGC38511; D1Ucla4; H326; AU018973	C76055; AA408877; AA792214; MGC38511; D1Ucla4; H326; AU018973
Mus musculus	RefSeq	ILMN_221360	ILMN_312733	KRTAP2-4	XM_001472331.1	XM_001472331.1		71453	149274257	XM_001472331.1	Krtap2-4	XP_001472381.1	ILMN_2734460	004210142	S	616	CAGCTAGTCATCTGCATAGCTCTAGACATATTCTAGCTCCCATCAGCAGA				11qD	PREDICTED: Mus musculus keratin associated protein 2-4 (Krtap2-4), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_236512	ILMN_236512	SHD	NM_009168.1	NM_009168.1		20420	6677938	NM_009168.1	Shd	NP_033194.1	ILMN_2858666	002690743	S	1425	CCTGGGAATCCACACGGTGGCAGCCGAGAGCTGCAAGTCGTTCTCTGATT	17	+	56115935-56115984	17qD	Mus musculus src homology 2 domain-containing transforming protein D (Shd), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI413439; MGC118480	AI413439; MGC118480
Mus musculus	RefSeq	ILMN_256201	ILMN_256201	AA388235	NM_001013793.1	NM_001013793.1		433100	85701479	NM_001013793.1	AA388235	NP_001013815.1	ILMN_2948014	002260347	S	3584	AATGCAGTGGGTTTAATTCTCAACAGCGCCCAATTGCCAAAGGCAGGGTG	17	+	33595529-33595578	17qB1	Mus musculus expressed sequence AA388235 (AA388235), mRNA.					
Mus musculus	MEEBO	ILMN_194370	ILMN_194370	2610318M16RIK	scl46635.1.1_84						2610318M16Rik		ILMN_2505809	006860132	S	20	AACATTGCTGATCCCTCCAGTGGGAAGACCTACTGTCATCACCTCCGGCA										
Mus musculus	RefSeq	ILMN_220692	ILMN_220692	DNAJB2	NM_178055.3	NM_178055.3		56812	142388493	NM_178055.3	Dnajb2	NP_835156.1	ILMN_2725428	003800463	S	1744	GGAGCAGGCTATGGCCGGCCTCTGTTAACACTGAGCCTTTGAGACCCATC	1	+	75242154-75242203	1qC3	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 2 (Dnajb2), transcript variant 2, mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	MGC113758; mDj8; 2700059H22Rik; Hsj1	MGC113758; mDj8; 2700059H22Rik; Hsj1
Mus musculus	MEEBO	ILMN_195658	ILMN_195658	SCL0003936.1_5	scl0003936.1_5						scl0003936.1_5		ILMN_2517522	002470446	S	3	AGGTTGATGCTGACACCAAGGCTGGGCGGAAGGGCAAAGAGCTGGATGAC										
Mus musculus	RefSeq	ILMN_199437	ILMN_199437	MRGPRA8	NM_207536.1	NM_207536.1		404237	46430527	NM_207536.1	Mrgpra8	NP_997419.1	ILMN_1256455	006770400	S	819	GCAACAGACCCTCAAAATGTTTCTCCAGAGAGCACTGCAGGACACCCCTG					Mus musculus MAS-related GPR, member A8 (Mrgpra8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgA8	MrgA8
Mus musculus	RefSeq	ILMN_199437	ILMN_199437	MRGPRA8	NM_207536.1	NM_207536.1		404237	46430527	NM_207536.1	Mrgpra8	NP_997419.1	ILMN_2941599	001110059	S	2	TGGACAAAACCATCCTTGGAAGTATTGACATCGAGACCCTGATCCGACAT					Mus musculus MAS-related GPR, member A8 (Mrgpra8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgA8	MrgA8
Mus musculus	MEEBO	ILMN_186874	ILMN_186874	CSMD1	scl321.1.1_325				16716456	NM_053171	Csmd1		ILMN_2503552	005290066	S	10	CTTCTCCTGAATATTAACTACTCATTTGTCTTTAACATGTAAGTGTTGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_206715	ILMN_206715	A630061A17RIK	ri|A630061A17|PX00147A01|AK080346|823					AK080346	A630061A17Rik		ILMN_1237783	002680681	S	548	CTGGGTCACATGGTAGAGTAGACAGAGAAGACAAAGCAGTCTTCCTCATG										
Mus musculus	RefSeq	ILMN_185490	ILMN_240214	NPC1	NM_008720.2	NM_008720.2		18145	89242145	NM_008720.2	Npc1	NP_032746.2	ILMN_2427454	002140253	S	5123	GCAGCTGGTTATGGCCCGGGAAGACAGGATGCAGACAACGCTCATGGGTT	18	-	12348239-12348288	18qA1	Mus musculus Niemann Pick type C1 (Npc1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IEA]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence IMP]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IMP]	Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C85354; A430089E03Rik; D18Ertd139e; lcsd; spm; nmf164; D18Ertd723e	C85354; A430089E03Rik; D18Ertd139e; lcsd; spm; nmf164; D18Ertd723e
Mus musculus	RefSeq	ILMN_194865	ILMN_240214	NPC1	NM_008720.2	NM_008720.2		18145	89242145	NM_008720.2	Npc1	NP_032746.2	ILMN_1247075	006980292	S	5031	GGCCTCATTAGAGCTTGTTCTCCAAAAACCTGCTTGAAAAAGGCAACGTG	18	-	12348331-12348380	18qA1	Mus musculus Niemann Pick type C1 (Npc1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IEA]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence IMP]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IMP]	Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C85354; A430089E03Rik; D18Ertd139e; lcsd; spm; nmf164; D18Ertd723e	C85354; A430089E03Rik; D18Ertd139e; lcsd; spm; nmf164; D18Ertd723e
Mus musculus	RefSeq	ILMN_211381	ILMN_240214	NPC1	NM_008720.2	NM_008720.2		18145	89242145	NM_008720.2	Npc1	NP_032746.2	ILMN_1250418	007210408	S	5080	CACGTTGCCTTTTTCAAGCAGGTTTTTGGAGAACAAGCTCTAATGAGGCC	18	-	12348282-12348331	18qA1	Mus musculus Niemann Pick type C1 (Npc1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IEA]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence IMP]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IMP]	Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C85354; A430089E03Rik; D18Ertd139e; lcsd; spm; nmf164; D18Ertd723e	C85354; A430089E03Rik; D18Ertd139e; lcsd; spm; nmf164; D18Ertd723e
Mus musculus	RefSeq	ILMN_199902	ILMN_199902	LOC384048	XM_357387.1	XM_357387.1			38078842	XM_357387.1	LOC384048		ILMN_2536898	007150152	S	1178	ACTGTGCCAAACAGTTATCAGGCGGTTGGTGGTTTAGCAACTGTGGTCGC										
Mus musculus	RefSeq	ILMN_222607	ILMN_222607	MRPS28	NM_025434.2	NM_025434.2		66230	31981287	NM_025434.2	Mrps28	NP_079710.2	ILMN_2752224	000580189	S	483	CCTGGGTGGGACCACAGATACAACTATACTGGAGGCTGATGCAGTTCTCT	3	-	8802301-8802350	3qA1	Mus musculus mitochondrial ribosomal protein S28 (Mrps28), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AW061224; 1500012D08Rik	AW061224; 1500012D08Rik
Mus musculus	Riken	ILMN_205958	ILMN_205958	C230049M14RIK	ri|C230049M14|PX00174H18|AK048760|2885					AK048760	C230049M14Rik		ILMN_1218567	007610010	S	2605	TGCACAATAAGGCCTGGCAGGCTGAAGGGCAGGCTGAGGAGTGTGCTGTT										
Mus musculus	Riken	ILMN_205602	ILMN_205602	B230342L12RIK	ri|B230342L12|PX00160G12|AK046112|2934					AK046112	B230342L12Rik		ILMN_1218211	000630008	S	2627	CTGAGACAAGAATCCCAGCATCAGCCTCTGGCTTGCATACATACGTGAGC										
Mus musculus	MEEBO	ILMN_195714	ILMN_195714	LTBP1	scl50491.36_175				46249418	NM_019919	Ltbp1		ILMN_2644746	001500524	S	1057	GGGCCCCCCTTGAGCAAGCAGCAAAACATACGTCAACCAAGAAGGCAGAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197373	ILMN_232275	EG620143	XM_884529.3	XM_884529.3		620143	149264366	XM_884529.3	EG620143	XP_889622.1	ILMN_1251097	000610487	S	241	GGCCTGGTACTGTGGCACTCCGTGAAATCAGAAGCTATCAGAAGTCCTCC	13	-	70146315-70146364	13qC1	PREDICTED: Mus musculus predicted gene, EG620143 (EG620143), mRNA.					
Mus musculus	RefSeq	ILMN_197443	ILMN_197443	LOC227995	XM_141286.2	XM_141286.2			38075863	XM_141286.2	LOC227995		ILMN_2528155	000780592	S	808	GGTGTCACTCAGGACTTTCAAGCTTCTGTCCTTCAGGTATTAGACTCCAC										
Mus musculus	RefSeq	ILMN_190449	ILMN_233076	LOC637047	XM_912638.2	XM_912638.2		637047	94377654	XM_912638.2	LOC637047	XP_917731.2	ILMN_1256666	000110377	S	26	TTATATTGTTGCTTTGGATTGTGGGAATCAGTGGTGACGTTGTGATGACC					PREDICTED: Mus musculus similar to Ig kappa chain V-II region RPMI 6410 precursor (LOC637047), mRNA.					
Mus musculus	MEEBO	ILMN_209927	ILMN_209927	EIF2B1	scl0003953.1_5	NM_145371.1			21703743	NM_145371.1	Eif2b1		ILMN_2600508	001260192	S	610	AGCAGATCTTGTCATAGTTGGTGCTGAAGGAGTGGTAGAGAACGGAGGCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]		
Mus musculus	Riken	ILMN_204943	ILMN_204943	D230046F09RIK	ri|D230046F09|PX00190H13|AK052106|1267					AK052106	D230046F09Rik		ILMN_1255302	006420451	S	1087	TATCAGTCCCCCAAAGTCAGCACTGGATCCTTGGCCTCACGCAGGAGTGG										
Mus musculus	RefSeq	ILMN_213189	ILMN_213189	PRRG2	NM_022999.1	NM_022999.1		65116	39930410	NM_022999.1	Prrg2	NP_075375.1	ILMN_1245984	004610474	S	870	CACGTGTTTCCGCCGGGCACGCATACACGCACGTCCCTGACCATCCTGTT	7	-	52309358-52309407	7qB4	Mus musculus proline-rich Gla (G-carboxyglutamic acid) polypeptide 2 (Prrg2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	2510041M06Rik; N4WBP1; 1600014G02Rik	2510041M06Rik; N4WBP1; 1600014G02Rik
Mus musculus	RefSeq	ILMN_224264	ILMN_313401	LOC666053	XR_032036.1	XR_032036.1		666053	149266925	XR_032036.1	LOC666053		ILMN_2777535	006900504	S	298	ACAGGAGCCTTACTGGAGATTTTACATTGTGCTATAGGGATTGTGTCATC				15qD3	PREDICTED: Mus musculus similar to protein tyrosine phosphatase-like protein PTPLB (LOC666053), misc RNA.					
Mus musculus	MEEBO	ILMN_185063	ILMN_185063	RAP1GA1	scl0002851.1_113				30354391	BC052065	Rap1ga1		ILMN_2423853	006520341	S	15	GCAGCGGCGACGATACCATGAGCGGCCGGAAGCGCAGCTTCACCTTCGGT										
Mus musculus	Riken	ILMN_203753	ILMN_203753	A130019A16RIK	ri|A130019A16|PX00121B23|AK037437|3679					AK037437	A130019A16Rik		ILMN_1254581	002340367	S	3512	GCCCAATCAGTCATCAGTGGGAGGAGAGGTCCTGTGAAGGTTCTATGTCC										
Mus musculus	RefSeq	ILMN_216635	ILMN_258685	LMOD2	NM_053098.2	NM_053098.2		93677	141801988	NM_053098.2	Lmod2	NP_444328.1	ILMN_1258528	002750475	S	1886	CTGGAATTCCAAAGGGAATTCTAAGATGCAATGAGCATGTTTCTTCTGTA	6	+	24555333-24555382	6qA3.1	Mus musculus leiomodin 2 (cardiac) (Lmod2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]	C-Lmod	C-Lmod
Mus musculus	RefSeq	ILMN_221831	ILMN_221831	1700054O13RIK	NM_026096.1	NM_026096.1		67334	13385599	NM_026096.1	1700054O13Rik	NP_080372.1	ILMN_1240442	000540201	S	487	GAACCATGAAGGCTAATAGCAGAGGAGGCTCCCCTGGTGTCCATGACTAC	X	+	9424559-9424608	XqA1.1	Mus musculus RIKEN cDNA 1700054O13 gene (1700054O13Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2al3; RP23-433D6.1	H2al3; RP23-433D6.1
Mus musculus	RefSeq	ILMN_198137	ILMN_322888	EG240055	NM_001081656.1	NM_001081656.1		240055	126116566	NM_001081656.1	EG240055	NP_001075125.1	ILMN_1228763	000270097	S	1309	GGGTCCTTCAGTGGCTCCCAGGATGACAGCGATTCAGACATGACCTTCGG	17	+	26578061-26578110	17qA3.3	Mus musculus predicted gene, EG240055 (EG240055), mRNA.				Neur2	Neur2
Mus musculus	MEEBO	ILMN_218886	ILMN_218886	4921522P10RIK	scl34099.2_242	NM_025726.1			21313359	NM_025726.1	4921522P10Rik		ILMN_1218156	005080735	S	1619	CTGGCCTGCTCTGGGGCTATTTCAAAAACCACTTTCTCCAGTAATTTCAC										
Mus musculus	RefSeq	ILMN_219184	ILMN_219184	EHMT2	NM_147151.1	NM_147151.1		110147	22219431	NM_147151.1	Ehmt2	NP_671493.1	ILMN_2705367	002060201	S	3534	CAGGCCGGGCACTGCCCTTCAGACATTTCTCCATCAGAGACCCCAGTAAG	17	+	35044281-35044330	17qB1	Mus musculus euchromatic histone lysine N-methyltransferase 2 (Ehmt2), transcript variant short, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IMP]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	NG36; Bat8; D17Ertd710e; G9a	NG36; Bat8; D17Ertd710e; G9a
Mus musculus	RefSeq	ILMN_219184	ILMN_219184	EHMT2	NM_147151.1	NM_147151.1		110147	22219431	NM_147151.1	Ehmt2	NP_671493.1	ILMN_3147724	001690706	A	3555	GACATTTCTCCATCAGAGACCCCAGTAAGGCCTGGAAGGTCGATGGCCCC	17	+	35044302-35044351	17qB1	Mus musculus euchromatic histone lysine N-methyltransferase 2 (Ehmt2), transcript variant short, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IMP]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	NG36; Bat8; D17Ertd710e; G9a	NG36; Bat8; D17Ertd710e; G9a
Mus musculus	RefSeq	ILMN_196969	ILMN_235502	TMEM90A	NM_001033334.2	NM_001033334.2		627191	133892742	NM_001033334.2	Tmem90a	NP_001028506.1	ILMN_1250759	005960129	S	988	TGTGGGGGCCGGTCTCTATGTGGCTGTGGTGGTAGCTCTGGCTGCTTACA	12	-	86019689-86019738	12qD1	Mus musculus transmembrane protein 90a (Tmem90a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm261	Gm261
Mus musculus	RefSeq	ILMN_184794	ILMN_225020	UNC13A	NM_001029873.1	NM_001029873.1		382018	71274169	NM_001029873.1	Unc13a	NP_001025044.1	ILMN_2421623	005090112	S	1134	TGACCGGGACAGTGACTATAGGAGTGAGACCAGCAACAGCATCCCACCGC	8	-	74184473-74184522	8qB3.3	Mus musculus unc-13 homolog A (C. elegans) (Unc13a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IMP]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IDA]	Munc13-1; C630025L14; 2410078G03Rik	Munc13-1; C630025L14; 2410078G03Rik
Mus musculus	RefSeq	ILMN_201129	ILMN_225020	UNC13A	NM_001029873.1	NM_001029873.1		382018	71274169	NM_001029873.1	Unc13a	NP_001025044.1	ILMN_1251474	007550241	S	4305	CAGACAGATGGGTGACATCCTGAGCCAGGTGAAGGGCACAGGCAATGTAC	8	-	74165330-74165379	8qB3.3	Mus musculus unc-13 homolog A (C. elegans) (Unc13a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IMP]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IDA]	Munc13-1; C630025L14; 2410078G03Rik	Munc13-1; C630025L14; 2410078G03Rik
Mus musculus	RefSeq	ILMN_198881	ILMN_251846	BC049349	XM_904244.3	XM_904244.3		234413	149259136	XM_904244.3	BC049349	XP_909337.3	ILMN_1213324	004920605	S	957	TGGCCACTGTGCCAGAAGACATTTAGGGACTCACAGTGGAGCCTGGCCTT				8qB3.3	PREDICTED: Mus musculus cDNA sequence BC049349, transcript variant 1 (BC049349), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_236087	ILMN_236087	RPS19	NM_023133.1	NM_023133.1		20085	12963510	NM_023133.1	Rps19	NP_075622.1	ILMN_2862280	006280541	S	412	GGTGTCAGACCCAGCCATTTCAGCAGAGGCTCTAAGAGTGTGGCCCGCCG	7	+	25673384-25673433	7qA3	Mus musculus ribosomal protein S19 (Rps19), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC107694	MGC107694
Mus musculus	RefSeq	ILMN_189441	ILMN_236087	RPS19	NM_023133.1	NM_023133.1		20085	12963510	NM_023133.1	Rps19	NP_075622.1	ILMN_2754355	003840465	S	40	AAGCCCGGCGCGGGGTCGCTCCGCCCTCTGGAGCCGCGGCCACGTGCGAG	7	+	25669772-25669821	7qA3	Mus musculus ribosomal protein S19 (Rps19), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC107694	MGC107694
Mus musculus	RefSeq	ILMN_212912	ILMN_212912	DSG1B	NM_181682.1	NM_181682.1		225256	32129200	NM_181682.1	Dsg1b	NP_859010.1	ILMN_2631568	000360465	S	1710	AGTTAACAACACTCCCGGTAGGCAAAATCCCTTAGACGAACCGGAACCCG	18	+	20558011-20558060	18qA2	Mus musculus desmoglein 1 beta (Dsg1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Dsg5	Dsg5
Mus musculus	RefSeq	ILMN_212912	ILMN_212912	DSG1B	NM_181682.1	NM_181682.1		225256	32129200	NM_181682.1	Dsg1b	NP_859010.1	ILMN_2631569	002360768	S	1712	GTTAACAACACTCCCGGTAGGCAAAATCCCTTAGACGAACCGGAACCCGA	18	+	20558013-20558062	18qA2	Mus musculus desmoglein 1 beta (Dsg1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Dsg5	Dsg5
Mus musculus	RefSeq	ILMN_212912	ILMN_212912	DSG1B	NM_181682.1	NM_181682.1		225256	32129200	NM_181682.1	Dsg1b	NP_859010.1	ILMN_2751822	006510068	S	3295	GAGTATTGTTCACTACCATCTCAGTGACTTACATCCAACTCCTCCCCACC	18	+	20568133-20568182	18qA2	Mus musculus desmoglein 1 beta (Dsg1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Dsg5	Dsg5
Mus musculus	RefSeq	ILMN_199284	ILMN_201282	GM1153	XM_356464.4	XM_356464.4		382364	83007543	XM_356464.4	Gm1153	XP_356464.3	ILMN_1223934	002680563	S	1175	CCCCCATTGTCCTGCAGCTTCAGGGGTCCCATTGGGAGAGGATGCAAACT	8	+	57978558-57978607	8qB2	PREDICTED: Mus musculus gene model 1153, (NCBI) (Gm1153), mRNA.					
Mus musculus	RefSeq	ILMN_216310	ILMN_216310	ELAVL1	NM_010485.3	NM_010485.3		15568	134032046	NM_010485.3	Elavl1	NP_034615.2	ILMN_1226834	001470204	S	2326	TTAAGGATTAACCCTCAAAGTTCTCTTCATAACTGCCTTGACGTTTGGGG	8	-	4288436-4288485	8qA1.1	Mus musculus ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) (Elavl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules [goid 48255] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	HUR; 2410055N02Rik; W91709; Hua	HUR; 2410055N02Rik; W91709; Hua
Mus musculus	RefSeq	ILMN_209399	ILMN_209399	JRK	NM_008415.3	NM_008415.3		16469	31543011	NM_008415.3	Jrk	NP_032441.3	ILMN_1234831	001470086	S	5086	GTTCCAAAGATTGTAACCCCCAGCTCGCAGAGAGGCTTAGGTTTCAGGGG	15	-	74530035-74530084	15qD3	Mus musculus jerky (Jrk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212308	ILMN_212308	S100G	NM_009789.2	NM_009789.2		12309	83816950	NM_009789.2	S100g	NP_033919.1	ILMN_1249485	001070050	S	262	GAGCTGGATAAGAATGGCGATGGAGAAGTTAGTTACGAAGAATTCGAAGC	X	-	159400092-159400141	XqF4	Mus musculus S100 calcium binding protein G (S100g), mRNA.	The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 5499] [evidence IEA]	Calb3; CABP1; AU042539; Cabp9k; CaBP-D9K	Calb3; CABP1; AU042539; Cabp9k; CaBP-D9K
Mus musculus	RefSeq	ILMN_209884	ILMN_230802	D10627	NM_001013379.2	NM_001013379.2		234358	110681697	NM_001013379.2	D10627	NP_001013397.2	ILMN_2600127	001070056	S	1375	CCCAGCAGTCTCCAAATGCATAAAAGAACACATAATGGAGAGAAACTCGA	8	+	71752817-71752866	8qB3.3	Mus musculus cDNA sequence D10627 (D10627), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_230802	ILMN_230802	D10627	NM_001013379.2	NM_001013379.2		234358	110681697	NM_001013379.2	D10627	NP_001013397.2	ILMN_2912111	004640242	S	1344	ATGTAATCAGTGTGGTAAAGCCTTTTCGGAACCCAGCAGTCTCCAAATGC	8	+	71752786-71752835	8qB3.3	Mus musculus cDNA sequence D10627 (D10627), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_224228	ILMN_224228	4930429O20RIK	scl17475.2.1_264				21312825	NM_029025	4930429O20Rik		ILMN_1252531	000620152	S	1631	CTCCACCTCTCTGAACAGTGTATTGACCAGAATGTACTAATCGCAGCCTT										
Mus musculus	RefSeq	ILMN_191187	ILMN_257427	SULF2	NM_028072.4	NM_028072.4		72043	141801751	NM_028072.4	Sulf2	NP_082348.2	ILMN_1234624	000630154	S	4547	CACTTAAGATGGTGTCATTCTTTACACCGCAAGGAATGGAAACCATTCGG				2qH3	Mus musculus sulfatase 2 (Sulf2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione [goid 6790] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [evidence ISO]; Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate [goid 8449] [evidence ISO]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]	mKIAA1247; 2010004N24Rik; AU020235	mKIAA1247; 2010004N24Rik; AU020235
Mus musculus	RefSeq	ILMN_211227	ILMN_257427	SULF2	NM_028072.4	NM_028072.4		72043	141801751	NM_028072.4	Sulf2	NP_082348.2	ILMN_1239293	007200739	S	3393	CACCACATACATGACCGCTCACACGTAACCAACACAGGGAATTGTAGGGG	2	-	165899719-165899768	2qH3	Mus musculus sulfatase 2 (Sulf2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione [goid 6790] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [evidence ISO]; Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate [goid 8449] [evidence ISO]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]	mKIAA1247; 2010004N24Rik; AU020235	mKIAA1247; 2010004N24Rik; AU020235
Mus musculus	Riken	ILMN_203554	ILMN_203554	9330171J21RIK	ri|9330171J21|PX00106E08|AK034278|4097					AK034278	9330171J21Rik		ILMN_1222466	002100349	S	3764	GGTACCAAGCCCTGGAGAACCTGCCCTGAAAGCCAGGGTGCCATGTTCTA										
Mus musculus	RefSeq	ILMN_232177	ILMN_232177	GM525	NM_001033266.2	NM_001033266.2		217071	126366077	NM_001033266.2	Gm525	NP_001028438.1	ILMN_3137124	003130709	A	306	GAGGAGCAGTTTCTGGAGCACTGGCTGAATCCTCACTGCAAGCCGCACTG	11	+	88949909-88949958	11qC	Mus musculus gene model 525, (NCBI) (Gm525), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_232177	ILMN_232177	GM525	NM_001033266.2	NM_001033266.2		217071	126366077	NM_001033266.2	Gm525	NP_001028438.1	ILMN_3059859	005340747	I	456	GACCTGCCTTAGAAGAGGGAAGTGCATCACGTGGGGCTGCTGAGTTTCGG	11	+	88954253-88954302	11qC	Mus musculus gene model 525, (NCBI) (Gm525), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	Riken	ILMN_202412	ILMN_202412	1700020G18RIK	ri|1700020G18|ZX00037B17|AK006161|477					AK006161	1700020G18Rik		ILMN_1246434	000580296	S	1	CGACTCTTCCCACACTTGGCTCCATTGAGGGTATGTGCGTCCAGGCGGTG										
Mus musculus	RefSeq	ILMN_219836	ILMN_219836	RASL2-9	NM_009028.2	NM_009028.2		19428	114145657	NM_009028.2	Rasl2-9	NP_033054.1	ILMN_1229223	005050040	S	855	TTTGGACTTGCGTATTTAGCCCCCTGGAACAGAGTTGTTCTGGATTTCAA	7	-	5076648-5076697	7qA1	Mus musculus RAS-like, family 2, locus 9 (Rasl2-9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ran; Ran/M2; M2	Ran; Ran/M2; M2
Mus musculus	MEEBO	ILMN_190875	ILMN_190875	TRAV12D-3_X06305_T_CELL_RECEPTOR_ALPHA_VARIABLE_12D-3_20	TRAV12D-3_X06305_T_cell_receptor_alpha_variable_12D-3_20						TRAV12D-3_X06305_T_cell_receptor_alpha_variable_12D-3_20		ILMN_2474019	003800408	S	19	AATGCTCAGGAGGAGCAATGGCGATGGAGACTCCGTGACCCAGACAGAAG										
Mus musculus	RefSeq	ILMN_185965	ILMN_236212	CDH16	NM_007663.2	NM_007663.2		12556	142376412	NM_007663.2	Cdh16	NP_031689.1	ILMN_2670038	006220440	S	2775	CCTGAGCACCTACTTTATGGGATGACCATGGGAACACTCCAAATGGCAGC	8	-	107138082-107138131	8qD3	Mus musculus cadherin 16 (Cdh16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201483	ILMN_201483	LOC385241	XM_358141.1	XM_358141.1			38094097	XM_358141.1	LOC385241		ILMN_2542459	000110309	S	1	ATGTCGCAACTTCGGAGCTTGCCTGAGCTCCCTTCACAGCATCCAGCAGC										
Mus musculus	RefSeq	ILMN_219022	ILMN_219022	CD19	NM_009844.2	NM_009844.2		12478	146149172	NM_009844.2	Cd19	NP_033974.2	ILMN_1228448	006280037	S	1609	GGATAAGTCTGACGACCTAGAACCAGCATGGGAAGGAGAGGGCCACATGG				7qF3	Mus musculus CD19 antigen (Cd19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]		AW495831	AW495831
Mus musculus	RefSeq	ILMN_211976	ILMN_211976	CSF2RA	NM_009970.1	NM_009970.1		12982	6753533	NM_009970.1	Csf2ra	NP_034100.1	ILMN_2866276	005550437	S	1544	TGCCTCAGTTCCAGGGATGGCAGGGACAGCGTGCATATCCCCACCGTAAT	19	-	61300501-61300550	19qD3	Mus musculus colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) (Csf2ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	GM-CSFR; Csfgmra; CD116; GM-CSF-Ra	GM-CSFR; Csfgmra; CD116; GM-CSF-Ra
Mus musculus	RefSeq	ILMN_222778	ILMN_222778	B4GALT7	NM_146045.1	NM_146045.1		218271	22122526	NM_146045.1	B4galt7	NP_666157.1	ILMN_2754594	005220114	S	1437	AACACAAGCCCGGGTGAAGGAGCGGCTGATATAGCTGTAATTGGTGCCAC	13	+	55711156-55711205	13qB1	Mus musculus xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) (B4galt7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-galactose + O-beta-D-xylosylprotein = UDP + 4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 46525] [evidence IEA]	MGC28643	MGC28643
Mus musculus	Riken	ILMN_203314	ILMN_203314	MDM4	ri|C430044J17|PX00080O07|AK049576|2010					AK049576	Mdm4		ILMN_1252838	000150259	S	83	GAGCGACTCATGGAGCGGCCGTAAGTTTGCTAACTGTGGAGTCTTCACTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210149	ILMN_210149	6030490I01RIK	scl50060.4_2	NM_177359.2			31340711	NM_177359.2	6030490I01Rik		ILMN_2602719	004540192	S	4146	TATTGTAATTTCTCCTGTCATTATACTAAAAGATATATTGGCATTAGTGG										
Mus musculus	RefSeq	ILMN_186630	ILMN_186630	ZCCHC3	NM_175126.3	NM_175126.3		67917	34328413	NM_175126.3	Zcchc3	NP_780335.1	ILMN_2437173	000510435	S	1022	AACGAGACCGTGGACGTGGAGGACATCGTGACCTGGCTCAAGCGCCACTG	2	-	152239692-152239741	2qH1	Mus musculus zinc finger, CCHC domain containing 3 (Zcchc3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810406K24Rik	2810406K24Rik
Mus musculus	RefSeq	ILMN_186630	ILMN_186630	ZCCHC3	NM_175126.3	NM_175126.3		67917	34328413	NM_175126.3	Zcchc3	NP_780335.1	ILMN_1248465	006380082	S	1959	GCTGCTTCTCTGTGGTATCAGACTTTGTGAAAACAGTGTTGCTAGAAGTG	2	-	152238755-152238804	2qH1	Mus musculus zinc finger, CCHC domain containing 3 (Zcchc3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810406K24Rik	2810406K24Rik
Mus musculus	RefSeq	ILMN_186630	ILMN_186630	ZCCHC3	NM_175126.3	NM_175126.3		67917	34328413	NM_175126.3	Zcchc3	NP_780335.1	ILMN_2951955	001850661	S	1789	AAGGTTTTAGCCCTTTGGGCCGCCTTGGTCATTATGCCTCCAGCCCAGGG	2	-	152238925-152238974	2qH1	Mus musculus zinc finger, CCHC domain containing 3 (Zcchc3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810406K24Rik	2810406K24Rik
Mus musculus	Riken	ILMN_204167	ILMN_204167	TNFSF13B	ri|C730042F04|PX00087P04|AK050384|1128					AK050384	Tnfsf13b		ILMN_1219140	000270193	S	1026	GTTGGATGCCTTTCCTCCGGTTCACTTTGTATGCTGGCTGCTGTAGCTGG						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that activates or increases the frequency, rate, or extent of germinal center formation [goid 2636] [evidence IMP]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence IGI]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the B cell receptor to augment B cell activation [goid 31296] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222920	ILMN_222920	GMFB	NM_022023.1	NM_022023.1		63985	11993947	NM_022023.1	Gmfb	NP_071306.1	ILMN_2756771	007610669	S	3875	CGGAATATTATTACTTGAATACCACTTGAGATCATTAGCATGCCAGGAAA	14	-	47428037-47428086	14qC1	Mus musculus glia maturation factor, beta (Gmfb), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	3110001O16Rik; 3110001H22Rik; C79176; AI851627; D14Ertd630e	3110001O16Rik; 3110001H22Rik; C79176; AI851627; D14Ertd630e
Mus musculus	Riken	ILMN_204222	ILMN_204222	UTY	ri|A730061A15|PX00151B17|AK043154|2149					AK043154	Uty		ILMN_2563323	002060411	S	856	TTCCTTGGAAGGGAAAGTGCTCAGAGGTCAGACCTGCCTCCTGGCTGAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211777	ILMN_211777	MID1	scl0017318.2_177	NM_010797.1			6754691	NM_010797.1	Mid1		ILMN_2619452	000630519	S	2453	CCTGCTTCAGAAATTACTCACAGTCATCCCCCTGCCTCAGAATATCACTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IGI]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204652	ILMN_204652	8030481M12RIK	ri|8030481M12|PX00103J19|AK033272|2684					AK033272	8030481M12Rik		ILMN_1216586	000130452	S	2445	AATAATTTTTTATTTTTATTTTATATATTTTTTCATTAGGACCATATCTC										
Mus musculus	MEEBO	ILMN_186210	ILMN_186210	E230017H14RIK	scl0319663.1_30						E230017H14Rik		ILMN_2433570	003170324	S	10	ATCAATAACTATAATTTCCCTCCCAACATTTGAGTAATTTAATAGCAACT										
Mus musculus	Riken	ILMN_205964	ILMN_205964	C230071H21RIK	ri|C230071H21|PX00176K02|AK048807|1654					AK048807	C230071H21Rik		ILMN_1226029	002810341	S	1378	CAGAGTGGCTTCCCCACAGTATATGGCTGGCAGATGTCATAATCAGAAGG										
Mus musculus	RefSeq	ILMN_216974	ILMN_216974	FBXO38	NM_134136.2	NM_134136.2		107035	141803457	NM_134136.2	Fbxo38	NP_598897.1	ILMN_1217700	002810170	S	3762	GAGTCTCTACACAGGAACCTTGGGCTTGGAATTGGGAGGCCCTGGCTCAG	18	-	62664270-62664319	18qE1	Mus musculus F-box protein 38 (Fbxo38), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AU044865; 6030410I24Rik; Moka; SP329; AW214031	AU044865; 6030410I24Rik; Moka; SP329; AW214031
Mus musculus	Riken	ILMN_206604	ILMN_206604	E030026A10RIK	ri|E030026A10|PX00206E09|AK087089|2381					AK087089	E030026A10Rik		ILMN_1220720	007150743	S	2186	TAACCAAATAGTCCCAGGCTAAAAGCAGCCCAGCTGCATGCTCGGGAGCC										
Mus musculus	RefSeq	ILMN_208916	ILMN_208916	UNC119B	NM_175352.4	NM_175352.4		106840	146198546	NM_175352.4	Unc119b	NP_780561.1	ILMN_2590771	005270603	S	2252	CGGAGGCTTCGGGACTGGGAAACCTAGTTATCCTTCATGCTGCACTGCGT				5qF	Mus musculus unc-119 homolog B (C. elegans) (Unc119b), mRNA.				AI414892; AA407659	AI414892; AA407659
Mus musculus	RefSeq	ILMN_208916	ILMN_208916	UNC119B	NM_175352.4	NM_175352.4		106840	146198546	NM_175352.4	Unc119b	NP_780561.1	ILMN_1214441	003180703	S	2262	GGGACTGGGAAACCTAGTTATCCTTCATGCTGCACTGCGTTTACCCACTG				5qF	Mus musculus unc-119 homolog B (C. elegans) (Unc119b), mRNA.				AI414892; AA407659	AI414892; AA407659
Mus musculus	RefSeq	ILMN_208916	ILMN_208916	UNC119B	NM_175352.4	NM_175352.4		106840	146198546	NM_175352.4	Unc119b	NP_780561.1	ILMN_1245813	006550392	S	3311	GGCCCTGGGCATCTGATTTCCAGTTCCTAGGGACAGCATTTTGCTGTGTC				5qF	Mus musculus unc-119 homolog B (C. elegans) (Unc119b), mRNA.				AI414892; AA407659	AI414892; AA407659
Mus musculus	RefSeq	ILMN_214799	ILMN_214799	1110006G06RIK	NM_028661.1	NM_028661.1		73833	21312031	NM_028661.1	1110006G06Rik	NP_082937.1	ILMN_2868927	004640743	S	632	TCCTGAAGCGCCTTGACCTCACAACATCTGCTTTCCACTGGGGTGACCGG	7	-	28863182-28863231	7qB1	Mus musculus RIKEN cDNA 1110006G06 gene (1110006G06Rik), mRNA.				B230110F21Rik; AV026483; AI836081	B230110F21Rik; AV026483; AI836081
Mus musculus	RefSeq	ILMN_252216	ILMN_252216	3110043J09RIK	NM_028455.1	NM_028455.1		73167	21312154	NM_028455.1	3110043J09Rik	NP_082731.1	ILMN_2844671	007560414	S	1247	GAGCACACCCGGGATACTGTGGAAGTACAGCAGGCTGGCCCTGTTACCAA	15	+	84599731-84599780	15qE2	Mus musculus RIKEN cDNA 3110043J09 gene (3110043J09Rik), mRNA.				AI430858	AI430858
Mus musculus	MEEBO	ILMN_186171	ILMN_186171	5730458M16RIK	scl20881.1.1108_30						5730458M16Rik		ILMN_2433228	007650687	S	19	TTTAAAATTTGAATGTTACTTACCTGATAAATACTTCTTGTCATATGGGA										
Mus musculus	Riken	ILMN_206576	ILMN_206576	D230040M23RIK	ri|D230040M23|PX00190A20|AK084416|564					AK084416	D230040M23Rik		ILMN_1244229	003780477	S	367	CTAGGCACAAAATGTCCAGGAAATCTGGGACACTGTGAAAAGACCAGATC										
Mus musculus	RefSeq	ILMN_219465	ILMN_219465	ABR	NM_198895.1	NM_198895.1		109934	38683821	NM_198895.1	Abr	NP_942598.1	ILMN_1240953	003990520	S	209	CTTCCTCCTTTGTTGTGCGATGAGGGTCCGGTTTCCCATCTGACCAAGGA	11	-	76384618-76384667	11qB5	Mus musculus active BCR-related gene (Abr), transcript variant 3, mRNA.		The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	AU042359; 6330400K15Rik	AU042359; 6330400K15Rik
Mus musculus	RefSeq	ILMN_258154	ILMN_258154	OLFR119	NM_001011830.1	NM_001011830.1		258095	58801423	NM_001011830.1	Olfr119	NP_001011830.1	ILMN_2975019	004210332	S	386	GCATGGCCATATGCTCCCCACTTCACTATCCAACACGAATGAGTAGTGGG	17	+	37838002-37838051	17qB1	Mus musculus olfactory receptor 119 (Olfr119), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR263-7	MOR263-7
Mus musculus	RefSeq	ILMN_218967	ILMN_245403	TTC32	NM_029321.2	NM_029321.2		75516	118130580	NM_029321.2	Ttc32	NP_083597.1	ILMN_2702499	005050170	S	463	GACAAAGAAGAAAAGCAAAGACGAAATGCCGAGAAAAGTTACTGAAACCT	12	+	9042663-9042707:9042708-9042712	12qA1.1	Mus musculus tetratricopeptide repeat domain 32 (Ttc32), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1700013G20Rik	1700013G20Rik
Mus musculus	RefSeq	ILMN_212016	ILMN_212016	RAP1B	NM_024457.2	NM_024457.2		215449	117676385	NM_024457.2	Rap1b	NP_077777.1	ILMN_1229741	003170292	S	1795	GCATAAATGTTTGGGTGTAAAGATTGTGTGTCCATCCAACAGGGAGCCAC	10	-	117251745-117251794	10qD2	Mus musculus RAS related protein 1b (Rap1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IPI]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810443E11Rik	2810443E11Rik
Mus musculus	RefSeq	ILMN_215979	ILMN_215979	RNF168	NM_027355.1	NM_027355.1		70238	33859693	NM_027355.1	Rnf168	NP_081631.1	ILMN_2665959	003870102	S	3447	CCTGGAACTGAATGGGTAATCAGAAACTGGGTCCAACATGGACTTCAGGC	16	+	32300535-32300584	16qB2	Mus musculus ring fnger protein 168 (Rnf168), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	3110001H15Rik	3110001H15Rik
Mus musculus	MEEBO	ILMN_189419	ILMN_189419	5430440L12RIK	scl53468.1.1_230						5430440L12Rik		ILMN_2461088	002350326	S	6	GCAGCCAGTGGGTGAGAAAAATGTGATGAGGGAATTTGGACCCTGTGAAG										
Mus musculus	RefSeq	ILMN_192704	ILMN_192704	TREM2	NM_031254.2	NM_031254.2		83433	31981415	NM_031254.2	Trem2	NP_112544.1	ILMN_2992709	006770114	S	917	CCCCTCCTCCACCAAGACTTCTGTTTCTGCTACTTTTGCTTCAGAGGCCG	17	+	48491427-48491476	17qC	Mus musculus triggering receptor expressed on myeloid cells 2 (Trem2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISS]	Trem2a; Trem2c; Trem2b	Trem2a; Trem2c; Trem2b
Mus musculus	RefSeq	ILMN_213226	ILMN_213226	FBP2	NM_007994.3	NM_007994.3		14120	142371961	NM_007994.3	Fbp2	NP_032020.2	ILMN_2634905	003610347	S	1204	GGTCAGAACAGCGCCCTGCTGCTAAGGACAGGGTTAGAAGCCAGGGGTAA	13	-	62938285-62938334	13qB3	Mus musculus fructose bisphosphatase 2 (Fbp2), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 42132] [evidence IEA]; Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3 [goid 42578] [evidence IEA]	Fbp1; Rae-30; Fbp-1	Fbp1; Rae-30; Fbp-1
Mus musculus	RefSeq	ILMN_211378	ILMN_237731	OLFR1113	NM_207565.1	NM_207565.1		404327	46430589	NM_207565.1	Olfr1113	NP_997448.1	ILMN_2615222	004590053	S	848	AGGGGACAGACAAACTTCTCTCTCTGTTTTACACCATTTTGACTCCAATG	2	+	87053898-87053947	2qD	Mus musculus olfactory receptor 1113 (Olfr1113), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR264-25	MOR264-25
Mus musculus	RefSeq	ILMN_237731	ILMN_237731	OLFR1113	NM_207565.1	NM_207565.1		404327	46430589	NM_207565.1	Olfr1113	NP_997448.1	ILMN_2892716	003460441	S	350	GTCTATTCCTGATCCTGGGGGCTACTGAATGCTTCCTCCTGGCTGTGATG	2	+	87053400-87053449	2qD	Mus musculus olfactory receptor 1113 (Olfr1113), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR264-25	MOR264-25
Mus musculus	RefSeq	ILMN_197920	ILMN_197920	LOC231118	XM_144267.2	XM_144267.2			38079663	XM_144267.2	LOC231118		ILMN_1215346	004490593	S	1292	GAGGACCCAAGGCGAGCATGGGCGTCTCTTTTCTAAGGTTTCAGTCGTTG										
Mus musculus	RefSeq	ILMN_199622	ILMN_199622	LOC383750	XM_357223.1	XM_357223.1			38075299	XM_357223.1	LOC383750		ILMN_1212729	003800646	S	1369	GATGTGGACCCAGTGATGGATTTGCTAGCCCTGTACCAAGGACACCTCAC										
Mus musculus	Riken	ILMN_202227	ILMN_202227	PTBP2	ri|4930402N24|PX00029C06|AK015056|390					AK015056	Ptbp2		ILMN_1246504	003120630	S	1	GAATTTCCGTCGGGCCCTGGCCGCCATTTTCTCGCCGCTTGTGTGGCTCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]		
Mus musculus	Riken	ILMN_205492	ILMN_205492	AKAP10	ri|D030060F13|PX00181I05|AK051044|2015					AK051044	Akap10		ILMN_2572969	004120239	S	1667	AGGAAGCCAGGCATTGTGGCCTACCTTTAATCTCAGCACTCAAGAGACCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISS]		
Mus musculus	RefSeq	ILMN_187550	ILMN_249971	TIMM9	NM_013896.3	NM_013896.3		30056	67846097	NM_013896.3	Timm9	NP_038924.1	ILMN_1217794	002320296	S	846	GGTAAGATGCGGTGGTGTTGAGGCCTTAAGATTCGTCTGCGTGGTCACCG	12	-	72224282-72224331	12qC3	Mus musculus translocase of inner mitochondrial membrane 9 homolog (yeast) (Timm9), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Timm10; 2810011L15Rik; Tim10a	Timm10; 2810011L15Rik; Tim10a
Mus musculus	RefSeq	ILMN_187550	ILMN_249971	TIMM9	NM_013896.3	NM_013896.3		30056	67846097	NM_013896.3	Timm9	NP_038924.1	ILMN_1248569	000610075	S	274	CACTGAAGACAAGCAGAAGGCGGGGCACTTGCTTTTCCAGAGCAGAAAAG	12	-	72233007-72233056	12qC3	Mus musculus translocase of inner mitochondrial membrane 9 homolog (yeast) (Timm9), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Timm10; 2810011L15Rik; Tim10a	Timm10; 2810011L15Rik; Tim10a
Mus musculus	RefSeq	ILMN_222226	ILMN_222226	GOLGA5	NM_013747.4	NM_013747.4		27277	153791403	NM_013747.4	Golga5	NP_038775.1	ILMN_1250865	001500750	S	2253	CTCACCAGAAATGCACCATGACCAACCGTACGGCAAGTGAACAGAGCCAC				12qE	Mus musculus golgi autoantigen, golgin subfamily a, 5 (Golga5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ret-II; MGC102087	Ret-II; MGC102087
Mus musculus	RefSeq	ILMN_258103	ILMN_258103	ASCC2	NM_029291.1	NM_029291.1		75452	20270207	NM_029291.1	Ascc2	NP_083567.1	ILMN_2930922	003170497	S	2275	GCAAAGGCATGATTCCATCCTGAGACCACAAGCTGCCTGGACGAGGGACG	11	+	4583059-4583081:4583082-4583108	11qA1	Mus musculus activating signal cointegrator 1 complex subunit 2 (Ascc2), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		ASC1p100; 2610034L15Rik; RP23-280J3.3; AI482016; AW046480; 1700011I11Rik; FLJ21588	ASC1p100; 2610034L15Rik; RP23-280J3.3; AI482016; AW046480; 1700011I11Rik; FLJ21588
Mus musculus	RefSeq	ILMN_190399	ILMN_258103	ASCC2	NM_029291.1	NM_029291.1		75452	20270207	NM_029291.1	Ascc2	NP_083567.1	ILMN_1241675	007150128	S	2530	GTCCTGGATGGCAGGAGACCTGTATATTCAGAAGCAACGAAAGGCCCATG	11	+	4583314-4583363	11qA1	Mus musculus activating signal cointegrator 1 complex subunit 2 (Ascc2), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		ASC1p100; 2610034L15Rik; RP23-280J3.3; AI482016; AW046480; 1700011I11Rik; FLJ21588	ASC1p100; 2610034L15Rik; RP23-280J3.3; AI482016; AW046480; 1700011I11Rik; FLJ21588
Mus musculus	RefSeq	ILMN_190399	ILMN_258103	ASCC2	NM_029291.1	NM_029291.1		75452	20270207	NM_029291.1	Ascc2	NP_083567.1	ILMN_1259619	002570519	S	53	AGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAAGACCCGAAGACAG	11	+	4540408-4540457	11qA1	Mus musculus activating signal cointegrator 1 complex subunit 2 (Ascc2), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		ASC1p100; 2610034L15Rik; RP23-280J3.3; AI482016; AW046480; 1700011I11Rik; FLJ21588	ASC1p100; 2610034L15Rik; RP23-280J3.3; AI482016; AW046480; 1700011I11Rik; FLJ21588
Mus musculus	RefSeq	ILMN_190399	ILMN_258103	ASCC2	NM_029291.1	NM_029291.1		75452	20270207	NM_029291.1	Ascc2	NP_083567.1	ILMN_2758249	005810477	S	194	CGCCCTAGTGGAGGAGTACCTGGAACGTGCCAACTTCGTAGCTAATGACC	11	+	4546630-4546679	11qA1	Mus musculus activating signal cointegrator 1 complex subunit 2 (Ascc2), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		ASC1p100; 2610034L15Rik; RP23-280J3.3; AI482016; AW046480; 1700011I11Rik; FLJ21588	ASC1p100; 2610034L15Rik; RP23-280J3.3; AI482016; AW046480; 1700011I11Rik; FLJ21588
Mus musculus	RefSeq	ILMN_190399	ILMN_258103	ASCC2	NM_029291.1	NM_029291.1		75452	20270207	NM_029291.1	Ascc2	NP_083567.1	ILMN_2751186	003420615	S	899	GATGGCAATTCCGGAATTGGAGTCTGCAATTAAGAAGAGGAGGCTTGAAG	11	+	4564250-4564299	11qA1	Mus musculus activating signal cointegrator 1 complex subunit 2 (Ascc2), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		ASC1p100; 2610034L15Rik; RP23-280J3.3; AI482016; AW046480; 1700011I11Rik; FLJ21588	ASC1p100; 2610034L15Rik; RP23-280J3.3; AI482016; AW046480; 1700011I11Rik; FLJ21588
Mus musculus	Riken	ILMN_205100	ILMN_205100	D830039C14RIK	ri|D830039C14|PX00199B06|AK052914|705					AK052914	D830039C14Rik		ILMN_1215958	007210465	S	515	GGCTGCCAGACAGATCAAGGATAGAGTCACAATGGCTTCAGCCTTTCGTC										
Mus musculus	RefSeq	ILMN_217622	ILMN_217622	TYMP	NM_138302.1	NM_138302.1		72962	19923856	NM_138302.1	Tymp	NP_612175.1	ILMN_2685565	000360092	S	1728	GCTGAGAAGGAACAGTGGCGCCAACAGCAGCGTACAGAGGCCCTGCGCCA	15	-	89202618-89202667	15qE3	Mus musculus thymidine phosphorylase (Tymp), mRNA.		The chemical reactions and pathways involving pyrimidine bases, 1,3-diazine, organic nitrogenous bases [goid 6206] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving any pyrimidine nucleoside, one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 6213] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor) [goid 16763] [evidence IEA]; Catalysis of the reaction: thymidine + phosphate = thymine + 2-deoxy-D-ribose 1-phosphate [goid 9032] [evidence IEA]; Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate. The name should be qualified in each instance by adding the name of the natural substrate, e.g. maltodextrin phosphorylase, starch phosphorylase, glycogen phosphorylase [goid 4645] [evidence TAS]	PDECGF; 2900072D10Rik; Pdgfec; PD-ECGF	PDECGF; 2900072D10Rik; Pdgfec; PD-ECGF
Mus musculus	RefSeq	ILMN_188786	ILMN_188786	TYK2	NM_018793.2	NM_018793.2		54721	133922606	NM_018793.2	Tyk2	NP_061263.2	ILMN_2455699	001990170	S	3390	TAGCCAAGGCTGTACCTGAAGGCCACGAGTACTACCGAGTGCGCGAGGAC	9	-	20912328-20912377	9qA3	Mus musculus tyrosine kinase 2 (Tyk2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 4718] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	JTK1	JTK1
Mus musculus	RefSeq	ILMN_227732	ILMN_227732	MAPT	NM_001038609.1	NM_001038609.1		17762	84370346	NM_001038609.1	Mapt	NP_001033698.1	ILMN_3034121	006020008	I	336	GAGACCTCCGATGCTAAGAGCACTCCAACTGCTGAAGACGTGACTGCGCC	11	+	104092913-104092921:104140040-104140052:104140053-104140080	11qE1	Mus musculus microtubule-associated protein tau (Mapt), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mtapt; AI413597; AW045860; Tau	Mtapt; AI413597; AW045860; Tau
Mus musculus	RefSeq	ILMN_191092	ILMN_227732	MAPT	NM_001038609.1	NM_001038609.1		17762	84370346	NM_001038609.1	Mapt	NP_001033698.1	ILMN_1254952	004050279	S	310	ATGATGGAGCGGAGGAACCAGGGTCGGAGACCTCCGATGCTAAGAGCACT	11	+	104092887-104092921:104140040-104140052:104140053-104140054	11qE1	Mus musculus microtubule-associated protein tau (Mapt), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mtapt; AI413597; AW045860; Tau	Mtapt; AI413597; AW045860; Tau
Mus musculus	RefSeq	ILMN_227732	ILMN_227732	MAPT	NM_001038609.1	NM_001038609.1		17762	84370346	NM_001038609.1	Mapt	NP_001033698.1	ILMN_3107817	001030204	A	5208	TGCAAGTCCCATGATTTCTTTGGTGATTTTGAGGGTGGGGGGAGGGACAC	11	+	104189049-104189098	11qE1	Mus musculus microtubule-associated protein tau (Mapt), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mtapt; AI413597; AW045860; Tau	Mtapt; AI413597; AW045860; Tau
Mus musculus	RefSeq	ILMN_222589	ILMN_222589	SYTL4	NM_013757.1	NM_013757.1		27359	7305098	NM_013757.1	Sytl4	NP_038785.1	ILMN_2751935	002600114	S	3605	GGATTGATCCTGTAATGGAAACATACCTGAGAGCCCAGGCTCAGACTTGT	X	-	130470993-130471042	XqE3	Mus musculus synaptotagmin-like 4 (Sytl4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IDA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]	Slp4; Gph	Slp4; Gph
Mus musculus	MEEBO	ILMN_194434	ILMN_194434	PHF8	scl54552.22_84				31343052	NM_177201	Phf8		ILMN_1235273	004490343	S	1	AACTCCCTCTTGATCTTTCAATGGCAGCTAATTGCTAGCACCCTCACCCC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194434	ILMN_194434	PHF8	scl54552.22_84				31343052	NM_177201	Phf8		ILMN_1215983	005910487	S	2802	TTGTTGATGTCACTTGCCCCCCCTAACTATATGTAATTCCCACAGATGGG								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212019	ILMN_212019	MYOG	NM_031189.1	NM_031189.1		17928	13654246	NM_031189.1	Myog	NP_112466.1	ILMN_2621812	001990450	S	780	TGTAGCAGGGGGCTTTTAAGTGGGGCTGTCCTGATGTCCAGAAAACAGCC	1	+	136188434-136188483	1qE4	Mus musculus myogenin (Myog), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence TAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence TAS]	myo; MYF4	myo; MYF4
Mus musculus	RefSeq	ILMN_212019	ILMN_212019	MYOG	NM_031189.1	NM_031189.1		17928	13654246	NM_031189.1	Myog	NP_112466.1	ILMN_2863674	003800500	S	1147	CTGCCCTGAGTTGAGAGAGAAGGGGGAGGAGCTATCCGGTTCCAAAGCCT	1	+	136188801-136188850	1qE4	Mus musculus myogenin (Myog), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence TAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence TAS]	myo; MYF4	myo; MYF4
Mus musculus	RefSeq	ILMN_210506	ILMN_210506	GCH1	NM_008102.3	NM_008102.3		14528	118130997	NM_008102.3	Gch1	NP_032128.1	ILMN_2606295	002320403	S	907	CGGCTGTTATCTGTCTCAGTCGTACATTCCAGTTTCAGTTGGTACACTTG	14	-	47775377-47775426	14qC1	Mus musculus GTP cyclohydrolase 1 (Gch1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IC ]; The chemical reactions and pathways resulting in the formation of aromatic compounds, any substance containing an aromatic carbon ring [goid 19438] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The process that modulates the force with which blood travels through the lungs. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 14916] [evidence IMP]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence ISO]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [evidence ISO]	GTP-CH; GTPCH; Gch	GTP-CH; GTPCH; Gch
Mus musculus	Riken	ILMN_206289	ILMN_206289	9630036G15RIK	ri|9630036G15|PX00116M20|AK079348|4109					AK079348	9630036G15Rik		ILMN_2579009	005490601	S	3929	TGTGCCTGGTGCCAGCTGAGTTAAGAAGAGGGCATTGGATCCCCTGGAAC										
Mus musculus	RefSeq	ILMN_213608	ILMN_213608	NOL3	NM_030152.4	NM_030152.4		78688	146149205	NM_030152.4	Nol3	NP_084428.1	ILMN_1237967	006590392	S	1392	GAGGGGCGTGGGGTCTAACCAGTCACAGACATACACAAGGAGCTCTGCAC				8qD3	Mus musculus nucleolar protein 3 (apoptosis repressor with CARD domain) (Nol3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The cytoplasm of a muscle fiber; includes the sarcoplasmic reticulum [goid 16528] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B430311C09Rik; ARC; NOP; Nop30; MYC	B430311C09Rik; ARC; NOP; Nop30; MYC
Mus musculus	RefSeq	ILMN_186587	ILMN_213608	NOL3	NM_030152.4	NM_030152.4		78688	146149205	NM_030152.4	Nol3	NP_084428.1	ILMN_2436781	003120121	S	1439	GCAGAGCTCCTTGTGTATGTCTGTGACTGGTTAGACCCCACGCCCCTCAC				8qD3	Mus musculus nucleolar protein 3 (apoptosis repressor with CARD domain) (Nol3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The cytoplasm of a muscle fiber; includes the sarcoplasmic reticulum [goid 16528] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B430311C09Rik; ARC; NOP; Nop30; MYC	B430311C09Rik; ARC; NOP; Nop30; MYC
Mus musculus	RefSeq	ILMN_218745	ILMN_213608	NOL3	NM_030152.4	NM_030152.4		78688	146149205	NM_030152.4	Nol3	NP_084428.1	ILMN_2699704	005270541	S	1679	AGTGGTTAGGACAGGCGGGAGCAACCACAATCAAACCTACAGGGCAGGCC				8qD3	Mus musculus nucleolar protein 3 (apoptosis repressor with CARD domain) (Nol3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The cytoplasm of a muscle fiber; includes the sarcoplasmic reticulum [goid 16528] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B430311C09Rik; ARC; NOP; Nop30; MYC	B430311C09Rik; ARC; NOP; Nop30; MYC
Mus musculus	RefSeq	ILMN_193169	ILMN_213608	NOL3	NM_030152.4	NM_030152.4		78688	146149205	NM_030152.4	Nol3	NP_084428.1	ILMN_1260404	006660438	S	1447	AGATATGTGCAGAGCTCCTTGTGTATGTCTGTGACTGGTTAGACCCCACG				8qD3	Mus musculus nucleolar protein 3 (apoptosis repressor with CARD domain) (Nol3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The cytoplasm of a muscle fiber; includes the sarcoplasmic reticulum [goid 16528] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B430311C09Rik; ARC; NOP; Nop30; MYC	B430311C09Rik; ARC; NOP; Nop30; MYC
Mus musculus	RefSeq	ILMN_213608	ILMN_213608	NOL3	NM_030152.4	NM_030152.4		78688	146149205	NM_030152.4	Nol3	NP_084428.1	ILMN_2638889	000450148	S	2799	CTGGCCTCCCAAATGCCCCCAAGAAACACCTAGGCTATGGAACCATAAAG				8qD3	Mus musculus nucleolar protein 3 (apoptosis repressor with CARD domain) (Nol3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The cytoplasm of a muscle fiber; includes the sarcoplasmic reticulum [goid 16528] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B430311C09Rik; ARC; NOP; Nop30; MYC	B430311C09Rik; ARC; NOP; Nop30; MYC
Mus musculus	MEEBO	ILMN_191946	ILMN_191946	GRIK5	scl31642.18_0				6680092	NM_008168	Grik5		ILMN_2483633	002190053	S	7	TTCTATCCCGCACCGTGGACGGGAGGAGCGCAGAGACCGAGGACTCTAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane [goid 31630] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 15277] [evidence IGI]		
Mus musculus	RefSeq	ILMN_216206	ILMN_225979	KIF21B	NM_001039472.1	NM_001039472.1		16565	86990453	NM_001039472.1	Kif21b	NP_001034561.1	ILMN_1254763	004670100	S	9045	GTTCTGGAAATCGGATGTGTGTGTTCTAAGAGCTTGTCATAAATAAAACC	1	+	138074517-138074566	1qE4	Mus musculus kinesin family member 21B (Kif21b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	mKIAA0449; 2610511N21Rik; KIAA0449	mKIAA0449; 2610511N21Rik; KIAA0449
Mus musculus	RefSeq	ILMN_215399	ILMN_215399	PON3	NM_173006.1	NM_173006.1		269823	27370509	NM_173006.1	Pon3	NP_766594.1	ILMN_2867241	000160044	S	1728	CTACTAGTTAATAAACACTTAGTAAGCAGCCTCCAGCTGATGGGAACCAA	6	-	5170858-5170907	6qA1	Mus musculus paraoxonase 3 (Pon3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phenyl acetate + H2O = a phenol + acetate [goid 4064] [evidence IEA]	AI786302; 2810004E20	AI786302; 2810004E20
Mus musculus	RefSeq	ILMN_215399	ILMN_215399	PON3	NM_173006.1	NM_173006.1		269823	27370509	NM_173006.1	Pon3	NP_766594.1	ILMN_1244130	000610400	S	1027	GCTCATAGGTACTATATTTCACAAAGCTCTGTACTGTGACCTCTAGATCT	6	-	5171559-5171563:5171564-5171608	6qA1	Mus musculus paraoxonase 3 (Pon3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phenyl acetate + H2O = a phenol + acetate [goid 4064] [evidence IEA]	AI786302; 2810004E20	AI786302; 2810004E20
Mus musculus	RefSeq	ILMN_215399	ILMN_215399	PON3	NM_173006.1	NM_173006.1		269823	27370509	NM_173006.1	Pon3	NP_766594.1	ILMN_2659006	003460364	S	423	CTGTGGAGATATTTAAGTTTGAAGAACAACAACGCTCTCTCATCCACCTG	6	-	5186900-5186949	6qA1	Mus musculus paraoxonase 3 (Pon3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phenyl acetate + H2O = a phenol + acetate [goid 4064] [evidence IEA]	AI786302; 2810004E20	AI786302; 2810004E20
Mus musculus	RefSeq	ILMN_219434	ILMN_219434	OLFR1141	NM_146637.1	NM_146637.1		258630	33239179	NM_146637.1	Olfr1141	NP_666848.1	ILMN_1227279	000050634	S	618	TCAGTTGAGCACTATTTCAGAAGTCCTTGTCTCCTATTGCTCTATTATCT	2	-	87593481-87593530	2qD	Mus musculus olfactory receptor 1141 (Olfr1141), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR177-10	MOR177-10
Mus musculus	RefSeq	ILMN_235667	ILMN_235667	EG545391	NM_001034899.1	NM_001034899.1		545391	91064860	NM_001034899.1	EG545391	NP_001030071.1	ILMN_2959937	007100543	S	683	ACAGAAAAATATCAGTGTCGATAGTTGCTCCCATGAGCCTGTTGCTACCT				1qH4	Mus musculus predicted gene, EG545391 (EG545391), mRNA.					
Mus musculus	RefSeq	ILMN_212950	ILMN_212950	M6PR	NM_010749.6	NM_010749.6		17113	47087131	NM_010749.6	M6pr	NP_034879.2	ILMN_1238376	004590477	S	2039	ATGAAGTCATTCCTACTTCTCAATACCCTTGCAATGGCAGTGGAAATTTT	6	+	122267512-122267561	6qF1	Mus musculus mannose-6-phosphate receptor, cation dependent (M6pr), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A vacuole that is maintained at an acidic pH and which contains degradative enzymes, including a wide variety of acid hydrolases [goid 323] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mannose into, out of, within or between cells. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 15761] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of mannose from one side of the membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 15578] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IEA]	CD-MPR; Mpr46	CD-MPR; Mpr46
Mus musculus	RefSeq	ILMN_217228	ILMN_235108	GRM1	XM_976537.1	XM_976537.1		14816	94387847	XM_976537.1	Grm1	XP_981631.1	ILMN_1231948	005890754	S	3066	AGGCAGCCAGAATTCTCGCCCAGCAGCCAGTGTCCGTCGGCACATGTGCA				10qA1	PREDICTED: Mus musculus glutamate receptor, metabotropic 1, transcript variant 3 (Grm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence TAS]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence TAS]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43408] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]; Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 51930] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A G-protein coupled receptor that binds glutamate and is linked to the inositol 1,4,5-trisphosphate/calcium signaling system [goid 1639] [evidence TAS]		
Mus musculus	RefSeq	ILMN_235179	ILMN_235179	IVNS1ABP	NM_001039511.1	NM_001039511.1		117198	87239991	NM_001039511.1	Ivns1abp	NP_001034600.1	ILMN_3084087	000650168	A	2167	GGAACCCACTAGATGGACAGGCTGAGGTGTTTGGCAGTGATGATGACCAC	1	+	153203302-153203351	1qG2	Mus musculus influenza virus NS1A binding protein (Ivns1abp), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700126I16Rik; Nd1-L; 1190004M08Rik; Nd1-S; NS1-BP; NS-1; ND1; HSPC068; AA960440; mKIAA0850	1700126I16Rik; Nd1-L; 1190004M08Rik; Nd1-S; NS1-BP; NS-1; ND1; HSPC068; AA960440; mKIAA0850
Mus musculus	Riken	ILMN_205108	ILMN_205108	D830028D21RIK	ri|D830028D21|PX00200I01|AK052893|1747					AK052893	D830028D21Rik		ILMN_2570053	000510044	S	1400	TGGGCTAAGGCCAGCTTTGCTCTGTTGAGGTAACGTGGCAGCCTGGTTCT										
Mus musculus	RefSeq	ILMN_189973	ILMN_189973	TMPRSS2	NM_015775.2	NM_015775.2		50528	34328225	NM_015775.2	Tmprss2	NP_056590.2	ILMN_1223880	004070279	S	2929	ATGGTTACCACTCCATGTAAAGAAAACTCCCTCATGCGTCCTCTGGGACC	16	-	97786471-97786520	16qC4	Mus musculus transmembrane protease, serine 2 (Tmprss2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	MGC6821; D16Ertd61e	MGC6821; D16Ertd61e
Mus musculus	RefSeq	ILMN_223330	ILMN_311750	LOC100046032	XM_001475430.1	XM_001475430.1		100046032	149252194	XM_001475430.1	LOC100046032	XP_001475480.1	ILMN_1219223	004250041	S	1256	ATGTGTATGGGGGTAGTAGGGACACGCCACCACACCACGGGGTGCAGACG					PREDICTED: Mus musculus similar to brain-2 class III POU-domain protein (LOC100046032), mRNA.					
Mus musculus	RefSeq	ILMN_210662	ILMN_210662	KDELR2	NM_025841.1	NM_025841.1		66913	13385317	NM_025841.1	Kdelr2	NP_080117.1	ILMN_2761914	005820021	S	973	TTTATTACTATGTACAAAGATTTTTTTACACAAAGAAACTTAATGCTGTG				5qG2	Mus musculus KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 (Kdelr2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The retention in the endoplasmic reticulum (ER) lumen of soluble resident proteins. Sorting receptors retrieve proteins with ER localization signals, such as KDEL and HDEL sequences or some transmembrane domains, that have escaped to the cis-Golgi network and return them to the ER. Abnormally folded proteins and unassembled subunits are also selectively retained in the ER [goid 6621] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an endoplasmic reticulum (ER) retention sequence, a specific peptide sequence that ensures a protein is retained within the ER [goid 46923] [evidence IEA]	1110007A14Rik	1110007A14Rik
Mus musculus	RefSeq	ILMN_210638	ILMN_230698	LOC641240	XM_918601.3	XM_918601.3		641240	149274971	XM_918601.3	LOC641240	XP_923694.3	ILMN_2607675	000780315	S	216	CTGCTTCGAATTCCTGACTGCCAGTCTACCTGCCACTCCGACTCAGAGTC					PREDICTED: Mus musculus similar to MHC class II antigen beta chain (LOC641240), mRNA.					
Mus musculus	MEEBO	ILMN_222656	ILMN_222656	1700024B05RIK	scl0075518.1_130	NM_029322.1			21729776	NM_029322.1	1700024B05Rik		ILMN_1213312	005360491	S	709	CTGCTTGTAGAGCAGGCTGACCAAGGAGCATTCTTTGGTGAAGAAAAAAG										
Mus musculus	RefSeq	ILMN_212477	ILMN_212477	KCNK10	NM_029911.4	NM_029911.4		72258	146149097	NM_029911.4	Kcnk10	NP_084187.2	ILMN_1245193	001090594	S	674	GGGATCCCGCTTTTTGGTTTCTTATTGGCTGGAATTGGAGACCAACTTGG				12qE	Mus musculus potassium channel, subfamily K, member 10 (Kcnk10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Trek2; 1700024D23Rik; 3010005K24Rik	Trek2; 1700024D23Rik; 3010005K24Rik
Mus musculus	RefSeq	ILMN_215675	ILMN_215675	EBI3	NM_015766.2	NM_015766.2		50498	70906480	NM_015766.2	Ebi3	NP_056581.1	ILMN_2662322	002070537	S	960	GTCGTCTACTTGAGGGTGGCAGGGTGGCCTGTCCTGAGTCTGAATACTGA	17	+	56096234-56096283	17qD	Mus musculus Epstein-Barr virus induced gene 3 (Ebi3), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with the interleukin-27 receptor [goid 45523] [evidence IDA];  [goid 4896] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	IL-27	IL-27
Mus musculus	Riken	ILMN_205553	ILMN_205553	8430408J21RIK	ri|8430408J21|PX00024O22|AK033371|2703					AK033371	8430408J21Rik		ILMN_1213162	007330364	S	2406	GTTAATTCAAAGCCAGCAGGGCTAGGTGGGACTCTGTGGCAGCTGAGGGG										
Mus musculus	Riken	ILMN_202729	ILMN_202729	DNCIC2	ri|3110079H08|ZX00084D03|AK019441|186					AK019441	Dncic2		ILMN_2551827	007210750	S	4	TTGAGGGCTCCGCCCCAGGATGTGAGGTGTGGTTGTCCAGCTTTTGCCAA										
Mus musculus	MEEBO	ILMN_195180	ILMN_195180	MAPKBP1	scl20407.30.36_15				6754397	NM_011941	Mapkbp1		ILMN_1220220	003850368	S	4454	AGCTGTAAGACACCTTCGGCAGAGCAAAGTCACATCACCCGTCTCCTGAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC [goid 9401] [evidence IEA]; The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity in response to phosphorylation by a member of the JUN kinase kinase kinase (JNKKK) family, or another upstream kinase. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress [goid 7256] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_195180	ILMN_195180	MAPKBP1	scl20407.30.36_15				6754397	NM_011941	Mapkbp1		ILMN_2596133	004560400	S	4455	GCTGTAAGACACCTTCGGCAGAGCAAAGTCACATCACCCGTCTCCTGAGA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC [goid 9401] [evidence IEA]; The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity in response to phosphorylation by a member of the JUN kinase kinase kinase (JNKKK) family, or another upstream kinase. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress [goid 7256] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_214174	ILMN_327927	LOC100047659	XM_001479098.1	XM_001479098.1		100047659	149263732	XM_001479098.1	LOC100047659	XP_001479148.1	ILMN_2645133	001780053	S	2031	CCTCTTTTGGATTCTGGAGAGTTAGTCTGGGATGCCTAGACTTGTCCCCC					PREDICTED: Mus musculus hypothetical protein LOC100047659 (LOC100047659), mRNA.					
Mus musculus	RefSeq	ILMN_196443	ILMN_245461	SLC2A13	NM_001033633.2	NM_001033633.2		239606	141803063	NM_001033633.2	Slc2a13	NP_001028805.1	ILMN_1217954	001990278	S	2096	TTTAGTTACCGAAGTGAACGTGGCGGGAAGGCCAGCGGTTGGTCACTGCC	15	-	91102517-91102566	15qE3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 13 (Slc2a13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AI505012; A630029G22Rik; 6530403A04; Gm308	AI505012; A630029G22Rik; 6530403A04; Gm308
Mus musculus	RefSeq	ILMN_190115	ILMN_245461	SLC2A13	NM_001033633.2	NM_001033633.2		239606	141803063	NM_001033633.2	Slc2a13	NP_001028805.1	ILMN_2467292	003170465	S	6297	CCTGTGAAGACGGACTATCTCTCGGAAACTGCCACTGTCCCATTCTATCA	15	-	91098316-91098365	15qE3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 13 (Slc2a13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AI505012; A630029G22Rik; 6530403A04; Gm308	AI505012; A630029G22Rik; 6530403A04; Gm308
Mus musculus	RefSeq	ILMN_211117	ILMN_319336	LOC100045551	XM_001475248.1	XM_001475248.1		100045551	149262275	XM_001475248.1	LOC100045551	XP_001475298.1	ILMN_1214179	006250092	S	2604	CCTTGTCCCACTTACACTATGCAGTATCTCCTAACTTCAGTGCACTCTGC					PREDICTED: Mus musculus similar to Protein phosphatase 1D magnesium-dependent, delta (LOC100045551), mRNA.					
Mus musculus	RefSeq	ILMN_253848	ILMN_253848	OLFR1415	NM_001011525.1	NM_001011525.1		258228	58372123	NM_001011525.1	Olfr1415	NP_001011525.1	ILMN_3160276	003710446	S	882	CAAAGAGTTTAAGGATGCTGTGAAAAGGACCCTGGGTTTGGGTCACACTC	1	-	94387399-94387448	1qD	Mus musculus olfactory receptor 1415 (Olfr1415), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR103-12	MOR103-12
Mus musculus	RefSeq	ILMN_223593	ILMN_256242	HSPA2	NM_001002012.1	NM_001002012.1		15512	50345977	NM_001002012.1	Hspa2	NP_001002012.1	ILMN_1223285	001070484	S	2346	CCCTGATGCTCGCACACCTGACCTGTGGAAGCTTGGTTACACTAAGACAC	12	+	77507747-77507796	12qC3	Mus musculus heat shock protein 2 (Hspa2), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC7795; HSP70.2; 70kDa; MGC58299; HSP70A2; Hsp70-2	MGC7795; HSP70.2; 70kDa; MGC58299; HSP70A2; Hsp70-2
Mus musculus	RefSeq	ILMN_209033	ILMN_226968	PSTK	NM_001039534.1	NM_001039534.1		214580	88014627	NM_001039534.1	Pstk	NP_001034623.1	ILMN_2591908	001470068	S	748	GACTGGTTTGTTGCTTACTGCATTGGAAAATCCCATAAAATGTGTTGAGG	7	+	138527448-138527497	7qF3	Mus musculus phosphoseryl-tRNA kinase (Pstk), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with transfer RNA [goid 49] [evidence IDA]	Gm1099; R75284; 5730458D16Rik; 5430423O14Rik	Gm1099; R75284; 5730458D16Rik; 5430423O14Rik
Mus musculus	RefSeq	ILMN_218848	ILMN_218848	LCN10	NM_178036.3	NM_178036.3		332578	141803496	NM_178036.3	Lcn10	NP_828875.1	ILMN_1213917	005550377	S	828	CCTGGGGAGGTCAACACTGACTTCAGCCTCACTCTGCTCCCATTTCCTTC	2	+	25541323-25541372	2qA3	Mus musculus lipocalin 10 (Lcn10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	9230112J07Rik	9230112J07Rik
Mus musculus	MEEBO	ILMN_216035	ILMN_216035	RHAG	scl0001720.1_4	NM_011269.1			6755321	NM_011269.1	Rhag		ILMN_1254019	006110504	S	1039	GTGGGGTTCATAACTTGCATGGCTTACCTGGAGTTTTTGGAGGCCTTGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_216035	ILMN_216035	RHAG	scl0001720.1_4	NM_011269.1			6755321	NM_011269.1	Rhag		ILMN_2745515	002120709	S	1040	TGGGGTTCATAACTTGCATGGCTTACCTGGAGTTTTTGGAGGCCTTGCCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_223498	ILMN_223498	RAB1	NM_008996.3	NM_008996.3		19324	133891747	NM_008996.3	Rab1	NP_033022.1	ILMN_2764819	005130253	S	2394	GCCAAGCATTCTTCAATTGGGGGCTAGGGTAGGGTATGGCTGTTGATAAC	11	+	20126596-20126645	11qA3.1	Mus musculus RAB1, member RAS oncogene family (Rab1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence ISA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	mKIAA3012; Gtbp; Rab-1; Ypt1; Rab1A	mKIAA3012; Gtbp; Rab-1; Ypt1; Rab1A
Mus musculus	Riken	ILMN_204051	ILMN_204051	A130046C05RIK	ri|A130046C05|PX00123F20|AK037745|3239					AK037745	A130046C05Rik		ILMN_2561986	007320564	S	2965	GACACACTGATGGGTGTATGACAAACCCTAGGTAGTGGCAGCGCCTGGGT										
Mus musculus	MEEBO	ILMN_216637	ILMN_216637	2610028H24RIK	scl38747.8.1_5				51765715	XM_483921	2610028H24Rik		ILMN_2673459	006450544	S	1356	GTACGCCCCAGAGATTTTAAAGATGGCTCAAGTGTGTGAGCGGCCAATCC										
Mus musculus	Riken	ILMN_203733	ILMN_203733	MYB	ri|9830125P17|PX00118G03|AK036518|2253					AK036518	Myb		ILMN_1219713	003370209	S	1730	GTGCTGGGGTTACACAATGGAGCTGCTGTGGGTGCCTGGAGATCAAATCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_184753	ILMN_233109	GTF3C2	NM_027901.2	NM_027901.2		71752	85861228	NM_027901.2	Gtf3c2	NP_082177.2	ILMN_1249581	003310482	S	3428	GCCTTCCGATCTCCCTCATTAGAATAACCAACACACAGGCCCGATGGTAG	5	-	31459452-31459501	5qB1	Mus musculus general transcription factor IIIC, polypeptide 2, beta (Gtf3c2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AI225816; mKIAA0011; AU041069; 1300004C11Rik; 2610510G03Rik; TFIIIC110	AI225816; mKIAA0011; AU041069; 1300004C11Rik; 2610510G03Rik; TFIIIC110
Mus musculus	RefSeq	ILMN_202264	ILMN_233109	GTF3C2	NM_027901.2	NM_027901.2		71752	85861228	NM_027901.2	Gtf3c2	NP_082177.2	ILMN_2548251	007650221	S	3042	GCCAAGAACAAATGGCGCCCATGCATAGAGCATAGCACCTGGGCCCTTCC	5	-	31459838-31459887	5qB1	Mus musculus general transcription factor IIIC, polypeptide 2, beta (Gtf3c2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AI225816; mKIAA0011; AU041069; 1300004C11Rik; 2610510G03Rik; TFIIIC110	AI225816; mKIAA0011; AU041069; 1300004C11Rik; 2610510G03Rik; TFIIIC110
Mus musculus	RefSeq	ILMN_184753	ILMN_233109	GTF3C2	NM_027901.2	NM_027901.2		71752	85861228	NM_027901.2	Gtf3c2	NP_082177.2	ILMN_1234257	001190259	S	4482	CTCTGTTGTGATCCAGCTCAGGCGGTGTCGGGCTTGCTTTTTGAACTAAT	5	-	31458398-31458447	5qB1	Mus musculus general transcription factor IIIC, polypeptide 2, beta (Gtf3c2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AI225816; mKIAA0011; AU041069; 1300004C11Rik; 2610510G03Rik; TFIIIC110	AI225816; mKIAA0011; AU041069; 1300004C11Rik; 2610510G03Rik; TFIIIC110
Mus musculus	RefSeq	ILMN_212561	ILMN_234225	4932443I19RIK	XM_620624.3	XM_620624.3		403185	94383036	XM_620624.3	4932443I19Rik	XP_620624.1	ILMN_2627818	005690619	S	578	CAGGGACCGTCATGGGCACTGTGATGCAGCACTCCGGAGCTGCTCGGTCA	8	+	13742863-13742912	8qA1.1	PREDICTED: Mus musculus RIKEN cDNA 4932443I19 gene, transcript variant 1 (4932443I19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211557	ILMN_211557	EGLN1	NM_053207.1	NM_053207.1		112405	23956235	NM_053207.1	Egln1	NP_444437.1	ILMN_2617090	000780427	S	1399	ATCGTGGCCATCGGCTCCTTGGACAGCCACGAGCCATTTTCATACCCAAT	8	-	127433540-127433589	8qE2	Mus musculus EGL nine homolog 1 (C. elegans) (Egln1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]	Phd2; ORF13; SM-20; AI503754; C1orf12	Phd2; ORF13; SM-20; AI503754; C1orf12
Mus musculus	RefSeq	ILMN_211557	ILMN_211557	EGLN1	NM_053207.1	NM_053207.1		112405	23956235	NM_053207.1	Egln1	NP_444437.1	ILMN_2617087	003370612	S	1396	TCAATCGTGGCCATCGGCTCCTTGGACAGCCACGAGCCATTTTCATACCC	8	-	127433543-127433592	8qE2	Mus musculus EGL nine homolog 1 (C. elegans) (Egln1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]	Phd2; ORF13; SM-20; AI503754; C1orf12	Phd2; ORF13; SM-20; AI503754; C1orf12
Mus musculus	RefSeq	ILMN_211557	ILMN_211557	EGLN1	NM_053207.1	NM_053207.1		112405	23956235	NM_053207.1	Egln1	NP_444437.1	ILMN_2617086	006550097	S	1395	CTCAATCGTGGCCATCGGCTCCTTGGACAGCCACGAGCCATTTTCATACC	8	-	127433544-127433593	8qE2	Mus musculus EGL nine homolog 1 (C. elegans) (Egln1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]	Phd2; ORF13; SM-20; AI503754; C1orf12	Phd2; ORF13; SM-20; AI503754; C1orf12
Mus musculus	MEEBO	ILMN_192346	ILMN_192346	GTL2	scl42789.1.791_155				21362296	NM_144513	Gtl2		ILMN_2487260	004120414	S	2	GCCAGGGGTAGGGCTTCAGTGACCTTCTGTTGTATTTGTGTAGGTAGATG										
Mus musculus	MEEBO	ILMN_192346	ILMN_192346	GTL2	scl42789.1.791_155				21362296	NM_144513	Gtl2		ILMN_2523012	006940750	S	12	CCTGAGACTTGGGGGGGTGGGAGAAAGGCTGTTGTGTCTTCACTGTTGAG										
Mus musculus	RefSeq	ILMN_212145	ILMN_212145	PEX12	NM_134025.3	NM_134025.3		103737	142374304	NM_134025.3	Pex12	NP_598786.1	ILMN_1250747	002060730	S	2244	GCGGAAACCCAAAAGATTACTTCAGGGGTTTAAATAAATTTCCGTTCAGA	11	-	83108579-83108628	11qC	Mus musculus peroxisomal biogenesis factor 12 (Pex12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI451906	AI451906
Mus musculus	RefSeq	ILMN_199169	ILMN_199169	LOC237649	XM_137519.4	XM_137519.4			38091565	XM_137519.4	LOC237649		ILMN_1250722	004880608	S	1508	AGCCAGGTCTGTCTGGGTCTGAGGGGTTCTTGTCAAAGCAGAAACTCGTT										
Mus musculus	RefSeq	ILMN_188556	ILMN_252578	WNT11	NM_009519.1	NM_009519.1		22411	6678588	NM_009519.1	Wnt11	NP_033545.1	ILMN_1226485	001260445	S	1521	AGGAAACTGATAGGATTAAAAATAACCTGGCAGCCTGGGGCCTGAGTGCC	7	+	106001990-106002039	7qE2	Mus musculus wingless-related MMTV integration site 11 (Wnt11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_251057	ILMN_251057	2010305A19RIK	NM_027250.2	NM_027250.2		69893	31541861	NM_027250.2	2010305A19Rik	NP_081526.1	ILMN_2869524	000430240	S	2790	TTGGTCTTAGATTTGGAGACAGAGACGGGTGATCTCTTGAGTTGGAGGCC	4	+	107838564-107838613	4qC7	Mus musculus RIKEN cDNA 2010305A19 gene (2010305A19Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI451324	AI451324
Mus musculus	MEEBO	ILMN_189578	ILMN_189578	MJ-4000-128_808	MJ-4000-128_808						MJ-4000-128_808		ILMN_1248287	006270424	S	1	CAGGGCGGCATCATAGCCATCTAGACCACGAGCCCTCAACCACAAGCGAA										
Mus musculus	RefSeq	ILMN_220871	ILMN_220871	D10ERTD322E	NM_026065.2	NM_026065.2		67270	27229037	NM_026065.2	D10Ertd322e	NP_080341.1	ILMN_2727992	003170615	S	268	GACGGCAGGACAATAGTGTGCTACCACCCTTCTGTGGACATCCCCTACGA	10	-	94923328-94923377	10qC2	Mus musculus DNA segment, Chr 10, ERATO Doi 322, expressed (D10Ertd322e), mRNA.				Mrpl42; 2900055D03Rik; 2700009F22Rik	Mrpl42; 2900055D03Rik; 2700009F22Rik
Mus musculus	RefSeq	ILMN_201041	ILMN_201041	LOC381958	XM_355990.1	XM_355990.1			38088114	XM_355990.1	LOC381958		ILMN_1248700	005050692	S	269	GAACTGTCAGGAAGGATCCGTGATGAAGTTTGGCCAAACTTCAGTAGGAC										
Mus musculus	MEEBO	ILMN_189676	ILMN_189676	ZCCHC4	scl27819.15_55				51710999	XM_132052	Zcchc4		ILMN_2524383	000650278	S	2308	GCCCATCGGCCACATGTGCCCCAGGATAGCTATGAATGTGGCCAATCATA							The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218534	ILMN_218534	TLR3	NM_126166.4	NM_126166.4		142980	146149239	NM_126166.4	Tlr3	NP_569054.2	ILMN_2697002	002030682	S	4218	GCTAATTGTTGTGTCTCTTCTGCTGGAGAGTTAAATGACTTTCTTACCCA				8qB1.1	Mus musculus toll-like receptor 3 (Tlr3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45359] [evidence ISS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IMP]; The appearance of interleukin-6 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 32635] [evidence IMP]; The appearance of tumor necrosis factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 32640] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI957183	AI957183
Mus musculus	RefSeq	ILMN_212079	ILMN_246953	NCAPG2	NM_133762.3	NM_133762.3		76044	91208438	NM_133762.3	Ncapg2	NP_598523.3	ILMN_2770723	000430333	S	6277	GGGAGGAGCTCACAGGTTGATAACTTTGTAATGAGAGACATGGGAAGTGT	12	+	117701677-117701726	12qF2	Mus musculus non-SMC condensin II complex, subunit G2 (Ncapg2), mRNA. XM_001003862 XM_001003868 XM_001003871 XM_001003875	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Luzp5; 5830426I05Rik; Mtb; mCAP-G2	Luzp5; 5830426I05Rik; Mtb; mCAP-G2
Mus musculus	RefSeq	ILMN_212079	ILMN_246953	NCAPG2	NM_133762.3	NM_133762.3		76044	91208438	NM_133762.3	Ncapg2	NP_598523.3	ILMN_2677595	000610189	S	3221	GAATTCATCACCACCATCCAGTCCTGGCACAAGGACACTGCAGTGCACCA	12	+	117682804-117682853	12qF2	Mus musculus non-SMC condensin II complex, subunit G2 (Ncapg2), mRNA. XM_001003862 XM_001003868 XM_001003871 XM_001003875	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Luzp5; 5830426I05Rik; Mtb; mCAP-G2	Luzp5; 5830426I05Rik; Mtb; mCAP-G2
Mus musculus	RefSeq	ILMN_188043	ILMN_188043	SF1	NM_011750.1	NM_011750.1		22668	7106450	NM_011750.1	Sf1	NP_035880.1	ILMN_2493851	000580554	S	176	AAGACCTGACTCGTAAACTGCGCACAGGAGACCTGGGCATCCCCCCTAAC	19	+	6363711-6363760	19qA	Mus musculus splicing factor 1 (Sf1), mRNA. XM_979946 XM_979979	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis [goid 33327] [evidence IGI]; A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events [goid 22402] [evidence IGI]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 50810] [evidence IGI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	CW17R; MZFM; Zfp162; WBP4; BB094781	CW17R; MZFM; Zfp162; WBP4; BB094781
Mus musculus	RefSeq	ILMN_188043	ILMN_188043	SF1	NM_011750.1	NM_011750.1		22668	7106450	NM_011750.1	Sf1	NP_035880.1	ILMN_2894991	004590431	S	1864	CATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACA	19	+	6371035-6371084	19qA	Mus musculus splicing factor 1 (Sf1), mRNA. XM_979946 XM_979979	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis [goid 33327] [evidence IGI]; A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events [goid 22402] [evidence IGI]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 50810] [evidence IGI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	CW17R; MZFM; Zfp162; WBP4; BB094781	CW17R; MZFM; Zfp162; WBP4; BB094781
Mus musculus	RefSeq	ILMN_188043	ILMN_188043	SF1	NM_011750.1	NM_011750.1		22668	7106450	NM_011750.1	Sf1	NP_035880.1	ILMN_2449335	004490482	S	1858	CCGAGCCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGG	19	+	6371029-6371078	19qA	Mus musculus splicing factor 1 (Sf1), mRNA. XM_979946 XM_979979	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis [goid 33327] [evidence IGI]; A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events [goid 22402] [evidence IGI]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 50810] [evidence IGI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	CW17R; MZFM; Zfp162; WBP4; BB094781	CW17R; MZFM; Zfp162; WBP4; BB094781
Mus musculus	RefSeq	ILMN_241986	ILMN_241986	MTL5	NM_001039658.1	NM_001039658.1		17771	89111944	NM_001039658.1	Mtl5	NP_001034747.1	ILMN_3119327	004280307	A	586	GCCTCCAGCTGCCCTCGGAAGAAAGACTCCAGCCCCATGGTGATTTGTCA	19	+	3392223-3392261:3393925-3393935	19qA	Mus musculus metallothionein-like 5, testis-specific (tesmin) (Mtl5), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		tesmin	tesmin
Mus musculus	RefSeq	ILMN_202329	ILMN_241986	MTL5	NM_001039658.1	NM_001039658.1		17771	89111944	NM_001039658.1	Mtl5	NP_001034747.1	ILMN_1217046	004490131	S	1755	ATAGCATCAAGGCTGTGCAGGGGGCCTGGGGCTATTACAGGCCGTGTGAA	19	+	3397898-3397947	19qA	Mus musculus metallothionein-like 5, testis-specific (tesmin) (Mtl5), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		tesmin	tesmin
Mus musculus	RefSeq	ILMN_210743	ILMN_240600	ZFP618	XM_886161.2	XM_886161.2		72701	94371892	XM_886161.2	Zfp618	XP_891254.1	ILMN_1229759	003610176	S	1188	TTACACCGCACGCCTCCAGCCACCCAAACTCAGACGTTCCGAGCTCCAAA	4	+	62601720-62601769	4qB3	PREDICTED: Mus musculus zinc fingerprotein 618 (Zfp618), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_222644	ILMN_222644	ERCC1	NM_007948.1	NM_007948.1		13870	6679678	NM_007948.1	Ercc1	NP_031974.1	ILMN_2779703	004200403	S	723	CTGGAGACCTACAGGGCGTATGAGCAGAAGCCAGCCGACCTCCTTATGGA	7	+	19939697-19939746	7qA3	Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 1 (Ercc1), mRNA.	Any complex formed of proteins that act in nucleotide-excision repair [goid 109] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]; The process associated with progression of the cell from its inception to the end of its lifespan that occurs as the cell continues cycles of growth and division [goid 1302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The repair of UV-induced T-T, C-T, and C-C dimers by the recognition and removal of the damaged DNA strand from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 720] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane. Syncytia are normally derived from single cells that fuse or fail to complete cell division [goid 6949] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISO]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The stages of blood cell formation that take place after completion of embryonic development [goid 35166] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence ISO]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]	Ercc-1	Ercc-1
Mus musculus	Riken	ILMN_203786	ILMN_203786	A230050A16RIK	ri|A230050A16|PX00128O21|AK038607|1084					AK038607	A230050A16Rik		ILMN_2559969	001090095	S	861	ATTATCACCAGAAACTGCAGGTGTGGGTGTGCGCGCAAGTGCACGCCGGT										
Mus musculus	RefSeq	ILMN_218927	ILMN_218927	FCAMR	NM_144960.1	NM_144960.1		64435	21450630	NM_144960.1	Fcamr	NP_659209.1	ILMN_1254222	006480091	S	1534	CCCAGGATCACTCTAATTCAGATGACACATTTCCTACCAGATAAGCTCCC	1	+	132711108-132711157	1qE4	Mus musculus Fc receptor, IgA, IgM, high affinity (Fcamr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC129330; MGC129331	MGC129330; MGC129331
Mus musculus	RefSeq	ILMN_220828	ILMN_220828	9130014G24RIK	NM_172547.2	NM_172547.2		215772	142370016	NM_172547.2	9130014G24Rik	NP_766135.1	ILMN_2727423	006860437	S	1122	CCATCACCTGGAAATCCCTGAAGCCTCTTAGTGTTGTTCTGAGAATTCAC	10	-	10120421-10120470	10qA1	Mus musculus RIKEN cDNA 9130014G24 gene (9130014G24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216624	ILMN_246853	PPIL5	NM_001081406.1	NM_001081406.1		69706	124487160	NM_001081406.1	Ppil5	NP_001074875.1	ILMN_1212884	004780750	S	1415	TGGTAAGAAAATGTATATTATGTTAGCATTTTCAACATTTGACTCGAATT	12	+	70279911-70279960	12qC2	Mus musculus peptidylprolyl isomerase (cyclophilin) like 5 (Ppil5), mRNA.			Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	LRR-1; 2410005L11Rik; AU021780	LRR-1; 2410005L11Rik; AU021780
Mus musculus	RefSeq	ILMN_215833	ILMN_215833	CXCR6	NM_030712.3	NM_030712.3		80901	142369009	NM_030712.3	Cxcr6	NP_109637.2	ILMN_1221846	007570630	S	1536	TCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATGCTG	9	+	123720493-123720542	9qF4	Mus musculus chemokine (C-X-C motif) receptor 6 (Cxcr6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IDA]	STRL33; BONZO; BB217514; BONZO-like	STRL33; BONZO; BB217514; BONZO-like
Mus musculus	RefSeq	ILMN_223470	ILMN_223470	CYC1	NM_025567.2	NM_025567.2		66445	142363130	NM_025567.2	Cyc1	NP_079843.1	ILMN_1251771	005560451	S	756	GGCCAGGCCATTGGCATGGCTCCTCCCATCTACACAGAAGTCTTGGAGTA	15	+	76175586-76175635	15qD3	Mus musculus cytochrome c-1 (Cyc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AA408921; 2610002H19Rik	AA408921; 2610002H19Rik
Mus musculus	RefSeq	ILMN_217779	ILMN_217779	CYP2D9	NM_010006.1	NM_010006.1		13105	6753583	NM_010006.1	Cyp2d9	NP_034136.1	ILMN_2687507	002650753	S	1561	CTGTGGTACGAGACCAAGGACACTAATTCCAGACATGCTCTGTAGGGCAG	15	+	82287184-82287196:82287197-82287233	15qE1	Mus musculus cytochrome P450, family 2, subfamily d, polypeptide 9 (Cyp2d9), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	Cyp2d; P450-2D	Cyp2d; P450-2D
Mus musculus	RefSeq	ILMN_223757	ILMN_230047	A430041B07RIK	XM_922989.2	XM_922989.2		328108	94392862	XM_922989.2	A430041B07Rik	XP_928082.2	ILMN_1251488	000430059	S	2694	CTTCATCCTTCCATCCTATCCTCTCGCATCACCTCGAACTAGTCCAAAGC	12	+	66081670-66081719	12qC1	PREDICTED: Mus musculus RIKEN cDNA A430041B07 gene, transcript variant 11 (A430041B07Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_206577	ILMN_230047	A430041B07RIK	XM_922989.2	XM_922989.2		328108	94392862	XM_922989.2	A430041B07Rik	XP_928082.2	ILMN_1259781	004920670	S	3822	GAAACCAAGCATTGAACCGCCATCAGGGGTTTATGGAAGAGCAGTCCAGC	12	+	66096578-66096627	12qC1	PREDICTED: Mus musculus RIKEN cDNA A430041B07 gene, transcript variant 11 (A430041B07Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219833	ILMN_228270	OLFR633	NM_146354.1	NM_146354.1		258351	22129590	NM_146354.1	Olfr633	NP_666466.1	ILMN_1222439	007560332	S	750	GTACTATGTGCCTATGATCAGCGTGGCTCTGGTGCATCGATTCATGAAGC	7	+	111095831-111095880	7qE3	Mus musculus olfactory receptor 633 (Olfr633), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR12-5	MOR12-5
Mus musculus	RefSeq	ILMN_200741	ILMN_200741	LOC384527	XM_357692.1	XM_357692.1			38085733	XM_357692.1	LOC384527		ILMN_1253573	004200670	S	815	ACCCCCACAAAAATGAATTCCACTACCAACGTGAGGCAAGAAGTGTGGCC										
Mus musculus	Riken	ILMN_205736	ILMN_205736	A330049H05RIK	ri|A330049H05|PX00131N14|AK039482|2188					AK039482	A330049H05Rik		ILMN_2574839	007160088	S	2132	GAAGTGATTCCATGCATTCTATCAGATCACCACAGACTAAGGCTGGACTG										
Mus musculus	RefSeq	ILMN_215279	ILMN_215279	NARF	NM_026272.2	NM_026272.2		67608	31541950	NM_026272.2	Narf	NP_080548.2	ILMN_1244845	005720564	S	4296	CCTCGCATCTCACTACTCATGAAGCACCGTCTCTTCTGTGGATTCACGGC	11	+	121117071-121117120	11qE2	Mus musculus nuclear prelamin A recognition factor (Narf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			4430402O11Rik	4430402O11Rik
Mus musculus	RefSeq	ILMN_201018	ILMN_252075	LOC665746	XM_979162.1	XM_979162.1		665746	94409692	XM_979162.1	LOC665746	XP_984256.1	ILMN_1215338	003450368	S	495	TGAGGGATGCCCACCTTGCCAAAGCCCTGGTTGGCAGAGCGGTACAACAA	Y|NT_161879.3	-	164741-164790		PREDICTED: Mus musculus similar to spermiogenesis specific transcript on the Y 1 (LOC665746), mRNA.					
Mus musculus	MEEBO	ILMN_188420	ILMN_188420	9330162L04RIK	scl30205.1.1118_2						9330162L04Rik		ILMN_1212801	005090682	S	2	GCCTTTCCATTAGGCTTCTCTTAAAAGGGTGCACGCTGTAGCATGAACTC										
Mus musculus	RefSeq	ILMN_209365	ILMN_209365	2310037I24RIK	NM_133714.2	NM_133714.2		69612	31981557	NM_133714.2	2310037I24Rik	NP_598475.2	ILMN_2879506	002940152	S	2252	CGTTTCCTTGTGAACTGTAACTGAGAAAAGCAGCTCACAGGTCTGGGCTC	15	-	98346960-98347009	15qF1	Mus musculus RIKEN cDNA 2310037I24 gene (2310037I24Rik), mRNA.				MGC101985; B930009D17; MGC102368	MGC101985; B930009D17; MGC102368
Mus musculus	RefSeq	ILMN_209365	ILMN_209365	2310037I24RIK	NM_133714.2	NM_133714.2		69612	31981557	NM_133714.2	2310037I24Rik	NP_598475.2	ILMN_2711229	006350035	S	2340	TCCTGTGGTGACTCCATGTAATATGTAGTGAAATTACTGTATATAGTTTC	15	-	98346872-98346921	15qF1	Mus musculus RIKEN cDNA 2310037I24 gene (2310037I24Rik), mRNA.				MGC101985; B930009D17; MGC102368	MGC101985; B930009D17; MGC102368
Mus musculus	RefSeq	ILMN_214334	ILMN_214334	MYEF2	NM_010852.1	NM_010852.1		17876	27819593	NM_010852.1	Myef2	NP_034982.1	ILMN_1236139	000650040	S	1458	GGAGAATGGCAAGTCAAAAGGCTGTGGGACAGTCAGGTTTGAATCTGCAG	2	-	124914695-124914744	2qF1	Mus musculus myelin basic protein expression factor 2, repressor (Myef2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	9430071B01; mKIAA1341	9430071B01; mKIAA1341
Mus musculus	MEEBO	ILMN_194040	ILMN_194040	4921528I07RIK	scl0077049.1_131				51765217	XM_486266	4921528I07Rik		ILMN_1252083	006510411	S	2	CACAGTCTGTGACAATGGTGGAACCCAAAGGATGTAAATTTTCTTCAGTC										
Mus musculus	Riken	ILMN_206915	ILMN_206915	A430072D10RIK	ri|A430072D10|PX00137M18|AK079800|793					AK079800	A430072D10Rik		ILMN_1256706	004640575	S	1	GGATGCCCATTTAGTCTCTCACTGTCCGCGGCTTTATGCGGCGCTGGAGC										
Mus musculus	RefSeq	ILMN_241062	ILMN_241062	SUCLG2	NM_011507.1	NM_011507.1		20917	51890204	NM_011507.1	Suclg2	NP_035637.1	ILMN_3046836	006180382	I	1	AAGAGGTAATCCGGTTCCTGGTTAAGATGGCGTCCCCGGTGGCCATCGCG	6	-	95668732-95668769:95668770-95668781	6qD2	Mus musculus succinate-Coenzyme A ligase, GDP-forming, beta subunit (Suclg2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate [goid 4776] [evidence IEA]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [evidence ISA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	D6Wsu120e; MGC91183; AF171077; AW556404	D6Wsu120e; MGC91183; AF171077; AW556404
Mus musculus	RefSeq	ILMN_241062	ILMN_241062	SUCLG2	NM_011507.1	NM_011507.1		20917	51890204	NM_011507.1	Suclg2	NP_035637.1	ILMN_3122427	004880356	A	1720	CAGAAGGGTACAGCTAAGACACCTGAGCTTCTGTGACCAGTGGCCTCCAC	6	-	95424588-95424637	6qD2	Mus musculus succinate-Coenzyme A ligase, GDP-forming, beta subunit (Suclg2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate [goid 4776] [evidence IEA]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [evidence ISA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	D6Wsu120e; MGC91183; AF171077; AW556404	D6Wsu120e; MGC91183; AF171077; AW556404
Mus musculus	RefSeq	ILMN_216600	ILMN_216600	2610019P18RIK	NM_178612.3	NM_178612.3		66455	65301473	NM_178612.3	2610019P18Rik	NP_848727.1	ILMN_2843403	002490050	S	1658	ACATGCACACATTATCGATGAGGGAGCACCCAGACAGTGGGGCCATTGGC	5	+	138634931-138634980	5qG2	Mus musculus RIKEN cDNA 2610019P18 gene (2610019P18Rik), mRNA.					
Mus musculus	Riken	ILMN_204786	ILMN_204786	C230053B09RIK	ri|C230053B09|PX00175N18|AK048765|1408					AK048765	C230053B09Rik		ILMN_2567596	000050458	S	866	GCTATGAGGTCCTGGTCTCTGGCTTCACTCAAGGGCACCAAACAAAGCCC										
Mus musculus	RefSeq	ILMN_216881	ILMN_216881	SMARCD2	NM_031878.1	NM_031878.1		83796	13994210	NM_031878.1	Smarcd2	NP_114084.1	ILMN_1216116	002510201	S	2270	GCTGGAGGACTGCTGTTACCTTTTGCAGTCGGTCTTAAAGAGGATGGGCC	11	-	106124544-106124593	11qE1	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 (Smarcd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		Baf60b; AW322457	Baf60b; AW322457
Mus musculus	RefSeq	ILMN_228029	ILMN_228029	ENO1	NM_023119.1	NM_023119.1		13806	12963490	NM_023119.1	Eno1	NP_075608.1	ILMN_2958159	000610253	S	1122	AAAGTGAACCAGATCGGCTCCGTGACCGAGTCCCTGCAGGCGTGTAAGCC	4	+	149621721-149621761:149621940-149621948	4qE2	Mus musculus enolase 1, alpha non-neuron (Eno1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: 2-phospho-D-glycerate = phosphoenolpyruvate + H2O [goid 4634] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Eno-1; MGC107267; MGC103111; 0610008I15; MBP-1; AL022784	Eno-1; MGC107267; MGC103111; 0610008I15; MBP-1; AL022784
Mus musculus	MEEBO	ILMN_217212	ILMN_217212	E130014H08RIK	scl16748.9_4	NM_177835.2			31342889	NM_177835.2	E130014H08Rik		ILMN_2680388	004260037	S	2084	CTAGAGCCCAGTTTCAGGATCTTCCCTGGATATGTTGAAAAGTCAGGATT										
Mus musculus	RefSeq	ILMN_185172	ILMN_227410	LOC665155	XM_976577.1	XM_976577.1		665155	94392829	XM_976577.1	LOC665155	XP_981671.1	ILMN_2424792	007510739	S	7171	CTTTGTAAGTTAGTGTAATTATTAATACTTTATTAATGTGAGCCTATCAT	12	+	56111184-56111233	12qC1	PREDICTED: Mus musculus similar to signal recognition particle 54, transcript variant 8 (LOC665155), mRNA.					
Mus musculus	RefSeq	ILMN_218883	ILMN_218883	SPHK2	NM_020011.4	NM_020011.4		56632	142354966	NM_020011.4	Sphk2	NP_064395.2	ILMN_2718791	000510367	S	2741	TTCTTCAGCTTATTGACCAGCCAGGGTTTCTTCTTGCCTACTCCGGTGCC	7	-	52965832-52965881	7qB4	Mus musculus sphingosine kinase 2 (Sphk2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol [goid 6669] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence NAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The chemical reactions and pathways involving sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues [goid 6670] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the reaction: ATP + sphinganine = ADP + sphinganine 1-phosphate [goid 8481] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the reaction: sphingosine + ATP = sphingosine 1-phosphate + ADP [goid 17050] [evidence IDA]; Catalysis of the reaction: sphingosine + ATP = sphingosine 1-phosphate + ADP [goid 17050] [evidence IMP]	C76851; MGC102297	C76851; MGC102297
Mus musculus	RefSeq	ILMN_219109	ILMN_219109	DCT	NM_010024.1	NM_010024.1		13190	6753613	NM_010024.1	Dct	NP_034154.1	ILMN_2770040	002070102	S	2127	GGGTCATTCACCACGGTCAAAGTAAGGTGTGGCTAGTTATATGTGACCTT	14	-	116895161-116895210	14qE4	Mus musculus dopachrome tautomerase (Dct), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence IDA]; The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: L-dopachrome = 5,6-dihydroxyindole-2-carboxylate [goid 4167] [evidence IDA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	TRP-2; DT; TRP2; slt; Tyrp2; slaty; Tyrp-2	TRP-2; DT; TRP2; slt; Tyrp2; slaty; Tyrp-2
Mus musculus	RefSeq	ILMN_208972	ILMN_208972	CLUAP1	NM_029738.2	NM_029738.2		76779	118130654	NM_029738.2	Cluap1	NP_084014.1	ILMN_1218814	003610253	S	564	CACTGCCAAAGGAGCCTCTCTGTATGACTTGCTGGGCAAAGAGGTTGAGC	16	+	3917867-3917916	16qA1	Mus musculus clusterin associated protein 1 (Cluap1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2610111M03Rik; 2310030D15Rik	2610111M03Rik; 2310030D15Rik
Mus musculus	RefSeq	ILMN_186964	ILMN_208972	CLUAP1	NM_029738.2	NM_029738.2		76779	118130654	NM_029738.2	Cluap1	NP_084014.1	ILMN_2440006	006580762	S	133	GGAAAGACATGGCGCTCTGGTCCCCAAGAGTCCACTGGGGCGCCGCTGCC	16	+	3909141-3909153:3911451-3911487	16qA1	Mus musculus clusterin associated protein 1 (Cluap1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2610111M03Rik; 2310030D15Rik	2610111M03Rik; 2310030D15Rik
Mus musculus	RefSeq	ILMN_210168	ILMN_210168	SLC26A2	NM_007885.2	NM_007885.2		13521	119672924	NM_007885.2	Slc26a2	NP_031911.1	ILMN_1224606	004290750	S	3713	TGATGCCAGTGACCACTTTTAATGCAGGACTTGGAGCCTTCACAGGGCCC	18	-	61356608-61356657	18qE1	Mus musculus solute carrier family 26 (sulfate transporter), member 2 (Slc26a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	Dtd; ST-OB	Dtd; ST-OB
Mus musculus	RefSeq	ILMN_195550	ILMN_228190	CCDC25	NM_145944.4	NM_145944.4		67179	119672913	NM_145944.4	Ccdc25	NP_666056.1	ILMN_1253682	005270064	S	1744	CCTGCTACCCAGTAGATAGATAACCTTTTTGTTAGTGTTTAAGGGAGCCC	14	+	66484958-66485007	14qD1	Mus musculus coiled-coil domain containing 25 (Ccdc25), mRNA.				2610528H13Rik; MGC38132	2610528H13Rik; MGC38132
Mus musculus	RefSeq	ILMN_218204	ILMN_218204	SERTAD3	NM_133210.2	NM_133210.2		170742	40254112	NM_133210.2	Sertad3	NP_573473.1	ILMN_1231396	002480088	S	879	CTCGCTTACACATTTCTTCTGCCTCCAGTTCCCACTGTCCTTATGACCAC	7	+	28262005-28262054	7qA3	Mus musculus SERTA domain containing 3 (Sertad3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	D1Mgi51; Sei3; AW124805; Rbt1	D1Mgi51; Sei3; AW124805; Rbt1
Mus musculus	RefSeq	ILMN_217053	ILMN_217053	LASS6	NM_172856.3	NM_172856.3		241447	146198648	NM_172856.3	Lass6	NP_766444.1	ILMN_2685194	006940356	S	147	ACCTGAAGAACACGGAGGAAGCCACCTTTCCGCAGGCGGAGGACCTCTAC				2qC2	Mus musculus LAG1 homolog, ceramide synthase 6 (Lass6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence IDA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]	T1L; AW544719; 4732462C07Rik	T1L; AW544719; 4732462C07Rik
Mus musculus	RefSeq	ILMN_217053	ILMN_217053	LASS6	NM_172856.3	NM_172856.3		241447	146198648	NM_172856.3	Lass6	NP_766444.1	ILMN_2678580	006650288	S	3667	CTAAGTGGTGATTTTGGTAATTAGCATAGCTTGTGGTGATGTCTCCTCCT				2qC2	Mus musculus LAG1 homolog, ceramide synthase 6 (Lass6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence IDA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]	T1L; AW544719; 4732462C07Rik	T1L; AW544719; 4732462C07Rik
Mus musculus	RefSeq	ILMN_199224	ILMN_199224	LOC380735	XM_358414.1	XM_358414.1			38091931	XM_358414.1	LOC380735		ILMN_1231110	002480369	S	176	CCCGTTACCTGAAGGATTGCTCACTGACCTGGAAGGTGTTGCTGAGAACG										
Mus musculus	RefSeq	ILMN_218960	ILMN_218960	PIM1	NM_008842.2	NM_008842.2		18712	40254619	NM_008842.2	Pim1	NP_032868.2	ILMN_2932713	000240288	S	1606	GGGGGGAGAGGAAAACAGTCTGGGGGGTGGGATAAAAACTAGCACCATAT	17	+	29632024-29632073	17qA3.3	Mus musculus proviral integration site 1 (Pim1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]	Pim-1	Pim-1
Mus musculus	Riken	ILMN_202422	ILMN_202422	PREP	ri|1810054P09|ZX00043M09|AK007865|561					AK007865	Prep		ILMN_2549494	005310192	S	432	TCCATGGGCCTCCTTTGTAGACCACCCAGAAGAGGCATTGTAGCCCCAAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISS]		
Mus musculus	RefSeq	ILMN_211380	ILMN_211380	SNF1LK2	NM_178710.3	NM_178710.3		235344	38569496	NM_178710.3	Snf1lk2	NP_848825.2	ILMN_1232372	000520131	S	2274	GGCCCAGAGTCCTTGTCCAGTGTATTGTAAAGAGCCACCTCGGAGCCTGG	9	-	50704770-50704819	9qA5.3	Mus musculus SNF1-like kinase 2 (Snf1lk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of insulin receptor signaling [goid 46626] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]	G630080D20Rik; Sik2	G630080D20Rik; Sik2
Mus musculus	RefSeq	ILMN_211492	ILMN_211492	POU4F2	NM_138944.2	NM_138944.2		18997	47059066	NM_138944.2	Pou4f2	NP_620394.2	ILMN_2755770	003060494	S	1247	CGAGAAGCTCACTAAGCCGGAGCTCTTCAATGGCGCGGAGAAGAAGCGCA	8	-	80958823-80958872	8qC1	Mus musculus POU domain, class 4, transcription factor 2 (Pou4f2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; Long distance growth of a single axon process involved in cellular development [goid 48676] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Brn-3b; Pou4f-rs1; mBrn3-3R; Brn3b; Brn-3.2	Brn-3b; Pou4f-rs1; mBrn3-3R; Brn3b; Brn-3.2
Mus musculus	RefSeq	ILMN_211492	ILMN_211492	POU4F2	NM_138944.2	NM_138944.2		18997	47059066	NM_138944.2	Pou4f2	NP_620394.2	ILMN_2688586	003710519	S	3106	TGTTTCATTGTCTTTCATTGAAGAGATGATTTTAATGTTTTACTGGCAAA	8	-	80956964-80957013	8qC1	Mus musculus POU domain, class 4, transcription factor 2 (Pou4f2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; Long distance growth of a single axon process involved in cellular development [goid 48676] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Brn-3b; Pou4f-rs1; mBrn3-3R; Brn3b; Brn-3.2	Brn-3b; Pou4f-rs1; mBrn3-3R; Brn3b; Brn-3.2
Mus musculus	RefSeq	ILMN_211492	ILMN_211492	POU4F2	NM_138944.2	NM_138944.2		18997	47059066	NM_138944.2	Pou4f2	NP_620394.2	ILMN_1247447	001090204	S	1369	CGGAGAAGATCGCGGCCATCGCCGAAAAGCTGGATCTCAAGAAAAATGTG	8	-	80958701-80958750	8qC1	Mus musculus POU domain, class 4, transcription factor 2 (Pou4f2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; Long distance growth of a single axon process involved in cellular development [goid 48676] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Brn-3b; Pou4f-rs1; mBrn3-3R; Brn3b; Brn-3.2	Brn-3b; Pou4f-rs1; mBrn3-3R; Brn3b; Brn-3.2
Mus musculus	RefSeq	ILMN_194587	ILMN_227609	7530404M11RIK	NM_183224.2	NM_183224.2		329731	54607129	NM_183224.2	7530404M11Rik	NP_899047.1	ILMN_2714064	006250093	S	974	AAGGTCACACGGTAACTCTCGGAGGTCATGGCTTAGGTAGGACAGCCTTG	3	-	104573616-104573651:104573652-104573663:104575098-104575099	3qF2.2	Mus musculus RIKEN cDNA 7530404M11 gene (7530404M11Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			TAFA3; Tafa-3	TAFA3; Tafa-3
Mus musculus	RefSeq	ILMN_194587	ILMN_227609	7530404M11RIK	NM_183224.2	NM_183224.2		329731	54607129	NM_183224.2	7530404M11Rik	NP_899047.1	ILMN_2507761	001770082	S	3745	CAGCATAGAGTTCTTTCCACTATTGTACATCCCATTGTACCCCAGAGCAG	3	-	104570845-104570894	3qF2.2	Mus musculus RIKEN cDNA 7530404M11 gene (7530404M11Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			TAFA3; Tafa-3	TAFA3; Tafa-3
Mus musculus	RefSeq	ILMN_195879	ILMN_195879	UPK1B	NM_178924.2	NM_178924.2		22268	31342145	NM_178924.2	Upk1b	NP_849255.1	ILMN_2936646	004880433	S	1687	GTTTGCTCACATTAACGATCCTGAAGGAAGTCCTGACAAGTCACCATTTG	16	-	38692546-38692595	16qB4	Mus musculus uroplakin 1B (Upk1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Upk1; UPIb; Tspan20; AI413235	Upk1; UPIb; Tspan20; AI413235
Mus musculus	RefSeq	ILMN_194709	ILMN_321289	LOC100041450	XM_001476443.1	XM_001476443.1		100041450	149255144	XM_001476443.1	LOC100041450	XP_001476493.1	ILMN_1242660	004040328	S	246	ATTCCTCTCAAGTTTGCTAGAGCCCCTCCGACTGGCAAGGAGAAGAAGAG	6	-	48689771-48689820	6qB2.3	PREDICTED: Mus musculus hypothetical protein LOC100041450 (LOC100041450), mRNA.					
Mus musculus	RefSeq	ILMN_201546	ILMN_201546	PRL2C3	NM_011118.1	NM_011118.1		18812	13654299	NM_011118.1	Prl2c3	NP_035248.1	ILMN_2875585	001570059	S	10	CTCCAGTAAAGCATCTTCCCGGAATCCACAGCTAAGCCTGGGTAGGACTC	13	-	12892286-12892335	13qA1	Mus musculus prolactin family 2, subfamily c, member 3 (Prl2c3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]	PLF-2; MRP-2; Plf2	PLF-2; MRP-2; Plf2
Mus musculus	RefSeq	ILMN_220957	ILMN_220957	HGF	NM_010427.3	NM_010427.3		15234	145301589	NM_010427.3	Hgf	NP_034557.2	ILMN_2729117	003370433	S	2310	TAGCCATAGAAGAGGCCAGTGTGTTTGAAGCATCCATGGATACATGAGGA				5qA2	Mus musculus hepatocyte growth factor (Hgf), mRNA.		The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The series of molecular signals generated as a consequence of the hepatocyte growth factor receptor binding to one of its physiological ligands [goid 48012] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51450] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	NK1; NK2; C230052L06Rik; SF/HGF; HGF/SF	NK1; NK2; C230052L06Rik; SF/HGF; HGF/SF
Mus musculus	Riken	ILMN_206850	ILMN_206850	D430036M17RIK	ri|D430036M17|PX00194F03|AK085102|1707					AK085102	D430036M17Rik		ILMN_2583143	004490435	S	1497	GAGGGCATAGTACTGGCAAAACCATACCCAGAGCTGCAGTTCACTTCTGC										
Mus musculus	RefSeq	ILMN_230547	ILMN_230547	RPL3	NM_013762.1	NM_013762.1		27367	7305440	NM_013762.1	Rpl3	NP_038790.1	ILMN_2974021	004070348	S	1227	GGACCACTTTGTGCAGATGGTGGGGTCTCACCAATAAAATATTTCTACTC				15qE1	Mus musculus ribosomal protein L3 (Rpl3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC103388; F2; J1	MGC103388; F2; J1
Mus musculus	RefSeq	ILMN_194486	ILMN_324580	4930412F12RIK	XM_001475690.1	XM_001475690.1		74849	149258792	XM_001475690.1	4930412F12Rik	XP_001475740.1	ILMN_2506850	002370670	S	1549	GGTGCATCATAACTTCTTTCTAGGTAGTTTATTAGTGTTGATATATAATA					PREDICTED: Mus musculus RIKEN cDNA 4930412F12 gene (4930412F12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211708	ILMN_225226	EML2	XM_895770.2	XM_895770.2		72205	94379500	XM_895770.2	Eml2	XP_900863.1	ILMN_1229138	003890630	S	2796	CAGTAATATATACCCAGAGTATGTCTATAGAAGAGGGGGTTATGGGGCGG	7	+	19791637-19791686	7qA3	PREDICTED: Mus musculus echinoderm microtubule associated protein like 2, transcript variant 3 (Eml2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]				
Mus musculus	RefSeq	ILMN_210006	ILMN_225226	EML2	XM_895770.2	XM_895770.2		72205	94379500	XM_895770.2	Eml2	XP_900863.1	ILMN_2601281	000540494	S	1436	ACCTGTGGCAAATCCCACATCTACTTCTGGAGCCTGGAGGGAGGCAGTCT	7	+	19776993-19777042	7qA3	PREDICTED: Mus musculus echinoderm microtubule associated protein like 2, transcript variant 3 (Eml2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215876	ILMN_215876	CHAF1B	NM_028083.3	NM_028083.3		110749	146141116	NM_028083.3	Chaf1b	NP_082359.1	ILMN_2664686	007200270	S	1766	AGGAACGTGAAGGAGATGCCCAAAACCTGGCCCCTGATGACTCTTCCAAG				16qC4	Mus musculus chromatin assembly factor 1, subunit B (p60) (Chaf1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]		CAF1P60; MPHOSPH7; 2600017H24Rik; CAF1A; CAF-Ip60; CAF1; C76145	CAF1P60; MPHOSPH7; 2600017H24Rik; CAF1A; CAF-Ip60; CAF1; C76145
Mus musculus	RefSeq	ILMN_260473	ILMN_260473	SOX21	NM_145464.1	NM_145464.1		223227	21703919	NM_145464.1	Sox21	NP_663439.1	ILMN_3163306	003130593	A	1471	GAGCTCGGTTCTGATGTTCGGTCTGAAATAGCTGGCCAAGGGGAGAGCCG				14qE4	Mus musculus SRY-box containing gene 21 (Sox21), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Sox25	Sox25
Mus musculus	Riken	ILMN_207438	ILMN_207438	ALOX12	ri|9530045P09|PX00653B10|AK079232|2216					AK079232	Alox12		ILMN_2587600	005390408	S	1681	GAGGTGGCTAGTGGATAAAATGCTTACTGCTCAAGCGTGGGGAACCTGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,14Z)-(12S)-12-hydroperoxyicosa-5,8,10,14-tetraenoate [goid 4052] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199207	ILMN_199207	LOC217151	XM_147612.3	XM_147612.3			38091790	XM_147612.3	LOC217151		ILMN_1246001	005490300	S	4	CTCTACTCGCAACACTAAAGCAGATAGTTCCAACTTCAGTTTTCTCAGGG										
Mus musculus	RefSeq	ILMN_214137	ILMN_214137	NAP1L1	NM_015781.2	NM_015781.2		53605	31543310	NM_015781.2	Nap1l1	NP_056596.1	ILMN_3004970	006110152	S	3258	CCCTAAGGTGGTAACGAGGCAGGGGAGGATGGCATGAAGTTGCATTAAGT	10	+	110901584-110901633	10qD1	Mus musculus nucleosome assembly protein 1-like 1 (Nap1l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA407126; AI256722; D10Ertd68e; NAP-1	AA407126; AI256722; D10Ertd68e; NAP-1
Mus musculus	Riken	ILMN_203608	ILMN_203608	A930015K17RIK	ri|A930015K17|PX00066E24|AK044485|2535					AK044485	A930015K17Rik		ILMN_1247353	003370458	S	2484	GCCTTGAGGAACCTTGTGGCAGAGAGGGGTGATAGACCTAAATGACTACA										
Mus musculus	Riken	ILMN_204483	ILMN_204483	CAMK2D	ri|B130009G18|PX00157O05|AK044872|2709					AK044872	Camk2d		ILMN_1237126	000940184	S	2529	CACTGGCACTGTTCAGGCATACTCTCTGTATTACTAGGGCACTTCCCTAC						Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]		
Mus musculus	RefSeq	ILMN_218676	ILMN_249431	RAI1	NM_001037764.1	NM_001037764.1		19377	83649744	NM_001037764.1	Rai1	NP_001032853.1	ILMN_2698872	004640561	S	6235	TGGCTCAGTGGACGACGTGGGGCAGACCCAAGCCTTTCTTAGAGGCCCAG	11	+	60011807-60011856	11qB1.3-qB2	Mus musculus retinoic acid induced 1 (Rai1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gt1	Gt1
Mus musculus	RefSeq	ILMN_224012	ILMN_235654	MAP2K4	NM_009157.4	NM_009157.4		26398	145966829	NM_009157.4	Map2k4	NP_033183.1	ILMN_2773179	006940612	S	3577	GGTTGTGATGATGGTCTTGTAATCTGATTTTCTGCAGTCATACCCCGAGA				11qB3	Mus musculus mitogen-activated protein kinase kinase 4 (Map2k4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MEK4; Serk1; MKK4; Sek1; JNKK1; PRKMK4	MEK4; Serk1; MKK4; Sek1; JNKK1; PRKMK4
Mus musculus	RefSeq	ILMN_210840	ILMN_210840	TAS2R109	NM_207017.1	NM_207017.1		387343	46309582	NM_207017.1	Tas2r109	NP_996900.1	ILMN_1225944	000450403	S	855	CCATTCATATGTCTTGATTCTGAGAGACAGGAAGCTGAGACACGCCTCTC	6	-	132930079-132930128	6qG1	Mus musculus taste receptor, type 2, member 109 (Tas2r109), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Tas2r9; T2R09; mGR09; mt2r62	Tas2r9; T2R09; mGR09; mt2r62
Mus musculus	RefSeq	ILMN_246741	ILMN_246741	CACNB4	NM_146123.2	NM_146123.2		12298	80861469	NM_146123.2	Cacnb4	NP_666235.1	ILMN_3047749	007610551	I	44	GCCAGGTCTGCATGTCTCTGGGGATAACCTCGCCCTGTATGATGTGAACG	2	-	52413994-52414043	2qC1.1	Mus musculus calcium channel, voltage-dependent, beta 4 subunit (Cacnb4), transcript variant 2, mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IMP]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process whose specific outcome is the progression of the muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48747] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48541] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; A neurological process that causes the sequential depolarization of a neuron's cell membrane along an axon [goid 19227] [evidence IMP]; The regulated release of gamm-aminobutyric acid by a cell or group of cells. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues [goid 14051] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 46058] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 51932] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	lh; lethargic; Cchb4; 3110038O15Rik; MGC31529	lh; lethargic; Cchb4; 3110038O15Rik; MGC31529
Mus musculus	RefSeq	ILMN_246741	ILMN_246741	CACNB4	NM_146123.2	NM_146123.2		12298	80861469	NM_146123.2	Cacnb4	NP_666235.1	ILMN_3123491	001850338	A	7482	GGCTGTTGATATCCCAGGCTATTCCTGTGTCTCTGCTGATGTGGTGGGGG	2	-	52284192-52284241	2qC1.1	Mus musculus calcium channel, voltage-dependent, beta 4 subunit (Cacnb4), transcript variant 2, mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IMP]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process whose specific outcome is the progression of the muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48747] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48541] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; A neurological process that causes the sequential depolarization of a neuron's cell membrane along an axon [goid 19227] [evidence IMP]; The regulated release of gamm-aminobutyric acid by a cell or group of cells. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues [goid 14051] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 46058] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 51932] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	lh; lethargic; Cchb4; 3110038O15Rik; MGC31529	lh; lethargic; Cchb4; 3110038O15Rik; MGC31529
Mus musculus	MEEBO	ILMN_195444	ILMN_195444	IGHV1S32_X02464_IG_HEAVY_VARIABLE_1S32_136	IGHV1S32_X02464_Ig_heavy_variable_1S32_136						IGHV1S32_X02464_Ig_heavy_variable_1S32_136		ILMN_2515630	000510397	S	13	CTGGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGACCACA										
Mus musculus	Riken	ILMN_203565	ILMN_203565	SND1-PENDING	ri|9430061I19|PX00109N11|AK034914|3636					AK034914	Snd1-pending		ILMN_1244808	001580671	S	3285	CAGCTCGCATGGGTCCAGGAAAAGCAGCATCCACCCCAAAGATTCCCTCA										
Mus musculus	RefSeq	ILMN_198262	ILMN_198262	LOC271505	XM_195066.3	XM_195066.3			38083421	XM_195066.3	LOC271505		ILMN_1242993	000150133	S	1657	GGCGTTGAGCTACAGGCAGGAGATGAGGTGGAATTCTCCAGTGATCAGCG										
Mus musculus	MEEBO	ILMN_184238	ILMN_184238	1700010A01RIK	scl2146.1.1_273						1700010A01Rik		ILMN_1240723	007100309	S	13	CACCGCGACTTAGTTCGGAGTCTTTAGTTCTCAGCCCTCCCTTCCGTCCT										
Mus musculus	RefSeq	ILMN_198959	ILMN_198959	LOC208462	XM_147095.2	XM_147095.2			38090089	XM_147095.2	LOC208462		ILMN_1245306	004890528	S	1244	CGGAGGATGAAGGTGAGAAGAGAGCTGGAGGTGCAAGCAGGGGTCTTCCT										
Mus musculus	RefSeq	ILMN_210392	ILMN_210392	TATDN1	NM_175151.2	NM_175151.2		69694	31341006	NM_175151.2	Tatdn1	NP_780360.1	ILMN_2801974	001410598	S	1126	GGGAGAATAAGGCAGCAGAGGCGCTCGCACTTCTCAAGGTCTTGGTCAGG	15	-	58720426-58720475	15qD1	Mus musculus TatD DNase domain containing 1 (Tatdn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16888] [evidence IEA]	2310079P03Rik; CDA11	2310079P03Rik; CDA11
Mus musculus	RefSeq	ILMN_201179	ILMN_201179	LOC384898	XM_357929.1	XM_357929.1			38089633	XM_357929.1	LOC384898		ILMN_1226602	006350504	S	1145	TCCAGCGTGAGTACATCTGGGACAAGAGCAAGGACAGGGAGTGCTCAGAG										
Mus musculus	RefSeq	ILMN_220770	ILMN_220770	ARSB	NM_009712.3	NM_009712.3		11881	125656170	NM_009712.3	Arsb	NP_033842.3	ILMN_3160662	005130390	S	1396	GGGATCAGATACAAAAATTGGAAACTCCTCACGGGCCACCCAGGCTGTGG	13	+	94709262-94709304:94710421-94710427	13qC3-qD1	Mus musculus arylsulfatase B (Arsb), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the hydrolysis of the 4-sulfate groups of the N-acetyl-D-galactosamine 4-sulfate units of chondroitin sulfate and dermatan sulfate [goid 3943] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [evidence IDA]	As-1r; Asr-1; As-1t; As1-r; 1110007C02Rik; As1-s; As-1; As1-t; As-1s; Ast-1; As1; AI480648	As-1r; Asr-1; As-1t; As1-r; 1110007C02Rik; As1-s; As-1; As1-t; As-1s; Ast-1; As1; AI480648
Mus musculus	RefSeq	ILMN_210363	ILMN_220770	ARSB	NM_009712.3	NM_009712.3		11881	125656170	NM_009712.3	Arsb	NP_033842.3	ILMN_1225374	000130735	S	3651	GCTGTCCTCAGTTCCAGCTGTGACTGTAGGCAGTGTTTGGAATATTAGCA	13	+	94712633-94712682	13qC3-qD1	Mus musculus arylsulfatase B (Arsb), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the hydrolysis of the 4-sulfate groups of the N-acetyl-D-galactosamine 4-sulfate units of chondroitin sulfate and dermatan sulfate [goid 3943] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [evidence IDA]	As-1r; Asr-1; As-1t; As1-r; 1110007C02Rik; As1-s; As-1; As1-t; As-1s; Ast-1; As1; AI480648	As-1r; Asr-1; As-1t; As1-r; 1110007C02Rik; As1-s; As-1; As1-t; As-1s; Ast-1; As1; AI480648
Mus musculus	RefSeq	ILMN_220615	ILMN_220615	IL3RA	NM_008369.1	NM_008369.1		16188	6680428	NM_008369.1	Il3ra	NP_032395.1	ILMN_2916571	002600240	S	1015	CAACGCTGGTGCCATCTCCTTCCGGGTCAAGTCGAGGTCAGAGGTTTACC	14	+	15183590-15183639	14qA2	Mus musculus interleukin 3 receptor, alpha chain (Il3ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	CDw123; SUT-1; CD123	CDw123; SUT-1; CD123
Mus musculus	RefSeq	ILMN_210088	ILMN_321035	LOC640195	XR_034363.1	XR_034363.1		640195	149258072	XR_034363.1	LOC640195		ILMN_2602097	002630661	S	11354	GCTCACAAAAGCAGATGGGACTGTCCAAGCAAGATCAGCTACCAGGGATC					PREDICTED: Mus musculus similar to mucin 5, subtype B, tracheobronchial (LOC640195), misc RNA.					
Mus musculus	RefSeq	ILMN_216188	ILMN_216188	KCNH1	NM_010600.2	NM_010600.2		16510	84370338	NM_010600.2	Kcnh1	NP_034730.1	ILMN_1244779	005910228	S	1102	GGGTGATCCAGGGAAGATTGGTTTTGCTGATCAGATCCCACCACCACTGG	1	+	194100987-194101036	1qH6	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 1 (Kcnh1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	M-eag; MGC124420; MGC124419	M-eag; MGC124420; MGC124419
Mus musculus	RefSeq	ILMN_197276	ILMN_197276	LOC228141	XM_141030.2	XM_141030.2			38074935	XM_141030.2	LOC228141		ILMN_1251054	005130187	S	1412	CTAGAGCACCTTCCCCTTCAGACAGGTCTCTGTCACCTTTGTGGGAACAA										
Mus musculus	MEEBO	ILMN_224090	ILMN_224090	1810018F18RIK	scl069166.3_20				21311954	NM_028795	1810018F18Rik		ILMN_2774587	000620403	S	679	ATGTGGTGGGAAGCGTGTAAGGACAGAGATGAGGAAGGGTAGATTAAGGC										
Mus musculus	RefSeq	ILMN_190047	ILMN_318903	LOC100044566	XM_001472574.1	XM_001472574.1		100044566	149262937	XM_001472574.1	LOC100044566	XP_001472624.1	ILMN_2719784	000450300	S	4318	CCAGGCCCAGCAGAAGAGCCTCCTTCAGCAGCTACTGACTGAATAACCAC					PREDICTED: Mus musculus similar to Nuclear receptor coactivator 1 (NCoA-1) (Steroid receptor coactivator 1) (SRC-1) (Nuclear receptor coactivator protein 1) (mNRC-1) (LOC100044566), mRNA.					
Mus musculus	RefSeq	ILMN_215363	ILMN_215363	5830411N06RIK	NM_175533.3	NM_175533.3		244234	142352147	NM_175533.3	5830411N06Rik	NP_780742.1	ILMN_2658592	003990403	S	2619	GGCGAGGAAGCTTGGTTGGCATGTGCAGGTGAGCTGTGCTATGCATTCTA	7	+	147483262-147483311	7qF4	Mus musculus RIKEN cDNA 5830411N06 gene (5830411N06Rik), transcript variant 3, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_206795	ILMN_206795	1190020E20RIK	ri|1190020E20|ZA00008K14|AK075695|915					AK075695	1190020E20Rik		ILMN_1238046	003940403	S	636	GACCTCACAATTAGCTTTGGCAGCGGAAGGCTTTGTCAATGGCAGTCACC										
Mus musculus	Riken	ILMN_205606	ILMN_205606	B930074N15RIK	ri|B930074N15|PX00166C01|AK047479|2296					AK047479	B930074N15Rik		ILMN_1220414	000070349	S	1826	GCTAGGTGGGTAAGGATTTGGCGGAGACAAACAGAAGCAAACACAGGCCG										
Mus musculus	RefSeq	ILMN_215989	ILMN_311058	LOC100044873	XM_001473805.1	XM_001473805.1		100044873	149261247	XM_001473805.1	LOC100044873	XP_001473855.1	ILMN_2666070	006270162	S	2264	GCACCCAAAGGGAAACTCAGCTGCTTTGCTCTGGAACACAGTTGCCAGGT					PREDICTED: Mus musculus similar to substance K receptor (LOC100044873), mRNA.					
Mus musculus	RefSeq	ILMN_210954	ILMN_210954	OSTB	NM_178933.2	NM_178933.2		330962	31341457	NM_178933.2	Ostb	NP_849264.1	ILMN_2610981	006860221	S	174	GGTCCTGGCAGTCCTGGTGGTCATGACAAGCATGTTCCTCCTGAGAAGGA	9	-	65261746-65261795	9qC	Mus musculus organic solute transporter beta (Ostb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IPI]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199208	ILMN_260266	GM12	XM_916126.2	XM_916126.2		192852	94390744	XM_916126.2	Gm12	XP_921219.1	ILMN_1221722	006480600	S	739	TGGCCCTGTTAGTCACCATGGGGGGCTGGCTGACACTGGTAGTGGCTTAT				11qD	PREDICTED: Mus musculus gene model 12, (NCBI) (Gm12), mRNA.					
Mus musculus	Riken	ILMN_204394	ILMN_204394	9930024G20RIK	ri|9930024G20|PX00120O10|AK036917|1808					AK036917	9930024G20Rik		ILMN_2564644	005560538	S	1736	TGACATTCAGAGGGAGGGGGGAGGGGGGACACACTTCCTTTATGACCCAG										
Mus musculus	RefSeq	ILMN_218428	ILMN_218428	MCM4	NM_008565.2	NM_008565.2		17217	31982196	NM_008565.2	Mcm4	NP_032591.2	ILMN_2752010	006130288	S	110	TACGAGAGGTCCCGGAGCGGGACAACTGAGAGCCAGATTTCTTTTGTCGC	16	-	15637290-15637339	16qA2	Mus musculus minichromosome maintenance deficient 4 homolog (S. cerevisiae) (Mcm4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IPI]	mcdc21; KIAA4003; AI325074; 19G; Mcmd4; Cdc21; mKIAA4003; AU045576	mcdc21; KIAA4003; AI325074; 19G; Mcmd4; Cdc21; mKIAA4003; AU045576
Mus musculus	RefSeq	ILMN_218428	ILMN_218428	MCM4	NM_008565.2	NM_008565.2		17217	31982196	NM_008565.2	Mcm4	NP_032591.2	ILMN_2752009	005270382	S	108	GTACGAGAGGTCCCGGAGCGGGACAACTGAGAGCCAGATTTCTTTTGTCG	16	-	15637292-15637341	16qA2	Mus musculus minichromosome maintenance deficient 4 homolog (S. cerevisiae) (Mcm4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IPI]	mcdc21; KIAA4003; AI325074; 19G; Mcmd4; Cdc21; mKIAA4003; AU045576	mcdc21; KIAA4003; AI325074; 19G; Mcmd4; Cdc21; mKIAA4003; AU045576
Mus musculus	RefSeq	ILMN_218428	ILMN_218428	MCM4	NM_008565.2	NM_008565.2		17217	31982196	NM_008565.2	Mcm4	NP_032591.2	ILMN_2936427	002320368	S	3106	TGTCCTTACTGTGTGGAGCATTGTGTGCTTGGTATAACTGGCAGCCGTAC	16	-	15624379-15624428	16qA2	Mus musculus minichromosome maintenance deficient 4 homolog (S. cerevisiae) (Mcm4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IPI]	mcdc21; KIAA4003; AI325074; 19G; Mcmd4; Cdc21; mKIAA4003; AU045576	mcdc21; KIAA4003; AI325074; 19G; Mcmd4; Cdc21; mKIAA4003; AU045576
Mus musculus	RefSeq	ILMN_198982	ILMN_239543	AU019823	NM_212449.1	NM_212449.1		270156	47059060	NM_212449.1	AU019823	NP_997614.1	ILMN_1252221	002060500	S	816	TGACCCTGAGGTACAGGAGAGGACAAGCAAGCGCAGGAACTGGAAGGTGG	9	-	50415577-50415626	9qA5.3	Mus musculus expressed sequence AU019823 (AU019823), mRNA.				Gm639	Gm639
Mus musculus	RefSeq	ILMN_239543	ILMN_239543	AU019823	NM_212449.1	NM_212449.1		270156	47059060	NM_212449.1	AU019823	NP_997614.1	ILMN_2875915	004890328	S	2354	GCCAGATGTGCCCTATCCCTTGATTATGAGCAGGTGCCGCCTTTTGGGGT	9	-	50414039-50414088	9qA5.3	Mus musculus expressed sequence AU019823 (AU019823), mRNA.				Gm639	Gm639
Mus musculus	MEEBO	ILMN_196239	ILMN_196239	C030003H22RIK	scl0100146.1_170						C030003H22Rik		ILMN_1216024	006760292	S	11	GGCCTCCATAACTCCTGTATGTTTTGACCTTCCTTCCTCCATGCATGCAG										
Mus musculus	RefSeq	ILMN_201199	ILMN_329907	LOC100047265	XM_001478097.1	XM_001478097.1		100047265	149259548	XM_001478097.1	LOC100047265	XP_001478147.1	ILMN_1248985	005720240	S	420	CACAGGGCAGTCTGGTACTCCTTGCCCCCATCGGCTGTAGGACCTTGTAC					PREDICTED: Mus musculus hypothetical protein LOC100047265 (LOC100047265), mRNA.					
Mus musculus	RefSeq	ILMN_188425	ILMN_252197	LOC671209	XM_985508.1	XM_985508.1		671209	94395859	XM_985508.1	LOC671209	XP_990602.1	ILMN_2452565	006980053	S	125	CCATTGTGCACTGGTACCAACTGAAAGAAGGGGAGCCCCTGAGACGAATC					PREDICTED: Mus musculus similar to T-cell receptor gamma chain V region V108A precursor (LOC671209), mRNA.					
Mus musculus	RefSeq	ILMN_210969	ILMN_210969	STARD7	NM_139308.1	NM_139308.1		99138	21314859	NM_139308.1	Stard7	NP_647469.2	ILMN_2789125	003990201	S	2660	TGCTTGCTACCTACCCTGTTGTGGTGTTAAAAGAGACTAAACCCAAGGTG	2	+	127124222-127124271	2qF1	Mus musculus START domain containing 7 (Stard7), mRNA.				AL022671; AW544915; MGC27663; AI852671	AL022671; AW544915; MGC27663; AI852671
Mus musculus	RefSeq	ILMN_210969	ILMN_210969	STARD7	NM_139308.1	NM_139308.1		99138	21314859	NM_139308.1	Stard7	NP_647469.2	ILMN_2676066	003180367	S	2455	GTAGGGATGGGGCTTTTGTGACCTCTTGGTCTTGTAAAGCATTTCTCTCC	2	+	127124017-127124066	2qF1	Mus musculus START domain containing 7 (Stard7), mRNA.				AL022671; AW544915; MGC27663; AI852671	AL022671; AW544915; MGC27663; AI852671
Mus musculus	RefSeq	ILMN_210969	ILMN_210969	STARD7	NM_139308.1	NM_139308.1		99138	21314859	NM_139308.1	Stard7	NP_647469.2	ILMN_2611159	006370477	S	147	AACGGCGCTCTCCTCGGAAGCCACGCTACCTCAGCCGCTTCTGCAAAAAG	2	+	127096121-127096170	2qF1	Mus musculus START domain containing 7 (Stard7), mRNA.				AL022671; AW544915; MGC27663; AI852671	AL022671; AW544915; MGC27663; AI852671
Mus musculus	MEEBO	ILMN_209553	ILMN_209553	LUZP1	scl0002809.1_7	NM_024452.1			19387849	NM_024452.1	Luzp1		ILMN_2596903	002320221	S	78	GCCACGCACAGCAGGCAGCAATGAACATAGTCAACTTCCCCACTCCATGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_213870	ILMN_213870	MCPT2	NM_008571.1	NM_008571.1		17225	6678837	NM_008571.1	Mcpt2	NP_032597.1	ILMN_2641659	006450692	S	734	CCCTGGATATATAAAGTCTTAAAGAGCAAGTAGCTGAAAAGCCTAACCAG	14	+	56663234-56663266:56663267-56663283	14qC3	Mus musculus mast cell protease 2 (Mcpt2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MMCP-2; Mcp-2	MMCP-2; Mcp-2
Mus musculus	MEEBO	ILMN_185939	ILMN_185939	A030010B05RIK	scl38272.5_429				27753956	NM_030100	A030010B05Rik		ILMN_1252682	003940731	S	6	GGTGGGAGTCTGTTAGCGATCTGAGGCTGAGGGTATAGCAGTACCCATGT										
Mus musculus	RefSeq	ILMN_209640	ILMN_209640	HTR3B	NM_020274.2	NM_020274.2		57014	31542978	NM_020274.2	Htr3b	NP_064670.1	ILMN_2791935	005890762	S	1963	GCTTGGCTTAAGCCCTGCTCAAACCTGCTTAAATCCTCCAGGTTCATCAA	9	-	48687338-48687387	9qA5.3	Mus musculus 5-hydroxytryptamine (serotonin) receptor 3B (Htr3b), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of a serotonin receptor binding to one of its physiological ligands [goid 7210] [evidence IDA]; The series of molecular signals generated as a consequence of a serotonin receptor binding to one of its physiological ligands [goid 7210] [evidence ISS]	Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence IDA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISS];  [goid 5232] [evidence IDA];  [goid 5232] [evidence ISS]	5-HT3B	5-HT3B
Mus musculus	RefSeq	ILMN_199993	ILMN_199993	LOC381627	XM_355586.1	XM_355586.1			38079605	XM_355586.1	LOC381627		ILMN_2537214	006770730	S	870	GGAGAAGCAGAAAGTGGGACTCGGGGAAATAAAGGGACTAAGAAAGTGCG										
Mus musculus	RefSeq	ILMN_209195	ILMN_209195	MTMR14	NM_026849.1	NM_026849.1		97287	39930426	NM_026849.1	Mtmr14	NP_081125.1	ILMN_2689062	007210471	S	906	CCCCATTGAACATCCCCAACTTCCTGACTCAATCTCTGAACATTGACTGG	6	+	113211213-113211262	6qE3	Mus musculus myotubularin related protein 14 (Mtmr14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1110061O04Rik; AW553738; C76151	1110061O04Rik; AW553738; C76151
Mus musculus	RefSeq	ILMN_209195	ILMN_209195	MTMR14	NM_026849.1	NM_026849.1		97287	39930426	NM_026849.1	Mtmr14	NP_081125.1	ILMN_2975375	002030377	S	2271	AGAATTGTGTTGGAGGGTACAGGGGCGTTCCCAGGGCCTCATGGAGATTA	6	+	113231031-113231080	6qE3	Mus musculus myotubularin related protein 14 (Mtmr14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1110061O04Rik; AW553738; C76151	1110061O04Rik; AW553738; C76151
Mus musculus	RefSeq	ILMN_209195	ILMN_209195	MTMR14	NM_026849.1	NM_026849.1		97287	39930426	NM_026849.1	Mtmr14	NP_081125.1	ILMN_1258996	004200373	S	2353	GTTTCCTGGGAAGGAGAATCACCTGCACTGAAAATGAGGCAATTTCACAC	6	+	113231113-113231162	6qE3	Mus musculus myotubularin related protein 14 (Mtmr14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1110061O04Rik; AW553738; C76151	1110061O04Rik; AW553738; C76151
Mus musculus	RefSeq	ILMN_209195	ILMN_209195	MTMR14	NM_026849.1	NM_026849.1		97287	39930426	NM_026849.1	Mtmr14	NP_081125.1	ILMN_2617505	001770577	S	502	GGCCACACTGGCTGGATGGGGAGAGCTATATGGACGCTCGGGATACAACT	6	+	113203739-113203788	6qE3	Mus musculus myotubularin related protein 14 (Mtmr14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1110061O04Rik; AW553738; C76151	1110061O04Rik; AW553738; C76151
Mus musculus	RefSeq	ILMN_209195	ILMN_209195	MTMR14	NM_026849.1	NM_026849.1		97287	39930426	NM_026849.1	Mtmr14	NP_081125.1	ILMN_2975377	006960482	S	2333	AACCCCATTCTGCAATTTTTGTTTCCTGGGAAGGAGAATCACCTGCGCTG	6	+	113231093-113231142	6qE3	Mus musculus myotubularin related protein 14 (Mtmr14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1110061O04Rik; AW553738; C76151	1110061O04Rik; AW553738; C76151
Mus musculus	RefSeq	ILMN_217885	ILMN_217885	2310065K24RIK	NM_028221.2	NM_028221.2		102122	31560082	NM_028221.2	2310065K24Rik	NP_082497.2	ILMN_1254027	002140064	S	1627	CATCCAGCCTGAGGAGGTAGGAAGGAGCTGACCACGAGAACATGACCATC	8	-	97098916-97098965	8qC5	Mus musculus RIKEN cDNA 2310065K24 gene (2310065K24Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1700001O11Rik; AI596259	1700001O11Rik; AI596259
Mus musculus	RefSeq	ILMN_197514	ILMN_197514	LOC380915	XM_354826.1	XM_354826.1			38076382	XM_354826.1	LOC380915		ILMN_2528401	006960132	S	533	GTGCACTCTACAGCAAATTAGAACGGTTATCTACTGAAATAAATTCTATG										
Mus musculus	MEEBO	ILMN_187055	ILMN_187055	SCL0001544.1_68	scl0001544.1_68	AK029003.1			26324961	AK029003.1	scl0001544.1_68		ILMN_2440776	000380162	S	20	TCCTGAATGGGGGAGCAGCGTTCCACTGCGCCAGGACCTATGGCAACAAA										
Mus musculus	MEEBO	ILMN_187055	ILMN_187055	SCL0001544.1_68	scl0001544.1_68	AK029003.1			26324961	AK029003.1	scl0001544.1_68		ILMN_2553947	003360037	S	2455	CAGGCCCATGTCAGCTGCAGAGACCGTGGCTAGAAATGTGATCAGACAAG										
Mus musculus	Riken	ILMN_204372	ILMN_204372	9430007M11RIK	ri|9430007M11|PX00108E09|AK034571|2793					AK034571	9430007M11Rik		ILMN_1260234	000620653	S	2657	CTCACTCTGTAGCCTAGATTTCCTTCAACTCAGAATCCTCCTGCCTCGGC										
Mus musculus	RefSeq	ILMN_212431	ILMN_212431	CDS2	NM_138651.5	NM_138651.5		110911	146149323	NM_138651.5	Cds2	NP_619592.1	ILMN_2626359	004730348	S	3862	CCCGTGTTTGTCACTTGTTGTGTGGTTTTATGTTTCCCGCTGTGTGAGCA				2qF2	Mus musculus CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 (Cds2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol [goid 4605] [evidence IEA]	AI854580; 5730460C18Rik; 5730450N06Rik; D2Wsu127e	AI854580; 5730460C18Rik; 5730450N06Rik; D2Wsu127e
Mus musculus	MEEBO	ILMN_217646	ILMN_217646	HTRA3	scl078558.1_26	NM_030127.1			14994304	NM_030127.1	Htra3		ILMN_2718401	000780546	S	2259	GACTACACGGTGGCCAAAGAGGAGCGGACACCTGCCTGAGGTGCAAGGAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187391	ILMN_187391	UBE2D3	NM_025356.4	NM_025356.4		66105	146134970	NM_025356.4	Ube2d3	NP_079632.1	ILMN_2443725	001190504	S	2299	ACTGCTTATATTTACGTGCAATCTTATTCCTTGTCCGCACACAGATGTGG				3qG3	Mus musculus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (Ube2d3), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	AA414951; 9430029A22Rik; 1100001F19Rik	AA414951; 9430029A22Rik; 1100001F19Rik
Mus musculus	MEEBO	ILMN_191929	ILMN_191929	ZFP64	scl0003200.1_356				13435647	BC004695	Zfp64		ILMN_2483491	005420168	S	13	AAGCGGCCCAGCAGCCTGGCCAAACACATCGATAAGGTGCACAGAGAAGG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200924	ILMN_200924	LOC382258	XM_356370.1	XM_356370.1			38087100	XM_356370.1	LOC382258		ILMN_2540484	000380367	S	213	CCATGTCCATTGTGAGGGGCAATGGAGGAAGCAGAGGCAATTTGGGGGCT										
Mus musculus	MEEBO	ILMN_221255	ILMN_221255	BC022713	scl30054.1.2015_92	NM_177761.2			31343091	NM_177761.2	BC022713		ILMN_1221574	001110646	S	921	CCCATATGTCCCCTCTCCTGAATGTGACCTGAGTGGCCCTGGGAAAGCAA										
Mus musculus	RefSeq	ILMN_210671	ILMN_210671	GCLC	NM_010295.1	NM_010295.1		14629	33468896	NM_010295.1	Gclc	NP_034425.1	ILMN_2608016	007200133	S	1844	GTCCAGAGTTACTTGGATCAGGATTTAGAAAAGCGAAGTACAGTGGAGGT	9	+	77640988-77641037	9qE1	Mus musculus glutamate-cysteine ligase, catalytic subunit (Gclc), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; An enzyme complex that catalyzes the ligation of glutamate to cysteine, forming glutamylcysteine [goid 17109] [evidence IDA]	The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IMP]; The chemical reactions and pathways involving L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 19852] [evidence IMP]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31397] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32436] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides [goid 46685] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a xenobiotic compound stimulus. Xenobiotic compounds are compounds foreign to living organisms [goid 9410] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that modulates the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51900] [evidence IGI]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Catalysis of the reaction: ATP + L-glutamate + L-cysteine = ADP + phosphate + gamma-L-glutamyl-L-cysteine [goid 4357] [evidence IDA]; Catalysis of the reaction: ATP + L-glutamate + L-cysteine = ADP + phosphate + gamma-L-glutamyl-L-cysteine [goid 4357] [evidence IMP]	Ggcs-hs; D9Wsu168e; Glclc; GLCL-H	Ggcs-hs; D9Wsu168e; Glclc; GLCL-H
Mus musculus	RefSeq	ILMN_217027	ILMN_217027	TBX22	NM_145224.1	NM_145224.1		245572	21644588	NM_145224.1	Tbx22	NP_660259.1	ILMN_2706930	007100064	S	4969	AAAAGGGTTACAAGAGTTAAAGTTAAATATGATAGAAAATTCTGACAGTA	X	+	104884066-104884115	XqD	Mus musculus T-box 22 (Tbx22), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	D230020M15Rik	D230020M15Rik
Mus musculus	RefSeq	ILMN_220186	ILMN_220186	KCTD2	NM_183285.2	NM_183285.2		70382	53829371	NM_183285.2	Kctd2	NP_899108.2	ILMN_1226528	004070746	S	1657	GTGGACGCTGCCAAATGTGTCATATTGTCATAGCTAAAAGTGGTGGTGTG	11	+	115292503-115292552	11qE2	Mus musculus potassium channel tetramerisation domain containing 2 (Kctd2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	2310012I15Rik	2310012I15Rik
Mus musculus	RefSeq	ILMN_211248	ILMN_211248	PEX16	NM_145122.1	NM_145122.1		18633	21553068	NM_145122.1	Pex16	NP_660104.1	ILMN_2812824	007550056	S	1014	GGCAAGGCCGCTCATGGACTACTTGCCCTCCTGGCAGAAAATCTATTTCT	2	+	92220627-92220631:92221193-92221237	2qE1	Mus musculus peroxisome biogenesis factor 16 (Pex16), mRNA.	The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [evidence ISO]	The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212862	ILMN_212862	MSH6	NM_010830.1	NM_010830.1		17688	6754743	NM_010830.1	Msh6	NP_034960.1	ILMN_2631098	001230315	S	4097	GGTGAAGCTATCCATAGGCTGCTGGCCTTGATTAACGGATTGTAGACTAC	17	+	88390100-88390145:88390146-88390149	17qE4	Mus musculus mutS homolog 6 (E. coli) (Msh6), mRNA.	A heterodimer involved in the recognition and repair of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MSH2 and MSH6 [goid 32301] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IDA]	Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA recombination [goid 45910] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]	Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence IDA]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with damaged DNA [goid 3684] [evidence IMP]; Interacting selectively with damaged DNA [goid 3684] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Gtmbp; GTBP; AW550279; AU044881	Gtmbp; GTBP; AW550279; AU044881
Mus musculus	RefSeq	ILMN_212862	ILMN_212862	MSH6	NM_010830.1	NM_010830.1		17688	6754743	NM_010830.1	Msh6	NP_034960.1	ILMN_2631097	007610338	S	4097	CGGTGAAGCTATCCATAGGCTGCTGGCCTTGATTAACGGATTGTAGACTA	17	+	88390100-88390145:88390146-88390149	17qE4	Mus musculus mutS homolog 6 (E. coli) (Msh6), mRNA.	A heterodimer involved in the recognition and repair of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MSH2 and MSH6 [goid 32301] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IDA]	Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA recombination [goid 45910] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]	Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence IDA]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with damaged DNA [goid 3684] [evidence IMP]; Interacting selectively with damaged DNA [goid 3684] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Gtmbp; GTBP; AW550279; AU044881	Gtmbp; GTBP; AW550279; AU044881
Mus musculus	RefSeq	ILMN_199126	ILMN_254637	EG237749	XM_908360.3	XM_908360.3		237749	149262053	XM_908360.3	EG237749	XP_913453.3	ILMN_1238824	002350014	S	1023	GGGATCTCTGAGCTTCCCTGTGTCTAAGATCAGACCTTTGCAGAACACAG				11qB1.1	PREDICTED: Mus musculus predicted gene, EG237749 (EG237749), mRNA.					
Mus musculus	RefSeq	ILMN_214031	ILMN_214031	DEPDC7	NM_144804.1	NM_144804.1		211896	21450164	NM_144804.1	Depdc7	NP_659053.1	ILMN_2643470	001660358	S	1610	GTATTTTAAGGGCAGATTATGTAGCCTAAAGAAATTTTAAGCTTGGATGT	2	-	104562005-104562054	2qE2	Mus musculus DEP domain containing 7 (Depdc7), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		RP24-297H17.8; MGC19163; AV216087	RP24-297H17.8; MGC19163; AV216087
Mus musculus	RefSeq	ILMN_218730	ILMN_218730	CCDC66	NM_177111.3	NM_177111.3		320234	118200349	NM_177111.3	Ccdc66	NP_796085.3	ILMN_2699509	003610463	S	2206	GGAGCTGCTTCACTTAGTGGAGAGAAACAATCCCGAGAATCTCTCCCAAA	14	-	28299722-28299771	14qA3	Mus musculus coiled-coil domain containing 66 (Ccdc66), mRNA.				E230015L20Rik	E230015L20Rik
Mus musculus	MEEBO	ILMN_215366	ILMN_215366	DNM	scl013429.1_38	NM_010065.1			33859537	NM_010065.1	Dnm		ILMN_1214326	007330307	S	1327	AAGATTCGAGAGCCGTGTCTCAAGTGTGTGGACATGGTTATCTCGGAGCT										
Mus musculus	MEEBO	ILMN_185204	ILMN_185204	IGKV2-112_J00562_IG_KAPPA_VARIABLE_2-112_55	IGKV2-112_J00562_Ig_kappa_variable_2-112_55						IGKV2-112_J00562_Ig_kappa_variable_2-112_55		ILMN_2425048	000010148	S	20	CTCCTTTCAGGAGTCAGTGGGGATATTGTGATAACCCAGGATGAACTCTC										
Mus musculus	MEEBO	ILMN_211691	ILMN_211691	NASP	scl0002679.1_1	NM_016777.2			13384597	NM_016777.2	Nasp		ILMN_2756008	000610743	S	2009	AAGACGCAAAGGAATCTCAGCGGAGTGGGAATGTAGCCGAACTGGCACTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits [goid 43486] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IDA]; Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215410	ILMN_239334	HDAC5	NM_001077696.1	NM_001077696.1		15184	118136294	NM_001077696.1	Hdac5	NP_001071164.1	ILMN_2659160	007570050	S	3364	ATGACTTGACCGCCATCTGTGATGCCTCTGAGGCCTGTGTCTCGGCTCTG	11	-	102057864-102057913	11qD	Mus musculus histone deacetylase 5 (Hdac5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	mKIAA0600; mHDA1; AI426555; Hdac4	mKIAA0600; mHDA1; AI426555; Hdac4
Mus musculus	RefSeq	ILMN_215410	ILMN_239334	HDAC5	NM_001077696.1	NM_001077696.1		15184	118136294	NM_001077696.1	Hdac5	NP_001071164.1	ILMN_1213290	003290014	S	2579	CTCTGAGTACCACACCCTGCTCTATGGGACCAGCCCCCTTAACCGGCAGA	11	-	102061306-102061355	11qD	Mus musculus histone deacetylase 5 (Hdac5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	mKIAA0600; mHDA1; AI426555; Hdac4	mKIAA0600; mHDA1; AI426555; Hdac4
Mus musculus	RefSeq	ILMN_239334	ILMN_239334	HDAC5	NM_001077696.1	NM_001077696.1		15184	118136294	NM_001077696.1	Hdac5	NP_001071164.1	ILMN_3112922	001820551	A	3463	CCAGCGTCAATGCGGTTGCCACACTAGAGAAAGTCATCGAGATCCAGAGC	11	-	102057429-102057431:102057552-102057598	11qD	Mus musculus histone deacetylase 5 (Hdac5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	mKIAA0600; mHDA1; AI426555; Hdac4	mKIAA0600; mHDA1; AI426555; Hdac4
Mus musculus	RefSeq	ILMN_260477	ILMN_260477	OLFR1287	NM_001011773.1	NM_001011773.1		257935	58801321	NM_001011773.1	Olfr1287	NP_001011773.1	ILMN_2979729	002940424	S	768	CATCTATCTGTGTCCAGTTAGCATCACCTGGGTTGACAACTTTCTTGCCG	2	+	111290066-111290115	2qE3	Mus musculus olfactory receptor 1287 (Olfr1287), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR248-15	MOR248-15
Mus musculus	RefSeq	ILMN_215838	ILMN_215838	SPERT	NM_026457.1	NM_026457.1		67926	13385951	NM_026457.1	Spert	NP_080733.1	ILMN_2899578	005290528	S	1343	AAGGGCCATCCTACACCTGACACACAATAAAGACAGAGGAGGCTGGGGCC	14	-	75982700-75982749	14qD3	Mus musculus spermatid associated (Spert), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI596460; Nurit; 1700086N05Rik; MGC129307	AI596460; Nurit; 1700086N05Rik; MGC129307
Mus musculus	RefSeq	ILMN_208996	ILMN_208996	PLCH1	NM_183191.2	NM_183191.2		269437	142387787	NM_183191.2	Plch1	NP_899014.1	ILMN_2591569	002360372	S	6115	ATTTTAGTACCGACATATATTATTTTCATTGTGGATCCATTTTTTATTGC	3	-	63500250-63500299	3qE1	Mus musculus phospholipase C, eta 1 (Plch1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]; Catalysis of the reaction: a phosphatidylcholine + H2O = 1,2-diacylglycerol + choline phosphate; requires Ca2+ [goid 50429] [evidence ISA]	MGC57096; PLCeta1; Plcl3; BC042549	MGC57096; PLCeta1; Plcl3; BC042549
Mus musculus	RefSeq	ILMN_221148	ILMN_221148	ESPN	NM_019585.3	NM_019585.3		56226	111494246	NM_019585.3	Espn	NP_062531.2	ILMN_3076219	003130202	I	105	CCAAGAGCCACCATGAACTCCCAGGGGCCTCTAGGTGGGGGCCATATACC	4	-	151502880-151502918:151502919-151502929	4qE2	Mus musculus espin (Espn), transcript variant 6, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence TAS]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence ISO]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Assembly of actin filament bundles in which the filaments are tightly packed (approximately 10-20 nm apart) and oriented with the same polarity [goid 30046] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; The assembly of a network of actin filaments; actin filaments on different axes and with differing orientations are crosslinked together to form a mesh of filaments [goid 51639] [evidence NAS]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	je	je
Mus musculus	MEEBO	ILMN_195224	ILMN_195224	DACH1	scl45222.12_39				6681128	NM_007826	Dach1		ILMN_2720341	005090224	S	2162	TGAGATAGAAGCTGACCGCAGCGGAGGGAGAGCAGATGCTGAAAGGACAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195224	ILMN_195224	DACH1	scl45222.12_39				6681128	NM_007826	Dach1		ILMN_2720338	003450291	S	2161	CTGAGATAGAAGCTGACCGCAGCGGAGGGAGAGCAGATGCTGAAAGGACA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198973	ILMN_325391	LOC244710	XR_031556.1	XR_031556.1		244710	149259832	XR_031556.1	LOC244710		ILMN_1221874	001780047	S	1128	TATCCTGAACCAGGCAGGCCAAATTAGTGCTGGCAATGCTCCTGTTCTGC	9	+	17538028-17538077	9qA2	PREDICTED: Mus musculus similar to eukaryotic translation elongation factor 1 alpha 1 (LOC244710), misc RNA.					
Mus musculus	RefSeq	ILMN_210767	ILMN_210767	RPN2	NM_019642.3	NM_019642.3		20014	35215296	NM_019642.3	Rpn2	NP_062616.2	ILMN_2949266	007050092	S	2318	GGGCCCAGATTGTCTGTCCCTTTGTCTTGATGCCTGGCAAGATGCTGTGA	2	+	157017361-157017410	2qH1	Mus musculus ribophorin II (Rpn2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected [goid 8250] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AV261018; Rpn-2; 1300012C06Rik	AV261018; Rpn-2; 1300012C06Rik
Mus musculus	RefSeq	ILMN_216250	ILMN_309967	1500032D16RIK	NM_001083891.1	NM_001083891.1		78330	140969945	NM_001083891.1	1500032D16Rik	NP_001077360.1	ILMN_2668977	006180092	S	363	CAAATTCAGGCTGCCACAGCCGTCTTCAGGACGAGAGTCACCTCGGCACT	17	+	31668146-31668195	17qB1	Mus musculus RIKEN cDNA 1500032D16 gene (1500032D16Rik), transcript variant 2, mRNA.					
Mus musculus	RefSeq	ILMN_221333	ILMN_221333	EXTL2	NM_021388.3	NM_021388.3		58193	142356073	NM_021388.3	Extl2	NP_067363.2	ILMN_1213855	004880161	S	2717	AGGAGAATACTGACCACCCAAGTTCCACTGCAAGACCTTCCCGCCGTCAG	3	+	115731667-115731716	3qG1	Mus musculus exostoses (multiple)-like 2 (Extl2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan = UDP + alpha-N-acetyl-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan [goid 1888] [evidence IEA]	3000001D04Rik; AW146439	3000001D04Rik; AW146439
Mus musculus	RefSeq	ILMN_216052	ILMN_216052	G3BP2	NM_011816.3	NM_011816.3		23881	124248573	NM_011816.3	G3bp2	NP_035946.2	ILMN_1251970	001030348	S	1880	GCTAGACTTGGAGAATTAAGGACTGAGAAATGACCATATCTTAAACTGTC	5	-	92483557-92483606	5qE2	Mus musculus GTPase activating protein (SH3 domain) binding protein 2 (G3bp2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AA409541; KIAA0660; E430034L04Rik; mKIAA0660; G3BP	AA409541; KIAA0660; E430034L04Rik; mKIAA0660; G3BP
Mus musculus	RefSeq	ILMN_216052	ILMN_216052	G3BP2	NM_011816.3	NM_011816.3		23881	124248573	NM_011816.3	G3bp2	NP_035946.2	ILMN_2691815	000050678	S	993	GCCTCCTAGTGGTACTGTTTCTTCCTCTGGAATTCCACCCCATGTTAAAG	5	-	92492376-92492425	5qE2	Mus musculus GTPase activating protein (SH3 domain) binding protein 2 (G3bp2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AA409541; KIAA0660; E430034L04Rik; mKIAA0660; G3BP	AA409541; KIAA0660; E430034L04Rik; mKIAA0660; G3BP
Mus musculus	RefSeq	ILMN_216052	ILMN_216052	G3BP2	NM_011816.3	NM_011816.3		23881	124248573	NM_011816.3	G3bp2	NP_035946.2	ILMN_2666747	004230681	S	1662	CACAGGACAGCGTCGTTGAAGTCCCACTGTTGGCAGTTTTGGCAGTGGTA	5	-	92483775-92483806:92483807-92483824	5qE2	Mus musculus GTPase activating protein (SH3 domain) binding protein 2 (G3bp2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AA409541; KIAA0660; E430034L04Rik; mKIAA0660; G3BP	AA409541; KIAA0660; E430034L04Rik; mKIAA0660; G3BP
Mus musculus	Riken	ILMN_202333	ILMN_202333	SUFU	ri|4930524I10|PX00033P21|AK015885|1851					AK015885	Sufu		ILMN_1230597	002750301	S	1671	ACCTCGCCTGCCTGGGTGGAAATTGCTCGGGCTAGGGTGGAAAAGGAGTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IMP]; The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 42994] [evidence IGI]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221097	ILMN_221097	PSME2	NM_011190.3	NM_011190.3		19188	71725356	NM_011190.3	Psme2	NP_035320.1	ILMN_2731057	001240072	S	73	AGTGAAAGCGAAAGCTGGGGCTGCTAGCCCAGGCTCGAGAGCTGCCAAGT	14	-	56209940-56209989	14qC3	Mus musculus proteasome (prosome, macropain) 28 subunit, beta (Psme2), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex that activates the hydrolysis of small nonubiquitinated peptides by binding to the proteasome core complex [goid 8537] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) of exogenous origin on its cell surface in association with an MHC protein complex [goid 19884] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the activation of the proteasome, a large multisubunit complex which performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis [goid 8538] [evidence IPI]	PA28b; AA589371; AI788882	PA28b; AA589371; AI788882
Mus musculus	RefSeq	ILMN_211203	ILMN_211203	ECHDC2	NM_026728.1	NM_026728.1		52430	21312019	NM_026728.1	Echdc2	NP_081004.1	ILMN_2846194	007150161	S	996	ACTGCCACCTTCCATACTGCTCACCTTGGCTAGTGACTGGACTCTCTGCA	4	+	107676988-107677037	4qC7	Mus musculus enoyl Coenzyme A hydratase domain containing 2 (Echdc2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2610009M20Rik; D4Ertd765e; 1300017C12Rik	2610009M20Rik; D4Ertd765e; 1300017C12Rik
Mus musculus	RefSeq	ILMN_211203	ILMN_211203	ECHDC2	NM_026728.1	NM_026728.1		52430	21312019	NM_026728.1	Echdc2	NP_081004.1	ILMN_2846198	002650537	S	898	CGAGCTCCCAAATTTGTGGGCAAGTGACCCAGCTAACTTTAAGCACACAC	4	+	107676890-107676916:107676917-107676939	4qC7	Mus musculus enoyl Coenzyme A hydratase domain containing 2 (Echdc2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2610009M20Rik; D4Ertd765e; 1300017C12Rik	2610009M20Rik; D4Ertd765e; 1300017C12Rik
Mus musculus	RefSeq	ILMN_212414	ILMN_253341	FBLN2	NM_001081437.1	NM_001081437.1		14115	124517692	NM_001081437.1	Fbln2	NP_001074906.1	ILMN_1245307	004230228	S	3766	TAACTTAATCATGCTGAGCTGGTTGGTCTTGAGTCTCTACCCTAGAGGGA	6	+	91221964-91222013	6qD1	Mus musculus fibulin 2 (Fbln2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5730577E14Rik	5730577E14Rik
Mus musculus	RefSeq	ILMN_253341	ILMN_253341	FBLN2	NM_001081437.1	NM_001081437.1		14115	124517692	NM_001081437.1	Fbln2	NP_001074906.1	ILMN_3132949	006040521	A	3860	CGAGGCTAGATGGTGACCTGCAAACTGGAAACAGCCATAGGGGGCTTCTG	6	+	91222058-91222107	6qD1	Mus musculus fibulin 2 (Fbln2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5730577E14Rik	5730577E14Rik
Mus musculus	Riken	ILMN_204511	ILMN_204511	B230337C21RIK	ri|B230337C21|PX00160G21|AK046037|1609					AK046037	B230337C21Rik		ILMN_2565539	002480224	S	1348	GCTGTGACAGGCCTGACCATGCTTCTTGTTGGTGGAATATGTGCTCTTTG										
Mus musculus	RefSeq	ILMN_212920	ILMN_212920	1200016B10RIK	NM_025819.3	NM_025819.3		66875	142347972	NM_025819.3	1200016B10Rik	NP_080095.2	ILMN_2631656	007150719	S	639	CTGTAGACCAGACAAAGGAAAAGAATTGGCCTTCTTTGCTTATTCAGAAG	1	-	153258311-153258360	1qG2	Mus musculus RIKEN cDNA 1200016B10 gene (1200016B10Rik), mRNA.				C1orf26	C1orf26
Mus musculus	RefSeq	ILMN_212920	ILMN_212920	1200016B10RIK	NM_025819.3	NM_025819.3		66875	142347972	NM_025819.3	1200016B10Rik	NP_080095.2	ILMN_1236716	002760240	S	3339	GGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTCTGATGC	1	-	153215054-153215103	1qG2	Mus musculus RIKEN cDNA 1200016B10 gene (1200016B10Rik), mRNA.				C1orf26	C1orf26
Mus musculus	RefSeq	ILMN_212665	ILMN_212665	FGFBP3	NM_028263.1	NM_028263.1		72514	33859717	NM_028263.1	Fgfbp3	NP_082539.2	ILMN_2628999	001430343	S	1166	GAAGTGACTAAAGAGGTGAGAATCTTTCCTAGGAAGTGGGATACAATGTA	19	-	36992580-36992629	19qC2	Mus musculus fibroblast growth factor binding protein 3 (Fgfbp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]	2610306H15Rik; Fgf-bp3	2610306H15Rik; Fgf-bp3
Mus musculus	RefSeq	ILMN_212665	ILMN_212665	FGFBP3	NM_028263.1	NM_028263.1		72514	33859717	NM_028263.1	Fgfbp3	NP_082539.2	ILMN_2841593	003130661	S	1600	TCAGCTAAAATGTAAACACGTATCTGGGTCATTTGGCCCTTCATCTCTTC	19	-	36992146-36992195	19qC2	Mus musculus fibroblast growth factor binding protein 3 (Fgfbp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]	2610306H15Rik; Fgf-bp3	2610306H15Rik; Fgf-bp3
Mus musculus	Riken	ILMN_203370	ILMN_203370	CATNAL1	ri|9330185P03|PX00107M15|AK034393|1957					AK034393	Catnal1		ILMN_2556789	004220047	S	757	ATGATGCTCCTTACAGCCTCAAAGTGAGGAGAGGCGGCTGGGGGAGCCAG										
Mus musculus	RefSeq	ILMN_200697	ILMN_200697	LOC384490	XM_357670.1	XM_357670.1			38085278	XM_357670.1	LOC384490		ILMN_2539682	006560133	S	591	TGCACTGAGCAAATATGGACGGGTAAAGCGGGGCAGCAAGGTGTCCCCAA										
Mus musculus	RefSeq	ILMN_207345	ILMN_252529	ZDHHC9	XM_983438.1	XM_983438.1		208884	94407152	XM_983438.1	Zdhhc9	XP_988532.1	ILMN_1228271	001050427	S	1284	CACACTTGTGCTATGTGCTGGAAGTCCTGCCCTCCTGTTTCAGTGAAGGC				XqA4	PREDICTED: Mus musculus zinc finger, DHHC domain containing 9, transcript variant 8 (Zdhhc9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216303	ILMN_216303	2810407A14RIK	scl0070211.1_119	NM_175156.2			31340995	NM_175156.2	2810407A14Rik		ILMN_2669543	003830307	S	1434	GAAGTTACACATCACAGGGGAGTGTGAAAAATGGTGGACGGCCCAGGGAG										
Mus musculus	RefSeq	ILMN_218269	ILMN_218269	ANKK1	NM_172922.3	NM_172922.3		244859	146198787	NM_172922.3	Ankk1	NP_766510.1	ILMN_1221654	001170605	S	2497	GCTGGAGAAGCTACTGACTGCCTGGGAAACTGATCCTAGCTCCTGTCCAG				9qA5.3	Mus musculus ankyrin repeat and kinase domain containing 1 (Ankk1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	9930020N01Rik	9930020N01Rik
Mus musculus	RefSeq	ILMN_215101	ILMN_258386	1600016N20RIK	NM_028050.1	NM_028050.1		72000	113931153	NM_028050.1	1600016N20Rik	NP_082326.1	ILMN_1242629	007160192	S	1967	CTTCCGCTTCCTCTGCTACCCTCCCATCACTGAGGAATTGTGTCGGCGGT	7	-	148395976-148396025	7qF5	Mus musculus RIKEN cDNA 1600016N20 gene (1600016N20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217359	ILMN_217359	APBB3	NM_146085.1	NM_146085.1		225372	22122588	NM_146085.1	Apbb3	NP_666197.1	ILMN_1223271	005390364	S	1898	GTTTGTTGTTTATATGGATGACTGAGAGGCCCTGCACTGTAACTTAGGCC	18	-	36830927-36830976	18qB2	Mus musculus amyloid beta (A4) precursor protein-binding, family B, member 3 (Apbb3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rirl2; MGC38710; Fe65l2; TR2S	Rirl2; MGC38710; Fe65l2; TR2S
Mus musculus	RefSeq	ILMN_197494	ILMN_257453	LOC635297	XM_912044.2	XM_912044.2		635297	94369383	XM_912044.2	LOC635297	XP_917137.1	ILMN_1241977	005960161	S	1156	GGGTCCATTTGCAGGGTTAAAGTGATGCAGGAAGCAGGGCAGAGCAAAGG					PREDICTED: Mus musculus similar to hCG1647909, transcript variant 1 (LOC635297), mRNA.					
Mus musculus	RefSeq	ILMN_211243	ILMN_211243	KRT27	NM_010666.1	NM_010666.1		16675	7106336	NM_010666.1	Krt27	NP_034796.1	ILMN_2613938	006200671	S	1251	CGTTAAAACTGTCGTGGAAGAGTTAGACCCCCGTGGCAAGGTTCTCTCCT	11	-	99207118-99207167	11qD	Mus musculus keratin 27 (Krt27), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt1-c29; mIRSa3.1	Krt1-c29; mIRSa3.1
Mus musculus	RefSeq	ILMN_218002	ILMN_218002	4933439F18RIK	NM_025757.3	NM_025757.3		66771	34328468	NM_025757.3	4933439F18Rik	NP_080033.2	ILMN_2690371	002100431	S	3967	TGATAAGCTAATTTTTAAAAAGAAATGCCATTACGTATGTTACATTGTGG	11	+	60258504-60258553	11qB2	Mus musculus RIKEN cDNA 4933439F18 gene (4933439F18Rik), mRNA.				RP23-135F6.5	RP23-135F6.5
Mus musculus	RefSeq	ILMN_218002	ILMN_218002	4933439F18RIK	NM_025757.3	NM_025757.3		66771	34328468	NM_025757.3	4933439F18Rik	NP_080033.2	ILMN_1235140	003420243	S	1944	TGCTTAAATCACAGTGCTAAACACAGGAACTGTTTCCGGGCCGGCTGAGC	11	+	60256481-60256530	11qB2	Mus musculus RIKEN cDNA 4933439F18 gene (4933439F18Rik), mRNA.				RP23-135F6.5	RP23-135F6.5
Mus musculus	RefSeq	ILMN_218002	ILMN_218002	4933439F18RIK	NM_025757.3	NM_025757.3		66771	34328468	NM_025757.3	4933439F18Rik	NP_080033.2	ILMN_2701911	000270368	S	1946	GCTTAAATCACAGTGCTAAACACAGGAACTGTTTCCGGGCCGGCTGAGCA	11	+	60256483-60256532	11qB2	Mus musculus RIKEN cDNA 4933439F18 gene (4933439F18Rik), mRNA.				RP23-135F6.5	RP23-135F6.5
Mus musculus	RefSeq	ILMN_219128	ILMN_219128	MDFIC	NM_175088.3	NM_175088.3		16543	88014734	NM_175088.3	Mdfic	NP_780297.1	ILMN_2704637	002190056	S	3267	GGCCGTCAAGACTAATTGCTATAGTTTACACCTAGATATTCCATCTCTTT	6	+	15752052-15752101	6qA1	Mus musculus MyoD family inhibitor domain containing (Mdfic), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		Kdt1; Mdfid	Kdt1; Mdfid
Mus musculus	RefSeq	ILMN_214976	ILMN_214976	OLFR1517	NM_146585.1	NM_146585.1		258578	22129480	NM_146585.1	Olfr1517	NP_666796.1	ILMN_2926265	000510100	S	259	CGAGACATCAAAAGTATAACCTTCTATGCATGTGCCACTCAGGTTTGCTG					Mus musculus olfactory receptor 1517 (Olfr1517), mRNA.				MOR185-5	MOR185-5
Mus musculus	RefSeq	ILMN_216182	ILMN_216182	CLCN6	NM_011929.2	NM_011929.2		26372	118129991	NM_011929.2	Clcn6	NP_036059.1	ILMN_2668171	003140162	S	2546	TTACACGGCACAACCTGACAAATGAATTCCTGCAGGCCCGGCTGCGGCAG	4	-	147380907-147380956	4qE2	Mus musculus chloride channel 6 (Clcn6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]		
Mus musculus	MEEBO	ILMN_220736	ILMN_220736	RFC3	scl069263.1_19	XM_132528.3			38081653	XM_132528.3	Rfc3		ILMN_2726047	004560440	S	791	CCCAGAGACAGACTGGGAGGTGTATCTGAGGGAGACCGCAAATGCTATTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199746	ILMN_256142	EG386506	XM_903562.1	XM_903562.1		386506	82954782	XM_903562.1	EG386506	XP_908655.1	ILMN_1225532	000870397	S	340	GTGGGCACCGCTGTGATGGCCATGTTTCCCAACGTCTATGTGGCCATGGT	14	+	53395664-53395713	14qC2	PREDICTED: Mus musculus predicted gene, EG386506 (EG386506), mRNA.					
Mus musculus	Riken	ILMN_205848	ILMN_205848	A730029I18RIK	ri|A730029I18|PX00150J11|AK042841|2242					AK042841	A730029I18Rik		ILMN_1245659	005720019	S	1631	CTGCTTGACCACGATAAGCTACAGGCAGAAGGCAGATGGTAAGGAAGGGC										
Mus musculus	Riken	ILMN_207201	ILMN_207201	CHRNB2	ri|C030030P04|PX00665H20|AK081254|3483					AK081254	Chrnb2		ILMN_1235157	006450768	S	3240	TGCCGACCTCAGCACCTCAAAGGCTGAAGCACTGAACCCTGCCTCAAAAT						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; The process of communication from a neuron to a smooth muscle in the bladder that contributes to the expulsion of urine from the body [goid 60084] [evidence IGI]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 32226] [evidence IMP]; Any process that modulates the frequency, rate or extent of rapid eye movement (REM) sleep [goid 42320] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IGI]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IC ]; Any process that modulates the frequency, rate or extent of non-rapid eye movement sleep [goid 45188] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IMP]; Any process that modulates the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 32225] [evidence IMP]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process whose specific outcome is the progression of the vestibulocochlear nerve over time, from its formation to the mature structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea [goid 21562] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 45759] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51963] [evidence IMP]; Generation of a long process from a neuron whose cell body resides in the central nervous system. The process carries efferent (outgoing) action potentials from the cell body towards target cells [goid 21955] [evidence IMP]; The progression of the lateral geniculate nucleus over time from its initial formation until its mature state. The lateral geniculate nucleus is the primary processor of visual information received from the retina [goid 21771] [evidence IMP]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the regulated release of dopamine [goid 33603] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IGI]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IGI]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus [goid 1661] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IGI]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant [goid 42220] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IDA];  [goid 4889] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4889] [evidence IGI]		
Mus musculus	MEEBO	ILMN_194555	ILMN_194555	6330437I11RIK	scl11264.1.1_93						6330437I11Rik		ILMN_1228346	004250039	S	10	GTGTGTTGTTGGGTAGTAGTCACGAGTACTGATTTGGTCAGCAGGCCCTC										
Mus musculus	RefSeq	ILMN_215224	ILMN_215224	GZMC	NM_010371.1	NM_010371.1		14940	6754103	NM_010371.1	Gzmc	NP_034501.1	ILMN_1251209	002350196	S	769	CAAGAGTTTTGAGTTTTGTATCGTGGATAAAGAAAACGATGAAACACAGC	14	-	56850353-56850402	14qC3	Mus musculus granzyme C (Gzmc), mRNA.		The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	CCP2; AI323531; Ctla-5; Ctla5	CCP2; AI323531; Ctla-5; Ctla5
Mus musculus	RefSeq	ILMN_219304	ILMN_219304	SEC14L2	NM_144520.2	NM_144520.2		67815	118130014	NM_144520.2	Sec14l2	NP_653103.1	ILMN_2707017	001260075	S	2458	CAGCCTGGCCTTGGTTTACAATGCTGTTAGGTACATTAACCAATGAATAA	11	-	3997063-3997112	11qA1	Mus musculus SEC14-like 2 (S. cerevisiae) (Sec14l2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a protein from one side of a membrane to the other [goid 8320] [evidence ISS]	1300013M05Rik; TAP	1300013M05Rik; TAP
Mus musculus	RefSeq	ILMN_215932	ILMN_242490	CKT2	NM_173861.1	NM_173861.1		224291	33239394	NM_173861.1	Ckt2	NP_776286.1	ILMN_2665369	005290553	S	654	ACCAACACCCGAGAGCAGCACCGATGGGAAAGTAGATGTGAAAATAATCC	16	-	64478257-64478306	16qC1.3	Mus musculus CKT2 protein (Ckt2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_242490	ILMN_242490	CKT2	NM_173861.1	NM_173861.1		224291	33239394	NM_173861.1	Ckt2	NP_776286.1	ILMN_2962199	007650482	S	1072	CCACCCACTCCTTGGGTAGATCCCACTCCGGTTCCGGTTTCAGGATATGT	16	-	64477839-64477888	16qC1.3	Mus musculus CKT2 protein (Ckt2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_210454	ILMN_257968	OLFR974	NM_147107.1	NM_147107.1		259111	22128732	NM_147107.1	Olfr974	NP_667318.1	ILMN_1219329	005960538	S	561	AGCTTGCTCTAGAGACTATACCAAGGAGTTTTGGGTGATGATACTTGTTG	9	+	39750407-39750456	9qA5.1	Mus musculus olfactory receptor 974 (Olfr974), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-1	MOR171-1
Mus musculus	RefSeq	ILMN_221883	ILMN_221883	PLA2G16	NM_139269.2	NM_139269.2		225845	84781796	NM_139269.2	Pla2g16	NP_644675.2	ILMN_2741590	003360364	S	687	GGTTTGGAGTTTGATTTATAGATTCTATTGCTTTATAATTAGGTTTATTT	19	+	7660199-7660248	19qA	Mus musculus phospholipase A2, group XVI (Pla2g16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		Hrev107; C78643	Hrev107; C78643
Mus musculus	RefSeq	ILMN_215688	ILMN_215688	SERPINB11	NM_025867.1	NM_025867.1		66957	13385351	NM_025867.1	Serpinb11	NP_080143.1	ILMN_2834563	000650669	S	1339	GCCTCAGACTTATCCTGTGAGTTAGTGAGCCCAAGACTCTAGCAGCTGTG	1	+	109207662-109207711	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11 (Serpinb11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	AU015399; 2310046M08Rik	AU015399; 2310046M08Rik
Mus musculus	RefSeq	ILMN_214102	ILMN_214102	ZWILCH	NM_026507.3	NM_026507.3		68014	71143133	NM_026507.3	Zwilch	NP_080783.2	ILMN_1247268	002060274	S	1555	ACAAAATCCTCTTGATGAGCAACACATTTTTCAGTTGCCAGTCAGACCAG	9	-	63994656-63994705	9qC	Mus musculus Zwilch, kinetochore associated, homolog (Drosophila) (Zwilch), mRNA.	A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence ISO]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2310031L18Rik	2310031L18Rik
Mus musculus	RefSeq	ILMN_210582	ILMN_210582	RBM38	NM_019547.2	NM_019547.2		56190	134053932	NM_019547.2	Rbm38	NP_062420.2	ILMN_2708211	003710719	S	425	TCATCGATGGTCGCAAGGCCAATGTGAACCTGGCCTACCTGGGTGCCAAG	2	+	172848348-172848397	2qH3	Mus musculus RNA binding motif protein 38 (Rbm38), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rnpc1; Seb4l; Seb4	Rnpc1; Seb4l; Seb4
Mus musculus	RefSeq	ILMN_210582	ILMN_210582	RBM38	NM_019547.2	NM_019547.2		56190	134053932	NM_019547.2	Rbm38	NP_062420.2	ILMN_1240979	000830482	S	1516	TGCCAGTCTGACCTAGCTGCACAGAGAGAAGGTCCAGCCCACGTCTAGGA	2	+	172859974-172860023	2qH3	Mus musculus RNA binding motif protein 38 (Rbm38), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rnpc1; Seb4l; Seb4	Rnpc1; Seb4l; Seb4
Mus musculus	RefSeq	ILMN_215305	ILMN_215305	YIPF2	NM_138303.1	NM_138303.1		74766	19923858	NM_138303.1	Yipf2	NP_612176.1	ILMN_2691566	002680255	S	1044	CATGTGGTGCCAGCACCCCAAGCTACACCTCCATCTCCCAATGTCCTGCT	9	-	21394124-21394173	9qA3	Mus musculus Yip1 domain family, member 2 (Yipf2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1300010K09Rik	1300010K09Rik
Mus musculus	RefSeq	ILMN_209113	ILMN_215305	YIPF2	NM_138303.1	NM_138303.1		74766	19923858	NM_138303.1	Yipf2	NP_612176.1	ILMN_1239874	002510156	S	1674	CATGTTCTACTTAATCCTCTCAAGACAGCAACCCTGGGAAGGAGCCTCGC	9	-	21393494-21393543	9qA3	Mus musculus Yip1 domain family, member 2 (Yipf2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1300010K09Rik	1300010K09Rik
Mus musculus	RefSeq	ILMN_211132	ILMN_211132	RAD21	NM_009009.3	NM_009009.3		19357	142358025	NM_009009.3	Rad21	NP_033035.2	ILMN_2612856	007560162	S	3281	GTTAGTTTCTTGTTAAACATTTTGTTAGTCCAGTTTTTGTCGCTTATTGG	15	-	51794226-51794275	15qC	Mus musculus RAD21 homolog (S. pombe) (Rad21), mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	mKIAA0078; MGC150312; MGC150311; SCC1	mKIAA0078; MGC150312; MGC150311; SCC1
Mus musculus	RefSeq	ILMN_216153	ILMN_216153	CREBL1	NM_017406.2	NM_017406.2		12915	31980863	NM_017406.2	Crebl1	NP_059102.1	ILMN_2667889	002970224	S	2435	TTGGGAGTCAAGGTGGGACTAGGTCCCCAGGTGGGACAAGGGATGGTTGT	17	+	34788681-34788710:34788775-34788794	17qB1	Mus musculus cAMP responsive element binding protein-like 1 (Crebl1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	ATF6beta; Creb-rp; AA617266	ATF6beta; Creb-rp; AA617266
Mus musculus	RefSeq	ILMN_217422	ILMN_257688	OLFR790	NM_146933.1	NM_146933.1		258935	22129042	NM_146933.1	Olfr790	NP_667144.1	ILMN_2683036	007510719	S	601	CTCGAGCTCATGGCATTTTCATTAGCTGTGGTAACACTCATGGTCACCTT	10	+	128938542-128938591	10qD3	Mus musculus olfactory receptor 790 (Olfr790), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR112-1	MOR112-1
Mus musculus	RefSeq	ILMN_217538	ILMN_217538	HSD17B6	NM_013786.2	NM_013786.2		27400	23680951	NM_013786.2	Hsd17b6	NP_038814.1	ILMN_1234552	004060364	S	1354	CCATTCCAGGTCTATACAATTTATTACTATCTTAACCACTTTTTCCTGGG	10	-	127428047-127428096	10qD3	Mus musculus hydroxysteroid (17-beta) dehydrogenase 6 (Hsd17b6), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]; Catalysis of the reaction: testosterone + NAD+ = androst-4-ene-3,17-dione + NADH [goid 50327] [evidence IEA]	Hsd17b9; 17betaHSD9; Rdh8	Hsd17b9; 17betaHSD9; Rdh8
Mus musculus	RefSeq	ILMN_191411	ILMN_314709	4931429P17RIK	XM_001473688.1	XM_001473688.1		70971	149264208	XM_001473688.1	4931429P17Rik	XP_001473738.1	ILMN_1253017	003180100	S	733	CCCCTTCCTGGGTCTTGGTTTAAAGCAGAGAGAAAAATAACTTTCATATA	13	-	48065573-48065622	13qA5	PREDICTED: Mus musculus RIKEN cDNA 4931429P17 gene (4931429P17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188521	ILMN_314709	4931429P17RIK	XM_001473688.1	XM_001473688.1		70971	149264208	XM_001473688.1	4931429P17Rik	XP_001473738.1	ILMN_2453364	002490047	S	1658	TTACTTCTTCCTGATGGGCTAATGCTGTCGCAGTTTGCAGTTGGTATGCT	13	-	48056003-48056052	13qA5	PREDICTED: Mus musculus RIKEN cDNA 4931429P17 gene (4931429P17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_232292	ILMN_232292	APOA1BP	NM_144897.1	NM_144897.1		246703	21553308	NM_144897.1	Apoa1bp	NP_659146.1	ILMN_2997923	000870139	S	548	CTTCGGCTTCAGTTTCAAGGGTGACGTTCGGGAGCCATTCCACAGCATCC	3	-	88142966-88143015	3qF1	Mus musculus apolipoprotein A-I binding protein (Apoa1bp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	AI-BP; ESTM37; Apoa1ip; AA087124; AIBP	AI-BP; ESTM37; Apoa1ip; AA087124; AIBP
Mus musculus	RefSeq	ILMN_214726	ILMN_214726	MYH14	NM_028021.2	NM_028021.2		71960	118130423	NM_028021.2	Myh14	NP_082297.1	ILMN_1217519	004890309	S	6174	GTTAGAGAAACAAAATTGAACGTGGATGTCAAGAATGTCCTGTCTGCACC	7	-	51861341-51861390	7qB4	Mus musculus myosin, heavy polypeptide 14 (Myh14), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IDA]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of an actin filament to accelerate release of ADP and phosphate [goid 30898] [evidence IDA]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of an actin filament to accelerate release of ADP and phosphate [goid 30898] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	NHMCII; NMHC II-C; II-C; 2400004E04Rik	NHMCII; NMHC II-C; II-C; 2400004E04Rik
Mus musculus	RefSeq	ILMN_201192	ILMN_248669	LOC677473	XM_001003911.1	XM_001003911.1		677473	94411052	XM_001003911.1	LOC677473	XP_001003911.1	ILMN_1231127	006040544	S	237	CACAGTGGCGAACAGTGACAAAACAGTAAAGGAGTCTGACAGCACAGTGG					PREDICTED: Mus musculus hypothetical protein LOC677473 (LOC677473), mRNA.					
Mus musculus	RefSeq	ILMN_200075	ILMN_200075	LOC385707	XM_358918.1	XM_358918.1			38080236	XM_358918.1	LOC385707		ILMN_1224294	005900403	S	730	GTCTGCGATCAAAAGTCGTCTTGGGCAGGCATCAGCCATGTGCTTAACTG										
Mus musculus	RefSeq	ILMN_218690	ILMN_218690	NPHP1	NM_016902.3	NM_016902.3		53885	146134415	NM_016902.3	Nphp1	NP_058598.1	ILMN_1226240	007380162	S	1609	GCTCACTTACTGATATTTTACCGACAAATTCTTGGAGATGTGCTCCTGAG				2qF1	Mus musculus nephronophthisis 1 (juvenile) homolog (human) (Nphp1), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218690	ILMN_218690	NPHP1	NM_016902.3	NM_016902.3		53885	146134415	NM_016902.3	Nphp1	NP_058598.1	ILMN_1245093	007160328	S	1703	TGCTGGCCACCTTCCCTCTGCTCCTGGAGCAGCCCGACGTGATGGATGCT				2qF1	Mus musculus nephronophthisis 1 (juvenile) homolog (human) (Nphp1), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_186593	ILMN_186593	GRM2	scl35390.4_161				51765112	XM_135150	Grm2		ILMN_2474540	006330673	S	20	AGGACCCTTTTCTGATGACAGCCGCAGATGGCCTCGCCACAGGCATGTCT						A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence TAS]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence TAS]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence TAS]	A G-protein coupled receptor that is activated by trans-1-aminocyclopentane-1,3-dicarboxylic acid (t-ACPD) and inhibits adenylate cyclase activity [goid 1641] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5246] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186593	ILMN_186593	GRM2	scl35390.4_161				51765112	XM_135150	Grm2		ILMN_1230656	002470750	S	20	CTAGGAGACGGTTTTCCTCAGAGACCCAGCCTACGATATGGTGTGGGAAG						A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence TAS]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence TAS]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence TAS]	A G-protein coupled receptor that is activated by trans-1-aminocyclopentane-1,3-dicarboxylic acid (t-ACPD) and inhibits adenylate cyclase activity [goid 1641] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5246] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223163	ILMN_223163	NMUR1	NM_010341.1	NM_010341.1		14767	7110606	NM_010341.1	Nmur1	NP_034471.1	ILMN_1256834	006860411	S	873	TGCTGACCGTATCATGTGGAGCCTGGTGTATGGACACTCAACGGAAGGCC	1	-	88283195-88283244	1qD	Mus musculus neuromedin U receptor 1 (Nmur1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with neuromedin U to initiate a change in cell activity [goid 1607] [evidence IEA]; Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [evidence IPI]	NMU1R; NmU-R; FM-3; Gpr66	NMU1R; NmU-R; FM-3; Gpr66
Mus musculus	MEEBO	ILMN_221785	ILMN_221785	IQSEC3	scl28446.23_488	XM_145005.2			38085028	XM_145005.2	Iqsec3		ILMN_2740306	002470377	S	6257	CTGGGTTTTTGCTCCCCCTACTCCAGTGTCCAAAGAGTACCGGGATGTCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]		
Mus musculus	Riken	ILMN_205313	ILMN_205313	C730016G14RIK	ri|C730016G14|PX00086D12|AK050110|1911					AK050110	C730016G14Rik		ILMN_2571624	002680296	S	1561	CGGCACCTCCTGGAAGTTGGTTCTGGAGCTTTAGGCAGCCCTCTAAGCTT										
Mus musculus	MEEBO	ILMN_187173	ILMN_187173	IGKV9-128_AJ231245_IG_KAPPA_VARIABLE_9-128_15	IGKV9-128_AJ231245_Ig_kappa_variable_9-128_15						IGKV9-128_AJ231245_Ig_kappa_variable_9-128_15		ILMN_1232948	005570168	S	1	CCTGCTCAGTTTCTTGGGATCTTGTTGCTCTGGTGCCAGATGTGACATCT										
Mus musculus	RefSeq	ILMN_227487	ILMN_227487	TRIM6	NM_001013616.2	NM_001013616.2		94088	119637826	NM_001013616.2	Trim6	NP_001013637.1	ILMN_2940417	003460458	S	724	ACAGGGAGGAGCAGCGGGAACTGAAGAAACTGGAAGTGGAAGAGAGGAAG	7	+	111376724-111376773	7qE3	Mus musculus tripartite motif-containing 6 (Trim6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D7Ertd684e; C430046K18Rik	D7Ertd684e; C430046K18Rik
Mus musculus	RefSeq	ILMN_217434	ILMN_217434	GFER	NM_023040.3	NM_023040.3		11692	90403593	NM_023040.3	Gfer	NP_075527.2	ILMN_1219169	002650300	S	1708	GCATGTCAGCAGAGGGTCCTGGGAACAGCTTCCTTAGCGTTTGAGGCCAA	17	-	24830153-24830202	17qA3.3	Mus musculus growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration) (Gfer), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 4 R'C(R)SH + O2 = 2 R'C(R)S-S(R)CR' + 2 H2O [goid 16972] [evidence IEA]	Alr; ERV1	Alr; ERV1
Mus musculus	RefSeq	ILMN_192561	ILMN_244912	NUDT18	NM_153136.4	NM_153136.4		213484	146149253	NM_153136.4	Nudt18	NP_694776.2	ILMN_2489240	006650403	S	3658	TTCAGAATACTCATTCCCATACCATTTAGAAAACAGCCGATGTGGGAGTT				14qD2	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 18 (Nudt18), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC38179; BC036718	MGC38179; BC036718
Mus musculus	RefSeq	ILMN_192561	ILMN_244912	NUDT18	NM_153136.4	NM_153136.4		213484	146149253	NM_153136.4	Nudt18	NP_694776.2	ILMN_1216215	003990563	S	1311	GGAAAAGGCTGCATGTCAATCCTTCCAACCCCATAGGAATGTAGAGAGGG				14qD2	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 18 (Nudt18), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC38179; BC036718	MGC38179; BC036718
Mus musculus	RefSeq	ILMN_199388	ILMN_199388	OLFR1223	NM_146892.2	NM_146892.2		258894	112983591	NM_146892.2	Olfr1223	NP_667103.2	ILMN_1236922	007650603	S	1005	AGAGACTCTGTGTCATTCTGGTAGGGATAGCCTGGGCAGGAGGCTTCTTG	2	-	88984719-88984768	2qE1	Mus musculus olfactory receptor 1223 (Olfr1223), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR233-10	MOR233-10
Mus musculus	MEEBO	ILMN_223838	ILMN_223838	NTN4	scl38544.10.1_5				34328256	NM_021320	Ntn4		ILMN_2770211	000430180	S	2011	GTACCTGGTCGCTGGCCACGAGGACGTAAGAACAGGCAAATTAATTGTGA						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence ISS]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199500	ILMN_199500	LOC383586	XM_357136.1	XM_357136.1			38073565	XM_357136.1	LOC383586		ILMN_1237909	006940082	S	402	CTTTGCCAAGACCCAAGAATCTCCATGGGTAGCTGGACAGGAGAGGACTC										
Mus musculus	RefSeq	ILMN_222629	ILMN_196573	RAPGEF6	NM_175258.3	NM_175258.3		192786	82617637	NM_175258.3	Rapgef6	NP_780467.2	ILMN_2752533	003450343	S	1984	CCCTTGAAATTTTGAGAAATAATACTCATCTTGCACTTACTGTGAAGACC	11	+	54453301-54453350	11qB1.3	Mus musculus Rap guanine nucleotide exchange factor (GEF) 6 (Rapgef6), mRNA. XM_899825 XM_899831 XM_899833 XM_899839 XM_899844 XM_899852 XM_899857 XM_899864 XM_899870 XM_914359 XM_923133 XM_923142 XM_923148 XM_923153 XM_923157 XM_923164 XM_923169 XM_923176 XM_923184 XM_923193 XM_923207			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	mKIAA4052; KIAA4052; Pdzgef2; C030018K18Rik; AI844632; PDZ-GEF2; BB085664; RP23-287F5.1; Ragef2; RA-GEF-2; A530068K01	mKIAA4052; KIAA4052; Pdzgef2; C030018K18Rik; AI844632; PDZ-GEF2; BB085664; RP23-287F5.1; Ragef2; RA-GEF-2; A530068K01
Mus musculus	RefSeq	ILMN_192365	ILMN_196573	RAPGEF6	NM_175258.3	NM_175258.3		192786	82617637	NM_175258.3	Rapgef6	NP_780467.2	ILMN_2487426	000830593	S	6793	TCACTAATCTGGCCTATGAACTAACTGTGCTGGTTTCTGATTGTGAATCT	11	+	54511391-54511440	11qB1.3	Mus musculus Rap guanine nucleotide exchange factor (GEF) 6 (Rapgef6), mRNA. XM_899825 XM_899831 XM_899833 XM_899839 XM_899844 XM_899852 XM_899857 XM_899864 XM_899870 XM_914359 XM_923133 XM_923142 XM_923148 XM_923153 XM_923157 XM_923164 XM_923169 XM_923176 XM_923184 XM_923193 XM_923207			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	mKIAA4052; KIAA4052; Pdzgef2; C030018K18Rik; AI844632; PDZ-GEF2; BB085664; RP23-287F5.1; Ragef2; RA-GEF-2; A530068K01	mKIAA4052; KIAA4052; Pdzgef2; C030018K18Rik; AI844632; PDZ-GEF2; BB085664; RP23-287F5.1; Ragef2; RA-GEF-2; A530068K01
Mus musculus	RefSeq	ILMN_217665	ILMN_196573	RAPGEF6	NM_175258.3	NM_175258.3		192786	82617637	NM_175258.3	Rapgef6	NP_780467.2	ILMN_2686115	002710349	S	4912	TTGGATCCCAGCCTCAAAGGCATAGCCATCCCAAGCTAGCAGATGTGGCT	11	+	54508003-54508052	11qB1.3	Mus musculus Rap guanine nucleotide exchange factor (GEF) 6 (Rapgef6), mRNA. XM_899825 XM_899831 XM_899833 XM_899839 XM_899844 XM_899852 XM_899857 XM_899864 XM_899870 XM_914359 XM_923133 XM_923142 XM_923148 XM_923153 XM_923157 XM_923164 XM_923169 XM_923176 XM_923184 XM_923193 XM_923207			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	mKIAA4052; KIAA4052; Pdzgef2; C030018K18Rik; AI844632; PDZ-GEF2; BB085664; RP23-287F5.1; Ragef2; RA-GEF-2; A530068K01	mKIAA4052; KIAA4052; Pdzgef2; C030018K18Rik; AI844632; PDZ-GEF2; BB085664; RP23-287F5.1; Ragef2; RA-GEF-2; A530068K01
Mus musculus	RefSeq	ILMN_196573	ILMN_196573	RAPGEF6	NM_175258.3	NM_175258.3		192786	82617637	NM_175258.3	Rapgef6	NP_780467.2	ILMN_1254088	005050576	S	1422	CGGAGCGGAACCAGGAAAGGACACATTGTAATCAAGGCAACACCTGAGCG	11	+	54440204-54440239:54444694-54444707	11qB1.3	Mus musculus Rap guanine nucleotide exchange factor (GEF) 6 (Rapgef6), mRNA. XM_899825 XM_899831 XM_899833 XM_899839 XM_899844 XM_899852 XM_899857 XM_899864 XM_899870 XM_914359 XM_923133 XM_923142 XM_923148 XM_923153 XM_923157 XM_923164 XM_923169 XM_923176 XM_923184 XM_923193 XM_923207			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	mKIAA4052; KIAA4052; Pdzgef2; C030018K18Rik; AI844632; PDZ-GEF2; BB085664; RP23-287F5.1; Ragef2; RA-GEF-2; A530068K01	mKIAA4052; KIAA4052; Pdzgef2; C030018K18Rik; AI844632; PDZ-GEF2; BB085664; RP23-287F5.1; Ragef2; RA-GEF-2; A530068K01
Mus musculus	RefSeq	ILMN_196573	ILMN_196573	RAPGEF6	NM_175258.3	NM_175258.3		192786	82617637	NM_175258.3	Rapgef6	NP_780467.2	ILMN_2906948	002690753	S	7687	ACCCAGTGATTATTTGGGTGGAAACATTCTAGAAGACGCTGGGTGTGCCC	11	+	54512285-54512334	11qB1.3	Mus musculus Rap guanine nucleotide exchange factor (GEF) 6 (Rapgef6), mRNA. XM_899825 XM_899831 XM_899833 XM_899839 XM_899844 XM_899852 XM_899857 XM_899864 XM_899870 XM_914359 XM_923133 XM_923142 XM_923148 XM_923153 XM_923157 XM_923164 XM_923169 XM_923176 XM_923184 XM_923193 XM_923207			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	mKIAA4052; KIAA4052; Pdzgef2; C030018K18Rik; AI844632; PDZ-GEF2; BB085664; RP23-287F5.1; Ragef2; RA-GEF-2; A530068K01	mKIAA4052; KIAA4052; Pdzgef2; C030018K18Rik; AI844632; PDZ-GEF2; BB085664; RP23-287F5.1; Ragef2; RA-GEF-2; A530068K01
Mus musculus	RefSeq	ILMN_209250	ILMN_246382	ZFP407	XM_976217.1	XM_976217.1		240476	94405090	XM_976217.1	Zfp407	XP_981311.1	ILMN_1249245	007380605	S	2164	CAGGGCAAGCCATGGAACTGAAGCACGGCATTCAAGTAAGCCGCAGTTTC	18	-	84730292-84730341	18qE4	PREDICTED: Mus musculus zinc finger protein 407 (Zfp407), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_198271	ILMN_246382	ZFP407	XM_976217.1	XM_976217.1		240476	94405090	XM_976217.1	Zfp407	XP_981311.1	ILMN_1230839	000540110	S	5464	CCGAAACCACCTGAAAGAGCAGCACCCCGACATTGAGAACCCTGACCTCG	18	-	84485212-84485261	18qE4	PREDICTED: Mus musculus zinc finger protein 407 (Zfp407), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_211534	ILMN_211534	TBL3	NM_145396.4	NM_145396.4		213773	141802154	NM_145396.4	Tbl3	NP_663371.2	ILMN_2616786	004210056	S	2329	TGCTGGCCTACGACGGGGTGCGGGGGTCACTGGAGGCCTTGCTGCCCTAC	17	-	24837824-24837873	17qA3.3	Mus musculus transducin (beta)-like 3 (Tbl3), mRNA.				9430070M15Rik	9430070M15Rik
Mus musculus	RefSeq	ILMN_201318	ILMN_235175	BEST3	NM_001007583.1	NM_001007583.1		382427	56090232	NM_001007583.1	Best3	NP_001007584.1	ILMN_2541872	007040537	S	2461	TTAACAACGAGCACACTGGAGAATCCCCGAAGGGAACACCACAGCGCCCC	10	+	116461838-116461887	10qD2	Mus musculus bestrophin 3 (Best3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of inorganic anions into, out of, within or between cells. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage [goid 15698] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 43271] [evidence IDA]	Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IDA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Vmd2l3; mBest4	Vmd2l3; mBest4
Mus musculus	RefSeq	ILMN_235175	ILMN_235175	BEST3	NM_001007583.1	NM_001007583.1		382427	56090232	NM_001007583.1	Best3	NP_001007584.1	ILMN_2918742	003780400	S	2387	GGCTGGCTCTGCCCTCGCCCCCGACATCCTGTACTTAATGGAAAGTTTGG	10	+	116461764-116461813	10qD2	Mus musculus bestrophin 3 (Best3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of inorganic anions into, out of, within or between cells. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage [goid 15698] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 43271] [evidence IDA]	Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IDA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Vmd2l3; mBest4	Vmd2l3; mBest4
Mus musculus	RefSeq	ILMN_184819	ILMN_232529	BRD7	NM_012047.1	NM_012047.1		26992	6755233	NM_012047.1	Brd7	NP_036177.1	ILMN_1257340	000010156	S	2035	CACGGAGTGCGAAAAGCAATGGGGATTTCTGTTCCTTCCCCCATCGTGGG	8	-	90856797-90856846	8qC3	Mus musculus bromodomain containing 7 (Brd7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence ISO]	Ptpn13ip; CELTIX1; BP75	Ptpn13ip; CELTIX1; BP75
Mus musculus	RefSeq	ILMN_184819	ILMN_232529	BRD7	NM_012047.1	NM_012047.1		26992	6755233	NM_012047.1	Brd7	NP_036177.1	ILMN_1237950	002570356	S	1557	GGCCACATGCCAAGATTACCCGTATGTTATGGCAGATAGTTTACTGGATG	8	-	90863346-90863395	8qC3	Mus musculus bromodomain containing 7 (Brd7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence ISO]	Ptpn13ip; CELTIX1; BP75	Ptpn13ip; CELTIX1; BP75
Mus musculus	RefSeq	ILMN_193983	ILMN_237148	SLAIN2	NM_153567.1	NM_153567.1		75991	23956355	NM_153567.1	Slain2	NP_705795.1	ILMN_2686270	005550537	S	3878	CTAGACTATGTATGTTCAGATTGACGTAACTCACTGTACAGGTGTCCGGT	5	+	73369895-73369944	5qC3.2	Mus musculus SLAIN motif family, member 2 (Slain2), mRNA.				8030444K12Rik; 5033405K12Rik; MGC47019; mKIAA1458; AI596370	8030444K12Rik; 5033405K12Rik; MGC47019; mKIAA1458; AI596370
Mus musculus	RefSeq	ILMN_246869	ILMN_246869	VWDE	NM_001013757.2	NM_001013757.2		232585	147903646	NM_001013757.2	Vwde	NP_001013779.2	ILMN_3161621	002350497	S	3720	GCAGATCTCACCGATGCAGGTAAGATGTCCTCACTAAGGCCACAACCGGA				6qA1	Mus musculus von Willebrand factor D and EGF domains (Vwde), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_184422	ILMN_184422	ZFP78	NM_177888.2	NM_177888.2		330463	31342741	NM_177888.2	Zfp78	NP_808556.1	ILMN_2418494	005360682	S	13	CTCTCAGGCAGTTGGTGTTTGAGGATGTGGCAGTGGAGAACACTACAAGT	7	+	5967540-5967589	7qA1	Mus musculus zinc finger protein 78 (Zfp78), transcript variant 2, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	A330079D15; KRAB12; Zfp77; MGC102644	A330079D15; KRAB12; Zfp77; MGC102644
Mus musculus	MEEBO	ILMN_210056	ILMN_210056	AW111922	scl060440.1_38	NM_021792.1			11140830	NM_021792.1	AW111922		ILMN_2612776	004390630	S	2718	TAGGGGACATGATGAAATTTCTCTGCTTTATAATGATTAGTGTTTTGAAT										
Mus musculus	RefSeq	ILMN_220087	ILMN_220087	GPR103	NM_198192.2	NM_198192.2		229214	67514557	NM_198192.2	Gpr103	NP_937835.1	ILMN_2717447	002690403	S	1066	TTGTCTGCGGTTTGTTATTGCATAGTAAGAGAAACCTTCTCCCCAGGACA	3	-	36079033-36079082	3qB	Mus musculus G protein-coupled receptor 103 (Gpr103), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]	SP9155; AQ27	SP9155; AQ27
Mus musculus	RefSeq	ILMN_196685	ILMN_196685	BC031601	XM_135176.3	XM_135176.3			38090180	XM_135176.3	BC031601		ILMN_2703648	006620398	S	2372	GACTGAATAGTTTAATATGAATAGCAAAGCTCGTTTGCTTACCCCTTCGG										
Mus musculus	Riken	ILMN_202473	ILMN_202473	5830455K21RIK	ri|5830455K21|PX00040E01|AK018015|986					AK018015	5830455K21Rik		ILMN_2549885	001780280	S	657	AGCCCACCCCTAGTGACAGAGTTCTCCAACAAGGCCACATCTACTCCAAC										
Mus musculus	RefSeq	ILMN_191603	ILMN_232265	SLC25A10	NM_013770.1	NM_013770.1		27376	7305500	NM_013770.1	Slc25a10	NP_038798.1	ILMN_2730797	004830692	S	1637	TCAGCGGCTACTGCCGTCACCAGGAACTGTCTGTGTCCCTCACACGCCTG	11	+	120360147-120360196	11qE2	Mus musculus solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10 (Slc25a10), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence ISA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 15291] [evidence IDA]	Dic	Dic
Mus musculus	Riken	ILMN_203348	ILMN_203348	PDE10A	ri|B330017C21|PX00070J13|AK046535|3676					AK046535	Pde10a		ILMN_1228623	006180482	S	3278	CCCAGTGTCCCCCAGGAACAGCACCAGCCCCCTTTCAGGGTAAAGTTCTA								Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IDA]		
Mus musculus	MEEBO	ILMN_184784	ILMN_184784	5830454D03RIK	scl34984.1_220						5830454D03Rik		ILMN_1229240	002510537	S	11	CCTGCTTACAAAAGTTTGCCCGTCTTGAGTCTGGTGAGTTTCCCCACTGT										
Mus musculus	RefSeq	ILMN_202948	ILMN_237931	DGKB	NM_178681.4	NM_178681.4		217480	142365036	NM_178681.4	Dgkb	NP_848796.2	ILMN_1228648	000060114	S	555	GCGTGCTTGCAAAGTATAATCCTGAAGGGACCATAGATTTTGAAGGCTTC	12	+	38810802-38810830:38826951-38826971	12qA3	Mus musculus diacylglycerol kinase, beta (Dgkb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IDA]	90kda; mKIAA0718; DGK-beta; C630029D13Rik; DAGK2; 6430574F24; DGK	90kda; mKIAA0718; DGK-beta; C630029D13Rik; DAGK2; 6430574F24; DGK
Mus musculus	RefSeq	ILMN_187326	ILMN_237931	DGKB	NM_178681.4	NM_178681.4		217480	142365036	NM_178681.4	Dgkb	NP_848796.2	ILMN_2443156	000050520	S	3230	CCTTTGCTTATTAGAGTCACTGCATCCCTGGTGTTCGACCCGTGGCTTAA	12	+	39357683-39357732	12qA3	Mus musculus diacylglycerol kinase, beta (Dgkb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IDA]	90kda; mKIAA0718; DGK-beta; C630029D13Rik; DAGK2; 6430574F24; DGK	90kda; mKIAA0718; DGK-beta; C630029D13Rik; DAGK2; 6430574F24; DGK
Mus musculus	RefSeq	ILMN_198423	ILMN_253164	LOC669795	XM_977180.1	XM_977180.1		669795	94379003	XM_977180.1	LOC669795	XP_982274.1	ILMN_2531634	004760332	S	556	CCAGCAGGTGAAGCCTTAGAGCACAGAGAATCCTGACAGAGGGCCCCAGA					PREDICTED: Mus musculus hypothetical protein LOC669795 (LOC669795), mRNA.					
Mus musculus	RefSeq	ILMN_230323	ILMN_230323	TCSTV1	NM_018756.2	NM_018756.2		54382	24476000	NM_018756.2	Tcstv1	NP_061226.1	ILMN_2946986	004120332	S	557	TGACCTGTGACGGTGGAGACTGCCCTGTCCGGGATCCTGTTTCTGACAGT	Un|NT_053651.2	-	37610-37659		Mus musculus 2-cell-stage, variable group, member 1 (Tcstv1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lo1	Lo1
Mus musculus	RefSeq	ILMN_214755	ILMN_214755	9630031F12RIK	NM_021416.2	NM_021416.2		58227	46849732	NM_021416.2	9630031F12Rik	NP_067391.2	ILMN_2651582	002600044	S	3561	GTGCCTCCTGTTACACATCTCAGCTTCGATGCATTATGCTAAGTCTTTGC	5	-	45921263-45921312	5qB3	Mus musculus RIKEN cDNA 9630031F12 gene (9630031F12Rik), mRNA.				KIAA1276; AB041544	KIAA1276; AB041544
Mus musculus	RefSeq	ILMN_244158	ILMN_244158	ACSL6	NM_001033597.1	NM_001033597.1		216739	75992912	NM_001033597.1	Acsl6	NP_001028769.1	ILMN_3125814	000630286	A	2244	CGTGTGAAGCTCCAGGAGGGCCCGTCTCAGTCCGATGAACTTTGCAGCAA	11	+	54174693-54174699:54174700-54174742	11qB1.3	Mus musculus acyl-CoA synthetase long-chain family member 6 (Acsl6), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC36650; AW050338; LACS; mKIAA0837; A330035H04Rik; Facl6; Lacsl	MGC36650; AW050338; LACS; mKIAA0837; A330035H04Rik; Facl6; Lacsl
Mus musculus	MEEBO	ILMN_222111	ILMN_222111	2310067E19RIK	scl0076455.1_230	NM_172427.1			27369564	NM_172427.1	2310067E19Rik		ILMN_2744766	005700075	S	3167	AAAGTTTAGAGAGATTTTTAGGAAGAGTTACATGATCTTTAGAGGAGCCC										
Mus musculus	RefSeq	ILMN_190161	ILMN_258784	GNAS	NM_022000.2	NM_022000.2		14683	117959902	NM_022000.2	Gnas	NP_068840.2	ILMN_2632206	002320189	S	1070	GGAGAGTCTGGCAAAAGCACCATTGTGAAGCAGATGAGGATCCTGCATGT	2	+	174159719-174159768	2qH4	Mus musculus GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus (Gnas), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS];  [goid 6112] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1
Mus musculus	RefSeq	ILMN_208623	ILMN_258784	GNAS	NM_022000.2	NM_022000.2		14683	117959902	NM_022000.2	Gnas	NP_068840.2	ILMN_2588147	007050682	S	1354	TGGGAAGTCAAAGTTCGGCACGTTCATCACGCTCAGAATGTAGTCCACTC	2	+	174167428-174167430:174168701-174168747	2qH4	Mus musculus GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus (Gnas), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS];  [goid 6112] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1
Mus musculus	RefSeq	ILMN_213560	ILMN_258784	GNAS	NM_022000.2	NM_022000.2		14683	117959902	NM_022000.2	Gnas	NP_068840.2	ILMN_2638324	001090132	S	251	ACCTAAGAGAATGGATCGCAGGTCCCGGGCTCAGCAGTGGCGCCGAGCTC	2	+	174110166-174110174:174110175-174110215	2qH4	Mus musculus GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus (Gnas), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS];  [goid 6112] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1
Mus musculus	RefSeq	ILMN_201536	ILMN_201536	SNN	NM_009223.2	NM_009223.2		20621	50233915	NM_009223.2	Snn	NP_033249.1	ILMN_2542803	004860373	S	124	GCCAGGCACACCAAGAGCTTTCCACCAAAGAAGCCCCTCCAAGCACTGAC	16	+	11072361-11072410	16qA1	Mus musculus stannin (Snn), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107297; AW547286; AI848521; 2810407J07Rik	MGC107297; AW547286; AI848521; 2810407J07Rik
Mus musculus	RefSeq	ILMN_201536	ILMN_201536	SNN	NM_009223.2	NM_009223.2		20621	50233915	NM_009223.2	Snn	NP_033249.1	ILMN_2790373	001030577	S	2554	GGGTCAGGGTCAGGTCTTCTGATGGTTACGAAGCTAGCCTTTCATCCTGG	16	+	11074791-11074840	16qA1	Mus musculus stannin (Snn), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107297; AW547286; AI848521; 2810407J07Rik	MGC107297; AW547286; AI848521; 2810407J07Rik
Mus musculus	RefSeq	ILMN_201536	ILMN_201536	SNN	NM_009223.2	NM_009223.2		20621	50233915	NM_009223.2	Snn	NP_033249.1	ILMN_2724167	002970066	S	678	GGCCCCTTAGCGCTTTCCTTACTTGAATGTTTTAGCTGAGCCTGTTTTTG	16	+	11072915-11072964	16qA1	Mus musculus stannin (Snn), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107297; AW547286; AI848521; 2810407J07Rik	MGC107297; AW547286; AI848521; 2810407J07Rik
Mus musculus	MEEBO	ILMN_192843	ILMN_192843	TCRG-V4	scl021638.5_137						Tcrg-V4		ILMN_2491839	000630376	S	3	TGTGTGCAATTTCTGCAACTTCTCTCTAACTCACATCACCTCATTCCTGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217409	ILMN_217409	TMCO4	NM_029857.2	NM_029857.2		77056	31981364	NM_029857.2	Tmco4	NP_084133.1	ILMN_1218034	006580491	S	2659	CTGGACTGACCCAGCAGGCATCTGGACTACCTCTCCAGACTTCTGTATGC	4	+	138614423-138614431:138614432-138614472	4qD3	Mus musculus transmembrane and coiled-coil domains 4 (Tmco4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4632413C14Rik; AI430825	4632413C14Rik; AI430825
Mus musculus	RefSeq	ILMN_217409	ILMN_217409	TMCO4	NM_029857.2	NM_029857.2		77056	31981364	NM_029857.2	Tmco4	NP_084133.1	ILMN_2891104	002490465	S	3100	CCAGTACATTTATGCAGGCTGGGTGCACTGGACAACGGCAGGCGTAACAG	4	+	138614864-138614913	4qD3	Mus musculus transmembrane and coiled-coil domains 4 (Tmco4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4632413C14Rik; AI430825	4632413C14Rik; AI430825
Mus musculus	RefSeq	ILMN_201221	ILMN_201221	LOC384938	XM_357948.1	XM_357948.1			38089929	XM_357948.1	LOC384938		ILMN_1240784	005340164	S	348	TGAGGATGCAGGAGCAGAAATTCCAAGACTGAACTATGACCAGCTCCAGC										
Mus musculus	MEEBO	ILMN_215390	ILMN_215390	CXCL12	scl0001241.1_2518	NM_013655.2			12025674	NM_013655.2	Cxcl12		ILMN_2658908	007550112	S	2871	TCGACGGGCTAGCAGTGTCTAAGCAGCGATGGGTTCAGTGTTGTGTGTGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IDA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199012	ILMN_237880	TAAR9	NM_001010831.1	NM_001010831.1		503558	58082062	NM_001010831.1	Taar9	NP_001010831.1	ILMN_1224966	005050441	S	678	TCAGGCTAGGAAGATAGAGGGTACAGCCAACCAAGCTCAGGCCTCCTCTG	10	-	23828613-23828662	10qA4	Mus musculus trace amine-associated receptor 9 (Taar9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm231; Tar3; Trar3; Ta3	Gm231; Tar3; Trar3; Ta3
Mus musculus	RefSeq	ILMN_237880	ILMN_237880	TAAR9	NM_001010831.1	NM_001010831.1		503558	58082062	NM_001010831.1	Taar9	NP_001010831.1	ILMN_2884207	005700167	S	680	AGGCTAGGAAGATAGAGGGTACAGCCAACCAAGCTCAGGCCTCCTCTGAG	10	-	23828611-23828660	10qA4	Mus musculus trace amine-associated receptor 9 (Taar9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm231; Tar3; Trar3; Ta3	Gm231; Tar3; Trar3; Ta3
Mus musculus	RefSeq	ILMN_191119	ILMN_313987	LOC100045457	XR_031710.1	XR_031710.1		100045457	149246518	XR_031710.1	LOC100045457		ILMN_1227030	004780592	S	3665	GGTGATGCTCTTTGTAGTACACTCAGAGTCCTGCTGCTTTAGAAACTTGG					PREDICTED: Mus musculus similar to isoleucine-tRNA synthetase 2, mitochondrial (LOC100045457), misc RNA.					
Mus musculus	RefSeq	ILMN_223084	ILMN_318048	GTPBP5	NM_001083328.1	NM_001083328.1		52856	134032034	NM_001083328.1	Gtpbp5	NP_001076797.1	ILMN_2759167	001990181	S	1444	CCGTGTGCCCCAGGGCCAGCGTGGAACGGGGGTGGGCCATCAATCACAGG	2	+	179820491-179820540	2qH4	Mus musculus GTP binding protein 5 (Gtpbp5), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810011P19Rik; D2Bwg0647e; 2900056P18Rik	1810011P19Rik; D2Bwg0647e; 2900056P18Rik
Mus musculus	RefSeq	ILMN_191705	ILMN_240453	AKR1B3	NM_009658.2	NM_009658.2		11677	31981908	NM_009658.2	Akr1b3	NP_033788.2	ILMN_2591917	001340398	S	1233	CCCCCCTGGAGGACTTTAACACAAGTACCCTTTCCAACCAAAGAGAAGCA	6	-	34254031-34254080	6qB1	Mus musculus aldo-keto reductase family 1, member B3 (aldose reductase) (Akr1b3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+ [goid 4032] [evidence IDA]	Aldor1; Aldr1; Ahr-1; Akr1b1; ALR2; AR; Ahr1	Aldor1; Aldr1; Ahr-1; Akr1b1; ALR2; AR; Ahr1
Mus musculus	RefSeq	ILMN_210269	ILMN_210269	PRPS1	NM_021463.3	NM_021463.3		19139	142368021	NM_021463.3	Prps1	NP_067438.1	ILMN_1230518	005340224	S	1890	CCTTGGATCCGTTTGGCCTCTCAATTGAACTTACTGTATTGTGTAGAAGA	X	+	137010604-137010653	XqF1	Mus musculus phosphoribosyl pyrophosphate synthetase 1 (Prps1), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9156] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells [goid 44249] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [evidence IEA]	C76571; Prps-1; 2310010D17Rik; C76678	C76571; Prps-1; 2310010D17Rik; C76678
Mus musculus	RefSeq	ILMN_199846	ILMN_199846	LOC383080	XM_356848.1	XM_356848.1			38077951	XM_356848.1	LOC383080		ILMN_1252084	003520682	S	238	CTGCATCCCTGGAGACCTGCTGGCACCCAAAATAACAAGGTGAGATCCTC										
Mus musculus	Riken	ILMN_203078	ILMN_203078	CUL1	ri|A430053B07|PX00136F07|AK040053|530					AK040053	Cul1		ILMN_1222157	004590546	S	390	CTCTACACGTATCCTCTTGCTTGAGCTGTAGTTGGTGTGTCTAGGGTTGG						A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1) [goid 19005] [evidence IDA]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IC ]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199941	ILMN_199941	LOC381587	XM_358625.1	XM_358625.1			38079093	XM_358625.1	LOC381587		ILMN_1217856	001190382	S	768	TAGAGCCGTATCATGCCTCCTCTGCCACTGGAACACAGACCCAGGCAGCA										
Mus musculus	RefSeq	ILMN_216318	ILMN_216318	EML3	NM_144872.1	NM_144872.1		225898	21450110	NM_144872.1	Eml3	NP_659121.1	ILMN_2830983	000360768	S	2707	TACCCATGTGCTCGAGCCAAGGCGCCAAGTCGTATGTACTCAGGCCATGG	19	+	9015503-9015523:9015620-9015648	19qA	Mus musculus echinoderm microtubule associated protein like 3 (Eml3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC38588; BC022146; MGC37888	MGC38588; BC022146; MGC37888
Mus musculus	RefSeq	ILMN_216318	ILMN_216318	EML3	NM_144872.1	NM_144872.1		225898	21450110	NM_144872.1	Eml3	NP_659121.1	ILMN_2830979	006220379	S	3067	GGAGGGGCTAACCACCCCACTGCACACAAAATAACAACAGACTTGCTGGC	19	+	9015959-9016008	19qA	Mus musculus echinoderm microtubule associated protein like 3 (Eml3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC38588; BC022146; MGC37888	MGC38588; BC022146; MGC37888
Mus musculus	RefSeq	ILMN_190093	ILMN_242464	SP3	NM_001018042.3	NM_001018042.3		20687	148536865	NM_001018042.3	Sp3	NP_001018052.1	ILMN_2701516	006200215	S	3189	ATTTGCCAAAATAATGTCTTGTTAATATTCTTTCAATAATGAAGTTGGGC				2qC3	Mus musculus trans-acting transcription factor 3 (Sp3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; The process by which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils [goid 30851] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IMP]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The process by which the anatomical structures of the eye are generated and organized during embryonic development. Morphogenesis pertains to the creation of form [goid 48596] [evidence IGI]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IGI]; A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process by which a myeloid precursor cell acquires specializes features of a megakaryocyte [goid 30219] [evidence IGI]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IGI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]	D130027J01Rik; MGC105187	D130027J01Rik; MGC105187
Mus musculus	Riken	ILMN_206557	ILMN_206557	E030050E10RIK	ri|E030050E10|PX00207F11|AK087361|1348					AK087361	E030050E10Rik		ILMN_1240990	004280612	S	1096	GTGGAACATGCCGGACAGCAGCAGACAGTAACTCCTCTGATTGCATGCTG										
Mus musculus	RefSeq	ILMN_221176	ILMN_231178	PHACTR3	NM_001007154.2	NM_001007154.2		74189	141803159	NM_001007154.2	Phactr3	NP_001007155.1	ILMN_1256544	000510121	S	2390	GTAGATTCTGTCAAATATATACAGGCTTGTGCCTTGACAAACTAGTTACC	2	+	178070892-178070941	2qH4	Mus musculus phosphatase and actin regulator 3 (Phactr3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	4930415A02Rik; SCAPIN1; H17739; 1500003N10Rik; mKIAA4224; KIAA4224; scapinin	4930415A02Rik; SCAPIN1; H17739; 1500003N10Rik; mKIAA4224; KIAA4224; scapinin
Mus musculus	RefSeq	ILMN_187473	ILMN_254721	SYT4	NM_009308.3	NM_009308.3		20983	60218903	NM_009308.3	Syt4	NP_033334.2	ILMN_1232559	000520739	S	3436	AAAAATTGTAAATAGTTTTTAGTTTTACGACTTAAAGTGTTTTGATGGGG	18	-	31597877-31597926	18qB1	Mus musculus synaptotagmin IV (Syt4), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis [goid 17158] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	SytIV	SytIV
Mus musculus	RefSeq	ILMN_187473	ILMN_254721	SYT4	NM_009308.3	NM_009308.3		20983	60218903	NM_009308.3	Syt4	NP_033334.2	ILMN_2690014	003370541	S	2260	ACCATGGTCTTGAATTATTCACTGCCTGTCAGAAGCCTCAGTGTGGCCTA	18	-	31599053-31599102	18qB1	Mus musculus synaptotagmin IV (Syt4), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis [goid 17158] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	SytIV	SytIV
Mus musculus	RefSeq	ILMN_197964	ILMN_225861	LOC224010	XR_003162.1	XR_003162.1		224010	94401049	XR_003162.1	LOC224010		ILMN_2529992	000450754	S	391	CAAACCAAGACAGAGGCCACAGCTCCAACTAAGGTCTAGGCTCTAGCTCC				16qA2	PREDICTED: Mus musculus similar to 60S ribosomal protein L29 (P23) (LOC224010), mRNA.					
Mus musculus	RefSeq	ILMN_212250	ILMN_212250	PIK3R3	NM_181585.5	NM_181585.5		18710	118130676	NM_181585.5	Pik3r3	NP_853616.1	ILMN_1226157	001850446	S	4588	GGTCCTTTGCTGCCAACTGCTCATTCTTGACTTAGCTCTAGCCATTTGTG	4	+	115975245-115975294	4qD1	Mus musculus phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55) (Pik3r3), mRNA.	A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IPI]	The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulates the activity of the enzyme 1-phosphatidylinositol-3-kinase activity [goid 46935] [evidence IDA]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]	p55pik; AA414954	p55pik; AA414954
Mus musculus	RefSeq	ILMN_212250	ILMN_212250	PIK3R3	NM_181585.5	NM_181585.5		18710	118130676	NM_181585.5	Pik3r3	NP_853616.1	ILMN_1248521	001400184	S	4951	GACTTGGAATGGTTGGCAGACTTGCTCCAGATGCAATAAAGACATTGCAG	4	+	115975608-115975657	4qD1	Mus musculus phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 3 (p55) (Pik3r3), mRNA.	A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IPI]	The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulates the activity of the enzyme 1-phosphatidylinositol-3-kinase activity [goid 46935] [evidence IDA]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]	p55pik; AA414954	p55pik; AA414954
Mus musculus	RefSeq	ILMN_218086	ILMN_218086	MCM6	NM_008567.1	NM_008567.1		17219	6678831	NM_008567.1	Mcm6	NP_032593.1	ILMN_1217331	003990243	S	2788	TCTTCATGTATAGGAAAAGCCTGCTGCATTTGTCATACATGTGTCTGTGG	1	-	130228231-130228280	1qE4	Mus musculus minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) (Mcm6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IPI]	ASP-l1; Mcmd6; D1Wsu22e	ASP-l1; Mcmd6; D1Wsu22e
Mus musculus	RefSeq	ILMN_218086	ILMN_218086	MCM6	NM_008567.1	NM_008567.1		17219	6678831	NM_008567.1	Mcm6	NP_032593.1	ILMN_1236125	005700224	S	391	CCGAAAGGAGATCCCTTTTGCTAAGGATTTTTATGTTGCATTCCAAGACC	1	-	130250052-130250101	1qE4	Mus musculus minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) (Mcm6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IPI]	ASP-l1; Mcmd6; D1Wsu22e	ASP-l1; Mcmd6; D1Wsu22e
Mus musculus	RefSeq	ILMN_218086	ILMN_218086	MCM6	NM_008567.1	NM_008567.1		17219	6678831	NM_008567.1	Mcm6	NP_032593.1	ILMN_1233857	000270379	S	2162	GCCCCTGTGAATAGGTTCAACGGCTCCAGTGAAGATGCCAGCCAGGAGAC	1	-	130231428-130231477	1qE4	Mus musculus minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) (Mcm6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IPI]	ASP-l1; Mcmd6; D1Wsu22e	ASP-l1; Mcmd6; D1Wsu22e
Mus musculus	RefSeq	ILMN_218086	ILMN_218086	MCM6	NM_008567.1	NM_008567.1		17219	6678831	NM_008567.1	Mcm6	NP_032593.1	ILMN_2803399	003290437	S	2416	GGTTGTTCATCGTCTCACACACTACGATCACGTTCTGATTGAGCTCACCC	1	-	130228603-130228628:130230094-130230117	1qE4	Mus musculus minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) (Mcm6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IPI]	ASP-l1; Mcmd6; D1Wsu22e	ASP-l1; Mcmd6; D1Wsu22e
Mus musculus	Riken	ILMN_206809	ILMN_206809	D630022F07RIK	ri|D630022F07|PX00197E17|AK085401|928					AK085401	D630022F07Rik		ILMN_2582848	004200022	S	560	CCACAGAGGGTCCCAAAGAAACAGCCCTGGTGCGTAGACTGTGTGAAGTG										
Mus musculus	RefSeq	ILMN_218678	ILMN_218678	AKP3	NM_007432.2	NM_007432.2		11648	110347478	NM_007432.2	Akp3	NP_031458.2	ILMN_2698889	002360706	S	1233	GTATGGCAACGGCCCAGGCTATGTCGGTACAGGGGAAAGACCCAACGTCA	1	+	89023954-89024003	1qD	Mus musculus alkaline phosphatase 3, intestine, not Mn requiring (Akp3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; The process by which the anatomical structures of the tail are generated and organized. Morphogenesis pertains to the creation of form. The tail is the hindmost part of some animals [goid 35121] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum [goid 4035] [evidence IEA]	IAP; Akp-3	IAP; Akp-3
Mus musculus	RefSeq	ILMN_248165	ILMN_248165	RDH8	NM_001030290.1	NM_001030290.1		235033	71892411	NM_001030290.1	Rdh8	NP_001025461.1	ILMN_2860731	002260725	S	1047	GAATTTGGGATGGAGTGGGAGGCAGAGGGAGTTGAGGAGGTTCCAGCCAT	9	+	20630204-20630253	9qA3	Mus musculus retinol dehydrogenase 8 (Rdh8), mRNA.		The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IDA]	Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IDA]	prRDH; Gm182	prRDH; Gm182
Mus musculus	RefSeq	ILMN_248073	ILMN_248073	BC023105	NM_001040201.1	NM_001040201.1		207269	93352546	NM_001040201.1	BC023105	NP_001035291.1	ILMN_2832239	007560246	S	1212	AATCCCTAATGTTCATGGCTAAGGATGCCCAAGTGCCTTTTGAACTGCTG					Mus musculus cDNA sequence BC023105 (BC023105), mRNA.				MGC28198	MGC28198
Mus musculus	RefSeq	ILMN_244841	ILMN_244841	PABPNL1	NM_001007462.1	NM_001007462.1		382035	55925590	NM_001007462.1	Pabpnl1	NP_001007463.1	ILMN_2947642	005130446	S	788	CCTGCACGGTAGCCTCCATCGAAAAGCTCGGTTAAGAGCCCATGGACGGA	8	-	125144186-125144235	8qE1	Mus musculus poly(A)binding protein nuclear-like 1 (Pabpnl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence ISA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Gm1108; ePABP2	Gm1108; ePABP2
Mus musculus	RefSeq	ILMN_197605	ILMN_197605	LOC333859	XM_289971.1	XM_289971.1			28481242	XM_289971.1	LOC333859		ILMN_1252406	005130463	S	1	ATGTTCCTAGTGACCATTCTGCTGCTCAGCGCGTTCTTCTCACTGAGAGG										
Mus musculus	Riken	ILMN_202618	ILMN_202618	C030018L16RIK	ri|C030018L16|PX00074P17|AK021095|1284					AK021095	C030018L16Rik		ILMN_1213121	004200719	S	1199	CCAAATCCAGGATCGACGTGCTGGTAGGCCCACAGAACATGAATTAAGAC										
Mus musculus	Riken	ILMN_207046	ILMN_207046	6530401I16RIK	ri|6530401I16|PX00048D21|AK078333|1820					AK078333	6530401I16Rik		ILMN_1243703	006380025	S	492	GCCCAGGAGCAGAGTCCCGGGCCTTCCCGCCCGTGTTCAGATTTTTAAAT										
Mus musculus	MEEBO	ILMN_222405	ILMN_222405	2810428I15RIK	scl34701.2.1_7	XM_147329.1			20864433	XM_147329.1	2810428I15Rik		ILMN_2749143	002570593	S	383	GATGGGGACACCAGGAGTGTCAGAACAGGACCCTGAAAAGTTGCACCAGC										
Mus musculus	MEEBO	ILMN_186214	ILMN_186214	C030013C21RIK	scl077417.1_158						C030013C21Rik		ILMN_1259749	007210689	S	1	GCTGTTGCCTACTGACTGCTTCCGGTTTCTAATCTCAGCTGTAACCCAAG										
Mus musculus	RefSeq	ILMN_209992	ILMN_209992	KDELC1	NM_023645.2	NM_023645.2		72050	31560064	NM_023645.2	Kdelc1	NP_076134.1	ILMN_1249999	003130215	S	1678	GAGCGAGCCCCAAATTCGAGAGGGTATGAAGAGGGTAGAGCCACAATCCG	1	-	44052348-44052397	1qC1.1	Mus musculus KDEL (Lys-Asp-Glu-Leu) containing 1 (Kdelc1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			5730416C13Rik; 1810049A15Rik; EP58; Kdel1	5730416C13Rik; 1810049A15Rik; EP58; Kdel1
Mus musculus	MEEBO	ILMN_223201	ILMN_223201	D630010B17RIK	scl47582.4.1_66	XM_286688.1			28486725	XM_286688.1	D630010B17Rik		ILMN_2760664	004200452	S	860	CCAACAGACCCCATACTCTCTTCTCTTTGGGTTGCTTCAACAGCAGCCTC										
Mus musculus	MEEBO	ILMN_185214	ILMN_185214	MJ-500-31_190	MJ-500-31_190						MJ-500-31_190		ILMN_2425143	002480681	S	20	ATGGCCGTTATATGGAATCATTGGAGTGCCAGTAATTCTACCACGCCTTA										
Mus musculus	RefSeq	ILMN_216158	ILMN_321899	E030042O20RIK	XM_001476920.1	XM_001476920.1		320474	149249451	XM_001476920.1	E030042O20Rik	XP_001476970.1	ILMN_2667938	006980386	S	1358	TACTTATAACCTTAAAATTTTACAATTTTTGAGTTGACACTCCTTTAGTA				2qC3	PREDICTED: Mus musculus RIKEN cDNA E030042O20 gene (E030042O20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_193338	ILMN_261914	TMEM33	NM_030108.1	NM_030108.1		67878	68533250	NM_030108.1	Tmem33	NP_084384.1	ILMN_2496263	005860019	S	2603	CTCTCACCGAGTTGGCTGTAATTTAATAGTAATCCATAGAGCAATTTCTT	5	+	67679936-67679985	5qC3.1	Mus musculus transmembrane protein 33 (Tmem33), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA388285; db83; 2700052H22Rik; 1600019D15Rik; AI426615; 1110006G02Rik; AI314185; 5430406L04Rik; 2410089A21Rik	AA388285; db83; 2700052H22Rik; 1600019D15Rik; AI426615; 1110006G02Rik; AI314185; 5430406L04Rik; 2410089A21Rik
Mus musculus	RefSeq	ILMN_193338	ILMN_261914	TMEM33	NM_030108.1	NM_030108.1		67878	68533250	NM_030108.1	Tmem33	NP_084384.1	ILMN_1234558	000990537	S	453	CAGCTGCCACTACCTGCTGTATTCACTCATCTTCGTCAACTCCTACCCTG	5	+	67655641-67655690	5qC3.1	Mus musculus transmembrane protein 33 (Tmem33), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA388285; db83; 2700052H22Rik; 1600019D15Rik; AI426615; 1110006G02Rik; AI314185; 5430406L04Rik; 2410089A21Rik	AA388285; db83; 2700052H22Rik; 1600019D15Rik; AI426615; 1110006G02Rik; AI314185; 5430406L04Rik; 2410089A21Rik
Mus musculus	RefSeq	ILMN_189797	ILMN_261914	TMEM33	NM_030108.1	NM_030108.1		67878	68533250	NM_030108.1	Tmem33	NP_084384.1	ILMN_1247023	000830390	S	5225	GACCTTTTTTCACTGTATGTACTTCATATGTCTAATATTTATTTCAAAAC	5	+	67682558-67682607	5qC3.1	Mus musculus transmembrane protein 33 (Tmem33), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA388285; db83; 2700052H22Rik; 1600019D15Rik; AI426615; 1110006G02Rik; AI314185; 5430406L04Rik; 2410089A21Rik	AA388285; db83; 2700052H22Rik; 1600019D15Rik; AI426615; 1110006G02Rik; AI314185; 5430406L04Rik; 2410089A21Rik
Mus musculus	RefSeq	ILMN_222593	ILMN_222593	1500001A10RIK	NM_026886.3	NM_026886.3		68955	126215551	NM_026886.3	1500001A10Rik	NP_081162.1	ILMN_1216168	000540246	S	3873	TGCTGATGCCACCATGAGAGGCCGGATAGCAGGTGTCTGGCACAGGAGTA	5	-	116892834-116892883	5qF	Mus musculus RIKEN cDNA 1500001A10 gene (1500001A10Rik), mRNA.				mKIAA1853; B230202K19Rik	mKIAA1853; B230202K19Rik
Mus musculus	MEEBO	ILMN_222175	ILMN_222175	1700029F12RIK	scl066479.2_132	XM_147162.1			20909299	XM_147162.1	1700029F12Rik		ILMN_2745779	002000154	S	419	CCTCTGACAGGTGGAACTGCTTTGGCCTGGTGTGCTATATTCAGACACAA										
Mus musculus	RefSeq	ILMN_200881	ILMN_313059	ITIH5L	XR_031663.1	XR_031663.1		634882	149272489	XR_031663.1	Itih5l		ILMN_1218012	007560390	S	3848	GCAAGAGGCTGCTGAAAGAGTCACCAAGGCTGCTTCCCCGCTGGACTTCA	X	+	147291368-147291417	XqF3	PREDICTED: Mus musculus inter-alpha (globulin) inhibitor H5-like (Itih5l), misc RNA.					
Mus musculus	Riken	ILMN_202591	ILMN_202591	5930404L04RIK	ri|5930404L04|PX00055K11|AK020027|1154					AK020027	5930404L04Rik		ILMN_1255694	007040072	S	1020	GGAATCCAGTGCCCTCTTCTGACCTCAGCAGCACCAGGCACATGTAGTAC										
Mus musculus	Riken	ILMN_205960	ILMN_205960	C230077C18RIK	ri|C230077C18|PX00176A24|AK048865|2455					AK048865	C230077C18Rik		ILMN_1231093	005130224	S	2303	CACTGTGTGTTCTCTCCTTCCACCACATGGGCCCTGGAATTGAACTCACC										
Mus musculus	Riken	ILMN_206843	ILMN_206843	D330050J08RIK	ri|D330050J08|PX00193B21|AK084836|1751					AK084836	D330050J08Rik		ILMN_2583087	004670592	S	1291	TGACTCACTGTCTGGGGTGTGGCTCCAGGGTCTAGGGTGGCTCAGCTGCT										
Mus musculus	RefSeq	ILMN_184251	ILMN_184251	V1RD2	NM_030741.1	NM_030741.1		81016	13507705	NM_030741.1	V1rd2	NP_109666.1	ILMN_2961313	001570113	S	1753	CCCCCAGCTCTGCCATCCTGTGGTAGTCTTGTAACCTAGTGGCCAGAGTG	7	+	5627958-5628007	7qA1	Mus musculus vomeronasal 1 receptor, D2 (V1rd2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC130511; V3R2	MGC130511; V3R2
Mus musculus	RefSeq	ILMN_213619	ILMN_213619	CAV2	NM_016900.3	NM_016900.3		12390	118131204	NM_016900.3	Cav2	NP_058596.1	ILMN_2689037	004830100	S	2143	TCAAAACTTTAACAATAAAATATCAGTTTAATAAATTATAAGCTTCAACC	6	+	17238681-17238730	6qA2	Mus musculus caveolin 2 (Cav2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IPI]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISO]	The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation [goid 1937] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence TAS]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]	AI447843	AI447843
Mus musculus	RefSeq	ILMN_213619	ILMN_213619	CAV2	NM_016900.3	NM_016900.3		12390	118131204	NM_016900.3	Cav2	NP_058596.1	ILMN_2639018	004480576	S	174	GGCTTCGAGGATCTGATTGCAGAGCCTGAGACTACACACTCCTTTGACAA	6	+	17231898-17231947	6qA2	Mus musculus caveolin 2 (Cav2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IPI]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISO]	The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation [goid 1937] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence TAS]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]	AI447843	AI447843
Mus musculus	MEEBO	ILMN_221801	ILMN_221801	4933400C23	scl36618.7.1_48				51765051	XM_489292	4933400C23		ILMN_2740504	003780176	S	1361	CTGAGGCTTTGAGACCTGATAGGTCATACCTAACTGTACAGAGATTGCTC										
Mus musculus	RefSeq	ILMN_207478	ILMN_207478	9530081K03RIK	XM_132025.1	XM_132025.1			20826103	XM_132025.1	9530081K03Rik		ILMN_1260511	001050463	I	741	GAGGCTCTGACCCAGCCACACTCCTGTTTCTTAGAGTCCTCCAGTGACTT										
Mus musculus	RefSeq	ILMN_208840	ILMN_208840	LTBP4	NM_175641.1	NM_175641.1		108075	32189329	NM_175641.1	Ltbp4	NP_783572.1	ILMN_2829262	005420747	S	5226	CAGTCTCGACTTAGGATGGACAGACACAGAGGGGTGCCTTCTATGGTGCC	7	-	28090265-28090314	7qA3	Mus musculus latent transforming growth factor beta binding protein 4 (Ltbp4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The regulated release of hormones, substances with a specific regulatory effect on a particular organ or group of cells [goid 46879] [evidence IMP]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2310046A13Rik	2310046A13Rik
Mus musculus	RefSeq	ILMN_208840	ILMN_208840	LTBP4	NM_175641.1	NM_175641.1		108075	32189329	NM_175641.1	Ltbp4	NP_783572.1	ILMN_2708681	005890707	S	3941	AATACCAGTCATTGTGTCCTCACGGCCGGGGCTACCTGGTGCCCAGTGGA	7	-	28095217-28095266	7qA3	Mus musculus latent transforming growth factor beta binding protein 4 (Ltbp4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The regulated release of hormones, substances with a specific regulatory effect on a particular organ or group of cells [goid 46879] [evidence IMP]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2310046A13Rik	2310046A13Rik
Mus musculus	RefSeq	ILMN_208840	ILMN_208840	LTBP4	NM_175641.1	NM_175641.1		108075	32189329	NM_175641.1	Ltbp4	NP_783572.1	ILMN_2590034	001570672	S	5053	CGCTGTATCTGTCGTCCAGGATTTGCTCCCACGCATCAGCCACATCACTG	7	-	28090438-28090487	7qA3	Mus musculus latent transforming growth factor beta binding protein 4 (Ltbp4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The regulated release of hormones, substances with a specific regulatory effect on a particular organ or group of cells [goid 46879] [evidence IMP]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2310046A13Rik	2310046A13Rik
Mus musculus	RefSeq	ILMN_220819	ILMN_220819	BCKDHA	NM_007533.4	NM_007533.4		12039	145966750	NM_007533.4	Bckdha	NP_031559.2	ILMN_2727329	006370189	S	1508	GGCTACTTCACTCCCTTCACCTGTTACAGTGCCTTTTAGGGGTGGGAAGG				7qA3	Mus musculus branched chain ketoacid dehydrogenase E1, alpha polypeptide (Bckdha), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]; Modulation of the activity of cyclin-dependent protein kinase 5 activator [goid 16536] [evidence IDA]; Catalysis of the reaction: 3-methyl-2-oxobutanoate + lipoamide = S-(2-methylpropanoyl)dihydrolipoamide + CO2 [goid 3863] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200234	ILMN_200234	LOC386023	XM_359036.1	XM_359036.1			38081021	XM_359036.1	LOC386023		ILMN_2538049	005860382	S	49	GAGGTAACCCAGACAAGAAAGGACAAACATGCTAGAAGCTGGAAAGAACC										
Mus musculus	RefSeq	ILMN_200274	ILMN_200274	LOC386123	XM_359079.1	XM_359079.1			38081169	XM_359079.1	LOC386123		ILMN_1237918	000990332	S	839	ATCCAGAAGATGCCCCAACTGGTATGAAGGACACATGCTCCACTACGTTC										
Mus musculus	Riken	ILMN_202830	ILMN_202830	6030419L17RIK	ri|6030419L17|PX00056D15|AK031386|1580					AK031386	6030419L17Rik		ILMN_2552631	000240215	S	1142	CTCTCAGTAGCCTCACACGGGTCATGTTTTCTGCATCTGCTCCGTATGGG										
Mus musculus	RefSeq	ILMN_213061	ILMN_213061	ADPGK	NM_028121.2	NM_028121.2		72141	70780371	NM_028121.2	Adpgk	NP_082397.1	ILMN_1215394	004230678	S	832	TGGTGGTCCTTTCTGGATTGCACATGATGGAGGGACAAAGCAAGGAGCTC	9	+	59160973-59161022	9qB	Mus musculus ADP-dependent glucokinase (Adpgk), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ADP + D-glucose = AMP + D-glucose 6-phosphate [goid 43843] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Adp-gk; 2610017G09Rik; C77577	Adp-gk; 2610017G09Rik; C77577
Mus musculus	RefSeq	ILMN_213061	ILMN_213061	ADPGK	NM_028121.2	NM_028121.2		72141	70780371	NM_028121.2	Adpgk	NP_082397.1	ILMN_2657876	005900601	S	934	GTATTCCAGTTCACCTAGAGCTGGCCAGTATGACCAACAGGGAGCTCATG	9	+	59161591-59161640	9qB	Mus musculus ADP-dependent glucokinase (Adpgk), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ADP + D-glucose = AMP + D-glucose 6-phosphate [goid 43843] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Adp-gk; 2610017G09Rik; C77577	Adp-gk; 2610017G09Rik; C77577
Mus musculus	MEEBO	ILMN_189544	ILMN_189544	UCC1	scl0094228.1_223	NM_053192.1			16716492	NM_053192.1	Ucc1		ILMN_2462240	000990324	S	3	TAAAGACCCCTCGGTGTTTACCCCTCCAAGCACGTGCCAGATGGCCCAAC										
Mus musculus	RefSeq	ILMN_222304	ILMN_251757	DUSP21	NM_028568.1	NM_028568.1		73547	58037324	NM_028568.1	Dusp21	NP_082844.1	ILMN_1213939	006480196	S	542	TACGAGTTCAAGCTGTTTAGTAGGAATACCGTTCGCATGATCTACTCTCC	X	+	17723537-17723586	XqA1.2	Mus musculus dual specificity phosphatase 21 (Dusp21), mRNA.				Dusp21; RP23-243E14.1; 1700094E07Rik	Dusp21; RP23-243E14.1; 1700094E07Rik
Mus musculus	RefSeq	ILMN_208728	ILMN_208728	SARS2	NM_023637.1	NM_023637.1		71984	12963764	NM_023637.1	Sars2	NP_076126.1	ILMN_3162754	002060047	I	1278	ACCAGTGCCTCCAACTGCACAGACTTCCAGAGCCGCCGCCTGTACATCAT	7	+	29537448-29537497	7qA3	Mus musculus seryl-aminoacyl-tRNA synthetase 2 (Sars2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6434] [evidence ISS]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + L-serine + tRNA(Ser) = AMP + diphosphate + L-seryl-tRNA(Ser) [goid 4828] [evidence ISS]	D7Ertd353e; 2410015F05Rik; SerRSmt	D7Ertd353e; 2410015F05Rik; SerRSmt
Mus musculus	MEEBO	ILMN_194140	ILMN_194140	WBSCR27	scl0079565.2_121	NM_024479.1			13277395	NM_024479.1	Wbscr27		ILMN_2503768	005690377	S	4	AATACCACTATTGAGGTGGGAGATGGGTGGGTCACTCAGCAGGTAACCGA								Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194140	ILMN_194140	WBSCR27	scl0079565.2_121	NM_024479.1			13277395	NM_024479.1	Wbscr27		ILMN_1235834	003930026	S	2	GTAATACCACTATTGAGGTGGGAGATGGGTGGGTCACTCAGCAGGTAACC								Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199332	ILMN_329089	LOC100042270	XM_001477847.1	XM_001477847.1		100042270	149267268	XM_001477847.1	LOC100042270	XP_001477897.1	ILMN_1249343	001770301	S	164	GGTGCCAGCAGAAGCCAGGGGAACCTCCTAATCTCCTTATTTCAGAAGGC	16	+	3521914-3521963	16qA1	PREDICTED: Mus musculus similar to Unknown (protein for MGC:41421) (LOC100042270), mRNA.					
Mus musculus	RefSeq	ILMN_196519	ILMN_196519	6330575B07RIK	XM_134032.2	XM_134032.2			38087803	XM_134032.2	6330575B07Rik		ILMN_1246256	001770373	S	250	TGGGATCCTCTGGTAGTACTATGTCCAATTTTCTGAGGAACCACCAGACT										
Mus musculus	Riken	ILMN_204790	ILMN_204790	PUM1	ri|D230050M22|PX00190C01|AK052145|1274					AK052145	Pum1		ILMN_2567626	005690369	S	1210	TCAGGACGGTGCAAACTGGAGTCCTCAGAACGATTTGTTGTCCCCCCCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189363	ILMN_239456	KCNJ3	NM_008426.1	NM_008426.1		16519	6680531	NM_008426.1	Kcnj3	NP_032452.1	ILMN_2714252	001820544	S	1428	TCCCATGAGCCAGTCTGTGGCCGATTTGCCACCAAAGCTTCAAAAGATGG	2	+	55447685-55447734	2qC1.1	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 3 (Kcnj3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 15467] [evidence TAS];  [goid 5242] [evidence IEA]	Kcnf3; MGC124234; Kir3.1; GIRK1; MGC124233	Kcnf3; MGC124234; Kir3.1; GIRK1; MGC124233
Mus musculus	RefSeq	ILMN_198190	ILMN_198190	LOC240116	XM_140055.2	XM_140055.2			38082623	XM_140055.2	LOC240116		ILMN_2530799	004490494	S	250	AAGATGCCAAAGGGCCCCAGCAGCAAACTCAGGCTTTCATCGCTCACCCC										
Mus musculus	RefSeq	ILMN_250486	ILMN_250486	CNOT3	NM_146176.1	NM_146176.1		232791	22122716	NM_146176.1	Cnot3	NP_666288.1	ILMN_2987161	002810246	S	2398	GATGTGGTTCCAGAGGCACGAGGAGCCTAAGACCATCACAGATGAGTTTG	7	+	3262540-3262589	7qA1	Mus musculus CCR4-NOT transcription complex, subunit 3 (Cnot3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MGC40675; A930039N10Rik	MGC40675; A930039N10Rik
Mus musculus	RefSeq	ILMN_214187	ILMN_214187	MVD	NM_138656.1	NM_138656.1		192156	20149735	NM_138656.1	Mvd	NP_619597.1	ILMN_2645275	002100097	S	1388	CTCTCAAGTGCCTCCGGTTCCCCGCTGGTTTCTGAAGGGCTAGCTGACCC	8	-	124957787-124957836	8qE1	Mus musculus mevalonate (diphospho) decarboxylase (Mvd), mRNA.		The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + (R)-5-diphosphomevalonate = ADP + phosphate + isopentenyl diphosphate + CO2 [goid 4163] [evidence IEA]	C78718	C78718
Mus musculus	RefSeq	ILMN_230291	ILMN_230291	GM694	NM_001033374.2	NM_001033374.2		277744	142385298	NM_001033374.2	Gm694	NP_001028546.1	ILMN_3160727	000070368	S	260	CGCCCCACCCATGAAGACCTTCGTTATGTTCCGTGGAAAAACCACGATGC	4	-	140989182-140989231	4qE1	Mus musculus gene model 694, (NCBI) (Gm694), mRNA.					
Mus musculus	RefSeq	ILMN_230100	ILMN_230100	PRR16	NM_001081224.1	NM_001081224.1		71373	124487026	NM_001081224.1	Prr16	NP_001074693.1	ILMN_2900012	003710543	S	774	AAAGGACAGGAGTCCTCAGGCAGGGCCTCGGGAACGAGTTCGGTTTAATG	18	+	51462680-51462729	18qD1	Mus musculus proline rich 16 (Prr16), mRNA.				AI607429; 5430406M13Rik	AI607429; 5430406M13Rik
Mus musculus	RefSeq	ILMN_211069	ILMN_211069	COX4I2	NM_053091.2	NM_053091.2		84682	118131189	NM_053091.2	Cox4i2	NP_444321.1	ILMN_2612178	001450750	S	551	AAGAAGGAGTGGAAAAAGTGACCAACGTCCCACGTCTGCCGCCAGCCCCT	2	+	152590597-152590617:152590618-152590646	2qH1	Mus musculus cytochrome c oxidase subunit IV isoform 2 (Cox4i2), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2) [goid 5751] [evidence ISA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence ISA]	CoxIV-2; Cox4b	CoxIV-2; Cox4b
Mus musculus	RefSeq	ILMN_219911	ILMN_219911	OLFR303	NM_146619.1	NM_146619.1		258612	33239357	NM_146619.1	Olfr303	NP_666830.1	ILMN_1244318	002680156	S	757	GGCACCATAATCTTTGCCTATGTCCGACCTCCAGCTAAGTACAACTTCAC	7	-	93543200-93543249	7qD3	Mus musculus olfactory receptor 303 (Olfr303), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR104-2	MOR104-2
Mus musculus	RefSeq	ILMN_185312	ILMN_254269	NPAS2	NM_008719.1	NM_008719.1		18143	6679101	NM_008719.1	Npas2	NP_032745.1	ILMN_2668835	000010731	S	3097	GGTTGGCCGTGGGAGATGGGATGAAGCGTTTACGTGATTTTGGCGCACCC	1	+	39418929-39418978	1qB	Mus musculus neuronal PAS domain protein 2 (Npas2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The rhythm of the locomotor activity of an organism during its 24 hour activity cycle [goid 45475] [evidence IMP]; The cycle from wakefulness through an orderly succession of sleep states and stages that occurs on an approximately 24 hour rhythm [goid 42745] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]	MOP4; MGC129355	MOP4; MGC129355
Mus musculus	RefSeq	ILMN_213608	ILMN_213608	NOL3	NM_030152.2	NM_030152.2		78688	31542180	NM_030152.2	Nol3	NP_084428.1	ILMN_2658953	006020603	S	1394	GGGGCGTGGGGTCTAACCAGTCACAGACATACACAAGGAGCTCTGCACAT	8	+	108169593-108169642	8qD3	Mus musculus nucleolar protein 3 (apoptosis repressor with CARD domain) (Nol3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The cytoplasm of a muscle fiber; includes the sarcoplasmic reticulum [goid 16528] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B430311C09Rik; ARC; NOP; Nop30; MYC	B430311C09Rik; ARC; NOP; Nop30; MYC
Mus musculus	RefSeq	ILMN_213608	ILMN_213608	NOL3	NM_030152.2	NM_030152.2		78688	31542180	NM_030152.2	Nol3	NP_084428.1	ILMN_2931033	005220243	S	659	TGAGCCAGACCTGGAACAAGAAATGAATCCAGAACAAGAGCCGGAGCCGG	8	+	108168739-108168788	8qD3	Mus musculus nucleolar protein 3 (apoptosis repressor with CARD domain) (Nol3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The cytoplasm of a muscle fiber; includes the sarcoplasmic reticulum [goid 16528] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B430311C09Rik; ARC; NOP; Nop30; MYC	B430311C09Rik; ARC; NOP; Nop30; MYC
Mus musculus	RefSeq	ILMN_192331	ILMN_214272	ABI2	NM_198127.1	NM_198127.1		329165	37693504	NM_198127.1	Abi2	NP_937760.1	ILMN_1228961	003520544	S	4228	GCAAACTCAGCAGTCCTGTGCTAATCCCTAGATGAGGACAAGTACCTCTC	1	+	60536641-60536690	1qC2	Mus musculus abl-interactor 2 (Abi2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	AI839867; 8430425M24Rik; C130078H13; MGC90855; MGC90836	AI839867; 8430425M24Rik; C130078H13; MGC90855; MGC90836
Mus musculus	RefSeq	ILMN_214272	ILMN_214272	ABI2	NM_198127.1	NM_198127.1		329165	37693504	NM_198127.1	Abi2	NP_937760.1	ILMN_3006644	000070746	S	5366	TATGATCTGGCAGTTACACTAAGGGTTCCCAGAGAGTTGGTGGTACTGAG	1	+	60537779-60537828	1qC2	Mus musculus abl-interactor 2 (Abi2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	AI839867; 8430425M24Rik; C130078H13; MGC90855; MGC90836	AI839867; 8430425M24Rik; C130078H13; MGC90855; MGC90836
Mus musculus	RefSeq	ILMN_214272	ILMN_214272	ABI2	NM_198127.1	NM_198127.1		329165	37693504	NM_198127.1	Abi2	NP_937760.1	ILMN_1225113	004730242	S	620	GATTACGTACCTAGCCCAACCCGTAATATGGCTCCCTCGCAGCAGAGCCC	1	+	60504158-60504207	1qC2	Mus musculus abl-interactor 2 (Abi2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	AI839867; 8430425M24Rik; C130078H13; MGC90855; MGC90836	AI839867; 8430425M24Rik; C130078H13; MGC90855; MGC90836
Mus musculus	RefSeq	ILMN_214272	ILMN_214272	ABI2	NM_198127.1	NM_198127.1		329165	37693504	NM_198127.1	Abi2	NP_937760.1	ILMN_3006643	006060441	S	5460	ACATTCCTTGTGTGCGCCATTAAGCACCTCCAGATGAATGAGGGACAGTC	1	+	60537873-60537922	1qC2	Mus musculus abl-interactor 2 (Abi2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	AI839867; 8430425M24Rik; C130078H13; MGC90855; MGC90836	AI839867; 8430425M24Rik; C130078H13; MGC90855; MGC90836
Mus musculus	MEEBO	ILMN_219563	ILMN_219563	5330431K02RIK	scl43611.1.1_320	NM_026606.1			21311888	NM_026606.1	5330431K02Rik		ILMN_1243921	005570097	S	1883	GGGTGCCTTCATCCCCCAGGGAGTTAATGACAGCTTGTTCACACCACCTA										
Mus musculus	Riken	ILMN_203009	ILMN_203009	5930437C20RIK	ri|5930437C20|PX00055P10|AK031249|3201					AK031249	5930437C20Rik		ILMN_1230783	003140037	S	3080	GAGCTGGGCCTTGTGGCACATCCCTGAGATTTCACCACTTCAGGAAGCTG										
Mus musculus	MEEBO	ILMN_193322	ILMN_193322	2600001B17RIK	scl39516.6_65				31711989	NM_172947	2600001B17Rik		ILMN_2496121	004560280	S	5	GCACCTCCAGGGTAGTCTCCTGGGGCAGAGTGCCACCACCTGAGTATCAG										
Mus musculus	RefSeq	ILMN_193870	ILMN_253281	SULF1	NM_172294.1	NM_172294.1		240725	26986616	NM_172294.1	Sulf1	NP_758498.1	ILMN_1222489	004290142	S	4411	CTAGGAAGGACAAAGGAATAGACCCCCGGCAAGGACACACAGTATGGATC	1	+	12850255-12850304	1qA3	Mus musculus sulfatase 1 (Sulf1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione [goid 6790] [evidence ISO]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [evidence ISO]; Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate [goid 8449] [evidence ISO]	AW121680; mKIAA1077; AI467640	AW121680; mKIAA1077; AI467640
Mus musculus	RefSeq	ILMN_209950	ILMN_209950	RGS16	NM_011267.2	NM_011267.2		19734	142388575	NM_011267.2	Rgs16	NP_035397.1	ILMN_2600744	003890528	S	2088	GCCTCCTCCCTACCAGACTCTACCTCTGCAAGCCTTGGGAATCACTGAGG	1	+	155592372-155592421	1qG3	Mus musculus regulator of G-protein signaling 16 (Rgs16), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	Rgsr; Rgs14	Rgsr; Rgs14
Mus musculus	MEEBO	ILMN_193522	ILMN_193522	SCL0002507.1_236	scl0002507.1_236	AK083573.1			26101341	AK083573.1	scl0002507.1_236		ILMN_2497957	001660445	S	16	AGCCCAGGGACTTGCTCCTGACCGTCAAGATGGATCTTTATCGCCACGGC										
Mus musculus	RefSeq	ILMN_215785	ILMN_215785	ATG12	NM_026217.1	NM_026217.1		67526	13385721	NM_026217.1	Atg12	NP_080493.1	ILMN_2663570	006130424	S	2187	CACAGAGCACTGTGGACAGTGGCTTATGCACAGTACAGCCTTAGGAAAAC	18	-	46857981-46858030	18qC	Mus musculus autophagy-related 12 (yeast) (Atg12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence TAS]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4931423H11Rik; Atg12l; A330058M13Rik; Apg12l	4931423H11Rik; Atg12l; A330058M13Rik; Apg12l
Mus musculus	MEEBO	ILMN_194593	ILMN_194593	ADORA3	scl22756.2.1_292				33468874	NM_009631	Adora3		ILMN_1226949	004540091	S	1604	GGCTGGACGTACAGAACCTGCGTTGAAGGATCCCTAGGAATGTTGGGAAC						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IMP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IMP]		
Mus musculus	MEEBO	ILMN_194593	ILMN_194593	ADORA3	scl22756.2.1_292				33468874	NM_009631	Adora3		ILMN_2507802	000610403	S	5	GCCAGGATGGAGGAATGAAATAAGTTAGGTATCACAAGATTTTATACAGA						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IMP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IMP]		
Mus musculus	RefSeq	ILMN_200792	ILMN_200792	LOC381862	XM_355874.1	XM_355874.1			38086190	XM_355874.1	LOC381862		ILMN_1251859	004180600	S	2774	TTTGCCCTCAACTGCCGTGCTCTGTCCTCCCAGAAACACCAGAAGGAGCC										
Mus musculus	RefSeq	ILMN_195345	ILMN_258951	CCDC49	NM_026186.3	NM_026186.3		67480	142379058	NM_026186.3	Ccdc49	NP_080462.1	ILMN_2600813	002510181	S	2721	ATTAAGCCATTTCGTTGTTCTACCAGTTCCTAATTTCTCCTAAAATATGT	11	-	97607263-97607312	11qD	Mus musculus coiled-coil domain containing 49 (Ccdc49), mRNA.				R75228; AA473636; 1300013D05Rik; MGC90568	R75228; AA473636; 1300013D05Rik; MGC90568
Mus musculus	MEEBO	ILMN_185545	ILMN_185545	SCL0002879.1_64	scl0002879.1_64	AK040943.1			26334074	AK040943.1	scl0002879.1_64		ILMN_1231683	005080711	S	19	CCAAGCCAGCCCATTCCACTTCAGTATCCATGTCCAAGCTGTCACTGCCC										
Mus musculus	RefSeq	ILMN_215742	ILMN_215742	LBH	NM_029999.3	NM_029999.3		77889	34328473	NM_029999.3	Lbh	NP_084275.3	ILMN_1233545	007650360	S	2499	CCTACCCCAGTTATCTGTCTTGGTCTTGCCGTGTGATGGGATGTGCTTGT	17	+	73290738-73290787	17qE1.3	Mus musculus limb-bud and heart (Lbh), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	6720416L16Rik; 1810009F10Rik	6720416L16Rik; 1810009F10Rik
Mus musculus	RefSeq	ILMN_215742	ILMN_215742	LBH	NM_029999.3	NM_029999.3		77889	34328473	NM_029999.3	Lbh	NP_084275.3	ILMN_2816180	005670440	S	2904	TTTCAGTGACATGCCTGTTGTGAGATGAACCTCCTGTGACTTCTGTCTGT	17	+	73291143-73291192	17qE1.3	Mus musculus limb-bud and heart (Lbh), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	6720416L16Rik; 1810009F10Rik	6720416L16Rik; 1810009F10Rik
Mus musculus	MEEBO	ILMN_219144	ILMN_219144	D730040F13RIK	scl24304.17.1_249				47777358	NM_175518	D730040F13Rik		ILMN_2704819	004120484	S	3443	ATCATTGCTTGTTTCTTCACTCAATCTTTTCATTGTCTCAGTGTACCAGC										
Mus musculus	MEEBO	ILMN_210873	ILMN_210873	5430405G05RIK	scl20134.3.1_312	XM_130642.3			28488119	XM_130642.3	5430405G05Rik		ILMN_2610064	003420112	S	1315	CCCGGCGGTGAGCTGTCACTATTGCTGTCACTCTCCCAGCAGTCCCTATT										
Mus musculus	RefSeq	ILMN_233185	ILMN_233185	PRDM4	NM_181650.2	NM_181650.2		72843	61676180	NM_181650.2	Prdm4	NP_857633.2	ILMN_2945238	001570139	S	3713	AGTCACTCCCTGTGAGCAGGCACACCCAGCTTTTCTCCAGAAGCGGACAC	10	-	85354869-85354918	10qC1	Mus musculus PR domain containing 4 (Prdm4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	SC-1; 1700031E19Rik; 2810470D21Rik; AW552272	SC-1; 1700031E19Rik; 2810470D21Rik; AW552272
Mus musculus	RefSeq	ILMN_210508	ILMN_226933	LOC635815	XM_991772.1	XM_991772.1		635815	94378702	XM_991772.1	LOC635815	XP_996866.1	ILMN_2606313	007200672	S	313	CATCAGCAGCCTGGAGTCTGACGATACAGCAACTTATTACTGTCTACAGC					PREDICTED: Mus musculus similar to Ig kappa chain V-V region L6 precursor (LOC635815), mRNA.					
Mus musculus	RefSeq	ILMN_223237	ILMN_256444	9330128J19RIK	NM_001042714.1	NM_001042714.1		271144	111607474	NM_001042714.1	9330128J19Rik	NP_001036179.1	ILMN_1250314	003310162	S	2899	GTCAACTTTGGCTATCTGATCCTAAGGACGTTCTGTTCTGAGATGGGATG	13	-	97186455-97186504	13qD1	Mus musculus RIKEN cDNA 9330128J19 gene (9330128J19Rik), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_259055	ILMN_259055	ENTPD5	NM_001026214.1	NM_001026214.1		12499	71061461	NM_001026214.1	Entpd5	NP_001021385.1	ILMN_3149143	002320292	A	4561	GGCCTCTGCAGCTGTGCGTGCGATGAGATCGTGTATTGTTTTATTACTGG	12	-	85715186-85715235	12qD1	Mus musculus ectonucleoside triphosphate diphosphohydrolase 5 (Entpd5), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]	NTPDase-5; Pcph; mNTPase; AI987697; AI196558; Cd39l4; ER-UDPase; NTPDase5	NTPDase-5; Pcph; mNTPase; AI987697; AI196558; Cd39l4; ER-UDPase; NTPDase5
Mus musculus	RefSeq	ILMN_259055	ILMN_259055	ENTPD5	NM_001026214.1	NM_001026214.1		12499	71061461	NM_001026214.1	Entpd5	NP_001021385.1	ILMN_3070469	003940612	I	154	CCGCCCACTTGGTGTAAAAGAAGAACCGGCCAAAGGGAGGGCCTGAAGGA	12	-	85737908-85737908:85740290-85740338	12qD1	Mus musculus ectonucleoside triphosphate diphosphohydrolase 5 (Entpd5), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]	NTPDase-5; Pcph; mNTPase; AI987697; AI196558; Cd39l4; ER-UDPase; NTPDase5	NTPDase-5; Pcph; mNTPase; AI987697; AI196558; Cd39l4; ER-UDPase; NTPDase5
Mus musculus	Riken	ILMN_206722	ILMN_206722	C230062L16RIK	ri|C230062L16|PX00175D21|AK082549|1529					AK082549	C230062L16Rik		ILMN_2582211	002320021	S	963	AGCAAAGCAAATCAAGGAGCTGGCGGATGTAAGTGCGGTCGCAGTCAGGT										
Mus musculus	RefSeq	ILMN_211190	ILMN_211190	AOAH	NM_012054.2	NM_012054.2		27052	31981308	NM_012054.2	Aoah	NP_036184.1	ILMN_2962737	005700538	S	2643	AGGTACCCCTGTGCTTGGTGTAGCCCACAGGTATGAGACAGTTGGCCCCA	13	+	21031445-21031494	13qA2	Mus musculus acyloxyacyl hydrolase (Aoah), mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide [goid 8653] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: 3-(acyloxy)acyl group of bacterial toxin = 3-hydroxyacyl group of bacterial toxin + a fatty acid [goid 50528] [evidence IDA]	MGC107583; 4930433E13Rik	MGC107583; 4930433E13Rik
Mus musculus	RefSeq	ILMN_215040	ILMN_234700	ZFP444	NM_028316.2	NM_028316.2		72667	142344196	NM_028316.2	Zfp444	NP_082592.1	ILMN_2654847	003290435	S	841	AGACCTTCTACTGGCGCGAGCACCTGGTGCGCCACCGCAAGACACACTCT	7	+	6141370-6141419	7qA1	Mus musculus zinc finger protein 444 (Zfp444), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mFLJ00134; FLJ00134; 6230401O10Rik; 2810031J10Rik	mFLJ00134; FLJ00134; 6230401O10Rik; 2810031J10Rik
Mus musculus	RefSeq	ILMN_190980	ILMN_310221	D3ERTD254E	XM_001475091.1	XM_001475091.1		241944	149250848	XM_001475091.1	D3Ertd254e	XP_001475141.1	ILMN_2475022	003930110	S	6128	GGAAAGATTGCCAATAGGTGTACCAAGTACTCTGGGACAGAAAGAGTAGG	3	+	36068703-36068752	3qB	PREDICTED: Mus musculus DNA segment, Chr 3, ERATO Doi 254, expressed (D3Ertd254e), mRNA.					
Mus musculus	RefSeq	ILMN_197488	ILMN_310221	D3ERTD254E	XM_001475091.1	XM_001475091.1		241944	149250848	XM_001475091.1	D3Ertd254e	XP_001475141.1	ILMN_2528305	003870204	S	2142	GCTTTTACCCAGAGGTCCAGCTTTACACGACACCAGAGGATCCACACTGG	3	+	36064717-36064766	3qB	PREDICTED: Mus musculus DNA segment, Chr 3, ERATO Doi 254, expressed (D3Ertd254e), mRNA.					
Mus musculus	Riken	ILMN_205117	ILMN_205117	E130318A13RIK	ri|E130318A13|PX00208H22|AK053879|2944					AK053879	E130318A13Rik		ILMN_2570121	004610750	S	2792	TCAGAGTGTGGTTTCAGCCTAGGGATTGTTAGAGCACTGTGGCTAAGAGC										
Mus musculus	RefSeq	ILMN_212064	ILMN_212064	PFKL	NM_008826.3	NM_008826.3		18641	142366236	NM_008826.3	Pfkl	NP_032852.2	ILMN_1236539	006650711	S	2645	CCAGCTGGCTGCCTCACCACACGGCTGAAAAGAGCCTCACTTTTTTAGAA	10	-	77453440-77453489	10qC1	Mus musculus phosphofructokinase, liver, B-type (Pfkl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IDA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AA407869	AA407869
Mus musculus	RefSeq	ILMN_215974	ILMN_215974	GNMT	NM_010321.1	NM_010321.1		14711	6754025	NM_010321.1	Gnmt	NP_034451.1	ILMN_2837816	001110288	S	697	CTGGCAGAGATGGCTCTCCTGGCTTCAGTAAGTTCCGGCTCTCTTACTAC	17	-	46862898-46862920:46863010-46863036	17qC	Mus musculus glycine N-methyltransferase (Gnmt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + glycine = S-adenosyl-L-homocysteine + sarcosine [goid 17174] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215974	ILMN_215974	GNMT	NM_010321.1	NM_010321.1		14711	6754025	NM_010321.1	Gnmt	NP_034451.1	ILMN_1221105	000770168	S	265	GCGTGGACGCCAGCGACAAGATGCTGAAATATGCGCTTAAGGAGCGCTGG	17	-	46864247-46864296	17qC	Mus musculus glycine N-methyltransferase (Gnmt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + glycine = S-adenosyl-L-homocysteine + sarcosine [goid 17174] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217999	ILMN_217999	OLFR177	scl0258998.1_232				22128944	NM_146996	Olfr177		ILMN_2774216	002030021	S	779	TTCGACCAAGTTCACTTAATGAAGGGTATAAAGACATACCTGTTGCTATA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215773	ILMN_215773	DYNC1LI1	NM_146229.2	NM_146229.2		235661	118130200	NM_146229.2	Dync1li1	NP_666341.1	ILMN_1255255	006560441	S	1684	CCCTTCCAAGTTGGAACTACGATGGGGCCGGAAGCTTTTACAAACAGACA	9	+	114632544-114632593	9qF3	Mus musculus dynein cytoplasmic 1 light intermediate chain 1 (Dync1li1), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [evidence ISS]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence ISS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence ISS]	MGC32416; LIC-1; Dnclic1; 1110053F02Rik	MGC32416; LIC-1; Dnclic1; 1110053F02Rik
Mus musculus	RefSeq	ILMN_193193	ILMN_193193	UTS2R	NM_145440.1	NM_145440.1		217369	21703877	NM_145440.1	Uts2r	NP_663415.1	ILMN_2494890	001440482	S	1436	GACCCTGGTGTGCTGAGTCATGTAAGGCCTAATTACCCAGAGCAGCTAGT	11	+	121023020-121023069	11qE2	Mus musculus urotensin 2 receptor (Uts2r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 1604] [evidence IEA]	UTR; UTR2; Gpr14	UTR; UTR2; Gpr14
Mus musculus	RefSeq	ILMN_184358	ILMN_184358	UBE2I	NM_011665.2	NM_011665.2		22196	31543913	NM_011665.2	Ube2i	NP_035795.1	ILMN_2786360	004560736	S	2477	GGGCAACAGATTAACCACTGTATCTACAAATGCTCTAATTAAAACATTTC	17	-	24988119-24988168	17qA3.3	Mus musculus ubiquitin-conjugating enzyme E2I (Ube2i), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with Helix Loop Helix, a domain of 40-50 residues that occurs in specific DNA-binding proteins that act as transcription factors. The domain is formed of two amphipathic helices joined by a variable length linker region that can form a loop and it mediates protein dimerization [goid 43398] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	UBC9; Ubce9; Mmubc9; Ubce2i; 5830467E05Rik	UBC9; Ubce9; Mmubc9; Ubce2i; 5830467E05Rik
Mus musculus	RefSeq	ILMN_215461	ILMN_215461	PPP1R14A	NM_026731.3	NM_026731.3		68458	133891709	NM_026731.3	Ppp1r14a	NP_081007.2	ILMN_2659824	007050484	S	230	CGGACGAGGTCAACATCGATGAGCTATTGGAATTGGACAGTGAAGAGGAA	7	+	30076542-30076591	7qB1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 14A (Ppp1r14a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110001M11Rik; Cpi17	1110001M11Rik; Cpi17
Mus musculus	RefSeq	ILMN_215461	ILMN_215461	PPP1R14A	NM_026731.3	NM_026731.3		68458	133891709	NM_026731.3	Ppp1r14a	NP_081007.2	ILMN_2729363	004040215	S	404	CAGATGACCCCAGCCTGAGCCCCCGCCAGGACCGGGCCCACACTGCCCCA	7	+	30078282-30078331	7qB1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 14A (Ppp1r14a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110001M11Rik; Cpi17	1110001M11Rik; Cpi17
Mus musculus	RefSeq	ILMN_191396	ILMN_234242	6230424H07RIK	XR_001535.2	XR_001535.2		76138	149260889	XR_001535.2	6230424H07Rik		ILMN_2478718	006020670	S	2288	GGTAATACTAATGTACAAGATGACTTTTCCAGAATTCAAGGCATCAGGGT	10	+	58038814-58038863	10qB4	PREDICTED: Mus musculus RIKEN cDNA 6230424H07 gene (6230424H07Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_196763	ILMN_196763	KLRA7	NM_014194.1	NM_014194.1			17432434	NM_014194.1	Klra7		ILMN_1241930	001660349	S	294	ACATGAACTACAGGAAACTCTAAATTGCCACGATAACTGCAGCCCCACGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196763	ILMN_196763	KLRA7	NM_014194.1	NM_014194.1			17432434	NM_014194.1	Klra7		ILMN_1227867	000620379	S	973	TCCTTGTGGAGACTGAACAGACCTACTCTGGTCCCCCAAAGCTTATCTGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196763	ILMN_196763	KLRA7	NM_014194.1	NM_014194.1			17432434	NM_014194.1	Klra7		ILMN_2608319	005570753	S	297	TGAACTACAGGAAACTCTAAATTGCCACGATAACTGCAGCCCCACGCAAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216144	ILMN_216144	IARS2	NM_198653.1	NM_198653.1		381314	38490689	NM_198653.1	Iars2	NP_941055.1	ILMN_2667814	006590349	S	3157	CCTGATGTCAACAGACGACGACACTCCCCACAGTACTGACTGGCTGAGGA	1	-	186987783-186987832	1qH5	Mus musculus isoleucine-tRNA synthetase 2, mitochondrial (Iars2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2010002H18Rik; C79125; MGC63429	2010002H18Rik; C79125; MGC63429
Mus musculus	RefSeq	ILMN_216144	ILMN_216144	IARS2	NM_198653.1	NM_198653.1		381314	38490689	NM_198653.1	Iars2	NP_941055.1	ILMN_3146224	003830463	A	2902	GCTGAATGAGCTGATGATGGCTTCCCAGACGACATTGCTGGCTCAGGAGC	1	-	186988886-186988935	1qH5	Mus musculus isoleucine-tRNA synthetase 2, mitochondrial (Iars2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2010002H18Rik; C79125; MGC63429	2010002H18Rik; C79125; MGC63429
Mus musculus	MEEBO	ILMN_224020	ILMN_224020	DORZ1	scl35395.12.1_98				22095336	NM_145919	Dorz1		ILMN_2773286	001850754	S	968	GGTCATGCCTGCTACCTCCACAAGCCAGAAGCCTTCCACCTCGCCCTTCT										
Mus musculus	Riken	ILMN_206656	ILMN_206656	E530004K11RIK	ri|E530004K11|PX00319I17|AK089126|1583					AK089126	E530004K11Rik		ILMN_1229142	005340673	S	1464	CCCCAGTACCCCGTGAGGTAAGTTCTGATCACTGCAAGTTTGAGGTCAGC										
Mus musculus	MEEBO	ILMN_187140	ILMN_187140	CLSTN1	scl24688.19_192				12746425	NM_023051	Clstn1		ILMN_2441501	001240296	S	9	CACCAAAAGGAGACCCCGAGGCCCAAAGATAAACTGCTACAATGCTCCAG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence NAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]		
Mus musculus	RefSeq	ILMN_192959	ILMN_226304	CMC1	NM_026442.2	NM_026442.2		67899	27754059	NM_026442.2	Cmc1	NP_080718.1	ILMN_2756628	003120470	S	373	CGCTCATCAGGAAGTCCCGTCTTACGGAAGCCAGTTATCACTTAACCCAG	9	-	117974289-117974338	9qF3	Mus musculus COX assembly mitochondrial protein homolog (S. cerevisiae) (Cmc1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI596001; 2010312P05Rik	AI596001; 2010312P05Rik
Mus musculus	MEEBO	ILMN_192240	ILMN_192240	BC026657	scl21233.1.1_48				46391099	NM_029895	BC026657		ILMN_1224120	007050411	S	14	GGTGCCATCTTTACTGCCACCAATACATTATATCAAAGTACCTGAGACTC										
Mus musculus	MEEBO	ILMN_192240	ILMN_192240	BC026657	scl21233.1.1_48				46391099	NM_029895	BC026657		ILMN_1223457	001440491	S	19	CTGAGGATCTACAGTCTCTGGGTTTGAGTGAACTTTGGCCACCTGCTAGG										
Mus musculus	RefSeq	ILMN_185830	ILMN_185830	UBE1X	NM_009457.2	NM_009457.2		22201	31981930	NM_009457.2	Ube1x	NP_033483.1	ILMN_2825301	003290112	S	3856	GGCTCACAACCATCTGTAATGGTGGGTCTGAAGGGAGTGACAGTATACAC	X	+	19840045-19840094	XqA1.3	Mus musculus ubiquitin-activating enzyme E1, Chr X (Ube1x), mRNA.				A1S9; AA989744; Ube-1; Sbx	A1S9; AA989744; Ube-1; Sbx
Mus musculus	RefSeq	ILMN_231126	ILMN_231126	MTERF	NM_001013023.2	NM_001013023.2		545725	111161446	NM_001013023.2	Mterf	NP_001013041.2	ILMN_3109573	001070441	A	1257	TCGGACAGGTGTGGCACTGGTTCCAGTTTGGACTTTTAAAACAGGAGAGG	5	-	3890650-3890699	5qA1	Mus musculus mitochondrial transcription termination factor (Mterf), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4931431L11Rik; 9230106K09Rik	4931431L11Rik; 9230106K09Rik
Mus musculus	RefSeq	ILMN_199453	ILMN_199453	LOC383492	XM_357092.1	XM_357092.1			38049390	XM_357092.1	LOC383492		ILMN_1216065	005260041	S	323	AAGGTCAGCTTGGCATCCGAGAGTGTCCCACAACGGGTATCACAGAGGCC										
Mus musculus	RefSeq	ILMN_212502	ILMN_212502	ANP32A	NM_009672.2	NM_009672.2		11737	40254599	NM_009672.2	Anp32a	NP_033802.2	ILMN_1222637	001090142	S	1885	CCCTGCGTCTCATTGGTACAGAACAACTGCCACTCATTTTTCTCCCGCCC	9	+	62226490-62226539	9qB	Mus musculus acidic (leucine-rich) nuclear phosphoprotein 32 family, member A (Anp32a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	pp32; W91701; PHAP1; I1PP2A; LANP; Anp32	pp32; W91701; PHAP1; I1PP2A; LANP; Anp32
Mus musculus	RefSeq	ILMN_212502	ILMN_212502	ANP32A	NM_009672.2	NM_009672.2		11737	40254599	NM_009672.2	Anp32a	NP_033802.2	ILMN_2685507	004920736	S	504	ACCTCGATGGCTATGACAGGGACAACAAGGAGGCCCCCGACTCCGATGTT	9	+	62221395-62221444	9qB	Mus musculus acidic (leucine-rich) nuclear phosphoprotein 32 family, member A (Anp32a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	pp32; W91701; PHAP1; I1PP2A; LANP; Anp32	pp32; W91701; PHAP1; I1PP2A; LANP; Anp32
Mus musculus	RefSeq	ILMN_212502	ILMN_212502	ANP32A	NM_009672.2	NM_009672.2		11737	40254599	NM_009672.2	Anp32a	NP_033802.2	ILMN_1230271	002600343	S	826	CCTGTTTGGGGAAATTCCTATTGTGATTTGACTGTTTTTACCCATATCCC	9	+	62225431-62225480	9qB	Mus musculus acidic (leucine-rich) nuclear phosphoprotein 32 family, member A (Anp32a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	pp32; W91701; PHAP1; I1PP2A; LANP; Anp32	pp32; W91701; PHAP1; I1PP2A; LANP; Anp32
Mus musculus	RefSeq	ILMN_222699	ILMN_222699	ORF63	NM_144854.1	NM_144854.1		224419	21450068	NM_144854.1	ORF63	NP_659103.1	ILMN_1260025	001400747	S	1605	TCTGTTTCCAGTCACGTGACTTCTTTTTCATTAAACGTGGATCCAAAGTG	16	+	87595534-87595578	16qC3.3	Mus musculus open reading frame 63 (ORF63), mRNA.				C21orf7	C21orf7
Mus musculus	RefSeq	ILMN_184309	ILMN_184309	ZFP608	NM_175751.3	NM_175751.3		269023	113199756	NM_175751.3	Zfp608	NP_786927.2	ILMN_1243263	007160025	S	5175	GTCATGTTGAAAGTGTTAGCCACAACAGGCTGCTTACATTCTTTTCCTTT	18	-	55048319-55048368	18qD3	Mus musculus zinc finger protein 608 (Zfp608), mRNA. XM_001000874 XM_001000888 XM_001000902 XM_001000914 XM_993937 XM_993952 XM_993993 XM_994038 XM_994057 XM_994076	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4932417D18Rik; MGC116601	4932417D18Rik; MGC116601
Mus musculus	RefSeq	ILMN_203787	ILMN_184309	ZFP608	NM_175751.3	NM_175751.3		269023	113199756	NM_175751.3	Zfp608	NP_786927.2	ILMN_2559976	004810408	S	1646	TGCAGAGCAAGAACAGAGGGGGAGCCAATGGGAAAGGGAGGCGTGGCAGC	18	-	55059104-55059153	18qD3	Mus musculus zinc finger protein 608 (Zfp608), mRNA. XM_001000874 XM_001000888 XM_001000902 XM_001000914 XM_993937 XM_993952 XM_993993 XM_994038 XM_994057 XM_994076	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4932417D18Rik; MGC116601	4932417D18Rik; MGC116601
Mus musculus	RefSeq	ILMN_184309	ILMN_184309	ZFP608	NM_175751.3	NM_175751.3		269023	113199756	NM_175751.3	Zfp608	NP_786927.2	ILMN_2939367	004210113	S	5586	ACCAGAGACATCTGCGATCTCTCTCTTACTTGAATAGCCCTGCAGTCTTC	18	-	55047908-55047957	18qD3	Mus musculus zinc finger protein 608 (Zfp608), mRNA. XM_001000874 XM_001000888 XM_001000902 XM_001000914 XM_993937 XM_993952 XM_993993 XM_994038 XM_994057 XM_994076	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4932417D18Rik; MGC116601	4932417D18Rik; MGC116601
Mus musculus	RefSeq	ILMN_216853	ILMN_216853	SCARF2	NM_153790.2	NM_153790.2		224024	141803416	NM_153790.2	Scarf2	NP_722485.1	ILMN_2676127	003170326	S	3237	TCCCATCTGGGACCTTCTGGATGGGCTCCTCATAGCAGGCCAAAGCTTTC	16	+	17806444-17806493	16qA3	Mus musculus scavenger receptor class F, member 2 (Scarf2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IDA]	W53987; SRECRP-1; Scatf1; Scarf1; SrecII; SREC-II; W65560; NSR1; AI194363; Srec2	W53987; SRECRP-1; Scatf1; Scarf1; SrecII; SREC-II; W65560; NSR1; AI194363; Srec2
Mus musculus	RefSeq	ILMN_217513	ILMN_217513	DSE	NM_172508.2	NM_172508.2		212898	34328374	NM_172508.2	Dse	NP_766096.1	ILMN_2684157	005700193	S	3995	TGGTATTTGTGGCTTTTCGATAAATAATACAATAACAGGTAATTTCATAT	10	-	33871379-33871428	10qB1	Mus musculus dermatan sulfate epimerase (Dse), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: chondroitin D-glucuronate = dermatan L-iduronate [goid 47757] [evidence IEA]	AI480506; B130024B19Rik; 6030499O08; Sart2	AI480506; B130024B19Rik; 6030499O08; Sart2
Mus musculus	RefSeq	ILMN_200024	ILMN_326785	LOC100046250	XM_001475873.1	XM_001475873.1		100046250	149267777	XM_001475873.1	LOC100046250	XP_001475923.1	ILMN_2537327	001690047	S	295	TCTCATAGCAGTTACAGCTGCCATGTCACTCATGAAGGGAACACTGTGGA					PREDICTED: Mus musculus similar to Unknown (protein for MGC:140959) (LOC100046250), mRNA.					
Mus musculus	RefSeq	ILMN_214232	ILMN_252833	2310047M10RIK	NM_028005.3	NM_028005.3		71923	142369094	NM_028005.3	2310047M10Rik	NP_082281.2	ILMN_2645763	005690753	S	1481	CGGCTATCCGGATCCCAATGGTCACACACCTCAAGTGCCAGGGGCTTTAG	11	+	68874757-68874806	11qB3	Mus musculus RIKEN cDNA 2310047M10 gene (2310047M10Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RP23-19I2.4	RP23-19I2.4
Mus musculus	RefSeq	ILMN_197758	ILMN_253159	FOXRED2	NM_001017983.1	NM_001017983.1		239554	67972420	NM_001017983.1	Foxred2	NP_001017983.1	ILMN_1246896	004730601	S	1828	TTATGCAGAGTCCTGTTTCCTGTTCACACTCACACGCCAGAGGCTGCCGC	15	-	77773780-77773822:77776009-77776015	15qE1	Mus musculus FAD-dependent oxidoreductase domain containing 2 (Foxred2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	Gm304; D15Bwg0759e; A430097D04Rik	Gm304; D15Bwg0759e; A430097D04Rik
Mus musculus	RefSeq	ILMN_253159	ILMN_253159	FOXRED2	NM_001017983.1	NM_001017983.1		239554	67972420	NM_001017983.1	Foxred2	NP_001017983.1	ILMN_3009521	004290424	S	4088	CGGTGTCCTAGCATTAGGGTGGCCAGGGCAGGAGAACTGAGGTTTAAAGC	15	-	77771520-77771569	15qE1	Mus musculus FAD-dependent oxidoreductase domain containing 2 (Foxred2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	Gm304; D15Bwg0759e; A430097D04Rik	Gm304; D15Bwg0759e; A430097D04Rik
Mus musculus	Riken	ILMN_206308	ILMN_206308	D030059N20RIK	ri|D030059N20|PX00181O02|AK083653|2811					AK083653	D030059N20Rik		ILMN_1244637	003170360	S	2153	GGGTTGGCCTATATAATATTCAGCCTGGAAACAGCCTGCCTAGAAGAAAT										
Mus musculus	RefSeq	ILMN_210728	ILMN_210728	SF3B1	NM_031179.1	NM_031179.1		81898	14042920	NM_031179.1	Sf3b1	NP_112456.1	ILMN_1235259	000620546	S	6011	GGAGGAATTCATGTTCTTAAGGGGACAGAGGGGTGGGTTTTTCTCTGGGC	1	-	55042169-55042218	1qC1.2	Mus musculus splicing factor 3b, subunit 1 (Sf3b1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence ISO]	The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [evidence ISO]	2810001M05Rik; Prp10; Targ4; AA409119; TA-8; SF3b155; SAP155; 155kDa	2810001M05Rik; Prp10; Targ4; AA409119; TA-8; SF3b155; SAP155; 155kDa
Mus musculus	Riken	ILMN_207083	ILMN_207083	C130085D15RIK	ri|C130085D15|PX00666B08|AK081890|2974					AK081890	C130085D15Rik		ILMN_2584915	006980743	S	2838	GCCTCAGTTTCTCTACCCGTAAGATGAGACAAGAGTTGGACACCTAGCCC										
Mus musculus	Riken	ILMN_204727	ILMN_204727	B930024A20RIK	ri|B930024A20|PX00163G08|AK047124|2490					AK047124	B930024A20Rik		ILMN_2567171	005910433	S	1657	GAAGAAAGGGCAGTTTTGCCTAGGGGCAGCTTGCCAGATTTGAAGCAAAC										
Mus musculus	RefSeq	ILMN_186245	ILMN_237446	DMD	NM_007868.3	NM_007868.3		13405	145966760	NM_007868.3	Dmd	NP_031894.1	ILMN_2672006	003940278	S	169	TACCAAGATTTTTATCCCTGCCTTGATATATACTTTTTCTTCCAAATGCT				XqB-qC1	Mus musculus dystrophin, muscular dystrophy (Dmd), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with the enzyme nitric-oxide synthase [goid 50998] [evidence IPI]	pke; mdx; DXSmh7; DXSmh9; Dp427	pke; mdx; DXSmh7; DXSmh9; Dp427
Mus musculus	RefSeq	ILMN_214631	ILMN_261841	ADAMTSL2	NM_029981.1	NM_029981.1		77794	58037506	NM_029981.1	Adamtsl2	NP_084257.1	ILMN_2650115	003310682	S	3183	AAGGGACTTCTCAGATGGAGCCACCCTGCTGCGGAAGCTGCACATGCACT	2	+	26964074-26964123	2qA3	Mus musculus ADAMTS-like 2 (Adamtsl2), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A930008K15Rik; tcp-1	A930008K15Rik; tcp-1
Mus musculus	RefSeq	ILMN_198393	ILMN_229056	NAALADL1	NM_001009546.1	NM_001009546.1		381204	57222281	NM_001009546.1	Naaladl1	NP_001009546.1	ILMN_2531527	002600014	S	2158	GAAGTACAGAGGCAGCTTAGCATTGTAGTAACGGCCCTGGAGGGTGCGGC	19	+	6115475-6115524	19qA	Mus musculus N-acetylated alpha-linked acidic dipeptidase-like 1 (Naaladl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	Naaladasel; Gm964	Naaladasel; Gm964
Mus musculus	RefSeq	ILMN_229056	ILMN_229056	NAALADL1	NM_001009546.1	NM_001009546.1		381204	57222281	NM_001009546.1	Naaladl1	NP_001009546.1	ILMN_3018394	004180709	I	2078	CCTCTGTAGACACATTCCCAGGTCTGGCCAACGCTTATGCCAAGGCCCAG	19	+	6115395-6115444	19qA	Mus musculus N-acetylated alpha-linked acidic dipeptidase-like 1 (Naaladl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	Naaladasel; Gm964	Naaladasel; Gm964
Mus musculus	RefSeq	ILMN_229056	ILMN_229056	NAALADL1	NM_001009546.1	NM_001009546.1		381204	57222281	NM_001009546.1	Naaladl1	NP_001009546.1	ILMN_3090143	007610209	A	1907	CAGCTGCATCCTTGGGTGAGCACATCTTGACCCTGCAGAAGAGCAGCCCT	19	+	6114890-6114939	19qA	Mus musculus N-acetylated alpha-linked acidic dipeptidase-like 1 (Naaladl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	Naaladasel; Gm964	Naaladasel; Gm964
Mus musculus	RefSeq	ILMN_185489	ILMN_257859	ATPAF1	NM_181040.2	NM_181040.2		230649	31341104	NM_181040.2	Atpaf1	NP_851383.1	ILMN_1258359	004850632	S	2096	CCAACCTTATGACCTCAAAGCACTCCCTGTCCCACACCTGTCATTTGGTC	4	+	115484856-115484905	4qD1	Mus musculus ATP synthase mitochondrial F1 complex assembly factor 1 (Atpaf1), nuclear gene encoding mitochondrial protein, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI593252; ATP11p; 6330547J17Rik; ATP11	AI593252; ATP11p; 6330547J17Rik; ATP11
Mus musculus	RefSeq	ILMN_223154	ILMN_223154	PPFIBP2	NM_008905.1	NM_008905.1		19024	6679434	NM_008905.1	Ppfibp2	NP_032931.1	ILMN_2760001	004850097	S	2549	CAAAATGGCCTCACCCGCCTACACACCTCTGACCACCACCGCCAAAGTTC	7	+	114886556-114886605	7qE3	Mus musculus protein tyrosine phosphatase, receptor-type, F interacting protein, binding protein 2 (Ppfibp2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cclp1; MGC117695	Cclp1; MGC117695
Mus musculus	RefSeq	ILMN_223154	ILMN_223154	PPFIBP2	NM_008905.1	NM_008905.1		19024	6679434	NM_008905.1	Ppfibp2	NP_032931.1	ILMN_2964841	000430403	S	3092	GGCAGGCCCTGGGTAATCGCAAAAGGTTCAGTTCTCAGACGCTGCCCCTA	7	+	114888181-114888230	7qE3	Mus musculus protein tyrosine phosphatase, receptor-type, F interacting protein, binding protein 2 (Ppfibp2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cclp1; MGC117695	Cclp1; MGC117695
Mus musculus	RefSeq	ILMN_214895	ILMN_317063	FBXL16	XM_001479823.1	XM_001479823.1		214931	149268681	XM_001479823.1	Fbxl16	XP_001479873.1	ILMN_2653194	000010021	S	2980	AGTGGTCAGGAGCCAGATTTGTCAGCCCCTCTTCCCACAGTCCCCCAACA	17	+	25957895-25957944	17qA3.3	PREDICTED: Mus musculus F-box and leucine-rich repeat protein 16, transcript variant 1 (Fbxl16), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_221421	ILMN_221421	9330159F19RIK	scl0212448.8_306	XM_137017.3			28495280	XM_137017.3	9330159F19Rik		ILMN_1246468	003370427	S	3160	CTTGTTTCTCGGAGCCAGTATCATTAGACTGCCTTAATAATGACAGGAGG										
Mus musculus	RefSeq	ILMN_209561	ILMN_209561	CLCNKA	NM_024412.2	NM_024412.2		12733	31981385	NM_024412.2	Clcnka	NP_077723.2	ILMN_1250227	004760767	S	2255	GCTGAACAGGGCTCCACATTTATCACGGCCCCCCGAGAGGACAACATCTC	4	-	140940623-140940672	4qE1	Mus musculus chloride channel Ka (Clcnka), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Any process that modulates the levels of body fluids [goid 50878] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	CLC-K1; C75963; Clcnk1	CLC-K1; C75963; Clcnk1
Mus musculus	RefSeq	ILMN_228766	ILMN_228766	DNAJC10	NM_024181.2	NM_024181.2		66861	119508442	NM_024181.2	Dnajc10	NP_077143.2	ILMN_3051651	001580161	I	304	GCGACCTGAGGATGGGGCAGTAGCTGAGGACGCCGAGGTTAACATTTCTG	2	+	80155926-80155962:80157406-80157418	2qC3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 10 (Dnajc10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	D2Ertd706e; JPDI; ERdj5; 1200006L06Rik	D2Ertd706e; JPDI; ERdj5; 1200006L06Rik
Mus musculus	RefSeq	ILMN_228766	ILMN_228766	DNAJC10	NM_024181.2	NM_024181.2		66861	119508442	NM_024181.2	Dnajc10	NP_077143.2	ILMN_3128019	001940445	A	3978	CAGTTCTCTCCCGGTGTGTGGGGTGGTCAGAGGATGCCAGTGAATAAAGT	2	+	80194136-80194185	2qC3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 10 (Dnajc10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	D2Ertd706e; JPDI; ERdj5; 1200006L06Rik	D2Ertd706e; JPDI; ERdj5; 1200006L06Rik
Mus musculus	MEEBO	ILMN_223971	ILMN_223971	6030405A18	scl22155.5.1_273				31342840	NM_177854	6030405A18		ILMN_2772452	000290524	S	2966	CGGTGGAAAAGAGGCATCGCCACTAAGCATTGTAGAACTTGGGAGGAATC										
Mus musculus	Riken	ILMN_204634	ILMN_204634	C730029N23RIK	ri|C730029N23|PX00087I09|AK050243|3039					AK050243	C730029N23Rik		ILMN_1255622	006590327	S	2913	TAGTACCTGACCCTGGTGGGAGAAAAAAATAAGATGGGGCGCGGGGGGGG										
Mus musculus	RefSeq	ILMN_201592	ILMN_201592	SIX5	XM_133221.2	XM_133221.2			38086002	XM_133221.2	Six5		ILMN_2543063	001110161	S	1784	TGGAACTGAGCACAGGAGTAGAAGGGCTGGGGACACAGGCCACCCACACT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	MEEBO	ILMN_215022	ILMN_215022	OLFR126	scl00258892.1_319	NM_146890.1			22129106	NM_146890.1	Olfr126		ILMN_2775788	002120408	S	882	TGAGTCCTTGAAAAGAGCACTAAAGAAGTTACTGCTAAGTGAAGAATTCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_206253	ILMN_326036	LOC100043697	XM_001480757.1	XM_001480757.1		100043697	149268819	XM_001480757.1	LOC100043697	XP_001480807.1	ILMN_1215216	004880129	S	1106	CTTAAGGCTGTGCTATCCTGAGCTCCTCGGGACGAGGCATGGTTTTCCCC	17	+	81128575-81128624	17qE3	PREDICTED: Mus musculus hypothetical protein LOC100043697 (LOC100043697), mRNA.					
Mus musculus	RefSeq	ILMN_185924	ILMN_185924	TOP3A	NM_009410.2	NM_009410.2		21975	142344076	NM_009410.2	Top3a	NP_033436.1	ILMN_1249579	000290292	S	3381	TGGCCTTCTTTTGTTGAGTACAAAGACCAGACATGTCTGGAGAGTCTGGC	11	-	60553870-60553919	11qB2	Mus musculus topoisomerase (DNA) III alpha (Top3a), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA [goid 3916] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC106383	MGC106383
Mus musculus	RefSeq	ILMN_200765	ILMN_200765	LOC384541	XM_357701.1	XM_357701.1			38085964	XM_357701.1	LOC384541		ILMN_2539922	006960452	S	199	CAAATCAGAGAAAAAGAATGGAGTTTTCTGCATCCCCACATCTTAGTGGG										
Mus musculus	RefSeq	ILMN_211128	ILMN_211128	TKTL2	NM_028927.3	NM_028927.3		74419	148287021	NM_028927.3	Tktl2	NP_083203.2	ILMN_2772043	001340343	S	1941	GCCCAGGCTTCATACATCAAGGTTGTTGGCTTTGGTCTTAAACTCTGATA				8qB3.2	Mus musculus transketolase-like 2 (Tktl2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [evidence IEA]	4933401I19Rik	4933401I19Rik
Mus musculus	RefSeq	ILMN_211128	ILMN_211128	TKTL2	NM_028927.3	NM_028927.3		74419	148287021	NM_028927.3	Tktl2	NP_083203.2	ILMN_2612812	007550471	S	1806	CTGACATAGTCGTTCGTCAACTTGCAGTAACAGAAGTACCTCGAAGCGGG				8qB3.2	Mus musculus transketolase-like 2 (Tktl2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [evidence IEA]	4933401I19Rik	4933401I19Rik
Mus musculus	RefSeq	ILMN_218721	ILMN_313790	UBP1	NM_001083319.1	NM_001083319.1		22221	134032031	NM_001083319.1	Ubp1	NP_001076788.1	ILMN_2699391	002120300	S	1254	AGATGCAGTTGAACATGAGCAGAAAAAGTCCAGCAAGCGGACTTTGCCAG	9	+	113868517-113868566	9qF3	Mus musculus upstream binding protein 1 (Ubp1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Cp2b; LBP-1b; LBP-1a; NF2d9	Cp2b; LBP-1b; LBP-1a; NF2d9
Mus musculus	RefSeq	ILMN_190956	ILMN_313790	UBP1	NM_001083319.1	NM_001083319.1		22221	134032031	NM_001083319.1	Ubp1	NP_001076788.1	ILMN_2746776	000380743	S	3795	AGCAGACTGCTGGTGCCATGGGCCAGGTATAGTTTCACTGAGACGGCCTA	9	+	113886262-113886311	9qF3	Mus musculus upstream binding protein 1 (Ubp1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Cp2b; LBP-1b; LBP-1a; NF2d9	Cp2b; LBP-1b; LBP-1a; NF2d9
Mus musculus	MEEBO	ILMN_208952	ILMN_208952	ELAVL4	scl23986.1.1_14	NM_010488.1			6754265	NM_010488.1	Elavl4		ILMN_1212745	003170088	S	23	AGTGAGAAGCGACTCGTCCGGCGTCCTCGAGCCCGCCGTGCCCGCTGGGG								Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213495	ILMN_213495	BC013529	NM_145418.3	NM_145418.3		215751	146149321	NM_145418.3	BC013529	NP_663393.1	ILMN_2637630	005670075	S	1462	AACCCCTTACCTTGAATGCACCAGGATTTATAATAGTGACATGGTCTCAC				10qA1	Mus musculus cDNA sequence BC013529 (BC013529), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA589616; MGC19209	AA589616; MGC19209
Mus musculus	Riken	ILMN_202442	ILMN_202442	4930402H24RIK	ri|4930402H24|PX00029P03|AK015050|2157					AK015050	4930402H24Rik		ILMN_1238511	003170142	S	1835	GGGCTGCTTTGGTTAGGTGTTAGTGTCATCCCCTTCTGACACAGGCTGCG										
Mus musculus	RefSeq	ILMN_221975	ILMN_221975	OLFR623	NM_147122.1	NM_147122.1		259126	22128756	NM_147122.1	Olfr623	NP_667333.1	ILMN_2919101	003520121	S	7	GTAATTTGGCTCAACACCTCAACCTACCCATTCCTGCTCACAGGCTTCCC	7	-	110809706-110809755	7qE3	Mus musculus olfactory receptor 623 (Olfr623), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR1-4	MOR1-4
Mus musculus	RefSeq	ILMN_198528	ILMN_323466	LOC669520	XM_001481253.1	XM_001481253.1		669520	149271041	XM_001481253.1	LOC669520	XP_001481303.1	ILMN_1246698	006270209	S	254	AATCCCCCAGAAGGGAGAATGGGCCAACCTGGTCCTCAGCATCCCAGATG	X	-	11239719-11239768	XqA1.1	PREDICTED: Mus musculus hypothetical LOC669520 (LOC669520), mRNA.					
Mus musculus	Riken	ILMN_202163	ILMN_202163	CHK	ri|3110043M12|ZX00071H22|AK014174|1627					AK014174	Chk		ILMN_1250008	001070717	S	1337	GACCTGAACCCTGAGAATGTGCTGAAAGGAGCCTCCAGTTTCTGGCTTCC										
Mus musculus	RefSeq	ILMN_211819	ILMN_211819	OLFR649	NM_147055.1	NM_147055.1		259057	22128842	NM_147055.1	Olfr649	NP_667266.1	ILMN_2619810	002510753	S	794	GCTTTGGGCGAAATGTCCCCCGCACTTTTCATATTATGTTTGCCAACCTG	7	-	111337876-111337925	7qE3	Mus musculus olfactory receptor 649 (Olfr649), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR31-7	MOR31-7
Mus musculus	RefSeq	ILMN_221034	ILMN_231640	FGF2	NM_008006.1	NM_008006.1		14173	7106314	NM_008006.1	Fgf2	NP_032032.1	ILMN_1239151	000830309	S	413	CGGGACCTGGACAGAAGGCCATACTGTTTCTTCCAATGTCTGCTAAGAGC	3	+	37287669-37287710:37295107-37295114	3qB	Mus musculus fibroblast growth factor 2 (Fgf2), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; The process that activates or increases the rate or extent of granule cell precursor proliferation [goid 21940] [evidence IDA]; Any process that activates or increases angiogenesis [goid 45766] [evidence IGI]; Any process that activates or increases angiogenesis [goid 45766] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IDA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	bFGF; Fgf-2; Fgfb	bFGF; Fgf-2; Fgfb
Mus musculus	RefSeq	ILMN_220761	ILMN_220761	KLK15	NM_174865.1	NM_174865.1		317652	33469044	NM_174865.1	Klk15	NP_777354.1	ILMN_2726478	006040682	S	386	GCCCTCTTATCGGTGAGGACTGCGTGGTGTCAGGCTGGGGTCTGTTATCA	7	+	51193905-51193954	7qB4	Mus musculus kallikrein related-peptidase 15 (Klk15), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MGC129160; MGC129345	MGC129160; MGC129345
Mus musculus	RefSeq	ILMN_208758	ILMN_247742	CRYGC	NM_001082573.1	NM_001082573.1		12966	128485690	NM_001082573.1	Crygc	NP_001076042.1	ILMN_1221737	003890431	S	307	AGATCACAAAGGTGTCATGATGGAGCTGAGCGAGGATTGCTCCTGCATCC	1	-	65118360-65118409	1qC2	Mus musculus crystallin, gamma C (Crygc), transcript variant 2, mRNA.		The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence TAS]	Cryg-5	Cryg-5
Mus musculus	RefSeq	ILMN_217948	ILMN_217948	PROSAPIP1	NM_197945.2	NM_197945.2		241638	38372902	NM_197945.2	Prosapip1	NP_922936.2	ILMN_2752737	000450608	S	68	AGAGCGGGACAGCTAGCGCCGGTGTCTGAGCCTCTGCGCCGGACTCTGAG	2	-	130468463-130468512	2qF1	Mus musculus ProSAPiP1 protein (Prosapip1), mRNA.					
Mus musculus	RefSeq	ILMN_217948	ILMN_217948	PROSAPIP1	NM_197945.2	NM_197945.2		241638	38372902	NM_197945.2	Prosapip1	NP_922936.2	ILMN_1243722	002030279	S	3976	GACCTTGATTGGCGGCTACTCTGGCAACCACTGCCCATTCTTCTAATCCC	2	-	130458744-130458793	2qF1	Mus musculus ProSAPiP1 protein (Prosapip1), mRNA.					
Mus musculus	RefSeq	ILMN_217948	ILMN_217948	PROSAPIP1	NM_197945.2	NM_197945.2		241638	38372902	NM_197945.2	Prosapip1	NP_922936.2	ILMN_2852893	001190528	S	4094	AAGAGATGGGGGGAGAGAAAAATATGAACAGCTTTGGAATGTCCAACTGC	2	-	130458626-130458675	2qF1	Mus musculus ProSAPiP1 protein (Prosapip1), mRNA.					
Mus musculus	RefSeq	ILMN_214702	ILMN_214702	C230078M14RIK	NM_172851.2	NM_172851.2		241175	128485745	NM_172851.2	C230078M14Rik	NP_766439.2	ILMN_2650925	002260739	S	5016	GGAGGTTTCAAGAAAGATATGATGAAGTAGCTGTTCCTGTACCTTGCCAC	1	+	102382415-102382464	1qE1.1	Mus musculus RIKEN cDNA C230078M14Rik gene (C230078M14Rik), mRNA.				Caspr5-2	Caspr5-2
Mus musculus	RefSeq	ILMN_221055	ILMN_221055	PIK3C3	NM_181414.5	NM_181414.5		225326	146198582	NM_181414.5	Pik3c3	NP_852079.2	ILMN_2730478	000840059	S	2844	GGGCTTTGTGTCCTTGCATGCCACTGCTTAAATCCAGCCCACAGGGTTTG				18qB1	Mus musculus phosphoinositide-3-kinase, class 3 (Pik3c3), mRNA.	A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]	5330434F23Rik; Vps34	5330434F23Rik; Vps34
Mus musculus	RefSeq	ILMN_208636	ILMN_208636	ASZ1	NM_023729.2	NM_023729.2		74068	30231214	NM_023729.2	Asz1	NP_076218.2	ILMN_2872745	004290161	S	1377	GGTCAGCAGTTACAGTGTGTGGATTCGGGCTGCTGCTTTTCATCGGCAAG	6	-	18025350-18025374:18025761-18025785	6qA2	Mus musculus ankyrin repeat, SAM and basic leucine zipper domain containing 1 (Asz1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence NAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence NAS]	4933400N19Rik; ORF3; Gasz	4933400N19Rik; ORF3; Gasz
Mus musculus	Riken	ILMN_203361	ILMN_203361	MMD	ri|9330110M07|PX00104M01|AK033889|1654					AK033889	Mmd		ILMN_1213422	000160719	S	1240	GAGGTCAGAAGGAAAAGCCTAGCATTTGCCCCAGCTTCGTGCTCAGTAGT						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_206194	ILMN_206194	B930089N03RIK	ri|B930089N03|PX00166J20|AK081116|2892					AK081116	B930089N03Rik		ILMN_1251434	005700386	S	2841	GAAGCTGCTGGGGGAGAGAGCTGGAAGTGAAAAAGCTGCTGCGTGAACCC										
Mus musculus	RefSeq	ILMN_211568	ILMN_211568	CD209A	NM_133238.4	NM_133238.4		170786	146149166	NM_133238.4	Cd209a	NP_573501.1	ILMN_2617210	004780739	S	845	AACCTTGACAAGATCTGTAAGACTTTATTCTGGCAGGTAGCTTGTCTCCT				8qA1.1	Mus musculus CD209a antigen (Cd209a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CD209; SIGN-R1; MGC130443; Dcsign; DC-SIGN1; DC-SIGN; CIRE; SIGNR5; CDSIGN	CD209; SIGN-R1; MGC130443; Dcsign; DC-SIGN1; DC-SIGN; CIRE; SIGNR5; CDSIGN
Mus musculus	RefSeq	ILMN_198340	ILMN_233136	ALPK2	XM_914598.2	XM_914598.2		225638	94404941	XM_914598.2	Alpk2	XP_919691.2	ILMN_1254484	001070369	S	412	TCCAAGGAAGAGGACAGCAGCTTCGAGGGAGGTGGGGCACTGCTTAATAA				18qE1	PREDICTED: Mus musculus alpha-kinase 2, transcript variant 1 (Alpk2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198349	ILMN_233136	ALPK2	XM_914598.2	XM_914598.2		225638	94404941	XM_914598.2	Alpk2	XP_919691.2	ILMN_1236742	000510193	S	4726	CAGAAAACAAGTGGCTGTCTCCTGGTCACGGACATGCAGGGTGTGGGAAT				18qE1	PREDICTED: Mus musculus alpha-kinase 2, transcript variant 1 (Alpk2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211448	ILMN_211448	2310061J03RIK	scl0000103.1_250	XM_148411.1			20892880	XM_148411.1	2310061J03Rik		ILMN_2701750	002370408	S	1138	AGCAATTGATTGCCACTGTCTGAGCCTCTGGGCCAAATACTGTCGCAGTA										
Mus musculus	MEEBO	ILMN_211448	ILMN_211448	2310061J03RIK	scl0000103.1_250	XM_148411.1			20892880	XM_148411.1	2310061J03Rik		ILMN_1221220	004570768	S	21	GAAGTGCGGCTGCTTTCGCGTCCCCAGCCCGCTCTGCTCCGCTTGGCTCG										
Mus musculus	Riken	ILMN_202680	ILMN_202680	IVD	ri|6720455E18|PX00059D05|AK020127|845					AK020127	Ivd		ILMN_1213518	003930056	S	560	CCTTCCTTGGGGTCTCAGTATGTATAGCTTTGGGTGGCCTGGAAGGCATT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 3-methylbutanoyl-CoA + ETF = 3-methylbut-2-enoyl-CoA + reduced ETF [goid 8470] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221617	ILMN_221617	FGD2	NM_013710.3	NM_013710.3		26382	141803019	NM_013710.3	Fgd2	NP_038738.2	ILMN_2737903	005900440	S	2283	TCCAGCAGACACAGGCCCTTTCCTTCAGGAAGATACCACCAAGTGTCCCA	17	+	29516141-29516190	17qA3.3	Mus musculus FYVE, RhoGEF and PH domain containing 2 (Fgd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	ZFYVE4	ZFYVE4
Mus musculus	MEEBO	ILMN_184737	ILMN_184737	4933406I18RIK	scl30787.6.1_18						4933406I18Rik		ILMN_2421160	001820193	S	8	AGACTGCTCTATTAAAATCATCTAGCATATTGTATCCACTTGTCTTCTAT										
Mus musculus	RefSeq	ILMN_209662	ILMN_209662	NACC2	NM_026495.3	NM_026495.3		67991	80861478	NM_026495.3	Nacc2	NP_080771.3	ILMN_2597978	004010528	S	2640	CCTGCAGTAGCTGTGGCTGGTCATCTGGGGGTGGGGGAAAGATGAGGTGT	2	-	25914736-25914785	2qA3	Mus musculus nucleus accumbens associated 2, BEN and BTB (POZ) domain containing (Nacc2), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	0610020I02Rik; AI448087; C030048H19Rik	0610020I02Rik; AI448087; C030048H19Rik
Mus musculus	RefSeq	ILMN_218042	ILMN_218042	PRAMEL1	NM_031377.1	NM_031377.1		83491	13878196	NM_031377.1	Pramel1	NP_113554.1	ILMN_1253686	005420035	S	2533	CTGTCCCTAGGCTACAGCACAACTGAACCCCACTGCTGAACCTCTTTAAT	4	+	142989802-142989851	4qE1	Mus musculus preferentially expressed antigen in melanoma-like 1 (Pramel1), mRNA.					
Mus musculus	RefSeq	ILMN_191553	ILMN_261804	KLC2	NM_008451.2	NM_008451.2		16594	133778982	NM_008451.2	Klc2	NP_032477.2	ILMN_1239133	003460369	S	2714	GGAGGGATTCGTTCCACTCCATCTTGCAAATGCCCAGACCCTCACACCAC	19	-	5107999-5108048	19qA	Mus musculus kinesin light chain 2 (Klc2), mRNA.	A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IPI]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IMP]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	8030455F02Rik; AW212649	8030455F02Rik; AW212649
Mus musculus	MEEBO	ILMN_208684	ILMN_208684	2610041B18RIK	scl31426.8.1_131	NM_027264.1			27229093	NM_027264.1	2610041B18Rik		ILMN_2588556	006420689	S	808	GTCCAAGATAGTTGTGTGAGCGCTTCCAGAAGATACTCTCTCTTCTCCAC										
Mus musculus	RefSeq	ILMN_185527	ILMN_185527	TSPYL1	NM_009433.2	NM_009433.2		22110	31543897	NM_009433.2	Tspyl1	NP_033459.1	ILMN_2427766	007400544	S	2562	AGTTATAAAAGTACTTTGTCAGCACTGTATATTTGTTGCCATTTTTATGC	10	+	34004610-34004659	10qB1	Mus musculus testis-specific protein, Y-encoded-like 1 (Tspyl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		Tspyl	Tspyl
Mus musculus	RefSeq	ILMN_185527	ILMN_185527	TSPYL1	NM_009433.2	NM_009433.2		22110	31543897	NM_009433.2	Tspyl1	NP_033459.1	ILMN_2801001	003520291	S	2282	TGAAACCATTTGGAATATTGTAAGACAACTCACTCTGTAGACCAGGCTGG	10	+	34004330-34004379	10qB1	Mus musculus testis-specific protein, Y-encoded-like 1 (Tspyl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		Tspyl	Tspyl
Mus musculus	RefSeq	ILMN_185527	ILMN_185527	TSPYL1	NM_009433.2	NM_009433.2		22110	31543897	NM_009433.2	Tspyl1	NP_033459.1	ILMN_2482766	007000603	S	1171	CAGGTTAATCTTTGCATTTGAAAATGCGGCCGGAACTGGTCCCTTCTCAC	10	+	34003219-34003226:34003227-34003268	10qB1	Mus musculus testis-specific protein, Y-encoded-like 1 (Tspyl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		Tspyl	Tspyl
Mus musculus	RefSeq	ILMN_213157	ILMN_243924	LRRC33	NM_146069.4	NM_146069.4		224109	146149103	NM_146069.4	Lrrc33	NP_666181.2	ILMN_2634235	007050743	S	3302	CCTTTGCTTCAGGTCATCAAGAGCCGCTGCCACTGGTCCTCCATATACTG				16qB2	Mus musculus leucine rich repeat containing 33 (Lrrc33), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC36838; Lrcc33; E430025L02Rik	MGC36838; Lrcc33; E430025L02Rik
Mus musculus	RefSeq	ILMN_213157	ILMN_243924	LRRC33	NM_146069.4	NM_146069.4		224109	146149103	NM_146069.4	Lrrc33	NP_666181.2	ILMN_2646630	001850075	S	203	CTCTCCCTGCCCGGCCTGGGGCCACATCTTTCAACTTCAGGCAAGTTAAT				16qB2	Mus musculus leucine rich repeat containing 33 (Lrrc33), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC36838; Lrcc33; E430025L02Rik	MGC36838; Lrcc33; E430025L02Rik
Mus musculus	RefSeq	ILMN_209304	ILMN_209304	GCNT2	NM_008105.2	NM_008105.2		14538	39995099	NM_008105.2	Gcnt2	NP_032131.2	ILMN_2726579	004250500	S	113	ACCACAGCGAGAGCTCCCAGGAAAAAGTAAGTCCGAGAAGGGATTGGCCA	13	+	40982647-40982696	13qA3.3	Mus musculus glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (Gcnt2), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R [goid 8109] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IDA]	IGnT; IGnTC; IGnTB; IGnTA; 5330430K10Rik	IGnT; IGnTC; IGnTB; IGnTA; 5330430K10Rik
Mus musculus	RefSeq	ILMN_219382	ILMN_219382	IIGP2	NM_019440.2	NM_019440.2		54396	31980893	NM_019440.2	Iigp2	NP_062313.2	ILMN_1259564	002230386	S	3166	TAAAAGCTCGCCTGAGGTTGTATGTGTTGGTCACAGGGTATCTCACCTGG	11	+	58038682-58038731		Mus musculus interferon inducible GTPase 2 (Iigp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISS]	AI481100; MGC102455; GTPI	AI481100; MGC102455; GTPI
Mus musculus	RefSeq	ILMN_200392	ILMN_200392	LOC386405	XM_359211.1	XM_359211.1			38081544	XM_359211.1	LOC386405		ILMN_2538597	002230082	S	54	TTCCTCTCTTACAGCTCGAGCGGCCTTCTCAGTCGAACCGTTCACGTTGC										
Mus musculus	RefSeq	ILMN_223753	ILMN_223753	ATP13A1	NM_133224.1	NM_133224.1		170759	18875381	NM_133224.1	Atp13a1	NP_573487.1	ILMN_2942669	007100292	S	3783	GCTAGTAGAAGAGTCCTGGCTAGCACCTTTGGTAAATAAATCGGCGTCTG	8	+	72331587-72331636	8qB3.3	Mus musculus ATPase type 13A1 (Atp13a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	catp; Atp13a; Cgi152	catp; Atp13a; Cgi152
Mus musculus	RefSeq	ILMN_223753	ILMN_223753	ATP13A1	NM_133224.1	NM_133224.1		170759	18875381	NM_133224.1	Atp13a1	NP_573487.1	ILMN_1250382	004540349	S	3282	CAAGGAGTTTGAGCCGAGCCTGGTCAACAGCACTGTGTACATCATGGCCA	8	+	72330920-72330969	8qB3.3	Mus musculus ATPase type 13A1 (Atp13a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	catp; Atp13a; Cgi152	catp; Atp13a; Cgi152
Mus musculus	RefSeq	ILMN_221673	ILMN_221673	OLFR1269	NM_146342.1	NM_146342.1		258339	22129617	NM_146342.1	Olfr1269	NP_666454.1	ILMN_2738845	002450142	S	592	GTTGTCAATGGGGGAACACTGTCGGTGATCAGCTTTGTGGTCCTCTTAGC	2	-	89959112-89959161	2qE1	Mus musculus olfactory receptor 1269 (Olfr1269), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR228-3	MOR228-3
Mus musculus	RefSeq	ILMN_210950	ILMN_210950	REPS1	NM_009048.1	NM_009048.1		19707	6677714	NM_009048.1	Reps1	NP_033074.1	ILMN_2985240	000360528	S	2205	GCAGCTCCGACCGTTTTCTCACCTCTGAGCCATCGCCGTGAACTGTGAAC	10	+	17844727-17844754:17844755-17844776	10qA3	Mus musculus RalBP1 associated Eps domain containing protein (Reps1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC91085; BB161292	MGC91085; BB161292
Mus musculus	RefSeq	ILMN_210950	ILMN_210950	REPS1	NM_009048.1	NM_009048.1		19707	6677714	NM_009048.1	Reps1	NP_033074.1	ILMN_1259410	001740131	S	2331	AAATTTTATGATTTGTTTTACCCTATATGTTCACCATTGTATTTAAGTAT	10	+	17844853-17844902	10qA3	Mus musculus RalBP1 associated Eps domain containing protein (Reps1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC91085; BB161292	MGC91085; BB161292
Mus musculus	RefSeq	ILMN_210950	ILMN_210950	REPS1	NM_009048.1	NM_009048.1		19707	6677714	NM_009048.1	Reps1	NP_033074.1	ILMN_1250054	004010608	S	1123	CGCTCTTCAAGCTCACAAACTCTGACCCAATTTGATTCTAACATTGCACC	10	+	17827495-17827544	10qA3	Mus musculus RalBP1 associated Eps domain containing protein (Reps1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC91085; BB161292	MGC91085; BB161292
Mus musculus	RefSeq	ILMN_211762	ILMN_211762	BAX	NM_007527.2	NM_007527.2		12028	31982498	NM_007527.2	Bax	NP_031553.1	ILMN_2907655	003780279	S	554	CTCCTACTTCGGGACCCCCACATGGCAGACAGTGACCATCTTTGTGGCTG	7	-	45329926-45329975	7qB4	Mus musculus Bcl2-associated X protein (Bax), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]; Any constituent part of cytosol, that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 44445] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of cell death by apoptosis of mammary epithelial cells during mammary gland involution [goid 60058] [evidence IMP]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IGI]; Any process that modulates the frequency, rate or extent of mammary gland epithelial cell proliferation [goid 33599] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IDA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IMP]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; The breakdown of the nucleus into small membrane-bounded compartments, or blebs, each of which contain compacted DNA [goid 30264] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IMP]; Programmed cell death that occurs in the developing retina [goid 46666] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IGI]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IGI]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [evidence IGI]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; Any process that modulates the frequency, rate or extent of nitrogen utilization [goid 6808] [evidence IGI]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IGI]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IMP]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IDA]; The process by which a protein is incorporated into a mitochondrial membrane as an early step in apoptosis [goid 1844] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IMP]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IDA]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The non-specific expansion of B cell populations within a whole or part of an organism to reach to a total number of B cells which will then remain stable over time in the absence of an external stimulus [goid 2358] [evidence IMP]; The non-specific expansion of T cell populations within a whole or part of an organism to reach to a total number of T cells which will then remain stable over time in the absence of an external stimulus [goid 1777] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IDA]; The non-specific expansion of T cell populations within a whole or part of an organism to reach to a total number of T cells which will then remain stable over time in the absence of an external stimulus [goid 1777] [evidence IMP]; Any process that activates or increases the deposition of coloring matter occurring during development [goid 48087] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the BH3 domain of a protein of the Bcl-2 family. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death [goid 51434] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IMP]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]		
Mus musculus	RefSeq	ILMN_193109	ILMN_241922	DOCK4	NM_172803.2	NM_172803.2		238130	62543570	NM_172803.2	Dock4	NP_766391.2	ILMN_2683540	000620491	S	6215	CCTGCCCCGTAAGGTGTCTCAGCTATAAGTCACTTTTCTATGTACCTGCG	12	+	41571225-41571252:41571253-41571274	12qB1	Mus musculus dedicator of cytokinesis 4 (Dock4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	C030023J22; 5330406C03; 6330411N01Rik; mKIAA0716; AF263288	C030023J22; 5330406C03; 6330411N01Rik; mKIAA0716; AF263288
Mus musculus	RefSeq	ILMN_241922	ILMN_241922	DOCK4	NM_172803.2	NM_172803.2		238130	62543570	NM_172803.2	Dock4	NP_766391.2	ILMN_2870329	000070441	S	7288	GCTGAGTGTCTCTGCTCGCTTGTCCTGTGGTCCTTTTTCTGGGGAAGAGG	12	+	41572298-41572347	12qB1	Mus musculus dedicator of cytokinesis 4 (Dock4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	C030023J22; 5330406C03; 6330411N01Rik; mKIAA0716; AF263288	C030023J22; 5330406C03; 6330411N01Rik; mKIAA0716; AF263288
Mus musculus	Riken	ILMN_203712	ILMN_203712	SPOCK1	ri|9630044M18|PX00116J08|AK036189|3130					AK036189	Spock1		ILMN_2559403	005900706	S	2513	CCACCCAGTCATTCGGTGCCTCCTACAGAACTATCGCATACGAGGCCCGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223363	ILMN_223363	CHES1	scl42161.10.1_175	XM_127089.2			28522188	XM_127089.2	Ches1		ILMN_1224125	004760544	S	2667	GTTAAGAAAAATGGTACAGATTTTTTTCCTCCTAAATAAATAATCTGACC										
Mus musculus	MEEBO	ILMN_215728	ILMN_215728	BC026585	scl00226527.1_138	XM_129546.2			38073527	XM_129546.2	BC026585		ILMN_1221257	002900661	S	1470	CACAGACATTCCTGCCTAAACTTAACCCCTTCTGTGAGCAAAAGGTACTG							The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_230652	ILMN_230652	2610305D13RIK	NM_145078.1	NM_145078.1		112422	21489950	NM_145078.1	2610305D13Rik	NP_659544.1	ILMN_2998406	001470608	S	1865	GTGGGGAAGCCATACGACTATAGTATTGTGTAACCCTTTCATGGAGACAG	4	-	146986393-146986442	4qE1	Mus musculus RIKEN cDNA 2610305D13 gene (2610305D13Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211135	ILMN_211135	C2	NM_013484.1	NM_013484.1		12263	7304936	NM_013484.1	C2	NP_038512.1	ILMN_2612895	004210470	S	2460	CCAGGATTGTGCCGGGACCTCTGTGCCACCTGTGAAGCAAGTCTCTCTCT	17	-	35003537-35003552:35003483-35003516	17qB1	Mus musculus complement component 2 (within H-2S) (C2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway [goid 6956] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209644	ILMN_209644	SPEER2	NM_173069.1	NM_173069.1		224318	33859794	NM_173069.1	Speer2	NP_775092.1	ILMN_2597788	002760102	S	263	CAGGTCATGTCCTCTCTGCACAAGTTACAGATGGAGAATATTGAGGCCCA	16	-	69741437-69741486	16qC2	Mus musculus spermatogenesis associated glutamate (E)-rich protein 2 (Speer2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SPEER-2	SPEER-2
Mus musculus	RefSeq	ILMN_209644	ILMN_209644	SPEER2	NM_173069.1	NM_173069.1		224318	33859794	NM_173069.1	Speer2	NP_775092.1	ILMN_2597786	006840280	S	265	GGTCATGTCCTCTCTGCACAAGTTACAGATGGAGAATATTGAGGCCCAAG	16	-	69741435-69741484	16qC2	Mus musculus spermatogenesis associated glutamate (E)-rich protein 2 (Speer2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SPEER-2	SPEER-2
Mus musculus	RefSeq	ILMN_249271	ILMN_249271	ATG9B	NM_001002897.3	NM_001002897.3		213948	146219844	NM_001002897.3	Atg9b	NP_001002897.2	ILMN_3160369	003140682	S	3551	GCCCCACTCTTGGAAGCTGAGGACTGCACCTGTTCACTCAAGCGCAAAAC				5qA3	Mus musculus ATG9 autophagy related 9 homolog B (S. cerevisiae) (Atg9b), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IDA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISA]		Apg9l2; Nos3as; Apg912; sONE; eONE; Apgdc2; Gm574	Apg9l2; Nos3as; Apg912; sONE; eONE; Apgdc2; Gm574
Mus musculus	RefSeq	ILMN_218852	ILMN_244646	BC027231	NM_145972.3	NM_145972.3		212547	146149280	NM_145972.3	BC027231	NP_666084.1	ILMN_2718550	002450300	S	2149	GCCTCACTGACCTCACTCCCTTTTAAAGTTTTATATTTTGTGCGAGGGTG				16qB4	Mus musculus cDNA sequence BC027231 (BC027231), mRNA.				MGC27931	MGC27931
Mus musculus	RefSeq	ILMN_218852	ILMN_244646	BC027231	NM_145972.3	NM_145972.3		212547	146149280	NM_145972.3	BC027231	NP_666084.1	ILMN_1227690	004780370	S	228	GCCAGACCTTGGATGCGGAAGTAGATGTGTTATGCTCAGTTCTCTACAGC				16qB4	Mus musculus cDNA sequence BC027231 (BC027231), mRNA.				MGC27931	MGC27931
Mus musculus	Riken	ILMN_206799	ILMN_206799	TOP3B	ri|A430060M24|PX00137C12|AK079765|788					AK079765	Top3b		ILMN_1228175	005390736	S	568	TCCTAGTTGTGACAGCTGCAGAGGCCAAGCCTTTGTGAAGTGTGGCTCAG						A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]	The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IMP]	Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA [goid 3916] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_247748	ILMN_247748	BC048644	NM_001033485.1	NM_001033485.1		407789	85702018	NM_001033485.1	BC048644	NP_001028657.1	ILMN_2966452	006650026	S	1965	CACCTGTGTATCCTGACAACGAGAACCACAGCCCCAACAATCAGGGGGTC	8	+	124804223-124804272	8qE1	Mus musculus cDNA sequence BC048644 (BC048644), mRNA.					
Mus musculus	RefSeq	ILMN_189543	ILMN_326598	9130004C02RIK	XM_001475643.1	XM_001475643.1		626123	149259850	XM_001475643.1	9130004C02Rik	XP_001475693.1	ILMN_2462232	002140477	S	3937	CCCTTCCAGAGGAGAGCAGGGATTCTTGGTAACATATATAGCCCCAACAC	9	-	25056032-25056081	9qA4	PREDICTED: Mus musculus RIKEN cDNA 9130004C02 gene (9130004C02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196733	ILMN_196733	HIST1H2AF	NM_175661.1	NM_175661.1		319173	30061378	NM_175661.1	Hist1h2af	NP_783592.1	ILMN_1219574	004250711	S	342	CGTGCTGCTGCCCAAGAAGACCGAGAGCCACCATAAGCCCAAGGGAAAGT	13	+	23626121-23626170	13qA3.1	Mus musculus histone cluster 1, H2af (Hist1h2af), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2a-221	H2a-221
Mus musculus	RefSeq	ILMN_196733	ILMN_196733	HIST1H2AF	NM_175661.1	NM_175661.1		319173	30061378	NM_175661.1	Hist1h2af	NP_783592.1	ILMN_1252136	005820653	S	246	CCACCTGCAGCTGGCCATCCGCAACGACGAGGAGCTCAACAAGCTGTTGG	13	+	23626025-23626074	13qA3.1	Mus musculus histone cluster 1, H2af (Hist1h2af), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2a-221	H2a-221
Mus musculus	RefSeq	ILMN_216756	ILMN_243358	BANK1	NM_001033350.2	NM_001033350.2		242248	110835718	NM_001033350.2	Bank1	NP_001028522.2	ILMN_2674940	004830082	S	2668	TTCTCTGAAAATCCATTCATTTTTACCACAACTTTTGCCACCAGAGCACC	3	-	135716857-135716906	3qG3	Mus musculus B-cell scaffold protein with ankyrin repeats 1 (Bank1), mRNA.		The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence ISO]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]	AI451642; BANK; A530094C12Rik; AVIEF	AI451642; BANK; A530094C12Rik; AVIEF
Mus musculus	RefSeq	ILMN_200920	ILMN_200920	LOC386561	XM_359403.1	XM_359403.1			38087066	XM_359403.1	LOC386561		ILMN_2540471	004260634	S	215	ATTTAAACCAAAGTTTGATCCCCCAACAAATACCAAATAATAGGGGGTCC										
Mus musculus	RefSeq	ILMN_192765	ILMN_227166	TBL1XR1	NM_030732.3	NM_030732.3		81004	130978338	NM_030732.3	Tbl1xr1	NP_109657.2	ILMN_2491125	005820180	S	7909	GACACCTGGTTCTGCGGTGCTTTTCTCTGCTGTACCAAGGCTCTGTCAAC	3	+	22115298-22115347	3qA3	Mus musculus transducin (beta)-like 1X-linked receptor 1 (Tbl1xr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		Ira1; 8030499H02Rik; A630076E03Rik; DC42; C230089I12Rik; TBLR1; AW539987; C21	Ira1; 8030499H02Rik; A630076E03Rik; DC42; C230089I12Rik; TBLR1; AW539987; C21
Mus musculus	RefSeq	ILMN_192765	ILMN_227166	TBL1XR1	NM_030732.3	NM_030732.3		81004	130978338	NM_030732.3	Tbl1xr1	NP_109657.2	ILMN_1244535	007650681	S	2532	GCATTCTTTGGAAGAGGTAGATGTTTGGTACATCTGATGGCTCCCAGAGC	3	+	22109921-22109970	3qA3	Mus musculus transducin (beta)-like 1X-linked receptor 1 (Tbl1xr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		Ira1; 8030499H02Rik; A630076E03Rik; DC42; C230089I12Rik; TBLR1; AW539987; C21	Ira1; 8030499H02Rik; A630076E03Rik; DC42; C230089I12Rik; TBLR1; AW539987; C21
Mus musculus	MEEBO	ILMN_193203	ILMN_193203	GCAP4	scl0014484.1_28						Gcap4		ILMN_1233819	000270113	S	20	AGCCAAACTTCTTAACCAGAACCAGACCCTTAATAAATCACAAAGAGAGC										
Mus musculus	RefSeq	ILMN_222329	ILMN_222329	CRYM	NM_016669.1	NM_016669.1		12971	7710011	NM_016669.1	Crym	NP_057878.1	ILMN_2913563	006280240	S	987	CTTGGTCATCTGGCAAGTGAGTTGAAGGAACCGTGCCTGAGTTGGCCATC	7	-	127330117-127330147:127330148-127330166	7qF2	Mus musculus crystallin, mu (Crym), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_205749	ILMN_205749	PPP1R1C	ri|A430024H12|PX00134H14|AK039877|1582					AK039877	Ppp1r1c		ILMN_1224734	003130722	S	1459	CAGCACTGAACTGGCAGAAACAGGTGCATCCCTGGGGTCTACTGGCAAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209226	ILMN_209226	KCNK13	NM_146037.1	NM_146037.1		217826	22122524	NM_146037.1	Kcnk13	NP_666149.1	ILMN_2593787	000060524	S	1909	GGGAAACTCCATCTTGTAACTAAAGCCCACAGCTTACTATGTCCTCTCTG	12	+	101300747-101300796	12qE	Mus musculus potassium channel, subfamily K, member 13 (Kcnk13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	Gm1570; F730021E22Rik; MGC31053; Gm1685; BB085247	Gm1570; F730021E22Rik; MGC31053; Gm1685; BB085247
Mus musculus	RefSeq	ILMN_192584	ILMN_234884	SOBP	NM_175407.3	NM_175407.3		109205	117938304	NM_175407.3	Sobp	NP_780616.4	ILMN_2489448	002480491	S	4911	CCGCCCCTCTGGGAACTCCTTTTCCTGCTGCGTCGGAATTGTCAGACAAA	10	-	42722325-42722374	10qB2	Mus musculus sine oculis-binding protein homolog (Drosophila) (Sobp), mRNA.		The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC67344; 2900009C16Rik; 5330439J01Rik	MGC67344; 2900009C16Rik; 5330439J01Rik
Mus musculus	RefSeq	ILMN_215551	ILMN_234884	SOBP	NM_175407.3	NM_175407.3		109205	117938304	NM_175407.3	Sobp	NP_780616.4	ILMN_2663348	004610646	S	939	GCGCTATTCCCTGAGTATGGGAAGCGAGGTGAAAAGCTTCTGCAGCGAGA	10	-	42847628-42847677	10qB2	Mus musculus sine oculis-binding protein homolog (Drosophila) (Sobp), mRNA.		The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC67344; 2900009C16Rik; 5330439J01Rik	MGC67344; 2900009C16Rik; 5330439J01Rik
Mus musculus	RefSeq	ILMN_206563	ILMN_234884	SOBP	NM_175407.3	NM_175407.3		109205	117938304	NM_175407.3	Sobp	NP_780616.4	ILMN_1226328	000620274	S	4270	CCAGAAGTCCTCTAGAACATGTGTACTGGCACTGAGTCGCTGAGACAGTC	10	-	42722966-42723015	10qB2	Mus musculus sine oculis-binding protein homolog (Drosophila) (Sobp), mRNA.		The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC67344; 2900009C16Rik; 5330439J01Rik	MGC67344; 2900009C16Rik; 5330439J01Rik
Mus musculus	RefSeq	ILMN_200978	ILMN_319612	LOC100048101	XM_001479525.1	XM_001479525.1		100048101	149258054	XM_001479525.1	LOC100048101	XP_001479575.1	ILMN_1221097	006840544	S	173	GCTGCTTGCAAGTATCAAATGATGGCCCGCACATTCTCGCTGGCTGTTCC					PREDICTED: Mus musculus hypothetical protein LOC100048101 (LOC100048101), mRNA.					
Mus musculus	RefSeq	ILMN_210132	ILMN_210132	RNF185	NM_145355.4	NM_145355.4		193670	146149125	NM_145355.4	Rnf185	NP_663330.2	ILMN_2602548	006900543	S	398	CAACATATGCCTGGACACAGCCAAGGATGCTGTCATCAGCCTGTGTGGCC				11qA1	Mus musculus ring finger protein 185 (Rnf185), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700022N24Rik; AL033296; MGC19394	1700022N24Rik; AL033296; MGC19394
Mus musculus	RefSeq	ILMN_210132	ILMN_210132	RNF185	NM_145355.4	NM_145355.4		193670	146149125	NM_145355.4	Rnf185	NP_663330.2	ILMN_2732291	007320402	S	139	GGCTCAGTGACTTCAACACCTGCCTGTTGTGCTGTATGTGTATCCTCCTC				11qA1	Mus musculus ring finger protein 185 (Rnf185), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700022N24Rik; AL033296; MGC19394	1700022N24Rik; AL033296; MGC19394
Mus musculus	RefSeq	ILMN_210132	ILMN_210132	RNF185	NM_145355.4	NM_145355.4		193670	146149125	NM_145355.4	Rnf185	NP_663330.2	ILMN_2643067	005820242	S	2756	GCCACCCACATGGACAAGGACAATGGGAACATGTAAGGCCGCATACCCTG				11qA1	Mus musculus ring finger protein 185 (Rnf185), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700022N24Rik; AL033296; MGC19394	1700022N24Rik; AL033296; MGC19394
Mus musculus	RefSeq	ILMN_192538	ILMN_192538	TTC8	NM_198311.1	NM_198311.1		76260	38146002	NM_198311.1	Ttc8	NP_938053.1	ILMN_3141738	003710088	A	1407	CACGCGCGCTCTTACAAACCGCATCGTCTTTGGCACCCCACATGTATGAG	12	+	100218013-100218062	12qE	Mus musculus tetratricopeptide repeat domain 8 (Ttc8), transcript variant 2, mRNA.	A 9+0 cilium that forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments [goid 32391] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BBS8; AV001447; 0610012F22Rik	BBS8; AV001447; 0610012F22Rik
Mus musculus	RefSeq	ILMN_209383	ILMN_321127	LOC100047300	XM_001478776.1	XM_001478776.1		100047300	149260446	XM_001478776.1	LOC100047300	XP_001478826.1	ILMN_2595311	000050114	S	1726	GCTTTCTCCAAGCTATATACAATTATTCAACTGTTGTGGAGGAAAGAAAG					PREDICTED: Mus musculus similar to cripto (LOC100047300), mRNA.					
Mus musculus	RefSeq	ILMN_194921	ILMN_244592	DNAJB9	NM_013760.4	NM_013760.4		27362	142365683	NM_013760.4	Dnajb9	NP_038788.2	ILMN_2510875	006020768	S	1748	CTGCACTTTTCCATGTTATACTCCATACGAGTATTAATCCTATGGATGCA	12	-	45306951-45307000	12qB3	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 9 (Dnajb9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	AA673481; AW556981; mDj7; AA408011; Mdg1; AA673251; ERdj4	AA673481; AW556981; mDj7; AA408011; Mdg1; AA673251; ERdj4
Mus musculus	RefSeq	ILMN_219103	ILMN_219103	B4GALT4	NM_019804.2	NM_019804.2		56375	142344191	NM_019804.2	B4galt4	NP_062778.1	ILMN_2704347	001690161	S	2000	GTAGGGTATGAATGAGCAGTTTATAAGCCACGTGATGACTGATAATGTCT	16	+	38768876-38768925	16qB4	Mus musculus UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4 (B4galt4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine [goid 3945] [evidence IEA]	B4galt-IV; beta4GalT-IV; 9130402O08Rik	B4galt-IV; beta4GalT-IV; 9130402O08Rik
Mus musculus	RefSeq	ILMN_209216	ILMN_209216	KLF4	NM_010637.1	NM_010637.1		16600	6754455	NM_010637.1	Klf4	NP_034767.1	ILMN_2999439	001740594	S	2548	GTGTCGGAGGAAGAGGAAGCGATTCAGGTACAGAACATGTTCTAACAGCC	4	-	55548674-55548723	4qB3	Mus musculus Kruppel-like factor 4 (gut) (Klf4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epidermal cell, any of the cells making up the epidermis [goid 9913] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The process by which the anatomical structures of the epidermis are generated and organized. Morphogenesis pertains to the creation of form. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 48730] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IDA]; The process occurring during the post-embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31077] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Gklf; EZF; Zie	Gklf; EZF; Zie
Mus musculus	RefSeq	ILMN_209216	ILMN_209216	KLF4	NM_010637.1	NM_010637.1		16600	6754455	NM_010637.1	Klf4	NP_034767.1	ILMN_1221264	002650092	S	1644	GGCCCAACTACCCTCCTTTCCTGCCAGACCAGATGCAGTCACAAGTCCCC	4	-	55551111-55551160	4qB3	Mus musculus Kruppel-like factor 4 (gut) (Klf4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epidermal cell, any of the cells making up the epidermis [goid 9913] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The process by which the anatomical structures of the epidermis are generated and organized. Morphogenesis pertains to the creation of form. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 48730] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IDA]; The process occurring during the post-embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31077] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Gklf; EZF; Zie	Gklf; EZF; Zie
Mus musculus	Riken	ILMN_202720	ILMN_202720	WEE1	ri|2210416C19|ZX00054M18|AK019069|251					AK019069	Wee1		ILMN_1250624	007380132	S	133	AGCCGGCTCCAGGGCTTTTAAAAAAAAAGGCCGCGGCGCTGCAGCCCTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221622	ILMN_221622	MRPS33	NM_010270.2	NM_010270.2		14548	58331151	NM_010270.2	Mrps33	NP_034400.1	ILMN_1214937	000990630	S	247	GACTGGTATCCAAATCACAACACGTATTTTGCGCTCATGGGCAACCTCCG	6	-	39755387-39755436	6qB1	Mus musculus mitochondrial ribosomal protein S33 (Mrps33), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gdap3; CGI-139; PTD003; AI841153; MRP-S33; MGC106490	Gdap3; CGI-139; PTD003; AI841153; MRP-S33; MGC106490
Mus musculus	MEEBO	ILMN_184987	ILMN_184987	2010321I05RIK	scl0076695.1_73						2010321I05Rik		ILMN_2423249	001740187	S	17	GCCTCGTTCCCCGCGCCTCACGCGCTAGTGCACTTTACACACATGAGAGA										
Mus musculus	RefSeq	ILMN_198042	ILMN_246251	LOC674912	XM_979860.1	XM_979860.1		674912	94404720	XM_979860.1	LOC674912	XP_984954.1	ILMN_1259641	004570445	S	2030	TAGAGCGAAGGAAACGGGAACGGGATGCTCAACGGGGGTGGTTTGAGTCG					PREDICTED: Mus musculus similar to melanoma antigen, transcript variant 1 (LOC674912), mRNA.					
Mus musculus	Riken	ILMN_203543	ILMN_203543	6430403C09RIK	ri|6430403C09|PX00103C13|AK032153|3768					AK032153	6430403C09Rik		ILMN_1235442	006660390	S	3320	CCGGGGCTCGGCTCCCAGCATTGTAAAACTGTGTGCGTGTGTGTTGTATG										
Mus musculus	RefSeq	ILMN_222508	ILMN_323674	LOC100048803	XM_001471617.1	XM_001471617.1		100048803	149252027	XM_001471617.1	LOC100048803	XP_001471667.1	ILMN_2777337	005130544	S	485	CCGGGAGCTCGTACATCTATGGCTATGTTGATGCTACGTATCGGGAAGGC	3|NT_114258.1	+	49163-49212		PREDICTED: Mus musculus hypothetical protein LOC100048803 (LOC100048803), mRNA.					
Mus musculus	RefSeq	ILMN_216102	ILMN_216102	B4GALT1	NM_022305.3	NM_022305.3		14595	118129977	NM_022305.3	B4galt1	NP_071641.1	ILMN_2667369	006840468	S	3467	TCAGATACGTGGTTCATTCTCAGGACCAAGGGAAACTGTCTTGCCTGTCC	4	-	40752094-40752143	4qA5	Mus musculus UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 (B4galt1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IMP]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IGI]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [evidence IMP]; Inflammation which comprises a rapid, short-lived, relatively uniform response to acute injury or antigenic challenge and is characterized by accumulations of fluid, plasma proteins, and granulocytic leukocytes. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response [goid 2526] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to a damaged tissue, following an injury [goid 60055] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation, contributing to the restoration of integrity to a damaged tissue following an injury [goid 60054] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis of mammary epithelial cells during mammary gland involution [goid 60058] [evidence IMP]; The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [evidence IDA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IDA]; The process whose specific outcome is the progression of the secondary sexual characteristics over time, from their formation to the mature structures. In humans, these include growth of axillary, chest, and pubic hair, voice changes, testicular/penile enlargement, breast development and menstrual periods. Development occurs in response to sex hormone secretion [goid 45136] [evidence IMP]; Any process that modulates the frequency, rate or extent of the movement of a cell [goid 51270] [evidence IDA]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IPI]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The glycosylation of a nitrogen atom of a free alpha amino terminal of a peptide [goid 6496] [evidence IMP]; The chemical reactions and pathways resulting in the formation of lactose, the disaccharide galactopyranosyl-glucose [goid 5989] [evidence IMP]; The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2064] [evidence IMP]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IPI]; Any process that modulates the frequency, rate or extent of the acrosome reaction [goid 60046] [evidence IMP]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [evidence IMP]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-galactose + D-glucose = UDP + lactose [goid 4461] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IDA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IMP]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine [goid 3945] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IDA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IDA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	4-GalT; GalT; Ggtb; B-1; Ggtb2; AA407245	4-GalT; GalT; Ggtb; B-1; Ggtb2; AA407245
Mus musculus	RefSeq	ILMN_200967	ILMN_200967	LOC384666	XM_357777.1	XM_357777.1			38087479	XM_357777.1	LOC384666		ILMN_1225393	002030180	S	714	GGGCCTATTTGGAAGTGTTCCTTATGCCCTCCCCGGAGATAGTGATGAGC										
Mus musculus	RefSeq	ILMN_200885	ILMN_200885	LOC381890	XM_355906.1	XM_355906.1			38086824	XM_355906.1	LOC381890		ILMN_2540345	002710022	S	233	GGGGTCACTTTGGGAACCTATATGATAAAAGGAAGAACCACCAGGGCAAG										
Mus musculus	MEEBO	ILMN_223368	ILMN_223368	1500034J20RIK	scl0066541.1_251	NM_028260.1			21312275	NM_028260.1	1500034J20Rik		ILMN_2763122	003610563	S	790	GTGTATTTCCCACCACATCGACAGCTCAGAAAGAAAGATTCATCACCTGC										
Mus musculus	MEEBO	ILMN_223368	ILMN_223368	1500034J20RIK	scl0066541.1_251	NM_028260.1			21312275	NM_028260.1	1500034J20Rik		ILMN_1227778	003840441	S	797	TCCCACCACATCGACAGCTCAGAAAGAAAGATTCATCACCTGCAGAGAAC										
Mus musculus	MEEBO	ILMN_189360	ILMN_189360	CHM	scl54667.16_146				9055183	NM_018818	Chm		ILMN_2740808	004390176	S	3788	CACCAGTAAAAGTGTTATCCTTTGTTATAATCTTAGAGTTAAGGCCTCCT						A heterodimeric enzyme complex, which in mammals is composed of an alpha and a beta subunit, and which associates with an accessory protein Rep (Rab escort protein). Catalyzes of the transfer of a geranyl-geranyl moiety from geranylgeranyl pyrophosphate to a Rab protein [goid 5968] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199635	ILMN_199635	LOC382814	XM_358731.1	XM_358731.1			38075406	XM_358731.1	LOC382814		ILMN_1259432	000730519	S	66	CGTGTCCGCAGGCCAATGTGGTCAAGGCAACTCCTCCATCAAGGTTTTCC										
Mus musculus	MEEBO	ILMN_193653	ILMN_193653	A630024B12RIK	scl29468.7_627				25092654	NM_153094	A630024B12Rik		ILMN_2499201	007570139	S	19	TATGTAGCTAAATATTGGATAATTGTAGTAGGAAATAAATGACAGCTTTT										
Mus musculus	MEEBO	ILMN_217202	ILMN_217202	ACACB	scl27396.4.1_31	XM_132282.2			38081868	XM_132282.2	Acacb		ILMN_2680256	004220022	S	794	TATGCGCTCCATCCGCCGCTGGGCCTACGAGATGTTCCGTAATGAACGTG								Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188595	ILMN_188595	XCL1	NM_008510.1	NM_008510.1		16963	6678711	NM_008510.1	Xcl1	NP_032536.1	ILMN_2948552	003850202	S	300	ATGGCTGAAACTGTTCCCACAGGAGCCCAGAGGTCCACCAGCACAGCGAT	1	-	166861931-166861980	1qH2.2	Mus musculus chemokine (C motif) ligand 1 (Xcl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	Lptn; SCM-1; SCM-1a; AI661682; LTN; Scyc1; ATAC	Lptn; SCM-1; SCM-1a; AI661682; LTN; Scyc1; ATAC
Mus musculus	RefSeq	ILMN_219799	ILMN_219799	SLC6A4	NM_010484.1	NM_010484.1		15567	7110638	NM_010484.1	Slc6a4	NP_034614.1	ILMN_2713714	001500037	S	2194	GTCACAGTCCTAAAGACTATGGTGCCCAGACTCTTGTGGGTTCCAACCAC	11	+	76845292-76845341	11qB5	Mus musculus solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 (Slc6a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of, within or between cells [goid 15844] [evidence ISO]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: serotonin(out) + Na+(out) = serotonin(in) + Na+(in) [goid 5335] [evidence IEA]; Catalysis of the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of the membrane to the other [goid 8504] [evidence ISO]	Htt; 5-HTT; AI323329; MGC124314; MGC124313; Sert	Htt; 5-HTT; AI323329; MGC124314; MGC124313; Sert
Mus musculus	RefSeq	ILMN_211455	ILMN_232910	9430008C03RIK	XM_001004952.1	XM_001004952.1		68108	94367389	XM_001004952.1	9430008C03Rik	XP_001004952.1	ILMN_1240972	006100470	S	401	GTTCTGTCCCCGTGACCATCATCTAGTGCCTGGAAAGACTAGTGACAAGA	2	-	158047282-158047331	2qH1	PREDICTED: Mus musculus RIKEN cDNA 9430008C03 gene (9430008C03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213264	ILMN_213264	SHCBP1	NM_011369.2	NM_011369.2		20419	141803091	NM_011369.2	Shcbp1	NP_035499.1	ILMN_2635367	003830397	S	1982	GAATGGCAAAGGGAGTTTTGGCACATTTCTTTACTAGCTACAATAATATC	8	-	4736080-4736093:4736094-4736129	8qA1.1	Mus musculus Shc SH2-domain binding protein 1 (Shcbp1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence IDA]	mPAL	mPAL
Mus musculus	RefSeq	ILMN_213264	ILMN_213264	SHCBP1	NM_011369.2	NM_011369.2		20419	141803091	NM_011369.2	Shcbp1	NP_035499.1	ILMN_2711112	004280047	S	322	GCTTCTTGGAAAAGGTCCTTGAACCATCTGGATGGTGGGCAGTCTGGCAC	8	-	4767933-4767982	8qA1.1	Mus musculus Shc SH2-domain binding protein 1 (Shcbp1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence IDA]	mPAL	mPAL
Mus musculus	RefSeq	ILMN_214559	ILMN_214559	BLOC1S1	NM_015740.2	NM_015740.2		14533	31980696	NM_015740.2	Bloc1s1	NP_056555.2	ILMN_1235757	004490358	S	257	GGACCATGAGGTGAAGACTCTACAGGTCCAGGCTGCCCAGTTTGCCAAGC	10	-	128323557-128323606	10qD3	Mus musculus biogenesis of lysosome-related organelles complex-1, subunit 1 (Bloc1s1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI839753; Gcn5l1; BLOS1	AI839753; Gcn5l1; BLOS1
Mus musculus	MEEBO	ILMN_185381	ILMN_185381	SCL0004040.1_123	scl0004040.1_123						scl0004040.1_123		ILMN_2426571	006760553	S	16	AAAGGCAAGTGAGCCAGCAAGCCAGCAAGCACTCTCGAGCGCACTCTCGT										
Mus musculus	RefSeq	ILMN_211385	ILMN_211385	BC024561	NM_153576.1	NM_153576.1		232983	24233520	NM_153576.1	BC024561	NP_705804.1	ILMN_2783414	006620176	S	312	GGCCACCAAGGAAGCAGTGTCCCTGTGATCACGTCAAGGGCAGGGAGAAA	7	-	25110915-25110964	7qA3	Mus musculus cDNA sequence BC024561 (BC024561), mRNA.				VCC-1; Vcc1; MGC37641	VCC-1; Vcc1; MGC37641
Mus musculus	RefSeq	ILMN_223083	ILMN_223083	PLA2G2E	NM_012044.2	NM_012044.2		26970	118129960	NM_012044.2	Pla2g2e	NP_036174.1	ILMN_1212812	005820768	S	509	GCTTTCGCCACAACCTGAACACTTACAACCGCAAGTATGCCCACTACCCC	4	+	138438387-138438436	4qD3	Mus musculus phospholipase A2, group IIE (Pla2g2e), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]		
Mus musculus	Riken	ILMN_203441	ILMN_203441	E130107G19RIK	ri|E130107G19|PX00091H22|AK053553|1294					AK053553	E130107G19Rik		ILMN_1242817	005870343	S	983	ATGGGGGAGATGTTGGGAGCATCCTTAACTGCCTTGTCAGCCATAAGTGC										
Mus musculus	RefSeq	ILMN_222365	ILMN_222365	SPEER5-PS1	NR_001582.1	NR_001582.1		70365	38093631	NR_001582.1	Speer5-ps1		ILMN_2748533	000780142	S	1311	TTTTGCTTTTTGTTTGAATTGTTGCAATGTTATTTAGAAGTTATACGTTC	10	+	43939270-43939319	10qB2	Mus musculus spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1 (Speer5-ps1), non-coding RNA.				SPEER-5; Speer5-ps; 1700007C10Rik	SPEER-5; Speer5-ps; 1700007C10Rik
Mus musculus	MEEBO	ILMN_211821	ILMN_211821	ALG3	scl0001901.1_31				22122364	NM_145939	Alg3		ILMN_2744459	003370671	S	1179	ATTGAGCTCTCCTGGAATACGTACCCATCCACGTCCTTCAGCTCTGCCGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 30] [evidence IEA]; Catalysis of the transfer of an alpha-D-mannosyl residue from dolichyl-phosphate D-mannose into membrane lipid-linked oligosaccharide [goid 4584] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210017	ILMN_210017	TMEM205	NM_178577.4	NM_178577.4		235043	119360290	NM_178577.4	Tmem205	NP_848692.2	ILMN_2601378	002100678	S	607	CTGCGGGACAAGGACCCCAAGTACAGTGCTCTACGCCGGAAGTTCTACCA	9	-	21725581-21725630	9qA3	Mus musculus transmembrane protein 205 (Tmem205), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			clone: 2-27; MGC18837	clone: 2-27; MGC18837
Mus musculus	MEEBO	ILMN_214117	ILMN_214117	ADAMTS4	scl0240913.9_121	NM_172845.1			27370273	NM_172845.1	Adamts4		ILMN_1230152	005720064	S	3527	ATGCTCTTTTTGGAGTCAGACAAATGTGGGTTATATTCTGGCCCCGCATC						A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208817	ILMN_208817	RABGGTB	NM_011231.1	NM_011231.1		19352	6755263	NM_011231.1	Rabggtb	NP_035361.1	ILMN_2589819	004880040	S	945	GCCTGTTAGCCCTGTCTTCTGTATGCCAGAAGAGGTGCTTCAGAGGGTGA	3	-	153570590-153570639	3qH3	Mus musculus RAB geranylgeranyl transferase, b subunit (Rabggtb), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223342	ILMN_223342	ABHD6	scl46642.13_541	NM_025341.2			31560263	NM_025341.2	Abhd6		ILMN_2762772	000130278	S	1796	CTACCTTTTTTGATGTAGAAATGTACATGGGGGGTGGGGTGGGGCATTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215346	ILMN_215346	DHX30	scl0003426.1_85				16740642	BC016202	Dhx30		ILMN_2658419	003710066	S	92	GACAAGGATGTTCGCGCGGCTTCTCATCAAGCTTTGTCCGCTCTGATGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223599	ILMN_223599	CHCHD8	NM_183270.2	NM_183270.2		68185	109948296	NM_183270.2	Chchd8	NP_899093.1	ILMN_2817151	005860139	S	750	ACGTGACCTTCCCGTTGCTGAGAGACTCAGGGGACAGGCAGAAATAAAGC	7	+	107688242-107688291	7qE3	Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 8 (Chchd8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	E2ig2; AW047259; AI115477; 5330414O08Rik; MGC106079	E2ig2; AW047259; AI115477; 5330414O08Rik; MGC106079
Mus musculus	RefSeq	ILMN_212240	ILMN_212240	MYF6	NM_008657.2	NM_008657.2		17878	118130704	NM_008657.2	Myf6	NP_032683.1	ILMN_1213941	004180176	S	887	CCACCTCAAGTGAAAGTCCTTCGCCTTGGGGCTTTTATTATGATACTTAT	10	-	106930227-106930276	10qD1	Mus musculus myogenic factor 6 (Myf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence TAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	herculin; MRF4	herculin; MRF4
Mus musculus	Riken	ILMN_201637	ILMN_201637	ELAC2	ri|1110017O07|R000016M04|AK003759|1112					AK003759	Elac2		ILMN_1253753	004880445	S	806	AGCCAGCGCACACAACTAGCCAGGAGGCAGTATGGAGTCAGCCTGCAGTA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215533	ILMN_215533	FMN	scl20471.26.1_268	NM_010230.1			6806910	NM_010230.1	Fmn		ILMN_2660698	000770092	S	4886	TCTAAGCCTTCCAGTATATACCCTTGTCATGAGAAAAGAGGTACATGGTG										
Mus musculus	RefSeq	ILMN_198941	ILMN_198941	LOC235444	XM_146935.2	XM_146935.2			38089948	XM_146935.2	LOC235444		ILMN_1212874	001940292	S	1014	GGTAGAGTGCAGCAAGGAAGAAGCCGCCTCTGACCAACAGAAAGAGCAGG										
Mus musculus	RefSeq	ILMN_213902	ILMN_213902	3110035E14RIK	NM_178399.4	NM_178399.4		76982	146198531	NM_178399.4	3110035E14Rik	NP_848486.1	ILMN_1252821	005340768	S	2652	CTCCGCAGGTGTTGGCACAAGCACGAGTTTGAACTGTTTGGGTATCAGGC				1qA2	Mus musculus RIKEN cDNA 3110035E14 gene (3110035E14Rik), mRNA.				AV164974; R75066; AI415019	AV164974; R75066; AI415019
Mus musculus	RefSeq	ILMN_209834	ILMN_209834	FMNL3	NM_011711.1	NM_011711.1		22379	38708162	NM_011711.1	Fmnl3	NP_035841.1	ILMN_2834837	000870138	S	4023	GTGGAAAAAGAAGGGCTAACACTTAACATGCAGAGTGGGTGGCAGTGGGA	15	-	99147990-99148039	15qF1	Mus musculus formin-like 3 (Fmnl3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FBP11; 2700073B04Rik; Wbp3; mKIAA2014	FBP11; 2700073B04Rik; Wbp3; mKIAA2014
Mus musculus	RefSeq	ILMN_209834	ILMN_209834	FMNL3	NM_011711.1	NM_011711.1		22379	38708162	NM_011711.1	Fmnl3	NP_035841.1	ILMN_2599657	003830347	S	4181	AGAGGCACTGTCTGTCCCAGCTCCAAGACTGCTAGAGGAAGGATGTGCCG	15	-	99147832-99147881	15qF1	Mus musculus formin-like 3 (Fmnl3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FBP11; 2700073B04Rik; Wbp3; mKIAA2014	FBP11; 2700073B04Rik; Wbp3; mKIAA2014
Mus musculus	RefSeq	ILMN_209834	ILMN_209834	FMNL3	NM_011711.1	NM_011711.1		22379	38708162	NM_011711.1	Fmnl3	NP_035841.1	ILMN_2599659	002970528	S	4185	GGCACTGTCTGTCCCAGCTCCAAGACTGCTAGAGGAAGGATGTGCCGCAA	15	-	99147828-99147877	15qF1	Mus musculus formin-like 3 (Fmnl3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FBP11; 2700073B04Rik; Wbp3; mKIAA2014	FBP11; 2700073B04Rik; Wbp3; mKIAA2014
Mus musculus	RefSeq	ILMN_217600	ILMN_245444	HSPG2	XM_978879.2	XM_978879.2		15530	149253149	XM_978879.2	Hspg2	XP_983973.2	ILMN_2685329	007400520	S	14033	ATAACCCTGCCCATCTGGGAGCCTGAGGACCTGACTAAGGGGTAAGCAGG	4	+	137126407-137126456	4qD3	PREDICTED: Mus musculus perlecan (heparan sulfate proteoglycan 2) (Hspg2), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_214540	ILMN_214540	YIPF6	NM_207633.2	NM_207633.2		77929	76253919	NM_207633.2	Yipf6	NP_997516.1	ILMN_3080410	006290575	I	4698	CCAGAGTATGCCCCCTCTTACTCACCTTTGCATCCTGGAACTGATTGGAC	X	+	96143863-96143912	XqC3	Mus musculus Yip1 domain family, member 6 (Yipf6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC59484; A430107J06Rik	MGC59484; A430107J06Rik
Mus musculus	RefSeq	ILMN_214589	ILMN_214540	YIPF6	NM_207633.2	NM_207633.2		77929	76253919	NM_207633.2	Yipf6	NP_997516.1	ILMN_2649610	005050706	S	796	TGGCGGAGGCCCAGAATTCGCAGAAGTATTTGTTATCATCTGGTTTGGAG	X	+	96138153-96138202	XqC3	Mus musculus Yip1 domain family, member 6 (Yipf6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC59484; A430107J06Rik	MGC59484; A430107J06Rik
Mus musculus	RefSeq	ILMN_214540	ILMN_214540	YIPF6	NM_207633.2	NM_207633.2		77929	76253919	NM_207633.2	Yipf6	NP_997516.1	ILMN_1243810	002750050	S	3045	CACAAGCCGTAAGGGTTTTGGAGGGTTAAACACGTTGGATATAAGGCAGC	X	+	96142210-96142259	XqC3	Mus musculus Yip1 domain family, member 6 (Yipf6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC59484; A430107J06Rik	MGC59484; A430107J06Rik
Mus musculus	RefSeq	ILMN_214540	ILMN_214540	YIPF6	NM_207633.2	NM_207633.2		77929	76253919	NM_207633.2	Yipf6	NP_997516.1	ILMN_3159866	002650689	A	4809	GGCAGACTTAAAAAGACAGGTTTACGGCCCTTACTCCTCATTGACCCCCC	X	+	96143974-96144023	XqC3	Mus musculus Yip1 domain family, member 6 (Yipf6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC59484; A430107J06Rik	MGC59484; A430107J06Rik
Mus musculus	Riken	ILMN_203210	ILMN_203210	B230209C24RIK	ri|B230209C24|PX00069H21|AK045534|1565					AK045534	B230209C24Rik		ILMN_2555553	006980735	S	1275	GCCTAGGTTGCATAAGACCTTGTCTCAGAAGGGGGAAAAATTGGATACTG										
Mus musculus	Riken	ILMN_204357	ILMN_204357	SDHA	ri|C430011O11|PX00078G10|AK049441|1739					AK049441	Sdha		ILMN_2564352	003830259	S	998	GTATGGAAATAGGCTTATCAGCACTGCCTACTACAGCCCCAAGTCTGGCC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: succinate + quinone = fumarate + quinol [goid 8177] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210169	ILMN_210169	CNTF	NM_170786.2	NM_170786.2		12803	90669424	NM_170786.2	Cntf	NP_740756.1	ILMN_2602921	006020450	S	155	CTGTGGGAGTCACATTTCTTATTTGGACTAGTGAAGACAGAAGCAAACCA	19	-	12839918-12839967	19qA	Mus musculus ciliary neurotrophic factor (Cntf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat3 protein [goid 42517] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of photoreceptor cell differentiation [goid 46533] [evidence IDA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IDA]; The process by which the anatomical structures of muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 48644] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	AI429687; MGC41235	AI429687; MGC41235
Mus musculus	RefSeq	ILMN_212314	ILMN_212314	PRKAR1B	NM_008923.2	NM_008923.2		19085	31543508	NM_008923.2	Prkar1b	NP_032949.2	ILMN_1235354	001410537	S	2207	CCCTTACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCC	5	-	139493572-139493621	5qG2	Mus musculus protein kinase, cAMP dependent regulatory, type I beta (Prkar1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence ISS]	RIbeta; AI385716	RIbeta; AI385716
Mus musculus	Riken	ILMN_203821	ILMN_203821	A230057M07RIK	ri|A230057M07|PX00128B17|AK038731|3080					AK038731	A230057M07Rik		ILMN_1228288	002970327	S	2925	GGCAAGAGGTACTTAGGGAAACCTCCAGTCTTTTCCATGGGTAGGGTCCG										
Mus musculus	RefSeq	ILMN_185566	ILMN_312756	ZCCHC2	XM_001478125.1	XM_001478125.1		227449	149234247	XM_001478125.1	Zcchc2	XP_001478175.1	ILMN_2428117	005130167	S	4138	CGGAAAACATTGATGTGTGCTTTTTTACACTGACTACTTGCTGTGTGCAA	1	+	107928993-107929042	1qE2.1	PREDICTED: Mus musculus zinc finger, CCHC domain containing 2 (Zcchc2), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210347	ILMN_210347	GJB2	NM_008125.2	NM_008125.2		14619	31542892	NM_008125.2	Gjb2	NP_032151.1	ILMN_1227148	006280382	S	1945	GTGGTTTTCAGAGAACCAATGAAACTTCTAGACTCCCAATCCTGTTGATT	14	-	57717811-57717860	14qC3	Mus musculus gap junction protein, beta 2 (Gjb2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gjb-2; Cx26; AI325222; Cnx26	Gjb-2; Cx26; AI325222; Cnx26
Mus musculus	RefSeq	ILMN_210347	ILMN_210347	GJB2	NM_008125.2	NM_008125.2		14619	31542892	NM_008125.2	Gjb2	NP_032151.1	ILMN_2999627	002230730	S	2164	TCCTACAAGATGACAGTCAACAAATCCAACAGGGGACACTTCTTCCTGCC	14	-	57717592-57717641	14qC3	Mus musculus gap junction protein, beta 2 (Gjb2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gjb-2; Cx26; AI325222; Cnx26	Gjb-2; Cx26; AI325222; Cnx26
Mus musculus	RefSeq	ILMN_210347	ILMN_210347	GJB2	NM_008125.2	NM_008125.2		14619	31542892	NM_008125.2	Gjb2	NP_032151.1	ILMN_2604713	001230047	S	489	GCCAGCCCTCCTGGTAGCTATGCATGTGGCCTACCGGAGACATGAAAAGA	14	-	57719267-57719316	14qC3	Mus musculus gap junction protein, beta 2 (Gjb2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gjb-2; Cx26; AI325222; Cnx26	Gjb-2; Cx26; AI325222; Cnx26
Mus musculus	RefSeq	ILMN_221320	ILMN_221320	9930021J17RIK	NM_172682.2	NM_172682.2		229488	141802502	NM_172682.2	9930021J17Rik	NP_766270.1	ILMN_1216660	001740180	S	3113	GGAGCACAACCAAAACTCAAGACAGCCTTAATTCAGTAAGATTTGCACAA	3	-	85464196-85464245	3qF1	Mus musculus RIKEN cDNA 9930021J17 gene (9930021J17Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_189027	ILMN_189027	ADRB1	scl52995.1_5				6680665	NM_007419	Adrb1		ILMN_2457727	004810079	S	8	GGTTGGAAGGCCATTTTGCACAGTGTTAGGCATTGTAAAATTCATAGAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]	Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria [goid 50873] [evidence IGI]; Any homeostatic process by which an organism produces heat, thereby raising its internal temperature [goid 31649] [evidence IGI]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IDA]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IMP]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IMP]; The process that results in increased metabolic rate in tissues of an organism. It is triggered by the detection of dietary excess. This process is achieved via signalling in the sympathetic nervous system [goid 2024] [evidence IGI]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IMP]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IGI]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IMP]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4940] [evidence IMP];  [goid 4940] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212496	ILMN_212496	PWP2	NM_029546.2	NM_029546.2		110816	141802993	NM_029546.2	Pwp2	NP_083822.1	ILMN_1230883	002260435	S	1620	CTTGGGACAAGACAGTGCGTCTGTGGGACATGTTCGACAGTTGGAGAACC	10	-	77640522-77640571	10qC1	Mus musculus PWP2 periodic tryptophan protein homolog (yeast) (Pwp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			6530411D08Rik; Pwp2h; MGC117973; wdp103	6530411D08Rik; Pwp2h; MGC117973; wdp103
Mus musculus	RefSeq	ILMN_223079	ILMN_227853	RORB	NM_001043354.1	NM_001043354.1		225998	112821699	NM_001043354.1	Rorb	NP_001036819.1	ILMN_1252870	000010132	S	1979	GGAGCTCTTTAATCCTGACTGTGCTGCGGTCTGCAAATGAAGGGGACGAG	19	-	19012359-19012369:19012370-19012408	19qB	Mus musculus RAR-related orphan receptor beta (Rorb), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	MGC38728; Nr1f2; RZR-beta; RZRB	MGC38728; Nr1f2; RZR-beta; RZRB
Mus musculus	RefSeq	ILMN_227853	ILMN_227853	RORB	NM_001043354.1	NM_001043354.1		225998	112821699	NM_001043354.1	Rorb	NP_001036819.1	ILMN_3137520	003440717	A	1874	GATACCAACTATCACGGCAGTCTGCAACTTGCATGGGGAGAAGCTGCAGG	19	-	19012464-19012513	19qB	Mus musculus RAR-related orphan receptor beta (Rorb), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	MGC38728; Nr1f2; RZR-beta; RZRB	MGC38728; Nr1f2; RZR-beta; RZRB
Mus musculus	RefSeq	ILMN_203696	ILMN_238889	TCFAP2B	NM_001025305.1	NM_001025305.1		21419	70609884	NM_001025305.1	Tcfap2b	NP_001020476.1	ILMN_1245527	002510576	S	340	CCAGATGTTAGTCCACACCTATTCATCCATGGACCGGCACGATGGCGTCC	1	+	19202474-19202477:19202478-19202504:19204032-19204050	1qA3	Mus musculus transcription factor AP-2 beta (Tcfap2b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E130018K07Rik; AI606113; AP-2(beta)	E130018K07Rik; AI606113; AP-2(beta)
Mus musculus	RefSeq	ILMN_217594	ILMN_238889	TCFAP2B	NM_001025305.1	NM_001025305.1		21419	70609884	NM_001025305.1	Tcfap2b	NP_001020476.1	ILMN_1223731	001400112	S	1550	CTCACCGAGGCGCTCAAAGGCATGGACAAGATGTTCTTGAACAACACCAC	1	+	19224309-19224358	1qA3	Mus musculus transcription factor AP-2 beta (Tcfap2b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E130018K07Rik; AI606113; AP-2(beta)	E130018K07Rik; AI606113; AP-2(beta)
Mus musculus	RefSeq	ILMN_238889	ILMN_238889	TCFAP2B	NM_001025305.1	NM_001025305.1		21419	70609884	NM_001025305.1	Tcfap2b	NP_001020476.1	ILMN_3072487	007160136	I	222	GGCTTGTCCTGGAAACATCTCAAGCCTAGCTCCTGTGTCCAGCTTGCTTC	1	+	19202356-19202405	1qA3	Mus musculus transcription factor AP-2 beta (Tcfap2b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E130018K07Rik; AI606113; AP-2(beta)	E130018K07Rik; AI606113; AP-2(beta)
Mus musculus	RefSeq	ILMN_193959	ILMN_238889	TCFAP2B	NM_001025305.1	NM_001025305.1		21419	70609884	NM_001025305.1	Tcfap2b	NP_001020476.1	ILMN_2502039	006220068	S	5817	GCTGTTATGGTATTGGGTAGAAATTGGTTTATTGTCCAGTGTTAATCTGA	1	+	19228576-19228625	1qA3	Mus musculus transcription factor AP-2 beta (Tcfap2b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E130018K07Rik; AI606113; AP-2(beta)	E130018K07Rik; AI606113; AP-2(beta)
Mus musculus	RefSeq	ILMN_238889	ILMN_238889	TCFAP2B	NM_001025305.1	NM_001025305.1		21419	70609884	NM_001025305.1	Tcfap2b	NP_001020476.1	ILMN_3151298	002760451	A	5580	CCCAGTCAAGAGGTAACAACTGCCTCTTCTCGAGGGCACTCTGGAGGGTA	1	+	19228339-19228388	1qA3	Mus musculus transcription factor AP-2 beta (Tcfap2b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E130018K07Rik; AI606113; AP-2(beta)	E130018K07Rik; AI606113; AP-2(beta)
Mus musculus	MEEBO	ILMN_213721	ILMN_213721	GYK	scl014933.1_35	NM_212444.1			46909578	NM_212444.1	Gyk		ILMN_2742057	004780450	S	1764	AGTCTGCCTTTGGGCTTTTTTATAGTGAGTAGCATGGTAATGTTAATCGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 6072] [evidence IEA]; The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + glycerol = ADP + glycerol 3-phosphate [goid 4370] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214241	ILMN_214241	SPINT2	NM_011464.2	NM_011464.2		20733	127138977	NM_011464.2	Spint2	NP_035594.1	ILMN_2645845	001170072	S	565	GGAGGCTGTGAAGGCAATGGCAATAACTACCAGAGCAAGGAGGAGTGTCT	7	-	30048636-30048685	7qB1	Mus musculus serine protease inhibitor, Kunitz type 2 (Spint2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	AL024025; HAI-2; C76321	AL024025; HAI-2; C76321
Mus musculus	RefSeq	ILMN_214241	ILMN_214241	SPINT2	NM_011464.2	NM_011464.2		20733	127138977	NM_011464.2	Spint2	NP_035594.1	ILMN_2663338	001260301	S	1394	AAAAAATCAGGATTCTGAAAGAATGTGTTTAATAAAGTGGGCCTTTTAAA	7	-	30041365-30041414	7qB1	Mus musculus serine protease inhibitor, Kunitz type 2 (Spint2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	AL024025; HAI-2; C76321	AL024025; HAI-2; C76321
Mus musculus	MEEBO	ILMN_189731	ILMN_189731	4932409F11RIK	scl0109012.1_69				21313037	NM_029404	4932409F11Rik		ILMN_2774863	002970112	S	3266	TTTAGAAATGATGTTTAATAAATCTATAGTCAATTAACTGGGGACAAAGA										
Mus musculus	MEEBO	ILMN_189731	ILMN_189731	4932409F11RIK	scl0109012.1_69				21313037	NM_029404	4932409F11Rik		ILMN_2463882	006900647	S	3	CCAGTACTCAGCAACATTGTAGCAAAAAGACTGTTGGGAGTAAAGTCACA										
Mus musculus	RefSeq	ILMN_208788	ILMN_208788	TSPAN17	NM_028841.1	NM_028841.1		74257	21312677	NM_028841.1	Tspan17	NP_083117.1	ILMN_2817714	004880026	S	1359	GACTTTGAGCCTGCCTGGAGCTTGTCTTGGCCTCAGTGTCACAGCCTCTG	13	+	54806256-54806305	13qB1	Mus musculus tetraspanin 17 (Tspan17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Tm4sf17; 2210021G21Rik; AI047581; Fbxo23	Tm4sf17; 2210021G21Rik; AI047581; Fbxo23
Mus musculus	RefSeq	ILMN_208788	ILMN_208788	TSPAN17	NM_028841.1	NM_028841.1		74257	21312677	NM_028841.1	Tspan17	NP_083117.1	ILMN_2817717	002140196	S	1079	CCTTGGTGCTCATTACCCACTGAGGAAACCATTGGGGACTAGACTGGGGC	13	+	54805976-54806025	13qB1	Mus musculus tetraspanin 17 (Tspan17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Tm4sf17; 2210021G21Rik; AI047581; Fbxo23	Tm4sf17; 2210021G21Rik; AI047581; Fbxo23
Mus musculus	RefSeq	ILMN_212476	ILMN_212476	GABRA4	NM_010251.2	NM_010251.2		14397	85861216	NM_010251.2	Gabra4	NP_034381.1	ILMN_1237870	004490601	S	2137	GAAATCAGAAAGTCTAATGTAATTTTGTTGCTATAGTAATTTCATAACAA	5	-	71962909-71962937:71962938-71962958	5qC3.2	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4 (Gabra4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	Gabra-4	Gabra-4
Mus musculus	RefSeq	ILMN_200972	ILMN_200972	LOC384681	XM_357787.1	XM_357787.1			38087516	XM_357787.1	LOC384681		ILMN_1257289	001660519	S	334	TATGCCCAGCACAACACGCTGCTGTGGCCTCAAGTGGACACCTCAAACAG										
Mus musculus	RefSeq	ILMN_201141	ILMN_201095	EG384770	XM_357856.4	XM_357856.4		384770	149258331	XM_357856.4	EG384770	XP_357856.1	ILMN_1222255	004760475	S	241	CCCCAGGGCTATTACTTCTGCACTTCCTCCATCACTGGGGATCTCTCTGC	8	-	4016715-4016764	8qA1.1	PREDICTED: Mus musculus predicted gene, EG384770 (EG384770), mRNA.					
Mus musculus	RefSeq	ILMN_201095	ILMN_201095	EG384770	XM_357856.4	XM_357856.4		384770	149258331	XM_357856.4	EG384770	XP_357856.1	ILMN_2541061	006520292	S	181	ATGGATATTGATGGCAAACATGAGTGGAGGGACTGCATTGAGATGCCCGG	8	-	4016775-4016824	8qA1.1	PREDICTED: Mus musculus predicted gene, EG384770 (EG384770), mRNA.					
Mus musculus	RefSeq	ILMN_258002	ILMN_258002	RANGAP1	NM_011241.3	NM_011241.3		19387	31982567	NM_011241.3	Rangap1	NP_035371.3	ILMN_2868997	002070253	S	2841	TAGGGATGGAGCCGGGTAAGAGATGCTCTGTGACTTCCCGAATGGGCTGC	15	-	81534771-81534820	15qE1	Mus musculus RAN GTPase activating protein 1 (Rangap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Ran family [goid 5098] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1835; Fug1; C79654	mKIAA1835; Fug1; C79654
Mus musculus	RefSeq	ILMN_212482	ILMN_212482	DAXX	NM_007829.3	NM_007829.3		13163	112181184	NM_007829.3	Daxx	NP_031855.3	ILMN_2626939	004150369	S	2289	GGCCACACAGTGCGACCCGGAGGAGATCATCGTGCTTTCAGACTCTGATT	17	+	34048969-34049018	17qB1	Mus musculus Fas death domain-associated protein (Daxx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	MGC150289	MGC150289
Mus musculus	RefSeq	ILMN_193861	ILMN_212366	RAB3B	NM_023537.5	NM_023537.5		69908	118130330	NM_023537.5	Rab3b	NP_076026.1	ILMN_1259079	003180576	S	3147	GGACCTGACAGCTTGGGCAGGATTCCAAGCGACGGGATCACACTTATTGG	4	+	108615756-108615805	4qC7	Mus musculus RAB3B, member RAS oncogene family (Rab3b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]; The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine [goid 18125] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2610528C18Rik	2610528C18Rik
Mus musculus	RefSeq	ILMN_213497	ILMN_213497	IRGM1	NM_008326.1	NM_008326.1		15944	6680350	NM_008326.1	Irgm1	NP_032352.1	ILMN_2711172	007380221	S	273	GAGATAAGGCATTCGAAGGAACCAACTCAGATTCACAGACAGAGGACCTG	11	-	48682213-48682262	11qB1.2	Mus musculus immunity-related GTPase family M member 1 (Irgm1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Ifi1; LRG-47; Iipg3; Iigp3	Ifi1; LRG-47; Iipg3; Iigp3
Mus musculus	RefSeq	ILMN_213497	ILMN_213497	IRGM1	NM_008326.1	NM_008326.1		15944	6680350	NM_008326.1	Irgm1	NP_032352.1	ILMN_1234539	005820608	S	1826	CATCTCCCCTGTCTCGATTCTAATGCATTGTTCCACTGAGGGACAGGGAC	11	-	48679102-48679151	11qB1.2	Mus musculus immunity-related GTPase family M member 1 (Irgm1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Ifi1; LRG-47; Iipg3; Iigp3	Ifi1; LRG-47; Iipg3; Iigp3
Mus musculus	RefSeq	ILMN_213497	ILMN_213497	IRGM1	NM_008326.1	NM_008326.1		15944	6680350	NM_008326.1	Irgm1	NP_032352.1	ILMN_2804037	007550324	S	2014	CGTGATGGCTCACAACCATCCGTAGTGAGATCTGATGCCCTCTTCTGAGA	11	-	48678914-48678963	11qB1.2	Mus musculus immunity-related GTPase family M member 1 (Irgm1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Ifi1; LRG-47; Iipg3; Iigp3	Ifi1; LRG-47; Iipg3; Iigp3
Mus musculus	MEEBO	ILMN_218788	ILMN_218788	2610028E06RIK	scl23827.10_209				51709455	XM_489059	2610028E06Rik		ILMN_2700214	003420681	S	2939	GGCCGTGGCTCATCGTGGAGATTATTCTGTGTTATGAACTGCTGCGGTGT										
Mus musculus	RefSeq	ILMN_185102	ILMN_185102	UBE2E3	NM_009454.2	NM_009454.2		22193	31981935	NM_009454.2	Ube2e3	NP_033480.1	ILMN_1225627	007320152	S	4	CATGGTGTACTCTCCTCCAATACCTCCCAGATCTACCCTACTTTCCCTCC	2	+	78709207-78709256	2qC3	Mus musculus ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast) (Ube2e3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ubce4; ubcM2	Ubce4; ubcM2
Mus musculus	RefSeq	ILMN_185102	ILMN_185102	UBE2E3	NM_009454.2	NM_009454.2		22193	31981935	NM_009454.2	Ube2e3	NP_033480.1	ILMN_2512042	002940209	S	4	GACAGGCAAAGGTCGGATGATGAGAGCCCTAGCACCAGCAGTGGCAGTTC	2	+	78709207-78709256	2qC3	Mus musculus ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast) (Ube2e3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ubce4; ubcM2	Ubce4; ubcM2
Mus musculus	RefSeq	ILMN_213203	ILMN_213203	KLHDC2	NM_027117.1	NM_027117.1		69554	21312319	NM_027117.1	Klhdc2	NP_081393.1	ILMN_2845272	005130301	S	1474	TGGTCCACTTGCATGGAGAACAGCCCCGTACTTGTCACACAGTGTCATCC	12	+	70228907-70228956	12qC2	Mus musculus kelch domain containing 2 (Klhdc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D12Ertd522e; LCP; HCLP-1; 2310022K15Rik	D12Ertd522e; LCP; HCLP-1; 2310022K15Rik
Mus musculus	MEEBO	ILMN_220922	ILMN_220922	CTS7	scl43855.6.1_3	NM_019539.2			42476043	NM_019539.2	Cts7		ILMN_2728672	000630753	S	1018	AGTGCAGAAAGGATACTCTCGACCATGGTTTACTATTGGTTGGCTATGGC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]		
Mus musculus	RefSeq	ILMN_221081	ILMN_221081	TMUB1	NM_022418.2	NM_022418.2		64295	142379909	NM_022418.2	Tmub1	NP_071863.1	ILMN_2730829	006840609	S	719	CAGATCCAGTACCGGCCCTTCTTTCCCCTGACCGCTACCCTGGGTCTGGC	5	-	23951791-23951840	5qA3	Mus musculus transmembrane and ubiquitin-like domain containing 1 (Tmub1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		AB030183; Hops; 2010004O20Rik	AB030183; Hops; 2010004O20Rik
Mus musculus	RefSeq	ILMN_214098	ILMN_212350	KCND2	NM_019697.3	NM_019697.3		16508	51036625	NM_019697.3	Kcnd2	NP_062671.1	ILMN_2644229	007160176	S	4181	GACTTGGCTTATTTGGGTTGATACTTATTATTCCTGCTTTGGTTTGTCGT	6	+	21679440-21679489	6qA2-qA3.1	Mus musculus potassium voltage-gated channel, Shal-related family, member 2 (Kcnd2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Kv4.2; R75121; AW555701; AI839615; mKIAA1044	Kv4.2; R75121; AW555701; AI839615; mKIAA1044
Mus musculus	RefSeq	ILMN_212350	ILMN_212350	KCND2	NM_019697.3	NM_019697.3		16508	51036625	NM_019697.3	Kcnd2	NP_062671.1	ILMN_2625435	004760551	S	1977	CAATAATAAGCATCCCAACACCTCCAGTAACCACCCCAGAAGGCGACGAC	6	+	21677236-21677285	6qA2-qA3.1	Mus musculus potassium voltage-gated channel, Shal-related family, member 2 (Kcnd2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Kv4.2; R75121; AW555701; AI839615; mKIAA1044	Kv4.2; R75121; AW555701; AI839615; mKIAA1044
Mus musculus	RefSeq	ILMN_223113	ILMN_223113	SBDS	NM_023248.1	NM_023248.1		66711	23956137	NM_023248.1	Sbds	NP_075737.1	ILMN_1245650	005490369	S	932	AGCAGCTCGTTCTGTGACCTGCCAAACGCCCTGCTCACGCGACGTGCCAC	5	-	130722099-130722148	5qG1.3	Mus musculus Shwachman-Bodian-Diamond syndrome homolog (human) (Sbds), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI836084; CGI-97; SDS; 4733401P19Rik	AI836084; CGI-97; SDS; 4733401P19Rik
Mus musculus	MEEBO	ILMN_188622	ILMN_188622	3110007F17RIK	scl073061.6_43				51772354	XM_486751	3110007F17Rik		ILMN_1254820	006110168	S	1	GCATTCCATGAGGTCATTGGTTGATGTGTTTCTAATTAGCAGAAAGGATT										
Mus musculus	RefSeq	ILMN_217781	ILMN_217781	SEMA4A	NM_013658.2	NM_013658.2		20351	31982742	NM_013658.2	Sema4a	NP_038686.2	ILMN_1215120	004490554	S	3000	GGGGGGCATAATCTGAGCCTTGTTCCCTTGTCCAGTGTGGCTGACCCTTG	3	-	88239976-88240025	3qF1	Mus musculus sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A (Sema4a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		Semab; AI132332; SemB	Semab; AI132332; SemB
Mus musculus	RefSeq	ILMN_214947	ILMN_214947	CAMK1G	NM_144817.2	NM_144817.2		215303	92110041	NM_144817.2	Camk1g	NP_659066.1	ILMN_1228546	002750072	S	720	CCCTACAGTAAGGCTGTGGACTGCTGGTCCATTGGTGTCATCACATACAT	1	-	195178564-195178613	1qH6	Mus musculus calcium/calmodulin-dependent protein kinase I gamma (Camk1g), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IDA]	CaMKIgamma; CLICK-III; MGC30513	CaMKIgamma; CLICK-III; MGC30513
Mus musculus	RefSeq	ILMN_214947	ILMN_214947	CAMK1G	NM_144817.2	NM_144817.2		215303	92110041	NM_144817.2	Camk1g	NP_659066.1	ILMN_2856865	003060541	S	2124	TCCAGGATTAGCTTCCCACTGCACGGAGACCCAGGCCACTCCAAAGCTCT	1	-	195172819-195172868	1qH6	Mus musculus calcium/calmodulin-dependent protein kinase I gamma (Camk1g), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IDA]	CaMKIgamma; CLICK-III; MGC30513	CaMKIgamma; CLICK-III; MGC30513
Mus musculus	MEEBO	ILMN_216712	ILMN_216712	PPP1R15B	scl17471.3_7	XM_148953.1			20910282	XM_148953.1	Ppp1r15b		ILMN_1239754	004200632	S	3123	AACCGGACTGCAGCTTAACAACACTTGATTTCAGATGATTAGGTTTTTGT						A protein complex that possesses magnesium-dependent protein serine/threonine phosphatase (AMD phosphatase) activity, and consists of a catalytic subunit and one or more regulatory subunits that dictates the phosphatase's substrate specificity, function, and activity [goid 164] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IMP]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IC ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [evidence IC ]		
Mus musculus	RefSeq	ILMN_195041	ILMN_316485	LOC100044927	XM_001473344.1	XM_001473344.1		100044927	149249375	XM_001473344.1	LOC100044927	XP_001473394.1	ILMN_2512023	002650433	S	945	CTGCATCTAAATCCAGTCAAGCCAAAAATACAAGTACTACTGGAAATAAG					PREDICTED: Mus musculus similar to TNF-stimulated gene 6 protein (LOC100044927), mRNA.					
Mus musculus	RefSeq	ILMN_217391	ILMN_217391	CAMKK2	NM_145358.1	NM_145358.1		207565	21703721	NM_145358.1	Camkk2	NP_663333.1	ILMN_2846803	001110202	S	2289	GGGGGCGGATTAGAAGGATCGGTGTGACCCACGTACAAACCCCATGCCTG	5	-	123183519-123183568	5qF	Mus musculus calcium/calmodulin-dependent protein kinase kinase 2, beta (Camkk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]	6330570N16Rik; mKIAA0787; AW061083	6330570N16Rik; mKIAA0787; AW061083
Mus musculus	RefSeq	ILMN_217391	ILMN_217391	CAMKK2	NM_145358.1	NM_145358.1		207565	21703721	NM_145358.1	Camkk2	NP_663333.1	ILMN_1256263	004640609	S	1816	CTGCACGGGGCTGCTGCACCCTGCGTTTCCATAGCAGCATGTCCTACGGA	5	-	123183992-123184041	5qF	Mus musculus calcium/calmodulin-dependent protein kinase kinase 2, beta (Camkk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]	6330570N16Rik; mKIAA0787; AW061083	6330570N16Rik; mKIAA0787; AW061083
Mus musculus	RefSeq	ILMN_194751	ILMN_194751	TMEM120A	NM_172541.2	NM_172541.2		215210	142365942	NM_172541.2	Tmem120a	NP_766129.1	ILMN_2509273	000010543	S	1044	CACAGCCAGCAGCACGGGAACAAGAAGGACTGAGCTAGATCTGATGCCAG	5	-	136211544-136211561:136211562-136211593	5qG2	Mus musculus transmembrane protein 120A (Tmem120a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Tmpit; 2010310D06Rik	Tmpit; 2010310D06Rik
Mus musculus	RefSeq	ILMN_197960	ILMN_228867	SEC14L5	XM_974707.2	XM_974707.2		665119	149267310	XM_974707.2	Sec14l5	XP_979801.2	ILMN_1216336	002140692	S	1357	TGAGGAAGGACAGAAGAGATGCGAAGGGAACACGAGACAATTTGGGCGTC	16	+	5176334-5176383	16qA1	PREDICTED: Mus musculus SEC14-like 5 (S. cerevisiae) (Sec14l5), mRNA.					
Mus musculus	Riken	ILMN_206048	ILMN_206048	HDAC2	ri|D130072G11|PX00186G03|AK051753|3251					AK051753	Hdac2		ILMN_1231785	001780390	S	3185	GCTTAGAGCAGCCAGCGTCTCAATACCAGGTGAAAGCCCACTGCAAAAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence TAS]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212548	ILMN_212548	BC016201	NM_145601.1	NM_145601.1		234586	21704201	NM_145601.1	BC016201	NP_663576.1	ILMN_2794844	007560551	S	1347	CATGCTCTCACAAGGGGAACCTGGCACCATCCACACTACACGGGACTCAG	8	-	97808123-97808172	8qD1	Mus musculus cDNA sequence BC016201 (BC016201), mRNA.				MGC27656	MGC27656
Mus musculus	MEEBO	ILMN_194859	ILMN_194859	IGHV1S30_X02462_IG_HEAVY_VARIABLE_1S30_12	IGHV1S30_X02462_Ig_heavy_variable_1S30_12						IGHV1S30_X02462_Ig_heavy_variable_1S30_12		ILMN_2510278	001240202	S	17	TCCTGTCAGGAACTGCACGTGTCCACTCTGAGGTCCAGCTGCAGCAGTCT										
Mus musculus	Riken	ILMN_203920	ILMN_203920	TEF3	ri|9830142B07|PX00119G11|AK036619|2491					AK036619	TEF3		ILMN_1259139	004200475	S	1958	GGGTAGAGGAGAGGAAGTCAGGAAATGGATCATCCCTATCGCCTCGCCTG										
Mus musculus	MEEBO	ILMN_186293	ILMN_186293	TRPM4	scl00059.1_21				32487285	AJ575814	trpm4		ILMN_2442265	001400202	S	12	TGAGCACACCACGGAGAAGCCCACAGATGCCTATGGGGACCTGGACTTCA										
Mus musculus	MEEBO	ILMN_186293	ILMN_186293	TRPM4	scl00059.1_21				32487285	AJ575814	trpm4		ILMN_2434289	001230326	S	18	GTACAGTCTCGTTACCCGCTCTTGGGGCTTTCGTGCCCCAAACTTGGTGG										
Mus musculus	RefSeq	ILMN_200475	ILMN_200475	LOC384315	XM_357564.1	XM_357564.1			38082430	XM_357564.1	LOC384315		ILMN_1218067	003370706	S	97	CATGGCCATGCCAAGAATGGGTACCTATCCCTGCTCCAGAACAGCGAGGA										
Mus musculus	RefSeq	ILMN_223458	ILMN_223458	GPRC2A-RS5	NM_029460.1	NM_029460.1		75835	13386401	NM_029460.1	Gprc2a-rs5	NP_083736.1	ILMN_2765652	004640196	S	132	ATTGTGACTGACTGTGGACACAAGAGAAAATCACCTGCTGTGCTTACAGG	5	+	171241-171290	7qB3	Mus musculus G protein-coupled receptor, family C, group 2, member A, related sequence 5 (Gprc2a-rs5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	4930562N12Rik; 1700108E19Rik; Casr-rs5	4930562N12Rik; 1700108E19Rik; Casr-rs5
Mus musculus	RefSeq	ILMN_223458	ILMN_223458	GPRC2A-RS5	NM_029460.1	NM_029460.1		75835	13386401	NM_029460.1	Gprc2a-rs5	NP_083736.1	ILMN_2765653	002120458	S	133	TTGTGACTGACTGTGGACACAAGAGAAAATCACCTGCTGTGCTTACAGGA	5	+	171242-171291	7qB3	Mus musculus G protein-coupled receptor, family C, group 2, member A, related sequence 5 (Gprc2a-rs5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	4930562N12Rik; 1700108E19Rik; Casr-rs5	4930562N12Rik; 1700108E19Rik; Casr-rs5
Mus musculus	RefSeq	ILMN_260026	ILMN_260026	DAB2	NM_001008702.1	NM_001008702.1		13132	56785429	NM_001008702.1	Dab2	NP_001008702.1	ILMN_3091641	001050609	A	2352	GGTCGTTTCTCAGCTAACTGCACCATTTACCAATCCTGCCCCAAGTGGTG	15	+	6389332-6389381	15qA1	Mus musculus disabled homolog 2 (Drosophila) (Dab2), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]	The process whereby cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes [goid 6907] [evidence IMP]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IMP]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IPI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI957090; Doc2; p96; AA960054; D15Wsu122e; 5730435J12Rik; Doc-2	AI957090; Doc2; p96; AA960054; D15Wsu122e; 5730435J12Rik; Doc-2
Mus musculus	RefSeq	ILMN_260026	ILMN_260026	DAB2	NM_001008702.1	NM_001008702.1		13132	56785429	NM_001008702.1	Dab2	NP_001008702.1	ILMN_3019670	000290605	I	1	CAGAGATAGAATCAAGCTTGCAAGAGATTTGTTGAAGAGAGAAAAGTCAA	15	+	6249849-6249898	15qA1	Mus musculus disabled homolog 2 (Drosophila) (Dab2), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]	The process whereby cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes [goid 6907] [evidence IMP]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IMP]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IPI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI957090; Doc2; p96; AA960054; D15Wsu122e; 5730435J12Rik; Doc-2	AI957090; Doc2; p96; AA960054; D15Wsu122e; 5730435J12Rik; Doc-2
Mus musculus	MEEBO	ILMN_215176	ILMN_215176	D9ERTD280E	scl35460.23_457	NM_177775.2			31343053	NM_177775.2	D9Ertd280e		ILMN_1231836	006290279	S	4171	GGCCAGTCCATACTGGAATGGTCTCTTCCTGTGTAGCACCGTCCATTTTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	MEEBO	ILMN_185334	ILMN_185334	1700081L16RIK	scl073513.2_0						1700081L16Rik		ILMN_2426180	002970468	S	6	GGTGGACCTGTCTATTTTTATGAGTTTCAGCACAGACCCCATTGCTTTCA										
Mus musculus	RefSeq	ILMN_213748	ILMN_213748	NOX3	NM_198958.2	NM_198958.2		224480	118130926	NM_198958.2	Nox3	NP_945196.1	ILMN_2640368	000460463	S	1459	GGGAAGGCTCATTTACTGAGCTACCATATATATCTCACTGGCTGGGATGA	17	-	3649988-3650037	17qA1	Mus musculus NADPH oxidase 3 (Nox3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A enzyme complex of which the core is a heterodimer composed of a light (alpha) and heavy (beta) chain, and requires several other water-soluble proteins of cytosolic origin for activity. Functions in superoxide generation by the NADPH-dependent reduction of O2 [goid 43020] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whose specific outcome is the progression of the otolith over time, from its formation to the mature structure [goid 48840] [evidence IMP]; The series of events in which a gravitational stimulus is received by a cell and converted into a molecular signal [goid 9590] [evidence IMP]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus [goid 9629] [evidence IMP]; A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus [goid 9629] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	nmf250; MGC124289; het; GP91-3	nmf250; MGC124289; het; GP91-3
Mus musculus	RefSeq	ILMN_208947	ILMN_208947	MAPK9	NM_207692.1	NM_207692.1		26420	46592832	NM_207692.1	Mapk9	NP_997575.1	ILMN_2716527	005270270	S	901	GTGGGTTGCATCATGGGAGAGCTGGTGAAAGGTTGTGTGATATTCCAAGG	11	+	49687780-49687829	11qB1.2	Mus musculus mitogen-activated protein kinase 9 (Mapk9), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p54aSAPK; Prkm9; JNK2; AI851083	p54aSAPK; Prkm9; JNK2; AI851083
Mus musculus	RefSeq	ILMN_194547	ILMN_227693	2610528A11RIK	XM_987802.1	XM_987802.1		70045	94396833	XM_987802.1	2610528A11Rik	XP_992896.1	ILMN_1222219	005050136	S	399	CACTTCAGACATCAGGGCGGATGGATTGCAGAATTCCAAGTCCTCATTCC				14qB	PREDICTED: Mus musculus RIKEN cDNA 2610528A11 gene (2610528A11Rik), mRNA.					
Mus musculus	Riken	ILMN_201734	ILMN_201734	1810064L21RIK	ri|1810064L21|ZX00043M04|AK007954|1376					AK007954	1810064L21Rik		ILMN_1259760	002940296	S	694	GATGAACGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCCA										
Mus musculus	MEEBO	ILMN_191463	ILMN_191463	C030030G16RIK	scl0227632.4_14				31341965	NM_175462	C030030G16Rik		ILMN_2605945	006130603	S	1285	GATGACTCTGAGCTCTGCCCTTGGGCTAGTCCCATCTCTCGGTGGAGCAC										
Mus musculus	MEEBO	ILMN_193566	ILMN_193566	HAGHL	scl50175.2.2489_38				21312166	NM_026897	Haghl		ILMN_2498376	002680341	S	10	CTGATTTGTTCACCCAACAGCCTGTGGGGTGCTTCATGCCCTTGGTCTCC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193566	ILMN_193566	HAGHL	scl50175.2.2489_38				21312166	NM_026897	Haghl		ILMN_2713586	003840240	S	1197	TAGGAGCTCTTGTGGGTCCAGAGACATATCCTGGGGACTGAGGAGGGTGA								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221842	ILMN_221842	ANKRD23	NM_153502.3	NM_153502.3		78321	118130132	NM_153502.3	Ankrd23	NP_705722.2	ILMN_2741117	002850064	S	1879	CCCAGCTGTTTCCAGTTTCACTGGTGTAAACCTGTACTGCGGGCAGGGCC	1	-	36587404-36587453	1qB	Mus musculus ankyrin repeat domain 23 (Ankrd23), mRNA.	A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MARP3; 2310041C05Rik; 1110058D09Rik; Darp; AI853437	MARP3; 2310041C05Rik; 1110058D09Rik; Darp; AI853437
Mus musculus	RefSeq	ILMN_230133	ILMN_230133	2610301F02RIK	NM_001025576.1	NM_001025576.1		545428	85701581	NM_001025576.1	2610301F02Rik	NP_001020747.1	ILMN_2991166	000780544	S	2290	GATGCTTCCAGAGGATGCAGGAAGGGAGGAGGGAACGGGGTGCTGTTAAC	2	-	76846139-76846141:76846142-76846188	2qC3	Mus musculus RIKEN cDNA 2610301F02 gene (2610301F02Rik), mRNA. XM_896676 XM_896697 XM_896711 XM_896724 XM_912240 XM_922274 XM_922277 XM_922280 XM_922286 XM_922295 XM_922299 XM_922303 XM_922309					
Mus musculus	RefSeq	ILMN_214696	ILMN_214696	PCGF2	NM_009545.1	NM_009545.1		22658	6678634	NM_009545.1	Pcgf2	NP_033571.1	ILMN_2650883	005290458	S	1133	AACCCCCTCAGAAGGCACCAACACCAGCGGGGCATCAGAGTGTGAGTCAG	11	-	97551555-97551604	11qD	Mus musculus polycomb group ring finger 2 (Pcgf2), mRNA.	A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IDA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	The modification of histones by addition of acetyl groups [goid 16573] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mel-18; Zfp144; Rnf110; Mel18	mel-18; Zfp144; Rnf110; Mel18
Mus musculus	RefSeq	ILMN_214908	ILMN_313132	LOC100047966	XR_034382.1	XR_034382.1		100047966	149267908	XR_034382.1	LOC100047966		ILMN_1250444	000450669	S	1077	AATGAGAATGAGAGGCTAAAGTCTTCATCTGTCTATTCACCAAAAGACAG					PREDICTED: Mus musculus similar to ENSANGP00000016398 (LOC100047966), misc RNA.					
Mus musculus	RefSeq	ILMN_189512	ILMN_313132	LOC100047966	XR_034382.1	XR_034382.1		100047966	149267908	XR_034382.1	LOC100047966		ILMN_2461936	004560270	S	7465	CAACTCCAAACACTAAGCGTGTTTTAGCATTTATTGTATGTACTAGATAA					PREDICTED: Mus musculus similar to ENSANGP00000016398 (LOC100047966), misc RNA.					
Mus musculus	RefSeq	ILMN_218934	ILMN_218934	RPS8	NM_009098.2	NM_009098.2		20116	31982034	NM_009098.2	Rps8	NP_033124.1	ILMN_1234590	003170608	S	352	GACCCTGGTGAAGAACTGCATCGTGCTTATTGACAGCACGCCGTACCGAC	4	-	116827678-116827715:116828176-116828187	4qD1	Mus musculus ribosomal protein S8 (Rps8), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]			MGC107577	MGC107577
Mus musculus	RefSeq	ILMN_223779	ILMN_223779	DSCR2	NM_019537.1	NM_019537.1		56088	9506554	NM_019537.1	Dscr2	NP_062410.1	ILMN_2874662	001440358	S	596	AAACTCAGACATTCAAAGATGCCCTCTGCTGCCCACTGCTGGAACAGCCG	16	-	96088728-96088777	16qC4	Mus musculus Down syndrome critical region homolog 2 (human) (Dscr2), mRNA.				AW552102	AW552102
Mus musculus	Riken	ILMN_204730	ILMN_204730	B930030P05RIK	ri|B930030P05|PX00163M08|AK047167|1757					AK047167	B930030P05Rik		ILMN_1238286	006550692	S	1653	CCAGAGGATCAGATGCCTTTATCTGACTTTCATGGGCACCAGGCACACAC										
Mus musculus	Riken	ILMN_203114	ILMN_203114	4930418I18RIK	ri|4930418I18|PX00030O15|AK029637|1345					AK029637	4930418I18Rik		ILMN_1258833	002370349	S	1194	GCTCTGAAGTGCCCCCTTGCCAAATGAACCGTGTAAGAGCTGATAGTCCC										
Mus musculus	RefSeq	ILMN_209720	ILMN_258698	EG433144	XM_484670.5	XM_484670.5		433144	149268938	XM_484670.5	EG433144	XP_484670.3	ILMN_2598532	007040646	S	297	GTTTAGTAAAGTGGCCAACGCCATCCTTTTCTTCCGACTGGATATTCGAA	17	+	87477895-87477944	17qE4	PREDICTED: Mus musculus predicted gene, EG433144 (EG433144), mRNA.					
Mus musculus	RefSeq	ILMN_209720	ILMN_258698	EG433144	XM_484670.5	XM_484670.5		433144	149268938	XM_484670.5	EG433144	XP_484670.3	ILMN_2755355	007570441	S	1719	GACGGAGGAACACATAAAAGGCTTGTATGTGTTATCATTTAAGGTCACTG	17	+	87479317-87479366	17qE4	PREDICTED: Mus musculus predicted gene, EG433144 (EG433144), mRNA.					
Mus musculus	RefSeq	ILMN_216929	ILMN_216929	NUTF2	NM_026532.3	NM_026532.3		68051	133892556	NM_026532.3	Nutf2	NP_080808.1	ILMN_2677092	004760754	S	1754	CTCCACAGGTTGCCTGGTTAGACCAGCATAGTCCTGGACGCTACACAGAA	8	+	108404090-108404139	8qD3	Mus musculus nuclear transport factor 2 (Nutf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]	MGC102015; Ntf2; AW546000; AI413596; AI115459; PP15; Ntf3; 2700067I02Rik	MGC102015; Ntf2; AW546000; AI413596; AI115459; PP15; Ntf3; 2700067I02Rik
Mus musculus	MEEBO	ILMN_224225	ILMN_224225	IRX3	scl34499.5.1_0				6680471	NM_008393	Irx3		ILMN_2776909	000060703	S	1479	CCATCTGGACGCTGCTCTGGTCTTATCAGCTCTCTCCTCGTCTTAACTTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191556	ILMN_191556	TSLP	NM_021367.1	NM_021367.1		53603	10946697	NM_021367.1	Tslp	NP_067342.1	ILMN_1218069	006960520	S	387	CAAACCTCACAAATTCTAAGATTGTGGTATTCCTTCATGCAATCTCCAGA	18	+	32978707-32978756	18qB1	Mus musculus thymic stromal lymphopoietin (Tslp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_191556	ILMN_191556	TSLP	NM_021367.1	NM_021367.1		53603	10946697	NM_021367.1	Tslp	NP_067342.1	ILMN_1220169	003800088	S	83	TTCTAACTGCAACTTCACGTCAATTACGAAAATATATTGTAACATAATTT	18	+	32975283-32975332	18qB1	Mus musculus thymic stromal lymphopoietin (Tslp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223519	ILMN_223519	BC037703	NM_172295.2	NM_172295.2		242125	31982049	NM_172295.2	BC037703	NP_758499.2	ILMN_3005789	003990619	S	3002	GGAGACCGCAGTCCACAACCCTTCACCCTATCCATCAGCCATTCTTCCCC	3	-	101942381-101942430	3qF2.2	Mus musculus cDNA sequence BC037703 (BC037703), mRNA.				MGC47256	MGC47256
Mus musculus	RefSeq	ILMN_223519	ILMN_223519	BC037703	NM_172295.2	NM_172295.2		242125	31982049	NM_172295.2	BC037703	NP_758499.2	ILMN_1219894	000110170	S	3027	CCTATCCATCAGCCATTCTTCCCCCCCATTCCATGACATTTCCAAGGCAA	3	-	101942356-101942405	3qF2.2	Mus musculus cDNA sequence BC037703 (BC037703), mRNA.				MGC47256	MGC47256
Mus musculus	RefSeq	ILMN_208906	ILMN_208906	TEX101	NM_019981.2	NM_019981.2		56746	118130519	NM_019981.2	Tex101	NP_064365.1	ILMN_2590670	001300711	S	773	TTACCAGTCATTCCTTCAGCCCCGGAAGGCAGAAATCGGGGCCTCTCAGA	7	-	25453262-25453311	7qA3	Mus musculus testis expressed gene 101 (Tex101), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			AI429076; 1700008H15Rik; TES101RP	AI429076; 1700008H15Rik; TES101RP
Mus musculus	RefSeq	ILMN_245834	ILMN_245834	RBP2	NM_009034.2	NM_009034.2		19660	31982060	NM_009034.2	Rbp2	NP_033060.2	ILMN_2813859	002000273	S	360	AGAAGGAGAACCGTGGCTGGAAGCAGTGGGTGGAGGGAGACAAGCTGTAC	9	+	98317191-98317240	9qE3.3	Mus musculus retinol binding protein 2, cellular (Rbp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 1523] [evidence TAS]	Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 5501] [evidence TAS]	CrbpII; Rbp-2; Crbp-2; MGC159254; MGC159256	CrbpII; Rbp-2; Crbp-2; MGC159254; MGC159256
Mus musculus	RefSeq	ILMN_214415	ILMN_214415	TBX19	NM_032005.4	NM_032005.4		83993	146149260	NM_032005.4	Tbx19	NP_114394.1	ILMN_2647782	006940050	S	2171	AGACAGCCTCTACCATTTGGCGTTGCTCCATGCCTCTGGCGTTGACTCCT				1qH2.3	Mus musculus T-box 19 (Tbx19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IMP]	Tpit; D1Ertd754e; AU019250	Tpit; D1Ertd754e; AU019250
Mus musculus	RefSeq	ILMN_225538	ILMN_225538	SLC1A2	NM_001077514.1	NM_001077514.1		20511	117606276	NM_001077514.1	Slc1a2	NP_001070982.1	ILMN_3123195	003940064	A	2090	CCAAGTCTGAGCTGGACACCATTGACTCCCAACACCGAATGCAGGAAGAC				2qE2	Mus musculus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (Slc1a2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IDA]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups [goid 43200] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glutamate(out) + Na+(out) = glutamate(in) + Na+(in) [goid 15501] [evidence IDA]	Eaat2; MGLT1; 1700091C19Rik; GLT-1; GLT1	Eaat2; MGLT1; 1700091C19Rik; GLT-1; GLT1
Mus musculus	RefSeq	ILMN_225538	ILMN_225538	SLC1A2	NM_001077514.1	NM_001077514.1		20511	117606276	NM_001077514.1	Slc1a2	NP_001070982.1	ILMN_3047516	006960746	I	471	TTACCCAGGAGGGGGGTGCGAGGGCGGAGAGAGGCTGCCCGTTAAATACC				2qE2	Mus musculus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (Slc1a2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IDA]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups [goid 43200] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glutamate(out) + Na+(out) = glutamate(in) + Na+(in) [goid 15501] [evidence IDA]	Eaat2; MGLT1; 1700091C19Rik; GLT-1; GLT1	Eaat2; MGLT1; 1700091C19Rik; GLT-1; GLT1
Mus musculus	RefSeq	ILMN_199895	ILMN_253147	ZMYM4	XM_355521.4	XM_355521.4		67785	94372371	XM_355521.4	Zmym4	XP_355521.4	ILMN_1242932	003060079	S	1359	CTGTTGTGAGAACTGTGGGGGTTACTGTTATAGTGGCTCTGGACAGTGCC					PREDICTED: Mus musculus zinc finger, MYM-type 4 (Zmym4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_193392	ILMN_226253	RNF13	NM_011883.2	NM_011883.2		24017	86439981	NM_011883.2	Rnf13	NP_036013.1	ILMN_2624767	005270725	S	790	AGAAATAGACTTCGTAAAGATCAACTTAAAAAACTTCCCGTACATAAATT	3	+	57624465-57624514	3qD	Mus musculus ring finger protein 13 (Rnf13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rzf; 2010001H16Rik	Rzf; 2010001H16Rik
Mus musculus	MEEBO	ILMN_187855	ILMN_187855	1810030N24RIK	scl24463.1_27				13384889	NM_025471	1810030N24Rik		ILMN_2447708	004010138	S	17	TTGCAGTGTATAATATCATTCCTTTTATTAAGGTGGAATCAGAGTTGTCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_187065	ILMN_187065	6530415H11RIK	scl30890.1.1_211						6530415H11Rik		ILMN_1232971	005700369	S	1	GAAGGTGCCTTATCTTCCCGCGGCGGATGGTAACAGACTCATTGCTCATG										
Mus musculus	RefSeq	ILMN_223770	ILMN_223770	GPR12	NM_008151.3	NM_008151.3		14738	58331127	NM_008151.3	Gpr12	NP_032177.1	ILMN_3137154	005960630	A	1904	CTCTGTGTTACAGTTTGGTATGCATGGTTACCTGTGGTAGTCAGATCACT	5	-	147394027-147394076	5qG3	Mus musculus G-protein coupled receptor 12 (Gpr12), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IDA]	Gpcr21; Gpcr20; Gpcr12; Gpcr01	Gpcr21; Gpcr20; Gpcr12; Gpcr01
Mus musculus	RefSeq	ILMN_223770	ILMN_223770	GPR12	NM_008151.3	NM_008151.3		14738	58331127	NM_008151.3	Gpr12	NP_032177.1	ILMN_1221410	001450291	S	1830	CCAGTAACAGAGGCGCGAACTCCTTTCTTTCCTTTCAGCAGTAGTGACTG	5	-	147394101-147394150	5qG3	Mus musculus G-protein coupled receptor 12 (Gpr12), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IDA]	Gpcr21; Gpcr20; Gpcr12; Gpcr01	Gpcr21; Gpcr20; Gpcr12; Gpcr01
Mus musculus	RefSeq	ILMN_199038	ILMN_199038	LOC380640	XM_358392.1	XM_358392.1			38090554	XM_358392.1	LOC380640		ILMN_1249296	007380468	S	445	GCTGGCTGGGTGCCTCCCCCAAGGCTGGAAAGCAGGAGCTGTCGAATAAT										
Mus musculus	RefSeq	ILMN_222943	ILMN_222943	HINT3	NM_025798.3	NM_025798.3		66847	142348865	NM_025798.3	Hint3	NP_080074.1	ILMN_2757092	002630168	S	88	GGAACTATGACAGCAACTGCGTGTTCTGCCGCGTGGCGGCGGGTCAGGAA	10	-	30338035-30338084	10qA4	Mus musculus histidine triad nucleotide binding protein 3 (Hint3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HINT-4; 0610010I17Rik; HINT4	HINT-4; 0610010I17Rik; HINT4
Mus musculus	MEEBO	ILMN_222990	ILMN_222990	D530030D03RIK	scl000995.1_20				41223369	BC065395	D530030D03Rik		ILMN_2757763	003830661	S	296	TCCAACAGAAATACACAACCGGGGACAGTTAAAGTCACACATGAAAGAAG										
Mus musculus	MEEBO	ILMN_213469	ILMN_213469	H2-M10.5	scl50748.3.1_3	NM_177637.2			31341690	NM_177637.2	H2-M10.5		ILMN_2637303	007000189	S	530	TGATGCAGAAAGGTGGAAGACTTACCTGCAAGGAGTGTGCGTGGAAAGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211525	ILMN_211525	FKHL18	NM_010226.1	NM_010226.1		14239	33563253	NM_010226.1	Fkhl18	NP_034356.1	ILMN_2935157	005360431	S	1170	GGCCAAGGACTGTGAGGATCAGAAGGCAGAAGTGAGCAGTCAGGCAGGTC	2	-	152623430-152623479	2qH1	Mus musculus forkhead-like 18 (Drosophila) (Fkhl18), mRNA.				Fkh3; FREAC10	Fkh3; FREAC10
Mus musculus	RefSeq	ILMN_221590	ILMN_221590	TCP11L1	NM_177190.2	NM_177190.2		320554	31343021	NM_177190.2	Tcp11l1	NP_796164.1	ILMN_2780088	002340553	S	3069	GACTGTGGCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGAC	2	-	104481212-104481261	2qE2	Mus musculus t-complex 11 like 1 (Tcp11l1), mRNA.				C130096D04Rik	C130096D04Rik
Mus musculus	MEEBO	ILMN_221084	ILMN_221084	2300006M17RIK	scl069466.1_2	XM_127388.3			38074740	XM_127388.3	2300006M17Rik		ILMN_1244338	002570739	S	1291	GATGTGTTCAGTCAACAGAGCATTCCTGTTTTTGAAAATGCAGGAAAGCC										
Mus musculus	RefSeq	ILMN_207028	ILMN_331269	LOC674427	XR_030796.1	XR_030796.1		674427	149258237	XR_030796.1	LOC674427		ILMN_1234412	005910603	S	154	TAAGACTCAGGTGCCTCTGGGAGCATTTTGGAAGCGTCAGCAGCCCGGCA					PREDICTED: Mus musculus similar to ribosomal protein L7a (LOC674427), misc RNA.					
Mus musculus	RefSeq	ILMN_193247	ILMN_254692	SLC11A1	NM_013612.1	NM_013612.1		18173	7363450	NM_013612.1	Slc11a1	NP_038640.1	ILMN_2675811	006940735	S	2210	TGGGATCCCTCTTCTGGTGTGTCTGAAGACAACAACAGTGTCCTCACATA	1	+	74432557-74432606	1qC3	Mus musculus solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 (Slc11a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC129157; Lsh; Nramp; Ity; Bcg; MGC129156; Nramp1	MGC129157; Lsh; Nramp; Ity; Bcg; MGC129156; Nramp1
Mus musculus	RefSeq	ILMN_193247	ILMN_254692	SLC11A1	NM_013612.1	NM_013612.1		18173	7363450	NM_013612.1	Slc11a1	NP_038640.1	ILMN_2674884	001410019	S	948	GCCCTATCGGTGTCCTTCATCATCAACCTCTTCGTCATGGCTGTTTTTGG	1	+	74428385-74428434	1qC3	Mus musculus solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 (Slc11a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC129157; Lsh; Nramp; Ity; Bcg; MGC129156; Nramp1	MGC129157; Lsh; Nramp; Ity; Bcg; MGC129156; Nramp1
Mus musculus	RefSeq	ILMN_254692	ILMN_254692	SLC11A1	NM_013612.1	NM_013612.1		18173	7363450	NM_013612.1	Slc11a1	NP_038640.1	ILMN_2983516	003850497	S	2014	CCCAGAACACCTCAAACAGAACTGCCACAACTCCATTGTCTCACTCCAGC	1	+	74432361-74432410	1qC3	Mus musculus solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 (Slc11a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC129157; Lsh; Nramp; Ity; Bcg; MGC129156; Nramp1	MGC129157; Lsh; Nramp; Ity; Bcg; MGC129156; Nramp1
Mus musculus	RefSeq	ILMN_193247	ILMN_254692	SLC11A1	NM_013612.1	NM_013612.1		18173	7363450	NM_013612.1	Slc11a1	NP_038640.1	ILMN_2692797	001580403	S	1113	TATCAAGGAGGTGTGATCCTAGGCTGTCTCTTTGGCCCTGCGGCCCTCTA	1	+	74430093-74430101:74430199-74430239	1qC3	Mus musculus solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 (Slc11a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC129157; Lsh; Nramp; Ity; Bcg; MGC129156; Nramp1	MGC129157; Lsh; Nramp; Ity; Bcg; MGC129156; Nramp1
Mus musculus	RefSeq	ILMN_195800	ILMN_230514	BSPRY	NM_138653.1	NM_138653.1		192120	20149729	NM_138653.1	Bspry	NP_619594.1	ILMN_2678134	004890255	S	1383	CTGGCCACAGTGAGACTAGATTCACCTCCCCATCACCCTTGCAGCATACG	4	+	62157562-62157605:62158016-62158021	4qB3	Mus musculus B-box and SPRY domain containing (Bspry), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 5499] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212340	ILMN_212340	BBC3	NM_133234.1	NM_133234.1		170770	18875397	NM_133234.1	Bbc3	NP_573497.1	ILMN_2920736	000450615	S	1650	GAGGGACGGCCCAGCCTGTAAGATACTGTACATGCACTGCTGTAGATATA	7	+	16903412-16903461	7qA2	Mus musculus BCL2 binding component 3 (Bbc3), mRNA.	The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [evidence ISS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISO]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	PUMA; PUMA/JFY1	PUMA; PUMA/JFY1
Mus musculus	RefSeq	ILMN_212340	ILMN_212340	BBC3	NM_133234.1	NM_133234.1		170770	18875397	NM_133234.1	Bbc3	NP_573497.1	ILMN_2690621	002320195	S	1503	ACGTGTGACCACTGGCATTCATTTGGGGGGTGGGAGATATTGGCGGAAGC	7	+	16903265-16903314	7qA2	Mus musculus BCL2 binding component 3 (Bbc3), mRNA.	The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [evidence ISS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISO]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	PUMA; PUMA/JFY1	PUMA; PUMA/JFY1
Mus musculus	RefSeq	ILMN_212340	ILMN_212340	BBC3	NM_133234.1	NM_133234.1		170770	18875397	NM_133234.1	Bbc3	NP_573497.1	ILMN_2690620	003360468	S	1508	GTGACCACTGGCATTCATTTGGGGGGTGGGAGATATTGGCGGAAGCCACC	7	+	16903270-16903319	7qA2	Mus musculus BCL2 binding component 3 (Bbc3), mRNA.	The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [evidence ISS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISO]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	PUMA; PUMA/JFY1	PUMA; PUMA/JFY1
Mus musculus	RefSeq	ILMN_210598	ILMN_210598	RPSA	NM_011029.3	NM_011029.3		16785	142347305	NM_011029.3	Rpsa	NP_035159.2	ILMN_2607253	005490554	S	1387	GACTGATAGTCTGATGGTGTGAATTCACAGTAAGTGGTTGGGATTGCCAG	9	+	120039995-120040014:120040103-120040132	9qF4	Mus musculus ribosomal protein SA (Rpsa), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with laminins, glycoproteins that are major constituents of the basement membrane of cells [goid 43236] [evidence IDA]	P40; Lamr1; P40-8; Lamrl1; MGC117921; 67kDa; Lamr; AL022858; MGC118614; P40-3; MLR	P40; Lamr1; P40-8; Lamrl1; MGC117921; 67kDa; Lamr; AL022858; MGC118614; P40-3; MLR
Mus musculus	RefSeq	ILMN_210598	ILMN_210598	RPSA	NM_011029.3	NM_011029.3		16785	142347305	NM_011029.3	Rpsa	NP_035159.2	ILMN_2727876	000610402	S	1776	CATTTTTGCTTGATGGTATTGAAGATTGTAAGACATTAAATTGTGTCATT	9	+	120040540-120040589	9qF4	Mus musculus ribosomal protein SA (Rpsa), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with laminins, glycoproteins that are major constituents of the basement membrane of cells [goid 43236] [evidence IDA]	P40; Lamr1; P40-8; Lamrl1; MGC117921; 67kDa; Lamr; AL022858; MGC118614; P40-3; MLR	P40; Lamr1; P40-8; Lamrl1; MGC117921; 67kDa; Lamr; AL022858; MGC118614; P40-3; MLR
Mus musculus	MEEBO	ILMN_184771	ILMN_184771	D930050A07RIK	scl1981.1.1_123						D930050A07Rik		ILMN_2421436	006270546	S	19	GAAGAGTGGAAAGTTACTGTTGTTGGGGGTCTGTGTAGGGCGGGCACACC										
Mus musculus	RefSeq	ILMN_222301	ILMN_222301	D230037D09RIK	NM_177140.2	NM_177140.2		320351	31342894	NM_177140.2	D230037D09Rik	NP_796114.1	ILMN_1231670	007400184	S	652	TGATTCCGTACTTACAGATGTTTTTGTTCCTTTATTCTTGTACGAGAGCG	12	+	103983052-103983101	12qE	Mus musculus RIKEN cDNA D230037D09 gene (D230037D09Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222301	ILMN_222301	D230037D09RIK	NM_177140.2	NM_177140.2		320351	31342894	NM_177140.2	D230037D09Rik	NP_796114.1	ILMN_2831141	004760059	S	1035	GTAAAATAGTGGCTTGTAACCTGCAGTCTTTAGAAACTTGAATAAGCGCC	12	+	103983435-103983484	12qE	Mus musculus RIKEN cDNA D230037D09 gene (D230037D09Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_235037	ILMN_235037	HEG1	NM_175256.4	NM_175256.4		77446	50872130	NM_175256.4	Heg1	NP_780465.3	ILMN_2920200	002070360	S	3536	CTCCAGTGCAGAAGTTGGGGAGCTAGGAGGAAGCCACCGGCAAGGATGCA	16	+	33767758-33767807	16qB3	Mus musculus HEG homolog 1 (zebrafish) (Heg1), mRNA.				BC038614; 5530401I02Rik; 9530025L16Rik; Gm629	BC038614; 5530401I02Rik; 9530025L16Rik; Gm629
Mus musculus	Riken	ILMN_202900	ILMN_202900	6430601O08RIK	ri|6430601O08|PX00048A07|AK032580|2149					AK032580	6430601O08Rik		ILMN_1220273	000050373	S	2035	GGAGCAAACACAGGCCTAAGACAGGTATGGCCGCCTAGCCACTCTATTCC										
Mus musculus	RefSeq	ILMN_200739	ILMN_234509	EG384525	XM_912340.3	XM_912340.3		384525	149256752	XM_912340.3	EG384525	XP_917433.1	ILMN_1234143	000010228	S	202	GAGGGCTGGAGAACTCACTGAGTGTGTGATCACCATCATGCAGAACCCAC				7qA1	PREDICTED: Mus musculus predicted gene, EG384525 (EG384525), mRNA.					
Mus musculus	RefSeq	ILMN_218090	ILMN_236101	HGD	NM_013547.2	NM_013547.2		15233	41152515	NM_013547.2	Hgd	NP_038575.1	ILMN_1212739	002760538	S	1385	CCAGGAGCCCGACAGAGCCTAAGTGAGACTGGAGCCCTCTACTGTAATTG	16	+	37631886-37631911:37631912-37631935	16qB3	Mus musculus homogentisate 1, 2-dioxygenase (Hgd), mRNA.		The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6572] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6570] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: homogentisate + O2 = 4-maleylacetoacetate [goid 4411] [evidence IEA]	aku	aku
Mus musculus	RefSeq	ILMN_197745	ILMN_197745	LOC241901	XM_143135.3	XM_143135.3			38077773	XM_143135.3	LOC241901		ILMN_2529219	006560142	S	413	GGCAGCTTCCCCTTGATGCATTTGTTTCAGTTCATTACCATTGGCTCGAC										
Mus musculus	RefSeq	ILMN_218859	ILMN_218859	JAK1	NM_146145.2	NM_146145.2		16451	111607495	NM_146145.2	Jak1	NP_666257.2	ILMN_2701093	004670458	S	3862	GTATTCTGCCTCTAAAGTTCCTCAACAAATACTCGAGTTACACATATGCA	4	-	100825966-100826015	4qC6	Mus musculus Janus kinase 1 (Jak1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA];  [goid 4718] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA960307; MGC37919; C130039L05Rik	AA960307; MGC37919; C130039L05Rik
Mus musculus	RefSeq	ILMN_214518	ILMN_218859	JAK1	NM_146145.2	NM_146145.2		16451	111607495	NM_146145.2	Jak1	NP_666257.2	ILMN_1213278	006650039	S	5108	TAGAGACACTTCACATTCCATGTGGGTCCTCCACTATGCCAGCCTGTGCC	4	-	100824720-100824769	4qC6	Mus musculus Janus kinase 1 (Jak1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA];  [goid 4718] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA960307; MGC37919; C130039L05Rik	AA960307; MGC37919; C130039L05Rik
Mus musculus	RefSeq	ILMN_195234	ILMN_231567	L3MBTL3	NM_172787.2	NM_172787.2		237339	142347618	NM_172787.2	L3mbtl3	NP_766375.1	ILMN_2641874	007330685	S	325	CTCCAGGCCCGTATTTCCACCTGCCTACTGGACATCTCCACCTGGATGTC	10	-	26063988-26064037	10qA4	Mus musculus l(3)mbt-like 3 (Drosophila) (L3mbtl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]		MBT-1; AI481284; MGC90546	MBT-1; AI481284; MGC90546
Mus musculus	RefSeq	ILMN_195234	ILMN_231567	L3MBTL3	NM_172787.2	NM_172787.2		237339	142347618	NM_172787.2	L3mbtl3	NP_766375.1	ILMN_2738224	006620035	S	3322	CGACCTTTCTTTGAATCCACATTTTTACTTTTGCACGCATCATGAATTGT	10	-	25995297-25995346	10qA4	Mus musculus l(3)mbt-like 3 (Drosophila) (L3mbtl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]		MBT-1; AI481284; MGC90546	MBT-1; AI481284; MGC90546
Mus musculus	RefSeq	ILMN_215888	ILMN_215888	PIGC	NM_026078.2	NM_026078.2		67292	84794579	NM_026078.2	Pigc	NP_080354.1	ILMN_3151917	003360139	A	3096	GGGTTATTGTCCCCCAAGATCACTTACCCTGCTTTCTCAAACCCACGGGC	1	+	163903361-163903410	1qH2.1	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class C (Pigc), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol [goid 17176] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	3110030E07Rik; AW212108	3110030E07Rik; AW212108
Mus musculus	RefSeq	ILMN_261161	ILMN_261161	SLC6A19	NM_028878.3	NM_028878.3		74338	146141193	NM_028878.3	Slc6a19	NP_083154.1	ILMN_3161159	002630255	S	1981	GCATAAGGCAGAAGATGGTGTGTGGAGGAAGCAAGATGCAGGACCCATGG				13qC1	Mus musculus solute carrier family 6 (neurotransmitter transporter), member 19 (Slc6a19), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of neutral amino acids, amino acids with no net charge, into, out of, within or between cells [goid 15804] [evidence IDA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	B<0>AT1; 4632401C08Rik; MGC130423; MGC130422	B<0>AT1; 4632401C08Rik; MGC130423; MGC130422
Mus musculus	RefSeq	ILMN_236675	ILMN_236675	TIA1	NM_011585.3	NM_011585.3		21841	79750236	NM_011585.3	Tia1	NP_035715.1	ILMN_2911936	005310674	S	4259	CTGGTTTAGCAGGTAAGGTGATTGTTGCCAAGCCTGATGCCCTGAGTTTG	6	+	86383276-86383325	6qD1	Mus musculus cytotoxic granule-associated RNA binding protein 1 (Tia1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42036] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IDA]	AI256674; mTIA-1; 2310050N03Rik	AI256674; mTIA-1; 2310050N03Rik
Mus musculus	RefSeq	ILMN_206624	ILMN_236675	TIA1	NM_011585.3	NM_011585.3		21841	79750236	NM_011585.3	Tia1	NP_035715.1	ILMN_1215055	003060544	S	2880	AGTAGAGAGGAAGGAGCCCTGTGCACTGTGGGTTTGAGGCCTGCAGAGAG	6	+	86381897-86381946	6qD1	Mus musculus cytotoxic granule-associated RNA binding protein 1 (Tia1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42036] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IDA]	AI256674; mTIA-1; 2310050N03Rik	AI256674; mTIA-1; 2310050N03Rik
Mus musculus	RefSeq	ILMN_198776	ILMN_228666	LOC638434	XM_914464.3	XM_914464.3		638434	149257997	XM_914464.3	LOC638434	XP_919557.3	ILMN_1243889	001740041	S	22	GGGAAAGGGTCCAACCCATATACACCTGAACCTGAGATGTGCCTAAGACA					PREDICTED: Mus musculus similar to glutamate dehydrogenase (NAD(P)+) (LOC638434), mRNA.					
Mus musculus	MEEBO	ILMN_217836	ILMN_217836	BC046418	scl0240505.1_158	XM_140553.3			38084832	XM_140553.3	BC046418		ILMN_2688176	006560273	S	5209	CTTTTCTGGAAGCTTCGATCTACCAAGTGTATTAGGGGAACATAGGGGGC										
Mus musculus	Riken	ILMN_202313	ILMN_202313	4833416I09RIK	ri|4833416I09|PX00028A20|AK014709|2121					AK014709	4833416I09Rik		ILMN_2548634	001580463	S	289	TCTGTCGGAGCCCGACTGCCTGTCCTCCGTGCGAGCGAGTGAAGGAGCGA										
Mus musculus	MEEBO	ILMN_190663	ILMN_190663	D0KIST3	scl0027492.1_262						D0Kist3		ILMN_1235602	004050477	S	1	CCTAGGCCTTGTGTCAGTGGAACTCTTCCGGGTCACAGTAATTCTCTGTT										
Mus musculus	RefSeq	ILMN_213174	ILMN_213174	CILP	NM_173385.2	NM_173385.2		214425	142373302	NM_173385.2	Cilp	NP_775561.1	ILMN_2634430	005340128	S	3773	GTCGTGAGACTGATGCACAGACTGTCACTTGTTAATTTAAACATATCTGG	9	+	65128032-65128081	9qC	Mus musculus cartilage intermediate layer protein, nucleotide pyrophosphohydrolase (Cilp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C130036G17Rik; 9830114D16	C130036G17Rik; 9830114D16
Mus musculus	RefSeq	ILMN_191197	ILMN_239503	DDX23	XM_001004293.1	XM_001004293.1		74351	94398880	XM_001004293.1	Ddx23	XP_001004293.1	ILMN_2476999	004010433	S	2715	GTCCTCTGACTGCCGAGGGGTAGAGCCATGTAGCTTAGCCTAAAAAGCTG	15	-	98476353-98476402	15qF1	PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 7 (Ddx23), mRNA.	A complex composed of three small nuclear ribonucleoproteins, snRNP U4, snRNP U6 and snRNP U5 [goid 46540] [evidence ISO]				
Mus musculus	MEEBO	ILMN_184149	ILMN_184149	4921524J17RIK	scl132.1.1_143				13385181	NM_025722	4921524J17Rik		ILMN_1250088	005260349	S	17	GAAATTATAATAGACACTCGATGAAACCCCTAGGCTTCCAGCGTCAGGGG										
Mus musculus	RefSeq	ILMN_219666	ILMN_219666	HNF1B	NM_009330.2	NM_009330.2		21410	111185899	NM_009330.2	Hnf1b	NP_033356.2	ILMN_1234902	000780309	S	2137	AAGGGAGAAACCCGTGGAGTCTCCCCTGCAACCCATCATCGAACAAACTG	11	+	83718713-83718762	11qC	Mus musculus HNF1 homeobox B (Hnf1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an inner cell mass cell [goid 1826] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IMP]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Hnf1b; vHNF1; HNF-1Beta; Tcf-2; AI987804; Hnf1beta; LFB3; AI385728	Hnf1b; vHNF1; HNF-1Beta; Tcf-2; AI987804; Hnf1beta; LFB3; AI385728
Mus musculus	RefSeq	ILMN_219666	ILMN_219666	HNF1B	NM_009330.2	NM_009330.2		21410	111185899	NM_009330.2	Hnf1b	NP_033356.2	ILMN_1249360	001030364	S	2140	GGAGAAACCCGTGGAGTCTCCCCTGCAACCCATCATCGAACAAACTGATG	11	+	83718716-83718765	11qC	Mus musculus HNF1 homeobox B (Hnf1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an inner cell mass cell [goid 1826] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IMP]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Hnf1b; vHNF1; HNF-1Beta; Tcf-2; AI987804; Hnf1beta; LFB3; AI385728	Hnf1b; vHNF1; HNF-1Beta; Tcf-2; AI987804; Hnf1beta; LFB3; AI385728
Mus musculus	RefSeq	ILMN_191818	ILMN_247254	UCN3	NM_031250.4	NM_031250.4		83428	142366005	NM_031250.4	Ucn3	NP_112540.2	ILMN_1238143	002760112	S	601	CTGGACCAGTCTTCAGCTGCCTCAACACAGCCCTATCTGAGGTCAAGAAG	13	-	3940761-3940810	13qA1	Mus musculus urocortin 3 (Ucn3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence TAS]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185085	ILMN_185085	V1RD13	NM_206868.1	NM_206868.1		232959	46047403	NM_206868.1	V1rd13	NP_996751.1	ILMN_2424036	002360437	S	778	TACACCTTTTCTATAGATTCTCGTCTCTTCATGAGTCATTTCAGTAAAGT	7	+	24679325-24679374	7qA3	Mus musculus vomeronasal 1 receptor, D13 (V1rd13), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gm473	Gm473
Mus musculus	Riken	ILMN_206246	ILMN_206246	C130080K17RIK	ri|C130080K17|PX00171A02|AK081831|1228					AK081831	C130080K17Rik		ILMN_2578681	002680379	S	1090	GGTCCTTATATGTGTGGCCATTCAGTGTTTGATAGGGATGCGTGTGAGGC										
Mus musculus	RefSeq	ILMN_192860	ILMN_192860	ZFP40	NM_009555.2	NM_009555.2		22700	113374191	NM_009555.2	Zfp40	NP_033581.2	ILMN_2492000	001230400	S	2906	AGACTGTATACCAAGGGAAAACGCTGCAAATGTGACATTTATTAAAATGT	17	-	23311959-23312008	17qA3.3	Mus musculus zinc finger protein 40 (Zfp40), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	CTfin12; Zfp-40	CTfin12; Zfp-40
Mus musculus	RefSeq	ILMN_185932	ILMN_248749	ZRANB2	NM_017381.2	NM_017381.2		53861	142374107	NM_017381.2	Zranb2	NP_059077.1	ILMN_2431218	007560112	S	2325	GGTTGCACACGAACTCTTACTCTCTTGTAATTGTGCCTCAGACTTCTCGA	3	+	157211012-157211061	3qH4	Mus musculus zinc finger, RAN-binding domain containing 2 (Zranb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AI227013; Zfp265; Zis; Znf265	AI227013; Zfp265; Zis; Znf265
Mus musculus	RefSeq	ILMN_196458	ILMN_196458	8430427K15	XM_144099.3	XM_144099.3			38078891	XM_144099.3	8430427K15		ILMN_1256147	002070241	S	4304	GGCCTTGGCTGTCATTGAGAAGAATCGGGCTAAAGTGGTAAGGGGCCTGC										
Mus musculus	RefSeq	ILMN_256713	ILMN_256713	SERPING1	NM_009776.1	NM_009776.1		12258	6753217	NM_009776.1	Serping1	NP_033906.1	ILMN_2913166	002000373	S	1509	CCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTC	2	-	84566435-84566484	2qD	Mus musculus serine (or cysteine) peptidase inhibitor, clade G, member 1 (Serping1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IDA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any component or product of the complement cascade [goid 1848] [evidence IPI]	C1nh; C1INH	C1nh; C1INH
Mus musculus	RefSeq	ILMN_212032	ILMN_212032	GRK5	NM_018869.2	NM_018869.2		14773	31980924	NM_018869.2	Grk5	NP_061357.2	ILMN_2637571	006980468	S	883	GCCTGGTTCTGACCATTATGAATGGTGGTGACCTGAAGTTTCACATCTAC	19	+	61152581-61152630	19qD3	Mus musculus G protein-coupled receptor kinase 5 (Grk5), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Gprk5; GRK5	Gprk5; GRK5
Mus musculus	RefSeq	ILMN_212032	ILMN_212032	GRK5	NM_018869.2	NM_018869.2		14773	31980924	NM_018869.2	Grk5	NP_061357.2	ILMN_1249435	004200669	S	1547	GCAGTTCTCCACTGTGAAAGGTGTCAACCTGGACCATACGGACGATGATT	19	+	61165852-61165901	19qD3	Mus musculus G protein-coupled receptor kinase 5 (Grk5), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Gprk5; GRK5	Gprk5; GRK5
Mus musculus	RefSeq	ILMN_214423	ILMN_214423	BCL2L1	NM_009743.4	NM_009743.4		12048	118129881	NM_009743.4	Bcl2l1	NP_033873.3	ILMN_2698430	001240546	S	1261	TCCCCTGAAGGAGACTAGCTTGCCTTGGTTTTGATGTGTGTGGCCTCAGA	2	-	152607464-152607513	2qH1	Mus musculus BCL2-like 1 (Bcl2l1), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Any constituent part of a mitochondrion, a semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 44429] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence ISO]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cycloheximide stimulus. Cycloheximide (actidione) is an antibiotic produced by some Streptomyces species which interferes with protein synthesis in eukaryotes [goid 46898] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IGI]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IDA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IGI]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IGI]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Bcl(X)L; BclX; Bcl-Xs; MGC99998; Bcl2l; bcl-x; Bcl-XL; MGC113803	Bcl(X)L; BclX; Bcl-Xs; MGC99998; Bcl2l; bcl-x; Bcl-XL; MGC113803
Mus musculus	RefSeq	ILMN_214423	ILMN_214423	BCL2L1	NM_009743.4	NM_009743.4		12048	118129881	NM_009743.4	Bcl2l1	NP_033873.3	ILMN_2742557	007510608	S	571	GTGAATGAACTCTTTCGGGATGGAGTAAACTGGGGTCGCATCGTGGCCTT	2	-	152655298-152655347	2qH1	Mus musculus BCL2-like 1 (Bcl2l1), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Any constituent part of a mitochondrion, a semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 44429] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence ISO]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cycloheximide stimulus. Cycloheximide (actidione) is an antibiotic produced by some Streptomyces species which interferes with protein synthesis in eukaryotes [goid 46898] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IGI]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IDA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IGI]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IGI]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Bcl(X)L; BclX; Bcl-Xs; MGC99998; Bcl2l; bcl-x; Bcl-XL; MGC113803	Bcl(X)L; BclX; Bcl-Xs; MGC99998; Bcl2l; bcl-x; Bcl-XL; MGC113803
Mus musculus	RefSeq	ILMN_214423	ILMN_214423	BCL2L1	NM_009743.4	NM_009743.4		12048	118129881	NM_009743.4	Bcl2l1	NP_033873.3	ILMN_2647885	004670463	S	690	TGCAAGTTGGATGGCCACCTATCTGAATGACCACCTAGAGCCTTGGATCC	2	-	152655179-152655228	2qH1	Mus musculus BCL2-like 1 (Bcl2l1), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Any constituent part of a mitochondrion, a semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 44429] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence ISO]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cycloheximide stimulus. Cycloheximide (actidione) is an antibiotic produced by some Streptomyces species which interferes with protein synthesis in eukaryotes [goid 46898] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IGI]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IDA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IGI]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IGI]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Bcl(X)L; BclX; Bcl-Xs; MGC99998; Bcl2l; bcl-x; Bcl-XL; MGC113803	Bcl(X)L; BclX; Bcl-Xs; MGC99998; Bcl2l; bcl-x; Bcl-XL; MGC113803
Mus musculus	RefSeq	ILMN_201315	ILMN_201315	LOC382421	XM_356497.1	XM_356497.1			38090762	XM_356497.1	LOC382421		ILMN_2541855	004540358	S	84	GTGCTCAGAGAGGGGTAACCAAAAAAGAAGTTCAAGGACCCAGTGCTTCC										
Mus musculus	RefSeq	ILMN_218439	ILMN_310068	LOC100045999	XM_001475422.1	XM_001475422.1		100045999	149260286	XM_001475422.1	LOC100045999	XP_001475472.1	ILMN_1235819	001980097	S	980	CCCATCGCAATATCCAGTGGGGAAATCTTGTTTGTTACTGTCATTCCCAT					PREDICTED: Mus musculus similar to RAN, member RAS oncogene family (LOC100045999), mRNA.					
Mus musculus	Riken	ILMN_206060	ILMN_206060	D330003G07RIK	ri|D330003G07|PX00190J01|AK052176|3213					AK052176	D330003G07Rik		ILMN_1242134	002070022	S	3016	TGAAGTTGGAAGTGGGTGTAGGGGAGCAGGAGAGAATCTGGGAGGAGGGG										
Mus musculus	RefSeq	ILMN_211619	ILMN_211619	NAGS	NM_145829.1	NM_145829.1		217214	22003873	NM_145829.1	Nags	NP_665828.1	ILMN_2617735	002100093	S	354	GCAATTCCAGACCTGCTACCATTCGGTGGACAAGCCCTTCGCCGTCATGG	11	+	102007254-102007303	11qD	Mus musculus N-acetylglutamate synthase (Nags), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]	A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6526] [evidence IEA]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: ATP + N-acetyl-L-glutamate = ADP + N-acetyl-L-glutamate 5-phosphate [goid 3991] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + L-glutamate = CoA + N-acetyl-L-glutamate [goid 4042] [evidence IDA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	1700120E20Rik; RP23-398F7.13; argA; AI415708	1700120E20Rik; RP23-398F7.13; argA; AI415708
Mus musculus	RefSeq	ILMN_185540	ILMN_230288	LOC636677	XM_912159.2	XM_912159.2		636677	94377629	XM_912159.2	LOC636677	XP_917252.2	ILMN_1236253	006480100	S	64	GCTAATCAGTGCTTCAGTCATAATGTCCAGAGGACAAATTCTTCTCACCC					PREDICTED: Mus musculus similar to Ig kappa chain V-IV region S107B precursor (LOC636677), mRNA.					
Mus musculus	MEEBO	ILMN_220575	ILMN_220575	PRICKLE2	scl0243548.1_22	XM_144905.3			38084964	XM_144905.3	Prickle2		ILMN_2723957	000290164	S	2899	CGTAATGTGATAGTGGTCGGGGAATCGGGGAGATGGGAGCTAAGAATGTA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The apical end of the lateral plasma membrane of epithelial cells [goid 16327] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IDA]	Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell [goid 45197] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214795	ILMN_214795	OLFR1048	NM_147014.1	NM_147014.1		259016	22128908	NM_147014.1	Olfr1048	NP_667225.1	ILMN_1251051	001940291	S	647	CCTCCCTCTTTGTAGTCTTAGTATCTTACCTTCTTATTCTACTGGCCATA	2	-	86076294-86076343	2qD	Mus musculus olfactory receptor 1048 (Olfr1048), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR187-2	MOR187-2
Mus musculus	RefSeq	ILMN_220042	ILMN_220042	PRL8A6	NM_011167.2	NM_011167.2		19112	133892523	NM_011167.2	Prl8a6	NP_035297.1	ILMN_2716897	002450164	S	685	CAGCTCAGATTATTGAAGTGTCTCATAACTGGGAAAGATTGCTAAGTGCA	13	-	27524846-27524851:27524852-27524895	13qA3.1	Mus musculus prolactin family 8, subfamily a, member 6 (Prl8a6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISA]	PLP-Ca; Prlpc1; Prlpc; PLP-calpha	PLP-Ca; Prlpc1; Prlpc; PLP-calpha
Mus musculus	RefSeq	ILMN_258321	ILMN_258321	PTBP1	NM_001077363.1	NM_001077363.1		19205	116517300	NM_001077363.1	Ptbp1	NP_001070831.1	ILMN_3064941	006020605	I	1005	CCGGCATAATGTCAGCCTCTCCGTATGCAGGAGCCGGGTTCCCTCCCACC	10	+	79322868-79322917	10qC1	Mus musculus polypyrimidine tract binding protein 1 (Ptbp1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AA407203; PTB3; PTB-1; HNRPI; PTB2; AL033359; Ptb; PTB4; pPTB	AA407203; PTB3; PTB-1; HNRPI; PTB2; AL033359; Ptb; PTB4; pPTB
Mus musculus	RefSeq	ILMN_190800	ILMN_258321	PTBP1	NM_001077363.1	NM_001077363.1		19205	116517300	NM_001077363.1	Ptbp1	NP_001070831.1	ILMN_2473391	000240446	S	1009	CATAATGTCAGCCTCTCCGTATGCAGGAGCCGGGTTCCCTCCCACCTTTG	10	+	79322872-79322921	10qC1	Mus musculus polypyrimidine tract binding protein 1 (Ptbp1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AA407203; PTB3; PTB-1; HNRPI; PTB2; AL033359; Ptb; PTB4; pPTB	AA407203; PTB3; PTB-1; HNRPI; PTB2; AL033359; Ptb; PTB4; pPTB
Mus musculus	RefSeq	ILMN_209736	ILMN_258321	PTBP1	NM_001077363.1	NM_001077363.1		19205	116517300	NM_001077363.1	Ptbp1	NP_001070831.1	ILMN_1224003	004040008	S	2851	TTTATAACCTCTGTCTTCCCTGAGCCCTTCATTCTGAGCTGTAGGCCAGG	10	+	79327096-79327145	10qC1	Mus musculus polypyrimidine tract binding protein 1 (Ptbp1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AA407203; PTB3; PTB-1; HNRPI; PTB2; AL033359; Ptb; PTB4; pPTB	AA407203; PTB3; PTB-1; HNRPI; PTB2; AL033359; Ptb; PTB4; pPTB
Mus musculus	RefSeq	ILMN_204398	ILMN_258321	PTBP1	NM_001077363.1	NM_001077363.1		19205	116517300	NM_001077363.1	Ptbp1	NP_001070831.1	ILMN_1243690	003180504	S	1774	CTAGGTGCCTGTGGGCCTGCATCAGCTTCCACCATTCCAGAAAAGCCACT	10	+	79326019-79326022:79326023-79326068	10qC1	Mus musculus polypyrimidine tract binding protein 1 (Ptbp1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AA407203; PTB3; PTB-1; HNRPI; PTB2; AL033359; Ptb; PTB4; pPTB	AA407203; PTB3; PTB-1; HNRPI; PTB2; AL033359; Ptb; PTB4; pPTB
Mus musculus	RefSeq	ILMN_192577	ILMN_192577	ZFP202	NM_030713.1	NM_030713.1		80902	13507659	NM_030713.1	Zfp202	NP_109638.1	ILMN_1223591	007400634	S	3297	CCTGGTGGCCTACGGGTCTTTTACCTGTTCAATGTTCCCAGGAGGCTGAA	9	+	40020619-40020668	9qA5.1	Mus musculus zinc finger protein 202 (Zfp202), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Znf202; C130037E22Rik	Znf202; C130037E22Rik
Mus musculus	RefSeq	ILMN_219233	ILMN_219233	TPP1	NM_009906.4	NM_009906.4		12751	145966697	NM_009906.4	Tpp1	NP_034036.1	ILMN_2705991	003710402	S	3188	CGAAGCCCCTCATCTTCCAAACCAAGCAGTCTATGTATTTGTGCAAACCC				7qE3	Mus musculus tripeptidyl peptidase I (Tpp1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISS]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another [goid 43171] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the release of an N-terminal tripeptide from a polypeptide [goid 8240] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISS]	TPP-I; Cln2	TPP-I; Cln2
Mus musculus	Riken	ILMN_206978	ILMN_206978	4933402D05RIK	ri|4933402D05|PX00641L20|AK077083|1996					AK077083	4933402D05Rik		ILMN_2584118	002630110	S	1513	TCTTAGTTTTGTGACTTTTGAGGTGGAAGTGTATGCCAGGGCCTCCCCAG										
Mus musculus	Riken	ILMN_204612	ILMN_204612	9930108O06RIK	ri|9930108O06|PX00062H11|AK037075|2770					AK037075	9930108O06Rik		ILMN_2566321	003400521	S	2561	ACAGGCCTACATGGCTTCCTGTATTGGACAACGCTGATCTGAGAGAACTC										
Mus musculus	RefSeq	ILMN_218671	ILMN_225322	ATG9A	NM_001003917.3	NM_001003917.3		245860	148747447	NM_001003917.3	Atg9a	NP_001003917.2	ILMN_2698801	003610168	S	3482	CAGAAGTGTGACCTCAGTTATATATACATCCCAGCTCTGCCCAGTATCCC				1qC3	Mus musculus autophagy-related 9A (yeast) (Atg9a), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Apg9l1; MGC105176; Atg9; AU019532; Atg9l1	Apg9l1; MGC105176; Atg9; AU019532; Atg9l1
Mus musculus	RefSeq	ILMN_218715	ILMN_225322	ATG9A	NM_001003917.3	NM_001003917.3		245860	148747447	NM_001003917.3	Atg9a	NP_001003917.2	ILMN_2699338	005960681	S	446	GACTATGACATCCTCTTTGCCAACAAGATGGTGAACCACAGTCTCCATCC				1qC3	Mus musculus autophagy-related 9A (yeast) (Atg9a), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Apg9l1; MGC105176; Atg9; AU019532; Atg9l1	Apg9l1; MGC105176; Atg9; AU019532; Atg9l1
Mus musculus	Riken	ILMN_204349	ILMN_204349	A930015C19RIK	ri|A930015C19|PX00066M06|AK044477|2420					AK044477	A930015C19Rik		ILMN_1245637	000650367	S	2277	CAGGGCTGTGCTTGACTAGGGTGGGAAAGCAAGCTCATCAGACATGTGGC										
Mus musculus	RefSeq	ILMN_210696	ILMN_210696	OLFR63	NM_146937.1	NM_146937.1		258939	22128642	NM_146937.1	Olfr63	NP_667148.1	ILMN_2608264	005870327	S	750	GATTGTGCACTACGGCTTTGCCTCCATAATTTACCTCAAGTCCAGGGGAC	17	+	33406420-33406469	17qB1	Mus musculus olfactory receptor 63 (Olfr63), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISO]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISO]	M4; MOR267-1	M4; MOR267-1
Mus musculus	RefSeq	ILMN_209695	ILMN_238706	1700041C02RIK	NM_029286.1	NM_029286.1		73332	117676404	NM_029286.1	1700041C02Rik	NP_083562.1	ILMN_2724985	007650010	S	1023	AGCTGCGGTACGAGCGGGGCCGGAGCCTGGACTTGAAACAACATAACAGT	4	-	119032186-119032235	4qD2.1	Mus musculus RIKEN cDNA 1700041C02 gene (1700041C02Rik), mRNA.				1700111D19Rik; RP23-390M8.2; 1700001O02Rik; 4930445I03Rik	1700111D19Rik; RP23-390M8.2; 1700001O02Rik; 4930445I03Rik
Mus musculus	RefSeq	ILMN_188439	ILMN_188439	V1RH3	NM_134212.1	NM_134212.1		171246	21717736	NM_134212.1	V1rh3	NP_598973.1	ILMN_1231031	000060349	S	258	GGAAAGGGTATCCCGTGGCCTCTCCATCTGTACCAGCAGTCTCCTCACTG	13	+	22487155-22487204	13qA3.1	Mus musculus vomeronasal 1 receptor, H3 (V1rh3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_188439	ILMN_188439	V1RH3	NM_134212.1	NM_134212.1		171246	21717736	NM_134212.1	V1rh3	NP_598973.1	ILMN_2940118	001260725	S	840	CCCTTTTGTGCTGATTCACAGGGATGGGCTTCTGGTTGATTGGTGGCATG	13	+	22487737-22487786	13qA3.1	Mus musculus vomeronasal 1 receptor, H3 (V1rh3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_220005	ILMN_220005	LPXN	NM_134152.3	NM_134152.3		107321	146149294	NM_134152.3	Lpxn	NP_598913.1	ILMN_1230587	007050433	S	1292	GTCCCCAGCCTTCTGTTCAGTGGGCTAATGGAGTACAAACGGGCCTTTGT				19qA	Mus musculus leupaxin (Lpxn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	A530083L21Rik; LDPL; AV278559; 4933402K05Rik	A530083L21Rik; LDPL; AV278559; 4933402K05Rik
Mus musculus	RefSeq	ILMN_211474	ILMN_211474	TAF8	NM_022015.3	NM_022015.3		63856	141803261	NM_022015.3	Taf8	NP_071298.1	ILMN_2616261	002260754	S	2435	ATTTATATATTTCTATTTTTTATAATGGGGGAGACTTATTGGAAGGAGAA	17	-	47625293-47625342	17qC	Mus musculus TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq (Taf8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of adipocyte differentiation [goid 45598] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence ISA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]	AW260255; Tbn	AW260255; Tbn
Mus musculus	Riken	ILMN_204572	ILMN_204572	C130032B16RIK	ri|C130032B16|PX00168B17|AK048052|1428					AK048052	C130032B16Rik		ILMN_1250126	006480706	S	1129	GCATCAGCCTCCTGAGTGCCGGAATTTTAGGTTTGAACCACCACACCGGG										
Mus musculus	RefSeq	ILMN_217849	ILMN_217849	CBFA2T2	NM_172860.1	NM_172860.1		12396	41152519	NM_172860.1	Cbfa2t2	NP_766448.1	ILMN_2752204	006290170	S	2151	TATACACCAGCTCCCTCCGACTCCTTGCATTAGCATATTGTCAATAGTGT	2	+	154361197-154361246	2qH1	Mus musculus core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) (Cbfa2t2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	A430091M07; Cbfa2t2h; MTGR1; C330013D05Rik	A430091M07; Cbfa2t2h; MTGR1; C330013D05Rik
Mus musculus	RefSeq	ILMN_217849	ILMN_217849	CBFA2T2	NM_172860.1	NM_172860.1		12396	41152519	NM_172860.1	Cbfa2t2	NP_766448.1	ILMN_1235850	000290767	S	2368	CCTGAGCTGCTCAGAGCTGTTAAGATGCTCAGAAATGCAAGAAAGAAGTC	2	+	154361414-154361463	2qH1	Mus musculus core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) (Cbfa2t2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	A430091M07; Cbfa2t2h; MTGR1; C330013D05Rik	A430091M07; Cbfa2t2h; MTGR1; C330013D05Rik
Mus musculus	RefSeq	ILMN_217849	ILMN_217849	CBFA2T2	NM_172860.1	NM_172860.1		12396	41152519	NM_172860.1	Cbfa2t2	NP_766448.1	ILMN_1228018	005360280	S	2151	GTATACACCAGCTCCCTCCGACTCCTTGCATTAGCATATTGTCAATAGTG	2	+	154361197-154361246	2qH1	Mus musculus core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human) (Cbfa2t2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	A430091M07; Cbfa2t2h; MTGR1; C330013D05Rik	A430091M07; Cbfa2t2h; MTGR1; C330013D05Rik
Mus musculus	MEEBO	ILMN_224276	ILMN_224276	BC051665	scl0218275.1_67				40255290	NM_199148	BC051665		ILMN_1221521	006960280	S	1033	ATTGCTACCTATGCCATCTACCCCACCGTGTGAGCTGCCCGGACAGCAAG								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]		
Mus musculus	Riken	ILMN_206184	ILMN_206184	E330023P07RIK	ri|E330023P07|PX00212N09|AK087809|1328					AK087809	E330023P07Rik		ILMN_1240762	003610079	S	1001	CCTGGATGATGATGCGGCCACTTACTCCTGCTCTGCCTCTGTTGAGCTGC										
Mus musculus	RefSeq	ILMN_235526	ILMN_235526	H2-Q8	NM_023124.2	NM_023124.2		15019	24475670	NM_023124.2	H2-Q8	NP_075613.1	ILMN_2951592	002750128	S	498	CGGACATGGAGGCACAGATCACCCGACGCAAGTGGGAGCAGGCTGGTATT	17	+	35003000-35003049	17qB1	Mus musculus histocompatibility 2, Q region locus 8 (H2-Q8), mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]		Qa-8; Qa8; Ms10t; MMS10-T; H-2Q8; Qa-2	Qa-8; Qa8; Ms10t; MMS10-T; H-2Q8; Qa-2
Mus musculus	Riken	ILMN_202600	ILMN_202600	8030453O22RIK	ri|8030453O22|PX00103F15|AK020207|751					AK020207	8030453O22Rik		ILMN_1224760	007560682	S	524	GCTGCCGCCTGGGGATCAGGATGTAAACTTCTCAGCTACTGTTCTAGTGC										
Mus musculus	RefSeq	ILMN_194080	ILMN_194080	VTI1B	NM_016800.2	NM_016800.2		53612	31980616	NM_016800.2	Vti1b	NP_058080.2	ILMN_2503190	004780437	S	699	GGAGCTAGCCATCCTGGTCGGTCTGGTGTATTACAAATTCTTTCGACACC	12	-	80257455-80257461:80257462-80257504	12qC3	Mus musculus vesicle transport through interaction with t-SNAREs 1B homolog (Vti1b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Vti1-rp1; GES30; SNARE; AU015348; MVti1b	Vti1-rp1; GES30; SNARE; AU015348; MVti1b
Mus musculus	RefSeq	ILMN_194080	ILMN_194080	VTI1B	NM_016800.2	NM_016800.2		53612	31980616	NM_016800.2	Vti1b	NP_058080.2	ILMN_1224112	004260739	S	825	GCTGCTGTGGGCTAACAGTTCAAGAATGTATTGTCTTGTCAGACTATGGG	12	-	80257329-80257378	12qC3	Mus musculus vesicle transport through interaction with t-SNAREs 1B homolog (Vti1b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Vti1-rp1; GES30; SNARE; AU015348; MVti1b	Vti1-rp1; GES30; SNARE; AU015348; MVti1b
Mus musculus	RefSeq	ILMN_187425	ILMN_194080	VTI1B	NM_016800.2	NM_016800.2		53612	31980616	NM_016800.2	Vti1b	NP_058080.2	ILMN_2444023	006560286	S	745	GTCGAAAGAATTTGTAATACACCAGACCGACCAGGATGGCTAGCTCCAGC	12	-	80257409-80257458	12qC3	Mus musculus vesicle transport through interaction with t-SNAREs 1B homolog (Vti1b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Vti1-rp1; GES30; SNARE; AU015348; MVti1b	Vti1-rp1; GES30; SNARE; AU015348; MVti1b
Mus musculus	RefSeq	ILMN_249521	ILMN_249521	SPINK11	NM_001048217.1	NM_001048217.1		433181	115292430	NM_001048217.1	Spink11	NP_001041682.1	ILMN_2950574	000670465	S	202	GAGTGAATCTGACTGCTCCAGAACGCTGATCCCAGTTTGTGCAGATAATC				18qB3	Mus musculus serine peptidase inhibitor, Kazal type 11 (Spink11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	9230112K01Rik	9230112K01Rik
Mus musculus	RefSeq	ILMN_200002	ILMN_200002	LOC381631	XM_355595.1	XM_355595.1			38079640	XM_355595.1	LOC381631		ILMN_2537248	006400110	S	277	TATCCTACCAAGCCAGCCATTGAGAACTGGGGCAGTGACTTCCTGTGCAC										
Mus musculus	RefSeq	ILMN_214988	ILMN_214988	PSEN2	NM_011183.1	NM_011183.1		19165	6755187	NM_011183.1	Psen2	NP_035313.1	ILMN_2941992	000990682	S	1658	CAAGCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGAT	1	-	182157384-182157433	1qH4	Mus musculus presenilin 2 (Psen2), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IMP]; The process whereby precursor cell type acquires the specialized features of a hemopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells [goid 2244] [evidence IGI]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage [goid 2573] [evidence IGI]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response [goid 2286] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IGI]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IGI]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IGI]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IGI]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IGI]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IDA]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IGI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ALG-3; Ad4h; AI266870; PS-2; PS2	ALG-3; Ad4h; AI266870; PS-2; PS2
Mus musculus	RefSeq	ILMN_211419	ILMN_211419	SPC24	NM_026282.4	NM_026282.4		67629	146135000	NM_026282.4	Spc24	NP_080558.1	ILMN_2615709	004810047	S	107	CTACGAGCAGATGATGGAGCGGCTGCTGGAGATGCAGGACGGCGCCTACC				9qA3	Mus musculus SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) (Spc24), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		Spbc24; 2410030K01Rik; AV109292	Spbc24; 2410030K01Rik; AV109292
Mus musculus	RefSeq	ILMN_203619	ILMN_310792	LOC100046259	XM_001476332.1	XM_001476332.1		100046259	149260292	XM_001476332.1	LOC100046259	XP_001476382.1	ILMN_1219962	003400041	S	3305	TCGGACGGCCCGGAGCAGTGTGAGCTGGTGCAGAGACCGAGATACCGAAG					PREDICTED: Mus musculus similar to Cacna2d2 protein (LOC100046259), mRNA.					
Mus musculus	RefSeq	ILMN_191074	ILMN_310792	LOC100046259	XM_001476332.1	XM_001476332.1		100046259	149260292	XM_001476332.1	LOC100046259	XP_001476382.1	ILMN_2475878	000150670	S	5034	AAAATATTTTCAAATGGTTTATTACAGAAGATCAGTTATTAAATAATGTT					PREDICTED: Mus musculus similar to Cacna2d2 protein (LOC100046259), mRNA.					
Mus musculus	RefSeq	ILMN_191074	ILMN_310792	LOC100046259	XM_001476332.1	XM_001476332.1		100046259	149260292	XM_001476332.1	LOC100046259	XP_001476382.1	ILMN_2762925	003140204	S	4672	GCTGTGTCCTGTGGGGGCGTGTGTGTAACTGTAGTGTAGTCAGGTGCTCA					PREDICTED: Mus musculus similar to Cacna2d2 protein (LOC100046259), mRNA.					
Mus musculus	RefSeq	ILMN_216305	ILMN_310254	LOC100047794	XR_033964.1	XR_033964.1		100047794	149263122	XR_033964.1	LOC100047794		ILMN_2669569	003060156	S	1850	GAGTAGTAAGTCACCCTACACTTCCTGTTACAATAACTGCTCATGAAGAC					PREDICTED: Mus musculus similar to SG2NA beta (LOC100047794), misc RNA.					
Mus musculus	RefSeq	ILMN_217661	ILMN_217661	APITD1	NM_027263.1	NM_027263.1		69928	21312473	NM_027263.1	Apitd1	NP_081539.1	ILMN_2983714	002570398	S	626	CACGGGGCATAGGAAAGGCTTGCACTTGGGTGGCACAGCGTGACTTAGTG	4	-	148502662-148502711	4qE2	Mus musculus apoptosis-inducing, TAF9-like domain 1 (Apitd1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]			MGC58422; 2610040C18Rik; 2810407L01Rik	MGC58422; 2610040C18Rik; 2810407L01Rik
Mus musculus	RefSeq	ILMN_216544	ILMN_216544	COL6A2	NM_146007.1	NM_146007.1		12834	22203746	NM_146007.1	Col6a2	NP_666119.1	ILMN_1216661	001440189	S	3146	CAGCTTCTTTGACAGGTTCATCCGCTGGATCTGTTAGCACCGCCATGCTC	10	-	76061411-76061460	10qC1	Mus musculus procollagen, type VI, alpha 2 (Col6a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Col6a-2; MGC36205	Col6a-2; MGC36205
Mus musculus	RefSeq	ILMN_231205	ILMN_231205	SMAD6	NM_008542.2	NM_008542.2		17130	31560672	NM_008542.2	Smad6	NP_032568.2	ILMN_3008748	001450672	S	817	AAGACGGTCACGTACTCGCTGCTCAAGAGGCTCAAGGAGCGTTCGCTGGA	9	-	63868262-63868311	9qC	Mus musculus MAD homolog 6 (Drosophila) (Smad6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Madh6	Madh6
Mus musculus	RefSeq	ILMN_220334	ILMN_220334	TMED9	NM_026211.1	NM_026211.1		67511	13385717	NM_026211.1	Tmed9	NP_080487.1	ILMN_2981871	000610162	S	1311	CAAACCAAGCAGAGACTTTGGTGCTGGTTGGAAACAGAGCCTACAGAGTC	13	+	55607184-55607233	13qB1	Mus musculus transmembrane emp24 protein transport domain containing 9 (Tmed9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		2400003B06Rik	2400003B06Rik
Mus musculus	RefSeq	ILMN_224242	ILMN_228852	OLFR1204	NM_146463.2	NM_146463.2		258455	110671323	NM_146463.2	Olfr1204	NP_666674.2	ILMN_1224002	004210075	S	618	GTTAAATTTCCTCTTACTGCTTGTGTCCTACTTGGTCATCCTTAACTCCC	2	+	88692726-88692775	2qE1	Mus musculus olfactory receptor 1204 (Olfr1204), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR232-6	MOR232-6
Mus musculus	RefSeq	ILMN_218077	ILMN_218077	DMRT3	NM_177360.2	NM_177360.2		240590	31340761	NM_177360.2	Dmrt3	NP_796334.1	ILMN_1230366	000110440	S	2069	GAATTCCTCAGGACACTGGAAACCTTAGGGAGTGGTTCGATTGCCAACCG	19	+	25698089-25698138	19qC1	Mus musculus doublesex and mab-3 related transcription factor 3 (Dmrt3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220176	ILMN_220176	OLFR1010	NM_207149.2	NM_207149.2		258255	112821663	NM_207149.2	Olfr1010	NP_997032.2	ILMN_2718591	001340291	S	758	GTTCAATCCTCTTTATTTACTCCCGGCCAAGCACAAGTTATGCCCTGGAG	2	+	85594277-85594326	2qD	Mus musculus olfactory receptor 1010 (Olfr1010), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR213-1	MOR213-1
Mus musculus	RefSeq	ILMN_247554	ILMN_247554	DDX6	NM_181324.2	NM_181324.2		13209	31342194	NM_181324.2	Ddx6	NP_851841.1	ILMN_3114632	002940156	A	1744	CCACAGTGAGCCTGCAGAAGACGAGAAACCGTAACAAGCACGCTTTGACA	9	+	44443908-44443941:44443942-44443948:44444572-44444580	9qA5.2	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 (Ddx6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	mRCK/P54; HLR2; p54; rck; E230023J21Rik	mRCK/P54; HLR2; p54; rck; E230023J21Rik
Mus musculus	RefSeq	ILMN_247554	ILMN_247554	DDX6	NM_181324.2	NM_181324.2		13209	31342194	NM_181324.2	Ddx6	NP_851841.1	ILMN_3040041	004920403	I	2	AGCTTCGAGTCAACAATAAAGGACCGAGGGTGCGGAGCGGGAGTGGCCTC	9	+	44412982-44413031	9qA5.2	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 (Ddx6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	mRCK/P54; HLR2; p54; rck; E230023J21Rik	mRCK/P54; HLR2; p54; rck; E230023J21Rik
Mus musculus	RefSeq	ILMN_218217	ILMN_218217	DEFB7	NM_139220.1	NM_139220.1		246080	21361233	NM_139220.1	Defb7	NP_631966.1	ILMN_2693059	005340440	S	87	AACAGTAAACGAGCTTGCTATCGGGAAGGAGGCGAATGCCTGCAACGGTG	8	+	19497556-19497605	8qA1.3	Mus musculus defensin beta 7 (Defb7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defb15; mBD7	Defb15; mBD7
Mus musculus	RefSeq	ILMN_255897	ILMN_255897	OLFR670	NM_207146.1	NM_207146.1		384703	54261733	NM_207146.1	Olfr670	NP_997029.1	ILMN_2997653	006940097	S	848	TTGTTCCCCCAGCCCTGAATCCTGTCATCTATGGGGTGAGGACTAAGCAG	7	-	112108347-112108396	7qE3	Mus musculus olfactory receptor 670 (Olfr670), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	GA_x5J8B7W6B6J-141796-141659; MOR32-8	GA_x5J8B7W6B6J-141796-141659; MOR32-8
Mus musculus	RefSeq	ILMN_200994	ILMN_255897	OLFR670	NM_207146.1	NM_207146.1		384703	54261733	NM_207146.1	Olfr670	NP_997029.1	ILMN_2540726	003520678	S	621	GGTGCTTGCCGATGTGCTTCTAATTGCCATCTCCTATATGCGGATACTAC	7	-	112108574-112108623	7qE3	Mus musculus olfactory receptor 670 (Olfr670), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	GA_x5J8B7W6B6J-141796-141659; MOR32-8	GA_x5J8B7W6B6J-141796-141659; MOR32-8
Mus musculus	RefSeq	ILMN_242794	ILMN_242794	OLFR1349	NM_207136.1	NM_207136.1		269862	53828667	NM_207136.1	Olfr1349	NP_997019.1	ILMN_2888754	001570646	S	840	GCAAGTGGTGTCGCTGTCATACACCATGGTGACCCCTATGCTTAACCCCC	7	-	6467249-6467298	7qA1	Mus musculus olfactory receptor 1349 (Olfr1349), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR232-8	MOR232-8
Mus musculus	RefSeq	ILMN_198487	ILMN_242794	OLFR1349	NM_207136.1	NM_207136.1		269862	53828667	NM_207136.1	Olfr1349	NP_997019.1	ILMN_1252154	004250327	S	630	GGCCACCGTCCTCGTCATCATGGTTCCCTTCTGTCTCATAGCCACATCCT	7	-	6467459-6467508	7qA1	Mus musculus olfactory receptor 1349 (Olfr1349), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR232-8	MOR232-8
Mus musculus	MEEBO	ILMN_184620	ILMN_184620	1700111E14RIK	scl30204.4.1_2						1700111E14Rik		ILMN_2420146	003290040	S	18	CAGACCAGGAAAACTCAACTGAAATGGTCTAATTGAACTCAAACTCTCTC										
Mus musculus	RefSeq	ILMN_217502	ILMN_217502	MACROD1	NM_134147.3	NM_134147.3		107227	141803412	NM_134147.3	Macrod1	NP_598908.1	ILMN_2683986	003400703	S	982	ATCTGTGTGTTCCTGGAGAAGGACGAGGGCATTTACCGGGAGCGCCTTCC	19	+	7272037-7272086	19qA	Mus musculus MACRO domain containing 1 (Macrod1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			AW743046; D930010J01Rik; AI604841	AW743046; D930010J01Rik; AI604841
Mus musculus	Riken	ILMN_207121	ILMN_207121	1110037P13RIK	ri|1110037P13|ZA00011C17|AK075652|1264					AK075652	1110037P13Rik		ILMN_1223577	001090270	S	362	CCAGGCTGGCGGTACAAGCCTACAGTCTCAGCACTAAGGAACTAAACCAT										
Mus musculus	RefSeq	ILMN_216457	ILMN_216457	SBSN	NM_172205.3	NM_172205.3		282619	144953884	NM_172205.3	Sbsn	NP_757342.2	ILMN_2671302	004480615	S	1942	GCAAGATGTTCATAATGGGGTCAACCAACCCAGCAAGGAGGCCAACCAGC	7	+	31538431-31538480	7qB1	Mus musculus suprabasin (Sbsn), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110005D19Rik; AI747508	1110005D19Rik; AI747508
Mus musculus	RefSeq	ILMN_216457	ILMN_216457	SBSN	NM_172205.3	NM_172205.3		282619	144953884	NM_172205.3	Sbsn	NP_757342.2	ILMN_2744374	006280731	S	1951	TCATAATGGGGTCAACCAACCCAGCAAGGAGGCCAACCAGCTGCTGAATG	7	+	31538440-31538488:31539828-31539828	7qB1	Mus musculus suprabasin (Sbsn), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110005D19Rik; AI747508	1110005D19Rik; AI747508
Mus musculus	RefSeq	ILMN_214226	ILMN_214226	TMEM199	NM_199199.2	NM_199199.2		195040	72384366	NM_199199.2	Tmem199	NP_954669.2	ILMN_2645719	001980014	S	1195	GGCCCTCATGTTAAAAGGAGCCAAAGATGTCTGCATTGTCCTACTGTCTT	11	-	78321247-78321296	11qB5	Mus musculus transmembrane protein 199 (Tmem199), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI848469; R74819	AI848469; R74819
Mus musculus	RefSeq	ILMN_210695	ILMN_210695	CDIPT	NM_138754.3	NM_138754.3		52858	146149232	NM_138754.3	Cdipt	NP_620093.1	ILMN_1224421	001090154	S	1647	GTTCACAGGCATTGTCTCTGCCCACCTGCTTTATGTCCCTAGCTGGCCAC				7qF3	Mus musculus CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) (Cdipt), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Catalysis of the reaction: CDP-diacylglycerol + myo-inositol = CMP + phosphatidyl-1D-myo-inositol [goid 3881] [evidence IEA]	Pis; 9530042F15Rik; D7Bwg0575e; Pis1	Pis; 9530042F15Rik; D7Bwg0575e; Pis1
Mus musculus	RefSeq	ILMN_208987	ILMN_208987	HIP1R	NM_145070.2	NM_145070.2		29816	40789285	NM_145070.2	Hip1r	NP_659507.2	ILMN_2780848	004860070	S	4057	CTCAAGAGTTCTTGCTGGAGCAGCCCAGACATGGAGGGCTGGCCTTGCCT	5	+	124452900-124452949	5qF	Mus musculus huntingtin interacting protein 1 related (Hip1r), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IDA]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IDA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	AA410023; mKIAA0655	AA410023; mKIAA0655
Mus musculus	RefSeq	ILMN_213813	ILMN_213813	PLEKHJ1	NM_023900.2	NM_023900.2		78670	145966841	NM_023900.2	Plekhj1	NP_076389.2	ILMN_2641069	007160706	S	459	TACAACGAGAAAGAGTTGCAGGCGCTGTCCCGACAGCCGGCAGAGATGGC				10qC1	Mus musculus pleckstrin homology domain containing, family J member 1 (Plekhj1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9530063M10Rik	9530063M10Rik
Mus musculus	MEEBO	ILMN_215433	ILMN_215433	CXCL14	scl43911.4.1_38	NM_019568.1			9625003	NM_019568.1	Cxcl14		ILMN_2659426	003520349	S	602	AGCTGCAGAGCACCAAACGCTTCATCAAGTGGTACAATGCCTGGAACGAG						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]		
Mus musculus	Riken	ILMN_205836	ILMN_205836	A630092E18RIK	ri|A630092E18|PX00148I06|AK042443|2774					AK042443	A630092E18Rik		ILMN_1237285	002060392	S	2699	GACAAGAGACCACATTTGATTTGCAGAGTCACATAGAACTTGAACCTAGC										
Mus musculus	RefSeq	ILMN_213178	ILMN_213178	SETD4	NM_145482.2	NM_145482.2		224440	141803504	NM_145482.2	Setd4	NP_663457.1	ILMN_1242024	001010079	S	1526	CGAGAAGACAAGCTTGGGCGTGGCCCAGAAAATATGCTCTGACGTCATCG	16	-	93585437-93585486	16qC4	Mus musculus SET domain containing 4 (Setd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			ORF21; C21orf18; AY037804	ORF21; C21orf18; AY037804
Mus musculus	RefSeq	ILMN_213178	ILMN_213178	SETD4	NM_145482.2	NM_145482.2		224440	141803504	NM_145482.2	Setd4	NP_663457.1	ILMN_2670361	003120605	S	644	GCCTGAGAGCTGTCTGCTCACCACGGACACTGTGATTCGAAGCTCCCTAG	16	-	93593495-93593544	16qC4	Mus musculus SET domain containing 4 (Setd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			ORF21; C21orf18; AY037804	ORF21; C21orf18; AY037804
Mus musculus	RefSeq	ILMN_260615	ILMN_260615	KIF23	NM_024245.3	NM_024245.3		71819	29568093	NM_024245.3	Kif23	NP_077207.2	ILMN_2923463	004850079	S	2828	GTAGTCGGAAACGAAGATCGTCCACCCTAGCACCTGCCCAACCAGATGGT	9	-	61767451-61767500	9qB	Mus musculus kinesin family member 23 (Kif23), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MKLP-1; Knsl5; C87313; CHO1; 3110001D19Rik; MKLP1	MKLP-1; Knsl5; C87313; CHO1; 3110001D19Rik; MKLP1
Mus musculus	RefSeq	ILMN_199909	ILMN_199909	LOC381561	XM_355526.1	XM_355526.1			38078903	XM_355526.1	LOC381561		ILMN_2536925	003450630	S	88	CACAAGCGTATCCATGGAGTGGGCTTCAAGAAGAGTGCTCCTTGGGCACT										
Mus musculus	MEEBO	ILMN_190184	ILMN_190184	5730601F06RIK	scl36170.1.1_65				51764774	XM_486197	5730601F06Rik		ILMN_2488000	000070414	S	12	GAGGTGCTAGGATTCAAAGTGGGGGCTTTACACATGCTATAACCCAGGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219034	ILMN_219034	NDFIP2	NM_029561.3	NM_029561.3		76273	146141185	NM_029561.3	Ndfip2	NP_083837.1	ILMN_1247636	002940196	S	2218	GCAACACTATGACTAAAAAGTGCATCTAACTCTTCAGGGCTGTTTGTCCC				14qE2.3	Mus musculus Nedd4 family interacting protein 2 (Ndfip2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			9130207N19Rik; mKIAA1165; N4wbp5a; 0710001O20Rik; KIAA1165	9130207N19Rik; mKIAA1165; N4wbp5a; 0710001O20Rik; KIAA1165
Mus musculus	RefSeq	ILMN_187629	ILMN_187629	VPS26A	NM_133672.2	NM_133672.2		30930	118130955	NM_133672.2	Vps26a	NP_598433.1	ILMN_1251809	001300020	S	250	ACCTAGCCTTTAAGCAGCCTGGAAAGAGGCTAGAGCATCAAGGAATTAGA	10	-	61933829-61933878	10qB4	Mus musculus vacuolar protein sorting 26 homolog A (yeast) (Vps26a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A conserved multimeric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. For example, the budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p [goid 30904] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances into, out of or within a vacuole [goid 7034] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [evidence IDA]		AA407240; Vps26; HB58	AA407240; Vps26; HB58
Mus musculus	Riken	ILMN_203678	ILMN_203678	9530049J17RIK	ri|9530049J17|PX00113C21|AK035444|3132					AK035444	9530049J17Rik		ILMN_2559143	006040170	S	3032	CCGTGTGACTCAGTGCGAGAGTCCTTGGCTAGCACATATGAAACCCTAGC										
Mus musculus	RefSeq	ILMN_198416	ILMN_198416	LOC225924	XM_140612.2	XM_140612.2			38084909	XM_140612.2	LOC225924		ILMN_2531613	004010360	S	228	GCTGAGGCAGGTTGTGGATCATCAGATCAACAGTGGCTTCTTTTCTCCCA										
Mus musculus	MEEBO	ILMN_220776	ILMN_220776	D0H8S2298E	scl34948.8.1_23	NM_178648.1			30520010	NM_178648.1	D0H8S2298E		ILMN_2726714	006840075	S	743	AGAGAGGCTGGAAGCACCTGCTGCCCTTCCACAGGGCGGTGTTCATTCAA										
Mus musculus	MEEBO	ILMN_210380	ILMN_210380	C630028L02RIK	scl00319361.1_7	NM_176899.2			31342346	NM_176899.2	C630028L02Rik		ILMN_1223454	003440022	S	3459	GATTTTTGTTCCTTGGCTTTGGAGACATTCGACTCTCAGAAACAGTGGTC										
Mus musculus	RefSeq	ILMN_213233	ILMN_213233	KCNH2	NM_013569.1	NM_013569.1		16511	7305202	NM_013569.1	Kcnh2	NP_038597.1	ILMN_3123864	004900292	A	3850	TGGGTTCAGGGCATTACCTGACCGCTCTCCTTGGAGACCCTGGTTTGGAG	5	-	23825728-23825777	5qA3	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 2 (Kcnh2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	ERG1; AI326795; LQT; merg1b; Lqt2; M-erg; Merg1; merg1a	ERG1; AI326795; LQT; merg1b; Lqt2; M-erg; Merg1; merg1a
Mus musculus	RefSeq	ILMN_213233	ILMN_213233	KCNH2	NM_013569.1	NM_013569.1		16511	7305202	NM_013569.1	Kcnh2	NP_038597.1	ILMN_1244402	005890100	S	4051	TAACTGCCCGGAGGCACCGGCCCTGGGCCTTAGGCACCTCAAGGACTTTT	5	-	23825527-23825576	5qA3	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 2 (Kcnh2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	ERG1; AI326795; LQT; merg1b; Lqt2; M-erg; Merg1; merg1a	ERG1; AI326795; LQT; merg1b; Lqt2; M-erg; Merg1; merg1a
Mus musculus	RefSeq	ILMN_213233	ILMN_213233	KCNH2	NM_013569.1	NM_013569.1		16511	7305202	NM_013569.1	Kcnh2	NP_038597.1	ILMN_3048027	001990274	I	350	TCGCGCCGCAGAACACCTTCCTCGACACCATCATCCGCAAGTTTGAGGGC	5	-	23854357-23854359:23857026-23857072	5qA3	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 2 (Kcnh2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	ERG1; AI326795; LQT; merg1b; Lqt2; M-erg; Merg1; merg1a	ERG1; AI326795; LQT; merg1b; Lqt2; M-erg; Merg1; merg1a
Mus musculus	RefSeq	ILMN_238122	ILMN_238122	SEC14L1	NM_028777.1	NM_028777.1		74136	21311922	NM_028777.1	Sec14l1	NP_083053.1	ILMN_2953751	005870722	S	2459	TCAAAGCACACAACTGCACACTCACAGGCCCTCAGCTTCCCCGAGCCACA	11	+	116975025-116975074	11qE2	Mus musculus SEC14-like 1 (S. cerevisiae) (Sec14l1), mRNA.				1200017E04Rik; 2810012L19Rik	1200017E04Rik; 2810012L19Rik
Mus musculus	Riken	ILMN_202362	ILMN_202362	4930488F09RIK	ri|4930488F09|PX00032L08|AK015645|1309					AK015645	4930488F09Rik		ILMN_1248506	005550129	S	1237	GCTTCTGCTTCCTGAGTCCTGGGATCAAAGGTGTATGCCACCACTGCCCG										
Mus musculus	RefSeq	ILMN_191434	ILMN_322200	LOC100043177	XM_001479512.1	XM_001479512.1		100043177	149265676	XM_001479512.1	LOC100043177	XP_001479562.1	ILMN_2479018	005560091	S	251	TTTTTCTGGTATGTGCAATATCTCAACGAAGCCCCTAAACTACTCCTGCG	14	+	53464532-53464581	14qC2	PREDICTED: Mus musculus similar to OTTMUSG00000015204 protein (LOC100043177), mRNA.					
Mus musculus	RefSeq	ILMN_210050	ILMN_235447	ST5	NM_001001326.1	NM_001001326.1		76954	47679092	NM_001001326.1	St5	NP_001001326.1	ILMN_1250665	007050440	S	4019	CCCCTATCTGCCAAGCCTCTTGTTTCTGAAAGGCAAGGATCACTTCGCCC	7	-	116684685-116684734	7qE3	Mus musculus suppression of tumorigenicity 5 (St5), transcript variant 1, mRNA.				2010004M01Rik; 2610305K15Rik	2010004M01Rik; 2610305K15Rik
Mus musculus	MEEBO	ILMN_184742	ILMN_184742	SCL000460.1_17	scl000460.1_17	BC048734.1			28913542	BC048734.1	scl000460.1_17		ILMN_1259060	003850296	S	14	AGGGAGCCCACTTCCCTGCTCCGAGCTGGCCGGGAGCCCCAGGGTGTTTC										
Mus musculus	RefSeq	ILMN_200531	ILMN_200531	LOC384340	XM_357587.1	XM_357587.1			38083373	XM_357587.1	LOC384340		ILMN_1228244	004860228	S	12	GAGTGGGAAAATAAGGGCCACACTCCTGAGCACAGCATCTTGTCTGCTGC										
Mus musculus	RefSeq	ILMN_233998	ILMN_233998	C530008M07RIK	NM_001045518.1	NM_001045518.1		208994	113931643	NM_001045518.1	C530008M07Rik	NP_001038983.1	ILMN_2979494	006620392	S	150	CCAAGAGTTTCTCATCAAGGAGCGAGTTTCAGACTTTCTGGCAGAGGAAG	9	-	76393412-76393461	9qD	Mus musculus RIKEN cDNA C530008M07 gene (C530008M07Rik), mRNA.				Gm516	Gm516
Mus musculus	RefSeq	ILMN_221525	ILMN_221525	IFRD2	NM_025903.1	NM_025903.1		15983	13385395	NM_025903.1	Ifrd2	NP_080179.1	ILMN_2736762	003370435	S	1614	AATAGACAAATGTGGGAGGGTCAAGGGATCAGGACACTTAGACTCAAGCC	9	+	107450773-107450822	9qF1	Mus musculus interferon-related developmental regulator 2 (Ifrd2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810034A24Rik; AI838527; SKMc15; AA470234	1810034A24Rik; AI838527; SKMc15; AA470234
Mus musculus	RefSeq	ILMN_261310	ILMN_261310	EG625480	NM_001081564.1	NM_001081564.1		625480	125858425	NM_001081564.1	EG625480	NP_001075033.1	ILMN_2981082	004830356	S	61	ATCTGCAAGGCCTTCCAGGATATTTCTACATACTTCTCTGGTGAAGAGTG	X	+	8421180-8421188:8421643-8421683	XqA1.1	Mus musculus predicted gene, EG625480 (EG625480), mRNA.					
Mus musculus	RefSeq	ILMN_203990	ILMN_216908	VPS13A	NM_173028.3	NM_173028.3		271564	118129893	NM_173028.3	Vps13a	NP_766616.2	ILMN_2561533	004810743	S	229	AGTCCCAGCTCTCCCTGGGCATTTGGAAAGGAGCTGTGGCCCTCAAGAAC	19	-	16841010-16841030:16855160-16855188	19qB	Mus musculus vacuolar protein sorting 13A (yeast) (Vps13a), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]		D330038K10Rik; CHAC; mKIAA0986; KIAA0986; 4930516E05Rik; chorein; 9930023P20; 4930425F11	D330038K10Rik; CHAC; mKIAA0986; KIAA0986; 4930516E05Rik; chorein; 9930023P20; 4930425F11
Mus musculus	RefSeq	ILMN_205992	ILMN_216908	VPS13A	NM_173028.3	NM_173028.3		271564	118129893	NM_173028.3	Vps13a	NP_766616.2	ILMN_1244721	006040452	S	1185	GTTTGTCCCAGTTTACGGATGTGGTCGTGGGAGCATATTAGAAACCATAG	19	-	16819360-16819409	19qB	Mus musculus vacuolar protein sorting 13A (yeast) (Vps13a), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]		D330038K10Rik; CHAC; mKIAA0986; KIAA0986; 4930516E05Rik; chorein; 9930023P20; 4930425F11	D330038K10Rik; CHAC; mKIAA0986; KIAA0986; 4930516E05Rik; chorein; 9930023P20; 4930425F11
Mus musculus	RefSeq	ILMN_216908	ILMN_216908	VPS13A	NM_173028.3	NM_173028.3		271564	118129893	NM_173028.3	Vps13a	NP_766616.2	ILMN_1249537	004250382	S	9183	GCCAGCAGTACCTTTCAGGGAATCAAAAGAGCTACAGAGACTTCTGAAGT	19	-	16710349-16710370:16714480-16714507	19qB	Mus musculus vacuolar protein sorting 13A (yeast) (Vps13a), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]		D330038K10Rik; CHAC; mKIAA0986; KIAA0986; 4930516E05Rik; chorein; 9930023P20; 4930425F11	D330038K10Rik; CHAC; mKIAA0986; KIAA0986; 4930516E05Rik; chorein; 9930023P20; 4930425F11
Mus musculus	MEEBO	ILMN_190850	ILMN_190850	A630036G19RIK	scl48304.1_524						A630036G19Rik		ILMN_2473804	004390041	S	19	GGCACCAGGACAATTCCACAAAATGTAAGTTATGTCACCCACCTGAAATC										
Mus musculus	RefSeq	ILMN_198564	ILMN_246468	EG625349	XM_889916.3	XM_889916.3		625349	149256495	XM_889916.3	EG625349	XP_895009.3	ILMN_1217428	002690129	S	150	TGAGAGCTTCTTTACCTGGTTTACTGACCATCCTAACGTAGGTGCTGACG	7	-	30583952-30584001	7qB1	PREDICTED: Mus musculus predicted gene, EG625349 (EG625349), mRNA.					
Mus musculus	RefSeq	ILMN_214856	ILMN_214856	RAB38	NM_028238.5	NM_028238.5		72433	31981684	NM_028238.5	Rab38	NP_082514.4	ILMN_2806250	006330053	S	1180	TCCCGGGTGGTCTGATAGGTCTATTAAATAGAAACCATTCATGGTAGACC	7	+	88366367-88366416	7qE1	Mus musculus Rab38, member of RAS oncogene family (Rab38), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AU043391; cht; MGC107581; 2310011F14Rik	AU043391; cht; MGC107581; 2310011F14Rik
Mus musculus	RefSeq	ILMN_202692	ILMN_242836	GRM8	NM_008174.2	NM_008174.2		14823	116812903	NM_008174.2	Grm8	NP_032200.2	ILMN_1220385	002350064	S	235	AAACTTGCTGAAATCCCTAAAGCCTTCCCCCATGGGCCCTGATGGTAGCC	6	-	28076213-28076262	6qA3.1-qA3.2	Mus musculus glutamate receptor, metabotropic 8 (Grm8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A G-protein coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity [goid 1642] [evidence IDA]	A230002O04; mGluR8; Gprc1h	A230002O04; mGluR8; Gprc1h
Mus musculus	RefSeq	ILMN_189926	ILMN_242836	GRM8	NM_008174.2	NM_008174.2		14823	116812903	NM_008174.2	Grm8	NP_032200.2	ILMN_2711523	003460187	S	2915	ACGTTCAAAAACGCAAGAGAAGCTTCAAGGCTGTGGTCACGGCCGCTACC	6	-	27235819-27235868	6qA3.1-qA3.2	Mus musculus glutamate receptor, metabotropic 8 (Grm8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A G-protein coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity [goid 1642] [evidence IDA]	A230002O04; mGluR8; Gprc1h	A230002O04; mGluR8; Gprc1h
Mus musculus	RefSeq	ILMN_217478	ILMN_217478	2300002M23RIK	NM_175148.3	NM_175148.3		69542	141802083	NM_175148.3	2300002M23Rik	NP_780357.1	ILMN_2683656	003370022	S	1042	GGTAGCTGGGGAACTAAAGGTCAGAATCGGCTTCCCCCAGGAGCCAAACG	17	+	35705684-35705733	17qB1	Mus musculus RIKEN cDNA 2300002M23 gene (2300002M23Rik), mRNA.				MGC130211; MGC130212	MGC130211; MGC130212
Mus musculus	MEEBO	ILMN_212763	ILMN_212763	PLEKHK1	scl38815.22.1_11				51765664	XM_483915	Plekhk1		ILMN_1212806	000620408	S	4178	GGGCTAGGGTGAGTTTCCATCGGAATCCTCTACAGCAACCATTCGGAGTC										
Mus musculus	RefSeq	ILMN_237934	ILMN_237934	LRMP	NM_008511.2	NM_008511.2		16970	34328141	NM_008511.2	Lrmp	NP_032537.2	ILMN_2919850	005390064	S	1913	CCACACAGGAGGGGGACTCCTGGCTGTCTCTAGAACACATCTTATGGCCA	6	+	145110169-145110218	6qG3	Mus musculus lymphoid-restricted membrane protein (Lrmp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			D6Int3; D6Int7; Jaw1; AI553456; D6Int5; D6Int4; D6Int8	D6Int3; D6Int7; Jaw1; AI553456; D6Int5; D6Int4; D6Int8
Mus musculus	RefSeq	ILMN_215198	ILMN_256323	LOC236220	XM_135559.7	XM_135559.7		236220	149274915	XM_135559.7	LOC236220	XP_135559.2	ILMN_1241056	002760373	S	168	CATGGATAAAGCCAAGAAGATGATGCAGTCCATTCCCAGTTTTGTCAAGG					PREDICTED: Mus musculus hypothetical LOC236220 (LOC236220), mRNA.					
Mus musculus	MEEBO	ILMN_194065	ILMN_194065	EPB4.1L4A	scl51554.26_374				7305032	NM_013512	Epb4.1l4a		ILMN_1220939	006940142	S	2360	GGACTCTGGGCCTGCATCAGACTGGTGACTTTTATTCCCACCAAACTGTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216082	ILMN_216082	ADH4	NM_011996.2	NM_011996.2		26876	121247378	NM_011996.2	Adh4	NP_036126.2	ILMN_1258442	006840193	S	1178	GGAGCAACTTGGAATGTTATCTGATTGGATCCGAGCCTGTCTGGATGATT	3	+	138093722-138093771	3qG3	Mus musculus alcohol dehydrogenase 4 (class II), pi polypeptide (Adh4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom [goid 46164] [evidence IDA]; The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IDA]; The chemical reactions and pathways involving quinone cofactors [goid 42375] [evidence IDA]; The chemical reactions and pathways involving ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation [goid 6067] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ requiring the presence of zinc [goid 4024] [evidence IDA]; Catalysis of the reaction: NADPH + H+ + quinone = NADP+ + semiquinone [goid 3960] [evidence IDA]; Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+ [goid 4032] [evidence IDA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]	Adh2	Adh2
Mus musculus	RefSeq	ILMN_198360	ILMN_198360	LOC232044	XM_144766.3	XM_144766.3			38084289	XM_144766.3	LOC232044		ILMN_2531411	005570273	S	318	CTTGGTTTTCCACAGCTTTGGTCCCCTCAGATTTGATGGAGCCCTGGATG										
Mus musculus	RefSeq	ILMN_211420	ILMN_323148	LOC100046932	XM_001477097.1	XM_001477097.1		100046932	149250525	XM_001477097.1	LOC100046932	XP_001477147.1	ILMN_2615714	005270010	S	3423	CACAGTTACTTGTTAATATGTAAATATTTTACTTTCAGAAATGAAGTTTT					PREDICTED: Mus musculus similar to TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor (LOC100046932), mRNA.					
Mus musculus	RefSeq	ILMN_208896	ILMN_208896	OLFR13	NM_146652.1	NM_146652.1		18310	22203790	NM_146652.1	Olfr13	NP_666863.1	ILMN_2949342	003290646	S	762	CATTGTCATGTACGTTGGACCCAGACACGGGAGCCCAAAGGAGCAGAAGA	6	+	43124748-43124797	6qB2.1	Mus musculus olfactory receptor 13 (Olfr13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	K7; MOR261-6	K7; MOR261-6
Mus musculus	RefSeq	ILMN_226183	ILMN_226183	EG433365	NM_001008426.1	NM_001008426.1		433365	56606032	NM_001008426.1	EG433365	NP_001008426.1	ILMN_2962539	004210066	S	2405	ATAGCTTATGCTCAATAAGGTTTACTTCCGGGGCCCCCCTTTTCTTTCCC	1	+	155638967-155639016	1qG3	Mus musculus predicted gene, EG433365 (EG433365), mRNA.					
Mus musculus	RefSeq	ILMN_213026	ILMN_213026	CTSZ	NM_022325.3	NM_022325.3		64138	46849762	NM_022325.3	Ctsz	NP_071720.1	ILMN_2839569	003450091	S	1137	GCATCCCGAGAGGAGACGGTAAAGGATGAAACACAACTGCACTGGGACCC	2	-	174070639-174070688	2qH4	Mus musculus cathepsin Z (Ctsz), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	AI787083; AU019819; CTSX; D2Wsu143e	AI787083; AU019819; CTSX; D2Wsu143e
Mus musculus	RefSeq	ILMN_218136	ILMN_218136	CLEC2I	NM_020257.1	NM_020257.1		93675	9933349	NM_020257.1	Clec2i	NP_064653.1	ILMN_1252488	001090441	S	618	GTGGATCTGTAGCAAGCTCAACAACTATAACCTCCATTGCCAAACTCCTC	6	+	128846511-128846560	6qF3	Mus musculus C-type lectin domain family 2, member i (Clec2i), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that modulates the frequency, rate or extent of T cell proliferation [goid 42129] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45076] [evidence IMP]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IMP]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISS]; Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]	Dcl1; Clrg; LCL-1; OCILrP2; Clr-g	Dcl1; Clrg; LCL-1; OCILrP2; Clr-g
Mus musculus	RefSeq	ILMN_209077	ILMN_209077	ILTIFB	NM_054079.1	NM_054079.1		116849	21426818	NM_054079.1	Iltifb	NP_473420.1	ILMN_2717822	003170291	S	860	TGTTTGAAAGGAGGTTACCTCTCATTCCTCTAGAAGAAAAGCCTATGTAA	10	-	117726886-117726935	10qD2	Mus musculus interleukin 10-related T cell-derived inducible factor beta (Iltifb), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	MGC129417; MGC129416; IL-TIFb	MGC129417; MGC129416; IL-TIFb
Mus musculus	RefSeq	ILMN_209077	ILMN_209077	ILTIFB	NM_054079.1	NM_054079.1		116849	21426818	NM_054079.1	Iltifb	NP_473420.1	ILMN_2592303	000270189	S	1014	TCTGATGTTGATATTTGAGTATAAAGCAAATAATATTTATGATAATAACT	10	-	117726732-117726781	10qD2	Mus musculus interleukin 10-related T cell-derived inducible factor beta (Iltifb), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	MGC129417; MGC129416; IL-TIFb	MGC129417; MGC129416; IL-TIFb
Mus musculus	RefSeq	ILMN_217294	ILMN_234660	EIF5	NM_178041.1	NM_178041.1		217869	124430540	NM_178041.1	Eif5	NP_829887.1	ILMN_1240466	003830315	S	1386	CTCCAAGATCCCACACATCCTGAAGGAGATGTATGATGCCGACCTGTTAG	12	+	112781394-112781443	12qF1	Mus musculus eukaryotic translation initiation factor 5 (Eif5), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D12Ertd549e; MGC36509; MGC36374; 2810011H21Rik	D12Ertd549e; MGC36509; MGC36374; 2810011H21Rik
Mus musculus	RefSeq	ILMN_220075	ILMN_248964	EIF1AY	NM_025437.4	NM_025437.4		66235	148747222	NM_025437.4	Eif1ay	NP_079713.2	ILMN_2754346	002450402	S	238	CCGGCGTAGAGGCAAAAATGAGAATGAATCTGAAAAGCGAGAGCTTGTGT				XqF4	Mus musculus eukaryotic translation initiation factor 1A, Y-linked (Eif1ay), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AI426898; 1500010B24Rik	AI426898; 1500010B24Rik
Mus musculus	RefSeq	ILMN_195524	ILMN_195524	VAMP4	NM_016796.2	NM_016796.2		53330	31543937	NM_016796.2	Vamp4	NP_058076.2	ILMN_2516348	001230543	S	8	GCAAATGTAGTGCCACACCCCGTTTCCCGGCTTCTCAATGCCTCGTGATG	1	+	164407510-164407554:164410973-164410977	1qH2.1	Mus musculus vesicle-associated membrane protein 4 (Vamp4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D1Ertd147e	D1Ertd147e
Mus musculus	RefSeq	ILMN_221778	ILMN_231871	DYRK4	NM_207210.1	NM_207210.1		101320	46402172	NM_207210.1	Dyrk4	NP_997093.1	ILMN_2740195	007050471	S	2000	TCGTGGCAGGCGGGCATGTCCCGCTCCCTTCCGCCACCAATTTGTATTAG	6	-	126826285-126826334	6qF3	Mus musculus dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 (Dyrk4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Dyrk4a; AW049118; Dyrk4b	Dyrk4a; AW049118; Dyrk4b
Mus musculus	RefSeq	ILMN_214120	ILMN_259872	LOC675377	XR_005113.2	XR_005113.2		675377	149271950	XR_005113.2	LOC675377		ILMN_2644469	007400154	S	567	AGCCTATCTTAAAGGCTGGCCGTGCCTACCACAAGTACAAGGCAAAGAGG					PREDICTED: Mus musculus similar to Ribosomal protein L8 (LOC675377), misc RNA.					
Mus musculus	RefSeq	ILMN_213377	ILMN_213377	TCF4	NM_013685.2	NM_013685.2		21413	145386571	NM_013685.2	Tcf4	NP_038713.1	ILMN_2636463	007550360	S	3744	CAAGTGTTACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGT				18qE2	Mus musculus transcription factor 4 (Tcf4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	SEF2; ITF2; SEF-2; Tcf-4; ASP-I2; ITF-2; MITF-2B; Hnf-4; E2.2; TFE; ME2; ITF-2b; SEF2-1; MITF-2A; 5730422P05Rik; E2-2	SEF2; ITF2; SEF-2; Tcf-4; ASP-I2; ITF-2; MITF-2B; Hnf-4; E2.2; TFE; ME2; ITF-2b; SEF2-1; MITF-2A; 5730422P05Rik; E2-2
Mus musculus	RefSeq	ILMN_195475	ILMN_195475	V1RE3	NM_134192.2	NM_134192.2		171226	31982572	NM_134192.2	V1re3	NP_598953.1	ILMN_2515901	003610180	S	1229	CCTGGATAAAAATAATATAAACATAAAATGATCTTCTAATAAAACTGTAC	17	-	20913187-20913216:20913217-20913236	17qA3.2	Mus musculus vomeronasal 1 receptor, E3 (V1re3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	Vldr1	Vldr1
Mus musculus	RefSeq	ILMN_195263	ILMN_236015	LDB3	NM_001039076.2	NM_001039076.2		24131	122056490	NM_001039076.2	Ldb3	NP_001034165.1	ILMN_2513993	000840221	S	690	CCCATTGGCCTGTACTCAGCAGAGACCCTGAGGGAGATGGCTCAGATGTA	14	-	35390219-35390268	14qB	Mus musculus LIM domain binding 3 (Ldb3), transcript variant 7, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with protein kinase C [goid 5080] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271
Mus musculus	RefSeq	ILMN_199424	ILMN_236015	LDB3	NM_001039076.2	NM_001039076.2		24131	122056490	NM_001039076.2	Ldb3	NP_001034165.1	ILMN_1241773	004570554	S	1339	CACCCCCTCATGCAAACCCTTAGCTGTAGTCCAGAGAGGACATAACAGGG	14	-	35374673-35374722	14qB	Mus musculus LIM domain binding 3 (Ldb3), transcript variant 7, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with protein kinase C [goid 5080] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271
Mus musculus	MEEBO	ILMN_194349	ILMN_194349	BC024760	scl20176.14.1_113						BC024760		ILMN_2505634	001470372	S	10	TTTAGCTGTAGCCAGCGCCCCACCCCCCGCTGGCATCACTTCCACTCTCT										
Mus musculus	RefSeq	ILMN_219297	ILMN_219297	PNCK	NM_012040.2	NM_012040.2		93843	31340562	NM_012040.2	Pnck	NP_036170.1	ILMN_1244364	003140044	S	1345	CCCATGTCGCTGCCACCCTCTATGGAAACTGAGGAGGTGTTCAAAAGTGG	X	-	70902818-70902852:70902802-70902816	XqA7.3	Mus musculus pregnancy upregulated non-ubiquitously expressed CaM kinase (Pnck), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Bstk3; Punc; caMKlb1; CaMKIbeta2; Camk1b; CaMKlb2	Bstk3; Punc; caMKlb1; CaMKIbeta2; Camk1b; CaMKlb2
Mus musculus	Riken	ILMN_204137	ILMN_204137	B230311P14RIK	ri|B230311P14|PX00159K19|AK045810|2703					AK045810	B230311P14Rik		ILMN_1255176	005870379	S	2570	GAGCAGTTGATGCTCTCACAGAGGACCCAGGTCTGAGTGCCCAGCACGTA										
Mus musculus	RefSeq	ILMN_217980	ILMN_224553	4930455B06RIK	XM_904650.3	XM_904650.3		223825	149266313	XM_904650.3	4930455B06Rik	XP_909743.2	ILMN_1234768	005670019	S	722	AGATCTTCATGCTGTTCCGGTATATAATGGAGAAATGGGCCCCGCAGGCC				15qA1	PREDICTED: Mus musculus RIKEN cDNA 4930455B06 gene (4930455B06Rik), mRNA.					
Mus musculus	Riken	ILMN_205339	ILMN_205339	A630047E20RIK	ri|A630047E20|PX00145M24|AK041928|3013					AK041928	A630047E20Rik		ILMN_2571808	000060333	S	2684	TGCCAATGACAGTCAGGGTGTGTCAGTAGATAGAGGGGTGTGTGTGTGTG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence RCA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence RCA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence RCA]		
Mus musculus	RefSeq	ILMN_209601	ILMN_209601	FOXA2	NM_010446.2	NM_010446.2		15376	153945803	NM_010446.2	Foxa2	NP_034576.2	ILMN_1229325	002320446	S	21	ACCACGCGAGTCCTACGCGCCTCCTGAGGCCGCCCCGGGACTTAACTGTA				2qG3	Mus musculus forkhead box A2 (Foxa2), mRNA.	Any constituent part of a cell, the basic structural and functional unit of all organisms [goid 44464] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IGI]; The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21533] [evidence IMP]; The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21533] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed [goid 48665] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The formation of ectoderm during gastrulation [goid 1705] [evidence IGI]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed [goid 48665] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Tcf-3b; HNF3beta; Hnf3b; Tcf3b; HNF3-beta; Hnf-3b	Tcf-3b; HNF3beta; Hnf3b; Tcf3b; HNF3-beta; Hnf-3b
Mus musculus	RefSeq	ILMN_209601	ILMN_209601	FOXA2	NM_010446.2	NM_010446.2		15376	153945803	NM_010446.2	Foxa2	NP_034576.2	ILMN_1246216	000160368	S	1461	GTACTCCAGGCCTATTATGAACTCATCCTAAGAAGATGGCTTTCAGGCCC				2qG3	Mus musculus forkhead box A2 (Foxa2), mRNA.	Any constituent part of a cell, the basic structural and functional unit of all organisms [goid 44464] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IGI]; The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21533] [evidence IMP]; The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mature cells of the hindbrain. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21533] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed [goid 48665] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The formation of ectoderm during gastrulation [goid 1705] [evidence IGI]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed [goid 48665] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Tcf-3b; HNF3beta; Hnf3b; Tcf3b; HNF3-beta; Hnf-3b	Tcf-3b; HNF3beta; Hnf3b; Tcf3b; HNF3-beta; Hnf-3b
Mus musculus	MEEBO	ILMN_224191	ILMN_224191	C230004F18RIK	scl54896.7.1_12				31342679	NM_177916	C230004F18Rik		ILMN_2776288	001690484	S	568	CGGAGAGATGCCTTCATGCATGGTGTGCATTTGCCACCTAGTGACCACAC										
Mus musculus	Riken	ILMN_206767	ILMN_206767	SEC8	ri|D930040F07|PX00203K24|AK086603|2370					AK086603	Sec8		ILMN_1215362	001850465	S	1947	GGCCCAGGGTGTGTCTTCTCCGTTTACACTGATGACTCCTTTACTGTTCC										
Mus musculus	RefSeq	ILMN_220444	ILMN_220444	NOS2	NM_010927.1	NM_010927.1		18126	6754871	NM_010927.1	Nos2	NP_035057.1	ILMN_2841352	004610156	S	3635	GCTTCTGGCACTGAGTAAAGATAATGGTGAGGGGCTTGGGGAGACAGCGA	11	+	78775964-78776013	11qB5	Mus musculus nitric oxide synthase 2, inducible, macrophage (Nos2), mRNA.	The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6527] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IDA]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IMP]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]	Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with a tetrahydrobiopterin, 5,6,7,8-tetrahydrobiopterin or a derivative thereof; tetrahydrobiopterins are enzyme cofactors that carry electrons in redox reactions [goid 34617] [evidence IDA]; Interacting selectively with 2-amino-5-(carbamimidamido)pentanoic acid [goid 34618] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+ [goid 4517] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence TAS]	iNOS; Nos2a; NOS-II; Nos-2; i-NOS	iNOS; Nos2a; NOS-II; Nos-2; i-NOS
Mus musculus	RefSeq	ILMN_222220	ILMN_222220	SPATA1	NM_027617.3	NM_027617.3		70951	146141220	NM_027617.3	Spata1	NP_081893.1	ILMN_2746473	003180544	S	1832	ATTCTACTCAAAAATAAAGAAATGCTTATAATGTATGCATATAGAACTTA				3qH2	Mus musculus spermatogenesis associated 1 (Spata1), mRNA.				SP-2; AV266943; 4921536I21Rik	SP-2; AV266943; 4921536I21Rik
Mus musculus	MEEBO	ILMN_189909	ILMN_189909	ADSL	scl47722.14_501				31982252	NM_009634	Adsl		ILMN_1255090	003800564	S	1	CCCAACCTCTGTCTAGGAAGGAGCTAAAGACAATGTTGTTGTCAGGAGTG							The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: N6-(1,2-dicarboxyethyl)AMP = fumarate + AMP [goid 4018] [evidence ISA]		
Mus musculus	MEEBO	ILMN_189909	ILMN_189909	ADSL	scl47722.14_501				31982252	NM_009634	Adsl		ILMN_2597936	000650537	S	1291	ATGACCTTATAGAGCGCATCCGGGCAGATGCCTACTTCAGCCCCATCCAC							The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: N6-(1,2-dicarboxyethyl)AMP = fumarate + AMP [goid 4018] [evidence ISA]		
Mus musculus	RefSeq	ILMN_211152	ILMN_211152	TBC1D16	NM_172443.1	NM_172443.1		207592	27369588	NM_172443.1	Tbc1d16	NP_766031.1	ILMN_2878267	003870647	S	2545	CGAGGACACAAGGAAAAGCCTCTGGCCAGGGTGAAGGGAACCTTGTCATG	11	-	118963526-118963575	11qE2	Mus musculus TBC1 domain family, member 16 (Tbc1d16), mRNA.				Tcd1d16; B930087K01; BC026530	Tcd1d16; B930087K01; BC026530
Mus musculus	MEEBO	ILMN_212479	ILMN_212479	AEBP2	scl0011569.2_215	NM_009637.1			6752999	NM_009637.1	Aebp2		ILMN_2626919	006420537	S	1895	CATAGCCCCCTGGCCAAATGCATTTCTAGCAGCCTTGCGTGTAAGGAGAG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IMP]		
Mus musculus	Riken	ILMN_206055	ILMN_206055	D230048P18RIK	ri|D230048P18|PX00190A05|AK052127|2303					AK052127	D230048P18Rik		ILMN_1217032	000070093	S	2249	CAAGAACAGCCTACATTGTGAGCTCGAGTCAGCGCTACATAGTGAGACCC										
Mus musculus	RefSeq	ILMN_211561	ILMN_211561	NECAB1	NM_178617.3	NM_178617.3		69352	31982269	NM_178617.3	Necab1	NP_848732.2	ILMN_2821247	007160270	S	4650	GTGACTGGAACTATCAAATACACTTGTGTTTCAGGAAACCTGTGTAGTCC	4	-	14879597-14879646	4qA2	Mus musculus N-terminal EF-hand calcium binding protein 1 (Necab1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms [goid 17000] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	STIP-1; 1700003H21Rik; NECAB1	STIP-1; 1700003H21Rik; NECAB1
Mus musculus	RefSeq	ILMN_201588	ILMN_201588	SLC25A2	XM_111757.7	XM_111757.7		83885	149269721	XM_111757.7	Slc25a2	XP_111757.4	ILMN_2653772	001470092	S	1224	CTGGTGGTGGGATCTACAGGGTGAACCCAAGACTCTATGTACTTAATCTC	18	-	37797071-37797120	18qB3	PREDICTED: Mus musculus solute carrier family 25 (mitochondrial carrier, ornithine transporter) member 2 (Slc25a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_198497	ILMN_322703	EG232875	XM_001476882.1	XM_001476882.1		232875	149256818	XM_001476882.1	EG232875	XP_001476932.1	ILMN_2531903	005960128	S	2951	AGCCACACTCAGAGCCCTTCTCTGCCAGAAGCAAAACTCACTGGTGGGAG				7qA1	PREDICTED: Mus musculus predicted gene, EG232875 (EG232875), mRNA.					
Mus musculus	RefSeq	ILMN_212833	ILMN_212833	IL7	NM_008371.4	NM_008371.4		16196	145966896	NM_008371.4	Il7	NP_032397.1	ILMN_2630852	001110296	S	2307	TAGATATCCCACATCTCCTACGTGTCAGTCCTTTGTCCTGAGGAACTGGT				3qA1	Mus musculus interleukin 7 (Il7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; Any process that stops or reduces the activity of an enzyme [goid 43086] [evidence IDA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IDA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IGI]; The process by which a lymphoid progenitor cell becomes committed to becoming any type of T cell [goid 2360] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA];  [goid 5126] [evidence IEA]; Interacting selectively with the interleukin-7 receptor [goid 5139] [evidence IEA]	Il-7; MGC129342; hlb368; A630026I06Rik	Il-7; MGC129342; hlb368; A630026I06Rik
Mus musculus	RefSeq	ILMN_198347	ILMN_198347	LOC381180	XM_355106.1	XM_355106.1			38084139	XM_355106.1	LOC381180		ILMN_2531368	006480400	S	81	TGTAGTTCTTGCTAGCCTGGCAGGAGTTGACCCGAAGGACATTGTTGCAG										
Mus musculus	RefSeq	ILMN_218925	ILMN_218925	2010011I20RIK	NM_025912.3	NM_025912.3		67017	142353140	NM_025912.3	2010011I20Rik	NP_080188.2	ILMN_2702016	001510152	S	3372	GGTGAAGCAACTAAAGCACCGTATAAGCCAGCAAGGCGCACAGAGCTGCT	2	+	172181048-172181097	2qH3	Mus musculus RIKEN cDNA 2010011I20 gene (2010011I20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI430961; AV108736	AI430961; AV108736
Mus musculus	MEEBO	ILMN_186833	ILMN_186833	A830094I09RIK	scl47202.3_616				31343110	NM_177225	A830094I09Rik		ILMN_1236844	000830100	S	1	GCCTTAACGCTTGGCACAACCTACATTTTTGCATATGAGCCCGTACTGTT										
Mus musculus	RefSeq	ILMN_196446	ILMN_251304	COL22A1	XM_907370.3	XM_907370.3		69700	149266918	XM_907370.3	Col22a1	XP_912463.1	ILMN_1222869	003940463	S	5123	TACCAGGCCAACCTGGGGAACCTGGATACGCTAAAGATGGACTTCCAGGA				15qD3	PREDICTED: Mus musculus collagen, type XXII, alpha 1, transcript variant 3 (Col22a1), mRNA.					
Mus musculus	RefSeq	ILMN_196446	ILMN_251304	COL22A1	XM_907370.3	XM_907370.3		69700	149266918	XM_907370.3	Col22a1	XP_912463.1	ILMN_2707616	005090348	S	6034	TCAGGGCCCTCTATGAACAAGCTGGTGCTGAAGAAGAGTTCCCAGGTGTG				15qD3	PREDICTED: Mus musculus collagen, type XXII, alpha 1, transcript variant 3 (Col22a1), mRNA.					
Mus musculus	MEEBO	ILMN_192355	ILMN_192355	4933425M15RIK	scl0319217.1_312				31342302	NM_175674	4933425M15Rik		ILMN_2487349	001050048	S	10	TAAATCTATCCTTGATTATATAAAGGTATGTTATTTGACCATATTATGTA										
Mus musculus	RefSeq	ILMN_214698	ILMN_239694	AI842396	NM_213729.1	NM_213729.1		103844	47523978	NM_213729.1	AI842396	NP_998894.1	ILMN_2650902	005700196	S	775	AGAGAGGGCAACCTATCCACAGAAAGAGACTTATTCTGTCACTCCCAGAG	11	-	70503982-70504031	11qB3	Mus musculus expressed sequence AI842396 (AI842396), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Inca1	Inca1
Mus musculus	RefSeq	ILMN_200174	ILMN_200174	LOC384235	XM_357509.1	XM_357509.1			38080790	XM_357509.1	LOC384235		ILMN_2537840	000610520	S	542	CTAAGAAGCCTGAACACGGGCTGGAGCAAAGAGCAGCCATGCGAGCAGAG										
Mus musculus	RefSeq	ILMN_197329	ILMN_197329	LOC381387	XM_355350.1	XM_355350.1			38075162	XM_355350.1	LOC381387		ILMN_1236663	001580731	S	1710	CACACTGCAGACGCTCCTGATCTTGGACAATGAGGTCCAGACAAAGGCCC										
Mus musculus	RefSeq	ILMN_236430	ILMN_236430	SPRYD4	NM_025716.2	NM_025716.2		66701	118130283	NM_025716.2	Spryd4	NP_079992.1	ILMN_2892554	005910594	S	1180	GTGACAAAGGGAAAGAGACACTAGGGAGACATGTATGGCTCTGGTGCCAG	10	-	127647304-127647353	10qD3	Mus musculus SPRY domain containing 4 (Spryd4), mRNA.				AA114801; 4633402N23Rik	AA114801; 4633402N23Rik
Mus musculus	RefSeq	ILMN_196542	ILMN_236430	SPRYD4	NM_025716.2	NM_025716.2		66701	118130283	NM_025716.2	Spryd4	NP_079992.1	ILMN_1240871	005860148	S	466	GGACTATGAGGCAAAGAAGCTGAGCCTGGTGGATGTGAGTCGGATCTCTG	10	-	127648018-127648067	10qD3	Mus musculus SPRY domain containing 4 (Spryd4), mRNA.				AA114801; 4633402N23Rik	AA114801; 4633402N23Rik
Mus musculus	RefSeq	ILMN_213908	ILMN_213908	NUDT5	NM_016918.2	NM_016918.2		53893	31560435	NM_016918.2	Nudt5	NP_058614.1	ILMN_2880943	001690291	S	1282	CACCTGGTCTAGAAGGTGAGGGTACTTCTCAGGAATAGACTCAAGCTCCC	2	+	5785700-5785749	2qA1	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 5 (Nudt5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ADP-ribose + H2O = AMP + D-ribose 5-phosphate [goid 47631] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222863	ILMN_222863	BNIP3	NM_009760.4	NM_009760.4		12176	145966912	NM_009760.4	Bnip3	NP_033890.1	ILMN_2755900	002190431	S	1640	TTTACATAATTACTAGACATAGCCTATATCCCTTTCATTTGGAGCAAGAT				7qF4	Mus musculus BCL2/adenovirus E1B interacting protein 3 (Bnip3), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		Nip3	Nip3
Mus musculus	RefSeq	ILMN_214609	ILMN_214609	ARCN1	NM_145985.3	NM_145985.3		213827	54020741	NM_145985.3	Arcn1	NP_666097.2	ILMN_2649846	006280131	S	3460	ACTGGACTCTAACTTTGAAGTCTGCTGGTGATTCATGATACTGTAATAGG	9	-	44550161-44550210	9qA5.2	Mus musculus archain 1 (Arcn1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC27546; 4632432M07Rik; MGC102316	MGC27546; 4632432M07Rik; MGC102316
Mus musculus	RefSeq	ILMN_200836	ILMN_200836	LOC385390	XM_358221.1	XM_358221.1			38086450	XM_358221.1	LOC385390		ILMN_2540179	000010288	S	366	TCCAGCAACCACAGGCTATAAAGAAGAAAGATGGCACAGGCAGCCTTGGG										
Mus musculus	MEEBO	ILMN_217790	ILMN_217790	CKAP2	scl35025.5_14	XM_134100.3			38089137	XM_134100.3	Ckap2		ILMN_2687628	002630066	S	879	AACCAGTTGTGTCCGTTGTCAAAGCCGGTTCTTCTCAGGCCCCATCAAGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_260846	ILMN_260846	ZFP597	NM_001033159.2	NM_001033159.2		71063	84370271	NM_001033159.2	Zfp597	NP_001028331.2	ILMN_3160688	002120689	S	5547	TGGATTTTCACTGGTCTTAGCTCAACTGTGAATGTGTGCCTCTGATGTGC	16	-	3861577-3861626	16qA1	Mus musculus zinc finger protein 597 (Zfp597), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI666357; MGC118564; 4933407K12Rik; AI462383	AI666357; MGC118564; 4933407K12Rik; AI462383
Mus musculus	RefSeq	ILMN_199663	ILMN_251155	2310047A01RIK	XM_908180.3	XM_908180.3		71918	149265244	XM_908180.3	2310047A01Rik	XP_913273.1	ILMN_1232465	001110309	S	673	CACCTCTGCGAAAAGTGCAAGGTCCTGGGCTACTACTGTCGCCGTGTGCA				14qA3	PREDICTED: Mus musculus RIKEN cDNA 2310047A01 gene (2310047A01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216836	ILMN_251155	2310047A01RIK	XM_908180.3	XM_908180.3		71918	149265244	XM_908180.3	2310047A01Rik	XP_913273.1	ILMN_2675922	005860131	S	4268	CCTCGGGGTGGCATTCCGTTGTGTGCCTTATTCCTGGAGACTATATAAAG				14qA3	PREDICTED: Mus musculus RIKEN cDNA 2310047A01 gene (2310047A01Rik), mRNA.					
Mus musculus	MEEBO	ILMN_222748	ILMN_222748	MRGPRA6	scl0381886.2_163				45429994	NM_205821	Mrgpra6		ILMN_2754203	007400427	S	434	CTGCGGCTTCTTGGATACCAAATATGAAGATGACTATGGGTGTCTAGCAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_249468	ILMN_249468	OLFR267	NM_146920.1	NM_146920.1		258922	22129054	NM_146920.1	Olfr267	NP_667131.1	ILMN_2930689	003780519	S	544	GCCGTGCTAAAACTAGCTTGCGTGAGTTCCCTGCTCATGGACCTGGTTAT	4	-	58797999-58798048	4qB3	Mus musculus olfactory receptor 267 (Olfr267), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC157545; MOR262-1	MGC157545; MOR262-1
Mus musculus	RefSeq	ILMN_217629	ILMN_217629	NEK6	NM_021606.2	NM_021606.2		59126	31543319	NM_021606.2	Nek6	NP_067619.1	ILMN_2685668	006960309	S	3670	CGGGTCAGTAGGAGCCCAAACGCACAGTTCCAACATTACAACCACTCACT				2qB	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 6 (Nek6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	1300007C09Rik	1300007C09Rik
Mus musculus	RefSeq	ILMN_199415	ILMN_199415	OLFR328	NM_146502.1	NM_146502.1		258495	33238895	NM_146502.1	Olfr328	NP_666713.1	ILMN_1231645	004250482	S	874	GGAATAAGAATGTCACAGAGGCTATGAAGAAACTGTTGGGTGTGAGCATC	11	-	58364816-58364865	11qB1.3	Mus musculus olfactory receptor 328 (Olfr328), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC123537; MGC123536; MOR275-2; RP23-128D9.1	MGC123537; MGC123536; MOR275-2; RP23-128D9.1
Mus musculus	RefSeq	ILMN_199415	ILMN_199415	OLFR328	NM_146502.1	NM_146502.1		258495	33238895	NM_146502.1	Olfr328	NP_666713.1	ILMN_3009458	004490364	S	884	ATGTCACAGAGGCTATGAAGAAACTGTTGGGTGTGAGCATCCCACATTAG				11qB1.3	Mus musculus olfactory receptor 328 (Olfr328), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC123537; MGC123536; MOR275-2; RP23-128D9.1	MGC123537; MGC123536; MOR275-2; RP23-128D9.1
Mus musculus	RefSeq	ILMN_199415	ILMN_199415	OLFR328	NM_146502.1	NM_146502.1		258495	33238895	NM_146502.1	Olfr328	NP_666713.1	ILMN_2660934	000770280	S	878	ATAAGAATGTCACAGAGGCTATGAAGAAACTGTTGGGTGTGAGCATCCCA	11	-	58364812-58364861	11qB1.3	Mus musculus olfactory receptor 328 (Olfr328), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC123537; MGC123536; MOR275-2; RP23-128D9.1	MGC123537; MGC123536; MOR275-2; RP23-128D9.1
Mus musculus	MEEBO	ILMN_224064	ILMN_224064	CHRNA7	scl31253.11.1_34				31982868	NM_007390	Chrna7		ILMN_1246234	004070242	S	1727	CTTACACCCATCACCGGCATATCATTGTACTCGGCAGGGGCACCATGTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; Any process that modulates the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 32225] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; The type of sexual cycle seen in female mammals, with physiologic changes in the endometrium that recur at regular intervals during the reproductive years [goid 42698] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IGI]; Any process that activates, maintains or increases the frequency, rate or extent of heart contraction as a result of the baroreceptor response to decreased blood pressure [goid 1988] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine [goid 14061] [evidence IMP]; A change in the behavior of an organism as a result of an ethanol stimulus [goid 48149] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat [goid 32094] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISO]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence ISO]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 beta production [goid 32691] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [evidence IMP]; The process which controls the timing of the type of sexual cycle seen in female mammals [goid 60112] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence ISO]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IDA];  [goid 4889] [evidence ISO];  [goid 4889] [evidence IMP]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221857	ILMN_237224	1600015I10RIK	NM_001081273.1	NM_001081273.1		69761	124486896	NM_001081273.1	1600015I10Rik	NP_001074742.1	ILMN_1222284	000650022	S	2112	GCCAAAATAATCCTTGGGATCCCCCTGTGGTCTTCGAGGATTTTATTCAG	6	+	48883066-48883115	6qB2.3	Mus musculus RIKEN cDNA 1600015I10 gene (1600015I10Rik), mRNA.				AI429442	AI429442
Mus musculus	RefSeq	ILMN_210021	ILMN_229134	IGH-V15	XM_986787.1	XM_986787.1		16053	94394507	XM_986787.1	Igh-V15	XP_991881.1	ILMN_2601413	004560348	S	169	GTAAGGCAGAAGCCTGGGCATGGATTTGAATGGATTGGAGGCATACTCCC					PREDICTED: Mus musculus immunoglobulin heavy chain (V15 family) (Igh-V15), mRNA.					
Mus musculus	Riken	ILMN_203761	ILMN_203761	A130029G22RIK	ri|A130029G22|PX00122I05|AK037606|2550					AK037606	A130029G22Rik		ILMN_1218613	007160739	S	2107	CCTGAAATCCCAGAACACAAGAGGCAGAGACAGGTCCCAGGGCTTTGGCG										
Mus musculus	RefSeq	ILMN_214593	ILMN_214593	SIAH2	NM_009174.3	NM_009174.3		20439	118130495	NM_009174.3	Siah2	NP_033200.2	ILMN_1226332	000780435	S	2242	CTCACCATAGTACGGATGACTTGTTTACATATGGCTTCCCTTGGAAGCCC	3	-	58479067-58479116	3qD	Mus musculus seven in absentia 2 (Siah2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Sinh2; AA415433	Sinh2; AA415433
Mus musculus	RefSeq	ILMN_222263	ILMN_222263	PANK1	NM_023792.1	NM_023792.1		75735	12963828	NM_023792.1	Pank1	NP_076281.1	ILMN_2868013	006290411	S	2558	CACGCCGTAACAGGAGATCTAGTGATCTTTTGGATCAAGGGTTCCCTTCC	19	-	34885536-34885585	19qC1-qC2	Mus musculus pantothenate kinase 1 (Pank1), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15937] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + pantothenate = ADP + D-4'-phosphopantothenate [goid 4594] [evidence IDA]	5430426F23Rik; Pank1a; 4632412I06Rik; Pank1b; Pank; panK1beta	5430426F23Rik; Pank1a; 4632412I06Rik; Pank1b; Pank; panK1beta
Mus musculus	RefSeq	ILMN_222263	ILMN_222263	PANK1	NM_023792.1	NM_023792.1		75735	12963828	NM_023792.1	Pank1	NP_076281.1	ILMN_1249910	001340095	S	2201	AGGGCAGCAAACCCCTGTATAAATTTGGAGGGGCTCCCATAGCTGATCTG	19	-	34885893-34885942	19qC1-qC2	Mus musculus pantothenate kinase 1 (Pank1), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15937] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + pantothenate = ADP + D-4'-phosphopantothenate [goid 4594] [evidence IDA]	5430426F23Rik; Pank1a; 4632412I06Rik; Pank1b; Pank; panK1beta	5430426F23Rik; Pank1a; 4632412I06Rik; Pank1b; Pank; panK1beta
Mus musculus	MEEBO	ILMN_216294	ILMN_216294	4930565O14	scl36143.5_69				51764778	XM_489259	4930565O14		ILMN_2669484	004730022	S	1514	CCTTGGGCATGCACAAGCTCCAGTCCCAGCTCAAACTGGGGGACCTTATC										
Mus musculus	MEEBO	ILMN_211684	ILMN_211684	9330132A10RIK	scl51173.1.1_93	NM_176961.2			31342474	NM_176961.2	9330132A10Rik		ILMN_2618514	005570112	S	3434	AATCATATCTTGCTAACCTATAAATGTTAACTTCTTCCATCACTTATGAG										
Mus musculus	Riken	ILMN_202655	ILMN_202655	0610009D07RIK	ri|6030419K15|PX00056I06|AK020052|746					AK020052	0610009D07Rik		ILMN_2551266	006450369	S	256	GCGAATGTGAGTACCCCGCTTTTTGCGTGACAGGGAAGCGATGTTGTTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222852	ILMN_222852	NOB1	NM_026277.1	NM_026277.1		67619	30794453	NM_026277.1	Nob1	NP_080553.1	ILMN_2965991	007040358	S	1296	CTCTGCAAACCATCTAGACAGAAGCAGTAGGCCTGGCTTTCTCAACTGCC	8	-	110301919-110301968	8qD3	Mus musculus NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) (Nob1), mRNA. XM_001003700	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISA]	Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule [goid 30490] [evidence ISA]; The formation of the constituents of the small ribosomal subunit, their assembly, and their transport to the sites of protein synthesis [goid 42274] [evidence ISA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC144650; Nob1p; 1700021I09Rik; Psmd8bp1; MGC118441; MGC144649; ART-4	MGC144650; Nob1p; 1700021I09Rik; Psmd8bp1; MGC118441; MGC144649; ART-4
Mus musculus	RefSeq	ILMN_200829	ILMN_200829	GM1538	XM_358216.1	XM_358216.1		385380	38086417	XM_358216.1	Gm1538	XP_358216.1	ILMN_2540154	007050100	S	181	TTGAGAGTGGAGAAGGCCAGTAGGGATGAAAATACCATGAGCTACCTCAA	X	-	71406787-71406836	XqA7.3	PREDICTED: Mus musculus gene model 1538, (NCBI) (Gm1538), mRNA.					
Mus musculus	RefSeq	ILMN_218603	ILMN_218603	TACC1	NM_177089.4	NM_177089.4		320165	110681726	NM_177089.4	Tacc1	NP_796063.3	ILMN_2705497	004640672	S	1278	GCCTTGCTCGACCAGATGTCTCCTAAGCTAGATCCGAGTAAACGGAGTCA	8	-	26292519-26292568	8qA2	Mus musculus transforming, acidic coiled-coil containing protein 1 (Tacc1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle [goid 22027] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton [goid 32886] [evidence IMP]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	AA960202; B230378H13Rik; 4833447E04Rik	AA960202; B230378H13Rik; 4833447E04Rik
Mus musculus	RefSeq	ILMN_259819	ILMN_259819	FBXO40	NM_001037321.1	NM_001037321.1		207215	82617543	NM_001037321.1	Fbxo40	NP_001032398.1	ILMN_3163206	002570300	A	2467	GGAGAGCTTAGTGTCCACCTTTAGGGCCCGACCACGGGGCAGACACTTTT	16	-	36966160-36966209	16qB3	Mus musculus F-box protein 40 (Fbxo40), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC130417; KIAA1195; 9830003A13Rik; MGC130416; mKIAA1195	MGC130417; KIAA1195; 9830003A13Rik; MGC130416; mKIAA1195
Mus musculus	RefSeq	ILMN_259819	ILMN_259819	FBXO40	NM_001037321.1	NM_001037321.1		207215	82617543	NM_001037321.1	Fbxo40	NP_001032398.1	ILMN_3049851	006560110	I	1246	GCTTGCTCCCTGGCAAGATGGTGTTCTGGAAAGACTAAAAACAGCCGTGG	16	-	36969922-36969971	16qB3	Mus musculus F-box protein 40 (Fbxo40), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC130417; KIAA1195; 9830003A13Rik; MGC130416; mKIAA1195	MGC130417; KIAA1195; 9830003A13Rik; MGC130416; mKIAA1195
Mus musculus	RefSeq	ILMN_259819	ILMN_259819	FBXO40	NM_001037321.1	NM_001037321.1		207215	82617543	NM_001037321.1	Fbxo40	NP_001032398.1	ILMN_3125905	003180037	A	1996	CTATAGCCAGGAGCTGAAGACCTTTGCCATCAAACCAGAGGTTGCTCCGG	16	-	36969172-36969221	16qB3	Mus musculus F-box protein 40 (Fbxo40), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC130417; KIAA1195; 9830003A13Rik; MGC130416; mKIAA1195	MGC130417; KIAA1195; 9830003A13Rik; MGC130416; mKIAA1195
Mus musculus	RefSeq	ILMN_214633	ILMN_214633	GPKOW	NM_173747.3	NM_173747.3		209416	125991227	NM_173747.3	Gpkow	NP_776108.2	ILMN_2728189	006270427	S	2681	GGCTAGAACTGGGCTGAACTCTCTGGCCAAAATAAACAGACAAAAGGACA	X	+	7286493-7286542	XqA1.1	Mus musculus G patch domain and KOW motifs (Gpkow), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mT54; MGC159038; DXErtd697e; T54; 4432411B18; DXImx41e	mT54; MGC159038; DXErtd697e; T54; 4432411B18; DXImx41e
Mus musculus	RefSeq	ILMN_214633	ILMN_214633	GPKOW	NM_173747.3	NM_173747.3		209416	125991227	NM_173747.3	Gpkow	NP_776108.2	ILMN_1245453	002340681	S	650	CTTCAGTCAGGTAGTGAAGCCCCGAGTCAACTCTATAAGGCCGAAGGGCT	X	+	7279290-7279298:7280496-7280536	XqA1.1	Mus musculus G patch domain and KOW motifs (Gpkow), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mT54; MGC159038; DXErtd697e; T54; 4432411B18; DXImx41e	mT54; MGC159038; DXErtd697e; T54; 4432411B18; DXImx41e
Mus musculus	RefSeq	ILMN_211159	ILMN_211159	PLD4	NM_178911.4	NM_178911.4		104759	146198804	NM_178911.4	Pld4	NP_849242.1	ILMN_1234223	005720255	S	1710	GCAAAGGATCACCACTGAGGGCCCGAGATTGTCATCAGACAAACAGCTTC				12qF1	Mus musculus phospholipase D family, member 4 (Pld4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [evidence IEA]	AI132321	AI132321
Mus musculus	RefSeq	ILMN_199060	ILMN_199060	LOC380652	XM_354559.1	XM_354559.1			38090675	XM_354559.1	LOC380652		ILMN_1250761	000610279	S	2	TGGCCCTACAGAGCCTTCAACCTGCCAAATATAATCCATTTTGGCCACAG										
Mus musculus	RefSeq	ILMN_220434	ILMN_220434	CDC37	NM_016742.4	NM_016742.4		12539	146134380	NM_016742.4	Cdc37	NP_058022.1	ILMN_2721966	002360112	S	2244	GGGGCTCTGGCTAGAGTTTAGTGGCAGAGCTTGGCTTAGCGTGGTTTCAG				9qA3	Mus musculus cell division cycle 37 homolog (S. cerevisiae) (Cdc37), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [evidence IDA]	p50Cdc37; p50	p50Cdc37; p50
Mus musculus	Riken	ILMN_203031	ILMN_203031	6030446N20RIK	ri|6030446N20|PX00057O15|AK031517|2654					AK031517	6030446N20Rik		ILMN_1251470	001230164	S	621	GCTGGGGTCTCCCATTACCAAGCTAGAGAGTCCCTAAGTCAGCTAGCAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_203625	ILMN_203625	C430002M09RIK	ri|C430002M09|PX00078E12|AK049384|2732					AK049384	C430002M09Rik		ILMN_1255204	002940092	S	2555	GAGATGACAGAGAGAGGAGAGCGATAAAGAATAGAGTTGGGGGGTGGGGG										
Mus musculus	RefSeq	ILMN_216722	ILMN_216722	AS3MT	NM_020577.2	NM_020577.2		57344	119392104	NM_020577.2	As3mt	NP_065602.2	ILMN_1247626	000840437	S	633	GGGAGCTCTATTTCAGTGACGTCTATGCCAGCCTTGAAGTGCCAGAAGAC	19	+	46789687-46789736	19qC3	Mus musculus arsenic (+3 oxidation state) methyltransferase (As3mt), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides [goid 46685] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides [goid 46685] [evidence ISO]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + arsenite = S-adenosyl-L-homocysteine + methylarsonate [goid 30791] [evidence ISA]; Catalysis of the reaction: S-adenosyl-L-methionine + arsenite = S-adenosyl-L-homocysteine + methylarsonate [goid 30791] [evidence ISO]	2310045H08Rik; Cyt19	2310045H08Rik; Cyt19
Mus musculus	MEEBO	ILMN_224298	ILMN_224298	KCNJ4	scl46958.2.1_83				46358361	NM_008427	Kcnj4		ILMN_1238480	004880358	S	1397	ACAATATTTCCTATCGCAGGGAATCTGCCATCTGACCTCCAGGCCCTGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219464	ILMN_219464	CDC42SE1	NM_172395.2	NM_172395.2		57912	142385820	NM_172395.2	Cdc42se1	NP_765983.1	ILMN_1259946	005090450	S	2588	TCTTTGAGCACAGTCTTCTGGTGGATACTCTCCTGCATCGAGCTACCTTC	3	+	95040162-95040211	3qF2.1	Mus musculus CDC42 small effector 1 (Cdc42se1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence ISS]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46329] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SCIP1; Cdcse1; AW558204; 1300002M12Rik; Spec1	SCIP1; Cdcse1; AW558204; 1300002M12Rik; Spec1
Mus musculus	RefSeq	ILMN_188247	ILMN_219464	CDC42SE1	NM_172395.2	NM_172395.2		57912	142385820	NM_172395.2	Cdc42se1	NP_765983.1	ILMN_2451048	001430221	S	2630	GCTCGATGCAGGAGAGTATCCACCAGAAGACTGTGCTCAAAGAAACTGAC	3	+	95040204-95040253	3qF2.1	Mus musculus CDC42 small effector 1 (Cdc42se1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence ISS]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46329] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SCIP1; Cdcse1; AW558204; 1300002M12Rik; Spec1	SCIP1; Cdcse1; AW558204; 1300002M12Rik; Spec1
Mus musculus	RefSeq	ILMN_226246	ILMN_219464	CDC42SE1	NM_172395.2	NM_172395.2		57912	142385820	NM_172395.2	Cdc42se1	NP_765983.1	ILMN_3163014	003710025	A	640	GCCCAAAAGAAATGCCACCACCAGATCCCTTCAACCAGTGACCCAAGGGC	3	+	95038214-95038263	3qF2.1	Mus musculus CDC42 small effector 1 (Cdc42se1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence ISS]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46329] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SCIP1; Cdcse1; AW558204; 1300002M12Rik; Spec1	SCIP1; Cdcse1; AW558204; 1300002M12Rik; Spec1
Mus musculus	Riken	ILMN_202119	ILMN_202119	RAB14	ri|2810475J17|ZX00067F06|AK013410|803					AK013410	Rab14		ILMN_1223774	005550685	S	643	CAGTTTGCTGAGGAAAACGGTGGGTTTGAGACTTAACACTCTCCTATGGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194539	ILMN_194539	SHPRH	scl39153.30_665				34328386	NM_172937	Shprh		ILMN_1223581	006370685	S	20	AAATATCTAGCAGGTTGTGACTAATCATCAGCTGAAAACCTCTTCCAAGG						A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210704	ILMN_226806	IFI202B	NM_011940.1	NM_011940.1		26388	6754285	NM_011940.1	Ifi202b	NP_036070.1	ILMN_2608350	001690196	S	1495	GAAAATGGAAAAGAAATGTATACCTGCTCAAATATAATACATACAACATC	1|NT_039195.1	+	79731-79780	1qH3	Mus musculus interferon activated gene 202B (Ifi202b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Ifi202; Ifi202a; Ifbip-1	Ifi202; Ifi202a; Ifbip-1
Mus musculus	MEEBO	ILMN_194121	ILMN_194121	X99300	scl0057359.1_53	NM_020613.1			10181153	NM_020613.1	X99300		ILMN_2503590	005090239	S	20	GATTGAGCTTTATGTCGAAGAAACGGTACCTAACGACGCGATCATTCCGG										
Mus musculus	RefSeq	ILMN_223048	ILMN_223048	CYCS	NM_007808.3	NM_007808.3		13063	84794559	NM_007808.3	Cycs	NP_031834.1	ILMN_3155380	000830056	A	1053	ATACCCACTCAGAAACACACATAACTGGAATTCGATTAGGAATGGCACTC	6	-	50494105-50494154	6qB2.3	Mus musculus cytochrome c, somatic (Cycs), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 42743] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223048	ILMN_223048	CYCS	NM_007808.3	NM_007808.3		13063	84794559	NM_007808.3	Cycs	NP_031834.1	ILMN_3076459	005960037	I	1446	GTGGGGGTGAAAAGGCTGGAGAAAGACCTCATCGTGACTTCAGACGTGTA	6	-	50493712-50493761	6qB2.3	Mus musculus cytochrome c, somatic (Cycs), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 42743] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IDA]		
Mus musculus	RefSeq	ILMN_204241	ILMN_227688	MAST4	XM_897011.2	XM_897011.2		328329	94395612	XM_897011.2	Mast4	XP_902104.1	ILMN_1248025	003420240	S	2070	CAGCAGCAATGCCTGATACCACCCCTGCAGCACACATGGTCGGGAAGACA	13	-	103973762-103973811	13qD1	PREDICTED: Mus musculus microtubule associated serine/threonine kinase family member 4, transcript variant 5 (Mast4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_206214	ILMN_227688	MAST4	XM_897011.2	XM_897011.2		328329	94395612	XM_897011.2	Mast4	XP_902104.1	ILMN_1214101	002690138	S	2359	CCAGCCGTGACACCCTTCATCATTGCTCAGTGTTCCAAGCAGCCTAAAGT	13	-	103973473-103973522	13qD1	PREDICTED: Mus musculus microtubule associated serine/threonine kinase family member 4, transcript variant 5 (Mast4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	Riken	ILMN_202240	ILMN_202240	4930423O20RIK	ri|4930423O20|PX00030D04|AK015192|938					AK015192	4930423O20Rik		ILMN_1233506	004210594	S	490	GGCAAATGTGAGGGCGGCTTCCCACACAACCCTAAGCAAAGCATGCATAC										
Mus musculus	MEEBO	ILMN_219289	ILMN_219289	DST	scl000858.1_1891	NM_010081.1			19745145	NM_010081.1	Dst		ILMN_1253444	003400669	S	5203	AACGCTCGGCAGATGAGTTTCGGAAGAAGATGGAGAAGCTAATGGAGTCC						Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]	The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IMP]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_219289	ILMN_219289	DST	scl000858.1_1891	NM_010081.1			19745145	NM_010081.1	Dst		ILMN_1222451	002140402	S	7691	GGCCCTTCACGTCGGTATCATTGATGTCCTCATCGCCACCAGACTCAAAG						Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IDA]	The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IMP]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212173	ILMN_240130	PIK3R4	NM_001081309.1	NM_001081309.1		75669	124486788	NM_001081309.1	Pik3r4	NP_001074778.1	ILMN_1231805	005890458	S	4562	GCTCAGGACACGAAGGACTTCTAGAGAACAAACGTGGGTTTTGAAGTGAC	9	+	105589663-105589712	9qF1	Mus musculus phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150 (Pik3r4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C85833; D9Ertd418e; C730038E05Rik; 2210010O15Rik	C85833; D9Ertd418e; C730038E05Rik; 2210010O15Rik
Mus musculus	RefSeq	ILMN_191532	ILMN_325715	LOC236604	NR_003517.1	NR_003517.1		236604	147900344	NR_003517.1	LOC236604		ILMN_1245389	001980129	S	435	AGACCTGCTCTGAATCTGCGCTCCTGGCTGCTGACCATCCTCCACTACCT				11qA1	Mus musculus phosphatidylserine decarboxylase pseudogene (LOC236604), non-coding RNA.					
Mus musculus	RefSeq	ILMN_210737	ILMN_210737	C130057D23RIK	NM_177818.2	NM_177818.2		328505	31342939	NM_177818.2	C130057D23Rik	NP_808486.1	ILMN_2972419	003850161	S	1564	AGGTATGTGGCATTGTGCCCGTGTGCCTGTTGCCAACTTGTATGGCTTTG	4	+	111655593-111655642	4qD1	Mus musculus RIKEN cDNA C130057D23 gene (C130057D23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214485	ILMN_252396	2510002D24RIK	NM_001033164.2	NM_001033164.2		72307	126432561	NM_001033164.2	2510002D24Rik	NP_001028336.1	ILMN_2648486	001090630	S	105	TACACCACTACTACGTCCACGGCAAGCGGCCGGATTGCAGGCAGTGGCTC	16	+	18825547-18825596	16qA3	Mus musculus RIKEN cDNA 2510002D24 gene (2510002D24Rik), mRNA. XM_922927				AA163535; AA409624; 2410043I01Rik; DXMgi27	AA163535; AA409624; 2410043I01Rik; DXMgi27
Mus musculus	RefSeq	ILMN_223003	ILMN_223003	CXCL4	NM_019932.2	NM_019932.2		56744	142357546	NM_019932.2	Cxcl4	NP_064316.1	ILMN_2757966	004040524	S	394	GAGTTAGGTATCAGCTGCCTAAATGTCAATTGTGTTACAAGACTCCTGGA	5	+	91202293-91202342	5qE1	Mus musculus chemokine (C-X-C motif) ligand 4 (Cxcl4), mRNA.				Pf4; Scyb4	Pf4; Scyb4
Mus musculus	RefSeq	ILMN_189346	ILMN_257452	DOCK5	NM_177780.3	NM_177780.3		68813	124358945	NM_177780.3	Dock5	NP_808448.2	ILMN_2460470	001090202	S	5809	ATCAGGCATCCTCTCTTCTGAGCCAGGCTCTCAGTGAGGCAGTCACCCTG	14	-	68374461-68374474:68374475-68374510	14qD1	Mus musculus dedicator of cytokinesis 5 (Dock5), mRNA. XM_001003634 XM_001003638 XM_001003643 XM_619261 XM_619262 XM_990099 XM_990127	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC28003; AI956923; 1110060D06Rik; E130320D18; AI666732; BC016533	MGC28003; AI956923; 1110060D06Rik; E130320D18; AI666732; BC016533
Mus musculus	RefSeq	ILMN_184891	ILMN_257452	DOCK5	NM_177780.3	NM_177780.3		68813	124358945	NM_177780.3	Dock5	NP_808448.2	ILMN_2422438	005260193	S	10025	GGGTTTCATACATGGACAGTTAGGAAGATGTGTGTTGAAGAGTTTTGTTC	14	-	68370245-68370294	14qD1	Mus musculus dedicator of cytokinesis 5 (Dock5), mRNA. XM_001003634 XM_001003638 XM_001003643 XM_619261 XM_619262 XM_990099 XM_990127	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC28003; AI956923; 1110060D06Rik; E130320D18; AI666732; BC016533	MGC28003; AI956923; 1110060D06Rik; E130320D18; AI666732; BC016533
Mus musculus	RefSeq	ILMN_213277	ILMN_213277	CNIH3	NM_028408.1	NM_028408.1		72978	13386309	NM_028408.1	Cnih3	NP_082684.1	ILMN_2809998	004480491	S	1843	CTGTGGGGACTGCCCTGAGCCACCTCTCACGTCACTTTTACGCTCTGTGT	1	+	183296432-183296481	1qH4-qH5	Mus musculus cornichon homolog 3 (Drosophila) (Cnih3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		2900075G08Rik	2900075G08Rik
Mus musculus	Riken	ILMN_202274	ILMN_202274	1700054O19RIK	ri|1700054O19|ZX00075G12|AK006789|870					AK006789	1700054O19Rik		ILMN_1259618	000070524	S	754	GCGGCTTCCCACACATGAGACAAACCCATAATTGTGGAGGTGGTGCACCC										
Mus musculus	Riken	ILMN_202498	ILMN_202498	CNOT7	ri|1810044B19|ZX00043A03|AK007767|732					AK007767	Cnot7		ILMN_1231153	002350593	S	140	CTAGCTCTATGGCGAGGAGGAGGAGGAGGAGCGCGAGCTCAGAGACCCAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large multimeric transcription factor complex that can regulate transcription positively or negatively; consists of a core complex plus additional proteins; may interact with other proteins to control initiation of transcription. In Saccharomyces the core complex comprises Ccr4p, Caf1p, Not1p, Not2p, Not3p, Not4p, and Not5p; Caf4p, Caf16p, and several less well characterized proteins [goid 30014] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_188437	ILMN_311032	4930425F17RIK	XM_001480633.1	XM_001480633.1		78107	149249646	XM_001480633.1	4930425F17Rik	XP_001480683.1	ILMN_2452671	006770040	S	635	GTACCCGCTATGTAAATATTAGACTGACTAACTGACAACACTGGTCCCCT					PREDICTED: Mus musculus RIKEN cDNA 4930425F17 gene (4930425F17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194941	ILMN_245346	F8A	NM_007978.3	NM_007978.3		14070	141801707	NM_007978.3	F8a	NP_032004.2	ILMN_2622041	000460039	S	1283	TTGGCTTTGTGTGCCTAGCAAGTTACTTAAATTAGTGCCCTCCAATTCCA	X	-	70474802-70474851	XqA7.3	Mus musculus factor 8-associated gene A (F8a), mRNA.				AI852759; DXUcsf1	AI852759; DXUcsf1
Mus musculus	RefSeq	ILMN_213344	ILMN_213344	CASP4	NM_007609.1	NM_007609.1		12363	6671681	NM_007609.1	Casp4	NP_031635.1	ILMN_1254655	004290180	S	1203	GTGATCTTGGCCAAGGATCACATTCTATTCCTGAAATTCCAGAACTAGTG	9	+	5336576-5336625	9qA1	Mus musculus caspase 4, apoptosis-related cysteine peptidase (Casp4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]	Caspl; Casp11; ich-3; Caspase-11	Caspl; Casp11; ich-3; Caspase-11
Mus musculus	RefSeq	ILMN_213344	ILMN_213344	CASP4	NM_007609.1	NM_007609.1		12363	6671681	NM_007609.1	Casp4	NP_031635.1	ILMN_2811746	004210762	S	1145	CCTGGCAACTGAGAACAAAGCAACAAGCAACTGAATCTCATTTCTTCAGC	9	+	5336083-5336094:5336095-5336099:5336535-5336567	9qA1	Mus musculus caspase 4, apoptosis-related cysteine peptidase (Casp4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]	Caspl; Casp11; ich-3; Caspase-11	Caspl; Casp11; ich-3; Caspase-11
Mus musculus	RefSeq	ILMN_213344	ILMN_213344	CASP4	NM_007609.1	NM_007609.1		12363	6671681	NM_007609.1	Casp4	NP_031635.1	ILMN_2811737	005290017	S	942	CCCCACATCACTTGTCCTACCGAGACAAAACAGGAGGCTCTTACTTCATC	9	+	5327314-5327319:5328433-5328476	9qA1	Mus musculus caspase 4, apoptosis-related cysteine peptidase (Casp4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]	Caspl; Casp11; ich-3; Caspase-11	Caspl; Casp11; ich-3; Caspase-11
Mus musculus	RefSeq	ILMN_199952	ILMN_199952	LOC384104	XM_357429.1	XM_357429.1			38079177	XM_357429.1	LOC384104		ILMN_2537068	003780682	S	299	CAGATCATAATCTTGACACATCTGATATCCAGTTCCTGGAGGATGCTGGG										
Mus musculus	MEEBO	ILMN_210851	ILMN_210851	6430709H04RIK	scl0319228.4_13				51830000	XM_484539	6430709H04Rik		ILMN_2609850	004200687	S	2981	AGGCAAATTGCATTAAATGATGTCTAAGAAGATCCCGAGGACAATCAAGC										
Mus musculus	RefSeq	ILMN_239393	ILMN_239393	BIN1	NM_009668.1	NM_009668.1		30948	6753049	NM_009668.1	Bin1	NP_033798.1	ILMN_2946466	000290242	S	2173	CCCCCAAAGATGAGGTGGTTTTCCAAAGAGCCGTCCGACCCCGTTCAGTG	18	+	32578508-32578557	18qB1	Mus musculus bridging integrator 1 (Bin1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BRAMP-2; Amphl; SH3P9; ALP-1	BRAMP-2; Amphl; SH3P9; ALP-1
Mus musculus	RefSeq	ILMN_187874	ILMN_213712	GABRG2	NM_177408.5	NM_177408.5		14406	146198542	NM_177408.5	Gabrg2	NP_803127.2	ILMN_2447867	007650039	S	2235	GTGCTTGCTAATGTTTTACCTTACTTTGACGATGTGCGTTCTCAACAGAA				11qA5	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 (Gabrg2), transcript variant 2, mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]	BB128510; AI851231; GABAA-R; Gabrg-2; gamma2	BB128510; AI851231; GABAA-R; Gabrg-2; gamma2
Mus musculus	RefSeq	ILMN_200458	ILMN_233279	LOC545396	XR_003545.1	XR_003545.1		545396	94403595	XR_003545.1	LOC545396		ILMN_1234315	004280750	S	703	TGGAGAAAGTGTGCCCAAGTTACCAACAATCCTGAGAACGATGGGTGCAT				17qA3.3	PREDICTED: Mus musculus similar to TGF beta-inducible nuclear protein 1 (L-name-related protein 42) (LNR42) (LOC545396), mRNA.					
Mus musculus	RefSeq	ILMN_228020	ILMN_228020	PMP2	NM_001030305.2	NM_001030305.2		18857	118131160	NM_001030305.2	Pmp2	NP_001025476.1	ILMN_2794342	000150280	S	522	GCATGTCCTGAATTCTCTGTAGCTGGCTTGTCTGGTTTCTTCTGCACTCG	3	-	10180643-10180692	3qA1	Mus musculus peripheral myelin protein 2 (Pmp2), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	P2; MGC117795	P2; MGC117795
Mus musculus	RefSeq	ILMN_222163	ILMN_222163	OLFR996	NM_146437.1	NM_146437.1		258429	33239183	NM_146437.1	Olfr996	NP_666648.1	ILMN_2745602	007100168	S	588	GTTGGTGCTTTTTGTCTTGGCTGGCACAGTAGGTGTGCTCAGTGGACTGA	2	+	85419985-85420034	2qD	Mus musculus olfactory receptor 996 (Olfr996), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR175-4	MOR175-4
Mus musculus	RefSeq	ILMN_223274	ILMN_223274	9530008L14RIK	NM_175417.2	NM_175417.2		109254	31341834	NM_175417.2	9530008L14Rik	NP_780626.1	ILMN_2962041	004560484	S	1927	GCAGGACTTTAGCTGGGACAAAGGCTAACTGAGGGAGCCAAGGGTGCTTC	13	-	41774585-41774634	13qA4	Mus musculus RIKEN cDNA 9530008L14 gene (9530008L14Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_244378	ILMN_244378	PLA2G4C	NM_001004762.2	NM_001004762.2		232889	142345222	NM_001004762.2	Pla2g4c	NP_001004762.1	ILMN_3160874	002120021	S	1998	GCTTTACCAGGGCCCAAGTGTCAACCTGGCCTGATGTTCTCTGCCACTCA	7	+	13944654-13944703	7qA1	Mus musculus phospholipase A2, group IVC (cytosolic, calcium-independent) (Pla2g4c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D7Ertd445e	D7Ertd445e
Mus musculus	RefSeq	ILMN_203923	ILMN_245532	MPP7	XM_919231.2	XM_919231.2		75739	94404192	XM_919231.2	Mpp7	XP_924324.2	ILMN_1215766	001990064	S	3113	AGCTGGGGTAGAAAGTGGGTGGTGAGGGGTTCATAGACCTGCTTTAGCGG				18qA1	PREDICTED: Mus musculus membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7), transcript variant 10 (Mpp7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200949	ILMN_200949	LOC385507	XM_358259.1	XM_358259.1			38087268	XM_358259.1	LOC385507		ILMN_1226168	007050730	S	1170	GGATAAGGAGAAGAAAAGTGACCCTGGTGTCCTGGATATCCAAGGTAGCT										
Mus musculus	RefSeq	ILMN_216524	ILMN_216524	TACR3	NM_021382.2	NM_021382.2		21338	45597459	NM_021382.2	Tacr3	NP_067357.1	ILMN_2860586	002850564	S	3320	TCAGGGCAGAGGCAATTGCCTGGTAGTAAATCATAGTGGATTATCACAGC	3	+	134871524-134871573	3qG3	Mus musculus tachykinin receptor 3 (Tacr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with tachykinin to initiate a change in cell activity [goid 4995] [evidence IEA]	Tac3r; Nk3r	Tac3r; Nk3r
Mus musculus	RefSeq	ILMN_215362	ILMN_315714	LOC665250	XR_033814.1	XR_033814.1		665250	149261636	XR_033814.1	LOC665250		ILMN_2744326	006100484	S	142	GACCAGCTCCTTGATGATGGCAAAACTCTGGGCGAGTGTGGCTTCACTAG	11	+	6142522-6142571	11qA1	PREDICTED: Mus musculus similar to RNA polymerase II transcription factor SIII p18 subunit (LOC665250), misc RNA.					
Mus musculus	Riken	ILMN_205589	ILMN_205589	KLF3	ri|B430304G02|PX00072G03|AK046659|3393					AK046659	Klf3		ILMN_1239381	004760553	S	2999	TGAGCTCCGTCTCTCTGGGCGTGTAGTTGGCCAGTAGATAGCACAGGGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222660	ILMN_222660	DTD1	NM_025314.1	NM_025314.1		66044	13384675	NM_025314.1	Dtd1	NP_079590.1	ILMN_2753057	005260040	S	821	AAGACCCTGGGAACCTGAATATCCCTGCAGAAAAACACCAAAGGACCATT	2	+	144459754-144459803	2qG1	Mus musculus D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae) (Dtd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of D-amino acids, the dextrorotatory isomer of amino acids [goid 19478] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	Hars2; 0610006H08Rik	Hars2; 0610006H08Rik
Mus musculus	RefSeq	ILMN_222660	ILMN_222660	DTD1	NM_025314.1	NM_025314.1		66044	13384675	NM_025314.1	Dtd1	NP_079590.1	ILMN_2753058	002690703	S	822	AGACCCTGGGAACCTGAATATCCCTGCAGAAAAACACCAAAGGACCATTT	2	+	144459755-144459804	2qG1	Mus musculus D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae) (Dtd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of D-amino acids, the dextrorotatory isomer of amino acids [goid 19478] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	Hars2; 0610006H08Rik	Hars2; 0610006H08Rik
Mus musculus	MEEBO	ILMN_191587	ILMN_191587	C630031E19	scl42567.4.1_83						C630031E19		ILMN_1248239	004780722	S	2	GCTCTTCTGCCTACTGTGTTCTTGTGGAAACCCTCCGAAGCGGTGGATGC										
Mus musculus	MEEBO	ILMN_192200	ILMN_192200	CACNA1A	scl137.7.1_16				6680819	NM_007578	Cacna1a		ILMN_2485920	002600091	S	6	GGAGCATGCCAGGGGACAGTTGATAGGAGGTTCGAGACAAGGTGCACAGG						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]	The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; The release of a neurotransmitter into the synaptic cleft, where the release step is dependent on the presence of calcium ions (Ca2+). The neurotransmitter is contained within a membrane-bounded vesicle, and is released by fusion of the vesicle with the presynaptic plasma membrane of a nerve cell [goid 48791] [evidence IMP]; The regulated release of gamm-aminobutyric acid by a cell or group of cells. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues [goid 14051] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellum to attain its fully functional state. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21590] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of acetylcholine [goid 14056] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of acetylcholine [goid 14056] [evidence IMP]; The process whereby neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21522] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 51932] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones [goid 32353] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process involved in the generation of rhythmic, synchronous synaptic inputs in a neural circuit [goid 60024] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21680] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; The process whose specific outcome is the progression of the cerebellar molecular layer nerve over time, from its formation to the mature structure. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells [goid 21679] [evidence IMP]; The process whose specific outcome is the progression of the vestibular nucleus over time, from its formation to the mature structure [goid 21750] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IGI]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; Involuntary movement caused by the application of a stimulus to an organism and a subsequent movement. The signal processing of this movement takes place in the spinal cord [goid 50883] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The chemical reactions and pathways involving amino acids containing sulfur, comprising cysteine, homocysteine, methionine and selenocysteine [goid 96] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis [goid 17158] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; The regulation of the levels, transport, and metabolism of chloride ions within a cell or between a cell and its external environment [goid 30644] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]	Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IGI]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221865	ILMN_221865	SSPN	NM_010656.2	NM_010656.2		16651	118130092	NM_010656.2	Sspn	NP_034786.1	ILMN_2741402	005820240	S	4023	GTGTGCCGCAGATATAGCGGGTTCACCTTTGTATAAGTGTGCCGCAGATA	6	+	145913360-145913409	6qG3	Mus musculus sarcospan (Sspn), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Krag	Krag
Mus musculus	RefSeq	ILMN_184853	ILMN_184853	TRIB3	NM_175093.2	NM_175093.2		228775	117553620	NM_175093.2	Trib3	NP_780302.2	ILMN_1252762	004200170	S	923	AAGCGGCTGATGTCTGGAGCCTGGGTGTGGCGCTCTTCACCATGCTGGCT	2	-	152164239-152164288	2qG3	Mus musculus tribbles homolog 3 (Drosophila) (Trib3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	Trb3; SKIP3; SINK; Ifld2; Nipk; TRB-3	Trb3; SKIP3; SINK; Ifld2; Nipk; TRB-3
Mus musculus	RefSeq	ILMN_184395	ILMN_184853	TRIB3	NM_175093.2	NM_175093.2		228775	117553620	NM_175093.2	Trib3	NP_780302.2	ILMN_1225528	004280056	S	1960	CAGGCCCACAGTCAGTTTGATGACTTTGGTCTGGTTAAGTGTGTATTTTC	2	-	152163202-152163251	2qG3	Mus musculus tribbles homolog 3 (Drosophila) (Trib3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	Trb3; SKIP3; SINK; Ifld2; Nipk; TRB-3	Trb3; SKIP3; SINK; Ifld2; Nipk; TRB-3
Mus musculus	RefSeq	ILMN_184395	ILMN_184853	TRIB3	NM_175093.2	NM_175093.2		228775	117553620	NM_175093.2	Trib3	NP_780302.2	ILMN_1244279	002370110	S	1523	TCTCCGGCCAGCCCCTGCCTTGGGCACGTTTCCTACCGGGGCTGTCTTCT	2	-	152163639-152163688	2qG3	Mus musculus tribbles homolog 3 (Drosophila) (Trib3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	Trb3; SKIP3; SINK; Ifld2; Nipk; TRB-3	Trb3; SKIP3; SINK; Ifld2; Nipk; TRB-3
Mus musculus	RefSeq	ILMN_246204	ILMN_246204	ALS2CR4	NM_001037812.1	NM_001037812.1		381259	83715981	NM_001037812.1	Als2cr4	NP_001032901.1	ILMN_3058640	005260747	I	50	TCTGCTGCGGTCCCTGGAGACGTGATGGGGAAGAAGCAGGTGGTTAGCGA	1	-	59064253-59064281:59064282-59064302	1qC1.3	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4 (Als2cr4), transcript variant 2, mRNA. XM_909142 XM_921139 XM_921149 XM_921172 XM_921181	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm972; AI853305	Gm972; AI853305
Mus musculus	RefSeq	ILMN_246204	ILMN_246204	ALS2CR4	NM_001037812.1	NM_001037812.1		381259	83715981	NM_001037812.1	Als2cr4	NP_001032901.1	ILMN_3135801	004050059	A	1121	CCGATTCTCGTGCCATGGATCATAGTGAATCTGGTGGTGGCTCTCCTGGT	1	-	59050142-59050191	1qC1.3	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4 (Als2cr4), transcript variant 2, mRNA. XM_909142 XM_921139 XM_921149 XM_921172 XM_921181	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm972; AI853305	Gm972; AI853305
Mus musculus	MEEBO	ILMN_218991	ILMN_218991	OSBPL1A	scl0064291.1_176	NM_020573.1			10181107	NM_020573.1	Osbpl1a		ILMN_2702857	000940286	S	2714	GCCACAGAGAAATTAAGCTGCACTCATGTATTGCAAGGTACTGGAGACCT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_218991	ILMN_218991	OSBPL1A	scl0064291.1_176	NM_020573.1			10181107	NM_020573.1	Osbpl1a		ILMN_2724397	000240064	S	658	CTTAGGGAGACCTTGCGGTACTGCCCTGGATCGCGCCTCACGGATCAGAT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_206470	ILMN_206470	D430005F24RIK	ri|D430005F24|PX00193D05|AK084883|3588					AK084883	D430005F24Rik		ILMN_2580315	005310470	S	3487	GTGCCTTAATCCCAACACAGCCGAATCAGGATTGCTGAAAGGTGAAGGCC										
Mus musculus	RefSeq	ILMN_201461	ILMN_225551	OTTMUSG00000010173	NM_001037926.1	NM_001037926.1		626316	85702313	NM_001037926.1	OTTMUSG00000010173	NP_001033015.1	ILMN_1233195	000130424	S	1898	ACAGGAGAGAGACCTTACAAATGTAGTGAATGTGACAAATGCTTTTCCCG	4	+	146093122-146093171	4qE1	Mus musculus predicted gene, OTTMUSG00000010173 (OTTMUSG00000010173), mRNA. XM_901804 XM_901807 XM_901809 XM_901813 XM_901815 XM_901817 XM_901820	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	OTTMUSG00000010104; MGC117846	OTTMUSG00000010104; MGC117846
Mus musculus	RefSeq	ILMN_225551	ILMN_225551	OTTMUSG00000010173	NM_001037926.1	NM_001037926.1		626316	85702313	NM_001037926.1	OTTMUSG00000010173	NP_001033015.1	ILMN_3103876	005130528	A	1733	GGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACCAAACC	4	+	146092957-146093006	4qE1	Mus musculus predicted gene, OTTMUSG00000010173 (OTTMUSG00000010173), mRNA. XM_901804 XM_901807 XM_901809 XM_901813 XM_901815 XM_901817 XM_901820	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	OTTMUSG00000010104; MGC117846	OTTMUSG00000010104; MGC117846
Mus musculus	RefSeq	ILMN_225551	ILMN_225551	OTTMUSG00000010173	NM_001037926.1	NM_001037926.1		626316	85702313	NM_001037926.1	OTTMUSG00000010173	NP_001033015.1	ILMN_3030576	005360075	I	1	AGAGGTAATCCGAGACTAGTGCCTAGTGTTTGCAGAACCTGAAAACTTCC	4	+	146064746-146064795	4qE1	Mus musculus predicted gene, OTTMUSG00000010173 (OTTMUSG00000010173), mRNA. XM_901804 XM_901807 XM_901809 XM_901813 XM_901815 XM_901817 XM_901820	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	OTTMUSG00000010104; MGC117846	OTTMUSG00000010104; MGC117846
Mus musculus	RefSeq	ILMN_186856	ILMN_244007	FOXO3	NM_019740.2	NM_019740.2		56484	118130536	NM_019740.2	Foxo3	NP_062714.1	ILMN_2690574	005360070	S	133	GCCCGAGAGTCCCCTCGTCGCGGTGCCCTGGGCTCGCGCGGAATCGTACG	10	-	41996366-41996415	10qB2	Mus musculus forkhead box O3 (Foxo3), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Increase in size of antral follicles due to cell proliferation and/or growth of the antral cavity [goid 1547] [evidence IMP]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; Increase in size of primordial follicles including proliferation and shape changes of granulosa and/or theca cells until oocyte is surrounded by one layer of cuboidal shaped granulosa cells (primary follicle) [goid 1544] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	FKHRL1; 1110048B16Rik; Foxo3; Fkhr2; 2010203A17Rik; C76856	FKHRL1; 1110048B16Rik; Foxo3; Fkhr2; 2010203A17Rik; C76856
Mus musculus	RefSeq	ILMN_189706	ILMN_232928	TAX1BP3	NM_029564.2	NM_029564.2		76281	141803240	NM_029564.2	Tax1bp3	NP_083840.1	ILMN_2686036	006560288	S	49	GACTCCGGAAAGCCCAACAGCGCTCCAGATGCTGATTGGCTAGAGACTTC	11	+	72990633-72990682	11qB4	Mus musculus Tax1 (human T-cell leukemia virus type I) binding protein 3 (Tax1bp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]	RP23-263M10.10; 1300011C24Rik; TIP-1	RP23-263M10.10; 1300011C24Rik; TIP-1
Mus musculus	RefSeq	ILMN_189706	ILMN_232928	TAX1BP3	NM_029564.2	NM_029564.2		76281	141803240	NM_029564.2	Tax1bp3	NP_083840.1	ILMN_2746086	000780634	S	1347	ACTATGGAAATGGGGCAGTATGATGGTATCCCATGTTCAACACTTGTGTC	11	+	72995478-72995527	11qB4	Mus musculus Tax1 (human T-cell leukemia virus type I) binding protein 3 (Tax1bp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]	RP23-263M10.10; 1300011C24Rik; TIP-1	RP23-263M10.10; 1300011C24Rik; TIP-1
Mus musculus	RefSeq	ILMN_189706	ILMN_232928	TAX1BP3	NM_029564.2	NM_029564.2		76281	141803240	NM_029564.2	Tax1bp3	NP_083840.1	ILMN_1217309	003170477	S	1348	CTATGGAAATGGGGCAGTATGATGGTATCCCATGTTCAACACTTGTGTCC	11	+	72995479-72995528	11qB4	Mus musculus Tax1 (human T-cell leukemia virus type I) binding protein 3 (Tax1bp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]	RP23-263M10.10; 1300011C24Rik; TIP-1	RP23-263M10.10; 1300011C24Rik; TIP-1
Mus musculus	MEEBO	ILMN_212844	ILMN_212844	APRT	scl011821.1_236	NM_009698.1			28313452	NM_009698.1	Aprt		ILMN_2630946	002480551	S	682	TGTTATCACTCATTCCTTTGGTCAGCTGATCCGCCGTGCCTGTGGACCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IGI]; The chemical reactions and pathways involving adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine [goid 46083] [evidence IC ]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IGI]; The chemical reactions and pathways involving adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine [goid 46083] [evidence IGI]; The chemical reactions and pathways involving adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine [goid 46083] [evidence IMP]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IMP]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IGI]; Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis [goid 6168] [evidence IMP]; The chemical reactions and pathways involving adenine, 6-aminopurine, one of the five main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine [goid 46083] [evidence IMP]	Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [evidence IDA]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [evidence IDA]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [evidence IMP]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [evidence IDA]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [evidence IMP]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence ISO]; Interacting selectively with adenine, a purine base [goid 2055] [evidence IDA]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [evidence IGI]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [evidence IMP]		
Mus musculus	RefSeq	ILMN_201449	ILMN_201449	LOC385187	XM_358107.1	XM_358107.1			38093935	XM_358107.1	LOC385187		ILMN_2542331	000460156	S	717	GCAGTGTGAGGCCATGTCTAAGGTTACCGTGCTCTGCAGTTGTGAGGCCA										
Mus musculus	RefSeq	ILMN_209014	ILMN_209014	QPRT	NM_133686.1	NM_133686.1		67375	19526851	NM_133686.1	Qprt	NP_598447.1	ILMN_2591754	000110240	S	923	GCCTCACGCTCGCCGGTTCTAAAGCCGAAGAAGATGCCACCAGAATGGAC	7	-	134251508-134251536:134251537-134251557	7qF3	Mus musculus quinolinate phosphoribosyltransferase (Qprt), mRNA.		The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of quinolinate, the anion of quinolinic acid, also known as 2,3-pyridinedicarboxylic acid [goid 34213] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nicotinate D-ribonucleotide + diphosphate + CO2 = pyridine-2,3-dicarboxylate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4514] [evidence ISO]	QPRTase; 2410027J01Rik; AI647766	QPRTase; 2410027J01Rik; AI647766
Mus musculus	MEEBO	ILMN_223029	ILMN_223029	CANT1	scl076025.1_51	NM_029502.1			13386407	NM_029502.1	Cant1		ILMN_2758338	005900594	S	676	TGATTGTCTTCAATGGGAAACTCTACTCCGTGGATGACCGCACAGGGGTC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of a ribonucleoside diphosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with diphosphate on its glycose moiety [goid 9191] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments [goid 16462] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]; Catalysis of the reaction: GDP + H2O = GMP + phosphate [goid 4382] [evidence ISO]; Catalysis of the reaction: UDP + H2O = UMP + phosphate [goid 45134] [evidence ISO]		
Mus musculus	RefSeq	ILMN_210775	ILMN_210775	CSL	NM_027945.1	NM_027945.1		71832	13386271	NM_027945.1	Csl	NP_082221.1	ILMN_2609064	004730307	S	1028	CGAACTAAGTACTGGGAGCTCACCTATGAAGACTGTATGGACCTGCTTGC	10	-	99188269-99188318	10qD1	Mus musculus citrate synthase like (Csl), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	1700007H16Rik	1700007H16Rik
Mus musculus	RefSeq	ILMN_210775	ILMN_210775	CSL	NM_027945.1	NM_027945.1		71832	13386271	NM_027945.1	Csl	NP_082221.1	ILMN_2968496	001820022	S	1711	ATTACTACACAGTCCTGTTCGGAGTGTCGCGGGCACTGGGCGTTCTGTCC	10	-	99187586-99187635	10qD1	Mus musculus citrate synthase like (Csl), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	1700007H16Rik	1700007H16Rik
Mus musculus	RefSeq	ILMN_222252	ILMN_222252	NUDT19	NM_033080.2	NM_033080.2		110959	94158949	NM_033080.2	Nudt19	NP_149071.2	ILMN_2746906	001440575	S	1679	CTGTGCCAGCAGGGTCCTTTGTTTCTCCATCTGAGGAGATGCGAGCAGAC	7	-	36332397-36332446	7qB2	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 19 (Nudt19), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	D7Rp2-r; D7Rp2e; RP2-r; D7Rp2-s; RP2-s; D7Rp2	D7Rp2-r; D7Rp2e; RP2-r; D7Rp2-s; RP2-s; D7Rp2
Mus musculus	RefSeq	ILMN_222252	ILMN_222252	NUDT19	NM_033080.2	NM_033080.2		110959	94158949	NM_033080.2	Nudt19	NP_149071.2	ILMN_2750402	007100435	S	894	GATTTTGTTCGGATCGCCCATCAGAAGTACCTGAGAAATGGCTGCCAATA	7	-	36336512-36336561	7qB2	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 19 (Nudt19), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	D7Rp2-r; D7Rp2e; RP2-r; D7Rp2-s; RP2-s; D7Rp2	D7Rp2-r; D7Rp2e; RP2-r; D7Rp2-s; RP2-s; D7Rp2
Mus musculus	RefSeq	ILMN_214742	ILMN_239073	RTDR1	XM_983430.1	XM_983430.1		71236	94389389	XM_983430.1	Rtdr1	XP_988524.1	ILMN_2651415	000060736	S	352	CCTGGTACGGATAAAGACCACGGAGGTTCTATACATCATGGCCACCCATT					PREDICTED: Mus musculus rhabdoid tumor deletion region gene 1, transcript variant 1 (Rtdr1), mRNA.					
Mus musculus	Riken	ILMN_202932	ILMN_202932	A330102L03RIK	ri|A330102L03|PX00063D02|AK039745|1514					AK039745	A330102L03Rik		ILMN_1253201	005490164	S	1191	TGTTCGGCAGGTAAAGGCACAAACATGGTGAGAACAAGCAGGGTGAGCCC										
Mus musculus	RefSeq	ILMN_218881	ILMN_231697	2310014H01RIK	XM_001003622.2	XM_001003622.2		76448	149268674	XM_001003622.2	2310014H01Rik	XP_001003622.1	ILMN_1252831	001400398	S	2580	CGCTTCCCTGGCGCTCCTTTGTCAGCTGCCTGATTTGTATCGTTTTTGTA	17	+	36012456-36012505	17qB1	PREDICTED: Mus musculus RIKEN cDNA 2310014H01 gene, transcript variant 3 (2310014H01Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	Riken	ILMN_202870	ILMN_202870	4930455J15RIK	ri|4930455J15|PX00031J06|AK029675|3099					AK029675	4930455J15Rik		ILMN_1221186	003990725	S	2603	GGGAGCCAAAGCCACATAGCCAAAATCCACCGCTATACCTCACTGCTGGA										
Mus musculus	RefSeq	ILMN_198964	ILMN_316865	LBA1	XM_001481067.1	XM_001481067.1		320429	149260382	XM_001481067.1	Lba1	XP_001481117.1	ILMN_2533555	006330022	S	9043	CTTTGGTGAGCTCCGCCCTAGAAGGCGTGCCCAGAAATGTGGGAAGCAGA	9	+	111296802-111296851	9qF3	PREDICTED: Mus musculus lupus brain antigen 1 (Lba1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_185445	ILMN_316865	LBA1	XM_001481067.1	XM_001481067.1		320429	149260382	XM_001481067.1	Lba1	XP_001481117.1	ILMN_2610119	002140168	S	1623	TCATTCCCCATCTCAGCTCCTGGGACCAGAGGAAGACCCAGCTTCTGAGC	9	+	111264948-111264997	9qF3	PREDICTED: Mus musculus lupus brain antigen 1 (Lba1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_185445	ILMN_316865	LBA1	XM_001481067.1	XM_001481067.1		320429	149260382	XM_001481067.1	Lba1	XP_001481117.1	ILMN_1257355	001340440	S	1354	GAAGAGGAACAAGAACTTCAGAGCGATTGACAAAATCAACAGTCACCTGG	9	+	111254666-111254715	9qF3	PREDICTED: Mus musculus lupus brain antigen 1 (Lba1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_191784	ILMN_316865	LBA1	XM_001481067.1	XM_001481067.1		320429	149260382	XM_001481067.1	Lba1	XP_001481117.1	ILMN_2482167	002340326	S	10469	ATCAGATATTGCTGTATTATCTTGTTTTTATAAAGTTATAGCATCTCTCT	9	+	111298228-111298277	9qF3	PREDICTED: Mus musculus lupus brain antigen 1 (Lba1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_202281	ILMN_202281	1110001N06RIK	ri|1110001N06|R000015C19|AK003256|1166					AK003256	1110001N06Rik		ILMN_1238713	004280025	S	885	GGGTGCCAAGATGCATGGGCTCTCTCAGATTCTGGGAAACTTTCTGCACC										
Mus musculus	RefSeq	ILMN_234588	ILMN_234588	MOXD2	NM_139296.1	NM_139296.1		194357	21314835	NM_139296.1	Moxd2	NP_647457.1	ILMN_2862344	003420438	S	1683	AGAGTCTACTGGAGGCAAGGTGGAACCTCAGGACAATACCCCGGCAGGCT	6	-	40808528-40808577	6qB1	Mus musculus monooxygenase, DBH-like 2 (Moxd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3,4-dihydroxyphenethylamine + ascorbate + O2 = noradrenaline + dehydroascorbate + H2O [goid 4500] [evidence IEA]	Dbhl1	Dbhl1
Mus musculus	Riken	ILMN_203279	ILMN_203279	9430015G10RIK	ri|9430015G10|PX00108M09|AK034620|1332					AK034620	9430015G10Rik		ILMN_1254958	003990195	S	1136	TTCCAGAAGCCAGCAAGCAGAGCCTTGTCTTCCAGGGACAGACTCCACCC										
Mus musculus	RefSeq	ILMN_201264	ILMN_201264	LOC382128	XM_356225.1	XM_356225.1			38090253	XM_356225.1	LOC382128		ILMN_2541675	004640414	S	351	GCGAAGTCAGCAGGTTTCTCATTTGGCTGAGGAGCTAAGGGCAAAATGGG										
Mus musculus	RefSeq	ILMN_211223	ILMN_211223	1200014M14RIK	NM_026173.2	NM_026173.2		67463	27229042	NM_026173.2	1200014M14Rik	NP_080449.1	ILMN_2613750	004180209	S	2141	TCCTTTGTAACTGTATGTATAGATTATTTTAATGTTATTTTTATTTAAAC	13	+	97184722-97184771	13qD1	Mus musculus RIKEN cDNA 1200014M14 gene (1200014M14Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV144706	AV144706
Mus musculus	RefSeq	ILMN_224121	ILMN_233680	TRPD52L3	NM_025741.2	NM_025741.2		66745	148287023	NM_025741.2	Trpd52l3	NP_080017.1	ILMN_2775167	005810360	S	2130	TCAGTGTAGAAGCTCTTGATAAGCTGTGAAGCCATTGATAAATCCCAGCC				19qC1	Mus musculus tumor protein D52-like 3 (Trpd52l3), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	4931412G03Rik	4931412G03Rik
Mus musculus	RefSeq	ILMN_191333	ILMN_235395	LOC674147	XM_976441.1	XM_976441.1		674147	94393684	XM_976441.1	LOC674147	XP_981535.1	ILMN_2478220	001090376	S	159	GAACTGGGTGAAGCAGGCTCCAGGAAAGGGTTTAAAGTGGATGGGCTGGA					PREDICTED: Mus musculus similar to Ig heavy chain V-I region HG3 precursor (LOC674147), mRNA.					
Mus musculus	RefSeq	ILMN_186227	ILMN_235395	LOC674147	XM_976441.1	XM_976441.1		674147	94393684	XM_976441.1	LOC674147	XP_981535.1	ILMN_2433719	002230112	S	140	CCTTCACAAACTATGGAATGAACTGGGTGAAGCAGGCTCCAGGAAAGGGT					PREDICTED: Mus musculus similar to Ig heavy chain V-I region HG3 precursor (LOC674147), mRNA.					
Mus musculus	MEEBO	ILMN_195977	ILMN_195977	LOXL1	scl35774.7_2				45598389	NM_010729	Loxl1		ILMN_1257592	000870661	S	5	CCAGTCTGGACCAGGAAGACGTGAAAAGAAAATGTCCACTTCTTTGCTCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence ISO]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + H2O2 [goid 4720] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an oxygen molecule [goid 16641] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221128	ILMN_221128	GOLPH3	NM_025673.2	NM_025673.2		66629	31542902	NM_025673.2	Golph3	NP_079949.1	ILMN_2731359	007210528	S	1570	TATACACAAACCTCAGTTGAGATGTATACTTAGCAAAATTATTTTTCAAT	15	+	12279984-12280033	15qA1	Mus musculus golgi phosphoprotein 3 (Golph3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]			4733401N08Rik; 5730410D03Rik; AW413496	4733401N08Rik; 5730410D03Rik; AW413496
Mus musculus	RefSeq	ILMN_221128	ILMN_221128	GOLPH3	NM_025673.2	NM_025673.2		66629	31542902	NM_025673.2	Golph3	NP_079949.1	ILMN_2765930	003370075	S	2557	CTATCTTTTTATCTGGAGTAATAAATAAACTATGATCTTGAAAGTGCCTG	15	+	12280971-12281020	15qA1	Mus musculus golgi phosphoprotein 3 (Golph3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]			4733401N08Rik; 5730410D03Rik; AW413496	4733401N08Rik; 5730410D03Rik; AW413496
Mus musculus	MEEBO	ILMN_223013	ILMN_223013	OLFR1312	scl18871.1.343_86				22129574	NM_146362	Olfr1312		ILMN_2758099	003360328	S	658	TTACTGTTCAGAAGCACTCTTCAAGTGGCTCCTCCAAGGCTCTGTCCACA						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_219073	ILMN_219073	MPHOSPH6	NM_026758.3	NM_026758.3		68533	146141184	NM_026758.3	Mphosph6	NP_081034.1	ILMN_2703886	004040593	S	701	GATATGTGGGCACAGGCCGCTCCCTAGATTTTTGACCTGATTCTGTGTGT				8qE1	Mus musculus M phase phosphoprotein 6 (Mphosph6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1110001M01Rik; AA536809; C86426	1110001M01Rik; AA536809; C86426
Mus musculus	RefSeq	ILMN_212097	ILMN_212097	LRSAM1	NM_199302.1	NM_199302.1		227738	40556365	NM_199302.1	Lrsam1	NP_955006.1	ILMN_2761459	006620333	S	3898	GTAGGCCCAGATCTCCCCCACCCCAGCAGCACATGAGGAAATGAGCTTTA	2	-	32780765-32780814	2qB	Mus musculus leucine rich repeat and sterile alpha motif containing 1 (Lrsam1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC56830	MGC56830
Mus musculus	RefSeq	ILMN_212097	ILMN_212097	LRSAM1	NM_199302.1	NM_199302.1		227738	40556365	NM_199302.1	Lrsam1	NP_955006.1	ILMN_2622681	001190392	S	2015	ATCTCACTGGACATGCTGAGCCGAATGAGCCCCGGAGATCTGGCTAAGGT	2	-	32784252-32784253:32785094-32785141	2qB	Mus musculus leucine rich repeat and sterile alpha motif containing 1 (Lrsam1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC56830	MGC56830
Mus musculus	RefSeq	ILMN_212097	ILMN_212097	LRSAM1	NM_199302.1	NM_199302.1		227738	40556365	NM_199302.1	Lrsam1	NP_955006.1	ILMN_2708177	001110221	S	1981	CAGAGCACTACCTGCCCCTCTTCGCCCACCACCGCATCTCACTGGACATG	2	-	32785126-32785175	2qB	Mus musculus leucine rich repeat and sterile alpha motif containing 1 (Lrsam1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC56830	MGC56830
Mus musculus	RefSeq	ILMN_212097	ILMN_212097	LRSAM1	NM_199302.1	NM_199302.1		227738	40556365	NM_199302.1	Lrsam1	NP_955006.1	ILMN_2815802	001740372	S	3574	GGCCTCAGTACATTAGTTGTCATTTGGAAGTCTGGCTCCCCAGATCTCAC	2	-	32781089-32781138	2qB	Mus musculus leucine rich repeat and sterile alpha motif containing 1 (Lrsam1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC56830	MGC56830
Mus musculus	Riken	ILMN_205675	ILMN_205675	C230096G02RIK	ri|C230096G02|PX00177G02|AK049067|3347					AK049067	C230096G02Rik		ILMN_1256727	000060176	S	3062	CATGTCTCTGTGTGTCTCTGTGAGTGTGTAAGCTCCTCTGGAACTGGAGT										
Mus musculus	RefSeq	ILMN_196512	ILMN_261742	4933401B06RIK	XM_908498.2	XM_908498.2		71011	94408055	XM_908498.2	4933401B06Rik	XP_913591.1	ILMN_2623208	001990707	S	1121	CTGTTCCCAGAGGCTTTCTGACTGCCTCCTTCTGGCAGTCTTAATGTCCC				XqD	PREDICTED: Mus musculus RIKEN cDNA 4933401B06 gene (4933401B06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219561	ILMN_219561	ACTRT2	NM_028513.2	NM_028513.2		73353	31982618	NM_028513.2	Actrt2	NP_082789.1	ILMN_1215558	007050711	S	1067	CTGGTTCTCTACGTGGATCGGGGCCTCCATTGTCACGTCTCTGAGCAGCT	4	-	154040726-154040775	4qE2	Mus musculus actin-related protein T2 (Actrt2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Arpm2; Arp-T2; 1700052K15Rik	Arpm2; Arp-T2; 1700052K15Rik
Mus musculus	MEEBO	ILMN_195093	ILMN_195093	3632431M01RIK	scl00330401.1_289				51717020	XM_132843	3632431M01Rik		ILMN_1234133	000650189	S	1	GCTTCTATCCCTATCTGGTTCAATAACCCTGTCAAGACTGTCCCACATCT										
Mus musculus	MEEBO	ILMN_196186	ILMN_196186	NKX2-4	scl18554.3.1_25				28202072	NM_023504	Nkx2-4		ILMN_1258441	000110600	S	20	GCGGAAGAACTGACTGACGGAATACGCATTCACCACGTTCCTAACCAAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_204923	ILMN_204923	C230057L10RIK	ri|C230057L10|PX00175L17|AK048771|1573					AK048771	C230057L10Rik		ILMN_1216064	004860091	S	863	GGGGACAACACCATCTCTCTCATATCCATTGGAATTCCATCATCCAAAGT										
Mus musculus	MEEBO	ILMN_189737	ILMN_189737	MJ-1000-71_759	MJ-1000-71_759						MJ-1000-71_759		ILMN_2463942	004480170	S	11	GATTGGTAGCTGATGCGAGAGTTTTAATAGATAGAGCGAGATTAGAAGCC										
Mus musculus	RefSeq	ILMN_210939	ILMN_210939	CHMP4B	NM_029362.3	NM_029362.3		75608	119672914	NM_029362.3	Chmp4b	NP_083638.1	ILMN_2776764	007330719	S	922	AGGCAGCCTCCATCGCTCAGCTCTCACCCAAAGCAGTAGCCGCACCACTG	2	+	154519835-154519884	2qH1	Mus musculus chromatin modifying protein 4B (Chmp4b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		2010012F05Rik; C76846	2010012F05Rik; C76846
Mus musculus	RefSeq	ILMN_223442	ILMN_223442	TM4SF20	NM_025453.1	NM_025453.1		66261	13384857	NM_025453.1	Tm4sf20	NP_079729.1	ILMN_3006663	003840196	S	1081	GGGGGGAGAAGTTACCAGTGGGTGACACAGGGGAGAAGCATAGGAAAGCT	1	-	82636045-82636094	1qC5	Mus musculus transmembrane 4 L six family member 20 (Tm4sf20), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			MGC143474; 1810018L02Rik	MGC143474; 1810018L02Rik
Mus musculus	Riken	ILMN_207075	ILMN_207075	B930070B21RIK	ri|B930070B21|PX00665C16|AK081026|1033					AK081026	B930070B21Rik		ILMN_1234511	006350228	S	931	GAGGACATGGATTCTATCCCCAACCCCTCTTCTGAACTCTTAGGACCCCT										
Mus musculus	RefSeq	ILMN_194922	ILMN_233786	LOC637260	XM_912889.2	XM_912889.2		637260	94377659	XM_912889.2	LOC637260	XP_917982.2	ILMN_2510884	002260504	S	219	GAGCTGCAAATCCAGTCAGAGTCTGCTCAACAGTAGAACCCGAAAGAACT					PREDICTED: Mus musculus similar to Ig kappa chain V-IV region B17 precursor (LOC637260), mRNA.					
Mus musculus	RefSeq	ILMN_220358	ILMN_220358	ATP6V1C1	NM_025494.2	NM_025494.2		66335	141803358	NM_025494.2	Atp6v1c1	NP_079770.1	ILMN_1217272	000610440	S	1403	CCTTCCCCTAGATGAATTTCTCATGTGGTCCATATCTCAACATTTGCTTT	15	+	38621554-38621603	15qB3.1	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit C1 (Atp6v1c1), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	1700025B18Rik; U13839	1700025B18Rik; U13839
Mus musculus	RefSeq	ILMN_218610	ILMN_218610	CKMT2	NM_198415.2	NM_198415.2		76722	142377379	NM_198415.2	Ckmt2	NP_940807.1	ILMN_2698052	002600630	S	1012	CGTCTGGGATACATTTTGACTTGCCCCTCGAACCTCGGAACTGGATTGCG	13	-	91997852-91997901	13qC3	Mus musculus creatine kinase, mitochondrial 2 (Ckmt2), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways involving phosphocreatine, a phosphagen of creatine present in high concentration in striated muscle which is synthesized and broken down by creatine phosphokinase to buffer ATP concentration. It acts as an immediate energy reserve for muscle [goid 6603] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + creatine = ADP + phosphocreatine [goid 4111] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2300008A19Rik; ScCKmit	2300008A19Rik; ScCKmit
Mus musculus	RefSeq	ILMN_209354	ILMN_209354	YOD1	NM_178691.2	NM_178691.2		226418	31341170	NM_178691.2	Yod1	NP_848806.1	ILMN_2886947	004920112	S	3596	GAGAACTGGTTTGAGAGTAGTGTTTTTGTTGTGAAACATTCCAGGTGAAG	1	+	132549372-132549421	1qE4	Mus musculus YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae) (Yod1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	Hshin7; 9930028C20Rik	Hshin7; 9930028C20Rik
Mus musculus	RefSeq	ILMN_211122	ILMN_211122	COQ5	NM_026504.1	NM_026504.1		52064	13385991	NM_026504.1	Coq5	NP_080780.1	ILMN_2808355	003140670	S	1707	AGAATCACAAAAGTGCCATCTCAGCACTGCCACTGCTGAGCCAAGCCCGC	5	+	115557677-115557726	5qF	Mus musculus coenzyme Q5 homolog, methyltransferase (yeast) (Coq5), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	1810014G04Rik; D5Ertd33e	1810014G04Rik; D5Ertd33e
Mus musculus	RefSeq	ILMN_186918	ILMN_256180	GTF2H2	NM_022011.3	NM_022011.3		23894	142381243	NM_022011.3	Gtf2h2	NP_071294.2	ILMN_1252745	003120431	S	1284	CTCCATTGTTGTCCTGGCTGTATTCATAAGATCCCAACTCCTTCAGGTAT	13	-	101238863-101238912	13qD1	Mus musculus general transcription factor II H, polypeptide 2 (Gtf2h2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	p44; 44kDa; Btf2p44	p44; 44kDa; Btf2p44
Mus musculus	RefSeq	ILMN_222619	ILMN_222619	OLFR786	NM_146549.1	NM_146549.1		258542	27544962	NM_146549.1	Olfr786	NP_666760.1	ILMN_1217738	001500136	S	585	GATGGGGTTTTCTTGTGCTGTCTTTACCCTAATGTTCACTTTGGCATTAG	10	+	128874454-128874503	10qD3	Mus musculus olfactory receptor 786 (Olfr786), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR111-5	MOR111-5
Mus musculus	Riken	ILMN_202436	ILMN_202436	5430426E14RIK	ri|5430426E14|PX00022M10|AK017344|2998					AK017344	5430426E14Rik		ILMN_1233194	005810689	S	2750	CTACTGATGAGCACTCCAGGCTTTGAGAGGAGCATTTCTGTACAAGGTCC										
Mus musculus	RefSeq	ILMN_223440	ILMN_223440	4921520G13RIK	NM_025732.3	NM_025732.3		66729	146134884	NM_025732.3	4921520G13Rik	NP_080008.1	ILMN_1218097	004880561	S	1422	TGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCTTAATCCCTC				5qG2	Mus musculus RIKEN cDNA 4921520G13 gene (4921520G13Rik), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	Riken	ILMN_205536	ILMN_205536	D130061E05RIK	ri|D130061E05|PX00185I21|AK051635|2531					AK051635	D130061E05Rik		ILMN_2573307	002970239	S	2105	TGAGTCATGGCATCCTGTCCTGACCTTTCTGAGGGTCATGCCAAGGGCCC										
Mus musculus	RefSeq	ILMN_205164	ILMN_332183	LOC100047726	XR_033869.1	XR_033869.1		100047726	149263113	XR_033869.1	LOC100047726		ILMN_2570471	007650494	S	3640	GCCTATTGGGGGATCAACACCTTTCTCCGTCGCTATATTACAGGTAGCCA					PREDICTED: Mus musculus similar to brain factor-1 (LOC100047726), misc RNA.					
Mus musculus	MEEBO	ILMN_209500	ILMN_209500	GRASP	scl056149.9_314	NM_019518.2			31980945	NM_019518.2	Grasp		ILMN_2596396	003840040	S	1929	GGCAGCCTGGACTGTTCCACCGTTTTCTGCATATGTTGCTTCTGAACCAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence ISO]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IPI]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_206273	ILMN_206273	D030073C20RIK	ri|D030073C20|PX00181N22|AK083733|2335					AK083733	D030073C20Rik		ILMN_1245413	005900164	S	2283	GAACTTACGAAGGCAACTGGGGAGATAACTCAGCAGTTAAGAGCAGTGGC										
Mus musculus	RefSeq	ILMN_191474	ILMN_191474	TM4SF4	NM_145539.1	NM_145539.1		229302	21704061	NM_145539.1	Tm4sf4	NP_663514.1	ILMN_2479370	002260615	S	20	GGTCCTAAATGCTTCATGGCCAATGGTACATGGGGATACCCCTTCCACGA	3	+	57229400-57229449	3qD	Mus musculus transmembrane 4 superfamily member 4 (Tm4sf4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC19127; ILTMP; il-TMP	MGC19127; ILTMP; il-TMP
Mus musculus	RefSeq	ILMN_191474	ILMN_191474	TM4SF4	NM_145539.1	NM_145539.1		229302	21704061	NM_145539.1	Tm4sf4	NP_663514.1	ILMN_2901387	006180041	S	895	GATCCTTTTCTCTTTCCAAACAGCTTTGCACAATCTAGAAATTCGGTGGG	3	+	57245143-57245192	3qD	Mus musculus transmembrane 4 superfamily member 4 (Tm4sf4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC19127; ILTMP; il-TMP	MGC19127; ILTMP; il-TMP
Mus musculus	RefSeq	ILMN_220465	ILMN_220465	AU042651	NM_177809.3	NM_177809.3		328258	142384287	NM_177809.3	AU042651	NP_808477.1	ILMN_1226463	006290400	S	1158	AGCGCAGCTGTCTTCCTGCCTAATGGCCCAGAACCATGTCCGCGTCACGT	13	+	56573384-56573433	13qB1	Mus musculus expressed sequence AU042651 (AU042651), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	E230025K15; MGC130189; MGC130190	E230025K15; MGC130189; MGC130190
Mus musculus	RefSeq	ILMN_193564	ILMN_254798	PRKCBP1	NM_027230.3	NM_027230.3		228880	91064877	NM_027230.3	Prkcbp1	NP_081506.3	ILMN_2627205	007400408	S	3804	GGGAGTCTCGGCTAGATGCCTTCTGGGACTAGGGGTGCATTGTGAGCCAG	2	-	165611071-165611089:165611090-165611120	2qH3	Mus musculus protein kinase C binding protein 1 (Prkcbp1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RACK7; MGC25852; 2010005I16Rik; AL024039; mKIAA1125; ZMYND8; AI316811; 3632413B07Rik; 1110013E22Rik	RACK7; MGC25852; 2010005I16Rik; AL024039; mKIAA1125; ZMYND8; AI316811; 3632413B07Rik; 1110013E22Rik
Mus musculus	RefSeq	ILMN_193564	ILMN_254798	PRKCBP1	NM_027230.3	NM_027230.3		228880	91064877	NM_027230.3	Prkcbp1	NP_081506.3	ILMN_2668849	002570192	S	3846	TGAGCCAGAACACCTCCCTATAGGCGGGAGAAACAGCCCAAACCACAGGA	2	-	165611029-165611078	2qH3	Mus musculus protein kinase C binding protein 1 (Prkcbp1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RACK7; MGC25852; 2010005I16Rik; AL024039; mKIAA1125; ZMYND8; AI316811; 3632413B07Rik; 1110013E22Rik	RACK7; MGC25852; 2010005I16Rik; AL024039; mKIAA1125; ZMYND8; AI316811; 3632413B07Rik; 1110013E22Rik
Mus musculus	RefSeq	ILMN_193564	ILMN_254798	PRKCBP1	NM_027230.3	NM_027230.3		228880	91064877	NM_027230.3	Prkcbp1	NP_081506.3	ILMN_2498357	001510435	S	5017	GATAAGAGAATGCCAAGCTGCGCGTTGTTCAGGCAGTTTACCCCTACTAG	2	-	165609858-165609907	2qH3	Mus musculus protein kinase C binding protein 1 (Prkcbp1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RACK7; MGC25852; 2010005I16Rik; AL024039; mKIAA1125; ZMYND8; AI316811; 3632413B07Rik; 1110013E22Rik	RACK7; MGC25852; 2010005I16Rik; AL024039; mKIAA1125; ZMYND8; AI316811; 3632413B07Rik; 1110013E22Rik
Mus musculus	RefSeq	ILMN_209026	ILMN_209026	GLT28D2	NM_177130.1	NM_177130.1		320302	28893088	NM_177130.1	Glt28d2	NP_796104.1	ILMN_2591853	001450470	S	2246	GATGGGGACAGGGATAAGGGAAGTTAGGTAGCATGGCGGGGCTGCACTTG	3	-	85956089-85956138	3qF1	Mus musculus glycosyltransferase 28 domain containing 2 (Glt28d2), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	4732486J07Rik; GLT28D1L; MGC148218	4732486J07Rik; GLT28D1L; MGC148218
Mus musculus	RefSeq	ILMN_211687	ILMN_211687	AB112350	NM_178728.3	NM_178728.3		242864	31560831	NM_178728.3	AB112350	NP_848843.1	ILMN_2902492	000290703	S	3230	CCACCGGGTACCGCTGCAGCCACTGTGTTACTGTAAGCCACACTGAAACT	5	-	21175120-21175169	5qA3	Mus musculus cDNA sequence AB112350 (AB112350), mRNA.				NAPE-PLD; Mbldc1; A530089G06	NAPE-PLD; Mbldc1; A530089G06
Mus musculus	RefSeq	ILMN_207494	ILMN_207494	4930553M18RIK	XM_134645.1	XM_134645.1			20883719	XM_134645.1	4930553M18Rik		ILMN_2587852	006250048	I	993	TTAGTAAAGCTTTTTTCGTTGCTTGATTTCAGAGTAAGAAATACTATAAG										
Mus musculus	RefSeq	ILMN_214308	ILMN_214308	3110056O03RIK	NM_175195.3	NM_175195.3		73218	116805337	NM_175195.3	3110056O03Rik	NP_780404.2	ILMN_1259299	005390168	S	2754	ATTGGGTGTCCAAGCAGTCCTTTCACCTCTTGGGTAGTCGGAGGTGCTCC	10	+	80331338-80331387	10qC1	Mus musculus RIKEN cDNA 3110056O03 gene (3110056O03Rik), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	PSL1; Sppl2b; AW550292	PSL1; Sppl2b; AW550292
Mus musculus	RefSeq	ILMN_212023	ILMN_212023	SAR1A	NM_009120.2	NM_009120.2		20224	118130548	NM_009120.2	Sar1a	NP_033146.1	ILMN_2790636	001030703	S	2282	TCGGTAGCAACCTAGAAGACTGGACTCTGCCCAGGGTGGCTCTTTGTGAA	10	+	61155725-61155774	10qB4	Mus musculus SAR1 gene homolog A (S. cerevisiae) (Sar1a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Sara; 1600019H17Rik; Sara1	Sara; 1600019H17Rik; Sara1
Mus musculus	RefSeq	ILMN_216877	ILMN_216877	PON1	NM_011134.2	NM_011134.2		18979	142352560	NM_011134.2	Pon1	NP_035264.1	ILMN_2676379	004390398	S	1196	GCCATACTGTAAGGTGCCTACCACAGTGATCTCTGCTAACTAATGAATGC	6	-	5118235-5118284	6qA1	Mus musculus paraoxonase 1 (Pon1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]	Catalysis of the reaction: a phenyl acetate + H2O = a phenol + acetate [goid 4064] [evidence IMP]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: aryl dialkyl phosphate + H2O = dialkyl phosphate + an aryl alcohol [goid 4063] [evidence IEA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence TAS]	Pon	Pon
Mus musculus	RefSeq	ILMN_198837	ILMN_198837	LOC269990	XM_195668.2	XM_195668.2			38088772	XM_195668.2	LOC269990		ILMN_2533099	004900113	S	225	GACCACCAAACTGAACGGCAATCTGGAAACCAATGCTCTGGTGCTTGGCT										
Mus musculus	MEEBO	ILMN_184450	ILMN_184450	2600006L11RIK	scl36836.2.1_8						2600006L11Rik		ILMN_2418737	001240603	S	7	ACAGAAGCCCCTTTGCCTTTCCAGCGCAGGAGAGCCTCAGGCTCCTGCTC										
Mus musculus	RefSeq	ILMN_187378	ILMN_262022	RFXAP	NM_133231.2	NM_133231.2		170767	133930776	NM_133231.2	Rfxap	NP_573494.1	ILMN_2644992	000150139	S	855	GGTGCTTTCAGCCTAAGACAGTGCTGGTAATCAGACATTGGGGGCACACC	3	-	54608294-54608343	3qC	Mus musculus regulatory factor X-associated protein (Rfxap), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	5730495K23Rik	5730495K23Rik
Mus musculus	MEEBO	ILMN_210023	ILMN_210023	4930502E18RIK	scl0075013.1_318	XM_135429.1			20946686	XM_135429.1	4930502E18Rik		ILMN_1222772	003190184	S	1345	CCCATCCTCCCATGTTAGAATGCCAAAGCCATACACACAGGGTGGTTGTT										
Mus musculus	MEEBO	ILMN_193445	ILMN_193445	SCL0002958.1_89	scl0002958.1_89	BC024784.1			19353791	BC024784.1	scl0002958.1_89		ILMN_2497259	005290471	S	20	CAATATTTAGCAAAAGGGATCTACATGATACGACCAGCCGAGATTCTGGA										
Mus musculus	RefSeq	ILMN_212364	ILMN_212364	RP1H	NM_011283.1	NM_011283.1		19888	33468922	NM_011283.1	Rp1h	NP_035413.1	ILMN_2625575	007100164	S	6563	CCAGCTGTCAATATGTTTTTCCCATAAAAAGATGCAGTACATGGGATAGA	1	-	4334561-4334610	1qA1	Mus musculus retinitis pigmentosa 1 homolog (human) (Rp1h), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mG145; Orp1; Dcdc3; Rp1	mG145; Orp1; Dcdc3; Rp1
Mus musculus	RefSeq	ILMN_191259	ILMN_244304	PRKCZ	NM_008860.2	NM_008860.2		18762	84872199	NM_008860.2	Prkcz	NP_032886.2	ILMN_1221045	005820681	S	1909	CATCAACCCACTTCTGCTGTCTGCTGAGGAGTCCGTGTGAGGCCATGAGC	4	-	154636542-154636552:154636553-154636591	4qE2	Mus musculus protein kinase C, zeta (Prkcz), transcript variant 1, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 4700] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	zetaPKC; C80388; AI098070; Pkcz; R74924	zetaPKC; C80388; AI098070; Pkcz; R74924
Mus musculus	RefSeq	ILMN_191259	ILMN_244304	PRKCZ	NM_008860.2	NM_008860.2		18762	84872199	NM_008860.2	Prkcz	NP_032886.2	ILMN_2477540	001110392	S	4211	CGCCCTCCACGGCCAAGGTCGTTCTTACTCTTGCACATCCATTAAAGACT	4	-	154634240-154634289	4qE2	Mus musculus protein kinase C, zeta (Prkcz), transcript variant 1, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 4700] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	zetaPKC; C80388; AI098070; Pkcz; R74924	zetaPKC; C80388; AI098070; Pkcz; R74924
Mus musculus	RefSeq	ILMN_186182	ILMN_319981	BC030336	XM_001479114.1	XM_001479114.1		233812	149258059	XM_001479114.1	BC030336	XP_001479164.1	ILMN_2433330	004390670	S	650	GGTGGTTGGCATTATACCACTGATACAAAGTATTAGCAAAGTATAGTTCA				7qF2	PREDICTED: Mus musculus cDNA sequence BC030336 (BC030336), mRNA.					
Mus musculus	RefSeq	ILMN_186182	ILMN_319981	BC030336	XM_001479114.1	XM_001479114.1		233812	149258059	XM_001479114.1	BC030336	XP_001479164.1	ILMN_2540645	006980356	S	238	ATCATTTCCTTGACTGTCACATGTGGTTTGCTGGTGGCTTCCCACTGGCG				7qF2	PREDICTED: Mus musculus cDNA sequence BC030336 (BC030336), mRNA.					
Mus musculus	Riken	ILMN_202123	ILMN_202123	2810458H16RIK	ri|2810458H16|ZX00067O24|AK013364|1814					AK013364	2810458H16Rik		ILMN_1246004	000050438	S	1439	GGCTGTTTGCAGGATGAGCCCCACTGGAAAGAAAGGGCTTTGTGGAATCC										
Mus musculus	MEEBO	ILMN_187524	ILMN_187524	2600009P04RIK	scl066572.1_0						2600009P04Rik		ILMN_1214737	000650184	S	15	TCTGCGTTTGGTGTCTGGCCACGGCCCCATTTGAGCGTCCAACTCTCTCT										
Mus musculus	RefSeq	ILMN_220941	ILMN_220941	FABP1	NM_017399.3	NM_017399.3		14080	146134481	NM_017399.3	Fabp1	NP_059095.1	ILMN_2728928	005290291	S	431	ATATTTCATATTCTTTTACAGTGTAAAATTAATACAATAAAGTTACCTTT				6qC1	Mus musculus fatty acid binding protein 1, liver (Fabp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 5504] [evidence ISO]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	MGC13855; L-FABP; Fabpl	MGC13855; L-FABP; Fabpl
Mus musculus	Riken	ILMN_207154	ILMN_207154	LPL	ri|F730037C07|PL00003L11|AK089473|2424					AK089473	Lpl		ILMN_2585447	004610025	S	2022	ATCCTCGCCAGCATGTGCCCCAATGAAGGAGCTCGAGAAAGTACCCAAGG						A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of triacylglycerol, any triester of glycerol [goid 19433] [evidence IDA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate [goid 4465] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any triester of glycerol [goid 17129] [evidence IC ]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IDA]		
Mus musculus	MEEBO	ILMN_195778	ILMN_195778	XPR1	scl0019775.1_184	NM_011273.1			6755329	NM_011273.1	Xpr1		ILMN_2518618	001710523	S	19	GTTTTCTACTTCTACAATCCTTTCCTTCGACCAACGCAACCTCCAGCACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223696	ILMN_223696	CS	NM_026444.3	NM_026444.3		12974	118129843	NM_026444.3	Cs	NP_080720.1	ILMN_1241236	000670215	S	2420	CAGCAGTTACACACAGTTCCCACTGAATATCAGATGGATGGACCTAGGGC	10	+	127799127-127799176	10qD3	Mus musculus citrate synthase (Cs), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer [goid 46912] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA [goid 4108] [evidence ISA]	2610511A05Rik; 9030605P22Rik; Cis	2610511A05Rik; 9030605P22Rik; Cis
Mus musculus	RefSeq	ILMN_192699	ILMN_231446	SUPT4H1	NM_009296.1	NM_009296.1		20922	6678180	NM_009296.1	Supt4h1	NP_033322.1	ILMN_1247505	004290195	S	424	CTGTACTTGTTTTCTTGTGGAACTAAACCGTGGGACCCCAAAGACTCCCC	11	+	87556850-87556899	11qC	Mus musculus suppressor of Ty 4 homolog 1 (S. cerevisiae) (Supt4h1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any activity that increases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 8159] [evidence IEA]	AL022777; Supt4h	AL022777; Supt4h
Mus musculus	Riken	ILMN_203792	ILMN_203792	ENPP2	ri|A230077H09|PX00129A02|AK038940|2979					AK038940	Enpp2		ILMN_1248580	001410372	S	2918	TAGCTCAGAGGGTGACGGTCGGTGGCAGAGCCTACGATTTGACCCGTGAT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the reaction: H2O + 1-alkyl-sn-glycero-3-phosphoethanolamine = ethanol-amine + 1-alkyl-sn-glycerol 3-phosphate [goid 47391] [evidence IEA]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [evidence ISS]		
Mus musculus	RefSeq	ILMN_209829	ILMN_209829	BUTR1	NM_138678.2	NM_138678.2		192194	154350199	NM_138678.2	Butr1	NP_619619.2	ILMN_1231111	000460450	S	903	GAGTGTACAGTCACATGGCAGCATCATCAAAAGTTCAGAGTCTTTCTCTG				11qB1.3	Mus musculus butyrophilin related 1 (Butr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BUTR-1	BUTR-1
Mus musculus	RefSeq	ILMN_211336	ILMN_211336	SLC25A38	NM_144793.1	NM_144793.1		208638	21450144	NM_144793.1	Slc25a38	NP_659042.1	ILMN_2946905	001070592	S	1503	GGAGAGAATTGCTGCAAGTTGTCCTGATTTCCTCACATGCACCCAGACCC	9	+	120031227-120031276	9qF4	Mus musculus solute carrier family 25, member 38 (Slc25a38), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AV019094; BC010801; MGC18873	AV019094; BC010801; MGC18873
Mus musculus	RefSeq	ILMN_211336	ILMN_211336	SLC25A38	NM_144793.1	NM_144793.1		208638	21450144	NM_144793.1	Slc25a38	NP_659042.1	ILMN_2946901	006660079	S	1365	TCCTGCCATGTCTGAGGGCAAGAGGCTCAAGTTAGGGAAGACTGGACCTA	9	+	120029858-120029907	9qF4	Mus musculus solute carrier family 25, member 38 (Slc25a38), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AV019094; BC010801; MGC18873	AV019094; BC010801; MGC18873
Mus musculus	RefSeq	ILMN_211336	ILMN_211336	SLC25A38	NM_144793.1	NM_144793.1		208638	21450144	NM_144793.1	Slc25a38	NP_659042.1	ILMN_1256420	000940164	S	1085	GACTGCGCTGTCTGAAGAGCCAGGCACAAGTGCCGTCACCTTTTTTCCAG	9	+	120029517-120029554:120029776-120029787	9qF4	Mus musculus solute carrier family 25, member 38 (Slc25a38), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AV019094; BC010801; MGC18873	AV019094; BC010801; MGC18873
Mus musculus	RefSeq	ILMN_211183	ILMN_331456	LOC100045621	XM_001474619.1	XM_001474619.1		100045621	149257891	XM_001474619.1	LOC100045621	XP_001474669.1	ILMN_2613373	002000053	S	562	GCTAGTGGTAACACTCAGGTGAACAGAATATATGGAATCTTGGTGGCCCT					PREDICTED: Mus musculus similar to MOR 3Beta5 (LOC100045621), mRNA.					
Mus musculus	Riken	ILMN_203936	ILMN_203936	A130090K04RIK	ri|A130090K04|PX00125I14|AK038257|4656					AK038257	A130090K04Rik		ILMN_1230881	004780593	S	4324	CCCTCAGGGAGGGTTCAGACCACATAGTCACACAGAGGGAACAAAGGAAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_190839	ILMN_251483	NETO1	NM_144946.3	NM_144946.3		246317	141802001	NM_144946.3	Neto1	NP_659195.2	ILMN_2687473	004730598	S	900	GGAGATCGGAGCCTCTGGTGTAACGCACAGACATGATCTATGGACGCAGT	18	+	86565243-86565274:86565275-86565292	18qE4	Mus musculus neuropilin (NRP) and tolloid (TLL)-like 1 (Neto1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C130005O10Rik; Btcl1	C130005O10Rik; Btcl1
Mus musculus	RefSeq	ILMN_190839	ILMN_251483	NETO1	NM_144946.3	NM_144946.3		246317	141802001	NM_144946.3	Neto1	NP_659195.2	ILMN_2620827	006020201	S	2636	CTGCCTTTATCCAAACTTAAGAGTTGCAGACATGTGTTATTCCTTCGGCA	18	+	86670394-86670443	18qE4	Mus musculus neuropilin (NRP) and tolloid (TLL)-like 1 (Neto1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C130005O10Rik; Btcl1	C130005O10Rik; Btcl1
Mus musculus	RefSeq	ILMN_212106	ILMN_212106	OLFM1	NM_019498.2	NM_019498.2		56177	84370356	NM_019498.2	Olfm1	NP_062371.2	ILMN_1240615	004590215	S	2185	CTTGACCGTGTTGTTGTCTCTTAGATTAACTGTGCTGAGACTCCCGGTAG	2	+	28085714-28085763	2qA3	Mus musculus olfactomedin 1 (Olfm1), transcript variant 1, mRNA. XM_923993 XM_923996 XM_924001	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pancortin3; Noe1; AW742568; Pancortin; AMY; OlfA	Pancortin3; Noe1; AW742568; Pancortin; AMY; OlfA
Mus musculus	RefSeq	ILMN_212467	ILMN_212467	A730018C14RIK	NM_176956.2	NM_176956.2		319590	31342465	NM_176956.2	A730018C14Rik	NP_795930.1	ILMN_1222606	005490750	S	2159	GCAGGCACAAGCATCAAACGTTGTCCTGAGTCAGTTCCCTGATTCCTGGG	12	-	113652170-113652219	12qF1	Mus musculus RIKEN cDNA A730018C14 gene (A730018C14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212467	ILMN_212467	A730018C14RIK	NM_176956.2	NM_176956.2		319590	31342465	NM_176956.2	A730018C14Rik	NP_795930.1	ILMN_2626796	005270224	S	2150	CTGAGCCCAGCAGGCACAAGCATCAAACGTTGTCCTGAGTCAGTTCCCTG	12	-	113652179-113652228	12qF1	Mus musculus RIKEN cDNA A730018C14 gene (A730018C14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196472	ILMN_232596	RIMBP2	NM_001081388.1	NM_001081388.1		231760	124487058	NM_001081388.1	Rimbp2	NP_001074857.1	ILMN_1244474	002360307	S	3524	CCGGGGTCACTCTGTACCCACACGAAGAATGGTGGCTCTCTACGACTATG	5	-	129277609-129277658	5qG1.3	Mus musculus RIMS binding protein 2 (Rimbp2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			A930033C01Rik; mKIAA0318	A930033C01Rik; mKIAA0318
Mus musculus	RefSeq	ILMN_205565	ILMN_232596	RIMBP2	NM_001081388.1	NM_001081388.1		231760	124487058	NM_001081388.1	Rimbp2	NP_001074857.1	ILMN_1236311	001820168	S	3095	TTCACACAGTGGCGGAGGGTCTCATAGGCACCGCCCAGCGATGGCTCCAT	5	-	129286139-129286188	5qG1.3	Mus musculus RIMS binding protein 2 (Rimbp2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			A930033C01Rik; mKIAA0318	A930033C01Rik; mKIAA0318
Mus musculus	RefSeq	ILMN_204678	ILMN_232596	RIMBP2	NM_001081388.1	NM_001081388.1		231760	124487058	NM_001081388.1	Rimbp2	NP_001074857.1	ILMN_1251651	001340086	S	3835	CACCCTAATCAGGCATGTAGCCGTCACGTAAGTGAGCAACCGAAGACACC	5	-	129266655-129266697:129266698-129266704	5qG1.3	Mus musculus RIMS binding protein 2 (Rimbp2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			A930033C01Rik; mKIAA0318	A930033C01Rik; mKIAA0318
Mus musculus	RefSeq	ILMN_193462	ILMN_227388	DIAP2	NM_017398.2	NM_017398.2		54004	118130794	NM_017398.2	Diap2	NP_059094.1	ILMN_2646197	004590446	S	3988	GTGGGGAGCTACATAAATGAAGCAGGACAAGTAGAACTTGGTCTCAGTTG	X	+	126863173-126863222	XqE3	Mus musculus diaphanous homolog 2 (Drosophila) (Diap2), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IDA]	Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	DIA3; E430022I22Rik	DIA3; E430022I22Rik
Mus musculus	RefSeq	ILMN_194418	ILMN_231856	SH3BP4	NM_133816.2	NM_133816.2		98402	118130850	NM_133816.2	Sh3bp4	NP_598577.1	ILMN_2630092	001990593	S	3575	GACTTAGAAAGGACGTAAGAAAGGTGGTATCTAATTTTTTAATGGACTGT	1	+	91050270-91050319	1qD	Mus musculus SH3-domain binding protein 4 (Sh3bp4), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]		BOG25; AW227605; AI594717	BOG25; AW227605; AI594717
Mus musculus	RefSeq	ILMN_197237	ILMN_197237	LOC238662	XM_138646.3	XM_138646.3			38074710	XM_138646.3	LOC238662		ILMN_1232543	004480253	S	2875	AATGACTTCCAACCCCAGGGCCCCTCCGGAAAATCAGTTCACCAGCCAGG										
Mus musculus	RefSeq	ILMN_215411	ILMN_215411	CIB2	NM_019686.5	NM_019686.5		56506	148747105	NM_019686.5	Cib2	NP_062660.1	ILMN_2659168	004290114	S	165	ATGAGCTGGCTCCCAACCTCGTCCCGATGGACTACAGGAAGAGTCCCATC				9qA5.3	Mus musculus calcium and integrin binding family member 2 (Cib2), mRNA.		Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI449053; 2810434I23Rik	AI449053; 2810434I23Rik
Mus musculus	RefSeq	ILMN_188637	ILMN_188637	YPEL1	NM_023249.4	NM_023249.4		106369	146134954	NM_023249.4	Ypel1	NP_075738.1	ILMN_2454393	003890647	S	2171	GGGCATGCTATCTGCCCCTCAACTGAGCACTCTGTATTATCTTTTGTGAG				16qA3	Mus musculus yippee-like 1 (Drosophila) (Ypel1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ppil2; AV118478; 4930511F14Rik; mdgl-1; 4921520K19Rik; 1700016N17Rik; Dgl1; 0610009L05Rik; 1700019O22Rik	Ppil2; AV118478; 4930511F14Rik; mdgl-1; 4921520K19Rik; 1700016N17Rik; Dgl1; 0610009L05Rik; 1700019O22Rik
Mus musculus	RefSeq	ILMN_219685	ILMN_219685	C4BP	NM_007576.3	NM_007576.3		12269	115430100	NM_007576.3	C4bp	NP_031602.3	ILMN_2782794	006420403	S	1454	GCCTGCGCTTACAGGCAACAAGACCATGCAGTATGTGCCAAATTCACACG	1	-	132532877-132532926	1qE4	Mus musculus complement component 4 binding protein (C4bp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI195242	AI195242
Mus musculus	MEEBO	ILMN_186498	ILMN_186498	2810407A14RIK	scl48259.2.132_2						2810407A14Rik		ILMN_2436033	005890593	S	20	CAGAAAGCACTTCAGGAGCTTTCCCACACGGAGCGGTTGTTGTGGAATCA										
Mus musculus	RefSeq	ILMN_198438	ILMN_198438	LOC232364	XM_144972.2	XM_144972.2			38085133	XM_144972.2	LOC232364		ILMN_2531686	003800291	S	98	GTGGAATCATGGAGACTTACAGGCAGACAGAGAAACAAGGGAGCAAAGTT										
Mus musculus	Riken	ILMN_205154	ILMN_205154	A430091G03RIK	ri|A430091G03|PX00138P10|AK040395|2885					AK040395	A430091G03Rik		ILMN_1221524	006550411	S	2345	CATAGACCCGAAGGCTGTTGATGACAGAAACTTGTTCCAGCGCGTCCCGA										
Mus musculus	RefSeq	ILMN_201519	ILMN_201519	SPEER4A	NM_029376.2	NM_029376.2		75657	154146201	NM_029376.2	Speer4a	NP_083652.2	ILMN_1221938	004150719	S	813	CTGCGTGGGAATAGGCCCTACCGAGGAAGCCATGGCTGATTCAGGGCATT				5qB1	Mus musculus spermatogenesis associated glutamate (E)-rich protein 4a (Speer4a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700027N01Rik; SPEER-4A	1700027N01Rik; SPEER-4A
Mus musculus	RefSeq	ILMN_196959	ILMN_196959	LOC380765	XM_354677.1	XM_354677.1			38050423	XM_354677.1	LOC380765		ILMN_1248779	007050079	S	394	GGAACCATCTACTCCTCCGGCATTGCAAGTAATGTCTACCTGTGCCACCG										
Mus musculus	MEEBO	ILMN_216129	ILMN_216129	OLFR1215	scl0258451.1_245				33239023	NM_146459	Olfr1215		ILMN_2773054	004850577	S	804	AAATGTATTTATATTTGCTGATGTCTTGACACCGTTACTCAATCCTGTGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_219422	ILMN_219422	SLC7A13	NM_028746.2	NM_028746.2		74087	31980773	NM_028746.2	Slc7a13	NP_083022.1	ILMN_2708698	007050474	S	1522	GTGTTCCAGATAAAGGTTAAGTGTAAGCTAAAATAGTAATGATGGCAATG	4	+	19768765-19768814	4qA3	Mus musculus solute carrier family 7, (cationic amino acid transporter, y+ system) member 13 (Slc7a13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	XAT2; AGT-1; 0610009O04Rik; AGT1	XAT2; AGT-1; 0610009O04Rik; AGT1
Mus musculus	RefSeq	ILMN_207402	ILMN_227370	SEC15L2	XM_898417.2	XM_898417.2		75914	94377965	XM_898417.2	Sec15l2	XP_903510.2	ILMN_2587335	007150040	S	917	GAGCTAGAGTTCCAGAAGGTTGTAAGCTGCCCACTGTAGGTGCTGGGAAC	6	-	84911158-84911207	6qC3	PREDICTED: Mus musculus SEC15-like 2 (S. cerevisiae), transcript variant 4 (Sec15l2), mRNA.					
Mus musculus	RefSeq	ILMN_209708	ILMN_230072	RBM16	XM_619423.4	XM_619423.4		106583	149268278	XM_619423.4	Rbm16	XP_619423.4	ILMN_2598420	004280561	S	4960	GATTTTGTAAAAATCTCCACGATGGTCTCTGTTACTCCAAAGTAAGTGTG	17	+	3198686-3198735	17qA1	PREDICTED: Mus musculus RNA binding motif protein 16, transcript variant 1 (Rbm16), mRNA.					
Mus musculus	MEEBO	ILMN_188736	ILMN_188736	D230016O17	scl44414.1.1_179						D230016O17		ILMN_1220326	003890327	S	1	GTGACTCAGGCTCTAGCTCCTCAGAATCCCACCCTGTCACATGATGCTCC										
Mus musculus	RefSeq	ILMN_209053	ILMN_209053	HAS1	NM_008215.1	NM_008215.1		15116	6680168	NM_008215.1	Has1	NP_032241.1	ILMN_2997282	007320661	S	1768	CGTCGGAGCGGTGGTTACCGTGTCCAAGTATGAGTCCGGGCATGAAGATG	17	-	17980562-17980587:17980588-17980611	17qA3.2	Mus musculus hyaluronan synthase1 (Has1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-D-glucuronate + UDP-N-acetyl-D-glucosamine = [beta-N-acetyl-D-glucosaminyl(1,4)beta-D-glucuronosyl(1,3)](n) + 2n UDP [goid 50501] [evidence IEA]	HAS; MGC159127; MGC159129	HAS; MGC159127; MGC159129
Mus musculus	RefSeq	ILMN_204792	ILMN_244680	CTDSPL2	NM_212450.3	NM_212450.3		329506	146198569	NM_212450.3	Ctdspl2	NP_997615.1	ILMN_1219893	006130400	S	2862	GTCAGTATGCTTTGCCTCTCAACTGCATTAACATGCCGCAGGCTCAGACT				2qE5	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 (Ctdspl2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D2Ertd485e	D2Ertd485e
Mus musculus	RefSeq	ILMN_221382	ILMN_221382	IL1F5	NM_019451.1	NM_019451.1		54450	9506806	NM_019451.1	Il1f5	NP_062324.1	ILMN_2734863	004900079	S	1098	CTGACAGAAGATGACCAGGCACACTGTCCTGGTTTGAAACCAGAGGGGAC	2	+	24137423-24137472	2qA3	Mus musculus interleukin 1 family, member 5 (delta) (Il1f5), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Blocks the binding of interleukin-1 to the interleukin-1 receptor complex [goid 5152] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]	FIL1delta; IL-1H3; IL1HY1; AI413231	FIL1delta; IL-1H3; IL1HY1; AI413231
Mus musculus	RefSeq	ILMN_214249	ILMN_214249	RUFY1	NM_172557.2	NM_172557.2		216724	142388074	NM_172557.2	Rufy1	NP_766145.1	ILMN_1236988	000540128	S	2218	GGTACAGTGCCAAACTTGGGATCTCCAGAGACCTGTAGGGACCCAAGAGA	11	-	50203194-50203243	11qB1.3	Mus musculus RUN and FYVE domain containing 1 (Rufy1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IDA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IDA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]	ZFYVE12; 3000002E04Rik; Rabip4	ZFYVE12; 3000002E04Rik; Rabip4
Mus musculus	RefSeq	ILMN_189853	ILMN_242192	LOC640746	XM_917842.2	XM_917842.2		640746	94410587	XM_917842.2	LOC640746	XP_922935.2	ILMN_2464969	003170014	S	12	GATCTGGACACTGAAGAAGCCAAAAGCAGTTTCTAAGAAACTGAGCATGG					PREDICTED: Mus musculus similar to tripartite motif protein TRIM34 delta (LOC640746), mRNA.					
Mus musculus	RefSeq	ILMN_220749	ILMN_326812	NOV	NM_010930.4	NM_010930.4		18133	118130184	NM_010930.4	Nov	NP_035060.1	ILMN_1259573	004920470	S	2296	AGTGACTCTGGTATTAGTTTTGTGTTATCAGTTTAATGCTGTTTACTGAA	15	+	54585247-54585296	15qD1	Mus musculus nephroblastoma overexpressed gene (Nov), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	CCN3; C130088N23Rik	CCN3; C130088N23Rik
Mus musculus	RefSeq	ILMN_191194	ILMN_234309	PPP4R2	NM_182939.3	NM_182939.3		232314	146198720	NM_182939.3	Ppp4r2	NP_891984.1	ILMN_1219280	006400132	S	3475	GTGCCATGGACCATTTACAAACAAGTCAGTTTGCTGTTGGTTAAAAGTTG				6qD3	Mus musculus protein phosphatase 4, regulatory subunit 2 (Ppp4r2), mRNA. XM_924340		The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		BE691708; C230060M08Rik	BE691708; C230060M08Rik
Mus musculus	RefSeq	ILMN_201544	ILMN_201544	ADAD1	NM_009350.3	NM_009350.3		21744	153945869	NM_009350.3	Adad1	NP_033376.2	ILMN_2620655	006200259	S	1894	GAAATCTCCCTGTATAGAGCAATTTAGTATGTGAAGTAGACAACACATTG				3qB	Mus musculus adenosine deaminase domain containing 1 (testis specific) (Adad1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	Tenr	Tenr
Mus musculus	Riken	ILMN_206984	ILMN_206984	5031431M05RIK	ri|5031431M05|PX00642J17|AK077262|2485					AK077262	5031431M05Rik		ILMN_2584166	004560088	S	2248	TACACCTGGCGCCTGTACCCCACAGCAGGGAGTCCCATAGGAACCTCAAT										
Mus musculus	RefSeq	ILMN_212740	ILMN_212740	BTG1	NM_007569.1	NM_007569.1		12226	40363260	NM_007569.1	Btg1	NP_031595.1	ILMN_2866189	002680639	S	1561	GAAAGTGGAGGTCTGGTTTGTAACTTTCCTTGTACTCAATTGGGTAAGAG	10	+	96082024-96082073	10qC3	Mus musculus B-cell translocation gene 1, anti-proliferative (Btg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISO]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45663] [evidence ISO]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW546738	AW546738
Mus musculus	RefSeq	ILMN_212740	ILMN_212740	BTG1	NM_007569.1	NM_007569.1		12226	40363260	NM_007569.1	Btg1	NP_031595.1	ILMN_2866185	006480703	S	1382	GACCTTGTGTTTTTGGCGTTGAGAGTAGGGAGCGACCAGGCTCTGCCATG	10	+	96081845-96081894	10qC3	Mus musculus B-cell translocation gene 1, anti-proliferative (Btg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISO]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45663] [evidence ISO]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW546738	AW546738
Mus musculus	RefSeq	ILMN_234608	ILMN_234608	ABHD7	NM_001001804.1	NM_001001804.1		384214	49227068	NM_001001804.1	Abhd7	NP_001001804.1	ILMN_2833415	004280661	S	607	CTGCGGCATCCTGCCCAGCTGTTCAGATCCAGCTTTTATTACTTCTTCCA	5	+	107660086-107660135	5qE5	Mus musculus abhydrolase domain containing 7 (Abhd7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Gm1382; Ephxrp	Gm1382; Ephxrp
Mus musculus	RefSeq	ILMN_191733	ILMN_321391	4933431K14RIK	XM_001472662.1	XM_001472662.1		71295	149260116	XM_001472662.1	4933431K14Rik	XP_001472712.1	ILMN_2481694	002600047	S	1006	GTTTGAACCTCGGCCCTGTTTGTGTTGCTGTATGAGCCACTGACACCATC	9	+	85643690-85643739	9qE3.1	PREDICTED: Mus musculus RIKEN cDNA 4933431K14 gene (4933431K14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216929	ILMN_216929	NUTF2	NM_026532.2	NM_026532.2		68051	31543355	NM_026532.2	Nutf2	NP_080808.1	ILMN_2814575	004280170	S	1826	AGCTGCTGTGTATTGGGGGAAGTAGGGGTGGGAGAGAGGTAGATGCCAGC	8	+	108769391-108769440	8qD3	Mus musculus nuclear transport factor 2 (Nutf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]	MGC102015; Ntf2; AW546000; AI413596; AI115459; PP15; Ntf3; 2700067I02Rik	MGC102015; Ntf2; AW546000; AI413596; AI115459; PP15; Ntf3; 2700067I02Rik
Mus musculus	Riken	ILMN_202842	ILMN_202842	6720484N05RIK	ri|6720484N05|PX00060O16|AK032986|1406					AK032986	6720484N05Rik		ILMN_1240519	006180224	S	1057	GGGTTCTGGGCTTGTCAAGCTTGACTGGCTGATGCTTTTATGCGCTGAGC										
Mus musculus	RefSeq	ILMN_194634	ILMN_194634	ZFP369	NM_178364.5	NM_178364.5		170936	154350210	NM_178364.5	Zfp369	NP_848141.3	ILMN_2520663	002370270	S	443	TCTGGGCATTCTCTGGACCCTGAAATGAATTCCTTTCCTGCTGAGAGTCC				13qB3	Mus musculus zinc finger protein 369 (Zfp369), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B930030B22Rik; NRIF2; D230020H11Rik	B930030B22Rik; NRIF2; D230020H11Rik
Mus musculus	MEEBO	ILMN_190552	ILMN_190552	2310047C04RIK	scl48424.29_16				51830848	XM_358866	2310047C04Rik		ILMN_2471137	004860360	S	2	TCCAGACAATATCACCTACTCTTGGTCTTGCTTTGATGTGTTTGAACTAC										
Mus musculus	RefSeq	ILMN_216589	ILMN_216589	GIMAP9	NM_174960.2	NM_174960.2		317758	57863244	NM_174960.2	Gimap9	NP_777620.1	ILMN_1236553	007210373	S	783	TAGCAGGCTGAACCATTGTCTAGAGGAACTGAAGGAGACTTATGCTCAGC	6	+	48628103-48628152	6qB2.3	Mus musculus GTPase, IMAP family member 9 (Gimap9), mRNA.				A630002K24; BB145400	A630002K24; BB145400
Mus musculus	RefSeq	ILMN_198407	ILMN_198407	LOC381215	XM_355149.1	XM_355149.1			38084871	XM_355149.1	LOC381215		ILMN_2531581	002320563	S	184	CCTACAGTGAGATACCACACCCAGCTGACAGGACCCGTGATGCCCATCTG										
Mus musculus	RefSeq	ILMN_199610	ILMN_199610	LOC383737	XM_357215.1	XM_357215.1			38075013	XM_357215.1	LOC383737		ILMN_1243852	003390736	S	41	CATTTGAACAAAGCCGGTGCCTGTGGAGGGTCACACACTTGTCCTGCCAG										
Mus musculus	RefSeq	ILMN_200149	ILMN_200149	LOC385642	XM_359238.1	XM_359238.1			38080696	XM_359238.1	LOC385642		ILMN_1252856	003460338	S	1037	GTGGGGGCACAACCAGGCTAAAATGGCCTAAAGGATTGTGGCTGTAACCG										
Mus musculus	RefSeq	ILMN_190494	ILMN_326925	LOC100048295	XR_034465.1	XR_034465.1		100048295	149249534	XR_034465.1	LOC100048295		ILMN_2470646	001660703	S	2386	ATTAGGAGGTGTATGGTATTAGCTGCATCACTGTGTGGATGTCAATCTTA					PREDICTED: Mus musculus similar to Wilms tumor homolog (LOC100048295), misc RNA.					
Mus musculus	RefSeq	ILMN_245249	ILMN_245249	FBXL4	NM_172988.1	NM_172988.1		269514	27370491	NM_172988.1	Fbxl4	NP_766576.1	ILMN_2988384	004610435	S	2076	CCTTCTGTTCCCAGATTGATAACAAGGCTGTGTTAGAGCTCAACGCGAGC	4	+	22524478-22524527	4qA3	Mus musculus F-box and leucine-rich repeat protein 4 (Fbxl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4732456I21; FBL4; FBL5; AI836810	4732456I21; FBL4; FBL5; AI836810
Mus musculus	MEEBO	ILMN_193507	ILMN_193507	PROZ	scl34061.9_165				27754112	NM_025834	Proz		ILMN_2497831	002710113	S	12	AAGGCACTGTCTCAAACGAACAAATATAAGGGGCCAAAGCAGTGTGCCCT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IDA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]		
Mus musculus	Riken	ILMN_203908	ILMN_203908	9630003L17RIK	ri|9630003L17|PX00115K03|AK035777|4657					AK035777	9630003L17Rik		ILMN_1221769	006250441	S	4307	GACTGTGAGTCATCTAGGCTGCTTTCCTGTGGATGCTGACCCCTGGTCTC										
Mus musculus	RefSeq	ILMN_210486	ILMN_245913	CDC40	XM_483893.3	XM_483893.3		71713	94387950	XM_483893.3	Cdc40	XP_483893.1	ILMN_1243147	007550278	S	942	TCACAGCAAAGAGGCAGAAAAAAGGCAAACAGGAAGAAGAGAAACCTGGG	10	-	40569572-40569621	10qB1	PREDICTED: Mus musculus cell division cycle 40 homolog (yeast), transcript variant 1 (Cdc40), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]			
Mus musculus	RefSeq	ILMN_222355	ILMN_222355	INDOL1	NM_145949.1	NM_145949.1		209176	22122378	NM_145949.1	Indol1	NP_666061.1	ILMN_2748392	002750154	S	1857	TTGCTTTTGGGGCATGTTACTTCATCTTTTCTTACCCTGGGCCTCTTCCC	8	-	25643471-25643520	8qA2	Mus musculus indoleamine-pyrrole 2,3 dioxygenase-like 1 (Indol1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: tryptophan + O2 = N-formylkynurenine; includes both reactions D-tryptophan + O2 = N-formyl-D-kynurenine and L-tryptophan + O2 = N-formyl-L-kynurenine [goid 33754] [evidence IDA]; Catalysis of the reaction: tryptophan + O2 = N-formylkynurenine; includes both reactions D-tryptophan + O2 = N-formyl-D-kynurenine and L-tryptophan + O2 = N-formyl-L-kynurenine [goid 33754] [evidence IMP]	MGC31194; AI265623; C230043N17Rik	MGC31194; AI265623; C230043N17Rik
Mus musculus	RefSeq	ILMN_189021	ILMN_317746	LOC100044059	XM_001472706.1	XM_001472706.1		100044059	149261345	XM_001472706.1	LOC100044059	XP_001472756.1	ILMN_2457679	007320465	S	3755	TGAGAGGCATGCGGTATCACCCCATCGACATAGAAACCTCCGTGATCCGT	10	-	75723246-75723295		PREDICTED: Mus musculus similar to mKIAA0184 protein (LOC100044059), mRNA.					
Mus musculus	RefSeq	ILMN_216843	ILMN_242030	MYBPC2	NM_178067.3	NM_178067.3		233199	142347841	NM_178067.3	Mybpc2	NP_835168.1	ILMN_2676012	001070397	S	3475	GACAGCTCATCACCTGCTAAATAAGTCATCAGAACCCGGACACCAGCGCT	7	-	51757153-51757201:51757202-51757202	7qB4	Mus musculus myosin binding protein C, fast-type (Mybpc2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence TAS]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IPI]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC28149	MGC28149
Mus musculus	RefSeq	ILMN_219522	ILMN_219522	TBXA2R	NM_009325.3	NM_009325.3		21390	142378599	NM_009325.3	Tbxa2r	NP_033351.1	ILMN_2737840	006220176	S	1578	GCAAAGATACCTCCTCTATGCTAGAGAGGTCCTCCCTGACCCTCTCCCCG	10	+	80797576-80797625	10qC1	Mus musculus thromboxane A2 receptor (Tbxa2r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of molecular signals in which an ion or small molecule is formed or released into the cytosol, thereby helping relay the signal within the cell [goid 19932] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of smooth muscle contraction [goid 45987] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a thromboxane (TXA) to initiate a change in cell activity [goid 4960] [evidence IDA]	TP; MGC107665	TP; MGC107665
Mus musculus	RefSeq	ILMN_219522	ILMN_219522	TBXA2R	NM_009325.3	NM_009325.3		21390	142378599	NM_009325.3	Tbxa2r	NP_033351.1	ILMN_1248837	004490750	S	1545	GGAGCTACGACATGGGGCTGACTCCTGTGAACTGCAAAGATACCTCCTCT	10	+	80797543-80797592	10qC1	Mus musculus thromboxane A2 receptor (Tbxa2r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of molecular signals in which an ion or small molecule is formed or released into the cytosol, thereby helping relay the signal within the cell [goid 19932] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of smooth muscle contraction [goid 45987] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a thromboxane (TXA) to initiate a change in cell activity [goid 4960] [evidence IDA]	TP; MGC107665	TP; MGC107665
Mus musculus	RefSeq	ILMN_192567	ILMN_192567	VRK3	NM_133945.1	NM_133945.1		101568	19527165	NM_133945.1	Vrk3	NP_598706.1	ILMN_3160881	003710711	S	1632	TCCCTGTCTCAGCTCTGGCAGCTGTGGATGGAGGTAAGTGGATGCTGGCG	7	+	52032764-52032813	7qB4	Mus musculus vaccinia related kinase 3 (Vrk3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI428238	AI428238
Mus musculus	Riken	ILMN_204072	ILMN_204072	A730021C13RIK	ri|A730021C13|PX00149B01|AK042754|1518					AK042754	A730021C13Rik		ILMN_2562146	004200112	S	874	ACAGGGCAAAGACTGGTCTTACACCCTTGATGGAAGCAGCTTCTGGAGGA										
Mus musculus	RefSeq	ILMN_226462	ILMN_226462	U46068	NM_001012392.1	NM_001012392.1		228801	59939911	NM_001012392.1	U46068	NP_001012392.1	ILMN_3133532	003180356	A	1470	AGGCCTTGGGATACGAGAAAGCCATGTGGTCTGTGAGCAAGGGTGCCCTC	2	+	154043976-154044016:154045917-154045925	2qH1	Mus musculus cDNA sequence U46068 (U46068), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lplunc1; RP23-154J12.1	Lplunc1; RP23-154J12.1
Mus musculus	RefSeq	ILMN_210550	ILMN_210550	ABCC2	NM_013806.2	NM_013806.2		12780	116063565	NM_013806.2	Abcc2	NP_038834.2	ILMN_2655359	001010731	S	3758	CCTTGCTTCTGGTTATTTATAAGAATTCCTTAACCGGGGACACTGTGGGC	19	+	43902424-43902473	19qC3	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 2 (Abcc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates [goid 46581] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	AI173996; Abc30; Cmoat; cMRP; Mrp2	AI173996; Abc30; Cmoat; cMRP; Mrp2
Mus musculus	RefSeq	ILMN_210550	ILMN_210550	ABCC2	NM_013806.2	NM_013806.2		12780	116063565	NM_013806.2	Abcc2	NP_038834.2	ILMN_2606719	006130162	S	4508	GCCTCATTCAGACGACCATCCGGAACGAGTTCTCCCAGTGCACGGTCATC	19	+	43911178-43911227	19qC3	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 2 (Abcc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates [goid 46581] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	AI173996; Abc30; Cmoat; cMRP; Mrp2	AI173996; Abc30; Cmoat; cMRP; Mrp2
Mus musculus	RefSeq	ILMN_197647	ILMN_310477	LOC100043192	XM_001479822.1	XM_001479822.1		100043192	149233920	XM_001479822.1	LOC100043192	XP_001479872.1	ILMN_1260447	000450246	S	35	TTTCCTACTTGGGCCCGGCAGAATGGCTCCCGCAAAGAAGGGTGGCGAGA	1	-	66995486-66995514:66995515-66995535	1qC3	PREDICTED: Mus musculus similar to ribosomal protein L31 (LOC100043192), mRNA.					
Mus musculus	RefSeq	ILMN_217844	ILMN_242304	VPS13B	XM_981739.1	XM_981739.1		328525	94398521	XM_981739.1	Vps13b	XP_986833.1	ILMN_2688290	006840612	S	4908	GGCCATATTGACATATGGCTCAGAACTGGACATATGCAAACTTTAGCAGA					PREDICTED: Mus musculus vacuolar protein sorting 13B (yeast), transcript variant 4 (Vps13b), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	MEEBO	ILMN_186422	ILMN_186422	5830411K21RIK	scl19311.2_548						5830411K21Rik		ILMN_1245709	006110370	S	1	GGCGGCCATTGGGAGTGCTGCTAATGTGCGCATTGATGCACACTGTAGAT										
Mus musculus	RefSeq	ILMN_223238	ILMN_223238	3110001D03RIK	NM_025849.2	NM_025849.2		66928	31981161	NM_025849.2	3110001D03Rik	NP_080125.1	ILMN_2971131	004640168	S	604	CCCCTTGGAAGCAAACATGGTTCTCTGTCTTGTCCAGGGAGGTTATGTGC	4	-	74748653-74748702	4qC3	Mus musculus RIKEN cDNA 3110001D03 gene (3110001D03Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP24-200F10.1; 1700027K24Rik	RP24-200F10.1; 1700027K24Rik
Mus musculus	RefSeq	ILMN_198584	ILMN_198584	LOC278188	XM_204410.2	XM_204410.2			38086317	XM_204410.2	LOC278188		ILMN_1238573	004150717	S	719	TGGCCTCTGAGACATTACCACTCCCACTGGGGCTGGCCTGGATTCACTGC										
Mus musculus	RefSeq	ILMN_212086	ILMN_257429	CHKB	NM_007692.5	NM_007692.5		12651	142352841	NM_007692.5	Chkb	NP_031718.1	ILMN_2755021	007650167	S	1426	CTCGGTTCCAGTTCTACTTCCAGCAGAAGGGCCAGCTGACGAGTTCCCCA	15	-	89257029-89257078	15qE3	Mus musculus choline kinase beta (Chkb), mRNA.		The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + ethanolamine = ADP + O-phosphoethanolamine [goid 4305] [evidence IEA]; Catalysis of the reaction: ATP + choline = ADP + O-phosphocholine [goid 4103] [evidence IMP]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Chetk; Chkl; CK/EK-beta; CK/EK	Chetk; Chkl; CK/EK-beta; CK/EK
Mus musculus	RefSeq	ILMN_212086	ILMN_257429	CHKB	NM_007692.5	NM_007692.5		12651	142352841	NM_007692.5	Chkb	NP_031718.1	ILMN_2622560	007610113	S	1614	TCTGTAGCCTTTTCTTAGTACTTGCCCAAGGTGGGCATCTGAGAGCCCCC	15	-	89256841-89256890	15qE3	Mus musculus choline kinase beta (Chkb), mRNA.		The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + ethanolamine = ADP + O-phosphoethanolamine [goid 4305] [evidence IEA]; Catalysis of the reaction: ATP + choline = ADP + O-phosphocholine [goid 4103] [evidence IMP]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Chetk; Chkl; CK/EK-beta; CK/EK	Chetk; Chkl; CK/EK-beta; CK/EK
Mus musculus	RefSeq	ILMN_198828	ILMN_258731	LOC546929	XM_001004827.1	XM_001004827.1		546929	94418746	XM_001004827.1	LOC546929	XP_001004827.1	ILMN_1241061	004230520	S	174	CTACCCCTCCTCAGACAACAGGGTGGCACTATCTCCTTCTTCGATGTGGG					PREDICTED: Mus musculus similar to MAX protein isoform a (LOC546929), mRNA.					
Mus musculus	MEEBO	ILMN_188832	ILMN_188832	8430421H08RIK	scl0071478.1_259						8430421H08Rik		ILMN_1217781	007570327	S	17	TGAAACCTTGTGAATAAACAAATGTGACCAAGAAGGTAACAAGGTGGCTG										
Mus musculus	MEEBO	ILMN_211460	ILMN_211460	1810055D05RIK	scl0067713.1_159	NM_026332.2			40254494	NM_026332.2	1810055D05Rik		ILMN_2616129	002320736	S	1492	CTTCTTAATGAAGATACCATTTCTGTTACACCCTGGAATCCTTGAAATGC										
Mus musculus	RefSeq	ILMN_234033	ILMN_234033	OLFR1385	NM_001011805.1	NM_001011805.1		258027	58801375	NM_001011805.1	Olfr1385	NP_001011805.1	ILMN_2832651	001980372	S	774	CTTGCAACCCAAGAGCAGTTATTCTGAGAGTGATGGAAAATTTGTGGCCC	11	+	49308810-49308859	11qB1.2	Mus musculus olfactory receptor 1385 (Olfr1385), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-41P	MOR256-41P
Mus musculus	Riken	ILMN_202032	ILMN_202032	1810047B09RIK	ri|1810047B09|ZX00051K17|AK007800|2175					AK007800	1810047B09Rik		ILMN_2546511	002570414	S	1799	GTGCGCCCAGTGAGAACCGAGCCTGCTGTTAAAGCCCAAGCAAACGTCTT										
Mus musculus	Riken	ILMN_203222	ILMN_203222	PRKCSH	ri|B630016F04|PX00072H18|AK046762|2092					AK046762	Prkcsh		ILMN_2555646	003180112	S	1965	CTCTAACAACATAGGGAGAGCCAGGCCTTGGGAACTACTACTGCTCCAGC						A heterodimeric complex that catalyzes the trimming of glucose residues from N-linked core glycans on newly synthesized glycoproteins [goid 17177] [evidence IPI]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IPI]		
Mus musculus	RefSeq	ILMN_212427	ILMN_212427	RBM18	NM_026434.3	NM_026434.3		67889	142377962	NM_026434.3	Rbm18	NP_080710.1	ILMN_2626309	000290019	S	303	CAGTTTGACTTCCTCTTCCATAAGTCAGGTGCTTTGGAGGGCCAGCCCCG	2	-	35982678-35982727	2qB	Mus musculus RNA binding motif protein 18 (Rbm18), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AU015530; 2010004P11Rik	AU015530; 2010004P11Rik
Mus musculus	RefSeq	ILMN_212427	ILMN_212427	RBM18	NM_026434.3	NM_026434.3		67889	142377962	NM_026434.3	Rbm18	NP_080710.1	ILMN_2629627	004120553	S	2144	GTGTATCTGTGATGTGGGAAACTCTCCTTCCACTTGGGAGCTCATTCAGG	2	-	35971860-35971909	2qB	Mus musculus RNA binding motif protein 18 (Rbm18), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AU015530; 2010004P11Rik	AU015530; 2010004P11Rik
Mus musculus	MEEBO	ILMN_190171	ILMN_190171	TUB	scl000188.1_55	NM_021885.2			31560785	NM_021885.2	Tub		ILMN_2511823	006380328	S	12	CAGGGGGGACAGCAAATGGGTATGACAGGAGAAGAATATTTCTGTGCCCC						That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IMP]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]	A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [evidence IMP]		
Mus musculus	MEEBO	ILMN_190171	ILMN_190171	TUB	scl000188.1_55	NM_021885.2			31560785	NM_021885.2	Tub		ILMN_1220143	004560435	S	11	GCAGGGGGGACAGCAAATGGGTATGACAGGAGAAGAATATTTCTGTGCCC						That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IMP]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]	A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [evidence IMP]		
Mus musculus	RefSeq	ILMN_211469	ILMN_211469	LETMD1	NM_134093.1	NM_134093.1		68614	19527321	NM_134093.1	Letmd1	NP_598854.1	ILMN_2616215	001710458	S	1982	GTAGGGCTGTTTCTCCTCGTCACTATCATGGGCTAACTTCCACCCCTCCT	15	+	100309146-100309195	15qF1	Mus musculus LETM1 domain containing 1 (Letmd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI593524; MCC-32; HCCR-2; BB235638; 1110019O13Rik; BB130465; HCCR1; Mccr	AI593524; MCC-32; HCCR-2; BB235638; 1110019O13Rik; BB130465; HCCR1; Mccr
Mus musculus	RefSeq	ILMN_197225	ILMN_197225	LOC194642	XM_110710.3	XM_110710.3			38074666	XM_110710.3	LOC194642		ILMN_1249477	006660692	S	498	TTCGAAAGAGACAAGGGCTCTACTGGGCACAGTGAATGGTGGGCCTCAGC										
Mus musculus	RefSeq	ILMN_218316	ILMN_218316	HEATR5A	NM_177171.4	NM_177171.4		320487	118130348	NM_177171.4	Heatr5a	NP_796145.2	ILMN_2694279	001190110	S	7587	CAGAGGTGTAGCCAGAATTGAGAAAAACTGATTAGACCAAGAGCACGTGG	12	-	52976984-52977033	12qC1	Mus musculus HEAT repeat containing 5A (Heatr5a), mRNA.				mKIAA1316; C230081H03Rik; D930036F22Rik	mKIAA1316; C230081H03Rik; D930036F22Rik
Mus musculus	RefSeq	ILMN_218316	ILMN_218316	HEATR5A	NM_177171.4	NM_177171.4		320487	118130348	NM_177171.4	Heatr5a	NP_796145.2	ILMN_2741872	006520040	S	6590	GAAGGGATGTCCTCTAACAGTCTGTATGTCCTCTAACTGTCTATCACTGT	12	-	52977981-52978030	12qC1	Mus musculus HEAT repeat containing 5A (Heatr5a), mRNA.				mKIAA1316; C230081H03Rik; D930036F22Rik	mKIAA1316; C230081H03Rik; D930036F22Rik
Mus musculus	RefSeq	ILMN_200406	ILMN_200406	LOC386476	XM_359312.1	XM_359312.1			38081675	XM_359312.1	LOC386476		ILMN_2538642	006590050	S	774	AGACATAACTCAGCCTTAGACTCCCAGGGCGCATTTGCTAAAGCCCAGGG										
Mus musculus	RefSeq	ILMN_220930	ILMN_220930	PARK7	NM_020569.1	NM_020569.1		57320	10181131	NM_020569.1	Park7	NP_065594.2	ILMN_2728754	004730739	S	767	CGCCACACGGGGCTCTCATCCCGGGTCTGTATGTTTCTGAACCTTGCTAG	4	-	150271257-150271306	4qE2	Mus musculus Parkinson disease (autosomal recessive, early onset) 7 (Park7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IDA]; The directed movement of dopamine into a cell, typically presynaptic neurons or glial cells. Dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 51583] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; The process in which membrane potential changes in the hyperpolarizing direction from the resting potential, usually from negative to more negative [goid 60081] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]; The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 42743] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence TAS]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IMP]	DJ-1; Dj1	DJ-1; Dj1
Mus musculus	RefSeq	ILMN_196949	ILMN_228846	EG665239	XM_975549.1	XM_975549.1		665239	94392848	XM_975549.1	EG665239	XP_980643.1	ILMN_1218306	002190333	S	258	ACAGGCTGCAAGCACAGATGAGGCTGTGGCTCAAAGGACAGTGGTTCCCG	12	-	55489003-55489052	12qC1	PREDICTED: Mus musculus predicted gene, EG665239 (EG665239), mRNA.					
Mus musculus	MEEBO	ILMN_212244	ILMN_212244	CYB561D1	scl21654.3_502				51708359	XM_485295	Cyb561d1		ILMN_2624358	006180356	S	4400	GTCCTGAACTGGAAGGTGTATCAGCCTGGCAAAGCTACTTTATGAGTGGC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216577	ILMN_310316	LOC100048589	XM_001480260.1	XM_001480260.1		100048589	149249632	XM_001480260.1	LOC100048589	XP_001480310.1	ILMN_1227874	003310091	S	2543	CGCCTGTTTCCACCTAGAATACAGCGTGCAGGTTTGGCGTATGAAATAGA					PREDICTED: Mus musculus similar to CDNA sequence BC052040, transcript variant 1 (LOC100048589), mRNA.					
Mus musculus	RefSeq	ILMN_192031	ILMN_258860	SCN8A	NM_001077499.1	NM_001077499.1		20273	117414173	NM_001077499.1	Scn8a	NP_001070967.1	ILMN_2721059	003140022	S	5836	CCTGGCTAGGCGGGGCTTCATCTGCAGAAAGATCACTTCCAACAAGCTGG	15	+	100870903-100870952	15qF1-qF2	Mus musculus sodium channel, voltage-gated, type VIII, alpha (Scn8a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence IC ]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence NAS]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence NAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Nav1.6; AI853486; nmf2; seal; nmf58; NaCh6; med; nmf335; dmu; C630029C19Rik	Nav1.6; AI853486; nmf2; seal; nmf58; NaCh6; med; nmf335; dmu; C630029C19Rik
Mus musculus	RefSeq	ILMN_192031	ILMN_258860	SCN8A	NM_001077499.1	NM_001077499.1		20273	117414173	NM_001077499.1	Scn8a	NP_001070967.1	ILMN_2484374	001410707	S	8744	CTGCTTGCTCTAACTTTCACTCTGATCAGACCTCTCCCAGCAATGCCCCT	15	+	100873811-100873860	15qF1-qF2	Mus musculus sodium channel, voltage-gated, type VIII, alpha (Scn8a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence IC ]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence NAS]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence NAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Nav1.6; AI853486; nmf2; seal; nmf58; NaCh6; med; nmf335; dmu; C630029C19Rik	Nav1.6; AI853486; nmf2; seal; nmf58; NaCh6; med; nmf335; dmu; C630029C19Rik
Mus musculus	RefSeq	ILMN_200435	ILMN_200435	LOC384285	XM_358739.1	XM_358739.1			38081905	XM_358739.1	LOC384285		ILMN_2538753	002690278	S	12	AGCTTGGACCACCCTGCTCACACAGCAGAAGCACCTGGAACCGGCTTGTT										
Mus musculus	RefSeq	ILMN_208964	ILMN_208964	GPR119	NM_181751.2	NM_181751.2		236781	111186468	NM_181751.2	Gpr119	NP_861416.1	ILMN_2591255	005550392	S	1028	GGCAACTCCCTACTCAACCCACTCATCTATGCCTATTGGCAGAGGGAGGT	X	-	46026578-46026627	XqA4	Mus musculus G-protein coupled receptor 119 (Gpr119), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200809	ILMN_200809	EG384594	XM_357734.1	XM_357734.1		384594	38086278	XM_357734.1	EG384594	XP_357734.1	ILMN_1224926	001780639	S	95	ATCAAAGCCACAAAAAGAAGATCAGAACTTCACCTACCTTCTGGCAGCCC	7	-	32757444-32757493	7qB1	PREDICTED: Mus musculus predicted gene, EG384594 (EG384594), mRNA.					
Mus musculus	RefSeq	ILMN_220630	ILMN_220630	COVA1	NM_145951.2	NM_145951.2		209224	31559927	NM_145951.2	Cova1	NP_666063.1	ILMN_3009579	005870450	S	2782	TCTAGATGGATTCATGGGAAGTCTCCAGTATGACTACTGTGTTTGTGCTT	X	-	45255423-45255472	XqA4-qA5	Mus musculus cytosolic ovarian carcinoma antigen 1 (Cova1), mRNA.				AI314192; tNOX; MGC32453; APK1	AI314192; tNOX; MGC32453; APK1
Mus musculus	MEEBO	ILMN_212714	ILMN_212714	LOC382646	IGHD_V00786_Ig_heavy_constant_delta_68	XM_356604.1			38073818	XM_356604.1	LOC382646		ILMN_2749363	002100564	S	859	AGCAAAGTGACAGCTACATGGACTTAGAGGAGGAGAACGGCCTGTGGCCC										
Mus musculus	MEEBO	ILMN_212714	ILMN_212714	LOC382646	IGHD_V00786_Ig_heavy_constant_delta_68	XM_356604.1			38073818	XM_356604.1	LOC382646		ILMN_2749364	006980681	S	860	GCAAAGTGACAGCTACATGGACTTAGAGGAGGAGAACGGCCTGTGGCCCA										
Mus musculus	MEEBO	ILMN_212714	ILMN_212714	LOC382646	IGHD_V00786_Ig_heavy_constant_delta_68	XM_356604.1			38073818	XM_356604.1	LOC382646		ILMN_1258272	000430139	S	423	GTCACTCCAACTCTCCAAGCAAAGAATCACTCCACAGAAGCCACCAAAGC										
Mus musculus	MEEBO	ILMN_191394	ILMN_191394	ZCCHC6	scl00214290.1_251	NM_153538.1			23956301	NM_153538.1	Zcchc6		ILMN_2480136	004250682	S	7	TGGCCCCAAATGACAGGTGCTGCCGAATTTGTGGGAAAATCGGGCACTTC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_226232	ILMN_226232	HOXA13	NM_008264.1	NM_008264.1		15398	6680244	NM_008264.1	Hoxa13	NP_032290.1	ILMN_3015589	002940754	I	1268	TGGATTAAAAGGTGGAGCAGAGGGCAGCTTGAAGAAACGCTTAAGGATTT				6qB3	Mus musculus homeo box A13 (Hoxa13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway [goid 30510] [evidence IMP]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC124021; Hd; MGC124022; Hox-1.10; MGC124020	MGC124021; Hd; MGC124022; Hox-1.10; MGC124020
Mus musculus	RefSeq	ILMN_226232	ILMN_226232	HOXA13	NM_008264.1	NM_008264.1		15398	6680244	NM_008264.1	Hoxa13	NP_032290.1	ILMN_3087004	000270731	A	1053	CCTATAGGAGGGGGAGAAAGAAGCGCGTGCCTTACACTAAGGTGCAGTTG	6	-	52209057-52209106	6qB3	Mus musculus homeo box A13 (Hoxa13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway [goid 30510] [evidence IMP]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC124021; Hd; MGC124022; Hox-1.10; MGC124020	MGC124021; Hd; MGC124022; Hox-1.10; MGC124020
Mus musculus	RefSeq	ILMN_212966	ILMN_212966	ACCN5	NM_021370.2	NM_021370.2		58170	118130479	NM_021370.2	Accn5	NP_067345.1	ILMN_2632101	005390575	S	1461	TTTTTGCTGAAAATACTTGAAACGATACAGCGGACTTCTCCACCTCAGGC	3	+	81824959-81825008	3qE3	Mus musculus amiloride-sensitive cation channel 5, intestinal (Accn5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 15280] [evidence ISO]	Inac; Blinac	Inac; Blinac
Mus musculus	RefSeq	ILMN_199463	ILMN_199463	LOC383512	XM_357099.1	XM_357099.1			38049586	XM_357099.1	LOC383512		ILMN_1229555	001500332	S	624	GGCCTTGGCCGAAGAGAAACTAGGCACTGAGCTCCTAAGACAACATGATG										
Mus musculus	RefSeq	ILMN_222020	ILMN_240948	2310007F21RIK	NM_025857.2	NM_025857.2		66939	141802812	NM_025857.2	2310007F21Rik	NP_080133.1	ILMN_1238583	004070445	S	2276	TCTAGAAACAGTGGGTGCTGCTTTGCTCCGGGTTCCTGGGTTCCCACTCC	9	+	63489372-63489421	9qC	Mus musculus RIKEN cDNA 2310007F21 gene (2310007F21Rik), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_201838	ILMN_240948	2310007F21RIK	NM_025857.2	NM_025857.2		66939	141802812	NM_025857.2	2310007F21Rik	NP_080133.1	ILMN_1227353	000070113	S	989	GCACTAAGCTCTTCCTGCTAGGTTTGACTGACTCCAGTGCCAGCACCGTG	9	+	63488085-63488091:63488092-63488134	9qC	Mus musculus RIKEN cDNA 2310007F21 gene (2310007F21Rik), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	MEEBO	ILMN_195694	ILMN_195694	MJ-8000-187_7756	MJ-8000-187_7756						MJ-8000-187_7756		ILMN_2517845	003610020	S	10	GGTCTAAGGTTTGGAGAGATGGAGAGGGATGTTTTAATTGGGCATGGTGC										
Mus musculus	RefSeq	ILMN_215721	ILMN_242281	LOC665181	XM_979372.1	XM_979372.1		665181	94389883	XM_979372.1	LOC665181	XP_984466.1	ILMN_2662831	004070093	S	306	TGGGCAAAGTGATCCAGCGGGGCCGGCAGAGCAAAGGCCTGACCCAGAAG	11	+	5534368-5534417	11qA1	PREDICTED: Mus musculus similar to endothelial differentiation-related factor 1 (LOC665181), mRNA.					
Mus musculus	RefSeq	ILMN_209538	ILMN_234531	1110005A23RIK	NM_025364.1	NM_025364.1		66118	13384729	NM_025364.1	1110005A23Rik	NP_079640.1	ILMN_2596761	001230678	S	536	GCTGAAGAAACGGAAGGAGAGATTTGGGATTGTGACAAGTTCAGCTGGAA	10	+	128309494-128309543	10qD3	Mus musculus RIKEN cDNA 1110005A23 gene (1110005A23Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]	Cip29	Cip29
Mus musculus	RefSeq	ILMN_234531	ILMN_234531	1110005A23RIK	NM_025364.1	NM_025364.1		66118	13384729	NM_025364.1	1110005A23Rik	NP_079640.1	ILMN_2804251	007650333	S	435	GACACCAAGCCTATGGTTAACCTGGATAAACTAAAGGAAAGAGCACAGAG	10	+	128288224-128288238:128290239-128290273	10qD3	Mus musculus RIKEN cDNA 1110005A23 gene (1110005A23Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]	Cip29	Cip29
Mus musculus	RefSeq	ILMN_185612	ILMN_235441	AHCYL1	NM_145542.3	NM_145542.3		229709	144922632	NM_145542.3	Ahcyl1	NP_663517.2	ILMN_1245795	007210180	S	2406	CTCAGTAGGTTCACTTGGGTTTGTAGTCCAGCCTTCCACCAGTCTCTCTC	3	-	107467433-107467482	3qF2.3	Mus musculus S-adenosylhomocysteine hydrolase-like 1 (Ahcyl1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine [goid 4013] [evidence IEA]	Ahcy-rs3; 1110034F20Rik; AA409031; AA414901; DCAL; Irbit	Ahcy-rs3; 1110034F20Rik; AA409031; AA414901; DCAL; Irbit
Mus musculus	RefSeq	ILMN_185612	ILMN_235441	AHCYL1	NM_145542.3	NM_145542.3		229709	144922632	NM_145542.3	Ahcyl1	NP_663517.2	ILMN_2428506	003170114	S	3647	GTGTCCATAGGAATAATAGGTAAGGGCTAGTCTCTGTCAAGCCATGTAAC	3	-	107466192-107466241	3qF2.3	Mus musculus S-adenosylhomocysteine hydrolase-like 1 (Ahcyl1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine [goid 4013] [evidence IEA]	Ahcy-rs3; 1110034F20Rik; AA409031; AA414901; DCAL; Irbit	Ahcy-rs3; 1110034F20Rik; AA409031; AA414901; DCAL; Irbit
Mus musculus	MEEBO	ILMN_222724	ILMN_222724	4930413O22RIK	scl067986.7_30	NM_026493.2			31980919	NM_026493.2	4930413O22Rik		ILMN_2753887	001240673	S	2127	TATTTAAAGTTTATTAAAAGACCTCTCAGTTCTCAGTTTGGGAACCACAG										
Mus musculus	Riken	ILMN_205626	ILMN_205626	D230038L04RIK	ri|D230038L04|PX00189K05|AK052035|1772					AK052035	D230038L04Rik		ILMN_1220399	007510220	S	1579	GGAGCGTCACTAGCCTTCATGACAAGGTGATCACAAGTAACTGCCTTTCC										
Mus musculus	RefSeq	ILMN_192987	ILMN_224640	BAI3	NM_175642.3	NM_175642.3		210933	71896636	NM_175642.3	Bai3	NP_783573.3	ILMN_1218245	007040372	S	5018	CTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTAAGGTAATC	1	-	25124775-25124824	1qA5	Mus musculus brain-specific angiogenesis inhibitor 3 (Bai3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 16527] [evidence TAS]	MGC107444; A830096D10Rik	MGC107444; A830096D10Rik
Mus musculus	Riken	ILMN_202596	ILMN_202596	E430003J01RIK	ri|E430003J01|PX00096H08|AK088080|1227					AK088080	E430003J01Rik		ILMN_1234445	002230102	S	878	GGAAATGCATTGAATTAAGACTTTCCCGGGGCTGGTGAGATGGCTCAGCA										
Mus musculus	MEEBO	ILMN_191509	ILMN_191509	1700048O20RIK	scl069430.3_20						1700048O20Rik		ILMN_2479690	000150390	S	19	TGATCAGAAGGCCCTGCACGAGGAAGTGGTGCTTGAGAACTTTGCACATG										
Mus musculus	RefSeq	ILMN_221415	ILMN_221415	SLC17A3	NM_134069.2	NM_134069.2		105355	31542098	NM_134069.2	Slc17a3	NP_598830.1	ILMN_2751771	000160324	S	2381	GTAATGGTTTGTAGGTGTCTGTGGGTCACACCAAGTTCAGAGACCCAGGA	13	+	23950883-23950932	13qA3.1	Mus musculus solute carrier family 17 (sodium phosphate), member 3 (Slc17a3), mRNA.				RP23-480B19.1; Npt4; AW261723	RP23-480B19.1; Npt4; AW261723
Mus musculus	RefSeq	ILMN_221415	ILMN_221415	SLC17A3	NM_134069.2	NM_134069.2		105355	31542098	NM_134069.2	Slc17a3	NP_598830.1	ILMN_1249661	001510086	S	181	GCGCTATGGAATCGCCTTCGTCACACATTTCTGCAATTTCACACTGATGG	13	+	23937225-23937274	13qA3.1	Mus musculus solute carrier family 17 (sodium phosphate), member 3 (Slc17a3), mRNA.				RP23-480B19.1; Npt4; AW261723	RP23-480B19.1; Npt4; AW261723
Mus musculus	RefSeq	ILMN_221415	ILMN_221415	SLC17A3	NM_134069.2	NM_134069.2		105355	31542098	NM_134069.2	Slc17a3	NP_598830.1	ILMN_2924778	001580437	S	2948	AGCAGTGAAGTAGGGCTCATAGCAATAGCTACATGGACAGATCTTTCTAG	13	+	23951450-23951499	13qA3.1	Mus musculus solute carrier family 17 (sodium phosphate), member 3 (Slc17a3), mRNA.				RP23-480B19.1; Npt4; AW261723	RP23-480B19.1; Npt4; AW261723
Mus musculus	RefSeq	ILMN_213134	ILMN_213134	NUDCD1	NM_026149.3	NM_026149.3		67429	142387623	NM_026149.3	Nudcd1	NP_080425.2	ILMN_2634015	006200521	S	2969	CCAGAAGCTCATGTTTTAGAATGTTCTCAAGAGCTTAAGAGGCAGCAAAT	15	-	44206782-44206831	15qB3.2	Mus musculus NudC domain containing 1 (Nudcd1), mRNA.				CML66-L; 4921532K09Rik; Cml66; AA407246; AW556235; AW260430	CML66-L; 4921532K09Rik; Cml66; AA407246; AW556235; AW260430
Mus musculus	RefSeq	ILMN_212790	ILMN_212790	ERCC2	NM_007949.4	NM_007949.4		13871	145966759	NM_007949.4	Ercc2	NP_031975.2	ILMN_2630344	005960010	S	3244	GGCTGAGGATCTCCTTGTATAGCTCCTCTGCCTGCTGATACTTGTTCTGT				7qA3	Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 2 (Ercc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a hemopoietic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells [goid 60218] [evidence IMP]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence ISO]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISO]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a hair follicle to attain its fully functional state [goid 48820] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a hair cell [goid 35315] [evidence IMP]; A multicellular organismal process involved in the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body [goid 22405] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues [goid 21510] [evidence IMP]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AW240756; Ercc-2; AU020867; XPD; AA407812	AW240756; Ercc-2; AU020867; XPD; AA407812
Mus musculus	RefSeq	ILMN_212790	ILMN_212790	ERCC2	NM_007949.4	NM_007949.4		13871	145966759	NM_007949.4	Ercc2	NP_031975.2	ILMN_1216460	003310746	S	126	ATGGAGTCCTGGAGATGCCCTCGGGCACTGGGAAGACAGTGTCCCTATTG				7qA3	Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 2 (Ercc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a hemopoietic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells [goid 60218] [evidence IMP]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence ISO]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISO]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a hair follicle to attain its fully functional state [goid 48820] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a hair cell [goid 35315] [evidence IMP]; A multicellular organismal process involved in the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body [goid 22405] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues [goid 21510] [evidence IMP]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AW240756; Ercc-2; AU020867; XPD; AA407812	AW240756; Ercc-2; AU020867; XPD; AA407812
Mus musculus	RefSeq	ILMN_220834	ILMN_212790	ERCC2	NM_007949.4	NM_007949.4		13871	145966759	NM_007949.4	Ercc2	NP_031975.2	ILMN_1233075	005260181	S	2545	AGGCCCCTCGGACCCTGAGCATCAGCACACAAGATCTGAGCCCGCGCTAA				7qA3	Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 2 (Ercc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a hemopoietic stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells [goid 60218] [evidence IMP]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence ISO]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISO]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a hair follicle to attain its fully functional state [goid 48820] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a hair cell [goid 35315] [evidence IMP]; A multicellular organismal process involved in the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body [goid 22405] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues [goid 21510] [evidence IMP]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AW240756; Ercc-2; AU020867; XPD; AA407812	AW240756; Ercc-2; AU020867; XPD; AA407812
Mus musculus	RefSeq	ILMN_253249	ILMN_253249	ZFP69	NM_001005788.2	NM_001005788.2		381549	118131096	NM_001005788.2	Zfp69	NP_001005788.1	ILMN_2837396	004490356	S	1664	CTCATCCCTGAGCCGACACCAGAAAATCCACAGGAGGAACACTTTCCGAG	4	-	120602992-120603041	4qD2.2	Mus musculus zinc finger protein 69 (Zfp69), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm1029; Zfp63; KRAB2	Gm1029; Zfp63; KRAB2
Mus musculus	RefSeq	ILMN_199893	ILMN_253249	ZFP69	NM_001005788.2	NM_001005788.2		381549	118131096	NM_001005788.2	Zfp69	NP_001005788.1	ILMN_1230959	005080609	S	718	AAGCCTCCAGCTACAGTGATACATTAGAGAGTCACCGGGCAACCTGTGGG	4	-	120603938-120603987	4qD2.2	Mus musculus zinc finger protein 69 (Zfp69), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm1029; Zfp63; KRAB2	Gm1029; Zfp63; KRAB2
Mus musculus	RefSeq	ILMN_245550	ILMN_245550	DEFB1	NM_007843.2	NM_007843.2		13214	31982411	NM_007843.2	Defb1	NP_031869.1	ILMN_2804685	004120445	S	525	CCAGCACAGGAAGGTCACACGGAATGGAACAGAGAACACGGTACACAGGC	8	+	22905310-22905359	8qA2	Mus musculus defensin beta 1 (Defb1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]		mBD-1; AW260221	mBD-1; AW260221
Mus musculus	RefSeq	ILMN_215190	ILMN_215190	RFC1	NM_011258.1	NM_011258.1		19687	6755305	NM_011258.1	Rfc1	NP_035388.1	ILMN_1240620	003940577	S	4417	GGACCCTGGGCCTTGGCTGTAACCTGGCCTTTAGGTGTTTAGTTCTTTTT	5	-	65653310-65653359	5qC3.1	Mus musculus replication factor C (activator 1) 1 (Rfc1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]	RFC140; 140kDa; Recc1; MGC96526; Alp145	RFC140; 140kDa; Recc1; MGC96526; Alp145
Mus musculus	Riken	ILMN_207421	ILMN_207421	TRAF1	ri|F630118K07|PL00016E24|AK089281|1514					AK089281	Traf1		ILMN_1253947	002510164	S	1367	GCGGTGATGTTCTCTTACTCTCCGCCTCAGTCTCTACTTGCAGGCTGTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_196720	ILMN_196720	STFA2L1	NM_173869.3	NM_173869.3		268885	142371167	NM_173869.3	Stfa2l1	NP_776294.1	ILMN_2604046	002190379	S	125	TGAAGAGAAAACCAATGAGAAATATGAAAAATTCAAAGCCATCGAGTATA	16	+	36160046-36160095	16qB3	Mus musculus stefin A2 like 1 (Stfa2l1), mRNA.					
Mus musculus	RefSeq	ILMN_196720	ILMN_196720	STFA2L1	NM_173869.3	NM_173869.3		268885	142371167	NM_173869.3	Stfa2l1	NP_776294.1	ILMN_1242647	004260376	S	10	CAGCACCCTGCCCAGCAATGACTGAATACACCAGAAAAATAAAGGGAGGC	16	+	36156906-36156922:36156923-36156955	16qB3	Mus musculus stefin A2 like 1 (Stfa2l1), mRNA.					
Mus musculus	RefSeq	ILMN_217211	ILMN_217211	CPZ	NM_153107.2	NM_153107.2		242939	120407065	NM_153107.2	Cpz	NP_694747.2	ILMN_2680387	005910138	S	1793	AAGAGAGTCACCATTCCCTTGCGCATGAAGAAGGCCGGCCGTGTGGACTT	5	-	35845197-35845246	5qB3	Mus musculus carboxypeptidase Z (Cpz), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence TAS]	AV136066	AV136066
Mus musculus	Riken	ILMN_205693	ILMN_205693	A930011G23RIK	ri|A930011G23|PX00066B15|AK044414|2525					AK044414	A930011G23Rik		ILMN_2574529	005810296	S	2371	TCCTGTGGGGGAATGACTGATACCTAGACCTGGATGGCCCCTCAACCACC										
Mus musculus	RefSeq	ILMN_228350	ILMN_228350	LGR6	NM_001033409.1	NM_001033409.1		329252	84781784	NM_001033409.1	Lgr6	NP_001028581.1	ILMN_2980093	001340437	S	350	AGACCTCAGTATGAACAACCTCACGGAGCTTCAGCCGGGTCTCTTCCACC	1	-	136891658-136891707	1qE4	Mus musculus leucine-rich repeat-containing G protein-coupled receptor 6 (Lgr6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A530037C04Rik; D830026M09	A530037C04Rik; D830026M09
Mus musculus	RefSeq	ILMN_224531	ILMN_224531	ARV1	NM_026855.1	NM_026855.1		68865	21312117	NM_026855.1	Arv1	NP_081131.1	ILMN_2836173	001980682	S	946	CCCCAAAAGATCTGAACCACCTATACCAAGGCTGAACGCTCTCAGGCAGC	8	+	127619994-127620043	8qE2	Mus musculus ARV1 homolog (yeast) (Arv1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]		AW121084; 1110067L22Rik; AI461928	AW121084; 1110067L22Rik; AI461928
Mus musculus	Riken	ILMN_206137	ILMN_206137	C630015B10RIK	ri|C630015B10|PX00084O09|AK083112|2036					AK083112	C630015B10Rik		ILMN_1237849	003390026	S	1929	GCATCGGATACAGGTGATGGTGTACTGAGCTGGGGCACGCATTATGTGGC										
Mus musculus	RefSeq	ILMN_219379	ILMN_219379	PRKAB2	NM_182997.2	NM_182997.2		108097	72384346	NM_182997.2	Prkab2	NP_892042.2	ILMN_1215061	006980703	S	3724	GCCCTGGCCTCTTGGGCCGGAAGTACAAAGGAAGAAAACCCGTTTCTGAG	3	+	97476453-97476502	3qF2.2	Mus musculus protein kinase, AMP-activated, beta 2 non-catalytic subunit (Prkab2), mRNA.		The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence TAS]	Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of AMP [goid 4679] [evidence TAS]	BB124140; AW049591; 5730553K21Rik	BB124140; AW049591; 5730553K21Rik
Mus musculus	RefSeq	ILMN_198721	ILMN_198721	LOC233550	XM_133642.4	XM_133642.4			38087054	XM_133642.4	LOC233550		ILMN_1242546	000870564	S	966	TGCATCTGCTAGATCTGCGTGCTCATTAACTTCTACTCTAGTGGTGCACG										
Mus musculus	RefSeq	ILMN_200640	ILMN_200640	LOC384449	XM_357653.1	XM_357653.1			38084601	XM_357653.1	LOC384449		ILMN_1235109	004760681	S	370	TCTTTAAAATGCAAGGCCAGGCAGGAACCCAAGATCACGTCTGAGGAGCC										
Mus musculus	Riken	ILMN_207270	ILMN_207270	COL4A6	ri|G630031L05|PL00013C17|AK090269|3096					AK090269	Col4a6		ILMN_1231256	002510022	S	2719	CAGGAGTCAGCAGGAGTGATCAGAACCAGCAGTTCTCTGCAGTGCCTCTC						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212938	ILMN_212938	3110001A13RIK	NM_025626.3	NM_025626.3		66540	31541934	NM_025626.3	3110001A13Rik	NP_079902.1	ILMN_2807335	006420088	S	2667	TGCTAGGTCTCAGAGCATCCGGGGAGCAGAGCGGGGCCTTTAGGAATCTG	2	+	3698925-3698974	2qA1	Mus musculus RIKEN cDNA 3110001A13 gene (3110001A13Rik), mRNA.				AA959793; AA589595; AI132312	AA959793; AA589595; AI132312
Mus musculus	MEEBO	ILMN_186490	ILMN_186490	D930008O12RIK	scl49569.1_501						D930008O12Rik		ILMN_2435965	003310687	S	16	GGAGGGGGTATTAGACTGGAGTCTAGTCCCATAACCACATGGTGCAGACA										
Mus musculus	MEEBO	ILMN_214832	ILMN_214832	MYL9	scl0003000.1_3	XM_283793.2			38075216	XM_283793.2	Myl9		ILMN_2652458	001170307	S	374	GTATCTGGAGGGCATGATGAACGAGGCGCCAGGGCCCATCAACTTCACCA						A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211199	ILMN_211199	ARHGAP21	scl071435.1_313	XM_130033.5			38074458	XM_130033.5	Arhgap21		ILMN_2613531	000770577	S	6850	TGCATGAGGACTTTATCCAAACCTGTGTCATGCCTGTGTGCATACCCAAC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_198951	ILMN_198951	TMEM22	XM_147067.6	XM_147067.6		245020	149260187	XM_147067.6	Tmem22	XP_147067.5	ILMN_1232065	003850360	S	1009	GCATGTGGACCGCACTGTTTACCTTCGGTTGGACTGGAACAATCTGGGGA	9	-	100453138-100453187	9qE3.3-qE4	PREDICTED: Mus musculus transmembrane protein 22 (Tmem22), mRNA.					
Mus musculus	RefSeq	ILMN_236077	ILMN_236077	GM382	NM_001033241.1	NM_001033241.1		211208	85701739	NM_001033241.1	Gm382	NP_001028413.1	ILMN_2800112	002900100	S	3171	CCCCTTCACCTACAACCTTACATCATTGGGCACAAGGGAAGTGGTTTACG	X	+	122530682-122530731	XqE3	Mus musculus gene model 382, (NCBI) (Gm382), mRNA.					
Mus musculus	RefSeq	ILMN_201478	ILMN_201478	LOC385236	XM_358135.1	XM_358135.1			38094066	XM_358135.1	LOC385236		ILMN_2542444	002940768	S	119	GCAGCGTGGGGTCCTTGAGTGATAAAGAACCTCTGTATGGTTTAGATGGC										
Mus musculus	RefSeq	ILMN_193807	ILMN_193807	DOLK	NM_177648.3	NM_177648.3		227697	113930710	NM_177648.3	Dolk	NP_808316.1	ILMN_1226126	004570767	S	1859	GGAAGCGTACACTACTCAGATAGACAATCTCCTGTTGCCTCTCTACCTAC	2	-	30139966-30140015	2qB	Mus musculus dolichol kinase (Dolk), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC36683; BC026973; mKIAA1094; Tmem15	MGC36683; BC026973; mKIAA1094; Tmem15
Mus musculus	Riken	ILMN_202709	ILMN_202709	4632401N01RIK	ri|4632401N01|PX00012C16|AK019479|3812					AK019479	4632401N01Rik		ILMN_1253925	006290239	S	3534	CATAGGAAACTCTGGGACAAAGGTGGTCAGAGATGAAAGCCAGTGGGACC										
Mus musculus	MEEBO	ILMN_194615	ILMN_194615	CLTC	scl39779.32_100				51491844	NM_001003908	Cltc		ILMN_2508001	005130315	S	19	TTCATAGTTTCATACTGGATACTGCTGGAGCATTACCGGGAGCCATAGAG						Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex [goid 30132] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212131	ILMN_212131	ADORA2A	NM_009630.2	NM_009630.2		11540	126517499	NM_009630.2	Adora2a	NP_033760.2	ILMN_2623091	003360386	S	1567	TAGAGCTTCTTACCCAGGAGCACCAGGAAGGGCAAGAGCACCCTGGCCTA	10	+	74796566-74796615	10qC1	Mus musculus adenosine A2a receptor (Adora2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates, maintains or increases the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32230] [evidence IGI]; Any process that activates, maintains or increases the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32230] [evidence IDA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; The series of molecular signals generated as a consequence of an adenosine receptor binding to one of its physiological ligands [goid 1973] [evidence IMP]; Any process that directly activates any of the steps required for cell death by apoptosis as a result of a chemical stimulus [goid 31558] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IGI]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IGI]; The series of molecular signals generated as a consequence of an adenosine receptor binding to one of its physiological ligands [goid 1973] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IDA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IMP]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IDA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IMP]	A2AAR; MGC118414; A2aR	A2AAR; MGC118414; A2aR
Mus musculus	RefSeq	ILMN_201420	ILMN_255118	LOC436541	XR_001611.1	XR_001611.1		436541	94397127	XR_001611.1	LOC436541		ILMN_1246582	000620296	S	270	AGCCATGCTCCTGGTCCTCATCTCGTTCCTCGGGATACATTTCTTCCTGG	14	+	52023748-52023797		PREDICTED: Mus musculus similar to TRAV9-1 (LOC436541), misc RNA.					
Mus musculus	RefSeq	ILMN_243346	ILMN_243346	FNDC8	NM_030224.1	NM_030224.1		78919	113931163	NM_030224.1	Fndc8	NP_084500.1	ILMN_2859932	001710259	S	1788	CTACCAGGCAGACGCAGAAATCTCTCCACAGACGACTGGAGGCCGTGAAC	11	+	82713946-82713995	11qC	Mus musculus fibronectin type III domain containing 8 (Fndc8), mRNA.				4930466G16Rik	4930466G16Rik
Mus musculus	RefSeq	ILMN_209470	ILMN_243346	FNDC8	NM_030224.1	NM_030224.1		78919	113931163	NM_030224.1	Fndc8	NP_084500.1	ILMN_1223273	000580376	S	1923	CACAGCCTTAATCTTTCCACTGGCCACTGGCCTCTCCCTTATTGCAATGC	11	+	82714081-82714130	11qC	Mus musculus fibronectin type III domain containing 8 (Fndc8), mRNA.				4930466G16Rik	4930466G16Rik
Mus musculus	RefSeq	ILMN_206806	ILMN_243346	FNDC8	NM_030224.1	NM_030224.1		78919	113931163	NM_030224.1	Fndc8	NP_084500.1	ILMN_1247113	000110142	S	1279	CTTCCCTGACCTGGGCTGGTTCCAGGTTCCCCATTAAAGAACTGAAGGCC	11	+	82713437-82713486	11qC	Mus musculus fibronectin type III domain containing 8 (Fndc8), mRNA.				4930466G16Rik	4930466G16Rik
Mus musculus	Riken	ILMN_204843	ILMN_204843	A130027D22RIK	ri|A130027D22|PX00122E07|AK037575|1651					AK037575	A130027D22Rik		ILMN_1233685	002810184	S	1423	CTCAGAGTCAGCACCCTATAATCACCCCAAACCCAGATGCCTAGATGCCA										
Mus musculus	RefSeq	ILMN_212674	ILMN_254220	9130404H23RIK	XM_977317.1	XM_977317.1		74556	94403084	XM_977317.1	9130404H23Rik	XP_982411.1	ILMN_1225257	002030300	S	1711	GGTCACTAAGGAGTCTCTGGCCTTTAGTAATTGCTTGGTTATTCGCCGTC				17qE1.1	PREDICTED: Mus musculus RIKEN cDNA 9130404H23 gene (9130404H23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220797	ILMN_220797	NR1H4	NM_009108.1	NM_009108.1		20186	6677830	NM_009108.1	Nr1h4	NP_033134.1	ILMN_2727013	002370747	S	1633	CAAGGCTTCAGGAAACCCCACTGGCATGCCCTTTTGGCCTAATTAAATCA	10	-	88917238-88917287	10qC2	Mus musculus nuclear receptor subfamily 1, group H, member 4 (Nr1h4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	HRR1; Fxr; AI957360; RIP14; Rxrip14	HRR1; Fxr; AI957360; RIP14; Rxrip14
Mus musculus	RefSeq	ILMN_192572	ILMN_192572	TUBGCP3	NM_198031.1	NM_198031.1		259279	39930566	NM_198031.1	Tubgcp3	NP_932148.1	ILMN_2489340	003060202	S	3568	TGTCTTATCCAGTCACATAATTATGCCTTTTTTATGTTGCATAAGTGAAA	8	-	12614308-12614357	8qA1.1	Mus musculus tubulin, gamma complex associated protein 3 (Tubgcp3), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]		Spc98p; GCP3	Spc98p; GCP3
Mus musculus	RefSeq	ILMN_204030	ILMN_192776	USP36	XM_126772.6	XM_126772.6		72344	94390967	XM_126772.6	Usp36	XP_126772.5	ILMN_1224255	005870673	S	3370	CTCGATCAAACTCTTCATCCCAGTCGTCAACCACGGTCTGGGTCCGGGCT	11	-	118123400-118123444:118123703-118123707	11qE2	PREDICTED: Mus musculus ubiquitin specific peptidase 36, transcript variant 1 (Usp36), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192776	ILMN_192776	USP36	XM_126772.6	XM_126772.6		72344	94390967	XM_126772.6	Usp36	XP_126772.5	ILMN_2491232	002060431	S	5207	GGCAGTAGACATGTTTTAGGCCCATTTGCAGAGGGCCACCTCCCTGGTGT	11	-	118121132-118121181	11qE2	PREDICTED: Mus musculus ubiquitin specific peptidase 36, transcript variant 1 (Usp36), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201081	ILMN_251970	LOC640014	XM_916715.3	XM_916715.3		640014	149254415	XM_916715.3	LOC640014	XP_921808.3	ILMN_2541011	001820626	S	1047	GAGACTCGTGTATGGCCTCGTGGGCACTGTGTTGGCACTGCTACTTGTCC					PREDICTED: Mus musculus similar to hCG1817833 (LOC640014), mRNA.					
Mus musculus	RefSeq	ILMN_184617	ILMN_224953	MTDH	NM_026002.4	NM_026002.4		67154	89363043	NM_026002.4	Mtdh	NP_080278.3	ILMN_1224434	002850022	S	2417	CGTGAGGCCAGTAGGCAAGTCCTTGGATCTTATGCACGACCTTAGACCAT	15	+	34070877-34070926	15qB3.1	Mus musculus Metadherin (Mtdh), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]			3D3/Lyric; 3D3; Lyric; 2610103J23Rik; AV353288; D8Bwg1112e	3D3/Lyric; 3D3; Lyric; 2610103J23Rik; AV353288; D8Bwg1112e
Mus musculus	RefSeq	ILMN_214500	ILMN_214500	AKAP4	NM_009651.3	NM_009651.3		11643	110347480	NM_009651.3	Akap4	NP_033781.2	ILMN_3051805	005890136	I	21	AGGGTTGAAGAAAGACCTAACATCTTGAGGCAGACTGGAAGAGTCATCGC	X	+	6644665-6644714	XqA1.1	Mus musculus A kinase (PRKA) anchor protein 4 (Akap4), transcript variant 1, mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IPI]	p82; Fsc1	p82; Fsc1
Mus musculus	RefSeq	ILMN_214500	ILMN_214500	AKAP4	NM_009651.3	NM_009651.3		11643	110347480	NM_009651.3	Akap4	NP_033781.2	ILMN_3128227	001170487	A	2580	TGCCAAAGAACGACAACTGGATGAAGCCGTGGGCAACATGGCTAGAAAGC	X	+	6655464-6655513	XqA1.1	Mus musculus A kinase (PRKA) anchor protein 4 (Akap4), transcript variant 1, mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IPI]	p82; Fsc1	p82; Fsc1
Mus musculus	RefSeq	ILMN_223151	ILMN_214500	AKAP4	NM_009651.3	NM_009651.3		11643	110347480	NM_009651.3	Akap4	NP_033781.2	ILMN_2759971	002710082	S	83	CTCCAAAAGAAAACATCCAAAGGTCCAAAATGATTGCCTACTGTGGTACT	X	+	6644727-6644755:6644756-6644776	XqA1.1	Mus musculus A kinase (PRKA) anchor protein 4 (Akap4), transcript variant 1, mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IPI]	p82; Fsc1	p82; Fsc1
Mus musculus	RefSeq	ILMN_214500	ILMN_214500	AKAP4	NM_009651.3	NM_009651.3		11643	110347480	NM_009651.3	Akap4	NP_033781.2	ILMN_2773339	005690338	S	2565	GGAGGTCATGAAGTTTGCCAAAGAACGACAACTGGATGAAGCCGTGGGCA	X	+	6655449-6655498	XqA1.1	Mus musculus A kinase (PRKA) anchor protein 4 (Akap4), transcript variant 1, mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IPI]	p82; Fsc1	p82; Fsc1
Mus musculus	RefSeq	ILMN_217531	ILMN_235346	LOC676222	XM_988270.1	XM_988270.1		676222	94377680	XM_988270.1	LOC676222	XP_993364.1	ILMN_2762200	007510398	S	132	AGCCAGCCAGAGTGTCGATTATAATGGAATTAGTTATATGCACTGGTTCC					PREDICTED: Mus musculus similar to Ig kappa chain V-III region PC 7043 (LOC676222), mRNA.					
Mus musculus	RefSeq	ILMN_195904	ILMN_235346	LOC676222	XM_988270.1	XM_988270.1		676222	94377680	XM_988270.1	LOC676222	XP_993364.1	ILMN_1244008	004780379	S	30	GCTGCTGCTCTGGGTTCCAGGCTCCACTGGTGACATTGTGCTGACCCAAT					PREDICTED: Mus musculus similar to Ig kappa chain V-III region PC 7043 (LOC676222), mRNA.					
Mus musculus	RefSeq	ILMN_210134	ILMN_210134	MGST3	NM_025569.1	NM_025569.1		66447	13385009	NM_025569.1	Mgst3	NP_079845.1	ILMN_1238479	003710544	S	326	TGGCCTGGATTATTGGGCGAGTCCTTTACGCATATGGCTACTACACAGGA	1	-	169303924-169303973	1qH2.3	Mus musculus microsomal glutathione S-transferase 3 (Mgst3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	GST-III; 2010306B17Rik; 2010012L10Rik; 2700004G04Rik; AA516734	GST-III; 2010306B17Rik; 2010012L10Rik; 2700004G04Rik; AA516734
Mus musculus	RefSeq	ILMN_210134	ILMN_210134	MGST3	NM_025569.1	NM_025569.1		66447	13385009	NM_025569.1	Mgst3	NP_079845.1	ILMN_2615035	004210619	S	490	TACGGGTCCAGATCCTGCCACCACTGAGGTGTGGAGGGCCTTCCGACTCT	1	-	169302610-169302633:169302634-169302659	1qH2.3	Mus musculus microsomal glutathione S-transferase 3 (Mgst3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	GST-III; 2010306B17Rik; 2010012L10Rik; 2700004G04Rik; AA516734	GST-III; 2010306B17Rik; 2010012L10Rik; 2700004G04Rik; AA516734
Mus musculus	RefSeq	ILMN_198846	ILMN_198846	LOC236311	XM_135607.2	XM_135607.2			38089056	XM_135607.2	LOC236311		ILMN_1220210	001510519	S	596	TCTGGAATTGAGAGGATGAAAGACTCCCAGCTCAATGTTCTCCTACCTGT										
Mus musculus	Riken	ILMN_207282	ILMN_207282	G630039M15RIK	ri|G630039M15|PL00013K18|AK090297|1142					AK090297	G630039M15Rik		ILMN_1246542	001240161	S	561	GAACTTGAGCCAGGAAGAGCGTAAGTTAGAGGCTGCTTGGGCTACCTTGC										
Mus musculus	RefSeq	ILMN_217544	ILMN_217544	GPM6A	NM_153581.2	NM_153581.2		234267	31981997	NM_153581.2	Gpm6a	NP_705809.1	ILMN_2909336	005900368	S	3129	GTGCCAACAGCTTGATGGTGGCGTTTTTGAAATGTAGAACAAAGTGCTTG	8	+	56146138-56146187	8qB1.3	Mus musculus glycoprotein m6a (Gpm6a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			M6A; Gpm6; MGC38999	M6A; Gpm6; MGC38999
Mus musculus	RefSeq	ILMN_217544	ILMN_217544	GPM6A	NM_153581.2	NM_153581.2		234267	31981997	NM_153581.2	Gpm6a	NP_705809.1	ILMN_2684528	001570687	S	260	CTTGACAGCCAGTCTCTAAGCAAACAAGAGGCGCGAGGGAGCCTCAGCTA	8	+	56040455-56040504	8qB1.3	Mus musculus glycoprotein m6a (Gpm6a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			M6A; Gpm6; MGC38999	M6A; Gpm6; MGC38999
Mus musculus	Riken	ILMN_206158	ILMN_206158	D030006P03RIK	ri|D030006P03|PX00178H12|AK083427|3469					AK083427	D030006P03Rik		ILMN_2577999	002480356	S	3306	CAGGGAGGATACCGGGATGGCACCATTTAAGCTCTGGGTAGCCAGCTCCA										
Mus musculus	Riken	ILMN_206935	ILMN_206935	D630001H14RIK	ri|D630001H14|PX00195B02|AK085257|2374					AK085257	D630001H14Rik		ILMN_2583801	002060243	S	1721	CATCTGGCTTGCACAAGCTGAGCTCTAGGGATCTTGCTCACAGGGGATGG										
Mus musculus	RefSeq	ILMN_195958	ILMN_238641	PCK1	NM_011044.2	NM_011044.2		18534	118130217	NM_011044.2	Pck1	NP_035174.1	ILMN_1213632	002850577	S	2453	GGGGAAAAATCTTGGGCAAATTTGTAGCTGTAACTAGAGAGTCATGTTGC	2	+	172984591-172984640	2qH3	Mus musculus phosphoenolpyruvate carboxykinase 1, cytosolic (Pck1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IDA]; The chemical reactions and pathways resulting in the formation of glycerol, 1,2,3-propanetriol, from other compounds, including pyruvate [goid 46327] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IEA]; Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2 [goid 4613] [evidence IEA]; Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 [goid 4611] [evidence IMP]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Pck-1; AI265463; PEPCK	Pck-1; AI265463; PEPCK
Mus musculus	RefSeq	ILMN_258248	ILMN_258248	CNBP2	NM_029158.1	NM_029158.1		75064	55925629	NM_029158.1	Cnbp2	NP_083434.1	ILMN_2902833	002490554	S	574	GGGAATGCCCCATTGAGGCTACCGCTTAGTAACCCCCTTAAACGCCATCC	X	+	99833878-99833904:99833905-99833927	XqD	Mus musculus cellular nucleic acid binding protein 2 (Cnbp2), mRNA.				4930513O09Rik	4930513O09Rik
Mus musculus	RefSeq	ILMN_216591	ILMN_216591	REG3D	NM_013893.1	NM_013893.1		30053	21426886	NM_013893.1	Reg3d	NP_038921.1	ILMN_1216378	002370072	S	585	GGGTTAGGCCAGTTCTGATTTCAACTGCCTGAAAGTATCCTGAAGATCAC	6	-	78326013-78326062	6qC3	Mus musculus regenerating islet-derived 3 delta (Reg3d), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Ingaprp; MGC130575	Ingaprp; MGC130575
Mus musculus	RefSeq	ILMN_209534	ILMN_209534	NMT2	NM_008708.1	NM_008708.1		18108	6679083	NM_008708.1	Nmt2	NP_032734.1	ILMN_2596704	006450373	S	1485	GACCTTCTTGGAAAAACTAAAGTTTGGTATAGGAGATGGCAACTTACAGT	2	+	3242580-3242629	2qA1	Mus musculus N-myristoyltransferase 2 (Nmt2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The myristoylation of the N-terminal glycine of proteins to form the derivative N-myristoyl-glycine [goid 18008] [evidence ISA]; The covalent or non-covalent attachment of a myristoyl moiety to the N-terminal amino acid residue of a protein [goid 6499] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide [goid 4379] [evidence TAS]; Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide [goid 4379] [evidence ISA]	hNMT-2; AI605445; A930001K02Rik	hNMT-2; AI605445; A930001K02Rik
Mus musculus	Riken	ILMN_202197	ILMN_202197	1700081D05RIK	ri|1700081D05|ZX00076F19|AK006963|594					AK006963	1700081D05Rik		ILMN_2547762	005550093	S	520	CCGCTGTGGAGAGCGCGAGCCTTGCTTATCCCCGAGTTAATTCCCATTTG										
Mus musculus	RefSeq	ILMN_201585	ILMN_239704	USP7	NM_001003918.2	NM_001003918.2		252870	154146208	NM_001003918.2	Usp7	NP_001003918.2	ILMN_1235439	006370300	S	4257	CAATTTGCCCTGGGAGGAGGCCGTTTTCTATTGGGTGAGTGCGAGTGACC				16qA1	Mus musculus ubiquitin specific peptidase 7 (Usp7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AU019296; AW548146; AA409944; Hausp; 2210010O09Rik; AA617399; C80752	AU019296; AW548146; AA409944; Hausp; 2210010O09Rik; AA617399; C80752
Mus musculus	RefSeq	ILMN_189361	ILMN_239704	USP7	NM_001003918.2	NM_001003918.2		252870	154146208	NM_001003918.2	Usp7	NP_001003918.2	ILMN_1221908	002690193	S	5111	GGTTCTGAGCCAGTCTGTAACCCGACTTCCTTTCTCTGTTGCACTATGAA				16qA1	Mus musculus ubiquitin specific peptidase 7 (Usp7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AU019296; AW548146; AA409944; Hausp; 2210010O09Rik; AA617399; C80752	AU019296; AW548146; AA409944; Hausp; 2210010O09Rik; AA617399; C80752
Mus musculus	RefSeq	ILMN_239704	ILMN_239704	USP7	NM_001003918.2	NM_001003918.2		252870	154146208	NM_001003918.2	Usp7	NP_001003918.2	ILMN_3160648	006980047	S	3252	GCCACAACCTGGTAACATGTCTCATCCTCGGCCTTGGCTAGGGCTTGACC				16qA1	Mus musculus ubiquitin specific peptidase 7 (Usp7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AU019296; AW548146; AA409944; Hausp; 2210010O09Rik; AA617399; C80752	AU019296; AW548146; AA409944; Hausp; 2210010O09Rik; AA617399; C80752
Mus musculus	RefSeq	ILMN_199838	ILMN_253786	LOC626259	XM_910661.2	XM_910661.2		626259	94399032	XM_910661.2	LOC626259	XP_915754.1	ILMN_1237156	003940102	S	312	GCCAAGGAGAACTGGAGACAGGAAGCGCAAGTCTGTTCACGGGTGCATTG					PREDICTED: Mus musculus similar to 40S ribosomal protein S6 (LOC626259), mRNA.					
Mus musculus	RefSeq	ILMN_207439	ILMN_227666	PDS5A	NM_001081321.1	NM_001081321.1		71521	124486764	NM_001081321.1	Pds5a	NP_001074790.1	ILMN_1233060	004590168	S	3934	CCTTCCAAACCCCGGAGAGGACGTCGCCCCAAATCTGAATCTCAGGGCAA	5	-	66006661-66006710	5qC3.1	Mus musculus PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) (Pds5a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		E230024D05Rik; mKIAA0648; 9030416H16Rik	E230024D05Rik; mKIAA0648; 9030416H16Rik
Mus musculus	Riken	ILMN_202047	ILMN_202047	HBB-B1	ri|2510039D09|ZX00056J15|AK011053|630					AK011053	Hbb-b1		ILMN_1255462	004210739	S	81	AGGCTGCTGTCTCTGGCCAGTGGGGAAAGGTGAACGCCGATGAAGTTGGT						An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IMP]		
Mus musculus	RefSeq	ILMN_214245	ILMN_214245	OLFR291	NM_146415.1	NM_146415.1		258410	33238959	NM_146415.1	Olfr291	NP_666527.1	ILMN_2645882	003290451	S	588	GGCAGAAGTGCTTCTTTTAGTGATAGCAAGTATCTTTGGGGTTGGTGCTT	7	+	92005462-92005511	7qD3	Mus musculus olfactory receptor 291 (Olfr291), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR254-2	MOR254-2
Mus musculus	Riken	ILMN_205599	ILMN_205599	NCOA2	ri|A230062I11|PX00128J02|AK038781|2946					AK038781	Ncoa2		ILMN_2573793	003830079	S	2691	CCCGCTCTACAACTGAGTTGCAGGGGAGGCAGAGGGGCATAGCAAGACCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any series of molecular signals generated as a consequence of a steroid hormone binding to its receptor [goid 30518] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IGI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA];  [goid 30375] [evidence IDA];  [goid 30374] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215908	ILMN_215908	CDS1	NM_173370.3	NM_173370.3		74596	34328392	NM_173370.3	Cds1	NP_775546.2	ILMN_2919860	006270528	S	3682	AAGGCTGCCCCCACTTTTGTCCCTTTGCACTTTGAACAGAGGTCATGGCG	5	+	102252635-102252684	5qE4	Mus musculus CDP-diacylglycerol synthase 1 (Cds1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate [goid 16024] [evidence ISO]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol [goid 4605] [evidence ISO]	AI314024; AW125888; 4833409J18Rik	AI314024; AW125888; 4833409J18Rik
Mus musculus	RefSeq	ILMN_223371	ILMN_227885	CNTNAP2	NM_001004357.1	NM_001004357.1		66797	52138537	NM_001004357.1	Cntnap2	NP_001004357.1	ILMN_2763156	003370768	S	3013	CCGCTCCTTGAGGATGAATGGAGTAACACTTGACTTGGAAGAAAGGGCGA	6	+	46999228-46999277	6qB2.2-qB2.3	Mus musculus contactin associated protein-like 2 (Cntnap2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5430425M22Rik; mKIAA0868; Caspr2	5430425M22Rik; mKIAA0868; Caspr2
Mus musculus	RefSeq	ILMN_217274	ILMN_227885	CNTNAP2	NM_001004357.1	NM_001004357.1		66797	52138537	NM_001004357.1	Cntnap2	NP_001004357.1	ILMN_2681321	000620703	S	4627	GCATCTAGTCGACTTTTAATGGGCTGTTGTAGCAACTAGTTTGTGTCCAA	6	+	47249039-47249088	6qB2.2-qB2.3	Mus musculus contactin associated protein-like 2 (Cntnap2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5430425M22Rik; mKIAA0868; Caspr2	5430425M22Rik; mKIAA0868; Caspr2
Mus musculus	RefSeq	ILMN_209059	ILMN_227885	CNTNAP2	NM_001004357.1	NM_001004357.1		66797	52138537	NM_001004357.1	Cntnap2	NP_001004357.1	ILMN_2592150	006760427	S	6885	TCTTATATCCAGTGTATCATCCACCAAGCACAGACTAACGGAAAGCCCTG	6	+	47251297-47251346	6qB2.2-qB2.3	Mus musculus contactin associated protein-like 2 (Cntnap2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5430425M22Rik; mKIAA0868; Caspr2	5430425M22Rik; mKIAA0868; Caspr2
Mus musculus	RefSeq	ILMN_200595	ILMN_227885	CNTNAP2	NM_001004357.1	NM_001004357.1		66797	52138537	NM_001004357.1	Cntnap2	NP_001004357.1	ILMN_1214016	005420059	S	2205	CCATGGACCAGATTAGTGCCATCACCAGTAGCGCCGAGTACTGCGAACAG	6	+	46434033-46434082	6qB2.2-qB2.3	Mus musculus contactin associated protein-like 2 (Cntnap2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5430425M22Rik; mKIAA0868; Caspr2	5430425M22Rik; mKIAA0868; Caspr2
Mus musculus	RefSeq	ILMN_200587	ILMN_227885	CNTNAP2	NM_001004357.1	NM_001004357.1		66797	52138537	NM_001004357.1	Cntnap2	NP_001004357.1	ILMN_1230524	006550730	S	1537	TGACATCTCCTCAGGCTCCGGGCTGAATGATGGGCAGTGGCATGAGGTTC	6	+	45965474-45965487:46120169-46120204	6qB2.2-qB2.3	Mus musculus contactin associated protein-like 2 (Cntnap2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5430425M22Rik; mKIAA0868; Caspr2	5430425M22Rik; mKIAA0868; Caspr2
Mus musculus	Riken	ILMN_202055	ILMN_202055	NSEP1	ri|2610205I19|ZX00061B24|AK011890|1963					AK011890	Nsep1		ILMN_1218262	003310553	S	1649	GGTTTCAACATGGAGTTGTTCTTGGGACTTGGATGCTCAGGTCGTGGTGG										
Mus musculus	RefSeq	ILMN_213501	ILMN_213501	CDC25C	NM_009860.2	NM_009860.2		12532	122114544	NM_009860.2	Cdc25c	NP_033990.2	ILMN_2733046	002940554	S	741	CCGAATGCTATGAATCATGGCCACAGAAAGAAGATTGCAAAGCGTAGCAC	18	-	34906896-34906945	18qB1	Mus musculus cell division cycle 25 homolog C (S. pombe) (Cdc25c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through M phase, the part of the mitotic cell cycle during which mitosis takes place [goid 87] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cdc25	Cdc25
Mus musculus	RefSeq	ILMN_213501	ILMN_213501	CDC25C	NM_009860.2	NM_009860.2		12532	122114544	NM_009860.2	Cdc25c	NP_033990.2	ILMN_1252063	002320678	S	1653	CAGGGACAGATTGCCCTCCTGGTGAAGGGTGCGAGCCCACAATAGTGACT	18	-	34892889-34892894:34892895-34892938	18qB1	Mus musculus cell division cycle 25 homolog C (S. pombe) (Cdc25c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through M phase, the part of the mitotic cell cycle during which mitosis takes place [goid 87] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cdc25	Cdc25
Mus musculus	RefSeq	ILMN_221981	ILMN_221981	LY96	NM_016923.1	NM_016923.1		17087	8393736	NM_016923.1	Ly96	NP_058619.1	ILMN_2743003	007100674	S	487	GCTCTTCTGTTTGAATTTCACCATCATTCACCGCCGTGATGTCAATTAGA	1	+	16699570-16699618:16699619-16699619	1qA3	Mus musculus lymphocyte antigen 96 (Ly96), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MD-2; MD2; MGC151162; ESOP-1	MD-2; MD2; MGC151162; ESOP-1
Mus musculus	RefSeq	ILMN_200934	ILMN_200934	LOC384656	XM_357769.1	XM_357769.1			38087167	XM_357769.1	LOC384656		ILMN_1237962	001510601	S	3	GATGGGAAGGAGCACTGTAGTTCAGTGTGGGCTTGTCGGGAACTTCCAGG										
Mus musculus	RefSeq	ILMN_220183	ILMN_233729	FAM118A	NM_177067.2	NM_177067.2		73225	141801484	NM_177067.2	Fam118a	NP_796041.1	ILMN_1213728	003440246	S	553	ACCATGGTGCTGACCACCAACTACGACAACCTGCTGGAGATCTTCGGGCA	15	+	84878912-84878961	15qE2	Mus musculus family with sequence similarity 118, member A (Fam118a), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C230014M12Rik	C230014M12Rik
Mus musculus	MEEBO	ILMN_220791	ILMN_220791	BLNK	scl000448.1_1	NM_008528.3			31982208	NM_008528.3	Blnk		ILMN_1244526	004390661	S	1096	ATAGATCAACCAAGCCAAACAGTTCCTCAAAGCACATGTCGCCTCCAGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_219347	ILMN_219347	FOLR1	NM_008034.2	NM_008034.2		14275	31982844	NM_008034.2	Folr1	NP_032060.2	ILMN_2707541	000290458	S	580	CACGAACACAAGCCAGGAAGCACATAAGGACATTTCCTACCTGTACCGGT	7	-	109007986-109008035	7qE3	Mus musculus folate receptor 1 (adult) (Folr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane [goid 6620] [evidence TAS]; The chemical reactions and pathways involving folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 46655] [evidence IMP]	Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence TAS]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [evidence TAS]	FBP1; Folbp1; Folbp-1	FBP1; Folbp1; Folbp-1
Mus musculus	RefSeq	ILMN_219347	ILMN_219347	FOLR1	NM_008034.2	NM_008034.2		14275	31982844	NM_008034.2	Folr1	NP_032060.2	ILMN_3000679	004730674	S	913	CACCTTCTACTTCCCCACATCTGCTGCTCTGTGTGAGGAAATCTGGAGTC	7	-	109007168-109007217	7qE3	Mus musculus folate receptor 1 (adult) (Folr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane [goid 6620] [evidence TAS]; The chemical reactions and pathways involving folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 46655] [evidence IMP]	Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence TAS]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [evidence TAS]	FBP1; Folbp1; Folbp-1	FBP1; Folbp1; Folbp-1
Mus musculus	MEEBO	ILMN_190089	ILMN_190089	B230306G18RIK	scl0319842.1_35						B230306G18Rik		ILMN_2467078	002060768	S	2	AACCTGTGCCTAAGTTATTTAAATGAGTAGAAAGGATTGTTAAACAGTCA										
Mus musculus	RefSeq	ILMN_207516	ILMN_207516	SPNA2	XM_359378.1	XM_359378.1			38075497	XM_359378.1	Spna2		ILMN_2587932	004040066	I	39	CCTTCAGACCCGAGGTGACTACGTTGTAATGCTCTCTGCTTTGCCCTGCA						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213896	ILMN_213896	TCF15	NM_009328.2	NM_009328.2		21407	111185897	NM_009328.2	Tcf15	NP_033354.2	ILMN_1231030	007400176	S	583	CGCTCCGAGGGCCTCGGCGATGAACCTGGATCCCTGGTTTTCTCCAAGAA	2	+	151974484-151974506:151974507-151974533	2qG3	Mus musculus transcription factor 15 (Tcf15), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism [goid 16265] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process whose specific outcome is the progression of the paraxial mesoderm over time, from its formation to the mature structure. The paraxial mesoderm is the mesoderm located bilaterally adjacent to the notochord and neural tube [goid 48339] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IMP]; The process by which the anatomical structures of muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 48644] [evidence IMP]; The process by which the anatomical structures of the tail are generated and organized. Morphogenesis pertains to the creation of form. The tail is the hindmost part of some animals [goid 35121] [evidence IMP]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IMP]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; A organ system process carried out by any of the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange [goid 3016] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Meso1; bHLH-EC2	Meso1; bHLH-EC2
Mus musculus	Riken	ILMN_201922	ILMN_201922	4933432P15RIK	ri|4933432P15|PX00021N11|AK017029|847					AK017029	4933432P15Rik		ILMN_2545649	005220072	S	660	GCTCATTCGTGTTGTCTCGGTTTTCCATCCCCCCCGACAAAGCTGGCAGG										
Mus musculus	MEEBO	ILMN_223262	ILMN_223262	2400009B08RIK	scl35154.1.15_20	XM_358687.1			38089044	XM_358687.1	2400009B08Rik		ILMN_2761585	000160576	S	111	GCAGGACCATCCAAAGCAGATAGACTGGGAGACGCAGCGCAGATACACAG										
Mus musculus	RefSeq	ILMN_220211	ILMN_220211	OLFR763	NM_146862.1	NM_146862.1		258861	22203798	NM_146862.1	Olfr763	NP_667073.1	ILMN_2719151	001110093	S	862	TTTGTTTACACTCTGAGGAACAAGGAGGTCACAGGGGCCATGAGGCGGCT	10	+	128449204-128449253	10qD3	Mus musculus olfactory receptor 763 (Olfr763), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR269-2	MOR269-2
Mus musculus	RefSeq	ILMN_219787	ILMN_219787	NFX1	NM_023739.3	NM_023739.3		74164	110347528	NM_023739.3	Nfx1	NP_076228.2	ILMN_2713566	003440368	S	3304	AAAGGGAGACACAGACACGGCCGCCACCACCAATTCCTCATCACCGACAC	4	+	40971551-40971600	4qA5	Mus musculus nuclear transcription factor, X-box binding 1 (Nfx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45347] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1300017N15Rik; NFX.1; Tex42; 3000003M19Rik; TEG-42	1300017N15Rik; NFX.1; Tex42; 3000003M19Rik; TEG-42
Mus musculus	RefSeq	ILMN_208881	ILMN_208881	IL17B	NM_019508.1	NM_019508.1		56069	9507246	NM_019508.1	Il17b	NP_062381.1	ILMN_1252489	005130521	S	270	GGAACAGCTCCGAGCCAGCCAAGAAGAAATGTGAAGTCAATCTACAGCTG	18	+	61849971-61850020	18qE1	Mus musculus interleukin 17B (Il17b), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence ISO]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]	Zcyto7; 1700006N07Rik; 1110006O16Rik	Zcyto7; 1700006N07Rik; 1110006O16Rik
Mus musculus	RefSeq	ILMN_199969	ILMN_199969	LOC384128	XM_357440.1	XM_357440.1			38079311	XM_357440.1	LOC384128		ILMN_1249506	003370600	S	193	GAGCGGCTGATCCGAGTCCGGTGTAAATCTCCCCACAGGCCGCAGAGCAA										
Mus musculus	RefSeq	ILMN_216723	ILMN_216723	NXPH2	NM_008752.2	NM_008752.2		18232	142379890	NM_008752.2	Nxph2	NP_032778.1	ILMN_1251624	000610180	S	2345	GTTGTGTTAGGCTTGTATATGGTAGTCCGTCCATGCTTGGTATTTCTCCT	2	+	23257259-23257308	2qA3	Mus musculus neurexophilin 2 (Nxph2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	MGC124297; MGC124298	MGC124297; MGC124298
Mus musculus	RefSeq	ILMN_212426	ILMN_212426	RBM12	NM_029397.3	NM_029397.3		75710	114155119	NM_029397.3	Rbm12	NP_083673.3	ILMN_3104139	006840022	A	3153	CAGGTGAAGCCATGGTGGCCTTTGAATCTCGGGATGAAGCCACAGCTGCT	2	-	155921167-155921216	2qH1	Mus musculus RNA binding motif protein 12 (Rbm12), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	mKIAA0765; 9430070C08Rik; MGC30712; MGC38279; 5730420G12Rik; AI852903; SWAN	mKIAA0765; 9430070C08Rik; MGC30712; MGC38279; 5730420G12Rik; AI852903; SWAN
Mus musculus	Riken	ILMN_207409	ILMN_207409	LHX6	ri|G630055O13|PL00013O12|AK090339|1552					AK090339	Lhx6		ILMN_1250422	006250041	S	1462	GCAGTGGCAAGGATGTGTTACGGAGCAGGAACAAGGCACATGGACAGTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex [goid 21853] [evidence IMP]; The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain [goid 21799] [evidence IMP]; The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration [goid 21800] [evidence IMP]; The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell [goid 21884] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_211810	ILMN_211810	CCDC28A	NM_144820.3	NM_144820.3		215814	142354973	NM_144820.3	Ccdc28a	NP_659069.2	ILMN_2619718	006860564	S	430	GGAGATGGAGCGCGGCCTCCTCAGCCTGCTGAACGATTTCCACTCTGGAA	10	-	17944717-17944766	10qA3	Mus musculus coiled-coil domain containing 28A (Ccdc28a), mRNA.				1700009P13Rik; AI480677; MGC19351	1700009P13Rik; AI480677; MGC19351
Mus musculus	RefSeq	ILMN_245055	ILMN_245055	2600009E05RIK	NM_029832.1	NM_029832.1		77006	110350659	NM_029832.1	2600009E05Rik	NP_084108.1	ILMN_2874128	004560470	S	1021	CAGCCTGACTCCAGTCCTTCCTTGAGTGTATCCTGTGGCCTACATGTGTC				2qF1	Mus musculus RIKEN cDNA 2600009E05 gene (2600009E05Rik), mRNA. XM_925578 XM_925581 XM_925583 XM_994018 XM_994040 XM_994059 XM_994077				AI326138; 1110001I20Rik	AI326138; 1110001I20Rik
Mus musculus	RefSeq	ILMN_186807	ILMN_186807	TM9SF4	NM_133847.3	NM_133847.3		99237	118130852	NM_133847.3	Tm9sf4	NP_598608.2	ILMN_1220640	006560255	S	3419	AGTAGCAAGAGACCAAACTCACCTTGGGTGTAGGGGTCAGTAGCAGCCAC	2	+	153035723-153035772	2qH1	Mus musculus transmembrane 9 superfamily protein member 4 (Tm9sf4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU045326; AA986553; MGC117930; KIAA0255; B930079E06; mKIAA0255	AU045326; AA986553; MGC117930; KIAA0255; B930079E06; mKIAA0255
Mus musculus	RefSeq	ILMN_186807	ILMN_186807	TM9SF4	NM_133847.3	NM_133847.3		99237	118130852	NM_133847.3	Tm9sf4	NP_598608.2	ILMN_2977690	006400601	S	3645	CCACCAGGAATCAGGCTGGAGAAATGGGAGCCCAGAGAGTGGAGAGTGAT	2	+	153035949-153035998	2qH1	Mus musculus transmembrane 9 superfamily protein member 4 (Tm9sf4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU045326; AA986553; MGC117930; KIAA0255; B930079E06; mKIAA0255	AU045326; AA986553; MGC117930; KIAA0255; B930079E06; mKIAA0255
Mus musculus	RefSeq	ILMN_228066	ILMN_228066	APOA4	NM_007468.2	NM_007468.2		11808	110347472	NM_007468.2	Apoa4	NP_031494.2	ILMN_2834123	003460133	S	1336	CCTGGAGAAGAGCCTGAGGGAGAAGGTCAACTCCTTTATGAGCACCCTGG	9	+	46051211-46051260	9qA5.2	Mus musculus apolipoprotein A-IV (Apoa4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process of the innate immune response that takes place in the mucosal tissues [goid 2227] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; Any process that modulates the frequency, rate or extent of absorption of cholesterol into the blood, and the exclusion of other sterols from absorption [goid 30300] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	Apoa-4	Apoa-4
Mus musculus	RefSeq	ILMN_194229	ILMN_228066	APOA4	NM_007468.2	NM_007468.2		11808	110347472	NM_007468.2	Apoa4	NP_031494.2	ILMN_1250349	005560600	S	1496	TGAGCTGTCCCTGGTGCCCTCAGCCCATCACAGCAGCAGACACCTGTCCT	9	+	46051371-46051373:46051374-46051420	9qA5.2	Mus musculus apolipoprotein A-IV (Apoa4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process of the innate immune response that takes place in the mucosal tissues [goid 2227] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; Any process that modulates the frequency, rate or extent of absorption of cholesterol into the blood, and the exclusion of other sterols from absorption [goid 30300] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	Apoa-4	Apoa-4
Mus musculus	RefSeq	ILMN_201251	ILMN_201251	LOC382115	XM_356201.1	XM_356201.1			38090159	XM_356201.1	LOC382115		ILMN_1241650	006420168	S	674	CACTGGCTACCAAGAAAACCTCTGGCTTCAATGGGGAGCATCCTTCTCGG										
Mus musculus	MEEBO	ILMN_191057	ILMN_191057	SCL0001032.1_178	scl0001032.1_178	X03863.1			54636	X03863.1	scl0001032.1_178		ILMN_1249839	005690370	S	10	GACTGAAAAACGATTCTCTGCTGAGTGTCCTTCAAACTCACCTTGCAGCC										
Mus musculus	RefSeq	ILMN_210469	ILMN_210469	STMN2	NM_025285.2	NM_025285.2		20257	118130361	NM_025285.2	Stmn2	NP_079561.1	ILMN_1253304	003870095	S	1606	GGACTTTTACTCAAGCTGGTCTTTCTTCCCCAGTGTAGGGCAATCCTGCC	3	+	8561306-8561355	3qA1	Mus musculus stathmin-like 2 (Stmn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SCG10; AI159727; Scgn10; Stmb2	SCG10; AI159727; Scgn10; Stmb2
Mus musculus	RefSeq	ILMN_215514	ILMN_215514	DPYSL4	NM_011993.2	NM_011993.2		26757	34328210	NM_011993.2	Dpysl4	NP_036123.2	ILMN_2829935	002450634	S	2488	CATGCTGCTGTACCAGATGCCGGCCACCACCGGCCAAGCCTGATGTGAGT	7	+	138953032-138953081	7qF4	Mus musculus dihydropyrimidinase-like 4 (Dpysl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CRMP-3; Ulip4; AI173505; DPY4; Drp-4; Crmp3	CRMP-3; Ulip4; AI173505; DPY4; Drp-4; Crmp3
Mus musculus	RefSeq	ILMN_215514	ILMN_215514	DPYSL4	NM_011993.2	NM_011993.2		26757	34328210	NM_011993.2	Dpysl4	NP_036123.2	ILMN_2829937	007570561	S	2071	TCCTGAGCTTTCTGGGGGTCTTGGTGTAGGCAGGGTGGGCGTTTGCTGCT	7	+	138952615-138952664	7qF4	Mus musculus dihydropyrimidinase-like 4 (Dpysl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CRMP-3; Ulip4; AI173505; DPY4; Drp-4; Crmp3	CRMP-3; Ulip4; AI173505; DPY4; Drp-4; Crmp3
Mus musculus	RefSeq	ILMN_200779	ILMN_233436	LOC668978	XR_002277.1	XR_002277.1		668978	94406995	XR_002277.1	LOC668978		ILMN_1216230	000360176	S	920	CTGTCACTTTCAGCCCTGCTGGATGGCAAGGACGTCACAAGTACCGACCT	X	+	8114127-8114167:8116444-8116452		PREDICTED: Mus musculus similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (mVDAC1) (mVDAC5) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) (LOC668978), mRNA.					
Mus musculus	RefSeq	ILMN_191874	ILMN_250822	PLXNA4	XM_984204.1	XM_984204.1		243743	94377134	XM_984204.1	Plxna4	XP_989298.1	ILMN_1214617	004260102	S	10313	CCCTGATGGAATCCCTTGAGTAGACTGATGGCTATTAGAAAGTTGAGCAG				6qA3.3	PREDICTED: Mus musculus plexin A4, transcript variant 2 (Plxna4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 17154] [evidence IGI]		
Mus musculus	RefSeq	ILMN_195989	ILMN_250822	PLXNA4	XM_984204.1	XM_984204.1		243743	94377134	XM_984204.1	Plxna4	XP_989298.1	ILMN_2520582	000050100	S	10183	GGAGAGACTTTTTTGTTGTTGTCGTTTTGCTACAGATCATTGCTCTTCAA				6qA3.3	PREDICTED: Mus musculus plexin A4, transcript variant 2 (Plxna4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 17154] [evidence IGI]		
Mus musculus	RefSeq	ILMN_220430	ILMN_220430	ZFP768	NM_146202.1	NM_146202.1		233890	22122750	NM_146202.1	Zfp768	NP_666314.1	ILMN_2721919	000130609	S	1870	GACGAAATATTCTAGAAGATGGGTCAGGGTGCAGGAAGTCACATGCCCTC	7	-	134486636-134486685	7qF3	Mus musculus zinc finger protein 768 (Zfp768), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	BC026432; MGC31345	BC026432; MGC31345
Mus musculus	RefSeq	ILMN_221980	ILMN_250206	EFHC2	NM_028916.2	NM_028916.2		74405	142348726	NM_028916.2	Efhc2	NP_083192.1	ILMN_2742944	004760056	S	2202	GAAGACGTTTGGGTGGGAATGCCATCACCTATTCCTGTGAAATACGTTAG	X	-	16709442-16709491	XqA1.2	Mus musculus EF-hand domain (C-terminal) containing 2 (Efhc2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC159328; 4933407D04Rik; mRib72-2	MGC159328; 4933407D04Rik; mRib72-2
Mus musculus	RefSeq	ILMN_251347	ILMN_251347	TAAR8C	NM_001010840.1	NM_001010840.1		494546	58082074	NM_001010840.1	Taar8c	NP_001010840.1	ILMN_2983333	003140131	S	834	TGCATTGGTTGATGCTTTCATGGGCTTCATCACTCCTGCCTATGTCTATG	10	-	23820835-23820884	10qA4	Mus musculus trace amine-associated receptor 8C (Taar8c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]		
Mus musculus	RefSeq	ILMN_221987	ILMN_221987	JUNB	NM_008416.1	NM_008416.1		16477	6680511	NM_008416.1	Junb	NP_032442.1	ILMN_1220034	003120014	S	1497	CGCCCAGTCCTTCCACCTCGAGGTTTACATGGCCCCCTTCCAGCGTATTT	8	-	87501101-87501150	8qC3	Mus musculus Jun-B oncogene (Junb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_239049	ILMN_239049	D10BWG1379E	NM_001033258.1	NM_001033258.1		215821	85701755	NM_001033258.1	D10Bwg1379e	NP_001028430.1	ILMN_2781181	001510482	S	7874	GAAAATGGCTTTGAAATATAGAACCACTGAGGTCCCCCAGAGCCCTTACC	10	-	18277719-18277768	10qA3	Mus musculus DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed (D10Bwg1379e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	B930094H20Rik; mKIAA1244; 9630004D11	B930094H20Rik; mKIAA1244; 9630004D11
Mus musculus	RefSeq	ILMN_222882	ILMN_222882	ATXN7L2	NM_175183.2	NM_175183.2		72522	31340868	NM_175183.2	Atxn7l2	NP_780392.1	ILMN_2783940	002000047	S	2902	TCATTAACGAGAAAGTGCCTGCCCACTGCAACGGAGCCGCCAGCACCTCC	3	-	108330370-108330414:108330415-108330419	3qF2.3	Mus musculus ataxin 7-like 2 (Atxn7l2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2610528J18Rik	2610528J18Rik
Mus musculus	MEEBO	ILMN_219852	ILMN_219852	MDFI	scl49835.2_286	XM_147276.1			20900234	XM_147276.1	Mdfi		ILMN_2714423	004250020	S	523	GAGGGGCGCAATATGGAAAAGACTGGAAGGGGGTAGAGGGAGGGTCTGTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_213131	ILMN_213131	ITGA2	NM_008396.2	NM_008396.2		16398	41054730	NM_008396.2	Itga2	NP_032422.2	ILMN_2877796	007400554	S	3856	GGCTAGTCCAGCGTTTACCTTCTAACAGGGCGATGGGATACTTCTAGACA	13	-	115626432-115626481	13qD2.2	Mus musculus integrin alpha 2 (Itga2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD49B; DX5	CD49B; DX5
Mus musculus	MEEBO	ILMN_211470	ILMN_211470	4933435E02RIK	scl51565.3.1_268				51770825	XM_488844	4933435E02Rik		ILMN_2616219	004760563	S	1250	ACATTTTCATATTTGTCAGCCCCTGAATCCAACCAGATGGAGAACAGACA										
Mus musculus	RefSeq	ILMN_199347	ILMN_199347	LOC386486	XM_359329.1	XM_359329.1			38097319	XM_359329.1	LOC386486		ILMN_2534921	000830523	S	1290	GTCCTTAAACGGCCTCGCCATGTGCATTGCCACCTCTGTTGTCCAGACGG										
Mus musculus	RefSeq	ILMN_196181	ILMN_255245	ELK3	NM_013508.1	NM_013508.1		13713	7305022	NM_013508.1	Elk3	NP_038536.1	ILMN_2680318	001400196	S	2592	CCCAAGAAGGGCGTGGTGGGGAAACAAACTCAGAATGTTTTGGAAGATGC	10	-	92711633-92711682	10qC2	Mus musculus ELK3, member of ETS oncogene family (Elk3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Sap-2; D430049E23Rik; Etrp; Net; Erp	Sap-2; D430049E23Rik; Etrp; Net; Erp
Mus musculus	RefSeq	ILMN_196181	ILMN_255245	ELK3	NM_013508.1	NM_013508.1		13713	7305022	NM_013508.1	Elk3	NP_038536.1	ILMN_1224644	006130484	S	2249	GAGAGACCAAGCCGCTCAGCCGTTTGTAGAAGCCTTTCTACTTCCTGCAG	10	-	92711976-92712025	10qC2	Mus musculus ELK3, member of ETS oncogene family (Elk3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Sap-2; D430049E23Rik; Etrp; Net; Erp	Sap-2; D430049E23Rik; Etrp; Net; Erp
Mus musculus	RefSeq	ILMN_224359	ILMN_311941	4930432M17RIK	XR_035399.1	XR_035399.1		619318	149251849	XR_035399.1	4930432M17Rik		ILMN_3160731	006020661	S	672	GACACTCAGCCACTGTTGGGTGGACAAGGAAAACAATCATGCCATCACAG				3qG1	PREDICTED: Mus musculus RIKEN cDNA 4930432M17 gene (4930432M17Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_213084	ILMN_213084	CLCA4	NM_139148.1	NM_139148.1		229927	20982842	NM_139148.1	Clca4	NP_631887.1	ILMN_1257159	002190131	S	2665	GCACCCCTCCTGGTCTGGGTACCAAAGTGTCCGTACCCAGTTTGACAGTT	3	-	144485773-144485822	3qH2	Mus musculus chloride channel calcium activated 4 (Clca4), mRNA.					
Mus musculus	RefSeq	ILMN_215264	ILMN_215264	SLC17A8	NM_182959.2	NM_182959.2		216227	34328517	NM_182959.2	Slc17a8	NP_892004.1	ILMN_2806439	006060661	S	4157	GTGTGACCATGTCATCTGTGAAGAGTGTTGTGTCATTTCATGCATTGGCC	10	-	89037010-89037059	10qC2	Mus musculus solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8 (Slc17a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IDA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid [goid 5313] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	Vglut3; BC042593	Vglut3; BC042593
Mus musculus	RefSeq	ILMN_223699	ILMN_223699	9230110C19RIK	NM_199017.2	NM_199017.2		234912	141802300	NM_199017.2	9230110C19Rik	NP_950182.1	ILMN_2767819	002940438	S	1291	GTCTCTGGATTAGAATAGAAACATTAAACATCTCCACCACCAGCCATTAA	9	-	8021923-8021972	9qA1	Mus musculus RIKEN cDNA 9230110C19 gene (9230110C19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_261087	ILMN_261087	KNS2	NM_001025360.1	NM_001025360.1		16593	70909299	NM_001025360.1	Kns2	NP_001020531.1	ILMN_3042059	004060520	I	2114	ACACCTCTAGTAGGGTCTTGGAGAGCCACTCTCAGTCAGCAAGGGTGGTG	12	+	112254300-112254349	12qF1	Mus musculus kinesin 2 (Kns2), transcript variant d, mRNA.				KLC1T; Klc1; AI874768; 60/70kDa	KLC1T; Klc1; AI874768; 60/70kDa
Mus musculus	RefSeq	ILMN_261087	ILMN_261087	KNS2	NM_001025360.1	NM_001025360.1		16593	70909299	NM_001025360.1	Kns2	NP_001020531.1	ILMN_3116826	004050133	A	1538	CAGAGACATTGGAAGAAGCCGCCATGAGGTCACGTAAGCAGGGTCTTGAC	12	+	112235366-112235404:112237133-112237143	12qF1	Mus musculus kinesin 2 (Kns2), transcript variant d, mRNA.				KLC1T; Klc1; AI874768; 60/70kDa	KLC1T; Klc1; AI874768; 60/70kDa
Mus musculus	Riken	ILMN_205377	ILMN_205377	D130027A21RIK	ri|D130027A21|PX00183N24|AK051268|1800					AK051268	D130027A21Rik		ILMN_1249683	004200301	S	404	CTGGCATGATGTGCAGGTCTCTACTGCCTACAAGAAGACTCAAGAAACTC										
Mus musculus	Riken	ILMN_204908	ILMN_204908	C130058C04RIK	ri|C130058C04|PX00170M21|AK048409|4239					AK048409	C130058C04Rik		ILMN_1259258	006840736	S	3965	CTTGGTGTGCAAGGCAGGAAGATGAACATGAGATCAGGCCTAGCCTGGGC										
Mus musculus	RefSeq	ILMN_213875	ILMN_213875	1110002H13RIK	NM_025376.2	NM_025376.2		66139	142347300	NM_025376.2	1110002H13Rik	NP_079652.1	ILMN_1250757	004570707	S	770	CCGCCAAGCTGACCTTCTCCACCCTCTGCTGCACTTGTGTCTGACTATAC	2	-	26917700-26917707:26917708-26917749	2qA3	Mus musculus RIKEN cDNA 1110002H13 gene (1110002H13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI131587; RP23-449M10.5	AI131587; RP23-449M10.5
Mus musculus	Riken	ILMN_205572	ILMN_205572	A330043C08RIK	ri|A330043C08|PX00131F05|AK039440|776					AK039440	A330043C08Rik		ILMN_1235968	000110095	S	473	GTCAGGGACACTGGAGGGAACCCAGGAACTGTGGCTGAGGAGGGGTATAT										
Mus musculus	RefSeq	ILMN_223213	ILMN_223213	TBX22	NM_181319.2	NM_181319.2		245572	31343182	NM_181319.2	Tbx22	NP_851836.1	ILMN_2760848	001400553	S	17	GGCAAGCAGTTCGAAAAAAATCAGGAGAAATGCCTTAGCCTCAAGGTGGA	X	+	103881698-103881747	XqD	Mus musculus T-box 22 (Tbx22), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	D230020M15Rik	D230020M15Rik
Mus musculus	RefSeq	ILMN_223213	ILMN_223213	TBX22	NM_181319.2	NM_181319.2		245572	31343182	NM_181319.2	Tbx22	NP_851836.1	ILMN_3158803	002690088	A	1062	TCCTCCTAATGGCTGTTATAGGTACACCATCTCCATGCCACCTAGACTGG	X	+	103888024-103888073	XqD	Mus musculus T-box 22 (Tbx22), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	D230020M15Rik	D230020M15Rik
Mus musculus	MEEBO	ILMN_191076	ILMN_191076	SCL0002812.1_82	scl0002812.1_82						scl0002812.1_82		ILMN_2475886	006660301	S	13	CCTTCATGTATATTGATGGCGGCCCTTGCTGTATCTAGTATCCAAAGGTC										
Mus musculus	RefSeq	ILMN_216483	ILMN_216483	OLFR201	NM_146994.2	NM_146994.2		258996	121583931	NM_146994.2	Olfr201	NP_667205.2	ILMN_1224626	004120278	S	830	TTTATACAGTCATAATTCCTCTGCTCAACCCATTTGTTTACAGTCTGAGA	16	-	59268612-59268661	16qC1.3	Mus musculus olfactory receptor 201 (Olfr201), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR182-2	MOR182-2
Mus musculus	Riken	ILMN_206581	ILMN_206581	D930007B01RIK	ri|D930007B01|PX00200C18|AK086117|2112					AK086117	D930007B01Rik		ILMN_2581154	006650706	S	1202	GGCCCATGGTAAGACTCCCATGAAACAACTCAGTATTTGGACTGTTTTTG										
Mus musculus	RefSeq	ILMN_211642	ILMN_211642	RARG	NM_011244.3	NM_011244.3		19411	112181201	NM_011244.3	Rarg	NP_035374.3	ILMN_3055801	005420360	I	370	CCAGGGCAGTGGGCATGGGCGGGGGCTGTAGCTGAAGACCACCCCCGCCT	15	-	102083070-102083119	15qF3	Mus musculus retinoic acid receptor, gamma (Rarg), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10552] [evidence IC ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43068] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a retinoid X receptor [goid 46965] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MGC18523; AI385767; MGC11555; RARD; Nr1b3; RARgamma2	MGC18523; AI385767; MGC11555; RARD; Nr1b3; RARgamma2
Mus musculus	RefSeq	ILMN_211642	ILMN_211642	RARG	NM_011244.3	NM_011244.3		19411	112181201	NM_011244.3	Rarg	NP_035374.3	ILMN_3132660	005810044	A	2776	GCTGCCAAATAAGATTCCTGCAGGCTCCCCCATTTCTCTGGGGGGTTAGG	15	-	102065462-102065511	15qF3	Mus musculus retinoic acid receptor, gamma (Rarg), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10552] [evidence IC ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43068] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a retinoid X receptor [goid 46965] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MGC18523; AI385767; MGC11555; RARD; Nr1b3; RARgamma2	MGC18523; AI385767; MGC11555; RARD; Nr1b3; RARgamma2
Mus musculus	RefSeq	ILMN_211642	ILMN_211642	RARG	NM_011244.3	NM_011244.3		19411	112181201	NM_011244.3	Rarg	NP_035374.3	ILMN_2618068	000620240	S	2151	GCCTTTTCCTCTGCCAGGTGCTTGGGCCTCTGGGAGCAAACAGGAACACT	15	-	102066087-102066136	15qF3	Mus musculus retinoic acid receptor, gamma (Rarg), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10552] [evidence IC ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43068] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a retinoid X receptor [goid 46965] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MGC18523; AI385767; MGC11555; RARD; Nr1b3; RARgamma2	MGC18523; AI385767; MGC11555; RARD; Nr1b3; RARgamma2
Mus musculus	RefSeq	ILMN_188485	ILMN_188485	YPEL3	NM_025347.1	NM_025347.1		66090	21313615	NM_025347.1	Ypel3	NP_079623.1	ILMN_3132898	004880537	A	872	CTCCCACTGGATCCCTCTTACCTGCAACGTGTCTGTTCTCGTTCTGTAGC	7	+	126571581-126571630	7qF3	Mus musculus yippee-like 3 (Drosophila) (Ypel3), mRNA.				0610043B10Rik; Suap; 1190001G19Rik	0610043B10Rik; Suap; 1190001G19Rik
Mus musculus	Riken	ILMN_202981	ILMN_202981	LAMA2	ri|5830440B04|PX00039P14|AK030879|2742					AK030879	Lama2		ILMN_2553806	000110538	S	2521	ACTGAAGATATATGATTGCAAGGTGCTCATATTCAGAAAGTGGGTTGTAA						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]; Any process that activates, maintains or increases the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 32224] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210077	ILMN_210077	TIAF2	scl48034.1.1_281	NM_153061.1			23346452	NM_153061.1	Tiaf2		ILMN_2601983	003400301	S	1779	CTAGGGGTCCAGGAAGCATAGAAACACCAGGTGCTTGGAACATTTGGGTA										
Mus musculus	RefSeq	ILMN_209175	ILMN_209175	STAT6	NM_009284.2	NM_009284.2		20852	128485773	NM_009284.2	Stat6	NP_033310.2	ILMN_2593254	003830382	S	200	TACAGACCCATGGGGCTTGGTAGTGCCCTCTGAGAGAGGGAGAAGATAGC	10	+	127080241-127080290	10qD3	Mus musculus signal transducer and activator of transcription 6 (Stat6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents, or reduces the frequency, rate, or extent of a T-helper 2 type immune response [goid 2829] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgE isotypes [goid 48295] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209175	ILMN_209175	STAT6	NM_009284.2	NM_009284.2		20852	128485773	NM_009284.2	Stat6	NP_033310.2	ILMN_2897230	003940161	S	3687	GCTCTTACCCAGTCCTTTTTCCCTCACTGGAGGGGAAGGGGGCCATGGAT	10	+	127097925-127097974	10qD3	Mus musculus signal transducer and activator of transcription 6 (Stat6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents, or reduces the frequency, rate, or extent of a T-helper 2 type immune response [goid 2829] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgE isotypes [goid 48295] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_213099	ILMN_213099	0610010D24RIK	scl068339.1_91				47087141	NM_026681	0610010D24Rik		ILMN_1237980	007510674	S	971	GCCAGCATTTGAAGTAGGCTGTAGATGTCATTCGTTGCATTTAGAGGCCC										
Mus musculus	Riken	ILMN_203581	ILMN_203581	GPR106	ri|A230094D06|PX00129P02|AK039086|1307					AK039086	Gpr106		ILMN_1223440	000670746	S	1112	CAGGACAGCGGGTCTGATCTGGGGCCATTTGTTTAGTTGCACAGATCTCC										
Mus musculus	RefSeq	ILMN_196842	ILMN_196842	LOC218165	XM_154052.1	XM_154052.1			20894535	XM_154052.1	LOC218165		ILMN_1241429	001740132	S	136	AGATCTGGGGGAGGGATACAGAGCTCTTTCAAAACTCAGCTGTTCACAGC										
Mus musculus	RefSeq	ILMN_201474	ILMN_314195	LOC100040755	XR_032249.1	XR_032249.1		100040755	149264842	XR_032249.1	LOC100040755		ILMN_2542428	002970438	S	93	GGCGATGAAGGAGACACCAGACCAACAAAGAAGGAGGAGGGAATCCTTTC	14	+	3315239-3315288	14qA1	PREDICTED: Mus musculus similar to Predicted gene, EG545013 (LOC100040755), misc RNA.					
Mus musculus	RefSeq	ILMN_200707	ILMN_320056	EG381818	XR_035022.1	XR_035022.1		381818	149255447	XR_035022.1	EG381818		ILMN_1249932	000240561	S	386	AGCAAAGACCCCCTCAGCCTGGAAATCAACAAGGCCCACCCCCACAGGGA	6	-	132389469-132389518	6qG1	PREDICTED: Mus musculus predicted gene, EG381818 (EG381818), misc RNA.					
Mus musculus	RefSeq	ILMN_221094	ILMN_246006	DHRS7C	NM_001013013.1	NM_001013013.1		68460	67625740	NM_001013013.1	Dhrs7c	NP_001013031.1	ILMN_2731035	004780564	S	211	GGTCGAAGTCTGCCGTGCAGAACAAAGTGGTGGTCATCACAGATGCCATC	11	+	67612216-67612257:67612258-67612265	11qB3	Mus musculus dehydrogenase/reductase (SDR family) member 7C (Dhrs7c), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP23-338M9.5; AI120487; 1110001P11Rik	RP23-338M9.5; AI120487; 1110001P11Rik
Mus musculus	Riken	ILMN_202764	ILMN_202764	B230217N24RIK	ri|B230217N24|PX00070I23|AK021006|903					AK021006	B230217N24Rik		ILMN_1247090	006400546	S	833	AGAGAGGGTCAGGCCCAGCCTAGGTTCAGTCCTCCAGGATACAACTGTCC										
Mus musculus	RefSeq	ILMN_222474	ILMN_222474	CSF2RB2	NM_007781.2	NM_007781.2		12984	118131167	NM_007781.2	Csf2rb2	NP_031807.1	ILMN_2750047	005820528	S	4145	CGAACCTTGAACAGGATGTGATAACTTTTCTAGACCACATGCTTGCTCTG	15	-	78113364-78113413	15qE1	Mus musculus colony stimulating factor 2 receptor, beta 2, low-affinity (granulocyte-macrophage) (Csf2rb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence IEA];  [goid 4896] [evidence IEA]	Il3rb; AIC2A; Csfgmrb; Bil3; Il3r; BetaIl3; Il3rb2	Il3rb; AIC2A; Csfgmrb; Bil3; Il3r; BetaIl3; Il3rb2
Mus musculus	RefSeq	ILMN_201230	ILMN_201230	LOC382092	XM_356174.1	XM_356174.1			38089994	XM_356174.1	LOC382092		ILMN_1259528	002260544	S	456	TGACAGAATTCCAGACCAACCTGGTACCCGGTGGTGACCTGGCCAAGGTG										
Mus musculus	Riken	ILMN_203668	ILMN_203668	9530027L17RIK	ri|9530027L17|PX00111B20|AK035382|2952					AK035382	9530027L17Rik		ILMN_2559059	006520307	S	2694	TCTAGATCAGGTTGACTGAGCTGAGGGAGCACACCTTCACCATGGGGAGG										
Mus musculus	RefSeq	ILMN_222539	ILMN_222539	SLC37A2	NM_020258.3	NM_020258.3		56857	142373673	NM_020258.3	Slc37a2	NP_064654.2	ILMN_2751120	003370138	S	3733	GGCTGGAGGTGTAAGAAGAGGGTTGGAGAAAACCCCAAAGGCTGAGGATC	9	-	37037006-37037055	9qA4	Mus musculus solute carrier family 37 (glycerol-3-phosphate transporter), member 2 (Slc37a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 6072] [evidence ISA]; The process of transferring reducing equivalents from the cytosol into the mitochondria; NADH is used to synthesise glycerol 3-phosphate in the cytosol; this compound is then transported into the mitochondria where it is converted to dihydroxyacetone phosphate (DHAP) using FAD; DHAP then returns to the cytosol to complete the cycle [goid 6127] [evidence ISA]; The directed movement of glycerol-3-phosphate into, out of, within or between cells. Glycerol-3-phosphate is a phosphoric monoester of glycerol [goid 15794] [evidence ISA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of glycerol-3-phosphate from one side of the membrane to the other. Glycerol-3-phosphate is a phosphoric monoester of glycerol [goid 15169] [evidence ISA]	Slc37a1; ci2; G3PP; cI-2	Slc37a1; ci2; G3PP; cI-2
Mus musculus	Riken	ILMN_207219	ILMN_207219	D730003L24RIK	ri|D730003L24|PX00673F05|AK085665|4234					AK085665	D730003L24Rik		ILMN_1237879	007650184	S	3988	GCCCTGAGGCTGGAGACAGGATGGTATTTTAGAAGGGTGGGAGGTCCCCA										
Mus musculus	MEEBO	ILMN_223092	ILMN_223092	4932702F08RIK	scl074410.2_34	XM_130221.2			38074625	XM_130221.2	4932702F08Rik		ILMN_2759244	006200482	S	2457	CAGGGGACCCCTGCAACGGTGGGGGACTGACCCAATGGCCAAGAGCCACT										
Mus musculus	Riken	ILMN_201765	ILMN_201765	2500004H21RIK	ri|2500004H21|ZX00052D06|AK010874|1261					AK010874	2500004H21Rik		ILMN_1252767	002850307	S	911	AGGCGATGTGGCCGGCTTGCTGCTCAGAGGTTGAGCGTTTGCTAGTATGC										
Mus musculus	Riken	ILMN_204046	ILMN_204046	DCAMKL1	ri|A830044L14|PX00155G22|AK043874|1725					AK043874	Dcamkl1		ILMN_1259689	006040022	S	1566	GGCCTCAGGTTTACTGTGTATCTCTATCTCAAAGCGGAGAGTGGCAAACC										
Mus musculus	Riken	ILMN_207169	ILMN_207169	F830008I11RIK	ri|F830008I11|PL00004J16|AK089681|4063					AK089681	F830008I11Rik		ILMN_2585565	005390538	S	3527	CCACTCAGCCAGTCAAGCAACTAACCAACTAACCAAGCAGGCAGACAACC										
Mus musculus	RefSeq	ILMN_188673	ILMN_245695	PPM1K	NM_175523.4	NM_175523.4		243382	118130282	NM_175523.4	Ppm1k	NP_780732.1	ILMN_2488510	002490524	S	2517	CAAACATGTCAGCTTGCTATGTAAATTAGGGGTGTAAAACCACACTCCTT	6	-	57459489-57459538	6qB3	Mus musculus protein phosphatase 1K (PP2C domain containing) (Ppm1k), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC115965; A930026L03Rik; PP2Cm; 2900063A19Rik	MGC115965; A930026L03Rik; PP2Cm; 2900063A19Rik
Mus musculus	RefSeq	ILMN_245695	ILMN_245695	PPM1K	NM_175523.4	NM_175523.4		243382	118130282	NM_175523.4	Ppm1k	NP_780732.1	ILMN_2923615	005910632	S	5292	CAGATGTGTCCCACCACTGAGAGCGAGTGACCTGTGGTTGGGTTCCAGTG	6	-	57456714-57456763	6qB3	Mus musculus protein phosphatase 1K (PP2C domain containing) (Ppm1k), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC115965; A930026L03Rik; PP2Cm; 2900063A19Rik	MGC115965; A930026L03Rik; PP2Cm; 2900063A19Rik
Mus musculus	RefSeq	ILMN_188673	ILMN_245695	PPM1K	NM_175523.4	NM_175523.4		243382	118130282	NM_175523.4	Ppm1k	NP_780732.1	ILMN_2454710	001980356	S	4982	GAGTTAAATAAACTCTAGCCATGTGTTTGTGTTTTCCATTACTGTGAGGG	6	-	57457024-57457073	6qB3	Mus musculus protein phosphatase 1K (PP2C domain containing) (Ppm1k), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC115965; A930026L03Rik; PP2Cm; 2900063A19Rik	MGC115965; A930026L03Rik; PP2Cm; 2900063A19Rik
Mus musculus	RefSeq	ILMN_197775	ILMN_197775	LOC381018	XM_354924.1	XM_354924.1			38077932	XM_354924.1	LOC381018		ILMN_2529316	000780379	S	190	CAGCAGATGATTGTCAAGCTGGGCGACAAGAAACGCCTCAATAATGCGCC										
Mus musculus	RefSeq	ILMN_220702	ILMN_220702	IKBKE	NM_019777.3	NM_019777.3		56489	142379783	NM_019777.3	Ikbke	NP_062751.2	ILMN_3161543	006130767	S	2731	GGCTACCACAGCCTTATCAAGACACCAAGACTGTTCTTCCTCACCCAGGC	1	-	133151601-133151650	1qE4	Mus musculus inhibitor of kappaB kinase epsilon (Ikbke), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + IkappaB protein = ADP + IkappaB phosphoprotein [goid 8384] [evidence IDA]	AW558201; IKKepsilon; Ikki; IKK-i	AW558201; IKKepsilon; Ikki; IKK-i
Mus musculus	RefSeq	ILMN_198794	ILMN_260679	LOC620641	XR_003165.1	XR_003165.1		620641	94382470	XR_003165.1	LOC620641		ILMN_1245916	006060653	S	1111	GGCTATGGTTGCTGTAGAAGTATTGTGTATCTTGGCATCAAGTGCAGGGC				7qD3	PREDICTED: Mus musculus similar to putative pheromone receptor (Go-VN3) (LOC620641), mRNA.					
Mus musculus	RefSeq	ILMN_210410	ILMN_210410	OLFR174	NM_147002.2	NM_147002.2		259004	121583640	NM_147002.2	Olfr174	NP_667213.2	ILMN_2605366	001450685	S	882	TCGACCAAGTTCTATCAACGAAGGAAATGAAGACATACCTGTTGCTATTT	16	-	58823704-58823753	16qC1.2	Mus musculus olfactory receptor 174 (Olfr174), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR184-1	MOR184-1
Mus musculus	MEEBO	ILMN_224250	ILMN_224250	S100A14	scl22946.3.1_72				13384775	NM_025393	S100a14		ILMN_2777308	002760356	S	391	GAAGCAGCCAAGAGTGTGAAGATGGAGAGGCCTGTTACTCGGAGCTGAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_212723	ILMN_212723	PLA2G1BR	scl018779.1_284				6679364	NM_008867	Pla2g1br		ILMN_2771164	004490376	S	5458	GTGAAGATCTGAATTGTGCTCCCATTAGAACCAAACTAAACAAGATGTTG										
Mus musculus	RefSeq	ILMN_210283	ILMN_210283	SHANK3	NM_021423.2	NM_021423.2		58234	71896542	NM_021423.2	Shank3	NP_067398.2	ILMN_3163115	004040195	A	5068	GACCATGAGATCGAAGGCGCACACCTGCCTGCGCTCACCAAGGAAGACTT	15	+	89388629-89388678	15qE3	Mus musculus SH3/ankyrin domain gene 3 (Shank3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IGI]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI841104; Shank3b	AI841104; Shank3b
Mus musculus	Riken	ILMN_202516	ILMN_202516	5330408M12RIK	ri|5330408M12|PX00053K20|AK017238|1516					AK017238	5330408M12Rik		ILMN_1242642	004880341	S	1091	GGAACAACGTACCAGCAAAATGTGAGTGTGACTCTGTTTGCTAGACAGCC										
Mus musculus	RefSeq	ILMN_198011	ILMN_198011	LOC333818	XM_289916.2	XM_289916.2			38080284	XM_289916.2	LOC333818		ILMN_1244672	000150187	S	3333	GGATAAGATCAAAAATTCGGGTGACAGCAGATGCTGGCGTGGATGTGGAG										
Mus musculus	RefSeq	ILMN_210524	ILMN_210524	GNGT2	NM_023121.2	NM_023121.2		14710	113461991	NM_023121.2	Gngt2	NP_075610.1	ILMN_3154581	005720615	A	410	AAGGCACTTGTGTGCTAAGCTGATGGCCCACCCTCACCACCATCACCCTC	11	+	95706900-95706922:95706923-95706949	11qD	Mus musculus guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2 (Gngt2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AV096488	AV096488
Mus musculus	Riken	ILMN_206020	ILMN_206020	C230081J16RIK	ri|C230081J16|PX00176P12|AK048919|1493					AK048919	C230081J16Rik		ILMN_1237515	006860477	S	960	CGTCAGTGGACATGAAGCTGTTTGTATGGCAGGTGCCTCAGCCAGGAACC										
Mus musculus	RefSeq	ILMN_194114	ILMN_194114	ZFP628	NM_170759.2	NM_170759.2		232816	148276993	NM_170759.2	Zfp628	NP_739565.2	ILMN_2503508	002690601	S	3149	GGACAGAAACTCCTTATCATTCGTAGCGCCCCAGCTACTGATCTGCTAGA				7qA1	Mus musculus zinc finger protein 628 (Zfp628), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Zec	Zec
Mus musculus	RefSeq	ILMN_201456	ILMN_201456	LOC385200	XM_358114.1	XM_358114.1			38093977	XM_358114.1	LOC385200		ILMN_1226733	000780278	S	296	GCACAGTGGAGCATTGTGGCACCACATGGGAGCATTTAAAAACCAGAAGG										
Mus musculus	MEEBO	ILMN_217722	ILMN_217722	D930025H04	scl0328370.5_130	NM_177815.2			31342951	NM_177815.2	D930025H04		ILMN_1248688	006900102	S	1736	TCCAAGCTCCACAGGACAATCATGGCCAAATGTGTACCAGGCAGTGACAC										
Mus musculus	RefSeq	ILMN_201964	ILMN_218890	NCAPH2	NM_025795.4	NM_025795.4		52683	153792291	NM_025795.4	Ncaph2	NP_080071.3	ILMN_2545978	004780703	S	1541	CCCTGATGCGTTGGCTCAGCTCTGTCTCCTGGATAAACTTCTGGGAGGTG				15qE3	Mus musculus non-SMC condensin II complex, subunit H2 (Ncaph2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]		D15Ertd785e; AI255179; 2610524G04Rik; 0610010J20Rik; MGC6766	D15Ertd785e; AI255179; 2610524G04Rik; 0610010J20Rik; MGC6766
Mus musculus	RefSeq	ILMN_218890	ILMN_218890	NCAPH2	NM_025795.4	NM_025795.4		52683	153792291	NM_025795.4	Ncaph2	NP_080071.3	ILMN_2745532	003890553	S	1869	GAGTGGACAGCACTGAGGCAGGGGTGGAAAGTAGTATATACCTGGAGGTC				15qE3	Mus musculus non-SMC condensin II complex, subunit H2 (Ncaph2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]		D15Ertd785e; AI255179; 2610524G04Rik; 0610010J20Rik; MGC6766	D15Ertd785e; AI255179; 2610524G04Rik; 0610010J20Rik; MGC6766
Mus musculus	MEEBO	ILMN_185877	ILMN_185877	DCBLD2	scl49013.18_61				27476056	NM_028523	Dcbld2		ILMN_2665736	004540328	S	2410	GGGACCCAGCCTCACGCTTTAGTGGGAACTTACAACACTCTTCTCTCCAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]			
Mus musculus	RefSeq	ILMN_198390	ILMN_198390	LOC381200	XM_355131.1	XM_355131.1			38084806	XM_355131.1	LOC381200		ILMN_2531515	001110239	S	107	AGTCTAGGTTCTGGGTCAGCCTCTGGTTTGGTACAGGTGCGTCCTGAGGT										
Mus musculus	RefSeq	ILMN_238978	ILMN_238978	OLFR873	NM_146561.1	NM_146561.1		258554	49170043	NM_146561.1	Olfr873	NP_666772.1	ILMN_3160657	002360403	S	716	CATCGAAAGGTGGGAGGTATAAAGCCTTCTCTACCTGTGGGTCTCATCTG	9	+	20105370-20105419	9qA3	Mus musculus olfactory receptor 873 (Olfr873), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR145-2	MOR145-2
Mus musculus	MEEBO	ILMN_210008	ILMN_210008	PTCD2	scl0003710.1_15	XM_127497.2			23601696	XM_127497.2	Ptcd2		ILMN_2618794	000940343	S	1162	CCATTTCCCTGGTCTGGAGCAGCTGCTGCTACAGTGGATTACTGGCTGCT										
Mus musculus	RefSeq	ILMN_215141	ILMN_314671	9830123M21RIK	XM_001478294.1	XM_001478294.1		226438	149234274	XM_001478294.1	9830123M21Rik	XP_001478344.1	ILMN_1227447	001340543	S	4110	GGTGGTGCATGGGGTGGAAGCTGAGCCCACTGTGACCAGAGGAATGGAAA	1	-	137850245-137850294	1qE4	PREDICTED: Mus musculus RIKEN cDNA 9830123M21 gene (9830123M21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214754	ILMN_214754	IFNGR1	NM_010511.2	NM_010511.2		15979	111154110	NM_010511.2	Ifngr1	NP_034641.1	ILMN_2651575	001030152	S	1551	GAGCTGTCCTAAGGTCTCCCGAGGCCTGCTGGTGGTAAAGAAACTGACCT	10	+	19329483-19329494:19329495-19329532	10qA3	Mus musculus interferon gamma receptor 1 (Ifngr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 19955] [evidence IEA]	Ifgr; CD119; IFN-gammaR; IFN-gamma R; Nktar; Ifngr	Ifgr; CD119; IFN-gammaR; IFN-gamma R; Nktar; Ifngr
Mus musculus	RefSeq	ILMN_215358	ILMN_215358	SDCCAG8	NM_029756.1	NM_029756.1		76816	29789244	NM_029756.1	Sdccag8	NP_084032.1	ILMN_2794335	005390593	S	3092	GGGCATCGTATCTCATTACAGATGGTTGTGAGCCACCATGTGCTTCCTGG				1qH4	Mus musculus serologically defined colon cancer antigen 8 (Sdccag8), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]			Cccap; 2700048G21Rik; 5730470G24Rik	Cccap; 2700048G21Rik; 5730470G24Rik
Mus musculus	RefSeq	ILMN_208754	ILMN_231112	IGH-V	XM_987203.1	XM_987203.1		16049	94394526	XM_987203.1	Igh-V	XP_992297.1	ILMN_2589186	003940020	S	188	GCCTTGAGTGGATTGGAGTAATTAATCCTAACTATGGTACTACTAGCTAC					PREDICTED: Mus musculus immunoglobulin heavy chain variable region (Igh-V), mRNA.					
Mus musculus	RefSeq	ILMN_191117	ILMN_196741	H2-D1	NM_010380.3	NM_010380.3		14964	133778954	NM_010380.3	H2-D1	NP_034510.3	ILMN_2476267	006450682	S	1084	TGTCTCTCCGAGATTGTAAAGCGTGAAGACAGCTGCCTGGACTGTACTGA	17	+	35401797-35401846	17qB1	Mus musculus histocompatibility 2, D region locus 1 (H2-D1), mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MHC B7.2; H2-D; H-2D	MHC B7.2; H2-D; H-2D
Mus musculus	RefSeq	ILMN_189607	ILMN_196741	H2-D1	NM_010380.3	NM_010380.3		14964	133778954	NM_010380.3	H2-D1	NP_034510.3	ILMN_2462745	006760390	S	954	GCTGTTCTGGGTGTCCTTGGAGCTATGGCCATCATTGGAGCTGTGGTGGC	17	+	35401477-35401525:35401716-35401716	17qB1	Mus musculus histocompatibility 2, D region locus 1 (H2-D1), mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MHC B7.2; H2-D; H-2D	MHC B7.2; H2-D; H-2D
Mus musculus	MEEBO	ILMN_211333	ILMN_211333	DAB2IP	scl0003119.1_44				48675374	NM_001001602	Dab2ip		ILMN_2615557	003290594	S	6240	AAGGTTGGATCGGCCGGAGCCCTTTCCTCCAGTCGAGACTTTTAACCCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_192392	ILMN_252294	VPS36	NM_027338.1	NM_027338.1		70160	30794415	NM_027338.1	Vps36	NP_081614.1	ILMN_1240149	003120373	S	1206	GCTTGCATTTTGCCAAGGTCTCACGACACTGAGCTAAGAGATAAACCCAA	8	+	23328998-23329047	8qA2	Mus musculus vacuolar protein sorting 36 (yeast) (Vps36), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence IC ]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [evidence IDA]	1700010A24Rik; 2810408E15Rik; 2210415M20Rik; Eap45	1700010A24Rik; 2810408E15Rik; 2210415M20Rik; Eap45
Mus musculus	Riken	ILMN_204058	ILMN_204058	PTPRS	ri|A130084H05|PX00125L09|AK038176|4549					AK038176	Ptprs		ILMN_2562039	000060594	S	4279	AAAGTTGATGGGTCTGGATCGGCAGTACTTGGGAGAGAGGCAGAGGCAGG								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196649	ILMN_196649	BC035522	XM_355513.1	XM_355513.1			38078776	XM_355513.1	BC035522		ILMN_2755351	005390075	S	4272	GGCTTGATGATGCCCGTGTAGCATTCTGAAGGCTGATGGACGGCCACCCT										
Mus musculus	RefSeq	ILMN_247360	ILMN_247360	CDAN1	NM_026891.2	NM_026891.2		68968	124430552	NM_026891.2	Cdan1	NP_081167.2	ILMN_2959974	002680450	S	4247	GGTCTTCTATGGACCGTCACCTCTTTGCAGGGAACTAGTCAGACCAAGCC	2	-	120543977-120544026	2qE5	Mus musculus congenital dyserythropoietic anemia, type I (human) (Cdan1), mRNA. XM_925221 XM_985468 XM_985530 XM_985568	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence TAS]		CDA1; MGC144128; AI448026; 1500015A01Rik; CDA-I; AW492297; CDAI	CDA1; MGC144128; AI448026; 1500015A01Rik; CDA-I; AW492297; CDAI
Mus musculus	RefSeq	ILMN_209513	ILMN_247360	CDAN1	NM_026891.2	NM_026891.2		68968	124430552	NM_026891.2	Cdan1	NP_081167.2	ILMN_1222902	004760500	S	5822	CTCTAGGATCAGTGCAGGCCCACAAATATGGAAATGCATGGTGGTCAACC	2	-	120542402-120542451	2qE5	Mus musculus congenital dyserythropoietic anemia, type I (human) (Cdan1), mRNA. XM_925221 XM_985468 XM_985530 XM_985568	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence TAS]		CDA1; MGC144128; AI448026; 1500015A01Rik; CDA-I; AW492297; CDAI	CDA1; MGC144128; AI448026; 1500015A01Rik; CDA-I; AW492297; CDAI
Mus musculus	RefSeq	ILMN_209619	ILMN_209619	NOX1	NM_172203.1	NM_172203.1		237038	26251302	NM_172203.1	Nox1	NP_757340.1	ILMN_1243266	003180053	S	1614	CCTGCGCAAACGCTGTCAGCGATACTCGAGTCTGGATCCTAGGAAGGTTC	X	-	130621713-130621762	XqE3	Mus musculus NADPH oxidase 1 (Nox1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IDA]	MOX1; NOH1; NOX1alpha; NOX1a; NOH-1; GP91-2	MOX1; NOH1; NOX1alpha; NOX1a; NOH-1; GP91-2
Mus musculus	RefSeq	ILMN_209619	ILMN_209619	NOX1	NM_172203.1	NM_172203.1		237038	26251302	NM_172203.1	Nox1	NP_757340.1	ILMN_1246388	002510368	S	1344	CAACTTATTGAATTCCCTGGAACAAGAGATGGAGGAATTAGGCAAAATGG	X	-	130627588-130627637	XqE3	Mus musculus NADPH oxidase 1 (Nox1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IDA]	MOX1; NOH1; NOX1alpha; NOX1a; NOH-1; GP91-2	MOX1; NOH1; NOX1alpha; NOX1a; NOH-1; GP91-2
Mus musculus	RefSeq	ILMN_208811	ILMN_208811	HTR2B	NM_008311.2	NM_008311.2		15559	118130975	NM_008311.2	Htr2b	NP_032337.2	ILMN_2589768	001090056	S	1697	TCATCCTCCTCGATACCCTTCTCACTGAAAACGATGGCGACAAAGCGGAA	1	-	87995937-87995986	1qC5	Mus musculus 5-hydroxytryptamine (serotonin) receptor 2B (Htr2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The series of molecular signals generated as a consequence of a serotonin receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7208] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 51378] [evidence ISO]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence TAS]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISO]	5-HT2B; AJ012488; AV377389	5-HT2B; AJ012488; AV377389
Mus musculus	RefSeq	ILMN_200280	ILMN_200280	LOC386126	XM_359081.1	XM_359081.1			38081208	XM_359081.1	LOC386126		ILMN_1245544	000610438	S	180	GATTTGGCGTATTGACTCCCCAGATGGACACAAGGACCAGACAGAACCTC										
Mus musculus	RefSeq	ILMN_184571	ILMN_257776	ZFP383	XM_001002176.1	XM_001002176.1		73729	94379827	XM_001002176.1	Zfp383	XP_001002176.1	ILMN_1213651	000940608	S	594	GAACTATAGCAACCTGCTCTCAGTGGGTAAGGACACCTGTATCAGCAGCG					PREDICTED: Mus musculus zinc finger protein 383, transcript variant 2 (Zfp383), mRNA.					
Mus musculus	RefSeq	ILMN_218930	ILMN_218930	LYZ1	NM_013590.3	NM_013590.3		17110	142378997	NM_013590.3	Lyz1	NP_038618.1	ILMN_1247933	000840092	S	133	ATGGATGGCTACCGTGGTGTCAAGCTGGCTGACTGGGTGTGTTTAGCTCA	10	-	116728233-116728249:116729759-116729791	10qD2	Mus musculus lysozyme 1 (Lyz1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism [goid 50829] [evidence IDA]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]	Lzp-s	Lzp-s
Mus musculus	RefSeq	ILMN_218930	ILMN_218930	LYZ1	NM_013590.3	NM_013590.3		17110	142378997	NM_013590.3	Lyz1	NP_038618.1	ILMN_2736867	002360719	S	1163	TACTAACTCTGAGACAGAAGAGCTTGTACCAGCCAATAACCACAGGAGCA	10	-	116724903-116724952	10qD2	Mus musculus lysozyme 1 (Lyz1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism [goid 50829] [evidence IDA]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]	Lzp-s	Lzp-s
Mus musculus	RefSeq	ILMN_214628	ILMN_214628	PAPOLG	NM_172555.1	NM_172555.1		216578	27369777	NM_172555.1	Papolg	NP_766143.1	ILMN_2941033	007160292	S	3377	GCTCACCATAACTCCCCACAGTCGCCAACAGTTTCTTCATGGATTAGGCA	11	-	23762966-23763015	11qA3.2	Mus musculus poly(A) polymerase gamma (Papolg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The enzymatic addition of a sequence of adenylyl residues at the 3' end of an RNA molecule [goid 43631] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group [goid 4652] [evidence IEA]	9630006B20Rik; RP23-42P24.1	9630006B20Rik; RP23-42P24.1
Mus musculus	RefSeq	ILMN_215472	ILMN_215472	FOXJ2	NM_021899.2	NM_021899.2		60611	40254530	NM_021899.2	Foxj2	NP_068699.1	ILMN_1252110	005130097	S	4497	CTTTATACCACCCATAATGCTTTGCATTGGTGCAGGCTGGGAAGGGGGTG	6	+	122795238-122795287	6qF2	Mus musculus forkhead box J2 (Foxj2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Fhx	Fhx
Mus musculus	Riken	ILMN_203424	ILMN_203424	MTAP4	ri|B830016E23|PX00073A24|AK046825|3447					AK046825	Mtap4		ILMN_2557201	002060603	S	3235	ACACTTCCATTATCCAGATCTGAGCCGTGCAAAGCTCAATTGACTCTTGG						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]			
Mus musculus	RefSeq	ILMN_214591	ILMN_214591	KLHDC1	NM_178253.4	NM_178253.4		271005	146198748	NM_178253.4	Klhdc1	NP_839984.1	ILMN_2649636	006200537	S	1736	AGGGAAGCGTGTTTAGTGGTTCTGGCTCCGTCCCGCTATGACTGGGTGGA				12qC2	Mus musculus kelch domain containing 1 (Klhdc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC141301; MGC141300	MGC141301; MGC141300
Mus musculus	Riken	ILMN_203081	ILMN_203081	A430056C07RIK	ri|A430056C07|PX00136L18|AK040071|1049					AK040071	A430056C07Rik		ILMN_1254699	006350093	S	552	CTGCCTGGGTGTGCTTACTTATCTATGACCATTGCCCTCGCTGCATGTAC										
Mus musculus	MEEBO	ILMN_224033	ILMN_224033	ADRBK1	scl53453.19_390				33859768	NM_130863	Adrbk1		ILMN_2773496	000780398	S	3095	CTCCTAGGGCGTTTCTTTGCCGATTTTTGAGTGTGATTTTAAAGAGTGGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IGI]; The process that stops, prevents or reduces the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity after prolonged stimulation with an agonist of the pathway [goid 2029] [evidence IMP]; The process that stops, prevents or reduces the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity after prolonged stimulation with an agonist of the pathway [goid 2029] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor [goid 47696] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IDA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IMP]		
Mus musculus	Riken	ILMN_204789	ILMN_204789	D230044L08RIK	ri|D230044L08|PX00189J24|AK052085|1116					AK052085	D230044L08Rik		ILMN_1257426	004810647	S	1040	TTGACCACCTGAAGTTGTGCTCTGACCCACACAAGCACACCACCAAATGC										
Mus musculus	RefSeq	ILMN_216673	ILMN_216673	CDV3	NM_175833.1	NM_175833.1		321022	28461293	NM_175833.1	Cdv3	NP_787027.1	ILMN_3150963	002260639	A	2732	GACTTCATTTGGGCACCAGAAACGTTAACACCTTGAGCCACAAACTTCCC	9	-	103255727-103255776	9qF1	Mus musculus carnitine deficiency-associated gene expressed in ventricle 3 (Cdv3), transcript variant CDV3B, mRNA. XM_975047	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			2510010F10Rik; TPP36; C230084J24Rik; C79446	2510010F10Rik; TPP36; C230084J24Rik; C79446
Mus musculus	MEEBO	ILMN_217169	ILMN_217169	HTR6	scl23623.3.1_275	NM_021358.1			10946683	NM_021358.1	Htr6		ILMN_2679840	006420079	S	1254	GCCACCCACCAGGGCCCCTACTGTGGTCAACTTCTTCGTCACAGACTCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215943	ILMN_215943	ANKRD9	scl42041.4_62	NM_175207.2			31340800	NM_175207.2	Ankrd9		ILMN_2665496	002350093	S	2278	GGGATTTTGCTGGGCTGTGAAATTCAACCTTTGTGGCATAGGCTTGCAGG								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199548	ILMN_235623	AIM2	NM_001013779.1	NM_001013779.1		383619	62000647	NM_001013779.1	Aim2	NP_001013801.1	ILMN_1223868	001260739	S	231	GGAGGTGTTGGTGCTGGGAAACCCAAGCAAAACAAAGTGCGAGGAAGGAG	1	+	175394046-175394095	1qH3	Mus musculus absent in melanoma 2 (Aim2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm1313	Gm1313
Mus musculus	RefSeq	ILMN_235623	ILMN_235623	AIM2	NM_001013779.1	NM_001013779.1		383619	62000647	NM_001013779.1	Aim2	NP_001013801.1	ILMN_3009792	000150095	S	1140	AGTATGGCAGGATTGCAGATGTGACAGCAGGGCCTTGTCGGAGAGACGCC	1	+	175395878-175395927	1qH3	Mus musculus absent in melanoma 2 (Aim2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm1313	Gm1313
Mus musculus	RefSeq	ILMN_198457	ILMN_247810	EG627624	XM_894499.3	XM_894499.3		627624	149270554	XM_894499.3	EG627624	XP_899592.1	ILMN_1242630	003400400	S	737	GGAGAACCTAGCAGCAGCCAAACATGACCTCCTCAGAGTACAGGAGCAGC	19	+	43355998-43356047	19qC3	PREDICTED: Mus musculus predicted gene, EG627624 (EG627624), mRNA.					
Mus musculus	RefSeq	ILMN_216280	ILMN_216280	DAPK2	NM_010019.2	NM_010019.2		13143	34328166	NM_010019.2	Dapk2	NP_034149.2	ILMN_2669333	003390594	S	1129	TGCGAGAGTGACACAGAGGAGAACATCGCCAGGAGGAAAGCCCTTCACCC	9	+	66119448-66119497	9qC	Mus musculus death-associated kinase 2 (Dapk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence ISS]		
Mus musculus	RefSeq	ILMN_216280	ILMN_216280	DAPK2	NM_010019.2	NM_010019.2		13143	34328166	NM_010019.2	Dapk2	NP_034149.2	ILMN_2977558	006180427	S	1662	CTGTGTCTGCCAGCCTCTTGCCAGCCCACTGTGTTGTAGGTTTTTTCTCG	9	+	66119981-66120030	9qC	Mus musculus death-associated kinase 2 (Dapk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence ISS]		
Mus musculus	RefSeq	ILMN_218234	ILMN_237477	MAN1B1	NM_001029983.1	NM_001029983.1		227619	71534294	NM_001029983.1	Man1b1	NP_001025154.1	ILMN_1239921	006100110	S	3466	GTGTATTCTCCATCTCCTGCCAAACTATGGCTGGTGTCAAGGGATGACAG	2	+	25207470-25207519	2qA3	Mus musculus mannosidase, alpha, class 1B, member 1 (Man1b1), mRNA.		The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IMP]	Gm108; MANA-ER; E430019H13Rik	Gm108; MANA-ER; E430019H13Rik
Mus musculus	RefSeq	ILMN_252975	ILMN_252975	BLVRB	NM_144923.2	NM_144923.2		233016	31981739	NM_144923.2	Blvrb	NP_659172.1	ILMN_2792868	004010446	S	678	GACCTGGGCCACTTCATGCTACGGTGCCTCACCACCAATGAGTATGACGG	7	+	27174554-27174603	7qA3	Mus musculus biliverdin reductase B (flavin reductase (NADPH)) (Blvrb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: bilirubin + NAD(P)+ = biliverdin + NAD(P)H + H+ [goid 4074] [evidence IEA]; Catalysis of the reaction: reduced riboflavin + NADP+ = riboflavin + NADPH + H+ [goid 42602] [evidence IEA]	MGC27866; MGC11726	MGC27866; MGC11726
Mus musculus	RefSeq	ILMN_221824	ILMN_221824	DEPDC1A	NM_029523.2	NM_029523.2		76131	31542024	NM_029523.2	Depdc1a	NP_083799.2	ILMN_2997878	004480520	S	2733	CCATCCAGATAAAATTGTGGTGCTTTTAAAGAAGAAAACACGTCTGTGTC	3	+	159192353-159192402	3qH4	Mus musculus DEP domain containing 1a (Depdc1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	Depdc1; 5830484J08Rik	Depdc1; 5830484J08Rik
Mus musculus	RefSeq	ILMN_204161	ILMN_221824	DEPDC1A	NM_029523.2	NM_029523.2		76131	31542024	NM_029523.2	Depdc1a	NP_083799.2	ILMN_2562853	005910025	S	477	ACAAAGATGGTATTTTTAAATTACGAAACTTATCTCAAAAAACTTCTAAG	3	+	159177233-159177282	3qH4	Mus musculus DEP domain containing 1a (Depdc1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	Depdc1; 5830484J08Rik	Depdc1; 5830484J08Rik
Mus musculus	RefSeq	ILMN_221824	ILMN_221824	DEPDC1A	NM_029523.2	NM_029523.2		76131	31542024	NM_029523.2	Depdc1a	NP_083799.2	ILMN_2746915	001400497	S	1178	CAAAGAAATGATCAAGGATTTCAAGAAAGATGTGCCAAGAAAATGCAGCT	3	+	159185686-159185735	3qH4	Mus musculus DEP domain containing 1a (Depdc1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	Depdc1; 5830484J08Rik	Depdc1; 5830484J08Rik
Mus musculus	RefSeq	ILMN_221824	ILMN_221824	DEPDC1A	NM_029523.2	NM_029523.2		76131	31542024	NM_029523.2	Depdc1a	NP_083799.2	ILMN_2740917	006450113	S	2859	GTACACTTTTATATAATCTTTTTACACTTATGGTCTATTTAACTTTATAT	3	+	159192479-159192528	3qH4	Mus musculus DEP domain containing 1a (Depdc1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	Depdc1; 5830484J08Rik	Depdc1; 5830484J08Rik
Mus musculus	RefSeq	ILMN_192975	ILMN_253752	ZRANB3	NM_027678.2	NM_027678.2		226409	141801832	NM_027678.2	Zranb3	NP_081954.1	ILMN_2493067	003140731	S	4043	GGCTAATTGTCAAAACAGATTTTGTCTCCTGGTCCTCGTTTCCTGGTTTT	1	-	129850824-129850873	1qE4	Mus musculus zinc finger, RAN-binding domain containing 3 (Zranb3), mRNA. XM_896419 XM_896436 XM_912948 XM_922552 XM_922558 XM_922565 XM_922581 XM_922587 XM_922596 XM_974893 XM_974926 XM_974968 XM_975006 XM_975040 XM_975084	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI316834; C730006D09; 4933425L19Rik	AI316834; C730006D09; 4933425L19Rik
Mus musculus	RefSeq	ILMN_191578	ILMN_251932	SSH2	NM_177710.3	NM_177710.3		237860	37674237	NM_177710.3	Ssh2	NP_808378.2	ILMN_2713231	005900367	S	4205	CCCCGTCAGCAACATGGCAGAACTCACCCCCTTAGAAGACTGAAAAGAGC	11	+	77268887-77268936	11qB5	Mus musculus slingshot homolog 2 (Drosophila) (Ssh2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	BC030940; BB104748; SSH-2; mSSH-2L	BC030940; BB104748; SSH-2; mSSH-2L
Mus musculus	Riken	ILMN_204878	ILMN_204878	SF3B1	ri|A430070C20|PX00138K07|AK040149|3590					AK040149	Sf3b1		ILMN_2568308	001110437	S	3310	GTGCAGATGTAAGTTATGGAGTCAGTCTGAAAAGGCTACCTTTCTGGGAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence ISO]	The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [evidence ISO]		
Mus musculus	RefSeq	ILMN_216214	ILMN_216214	ITGAE	NM_008399.1	NM_008399.1		16407	6680481	NM_008399.1	Itgae	NP_032425.1	ILMN_2699898	007100687	S	3775	AGCACGGTTCCCAGTTTGCCATGCGTTTTGATGACTGATAGACCAAAGTC	11	+	72960878-72960927	11qB4	Mus musculus integrin alpha E, epithelial-associated (Itgae), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	A530055J10; CD103; alpha-E1	A530055J10; CD103; alpha-E1
Mus musculus	RefSeq	ILMN_216214	ILMN_216214	ITGAE	NM_008399.1	NM_008399.1		16407	6680481	NM_008399.1	Itgae	NP_032425.1	ILMN_1249573	001300059	S	3275	ACTGCCGATCCTTGGTGAAATATCTTTCAACAAATCTCTCTATGAGGGGC	11	+	72954201-72954250	11qB4	Mus musculus integrin alpha E, epithelial-associated (Itgae), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	A530055J10; CD103; alpha-E1	A530055J10; CD103; alpha-E1
Mus musculus	RefSeq	ILMN_216214	ILMN_216214	ITGAE	NM_008399.1	NM_008399.1		16407	6680481	NM_008399.1	Itgae	NP_032425.1	ILMN_1217629	000520196	S	3777	GCACGGTTCCCAGTTTGCCATGCGTTTTGATGACTGATAGACCAAAGTCT	11	+	72960880-72960929	11qB4	Mus musculus integrin alpha E, epithelial-associated (Itgae), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	A530055J10; CD103; alpha-E1	A530055J10; CD103; alpha-E1
Mus musculus	RefSeq	ILMN_200194	ILMN_200194	LOC385909	XM_358995.1	XM_358995.1			38080870	XM_358995.1	LOC385909		ILMN_1225130	004890373	S	64	AAGGCCATACCGTTCGAGCTAAGCCATCATGAAGATCAGCCACATACTGC										
Mus musculus	RefSeq	ILMN_214062	ILMN_214062	LAPTM4B	NM_033521.3	NM_033521.3		114128	118130826	NM_033521.3	Laptm4b	NP_277056.1	ILMN_2754074	006330608	S	1726	TCAAGCAGTCTTCAGAAAGATAAGGAGGTTTGTTCCCATGTAGAATACTC	15	+	34213879-34213928	15qB3.1	Mus musculus lysosomal-associated protein transmembrane 4B (Laptm4b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		C330023P13Rik; LAPTM4beta	C330023P13Rik; LAPTM4beta
Mus musculus	RefSeq	ILMN_214062	ILMN_214062	LAPTM4B	NM_033521.3	NM_033521.3		114128	118130826	NM_033521.3	Laptm4b	NP_277056.1	ILMN_1214719	005700181	S	63	ACGAGCCCGGGCAGGCCACGTGACCCACGGCTTCTCCTCCCCCCTGCCTC	15	+	34167843-34167892	15qB3.1	Mus musculus lysosomal-associated protein transmembrane 4B (Laptm4b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		C330023P13Rik; LAPTM4beta	C330023P13Rik; LAPTM4beta
Mus musculus	MEEBO	ILMN_194029	ILMN_194029	TYKI	scl43337.5_334	NM_020557.3			31340573	NM_020557.3	Tyki		ILMN_1240864	001410554	S	1	CCTCTCTGAGATGATTGCACCAGAGGCTGAATAGGAAGTCGTAGTGCTTT										
Mus musculus	RefSeq	ILMN_220388	ILMN_220388	CTSW	NM_009985.3	NM_009985.3		13041	142367215	NM_009985.3	Ctsw	NP_034115.2	ILMN_2721399	001570133	S	1070	ATCCCTTCACAGCTCAAGTGGACTCACCAGTAAAGAAGGCACGGACCTCT	19	-	5465352-5465401	19qA	Mus musculus cathepsin W (Ctsw), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	lymphopain	lymphopain
Mus musculus	MEEBO	ILMN_192792	ILMN_192792	4921528G01RIK	scl16092.23_302				31560035	NM_023884	4921528G01Rik		ILMN_1232452	004150470	S	1	CCACAGACAGTAAAGCTCATTTGTTTCTCTCATAGCCAAGGAGAACTCTT										
Mus musculus	MEEBO	ILMN_192792	ILMN_192792	4921528G01RIK	scl16092.23_302				31560035	NM_023884	4921528G01Rik		ILMN_1247585	007050390	S	1886	GTAAACGCCTGAGACAGAAGAGGAGTGCTATTGTTCCCGTGTGGAACCGG										
Mus musculus	RefSeq	ILMN_228501	ILMN_228501	LOC574405	NM_001025384.1	NM_001025384.1		574405	85701579	NM_001025384.1	LOC574405	NP_001020555.1	ILMN_3063284	002030347	I	2	AAGGCGGTCTGTGTCAACCTTGATACCAGCCAGGGCAAAGTCACTTGCAG	X	-	69402119-69402168	XqA7.3	Mus musculus hypothetical protein LOC574405 (LOC574405), mRNA.					
Mus musculus	RefSeq	ILMN_228501	ILMN_228501	LOC574405	NM_001025384.1	NM_001025384.1		574405	85701579	NM_001025384.1	LOC574405	NP_001020555.1	ILMN_3141058	003420129	A	570	CCTGTCCTGATCAGCACAGCCCCAGAGTCCAGTCGCCATGGACTCTGCAG	X	-	69392194-69392243	XqA7.3	Mus musculus hypothetical protein LOC574405 (LOC574405), mRNA.					
Mus musculus	RefSeq	ILMN_222723	ILMN_228244	IGHG	XM_001001076.2	XM_001001076.2		380794	149263749	XM_001001076.2	Ighg	XP_001001076.2	ILMN_1249975	001110253	S	824	GGAAAGATGTCAGTCTCACTTGCCTGGTCGTGGGCTTCAACCCTGGAGAC	12	-	114537001-114537050		PREDICTED: Mus musculus Immunoglobulin heavy chain (gamma polypeptide), transcript variant 1 (Ighg), mRNA.			Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209528	ILMN_212779	MAP4K5	NM_024275.2	NM_024275.2		399510	77736532	NM_024275.2	Map4k5	NP_077237.2	ILMN_1258888	004610349	S	1270	GCTGTTGGACAAGGTGAGCAATCCGGACAACCATGCTCCCTACAGTGAGG	12	-	70942926-70942975	12qC2	Mus musculus mitogen-activated protein kinase kinase kinase kinase 5 (Map4k5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	KHS; MAPKKKK5; GCKR; 4432415E19Rik	KHS; MAPKKKK5; GCKR; 4432415E19Rik
Mus musculus	RefSeq	ILMN_212779	ILMN_212779	MAP4K5	NM_024275.2	NM_024275.2		399510	77736532	NM_024275.2	Map4k5	NP_077237.2	ILMN_1233887	006400639	S	4157	CTTAATGCATTTATTAAGAACAGTTAGCATTGAGGTAATGAACACAGGGG	12	-	70904991-70905040	12qC2	Mus musculus mitogen-activated protein kinase kinase kinase kinase 5 (Map4k5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	KHS; MAPKKKK5; GCKR; 4432415E19Rik	KHS; MAPKKKK5; GCKR; 4432415E19Rik
Mus musculus	RefSeq	ILMN_209528	ILMN_212779	MAP4K5	NM_024275.2	NM_024275.2		399510	77736532	NM_024275.2	Map4k5	NP_077237.2	ILMN_1239275	002230309	S	40	TGCGTTCTCGGGCGGGCCAGGCTCGATCCGCGCCGGCCGCGAACGTGTCT	12	-	70994061-70994110	12qC2	Mus musculus mitogen-activated protein kinase kinase kinase kinase 5 (Map4k5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	KHS; MAPKKKK5; GCKR; 4432415E19Rik	KHS; MAPKKKK5; GCKR; 4432415E19Rik
Mus musculus	RefSeq	ILMN_209528	ILMN_212779	MAP4K5	NM_024275.2	NM_024275.2		399510	77736532	NM_024275.2	Map4k5	NP_077237.2	ILMN_1216281	000060338	S	3898	GCCAAGGGAGAAAGTAATTACACGTGTAATCTTGGGGTTTTCACATACAT	12	-	70905250-70905299	12qC2	Mus musculus mitogen-activated protein kinase kinase kinase kinase 5 (Map4k5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	KHS; MAPKKKK5; GCKR; 4432415E19Rik	KHS; MAPKKKK5; GCKR; 4432415E19Rik
Mus musculus	MEEBO	ILMN_220132	ILMN_220132	9630011N22RIK	scl00320753.1_33	NM_177252.2			31343174	NM_177252.2	9630011N22Rik		ILMN_2717984	006860379	S	2032	GGCTCAGGCATAAGAGTTGGGTAGACTGTGGAGGTTTAGTCTAGGTTGAA										
Mus musculus	RefSeq	ILMN_213786	ILMN_247034	1700020A23RIK	XM_918226.2	XM_918226.2		75656	94366814	XM_918226.2	1700020A23Rik	XP_923319.1	ILMN_1258084	006960327	S	319	TCCCCTCTCTCCAACAAAGATGGCCTCGGGACTGCTCAGCCTGCAGGATG				2qF1	PREDICTED: Mus musculus RIKEN cDNA 1700020A23 gene, transcript variant 3 (1700020A23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216721	ILMN_216721	KIF9	NM_010628.2	NM_010628.2		16578	142374447	NM_010628.2	Kif9	NP_034758.1	ILMN_1238715	005690653	S	2407	GGTGGGCCTCCAACAGTCACACAGAAAATAGTCTCATCAATAGCTTGAAG	9	+	110427408-110427438:110427439-110427457	9qF2	Mus musculus kinesin family member 9 (Kif9), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	MGC141389	MGC141389
Mus musculus	RefSeq	ILMN_196978	ILMN_196978	LOC328091	XM_284969.2	XM_284969.2			38050518	XM_284969.2	LOC328091		ILMN_2526467	004590678	S	264	TGAGGAGGCCAAGGACCACTGCATCCTGGTAGAATAACTCGCTGGCAGCT										
Mus musculus	RefSeq	ILMN_217978	ILMN_217978	AMBN	NM_009664.1	NM_009664.1		11698	6753043	NM_009664.1	Ambn	NP_033794.1	ILMN_1240933	002690333	S	1552	GTGTCAGCACTTGGTGGTATAGCATGTAGCTGTCTTAGGCATTATAAAAT	5	+	88897254-88897303	5qE1	Mus musculus ameloblastin (Ambn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence TAS]	The action of a molecule that contributes to the structural integrity of tooth enamel [goid 30345] [evidence IEA]; A constituent of the extracellular matrix that enables the matrix to resist compressive forces; often a proteoglycan [goid 30021] [evidence TAS]	MGC107285	MGC107285
Mus musculus	MEEBO	ILMN_186983	ILMN_186983	TRPM1	scl017364.14_266	XM_358370.1			38086814	XM_358370.1	Trpm1		ILMN_2440151	006100692	S	10	GCAGCCGAAAGCACTTAAGCTTCTGGGAATGGAAGTAAGTAGGACATGTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_213120	ILMN_213120	CDK10	NM_194444.1	NM_194444.1		234854	37595739	NM_194444.1	Cdk10	NP_919426.1	ILMN_2633872	001450431	S	112	AGGAGTTTGAGAAGCTGAACCGGATTGGCGAGGGCACCTATGGCATCGTG	8	+	125750268-125750317	8qE1	Mus musculus cyclin-dependent kinase (CDC2-like) 10 (Cdk10), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	BC017131	BC017131
Mus musculus	RefSeq	ILMN_213120	ILMN_213120	CDK10	NM_194444.1	NM_194444.1		234854	37595739	NM_194444.1	Cdk10	NP_919426.1	ILMN_2646209	005090095	S	1465	GACCCCGGGCAGGAGGGAGCAAGGGTTGGTTAACTGGAGTAGGATACTTG	8	+	125756010-125756059	8qE1	Mus musculus cyclin-dependent kinase (CDC2-like) 10 (Cdk10), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	BC017131	BC017131
Mus musculus	RefSeq	ILMN_213120	ILMN_213120	CDK10	NM_194444.1	NM_194444.1		234854	37595739	NM_194444.1	Cdk10	NP_919426.1	ILMN_1255741	002940543	S	101	GCCGAAGCGTTAAGGAGTTTGAGAAGCTGAACCGGATTGGCGAGGGCACC	8	+	125750257-125750306	8qE1	Mus musculus cyclin-dependent kinase (CDC2-like) 10 (Cdk10), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	BC017131	BC017131
Mus musculus	Riken	ILMN_204702	ILMN_204702	ECT2	ri|A430072N08|PX00137L20|AK040174|2229					AK040174	Ect2		ILMN_1239773	002750767	S	2111	CAAGTCACTCTCTTCCTCTTCAATGACTGCCTCGAGGTAAATTTGTACTC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_219346	ILMN_236263	LOC436539	XM_988327.1	XM_988327.1		436539	94398056	XM_988327.1	LOC436539	XP_993421.1	ILMN_1215217	004730767	S	33	GCTGCTGTTCATGCTTGAGAGGACACATGGAAATTCAGTGACCCAGATGC				14qC2	PREDICTED: Mus musculus similar to TRAV6-2 (LOC436539), mRNA.					
Mus musculus	Riken	ILMN_205242	ILMN_205242	E230013J01RIK	ri|E230013J01|PX00210C06|AK054033|1946					AK054033	E230013J01Rik		ILMN_1247726	004830164	S	1418	CAGAGTGAACAAGGAAGAGGTCTACAAATACAGAAGAACCCTGAGATGTG										
Mus musculus	MEEBO	ILMN_220317	ILMN_220317	5530401A10RIK	scl071431.1_330	XM_355123.1			38084785	XM_355123.1	5530401A10Rik		ILMN_2720506	005690615	S	338	GGAAGGCATCCCTGGAGTGGTTTCTTTACTGTACTTCCATCAGAAGAGTG										
Mus musculus	MEEBO	ILMN_187280	ILMN_187280	DGKB	scl43262.30_332				31341054	NM_178681	Dgkb		ILMN_2442740	002850554	S	4	ACTGTCGATGCTACTCACACTAGCTAGGGCTCTTGGGTGGTTCTTTTCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IDA]		
Mus musculus	MEEBO	ILMN_187280	ILMN_187280	DGKB	scl43262.30_332				31341054	NM_178681	Dgkb		ILMN_2610295	003840152	S	2669	TGTATCACATGCTTCATATACAATAATCAGTAGCATAGGCTGAGTAAACA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IDA]		
Mus musculus	Riken	ILMN_203962	ILMN_203962	A430099B18RIK	ri|A430099B18|PX00140C09|AK040456|1826					AK040456	A430099B18Rik		ILMN_1246935	004560100	S	1231	GCGAGGGCTTGAGACCAGATGTTTCACTGGTGGATCAAGAAAAAAGAAAC										
Mus musculus	RefSeq	ILMN_193264	ILMN_193264	UBQLN1	NM_026842.3	NM_026842.3		56085	22726198	NM_026842.3	Ubqln1	NP_081118.3	ILMN_2508410	006980019	S	2282	GTTGGAAGACTTTGTACTGGTGAATGGCAATATGCAGGTGGGGCAGTGTC	13	-	58277574-58277623	13qB1	Mus musculus ubiquilin 1 (Ubqln1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space [goid 19215] [evidence NAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence NAS]	1110046H03Rik; D13Ertd372e; C77538; DA41; XDRP1; Plic-1; Dsk2; AU019746; 1810030E05Rik	1110046H03Rik; D13Ertd372e; C77538; DA41; XDRP1; Plic-1; Dsk2; AU019746; 1810030E05Rik
Mus musculus	RefSeq	ILMN_193264	ILMN_193264	UBQLN1	NM_026842.3	NM_026842.3		56085	22726198	NM_026842.3	Ubqln1	NP_081118.3	ILMN_2495573	007320592	S	176	CTGGAAATCCTCAGCTTCAAGAACAAATGAGACAACAGCTCCCAACTTTC	13	-	58282191-58282240	13qB1	Mus musculus ubiquilin 1 (Ubqln1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space [goid 19215] [evidence NAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence NAS]	1110046H03Rik; D13Ertd372e; C77538; DA41; XDRP1; Plic-1; Dsk2; AU019746; 1810030E05Rik	1110046H03Rik; D13Ertd372e; C77538; DA41; XDRP1; Plic-1; Dsk2; AU019746; 1810030E05Rik
Mus musculus	RefSeq	ILMN_222103	ILMN_222103	HIST1H2BN	NM_178201.1	NM_178201.1		319187	30061394	NM_178201.1	Hist1h2bn	NP_835508.1	ILMN_1257520	001260605	S	1	ATGCCTGAACCCGCTAAGTCCGCTCCCGCCCCGAAGAAGGGGTCCAAGAA	13	+	21845992-21846041	13qA3.1	Mus musculus histone cluster 1, H2bn (Hist1h2bn), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188638	ILMN_257421	FBXO11	NM_001081034.1	NM_001081034.1		225055	124486643	NM_001081034.1	Fbxo11	NP_001074503.1	ILMN_1260058	005270019	S	3403	CTCATGTCCCAGTATGTACCTTCTTTCTATGAAAGAGAAAAACACTAACC	17	-	88390759-88390808	17qE4	Mus musculus F-box protein 11 (Fbxo11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	C80048; Jf; MGC156416	C80048; Jf; MGC156416
Mus musculus	RefSeq	ILMN_222907	ILMN_222907	AGTR1A	NM_177322.2	NM_177322.2		11607	31341112	NM_177322.2	Agtr1a	NP_796296.1	ILMN_2972521	003190553	S	1745	GGAACCTTGTTTGTCCCTTTAGTCATTAGCAATGGAGACCCACGTGTCCC	13	+	30474298-30474347	13qA3.2	Mus musculus angiotensin II receptor, type 1a (Agtr1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IC ]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The specific actions or reactions of an organism relating to the intake of liquids, especially water [goid 42756] [evidence IGI]; The specific actions or reactions of an organism relating to the intake of liquids, especially water [goid 42756] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is increased [goid 45777] [evidence IDA]; The process by which the force of blood traveling through the circulatory system is increased [goid 45777] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is increased [goid 45777] [evidence IGI]; The process by which an increase in active angiotensin stimulates the adrenal cortices to secrete aldosterone [goid 2018] [evidence IMP]; The process by which angiotensin directly modulates the rate of urine output by the kidney [goid 2019] [evidence IMP]; The regulated release of renin into the blood stream by juxtoglomerular cells [goid 2001] [evidence IMP]; The process by which angiotensinogen metabolites in the bloodstream modulate the force with which blood passes through the circulatory system. The process begins when renin is released and cleaves angiotensinogen [goid 1991] [evidence IGI]; The process by which an angiotensin-mediated signaling system present in the brain regulates the force with which blood passes through the circulatory system [goid 2035] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with bradykinin to initiate a change in cell activity [goid 4947] [evidence IEA];  [goid 4945] [evidence IEA];  [goid 1596] [evidence IDA]	AT2R1A; Agtr-1a; AT2R1; Agtr1; AT1; AI551199; AT1a; MGC37610; Angtr-1a; AG2S; 1810074K20Rik	AT2R1A; Agtr-1a; AT2R1; Agtr1; AT1; AI551199; AT1a; MGC37610; Angtr-1a; AG2S; 1810074K20Rik
Mus musculus	RefSeq	ILMN_211279	ILMN_211279	PLXNB1	NM_172775.1	NM_172775.1		235611	27370139	NM_172775.1	Plxnb1	NP_766363.1	ILMN_1246710	003850494	S	8171	CTTCAGACAGATACAGGAAGGGAGGCACCTTTTAAGTCAACATGGCAGGG	9	+	109022156-109022205	9qF2	Mus musculus plexin B1 (Plxnb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU042020; 2900002G15Rik; mKIAA0407	AU042020; 2900002G15Rik; mKIAA0407
Mus musculus	Riken	ILMN_203335	ILMN_203335	4932416C15RIK	ri|4932416C15|PX00017M07|AK030022|4214					AK030022	4932416C15Rik		ILMN_1227789	006420753	S	4040	GCCACCATCAGCTGGCTTCCTATGGCTTGCTATGGACTGGAGGAGGAGTG										
Mus musculus	MEEBO	ILMN_184440	ILMN_184440	NEDL2	scl16763.1.9_28				49457860	NM_001001883	Nedl2		ILMN_2418645	000270609	S	18	CAGAGCATTCCCTAAGAGTTGTCACAGGGGCCTGTTAAGAGAGAGCTGCC										
Mus musculus	Riken	ILMN_201698	ILMN_201698	1700009P10RIK	ri|1700009P10|ZX00036H01|AK005803|1035					AK005803	1700009P10Rik		ILMN_1238024	001990600	S	747	GAACGTTTCCGGCTGCGTTGCTGGTGGCTCTTGAGGACGTAGCTCAGTCT										
Mus musculus	Riken	ILMN_202601	ILMN_202601	5830476G13RIK	ri|5830476G13|PX00103A03|AK020024|821					AK020024	5830476G13Rik		ILMN_1229580	004060671	S	567	CGAGAAAAGGGACCGAGCTGGAGGACAGGGAAAAGTGGCAGAAGAGTCGG										
Mus musculus	Riken	ILMN_201675	ILMN_201675	0610007N19RIK	ri|1810037G11|R000023J21|AK007719|212					AK007719	0610007N19Rik		ILMN_2543688	006180301	S	73	GAATGGAGCAGGGAGGAGCTGAAGAGAGCGTGGCTGGGAGACATGAAGAC										
Mus musculus	RefSeq	ILMN_185168	ILMN_233202	MORC3	NM_001045529.2	NM_001045529.2		338467	141803512	NM_001045529.2	Morc3	NP_001038994.1	ILMN_2424756	001240672	S	3646	CTTTTACTGTATTATGAATGTAAGTGTTTTTTAGCCTGGAGTTAATCATA	16	+	93875948-93875997	16qC4	Mus musculus microrchidia 3 (Morc3), mRNA. XM_978468 XM_978538 XM_978584 XM_978615	A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence ISO]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence ISO]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [evidence ISO]		D16Jhu32e; Zcwcc3; NXP2; AI452146; 1110051N18Rik; BF318192	D16Jhu32e; Zcwcc3; NXP2; AI452146; 1110051N18Rik; BF318192
Mus musculus	RefSeq	ILMN_198103	ILMN_198103	LOC224597	XM_123014.2	XM_123014.2			38081845	XM_123014.2	LOC224597		ILMN_1231389	002650341	S	290	GTGTTCACAGACTCACTGTGGAGGCGAAAAGTGGGCAGAGTTCGTGTGGC										
Mus musculus	Riken	ILMN_201714	ILMN_201714	CAR14	ri|2310044L14|ZX00040K05|AK009805|602					AK009805	Car14		ILMN_1220686	002680575	S	397	GAGATTGGAACTGCACATGGATTGGCACTCCTTTCACCCCAGGACCTCCG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211319	ILMN_211319	A330041J22RIK	scl36645.3_158	NM_176941.2			31342432	NM_176941.2	A330041J22Rik		ILMN_1251121	000020711	S	1193	GGCTGCAGGCAGTAAACCCAGGCACATAAAGTTAGCCTAAGATGGACTGG										
Mus musculus	MEEBO	ILMN_216042	ILMN_216042	4933427E13RIK	scl41762.9.1_46				51766320	XM_483997	4933427E13Rik		ILMN_2666652	006760577	S	1368	CGGAGGAAACTCTAATTTGTAAATTGGTAGAAATGCCAGTAATTTGTTGG										
Mus musculus	RefSeq	ILMN_207320	ILMN_311328	ENSMUSG00000049427	XR_035252.1	XR_035252.1		432561	149261886	XR_035252.1	ENSMUSG00000049427		ILMN_2586720	007150577	S	382	TCTGCTGGCGGTGTATCGCAGGGCCAACGAACGCATCAGGTTCCAAGTAC	11	-	53283544-53283593	11qB1.3	PREDICTED: Mus musculus predicted gene, ENSMUSG00000049427 (ENSMUSG00000049427), misc RNA.					
Mus musculus	RefSeq	ILMN_222832	ILMN_222832	GPR125	XM_132089.7	XM_132089.7		70693	149253878	XM_132089.7	Gpr125	XP_132089.6	ILMN_1251856	002680243	S	4433	CAGCCACCTTGGGGATACAAAGCCGTTCTGAGTATTCTTGTGAGCTTTGG	5	-	50351378-50351427	5qB3	PREDICTED: Mus musculus G protein-coupled receptor 125, transcript variant 1 (Gpr125), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_206758	ILMN_206758	D930009C14RIK	ri|D930009C14|PX00200N19|AK086164|1217					AK086164	D930009C14Rik		ILMN_1254136	000240202	S	871	CAGTCCTGCCTCAGCCCCCTGAATGCATGTTTACAGATGTGCACCAGAGC										
Mus musculus	MEEBO	ILMN_223099	ILMN_223099	FGFBP1	scl014181.8_9	NM_008009.2			24475901	NM_008009.2	Fgfbp1		ILMN_2759371	004250437	S	1809	GAGCTCCATTTGCACATTCTTCCTCAACATGTTACAGGCGACATCATGCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185988	ILMN_185988	B130065L01	scl45673.1.1_202						B130065L01		ILMN_1256319	006860025	S	15	GCCATAGTTGATTATAGACAGTGTAGTCCACTCAGAGTGGTGGAAGGGGG										
Mus musculus	RefSeq	ILMN_219875	ILMN_219875	PIF1	NM_172453.1	NM_172453.1		208084	27369614	NM_172453.1	Pif1	NP_766041.1	ILMN_2714678	006940411	S	3595	GTGCTGGGTTTAGGGGAGAGGCCGTGTTTAGGATACGGAGATGTATGTTC	9	+	65393883-65393932	9qC	Mus musculus PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) (Pif1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	4631410M14; AI449441	4631410M14; AI449441
Mus musculus	RefSeq	ILMN_212167	ILMN_212167	INVS	NM_010569.3	NM_010569.3		16348	111120341	NM_010569.3	Invs	NP_034699.3	ILMN_2664073	004890553	S	2767	GCGTCGAGGTCAGGATGCAAGCAGCTTTATGAGGACATCTGTGCATCTCC	4	+	48434810-48434859	4qB1	Mus musculus inversin (Invs), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	AW455512; inv; MGC141481; AI428552	AW455512; inv; MGC141481; AI428552
Mus musculus	Riken	ILMN_204142	ILMN_204142	B230323K17RIK	ri|B230323K17|PX00159P14|AK045923|1592					AK045923	B230323K17Rik		ILMN_1253648	004640035	S	1232	AGGCTTAAGTGAAGACCTGGTTGGCTTGGTTCTGCCACGACTTCAAAAAG										
Mus musculus	RefSeq	ILMN_223717	ILMN_223717	F630043A04RIK	NM_198605.1	NM_198605.1		219114	38348455	NM_198605.1	F630043A04Rik	NP_941007.1	ILMN_2865912	004830687	S	1898	TGTGTACCACCACCGTCTGGCAGCTTTAGGAAATTTTGTGTGGCATAAAG	14	-	56760983-56761032	14qC3	Mus musculus RIKEN cDNA F630043A04 gene (F630043A04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_225101	ILMN_225101	TMEM160	NM_026938.1	NM_026938.1		69094	58037142	NM_026938.1	Tmem160	NP_081214.1	ILMN_2914295	004780239	S	614	GCTGCCAGTCTGCTCTGGGCTTGTGCAGTAGGTCTCTACATGGGCCAGTT	7	+	17040638-17040687	7qA2	Mus musculus transmembrane protein 160 (Tmem160), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1810008O21Rik	1810008O21Rik
Mus musculus	RefSeq	ILMN_220332	ILMN_225101	TMEM160	NM_026938.1	NM_026938.1		69094	58037142	NM_026938.1	Tmem160	NP_081214.1	ILMN_1219656	004760041	S	659	CAGTTGGAACTGGACGTGGAACTGGTGCCTGAGGATGATGGGGCAGCCAG	7	+	17040683-17040732	7qA2	Mus musculus transmembrane protein 160 (Tmem160), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1810008O21Rik	1810008O21Rik
Mus musculus	RefSeq	ILMN_216123	ILMN_216123	JOSD2	NM_025368.3	NM_025368.3		66124	146135045	NM_025368.3	Josd2	NP_079644.1	ILMN_2667614	001110504	S	706	ACACAAGCTGATCTGCTGCCTGCTCCCACAGTCCTAAGTGTCCAGTGCCT				7qB4	Mus musculus Josephin domain containing 2 (Josd2), mRNA.				1110007C05Rik	1110007C05Rik
Mus musculus	RefSeq	ILMN_215165	ILMN_215165	2400003C14RIK	NM_028018.1	NM_028018.1		71955	21312625	NM_028018.1	2400003C14Rik	NP_082294.1	ILMN_2976120	000050170	S	2194	GCTTACCTGTAGTATTTCTGTACATACCTGTTTCCAGCAACTTCAGTGTC	8	-	112195289-112195338	8qD3	Mus musculus RIKEN cDNA 2400003C14 gene (2400003C14Rik), mRNA.				AW536298; mKIAA0174	AW536298; mKIAA0174
Mus musculus	RefSeq	ILMN_215165	ILMN_215165	2400003C14RIK	NM_028018.1	NM_028018.1		71955	21312625	NM_028018.1	2400003C14Rik	NP_082294.1	ILMN_2749955	003870450	S	880	TACCAGGCCTTTCCTAACATTCACCCACCTCAGATACCAGCAACTCCCCC	8	-	112200670-112200719	8qD3	Mus musculus RIKEN cDNA 2400003C14 gene (2400003C14Rik), mRNA.				AW536298; mKIAA0174	AW536298; mKIAA0174
Mus musculus	RefSeq	ILMN_215165	ILMN_215165	2400003C14RIK	NM_028018.1	NM_028018.1		71955	21312625	NM_028018.1	2400003C14Rik	NP_082294.1	ILMN_1260112	000780600	S	2167	GCTTTGGCATTGGAAGATGAGATTTTTGCTTACCTGTAGTATTTCTGTAC	8	-	112195316-112195365	8qD3	Mus musculus RIKEN cDNA 2400003C14 gene (2400003C14Rik), mRNA.				AW536298; mKIAA0174	AW536298; mKIAA0174
Mus musculus	RefSeq	ILMN_195350	ILMN_243843	TRIM26	NM_001025599.2	NM_001025599.2		22670	128485540	NM_001025599.2	Trim26	NP_001020770.2	ILMN_1240074	006980435	S	3083	CACATGCTGCCTGAGTCACTAGTACCTACACAGTGGCTCCCTCACCACTC	17	+	36994974-36995018:36994345-36994349	17qB1	Mus musculus tripartite motif-containing 26 (Trim26), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Zfp173; Zfp1736; AI462198	Zfp173; Zfp1736; AI462198
Mus musculus	RefSeq	ILMN_219457	ILMN_219457	SUSD2	NM_027890.4	NM_027890.4		71733	141802902	NM_027890.4	Susd2	NP_082166.2	ILMN_2709166	006270037	S	2832	CAAGCCCTGCGTTGGAAGCTCCCATTTCAGTTCCTCACTCCCCAGAGCCT	10	-	75100009-75100057:75100091-75100091	10qC1	Mus musculus sushi domain containing 2 (Susd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1200011D11Rik	1200011D11Rik
Mus musculus	RefSeq	ILMN_256800	ILMN_256800	NRXN2	NM_020253.2	NM_020253.2		18190	62243517	NM_020253.2	Nrxn2	NP_064649.2	ILMN_3015003	001070162	I	5290	AAGGCCTTTTGTGTGTGTCGCTGCTGCCGGGCAACGTGCATTGCTGGGAA	19	+	6509809-6509858	19qA	Mus musculus neurexin II (Nrxn2), mRNA.	A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biosynthesis of a synapse [goid 7416] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA];  [goid 5246] [evidence IGI]	mKIAA0921; 6430591O13Rik	mKIAA0921; 6430591O13Rik
Mus musculus	RefSeq	ILMN_256800	ILMN_256800	NRXN2	NM_020253.2	NM_020253.2		18190	62243517	NM_020253.2	Nrxn2	NP_064649.2	ILMN_3086209	005720543	A	848	GAGGAGGAGCCGGCGATGTGCACCAGCCGACAAAAGGCAAGGAGGAATTT	19	+	6423739-6423788	19qA	Mus musculus neurexin II (Nrxn2), mRNA.	A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biosynthesis of a synapse [goid 7416] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA];  [goid 5246] [evidence IGI]	mKIAA0921; 6430591O13Rik	mKIAA0921; 6430591O13Rik
Mus musculus	RefSeq	ILMN_184407	ILMN_256800	NRXN2	NM_020253.2	NM_020253.2		18190	62243517	NM_020253.2	Nrxn2	NP_064649.2	ILMN_2723541	005560446	S	4450	CGGAATTACATCAGTAACTCGGCCCAGAGCAATGGGGCGGTGGTGAAGGA	19	+	6490774-6490823	19qA	Mus musculus neurexin II (Nrxn2), mRNA.	A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biosynthesis of a synapse [goid 7416] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA];  [goid 5246] [evidence IGI]	mKIAA0921; 6430591O13Rik	mKIAA0921; 6430591O13Rik
Mus musculus	RefSeq	ILMN_210631	ILMN_210631	RNF11	NM_013876.2	NM_013876.2		29864	31982735	NM_013876.2	Rnf11	NP_038904.1	ILMN_2969919	005890202	S	2042	TCCTTATGTTCTCCAGGTGATTCGTTCCTTCCACTCAGTGATATTGTGGT	4	-	108950829-108950878	4qC7	Mus musculus ring finger protein 11 (Rnf11), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IPI]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216249	ILMN_239521	C030046E11RIK	XM_900450.2	XM_900450.2		226089	94405865	XM_900450.2	C030046E11Rik	XP_905543.1	ILMN_1244231	000010504	S	1630	GTCATTCCCTTGTGTAGTCTGTGCTCTTATCCTTTAGTCTCCGAGTGGAG	19	+	29629091-29629140	19qC1	PREDICTED: Mus musculus RIKEN cDNA C030046E11 gene, transcript variant 2 (C030046E11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_198228	ILMN_252671	GM318	XM_622850.3	XM_622850.3		545204	94402762	XM_622850.3	Gm318	XP_622850.1	ILMN_1223971	003520209	S	1400	GGCAACAGCATATTGGAGGATGTGCCTGTGCCACCTGATCAAGAGTGTGA	17	-	36601399-36601448	17qB1	PREDICTED: Mus musculus gene model 318, (NCBI) (Gm318), mRNA.					
Mus musculus	RefSeq	ILMN_212713	ILMN_212713	CD300E	NM_172050.2	NM_172050.2		217306	142377139	NM_172050.2	Cd300e	NP_742047.1	ILMN_1212716	004540435	S	1549	CTCAGCGTTTTTCACACGAATTCATTTACATGTGTGTTTAGCTATGCAGC	11	-	114913581-114913630	11qE2	Mus musculus CD300e antigen (Cd300e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC49720; MGC31495; TREM5; CLM2; BC034097; Cd300le	MGC49720; MGC31495; TREM5; CLM2; BC034097; Cd300le
Mus musculus	RefSeq	ILMN_216937	ILMN_216937	TMEM175	NM_028223.2	NM_028223.2		72392	31982620	NM_028223.2	Tmem175	NP_082499.2	ILMN_2677197	006200437	S	2129	GTTGTTAGACAAAGACAAGAGTCAGCTATGGGACAGCAAAACCCACACTG	5	+	109076037-109076086	5qF	Mus musculus transmembrane protein 175 (Tmem175), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI504381; 3010001K23Rik	AI504381; 3010001K23Rik
Mus musculus	RefSeq	ILMN_209926	ILMN_209926	GKN1	NM_025466.1	NM_025466.1		66283	13384881	NM_025466.1	Gkn1	NP_079742.1	ILMN_2600499	000060541	S	623	GCTCTGACCATCGCAATGCTTGATTATGAGAGTGTTCTCTGGGGGTTGTG	6	-	87296194-87296243	6qD1	Mus musculus gastrokine 1 (Gkn1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]	AMP-18; Fov; 2200002K21Rik; BRICD1	AMP-18; Fov; 2200002K21Rik; BRICD1
Mus musculus	RefSeq	ILMN_240347	ILMN_240347	1700071K01RIK	NM_001033765.1	NM_001033765.1		237880	85702062	NM_001033765.1	1700071K01Rik	NP_001028937.1	ILMN_2890399	004210241	S	602	TTCACAGAGGCGGTGGAAGCCAAACAGGTGGCTCAGCAGGAAGCGGAGAC	11	-	81389083-81389132	11qB5	Mus musculus RIKEN cDNA 1700071K01 gene (1700071K01Rik), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217031	ILMN_217031	MYST1	NM_026370.1	NM_026370.1		67773	21312789	NM_026370.1	Myst1	NP_080646.1	ILMN_2892122	006370674	S	1311	GAAACCACCTATCACAGTGGACTCTGTCTGCCTCAAGTGGGCACCCCCGA	7	+	135068761-135068777:135069101-135069133	7qF3	Mus musculus MYST histone acetyltransferase 1 (Myst1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]	5830450F21Rik; 2010203C02Rik; MOF; D7Ertd629e	5830450F21Rik; 2010203C02Rik; MOF; D7Ertd629e
Mus musculus	MEEBO	ILMN_186511	ILMN_186511	RNF157	scl00217340.1_97				51766540	XM_126776	Rnf157		ILMN_2436139	005820228	S	7	CAGCCCCACTTTATCAATTTGATCCTTATGGAGTAGATTTCAGATGGGAC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201324	ILMN_201324	LOC382447	XM_356509.1	XM_356509.1			38090910	XM_356509.1	LOC382447		ILMN_1231238	001690280	S	519	CTCTGGGAAGAAAAAGGGGTCAAAAGCGGGCCATGACACACTGCTCCACG										
Mus musculus	RefSeq	ILMN_219585	ILMN_219585	KYNU	NM_027552.1	NM_027552.1		70789	27229112	NM_027552.1	Kynu	NP_081828.1	ILMN_1214750	000520138	S	2612	CCAGTCATTGCTTTTTTGATGCCACTACTAGTATGCATTTACTGGCAAAG	2	+	43538114-43538163	2qB	Mus musculus kynureninase (L-kynurenine hydrolase) (Kynu), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid [goid 6569] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: L-kynurenine + H2O = anthranilate + L-alanine [goid 30429] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	4432411A05Rik	4432411A05Rik
Mus musculus	RefSeq	ILMN_211020	ILMN_211020	KRT34	NM_027563.3	NM_027563.3		16672	146141164	NM_027563.3	Krt34	NP_081839.1	ILMN_2611658	000730255	S	1452	TCACATGTCTGCCAACGGAACTCCGTGAGATTGGCATAGAGGGCGGTTCC				11qD	Mus musculus keratin 34 (Krt34), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			4733401E01Rik; Krt1-4; Ha2	4733401E01Rik; Krt1-4; Ha2
Mus musculus	RefSeq	ILMN_192877	ILMN_240754	ZFP295	NM_001081684.1	NM_001081684.1		114565	126157491	NM_001081684.1	Zfp295	NP_001075153.1	ILMN_1252524	005420576	S	3453	GCAGGCCCTTGGCTTGTAAACTGTGTCCTAAGACAGAATATTTGAAAAAA	16	-	98170964-98171013	16qC4	Mus musculus zinc finger protein 295 (Zfp295), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Znf295; B430213I24Rik; 5430437K12Rik; mKIAA1227	Znf295; B430213I24Rik; 5430437K12Rik; mKIAA1227
Mus musculus	RefSeq	ILMN_192877	ILMN_240754	ZFP295	NM_001081684.1	NM_001081684.1		114565	126157491	NM_001081684.1	Zfp295	NP_001075153.1	ILMN_1253569	004540600	S	3809	AAAAAACATACAAGGAAGAAGGGGAGTCATTTGCAGTATTGAGTCAGATT	16	-	98170608-98170657	16qC4	Mus musculus zinc finger protein 295 (Zfp295), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Znf295; B430213I24Rik; 5430437K12Rik; mKIAA1227	Znf295; B430213I24Rik; 5430437K12Rik; mKIAA1227
Mus musculus	RefSeq	ILMN_199279	ILMN_199279	LOC331369	XM_285680.2	XM_285680.2			38093806	XM_285680.2	LOC331369		ILMN_2534676	005900687	S	86	TGGAGCTCTTTGACACATTATTGGAGCACTCTGACATCACAGTGGAGCAT										
Mus musculus	RefSeq	ILMN_206549	ILMN_240249	LOC674599	XM_978736.1	XM_978736.1		674599	94398502	XM_978736.1	LOC674599	XP_983830.1	ILMN_1236167	007550736	S	458	CTTGTGCATAGGTCTTCTTGTCATCCTGCTGGCTTGCTTTGCTACAGGGG					PREDICTED: Mus musculus hypothetical protein LOC674599 (LOC674599), mRNA.					
Mus musculus	RefSeq	ILMN_193997	ILMN_240812	H2-OB	NM_010389.3	NM_010389.3		15002	85861232	NM_010389.3	H2-Ob	NP_034519.2	ILMN_2670690	006760167	S	1013	CTCAGTAGTCCCTCGTTTCCAGGACATGGTCCAGAAACTTCCTTAGGACC	17	+	34379538-34379587	17qB1	Mus musculus histocompatibility 2, O region beta locus (H2-Ob), mRNA.	A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		H-2Ob; H2-IAb2; H2-Ab; Ob; H-2I; H2-Ab2; H-2Ab	H-2Ob; H2-IAb2; H2-Ab; Ob; H-2I; H2-Ab2; H-2Ab
Mus musculus	RefSeq	ILMN_217051	ILMN_217051	AGTR1B	NM_175086.2	NM_175086.2		11608	31341262	NM_175086.2	Agtr1b	NP_780295.1	ILMN_2678559	003850162	S	1907	ACCTCAGTCATAAAGTCAAACTGCTGTGATTCTCTCCCAGGTAACTGTGT	3	-	20213585-20213634	3qA2	Mus musculus angiotensin II receptor, type 1b (Agtr1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which angiotensinogen metabolites in the bloodstream modulate the force with which blood passes through the circulatory system. The process begins when renin is released and cleaves angiotensinogen [goid 1991] [evidence IGI]; The process by which an angiotensin-mediated signaling system present in the brain regulates the force with which blood passes through the circulatory system [goid 2035] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The specific actions or reactions of an organism relating to the intake of liquids, especially water [goid 42756] [evidence IGI]; The specific actions or reactions of an organism relating to the intake of liquids, especially water [goid 42756] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with bradykinin to initiate a change in cell activity [goid 4947] [evidence IEA];  [goid 4945] [evidence IEA]	AT2R1B; MGC129325; Angtr-1b; Agtr-1b; AT1B	AT2R1B; MGC129325; Angtr-1b; Agtr-1b; AT1B
Mus musculus	RefSeq	ILMN_197535	ILMN_261242	AU017455	NM_001033215.2	NM_001033215.2		105590	142380837	NM_001033215.2	AU017455	NP_001028387.1	ILMN_1229377	006520626	S	2331	AAGCACAAGGTGAGACTGCAGAGACGAGAAGGTGGTGATGGACAAACATG	14	-	79612461-79612510	14qD3	Mus musculus expressed sequence AU017455 (AU017455), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_197405	ILMN_245275	G630016G05RIK	XR_001639.2	XR_001639.2		654793	149249573	XR_001639.2	G630016G05Rik		ILMN_1239485	004730113	S	455	GCCATCTGAGGCAAGACCCCTGGGAGGACACATGATGCTTGGAGAGAGTA				2qE5	PREDICTED: Mus musculus RIKEN cDNA G630016G05 gene (G630016G05Rik), misc RNA.					
Mus musculus	MEEBO	ILMN_186465	ILMN_186465	2700062C07RIK	scl52181.5_527				31980906	NM_026529	2700062C07Rik		ILMN_1251763	000650019	S	28	GCGTCCGCGGACGCGTGGGTTTCGCAGCGTTTGAGCGACTGAGTTCTCGA										
Mus musculus	RefSeq	ILMN_199264	ILMN_199264	LOC245108	XM_142516.2	XM_142516.2			38093556	XM_142516.2	LOC245108		ILMN_2534621	003520482	S	1293	TGGAGAGAAACCTCATGAGTGTAATCAGTGTGGTAAAGCCTTTGCAGTTC										
Mus musculus	MEEBO	ILMN_191335	ILMN_191335	NGFR	scl39687.7_423				15082264	NM_033217	Ngfr		ILMN_2635314	000010039	S	1077	ACATCTCGCAGGCGAGCTGGGCTACCAGCCGGAGCATATAGACTCCTTTA						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42488] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The series of events in which a temperature stimulus (hot or cold) is received and converted into a molecular signal [goid 16048] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of hair follicle development [goid 51799] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40037] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with nerve growth factor [goid 48406] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 5035] [evidence IDA]		
Mus musculus	MEEBO	ILMN_191335	ILMN_191335	NGFR	scl39687.7_423				15082264	NM_033217	Ngfr		ILMN_1231408	001470437	S	1076	GACATCTCGCAGGCGAGCTGGGCTACCAGCCGGAGCATATAGACTCCTTT						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42488] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The series of events in which a temperature stimulus (hot or cold) is received and converted into a molecular signal [goid 16048] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of hair follicle development [goid 51799] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40037] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with nerve growth factor [goid 48406] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 5035] [evidence IDA]		
Mus musculus	RefSeq	ILMN_232015	ILMN_232015	CDH19	NM_001081386.1	NM_001081386.1		227485	124487064	NM_001081386.1	Cdh19	NP_001074855.1	ILMN_3125113	007380112	A	1248	GCCATGTGGATGAAGAGCTTGCACCTGCCCATGTTAACGCTTCCACAACC	1	-	112821721-112821770	1qE2.1	Mus musculus cadherin 19, type 2 (Cdh19), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196964	ILMN_232015	CDH19	NM_001081386.1	NM_001081386.1		227485	124487064	NM_001081386.1	Cdh19	NP_001074855.1	ILMN_1230321	000290075	S	2401	TGAGGGAACAGGGTCATCAGCTGGCTCTCTGAGCTCCTTGGCATCCAGAG	1	-	112786375-112786424	1qE2.1	Mus musculus cadherin 19, type 2 (Cdh19), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	Riken	ILMN_202517	ILMN_202517	1500002K03RIK	ri|1500002K03|ZX00081A09|AK005121|1022					AK005121	1500002K03Rik		ILMN_1218596	000070056	S	174	CGCCAGCGGCGAAAGGGGATGTCTATAGGTGATAAGTAGGTTTCTCCAGG										
Mus musculus	RefSeq	ILMN_217468	ILMN_217468	GDPD1	NM_025638.1	NM_025638.1		66569	23956139	NM_025638.1	Gdpd1	NP_079914.1	ILMN_2683528	004280274	S	2194	CGTCTTTTGCCTAAATTATGTCTCTGCTGTGGGGCCTGCCACGCACAGCT	11	-	86847447-86847496	11qC	Mus musculus glycerophosphodiester phosphodiesterase domain containing 1 (Gdpd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	2610020H15Rik; RP23-352L3.1	2610020H15Rik; RP23-352L3.1
Mus musculus	RefSeq	ILMN_213658	ILMN_213658	MAP2K5	NM_011840.2	NM_011840.2		23938	118130017	NM_011840.2	Map2k5	NP_035970.1	ILMN_2639375	006020477	S	1992	AGCCGTGACCCCTCTGTCTGCTGTACTGGCCCAGCCTCCTGCTCGCACCT	9	-	63011793-63011842	9qC	Mus musculus mitogen-activated protein kinase kinase 5 (Map2k5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Prkmk5; AI324775; AI428457; MEK5; Mapkk5	Prkmk5; AI324775; AI428457; MEK5; Mapkk5
Mus musculus	RefSeq	ILMN_197082	ILMN_231439	LOC620635	XM_987715.1	XM_987715.1		620635	94410464	XM_987715.1	LOC620635	XP_992809.1	ILMN_1236590	004640477	S	332	GCAGCCAAGATCCTCCTTCCAGCTCCTCTGCAGATACCAGTGGAGGACAG					PREDICTED: Mus musculus similar to translocated promoter region protein (LOC620635), mRNA.					
Mus musculus	RefSeq	ILMN_214238	ILMN_214238	CCDC39	NM_026222.2	NM_026222.2		51938	114687665	NM_026222.2	Ccdc39	NP_080498.1	ILMN_2696774	006590411	S	3317	AAGATTTATTCTATCTCTCAATAATGAAGTTTTCATTTACTCTAGATCAC	3	-	33711532-33711581	3qA3	Mus musculus coiled-coil domain containing 39 (Ccdc39), mRNA.				4921507O14Rik; AI447426; D3Ertd789e	4921507O14Rik; AI447426; D3Ertd789e
Mus musculus	RefSeq	ILMN_214238	ILMN_214238	CCDC39	NM_026222.2	NM_026222.2		51938	114687665	NM_026222.2	Ccdc39	NP_080498.1	ILMN_2645827	006940113	S	3487	ATGTGTAACCAAAACACAGCATCATTCCCACTCCCTCAGGAAAAAGTTTA	3	-	33711362-33711411	3qA3	Mus musculus coiled-coil domain containing 39 (Ccdc39), mRNA.				4921507O14Rik; AI447426; D3Ertd789e	4921507O14Rik; AI447426; D3Ertd789e
Mus musculus	RefSeq	ILMN_214238	ILMN_214238	CCDC39	NM_026222.2	NM_026222.2		51938	114687665	NM_026222.2	Ccdc39	NP_080498.1	ILMN_3004786	004390010	S	2749	CCCAGTCTTCCTCCCTTTCATCATTCAGGTCGCTCGAGGATGTAACTCTC	3	-	33712100-33712122:33713112-33713138	3qA3	Mus musculus coiled-coil domain containing 39 (Ccdc39), mRNA.				4921507O14Rik; AI447426; D3Ertd789e	4921507O14Rik; AI447426; D3Ertd789e
Mus musculus	RefSeq	ILMN_247023	ILMN_247023	OLFR111	NM_001005485.1	NM_001005485.1		545205	70794757	NM_001005485.1	Olfr111	NP_001005485.1	ILMN_2967322	003940551	S	437	CCTCATGCTGGACATGTGGGTTTCTCAACTCAGTGTTGCACACCGTTCTG	17	+	37667360-37667409	17qB1	Mus musculus olfactory receptor 111 (Olfr111), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR249-1P	MOR249-1P
Mus musculus	MEEBO	ILMN_189754	ILMN_189754	2010015P12RIK	scl070189.1_41						2010015P12Rik		ILMN_1239523	007610075	S	20	GCAACGCTGCGTTGCGCCTAGAGGGCAGGCGAGCCGTTTTCCCTTCTTTT										
Mus musculus	Riken	ILMN_205614	ILMN_205614	B930088G14RIK	ri|B930088G14|PX00166P23|AK047561|3004					AK047561	B930088G14Rik		ILMN_2573912	003800326	S	2842	GTGGAAAAAGTAGAAGGGCTGAGGGACCCTTACAGGACAAGGACTCCACC										
Mus musculus	RefSeq	ILMN_254932	ILMN_254932	BEX2	NM_009749.1	NM_009749.1		12069	6753183	NM_009749.1	Bex2	NP_033879.1	ILMN_3065164	003400564	I	67	TGGAAACCGAGAGTCCAGGCGGCAGCGGGAATTGACAGGAGGACTACGCC	X	-	132602155-132602204	XqF1	Mus musculus brain expressed X-linked 2 (Bex2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AL024066; Bex1	AL024066; Bex1
Mus musculus	RefSeq	ILMN_254932	ILMN_254932	BEX2	NM_009749.1	NM_009749.1		12069	6753183	NM_009749.1	Bex2	NP_033879.1	ILMN_3143078	001110162	A	243	TCCGATTGTGGCCCTGCCTTTCGAAGCTGGAGACTACTACGTGCCTAGAG	X	-	132601587-132601636	XqF1	Mus musculus brain expressed X-linked 2 (Bex2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AL024066; Bex1	AL024066; Bex1
Mus musculus	RefSeq	ILMN_217579	ILMN_251407	EG654432	NR_002700.1	NR_002700.1		654432	84781715	NR_002700.1	EG654432		ILMN_2685011	000380291	S	1010	TGGGCAAAACCATCAGACTTATTTTTATAGAAAAGCTATTGAGAATAATC	17	+	50838855-50838904	17qC	Mus musculus predicted gene, EG654432 (EG654432), non-coding RNA.					
Mus musculus	RefSeq	ILMN_251407	ILMN_251407	EG654432	NR_002700.1	NR_002700.1		654432	84781715	NR_002700.1	EG654432		ILMN_2945956	002760735	S	1316	GTGTGAAATCATGTAGTTGCAAATAAAAAGTAGTTTGAGGCATGAAAAAA	17	+	50839161-50839210	17qC	Mus musculus predicted gene, EG654432 (EG654432), non-coding RNA.					
Mus musculus	RefSeq	ILMN_259415	ILMN_259415	4930579J09RIK	NM_133689.1	NM_133689.1		67752	19526857	NM_133689.1	4930579J09Rik	NP_598450.1	ILMN_2915642	001110722	S	1139	GGGTACTTCGAGAATATCCCCAAGGGGCTGGATCGAGAAGGCTGGACTCG	19	-	10549543-10549591:10551518-10551518	19qA	Mus musculus RIKEN cDNA 4930579J09 gene (4930579J09Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU015816; MGC144717; IIIG9L; IIIG9; IIIG9S	AU015816; MGC144717; IIIG9L; IIIG9; IIIG9S
Mus musculus	MEEBO	ILMN_210497	ILMN_210497	A230067G21RIK	scl18558.16.1_73	XM_141404.3			38075143	XM_141404.3	A230067G21Rik		ILMN_1241312	000630347	S	3626	AGGCAGGCTCTGATTAATGATCTTCTAGGTATTTGAGGGCCATGTGGCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213023	ILMN_234912	UTP18	NM_001013375.1	NM_001013375.1		217109	61656179	NM_001013375.1	Utp18	NP_001013393.1	ILMN_2632757	006250358	S	1842	TAATATATGAATAATGATTTGTGGAATTTAGCAGCAGTGTCTTAATAAAT	11	-	93721278-93721327	11qD	Mus musculus UTP18, small subunit (SSU) processome component, homolog (yeast) (Utp18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		MGC141454; 6430513M13; 6230425C22Rik; Wdr50; MGC141453	MGC141454; 6430513M13; 6230425C22Rik; Wdr50; MGC141453
Mus musculus	RefSeq	ILMN_225319	ILMN_225319	YPEL5	NM_027166.3	NM_027166.3		383295	47271513	NM_027166.3	Ypel5	NP_081442.1	ILMN_2951446	006760008	S	2596	CTGGTAAGGCGTGGCTCAATTGTAGTGTTTGCTTAGTGTGCTGGAAGACC	17	+	72755922-72755971	17qE1.3	Mus musculus yippee-like 5 (Drosophila) (Ypel5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CGI-127; 2310076K21Rik	CGI-127; 2310076K21Rik
Mus musculus	RefSeq	ILMN_200614	ILMN_200614	LOC384400	XM_357622.1	XM_357622.1			38084293	XM_357622.1	LOC384400		ILMN_2539380	005810431	S	360	TCTATCAAAAACTTCCTTGCCTGGGGCAGCCCAGCTGACAATGTGCAATC										
Mus musculus	RefSeq	ILMN_211585	ILMN_211585	2410129H14RIK	NM_175245.3	NM_175245.3		76789	141801229	NM_175245.3	2410129H14Rik	NP_780454.1	ILMN_2617381	004210397	S	795	TTGTTTTTTACCCAGTTTTTGGCAGTTAAAGGTGTAAAGAAGATCATTTT	14	-	99435118-99435167	14qE2.2	Mus musculus RIKEN cDNA 2410129H14 gene (2410129H14Rik), mRNA.				AI120158	AI120158
Mus musculus	RefSeq	ILMN_200240	ILMN_200240	LOC386046	XM_359043.1	XM_359043.1			38081049	XM_359043.1	LOC386046		ILMN_1240152	000460367	S	582	TGCCTGCAACGGCACATGTGGCTTCCCACAATCTTCTGCTACATATGCAG										
Mus musculus	RefSeq	ILMN_214194	ILMN_255097	4932415M13RIK	NM_001037718.2	NM_001037718.2		211496	144226231	NM_001037718.2	4932415M13Rik	NP_001032807.1	ILMN_2645373	007040497	S	1078	TCCCCCATACTCACCCAAAACTGCCCAGAGAGGATGCCCAATTCAGATGA	17	+	53864153-53864202	17qC	Mus musculus RIKEN cDNA 4932415M13 gene (4932415M13Rik), transcript variant 1, mRNA.			Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC130367	MGC130367
Mus musculus	RefSeq	ILMN_199939	ILMN_199939	LOC381585	XM_355544.1	XM_355544.1			38079085	XM_355544.1	LOC381585		ILMN_1227797	003140647	S	609	CACAGCCCTGCCTGTGACAACTGTGGGCCTCTGATATAGGTCCAGTGGTC										
Mus musculus	RefSeq	ILMN_213230	ILMN_213230	RIPK2	NM_138952.3	NM_138952.3		192656	142347210	NM_138952.3	Ripk2	NP_620402.1	ILMN_2634970	006400403	S	1615	GTGCAGAAGTTGAAAGATAACAAGCAGCTGGGGCTGCAGCCTTACCCAGA	4	-	16050758-16050807	4qA2	Mus musculus receptor (TNFRSF)-interacting serine-threonine kinase 2 (Ripk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	RIP2; D4Bwg0615e; 2210420D18Rik; RICK; CARDIAK; CARD3; CCK	RIP2; D4Bwg0615e; 2210420D18Rik; RICK; CARDIAK; CARD3; CCK
Mus musculus	RefSeq	ILMN_213230	ILMN_213230	RIPK2	NM_138952.3	NM_138952.3		192656	142347210	NM_138952.3	Ripk2	NP_620402.1	ILMN_1241902	004250451	S	348	GGGAATTTGCAATGAGCCTGAATTTTTGGGCATAGTTACTGAATACATGC	4	-	16085455-16085504	4qA2	Mus musculus receptor (TNFRSF)-interacting serine-threonine kinase 2 (Ripk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	RIP2; D4Bwg0615e; 2210420D18Rik; RICK; CARDIAK; CARD3; CCK	RIP2; D4Bwg0615e; 2210420D18Rik; RICK; CARDIAK; CARD3; CCK
Mus musculus	MEEBO	ILMN_213006	ILMN_213006	4930532M18RIK	scl17353.3.1_174				51705286	XM_488917	4930532M18Rik		ILMN_2632556	006960519	S	858	TATAATCCAACATTTGTCTTTTGAGGACTGACAATTTCTTTAATATGACC										
Mus musculus	RefSeq	ILMN_251723	ILMN_251723	EG574415	NR_002872.1	NR_002872.1		574415	84872166	NR_002872.1	EG574415		ILMN_2963926	001450341	S	2	TGATCATGAAGCATGAGGAGAAGGAGCAGATCAAGTGTCTCAACAGCAGG	15	+	101334248-101334297	15qF2	Mus musculus predicted gene, EG574415 (EG574415), non-coding RNA.				Kb32p	Kb32p
Mus musculus	RefSeq	ILMN_243846	ILMN_243846	AU014645	NM_001033201.3	NM_001033201.3		433702	144922626	NM_001033201.3	AU014645	NP_001028373.2	ILMN_3162184	002000156	S	2586	GCAGATCTTCCTACAGCATCACCAGACCATCCAGCAGTACATGGTGACCC	4	+	46183442-46183457:46184765-46184798	4qB1	Mus musculus expressed sequence AU014645 (AU014645), mRNA. XM_899103 XM_899107 XM_907156 XM_920218 XM_920231 XM_920251 XM_920260 XM_920269 XM_920279			Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	Ncbp1; AW538051	Ncbp1; AW538051
Mus musculus	RefSeq	ILMN_198284	ILMN_198284	LOC332300	XM_288828.2	XM_288828.2			38083629	XM_288828.2	LOC332300		ILMN_2531139	001990164	S	1455	AGGAGGTGTTTGGGAAGGATAATCCCTATGAGAAGCAATGCCGAGTAGGC										
Mus musculus	RefSeq	ILMN_208675	ILMN_313934	8030423J24RIK	XM_001474002.1	XM_001474002.1		77166	149264498	XM_001474002.1	8030423J24Rik	XP_001474052.1	ILMN_1241935	004050332	S	561	CCATCGGAAAGTCATTGTATTTTTAGCAGGTTCCAAAATAGATAGCAACC				13qC1	PREDICTED: Mus musculus RIKEN cDNA 8030423J24 gene (8030423J24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196755	ILMN_196755	KLRA15	NM_013793.2	NM_013793.2		27423	7549770	NM_013793.2	Klra15	NP_038821.2	ILMN_1233185	004760438	S	757	TGTGGGAAGAGATTGGACAAATTCCCTCATTGACTCTCTGACAAGTGTTA					Mus musculus killer cell lectin-like receptor, subfamily A, member 15 (Klra15), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ly49O	Ly49O
Mus musculus	MEEBO	ILMN_222523	ILMN_222523	2210013O21RIK	scl54529.5.1_150				51772509	XM_489371	2210013O21Rik		ILMN_2750864	000620647	S	936	CTGCAGAAGCTTGTCATTGCACTCTTTTGTTGACACCCAGTCTTTGCTGT										
Mus musculus	RefSeq	ILMN_190096	ILMN_232602	GABBR1	NM_019439.2	NM_019439.2		54393	29648318	NM_019439.2	Gabbr1	NP_062312.2	ILMN_1220286	006560450	S	3993	CCTTAGGTTCATCTGCAAATGTTCCCTCTGTTCTTTGCTCTCGTGCGTCC	17	+	36682079-36682128	17qB1	Mus musculus gamma-aminobutyric acid (GABA-B) receptor, 1 (Gabbr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-B receptors are G-protein coupled receptors [goid 4965] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	bM573K1.1; GABAbR1	bM573K1.1; GABAbR1
Mus musculus	RefSeq	ILMN_191976	ILMN_241898	TMEM185B	NM_146103.1	NM_146103.1		226351	22122616	NM_146103.1	Tmem185b	NP_666215.1	ILMN_2696272	004070097	S	1871	AGTGCTCCTACTGTTCAAATAGTTGTTTTCTGTGGGCTTTGCGGACACAG	1	+	121424614-121424663	1qE2.3	Mus musculus transmembrane protein 185B (Tmem185b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC25511; 2500001K11Rik	MGC25511; 2500001K11Rik
Mus musculus	RefSeq	ILMN_200022	ILMN_200022	LOC383118	XM_356884.1	XM_356884.1			38079885	XM_356884.1	LOC383118		ILMN_2537321	005820156	S	241	AACCAGCGCACGCACCTCACCCGCCACCTCTACGGCCACACGGGTGAGAG										
Mus musculus	RefSeq	ILMN_213287	ILMN_213287	SEMA3F	NM_011349.3	NM_011349.3		20350	141801980	NM_011349.3	Sema3f	NP_035479.2	ILMN_2685037	006290017	S	678	GCCTGAGAAACTGGAGTCAGGAAAAGGCAAATGTCCCTATGACCCCAAGC	9	-	107592040-107592089	9qF1	Mus musculus sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F (Sema3f), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IDA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]	Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal [goid 45499] [evidence IDA]	Semak; Sema IV; Sema4	Semak; Sema IV; Sema4
Mus musculus	RefSeq	ILMN_213287	ILMN_213287	SEMA3F	NM_011349.3	NM_011349.3		20350	141801980	NM_011349.3	Sema3f	NP_035479.2	ILMN_1248740	006560487	S	3337	CCCAGGCCACAGCCACTCTTGGGTTCCATCTTGCTAATAAATGCTGGCTC	9	-	107583839-107583888	9qF1	Mus musculus sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F (Sema3f), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IDA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]	Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal [goid 45499] [evidence IDA]	Semak; Sema IV; Sema4	Semak; Sema IV; Sema4
Mus musculus	RefSeq	ILMN_223077	ILMN_223077	FBXW19	NM_177703.3	NM_177703.3		235612	142382879	NM_177703.3	Fbxw19	NP_808371.1	ILMN_1230055	005490392	S	1323	GTGATGAATCAAGCATAATTTTAGTGATGACTAGTAGTCCCATTCCCTGC	9	-	109381178-109381227	9qF2	Mus musculus F-box and WD-40 domain protein 19 (Fbxw19), mRNA.				E330023O18	E330023O18
Mus musculus	RefSeq	ILMN_198763	ILMN_258129	LOC631980	XM_905950.2	XM_905950.2		631980	94408182	XM_905950.2	LOC631980	XP_911043.2	ILMN_1258007	006940220	S	186	CTGTCTCCATATGGGGTCACTGAGAATACTAGAGCCTCAACATGAACTCC					PREDICTED: Mus musculus similar to AV320801 protein (LOC631980), mRNA.					
Mus musculus	RefSeq	ILMN_199603	ILMN_199603	LOC383729	XM_357213.1	XM_357213.1			38074951	XM_357213.1	LOC383729		ILMN_1223386	007200008	S	545	TGTTGATTGAGAAGGGTTCTGACAGCTTGATGGTGTGGCTGCTGGTGGCC										
Mus musculus	RefSeq	ILMN_209207	ILMN_209207	D630042P16RIK	NM_175525.2	NM_175525.2		243612	31342101	NM_175525.2	D630042P16Rik	NP_780734.1	ILMN_2894604	000730246	S	1261	CACACAGTAGATGGGAAGCCCTGGAGCCCTGAGTCGGTGCAGGCCATTAA	6	-	112325111-112325160	6qE3	Mus musculus RIKEN cDNA D630042P16 gene (D630042P16Rik), mRNA.				Fls485	Fls485
Mus musculus	RefSeq	ILMN_199398	ILMN_199398	OLFR392	NM_147006.2	NM_147006.2		259008	153945718	NM_147006.2	Olfr392	NP_667217.2	ILMN_2637378	006180324	S	937	GAAGAAAACTGCCATGGCTTTGATGTATACATTGGTGACTCCCATGCTCA				11qB4	Mus musculus olfactory receptor 392 (Olfr392), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR135-9; RP23-180L15.7	MOR135-9; RP23-180L15.7
Mus musculus	RefSeq	ILMN_199398	ILMN_199398	OLFR392	NM_147006.2	NM_147006.2		259008	153945718	NM_147006.2	Olfr392	NP_667217.2	ILMN_1216087	006770328	S	982	GCTCAACCCCTTCATCTACAGCCTTAGGAACAGAGACATAAAGAGGGCCC				11qB4	Mus musculus olfactory receptor 392 (Olfr392), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR135-9; RP23-180L15.7	MOR135-9; RP23-180L15.7
Mus musculus	RefSeq	ILMN_192555	ILMN_234602	ADAR	NM_019655.2	NM_019655.2		56417	31981008	NM_019655.2	Adar	NP_062629.2	ILMN_2704372	000070348	S	3611	TACCAAGAACTGCTTTCTTTGGGATTTCGAGGTGGGGTCCAGCCAAGTCC	3	+	89555222-89555271	3qF1	Mus musculus adenosine deaminase, RNA-specific (Adar), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s) [goid 16553] [evidence ISO]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags [goid 3692] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	mZaADAR; Adar1; AV242451	mZaADAR; Adar1; AV242451
Mus musculus	RefSeq	ILMN_196373	ILMN_196373	4932408L24RIK	XM_162190.1	XM_162190.1			20840413	XM_162190.1	4932408L24Rik		ILMN_1215122	002000743	S	4067	CTTGTGCCCAAATCAAGCTGCAGATGCCCAGTGGGGACCAAGGTGTAGCC										
Mus musculus	RefSeq	ILMN_193653	ILMN_218349	KLRB1F	NM_181064.3	NM_181064.3		232408	142379697	NM_181064.3	Klrb1f	NP_851409.1	ILMN_2604651	002100671	S	741	ATTACTTCACTGTCCACATCGGATCTCTGTACTGAACATTCTGTTGGCCC	6	+	129006522-129006571	6qF3	Mus musculus killer cell lectin-like receptor subfamily B member 1F (Klrb1f), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC130065; MGC130066; Nkrp1-f; NKR-P1F; Nkrp1f; A630024B12Rik	MGC130065; MGC130066; Nkrp1-f; NKR-P1F; Nkrp1f; A630024B12Rik
Mus musculus	RefSeq	ILMN_218349	ILMN_218349	KLRB1F	NM_181064.3	NM_181064.3		232408	142379697	NM_181064.3	Klrb1f	NP_851409.1	ILMN_2694646	004050148	S	1180	CGCCAACTAGTTGACTAATAATGGACTAATGCTGTGTTCGACATTGAGTG	6	+	129006961-129007010	6qF3	Mus musculus killer cell lectin-like receptor subfamily B member 1F (Klrb1f), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC130065; MGC130066; Nkrp1-f; NKR-P1F; Nkrp1f; A630024B12Rik	MGC130065; MGC130066; Nkrp1-f; NKR-P1F; Nkrp1f; A630024B12Rik
Mus musculus	RefSeq	ILMN_219086	ILMN_219086	EG328231	NM_177808.3	NM_177808.3		328231	141802768	NM_177808.3	EG328231	NP_808476.1	ILMN_2704096	000270347	S	1457	TCAGCAAATGAAGGTTGAATATACTTAGCACGAAGTTATAAATACAAACG	13	+	41752008-41752057	13qA4	Mus musculus predicted gene, EG328231 (EG328231), mRNA.				A030008J09	A030008J09
Mus musculus	RefSeq	ILMN_219729	ILMN_219729	TIMP2	NM_011594.3	NM_011594.3		21858	61835847	NM_011594.3	Timp2	NP_035724.2	ILMN_2712867	002070152	S	3335	CGCTGCCTGATGCGTATTAAGACATATCCGTGGGCTTGCTGCATAACTCA	11	-	118162612-118162661	11qE2	Mus musculus tissue inhibitor of metalloproteinase 2 (Timp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IDA]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30814] [evidence IDA]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43408] [evidence IDA]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [evidence IMP]; Interacting selectively with an integrin [goid 5178] [evidence IDA]; Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence TAS]; Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IMP]	Timp-2; D11Bwg1104e	Timp-2; D11Bwg1104e
Mus musculus	RefSeq	ILMN_217407	ILMN_323171	LOC100046777	XM_001476788.1	XM_001476788.1		100046777	149260474	XM_001476788.1	LOC100046777	XP_001476838.1	ILMN_2682859	000990646	S	1640	CATACACAAACTGCACCCCAGTACCACGGCTGAGTCAGGGTCGCTCTCAG					PREDICTED: Mus musculus similar to organic cation transporter-like 3 (LOC100046777), mRNA.					
Mus musculus	RefSeq	ILMN_224060	ILMN_231419	HOXB9	NM_008270.2	NM_008270.2		15417	113680759	NM_008270.2	Hoxb9	NP_032296.2	ILMN_2773921	004050113	S	1863	CCCCATTTGACAGAATGTAACTTTTCTTGCTGACCACAGTCTCAGATTCC	11	+	96137071-96137120	11qD	Mus musculus homeo box B9 (Hoxb9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC124052; MGC124054; MGC124051; MGC124053; Hox-2.5	MGC124052; MGC124054; MGC124051; MGC124053; Hox-2.5
Mus musculus	RefSeq	ILMN_209873	ILMN_209873	HEG1	NM_172934.4	NM_172934.4		77446	153791279	NM_172934.4	Heg1	NP_766522.1	ILMN_2600022	004900224	S	3075	CCACCTCCGAGGAGGTCTCTGCTTATTATGATGCCTGTAACACACAGAAG				16qB3	Mus musculus HEG homolog 1 (zebrafish) (Heg1), transcript variant 2, mRNA.				BC038614; 5530401I02Rik; 4632417D23Rik; 9530025L16Rik; Gm629	BC038614; 5530401I02Rik; 4632417D23Rik; 9530025L16Rik; Gm629
Mus musculus	RefSeq	ILMN_196144	ILMN_196144	TUSC2	NM_019742.4	NM_019742.4		80385	146135058	NM_019742.4	Tusc2	NP_062716.1	ILMN_2522023	001940546	S	1003	TCACCCTTCCTGCCTACCTACCACATGCTCCCGCTCTTAAGCTGGACACT				9qF1	Mus musculus tumor suppressor candidate 2 (Tusc2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA407686; Lgcc; Fus1; 1190001E22Rik; PAP; Pdap2	AA407686; Lgcc; Fus1; 1190001E22Rik; PAP; Pdap2
Mus musculus	RefSeq	ILMN_190042	ILMN_246139	ERRFI1	NM_133753.1	NM_133753.1		74155	19526961	NM_133753.1	Errfi1	NP_598514.1	ILMN_2714031	004570368	S	2673	GGCTGCTTCACTGCCCTGAGATTCAGTGAGACACGCAGTTTGTGTTCAGT	4	+	150242644-150242693	4qE2	Mus musculus ERBB receptor feedback inhibitor 1 (Errfi1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	A series of molecular signals in which a stress-activated protein kinase (SAPK) cascade relays one or more of the signals [goid 31098] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mig-6; 1300002F13Rik; Mig6; AI788755; RALT	Mig-6; 1300002F13Rik; Mig6; AI788755; RALT
Mus musculus	RefSeq	ILMN_221362	ILMN_221362	ABCC12	NM_172912.4	NM_172912.4		244562	118129935	NM_172912.4	Abcc12	NP_766500.3	ILMN_1246917	005560632	S	4377	GGTCCCTCACGTGTCCTCACCAATACTACATAATGTCTGAGAATGGGAAC	8	-	89028824-89028873	8qC3	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 12 (Abcc12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	MRP9; 4930467B22Rik	MRP9; 4930467B22Rik
Mus musculus	RefSeq	ILMN_201626	ILMN_329562	LOC100045796	XM_001474949.1	XM_001474949.1		100045796	149254270	XM_001474949.1	LOC100045796	XP_001474999.1	ILMN_1230720	006620170	S	374	GCACGAAGGACTGTGAGGAGTTCCAGTCAGTGGTCTATGTGACCTATTTC					PREDICTED: Mus musculus similar to Nitrogen fixation gene 1 (S. cerevisiae) (LOC100045796), mRNA.					
Mus musculus	MEEBO	ILMN_190329	ILMN_190329	B230345P09RIK	scl00319536.1_287						B230345P09Rik		ILMN_2469190	005810193	S	9	CCGTCACATTCTCCATGTTCTGGCTTACTTTTACTTGTAGGCTGCTCCAG										
Mus musculus	RefSeq	ILMN_215268	ILMN_215268	PHKB	NM_199446.1	NM_199446.1		102093	40789095	NM_199446.1	Phkb	NP_955517.1	ILMN_2807757	007400181	S	4256	GGTTGATGGGCAGGGAAGAGAAATTAAAGAACGAGAGGGAGGAAAAGCCC	8	+	88584180-88584229	8qC3	Mus musculus phosphorylase kinase beta (Phkb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	MGC62514; AI463271	MGC62514; AI463271
Mus musculus	RefSeq	ILMN_215268	ILMN_215268	PHKB	NM_199446.1	NM_199446.1		102093	40789095	NM_199446.1	Phkb	NP_955517.1	ILMN_2657421	001500653	S	4061	TACAGAAGTGCCAGTCAGACAGAGCTGGGAATCATGATACAATCCAGCCT	8	+	88583985-88584034	8qC3	Mus musculus phosphorylase kinase beta (Phkb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	MGC62514; AI463271	MGC62514; AI463271
Mus musculus	RefSeq	ILMN_215268	ILMN_215268	PHKB	NM_199446.1	NM_199446.1		102093	40789095	NM_199446.1	Phkb	NP_955517.1	ILMN_1240699	005360504	S	124	GCGTGCAACGCTTATGATAAGAATCAACAGTTTGAAATGGCCAACTCACC	8	+	88366924-88366959:88366960-88366973	8qC3	Mus musculus phosphorylase kinase beta (Phkb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	MGC62514; AI463271	MGC62514; AI463271
Mus musculus	RefSeq	ILMN_193815	ILMN_229610	4833446K15RIK	XM_980894.1	XM_980894.1		78923	94404908	XM_980894.1	4833446K15Rik	XP_985988.1	ILMN_1216568	002630437	S	3597	GTGCTAAGACACAGTCTTTATTCCCCTTATCTTCATCTCACCTCTGCTGA				18qD3	PREDICTED: Mus musculus RIKEN cDNA 4833446K15 gene, transcript variant 1 (4833446K15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200146	ILMN_317841	ATP13A3	XM_001480958.1	XM_001480958.1		224088	149267513	XM_001480958.1	Atp13a3	XP_001481008.1	ILMN_2537750	004390315	S	490	CAAAAATTCACTTTCTTCCTGTGGAGAATCAACCAAATTTGAATGCAAAA	16	-	30361995-30362044	16qB2	PREDICTED: Mus musculus ATPase type 13A3, transcript variant 1 (Atp13a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_197936	ILMN_317841	ATP13A3	XM_001480958.1	XM_001480958.1		224088	149267513	XM_001480958.1	Atp13a3	XP_001481008.1	ILMN_1256271	002480332	S	136	CGCGGCTGGTCTGACAGAAGCACCCTAGGATCTTGGTGTCTGGATACATA	16	-	30387696-30387738:30388434-30388440	16qB2	PREDICTED: Mus musculus ATPase type 13A3, transcript variant 1 (Atp13a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_197934	ILMN_317841	ATP13A3	XM_001480958.1	XM_001480958.1		224088	149267513	XM_001480958.1	Atp13a3	XP_001481008.1	ILMN_1258916	004670196	S	3266	GATTGTGATCTCCGTTGGATTTCAGTCGCTGGGTTTTTTCTGGGTCAAGC	16	-	30333872-30333921	16qB2	PREDICTED: Mus musculus ATPase type 13A3, transcript variant 1 (Atp13a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_203991	ILMN_203991	A630023D23RIK	ri|A630023D23|PX00145C16|AK041589|1252					AK041589	A630023D23Rik		ILMN_1215193	001070131	S	636	GTGCTCCTACGAAAACAGCAGAGGAAGCCCAGCAAGGGGAACAGCTTAAC										
Mus musculus	RefSeq	ILMN_200221	ILMN_200221	LOC385977	XM_359022.1	XM_359022.1			38080987	XM_359022.1	LOC385977		ILMN_1245818	003180575	S	180	TCTGCTAGGCTGTGAGATGGATCACTTGGAGCAAGAGGAGAAGAGAGACG										
Mus musculus	RefSeq	ILMN_257417	ILMN_257417	EG629678	NM_001037935.1	NM_001037935.1		629678	85702321	NM_001037935.1	EG629678	NP_001033024.1	ILMN_3162379	007400114	S	757	CCAAGTATTGACTGAAATCCCTGGCTAGACCTGATGAACACCTCCTTGTA	14	-	77879646-77879695	14qD3	Mus musculus predicted gene, EG629678 (EG629678), mRNA.					
Mus musculus	RefSeq	ILMN_219462	ILMN_219462	C3AR1	NM_009779.2	NM_009779.2		12267	147904678	NM_009779.2	C3ar1	NP_033909.1	ILMN_2709211	004670743	S	2843	CCTGGACCATGCTAATATAAAGTACTGTATGCAGCCAATTTTAAAGGAAC				6qF2	Mus musculus complement component 3a receptor 1 (C3ar1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with anaphylatoxin C3a to initiate a change in cell activity [goid 4943] [evidence IEA]; Combining with anaphylatoxin to initiate a change in cell activity [goid 4942] [evidence IEA]	HNFAG09; C3AR; AZ3B	HNFAG09; C3AR; AZ3B
Mus musculus	RefSeq	ILMN_250313	ILMN_250313	EG432982	NM_001034883.2	NM_001034883.2		432982	142376432	NM_001034883.2	EG432982	NP_001030055.1	ILMN_3161335	002450129	S	2102	GTGCAGCTGTAGCTGGCAAAGACCAGGTATACAGGGGTGTCCTATGAATG	15	+	100258363-100258412	15qF1	Mus musculus predicted gene, EG432982 (EG432982), mRNA.					
Mus musculus	RefSeq	ILMN_209445	ILMN_209445	DAPP1	NM_011932.2	NM_011932.2		26377	119672910	NM_011932.2	Dapp1	NP_036062.1	ILMN_2595822	004250537	S	769	CTCAGCTGTTCAATTTGATTACTCACAGGAACGAGTAAACTGTTTCTGCC	3	-	137598631-137598633:137600701-137600747	3qG3	Mus musculus dual adaptor for phosphotyrosine and 3-phosphoinositides 1 (Dapp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]		Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Bam32	Bam32
Mus musculus	RefSeq	ILMN_209445	ILMN_209445	DAPP1	NM_011932.2	NM_011932.2		26377	119672910	NM_011932.2	Dapp1	NP_036062.1	ILMN_1253354	003310487	S	1313	CTTCAGGACTTGCTACAAGCACAAGGAAACAGCAGTGCATCAGGGAGCTC	3	-	137595695-137595744	3qG3	Mus musculus dual adaptor for phosphotyrosine and 3-phosphoinositides 1 (Dapp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]		Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Bam32	Bam32
Mus musculus	MEEBO	ILMN_210619	ILMN_210619	RPL18	scl0019899.1_227	NM_009077.1			6677770	NM_009077.1	Rpl18		ILMN_1250334	005720195	S	459	GGCGAGATGTGTTCCCACATTTTGGGAAGGTCCCAGGTACTCCATACAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_215748	ILMN_215748	DMRTC2	NM_027732.1	NM_027732.1		71241	27532960	NM_027732.1	Dmrtc2	NP_082008.1	ILMN_1214790	003170471	S	1415	CTTGTAGCCCGTTTAAATACTAAGTCCCCCAATAAAGGCAGTTGGGCAGT	7	+	25662469-25662518	7qA3	Mus musculus doublesex and mab-3 related transcription factor like family C2 (Dmrtc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Dmrt7; 4933432E21Rik	Dmrt7; 4933432E21Rik
Mus musculus	RefSeq	ILMN_212612	ILMN_212612	ELL2	NM_138953.2	NM_138953.2		192657	116256446	NM_138953.2	Ell2	NP_620403.2	ILMN_2628426	002480746	S	3447	CTATCACTTGTCTTATCATGTGGGAACATAAGTTATGTGGTCAAAATATA	13	+	75909604-75909653	13qC1	Mus musculus elongation factor RNA polymerase II 2 (Ell2), mRNA. XM_922000 XM_922005 XM_922010 XM_992760 XM_992784 XM_992820 XM_992847	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Any activity that increases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 8159] [evidence ISO]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]		
Mus musculus	Riken	ILMN_206952	ILMN_206952	D630042J03RIK	ri|D630042J03|PX00198O05|AK085572|2875					AK085572	D630042J03Rik		ILMN_1217479	005050440	S	2608	CTCTGAGAAGCTCGGGACAGAACCGTTGGGCACGTATTGGGAGAGAAGTT										
Mus musculus	RefSeq	ILMN_217951	ILMN_217951	HAPLN3	NM_178255.3	NM_178255.3		67666	31982255	NM_178255.3	Hapln3	NP_839986.2	ILMN_1231791	000840446	S	1293	GGCTGAGTGTTTATCAGGTGGACCATTGTCCCTTGTGGGTTGGGGGATTG	7	-	86262003-86262052	7qD3	Mus musculus hyaluronan and proteoglycan link protein 3 (Hapln3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930554N11Rik; Lpr3; MGC124072	4930554N11Rik; Lpr3; MGC124072
Mus musculus	RefSeq	ILMN_199319	ILMN_199319	LOC272693	XM_195425.1	XM_195425.1			25031974	XM_195425.1	LOC272693		ILMN_1254784	001470255	S	3	GTCTTCTCACACCTTTGACACCAACAGCGACAACACCATCGACTTCCGAG										
Mus musculus	RefSeq	ILMN_212268	ILMN_212268	RBM6	NM_011251.2	NM_011251.2		19654	142357262	NM_011251.2	Rbm6	NP_035381.1	ILMN_1236336	002850221	S	1541	CCTTTCGAACTTCTGATGGCATACCTGTAAAGGACTTGCAGTTGAAGGAG	9	-	107749608-107749657	9qF1	Mus musculus RNA binding motif protein 6 (Rbm6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			mKIAA4015; g16; KIAA4015; NY-LU-12; 4930506F14Rik; Def-3	mKIAA4015; g16; KIAA4015; NY-LU-12; 4930506F14Rik; Def-3
Mus musculus	RefSeq	ILMN_212268	ILMN_212268	RBM6	NM_011251.2	NM_011251.2		19654	142357262	NM_011251.2	Rbm6	NP_035381.1	ILMN_2738475	002230367	S	1623	CGTGGAATTTTCACTCTTGGAAGATGCCATCGGATGCATGGAGGCCAACC	9	-	107735766-107735815	9qF1	Mus musculus RNA binding motif protein 6 (Rbm6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			mKIAA4015; g16; KIAA4015; NY-LU-12; 4930506F14Rik; Def-3	mKIAA4015; g16; KIAA4015; NY-LU-12; 4930506F14Rik; Def-3
Mus musculus	RefSeq	ILMN_214345	ILMN_214345	ARID4B	NM_194262.1	NM_194262.1		94246	37694071	NM_194262.1	Arid4b	NP_919238.1	ILMN_1249672	001010475	S	2045	AAAAATGTATGAAGCTAGTATAAAAGATTCTGATGTCGAAGGTGGAGAGG	13	+	14262360-14262409	13qA1	Mus musculus AT rich interactive domain 4B (RBP1-like) (Arid4b), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	BCAA; 6720480E17Rik; 5930400I17; BRCAA1; 6330417L24Rik; Rbp1l1; RBBP1L1; 9330186M13; SAP180	BCAA; 6720480E17Rik; 5930400I17; BRCAA1; 6330417L24Rik; Rbp1l1; RBBP1L1; 9330186M13; SAP180
Mus musculus	Riken	ILMN_206975	ILMN_206975	4933400A22RIK	ri|4933400A22|PX00641J14|AK077067|1287					AK077067	4933400A22Rik		ILMN_1246912	003310168	S	897	GTGCTGGCGCAGACCGAAGGTACTTGTCACCCAGAGGGCATGTTTGTGTT										
Mus musculus	RefSeq	ILMN_200467	ILMN_200467	LOC383238	XM_356939.1	XM_356939.1			38082324	XM_356939.1	LOC383238		ILMN_1222573	002370673	S	634	CAGACTCCAGCACTCACTTGTGCTGGTCTGGGTCGCTGCCAGGGTGGCCA										
Mus musculus	RefSeq	ILMN_191054	ILMN_251365	IRS1	NM_010570.3	NM_010570.3		16367	118130087	NM_010570.3	Irs1	NP_034700.2	ILMN_1248206	006620537	S	5454	ACTGGGGTGTTTTCAAGTGTCGGCTTAGAATTGGAAGTTGAATGGAAGCG	1	-	82233316-82233365	1qC5	Mus musculus insulin receptor substrate 1 (Irs1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IGI]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IGI]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]	IRS-1; G972R	IRS-1; G972R
Mus musculus	RefSeq	ILMN_200256	ILMN_200256	LOC386079	XM_359059.1	XM_359059.1			38081123	XM_359059.1	LOC386079		ILMN_2538125	003180451	S	1218	GGGCATCCATGACTCCAACTGGATATGTAGCAAGGTATTGTCTTACCTGG										
Mus musculus	RefSeq	ILMN_195004	ILMN_195004	TLX1	NM_021901.2	NM_021901.2		21908	31543873	NM_021901.2	Tlx1	NP_068701.1	ILMN_2511684	003060403	S	1978	TAAAGTGCTTGTGTAATTTATGTGGAAAAATAATAAAAGCCTCTGGATCA	19	+	45231381-45231430	19qC3	Mus musculus T-cell leukemia, homeobox 1 (Tlx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence TAS]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ [goid 48645] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Hox11; Hox-11	Hox11; Hox-11
Mus musculus	RefSeq	ILMN_216007	ILMN_216007	CHRNB3	NM_173212.3	NM_173212.3		108043	146198838	NM_173212.3	Chrnb3	NP_775304.1	ILMN_2689381	000780014	S	3916	GTTCTTTAGATCGCCTTGCACAGACTACACGGCTCTCCCACCTCGCTGCC				8qA2	Mus musculus cholinergic receptor, nicotinic, beta polypeptide 3 (Chrnb3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IEA]	5730417K16Rik; Acrb3	5730417K16Rik; Acrb3
Mus musculus	RefSeq	ILMN_216007	ILMN_216007	CHRNB3	NM_173212.3	NM_173212.3		108043	146198838	NM_173212.3	Chrnb3	NP_775304.1	ILMN_1227122	005670719	S	4151	GGTGAGCATTCGTGACCTTTGAAGTTCTCCTCAGTCCTGTACTCTATCTT				8qA2	Mus musculus cholinergic receptor, nicotinic, beta polypeptide 3 (Chrnb3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IEA]	5730417K16Rik; Acrb3	5730417K16Rik; Acrb3
Mus musculus	RefSeq	ILMN_209845	ILMN_209845	MAP2K6	NM_011943.2	NM_011943.2		26399	141802082	NM_011943.2	Map2k6	NP_036073.1	ILMN_2623856	003400474	S	1108	CCCTCTCCTCAGCTCCCAGCAGACAAGTTCTCCGCGGACTTTGTTGACTT	11	+	110360775-110360824	11qE2	Mus musculus mitogen-activated protein kinase kinase 6 (Map2k6), mRNA.		Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IPI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MEK6; Prkmk6; MKK6; SAPKK3	MEK6; Prkmk6; MKK6; SAPKK3
Mus musculus	RefSeq	ILMN_209845	ILMN_209845	MAP2K6	NM_011943.2	NM_011943.2		26399	141802082	NM_011943.2	Map2k6	NP_036073.1	ILMN_2599748	001240300	S	125	CACCTTGACTCCCTGAAAGTCCATCTGCTGCATCGGTCAAGAGAAACTCC	11	+	110260560-110260609	11qE2	Mus musculus mitogen-activated protein kinase kinase 6 (Map2k6), mRNA.		Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IPI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MEK6; Prkmk6; MKK6; SAPKK3	MEK6; Prkmk6; MKK6; SAPKK3
Mus musculus	MEEBO	ILMN_224261	ILMN_224261	NPEPL1	scl0228961.11_14				47523980	NM_213733	Npepl1		ILMN_2777512	000770215	S	1724	CTCTTAAGATGAGTTTGGCTTCTCCTTCCGTGCCCAGTGGTGACAGGAGT						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	Riken	ILMN_207105	ILMN_207105	RCN2	ri|5730565H15|PX00645G19|AK077734|1008					AK077734	Rcn2		ILMN_1225801	003840097	S	652	TGGCCCTAAGAGAATAAGTTTGCCAGTCATACCTTGAGACAGACTCTTCC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222582	ILMN_222582	AOX4	NM_023631.2	NM_023631.2		71872	114205421	NM_023631.2	Aox4	NP_076120.2	ILMN_2751837	005130692	S	4237	GCCCCAAACCAGAGCAGCATATGGGTTGACGAGAATTTATCAAACATGAT	1	+	58324705-58324754	1qC1.3	Mus musculus aldehyde oxidase 4 (Aox4), mRNA.			Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence ISA]; Interacting selectively with molybdenum (Mo) ions [goid 30151] [evidence ISA]; Catalysis of the reaction: an aldehyde + H2O + O2 = a carboxylic acid + H2O2 [goid 4031] [evidence ISA]	MGC144190; Aoh2; 2310003G12Rik; MGC144189	MGC144190; Aoh2; 2310003G12Rik; MGC144189
Mus musculus	RefSeq	ILMN_190184	ILMN_251712	5730601F06RIK	XM_920572.2	XM_920572.2		77519	94385593	XM_920572.2	5730601F06Rik	XP_925665.1	ILMN_1222946	003190730	S	2757	CTCGGACCCCATTGGTTCTGATGAGCATACCAAGAAGTAGTTCCTACCTG				9qA3	PREDICTED: Mus musculus RIKEN cDNA 5730601F06 gene, transcript variant 6 (5730601F06Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190184	ILMN_251712	5730601F06RIK	XM_920572.2	XM_920572.2		77519	94385593	XM_920572.2	5730601F06Rik	XP_925665.1	ILMN_1223473	005130608	S	3807	CAGCCCTAAACCTTTATCCAAAAGTGGTAAGCTAATGAGAAGTACAGCGA				9qA3	PREDICTED: Mus musculus RIKEN cDNA 5730601F06 gene, transcript variant 6 (5730601F06Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190184	ILMN_251712	5730601F06RIK	XM_920572.2	XM_920572.2		77519	94385593	XM_920572.2	5730601F06Rik	XP_925665.1	ILMN_2610683	004760228	S	1266	ATCCTACAGGCCTTGCTATGCATCTTCCAATTCTCAATGCAAGAAACCCC				9qA3	PREDICTED: Mus musculus RIKEN cDNA 5730601F06 gene, transcript variant 6 (5730601F06Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_224099	ILMN_224099	NGEF	scl16508.16.1_213				9845276	NM_019867	Ngef		ILMN_1245037	006330072	S	2605	CTGGCCCCTGATGGAGCCCAGGCGTTTTGCAGAATGAATTGGTCACTGCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220608	ILMN_220608	ACIN1	NM_023190.1	NM_023190.1		56215	12963562	NM_023190.1	Acin1	NP_075679.1	ILMN_2724347	004260209	S	4390	CTGTTAAGTCTGAGAGGGAAGAGCTAGGCTATGAAGGGAAGATGTGGCCG	14	-	55261293-55261342	14qC3	Mus musculus apoptotic chromatin condensation inducer 1 (Acin1), transcript variant 2, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence ISS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2610036I19Rik; acinusL; 2610510L13Rik; mKIAA0670; acinusS; ACN; C79325; Acinus	2610036I19Rik; acinusL; 2610510L13Rik; mKIAA0670; acinusS; ACN; C79325; Acinus
Mus musculus	RefSeq	ILMN_231720	ILMN_231720	CHST4	NM_011998.3	NM_011998.3		26887	31982527	NM_011998.3	Chst4	NP_036128.2	ILMN_2789974	006560193	S	1861	GCCAAGGAAATGCGGCTCTTACCAAAGAGCTCCCAGAAACTTCCACAGGG	8	-	112553288-112553337	8qD3	Mus musculus carbohydrate (chondroitin 6/keratan) sulfotransferase 4 (Chst4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]	GST-3	GST-3
Mus musculus	RefSeq	ILMN_215826	ILMN_215826	D4ERTD22E	NM_174996.2	NM_174996.2		213491	71043938	NM_174996.2	D4Ertd22e	NP_778161.1	ILMN_1216950	004920564	S	777	GGCCACTTGGGGTAAAGCCAGTGCCAGCAATAACAGTTTATCATGCTCAT	4	-	140671313-140671362	4qD3	Mus musculus DNA segment, Chr 4, ERATO Doi 22, expressed (D4Ertd22e), transcript variant 2, mRNA.				1110022I03; RP23-183L1.10	1110022I03; RP23-183L1.10
Mus musculus	RefSeq	ILMN_243443	ILMN_243443	DPPA4	NM_028610.2	NM_028610.2		73693	63079712	NM_028610.2	Dppa4	NP_082886.2	ILMN_3076469	005690398	I	372	CGAGTGAGCAGCAAAGGCCAGAAATTAGATGCTTATAAACGACTCCTTGC	16	+	48289298-48289318:48289441-48289469	16qB5	Mus musculus developmental pluripotency associated 4 (Dppa4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2410091M23Rik; C76608	2410091M23Rik; C76608
Mus musculus	RefSeq	ILMN_243443	ILMN_243443	DPPA4	NM_028610.2	NM_028610.2		73693	63079712	NM_028610.2	Dppa4	NP_082886.2	ILMN_3155408	004900753	A	1133	TGCTTAAGTTCACGCAGTTTGAAAAAAGCCAGCGAGGCCACCTCTGCTCG	16	+	48294004-48294053	16qB5	Mus musculus developmental pluripotency associated 4 (Dppa4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2410091M23Rik; C76608	2410091M23Rik; C76608
Mus musculus	RefSeq	ILMN_195610	ILMN_243443	DPPA4	NM_028610.2	NM_028610.2		73693	63079712	NM_028610.2	Dppa4	NP_082886.2	ILMN_2593476	005720326	S	1356	TGTAAAGACTTGGCTTATACCTGTAGCCTCCGCATGCATGTCCTCTTCCC	16	+	48294227-48294276	16qB5	Mus musculus developmental pluripotency associated 4 (Dppa4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2410091M23Rik; C76608	2410091M23Rik; C76608
Mus musculus	RefSeq	ILMN_212853	ILMN_212853	OLFR167	NM_146935.1	NM_146935.1		258937	22129036	NM_146935.1	Olfr167	NP_667146.1	ILMN_1221872	001410452	S	749	ACTACGCACCATTTGCTTACACCTATCTACGCCCAAGATCCCTCCGATCC	16	-	19514929-19514978	16qA3	Mus musculus olfactory receptor 167 (Olfr167), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR272-1	MOR272-1
Mus musculus	MEEBO	ILMN_220979	ILMN_220979	1700022F17RIK	scl42577.3_193				51828962	XM_484127	1700022F17Rik		ILMN_2729404	000840010	S	839	ACAACCACCTGAGCAATGAGAATCTCTTAAATAGTCATCTTTGGGACCAC										
Mus musculus	RefSeq	ILMN_210572	ILMN_323409	A130030D18RIK	XM_001477635.1	XM_001477635.1		228116	149249475	XM_001477635.1	A130030D18Rik	XP_001477685.1	ILMN_1245432	003890605	S	347	GCCAAAATTGCACATCGTATATTAGAAATTATGTCTGCTGATACTTCTCC				2qD	PREDICTED: Mus musculus RIKEN cDNA A130030D18 gene (A130030D18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209159	ILMN_209159	CTSD	NM_009983.2	NM_009983.2		13033	21450788	NM_009983.2	Ctsd	NP_034113.1	ILMN_2987685	000840070	S	1745	GGTGAGCAGGAAGGAGCAAGAGGACAGAAGCAAAACTATGAACCTGGGGG	7	-	149561980-149562029	7qF5	Mus musculus cathepsin D (Ctsd), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IC ]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	CD; CatD	CD; CatD
Mus musculus	RefSeq	ILMN_212075	ILMN_212075	MS4A7	NM_027836.5	NM_027836.5		109225	118130396	NM_027836.5	Ms4a7	NP_082112.3	ILMN_3019158	001240553	I	383	CCATTGCTGGAATTCTCTCCATTATCTCTGAAAAAATCTCAACCAAACCC	19	-	11400299-11400348	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 7 (Ms4a7), transcript variant 1, mRNA.				CFFMA; 9130422I10Rik; A430103C15Rik; CD20l4	CFFMA; 9130422I10Rik; A430103C15Rik; CD20l4
Mus musculus	RefSeq	ILMN_212075	ILMN_212075	MS4A7	NM_027836.5	NM_027836.5		109225	118130396	NM_027836.5	Ms4a7	NP_082112.3	ILMN_3091003	001660528	A	712	TGGTGGAAGCAAGTCTACTCCAACAAACCTGGGGGTACATTTTTCTTGCC	19	-	11396055-11396072:11396789-11396820	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 7 (Ms4a7), transcript variant 1, mRNA.				CFFMA; 9130422I10Rik; A430103C15Rik; CD20l4	CFFMA; 9130422I10Rik; A430103C15Rik; CD20l4
Mus musculus	RefSeq	ILMN_239002	ILMN_239002	YTHDF2	NM_145393.2	NM_145393.2		213541	30841027	NM_145393.2	Ythdf2	NP_663368.2	ILMN_2868374	004280551	S	2620	CAGTGTTACCCAAGGTTGTGTCTGTAAGGGTGGCTCATTTTCTCTGACCC	4	-	131458400-131458449	4qD2.3	Mus musculus YTH domain family 2 (Ythdf2), mRNA.				HGRG8; NY-REN-2; 9430020E02Rik	HGRG8; NY-REN-2; 9430020E02Rik
Mus musculus	RefSeq	ILMN_200321	ILMN_200321	LOC386230	XM_359126.1	XM_359126.1			38081308	XM_359126.1	LOC386230		ILMN_1224141	001050630	S	1620	CAATCTGCAGATGACCCTCCCTGACACCAAAACATGGCAAGTGTTGGAGC										
Mus musculus	RefSeq	ILMN_202678	ILMN_245874	E130116L18RIK	XM_982295.1	XM_982295.1		77870	94374297	XM_982295.1	E130116L18Rik	XP_987389.1	ILMN_1249658	002970719	S	1104	CTGCTGTCATCCTGATGTTCTGCTCAAATGCGATGGCCAAGCAACCATGC				5qA3	PREDICTED: Mus musculus RIKEN cDNA E130116L18 gene (E130116L18Rik), mRNA.					
Mus musculus	Riken	ILMN_206243	ILMN_206243	C130047K18RIK	ri|C130047K18|PX00170C14|AK081583|2168					AK081583	C130047K18Rik		ILMN_1219792	006760095	S	1911	TCATCAGCCTTGGTGACAGGCTTGGTGGGGAGGGGGGCTCAAAGAATGCT										
Mus musculus	MEEBO	ILMN_188289	ILMN_188289	1190009E20RIK	scl26474.1.1_266						1190009E20Rik		ILMN_1259596	000620037	S	2	CCCCCTCGTTTGCTGTACCTGGTCAAGGCATTTGCTGGCACCATCGTGGT										
Mus musculus	RefSeq	ILMN_211704	ILMN_211704	PAPD1	NM_026157.2	NM_026157.2		67440	117676375	NM_026157.2	Papd1	NP_080433.1	ILMN_2748708	000990575	S	1782	GGCATGATGCAGCCTTTTGAACTTCTGGGAAGAACTGCCACTAAATGTTC	18	+	4396459-4396465:4396466-4396508	18qA1	Mus musculus PAP associated domain containing 1 (Papd1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group [goid 4652] [evidence IEA]	AW551379; 0610027A18Rik	AW551379; 0610027A18Rik
Mus musculus	RefSeq	ILMN_211704	ILMN_211704	PAPD1	NM_026157.2	NM_026157.2		67440	117676375	NM_026157.2	Papd1	NP_080433.1	ILMN_2965526	002360475	S	2433	TCTAGCCTCCCGGGTCAGAGCTACTTCAAGCGAAGTTCCCCGTTGCCAGT	18	+	4397110-4397159	18qA1	Mus musculus PAP associated domain containing 1 (Papd1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group [goid 4652] [evidence IEA]	AW551379; 0610027A18Rik	AW551379; 0610027A18Rik
Mus musculus	RefSeq	ILMN_222080	ILMN_310841	LOC100041466	XM_001473201.1	XM_001473201.1		100041466	149275196	XM_001473201.1	LOC100041466	XP_001473251.1	ILMN_2744336	001500131	S	54	TACTATGGCTGCTGTGTCTGTTGATCCCCAGAGGCCACTCCCAGTCCTCC	Un|NT_166433.1	+	28654-28657:28658-28703		PREDICTED: Mus musculus similar to T-cell leukemia protein Tcl1b5 (LOC100041466), mRNA.					
Mus musculus	RefSeq	ILMN_219582	ILMN_233997	GCKR	NM_144909.1	NM_144909.1		231103	21450292	NM_144909.1	Gckr	NP_659158.1	ILMN_2710811	002120100	S	1551	AGTGATACATTTCCCTCAACCGCTGTCGAATGATGTCCGCGCGGCCCCCA	5	+	31628777-31628826	5qB1	Mus musculus glucokinase regulatory protein (Gckr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IMP]; A cellular homeostatic process involved in the maintenance of an internal equilibrium of glucose within a cell or between a cell and its external environment [goid 1678] [evidence IMP]		MGC19300; GKRP	MGC19300; GKRP
Mus musculus	Riken	ILMN_203928	ILMN_203928	A130032P05RIK	ri|A130032P05|PX00122L05|AK037644|4331					AK037644	A130032P05Rik		ILMN_1228261	006620301	S	2851	AAGGAGACAAGTGTGTTGGGGAGATGAGGACTTCAGGCTGCTAGGTTCTG										
Mus musculus	MEEBO	ILMN_224002	ILMN_224002	GFI1B	scl19493.7.1_183				34328121	NM_008114	Gfi1b		ILMN_2772930	003060292	S	1603	GGTGAGCCACGAGGCTATGAAATCAGCCATGATAGTAGAAGCCTGCTCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	Riken	ILMN_201932	ILMN_201932	8430406N16RIK	ri|8430406N16|PX00024L18|AK018389|1287					AK018389	8430406N16Rik		ILMN_1217167	003060170	S	1043	CAACCTAGATACACAGGTTCCTATTCCTCAAGTGCCTGTGGTAGTTCTGG										
Mus musculus	MEEBO	ILMN_213398	ILMN_213398	PRODH	scl0019125.1_326	NM_011172.1			6755177	NM_011172.1	Prodh		ILMN_2636666	003060400	S	2174	CCCTGCACTGGGCAGAGGACAGACTAGGAAGCCTGTTTAGTCAATAAATC						The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6560] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid [goid 6537] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6562] [evidence IEA]	Catalysis of the reaction: L-proline + acceptor = (S)-1-pyrroline-5-carboxylate + reduced acceptor [goid 4657] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213151	ILMN_213151	PAX3	NM_008781.3	NM_008781.3		18505	142349183	NM_008781.3	Pax3	NP_032807.2	ILMN_2634195	006100707	S	1667	CCAGCTGCAGTCAGAGACTGGAACATATGAAGAATGTGGACAGTCTGCCC	1	-	78099993-78100042	1qC4	Mus musculus paired box gene 3 (Pax3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IGI]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21527] [evidence IGI]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IGI]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]	Sp; Pax-3; splotch	Sp; Pax-3; splotch
Mus musculus	MEEBO	ILMN_196104	ILMN_196104	LIN28	scl24855.1.1_97						Lin28		ILMN_2521653	006220338	S	14	CAACCATCACGCTACAGCAGGGCAGGACACTTGCCACTGAGGCCCATACT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_215082	ILMN_215082	CARS	NM_013742.4	NM_013742.4		27267	148747197	NM_013742.4	Cars	NP_038770.3	ILMN_2690423	001340039	S	217	TCAAGGCTCTTCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCT				7qF5	Mus musculus cysteinyl-tRNA synthetase (Cars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6423] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys) [goid 4817] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	CA3	CA3
Mus musculus	RefSeq	ILMN_223230	ILMN_223230	1700021F05RIK	NM_026411.1	NM_026411.1		67851	13385903	NM_026411.1	1700021F05Rik	NP_080687.1	ILMN_2761181	001850762	S	703	TGAAGAGAAGACTGAGAACGACAAGCACCGGGTGGTGTTGCGCCGATGGA	10	-	43245072-43245121	10qB2	Mus musculus RIKEN cDNA 1700021F05 gene (1700021F05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_227836	ILMN_227836	NLRP1A	NM_001004142.1	NM_001004142.1		195046	51921280	NM_001004142.1	Nlrp1a	NP_001004142.1	ILMN_3160230	005860519	S	3845	ATCCTCACCTGGTCATGGATATACTTGAGAAGTTGGGTGGGGTCTCTGTG	11	-	70905746-70905795	11qB4	Mus musculus NLR family, pyrin domain containing 1A (Nlrp1a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Gm15; NAC; CARD7; Nalp1a; Gm14; Nalp1; PP1044; Nlrp1; DEFCAP	Gm15; NAC; CARD7; Nalp1a; Gm14; Nalp1; PP1044; Nlrp1; DEFCAP
Mus musculus	RefSeq	ILMN_218718	ILMN_218718	DDX59	NM_178052.3	NM_178052.3		67997	142349852	NM_178052.3	Ddx59	NP_835153.1	ILMN_2699356	001940400	S	1209	GCAGGCAAAACCCTGCTTACCAGATGGATGAGCCGTAGCTTATGTCAGCT	1	+	138314260-138314309	1qE4	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (Ddx59), transcript variant 2, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	4833411G06Rik; 1210002B07Rik	4833411G06Rik; 1210002B07Rik
Mus musculus	RefSeq	ILMN_185657	ILMN_185657	VPREB2	NM_016983.1	NM_016983.1		22363	8850239	NM_016983.1	Vpreb2	NP_058679.1	ILMN_2428897	006330224	S	19	CTCCGGAGCCACGAAAAGAAGAGAATGGAGAGAGAGTGGGAAGGAGAAAA	16	+	17980644-17980671:17980658-17980679	16qA3	Mus musculus pre-B lymphocyte gene 2 (Vpreb2), mRNA.		The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IGI]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IGI]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IGI]		CD179b; VpreB1; Vpreb-2	CD179b; VpreB1; Vpreb-2
Mus musculus	MEEBO	ILMN_186130	ILMN_186130	AA536749	scl41494.26_320				27819595	NM_012027	AA536749		ILMN_2432857	002900286	S	13	GGGGAACATTGCTGGGGTTTAATCTGTCTGAAAAGAAGCTGCCATGCTGC										
Mus musculus	MEEBO	ILMN_186130	ILMN_186130	AA536749	scl41494.26_320				27819595	NM_012027	AA536749		ILMN_1219077	005050192	S	3574	TTCTCAGATTAGTCACGCGCAAGCAGTAGAGTGGGACGGTTTCCCCGCTG										
Mus musculus	RefSeq	ILMN_200479	ILMN_200479	LOC383251	XM_356945.1	XM_356945.1			38082569	XM_356945.1	LOC383251		ILMN_1257134	006060373	S	670	AGCCCCAACCCCAGAGGATGCACGTTTCAGGTAAAAGAACCAGCTCTGCC										
Mus musculus	RefSeq	ILMN_209407	ILMN_209407	4833413D08RIK	NM_175167.3	NM_175167.3		71425	31982542	NM_175167.3	4833413D08Rik	NP_780376.2	ILMN_1231931	004560035	S	1839	ACCCCAAGTACTGAATGACAGCAAACCCCTGAGAATTGTCTCCATGCCCC	2	+	154096780-154096829	2qH1	Mus musculus RIKEN cDNA 4833413D08 gene (4833413D08Rik), mRNA.				MGC91146; AI413838; MGC102620	MGC91146; AI413838; MGC102620
Mus musculus	RefSeq	ILMN_209407	ILMN_209407	4833413D08RIK	NM_175167.3	NM_175167.3		71425	31982542	NM_175167.3	4833413D08Rik	NP_780376.2	ILMN_3035931	001740291	I	1740	GAACATTCCTGTAGGTGTGTCTTCACATACTTTAAAGAACTCCGATGTCA	2	+	154095970-154096019	2qH1	Mus musculus RIKEN cDNA 4833413D08 gene (4833413D08Rik), mRNA.				MGC91146; AI413838; MGC102620	MGC91146; AI413838; MGC102620
Mus musculus	RefSeq	ILMN_209407	ILMN_209407	4833413D08RIK	NM_175167.3	NM_175167.3		71425	31982542	NM_175167.3	4833413D08Rik	NP_780376.2	ILMN_3109663	004890398	A	727	GCCATTCAGGAGAAAGTGAATGAAGTGGTCCCAGATGGCGTCAAGGAGCC	2	+	154088050-154088099	2qH1	Mus musculus RIKEN cDNA 4833413D08 gene (4833413D08Rik), mRNA.				MGC91146; AI413838; MGC102620	MGC91146; AI413838; MGC102620
Mus musculus	RefSeq	ILMN_209407	ILMN_209407	4833413D08RIK	NM_175167.3	NM_175167.3		71425	31982542	NM_175167.3	4833413D08Rik	NP_780376.2	ILMN_2754614	006370301	S	1850	CTGAATGACAGCAAACCCCTGAGAATTGTCTCCATGCCCCTTTCAGCCCA	2	+	154096791-154096840	2qH1	Mus musculus RIKEN cDNA 4833413D08 gene (4833413D08Rik), mRNA.				MGC91146; AI413838; MGC102620	MGC91146; AI413838; MGC102620
Mus musculus	RefSeq	ILMN_215013	ILMN_215013	FUT8	NM_016893.4	NM_016893.4		53618	146134475	NM_016893.4	Fut8	NP_058589.2	ILMN_2749471	006980221	S	2213	ATTCCAATGGAACCTGGAGATATCATTGGTGTGGCTGGAAACCATTGGGA				12qC3	Mus musculus fucosyltransferase 8 (Fut8), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The chemical reactions and pathways involving a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43112] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IMP]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence ISA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha(1,6)-linkage [goid 46921] [evidence IMP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: GDP-L-fucose + N4-{N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,3)-[N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,6)]-beta-D-mannosyl-(1,4)-N-acetyl-beta-D-glucosaminyl-(1,4)-N-acetyl-beta-D-glucosaminyl}asparagine = GDP + N4-{N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,3)-[N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,6)]-beta-D-mannosyl-(1,4)-N-acetyl-beta-D-glucosaminyl-(1,4)-[alpha-L-fucosyl-(1,6)]-N-acetyl-beta-D-glucosaminyl}asparagine [goid 8424] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215013	ILMN_215013	FUT8	NM_016893.4	NM_016893.4		53618	146134475	NM_016893.4	Fut8	NP_058589.2	ILMN_1234126	007100398	S	245	GGCTGAGGCCATCTATGGCCCTGGTAGTGTTTTCATTCAAGACAAAGTCC				12qC3	Mus musculus fucosyltransferase 8 (Fut8), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The chemical reactions and pathways involving a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43112] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IMP]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence ISA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha(1,6)-linkage [goid 46921] [evidence IMP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: GDP-L-fucose + N4-{N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,3)-[N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,6)]-beta-D-mannosyl-(1,4)-N-acetyl-beta-D-glucosaminyl-(1,4)-N-acetyl-beta-D-glucosaminyl}asparagine = GDP + N4-{N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,3)-[N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,6)]-beta-D-mannosyl-(1,4)-N-acetyl-beta-D-glucosaminyl-(1,4)-[alpha-L-fucosyl-(1,6)]-N-acetyl-beta-D-glucosaminyl}asparagine [goid 8424] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211732	ILMN_211732	9130005N14RIK	NM_026667.2	NM_026667.2		68303	31560127	NM_026667.2	9130005N14Rik	NP_080943.2	ILMN_2618982	006860192	S	1903	ATCAATAATTATGTTTTCTTTACATTAACTTAAACTTGTACTTGTTCTAT	5	+	65432131-65432180	5qC3.1	Mus musculus RIKEN cDNA 9130005N14 gene (9130005N14Rik), mRNA.				1190001N04Rik; Noxp20; MGC117924	1190001N04Rik; Noxp20; MGC117924
Mus musculus	RefSeq	ILMN_211732	ILMN_211732	9130005N14RIK	NM_026667.2	NM_026667.2		68303	31560127	NM_026667.2	9130005N14Rik	NP_080943.2	ILMN_1217235	000450397	S	2802	TTGTGTGACTGTGTTTTGTTTTTTCAGCTGTATGTCTCCTGAAACAACCA	5	+	65433030-65433079	5qC3.1	Mus musculus RIKEN cDNA 9130005N14 gene (9130005N14Rik), mRNA.				1190001N04Rik; Noxp20; MGC117924	1190001N04Rik; Noxp20; MGC117924
Mus musculus	RefSeq	ILMN_210682	ILMN_210682	FCRL1	NM_178165.3	NM_178165.3		229499	141802130	NM_178165.3	Fcrl1	NP_835459.1	ILMN_2721910	003780241	S	1591	GGCTAAACCCTCTTGGGTTTATAATAGTCTTTGAAAGGTTCACCAAGTTC	3	+	87195725-87195774	3qF1	Mus musculus Fc receptor-like 1 (Fcrl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	A230020G22Rik; mIFGP1; FcRH1S; Fcrh1; mBXMH1b; moFcRH1S; FcRH1L; IFGP1; moFcRH1L; BXMAS1; moFcRH1; BXMAS1-like; mBXMH1	A230020G22Rik; mIFGP1; FcRH1S; Fcrh1; mBXMH1b; moFcRH1S; FcRH1L; IFGP1; moFcRH1L; BXMAS1; moFcRH1; BXMAS1-like; mBXMH1
Mus musculus	MEEBO	ILMN_219550	ILMN_219550	2210003I03RIK	scl32967.5.1_166	XM_133245.1			20822217	XM_133245.1	2210003I03Rik		ILMN_2710359	007100356	S	959	CCGCTGGCCCCACCTCCTGGAAGGCCCATCTATCCAGTGCATTGAACGAG										
Mus musculus	Riken	ILMN_206042	ILMN_206042	D130011J22RIK	ri|D130011J22|PX00182C15|AK051175|3394					AK051175	D130011J22Rik		ILMN_1248228	004050050	S	3027	GAACACATGCTACAGGAGGAGTCTATGATCAACCCCACTGCTTCCACCGC										
Mus musculus	RefSeq	ILMN_213544	ILMN_213544	NUCB2	NM_016773.1	NM_016773.1		53322	7949093	NM_016773.1	Nucb2	NP_058053.1	ILMN_2638121	006510706	S	1562	CTGCCAGAACTTGGAAGAAAACCGTTGATTCAACATCTATTTCATCTTTC	7	+	123683975-123684024	7qF1	Mus musculus nucleobindin 2 (Nucb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence IDA]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	AI607786; Nefa	AI607786; Nefa
Mus musculus	MEEBO	ILMN_186180	ILMN_186180	GREB1	scl42604.11_253				7656872	NM_015764	Greb1		ILMN_2433318	004290528	S	11	GCACCGCGGGTGGTAGTAGTTCAAGGAGAAACCTGTCCAAGTTGATGCCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222149	ILMN_222149	MYO1C	NM_008659.3	NM_008659.3		17913	124494245	NM_008659.3	Myo1c	NP_032685.1	ILMN_2745367	005870121	S	4954	TCTGGGGATAAAGAATCCAGTCCAAAGTGGCTGGAGCGGTAAAGGCCACT	11	+	75487818-75487867	11qB5	Mus musculus myosin IC (Myo1c), transcript variant 3, mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; A myosin complex containing a class I myosin heavy chain and associated light chains; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments; myosin I complexes are involved in diverse processes related to membrane traffic and cell movement [goid 45160] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence NAS]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence TAS]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	NMI; myr2; C80397; MMIb; MYO1E; mm1beta	NMI; myr2; C80397; MMIb; MYO1E; mm1beta
Mus musculus	MEEBO	ILMN_214836	ILMN_214836	HSD11B1	scl000857.1_11	NM_008288.1			6680278	NM_008288.1	Hsd11b1		ILMN_2774160	004570196	S	1005	AGGAACTCCTGAGCCCTGGTGAGTGGTCTTAGAACAGTCCTGCCTGATAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+ [goid 3845] [evidence IDA]; Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+ [goid 3845] [evidence IMP]		
Mus musculus	MEEBO	ILMN_214836	ILMN_214836	HSD11B1	scl000857.1_11	NM_008288.1			6680278	NM_008288.1	Hsd11b1		ILMN_1214998	002340301	S	998	GTAACTAGGAACTCCTGAGCCCTGGTGAGTGGTCTTAGAACAGTCCTGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+ [goid 3845] [evidence IDA]; Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+ [goid 3845] [evidence IMP]		
Mus musculus	RefSeq	ILMN_198623	ILMN_198623	LOC224894	XM_128742.4	XM_128742.4			38086514	XM_128742.4	LOC224894		ILMN_1234528	006650129	S	259	GTCAAGAGGATCAATGTGCAGATTGAGCACAAGAAGCACACTTTGTGAGG										
Mus musculus	RefSeq	ILMN_209019	ILMN_209019	YIPF5	NM_023311.3	NM_023311.3		67180	70980520	NM_023311.3	Yipf5	NP_075800.1	ILMN_2591791	007160402	S	1560	ATGAACAACTGTTTAGACATTAAATGTGTCAACTCAATGTGGACTGGCCA	18	-	40365238-40365287	18qB3	Mus musculus Yip1 domain family, member 5 (Yipf5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The continuous network of membranes encompassing the outer nuclear membrane and the endoplasmic reticulum [goid 42175] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Yip1a; 2610311I19Rik; AA408236	Yip1a; 2610311I19Rik; AA408236
Mus musculus	RefSeq	ILMN_197288	ILMN_197288	LOC218411	XM_138775.2	XM_138775.2			38074987	XM_138775.2	LOC218411		ILMN_1221551	003930762	S	407	CTGGAACTGTCCGGCCCTTTTTAGTCGGGGGCCTTCCTGTTAATTTACTG										
Mus musculus	RefSeq	ILMN_214281	ILMN_214281	4930412F15RIK	NM_175517.3	NM_175517.3		242408	142364998	NM_175517.3	4930412F15Rik	NP_780726.1	ILMN_2646313	003780349	S	1712	CTGGCACAGGACTTACTGAGCCTGGGCAAGATCAGCAATAAAGTGGAAAC	4	-	43672495-43672526:43672527-43672544	4qB1	Mus musculus RIKEN cDNA 4930412F15 gene (4930412F15Rik), mRNA.				RP23-191F22.10	RP23-191F22.10
Mus musculus	RefSeq	ILMN_198240	ILMN_243790	LYCAT	NM_001081071.1	NM_001081071.1		225010	124486721	NM_001081071.1	Lycat	NP_001074540.1	ILMN_1218583	007330356	S	2408	CTCCCATCTGTGTCATGTGATTGGGGCAGGGACAGAGGCACATAGAAGCT	17	+	73590649-73590698	17qE2	Mus musculus lysocardiolipin acyltransferase (Lycat), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IDA]	ALCAT1; Gm91; AI181996	ALCAT1; Gm91; AI181996
Mus musculus	RefSeq	ILMN_196473	ILMN_196473	ADAM22	XM_131876.3	XM_131876.3			38082031	XM_131876.3	Adam22		ILMN_1233186	005910259	S	2409	GTGCAAGCTTGATTCAGCCTTCAGCAATAGCCACGTAGGGAACAAGAGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199960	ILMN_199960	LOC385669	XM_358894.1	XM_358894.1			38079221	XM_358894.1	LOC385669		ILMN_1214893	007380209	S	221	CTGGGATGATCGACCAGCTCTGTATCCTTCAGAAATGTGCATGTGCTAAC										
Mus musculus	RefSeq	ILMN_257003	ILMN_257003	TTC7	NM_028639.1	NM_028639.1		225049	30842799	NM_028639.1	Ttc7	NP_082915.1	ILMN_2946689	003780181	S	4295	GGCCACAGCCACAGGCCAAAGGGAGGCTATTCAGTCCTTGGTTGAAGGGT	17	+	87289776-87289825	17qE4	Mus musculus tetratricopeptide repeat domain 7 (Ttc7), mRNA.		The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	fsn; 1700007L07Rik; hea; 1110035E02Rik	fsn; 1700007L07Rik; hea; 1110035E02Rik
Mus musculus	RefSeq	ILMN_206612	ILMN_236612	EG622282	XM_916787.2	XM_916787.2		622282	94366715	XM_916787.2	EG622282	XP_921880.1	ILMN_2581370	006100259	S	808	AAAAGCGGAGGCGATGGCGCGCAGTTAAAAGTGTGGTAAAGCGCAGGGCG				2qE2	PREDICTED: Mus musculus predicted gene, EG622282 (EG622282), mRNA.					
Mus musculus	RefSeq	ILMN_221441	ILMN_221441	ZPLD1	NM_178720.4	NM_178720.4		239852	142382265	NM_178720.4	Zpld1	NP_848835.1	ILMN_2735680	003850435	S	2395	GAGGTAGGGAAATGAATGATCCAAAGGGGCTTTCTTTATAAGCCATCACT	16	-	55225432-55225481	16qC1.1	Mus musculus zona pellucida like domain containing 1 (Zpld1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9430016A21Rik	9430016A21Rik
Mus musculus	RefSeq	ILMN_239340	ILMN_239340	PLOD2	NM_011961.1	NM_011961.1		26432	6755107	NM_011961.1	Plod2	NP_036091.1	ILMN_2819929	003890465	S	2854	CCCTGTGTTCCTCCAGGGCAAGTCTCAGGGGAAGCTCATGTCTTTCTGCT	9	+	92411633-92411682	9qE3.3	Mus musculus procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 (Plod2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2 [goid 8475] [evidence IEA]	LH2; D530025C14Rik; Plod-2	LH2; D530025C14Rik; Plod-2
Mus musculus	RefSeq	ILMN_219650	ILMN_219650	PTGER2	NM_008964.2	NM_008964.2		19217	31560647	NM_008964.2	Ptger2	NP_032990.1	ILMN_2812759	001240543	S	2546	TAACTCCCCAAGGACAGTTTGCAGTTAATGTAGACATGGCATCTTTTAGG	14	+	43924955-43925004	14qC1	Mus musculus prostaglandin E receptor 2 (subtype EP2) (Ptger2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a thromboxane (TXA) to initiate a change in cell activity [goid 4960] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]	EP2; Ptgerep2	EP2; Ptgerep2
Mus musculus	MEEBO	ILMN_184575	ILMN_184575	PPM1L	scl23092.5_223				30520152	NM_178726	Ppm1l		ILMN_2419777	000020615	S	7	GCTGGGCTATTCTTGGCTGGGCTACCACAGCCTTCAGTTGTTTCTCTGCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IPI]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	Riken	ILMN_205197	ILMN_205197	4933406L09RIK	ri|D030019F13|PX00179H12|AK050783|2208					AK050783	4933406L09Rik		ILMN_2570733	006980619	S	1253	GGAGCTGTTCAAGGCTGCTGCTCTGTTTCCAAGGCAGTGTCAGCACTGAG										
Mus musculus	MEEBO	ILMN_185459	ILMN_185459	PCX	scl000483.1_20				6679236	NM_008797	Pcx		ILMN_2427206	007650113	S	12	GGGCCAATGACCTCGGGTGGAGCAGTTACTGCCTGTGGATCCTCTATCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate + HCO3- = ADP + phosphate + oxaloacetate [goid 4736] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194758	ILMN_242706	FOXO1	NM_019739.2	NM_019739.2		56458	34328254	NM_019739.2	Foxo1	NP_062713.2	ILMN_2656498	006580682	S	4601	AGGAGGTGTCTCTCCCTTCAGAAGCTGTCAATTTCAGCAGCAACCCCTGT	3	+	52153117-52153166	3qC	Mus musculus forkhead box O1 (Foxo1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fkhr1; FKHR; AI876417; Afxh; Foxo1a	Fkhr1; FKHR; AI876417; Afxh; Foxo1a
Mus musculus	RefSeq	ILMN_185367	ILMN_185367	V1RC19	NM_134174.2	NM_134174.2		171192	133922604	NM_134174.2	V1rc19	NP_598935.2	ILMN_1257856	000730719	S	289	CTGAGTGTGTTCCAAGCTGTCACAATATGTCCCAGTACTACATTGCTGGC	6	+	56935624-56935673	6qB3	Mus musculus vomeronasal 1 receptor, C19 (V1rc19), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_218614	ILMN_218614	EIF1A	NM_010120.4	NM_010120.4		13664	141802731	NM_010120.4	Eif1a	NP_034250.2	ILMN_2698107	002850487	S	2641	CAGCACTCGCACAAAGATGCTCTGGAGGCTATAGTAGTGTGTCTTGGTCA	18	+	46769641-46769690	18qC	Mus musculus eukaryotic translation initiation factor 1A (Eif1a), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	eIF-1A; C76390; Eftu; Eif4c; Ef1a	eIF-1A; C76390; Eftu; Eif4c; Ef1a
Mus musculus	MEEBO	ILMN_210781	ILMN_210781	1810073H04RIK	scl53212.12.1_83	XM_129159.3			38085327	XM_129159.3	1810073H04Rik		ILMN_2609121	001500075	S	2473	GCTTGTCCATACTCATTTGCTTTCATCTCAGACTCATTTTGCTGATCCCA										
Mus musculus	RefSeq	ILMN_209504	ILMN_209504	EDG7	NM_022983.2	NM_022983.2		65086	31981249	NM_022983.2	Edg7	NP_075359.1	ILMN_3009440	001770070	S	2339	AATAATTTGCGAGGACCTGTTATCCCTTGATGAGGGCCATTATTGCTCTG	3	+	146223469-146223518	3qH2	Mus musculus endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor 7 (Edg7), mRNA.				lpA3	lpA3
Mus musculus	MEEBO	ILMN_213752	ILMN_213752	HDAC2	scl39022.13.1_2	NM_008229.1			6680194	NM_008229.1	Hdac2		ILMN_2640441	003780092	S	1694	TCCCTGTTTGAGGACATTGGCTTCATTTTATACTGTTTTGGCATGGACTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence TAS]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	MEEBO	ILMN_184210	ILMN_184210	NCOA2	scl16983.24_62				6679023	NM_008678	Ncoa2		ILMN_2416763	000540240	S	10	AATAAAGAATCTGTTGTTACTGCATCATTTAATAAATTTTAATGCCTTCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any series of molecular signals generated as a consequence of a steroid hormone binding to its receptor [goid 30518] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IGI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA];  [goid 30375] [evidence IDA];  [goid 30374] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197505	ILMN_197505	LOC328425	XM_286605.2	XM_286605.2			38076341	XM_286605.2	LOC328425		ILMN_1248751	005310176	S	411	AGAGACCAGGACTGCAGGACTACAAGGACACACGCTGGACACAAGGCCGT										
Mus musculus	MEEBO	ILMN_188840	ILMN_188840	6446580_669	6446580_669						6446580_669		ILMN_2456193	001440398	S	20	GCCAGCACTTACTTTGACATTCGCGGCCGCCTCGACAGAGGCCCCAGCTT										
Mus musculus	RefSeq	ILMN_220529	ILMN_220529	ALOX12B	NM_009659.2	NM_009659.2		11686	118130321	NM_009659.2	Alox12b	NP_033789.1	ILMN_1235966	000050196	S	1965	CATCCATGAGGAACCCACCGATGCAGACCAAGGGGCTAACTACTCTGCAG	11	+	68982754-68982803	11qB3	Mus musculus arachidonate 12-lipoxygenase, 12R type (Alox12b), mRNA.		The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,14Z)-(12S)-12-hydroperoxyicosa-5,8,10,14-tetraenoate [goid 4052] [evidence IDA]	Aloxe2; e-LOX2; MGC130560	Aloxe2; e-LOX2; MGC130560
Mus musculus	RefSeq	ILMN_223904	ILMN_242829	HNRNPD	NM_001077267.1	NM_001077267.1		11991	116256515	NM_001077267.1	Hnrnpd	NP_001070735.1	ILMN_2771260	006200066	S	1362	AGAATTTGCTTTCATTGTTTTATTTCTTAATTGCTATGCTTCAGTATCAA	5	-	100390149-100390198	5qE4	Mus musculus heterogeneous nuclear ribonucleoprotein D (Hnrnpd), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	C230004L04; Auf1	C230004L04; Auf1
Mus musculus	Riken	ILMN_206727	ILMN_206727	C230058N13RIK	ri|C230058N13|PX00175M02|AK082518|1055					AK082518	C230058N13Rik		ILMN_1235803	000630682	S	32	TGTGGGAGCTGCATCTCTATAAGTAAACAGTGCGCGCCGCCGAGCCATGG										
Mus musculus	RefSeq	ILMN_194979	ILMN_322256	LOC100048446	XM_001480608.1	XM_001480608.1		100048446	149254508	XM_001480608.1	LOC100048446	XP_001480658.1	ILMN_2511450	002120347	S	2133	GGTGAGAGTGGCTTTATTAAAGCTGTAGTTGCTATGTGCAGATTATGCAG					PREDICTED: Mus musculus similar to RIKEN cDNA A430033K04 gene (LOC100048446), mRNA.					
Mus musculus	RefSeq	ILMN_214586	ILMN_222522	CCDC85B	NM_198616.2	NM_198616.2		240514	148536849	NM_198616.2	Ccdc85b	NP_941018.1	ILMN_2649550	003840253	S	1985	GTAGATCCCCAGGGGTCCTTTGACACCCTTACCCCTTGCAGACCACTTTC				19qA	Mus musculus coiled-coil domain containing 85B (Ccdc85b), mRNA.				MGC67311; AI842788	MGC67311; AI842788
Mus musculus	RefSeq	ILMN_222522	ILMN_222522	CCDC85B	NM_198616.2	NM_198616.2		240514	148536849	NM_198616.2	Ccdc85b	NP_941018.1	ILMN_1220846	000010278	S	803	TGCCTGGATTGCTCCCTGAGCTCGGGGAATGCTGTGGACCTCCAGACCTG				19qA	Mus musculus coiled-coil domain containing 85B (Ccdc85b), mRNA.				MGC67311; AI842788	MGC67311; AI842788
Mus musculus	RefSeq	ILMN_214096	ILMN_255843	PPP2R2A	NM_028032.1	NM_028032.1		71978	110625885	NM_028032.1	Ppp2r2a	NP_082308.1	ILMN_2742778	001070491	S	379	CAGTGGTGTTTTTCTCAGGTGAAAGGAGCAGTAGATGATGACGTAGCAGA	14	-	67689073-67689122	14qD1	Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform (Ppp2r2a), mRNA. XM_923760 XM_923767 XM_994820	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence IMP]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1541; 2410004D02Rik	mKIAA1541; 2410004D02Rik
Mus musculus	RefSeq	ILMN_214096	ILMN_255843	PPP2R2A	NM_028032.1	NM_028032.1		71978	110625885	NM_028032.1	Ppp2r2a	NP_082308.1	ILMN_2644203	003420685	S	3562	CTTTGGGATAGTGGCATTCCTATGGTTTGGCTTTGAGCCACCAAGCAGTC	14	-	67633291-67633340	14qD1	Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform (Ppp2r2a), mRNA. XM_923760 XM_923767 XM_994820	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence IMP]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1541; 2410004D02Rik	mKIAA1541; 2410004D02Rik
Mus musculus	MEEBO	ILMN_187101	ILMN_187101	SUFU	scl53026.13_400				7657630	NM_015752	Sufu		ILMN_2441176	000460612	S	11	CCTGAAGATTGGTGCCCCTATGGGGCAGATCAGAAAACTCCCTCAGCGGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IMP]; The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 42994] [evidence IGI]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_193913	ILMN_193913	TSSC4	NM_020285.1	NM_020285.1		56844	9938003	NM_020285.1	Tssc4	NP_064681.1	ILMN_2501601	000650075	S	16	CAAGGGGCCTGAGCAGAGTGCATGGGAACACTGGCCCGACTAGGGTACTC	7	+	150250250-150250299	7qF5	Mus musculus tumor-suppressing subchromosomal transferable fragment 4 (Tssc4), transcript variant 1, mRNA.				AA241958; ESTM671070	AA241958; ESTM671070
Mus musculus	MEEBO	ILMN_189480	ILMN_189480	B230340J04RIK	scl54832.4_431				31343133	NM_177234	B230340J04Rik		ILMN_2461640	006130139	S	20	GAGTATGCCATGCTTTCAAACATAGACTAACTATGGAAGCAGAGACTGAG										
Mus musculus	RefSeq	ILMN_207455	ILMN_207455	ING4	NM_133345.2	NM_133345.2		28019	142387601	NM_133345.2	Ing4	NP_579923.1	ILMN_2639665	006550288	S	1295	GACCGCAGGTTACTCACATGTAAAAGGAGTTGGGGTAGGTAAATAAAAGC	6	+	124998960-124999009	6qF2	Mus musculus inhibitor of growth family, member 4 (Ing4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D6Wsu147e; D6Xrf92; p29ING4	D6Wsu147e; D6Xrf92; p29ING4
Mus musculus	RefSeq	ILMN_207455	ILMN_207455	ING4	NM_133345.2	NM_133345.2		28019	142387601	NM_133345.2	Ing4	NP_579923.1	ILMN_2652572	006550408	S	1212	GGGCAGTGGCCTAGTTAAGTGGTTACTCCAACCTCTATGGCCCGGGGATT	6	+	124998877-124998926	6qF2	Mus musculus inhibitor of growth family, member 4 (Ing4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D6Wsu147e; D6Xrf92; p29ING4	D6Wsu147e; D6Xrf92; p29ING4
Mus musculus	RefSeq	ILMN_210318	ILMN_210318	CELSR2	NM_017392.3	NM_017392.3		53883	114050894	NM_017392.3	Celsr2	NP_059088.2	ILMN_1243455	006650132	S	8864	TTCCGAAGCAGCAGCGACGAACCGTCCATCTGAGGAGCCTGGGCCTTGCA	3	-	108195395-108195444	3qF3	Mus musculus cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila) (Celsr2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the DNA-dependent transcription of a specific gene or genes [goid 32583] [evidence IDA]; The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the neural plate [goid 21999] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mKIAA0279; Flamingo1; mfmi1; KIAA0279; EGFL2	mKIAA0279; Flamingo1; mfmi1; KIAA0279; EGFL2
Mus musculus	RefSeq	ILMN_228290	ILMN_228290	DOCK1	NM_001033420.2	NM_001033420.2		330662	118131135	NM_001033420.2	Dock1	NP_001028592.1	ILMN_2885196	004290242	S	6195	GCAGTGTGACTCCTGGGGTGGAGTGTCACTTCAGCTGACATCAAGCAGCT	7	+	142364710-142364759	7qF3	Mus musculus dedicator of cytokinesis 1 (Dock1), mRNA. XM_901855 XM_901858 XM_901861 XM_901863 XM_901867 XM_901871 XM_901875 XM_917736 XM_925168 XM_925170 XM_925172 XM_925175 XM_925178 XM_925180 XM_925182 XM_925184 XM_925185 XM_925187 XM_925189	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9130006G06Rik; D630004B07Rik; AI854900	9130006G06Rik; D630004B07Rik; AI854900
Mus musculus	RefSeq	ILMN_209119	ILMN_209119	ADD2	NM_013458.4	NM_013458.4		11519	146134376	NM_013458.4	Add2	NP_038486.2	ILMN_1254225	007210674	S	2296	CCCCCTCGTTCCTGAAGAAAAGCAAGAAGAAGGAGAAGGTGGAATCCTGA				6qD1	Mus musculus adducin 2 (beta) (Add2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2900072M03Rik	2900072M03Rik
Mus musculus	RefSeq	ILMN_216991	ILMN_216991	TSC22D1	NM_207652.1	NM_207652.1		21807	46559425	NM_207652.1	Tsc22d1	NP_997535.1	ILMN_2677878	002750259	S	2795	GCTCCTTCTGGAATGCCTTCTGTCCCAACAAACTTAGTTCCACCACAGAA	14	+	76818422-76818471	14qD3	Mus musculus TSC22 domain family, member 1 (Tsc22d1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	AA589566; TSC; TSC-22; Tgfb1i4; Egr5; AW105905	AA589566; TSC; TSC-22; Tgfb1i4; Egr5; AW105905
Mus musculus	RefSeq	ILMN_210111	ILMN_210111	NOL12	NM_133800.3	NM_133800.3		97961	85838504	NM_133800.3	Nol12	NP_598561.2	ILMN_2650775	001190307	S	318	GCGGCTAGTGACAGCGAAGACAGAGTCGGTGCAGTATGACCACCCCAATC	15	+	78768257-78768306	15qE1	Mus musculus nucleolar protein 12 (Nol12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence ISA]	C78541; Nop25	C78541; Nop25
Mus musculus	RefSeq	ILMN_210455	ILMN_241738	LMOD3	NM_001081157.1	NM_001081157.1		320502	124487222	NM_001081157.1	Lmod3	NP_001074626.1	ILMN_2605790	006770669	S	1936	GTCACCTAGAACAGCAAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGC	6	-	97188778-97188827	6qD3	Mus musculus leiomodin 3 (fetal) (Lmod3), mRNA.				5430424A14Rik; MGC156399	5430424A14Rik; MGC156399
Mus musculus	MEEBO	ILMN_211774	ILMN_211774	DEFB1	scl34009.2.1_30				31982411	NM_007843	Defb1		ILMN_2770539	005390066	S	346	ATTTACATCATATCAAAATAAATTTTATTTCTCTGTTTAGAAGAGCAATT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]			
Mus musculus	RefSeq	ILMN_185004	ILMN_226444	EIF2C2	NM_153178.2	NM_153178.2		239528	33859782	NM_153178.2	Eif2c2	NP_694818.2	ILMN_2609056	002030605	S	2495	ATGACAGCGCTGAAGGAAGCCATACCTCTGGGCAGAGCAACGGGCGAGAT	15	-	72937403-72937446:72937595-72937600	15qD3	Mus musculus eukaryotic translation initiation factor 2C, 2 (Eif2c2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ago2; KIAA4215; mKIAA1567; mKIAA4215	Ago2; KIAA4215; mKIAA1567; mKIAA4215
Mus musculus	RefSeq	ILMN_200894	ILMN_200894	LOC384638	XM_357759.1	XM_357759.1			38086885	XM_357759.1	LOC384638		ILMN_1216031	002630274	S	120	CCATGGCAAACCCAGAAGAATTGAGCACTCGAAGAGTAGAGGCAGCTTCC										
Mus musculus	RefSeq	ILMN_209248	ILMN_314369	5033430I15RIK	XM_001473131.1	XM_001473131.1		76000	149264201	XM_001473131.1	5033430I15Rik	XP_001473181.1	ILMN_2593994	004860709	S	510	GATCCCTTGGTCTCGCTGGAAGCCACTACTATTTATTGACTCTAAGCCGG	13	+	46061658-46061707	13qA5	PREDICTED: Mus musculus RIKEN cDNA 5033430I15 gene (5033430I15Rik), mRNA.					
Mus musculus	Riken	ILMN_206394	ILMN_206394	A830006J06RIK	ri|A830006J06|PX00154G21|AK080586|3056					AK080586	A830006J06Rik		ILMN_1230266	007050692	S	2819	CCTGACCAGGAGCCCCTTATGTCAAAACTAAGCTAATGTGGAGGGCGAGT										
Mus musculus	RefSeq	ILMN_220110	ILMN_220110	PURB	NM_011221.2	NM_011221.2		19291	141802243	NM_011221.2	Purb	NP_035351.1	ILMN_1247990	003890408	S	903	TGAAAGAGATCCAGGAGCGACAGAGGGATAAGCTTTACGAGCGACGCGGC	11	-	6374968-6375017	11qA1	Mus musculus purine rich element binding protein B (Purb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	AA114818; Cager-2; D11Bwg0414e; 2310015K15Rik	AA114818; Cager-2; D11Bwg0414e; 2310015K15Rik
Mus musculus	RefSeq	ILMN_212466	ILMN_212466	RBAK	NM_021326.2	NM_021326.2		57782	113865969	NM_021326.2	Rbak	NP_067301.1	ILMN_2626773	002480152	S	3333	CTGATAGGGAAGTACATAGCTTTCTATGTCGGTGCTTACCCGTAGAGTGG	5	-	143933930-143933979	5qG2	Mus musculus RB-associated KRAB repressor (Rbak), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212466	ILMN_212466	RBAK	NM_021326.2	NM_021326.2		57782	113865969	NM_021326.2	Rbak	NP_067301.1	ILMN_3130983	003610400	A	3155	CATGAAGCCAGCAGTTGAGCATGAGGGTGACTGAAACACGGCACTTCTGC	5	-	143934108-143934157	5qG2	Mus musculus RB-associated KRAB repressor (Rbak), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212466	ILMN_212466	RBAK	NM_021326.2	NM_021326.2		57782	113865969	NM_021326.2	Rbak	NP_067301.1	ILMN_3054271	002100653	I	245	CCCTGTGTAGACCAGTTAATCTCCGATTTCAGCGAGCTTTTCCTCCAGCA	5	-	143941222-143941271	5qG2	Mus musculus RB-associated KRAB repressor (Rbak), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_209171	ILMN_209171	1700021A07RIK	scl39095.3.1_54				51765472	XM_483874	1700021A07Rik		ILMN_1224685	006020427	S	98	TCCAAGGAGCCTCTCTCCACCATCTTCGTCCCTGAACATCCATCTCCCTG										
Mus musculus	RefSeq	ILMN_199880	ILMN_225353	GM1027	XM_993861.1	XM_993861.1		381538	94372093	XM_993861.1	Gm1027	XP_998955.1	ILMN_1248467	005490520	S	3740	GGCGGAACTCTTGGCCACTGCTGTATGGGGATTCATGGGTGTGTGACCCA				4qC7	PREDICTED: Mus musculus gene model 1027, (NCBI) (Gm1027), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215658	ILMN_233333	ARL13B	NM_026577.2	NM_026577.2		68146	61098121	NM_026577.2	Arl13b	NP_080853.2	ILMN_2741351	004830730	S	546	GAATTATTATGCTGAATCCTATGGGGTAATATTTGTTGTGGATTCCAGTG	16	-	62827028-62827077	16qC1.3	Mus musculus ADP-ribosylation factor-like 13B (Arl13b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Arl2l1; A930014M17Rik; C530009C10Rik; hnn; A530097K21Rik	Arl2l1; A930014M17Rik; C530009C10Rik; hnn; A530097K21Rik
Mus musculus	RefSeq	ILMN_185336	ILMN_233333	ARL13B	NM_026577.2	NM_026577.2		68146	61098121	NM_026577.2	Arl13b	NP_080853.2	ILMN_2426195	002060270	S	1589	GGATGGGTTGGTCCTTTTTATATCAGCAAGGTGAACTGAGACCTTTCCCC	16	-	62795357-62795406	16qC1.3	Mus musculus ADP-ribosylation factor-like 13B (Arl13b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Arl2l1; A930014M17Rik; C530009C10Rik; hnn; A530097K21Rik	Arl2l1; A930014M17Rik; C530009C10Rik; hnn; A530097K21Rik
Mus musculus	RefSeq	ILMN_193954	ILMN_233333	ARL13B	NM_026577.2	NM_026577.2		68146	61098121	NM_026577.2	Arl13b	NP_080853.2	ILMN_2501992	006280497	S	1660	CTGATGATGGGCAAGACAACCATAATGATTTCAGGGAAGAAAGAATATCC	16	-	62795286-62795335	16qC1.3	Mus musculus ADP-ribosylation factor-like 13B (Arl13b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Arl2l1; A930014M17Rik; C530009C10Rik; hnn; A530097K21Rik	Arl2l1; A930014M17Rik; C530009C10Rik; hnn; A530097K21Rik
Mus musculus	RefSeq	ILMN_209283	ILMN_231534	CAR10	NM_028296.2	NM_028296.2		72605	110625805	NM_028296.2	Car10	NP_082572.1	ILMN_2594325	004560519	S	2573	CACATAACTGTACTAGGACTTGCCCGAGATCAGAATCGATCCATTCGCTG	11	+	93462461-93462510	11qD	Mus musculus carbonic anhydrase 10 (Car10), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2700029L05Rik; BB085816	2700029L05Rik; BB085816
Mus musculus	MEEBO	ILMN_195902	ILMN_195902	FADS2	scl52762.14_136				9790070	NM_019699	Fads2		ILMN_2713071	001980639	S	1272	CCCCACTGGTGAAGTCTCTCTGCGCCAAGCATGGCATTGAATACCAGGAG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water [goid 16717] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence IDA]		
Mus musculus	MEEBO	ILMN_195902	ILMN_195902	FADS2	scl52762.14_136				9790070	NM_019699	Fads2		ILMN_2519802	005870653	S	15	AGGAAAAACAGGGTAGGGTGTGAGGTCTCAGGAGGGCTGTTGGGGGTACC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water [goid 16717] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence IDA]		
Mus musculus	RefSeq	ILMN_237161	ILMN_237161	MAML3	NM_001004176.1	NM_001004176.1		433586	61098004	NM_001004176.1	Maml3	NP_001004176.1	ILMN_2950067	001400091	S	2382	GCAGAGAAGGGATGTAGAGAGCAGGTGGGGAAATCGAGGCAACGGGAGCT	3	-	51493495-51493544	3qC	Mus musculus mastermind like 3 (Drosophila) (Maml3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISA]	KIAA1816; AV234550; MGC59565; BC049812; mKIAA1816	KIAA1816; AV234550; MGC59565; BC049812; mKIAA1816
Mus musculus	Riken	ILMN_205182	ILMN_205182	STXBP4	ri|C230090J03|PX00177K24|AK049001|2530					AK049001	Stxbp4		ILMN_1248334	002510347	S	2271	GACTGAAAAGAGAAGGGAATGTAAACCATCCAAGACCCAGCCCTCCTGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205454	ILMN_205454	4732450G04RIK	ri|4732450G04|PX00051O13|AK028740|2372					AK028740	4732450G04Rik		ILMN_2572671	002370634	S	1978	GTCCACCATAGACCCCAGGGCTGTGTGCAAAGAGCAGTGCATAGTTTCTG										
Mus musculus	RefSeq	ILMN_210240	ILMN_210240	PRAMEL7	NM_178250.2	NM_178250.2		347712	31342428	NM_178250.2	Pramel7	NP_839981.1	ILMN_1256946	004230296	S	1712	GTTTCACATAACCTCTCAATGTGCAATGGGGATATTCTGATATTTCCCCC	2	-	87329343-87329392	2qD	Mus musculus preferentially expressed antigen in melanoma like 7 (Pramel7), mRNA.				C81180; AA675346	C81180; AA675346
Mus musculus	RefSeq	ILMN_222445	ILMN_222445	ENOX1	NM_172813.2	NM_172813.2		239188	142385662	NM_172813.2	Enox1	NP_766401.1	ILMN_2749695	003060746	S	2911	GAGCAAATGCTTACAGTTAATGGCGCTGTAGCAATGGTGGTTGCCAGGCT	14	+	78121036-78121085	14qD3	Mus musculus ecto-NOX disulfide-thiol exchanger 1 (Enox1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D230005D02Rik; B230207J08	D230005D02Rik; B230207J08
Mus musculus	RefSeq	ILMN_197433	ILMN_197433	LOC381427	XM_358575.1	XM_358575.1			38075754	XM_358575.1	LOC381427		ILMN_1229031	000050753	S	466	CTCGGTCTCCTAGGAATGAAAGAACTCCTAGTACTGGTTGGAGCATGGCT										
Mus musculus	RefSeq	ILMN_214012	ILMN_317392	LOC100047606	XR_033719.1	XR_033719.1		100047606	149257371	XR_033719.1	LOC100047606		ILMN_2675199	004010411	S	1552	TGGCATGACCCGCATCCCAGTCATTGAGAACCCCCAGTACTTCCGTCAGG					PREDICTED: Mus musculus similar to neurotrophic tyrosine kinase, receptor, type 3 (LOC100047606), misc RNA.					
Mus musculus	RefSeq	ILMN_217517	ILMN_217517	ADRB2	NM_007420.2	NM_007420.2		11555	34328091	NM_007420.2	Adrb2	NP_031446.2	ILMN_1241610	003450440	S	1863	GGACTTGAAATATCCTGTGTCTTGGACCTTTCTGCTGTGACAATGGGCCC	18	-	62337701-62337750	18qE1	Mus musculus adrenergic receptor, beta 2 (Adrb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle contraction [goid 45986] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria [goid 50873] [evidence IGI]; Any homeostatic process by which an organism produces heat, thereby raising its internal temperature [goid 31649] [evidence IGI]; The process by which the secretion of norepinephrine or epinephrine into the bloodstream modulates the force with which blood passes through the circulatory system [goid 1993] [evidence IMP]; The process that results in increased metabolic rate in tissues of an organism. It is triggered by the detection of dietary excess. This process is achieved via signalling in the sympathetic nervous system [goid 2024] [evidence IGI]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IMP]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IGI]; Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4935] [evidence IEA];  [goid 4941] [evidence IDA]	Badm; Gpcr7; Adrb-2	Badm; Gpcr7; Adrb-2
Mus musculus	RefSeq	ILMN_221186	ILMN_221186	NFAT5	NM_018823.1	NM_018823.1		54446	9055287	NM_018823.1	Nfat5	NP_061293.1	ILMN_2732123	003370047	S	2179	CAGACAAGAGAAGCTCAGTCCAGAGACACAATACAGTCAGATACAGTGGT	8	+	109891243-109891292	8qD3	Mus musculus nuclear factor of activated T-cells 5 (Nfat5), transcript variant b, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The synthesis of RNA on a template of DNA [goid 6351] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	NFATL1; OREBP; mKIAA0827; TonEBP; nfatz; CAG80; CAG-8; B130038B15Rik; AI225870	NFATL1; OREBP; mKIAA0827; TonEBP; nfatz; CAG80; CAG-8; B130038B15Rik; AI225870
Mus musculus	RefSeq	ILMN_232170	ILMN_232170	CTCFL	NM_001081387.1	NM_001081387.1		664799	124487068	NM_001081387.1	Ctcfl	NP_001074856.1	ILMN_2855551	000070451	S	2515	TTTTTTCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCA	2	-	172919715-172919759:172919807-172919811	2qH3	Mus musculus CCCTC-binding factor (zinc finger protein)-like (Ctcfl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			Boris	Boris
Mus musculus	MEEBO	ILMN_211175	ILMN_211175	BC060615	scl0268515.3_2	NM_198423.1			39930582	NM_198423.1	BC060615		ILMN_2741694	002570041	S	3530	TGGTTTCCGTTTCCATGGCCAGTTTGATGCAGGGAGAGAAGCCTGGCCTT										
Mus musculus	MEEBO	ILMN_211175	ILMN_211175	BC060615	scl0268515.3_2	NM_198423.1			39930582	NM_198423.1	BC060615		ILMN_2741693	006420241	S	3527	TTCTGGTTTCCGTTTCCATGGCCAGTTTGATGCAGGGAGAGAAGCCTGGC										
Mus musculus	RefSeq	ILMN_214180	ILMN_214180	H28	NM_031367.1	NM_031367.1		15061	13811696	NM_031367.1	H28	NP_112735.1	ILMN_2645225	003840360	S	1903	CCTTCTCCAGTACATTATACAACTCTATGTACCGGAATTGACTGCACAGT				3qH3	Mus musculus histocompatibility 28 (H28), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IDA]		NS1178; H28-1; H-28	NS1178; H28-1; H-28
Mus musculus	RefSeq	ILMN_251980	ILMN_251980	GM851	NM_001033426.1	NM_001033426.1		332309	85701926	NM_001033426.1	Gm851	NP_001028598.1	ILMN_2985732	000770433	S	787	CAACCTTGCCGAATTTGCAGCCCATAGCCCGTAGCCCTGGTTTTCACATG	18	-	42112457-42112481:42112482-42112506	18qB3	Mus musculus gene model 851, (NCBI) (Gm851), mRNA.					
Mus musculus	RefSeq	ILMN_190457	ILMN_190457	USP3	NM_144937.3	NM_144937.3		235441	142361676	NM_144937.3	Usp3	NP_659186.1	ILMN_2470333	004040224	S	1664	CTGTAATACCTCCTGACCATGAGTCATCAACTACACCGGACAACATTTCC	9	-	66366175-66366219:66366220-66366224	9qC	Mus musculus ubiquitin specific peptidase 3 (Usp3), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC28886; AA409661; BC017156	MGC28886; AA409661; BC017156
Mus musculus	RefSeq	ILMN_217578	ILMN_217578	SSRP1	NM_182990.2	NM_182990.2		20833	111154062	NM_182990.2	Ssrp1	NP_892035.2	ILMN_2913544	003450202	S	2438	CCATCTGAGTAACTGCTCTTGGTGGCTTCCACTGCCCTGAGGCTTTGAGG				2qD	Mus musculus structure specific recognition protein 1 (Ssrp1), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Hmgox; T160; Hmgi-rs3; Hmg1-rs1; C81323	Hmgox; T160; Hmgi-rs3; Hmg1-rs1; C81323
Mus musculus	RefSeq	ILMN_214193	ILMN_214193	ANO1	NM_178642.4	NM_178642.4		101772	110835695	NM_178642.4	Ano1	NP_848757.3	ILMN_2645341	002750209	S	4013	CTCAGCACTTACCATTGTAATAGCTTCTAAAACAAGCCTCATGGGCCAGC	7	-	151774869-151774918	7qF5	Mus musculus anoctamin 1, calcium activated chloride channel (Ano1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AW559012; AU040576	AW559012; AU040576
Mus musculus	Riken	ILMN_204655	ILMN_204655	8030441M13RIK	ri|8030441M13|PX00103M06|AK033123|2353					AK033123	8030441M13Rik		ILMN_1224477	002340091	S	2041	GTCTGTGAAACCTCCCTAAGCCCAGGCGTTTGCTAAGTTCTTGTGAAGCC										
Mus musculus	Riken	ILMN_201751	ILMN_201751	NNMT	ri|1700026B06|ZX00047C17|AK006371|700					AK006371	Nnmt		ILMN_2544305	002070519	S	525	CTGTTCGAGATGCTGTGGAAGAGGCCGGTTACACCATTGAGCAGTTTGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + nicotinamide = S-adenosyl-L-homocysteine + 1-methylnicotinamide [goid 8112] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223941	ILMN_311715	LOC100040020	XM_001473955.1	XM_001473955.1		100040020	149272471	XM_001473955.1	LOC100040020	XP_001474005.1	ILMN_1249291	002190162	S	429	GTCTGTTAGCAGCATGTTCGCATTTGTTTCTGTGATCTGGAACCACATGG	X	-	150500079-150500128	XqF3	PREDICTED: Mus musculus hypothetical protein LOC100040020 (LOC100040020), mRNA.					
Mus musculus	RefSeq	ILMN_219983	ILMN_219983	NHEDC2	NM_178877.5	NM_178877.5		97086	142368598	NM_178877.5	Nhedc2	NP_849208.3	ILMN_1255047	002360121	S	1860	GCTAACAGTACCTCAGGTGTTTACTTCCTCAGAAAGACCGGAGGACAGGT	3	+	135005395-135005444	3qG3	Mus musculus Na+/H+ exchanger domain containing 2 (Nhedc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]	C80638	C80638
Mus musculus	RefSeq	ILMN_203107	ILMN_219983	NHEDC2	NM_178877.5	NM_178877.5		97086	142368598	NM_178877.5	Nhedc2	NP_849208.3	ILMN_1255140	007400440	S	724	CGTGGAGGCGTGTGCTTCTGCGATTCTCTCACACTTCCTGATGGGGTTGC	3	+	134987526-134987575	3qG3	Mus musculus Na+/H+ exchanger domain containing 2 (Nhedc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]	C80638	C80638
Mus musculus	RefSeq	ILMN_229588	ILMN_229588	HORMAD2	NM_029458.1	NM_029458.1		75828	113931161	NM_029458.1	Hormad2	NP_083734.1	ILMN_2929259	006840184	S	1019	GGCTAGACTGTGACGAGGAAGAGGAGGCCTGCGGCAGTCAAGTCCAAAGA	11	-	4246660-4246669:4308593-4308632	11qA1	Mus musculus HORMA domain containing 2 (Hormad2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930529M09Rik; RP23-329P17.4	4930529M09Rik; RP23-329P17.4
Mus musculus	RefSeq	ILMN_194113	ILMN_315920	LOC100046963	XM_001477151.1	XM_001477151.1		100046963	149270632	XM_001477151.1	LOC100046963	XP_001477201.1	ILMN_1220560	000580445	S	2894	CACTGGCACGGCTGTTGTTAGCTCTGATGACTGGGCAAACGGATTCTAAA					PREDICTED: Mus musculus similar to phosphoglucomutase 5 (LOC100046963), mRNA.					
Mus musculus	RefSeq	ILMN_222901	ILMN_222901	CEBPB	NM_009883.3	NM_009883.3		12608	145301630	NM_009883.3	Cebpb	NP_034013.1	ILMN_2756435	004230348	S	1172	ACAGCGCACCGGGTTTCGGGACTTGATGCAATCCGGATCAAACGTGGCTG				2qH3	Mus musculus CCAAT/enhancer binding protein (C/EBP), beta (Cebpb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45408] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	CRP2; Nfil6; LAP; IL-6DBP; NF-M; NF-IL6	CRP2; Nfil6; LAP; IL-6DBP; NF-M; NF-IL6
Mus musculus	RefSeq	ILMN_249625	ILMN_249625	OLFR371	NM_146859.1	NM_146859.1		258858	49170061	NM_146859.1	Olfr371	NP_667070.1	ILMN_2816895	001010500	S	871	AGCCTGAGGAACAGGGACATGAAGAGAGCCCTGAATACACTACTATGTAG	8	+	87755266-87755315	8qC3	Mus musculus olfactory receptor 371 (Olfr371), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC157530; MOR141-3	MGC157530; MOR141-3
Mus musculus	RefSeq	ILMN_198886	ILMN_249625	OLFR371	NM_146859.1	NM_146859.1		258858	49170061	NM_146859.1	Olfr371	NP_667070.1	ILMN_1236545	004920131	S	777	CCTCAGTTCTATCTGGACACAGGCTTCTTGGGCAGGGGTGTTTGCTTCTG	8	+	87755172-87755221	8qC3	Mus musculus olfactory receptor 371 (Olfr371), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC157530; MOR141-3	MGC157530; MOR141-3
Mus musculus	RefSeq	ILMN_214389	ILMN_214389	FKBP2	NM_008020.2	NM_008020.2		14227	40254639	NM_008020.2	Fkbp2	NP_032046.1	ILMN_2962273	004200735	S	342	CAGGGGCTGCTGGGGATGTGTGAAGGGGAAAAGCGGAAGTTGGTGATCCC	19	-	7052890-7052926:7053048-7053060	19qA	Mus musculus FK506 binding protein 2 (Fkbp2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	mFKBP2; 13kDa; mFKBP13	mFKBP2; 13kDa; mFKBP13
Mus musculus	RefSeq	ILMN_214389	ILMN_214389	FKBP2	NM_008020.2	NM_008020.2		14227	40254639	NM_008020.2	Fkbp2	NP_032046.1	ILMN_1220875	001050082	S	80	GAGGCTGAGCTGGATCCTGACAATACTGTCCATTTGCCTGAGTGCCCTGG	19	-	7053575-7053624	19qA	Mus musculus FK506 binding protein 2 (Fkbp2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	mFKBP2; 13kDa; mFKBP13	mFKBP2; 13kDa; mFKBP13
Mus musculus	MEEBO	ILMN_210721	ILMN_210721	9530019H20RIK	scl34736.1_398	NM_177308.2			31343304	NM_177308.2	9530019H20Rik		ILMN_2608502	000270689	S	1826	CTCTGTGTTACTTCCCTTCTCTCTTGGTTTTGGCCATTTGCTTCCGTTTC										
Mus musculus	Riken	ILMN_205817	ILMN_205817	A430037M23RIK	ri|A430037M23|PX00135O11|AK039975|4510					AK039975	A430037M23Rik		ILMN_2575438	006060544	S	4333	GCGCTTTGGTAGTTGGTAGTGGTGGTAATGGTGGTGGCAGAGGGCTTGCA										
Mus musculus	RefSeq	ILMN_212142	ILMN_212142	PLEKHA7	NM_172743.2	NM_172743.2		233765	142374469	NM_172743.2	Plekha7	NP_766331.1	ILMN_2623199	005690368	S	4118	TACGCTGTCCAGGAAATTAACTGCAGAGGTCCGCATCCCTGAACCGATGC	7	-	123267776-123267825	7qF1	Mus musculus pleckstrin homology domain containing, family A member 7 (Plekha7), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A430081P20Rik; AI414265; MGC90927	A430081P20Rik; AI414265; MGC90927
Mus musculus	MEEBO	ILMN_215853	ILMN_215853	CLK1	scl16734.10.1_6	NM_009905.1			6753445	NM_009905.1	Clk1		ILMN_1254814	002190220	S	1310	GCTATCTCAGGATGCCGAACATGAGTTTCTCTTTGACCTCGTTGGGAAAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223685	ILMN_223685	AU022870	NM_177682.3	NM_177682.3		231874	32129297	NM_177682.3	AU022870	NP_808350.1	ILMN_2767674	005080551	S	1450	CCACGCAGTTCAACAACATCTTCTTCTTGGATTGACTCCACTGGCTCAGC	5	-	144749047-144749062:144749063-144749096	5qG2	Mus musculus expressed sequence AU022870 (AU022870), mRNA.				MGC56855	MGC56855
Mus musculus	RefSeq	ILMN_223059	ILMN_223059	CORO7	NM_030205.2	NM_030205.2		78885	31560027	NM_030205.2	Coro7	NP_084481.2	ILMN_2758762	006840092	S	3726	GGCAGGGTCAGGGCCTGAGGGGGAGATGTTTCCGTTCCTAAAGTGAAAAC	16	-	4541829-4541878	16qA1	Mus musculus coronin 7 (Coro7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]			0610011B16Rik; AW048373; AW556392	0610011B16Rik; AW048373; AW556392
Mus musculus	Riken	ILMN_206559	ILMN_206559	E330032E20RIK	ri|E330032E20|PX00212P18|AK087861|1911					AK087861	E330032E20Rik		ILMN_2581001	006220022	S	852	TTTTAAACCCCAATTCTTGTTTCCCCCAAGAAGGGCCCAGCCAGGGCTTC										
Mus musculus	RefSeq	ILMN_197644	ILMN_197644	LOC242235	XM_143529.2	XM_143529.2			38077085	XM_143529.2	LOC242235		ILMN_2528853	004050307	S	1701	CACCTTTTCTACCAACAGAGTTGAGGGGCGTGGCTCACAGTGGTCATTGC										
Mus musculus	RefSeq	ILMN_214867	ILMN_214867	IFI47	NM_008330.1	NM_008330.1		15953	6680358	NM_008330.1	Ifi47	NP_032356.1	ILMN_2652857	001090139	S	1504	CCCTCTAGAGATTACTACCATGCATGAATTGTTTTTTGCTCATACCCTGT	11	+	48910304-48910353	11qB1.2	Mus musculus interferon gamma inducible protein 47 (Ifi47), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]		47kDa; Iipg4; Iigp4; Olfr56; IRG-47	47kDa; Iipg4; Iigp4; Olfr56; IRG-47
Mus musculus	RefSeq	ILMN_245276	ILMN_245276	ZFP238	NM_001012330.1	NM_001012330.1		30928	59889575	NM_001012330.1	Zfp238	NP_001012330.1	ILMN_3124947	004780609	A	3178	GCCAGCGCGGGGCAGAAGCGTTTTGCACACTGTTTGTTTTCCTGTCTTGC	1	+	179380235-179380284	1qH4	Mus musculus zinc finger protein 238 (Zfp238), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP58	RP58
Mus musculus	RefSeq	ILMN_245276	ILMN_245276	ZFP238	NM_001012330.1	NM_001012330.1		30928	59889575	NM_001012330.1	Zfp238	NP_001012330.1	ILMN_3049032	002340021	I	91	CCACCGATGTAACAGACCTGCAGCCAGCAAGACTCCGAGGGAAGGACTTA	1	+	179374882-179374931	1qH4	Mus musculus zinc finger protein 238 (Zfp238), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP58	RP58
Mus musculus	RefSeq	ILMN_218101	ILMN_244078	4930430F08RIK	NM_175128.1	NM_175128.1		68281	28201990	NM_175128.1	4930430F08Rik	NP_780337.1	ILMN_2691664	001570129	S	1326	TTACTATTTTCATAATAACTTAAATTTTCAAAAAGCATAAAGGTAAGCTT	10	-	100035907-100035956	10qD1	Mus musculus RIKEN cDNA 4930430F08 gene (4930430F08Rik), mRNA.				A730088G13Rik; 4930571E09Rik; C430008C19Rik; AW551239	A730088G13Rik; 4930571E09Rik; C430008C19Rik; AW551239
Mus musculus	RefSeq	ILMN_218207	ILMN_218207	SNTB2	NM_009229.2	NM_009229.2		20650	31543753	NM_009229.2	Sntb2	NP_033255.1	ILMN_2692942	007550768	S	3755	TATTGGGGATGTTGTGGGCTCCTGGGTGTGAGTGGGCAGGAAACTGTGGA	8	+	109902653-109902702	8qD3	Mus musculus syntrophin, basic 2 (Sntb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Snt2	Snt2
Mus musculus	RefSeq	ILMN_210003	ILMN_233933	9430038I01RIK	XM_925223.2	XM_925223.2		77252	94381365	XM_925223.2	9430038I01Rik	XP_930316.1	ILMN_2601254	001030243	S	1030	GGTTCTGGATCCTCGCAGCTCTCGTAGTCATTGGGCGCAGCCGGAGATCT				7qF4	PREDICTED: Mus musculus RIKEN cDNA 9430038I01 gene, transcript variant 9 (9430038I01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221000	ILMN_221000	FBP1	NM_019395.2	NM_019395.2		14121	118130795	NM_019395.2	Fbp1	NP_062268.1	ILMN_2785586	003180671	S	1104	TAGACATCGTTCCCACCGAGATCCACCAGAAGGCACCAGTCGTCATGGGG	13	-	62966392-62966441	13qB3	Mus musculus fructose bisphosphatase 1 (Fbp1), mRNA.		The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 42132] [evidence IEA]; Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3 [goid 42578] [evidence IEA]	Fbp2; FBPase 1; Fbp-2	Fbp2; FBPase 1; Fbp-2
Mus musculus	RefSeq	ILMN_251976	ILMN_251976	ALDH3A2	NM_007437.2	NM_007437.2		11671	75677434	NM_007437.2	Aldh3a2	NP_031463.2	ILMN_2925350	006130523	S	2772	GCCGTGTTTTGCTGAGTAACCTGTCCCACCGTTGAGGCTATCTGAAGTGT	11	-	61061259-61061308	11qB2	Mus musculus aldehyde dehydrogenase family 3, subfamily A2 (Aldh3a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]	Ahd3-r; Ahd-3; Ahd-3r; Ahd3; Aldh4; Aldh4-r; AI194803	Ahd3-r; Ahd-3; Ahd-3r; Ahd3; Aldh4; Aldh4-r; AI194803
Mus musculus	RefSeq	ILMN_204414	ILMN_253308	LRP8	NM_001080926.1	NM_001080926.1		16975	124286869	NM_001080926.1	Lrp8	NP_001074395.1	ILMN_1249775	001110026	S	3088	GGGACAGCCACTGCTGAGTGACTAACATGATGCACATAACCAAACGGGGC					Mus musculus low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (Lrp8), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex [goid 21819] [evidence IGI]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IGI]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lr8b; 4932703M08Rik; apoER2	Lr8b; 4932703M08Rik; apoER2
Mus musculus	RefSeq	ILMN_215716	ILMN_253308	LRP8	NM_001080926.1	NM_001080926.1		16975	124286869	NM_001080926.1	Lrp8	NP_001074395.1	ILMN_2751092	004590703	S	2656	GGGAGAACCAAGGTCACAGCTTCACCAACTCCCGAAGAACCCTCTTTCCG					Mus musculus low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (Lrp8), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex [goid 21819] [evidence IGI]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IGI]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lr8b; 4932703M08Rik; apoER2	Lr8b; 4932703M08Rik; apoER2
Mus musculus	RefSeq	ILMN_204795	ILMN_253308	LRP8	NM_001080926.1	NM_001080926.1		16975	124286869	NM_001080926.1	Lrp8	NP_001074395.1	ILMN_1247823	005960131	S	3836	GAGCAACCATTGTCAACCTTTGTGGGTCGCCTAAGAGCATCGCAAACCAG					Mus musculus low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (Lrp8), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex [goid 21819] [evidence IGI]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IGI]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lr8b; 4932703M08Rik; apoER2	Lr8b; 4932703M08Rik; apoER2
Mus musculus	RefSeq	ILMN_215716	ILMN_253308	LRP8	NM_001080926.1	NM_001080926.1		16975	124286869	NM_001080926.1	Lrp8	NP_001074395.1	ILMN_2662779	005870301	S	2668	GTCACAGCTTCACCAACTCCCGAAGAACCCTCTTTCCGAGCTGCCTGTCG					Mus musculus low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (Lrp8), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex [goid 21819] [evidence IGI]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IGI]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lr8b; 4932703M08Rik; apoER2	Lr8b; 4932703M08Rik; apoER2
Mus musculus	RefSeq	ILMN_214293	ILMN_214293	BC027344	NM_173738.2	NM_173738.2		233057	31343455	NM_173738.2	BC027344	NP_776099.1	ILMN_1214859	007000035	S	2239	GCCAGGATGCAACGCACTCTCACCACATCCTTTGCAAGCACGTGTACAGC	7	-	30629430-30629479	7qB1	Mus musculus cDNA sequence BC027344 (BC027344), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220262	ILMN_220262	CROT	NM_023733.3	NM_023733.3		74114	142387204	NM_023733.3	Crot	NP_076222.1	ILMN_2719877	005890398	S	2480	GTACAATAGTGATCTAAAATAGCTCCTTTGAGCAGGCAAAAGGATCAAGT	5	-	8966321-8966370	5qA1	Mus musculus carnitine O-octanoyltransferase (Crot), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15908] [evidence IDA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: octanoyl-CoA + L-carnitine = CoA + L-octanoylcarnitine [goid 8458] [evidence IDA]	1200003H03Rik	1200003H03Rik
Mus musculus	RefSeq	ILMN_196892	ILMN_196892	LOC380753	XM_354666.1	XM_354666.1			38049430	XM_354666.1	LOC380753		ILMN_2526163	002710717	S	3158	CCTGTCACCTCTGCTGATGTTCTAGAGGTTTCTGTGACTGCCTGGAGAAC										
Mus musculus	RefSeq	ILMN_221280	ILMN_221280	A530099J19RIK	NM_175688.3	NM_175688.3		319293	142354396	NM_175688.3	A530099J19Rik	NP_783619.1	ILMN_1221040	006590592	S	2624	TTCCCATAGAGGAAGGCAGCTCTTTGCTACACCCCTTCTACACTGATATT	13	-	19819385-19819434	13qA2	Mus musculus RIKEN cDNA A530099J19 gene (A530099J19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213334	ILMN_240089	1200003I07RIK	NM_001039967.1	NM_001039967.1		66869	90577170	NM_001039967.1	1200003I07Rik	NP_001035056.1	ILMN_2636069	004280528	S	172	CTGACTAACTGTGCATCTCCGAGTTTGCTGCGGAGGGGCTTCTCTACCTC	8	-	72238222-72238271	8qB3.3	Mus musculus RIKEN cDNA 1200003I07 gene (1200003I07Rik), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213334	ILMN_240089	1200003I07RIK	NM_001039967.1	NM_001039967.1		66869	90577170	NM_001039967.1	1200003I07Rik	NP_001035056.1	ILMN_2755544	005550162	S	2873	TCAGGGTTTTAAAGTTGTGTTTACATCCGTCTGAAACATCCAGCAGGGGT	8	-	72229401-72229450	8qB3.3	Mus musculus RIKEN cDNA 1200003I07 gene (1200003I07Rik), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213334	ILMN_240089	1200003I07RIK	NM_001039967.1	NM_001039967.1		66869	90577170	NM_001039967.1	1200003I07Rik	NP_001035056.1	ILMN_1254390	006290397	S	2840	CGGTCTGGGGAGAACAGACCTTCGTAAATGTCTTCAGGGTTTTAAAGTTG	8	-	72229434-72229483	8qB3.3	Mus musculus RIKEN cDNA 1200003I07 gene (1200003I07Rik), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214282	ILMN_214282	MARVELD1	scl53115.2.1_29	NM_183195.1			34328085	NM_183195.1	Marveld1		ILMN_1238644	005820010	S	2377	GGTCACTTGGGACTGAACTCTGCCCATCTCCCATTGCCTAAATGACAGGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_202202	ILMN_202202	1700108K13RIK	ri|1700108K13|ZX00077D12|AK007138|1254					AK007138	1700108K13Rik		ILMN_1260113	001400129	S	353	GAACAAACTAACAGTTCACTCAAGAGTTCACAAGCCAGAGCCGGATCCTA										
Mus musculus	RefSeq	ILMN_195471	ILMN_232814	BRDT	NM_054054.2	NM_054054.2		114642	120431735	NM_054054.2	Brdt	NP_473395.2	ILMN_2515856	002570253	S	4624	AACATTGCTTTCAGGAAACAACCAGAATTAAAGTGATAGATATTTTGTTG	5	+	107788968-107789006:107793342-107793352	5qE5	Mus musculus bromodomain, testis-specific (Brdt), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IDA]	7420412D09Rik; Fsrg3; Brd6	7420412D09Rik; Fsrg3; Brd6
Mus musculus	RefSeq	ILMN_195471	ILMN_232814	BRDT	NM_054054.2	NM_054054.2		114642	120431735	NM_054054.2	Brdt	NP_473395.2	ILMN_2705747	002970475	S	3017	CCGTCGGAAGCTCAAGACGTAAGCAAGCTCTGGCTTCTCAAAGACCGGAA	5	+	107783321-107783370	5qE5	Mus musculus bromodomain, testis-specific (Brdt), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IDA]	7420412D09Rik; Fsrg3; Brd6	7420412D09Rik; Fsrg3; Brd6
Mus musculus	RefSeq	ILMN_186325	ILMN_256638	PPFIA2	NM_177373.3	NM_177373.3		327814	40789297	NM_177373.3	Ppfia2	NP_796347.2	ILMN_2743205	003520136	S	5360	GTTTCGATGTCTATTTTTGTTGAACAGATTCAATCAAACGGTAATGGTAA	10	+	106369479-106369528	10qD1	Mus musculus protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 (Ppfia2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA4112; 5330438O12; mKIAA4112; E130120L08Rik; B230207K17Rik	KIAA4112; 5330438O12; mKIAA4112; E130120L08Rik; B230207K17Rik
Mus musculus	RefSeq	ILMN_196408	ILMN_196408	2610021K21RIK	XM_354690.1	XM_354690.1			38073606	XM_354690.1	2610021K21Rik		ILMN_2737686	002350470	S	597	TTTCAAGAGGGCGTTTAGTCGAGTGGCTCCCAAGCTACCAGCGAGGACAG								Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215394	ILMN_215394	DGKA	NM_016811.2	NM_016811.2		13139	31560473	NM_016811.2	Dgka	NP_058091.2	ILMN_2658961	003940672	S	2545	GCCTACCTCCCAGTTCCTGAAGATTTCCTACTGTCTAGATGCTGCCACAC	10	-	128157410-128157459	10qD3	Mus musculus diacylglycerol kinase, alpha (Dgka), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]	AW146112; 80kDa; Dagk1	AW146112; 80kDa; Dagk1
Mus musculus	RefSeq	ILMN_215394	ILMN_215394	DGKA	NM_016811.2	NM_016811.2		13139	31560473	NM_016811.2	Dgka	NP_058091.2	ILMN_2940446	000050286	S	2355	GGCCAAGTGCTCCGAGATCACATTCCAGACCACAAAAACCCTCCCCATGC	10	-	128157810-128157833:128158008-128158033	10qD3	Mus musculus diacylglycerol kinase, alpha (Dgka), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]	AW146112; 80kDa; Dagk1	AW146112; 80kDa; Dagk1
Mus musculus	RefSeq	ILMN_222098	ILMN_258194	SHROOM4	NM_001040459.1	NM_001040459.1		208431	94818778	NM_001040459.1	Shroom4	NP_001035549.1	ILMN_1231699	002710678	S	3695	CTGTGACCCCAAAACAAGAGTTTCAGCACTTCTCACCTCCTAAGGGGGCC	X	+	6201542-6201554:6206219-6206255	XqA1.1	Mus musculus shroom family member 4 (Shroom4), mRNA.	A two-stranded helical polymer of the protein actin [goid 31941] [evidence ISS]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [evidence ISS]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IDA]; A myosin complex containing two class II myosin heavy chains, two myosin essential light chains and two myosin regulatory light chains. Also known as classical myosin or conventional myosin, the myosin II class includes the major muscle myosin of vertebrate and invertebrate muscle, and is characterized by alpha-helical coiled coil tails that self assemble to form a variety of filament structures [goid 16460] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	Gm724; D430043L16Rik	Gm724; D430043L16Rik
Mus musculus	RefSeq	ILMN_200753	ILMN_258194	SHROOM4	NM_001040459.1	NM_001040459.1		208431	94818778	NM_001040459.1	Shroom4	NP_001035549.1	ILMN_1238259	000540068	S	187	GGCACTCCATTGTATGGCTCCCGCCAAGAGGCCCTCATCCTTATCAAAGG	X	+	6097980-6098029	XqA1.1	Mus musculus shroom family member 4 (Shroom4), mRNA.	A two-stranded helical polymer of the protein actin [goid 31941] [evidence ISS]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [evidence ISS]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IDA]; A myosin complex containing two class II myosin heavy chains, two myosin essential light chains and two myosin regulatory light chains. Also known as classical myosin or conventional myosin, the myosin II class includes the major muscle myosin of vertebrate and invertebrate muscle, and is characterized by alpha-helical coiled coil tails that self assemble to form a variety of filament structures [goid 16460] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	Gm724; D430043L16Rik	Gm724; D430043L16Rik
Mus musculus	RefSeq	ILMN_192037	ILMN_229956	SLC4A11	NM_001081162.1	NM_001081162.1		269356	124487206	NM_001081162.1	Slc4a11	NP_001074631.1	ILMN_2484420	004850482	S	3066	GGGTGGGGCTAAGAAGAGTGGATATTCTTTTGATAAAAGAGTTGATGCCC	2	-	130509929-130509978	2qF1	Mus musculus solute carrier family 4, sodium bicarbonate transporter-like, member 11 (Slc4a11), mRNA.				AI503023	AI503023
Mus musculus	RefSeq	ILMN_205087	ILMN_229956	SLC4A11	NM_001081162.1	NM_001081162.1		269356	124487206	NM_001081162.1	Slc4a11	NP_001074631.1	ILMN_1255284	002470154	S	1455	ATGCACTGTTCTCTGGGCAGCCCCTGGTGATACTGTTGACAACCGCACCC	2	-	130513125-130513174	2qF1	Mus musculus solute carrier family 4, sodium bicarbonate transporter-like, member 11 (Slc4a11), mRNA.				AI503023	AI503023
Mus musculus	RefSeq	ILMN_192993	ILMN_192993	TXN2	NM_019913.5	NM_019913.5		56551	146134885	NM_019913.5	Txn2	NP_064297.1	ILMN_1257624	007550711	S	1144	GAACAGAGCCCACCCCATAGCCTAAATCTGTCCCTTCTATTCCTTGTCCC				15qE1	Mus musculus thioredoxin 2 (Txn2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol [goid 6662] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	2510006J11Rik; AI788873	2510006J11Rik; AI788873
Mus musculus	RefSeq	ILMN_261868	ILMN_261868	MAT2A	NM_145569.2	NM_145569.2		232087	31559936	NM_145569.2	Mat2a	NP_663544.1	ILMN_2978838	001580187	S	2605	GCTGGTGCAGCTGGCCATGGAGAAAGCTGACTTGGCTGGTGTGGTACAGA	6	-	72362457-72362506	6qC1	Mus musculus methionine adenosyltransferase II, alpha (Mat2a), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism [goid 6556] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine [goid 4478] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC6545; D630045P18Rik	MGC6545; D630045P18Rik
Mus musculus	MEEBO	ILMN_211810	ILMN_211810	1700009P13RIK	scl0215814.3_35	NM_144820.1			21450196	NM_144820.1	1700009P13Rik		ILMN_2716643	007570192	S	1813	GAGTGGGATTAGTGTCCTAGGAAAAGAGGCTGAAAAGAGACACCCCTCTG										
Mus musculus	RefSeq	ILMN_212003	ILMN_212003	ELF3	NM_007921.2	NM_007921.2		13710	133892374	NM_007921.2	Elf3	NP_031947.1	ILMN_2692072	004290075	S	1643	GACGGGGGTCGGATCATCCCTAATTTATGTGCTATAAATATTCCAGGTGT	1	-	137150364-137150413	1qE4	Mus musculus E74-like factor 3 (Elf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The tissue remodeling that removes differentiated mammary epithelia during weaning [goid 60056] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	jen; ESX; ESE-1	jen; ESX; ESE-1
Mus musculus	RefSeq	ILMN_212003	ILMN_212003	ELF3	NM_007921.2	NM_007921.2		13710	133892374	NM_007921.2	Elf3	NP_031947.1	ILMN_2621659	004180446	S	343	ACAAGTATGACGCCAGCTCCATCGACTTCTCCCGCTGCGACATGGACGGA	1	-	137153669-137153718	1qE4	Mus musculus E74-like factor 3 (Elf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The tissue remodeling that removes differentiated mammary epithelia during weaning [goid 60056] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	jen; ESX; ESE-1	jen; ESX; ESE-1
Mus musculus	MEEBO	ILMN_193715	ILMN_193715	MARE	scl40389.15_201				38194221	NM_181569	Mare		ILMN_2499735	005360014	S	20	TCCTTGAGGGAACGGCCGACAGTGCTTTTTCGGAGGGAGTTACGAAGCTG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_222978	ILMN_222978	2900090M10RIK	scl23579.11.1_38	NM_177868.2			31342808	NM_177868.2	2900090M10Rik		ILMN_1231749	004250630	S	1879	CCCGCTTTATCTAAGAGAGACTCGCCCCTACCTGCAGATCCTAGTGGGTC										
Mus musculus	RefSeq	ILMN_222944	ILMN_222944	IL10	NM_010548.1	NM_010548.1		16153	6754317	NM_010548.1	Il10	NP_034678.1	ILMN_1238505	001260632	S	961	AGGCTGGCCACACTTGAGAGCTGCAGGGCCCTTTGCTATGGTGTCCTTTC	1	+	132921204-132921253	1qE4	Mus musculus interleukin 10 (Il10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45348] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence ISO]; Any process that activates or increases the frequency, rate, or extent of B cell apoptosis [goid 2904] [evidence ISO]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence ISO]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production [goid 32695] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid dendritic cell activation [goid 30886] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IMP]	CSIF; Il-10	CSIF; Il-10
Mus musculus	RefSeq	ILMN_210944	ILMN_210944	RRM2B	NM_199476.1	NM_199476.1		382985	41054951	NM_199476.1	Rrm2b	NP_955770.1	ILMN_2610847	003400240	S	3115	TCCTATAATATGTTGAGACTGTTACATCCTTTAAACTTCATCCATCATGA	15	-	37855055-37855104	15qB3.1	Mus musculus ribonucleotide reductase M2 B (TP53 inducible) (Rrm2b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A organ system process carried out by any of the organs or tissues of the renal system. The renal system is responsible for fluid volume regulation and detoxification in an organism [goid 3014] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]; The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose sugar esterified with diphosphate on its glycose moiety [goid 9186] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The chemical reactions and pathways involving a deoxyribonucleoside triphosphate, a glycosamine consisting of a base linked to a deoxyribose sugar esterified with triphosphate on its glycose moiety [goid 9200] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whereby new strands of DNA are synthesized in the mitochondrion [goid 6264] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	p53R2	p53R2
Mus musculus	RefSeq	ILMN_210944	ILMN_210944	RRM2B	NM_199476.1	NM_199476.1		382985	41054951	NM_199476.1	Rrm2b	NP_955770.1	ILMN_1258823	003850328	S	4187	TTTTTTCACAATTAAGCAAAGACTCCAATGTCACTTCATTGATATGGAAA	15	-	37853983-37854032	15qB3.1	Mus musculus ribonucleotide reductase M2 B (TP53 inducible) (Rrm2b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A organ system process carried out by any of the organs or tissues of the renal system. The renal system is responsible for fluid volume regulation and detoxification in an organism [goid 3014] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]; The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose sugar esterified with diphosphate on its glycose moiety [goid 9186] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The chemical reactions and pathways involving a deoxyribonucleoside triphosphate, a glycosamine consisting of a base linked to a deoxyribose sugar esterified with triphosphate on its glycose moiety [goid 9200] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whereby new strands of DNA are synthesized in the mitochondrion [goid 6264] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	p53R2	p53R2
Mus musculus	RefSeq	ILMN_210944	ILMN_210944	RRM2B	NM_199476.1	NM_199476.1		382985	41054951	NM_199476.1	Rrm2b	NP_955770.1	ILMN_2994744	003520113	S	4292	GAATTCACTGAGGGAGTTGTCACCCAGCTCAGACAGAACTTGGGGCTGGT	15	-	37853878-37853927	15qB3.1	Mus musculus ribonucleotide reductase M2 B (TP53 inducible) (Rrm2b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A organ system process carried out by any of the organs or tissues of the renal system. The renal system is responsible for fluid volume regulation and detoxification in an organism [goid 3014] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]; The chemical reactions and pathways involving a deoxyribonucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose sugar esterified with diphosphate on its glycose moiety [goid 9186] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The chemical reactions and pathways involving a deoxyribonucleoside triphosphate, a glycosamine consisting of a base linked to a deoxyribose sugar esterified with triphosphate on its glycose moiety [goid 9200] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whereby new strands of DNA are synthesized in the mitochondrion [goid 6264] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	p53R2	p53R2
Mus musculus	RefSeq	ILMN_188558	ILMN_188558	UROD	NM_009478.3	NM_009478.3		22275	145301611	NM_009478.3	Urod	NP_033504.2	ILMN_2453695	004480326	S	1109	CGCCTGCTTCGACAGAATTGAGTACATGCCTTTCTGCTCAAGTGCCACCA				4qD1	Mus musculus uroporphyrinogen decarboxylase (Urod), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The chemical reactions and pathways involving heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 42168] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IEA]	Catalysis of the reaction: uroporphyrinogen-III = coproporphyrinogen + 4 CO2 [goid 4853] [evidence IDA]; Catalysis of the reaction: uroporphyrinogen-III = coproporphyrinogen + 4 CO2 [goid 4853] [evidence IMP]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]	AI323803; Uro-d	AI323803; Uro-d
Mus musculus	RefSeq	ILMN_212670	ILMN_212670	SRPX	NM_016911.4	NM_016911.4		51795	146134327	NM_016911.4	Srpx	NP_058607.1	ILMN_1238000	006380452	S	1237	ACATGTCACCGTGGTGGAGCTGGTAGGGGTCTTCCCAACTCTCATCGGCA				XqA1.1	Mus musculus sushi-repeat-containing protein (Srpx), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mDRS-2; drs-1; mDRS-1; drs; drs-2	mDRS-2; drs-1; mDRS-1; drs; drs-2
Mus musculus	RefSeq	ILMN_212670	ILMN_212670	SRPX	NM_016911.4	NM_016911.4		51795	146134327	NM_016911.4	Srpx	NP_058607.1	ILMN_2629486	006350474	S	1458	CCCTGAGAAAAGAAGAGATGATCCTGCAGGCTGAGATGGGCCAGACTTGC				XqA1.1	Mus musculus sushi-repeat-containing protein (Srpx), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mDRS-2; drs-1; mDRS-1; drs; drs-2	mDRS-2; drs-1; mDRS-1; drs; drs-2
Mus musculus	MEEBO	ILMN_194285	ILMN_194285	LHX3	scl19534.8_623				6754539	NM_010711	Lhx3		ILMN_1236482	006200041	S	1080	GTATACCCAGACACCAACTTGAGCCTTGTCCTTCAGGGCCCCCAGGTGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of medial motor column neurons. Medial motor column neurons are generated at all rostrocaudal levels and send axons to the axial muscles (medial group) and to the body wall muscles (lateral group). Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21526] [evidence IGI]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194285	ILMN_194285	LHX3	scl19534.8_623				6754539	NM_010711	Lhx3		ILMN_2725341	002140494	S	29	CCCCGCACGAACCACTGGATTAGTGACTGCCATGCTGCTAGAAGCAGAAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of medial motor column neurons. Medial motor column neurons are generated at all rostrocaudal levels and send axons to the axial muscles (medial group) and to the body wall muscles (lateral group). Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21526] [evidence IGI]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201541	ILMN_201541	RAET1C	NM_009018.1	NM_009018.1		19370	6679620	NM_009018.1	Raet1c	NP_033044.1	ILMN_2799851	001820500	S	1138	CCAGTTATCACATCGTTTGTAGCAATGTATGATGGAGGACATCCAGGTCT	10	+	21873236-21873285		Mus musculus retinoic acid early transcript gamma (Raet1c), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]	RAE-1gamma	RAE-1gamma
Mus musculus	RefSeq	ILMN_201541	ILMN_201541	RAET1C	NM_009018.1	NM_009018.1		19370	6679620	NM_009018.1	Raet1c	NP_033044.1	ILMN_1239542	006960162	S	222	CCTACCCCAGCAGATCCTCTCTGGTATGAAGCGAAGTGCTTAGTGGATGA	10	+	21870072-21870121		Mus musculus retinoic acid early transcript gamma (Raet1c), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]	RAE-1gamma	RAE-1gamma
Mus musculus	RefSeq	ILMN_201541	ILMN_201541	RAET1C	NM_009018.1	NM_009018.1		19370	6679620	NM_009018.1	Raet1c	NP_033044.1	ILMN_1227802	002100692	S	613	ACGATGATGGGGACCTTGTGCAACGATTGAAATACTTCATACCCGAATGC	10	+	21870715-21870764		Mus musculus retinoic acid early transcript gamma (Raet1c), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]	RAE-1gamma	RAE-1gamma
Mus musculus	RefSeq	ILMN_210899	ILMN_210899	CD109	NM_153098.2	NM_153098.2		235505	34328375	NM_153098.2	Cd109	NP_694738.1	ILMN_1214571	000360445	S	4392	CTCGTCTTTTGCTCCGTCCTTCTGTACTTTGTGCAACATTGATTATGATT	9	+	78562823-78562865:78562866-78562872	9qE1	Mus musculus CD109 antigen (Cd109), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA];  [goid 17114] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9930012E15Rik; GARP; AI480638	9930012E15Rik; GARP; AI480638
Mus musculus	RefSeq	ILMN_210899	ILMN_210899	CD109	NM_153098.2	NM_153098.2		235505	34328375	NM_153098.2	Cd109	NP_694738.1	ILMN_2641229	000630689	S	5378	GTCTGGGTATTGGGCTGTATGGCGCCCAGTGATGCTGTAAGTCATTAAGA	9	+	78563809-78563858	9qE1	Mus musculus CD109 antigen (Cd109), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA];  [goid 17114] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9930012E15Rik; GARP; AI480638	9930012E15Rik; GARP; AI480638
Mus musculus	RefSeq	ILMN_210899	ILMN_210899	CD109	NM_153098.2	NM_153098.2		235505	34328375	NM_153098.2	Cd109	NP_694738.1	ILMN_1246100	003460575	S	449	CTCCAACAGGACACGTTTAACATTTGAGAGCAAGAGTATATCTGTCCTCA	9	+	78484326-78484375	9qE1	Mus musculus CD109 antigen (Cd109), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA];  [goid 17114] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9930012E15Rik; GARP; AI480638	9930012E15Rik; GARP; AI480638
Mus musculus	MEEBO	ILMN_185758	ILMN_185758	ZFP313	scl0003317.1_1	NM_030743.3			27477064	NM_030743.3	Zfp313		ILMN_2429754	003890687	S	1	AATGTCTGAAGCCGAAGAAACCTGTCTGTGGGGTGTGTCGCAGCGCTCTG										
Mus musculus	MEEBO	ILMN_195520	ILMN_195520	COL11A2	scl0001622.1_78				704453	D38412	col11a2		ILMN_1222218	001690739	S	19	TACACCTATGGCTATGGGGATGATTATCGTGAGGAGACCGAGCTTGGCCC										
Mus musculus	RefSeq	ILMN_194025	ILMN_237874	RPS24	NM_207634.1	NM_207634.1		20088	46519157	NM_207634.1	Rps24	NP_997517.1	ILMN_2625060	005490446	S	704	CTACATGGGCAAAGTGTAGGACCAATTACCCTGTTAGCATCGTCTTTGCT	14	+	25315235-25315284	14qA3	Mus musculus ribosomal protein S24 (Rps24), transcript variant 2, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISO]	MGC107549	MGC107549
Mus musculus	RefSeq	ILMN_218621	ILMN_218621	DMRT2	NM_145831.3	NM_145831.3		226049	146149265	NM_145831.3	Dmrt2	NP_665830.1	ILMN_1227296	006770161	S	2280	GGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTC				19qC1	Mus musculus doublesex and mab-3 related transcription factor 2 (Dmrt2), mRNA.				Terra	Terra
Mus musculus	RefSeq	ILMN_240603	ILMN_240603	RFX4	NM_001024918.1	NM_001024918.1		71137	67906190	NM_001024918.1	Rfx4	NP_001020089.1	ILMN_3017680	005490348	I	738	GATCATAAGGCAGCAGTTTCCTCAGCTAACCACCAGAAGACTCGGGACCC	10	+	84277504-84277504:84298038-84298086	10qC1	Mus musculus regulatory factor X, 4 (influences HLA class II expression) (Rfx4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IMP]; The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input [goid 21516] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	NYD-sp10; 4933412G19Rik	NYD-sp10; 4933412G19Rik
Mus musculus	RefSeq	ILMN_240603	ILMN_240603	RFX4	NM_001024918.1	NM_001024918.1		71137	67906190	NM_001024918.1	Rfx4	NP_001020089.1	ILMN_3089352	003290170	A	3418	GGCACTAAACACTGTCCTCCACTGTGTTACTTTGCGAAGCTGGATGGAGC	10	+	84368759-84368808	10qC1	Mus musculus regulatory factor X, 4 (influences HLA class II expression) (Rfx4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IMP]; The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input [goid 21516] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	NYD-sp10; 4933412G19Rik	NYD-sp10; 4933412G19Rik
Mus musculus	RefSeq	ILMN_197139	ILMN_247172	LOC674334	XM_973798.1	XM_973798.1		674334	94363504	XM_973798.1	LOC674334	XP_978892.1	ILMN_1217377	005390563	S	8592	CTCCATCAAACATGCACTTTCAATTCCACCCAGAAGAGGAGGACCCAAGA					PREDICTED: Mus musculus similar to hCG2011852 (LOC674334), mRNA.					
Mus musculus	Riken	ILMN_206493	ILMN_206493	D430043M02RIK	ri|D430043M02|PX00195H14|AK085147|3800					AK085147	D430043M02Rik		ILMN_1257561	003420431	S	3484	GCTTGCTGAGTGTGAGTACGTGAAGGTGCAAGGAGCCTATGTGGAGAGGC										
Mus musculus	RefSeq	ILMN_193571	ILMN_193571	ZFP207	NM_011751.2	NM_011751.2		22680	142361088	NM_011751.2	Zfp207	NP_035881.1	ILMN_2498416	002140647	S	1316	CCAATGCCACCTCATGGTCAGTATGGTGGTCATCATCAAGGCATGCCAGG	11	+	80208748-80208763:80208892-80208925	11qB5	Mus musculus zinc finger protein 207 (Zfp207), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			8430401D15Rik; Zep	8430401D15Rik; Zep
Mus musculus	Riken	ILMN_203692	ILMN_203692	9630005B22RIK	ri|9630005B22|PX00114P06|AK035797|3399					AK035797	9630005B22Rik		ILMN_1256155	000380347	S	2935	TAGGGCTGGCCTTGAACCTGATCCCCCTGCTTCGACTGCTAGGCTTCTAG										
Mus musculus	RefSeq	ILMN_197527	ILMN_197527	LOC277136	XM_204822.1	XM_204822.1			25030159	XM_204822.1	LOC277136		ILMN_1234006	001030356	S	141	CTACTCAGCCTCAGGGTACCCAACCCTGTTCTGGTATGTGCAGTATCCCG										
Mus musculus	RefSeq	ILMN_242377	ILMN_242377	BCLAF1	NM_001025393.1	NM_001025393.1		72567	70906448	NM_001025393.1	Bclaf1	NP_001020564.1	ILMN_3096361	001780253	A	5217	GATGGCTAAAGGACTCTTCCTCAGTGTGGTGTATATTTCAACAGGGACCC	10	+	20062217-20062266	10qA3	Mus musculus BCL2-associated transcription factor 1 (Bclaf1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISO]	2610102K23Rik; 5730534O06Rik; 2700025J07Rik; MGC30519; 2810454G14Rik; AI450190; AW556225; Btf; mKIAA0164; MGC58035; KIAA0164	2610102K23Rik; 5730534O06Rik; 2700025J07Rik; MGC30519; 2810454G14Rik; AI450190; AW556225; Btf; mKIAA0164; MGC58035; KIAA0164
Mus musculus	Riken	ILMN_201710	ILMN_201710	2310036I02RIK	ri|2310036I02|ZX00039H14|AK009650|1035					AK009650	2310036I02Rik		ILMN_1235858	000940402	S	801	TCCCTTGCATTGCATTAGATATGTACACTGGGGACTGTGGGGTGTGGCGC										
Mus musculus	RefSeq	ILMN_219990	ILMN_219990	CHGA	NM_007693.1	NM_007693.1		12652	6680931	NM_007693.1	Chga	NP_031719.1	ILMN_2814927	002510632	S	1593	TGCTCGAGTAGGGCTGCTTCCAGCCACAGAGCCCAGGTTACCCCCTTTGC	12	+	103802948-103802997	12qE	Mus musculus chromogranin A (Chga), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219990	ILMN_219990	CHGA	NM_007693.1	NM_007693.1		12652	6680931	NM_007693.1	Chga	NP_031719.1	ILMN_2716146	004760747	S	1374	GAGGCCATCTTCCAGAGAAGACAGTGTGGAGGCCCGAAGTGACTTTGAGG	12	+	103801193-103801242	12qE	Mus musculus chromogranin A (Chga), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219990	ILMN_219990	CHGA	NM_007693.1	NM_007693.1		12652	6680931	NM_007693.1	Chga	NP_031719.1	ILMN_2723763	007610646	S	622	TCTGACAAGGGACAACAGGATGGCTTTGAGGCAACCACAGAGGGACCTAG	12	+	103799927-103799976	12qE	Mus musculus chromogranin A (Chga), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222024	ILMN_222024	PROS1	NM_011173.2	NM_011173.2		19128	110625652	NM_011173.2	Pros1	NP_035303.1	ILMN_1235499	004670372	S	2832	CTCAACCTAAGCTGCTGAGAGCACACAAGGTCAGAGTCAGAATGGCGGCC	16	+	62928728-62928777	16qC1.3	Mus musculus protein S (alpha) (Pros1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AW214361	AW214361
Mus musculus	MEEBO	ILMN_186860	ILMN_186860	SCL000260.1_64	scl000260.1_64	AK083340.1			26350468	AK083340.1	scl000260.1_64		ILMN_2439114	001980176	S	16	GCTCTCATGCAAATGTGCCTTCTTAGTAGAAGGCCTGGACTCGCTCCTCC										
Mus musculus	Riken	ILMN_204935	ILMN_204935	D230005E09RIK	ri|D230005E09|PX00188G01|AK051822|1438					AK051822	D230005E09Rik		ILMN_1223011	006220653	S	1166	GCGCCACATCGGAGACATACACAGCATAGTAACCATTTCAACCACCCACC										
Mus musculus	Riken	ILMN_206515	ILMN_206515	D830035P19RIK	ri|D830035P19|PX00199B09|AK085971|3738					AK085971	D830035P19Rik		ILMN_1219958	002000630	S	3358	GGGACCGGGGCTGTAGAGTTCTAGCACACATGCATTAATTGACTCCTCGC										
Mus musculus	MEEBO	ILMN_223879	ILMN_223879	BLVRB	scl32898.7.1_80				31981739	NM_144923	Blvrb		ILMN_2770917	001440717	S	758	CTAGCACTCTGACCTAGGTGGGGAGGGTCATGCATCCTGAGAAATGACAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: bilirubin + NAD(P)+ = biliverdin + NAD(P)H + H+ [goid 4074] [evidence IEA]; Catalysis of the reaction: reduced riboflavin + NADP+ = riboflavin + NADPH + H+ [goid 42602] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219752	ILMN_219752	ACCN4	NM_183022.3	NM_183022.3		241118	145864488	NM_183022.3	Accn4	NP_898843.1	ILMN_1250793	005360184	S	1956	GGGGAAAGTACCCATGAAACTGGGCCTCTACGCTGACCCCACACATCTCC				1qC4	Mus musculus amiloride-sensitive cation channel 4, pituitary (Accn4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Asic4; BNAC4	Asic4; BNAC4
Mus musculus	MEEBO	ILMN_194168	ILMN_194168	OMG	scl39866.2_254				9506940	NM_019409	Omg		ILMN_1248920	000630328	S	1	CTGGCTGTGTCACGTGGTCTCTAGACATTATCACAGCTTTTGCTGTAGGG						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_204213	ILMN_204213	KIF5C	ri|A730049O10|PX00150F10|AK043041|1763					AK043041	Kif5c		ILMN_1244136	002940731	S	1365	CAGGTGTGCTCACATGTATGTGCACATGTGGAGACCAAAGGCTGGCTTTG						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence TAS]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence ISS]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence TAS]		
Mus musculus	RefSeq	ILMN_209754	ILMN_209754	PRODH2	NM_019546.4	NM_019546.4		56189	31981531	NM_019546.4	Prodh2	NP_062419.2	ILMN_1252471	006370703	S	1157	TCCTCTGGATGGGCCTGTCTGTTTTGGACAACTTCTGGGCATGTGTGACC	7	+	30219916-30219965	7qB1	Mus musculus proline dehydrogenase (oxidase) 2 (Prodh2), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6560] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid [goid 6537] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6562] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-proline + acceptor = (S)-1-pyrroline-5-carboxylate + reduced acceptor [goid 4657] [evidence IEA]	MmPOX1; 2510038B11Rik; 2510028N04Rik; MmPOX; POX1	MmPOX1; 2510038B11Rik; 2510028N04Rik; MmPOX; POX1
Mus musculus	RefSeq	ILMN_209754	ILMN_209754	PRODH2	NM_019546.4	NM_019546.4		56189	31981531	NM_019546.4	Prodh2	NP_062419.2	ILMN_2844829	002140364	S	1388	GGACGGCCTAAGATGTCTCCATCAGCACCATCAGGGGCCATGTGCTCAAT	7	+	30221733-30221742:30221743-30221782	7qB1	Mus musculus proline dehydrogenase (oxidase) 2 (Prodh2), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6560] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid [goid 6537] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6562] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-proline + acceptor = (S)-1-pyrroline-5-carboxylate + reduced acceptor [goid 4657] [evidence IEA]	MmPOX1; 2510038B11Rik; 2510028N04Rik; MmPOX; POX1	MmPOX1; 2510038B11Rik; 2510028N04Rik; MmPOX; POX1
Mus musculus	RefSeq	ILMN_222139	ILMN_222139	OLFR339	NM_146949.1	NM_146949.1		258951	22129016	NM_146949.1	Olfr339	NP_667160.1	ILMN_2986122	004210524	S	441	ATCATGGGCCTTATCTTTAACCAATGCTCTTGCGCACACCCTTCTCTTGG	2	+	36277360-36277409	2qB	Mus musculus olfactory receptor 339 (Olfr339), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR136-3	MOR136-3
Mus musculus	Riken	ILMN_205359	ILMN_205359	PPM1D	ri|D030023K16|PX00179P12|AK050831|1205					AK050831	Ppm1d		ILMN_1237129	001030709	S	690	GGATGCGAGTGAAGACTGTCATGGTTGGAGTTCTAGGCACACCGAGTGGC						A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the removal of a serine- or threonine-bound phosphate group from a protein; action dependent on magnesium [goid 4724] [evidence ISS]		
Mus musculus	RefSeq	ILMN_254925	ILMN_254925	DDI2	NM_001017966.2	NM_001017966.2		68817	77404398	NM_001017966.2	Ddi2	NP_001017966.1	ILMN_2998995	006420189	S	1327	ACCGGGCGAGAGGACATACGGCCAGAGGAAATTGCAGACCAAGAATTAGC	4	-	141248201-141248250	4qE1	Mus musculus DNA-damage inducible protein 2 (Ddi2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	AI604911; 1110056G13Rik; AU040698; 1700027M01Rik; 9130022E05Rik	AI604911; 1110056G13Rik; AU040698; 1700027M01Rik; 9130022E05Rik
Mus musculus	RefSeq	ILMN_212565	ILMN_212565	ARL5B	NM_029466.2	NM_029466.2		75869	31541979	NM_029466.2	Arl5b	NP_083742.2	ILMN_2988191	004490075	S	3398	CACGTCAACAGGGATGAGATGGAGGGGAGTGGCTATGTTTCACATTCTCC	2	+	14996749-14996798	2qA2	Mus musculus ADP-ribosylation factor-like 5B (Arl5b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AW146430; Arl8; 4930587A11Rik	AW146430; Arl8; 4930587A11Rik
Mus musculus	Riken	ILMN_205819	ILMN_205819	A430068O14RIK	ri|A430068O14|PX00137F23|AK040132|3151					AK040132	A430068O14Rik		ILMN_1217386	007100026	S	3057	CAGGTGCCCATGTAGCCAAAACTGAGGAAGAGGGTACAGCCAGCAGGACT										
Mus musculus	RefSeq	ILMN_229734	ILMN_229734	SEL1L2	NM_001033296.1	NM_001033296.1		228684	85701795	NM_001033296.1	Sel1l2	NP_001028468.1	ILMN_2938851	006480279	S	1510	CCACTGGGCTGAGAAATTCCTAACGGCCTATTTCGCCTATAAGGATGGGG	2	-	139935629-139935678	2qF3	Mus musculus sel-1 suppressor of lin-12-like 2 (C. elegans) (Sel1l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Gm118	Gm118
Mus musculus	RefSeq	ILMN_219416	ILMN_219416	DET1	NM_029585.3	NM_029585.3		76375	118130619	NM_029585.3	Det1	NP_083861.1	ILMN_2708546	001470598	S	1596	CTGGCTTGCTGAAGTTTGAGATCCAGGCGGGCTTGCTGGGCCGCCCCATC	7	-	85972931-85972980	7qD3	Mus musculus de-etiolated homolog 1 (Arabidopsis) (Det1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		2610034H20Rik	2610034H20Rik
Mus musculus	Riken	ILMN_206464	ILMN_206464	SOX6	ri|D230018G03|PX00188B23|AK084290|2257					AK084290	Sox6		ILMN_1252898	004070386	S	1889	GGCCAGAGGACGCAGAAGGTGAGTGGCTTTTCCCTAGGTTATGTTTCTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual [goid 35051] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]; Any mechanism, at the level of transcription or post-transcription, causing long-term gene inactivation [goid 16458] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213448	ILMN_213448	IRF2BP1	NM_178757.3	NM_178757.3		272359	32129220	NM_178757.3	Irf2bp1	NP_848872.2	ILMN_1228568	006520577	S	2617	CCACTAGGTGGTGCCTTTTGTCCAGTGGGCTGCTGTTTGTAGTAGTGTAC	7	+	19592030-19592079	7qA3	Mus musculus interferon regulatory factor 2 binding protein 1 (Irf2bp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISA]	C530033F24; 6330414O09Rik	C530033F24; 6330414O09Rik
Mus musculus	Riken	ILMN_205777	ILMN_205777	D230010O12RIK	ri|D230010O12|PX00187D10|AK051853|2396					AK051853	D230010O12Rik		ILMN_2575150	004570450	S	2205	TTCAGATGACTCAGTGCTGTGCTTCATGCCTGACTGCCTTCTCTAGAGGG										
Mus musculus	RefSeq	ILMN_204850	ILMN_209392	COG8	NM_139229.3	NM_139229.3		97484	66392580	NM_139229.3	Cog8	NP_631975.3	ILMN_2568092	004860291	S	1765	GGGCCACGAGGTCCGGCCCCAGCTCCTGCTCATCTAAACAGAAAACTGTT	8	-	109572834-109572883	8qD3	Mus musculus component of oligomeric golgi complex 8 (Cog8), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		C87832	C87832
Mus musculus	RefSeq	ILMN_214646	ILMN_214646	CD59A	NM_007652.2	NM_007652.2		12509	31982468	NM_007652.2	Cd59a	NP_031678.1	ILMN_1228942	001440019	S	1524	GCGGCCACAACTTGGATGTCCCACATCTCTGAATATTGCCTGGGCTCTGC	2	+	103916078-103916127	2qE2	Mus musculus CD59a antigen (Cd59a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			protectin; AA987121; Cd59	protectin; AA987121; Cd59
Mus musculus	RefSeq	ILMN_224762	ILMN_224762	RNASEN	NM_026799.2	NM_026799.2		14000	54873614	NM_026799.2	Rnasen	NP_081075.2	ILMN_3066222	005360647	I	3918	CTTTCCCCAGATGGCCCATCAGAAGCGGTTCATTGAGCGGAAATACAGAC	15	+	12864751-12864800	15qA1	Mus musculus ribonuclease III, nuclear (Rnasen), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt [goid 4525] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rn3; Etohi2; 1110013A17Rik; MGC115770; AI874853	Rn3; Etohi2; 1110013A17Rik; MGC115770; AI874853
Mus musculus	RefSeq	ILMN_224762	ILMN_224762	RNASEN	NM_026799.2	NM_026799.2		14000	54873614	NM_026799.2	Rnasen	NP_081075.2	ILMN_3144358	003290689	A	3717	GCAGTGTTGTCTGACCCTGAGGACAGAAGGGAAAGAGCCTGACATCCCCT	15	+	12856008-12856057	15qA1	Mus musculus ribonuclease III, nuclear (Rnasen), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt [goid 4525] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rn3; Etohi2; 1110013A17Rik; MGC115770; AI874853	Rn3; Etohi2; 1110013A17Rik; MGC115770; AI874853
Mus musculus	RefSeq	ILMN_215358	ILMN_215358	SDCCAG8	NM_029756.2	NM_029756.2		76816	134031983	NM_029756.2	Sdccag8	NP_084032.1	ILMN_1223610	003990646	S	2551	GAACAGCTTCAAGTCACTGATTTACGTTGTCTCTAAAGTATACACATGGA	1	+	178950495-178950544	1qH4	Mus musculus serologically defined colon cancer antigen 8 (Sdccag8), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]			Cccap; 2700048G21Rik; 5730470G24Rik	Cccap; 2700048G21Rik; 5730470G24Rik
Mus musculus	RefSeq	ILMN_220724	ILMN_220724	ARHGEF1	NM_008488.1	NM_008488.1		16801	6678667	NM_008488.1	Arhgef1	NP_032514.1	ILMN_2748138	004230088	S	321	TGCATGCAGACATGCTGAGCTCTCTGGGCCCCAAAGAAGCCAAGAAGGCC	7	+	25697086-25697135	7qA3	Mus musculus Rho guanine nucleotide exchange factor (GEF) 1 (Arhgef1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Lsc; Lbcl2	Lsc; Lbcl2
Mus musculus	RefSeq	ILMN_220724	ILMN_220724	ARHGEF1	NM_008488.1	NM_008488.1		16801	6678667	NM_008488.1	Arhgef1	NP_032514.1	ILMN_2920752	005340754	S	3034	TCAGGGCTTCACTCCCAGAGCACCCCCTTAATCCCCACTTTTCAGGCCGT	7	+	25711452-25711501	7qA3	Mus musculus Rho guanine nucleotide exchange factor (GEF) 1 (Arhgef1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Lsc; Lbcl2	Lsc; Lbcl2
Mus musculus	RefSeq	ILMN_220724	ILMN_220724	ARHGEF1	NM_008488.1	NM_008488.1		16801	6678667	NM_008488.1	Arhgef1	NP_032514.1	ILMN_2920753	004210563	S	2907	ACAGCATCTCACACCCCAGAGGCCTGGAGCAGAGGGAGATTGGCTGAACT	7	+	25711325-25711374	7qA3	Mus musculus Rho guanine nucleotide exchange factor (GEF) 1 (Arhgef1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Lsc; Lbcl2	Lsc; Lbcl2
Mus musculus	RefSeq	ILMN_219764	ILMN_219764	CABP4	NM_144532.2	NM_144532.2		73660	31982570	NM_144532.2	Cabp4	NP_653115.1	ILMN_2713354	006040653	S	630	AAGCTGAGGGAGGAGACAGCTCACATGCTGGGCGTTCGGGAGCTACGCAT	19	-	4137119-4137168	19qA	Mus musculus calcium binding protein 4 (Cabp4), mRNA.	A motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope [goid 9288] [evidence IEA]	Cell motility due to movement of cilia or flagella [goid 1539] [evidence IEA]; Morphogenesis of photoreceptors, sensory cells that react to the presence of light [goid 8594] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina [goid 60040] [evidence IMP]; Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision [goid 46549] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	2410038D05Rik	2410038D05Rik
Mus musculus	RefSeq	ILMN_219764	ILMN_219764	CABP4	NM_144532.2	NM_144532.2		73660	31982570	NM_144532.2	Cabp4	NP_653115.1	ILMN_2713353	002510551	S	628	AAAGCTGAGGGAGGAGACAGCTCACATGCTGGGCGTTCGGGAGCTACGCA	19	-	4137121-4137170	19qA	Mus musculus calcium binding protein 4 (Cabp4), mRNA.	A motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope [goid 9288] [evidence IEA]	Cell motility due to movement of cilia or flagella [goid 1539] [evidence IEA]; Morphogenesis of photoreceptors, sensory cells that react to the presence of light [goid 8594] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina [goid 60040] [evidence IMP]; Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision [goid 46549] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	2410038D05Rik	2410038D05Rik
Mus musculus	MEEBO	ILMN_213776	ILMN_213776	BC064033	scl29154.3_539				27734065	NM_173375	BC064033		ILMN_2771760	006840437	S	1286	CACCCATGCCCTATCATTTCAATGTAGAAGCCAGGCTAAAGCATAGTGCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_190784	ILMN_239472	CCDC6	XM_618775.3	XM_618775.3		76551	94388259	XM_618775.3	Ccdc6	XP_618775.2	ILMN_1236934	006550022	S	5210	TGGGACTTTGTTTGGAAAGAAAGCCGACTGTAACTTGGGCAGATGTCGAC	10	+	69655647-69655696	10qB5.3	PREDICTED: Mus musculus coiled-coil domain containing 6, transcript variant 1 (Ccdc6), mRNA.					
Mus musculus	Riken	ILMN_203938	ILMN_203938	PTPRM	ri|A330009B13|PX00130H11|AK039261|1675					AK039261	Ptprm		ILMN_1221599	005720603	S	1448	CTCTGAGGTCTCCACTGGTAGGAAGGATTTGCTGCATGTGGCGGGTAGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212379	ILMN_212379	HP1BP3	NM_010470.1	NM_010470.1		15441	33468902	NM_010470.1	Hp1bp3	NP_034600.1	ILMN_1223353	002060128	S	3144	CGTGAGTCACTGGGATTTGTGTTGCATGGAAGGCAGTCTTTCCTGTTGTA	4	+	137798953-137799002	4qD3	Mus musculus heterochromatin protein 1, binding protein 3 (Hp1bp3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC28927; Hp1bp74	MGC28927; Hp1bp74
Mus musculus	RefSeq	ILMN_240725	ILMN_240725	GAN	NM_001081151.1	NM_001081151.1		209239	124487230	NM_001081151.1	Gan	NP_001074620.1	ILMN_3091801	002900112	A	1660	TGGCACCACACAAAGCCACTCCTGCCATCTGACCTTCGGCGCACAGGCTG	8	+	119728094-119728143	8qE1	Mus musculus giant axonal neuropathy (Gan), mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence ISO]		gigaxonin; A330045G18	gigaxonin; A330045G18
Mus musculus	RefSeq	ILMN_212858	ILMN_212858	KTN1	NM_008477.2	NM_008477.2		16709	144922637	NM_008477.2	Ktn1	NP_032503.2	ILMN_2700224	005360110	S	3070	GGAAGCAATGGAAGCTTTGGCATCAACTGAAAAAATGCTGCAGGACAGAG	14	+	48336569-48336618	14qC1	Mus musculus kinectin 1 (Ktn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence TAS]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence TAS]		
Mus musculus	RefSeq	ILMN_212858	ILMN_212858	KTN1	NM_008477.2	NM_008477.2		16709	144922637	NM_008477.2	Ktn1	NP_032503.2	ILMN_2631067	006220672	S	3663	CTGAGTTGCAGAAAAAGCTTGATGATTCATATTCTGAAGCAGTAAGACAG	14	+	48346162-48346211	14qC1	Mus musculus kinectin 1 (Ktn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence TAS]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence TAS]		
Mus musculus	RefSeq	ILMN_214962	ILMN_214962	ARPC1A	NM_019767.2	NM_019767.2		56443	118130576	NM_019767.2	Arpc1a	NP_062741.1	ILMN_2699700	002230681	S	549	AAGCCGATCCGCTCCACAGTCCTCAGCTTGGACTGGCATCCCAACAATGT	5	+	145858107-145858156	5qG2	Mus musculus actin related protein 2/3 complex, subunit 1A (Arpc1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	1110030K07Rik; Sid329; 41kDa; 0610010H08Rik; AA407347; Sid32	1110030K07Rik; Sid329; 41kDa; 0610010H08Rik; AA407347; Sid32
Mus musculus	RefSeq	ILMN_214962	ILMN_214962	ARPC1A	NM_019767.2	NM_019767.2		56443	118130576	NM_019767.2	Arpc1a	NP_062741.1	ILMN_1220452	002120053	S	797	GGTCAGCCACGACAGCACAGTGTCTGTTGCTGATGCCTCAAAAAGTGTGC	5	+	145862088-145862137	5qG2	Mus musculus actin related protein 2/3 complex, subunit 1A (Arpc1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	1110030K07Rik; Sid329; 41kDa; 0610010H08Rik; AA407347; Sid32	1110030K07Rik; Sid329; 41kDa; 0610010H08Rik; AA407347; Sid32
Mus musculus	RefSeq	ILMN_214962	ILMN_214962	ARPC1A	NM_019767.2	NM_019767.2		56443	118130576	NM_019767.2	Arpc1a	NP_062741.1	ILMN_2753649	006220202	S	1015	AGCGCAACATGTCTGCTATGGAACGTTTCCGTAACATGGACAAGAGGGCC	5	+	145865658-145865707	5qG2	Mus musculus actin related protein 2/3 complex, subunit 1A (Arpc1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	1110030K07Rik; Sid329; 41kDa; 0610010H08Rik; AA407347; Sid32	1110030K07Rik; Sid329; 41kDa; 0610010H08Rik; AA407347; Sid32
Mus musculus	RefSeq	ILMN_254139	ILMN_254139	NRP	NM_001013372.1	NM_001013372.1		654309	62909988	NM_001013372.1	Nrp	NP_001013390.1	ILMN_3160174	004210370	S	174	AAACTGTTGGCAGCCTCGAGATGGGGAAGATGGCGGCTGCTGTGGCTTCA	12	-	88784744-88784793	12qD2	Mus musculus neural regeneration protein (Nrp), mRNA.					
Mus musculus	RefSeq	ILMN_189811	ILMN_189811	TNFRSF21	NM_178589.3	NM_178589.3		94185	142365760	NM_178589.3	Tnfrsf21	NP_848704.1	ILMN_2464573	001010347	S	2045	CTCCTGACAGTGGAGCCCTCACCGCTGGACAAGAACAAGTGCTTCTTCGT	17	+	43222378-43222427	17qB3	Mus musculus tumor necrosis factor receptor superfamily, member 21 (Tnfrsf21), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	R74815; AA959878; TR7; DR6	R74815; AA959878; TR7; DR6
Mus musculus	Riken	ILMN_202860	ILMN_202860	4933430N04RIK	ri|4932403B02|PX00017A19|AK029924|2871					AK029924	4933430N04Rik		ILMN_1222571	004780021	S	2443	CAGAAGGAAATCTGCTAACCAACTGTCATGGGCTCTTCCCTGGACATCGG										
Mus musculus	RefSeq	ILMN_189536	ILMN_189536	VAX2	NM_011912.1	NM_011912.1		24113	6755956	NM_011912.1	Vax2	NP_036042.1	ILMN_2935579	005220196	S	129	AGATTTGCGTGCTGACACAGGTAGCGCGAGTCCGAGGGAGATTGCTGGGA	6	+	83677050-83677099	6qC3	Mus musculus ventral anterior homeobox containing gene 2 (Vax2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The establishment, maintenance and elaboration of the dorsal/ventral axis [goid 9950] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA that is assembled into chromatin [goid 31490] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC144411; MGC144412	MGC144411; MGC144412
Mus musculus	RefSeq	ILMN_215915	ILMN_215915	IHPK1	NM_013785.2	NM_013785.2		27399	40254567	NM_013785.2	Ihpk1	NP_038813.2	ILMN_2665131	006980544	S	4201	TGCTCCTCTTTCCTGGAAGCTACACACCCTAAGACCTGCGCCTGGATGCA	9	+	107950902-107950951	9qF2	Mus musculus inositol hexaphosphate kinase 1 (Ihpk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [evidence ISA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence ISA]	InsP6; AU022776; Itpk6; 1200016D08Rik	InsP6; AU022776; Itpk6; 1200016D08Rik
Mus musculus	MEEBO	ILMN_185254	ILMN_185254	CALD1	scl0001057.1_226	BC055908.1			33416541	BC055908.1	Cald1		ILMN_1254073	001340672	S	1	AAGCTGAGCAGGACAGAAAGCTAGCAGAGGAACGGGCAAGAGTCGAAGCA						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell [goid 30478] [evidence IDA]	Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]		
Mus musculus	RefSeq	ILMN_222982	ILMN_311428	LOC636952	XR_032548.1	XR_032548.1		636952	149266538	XR_032548.1	LOC636952		ILMN_1221290	005820440	S	847	GGTGTTTGTAGCATTTTTATCACACAGTAGATTCCATCCATTCACTATAC				15qB3.1	PREDICTED: Mus musculus similar to HIStone family member (his-71) (LOC636952), misc RNA.					
Mus musculus	MEEBO	ILMN_184426	ILMN_184426	NUMB	scl42256.15_169				6754911	NM_010949	Numb		ILMN_2727692	003800133	S	870	AAACGCCAGCTGTCCCTACGCATCAATGAGTTGCCTTCCACTATGCAGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_184426	ILMN_184426	NUMB	scl42256.15_169				6754911	NM_010949	Numb		ILMN_2418524	007380291	S	5	CGCAGGCTATTGTGTCGGTTTGTAATGTGGGTCTTAATGGGCTCTGTCCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_244592	ILMN_244592	DNAJB9	NM_013760.3	NM_013760.3		27362	75677543	NM_013760.3	Dnajb9	NP_038788.2	ILMN_2829636	002850326	S	1575	TGGTGTGTGTTTGTGTGTAGTCACTCTTTTGCACTTATCTTTATCTAGAG	12	-	45076423-45076472	12qB3	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 9 (Dnajb9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	AA673481; AW556981; mDj7; AA408011; Mdg1; AA673251; ERdj4	AA673481; AW556981; mDj7; AA408011; Mdg1; AA673251; ERdj4
Mus musculus	RefSeq	ILMN_197987	ILMN_197987	LOC208641	XM_156244.2	XM_156244.2			38079965	XM_156244.2	LOC208641		ILMN_1225550	000650671	S	106	CAAAAGGAAGCCAGGGAAGCCACCAGAACCCTCAACAGAGGCAGCTTTGG										
Mus musculus	Riken	ILMN_204107	ILMN_204107	CSMD1	ri|A730081J05|PX00153A23|AK043289|1321					AK043289	Csmd1		ILMN_1258693	007380288	S	614	GGAGAAAAGCTCAACGGAGACTCCAAGTTACATGAGATGCTTCCCTGGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_201837	ILMN_201837	5730478M09RIK	ri|5730478M09|PX00004D14|AK017705|1165					AK017705	5730478M09Rik		ILMN_1217316	000160661	S	207	GATTCGGCTTCCAGAACTCCGTAGCGGTATGCCAAGAAGCCTGTTTGTCC										
Mus musculus	RefSeq	ILMN_197493	ILMN_197493	LOC241962	XM_143186.2	XM_143186.2			38076262	XM_143186.2	LOC241962		ILMN_1223081	001230167	S	1857	TGTAGACCTTTCGGTGCCTCGGTGCCTCACTACTTCACCCATGATGTGGG										
Mus musculus	RefSeq	ILMN_209494	ILMN_209494	KCNJ1	NM_019659.2	NM_019659.2		56379	31543034	NM_019659.2	Kcnj1	NP_062633.1	ILMN_2924677	000840768	S	2803	AGGTATGAAGGAGAAAGGAACGAGATACAGCACCACAGTCAGGATGCTGC	9	+	32206510-32206559	9qA4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 1 (Kcnj1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5242] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ROMK-2; Romk2; Kir1.1; ROMK	ROMK-2; Romk2; Kir1.1; ROMK
Mus musculus	RefSeq	ILMN_209494	ILMN_209494	KCNJ1	NM_019659.2	NM_019659.2		56379	31543034	NM_019659.2	Kcnj1	NP_062633.1	ILMN_2770631	001050376	S	2732	CCTGGAGTGTGTATGATGCTAACACCGAATGGTTCTTGTGTTTCTCTGCC	9	+	32206439-32206488	9qA4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 1 (Kcnj1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5242] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ROMK-2; Romk2; Kir1.1; ROMK	ROMK-2; Romk2; Kir1.1; ROMK
Mus musculus	RefSeq	ILMN_209494	ILMN_209494	KCNJ1	NM_019659.2	NM_019659.2		56379	31543034	NM_019659.2	Kcnj1	NP_062633.1	ILMN_1257879	003060133	S	133	CAGCACCACTCACTTGCTTTGCCCAGCATGGATGCTTCAGATCGGAGGTG	9	+	32201702-32201751	9qA4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 1 (Kcnj1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5242] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ROMK-2; Romk2; Kir1.1; ROMK	ROMK-2; Romk2; Kir1.1; ROMK
Mus musculus	MEEBO	ILMN_184444	ILMN_184444	CRK	scl41256.5_292				31559994	NM_133656	Crk		ILMN_2652663	003710161	S	776	ATGCCCAACCCAGCGTCAACACTCCGCTCCCTAACCTCCAGAATGGGCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a phosphorylated amino acid residue within a protein [goid 45309] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213610	ILMN_213610	D330027H18RIK	XM_149840.5	XM_149840.5		101359	94377092	XM_149840.5	D330027H18Rik	XP_149840.2	ILMN_2638914	004590592	S	3326	GGAGCTGTGGCCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTT	6	-	29119267-29119316	6qA3.3	PREDICTED: Mus musculus RIKEN cDNA D330027H18 gene (D330027H18Rik), mRNA.					
Mus musculus	MEEBO	ILMN_188611	ILMN_188611	E430013K19RIK	scl54969.1.1_276						E430013K19Rik		ILMN_2454172	005960356	S	16	CCATTCCCCTCAAGTTCTAGATTGCAGCAGTCCCATGCTCAAGCAGACAC										
Mus musculus	MEEBO	ILMN_191626	ILMN_191626	RBBP6	scl32089.1_89				23956061	NM_011247	Rbbp6		ILMN_2638337	007000373	S	4793	CCAAAAAGTGAGATCTGTCACTGTGTGAAGGACGGATGTGTTAATTGACT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191626	ILMN_191626	RBBP6	scl32089.1_89				23956061	NM_011247	Rbbp6		ILMN_2638336	000450307	S	4792	ACCAAAAAGTGAGATCTGTCACTGTGTGAAGGACGGATGTGTTAATTGAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188862	ILMN_188862	1810015C11RIK	scl0069102.1_328						1810015C11Rik		ILMN_2456401	001500273	S	9	CCTTGTTCAGCCATATGCACTCACCCTGCCTCTCTTGTTTATATAATAAA										
Mus musculus	RefSeq	ILMN_223966	ILMN_235027	IFT52	NM_172150.4	NM_172150.4		245866	146149277	NM_172150.4	Ift52	NP_742162.2	ILMN_2772389	005290725	S	1455	CGAGAATGGAACTTCTGTTCTAGCTGGAGGGTCCCCACAAACAGTAGCGT				2qH2	Mus musculus intraflagellar transport 52 homolog (Chlamydomonas) (Ift52), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45862] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	NGD5; MGC47065; RP23-335N12.4; BC037708	NGD5; MGC47065; RP23-335N12.4; BC037708
Mus musculus	MEEBO	ILMN_196167	ILMN_196167	1700038P13RIK	scl50472.1.2793_41						1700038P13Rik		ILMN_2522224	006580014	S	10	GATCGCAGCCAACTGGTCGACCCCCACTCACTCAGCTTGTTTCCCAAACT										
Mus musculus	RefSeq	ILMN_221077	ILMN_322785	SHB	XM_001474892.1	XM_001474892.1		230126	149252376	XM_001474892.1	Shb	XP_001474942.1	ILMN_1216600	003870326	S	2380	CTCTGTAACCGTTAGATGTCAAGGAACAATTGTGCAGACAAAGAGGATGC	4	-	45436200-45436249	4qB1	PREDICTED: Mus musculus src homology 2 domain-containing transforming protein B (Shb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence TAS]		
Mus musculus	MEEBO	ILMN_224058	ILMN_224058	GLIPR2	scl0384009.6_207				47087148	NM_027450	Glipr2		ILMN_2773900	004120687	S	1829	CCAGAGGTTCAATTGTGGATCCCTGAAATGGTGGTATCCCCTCCTGCAAG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_210868	ILMN_210868	1300013J15RIK	NM_026183.2	NM_026183.2		67473	27229043	NM_026183.2	1300013J15Rik	NP_080459.1	ILMN_2849016	006520022	S	2835	CTGCCACTGTCAAACATGCACTGCTGTCTACTGTCTTCATTCCGGGCTGG	11	-	61159699-61159748	11qB2	Mus musculus RIKEN cDNA 1300013J15 gene (1300013J15Rik), mRNA.				RP23-451A6.3; AI036982	RP23-451A6.3; AI036982
Mus musculus	RefSeq	ILMN_210868	ILMN_210868	1300013J15RIK	NM_026183.2	NM_026183.2		67473	27229043	NM_026183.2	1300013J15Rik	NP_080459.1	ILMN_2749842	002030278	S	1733	CACGTGCTTCCTGGCTTTTATTGCTCGGCTCAATTGGAAACGCGCCTGTC	11	-	61165644-61165693	11qB2	Mus musculus RIKEN cDNA 1300013J15 gene (1300013J15Rik), mRNA.				RP23-451A6.3; AI036982	RP23-451A6.3; AI036982
Mus musculus	RefSeq	ILMN_215832	ILMN_319033	LOC100043347	XM_001480344.1	XM_001480344.1		100043347	149234340	XM_001480344.1	LOC100043347	XP_001480394.1	ILMN_1220565	005550725	S	392	GGACCTTAGGGTGCCAGATTTTACCCCTATACAATAATCGGGGCTACAGG	1	-	155626551-155626600	1qG3	PREDICTED: Mus musculus hypothetical protein LOC100043347 (LOC100043347), mRNA.					
Mus musculus	RefSeq	ILMN_192395	ILMN_239194	TEAD4	NM_001080979.1	NM_001080979.1		21679	124430567	NM_001080979.1	Tead4	NP_001074448.2	ILMN_2599986	006290544	S	1610	GGTGGTCACCAACCGAGACACACAGGAGACCTTGCTGTGTATTGCATATG	6	-	128178448-128178497	6qF3	Mus musculus TEA domain family member 4 (Tead4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]; The cell fate commitment of precursor cells that will become trophectoderm cells [goid 1830] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IGI]	ETFR-2a; TEF-3; TEAD-4; ETFR-2; Tefr1; Tefr1a; FR-19; Tcf13r1	ETFR-2a; TEF-3; TEAD-4; ETFR-2; Tefr1; Tefr1a; FR-19; Tcf13r1
Mus musculus	RefSeq	ILMN_239194	ILMN_239194	TEAD4	NM_001080979.1	NM_001080979.1		21679	124430567	NM_001080979.1	Tead4	NP_001074448.2	ILMN_3157399	003940189	A	2734	AGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGACAAGGGCTCTGGAG	6	-	128177324-128177373	6qF3	Mus musculus TEA domain family member 4 (Tead4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]; The cell fate commitment of precursor cells that will become trophectoderm cells [goid 1830] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IGI]	ETFR-2a; TEF-3; TEAD-4; ETFR-2; Tefr1; Tefr1a; FR-19; Tcf13r1	ETFR-2a; TEF-3; TEAD-4; ETFR-2; Tefr1; Tefr1a; FR-19; Tcf13r1
Mus musculus	Riken	ILMN_204524	ILMN_204524	B230363H02RIK	ri|B230363H02|PX00161A07|AK046269|2213					AK046269	B230363H02Rik		ILMN_1219935	004860747	S	2034	CTTCCATGAAAATCCAGGAATGGGTGTGTGGTGGCATGTGCCTGTCACTC										
Mus musculus	Riken	ILMN_204591	ILMN_204591	C130042E02RIK	ri|C130042E02|PX00169I09|AK048237|1606					AK048237	C130042E02Rik		ILMN_1241983	007570725	S	1357	TCGGAGTGGTTTGGGCCCTTGCTCTCTGTGGCCTTATCTTGAGGAGGGGA										
Mus musculus	RefSeq	ILMN_213515	ILMN_232958	IQCF5	XM_909493.3	XM_909493.3		75470	149260291	XM_909493.3	Iqcf5	XP_914586.1	ILMN_2637839	003140243	S	369	CGCATCATCCAGGTTTATTGGCGTTGGCATAGTTGTCACACTCGTGGCTT				9qF1	PREDICTED: Mus musculus IQ motif containing F5 (Iqcf5), mRNA.					
Mus musculus	RefSeq	ILMN_194980	ILMN_240766	LRRC17	XM_904948.2	XM_904948.2		74511	94374239	XM_904948.2	Lrrc17	XP_910041.1	ILMN_2511456	001990243	S	1528	GAGATCACCCAGCAAAGAAGCACAGAGTGAGAATCACCATTGTGGGGTAG					PREDICTED: Mus musculus leucine rich repeat containing 17, transcript variant 1 (Lrrc17), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215070	ILMN_215070	CDRT4	NM_025496.1	NM_025496.1		66338	13384919	NM_025496.1	Cdrt4	NP_079772.1	ILMN_2655175	003780554	S	533	GGGGCCCACATCAAACTACAACAAGATCATTTTCTCCAAGAGGCCTGCGA	11	+	62806407-62806456	11qB2-qB3	Mus musculus CMT1A duplicated region transcript 4 (Cdrt4), mRNA.				RP23-172P19.2; 1700019I23Rik	RP23-172P19.2; 1700019I23Rik
Mus musculus	RefSeq	ILMN_215065	ILMN_215065	LMF1	NM_029624.2	NM_029624.2		76483	31981341	NM_029624.2	Lmf1	NP_083900.2	ILMN_2655144	000020296	S	1618	AGGGCAAGTGGTGGATCCGCAAGCGAATTGGTCCTTACTTCCCCCCACTC	17	+	25799543-25799592	17qA3.3	Mus musculus lipase maturation factor 1 (Lmf1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The regulated release of proteins from a cell or group of cells [goid 9306] [evidence IMP]		2400010G15Rik	2400010G15Rik
Mus musculus	RefSeq	ILMN_258779	ILMN_258779	EPB4.1L1	NM_001006664.2	NM_001006664.2		13821	76056874	NM_001006664.2	Epb4.1l1	NP_001006665.1	ILMN_3096592	006860528	A	5918	GCTTTCTGTGAATCTTTTCCACACGAGGGCAGAGGAAGTGCCAGGAGCTG	2	+	156368648-156368697	2qH1	Mus musculus erythrocyte protein band 4.1-like 1 (Epb4.1l1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4.1N; mKIAA0338; NBL1	4.1N; mKIAA0338; NBL1
Mus musculus	RefSeq	ILMN_221233	ILMN_316151	LOC100047155	XM_001477537.1	XM_001477537.1		100047155	149257355	XM_001477537.1	LOC100047155	XP_001477587.1	ILMN_2773880	002600672	S	1202	GCTTTGCTGAATGTTCAGAACGACTGGTGATAATTTTTTAATAGGAACCT					PREDICTED: Mus musculus similar to Small nuclear ribonucleoprotein polypeptide A (LOC100047155), mRNA.					
Mus musculus	RefSeq	ILMN_221233	ILMN_316151	LOC100047155	XM_001477537.1	XM_001477537.1		100047155	149257355	XM_001477537.1	LOC100047155	XP_001477587.1	ILMN_2732827	003990040	S	759	TTCAAGGGCAAACGGGGTGCACAGCTTGCAAAGGATATTGCCAGGAGAAG					PREDICTED: Mus musculus similar to Small nuclear ribonucleoprotein polypeptide A (LOC100047155), mRNA.					
Mus musculus	Riken	ILMN_203391	ILMN_203391	RBL1	ri|8430432F24|PX00025O22|AK033402|2385					AK033402	Rbl1		ILMN_1240408	005890088	S	2259	CTTGAGTGAGTAGGAAGATGGATAGGGTCCGAGAGGAATTGGAGGAGGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_223455	ILMN_223455	9930021D14RIK	NM_175682.3	NM_175682.3		319259	142381781	NM_175682.3	9930021D14Rik	NP_783613.1	ILMN_2764325	001570358	S	810	GCTTCCCGAGCAACATCTGTGTGTCTGTCTGCTTTTATTACCTCCCAGAC	17	+	24612227-24612276	17qA3.3	Mus musculus RIKEN cDNA 9930021D14 gene (9930021D14Rik), mRNA.			Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200551	ILMN_200551	LOC383334	XM_356990.1	XM_356990.1			38083623	XM_356990.1	LOC383334		ILMN_1247253	000020014	S	275	GGATGCTCTGCCACACCAAGCCTTCCAACATCCTGTCTTTGGAGGAAGAC										
Mus musculus	RefSeq	ILMN_209890	ILMN_209890	RNF4	NM_011278.3	NM_011278.3		19822	146134338	NM_011278.3	Rnf4	NP_035408.1	ILMN_1259754	004780373	S	1365	GCCACGAAAAGGTGGACTTTTAGTTTCCTTCCCACGAGAGCAGAGGTGAC				5qB2	Mus musculus ring finger protein 4 (Rnf4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AU018689	AU018689
Mus musculus	RefSeq	ILMN_222360	ILMN_222360	FZD4	NM_008055.2	NM_008055.2		14366	31560700	NM_008055.2	Fzd4	NP_032081.2	ILMN_2865248	006590458	S	3225	GGCCAGAGGCTGGATTGGTTAGCAGGGGATATGGTGTAGACGGAGTGAAA	7	+	89284870-89284919	7qE1	Mus musculus frizzled homolog 4 (Drosophila) (Fzd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fz4	Fz4
Mus musculus	RefSeq	ILMN_203716	ILMN_231262	EDIL3	NM_001037987.2	NM_001037987.2		13612	141803442	NM_001037987.2	Edil3	NP_001033076.1	ILMN_2559440	005820164	S	556	ACCCCTGTGAAAATGGTGGCATCTGTCTGTCAGGACTGGCTGATGATTCC	13	+	89084444-89084493	13qC3	Mus musculus EGF-like repeats and discoidin I-like domains 3 (Edil3), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Del1	Del1
Mus musculus	MEEBO	ILMN_212662	ILMN_212662	5730433N10RIK	scl16573.1.1_244	XM_149059.1			20853067	XM_149059.1	5730433N10Rik		ILMN_1226909	000520129	S	1302	CTCAGCCTCCATTAAATCTCAAGACCACTGAGACAGGGTTTGTCTGACCC										
Mus musculus	RefSeq	ILMN_216137	ILMN_216137	DLGAP3	NM_198618.3	NM_198618.3		242667	142351843	NM_198618.3	Dlgap3	NP_941020.1	ILMN_1257751	003850010	S	3932	TGGGCTTCGTGGGGATCAAGCTTCGTGGCTTTTTATGAAGAATCCCGAAC	4	+	126913991-126914040	4qD2.2	Mus musculus discs, large (Drosophila) homolog-associated protein 3 (Dlgap3), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]		Sapap3; BC058433; DAP3; DAP-3	Sapap3; BC058433; DAP3; DAP-3
Mus musculus	RefSeq	ILMN_192098	ILMN_192098	UBE1L	NM_023738.4	NM_023738.4		74153	146141173	NM_023738.4	Ube1l	NP_076227.1	ILMN_1230019	005130066	S	3050	TGACGAGGTAGCCACACCACGCCACCACTTGGCCATAACAAACTCTGCAT				9qF2	Mus musculus ubiquitin-activating enzyme E1-like (Ube1l), mRNA.				1300004C08Rik	1300004C08Rik
Mus musculus	Riken	ILMN_204050	ILMN_204050	A830033B12RIK	ri|A830033B12|PX00155N21|AK043789|1194					AK043789	A830033B12Rik		ILMN_1229244	006590603	S	825	ATGACCTAAGACAGGAGCCACCGCAGATGGACATGACTGCAGAGGCCTAT										
Mus musculus	MEEBO	ILMN_195670	ILMN_195670	SV40_SMALL_T_AG_SPECIFIC	SV40_small_t_Ag_specific						SV40_small_t_Ag_specific		ILMN_2517631	002970347	S	4	ACTGCTTCGATTGCTTTAGAATGTGGTTTGGACTTGATCTTTGTGAAGGA										
Mus musculus	RefSeq	ILMN_195033	ILMN_238999	REM1	NM_009047.5	NM_009047.5		19700	142368615	NM_009047.5	Rem1	NP_033073.1	ILMN_1228010	001850156	S	1268	CTTCCTGCCGGGCGAAAGGATGAATAGGCAGACTATGGGGCTATAAACCC	2	+	152460592-152460641	2qH1	Mus musculus rad and gem related GTP binding protein 1 (Rem1), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rem; E030011C07Rik	Rem; E030011C07Rik
Mus musculus	RefSeq	ILMN_215935	ILMN_215935	CFTR	NM_021050.2	NM_021050.2		12638	116008179	NM_021050.2	Cftr	NP_066388.1	ILMN_1259577	006280685	S	6154	GCAGCTTTGAAGAAGATGGTACCAAAGGTTAAGACGGCCCCCTGATGGGC	6	+	18221663-18221712	6qA2	Mus musculus cystic fibrosis transmembrane conductance regulator homolog (Cftr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IMP]; The appearance of interleukin-6 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 32635] [evidence IMP]; The appearance of interleukin-8 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 32637] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	Abcc7; AW495489	Abcc7; AW495489
Mus musculus	RefSeq	ILMN_230414	ILMN_230414	PVRL3	NM_021496.1	NM_021496.1		58998	12957493	NM_021496.1	Pvrl3	NP_067471.1	ILMN_3012274	001010348	I	1430	GCCCCCTTTATAGCCAGATGTGCCACCAAGACCGAAGCCCTCGCCAACAT	16	-	46395262-46395311	16qB5	Mus musculus poliovirus receptor-related 3 (Pvrl3), transcript variant beta, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form [goid 60042] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA407785; AW538082; AU016832; 2610301B19Rik; 4921513D19Rik; 3000002N23Rik	AA407785; AW538082; AU016832; 2610301B19Rik; 4921513D19Rik; 3000002N23Rik
Mus musculus	RefSeq	ILMN_230414	ILMN_230414	PVRL3	NM_021496.1	NM_021496.1		58998	12957493	NM_021496.1	Pvrl3	NP_067471.1	ILMN_3082864	004610369	A	906	CGTGTGGAGCAGGTTGGATGGACAATGGCCTGATGGTTTATTGGCGTCAG	16	-	46454850-46454888:46458227-46458237	16qB5	Mus musculus poliovirus receptor-related 3 (Pvrl3), transcript variant beta, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form [goid 60042] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA407785; AW538082; AU016832; 2610301B19Rik; 4921513D19Rik; 3000002N23Rik	AA407785; AW538082; AU016832; 2610301B19Rik; 4921513D19Rik; 3000002N23Rik
Mus musculus	RefSeq	ILMN_211656	ILMN_211656	SORBS3	NM_011366.2	NM_011366.2		20410	118130192	NM_011366.2	Sorbs3	NP_035496.1	ILMN_2618221	002120678	S	2398	CTTTGACAGCCCCCTTCACCGCCCCTCAAATACAGACATCTGCTTTCATG	14	-	70580741-70580790	14qD2	Mus musculus sorbin and SH3 domain containing 3 (Sorbs3), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	Sh3d4; SH3P3; vinexin-g	Sh3d4; SH3P3; vinexin-g
Mus musculus	RefSeq	ILMN_194130	ILMN_246709	KIF16B	NM_001081133.2	NM_001081133.2		16558	148224506	NM_001081133.2	Kif16b	NP_001074602.1	ILMN_1231332	001850703	S	3917	CATCTCCCCTTCACATCAACAAAGTGGGACTGACCCTGTCCAAGCACACC				2qG1	Mus musculus kinesin family member 16B (Kif16b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	C80902; C80253; mKIAA1590; AA623607; 8430434E15Rik	C80902; C80253; mKIAA1590; AA623607; 8430434E15Rik
Mus musculus	RefSeq	ILMN_196430	ILMN_196430	4931426K16RIK	XM_357260.1	XM_357260.1			38075758	XM_357260.1	4931426K16Rik		ILMN_2701129	002100414	S	1436	TCACGGAGCATTCTAAGGAGTGCCTGGGAAGATAGGGCAGAGTTGTCTCC										
Mus musculus	RefSeq	ILMN_189993	ILMN_229899	LOC630320	XM_903445.3	XM_903445.3		630320	149263785	XM_903445.3	LOC630320	XP_908538.2	ILMN_2466239	004730528	S	221	GTAGTTACACCTACTATCCAGACACTGTGACGGGCCGATTCACCATCTCC	12|NT_114985.2	+	777179-777228		PREDICTED: Mus musculus similar to monoclonal antibody BBK-1 heavy chain (LOC630320), mRNA.					
Mus musculus	MEEBO	ILMN_189588	ILMN_189588	1700110N18RIK	scl48996.2.37_45				51769346	XM_283372	1700110N18Rik		ILMN_2462586	004260468	S	2	ACTTGATAAGGTAAACTGAAAACTAATAGTAGAAGTCATATCTTACAGAT										
Mus musculus	MEEBO	ILMN_216168	ILMN_216168	1110008L16RIK	scl43198.8.1_55	XM_126928.4			38050392	XM_126928.4	1110008L16Rik		ILMN_1238142	004260603	S	2219	CCTGGTGCAGAGATCCTCCTGTGAAGTGCCAACCAAATGGCTGTGCCTCC										
Mus musculus	RefSeq	ILMN_200101	ILMN_200101	LOC381668	XM_355633.1	XM_355633.1			38080368	XM_355633.1	LOC381668		ILMN_1214747	003520035	S	1639	CAGAAGTGCCCCCGTCTTAGCCCAGAGCAATCCCACATACCCAAACAGCC										
Mus musculus	Riken	ILMN_205238	ILMN_205238	E130308J18RIK	ri|E130308J18|PX00209O04|AK053790|1376					AK053790	E130308J18Rik		ILMN_1224809	007650689	S	1166	CCAGGTGCCTCTCAGCGTAGAAACTGACCTCTTGGGTCTCACAGAAATGG										
Mus musculus	RefSeq	ILMN_211844	ILMN_211844	ALS2	NM_028717.2	NM_028717.2		74018	22165356	NM_028717.2	Als2	NP_082993.1	ILMN_2817883	005960347	S	6134	TGGATACCACAGGTGCTCTTCCGTCTCATCTGCTGTACTCGGAGGCGAGC	1	-	59107618-59107667	1qC1.3	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) homolog (human) (Als2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [evidence IDA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process by which receptor molecules are returned to an active state and in an active cellular location after they have been stimulated by a ligand. An active state is when the receptor is ready to receive a signal [goid 1881] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence ISO]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence ISO]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence ISO]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence ISO]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISO]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence ISO]	MGC27807; mKIAA1563; 3222402C23Rik; Alsin; Als2cr6; 9430073A21Rik	MGC27807; mKIAA1563; 3222402C23Rik; Alsin; Als2cr6; 9430073A21Rik
Mus musculus	RefSeq	ILMN_219717	ILMN_219717	PLEKHH2	NM_177606.3	NM_177606.3		213556	142357535	NM_177606.3	Plekhh2	NP_808274.1	ILMN_2712631	002340386	S	6750	TCCATAGCCATTTTTTAAAGCAAGTGTATTATTATGATTGATTACAAGAG	17	+	85021346-85021395	17qE4	Mus musculus pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 (Plekhh2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC159286; E030001K05; AI256725; mKIAA2028	MGC159286; E030001K05; AI256725; mKIAA2028
Mus musculus	RefSeq	ILMN_216415	ILMN_216415	NFE2L1	NM_008686.2	NM_008686.2		18023	31982172	NM_008686.2	Nfe2l1	NP_032712.2	ILMN_1251729	001850564	S	4046	GGGCAGAGGGCTTTCCTAACCGAGCAGTAGGGATAGAAAGCGTGAGCCTG	11	-	96678868-96678917	11qD	Mus musculus nuclear factor, erythroid derived 2,-like 1 (Nfe2l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TCF-11; TCF11; LCR-F1; AA408798; AW212678; NRF1; Lcrf1	TCF-11; TCF11; LCR-F1; AA408798; AW212678; NRF1; Lcrf1
Mus musculus	Riken	ILMN_202145	ILMN_202145	SYT1	ri|2900076K17|ZX00069L09|AK013798|813					AK013798	Syt1		ILMN_1226085	004900202	S	64	TGCAGCGACAGCATCCGCAGTTAGCAGTGGGCAACTTGAGGCTGTAACCG						A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IDA]	Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence TAS]		
Mus musculus	Riken	ILMN_202421	ILMN_202421	2010009J12RIK	ri|2010009J12|ZX00043L22|AK008164|1175					AK008164	2010009J12Rik		ILMN_1251270	003420193	S	486	CAGCTGCAATCAGTGGTTTCACCAGGTCTGGGGTGGTGTCTCTCCAGAAA										
Mus musculus	MEEBO	ILMN_192612	ILMN_192612	TADA3L	scl28544.8_252				20149313	NM_133932	Tada3l		ILMN_2489694	006110437	S	14	CTACTGCACGGGGCCACCAAGGACCTGTTCCCTCAGGTGTTTCTTCCATG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 30374] [evidence IDA]		
Mus musculus	Riken	ILMN_204159	ILMN_204159	CCNI	ri|C820001G04|PX00087H01|AK050465|2045					AK050465	Ccni		ILMN_2562831	005870717	S	70	CGAGCGGACGCGCCAGCGCCTCTGTCTCGCTTTTTCTTATTTTCTCCCCC							Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence TAS]	Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence ISS]		
Mus musculus	Riken	ILMN_207361	ILMN_207361	C030034J23RIK	ri|C030034J23|PX00665J16|AK081262|2599					AK081262	C030034J23Rik		ILMN_1236168	002900711	S	2387	GAGAATGCTAGGCGGTGTACTGCTTTTTAGAAGGCTGGATGTGGTGAGCG										
Mus musculus	MEEBO	ILMN_216108	ILMN_216108	SLC17A6	scl32619.12_480				31543716	NM_080853	Slc17a6		ILMN_2773047	001780433	S	3821	CTGTCAGTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of neurotransmitters into neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters. It does not occur during cholinergic synaptic transmission. Instead, acetylcholine is enzymatically degraded in the synaptic cleft [goid 1504] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid [goid 5313] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194847	ILMN_257013	ADCYAP1	NM_009625.2	NM_009625.2		11516	40254598	NM_009625.2	Adcyap1	NP_033755.1	ILMN_1227605	005090736	S	1831	CCTCCTTCCTACCCTTGCCCTCATGCATTGTTTTAGAGTCATTTGCCATT	17	+	93604568-93604617	17qE5	Mus musculus adenylate cyclase activating polypeptide 1 (Adcyap1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA];  [goid 5057] [evidence IDA];  [goid 5057] [evidence TAS]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence TAS]	PACAP	PACAP
Mus musculus	RefSeq	ILMN_200637	ILMN_200637	GM1412	XM_357650.1	XM_357650.1		384445	38084592	XM_357650.1	Gm1412	XP_357650.1	ILMN_2539471	000150102	S	2	TGAGAAAGCCCCAGAAAGCCCCTCTGGCCACTGACCCAGTCAAGGAGGAA	6	+	82684225-82684274		PREDICTED: Mus musculus gene model 1412, (NCBI) (Gm1412), mRNA.					
Mus musculus	RefSeq	ILMN_236655	ILMN_236655	DNMT3B	NM_001003963.1	NM_001003963.1		13436	51556270	NM_001003963.1	Dnmt3b	NP_001003963.1	ILMN_3114377	006510309	A	3630	CAAATGAGGGGCCCAGTCCCCAACAGCTCAGGTCCCCAGAACCCCCTAGT	2	+	153378671-153378720	2qH1	Mus musculus DNA methyltransferase 3B (Dnmt3b), transcript variant 4, mRNA.	A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IGI]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence IDA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IMP]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IGI]; Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IGI]	Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence ISO]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IGI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC124407	MGC124407
Mus musculus	RefSeq	ILMN_211840	ILMN_241874	OLFR616	NM_147099.1	NM_147099.1		259103	22128770	NM_147099.1	Olfr616	NP_667310.1	ILMN_1221108	004150458	S	649	GTCATCTCTTACATCTTGATTTTGAAAACAGTGCTGGGTATCGCCTCAGG	7	-	110713093-110713142	7qE3	Mus musculus olfactory receptor 616 (Olfr616), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR19-1; MGC123785; MGC123786	MOR19-1; MGC123785; MGC123786
Mus musculus	RefSeq	ILMN_195876	ILMN_231753	PJA2	NM_144859.2	NM_144859.2		224938	70778928	NM_144859.2	Pja2	NP_659108.1	ILMN_2695035	006980041	S	2315	CCGTGCATCCCTTTTCTTCGGTTGACCATGGTGTTGATTGTGACGTCAGC	17	-	64632510-64632559	17qE1.1	Mus musculus praja 2, RING-H2 motif containing (Pja2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI447901; mKIAA0438; Neurodap1; MGC27629; AL022700	AI447901; mKIAA0438; Neurodap1; MGC27629; AL022700
Mus musculus	RefSeq	ILMN_195876	ILMN_231753	PJA2	NM_144859.2	NM_144859.2		224938	70778928	NM_144859.2	Pja2	NP_659108.1	ILMN_1225855	001770148	S	4019	TTTTAGAAAAGAAAATGAAGTTTTAGGACTTTCATGGTAACAAACCTGAC	17	-	64630806-64630855	17qE1.1	Mus musculus praja 2, RING-H2 motif containing (Pja2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI447901; mKIAA0438; Neurodap1; MGC27629; AL022700	AI447901; mKIAA0438; Neurodap1; MGC27629; AL022700
Mus musculus	RefSeq	ILMN_231753	ILMN_231753	PJA2	NM_144859.2	NM_144859.2		224938	70778928	NM_144859.2	Pja2	NP_659108.1	ILMN_3154457	004640403	A	4413	GCCCAGGTCTAACTGTGATGATTGGTTTATTGGTCTACAATCCCAGCCTG	17	-	64630412-64630461	17qE1.1	Mus musculus praja 2, RING-H2 motif containing (Pja2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI447901; mKIAA0438; Neurodap1; MGC27629; AL022700	AI447901; mKIAA0438; Neurodap1; MGC27629; AL022700
Mus musculus	RefSeq	ILMN_223081	ILMN_223081	DHRS3	NM_011303.4	NM_011303.4		20148	146149311	NM_011303.4	Dhrs3	NP_035433.1	ILMN_2759095	001850039	S	2132	GTCACCAGAAACAATGGCAACGCATCACTTAGGGTCAGCGCTGTGGAGTG				4qE1	Mus musculus dehydrogenase/reductase (SDR family) member 3 (Dhrs3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	retSDR1; Rsdr1	retSDR1; Rsdr1
Mus musculus	RefSeq	ILMN_223401	ILMN_223401	TEDDM1	NM_178244.2	NM_178244.2		240819	31342452	NM_178244.2	Teddm1	NP_839975.1	ILMN_1235654	004900240	S	1142	GAGAGAGAGTGAAACAATGGCGTTAAAGAGAGGAATCTCTGCTCAAGCCC	1	+	155740063-155740112	1qG3	Mus musculus transmembrane epididymal protein 1 (Teddm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Epdd1; e9-1	Epdd1; e9-1
Mus musculus	RefSeq	ILMN_210112	ILMN_210112	DNAHC8	NM_013811.3	NM_013811.3		13417	153792272	NM_013811.3	Dnahc8	NP_038839.2	ILMN_2602341	003850112	S	14398	CCGGATCACTGGATCCTGAGAGGGGTGGCCCTCTTGTGTGACATCAAGTA				17qA3.3	Mus musculus dynein, axonemal, heavy chain 8 (Dnahc8), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	Hst6.7b; ATPase; P1-Loop	Hst6.7b; ATPase; P1-Loop
Mus musculus	MEEBO	ILMN_221062	ILMN_221062	4933430A09	scl0328766.3_16				51770025	XM_484600	4933430A09		ILMN_2730577	004540437	S	170	AACAGGAGGTTATTTGAAATGCATGGCCCTGGAAAAGATACAGCAGTAGA										
Mus musculus	RefSeq	ILMN_221991	ILMN_236270	PDE6H	NM_023898.4	NM_023898.4		78600	114158703	NM_023898.4	Pde6h	NP_076387.2	ILMN_2776969	004880035	S	448	GGACCGTATATGGCCCTGACCCATGAGTTATGGTACGTGTTCTTTCCTGA	6	+	136911894-136911943	6qG1	Mus musculus phosphodiesterase 6H, cGMP-specific, cone, gamma (Pde6h), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 45745] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity [goid 45742] [evidence IDA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]	A930033D18Rik; PDEgamma	A930033D18Rik; PDEgamma
Mus musculus	Riken	ILMN_201738	ILMN_201738	2010305C02RIK	ri|2010305C02|ZX00044I20|AK008522|1111					AK008522	2010305C02Rik		ILMN_1213090	000150196	S	1026	CTGCCTTCCAGCAAAAGGGAGGACTTCGCTGAGGAGAGAACATTGAACCC										
Mus musculus	RefSeq	ILMN_216837	ILMN_216837	4933411G11RIK	NM_177880.4	NM_177880.4		330228	146198848	NM_177880.4	4933411G11Rik	NP_808548.1	ILMN_2675932	002100376	S	2032	TGTAAGTGAGAATTGTTGTTTGAAGTTTACTCTTTATTATTGAGACGTGA				5qG2	Mus musculus RIKEN cDNA 4933411G11Rik gene (4933411G11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_192463	ILMN_327724	A730020E08RIK	XM_001475005.1	XM_001475005.1		320902	149255559	XM_001475005.1	A730020E08Rik	XP_001475055.1	ILMN_2693339	006900768	S	1572	CCTTTACCAACAGTGAGTATTCCTTAGGTCTGGTTCACTCTTTAATGAGG					PREDICTED: Mus musculus RIKEN cDNA A730020E08 gene (A730020E08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_192463	ILMN_327724	A730020E08RIK	XM_001475005.1	XM_001475005.1		320902	149255559	XM_001475005.1	A730020E08Rik	XP_001475055.1	ILMN_1252280	000360154	S	3558	CCAAAGATGGGGTCATGAAAGACTTGCTCATCATTATATCTCTGAAGCGC					PREDICTED: Mus musculus RIKEN cDNA A730020E08 gene (A730020E08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221430	ILMN_221430	1700011L22RIK	XM_134463.3	XM_134463.3		67687	94383663	XM_134463.3	1700011L22Rik	XP_134463.1	ILMN_1250028	004220368	S	782	CGTGTCTGTGTTAAGCCATTGAGACAGGAGTTCCAAGAAGGCTTTGATGG	8	-	81734462-81734511	8qC2	PREDICTED: Mus musculus RIKEN cDNA 1700011L22 gene, transcript variant 1 (1700011L22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213272	ILMN_213272	NPHS2	NM_130456.3	NM_130456.3		170484	118131068	NM_130456.3	Nphs2	NP_569723.1	ILMN_2754041	005340021	S	613	TTATAATGGAGATAGACGCTGTCTGCTACTACCGCATGGAAAATGCCTCT	1	+	158251034-158251083	1qG3	Mus musculus nephrosis 2 homolog, podocin (human) (Nphs2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PDCN; SRN1; AI790225	PDCN; SRN1; AI790225
Mus musculus	RefSeq	ILMN_213272	ILMN_213272	NPHS2	NM_130456.3	NM_130456.3		170484	118131068	NM_130456.3	Nphs2	NP_569723.1	ILMN_1223450	006620600	S	1136	GAGCATCAACTACCCAAGTTCCTCCAAACCAGTTGAACCACTAAATCCCA	1	+	158256194-158256243	1qG3	Mus musculus nephrosis 2 homolog, podocin (human) (Nphs2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PDCN; SRN1; AI790225	PDCN; SRN1; AI790225
Mus musculus	RefSeq	ILMN_213272	ILMN_213272	NPHS2	NM_130456.3	NM_130456.3		170484	118131068	NM_130456.3	Nphs2	NP_569723.1	ILMN_2717146	002940040	S	2980	GCCTCTGGCCCTAACATCTCCACCTCTCCCTATATCATCTGTTGGAGATT	1	+	158258038-158258087	1qG3	Mus musculus nephrosis 2 homolog, podocin (human) (Nphs2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PDCN; SRN1; AI790225	PDCN; SRN1; AI790225
Mus musculus	RefSeq	ILMN_213272	ILMN_213272	NPHS2	NM_130456.3	NM_130456.3		170484	118131068	NM_130456.3	Nphs2	NP_569723.1	ILMN_2653990	004920110	S	250	TAGTGGACGTGGACGAGGTTCGGGGCCCTGGTGAGGAGGGCACGGAAGTG	1	+	158241115-158241164	1qG3	Mus musculus nephrosis 2 homolog, podocin (human) (Nphs2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PDCN; SRN1; AI790225	PDCN; SRN1; AI790225
Mus musculus	RefSeq	ILMN_258138	ILMN_258138	ZFP560	NM_001004190.3	NM_001004190.3		434377	118131087	NM_001004190.3	Zfp560	NP_001004190.2	ILMN_3078349	007330465	I	4052	CATGCGTCTCTGTGTGTATGAATGTGGCCTCTACAGCTAAGAGACTTGGG	9	-	20150210-20150259	9qA3	Mus musculus zinc finger protein 560 (Zfp560), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2310030G09Rik; Znf560	2310030G09Rik; Znf560
Mus musculus	RefSeq	ILMN_258138	ILMN_258138	ZFP560	NM_001004190.3	NM_001004190.3		434377	118131087	NM_001004190.3	Zfp560	NP_001004190.2	ILMN_3157597	002480167	A	2011	GTGCGCTCTGGCCTTACAAAACATATACGAACTCACACTGGGGAGAAGCC	9	-	20152251-20152300	9qA3	Mus musculus zinc finger protein 560 (Zfp560), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2310030G09Rik; Znf560	2310030G09Rik; Znf560
Mus musculus	RefSeq	ILMN_204320	ILMN_258138	ZFP560	NM_001004190.3	NM_001004190.3		434377	118131087	NM_001004190.3	Zfp560	NP_001004190.2	ILMN_1248530	006370093	S	3729	GACAGGCTCTCACTGTTTAGCTCTGGAACTCACTGTGTAAACTAGCTTGG	9	-	20150533-20150582	9qA3	Mus musculus zinc finger protein 560 (Zfp560), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2310030G09Rik; Znf560	2310030G09Rik; Znf560
Mus musculus	RefSeq	ILMN_184792	ILMN_258138	ZFP560	NM_001004190.3	NM_001004190.3		434377	118131087	NM_001004190.3	Zfp560	NP_001004190.2	ILMN_1258594	001980725	S	65	CTGTGCGGGCCAGCGCGGCCGGAACCTCCGCTGCGCGCTTGGTTCTCTGT	9	-	20189488-20189537	9qA3	Mus musculus zinc finger protein 560 (Zfp560), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2310030G09Rik; Znf560	2310030G09Rik; Znf560
Mus musculus	RefSeq	ILMN_213042	ILMN_213042	SPATS2	NM_139140.1	NM_139140.1		72572	20982832	NM_139140.1	Spats2	NP_631879.1	ILMN_2632931	001690563	S	1980	CTCCCATCCAGTTCAACCTAATAACTGGACTTTAGGAAATGTATACTTAG	15	+	99042819-99042868	15qF1	Mus musculus spermatogenesis associated, serine-rich 2 (Spats2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	59kDa; p59; Scr59; 2700012F11Rik	59kDa; p59; Scr59; 2700012F11Rik
Mus musculus	RefSeq	ILMN_195038	ILMN_242493	D630044L22RIK	NM_175505.3	NM_175505.3		240054	142386153	NM_175505.3	D630044L22Rik	NP_780714.1	ILMN_1235889	007510592	S	2716	ACTGTTTCACTCGCTGCTGGACGCTGTCGCCCACTGGGAAGCCGACAGAT	17	+	26100307-26100356	17qA3.3	Mus musculus RIKEN cDNA gene D630044L22 gene (D630044L22Rik), mRNA.					
Mus musculus	MEEBO	ILMN_196052	ILMN_196052	IGHV1S136_AF304557_IG_HEAVY_VARIABLE_1S136_154	IGHV1S136_AF304557_Ig_heavy_variable_1S136_154						IGHV1S136_AF304557_Ig_heavy_variable_1S136_154		ILMN_2521190	006760438	S	15	GGTACTGAGTACACTGAGAAGTTCAAAGGCAAGGCCACACTGACTTTAGA										
Mus musculus	MEEBO	ILMN_186362	ILMN_186362	9430041J12RIK	scl31826.9.1_38						9430041J12Rik		ILMN_2434893	001820220	S	16	CAGGAAGAACTCCACATGCCAGCCTGGATCTTCCACATGGTAGTCTCACC										
Mus musculus	RefSeq	ILMN_200307	ILMN_312030	LOC100041388	XM_001476627.1	XM_001476627.1		100041388	149248932	XM_001476627.1	LOC100041388	XP_001476677.1	ILMN_1244099	004220386	S	2335	CACTAAGAGAACACAAATGCCAGCCCAGGCTACTATACCCAGCCAAACTC	2	-	18194659-18194708	2qA3	PREDICTED: Mus musculus similar to ORF1 (LOC100041388), mRNA.					
Mus musculus	RefSeq	ILMN_259038	ILMN_259038	TPT1	NM_009429.2	NM_009429.2		22070	59276013	NM_009429.2	Tpt1	NP_033455.1	ILMN_2858106	003710605	S	457	AGCAGATTAAGCACATCCTTGCTAATTTCAATAACTACCAGTTTTTTATT	14	+	76246566-76246606:76247051-76247059	14qD3	Mus musculus tumor protein, translationally-controlled 1 (Tpt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence ISO]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	Trt; TCTP	Trt; TCTP
Mus musculus	RefSeq	ILMN_216558	ILMN_331642	CNGB1	XM_001476198.1	XM_001476198.1		333329	149259226	XM_001476198.1	Cngb1	XP_001476248.1	ILMN_1234944	007100703	S	5956	GCTCAGCCATCGGAACTAGTCTAAGCTGTTTCCACAGCACACAAGAATAC					PREDICTED: Mus musculus cyclic nucleotide gated channel beta 1 (Cngb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196497	ILMN_315961	RASGEF1A	XM_001479962.1	XM_001479962.1		70727	149255728	XM_001479962.1	Rasgef1a	XP_001480012.1	ILMN_1223066	002630167	S	2444	GAAGGGAACCTTTACATACGGGCTTTCCAAAGTTTACATTTTCATTTTCC				6qF1	PREDICTED: Mus musculus RasGEF domain family, member 1A (Rasgef1a), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196497	ILMN_315961	RASGEF1A	XM_001479962.1	XM_001479962.1		70727	149255728	XM_001479962.1	Rasgef1a	XP_001480012.1	ILMN_2524519	002320102	S	1713	GGACAAGAAGATTCAGAGTTACGTGCTCACGGCGCCCATCTACAGCGAGG				6qF1	PREDICTED: Mus musculus RasGEF domain family, member 1A (Rasgef1a), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199238	ILMN_326316	CHMP6	NM_001085498.1	NM_001085498.1		208092	147904546	NM_001085498.1	Chmp6	NP_001078967.1	ILMN_1251583	000870523	S	1331	CTGGACACACTAAGCCACCAACGCCCAGGAGGCACGGAACTCTGAACTGA				11qE2	Mus musculus chromatin modifying protein 6 (Chmp6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_232794	ILMN_232794	TRP53I11	NM_001025246.1	NM_001025246.1		277414	71480149	NM_001025246.1	Trp53i11	NP_001020417.1	ILMN_2873131	004480288	S	2434	CTGCTTGGAAGGAGGCAGTGATGGAGATAGAGCCCCACTCTGAGTCTGGG	2	+	93041686-93041735	2qE1	Mus musculus transformation related protein 53 inducible protein 11 (Trp53i11), mRNA.				RP23-217C12.1; Tp53i11	RP23-217C12.1; Tp53i11
Mus musculus	RefSeq	ILMN_189302	ILMN_232794	TRP53I11	NM_001025246.1	NM_001025246.1		277414	71480149	NM_001025246.1	Trp53i11	NP_001020417.1	ILMN_1220459	001260010	S	538	CTGAAGTCACAAGCAAGACCCCCATCCGCCTCTACGGTGGTGCCCTCCTT	2	+	93039098-93039147	2qE1	Mus musculus transformation related protein 53 inducible protein 11 (Trp53i11), mRNA.				RP23-217C12.1; Tp53i11	RP23-217C12.1; Tp53i11
Mus musculus	RefSeq	ILMN_214233	ILMN_214233	OSGIN1	NM_027950.1	NM_027950.1		71839	30794397	NM_027950.1	Osgin1	NP_082226.1	ILMN_2645780	000430037	S	1887	CTGAGTGTCCAACTTGGAGGGCCCCAGGCCCAACTTTTCACCATCAGATC	8	+	121970082-121970131	8qE1	Mus musculus oxidative stress induced growth inhibitor 1 (Osgin1), mRNA.				Okl38; 1700012B18Rik	Okl38; 1700012B18Rik
Mus musculus	RefSeq	ILMN_258273	ILMN_258273	OLFR908	NM_146872.1	NM_146872.1		258872	22129132	NM_146872.1	Olfr908	NP_667083.1	ILMN_2813940	003310152	S	756	TGGTTCAGGCGCATTCATGTATCTTCAACCCTCTTCACCTGAGTCTATGG	9	+	38324374-38324423	9qA5.1	Mus musculus olfactory receptor 908 (Olfr908), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR165-2	MOR165-2
Mus musculus	RefSeq	ILMN_214380	ILMN_214380	CXCR5	NM_007551.2	NM_007551.2		12145	42475949	NM_007551.2	Cxcr5	NP_031577.2	ILMN_2990502	001470408	S	2171	CCCCTGGGAGGGTACCACTCACATGGAACCAGAGGAAGCTGCTCCATGCA	9	-	44320264-44320313	9qA5.2	Mus musculus chemochine (C-X-C motif) receptor 5 (Cxcr5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4945] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	Gpcr6; MDR15; CXCR-5; CXC-R5; CXCR5	Gpcr6; MDR15; CXCR-5; CXC-R5; CXCR5
Mus musculus	RefSeq	ILMN_214380	ILMN_214380	CXCR5	NM_007551.2	NM_007551.2		12145	42475949	NM_007551.2	Cxcr5	NP_031577.2	ILMN_1219316	001050632	S	2080	CGACAGAGGTTCCTGTCTTCATTAGGCAGAGGCAATATAAGAAGCCAACC	9	-	44320355-44320404	9qA5.2	Mus musculus chemochine (C-X-C motif) receptor 5 (Cxcr5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4945] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	Gpcr6; MDR15; CXCR-5; CXC-R5; CXCR5	Gpcr6; MDR15; CXCR-5; CXC-R5; CXCR5
Mus musculus	RefSeq	ILMN_214380	ILMN_214380	CXCR5	NM_007551.2	NM_007551.2		12145	42475949	NM_007551.2	Cxcr5	NP_031577.2	ILMN_2990494	000050091	S	2372	GCTTCAGAGACTGTATCCTCATTGCAGAACCGTGAAGACACCTGGGGACC	9	-	44320063-44320112	9qA5.2	Mus musculus chemochine (C-X-C motif) receptor 5 (Cxcr5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4945] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	Gpcr6; MDR15; CXCR-5; CXC-R5; CXCR5	Gpcr6; MDR15; CXCR-5; CXC-R5; CXCR5
Mus musculus	RefSeq	ILMN_198779	ILMN_319509	LOC244229	XR_034238.1	XR_034238.1		244229	149258053	XR_034238.1	LOC244229		ILMN_1214103	007040360	S	481	CCACCATCCCTGTGCAGAGAGGCTACTGGAGGAACAAGATCAGCAAGCTG				7qF4	PREDICTED: Mus musculus similar to ribosomal protein S2 (LOC244229), misc RNA.					
Mus musculus	Riken	ILMN_204802	ILMN_204802	4732423C17RIK	ri|4732423C17|PX00050J09|AK028643|2427					AK028643	4732423C17Rik		ILMN_1260417	001090010	S	434	GGTTGTGACATTTTGGTATCGGGCTCCGGAACTTTTACTTGGTGCCAGGC										
Mus musculus	MEEBO	ILMN_209811	ILMN_209811	9230110F15RIK	scl077080.1_219	XM_134713.2			38089765	XM_134713.2	9230110F15Rik		ILMN_1249520	002350240	S	123	TGCAGGCATCTTTTGCTCTTGTGTTCATCCAAGTCCAAGCTACAGTGTGC										
Mus musculus	Riken	ILMN_204997	ILMN_204997	9430048B09RIK	ri|9430048B09|PX00109L21|AK034852|2710					AK034852	9430048B09Rik		ILMN_1229134	005270487	S	2623	CAGCCTCATCGCCGTTCTTTGGCATGTTTTGCTTTGCAGTTGGGCTGGGG										
Mus musculus	RefSeq	ILMN_209036	ILMN_209036	PLEKHA2	NM_031257.2	NM_031257.2		83436	31543492	NM_031257.2	Plekha2	NP_112547.1	ILMN_1214118	000270592	S	2999	GCTCTCCGGGTGAGAGGAAGCATGCTCTTTCAAATGTGACTGTGACCCTG	8	-	26151473-26151522	8qA2	Mus musculus pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 (Plekha2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IDA]	W91773; AI851530; TAPP2; AU041791; 6430512N22Rik	W91773; AI851530; TAPP2; AU041791; 6430512N22Rik
Mus musculus	RefSeq	ILMN_201171	ILMN_201171	LOC384888	XM_357919.1	XM_357919.1			38089615	XM_357919.1	LOC384888		ILMN_1226516	005700437	S	530	AACTGGCCATCGTCATTGGCATTCTGGTTGCCCAGCGCCTGACCGGCTGG										
Mus musculus	RefSeq	ILMN_204482	ILMN_311677	ENSMUSG00000038442	XM_001473558.1	XM_001473558.1		436015	149258290	XM_001473558.1	ENSMUSG00000038442	XP_001473608.1	ILMN_1254623	006560612	S	1007	TAGAGCTCCAGCAACAGTACGCCCGCCTTTCCACAGAGCTCGCTTCACTC	7	+	149470121-149470170	7qF5	PREDICTED: Mus musculus predicted gene, ENSMUSG00000038442 (ENSMUSG00000038442), mRNA.					
Mus musculus	RefSeq	ILMN_186105	ILMN_236150	LRFN5	NM_178714.4	NM_178714.4		238205	146198860	NM_178714.4	Lrfn5	NP_848829.2	ILMN_2617318	000380152	S	3346	GGTTCAGGTGCCAAAATTGGGCAAAGCTACAATTTTTTCCCATAATTCAG				12qC1	Mus musculus leucine rich repeat and fibronectin type III domain containing 5 (Lrfn5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C130061B21; AI604817; AI427653; mKIAA4208; KIAA4208	C130061B21; AI604817; AI427653; mKIAA4208; KIAA4208
Mus musculus	RefSeq	ILMN_198800	ILMN_242998	EG546980	XM_913350.3	XM_913350.3		546980	149257427	XM_913350.3	EG546980	XP_918443.3	ILMN_1243092	004590435	S	2264	TCTTGGCTTCAAGTGCAGGGCTGCTTCTTTGCATTTTTGCTCCAAAGTGC				7qD3	PREDICTED: Mus musculus predicted gene, EG546980 (EG546980), mRNA.					
Mus musculus	RefSeq	ILMN_190712	ILMN_312573	PURG	NM_001098233.1	NM_001098233.1		75029	148287014	NM_001098233.1	Purg	NP_001091703.1	ILMN_2681936	001660086	S	712	AATTTCGTGATGCCTTGGTTCAGCTGATTGAAGACTACGGCGAAGGAGAC				8qA4	Mus musculus purine-rich element binding protein G (Purg), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4930486B15Rik	4930486B15Rik
Mus musculus	RefSeq	ILMN_190712	ILMN_312573	PURG	NM_001098233.1	NM_001098233.1		75029	148287014	NM_001098233.1	Purg	NP_001091703.1	ILMN_2472613	005310022	S	978	GTTGAGGAATAAGGACTAAATCCCTTATGTTACACTGCAGAATAAAGGCA				8qA4	Mus musculus purine-rich element binding protein G (Purg), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4930486B15Rik	4930486B15Rik
Mus musculus	RefSeq	ILMN_197734	ILMN_259953	AGXT2	NM_001031851.1	NM_001031851.1		268782	73661177	NM_001031851.1	Agxt2	NP_001027021.1	ILMN_2529180	000770022	S	636	GACAAATGTCGGAATCTACAAGATGGAAGTCCCTGGTGGGATAGGCTGCC	15	+	10310397-10310446	15qA1	Mus musculus alanine-glyoxylate aminotransferase 2 (Agxt2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: pyruvate + (R)-3-amino-2-methylpropanoate = L-alanine + methylmalonate-semialdehyde [goid 47305] [evidence IEA]; Catalysis of the reaction: L-alanine + glyoxylate = pyruvate + glycine [goid 8453] [evidence IEA]	AI663818; AI303810	AI663818; AI303810
Mus musculus	RefSeq	ILMN_259953	ILMN_259953	AGXT2	NM_001031851.1	NM_001031851.1		268782	73661177	NM_001031851.1	Agxt2	NP_001027021.1	ILMN_2791665	000510554	S	1357	AAGCTTCGGGACGAATTTGATATCGTTGGGGATGTCCGAGGCAAAGGCCT	15	+	10328838-10328887	15qA1	Mus musculus alanine-glyoxylate aminotransferase 2 (Agxt2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: pyruvate + (R)-3-amino-2-methylpropanoate = L-alanine + methylmalonate-semialdehyde [goid 47305] [evidence IEA]; Catalysis of the reaction: L-alanine + glyoxylate = pyruvate + glycine [goid 8453] [evidence IEA]	AI663818; AI303810	AI663818; AI303810
Mus musculus	RefSeq	ILMN_198728	ILMN_198728	LOC245475	XM_141851.2	XM_141851.2			38087116	XM_141851.2	LOC245475		ILMN_2532711	002940121	S	139	GGTAGACCACACCATGAGTACTCAGGTAAACCACCTCATGACCACTCAGG										
Mus musculus	Riken	ILMN_201898	ILMN_201898	4933413J09RIK	ri|4933413J09|PX00020E23|AK016807|900					AK016807	4933413J09Rik		ILMN_1220108	005130356	S	266	TGAACTTGGATGGGGCAGAGTCAGAATGTTCTTCCCACAGGACGGCCTTC										
Mus musculus	RefSeq	ILMN_216373	ILMN_235158	ATP5O	NM_138597.2	NM_138597.2		28080	118129975	NM_138597.2	Atp5o	NP_613063.1	ILMN_1247889	004540554	S	526	GACGCTGTTCTCTCTGAGTTAAAGACGGTGCTGAAGAGCTTCCTGAGTCC	16	-	91925813-91925862	16qC4	Mus musculus ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (Atp5o), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	D12Wsu28e; OSCP; ATPO	D12Wsu28e; OSCP; ATPO
Mus musculus	RefSeq	ILMN_188772	ILMN_235158	ATP5O	NM_138597.2	NM_138597.2		28080	118129975	NM_138597.2	Atp5o	NP_613063.1	ILMN_1237733	003520215	S	73	TTTCCCGGGCGGCTGTAGGTCAAACCCAAATGAAAAGAGACTACTGGCGC	16	-	91930638-91930649:91931765-91931800:91931801-91931802	16qC4	Mus musculus ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (Atp5o), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	D12Wsu28e; OSCP; ATPO	D12Wsu28e; OSCP; ATPO
Mus musculus	RefSeq	ILMN_235158	ILMN_235158	ATP5O	NM_138597.2	NM_138597.2		28080	118129975	NM_138597.2	Atp5o	NP_613063.1	ILMN_2917540	005820563	S	24	GCGCCAGTAGTCTCTTTTCATTTGGGTTTGACCTACAGCCGCCCGGGAAA	16	-	91931802-91931851	16qC4	Mus musculus ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (Atp5o), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	D12Wsu28e; OSCP; ATPO	D12Wsu28e; OSCP; ATPO
Mus musculus	RefSeq	ILMN_189892	ILMN_252543	PIGT	NM_133779.2	NM_133779.2		78928	120587020	NM_133779.2	Pigt	NP_598540.2	ILMN_2465338	002600121	S	2415	GCTTCCGTCTTTACTGGACATTCTGATGGCCCAGGCAATGGGCGCAGTAG	2	+	164333659-164333708	2qH3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class T (Pigt), mRNA. XM_922599	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor [goid 42765] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain [goid 16255] [evidence TAS]	Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor [goid 3923] [evidence IMP]	Ndap7; NDAP; 4930534E15Rik; CGI-06	Ndap7; NDAP; 4930534E15Rik; CGI-06
Mus musculus	RefSeq	ILMN_252543	ILMN_252543	PIGT	NM_133779.2	NM_133779.2		78928	120587020	NM_133779.2	Pigt	NP_598540.2	ILMN_2868131	004150050	S	2258	TAGCTTTTGAGGCTAACTCCCTCTGGAGCTGGTCTGGGCCAAGGCGTGGT	2	+	164333502-164333551	2qH3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class T (Pigt), mRNA. XM_922599	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor [goid 42765] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain [goid 16255] [evidence TAS]	Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor [goid 3923] [evidence IMP]	Ndap7; NDAP; 4930534E15Rik; CGI-06	Ndap7; NDAP; 4930534E15Rik; CGI-06
Mus musculus	RefSeq	ILMN_207450	ILMN_207450	SNX20	NM_027840.3	NM_027840.3		71607	146141134	NM_027840.3	Snx20	NP_082116.1	ILMN_1239963	002810424	S	1069	TGAAGGAGCTCACGGTGCGGGAGTATCTGTCCTGAGGCGGCCCGACAGGT				8qC3	Mus musculus sorting nexin 20 (Snx20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197823	ILMN_238584	ZYG11B	NM_001033634.2	NM_001033634.2		414872	142354695	NM_001033634.2	Zyg11b	NP_001028806.1	ILMN_2529490	002070603	S	693	CAATGAAGATCTGGCTGAAGTTGCTTCGCTGCCTAGACTGGAGAGCCTGG	4	-	107938799-107938848	4qC7	Mus musculus zyg-ll homolog B (C. elegans) (Zyg11b), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2810482G21Rik; FLJ13456; Gm431; mKIAA1730; D4Mgi23; 1110046I03Rik	2810482G21Rik; FLJ13456; Gm431; mKIAA1730; D4Mgi23; 1110046I03Rik
Mus musculus	RefSeq	ILMN_201373	ILMN_201373	LOC385059	XM_358023.1	XM_358023.1			38093400	XM_358023.1	LOC385059		ILMN_2542073	003060491	S	147	CCTTGATGCTCTGCACGACCACCTTGCTACCATCTACCCAGGAATGCGTG										
Mus musculus	RefSeq	ILMN_223189	ILMN_229922	4930432K09RIK	NM_028648.2	NM_028648.2		73779	142358141	NM_028648.2	4930432K09Rik	NP_082924.1	ILMN_2760525	007160400	S	1238	TCTAAATTTTTTCTCTTTTCTCAACAAATAGTTTATATGTTTTATTAAAA	5	+	88275348-88275352:88275353-88275397	5qE1	Mus musculus RIKEN cDNA 4930432K09 gene (4930432K09Rik), mRNA.				MGC118299	MGC118299
Mus musculus	RefSeq	ILMN_199685	ILMN_199685	LOC382883	XM_356729.1	XM_356729.1			38076096	XM_356729.1	LOC382883		ILMN_1252996	006550142	S	90	CAGAGCTAAAGGAGACTCAGAAGACCTCCAAGCCTTGCGTTTCCTGTCTG										
Mus musculus	RefSeq	ILMN_217406	ILMN_217406	ASB9	NM_027027.2	NM_027027.2		69299	142373912	NM_027027.2	Asb9	NP_081303.1	ILMN_2682835	006270156	S	932	GCAGCTATGCCGCCTGAGAATCCGGAAATGCTTTGGCATTCGGCAGCATC	X	+	160977488-160977537	XqF5	Mus musculus ankyrin repeat and SOCS box-containing 9 (Asb9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		1700011M07Rik	1700011M07Rik
Mus musculus	MEEBO	ILMN_184432	ILMN_184432	TTLL4	scl067534.1_34				51705091	XM_129771	Ttll4		ILMN_2486247	002810598	S	9	GTGTGTTTAGAGTCCTCCAGGAGCAGACTGGGGCTGTATGGTAGTTCTAG						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184432	ILMN_184432	TTLL4	scl067534.1_34				51705091	XM_129771	Ttll4		ILMN_1251995	000610195	S	5959	AGTTACCCAGCCTCTGGAGGAAGGCTCCTGAGACAAGGAATAAAGTCGTC						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184432	ILMN_184432	TTLL4	scl067534.1_34				51705091	XM_129771	Ttll4		ILMN_1226517	004250543	S	14	GGAGAGCCATTGGTAGGGATGCGTGTATTGCTGGCAAGGTGCACAGGTCC						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216176	ILMN_216176	KRT2-19	scl064818.1_157	XM_354889.1			38077183	XM_354889.1	Krt2-19		ILMN_1213227	000520725	S	1544	TCACTTTGAAGCGACCCTCTCACTCTAGGCTCCTCTGGTCTCTCTAGACC										
Mus musculus	RefSeq	ILMN_223755	ILMN_223755	RGS7	NM_011880.2	NM_011880.2		24012	141801672	NM_011880.2	Rgs7	NP_036010.1	ILMN_1237219	007000121	S	1749	GGACGCTGTCATTTCATTGCCTTCATCTTCATGTGTCGTCTGCTTCCCTC	1	-	176989662-176989711	1qH3-qH4	Mus musculus regulator of G protein signaling 7 (Rgs7), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_215248	ILMN_215248	CPT2	scl000022.1_12				6753513	NM_009949	Cpt2		ILMN_2775122	001500017	S	2203	CAGCTCTAAAGCCCTTTCTTAAGGAGATCGGGTTGGAAAGCTAACTCAGC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine [goid 4095] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215248	ILMN_215248	CPT2	scl000022.1_12				6753513	NM_009949	Cpt2		ILMN_2775123	003370609	S	2205	GCTCTAAAGCCCTTTCTTAAGGAGATCGGGTTGGAAAGCTAACTCAGCTG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine [goid 4095] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213695	ILMN_213695	SPHK2	NM_203280.2	NM_203280.2		56632	118130964	NM_203280.2	Sphk2	NP_975009.1	ILMN_2639777	006860661	S	217	CTCCGAAGTAGCTGGGATCACCGTCTTTCAACACTTGGCCTGGCTCTGCC	7	-	52972382-52972431	7qB4	Mus musculus sphingosine kinase 2 (Sphk2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol [goid 6669] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence NAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The chemical reactions and pathways involving sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues [goid 6670] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the reaction: ATP + sphinganine = ADP + sphinganine 1-phosphate [goid 8481] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the reaction: sphingosine + ATP = sphingosine 1-phosphate + ADP [goid 17050] [evidence IDA]; Catalysis of the reaction: sphingosine + ATP = sphingosine 1-phosphate + ADP [goid 17050] [evidence IMP]	C76851; MGC102297	C76851; MGC102297
Mus musculus	RefSeq	ILMN_220045	ILMN_240080	BC016423	XM_622100.3	XM_622100.3		105203	94394619	XM_622100.3	BC016423	XP_622100.2	ILMN_2716958	004560068	S	8330	AAGAAACACTACATAGATAAAGAAAATTTTTTGTAAATGACAAATTTTTA	13	-	3565489-3565538		PREDICTED: Mus musculus cDNA sequence BC016423, transcript variant 1 (BC016423), mRNA.					
Mus musculus	RefSeq	ILMN_214802	ILMN_231106	BC042761	XM_977491.1	XM_977491.1		217601	94392870	XM_977491.1	BC042761	XP_982585.1	ILMN_1228332	005220402	S	593	GCAAGTGTGTCAAAGGTACATAGCAAATGTCTGATTGCTCCCTCATGGAT	12	-	58762442-58762458:58762459-58762491	12qC1	PREDICTED: Mus musculus cDNA sequence BC042761 (BC042761), mRNA.					
Mus musculus	RefSeq	ILMN_222099	ILMN_241349	NALP4E	XM_987714.1	XM_987714.1		446099	94381800	XM_987714.1	Nalp4e	XP_992808.1	ILMN_2744549	003060037	S	1156	CGTCGAACTACCTCCAAAGGAAAGAGAGCAGGATCCTTAATTTGATCCAT				7qA3	PREDICTED: Mus musculus NACHT, leucine rich repeat and PYD containing 4E (Nalp4e), mRNA.					
Mus musculus	RefSeq	ILMN_214990	ILMN_252761	4930422I07RIK	XM_918228.3	XM_918228.3		71640	149259760	XM_918228.3	4930422I07Rik	XP_923321.2	ILMN_1228464	000360156	S	1126	GCACGTGGACCAGAAGACACTTTTTATTTATACTCCATGAATATTTCAAA				9qE3.1	PREDICTED: Mus musculus RIKEN cDNA 4930422I07 gene (4930422I07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217530	ILMN_217530	2410018C20RIK	NM_026423.2	NM_026423.2		67873	31541889	NM_026423.2	2410018C20Rik	NP_080699.2	ILMN_2844848	003780066	S	2480	CCTGTGCCACCACCCAGGATCAAACTCAAATAAGCATGGCAGCAAGCATC	8	-	87140302-87140351	8qC3	Mus musculus RIKEN cDNA 2410018C20 gene (2410018C20Rik), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells [goid 44249] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216274	ILMN_261364	4833403I15RIK	XM_911283.2	XM_911283.2		74574	94404866	XM_911283.2	4833403I15Rik	XP_916376.1	ILMN_2669252	002230224	S	1731	GGAGACATTTTCTTACTCAAATGCTGAGCAAGATGACCTGTGGAGACATA				18qC	PREDICTED: Mus musculus RIKEN cDNA 4833403I15 gene (4833403I15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195827	ILMN_236950	2900052P03RIK	XM_994800.1	XM_994800.1		72973	94390869	XM_994800.1	2900052P03Rik	XP_999894.1	ILMN_1240268	006900373	S	657	CAGTGACTAGTGCTCTCTGTTGCTTTGCTTACTTTGAGCAGATACAGCCC	11	-	97670070-97670119	11qD	PREDICTED: Mus musculus RIKEN cDNA 2900052P03 gene, transcript variant 2 (2900052P03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_243489	ILMN_243489	WBP2NL	NM_029066.1	NM_029066.1		74716	117606408	NM_029066.1	Wbp2nl	NP_083342.1	ILMN_3004065	006940500	S	988	CTGCTGGGTCTGAAGCAGGCCATCCCATGTCTGTGGCAGTCCAGAATCCT	15	+	82144658-82144707	15qE1	Mus musculus WBP2 N-terminal like (Wbp2nl), mRNA.	A condensed cytoplasmic structure that covers the nucleus of mammalian spermatozoa except for a narrow zone around the insertion of the tail. It shows two distinct regions, a subacrosomal layer and, continuing caudally beyond the acrosomic system, the postacrosomal sheath. The perinuclear theca has been considered a cytoskeletal scaffold responsible for maintaining the overall architecture of the mature sperm head; however, recent studies indicate that the bulk of its constituent proteins are not traditional cytoskeletal proteins but rather a variety of cytosolic proteins [goid 33011] [evidence ISS]	The process whereby the egg becomes metabolically active, initiates protein and DNA synthesis and undergoes structural changes to its cortex and/or cytoplasm [goid 7343] [evidence ISS]; The conversion at fertilization of the inactive sperm nucleus into a male pronucleus with its chromosomes processed for the first zygotic division [goid 35039] [evidence ISS]; Formation of the haploid nucleus of the unfertilized egg [goid 35038] [evidence ISA]	Interacting selectively with a WW domain of a protein, a small module composed of 40 amino acids and plays a role in mediating protein-protein interactions via proline-rich regions [goid 50699] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	PAWP; 4930521I23Rik	PAWP; 4930521I23Rik
Mus musculus	RefSeq	ILMN_196778	ILMN_196778	IFITM1	NM_026820.2	NM_026820.2		68713	40254488	NM_026820.2	Ifitm1	NP_081096.2	ILMN_1214071	004010019	S	654	CGGCCATCGTCGTCATCGTTGTCTGTGCCATTAGATGATGTGAGATGTCT	7	+	148155488-148155525:148155526-148155537	7qF5	Mus musculus interferon induced transmembrane protein 1 (Ifitm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]		1110036C17Rik; MGC107121; Mil2	1110036C17Rik; MGC107121; Mil2
Mus musculus	RefSeq	ILMN_196778	ILMN_196778	IFITM1	NM_026820.2	NM_026820.2		68713	40254488	NM_026820.2	Ifitm1	NP_081096.2	ILMN_1245129	000450528	S	255	GCACCACATTGACACAGCTGACTTTAGTCTTGTGGACAACGCCTGGATCC	7	+	148153366-148153415	7qF5	Mus musculus interferon induced transmembrane protein 1 (Ifitm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]		1110036C17Rik; MGC107121; Mil2	1110036C17Rik; MGC107121; Mil2
Mus musculus	RefSeq	ILMN_196778	ILMN_196778	IFITM1	NM_026820.2	NM_026820.2		68713	40254488	NM_026820.2	Ifitm1	NP_081096.2	ILMN_2814484	005820068	S	840	TCTGTCCATGGTGGACTCAATAAAGTGCACGCGCTGTGACTTTCAAAAAA	7	+	148155674-148155717	7qF5	Mus musculus interferon induced transmembrane protein 1 (Ifitm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]		1110036C17Rik; MGC107121; Mil2	1110036C17Rik; MGC107121; Mil2
Mus musculus	RefSeq	ILMN_196778	ILMN_196778	IFITM1	NM_026820.2	NM_026820.2		68713	40254488	NM_026820.2	Ifitm1	NP_081096.2	ILMN_1217180	005960577	S	481	CTGGTCCCTGTTCAATACACTCTTCATGAACTTCTGCTGCCTGGGCTTCG	7	+	148154265-148154314	7qF5	Mus musculus interferon induced transmembrane protein 1 (Ifitm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]		1110036C17Rik; MGC107121; Mil2	1110036C17Rik; MGC107121; Mil2
Mus musculus	RefSeq	ILMN_196778	ILMN_196778	IFITM1	NM_026820.2	NM_026820.2		68713	40254488	NM_026820.2	Ifitm1	NP_081096.2	ILMN_2640765	005130332	S	325	AGTCATTTTAGGGCTCCTCGACCACACCTCTTCAAAAGCCGAGAGATGCC	7	+	148153436-148153465:148154139-148154154:148154155-148154158	7qF5	Mus musculus interferon induced transmembrane protein 1 (Ifitm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]		1110036C17Rik; MGC107121; Mil2	1110036C17Rik; MGC107121; Mil2
Mus musculus	RefSeq	ILMN_208838	ILMN_208838	2700038C09RIK	NM_025598.1	NM_025598.1		66496	21313439	NM_025598.1	2700038C09Rik	NP_079874.1	ILMN_2894984	004120068	S	400	GCCACTGGTGGGCCAGCTTCTTTTTCGGGAAATCCACACTCCCGTTCATG	2	+	181117433-181117482	2qH4	Mus musculus RIKEN cDNA 2700038C09 gene (2700038C09Rik), mRNA.				2610317A05Rik; 0610012G23Rik; 3110053G12Rik	2610317A05Rik; 0610012G23Rik; 3110053G12Rik
Mus musculus	RefSeq	ILMN_234218	ILMN_234218	TRPC3	NM_019510.1	NM_019510.1		22065	9507206	NM_019510.1	Trpc3	NP_062383.1	ILMN_3001313	000060347	S	2873	GTAGGTGCTTGGTGAATGTGAAACCAAATGGCCGTCCAGCCAGTTGCATC	3	-	36543189-36543238	3qB	Mus musculus transient receptor potential cation channel, subfamily C, member 3 (Trpc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC124333; Trp3; Trrp3	MGC124333; Trp3; Trrp3
Mus musculus	RefSeq	ILMN_199830	ILMN_199830	LOC383066	XM_356835.1	XM_356835.1			38077725	XM_356835.1	LOC383066		ILMN_1217550	002940021	S	78	GCAAGGCTATGTGGAGACTTGCACACCCCAGGCCCACATCCAGTTTATCA										
Mus musculus	RefSeq	ILMN_221667	ILMN_221667	HPCAL1	NM_016677.1	NM_016677.1		53602	7949054	NM_016677.1	Hpcal1	NP_057886.1	ILMN_2789089	004890735	S	1082	GGCGGCCCTTAAGGACACCAGACAGGACTTTTCAGTATCTTACCAAGACC	12	+	17816927-17816976	12qA1.1-qA1.2	Mus musculus hippocalcin-like 1 (Hpcal1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	VILIP3; Vsnl3; Nvp3; Vnsl3; NVP-3	VILIP3; Vsnl3; Nvp3; Vnsl3; NVP-3
Mus musculus	Riken	ILMN_202756	ILMN_202756	2700007P21RIK	ri|2700007P21|ZX00062H06|AK012215|1912					AK012215	2700007P21Rik		ILMN_2552047	003850215	S	1726	GTGTTCCTCTCAGGCATATCTCCAGGACCCAGCATTATGTGAAGTTCGTC										
Mus musculus	RefSeq	ILMN_219838	ILMN_219838	UGT2A3	NM_028094.1	NM_028094.1		72094	13386283	NM_028094.1	Ugt2a3	NP_082370.1	ILMN_2982764	003710040	S	1768	CTACTGATTAGTTCCAATCTTCTATCTTGTAGGCATTCTCCTCTCACTCT	5	-	88399813-88399862	5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide A3 (Ugt2a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	2010321J07Rik	2010321J07Rik
Mus musculus	RefSeq	ILMN_199059	ILMN_231953	ANKS1B	XM_001003400.2	XM_001003400.2		77531	149261107	XM_001003400.2	Anks1b	XP_001003400.1	ILMN_1236073	004040168	S	2258	GGTGACCAATGGGGTGTGAATCCAGGGGGCTTTGTGGAGAGAGCATGTAC	10	+	89973679-89973728	10qC2	PREDICTED: Mus musculus ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant 2 (Anks1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]				
Mus musculus	RefSeq	ILMN_188555	ILMN_231953	ANKS1B	XM_001003400.2	XM_001003400.2		77531	149261107	XM_001003400.2	Anks1b	XP_001003400.1	ILMN_2453670	004150372	S	3149	GGCGATGCAAGGAGGAGAAGAAATGAAAACTACTTTGATGATATTCCCCG	10	+	90360094-90360143	10qC2	PREDICTED: Mus musculus ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant 2 (Anks1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]				
Mus musculus	RefSeq	ILMN_217112	ILMN_260304	1700013H16RIK	XM_914306.3	XM_914306.3		75514	149271328	XM_914306.3	1700013H16Rik	XP_919399.1	ILMN_1218319	007320639	S	921	AAAATTTTGAGAGAATCTGAGGAGTCTACGCTCTTTTGATGGGAAGAATA				XqA5	PREDICTED: Mus musculus RIKEN cDNA 1700013H16 gene (1700013H16Rik), mRNA.					
Mus musculus	Riken	ILMN_202278	ILMN_202278	1700096C12RIK	ri|1700096C12|ZX00077B06|AK007090|680					AK007090	1700096C12Rik		ILMN_2548352	003290255	S	599	TACCACTTGGAGTTGAGCAAAAACTGAGCCCGTGGAGGCTATCAGGAGCC										
Mus musculus	RefSeq	ILMN_211431	ILMN_211431	CSTF3	NM_145529.2	NM_145529.2		228410	133892648	NM_145529.2	Cstf3	NP_663504.1	ILMN_2615837	001010465	S	2705	GTCCTGCCTTACTGTTTGTTTTTATTTATGGCAGAATGTATGGCGACTGT	2	+	104505474-104505523	2qE2	Mus musculus cleavage stimulation factor, 3' pre-RNA, subunit 3 (Cstf3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC6373; 4732468G05Rik; C79532	MGC6373; 4732468G05Rik; C79532
Mus musculus	RefSeq	ILMN_216481	ILMN_216481	SMAD1	NM_008539.3	NM_008539.3		17125	42476186	NM_008539.3	Smad1	NP_032565.2	ILMN_1234354	006650731	S	117	AGCTAAGCAGAGCGCGGGGACGGCGGCCGGGAGCGGATCGGAGCACGGGA	8	-	81923201-81923250	8qC2	Mus musculus MAD homolog 1 (Drosophila) (Smad1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence TAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone [goid 2051] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; The process by which a cell becomes committed to become part of the mesoderm [goid 1710] [evidence IGI]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12151307] [evidence IEP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 12151307] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]	Madr1; Madh1; AI528653; Mlp1; MusMLP	Madr1; Madh1; AI528653; Mlp1; MusMLP
Mus musculus	RefSeq	ILMN_216481	ILMN_216481	SMAD1	NM_008539.3	NM_008539.3		17125	42476186	NM_008539.3	Smad1	NP_032565.2	ILMN_2671572	001660309	S	2632	GTGAGAGCAGATGAGTAATTCCTTCTGTTCGCAAATCAACTGGCTTCGTG	8	-	81862661-81862710	8qC2	Mus musculus MAD homolog 1 (Drosophila) (Smad1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence TAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone [goid 2051] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; The process by which a cell becomes committed to become part of the mesoderm [goid 1710] [evidence IGI]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12151307] [evidence IEP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 12151307] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]	Madr1; Madh1; AI528653; Mlp1; MusMLP	Madr1; Madh1; AI528653; Mlp1; MusMLP
Mus musculus	RefSeq	ILMN_186880	ILMN_216481	SMAD1	NM_008539.3	NM_008539.3		17125	42476186	NM_008539.3	Smad1	NP_032565.2	ILMN_2439293	005810220	S	159	CTCCGATCCGCTCCCGGCCGCCGTCCCCGCGCTCTGCTTAGCTCCGGGCC	8	-	81923159-81923208	8qC2	Mus musculus MAD homolog 1 (Drosophila) (Smad1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence TAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone [goid 2051] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; The process by which a cell becomes committed to become part of the mesoderm [goid 1710] [evidence IGI]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12151307] [evidence IEP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 12151307] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]	Madr1; Madh1; AI528653; Mlp1; MusMLP	Madr1; Madh1; AI528653; Mlp1; MusMLP
Mus musculus	RefSeq	ILMN_216481	ILMN_216481	SMAD1	NM_008539.3	NM_008539.3		17125	42476186	NM_008539.3	Smad1	NP_032565.2	ILMN_2953700	000380014	S	2939	TTCTCCTTTGCTCTTATACAGCGAGTACTTTTATTCCAACACTAGCAGGG	8	-	81862354-81862403	8qC2	Mus musculus MAD homolog 1 (Drosophila) (Smad1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence TAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone [goid 2051] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; The process by which a cell becomes committed to become part of the mesoderm [goid 1710] [evidence IGI]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12151307] [evidence IEP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 12151307] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]	Madr1; Madh1; AI528653; Mlp1; MusMLP	Madr1; Madh1; AI528653; Mlp1; MusMLP
Mus musculus	RefSeq	ILMN_212109	ILMN_212109	FKBP10	NM_010221.1	NM_010221.1		14230	6806906	NM_010221.1	Fkbp10	NP_034351.1	ILMN_1215085	006650504	S	2161	TAGGCACGGCAAGGGTGAGCTTCTTGGTCCTTCACTTTCCCAGACGTGCC	11	+	100285715-100285764	11qD	Mus musculus FK506 binding protein 10 (Fkbp10), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fkbp6; AI325255; Fkbp-rs1; FKBP65; Fkbp1-rs; 65kDa	Fkbp6; AI325255; Fkbp-rs1; FKBP65; Fkbp1-rs; 65kDa
Mus musculus	RefSeq	ILMN_211305	ILMN_313534	LOC100048645	XM_001480791.1	XM_001480791.1		100048645	149249689	XM_001480791.1	LOC100048645	XP_001480841.1	ILMN_2635167	003870608	S	2544	CCTCACGAAGCTGCTTCCTGTGTTGCACATGTGGAGTTGGACTACAGGTA					PREDICTED: Mus musculus similar to cysteine and glycine-rich protein 2 binding protein (LOC100048645), mRNA.					
Mus musculus	RefSeq	ILMN_223683	ILMN_246722	S100A7A	NM_199422.1	NM_199422.1		381493	40786530	NM_199422.1	S100a7a	NP_955454.1	ILMN_1230080	002260133	S	369	AAGGACTACCATCTCCAGTTCCACCGGCAGTTGTGTGCACACTACTGTAC	3	+	90461680-90461729	3qF1	Mus musculus S100 calcium binding protein A7A (S100a7a), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC130261; Gm1020; S100a15; S100A7f; S100A7L1; AY465109; S100a17l1; MGC130262	MGC130261; Gm1020; S100a15; S100A7f; S100A7L1; AY465109; S100a17l1; MGC130262
Mus musculus	RefSeq	ILMN_260271	ILMN_260271	HABP4	NM_019986.1	NM_019986.1		56541	9910299	NM_019986.1	Habp4	NP_064370.1	ILMN_2841280	000630653	S	1960	CTCCCCACCCCCCTCAACACTAGTGTTGGAATTCAGCACTGTGGACTCTG	13	+	64195206-64195255	13qB3	Mus musculus hyaluronic acid binding protein 4 (Habp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence ISA]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence ISA]	4933428J01Rik; 4933413D03Rik	4933428J01Rik; 4933413D03Rik
Mus musculus	RefSeq	ILMN_184611	ILMN_184611	TUBG1	NM_134024.2	NM_134024.2		103733	118129919	NM_134024.2	Tubg1	NP_598785.1	ILMN_2420070	004860437	S	1456	TTAGCCCAGGCCCTGCCAGGCTGACTTCCCCTCGGAGCACAGATCAGGGA	11	+	100987580-100987629	11qD	Mus musculus tubulin, gamma 1 (Tubg1), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence IDA]; A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IDA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell [goid 7020] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle [goid 7052] [evidence TAS]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle [goid 212] [pmid 15007207] [evidence IEP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]	AI451582; AI503389; Tubg; MGC8041; 1500010O08Rik	AI451582; AI503389; Tubg; MGC8041; 1500010O08Rik
Mus musculus	RefSeq	ILMN_200296	ILMN_200296	LOC386161	XM_359100.1	XM_359100.1			38081250	XM_359100.1	LOC386161		ILMN_1257961	003780209	S	3720	GAACAAATTTCCTGGACAGATACCAGACACAACACCTTTTGGGTCAAAGG										
Mus musculus	Riken	ILMN_203045	ILMN_203045	A030001A03RIK	ri|A030001A03|PX00063C03|AK037143|2930					AK037143	A030001A03Rik		ILMN_1233811	002030647	S	2617	GCCAAAAGGGCCTCAGGACTTCAGTAGAGCCAAAGTAGGATGGAGCAGGG										
Mus musculus	RefSeq	ILMN_214000	ILMN_214000	DHX32	NM_133941.2	NM_133941.2		101437	114326536	NM_133941.2	Dhx32	NP_598702.1	ILMN_2643150	001990037	S	2671	CTCTCCCAACATAGTGCAACACGGACACTGCAACAGGAGCTGCCGAAGCC	7	-	140912859-140912908	7qF3	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 32 (Dhx32), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Ddx32; 4732469F02Rik; AA408140; 3110079L04Rik	Ddx32; 4732469F02Rik; AA408140; 3110079L04Rik
Mus musculus	RefSeq	ILMN_195886	ILMN_195886	VWF	NM_011708.3	NM_011708.3		22371	115511021	NM_011708.3	Vwf	NP_035838.3	ILMN_2519673	007510414	S	8628	GGTCATCAACGCCATGCAGTGCAGGTGTTCTCCCCGGAACTGCAGCAAGT	6	+	125636506-125636555	6qF3	Mus musculus Von Willebrand factor homolog (Vwf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IMP]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IMP]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IMP]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence TAS]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IMP]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protease or peptidase [goid 2020] [evidence ISO]	C630030D09; F8VWF; AI551257; 6820430P06Rik; VWD; B130011O06Rik	C630030D09; F8VWF; AI551257; 6820430P06Rik; VWD; B130011O06Rik
Mus musculus	MEEBO	ILMN_216568	ILMN_216568	MYH9	scl0002511.1_1272	NM_022410.1			20137005	NM_022410.1	Myh9		ILMN_2672626	004150541	S	7200	GTCCCAAAGGCGCTGTCATAAAGGAGCAAGTGGGACCCGCACCCCTTTTT						An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence ISO]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISO]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence ISO]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a uropod, a rigid membrane projection with related cytoskeletal components at the trailing edge of a lymphocyte or other cell in the process of migrating or being activated [goid 32796] [evidence IMP]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IMP]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence ISO]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Progression through metaphase of meiosis I; analogous to mitotic metaphase [goid 7132] [evidence IDA]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]; The directed orientation of T cell signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with antigen presenting cell [goid 1768] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The cell cycle process whereby the directed movement of the meiotic spindle to a specific location in the cell occurs [goid 51295] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle [goid 212] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]	Interacting selectively with ADP, adenosine 5'-diphosphate [goid 43531] [evidence ISO]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of an actin filament to accelerate release of ADP and phosphate [goid 30898] [evidence ISO]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of an actin filament to accelerate release of ADP and phosphate [goid 30898] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198292	ILMN_198292	LOC193690	XM_111637.4	XM_111637.4			38083678	XM_111637.4	LOC193690		ILMN_1245362	002490438	S	1142	ACGCCCCATCGGGAGGGTATTCAGCTAAAGCAAAAAATATCATGGCAAAG										
Mus musculus	RefSeq	ILMN_215454	ILMN_215454	FOXH1	NM_007989.1	NM_007989.1		14106	6679844	NM_007989.1	Foxh1	NP_032015.1	ILMN_2968632	007150678	S	1035	AGCTTACTGGAGCGTAGGCACTGAATCCCAAGGGTCCCAGGACCTGCTCT	15	-	76495685-76495734	15qD3	Mus musculus forkhead box H1 (Foxh1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A transcriptionally active complex that binds to an activin response element (ARE) in the promoter of target genes, and is composed of two SMAD2 proteins, one SMAD4 protein and a Forkhead activin signal transducer (FAST) transcription factor [goid 32444] [evidence IDA]	The process whose specific outcome is the progression of the axial mesoderm over time, from its formation to the mature structure. The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord [goid 48318] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The establishment, maintenance and elaboration of cell differentiation that results in the anterior/posterior subdivision of the embryonic heart tube. In Drosophila this results in subdivision of the dorsal vessel into to the posterior heart proper and the anterior aorta [goid 35054] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Fast2	Fast2
Mus musculus	RefSeq	ILMN_256666	ILMN_256666	GM767	NM_001033418.1	NM_001033418.1		330470	85701922	NM_001033418.1	Gm767	NP_001028590.1	ILMN_2914870	006580598	S	385	GCACAGAGGATGGAGAGGTGTTTGGGAAAAAGTGGTGTTCACTCACCCCA	7	+	12373191-12373240	7qA1	Mus musculus gene model 767, (NCBI) (Gm767), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Bsph1	Bsph1
Mus musculus	RefSeq	ILMN_185528	ILMN_323701	4631424J17RIK	XM_001481283.1	XM_001481283.1		70802	149262049	XM_001481283.1	4631424J17Rik	XP_001481333.1	ILMN_2588040	005810709	I	340	AAGCTCTTCTCCGGGGTCCTCATGGACCTATCCAAAAGGTTTGGGCCCCA				11qB1.1	PREDICTED: Mus musculus RIKEN cDNA 4631424J17 gene (4631424J17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_208978	ILMN_208978	CNO	NM_133724.3	NM_133724.3		117197	125988412	NM_133724.3	Cno	NP_598485.1	ILMN_2591411	001300528	S	1163	TGGGCGTTTTGTTGCAGGGAGTCCTGAAGTTGTATTTGACAGTTTGACTG	5	-	37138706-37138755	5qB3	Mus musculus cappuccino (Cno), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2610101N07Rik	2610101N07Rik
Mus musculus	RefSeq	ILMN_210546	ILMN_210546	DHX57	NM_198942.1	NM_198942.1		106794	39573733	NM_198942.1	Dhx57	NP_945180.1	ILMN_2617925	002260131	S	4541	GCCAGGGCCCCACAACCCAAGAGACAGTCTCCACACTGGTGTTTCTGAAA	17	-	80637971-80638020	17qE3	Mus musculus DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 (Dhx57), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	MGC77974; AW494914	MGC77974; AW494914
Mus musculus	RefSeq	ILMN_210546	ILMN_210546	DHX57	NM_198942.1	NM_198942.1		106794	39573733	NM_198942.1	Dhx57	NP_945180.1	ILMN_1229304	007400041	S	603	GGGATGATGGCGATGACTTTTGTGTCTTCACTGAGCCCAAGCGCCCGTCC	17	-	80680537-80680586	17qE3	Mus musculus DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 (Dhx57), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	MGC77974; AW494914	MGC77974; AW494914
Mus musculus	RefSeq	ILMN_237072	ILMN_237072	GLRX2	NM_001038593.1	NM_001038593.1		69367	84370331	NM_001038593.1	Glrx2	NP_001033682.1	ILMN_3096267	002140392	A	3157	GGCTTGTGGGAAACAAGAGGATGTGTGGTACATAATTCTTGGTTAGGGTC	1	+	145596459-145596508	1qF	Mus musculus glutaredoxin 2 (thioltransferase) (Glrx2), transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	1700010P22Rik; AI645710; Grx2	1700010P22Rik; AI645710; Grx2
Mus musculus	RefSeq	ILMN_237072	ILMN_237072	GLRX2	NM_001038593.1	NM_001038593.1		69367	84370331	NM_001038593.1	Glrx2	NP_001033682.1	ILMN_3023749	005560121	I	34	TGAATGCGGGCGTGAGGAGCTCGGGAGAACTCGGTAGAGATCGGAAGAAC	1	+	145586512-145586561	1qF	Mus musculus glutaredoxin 2 (thioltransferase) (Glrx2), transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	1700010P22Rik; AI645710; Grx2	1700010P22Rik; AI645710; Grx2
Mus musculus	RefSeq	ILMN_248741	ILMN_248741	OTTMUSG00000005148	NM_001037928.3	NM_001037928.3		626870	146198520	NM_001037928.3	OTTMUSG00000005148	NP_001033017.1	ILMN_3160244	005090019	S	1603	TTTCTTACATTCCTCTGCAATGGCCTGGCTGGCCTGGTGACCTCTAGGAC				11qA1	Mus musculus predicted gene, OTTMUSG00000005148 (OTTMUSG00000005148), mRNA.					
Mus musculus	RefSeq	ILMN_221403	ILMN_240868	PPRC1	NM_001081214.1	NM_001081214.1		226169	124487054	NM_001081214.1	Pprc1	NP_001074683.1	ILMN_2735118	005550092	S	4772	GCATTTGCAGCCATTGAGAGTGGCCACAAGTTGCGGCAGGCAGACGAGCA	19	+	46138220-46138269	19qC3	Mus musculus peroxisome proliferative activated receptor, gamma, coactivator-related 1 (Pprc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PRC; A930018M19; mKIAA0595; MGC12121; BC013720	PRC; A930018M19; mKIAA0595; MGC12121; BC013720
Mus musculus	RefSeq	ILMN_222829	ILMN_222829	BCORL1	NM_178782.4	NM_178782.4		320376	125347763	NM_178782.4	Bcorl1	NP_848897.3	ILMN_2755424	002360682	S	5879	GGCACCAGGGTCCCTTGGACTGGCTTCTACACTTCTGACCAAGACCAAAC	X	+	45759659-45759708	XqA4	Mus musculus BCL6 co-repressor-like 1 (Bcorl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		6720425J07Rik; B930011H20Rik	6720425J07Rik; B930011H20Rik
Mus musculus	RefSeq	ILMN_222829	ILMN_222829	BCORL1	NM_178782.4	NM_178782.4		320376	125347763	NM_178782.4	Bcorl1	NP_848897.3	ILMN_3067548	004180544	I	4670	TCACCCACTGCCCGACAGATTCCCCCAGAGGCACGGAGACTTATAGTGAA	X	+	45742373-45742422	XqA4	Mus musculus BCL6 co-repressor-like 1 (Bcorl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		6720425J07Rik; B930011H20Rik	6720425J07Rik; B930011H20Rik
Mus musculus	RefSeq	ILMN_213606	ILMN_239525	ANKRD27	NM_145633.3	NM_145633.3		245886	125988392	NM_145633.3	Ankrd27	NP_663608.3	ILMN_2638866	005870672	S	3007	CCAGGGAGACTATGGGAAGGGATAGAAGTGTGCCCGATCTTGCAGGACGT	7	+	36421560-36421609	7qB2	Mus musculus ankyrin repeat domain 27 (VPS9 domain) (Ankrd27), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]	The directed movement of substances, in membrane-bounded vesicles, from the early sorting endosomes to the late sorting endosomes; transport occurs along microtubules and can be experimentally blocked with microtubule-depolymerizing drugs [goid 45022] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]	MGC25907; BC016493; Varp; D330003H11Rik; AA408090	MGC25907; BC016493; Varp; D330003H11Rik; AA408090
Mus musculus	RefSeq	ILMN_213606	ILMN_239525	ANKRD27	NM_145633.3	NM_145633.3		245886	125988392	NM_145633.3	Ankrd27	NP_663608.3	ILMN_2738481	001170601	S	3000	AGGACATCCAGGGAGACTATGGGAAGGGATAGAAGTGTGCCCGATCTTGC	7	+	36421553-36421602	7qB2	Mus musculus ankyrin repeat domain 27 (VPS9 domain) (Ankrd27), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]	The directed movement of substances, in membrane-bounded vesicles, from the early sorting endosomes to the late sorting endosomes; transport occurs along microtubules and can be experimentally blocked with microtubule-depolymerizing drugs [goid 45022] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]	MGC25907; BC016493; Varp; D330003H11Rik; AA408090	MGC25907; BC016493; Varp; D330003H11Rik; AA408090
Mus musculus	Riken	ILMN_204422	ILMN_204422	A330072G01RIK	ri|A330072G01|PX00132F15|AK039610|1538					AK039610	A330072G01Rik		ILMN_1249774	003450767	S	1195	CTGCAGGCTGGCCTTGAACCTACAGCGCCACATTGTCCCTCCATACATGG										
Mus musculus	Riken	ILMN_206922	ILMN_206922	A630059F13RIK	ri|A630059F13|PX00146B14|AK080344|1875					AK080344	A630059F13Rik		ILMN_2583710	006980095	S	1763	GTGGACTTTTTAGCCTGGTTGTTCCATGGGTCTGCGAGTAAGCAGCCGGC										
Mus musculus	Riken	ILMN_202822	ILMN_202822	9030619K07RIK	ri|9030619K07|PX00061E15|AK033556|1473					AK033556	9030619K07Rik		ILMN_1249908	004900678	S	1298	TGTGTGTGTGAGTGTGTGAGACAGACAGAAGGGCCCAGGCTGTGGGGTTC										
Mus musculus	RefSeq	ILMN_190534	ILMN_190534	TTPA	NM_015767.1	NM_015767.1		50500	33468962	NM_015767.1	Ttpa	NP_056582.1	ILMN_2470983	007000431	S	6	TTAGCCGTTATCCGAATGTTGGTTCTGTTGTTTAGGTGCAGGTGCTTTCC	4	+	19935580-19935586:19935587-19935629	4qA3	Mus musculus tocopherol (alpha) transfer protein (Ttpa), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The chemical reactions and pathways involving vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant [goid 42360] [evidence IMP]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant [goid 8431] [evidence TAS]		
Mus musculus	RefSeq	ILMN_198008	ILMN_323332	LOC631105	XM_001472569.1	XM_001472569.1		631105	149254184	XM_001472569.1	LOC631105	XP_001472619.1	ILMN_2588071	002760273	S	525	TTCCAGAAGCCCCGCATGAGTGCAGCAAGGGGTGACTCCAACTTCCAGAA				5qE1	PREDICTED: Mus musculus similar to SAC3/GANP family protein (LOC631105), mRNA.					
Mus musculus	RefSeq	ILMN_209821	ILMN_209821	GDI1	NM_010273.1	NM_010273.1		14567	33859559	NM_010273.1	Gdi1	NP_034403.1	ILMN_2862760	002230010	S	2339	TGTCCCCTTCCCCAAGCTCTAGTATATTTCACAGAAAACAAAAACCTCCC	X	+	70564513-70564562	XqA7.3	Mus musculus guanosine diphosphate (GDP) dissociation inhibitor 1 (Gdi1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]	MGC21593; GDIA; GDIalpha	MGC21593; GDIA; GDIalpha
Mus musculus	RefSeq	ILMN_214222	ILMN_310585	LOC433745	XM_001475733.1	XM_001475733.1		433745	149252851	XM_001475733.1	LOC433745	XP_001475783.1	ILMN_2645672	006450719	S	944	ACGTCGGGCCCTGGAGAAGATTGACCTGAAGTTCATTGACACCACCTCCA	4	-	112627774-112627823	4qD1	PREDICTED: Mus musculus similar to ribosomal protein L3 (LOC433745), mRNA.					
Mus musculus	MEEBO	ILMN_195764	ILMN_195764	PLA2G12A	scl22624.5_378				24475672	NM_023196	Pla2g12a		ILMN_2518483	005720689	S	7	GGGATGTGCACAGAATTCAGAAGCCCAGCTTCCTCAAACCGCTTAGAGCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IDA]		
Mus musculus	RefSeq	ILMN_198533	ILMN_198533	LOC331380	XM_285439.2	XM_285439.2			38086062	XM_285439.2	LOC331380		ILMN_2532023	000270519	S	603	CCATCGAGAGCAGATCGCCTGCCAAGCGTACACCACAAAGATTTTCGTGA										
Mus musculus	RefSeq	ILMN_216729	ILMN_216729	MMP1A	NM_032006.2	NM_032006.2		83995	31981426	NM_032006.2	Mmp1a	NP_114395.1	ILMN_3156019	006380427	A	582	CTATAAGCTTGCTCACACTTTCCAGCCAGGCCCAGGTTTGGGGGGTGATG	9	+	7465587-7465636	9qA1	Mus musculus matrix metallopeptidase 1a (interstitial collagenase) (Mmp1a), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Mcol-A; Mcola	Mcol-A; Mcola
Mus musculus	RefSeq	ILMN_216729	ILMN_216729	MMP1A	NM_032006.2	NM_032006.2		83995	31981426	NM_032006.2	Mmp1a	NP_114395.1	ILMN_3077034	004850433	I	4	TGGAGCAGGCAGGAAGGAGGCCACTGGTGATTTTGCCCAGAGAAAAGCTT	9	+	7464144-7464193	9qA1	Mus musculus matrix metallopeptidase 1a (interstitial collagenase) (Mmp1a), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Mcol-A; Mcola	Mcol-A; Mcola
Mus musculus	Riken	ILMN_206325	ILMN_206325	NEO1	ri|D330021F23|PX00191H21|AK084609|3642					AK084609	Neo1		ILMN_2579266	001410438	S	3352	CGTCTGGGTTTGCATACTTTGTGAGGAATGCCATAGTGTTGGGTTTTGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IPI]		
Mus musculus	RefSeq	ILMN_213264	ILMN_213264	SHCBP1	NM_011369.1	NM_011369.1		20419	6755507	NM_011369.1	Shcbp1	NP_035499.1	ILMN_3004376	005340561	S	1879	GCCGGATGAAGAAAAGACTGAGTGAACTTGGGATTACACAAGCTGATGAC	8	-	4736183-4736232	8qA1.1	Mus musculus Shc SH2-domain binding protein 1 (Shcbp1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence IDA]	mPAL	mPAL
Mus musculus	RefSeq	ILMN_219826	ILMN_219826	2610027C15RIK	NM_172145.2	NM_172145.2		230752	30841029	NM_172145.2	2610027C15Rik	NP_742157.1	ILMN_2890357	005560494	S	1182	GTACTGGATATGGGACTGCCTCAGGGCCTTCAAAAAACTGCCTCTGCCCC	4	+	125651997-125652046	4qD2.2	Mus musculus RIKEN cDNA 2610027C15 gene (2610027C15Rik), mRNA.				MGC36197	MGC36197
Mus musculus	MEEBO	ILMN_211322	ILMN_211322	5730406M06RIK	scl0002695.1_712	XM_283936.2			38078092	XM_283936.2	5730406M06Rik		ILMN_1228707	001440554	S	2905	CGATCGCGCTCCCTGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCG										
Mus musculus	RefSeq	ILMN_211934	ILMN_211934	SGCA	NM_009161.3	NM_009161.3		20391	145966913	NM_009161.3	Sgca	NP_033187.1	ILMN_1248215	006200494	S	1347	TTCGTACAGGAGAGCGGTTACCTCCCCGAGTAGACAGCGCACAGATGCCT				11qD	Mus musculus sarcoglycan, alpha (dystrophin-associated glycoprotein) (Sgca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	59kDa; Asg; 50DAG; adhalin	59kDa; Asg; 50DAG; adhalin
Mus musculus	RefSeq	ILMN_211934	ILMN_211934	SGCA	NM_009161.3	NM_009161.3		20391	145966913	NM_009161.3	Sgca	NP_033187.1	ILMN_1222601	001260162	S	502	CTATAACCCTGGCTTCCTCTACGGCTCCCCCACTCCAGAAGATCGTGGGT				11qD	Mus musculus sarcoglycan, alpha (dystrophin-associated glycoprotein) (Sgca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	59kDa; Asg; 50DAG; adhalin	59kDa; Asg; 50DAG; adhalin
Mus musculus	Riken	ILMN_201854	ILMN_201854	3830414F09RIK	ri|3830414F09|PX00007O22|AK014438|1520					AK014438	3830414F09Rik		ILMN_1213161	002450240	S	1262	GGCAAGGCAAGTCCTCCACCACTGTTGAACACCCCAACCAGTGAGAACTG										
Mus musculus	RefSeq	ILMN_199556	ILMN_199556	LOC383631	XM_357165.1	XM_357165.1			38074299	XM_357165.1	LOC383631		ILMN_2535649	004210017	S	85	GGTGTGCAGCAGAAGGGCTGTTTCTTGATCCCTTTGCCTTGGCATCTCAG										
Mus musculus	RefSeq	ILMN_215912	ILMN_228672	KLF1	NM_010635.1	NM_010635.1		16596	6754453	NM_010635.1	Klf1	NP_034765.1	ILMN_2665087	007570553	S	1421	CTGGACGCAGATGGACTGGGGTGAGATTTCCTAAGATCTAGAAGGGAGCT	8	+	87429081-87429130	8qC3	Mus musculus Kruppel-like factor 1 (erythroid) (Klf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	Eklf	Eklf
Mus musculus	Riken	ILMN_207446	ILMN_207446	D730019E11RIK	ri|D730019E11|PX00673D02|AK085703|3858					AK085703	D730019E11Rik		ILMN_2587659	004890403	S	3643	TGGAGTTACAGGCAGACGTGGGCCGACACGTGGGTGCTGGGATTTGAACC										
Mus musculus	RefSeq	ILMN_221666	ILMN_221666	TXNDC12	NM_025334.3	NM_025334.3		66073	118130370	NM_025334.3	Txndc12	NP_079610.1	ILMN_1255473	000510092	S	1143	GAAACTCTCAAGTCTGCAAACCCTACATGAAGCCATTTTGTCAATTCACC	4	+	108534593-108534642	4qC7	Mus musculus thioredoxin domain containing 12 (endoplasmic reticulum) (Txndc12), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 glutathione + protein-disulfide = oxidized glutathione + protein-dithiol [goid 19153] [evidence IEA]	0610040B21Rik; ERp19	0610040B21Rik; ERp19
Mus musculus	RefSeq	ILMN_237449	ILMN_237449	KCNQ2	NM_001006678.1	NM_001006678.1		16536	54873655	NM_001006678.1	Kcnq2	NP_001006679.1	ILMN_3140473	004070196	A	711	CCACATCTGCGCTTCGGAGCTTGCGGTTCTTGCAAATCTTGCGGATGATC	2	-	180847830-180847879	2qH4	Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 10, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	HNSPC; KQT2	HNSPC; KQT2
Mus musculus	RefSeq	ILMN_217587	ILMN_217587	DPEP3	NM_027960.2	NM_027960.2		71854	142369401	NM_027960.2	Dpep3	NP_082236.1	ILMN_2685120	002060746	S	1464	GATACACACCTGAAGGTGACAAAGCTGCCAAACATCCTCCAGAGAGCCTC	8	-	108497587-108497636	8qD3	Mus musculus dipeptidase 3 (Dpep3), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	MBD-3; 1700018F16Rik; AI507039	MBD-3; 1700018F16Rik; AI507039
Mus musculus	Riken	ILMN_206874	ILMN_206874	D930039D09RIK	ri|D930039D09|PX00203G18|AK086589|3422					AK086589	D930039D09Rik		ILMN_2583336	006660170	S	3110	GGAATTGAGTATGGTAGCACATGTCTGTAGTCCTAGCACTCAGGAGGCAG										
Mus musculus	RefSeq	ILMN_200398	ILMN_200398	LOC381691	XM_355666.1	XM_355666.1			38081602	XM_355666.1	LOC381691		ILMN_2538615	002600681	S	321	CAGGACCCGTGTGAAGACTCTGGCTATGGACACCATCCTGGCCAACGCTA										
Mus musculus	RefSeq	ILMN_212893	ILMN_212893	TWF2	NM_011876.3	NM_011876.3		23999	133891654	NM_011876.3	Twf2	NP_036006.1	ILMN_1234388	006520739	S	1356	TGGACCAGCACTGTGTGACCTTGCCCTGTCACTGTCCCTGCCTCTCATCT	9	+	106117480-106117529	9qF1	Mus musculus twinfilin, actin-binding protein, homolog 2 (Drosophila) (Twf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with protein kinase C [goid 5080] [evidence ISA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISA]	Ptk9l; Ptk9r; AU014993; A6-related	Ptk9l; Ptk9r; AU014993; A6-related
Mus musculus	RefSeq	ILMN_218794	ILMN_218794	CSNK1D	NM_027874.2	NM_027874.2		104318	76496488	NM_027874.2	Csnk1d	NP_082150.1	ILMN_2746075	006520220	S	403	CGGACATTGCTGCGGGAGAAGAAGTTGCCATCAAGCTTGAATGTGTCAAA	11	-	120844604-120844653	11qE2	Mus musculus casein kinase 1, delta (Csnk1d), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D930010H05Rik; 1200006A05Rik; AA409348	D930010H05Rik; 1200006A05Rik; AA409348
Mus musculus	RefSeq	ILMN_218794	ILMN_218794	CSNK1D	NM_027874.2	NM_027874.2		104318	76496488	NM_027874.2	Csnk1d	NP_082150.1	ILMN_1231035	005550360	S	1962	GACCTGCGCTCCCTGATGATCCCACCGCAGCTACCAGTCTTCTACTTGGT	11	-	120824792-120824841	11qE2	Mus musculus casein kinase 1, delta (Csnk1d), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D930010H05Rik; 1200006A05Rik; AA409348	D930010H05Rik; 1200006A05Rik; AA409348
Mus musculus	RefSeq	ILMN_218794	ILMN_218794	CSNK1D	NM_027874.2	NM_027874.2		104318	76496488	NM_027874.2	Csnk1d	NP_082150.1	ILMN_3030340	002650435	I	1524	AGCATTCCTTTCGAACACCACGGCAAGTAGCTGCTCGTCTCCATCGGAAG	11	-	120826271-120826291:120826292-120826320	11qE2	Mus musculus casein kinase 1, delta (Csnk1d), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D930010H05Rik; 1200006A05Rik; AA409348	D930010H05Rik; 1200006A05Rik; AA409348
Mus musculus	RefSeq	ILMN_218794	ILMN_218794	CSNK1D	NM_027874.2	NM_027874.2		104318	76496488	NM_027874.2	Csnk1d	NP_082150.1	ILMN_2739965	002490040	S	1970	CTCCCTGATGATCCCACCGCAGCTACCAGTCTTCTACTTGGTTAAGACAG	11	-	120824784-120824833	11qE2	Mus musculus casein kinase 1, delta (Csnk1d), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D930010H05Rik; 1200006A05Rik; AA409348	D930010H05Rik; 1200006A05Rik; AA409348
Mus musculus	RefSeq	ILMN_218794	ILMN_218794	CSNK1D	NM_027874.2	NM_027874.2		104318	76496488	NM_027874.2	Csnk1d	NP_082150.1	ILMN_3103652	002710376	A	3434	GCCCGGCAAGTGTTCTTGTTGATACCTGTGGTTCTGGAGGGGTATGGGGT	11	-	120823320-120823369	11qE2	Mus musculus casein kinase 1, delta (Csnk1d), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D930010H05Rik; 1200006A05Rik; AA409348	D930010H05Rik; 1200006A05Rik; AA409348
Mus musculus	MEEBO	ILMN_195951	ILMN_195951	SCL0004052.1_76	scl0004052.1_76						scl0004052.1_76		ILMN_1218359	003870243	S	20	CCACCACCACCACCTATGTCCCCGGAGCTGCTACGAAAGCTCAGTCAGAC										
Mus musculus	RefSeq	ILMN_218610	ILMN_218610	CKMT2	NM_198415.1	NM_198415.1		76722	38259205	NM_198415.1	Ckmt2	NP_940807.1	ILMN_2817864	000430427	S	1124	AGAACCTGCGGCTCCAAAAGCGTGGCACAGGTGGTGTGGACACTGCTGCA	13	-	92330027-92330076	13qC3	Mus musculus creatine kinase, mitochondrial 2 (Ckmt2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways involving phosphocreatine, a phosphagen of creatine present in high concentration in striated muscle which is synthesized and broken down by creatine phosphokinase to buffer ATP concentration. It acts as an immediate energy reserve for muscle [goid 6603] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + creatine = ADP + phosphocreatine [goid 4111] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2300008A19Rik; ScCKmit	2300008A19Rik; ScCKmit
Mus musculus	RefSeq	ILMN_212616	ILMN_212616	CD177	NM_026862.3	NM_026862.3		68891	34328435	NM_026862.3	Cd177	NP_081138.2	ILMN_1225233	000670452	S	1873	GGTGTGTGCACCTGATGAGATTTGTCAAGAGACGCTGCTGCTCATAGACG	7	-	25531138-25531187	7qA3	Mus musculus CD177 antigen (Cd177), mRNA.				Pdp 3; 1190003K14Rik; Pdp3	Pdp 3; 1190003K14Rik; Pdp3
Mus musculus	RefSeq	ILMN_212616	ILMN_212616	CD177	NM_026862.3	NM_026862.3		68891	34328435	NM_026862.3	Cd177	NP_081138.2	ILMN_2789900	007000224	S	2405	CGGCTATCGGCCTGGATGTTAGGGCTATCGGCTCTTCTCAGCTCTTTGTA	7	-	25529261-25529310	7qA3	Mus musculus CD177 antigen (Cd177), mRNA.				Pdp 3; 1190003K14Rik; Pdp3	Pdp 3; 1190003K14Rik; Pdp3
Mus musculus	Riken	ILMN_202212	ILMN_202212	LIG3	ri|2410073M13|ZX00080B09|AK010719|1778					AK010719	Lig3		ILMN_1230337	002970129	S	1401	GCCAATACCTCGTTCCTGGCTGCTCTCAAGATTGGGGAGTCCTGCTACAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m) [goid 3910] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190811	ILMN_258078	DLX6AS	NR_002839.1	NR_002839.1		13397	84872134	NR_002839.1	Dlx6as		ILMN_1258058	003800128	S	964	AAGGGACAAGGTAGAGGGCACACAGACCTGGTGGGCTGGAGGGCGCAGTG	6	-	6814137-6814186	6qA1	Mus musculus distal-less homeobox 6, antisense (Dlx6as) on chromosome 6.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_221544	ILMN_221544	1110027O12RIK	scl50345.2.1_13	XM_354975.1			38081655	XM_354975.1	1110027O12Rik		ILMN_2737014	002750255	S	409	TCTGGGCTACGGGGAAAGTGGCCGGAAGATGAATTATGTCCCACTGACCA										
Mus musculus	MEEBO	ILMN_222520	ILMN_222520	OLFR905	scl37094.1.1_40	XM_146736.1			20884564	XM_146736.1	Olfr905		ILMN_2750834	004830427	S	380	TAACCCACTCTTGTATAATATTGTCATGTCTCCTAAACAATGTTTGATCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_196448	ILMN_196448	1700069L16RIK	XM_132345.2	XM_132345.2			38077668	XM_132345.2	1700069L16Rik		ILMN_1257910	000620709	S	440	AACACGGGAACTTGTCTGGAGAATACGAGGGGGCGAACCCTGAGCTGCTG										
Mus musculus	RefSeq	ILMN_197813	ILMN_325733	AI481877	XM_001476641.1	XM_001476641.1		100155	149252424	XM_001476641.1	AI481877	XP_001476691.1	ILMN_2529455	000360398	S	4506	CGACGTCTAATGTATGAGAAAGTCCCTGGAAGAGTGGATGGGCAAACCCG	4	-	59056754-59056803	4qB3	PREDICTED: Mus musculus expressed sequence AI481877 (AI481877), mRNA.					
Mus musculus	RefSeq	ILMN_196588	ILMN_196588	DEFCR-RS1	NM_007844.1	NM_007844.1			6681166	NM_007844.1	Defcr-rs1		ILMN_2524936	006250408	S	395	GTTGAGATGACCATTTGCTTTTGGTCCTCACGATCCCGTTGTGCTTAGCG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]			
Mus musculus	Riken	ILMN_203839	ILMN_203839	A330019P12RIK	ri|A330019P12|PX00130L17|AK039310|1044					AK039310	A330019P12Rik		ILMN_1243638	001230446	S	738	GCCCTAGAAAGAGGAATACTGGGAGGAGCAAGAGGGGTGGCTTAGACGCC										
Mus musculus	RefSeq	ILMN_198439	ILMN_239587	EG546913	XM_621729.4	XM_621729.4		546913	149255420	XM_621729.4	EG546913	XP_621729.4	ILMN_2531690	006280370	S	544	GGGACCAGTGTCCAGCTCCAGTCTCCTTACCAGTTTACTGTGCACACTGC	6	-	123588054-123588103	6qF2	PREDICTED: Mus musculus predicted gene, EG546913 (EG546913), mRNA.					
Mus musculus	RefSeq	ILMN_188577	ILMN_188577	TUBB4	NM_009451.3	NM_009451.3		22153	31981938	NM_009451.3	Tubb4	NP_033477.2	ILMN_1236175	002600176	S	2024	TCCTGACCCAGCACCTTCACTCTGGCTCCCGTAAGTCCCCGTATGTTCCT	17	-	57219643-57219692	17qD	Mus musculus tubulin, beta 4 (Tubb4), mRNA.	An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath [goid 33269] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Tubb; AI325297; M(beta)4	Tubb; AI325297; M(beta)4
Mus musculus	RefSeq	ILMN_218164	ILMN_310521	LOC100047815	XM_001478920.1	XM_001478920.1		100047815	149263126	XM_001478920.1	LOC100047815	XP_001478970.1	ILMN_1246266	001340553	S	596	CCTTCCCCAAGTCCAGCTCCCTCTCTAGTGGGTAATGAGCCCTTAATCGC					PREDICTED: Mus musculus similar to CD79A antigen (immunoglobulin-associated alpha) (LOC100047815), mRNA.					
Mus musculus	Riken	ILMN_203057	ILMN_203057	A930009K01RIK	ri|A930009K01|PX00065I02|AK044368|1435					AK044368	A930009K01Rik		ILMN_1235915	000010114	S	617	AACCCTTGAAGCTCGGGATCTTCTTCCAGGGGCGCGGGGCGTACGGAGAT										
Mus musculus	RefSeq	ILMN_254623	ILMN_254623	EG240327	NM_001033767.1	NM_001033767.1		240327	85702066	NM_001033767.1	EG240327	NP_001028939.1	ILMN_2904001	003400451	S	2430	GTGAGATGGGAGGCATAACGAGAAATATTTTGGGAGATCATGGGGCCAGG	18	+	60372974-60373023	18qD3	Mus musculus predicted gene, EG240327 (EG240327), mRNA.					
Mus musculus	Riken	ILMN_201981	ILMN_201981	1700015L13RIK	ri|1700015L13|ZX00037G21|AK006001|1620					AK006001	1700015L13Rik		ILMN_1243013	006660112	S	1374	AGGGCTCTGGGGGGCTGAGGCCAGGTTTCCACGTAAGCTGTGGTTAAATG										
Mus musculus	RefSeq	ILMN_220060	ILMN_220060	OLFR30	NM_146878.1	NM_146878.1		18329	22203796	NM_146878.1	Olfr30	NP_667089.1	ILMN_2717089	001580722	S	757	TATGGGCCCCTTGTCTACACCTACATGTTACCTGCTTCCTATCACTCGCC	11	-	58268643-58268692	11qB1.3	Mus musculus olfactory receptor 30 (Olfr30), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR281-1; MTPCR07	MOR281-1; MTPCR07
Mus musculus	RefSeq	ILMN_197802	ILMN_197802	LOC242459	XM_143768.3	XM_143768.3			38078320	XM_143768.3	LOC242459		ILMN_1254045	001570095	S	1344	GCAGCCATGGAGGTTATTGCCTGCGTCCCAGAATCAAGCAGTTGGGGTGC										
Mus musculus	RefSeq	ILMN_215977	ILMN_215977	MLYCD	NM_019966.2	NM_019966.2		56690	56797738	NM_019966.2	Mlycd	NP_064350.2	ILMN_1249691	000870373	S	1879	TGGGAGAGGACTAAGATCTGTACTGTGGCTAATACCGCAGCTTAAAGCTC	8	+	121934767-121934816	8qE1	Mus musculus malonyl-CoA decarboxylase (Mlycd), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of the reaction: malonyl-CoA = acetyl-CoA + CO2 [goid 50080] [evidence IEA]	AI324784; Mcd	AI324784; Mcd
Mus musculus	RefSeq	ILMN_223184	ILMN_223184	SOX3	NM_009237.1	NM_009237.1		20675	6678070	NM_009237.1	Sox3	NP_033263.1	ILMN_1245319	000730070	S	1075	TACCAGGGCGCCGGGACTGCGGTCAATGGAACGGTGCCGCTGACCCACAT	X	-	58145256-58145305	XqA6	Mus musculus SRY-box containing gene 3 (Sox3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a spermatid cell [goid 48515] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Sox-3	Sox-3
Mus musculus	RefSeq	ILMN_223184	ILMN_223184	SOX3	NM_009237.1	NM_009237.1		20675	6678070	NM_009237.1	Sox3	NP_033263.1	ILMN_2976077	004490739	S	704	GCCTGCAGTACAGCCCCATGATGCCACCCGGCGCCCAGAGCTACATGAAC	X	-	58145627-58145676	XqA6	Mus musculus SRY-box containing gene 3 (Sox3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a spermatid cell [goid 48515] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Sox-3	Sox-3
Mus musculus	RefSeq	ILMN_212396	ILMN_212396	RAI12	NM_018740.1	NM_018740.1		54351	9055319	NM_018740.1	Rai12	NP_061210.1	ILMN_1238130	004540594	S	80	TGTGTACAGAGACTCTGGAGCGGCCCCTCCGTGTAAGCCCCCTGAGAATA	11	-	69793883-69793932	11qB3	Mus musculus retinoic acid induced 12 (Rai12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_212396	ILMN_212396	RAI12	NM_018740.1	NM_018740.1		54351	9055319	NM_018740.1	Rai12	NP_061210.1	ILMN_1235982	005700215	S	1257	CGTGAGCCAAGGAGCAGCATCAAGCTAGGATGAGTGTGATGAGGGCATAG	11	-	69788517-69788566	11qB3	Mus musculus retinoic acid induced 12 (Rai12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_212396	ILMN_212396	RAI12	NM_018740.1	NM_018740.1		54351	9055319	NM_018740.1	Rai12	NP_061210.1	ILMN_2891573	005340546	S	1033	CTGAAAAACAGAAAGCTCTGCTGCATCCGGTACCCAGCCGGACCACTGGC	11	-	69788558-69788607	11qB3	Mus musculus retinoic acid induced 12 (Rai12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_212396	ILMN_212396	RAI12	NM_018740.1	NM_018740.1		54351	9055319	NM_018740.1	Rai12	NP_061210.1	ILMN_1214951	006130138	S	939	GTGGATCCCACTGCTCATTTGACCTTTAACCTTCACTTATCCAAGAAAGA	11	-	69788652-69788701	11qB3	Mus musculus retinoic acid induced 12 (Rai12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_222284	ILMN_222284	OLFR92	NM_146456.1	NM_146456.1		258448	33238933	NM_146456.1	Olfr92	NP_666667.1	ILMN_2747447	002710201	S	580	AGATCCAGATGGCTGTTGCTAGTATCTTCATTGTGGTTGTTCCTCTGAGC	17	-	37296547-37296596	17qB1	Mus musculus olfactory receptor 92 (Olfr92), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-29; bM573K1.4; MGC123503	MOR256-29; bM573K1.4; MGC123503
Mus musculus	RefSeq	ILMN_210172	ILMN_320347	LOC100044774	XR_030976.1	XR_030976.1		100044774	149266330	XR_030976.1	LOC100044774		ILMN_1230304	004260364	S	6041	GCATCCTGAGCAAACTTGATTGGAAAGCTGTTGAAGACATGGTGGCCAGC					PREDICTED: Mus musculus hypothetical protein LOC100044774 (LOC100044774), misc RNA.					
Mus musculus	RefSeq	ILMN_207462	ILMN_207462	PIRA6	NM_011093.1	NM_011093.1		18729	6755067	NM_011093.1	Pira6	NP_035223.1	ILMN_2587736	002370369	I	1773	CTACACTCTGGGAAATAAAGCTGATGACCCAAAGTTTTCTGTCAAGAGAA					Mus musculus paired-Ig-like receptor A6 (Pira6), transcript variant 2, mRNA.				Pira10; 12M1; p91B	Pira10; 12M1; p91B
Mus musculus	RefSeq	ILMN_196383	ILMN_228707	SETD6	NM_001035123.3	NM_001035123.3		66083	146198616	NM_001035123.3	Setd6	NP_001030295.1	ILMN_1223358	006840598	S	1365	GAGCTGGCGCGAACAACAAGCCTTACAGGTCCGCTATGGTCAGAAGATGA				8qD1	Mus musculus SET domain containing 6 (Setd6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			3110004G14Rik; C76402; 0610039J04Rik; AI413388	3110004G14Rik; C76402; 0610039J04Rik; AI413388
Mus musculus	RefSeq	ILMN_218833	ILMN_218833	PPIC	NM_008908.1	NM_008908.1		19038	6679440	NM_008908.1	Ppic	NP_032934.1	ILMN_2810882	004480333	S	1100	ACACGGTTCCTTGTGATCTCCATTTGGGTGACCCGAGGGTTTGTTTGAGG	18	-	53531846-53531895	18qD1	Mus musculus peptidylprolyl isomerase C (Ppic), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	CyP-20c	CyP-20c
Mus musculus	Riken	ILMN_205327	ILMN_205327	A230001M06RIK	ri|A230001M06|PX00126O06|AK038385|2756					AK038385	A230001M06Rik		ILMN_1231108	002260278	S	2519	CAAGAGGGCAAGGAATAAAGGACAAGGGCTTTTCTGAGCCCCAGTGACCC										
Mus musculus	MEEBO	ILMN_189849	ILMN_189849	C030044M21RIK	scl33057.1.1_314						C030044M21Rik		ILMN_2464933	000380400	S	3	GGGTGGAGGCCTGGGCAGGATCAACACAGAGACTGGAGGAATCAGAGACT										
Mus musculus	RefSeq	ILMN_221394	ILMN_221394	ERAL1	NM_022313.1	NM_022313.1		57837	11612490	NM_022313.1	Eral1	NP_071708.1	ILMN_2734969	002000468	S	1592	CTCAGTTCTCGGGGCGTTCCTCTGCCTAGGGTCTCAGTCAGTTGTATAGG	11	-	77887212-77887261	11qB5	Mus musculus Era (G-protein)-like 1 (E. coli) (Eral1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Era; 9130407C09Rik; MERA-W; MERA-S; 2610524P08Rik; AU019798	Era; 9130407C09Rik; MERA-W; MERA-S; 2610524P08Rik; AU019798
Mus musculus	RefSeq	ILMN_221394	ILMN_221394	ERAL1	NM_022313.1	NM_022313.1		57837	11612490	NM_022313.1	Eral1	NP_071708.1	ILMN_2777394	003830497	S	886	CTGGCCCTACTTCCAGGAGATCTTCATGTTATCAGCACTAAACAACAAGG	11	-	77888903-77888952	11qB5	Mus musculus Era (G-protein)-like 1 (E. coli) (Eral1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Era; 9130407C09Rik; MERA-W; MERA-S; 2610524P08Rik; AU019798	Era; 9130407C09Rik; MERA-W; MERA-S; 2610524P08Rik; AU019798
Mus musculus	RefSeq	ILMN_185578	ILMN_236931	MXD1	NM_010751.2	NM_010751.2		17119	142370244	NM_010751.2	Mxd1	NP_034881.1	ILMN_1224997	004150593	S	689	AAGCTCCAGGACGGGCACAAGGCGGGCCTCGGTCTATAGGAGAGTCCTCT	6	-	86600853-86600864:86600865-86600902	6qD1	Mus musculus MAX dimerization protein 1 (Mxd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW122478; Mad	AW122478; Mad
Mus musculus	RefSeq	ILMN_201158	ILMN_317912	LOC100041622	XM_001477924.1	XM_001477924.1		100041622	149260061	XM_001477924.1	LOC100041622	XP_001477974.1	ILMN_1229257	000540370	S	659	TGCAGGCCAATGCTCCCTCAGACGGAAGCCGCCAGCCTGCGTGTTCTGGA	9	+	70701013-70701062	9qD	PREDICTED: Mus musculus similar to RIKEN cDNA 1110014J01 gene (LOC100041622), mRNA.					
Mus musculus	RefSeq	ILMN_184304	ILMN_191394	ZCCHC6	NM_153538.2	NM_153538.2		214290	47059475	NM_153538.2	Zcchc6	NP_705766.2	ILMN_2417540	001470138	S	5354	GAGACAGCAGCCTCTTTGATCTTCAGAGGTTTGTAAAAGCTCTCCACCCT	13	-	59873341-59873390	13qB2	Mus musculus zinc finger, CCHC domain containing 6 (Zcchc6), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	6030448M23Rik; AA420405; MGC38585	6030448M23Rik; AA420405; MGC38585
Mus musculus	RefSeq	ILMN_191394	ILMN_191394	ZCCHC6	NM_153538.2	NM_153538.2		214290	47059475	NM_153538.2	Zcchc6	NP_705766.2	ILMN_1220072	004200630	S	5375	GGCAACCTTCTGGTCTGACTGGAGCCCTCTCTAAACTGTTAATGAACTTC	13	-	59873320-59873369	13qB2	Mus musculus zinc finger, CCHC domain containing 6 (Zcchc6), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	6030448M23Rik; AA420405; MGC38585	6030448M23Rik; AA420405; MGC38585
Mus musculus	RefSeq	ILMN_184444	ILMN_261106	CRK	NM_133656.3	NM_133656.3		12928	145301554	NM_133656.3	Crk	NP_598417.2	ILMN_1221405	007100592	S	775	TATGCCCAACCCAGCGTCAACACTCCGCTCCCTAACCTCCAGAATGGGCC				11qB5	Mus musculus v-crk sarcoma virus CT10 oncogene homolog (avian) (Crk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a phosphorylated amino acid residue within a protein [goid 45309] [evidence IDA]	Crk-II; Crk-III; Crko; Crkol; Crk-I; CrkIII; Crk3	Crk-II; Crk-III; Crko; Crkol; Crk-I; CrkIII; Crk3
Mus musculus	RefSeq	ILMN_198243	ILMN_322121	LOC240156	XR_033984.1	XR_033984.1		240156	149269412	XR_033984.1	LOC240156		ILMN_1244379	005570392	S	184	TGCAGCAGCTAAGGGCCATCCTCAATAAGTGGCTCAAAGTACCGCCAGCT				17qE1.3	PREDICTED: Mus musculus similar to ribosomal protein L7a (LOC240156), misc RNA.					
Mus musculus	RefSeq	ILMN_244518	ILMN_244518	PCDHAC1	NM_001003671.1	NM_001003671.1		353236	51092280	NM_001003671.1	Pcdhac1	NP_001003671.1	ILMN_2980110	002340437	S	2331	GGCTGCTGATCTGAGAAATCTGGCCCCTGGTGTAGGAATGAATTTGCCAG	18	+	37252120-37252169	18qB3	Mus musculus protocadherin alpha subfamily C, 1 (Pcdhac1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CNRc1	CNRc1
Mus musculus	MEEBO	ILMN_194508	ILMN_194508	OSP94	scl23243.20_160				40254360	NM_011020	Osp94		ILMN_2507059	000050072	S	8	TTTCCAAAGCAAAAAAGGTGCAATTTTAAAGAATACATAGCCAAAGCAAT										
Mus musculus	RefSeq	ILMN_210613	ILMN_210613	PIM2	NM_138606.2	NM_138606.2		18715	133908617	NM_138606.2	Pim2	NP_613072.1	ILMN_1222824	005570246	S	1788	CCAGAGACTAGGATGGGATGGATGGTTTTGGGGGGATGAGATGGAGGAAA	X	+	7460305-7460354	XqA1.1	Mus musculus proviral integration site 2 (Pim2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	Pim-2; DXCch3	Pim-2; DXCch3
Mus musculus	RefSeq	ILMN_222795	ILMN_315709	LOC100047808	XM_001478908.1	XM_001478908.1		100047808	149259329	XM_001478908.1	LOC100047808	XP_001478958.1	ILMN_2754940	002120382	S	646	AGTAGCACCTGCTGGAAGCTCTGACTGAAGGGTTCCGTGTGGAAAGCCTT					PREDICTED: Mus musculus hypothetical protein LOC100047808 (LOC100047808), mRNA.					
Mus musculus	RefSeq	ILMN_209289	ILMN_209154	MBTPS2	NM_172307.3	NM_172307.3		270669	149193328	NM_172307.3	Mbtps2	NP_758511.1	ILMN_2596955	004060280	S	743	CTGTTCACCACCCATTTGCAACTTATATCACCAGTCCAGCAGCTAAGGAT				XqF4	Mus musculus membrane-bound transcription factor peptidase, site 2 (Mbtps2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC25655; AI662535; 9630032G22Rik	MGC25655; AI662535; 9630032G22Rik
Mus musculus	RefSeq	ILMN_209154	ILMN_209154	MBTPS2	NM_172307.3	NM_172307.3		270669	149193328	NM_172307.3	Mbtps2	NP_758511.1	ILMN_2593049	006480403	S	2147	TTTGAAAGCAGGGCCTTACTTATGCTACTTAGGCTAAGCTTGCCTGTCCC				XqF4	Mus musculus membrane-bound transcription factor peptidase, site 2 (Mbtps2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC25655; AI662535; 9630032G22Rik	MGC25655; AI662535; 9630032G22Rik
Mus musculus	MEEBO	ILMN_214957	ILMN_214957	1110038D17RIK	scl0068778.1_112				51765707	XM_483920	1110038D17Rik		ILMN_2653900	005560102	S	3258	GGGAGATAGTGTGTCTATAAGAAAAAAGCCAGGGGGTACAGTGGGGGACA										
Mus musculus	RefSeq	ILMN_190025	ILMN_190025	TRPS1	NM_032000.1	NM_032000.1		83925	14030774	NM_032000.1	Trps1	NP_114389.1	ILMN_2466527	006940181	S	4121	CACGGACAAATATGACTTCACAACACATATCCAGAGGGGCCTGCATAGGA	15	-	50492262-50492311	15qC	Mus musculus trichorhinophalangeal syndrome I (human) (Trps1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IPI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	MGC107472; AI447310; D15Ertd586e; AI115454; MGC46754	MGC107472; AI447310; D15Ertd586e; AI115454; MGC46754
Mus musculus	RefSeq	ILMN_222805	ILMN_222805	SEH1L	NM_028112.2	NM_028112.2		72124	84875508	NM_028112.2	Seh1l	NP_082388.1	ILMN_1253876	001980689	S	1689	GAGCTGACTCTTAGATAAATATTCGGATGTTTTTAGTGCCTCTTGGGTAG	18	+	67952153-67952202	18qE1	Mus musculus SEH1-like (S. cerevisiae (Seh1l), transcript variant 2, mRNA.				Seh1; SEH1A; SEH1B; 2610007A16Rik; SEC13L; AW540070	Seh1; SEH1A; SEH1B; 2610007A16Rik; SEC13L; AW540070
Mus musculus	Riken	ILMN_204260	ILMN_204260	ZFP60	ri|B130009B07|PX00156N22|AK044869|2140					AK044869	Zfp60		ILMN_1221135	003830255	S	1726	TGTGGGAAACAAGGTGAGTGCTTAGGTAGATGGTGCTGGAGATGGAGCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213989	ILMN_213989	SLC25A15	NM_181325.2	NM_181325.2		18408	31342188	NM_181325.2	Slc25a15	NP_851842.1	ILMN_2643032	003290403	S	2696	GGCAGCGTGTCTCCTCAGTCTGGCTATTGTGATCTTTCCCATAGAAAGAG	8	-	23841736-23841785	8qA2	Mus musculus solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15 (Slc25a15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ornt1; D630044L02Rik	Ornt1; D630044L02Rik
Mus musculus	RefSeq	ILMN_210102	ILMN_210102	GAPVD1	NM_025709.2	NM_025709.2		66691	40254513	NM_025709.2	Gapvd1	NP_079985.2	ILMN_1240103	006220356	S	165	GGTAGTGAGCTGATACTGGAACATCCGAAACAGAAGTGAGACGTGGAGGC	2	-	34610538-34610587	2qB	Mus musculus GTPase activating protein and VPS9 domains 1 (Gapvd1), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the frequency, rate or extent of the directed movement of a protein into, out of, within or between cells [goid 51223] [evidence IMP]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a GTPase activating protein [goid 32794] [evidence IMP]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IMP]	4432404J10Rik; KIAA1521; RAP6; mKIAA1521; RME-6; Gapex-5; AW108497; 2010005B09Rik	4432404J10Rik; KIAA1521; RAP6; mKIAA1521; RME-6; Gapex-5; AW108497; 2010005B09Rik
Mus musculus	RefSeq	ILMN_210102	ILMN_210102	GAPVD1	NM_025709.2	NM_025709.2		66691	40254513	NM_025709.2	Gapvd1	NP_079985.2	ILMN_1238871	000460767	S	5739	CCGAGCCTCAGCTATCATCTGTCTCTGATGATGGTTCACATTGAATGCAC	2	-	34532664-34532713	2qB	Mus musculus GTPase activating protein and VPS9 domains 1 (Gapvd1), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the frequency, rate or extent of the directed movement of a protein into, out of, within or between cells [goid 51223] [evidence IMP]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a GTPase activating protein [goid 32794] [evidence IMP]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IMP]	4432404J10Rik; KIAA1521; RAP6; mKIAA1521; RME-6; Gapex-5; AW108497; 2010005B09Rik	4432404J10Rik; KIAA1521; RAP6; mKIAA1521; RME-6; Gapex-5; AW108497; 2010005B09Rik
Mus musculus	RefSeq	ILMN_210102	ILMN_210102	GAPVD1	NM_025709.2	NM_025709.2		66691	40254513	NM_025709.2	Gapvd1	NP_079985.2	ILMN_2880794	004220088	S	5730	GGCTCCTTACCGAGCCTCAGCTATCATCTGTCTCTGATGATGGTTCACAT	2	-	34532673-34532722	2qB	Mus musculus GTPase activating protein and VPS9 domains 1 (Gapvd1), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the frequency, rate or extent of the directed movement of a protein into, out of, within or between cells [goid 51223] [evidence IMP]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a GTPase activating protein [goid 32794] [evidence IMP]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IMP]	4432404J10Rik; KIAA1521; RAP6; mKIAA1521; RME-6; Gapex-5; AW108497; 2010005B09Rik	4432404J10Rik; KIAA1521; RAP6; mKIAA1521; RME-6; Gapex-5; AW108497; 2010005B09Rik
Mus musculus	Riken	ILMN_205569	ILMN_205569	E130114F22RIK	ri|E130114F22|PX00092G15|AK053612|3425					AK053612	E130114F22Rik		ILMN_1219248	004880564	S	3263	CTAGCACCTGTAGCAGATGGACCCAGGAAAGAAGCCTGAAAGACCTAACC										
Mus musculus	RefSeq	ILMN_216004	ILMN_216004	C1QL1	NM_011795.1	NM_011795.1		23829	6753221	NM_011795.1	C1ql1	NP_035925.1	ILMN_2864659	001090017	S	506	ACATTCCTGGCACCTACTTTTTCACCTACCACGTCCTCATGCGCGGCGGC	11	-	102807220-102807269	11qE1	Mus musculus complement component 1, q subcomponent-like 1 (C1ql1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CRF; gliacolin; C1qrf	CRF; gliacolin; C1qrf
Mus musculus	Riken	ILMN_203017	ILMN_203017	GUCY1A3	ri|6030404P15|PX00056E04|AK031305|3106					AK031305	Gucy1a3		ILMN_1233537	002490725	S	2518	CCACCCCTGCTGTTGGACATTGGTCTGTCTCAGTGTTTTGGAGGCTGTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP [goid 30828] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of nitric oxide produced as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction [goid 52565] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction [goid 60087] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA];  [goid 16849] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211348	ILMN_211348	ATXN3	NM_029705.2	NM_029705.2		110616	141802862	NM_029705.2	Atxn3	NP_083981.1	ILMN_1230667	004210364	S	94	GCAAGGAGAGTATTTTAGCCCTGTGGAGCTATCCTCAATTGCACACCAGC	12	-	103186555-103186604	12qE	Mus musculus ataxin 3 (Atxn3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Intranuclear foci at which aggregated proteins have been sequestered [goid 42405] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ATX3; 2210008M02Rik; AI647473; MJD1; ataxin-3; Mjd; Sca3	ATX3; 2210008M02Rik; AI647473; MJD1; ataxin-3; Mjd; Sca3
Mus musculus	RefSeq	ILMN_201208	ILMN_201208	LOC385038	XM_358009.1	XM_358009.1			38089829	XM_358009.1	LOC385038		ILMN_2541476	002070047	S	312	CCTGCCTCCAGGAACGGCCACAGTCAGCGTTAGAATCACGCATCTATATC										
Mus musculus	RefSeq	ILMN_221243	ILMN_221243	2410116G06RIK	NM_026630.1	NM_026630.1		68236	13386117	NM_026630.1	2410116G06Rik	NP_080906.1	ILMN_2980015	003060577	S	662	TGACGGCGCCAACTGTCACCCAATGTTCGTCCTTAAGAGTTTTGTTCCCC	2	-	162778640-162778689	2qH2	Mus musculus RIKEN cDNA 2410116G06 gene (2410116G06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_190938	ILMN_194060	TPR	NM_133780.2	NM_133780.2		108989	27477056	NM_133780.2	Tpr	NP_598541.2	ILMN_1228511	000060475	S	7451	GACAATCATTATATTAAAACAGATTCGTCAATCTTATTCACATGTGTCAC	1	+	152296981-152297030	1qG1	Mus musculus translocated promoter region (Tpr), mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C77892; 2610029M07Rik	C77892; 2610029M07Rik
Mus musculus	RefSeq	ILMN_194060	ILMN_194060	TPR	NM_133780.2	NM_133780.2		108989	27477056	NM_133780.2	Tpr	NP_598541.2	ILMN_2508433	003520189	S	7402	GTGACACATGTGAATAAGATTGACGAATCTGTTTTAATATAATGATTGTC	1	+	152296932-152296981	1qG1	Mus musculus translocated promoter region (Tpr), mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C77892; 2610029M07Rik	C77892; 2610029M07Rik
Mus musculus	RefSeq	ILMN_194060	ILMN_194060	TPR	NM_133780.2	NM_133780.2		108989	27477056	NM_133780.2	Tpr	NP_598541.2	ILMN_2502996	004040044	S	7214	CCCCCTTCGAGCTCCTCCGTAGATACCAGTAGTAGTCAACCGAAGCCTTT	1	+	152294739-152294760:152296273-152296300	1qG1	Mus musculus translocated promoter region (Tpr), mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C77892; 2610029M07Rik	C77892; 2610029M07Rik
Mus musculus	RefSeq	ILMN_253530	ILMN_253530	GIPC3	NM_148951.1	NM_148951.1		209047	22507362	NM_148951.1	Gipc3	NP_683753.1	ILMN_3001202	002340328	S	590	GTCCTGTGGAAGCTAAAGTGAGCAGCGGGAGGGAAACATTACGCCTGCGC	10	-	80803038-80803087	10qC1	Mus musculus GIPC PDZ domain containing family, member 3 (Gipc3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	Rgs19ip3	Rgs19ip3
Mus musculus	MEEBO	ILMN_186289	ILMN_186289	SAS	scl37402.3_73				13385481	NM_025982	Sas		ILMN_2757599	006520598	S	1302	TCCCAGCCCCACCTACAGTCTCATCAAAGCAGGACCAGTGAACTTAGAAA										
Mus musculus	RefSeq	ILMN_220711	ILMN_220711	PNLIPRP1	NM_018874.2	NM_018874.2		18946	141803252	NM_018874.2	Pnliprp1	NP_061362.1	ILMN_1225909	006270400	S	1544	CTCTCTTGCCTTGTAAAACCTCAGACACAATGTGACCTCTTGGTAACACC	19	+	58818584-58818618:58818619-58818633	19qD2	Mus musculus pancreatic lipase related protein 1 (Pnliprp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]	Plrp1	Plrp1
Mus musculus	RefSeq	ILMN_214577	ILMN_320971	2310061N02RIK	XM_001480614.1	XM_001480614.1		69661	149268036	XM_001480614.1	2310061N02Rik	XP_001480664.1	ILMN_2649464	005080224	S	614	CCTAGTGCTACTATCATAGGGTTTAAAGACAAGGTCCATCCAACTAAGAA				16qC3.3	PREDICTED: Mus musculus RIKEN cDNA 2310061N02 gene (2310061N02Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210809	ILMN_230638	LOC630253	XM_903376.2	XM_903376.2		630253	94393632	XM_903376.2	LOC630253	XP_908469.2	ILMN_1257271	006330193	S	214	GTTCGCCAGACTCCGGAAAAGAGGCTGGAGTGGGTCGCAACCATTAGTGA					PREDICTED: Mus musculus similar to Ig heavy chain V region 5-84 precursor (LOC630253), mRNA.					
Mus musculus	RefSeq	ILMN_237702	ILMN_237702	ASPHD2	NM_028386.1	NM_028386.1		72898	55926228	NM_028386.1	Asphd2	NP_082662.1	ILMN_3162247	005560670	S	1450	TGCTGGGACTTCTGGCCTACTAGTGTGTCCCTTTGGCTGTGACCAGAGGC	5	-	112814552-112814601	5qF	Mus musculus aspartate beta-hydroxylase domain containing 2 (Asphd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence IEA]	MGC54823; 2900006N09Rik; 9230106G13Rik	MGC54823; 2900006N09Rik; 9230106G13Rik
Mus musculus	RefSeq	ILMN_189152	ILMN_247830	LZTFL1	NM_033322.2	NM_033322.2		93730	31543134	NM_033322.2	Lztfl1	NP_201579.1	ILMN_1218871	002650192	S	3063	AAATAAAAACAACTAAAGAAGATGTGGCTTTGATTTAACTTTAAATTGAA	9	-	123607019-123607068	9qF4	Mus musculus leucine zipper transcription factor-like 1 (Lztfl1), mRNA.				6130400H19Rik; AI414725; 5530402H04Rik; MGC106871; AW048545	6130400H19Rik; AI414725; 5530402H04Rik; MGC106871; AW048545
Mus musculus	RefSeq	ILMN_214088	ILMN_214088	D630039A03RIK	NM_178727.2	NM_178727.2		242484	65301479	NM_178727.2	D630039A03Rik	NP_848842.1	ILMN_2644123	004670241	S	2677	TAACTTTAGGAAGTCACTTCTATTCCTTCGGTAAACAATAAATTCAATAC	4	-	57921425-57921474	4qB3	Mus musculus RIKEN cDNA D630039A03 gene (D630039A03Rik), mRNA.				RP23-334A5.4	RP23-334A5.4
Mus musculus	RefSeq	ILMN_209095	ILMN_209095	KCNU1	NM_008432.3	NM_008432.3		16532	120300927	NM_008432.3	Kcnu1	NP_032458.3	ILMN_2946288	005220747	S	3419	TTGTGCCAGTTGCTTAGTGGTCAGCGAGTTGGCAAGCCCACGGTGCTGTG	8	+	27048294-27048343	8qA2	Mus musculus potassium channel, subfamily U, member 1 (Kcnu1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	Slo3; Kcnma3; mSlo3	Slo3; Kcnma3; mSlo3
Mus musculus	Riken	ILMN_205916	ILMN_205916	SFXN5	ri|A830022I08|PX00154P07|AK043706|1083					AK043706	Sfxn5		ILMN_2576172	006270220	S	875	ATGGAAAAGCATGGCTCTGCCCTGGTGGAGGGACAGGGTAGCTGGCGGTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]		
Mus musculus	Riken	ILMN_203513	ILMN_203513	ADAM23	ri|9330142F22|PX00105F15|AK034022|3498					AK034022	Adam23		ILMN_1218345	006520671	S	2935	GGGTGATGCCTTTGTGAGAGGCTGTGTTTATCTTTCTGAGTGGAACTTAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223047	ILMN_223047	2610016C23RIK	NM_027930.1	NM_027930.1		71804	21313675	NM_027930.1	2610016C23Rik	NP_082206.1	ILMN_2758602	003190162	S	1643	ATTAAGTTAGTCATAGTTGTGAAAACACAGGAACACCTGAGAAACTGAAG	10	+	20050427-20050476	10qA3	Mus musculus RIKEN cDNA 2610016C23 gene (2610016C23Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Dufd1; 4933412C16Rik	Dufd1; 4933412C16Rik
Mus musculus	RefSeq	ILMN_216487	ILMN_216487	TES	NM_011570.3	NM_011570.3		21753	133778927	NM_011570.3	Tes	NP_035700.3	ILMN_1218592	005690593	S	2611	GACACAAAGGCTATTTTCTTTGCCTGTGCACTCCCATCCTTGGGTGTTTT	6	+	17055679-17055728	6qA2	Mus musculus testis derived transcript (Tes), transcript variant 1, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	testin2; D6Ertd352e; Tes1; Tes2; TESS	testin2; D6Ertd352e; Tes1; Tes2; TESS
Mus musculus	RefSeq	ILMN_216487	ILMN_216487	TES	NM_011570.3	NM_011570.3		21753	133778927	NM_011570.3	Tes	NP_035700.3	ILMN_1237948	004210138	S	114	GGACTGAGCCCCTCCGACGCCCAGTATGGACCTGGAAACCAAAATGAAGA	6	+	17015262-17015311	6qA2	Mus musculus testis derived transcript (Tes), transcript variant 1, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	testin2; D6Ertd352e; Tes1; Tes2; TESS	testin2; D6Ertd352e; Tes1; Tes2; TESS
Mus musculus	RefSeq	ILMN_204362	ILMN_240460	FKBP15	XM_485391.5	XM_485391.5		338355	149252549	XM_485391.5	Fkbp15	XP_485391.4	ILMN_1239625	003140703	S	2279	ACCTGCAGCTGAAAATGACGGCTCACCAGAAGAAGGAGACAGAATTGCAG	4	-	61975363-61975412	4qB3	PREDICTED: Mus musculus FK506 binding protein 15 (Fkbp15), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217109	ILMN_217109	HSDL2	NM_024255.2	NM_024255.2		72479	125656149	NM_024255.2	Hsdl2	NP_077217.2	ILMN_1219030	005220424	S	1768	TCTATAAGATTTGAAACTGTAACTAAAACAACTAACCAATCACATACAAG	4	+	59630746-59630795	4qB3	Mus musculus hydroxysteroid dehydrogenase like 2 (Hsdl2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA];  [goid 5498] [evidence IEA]	2610207I16Rik	2610207I16Rik
Mus musculus	RefSeq	ILMN_213675	ILMN_213675	LHX6	NM_008500.1	NM_008500.1		16874	6678691	NM_008500.1	Lhx6	NP_032526.1	ILMN_2774910	000540717	S	1276	AGATCCAGCATCCAGCTGTGGCCAGGGATCCACCACCTCTGTGTACACCC	2	-	35905981-35906030	2qB	Mus musculus LIM homeobox protein 6 (Lhx6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex [goid 21853] [evidence IMP]; The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain [goid 21799] [evidence IMP]; The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration [goid 21800] [evidence IMP]; The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell [goid 21884] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_190969	ILMN_190969	TXNDC3	NM_181591.2	NM_181591.2		73412	31795582	NM_181591.2	Txndc3	NP_853622.1	ILMN_2474917	000520017	S	1556	GAGGTAATGAAGAAGTTTTCATCAACGTAAAACCACGAGACACAACTTTC	13	-	19737045-19737088:19737089-19737094	13qA2	Mus musculus thioredoxin domain containing 3 (spermatozoa) (Txndc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Sptrx-2; 1700056P15Rik	Sptrx-2; 1700056P15Rik
Mus musculus	RefSeq	ILMN_219601	ILMN_219601	GALNT13	NM_173030.2	NM_173030.2		271786	76677927	NM_173030.2	Galnt13	NP_766618.2	ILMN_2711034	004150577	S	1966	CCAGACTCAGTGGCCCTGTAATCATGCTAAAATGCCACCACATGAGAGGA	2	+	54951032-54951081	2qC1.1	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (Galnt13), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IDA]	A230002A12; BB182356; A230020F20	A230002A12; BB182356; A230020F20
Mus musculus	RefSeq	ILMN_220887	ILMN_220887	TMEM67	NM_177861.3	NM_177861.3		329795	142364059	NM_177861.3	Tmem67	NP_808529.1	ILMN_2728173	006560112	S	3074	AATACATATTATTCTCCCATTTTTTATCTACAGAAAGATTTATTTTTATA	4	-	11966834-11966883	4qA1	Mus musculus transmembrane protein 67 (Tmem67), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			5330408M12Rik; B230117O07	5330408M12Rik; B230117O07
Mus musculus	RefSeq	ILMN_217797	ILMN_217797	C1RL	NM_181344.4	NM_181344.4		232371	83649724	NM_181344.4	C1rl	NP_851989.2	ILMN_1255190	005490133	S	1278	ATGCAGGTGAACAGTGTCTGCCAGGGAGACAGCGGCAGCGTCTATGTGGT	6	+	124458950-124458999	6qF2	Mus musculus complement component 1, r subcomponent-like (C1rl), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	C1rlp; C1r-LP; C1rl1	C1rlp; C1r-LP; C1rl1
Mus musculus	RefSeq	ILMN_217797	ILMN_217797	C1RL	NM_181344.4	NM_181344.4		232371	83649724	NM_181344.4	C1rl	NP_851989.2	ILMN_2728796	006040746	S	642	TGGAAGTGGAAGGACAGACAGGATGGAGGAGAGGTTCCTGAATGCGTGCC	6	+	124457131-124457180	6qF2	Mus musculus complement component 1, r subcomponent-like (C1rl), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	C1rlp; C1r-LP; C1rl1	C1rlp; C1r-LP; C1rl1
Mus musculus	RefSeq	ILMN_223737	ILMN_223737	NTF5	NM_198190.1	NM_198190.1		78405	38016141	NM_198190.1	Ntf5	NP_937833.1	ILMN_2768390	000070369	S	1712	ACCACCCAGGGAGTGCAAGCAAGCATGGATACCTCCCATCCAACATGACC	7	+	52672298-52672347	7qB4	Mus musculus neurotrophin 5 (Ntf5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IMP]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into a ganglion mother cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 7402] [evidence IMP]; The process by which boundaries between a sensory organ and the surrounding tissue are established and maintained [goid 8052] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with the neurotrophin p75 receptor [goid 5166] [evidence TAS]	Ntf4; NT-4; AI462899; NT4/5; Ntf-5; 2900040K06Rik; NT4	Ntf4; NT-4; AI462899; NT4/5; Ntf-5; 2900040K06Rik; NT4
Mus musculus	MEEBO	ILMN_184298	ILMN_184298	TMPRSS4	scl35930.13.1_56	NM_145403.1			21703805	NM_145403.1	Tmprss4		ILMN_2428060	005960296	S	15	ATGCTACTGCAGGCATCAGTCCAGGTCATTGACAGCACACGGTGCAATGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187632	ILMN_187632	B230112I24RIK	scl1719.1.1_265						B230112I24Rik		ILMN_1212775	007320563	S	20	GTACTACTGCCCCATGAAGATGCTCATGACTTCTACAAAGGGTTTAGGGG										
Mus musculus	Riken	ILMN_203576	ILMN_203576	GABRQ	ri|A230069E17|PX00129I04|AK038859|2481					AK038859	Gabrq		ILMN_2558360	007650398	S	2031	AGCAGGGCTCCTGATAAGAGTGGGATGAGCCTGTACACCAACTTTCCAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence ISS]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence ISS]		
Mus musculus	RefSeq	ILMN_199540	ILMN_199540	LOC382713	XM_356637.1	XM_356637.1			38074078	XM_356637.1	LOC382713		ILMN_1226707	000650343	S	118	ATCGATGAGGTGAGCGGTAGCATAGCCCGCGCCCTGAGGGAGGCTAGGGT										
Mus musculus	Riken	ILMN_206798	ILMN_206798	MTAP2	ri|A330078K03|PX00133N11|AK079618|3541					AK079618	Mtap2		ILMN_1226082	003180593	S	3340	AGATCTGCTGGGTGAGGGAACAGGTGGACTTCACTGCTTTGTCTACAAGA						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_218317	ILMN_218317	TCTE2	scl021646.1_107	NM_022311.1			33468932	NM_022311.1	Tcte2		ILMN_1254346	000540278	S	933	GCCCCTCCTTTCTCTTCCAGTATGTATTCACATGACACAAGCAGATGCAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_204883	ILMN_204883	A530006F08RIK	ri|A530006F08|PX00140E21|AK040649|2961					AK040649	A530006F08Rik		ILMN_1232858	001300180	S	2893	GCCTTGGGAGAAGGGTATAGCTGACCCTACCTTGTGATCTCAGAGGGCTG										
Mus musculus	RefSeq	ILMN_211590	ILMN_211590	GFRA3	NM_010280.2	NM_010280.2		14587	31981761	NM_010280.2	Gfra3	NP_034410.2	ILMN_3029078	001500228	I	223	GGCCAGAAAGAAATGCGAGGCTAATCCCGCTTGCAAGGCTGCCTACCAGC	18	-	34870961-34871010	18qB1	Mus musculus glial cell line derived neurotrophic factor family receptor alpha 3 (Gfra3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [goid 48485] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [evidence TAS];  [goid 8046] [evidence IMP]	Y15110	Y15110
Mus musculus	RefSeq	ILMN_211590	ILMN_211590	GFRA3	NM_010280.2	NM_010280.2		14587	31981761	NM_010280.2	Gfra3	NP_034410.2	ILMN_3102260	002450202	A	1524	CTTCTGGCTCAGGCTGCTCCTCCTTAGGACTTTGTGGGTCCAGTTTTGCC	18	-	34849902-34849951	18qB1	Mus musculus glial cell line derived neurotrophic factor family receptor alpha 3 (Gfra3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [goid 48485] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [evidence TAS];  [goid 8046] [evidence IMP]	Y15110	Y15110
Mus musculus	RefSeq	ILMN_216449	ILMN_216449	DMP1	NM_016779.2	NM_016779.2		13406	88900498	NM_016779.2	Dmp1	NP_058059.2	ILMN_2671225	002650189	S	2059	AAGTAACACATTAAAGGATACAAAGAAGGAGCCCCTGGAGCTGGGCTACA	5	+	104642420-104642469	5qE5	Mus musculus dentin matrix protein 1 (Dmp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]		AV020965; Dmp; PP; MGC130441	AV020965; Dmp; PP; MGC130441
Mus musculus	RefSeq	ILMN_200223	ILMN_200223	LOC385985	XM_359025.1	XM_359025.1			38080995	XM_359025.1	LOC385985		ILMN_1249795	006290164	S	869	CACCGGAGACTATGAAAGCCAGAAGAGCCTGGACAGATGTTATACGGACA										
Mus musculus	RefSeq	ILMN_229796	ILMN_229796	MAGI1	NM_001029850.2	NM_001029850.2		14924	118131186	NM_001029850.2	Magi1	NP_001025021.1	ILMN_3056789	004760523	I	3056	GTCGGATTATTGAGGGGAGCCCTGCTGACCGCTGTGGCAAGCTGAAAGTA				6qD1	Mus musculus membrane associated guanylate kinase, WW and PDZ domain containing 1 (Magi1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MAGI1c; TNRC19; KIAA4129; BAP1; Magi-1; WWP3; Gukmi1; Baiap1; mKIAA4129; AIP3	MAGI1c; TNRC19; KIAA4129; BAP1; Magi-1; WWP3; Gukmi1; Baiap1; mKIAA4129; AIP3
Mus musculus	RefSeq	ILMN_229796	ILMN_229796	MAGI1	NM_001029850.2	NM_001029850.2		14924	118131186	NM_001029850.2	Magi1	NP_001025021.1	ILMN_3133835	002760328	A	4140	GAGGTCCCTCGAAAGACTCCTGGATCAAAGACGGTCCCCAGAGCGCAGAA				6qD1	Mus musculus membrane associated guanylate kinase, WW and PDZ domain containing 1 (Magi1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MAGI1c; TNRC19; KIAA4129; BAP1; Magi-1; WWP3; Gukmi1; Baiap1; mKIAA4129; AIP3	MAGI1c; TNRC19; KIAA4129; BAP1; Magi-1; WWP3; Gukmi1; Baiap1; mKIAA4129; AIP3
Mus musculus	Riken	ILMN_205443	ILMN_205443	E330027P06RIK	ri|E330027P06|PX00212O11|AK054460|3894					AK054460	E330027P06Rik		ILMN_1224306	006510100	S	3843	CATGGAACAGTCTTGGTCTGTGTTCTCATAGCCCGGTTCCCTCCACCATC										
Mus musculus	MEEBO	ILMN_188776	ILMN_188776	9430031J16RIK	scl17749.10.1_11				54020734	NM_172849	9430031J16Rik		ILMN_1259094	000770670	S	3260	GGCCATAGAGACAAATTAGCCAACCAGATAATTTAGATATTTACGAACAG										
Mus musculus	MEEBO	ILMN_188776	ILMN_188776	9430031J16RIK	scl17749.10.1_11				54020734	NM_172849	9430031J16Rik		ILMN_2455613	007320022	S	14	GGAGACCATACAATGCTTGAGATGATTGAGAAAAAGCGTTGCTTGTGCAA										
Mus musculus	MEEBO	ILMN_215600	ILMN_215600	D930038M13RIK	scl0224226.1_58	XM_359276.1			38080107	XM_359276.1	D930038M13Rik		ILMN_2661449	005260273	S	2688	CTGAGTGTGATGTCAGCATGAAAAGATAATGCATGGTGAGAAGCTATTGT										
Mus musculus	MEEBO	ILMN_188757	ILMN_188757	A930026I22RIK	scl53055.1.1_122						A930026I22Rik		ILMN_2455447	006130196	S	2	CCAAACGTAAGCCCTGCTTTGTCTGATTTCCACCCTCCTCAGTCGTACCC										
Mus musculus	Riken	ILMN_202043	ILMN_202043	3010002L02RIK	ri|3010002L02|ZX00055G19|AK013891|1954					AK013891	3010002L02Rik		ILMN_1258366	000520059	S	1741	GCACTTGTGCCATGCCTTCACCCTTCCTCACATTCAGCAGACTGAGCCCC										
Mus musculus	Riken	ILMN_202768	ILMN_202768	4930435F02RIK	ri|4930435F02|PX00031G17|AK019597|2880					AK019597	4930435F02Rik		ILMN_1221727	006380446	S	2516	AGAAGCGGTGGAAGTTCGTGTCTGGTCAGGGATAGTGGCACAGTGGTCCG										
Mus musculus	Riken	ILMN_203901	ILMN_203901	H2-T18	ri|9430039F19|PX00108P20|AK034791|2058					AK034791	H2-T18		ILMN_1225559	002000528	S	1882	GCACACGTTGGATGACTGATGCTCAAGAAGGTCAGAAGAGGGCACTGGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200113	ILMN_200113	LOC384215	XM_357494.1	XM_357494.1			38080445	XM_357494.1	LOC384215		ILMN_2537640	004730162	S	1027	ACAGGGGAGTCCACAGTGCTGCCTGTTCCCAGAACGTGGGCATCAATTCT										
Mus musculus	Riken	ILMN_203728	ILMN_203728	DRCTNNB1A-PENDING	ri|9830160P12|PX00118B10|AK036680|3127					AK036680	Drctnnb1a-pending		ILMN_2559524	006420246	S	2502	TGGTACAGTAGAACTGGCCCTGGAGGTGGGAGGGGGGCATGGGTGAGCTA										
Mus musculus	RefSeq	ILMN_184614	ILMN_184614	YAF2	NM_024189.5	NM_024189.5		67057	142379604	NM_024189.5	Yaf2	NP_077151.3	ILMN_2420095	003170370	S	2091	GCAGTTCGTTTCATTGGCACAGTGGTACTCTTGTAACGTGCTAGTTGTGA	15	-	93114343-93114392	15qE3	Mus musculus YY1 associated factor 2 (Yaf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810021M11Rik	2810021M11Rik
Mus musculus	Riken	ILMN_207262	ILMN_207262	G630007B09RIK	ri|G630007B09|PL00012N14|AK090152|2416					AK090152	G630007B09Rik		ILMN_1247917	006400400	S	2236	ATGAGCTATACCCCTAGCGTTTCATGTCGTCTTTGGGGGGCGGGGGAGTG										
Mus musculus	RefSeq	ILMN_231163	ILMN_231163	JARID1B	NM_152895.1	NM_152895.1		75605	23097247	NM_152895.1	Jarid1b	NP_690855.1	ILMN_2946020	005870300	S	5988	TGTTGTATCAGTTGAGGGGGACCTTGGGCCTGCCTGGGACTTCTCTGCCA	1	+	136529160-136529209	1qE4	Mus musculus jumonji, AT rich interactive domain 1B (Rbp2 like) (Jarid1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2210016I17Rik; Plu1; RBBP2H1A; Rb-Bp2; D1Ertd202e; 2010009J12Rik; mKIAA4034; PLU-1; KIAA4034; AW556288; PUT1	2210016I17Rik; Plu1; RBBP2H1A; Rb-Bp2; D1Ertd202e; 2010009J12Rik; mKIAA4034; PLU-1; KIAA4034; AW556288; PUT1
Mus musculus	RefSeq	ILMN_200208	ILMN_200208	LOC385657	XM_358857.1	XM_358857.1			38080923	XM_358857.1	LOC385657		ILMN_1216303	001990201	S	3	CTGATGGCAGCTTAGAGTCCTTGTCAGAAGTGTAAATCATCCACAAGAGG										
Mus musculus	RefSeq	ILMN_194979	ILMN_241584	A430033K04RIK	NM_183025.1	NM_183025.1		243308	33942099	NM_183025.1	A430033K04Rik	NP_898846.1	ILMN_2754561	004670274	S	2539	CGCCTGGCAAGTAAGGACTCCCATGAGTGTAAATGATGCTGAGATGTTTC	5	+	139089486-139089535	5qG2	Mus musculus RIKEN cDNA A430033K04 gene (A430033K04Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214800	ILMN_214800	FRG1	NM_013522.1	NM_013522.1		14300	7305068	NM_013522.1	Frg1	NP_038550.1	ILMN_2896797	006940348	S	679	CCAAGAAAAAGGATGACATCCCAGAAGAAGACAAGGGAAGTGTGAAGCAG	8	-	42495733-42495782	8qA4	Mus musculus FSHD region gene 1 (Frg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]			
Mus musculus	RefSeq	ILMN_214800	ILMN_214800	FRG1	NM_013522.1	NM_013522.1		14300	7305068	NM_013522.1	Frg1	NP_038550.1	ILMN_1240867	003370154	S	276	GGGGAGATTTCAGGAACTATTGCCATTGAAATGGATAAAGGAGCCTATAT	8	-	42501445-42501476:42501477-42501494	8qA4	Mus musculus FSHD region gene 1 (Frg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]			
Mus musculus	RefSeq	ILMN_213764	ILMN_244772	COLEC11	NM_027866.1	NM_027866.1		71693	103472133	NM_027866.1	Colec11	NP_082142.1	ILMN_2640542	005550291	S	1107	CTTTGTCAGACGTTCATTATGGCTAACCACTCGGAAGGATGCTGTGAAGC	12	-	29279264-29279313	12qA2	Mus musculus collectin sub-family member 11 (Colec11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC129470; MGC129471; 1010001H16Rik	MGC129470; MGC129471; 1010001H16Rik
Mus musculus	Riken	ILMN_206233	ILMN_206233	SLC20A1	ri|D230004H07|PX00187J04|AK084159|1630					AK084159	Slc20a1		ILMN_1247410	001340240	S	1458	CTCCACTTTCTCAGTAAGAAGAGTAGGGATGAGTTGTTGGGGGGGGGGTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 5315] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218524	ILMN_218524	TAZ	NM_181516.2	NM_181516.2		66826	31559789	NM_181516.2	Taz	NP_852657.1	ILMN_2978525	007200014	S	1453	GGTCCCTTGGATGGGCTACTACTTGCCCACTGCTCACAAACCTCATCAGG	X	+	70542538-70542587	XqA7.3	Mus musculus tafazzin (Taz), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The chemical reactions and pathways involving phosphatidylglycerols, any of a class of phospholipids in which the phosphatidyl group is esterified to the hydroxyl group of glycerol. They are important constituents of cell membranes [goid 46471] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	G4.5; XAP-2; AW552613; 9130012G04Rik; AW107266; 5031411C02Rik	G4.5; XAP-2; AW552613; 9130012G04Rik; AW107266; 5031411C02Rik
Mus musculus	Riken	ILMN_203811	ILMN_203811	A330067K20RIK	ri|A330067K20|PX00132K13|AK039587|2236					AK039587	A330067K20Rik		ILMN_1239029	007610446	S	1613	GGCCTTTGGTGATCCAGATTAGAGCAGAATTGGCTTCCTGCCCCACTGAC										
Mus musculus	MEEBO	ILMN_193650	ILMN_193650	4930438D12RIK	scl47170.8_74				31340622	NM_175212	4930438D12Rik		ILMN_2709399	006420678	S	3134	TCTAATGACATATTGTCCCTGGGCAAGGGCTGGTTCTTACTATAGGAAGC										
Mus musculus	RefSeq	ILMN_217252	ILMN_217252	TCTE1	NM_013688.2	NM_013688.2		21645	124430563	NM_013688.2	Tcte1	NP_038716.2	ILMN_2680947	006510450	S	2722	CTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAGAGCACCAG	17	+	45679276-45679325	17qB3	Mus musculus t-complex-associated testis expressed 1 (Tcte1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tcte-1; D17Sil1	Tcte-1; D17Sil1
Mus musculus	RefSeq	ILMN_215751	ILMN_215751	RIN2	NM_028724.3	NM_028724.3		74030	141802329	NM_028724.3	Rin2	NP_083000.4	ILMN_2663196	002120544	S	4059	GCCGACACTAAGGACATCCATTTATTTGGAGGCAGAAACCAAGTCATGTA	2	+	145712785-145712834	2qG1	Mus musculus Ras and Rab interactor 2 (Rin2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW821980; RASSF4; 2010003K16Rik; 4632403N06Rik	AW821980; RASSF4; 2010003K16Rik; 4632403N06Rik
Mus musculus	RefSeq	ILMN_209063	ILMN_239534	CEP63	NM_001081122.1	NM_001081122.1		28135	124487470	NM_001081122.1	Cep63	NP_001074591.1	ILMN_1220309	007100521	S	2500	GCAGACTGGGCACTTGGGTATTTTCACTGCGTTGTGTGGAGGACTGCTTC	9	-	102489054-102489103	9qF1	Mus musculus centrosomal protein 63 (Cep63), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D9Mgc48e; AL450317.13gm1; D9Mgc41; ET2; CD20R; 4921501M07	D9Mgc48e; AL450317.13gm1; D9Mgc41; ET2; CD20R; 4921501M07
Mus musculus	RefSeq	ILMN_189282	ILMN_239534	CEP63	NM_001081122.1	NM_001081122.1		28135	124487470	NM_001081122.1	Cep63	NP_001074591.1	ILMN_2473775	003610070	S	1794	GCAGACCTTCAGGAGAATTATATTGAGGCCTTAAATAAATTAGTGTCTGA	9	-	102492795-102492844	9qF1	Mus musculus centrosomal protein 63 (Cep63), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D9Mgc48e; AL450317.13gm1; D9Mgc41; ET2; CD20R; 4921501M07	D9Mgc48e; AL450317.13gm1; D9Mgc41; ET2; CD20R; 4921501M07
Mus musculus	RefSeq	ILMN_189282	ILMN_239534	CEP63	NM_001081122.1	NM_001081122.1		28135	124487470	NM_001081122.1	Cep63	NP_001074591.1	ILMN_1217640	002140161	S	2006	TGACGGAATAAAGACCGAGCAGTACAAAACAGGTCACCACTCGCCTCGAG	9	-	102491243-102491292	9qF1	Mus musculus centrosomal protein 63 (Cep63), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D9Mgc48e; AL450317.13gm1; D9Mgc41; ET2; CD20R; 4921501M07	D9Mgc48e; AL450317.13gm1; D9Mgc41; ET2; CD20R; 4921501M07
Mus musculus	RefSeq	ILMN_239534	ILMN_239534	CEP63	NM_001081122.1	NM_001081122.1		28135	124487470	NM_001081122.1	Cep63	NP_001074591.1	ILMN_2935979	000840086	S	487	GTGATCGGGAGCTGAAGGCTCTGAGGAGTCAGCTGGACATGAAGCACAAA	9	-	102521143-102521192	9qF1	Mus musculus centrosomal protein 63 (Cep63), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D9Mgc48e; AL450317.13gm1; D9Mgc41; ET2; CD20R; 4921501M07	D9Mgc48e; AL450317.13gm1; D9Mgc41; ET2; CD20R; 4921501M07
Mus musculus	RefSeq	ILMN_185107	ILMN_233873	GINS2	NM_178856.1	NM_178856.1		272551	124249059	NM_178856.1	Gins2	NP_849187.1	ILMN_1246270	000510402	S	200	GGCTGGCCATTAACCTGAAACAGAGACAGAAGTGCCGCCTGTTACCTCCG	8	-	123112640-123112689	8qE1	Mus musculus GINS complex subunit 2 (Psf2 homolog) (Gins2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]		Pfs2; AI323585; 2210013I18Rik; 4833427B12Rik	Pfs2; AI323585; 2210013I18Rik; 4833427B12Rik
Mus musculus	RefSeq	ILMN_202224	ILMN_233873	GINS2	NM_178856.1	NM_178856.1		272551	124249059	NM_178856.1	Gins2	NP_849187.1	ILMN_2547942	001780338	S	850	CGTGGAAAGCTGTATGTAGTTGAGGCTGAGCGTGAGGGTGGGGGTGGTGA	8	-	123105304-123105353	8qE1	Mus musculus GINS complex subunit 2 (Psf2 homolog) (Gins2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]		Pfs2; AI323585; 2210013I18Rik; 4833427B12Rik	Pfs2; AI323585; 2210013I18Rik; 4833427B12Rik
Mus musculus	Riken	ILMN_203882	ILMN_203882	A630055I06RIK	ri|A630055I06|PX00146L15|AK042066|908					AK042066	A630055I06Rik		ILMN_1228411	005890646	S	212	TGCCGCAGCGGGGATCTGGATCTGGAAGACTACTCTCCTGCAGCTGAAAC										
Mus musculus	RefSeq	ILMN_214257	ILMN_313211	LOC100041463	XM_001476700.1	XM_001476700.1		100041463	149261909	XM_001476700.1	LOC100041463	XP_001476750.1	ILMN_1233917	007560121	S	196	CACTCAGAACCTGAGCTGCTGCAATGTCACAAAGGCGAGGTGCTGCGCCT	11	-	54640435-54640484	11qB1.3	PREDICTED: Mus musculus hypothetical protein LOC100041463 (LOC100041463), mRNA.					
Mus musculus	RefSeq	ILMN_219444	ILMN_219444	NEUROD6	NM_009717.1	NM_009717.1		11922	6753129	NM_009717.1	Neurod6	NP_033847.1	ILMN_2708982	003990561	S	1865	TGTTCAGGATTTTTCTGTACAGGTTTGTTACAGTGTATAATTGTGTTTTC	6	-	55627857-55627906	6qB3	Mus musculus neurogenic differentiation 6 (Neurod6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Nex; MGC90713; Math-2; Nex1m; Math2; Atoh2	Nex; MGC90713; Math-2; Nex1m; Math2; Atoh2
Mus musculus	Riken	ILMN_202955	ILMN_202955	A930026H04RIK	ri|A930026H04|PX00066J19|AK044604|1713					AK044604	A930026H04Rik		ILMN_1214771	005860270	S	1589	CTCAGGAGCCTGGCATGATGGGACAGACCTTTACTCCCTGCACTTGAGGC										
Mus musculus	Riken	ILMN_205930	ILMN_205930	FLT3	ri|B230315G04|PX00159G10|AK045865|3761					AK045865	Flt3		ILMN_2576268	004070440	S	3513	GGGGCTTGAGGGTAGGAGAGCTGTGAGCCTGAGTATATACAAAAAGGAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby a relatively unspecialized precursor cell acquires specialized features of B cells, T cells, or natural killer cells [goid 30098] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	Riken	ILMN_206760	ILMN_206760	D930016B10RIK	ri|D930016B10|PX00201A12|AK086243|750					AK086243	D930016B10Rik		ILMN_2582503	002260367	S	553	GGGGAGAAAAGACCTAAGCTCCTCCCCTCACTGTACTCTGCTGGAGCTGG										
Mus musculus	RefSeq	ILMN_193757	ILMN_226482	RFX5	NM_017395.2	NM_017395.2		53970	71037396	NM_017395.2	Rfx5	NP_059091.2	ILMN_2618625	006180184	S	1946	CAAAGTTCCCTAACCCCTGAGCATAAAGACCCCAAAGCAACACCCCCATG	3	+	94763240-94763289	3qF2.1	Mus musculus regulatory factor X, 5 (influences HLA class II expression) (Rfx5), mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]			
Mus musculus	RefSeq	ILMN_190037	ILMN_233529	ULK3	XM_620754.3	XM_620754.3		71742	94386134	XM_620754.3	Ulk3	XP_620754.3	ILMN_2466637	002650431	S	2720	CCGCCTCCTTAGGGCAAAATGGAACACCCTCCTTGCTAGAGGCTGGATGT	9	+	57443940-57443989	9qB	PREDICTED: Mus musculus unc-51-like kinase 3 (C. elegans), transcript variant 1 (Ulk3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	Riken	ILMN_206863	ILMN_206863	D930026K06RIK	ri|D930026K06|PX00202B08|AK086413|3512					AK086413	D930026K06Rik		ILMN_1260159	005270730	S	3135	TCCCAGGAAACCCACAGTTTCCAGAAGGGAAGGGGGCGGACCACATTGGT										
Mus musculus	MEEBO	ILMN_223857	ILMN_223857	OLFR855	scl37253.1.1_129				33239269	NM_146524	Olfr855		ILMN_2770509	007160722	S	688	TCATTGGAGGGAAAGTATAAAGCCTTCTCTACTTGCGGGACTCACTTGTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_209255	ILMN_209255	DSCAM	NM_031174.3	NM_031174.3		13508	118130729	NM_031174.3	Dscam	NP_112451.1	ILMN_2758147	006180056	S	6059	GGATCTGCAGATTCACTGCATCTCCCCCCAAACCTCAGGATGGAGGACGA	16	-	96829679-96829728	16qC4	Mus musculus Down syndrome cell adhesion molecule (Dscam), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized in a camera-type eye during the post-embryonic life stage . Morphogenesis pertains to the creation of form [goid 60060] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4932410A21Rik	4932410A21Rik
Mus musculus	RefSeq	ILMN_209255	ILMN_209255	DSCAM	NM_031174.3	NM_031174.3		13508	118130729	NM_031174.3	Dscam	NP_112451.1	ILMN_1252446	006760554	S	5199	TGTCCAAAGCGAAGAAGGGCTGACAACCAACGAAGGGCTCAAGATCCTCG	16	-	96862443-96862492	16qC4	Mus musculus Down syndrome cell adhesion molecule (Dscam), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized in a camera-type eye during the post-embryonic life stage . Morphogenesis pertains to the creation of form [goid 60060] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4932410A21Rik	4932410A21Rik
Mus musculus	RefSeq	ILMN_205394	ILMN_230854	ZFP644	NM_026856.2	NM_026856.2		52397	51988895	NM_026856.2	Zfp644	NP_081132.2	ILMN_1257573	005570369	S	1216	GATCACTCGCTACACAGAGGACTGCTACAGTGACTCAGGCCGTGCACCTG	5	-	107066749-107066798	5qE5	Mus musculus zinc finger protein 644 (Zfp644), mRNA.				BM-005; AA408882; D5Ertd689e; Zep-2; 1110068L01Rik	BM-005; AA408882; D5Ertd689e; Zep-2; 1110068L01Rik
Mus musculus	RefSeq	ILMN_215940	ILMN_230854	ZFP644	NM_026856.2	NM_026856.2		52397	51988895	NM_026856.2	Zfp644	NP_081132.2	ILMN_2740222	004150019	S	5334	GAAATAAATGTGCTGTGAGGAATGGACAGTACGGTGCAGGTGTCTTGGTC	5	-	107046066-107046115	5qE5	Mus musculus zinc finger protein 644 (Zfp644), mRNA.				BM-005; AA408882; D5Ertd689e; Zep-2; 1110068L01Rik	BM-005; AA408882; D5Ertd689e; Zep-2; 1110068L01Rik
Mus musculus	MEEBO	ILMN_211143	ILMN_211143	C1QL3	scl19669.2.1_3	NM_153155.1			23680959	NM_153155.1	C1ql3		ILMN_2612990	006130711	S	1505	TGCTCAAGATGCTGATCAGAATTACGACTATGCCAGTAACAGTGTGGTCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_195609	ILMN_195609	MIZ1	scl51251.1.72_30				27532973	NM_008602	Miz1		ILMN_1230393	005260347	S	4	GCCAAGTAAGGGTGATGTGGAAACCGTTGTTCCAAGTTAATGGTGATCGC										
Mus musculus	RefSeq	ILMN_257265	ILMN_257265	DEPDC6	NM_001037937.2	NM_001037937.2		97998	118130992	NM_001037937.2	Depdc6	NP_001033026.1	ILMN_3162536	001050348	I	3131	CAAGTGGGGAGACTAGGTCTGAGCAAATTCAGTGGTCTTCAAGTTGGAGC	15	+	55085588-55085637	15qD1	Mus musculus DEP domain containing 6 (Depdc6), transcript variant 2, mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA4200; D15Ertd336e; mKIAA4200; 4731402B04Rik; D15Ertd597e; R75183; 9130412E02Rik	KIAA4200; D15Ertd336e; mKIAA4200; 4731402B04Rik; D15Ertd597e; R75183; 9130412E02Rik
Mus musculus	MEEBO	ILMN_222078	ILMN_222078	ANG3	scl0219033.2_317	NM_007448.1			6671544	NM_007448.1	Ang3		ILMN_2744316	003310678	S	628	CCAGAAAATGAATTATCTGAAATATACTTCTCCTGATTTATAATGCACAG							Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194028	ILMN_255157	P2RY6	NM_183168.1	NM_183168.1		233571	34147202	NM_183168.1	P2ry6	NP_898991.1	ILMN_2663130	003710403	S	1823	CCCTCCTGTCCAAGAGCCCGGAAAGCTCACGTTCACATCCATTTGCCAAG	7	-	108086188-108086237	7qE3	Mus musculus pyrimidinergic receptor P2Y, G-protein coupled, 6 (P2ry6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of chloride ions across an epithelium [goid 30321] [evidence IDA]	 [goid 45029] [evidence IDA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with pyrimidine nucleotide, any compound consisting of a pyrimidine nucleoside esterified with (ortho)phosphate [goid 19103] [evidence IC ]	P2Y6; 2010204J23Rik	P2Y6; 2010204J23Rik
Mus musculus	Riken	ILMN_207309	ILMN_207309	4833445A15RIK	ri|4833445A15|PX00638F06|AK076536|1787					AK076536	4833445A15Rik		ILMN_2586625	000520280	S	1310	CCACGTGTCCCTGACTCTGATGAGAACACTTTCTAGTGCAGTGTTCCAGG										
Mus musculus	RefSeq	ILMN_223338	ILMN_223338	RPUSD2	NM_173450.2	NM_173450.2		271842	141802660	NM_173450.2	Rpusd2	NP_775626.1	ILMN_2762711	007380192	S	2611	GTGGAATATACTCTTTTTGTTGTGTTGTTTATTATTTATTCTGGACATAA	2	+	118865410-118865459	2qE5	Mus musculus RNA pseudouridylate synthase domain containing 2 (Rpusd2), mRNA.		The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]	4921503C21Rik; 9630001E10	4921503C21Rik; 9630001E10
Mus musculus	Riken	ILMN_202391	ILMN_202391	4930563C04RIK	ri|4930563C04|PX00035D17|AK016197|565					AK016197	4930563C04Rik		ILMN_2549257	004200228	S	473	CCCTGAGTTCCAGGGTGGGTGTATATCAAACTTGGAGAGATGAGGCAGAG										
Mus musculus	RefSeq	ILMN_219841	ILMN_219841	COMMD1	NM_144514.2	NM_144514.2		17846	84452160	NM_144514.2	Commd1	NP_653097.2	ILMN_1231658	004040739	S	419	GTCACGGCACTCAACTCAGATACACAGCCCTGTTGCCATAATAGAGCTGG	11	-	22856430-22856479	11qA3.2	Mus musculus COMM domain containing 1 (Commd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO];  [goid 19871] [evidence ISO]	Murr1; AI256843; U2/Mu	Murr1; AI256843; U2/Mu
Mus musculus	RefSeq	ILMN_219841	ILMN_219841	COMMD1	NM_144514.2	NM_144514.2		17846	84452160	NM_144514.2	Commd1	NP_653097.2	ILMN_1215639	002230161	S	323	GAGCCACAAGATAAAAATCCGAGAGAGTCTCATGAAGCAGAGCCGCTGGG	11	-	22856526-22856575	11qA3.2	Mus musculus COMM domain containing 1 (Commd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO];  [goid 19871] [evidence ISO]	Murr1; AI256843; U2/Mu	Murr1; AI256843; U2/Mu
Mus musculus	RefSeq	ILMN_219317	ILMN_219317	CEACAM15	XM_145393.5	XM_145393.5		101434	149256512	XM_145393.5	Ceacam15	XP_145393.4	ILMN_1224870	007400731	S	635	TACAAGCCCCTGAATGCCACTGAGAGGATCACGCTGTCACCTGAAAAGCG	7	-	17257386-17257435	7qA2	PREDICTED: Mus musculus CEA-related cell adhesion molecule 15 (Ceacam15), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_203637	ILMN_203637	NBEA	ri|4831436L24|PX00102L16|AK029239|4514					AK029239	Nbea		ILMN_1238002	001440465	S	4261	TCCAGTGGCAACCTTCTGGAAGATCTGCAGGGATGTGAGCCCTTCCAGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence NAS]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISS]; The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles [goid 6892] [evidence NAS]	Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence NAS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215053	ILMN_215053	DNASE1L1	NM_027109.1	NM_027109.1		69537	21312311	NM_027109.1	Dnase1l1	NP_081385.1	ILMN_1213982	007210719	S	1452	GGAACAAAGCTCCAGTAGAAATGGGCTCAGATCATACCTAAGATTTCTGC	X	-	71519529-71519557:71519707-71519727	XqA7.3	Mus musculus deoxyribonuclease 1-like 1 (Dnase1l1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]	G4.8; AI324885; 2310005K03Rik	G4.8; AI324885; 2310005K03Rik
Mus musculus	RefSeq	ILMN_196998	ILMN_233071	LOC665032	XM_991641.1	XM_991641.1		665032	94375298	XM_991641.1	LOC665032	XP_996735.1	ILMN_1224719	000060497	S	514	AGGCCCCTGTGAAGGCCCCATAGAAATGACTCCTGCCAGTGTGAAGACAG				5qF	PREDICTED: Mus musculus similar to ribosomal protein (LOC665032), mRNA.					
Mus musculus	MEEBO	ILMN_184389	ILMN_184389	TRBV30_X16695_T_CELL_RECEPTOR_BETA_VARIABLE_30_160	TRBV30_X16695_T_cell_receptor_beta_variable_30_160						TRBV30_X16695_T_cell_receptor_beta_variable_30_160		ILMN_1220853	000870068	S	3	GCCACATACGAGAGTGGATTCACCAAGGACAAGTTTCCAATCAGCCGGCC										
Mus musculus	RefSeq	ILMN_243922	ILMN_243922	ITPKB	NM_001081175.1	NM_001081175.1		320404	124487166	NM_001081175.1	Itpkb	NP_001074644.1	ILMN_3146287	004250129	A	2208	GATATGGGTGCTCAGGAGGATGGAGGGCTAGAGGAGATCCAAGGAAGCCC	1	+	182264146-182264195	1qH4	Mus musculus inositol 1,4,5-trisphosphate 3-kinase B (Itpkb), mRNA.		Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The process of T cell selection that occurs in the thymus [goid 45061] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IDA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IMP]	1110033J02Rik; E130307H12Rik	1110033J02Rik; E130307H12Rik
Mus musculus	RefSeq	ILMN_186767	ILMN_243922	ITPKB	NM_001081175.1	NM_001081175.1		320404	124487166	NM_001081175.1	Itpkb	NP_001074644.1	ILMN_2691135	004120039	S	4336	GTGTTTCTCCATGTAATTCGGTAGTTGCCAGAGTTGTTCAGAGGGCTGCC	1	+	182353025-182353074	1qH4	Mus musculus inositol 1,4,5-trisphosphate 3-kinase B (Itpkb), mRNA.		Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The process of T cell selection that occurs in the thymus [goid 45061] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IDA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IMP]	1110033J02Rik; E130307H12Rik	1110033J02Rik; E130307H12Rik
Mus musculus	RefSeq	ILMN_186767	ILMN_243922	ITPKB	NM_001081175.1	NM_001081175.1		320404	124487166	NM_001081175.1	Itpkb	NP_001074644.1	ILMN_2746729	002850452	S	2450	CATGGTGCAGTGGTCCCCCTTTGTCATGTCCTTCAAGAAGAAGTACCCCT	1	+	182342831-182342880	1qH4	Mus musculus inositol 1,4,5-trisphosphate 3-kinase B (Itpkb), mRNA.		Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The process of T cell selection that occurs in the thymus [goid 45061] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IDA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IMP]	1110033J02Rik; E130307H12Rik	1110033J02Rik; E130307H12Rik
Mus musculus	RefSeq	ILMN_188671	ILMN_188671	UBTD1	NM_145500.3	NM_145500.3		226122	133893218	NM_145500.3	Ubtd1	NP_663475.1	ILMN_2454692	004540202	S	1418	GCTGTCCCCAACTGTAACCCAGGCAGGGTGGGGTCCGAAGCCTGGTCATA	19	+	42109022-42109071	19qC3	Mus musculus ubiquitin domain containing 1 (Ubtd1), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		MGC28905; BC016129	MGC28905; BC016129
Mus musculus	RefSeq	ILMN_190317	ILMN_254656	ZC3H10	NM_134003.1	NM_134003.1		103284	19527225	NM_134003.1	Zc3h10	NP_598764.1	ILMN_2643115	000780402	S	1893	GTGGTCAGGAGCAAAGACCTCATATGAGCCTTCAGATGGTTCGGGGCCCA	10	-	127980882-127980931	10qD3	Mus musculus zinc finger CCCH type containing 10 (Zc3h10), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI790326	AI790326
Mus musculus	RefSeq	ILMN_188494	ILMN_253244	MMP28	NM_080453.2	NM_080453.2		118453	118131115	NM_080453.2	Mmp28	NP_536701.1	ILMN_1260453	003420470	S	2223	CCCTTCTCAATAGAAGCACATGGGTACTGGGTGCTGGAGACACAAGGACC	11	-	83255416-83255465	11qC	Mus musculus matrix metallopeptidase 28 (epilysin) (Mmp28), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISO]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D130023P12	D130023P12
Mus musculus	RefSeq	ILMN_253244	ILMN_253244	MMP28	NM_080453.2	NM_080453.2		118453	118131115	NM_080453.2	Mmp28	NP_536701.1	ILMN_3159029	005870703	A	2082	GAGGCTCTCTTTTGGTTCAGGATGCAGAGCAGGAGGGAATGTGTTCCTCC	11	-	83255557-83255606	11qC	Mus musculus matrix metallopeptidase 28 (epilysin) (Mmp28), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISO]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D130023P12	D130023P12
Mus musculus	RefSeq	ILMN_201412	ILMN_201412	LOC385118	XM_358067.1	XM_358067.1			38093571	XM_358067.1	LOC385118		ILMN_1258226	004880441	S	363	GCACTGTGGCAGCAGTTTGGAGCAATGTGACACCAGTCTAGAGCACTGTG										
Mus musculus	MEEBO	ILMN_185294	ILMN_185294	IGHV1S133_AF304553_IG_HEAVY_VARIABLE_1S133_89	IGHV1S133_AF304553_Ig_heavy_variable_1S133_89						IGHV1S133_AF304553_Ig_heavy_variable_1S133_89		ILMN_2425832	001770241	S	16	GTGGGTAAAGCAGAGGCCTGGACAGGGCCTTGAGTGGATTGGGGTGATTA										
Mus musculus	RefSeq	ILMN_184331	ILMN_238635	A730037C10RIK	NM_177203.1	NM_177203.1		320604	28893224	NM_177203.1	A730037C10Rik	NP_796177.1	ILMN_1219547	002230315	S	2651	GATGGCCCCACGGCTATGTATTTATGGACAGCACTAACTGGCTTCAATGG	3	+	54976619-54976668	3qC	Mus musculus RIKEN cDNA A730037C10 gene (A730037C10Rik), mRNA.					
Mus musculus	Riken	ILMN_204068	ILMN_204068	A630091L03RIK	ri|A630091L03|PX00148H24|AK042438|1823					AK042438	A630091L03Rik		ILMN_1251079	000460653	S	1416	CAGGTGAAAAACAGGTTCAGAGAACGCCAAACCGCCTGGCTGAGTGCCAG										
Mus musculus	RefSeq	ILMN_216184	ILMN_216184	STAU1	NM_011490.2	NM_011490.2		20853	118130158	NM_011490.2	Stau1	NP_035620.1	ILMN_2668197	004490204	S	2646	GGGCCCAATACAGTCAATTCCAACCTCTAAGTCGGGGAAAGGTGACAGGT	2	-	166773937-166773986	2qH3	Mus musculus staufen (RNA binding protein) homolog 1 (Drosophila) (Stau1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process by which mRNA is transported to, or maintained in, a specific location within the cell [goid 8298] [evidence IDA]	Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]	AW549911; Stau; C85792; 5830401L18Rik	AW549911; Stau; C85792; 5830401L18Rik
Mus musculus	Riken	ILMN_202943	ILMN_202943	A930013G23RIK	ri|A930013G23|PX00066A07|AK044444|2263					AK044444	A930013G23Rik		ILMN_1258904	005490349	S	2078	AACAGAGGTGACTCAGCTGACATCTCTCTTGTACCCTAGCAACCCCTAGG										
Mus musculus	Riken	ILMN_207139	ILMN_207139	F730019F02RIK	ri|F730019F02|PL00003A18|AK089384|3715					AK089384	F730019F02Rik		ILMN_1246317	001050291	S	3417	AGCCCCAGGGTTGAACAGAGAAAGGGCAGGGGGAGAAGACATTGGGTGGT										
Mus musculus	RefSeq	ILMN_220584	ILMN_220584	OLFR1239	NM_146970.1	NM_146970.1		258972	22128990	NM_146970.1	Olfr1239	NP_667181.1	ILMN_2969402	005260148	S	556	GCCTGCACAGACACCTATGTTATTGGCCTCACAGTTGTTGCCAATGATGG	2	-	89257963-89258012	2qE1	Mus musculus olfactory receptor 1239 (Olfr1239), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-3	MOR231-3
Mus musculus	RefSeq	ILMN_198594	ILMN_249818	LOC236831	XR_001889.1	XR_001889.1		236831	94407476	XR_001889.1	LOC236831		ILMN_1253568	005340392	S	765	TAGCTATGATGAGATCCGTCGCCAGTGGGGAGGCAACGTGCTGGGTCCTC	X	-	56967002-56967051	XqA6	PREDICTED: Mus musculus similar to 60S ribosomal protein L7a (LOC236831), mRNA.					
Mus musculus	RefSeq	ILMN_201470	ILMN_320221	LOC100045338	XM_001474097.1	XM_001474097.1		100045338	149251644	XM_001474097.1	LOC100045338	XP_001474147.1	ILMN_1227165	000270349	S	487	GATGTCAATCTGAAAGGTGCAGTACCCAGGGAAGATATGGAGCAGGTTGG					PREDICTED: Mus musculus similar to 3-beta-hydroxysteroid dehydrogenase/delta-5-delta-4-isomerase (LOC100045338), mRNA.					
Mus musculus	RefSeq	ILMN_197833	ILMN_243560	LOC230639	XM_904638.1	XM_904638.1		230639	82894627	XM_904638.1	LOC230639	XP_909731.1	ILMN_1227787	000270326	S	1224	CACAGTTCTGCTCCACTTTTATGCTCTTCACCACAACCCAAAAGTGTGGC				4qD1	PREDICTED: Mus musculus similar to fatty acid omega-hydroxylase; CYP4A11 (LOC230639), mRNA.					
Mus musculus	RefSeq	ILMN_191731	ILMN_210697	EDEM1	NM_138677.2	NM_138677.2		192193	119709811	NM_138677.2	Edem1	NP_619618.1	ILMN_1229422	006330136	S	521	ATGTAGTTGTCATAGCCGAAGACGAACATGCCCCGCGCCAGGTCGCGCAT	6	+	108779155-108779204	6qE2	Mus musculus ER degradation enhancer, mannosidase alpha-like 1 (Edem1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IDA]	A130059K23Rik; mKIAA0212; KIAA0212; EDEM	A130059K23Rik; mKIAA0212; KIAA0212; EDEM
Mus musculus	RefSeq	ILMN_210697	ILMN_210697	EDEM1	NM_138677.2	NM_138677.2		192193	119709811	NM_138677.2	Edem1	NP_619618.1	ILMN_1244297	004120689	S	472	ATGCGCGACCTGGCGCGGGGCATGTTCGTCTTCGGCTATGACAACTACAT	6	+	108779106-108779155	6qE2	Mus musculus ER degradation enhancer, mannosidase alpha-like 1 (Edem1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IDA]	A130059K23Rik; mKIAA0212; KIAA0212; EDEM	A130059K23Rik; mKIAA0212; KIAA0212; EDEM
Mus musculus	RefSeq	ILMN_210697	ILMN_210697	EDEM1	NM_138677.2	NM_138677.2		192193	119709811	NM_138677.2	Edem1	NP_619618.1	ILMN_1253171	002570767	S	5763	TCTTTTATAAGCATACTAAGGAATATCTTGTTCTTTGAAATTTATTAGGA	6	+	108809255-108809304	6qE2	Mus musculus ER degradation enhancer, mannosidase alpha-like 1 (Edem1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IDA]	A130059K23Rik; mKIAA0212; KIAA0212; EDEM	A130059K23Rik; mKIAA0212; KIAA0212; EDEM
Mus musculus	RefSeq	ILMN_194341	ILMN_184559	ZEB2	NM_015753.3	NM_015753.3		24136	125490363	NM_015753.3	Zeb2	NP_056568.2	ILMN_1227793	006770072	S	8865	TGGCTGTTTAAATCTTTGTTACCTTCGCTGTGAATTGAAATTGTACATAT	2	-	44839352-44839401	2qB	Mus musculus zinc finger E-box binding homeobox 2 (Zeb2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IC ]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The creation of greater cell numbers in the forebrain due to cell division of progenitor cells [goid 21846] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30177] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of JUN kinase activity [goid 43507] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D130016B08Rik; Zfxh1b; SIP1; Zfhx1b; mKIAA0569; 9130203F04Rik; Zfx1b	D130016B08Rik; Zfxh1b; SIP1; Zfhx1b; mKIAA0569; 9130203F04Rik; Zfx1b
Mus musculus	RefSeq	ILMN_184559	ILMN_184559	ZEB2	NM_015753.3	NM_015753.3		24136	125490363	NM_015753.3	Zeb2	NP_056568.2	ILMN_2419650	000290601	S	5489	AGAGGGACTGTTAAATACAATGTATGATACCATGACAAAAATCTTTCCTG	2	-	44842728-44842777	2qB	Mus musculus zinc finger E-box binding homeobox 2 (Zeb2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IC ]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The creation of greater cell numbers in the forebrain due to cell division of progenitor cells [goid 21846] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30177] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of JUN kinase activity [goid 43507] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D130016B08Rik; Zfxh1b; SIP1; Zfhx1b; mKIAA0569; 9130203F04Rik; Zfx1b	D130016B08Rik; Zfxh1b; SIP1; Zfhx1b; mKIAA0569; 9130203F04Rik; Zfx1b
Mus musculus	RefSeq	ILMN_184559	ILMN_184559	ZEB2	NM_015753.3	NM_015753.3		24136	125490363	NM_015753.3	Zeb2	NP_056568.2	ILMN_1232121	002850703	S	4272	CTTCCAGGAAGCTGTAGAGAGGGACAGAAGGGGCAGTTCAGCCAAGACAG	2	-	44843945-44843994	2qB	Mus musculus zinc finger E-box binding homeobox 2 (Zeb2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IC ]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The creation of greater cell numbers in the forebrain due to cell division of progenitor cells [goid 21846] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30177] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of JUN kinase activity [goid 43507] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D130016B08Rik; Zfxh1b; SIP1; Zfhx1b; mKIAA0569; 9130203F04Rik; Zfx1b	D130016B08Rik; Zfxh1b; SIP1; Zfhx1b; mKIAA0569; 9130203F04Rik; Zfx1b
Mus musculus	RefSeq	ILMN_220094	ILMN_220094	RPS2	NM_008503.2	NM_008503.2		16898	18087804	NM_008503.2	Rps2	NP_032529.2	ILMN_2946616	002600632	S	191	AGCTGAAGACAAGGAGTGGATCCCCGTCACCAAGCTGGGCCGTCTGGTTA	17	+	24448039-24448052:24448134-24448169	17qA3.3	Mus musculus ribosomal protein S2 (Rps2), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC118038; Llrep3; MGC118037	MGC118038; Llrep3; MGC118037
Mus musculus	MEEBO	ILMN_196224	ILMN_196224	2700069A02RIK	scl42883.15_21				51767005	XM_484169	2700069A02Rik		ILMN_2522723	005870114	S	20	ATTTGTTCACAGATATCTATTTTATTTAGATTGGGAATAAATTGAGTTAT										
Mus musculus	Riken	ILMN_201828	ILMN_201828	CGEF2-PENDING	ri|5730402K07|PX00002A06|AK017479|693					AK017479	Cgef2-pending		ILMN_1247893	005310274	S	623	GCACAGCGACCTTCTGAGCAAAGGAAGCTCTCCATCTGCAGTCAACAGAG										
Mus musculus	MEEBO	ILMN_219943	ILMN_219943	A030012M09RIK	scl00319263.2_23	NM_183028.1			33942103	NM_183028.1	A030012M09Rik		ILMN_2767322	000840554	S	2053	GGGACCTCCAGCAGCAGGGGGAATGATATGATCAGTAGAGACATTTTAGC										
Mus musculus	Riken	ILMN_203433	ILMN_203433	C430014M02RIK	ri|C430014M02|PX00078P07|AK049459|3345					AK049459	C430014M02Rik		ILMN_2557265	001820465	S	3284	GCCAGCCTCCTCCACATAATGAGCTCCAGGTCAGCCAACATTACATAGTC										
Mus musculus	RefSeq	ILMN_213757	ILMN_257982	OLFR876	NM_146883.1	NM_146883.1		258883	22129116	NM_146883.1	Olfr876	NP_667094.1	ILMN_2640485	007050543	S	560	CCTGTACTAGCACCTATGTGAATGAACTGGTAGTCTTTATTTTTGTGAGT	9	+	37612057-37612106	9qA4	Mus musculus olfactory receptor 876 (Olfr876), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR161-1	MOR161-1
Mus musculus	RefSeq	ILMN_219528	ILMN_212507	PVR	NM_027514.1	NM_027514.1		52118	28076964	NM_027514.1	Pvr	NP_081790.1	ILMN_1223299	002630209	S	1002	TAACACGGTCATTGTGTGCGAAGTCACCAATGCCCTAGGGTCTGGGCAGG	7	-	20495965-20496014	7qA3	Mus musculus poliovirus receptor (Pvr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tage4; mE4; HVED; D7Ertd458e; 3830421F03Rik; PVS; Taa1; necl-5; CD155	Tage4; mE4; HVED; D7Ertd458e; 3830421F03Rik; PVS; Taa1; necl-5; CD155
Mus musculus	RefSeq	ILMN_212507	ILMN_212507	PVR	NM_027514.1	NM_027514.1		52118	28076964	NM_027514.1	Pvr	NP_081790.1	ILMN_2627296	000650458	S	2001	TTTAACCATCACCCAACCCCTGCTCCCTTCCATATCTTCTTTCAATCCAT	7	-	20489712-20489761	7qA3	Mus musculus poliovirus receptor (Pvr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tage4; mE4; HVED; D7Ertd458e; 3830421F03Rik; PVS; Taa1; necl-5; CD155	Tage4; mE4; HVED; D7Ertd458e; 3830421F03Rik; PVS; Taa1; necl-5; CD155
Mus musculus	RefSeq	ILMN_212507	ILMN_212507	PVR	NM_027514.1	NM_027514.1		52118	28076964	NM_027514.1	Pvr	NP_081790.1	ILMN_2972585	004850039	S	2416	GGCCAGAAGAAGGCACAAAATCTTGAGCCAGGCTTACATGCACTTGTGAG	7	-	20489297-20489346	7qA3	Mus musculus poliovirus receptor (Pvr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tage4; mE4; HVED; D7Ertd458e; 3830421F03Rik; PVS; Taa1; necl-5; CD155	Tage4; mE4; HVED; D7Ertd458e; 3830421F03Rik; PVS; Taa1; necl-5; CD155
Mus musculus	RefSeq	ILMN_216263	ILMN_320964	LOC100046771	XM_001476782.1	XM_001476782.1		100046771	149265302	XM_001476782.1	LOC100046771	XP_001476832.1	ILMN_2669114	003170008	S	438	GATGGAGGACCGCAAGGCTGCTAAAATTTTGGAGGAACGTATACACGAGG					PREDICTED: Mus musculus similar to SH2 domain containing 4B (LOC100046771), mRNA.					
Mus musculus	RefSeq	ILMN_197399	ILMN_197399	LOC218767	XM_127566.3	XM_127566.3			38075580	XM_127566.3	LOC218767		ILMN_1254944	007000246	S	577	AGTGAGTTGAGCAAGCACGCTCACGCTCTCACCACCGAGGGCATCTTCCA										
Mus musculus	MEEBO	ILMN_216286	ILMN_216286	1600014E20RIK	scl18634.2_560	NM_028045.1			21312565	NM_028045.1	1600014E20Rik		ILMN_2669388	007100377	S	1449	CGCACTGTGTAGGACTCACTGTATACTAGAAGCTCATTCGGCCACTCCCT										
Mus musculus	RefSeq	ILMN_186609	ILMN_186609	VAV2	NM_009500.1	NM_009500.1		22325	6678554	NM_009500.1	Vav2	NP_033526.1	ILMN_1225994	004210333	S	1	GGAACAACTGTACATTTGCCAATGGGTTTTCCCCACAAGACTACGGTTTT	2	-	27282297-27282346	2qA3	Mus musculus vav 2 oncogene (Vav2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IGI]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IGI]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IMP]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	AI847175; 2810040F13Rik	AI847175; 2810040F13Rik
Mus musculus	RefSeq	ILMN_186609	ILMN_186609	VAV2	NM_009500.1	NM_009500.1		22325	6678554	NM_009500.1	Vav2	NP_033526.1	ILMN_1223067	000730326	S	2687	ACAACTTTTCTTTTCTCAGTCCTCAGGGCCTCAGCTTTGCCCCCCAGGCC	2	-	27123686-27123735	2qA3	Mus musculus vav 2 oncogene (Vav2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IGI]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IGI]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IMP]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	AI847175; 2810040F13Rik	AI847175; 2810040F13Rik
Mus musculus	RefSeq	ILMN_186609	ILMN_186609	VAV2	NM_009500.1	NM_009500.1		22325	6678554	NM_009500.1	Vav2	NP_033526.1	ILMN_2436992	004210491	S	3215	GCATGTGTGGTTGACAGCAAAGGTCAGAAGCCACTGCCTGCATCTCTGGT	2	-	27119374-27119423	2qA3	Mus musculus vav 2 oncogene (Vav2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IGI]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IGI]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IMP]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	AI847175; 2810040F13Rik	AI847175; 2810040F13Rik
Mus musculus	RefSeq	ILMN_186609	ILMN_186609	VAV2	NM_009500.1	NM_009500.1		22325	6678554	NM_009500.1	Vav2	NP_033526.1	ILMN_2971753	001110156	S	3445	GTAGCACACACTAGGCTCAGCCGGGAGCCAGAGCTTGCACAACCGCTCGT				2qA3	Mus musculus vav 2 oncogene (Vav2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IGI]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IGI]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IMP]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	AI847175; 2810040F13Rik	AI847175; 2810040F13Rik
Mus musculus	RefSeq	ILMN_188407	ILMN_316313	LOC100044008	XM_001474723.1	XM_001474723.1		100044008	149257068	XM_001474723.1	LOC100044008	XP_001474773.1	ILMN_2452426	004260392	S	1597	TGTTCGTAGTACAGGCCTTAGAATTCATGAAAGGATCCACACTGGTGAGA	7	+	28534796-28534845		PREDICTED: Mus musculus similar to Zinc finger protein 60 (LOC100044008), mRNA.					
Mus musculus	RefSeq	ILMN_216901	ILMN_316313	LOC100044008	XM_001474723.1	XM_001474723.1		100044008	149257068	XM_001474723.1	LOC100044008	XP_001474773.1	ILMN_2676674	002070554	S	5344	TCCTGCAAGATACTGATAGTCTATCTCATGCTTGTGTTACATGGAAGCAC	7	+	28538543-28538592		PREDICTED: Mus musculus similar to Zinc finger protein 60 (LOC100044008), mRNA.					
Mus musculus	RefSeq	ILMN_188407	ILMN_316313	LOC100044008	XM_001474723.1	XM_001474723.1		100044008	149257068	XM_001474723.1	LOC100044008	XP_001474773.1	ILMN_2516006	007200278	S	2136	TGAAACACTATGCAAGGAGTGTGTAAACATTTATAGAATTCATTCTGAAA	7	+	28535335-28535384		PREDICTED: Mus musculus similar to Zinc finger protein 60 (LOC100044008), mRNA.					
Mus musculus	RefSeq	ILMN_210623	ILMN_210623	4933424B01RIK	NM_138757.1	NM_138757.1		71177	20270294	NM_138757.1	4933424B01Rik	NP_620096.1	ILMN_2833356	007510014	S	2638	GGAGACAACAGAAAATGGGAAAGCCAGCCGCCAGTGAAGAGTGACTTGAG	6	-	146507097-146507115:146507116-146507146	6qG3	Mus musculus RIKEN cDNA 4933424B01 gene (4933424B01Rik), mRNA.				MGC28965	MGC28965
Mus musculus	RefSeq	ILMN_215632	ILMN_215632	ACE2	NM_027286.3	NM_027286.3		70008	142389001	NM_027286.3	Ace2	NP_081562.2	ILMN_1241584	005340450	S	2407	GCAGGATTCCAAAACAGTGATGATGCTCAGACTTCCTTTTAGCAAAGCAC	X	+	160625491-160625532:160625533-160625540	XqF5	Mus musculus angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 (Ace2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the release of C-terminal dipeptides from a polypeptide chain [goid 8241] [evidence IEA]	2010305L05Rik	2010305L05Rik
Mus musculus	RefSeq	ILMN_219803	ILMN_219803	COMMD7	NM_133850.1	NM_133850.1		99311	29789332	NM_133850.1	Commd7	NP_598611.1	ILMN_1229682	002140605	S	3376	GGCAGGCCTTTCGAGGCCATCTTACATTGTTTGGTTCCAGAAAACCAACC	2	-	153444611-153444660	2qH1	Mus musculus COMM domain containing 7 (Commd7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW060956; 2310010I22Rik; mU3	AW060956; 2310010I22Rik; mU3
Mus musculus	MEEBO	ILMN_218080	ILMN_218080	NDUFB10	scl50198.3.1_17	XM_128594.4			38082079	XM_128594.4	Ndufb10		ILMN_2691261	002100386	S	578	TCTGGCAAAGCAGAAGCAGAGGATGCTGGAAGAAAGGAAGGCTGCGAGGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]			
Mus musculus	Riken	ILMN_205775	ILMN_205775	PFTK1	ri|D130046P17|PX00184O12|AK051411|4153					AK051411	Pftk1		ILMN_2575135	003850671	S	3948	TGATGAGGCCGTGGACCCCACAACTTGACATCACTGAACTGCTTCTCCAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]		
Mus musculus	RefSeq	ILMN_211563	ILMN_211563	PMPCA	NM_173180.3	NM_173180.3		66865	118129895	NM_173180.3	Pmpca	NP_775272.1	ILMN_1227913	002810010	S	1049	AGGAGGGGGCTCCTTCTCAGCTGGAGGGCCTGGCAAAGGCATGTTCTCCA	2	+	26248650-26248699	2qA3	Mus musculus peptidase (mitochondrial processing) alpha (Pmpca), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Alpha-MPP; P-55; 4933435E07Rik; 1200002L24Rik	Alpha-MPP; P-55; 4933435E07Rik; 1200002L24Rik
Mus musculus	RefSeq	ILMN_214064	ILMN_211563	PMPCA	NM_173180.3	NM_173180.3		66865	118129895	NM_173180.3	Pmpca	NP_775272.1	ILMN_2643846	000610026	S	2438	CCCAGTTTGGCCCAAGATCAAGATCATAAAGTCTTAGGGGTCGGGGGGCA	2	+	26251954-26252003	2qA3	Mus musculus peptidase (mitochondrial processing) alpha (Pmpca), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Alpha-MPP; P-55; 4933435E07Rik; 1200002L24Rik	Alpha-MPP; P-55; 4933435E07Rik; 1200002L24Rik
Mus musculus	RefSeq	ILMN_214641	ILMN_214641	CCDC52	NM_144550.3	NM_144550.3		212514	142366359	NM_144550.3	Ccdc52	NP_653133.2	ILMN_2650238	000240576	S	4029	TGATAACTGCCATGCTATGTTAGTAATTTTCAACTTGAGTGAGTTGGGAG	16	+	44388348-44388397	16qB4	Mus musculus coiled-coil domain containing 52 (Ccdc52), mRNA.				D16Ertd480e	D16Ertd480e
Mus musculus	RefSeq	ILMN_188794	ILMN_329163	LOC100044411	XM_001472216.1	XM_001472216.1		100044411	149261822	XM_001472216.1	LOC100044411	XP_001472266.1	ILMN_2455771	007050091	S	188	ACTCTGGCGCTGGTCAAGTCACAGTACACCGAGGAAACCATCACATACAC					PREDICTED: Mus musculus similar to Epidermal growth factor-containing fibulin-like extracellular matrix protein 1 (LOC100044411), mRNA.					
Mus musculus	RefSeq	ILMN_201096	ILMN_201096	LOC384775	XM_357859.1	XM_357859.1			38089102	XM_357859.1	LOC384775		ILMN_1239179	001570400	S	2	TGTTACAAGGTTTGACTGTTAGGGCCACCAAGCCAGGGGAGACCAAAAAG										
Mus musculus	RefSeq	ILMN_209485	ILMN_209485	ENTPD3	NM_178676.2	NM_178676.2		215446	31341026	NM_178676.2	Entpd3	NP_848791.1	ILMN_2896322	004830327	S	3278	GTATGGCAGCTCAAAACAGCTTGTGGCTCTTCTAGCCTTCTCCAGCACTG	9	+	120416874-120416923	9qF4	Mus musculus ectonucleoside triphosphate diphosphohydrolase 3 (Entpd3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a nucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with diphosphate on its glycose moiety [goid 9134] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a nucleoside triphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with triphosphate on its glycose moiety [goid 9143] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IDA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IDA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IDA]	6330566B20; HB6; NTPDase-3; Cd39l3	6330566B20; HB6; NTPDase-3; Cd39l3
Mus musculus	RefSeq	ILMN_221772	ILMN_221772	OTT	NM_011022.1	NM_011022.1		18422	33859585	NM_011022.1	Ott	NP_035152.1	ILMN_3086278	004180711	A	1316	GAGACAGTTGAACTGAATGTAGCGCTAGAAGACGGCTACAGCAGTGCTGA	X	+	145564421-145564444:145565251-145565276	XqF3	Mus musculus ovary testis transcribed (Ott), mRNA.				AV272316; MGC129142	AV272316; MGC129142
Mus musculus	RefSeq	ILMN_221772	ILMN_221772	OTT	NM_011022.1	NM_011022.1		18422	33859585	NM_011022.1	Ott	NP_035152.1	ILMN_3015028	006040368	I	1457	ATAGAATGAGAAGACCTGAAGACTAAACTGCCTTTTCCTTCGGGCGTTGG	X	+	145572124-145572173	XqF3	Mus musculus ovary testis transcribed (Ott), mRNA.				AV272316; MGC129142	AV272316; MGC129142
Mus musculus	RefSeq	ILMN_223301	ILMN_313454	ALPK1	XM_001479503.1	XM_001479503.1		71481	149251874	XM_001479503.1	Alpk1	XP_001479553.1	ILMN_2762222	004730681	S	619	GCAATACAAACAAGCCATGAGCCCAGAGGACAAAACAAACCTGCAAGATG				3qG2	PREDICTED: Mus musculus alpha-kinase 1 (Alpk1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	MEEBO	ILMN_196263	ILMN_196263	1700072I22RIK	scl40841.3.1_14						1700072I22Rik		ILMN_1244632	000150242	S	20	CACCCCCACCCCCGCCCTGCCTTAAGCTGAGCAGAATAATGAGCAAAGGA										
Mus musculus	RefSeq	ILMN_219715	ILMN_219715	GTF2H5	NM_181392.2	NM_181392.2		66467	142346453	NM_181392.2	Gtf2h5	NP_852057.1	ILMN_1223234	005960025	S	925	GGTCACGTTTTCCTATCAAGGCAGGTACTCCTTGATAGTGCAAGGTACAG	17	+	6085276-6085325	17qA1	Mus musculus general transcription factor IIH, polypeptide 5 (Gtf2h5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2700017P07Rik; D17Wsu155e; 2810432H05Rik	2700017P07Rik; D17Wsu155e; 2810432H05Rik
Mus musculus	MEEBO	ILMN_218662	ILMN_218662	3632413B07RIK	scl0003203.1_308	NM_172270.1			26986574	NM_172270.1	3632413B07Rik		ILMN_2698673	006100333	S	2085	GGAATTCTTTTTCCTGGTGATCTCTAAAGTGCTGGCTGCGAGGATCTGAG										
Mus musculus	RefSeq	ILMN_216527	ILMN_216527	SOCS4	NM_080843.2	NM_080843.2		67296	49355821	NM_080843.2	Socs4	NP_543119.2	ILMN_1249426	006280484	S	1287	CGCTCTTGTCCACTCCCTTAATCCGGACGTTCCCCTTTTCCTTGCAGCAT	14	+	47910399-47910448	14qC1	Mus musculus suppressor of cytokine signaling 4 (Socs4), mRNA.		Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU015727; MGC143730; AU015859; A730004F22Rik; Socs7; AI427843; MGC143731; 3110032M18Rik	AU015727; MGC143730; AU015859; A730004F22Rik; Socs7; AI427843; MGC143731; 3110032M18Rik
Mus musculus	RefSeq	ILMN_215272	ILMN_215272	PGR	NM_008829.2	NM_008829.2		18667	112363097	NM_008829.2	Pgr	NP_032855.2	ILMN_2657452	007040296	S	3366	CCCAAGATCCTGGCGGGCATGGTGAAGCCGCTCCTCTTTCACAAAAAGTG	9	+	8965088-8965137	9qA1	Mus musculus progesterone receptor (Pgr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Any process that modulates the frequency, rate or extent of epithelial cell proliferation [goid 50678] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any series of molecular signals generated as a consequence of a progesterone binding to its receptor [goid 50847] [evidence IDA]; The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2070] [evidence IMP]	A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IMP]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]	PR-B; 9930019P03Rik; PR; NR3C3; PR-A	PR-B; 9930019P03Rik; PR; NR3C3; PR-A
Mus musculus	RefSeq	ILMN_212114	ILMN_212114	2210016L21RIK	NM_028211.1	NM_028211.1		72357	39930440	NM_028211.1	2210016L21Rik	NP_082487.1	ILMN_2622891	006860671	S	384	TTCACATCCATCCCCGGAGGCCATAAGAAGGAAGCCTCTCCAAGACCCTG	5	+	115397185-115397234	5qF	Mus musculus RIKEN cDNA 2210016L21 gene (2210016L21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212114	ILMN_212114	2210016L21RIK	NM_028211.1	NM_028211.1		72357	39930440	NM_028211.1	2210016L21Rik	NP_082487.1	ILMN_1247760	006590201	S	386	TCACATCCATCCCCGGAGGCCATAAGAAGGAAGCCTCTCCAAGACCCTGC	5	+	115397187-115397236	5qF	Mus musculus RIKEN cDNA 2210016L21 gene (2210016L21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_224174	ILMN_212114	2210016L21RIK	NM_028211.1	NM_028211.1		72357	39930440	NM_028211.1	2210016L21Rik	NP_082487.1	ILMN_1251123	006220243	S	1261	CCTGCATGCAGCCTAGCACTAAGCAGGTGCTCTGGCACCTGACTGTCAGT	5	+	115398490-115398539	5qF	Mus musculus RIKEN cDNA 2210016L21 gene (2210016L21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216531	ILMN_216531	MCPT1	NM_008570.1	NM_008570.1		17224	6678835	NM_008570.1	Mcpt1	NP_032596.1	ILMN_1258979	002680215	S	754	AAACAGTCATAAATGGCAAGTAGCTGAGAAGTCTGACCAGCCTGAGACAG	14	+	56638954-56638976:56638977-56639003	14qC3	Mus musculus mast cell protease 1 (Mcpt1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	AV080368; Mcp-1	AV080368; Mcp-1
Mus musculus	RefSeq	ILMN_249528	ILMN_249528	PCNXL3	NM_144868.2	NM_144868.2		104401	118130055	NM_144868.2	Pcnxl3	NP_659117.1	ILMN_3068699	003120286	I	1665	GCTTTATGGCTTCTGCCTTGGGGCCATCAAGACACCTTGGCCAGAGCAGC	19	-	5678733-5678752:5678912-5678941	19qA	Mus musculus pecanex-like 3 (Drosophila) (Pcnxl3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			KIAA4073; mKIAA4073	KIAA4073; mKIAA4073
Mus musculus	RefSeq	ILMN_218683	ILMN_218683	SYNPR	NM_028052.3	NM_028052.3		72003	141802628	NM_028052.3	Synpr	NP_082328.2	ILMN_2698947	000650092	S	2350	AGTTTAGCACAAAATAGGCTGTCTTAAATACTATCTGTAACTAGTTTCTT	14	+	14447782-14447831	14qA1	Mus musculus synaptoporin (Synpr), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a synaptic vesicle membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30285] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	SPO; 1500003F20Rik	SPO; 1500003F20Rik
Mus musculus	RefSeq	ILMN_185502	ILMN_185502	TRAF6	NM_009424.2	NM_009424.2		22034	38348245	NM_009424.2	Traf6	NP_033450.2	ILMN_1259162	005220482	S	2246	GTCAGGGTACCCCTTCACTGTGCTTCCATGGGCTATTTTGTCCGTGTACT	2	+	101537903-101537952	2qE2	Mus musculus Tnf receptor-associated factor 6 (Traf6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence TAS]	2310003F17Rik; AI851288; C630032O20Rik	2310003F17Rik; AI851288; C630032O20Rik
Mus musculus	RefSeq	ILMN_185502	ILMN_185502	TRAF6	NM_009424.2	NM_009424.2		22034	38348245	NM_009424.2	Traf6	NP_033450.2	ILMN_2960750	001780367	S	5392	TTTCTCTGTGGGTCCTCTGTGTCTTTGATGTTTTAAATTGCTCAGCCCCG	2	+	101541049-101541098	2qE2	Mus musculus Tnf receptor-associated factor 6 (Traf6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence TAS]	2310003F17Rik; AI851288; C630032O20Rik	2310003F17Rik; AI851288; C630032O20Rik
Mus musculus	RefSeq	ILMN_185502	ILMN_185502	TRAF6	NM_009424.2	NM_009424.2		22034	38348245	NM_009424.2	Traf6	NP_033450.2	ILMN_2427560	005900468	S	5339	GGACACTCTCGGTCACAAGCGTTGAAGTCACTCAAAAAGGACTAAGCTAG	2	+	101540996-101541045	2qE2	Mus musculus Tnf receptor-associated factor 6 (Traf6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence TAS]	2310003F17Rik; AI851288; C630032O20Rik	2310003F17Rik; AI851288; C630032O20Rik
Mus musculus	RefSeq	ILMN_185502	ILMN_185502	TRAF6	NM_009424.2	NM_009424.2		22034	38348245	NM_009424.2	Traf6	NP_033450.2	ILMN_1239417	001410433	S	8	GCTGACTGACCACTTAAGTTCAATTTTATTTCTGATCGTTTAGCTACCTG	2	+	101518604-101518653	2qE2	Mus musculus Tnf receptor-associated factor 6 (Traf6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence TAS]	2310003F17Rik; AI851288; C630032O20Rik	2310003F17Rik; AI851288; C630032O20Rik
Mus musculus	Riken	ILMN_207331	ILMN_207331	5730521N16RIK	ri|5730521N16|PX00644F20|AK077686|1971					AK077686	5730521N16Rik		ILMN_2586804	000240678	S	1468	TGGGCGGTAGCCAAAAAGGTGAAACTGTTTTGTGTGAGGAAGTAGGTACT										
Mus musculus	Riken	ILMN_207297	ILMN_207297	4732471K23RIK	ri|4732471K23|PX00637J04|AK076373|2726					AK076373	4732471K23Rik		ILMN_1241819	004850711	S	2630	CCCTCCATAGGGATCTGGCATGCACCCCCAGAAAAGGCCAGAGACTGCAT										
Mus musculus	MEEBO	ILMN_215551	ILMN_215551	5330439J01RIK	scl0109205.1_44				40018607	NM_175407	5330439J01Rik		ILMN_2719324	004810348	S	2277	AAAAAGCTACTGTCGTCCGAGGAGCCTGTGGTGAACGAGCTGGAGTCGGT										
Mus musculus	RefSeq	ILMN_221472	ILMN_221472	PER1	NM_011065.2	NM_011065.2		18626	31559795	NM_011065.2	Per1	NP_035195.1	ILMN_2813484	002570037	S	4341	GGGCGGGTCTTCGGTTAAGGTTGCTGACAAGCTGCTGAAGTGGTCTGTCC	11	+	68925826-68925875	11qB3	Mus musculus period homolog 1 (Drosophila) (Per1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC102121; Per; mPer1; m-rigui	MGC102121; Per; mPer1; m-rigui
Mus musculus	RefSeq	ILMN_221472	ILMN_221472	PER1	NM_011065.2	NM_011065.2		18626	31559795	NM_011065.2	Per1	NP_035195.1	ILMN_2813487	000020475	S	4281	CAGAGTGGAAGTTCTCAGCCCCATTTGGAGGATTGTCCACGCCCGTCCCA	11	+	68925766-68925815	11qB3	Mus musculus period homolog 1 (Drosophila) (Per1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC102121; Per; mPer1; m-rigui	MGC102121; Per; mPer1; m-rigui
Mus musculus	RefSeq	ILMN_219122	ILMN_219122	NELL2	NM_016743.2	NM_016743.2		54003	133922560	NM_016743.2	Nell2	NP_058023.2	ILMN_1241551	004120019	S	2684	GTGGATCCACAGTGCCTTCAGGAGCTGTGAAGTTAACTGCCTCATGGGAG	15	-	95050514-95050534:95050535-95050563	15qE3-qF1	Mus musculus NEL-like 2 (chicken) (Nell2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	A330108N19Rik; mel91; R75516	A330108N19Rik; mel91; R75516
Mus musculus	RefSeq	ILMN_219122	ILMN_219122	NELL2	NM_016743.2	NM_016743.2		54003	133922560	NM_016743.2	Nell2	NP_058023.2	ILMN_2704570	003400674	S	1846	CTGTAGAAACGGAGGAGCGTGCATTGCTGCCAATGTGTGTGCCTGCCCAC	15	-	95126619-95126668	15qE3-qF1	Mus musculus NEL-like 2 (chicken) (Nell2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	A330108N19Rik; mel91; R75516	A330108N19Rik; mel91; R75516
Mus musculus	RefSeq	ILMN_219122	ILMN_219122	NELL2	NM_016743.2	NM_016743.2		54003	133922560	NM_016743.2	Nell2	NP_058023.2	ILMN_2711366	003360554	S	2830	GCAGCTGGATAGACTGATGTCGATTATGGATTCGTGGGGCCTGAGGAACA	15	-	95050368-95050417	15qE3-qF1	Mus musculus NEL-like 2 (chicken) (Nell2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	A330108N19Rik; mel91; R75516	A330108N19Rik; mel91; R75516
Mus musculus	RefSeq	ILMN_198180	ILMN_198180	LOC210143	XM_140032.2	XM_140032.2			38082550	XM_140032.2	LOC210143		ILMN_2530757	002100754	S	1005	CGGCGACATTGAGGAGCTTGAGAGCATTAGGAAGGAACTGGAAGCCCGTG										
Mus musculus	RefSeq	ILMN_192516	ILMN_254640	PTCHD3	XM_109751.6	XM_109751.6		74675	149262582	XM_109751.6	Ptchd3	XP_109751.5	ILMN_1226854	001660204	S	2388	CCAGTGTGTTCCCTGTGGGTCACTTTTGCTATTGCTTCTGTGATTGTGGG	11	+	121703931-121703980	11qE2	PREDICTED: Mus musculus patched domain containing 3 (Ptchd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219947	ILMN_219947	GPX3	NM_008161.2	NM_008161.2		14778	145275177	NM_008161.2	Gpx3	NP_032187.2	ILMN_2715546	007320053	S	1275	GTGGGCGGGCCTCCCCTGAGCCCGTCTGTGGTGCCAGCCCTTAGTGCATT				11qB1.3	Mus musculus glutathione peroxidase 3 (Gpx3), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IDA]	GSHPx-P; AA960521; GSHPx-3; GPx	GSHPx-P; AA960521; GSHPx-3; GPx
Mus musculus	RefSeq	ILMN_242141	ILMN_242141	CYP2U1	NM_027816.1	NM_027816.1		71519	110625844	NM_027816.1	Cyp2u1	NP_082092.1	ILMN_3004221	004220132	S	1199	GGTGGTGCCGCTCGCCATTCCTCACATGACCTCGGAGAAAACAGCCTGAT				3qG3	Mus musculus cytochrome P450, family 2, subfamily u, polypeptide 1 (Cyp2u1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	8430436A10Rik	8430436A10Rik
Mus musculus	RefSeq	ILMN_198302	ILMN_198302	LOC232585	XM_145186.3	XM_145186.3			38083735	XM_145186.3	LOC232585		ILMN_2531201	001240047	S	3577	GGCCTGTGCATGAGAAATAACGTATGCAGTTGTCCTGGCGGATACACCGG										
Mus musculus	RefSeq	ILMN_258975	ILMN_258975	GM1943	NR_002928.1	NR_002928.1		384864	89886348	NR_002928.1	Gm1943		ILMN_2924969	006760754	S	179	AAACTCGAAGGACAGCGGTGGAAAGAAGCCGGAAAACACTGGCGGAACCA	8	-	111864580-111864629	8qD3	Mus musculus gene model 1943, (NCBI) (Gm1943), non-coding RNA.					
Mus musculus	RefSeq	ILMN_210632	ILMN_210632	AGXT2L2	NM_028398.2	NM_028398.2		72947	146260274	NM_028398.2	Agxt2l2	NP_082674.1	ILMN_1228943	002350475	S	1271	GGCCCTGGAAAGAATATTCTGAAGTTCAAGCCCCCAATGTGCTTCAACGT				11qB1.3	Mus musculus alanine-glyoxylate aminotransferase 2-like 2 (Agxt2l2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2900006B13Rik; RP23-79E13.3	2900006B13Rik; RP23-79E13.3
Mus musculus	RefSeq	ILMN_210632	ILMN_210632	AGXT2L2	NM_028398.2	NM_028398.2		72947	146260274	NM_028398.2	Agxt2l2	NP_082674.1	ILMN_2679447	007560221	S	1555	CCCAGTCAGACTTTTATGCCTGAAAACTTTGAGGATGGTGTACATGCTTC				11qB1.3	Mus musculus alanine-glyoxylate aminotransferase 2-like 2 (Agxt2l2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2900006B13Rik; RP23-79E13.3	2900006B13Rik; RP23-79E13.3
Mus musculus	RefSeq	ILMN_210632	ILMN_210632	AGXT2L2	NM_028398.2	NM_028398.2		72947	146260274	NM_028398.2	Agxt2l2	NP_082674.1	ILMN_1220417	000360343	S	779	GCCGGAGGGCTCTTTGTGGCAGATGAGATCCAGGTTGGTTTTGGCCGCAT				11qB1.3	Mus musculus alanine-glyoxylate aminotransferase 2-like 2 (Agxt2l2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2900006B13Rik; RP23-79E13.3	2900006B13Rik; RP23-79E13.3
Mus musculus	RefSeq	ILMN_210067	ILMN_210067	SNRK	NM_133741.1	NM_133741.1		20623	19526941	NM_133741.1	Snrk	NP_598502.1	ILMN_2835287	005890564	S	4582	GTCAGATGCCTCTAGTTCTGACCAGTCTTTTTCCTTGTGTGAACATTGAC	9	+	122078708-122078757	9qF4	Mus musculus SNF related kinase (Snrk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	R74830; MGC28970; E030034B15; mKIAA0096; 2010012F07Rik; AI448042; AW547029	R74830; MGC28970; E030034B15; mKIAA0096; 2010012F07Rik; AI448042; AW547029
Mus musculus	RefSeq	ILMN_210067	ILMN_210067	SNRK	NM_133741.1	NM_133741.1		20623	19526941	NM_133741.1	Snrk	NP_598502.1	ILMN_1259356	003610537	S	1556	AAGCCATCGGTCACCAATCGCCTGACGTCTCGCAAGAGTGCCCCAGTGCT	9	+	122075682-122075731	9qF4	Mus musculus SNF related kinase (Snrk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	R74830; MGC28970; E030034B15; mKIAA0096; 2010012F07Rik; AI448042; AW547029	R74830; MGC28970; E030034B15; mKIAA0096; 2010012F07Rik; AI448042; AW547029
Mus musculus	RefSeq	ILMN_210067	ILMN_210067	SNRK	NM_133741.1	NM_133741.1		20623	19526941	NM_133741.1	Snrk	NP_598502.1	ILMN_2758920	003190131	S	4453	TTCTGGAATTCTATCTGTATTTAAAGATGTGACAATCTTGACACCAATTT	9	+	122078579-122078628	9qF4	Mus musculus SNF related kinase (Snrk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	R74830; MGC28970; E030034B15; mKIAA0096; 2010012F07Rik; AI448042; AW547029	R74830; MGC28970; E030034B15; mKIAA0096; 2010012F07Rik; AI448042; AW547029
Mus musculus	RefSeq	ILMN_210067	ILMN_210067	SNRK	NM_133741.1	NM_133741.1		20623	19526941	NM_133741.1	Snrk	NP_598502.1	ILMN_2604894	003360601	S	1169	CAAGAGAAAGAAATACAGACCAGGTCTGCTAGCCCCAGCAACATCAAGGC	9	+	122073111-122073160	9qF4	Mus musculus SNF related kinase (Snrk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	R74830; MGC28970; E030034B15; mKIAA0096; 2010012F07Rik; AI448042; AW547029	R74830; MGC28970; E030034B15; mKIAA0096; 2010012F07Rik; AI448042; AW547029
Mus musculus	RefSeq	ILMN_217856	ILMN_251204	DEFB29	NM_001001444.2	NM_001001444.2		75400	142367292	NM_001001444.2	Defb29	NP_001001444.1	ILMN_2688452	001770463	S	9	CGCAGCCCTCTGTGCGCCTCAGCATGCCAGTCACAAAGTCATACTTCATG	2	-	152365719-152365746:152365747-152365768	2qH1	Mus musculus defensin beta 29 (Defb29), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		0610030I09Rik	0610030I09Rik
Mus musculus	RefSeq	ILMN_214572	ILMN_214572	HTR2A	NM_172812.2	NM_172812.2		15558	145301568	NM_172812.2	Htr2a	NP_766400.1	ILMN_2649399	002230541	S	2583	GAGGCTCAGATCAAATTAGACTACTCCAGTGGACCAACTATAATGTCCGG				14qD3	Mus musculus 5-hydroxytryptamine (serotonin) receptor 2A (Htr2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 51378] [evidence ISO]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISO]	MGC124302; Htr-2; E030013E04; Htr2; MGC124301	MGC124302; Htr-2; E030013E04; Htr2; MGC124301
Mus musculus	RefSeq	ILMN_214572	ILMN_214572	HTR2A	NM_172812.2	NM_172812.2		15558	145301568	NM_172812.2	Htr2a	NP_766400.1	ILMN_2725523	006100349	S	1610	CGCTACGTGGCTATCCAGAACCCCATTCACCATAGCCGCTTCAACTCCAG				14qD3	Mus musculus 5-hydroxytryptamine (serotonin) receptor 2A (Htr2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 51378] [evidence ISO]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISO]	MGC124302; Htr-2; E030013E04; Htr2; MGC124301	MGC124302; Htr-2; E030013E04; Htr2; MGC124301
Mus musculus	RefSeq	ILMN_198851	ILMN_235096	EG546036	XM_898878.2	XM_898878.2		546036	94383044	XM_898878.2	EG546036	XP_903971.2	ILMN_1220291	007610367	S	330	GTGTGCTGGACTTGGTCACGGAGAGCACGCTCATCTTATGGCTTGGTGTG	8	+	14002969-14003013:14003278-14003282	8qA1.1	PREDICTED: Mus musculus predicted gene, EG546036 (EG546036), mRNA.					
Mus musculus	MEEBO	ILMN_215132	ILMN_215132	1110002L01RIK	scl068571.4_91				51766772	XM_484105	1110002L01Rik		ILMN_2708320	005720674	S	136	GGCTCTGGAAACTTAAAGAGCCCGACGATCAAGTGATCTTGCCAACTACC										
Mus musculus	MEEBO	ILMN_215132	ILMN_215132	1110002L01RIK	scl068571.4_91				51766772	XM_484105	1110002L01Rik		ILMN_2708324	003850482	S	135	TGGCTCTGGAAACTTAAAGAGCCCGACGATCAAGTGATCTTGCCAACTAC										
Mus musculus	RefSeq	ILMN_215934	ILMN_215934	CORO1C	NM_011779.3	NM_011779.3		23790	142365603	NM_011779.3	Coro1c	NP_035909.2	ILMN_2665387	003370195	S	3363	CCCACTCTTATAGAGTGGCCATAGTGTTCTGTCAAAACACTCGCTTCCGT	5	-	114292471-114292520	5qF	Mus musculus coronin, actin binding protein 1C (Coro1c), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence TAS]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]; Assembly of an actin cortical patch, a discrete actin-containing structure found at the plasma membrane of fungal cells [goid 147] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AL022675; AW548837; AW455561; MGC102522	AL022675; AW548837; AW455561; MGC102522
Mus musculus	MEEBO	ILMN_188891	ILMN_188891	C230075M21RIK	scl51789.1.1477_48						C230075M21Rik		ILMN_1215649	000520372	S	6	GTCTTCCCTCTTCAAACTTCTCTTAGGTCCTCACCCCATCTCTACCAACC										
Mus musculus	RefSeq	ILMN_214660	ILMN_214660	TMEM178	NM_026516.2	NM_026516.2		68027	124517675	NM_026516.2	Tmem178	NP_080792.2	ILMN_2650475	004590301	S	1528	CGCTCTGTCTTTGTCCTGGAGTTCAAACGCGTAAGAAAAACAGACCAACC	17	+	81400988-81401037	17qE3	Mus musculus transmembrane protein 178 (Tmem178), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2810417M05Rik	2810417M05Rik
Mus musculus	RefSeq	ILMN_209639	ILMN_250023	ACSL3	NM_028817.2	NM_028817.2		74205	75992919	NM_028817.2	Acsl3	NP_083093.2	ILMN_1259366	003940253	S	3045	AAGTCATTGTTGAACAAAAGATTTGTTGCTGTGTAATTATTGTCTTGTAT	1	+	78703462-78703511	1qC4	Mus musculus acyl-CoA synthetase long-chain family member 3 (Acsl3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]	PRO2194; 2610510B12Rik; ACS3; Facl3; C85929	PRO2194; 2610510B12Rik; ACS3; Facl3; C85929
Mus musculus	RefSeq	ILMN_250023	ILMN_250023	ACSL3	NM_028817.2	NM_028817.2		74205	75992919	NM_028817.2	Acsl3	NP_083093.2	ILMN_3138743	005560615	A	2642	GGGCCGAGGCAAACTCCATTCCTCATATTAAATCCCGGCTGTTACTTCTC	1	+	78703059-78703108	1qC4	Mus musculus acyl-CoA synthetase long-chain family member 3 (Acsl3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]	PRO2194; 2610510B12Rik; ACS3; Facl3; C85929	PRO2194; 2610510B12Rik; ACS3; Facl3; C85929
Mus musculus	RefSeq	ILMN_250023	ILMN_250023	ACSL3	NM_028817.2	NM_028817.2		74205	75992919	NM_028817.2	Acsl3	NP_083093.2	ILMN_3061300	004060326	I	234	CTTACTGTTTACTCCTTGAACTTGCTGTGAGGCTCAGGTTGGCCTTGAAC	1	+	78659719-78659768	1qC4	Mus musculus acyl-CoA synthetase long-chain family member 3 (Acsl3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]	PRO2194; 2610510B12Rik; ACS3; Facl3; C85929	PRO2194; 2610510B12Rik; ACS3; Facl3; C85929
Mus musculus	Riken	ILMN_205899	ILMN_205899	A730094G13RIK	ri|A730094G13|PX00153I21|AK043418|3062					AK043418	A730094G13Rik		ILMN_2576044	003120242	S	2993	CACTTGTTTATGTGATCTGGGCCTATGCCAGATTATTTGTGACAGGAGCG										
Mus musculus	RefSeq	ILMN_220548	ILMN_220548	BC066107	NM_207245.1	NM_207245.1		240066	46402246	NM_207245.1	BC066107	NP_997128.1	ILMN_2903889	002810390	S	5102	GCAGCATGGATGGCAAACGTGGTTCTATTGGAAGCCTCTGGGAGCACTGC	17	-	33016234-33016283	17qB1	Mus musculus cDNA sequence BC066107 (BC066107), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC86136; AI173952	MGC86136; AI173952
Mus musculus	Riken	ILMN_206739	ILMN_206739	D230037A01RIK	ri|D230037A01|PX00189E16|AK084397|3151					AK084397	D230037A01Rik		ILMN_1259569	002260364	S	2783	CTGGAGCACCGACCAACTGGAAAGAGATGGTGCAAATGCGGGTGATGTCC										
Mus musculus	RefSeq	ILMN_185934	ILMN_185934	XBP1	NM_013842.2	NM_013842.2		22433	13775155	NM_013842.2	Xbp1	NP_038870.2	ILMN_2431237	003450100	S	1625	CTGCTTCCCAGGTTTCGTAACCTGAGGGGGCTTGTTTTCCCTTATGTGCA	11	+	5425700-5425749	11qA1	Mus musculus X-box binding protein 1 (Xbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	TREB5; XBP-1; TREB-5; D11Ertd39e	TREB5; XBP-1; TREB-5; D11Ertd39e
Mus musculus	MEEBO	ILMN_224259	ILMN_224259	FHOD1	scl34405.19.1_52				31343258	NM_177699	Fhod1		ILMN_2777491	004280114	S	3680	ACCACGCCTGGACATGACAGCGACATGCACAAGAGATGGAGTGCGGAAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	Riken	ILMN_204403	ILMN_204403	A130082N24RIK	ri|A130082N24|PX00125H10|AK038156|1693					AK038156	A130082N24Rik		ILMN_1254869	003520767	S	1367	AGCTCACGGAAATGCTGGGAACTAACTGTGAGGGTGGTGGCTGTGGCTTG										
Mus musculus	RefSeq	ILMN_222253	ILMN_222253	CHERP	NM_138585.3	NM_138585.3		27967	119672911	NM_138585.3	Cherp	NP_613051.3	ILMN_2746924	003890373	S	3405	GAGCTCCTCCATCTAGTGCAGCATCTTAGCTTGGGGCTTCTATCTGGAGA	8	-	74984727-74984776	8qB3.3	Mus musculus calcium homeostasis endoplasmic reticulum protein (Cherp), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISO]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence ISO]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	5730408I11Rik; Scaf6; DAN16; D8Wsu96e	5730408I11Rik; Scaf6; DAN16; D8Wsu96e
Mus musculus	RefSeq	ILMN_212898	ILMN_212898	SHOC2	NM_019658.5	NM_019658.5		56392	142372584	NM_019658.5	Shoc2	NP_062632.2	ILMN_2631446	000130161	S	1983	GCAAGCTGTCAATCATGAGTATTGAGAACTGTCCACTCAGTCACCTCCCA	19	+	54105639-54105688	19qD2	Mus musculus soc-2 (suppressor of clear) homolog (C. elegans) (Shoc2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC102442; Sur8; AU017287; mKIAA0862; Sur-8	MGC102442; Sur8; AU017287; mKIAA0862; Sur-8
Mus musculus	RefSeq	ILMN_218245	ILMN_218245	KCTD7	NM_172509.3	NM_172509.3		212919	146149109	NM_172509.3	Kctd7	NP_766097.1	ILMN_2693509	002690458	S	4154	GCAAGCGCAGGAGATGGGGTATGGGGAGTTTATTGGTGTGTGATCCCAGA				5qG1.3	Mus musculus potassium channel tetramerisation domain containing 7 (Kctd7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	4932409E18; 9430010P06Rik	4932409E18; 9430010P06Rik
Mus musculus	Riken	ILMN_206853	ILMN_206853	D430023I21RIK	ri|D430023I21|PX00194O06|AK085008|1658					AK085008	D430023I21Rik		ILMN_2583163	004590047	S	1410	CCATCAAGGCCATGTCTCCTAACCTGCCCCAGTATCACCACACTGAGGAC										
Mus musculus	MEEBO	ILMN_214151	ILMN_214151	IRF6	scl000851.1_458	NM_178083.2			31342565	NM_178083.2	Irf6		ILMN_2644836	001110537	S	1293	AACTCTTTTCCCCCGTCACCTTTTCACACTCTACATGATGAGACATGAAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IGI]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198481	ILMN_230820	EG626549	XM_911745.1	XM_911745.1		626549	82999006	XM_911745.1	EG626549	XP_916838.1	ILMN_1257614	004670195	S	590	CGCCATGTGGATCTGACCGTATAGAGTTGCTAGCTTACCTGCTGGGATAC				19qB	PREDICTED: Mus musculus predicted gene, EG626549 (EG626549), mRNA.					
Mus musculus	RefSeq	ILMN_213046	ILMN_213046	B3GALT4	NM_019420.1	NM_019420.1		54218	9506416	NM_019420.1	B3galt4	NP_062293.1	ILMN_3142602	006330491	A	1228	AAGCTGGTGAGCGGCATGAATGGGGAGAGGACTGCACCCTTTTGCTCCTG	17	-	34087373-34087422	17qB1	Mus musculus UDP-Gal:betaGalNAc beta 1,3-galactosyltransferase, polypeptide 4 (B3galt4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-1,4-beta-D-glucosyl-N-acylsphingosine = UDP + D-galactosyl-1,3-beta-N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine [goid 47915] [evidence IEA]	Gal-T2	Gal-T2
Mus musculus	RefSeq	ILMN_213046	ILMN_213046	B3GALT4	NM_019420.1	NM_019420.1		54218	9506416	NM_019420.1	B3galt4	NP_062293.1	ILMN_2632971	003870202	S	1397	CCTGTGGTGATCTAGTTCCTCCATTTTCTCACAGCAAACTCTGAAGCTGC	17	-	34087204-34087253	17qB1	Mus musculus UDP-Gal:betaGalNAc beta 1,3-galactosyltransferase, polypeptide 4 (B3galt4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-1,4-beta-D-glucosyl-N-acylsphingosine = UDP + D-galactosyl-1,3-beta-N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine [goid 47915] [evidence IEA]	Gal-T2	Gal-T2
Mus musculus	MEEBO	ILMN_212733	ILMN_212733	IPO8	scl00320727.1_7	XM_132974.3			28527414	XM_132974.3	Ipo8		ILMN_2629690	006180093	S	4959	CCTGTATTTTGCCATCTCTCATTTTTCAGGGCACCAAAGCTGCATGCCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence ISA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence ISA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_202322	ILMN_202322	4930438B07RIK	ri|4930438B07|PX00031G16|AK015333|1718					AK015333	4930438B07Rik		ILMN_2548703	001980376	S	1498	TGGGGACACCAATGGATGCGCTTTAATTTCCACTGTAGTATTTTGCCCTC										
Mus musculus	RefSeq	ILMN_200033	ILMN_200033	LOC383150	XM_356898.1	XM_356898.1			38079945	XM_356898.1	LOC383150		ILMN_1255563	004180196	S	1066	CCCAGGGCAGCTCTCTTTCGGGCTTCACCCTTCCAACCTAACCAGTTTCA										
Mus musculus	MEEBO	ILMN_187743	ILMN_187743	V2R5	scl022311.2_53						V2r5		ILMN_2446746	004900402	S	11	CAATTTTATTCTTCGTTTTGCTTTCATGGATATTGCCCTCTGGTAACTTC										
Mus musculus	MEEBO	ILMN_221469	ILMN_221469	4933421H10RIK	scl068178.1_250	NM_026599.3			31541991	NM_026599.3	4933421H10Rik		ILMN_2736038	004120706	S	3001	TGGGTCTTTTAGTAGGGATTGGTTACTATGCGTTGTCATGGGGAAGAGAC										
Mus musculus	RefSeq	ILMN_211574	ILMN_211574	IPO13	NM_146152.2	NM_146152.2		230673	31559913	NM_146152.2	Ipo13	NP_666264.1	ILMN_2617265	002230747	S	3461	AAGGAATTTACACTGCTCTGCCGGGGGCTACATGGCACGGACTACACAGC	4	-	117392502-117392551	4qD2.1	Mus musculus importin 13 (Ipo13), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence ISO]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Ranbp13; Kap13; Imp13; MGC18698	Ranbp13; Kap13; Imp13; MGC18698
Mus musculus	Riken	ILMN_206832	ILMN_206832	DNMT3A	ri|D930016J01|PX00201O12|AK086254|4017					AK086254	Dnmt3a		ILMN_1256464	002490441	S	3868	ATGTGCTGCTCTGCGGTGTTGCATGGGTTTCTCCCGCTGCGAGTTCAAGG						A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IDA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IGI]; Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence TAS]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IGI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_243580	ILMN_243580	ABCA17	NM_001031621.1	NM_001031621.1		381072	83716005	NM_001031621.1	Abca17	NP_001026792.1	ILMN_3074230	002140239	I	1763	AAGACATGGTTCAAATTAGGAAGAGCCTGGGCTGGTGCCCACAGCATGAC	17	-	24444441-24444490	17qA3.3	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 17 (Abca17), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways involving neutral lipids, lipids only soluble in solvents of very low polarity [goid 6638] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_198126	ILMN_243580	ABCA17	NM_001031621.1	NM_001031621.1		381072	83716005	NM_001031621.1	Abca17	NP_001026792.1	ILMN_1220528	002450730	S	3439	CTGTGGTATAAGGAAGAGGCTTTTGCACACCACGAGAGCATCCCAGCGGT	17	-	24424835-24424884	17qA3.3	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 17 (Abca17), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways involving neutral lipids, lipids only soluble in solvents of very low polarity [goid 6638] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_243580	ILMN_243580	ABCA17	NM_001031621.1	NM_001031621.1		381072	83716005	NM_001031621.1	Abca17	NP_001026792.1	ILMN_3153157	001660736	A	5082	CCTGGCCAGCCCCTCACCACCCTCTAACTCTAGGCCTATCTCGAGTCCTC	17	-	24401294-24401343	17qA3.3	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 17 (Abca17), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways involving neutral lipids, lipids only soluble in solvents of very low polarity [goid 6638] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_209637	ILMN_209637	SMARCA1	NM_053123.3	NM_053123.3		93761	31340953	NM_053123.3	Smarca1	NP_444353.2	ILMN_1253650	003140689	S	3614	CTTGTGCTGAGGTTTTAGCTTTTCTATGTTTTCTATGCCGCTGCTTTGAA	X	-	45162905-45162954	XqA4	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 (Smarca1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors [goid 43044] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence TAS]; Interacting selectively with a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 31491] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Snf2l; 5730494M04Rik	Snf2l; 5730494M04Rik
Mus musculus	RefSeq	ILMN_211480	ILMN_211480	SLC9A3R2	NM_023449.2	NM_023449.2		65962	142357121	NM_023449.2	Slc9a3r2	NP_075938.1	ILMN_1218241	006520746	S	16	AAGAACTCTGACCACCTGCTGCCAGCGCTCCTAGCCCCTTCTCATGGCTC	17	-	24781837-24781844:24781845-24781886	17qA3.3	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 (Slc9a3r2), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	0610011L07Rik; NHERF-2; Sip-1; E3karp; 2010007A20Rik; 1200011K07Rik; Octs2; Tka-1	0610011L07Rik; NHERF-2; Sip-1; E3karp; 2010007A20Rik; 1200011K07Rik; Octs2; Tka-1
Mus musculus	RefSeq	ILMN_222612	ILMN_222612	ETF1	NM_144866.3	NM_144866.3		225363	124286825	NM_144866.3	Etf1	NP_659115.3	ILMN_2995755	003440167	S	3579	ACACACATAAGTGAGGGGTGAAACCGTAGCCTGCACTCCCTAGCCTCTGC	18	-	35062515-35062564	18qB1	Mus musculus eukaryotic translation termination factor 1 (Etf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code) [goid 6415] [evidence ISO]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Involved in catalyzing the release of a nascent polypeptide chain from a ribosome [goid 3747] [evidence ISO]; A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site [goid 16149] [evidence IEA]	ERF; TB3-1; MGC18745; ERF1; D6Ertd109e; SUP45L1; AI463371	ERF; TB3-1; MGC18745; ERF1; D6Ertd109e; SUP45L1; AI463371
Mus musculus	RefSeq	ILMN_211121	ILMN_211121	OLFR1364	NM_146540.1	NM_146540.1		258533	33238955	NM_146540.1	Olfr1364	NP_666751.1	ILMN_2612727	006330523	S	598	GCTGTGGAAAGCACTGTTTTCATTTTATCGGTGATAATCGTGCTGGTGCC	13	-	21665676-21665725	13qA3.1	Mus musculus olfactory receptor 1364 (Olfr1364), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RP23-298F22.8; MOR256-13; MGC157552	RP23-298F22.8; MOR256-13; MGC157552
Mus musculus	MEEBO	ILMN_195654	ILMN_195654	D15BWG0759E	scl052877.1_143						D15Bwg0759e		ILMN_2517483	007000687	S	19	GCACCGGTGAGGGGGCAGCAGCTGCTTGAAGCTGTGATGATAGGAAACCA										
Mus musculus	RefSeq	ILMN_216210	ILMN_216210	RBMY1A1	NM_011253.1	NM_011253.1		19657	6755297	NM_011253.1	Rbmy1a1	NP_035383.1	ILMN_2668493	001030725	S	1490	AGTTTTACTGCCTTACCCGAATACGGAAATACATTGTTTTGGGGGGAAGT	Y	+	2097546-2097595	YqA1	Mus musculus RNA binding motif protein, Y chromosome, family 1, member A1 (Rbmy1a1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	RBM; Rbm1	RBM; Rbm1
Mus musculus	RefSeq	ILMN_219973	ILMN_219973	FBXO32	NM_026346.1	NM_026346.1		67731	13385847	NM_026346.1	Fbxo32	NP_080622.1	ILMN_2873444	003190110	S	2304	AAACATTCTGCCAGCTGCTGTTTCCCCTCGGCAGGCCAATGAGCTGAGGC	15	-	58011998-58012047	15qD1	Mus musculus F-box protein 32 (Fbxo32), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	ATROGIN1; MAFbx; 4833442G10Rik; atrogin-1	ATROGIN1; MAFbx; 4833442G10Rik; atrogin-1
Mus musculus	RefSeq	ILMN_219973	ILMN_219973	FBXO32	NM_026346.1	NM_026346.1		67731	13385847	NM_026346.1	Fbxo32	NP_080622.1	ILMN_2752994	000580019	S	405	AAGGAGAATCTGTTCAGCAGCCTGAACTACGACGTCGCAGCCAAGAAGAG	15	-	58039547-58039596	15qD1	Mus musculus F-box protein 32 (Fbxo32), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	ATROGIN1; MAFbx; 4833442G10Rik; atrogin-1	ATROGIN1; MAFbx; 4833442G10Rik; atrogin-1
Mus musculus	RefSeq	ILMN_219973	ILMN_219973	FBXO32	NM_026346.1	NM_026346.1		67731	13385847	NM_026346.1	Fbxo32	NP_080622.1	ILMN_2715893	000510347	S	2053	CCTCTTCTCCTTTCATGTTGTCACTCCTGTAGGGAACCGGGAGGCCAGCT	15	-	58012249-58012298	15qD1	Mus musculus F-box protein 32 (Fbxo32), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	ATROGIN1; MAFbx; 4833442G10Rik; atrogin-1	ATROGIN1; MAFbx; 4833442G10Rik; atrogin-1
Mus musculus	RefSeq	ILMN_200092	ILMN_313275	LOC100041003	XR_032541.1	XR_032541.1		100041003	149254045	XR_032541.1	LOC100041003		ILMN_1244786	001170497	S	2460	AGTCTTCATGCCACGTGTCTCTAGGGCCCTATTCCTATGGAGTCCCAAAA	5	+	94428949-94428998	5qE3	PREDICTED: Mus musculus similar to D5Ertd577e protein (LOC100041003), misc RNA.					
Mus musculus	MEEBO	ILMN_189014	ILMN_189014	IGHV8S7_U23022_IG_HEAVY_VARIABLE_8S7_163	IGHV8S7_U23022_Ig_heavy_variable_8S7_163						IGHV8S7_U23022_Ig_heavy_variable_8S7_163		ILMN_2457614	003390743	S	20	TAACCCAGCCCTGAAGAGTCGGCTCACAATCTCCAAGGATACCTCCAACA										
Mus musculus	MEEBO	ILMN_212895	ILMN_212895	EMID1	scl40571.19_50	NM_080595.1			18079311	NM_080595.1	Emid1		ILMN_1260009	001500465	S	1126	AGGGGTTGCACCAACTACGCGAGGCTTTGAAGATTTTAGCTGAGAGGGTT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_190792	ILMN_190792	V2R1B	scl056552.6_38	NM_019917.1			9910305	NM_019917.1	V2r1b		ILMN_2473327	003710047	S	12	GGTCAAATCATTCTCTGGTGTAACGAGGGGTCCACCCTTGCTTTCTATTG										
Mus musculus	RefSeq	ILMN_222127	ILMN_226575	OLFR615	NM_147080.1	NM_147080.1		259084	22128808	NM_147080.1	Olfr615	NP_667291.1	ILMN_1231317	004260546	S	787	CATCGGATCAGCCGCAGAAGTTCTCCAATAGCACATGCAGTCCTGGGAAA	7	+	110709779-110709828	7qE3	Mus musculus olfactory receptor 615 (Olfr615), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR19-2	MOR19-2
Mus musculus	RefSeq	ILMN_221934	ILMN_228260	GOLGB1	XM_001001861.2	XM_001001861.2		224139	149267904	XM_001001861.2	Golgb1	XP_001001861.1	ILMN_2742305	005900364	S	11923	TGGTTATTCTGTCTCCAACGCCATTGTCACCCACCACTGGGCACAGGGCT				16qB3	PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 9 (Golgb1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]				
Mus musculus	RefSeq	ILMN_221934	ILMN_228260	GOLGB1	XM_001001861.2	XM_001001861.2		224139	149267904	XM_001001861.2	Golgb1	XP_001001861.1	ILMN_2751314	001440259	S	1497	GAGCCGATTATCGGGGTTAGCAAATAATGTTTTGCATGAATTATCAGGAG				16qB3	PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1, transcript variant 9 (Golgb1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]				
Mus musculus	RefSeq	ILMN_200283	ILMN_200283	LOC386131	XM_359084.1	XM_359084.1			38081214	XM_359084.1	LOC386131		ILMN_2538222	005270133	S	308	GTGACCTGCATGCAAGGAGCATACAGGCTGCAAACCCCTTCAGTTCCTTC										
Mus musculus	RefSeq	ILMN_210339	ILMN_210339	NPTX1	NM_008730.2	NM_008730.2		18164	119672925	NM_008730.2	Nptx1	NP_032756.1	ILMN_2604570	003830440	S	4492	CCCGACTTATTTTCTAAGACTGCAAAGATCACTTTGTCACCAGCCCTGGG	11	-	119400775-119400824	11qE2	Mus musculus neuronal pentraxin 1 (Nptx1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Np1; D11Bwg1004e	Np1; D11Bwg1004e
Mus musculus	MEEBO	ILMN_223614	ILMN_223614	A730013G04	scl40075.7.1_176				51828453	XM_488597	A730013G04		ILMN_1248690	004120088	S	2965	GGAGGAGGTTCTCAAGGAATGACAGACAGAGTAAGGTAAGGTTGAATTTA										
Mus musculus	RefSeq	ILMN_219181	ILMN_219181	HIPK2	NM_010433.1	NM_010433.1		15258	6754197	NM_010433.1	Hipk2	NP_034563.1	ILMN_2705324	004730577	S	3617	TATCCAGCCCAGTTTGCCCACCAGACCTATATCAGCGCCTCGCCAGCCTC	6	-	38648194-38648243	6qB1	Mus musculus homeodomain interacting protein kinase 2 (Hipk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system that can be controlled at will [goid 50882] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Stank; 1110014O20Rik; B230339E18Rik	Stank; 1110014O20Rik; B230339E18Rik
Mus musculus	RefSeq	ILMN_219461	ILMN_314205	LOC100047261	XR_033381.1	XR_033381.1		100047261	149268975	XR_033381.1	LOC100047261		ILMN_1256219	000130519	S	494	GAGGCGTGCCGGTGTAGACAATGACAACCTCCATTGTGCTTTAGAATAAT					PREDICTED: Mus musculus similar to spermidine/spermine N1-acetyltransferase (LOC100047261), misc RNA.					
Mus musculus	Riken	ILMN_206239	ILMN_206239	A330078B09RIK	ri|A330078B09|PX00133A04|AK079617|2466					AK079617	A330078B09Rik		ILMN_1221265	001450647	S	2013	GATCCCCCACCCGCTTTCTAAACAGGAGCCGGCGTGAATTTTGAGCAGTG										
Mus musculus	Riken	ILMN_202035	ILMN_202035	HBB-B1	ri|2500004H04|ZX00052F16|AK010873|627					AK010873	Hbb-b1		ILMN_1223244	003610392	S	203	CCTCTGCCTCTGCTATCATGGGTAATGCCAAAGTGAAGACCCATGGCAAG						An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IMP]		
Mus musculus	MEEBO	ILMN_213859	ILMN_213859	A430085C19	scl51790.1.313_9	NM_177830.2			31342904	NM_177830.2	A430085C19		ILMN_2641525	006840475	S	1169	GTCATCTGGGGTAGCTTAAAAATCCACGTCCCTCTACCGAAGCGTCCTGT										
Mus musculus	RefSeq	ILMN_197086	ILMN_197086	LOC227397	XM_136824.2	XM_136824.2			38073935	XM_136824.2	LOC227397		ILMN_2526859	003140270	S	1867	GGAGGATTTCAGGAGGGTCAGTTGCCCTGCATGTTACAGAGCCCCCAGGA										
Mus musculus	MEEBO	ILMN_219257	ILMN_219257	6430526O11RIK	scl0237898.1_282	XM_110937.4			38091532	XM_110937.4	6430526O11Rik		ILMN_2728255	000240575	S	4479	GGTCAGCTTGGAAACCATAGTGAAGAAGACAGCACTGATGACCAAAGAGA										
Mus musculus	RefSeq	ILMN_218920	ILMN_218920	AKR1B8	NM_008012.1	NM_008012.1		14187	6679790	NM_008012.1	Akr1b8	NP_032038.1	ILMN_1219188	007320685	S	994	ATATCCCTATGATGCAGAATACTGAAGCTGAGTCAGCCCACGAGGCTTCC	6	+	34318144-34318168:34318169-34318193	6qB1	Mus musculus aldo-keto reductase family 1, member B8 (Akr1b8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+ [goid 4032] [evidence IEA]	Fgrp; Fgfrp; FR-1	Fgrp; Fgfrp; FR-1
Mus musculus	RefSeq	ILMN_194894	ILMN_312438	CTLA2B	XM_001477566.1	XM_001477566.1		13025	149264174	XM_001477566.1	Ctla2b	XP_001477616.1	ILMN_1248811	002940138	S	605	GGCTTGACTGGTAACAATATCATAGTCTAGGAGTGAAGCAAGCACTCTGC					PREDICTED: Mus musculus cytotoxic T lymphocyte-associated protein 2 beta (Ctla2b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4869] [evidence TAS]		
Mus musculus	MEEBO	ILMN_221853	ILMN_221853	STAU2	scl000947.1_28				23507042	AF459099	Stau2		ILMN_2741249	000010092	S	189	CAGTGTGTCTGGTAAATGAGTTAGCCCGTTTCCATAGCATCCAACCCCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212411	ILMN_249385	RAB3IP	NM_001003950.2	NM_001003950.2		216363	117676376	NM_001003950.2	Rab3ip	NP_001003950.1	ILMN_2626114	001110035	S	2388	CAGCTCATCTCTCTTGCTTTGAAAGTAAATCGATGGAGCATTGCTGCCGG	10	-	116343092-116343141	10qD2	Mus musculus RAB3A interacting protein (Rab3ip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	MGC90794; Gtpat12; Rabin3; B230311A06	MGC90794; Gtpat12; Rabin3; B230311A06
Mus musculus	RefSeq	ILMN_251278	ILMN_251278	D11BWG0517E	NM_001039167.1	NM_001039167.1		52897	85677496	NM_001039167.1	D11Bwg0517e	NP_001034256.1	ILMN_3110132	005700669	A	4433	TGCAGCCGAGCCCCAGGCTTCCTTTCTTACCATTCTGTATGCTTCCACGG	11	-	118351136-118351185	11qE2	Mus musculus DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed (D11Bwg0517e), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_251278	ILMN_251278	D11BWG0517E	NM_001039167.1	NM_001039167.1		52897	85677496	NM_001039167.1	D11Bwg0517e	NP_001034256.1	ILMN_3036278	004760626	I	1344	CACTGGAGCAAACGCTTGTTAAAATGCCAGTCCCGTGGGCGGGGCTGGCA	11	-	118357793-118357842	11qE2	Mus musculus DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed (D11Bwg0517e), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199145	ILMN_199145	LOC380706	XM_354621.1	XM_354621.1			38091453	XM_354621.1	LOC380706		ILMN_2534207	001110445	S	747	CGGCCTATGACACTCTCCAGAACTGTTGTCAGTGCCGAATTTTACTTCCC										
Mus musculus	Riken	ILMN_203601	ILMN_203601	GUCY2E	ri|A930005H11|PX00065E06|AK044282|3213					AK044282	Gucy2e		ILMN_2558550	001580039	S	2622	GGAAGACAAAAGGGGACAGGCAGGGGTCCAGAGGACAGTCATATTGGGTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211554	ILMN_211554	HILS1	NM_018792.1	NM_018792.1		54388	9055231	NM_018792.1	Hils1	NP_061262.1	ILMN_1222347	000730747	S	678	AGCTTTTCAAAGGAGTCCGTAGGGTGGCCAAAGGCAACCGCCATTGCCAT	11	+	94829652-94829701	11qD	Mus musculus histone H1-like protein in spermatids 1 (Hils1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	TISP64	TISP64
Mus musculus	RefSeq	ILMN_185494	ILMN_238008	XRN2	NM_011917.2	NM_011917.2		24128	117606213	NM_011917.2	Xrn2	NP_036047.2	ILMN_1241030	005080431	S	2935	CCACATTCCTTTTACCAGTCTACATTTTTATGCTATTTGTGGAAAGGTTT	2	+	146903301-146903350	2qG2	Mus musculus 5'-3' exoribonuclease 2 (Xrn2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IGI]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence NAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence NAS]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 7885830] [evidence IEP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of an RNA molecule [goid 4534] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185494	ILMN_238008	XRN2	NM_011917.2	NM_011917.2		24128	117606213	NM_011917.2	Xrn2	NP_036047.2	ILMN_2499356	001090440	S	201	GAGTTTGATAATCTGTATTTGGATATGAATGGGATCATCCACCCCTGCAC	2	+	146850307-146850356	2qG2	Mus musculus 5'-3' exoribonuclease 2 (Xrn2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IGI]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence NAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence NAS]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 7885830] [evidence IEP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of an RNA molecule [goid 4534] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185494	ILMN_238008	XRN2	NM_011917.2	NM_011917.2		24128	117606213	NM_011917.2	Xrn2	NP_036047.2	ILMN_1239876	006220451	S	434	AGGAATGGAAGCAGCAGTTGAGAAGCAGCGAGTCAGAGAGGAAATACTTG	2	+	146850987-146851036	2qG2	Mus musculus 5'-3' exoribonuclease 2 (Xrn2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IGI]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence NAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence NAS]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 7885830] [evidence IEP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of an RNA molecule [goid 4534] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	Riken	ILMN_202711	ILMN_202711	0610007J10RIK	ri|0610007J10|R000001F05|AK018717|633					AK018717	0610007J10Rik		ILMN_1246069	006550717	S	1	GGCATCCTGGGTTGGCGTAGCCATGGCGTCTCGTGTCCTCTGCGCCTGTG										
Mus musculus	MEEBO	ILMN_193938	ILMN_193938	4732460I02RIK	scl54224.1_5						4732460I02Rik		ILMN_1216587	001340044	S	1	GCTACAGCCATGATATGGGACCTCATTGCAGGCTCATAAGCAATATAGTA										
Mus musculus	RefSeq	ILMN_213618	ILMN_213618	CCR6	NM_009835.3	NM_009835.3		12458	141803448	NM_009835.3	Ccr6	NP_033965.1	ILMN_2639012	004590639	S	1250	CTGTTTATGGTGTTCTGCTATCTGTTCATTATCAAGACCTTGGTGCAGGC	17	+	8449487-8449536	17qA1	Mus musculus chemokine (C-C motif) receptor 6 (Ccr6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4945] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cmkbr6	Cmkbr6
Mus musculus	RefSeq	ILMN_244381	ILMN_244381	SLC28A1	NM_001004184.2	NM_001004184.2		434203	142372035	NM_001004184.2	Slc28a1	NP_001004184.1	ILMN_3161390	002320554	S	2713	CTGACTCTGATGCCTGGACCCCCAAGGTGAAAGAGGGAAGCCATCTCTGC	7	+	88315169-88315218	7qD3	Mus musculus solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 (Slc28a1), mRNA.		The directed movement of pyrimidines, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, into, out of, within or between cells [goid 15855] [evidence ISO]	Catalysis of the transfer of pyrimidines, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, from one side of a membrane to the other [goid 5350] [evidence ISO]	MGC74379	MGC74379
Mus musculus	RefSeq	ILMN_200489	ILMN_200489	LOC381740	XM_355722.1	XM_355722.1			38082674	XM_355722.1	LOC381740		ILMN_1243994	007210474	S	402	CTACTCCCAAAATCCTTCTGGGAGAACAAGTGCAAGGTACATTGGGAATG										
Mus musculus	Riken	ILMN_205293	ILMN_205293	4833431P07RIK	ri|4833431P07|PX00313J03|AK029414|914					AK029414	4833431P07Rik		ILMN_2571469	001580376	S	502	GGCGCTGGCGCGCGCTTCCGGTACTTCTCTTTGTTCACTCACTTTAATGC										
Mus musculus	RefSeq	ILMN_184871	ILMN_310783	LOC100048123	XM_001479739.1	XM_001479739.1		100048123	149256989	XM_001479739.1	LOC100048123	XP_001479789.1	ILMN_1251040	000520538	S	4500	GTCCCAGTTGCTTCACAAGGCTGCATGGGCGTGTACCTTCCATCACTAAG					PREDICTED: Mus musculus similar to serine/threonine kinase, transcript variant 1 (LOC100048123), mRNA.					
Mus musculus	RefSeq	ILMN_185199	ILMN_185199	TYRP1	NM_031202.2	NM_031202.2		22178	50233911	NM_031202.2	Tyrp1	NP_112479.1	ILMN_1228521	001470133	S	2632	GTTGTATTTCATTTCAACAGCATTGTTACACCACTTATCAGCCTTCTGTG	4	+	80497534-80497583	4qC3	Mus musculus tyrosinase-related protein 1 (Tyrp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving acetoacetic acid, a beta-keto acid of the keto acid group, empirical formula is C4H6O3 or CH3COCH2COOH [goid 43438] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 6582] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IMP]; The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence TAS]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]	Tyrp; brown; TRP-1; b; isa; TRP1	Tyrp; brown; TRP-1; b; isa; TRP1
Mus musculus	RefSeq	ILMN_185199	ILMN_185199	TYRP1	NM_031202.2	NM_031202.2		22178	50233911	NM_031202.2	Tyrp1	NP_112479.1	ILMN_1244305	000110646	S	1559	CGCACCTATTGGACATAACAGGCAATACAACATGGTGCCATTCTGGCCTC	4	+	80495659-80495708	4qC3	Mus musculus tyrosinase-related protein 1 (Tyrp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving acetoacetic acid, a beta-keto acid of the keto acid group, empirical formula is C4H6O3 or CH3COCH2COOH [goid 43438] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 6582] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IMP]; The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence TAS]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]	Tyrp; brown; TRP-1; b; isa; TRP1	Tyrp; brown; TRP-1; b; isa; TRP1
Mus musculus	RefSeq	ILMN_185199	ILMN_185199	TYRP1	NM_031202.2	NM_031202.2		22178	50233911	NM_031202.2	Tyrp1	NP_112479.1	ILMN_2425003	002260215	S	1045	GCGATGTCTGCACTGATGACTTGATGGGATCCAGAAGCAACTTCGATTCT	4	+	80486568-80486617	4qC3	Mus musculus tyrosinase-related protein 1 (Tyrp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving acetoacetic acid, a beta-keto acid of the keto acid group, empirical formula is C4H6O3 or CH3COCH2COOH [goid 43438] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 6582] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IMP]; The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence TAS]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]	Tyrp; brown; TRP-1; b; isa; TRP1	Tyrp; brown; TRP-1; b; isa; TRP1
Mus musculus	RefSeq	ILMN_214903	ILMN_214903	HMBS	NM_013551.1	NM_013551.1		15288	30794511	NM_013551.1	Hmbs	NP_038579.1	ILMN_1250541	003390100	S	1473	CCACTAATAAACCAGTTTAGAATGTGGTTCTTCTGATAGAGTTGGGGAAG	9	-	44144451-44144500	9qA5.2	Mus musculus hydroxymethylbilane synthase (Hmbs), mRNA.		The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IEA]; The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next [goid 33014] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 4 porphobilinogen + H2O = hydroxymethylbilane + 4 NH3 [goid 4418] [evidence IEA]	T25658; Ups; Uros1; PBGD	T25658; Ups; Uros1; PBGD
Mus musculus	RefSeq	ILMN_208900	ILMN_208900	DAGLA	NM_198114.2	NM_198114.2		269060	154091035	NM_198114.2	Dagla	NP_932782.2	ILMN_1251657	000240402	S	3005	AACCTGGTACCCAAGCCCCCCAGGCTCTTTGCAGGATCTGCTGAACCCTC				19qA	Mus musculus diacylglycerol lipase, alpha (Dagla), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Nsddr; KIAA0659	Nsddr; KIAA0659
Mus musculus	RefSeq	ILMN_208900	ILMN_208900	DAGLA	NM_198114.2	NM_198114.2		269060	154091035	NM_198114.2	Dagla	NP_932782.2	ILMN_1246591	006020139	S	3145	TCTGGCCACAGACAAGATCCGGACTTCCACCCCCACAGGCCACGGGGCCA				19qA	Mus musculus diacylglycerol lipase, alpha (Dagla), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Nsddr; KIAA0659	Nsddr; KIAA0659
Mus musculus	RefSeq	ILMN_222502	ILMN_222502	MAMDC2	NM_174857.3	NM_174857.3		71738	146149246	NM_174857.3	Mamdc2	NP_777282.1	ILMN_2750558	002480315	S	2619	CAGTCACTTCAGAGTACACGTATAAAGGGCACAATCAGAGCGAGTGTGCT				19qB	Mus musculus MAM domain containing 2 (Mamdc2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1200015L10Rik; AI591564	1200015L10Rik; AI591564
Mus musculus	RefSeq	ILMN_197509	ILMN_197509	LOC270397	XM_193473.3	XM_193473.3			38076354	XM_193473.3	LOC270397		ILMN_1233482	000540682	S	795	GATCAAGGACAAGGATGCAGCTGGGACTGAGGGTGTGAAGAAGATGCAGG										
Mus musculus	RefSeq	ILMN_201492	ILMN_201492	LOC385254	XM_358151.1	XM_358151.1			38094638	XM_358151.1	LOC385254		ILMN_1230575	006420706	S	538	GTGAGCGTCTTTCATCGGGATTGTGCTTCAGGGGATCTCTTCCGCTCGGT										
Mus musculus	RefSeq	ILMN_189892	ILMN_241508	RN18S	NR_003278.1	NR_003278.1		19791	120444899	NR_003278.1	Rn18s		ILMN_2638923	002750066	S	533	CAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATCCTT					Mus musculus 18S RNA (Rn18s), non-coding RNA.					
Mus musculus	RefSeq	ILMN_192047	ILMN_241508	RN18S	NR_003278.1	NR_003278.1		19791	120444899	NR_003278.1	Rn18s		ILMN_1230073	003520240	S	321	GCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTC					Mus musculus 18S RNA (Rn18s), non-coding RNA.					
Mus musculus	RefSeq	ILMN_188212	ILMN_241508	RN18S	NR_003278.1	NR_003278.1		19791	120444899	NR_003278.1	Rn18s		ILMN_2450735	004040768	S	868	GGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGA					Mus musculus 18S RNA (Rn18s), non-coding RNA.					
Mus musculus	RefSeq	ILMN_211897	ILMN_211897	PI4KB	NM_175356.1	NM_175356.1		107650	29648331	NM_175356.1	Pi4kb	NP_780565.1	ILMN_2689259	002070408	S	3170	GGTTCTTGGTACTTAGGACTTAATCCTATGTTTGGCCATGCTGCTGCCTA	3	+	94810248-94810297	3qF2.1	Mus musculus phosphatidylinositol 4-kinase, catalytic, beta polypeptide (Pi4kb), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]	Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 4-phosphate [goid 4430] [evidence IEA]	ESTM41; AA437822; Pik4cb	ESTM41; AA437822; Pik4cb
Mus musculus	RefSeq	ILMN_211897	ILMN_211897	PI4KB	NM_175356.1	NM_175356.1		107650	29648331	NM_175356.1	Pi4kb	NP_780565.1	ILMN_2620539	006960692	S	864	CCGGCTCTTCTACTTTCGCAATGAGGATGTGGACTTCTATTTGCCCCAGT	3	+	94788418-94788467	3qF2.1	Mus musculus phosphatidylinositol 4-kinase, catalytic, beta polypeptide (Pi4kb), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]	Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 4-phosphate [goid 4430] [evidence IEA]	ESTM41; AA437822; Pik4cb	ESTM41; AA437822; Pik4cb
Mus musculus	RefSeq	ILMN_211897	ILMN_211897	PI4KB	NM_175356.1	NM_175356.1		107650	29648331	NM_175356.1	Pi4kb	NP_780565.1	ILMN_2942857	001090674	S	3037	GGACTCACTGCCCTCCAGAGAACAGAGGTGATGAACATGAGGAGGACTGG	3	+	94810115-94810164	3qF2.1	Mus musculus phosphatidylinositol 4-kinase, catalytic, beta polypeptide (Pi4kb), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]	Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 4-phosphate [goid 4430] [evidence IEA]	ESTM41; AA437822; Pik4cb	ESTM41; AA437822; Pik4cb
Mus musculus	RefSeq	ILMN_213007	ILMN_213007	IL28RA	NM_174851.2	NM_174851.2		242700	40254284	NM_174851.2	Il28ra	NP_777276.2	ILMN_2653328	004390543	S	3760	GTGTGGTGGGCAGCTTCGGCACACTGAGGCTATACGTCTTACGTGTTTGT	4	+	135263911-135263960	4qD3	Mus musculus interleukin 28 receptor alpha (Il28ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IFNLR1; CRF2-12	IFNLR1; CRF2-12
Mus musculus	RefSeq	ILMN_213007	ILMN_213007	IL28RA	NM_174851.2	NM_174851.2		242700	40254284	NM_174851.2	Il28ra	NP_777276.2	ILMN_2632571	005690452	S	1543	AGCAATGCCGGCTGTTGGGGCACTTCAAGCGTGCAGAGGACGGAGGTCAG	4	+	135261694-135261743	4qD3	Mus musculus interleukin 28 receptor alpha (Il28ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IFNLR1; CRF2-12	IFNLR1; CRF2-12
Mus musculus	RefSeq	ILMN_213007	ILMN_213007	IL28RA	NM_174851.2	NM_174851.2		242700	40254284	NM_174851.2	Il28ra	NP_777276.2	ILMN_3009880	004070044	S	3466	GTGATGACAGCATTGGCCTCGCCTTTCAAGCTTGCTCTCTCCGGTAGTCC	4	+	135263617-135263666	4qD3	Mus musculus interleukin 28 receptor alpha (Il28ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IFNLR1; CRF2-12	IFNLR1; CRF2-12
Mus musculus	Riken	ILMN_203102	ILMN_203102	4833401K19RIK	ri|4833401K19|PX00027B11|AK029350|1015					AK029350	4833401K19Rik		ILMN_1256028	000620671	S	696	TACGTCATTTCCTCTGCTATCCATCCCCACGCCGAGCACTGGACGATCTC										
Mus musculus	MEEBO	ILMN_193901	ILMN_193901	4933407H18RIK	scl27929.1_226				51710929	XM_132005	4933407H18Rik		ILMN_2758990	002360504	S	5157	GCCAGCACACACCTTAAACCAGAACCAGGAGCCAGCACACACCTTAAACC										
Mus musculus	RefSeq	ILMN_201280	ILMN_201280	LOC382362	XM_356462.1	XM_356462.1			38090455	XM_356462.1	LOC382362		ILMN_2541731	004670180	S	677	ACAAGGCGGTTAGGACCAGCATATACACAAAACATCTGGAGCGCTGGTTG										
Mus musculus	RefSeq	ILMN_223514	ILMN_310347	LOC100044708	XM_001472899.1	XM_001472899.1		100044708	149261237	XM_001472899.1	LOC100044708	XP_001472949.1	ILMN_1247770	000240274	S	600	TCCTAGCCGAAGCCGAGCGGGACTGGGTCGGGCTGCGCTGCGAGCAGCGG					PREDICTED: Mus musculus similar to transcription factor Math5 (LOC100044708), mRNA.					
Mus musculus	Riken	ILMN_206442	ILMN_206442	C230060D12RIK	ri|C230060D12|PX00175M10|AK082535|2915					AK082535	C230060D12Rik		ILMN_2580105	001570088	S	2262	CAACGGGCTAGTCCATGACCATCATAGAGGGTAGCATGGCACTGCAGCAG										
Mus musculus	RefSeq	ILMN_199436	ILMN_199436	MRGPRA7	NM_207535.1	NM_207535.1		404236	46430525	NM_207535.1	Mrgpra7	NP_997418.1	ILMN_2861051	004730187	S	762	CAGCTGTGCCAACCCCATCATTTACTTCTTCGTGGGATCATTCAGGCATC					Mus musculus MAS-related GPR, member A7 (Mrgpra7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgA7	MrgA7
Mus musculus	RefSeq	ILMN_199783	ILMN_199783	LOC383928	XM_357329.1	XM_357329.1			38077299	XM_357329.1	LOC383928		ILMN_1255042	004560427	S	560	GTGAGAGACGGGTTCTGCGTGTCACCCTAGCTTCAGAAAAACACCCCAAG										
Mus musculus	RefSeq	ILMN_220477	ILMN_220477	SLC13A3	NM_054055.2	NM_054055.2		114644	133892571	NM_054055.2	Slc13a3	NP_473396.1	ILMN_2722579	006980097	S	2720	ACGGGGGCAAAGTGTCTTAGGCCAGAAGTACGCTGTAGCATTGTAACATT	2	-	165231249-165231298	2qH3	Mus musculus solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 (Slc13a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 15362] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SDCT2; NaDC-3; NaDC3	SDCT2; NaDC-3; NaDC3
Mus musculus	RefSeq	ILMN_218748	ILMN_218748	FUNDC1	NM_028058.1	NM_028058.1		72018	21312525	NM_028058.1	Fundc1	NP_082334.1	ILMN_2958016	004280441	S	1513	CTTGATTATATGATGTAAGCACTAGGGCTCTCAGGCATTGCTAGCGTTCC	X	-	16713915-16713964	XqA1.2	Mus musculus FUN14 domain containing 1 (Fundc1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810033P05Rik; 1500005J14Rik	1810033P05Rik; 1500005J14Rik
Mus musculus	Riken	ILMN_202223	ILMN_202223	4833426H15RIK	ri|4833426H15|PX00028K19|AK014770|1046					AK014770	4833426H15Rik		ILMN_1254446	003830142	S	59	GCTCGCCTTGACTCCTCAGAAAGAAGTTCATGTCGCGGGGACCTAGCGGC										
Mus musculus	RefSeq	ILMN_211068	ILMN_211068	5430407P10RIK	NM_144883.2	NM_144883.2		227545	110625903	NM_144883.2	5430407P10Rik	NP_659132.2	ILMN_2872011	003930008	S	3973	TGCTATGCACTGAGACTGATCGTGGATTCCTCAGCCACGGGAGGGGACAC				2qA1	Mus musculus RIKEN cDNA 5430407P10 gene (5430407P10Rik), mRNA.				MGC36947; AU067770	MGC36947; AU067770
Mus musculus	RefSeq	ILMN_202031	ILMN_310603	EG434402	XM_001479948.1	XM_001479948.1		434402	149259956	XM_001479948.1	EG434402	XP_001479998.1	ILMN_2546510	007160086	S	513	GGGAACTGCTCTCGCAACCCGAATCTCAGCGTAGAACGAATGCCTCCCCT	9	+	48303993-48304026:48304027-48304042	9qA5.3	PREDICTED: Mus musculus predicted gene, EG434402 (EG434402), mRNA.					
Mus musculus	RefSeq	ILMN_244603	ILMN_244603	OTTMUSG00000007855	NM_001081019.1	NM_001081019.1		667250	124486605	NM_001081019.1	OTTMUSG00000007855	NP_001074488.1	ILMN_3123441	001710209	A	497	TTTTTTCCTCTTCTTCCTGTTATCAGTAGTTCTGAATGTTAGATATTTTT	4	+	94266529-94266578	4qC5	Mus musculus predicted gene, OTTMUSG00000007855 (OTTMUSG00000007855), mRNA.					
Mus musculus	Riken	ILMN_203592	ILMN_203592	6030495B01RIK	ri|6030495B01|PX00058H05|AK031708|2949					AK031708	6030495B01Rik		ILMN_1228778	002600438	S	2721	AATCACGGATGGGTTACCAGGCCCGGACGCTAGCCTGTCTTAAACCTCGG										
Mus musculus	MEEBO	ILMN_215805	ILMN_215805	1810012K16RIK	scl33999.2.1_35	XM_150054.1			20861332	XM_150054.1	1810012K16Rik		ILMN_2663788	005260102	S	303	TAAGCTGCCGCTGCAGGTTTTATAGTTCCCAGCGATATATTCCTGAGGCT										
Mus musculus	RefSeq	ILMN_217130	ILMN_217130	KPNA3	NM_008466.3	NM_008466.3		16648	88014722	NM_008466.3	Kpna3	NP_032492.1	ILMN_1247312	001940041	S	3993	GGCATCTAAACGTGTTCCTAATTTTGTATATGGGCTTAGGTTTTGTAACC	14	-	61984074-61984123	14qD1	Mus musculus karyopherin (importin) alpha 3 (Kpna3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	IPOA4	IPOA4
Mus musculus	RefSeq	ILMN_214450	ILMN_214450	PSD4	NM_177611.3	NM_177611.3		215632	46402517	NM_177611.3	Psd4	NP_808279.1	ILMN_2867382	001660424	S	4303	AAAGAGGTTGCTGGCCAAATGGAAGCCTCTGCTGCTCACCCTTCAGCTGG	2	+	24263869-24263918	2qA3	Mus musculus pleckstrin and Sec7 domain containing 4 (Psd4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	EFA6B; BC046518	EFA6B; BC046518
Mus musculus	RefSeq	ILMN_214450	ILMN_214450	PSD4	NM_177611.3	NM_177611.3		215632	46402517	NM_177611.3	Psd4	NP_808279.1	ILMN_1228690	002680301	S	3780	CCCGGGACAGGGAGTACATGAAAAGGCTGCGTGCCTAATTGTTGTTAATC	2	+	24263346-24263395	2qA3	Mus musculus pleckstrin and Sec7 domain containing 4 (Psd4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	EFA6B; BC046518	EFA6B; BC046518
Mus musculus	RefSeq	ILMN_199933	ILMN_199933	LOC381579	XM_355540.1	XM_355540.1			38079057	XM_355540.1	LOC381579		ILMN_1240044	006770674	S	91	GCAGCAAAAATGAAGACTCGGACCAGCAACATCATTGATGTGTCTGCCGC										
Mus musculus	RefSeq	ILMN_211531	ILMN_211531	LRRC23	NM_013588.1	NM_013588.1		16977	7305240	NM_013588.1	Lrrc23	NP_038616.1	ILMN_1228163	000670386	S	1356	GGTCGGGGGTAAAACTAGGATGCTAGTAGGTGTTGTCTATAGAGAGGCGC	6	-	124723167-124723216	6qF2	Mus musculus leucine rich repeat containing 23 (Lrrc23), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921537K05Rik; B7; Lrpb7	4921537K05Rik; B7; Lrpb7
Mus musculus	RefSeq	ILMN_211531	ILMN_211531	LRRC23	NM_013588.1	NM_013588.1		16977	7305240	NM_013588.1	Lrrc23	NP_038616.1	ILMN_1257820	004830059	S	1022	ATTCTATGAGGATGATGACCGGGCAGAGGCCGAGGAGATCCGTCAGAGGC	6	-	124724057-124724106	6qF2	Mus musculus leucine rich repeat containing 23 (Lrrc23), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921537K05Rik; B7; Lrpb7	4921537K05Rik; B7; Lrpb7
Mus musculus	Riken	ILMN_203331	ILMN_203331	4632404B13RIK	ri|4632404B13|PX00012K06|AK028495|2689					AK028495	4632404B13Rik		ILMN_1217530	002360086	S	2343	AACCCATCCAGTCATGGGCTTCTCTTTGTTGGTGGAGTTGTTGTGGCCGA										
Mus musculus	RefSeq	ILMN_210748	ILMN_210748	GPR142	NM_181749.1	NM_181749.1		217302	32306533	NM_181749.1	Gpr142	NP_861414.1	ILMN_1214518	003060619	S	849	CATGCTGTACCATCTGTATGTGGCCCCTGTTCACCGGGATTGGAGGGTCC	11	+	114667810-114667859	11qE2	Mus musculus G protein-coupled receptor 142 (Gpr142), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISA]	PGR2	PGR2
Mus musculus	RefSeq	ILMN_209291	ILMN_209291	NICN1	NM_025449.2	NM_025449.2		66257	31560258	NM_025449.2	Nicn1	NP_079725.1	ILMN_2821916	005490343	S	2035	ACAGCTGTGTTCCTAAGTTCCCAGAGCTGGAGCTAGTGTACGGCAAGATC	9	+	108154521-108154570	9qF2	Mus musculus nicolin 1 (Nicn1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1500032A17Rik	1500032A17Rik
Mus musculus	RefSeq	ILMN_257570	ILMN_257570	HIST4H4	NM_175652.1	NM_175652.1		320332	28316745	NM_175652.1	Hist4h4	NP_783583.1	ILMN_2985128	006400682	S	68	TCCGCGACAACATCCAGGGCATTACCAAGCCCGCTATCCGGCGGTTGGCT	6	-	136752783-136752832	6qG1	Mus musculus histone cluster 4, H4 (Hist4h4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	B130044J01Rik	B130044J01Rik
Mus musculus	RefSeq	ILMN_257570	ILMN_257570	HIST4H4	NM_175652.1	NM_175652.1		320332	28316745	NM_175652.1	Hist4h4	NP_783583.1	ILMN_2985127	001440474	S	1	ATGTCAGGACGAGGAAAAGGCGGCAAGGGTCTGGGGAAAGGTGGCGCCAA	6	-	136752850-136752899	6qG1	Mus musculus histone cluster 4, H4 (Hist4h4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	B130044J01Rik	B130044J01Rik
Mus musculus	Riken	ILMN_204276	ILMN_204276	9530097A09RIK	ri|9530097A09|PX00115I17|AK035731|1664					AK035731	9530097A09Rik		ILMN_1248066	000830053	S	1132	GCAAGTTCCAGGCCACTGAACGAAGAGAAAAACGAAGAGGGAGACAAGCC										
Mus musculus	Riken	ILMN_204197	ILMN_204197	C730031B13RIK	ri|C730031B13|PX00087M22|AK050252|2524					AK050252	C730031B13Rik		ILMN_2563120	002450056	S	2343	CTTGAGCAGCCCCAAGGTATCACTCCTGGAAAAGCAAGCTGACACTACAG										
Mus musculus	RefSeq	ILMN_213722	ILMN_213722	AOX3	NM_023617.2	NM_023617.2		71724	114205419	NM_023617.2	Aox3	NP_076106.2	ILMN_2640097	003190646	S	4096	AAATGCTGTAAGCCGTGGTCCATCCCAGTTGCCTAGTGCTTGGGGTTCCA	1	+	58257032-58257067:58257068-58257081	1qC1.3	Mus musculus aldehyde oxidase 3 (Aox3), mRNA.			Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence ISA]; Interacting selectively with molybdenum (Mo) ions [goid 30151] [evidence IDA]; Catalysis of the reaction: an aldehyde + H2O + O2 = a carboxylic acid + H2O2 [goid 4031] [evidence IDA]	Aoh2; Aoh1; 1200011D03Rik; AI326299	Aoh2; Aoh1; 1200011D03Rik; AI326299
Mus musculus	Riken	ILMN_205332	ILMN_205332	A330058M23RIK	ri|A330058M23|PX00132N09|AK039547|2554					AK039547	A330058M23Rik		ILMN_2571749	003420390	S	2141	AGTGCTCTTGCCTTGGTTGGAGGCAGGGTGCAGAGACCATGAGGAGCAGA										
Mus musculus	RefSeq	ILMN_214142	ILMN_214142	LSG1	NM_178069.5	NM_178069.5		224092	153792054	NM_178069.5	Lsg1	NP_835170.1	ILMN_1248340	007000050	S	163	GTGAACTCAATGATGGCTATGACTGGGGTCGTCTGAATCTTCAGTCTGTG				16qB2	Mus musculus large subunit GTPase 1 homolog (S. cerevisiae) (Lsg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	5830465I20; D16Bwg1547e; AA409273	5830465I20; D16Bwg1547e; AA409273
Mus musculus	RefSeq	ILMN_214142	ILMN_214142	LSG1	NM_178069.5	NM_178069.5		224092	153792054	NM_178069.5	Lsg1	NP_835170.1	ILMN_1239569	001510286	S	1865	GCATGGCCTGGTGACTGCGGCTGCTGCGAGCGCTGAGAATGTACCTGGGA				16qB2	Mus musculus large subunit GTPase 1 homolog (S. cerevisiae) (Lsg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	5830465I20; D16Bwg1547e; AA409273	5830465I20; D16Bwg1547e; AA409273
Mus musculus	RefSeq	ILMN_207533	ILMN_207533	4921525L17RIK	XM_284079.2	XM_284079.2			38081755	XM_284079.2	4921525L17Rik		ILMN_1260462	006550328	I	3396	ACGTCATTTCAAGGGCACACGGGGACGGAACCTTGGGGAACTCATTTCTG										
Mus musculus	MEEBO	ILMN_195874	ILMN_195874	CREM	scl0002242.1_3				7304976	NM_013498	Crem		ILMN_2602899	003840112	S	2068	TGGAGAGTTTCTGCTGATGACCCTCCATTGTGAATTCTTGCAACCTCAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195874	ILMN_195874	CREM	scl0002242.1_3				7304976	NM_013498	Crem		ILMN_1244890	005290041	S	1	AAATAAGGAAAACAGGGAAGGAACAAAGCATTGATTACACATGTAATAAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197344	ILMN_197344	LOC381404	XM_355363.1	XM_355363.1			38075239	XM_355363.1	LOC381404		ILMN_2527800	001240239	S	1592	TGGCCACACAGCAAAGACCAAGGGCTGTCCTAGAGAAGATAGGGCAGCTG										
Mus musculus	RefSeq	ILMN_220057	ILMN_311507	LOC100046891	XR_033104.1	XR_033104.1		100046891	149264159	XR_033104.1	LOC100046891		ILMN_1237371	007510750	S	6238	GCTGCTTACGGCATAGGAAAGTACACTAGCAGCGTGCTTCAATTCTGCCA					PREDICTED: Mus musculus similar to Smad5 (LOC100046891), misc RNA.					
Mus musculus	RefSeq	ILMN_220984	ILMN_220984	HBB-B2	NM_016956.2	NM_016956.2		15130	31980675	NM_016956.2	Hbb-b2	NP_058652.1	ILMN_2729513	000580402	S	517	TCCCCTAGAGAAAAACTGTCAAGTGTGGGGAAATGATGAAGACCTTTGGG	7	-	110962381-110962430		Mus musculus hemoglobin, beta adult minor chain (Hbb-b2), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IEA]	The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	AI036344	AI036344
Mus musculus	RefSeq	ILMN_244634	ILMN_244634	0610010E21RIK	NM_001033140.3	NM_001033140.3		68332	111118962	NM_001033140.3	0610010E21Rik	NP_001028312.2	ILMN_2891688	003390088	S	773	CCCTGATGAACCGTGAGAAACTTGGCAGTCTGACTCGTTGTGAAGAACCG	7	-	31106572-31106621	7qB1	Mus musculus RIKEN cDNA 0610010E21 gene (0610010E21Rik), mRNA.				AW490662; AI430885	AW490662; AI430885
Mus musculus	RefSeq	ILMN_192019	ILMN_244634	0610010E21RIK	NM_001033140.3	NM_001033140.3		68332	111118962	NM_001033140.3	0610010E21Rik	NP_001028312.2	ILMN_2484274	007160209	S	808	CGTTGTGAAGAACCGGGTTCATGAGGGAGATTACACTAGCTCATCTCAGC	7	-	31106537-31106586	7qB1	Mus musculus RIKEN cDNA 0610010E21 gene (0610010E21Rik), mRNA.				AW490662; AI430885	AW490662; AI430885
Mus musculus	RefSeq	ILMN_198174	ILMN_318202	GM88	XM_001478757.1	XM_001478757.1		224813	149269358	XM_001478757.1	Gm88	XP_001478807.1	ILMN_1254178	004810019	S	1228	CTCCTGGTAGTGGCACGAGGCTCTGGAAGCTGTCACTGGGCAACAGCCTT				17qC	PREDICTED: Mus musculus gene model 88, (NCBI) (Gm88), mRNA.					
Mus musculus	RefSeq	ILMN_209671	ILMN_209671	4933409G03RIK	NM_177651.3	NM_177651.3		227998	126157495	NM_177651.3	4933409G03Rik	NP_808319.1	ILMN_2598069	003450136	S	1107	AAGCAAATGAATAATGACAGTCTCACTGATGGTAATAGTGGGGACAACAC	2	+	68454288-68454337	2qC2	Mus musculus RIKEN cDNA 4933409G03 gene (4933409G03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213835	ILMN_331531	LOC100044767	XM_001472579.1	XM_001472579.1		100044767	149253405	XM_001472579.1	LOC100044767	XP_001472629.1	ILMN_1259831	005670241	S	401	CAACAGACGATCTCTGGACCCGTTTTGTTTTCTCTGCTAGGAGTTGCTGC					PREDICTED: Mus musculus similar to mitofusin 2, transcript variant 1 (LOC100044767), mRNA.					
Mus musculus	RefSeq	ILMN_208835	ILMN_208835	ARF2	NM_007477.4	NM_007477.4		11841	145966732	NM_007477.4	Arf2	NP_031503.1	ILMN_1214810	006370068	S	2541	CCTCCCATTGGCTGGGAGCTCTTGCCCTTTGTAATTATGCTTAGTGTGCC				11qE1	Mus musculus ADP-ribosylation factor 2 (Arf2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence TAS]		
Mus musculus	RefSeq	ILMN_223477	ILMN_230573	LOC674214	XR_004625.1	XR_004625.1		674214	94371793	XR_004625.1	LOC674214		ILMN_2764571	004890392	S	2589	CTACACTGGGCACCTAGTTTCTTCTAGATTGATTGATGCTAACCATTCGG				4qA5	PREDICTED: Mus musculus similar to 4933409K07Rik protein (LOC674214), misc RNA.					
Mus musculus	Riken	ILMN_202010	ILMN_202010	2010309J24RIK	ri|2010309J24|ZX00044O06|AK008554|846					AK008554	2010309J24Rik		ILMN_1236481	007160521	S	361	GGGACTATGCAGTTCTTGCTGCAGAACCTGAGGCACTGAAAGAAAGCTTC										
Mus musculus	RefSeq	ILMN_229485	ILMN_229485	9430025C20RIK	NM_001002777.1	NM_001002777.1		442813	50582578	NM_001002777.1	9430025C20Rik	NP_001002777.1	ILMN_2966687	007650592	S	1322	CTGCCTCCAGTGTGGACTTATGGGTATTTATTCTGCCTCCAGTGTGGACT	4	-	3734527-3734576		Mus musculus RIKEN cDNA 9430025C20 gene (9430025C20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212074	ILMN_212074	HS6ST3	NM_015820.2	NM_015820.2		50787	141802434	NM_015820.2	Hs6st3	NP_056635.1	ILMN_2622420	001850709	S	1366	ACCATCACACCAAACAGCTAGAGCACCAGAGGGACCGCCAAAAGAGGCGC	14	+	120268656-120268705	14qE4	Mus musculus heparan sulfate 6-O-sulfotransferase 3 (Hs6st3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC144860; MGC144859; 6OST3	MGC144860; MGC144859; 6OST3
Mus musculus	Riken	ILMN_207066	ILMN_207066	6430540A14RIK	ri|6430540A14|PX00648F21|AK078251|1067					AK078251	6430540A14Rik		ILMN_1222019	001230113	S	706	GGCAGAGTTTTGGTGAAATTCCCACTGGACCTTTCCTTGGCTCTTTGCTG										
Mus musculus	RefSeq	ILMN_216277	ILMN_227455	HTRA4	NM_001081187.2	NM_001081187.2		330723	148747315	NM_001081187.2	Htra4	NP_001074656.1	ILMN_2669289	002750338	S	1437	CATCATTGTGCTTCGAGGAAGTCAAACCTTGTTTCTGACAGTCACACCTG				8qA2	Mus musculus HtrA serine peptidase 4 (Htra4), mRNA.				B430206E18Rik	B430206E18Rik
Mus musculus	RefSeq	ILMN_218933	ILMN_218933	CRYBB1	NM_023695.2	NM_023695.2		12960	118130494	NM_023695.2	Crybb1	NP_076184.1	ILMN_2702122	006480008	S	633	TACCGTGGCTACCAGTATCTGCTGGAGCCTGGCGACTTCCGGCACTGGAA	5	+	112698362-112698411	5qF	Mus musculus crystallin, beta B1 (Crybb1), mRNA.			The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]	3110006K12Rik; BB1CRY	3110006K12Rik; BB1CRY
Mus musculus	Riken	ILMN_202477	ILMN_202477	TMOD2	ri|6330530F20|PX00043E20|AK018223|1556					AK018223	Tmod2		ILMN_2549920	002370215	S	1002	GGAGTCTTGCTGTGTAGCCTGCATTTTGAACCCACCATGGATCTTGGACT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 45745] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence ISO]		
Mus musculus	RefSeq	ILMN_189433	ILMN_246473	ATP9B	NM_015805.2	NM_015805.2		50771	40807501	NM_015805.2	Atp9b	NP_056620.2	ILMN_2700425	006550703	S	4260	CTTTGCACTAGTACTTTGTATATGCCTGTGCTCTTCAGCTTGACCTCCCC	18	-	80931969-80932018	18qE3	Mus musculus ATPase, class II, type 9B (Atp9b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	MMR; IIb; Atpc2b; AA934181	MMR; IIb; Atpc2b; AA934181
Mus musculus	RefSeq	ILMN_246473	ILMN_246473	ATP9B	NM_015805.2	NM_015805.2		50771	40807501	NM_015805.2	Atp9b	NP_056620.2	ILMN_3002875	004880148	S	4130	GAGGAATTCTGGCCTTAGAGTTAGCCCCAGGAGTTGTGCGTGCAGCTCTG	18	-	80932099-80932148	18qE3	Mus musculus ATPase, class II, type 9B (Atp9b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	MMR; IIb; Atpc2b; AA934181	MMR; IIb; Atpc2b; AA934181
Mus musculus	RefSeq	ILMN_189433	ILMN_246473	ATP9B	NM_015805.2	NM_015805.2		50771	40807501	NM_015805.2	Atp9b	NP_056620.2	ILMN_1242471	000520215	S	1158	GGTGTTGTCATTTATACTGGAAAAGAGACTCGAAGTGTAATGAACACATC	18	-	81033109-81033158	18qE3	Mus musculus ATPase, class II, type 9B (Atp9b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	MMR; IIb; Atpc2b; AA934181	MMR; IIb; Atpc2b; AA934181
Mus musculus	RefSeq	ILMN_195292	ILMN_234385	4922502B01RIK	XM_001000244.1	XM_001000244.1		70954	94384353	XM_001000244.1	4922502B01Rik	XP_001000244.1	ILMN_2514277	006580184	S	1173	CAGGCAACCATCGAGTGCATATAGAGATGTGTGTAAGGCTCTGCGTGTAT				8qD3	PREDICTED: Mus musculus RIKEN cDNA 4922502B01 gene (4922502B01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_192606	ILMN_236240	HLTF	NM_009210.2	NM_009210.2		20585	67763823	NM_009210.2	Hltf	NP_033236.2	ILMN_2588308	004610326	S	3128	CAGACGCCAATGACATGAAACAAGCTAAAATCAACGAAATCAGAACTTTA	3	+	20016549-20016598	3qA2	Mus musculus helicase-like transcription factor (Hltf), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Snf2l3; Smarca3; P113; BC057116; AF010600	Snf2l3; Smarca3; P113; BC057116; AF010600
Mus musculus	RefSeq	ILMN_188652	ILMN_236240	HLTF	NM_009210.2	NM_009210.2		20585	67763823	NM_009210.2	Hltf	NP_033236.2	ILMN_1219759	003940521	S	3816	GGCACAAGGTGTAAATGGTATGTAGGGGTGAAGGAACCAGTTCTACCTGG	3	+	20017237-20017286	3qA2	Mus musculus helicase-like transcription factor (Hltf), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Snf2l3; Smarca3; P113; BC057116; AF010600	Snf2l3; Smarca3; P113; BC057116; AF010600
Mus musculus	RefSeq	ILMN_218911	ILMN_250928	SRP72	NM_025691.1	NM_025691.1		66661	118344451	NM_025691.1	Srp72	NP_079967.1	ILMN_2701837	001240070	S	3438	CTGTATTAACATCTAGTAACTATTTGGGGGAGGTCTTTAACTGGCTCAGT	5	+	77428793-77428842	5qC3.3	Mus musculus signal recognition particle 72 (Srp72), mRNA. XM_896078 XM_896090 XM_896109 XM_916867 XM_924530 XM_924532 XM_924533 XM_924534 XM_924537 XM_924542 XM_924545 XM_973233 XM_974428	A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [evidence ISA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [evidence ISA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	72kDa; C77589; BC019196; AI132477; 5730576P14Rik	72kDa; C77589; BC019196; AI132477; 5730576P14Rik
Mus musculus	RefSeq	ILMN_246424	ILMN_246424	OLFR331	NM_001011861.1	NM_001011861.1		258179	58801479	NM_001011861.1	Olfr331	NP_001011861.1	ILMN_2952006	000940458	S	889	GAGGCTGTGAAGAAACTGTTAGGTGTGAGCACCCTCTTTCAAGAAACAGT	11	-	58315118-58315167	11qB1.3	Mus musculus olfactory receptor 331 (Olfr331), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR275-4	MOR275-4
Mus musculus	RefSeq	ILMN_223637	ILMN_223637	OLFR390	NM_146347.1	NM_146347.1		258344	22129603	NM_146347.1	Olfr390	NP_666459.1	ILMN_2820869	006280008	S	414	CAAGCTCTGTGTGAGTCTTGTGCTGCTGATCTGGGTGCTGACCACATTGT	11	+	73600855-73600904	11qB4	Mus musculus olfactory receptor 390 (Olfr390), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-180L15.5; MOR135-26	RP23-180L15.5; MOR135-26
Mus musculus	RefSeq	ILMN_219076	ILMN_219076	JPH3	NM_020605.2	NM_020605.2		57340	118130503	NM_020605.2	Jph3	NP_065630.1	ILMN_2703948	006450092	S	3326	GGGCCCCGTTGCATACCCAGCACTCCCGGATGTCCAATGTAACTTGTTTC	8	+	124314410-124314459	8qE1	Mus musculus junctophilin 3 (Jph3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IMP]		MGC124339; Jp3; MGC124340; JP-3; MGC124338	MGC124339; Jp3; MGC124340; JP-3; MGC124338
Mus musculus	RefSeq	ILMN_188169	ILMN_188169	TMPRSS6	NM_027902.2	NM_027902.2		71753	125656151	NM_027902.2	Tmprss6	NP_082178.2	ILMN_1227763	000870082	S	2428	AGGTGTCCCCACGCATGCTCTGTGCTGGCTACCGCAAGGGCAAGAAAGAT	15	-	78271046-78271095	15qE1	Mus musculus transmembrane serine protease 6 (Tmprss6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence ISO]	1300008A22Rik	1300008A22Rik
Mus musculus	RefSeq	ILMN_222818	ILMN_222818	PIP5KL1	NM_198191.1	NM_198191.1		227733	38016143	NM_198191.1	Pip5kl1	NP_937834.1	ILMN_1223829	002970201	S	1178	AAGATGGTACGCTATCCAGGCCAGAGCGTCTCCACTGTCAGCCCGGCTCA	2	+	32439004-32439053	2qB	Mus musculus phosphatidylinositol-4-phosphate 5-kinase-like 1 (Pip5kl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]	BC028795	BC028795
Mus musculus	RefSeq	ILMN_196859	ILMN_256579	2410017P09RIK	XR_001632.2	XR_001632.2		69709	149262835	XR_001632.2	2410017P09Rik		ILMN_1244507	003940735	S	2455	GCCTGAGCGAGTGTGCAGATTGTCCTTGGGTGAGTGAGAAAAAACACTGC	12	+	4238648-4238697	12qA1.1	PREDICTED: Mus musculus RIKEN cDNA 2410017P09 gene (2410017P09Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_216259	ILMN_216259	POU5F1	NM_013633.2	NM_013633.2		18999	125490391	NM_013633.2	Pou5f1	NP_038661.2	ILMN_1217100	003450519	S	373	AACCTCCTCTGAGCCCTGTGCCGACCGCCCCAATGCCGTGAAGTTGGAGA	17	+	35643356-35643405	17qB1	Mus musculus POU domain, class 5, transcription factor 1 (Pou5f1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process by which a cell becomes committed to become part of the ectoderm [goid 1712] [evidence IDA]; The process by which a cell becomes committed to become part of the endoderm [goid 1711] [evidence IDA]; The process by which a cell becomes committed to become part of the mesoderm [goid 1710] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion-dependent exocytosis [goid 45955] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process involved in preventing uncommitted germ-line stem cells from differentiating as another cell type [goid 30718] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Otf3-rs7; Oct3/4; Otf-4; Oct-3; Oct-3/4; Otf4; Oct-4; Oct3; Oct4; Otf3; Otf3g; Otf-3	Otf3-rs7; Oct3/4; Otf-4; Oct-3; Oct-3/4; Otf4; Oct-4; Oct3; Oct4; Otf3; Otf3g; Otf-3
Mus musculus	RefSeq	ILMN_216259	ILMN_216259	POU5F1	NM_013633.2	NM_013633.2		18999	125490391	NM_013633.2	Pou5f1	NP_038661.2	ILMN_1252910	007650296	S	724	GGCCCGGAAGAGAAAGCGAACTAGCATTGAGAACCGTGTGAGGTGGAGTC	17	+	35646952-35647001	17qB1	Mus musculus POU domain, class 5, transcription factor 1 (Pou5f1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process by which a cell becomes committed to become part of the ectoderm [goid 1712] [evidence IDA]; The process by which a cell becomes committed to become part of the endoderm [goid 1711] [evidence IDA]; The process by which a cell becomes committed to become part of the mesoderm [goid 1710] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion-dependent exocytosis [goid 45955] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process involved in preventing uncommitted germ-line stem cells from differentiating as another cell type [goid 30718] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Otf3-rs7; Oct3/4; Otf-4; Oct-3; Oct-3/4; Otf4; Oct-4; Oct3; Oct4; Otf3; Otf3g; Otf-3	Otf3-rs7; Oct3/4; Otf-4; Oct-3; Oct-3/4; Otf4; Oct-4; Oct3; Oct4; Otf3; Otf3g; Otf-3
Mus musculus	RefSeq	ILMN_247558	ILMN_247558	2310022A10RIK	NM_175107.3	NM_175107.3		66367	31541873	NM_175107.3	2310022A10Rik	NP_780316.2	ILMN_3004931	000780767	S	2232	GAAAGACTGGGACTGAAGGGGATGATGGCGACAGTTCTCATGGTGAGGCC	7	+	28366727-28366776	7qA3	Mus musculus RIKEN cDNA 2310022A10 gene (2310022A10Rik), mRNA. XM_992364					
Mus musculus	RefSeq	ILMN_215590	ILMN_215590	KCNMB1	NM_031169.3	NM_031169.3		16533	142381129	NM_031169.3	Kcnmb1	NP_112446.2	ILMN_1214965	002490687	S	961	CAGGATGTTGTCCTTGGCCAAATTCAGCTTCTTTGAATTGTCATAAAAAC	11	+	33870684-33870733	11qA4	Mus musculus potassium large conductance calcium-activated channel, subfamily M, beta member 1 (Kcnmb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IGI]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IGI]	BKbeta1	BKbeta1
Mus musculus	RefSeq	ILMN_245115	ILMN_245115	OLFR867	NM_001011748.1	NM_001011748.1		257898	58801283	NM_001011748.1	Olfr867	NP_001011748.1	ILMN_3161367	006580639	S	812	GAAAGGTTGCTTCATTGATGTATACTGTGATCAGCCCCATGCTGAACCCC	9	-	19859044-19859093	9qA3	Mus musculus olfactory receptor 867 (Olfr867), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR143-2	MOR143-2
Mus musculus	RefSeq	ILMN_188409	ILMN_254144	MTF2	NM_013827.2	NM_013827.2		17765	70887768	NM_013827.2	Mtf2	NP_038855.2	ILMN_2452440	004050458	S	3567	GAGAATTTCTTGTCCTGCTTTTGGTTCCTGGTTAACCAGGTATAATGAGC	5	+	108537530-108537579	5qF	Mus musculus metal response element binding transcription factor 2 (Mtf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcl2; 9230112N11Rik; MGC116639; M96; C76717; AA537621	Pcl2; 9230112N11Rik; MGC116639; M96; C76717; AA537621
Mus musculus	RefSeq	ILMN_254144	ILMN_254144	MTF2	NM_013827.2	NM_013827.2		17765	70887768	NM_013827.2	Mtf2	NP_038855.2	ILMN_2823796	004590050	S	3564	GCAGAGAATTTCTTGTCCTGCTTTTGGTTCCTGGTTAACCAGGTATAATG	5	+	108537527-108537576	5qF	Mus musculus metal response element binding transcription factor 2 (Mtf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcl2; 9230112N11Rik; MGC116639; M96; C76717; AA537621	Pcl2; 9230112N11Rik; MGC116639; M96; C76717; AA537621
Mus musculus	RefSeq	ILMN_200251	ILMN_200251	LOC384240	XM_357514.1	XM_357514.1			38081091	XM_357514.1	LOC384240		ILMN_1231241	004200519	S	69	GATCCTCTTTGTTCAATTCATCGATCAGCCCAAGATGGCGCCGGAGCCGC										
Mus musculus	RefSeq	ILMN_214471	ILMN_214471	PPP1R10	NM_175934.2	NM_175934.2		52040	30725839	NM_175934.2	Ppp1r10	NP_787948.1	ILMN_2933394	001430445	S	3892	TTTAGCCGGGTACAGCGGGCCTGAAACACTACATGCACTGCCTTTGGGAG	17	+	36068932-36068981	17qB1	Mus musculus protein phosphatase 1, regulatory subunit 10 (Ppp1r10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	CAT53; 2610025H06Rik; FB19; D17Ertd808e; PNUTS	CAT53; 2610025H06Rik; FB19; D17Ertd808e; PNUTS
Mus musculus	RefSeq	ILMN_214471	ILMN_214471	PPP1R10	NM_175934.2	NM_175934.2		52040	30725839	NM_175934.2	Ppp1r10	NP_787948.1	ILMN_2933399	005260600	S	4061	GAAAACAGTGGGTTGGTTTTGTGAAGGGTCTTGGGTTAGAACCACAATGG	17	+	36069101-36069150	17qB1	Mus musculus protein phosphatase 1, regulatory subunit 10 (Ppp1r10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	CAT53; 2610025H06Rik; FB19; D17Ertd808e; PNUTS	CAT53; 2610025H06Rik; FB19; D17Ertd808e; PNUTS
Mus musculus	RefSeq	ILMN_208936	ILMN_208936	HADH	NM_008212.3	NM_008212.3		15107	142347244	NM_008212.3	Hadh	NP_032238.2	ILMN_2590961	001850767	S	1606	TGCTACCAAGTGCCTATGAATTGACTCTACTAAAATGAAATCTTTTAATT	3	-	130936406-130936455	3qG3	Mus musculus hydroxyacyl-Coenzyme A dehydrogenase (Hadh), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+ [goid 3857] [evidence IDA]	AW742602; AU019341; AA409008; Hadhsc	AW742602; AU019341; AA409008; Hadhsc
Mus musculus	RefSeq	ILMN_188812	ILMN_226055	LOC665532	XM_990997.1	XM_990997.1		665532	94366221	XM_990997.1	LOC665532	XP_996091.1	ILMN_2455928	006770468	S	1329	ACCATATGAAGTATTTTAATAATGTGTTCAGAAATTGCGTTGTCATAGCA				2qB	PREDICTED: Mus musculus hypothetical LOC665532 (LOC665532), mRNA.					
Mus musculus	Riken	ILMN_206089	ILMN_206089	A930027O03RIK	ri|A930027O03|PX00316D12|AK080739|4205					AK080739	A930027O03Rik		ILMN_1218374	004390189	S	3875	TCCCCTGGCCTAAAGAAGGTGATGCCTATCAATGCACAAGAAGCAAACAG										
Mus musculus	RefSeq	ILMN_211679	ILMN_211679	PTK7	NM_175168.3	NM_175168.3		71461	142351040	NM_175168.3	Ptk7	NP_780377.1	ILMN_1250588	004610082	S	3904	GGGAGCTTTTGACACTTATATGACCCGCCCCTTTTGTACGCACCATGGGC	17	-	46701633-46701682	17qC	Mus musculus PTK7 protein tyrosine kinase 7 (Ptk7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The specification and formation of the apicobasal polarity of an epithelial cell [goid 45198] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IC ]	8430404F20Rik; mPTK7/CCK4	8430404F20Rik; mPTK7/CCK4
Mus musculus	Riken	ILMN_202159	ILMN_202159	RAB3C	ri|3110015B08|ZX00071A19|AK014050|968					AK014050	Rab3c		ILMN_1233795	002760114	S	659	GCTCGGGGACTTTCTCTAGTCTCTGAAACCCAAGTCCTATCACGAAGCTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222269	ILMN_222269	SOX13	NM_011439.2	NM_011439.2		20668	119226240	NM_011439.2	Sox13	NP_035569.2	ILMN_1244292	006370168	S	3286	CCCAAGGAAATCATTAGCACCTAGTCAAAGATCTGGAGCTGCCCTGGGGC	1	-	135305500-135305549	1qE4	Mus musculus SRY-box containing gene 13 (Sox13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AA407916; AW540933; Sox-13; AW259412	AA407916; AW540933; Sox-13; AW259412
Mus musculus	Riken	ILMN_206211	ILMN_206211	C130078A06RIK	ri|C130078A06|PX00171B02|AK081792|2407					AK081792	C130078A06Rik		ILMN_1232671	004880504	S	2019	CTGGATCGTGAGGCAGGAGCTTCTACTCCCAGGCTATTGTGATGGGGTCT										
Mus musculus	RefSeq	ILMN_214697	ILMN_214697	E4F1	NM_007893.3	NM_007893.3		13560	144922712	NM_007893.3	E4f1	NP_031919.2	ILMN_2650893	002810725	S	2262	GCCACTGTGACAATGGTGTCATCAGAGGACATAGAGATCCTTGAGCACGG	17	-	24580986-24581035	17qA3.3	Mus musculus E4F transcription factor 1 (E4f1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that modulates the frequency, rate or extent of replication and segregation of genetic material in the embryo [goid 9794] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence TAS]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212641	ILMN_212641	EHD1	NM_010119.5	NM_010119.5		13660	151301069	NM_010119.5	Ehd1	NP_034249.1	ILMN_2628757	002230653	S	2932	TCCACTGAGCTGGGTAGGGCATTGCAGCCTGCTCCTCTGACACTGTAGGT				19qA	Mus musculus EH-domain containing 1 (Ehd1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RME-1; Past1; AA409636	RME-1; Past1; AA409636
Mus musculus	Riken	ILMN_203406	ILMN_203406	GTAR-PENDING	ri|6030410M12|PX00056F05|AK031350|2092					AK031350	Gtar-pending		ILMN_1217410	007560500	S	2024	GTAAGCAATGTAGGCAAGGCTTAGTGTCTAGCAGGCCTAAGGCCCTAGAC										
Mus musculus	RefSeq	ILMN_194402	ILMN_194402	ULK1	NM_009469.3	NM_009469.3		22241	40254401	NM_009469.3	Ulk1	NP_033495.2	ILMN_2506115	006290079	S	20	CTCCCTGACCTGCCAGTCCTTTGTCACGGCTCTGTTCATGCATACTTGAA	5	-	111239031-111239080	5qF	Mus musculus Unc-51 like kinase 1 (C. elegans) (Ulk1), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IMP]; The inward migration of postmitotic granule cells along radial glial cells from the external granule layer to the internal granule cell layer [goid 21933] [evidence IMP]; Long distance growth of a single process [goid 48675] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of collateral sprouting [goid 48671] [evidence IMP]; The process by which cell surface receptors are monoubiquitinated following ligand-induced activation, and subsequently taken up into endocytic vesicles and targeted to the lysosome or vacuole for degradation; serves as a mechanism to downregulate receptor signaling [goid 31623] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of the nerve growth factor receptor signaling pathway [goid 51386] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0722; Unc51.1; AU041434	mKIAA0722; Unc51.1; AU041434
Mus musculus	RefSeq	ILMN_194402	ILMN_194402	ULK1	NM_009469.3	NM_009469.3		22241	40254401	NM_009469.3	Ulk1	NP_033495.2	ILMN_1228475	006330736	S	4692	GCCTCCCTGACCTGCCAGTCCTTTGTCACGGCTCTGTTCATGCATACTTG	5	-	111213962-111214011	5qF	Mus musculus Unc-51 like kinase 1 (C. elegans) (Ulk1), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IMP]; The inward migration of postmitotic granule cells along radial glial cells from the external granule layer to the internal granule cell layer [goid 21933] [evidence IMP]; Long distance growth of a single process [goid 48675] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of collateral sprouting [goid 48671] [evidence IMP]; The process by which cell surface receptors are monoubiquitinated following ligand-induced activation, and subsequently taken up into endocytic vesicles and targeted to the lysosome or vacuole for degradation; serves as a mechanism to downregulate receptor signaling [goid 31623] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of the nerve growth factor receptor signaling pathway [goid 51386] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0722; Unc51.1; AU041434	mKIAA0722; Unc51.1; AU041434
Mus musculus	Riken	ILMN_202405	ILMN_202405	0610025G21RIK	ri|0610025G21|R000004G05|AK002660|561					AK002660	0610025G21Rik		ILMN_2549368	000430280	S	245	TCTCAGATTAAAGGAGCCAGCCAGGACCGTGCAGAAGTACTCCCGAGGGG										
Mus musculus	MEEBO	ILMN_194420	ILMN_194420	GPC4	scl54256.2.172_29				6680058	NM_008150	Gpc4		ILMN_1249702	006280328	S	6	GCTTAATTTTATTAGAAGTAGCCAGTTATTTATTAAAGCACGATGTTAAT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]				
Mus musculus	Riken	ILMN_206077	ILMN_206077	E130009M23RIK	ri|E130009M23|PX00208A02|AK053322|1397					AK053322	E130009M23Rik		ILMN_1224164	006330707	S	1163	GGTTCGCTTCCCAGAACCCACAAGGTGTCTCACAACCATCCGCTGCTCCA										
Mus musculus	RefSeq	ILMN_220872	ILMN_220872	SERTAD4	NM_198247.1	NM_198247.1		214791	38016191	NM_198247.1	Sertad4	NP_937890.1	ILMN_2918656	006280324	S	3002	TGCCAAAAGGAAGAAATAGGTAAGTTCTCCCACTTTCTCCAAGATGAAGC	1	-	194670945-194670994	1qH6	Mus musculus SERTA domain containing 4 (Sertad4), mRNA.				C130018M11Rik; 4833404A09	C130018M11Rik; 4833404A09
Mus musculus	RefSeq	ILMN_220872	ILMN_220872	SERTAD4	NM_198247.1	NM_198247.1		214791	38016191	NM_198247.1	Sertad4	NP_937890.1	ILMN_1229745	000380639	S	2776	GTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCATAGAT	1	-	194671171-194671220	1qH6	Mus musculus SERTA domain containing 4 (Sertad4), mRNA.				C130018M11Rik; 4833404A09	C130018M11Rik; 4833404A09
Mus musculus	RefSeq	ILMN_252441	ILMN_252441	RBM26	NM_134077.4	NM_134077.4		74213	123701990	NM_134077.4	Rbm26	NP_598838.3	ILMN_2852756	001090520	S	3235	CGGCGCTCGCTTCAAAGGGCAGGATTTGAAGCTGGCCTGGAACAAACCAA	14	-	105516255-105516304	14qE2.3	Mus musculus RNA binding motif protein 26 (Rbm26), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Pro1777; 1700009P03Rik; C230097K14Rik; C86225; Se70-2; AI447318	Pro1777; 1700009P03Rik; C230097K14Rik; C86225; Se70-2; AI447318
Mus musculus	Riken	ILMN_201722	ILMN_201722	1600013E24RIK	ri|1600013E24|ZX00042O22|AK005439|2863					AK005439	1600013E24Rik		ILMN_2544063	005050762	S	2484	CATGGAAGTTCTTTTTCCAGAAGCCATCATCTGCTCCATCGCTGCCCTGG										
Mus musculus	RefSeq	ILMN_190159	ILMN_190159	ZFP503	NM_145459.3	NM_145459.3		218820	42734490	NM_145459.3	Zfp503	NP_663434.2	ILMN_2467692	002140241	S	4146	ATAGACAATGTATCGCTTTAAAGATTAAAATTCCGTATATTTGATGTATT	14	-	22803201-22803250	14qA3	Mus musculus zinc finger protein 503 (Zfp503), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Nolz1; AI181838; B830002A16Rik	Nolz1; AI181838; B830002A16Rik
Mus musculus	MEEBO	ILMN_210708	ILMN_210708	SOX2	scl020674.7_60	NM_011443.2			31543758	NM_011443.2	Sox2		ILMN_2656102	000630427	S	997	ACCAGCTCGCAGACCTACATGAACGGCTCGCCCACCTACAGCATGTCCTA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a pigment, any general or particular coloring matter in living organisms, e.g. melanin [goid 46148] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The series of events involved in equilibrioception in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. During equilibrioception, mechanical stimuli may be in the form of input from pressure receptors or from the labyrinth system of the inner ears [goid 50973] [evidence IMP]; The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity [goid 30910] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway [goid 45747] [evidence IDA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IGI]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The process by which the anatomical structures of diencephalon are generated and organized. Morphogenesis pertains to the creation of form. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex [goid 48852] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain [goid 21879] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in man other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech [goid 43586] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form [goid 60042] [evidence IMP]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215582	ILMN_311151	STX11	XM_001472888.1	XM_001472888.1		74732	149260637	XM_001472888.1	Stx11	XP_001472938.1	ILMN_2734340	004220162	S	2039	CTAAAGTGAGGTTCTTGGGGATAGTAATCTACCTTACTCCGAGCCATTCC	10	-	12659865-12659914	10qA1	PREDICTED: Mus musculus syntaxin 11 (Stx11), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210141	ILMN_232291	LENEP	NM_020517.3	NM_020517.3		57275	113866001	NM_020517.3	Lenep	NP_065263.1	ILMN_1252499	005270678	S	1727	ACATTCTTCAGTGAATAAGTGAATATGAATTGGATAATCAAATGTTAAAA	3	-	89204939-89204988	3qF1	Mus musculus lens epithelial protein (Lenep), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]			Lep503; AU018355	Lep503; AU018355
Mus musculus	MEEBO	ILMN_186240	ILMN_186240	2610312B22RIK	scl20701.4_219				34368583	NM_026934	2610312B22Rik		ILMN_2433835	004640373	S	20	ACTACTATTGTTTGCAAAGAACAAAAATTTAAATAAATGGTGCTTAGAAT										
Mus musculus	RefSeq	ILMN_188462	ILMN_251549	PEX11A	NM_011068.1	NM_011068.1		18631	6755033	NM_011068.1	Pex11a	NP_035198.1	ILMN_1249264	002000259	S	118	GCCACTCAGCACGCATGCATGTTGCTTAGATATTTGTTAGAGTCTAAAGC	7	-	86885115-86885164	7qD3	Mus musculus peroxisomal biogenesis factor 11a (Pex11a), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments [goid 16559] [evidence IEA]		PEX11alpha	PEX11alpha
Mus musculus	RefSeq	ILMN_188462	ILMN_251549	PEX11A	NM_011068.1	NM_011068.1		18631	6755033	NM_011068.1	Pex11a	NP_035198.1	ILMN_2700265	000610482	S	757	CTCCTCACGGTAGTGTATCCTCAGCTGAAACTGAAGGCCCGCTAGGGTGT	7	-	86882222-86882227:86882228-86882271	7qD3	Mus musculus peroxisomal biogenesis factor 11a (Pex11a), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments [goid 16559] [evidence IEA]		PEX11alpha	PEX11alpha
Mus musculus	RefSeq	ILMN_251549	ILMN_251549	PEX11A	NM_011068.1	NM_011068.1		18631	6755033	NM_011068.1	Pex11a	NP_035198.1	ILMN_2960982	006020543	S	536	CCTCTCGGGACCCTCCTAAGTACAGCGTGGCTAATGAAGAGACTGAATGG	7	-	86882443-86882492	7qD3	Mus musculus peroxisomal biogenesis factor 11a (Pex11a), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments [goid 16559] [evidence IEA]		PEX11alpha	PEX11alpha
Mus musculus	RefSeq	ILMN_218615	ILMN_218615	LTV1	NM_181470.4	NM_181470.4		353258	148539946	NM_181470.4	Ltv1	NP_852135.1	ILMN_2698115	004480193	S	1571	GCTCTGTAATTAACCAGGATCTGAAGAGGGGTGAGCTTGCCCCTGCCATT				10qA2	Mus musculus LTV1 homolog (S. cerevisiae) (Ltv1), mRNA.				2610020N02Rik	2610020N02Rik
Mus musculus	Riken	ILMN_206818	ILMN_206818	D930031I08RIK	ri|D930031I08|PX00202H05|AK086483|2003					AK086483	D930031I08Rik		ILMN_1234147	007150440	S	1791	CAGGACTGCTGAAGGAAGAGGGTGGGGCTGCCATTTACCTTTGCCCTGCA										
Mus musculus	RefSeq	ILMN_200377	ILMN_200377	LOC386369	XM_359188.1	XM_359188.1			38081468	XM_359188.1	LOC386369		ILMN_1250903	000540376	S	247	GCTCCATCCTACTCAGAGGGACAGAATCCGGACAGCTCCGTTAACCTAGG										
Mus musculus	MEEBO	ILMN_213521	ILMN_213521	LOC243453	IGKV4-81_AJ231215_Ig_kappa_variable_4-81_15	XM_144819.1			20823658	XM_144819.1	LOC243453		ILMN_2637876	004880520	S	34	TAATCAGTGTCTCAGTCATAATGTCCAGAGGAGAAAATGTGCTGACCCAG										
Mus musculus	RefSeq	ILMN_230623	ILMN_230623	SORBS1	NM_178362.1	NM_178362.1		20411	78000172	NM_178362.1	Sorbs1	NP_848139.1	ILMN_3020654	002100735	I	2198	CAGCTTCTGCCAAGCAGAGTTAGAGGCAGATTTAGAGAAAGTGGAGACCG	19	-	40414566-40414615	19qC3	Mus musculus sorbin and SH3 domain containing 1 (Sorbs1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; An adherens junction which connects a cell to the extracellular matrix [goid 5924] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts [goid 43149] [evidence IDA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the insulin receptor [goid 5158] [evidence IDA]	SH3P12; 2310065E01Rik; Sh3d5; mKIAA1296; CAP; 9530001P15Rik	SH3P12; 2310065E01Rik; Sh3d5; mKIAA1296; CAP; 9530001P15Rik
Mus musculus	RefSeq	ILMN_209002	ILMN_209002	CCL24	NM_019577.4	NM_019577.4		56221	142351670	NM_019577.4	Ccl24	NP_062523.1	ILMN_1225406	007330681	S	266	CATCACCAAGAAGGGCCATAAGATCTGTACTGACCCCAAGCTGCTGTGGG	5	-	136046780-136046829	5qG2	Mus musculus chemokine (C-C motif) ligand 24 (Ccl24), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	Scya24; CKb-6; MPIF-2	Scya24; CKb-6; MPIF-2
Mus musculus	Riken	ILMN_204430	ILMN_204430	NELF	ri|A630014A09|PX00144B05|AK041478|1571					AK041478	Nelf		ILMN_1223557	006020059	S	1235	GAACAACTCATCAAGGTGGGCTGCACCCTAAGGACCTCTCACCCCTCTGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_212087	ILMN_230470	KREMEN1	NM_032396.3	NM_032396.3		84035	88900497	NM_032396.3	Kremen1	NP_115772.2	ILMN_2651035	000620079	S	1535	TCCAAGCTCGAGTTTGCTCCCCTGAGTTCTCCTCTGATGAGTTCCCTGCC	11	-	5094878-5094927	11qA1	Mus musculus kringle containing transmembrane protein 1 (Kremen1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Kremen; AV002070	Kremen; AV002070
Mus musculus	RefSeq	ILMN_216233	ILMN_310433	LOC100046255	XM_001475886.1	XM_001475886.1		100046255	149264141	XM_001475886.1	LOC100046255	XP_001475936.1	ILMN_1244976	003170468	S	1079	TCCTACCCCTTCCATAGACCTGTGCTCCCCATCCCGCCTGTTGGACTCTA					PREDICTED: Mus musculus similar to homeobox protein (LOC100046255), mRNA.					
Mus musculus	MEEBO	ILMN_188294	ILMN_188294	IGHV1S59_L17134_IG_HEAVY_VARIABLE_1S59_150	IGHV1S59_L17134_Ig_heavy_variable_1S59_150						IGHV1S59_L17134_Ig_heavy_variable_1S59_150		ILMN_2451451	002230327	S	15	TGGTGGTACTAGCTACAATCAGAAGTTCAAGGGCAAGGCCACATTGACTG										
Mus musculus	RefSeq	ILMN_209045	ILMN_209045	LLPH	NM_025431.2	NM_025431.2		66225	34328272	NM_025431.2	Llph	NP_079707.1	ILMN_1222823	005690333	S	654	AACCCAGAAACTTTGTTTTCAGTTTGTACTTAGTTCTGTAATTCAAACCA	10	+	119668618-119668667	10qD2	Mus musculus LLP homolog, long-term synaptic facilitation (Aplysia) (Llph), mRNA.				MGC117871	MGC117871
Mus musculus	RefSeq	ILMN_209045	ILMN_209045	LLPH	NM_025431.2	NM_025431.2		66225	34328272	NM_025431.2	Llph	NP_079707.1	ILMN_2596834	001030064	S	770	GTTGTGATTGGATACTGCCTGGCACTGAGTATTGTAAGCATTGATGTGGT	10	+	119668734-119668783	10qD2	Mus musculus LLP homolog, long-term synaptic facilitation (Aplysia) (Llph), mRNA.				MGC117871	MGC117871
Mus musculus	RefSeq	ILMN_209045	ILMN_209045	LLPH	NM_025431.2	NM_025431.2		66225	34328272	NM_025431.2	Llph	NP_079707.1	ILMN_2878486	007150753	S	1073	TCTTAAAAAGGCCATCAGTGGATCTTACCAGTAGTACTTACTTGAAGTGT	10	+	119669037-119669086	10qD2	Mus musculus LLP homolog, long-term synaptic facilitation (Aplysia) (Llph), mRNA.				MGC117871	MGC117871
Mus musculus	RefSeq	ILMN_217149	ILMN_217149	RB1	NM_009029.1	NM_009029.1		19645	6677678	NM_009029.1	Rb1	NP_033055.1	ILMN_2861644	000010438	S	4421	CAGAGATCCTGCTTCGAGATTTCTTAAAGCTGCAGACACTGCACTATTGG	14	-	73595412-73595461	14qD3	Mus musculus retinoblastoma 1 (Rb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence IGI]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IGI]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IGI]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rb; Rb-1; pRb	Rb; Rb-1; pRb
Mus musculus	RefSeq	ILMN_217149	ILMN_217149	RB1	NM_009029.1	NM_009029.1		19645	6677678	NM_009029.1	Rb1	NP_033055.1	ILMN_2679619	002480048	S	4002	GATGAAAACAGCTGCATTGAAAATAGAGGCACTCCCTTCACCCCCCACCT	14	-	73595831-73595880	14qD3	Mus musculus retinoblastoma 1 (Rb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence IGI]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IGI]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IGI]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rb; Rb-1; pRb	Rb; Rb-1; pRb
Mus musculus	RefSeq	ILMN_199229	ILMN_199229	LOC380738	XM_358415.1	XM_358415.1			38091998	XM_358415.1	LOC380738		ILMN_2534501	003140176	S	544	CTGAAGAGAATCCCAGCATCTCAGGCAAGGGCCAGGTGCAAGCAGAGAGC										
Mus musculus	RefSeq	ILMN_215210	ILMN_215210	PPWD1	NM_172807.2	NM_172807.2		238831	142386455	NM_172807.2	Ppwd1	NP_766395.1	ILMN_2656803	005340725	S	2047	ATCATGTTTTAAAATATAAACACTGTATTTTTGTATTTTTACTTAAAGGC	13	-	104995449-104995498	13qD1	Mus musculus peptidylprolyl isomerase domain and WD repeat containing 1 (Ppwd1), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	4632422M10Rik; A330090G21Rik	4632422M10Rik; A330090G21Rik
Mus musculus	RefSeq	ILMN_220112	ILMN_314629	4933427E11RIK	XR_035258.1	XR_035258.1		66769	149266947	XR_035258.1	4933427E11Rik		ILMN_1217373	006380026	S	619	GGGTGCCCAGTCTCTAGATCCCTGAACCTGCGAGTTCAAGAGCTGAAAGG				15qD3	PREDICTED: Mus musculus RIKEN cDNA 4933427E11 gene (4933427E11Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_214197	ILMN_214197	SLC16A7	NM_011391.1	NM_011391.1		20503	6755535	NM_011391.1	Slc16a7	NP_035521.1	ILMN_2645399	006100682	S	2341	CACAAAGAATTACACATGTATCTACGAAAACACTGAGTATCGGGAGATCA	10	-	124664569-124664618	10qD3	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 7 (Slc16a7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism [goid 15355] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	4921534N07Rik; Mct2; MGC143700; MGC143718; MGC143699	4921534N07Rik; Mct2; MGC143700; MGC143718; MGC143699
Mus musculus	MEEBO	ILMN_188264	ILMN_188264	C130069I09RIK	scl31590.1.2_304				51744705	XM_133337	C130069I09Rik		ILMN_1257392	002000324	S	294	CCTTGACATTTGGAATGTTGACGGCACCAACTGCCACCCAAAAGTTCTTC										
Mus musculus	RefSeq	ILMN_209387	ILMN_209387	MAB21L2	NM_011839.2	NM_011839.2		23937	31560521	NM_011839.2	Mab21l2	NP_035969.2	ILMN_2595346	000580519	S	2124	GTGCCAATGTCAATGTGCCCCTGCCTCCTCCTTTTGCACCCCTAACCCCC	3	-	86632037-86632086	3qF1	Mus musculus mab-21-like 2 (C. elegans) (Mab21l2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process by which the anatomical structures of the embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 10172] [evidence IMP]			
Mus musculus	Riken	ILMN_207279	ILMN_207279	G630032N15RIK	ri|G630032N15|PL00013K03|AK090275|1785					AK090275	G630032N15Rik		ILMN_1238442	007550398	S	1665	CTTCAGGATATTCAGCACCTTCCTCTGGCCTTCTCAGGTACTAGGCATGC										
Mus musculus	RefSeq	ILMN_221252	ILMN_221252	IL9	NM_008373.1	NM_008373.1		16198	6680436	NM_008373.1	Il9	NP_032399.1	ILMN_2733017	007160274	S	430	AGGCAGAAAAGCCGACCATGAAGACAGATGCTATTTATTCTATTTATTGA	13	-	56580694-56580723:56580724-56580743	13qB1	Mus musculus interleukin 9 (Il9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-5 [goid 45407] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA];  [goid 5126] [evidence IEA]	P40; Il-9	P40; Il-9
Mus musculus	RefSeq	ILMN_199107	ILMN_199107	LOC277281	XM_203729.3	XM_203729.3			38090966	XM_203729.3	LOC277281		ILMN_1220677	006450670	S	492	ACATGGAAGAGAGAATCTCAGGTGCAGAAGATTCCATACAGAACACGGGC										
Mus musculus	RefSeq	ILMN_211072	ILMN_322377	LOC100047915	XM_001479122.1	XM_001479122.1		100047915	149269416	XM_001479122.1	LOC100047915	XP_001479172.1	ILMN_1235122	007510402	S	319	CAAGTGGATCCATCTGTTACCCGGAGAATTTTCATCCTTGGGCCTTCCCA					PREDICTED: Mus musculus similar to Memo1 protein (LOC100047915), mRNA.					
Mus musculus	RefSeq	ILMN_211072	ILMN_322377	LOC100047915	XM_001479122.1	XM_001479122.1		100047915	149269416	XM_001479122.1	LOC100047915	XP_001479172.1	ILMN_2612218	004860056	S	1224	AAGGCTGGAATCAAAATATTTGCCCAAATTGGCACACAGTGACTTGTAAA					PREDICTED: Mus musculus similar to Memo1 protein (LOC100047915), mRNA.					
Mus musculus	RefSeq	ILMN_211072	ILMN_322377	LOC100047915	XM_001479122.1	XM_001479122.1		100047915	149269416	XM_001479122.1	LOC100047915	XP_001479172.1	ILMN_2617522	003800450	S	1409	TGTATTAGAATATAAGAAATCTCCAGTTATAGACAATTACTACCCATGTT					PREDICTED: Mus musculus similar to Memo1 protein (LOC100047915), mRNA.					
Mus musculus	RefSeq	ILMN_219403	ILMN_219403	AU018778	NM_144930.1	NM_144930.1		234564	21450338	NM_144930.1	AU018778	NP_659179.1	ILMN_1238140	004390619	S	1705	GCTCTGCCAGGCTTATACCAGAGAAGCCAAGATATGGTTCTTCCACTAAC	8	-	95780270-95780319	8qC5	Mus musculus expressed sequence AU018778 (AU018778), mRNA.			Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	TGH-2; MGC18894	TGH-2; MGC18894
Mus musculus	Riken	ILMN_204411	ILMN_204411	A230019I20RIK	ri|A230019I20|PX00126O22|AK038481|1552					AK038481	A230019I20Rik		ILMN_1259152	004780053	S	1257	CAACTTGGGCATCAGCAGGGACACAGTCAGCTGCTTTACTGGGTACAGGT										
Mus musculus	MEEBO	ILMN_186303	ILMN_186303	SCL0001259.1_60	scl0001259.1_60						scl0001259.1_60		ILMN_1250550	002900519	S	20	GACTCTCGTCTGTCTTGGAAGGTTCAGTTCCTGGTTTTCTTGCCACTGTC										
Mus musculus	RefSeq	ILMN_192641	ILMN_232827	TRIP13	NM_027182.2	NM_027182.2		69716	142350962	NM_027182.2	Trip13	NP_081458.1	ILMN_2489976	006350709	S	1588	GGCCAGACAGATGGGTGTACAATCTTTGTCAAAAGGACTATGTGTTATTT	13	-	74050539-74050588	13qC1	Mus musculus thyroid hormone receptor interactor 13 (Trip13), mRNA.	The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]	The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The cell cycle process whereby the first meiotic division occurs in the female germline [goid 7144] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D13Ertd328e; 2410002G23Rik	D13Ertd328e; 2410002G23Rik
Mus musculus	RefSeq	ILMN_197013	ILMN_225329	EG626058	XM_890619.3	XM_890619.3		626058	149234306	XM_890619.3	EG626058	XP_895712.2	ILMN_2526595	002810609	S	264	ACATCAGACCTGCCTCTTGTCTTCCATGTGCTGGGATCAAAGGTGGGCGC	1	-	155254811-155254819:155255467-155255507	1qG3	PREDICTED: Mus musculus predicted gene, EG626058 (EG626058), mRNA.					
Mus musculus	RefSeq	ILMN_213279	ILMN_213279	IL11RA1	NM_010549.2	NM_010549.2		16157	141802044	NM_010549.2	Il11ra1	NP_034679.1	ILMN_1229957	000060041	S	1630	GTACAGATGATTGGAGAGTGTGTGCGGTCTTGGGCTTGGCCCTTCTGGGA	4	+	41716258-41716307	4qA5	Mus musculus interleukin 11 receptor, alpha chain 1 (Il11ra1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IMP]; A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with interleukin-11 [goid 19970] [evidence IPI]; Combining with interleukin-11 to initiate a change in cell activity [goid 4921] [evidence IDA]	GP130; Il11ra2; NR1; Il11ra; AI314697	GP130; Il11ra2; NR1; Il11ra; AI314697
Mus musculus	RefSeq	ILMN_211793	ILMN_213279	IL11RA1	NM_010549.2	NM_010549.2		16157	141802044	NM_010549.2	Il11ra1	NP_034679.1	ILMN_2619594	002360114	S	1586	CGTGTGTGTATGTGAGACAGGGAGCAAAAGTTCTCTGCATGTGTGTACAG	4	+	41716214-41716263	4qA5	Mus musculus interleukin 11 receptor, alpha chain 1 (Il11ra1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IMP]; A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with interleukin-11 [goid 19970] [evidence IPI]; Combining with interleukin-11 to initiate a change in cell activity [goid 4921] [evidence IDA]	GP130; Il11ra2; NR1; Il11ra; AI314697	GP130; Il11ra2; NR1; Il11ra; AI314697
Mus musculus	Riken	ILMN_205767	ILMN_205767	D030006J20RIK	ri|D030006J20|PX00178L05|AK050705|1585					AK050705	D030006J20Rik		ILMN_1244495	001400609	S	1400	TGAGGGGCTGGAGTGATAGCCCACCCTTTAAGTGTACCTGGCTGCTCTTC										
Mus musculus	RefSeq	ILMN_211943	ILMN_245333	5730403I07RIK	XM_489285.3	XM_489285.3		70487	94386241	XM_489285.3	5730403I07Rik	XP_489285.2	ILMN_1245939	000160112	S	1852	GGAACCTCTCCTTGGGAGGATCTGTTACTTGAGAGCACACGTATCACATC	9	-	77214348-77214397	9qD	PREDICTED: Mus musculus RIKEN cDNA 5730403I07 gene (5730403I07Rik), mRNA.					
Mus musculus	MEEBO	ILMN_210989	ILMN_210989	PTP4A2	scl019244.5_2	NM_008974.2			31543525	NM_008974.2	Ptp4a2		ILMN_1243291	005820646	S	1643	TGTGCCCCTGATCTACCATTAGGGTGTGAGAGGTAGCCAGGAACCTTTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	Riken	ILMN_205162	ILMN_205162	A630043I05RIK	ri|A630043I05|PX00146A15|AK041876|506					AK041876	A630043I05Rik		ILMN_2570461	000780474	S	391	ACCTGAGTCATCCCATCAACCAGGCCAAGTGTCTAACTCTAGCTCCAGGC										
Mus musculus	RefSeq	ILMN_188457	ILMN_226990	ZDHHC16	NM_023740.1	NM_023740.1		74168	12963806	NM_023740.1	Zdhhc16	NP_076229.1	ILMN_2452849	003360025	S	1185	CTTGTTGATATGCCTTTCGATGCTAGTCTCACCCCGACTGATGAGAACAG	19	+	42016110-42016129:42016426-42016455	19qC3	Mus musculus zinc finger, DHHC domain containing 16 (Zdhhc16), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1500015N03Rik; Aph2	1500015N03Rik; Aph2
Mus musculus	RefSeq	ILMN_226990	ILMN_226990	ZDHHC16	NM_023740.1	NM_023740.1		74168	12963806	NM_023740.1	Zdhhc16	NP_076229.1	ILMN_2964608	000770471	S	1334	ATGGGAATGGGATGAGCTGGGACCCTCCTCCCTGGGTGACTGCTCACTCA	19	+	42018130-42018179	19qC3	Mus musculus zinc finger, DHHC domain containing 16 (Zdhhc16), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1500015N03Rik; Aph2	1500015N03Rik; Aph2
Mus musculus	RefSeq	ILMN_193075	ILMN_226990	ZDHHC16	NM_023740.1	NM_023740.1		74168	12963806	NM_023740.1	Zdhhc16	NP_076229.1	ILMN_2493874	004920551	S	1239	CTATGGCTGCTTGGACAACTGGAAGGTGTTCCTAGGTGTGGACACAGGAA	19	+	42016460-42016496:42018072-42018084	19qC3	Mus musculus zinc finger, DHHC domain containing 16 (Zdhhc16), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1500015N03Rik; Aph2	1500015N03Rik; Aph2
Mus musculus	RefSeq	ILMN_221371	ILMN_221371	FSTL1	NM_008047.4	NM_008047.4		14314	145966858	NM_008047.4	Fstl1	NP_032073.2	ILMN_2734683	000460576	S	2893	GAGAGGGCAGGAGTATCAATTTGTTCAAGTAGCTGCAGTGTCTGTTGGCC				16qB3	Mus musculus follistatin-like 1 (Fstl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Fstl; AI316791; TSC-36; AW107808	Fstl; AI316791; TSC-36; AW107808
Mus musculus	RefSeq	ILMN_218936	ILMN_218936	CLEC4F	NM_016751.3	NM_016751.3		51811	142376709	NM_016751.3	Clec4f	NP_058031.2	ILMN_2702159	001170220	S	1837	TCTTAAAGACAAGCCCTGCATTGGAGTCCCCTCAGCACCCCATGTCTGCC	6	-	83595049-83595098	6qC3	Mus musculus C-type lectin domain family 4, member f (Clec4f), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KUCR_MOUSE; D18063; Kclr; Clecsf13	KUCR_MOUSE; D18063; Kclr; Clecsf13
Mus musculus	RefSeq	ILMN_221236	ILMN_221236	TAGLN2	NM_178598.2	NM_178598.2		21346	110349995	NM_178598.2	Tagln2	NP_848713.1	ILMN_2732848	006370204	S	1010	CCCCACAGCATCTTTCCTGCTTTCCTGATCTCTTCTTTTAGTCCATCCCT	1	+	174437134-174437183	1qH3	Mus musculus transgelin 2 (Tagln2), mRNA.		The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]		2700094C18Rik; Sm22a; KIAA0120; Sm22B; SM22beta	2700094C18Rik; Sm22a; KIAA0120; Sm22B; SM22beta
Mus musculus	RefSeq	ILMN_223247	ILMN_223247	FLT3	NM_010229.2	NM_010229.2		14255	122937352	NM_010229.2	Flt3	NP_034359.2	ILMN_2761370	004810482	S	3507	CTTGTAAATACGTGAAACAAACCAAACCCGTTTTTTGCTAAGGGAAAGCT	5	-	148142417-148142466	5qG3	Mus musculus FMS-like tyrosine kinase 3 (Flt3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby a relatively unspecialized precursor cell acquires specialized features of B cells, T cells, or natural killer cells [goid 30098] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Flk-2; CD135; B230315G04; MGC124378; Flt-3; Ly72; MGC124377	Flk-2; CD135; B230315G04; MGC124378; Flt-3; Ly72; MGC124377
Mus musculus	RefSeq	ILMN_214421	ILMN_214421	BSG	NM_009768.2	NM_009768.2		12215	116014344	NM_009768.2	Bsg	NP_033898.1	ILMN_2647835	003990703	S	413	TACCGTCAGCATGCAGCCAGTTCGCTCTCTGTTGATGGGCTCACCGCAGA	10	+	79171627-79171676	10qC1	Mus musculus basigin (Bsg), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	EMMPRIN; HT-7; CD147; AI325119; AI115436	EMMPRIN; HT-7; CD147; AI325119; AI115436
Mus musculus	Riken	ILMN_202572	ILMN_202572	1700112M01RIK	ri|1700112M01|ZX00077J12|AK007184|578					AK007184	1700112M01Rik		ILMN_1234498	003450594	S	396	CGGAACCTGCCAATCCCTGCGTTCCCGTATCAGAGCCCAGCGTGTCTAAT										
Mus musculus	RefSeq	ILMN_190053	ILMN_250700	SCN5A	NM_021544.3	NM_021544.3		20271	118130439	NM_021544.3	Scn5a	NP_067519.2	ILMN_1250265	006180475	S	6535	GCAACTCTGTCCCCCTCTGAGGTGAAACGGGAAACACACTGTACATGTTG	9	-	119394396-119394445	9qF3-qF4	Mus musculus sodium channel, voltage-gated, type V, alpha (Scn5a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; Specialised type of cell-cell junction in cardiac muscle, which mediates mechanical and electrochemical integration between the individual cardiomyocytes. Consist of three different kinds of substructures: adherens junctions, desmosomes and gap junctions [goid 14704] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	SkM1; Nav1.5c; mH1; Nav1.5	SkM1; Nav1.5c; mH1; Nav1.5
Mus musculus	MEEBO	ILMN_193038	ILMN_193038	A530017D24RIK	scl40112.2.1_30						A530017D24Rik		ILMN_2493544	003450438	S	5	AGCTGCTGTGACATTCACATTCAGACCCTTACTTGGAAGGCTACCCTCTC										
Mus musculus	RefSeq	ILMN_198163	ILMN_198163	LOC240089	XM_139915.2	XM_139915.2			38082326	XM_139915.2	LOC240089		ILMN_1237884	000130356	S	61	ATTGTATTTGCAGCCTTCGCTGCGGCCCCATCCGGTGCTCTCCAATGCCA										
Mus musculus	MEEBO	ILMN_224238	ILMN_224238	OLFR1115	scl0258294.1_254				22129694	NM_146297	Olfr1115		ILMN_2777179	004230148	S	847	GAGGAGACAGACAAACTTCTCTCTGTGTTTTATACCATTTTGACCCCAAT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_217994	ILMN_217994	PKIB	NM_008863.3	NM_008863.3		18768	84794590	NM_008863.3	Pkib	NP_032889.3	ILMN_3094853	006280014	A	196	CAGGTTCGGAGAGGAACGATAAAGGAAAAACTCCCTTTCGGCTTCATCCT	10	+	57371956-57371979:57412009-57412034	10qB4	Mus musculus protein kinase inhibitor beta, cAMP dependent, testis specific (Pkib), transcript variant 1, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IEA]	PKIbeta; Prkacn2	PKIbeta; Prkacn2
Mus musculus	RefSeq	ILMN_196533	ILMN_329373	WDR82	NM_029896.1	NM_029896.1		77305	148223078	NM_029896.1	Wdr82	NP_084172.1	ILMN_2746483	007320482	S	3295	CCACAGACCTGAGTTATGTTCCGAATTGGTAGGAAAAGGTGCAGCTGGAG				9qF1	Mus musculus WD repeat domain containing 82 (Wdr82), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			CDW5/WDR82; 9430077D24Rik	CDW5/WDR82; 9430077D24Rik
Mus musculus	RefSeq	ILMN_221092	ILMN_221092	SULT5A1	NM_020564.2	NM_020564.2		57429	142377411	NM_020564.2	Sult5a1	NP_065589.1	ILMN_2731020	002190753	S	363	GAACACTTCCTGGCCTCGGCTCTTCACCTCCCACTTGAACGCCAAAGGAC	8	-	125673151-125673200	8qE1	Mus musculus sulfotransferase family 5A, member 1 (Sult5a1), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Sult-x1; Sultx1	Sult-x1; Sultx1
Mus musculus	MEEBO	ILMN_190971	ILMN_190971	C230081A13RIK	scl35807.7.563_28				27370423	NM_172924	C230081A13Rik		ILMN_1218366	000540132	S	9	GGTTATCCGTTTAGCGTCACCATCACCTTAGAAAGCTACCCGAAGCTGGC							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190451	ILMN_190451	MTDNA_ATP6	mtDNA_ATP6						mtDNA_ATP6		ILMN_2470277	005860520	S	9	CTCCTAGGCCTTTTACCACATACATTTACACCTACTACCCAACTATCCAT										
Mus musculus	RefSeq	ILMN_256882	ILMN_256882	ANGPTL7	NM_001039554.1	NM_001039554.1		654812	88196772	NM_001039554.1	Angptl7	NP_001034643.1	ILMN_2844820	006520451	S	1875	GAACACCAGCCGGAGGTGAGCACAGACTCTGGGTGATCACAATACTGCCT	4	-	147339217-147339266	4qE2	Mus musculus angiopoietin-like 7 (Angptl7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	RefSeq	ILMN_256882	ILMN_256882	ANGPTL7	NM_001039554.1	NM_001039554.1		654812	88196772	NM_001039554.1	Angptl7	NP_001034643.1	ILMN_2844819	001980605	S	1815	TGTCAGAGTCCTGGGGGAGAGAGGAGCACTGGACAACATGCTGCGGGTCT	4	-	147339277-147339326	4qE2	Mus musculus angiopoietin-like 7 (Angptl7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199338	ILMN_199338	LOC385292	XM_358174.1	XM_358174.1			38096826	XM_358174.1	LOC385292		ILMN_1259923	003440482	S	78	TCGAGTGTCGCTGACATTGATAGAGAGGGAGCACCCTGCAGGACGCCGTA										
Mus musculus	MEEBO	ILMN_213197	ILMN_213197	5730407K14RIK	scl070479.3_193	XM_355366.1			38075247	XM_355366.1	5730407K14Rik		ILMN_1243734	006370465	S	1049	AATGCTTGAAAATCTGAAGCATTTGAGTGTCCACGTGAGGCCGCAAGTGG										
Mus musculus	RefSeq	ILMN_196659	ILMN_196659	C130035G06RIK	XM_207385.3	XM_207385.3			38080850	XM_207385.3	C130035G06Rik		ILMN_1215416	003130037	S	1174	TCTGCTGGCCTAGAAGTTTTGGCTCCAGAGAGGGGAGTCCTCCTACCAGG										
Mus musculus	Riken	ILMN_207435	ILMN_207435	KIF9	ri|4933417D18|PX00642O09|AK077169|2105					AK077169	Kif9		ILMN_2587574	003440541	S	1427	GCTTGTATCATCAACGCGCTCAATCTGAGAAGGACTGGGGTGGATCAAGG						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185622	ILMN_238101	RBM28	NM_026650.1	NM_026650.1		68272	21536229	NM_026650.1	Rbm28	NP_080926.1	ILMN_2661250	000630504	S	85	ACTAGGGAAGACCGCATTTCTCCTCTTGCCTTCACTGCGAACTTGGCCCA	6	-	29104957-29105006	6qA3.3	Mus musculus RNA binding motif protein 28 (Rbm28), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI503051; MGC38664; 2810480G15Rik; MGC12075	AI503051; MGC38664; 2810480G15Rik; MGC12075
Mus musculus	RefSeq	ILMN_213712	ILMN_213712	GABRG2	NM_177408.3	NM_177408.3		14406	83921590	NM_177408.3	Gabrg2	NP_803127.2	ILMN_3051129	006400647	I	2822	GTGACTTGCATGGAGGACATGGAGCCTCTGACTGTGGGCTCATTTTGCTC	11	-	41754257-41754306	11qA5	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 (Gabrg2), transcript variant 2, mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]	BB128510; AI851231; GABAA-R; Gabrg-2; gamma2	BB128510; AI851231; GABAA-R; Gabrg-2; gamma2
Mus musculus	RefSeq	ILMN_213712	ILMN_213712	GABRG2	NM_177408.3	NM_177408.3		14406	83921590	NM_177408.3	Gabrg2	NP_803127.2	ILMN_3127420	004560170	A	1042	GGAGTATGGCACCCTGCATTATTTTGTCAGCAACCGGAAGCCAAGCAAGG	11	-	41759729-41759778	11qA5	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 (Gabrg2), transcript variant 2, mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]	BB128510; AI851231; GABAA-R; Gabrg-2; gamma2	BB128510; AI851231; GABAA-R; Gabrg-2; gamma2
Mus musculus	RefSeq	ILMN_208844	ILMN_227737	FAM154A	NM_001081096.1	NM_001081096.1		75811	124487359	NM_001081096.1	Fam154a	NP_001074565.1	ILMN_1257206	006510209	S	1491	CATCCCCGTAGAGGGCCAGACTACTTATTCCATCAACTTTACTCCCAAGG	4	-	86090896-86090945	4qC4	Mus musculus family with sequence similarity 154, member A (Fam154a), mRNA.				RP23-102G9.3	RP23-102G9.3
Mus musculus	RefSeq	ILMN_217858	ILMN_323867	LOC100044702	XM_001472699.1	XM_001472699.1		100044702	149254191	XM_001472699.1	LOC100044702	XP_001472749.1	ILMN_1230278	006180202	S	1530	AAGCCTGTACATCTTATAGTGTCTCACTTCTTTATATTACTCTTTTGAGG					PREDICTED: Mus musculus similar to LPS-induced CXC chemokine (LOC100044702), mRNA.					
Mus musculus	RefSeq	ILMN_200492	ILMN_200492	LOC384323	XM_357570.1	XM_357570.1			38082714	XM_357570.1	LOC384323		ILMN_2538959	000060669	S	298	AAGATGTTTCAGGATGTAAGTCGCCAACCCTGGACTCAGGCAGAAGCAGC										
Mus musculus	RefSeq	ILMN_211410	ILMN_211410	SFT2D1	NM_134114.2	NM_134114.2		106489	88853574	NM_134114.2	Sft2d1	NP_598875.2	ILMN_2773241	006420221	S	984	AGTGTAATAAAAAAGTAATATATGTATCTTTACAGTTTTGAAATAAACTA	17	+	8520243-8520292	17qA1	Mus musculus SFT2 domain containing 1 (Sft2d1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AA409698; MGC102361; 5630401J11Rik	AA409698; MGC102361; 5630401J11Rik
Mus musculus	RefSeq	ILMN_220848	ILMN_220848	NKX2-5	NM_008700.2	NM_008700.2		18091	76677926	NM_008700.2	Nkx2-5	NP_032726.1	ILMN_2727695	001980056	S	1053	CGCCAACAGCAACTTCGTGAACTTTGGCGTCGGGGACTTGAACACCGTGC	17	-	26976031-26976080	17qA3.3	Mus musculus NK2 transcription factor related, locus 5 (Drosophila) (Nkx2-5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Nkx2.5; Csx; Nkx-2.5; tinman	Nkx2.5; Csx; Nkx-2.5; tinman
Mus musculus	RefSeq	ILMN_207381	ILMN_323422	LOC100040238	XM_001474333.1	XM_001474333.1		100040238	149254846	XM_001474333.1	LOC100040238	XP_001474383.1	ILMN_1224673	007050427	S	814	ACTGGGACAACGACTCCGCCAAGGCTGGACGAGGCAGCTGGACCTGTCCT	6	+	8899136-8899185	6qA1	PREDICTED: Mus musculus hypothetical protein LOC100040238 (LOC100040238), mRNA.					
Mus musculus	RefSeq	ILMN_199962	ILMN_199962	LOC384112	XM_357434.1	XM_357434.1			38079239	XM_357434.1	LOC384112		ILMN_1212862	002630458	S	122	GGCATTGCCTGAATTTGGAAATGTCACAGGTGGGACTGATCTGGCTGGAC										
Mus musculus	Riken	ILMN_205146	ILMN_205146	PR	ri|9930019P03|PX00119M10|AK036862|3900					AK036862	PR		ILMN_2570332	005890576	S	3319	ACTACCCAGCTTTTCATTTGCTTTACTGTAGCTGACAGGCCTTGGACAGG										
Mus musculus	RefSeq	ILMN_199543	ILMN_199543	LOC383614	XM_357155.1	XM_357155.1			38074132	XM_357155.1	LOC383614		ILMN_1249298	001110368	S	209	CTGATGTTCCTAAAACCAGATTGTCTGAGTGCTCCCTGTCGTGGGTGCTC										
Mus musculus	RefSeq	ILMN_197829	ILMN_197829	LOC277707	XM_204076.2	XM_204076.2			38078685	XM_204076.2	LOC277707		ILMN_2529512	004290131	S	168	ACAGGTTGCTAAGCAGCTCCAAGAGGAAGACCTCACAGCCCAAACTCAGC										
Mus musculus	RefSeq	ILMN_217964	ILMN_217964	GSTT2	NM_010361.1	NM_010361.1		14872	6754087	NM_010361.1	Gstt2	NP_034491.1	ILMN_2689880	002490019	S	407	ATAGAATGGTCCTGGTTCTGCAACAGCTGGAGGACAAGTTCCTCAGGGAC	10	-	75295205-75295254	10qC1	Mus musculus glutathione S-transferase, theta 2 (Gstt2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence ISO]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence ISO]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Yrs; AI266894; mGSTT2	Yrs; AI266894; mGSTT2
Mus musculus	RefSeq	ILMN_222947	ILMN_222947	PRC1	NM_145150.1	NM_145150.1		233406	21553110	NM_145150.1	Prc1	NP_660132.1	ILMN_2757125	000780475	S	2762	CGTCCACAATGAGGCTCTCCAAACCCATCACTACTCTTCCCCAAAGCACT	7	+	87460957-87461006	7qD3	Mus musculus protein regulator of cytokinesis 1 (Prc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence ISO]		D7Ertd348e; MGC6745	D7Ertd348e; MGC6745
Mus musculus	Riken	ILMN_202304	ILMN_202304	PIGM	ri|4933437L05|PX00021O04|AK017103|1822					AK017103	Pigm		ILMN_1214465	004560608	S	1599	GAAATCCCGGAGTGGCTGAGATGTCGTGGACCTGGGACCTGGGTGAACTT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 30] [evidence ISO]		
Mus musculus	MEEBO	ILMN_194542	ILMN_194542	1810028F09RIK	scl45607.1.771_75						1810028F09Rik		ILMN_1221829	001780670	S	1	CAACAGACTGTATGTGGTAACTATTCCTTCACGTCCCAACATCAGATGGG										
Mus musculus	RefSeq	ILMN_219165	ILMN_219165	SUGT1	NM_026474.5	NM_026474.5		67955	153791252	NM_026474.5	Sugt1	NP_080750.1	ILMN_1229259	000580152	S	1083	GTCTGATGTAGGTAAAAGGAAAGTTGAAATCAACCCTCCCGATGATATGG				14qD3	Mus musculus SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) (Sugt1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2410174K12Rik; SGT1	2410174K12Rik; SGT1
Mus musculus	MEEBO	ILMN_216788	ILMN_216788	COL10A1	scl39030.3_572	NM_009925.1			6753479	NM_009925.1	Col10a1		ILMN_2675388	001780671	S	1822	CTCACGTTTGGGTAGGCCTGTATAAGAACGGCACGCCTACGATGTACACG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210370	ILMN_210370	4932442L08RIK	scl54037.6.1_68	XM_135972.1			20984689	XM_135972.1	4932442L08Rik		ILMN_1235800	005820630	S	2610	CAGCTGTCACTCTCATGAAGTAACCAGCCCTAACAGTTCCTGCTGTTGCC										
Mus musculus	RefSeq	ILMN_200948	ILMN_310283	LOC100039751	XR_031048.1	XR_031048.1		100039751	149272162	XR_031048.1	LOC100039751		ILMN_2540574	006020369	S	329	ATGGGTAGGCCTCTGTAAAATCGATCGTGAGGGCAAACCACGGAAGGTGG	X	+	120398916-120398965	XqE3	PREDICTED: Mus musculus similar to 40S ribosomal protein S12 (LOC100039751), misc RNA.					
Mus musculus	RefSeq	ILMN_214414	ILMN_214414	OLFR1469	NM_146695.1	NM_146695.1		258690	33239145	NM_146695.1	Olfr1469	NP_666906.1	ILMN_1215828	001940441	S	697	GGATATCGAAAGGCTATATCCACTTGTGCCTCACACTTCATTGCGGTATC	19	+	13485757-13485806	19qA	Mus musculus olfactory receptor 1469 (Olfr1469), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR202-11	MOR202-11
Mus musculus	RefSeq	ILMN_229452	ILMN_229452	OLFR316	NM_001011818.2	NM_001011818.2		258064	113374163	NM_001011818.2	Olfr316	NP_001011818.2	ILMN_2955981	004260575	S	224	CCACCACTGTGCCCAAGATGGCAGCTAACTTCCTCTCAGACACCAAGGCC	11	+	58562894-58562943	11qB1.3	Mus musculus olfactory receptor 316 (Olfr316), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR285-6_p; MOR285-3P	MOR285-6_p; MOR285-3P
Mus musculus	RefSeq	ILMN_220164	ILMN_252667	RAB26	XM_283428.6	XM_283428.6		328778	149268664	XM_283428.6	Rab26	XP_283428.6	ILMN_2718406	006760209	S	1441	GATAGAACCCAGTCACAACTTAGCAGGCTGGCCCAGTCCGTTCCACTTTG	17	-	24666083-24666132	17qA3.3	PREDICTED: Mus musculus RAB26, member RAS oncogene family, transcript variant 1 (Rab26), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220164	ILMN_252667	RAB26	XM_283428.6	XM_283428.6		328778	149268664	XM_283428.6	Rab26	XP_283428.6	ILMN_2722058	006770037	S	559	TGCGCTTCAAGGATGGGGCTTTCCTGGCTGGTACCTTCATCTCCACTGTG	17	-	24669171-24669220	17qA3.3	PREDICTED: Mus musculus RAB26, member RAS oncogene family, transcript variant 1 (Rab26), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_224171	ILMN_246673	BAAT	NM_007519.2	NM_007519.2		12012	110225338	NM_007519.2	Baat	NP_031545.2	ILMN_1259009	002510674	S	1662	CATGCAGTGAGAGCCCTATATCTACATGAATAAAATCGTAGGCCTTTCCT	4	-	49502448-49502497	4qB1	Mus musculus bile acid-Coenzyme A: amino acid N-acyltransferase (Baat), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IDA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acyl group to a nitrogen atom on the acceptor molecule [goid 16410] [evidence IDA]; Catalysis of the transfer of an acyl group to a nitrogen atom on the acceptor molecule [goid 16410] [evidence ISA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]; Catalysis of the reaction: choloyl-CoA + glycine = CoA + glycocholate [goid 47963] [evidence IEA]	AI158864; AI118337; BAT	AI158864; AI118337; BAT
Mus musculus	RefSeq	ILMN_211984	ILMN_211984	ADH7	NM_009626.3	NM_009626.3		11529	133892676	NM_009626.3	Adh7	NP_033756.2	ILMN_2621448	000620241	S	1395	CTGGCAAACCTTTATCTGCTTAGTTTACCGAGTGCCTAGGCTTCGCAGAG	3	+	137894309-137894358	3qG3	Mus musculus alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide (Adh7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation [goid 6068] [evidence IMP]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence TAS]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence TAS]	Adh3-t; Adh-3t; Adh-3e; Adt-1; Adh4; AI325182; Adh3-e; Adh3; Adh-3	Adh3-t; Adh-3t; Adh-3e; Adt-1; Adh4; AI325182; Adh3-e; Adh3; Adh-3
Mus musculus	RefSeq	ILMN_201990	ILMN_211984	ADH7	NM_009626.3	NM_009626.3		11529	133892676	NM_009626.3	Adh7	NP_033756.2	ILMN_1238226	003370307	S	265	CCTGTGGCCAAAATCTTAACACGGACTTCCTTAGCCTTTGGTGGGGCCAC	3	+	137885939-137885988	3qG3	Mus musculus alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide (Adh7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation [goid 6068] [evidence IMP]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence TAS]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence TAS]	Adh3-t; Adh-3t; Adh-3e; Adt-1; Adh4; AI325182; Adh3-e; Adh3; Adh-3	Adh3-t; Adh-3t; Adh-3e; Adt-1; Adh4; AI325182; Adh3-e; Adh3; Adh-3
Mus musculus	RefSeq	ILMN_221634	ILMN_221634	CYP4F15	NM_134127.1	NM_134127.1		106648	20373164	NM_134127.1	Cyp4f15	NP_598888.1	ILMN_2906226	006040392	S	1871	GCTGGGGTTAGCATCCTTTGGCCCAGATCCCTGACTTCATTGGCCTCTAC	17	+	32840032-32840081	17qB1	Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 15 (Cyp4f15), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AI787289; Cyp4f-15	AI787289; Cyp4f-15
Mus musculus	Riken	ILMN_206644	ILMN_206644	4930507H06RIK	ri|4930507H06|PX00314G03|AK076846|865					AK076846	4930507H06Rik		ILMN_2581617	006940100	S	67	TTTAACTCCATTGCTGTTCCCCGCGGGCAGGTCCAGGGGTCTGGTTCACT										
Mus musculus	Riken	ILMN_206684	ILMN_206684	NUCB	ri|B230337F23|PX00316P10|AK080831|2763					AK080831	Nucb		ILMN_2581928	000150521	S	2507	TGCAGAGGGCCAGGTGGAATCTTCTTTAAAGTTCAAGGGCCCAGCCTGGT										
Mus musculus	RefSeq	ILMN_221979	ILMN_221979	SLC4A8	NM_021530.2	NM_021530.2		59033	111494231	NM_021530.2	Slc4a8	NP_067505.2	ILMN_1213975	004210239	S	3705	CTTCCTTCTCTCTCTTCAGAGCTGCCATCATTAAAGAGCCAGCTTCCATT	15	+	100646314-100646363	15qF1	Mus musculus solute carrier family 4 (anion exchanger), member 8 (Slc4a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA];  [goid 15380] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 5452] [evidence IEA]	C230026C11; kNBC-3; AW493845	C230026C11; kNBC-3; AW493845
Mus musculus	RefSeq	ILMN_221979	ILMN_221979	SLC4A8	NM_021530.2	NM_021530.2		59033	111494231	NM_021530.2	Slc4a8	NP_067505.2	ILMN_2742937	004830273	S	3043	ACGCTAGTGCAGCTCACCTGCCTCGTCCTGCTCTGGGTCATCAAGGCATC	15	+	100641121-100641170	15qF1	Mus musculus solute carrier family 4 (anion exchanger), member 8 (Slc4a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA];  [goid 15380] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 5452] [evidence IEA]	C230026C11; kNBC-3; AW493845	C230026C11; kNBC-3; AW493845
Mus musculus	RefSeq	ILMN_195283	ILMN_221979	SLC4A8	NM_021530.2	NM_021530.2		59033	111494231	NM_021530.2	Slc4a8	NP_067505.2	ILMN_2514202	002140243	S	11651	GATCACCCTGTAACAATGTATGGTAGACATGAGGCCCCGGGGCAGGTGAC	15	+	100654260-100654309	15qF1	Mus musculus solute carrier family 4 (anion exchanger), member 8 (Slc4a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA];  [goid 15380] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 5452] [evidence IEA]	C230026C11; kNBC-3; AW493845	C230026C11; kNBC-3; AW493845
Mus musculus	RefSeq	ILMN_194259	ILMN_254810	CEBPZ	NM_001024806.2	NM_001024806.2		12607	95006993	NM_001024806.2	Cebpz	NP_001019977.1	ILMN_1213477	000010762	S	3301	CAGTCTGGAATGTATGGAGTTAGAGAGAAAGATGAGGAAAAATGGTTGAC	17	-	79319069-79319118	17qE3	Mus musculus CCAAT/enhancer binding protein zeta (Cebpz), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AI848081; Cebpa-rs1; CBF2; Cbf; MGC36087	AI848081; Cebpa-rs1; CBF2; Cbf; MGC36087
Mus musculus	RefSeq	ILMN_198183	ILMN_198183	EG210562	XM_140033.6	XM_140033.6		210562	94401997	XM_140033.6	EG210562	XP_140033.3	ILMN_1256808	005270202	S	855	CAAGTCAAGGTGTCCACCGCAGGTGCCCCCGAGAACAGGAAGACAGCCAA	17	-	45300254-45300303	17qB3	PREDICTED: Mus musculus predicted gene, EG210562 (EG210562), mRNA.					
Mus musculus	RefSeq	ILMN_198343	ILMN_198343	LOC381177	XM_355101.1	XM_355101.1			38084057	XM_355101.1	LOC381177		ILMN_2531352	006860754	S	811	CAGGATAAAGCATGCGCTCTTTGCGGGGTGGCGTATAGAACTCTCCGCGA										
Mus musculus	RefSeq	ILMN_218425	ILMN_218425	ADCY2	NM_153534.2	NM_153534.2		210044	124244091	NM_153534.2	Adcy2	NP_705762.2	ILMN_2883063	001740541	S	4023	GCTGAGACTCGCGGCTTTTGTCACCTTGCTGTGTTGTCTTGTGGCAGCAG	13	-	68759058-68759107	13qB3	Mus musculus adenylate cyclase 2 (Adcy2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence TAS]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC47193; mKIAA1060	MGC47193; mKIAA1060
Mus musculus	RefSeq	ILMN_232098	ILMN_232098	GM1698	NM_001033467.1	NM_001033467.1		382003	85701996	NM_001033467.1	Gm1698	NP_001028639.1	ILMN_2916173	006330246	S	2087	GTCTCTCCCATGGATGCAGGACTCAATGTGGCAGTCTTGATATGTCCCAG	8	+	28730698-28730747	8qA2	Mus musculus gene model 1698, (NCBI) (Gm1698), mRNA.					
Mus musculus	MEEBO	ILMN_189722	ILMN_189722	IGHV1S134_AF304554_IG_HEAVY_VARIABLE_1S134_123	IGHV1S134_AF304554_Ig_heavy_variable_1S134_123						IGHV1S134_AF304554_Ig_heavy_variable_1S134_123		ILMN_1238943	003850445	S	20	TTGGATATATTTATCCTGGAAATGGTTATACTGTGTACAATGAGAAGTTC										
Mus musculus	MEEBO	ILMN_186906	ILMN_186906	2900006A08RIK	scl27332.1.1_317						2900006A08Rik		ILMN_2439505	007000300	S	6	CCCCCTATCTGTGGTCATAAATATTGCATTATCCATCCTTTCAAACTGTG										
Mus musculus	RefSeq	ILMN_253945	ILMN_253945	GRK4	NM_001080743.1	NM_001080743.1		14772	124001565	NM_001080743.1	Grk4	NP_001074212.1	ILMN_3022943	000650692	I	3145	CATGGATTCCACTGGCCAATTTGGAAGACTACAAAGGGTTCTTAAGTTGC	5	+	35043642-35043691	5qB2	Mus musculus G protein-coupled receptor kinase 4 (Grk4), transcript variant 2, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Gprk4; Gprk2l; A830025H08Rik; Grk4; GRK	Gprk4; Gprk2l; A830025H08Rik; Grk4; GRK
Mus musculus	RefSeq	ILMN_253945	ILMN_253945	GRK4	NM_001080743.1	NM_001080743.1		14772	124001565	NM_001080743.1	Grk4	NP_001074212.1	ILMN_3095328	000630497	A	554	CGACGGCGCAGGACAGCGATCATGGAACTCGAGAACTTCGTGGCCAACAA	5	+	35003581-35003601:35003602-35003630	5qB2	Mus musculus G protein-coupled receptor kinase 4 (Grk4), transcript variant 2, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Gprk4; Gprk2l; A830025H08Rik; Grk4; GRK	Gprk4; Gprk2l; A830025H08Rik; Grk4; GRK
Mus musculus	Riken	ILMN_205790	ILMN_205790	D230029K13RIK	ri|D230029K13|PX00189N05|AK051976|2626					AK051976	D230029K13Rik		ILMN_1256331	001260086	S	2259	CTCCCCCCTCATCCCCCCCAAGACAAGGTTTCACTTTGTAGCCGGATATC										
Mus musculus	RefSeq	ILMN_210090	ILMN_210090	SNX3	NM_017472.3	NM_017472.3		54198	142359771	NM_017472.3	Snx3	NP_059500.2	ILMN_2602128	000870491	S	485	CTGAAGGAATCTACTGTTAGAAGAAGATACAGTGACTTTGAGTGGCTTCG	10	+	42245780-42245829	10qB2	Mus musculus sorting nexin 3 (Snx3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC151266; SDP3; MGC151262	MGC151266; SDP3; MGC151262
Mus musculus	RefSeq	ILMN_210090	ILMN_210090	SNX3	NM_017472.3	NM_017472.3		54198	142359771	NM_017472.3	Snx3	NP_059500.2	ILMN_1241268	001690528	S	807	CAAAACCCGAGACCATTAATGATTCATCCGCACCAATGAAGAAGTTGTAA	10	+	42254580-42254629	10qB2	Mus musculus sorting nexin 3 (Snx3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC151266; SDP3; MGC151262	MGC151266; SDP3; MGC151262
Mus musculus	MEEBO	ILMN_184635	ILMN_184635	TMC3	scl00233424.1_76				46852155	NM_177695	Tmc3		ILMN_2420267	002690553	S	20	AGTCCACCTAGCAAACATTATGAGTGTGGATTTTGGGGGGTTGTGGCTTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_199852	ILMN_199852	LOC384000	XM_357367.1	XM_357367.1			38078123	XM_357367.1	LOC384000		ILMN_1216618	004480382	S	579	CAGGCAGCAGACTGATTCGGCATCCATGTACAGGCCTCCCCACAGGGTCG										
Mus musculus	MEEBO	ILMN_218869	ILMN_218869	MGC7717	scl0216951.2_8	NM_146022.1			22122490	NM_146022.1	MGC7717		ILMN_2701249	001400598	S	1812	GCTGGGACACACAGTTCAGCAACAACTGACATATGGTCTCTATAGATGTG										
Mus musculus	RefSeq	ILMN_196923	ILMN_196923	LOC271709	XM_194688.1	XM_194688.1			25047501	XM_194688.1	LOC271709		ILMN_1242652	000460035	S	161	AGATCACCAGCATCGAGCACAACCGGGACCTCTCCTTCCTGCGGGAGCAT										
Mus musculus	RefSeq	ILMN_227099	ILMN_227099	EG623661	NM_001037918.1	NM_001037918.1		623661	85702309	NM_001037918.1	EG623661	NP_001033007.1	ILMN_2993944	006590278	S	2408	GCCAATGACTGGGCAGAGGAGATAGGAAGGCTGAGCTACTGATGGCGGTG	1	+	37821697-37821746	1qB	Mus musculus predicted gene, EG623661 (EG623661), mRNA.				MGC28431	MGC28431
Mus musculus	RefSeq	ILMN_220805	ILMN_321854	LOC100046120	XM_001475611.1	XM_001475611.1		100046120	149266011	XM_001475611.1	LOC100046120	XP_001475661.1	ILMN_2727153	001300747	S	1418	AGACCCCTAGAGAACTCCACATGTCTCCAGGCGAGTAGGCCTCACCCAAG					PREDICTED: Mus musculus similar to clusterin (LOC100046120), mRNA.					
Mus musculus	RefSeq	ILMN_253696	ILMN_253696	ATP8B4	NM_001080944.1	NM_001080944.1		241633	124301185	NM_001080944.1	Atp8b4	NP_001074413.1	ILMN_2854054	001740373	S	1242	TCCCCTTTGTTGGAAATGCACGGCACTCCCTGAGCCAGAAGTTTGTCTGG				2qF1	Mus musculus ATPase, class I, type 8B, member 4 (Atp8b4), mRNA. XM_901491 XM_901499 XM_925437 XM_925438 XM_925440 XM_985405	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A530043E15; Im; MGC161341	A530043E15; Im; MGC161341
Mus musculus	Riken	ILMN_203488	ILMN_203488	VDAC3	ri|B230105H23|PX00068A20|AK045358|4174					AK045358	Vdac3		ILMN_2557681	005570300	S	3516	TCGCAGCCTCCTGAGTATCTTGGACTCTAGGGACATGCCACCATAACCAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Catalysis of the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion [goid 8308] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184565	ILMN_256278	NME5	NM_080637.3	NM_080637.3		75533	142359743	NM_080637.3	Nme5	NP_542368.2	ILMN_2696232	001170121	S	609	GCCAACCCTACTTCAAGGACTCACAGAGCTTTGTAAGGAAAAGCCACCAG	18	-	34726697-34726746	18qB1	Mus musculus non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase) (Nme5), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a spermatid cell [goid 48515] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	1700019D05Rik	1700019D05Rik
Mus musculus	MEEBO	ILMN_190915	ILMN_190915	VKORC1L1	scl0069568.1_1030	NM_027121.2			46391091	NM_027121.2	Vkorc1l1		ILMN_1216546	007330139	S	11	GGTAGAAACATTGGATCCACCCCTGCAGAACTTACTGTACAGTTTAGTTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals. Vitamin K substances share a methylated naphthoquinone ring structure and vary in the aliphatic side chains attached to the molecule [goid 42373] [evidence ISO]			
Mus musculus	Riken	ILMN_204395	ILMN_204395	SIN3A	ri|A130020A06|PX00121I23|AK037457|1936					AK037457	Sin3a		ILMN_2564650	005890044	S	1774	GCTTAGACTGTCAGCTTTATGCATGGGGTAGATGGCTGGCTTCAAGGCCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_198568	ILMN_244888	LOC232974	XM_989499.1	XM_989499.1		232974	94381842	XM_989499.1	LOC232974	XP_994593.1	ILMN_2532149	000460538	S	999	TGGTCCATTGTCCCCCAAGACCAATTCAGGCAAAGGGGGGAACGGCAGCT				7qA3	PREDICTED: Mus musculus similar to ETS domain-containing transcription factor ERF (Ets2 repressor factor) (LOC232974), mRNA.					
Mus musculus	RefSeq	ILMN_187671	ILMN_187671	ZFP454	NM_172794.2	NM_172794.2		237758	31982551	NM_172794.2	Zfp454	NP_766382.2	ILMN_1247155	002710397	S	10	GGCATCACACTGGAGGAAAGTGATAGAAAGGCAGTTAATAGGTGCTGAGG	11	-	50700886-50700935	11qB1.3	Mus musculus zinc finger protein 454 (Zfp454), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	B230342N19; MGC57560	B230342N19; MGC57560
Mus musculus	RefSeq	ILMN_210290	ILMN_210290	PPP2R3C	NM_021529.3	NM_021529.3		59032	109809755	NM_021529.3	Ppp2r3c	NP_067504.2	ILMN_2947369	001050253	S	776	TGCTGGCCAAGGATACCTTCGGGAATCAGACCTGGAGAACTACATCCTGG	12	-	56390757-56390779:56393491-56393517	12qC1	Mus musculus protein phosphatase 2, regulatory subunit B'', gamma (Ppp2r3c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	G5pr; G4-1; 5730412A08Rik; 4930511A21Rik	G5pr; G4-1; 5730412A08Rik; 4930511A21Rik
Mus musculus	RefSeq	ILMN_210290	ILMN_210290	PPP2R3C	NM_021529.3	NM_021529.3		59032	109809755	NM_021529.3	Ppp2r3c	NP_067504.2	ILMN_1215679	005910100	S	355	GGAAAGGAGGTAGAAAAAACACAAACGAGTTCTATAAGACCATACCCCGG	12	-	56399892-56399941	12qC1	Mus musculus protein phosphatase 2, regulatory subunit B'', gamma (Ppp2r3c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	G5pr; G4-1; 5730412A08Rik; 4930511A21Rik	G5pr; G4-1; 5730412A08Rik; 4930511A21Rik
Mus musculus	RefSeq	ILMN_222588	ILMN_222588	HESX1	NM_010420.1	NM_010420.1		15209	6754183	NM_010420.1	Hesx1	NP_034550.1	ILMN_2751927	004390494	S	832	GCCGAGCAAAGATGAAAAGGTCCCGTAGAGAATCACAGTTTCTAATGGCG	14	+	27815206-27815255	14qA3	Mus musculus homeo box gene expressed in ES cells (Hesx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the forebrain are generated and organized. Morphogenesis pertains to the creation of form. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 48853] [evidence IMP]; The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity) [goid 43584] [evidence IMP]; The process resulting in the transition of the otic placode into the otic vesicle, a transient embryonic structure formed during development of the vertebrate inner ear [goid 30916] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	HES-1; Rpx	HES-1; Rpx
Mus musculus	MEEBO	ILMN_214531	ILMN_214531	MTMR13	scl0319934.1_56	NM_178769.2			31343464	NM_178769.2	Mtmr13		ILMN_2648965	002810577	S	2388	GGCACTATATTTTTCCATAATGACTCATACTAAAGTTCTTTAGCACTAGA										
Mus musculus	MEEBO	ILMN_187756	ILMN_187756	4932442E05RIK	scl5639.2.1_287						4932442E05Rik		ILMN_1220614	000010470	S	1	GCCGCCATCCAGATCGATACTCTACGACTCGAGAGCCACATGAAGGATAA								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208796	ILMN_208796	PTRH1	NM_178595.2	NM_178595.2		329384	31340649	NM_178595.2	Ptrh1	NP_848710.1	ILMN_2812645	002260050	S	472	GCGCCCCACACACCCTAATATGGTGGAGAACCATGTCCTGGGCTGTTTCT	2	+	32599161-32599210	2qB	Mus musculus peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) (Ptrh1), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA [goid 4045] [evidence IEA]	AW046744; 2210013M04Rik	AW046744; 2210013M04Rik
Mus musculus	RefSeq	ILMN_201122	ILMN_201122	LOC384835	XM_357888.1	XM_357888.1			38089292	XM_357888.1	LOC384835		ILMN_1245851	001230750	S	391	CATCCACACCCAGGTTCCACTGAAAGATCTACAACTGAACACCCACTCCC										
Mus musculus	MEEBO	ILMN_195564	ILMN_195564	A130028J20RIK	scl54771.1.1285_39						A130028J20Rik		ILMN_2516710	001940070	S	3	GCCAACCTGAGGTGAGTGAAAATATAACCCTTCCCGTTTTGTCCGCCTCT										
Mus musculus	Riken	ILMN_206789	ILMN_206789	B230312E02RIK	ri|B230312E02|PX00316N12|AK080817|2545					AK080817	B230312E02Rik		ILMN_2582706	000380082	S	2282	GCTGTCGCTGTCCACTGTGGCTGTACTTCTTGACCATGTTAAAATGCCCC										
Mus musculus	RefSeq	ILMN_220993	ILMN_220993	SCNN1A	NM_011324.1	NM_011324.1		20276	33859617	NM_011324.1	Scnn1a	NP_035454.1	ILMN_2729607	003990543	S	2648	TCTCTTTCATTTGGTACCCTGTACCCCAGTGCCTCTGCGTCGCCTCCTTC	6	+	125294623-125294672	6qF3	Mus musculus sodium channel, nonvoltage-gated 1 alpha (Scnn1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 15280] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	mENaC; Scnn1	mENaC; Scnn1
Mus musculus	RefSeq	ILMN_247940	ILMN_247940	4931433A01RIK	NM_030231.1	NM_030231.1		78933	114796653	NM_030231.1	4931433A01Rik	NP_084507.1	ILMN_3081260	006840220	A	1396	CGGCTGAACTCCCTGGTTGAGAAGATAGCAGTCCCCATGCCAAGACTTCG					Mus musculus RIKEN cDNA 4931433A01 gene (4931433A01Rik), transcript variant 1, mRNA.				4930578N11Rik	4930578N11Rik
Mus musculus	RefSeq	ILMN_200820	ILMN_200820	LOC385360	XM_358206.1	XM_358206.1			38086359	XM_358206.1	LOC385360		ILMN_2540124	007040626	S	60	TGAGCTTCCTGCTGTTGGTGAGGCATCAAACCTTGGTAGAAGCCTTTCTA										
Mus musculus	MEEBO	ILMN_189171	ILMN_189171	2900079J23RIK	scl44107.1.1_51						2900079J23Rik		ILMN_2458967	006900327	S	20	AATTGAGGTCAGACCCTACAGTACTTATCCCCGCAAGACACAGAGGCTAG										
Mus musculus	RefSeq	ILMN_217966	ILMN_217966	SYNC	NM_023485.3	NM_023485.3		68828	47059477	NM_023485.3	Sync	NP_075974.3	ILMN_2982123	001470543	S	1467	AACAGGCTGATGCACCCACTTCTCAGGCAGGTGGAGTCGAGGCACAATCC	4	+	128983895-128983944	4qD2.2	Mus musculus syncoilin (Sync), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence ISS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins [goid 45103] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110057H03Rik; MGC124230; SNIP4	1110057H03Rik; MGC124230; SNIP4
Mus musculus	Riken	ILMN_204421	ILMN_204421	A230085B16RIK	ri|A230085B16|PX00130I08|AK039012|1857					AK039012	A230085B16Rik		ILMN_1257056	002120139	S	1703	TGTGGCAGCAGACAGACAAGCAGACAGGCAGATAGGCATACAGGCATGGC										
Mus musculus	Riken	ILMN_204182	ILMN_204182	A830044N05RIK	ri|A830044N05|PX00155N19|AK043876|3119					AK043876	A830044N05Rik		ILMN_1240977	004220014	S	2840	CCTCACAATAGGTTCCATCCCTATGCAATACCCAGAGGCCGTGAGCTTCC										
Mus musculus	RefSeq	ILMN_201131	ILMN_201131	LOC384839	XM_357894.1	XM_357894.1			38089319	XM_357894.1	LOC384839		ILMN_1245735	001230333	S	13	GAGAGCAGGAACTATGATGGGCTACCCTTGACTGAGAAGATCTCCCACTG										
Mus musculus	MEEBO	ILMN_218503	ILMN_218503	BC062185	scl0215112.1_156	NM_199147.1			40254801	NM_199147.1	BC062185		ILMN_1229566	002760468	S	2716	GCGAGCTCCGGAAGGCCAGCTGTAGCCCTGTCACATCTGCAATGGCATCA										
Mus musculus	RefSeq	ILMN_257648	ILMN_257648	6330545A04RIK	NM_001081174.1	NM_001081174.1		76166	124487178	NM_001081174.1	6330545A04Rik	NP_001074643.1	ILMN_3137189	007040437	A	831	CATGTGCTCAATGGCCTTGCAGAACAGTTGTGGCACCAGGACCAGGTGGC	4	+	140775909-140775958	4qD3	Mus musculus RIKEN cDNA 6330545A04 gene (6330545A04Rik), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	RP23-18M1.2; Gm723	RP23-18M1.2; Gm723
Mus musculus	RefSeq	ILMN_223325	ILMN_319704	LOC100048396	XR_034680.1	XR_034680.1		100048396	149259395	XR_034680.1	LOC100048396		ILMN_2762538	005900086	S	816	GGCTAATCGAGTGACTATGATGATGAAAATATTTGAAAACCAGACAGCTA					PREDICTED: Mus musculus hypothetical protein LOC100048396 (LOC100048396), misc RNA.					
Mus musculus	RefSeq	ILMN_209498	ILMN_243223	OLFR61	NM_146964.1	NM_146964.1		18362	22203810	NM_146964.1	Olfr61	NP_667175.1	ILMN_2596379	002000253	S	50	GGTTTTCAGAACATGCTACTCTAAGACTTCTCCTGACAGGCTGCTTCCTG	7	+	147823651-147823700	7qF5	Mus musculus olfactory receptor 61 (Olfr61), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	IH7; MOR253-1	IH7; MOR253-1
Mus musculus	RefSeq	ILMN_238876	ILMN_238876	FBXL10	NM_001003953.1	NM_001003953.1		30841	54607021	NM_001003953.1	Fbxl10	NP_001003953.1	ILMN_3069800	006900170	I	121	CCTCCTTTCCCCCTCCGCCAAAATGCAGGGGGCAGGAGTGTTGACAATTA	5	-	123438931-123438980	5qF	Mus musculus F-box and leucine-rich repeat protein 10 (Fbxl10), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2
Mus musculus	RefSeq	ILMN_185983	ILMN_238876	FBXL10	NM_001003953.1	NM_001003953.1		30841	54607021	NM_001003953.1	Fbxl10	NP_001003953.1	ILMN_2431638	003940241	S	1158	GTTCCGTTACCCCTTCTACTATGAGATGTGCTGGTATGTCTTGGAGAGAT	5	-	123384807-123384856	5qF	Mus musculus F-box and leucine-rich repeat protein 10 (Fbxl10), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2	E430001G17; KIAA3014; Fbl10; mKIAA3014; PCCX2; Cxxc2
Mus musculus	MEEBO	ILMN_223532	ILMN_223532	MYL6	scl017904.3_16				34916052	NM_010860	Myl6		ILMN_2775660	000450523	S	138	AACCCTACCAACGCCGAGGTGCTCAAGGTCCTAGGGAACCCCAAGAGTGA						A portmanteau term for myosins other than myosin II [goid 16461] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated [goid 30049] [evidence TAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence TAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence TAS]		
Mus musculus	RefSeq	ILMN_186814	ILMN_186814	VSNL1	NM_012038.3	NM_012038.3		26950	67514555	NM_012038.3	Vsnl1	NP_036168.1	ILMN_2438724	002760646	S	1735	GTGGGGAAAGTCACTGTCCAACTTATCATCCAGCCCCTCCTTCCCCAAAG	12	-	11332166-11332215	12qA1.1	Mus musculus visinin-like 1 (Vsnl1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Vnsl1; VILIP	Vnsl1; VILIP
Mus musculus	MEEBO	ILMN_192043	ILMN_192043	PTPRK	scl019272.9_136				6679560	NM_008983	Ptprk		ILMN_2606736	001740561	S	3856	AAGGCCAGTCAGCCTCTTGGGATGTGGCTAAAAAGGATCAAAACAGAGCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224284	ILMN_234776	ORAI1	NM_175423.3	NM_175423.3		109305	93277106	NM_175423.3	Orai1	NP_780632.1	ILMN_1236368	001340465	S	1384	TGCACCAGTGCCACCCGGATGCTTCCTGTCCTGCCCTCAAACTCCTTACT	5	+	123479974-123480023	5qF	Mus musculus ORAI calcium release-activated calcium modulator 1 (Orai1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	orai-1; D730049H07Rik; Orai1	orai-1; D730049H07Rik; Orai1
Mus musculus	RefSeq	ILMN_209868	ILMN_209868	CASQ1	NM_009813.1	NM_009813.1		12372	6753289	NM_009813.1	Casq1	NP_033943.1	ILMN_2773330	001050039	S	370	TCTACCATGAGCCCCCCGAGGACGACAAGGCCTCGCAGAGACAATTTGAG	1	-	174149551-174149600	1qH3	Mus musculus calsequestrin 1 (Casq1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence TAS]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; The volume enclosed by the membranes of the sarcoplasmic reticulum [goid 33018] [evidence IDA]	Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CSQ1; CSQ-1; CSQ	CSQ1; CSQ-1; CSQ
Mus musculus	RefSeq	ILMN_218897	ILMN_218897	STRBP	NM_009261.2	NM_009261.2		20744	114842376	NM_009261.2	Strbp	NP_033287.2	ILMN_2857114	002650278	S	2643	CACAGAGTACTGCCTGGTTCCTGATGCAGTCACTGATTGGTAGCTGAGTG	2	-	37439043-37439092	2qB	Mus musculus spermatid perinuclear RNA binding protein (Strbp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	Behavior that is dependent upon the sensation of a mechanical stimulus [goid 7638] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]; Interacting selectively with single-stranded RNA [goid 3727] [evidence IDA]	C86322; Spnr	C86322; Spnr
Mus musculus	RefSeq	ILMN_221938	ILMN_221938	TBC1D22B	NM_198647.1	NM_198647.1		381085	38348531	NM_198647.1	Tbc1d22b	NP_941049.1	ILMN_1215134	003830482	S	2804	TTATAGCGTGCATCGACACGTGAAAGCGAGCTAGGTCATCAGCACAGATG	17	+	29743066-29743115	17qA3.3	Mus musculus TBC1 domain family, member 22B (Tbc1d22b), mRNA.				MGC61359; BC045600; MGC31516	MGC61359; BC045600; MGC31516
Mus musculus	RefSeq	ILMN_218809	ILMN_218809	ANKRD13D	NM_026720.1	NM_026720.1		68423	39930418	NM_026720.1	Ankrd13d	NP_080996.1	ILMN_2851735	006840717	S	1803	GTCTTCAAGGGAACAGGAGGAGTTGGAGCGACGGGGTCAGCAGGAAGAAG	19	-	4270379-4270428	19qA	Mus musculus ankyrin repeat domain 13 family, member D (Ankrd13d), mRNA.				AI430801; 0710001P18Rik	AI430801; 0710001P18Rik
Mus musculus	RefSeq	ILMN_200733	ILMN_322261	LOC100042083	XM_001477536.1	XM_001477536.1		100042083	149256121	XM_001477536.1	LOC100042083	XP_001477586.1	ILMN_1217532	004810475	S	65	GGCGCATTAGTGACAACAAAAGGAAGCTGGGCCGGACTTTTGGCTTTGCA	7	+	9838165-9838214	7qA1	PREDICTED: Mus musculus similar to 2810047C21Rik protein (LOC100042083), mRNA.					
Mus musculus	RefSeq	ILMN_211156	ILMN_211156	PI15	NM_053191.1	NM_053191.1		94227	16716490	NM_053191.1	Pi15	NP_444421.1	ILMN_1260136	001170470	S	1276	GTGTGATATGACACATAGGTAATAATATGATGTGGTCGTTAACAGGGGAA	1	+	17615467-17615516	1qA3	Mus musculus peptidase inhibitor 15 (Pi15), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	P24TI; SugarCrisp; P25TI	P24TI; SugarCrisp; P25TI
Mus musculus	Riken	ILMN_204473	ILMN_204473	B130015M16RIK	ri|B130015M16|PX00157I04|AK044956|2746					AK044956	B130015M16Rik		ILMN_2565252	006510148	S	1986	CTAGACCTGCAGGTGAGCCAGGTGGCCTATACATAGGCTCCCCAATGCTG										
Mus musculus	RefSeq	ILMN_213784	ILMN_213784	CES1	NM_021456.2	NM_021456.2		12623	142370214	NM_021456.2	Ces1	NP_067431.1	ILMN_2640752	006480397	S	1807	CCAAAATCAATCGTCTGACACCAGTGGGACACAATAGGGAGAAACATTTG	8	-	95826685-95826734	8qC5	Mus musculus carboxylesterase 1 (Ces1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Ces-1; Ses-1	Ces-1; Ses-1
Mus musculus	Riken	ILMN_205594	ILMN_205594	CHM	ri|9630020M15|PX00115B17|AK035956|3397					AK035956	Chm		ILMN_2573753	000730086	S	2528	GCGTAAAATGTCTAGCTGGGATGCTGTCTCCTCCATTATCTTAGCAAGCC						A heterodimeric enzyme complex, which in mammals is composed of an alpha and a beta subunit, and which associates with an accessory protein Rep (Rab escort protein). Catalyzes of the transfer of a geranyl-geranyl moiety from geranylgeranyl pyrophosphate to a Rab protein [goid 5968] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213148	ILMN_213148	CLDN19	scl25029.4_472	NM_153105.3			31981954	NM_153105.3	Cldn19		ILMN_2634169	004390730	S	1423	CGATTTCTCTCTTTTGACTTGCAGACCTGTTGTTAAGTTGCCCGCCTCGG						A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence ISA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence ISA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A neurological process that causes the sequential depolarization of a neuron's cell membrane along an axon [goid 19227] [evidence IMP]; The formation of an apical junction, a functional unit located near the cell apex at the points of contact between epithelial cells composed of the tight junction, the zonula adherens junction and the desmosomes, by the aggregation, arrangement and bonding together of its constituents [goid 43297] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IMP]		
Mus musculus	RefSeq	ILMN_249842	ILMN_249842	OLFR1307	NM_001011787.1	NM_001011787.1		257956	58801341	NM_001011787.1	Olfr1307	NP_001011787.1	ILMN_3161714	005260594	S	689	CAGGTGGTTCCTCTAAAGCCCTGTCTACTCTTTCTGCTCACATCACTGTA	2	-	111784873-111784922	2qE3	Mus musculus olfactory receptor 1307 (Olfr1307), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR245-19P	MOR245-19P
Mus musculus	RefSeq	ILMN_241320	ILMN_241320	1700007G11RIK	NM_001024614.1	NM_001024614.1		75784	66841373	NM_001024614.1	1700007G11Rik	NP_001019785.1	ILMN_3003018	003310274	S	662	TCCAGGTGACAACTCCACCAGGATCCCCATCCAGACGGATCTCTACGCAC	5	+	99230839-99230888	5qE3	Mus musculus RIKEN cDNA 1700007G11 gene (1700007G11Rik), mRNA.				4930428O21Rik	4930428O21Rik
Mus musculus	MEEBO	ILMN_185600	ILMN_185600	ZFML	scl0001072.1_33				49904646	BC076615	Zfml		ILMN_2428397	003850564	S	11	TCACCCTCACAAAAAGTGGCAGAACCAACAAAAGGCGAAGAGGCCTTCCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210051	ILMN_210051	B230206H07RIK	NM_177280.2	NM_177280.2		320871	31343236	NM_177280.2	B230206H07Rik	NP_796254.1	ILMN_2981623	005310196	S	2543	GCACCATAGTGGGTGGTGCTTGGAGGAGTCGCTGGTGGTGTTTGTTTCTT	7	-	141210840-141210889	7qF5	Mus musculus RIKEN cDNA B230206H07 gene (B230206H07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220508	ILMN_249136	PLEKHM2	XM_924800.3	XM_924800.3		69582	149253213	XM_924800.3	Plekhm2	XP_929893.3	ILMN_1239535	000730148	S	4040	CCATGAGCGTGGTGGCTTCTTTGACATCTGACGACCAACCCCTGCTTGGC				4qE1	PREDICTED: Mus musculus pleckstrin homology domain containing, family M (with RUN domain) member 2, transcript variant 7 (Plekhm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Mus musculus	Riken	ILMN_203976	ILMN_203976	A530030B07RIK	ri|A530030B07|PX00140J07|AK040847|1177					AK040847	A530030B07Rik		ILMN_1222825	001450520	S	861	TCCGGGCAAGGCTGGAAAGGAGTCGTCATCTCAGGTGGAGGTCAAAGCTC										
Mus musculus	Riken	ILMN_206945	ILMN_206945	D630030E05RIK	ri|D630030E05|PX00197H17|AK085465|2542					AK085465	D630030E05Rik		ILMN_1236181	001190575	S	2464	CCACTGGGGTGCACAAAAAGATGAGAGGCAAACATGCTGTTGTAGGTGCC										
Mus musculus	RefSeq	ILMN_213442	ILMN_240399	PORCN	NM_145907.2	NM_145907.2		53627	142382779	NM_145907.2	Porcn	NP_665914.1	ILMN_2637090	006280575	S	1533	GGCTGAGGCATATGACCATCATAATCCCCTTCAATACCCCTCCTTAGGGT	X	-	7771253-7771301:7771302-7771302	XqA1.1	Mus musculus porcupine homolog (Drosophila) (Porcn), transcript variant Mporc-c, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The chemical reactions and pathways involving glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9100] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mporc; DXHXS7465e; porc; Ppn; Mporc-b; Mporc-a; Mporc-d; Mporc-c; 2410004O13Rik; mMg61; AW045557	Mporc; DXHXS7465e; porc; Ppn; Mporc-b; Mporc-a; Mporc-d; Mporc-c; 2410004O13Rik; mMg61; AW045557
Mus musculus	RefSeq	ILMN_198757	ILMN_235709	EG245516	XM_994395.1	XM_994395.1		245516	94407664	XM_994395.1	EG245516	XP_999489.1	ILMN_1244109	003120463	S	1836	CGTCCTTCCTCTAGCTCTCCAGCCTACTGCTAGGTCATCAGAAAACAAGC	X	+	91228243-91228292	XqC3	PREDICTED: Mus musculus predicted gene, EG245516 (EG245516), mRNA.					
Mus musculus	RefSeq	ILMN_198825	ILMN_198825	LOC232885	XM_145369.2	XM_145369.2			38088383	XM_145369.2	LOC232885		ILMN_1238616	005700367	S	783	CTTTTCCAGTGGTTTTCCTGTGGGAATGGCTAGAATGGGAAGGGCCATGC										
Mus musculus	Riken	ILMN_203492	ILMN_203492	B430320J11RIK	ri|B430320J11|PX00072D10|AK046714|2961					AK046714	B430320J11Rik		ILMN_1226766	002940025	S	2839	AACCAGAGAGCACCACAGATGAGGGCGACCGTGTGCAGTGTGGCAGCTTA										
Mus musculus	RefSeq	ILMN_220983	ILMN_256457	KIF2B	NM_028547.2	NM_028547.2		73470	142376593	NM_028547.2	Kif2b	NP_082823.1	ILMN_2729487	001190341	S	1941	GGTGGGAGGCCATCCAAGAAACGGCTGAGGGAGTCAACGGTGATGTGGAT	11	-	91436879-91436928	11qD	Mus musculus kinesin family member 2B (Kif2b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	1700063D03Rik; MGC118316	1700063D03Rik; MGC118316
Mus musculus	RefSeq	ILMN_215526	ILMN_313328	LOC100040363	XM_001473980.1	XM_001473980.1		100040363	149272825	XM_001473980.1	LOC100040363	XP_001474030.1	ILMN_2660610	003310075	S	781	AAAGAGCCAACATGGAGAATAATCTGAAGTACTCGTTTACTTTCCCATCT	Y|NT_161913.2	+	293173-293222		PREDICTED: Mus musculus similar to Sycp3 like Y-linked, transcript variant 1 (LOC100040363), mRNA.					
Mus musculus	RefSeq	ILMN_217498	ILMN_217498	MYB	NM_010848.3	NM_010848.3		17863	110556653	NM_010848.3	Myb	NP_034978.3	ILMN_2683910	002230195	S	419	GAAGAAGCTGGTGGAACAGAACGGAACAGACGACTGGAAAGTCATTGCCA	10	-	20874500-20874549	10qA3	Mus musculus myeloblastosis oncogene (Myb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC18531; M16449; AI550390; c-myb	MGC18531; M16449; AI550390; c-myb
Mus musculus	RefSeq	ILMN_217498	ILMN_217498	MYB	NM_010848.3	NM_010848.3		17863	110556653	NM_010848.3	Myb	NP_034978.3	ILMN_2752817	005700064	S	3354	TCTGAAATGACAGTGTATCTACTGCCTTGTAGCAAAATAAAGCTATCCTC	10	-	20844752-20844801	10qA3	Mus musculus myeloblastosis oncogene (Myb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC18531; M16449; AI550390; c-myb	MGC18531; M16449; AI550390; c-myb
Mus musculus	MEEBO	ILMN_211649	ILMN_211649	C530008M07RIK	scl0208994.1_192	XM_146963.3			38089910	XM_146963.3	C530008M07Rik		ILMN_2618164	003060243	S	1925	AGCCTTAAACCAAAGAACAAATGGCCGAGCAGAATTAAACAACTGTATCT										
Mus musculus	RefSeq	ILMN_219421	ILMN_219421	HAND2	NM_010402.3	NM_010402.3		15111	141802037	NM_010402.3	Hand2	NP_034532.2	ILMN_1229467	007050468	S	573	AAGCACAGTGAGCAGCAACGACAAGAAAACCAAAGGCCGGACAGGCTGGC	8	+	59802573-59802622	8qB2	Mus musculus heart and neural crest derivatives expressed transcript 2 (Hand2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Th2; Thing2; AI225906; Hed; Ehand2; AI661148; dHAND	Th2; Thing2; AI225906; Hed; Ehand2; AI661148; dHAND
Mus musculus	RefSeq	ILMN_216378	ILMN_216378	LIFR	NM_013584.1	NM_013584.1		16880	7305234	NM_013584.1	Lifr	NP_038612.1	ILMN_2829008	005360220	S	3349	AACCAGGTCACCCTTTGTCACTTCAGTCTGCCATCTCAGTAAGTCCTCCC	15	+	7141175-7141218	15qA1	Mus musculus leukemia inhibitory factor receptor (Lifr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with leukemia inhibitory factor to initiate a change in cell activity [goid 4923] [evidence ISO]	LIF	LIF
Mus musculus	RefSeq	ILMN_216378	ILMN_216378	LIFR	NM_013584.1	NM_013584.1		16880	7305234	NM_013584.1	Lifr	NP_038612.1	ILMN_2829015	001010376	S	3265	TTCCTCCTAAAGACGAAGACTCTCCTAAATCTAATGGAGGAGGGTGGTCC	15	+	7141091-7141140	15qA1	Mus musculus leukemia inhibitory factor receptor (Lifr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with leukemia inhibitory factor to initiate a change in cell activity [goid 4923] [evidence ISO]	LIF	LIF
Mus musculus	RefSeq	ILMN_216378	ILMN_216378	LIFR	NM_013584.1	NM_013584.1		16880	7305234	NM_013584.1	Lifr	NP_038612.1	ILMN_1242960	000670634	S	3196	CCACAGACAGCAACAACGAAGTTGTCTCTTTTGGAAGTCCGTGCTCCATC	15	+	7141022-7141071	15qA1	Mus musculus leukemia inhibitory factor receptor (Lifr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with leukemia inhibitory factor to initiate a change in cell activity [goid 4923] [evidence ISO]	LIF	LIF
Mus musculus	RefSeq	ILMN_249374	ILMN_249374	AK129341	NM_001045524.1	NM_001045524.1		234915	113866018	NM_001045524.1	AK129341	NP_001038989.1	ILMN_2848473	006380458	S	3207	CCTGTCAGCTGAAGAGCAGAAGATCCTGAAGTCACTCCATCACCTCGATG	9	-	8087239-8087288	9qA1	Mus musculus cDNA sequence AK129341 (AK129341), mRNA.				KIAA1377; mKIAA1377	KIAA1377; mKIAA1377
Mus musculus	MEEBO	ILMN_212643	ILMN_212643	1700108F19RIK	scl46079.5.1_24	XM_147840.2			38076400	XM_147840.2	1700108F19Rik		ILMN_2628764	000780609	S	620	AGCACATAAACCAGGATGAGAAAATTAATCAGAAGATAAAAGACAGCGGC										
Mus musculus	RefSeq	ILMN_210927	ILMN_233664	PGR15L	NM_001033361.2	NM_001033361.2		245526	141802340	NM_001033361.2	Pgr15l	NP_001028533.1	ILMN_2610629	007560438	S	1504	GAAGATCCCAGTTTGGCTACAGGGGATAATTCCCAGGTCTCTGTCCAAGG	X	+	94273568-94273617	XqC3	Mus musculus G protein-coupled receptor 15-like (Pgr15l), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199573	ILMN_199573	LOC383669	XM_357177.1	XM_357177.1			38074482	XM_357177.1	LOC383669		ILMN_1231145	004610201	S	1554	TGATCTGCTGACCCTGAAGAACTGCTCCTATTGGCTGGTTCGCACTGAGC										
Mus musculus	RefSeq	ILMN_217896	ILMN_319182	LOC100047707	XM_001478713.1	XM_001478713.1		100047707	149270676	XM_001478713.1	LOC100047707	XP_001478763.1	ILMN_2689025	003360156	S	315	TTGCCTTGAATGTGGACTTGGGAGTGCCAGGAGCCCAGAGTGTCAGGTAC					PREDICTED: Mus musculus hypothetical protein LOC100047707 (LOC100047707), mRNA.					
Mus musculus	RefSeq	ILMN_214738	ILMN_214738	ZFP809	NM_172763.2	NM_172763.2		235047	70778878	NM_172763.2	Zfp809	NP_766351.2	ILMN_2651359	006760575	S	965	CAAGAAGGCTTTCTCCCATCAGTCACAACTCACTGCACATCGGATTGCTC	9	+	22043558-22043607	9qA3	Mus musculus zinc finger protein 809 (Zfp809), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C330026E23; BB114266; MGC117587	C330026E23; BB114266; MGC117587
Mus musculus	RefSeq	ILMN_197311	ILMN_255401	GM73	XM_975059.1	XM_975059.1		218476	94396324	XM_975059.1	Gm73	XP_980153.1	ILMN_1253326	005130731	S	1444	ATACCCGGGGGAATTTCCAGTTCATCTCAGGACGTGTCTGACCTGCAGAG					PREDICTED: Mus musculus gene model 73, (NCBI) (Gm73), mRNA.					
Mus musculus	RefSeq	ILMN_211488	ILMN_211488	GRAMD1C	NM_153528.1	NM_153528.1		207798	23956283	NM_153528.1	Gramd1c	NP_705756.1	ILMN_2616382	004230341	S	3373	AGAATTAATGAGATCTTAATCTGTTATGTATGGATTGACTTCAATAAAAC	16	-	43980469-43980518	16qB4	Mus musculus GRAM domain containing 1C (Gramd1c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4921521N14Rik; MGC47315	4921521N14Rik; MGC47315
Mus musculus	RefSeq	ILMN_219125	ILMN_219125	5830418K08RIK	NM_176976.3	NM_176976.3		319675	141802648	NM_176976.3	5830418K08Rik	NP_795950.1	ILMN_2704594	006520692	S	3816	CAGCAAAGAGAATGAAAGCAAGAAAAAGGATGACCTTTCATTCAAAGTAC	9	-	15121479-15121528	9qA2	Mus musculus RIKEN cDNA 5830418K08 gene (5830418K08Rik), mRNA.				5832426L23Rik; Gm1131	5832426L23Rik; Gm1131
Mus musculus	RefSeq	ILMN_221506	ILMN_221506	BSCL2	NM_008144.3	NM_008144.3		14705	24475903	NM_008144.3	Bscl2	NP_032170.2	ILMN_1221719	004590164	S	1529	CCAGTTCCTGAACAAAGGGTGAATTCCTCACATTCCAGCGCTTTCCCATC	19	+	8923065-8923075:8923076-8923114	19qA	Mus musculus Bernardinelli-Seip congenital lipodystrophy 2 homolog (human) (Bscl2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			Gng3lg; AI046355; 2900097C17Rik	Gng3lg; AI046355; 2900097C17Rik
Mus musculus	RefSeq	ILMN_219101	ILMN_219101	SBP	NM_011321.3	NM_011321.3		20234	116812645	NM_011321.3	Sbp	NP_035451.1	ILMN_1238635	002140220	S	532	TCAATGCTAATGGCAATGACCATTATAATAACAAGGAAGATAAGGCTGAC	17	+	24082267-24082316	17qA3.3	Mus musculus spermine binding protein (Sbp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p25; AV082259; AV082137	p25; AV082259; AV082137
Mus musculus	Riken	ILMN_201968	ILMN_201968	1200017F15RIK	ri|1200017F15|R000009N24|AK004821|3248					AK004821	1200017F15Rik		ILMN_2545999	005910184	S	3198	ATATTTGTACATAAAATGATATTCTGTTTTTAAATAAACAGATAAAACCC										
Mus musculus	RefSeq	ILMN_246417	ILMN_249405	OLFR244	XM_904560.2	XM_904560.2		404222	94364604	XM_904560.2	Olfr244	XP_909653.2	ILMN_3163040	006480088	A	501	TCCGGATCATCATGGTAATTTTGGGGATGCCCTCAGCAGAAGGGAGGCAC				1qH3	PREDICTED: Mus musculus olfactory receptor 244 (Olfr244), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_197359	ILMN_312033	LOC545481	XR_035595.1	XR_035595.1		545481	149250348	XR_035595.1	LOC545481		ILMN_2527859	000360180	S	1738	GGTGAACGTCGCCTGGACCCAGATGCCTACCTCTTGGATTTGTACCGTGC				2qH1	PREDICTED: Mus musculus similar to likely orthologue of H. sapiens chromosome 20 open reading frame 95 (C20orf95) (LOC545481), misc RNA.					
Mus musculus	RefSeq	ILMN_211573	ILMN_211573	MS4A10	NM_023529.2	NM_023529.2		69826	117647223	NM_023529.2	Ms4a10	NP_076018.2	ILMN_2617256	006040754	S	940	CCTCCCATTGGCTGGACTCCGGTGATGACACAGGCGTGACTTGCACAAAT	19	-	11036804-11036853	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 10 (Ms4a10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2010001N17Rik	2010001N17Rik
Mus musculus	RefSeq	ILMN_205173	ILMN_229491	GLS	XM_900189.2	XM_900189.2		14660	94363324	XM_900189.2	Gls	XP_905282.1	ILMN_1224981	002900092	S	5511	CTGTGGTTTGTCTTGTTGCTGTTCTTATTCCATGCCAGTACTGTTGGCCC	1	-	52128684-52128733	1qC1.1	PREDICTED: Mus musculus glutaminase, transcript variant 5 (Gls), mRNA.		The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6543] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [evidence IMP]		
Mus musculus	Riken	ILMN_204543	ILMN_204543	B230380O10RIK	ri|B230380O10|PX00161L15|AK046412|792					AK046412	B230380O10Rik		ILMN_1232126	001030092	S	652	CTCCTGGTTCTAGGGGGGCTACCTTCTCTATGACACTGCACCACCACAGG										
Mus musculus	MEEBO	ILMN_186678	ILMN_186678	SCL000548.1_6	scl000548.1_6	AK051288.1			26094435	AK051288.1	scl000548.1_6		ILMN_2437574	006840037	S	17	TCTTTCGGCAGGCCGGCGAGCAGTGTCTGTGCATGAGGACCAGCTCCAGG										
Mus musculus	RefSeq	ILMN_198596	ILMN_198596	LOC207216	XM_141786.2	XM_141786.2			38086369	XM_141786.2	LOC207216		ILMN_1226276	005670647	S	580	CTCGAGGAGATGTGCTCACCTGGCTACCGGGGAGATCGGATCAGTCAGCT										
Mus musculus	RefSeq	ILMN_219608	ILMN_219608	MAPK9	NM_016961.2	NM_016961.2		26420	46592768	NM_016961.2	Mapk9	NP_058657.1	ILMN_1218582	006590347	S	901	GTCGGGTGCATCATGGCAGAAATGGTCCTCCATAAAGTCCTGTTCCCAGG	11	+	49687352-49687401	11qB1.2	Mus musculus mitogen-activated protein kinase 9 (Mapk9), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p54aSAPK; Prkm9; JNK2; AI851083	p54aSAPK; Prkm9; JNK2; AI851083
Mus musculus	RefSeq	ILMN_208947	ILMN_219608	MAPK9	NM_016961.2	NM_016961.2		26420	46592768	NM_016961.2	Mapk9	NP_058657.1	ILMN_2591066	002690292	S	4217	GTCCCATGCCGATAGTCAGTACAGGTGTGACCTTTCAGATCGCGTATCTC	11	+	49699461-49699510	11qB1.2	Mus musculus mitogen-activated protein kinase 9 (Mapk9), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p54aSAPK; Prkm9; JNK2; AI851083	p54aSAPK; Prkm9; JNK2; AI851083
Mus musculus	RefSeq	ILMN_212198	ILMN_212198	4933433P14RIK	NM_178613.3	NM_178613.3		66787	115292449	NM_178613.3	4933433P14Rik	NP_848728.2	ILMN_1237665	001300706	S	2705	AAAAATGATGTTTGTAGAGTTTAAATAAAATTATTTACTTGATTTTGAGT	12	+	106941186-106941235	12qE	Mus musculus RIKEN cDNA 4933433P14 gene (4933433P14Rik), mRNA.				FLJ20789	FLJ20789
Mus musculus	RefSeq	ILMN_201925	ILMN_212198	4933433P14RIK	NM_178613.3	NM_178613.3		66787	115292449	NM_178613.3	4933433P14Rik	NP_848728.2	ILMN_1260181	003610538	S	53	ATCCTGGCCCCAGCAGTCTCCGGACGAGGAAGGATAAGAACATGGGCGCT	12	+	106923614-106923654:106923655-106923663	12qE	Mus musculus RIKEN cDNA 4933433P14 gene (4933433P14Rik), mRNA.				FLJ20789	FLJ20789
Mus musculus	RefSeq	ILMN_202794	ILMN_212198	4933433P14RIK	NM_178613.3	NM_178613.3		66787	115292449	NM_178613.3	4933433P14Rik	NP_848728.2	ILMN_1250795	002710168	S	1727	GCCACCGTCTGCATCTGGGCACACCTTCATACACTGGTCATCAGCAGATG	12	+	106940208-106940257	12qE	Mus musculus RIKEN cDNA 4933433P14 gene (4933433P14Rik), mRNA.				FLJ20789	FLJ20789
Mus musculus	RefSeq	ILMN_220748	ILMN_220748	HIAT1	NM_008246.1	NM_008246.1		15247	6680220	NM_008246.1	Hiat1	NP_032272.1	ILMN_2726252	004490735	S	2386	TTTCAGGACCCTAGAAGAGAGCTTTATACAATTACTGATGTGAATTTCTC	3	-	116334301-116334350	3qG1	Mus musculus hippocampus abundant gene transcript 1 (Hiat1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]	MGC144858	MGC144858
Mus musculus	RefSeq	ILMN_210126	ILMN_210126	OLFR1076	NM_146406.1	NM_146406.1		258401	33239151	NM_146406.1	Olfr1076	NP_666518.1	ILMN_1258776	006110482	S	562	CTCTGCTCAAATAAAAAGGAAAGTGAAATGATAATTCTAATTCTATCAAC	2	+	86349179-86349228	2qD	Mus musculus olfactory receptor 1076 (Olfr1076), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR189-2	MOR189-2
Mus musculus	RefSeq	ILMN_254071	ILMN_254071	LSM6	NM_030145.1	NM_030145.1		78651	113865834	NM_030145.1	Lsm6	NP_084421.1	ILMN_3000108	001090221	S	1900	TGCATCTGGACCAGCACATGTTGTCCCCTGTGCATACCTTCTTGTGATAG				8qC1	Mus musculus LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm6), mRNA. XM_990335	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]	2410088K19Rik; MGC117708; AI747288; 1500031N17Rik	2410088K19Rik; MGC117708; AI747288; 1500031N17Rik
Mus musculus	MEEBO	ILMN_223319	ILMN_223319	OLFR908	scl37091.1.141_29				22129132	NM_146872	Olfr908		ILMN_2762444	003800010	S	877	GGAACAAAGATGTGAAAATTGCCCTGAAAAAAACATTTAGCACGCAGAGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	Riken	ILMN_205028	ILMN_205028	A430089I07RIK	ri|A430089I07|PX00138E16|AK040372|3827					AK040372	A430089I07Rik		ILMN_2569449	006400452	S	3681	GAGGAGGTGACTAATCCTGTAGAGACGTAATGCCCCAGGGGAGGTGGGTA										
Mus musculus	RefSeq	ILMN_199352	ILMN_199352	LOC385798	XM_358949.1	XM_358949.1			38080577	XM_358949.1	LOC385798		ILMN_1253702	004040021	S	1083	TAACGAATGGAAGGGTCCGGATCTGGTTCTAATCTGGGGAAGGGGCTCGG										
Mus musculus	MEEBO	ILMN_215299	ILMN_215299	HIVEP1	scl0110521.5_186	NM_007772.1			6681032	NM_007772.1	Hivep1		ILMN_2657800	001510040	S	7573	CACCGGCACACATTCAGGGACTCCAAATCCTCAACATCGCCTTGCCCACC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	Riken	ILMN_206353	ILMN_206353	ARVCF	ri|D430005J01|PX00193M24|AK084886|3910					AK084886	Arvcf		ILMN_2579479	007100746	S	2563	TATGCCATGACAGAGCTGGTTCGGAATGTTCGCAAAGCACAGGCTCCCGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217333	ILMN_217333	NDUFA8	NM_026703.1	NM_026703.1		68375	21312011	NM_026703.1	Ndufa8	NP_080979.1	ILMN_2880067	004220519	S	460	TGCCAGAGAATCCTTATCACTCAAGAGCAAGGCCAGAGCCCAACCCTGTG	2	-	35858572-35858621	2qB	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 (Ndufa8), mRNA.	The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AW261656; 0610033L03Rik	AW261656; 0610033L03Rik
Mus musculus	RefSeq	ILMN_237796	ILMN_237796	ORF19	NM_026833.1	NM_026833.1		68767	83649759	NM_026833.1	ORF19	NP_081109.1	ILMN_3079413	000010224	I	8	GGAAGTCGGAGAGCCGAGCTTACAGTGGTGGACGCTAGGACCTGGGAGTG	17	+	66460893-66460942	17qE1.1	Mus musculus open reading frame 19 (ORF19), transcript variant 1, mRNA.				1110049F14Rik	1110049F14Rik
Mus musculus	RefSeq	ILMN_210349	ILMN_237796	ORF19	NM_026833.1	NM_026833.1		68767	83649759	NM_026833.1	ORF19	NP_081109.1	ILMN_1247787	007150112	S	1758	CGGCGGAATAAAGAAAGTAACTGTAGACCTGAACCCAAGCCAACAGTGGC	17	+	66468697-66468746	17qE1.1	Mus musculus open reading frame 19 (ORF19), transcript variant 1, mRNA.				1110049F14Rik	1110049F14Rik
Mus musculus	RefSeq	ILMN_237796	ILMN_237796	ORF19	NM_026833.1	NM_026833.1		68767	83649759	NM_026833.1	ORF19	NP_081109.1	ILMN_3158633	004780326	A	2510	CAAGACCAAGGATGCTCTCCCTGCACTGGGTGTGGAAACCAGAATGGCAG	17	+	66469449-66469498	17qE1.1	Mus musculus open reading frame 19 (ORF19), transcript variant 1, mRNA.				1110049F14Rik	1110049F14Rik
Mus musculus	RefSeq	ILMN_228856	ILMN_228856	KLHL32	NM_001033531.1	NM_001033531.1		212390	83816958	NM_001033531.1	Klhl32	NP_001028703.1	ILMN_2987102	006200079	S	1599	CACGCTGGATATGTGGCTGATGGTCTTCTTTGGATATCAGGTGGGGTGAC	4	-	24723320-24723331:24740170-24740207	4qA3	Mus musculus kelch-like 32 (Drosophila) (Klhl32), mRNA. XM_920702 XM_920713 XM_920719				mKIAA1900; D4Ertd389e; Gm1356; 6430524H05Rik	mKIAA1900; D4Ertd389e; Gm1356; 6430524H05Rik
Mus musculus	RefSeq	ILMN_213979	ILMN_213979	GZME	NM_010373.3	NM_010373.3		14942	116325996	NM_010373.3	Gzme	NP_034503.2	ILMN_1224204	001580427	S	562	GCTCAACTGGTCATCCAGGAGGATGAGGAATGCAAAAAACGTTTCCGACA	14	-	56737148-56737197	14qC3	Mus musculus granzyme E (Gzme), mRNA.		The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Ctla6; Ctla-6; MCSP-2; CCP3	Ctla6; Ctla-6; MCSP-2; CCP3
Mus musculus	MEEBO	ILMN_224288	ILMN_224288	FGD6	scl38536.23.1_129				37693996	NM_053072	Fgd6		ILMN_1212734	005910162	S	4586	GCCGAGACAAATCCGCCCACAGTCGTTATGAGATAGATTGTTTTGTTAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220857	ILMN_226992	4930562C15RIK	XM_906811.3	XM_906811.3		78809	149267731	XM_906811.3	4930562C15Rik	XP_911904.2	ILMN_1216505	003990468	S	2615	CCTTGGGACTACAAGACCATCCTCTAAGGGGCTACAAAATACAGGGGAAC				16qA1	PREDICTED: Mus musculus RIKEN cDNA 4930562C15 gene (4930562C15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200428	ILMN_200428	LOC384278	XM_357536.1	XM_357536.1			38081883	XM_357536.1	LOC384278		ILMN_1224549	005050546	S	370	AGGGAGGATCGGCTGCTGTGCGTGGAGAGCCAGAAGGACGGCAACTTCAA										
Mus musculus	RefSeq	ILMN_208779	ILMN_208779	COL6A1	NM_009933.2	NM_009933.2		12833	118129824	NM_009933.2	Col6a1	NP_034063.1	ILMN_1259388	003170280	S	3903	CTTCATGGCTCCCCCACATTCCCCGTAATCTGATCCAAGCCAGCTATCTC	10	-	76171560-76171609	10qC1	Mus musculus procollagen, type VI, alpha 1 (Col6a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]	AI747156; Col6a-1	AI747156; Col6a-1
Mus musculus	RefSeq	ILMN_208779	ILMN_208779	COL6A1	NM_009933.2	NM_009933.2		12833	118129824	NM_009933.2	Col6a1	NP_034063.1	ILMN_2768087	007210041	S	3706	GTCTGGTCCTTAGTGGCTAGTCCTTCCACTCTGAAAGCAAAGGTGCTATC	10	-	76171757-76171806	10qC1	Mus musculus procollagen, type VI, alpha 1 (Col6a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]	AI747156; Col6a-1	AI747156; Col6a-1
Mus musculus	RefSeq	ILMN_200597	ILMN_200597	LOC383384	XM_357022.1	XM_357022.1			38084022	XM_357022.1	LOC383384		ILMN_2539317	002650270	S	978	TCGAGAGCCAAGACTGCTGAAGCCCAATGATGAGAAGCCGAACCAGTGCG										
Mus musculus	RefSeq	ILMN_197141	ILMN_197141	LOC381341	XM_355305.1	XM_355305.1			38074276	XM_355305.1	LOC381341		ILMN_1216500	005550746	S	3657	GCTGTCTCTGTGTTGTGGCTGCACGGCTGCTGAAATTTGCTGTGACAGGC										
Mus musculus	RefSeq	ILMN_216499	ILMN_249203	PFDN5	NM_027044.3	NM_027044.3		56612	110556632	NM_027044.3	Pfdn5	NP_081320.2	ILMN_2671747	000650598	S	291	CCGGGAAGCTACACGATGTGGAGCATGTGCTTATTGATGTGGGAACCGGC	15	+	102158963-102159012	15qF3	Mus musculus prefoldin 5 (Pfdn5), mRNA.	A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	MM-1; 1700010A06Rik; Eig1; 1190001O17Rik; D15Ertd697e	MM-1; 1700010A06Rik; Eig1; 1190001O17Rik; D15Ertd697e
Mus musculus	RefSeq	ILMN_216499	ILMN_249203	PFDN5	NM_027044.3	NM_027044.3		56612	110556632	NM_027044.3	Pfdn5	NP_081320.2	ILMN_2766262	002190400	S	172	TGCTCAGCTCAAGGTGGTCCAGACCAAGTACGTGGAAGCCAAGGACTGTC	15	+	102156890-102156939	15qF3	Mus musculus prefoldin 5 (Pfdn5), mRNA.	A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	MM-1; 1700010A06Rik; Eig1; 1190001O17Rik; D15Ertd697e	MM-1; 1700010A06Rik; Eig1; 1190001O17Rik; D15Ertd697e
Mus musculus	RefSeq	ILMN_211575	ILMN_211575	G6PC2	NM_021331.3	NM_021331.3		14378	141802327	NM_021331.3	G6pc2	NP_067306.1	ILMN_2629682	005900672	S	1209	CAAAGGTCCTGCTCCACCCACAGACATGTTTAGTCTGCTTTCCAAGTGGC	2	+	69065242-69065291	2qC2	Mus musculus glucose-6-phosphatase, catalytic, 2 (G6pc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IDA]	G6pc-rs; IGRP	G6pc-rs; IGRP
Mus musculus	RefSeq	ILMN_211575	ILMN_211575	G6PC2	NM_021331.3	NM_021331.3		14378	141802327	NM_021331.3	G6pc2	NP_067306.1	ILMN_1234617	004290037	S	514	TTCAAATCAGCGTCTGCATCTCAAGAGTATTCATAGCCACACATTTCCCC	2	+	69063907-69063956	2qC2	Mus musculus glucose-6-phosphatase, catalytic, 2 (G6pc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IDA]	G6pc-rs; IGRP	G6pc-rs; IGRP
Mus musculus	RefSeq	ILMN_222152	ILMN_222152	ZFP474	NM_025749.2	NM_025749.2		66758	42475978	NM_025749.2	Zfp474	NP_080025.2	ILMN_2745406	000460520	S	1438	GACCGCCTACCTGTACACCAGAGAAGTTGTAAATCTCAACCTAGTGGACC	18	+	52798809-52798858	18qD1	Mus musculus zinc finger protein 474 (Zfp474), mRNA.				4933409D10Rik	4933409D10Rik
Mus musculus	RefSeq	ILMN_222152	ILMN_222152	ZFP474	NM_025749.2	NM_025749.2		66758	42475978	NM_025749.2	Zfp474	NP_080025.2	ILMN_2810417	001850551	S	1634	TCTTCAAAAGGATGAGAGAACTATTCCTAGAGTCAGCCACCTCAGCCCCA	18	+	52799005-52799054	18qD1	Mus musculus zinc finger protein 474 (Zfp474), mRNA.				4933409D10Rik	4933409D10Rik
Mus musculus	RefSeq	ILMN_215274	ILMN_215274	MBL2	NM_010776.1	NM_010776.1		17195	6754655	NM_010776.1	Mbl2	NP_034906.1	ILMN_1258500	007380554	S	677	CTCGGCCATCCAGAAAGTGGCCAAAGATATTGCCTACTTGGGCATCACAG	19	+	30313780-30313829	19qC1	Mus musculus mannose-binding lectin (protein C) 2 (Mbl2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]	Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MBL-C; L-MBP; MBL; MBP-C	MBL-C; L-MBP; MBL; MBP-C
Mus musculus	RefSeq	ILMN_222993	ILMN_258539	SV2C	XM_914033.2	XM_914033.2		75209	94395548	XM_914033.2	Sv2c	XP_919126.1	ILMN_2757824	003890767	S	2254	AACGCCCTCTGTAAAGCGGCGGCCGTCCTGGGAAACTTAATCTTCGGCTC				13qD1	PREDICTED: Mus musculus synaptic vesicle glycoprotein 2c, transcript variant 2 (Sv2c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210805	ILMN_210805	ASTN2	scl0002838.1_50	NM_207109.1			46488929	NM_207109.1	Astn2		ILMN_1237828	006650056	S	1231	GTTTCCGTGCTAACACACCAGTGGAGATCGGTCAGTTGCAGCCAGCCTCG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_223654	ILMN_223654	MRPL53	NM_026744.3	NM_026744.3		68499	133506706	NM_026744.3	Mrpl53	NP_081020.1	ILMN_2767187	004180240	S	37	GCCGGTCAAGCTGGTTCGAGTTCAGTTCTGCCCGTTTGAGAAGAACGTGG	6	+	83059138-83059187	6qC3	Mus musculus mitochondrial ribosomal protein L53 (Mrpl53), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]			1110007K17Rik	1110007K17Rik
Mus musculus	RefSeq	ILMN_244016	ILMN_244016	FNBP1	NM_001038700.1	NM_001038700.1		14269	84662769	NM_001038700.1	Fnbp1	NP_001033789.1	ILMN_3041011	002100196	I	3999	GCATGCTTATCCAGGGCCCCAGCCCAAACAACACACAGGGAGGCCATTAA	2	-	30882204-30882253	2qB	Mus musculus formin binding protein 1 (Fnbp1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FBP1; 1110057E06Rik; Fbp17; 2210010H06Rik	FBP1; 1110057E06Rik; Fbp17; 2210010H06Rik
Mus musculus	RefSeq	ILMN_244016	ILMN_244016	FNBP1	NM_001038700.1	NM_001038700.1		14269	84662769	NM_001038700.1	Fnbp1	NP_001033789.1	ILMN_3115777	001690315	A	923	AGGTGATACCCATCATCGGGAAGTGCCTGGACGGGATAGTGAAGGCGGCC	2	-	30910968-30911017	2qB	Mus musculus formin binding protein 1 (Fnbp1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FBP1; 1110057E06Rik; Fbp17; 2210010H06Rik	FBP1; 1110057E06Rik; Fbp17; 2210010H06Rik
Mus musculus	RefSeq	ILMN_186271	ILMN_244016	FNBP1	NM_001038700.1	NM_001038700.1		14269	84662769	NM_001038700.1	Fnbp1	NP_001033789.1	ILMN_1255974	006620180	S	4389	AGCTGTCAGGTCTTGGTCTTGCCTGTGACTCTGGAGGTGGAATTAAAACC	2	-	30881814-30881863	2qB	Mus musculus formin binding protein 1 (Fnbp1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FBP1; 1110057E06Rik; Fbp17; 2210010H06Rik	FBP1; 1110057E06Rik; Fbp17; 2210010H06Rik
Mus musculus	RefSeq	ILMN_196444	ILMN_248596	AI747448	NM_001033199.2	NM_001033199.2		99709	141802748	NM_001033199.2	AI747448	NP_001028371.1	ILMN_1253045	000520561	S	2675	CGTTCATCAGGAGTTAGTATTTCTACTATTGTGCTGTCTGTGGTGGGCTC	3	-	144574161-144574210	3qH2	Mus musculus expressed sequence AI747448 (AI747448), mRNA.					
Mus musculus	MEEBO	ILMN_188246	ILMN_188246	RASA3	scl35073.24_555				7110712	NM_009025	Rasa3		ILMN_1216190	005550164	S	3	GTAGAGGAGGTTCCCTACAGGTAGGGTGGCAGATAAAGGTGGTTGGCATC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200300	ILMN_200300	LOC386169	XM_359104.1	XM_359104.1			38081258	XM_359104.1	LOC386169		ILMN_1236603	006400364	S	288	AACATACAAACAGAGTTGGCATTCTGTTCTTGTGGCTGTCTTCTTTTTGG										
Mus musculus	RefSeq	ILMN_219358	ILMN_219358	OLFR578	NM_147115.1	NM_147115.1		259119	22128746	NM_147115.1	Olfr578	NP_667326.1	ILMN_2707652	001850681	S	658	TACACCCTCATCCTCCATGCTGTACTAGGCAAAGCCTCCCGTCAGGAGCG	7	-	110132969-110133018	7qE3	Mus musculus olfactory receptor 578 (Olfr578), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR7-1	MOR7-1
Mus musculus	RefSeq	ILMN_197917	ILMN_197917	GM444	XM_144253.6	XM_144253.6		242915	94374640	XM_144253.6	Gm444	XP_144253.5	ILMN_1250997	006960735	S	2589	GGTGAGCTTCTTTGCCCGAGAACGCATCGACGGAAGCATCTTTGTGCAGC	5	+	30443683-30443732	5qB1	PREDICTED: Mus musculus gene model 444, (NCBI) (Gm444), mRNA.					
Mus musculus	RefSeq	ILMN_217146	ILMN_197917	GM444	XM_144253.6	XM_144253.6		242915	94374640	XM_144253.6	Gm444	XP_144253.5	ILMN_2679586	007000327	S	3841	GCCAACACCCAGGGCCCTACTCTTTCACCACTCCAGGGTCTAGCCTTTAT	5	+	30444935-30444984	5qB1	PREDICTED: Mus musculus gene model 444, (NCBI) (Gm444), mRNA.					
Mus musculus	RefSeq	ILMN_191238	ILMN_191238	WNT9B	NM_011719.2	NM_011719.2		22412	31543961	NM_011719.2	Wnt9b	NP_035849.2	ILMN_2937340	004390403	S	4024	TCAGTTCACTGGCAAATGGGACCTGCATCCTGACCTGGCTGCCTGCATCA	11	-	103543898-103543947	11qE1	Mus musculus wingless-type MMTV integration site 9B (Wnt9b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	MGC124412; Wnt15; Wnt14b	MGC124412; Wnt15; Wnt14b
Mus musculus	MEEBO	ILMN_211659	ILMN_211659	PTPLA	scl030963.1_56	NM_013935.1			7305420	NM_013935.1	Ptpla		ILMN_1236003	004920768	S	115	TATGGGGAAAGGTGATTGGAGGCAGGGCAGAGTAGAGATGCCTTGTGCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_237906	ILMN_237906	VDAC1	NM_011694.1	NM_011694.1		22333	6755962	NM_011694.1	Vdac1	NP_035824.1	ILMN_2832808	002100392	S	1395	TTCTTTTGTGCCATTTTAGGGTGGAGAGGGTGGGCGTGATGGAGCCAGTC	11	+	52232448-52232497	11qB1.3	Mus musculus voltage-dependent anion channel 1 (Vdac1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Catalysis of the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion [goid 8308] [evidence IEA]	AL033343; Vdac5	AL033343; Vdac5
Mus musculus	RefSeq	ILMN_198394	ILMN_217836	CDC42BPG	XM_140553.7	XM_140553.7		240505	149270271	XM_140553.7	Cdc42bpg	XP_140553.6	ILMN_2531530	004280743	S	460	GCGTCTACAGAGAGATGACTTTGAGATCTTGAAGGTGATTGGCAGAGGGG	19	+	6309157-6309206	19qA	PREDICTED: Mus musculus CDC42 binding protein kinase gamma (DMPK-like) (Cdc42bpg), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211351	ILMN_211351	FOXE3	NM_015758.1	NM_015758.1		30923	7657097	NM_015758.1	Foxe3	NP_056573.1	ILMN_1225391	001660681	S	780	ATCGGCCGGCGCGCTCGGGCCGCTCGGAGCCGGGGAAGCCTACCTGAGAC	4	-	114597789-114597838	4qD1	Mus musculus forkhead box E3 (Foxe3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence ISO]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]	FREAC8; dyl	FREAC8; dyl
Mus musculus	MEEBO	ILMN_208878	ILMN_208878	4930565A21RIK	scl0319586.1_30	NM_176954.2			31342461	NM_176954.2	4930565A21Rik		ILMN_2590411	002350338	S	883	CCTCGGATCTCAGGCTGAGTCCTAATAGCCTGATCGATCTCTGATCCCAG										
Mus musculus	MEEBO	ILMN_208878	ILMN_208878	4930565A21RIK	scl0319586.1_30	NM_176954.2			31342461	NM_176954.2	4930565A21Rik		ILMN_2741495	007040192	S	885	TCGGATCTCAGGCTGAGTCCTAATAGCCTGATCGATCTCTGATCCCAGAA										
Mus musculus	RefSeq	ILMN_197740	ILMN_243524	4631416L12RIK	NM_001081295.1	NM_001081295.1		622434	124486828	NM_001081295.1	4631416L12Rik	NP_001074764.1	ILMN_1246647	004280367	S	3143	TGCAGGTGGCAGACGTGGTCCTCATTTATCAGCGTGTTGGCGATGGCTGG	3	+	62263592-62263636:62264126-62264130	3qE1	Mus musculus RIKEN cDNA 4631416L12 gene (4631416L12Rik), mRNA.				AW491953; 8430436L14Rik; SGEF; AI303572	AW491953; 8430436L14Rik; SGEF; AI303572
Mus musculus	RefSeq	ILMN_197740	ILMN_243524	4631416L12RIK	NM_001081295.1	NM_001081295.1		622434	124486828	NM_001081295.1	4631416L12Rik	NP_001074764.1	ILMN_2591219	006590370	S	5001	GTACAGTGTGACTTCACTCCTGCAAAACCAGAAATGTTACTTTTGTTCCA	3	+	62265939-62265988	3qE1	Mus musculus RIKEN cDNA 4631416L12 gene (4631416L12Rik), mRNA.				AW491953; 8430436L14Rik; SGEF; AI303572	AW491953; 8430436L14Rik; SGEF; AI303572
Mus musculus	RefSeq	ILMN_201599	ILMN_201599	PLEKHG1	XM_136911.3	XM_136911.3			38090359	XM_136911.3	Plekhg1		ILMN_2705341	003310241	S	6623	CTTGGAAAACATACTTTAAATACTGTATATAAGACAATGAAACTTAGTAA										
Mus musculus	RefSeq	ILMN_233734	ILMN_233734	CAR12	NM_178396.3	NM_178396.3		76459	31560837	NM_178396.3	Car12	NP_848483.2	ILMN_2891583	004730692	S	3149	TCGCCTTGTGCTCCTTAACTCTGCCGTGCGAGGTGCAAGGTGGGTGCCTA	9	+	66614141-66614190	9qC	Mus musculus carbonic anyhydrase 12 (Car12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	AI314958; 2310047E01Rik	AI314958; 2310047E01Rik
Mus musculus	Riken	ILMN_203959	ILMN_203959	A430088A22RIK	ri|A430088A22|PX00138P05|AK040344|1533					AK040344	A430088A22Rik		ILMN_1244044	007320068	S	1458	CTGCAGGACTGGGGATATAGTGCAATGTACAGTGTTTGCCCAACATGTAG										
Mus musculus	RefSeq	ILMN_198695	ILMN_236856	LOC270665	XR_003093.1	XR_003093.1		270665	94409521	XR_003093.1	LOC270665		ILMN_1219689	005310255	S	498	TGGTGCCAAGGGTCCTGCTAAATTTGCCCAGGAAAAGGTGGAAGAAATGG				XqF3	PREDICTED: Mus musculus similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a) (LOC270665), mRNA.					
Mus musculus	RefSeq	ILMN_214711	ILMN_214711	BHMT2	NM_022884.2	NM_022884.2		64918	145553962	NM_022884.2	Bhmt2	NP_075022.2	ILMN_2651019	000610576	S	1657	GATGGCCAAGGACCGTATAATATGCTTCTTACATTCCTCTCTGCTTAGCT				13qC3	Mus musculus betaine-homocysteine methyltransferase 2 (Bhmt2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence ISO]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: homocysteine + betaine = L-methionine + dimethylglycine [goid 47150] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine [goid 8898] [evidence ISO]	C81077; D13Ucla2	C81077; D13Ucla2
Mus musculus	RefSeq	ILMN_220909	ILMN_220909	SSTR1	NM_009216.3	NM_009216.3		20605	127139899	NM_009216.3	Sstr1	NP_033242.1	ILMN_2728465	007160504	S	1445	CAGCTGGATGGATAACGCTGCGGAGGAACCAGTCGACTACTATGCCACTG	12	+	59314599-59314648	12qC1	Mus musculus somatostatin receptor 1 (Sstr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [evidence IDA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [evidence IDA]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [evidence IMP]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [evidence ISO]	Smstr1; sst1; Smstr-1	Smstr1; sst1; Smstr-1
Mus musculus	RefSeq	ILMN_185725	ILMN_255092	1700123A16RIK	XM_924400.3	XM_924400.3		73610	149261308	XM_924400.3	1700123A16Rik	XP_929493.2	ILMN_2429477	000380138	S	1939	AGAGAAACCCTATGAATGGAATTGAAACAGTAAAGCTTTGGCACATCAGT				10qC1	PREDICTED: Mus musculus RIKEN cDNA 1700123A16 gene, transcript variant 26 (1700123A16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201239	ILMN_201239	LOC382100	XM_356181.1	XM_356181.1			38090064	XM_356181.1	LOC382100		ILMN_2541584	002480142	S	2215	GCCGCCAGGCTTGTTGGCATACTTGGACAGTTCAGATCCAGTTCCGGAGA										
Mus musculus	RefSeq	ILMN_199525	ILMN_199525	LOC382673	XM_356621.1	XM_356621.1			38073979	XM_356621.1	LOC382673		ILMN_1257710	007040180	S	292	GGTTGGGTGGAGAAGCAGAGGAAGCAGAAGAAGCAGAGGAAGCAGGTTGC										
Mus musculus	RefSeq	ILMN_196435	ILMN_225888	NAT12	NM_001081430.1	NM_001081430.1		70646	124487476	NM_001081430.1	Nat12	NP_001074899.1	ILMN_2623754	000870730	S	4018	CCATGCCCTGTGTTAAGGTCTTGGCTGGTATATATGACTAGATGTGTATG	14	+	49810127-49810176	14qC1	Mus musculus N-acetyltransferase 12 (Nat12), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	4930487N19Rik; AW322455; AI447922; 5730533P17Rik	4930487N19Rik; AW322455; AI447922; 5730533P17Rik
Mus musculus	RefSeq	ILMN_196513	ILMN_235784	1700021P22RIK	XM_001002617.1	XM_001002617.1		75538	94382170	XM_001002617.1	1700021P22Rik	XP_001002617.1	ILMN_2655322	001030138	S	863	CCCAAGACGTCTCTGCCCTTTCTACCTCTGCCTCAGCCTTCCAGATAGCT				7qB4	PREDICTED: Mus musculus RIKEN cDNA 1700021P22 gene, transcript variant 2 (1700021P22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209979	ILMN_209979	1700028P14RIK	NM_026188.2	NM_026188.2		67483	142361429	NM_026188.2	1700028P14Rik	NP_080464.1	ILMN_2601035	002750008	S	751	GAAATCCTATTGTCCCATTTTAAAAAAGCAATGTATACAACCAGACCCTC	19	-	23633317-23633344:23633345-23633366	19qB	Mus musculus RIKEN cDNA 1700028P14 gene (1700028P14Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AV209940	AV209940
Mus musculus	RefSeq	ILMN_193748	ILMN_321343	MEG3	NR_003633.1	NR_003633.1		17263	154146221	NR_003633.1	Meg3		ILMN_2500067	005260348	S	1965	GTCACTCACCCAGCTAAACATGCATTATGTGATGTAACACACACCAGTGA				12qF1	Mus musculus maternally expressed 3 (Meg3), non-coding RNA.				Meg3; D12Bwg1266e; 3110050O07Rik; AW108224; 2900016C05Rik; 6330408G06Rik; R74756; AI425946; R75394	Meg3; D12Bwg1266e; 3110050O07Rik; AW108224; 2900016C05Rik; 6330408G06Rik; R74756; AI425946; R75394
Mus musculus	RefSeq	ILMN_192346	ILMN_321343	MEG3	NR_003633.1	NR_003633.1		17263	154146221	NR_003633.1	Meg3		ILMN_2601176	003180347	S	1921	GGTGTGTGTTACATCACATAATGCATGTTTAGCTGGGTGAGTGACAACAG				12qF1	Mus musculus maternally expressed 3 (Meg3), non-coding RNA.				Meg3; D12Bwg1266e; 3110050O07Rik; AW108224; 2900016C05Rik; 6330408G06Rik; R74756; AI425946; R75394	Meg3; D12Bwg1266e; 3110050O07Rik; AW108224; 2900016C05Rik; 6330408G06Rik; R74756; AI425946; R75394
Mus musculus	RefSeq	ILMN_192346	ILMN_321343	MEG3	NR_003633.1	NR_003633.1		17263	154146221	NR_003633.1	Meg3		ILMN_1227149	006110544	S	2739	TGTAGCTGGAAGACGGGGCCTGGCTAGGGACGGGATGAGAGGCTGTGTCA				12qF1	Mus musculus maternally expressed 3 (Meg3), non-coding RNA.				Meg3; D12Bwg1266e; 3110050O07Rik; AW108224; 2900016C05Rik; 6330408G06Rik; R74756; AI425946; R75394	Meg3; D12Bwg1266e; 3110050O07Rik; AW108224; 2900016C05Rik; 6330408G06Rik; R74756; AI425946; R75394
Mus musculus	RefSeq	ILMN_201526	ILMN_201526	SPAG11	NM_153115.1	NM_153115.1		78128	23346552	NM_153115.1	Spag11	NP_694755.1	ILMN_1248179	000010133	S	25	CCTGCTTTCCTGCACAGAGAGCGAGCCGTAAAACATGAAAGTCTTGTTAC	8	+	19157911-19157944:19157945-19157960	8qA1.3	Mus musculus sperm associated antigen 11 (Spag11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence ISO]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	EP2Q; 9230111C08Rik; Bin1b; EP2e	EP2Q; 9230111C08Rik; Bin1b; EP2e
Mus musculus	MEEBO	ILMN_219552	ILMN_219552	GABPB2	scl00213054.1_9	NM_172512.1			27369711	NM_172512.1	Gabpb2		ILMN_2715180	005340382	S	37	CGCTGGCAAGGAGTCTTAACTAGAGAAAGAAACGGGACCAAACTGGCGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	Riken	ILMN_206543	ILMN_206543	D630028M02RIK	ri|D630028M02|PX00197D03|AK085452|1909					AK085452	D630028M02Rik		ILMN_1240162	006220445	S	1459	CGTAACTACTGGGAATATTAACTGTGTCTTGACTGCCTCTGCCAGCAGTG										
Mus musculus	RefSeq	ILMN_218825	ILMN_218825	LRRC28	NM_175124.4	NM_175124.4		67867	142366563	NM_175124.4	Lrrc28	NP_780333.2	ILMN_2700699	004390022	S	2773	GGGCTGCATCTGTGTTTTGCCCTCGACCATCTTATGTCTTAAGTGGAGCT	7	-	74658396-74658445	7qC	Mus musculus leucine rich repeat containing 28 (Lrrc28), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310058O11Rik; 1300004K21Rik; 2210012C09Rik	2310058O11Rik; 1300004K21Rik; 2210012C09Rik
Mus musculus	RefSeq	ILMN_191979	ILMN_239002	YTHDF2	NM_145393.3	NM_145393.3		213541	142353711	NM_145393.3	Ythdf2	NP_663368.2	ILMN_1225360	004640563	S	2876	GCCTTTCTTTTTCCCATTAATCACTTCTCAATAAACGTGAGAGCCTGTCG	4	-	131741983-131742032	4qD2.3	Mus musculus YTH domain family 2 (Ythdf2), mRNA.				HGRG8; NY-REN-2; 9430020E02Rik	HGRG8; NY-REN-2; 9430020E02Rik
Mus musculus	RefSeq	ILMN_191979	ILMN_239002	YTHDF2	NM_145393.3	NM_145393.3		213541	142353711	NM_145393.3	Ythdf2	NP_663368.2	ILMN_2520635	000430605	S	178	GTGTCTCTGCTGCGTCCGCCGAGGCGAGGCTCCGAGTGTCAGGGACAAAA	4	-	131767944-131767993	4qD2.3	Mus musculus YTH domain family 2 (Ythdf2), mRNA.				HGRG8; NY-REN-2; 9430020E02Rik	HGRG8; NY-REN-2; 9430020E02Rik
Mus musculus	MEEBO	ILMN_223863	ILMN_223863	RAI3	scl0232431.4_71				32129215	NM_181444	Rai3		ILMN_1246785	002690221	S	1772	CCAAGGGCCACATTTTCATCCCAATCGCCTCCAAACTCACTGCCAACCCC										
Mus musculus	RefSeq	ILMN_256671	ILMN_256671	ADD1	NM_001024458.1	NM_001024458.1		11518	66792809	NM_001024458.1	Add1	NP_001019629.1	ILMN_3033533	003460592	I	3496	GGCACCAAGCAGGGCCCCACAGCCTCTTGCACTGCTAGTCTCACCAGTCA	5	+	34948939-34948988	5qB2	Mus musculus adducin 1 (alpha) (Add1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI256389	AI256389
Mus musculus	RefSeq	ILMN_256671	ILMN_256671	ADD1	NM_001024458.1	NM_001024458.1		11518	66792809	NM_001024458.1	Add1	NP_001019629.1	ILMN_3107228	003850386	A	2934	CTTACTGGGGTCTTGGATTCCCATCTTAGGGAACAGATACCAGGAGGGTG	5	+	34948377-34948426	5qB2	Mus musculus adducin 1 (alpha) (Add1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI256389	AI256389
Mus musculus	Riken	ILMN_203803	ILMN_203803	A230097B02RIK	ri|A230097B02|PX00130K03|AK039107|4109					AK039107	A230097B02Rik		ILMN_1253912	004890767	S	3734	TGGACGTGTACTATGTGTATGCCTGGTGCTTGCAGAGGCCACAAGAGGGC										
Mus musculus	MEEBO	ILMN_193347	ILMN_193347	GOT2	scl33453.1.1_322				6754035	NM_010325	Got2		ILMN_1255041	004070725	S	1	GTCCCTGTTAGAGGACAACAGGCATATTTTGTGGGGCAGTTGTGAGTATT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid [goid 6532] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including 2-oxoglutarate [goid 19551] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including aspartate [goid 19550] [evidence IDA]; The chemical reactions and pathways involving oxaloacetate, the anion of oxobutanedioic acid, an important intermediate in metabolism, especially as a component of the TCA cycle [goid 6107] [evidence IDA]	Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate [goid 4069] [evidence IDA]; Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate [goid 4069] [evidence IDA]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213498	ILMN_213498	PNO1	NM_025443.2	NM_025443.2		66249	114145526	NM_025443.2	Pno1	NP_079719.1	ILMN_1233889	003440500	S	1175	CCAGGCACTGTGACTATTTCAGGGTTGAGTCATGGCAGAAACTTGCACTA	11	-	17103541-17103590	11qA2	Mus musculus partner of NOB1 homolog (S. cerevisiae) (Pno1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AA407421; AU015468; 1810003N24Rik; RP23-32H19.2; AU019495; AU042323	AA407421; AU015468; 1810003N24Rik; RP23-32H19.2; AU019495; AU042323
Mus musculus	RefSeq	ILMN_222727	ILMN_222727	GRB2	NM_008163.3	NM_008163.3		14784	118130949	NM_008163.3	Grb2	NP_032189.1	ILMN_2995537	004290020	S	1765	GGGGAAAGAGGACAGAGAAAGGAGCTGGTAGAAGCAGAGAGTGTATTTCC	11	-	115506253-115506302	11qE2	Mus musculus growth factor receptor bound protein 2 (Grb2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IPI]	Ash; AA408164	Ash; AA408164
Mus musculus	RefSeq	ILMN_229854	ILMN_229854	CNIH4	NM_030131.2	NM_030131.2		98417	68226733	NM_030131.2	Cnih4	NP_084407.1	ILMN_2788629	004880554	S	423	CTGAAGCTGGAGAAGCCGGGTTGAAGCCAAGCTATACTACACACTGCACA	1	+	183096336-183096339:183096340-183096385	1qH4	Mus musculus cornichon homolog 4 (Drosophila) (Cnih4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		E430023H19Rik; AW050376; AI647760; HSPC163; D530030D03Rik	E430023H19Rik; AW050376; AI647760; HSPC163; D530030D03Rik
Mus musculus	RefSeq	ILMN_185181	ILMN_229854	CNIH4	NM_030131.2	NM_030131.2		98417	68226733	NM_030131.2	Cnih4	NP_084407.1	ILMN_2424866	000620360	S	152	TCCCGGAGTTGGTCGGCCACACCATTGTCACTGTGCTGATGCTTGTCTCC	1	+	183085997-183086046	1qH4	Mus musculus cornichon homolog 4 (Drosophila) (Cnih4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		E430023H19Rik; AW050376; AI647760; HSPC163; D530030D03Rik	E430023H19Rik; AW050376; AI647760; HSPC163; D530030D03Rik
Mus musculus	RefSeq	ILMN_212388	ILMN_212388	2310016C16RIK	NM_027127.1	NM_027127.1		69590	21312335	NM_027127.1	2310016C16Rik	NP_081403.1	ILMN_2625854	003930050	S	289	ACACAAGGAGTTCGGGCCCTATCACTTCAACGTCCTGGCTTTTCCGTGCA	13	-	114166450-114166499	13qD2.2	Mus musculus RIKEN cDNA 2310016C16 gene (2310016C16Rik), mRNA.				AU017063	AU017063
Mus musculus	Riken	ILMN_205577	ILMN_205577	A630078J04RIK	ri|A630078J04|PX00147L24|AK042286|2178					AK042286	A630078J04Rik		ILMN_1245600	002320494	S	493	CCCCAGGAGGAACCAGGATGTCAAAACTCTCTCAAGCTTCCCAGGCTGTC										
Mus musculus	RefSeq	ILMN_261689	ILMN_261689	MYL6	NM_010860.2	NM_010860.2		17904	34916052	NM_010860.2	Myl6	NP_034990.1	ILMN_2900910	000870735	S	341	CCGTCATGTCCTAGTCACACTGGGCGAGAAGATGACAGAGGAAGAAGTAG	10	-	127895058-127895085:127895178-127895199	10qD3	Mus musculus myosin, light polypeptide 6, alkali, smooth muscle and non-muscle (Myl6), mRNA.	A portmanteau term for myosins other than myosin II [goid 16461] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated [goid 30049] [evidence TAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence TAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence TAS]	LC17-NM; LC17-GI; MGC107135; ESMLC; MGC106465; MLC3nm; MLC1SM; LC17B; MLC3SM; Myln; LC17A	LC17-NM; LC17-GI; MGC107135; ESMLC; MGC106465; MLC3nm; MLC1SM; LC17B; MLC3SM; Myln; LC17A
Mus musculus	RefSeq	ILMN_217546	ILMN_217546	LAP3	NM_024434.4	NM_024434.4		66988	142388799	NM_024434.4	Lap3	NP_077754.2	ILMN_2684552	007650672	S	1825	TATTTACTATTTTTACAAGATAGGGGAAATCTTAAGTCCATAAAAATGGA	5	+	45903538-45903587	5qB3	Mus musculus leucine aminopeptidase 3 (Lap3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	LAP; Pep-7; 2410015L10Rik; LAPEP; AA410100; Pep-S; Pep7	LAP; Pep-7; 2410015L10Rik; LAPEP; AA410100; Pep-S; Pep7
Mus musculus	RefSeq	ILMN_223293	ILMN_223293	PKP1	NM_019645.2	NM_019645.2		18772	118130660	NM_019645.2	Pkp1	NP_062619.1	ILMN_2762109	003940070	S	4160	CCTAGAAGCAGGAGGTAAGGGGCTGGCTGGACTTTCTGTATCCCAGACTT	1	-	137768248-137768297	1qE4	Mus musculus plakophilin 1 (Pkp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI528551	AI528551
Mus musculus	RefSeq	ILMN_209963	ILMN_209963	PRSS27	NM_175440.2	NM_175440.2		213171	31341909	NM_175440.2	Prss27	NP_780649.1	ILMN_3136983	001190327	A	824	AGAGGGTTGTGCCCGTCGGAATCGCCCAGGTGTCTACATCCGTGTGACTT	17	+	23773246-23773295	17qA3.3	Mus musculus protease, serine 27 (Prss27), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	CAPH2; Mpn; marapsin	CAPH2; Mpn; marapsin
Mus musculus	RefSeq	ILMN_209963	ILMN_209963	PRSS27	NM_175440.2	NM_175440.2		213171	31341909	NM_175440.2	Prss27	NP_780649.1	ILMN_3059649	006940437	I	243	ATCCACTTCTGTGGGGGCAGTCTCATCGCACCAACATGGGTCCTCACTGC	17	+	23770520-23770569	17qA3.3	Mus musculus protease, serine 27 (Prss27), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	CAPH2; Mpn; marapsin	CAPH2; Mpn; marapsin
Mus musculus	RefSeq	ILMN_226792	ILMN_226792	NOVA2	NM_001029877.1	NM_001029877.1		384569	71274145	NM_001029877.1	Nova2	NP_001025048.1	ILMN_3119895	007560487	A	1456	CTGACGGCCGAGAAGCTGGCGGCCGAGAGCGCCAAGGAGCTGGTGGAGAT	7	+	19543671-19543720	7qA3	Mus musculus neuro-oncological ventral antigen 2 (Nova2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]	Gm1424	Gm1424
Mus musculus	RefSeq	ILMN_226792	ILMN_226792	NOVA2	NM_001029877.1	NM_001029877.1		384569	71274145	NM_001029877.1	Nova2	NP_001025048.1	ILMN_3044523	004590370	I	1885	CACCCTCCCTTCTGGTAGTCATAGGCAGGATTGAGTGACGACTGACGAGG	7	+	19544100-19544149	7qA3	Mus musculus neuro-oncological ventral antigen 2 (Nova2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]	Gm1424	Gm1424
Mus musculus	RefSeq	ILMN_199191	ILMN_199191	LOC237880	XM_137762.1	XM_137762.1			20883495	XM_137762.1	LOC237880		ILMN_2534368	003890674	S	617	AGAAGGTGGCAGCCATCATTTCTGCTGAGGGGGACGCTAAGGCGGCAGAG										
Mus musculus	RefSeq	ILMN_213582	ILMN_213582	SYCP2	NM_177191.3	NM_177191.3		320558	109689712	NM_177191.3	Sycp2	NP_796165.2	ILMN_1257018	005890364	S	5291	GTGTTTTATGAACCATGACTTACAAGCCACCTTCAGTCAGACACTTGAAG	2	-	178080347-178080396	2qH4	Mus musculus synaptonemal complex protein 2 (Sycp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930518F03Rik; 3830402K23Rik	4930518F03Rik; 3830402K23Rik
Mus musculus	RefSeq	ILMN_187024	ILMN_213582	SYCP2	NM_177191.3	NM_177191.3		320558	109689712	NM_177191.3	Sycp2	NP_796165.2	ILMN_2440514	004590307	S	1065	CGATTTTAATCTTGGGAGCCACACTCTGTCATTCTACATTGCTGGAGATG	2	-	178126400-178126449	2qH4	Mus musculus synaptonemal complex protein 2 (Sycp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930518F03Rik; 3830402K23Rik	4930518F03Rik; 3830402K23Rik
Mus musculus	RefSeq	ILMN_216939	ILMN_310140	1700023L04RIK	XM_001477261.1	XM_001477261.1		76419	149254978	XM_001477261.1	1700023L04Rik	XP_001477311.1	ILMN_2677217	000840082	S	881	GCTAAGCCAGGCACTAGGTAAGCCACTTTGGTTTTTCAGAAGTAATCAGG				6qA3.3	PREDICTED: Mus musculus RIKEN cDNA 1700023L04 gene (1700023L04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216523	ILMN_216523	HTT	NM_010414.1	NM_010414.1		15194	45439303	NM_010414.1	Htt	NP_034544.1	ILMN_2672091	000270315	S	9655	GCCAGGCAATGGCAGGAGTGCTTTGCAATGAGGGCTATGCAGGGAACATG	5	+	35251619-35251668	5qB2	Mus musculus huntingtin (Htt), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Intracellular foci at which aggregated proteins have been sequestered [goid 16234] [evidence IDA]	The formation of the flat, thickened layer of ectodermal cells known as the neural plate. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system [goid 21990] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking [goid 21756] [evidence IMP]; The progression of the olfactory lobe over time from its initial formation until its mature state. The olfactory lobe is the area of the brain that process the neural inputs for the sense of smell [goid 21988] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions [goid 55072] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IMP]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The chemical reactions and pathways resulting in the formation of quinolinate, the anion of quinolinic acid, also known as 2,3-pyridinedicarboxylic acid [goid 19805] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The directed movement of L-glutamate, the levorotatory isomer of the anion of 2-aminopentanedioic acid, into a cell or organelle [goid 51938] [evidence IMP]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The chemical reactions and pathways involving citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins [goid 52] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IMP]; The chemical reactions and pathways resulting in the formation of lactate from other compounds, including pyruvate [goid 19244] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IMP]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [evidence IMP]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IDA]; The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 48341] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; The regulated release of a peptide hormone from secretory granules [goid 30072] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]; The regulated release of a peptide hormone from secretory granules [goid 30072] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]	Interacting selectively with diazepam, one of the most widely used benzodiazepine drugs. It is used as an anti-anxiety-hypnotic agent and has the proprietary name Valium [goid 50809] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	IT15; C430023I11Rik; htt; AI256365; HD	IT15; C430023I11Rik; htt; AI256365; HD
Mus musculus	Riken	ILMN_206096	ILMN_206096	E530003F24RIK	ri|E530003F24|PX00319I07|AK054552|3488					AK054552	E530003F24Rik		ILMN_2577511	004610341	S	3041	GAGCTTACTCGTGGGCCATGCTGTGCACAGAGGATATCCAGAACAACCTC										
Mus musculus	MEEBO	ILMN_187287	ILMN_187287	SNAPC3	scl0319879.1_4				31745184	NM_029949	Snapc3		ILMN_1227991	000010025	S	20	TTTTAAAGAGACAAAAGTTTTACTATGTTACCCTTGCTGGCTGCAAATGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185860	ILMN_245109	MED25	NM_029365.2	NM_029365.2		75613	142350961	NM_029365.2	Med25	NP_083641.1	ILMN_1221269	007550040	S	1695	CCAGTCCTGGGCCCCATTCTGGAGGAGCAAGCGAGGCCCCCGCAGAATCT	7	-	52135937-52135986	7qB4	Mus musculus mediator of RNA polymerase II transcription, subunit 25 homolog (yeast) (Med25), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		2610529E18Rik; X83308; ESTM2; 2610034E13Rik	2610529E18Rik; X83308; ESTM2; 2610034E13Rik
Mus musculus	RefSeq	ILMN_209623	ILMN_209623	COG6	NM_026225.1	NM_026225.1		67542	30794457	NM_026225.1	Cog6	NP_080501.1	ILMN_2974945	007150768	S	2477	AGGCTGTTGTCCCTTCCTGCTTACTTTCATGCCTGGTGCAGGTTTGTATG	3	-	53070423-53070472	3qC	Mus musculus component of oligomeric golgi complex 6 (Cog6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		4933405E16Rik; mKIAA1134; AU018618	4933405E16Rik; mKIAA1134; AU018618
Mus musculus	MEEBO	ILMN_185274	ILMN_185274	6230409E13RIK	scl25623.7.1_15				31340678	NM_175234	6230409E13Rik		ILMN_2425657	003890717	S	18	TGTGGAGATGGATGACTACACAGACCACGAACAGTGCAAGTGATGCCCCA								Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221467	ILMN_221467	P4HB	NM_011032.2	NM_011032.2		18453	118130201	NM_011032.2	P4hb	NP_035162.1	ILMN_2735996	002680692	S	2290	AGGTCTGGACAGCTCTCACTCTCCTCAAGCCAGGACTACCGACCAGCCGG	11	-	120421816-120421865	11qE2	Mus musculus prolyl 4-hydroxylase, beta polypeptide (P4hb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The posttranslational modification of peptidyl-proline to form 4-hydroxy-L-proline; catalyzed by procollagen-proline,2-oxoglutarate-4-dioxygenase [goid 18401] [evidence ISO]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [evidence IEA]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2 [goid 4656] [evidence ISO]	PDI; ERp59; Thbp	PDI; ERp59; Thbp
Mus musculus	RefSeq	ILMN_201567	ILMN_201567	OLFR809	NM_146324.1	NM_146324.1		258321	22129644	NM_146324.1	Olfr809	NP_666436.1	ILMN_2542926	003180482	S	241	TTCTTAGAAATCTCATTTACTTCTGTCTGTAATCCTAGGTTTTTGGTCAG	10	+	129213167-129213216	10qD3	Mus musculus olfactory receptor 809 (Olfr809), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR108-4	MOR108-4
Mus musculus	RefSeq	ILMN_201567	ILMN_201567	OLFR809	NM_146324.1	NM_146324.1		258321	22129644	NM_146324.1	Olfr809	NP_666436.1	ILMN_2899625	006450093	S	487	CTGGCTGGTTTCTTGGTAGTTTTTCCTCCACTGGCCATGGGCTTAGATCT	10	+	129213413-129213462	10qD3	Mus musculus olfactory receptor 809 (Olfr809), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR108-4	MOR108-4
Mus musculus	RefSeq	ILMN_201567	ILMN_201567	OLFR809	NM_146324.1	NM_146324.1		258321	22129644	NM_146324.1	Olfr809	NP_666436.1	ILMN_2764512	006660450	S	920	CCAGCAGGTGAAACAAGCATTTAAGGATCTCGTGCGAAAAAAACTTGCTT	10	+	129213846-129213895	10qD3	Mus musculus olfactory receptor 809 (Olfr809), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR108-4	MOR108-4
Mus musculus	RefSeq	ILMN_211827	ILMN_211827	AP1M2	NM_009678.1	NM_009678.1		11768	6753071	NM_009678.1	Ap1m2	NP_033808.1	ILMN_2925872	005690554	S	1225	GCATCCAGGTCCGTTACATGAAGATCATCGAGAAAAGTGGGTACCAGGCC	9	-	21100910-21100952:21102644-21102650	9qA3	Mus musculus adaptor protein complex AP-1, mu 2 subunit (Ap1m2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D9Ertd818e; mu1B; [m]1B	D9Ertd818e; mu1B; [m]1B
Mus musculus	RefSeq	ILMN_211827	ILMN_211827	AP1M2	NM_009678.1	NM_009678.1		11768	6753071	NM_009678.1	Ap1m2	NP_033808.1	ILMN_2619877	001710358	S	884	CCTGATCTGGATCGAGTCAGTCATTGAGAAATTCTCGCACAGCCGAGTGG	9	-	21106913-21106962	9qA3	Mus musculus adaptor protein complex AP-1, mu 2 subunit (Ap1m2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D9Ertd818e; mu1B; [m]1B	D9Ertd818e; mu1B; [m]1B
Mus musculus	RefSeq	ILMN_211827	ILMN_211827	AP1M2	NM_009678.1	NM_009678.1		11768	6753071	NM_009678.1	Ap1m2	NP_033808.1	ILMN_2749011	003180491	S	1451	GACACATCCTTGGTGCCCACACCTAACCCCCTTTACCTCTATCAGCCATA	9	-	21100106-21100155	9qA3	Mus musculus adaptor protein complex AP-1, mu 2 subunit (Ap1m2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D9Ertd818e; mu1B; [m]1B	D9Ertd818e; mu1B; [m]1B
Mus musculus	RefSeq	ILMN_211827	ILMN_211827	AP1M2	NM_009678.1	NM_009678.1		11768	6753071	NM_009678.1	Ap1m2	NP_033808.1	ILMN_2762318	001820053	S	1536	ATGAAGAAATATAAGAGGGCCTGAACTCTGCTGCCCGGCCCGCCCCCCAT	9	-	21100021-21100070	9qA3	Mus musculus adaptor protein complex AP-1, mu 2 subunit (Ap1m2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D9Ertd818e; mu1B; [m]1B	D9Ertd818e; mu1B; [m]1B
Mus musculus	RefSeq	ILMN_210459	ILMN_210459	EGLN3	NM_028133.1	NM_028133.1		112407	15375329	NM_028133.1	Egln3	NP_082409.1	ILMN_2782101	003290575	S	2231	CCCACAAGCAGCATAGACCTGAAAGTGTTTTATTTCGTCATGTTCAGACA	12	-	55280337-55280386	12qC1	Mus musculus EGL nine homolog 3 (C. elegans) (Egln3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]	AI648162; 2610021G09Rik; AI505553; SM-20; Phd3	AI648162; 2610021G09Rik; AI505553; SM-20; Phd3
Mus musculus	RefSeq	ILMN_210459	ILMN_210459	EGLN3	NM_028133.1	NM_028133.1		112407	15375329	NM_028133.1	Egln3	NP_082409.1	ILMN_2605819	002750326	S	1890	CGTGTGTGTTCCCTTTAACGGTTCATCGTCCATAACAAAGAACAGTGTGC	12	-	55280678-55280727	12qC1	Mus musculus EGL nine homolog 3 (C. elegans) (Egln3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]	AI648162; 2610021G09Rik; AI505553; SM-20; Phd3	AI648162; 2610021G09Rik; AI505553; SM-20; Phd3
Mus musculus	RefSeq	ILMN_218639	ILMN_218639	HBEGF	NM_010415.1	NM_010415.1		15200	6754177	NM_010415.1	Hbegf	NP_034545.1	ILMN_2698449	006040364	S	1886	TGTGTCCTCTCCCTGCCAAATCCCAGAAGAGATTGAGCATCCATGCCTGC	18	-	36664989-36665038	18qB2	Mus musculus heparin-binding EGF-like growth factor (Hbegf), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The migration of epithelial cells along or through a wound gap to reestablish a continuous epithelium [goid 35313] [evidence IMP]; An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation [goid 1832] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of keratinocyte migration [goid 51549] [evidence IMP]; Any process that activates or increases the rate or extent of smooth muscle cell proliferation [goid 48661] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence NAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IDA]	DTS; MGC107656; Dtr; HB-EGF; Hegfl; AW047313	DTS; MGC107656; Dtr; HB-EGF; Hegfl; AW047313
Mus musculus	RefSeq	ILMN_235590	ILMN_235590	THOC6	NM_001008425.1	NM_001008425.1		386612	56605679	NM_001008425.1	Thoc6	NP_001008425.1	ILMN_2778428	003520711	S	1186	GCTGTCGAGTAGATGTCTTTACCAACCTGGGCTACCGAGCCTTCTCTTTG	17	-	23805781-23805830	17qA3.3	Mus musculus THO complex 6 homolog (Drosophila) (Thoc6), mRNA.				Wdr58; MGC107304; MGC109691; F830014G06Rik	Wdr58; MGC107304; MGC109691; F830014G06Rik
Mus musculus	RefSeq	ILMN_196328	ILMN_196328	RPL7L1	NM_025433.3	NM_025433.3		66229	118130326	NM_025433.3	Rpl7l1	NP_079709.2	ILMN_1249606	001660154	S	1111	AGCGGCGCACTTGAACATGGATCAAGAGGGTCCCGGTTTTACTTTTTATT	17	-	46912301-46912350	17qC	Mus musculus ribosomal protein L7-like 1 (Rpl7l1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1500016H10Rik	1500016H10Rik
Mus musculus	RefSeq	ILMN_196328	ILMN_196328	RPL7L1	NM_025433.3	NM_025433.3		66229	118130326	NM_025433.3	Rpl7l1	NP_079709.2	ILMN_2661407	000110750	S	2393	AGACAAAGATCGATGTATTAACGACCCCGACTCCAAAAACACTCGAGGGG	17	-	46911019-46911068	17qC	Mus musculus ribosomal protein L7-like 1 (Rpl7l1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1500016H10Rik	1500016H10Rik
Mus musculus	RefSeq	ILMN_223775	ILMN_223775	OLFR1427	NM_146679.1	NM_146679.1		258674	33239015	NM_146679.1	Olfr1427	NP_666890.1	ILMN_2768980	005670300	S	829	ATAATTGTTCCTGTCCTGAACCCAATGATCTACACCCTCAGGAACCAGGA	19	-	12173249-12173298	19qA	Mus musculus olfactory receptor 1427 (Olfr1427), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC157506; MOR239-4	MGC157506; MOR239-4
Mus musculus	RefSeq	ILMN_220067	ILMN_220067	SDF2	NM_009143.2	NM_009143.2		20316	40254616	NM_009143.2	Sdf2	NP_033169.2	ILMN_2791326	003310086	S	859	CATGAAGCCCAGTGAGTTGCTGAGGGCAGAGGTCCATCATGCAGAGCTGT	11	+	78064510-78064559	11qB5	Mus musculus stromal cell derived factor 2 (Sdf2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI853825; MGC107120	AI853825; MGC107120
Mus musculus	RefSeq	ILMN_220067	ILMN_220067	SDF2	NM_009143.2	NM_009143.2		20316	40254616	NM_009143.2	Sdf2	NP_033169.2	ILMN_2717199	005700717	S	544	GCCCATCCGTCTGACACACATCAACACAGGTCGAAACCTGCACAGCCACC	11	+	78059517-78059521:78059508-78059552	11qB5	Mus musculus stromal cell derived factor 2 (Sdf2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI853825; MGC107120	AI853825; MGC107120
Mus musculus	RefSeq	ILMN_212889	ILMN_212889	MLLT6	NM_139311.2	NM_139311.2		246198	118130867	NM_139311.2	Mllt6	NP_647472.2	ILMN_1218659	004670440	S	3588	CACTGGCTGCTTCAGAGGGTCGGGAGGACAGGCTCCTAGCCTGCCTAGGA	11	+	97543089-97543138	11qD	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 (Mllt6), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI315037	AI315037
Mus musculus	Riken	ILMN_202482	ILMN_202482	6430407D20RIK	ri|6430407D20|PX00044M14|AK018273|1697					AK018273	6430407D20Rik		ILMN_1239550	002190037	S	1501	GTCACTTGGAGTTTTCCCAACATGCTCTGGGTCTAGAAGCTGCCTCATTC										
Mus musculus	RefSeq	ILMN_211261	ILMN_240494	ACVR1C	NM_001033369.2	NM_001033369.2		269275	141802377	NM_001033369.2	Acvr1c	NP_001028541.1	ILMN_2614086	001010739	S	4031	CGTTTTGAGTTTGTAATCAGTACTGACTCTGTTGTATGCATCCTTCCACG	2	-	58124441-58124490	2qC1.1	Mus musculus activin A receptor, type IC (Acvr1c), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence ISO]; The proliferation of cells in the trophectoderm [goid 1834] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [evidence ISO]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	ACVRLK7; C230097P10; Alk-7; ALK7	ACVRLK7; C230097P10; Alk-7; ALK7
Mus musculus	RefSeq	ILMN_197052	ILMN_234253	SLC30A10	NM_001033286.2	NM_001033286.2		226781	84875509	NM_001033286.2	Slc30a10	NP_001028458.1	ILMN_1224416	004900398	S	380	AGGCCCACGCACAGCGAGATCAGGTCTGACAGCATGTTGAACGAGTCCGA	1	+	187279106-187279155	1qH5	Mus musculus solute carrier family 30, member 10 (Slc30a10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	E130106K10Rik; MGC118559; Gm212	E130106K10Rik; MGC118559; Gm212
Mus musculus	RefSeq	ILMN_234253	ILMN_234253	SLC30A10	NM_001033286.2	NM_001033286.2		226781	84875509	NM_001033286.2	Slc30a10	NP_001028458.1	ILMN_2812926	006770202	S	5511	GGGTTGACACGGGAGAGCCATCCTTTCCTGGAGGCTTGAGGTTATGTTAC	1	+	187292316-187292365	1qH5	Mus musculus solute carrier family 30, member 10 (Slc30a10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	E130106K10Rik; MGC118559; Gm212	E130106K10Rik; MGC118559; Gm212
Mus musculus	RefSeq	ILMN_187568	ILMN_234253	SLC30A10	NM_001033286.2	NM_001033286.2		226781	84875509	NM_001033286.2	Slc30a10	NP_001028458.1	ILMN_1243252	001690180	S	1555	TGTCCAAGGGAGCAGGGACAGACTCTCAGCAAGACTCAGGAGAGACAACA	1	+	187288360-187288409	1qH5	Mus musculus solute carrier family 30, member 10 (Slc30a10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	E130106K10Rik; MGC118559; Gm212	E130106K10Rik; MGC118559; Gm212
Mus musculus	RefSeq	ILMN_198368	ILMN_198368	LOC232077	XM_144880.5	XM_144880.5		232077	149255209	XM_144880.5	LOC232077	XP_144880.3	ILMN_2531440	002970681	S	1226	CAGCAGTGGGGACCAGAGCAGCCCCTTCAGCAGCCCTTTCTACAACTTCA	6	+	70910961-70911010	6qC1	PREDICTED: Mus musculus similar to hCG33270 (LOC232077), mRNA.					
Mus musculus	RefSeq	ILMN_214068	ILMN_214068	CD200R2	NM_206535.1	NM_206535.1		271375	45504372	NM_206535.1	Cd200r2	NP_996258.1	ILMN_2688182	004150309	S	379	GAGGCCAGCCTTCCTGCATAATGGCCTACAAAGTAGAAACAAAGGAGACC	16	+	44909262-44909311	16qB4	Mus musculus Cd200 receptor 2 (Cd200r2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	AY230198	AY230198
Mus musculus	RefSeq	ILMN_214068	ILMN_214068	CD200R2	NM_206535.1	NM_206535.1		271375	45504372	NM_206535.1	Cd200r2	NP_996258.1	ILMN_2688180	005220739	S	375	CCCAGAGGCCAGCCTTCCTGCATAATGGCCTACAAAGTAGAAACAAAGGA	16	+	44909258-44909307	16qB4	Mus musculus Cd200 receptor 2 (Cd200r2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	AY230198	AY230198
Mus musculus	RefSeq	ILMN_214068	ILMN_214068	CD200R2	NM_206535.1	NM_206535.1		271375	45504372	NM_206535.1	Cd200r2	NP_996258.1	ILMN_1239931	004180528	S	1638	CCTCATAGATGCAGGAGAAAGGAGAATGGAAGAGGGTATTCTGGAGGGGA	16	+	44915841-44915890	16qB4	Mus musculus Cd200 receptor 2 (Cd200r2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	AY230198	AY230198
Mus musculus	RefSeq	ILMN_259738	ILMN_259738	TDPOZ5	NM_207273.1	NM_207273.1		399676	46402302	NM_207273.1	Tdpoz5	NP_997156.1	ILMN_3079605	003520541	I	2	TGTCAGAGGACATGGAAGTCACGAACTGGGGCTACACACATATCAGTGTT	3	-	93765185-93765234	3qF2.1	Mus musculus TD and POZ domain containing 5 (Tdpoz5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_259738	ILMN_259738	TDPOZ5	NM_207273.1	NM_207273.1		399676	46402302	NM_207273.1	Tdpoz5	NP_997156.1	ILMN_3158889	001570092	A	767	GCCACTCCATGGCCACTGATGTGCTGACAGCTGCTGACAAGTATGGTCTG	3	-	93764420-93764469	3qF2.1	Mus musculus TD and POZ domain containing 5 (Tdpoz5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_218476	ILMN_218476	E130112H22RIK	scl077868.1_22	NM_175267.2			31341456	NM_175267.2	E130112H22Rik		ILMN_2734383	004230669	S	2550	GGTGAACTTGAACCACTGTGTATCCCGATTTTGCATTGAGCCGGGCCCTG										
Mus musculus	MEEBO	ILMN_218476	ILMN_218476	E130112H22RIK	scl077868.1_22	NM_175267.2			31341456	NM_175267.2	E130112H22Rik		ILMN_2734382	000870025	S	2549	CGGTGAACTTGAACCACTGTGTATCCCGATTTTGCATTGAGCCGGGCCCT										
Mus musculus	RefSeq	ILMN_189036	ILMN_189036	WDR12	NM_021312.4	NM_021312.4		57750	34328472	NM_021312.4	Wdr12	NP_067287.1	ILMN_1259912	000050731	S	2653	CACTAAAAGGTAGTGTGTATAAGAAAATAAGACTGTTGAGTGTTCAGAGC	1	-	60133908-60133957	1qC2	Mus musculus WD repeat domain 12 (Wdr12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ytm1p; Ytm1; 4933402C23Rik	Ytm1p; Ytm1; 4933402C23Rik
Mus musculus	RefSeq	ILMN_220218	ILMN_220218	LGI3	NM_145219.2	NM_145219.2		213469	31981755	NM_145219.2	Lgi3	NP_660254.1	ILMN_2994995	001660575	S	2743	TCAAGCTCGGGCCATCTCCTCTCTCACCCTATCTTTGAGATGCGGATCCC	14	+	69273015-69273064	14qD2	Mus musculus leucine-rich repeat LGI family, member 3 (Lgi3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW049851	AW049851
Mus musculus	RefSeq	ILMN_222272	ILMN_222272	ZFP747	NM_175560.3	NM_175560.3		269997	142361941	NM_175560.3	Zfp747	NP_780769.1	ILMN_1219375	005960450	S	2530	CAGATTATGGCAACAGCCCCCATGTCTTGATTTCAGCGTTGGAAGGAGAG	7	-	134516155-134516204	7qF3	Mus musculus zinc finger protein 747 (Zfp747), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208744	ILMN_208744	OLFR127	NM_146377.1	NM_146377.1		258374	22129546	NM_146377.1	Olfr127	NP_666489.1	ILMN_2589097	002140470	S	866	TCTATAGTCTAAGAAATGAGTCCTTGAAAAGAGCTGTAAAGAAGTTACTT	17	+	38041358-38041407	17qB1	Mus musculus olfactory receptor 127 (Olfr127), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR218-7	MOR218-7
Mus musculus	MEEBO	ILMN_219900	ILMN_219900	KLKB1	scl016621.1_40				6680583	NM_008455	Klkb1		ILMN_2775527	006180025	S	2410	GCGCCCGCAAGGACCAACCAGGAGTCTACACCAAAGTTTCTGAGTACATG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	An ongoing process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, resulting in the removal of small blood clots [goid 42730] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196553	ILMN_238713	HELZ	NM_198298.1	NM_198298.1		78455	50355942	NM_198298.1	Helz	NP_938040.1	ILMN_1245734	000540687	S	4827	AGTGAGGGCAGAGTGGAAAGTCGCCGGCAGGGCTGACGATGAAACAGAGA	11	+	107532533-107532582	11qE1	Mus musculus helicase with zinc finger domain (Helz), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	KIAA0054; 9630002H22Rik; AI851979; 9430093I07Rik; 3110078M01Rik; DRHC	KIAA0054; 9630002H22Rik; AI851979; 9430093I07Rik; 3110078M01Rik; DRHC
Mus musculus	RefSeq	ILMN_238713	ILMN_238713	HELZ	NM_198298.1	NM_198298.1		78455	50355942	NM_198298.1	Helz	NP_938040.1	ILMN_2948649	005310731	S	6024	CGGTTCCTGTCCAGTCTGCAGGATGGAGGTGGCGGCTCTGTGTGCGTGCA	11	+	107548063-107548112	11qE1	Mus musculus helicase with zinc finger domain (Helz), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	KIAA0054; 9630002H22Rik; AI851979; 9430093I07Rik; 3110078M01Rik; DRHC	KIAA0054; 9630002H22Rik; AI851979; 9430093I07Rik; 3110078M01Rik; DRHC
Mus musculus	RefSeq	ILMN_253679	ILMN_253679	STAM2	NM_019667.2	NM_019667.2		56324	31543774	NM_019667.2	Stam2	NP_062641.1	ILMN_2970381	003450280	S	3910	CATTTCCTTGGGTGTTAAGTGGAGTATGTTTGAAAAGTCAACAGTCAGCC	2	-	52547889-52547938	2qC1.1	Mus musculus signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 (Stam2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5730456G07Rik; Hbp; BB145015; 1200004O12Rik	5730456G07Rik; Hbp; BB145015; 1200004O12Rik
Mus musculus	RefSeq	ILMN_196297	ILMN_253679	STAM2	NM_019667.2	NM_019667.2		56324	31543774	NM_019667.2	Stam2	NP_062641.1	ILMN_1232608	003460687	S	286	ATTTCATTTAGAAGTATGTTCCCGTGATTTTGCAACGGAAGTACGTTCTG	2	-	52578744-52578793	2qC1.1	Mus musculus signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 (Stam2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5730456G07Rik; Hbp; BB145015; 1200004O12Rik	5730456G07Rik; Hbp; BB145015; 1200004O12Rik
Mus musculus	RefSeq	ILMN_217500	ILMN_217500	CDK9	NM_130860.2	NM_130860.2		107951	85662403	NM_130860.2	Cdk9	NP_570930.1	ILMN_2683933	006270139	S	988	TATGCTCTGGACCTCATTGACAAGCTGCTGGTGCTGGACCCCGCGCAGCG	2	-	32563654-32563703	2qB	Mus musculus cyclin-dependent kinase 9 (CDC2-related kinase) (Cdk9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a small nuclear RNA (snRNA) [goid 17069] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [evidence IEA]	PITALRE	PITALRE
Mus musculus	RefSeq	ILMN_216719	ILMN_216719	ENSMUSG00000053338	NM_177363.3	NM_177363.3		245126	142368146	NM_177363.3	ENSMUSG00000053338	NP_796337.1	ILMN_2674475	005050086	S	602	GGAGCTCAACAGGAATGGTATCAGACTTCTCTCTTCAGAATGTGACAGCC	7	-	3497649-3497698	7qA1	Mus musculus predicted gene, ENSMUSG00000053338 (ENSMUSG00000053338), mRNA.					
Mus musculus	RefSeq	ILMN_195843	ILMN_232687	SPNB1	NM_013675.3	NM_013675.3		20741	84490393	NM_013675.3	Spnb1	NP_038703.3	ILMN_2519255	004590333	S	10275	GATCTGTGCCCAACAGGGTTCCATCTCTCTACCTTCACTTCACTTTCTGT	12	-	77681544-77681593	12qC3	Mus musculus spectrin beta 1 (Spnb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]	mKIAA4219; ja; Gm1301; Spnb-1; jaundiced; KIAA4219; D330027P03Rik; AI842465	mKIAA4219; ja; Gm1301; Spnb-1; jaundiced; KIAA4219; D330027P03Rik; AI842465
Mus musculus	RefSeq	ILMN_199494	ILMN_232687	SPNB1	NM_013675.3	NM_013675.3		20741	84490393	NM_013675.3	Spnb1	NP_038703.3	ILMN_2535419	004290041	S	7321	CTACAAGGATGCTAAGAACCTGGCCCTTGGGGTGCCCTACCATGGAGAGG	12	-	77684822-77684871	12qC3	Mus musculus spectrin beta 1 (Spnb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]	mKIAA4219; ja; Gm1301; Spnb-1; jaundiced; KIAA4219; D330027P03Rik; AI842465	mKIAA4219; ja; Gm1301; Spnb-1; jaundiced; KIAA4219; D330027P03Rik; AI842465
Mus musculus	RefSeq	ILMN_232687	ILMN_232687	SPNB1	NM_013675.3	NM_013675.3		20741	84490393	NM_013675.3	Spnb1	NP_038703.3	ILMN_2909238	005560450	S	10303	GGCTGGGCCTTGTCCTCCACCTGCTCAAATGTGCTTCCACCAACCAGAAG	12	-	77681516-77681565	12qC3	Mus musculus spectrin beta 1 (Spnb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]	mKIAA4219; ja; Gm1301; Spnb-1; jaundiced; KIAA4219; D330027P03Rik; AI842465	mKIAA4219; ja; Gm1301; Spnb-1; jaundiced; KIAA4219; D330027P03Rik; AI842465
Mus musculus	RefSeq	ILMN_184634	ILMN_227604	DMBX1	NM_130865.3	NM_130865.3		140477	70909342	NM_130865.3	Dmbx1	NP_570935.3	ILMN_2420260	001190754	S	3308	AGCCTTCCCAACCTCCTAAAGAGCAAGGCCACCTGAGGTCATATCTGGTC	4	-	115588398-115588447	4qD1	Mus musculus diencephalon/mesencephalon homeobox 1 (Dmbx1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IGI]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 15314164] [evidence IEP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12055180] [evidence IEP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [pmid 15314164] [evidence IEP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Otx3; Mbx; Cdmx; Atx	Otx3; Mbx; Cdmx; Atx
Mus musculus	RefSeq	ILMN_227604	ILMN_227604	DMBX1	NM_130865.3	NM_130865.3		140477	70909342	NM_130865.3	Dmbx1	NP_570935.3	ILMN_3140871	000540364	A	3704	AGAGCATGGTTCAGGGGCCTGGGTCCCCATTTCTATGCAGAGGCTGACTG	4	-	115588002-115588051	4qD1	Mus musculus diencephalon/mesencephalon homeobox 1 (Dmbx1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IGI]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 15314164] [evidence IEP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12055180] [evidence IEP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [pmid 15314164] [evidence IEP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Otx3; Mbx; Cdmx; Atx	Otx3; Mbx; Cdmx; Atx
Mus musculus	RefSeq	ILMN_200992	ILMN_200992	LOC381941	XM_355965.1	XM_355965.1			38087793	XM_355965.1	LOC381941		ILMN_1219503	006400653	S	1233	GGAGGGGCTGACCGGCTGATCCACCTCTGGAATGTTGTAGGAGGTAGGTA										
Mus musculus	Riken	ILMN_204734	ILMN_204734	ATP2B2	ri|B930050L17|PX00163N08|AK047336|2334					AK047336	Atp2b2		ILMN_1242383	001230609	S	1868	GACGAGAAGCAGGCATGCCGCAGGTTGCCTCCAGAAGCACTCTGTACATT						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate [goid 46068] [evidence IMP]; The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42428] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The precipitation of specific crystal forms of calcium carbonate with extracellular matrix proteins in the otolith organs of the vertebrate inner ear [goid 45299] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the size of a cell [goid 8361] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IMP]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structure of the cerebellar Purkinje cell layer is generated and organized. Morphogenesis pertains to the creation of form. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21692] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51928] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of calcium ion (Ca2+) [goid 30899] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of calcium (Ca) ions from one side of a membrane to the other [goid 15085] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199681	ILMN_199681	LOC382879	XM_356726.1	XM_356726.1			38075974	XM_356726.1	LOC382879		ILMN_1222848	001940746	S	428	TCCACCAGGTAGCAGTGCTAAGGCACCTGGAGAATTGGAGCACCCCAACA										
Mus musculus	RefSeq	ILMN_216255	ILMN_216255	NOLA3	NM_025403.1	NM_025403.1		66181	13384789	NM_025403.1	Nola3	NP_079679.1	ILMN_2997106	002760575	S	479	TGTTGGAGGAAGAGATGGGGGAAGGGTAGTACCGTTGGTAGTACAAGGCC	2	+	112063521-112063570	2qE3	Mus musculus nucleolar protein family A, member 3 (Nola3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	NOP10; 1110036B12Rik; NOP10P	NOP10; 1110036B12Rik; NOP10P
Mus musculus	RefSeq	ILMN_214970	ILMN_253855	SESN1	NM_001013370.1	NM_001013370.1		140742	71480143	NM_001013370.1	Sesn1	NP_001013388.1	ILMN_2654074	006020609	S	2351	CCCATGCCCTGCTGACCTCGGGACCCTGACTTTGAAGGTTATACAGCTCC	10	+	41627991-41628040	10qB2	Mus musculus sestrin 1 (Sesn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		SEST1; AU044290; MGC118148; 1110002G11Rik; PA26	SEST1; AU044290; MGC118148; 1110002G11Rik; PA26
Mus musculus	RefSeq	ILMN_253855	ILMN_253855	SESN1	NM_001013370.1	NM_001013370.1		140742	71480143	NM_001013370.1	Sesn1	NP_001013388.1	ILMN_3059476	002970025	I	63	GTCGAACGAGGCGTACGCAGCCTCGCTGGCTGTCTCCGAGCTGCTGAGCT	10	+	41607317-41607366	10qB2	Mus musculus sestrin 1 (Sesn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		SEST1; AU044290; MGC118148; 1110002G11Rik; PA26	SEST1; AU044290; MGC118148; 1110002G11Rik; PA26
Mus musculus	RefSeq	ILMN_253855	ILMN_253855	SESN1	NM_001013370.1	NM_001013370.1		140742	71480143	NM_001013370.1	Sesn1	NP_001013388.1	ILMN_3136744	002480475	A	2281	GGTTCCGGTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGG	10	+	41627921-41627970	10qB2	Mus musculus sestrin 1 (Sesn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		SEST1; AU044290; MGC118148; 1110002G11Rik; PA26	SEST1; AU044290; MGC118148; 1110002G11Rik; PA26
Mus musculus	RefSeq	ILMN_199910	ILMN_199910	LOC381562	XM_355527.1	XM_355527.1			38078915	XM_355527.1	LOC381562		ILMN_1224961	006650164	S	1611	TCCCAAACTGGGGCCTGGCAAAGGGTGTGTGTCTGCCTGCAAGCTCCATT										
Mus musculus	RefSeq	ILMN_189042	ILMN_246511	SIN3B	NM_009188.2	NM_009188.2		20467	94158896	NM_009188.2	Sin3b	NP_033214.1	ILMN_2749818	002940687	S	2808	GGGGTCTGAGGGTGCATCCAGCTCATCTACTGAAGGCTTCCTGCTGAAGC	8	+	75280401-75280450	8qB3.3	Mus musculus transcriptional regulator, SIN3B (yeast) (Sin3b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1741] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any chromosome other than a sex chromosome [goid 30849] [evidence IDA]; The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males [goid 805] [evidence IDA]; The sex chromosome present in males of species in which the male is the heterogametic sex; generally, the sex chromosome that pairs with the X chromosome in the heterogametic sex. The Y chromosome is absent from the cells of females and present in one copy in the somatic cells of males [goid 806] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	2810430C10Rik	2810430C10Rik
Mus musculus	RefSeq	ILMN_220521	ILMN_220521	MRPS31	NM_020560.1	NM_020560.1		57312	10181115	NM_020560.1	Mrps31	NP_065585.1	ILMN_2723162	004120561	S	1151	TTAATGAAAAAAGAGATATTCTCAAAGAAAATAATATAGCGTTCACTTAA	8	+	23539832-23539881	8qA2	Mus musculus mitochondrial ribosomal protein S31 (Mrps31), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			Imogen44; AA960481; 1500002D03Rik; Imogen38	Imogen44; AA960481; 1500002D03Rik; Imogen38
Mus musculus	RefSeq	ILMN_220521	ILMN_220521	MRPS31	NM_020560.1	NM_020560.1		57312	10181115	NM_020560.1	Mrps31	NP_065585.1	ILMN_2829295	002190626	S	1040	AGCAAGGACCAATCCGTCTGTTCATGGAGCTGGTGACCTGTGGCCTTTCC	8	+	23539721-23539770	8qA2	Mus musculus mitochondrial ribosomal protein S31 (Mrps31), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			Imogen44; AA960481; 1500002D03Rik; Imogen38	Imogen44; AA960481; 1500002D03Rik; Imogen38
Mus musculus	RefSeq	ILMN_220521	ILMN_220521	MRPS31	NM_020560.1	NM_020560.1		57312	10181115	NM_020560.1	Mrps31	NP_065585.1	ILMN_2736094	001410278	S	487	GCGTCGGCTGTTGCAGATTCCCTACCTTTTGACAAGCAGACAACCAAGTC	8	+	23530232-23530281	8qA2	Mus musculus mitochondrial ribosomal protein S31 (Mrps31), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			Imogen44; AA960481; 1500002D03Rik; Imogen38	Imogen44; AA960481; 1500002D03Rik; Imogen38
Mus musculus	RefSeq	ILMN_220521	ILMN_220521	MRPS31	NM_020560.1	NM_020560.1		57312	10181115	NM_020560.1	Mrps31	NP_065585.1	ILMN_2732565	005720167	S	864	GCAGTTAGCCTCGGTAGCTGACCAGCCCTTTGAGAATGGATTTGAGGAGA	8	+	23538256-23538305	8qA2	Mus musculus mitochondrial ribosomal protein S31 (Mrps31), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			Imogen44; AA960481; 1500002D03Rik; Imogen38	Imogen44; AA960481; 1500002D03Rik; Imogen38
Mus musculus	RefSeq	ILMN_233658	ILMN_233658	RPS5	NM_009095.1	NM_009095.1		20103	6677806	NM_009095.1	Rps5	NP_033121.1	ILMN_2808946	006400681	S	407	TGCTATCATCAACAGTGGCCCCCGAGAAGACTCAACACGCATTGGGCGGG	7	+	13511121-13511170	7qA1	Mus musculus ribosomal protein S5 (Rps5), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	AA617411	AA617411
Mus musculus	RefSeq	ILMN_208631	ILMN_208631	GLUL	NM_008131.3	NM_008131.3		14645	118130944	NM_008131.3	Glul	NP_032157.2	ILMN_2644496	007570528	S	2694	GCCAGGCAGCGCTTATAAATCAACCTAACATTTATAAGATTTCCTCTGAC	1	+	155756756-155756805	1qG3	Mus musculus glutamate-ammonia ligase (glutamine synthetase) (Glul), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6542] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IMP]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine [goid 4356] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	GS; Glns	GS; Glns
Mus musculus	RefSeq	ILMN_240136	ILMN_240136	KCNK6	NM_001033525.1	NM_001033525.1		52150	84370289	NM_001033525.1	Kcnk6	NP_001028697.1	ILMN_3049650	007320703	I	3700	GTGAGTCTTCCACCCTACACAAAGGGTTACCAGCAATGGGAAGTGATGAC	7	-	28930998-28931047	7qB1	Mus musculus potassium inwardly-rectifying channel, subfamily K, member 6 (Kcnk6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	D7Ertd764e; Toss; Twik2	D7Ertd764e; Toss; Twik2
Mus musculus	RefSeq	ILMN_240136	ILMN_240136	KCNK6	NM_001033525.1	NM_001033525.1		52150	84370289	NM_001033525.1	Kcnk6	NP_001028697.1	ILMN_3125634	006510026	A	781	CCGTGTTTCCGACCTCCATGGCCTCACAGAACTCATCTTGCTGCCCGATC	7	-	28933917-28933966	7qB1	Mus musculus potassium inwardly-rectifying channel, subfamily K, member 6 (Kcnk6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	D7Ertd764e; Toss; Twik2	D7Ertd764e; Toss; Twik2
Mus musculus	MEEBO	ILMN_214269	ILMN_214269	4930424G05RIK	scl18750.7.1_9	NM_026251.1			21312905	NM_026251.1	4930424G05Rik		ILMN_2646179	000110382	S	1576	AGTGCTGTCTGTGAGGAAAGGGAAAGTTTTGGTGGCTCGGCTGCTCCCCT										
Mus musculus	RefSeq	ILMN_213473	ILMN_213473	FBLN7	NM_024237.4	NM_024237.4		70370	146134427	NM_024237.4	Fbln7	NP_077199.2	ILMN_2637357	000270156	S	1321	ACAGGAGAGCTCATCCTTACACAGACCCTGGAGGGGCCTCAGACTCTGGA				2qF1	Mus musculus fibulin 7 (Fbln7), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	AI464334	AI464334
Mus musculus	RefSeq	ILMN_198553	ILMN_256165	EG333830	XM_987385.1	XM_987385.1		333830	94407184	XM_987385.1	EG333830	XP_992479.1	ILMN_2532099	005340133	S	283	AGGAGGATTCTGCCCCAGCCAATCCGGAAAAGCCAGATGAAAAATAAGCA				XqA4	PREDICTED: Mus musculus predicted gene, EG333830 (EG333830), mRNA.					
Mus musculus	RefSeq	ILMN_191778	ILMN_238545	BLM	NM_007550.3	NM_007550.3		12144	110225361	NM_007550.3	Blm	NP_031576.3	ILMN_2774640	004850669	S	4584	CTTCTCCTAACAGTTCTCTGCGCATAGATCTTGTTTGTCAGCATCTGACC	7	-	87600104-87600144:87600145-87600153	7qD3	Mus musculus Bloom syndrome homolog (human) (Blm), transcript variant 1, mRNA.	The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IGI]; Any process that inhibits or decreases the rate of DNA recombination during mitosis [goid 45950] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of an alpha-beta T cell [goid 46632] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IMP]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51098] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate; drives the unwinding of the DNA helix in the direction 3' to 5' [goid 43140] [evidence IDA]		
Mus musculus	RefSeq	ILMN_191778	ILMN_238545	BLM	NM_007550.3	NM_007550.3		12144	110225361	NM_007550.3	Blm	NP_031576.3	ILMN_2706070	000830465	S	355	CCTCTGAACAATCTACAAGAACAACTACAGCGACACTCAGCCAGAAAACT	7	-	87659510-87659559	7qD3	Mus musculus Bloom syndrome homolog (human) (Blm), transcript variant 1, mRNA.	The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IGI]; Any process that inhibits or decreases the rate of DNA recombination during mitosis [goid 45950] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of an alpha-beta T cell [goid 46632] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IMP]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51098] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate; drives the unwinding of the DNA helix in the direction 3' to 5' [goid 43140] [evidence IDA]		
Mus musculus	RefSeq	ILMN_195322	ILMN_245845	COPS2	NM_009939.2	NM_009939.2		12848	70909326	NM_009939.2	Cops2	NP_034069.2	ILMN_2740523	004280458	S	1879	GACAACCCGAATTCTCAGTGGCACGCTGTCACCTAGGGCTCAAGCAGCAA	2	-	125657361-125657410	2qF1	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) (Cops2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI315723; Trip15; Csn2; Sgn2; alien-like; C85265	AI315723; Trip15; Csn2; Sgn2; alien-like; C85265
Mus musculus	RefSeq	ILMN_195322	ILMN_245845	COPS2	NM_009939.2	NM_009939.2		12848	70909326	NM_009939.2	Cops2	NP_034069.2	ILMN_2514543	005130309	S	2969	AAGCAGTCAGTTAATGTCTAGCAGAATAAAGCAGTATTAAATACAGATAT	2	-	125656271-125656320	2qF1	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) (Cops2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI315723; Trip15; Csn2; Sgn2; alien-like; C85265	AI315723; Trip15; Csn2; Sgn2; alien-like; C85265
Mus musculus	RefSeq	ILMN_199240	ILMN_199240	LOC380741	XM_358416.1	XM_358416.1			38092584	XM_358416.1	LOC380741		ILMN_1220535	004210546	S	927	GCTCCCGGGCGAAATCGGAGACAATTTCAACTCTGAGAGGAGCAACCCAG										
Mus musculus	MEEBO	ILMN_191505	ILMN_191505	A630057J21RIK	scl32279.1.1_3						A630057J21Rik		ILMN_1222357	001570500	S	20	CCATAGTCTTTCTCCCTGAGATTTAGATCTTGACTACTCTATTTTCTCTC										
Mus musculus	RefSeq	ILMN_191715	ILMN_254475	PPIL6	XM_994766.1	XM_994766.1		73075	94389140	XM_994766.1	Ppil6	XP_999860.1	ILMN_2481541	006400554	S	794	GCCATCACACCAATGGGTCACAATTTTACATCACACTACAGGCAGCTCCC				10qB2	PREDICTED: Mus musculus peptidylprolyl isomerase (cyclophilin)-like 6, transcript variant 2 (Ppil6), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201578	ILMN_257170	SLA2	NM_029983.4	NM_029983.4		77799	148540051	NM_029983.4	Sla2	NP_084259.1	ILMN_1236595	003830504	S	631	CGACTCAGCCGCCCTGCATCTTGGGACCGGATCAGACACTACAGGATACA				2qH1	Mus musculus Src-like-adaptor 2 (Sla2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence ISS]	A930009E21Rik; SLAP2; AI430952; SLAP-2	A930009E21Rik; SLAP2; AI430952; SLAP-2
Mus musculus	RefSeq	ILMN_185217	ILMN_228032	ZKSCAN5	NM_016683.1	NM_016683.1		22757	46409653	NM_016683.1	Zkscan5	NP_057892.1	ILMN_2490607	002120370	S	748	TGGGCACATTTGGACCAGTCCCAGAAGTCTCTCGGTAGGGACAGCAGAAA	5	+	145973440-145973489	5qG2	Mus musculus zinc finger with KRAB and SCAN domains 5 (Zkscan5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	hKraba1; AI132486; AI326970; Zfp95	hKraba1; AI132486; AI326970; Zfp95
Mus musculus	RefSeq	ILMN_185217	ILMN_228032	ZKSCAN5	NM_016683.1	NM_016683.1		22757	46409653	NM_016683.1	Zkscan5	NP_057892.1	ILMN_1212646	004230494	S	3057	CTGCCCCAGCCACTGGAGTACTCTAGCCATTGTCCCATCCTGTTTATTAA	5	+	145982564-145982613	5qG2	Mus musculus zinc finger with KRAB and SCAN domains 5 (Zkscan5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	hKraba1; AI132486; AI326970; Zfp95	hKraba1; AI132486; AI326970; Zfp95
Mus musculus	RefSeq	ILMN_185891	ILMN_232533	1600021P15RIK	NM_177718.3	NM_177718.3		239796	86262156	NM_177718.3	1600021P15Rik	NP_808386.2	ILMN_1212632	004670204	S	1434	GGGAAGTCCATCTCGGTCTTTATTAACCCCGATGACGTCACGAGGCCCCA	16	-	28827858-28827907	16qB2	Mus musculus RIKEN cDNA 1600021P15 gene (1600021P15Rik), mRNA.				A430031N04; C87006; MGC103296	A430031N04; C87006; MGC103296
Mus musculus	RefSeq	ILMN_188587	ILMN_232533	1600021P15RIK	NM_177718.3	NM_177718.3		239796	86262156	NM_177718.3	1600021P15Rik	NP_808386.2	ILMN_2453954	006280386	S	2828	AGGCAAACCGTGGTGCTTGAGTCGTGGACGGCCCTGCTGACATAGATGAC	16	-	28826464-28826513	16qB2	Mus musculus RIKEN cDNA 1600021P15 gene (1600021P15Rik), mRNA.				A430031N04; C87006; MGC103296	A430031N04; C87006; MGC103296
Mus musculus	RefSeq	ILMN_222534	ILMN_222534	OLFR1130	NM_146838.1	NM_146838.1		258835	22129186	NM_146838.1	Olfr1130	NP_667049.1	ILMN_2751029	002900358	S	861	GACTCCCATGTTAAATCCTCTGATATACAGTCTTAGAAACAAGGAGGTGA	2	+	87448407-87448456	2qD	Mus musculus olfactory receptor 1130 (Olfr1130), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR264-4	MOR264-4
Mus musculus	RefSeq	ILMN_213831	ILMN_213831	HSPA12B	NM_028306.3	NM_028306.3		72630	118130472	NM_028306.3	Hspa12b	NP_082582.1	ILMN_2641228	003290315	S	2867	GCCAACCATGGCGTAAGACAGCTTTCCCTGCCTGAGAACTTATCCTAAGG	2	+	130971643-130971692	2qF1	Mus musculus heat shock protein 12B (Hspa12b), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2700081N06Rik	2700081N06Rik
Mus musculus	Riken	ILMN_204886	ILMN_204886	NPR3	ri|A530014A01|PX00140G17|AK040677|2534					AK040677	Npr3		ILMN_2568364	006330082	S	2137	AACCTAGAAAGGCGGTGACCTTGGTACAGTGGCCTAGGGTGAGAGGCCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212446	ILMN_261882	PMM2	NM_016881.2	NM_016881.2		54128	133892745	NM_016881.2	Pmm2	NP_058577.1	ILMN_1219568	000110474	S	422	CCGAAATGGCATGTTGAATGTGTCCCCAATTGGAAGAAGCTGCAGCCAAG	16	+	8648759-8648808	16qA1	Mus musculus phosphomannomutase 2 (Pmm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose [goid 19307] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-mannose 1-phosphate = D-mannose 6-phosphate [goid 4615] [evidence IEA]	C86848; AI585868	C86848; AI585868
Mus musculus	RefSeq	ILMN_212446	ILMN_261882	PMM2	NM_016881.2	NM_016881.2		54128	133892745	NM_016881.2	Pmm2	NP_058577.1	ILMN_2626547	000050544	S	255	GTGTTTCCAGAGAATGGCTTGGTAGCGTACAAAGATGGGAAGCTATTGTG	16	+	8645482-8645531	16qA1	Mus musculus phosphomannomutase 2 (Pmm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose [goid 19307] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-mannose 1-phosphate = D-mannose 6-phosphate [goid 4615] [evidence IEA]	C86848; AI585868	C86848; AI585868
Mus musculus	RefSeq	ILMN_212446	ILMN_261882	PMM2	NM_016881.2	NM_016881.2		54128	133892745	NM_016881.2	Pmm2	NP_058577.1	ILMN_1221673	005700102	S	144	GGCTTTCTACAAAAATTGAGGCAGAAGACCAAAATTGGAGTGGTAGGTGG	16	+	8642852-8642901	16qA1	Mus musculus phosphomannomutase 2 (Pmm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose [goid 19307] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-mannose 1-phosphate = D-mannose 6-phosphate [goid 4615] [evidence IEA]	C86848; AI585868	C86848; AI585868
Mus musculus	RefSeq	ILMN_234235	ILMN_234235	MAP2K7	NM_001042557.1	NM_001042557.1		26400	110347548	NM_001042557.1	Map2k7	NP_001036022.1	ILMN_3102163	001500445	A	1254	GGTGGATGTCGCGTCCTGGTTTAAGGATGTCATGGCGAAGACCGAGTCCC	8	+	4245730-4245779	8qA1.1	Mus musculus mitogen-activated protein kinase kinase 7 (Map2k7), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A series of molecular signals in which a stress-activated MAP kinase cascade relays one or more of the signals; MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase [goid 51403] [evidence IDA]	Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MKK7; 5930412N11Rik; Jnkk2; Prkmk7; sek2	MKK7; 5930412N11Rik; Jnkk2; Prkmk7; sek2
Mus musculus	RefSeq	ILMN_234235	ILMN_234235	MAP2K7	NM_001042557.1	NM_001042557.1		26400	110347548	NM_001042557.1	Map2k7	NP_001036022.1	ILMN_3028981	003710215	I	1390	AAGTCCTTCCCTCTGTCACCAGCCATCCCTCAGGCCCAGGCAGAGTGGGT	8	+	4247697-4247746	8qA1.1	Mus musculus mitogen-activated protein kinase kinase 7 (Map2k7), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A series of molecular signals in which a stress-activated MAP kinase cascade relays one or more of the signals; MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase [goid 51403] [evidence IDA]	Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MKK7; 5930412N11Rik; Jnkk2; Prkmk7; sek2	MKK7; 5930412N11Rik; Jnkk2; Prkmk7; sek2
Mus musculus	RefSeq	ILMN_220904	ILMN_220904	LSM8	NM_133939.1	NM_133939.1		76522	19527155	NM_133939.1	Lsm8	NP_598700.1	ILMN_2883907	006380626	S	320	TGAAGAGACGGATTCTGCACTCGACTTGGGGAACATCCGAGCAGAGCCTC	6	+	18803622-18803671	6qA2	Mus musculus LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	2010003I05Rik; AW214405	2010003I05Rik; AW214405
Mus musculus	RefSeq	ILMN_223658	ILMN_223658	CD5L	NM_009690.1	NM_009690.1		11801	6753091	NM_009690.1	Cd5l	NP_033820.1	ILMN_2767236	000290731	S	1498	AAATGCTTTTTAAACTTTGTAACAAGTGAAGTGATCATAATAATAACACT	3	+	87174551-87174600	3qF1	Mus musculus CD5 antigen-like (Cd5l), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	Pdp 1/6; AAC-11; Sp-alpha; Api6; AI047839	Pdp 1/6; AAC-11; Sp-alpha; Api6; AI047839
Mus musculus	RefSeq	ILMN_211522	ILMN_211522	BC034090	XM_148974.6	XM_148974.6		207792	94364024	XM_148974.6	BC034090	XP_148974.3	ILMN_1254671	007150288	S	4497	GGGGACGCTAGATGCCTGGACAGGCGTCAGTCTTAAATTATTAAAAAGCC	1	-	157059619-157059668	1qG3	PREDICTED: Mus musculus cDNA sequence BC034090, transcript variant 1 (BC034090), mRNA.					
Mus musculus	RefSeq	ILMN_224685	ILMN_224685	PPP1R14D	NM_028104.2	NM_028104.2		72112	19920330	NM_028104.2	Ppp1r14d	NP_082380.1	ILMN_2872371	000770494	S	396	ACACAGCTGGAGGCCATTCTCCAAGACTGCCCAGGCAACAGAGAGCCTTT	2	-	119044142-119044159:119044362-119044393	2qE5	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 14D (Ppp1r14d), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2010107K19Rik; Ppp1r14	2010107K19Rik; Ppp1r14
Mus musculus	RefSeq	ILMN_215806	ILMN_215806	CSNK1G3	NM_152809.2	NM_152809.2		70425	113462018	NM_152809.2	Csnk1g3	NP_690022.2	ILMN_2793946	004880600	S	4086	GGCACACAGACTGGTCAGTAATAGGTGATGCAGGTATGTCCAGGTTAAGC	18	+	54115030-54115079	18qD1-qD2	Mus musculus casein kinase 1, gamma 3 (Csnk1g3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	C330049O21Rik; 3300002K07Rik	C330049O21Rik; 3300002K07Rik
Mus musculus	RefSeq	ILMN_210976	ILMN_210976	EIF4G2	NM_013507.3	NM_013507.3		13690	110630013	NM_013507.3	Eif4g2	NP_038535.2	ILMN_2625167	002810156	S	3480	TTCTTAACTGTAATTGATGGTTGTTGCCGTAATAGTATATTGCCTGTATT	7	-	118215729-118215778	7qF1	Mus musculus eukaryotic translation initiation factor 4, gamma 2 (Eif4g2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IDA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA589388; p97; DAP-5; Nat1; Natm1; E130105L11Rik	AA589388; p97; DAP-5; Nat1; Natm1; E130105L11Rik
Mus musculus	RefSeq	ILMN_189063	ILMN_210976	EIF4G2	NM_013507.3	NM_013507.3		13690	110630013	NM_013507.3	Eif4g2	NP_038535.2	ILMN_2458030	001570333	S	4366	GGCCTTTCTCTGCTGGGACAGTGAGAATGTTTGTGTCAAAGTCTGCTGCA	7	-	118214843-118214892	7qF1	Mus musculus eukaryotic translation initiation factor 4, gamma 2 (Eif4g2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IDA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA589388; p97; DAP-5; Nat1; Natm1; E130105L11Rik	AA589388; p97; DAP-5; Nat1; Natm1; E130105L11Rik
Mus musculus	RefSeq	ILMN_200738	ILMN_200738	LOC384521	XM_357687.1	XM_357687.1			38085718	XM_357687.1	LOC384521		ILMN_1259601	003140189	S	36	CTGTGGATGTGGTAAGCCTGAGGTTCCTGCACAAAATTCTCCAAGCGGAG										
Mus musculus	RefSeq	ILMN_214928	ILMN_214928	GZMB	NM_013542.2	NM_013542.2		14939	133892516	NM_013542.2	Gzmb	NP_038570.1	ILMN_2653555	002230189	S	1314	TAATTTCCTTATCAAATGACATCTTTTAATTTTTACATTAATGGCTTATT	14	-	56877747-56877796	14qC3	Mus musculus granzyme B (Gzmb), mRNA.		The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA];  [goid 8626] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ctla-1; Ctla1; AI553453; CCP1; CCP-1/C11	Ctla-1; Ctla1; AI553453; CCP1; CCP-1/C11
Mus musculus	RefSeq	ILMN_260158	ILMN_260158	OLFR1302	NM_146889.1	NM_146889.1		258891	22129104	NM_146889.1	Olfr1302	NP_667100.1	ILMN_2865421	006060056	S	898	GCTATGAGACGGTTCATAAACAACTACATGGATTCCCAAGGGAAGTCCTA	2	+	111621367-111621416	2qE3	Mus musculus olfactory receptor 1302 (Olfr1302), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR248-3	MOR248-3
Mus musculus	RefSeq	ILMN_224289	ILMN_248609	MUP3	NM_001039544.1	NM_001039544.1		17842	88196795	NM_001039544.1	Mup3	NP_001034633.1	ILMN_1213817	001780392	S	834	CTTTGCCAACACATGGAAATTCTCCATTGATTTCTTTCCTGTCCTGTTCA	4	-	61744534-61744583	4qB3	Mus musculus major urinary protein 3 (Mup3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MUP III; Mup-3; MUP15; MGC117854	MUP III; Mup-3; MUP15; MGC117854
Mus musculus	RefSeq	ILMN_214493	ILMN_214493	2310079F23RIK	NM_030208.1	NM_030208.1		78890	21313517	NM_030208.1	2310079F23Rik	NP_084484.1	ILMN_2990041	001190397	S	2413	GCAGCATGGTCACAGGATCGCTGCAAGCAGAGGCACAGGGCTTTCTGAAG	5	-	35874381-35874430	5qB3	Mus musculus RIKEN cDNA 2310079F23 gene (2310079F23Rik), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	Riken	ILMN_206426	ILMN_206426	C230040D17RIK	ri|C230040D17|PX00175A15|AK082352|2631					AK082352	C230040D17Rik		ILMN_1222597	000010059	S	2313	CATCCCTGTAACTCCTGGCATTGCTGTCAAGCCTGTTTAGAAAGCTACCC										
Mus musculus	RefSeq	ILMN_221897	ILMN_221897	SPIRE1	NM_176832.2	NM_176832.2		68166	116686107	NM_176832.2	Spire1	NP_789802.1	ILMN_3115149	005130382	A	4477	CCACTGACTGGGCTCTGACCTGGCTTCCCAAATGTAAGCAGAGAATGGCT	18	-	67648097-67648146	18qE1	Mus musculus spire homolog 1 (Drosophila) (Spire1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles [goid 48193] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU022898; AW550622; Spir-1; AI415299; 6030430B19Rik	AU022898; AW550622; Spir-1; AI415299; 6030430B19Rik
Mus musculus	Riken	ILMN_205757	ILMN_205757	A630024K09RIK	ri|A630024K09|PX00144H09|AK041609|2355					AK041609	A630024K09Rik		ILMN_2574997	003610626	S	2061	CTCAGTTATCAGGACCTTCTTGTAGATGGGTAGGTTGGTTCTGAGGATTG										
Mus musculus	RefSeq	ILMN_217171	ILMN_217171	PDHA1	NM_008810.2	NM_008810.2		18597	31543467	NM_008810.2	Pdha1	NP_032836.1	ILMN_2679851	002340259	S	2339	CAACCCTAAGCTGTCGGGGAGGCTCTCTTACCGTAGTCGGAGGCACCTTA	X	-	156560523-156560572	XqF4	Mus musculus pyruvate dehydrogenase E1 alpha 1 (Pdha1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]; Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2 [goid 4739] [evidence IEA]; Catalysis of the oxidative decarboxylation of pyruvate [goid 4738] [evidence IMP]	Pdha-1	Pdha-1
Mus musculus	RefSeq	ILMN_198317	ILMN_261032	YTHDC2	XM_910737.2	XM_910737.2		240255	94404854	XM_910737.2	Ythdc2	XP_915830.1	ILMN_1235880	007650424	S	1568	CAACAGCTCTGATGGTTGCTGCAGGACGGGGCTTTACGAGCCAAGTAGAG				18qB3	PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA.					
Mus musculus	RefSeq	ILMN_185371	ILMN_261032	YTHDC2	XM_910737.2	XM_910737.2		240255	94404854	XM_910737.2	Ythdc2	XP_915830.1	ILMN_2426491	006510273	S	5761	AATCATGGATTGGCATGAAGTCTTGAGAACTCTTCTACTTTCTCTGTGAA				18qB3	PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA.					
Mus musculus	RefSeq	ILMN_200811	ILMN_200811	LOC384597	XM_357736.1	XM_357736.1			38086284	XM_357736.1	LOC384597		ILMN_2540092	001010113	S	304	CGCATGCAGGACTGTCAGCGAGAGCTGCAGAGCCTACTGGTGGAGGAGGT										
Mus musculus	RefSeq	ILMN_184615	ILMN_257288	C630007B19RIK	NM_182808.2	NM_182808.2		320265	54607078	NM_182808.2	C630007B19Rik	NP_877960.1	ILMN_2618488	006940341	S	925	CCAAGTGGATCTCTTATCTGCACTTTGGTTACCAGATAACCACAGTGCAC	6	+	96604865-96604914	6qD3	Mus musculus RIKEN cDNA C630007B19 gene (C630007B19Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			TAFA1; Tafa-1; FAM19A1 TAFA-1	TAFA1; Tafa-1; FAM19A1 TAFA-1
Mus musculus	RefSeq	ILMN_216580	ILMN_216580	RAB6	NM_024287.3	NM_024287.3		19346	141801837	NM_024287.3	Rab6	NP_077249.1	ILMN_1242802	002120209	S	677	AGAGCGGTTCAGGAGCTTGATTCCTAGCTACATTCGAGACTCCACTGTGG	7	+	107778384-107778433	7qE3	Mus musculus RAB6, member RAS oncogene family (Rab6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine [goid 18125] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AA419671; 2610028L11Rik	AA419671; 2610028L11Rik
Mus musculus	RefSeq	ILMN_216580	ILMN_216580	RAB6	NM_024287.3	NM_024287.3		19346	141801837	NM_024287.3	Rab6	NP_077249.1	ILMN_2699635	005870184	S	3308	CGTGCCTGCCAGTGCTTACGCTTACGCTTCTTTCCTAGTGTGATAAAGTG	7	+	107790053-107790102	7qE3	Mus musculus RAB6, member RAS oncogene family (Rab6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine [goid 18125] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AA419671; 2610028L11Rik	AA419671; 2610028L11Rik
Mus musculus	RefSeq	ILMN_199859	ILMN_199859	LOC381520	XM_358605.1	XM_358605.1			38078265	XM_358605.1	LOC381520		ILMN_1217766	002900626	S	510	GGCTAGAGAGGAAGAGATGAACACAGAAGGCTGGAGCAGTCAGAGAGGCC										
Mus musculus	MEEBO	ILMN_216702	ILMN_216702	CACNB1	scl0001538.1_0	NM_031173.1			13626025	NM_031173.1	Cacnb1		ILMN_2674213	004610546	S	1681	GCTCACCTCGCTCAGGAGAAATCTCAGCTTCTGGGGCGGGCTGGAGGCCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 15270] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IGI]		
Mus musculus	RefSeq	ILMN_214873	ILMN_214873	NSUN6	NM_028950.3	NM_028950.3		74455	34328504	NM_028950.3	Nsun6	NP_083226.2	ILMN_1260106	007330133	S	2433	GGTGAAGTCTAGTGATTTACGTTGTAGTTAAAATGGCCATTGAGAAGTAC	2	-	14917172-14917221	2qA2	Mus musculus NOL1/NOP2/Sun domain family member 6 (Nsun6), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	4933403D21Rik; 4933414E04Rik; NOPD1	4933403D21Rik; 4933414E04Rik; NOPD1
Mus musculus	RefSeq	ILMN_199442	ILMN_199442	ENSMUSG00000033219	NM_198666.3	NM_198666.3		381714	146134443	NM_198666.3	ENSMUSG00000033219	NP_941068.1	ILMN_2757062	007210097	S	1052	TGTTCTTGTATTTCTTTGTTTTTGCCTTTAACTCTATATTAATTGAACTT				5qA1	Mus musculus predicted gene, ENSMUSG00000033219 (ENSMUSG00000033219), mRNA.				MGC58177	MGC58177
Mus musculus	RefSeq	ILMN_242952	ILMN_242952	100041294	NM_011509.1	NM_011509.1		100041294	7949147	NM_011509.1	100041294	NP_035639.1	ILMN_2850839	001260731	S	21	GAAGGACCTGCGGCATCTGCGGGCTTGTTTGCTGTGCTCGTTAGTCAAGA	10	+	87553815-87553863:87554362-87554362	10qA4	Mus musculus predicted gene, 100041294 (100041294), mRNA.					
Mus musculus	RefSeq	ILMN_218120	ILMN_242952	100041294	NM_011509.1	NM_011509.1		100041294	7949147	NM_011509.1	100041294	NP_035639.1	ILMN_2691869	004890630	S	204	CAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTTAAGCCAGGTGTAT	10	+	87559018-87559046:87559253-87559273	10qA4	Mus musculus predicted gene, 100041294 (100041294), mRNA.					
Mus musculus	RefSeq	ILMN_215701	ILMN_215701	SYT7	NM_173067.2	NM_173067.2		54525	118129798	NM_173067.2	Syt7	NP_775090.1	ILMN_2662581	006940360	S	288	GGAGTTTATTCTAAACATTTCACCCTACGCCCCTTATGGCGACCCTCGAC	19	+	10496319-10496368	19qA	Mus musculus synaptotagmin VII (Syt7), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215086	ILMN_232056	ST6GALNAC6	NM_001025311.1	NM_001025311.1		50935	70778763	NM_001025311.1	St6galnac6	NP_001020482.1	ILMN_2681013	002230114	S	508	GGAAGCCCCAGGAATTTGTCAACCGGACCCCTGAGACGGTGTTCATCTTC	2	+	32470500-32470549	2qB	Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 (St6galnac6), transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1574] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + glycano-1,3-(N-acetyl-alpha-D-galactosaminyl)-glycoprotein = CMP + glycano-(2,6-alpha-N-acetylneuraminyl)-(N-acetyl-D-galactosaminyl)-glycoprotein [goid 1665] [evidence IDA]	Siat7f	Siat7f
Mus musculus	RefSeq	ILMN_232056	ILMN_232056	ST6GALNAC6	NM_001025311.1	NM_001025311.1		50935	70778763	NM_001025311.1	St6galnac6	NP_001020482.1	ILMN_3076534	006180452	I	8	CCAAGCACACAAAGATGCCCACTGACAGGTCTGGCTGTTGGCACAGCGTC	2	+	32455236-32455285	2qB	Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 (St6galnac6), transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1574] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + glycano-1,3-(N-acetyl-alpha-D-galactosaminyl)-glycoprotein = CMP + glycano-(2,6-alpha-N-acetylneuraminyl)-(N-acetyl-D-galactosaminyl)-glycoprotein [goid 1665] [evidence IDA]	Siat7f	Siat7f
Mus musculus	MEEBO	ILMN_196219	ILMN_196219	SLC9A2	scl13742.1.1_307				38074261	XM_129721	Slc9a2		ILMN_1220166	002900431	S	3632	GTGCATTCAGAGCTGCAAGCGGGGAAGGATCAACGCTTATACAGACCGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IDA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IDA]		
Mus musculus	MEEBO	ILMN_196219	ILMN_196219	SLC9A2	scl13742.1.1_307				38074261	XM_129721	Slc9a2		ILMN_1221373	000150601	S	13	GAACCGAAACCAAACCATCTGCCTCCCAGTTAACCCACACGGTTTCCCCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IDA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209995	ILMN_209995	CYP39A1	NM_018887.3	NM_018887.3		56050	142369036	NM_018887.3	Cyp39a1	NP_061375.1	ILMN_2601183	001580286	S	2688	CTCAGGCTTCTTCCCTTACCTGTCCTGGCTCCGGCTCCTGAAGTTGGAAA	17	+	43888015-43888064	17qB3	Mus musculus cytochrome P450, family 39, subfamily a, polypeptide 1 (Cyp39a1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of bile acids, any of a group of steroid carboxylic acids occurring in bile [goid 30573] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of bile acids, any of a group of steroid carboxylic acids occurring in bile [goid 6699] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: an oxysterol + NADPH + O2 = 7-alpha-hydroxylated oxysterol + NADP+ + H2O [goid 8396] [evidence IDA]; Catalysis of the reaction: a steroid + donor-H2 + O2 = 7-alpha-hydroxysteroid + H2O [goid 8387] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (24R)-cholest-5-ene-3beta,24-diol + NADPH + H+ + O2 = (24R)-cholest-5-ene-3beta,7alpha,24-triol + NADP+ + H2O [goid 33782] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209995	ILMN_209995	CYP39A1	NM_018887.3	NM_018887.3		56050	142369036	NM_018887.3	Cyp39a1	NP_061375.1	ILMN_2742311	004860050	S	964	ACGTCAATACAGTCCAAATTATGGACTGGTCGTACTTTGGGCTGCTCTGG	17	+	43828624-43828673	17qB3	Mus musculus cytochrome P450, family 39, subfamily a, polypeptide 1 (Cyp39a1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of bile acids, any of a group of steroid carboxylic acids occurring in bile [goid 30573] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of bile acids, any of a group of steroid carboxylic acids occurring in bile [goid 6699] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: an oxysterol + NADPH + O2 = 7-alpha-hydroxylated oxysterol + NADP+ + H2O [goid 8396] [evidence IDA]; Catalysis of the reaction: a steroid + donor-H2 + O2 = 7-alpha-hydroxysteroid + H2O [goid 8387] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (24R)-cholest-5-ene-3beta,24-diol + NADPH + H+ + O2 = (24R)-cholest-5-ene-3beta,7alpha,24-triol + NADP+ + H2O [goid 33782] [evidence IEA]		
Mus musculus	Riken	ILMN_203120	ILMN_203120	5830445I20RIK	ri|5830445I20|PX00039B10|AK030893|2676					AK030893	5830445I20Rik		ILMN_1221533	000070681	S	2411	GAGCACTGCCACACTTGGGTTGGGGACAGCACCAGAGCTCAGTCCAAACG										
Mus musculus	MEEBO	ILMN_185047	ILMN_185047	A930008A22RIK	scl36003.13.1_201				27777682	NM_172768	A930008A22Rik		ILMN_2423730	004900719	S	13	GGATCTTTAACTGTACTTTGCCTGGCGCTGTGCGCAAGGTCTGAAACCTT										
Mus musculus	MEEBO	ILMN_209120	ILMN_209120	CENTG3	scl0004123.1_58	NM_139153.1			21040228	NM_139153.1	Centg3		ILMN_2754598	000010669	S	2757	CTATGAAGCTCAGGAAGAGGGCAGAGGGACCAGAAGGACTCCACGGCCTG										
Mus musculus	MEEBO	ILMN_209120	ILMN_209120	CENTG3	scl0004123.1_58	NM_139153.1			21040228	NM_139153.1	Centg3		ILMN_2754596	003390576	S	2755	TCCTATGAAGCTCAGGAAGAGGGCAGAGGGACCAGAAGGACTCCACGGCC										
Mus musculus	RefSeq	ILMN_199361	ILMN_199361	KLK1B4	NM_010915.1	NM_010915.1		18048	8659571	NM_010915.1	Klk1b4	NP_035045.1	ILMN_1238736	006040626	S	404	TGTGAAGCCCATCACCCTGCCCACTGAGGAGCCCAAGCTGGGGAGCACAT	7	+	44078894-44078943	7qB4	Mus musculus kallikrein 1-related pepidase b4 (Klk1b4), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA];  [goid 5057] [evidence IDA]	Ngfa; mGk-4	Ngfa; mGk-4
Mus musculus	RefSeq	ILMN_223601	ILMN_223601	TRAPPC2L	NM_021502.1	NM_021502.1		59005	10946913	NM_021502.1	Trappc2l	NP_067477.1	ILMN_2766315	000670014	S	448	AGTGGGGACCTCTGCCTGCCTCAGTCGTTCAGAAGAGAAGCCTGCGTTCA	8	+	125139355-125139404	8qE1	Mus musculus trafficking protein particle complex 2-like (Trappc2l), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]		Hspc176; 1810017G16Rik; AB030200	Hspc176; 1810017G16Rik; AB030200
Mus musculus	RefSeq	ILMN_213529	ILMN_213529	OLFR1055	NM_147021.1	NM_147021.1		259023	22128896	NM_147021.1	Olfr1055	NP_667232.1	ILMN_2637965	002340193	S	807	GACTGGTCAAGTCGCATCTTTGTTCTATACACTGGTTATCCCCATGCTGA	2	-	86187065-86187114	2qD	Mus musculus olfactory receptor 1055 (Olfr1055), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR186-1	MOR186-1
Mus musculus	Riken	ILMN_205580	ILMN_205580	A730005H01RIK	ri|A730005H01|PX00148K11|AK042558|1682					AK042558	A730005H01Rik		ILMN_1226889	000650541	S	1332	GCAGTTACCGCGGCTCACACCTGAGGCCATCAATGCCTGCTGTCTGCTTT										
Mus musculus	RefSeq	ILMN_214022	ILMN_214022	OPN3	NM_010098.2	NM_010098.2		13603	118129915	NM_010098.2	Opn3	NP_034228.1	ILMN_1236196	002320224	S	1360	GGGAAATCCGAATCACCCACATGTTGTCTGTATTCAAGAAGCGACTGAGC	1	-	177592869-177592918	1qH4	Mus musculus opsin 3 (Opn3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Ecpn; MGC124138; ERO	Ecpn; MGC124138; ERO
Mus musculus	RefSeq	ILMN_247703	ILMN_247703	OLFR857	NM_001012265.1	NM_001012265.1		257963	59676578	NM_001012265.1	Olfr857	NP_001012265.1	ILMN_3003919	006980035	S	396	CCAAGTCATTCTAAGCCCTTGCCTCTGTAGATGTTTGGTCATAGTTTCCC	9	+	19517668-19517717	9qA3	Mus musculus olfactory receptor 857 (Olfr857), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR146-8P	MOR146-8P
Mus musculus	MEEBO	ILMN_194119	ILMN_194119	COL24A1	scl0071355.1_296				51708528	XM_355436	Col24a1		ILMN_1247522	002070095	S	1777	GGCTTTGACTGTGTTGATTTGCTGTTGCTGCCGTGCCTTGGGTTGCACTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_224122	ILMN_224122	PRSS18	scl019144.7_7				6755179	NM_011177	Prss18		ILMN_2775176	003360088	S	977	GACATGAGACATCCAGTTCTCCCCCACGACGCCTCTGACCCTCGCTGGCT										
Mus musculus	RefSeq	ILMN_216110	ILMN_319878	LOC100046129	XM_001475626.1	XM_001475626.1		100046129	149252975	XM_001475626.1	LOC100046129	XP_001475676.1	ILMN_1223795	001770441	S	1499	GCAGTGTTGCAAACCGTCTAGTGCTGTGGGCGTGGTTACTGTCATCCCTG					PREDICTED: Mus musculus similar to Hypocretin (orexin) receptor 1 (LOC100046129), mRNA.					
Mus musculus	RefSeq	ILMN_200059	ILMN_200059	LOC383191	XM_356912.1	XM_356912.1			38080134	XM_356912.1	LOC383191		ILMN_1249511	003140300	S	144	CCACGCAGAGGGAGAATTCAGGAAAATTGGTTCAGGAGCTGCTACAGCCC										
Mus musculus	MEEBO	ILMN_213567	ILMN_213567	SRC	scl0003384.1_16				25059026	BC039953	Src		ILMN_2638454	002970626	S	78	CGCGCCCCGCTGGGGTCCGCCCGGGCGCGTCCGGAGCTCACGGTCGCCGT							The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IMP]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IMP]		
Mus musculus	RefSeq	ILMN_209557	ILMN_209557	YIPF3	NM_145353.1	NM_145353.1		28064	21703703	NM_145353.1	Yipf3	NP_663328.1	ILMN_2933228	002570224	S	1153	CTACCGCCAAGGCAATAGCAGTGACTCTGCAGTCACATTGACCCTCTCTG	17	+	46388623-46388663:46388664-46388672	17qC	Mus musculus Yip1 domain family, member 3 (Yipf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		MGC118671; KLIP1; D17Wsu94e; C6orf109	MGC118671; KLIP1; D17Wsu94e; C6orf109
Mus musculus	RefSeq	ILMN_209557	ILMN_209557	YIPF3	NM_145353.1	NM_145353.1		28064	21703703	NM_145353.1	Yipf3	NP_663328.1	ILMN_2649801	000270224	S	478	CCAACATTGACATCCTCAGACCCTACTTTGATGTGGAGCCTGCCCAGGTC	17	+	46386177-46386226	17qC	Mus musculus Yip1 domain family, member 3 (Yipf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		MGC118671; KLIP1; D17Wsu94e; C6orf109	MGC118671; KLIP1; D17Wsu94e; C6orf109
Mus musculus	RefSeq	ILMN_209557	ILMN_209557	YIPF3	NM_145353.1	NM_145353.1		28064	21703703	NM_145353.1	Yipf3	NP_663328.1	ILMN_1222152	004570687	S	1375	GCAAGTCTCTGCAGCCAAGTGCAGAATATGGGTCAGCTCTTCTGAGGCCC	17	+	46388845-46388894	17qC	Mus musculus Yip1 domain family, member 3 (Yipf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		MGC118671; KLIP1; D17Wsu94e; C6orf109	MGC118671; KLIP1; D17Wsu94e; C6orf109
Mus musculus	RefSeq	ILMN_213721	ILMN_213721	GYK	NM_212444.2	NM_212444.2		14933	95147349	NM_212444.2	Gyk	NP_997609.1	ILMN_1219828	003310630	S	3271	TTCTCAAATATTTAGAAGGATTGGTTATAACTCATTAACCTAGCTTCCTA	X	-	82948382-82948431	XqC1	Mus musculus glycerol kinase (Gyk), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 6072] [evidence IEA]; The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + glycerol = ADP + glycerol 3-phosphate [goid 4370] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	GK; D930012N15Rik	GK; D930012N15Rik
Mus musculus	RefSeq	ILMN_199285	ILMN_199285	LOC278668	XM_204836.2	XM_204836.2			28480972	XM_204836.2	LOC278668		ILMN_1257577	002750021	S	153	TGTTCAGTGGTACAGACAGAAGTCAGGCAAAGGCCCTGCCCAGCTAATCT										
Mus musculus	RefSeq	ILMN_214170	ILMN_214170	NRGN	NM_022029.2	NM_022029.2		64011	145587078	NM_022029.2	Nrgn	NP_071312.1	ILMN_2645071	004570189	S	1076	CGCACCCTGAGAGCAGCCCCTCCCGCTCTTCTTTGTTTATGCAAAAGCCT				9qA4	Mus musculus neurogranin (Nrgn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence TAS]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence TAS]	AI838505; Pss1; R75334; NG/RC3; NG; 0710001B06Rik; RC3	AI838505; Pss1; R75334; NG/RC3; NG; 0710001B06Rik; RC3
Mus musculus	MEEBO	ILMN_185327	ILMN_185327	2310024N18RIK	scl069570.2_312						2310024N18Rik		ILMN_2426115	003130189	S	5	CACAGCACCTCCAGACTTGTGGCACATTCAAATCCAAGTCTTTCTTGAAG										
Mus musculus	RefSeq	ILMN_217974	ILMN_234459	FJX1	NM_010218.2	NM_010218.2		14221	47059107	NM_010218.2	Fjx1	NP_034348.2	ILMN_2689998	001450487	S	2103	CCCTGACAGTTTGTCTCACCCATTCCTGAACTCCTATCATTTTGGCCTGA	2	-	102289797-102289846	2qE2	Mus musculus four jointed box 1 (Drosophila) (Fjx1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]				
Mus musculus	RefSeq	ILMN_217974	ILMN_234459	FJX1	NM_010218.2	NM_010218.2		14221	47059107	NM_010218.2	Fjx1	NP_034348.2	ILMN_2737416	005670170	S	1274	ACGAACCGCTGCTACAGTCGGTGTGTGTATTCCGAGAGCGGACTGCTAGG	2	-	102290626-102290675	2qE2	Mus musculus four jointed box 1 (Drosophila) (Fjx1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]				
Mus musculus	RefSeq	ILMN_197633	ILMN_250394	LOC675098	XR_004731.1	XR_004731.1		675098	94370345	XR_004731.1	LOC675098		ILMN_1260062	003870315	S	1367	GCTCCTCCATCTACACCACAAGGGACAAGATTCTCCAAGCGAGCTTCTGG					PREDICTED: Mus musculus similar to jumonji domain containing 2D (LOC675098), mRNA.					
Mus musculus	RefSeq	ILMN_222933	ILMN_222933	CASQ2	NM_009814.1	NM_009814.1		12373	6753291	NM_009814.1	Casq2	NP_033944.1	ILMN_1247775	006520347	S	1989	CCCCGCTAGTGAGCTGTCCCATTCTGAGTTAAAATCGCTTTATCCACTGG	3	+	101950091-101950140	3qF2.2	Mus musculus calsequestrin 2 (Casq2), mRNA.	A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence TAS]	Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC115896; AW146219; AA033488; ESTM52	MGC115896; AW146219; AA033488; ESTM52
Mus musculus	RefSeq	ILMN_213488	ILMN_213488	DUSP3	NM_028207.2	NM_028207.2		72349	142353670	NM_028207.2	Dusp3	NP_082483.1	ILMN_2637538	006580463	S	285	CCTACTTGGGCATCAAGGCCAATGATACGCAGGAGTTCAACCTCAGTGCT	11	-	101842982-101843031	11qD	Mus musculus dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) (Dusp3), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]	VHR; 2210015O03Rik; T-DSP11; 5031436O03Rik	VHR; 2210015O03Rik; T-DSP11; 5031436O03Rik
Mus musculus	RefSeq	ILMN_213488	ILMN_213488	DUSP3	NM_028207.2	NM_028207.2		72349	142353670	NM_028207.2	Dusp3	NP_082483.1	ILMN_2684693	006110386	S	1027	GCCCGACACGCCCTGCTGAGGCAGACGAATGACATTAAGTTCTGAAGCAG	11	-	101835563-101835612	11qD	Mus musculus dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) (Dusp3), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]	VHR; 2210015O03Rik; T-DSP11; 5031436O03Rik	VHR; 2210015O03Rik; T-DSP11; 5031436O03Rik
Mus musculus	RefSeq	ILMN_221744	ILMN_221744	OLFR1112	NM_146661.1	NM_146661.1		258655	33238903	NM_146661.1	Olfr1112	NP_666872.1	ILMN_1232053	007320519	S	630	CCTTTTAGTTGTCACCATTCCTTTTATGCTGATCCTTGCATCTTATGTGA	2	+	87032475-87032524	2qD	Mus musculus olfactory receptor 1112 (Olfr1112), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR264-6	MOR264-6
Mus musculus	RefSeq	ILMN_212290	ILMN_212290	TLL1	NM_009390.2	NM_009390.2		21892	117414179	NM_009390.2	Tll1	NP_033416.2	ILMN_2624789	002680239	S	4305	GATTTTGTGACCACTTCATTGTATCTGTATCTTGAGAAGTTTGAAATATC	8	-	66494140-66494189	8qB3.1	Mus musculus tolloid-like (Tll1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Tll; Tll-1	Tll; Tll-1
Mus musculus	MEEBO	ILMN_216219	ILMN_216219	1810032O08RIK	scl40700.5_96	NM_025472.2			31541847	NM_025472.2	1810032O08Rik		ILMN_1226923	006510382	S	1586	GCCTTGTGATGGCGGCTGGAATCCCAGGACTATCTGATAATGCTTGTTCC										
Mus musculus	MEEBO	ILMN_195021	ILMN_195021	9530027K23RIK	scl34378.13_481				31341162	NM_176838	9530027K23Rik		ILMN_1243939	004560093	S	19	CACCATGGCATGTCCTTTGCACTGATTAAAGGGTGCAGAACTCAGGTTCC										
Mus musculus	MEEBO	ILMN_195021	ILMN_195021	9530027K23RIK	scl34378.13_481				31341162	NM_176838	9530027K23Rik		ILMN_1224254	000580255	S	2548	AAGATGATGGCCGCCTTACAGGCAGGGCTGGAGATGTGATAGGGCTGCTC										
Mus musculus	RefSeq	ILMN_204902	ILMN_213212	RBMS3	NM_178660.3	NM_178660.3		207181	148747312	NM_178660.3	Rbms3	NP_848775.2	ILMN_1240903	003450687	S	285	AGCGCCTGCGATTGACACCACTAGAGACAGGCTGGTCACAGAGCAAACTG				9qF3	Mus musculus RNA binding motif, single stranded interacting protein (Rbms3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	6720477E09Rik; MGC118437	6720477E09Rik; MGC118437
Mus musculus	RefSeq	ILMN_197319	ILMN_197319	LOC238896	XM_138861.2	XM_138861.2			38075117	XM_138861.2	LOC238896		ILMN_2527707	003460491	S	1781	CTGCTGCGGCAGATGGGACAGCTTATCCAAGAGCCAAGCGCTTTATCCAG										
Mus musculus	MEEBO	ILMN_216350	ILMN_216350	4931429I11RIK	scl35993.5.1_203	XM_134806.2			38090310	XM_134806.2	4931429I11Rik		ILMN_2751111	004070088	S	1429	TCTAGACAGCGTTTAGTGGGGATCAAAAGTGCTATGCAAGGGACATGGAG										
Mus musculus	RefSeq	ILMN_213171	ILMN_213171	NR5A2	NM_030676.1	NM_030676.1		26424	14010846	NM_030676.1	Nr5a2	NP_109601.1	ILMN_2634389	004810725	S	2889	TTGTGACCCGAGCGTCCCCAAAACCTGGGATGCAAAGACAGTGATTCTGC	1	-	138740942-138740991	1qE4	Mus musculus nuclear receptor subfamily 5, group A, member 2 (Nr5a2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AU020803; Ftf; LRH-1; D1Ertd308e	AU020803; Ftf; LRH-1; D1Ertd308e
Mus musculus	RefSeq	ILMN_213171	ILMN_213171	NR5A2	NM_030676.1	NM_030676.1		26424	14010846	NM_030676.1	Nr5a2	NP_109601.1	ILMN_2813203	002340228	S	2943	GGCCTGGAAAGACAGGAAAGCCAGTCTCCTACAAAGGGGAATGGAAGATC	1	-	138740888-138740937	1qE4	Mus musculus nuclear receptor subfamily 5, group A, member 2 (Nr5a2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AU020803; Ftf; LRH-1; D1Ertd308e	AU020803; Ftf; LRH-1; D1Ertd308e
Mus musculus	RefSeq	ILMN_213171	ILMN_213171	NR5A2	NM_030676.1	NM_030676.1		26424	14010846	NM_030676.1	Nr5a2	NP_109601.1	ILMN_2751680	004290450	S	295	TTCCGGACCGACACCGACGCCCCATTCCCGCCCGCAGCCGCCTTGTCATG	1	-	138845377-138845426	1qE4	Mus musculus nuclear receptor subfamily 5, group A, member 2 (Nr5a2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AU020803; Ftf; LRH-1; D1Ertd308e	AU020803; Ftf; LRH-1; D1Ertd308e
Mus musculus	RefSeq	ILMN_212754	ILMN_212754	NANP	NM_026086.1	NM_026086.1		67311	13385585	NM_026086.1	Nanp	NP_080362.1	ILMN_2629922	002030097	S	1187	AAATATTGTGCCTACTTTCAATGTATGTGTTCTTAATCTGTTATCTAATT	2	-	150855535-150855584	2qG3	Mus musculus N-acetylneuraminic acid phosphatase (Nanp), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-phosphoglycolate + H2O = glycolate + phosphate [goid 8967] [evidence IEA]; Catalysis of the reaction: N-acylneuraminate 9-phosphate + H2O = N-acylneuraminate + phosphate [goid 50124] [evidence IEA]	Hdhd4; 1600031M04Rik; MGC103377	Hdhd4; 1600031M04Rik; MGC103377
Mus musculus	RefSeq	ILMN_197409	ILMN_197409	LOC329506	XM_283758.1	XM_283758.1			28487552	XM_283758.1	LOC329506		ILMN_1216575	000160075	S	1132	CTCACTCCCTCTTCCATCCAGAAGATGACTGCTATCCACAAGCAGAACTG										
Mus musculus	RefSeq	ILMN_188329	ILMN_259157	NKX1-2	NM_009123.2	NM_009123.2		20231	31982826	NM_009123.2	Nkx1-2	NP_033149.1	ILMN_2659630	004880286	S	1713	ACGGGGCAACTCTGTTACCTCACAGGTTTTGAGAACAGCTTGGACAGACC	7	-	139788062-139788111	7qF3	Mus musculus NK1 transcription factor related, locus 2 (Drosophila) (Nkx1-2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Nkx-1.2; Sax1; Nkx-1.1	Nkx-1.2; Sax1; Nkx-1.1
Mus musculus	Riken	ILMN_202532	ILMN_202532	USP25	ri|2610101O11|ZX00082B09|AK011798|848					AK011798	Usp25		ILMN_2550329	005360554	S	187	AGAGGACCTGAGGCGGCCGCGGTGGCGCTCTCCGGTAGCGTCTCGCCGCT						A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence ISS]		
Mus musculus	Riken	ILMN_205224	ILMN_205224	ANKRA2	ri|E230014B14|PX00209F05|AK054037|1924					AK054037	Ankra2		ILMN_1243090	001990025	S	1609	CAGAATCCCAGGGCTCGGTTGAGCTGACGCAGTGACTTTTGTGTGCTTGC						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_188415	ILMN_188415	D630032F02	scl0268776.5_19						D630032F02		ILMN_1258881	000990465	S	15	CCCATTGTGGACGCTGTGGTGTACCCGCTCATTGCAAAATGTGGTTTCAA										
Mus musculus	RefSeq	ILMN_220073	ILMN_220073	RGL2	NM_009059.2	NM_009059.2		19732	46195799	NM_009059.2	Rgl2	NP_033085.2	ILMN_2899788	005090543	S	2712	CGTAACCATGTTGGATACCTGCATCTAGCTTCCACCTCTGCGGAATGTGG	17	+	34070565-34070570:34070495-34070538	17qB1	Mus musculus ral guanine nucleotide dissociation stimulator-like 2 (Rgl2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	Rab2l; Rgt2; Rlf; KE1.5	Rab2l; Rgt2; Rlf; KE1.5
Mus musculus	RefSeq	ILMN_220073	ILMN_220073	RGL2	NM_009059.2	NM_009059.2		19732	46195799	NM_009059.2	Rgl2	NP_033085.2	ILMN_2899787	003370647	S	2641	AGTGAAGTCACCTGTTTACGAAACCACTGCGGAAGCCAGCCCCAGCCCCA	17	+	34070494-34070543	17qB1	Mus musculus ral guanine nucleotide dissociation stimulator-like 2 (Rgl2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	Rab2l; Rgt2; Rlf; KE1.5	Rab2l; Rgt2; Rlf; KE1.5
Mus musculus	Riken	ILMN_204450	ILMN_204450	BAI3	ri|A830096D10|PX00156B22|AK044160|4569					AK044160	BAI3		ILMN_1257542	003990017	S	4362	GGAACTCACAACCTGGCAGACTGGTACAGCAGAAGATGACAAGCTGTTGC										
Mus musculus	RefSeq	ILMN_187759	ILMN_187759	V1RD7	NM_030737.2	NM_030737.2		81012	126723604	NM_030737.2	V1rd7	NP_109662.1	ILMN_2817661	006370088	S	1166	TGCACTTTTCTTCACATTTCCTTTGTGGACTCTCGGCTCTGGTTAAGGCG	7	+	24418172-24418221	7qA3	Mus musculus vomeronasal 1 receptor, D7 (V1rd7), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC130504; V3R7	MGC130504; V3R7
Mus musculus	RefSeq	ILMN_201691	ILMN_331995	LOC100046483	XM_001476285.1	XM_001476285.1		100046483	149259232	XM_001476285.1	LOC100046483	XP_001476335.1	ILMN_1240588	003400706	S	1164	AGTACTAGTCTGCAGGGAGCTGGCTGTGCAGTGTGGCAGAGCGCATAGTT					PREDICTED: Mus musculus similar to casein kinase II, alpha prime subunit (LOC100046483), mRNA.					
Mus musculus	RefSeq	ILMN_202708	ILMN_331995	LOC100046483	XM_001476285.1	XM_001476285.1		100046483	149259232	XM_001476285.1	LOC100046483	XP_001476335.1	ILMN_1227008	000610181	S	3411	GTAACATGTATGCCCGGCACAGCTTGCTCCAGCCTCCTGGAGATTTTCCC					PREDICTED: Mus musculus similar to casein kinase II, alpha prime subunit (LOC100046483), mRNA.					
Mus musculus	RefSeq	ILMN_202026	ILMN_242669	1700014B07RIK	XM_888419.2	XM_888419.2		72248	94366009	XM_888419.2	1700014B07Rik	XP_893512.1	ILMN_1255305	002690681	S	739	CCCGTGAAGTGAGAGGGAAACTGTACCTGCTTCGTGGAGTTGTTCCCCGC	2	-	6243338-6243376:6243377-6243387	2qA1	PREDICTED: Mus musculus RIKEN cDNA 1700014B07 gene (1700014B07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_248030	ILMN_248030	DYRK2	NM_001014390.2	NM_001014390.2		69181	118131133	NM_001014390.2	Dyrk2	NP_001014412.1	ILMN_3061028	001740433	I	105	CACTGCCATGCACGTTCCTCTCCCGCGGCCATGTTAACCAGGAAACCTTC	10	-	118305805-118305825:118305826-118305854	10qD2	Mus musculus dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 (Dyrk2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISO]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence ISO]	1810038L18Rik	1810038L18Rik
Mus musculus	RefSeq	ILMN_248030	ILMN_248030	DYRK2	NM_001014390.2	NM_001014390.2		69181	118131133	NM_001014390.2	Dyrk2	NP_001014412.1	ILMN_3138439	005910390	A	1759	CCGGAGAGAAGACAGCGGTGAAGAGGGTCACAGAGAGTACTGGTGCTATC	10	-	118296733-118296782	10qD2	Mus musculus dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 (Dyrk2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISO]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence ISO]	1810038L18Rik	1810038L18Rik
Mus musculus	RefSeq	ILMN_212517	ILMN_241024	4921525H12RIK	XM_001052094.2	XM_001052094.2		329738	149251743	XM_001052094.2	4921525H12Rik	XP_001052094.2	ILMN_2627377	003390220	S	1693	GGGGCCACAGAAGAACTAACTGTGGGAAGTTTTCCAGTAGCATCCATGAA				3qF3	PREDICTED: Mus musculus RIKEN cDNA 4921525H12 gene (4921525H12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_190774	ILMN_190774	ZFP110	NM_022981.3	NM_022981.3		65020	42734473	NM_022981.3	Zfp110	NP_075357.3	ILMN_2498730	001470762	S	2855	TTTAAGAAGTCAAGTACCAAAAATTGCACTGATATTTCTATACAGGATAA	7	+	13435490-13435539	7qA1	Mus musculus zinc finger protein 110 (Zfp110), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	N28112; 2900024E01Rik; Nrif1; NRIF	N28112; 2900024E01Rik; Nrif1; NRIF
Mus musculus	RefSeq	ILMN_190774	ILMN_190774	ZFP110	NM_022981.3	NM_022981.3		65020	42734473	NM_022981.3	Zfp110	NP_075357.3	ILMN_1238551	004760239	S	336	GTGATATCTCAGCTAGAAAAAGCCGAAGACTGCTGGCCAATGCAGAGAGA	7	+	13422461-13422510	7qA1	Mus musculus zinc finger protein 110 (Zfp110), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	N28112; 2900024E01Rik; Nrif1; NRIF	N28112; 2900024E01Rik; Nrif1; NRIF
Mus musculus	RefSeq	ILMN_200824	ILMN_249819	EG547447	XM_908268.1	XM_908268.1		547447	83002069	XM_908268.1	EG547447	XP_913361.1	ILMN_2540136	007320279	S	274	GCAGTGTTCCCTACACAGGAAGCAATAAATAGAAAAGTAGTTAGTCTGGT				XqA7.2	PREDICTED: Mus musculus predicted gene, EG547447 (EG547447), mRNA.					
Mus musculus	RefSeq	ILMN_223066	ILMN_223066	TC2N	NM_028924.2	NM_028924.2		74413	131888111	NM_028924.2	Tc2n	NP_083200.1	ILMN_2758892	007650386	S	1829	ATTAAACTTTATAGTCGGAGCTCTGTAAGAAGAAAACATTTTGTAGGCCA	12	-	102889202-102889251	12qE	Mus musculus tandem C2 domains, nuclear (Tc2n), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			Tac2-N; 4933406D09Rik	Tac2-N; 4933406D09Rik
Mus musculus	RefSeq	ILMN_209327	ILMN_209327	CCR1	NM_009912.3	NM_009912.3		12768	142380627	NM_009912.3	Ccr1	NP_034042.2	ILMN_2594763	005490025	S	2472	ATAGAATTCTTTTGGCCCATATTTTATATATGAAAAGAACAAACTAAAAG	9	-	123877142-123877191	9qF4	Mus musculus chemokine (C-C motif) receptor 1 (Ccr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IDA]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IDA]	Cmkbr1; Mip-1a-R	Cmkbr1; Mip-1a-R
Mus musculus	RefSeq	ILMN_219596	ILMN_217199	LRRC59	NM_133807.1	NM_133807.1		98238	19527025	NM_133807.1	Lrrc59	NP_598568.1	ILMN_1251679	003520348	S	2745	CCAAGAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCCTGCGG	11	+	94506495-94506530	11qD	Mus musculus leucine rich repeat containing 59 (Lrrc59), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA959742; C78668; RP23-290B5.2	AA959742; C78668; RP23-290B5.2
Mus musculus	RefSeq	ILMN_217199	ILMN_217199	LRRC59	NM_133807.1	NM_133807.1		98238	19527025	NM_133807.1	Lrrc59	NP_598568.1	ILMN_2931384	005090360	S	2203	ATTAGCACAACCAGGGCAGAGCCGCCCACCTCCCTGCTGCTACAAGAAAG	11	+	94505953-94506002	11qD	Mus musculus leucine rich repeat containing 59 (Lrrc59), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA959742; C78668; RP23-290B5.2	AA959742; C78668; RP23-290B5.2
Mus musculus	RefSeq	ILMN_219596	ILMN_217199	LRRC59	NM_133807.1	NM_133807.1		98238	19527025	NM_133807.1	Lrrc59	NP_598568.1	ILMN_2710968	002940475	S	2750	GAAATCCAAGAAATAAGCATCAAATCTCGAAGTCAGAGTGAACTCTTGCC	11	+	94506500-94506530	11qD	Mus musculus leucine rich repeat containing 59 (Lrrc59), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA959742; C78668; RP23-290B5.2	AA959742; C78668; RP23-290B5.2
Mus musculus	RefSeq	ILMN_219596	ILMN_217199	LRRC59	NM_133807.1	NM_133807.1		98238	19527025	NM_133807.1	Lrrc59	NP_598568.1	ILMN_1246446	001850056	S	2658	CCAGCTAGGGAGCTATGATGAGGCTGACTCCTGTTTTCATGATGTCACCA	11	+	94506408-94506457	11qD	Mus musculus leucine rich repeat containing 59 (Lrrc59), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA959742; C78668; RP23-290B5.2	AA959742; C78668; RP23-290B5.2
Mus musculus	RefSeq	ILMN_217199	ILMN_217199	LRRC59	NM_133807.1	NM_133807.1		98238	19527025	NM_133807.1	Lrrc59	NP_598568.1	ILMN_1241854	000240403	S	2707	AGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTTGGATTTCTACAAT	11	+	94506457-94506506	11qD	Mus musculus leucine rich repeat containing 59 (Lrrc59), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA959742; C78668; RP23-290B5.2	AA959742; C78668; RP23-290B5.2
Mus musculus	RefSeq	ILMN_217199	ILMN_217199	LRRC59	NM_133807.1	NM_133807.1		98238	19527025	NM_133807.1	Lrrc59	NP_598568.1	ILMN_1252817	000290594	S	2695	CCCGCAGGCAAGAGTTCACTCTGACTTCGAGATTTGATGCTTATTTCTTG	11	+	94506445-94506494	11qD	Mus musculus leucine rich repeat containing 59 (Lrrc59), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA959742; C78668; RP23-290B5.2	AA959742; C78668; RP23-290B5.2
Mus musculus	MEEBO	ILMN_190835	ILMN_190835	4930564D15RIK	scl22839.1.328_39						4930564D15Rik		ILMN_2473674	006180672	S	3	GGGTGGCAGCTCACTGTTGGGAGTTGCATGCTGCAACTTAATGGTCAGAA										
Mus musculus	RefSeq	ILMN_197277	ILMN_197277	LOC241528	XM_141031.3	XM_141031.3			38074937	XM_141031.3	LOC241528		ILMN_2527557	006350615	S	503	CATGGGTATGTGGCTGCACCATGGAGCCCTTGCTGAAGTGGCTGCGGAAT										
Mus musculus	RefSeq	ILMN_184844	ILMN_321922	LOC100044683	XM_001473088.1	XM_001473088.1		100044683	149258426	XM_001473088.1	LOC100044683	XP_001473138.1	ILMN_1239032	001580520	S	3716	GCCCCTTTTCTCGAGCCGTAGGGAGTCCCATCAAGTTAAGCAGTGTTTTC					PREDICTED: Mus musculus similar to Leucine rich repeat containing 8 family, member E (LOC100044683), mRNA.					
Mus musculus	Riken	ILMN_204627	ILMN_204627	SCYB11	ri|C730001K22|PX00086E16|AK050012|3138					AK050012	Scyb11		ILMN_2566439	004570180	S	2149	GCCTGAAGATTGCTGGTCTATAAATGCTCCTCAGACTCCTCAGGTTCAGC										
Mus musculus	MEEBO	ILMN_216846	ILMN_216846	2810458H16RIK	scl072836.1_6	XM_355022.1			38082614	XM_355022.1	2810458H16Rik		ILMN_2676040	004860095	S	747	GCACCAGGACAAAGATTCCCTCTTGGAGAGTCTGCATACAAGACGTTGCT										
Mus musculus	RefSeq	ILMN_211284	ILMN_211284	C130022K22RIK	NM_172730.1	NM_172730.1		232236	27370063	NM_172730.1	C130022K22Rik	NP_766318.1	ILMN_2803004	000430592	S	4296	TCTTACCGCTTGGTATAGGGGGACTATCTTCTCTCCATGCTGACCCAGCC	6	+	91849737-91849786	6qD1	Mus musculus RIKEN cDNA C130022K22 gene (C130022K22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199650	ILMN_244193	GM281	XM_977313.1	XM_977313.1		238939	94396626	XM_977313.1	Gm281	XP_982407.1	ILMN_1223874	000650050	S	2026	ACAACCTGCAATATGGCAAAGCTGTCAAGTCCAAGACAGGAACTGCTGTC				14qA1	PREDICTED: Mus musculus gene model 281, (NCBI) (Gm281), mRNA.					
Mus musculus	RefSeq	ILMN_197394	ILMN_244193	GM281	XM_977313.1	XM_977313.1		238939	94396626	XM_977313.1	Gm281	XP_982407.1	ILMN_1226113	003360307	S	1209	GCTCCAAGTTCTGGCCCTGTAGGTTCTGGACAACTATTTGAGCAAGTGCC				14qA1	PREDICTED: Mus musculus gene model 281, (NCBI) (Gm281), mRNA.					
Mus musculus	MEEBO	ILMN_194147	ILMN_194147	COL8A2	scl24964.1.1958_52				41054949	NM_199473	Col8a2		ILMN_2688966	006290221	S	3994	GGATTCTAACGTCTGTGGATTGGAGCTGTAGATGTCACTGACCAGCGTTG						A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IGI]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194147	ILMN_194147	COL8A2	scl24964.1.1958_52				41054949	NM_199473	Col8a2		ILMN_2503839	001190564	S	17	AAAGCCACGTCCTGCTATCTAGTTTACCCTGGTAGAACCTCAGTTGGCTG						A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IGI]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219853	ILMN_219853	UQCRQ	NM_025352.1	NM_025352.1		22272	21539584	NM_025352.1	Uqcrq	NP_079628.1	ILMN_2714442	001400307	S	1362	GTGAGGCAAATGGGAAATAGCTATGTCTGACAGTCATACACCCACACCCT	11	-	53241520-53241569	11qB1.3	Mus musculus ubiquinol-cytochrome c reductase, complex III subunit VII (Uqcrq), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]	9.5kDa; 1500040F11Rik; c1502; AA959903; RP23-226J16.5; QP-C; 1100001F06Rik; 5830407L17Rik; Uqcrb; Qpc	9.5kDa; 1500040F11Rik; c1502; AA959903; RP23-226J16.5; QP-C; 1100001F06Rik; 5830407L17Rik; Uqcrb; Qpc
Mus musculus	RefSeq	ILMN_216940	ILMN_216940	HIST1H2BC	NM_023422.3	NM_023422.3		68024	142381596	NM_023422.3	Hist1h2bc	NP_075911.2	ILMN_1242399	006400017	S	462	GCTGGATGCTGTAACCTCAAGACAGTGCAAATGGGTGATACTAGCAGATT	13	+	23784083-23784132	13qA3.1	Mus musculus histone cluster 1, H2bc (Hist1h2bc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	R74621; 2610022J01Rik; H2bfs	R74621; 2610022J01Rik; H2bfs
Mus musculus	RefSeq	ILMN_216940	ILMN_216940	HIST1H2BC	NM_023422.3	NM_023422.3		68024	142381596	NM_023422.3	Hist1h2bc	NP_075911.2	ILMN_2677231	000270639	S	643	TAAGATGCTCCTAGCAAAAGAATGCTTTTAAGTGTTTGTCATGTATGGAT	13	+	23784264-23784313	13qA3.1	Mus musculus histone cluster 1, H2bc (Hist1h2bc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	R74621; 2610022J01Rik; H2bfs	R74621; 2610022J01Rik; H2bfs
Mus musculus	RefSeq	ILMN_212850	ILMN_212850	RPL4	NM_024212.2	NM_024212.2		67891	31340596	NM_024212.2	Rpl4	NP_077174.1	ILMN_2874507	000940221	S	1384	GGTGACAAACCCTTGTGTGACTCTTAAATTGTGGATGTTTCCAAGCCCCT	9	+	63976518-63976567	9qC	Mus musculus ribosomal protein L4 (Rpl4), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2010004J23Rik	2010004J23Rik
Mus musculus	RefSeq	ILMN_212850	ILMN_212850	RPL4	NM_024212.2	NM_024212.2		67891	31340596	NM_024212.2	Rpl4	NP_077174.1	ILMN_2631003	005290079	S	1425	CAAGCCCCTTGAAATTAACCTTTTGAAGAACAAGTGGCAAGATGTGAGAC	9	+	63976559-63976608	9qC	Mus musculus ribosomal protein L4 (Rpl4), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2010004J23Rik	2010004J23Rik
Mus musculus	MEEBO	ILMN_190885	ILMN_190885	ARFGEF2	scl099371.22_141				51712804	XM_130646	Arfgef2		ILMN_1230252	001690639	S	5280	ATCCCTGAGCTCCGAGCAGTTCTGCGAAAGTTCTTCCTGCGGATAGGCCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]		
Mus musculus	RefSeq	ILMN_241845	ILMN_241845	RPL6	NM_011290.3	NM_011290.3		19988	110625628	NM_011290.3	Rpl6	NP_035420.2	ILMN_2855066	003420543	S	1019	TCTGTGTCTTCCTCTGGCCCTTTCTGGAAAGACCTGCTTAATCTGAAGCA				5qF	Mus musculus ribosomal protein L6 (Rpl6), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC117949; Taxreb107	MGC117949; Taxreb107
Mus musculus	Riken	ILMN_204379	ILMN_204379	USP25	ri|9830112E21|PX00118G15|AK036456|1241					AK036456	Usp25		ILMN_2564524	003120725	S	897	AGTTTTGAATTACAAGCCTCCATCAAATGCTCAAGATTTACCCCGAAACC						A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence ISS]		
Mus musculus	Riken	ILMN_205462	ILMN_205462	BUB3	ri|A430038G23|PX00135K20|AK039977|1188					AK039977	Bub3		ILMN_1246921	000670180	S	701	TTTTACCCAGTGGCCTCTCCTGGGCTGAGAATGCAGAGGCTTGGGCACAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IMP]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IMP]			
Mus musculus	Riken	ILMN_206092	ILMN_206092	E330037N08RIK	ri|E330037N08|PX00318J20|AK054530|3470					AK054530	E330037N08Rik		ILMN_1217413	002810474	S	3344	AAGCCCCCTTCAGGGCAGGTTTGGTATATAGTTGGTGCACCTGAGACAGG										
Mus musculus	RefSeq	ILMN_215315	ILMN_215315	PCTK2	NM_146239.1	NM_146239.1		237459	22122812	NM_146239.1	Pctk2	NP_666351.1	ILMN_2657994	001740634	S	3162	CCTCTGGCTCAAAAAGCCAGCATTATTCTATGAGAAAGATCCCTGTAGGC	10	+	92729736-92729785	10qC2	Mus musculus PCTAIRE-motif protein kinase 2 (Pctk2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	6430598J10Rik; MGC25109	6430598J10Rik; MGC25109
Mus musculus	RefSeq	ILMN_210734	ILMN_210734	E130309F12RIK	NM_178756.2	NM_178756.2		272031	31343410	NM_178756.2	E130309F12Rik	NP_848871.1	ILMN_2841788	004760711	S	3540	GATTCATTCCTCAGGTTTGGATGTCCCTACTTGGTTTTTCTGACAAAGAC	4	+	49361139-49361188	4qB1	Mus musculus RIKEN cDNA E130309F12 gene (E130309F12Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	KIAA4247; PRG-3; mKIAA4247	KIAA4247; PRG-3; mKIAA4247
Mus musculus	RefSeq	ILMN_211771	ILMN_211771	INPP5F	NM_178641.5	NM_178641.5		101490	146198572	NM_178641.5	Inpp5f	NP_848756.2	ILMN_2619390	000630224	S	2043	AGTTATATGCAGTTGCTGCTGCCGGGTGACGAGAAGTTCCACGGGGGCTG				7qF3	Mus musculus inositol polyphosphate-5-phosphatase F (Inpp5f), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SAC2; mKIAA0966; cI-27; AW561896; 5830435P03Rik; AI115354	SAC2; mKIAA0966; cI-27; AW561896; 5830435P03Rik; AI115354
Mus musculus	Riken	ILMN_206414	ILMN_206414	C230026M06RIK	ri|C230026M06|PX00173P12|AK082229|1900					AK082229	C230026M06Rik		ILMN_1234330	006250386	S	1711	AACCCTCGTGTGGCTTCGCAGGTGCTGGATGGTGTGAACAAATGCTCCGC										
Mus musculus	Riken	ILMN_206580	ILMN_206580	D930008O22RIK	ri|D930008O22|PX00200B20|AK086161|2372					AK086161	D930008O22Rik		ILMN_1243545	000450014	S	2107	GTAGAGCTTGGGCTAAACCTTGAGTGTGTTTGTGCTGGGTAAGTTCTCCC										
Mus musculus	RefSeq	ILMN_199624	ILMN_259906	GM1330	XM_918165.1	XM_918165.1		383753	82886002	XM_918165.1	Gm1330	XP_923258.1	ILMN_1252921	004280386	S	356	CAGAAGAAGTCACATGCAAGGACCTCCTGTCAAAATTGGCCAGCTGTCCC				2qG3	PREDICTED: Mus musculus gene model 1330, (NCBI) (Gm1330), mRNA.					
Mus musculus	RefSeq	ILMN_220461	ILMN_220461	POMGNT1	NM_029786.1	NM_029786.1		68273	27777637	NM_029786.1	Pomgnt1	NP_084062.1	ILMN_2722353	000730286	S	2165	TTACTAACTCCAAGGGGAAGGATCCCCTGCCCCAACACCCCTATTCCTGA	4	+	115832001-115832050	4qD1	Mus musculus protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase (Pomgnt1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISO]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence ISO]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IMP]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 [goid 3827] [evidence IEA]; Catalysis of the reaction: beta-D-galactosyl-1,3-(N-acetyl-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R + UDP-N-acetyl-D-glucosamine = N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R + UDP [goid 47223] [evidence ISO]	0610016I07Rik; 4930467B06Rik; RP23-319H15.3	0610016I07Rik; 4930467B06Rik; RP23-319H15.3
Mus musculus	MEEBO	ILMN_187689	ILMN_187689	3732409C05RIK	scl32168.15_64				29336027	NM_026143	3732409C05Rik		ILMN_1225008	004210615	S	961	GTGTTTTACCATGGCAGAGCTAACGAGCATAGAAAGAGGTAATATTACTG										
Mus musculus	MEEBO	ILMN_187689	ILMN_187689	3732409C05RIK	scl32168.15_64				29336027	NM_026143	3732409C05Rik		ILMN_2446290	002510435	S	10	ATACAAACATTATTGGGTGCCTTTGTTTGTAAACCAAAAAGTAATAAATG										
Mus musculus	MEEBO	ILMN_187689	ILMN_187689	3732409C05RIK	scl32168.15_64				29336027	NM_026143	3732409C05Rik		ILMN_2725969	001010221	S	940	GCAGGTGCTAACATGATGAATGTGTTTTACCATGGCAGAGCTAACGAGCA										
Mus musculus	RefSeq	ILMN_197583	ILMN_197583	EG223186	XM_139243.2	XM_139243.2		223186	38076688	XM_139243.2	EG223186	XP_139243.2	ILMN_1229179	000830270	S	27	GGAGAGAAGGTTTGAAAAAGATAGAGGAGAGTTCCTGGTGGCGGTGACCC	14	+	112880513-112880562	14qE4	PREDICTED: Mus musculus predicted gene, EG223186 (EG223186), mRNA.					
Mus musculus	RefSeq	ILMN_217917	ILMN_217917	B230219D22RIK	NM_181278.2	NM_181278.2		78521	31341429	NM_181278.2	B230219D22Rik	NP_851795.1	ILMN_2847869	003850685	S	4101	AGAGAACAGTTCAGGGGATACTACGATGATTGCTCTGTCAGTTCCTTGTC	13	+	55804310-55804359	13qB1	Mus musculus RIKEN cDNA B230219D22 gene (B230219D22Rik), mRNA.				AA119856; D530037I19Rik	AA119856; D530037I19Rik
Mus musculus	RefSeq	ILMN_223455	ILMN_223455	9930021D14RIK	NM_175682.2	NM_175682.2		319259	31342317	NM_175682.2	9930021D14Rik	NP_783613.1	ILMN_2951995	000540487	S	742	CCATCTACTGGACCCAATGGGCAGAAGGGCCCCAGAGACAGCGGCTGATC	17	+	24202718-24202743:24202840-24202863	17qA3.3	Mus musculus RIKEN cDNA 9930021D14 gene (9930021D14Rik), mRNA.			Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]		
Mus musculus	Riken	ILMN_206785	ILMN_206785	6330407O08RIK	ri|6330407O08|PX00314L06|AK078057|2403					AK078057	6330407O08Rik		ILMN_1228858	000460224	S	1917	GCTGCTGCCCGCCTCACCCATACCTGGGTTTCTGTTTTGGTTTTGGAGTC										
Mus musculus	RefSeq	ILMN_217217	ILMN_217217	3110062M04RIK	NM_199145.1	NM_199145.1		78412	46559435	NM_199145.1	3110062M04Rik	NP_954596.1	ILMN_1235310	005820458	S	3439	CCTCCTTCCCCGTTTAGGGAACTGAACCTCTCCTTGGGTGAAATCACACT	6	-	34821963-34822012	6qB1	Mus musculus RIKEN cDNA 3110062M04 gene (3110062M04Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			AL023049	AL023049
Mus musculus	Riken	ILMN_202670	ILMN_202670	BCL2L2	ri|A930033L08|PX00067K14|AK020923|1137					AK020923	Bcl2l2		ILMN_2551387	004880152	S	641	TGGGCCACCCAGGTCTACAGGGAGGTCAAGGCCAGCTAAGGCTTCCTGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198417	ILMN_198417	LOC329032	XM_285291.1	XM_285291.1			28551257	XM_285291.1	LOC329032		ILMN_2531614	005900215	S	323	TTGTTGCTATGAGACAGAAGGTCACTGCAGAGGGGCCTGATCCAGACACC										
Mus musculus	RefSeq	ILMN_212099	ILMN_212099	CALD1	NM_145575.2	NM_145575.2		109624	118130169	NM_145575.2	Cald1	NP_663550.1	ILMN_2804261	004210431	S	2041	CTGAGGAATGTATGCAGTATCTAGGGGCGAAACGACCCCGTAGGCTTTGT	6	+	34723516-34723565	6qB1	Mus musculus caldesmon 1 (Cald1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell [goid 30478] [evidence IDA]	Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]	C920027I18Rik; AV071549; MGC30319; 4833423D12Rik; AI195384; AW536160	C920027I18Rik; AV071549; MGC30319; 4833423D12Rik; AI195384; AW536160
Mus musculus	RefSeq	ILMN_212099	ILMN_212099	CALD1	NM_145575.2	NM_145575.2		109624	118130169	NM_145575.2	Cald1	NP_663550.1	ILMN_1232081	005130494	S	2270	CATACCTAAATTGGCTGATTACTTTAGCTGACAGTGGTACTGACTTTTTT	6	+	34723745-34723794	6qB1	Mus musculus caldesmon 1 (Cald1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Polarized accumulation of cytoskeletal proteins (including F-actin) and regulatory proteins in a cell [goid 30478] [evidence IDA]	Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]	C920027I18Rik; AV071549; MGC30319; 4833423D12Rik; AI195384; AW536160	C920027I18Rik; AV071549; MGC30319; 4833423D12Rik; AI195384; AW536160
Mus musculus	RefSeq	ILMN_216384	ILMN_216384	GOLPH3L	NM_146133.2	NM_146133.2		229593	31543170	NM_146133.2	Golph3l	NP_666245.1	ILMN_1235179	002690017	S	2542	GGGCAAAAGCCAGGCCATGTATAATCTAGCAGCTCATATTATCTTCCCCT	3	+	95422895-95422944	3qF2.1	Mus musculus golgi phosphoprotein 3-like (Golph3l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW549227; C77637; AU015439; MGC28597; GPP34R; 2010204I15Rik	AW549227; C77637; AU015439; MGC28597; GPP34R; 2010204I15Rik
Mus musculus	RefSeq	ILMN_216509	ILMN_216509	PRDM5	NM_027547.2	NM_027547.2		70779	124286827	NM_027547.2	Prdm5	NP_081823.2	ILMN_1223783	006580494	S	1602	GCCCGTACTGTGAAAAAGGTTTCAGTAAAAATGACGGACTGAAGATGCAC	6	+	65851786-65851835	6qC1	Mus musculus PR domain containing 5 (Prdm5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	PFM2; E130112L17Rik; 6530401I24Rik; 4432417F03Rik; AI197291	PFM2; E130112L17Rik; 6530401I24Rik; 4432417F03Rik; AI197291
Mus musculus	RefSeq	ILMN_216659	ILMN_216659	PRPF19	NM_134129.2	NM_134129.2		28000	25092690	NM_134129.2	Prpf19	NP_598890.1	ILMN_2934533	003060390	S	1672	AGGCCCTATGCCTTCTCACAGTTCTGGGCCTCATCTCAGTAGTGGGTTAG	19	+	10972176-10972177:10972178-10972225	19qA	Mus musculus PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) (Prpf19), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence ISA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of astrocyte differentiation [goid 48711] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence ISA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IDA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence ISO]	Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Snev; prp19 beta; D19Wsu55e; Prp19; PSO4; NMP200; AA617263; AL024362	Snev; prp19 beta; D19Wsu55e; Prp19; PSO4; NMP200; AA617263; AL024362
Mus musculus	RefSeq	ILMN_216659	ILMN_216659	PRPF19	NM_134129.2	NM_134129.2		28000	25092690	NM_134129.2	Prpf19	NP_598890.1	ILMN_2934532	007050072	S	1916	CCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAG	19	+	10972420-10972469	19qA	Mus musculus PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) (Prpf19), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence ISA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of astrocyte differentiation [goid 48711] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence ISA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IDA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence ISO]	Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Snev; prp19 beta; D19Wsu55e; Prp19; PSO4; NMP200; AA617263; AL024362	Snev; prp19 beta; D19Wsu55e; Prp19; PSO4; NMP200; AA617263; AL024362
Mus musculus	RefSeq	ILMN_216659	ILMN_216659	PRPF19	NM_134129.2	NM_134129.2		28000	25092690	NM_134129.2	Prpf19	NP_598890.1	ILMN_2934534	006100768	S	1842	TGCTATCCATGCAGCCTTTGGGCCCCAGGGAACGGTCACCCTGTAAAGTG	19	+	10972346-10972395	19qA	Mus musculus PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) (Prpf19), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence ISA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of astrocyte differentiation [goid 48711] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence ISA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IDA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence ISO]	Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Snev; prp19 beta; D19Wsu55e; Prp19; PSO4; NMP200; AA617263; AL024362	Snev; prp19 beta; D19Wsu55e; Prp19; PSO4; NMP200; AA617263; AL024362
Mus musculus	MEEBO	ILMN_188250	ILMN_188250	MKIAA1686	scl0001156.1_109				37360509	AK129423	mKIAA1686		ILMN_2451066	006860551	S	6	AGGGGCCCCGTGCATCTGCCTGAAGACAAGAAGATTCATCAAGTTCAAGG										
Mus musculus	RefSeq	ILMN_188455	ILMN_246401	ALDH5A1	NM_172532.2	NM_172532.2		214579	142352185	NM_172532.2	Aldh5a1	NP_766120.1	ILMN_2664660	002070243	S	1626	GTACCTAGAGGTCAAGTATGTGTGTTACGGAGGCTTGTAGGGTTCTGCAC	13	-	25003419-25003429:25003430-25003468	13qA3.1	Mus musculus aldhehyde dehydrogenase family 5, subfamily A1 (Aldh5a1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue [goid 6650] [evidence IMP]; The chemical reactions and pathways involving fatty acids with a chain length of less than 8 carbons [goid 46459] [evidence IMP]; The chemical reactions and pathways involving galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6681] [evidence IMP]; The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative [goid 6678] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; The chemical reactions and pathways involving acetate, the anion of acetic acid [goid 6083] [evidence IMP]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [evidence IMP]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IMP]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle [goid 6105] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IMP]; The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9448] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9450] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP [goid 16620] [evidence IEA]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [evidence IEA]	Ssdh1; 6330403E24Rik; D630032B01Rik; Ahd-1; Ahd1	Ssdh1; 6330403E24Rik; D630032B01Rik; Ahd-1; Ahd1
Mus musculus	MEEBO	ILMN_190097	ILMN_190097	CYP11A1	scl36891.2_185				46358369	NM_019779	Cyp11a1		ILMN_2467151	006580341	S	5	CCCCCCTTCAAGGCTGATGCATTTTTACTTTTGATGACCCCCTTTACAAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: cholesterol + reduced adrenal ferredoxin + O2 = pregnenolone + 4-methylpentanal + oxidized adrenal ferredoxin + H2O [goid 8386] [evidence IDA]		
Mus musculus	MEEBO	ILMN_218045	ILMN_218045	RNPS1	scl51016.8.1_19	NM_009070.1			6677756	NM_009070.1	Rnps1		ILMN_2690873	006350376	S	1346	GCTGGAACCTATGGCAGCACACGGATTTCCACAGATGACCCAGAACCAGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196550	ILMN_196550	2700008B19RIK	XM_354634.1	XM_354634.1			38091526	XM_354634.1	2700008B19Rik		ILMN_2524787	004040372	S	4386	GGCTTGAAAACTCCCGATGGAGGGAAAACGTACTCTCCTTGCTAGCCCCA										
Mus musculus	RefSeq	ILMN_196550	ILMN_196550	2700008B19RIK	XM_354634.1	XM_354634.1			38091526	XM_354634.1	2700008B19Rik		ILMN_2524788	005130014	S	4514	CTTCCTGTCTTGTTGGCCTTTCCTCGCCTGAACAGGTCCTGGCAAGAGTC										
Mus musculus	RefSeq	ILMN_211479	ILMN_211479	CALU	NM_007594.3	NM_007594.3		12321	119672916	NM_007594.3	Calu	NP_031620.1	ILMN_2771956	003610192	S	2725	CTAACCCCAGTCTAGGAGTAATGAACATCACTGCCTTCCAGGCCCTCAAC	6	+	29326184-29326233	6qA3.3	Mus musculus calumenin (Calu), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	9530075H20Rik	9530075H20Rik
Mus musculus	RefSeq	ILMN_209011	ILMN_211479	CALU	NM_007594.3	NM_007594.3		12321	119672916	NM_007594.3	Calu	NP_031620.1	ILMN_1218668	002320356	S	1148	GACGTGAAAAGGCATATTGAGATAGTGAAATCACCCGTCCCCACTCCTCC	6	+	29324607-29324656	6qA3.3	Mus musculus calumenin (Calu), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	9530075H20Rik	9530075H20Rik
Mus musculus	RefSeq	ILMN_211479	ILMN_211479	CALU	NM_007594.3	NM_007594.3		12321	119672916	NM_007594.3	Calu	NP_031620.1	ILMN_1228287	004060154	S	2747	GAACATCACTGCCTTCCAGGCCCTCAACTGTATTGTTAAGGAGACCAGAG	6	+	29326206-29326255	6qA3.3	Mus musculus calumenin (Calu), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	9530075H20Rik	9530075H20Rik
Mus musculus	RefSeq	ILMN_195965	ILMN_254424	FAM13A	NM_153574.2	NM_153574.2		58909	70887799	NM_153574.2	Fam13a	NP_705802.1	ILMN_1224427	003360102	S	4183	CCATCCTTTGCACCAAAGGTAAATGAACTAAGATTTATTCACGACTCCCC	6	-	58883590-58883639	6qB3	Mus musculus family with sequence similarity 13, member A (Fam13a), mRNA.				Precm1; FAM13A1; AI462012	Precm1; FAM13A1; AI462012
Mus musculus	RefSeq	ILMN_238027	ILMN_238027	TAAR8A	NM_001010830.1	NM_001010830.1		215859	58082060	NM_001010830.1	Taar8a	NP_001010830.1	ILMN_2995880	004670093	S	280	GAGAGCTGCTGGTACTTTGGAGATGCATTTTGTAGCCTTCACAGTTGTTG	10	+	23796585-23796634	10qA4	Mus musculus trace amine-associated receptor 8A (Taar8a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gm230	Gm230
Mus musculus	RefSeq	ILMN_199011	ILMN_238027	TAAR8A	NM_001010830.1	NM_001010830.1		215859	58082060	NM_001010830.1	Taar8a	NP_001010830.1	ILMN_1239691	007050139	S	854	TGGGCTTCATCACTCCTGCCTATGTCTATGAAATCTGTTGCTGGGGTACC	10	+	23797159-23797208	10qA4	Mus musculus trace amine-associated receptor 8A (Taar8a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gm230	Gm230
Mus musculus	RefSeq	ILMN_192251	ILMN_192251	UBL3	NM_011908.1	NM_011908.1		24109	6755924	NM_011908.1	Ubl3	NP_036038.1	ILMN_1225658	006860753	S	5	GGGCTCCTGGCCCTCTGCAGCATCAGATGTAAATGGTCTCTAAGGTCATC	5	-	148862928-148862977	5qG3	Mus musculus ubiquitin-like 3 (Ubl3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HCG; AW108023	HCG; AW108023
Mus musculus	RefSeq	ILMN_197134	ILMN_197134	LOC215415	XM_149029.2	XM_149029.2			38074242	XM_149029.2	LOC215415		ILMN_1229649	000610326	S	1181	TCCTCCATACAGAATCAACCAAAACGAGCCTCCTCAGAAGCCACATCTCC										
Mus musculus	RefSeq	ILMN_201501	ILMN_245793	LOC673460	XM_001005636.1	XM_001005636.1		673460	94421412	XM_001005636.1	LOC673460	XP_001005636.1	ILMN_1222260	000130184	S	249	GCAGCAGCTCCAGACCCAGCAGCAGGTCCAGGTAAGCCAGAGCTGCTGGT					PREDICTED: Mus musculus similar to spindle assembly associated Sfi1 homolog isoform b (LOC673460), mRNA.					
Mus musculus	RefSeq	ILMN_217932	ILMN_217932	ACADL	NM_007381.3	NM_007381.3		11363	142372248	NM_007381.3	Acadl	NP_031407.2	ILMN_2689473	004220240	S	165	CAGGAGAATCTTTTCCTCGGAGCATGACATTTTCCGGGAGAGTGTAAGGA	1	-	66904009-66904058	1qC3	Mus musculus acyl-Coenzyme A dehydrogenase, long-chain (Acadl), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: acyl-CoA + ETF = 2,3-dehydroacyl-CoA + reduced ETF [goid 4466] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	AA960361; LCAD; C79855; AU018452	AA960361; LCAD; C79855; AU018452
Mus musculus	RefSeq	ILMN_217932	ILMN_217932	ACADL	NM_007381.3	NM_007381.3		11363	142372248	NM_007381.3	Acadl	NP_031407.2	ILMN_2735084	007160202	S	1347	GCTAATGCGGATTCTAATCTACTTGAGATAAAGTGTAACCTGGAAAAGGG	1	-	66877922-66877971	1qC3	Mus musculus acyl-Coenzyme A dehydrogenase, long-chain (Acadl), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: acyl-CoA + ETF = 2,3-dehydroacyl-CoA + reduced ETF [goid 4466] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	AA960361; LCAD; C79855; AU018452	AA960361; LCAD; C79855; AU018452
Mus musculus	RefSeq	ILMN_212574	ILMN_212574	LCAT	NM_008490.1	NM_008490.1		16816	6678671	NM_008490.1	Lcat	NP_032516.1	ILMN_2798400	001050537	S	1068	TCCCCTACAAAGACCCCGTGGCTGCACTCTATGAAGATGGGGACGACACC	8	-	108463675-108463724	8qD3	Mus musculus lecithin cholesterol acyltransferase (Lcat), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence ISO]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence ISO]; The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42158] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine [goid 4607] [evidence IDA]; Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine [goid 4607] [evidence ISO]; Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine [goid 4607] [evidence IDA]; Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine [goid 4607] [evidence IDA]	AI046659; D8Wsu61e	AI046659; D8Wsu61e
Mus musculus	RefSeq	ILMN_212574	ILMN_212574	LCAT	NM_008490.1	NM_008490.1		16816	6678671	NM_008490.1	Lcat	NP_032516.1	ILMN_2798402	004810072	S	951	ACATGTTTCTTCAGTCTCGTGACCTACTGGAGCGCCTCCCCGCACCTGGT	8	-	108463792-108463841	8qD3	Mus musculus lecithin cholesterol acyltransferase (Lcat), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence ISO]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence ISO]; The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42158] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine [goid 4607] [evidence IDA]; Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine [goid 4607] [evidence ISO]; Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine [goid 4607] [evidence IDA]; Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine [goid 4607] [evidence IDA]	AI046659; D8Wsu61e	AI046659; D8Wsu61e
Mus musculus	RefSeq	ILMN_212410	ILMN_212410	MYO7B	NM_032394.2	NM_032394.2		17922	141803316	NM_032394.2	Myo7b	NP_115770.1	ILMN_2626106	005420477	S	6381	TGACCTCATATGTACAGCAGCTCCTGAATACAGTGAACAAACAGCGGGGC	18	-	32119084-32119133	18qB1	Mus musculus myosin VIIb (Myo7b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a beta-lactam antibiotic, any member of a class of natural or semisynthetic antibiotics whose characteristic feature is a strained, four-membered beta-lactam ring. They include the penicillins and many of the cephalosporins [goid 30655] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a beta-lactam + H2O = a substituted beta-amino acid [goid 8800] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197716	ILMN_313092	LOC100045890	XM_001474956.1	XM_001474956.1		100045890	149251545	XM_001474956.1	LOC100045890	XP_001475006.1	ILMN_1245598	000780040	S	40	GGCAGCCAGCAGGAGGCTGATGAAGGAGCTTGAAGAGATCCGCAAATGTG					PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme UbcH7 (LOC100045890), mRNA.					
Mus musculus	RefSeq	ILMN_185333	ILMN_253303	RSPO4	NM_001040689.1	NM_001040689.1		228770	100817772	NM_001040689.1	Rspo4	NP_001035779.1	ILMN_1244053	002850433	S	864	CTCGCCGCACTTCCACAGTGGGCTCCTCGCTTCTCCCCTGTCCAGCTCTT	2	+	151698897-151698946	2qG3	Mus musculus R-spondin family, member 4 (Rspo4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	A730099F22; A930029K19Rik	A730099F22; A930029K19Rik
Mus musculus	RefSeq	ILMN_186253	ILMN_249878	GLCE	NM_033320.4	NM_033320.4		93683	133892759	NM_033320.4	Glce	NP_201577.3	ILMN_2433946	000770307	S	4393	CAAATATGCAATAATGTGTTTACTGGATGCCCTCCTGGAGGGTGGTCCTC	9	-	61905238-61905287	9qB	Mus musculus glucuronyl C5-epimerase (Glce), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heparin, any member of a group of glycosaminoglycans of average Mr (6000-20000), consisting predominantly of alternating alpha1->4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 30210] [evidence IDA]; The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule [goid 16857] [evidence IDA]; Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule [goid 16857] [evidence IMP]; Catalysis of the reaction: UDP-glucuronate = UDP-L-iduronate [goid 50379] [evidence ISS]	Hsepi; 1110017N23Rik; C130034A12Rik; AI747411	Hsepi; 1110017N23Rik; C130034A12Rik; AI747411
Mus musculus	RefSeq	ILMN_201356	ILMN_201356	LOC382524	XM_356550.1	XM_356550.1			38091647	XM_356550.1	LOC382524		ILMN_1255075	005050487	S	689	CCAGAGGCTTTGGCTTTCTAGCTTACCTGAGGAACATCTCCAATGAGGTG										
Mus musculus	RefSeq	ILMN_197947	ILMN_197947	LOC332175	XM_285173.2	XM_285173.2			38079796	XM_285173.2	LOC332175		ILMN_1213349	006370280	S	1909	AGACCGCCTGTCGGTCAGAACATTGACACCGATACTATTAAGACGGTCAG										
Mus musculus	RefSeq	ILMN_198555	ILMN_198555	GM362	XM_141720.2	XM_141720.2		236774	38086140	XM_141720.2	Gm362	XP_141720.2	ILMN_1222972	004210088	S	1489	ATGCCACAAGGGACTGGCAAGAACCAGAGCCAGAGACAGAAGGAAGAGCC	X	+	40945825-40945874	XqA4	PREDICTED: Mus musculus gene model 362, (NCBI) (Gm362), mRNA.					
Mus musculus	RefSeq	ILMN_221513	ILMN_221513	LEPR	NM_146146.1	NM_146146.1		16847	28077100	NM_146146.1	Lepr	NP_666258.1	ILMN_2736578	000150739	S	3123	GCAACCCACCATGATTTCACCACAACTTTCATTCTCGGGGTTGGATGAGC	4	+	101487508-101487557	4qC6	Mus musculus leptin receptor (Lepr), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IGI]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence TAS]	db; LEPROT; OB-RGRP; obl; Obr; MGC105189; obese-like; diabetes	db; LEPROT; OB-RGRP; obl; Obr; MGC105189; obese-like; diabetes
Mus musculus	MEEBO	ILMN_187773	ILMN_187773	1810037K07RIK	scl23949.4_43				13385455	NM_025962	1810037K07Rik		ILMN_2446990	006370682	S	18	AGATAGTTTCCCAATTCTGATATTTCAAATTTCACTCCCAGGGTCCAGGG										
Mus musculus	RefSeq	ILMN_200877	ILMN_200877	LOC385420	XM_358232.1	XM_358232.1			38086761	XM_358232.1	LOC385420		ILMN_1242330	006510193	S	339	CCAGGAAGGCATGAGGTACTGCAAGGGCAGCATCAGTTTGGCCCTGAAGC										
Mus musculus	Riken	ILMN_207424	ILMN_207424	4832404E22RIK	ri|4832404E22|PX00638E24|AK076428|2773					AK076428	4832404E22Rik		ILMN_1235864	004220202	S	2423	GGAATGTAAGGACTCAGGTTGGCAGAGGTGAGGGGAGGGACACACTTTGT										
Mus musculus	RefSeq	ILMN_222066	ILMN_315729	LOC100040525	XR_031953.1	XR_031953.1		100040525	149268303	XR_031953.1	LOC100040525		ILMN_2744121	000070608	S	1356	TTACTTGTACACGCTGGCCTTTGTGTACTCTCCGTCGAAGAATGCCCTGT	17	+	6642620-6642669	17qA1	PREDICTED: Mus musculus similar to G protein-coupled receptor 178 (LOC100040525), misc RNA.					
Mus musculus	RefSeq	ILMN_208785	ILMN_208785	OLFR98	NM_146510.1	NM_146510.1		258503	33239259	NM_146510.1	Olfr98	NP_666721.1	ILMN_2589485	004610754	S	581	GTCTGATGATGGCTTTGAGTGGACTTTTAGCAATCAGTGCATTTCTCTGC	17	-	37448651-37448700	17qB1	Mus musculus olfactory receptor 98 (Olfr98), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR156-4	MOR156-4
Mus musculus	RefSeq	ILMN_220031	ILMN_220031	EREG	NM_007950.2	NM_007950.2		13874	119709826	NM_007950.2	Ereg	NP_031976.1	ILMN_2735702	000010196	S	694	CATGTTAATAATATTTATGTTGGGTCATCTGTTAGGTCAATAACTATATT	5	+	91519233-91519282	5qE1	Mus musculus epiregulin (Ereg), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection [goid 45089] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [evidence ISS]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor activity [goid 45741] [evidence ISS]; Any process that activates or increases the rate or extent of smooth muscle cell proliferation [goid 48661] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of production of a cytokine [goid 1819] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IDA]	MGC36144	MGC36144
Mus musculus	RefSeq	ILMN_216962	ILMN_244526	PGLYRP3	NM_207247.2	NM_207247.2		242100	142361343	NM_207247.2	Pglyrp3	NP_997130.1	ILMN_2677504	002100368	S	821	CTCATACCTATGGATACAACGATATTGCTCTAGGAATTGCCTTCATGGGA	3	+	91834613-91834662	3qF1	Mus musculus peptidoglycan recognition protein 3 (Pglyrp3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [evidence IEA]	Catalysis of the hydrolysis of the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell-wall glycopeptides [goid 8745] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm420	Gm420
Mus musculus	MEEBO	ILMN_189984	ILMN_189984	WFDC1	scl33257.7.1_7	NM_023395.1			12963658	NM_023395.1	Wfdc1		ILMN_2466164	004540598	S	9	GAACCTGCAGCTTCTAGGTGACTTTGGCAGATTTTGCCTGCGGAAGGCAT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]		
Mus musculus	RefSeq	ILMN_228707	ILMN_228707	SETD6	NM_001035123.1	NM_001035123.1		66083	78097103	NM_001035123.1	Setd6	NP_001030295.1	ILMN_2983669	005090195	S	1265	CGGCTTCTTCGAAACAGTGTTCTGTTGACCCTACAGACCTACACCACAGA	8	+	98607729-98607778	8qD1	Mus musculus SET domain containing 6 (Setd6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			3110004G14Rik; C76402; 0610039J04Rik; AI413388	3110004G14Rik; C76402; 0610039J04Rik; AI413388
Mus musculus	RefSeq	ILMN_229213	ILMN_229213	SLC28A2	NM_172980.1	NM_172980.1		269346	27370487	NM_172980.1	Slc28a2	NP_766568.1	ILMN_2843286	003780747	S	2196	GGTTGCCTGGTTCCTGCAAATTACCATGGGTACCACTGCTGCAGAGACCC	2	+	122143925-122143974	2qE5	Mus musculus solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 (Slc28a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, into, out of, within or between cells [goid 15860] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nucleoside(out) + Na+(out) = nucleoside(in) + Na+(in) [goid 5415] [evidence IEA]; Interacting selectively with a nucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked either to ribose or deoxyribose [goid 1882] [evidence IEA]; Catalysis of the transfer of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, from one side of a membrane to the other [goid 15211] [evidence IDA]	BB152493; B430217P18; 2010208B10Rik; Cnt2	BB152493; B430217P18; 2010208B10Rik; Cnt2
Mus musculus	RefSeq	ILMN_219021	ILMN_246459	A930024E05RIK	XR_005345.1	XR_005345.1		109202	94376661	XR_005345.1	A930024E05Rik		ILMN_1216220	004010093	S	1167	GGTGTTGGGTGTGATAGGTAATCACTTAGCTACATCACCCACATCCCTGC					PREDICTED: Mus musculus RIKEN cDNA A930024E05 gene (A930024E05Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_194381	ILMN_194381	V1RD6	NM_030738.1	NM_030738.1		81013	13507699	NM_030738.1	V1rd6	NP_109663.1	ILMN_2971043	002340682	S	2394	CCCAGCTATCAGTTGAAGTTTTTCTGTGAGGAGCCGCCCTTGCAATCGCC	7	-	5959590-5959639	7qA1	Mus musculus vomeronasal 1 receptor, D6 (V1rd6), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	V3R6	V3R6
Mus musculus	RefSeq	ILMN_199707	ILMN_199707	LOC383856	XM_357295.1	XM_357295.1			38076282	XM_357295.1	LOC383856		ILMN_2536188	002320309	S	119	GCCAGAGGGAAGTGGATACGAGGGGAGGTGAAGACAGAGCCAGTTCCCCC										
Mus musculus	RefSeq	ILMN_221621	ILMN_232239	RPL26	NM_009080.2	NM_009080.2		19941	130500915	NM_009080.2	Rpl26	NP_033106.1	ILMN_2737941	001050497	S	138	TTCGGAGGAAGATCATGTCTTCCCCTCTTTCCAAAGAGCTGAGACAGAAG	11	+	68715850-68715899	11qB3	Mus musculus ribosomal protein L26 (Rpl26), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SIG-20	SIG-20
Mus musculus	RefSeq	ILMN_219745	ILMN_219745	RAE1	NM_175112.4	NM_175112.4		66679	146198565	NM_175112.4	Rae1	NP_780321.1	ILMN_2713130	000540563	S	1355	GCCTGAAGCTGGGACTGTTGGAGTTTCATCTCCTCTCTGCCCAAACTTGG				2qH3	Mus musculus RAE1 RNA export 1 homolog (S. pombe) (Rae1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MNRP41; 41; MNRP; D2Ertd342e; 3230401I12Rik	MNRP41; 41; MNRP; D2Ertd342e; 3230401I12Rik
Mus musculus	RefSeq	ILMN_215569	ILMN_215569	TBC1D12	NM_145952.3	NM_145952.3		209478	119943132	NM_145952.3	Tbc1d12	NP_666064.3	ILMN_2661116	004610424	S	2638	TTATCTCCAGTTCTGAGCTTGGGAAGATATTCTAGACCAGTAGTAAGCAA	19	+	38992842-38992891	19qC3	Mus musculus TBC1D12: TBC1 domain family, member 12 (Tbc1d12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	MGC38216; BC033574	MGC38216; BC033574
Mus musculus	Riken	ILMN_204753	ILMN_204753	B930044G13RIK	ri|B930044G13|PX00164G21|AK047270|3199					AK047270	B930044G13Rik		ILMN_1245397	002030241	S	3129	TGTGTGGGAGTGTATGTACATAAGGACCAGTTGTCTCTCAGTCAAATGGG										
Mus musculus	RefSeq	ILMN_186321	ILMN_260716	BRI3BP	NM_029752.2	NM_029752.2		76809	79749982	NM_029752.2	Bri3bp	NP_084028.1	ILMN_2434540	003830360	S	6403	TCGACTTTAAGAATTGGATTAAAATATTGTGAACATTGCGGCTTAATAAA	5	+	125940670-125940719	5qG1.1	Mus musculus Bri3 binding protein (Bri3bp), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2410150I18Rik; AW742481; AI841257	2410150I18Rik; AW742481; AI841257
Mus musculus	RefSeq	ILMN_218102	ILMN_260716	BRI3BP	NM_029752.2	NM_029752.2		76809	79749982	NM_029752.2	Bri3bp	NP_084028.1	ILMN_1237243	001400470	S	2307	GATGCTCTAGGCATATCTACTCGCGGCACAGGGTGGAAGTAGCCGAGAAG	5	+	125936574-125936623	5qG1.1	Mus musculus Bri3 binding protein (Bri3bp), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2410150I18Rik; AW742481; AI841257	2410150I18Rik; AW742481; AI841257
Mus musculus	RefSeq	ILMN_210348	ILMN_210348	SLC26A8	NM_146076.1	NM_146076.1		224661	22122572	NM_146076.1	Slc26a8	NP_666188.1	ILMN_2604723	001740092	S	1978	CTGCCATCTGACAAGGTAGATAACATTGTCTCTATTTTGTACACGGGGAC	17	-	28800623-28800672	17qA3.3	Mus musculus solute carrier family 26, member 8 (Slc26a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	 [goid 15380] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	MGC38861	MGC38861
Mus musculus	RefSeq	ILMN_210348	ILMN_210348	SLC26A8	NM_146076.1	NM_146076.1		224661	22122572	NM_146076.1	Slc26a8	NP_666188.1	ILMN_1230768	004070360	S	1164	GTGCATCCGCATTACCTTCAACCGCTACCCTATCGAGTTCCCCATGGAGC	17	-	28813009-28813058	17qA3.3	Mus musculus solute carrier family 26, member 8 (Slc26a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	 [goid 15380] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	MGC38861	MGC38861
Mus musculus	RefSeq	ILMN_199001	ILMN_199001	LOC237343	XM_137047.2	XM_137047.2			38090424	XM_137047.2	LOC237343		ILMN_1216685	006510075	S	773	CTCCCATGGTGGTAGCCACTAAACACTGTACCAATGAGCTCTTCACTGCC										
Mus musculus	RefSeq	ILMN_219768	ILMN_219768	BC067068	NM_207522.1	NM_207522.1		216292	46430505	NM_207522.1	BC067068	NP_997405.1	ILMN_2713396	001510241	S	1679	GGCTCCTTGCATAGAAACACTGATTCTTCTTGATCGACTTTGTTACCTGA	10	-	105202283-105202332	10qD1	Mus musculus cDNA sequence BC067068 (BC067068), mRNA.					
Mus musculus	Riken	ILMN_204768	ILMN_204768	B930051D08RIK	ri|B930051D08|PX00164O01|AK047340|1317					AK047340	B930051D08Rik		ILMN_1230879	003130274	S	928	TTGGAAATGTATCGCTGCCATCTTACTCTCCCACGCGAAGCAGCATGCGC										
Mus musculus	RefSeq	ILMN_214773	ILMN_214773	1100001G20RIK	NM_183249.2	NM_183249.2		66107	126365757	NM_183249.2	1100001G20Rik	NP_899072.1	ILMN_2651743	001300707	S	317	GGAGCTCTGTGACCAAGAAAACAGTTGAAAATGGAGGCCATGTATGGAGA	11	+	83566027-83566076	11qC	Mus musculus RIKEN cDNA 1100001G20 gene (1100001G20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218014	ILMN_218014	GALNT7	NM_144731.3	NM_144731.3		108150	141802107	NM_144731.3	Galnt7	NP_653332.2	ILMN_1222366	006100598	S	3470	CATGTAATCATGGTATCGATGACAGAAATTCACAAACTACTGCCAGAAGG	8	-	60003390-60003439	8qB2	Mus musculus UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 (Galnt7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IDA]	AI225872	AI225872
Mus musculus	RefSeq	ILMN_222966	ILMN_222966	NOLA1	NM_026578.2	NM_026578.2		68147	142366408	NM_026578.2	Nola1	NP_080854.1	ILMN_1226280	000150100	S	925	CCGCTTTGTACAGAACCTGGCACTCTGTGGGTGCTTAGAGAAGACAGGAC	3	-	129527886-129527935	3qG3	Mus musculus nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) (Nola1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A structure found in the nucleolus, which contains newly synthesized preribosomal RNA (pre-rRNA) and a collection of proteins [goid 1651] [evidence ISO]; A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with small nucleolar RNA [goid 30515] [evidence ISO]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]	AA409823; GAR1; AI326794; C430047J18Rik	AA409823; GAR1; AI326794; C430047J18Rik
Mus musculus	RefSeq	ILMN_188624	ILMN_239205	ATP2C2	XM_917337.3	XM_917337.3		69047	149259368	XM_917337.3	Atp2c2	XP_922430.3	ILMN_1257530	003420753	S	3157	ACAGGGTGGAGCTTATTATACTGAAACGTGGCGCTATTTATTAAACCACC				8qE1	PREDICTED: Mus musculus ATPase, Ca++ transporting, type 2C, member 2, transcript variant 3 (Atp2c2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211991	ILMN_211991	SH3PXD2A	NM_008018.2	NM_008018.2		14218	142351646	NM_008018.2	Sh3pxd2a	NP_032044.1	ILMN_1227918	006450767	S	3470	GGATGTGTACATCTCGATTGCAGACTATGAGGGGGACGAAGAGACGGCTG	19	-	47341608-47341657	19qC3-qD1	Mus musculus SH3 and PX domains 2A (Sh3pxd2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC144076; Fish; Sh3md1	MGC144076; Fish; Sh3md1
Mus musculus	MEEBO	ILMN_187114	ILMN_187114	1700095D18RIK	scl2145.1.1_113						1700095D18Rik		ILMN_2441282	000460048	S	9	TGCCAGCACCCGCTGACATCACGGAGCCCTGGGCCGGGTCTGGGCCCCGC										
Mus musculus	RefSeq	ILMN_217814	ILMN_316257	2410075B13RIK	XR_035296.1	XR_035296.1		223648	149266973	XR_035296.1	2410075B13Rik		ILMN_2687918	002060600	S	2031	CGAGGAGGCAGGCCAGTAGGGCATAGGGTGGAGGACAAACCTTGGAAGAT				15qD3	PREDICTED: Mus musculus RIKEN cDNA 2410075B13 gene (2410075B13Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_201104	ILMN_201104	LOC382003	XM_358689.1	XM_358689.1			38089157	XM_358689.1	LOC382003		ILMN_1221289	003780025	S	600	GAAACCCAAGGTCTTCCAACTACAGCTCGCAAAGATGCCACAGGACGATG										
Mus musculus	MEEBO	ILMN_192945	ILMN_192945	SCL0004158.1_6	scl0004158.1_6	AK017777.1			12857193	AK017777.1	scl0004158.1_6		ILMN_2492786	003390189	S	20	GGTTAATGCAGTCCAGTTTGCCAGTCTTTCTTTTGGCGGGTAGTGCTGTC										
Mus musculus	Riken	ILMN_206550	ILMN_206550	C230055K21RIK	ri|C230055K21|PX00176A15|AK082487|1881					AK082487	C230055K21Rik		ILMN_1241880	002070180	S	48	GAAAGTGCTTTGGCGGTTTGTACGGCGGTGGCTCGGGCTTTCGGGACCGA										
Mus musculus	MEEBO	ILMN_184193	ILMN_184193	MPP7	scl15048.1.1_2				51770762	XM_128966	Mpp7		ILMN_2416620	000630192	S	3	GCTTGTTTCTGGGGTGCAGTGCCAGCCACTATTAGAAAAGCAGGGTTTCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213653	ILMN_213653	TAF12	NM_025579.2	NM_025579.2		66464	142364052	NM_025579.2	Taf12	NP_079855.1	ILMN_1238852	007000184	S	779	ATCTATAATGACTGAGAAGATCTGCCAAAAGAATAAAGCCTCCTGCCCAC	4	+	131848711-131848760	4qD2.3	Mus musculus TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	 [goid 16986] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Taf2J; AW557038; 20kDa; 2810422D08Rik	Taf2J; AW557038; 20kDa; 2810422D08Rik
Mus musculus	RefSeq	ILMN_209574	ILMN_209574	CSDE1	NM_144901.2	NM_144901.2		229663	40254097	NM_144901.2	Csde1	NP_659150.1	ILMN_2945483	003990411	S	3770	CCAGTGCCCTGTTCAATACAGGCACTTGATCCTTGGTGTAGCTTCTGTTC	3	+	102861766-102861815	3qF2.2	Mus musculus cold shock domain containing E1, RNA binding (Csde1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC19174; BC016898; AA960392; mKIAA0885; D3Jfr1; unr	MGC19174; BC016898; AA960392; mKIAA0885; D3Jfr1; unr
Mus musculus	RefSeq	ILMN_209574	ILMN_209574	CSDE1	NM_144901.2	NM_144901.2		229663	40254097	NM_144901.2	Csde1	NP_659150.1	ILMN_2670662	006840458	S	811	TCCAGCTGCCCCGGGTCAGAGTCCAACAGGGAGTGTATGCTACGAACGTA	3	+	102844402-102844451	3qF2.2	Mus musculus cold shock domain containing E1, RNA binding (Csde1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC19174; BC016898; AA960392; mKIAA0885; D3Jfr1; unr	MGC19174; BC016898; AA960392; mKIAA0885; D3Jfr1; unr
Mus musculus	RefSeq	ILMN_209574	ILMN_209574	CSDE1	NM_144901.2	NM_144901.2		229663	40254097	NM_144901.2	Csde1	NP_659150.1	ILMN_1226468	006580369	S	3830	CACGGGAACGGATTGGCCTGATTTCTCGGCCTTCATCTTGAATTGGCCCC	3	+	102861826-102861875	3qF2.2	Mus musculus cold shock domain containing E1, RNA binding (Csde1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC19174; BC016898; AA960392; mKIAA0885; D3Jfr1; unr	MGC19174; BC016898; AA960392; mKIAA0885; D3Jfr1; unr
Mus musculus	RefSeq	ILMN_228694	ILMN_228694	OLFM1	NM_001038612.1	NM_001038612.1		56177	84370348	NM_001038612.1	Olfm1	NP_001033701.1	ILMN_3091574	006220386	A	669	CAAGCAGGTGGAGGAGAGCCATAAGCAGCATCTAGCCAGGCAGTTCAAGG	2	+	28068159-28068207:28069621-28069621	2qA3	Mus musculus olfactomedin 1 (Olfm1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pancortin3; Noe1; AW742568; Pancortin; AMY; OlfA	Pancortin3; Noe1; AW742568; Pancortin; AMY; OlfA
Mus musculus	RefSeq	ILMN_199276	ILMN_249865	LOC546233	XM_001001548.1	XM_001001548.1		546233	94419739	XM_001001548.1	LOC546233	XP_001001548.1	ILMN_1233975	000830138	S	144	CTGTAGTAGCTCTTGGAACTGAGTCCCTCACCTGACTCCTGTGGTTGCCT					PREDICTED: Mus musculus similar to X-linked eukaryotic translation initiation factor 1A (LOC546233), mRNA.					
Mus musculus	RefSeq	ILMN_199667	ILMN_199667	LOC383806	XM_357266.1	XM_357266.1			38075811	XM_357266.1	LOC383806		ILMN_1216017	000430497	S	344	GAACCAGCAGGCGTCTCAGTTCTCATGTCCGCTCTCGCGTCACACCTTGT										
Mus musculus	RefSeq	ILMN_197861	ILMN_197861	LOC329984	XM_285846.7	XM_285846.7		329984	149253259	XM_285846.7	LOC329984	XP_285846.5	ILMN_1251942	005050026	S	1209	CGTCTGTCCTAATGAACCTTCTGCATCACACAGCCAACCTAAGCCAGCTG	4	-	143538885-143538934	4qE1	PREDICTED: Mus musculus hypothetical LOC329984 (LOC329984), mRNA.					
Mus musculus	RefSeq	ILMN_200090	ILMN_200090	LOC381650	XM_355613.1	XM_355613.1			38080302	XM_355613.1	LOC381650		ILMN_1243933	001300468	S	673	GTGCCATATCTCACTCTGGAACAGTCGCAGCTCATAGTCTGGCTCCTTGG										
Mus musculus	MEEBO	ILMN_216088	ILMN_216088	RGS11	scl50958.11.1_13	XM_128488.3			28498826	XM_128488.3	Rgs11		ILMN_2667199	003290725	S	1660	CTCCTCAGGCTAAACCCAGTGGCTTCTTAGGAGACGATGTCTGCAGGTGC						Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]		
Mus musculus	Riken	ILMN_202367	ILMN_202367	RPGRIP1	ri|4930505G06|PX00033A10|AK015701|905					AK015701	Rpgrip1		ILMN_1260210	004490468	S	694	CAGCCGCATCAAACAGCTGGAAGGTGATTTCAATCTCACAGACTCTGGGG						A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_258414	ILMN_258414	ATAD4	NM_146026.1	NM_146026.1		217138	22122504	NM_146026.1	Atad4	NP_666138.1	ILMN_2788191	006380608	S	1205	TGACCGGCCCAAGGGTCCAAACTGGAGGAGTGGATGCGGGTTTCTCCTGA	11	+	96796804-96796853	11qD	Mus musculus ATPase family, AAA domain containing 4 (Atad4), mRNA.				MGC37495; BC022765; E230006A12Rik	MGC37495; BC022765; E230006A12Rik
Mus musculus	RefSeq	ILMN_188176	ILMN_258414	ATAD4	NM_146026.1	NM_146026.1		217138	22122504	NM_146026.1	Atad4	NP_666138.1	ILMN_1246558	000110228	S	909	CGCTGCATCCTCTACTTTCTCTACCGTGTGACTGTTGCCTGGGCCAATCC	11	+	96796508-96796557	11qD	Mus musculus ATPase family, AAA domain containing 4 (Atad4), mRNA.				MGC37495; BC022765; E230006A12Rik	MGC37495; BC022765; E230006A12Rik
Mus musculus	Riken	ILMN_207289	ILMN_207289	4631416M11RIK	ri|4631416M11|PX00637A20|AK076249|2918					AK076249	4631416M11Rik		ILMN_1254009	000380241	S	2718	GCCACCACTGCCCAGCTCATAAGGTTCTGATAGTTACGCAAGGTAAAGGC										
Mus musculus	Riken	ILMN_204172	ILMN_204172	A230024N07RIK	ri|A230024N07|PX00127C15|AK038524|2359					AK038524	A230024N07Rik		ILMN_1248338	000430241	S	2187	GAATCCAGAAAACAGTGAAGCAGAGCCTGTGAGAGGCAGTCCTGAGGGGG										
Mus musculus	RefSeq	ILMN_204027	ILMN_320465	SIGLECG	NM_172900.3	NM_172900.3		243958	151301229	NM_172900.3	Siglecg	NP_766488.2	ILMN_1221224	005050288	S	818	AGGACTGTCCGACTAAGAGTGGCCTATGCCCCCAGATCTCTTGCTATCAG				7qB4	Mus musculus sialic acid binding Ig-like lectin G (Siglecg), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	mSiglec-G; A630096C01Rik; Siglec10; Siglec-G; 9830164H23	mSiglec-G; A630096C01Rik; Siglec10; Siglec-G; 9830164H23
Mus musculus	RefSeq	ILMN_214483	ILMN_320465	SIGLECG	NM_172900.3	NM_172900.3		243958	151301229	NM_172900.3	Siglecg	NP_766488.2	ILMN_2648454	002850553	S	2096	GAGAATAACCCGGAAGAACTCCACTATGCTGCTCTCAACTTCTCCCGCCT				7qB4	Mus musculus sialic acid binding Ig-like lectin G (Siglecg), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	mSiglec-G; A630096C01Rik; Siglec10; Siglec-G; 9830164H23	mSiglec-G; A630096C01Rik; Siglec10; Siglec-G; 9830164H23
Mus musculus	RefSeq	ILMN_210549	ILMN_319247	LOC100046163	XM_001475710.1	XM_001475710.1		100046163	149260420	XM_001475710.1	LOC100046163	XP_001475760.1	ILMN_2672325	001770379	S	313	TGCCCACAAAGATGCCATCCAACTTTGGAGGACACTGATGGGACCCACCA					PREDICTED: Mus musculus similar to Nme6 protein (LOC100046163), mRNA.					
Mus musculus	RefSeq	ILMN_210549	ILMN_319247	LOC100046163	XM_001475710.1	XM_001475710.1		100046163	149260420	XM_001475710.1	LOC100046163	XP_001475760.1	ILMN_2606711	004860438	S	182	ATTGTACGAACGAGGGAACTGCAGTGGAAGCTGGAGGACTGCCGGAGGTT					PREDICTED: Mus musculus similar to Nme6 protein (LOC100046163), mRNA.					
Mus musculus	MEEBO	ILMN_194895	ILMN_194895	ENTPD7	scl53103.12_0				47824881	NM_053103	Entpd7		ILMN_1216068	004830243	S	2556	TCCTTGCTTACTTGACAAGCCATTGTGGATGTGCTCGGAGATTACCAGCC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of a ribonucleoside diphosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with diphosphate on its glycose moiety [goid 9191] [evidence ISO]; The chemical reactions and pathways resulting in the breakdown of a ribonucleoside triphosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with triphosphate on its glycose moiety [goid 9203] [evidence ISO]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence ISO]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188070	ILMN_188070	ZFP354A	NM_009329.3	NM_009329.3		21408	113374174	NM_009329.3	Zfp354a	NP_033355.2	ILMN_2480678	005690661	S	3844	GATCCTCCGTTGAAAAAAGTTGTGTTGCCTTTTGCTGATCCAGACCCAGA	11	+	50886116-50886165	11qB1.3	Mus musculus zinc finger protein 354A (Zfp354a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	kid1; AW488485; Tcf17; MGC91222	kid1; AW488485; Tcf17; MGC91222
Mus musculus	RefSeq	ILMN_188070	ILMN_188070	ZFP354A	NM_009329.3	NM_009329.3		21408	113374174	NM_009329.3	Zfp354a	NP_033355.2	ILMN_2449563	004290673	S	2344	GGAGTGCGCTGGACTTCTCAGTAGCAAAACACTAAACTCTACTGTGGTGA	11	+	50884616-50884665	11qB1.3	Mus musculus zinc finger protein 354A (Zfp354a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	kid1; AW488485; Tcf17; MGC91222	kid1; AW488485; Tcf17; MGC91222
Mus musculus	RefSeq	ILMN_218171	ILMN_241204	RNF149	NM_001033135.2	NM_001033135.2		67702	142376002	NM_001033135.2	Rnf149	NP_001028307.1	ILMN_2692563	007210608	S	1955	CTTATGTGGAATTGTGAAAAGAACACTAGATGATTTTATGATTTACATTT	1	-	39608628-39608677	1qB	Mus musculus ring finger protein 149 (Rnf149), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AV037261; 1600023E10Rik; C76763; Greul4	AV037261; 1600023E10Rik; C76763; Greul4
Mus musculus	RefSeq	ILMN_200084	ILMN_200084	LOC385745	XM_358928.1	XM_358928.1			38080276	XM_358928.1	LOC385745		ILMN_1250129	005900671	S	1072	TCCAGCCTCATAGGTGGCAGAAGATGGCTTTCGTGGATATCAGTGAGAGG										
Mus musculus	RefSeq	ILMN_197973	ILMN_197973	LOC239770	XM_155903.2	XM_155903.2			38079916	XM_155903.2	LOC239770		ILMN_1258156	001780246	S	552	GGGCTCCCCTTTACTGTATCTGGCAAAGCCCCATCTGGTGAAAGACCGTG										
Mus musculus	RefSeq	ILMN_220960	ILMN_220960	SERTAD1	NM_018820.4	NM_018820.4		55942	141802555	NM_018820.4	Sertad1	NP_061290.1	ILMN_2729162	006550019	S	833	GGCGCTGACCCTTAGGACCCAGGGAGAATTGACTTGGATCTGAGTTGAGC	7	+	28274978-28274985:28274986-28275027	7qA3	Mus musculus SERTA domain containing 1 (Sertad1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	AW456625; Sei1; 1110032C13Rik; AV000455; TRIP-Br1; Sei-1	AW456625; Sei1; 1110032C13Rik; AV000455; TRIP-Br1; Sei-1
Mus musculus	MEEBO	ILMN_218945	ILMN_218945	RTN3	scl020168.1_23				51511738	NM_001003930	Rtn3		ILMN_1216437	001440327	S	1716	TCCCTGCCCACCTTACCTCACGTTTAATAAATATGGTTGTACTTTTCTTA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_194718	ILMN_247781	PDGFD	NM_027924.2	NM_027924.2		71785	141802185	NM_027924.2	Pdgfd	NP_082200.1	ILMN_2618739	002260672	S	1413	TGGCAAGAAGAAGCAAATATCATTAATTTCTATATACATAAACATAGGAA	9	+	6377137-6377186	9qA1	Mus musculus platelet-derived growth factor, D polypeptide (Pdgfd), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence ISO]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [evidence ISO]	1110003I09Rik	1110003I09Rik
Mus musculus	Riken	ILMN_204321	ILMN_204321	4732483F24RIK	ri|4732483F24|PX00052A20|AK029033|3414					AK029033	4732483F24Rik		ILMN_2564084	007570468	S	1106	CCCCAGAGTTAAGTCTGTGGGGTCATATTGCTGACTGAATTGTCTGGTGC										
Mus musculus	RefSeq	ILMN_236509	ILMN_236509	GPR114	NM_001033468.1	NM_001033468.1		382045	85701986	NM_001033468.1	Gpr114	NP_001028640.1	ILMN_2856926	004890092	S	2703	GTGGACAAGCCGTTCAGTCTCTCTGTGCCTTAGTTTCCCTATCCACAGCG	8	+	97832310-97832359	8qD1	Mus musculus G protein-coupled receptor 114 (Gpr114), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	PGR27; Gm1109	PGR27; Gm1109
Mus musculus	RefSeq	ILMN_197787	ILMN_197787	LOC223827	XM_128313.4	XM_128313.4			38078116	XM_128313.4	LOC223827		ILMN_1225088	003850242	S	518	CCCGGATGAGGAGCAAGTACTTCAAGAATGATATGACAACTGCGCGGTAC										
Mus musculus	RefSeq	ILMN_241012	ILMN_241012	OLFR704	NM_001011749.1	NM_001011749.1		257902	58801285	NM_001011749.1	Olfr704	NP_001011749.1	ILMN_2926690	006550240	S	306	CCTGGCTTTGACACTTGGTACTGCAGAGGACCTCCTTCTGTCCTTTATGG	7	+	114008801-114008850	7qE3	Mus musculus olfactory receptor 704 (Olfr704), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR283-12P	MOR283-12P
Mus musculus	RefSeq	ILMN_207171	ILMN_239612	PARP14	NM_001039530.2	NM_001039530.2		547253	142380136	NM_001039530.2	Parp14	NP_001034619.1	ILMN_1248260	007200541	S	3780	CCCAAGGCTGAAGACACACAAGGTATCTATGGGAGCCTTTCCAGCCCTAC	16	-	35845475-35845505:35846096-35846114	16qB3	Mus musculus poly (ADP-ribose) polymerase family, member 14 (Parp14), mRNA. XM_901644 XM_916789 XM_924484 XM_924488	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BC021340; KIAA1268; 1600029O10Rik; MGC29390; mKIAA1268; CoaSt6	BC021340; KIAA1268; 1600029O10Rik; MGC29390; mKIAA1268; CoaSt6
Mus musculus	MEEBO	ILMN_215907	ILMN_215907	E030007A22	scl44796.3_420				51829606	XM_488680	E030007A22		ILMN_2665017	000110201	S	1677	ATGTTACCATTTAAAAGTGACATGCTTGAGTGTCAAGTTAACAAGGGGTG										
Mus musculus	RefSeq	ILMN_215909	ILMN_215909	MAP3K14	NM_016896.3	NM_016896.3		53859	142388182	NM_016896.3	Map3k14	NP_058592.1	ILMN_2665050	005690220	S	3913	CCTAGCTGGGACTTCTCCTGGTGGGACTTGGAAACAGCTGCTTAGGACTC	11	-	103081288-103081337	11qE1	Mus musculus mitogen-activated protein kinase kinase kinase 14 (Map3k14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISO]	Nik; aly	Nik; aly
Mus musculus	RefSeq	ILMN_221307	ILMN_221307	TDRD6	NM_198418.1	NM_198418.1		210510	38259207	NM_198418.1	Tdrd6	NP_940810.1	ILMN_2733717	004290209	S	6932	GCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTACTGAA	17	-	43752361-43752410	17qB3	Mus musculus tudor domain containing 6 (Tdrd6), mRNA.	A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182) [goid 33391] [evidence IDA]; A small cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes [goid 43186] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Tdr2; AB097085	Tdr2; AB097085
Mus musculus	RefSeq	ILMN_188049	ILMN_248250	ASXL2	NM_172421.3	NM_172421.3		75302	153792092	NM_172421.3	Asxl2	NP_766009.2	ILMN_1213354	004220541	S	4396	GCGTATGTAAAGGAGGGAAGGGAAGGCTTAAAAAGTCATGTTCTTGCACC				12qA1.1	Mus musculus additional sex combs like 2 (Drosophila) (Asxl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930556B16Rik; mKIAA1685	4930556B16Rik; mKIAA1685
Mus musculus	RefSeq	ILMN_215425	ILMN_215425	CHAD	NM_007689.4	NM_007689.4		12643	145966859	NM_007689.4	Chad	NP_031715.1	ILMN_2659340	005090133	S	1416	TGGGATGACCACGTTATTACCACCTTCCTCGGTTCCCTCTGTCCCTGCCA				11qD	Mus musculus chondroadherin (Chad), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLRR4A	SLRR4A
Mus musculus	RefSeq	ILMN_211921	ILMN_211921	ABHD2	NM_018811.4	NM_018811.4		54608	40254376	NM_018811.4	Abhd2	NP_061281.3	ILMN_2877443	004540162	S	2783	GCGGACTTCTCACTCTAGGGTCCAAGTGCTCCACTTCTGGAACGTTGTGG	7	+	79234994-79235043	7qD3	Mus musculus abhydrolase domain containing 2 (Abhd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	2210009N18Rik; Labh-2; LABH2; MGC107122	2210009N18Rik; Labh-2; LABH2; MGC107122
Mus musculus	RefSeq	ILMN_211645	ILMN_211645	EGLN2	NM_053208.2	NM_053208.2		112406	21450782	NM_053208.2	Egln2	NP_444438.2	ILMN_2781805	001240192	S	1633	GTGTGGAGGGCACTAAGTATCACTGAGGAGCAACAAGGAGAGACCTCTGC	7	-	26867764-26867813	7qA3	Mus musculus EGL nine homolog 2 (C. elegans) (Egln2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]	Phd1; C85656; MGC101954; SM-20; Ier4; 0610011A13Rik	Phd1; C85656; MGC101954; SM-20; Ier4; 0610011A13Rik
Mus musculus	RefSeq	ILMN_216629	ILMN_216629	SYNJ2	NM_011523.1	NM_011523.1		20975	21362256	NM_011523.1	Synj2	NP_035653.1	ILMN_2989843	007650376	S	3729	AGGAAAGGTGTACTCGGGCATCTCCCAGTGCTTGCGTGAAGAGCTGCGCT	17	+	6035553-6035559:6043954-6043996	17qA1	Mus musculus synaptojanin 2 (Synj2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence TAS]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IDA]	SJ2; AI481647; mKIAA0348	SJ2; AI481647; mKIAA0348
Mus musculus	RefSeq	ILMN_209358	ILMN_209358	MFAP2	NM_008546.2	NM_008546.2		17150	31982203	NM_008546.2	Mfap2	NP_032572.1	ILMN_2981545	003780358	S	865	TTCTCAGTGCCTGGGGGCAGCCCTCCTCAGTCTCCTCAGGTAGGCTGTGC	4	+	140571750-140571799	4qD3	Mus musculus microfibrillar-associated protein 2 (Mfap2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins [goid 1527] [evidence IEA]			Magp1; AI893631; Magp	Magp1; AI893631; Magp
Mus musculus	RefSeq	ILMN_209358	ILMN_209358	MFAP2	NM_008546.2	NM_008546.2		17150	31982203	NM_008546.2	Mfap2	NP_032572.1	ILMN_1240458	002120292	S	125	ATCCTCTCCCCCCATTCCCGGACCATGTCCAGTACAACCACTATGGCGAC	4	+	140569717-140569766	4qD3	Mus musculus microfibrillar-associated protein 2 (Mfap2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins [goid 1527] [evidence IEA]			Magp1; AI893631; Magp	Magp1; AI893631; Magp
Mus musculus	RefSeq	ILMN_209358	ILMN_209358	MFAP2	NM_008546.2	NM_008546.2		17150	31982203	NM_008546.2	Mfap2	NP_032572.1	ILMN_2981542	005820537	S	925	GCTGGTCTGCTTGGATTTCCTACGCCCCCAGGCATGGACCACCTCTGTTT	4	+	140571810-140571859	4qD3	Mus musculus microfibrillar-associated protein 2 (Mfap2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins [goid 1527] [evidence IEA]			Magp1; AI893631; Magp	Magp1; AI893631; Magp
Mus musculus	RefSeq	ILMN_215780	ILMN_215780	EXOSC5	NM_138586.1	NM_138586.1		27998	20070391	NM_138586.1	Exosc5	NP_613052.1	ILMN_2877280	005690408	S	645	GCTGCTCATGTCCACCACCAAGGGGCTCTATTCTGACGCTGAGCTCCAAC	7	+	25375060-25375102:25376460-25376466	7qA3	Mus musculus exosome component 5 (Exosc5), mRNA.	Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [evidence IEA]	D7Wsu180e	D7Wsu180e
Mus musculus	RefSeq	ILMN_199760	ILMN_199760	LOC383893	XM_357313.1	XM_357313.1			38076959	XM_357313.1	LOC383893		ILMN_1247432	001740056	S	1000	GCAGCGAAAAAGGGGGTGTGGAGCACTGGTATGAGAAAGGTGAAGAGAGC										
Mus musculus	Riken	ILMN_204836	ILMN_204836	A130024C22RIK	ri|A130024C22|PX00121D16|AK037532|2214					AK037532	A130024C22Rik		ILMN_2567978	002470414	S	1912	GCTGATGGGGAATCTGTGACAAACTGGTATTTTGGAGAAGACACCAGAGG										
Mus musculus	RefSeq	ILMN_204956	ILMN_233622	4930422G04RIK	XM_485308.4	XM_485308.4		71643	94369850	XM_485308.4	4930422G04Rik	XP_485308.3	ILMN_1243091	006960670	S	4017	TGCAGTGCCTTCTTTGGGCCATCTTCTGTCAATGAAGTGGAGCTGCTGCC	3	+	127298853-127298902	3qG2	PREDICTED: Mus musculus RIKEN cDNA 4930422G04 gene, transcript variant 2 (4930422G04Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196343	ILMN_233622	4930422G04RIK	XM_485308.4	XM_485308.4		71643	94369850	XM_485308.4	4930422G04Rik	XP_485308.3	ILMN_2523757	005560176	S	5699	AGACGGATTGCAGCATGCAAGCCAGTGTGAACCACAGCTGGACCATCTTC	3	+	127319592-127319641	3qG2	PREDICTED: Mus musculus RIKEN cDNA 4930422G04 gene, transcript variant 2 (4930422G04Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221009	ILMN_233622	4930422G04RIK	XM_485308.4	XM_485308.4		71643	94369850	XM_485308.4	4930422G04Rik	XP_485308.3	ILMN_2729860	001770390	S	6677	GACAACCCAAGTCATTTAGTATTTATTCTGAGAATCATTTTAGAAATTAT	3	+	127320570-127320619	3qG2	PREDICTED: Mus musculus RIKEN cDNA 4930422G04 gene, transcript variant 2 (4930422G04Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192461	ILMN_192461	TSGA14	NM_031998.2	NM_031998.2		83922	31560772	NM_031998.2	Tsga14	NP_114387.1	ILMN_1228822	001510270	S	2957	CTGGTTTGCCAGTTTAACATCAGCCAGTCAGGAGGTAGACCTCTACACCC	6	-	30603830-30603879	6qA3.3	Mus musculus testis specific gene A14 (Tsga14), mRNA.		The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [evidence IEA]	AI503610; 2810431D15Rik; AI449046; 1700017E11Rik	AI503610; 2810431D15Rik; AI449046; 1700017E11Rik
Mus musculus	RefSeq	ILMN_219254	ILMN_219254	SCARA3	NM_172604.3	NM_172604.3		219151	146198634	NM_172604.3	Scara3	NP_766192.1	ILMN_2706268	000630041	S	3295	TGTGCAACTGGCTTGCACGACCCATCTACCCCTGCTGTATAATTGTCCTG				14qD1	Mus musculus scavenger receptor class A, member 3 (Scara3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			APC7; MSLR1; MSRL1; CSR; CSR1; C130058N24Rik	APC7; MSLR1; MSRL1; CSR; CSR1; C130058N24Rik
Mus musculus	Riken	ILMN_204708	ILMN_204708	MMP14	ri|A530052I09|PX00141H07|AK040968|3240					AK040968	Mmp14		ILMN_1225091	002070500	S	2845	GATCAATGAAGGCAACCAGGGTAGGGAGGATGGGGCATGGGAGAGGTTCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The proteolytic processing of an inactive enzyme to an active form [goid 31638] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213622	ILMN_213622	ST3GAL4	NM_009178.2	NM_009178.2		20443	31543702	NM_009178.2	St3gal4	NP_033204.2	ILMN_2935870	001070274	S	1739	GGGGTAGGAAAATGAATGGGCTGGTCCCAGGATGTTCATGAAAGGGACAC	9	-	34796490-34796539	9qA4	Mus musculus ST3 beta-galactoside alpha-2,3-sialyltransferase 4 (St3gal4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]	Siat4c	Siat4c
Mus musculus	MEEBO	ILMN_223487	ILMN_223487	ACTN2	scl44289.22.3_135	NM_033268.2			31981444	NM_033268.2	Actn2		ILMN_2764727	004900706	S	2842	CGGGGAAAGCGACCTCTAATGCTCTTTCTGTAATCCCTACCCTATCAGAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils [goid 5865] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IPI]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 30375] [evidence IDA];  [goid 30374] [evidence IDA]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with Z-band alternatively spliced PDZ motif protein (ZASP). ZASP is a Z-band protein specifically expressed in heart and skeletal muscle. This protein contains N-terminal PDZ domain and C-terminal LIM domain [goid 51370] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence TAS]		
Mus musculus	RefSeq	ILMN_188125	ILMN_254916	EG640530	XM_917532.3	XM_917532.3		640530	149255745	XM_917532.3	EG640530	XP_922625.3	ILMN_2449986	002510110	S	4133	CCAACATGGTGATTGCTGATGTGAAGATGCTATCTGGTTTCATCCCATTG				6qF1	PREDICTED: Mus musculus predicted gene, EG640530 (EG640530), mRNA.					
Mus musculus	RefSeq	ILMN_220666	ILMN_245696	LOC637337	XM_912981.1	XM_912981.1		637337	83009724	XM_912981.1	LOC637337	XP_918074.1	ILMN_1236660	006520706	S	9	GGGGCTGAAGTGGGTTTTCTTTGTTGTTTTTTATCAAGGTGTGCATTGTG					PREDICTED: Mus musculus similar to Ig heavy chain V-III region VH26 precursor (LOC637337), mRNA.					
Mus musculus	RefSeq	ILMN_220693	ILMN_220693	LSM10	NM_138721.1	NM_138721.1		116748	20270250	NM_138721.1	Lsm10	NP_620046.1	ILMN_2725429	005360646	S	711	GCTGTGAGGAGTACTGCGAGTGTTTGGAGTGAATCACCTCTAACGTCCCG	4	+	125775725-125775774	4qD2.2	Mus musculus U7 snRNP-specific Sm-like protein LSM10 (Lsm10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, that includes the U7 snRNA, required for the 3'-end processing of replication-dependent histone pre-mRNAs [goid 5683] [evidence ISO]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [evidence ISO]	Any process involved in forming the mature 3' end of a histone mRNA molecule [goid 6398] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with a small nuclear RNA (snRNA) [goid 17069] [evidence ISO]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Mus musculus	Riken	ILMN_207397	ILMN_207397	E230026C15RIK	ri|E230026C15|PX00675P13|AK087622|3831					AK087622	E230026C15Rik		ILMN_1250866	002750747	S	3527	ACTCAGCCTCCAAATCCACAGAATGGAGTGTGATAACAGTGGGGGACAGC										
Mus musculus	RefSeq	ILMN_225470	ILMN_225470	ARL6	NM_019665.2	NM_019665.2		56297	31980972	NM_019665.2	Arl6	NP_062639.2	ILMN_3163134	000870753	A	721	AGCCGTGGCATATTTGTGCTAGTGACGCCATCAAAGGAGAAGGCCTGCAG	16	-	59618643-59618676:59621045-59621060	16qC1.3	Mus musculus ADP-ribosylation factor-like 6 (Arl6), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence ISS]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]	1110018H24Rik; 2210411E14Rik	1110018H24Rik; 2210411E14Rik
Mus musculus	RefSeq	ILMN_222682	ILMN_222682	HAPLN1	NM_013500.3	NM_013500.3		12950	46048400	NM_013500.3	Hapln1	NP_038528.2	ILMN_2753342	007380470	S	4036	GCAGCCATACTGGATTTCTTGATTTCAGTACTCCTAAAAGCATGCTGGTG	13	+	89750571-89750620	13qC3	Mus musculus hyaluronan and proteoglycan link protein 1 (Hapln1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BB099155; Crtl1l; Crtl1; LP	BB099155; Crtl1l; Crtl1; LP
Mus musculus	RefSeq	ILMN_209464	ILMN_209464	0610038F07RIK	NM_025333.3	NM_025333.3		66072	53828928	NM_025333.3	0610038F07Rik	NP_079609.2	ILMN_2596016	003990307	S	1672	CGCTCCCACAGACAAATAGCATTGGGCCTACTTAAGGACAAGAGATTGCC	19	-	10576377-10576426	19qA	Mus musculus RIKEN cDNA 0610038F07 gene (0610038F07Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA407634; AW049997; MGC61338	AA407634; AW049997; MGC61338
Mus musculus	RefSeq	ILMN_199955	ILMN_199955	LOC386423	XM_359224.1	XM_359224.1			38079190	XM_359224.1	LOC386423		ILMN_1244339	007160475	S	374	CTAGTTTGGAGCCGGGTGGGGTCCGAACAGGCCTTGGCAGTGACAACTTA										
Mus musculus	RefSeq	ILMN_201147	ILMN_201147	MAF	XM_356108.1	XM_356108.1			38089464	XM_356108.1	Maf		ILMN_1237448	004250450	S	1702	GTCAGTCTGTCCGCAGCCTTCCTGGGTCACACACTCTAGCTTTTAGCCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of chondrocyte differentiation [goid 32330] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_189583	ILMN_189583	USP25	NM_013918.2	NM_013918.2		30940	31980711	NM_013918.2	Usp25	NP_038946.2	ILMN_1226508	005550037	S	3818	GTCAGATTTCACTAAAGTGAGCGACTGGGTTTTAAGTCAAACTGCACTGA	16	+	77116430-77116479	16qC3.1	Mus musculus ubiquitin specific peptidase 25 (Usp25), mRNA.	A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence ISS]		
Mus musculus	RefSeq	ILMN_216092	ILMN_216092	MGAT1	NM_010794.2	NM_010794.2		17308	31981619	NM_010794.2	Mgat1	NP_034924.2	ILMN_3058137	007320204	I	366	AGGGTGCACGTGGCCATGGACTTTGGACCTGGATAAGTGGAGAGAAGCTG	11	+	49058966-49059015	11qB1.2	Mus musculus mannoside acetylglucosaminyltransferase 1 (Mgat1), mRNA. XM_921556 XM_921561	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 [goid 3827] [evidence IEA]	Mgat-1	Mgat-1
Mus musculus	RefSeq	ILMN_216092	ILMN_216092	MGAT1	NM_010794.2	NM_010794.2		17308	31981619	NM_010794.2	Mgat1	NP_034924.2	ILMN_2667234	002030070	S	2652	TCCGCATTCTTTAGGAGGATTCAGGGGCGGCCTAGTGGAAGACAGTGGGC	11	+	49076205-49076254	11qB1.2	Mus musculus mannoside acetylglucosaminyltransferase 1 (Mgat1), mRNA. XM_921556 XM_921561	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 [goid 3827] [evidence IEA]	Mgat-1	Mgat-1
Mus musculus	RefSeq	ILMN_211690	ILMN_211690	GNB2	NM_010312.4	NM_010312.4		14693	141803173	NM_010312.4	Gnb2	NP_034442.1	ILMN_1221732	001170390	S	1306	CTGGGCTACAGGGCCTCCGGTCCTGCTCCCATACCCAGGTTTGGTTCCTC	5	-	137970932-137970981	5qG2	Mus musculus guanine nucleotide binding protein (G protein), beta 2 (Gnb2), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gnb-2	Gnb-2
Mus musculus	MEEBO	ILMN_191277	ILMN_191277	2310040B03RIK	scl8602.1.1_28						2310040B03Rik		ILMN_2477729	005820196	S	11	TTTCTAGCCCAGGTGCAAGAGTTCACTGCCTTTCTGAGCGGGGCTGAGCG										
Mus musculus	RefSeq	ILMN_213693	ILMN_310321	LOC632022	XR_030945.1	XR_030945.1		632022	149251505	XR_030945.1	LOC632022		ILMN_2639750	007560369	S	434	CTGTGGGTGTATCCAAGAAGAAATGAGTCTCTGGGCCTTTGCTGTTAATA					PREDICTED: Mus musculus similar to 40S ribosomal protein S18 (LOC632022), misc RNA.					
Mus musculus	RefSeq	ILMN_211249	ILMN_211249	CYP1A1	NM_009992.3	NM_009992.3		13076	141801730	NM_009992.3	Cyp1a1	NP_034122.1	ILMN_2613985	007380437	S	2523	AAAATGTTTGTGCATAAGAGCTTTGTATTATGGACTGTATTTTGCTTATG	9	+	57551454-57551503	9qB	Mus musculus cytochrome P450, family 1, subfamily a, polypeptide 1 (Cyp1a1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 50665] [evidence IMP]; The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern [goid 18894] [evidence IMP]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [evidence IMP]; The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings) [goid 46483] [evidence IMP]; The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 9404] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IDA]	CP11; P450-1; AHRR; AHH	CP11; P450-1; AHRR; AHH
Mus musculus	RefSeq	ILMN_196891	ILMN_247776	LOC637149	XM_912753.3	XM_912753.3		637149	149263076	XM_912753.3	LOC637149	XP_917846.3	ILMN_1227955	001660491	S	401	AGACCATCTTGGTGTACCGCAACGGGGACCAGTTCTATGTGGGCCGCAAG					PREDICTED: Mus musculus similar to doublecortin domain containing 2 (LOC637149), mRNA.					
Mus musculus	RefSeq	ILMN_214723	ILMN_214723	POLL	NM_020032.2	NM_020032.2		56626	118130528	NM_020032.2	Poll	NP_064416.1	ILMN_2651209	004260358	S	914	TGCAAAGGCCATCAATGCTCTCAAGAGCTTCCACAAGCCTGTCAGCTCCT	19	-	45632209-45632258	19qC3	Mus musculus polymerase (DNA directed), lambda (Poll), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template [goid 6287] [evidence ISA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISS]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IDA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence ISA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	1110003P06Rik; AV007317	1110003P06Rik; AV007317
Mus musculus	RefSeq	ILMN_214723	ILMN_214723	POLL	NM_020032.2	NM_020032.2		56626	118130528	NM_020032.2	Poll	NP_064416.1	ILMN_2696994	006660369	S	2190	CGTGAGCCTTCACAGTAGAGAAAGCCATGTGGATTCTCTCACCCGCTCAC	19	-	45627511-45627560	19qC3	Mus musculus polymerase (DNA directed), lambda (Poll), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template [goid 6287] [evidence ISA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISS]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IDA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence ISA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	1110003P06Rik; AV007317	1110003P06Rik; AV007317
Mus musculus	RefSeq	ILMN_217718	ILMN_217718	RGS12	NM_173402.1	NM_173402.1		71729	27777688	NM_173402.1	Rgs12	NP_775578.1	ILMN_1217485	003890253	S	5341	CTTCTTCACTTGAGGGTGGGTTTTCTCTTTAGGATTGAAGTACAGGCATG	5	+	35376119-35376168	5qB2	Mus musculus regulator of G-protein signaling 12 (Rgs12), mRNA.				1200016K18Rik; AI481290; E130309H11; 4632412M04Rik	1200016K18Rik; AI481290; E130309H11; 4632412M04Rik
Mus musculus	RefSeq	ILMN_217718	ILMN_217718	RGS12	NM_173402.1	NM_173402.1		71729	27777688	NM_173402.1	Rgs12	NP_775578.1	ILMN_2686745	005130487	S	5001	ATTGTTCCTGTCTGACGCCTTGGCTGTGATGCAGCAGGCAATGTGGCCGC	5	+	35375779-35375828	5qB2	Mus musculus regulator of G-protein signaling 12 (Rgs12), mRNA.				1200016K18Rik; AI481290; E130309H11; 4632412M04Rik	1200016K18Rik; AI481290; E130309H11; 4632412M04Rik
Mus musculus	RefSeq	ILMN_184873	ILMN_184873	V1RF5	NM_134202.1	NM_134202.1		171236	21717726	NM_134202.1	V1rf5	NP_598963.1	ILMN_2422291	004210746	S	787	TTAGCAACTCTCATGCATAATCCCAGCTGGTCTCTGGCAAATGTAGCTGC	17	-	21130814-21130863	17qA3.2	Mus musculus vomeronasal 1 receptor, F5 (V1rf5), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_241299	ILMN_241299	PEG10	NM_001040611.1	NM_001040611.1		170676	98985811	NM_001040611.1	Peg10	NP_001035701.1	ILMN_3037645	003060470	I	6107	GGCCGAGCTCAGAGGGAACTACAGGGAAATCAGTGTTAGGAGTGAATTGG	6	+	4709957-4710006	6qA1	Mus musculus paternally expressed 10 (Peg10), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites [goid 32196] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Mart2; MEF3L; Mar2; HB-1; Edr; MyEF-3; AA407948	Mart2; MEF3L; Mar2; HB-1; Edr; MyEF-3; AA407948
Mus musculus	RefSeq	ILMN_200288	ILMN_200288	LOC386139	XM_359089.1	XM_359089.1			38081224	XM_359089.1	LOC386139		ILMN_1252541	007000091	S	706	GGGGAACTTGCCGAGTCGGTCCGTAAATGTGGAATCAGTGCTGGTTTTGC										
Mus musculus	RefSeq	ILMN_214302	ILMN_214302	ST8SIA6	NM_145838.1	NM_145838.1		241230	22003887	NM_145838.1	St8sia6	NP_665837.1	ILMN_2646606	005390327	S	3099	AATTAGCTTTAAATTATCTCCTAGCAACATTGGTCACGTTTCAATCATGC	2	-	13576573-13576622	2qA1	Mus musculus ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 (St8sia6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IDA]; The chemical reactions and pathways resulting in the formation of glycolipid, a compound containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid [goid 9247] [evidence IDA]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IDA]	1700007J08Rik; ST8SiaVI; AI314453; Siat8f; AI875066	1700007J08Rik; ST8SiaVI; AI314453; Siat8f; AI875066
Mus musculus	RefSeq	ILMN_247896	ILMN_247896	GM1965	NM_001033491.2	NM_001033491.2		434065	141801784	NM_001033491.2	Gm1965	NP_001028663.1	ILMN_3160463	004640519	S	873	CTGGTGGGATGTTCAGAGCTGTATCCTTTGAGCCAGCAGCCAGCCTCTAC	6	+	89095829-89095878	6qD1	Mus musculus gene model 1965, (NCBI) (Gm1965), mRNA.					
Mus musculus	RefSeq	ILMN_214831	ILMN_214831	SPRR3	NM_011478.1	NM_011478.1		20766	6755647	NM_011478.1	Sprr3	NP_035608.1	ILMN_1248103	002320348	S	589	CAGGGCTACACCAAGATACCTGACCAGGGATCCTCTAAGGTACCAGAGCC	3	-	92260819-92260868	3qF1	Mus musculus small proline-rich protein 3 (Sprr3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SPR3	SPR3
Mus musculus	RefSeq	ILMN_213276	ILMN_213276	PHF12	NM_174852.2	NM_174852.2		268448	30842821	NM_174852.2	Phf12	NP_777277.1	ILMN_2686926	004200471	S	3788	GTGGTAGAGTGTTTCTCAAATTGTCTATTGTAGCAAAGGCGTTTTTGTCG	11	+	77843830-77843879	11qB5	Mus musculus PHD finger protein 12 (Phf12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1523; 2410142K10Rik; F630045O13; PF1	mKIAA1523; 2410142K10Rik; F630045O13; PF1
Mus musculus	RefSeq	ILMN_213276	ILMN_213276	PHF12	NM_174852.2	NM_174852.2		268448	30842821	NM_174852.2	Phf12	NP_777277.1	ILMN_2635516	002970184	S	2223	CGCTTTAACCGTACCCTCTTTCCCAGCCAACTCTACTGCCATGGTGGACC	11	+	77838500-77838549	11qB5	Mus musculus PHD finger protein 12 (Phf12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1523; 2410142K10Rik; F630045O13; PF1	mKIAA1523; 2410142K10Rik; F630045O13; PF1
Mus musculus	RefSeq	ILMN_257811	ILMN_257811	ZFP142	NM_029888.1	NM_029888.1		77264	110626082	NM_029888.1	Zfp142	NP_084164.1	ILMN_2858462	000770739	S	6500	TCCATTCCCTTCTTACGCAGCACAAAGAGGAGAGCCCTTGGAAACGTCGT				1qC3	Mus musculus zinc finger protein 142 (Zfp142), mRNA.				mKIAA0236; 9330177B18Rik; BB154236	mKIAA0236; 9330177B18Rik; BB154236
Mus musculus	RefSeq	ILMN_200424	ILMN_200424	LOC383215	XM_356927.1	XM_356927.1			38081825	XM_356927.1	LOC383215		ILMN_1213361	001500278	S	53	CTGGTGCTGACTTAGGGCTGGAACATTCTGTGGTTGTTATCGGAATGGAA										
Mus musculus	MEEBO	ILMN_184441	ILMN_184441	0610025J13RIK	scl25258.6.1_0				51709792	XM_355548	0610025J13Rik		ILMN_2418656	001980110	S	16	CGCCACCTACCGGCGACCAGGCAAGCGTCAGTGCGACCCCAAAGCAAGCT										
Mus musculus	MEEBO	ILMN_184441	ILMN_184441	0610025J13RIK	scl25258.6.1_0				51709792	XM_355548	0610025J13Rik		ILMN_1236032	004890184	S	19	CACCTACCGGCGACCAGGCAAGCGTCAGTGCGACCCCAAAGCAAGCTGCT										
Mus musculus	RefSeq	ILMN_221179	ILMN_221179	FMO3	NM_008030.1	NM_008030.1		14262	6679814	NM_008030.1	Fmo3	NP_032056.1	ILMN_2943135	006020441	S	1799	CTGGCTTTGTAACTAAGCCCCTTTCAGAATCATGTTGATCTGCAGTGGGC	1	-	164884092-164884141	1qH2.1	Mus musculus flavin containing monooxygenase 3 (Fmo3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AW111792	AW111792
Mus musculus	RefSeq	ILMN_221179	ILMN_221179	FMO3	NM_008030.1	NM_008030.1		14262	6679814	NM_008030.1	Fmo3	NP_032056.1	ILMN_2731963	001820286	S	1503	GTGGGACCGATCACTGAAGCCTATGAAGACGCGTGTCGTCAGTAAAGTTC	1	-	164884388-164884437	1qH2.1	Mus musculus flavin containing monooxygenase 3 (Fmo3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AW111792	AW111792
Mus musculus	RefSeq	ILMN_212971	ILMN_212971	CDCA2	NM_175384.3	NM_175384.3		108912	32129251	NM_175384.3	Cdca2	NP_780593.2	ILMN_2632153	001820274	S	2536	GCTCTTAGGGAAGAGGACCCAGCTTCCTGTAGGCCGCTTCAGTGCATTGC	14	-	68294812-68294861	14qD1	Mus musculus cell division cycle associated 2 (Cdca2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2610311M19Rik; AI586158	2610311M19Rik; AI586158
Mus musculus	RefSeq	ILMN_214053	ILMN_214053	OLFR1518	NM_146545.2	NM_146545.2		258538	125858742	NM_146545.2	Olfr1518	NP_666756.2	ILMN_2643751	006510168	S	569	CGAGGCTTTTAGAGGCATTTGGCCTTTATTGTGCCTCCATTACTCTGCTG	10	+	128688160-128688209	10qD3	Mus musculus olfactory receptor 1518 (Olfr1518), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR111-6; MOR111-7; Olfr775	MOR111-6; MOR111-7; Olfr775
Mus musculus	RefSeq	ILMN_220528	ILMN_214053	OLFR1518	NM_146545.2	NM_146545.2		258538	125858742	NM_146545.2	Olfr1518	NP_666756.2	ILMN_2723259	006280598	S	806	CCAAAGGGGTGGCTGTTCTCAATACTTCAATTGCTCCCATGCTGAACCCT	10	+	128688397-128688446	10qD3	Mus musculus olfactory receptor 1518 (Olfr1518), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR111-6; MOR111-7; Olfr775	MOR111-6; MOR111-7; Olfr775
Mus musculus	RefSeq	ILMN_214870	ILMN_214870	PKP3	NM_019762.1	NM_019762.1		56460	9790162	NM_019762.1	Pkp3	NP_062736.1	ILMN_2652890	005260731	S	2745	ATTAGTCACAATGGCAAGGGCGGGGCCACCCTCGGCCTGACAGCTTTGTG	7	+	148276324-148276373	7qF5	Mus musculus plakophilin 3 (Pkp3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]; A small junction assembled during the cellularization stage of insect embyrogenesis; spot adherens junctions later fuse to form the zonula adherens [goid 5914] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2310056L12Rik	2310056L12Rik
Mus musculus	RefSeq	ILMN_213539	ILMN_213539	FASN	NM_007988.3	NM_007988.3		14104	93102408	NM_007988.3	Fasn	NP_032014.3	ILMN_2874104	002340048	S	9251	GCAGAGGAGTGGAGGTTGCTTGGAAGAGGAGGATCAAGAGAAAAGTAGGC	11	-	120667909-120667958	11qE2	Mus musculus fatty acid synthase (Fasn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Cytoplasmic bead-like structures of animal cells, visible by electron microscope. Each granule is a functional unit with the biosynthesis and catabolism of glycogen being catalyzed by enzymes bound to the granule surface [goid 42587] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Enables the directed movement of acyl groups into, out of, within or between cells [goid 36] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl-[acyl-carrier protein] + NADPH + H+ [goid 4316] [evidence IEA]; Catalysis of the reaction: acyl-[acyl-carrier protein] + NADP+ = trans-2,3-dehydroacyl-[acyl-carrier protein] + NADPH + H+ [goid 4319] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + [acyl-carrier protein] = CoA + acetyl-[acyl-carrier protein] [goid 4313] [evidence IEA]; Catalysis of the reaction: malonyl-CoA + [acyl-carrier protein] = CoA + malonyl-[acyl-carrier protein] [goid 4314] [evidence IEA]; Catalysis of the reaction: acyl-[acyl-carrier protein] + malonyl-[acyl-carrier protein] = 3-oxoacyl-[acyl-carrier protein] + CO2 + [acyl-carrier protein] [goid 4315] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + n malonyl-CoA + 2n NADPH + 2n H+ = long-chain fatty acid + n+1 CoA + n CO2 + 2n NADP+ [goid 4312] [evidence IEA]; Catalysis of the reaction: oleoyl-[acyl-carrier protein] + H2O = [acyl-carrier protein] + oleate [goid 4320] [evidence IEA]; Catalysis of the reaction: (3R)-3-hydroxypalmitoyl-[acyl-carrier protein] = 2-hexadecenoyl-[acyl-carrier protein] + H2O [goid 4317] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]	A630082H08Rik; FAS	A630082H08Rik; FAS
Mus musculus	RefSeq	ILMN_222439	ILMN_222439	ALG11	NM_183142.1	NM_183142.1		207958	34147156	NM_183142.1	Alg11	NP_898965.1	ILMN_2827701	000580070	S	1407	AGCTATAGGTCATGGGAGAACCCGTGCTTCGTGTGTGGGAGTCCCGAGCT	8	+	23533744-23533793	8qA2	Mus musculus asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase) (Alg11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI849156; AW492253; B230397C21	AI849156; AW492253; B230397C21
Mus musculus	RefSeq	ILMN_223606	ILMN_223606	PLAC8	NM_139198.1	NM_139198.1		231507	21105852	NM_139198.1	Plac8	NP_631937.1	ILMN_2988143	005860243	S	402	ACAGGAGGAGAGCCATGAACGCTTTCTAAGGAGCTGGATGGCAAGAGCTC	5	-	100794279-100794290:100796782-100796792:100796793-100796819	5qE4	Mus musculus placenta-specific 8 (Plac8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D5Wsu111e; C15	D5Wsu111e; C15
Mus musculus	RefSeq	ILMN_211985	ILMN_228077	CLEC7A	XM_984804.1	XM_984804.1		56644	94379154	XM_984804.1	Clec7a	XP_989898.1	ILMN_2770652	002360463	S	209	GGTGACACAATTCAGGGAGAAATCCAGAGGAGAAAGACAACTTCCTATCA				6qF3	PREDICTED: Mus musculus C-type lectin domain family 7, member a (Clec7a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species [goid 1878] [evidence IDA]; The series of events in which a stimulus from a yeast is received and converted into a molecular signal [goid 1879] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IDA]; Any series of molecular signals generated as a consequence of binding to a cell surface pattern recognition receptor (PRR). Such receptors bind for molecular patterns based on a repeating or polymeric structures, like those of polysaccharides or peptidoglycans, which are sometimes associated with potential pathogens [goid 2752] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octomer oligosaccharide [goid 2238] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence IDA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IDA]	Interacting selectively with an opsonin, such as a complement component or antibody, deposited on the surface of a bacteria, virus, immune complex, or other particulate material [goid 1846] [evidence IDA]; Interacting selectively with zymosan [goid 1872] [evidence IDA]; Combining with zymosan to initiate a change in cell activity [goid 1874] [evidence IDA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any polysaccharide [goid 30247] [evidence IDA]		
Mus musculus	RefSeq	ILMN_216045	ILMN_216045	OLFR490	NM_146498.1	NM_146498.1		258491	33239121	NM_146498.1	Olfr490	NP_666709.1	ILMN_2666679	001740255	S	770	CAGTTACATTCATCTATGTGATGCCTAAGTCCAGCTATTCAATGGACCAG	7	-	115429819-115429868	7qE3	Mus musculus olfactory receptor 490 (Olfr490), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-17	MOR204-17
Mus musculus	RefSeq	ILMN_220973	ILMN_226143	OLFR655	NM_146820.1	NM_146820.1		258817	22129220	NM_146820.1	Olfr655	NP_667031.1	ILMN_2729333	002490408	S	688	CGAGATGCCACCTTCAAAGCCCTCAATACATGCTCAGCCCACCTCTTTGT	7	-	111744956-111745005	7qE3	Mus musculus olfactory receptor 655 (Olfr655), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR38-1	MOR38-1
Mus musculus	MEEBO	ILMN_217486	ILMN_217486	5730591J02RIK	scl077581.1_154	NM_175262.2			31340755	NM_175262.2	5730591J02Rik		ILMN_1255124	002120523	S	3031	CCTCTGTGTCAAGAAGAGCTGAGTCATTACTAGGTGGTTACATTTTAGCA										
Mus musculus	RefSeq	ILMN_199945	ILMN_199945	LOC384094	XM_357416.1	XM_357416.1			38079116	XM_357416.1	LOC384094		ILMN_2537046	000160021	S	146	AGAAGCTGGGCCCTGGGGAGAGGCTGGGCCGTGAGGAGAAGCTAAGCCAT										
Mus musculus	MEEBO	ILMN_185646	ILMN_185646	5031439G07RIK	scl46882.12_63				51829847	XM_128281	5031439G07Rik		ILMN_2428798	000070431	S	18	TCTCTCTTCTATGTGGATGGCTCTTTCATTTTGGACTCTGACTTTAATAA										
Mus musculus	Riken	ILMN_204361	ILMN_204361	PTPRM	ri|C430003P11|PX00078K18|AK049403|1869					AK049403	Ptprm		ILMN_1222272	000430576	S	1649	AGCGATCACTGAGTCATACTCTTTCCTAGCTACCTAGTGCTTTTTTCCCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_205665	ILMN_258224	LOC676709	XM_992337.1	XM_992337.1		676709	94390719	XM_992337.1	LOC676709	XP_997431.1	ILMN_1251564	003180437	S	551	ATGACACAGAGCAGCACAGGGGTTGGGGGCAGGGGCACATACATCATCCT					PREDICTED: Mus musculus hypothetical protein LOC676709 (LOC676709), mRNA.					
Mus musculus	RefSeq	ILMN_219555	ILMN_219555	OTUD6B	NM_152812.2	NM_152812.2		72201	56711337	NM_152812.2	Otud6b	NP_690025.1	ILMN_1253150	004760072	S	2407	CCTGCTATACAGTGTATTCTGAAGGGTGTATTCTGCTTTGTAACTTTTGA	4	-	14737251-14737300	4qA1	Mus musculus OTU domain containing 6B (Otud6b), mRNA.				AU015433; 2600013N14Rik; MGC103361	AU015433; 2600013N14Rik; MGC103361
Mus musculus	MEEBO	ILMN_195376	ILMN_195376	4833409N03RIK	scl52609.1.148_40						4833409N03Rik		ILMN_1238174	002490168	S	1	GGGGCCAGTTTGACGGTAGGGGCACATGTGGTGCTTATTGTCGTAAATCT										
Mus musculus	RefSeq	ILMN_218558	ILMN_218558	ABPZ	NM_177446.2	NM_177446.2		233090	31342756	NM_177446.2	Abpz	NP_803229.1	ILMN_1232401	002710427	S	255	CCTCTATACTTGTCACCCCAGAATGCCTGCAGTACTATTCCGAAGAAACC	7	-	34522410-34522459	7qB1	Mus musculus androgen binding protein zeta (Abpz), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C2b; Scgb2b3	C2b; Scgb2b3
Mus musculus	RefSeq	ILMN_215375	ILMN_215375	FOXI1	NM_023907.3	NM_023907.3		14233	141802758	NM_023907.3	Foxi1	NP_076396.2	ILMN_2658723	005670661	S	711	TTCATCCTCCAGCACCAGCTCATTGGCTTCAGAGAAAACGGAGAACGGTC	11	-	34105934-34105983	11qA4	Mus musculus forkhead box I1 (Foxi1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	HFH-3; 5830401E05Rik; Hfh3; Fkh10; FREAC6	HFH-3; 5830401E05Rik; Hfh3; Fkh10; FREAC6
Mus musculus	MEEBO	ILMN_213975	ILMN_213975	G0B-ALPHA	scl000704.1_118				951087	M36778	G0B-alpha		ILMN_2642907	007560209	S	1035	CCGTGACAGATGTCATCATCGCCAAAAACCTACGGGGCTGTGGACTCTAC										
Mus musculus	MEEBO	ILMN_213975	ILMN_213975	G0B-ALPHA	scl000704.1_118				951087	M36778	G0B-alpha		ILMN_2680496	004230386	S	833	AAGAAGGACATATTTGAGGAGAAGATCAAGAAGTCCCCACTCACCATCTG										
Mus musculus	MEEBO	ILMN_187785	ILMN_187785	SLC30A9	scl27746.21_228				31340929	NM_178651	Slc30a9		ILMN_1256917	004280524	S	16	GTTGCCCCTGAATCCCTCATCCTGCCTCTGAGATGGAACTTGGGAAAGCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209944	ILMN_209944	RAC2	NM_009008.3	NM_009008.3		19354	86355518	NM_009008.3	Rac2	NP_033034.1	ILMN_2600678	004490243	S	831	TAGCTGCAGAACTTGCCTCTCTCCTCCACGGAGGTCCCTGGGGATGGGCG	15	-	78391754-78391803	15qE1	Mus musculus RAS-related C3 botulinum substrate 2 (Rac2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]	AI323801; AI452260	AI323801; AI452260
Mus musculus	RefSeq	ILMN_215958	ILMN_215958	PSTPIP1	NM_011193.1	NM_011193.1		19200	33469104	NM_011193.1	Pstpip1	NP_035323.1	ILMN_2665666	002360554	S	1484	CTCTGAGGAAAGGCTAGCAGTCTCCACATACCTCCGCCCTGACTGTGAGG	9	+	55976518-55976527:55976528-55976567	9qB	Mus musculus proline-serine-threonine phosphatase-interacting protein 1 (Pstpip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells. In animal cells, the contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis [goid 5826] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IC ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with any protein phosphatase [goid 19903] [evidence IDA]	def-2	def-2
Mus musculus	RefSeq	ILMN_216315	ILMN_216315	MPST	NM_138670.2	NM_138670.2		246221	65301474	NM_138670.2	Mpst	NP_619611.2	ILMN_2669690	007150187	S	739	ACGCCCGCGCAGCTGGCCGTTTCCAAGGCACCCAGCCAGAACCCCGAGAT	15	+	78241044-78241093	15qE1	Mus musculus mercaptopyruvate sulfurtransferase (Mpst), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [evidence IEA]; Catalysis of the reaction: 3-mercaptopyruvate + cyanide = pyruvate + thiocyanate [goid 16784] [evidence IEA]	Mst	Mst
Mus musculus	Riken	ILMN_203110	ILMN_203110	LYAR	ri|4930422D10|PX00030C10|AK076727|746					AK076727	Lyar		ILMN_1214143	003520301	S	102	GAGTTCCTGGAGATATTGCATCCCAGTTTTTAGTCCGGCACTCGGGGCCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190898	ILMN_190898	SLA2	scl18431.7_463						Sla2		ILMN_2474239	003310754	S	16	GCATAGCAGACACTTTACACTTCAGATTACAGCCGTGGGAGCCGCTGCTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence ISS]		
Mus musculus	RefSeq	ILMN_217515	ILMN_257269	PREPL	NM_145984.2	NM_145984.2		213760	31981860	NM_145984.2	Prepl	NP_666096.2	ILMN_2684173	001450338	S	2893	TTGACACCCGTGCCATTTCTCTGGAGAAGGGAGAGGGCCTGGTCTTGGAG	17	-	85463209-85463258	17qE4	Mus musculus prolyl endopeptidase-like (Prepl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	mKIAA0436; D030028O16Rik; 2810457N15Rik; MGC7980; 9530014L06Rik	mKIAA0436; D030028O16Rik; 2810457N15Rik; MGC7980; 9530014L06Rik
Mus musculus	RefSeq	ILMN_221894	ILMN_221894	P2RX5	NM_033321.2	NM_033321.2		94045	142349156	NM_033321.2	P2rx5	NP_201578.1	ILMN_2741716	000070333	S	381	TGGTCACCAACCTGATCGTGACTCCTAACCAGCGGCAGGGCATCTGTGCT	11	+	72979062-72979111	11qB4	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 5 (P2rx5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IDA]	P2X5	P2X5
Mus musculus	RefSeq	ILMN_196032	ILMN_228350	LGR6	NM_001033409.3	NM_001033409.3		329252	146198754	NM_001033409.3	Lgr6	NP_001028581.1	ILMN_2609505	000010719	S	3178	CCAAGTCTTGCTTTGTCTTGGCCTTCAGCTTCACTTTCACCCTGGGCCTT				1qE4	Mus musculus leucine-rich repeat-containing G protein-coupled receptor 6 (Lgr6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A530037C04Rik; D830026M09	A530037C04Rik; D830026M09
Mus musculus	Riken	ILMN_202383	ILMN_202383	4930535E21RIK	ri|4930535E21|PX00034L23|AK015980|895					AK015980	4930535E21Rik		ILMN_2549193	001850301	S	769	GCTGGAGGCCAGCTGAACACCTCCCTGGGCTCCGATAAAAGCATTTAAAA										
Mus musculus	RefSeq	ILMN_209568	ILMN_209568	RHCG	NM_019799.2	NM_019799.2		56315	141803521	NM_019799.2	Rhcg	NP_062773.1	ILMN_2597034	006520609	S	1757	TTCATCCCAGGGGGCTCACCGGGCTGAGAATGGAGGAGATTCGGACAAAG	7	-	86738523-86738572	7qD3	Mus musculus Rhesus blood group-associated C glycoprotein (Rhcg), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of ammonium into, out of, within or between cells. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals [goid 15696] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		BB065800	BB065800
Mus musculus	MEEBO	ILMN_223561	ILMN_223561	A430072C10RIK	scl21506.1.1_165	NM_176967.2			31342490	NM_176967.2	A430072C10Rik		ILMN_2765805	004180041	S	2114	CAGCCCCACCCCATGTCTGATCAGCTTCTTCCTGCTGCTGGACCAGAAAT										
Mus musculus	RefSeq	ILMN_222081	ILMN_222081	CD47	NM_010581.3	NM_010581.3		16423	31982429	NM_010581.3	Cd47	NP_034711.1	ILMN_2744337	004060767	S	1621	TGGTTGGGCAAATCCCGTGTGGCCCCTCTGTGTGCTATGATATTGATGGC	16	+	49911503-49911552	16qB5	Mus musculus CD47 antigen (Rh-related antigen, integrin-associated signal transducer) (Cd47), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process by which a microorganism (or other particulate material) is rendered more susceptible to phagocytosis by coating with an opsonin, a blood serum protein such as a complement component or antibody [goid 8228] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW108519; Itgp; IAP; AA407862; AI848868; 9130415E20Rik; B430305P08Rik	AW108519; Itgp; IAP; AA407862; AI848868; 9130415E20Rik; B430305P08Rik
Mus musculus	MEEBO	ILMN_187623	ILMN_187623	ARMC1	scl12797.1.1_330				31542136	NM_028840	Armc1		ILMN_2445713	004780594	S	7	CCAAGACAGGGATTAGTGGTAAGAGAACATTGAGCCTAAATTAAAAACAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_187623	ILMN_187623	ARMC1	scl12797.1.1_330				31542136	NM_028840	Armc1		ILMN_2489728	001780072	S	2	GTTTTCCAGAGCCTCCTGTAGAAGCTTGTGTTCCAATCTCAGATCTACCC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_198454	ILMN_198454	LOC269096	XM_196204.1	XM_196204.1			25055405	XM_196204.1	LOC269096		ILMN_1259692	004480215	S	592	CTGGGTCTCCAGGGCTAGTTCTGTTTCCCATGCAGCTTTAGCCTGTGAAG										
Mus musculus	Riken	ILMN_202097	ILMN_202097	2810026O10RIK	ri|2810026O10|ZX00064J12|AK012823|1207					AK012823	2810026O10Rik		ILMN_1243375	004890050	S	335	TGCGGTGGCATGTTTTGCCGATGTCGGATTGGTAGCCACTGAAGAAGGAG										
Mus musculus	RefSeq	ILMN_193799	ILMN_249107	LIN7A	NM_001039354.1	NM_001039354.1		108030	86991441	NM_001039354.1	Lin7a	NP_001034443.1	ILMN_2500540	007330411	S	5827	GCAGTGGTTCAACCTGACCAAAGTGGTATTACGCTGCTGGGAAGTAAATG	10	+	106862139-106862188	10qD1	Mus musculus lin-7 homolog A (C. elegans) (Lin7a), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	AI848705; MGC102231; LIN-7A; Veli; Veli1; TIP-33; MALS-1	AI848705; MGC102231; LIN-7A; Veli; Veli1; TIP-33; MALS-1
Mus musculus	RefSeq	ILMN_193799	ILMN_249107	LIN7A	NM_001039354.1	NM_001039354.1		108030	86991441	NM_001039354.1	Lin7a	NP_001034443.1	ILMN_2614313	000150356	S	1899	GGTACTGGCCCTCTTCCGTTGAGGTATGTAGTACCCACTGATACCAGTAT	10	+	106858211-106858260	10qD1	Mus musculus lin-7 homolog A (C. elegans) (Lin7a), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	AI848705; MGC102231; LIN-7A; Veli; Veli1; TIP-33; MALS-1	AI848705; MGC102231; LIN-7A; Veli; Veli1; TIP-33; MALS-1
Mus musculus	RefSeq	ILMN_193799	ILMN_249107	LIN7A	NM_001039354.1	NM_001039354.1		108030	86991441	NM_001039354.1	Lin7a	NP_001034443.1	ILMN_2613255	001260367	S	166	CCAGTGCACAAGCTCCAGTCTCTCAAAAAGGTGCTTCAGAGTGAGTTTTG	10	+	106761020-106761069	10qD1	Mus musculus lin-7 homolog A (C. elegans) (Lin7a), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	AI848705; MGC102231; LIN-7A; Veli; Veli1; TIP-33; MALS-1	AI848705; MGC102231; LIN-7A; Veli; Veli1; TIP-33; MALS-1
Mus musculus	RefSeq	ILMN_185220	ILMN_225250	RAB22A	NM_024436.3	NM_024436.3		19334	148747176	NM_024436.3	Rab22a	NP_077756.2	ILMN_1214708	007330730	S	390	GACCAAGACTGTCCAGTACCAAAATGAGCTACATAAATTCCTAATCTGGG				2qH4	Mus musculus RAB22A, member RAS oncogene family (Rab22a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Rab22; AW319644; 3732413A17Rik; E130120E14Rik; AW550514; AI662177	Rab22; AW319644; 3732413A17Rik; E130120E14Rik; AW550514; AI662177
Mus musculus	RefSeq	ILMN_223126	ILMN_246420	SCAF1	NM_001008422.1	NM_001008422.1		233208	56605681	NM_001008422.1	Scaf1	NP_001008422.1	ILMN_2759669	000360356	S	3790	TCAAGGTGAGCAATCTGGTGAGGGCCTACGTCCAGCGCTACCGCTACTTC	7	-	52258657-52258706	7qB4	Mus musculus SR-related CTD-associated factor 1 (Scaf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence ISO]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence ISO]	SR-A1; MGC109685	SR-A1; MGC109685
Mus musculus	RefSeq	ILMN_191224	ILMN_224362	CITED2	NM_010828.2	NM_010828.2		17684	70887540	NM_010828.2	Cited2	NP_034958.2	ILMN_2683980	006020379	S	647	CAGGCCACCAGATGAACGGGACAAACCAGCACTTCCGAGATTGCAACCCC	10	+	17444176-17444225	10qA2	Mus musculus Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 (Cited2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IDA]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence TAS]	p35srj; ER154-like; Msg2; AI835299; Mrg1	p35srj; ER154-like; Msg2; AI835299; Mrg1
Mus musculus	RefSeq	ILMN_224362	ILMN_224362	CITED2	NM_010828.2	NM_010828.2		17684	70887540	NM_010828.2	Cited2	NP_034958.2	ILMN_2905866	007210139	S	490	GCCGCCAGGTTTAACAACTCCCAGTTCATGGGTCCCCCGGTGGCCAGCCA	10	+	17444019-17444068	10qA2	Mus musculus Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 (Cited2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IDA]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence TAS]	p35srj; ER154-like; Msg2; AI835299; Mrg1	p35srj; ER154-like; Msg2; AI835299; Mrg1
Mus musculus	RefSeq	ILMN_191224	ILMN_224362	CITED2	NM_010828.2	NM_010828.2		17684	70887540	NM_010828.2	Cited2	NP_034958.2	ILMN_2477221	005860538	S	1613	GTGGGCCAAACCGTTCTGGATCAGGAAAAGTCATACCGTTCACTTTCAAG	10	+	17445142-17445191	10qA2	Mus musculus Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 (Cited2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IDA]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence TAS]	p35srj; ER154-like; Msg2; AI835299; Mrg1	p35srj; ER154-like; Msg2; AI835299; Mrg1
Mus musculus	RefSeq	ILMN_201222	ILMN_201222	LOC384941	XM_357951.1	XM_357951.1			38089934	XM_357951.1	LOC384941		ILMN_1257458	003450386	S	445	TGGTCCCTGCTGAGGGGCGAGAGTACAGGGCCATTCTCTGAGCCTTGCTA										
Mus musculus	Riken	ILMN_202326	ILMN_202326	4930453L07RIK	ri|4930453L07|PX00031N11|AK015455|1440					AK015455	4930453L07Rik		ILMN_1256106	004610402	S	1276	GCCATGAAACTGCTTGGATGTGACCGTGTAACTCACAGAGGCAAACCCCC										
Mus musculus	RefSeq	ILMN_218871	ILMN_218871	PLSCR1	NM_011636.1	NM_011636.1		22038	6755872	NM_011636.1	Plscr1	NP_035766.1	ILMN_2911344	006130328	S	881	CTGGAAACGAGGAGCAAAGATCAGGAGCATGGCAGTAACTCCCTGAGAGT	9	+	92166402-92166426:92166427-92166451	9qE3.3	Mus musculus phospholipid scramblase 1 (Plscr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	MmTRA1a; MmTRA1b; Tras1; Tras2; NOR1; TRA1	MmTRA1a; MmTRA1b; Tras1; Tras2; NOR1; TRA1
Mus musculus	RefSeq	ILMN_218871	ILMN_218871	PLSCR1	NM_011636.1	NM_011636.1		22038	6755872	NM_011636.1	Plscr1	NP_035766.1	ILMN_2701271	001340148	S	421	GGGGCGTCTAGACCTTTCACCTTGAGGATCCTGGATAATCTGGGCCGAGA	9	+	92161349-92161398	9qE3.3	Mus musculus phospholipid scramblase 1 (Plscr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	MmTRA1a; MmTRA1b; Tras1; Tras2; NOR1; TRA1	MmTRA1a; MmTRA1b; Tras1; Tras2; NOR1; TRA1
Mus musculus	RefSeq	ILMN_217501	ILMN_217501	CPLX3	NM_146223.2	NM_146223.2		235415	31542187	NM_146223.2	Cplx3	NP_666335.1	ILMN_2683943	004010187	S	2127	GGTGTCCTCAAAGTTTGTGTTTAGGCAGTGTGTTTCAGTTTCTGCCGGGT	9	-	57448432-57448481	9qB	Mus musculus complexin 3 (Cplx3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IDA]	Enables the directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 5326] [evidence IMP]; Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IEA]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence IDA]	MGC38804; BC016632; ERGL; CpxIII; MGC21420; ERGIC-53L; Lman1l; Lamn1l	MGC38804; BC016632; ERGL; CpxIII; MGC21420; ERGIC-53L; Lman1l; Lamn1l
Mus musculus	MEEBO	ILMN_188529	ILMN_188529	SCL000650.1_5	scl000650.1_5	AK034498.1			26329984	AK034498.1	scl000650.1_5		ILMN_1234132	004810682	S	20	GCTGCAGCAGGAATTCTTACCTGTGCTTCAGCCCAGCATACAGACTGCTG										
Mus musculus	RefSeq	ILMN_221637	ILMN_221637	GPR107	NM_178760.3	NM_178760.3		277463	141802594	NM_178760.3	Gpr107	NP_848875.1	ILMN_1244835	002510717	S	3567	TGAGCCAGCATTCCGCGGTGTCCTTGGGTAGAGGAGTCTGATTGGAGTCC	2	+	31071746-31071795	2qB	Mus musculus G protein-coupled receptor 107 (Gpr107), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mKIAA1624; AI790205; C530034M11	mKIAA1624; AI790205; C530034M11
Mus musculus	Riken	ILMN_204235	ILMN_204235	A830061H17RIK	ri|A830061H17|PX00155L24|AK043971|2136					AK043971	A830061H17Rik		ILMN_1257932	000110598	S	1846	GAGCTCCTAACTCCGCCTCCCTGATGCTGGGATTACAGATGTGAGCCACC										
Mus musculus	RefSeq	ILMN_211553	ILMN_260861	APOL7A	NM_029419.1	NM_029419.1		75761	58037428	NM_029419.1	Apol7a	NP_083695.1	ILMN_1216521	003460102	S	2123	GGGGATGCTGGGAATACCACCTGTCCAATCATCACAAGTTCTTGGCCTTC	15	-	77218868-77218917	15qE1	Mus musculus apolipoprotein L 7a (Apol7a), mRNA.				9130022K13Rik	9130022K13Rik
Mus musculus	RefSeq	ILMN_215801	ILMN_215801	PCDH10	NM_011043.3	NM_011043.3		18526	148271082	NM_011043.3	Pcdh10	NP_035173.2	ILMN_2663752	006940646	S	3889	CTCTTTGCATCTGTCCCAGGCATTAATAAAGTTGCTTCCATTTTGGTTTG				3qB	Mus musculus protocadherin 10 (Pcdh10), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1400; 6430521D13Rik; 6430703F07Rik	mKIAA1400; 6430521D13Rik; 6430703F07Rik
Mus musculus	RefSeq	ILMN_215801	ILMN_215801	PCDH10	NM_011043.3	NM_011043.3		18526	148271082	NM_011043.3	Pcdh10	NP_035173.2	ILMN_1228833	002650162	S	4475	GAGGGCCTCTGGAGGGAAAATGGAGCAGTGTTATGACAGTCACTCTTGGC				3qB	Mus musculus protocadherin 10 (Pcdh10), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1400; 6430521D13Rik; 6430703F07Rik	mKIAA1400; 6430521D13Rik; 6430703F07Rik
Mus musculus	Riken	ILMN_205021	ILMN_205021	A430069M06RIK	ri|A430069M06|PX00138A21|AK040145|1665					AK040145	A430069M06Rik		ILMN_2569391	004610315	S	1589	CTCTCTTTGTAAAGGGCTTTGGGGCCTGAAAAAGCATGTCCATGGCTGCC										
Mus musculus	RefSeq	ILMN_218526	ILMN_218526	SREBF1	NM_011480.3	NM_011480.3		20787	146134488	NM_011480.3	Srebf1	NP_035610.1	ILMN_2696876	006550056	S	3724	TTTGCAAACTTTATTTTCATAGGTTGAGAAATTTTGTACAGAATATTAAA				11qB2	Mus musculus sterol regulatory element binding transcription factor 1 (Srebf1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment [goid 9267] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with the sterol response element (SRE), a nonpalindromic sequence found in the promoters of genes involved in lipid metabolism [goid 32810] [evidence ISS]	SREBP-1c; SREBP-1; D630008H06; SREBP-1a; ADD1; SREBP1; ADD-1	SREBP-1c; SREBP-1; D630008H06; SREBP-1a; ADD1; SREBP1; ADD-1
Mus musculus	RefSeq	ILMN_212235	ILMN_212235	RPS27L	NM_026467.2	NM_026467.2		67941	141803225	NM_026467.2	Rps27l	NP_080743.1	ILMN_2624280	002650253	S	196	TTCAGCCATGCACAGACTGTGGTTCTTTGTGTGGGTTGTTCAACTGTGTT	9	+	66795417-66795466	9qC	Mus musculus ribosomal protein S27-like (Rps27l), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	1810034D23Rik	1810034D23Rik
Mus musculus	RefSeq	ILMN_197768	ILMN_197768	EG212727	XM_143402.4	XM_143402.4		212727	51708306	XM_143402.4	EG212727	XP_143402.4	ILMN_1244684	006650292	S	454	ATGGGAGCCTTCTTTAAAACACCTGGACAGAGCATAACACCTGCAGTCCC	3	+	94070074-94070123	3qF2.1	PREDICTED: Mus musculus predicted gene, EG212727 (EG212727), mRNA.					
Mus musculus	RefSeq	ILMN_197219	ILMN_245855	LOC666709	XM_985551.1	XM_985551.1		666709	94366432	XM_985551.1	LOC666709	XP_990645.1	ILMN_1250679	002630327	S	519	GAGCAATGTTGCCCTGCTCGGGTATCAGTAGTTTTGGTTATCCACTCAAC	2	+	49173587-49173594:49177652-49177693	2qC1.1	PREDICTED: Mus musculus hypothetical LOC666709 (LOC666709), mRNA.					
Mus musculus	RefSeq	ILMN_220348	ILMN_220348	SIL1	NM_030749.1	NM_030749.1		81500	13540506	NM_030749.1	Sil1	NP_109674.1	ILMN_2720930	006450010	S	1363	GGGCGTCTCCAAGCAGAGTACCAAGCCCTGGCCTCCCTGGAGCTCCAAGA	18	-	35426277-35426326	18qB1-qB2	Mus musculus endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae) (Sil1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI042831; wz; 1810057E01Rik	AI042831; wz; 1810057E01Rik
Mus musculus	RefSeq	ILMN_217135	ILMN_217135	SPATA17	NM_028848.2	NM_028848.2		74717	141802146	NM_028848.2	Spata17	NP_083124.1	ILMN_1248007	004280088	S	676	CTCCTGGAACGAGAGGAGAAGCAAAAAGATTACCAAGCCCGCAAGATGCA	1	-	188964273-188964322	1qH5	Mus musculus spermatogenesis associated 17 (Spata17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	MSRG-11; MGC107213; 4930504I07Rik; 4930513F16Rik; 1700065F16Rik	MSRG-11; MGC107213; 4930504I07Rik; 4930513F16Rik; 1700065F16Rik
Mus musculus	RefSeq	ILMN_217135	ILMN_217135	SPATA17	NM_028848.2	NM_028848.2		74717	141802146	NM_028848.2	Spata17	NP_083124.1	ILMN_2679469	000110441	S	1258	CCTTCATTTCAACTCTTCTCGAAGTATGGAAAGTTATATTCGAAAGCTGG	1	-	188872300-188872349	1qH5	Mus musculus spermatogenesis associated 17 (Spata17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	MSRG-11; MGC107213; 4930504I07Rik; 4930513F16Rik; 1700065F16Rik	MSRG-11; MGC107213; 4930504I07Rik; 4930513F16Rik; 1700065F16Rik
Mus musculus	RefSeq	ILMN_215122	ILMN_215122	A730008L03RIK	NM_021393.1	NM_021393.1		58202	10946737	NM_021393.1	A730008L03Rik	NP_067368.1	ILMN_2655803	000150059	S	1910	CCGTCATGTGCTGAGGCTTCTCCTCCACTTGCATGCAAGAGTGGCCCCTT	2	-	25056222-25056271	2qA3	Mus musculus RIKEN cDNA A730008L03 gene (A730008L03Rik), mRNA.				Cobra1; AI663983; Nelf-b; AB041607	Cobra1; AI663983; Nelf-b; AB041607
Mus musculus	RefSeq	ILMN_215122	ILMN_215122	A730008L03RIK	NM_021393.1	NM_021393.1		58202	10946737	NM_021393.1	A730008L03Rik	NP_067368.1	ILMN_2873174	004230253	S	2282	GGTCCCAAAAGGTCCTCCCTCAGTGGTCTACTTGCATATCATAGGGGGCC	2	-	25055658-25055707	2qA3	Mus musculus RIKEN cDNA A730008L03 gene (A730008L03Rik), mRNA.				Cobra1; AI663983; Nelf-b; AB041607	Cobra1; AI663983; Nelf-b; AB041607
Mus musculus	MEEBO	ILMN_210594	ILMN_210594	2310076L09RIK	scl49774.8.1_3	NM_025874.2			27754108	NM_025874.2	2310076L09Rik		ILMN_2607215	001110129	S	882	GGGCAAGCCCTAGCCCTACTTTCCATCCCCCAAAGACTCAGGAGCTGTGG						Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]				
Mus musculus	RefSeq	ILMN_199041	ILMN_199041	LOC237403	XM_137156.2	XM_137156.2			38090574	XM_137156.2	LOC237403		ILMN_2533835	003390370	S	1811	AACTTCTCTGTGGAATATTCCTTCCGTAAGGTGGACGGTCCGGCGGCTGC										
Mus musculus	MEEBO	ILMN_219533	ILMN_219533	OLFR313	scl41514.1.1_155				33239057	NM_146536	Olfr313		ILMN_2775191	001710706	S	300	CATATTTCTCACATTCTCTTCTTCTGAATGCTTTCTGCTCACAGCCATGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223004	ILMN_223004	DLAT	NM_145614.3	NM_145614.3		235339	141801999	NM_145614.3	Dlat	NP_663589.2	ILMN_2757993	006770619	S	3648	TGCACGACGACACTCCAAACTGTCCACAAGCCTCCAATGGCCGTGTTTCT	9	-	50443075-50443124	9qA5.3	Mus musculus dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) (Dlat), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA in eukaryotes; includes subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). Usually contains more subunits than its bacterial counterpart; for example, one known complex contains 30 E1 dimers, 60 E2 monomers, and 6 E3 dimers as well as a few copies of pyruvate dehydrogenase kinase and pyruvate dehydrogenase phosphatase [goid 5967] [evidence TAS]; Complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA; comprises subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3) [goid 45254] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate [goid 6086] [evidence IC ]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving pyruvate, 2-oxopropanoate [goid 6090] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with lipoic acid, 1,2-dithiolane-3-pentanoic acid [goid 31405] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + dihydrolipoamide = CoA + S-acetyldihydrolipoamide [goid 4742] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PDC-E2; 6332404G05Rik; DLTA	PDC-E2; 6332404G05Rik; DLTA
Mus musculus	RefSeq	ILMN_202378	ILMN_252108	4930527J03RIK	XM_919429.2	XM_919429.2		75164	94364631	XM_919429.2	4930527J03Rik	XP_924522.1	ILMN_1214013	005290037	S	525	CGCGCGAACCCCGGCGGCGGTTAGGTTTTGTAAATGAATTTAAGAAGTGG				1qH4	PREDICTED: Mus musculus RIKEN cDNA 4930527J03 gene (4930527J03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217545	ILMN_217545	OLFR1278	NM_146394.1	NM_146394.1		258389	33238997	NM_146394.1	Olfr1278	NP_666506.1	ILMN_2684538	005130398	S	585	GCAGTTCATGGTTACTGCCAACAGTGGGTTTATTTCCATGGGCACCTTTT	2	+	111133011-111133060	2qE3	Mus musculus olfactory receptor 1278 (Olfr1278), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR245-11	MOR245-11
Mus musculus	RefSeq	ILMN_210214	ILMN_210214	HOXA1	NM_010449.3	NM_010449.3		15394	144922691	NM_010449.3	Hoxa1	NP_034579.2	ILMN_2603334	000650402	S	2143	TCCATTTACTGTACAATCATGAACAGCTCTGAGATCCTGGAGTGATGTGG	6	-	52105647-52105696	6qB3	Mus musculus homeo box A1 (Hoxa1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21570] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21571] [evidence IMP]; The process whose specific outcome is the progression of the facial nucleus over time, from its formation to the mature structure [goid 21754] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21570] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21570] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21571] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21569] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21571] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21569] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; The process that contributes to the act of creating the structural organization of the facial nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities [goid 21612] [evidence IGI]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	ERA1; Hox-1.6	ERA1; Hox-1.6
Mus musculus	RefSeq	ILMN_210214	ILMN_210214	HOXA1	NM_010449.3	NM_010449.3		15394	144922691	NM_010449.3	Hoxa1	NP_034579.2	ILMN_2703854	006130703	S	481	CCCGCTGTTTACTCTGGAAACCTCTCGACTCCCATGGTCCAGCATCACCA	6	-	52107786-52107835	6qB3	Mus musculus homeo box A1 (Hoxa1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21570] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21571] [evidence IMP]; The process whose specific outcome is the progression of the facial nucleus over time, from its formation to the mature structure [goid 21754] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21570] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21570] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21571] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21569] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21571] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21569] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IMP]; The process that contributes to the act of creating the structural organization of the facial nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities [goid 21612] [evidence IGI]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	ERA1; Hox-1.6	ERA1; Hox-1.6
Mus musculus	RefSeq	ILMN_216488	ILMN_216488	ADRA2B	NM_009633.3	NM_009633.3		11552	111548655	NM_009633.3	Adra2b	NP_033763.2	ILMN_2688190	004060228	S	1251	AGTATTCAACCCACCCTTGCAGCAGCCTCAGACTTCCCGGGTGCTGGCCA	2	+	127190272-127190321	2qF1	Mus musculus adrenergic receptor, alpha 2b (Adra2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4935] [evidence IMP];  [goid 4938] [evidence IDA]	alpha2B; alpha2-C2; [a]2B; Adra-2b	alpha2B; alpha2-C2; [a]2B; Adra-2b
Mus musculus	RefSeq	ILMN_216488	ILMN_216488	ADRA2B	NM_009633.3	NM_009633.3		11552	111548655	NM_009633.3	Adra2b	NP_033763.2	ILMN_1228610	006220687	S	3862	CCCCCTGTTGTGACATATAGGTGTTTCTAAGACTCTGAGCTATTTTATCA	2	+	127192883-127192932	2qF1	Mus musculus adrenergic receptor, alpha 2b (Adra2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4935] [evidence IMP];  [goid 4938] [evidence IDA]	alpha2B; alpha2-C2; [a]2B; Adra-2b	alpha2B; alpha2-C2; [a]2B; Adra-2b
Mus musculus	RefSeq	ILMN_216488	ILMN_216488	ADRA2B	NM_009633.3	NM_009633.3		11552	111548655	NM_009633.3	Adra2b	NP_033763.2	ILMN_1215724	005860132	S	1560	CATCTACACCATCTTCAACCAGGACTTCCGCCGTGCCTTTCGAAGGATCC	2	+	127190581-127190630	2qF1	Mus musculus adrenergic receptor, alpha 2b (Adra2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4935] [evidence IMP];  [goid 4938] [evidence IDA]	alpha2B; alpha2-C2; [a]2B; Adra-2b	alpha2B; alpha2-C2; [a]2B; Adra-2b
Mus musculus	RefSeq	ILMN_189323	ILMN_259799	ADAM10	NM_007399.1	NM_007399.1		11487	6680637	NM_007399.1	Adam10	NP_031425.1	ILMN_1241149	005870189	S	2381	GTTGAAGAAAAAATGGCAAGAGATCATGTCCTCAGATCAGGTGGAATTAC	9	+	70577416-70577465	9qD	Mus musculus a disintegrin and metallopeptidase domain 10 (Adam10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence NAS]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [evidence NAS]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	kuzbanian; kuz; MADM; 1700031C13Rik	kuzbanian; kuz; MADM; 1700031C13Rik
Mus musculus	RefSeq	ILMN_215150	ILMN_215150	SECTM1A	NM_145373.2	NM_145373.2		209588	114205432	NM_145373.2	Sectm1a	NP_663348.2	ILMN_2656108	007650008	S	286	ACATCTCTAACACCTTCACCGATGTCACCATCCAGCTGTCTGCCAATGGA	11	-	120931088-120931137	11qE2	Mus musculus secreted and transmembrane 1A (Sectm1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			RP23-400P17.4; BC010462; MGC7970	RP23-400P17.4; BC010462; MGC7970
Mus musculus	RefSeq	ILMN_201184	ILMN_201184	LOC384906	XM_357934.1	XM_357934.1			38089679	XM_357934.1	LOC384906		ILMN_1226010	006560600	S	360	GCAGGGTGATTTTATGGCTGTCAGGGGCCCAGAATCAGACCAGAGAGTGG										
Mus musculus	Riken	ILMN_205189	ILMN_205189	D030019N20RIK	ri|D030019N20|PX00179B01|AK050786|1930					AK050786	D030019N20Rik		ILMN_1214926	001690048	S	1856	GGCTCTCTGTGAGTGAGGCCAGCCTGGTCAACATAGTTCCAAGGCAGCCA										
Mus musculus	RefSeq	ILMN_198079	ILMN_198079	PNLDC1	XM_139740.8	XM_139740.8		240023	149268416	XM_139740.8	Pnldc1	XP_139740.6	ILMN_2530417	006290433	S	1747	TAAGGATGCCCGCAGTGTCTTGAAGGAGTACAGGAACCACCCAACCCTGC	17	-	13082996-13083040:13083145-13083149	17qA1	PREDICTED: Mus musculus poly(A)-specific ribonuclease (PARN)-like domain containing 1 (Pnldc1), mRNA.					
Mus musculus	MEEBO	ILMN_194570	ILMN_194570	4833428L15RIK	scl35927.7.1_25						4833428L15Rik		ILMN_2507628	000870368	S	15	CCCTCCACTCCCGTGCAGATTTATCTTGATTGACCTGACGCTACTTGGAT										
Mus musculus	MEEBO	ILMN_215753	ILMN_215753	OLFR118	scl00404308.1_197				47523371	NM_213721	Olfr118		ILMN_2663239	002650102	S	775	GCTCAGGATCTATTACCTACTTGAGGCCCAAATCTAGTCACTTACCAGGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_197459	ILMN_197459	LOC380896	XM_354810.1	XM_354810.1			38076065	XM_354810.1	LOC380896		ILMN_1254317	002940463	S	529	GCTCCCAGAGCCAAAGCGTGACAGAACTAGTGCATATGGTATTTGTGAGC										
Mus musculus	RefSeq	ILMN_215903	ILMN_215903	MAPRE1	NM_007896.3	NM_007896.3		13589	116063571	NM_007896.3	Mapre1	NP_031922.1	ILMN_2664972	001710703	S	2407	CGAGCCATTGTTCAAACGACAGCGGTGCTGTTTCTCCTCTGTGGCCTTTC	2	+	153594130-153594179	2qH1	Mus musculus microtubule-associated protein, RP/EB family, member 1 (Mapre1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; Interacting selectively with the plus end of a microtubule [goid 51010] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI504412; AI462499; AW260097; D2Ertd459e; BIM1p; 5530600P05Rik; Eb1	AI504412; AI462499; AW260097; D2Ertd459e; BIM1p; 5530600P05Rik; Eb1
Mus musculus	RefSeq	ILMN_250379	ILMN_250379	OLFR1105	NM_001011825.1	NM_001011825.1		258085	58801413	NM_001011825.1	Olfr1105	NP_001011825.1	ILMN_3161197	004830753	S	684	ACATTCTGCCAGGGGAAGTTATAAGGCTTTATCCACTTGTGCGTCCCACC	2	-	86873643-86873692	2qD	Mus musculus olfactory receptor 1105 (Olfr1105), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR172-7; MOR0-6P	MOR172-7; MOR0-6P
Mus musculus	RefSeq	ILMN_209937	ILMN_209937	SPEER9-PS1	NR_001583.2	NR_001583.2		73949	141803248	NR_001583.2	Speer9-ps1		ILMN_2600597	003120224	S	437	TGACTCTCATGGTCACCTCGGCCATTCGAAGGGAGCTCAGCAGTCCAGCT	7	+	3144655-3144704	7qA1	Mus musculus spermatogenesis associated glutamate (E)-rich protein 9, pseudogene 1 (Speer9-ps1), non-coding RNA.				SPEER-9; Speer9-ps; 4930415A14Rik	SPEER-9; Speer9-ps; 4930415A14Rik
Mus musculus	RefSeq	ILMN_216030	ILMN_224880	OPA1	NM_133752.2	NM_133752.2		74143	118130906	NM_133752.2	Opa1	NP_598513.1	ILMN_1218742	004830504	S	2243	CCCGCTTCATGACAGAACCCAAAGGAAAGGAACACGACGACATATTTGAC	16	+	29620498-29620547	16qB2	Mus musculus optic atrophy 1 homolog (human) (Opa1), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]	AI847218; AI225888; mKIAA0567; 1200011N24Rik	AI847218; AI225888; mKIAA0567; 1200011N24Rik
Mus musculus	RefSeq	ILMN_216030	ILMN_224880	OPA1	NM_133752.2	NM_133752.2		74143	118130906	NM_133752.2	Opa1	NP_598513.1	ILMN_1247460	006110546	S	3681	CATTGCCAGCTTAGAAACTCGCCTTGGAAGCCAACCGCAGCAGCGTGCAG	16	+	29652429-29652478	16qB2	Mus musculus optic atrophy 1 homolog (human) (Opa1), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]	AI847218; AI225888; mKIAA0567; 1200011N24Rik	AI847218; AI225888; mKIAA0567; 1200011N24Rik
Mus musculus	RefSeq	ILMN_216030	ILMN_224880	OPA1	NM_133752.2	NM_133752.2		74143	118130906	NM_133752.2	Opa1	NP_598513.1	ILMN_1243717	005420471	S	1132	CGGATCTTCCCGAGAGGGTCCGGCGAGATGATGACACGCTCTCCAGTGAA	16	+	29608502-29608551	16qB2	Mus musculus optic atrophy 1 homolog (human) (Opa1), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]	AI847218; AI225888; mKIAA0567; 1200011N24Rik	AI847218; AI225888; mKIAA0567; 1200011N24Rik
Mus musculus	MEEBO	ILMN_194196	ILMN_194196	GCAP26	scl0014480.1_16						Gcap26		ILMN_2504268	001440408	S	19	AGAGCTCGTCGCAGGTGTGTCTAATGGCCCTTGGGTGCACGTGGTTAAGC										
Mus musculus	Riken	ILMN_203143	ILMN_203143	6030452M24RIK	ri|6030452M24|PX00057L18|AK031560|2649					AK031560	6030452M24Rik		ILMN_1242339	003780523	S	2396	GGCCTGGGGTAGGATGACAAGCATTCCCATCTTCTTTGTCTAGTTCCCTG										
Mus musculus	Riken	ILMN_201806	ILMN_201806	2510025K24RIK	ri|2510042J05|ZX00060E22|AK011093|1137					AK011093	2510025K24Rik		ILMN_1235980	000290463	S	766	GCGGTCACAGTCAGGCTTGGTATTGTTCCTGAGAAGCCGTGCACCTTGTG										
Mus musculus	Riken	ILMN_207388	ILMN_207388	C530030I18RIK	ri|C530030I18|PX00669K10|AK083001|3082					AK083001	C530030I18Rik		ILMN_1242933	001470162	S	2807	GCTACTATATTTTGCTCAGGCTCCCTGCCACAGATGTCTAGAGTACCTGG										
Mus musculus	RefSeq	ILMN_210358	ILMN_210358	1110012L19RIK	NM_026787.1	NM_026787.1		68618	21312069	NM_026787.1	1110012L19Rik	NP_081063.1	ILMN_3144761	006280639	A	691	CCAGGTAGACATCCCAGAGCACTTGATCCCACTGGAGAAAGAATGACTGC	X	+	66649606-66649648:66649649-66649655	XqA7.1	Mus musculus RIKEN cDNA 1110012L19 gene (1110012L19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210358	ILMN_210358	1110012L19RIK	NM_026787.1	NM_026787.1		68618	21312069	NM_026787.1	1110012L19Rik	NP_081063.1	ILMN_2604806	007040445	S	174	GTGTAAACTGGAGTCTGCCGCGTGATAAGTGACAAAGCTGAGAGGCCCAC	X	+	66646642-66646691	XqA7.1	Mus musculus RIKEN cDNA 1110012L19 gene (1110012L19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187748	ILMN_318021	LOC100045988	XM_001475309.1	XM_001475309.1		100045988	149266294	XM_001475309.1	LOC100045988	XP_001475359.1	ILMN_2446791	004590608	S	528	ATGCGGCAGCCAATCAAGCGGGAGCTCATCTGCAAGTGGCTGGACCCAGA					PREDICTED: Mus musculus similar to OPR (LOC100045988), mRNA.					
Mus musculus	RefSeq	ILMN_198273	ILMN_198273	LOC240482	XM_140524.3	XM_140524.3			38083547	XM_140524.3	LOC240482		ILMN_1219341	001030528	S	339	TAAATTTGAGGGCAAACATGGCTCCAAGGAAAACTGGAAGGGGGTGGTGC										
Mus musculus	RefSeq	ILMN_192590	ILMN_235588	CNOT4	NM_016877.3	NM_016877.3		53621	142381083	NM_016877.3	Cnot4	NP_058573.2	ILMN_2738972	001580324	S	2987	GTTGTAATAGATAGCCTTAGATGATCAGAGATCAGTGAGTGGGGTACTTC	6	-	34995255-34995304	6qB1	Mus musculus CCR4-NOT transcription complex, subunit 4 (Cnot4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Not4hp; Not4h; Not4	Not4hp; Not4h; Not4
Mus musculus	RefSeq	ILMN_192590	ILMN_235588	CNOT4	NM_016877.3	NM_016877.3		53621	142381083	NM_016877.3	Cnot4	NP_058573.2	ILMN_2657911	005420315	S	301	GTGAAGATGTCTCGCAGTCCTGATGCAAAGGAAGACCCTGTGGAATGCCC	6	-	35030090-35030134:35030135-35030139	6qB1	Mus musculus CCR4-NOT transcription complex, subunit 4 (Cnot4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Not4hp; Not4h; Not4	Not4hp; Not4h; Not4
Mus musculus	RefSeq	ILMN_245655	ILMN_245655	D17H6S53E	NM_033477.1	NM_033477.1		114585	51591904	NM_033477.1	D17H6S53E	NP_258438.1	ILMN_3161414	003520255	S	779	GCCTCCGGGAACCTGTTGAAGATGAGGAGACCGCTGATTGGGAGAGTGAG	17	+	35264838-35264887	17qB1	Mus musculus DNA segment, Chr 17, human D6S53E (D17H6S53E), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	G4; NG34	G4; NG34
Mus musculus	RefSeq	ILMN_213822	ILMN_213822	NPHP4	NM_153424.2	NM_153424.2		260305	124244072	NM_153424.2	Nphp4	NP_700473.2	ILMN_2641152	006060307	S	4727	GCGTCCCTAGCCATGGTATACCTCCGAGAGTAATCCTCCACTCGAGAGTG	4	+	151936992-151937041	4qE2	Mus musculus nephronophthisis 4 (juvenile) homolog (human) (Nphp4), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]			4930564O18Rik	4930564O18Rik
Mus musculus	RefSeq	ILMN_209054	ILMN_209054	BRPF1	NM_030178.1	NM_030178.1		78783	30794209	NM_030178.1	Brpf1	NP_084454.1	ILMN_2800861	003870167	S	4277	CAGCCTAGCCGTGGGATTGATGTCTGTCTAGCCTGGAAGAGGGGCACTAG	6	+	113274545-113274594	6qE3	Mus musculus bromodomain and PHD finger containing, 1 (Brpf1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Brpf2; 4833438B11Rik; 4930540D11Rik	Brpf2; 4833438B11Rik; 4930540D11Rik
Mus musculus	RefSeq	ILMN_209054	ILMN_209054	BRPF1	NM_030178.1	NM_030178.1		78783	30794209	NM_030178.1	Brpf1	NP_084454.1	ILMN_2800859	004670240	S	4180	ACAGGCCCTACCACCCTTACCTACTCATGCCAGGGGAATTCATACCTGCC	6	+	113274448-113274497	6qE3	Mus musculus bromodomain and PHD finger containing, 1 (Brpf1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Brpf2; 4833438B11Rik; 4930540D11Rik	Brpf2; 4833438B11Rik; 4930540D11Rik
Mus musculus	RefSeq	ILMN_260275	ILMN_260275	2010111I01RIK	NM_028079.1	NM_028079.1		72061	110625915	NM_028079.1	2010111I01Rik	NP_082355.1	ILMN_2838372	003520092	S	2664	GGACAGAGCATCGGCCCAGGTGGTGACTGAAATGCTGTTCTAAAGAGGTA				13qB3	Mus musculus RIKEN cDNA 2010111I01 gene (2010111I01Rik), mRNA. XM_988363	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISS]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence ISS]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence ISS]	2300006M17Rik; Aopep	2300006M17Rik; Aopep
Mus musculus	MEEBO	ILMN_209080	ILMN_209080	1700092C17RIK	scl21215.2.1_31	NM_183102.1			34147086	NM_183102.1	1700092C17Rik		ILMN_2592338	003180056	S	92	CACCTGAAGAAGTCTCCTGCTTAGTACATCATGACTTCCATCGCCTCCTC										
Mus musculus	RefSeq	ILMN_213202	ILMN_213202	IFT81	NM_009879.2	NM_009879.2		12589	15638941	NM_009879.2	Ift81	NP_034009.2	ILMN_2993804	005090152	S	2418	TGAGGACTGACGGGTAATGCTCTTCTCAGTCTGTCTCTGACTTGGAGGAC	5	-	123000695-123000744	5qF	Mus musculus intraflagellar transport 81 homolog (Chlamydomonas) (Ift81), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12549821] [evidence IEP]		CDV-1R; CDV-1; AW060663; Cdv1	CDV-1R; CDV-1; AW060663; Cdv1
Mus musculus	RefSeq	ILMN_213202	ILMN_213202	IFT81	NM_009879.2	NM_009879.2		12589	15638941	NM_009879.2	Ift81	NP_034009.2	ILMN_2735422	005080347	S	2137	CTGTGTCGGCCGGGCTTAAGTCGCATCTGCGTAACGTGATTTCTTCTCGG	5	-	123000976-123001025	5qF	Mus musculus intraflagellar transport 81 homolog (Chlamydomonas) (Ift81), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12549821] [evidence IEP]		CDV-1R; CDV-1; AW060663; Cdv1	CDV-1R; CDV-1; AW060663; Cdv1
Mus musculus	RefSeq	ILMN_213202	ILMN_213202	IFT81	NM_009879.2	NM_009879.2		12589	15638941	NM_009879.2	Ift81	NP_034009.2	ILMN_2634702	005720360	S	2382	ATGTGTCCATTAAGAACCACGTAGCTTCTCAAGCTGTGAGGACTGACGGG	5	-	123000731-123000780	5qF	Mus musculus intraflagellar transport 81 homolog (Chlamydomonas) (Ift81), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12549821] [evidence IEP]		CDV-1R; CDV-1; AW060663; Cdv1	CDV-1R; CDV-1; AW060663; Cdv1
Mus musculus	RefSeq	ILMN_222864	ILMN_222864	ASRGL1	NM_025610.3	NM_025610.3		66514	141803298	NM_025610.3	Asrgl1	NP_079886.2	ILMN_1224874	003940523	S	1982	CAAGACCAGAACAGATACAAGCTCCCTTCTTGGTCCTTTAGCGCAGGCAG	19	-	9186451-9186500	19qA	Mus musculus asparaginase like 1 (Asrgl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate L-aspartate [goid 33345] [evidence ISO]	Catalysis of the reaction: L-asparagine + H2O = L-aspartate + NH3 [goid 4067] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ALP1; AW060375; AU040643; 2410004D18Rik; ALP	ALP1; AW060375; AU040643; 2410004D18Rik; ALP
Mus musculus	RefSeq	ILMN_198114	ILMN_253294	LOC242997	XM_977217.1	XM_977217.1		242997	94376301	XM_977217.1	LOC242997	XP_982311.1	ILMN_2530542	004640192	S	2200	GGCCTCGGAACAGTCACATCCAAGCCCCTTTCCGCTAAACACCTACCTTT				5qC1	PREDICTED: Mus musculus gene model 447, (NCBI) (LOC242997), mRNA.					
Mus musculus	RefSeq	ILMN_207128	ILMN_229754	SETDB2	XM_985000.1	XM_985000.1		239122	94397577	XM_985000.1	Setdb2	XP_990094.1	ILMN_1238529	001780523	S	1215	CCCGCCGAACCTTCAAACGCTGGTCAAATTCCTAACTTGTTGCTCTAATC				14qC3	PREDICTED: Mus musculus SET domain, bifurcated 2, transcript variant 3 (Setdb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195331	ILMN_195331	4930505H01RIK	scl50572.1_48						4930505H01Rik		ILMN_1221008	001710064	S	2	GTGAAATAGGCAACCACAAGAACCCCGTCACCACATTTGATGAGTTGTCC										
Mus musculus	MEEBO	ILMN_191184	ILMN_191184	1110033L15RIK	scl073752.4_114						1110033L15Rik		ILMN_2476881	003520037	S	15	GGCGAGAGAGTGAACTTCCTGAAGGCAAACAGACAAGAAGGGTGGGAGAC										
Mus musculus	MEEBO	ILMN_186767	ILMN_186767	ITPKB	scl14296.1.1_54				51705428	XM_205854	Itpkb		ILMN_2438338	004540041	S	6	TTAGCTTCGAGAGCGCCTGTCTTCTGACAACCCTCTGTGTATAGGCCCCA							Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The process of T cell selection that occurs in the thymus [goid 45061] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IDA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IMP]		
Mus musculus	MEEBO	ILMN_214036	ILMN_214036	ANGPTL6	scl36159.7.1_126				21699061	NM_145154	Angptl6		ILMN_2643534	002690253	S	1429	TCCGTGGTGGGGCGTACTCTCTGAAGAAAGCTGTTATGTTGACCCGGCTT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215995	ILMN_215995	CLDN16	NM_053241.2	NM_053241.2		114141	31981495	NM_053241.2	Cldn16	NP_444471.1	ILMN_2954714	006770600	S	814	GGTTGGTCCTGCTGGCTTGGAATGGCTGGGTCTTTGGGTTGCTTTTTGGC	16	+	26396659-26396708	16qB2	Mus musculus claudin 16 (Cldn16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	claudin-16; PCLN1	claudin-16; PCLN1
Mus musculus	MEEBO	ILMN_224192	ILMN_224192	D830013H23RIK	scl39539.1.1_311				31342362	NM_176906	D830013H23Rik		ILMN_2776314	002630017	S	1568	CCTTGAACTCAGCTGTTGCTGTTGTCCCAGTTTACTGATTCCTGTCCACC								Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211466	ILMN_211466	SOX11	scl0020666.1_225	NM_009234.3			46049032	NM_009234.3	Sox11		ILMN_2616196	000990681	S	2731	CGCTGTGATGTGTGGACGGGGCCCCAGACGGAAGGTTTGAAACTGGATTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence ISO]		
Mus musculus	RefSeq	ILMN_214877	ILMN_214877	EVI1	NM_007963.1	NM_007963.1		14013	6679704	NM_007963.1	Evi1	NP_031989.1	ILMN_2668165	000360402	S	2891	GCTGTCCTCCATTAGTTCTTCTCATGTGCCAGAGGAGCTTAAACAGACGT	3	-	29855251-29855300	3qA3	Mus musculus ecotropic viral integration site 1 (Evi1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus [goid 9605] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery [goid 60039] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The process of regulating the proliferation and elimination of neutrophils such that the total number of neutrophils within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1780] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Evi-1; D630039M04Rik; Jbo	Evi-1; D630039M04Rik; Jbo
Mus musculus	RefSeq	ILMN_214877	ILMN_214877	EVI1	NM_007963.1	NM_007963.1		14013	6679704	NM_007963.1	Evi1	NP_031989.1	ILMN_2916149	004150520	S	2811	TTCTGCTCTAGATCACATAAGGCACTTCACAGATAGCCTCAAAATGAGGG	3	-	29855331-29855380	3qA3	Mus musculus ecotropic viral integration site 1 (Evi1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus [goid 9605] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery [goid 60039] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The process of regulating the proliferation and elimination of neutrophils such that the total number of neutrophils within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1780] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Evi-1; D630039M04Rik; Jbo	Evi-1; D630039M04Rik; Jbo
Mus musculus	RefSeq	ILMN_214877	ILMN_214877	EVI1	NM_007963.1	NM_007963.1		14013	6679704	NM_007963.1	Evi1	NP_031989.1	ILMN_1217576	004730427	S	2886	CGCTGAGCTGTCCTCCATTAGTTCTTCTCATGTGCCAGAGGAGCTTAAAC	3	-	29855256-29855305	3qA3	Mus musculus ecotropic viral integration site 1 (Evi1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus [goid 9605] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery [goid 60039] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The process of regulating the proliferation and elimination of neutrophils such that the total number of neutrophils within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1780] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Evi-1; D630039M04Rik; Jbo	Evi-1; D630039M04Rik; Jbo
Mus musculus	RefSeq	ILMN_213852	ILMN_213852	IDH3G	NM_008323.1	NM_008323.1		15929	6680344	NM_008323.1	Idh3g	NP_032349.1	ILMN_2997022	007380719	S	1256	AGGACTCTCTTCTCACTTTAGCACTCCAGCTAGCTTGGGGGACAGGACCC	X	-	71025425-71025462:71025415-71025426	XqA7.3	Mus musculus isocitrate dehydrogenase 3 (NAD+), gamma (Idh3g), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH + H+ [goid 4449] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213852	ILMN_213852	IDH3G	NM_008323.1	NM_008323.1		15929	6680344	NM_008323.1	Idh3g	NP_032349.1	ILMN_1224368	006420324	S	296	ACTTTGAAGAGGTGCATGTAAGCTCCAACGCTGATGAGGAGGACATCCGC	X	-	71027397-71027442:71027637-71027640	XqA7.3	Mus musculus isocitrate dehydrogenase 3 (NAD+), gamma (Idh3g), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH + H+ [goid 4449] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187655	ILMN_258978	D17WSU92E	NM_001033279.2	NM_001033279.2		224647	113461983	NM_001033279.2	D17Wsu92e	NP_001028451.2	ILMN_1257938	000940681	S	3712	CGTGGTGCCTAGGAGATGAAGATGAGGTTTTCCTTACCGTGTAAATGAAT	17	-	27889275-27889324	17qA3.3	Mus musculus DNA segment, Chr 17, Wayne State University 92, expressed (D17Wsu92e), transcript variant 1, mRNA. XM_915193 XM_923626 XM_923628 XM_923630 XM_923632				C030010A15; AU020189; C80239	C030010A15; AU020189; C80239
Mus musculus	RefSeq	ILMN_258978	ILMN_258978	D17WSU92E	NM_001033279.2	NM_001033279.2		224647	113461983	NM_001033279.2	D17Wsu92e	NP_001028451.2	ILMN_3163068	006330025	A	893	GACCCTGGGGGTTCCGAGTTCGACTCGATCAGCAAAAATACATGGGCTCC	17	-	27925955-27926004	17qA3.3	Mus musculus DNA segment, Chr 17, Wayne State University 92, expressed (D17Wsu92e), transcript variant 1, mRNA. XM_915193 XM_923626 XM_923628 XM_923630 XM_923632				C030010A15; AU020189; C80239	C030010A15; AU020189; C80239
Mus musculus	RefSeq	ILMN_187655	ILMN_258978	D17WSU92E	NM_001033279.2	NM_001033279.2		224647	113461983	NM_001033279.2	D17Wsu92e	NP_001028451.2	ILMN_1225137	005860685	S	2675	TGAGACGGGGCTTCTGTGTGACCCTTACTTCCTCTGCACACTGGGACCCT	17	-	27890312-27890361	17qA3.3	Mus musculus DNA segment, Chr 17, Wayne State University 92, expressed (D17Wsu92e), transcript variant 1, mRNA. XM_915193 XM_923626 XM_923628 XM_923630 XM_923632				C030010A15; AU020189; C80239	C030010A15; AU020189; C80239
Mus musculus	RefSeq	ILMN_190644	ILMN_226882	AFAP1	NM_027373.2	NM_027373.2		70292	78486554	NM_027373.2	Afap1	NP_081649.1	ILMN_1215073	002810647	S	963	TACAGTGGCTGTAGCGGGCCCGTGGATCCGGAATGTTCTCCACCACCCAG	5	+	36304410-36304459	5qB3	Mus musculus actin filament associated protein 1 (Afap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence ISO]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	AI848729; mKIAA3018; Afap; 9630044L16Rik; 2600003E23Rik	AI848729; mKIAA3018; Afap; 9630044L16Rik; 2600003E23Rik
Mus musculus	RefSeq	ILMN_190644	ILMN_226882	AFAP1	NM_027373.2	NM_027373.2		70292	78486554	NM_027373.2	Afap1	NP_081649.1	ILMN_2699691	006250692	S	2536	CCCTTGGCTGGCTTGCGTGCACGCTTTCTACTGTATGACGGTGCCCTTTA	5	+	36342490-36342539	5qB3	Mus musculus actin filament associated protein 1 (Afap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence ISO]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	AI848729; mKIAA3018; Afap; 9630044L16Rik; 2600003E23Rik	AI848729; mKIAA3018; Afap; 9630044L16Rik; 2600003E23Rik
Mus musculus	RefSeq	ILMN_190644	ILMN_226882	AFAP1	NM_027373.2	NM_027373.2		70292	78486554	NM_027373.2	Afap1	NP_081649.1	ILMN_1258292	006350176	S	2263	CTCCCATCTCCAGCTGTGATACAAGCGATGCTGAGGGGCCTTTGCCTGTG	5	+	36340201-36340250	5qB3	Mus musculus actin filament associated protein 1 (Afap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence ISO]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	AI848729; mKIAA3018; Afap; 9630044L16Rik; 2600003E23Rik	AI848729; mKIAA3018; Afap; 9630044L16Rik; 2600003E23Rik
Mus musculus	RefSeq	ILMN_201974	ILMN_217006	PSMD8	NM_026545.2	NM_026545.2		57296	141802467	NM_026545.2	Psmd8	NP_080821.2	ILMN_2546047	004900156	S	508	CTCGGTTCTGAGATAGCAGGAAGAGGAGATTGAGGCCCAGGAGCTGGTGC	7	-	29962124-29962173	7qB1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 (Psmd8), mRNA. XM_001002011	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex [goid 5838] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]		AL033291; C76433; AL033322; AA407360; 6720456J22Rik; AL033323	AL033291; C76433; AL033322; AA407360; 6720456J22Rik; AL033323
Mus musculus	RefSeq	ILMN_217006	ILMN_217006	PSMD8	NM_026545.2	NM_026545.2		57296	141802467	NM_026545.2	Psmd8	NP_080821.2	ILMN_2678019	005420520	S	1174	GGGACTCTTCTATCCAGCTGTGGATGCGTTTTGGTGTTGGGCCAGGGACT	7	-	29959353-29959402	7qB1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 (Psmd8), mRNA. XM_001002011	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex [goid 5838] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]		AL033291; C76433; AL033322; AA407360; 6720456J22Rik; AL033323	AL033291; C76433; AL033322; AA407360; 6720456J22Rik; AL033323
Mus musculus	RefSeq	ILMN_211394	ILMN_211394	S100A10	NM_009112.2	NM_009112.2		20194	113930762	NM_009112.2	S100a10	NP_033138.1	ILMN_1256702	006840180	S	494	GCAGATCAGGACCCTTAGGAAATGTGCAAATGAGATCCAACTCCAATTCA	3	+	93368411-93368460	3qF2.1	Mus musculus S100 calcium binding protein A10 (calpactin) (S100a10), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CAL12; AA409961; p11; p10; AL024248; 42C; CLP11; Cal1l	CAL12; AA409961; p11; p10; AL024248; 42C; CLP11; Cal1l
Mus musculus	Riken	ILMN_202905	ILMN_202905	6530401O14RIK	ri|6530401O14|PX00048J12|AK032642|2391					AK032642	6530401O14Rik		ILMN_1256402	001940681	S	2052	CGATCTGTGTCCTTGTGTTGGAGGTGCTGATGCTGCACACCCTTCTGGTG										
Mus musculus	RefSeq	ILMN_198979	ILMN_235519	1700001J11RIK	XR_001635.2	XR_001635.2		72224	149259574	XR_001635.2	1700001J11Rik		ILMN_1253445	004760576	S	2370	AATGTCCTGTAGTCACCATTCCAGGGGTTGCCACGCCCACTTCCCAGCTG				9qA5.1	PREDICTED: Mus musculus RIKEN cDNA 1700001J11 gene (1700001J11Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_189994	ILMN_235519	1700001J11RIK	XR_001635.2	XR_001635.2		72224	149259574	XR_001635.2	1700001J11Rik		ILMN_2466245	002810433	S	161	GGATCTTTTTTACATCATGACTTCATCTGAACGCAAGAACAAGAAATAGG				9qA5.1	PREDICTED: Mus musculus RIKEN cDNA 1700001J11 gene (1700001J11Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_214859	ILMN_214859	ELOVL5	NM_134255.2	NM_134255.2		68801	31981652	NM_134255.2	Elovl5	NP_599016.2	ILMN_2652757	004150184	S	2525	GTCCTAATTAGCCTTGTGGGTTTTCTGTTTGGAAGGAGTTGCGGCATCTG	9	+	77832073-77832122	9qE1	Mus musculus ELOVL family member 5, elongation of long chain fatty acids (yeast) (Elovl5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]		HELO1; AU043003; AI747313; 1110059L23Rik	HELO1; AU043003; AI747313; 1110059L23Rik
Mus musculus	RefSeq	ILMN_210877	ILMN_311513	LOC100043972	XM_001472767.1	XM_001472767.1		100043972	149266195	XM_001472767.1	LOC100043972	XP_001472817.1	ILMN_1233448	006980519	S	312	GTCAGACTCTGCCCTGTACTACTGTGCTTTGAGTGACACAGTGAGGGAGA	14	+	53557489-53557538		PREDICTED: Mus musculus similar to OTTMUSG00000015204 protein (LOC100043972), mRNA.					
Mus musculus	RefSeq	ILMN_219759	ILMN_219759	F11R	NM_172647.2	NM_172647.2		16456	87116673	NM_172647.2	F11r	NP_766235.1	ILMN_2713305	002710307	S	2309	CTCATAACTACGCTGCGCTTCAGACGTCTCAAACTTCAACCAACTCGGCT	1	+	173394551-173394600	1qH3	Mus musculus F11 receptor (F11r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IMP]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Jcam1; JAM; JAM-A; AA638916; JAM-1; Ly106; 9130004G24; Jcam; ESTM33	Jcam1; JAM; JAM-A; AA638916; JAM-1; Ly106; 9130004G24; Jcam; ESTM33
Mus musculus	Riken	ILMN_206887	ILMN_206887	LAMA4	ri|E030020B12|PX00205M04|AK087015|2571					AK087015	Lama4		ILMN_1258354	002490706	S	2441	GCCACACAAGCCTAACCTGAGTTTAGTCCTTAGAACTCATGTGGAGTGAG						A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184659	ILMN_259956	ZFP703	XM_912161.3	XM_912161.3		353310	149258634	XM_912161.3	Zfp703	XP_917254.3	ILMN_2420465	000380717	S	2592	GGACCCACACCTTGCGGTGCAGTCAAATTGCCGGCTGACAGGGACCTGAC				8qA2	PREDICTED: Mus musculus zinc finger protein 703 (Zfp703), mRNA.					
Mus musculus	RefSeq	ILMN_201107	ILMN_259956	ZFP703	XM_912161.3	XM_912161.3		353310	149258634	XM_912161.3	Zfp703	XP_917254.3	ILMN_1237247	004120228	S	1135	TTATGCCGTGACCCCTACTGTCTAGGAGGCTACCACAGCGCCTCGCACCT				8qA2	PREDICTED: Mus musculus zinc finger protein 703 (Zfp703), mRNA.					
Mus musculus	RefSeq	ILMN_190021	ILMN_259956	ZFP703	XM_912161.3	XM_912161.3		353310	149258634	XM_912161.3	Zfp703	XP_917254.3	ILMN_2466489	002570020	S	1963	GCATTAATGACCACATGAGTCAGTGGTATGCAAAAAGTCTGTCTCCCCCA				8qA2	PREDICTED: Mus musculus zinc finger protein 703 (Zfp703), mRNA.					
Mus musculus	Riken	ILMN_202207	ILMN_202207	1700121M19RIK	ri|1700121M19|ZX00078G17|AK007233|1011					AK007233	1700121M19Rik		ILMN_2547818	006220041	S	671	GCGGTTGAGGACACTTGCTCTGGTCACTGCTGGCATTTCTGGAATGTTCC										
Mus musculus	RefSeq	ILMN_192583	ILMN_227531	GNG12	NM_025278.4	NM_025278.4		14701	142363813	NM_025278.4	Gng12	NP_079554.1	ILMN_1248949	002030577	S	799	GTTCTTAATAATGTTTGTGCCAACCTATATCCCATGTAAGGGATCTGGGG	6	+	66967954-66968003	6qC1	Mus musculus guanine nucleotide binding protein (G protein), gamma 12 (Gng12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AA536815; AI842738; 2010305F15Rik; AI115529; AI314170	AA536815; AI842738; 2010305F15Rik; AI115529; AI314170
Mus musculus	Riken	ILMN_207341	ILMN_207341	TOLLIP-PENDING	ri|6530441F20|PX00649G06|AK078391|1101					AK078391	Tollip-pending		ILMN_1250600	004810086	S	879	GCAAGAACATTTTGGTACTCACACACACACCCTCCTCTCTCTTCAGGGTC										
Mus musculus	RefSeq	ILMN_200634	ILMN_200634	LOC384438	XM_357647.1	XM_357647.1			38084583	XM_357647.1	LOC384438		ILMN_1241121	003890129	S	341	AGGCCTTGAATAGACACTGTATGACGCTGTCAGATTGGGCAGGCTTAGTG										
Mus musculus	RefSeq	ILMN_214625	ILMN_214625	FOXJ3	NM_172699.2	NM_172699.2		230700	40254236	NM_172699.2	Foxj3	NP_766287.1	ILMN_2903484	001710441	S	4401	GTCTCAGACGTCCTTTGAAGTGGGAGGGGATCGATCTTGGGATAATTTCA	4	+	119301363-119301412	4qD2.1	Mus musculus forkhead box J3 (Foxj3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mKIAA1041; C330039G02Rik; DKFZp761E2211	mKIAA1041; C330039G02Rik; DKFZp761E2211
Mus musculus	RefSeq	ILMN_214625	ILMN_214625	FOXJ3	NM_172699.2	NM_172699.2		230700	40254236	NM_172699.2	Foxj3	NP_766287.1	ILMN_1218721	006560438	S	724	AGATTCAGATTCTTTGGGAATGGAGTGTATTATTTCGGGAAGTGCCTCTC	4	+	119282615-119282664	4qD2.1	Mus musculus forkhead box J3 (Foxj3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mKIAA1041; C330039G02Rik; DKFZp761E2211	mKIAA1041; C330039G02Rik; DKFZp761E2211
Mus musculus	RefSeq	ILMN_214625	ILMN_214625	FOXJ3	NM_172699.2	NM_172699.2		230700	40254236	NM_172699.2	Foxj3	NP_766287.1	ILMN_2650040	005490356	S	4692	CATTAGGATTGTCGCTGCCAGAATTGATATGCATGGATGGCACTTAAAAT	4	+	119301654-119301703	4qD2.1	Mus musculus forkhead box J3 (Foxj3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mKIAA1041; C330039G02Rik; DKFZp761E2211	mKIAA1041; C330039G02Rik; DKFZp761E2211
Mus musculus	RefSeq	ILMN_214625	ILMN_214625	FOXJ3	NM_172699.2	NM_172699.2		230700	40254236	NM_172699.2	Foxj3	NP_766287.1	ILMN_2729176	005090050	S	1734	TGGCCTTATCCACTCGCAGAGTAATGTTCCGCAGAATGTCTGTCACGGTG	4	+	119295928-119295977	4qD2.1	Mus musculus forkhead box J3 (Foxj3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mKIAA1041; C330039G02Rik; DKFZp761E2211	mKIAA1041; C330039G02Rik; DKFZp761E2211
Mus musculus	RefSeq	ILMN_214625	ILMN_214625	FOXJ3	NM_172699.2	NM_172699.2		230700	40254236	NM_172699.2	Foxj3	NP_766287.1	ILMN_2688740	006590709	S	3126	GGTAACGCTAGCAGGGGCTGCATGCAGCTCCAGAGTCTTATCTGCTTCAG	4	+	119300088-119300137	4qD2.1	Mus musculus forkhead box J3 (Foxj3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mKIAA1041; C330039G02Rik; DKFZp761E2211	mKIAA1041; C330039G02Rik; DKFZp761E2211
Mus musculus	RefSeq	ILMN_214625	ILMN_214625	FOXJ3	NM_172699.2	NM_172699.2		230700	40254236	NM_172699.2	Foxj3	NP_766287.1	ILMN_2729171	002480497	S	1737	GCCTTATCCACTCGCAGAGTAATGTTCCGCAGAATGTCTGTCACGGTGCC	4	+	119295931-119295980	4qD2.1	Mus musculus forkhead box J3 (Foxj3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	mKIAA1041; C330039G02Rik; DKFZp761E2211	mKIAA1041; C330039G02Rik; DKFZp761E2211
Mus musculus	Riken	ILMN_206382	ILMN_206382	NDUFA6	ri|B230217P19|PX00070A22|AK080809|1142					AK080809	Ndufa6		ILMN_1217859	007320408	S	877	AGGCGTTTTCCAATGAGTAACAACAGCTCCACAGCACGCCTCAGCACTGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]			
Mus musculus	RefSeq	ILMN_223362	ILMN_223362	GAS2L1	NM_144560.2	NM_144560.2		78926	89357940	NM_144560.2	Gas2l1	NP_653146.1	ILMN_1227009	005960524	S	2400	GATGGACCGGCTTAGCTACACCCACACCCCATTCCATTTTCTTTGTGGCC	11	-	4960745-4960793:4960794-4960794	11qA1	Mus musculus growth arrest-specific 2 like 1 (Gas2l1), transcript variant beta, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		RP23-64E17.7; 4930500E24Rik; TU-71.1; GAR22; D0Jmb1	RP23-64E17.7; 4930500E24Rik; TU-71.1; GAR22; D0Jmb1
Mus musculus	RefSeq	ILMN_223362	ILMN_223362	GAS2L1	NM_144560.2	NM_144560.2		78926	89357940	NM_144560.2	Gas2l1	NP_653146.1	ILMN_3123759	004250709	A	2262	TGGACACACAACCAGACCGTAAACCCTCACGCATACCGACACCTCGGGGA	11	-	4960883-4960932	11qA1	Mus musculus growth arrest-specific 2 like 1 (Gas2l1), transcript variant beta, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		RP23-64E17.7; 4930500E24Rik; TU-71.1; GAR22; D0Jmb1	RP23-64E17.7; 4930500E24Rik; TU-71.1; GAR22; D0Jmb1
Mus musculus	RefSeq	ILMN_223362	ILMN_223362	GAS2L1	NM_144560.2	NM_144560.2		78926	89357940	NM_144560.2	Gas2l1	NP_653146.1	ILMN_3047914	001780243	I	248	TCAGTTTCCTCATCTGTAGAATGGAGACGCGGTCGCCGCTCAGCCTGTGG	11	-	4964886-4964935	11qA1	Mus musculus growth arrest-specific 2 like 1 (Gas2l1), transcript variant beta, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		RP23-64E17.7; 4930500E24Rik; TU-71.1; GAR22; D0Jmb1	RP23-64E17.7; 4930500E24Rik; TU-71.1; GAR22; D0Jmb1
Mus musculus	RefSeq	ILMN_200470	ILMN_200470	LOC384310	XM_357559.1	XM_357559.1			38082365	XM_357559.1	LOC384310		ILMN_1252213	006560088	S	436	GGGGACCCAGCTTCTAGACATGAACAGATTGGAGGGATACTTCACAGCTG										
Mus musculus	MEEBO	ILMN_213563	ILMN_213563	PSG23	scl0056868.1_103				19549328	NM_020261	Psg23		ILMN_2638367	001850086	S	1299	ACAGTGCATGTTCAAGTCAACATCTACAAGCTTGTGACACAGCCTGTCAT							The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]			
Mus musculus	RefSeq	ILMN_185474	ILMN_258672	AP4E1	NM_175550.3	NM_175550.3		108011	124487334	NM_175550.3	Ap4e1	NP_780759.2	ILMN_2427317	003420670	S	5877	CATTTAACTGTAGGTTCTTTTATTTTCTATGGCTAAACATGATCATTGTC	2	+	126894903-126894952	2qF1	Mus musculus adaptor-related protein complex AP-4, epsilon 1 (Ap4e1), mRNA. XM_925455 XM_925461 XM_991402 XM_991421 XM_991442 XM_991461	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9930028M04Rik; 2310033A20Rik; AV087807	9930028M04Rik; 2310033A20Rik; AV087807
Mus musculus	RefSeq	ILMN_195558	ILMN_258672	AP4E1	NM_175550.3	NM_175550.3		108011	124487334	NM_175550.3	Ap4e1	NP_780759.2	ILMN_2516654	006510161	S	3869	GCTTTGCACAGGTCAGGGTTAAGCTGAGGCGGCCTAACACACGCTAACCA	2	+	126892895-126892944	2qF1	Mus musculus adaptor-related protein complex AP-4, epsilon 1 (Ap4e1), mRNA. XM_925455 XM_925461 XM_991402 XM_991421 XM_991442 XM_991461	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9930028M04Rik; 2310033A20Rik; AV087807	9930028M04Rik; 2310033A20Rik; AV087807
Mus musculus	RefSeq	ILMN_236154	ILMN_236154	OTTMUSG00000000720	NM_001045535.1	NM_001045535.1		435350	113865894	NM_001045535.1	OTTMUSG00000000720	NP_001039000.1	ILMN_2803967	005340066	S	1045	GACTCAGCGGTGCTTAATTGCTGACCGTCCATTCCTTTTCCTCATTCAAG	13	-	33924377-33924426	13qA3.3	Mus musculus predicted gene, OTTMUSG00000000720 (OTTMUSG00000000720), mRNA. XM_972823					
Mus musculus	Riken	ILMN_206706	ILMN_206706	E030033D05RIK	ri|E030033D05|PX00318I22|AK087191|1629					AK087191	E030033D05Rik		ILMN_1230596	006940039	S	1479	CAGTGGGTGAGGGCTGGCTGCTGTGTCTGGTTCCCTGCATTTGACTCTCA										
Mus musculus	RefSeq	ILMN_228041	ILMN_228041	EG244595	NM_001013764.1	NM_001013764.1		244595	85701457	NM_001013764.1	EG244595	NP_001013786.1	ILMN_2784942	001410356	S	1664	TCGGAGCCACCACCCAGCAAGCCCAGAGGCTCAAAGACAAGGAAGTAGCT	8	-	95544379-95544428	8qC5	Mus musculus predicted gene, EG244595 (EG244595), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC102259	MGC102259
Mus musculus	RefSeq	ILMN_207521	ILMN_207521	2310047C04RIK	XM_148605.2	XM_148605.2			28494006	XM_148605.2	2310047C04Rik		ILMN_2587957	004880767	I	22	ACTGCAGTCGGTGATTGGCAGGGTGGGCCTGGGTTCCAGGCGCTGGGGTT										
Mus musculus	RefSeq	ILMN_210863	ILMN_210863	SUDS3	NM_178622.3	NM_178622.3		71954	31581562	NM_178622.3	Suds3	NP_848737.2	ILMN_2609948	005360064	S	2268	GCCTCCACGGAAGACTGTACAGAATCACTTTGTTTATGGCCGCTCTCCCA	5	-	117541731-117541780	5qF	Mus musculus suppressor of defective silencing 3 homolog (S. cerevisiae) (Suds3), mRNA.	A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins [goid 16580] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Interacting selectively with the enzyme histone deacetylase [goid 42826] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	mSds3; AU067672; 2400003N08Rik	mSds3; AU067672; 2400003N08Rik
Mus musculus	RefSeq	ILMN_200744	ILMN_249153	EG665582	XR_002292.1	XR_002292.1		665582	94379382	XR_002292.1	EG665582		ILMN_1243060	002120273	S	2423	GCTGTGGAGATCTTCTCCATCTTGGTATCCAGTGCAGGGATCCTTGGATG	7	+	9727982-9728031	7qA1	PREDICTED: Mus musculus predicted gene, EG665582 (EG665582), misc RNA.					
Mus musculus	RefSeq	ILMN_209814	ILMN_209814	ELK4	NM_007923.2	NM_007923.2		13714	153792361	NM_007923.2	Elk4	NP_031949.2	ILMN_1234710	002600154	S	487	CGCAAGAACAAGCCTAATATGAATTATGATAAACTCAGCCGAGCCCTGCG				1qE4	Mus musculus ELK4, member of ETS oncogene family (Elk4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	A130026I01Rik; 2310011G17Rik; Sap1; BB162516	A130026I01Rik; 2310011G17Rik; Sap1; BB162516
Mus musculus	RefSeq	ILMN_209814	ILMN_209814	ELK4	NM_007923.2	NM_007923.2		13714	153792361	NM_007923.2	Elk4	NP_031949.2	ILMN_1231726	005910382	S	1433	TGCTGACTCCGAGCCCCTTGCTCTCCAGCATCCACTTTTGGAGCACTCTC				1qE4	Mus musculus ELK4, member of ETS oncogene family (Elk4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	A130026I01Rik; 2310011G17Rik; Sap1; BB162516	A130026I01Rik; 2310011G17Rik; Sap1; BB162516
Mus musculus	RefSeq	ILMN_223331	ILMN_223331	ENPP6	NM_177304.3	NM_177304.3		320981	142368620	NM_177304.3	Enpp6	NP_796278.1	ILMN_2766894	007000519	S	2954	AGACAAAACATCAGCTCTCAGGAGGAGGAAGCCTTTATTTGGTGCTTGCC	8	+	48180138-48180187	8qB1.1	Mus musculus ectonucleotide pyrophosphatase/phosphodiesterase 6 (Enpp6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 19695] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IDA]	B830047L21Rik; 4833421B01Rik; D8Ertd514e; Npp6	B830047L21Rik; 4833421B01Rik; D8Ertd514e; Npp6
Mus musculus	RefSeq	ILMN_247452	ILMN_247452	OLFR1037	NM_001011532.1	NM_001011532.1		259151	58372135	NM_001011532.1	Olfr1037	NP_001011532.1	ILMN_3162036	003120114	S	777	TCTGCAGCCAAAATCAAGCCACTCTCTCGACACAGACAAAATGGCCTCAG	2	-	85925106-85925155	2qD	Mus musculus olfactory receptor 1037 (Olfr1037), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-34P; MOR171-52	MOR256-34P; MOR171-52
Mus musculus	MEEBO	ILMN_192230	ILMN_192230	9430030N17RIK	scl6173.1.1_41						9430030N17Rik		ILMN_2486163	000160180	S	20	AAGGAATGAATGCGAGCCCAACACTAGGCTGTGGTCCTGGCGGTTCCCAC										
Mus musculus	RefSeq	ILMN_188912	ILMN_247839	CLTC	NM_001003908.1	NM_001003908.1		67300	51491844	NM_001003908.1	Cltc	NP_001003908.1	ILMN_2456776	001170152	S	4741	ATCTCTTCAAAGGCAACAATCGCTGGAAACAGAGTGTAGAGTTGTGCAAG	11	-	86516120-86516169	11qC	Mus musculus clathrin, heavy polypeptide (Hc) (Cltc), mRNA.	Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex [goid 30132] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC92975; R74732; 3110065L21Rik	MGC92975; R74732; 3110065L21Rik
Mus musculus	RefSeq	ILMN_222266	ILMN_222266	S1PR1	NM_007901.4	NM_007901.4		13609	142384665	NM_007901.4	S1pr1	NP_031927.2	ILMN_2747124	006940463	S	2819	GTCACTAGGTATTGATGATGGTTATAAATGTTACAGAGAATAAAAATATA	3	-	115413503-115413552	3qG1	Mus musculus sphingosine-1-phosphate receptor 1 (S1pr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IEA]	lpB1; AI849002; IpB1; S1P1	lpB1; AI849002; IpB1; S1P1
Mus musculus	RefSeq	ILMN_221460	ILMN_221460	CHRNA5	NM_176844.3	NM_176844.3		110835	46559779	NM_176844.3	Chrna5	NP_789814.2	ILMN_2735905	002030440	S	1089	GGAGGCCGCGCTCGATTGCATTCGCTACATCACGAGACACGTAGTGAAAG	9	+	54852900-54852949	9qB	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 5 (Chrna5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IPI]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]	Acra-5; Acra5; MGC124059; MGC124168	Acra-5; Acra5; MGC124059; MGC124168
Mus musculus	RefSeq	ILMN_233569	ILMN_233569	A030010K20RIK	NM_001048196.1	NM_001048196.1		665891	114796651	NM_001048196.1	A030010K20Rik	NP_001041661.1	ILMN_2937333	007320386	S	443	GCCCCTGTTGCTGTCTGAGACCAGTCTGTGGTCAGGTCTGCTGCCAAACC	11	-	99489061-99489110	11qD	Mus musculus RIKEN cDNA A030010K20 gene (A030010K20Rik), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	MEEBO	ILMN_190617	ILMN_190617	1700104B16RIK	scl34945.2.1_130						1700104B16Rik		ILMN_2471770	004040164	S	20	CCCTATTTTCTATCAGTGGCCATTTTCCCGTTTCTTGTAGACAGTCCTGG										
Mus musculus	RefSeq	ILMN_201444	ILMN_201444	LOC385172	XM_358101.1	XM_358101.1			38093898	XM_358101.1	LOC385172		ILMN_1234499	000380274	S	196	CACAGTGAGTCTTGGCAGAGTTGGGGAAATTCTGGAACAGTGTCTTCTGG										
Mus musculus	RefSeq	ILMN_214685	ILMN_214685	PEX14	NM_019781.2	NM_019781.2		56273	133891785	NM_019781.2	Pex14	NP_062755.1	ILMN_2650751	000830554	S	1825	CAGCCATGTCTGACCTTCCCACTGAGAAACACATGTTCATTTATGTGATC	4	-	148335461-148335510	4qE2	Mus musculus peroxisomal biogenesis factor 14 (Pex14), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence ISO]	The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		R75137; Pex14p	R75137; Pex14p
Mus musculus	MEEBO	ILMN_224086	ILMN_224086	RWDD2	scl36646.3.1_24				21312303	NM_027100	Rwdd2		ILMN_2774528	000380553	S	485	CAGCTGCTGCTTAACCAAGCTCTCAGTGCTTATCTCGGGACTTTCGACCC										
Mus musculus	RefSeq	ILMN_193899	ILMN_193899	UGP2	NM_139297.4	NM_139297.4		216558	146149343	NM_139297.4	Ugp2	NP_647458.1	ILMN_1244631	007200431	S	2335	GTGTTCATCTGGTTCTAGACCTGGGATACCTGCCGTGCTGTACACATTTC				11qA3.1	Mus musculus UDP-glucose pyrophosphorylase 2 (Ugp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose [goid 3983] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC38262	MGC38262
Mus musculus	RefSeq	ILMN_222770	ILMN_222770	FOXJ1	NM_008240.2	NM_008240.2		15223	52345414	NM_008240.2	Foxj1	NP_032266.2	ILMN_2754453	005870215	S	2249	AAGAGCATCAGGAAGATGGGGTGTGGGGTGGTTGGGTCAGGGGCAGCCAA	11	-	116192290-116192339	11qE2	Mus musculus forkhead box J1 (Foxj1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that initiates the activity of an inactive GTPase of the Rho family through the replacement of GDP by GTP [goid 32862] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of germinal center formation [goid 2635] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45409] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IMP]; Tolerance induction in the central lymphoid organs: the thymus and bone marrow [goid 2508] [evidence IMP]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; An immune response mediated through a body fluid [goid 6959] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of central B cell tolerance induction [goid 2897] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2924] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of B cell activation [goid 50869] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The specification and formation of the polarity of a cell along its apical/basal axis [goid 35089] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell differentiation in the thymus [goid 33085] [evidence IMP]; Any process that decreases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10553] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HFH-4; FKHL-13; Hfh4	HFH-4; FKHL-13; Hfh4
Mus musculus	MEEBO	ILMN_222208	ILMN_222208	NPR1	scl018160.1_34	NM_008727.4			34328513	NM_008727.4	Npr1		ILMN_2746305	004880746	S	3692	GGGGGACTCCTAAGTTTATAGGGCTGACTGAAATACCCAGTCACTCCCGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IDA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IMP]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA];  [goid 16849] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217098	ILMN_217098	D14ERTD171E	scl46522.28_243	NM_177814.3			37360976	NM_177814.3	D14Ertd171e		ILMN_1244989	005220458	S	5726	GTGTAGAGCGCCGTTTGAATGCTGCCAAGGGTCCCTGTATCTAATTCCCC										
Mus musculus	MEEBO	ILMN_218251	ILMN_218251	2310004N24RIK	scl40710.6.1_96	XM_181318.4			38091983	XM_181318.4	2310004N24Rik		ILMN_2693587	003170403	S	663	GAAGAGGCAGCAGCCAATAGGAGACGCCAGCACCTTGCAAACCCCTACAC										
Mus musculus	Riken	ILMN_206702	ILMN_206702	A930039A15RIK	ri|A930039A15|PX00316F14|AK080751|644					AK080751	A930039A15Rik		ILMN_1238170	007610341	S	226	GCATCGAGACTTCGGGATGTGCATTTACCCTGCCTGCACATGCGTGGAGT										
Mus musculus	RefSeq	ILMN_211880	ILMN_211880	4930507C10RIK	NM_030175.3	NM_030175.3		78772	146149307	NM_030175.3	4930507C10Rik	NP_084451.1	ILMN_2620374	002630064	S	2019	GAGAATGCTTCACTGAGTGCATAATGCTGTCCATTCTGAGTCTGGGACTC					Mus musculus RIKEN cDNA 4930507C10 gene (4930507C10Rik), mRNA.				AW208802	AW208802
Mus musculus	RefSeq	ILMN_189553	ILMN_233119	TULP3	NM_011657.2	NM_011657.2		22158	125490352	NM_011657.2	Tulp3	NP_035787.1	ILMN_2462332	000540427	S	2891	CTGAACTTAAGAATTCAAAAACTTTGGGTCTACATTCAGTGGTCCCCCAC	6	-	128271612-128271661	6qF3	Mus musculus tubby-like protein 3 (Tulp3), mRNA.				AI316887; 2310022L06Rik	AI316887; 2310022L06Rik
Mus musculus	RefSeq	ILMN_208727	ILMN_208727	GPRC6A	NM_153071.1	NM_153071.1		210198	23346474	NM_153071.1	Gprc6a	NP_694711.1	ILMN_2588955	004010603	S	2734	CAAGTGCTCCCACACACAGGCACGGCAAAGACTATCAAAGCGTCTAAAAC	10	-	51334701-51334750	10qB3	Mus musculus G protein-coupled receptor, family C, group 6, member A (Gprc6a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC124360	MGC124360
Mus musculus	MEEBO	ILMN_209267	ILMN_209267	2510040D07RIK	scl36514.13.4_62	XM_135092.3			38090078	XM_135092.3	2510040D07Rik		ILMN_2594165	002760494	S	1620	CAGTGATTGGGGGGACAGCAGGCCAGGGATTTGTATGGGGACTTGAGTAA										
Mus musculus	RefSeq	ILMN_197551	ILMN_197551	LOC242025	XM_143236.3	XM_143236.3			38076532	XM_143236.3	LOC242025		ILMN_1249626	003190424	S	515	CATGCACCACTGTTGCCTTCACACAGTCTGTGGCTCGCATTGCCAAGCTG										
Mus musculus	RefSeq	ILMN_211458	ILMN_211458	4932418E24RIK	NM_177841.3	NM_177841.3		329366	142351965	NM_177841.3	4932418E24Rik	NP_808509.1	ILMN_2616111	002070202	S	2925	AAAAAAGGAAGGCTTGGTAACGCCCTGGACCACCCGGAGCTGCGGTAAGG	2	-	26127339-26127388	2qA3	Mus musculus RIKEN cDNA 4932418E24 gene (4932418E24Rik), mRNA.				RP23-297I16.4	RP23-297I16.4
Mus musculus	RefSeq	ILMN_220537	ILMN_220537	DAG1	NM_010017.3	NM_010017.3		13138	145966710	NM_010017.3	Dag1	NP_034147.1	ILMN_2724585	002030546	S	4325	GGAGGAGTGCCAGCAATAGTTCATAGTAAAAGTCTGTGGGCTCTCAAAGC				9qF2	Mus musculus dystroglycan 1 (Dag1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; A protein complex that includes alpha- and beta-dystroglycan, which are alternative products of the same gene; the laminin-binding component of the dystrophin-associated glycoprotein complex, providing a link between the subsarcolemmal cytoskeleton (in muscle cells) and the extracellular matrix. Alpha-dystroglycan is an extracellular protein binding to alpha-laminin and to beta-dystroglycan; beta-dystroglycan is a transmembrane protein which binds alpha-dystroglycan and dystrophin [goid 16011] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Dp71; DG; D9Wsu13e; Dp427	Dp71; DG; D9Wsu13e; Dp427
Mus musculus	RefSeq	ILMN_197730	ILMN_197730	LOC239559	XM_139501.2	XM_139501.2			38077653	XM_139501.2	LOC239559		ILMN_2529168	005720653	S	1059	GAAGTGGTGTTCCATCCAAAGCCTGGAAAAGAGCCATGCTTGCCGTGGGG										
Mus musculus	RefSeq	ILMN_199411	ILMN_199411	OLFR1436	NM_146687.1	NM_146687.1		258682	33239091	NM_146687.1	Olfr1436	NP_666898.1	ILMN_2919869	006450097	S	464	CTGGATTTATAGGTTCTGTATCTCAGGTGTTTGCCATGCTGCAGCTCCAC	19	-	12373107-12373156	19qA	Mus musculus olfactory receptor 1436 (Olfr1436), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR214-2	MOR214-2
Mus musculus	RefSeq	ILMN_199411	ILMN_199411	OLFR1436	NM_146687.1	NM_146687.1		258682	33239091	NM_146687.1	Olfr1436	NP_666898.1	ILMN_2766534	001820255	S	557	CCAGTTGTTAAATCTATCCTGCACTGACACTTTTTTTGCACACGTAGAGC	19	-	12373014-12373063	19qA	Mus musculus olfactory receptor 1436 (Olfr1436), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR214-2	MOR214-2
Mus musculus	RefSeq	ILMN_199411	ILMN_199411	OLFR1436	NM_146687.1	NM_146687.1		258682	33239091	NM_146687.1	Olfr1436	NP_666898.1	ILMN_2639092	004290332	S	436	GCTCGGATGGTGATGGGAAGCTACACAGCTGGATTTATAGGTTCTGTATC	19	-	12373135-12373184	19qA	Mus musculus olfactory receptor 1436 (Olfr1436), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR214-2	MOR214-2
Mus musculus	RefSeq	ILMN_195409	ILMN_195409	ZFP57	NM_009559.2	NM_009559.2		22715	34328160	NM_009559.2	Zfp57	NP_033585.2	ILMN_1221161	006550215	S	1508	GGGAAAGGAGAGCCTGCTGGATCACTTGTGCTGCCAAAGACCAATCAGAT	17	+	37147169-37147218	17qB1	Mus musculus zinc finger protein 57 (Zfp57), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	G19; Zfp-57	G19; Zfp-57
Mus musculus	RefSeq	ILMN_222891	ILMN_222891	PLEKHG6	NM_198604.1	NM_198604.1		213522	38348453	NM_198604.1	Plekhg6	NP_941006.1	ILMN_2756291	004810224	S	2732	AGGCTGACTCTAGCCCAGCTGCAGAGAATGAGGGTCCCCCACATCATACA	6	-	125313080-125313129	6qF3	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 6 (Plekhg6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	Gm155; MGC30363; BC026778	Gm155; MGC30363; BC026778
Mus musculus	MEEBO	ILMN_220831	ILMN_220831	D130065D13	scl27808.4.1_167				51827431	XM_485609	D130065D13		ILMN_2727464	002190646	S	2537	AAGGACATCTTTATAAATACGTGAAGCTGATGTAAGCATAGACTGCCACG										
Mus musculus	RefSeq	ILMN_217603	ILMN_217603	BCL7B	NM_009745.1	NM_009745.1		12054	6753173	NM_009745.1	Bcl7b	NP_033875.1	ILMN_2685390	000050689	S	630	TCCTGGCCCCTCGCCTCCTGGCCCCTGCCTCTATTTATTGCATTCTGGTC	5	+	135656806-135656855	5qG2	Mus musculus B-cell CLL/lymphoma 7B (Bcl7b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_217603	ILMN_217603	BCL7B	NM_009745.1	NM_009745.1		12054	6753173	NM_009745.1	Bcl7b	NP_033875.1	ILMN_2758131	001580544	S	1452	GGAAATGGGTAACAGCAAGTGAAGACCTATTTTAGCACTGAATAGAGTAT	5	+	135657628-135657677	5qG2	Mus musculus B-cell CLL/lymphoma 7B (Bcl7b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_197047	ILMN_197047	LOC209112	XM_149003.2	XM_149003.2			38073645	XM_149003.2	LOC209112		ILMN_1253004	004230241	S	292	TCTCATCCTTCATTGCTCAAGGACCCATCCTGGACATGTCAGCCGTGGCC										
Mus musculus	RefSeq	ILMN_196277	ILMN_250649	1500001M20RIK	NM_026894.1	NM_026894.1		68971	76559943	NM_026894.1	1500001M20Rik	NP_081170.1	ILMN_2523256	003390152	S	1080	AGGGTGGATGAGAAAAGCGTCCTGACTTGACTGATGTTGTGTTACGTGTA	6	-	114954435-114954460:114954461-114954484	6qE3	Mus musculus RIKEN cDNA 1500001M20 gene (1500001M20Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_250649	ILMN_250649	1500001M20RIK	NM_026894.1	NM_026894.1		68971	76559943	NM_026894.1	1500001M20Rik	NP_081170.1	ILMN_2984793	000450681	S	980	TCAGACCTTCCAGCATCAGGCAGAGCACTAAAGGCCTTTTTACTGCTGGT	6	-	114954535-114954537:114960825-114960871	6qE3	Mus musculus RIKEN cDNA 1500001M20 gene (1500001M20Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_196277	ILMN_250649	1500001M20RIK	NM_026894.1	NM_026894.1		68971	76559943	NM_026894.1	1500001M20Rik	NP_081170.1	ILMN_1258543	003870041	S	841	CTGCCCAGAACCCTACAGCAGCAAATCAATCACATCATGGACCCTCCTGG	6	-	114962249-114962298	6qE3	Mus musculus RIKEN cDNA 1500001M20 gene (1500001M20Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	MEEBO	ILMN_184341	ILMN_184341	ATP8B4	scl18721.23.1_208				51706380	XM_141343	Atp8b4		ILMN_1229383	005310066	S	20	GGTGGTCAGAATTGTGAGCGCTTATGAGAGGTGGCATGCTTGGCTGTTTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218377	ILMN_218377	PCSK7	NM_008794.2	NM_008794.2		18554	112181189	NM_008794.2	Pcsk7	NP_032820.2	ILMN_2694962	005900538	S	3585	ACCTGTCTTCCTCTGCACCGTGCTCAGGGAAATGGCCTTCATTCCAGAGG	9	+	45737576-45737625	9qA5.2	Mus musculus proprotein convertase subtilisin/kexin type 7 (Pcsk7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	SPC7; AA959856	SPC7; AA959856
Mus musculus	Riken	ILMN_205646	ILMN_205646	SLC7A11	ri|A130021E01|PX00121B24|AK037490|3163					AK037490	Slc7a11		ILMN_2574165	006650563	S	3029	GGTTGTACAAGCTTGCAATCCCATTCTGGGACATGTTGCTCATCAAGGGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222995	ILMN_222995	AP4B1	NM_026193.1	NM_026193.1		67489	13385705	NM_026193.1	Ap4b1	NP_080469.1	ILMN_2757861	000510594	S	2456	GGCAAGGACTGAATCCCTGCATGGTTTTGTTTCTGTCCTGGAAACTGTGA	3	+	103618867-103618916	3qF2.2	Mus musculus adaptor-related protein complex AP-4, beta 1 (Ap4b1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1810038H16Rik; AV004952; Ap4b4	1810038H16Rik; AV004952; Ap4b4
Mus musculus	Riken	ILMN_203383	ILMN_203383	4921514E18RIK	ri|4921514E18|PX00014C18|AK029530|2303					AK029530	4921514E18Rik		ILMN_1216117	002600497	S	2011	GTTGTGCAGTGATGTCCTGAGGCAGGCCCTGTTGCTGTATCTGTCCTACC										
Mus musculus	MEEBO	ILMN_188869	ILMN_188869	SCL000163.1_1	scl000163.1_1	BC030943.1			22658298	BC030943.1	scl000163.1_1		ILMN_2456438	002470504	S	10	CTCCCTTGTGCGCTCCATAGAGGTGTTGAAAATGCTCCTTTTTCCACTGG										
Mus musculus	MEEBO	ILMN_186374	ILMN_186374	1810011O10RIK	scl35010.1.1_22				21312199	NM_026931	1810011O10Rik		ILMN_1240968	000270241	S	1	TGTGGGTCATTATAACATTAATATCTCTCTCCTTATTCCAGTATAATTTA							A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]			
Mus musculus	RefSeq	ILMN_227601	ILMN_227601	GM1082	NM_001004161.1	NM_001004161.1		381868	51921316	NM_001004161.1	Gm1082	NP_001004161.1	ILMN_2995263	003800403	S	2289	CCTGCAGAAACCTGCTAGTGAGGATCTCGAGCTGACAGAAGGCAGTCTCT	7	+	31306853-31306902	7qB1	Mus musculus gene model 1082, (NCBI) (Gm1082), mRNA.					
Mus musculus	RefSeq	ILMN_200797	ILMN_227601	GM1082	NM_001004161.1	NM_001004161.1		381868	51921316	NM_001004161.1	Gm1082	NP_001004161.1	ILMN_1216948	000240639	S	409	TGGTCCAGAGTGGGGAGTTGGCCCCCAGTGTGTCCTTGAGTCAGTTGCAA	7	+	31304039-31304088	7qB1	Mus musculus gene model 1082, (NCBI) (Gm1082), mRNA.					
Mus musculus	RefSeq	ILMN_194949	ILMN_317304	2900016B01RIK	XM_001474596.1	XM_001474596.1		67262	149258369	XM_001474596.1	2900016B01Rik	XP_001474646.1	ILMN_1256701	005270072	S	249	ACTCGCCCATAGGTGGAGTGGTTTCCTAGGTGATCCGTGTGGGCTTGAAG	8	+	15026766-15026815	8qA1.1	PREDICTED: Mus musculus RIKEN cDNA 2900016B01 gene (2900016B01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199731	ILMN_199731	LOC383885	XM_357310.1	XM_357310.1			38076657	XM_357310.1	LOC383885		ILMN_1230810	003460661	S	230	GCCCCTGGATTGATAGCAAAGGTGCTATATTCCCTGGACCAGATGAGAGC										
Mus musculus	RefSeq	ILMN_200515	ILMN_221381	BRD2	NM_010238.3	NM_010238.3		14312	100913022	NM_010238.3	Brd2	NP_034368.2	ILMN_1230000	003460288	S	10	TGGCGCCGACTCCCTGCCTCCCCAGGGACTCCCTAAGCTCCCTTTGTGTC	17	-	34258814-34258863	17qB1	Mus musculus bromodomain containing 2 (Brd2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			mKIAA4005; Rnf3; AW228947; KIAA4005; Fsrg1; NAT; Ring3; Frg-1; D17H6S113E	mKIAA4005; Rnf3; AW228947; KIAA4005; Fsrg1; NAT; Ring3; Frg-1; D17H6S113E
Mus musculus	RefSeq	ILMN_221381	ILMN_221381	BRD2	NM_010238.3	NM_010238.3		14312	100913022	NM_010238.3	Brd2	NP_034368.2	ILMN_3154409	002710259	A	4243	ATTTAAGCTATGTGGTAAGGCTGGGGGTGTGTAGCCGTGGTCCTCCCTCC	17	-	34252692-34252702:34252613-34252651	17qB1	Mus musculus bromodomain containing 2 (Brd2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			mKIAA4005; Rnf3; AW228947; KIAA4005; Fsrg1; NAT; Ring3; Frg-1; D17H6S113E	mKIAA4005; Rnf3; AW228947; KIAA4005; Fsrg1; NAT; Ring3; Frg-1; D17H6S113E
Mus musculus	MEEBO	ILMN_220623	ILMN_220623	SBK	scl0104175.6_273	NM_145587.1			21704179	NM_145587.1	Sbk		ILMN_2724545	000060639	S	3992	CCTACCCCATGTGTTTGTAAATACTCTGGCTTCCTTTGGCCCTGAGGAGG										
Mus musculus	MEEBO	ILMN_186869	ILMN_186869	IGHV1S31_X02463_IG_HEAVY_VARIABLE_1S31_40	IGHV1S31_X02463_Ig_heavy_variable_1S31_40						IGHV1S31_X02463_Ig_heavy_variable_1S31_40		ILMN_1224026	001660239	S	13	CCTGCAAGGCTTCTGGCTACACCTTCACAAGCTACTATATACACTGGGTG										
Mus musculus	RefSeq	ILMN_251788	ILMN_251788	CXCL12	NM_001012477.1	NM_001012477.1		20315	60279261	NM_001012477.1	Cxcl12	NP_001012495.1	ILMN_3158250	000020088	A	188	GCCGGTTCTTCGAGAGCCACATCGCCAGAGCCAACGTCAAGCATCTGAAA	6	+	117121533-117121582	6qF1	Mus musculus chemokine (C-X-C motif) ligand 12 (Cxcl12), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IDA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	TPAR1; TLSF; Sdf1b; SDF-1; AI174028; Sdf1a; TLSF-b; PBSF/SDF-1; Sdf1; TLSF-a; PBSF; Scyb12	TPAR1; TLSF; Sdf1b; SDF-1; AI174028; Sdf1a; TLSF-b; PBSF/SDF-1; Sdf1; TLSF-a; PBSF; Scyb12
Mus musculus	RefSeq	ILMN_251788	ILMN_251788	CXCL12	NM_001012477.1	NM_001012477.1		20315	60279261	NM_001012477.1	Cxcl12	NP_001012495.1	ILMN_3078973	001470148	I	2723	CTCGGAAGGAAGATCGGTGGCTGCGAGCTGAACTAAGGAGTAGGGCCTGT	6	+	117128467-117128516	6qF1	Mus musculus chemokine (C-X-C motif) ligand 12 (Cxcl12), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IDA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	TPAR1; TLSF; Sdf1b; SDF-1; AI174028; Sdf1a; TLSF-b; PBSF/SDF-1; Sdf1; TLSF-a; PBSF; Scyb12	TPAR1; TLSF; Sdf1b; SDF-1; AI174028; Sdf1a; TLSF-b; PBSF/SDF-1; Sdf1; TLSF-a; PBSF; Scyb12
Mus musculus	RefSeq	ILMN_217356	ILMN_217356	C1GALT1C1	NM_021550.2	NM_021550.2		59048	31982687	NM_021550.2	C1galt1c1	NP_067525.1	ILMN_2682271	005560193	S	1193	CCCATTGAAGTCTGCTTGTACAATGTCAAATGGAATGCTGTTTTTCCCTT	X	-	35984190-35984239	XqA3.3	Mus musculus C1GALT1-specific chaperone 1 (C1galt1c1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C81205; 1500002I11Rik; AB030184	C81205; 1500002I11Rik; AB030184
Mus musculus	RefSeq	ILMN_214525	ILMN_214525	IFIH1	NM_027835.1	NM_027835.1		71586	23956207	NM_027835.1	Ifih1	NP_082111.1	ILMN_2648913	004880377	S	3382	CTACACTACTGAGCTAACTCTAGAATATGTAGAGGATGCTTTTGTTTGGC	2	-	62435846-62435895	2qC1.3	Mus musculus interferon induced with helicase C domain 1 (Ifih1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MDA5; MDA-5; 9130009C22Rik; Helicard; MGC90959; Hlcd	MDA5; MDA-5; 9130009C22Rik; Helicard; MGC90959; Hlcd
Mus musculus	RefSeq	ILMN_224193	ILMN_260376	RPS6KA1	NM_009097.3	NM_009097.3		20111	146149198	NM_009097.3	Rps6ka1	NP_033123.1	ILMN_2776327	004280719	S	2647	TTGGGGCCCTCTCCGCTGTTGGCCGTGGGGCCATCTGCACATGACTTCGA				4qD3	Mus musculus ribosomal protein S6 kinase polypeptide 1 (Rps6ka1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	rsk; Rsk1; p90rsk	rsk; Rsk1; p90rsk
Mus musculus	Riken	ILMN_202744	ILMN_202744	E130209G04RIK	ri|E130209G04|PX00092B18|AK021406|1088					AK021406	E130209G04Rik		ILMN_2551945	005420561	S	755	CGCGCGTTCTATCCCGGAGGTTCTAATGCCTTGTCATCCTGGCACTAGTC										
Mus musculus	Riken	ILMN_207174	ILMN_207174	F830018F18RIK	ri|F830018F18|PL00005L24|AK089775|3149					AK089775	F830018F18Rik		ILMN_2585604	000830487	S	3000	CAGACCCCAAGGGTCAGAGCTGGCTGGACATCTAGAGAAGAGGAGCGGGC										
Mus musculus	Riken	ILMN_206270	ILMN_206270	D130004I16RIK	ri|D130004I16|PX00181H20|AK083762|618					AK083762	D130004I16Rik		ILMN_1257627	007160170	S	457	GGTTTTACTTAGAAATCCAAGGTTTGGGTAAGACTCCCCCTCCCCACCCC										
Mus musculus	RefSeq	ILMN_200026	ILMN_200026	LOC383124	XM_356889.1	XM_356889.1			38079902	XM_356889.1	LOC383124		ILMN_1237741	002340762	S	28	GCTGCCAGAGTGGAGTCTCATTTTTCTGAGATTGGGGACAAGAAGGCTCC										
Mus musculus	RefSeq	ILMN_215060	ILMN_215060	RNASE9	NM_183032.2	NM_183032.2		328401	118200344	NM_183032.2	Rnase9	NP_898853.2	ILMN_1219190	002940682	S	1114	GCTTTCTGAAGATCATCCAAATTTTCATGTGATTTTCCTGGTTCAGCATG	14	-	51658157-51658206	14qC1	Mus musculus ribonuclease, RNase A family, 9 (non-active) (Rnase9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	ESRL; MGC130132	ESRL; MGC130132
Mus musculus	MEEBO	ILMN_222679	ILMN_222679	GTL7	scl20414.10.1_11	XM_283757.2			38075622	XM_283757.2	Gtl7		ILMN_2753314	004250392	S	1230	ACGGGTGTTGTGGAAACTGCCAAAGTTTACCAGCTGGGTGGCACCAGAAC										
Mus musculus	Riken	ILMN_202452	ILMN_202452	4930557M22RIK	ri|4930557M22|PX00035D16|AK016166|1703					AK016166	4930557M22Rik		ILMN_1242787	004730082	S	1467	AAAGATTTCAGCCTGCGTTGGGGGGCTCTGGGTCTTGGGCATCCGTGTCT										
Mus musculus	Riken	ILMN_205316	ILMN_205316	STXBP3	ri|C730030N09|PX00087C09|AK050247|1794					AK050247	Stxbp3		ILMN_1245393	003890301	S	1658	GCTGAGCATGTGACTCCGGCAAGCCTTCAATTCCAGCTCTTGGGAGGCAG										
Mus musculus	RefSeq	ILMN_212443	ILMN_212443	SPRR2D	NM_011470.1	NM_011470.1		20758	6755631	NM_011470.1	Sprr2d	NP_035600.1	ILMN_2626516	006200392	S	531	GTATCCCAGGTGCTCAGTGGGAACTATAGCTGCTATCTATCCTGTGCCCT	3	+	92144663-92144712	3qF1	Mus musculus small proline-rich protein 2D (Sprr2d), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence NAS]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218146	ILMN_218146	OLFR137	NM_146488.1	NM_146488.1		258481	33238947	NM_146488.1	Olfr137	NP_666699.1	ILMN_1241505	000150482	S	687	GCAATCAACCACTCGACTTCAGAAAGTTTTCGGGACCTGTGGAGCCCATC	17	-	38441668-38441717	17qB1	Mus musculus olfactory receptor 137 (Olfr137), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-18	MOR256-18
Mus musculus	MEEBO	ILMN_192261	ILMN_192261	9629812_535	9629812_535						9629812_535		ILMN_2486464	003710484	S	11	GGATTCTTATGGTGGTGCTTCCGTTTGTATATATTGCCGCTCGCGTGTTG										
Mus musculus	Riken	ILMN_203448	ILMN_203448	D230020C06RIK	ri|D230020C06|PX00093P01|AK051933|2623					AK051933	D230020C06Rik		ILMN_1223028	005360541	S	2402	CGTCGGTAAACCTGTTACTTGGTGTTGCATGTCCATAGTCTGCACTGTAG										
Mus musculus	RefSeq	ILMN_223176	ILMN_223176	CAMK2B	NM_007595.3	NM_007595.3		12323	142349559	NM_007595.3	Camk2b	NP_031621.2	ILMN_1236009	005670162	S	3799	AGGACACTCCTGCTCTAACTGGCTAGGTGTTCGCAGGTGGTGGCGTCGAC	11	-	5869821-5869870	11qA1	Mus musculus calcium/calmodulin-dependent protein kinase II, beta (Camk2b), mRNA.	An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	MGC90738; Camk2d	MGC90738; Camk2d
Mus musculus	RefSeq	ILMN_219749	ILMN_219749	CCNJ	NM_172839.3	NM_172839.3		240665	146198529	NM_172839.3	Ccnj	NP_766427.1	ILMN_1253193	005080066	S	3635	TGATGTGTGTAAAGGACTTAACCAGAGTCCACTAATAAACACTATTCAAG				19qC3	Mus musculus cyclin J (Ccnj), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			D430039C20Rik; MGC118445	D430039C20Rik; MGC118445
Mus musculus	RefSeq	ILMN_260376	ILMN_260376	RPS6KA1	NM_009097.1	NM_009097.1		20111	6677810	NM_009097.1	Rps6ka1	NP_033123.1	ILMN_2975718	005860356	S	2990	CCCCGGGCGATGAGGGCTTTTTCATTTCCTCCTCAGCTGGTAACTCAGGG	4	-	133119415-133119464	4qD3	Mus musculus ribosomal protein S6 kinase polypeptide 1 (Rps6ka1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	rsk; Rsk1; p90rsk	rsk; Rsk1; p90rsk
Mus musculus	RefSeq	ILMN_190792	ILMN_190792	VMN2R26	NM_019917.2	NM_019917.2		56552	119392100	NM_019917.2	Vmn2r26	NP_064301.2	ILMN_2473322	002750520	S	2210	CAGAGTTTGGTCAAATCATTCTCTGGTGTAACGAGGGGTCCACCCTTGCT	6	+	124011695-124011744	6qF2	Mus musculus vomeronasal 2, receptor 26 (Vmn2r26), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	V2R1	V2R1
Mus musculus	Riken	ILMN_201634	ILMN_201634	1110020C17RIK	ri|1110020C17|R000016B16|AK003851|1173					AK003851	1110020C17Rik		ILMN_1239348	002120646	S	834	CTGGTGAGATGGCTGCTACTTGTCTGAGAGGAGGGTGGGCTACCTGACAG										
Mus musculus	RefSeq	ILMN_210246	ILMN_210246	EG215472	NM_174999.2	NM_174999.2		215472	142374877	NM_174999.2	EG215472	NP_778164.1	ILMN_2603663	006400243	S	450	AACGGGAAAGATCAGAGGATGGAGTTTGGAGAGTACAAGACAGGTTCCTG	10	-	93756634-93756683	10qC2	Mus musculus predicted gene, EG215472 (EG215472), mRNA.				E130012K09	E130012K09
Mus musculus	RefSeq	ILMN_214291	ILMN_243525	SLC27A6	NM_001081072.1	NM_001081072.1		225579	124487284	NM_001081072.1	Slc27a6	NP_001074541.1	ILMN_1230314	002320470	S	2468	GAGGATTTACTCTGAAGCGAGATGGGGAAGCAGTGTTCAGCAGGCGATGC	18	+	58772393-58772442	18qD3	Mus musculus solute carrier family 27 (fatty acid transporter), member 6 (Slc27a6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence TAS]	Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence TAS]	VLCS-H1; FATP6; FACVL2; 4732438L20Rik	VLCS-H1; FATP6; FACVL2; 4732438L20Rik
Mus musculus	RefSeq	ILMN_192858	ILMN_256033	ACPL2	NM_153420.2	NM_153420.2		235534	118130104	NM_153420.2	Acpl2	NP_700469.1	ILMN_2609191	000650086	S	737	TCACATGTTGAAAGGATCCGGAGCCTCTTTTGAAAGCCCCTTAAATTCCC	9	-	96729402-96729451	9qE3.3	Mus musculus acid phosphatase-like 2 (Acpl2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	DKFZp434B2119; BB177120; 9430094M07Rik; C130099A20Rik; MGC38214	DKFZp434B2119; BB177120; 9430094M07Rik; C130099A20Rik; MGC38214
Mus musculus	RefSeq	ILMN_192858	ILMN_256033	ACPL2	NM_153420.2	NM_153420.2		235534	118130104	NM_153420.2	Acpl2	NP_700469.1	ILMN_1254634	007400328	S	2954	TGCAGCTAACGCCGTGGTTCCTGGGTTAACGGTGCTTGTTCGTTCCGCAG	9	-	96723878-96723927	9qE3.3	Mus musculus acid phosphatase-like 2 (Acpl2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	DKFZp434B2119; BB177120; 9430094M07Rik; C130099A20Rik; MGC38214	DKFZp434B2119; BB177120; 9430094M07Rik; C130099A20Rik; MGC38214
Mus musculus	RefSeq	ILMN_192858	ILMN_256033	ACPL2	NM_153420.2	NM_153420.2		235534	118130104	NM_153420.2	Acpl2	NP_700469.1	ILMN_2705056	006060630	S	77	TGGGCAAGGCTAGACACAGCAGTTGAGCTGAAGTCTCACCATGGAAGAAG	9	-	96761365-96761414	9qE3.3	Mus musculus acid phosphatase-like 2 (Acpl2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	DKFZp434B2119; BB177120; 9430094M07Rik; C130099A20Rik; MGC38214	DKFZp434B2119; BB177120; 9430094M07Rik; C130099A20Rik; MGC38214
Mus musculus	RefSeq	ILMN_220656	ILMN_220656	RSPRY1	NM_026274.3	NM_026274.3		67610	142386272	NM_026274.3	Rspry1	NP_080550.2	ILMN_1238609	005080398	S	3300	TGAATTGTTGACTCTGTCTTCATCAAAAGTGTTTTATATCCCTCTCAGGG	8	+	97183666-97183715	8qC5	Mus musculus ring finger and SPRY domain containing 1 (Rspry1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI608258; 4930470D19Rik	AI608258; 4930470D19Rik
Mus musculus	Riken	ILMN_203654	ILMN_203654	9430028F23RIK	ri|9430028F23|PX00108H19|AK034716|2867					AK034716	9430028F23Rik		ILMN_1238335	006280753	S	2323	GTAAACCGACCTGGGTCCGAATGGCAGGGCAAAAACATGCCCAAAGTGTC										
Mus musculus	RefSeq	ILMN_193047	ILMN_256130	NESPAS	NR_002846.2	NR_002846.2		56802	141802301	NR_002846.2	Nespas		ILMN_2493616	003780484	S	849	AAACAGGTACGTCAGCAAGAGCATCATGGCTAGGGGGCGGCCAGAGACCA	2	-	174108840-174108889	2qH4	Mus musculus neuroendocrine secretory protein antisense (Nespas), non-coding RNA.				Gnas-as	Gnas-as
Mus musculus	RefSeq	ILMN_188489	ILMN_214041	6330439K17RIK	NM_172859.2	NM_172859.2		241688	124378023	NM_172859.2	6330439K17Rik	NP_766447.2	ILMN_2453107	006580278	S	6696	GCATGTCAGATCTCAGCAGAGTGATTAACTGTTTATCTTGTGCAGACAAG	2	-	144296378-144296427	2qG1	Mus musculus RIKEN cDNA 6330439K17 gene (6330439K17Rik), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RP23-70J9.3; MGC107224; 2810039F03Rik; AI851115; 6430408C01; 6330439K17Rik	RP23-70J9.3; MGC107224; 2810039F03Rik; AI851115; 6430408C01; 6330439K17Rik
Mus musculus	RefSeq	ILMN_214041	ILMN_214041	6330439K17RIK	NM_172859.2	NM_172859.2		241688	124378023	NM_172859.2	6330439K17Rik	NP_766447.2	ILMN_2643588	000240156	S	3486	TGGTTTAAAGCCAAAAGTATAAAGTACTATATAATAAAGTTCTCATCCAG	2	-	144299588-144299637	2qG1	Mus musculus RIKEN cDNA 6330439K17 gene (6330439K17Rik), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RP23-70J9.3; MGC107224; 2810039F03Rik; AI851115; 6430408C01; 6330439K17Rik	RP23-70J9.3; MGC107224; 2810039F03Rik; AI851115; 6430408C01; 6330439K17Rik
Mus musculus	RefSeq	ILMN_193337	ILMN_193337	TXNL4B	NM_175646.2	NM_175646.2		234723	31342268	NM_175646.2	Txnl4b	NP_783577.1	ILMN_1257251	000630259	S	1627	GGGGCTATGGCAGCCACCCTGGACACGTGGATGAAAACTTCGAGATTCTA	8	+	112097801-112097850	8qD3	Mus musculus thioredoxin-like 4B (Txnl4b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]		DLP; Dim2; D530025J19Rik; AI595343	DLP; Dim2; D530025J19Rik; AI595343
Mus musculus	Riken	ILMN_205744	ILMN_205744	A330079A07RIK	ri|A330079A07|PX00133N19|AK039657|976					AK039657	A330079A07Rik		ILMN_2574906	005220463	S	874	CAGACTACAGCAGAAGCCCGAGATCATCAGAGACCCCATCCAGTCCCCAG										
Mus musculus	MEEBO	ILMN_186235	ILMN_186235	2410015A16RIK	scl073150.6_183				54144476	NM_029627	2410015A16Rik		ILMN_2433785	006480128	S	20	TAGAATGTCACTCTCAGTGTATGTACAAGGGCAGCTTCCCACCAGTGAGG										
Mus musculus	RefSeq	ILMN_217893	ILMN_217893	GPC5	NM_175500.3	NM_175500.3		103978	141802066	NM_175500.3	Gpc5	NP_780709.1	ILMN_2719860	007210477	S	1438	GCCCCCGCTGTACTTTTGACCCAAGCAAAGAGAAACATGGAATGAAGATC	14	+	115798411-115798460	14qE4	Mus musculus glypican 5 (Gpc5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]			A230034F01Rik	A230034F01Rik
Mus musculus	RefSeq	ILMN_217893	ILMN_217893	GPC5	NM_175500.3	NM_175500.3		103978	141802066	NM_175500.3	Gpc5	NP_780709.1	ILMN_2688985	005810156	S	1545	CTTAGGCTGCATGGGTCCTTCTATGGTGGCCTGGCTGACCAGCTTTGTGT	14	+	115827377-115827426	14qE4	Mus musculus glypican 5 (Gpc5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]			A230034F01Rik	A230034F01Rik
Mus musculus	RefSeq	ILMN_217893	ILMN_217893	GPC5	NM_175500.3	NM_175500.3		103978	141802066	NM_175500.3	Gpc5	NP_780709.1	ILMN_1254628	003800717	S	2746	CTCTGCTCCTCTTTTGTCTTTCCCTAAAACAACTCGCTATGTCAGAAAGC	14	+	116924312-116924361	14qE4	Mus musculus glypican 5 (Gpc5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]			A230034F01Rik	A230034F01Rik
Mus musculus	RefSeq	ILMN_207528	ILMN_207528	5033411B22RIK	XM_148178.3	XM_148178.3			38080975	XM_148178.3	5033411B22Rik		ILMN_1260480	006660440	I	1722	TGGGAGCACTGGATTTGGGCTTGCAACTACCCTGCTGGATACAGGTTCCA										
Mus musculus	Riken	ILMN_204724	ILMN_204724	KIT	ri|B930010O12|PX00162P01|AK047010|3887					AK047010	Kit		ILMN_1216898	000510086	S	3178	TGGCCTTTTCTTTTCTGCCATCAGCCACCGTCCGCTGCGAAGGTCCGAAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence TAS]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IGI]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IMP]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with stem cell factor, a cytokine that stimulates mast cell growth and differentiation, to initiate a change in cell activity [goid 5020] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211759	ILMN_211759	SNX14	NM_172926.1	NM_172926.1		244962	27370427	NM_172926.1	Snx14	NP_766514.1	ILMN_2889274	006520113	S	2812	GGCCTGCAGCAGCCAGTGCTCAACAAGCAGCTGACCTATGTGTTGCTGGA	9	-	88177438-88177459:88178063-88178090	9qE3.1	Mus musculus sorting nexin 14 (Snx14), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	YR-14; C330035N22Rik; B830022K16	YR-14; C330035N22Rik; B830022K16
Mus musculus	Riken	ILMN_205496	ILMN_205496	D130019H05RIK	ri|D130019H05|PX00183E14|AK051227|1893					AK051227	D130019H05Rik		ILMN_1222593	004040601	S	1313	GCCATGGGCCTCATGTGTGCATGCATTCTGCTTCACTGTAGTGAGTTTGG										
Mus musculus	RefSeq	ILMN_197221	ILMN_197221	LOC215253	XM_123774.2	XM_123774.2			38074658	XM_123774.2	LOC215253		ILMN_1225023	001190484	S	895	TGCAACTGTTCTCGAGTTGAATTACTGGCCAAGAAGATTTCTCCGCTGGG										
Mus musculus	Riken	ILMN_204464	ILMN_204464	B130017E20RIK	ri|B130017E20|PX00157F15|AK044977|2797					AK044977	B130017E20Rik		ILMN_1222479	000540189	S	2688	CCCTGTCTCACAGTAAAGTAAGGGCTGGGGAGGTGGCTGGCGTGACTAAG										
Mus musculus	RefSeq	ILMN_194924	ILMN_194924	VGLL1	NM_133251.1	NM_133251.1		170828	18875429	NM_133251.1	Vgll1	NP_573514.1	ILMN_2939096	002570220	S	1022	CTGCAGCCCTGCCAAGATAGCTGGAAGCACAGGATCGCTCATGAACCTGC	X	+	54355233-54355282	XqA5	Mus musculus vestigial like 1 homolog (Drosophila) (Vgll1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Tondu	Tondu
Mus musculus	RefSeq	ILMN_199202	ILMN_252752	SKAP1	NM_001033186.2	NM_001033186.2		78473	141803165	NM_001033186.2	Skap1	NP_001028358.1	ILMN_1224032	002510619	S	1389	GACAGCAACGAAGGAAATCATGGGAGGAAGAGGTTACTGATGGGTTGTGG	11	+	96620168-96620217	11qD	Mus musculus src family associated phosphoprotein 1 (Skap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence ISA]	1700091G21Rik; Skap-55; Scap1	1700091G21Rik; Skap-55; Scap1
Mus musculus	RefSeq	ILMN_218029	ILMN_218029	RPL37	NM_026069.2	NM_026069.2		67281	142387412	NM_026069.2	Rpl37	NP_080345.1	ILMN_1223052	004880678	S	390	GGTACTTTAACATCGGTTCAGAGTTCGGTTATATGATTGCTCTGGGATCC	15	+	5068695-5068744	15qA1	Mus musculus ribosomal protein L37 (Rpl37), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	3110005M08Rik	3110005M08Rik
Mus musculus	RefSeq	ILMN_218029	ILMN_218029	RPL37	NM_026069.2	NM_026069.2		67281	142387412	NM_026069.2	Rpl37	NP_080345.1	ILMN_2696977	003310041	S	188	GCCAAGGCTAAGAGACGAAACACTACCGGGACTGGTCGGATGAGGCACCT	15	+	5067630-5067679	15qA1	Mus musculus ribosomal protein L37 (Rpl37), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	3110005M08Rik	3110005M08Rik
Mus musculus	RefSeq	ILMN_218029	ILMN_218029	RPL37	NM_026069.2	NM_026069.2		67281	142387412	NM_026069.2	Rpl37	NP_080345.1	ILMN_1236446	005390112	S	633	CCATGCCTACAGTGTCTTAAGACGCTTACAGTCTGTAAGGGACTTAAATG	15	+	5068938-5068987	15qA1	Mus musculus ribosomal protein L37 (Rpl37), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	3110005M08Rik	3110005M08Rik
Mus musculus	RefSeq	ILMN_194716	ILMN_239987	LAMP2	NM_001017959.1	NM_001017959.1		16784	63054836	NM_001017959.1	Lamp2	NP_001017959.1	ILMN_2508945	006980102	S	1360	TTGGTCTCAAGCGCCATCATACTGGATATGAGCAATTTTAGTAACTGCAA	X	-	35758599-35758608:35758609-35758648	XqA3.3	Mus musculus lysosomal-associated membrane protein 2 (Lamp2), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding the platelet dense granule [goid 31088] [evidence ISO]			Lamp-2c; CD107b; Lamp-2b; Lamp-2a; Lamp-2	Lamp-2c; CD107b; Lamp-2b; Lamp-2a; Lamp-2
Mus musculus	RefSeq	ILMN_239987	ILMN_239987	LAMP2	NM_001017959.1	NM_001017959.1		16784	63054836	NM_001017959.1	Lamp2	NP_001017959.1	ILMN_3153207	006330561	A	932	CCCTGCCACAACCAACTTCACCGGCAGCTGTCAACCTCAAAGTGCTCAAC	X	-	35784144-35784193	XqA3.3	Mus musculus lysosomal-associated membrane protein 2 (Lamp2), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding the platelet dense granule [goid 31088] [evidence ISO]			Lamp-2c; CD107b; Lamp-2b; Lamp-2a; Lamp-2	Lamp-2c; CD107b; Lamp-2b; Lamp-2a; Lamp-2
Mus musculus	RefSeq	ILMN_239987	ILMN_239987	LAMP2	NM_001017959.1	NM_001017959.1		16784	63054836	NM_001017959.1	Lamp2	NP_001017959.1	ILMN_3074259	005270358	I	1292	CCTTGTGCCCATAGCGGTGGGAGCAGCTCTGGGAGGAGTACTTATTCTAG	X	-	35758667-35758716	XqA3.3	Mus musculus lysosomal-associated membrane protein 2 (Lamp2), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding the platelet dense granule [goid 31088] [evidence ISO]			Lamp-2c; CD107b; Lamp-2b; Lamp-2a; Lamp-2	Lamp-2c; CD107b; Lamp-2b; Lamp-2a; Lamp-2
Mus musculus	RefSeq	ILMN_221936	ILMN_226665	2310039D24RIK	XM_910911.3	XM_910911.3		75704	149259243	XM_910911.3	2310039D24Rik	XP_916004.3	ILMN_1241347	004780477	S	1718	CAACAGAGTCAAGATGAGGATACTCTACACAAGATGTTTGTTGGTCAAAG				8qC5	PREDICTED: Mus musculus RIKEN cDNA 2310039D24 gene (2310039D24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196184	ILMN_240444	CD244	NM_018729.2	NM_018729.2		18106	122114645	NM_018729.2	Cd244	NP_061199.2	ILMN_1228984	006560706	S	3531	GGAGTGGAGTCAAGGTGATTGGTAAGCAGAGACAATAAGAGATGATGGAG	1	+	173515220-173515269	1qH3	Mus musculus CD244 natural killer cell receptor 2B4 (Cd244), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nmrk; Ly90; SLAMF4; F730046O15Rik; NAIL; 2B4; C9.1; NKR2B4	Nmrk; Ly90; SLAMF4; F730046O15Rik; NAIL; 2B4; C9.1; NKR2B4
Mus musculus	RefSeq	ILMN_240444	ILMN_240444	CD244	NM_018729.2	NM_018729.2		18106	122114645	NM_018729.2	Cd244	NP_061199.2	ILMN_3081873	001110136	A	350	GTCCCAGTTGGTCAAATGTATCTTTTAGTGATATCTATGGTTTTGATTAT	1	+	173503968-173504017	1qH3	Mus musculus CD244 natural killer cell receptor 2B4 (Cd244), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nmrk; Ly90; SLAMF4; F730046O15Rik; NAIL; 2B4; C9.1; NKR2B4	Nmrk; Ly90; SLAMF4; F730046O15Rik; NAIL; 2B4; C9.1; NKR2B4
Mus musculus	RefSeq	ILMN_240444	ILMN_240444	CD244	NM_018729.2	NM_018729.2		18106	122114645	NM_018729.2	Cd244	NP_061199.2	ILMN_3011376	004540064	I	1068	GCCACAGCAGACTTTCCCTGGAGATAGAGGCACCATGTACTCTATGATAC	1	+	173509244-173509293	1qH3	Mus musculus CD244 natural killer cell receptor 2B4 (Cd244), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nmrk; Ly90; SLAMF4; F730046O15Rik; NAIL; 2B4; C9.1; NKR2B4	Nmrk; Ly90; SLAMF4; F730046O15Rik; NAIL; 2B4; C9.1; NKR2B4
Mus musculus	RefSeq	ILMN_223199	ILMN_223199	NSF	NM_008740.4	NM_008740.4		18195	145966788	NM_008740.4	Nsf	NP_032766.2	ILMN_2760629	006180437	S	3445	GGCAAATCATCTCCTAGTCTTGCCGTCTGTATACCTTGTTTGGGGTTTTC				11qE1	Mus musculus N-ethylmaleimide sensitive fusion protein (Nsf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive some other reaction, for example ion transport across a membrane [goid 42623] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI316878; AU067812; SKD2; AU020090	AI316878; AU067812; SKD2; AU020090
Mus musculus	RefSeq	ILMN_216388	ILMN_216388	RBM9	NM_053104.4	NM_053104.4		93686	142379910	NM_053104.4	Rbm9	NP_444334.2	ILMN_1222770	005720092	S	3265	GTATCCGAAAGGCAAGGGTCCCACAGAGGCTCCAAAATGAAGGCATTAGG	15	-	76913012-76913061	15qD3-qE1	Mus musculus RNA binding motif protein 9 (Rbm9), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Fbm2; AI118529; AA407676; 2810460A15Rik; Hrnbp2; Fxh	Fbm2; AI118529; AA407676; 2810460A15Rik; Hrnbp2; Fxh
Mus musculus	RefSeq	ILMN_213406	ILMN_213406	ASNS	NM_012055.3	NM_012055.3		27053	146134364	NM_012055.3	Asns	NP_036185.1	ILMN_2636755	000580670	S	277	GCCGATAAGAGTGAGGAAATACCCTTATTTGTGGCTCTGTTACAATGGTG				6qA1	Mus musculus asparagine synthetase (Asns), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid [goid 6529] [evidence ISO]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate [goid 4066] [evidence ISO]		
Mus musculus	RefSeq	ILMN_213406	ILMN_213406	ASNS	NM_012055.3	NM_012055.3		27053	146134364	NM_012055.3	Asns	NP_036185.1	ILMN_2643513	001260164	S	1801	GTGTAAAAGTAAATGTTTCTTCCGGCTCTGAAGGTCGAGACAGCGACACA				6qA1	Mus musculus asparagine synthetase (Asns), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid [goid 6529] [evidence ISO]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate [goid 4066] [evidence ISO]		
Mus musculus	MEEBO	ILMN_191033	ILMN_191033	MSL2	scl077853.1_3				51765082	XM_150227	Msl2		ILMN_2541591	004060376	S	1414	ATGGCCAATGGGGAGAAGAAGCTGGAGGCATTTGCGGTGCCAGAAAAGGC										
Mus musculus	RefSeq	ILMN_197809	ILMN_197809	LOC230185	XM_143763.3	XM_143763.3			38078352	XM_143763.3	LOC230185		ILMN_2529440	002480360	S	1466	CCTCTGGCCACAAGAAGAAGGGTGATGATCAGAACTGGCAAACCAGTGCC										
Mus musculus	RefSeq	ILMN_197541	ILMN_197541	LOC212434	XM_143235.3	XM_143235.3			38076495	XM_143235.3	LOC212434		ILMN_1226535	004210201	S	5752	GGTTTCATTGGCCCAGGATCAGGGCATCTAGTGAGCTTCTTAGCTTGGGG										
Mus musculus	RefSeq	ILMN_218544	ILMN_218544	FNBP4	NM_018828.2	NM_018828.2		55935	118130721	NM_018828.2	Fnbp4	NP_061298.1	ILMN_1251257	001740064	S	4234	GTGCAGAACATGCACTGACATTTGAACATCGGGAAAGTGATGGCTTGGGG	2	+	90620721-90620770	2qE1	Mus musculus formin binding protein 4 (Fnbp4), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FBP30; Fnbp30; mKIAA1014	FBP30; Fnbp30; mKIAA1014
Mus musculus	RefSeq	ILMN_218544	ILMN_218544	FNBP4	NM_018828.2	NM_018828.2		55935	118130721	NM_018828.2	Fnbp4	NP_061298.1	ILMN_1260410	001440594	S	2801	TGGGTCATCAGGCCCGAGGGATGAGCCTGCAGTCAAATTACCTCGGCCTA	2	+	90617806-90617855	2qE1	Mus musculus formin binding protein 4 (Fnbp4), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FBP30; Fnbp30; mKIAA1014	FBP30; Fnbp30; mKIAA1014
Mus musculus	RefSeq	ILMN_219579	ILMN_219579	SRGAP3	NM_080448.4	NM_080448.4		259302	154090966	NM_080448.4	Srgap3	NP_536696.4	ILMN_1219048	005490451	S	4650	GGGACTTCTCTGGGAGAACTTAGAGGCCCCACAGTAACTGCGAACGAAGC				6qE3	Mus musculus SLIT-ROBO Rho GTPase activating protein 3 (Srgap3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130026O08Rik; WRP; AI452337; Gbi; mKIAA0411; MEGAP; Arhgap14	D130026O08Rik; WRP; AI452337; Gbi; mKIAA0411; MEGAP; Arhgap14
Mus musculus	RefSeq	ILMN_214445	ILMN_219579	SRGAP3	NM_080448.4	NM_080448.4		259302	154090966	NM_080448.4	Srgap3	NP_536696.4	ILMN_2648098	004200392	S	8723	TGATGCTAACTGTTGCCCTCTTCTGGGTATCATTTCTCTACCTTATGACC				6qE3	Mus musculus SLIT-ROBO Rho GTPase activating protein 3 (Srgap3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130026O08Rik; WRP; AI452337; Gbi; mKIAA0411; MEGAP; Arhgap14	D130026O08Rik; WRP; AI452337; Gbi; mKIAA0411; MEGAP; Arhgap14
Mus musculus	RefSeq	ILMN_219579	ILMN_219579	SRGAP3	NM_080448.4	NM_080448.4		259302	154090966	NM_080448.4	Srgap3	NP_536696.4	ILMN_1213498	001770367	S	4291	GACATGCCAAGGAATGCTGGAGCAAGATCAGTCCCAAGGACAGTGTTTCC				6qE3	Mus musculus SLIT-ROBO Rho GTPase activating protein 3 (Srgap3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130026O08Rik; WRP; AI452337; Gbi; mKIAA0411; MEGAP; Arhgap14	D130026O08Rik; WRP; AI452337; Gbi; mKIAA0411; MEGAP; Arhgap14
Mus musculus	MEEBO	ILMN_194374	ILMN_194374	TCTA	scl35353.3_109				31077076	NM_133986	Tcta		ILMN_1254215	005720110	S	16	GCAATGGTGGTGGACAATATCCCCGTTAGCTTTTTTGGGGACTTGGGAGG										
Mus musculus	MEEBO	ILMN_193213	ILMN_193213	2310036D22RIK	scl30378.11_478				21624614	NM_027992	2310036D22Rik		ILMN_1231096	005720370	S	17	CCTAAGCTCTGACAGTCGATTCGGATGGTGGAATAGAGAATGTAAGGTCC										
Mus musculus	RefSeq	ILMN_220095	ILMN_220095	A730017C20RIK	NM_173759.3	NM_173759.3		225583	142366047	NM_173759.3	A730017C20Rik	NP_776120.1	ILMN_1233444	000830358	S	1683	CCAAAGAGTGCCGTCCTCTCGTGCCCCTTGATAACGCCTTACTATCTCGC	18	+	59236484-59236533	18qD3	Mus musculus RIKEN cDNA A730017C20 gene (A730017C20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_212628	ILMN_212628	D830007F02RIK	NM_175441.3	NM_175441.3		213435	83776558	NM_175441.3	D830007F02Rik	NP_780650.2	ILMN_3141648	003710356	A	1852	TGTGGATGGAGGCGAACTCTTTGACCGGATCACGGATGAGAAGTACCACC	8	-	88240558-88240607	8qC3	Mus musculus RIKEN cDNA D830007F02 gene (D830007F02Rik), mRNA.				MLCK	MLCK
Mus musculus	RefSeq	ILMN_212628	ILMN_212628	D830007F02RIK	NM_175441.3	NM_175441.3		213435	83776558	NM_175441.3	D830007F02Rik	NP_780650.2	ILMN_3063923	003800725	I	1062	TGAGTTCAGGGCCTCTCCCTCAGCCCCTAGGACCACTAACTCCTGACAGT	8	-	88249047-88249096	8qC3	Mus musculus RIKEN cDNA D830007F02 gene (D830007F02Rik), mRNA.				MLCK	MLCK
Mus musculus	RefSeq	ILMN_216802	ILMN_216802	OLFR1337	NM_146309.1	NM_146309.1		258306	22129668	NM_146309.1	Olfr1337	NP_666421.1	ILMN_2675543	000010037	S	674	CCATGGCGATTCTCAAGATCAAGTCCAACCAGGGCCGTTGCAAGGCTTTC	4	-	118454465-118454514	4qD2.1	Mus musculus olfactory receptor 1337 (Olfr1337), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR259-10	MOR259-10
Mus musculus	RefSeq	ILMN_198645	ILMN_321740	LOC100045896	XM_001475125.1	XM_001475125.1		100045896	149257133	XM_001475125.1	LOC100045896	XP_001475175.1	ILMN_2532420	000730064	S	886	GTGTACCCAAGGCCTACTGCACTGAGAATTCCCGCTATGGGAGTGCCAGG					PREDICTED: Mus musculus similar to hCG1796489 (LOC100045896), mRNA.					
Mus musculus	RefSeq	ILMN_199075	ILMN_199075	LOC216375	XM_147455.1	XM_147455.1			20866227	XM_147455.1	LOC216375		ILMN_1222577	003370670	S	555	TGCACTGTCTTGGAAATGCCTTGTAGAGGATGGGGGTGTGTGGGGCTCCC										
Mus musculus	RefSeq	ILMN_198468	ILMN_198468	LOC381236	XM_355172.1	XM_355172.1			38085329	XM_355172.1	LOC381236		ILMN_1226757	005670711	S	2761	CACTCCAACGGCTTTCAAGGTTTGTGATGAAGTCAAAAAGGTTTGTGTGG										
Mus musculus	RefSeq	ILMN_211956	ILMN_211956	UBE2Q2	NM_180600.1	NM_180600.1		109161	30725840	NM_180600.1	Ube2q2	NP_850931.1	ILMN_2826027	005900435	S	2538	TTGCAAACCACATCTAGGAGATGTGGCACTTGTGCATTTTATGTGTGGTG	9	+	55005272-55005321	9qB	Mus musculus ubiquitin-conjugating enzyme E2Q (putative) 2 (Ube2q2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	3010021M21Rik; MGC19370	3010021M21Rik; MGC19370
Mus musculus	RefSeq	ILMN_199734	ILMN_244932	EG546623	XM_905258.3	XM_905258.3		546623	149266232	XM_905258.3	EG546623	XP_910351.3	ILMN_2536290	005820092	S	279	GATGGCCACCACCATGAACAAGCAGAAGGACCCAGGTGCCCTTGACCAAA				14qE2.3	PREDICTED: Mus musculus predicted gene, EG546623 (EG546623), mRNA.					
Mus musculus	RefSeq	ILMN_200940	ILMN_200940	LOC384664	XM_357776.1	XM_357776.1			38087181	XM_357776.1	LOC384664		ILMN_1215283	001030326	S	374	GCTCTGAGAAAGCAAATCCGGCAGTTCAGTGTGGGGTGGATGGGAGCAGG										
Mus musculus	Riken	ILMN_203916	ILMN_203916	9830165L15RIK	ri|9830165L15|PX00118N17|AK036713|3741					AK036713	9830165L15Rik		ILMN_1223852	003400072	S	3512	GGGTGGATGCCTATAACTCGTGTGTTGTGGGTGAGTTTCCCTGTGATGGC										
Mus musculus	RefSeq	ILMN_217284	ILMN_217284	DOK3	NM_013739.2	NM_013739.2		27261	118130854	NM_013739.2	Dok3	NP_038767.1	ILMN_1258357	000610291	S	1470	GAGGAGCCACACTCTGCCCTACCTCCTCCCTCAGACTGTACAGATTGAAC	13	-	55624622-55624671	13qB1	Mus musculus docking protein 3 (Dok3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IDA]	Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI450713; MGC151299; Dokl	AI450713; MGC151299; Dokl
Mus musculus	RefSeq	ILMN_225036	ILMN_225036	OLFR1193	NM_001011517.1	NM_001011517.1		329460	58696423	NM_001011517.1	Olfr1193	NP_001011517.1	ILMN_2890078	005910491	S	904	GCAATGAGAAAACTGTGGGCTAGAAAGTTTTCCTGGGAAACTACTGGGAA	2	+	88518917-88518966	2qD	Mus musculus olfactory receptor 1193 (Olfr1193), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr1193-ps1; MOR226-1	Olfr1193-ps1; MOR226-1
Mus musculus	RefSeq	ILMN_185108	ILMN_225993	MYO3B	NM_177376.3	NM_177376.3		329421	111120333	NM_177376.3	Myo3b	NP_796350.2	ILMN_2681248	001980647	S	5000	GGAAGGTTGCTATGTGCTGTGACAGTGAGTCCGCGTGAAGACTCCTCTAG	2	+	70265996-70266045	2qC2	Mus musculus myosin IIIB (Myo3b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	A430065P19Rik	A430065P19Rik
Mus musculus	RefSeq	ILMN_184283	ILMN_184283	YTHDF1	NM_173761.3	NM_173761.3		228994	40789291	NM_173761.3	Ythdf1	NP_776122.1	ILMN_1235701	006980327	S	2702	AATTGTAGGAATCTGATAGTACAGGCAGTGTGATGGATGCTGCTGCCGAC	2	-	180639501-180639550	2qH4	Mus musculus YTH domain family 1 (Ythdf1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2210410K23Rik; 8030473O16	2210410K23Rik; 8030473O16
Mus musculus	RefSeq	ILMN_220794	ILMN_220794	PAK1IP1	NM_026550.2	NM_026550.2		68083	145046258	NM_026550.2	Pak1ip1	NP_080826.2	ILMN_1245031	006330369	S	1301	GGTGACACAGTTCAGGAAGAAACATCAGAACCTAACTCGGAGAAATCTGA	13	+	41107963-41108012	13qA3.3	Mus musculus PAK1 interacting protein 1 (Pak1ip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]		AI314040; AA419825; AW556169; 5930415H02Rik; Gdpd1; PIP1; MGC151108; MGC151106; 5830431I15Rik	AI314040; AA419825; AW556169; 5930415H02Rik; Gdpd1; PIP1; MGC151108; MGC151106; 5830431I15Rik
Mus musculus	RefSeq	ILMN_205380	ILMN_317692	LOC100039011	XR_030562.1	XR_030562.1		100039011	149272538	XR_030562.1	LOC100039011		ILMN_1224586	006650253	S	692	TCTGACTGGACTACACAGGCTTCAGTTCATCCCAGAACTGCTGTGGGGAG	X|NT_165789.2	+	259766-259815		PREDICTED: Mus musculus similar to RIKEN cDNA 5930416I19 gene (LOC100039011), misc RNA.					
Mus musculus	RefSeq	ILMN_209590	ILMN_311207	LOC100046608	XM_001476583.1	XM_001476583.1		100046608	149240740	XM_001476583.1	LOC100046608	XP_001476633.1	ILMN_2706514	003520020	S	6082	GGCAGTCCCTTAGCCTTGGCCAGGGAATTATTCAATCCGCTATAGACATC					PREDICTED: Mus musculus similar to Bcl2-like protein (LOC100046608), mRNA.					
Mus musculus	RefSeq	ILMN_209620	ILMN_311207	LOC100046608	XM_001476583.1	XM_001476583.1		100046608	149240740	XM_001476583.1	LOC100046608	XP_001476633.1	ILMN_2597567	006860397	S	917	GACACCCCTTCATCCAAGAATGCAAAGCACATCCAATAAAAGAGCTGGAT					PREDICTED: Mus musculus similar to Bcl2-like protein (LOC100046608), mRNA.					
Mus musculus	RefSeq	ILMN_209620	ILMN_311207	LOC100046608	XM_001476583.1	XM_001476583.1		100046608	149240740	XM_001476583.1	LOC100046608	XP_001476633.1	ILMN_1215796	000510328	S	901	GTTCGGTGTAACTAAAGACACCCCTTCATCCAAGAATGCAAAGCACATCC					PREDICTED: Mus musculus similar to Bcl2-like protein (LOC100046608), mRNA.					
Mus musculus	RefSeq	ILMN_209590	ILMN_311207	LOC100046608	XM_001476583.1	XM_001476583.1		100046608	149240740	XM_001476583.1	LOC100046608	XP_001476633.1	ILMN_1249366	001400168	S	6131	CTGTGCACTGTGCATCTCTCCAGGCATGAAGAAAACCAGGTAGAGGGCAG					PREDICTED: Mus musculus similar to Bcl2-like protein (LOC100046608), mRNA.					
Mus musculus	RefSeq	ILMN_209590	ILMN_311207	LOC100046608	XM_001476583.1	XM_001476583.1		100046608	149240740	XM_001476583.1	LOC100046608	XP_001476633.1	ILMN_2597272	002900390	S	1828	AAATTATATGCATTATCAATGATGTACCATGAAACAAAGTTGTGATCTTT					PREDICTED: Mus musculus similar to Bcl2-like protein (LOC100046608), mRNA.					
Mus musculus	RefSeq	ILMN_209590	ILMN_311207	LOC100046608	XM_001476583.1	XM_001476583.1		100046608	149240740	XM_001476583.1	LOC100046608	XP_001476633.1	ILMN_1243345	005720725	S	1789	GCCCCAAACAAATATGCAAAAGGTTCACTAAAGCAGTAGAAATTATATGC					PREDICTED: Mus musculus similar to Bcl2-like protein (LOC100046608), mRNA.					
Mus musculus	RefSeq	ILMN_197133	ILMN_225636	4930533C12RIK	XM_982944.1	XM_982944.1		211430	94363285	XM_982944.1	4930533C12Rik	XP_988038.1	ILMN_1223331	000990719	S	5357	TTGAGTCCGCACCCCCTACCTACAAGCATTTGGGGCCTAAGAAGGAGCGC	1	+	36362416-36362418:36362648-36362694	1qB	PREDICTED: Mus musculus RIKEN cDNA 4930533C12 gene (4930533C12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215436	ILMN_215436	PITPNB	NM_019640.4	NM_019640.4		56305	146134917	NM_019640.4	Pitpnb	NP_062614.1	ILMN_2659467	001400070	S	2633	CTAACAGCTGTGGAGACTGAGGGACGTGTATGAGCGTAAAGCACCTGCTT				5qF	Mus musculus phosphatidylinositol transfer protein, beta (Pitpnb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence ISA]	AU040890; AI256223	AU040890; AI256223
Mus musculus	RefSeq	ILMN_218857	ILMN_218857	CALR	NM_007591.3	NM_007591.3		12317	116875821	NM_007591.3	Calr	NP_031617.1	ILMN_2861176	000650291	S	758	AAGGACCCTGATGCTGCCAAGCCGGAAGACTGGGATGAACGAGCCAAGAT	8	-	87368500-87368549	8qC3	Mus musculus calreticulin (Calr), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that modulates the frequency, rate or extent of meiosis, the process by which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes [goid 40020] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	Calregulin; CRT	Calregulin; CRT
Mus musculus	RefSeq	ILMN_197378	ILMN_251484	LOC677515	XR_005076.1	XR_005076.1		677515	94410263	XR_005076.1	LOC677515		ILMN_1241698	005870681	S	788	GCATGATTTCCTTAAGTATCTGGCAAAGAATTCTGCCTCTGTTAACTGCC					PREDICTED: Mus musculus similar to Mortality factor 4 like 2 (LOC677515), misc RNA.					
Mus musculus	MEEBO	ILMN_195194	ILMN_195194	IGKV4-71_AJ231218_IG_KAPPA_VARIABLE_4-71_20	IGKV4-71_AJ231218_Ig_kappa_variable_4-71_20						IGKV4-71_AJ231218_Ig_kappa_variable_4-71_20		ILMN_2513393	002070300	S	20	AGTGCCTCAGTCATACTATTCAGAGGACAAATTGTTCTCACCCAGTCTCC										
Mus musculus	MEEBO	ILMN_187717	ILMN_187717	A430010J10RIK	scl29935.8_52				31342503	NM_176975	A430010J10Rik		ILMN_1223280	000540215	S	1	AAAGAGAACAGCTGATCAGGATTCCTCTTCCAGAGCCAAACGTGAGGTTA										
Mus musculus	MEEBO	ILMN_187717	ILMN_187717	A430010J10RIK	scl29935.8_52				31342503	NM_176975	A430010J10Rik		ILMN_1230689	002510315	S	2953	GGGCAAGAGATAGTCAGGCGTTCAAGGAGCAAACAAGTGGGAAAAGATGG										
Mus musculus	RefSeq	ILMN_209954	ILMN_209954	IHPK3	NM_173027.2	NM_173027.2		271424	142376092	NM_173027.2	Ihpk3	NP_766615.1	ILMN_2600779	004120181	S	2102	CAGGAACCCCAAGACGATGTTTACAAGCATGGTGGACACAAGTAAATGAG	17	-	27281069-27281118	17qA3.3	Mus musculus inositol hexaphosphate kinase 3 (Ihpk3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IEA]	D830007E07Rik	D830007E07Rik
Mus musculus	RefSeq	ILMN_210399	ILMN_210399	COMMD10	NM_178377.4	NM_178377.4		69456	118130588	NM_178377.4	Commd10	NP_848464.1	ILMN_1214167	007510670	S	1095	CAGGGATCAGGGAAGGTCTGTAGGCAGAAGGTATGATGGTGCCCTAGCAG	18	+	47247194-47247243	18qC	Mus musculus COMM domain containing 10 (Commd10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DRWMS2; 2310003A05Rik; AU019438	DRWMS2; 2310003A05Rik; AU019438
Mus musculus	RefSeq	ILMN_189297	ILMN_240717	AGPAT9	NM_172715.3	NM_172715.3		231510	117553636	NM_172715.3	Agpat9	NP_766303.1	ILMN_1241390	001820014	S	685	CTTTCAGTACATCAGTCCAAGGCTCACCATGGTGTGGGTGCTGGGTGTCC	5	+	101312399-101312448	5qE4	Mus musculus 1-acylglycerol-3-phosphate O-acyltransferase 9 (Agpat9), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IEA]	4933408F15	4933408F15
Mus musculus	RefSeq	ILMN_189297	ILMN_240717	AGPAT9	NM_172715.3	NM_172715.3		231510	117553636	NM_172715.3	Agpat9	NP_766303.1	ILMN_2675268	000730605	S	1570	GGGCAACGGATCTCCCAACCTGGCGAGGGACTGAAGCATCGTGGATAAAC	5	+	101326814-101326847:101326848-101326863	5qE4	Mus musculus 1-acylglycerol-3-phosphate O-acyltransferase 9 (Agpat9), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IEA]	4933408F15	4933408F15
Mus musculus	RefSeq	ILMN_202506	ILMN_320003	1700063K16RIK	XR_034708.1	XR_034708.1		76610	149268016	XR_034708.1	1700063K16Rik		ILMN_2550130	002190494	S	335	CGGCCCAGCTCTAAAGAAAGCTTGCCAACCACTTGACTACGAGGACACTG				16qC3.1	PREDICTED: Mus musculus RIKEN cDNA 1700063K16 gene (1700063K16Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_200947	ILMN_310455	LOC665281	XR_031065.1	XR_031065.1		665281	149272165	XR_031065.1	LOC665281		ILMN_2540573	005560041	S	340	ATGGGTAGGCCTCTGTAAAATCGATCGTGAGGGCAAACCACGGAAGCTGG	X	+	120628299-120628348	XqE3	PREDICTED: Mus musculus similar to 40S ribosomal protein S12 (LOC665281), misc RNA.					
Mus musculus	RefSeq	ILMN_209529	ILMN_209529	BC048403	NM_173022.2	NM_173022.2		270802	41055589	NM_173022.2	BC048403	NP_766610.2	ILMN_2605558	003170722	S	2797	CGTTCCCAGTACCTAAAAGAATATATAGGCTTCAGTAAACCATGGAGGGA	10	+	121189595-121189644	10qD2	Mus musculus cDNA sequence BC048403 (BC048403), mRNA.				E030027L10	E030027L10
Mus musculus	RefSeq	ILMN_209529	ILMN_209529	BC048403	NM_173022.2	NM_173022.2		270802	41055589	NM_173022.2	BC048403	NP_766610.2	ILMN_2596666	002450047	S	1470	GGGCAGAGCTAAAGACAGAACCTCCCTAATCATGTTGCACAGTTCATAAG	10	+	121188268-121188317	10qD2	Mus musculus cDNA sequence BC048403 (BC048403), mRNA.				E030027L10	E030027L10
Mus musculus	RefSeq	ILMN_209529	ILMN_209529	BC048403	NM_173022.2	NM_173022.2		270802	41055589	NM_173022.2	BC048403	NP_766610.2	ILMN_2890467	003840397	S	2795	GTCGTTCCCAGTACCTAAAAGAATATATAGGCTTCAGTAAACCATGGAGG	10	+	121189593-121189642	10qD2	Mus musculus cDNA sequence BC048403 (BC048403), mRNA.				E030027L10	E030027L10
Mus musculus	Riken	ILMN_202154	ILMN_202154	3110001A05RIK	ri|3110001A05|ZX00070L23|AK013931|1363					AK013931	3110001A05Rik		ILMN_1246998	005550551	S	716	GCCACCTGCTGGAGACCTGTGGTACTGCCACGACTAGTAGGCCATTTCAT										
Mus musculus	RefSeq	ILMN_185937	ILMN_260510	2510022D24RIK	XM_001004662.1	XM_001004662.1		66567	94419917	XM_001004662.1	2510022D24Rik	XP_001004662.1	ILMN_2431257	006770300	S	172	ACGGCCTTCCACGAGGAGACGCGCTTGACGTTCTCGCCCCTTTCAGAGGA					PREDICTED: Mus musculus RIKEN cDNA 2510022D24 gene (2510022D24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200698	ILMN_200698	LOC384491	XM_357671.1	XM_357671.1			38085280	XM_357671.1	LOC384491		ILMN_1214433	000620091	S	1	ATGCTTGGTGCTCCTGTGTTGCCCTGGCTGCAAACCAAGGTCGTTACAGA										
Mus musculus	RefSeq	ILMN_215868	ILMN_215868	HIST1H1B	NM_020034.1	NM_020034.1		56702	21426892	NM_020034.1	Hist1h1b	NP_064418.1	ILMN_2664593	001470050	S	397	GGTGCTACCCCTAAAAAGCCTAAGAAGACTGCGGGGGCAAAGAAGACCGT	13	-	21871977-21872026	13qA3.1	Mus musculus histone cluster 1, H1b (Hist1h1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	H1B; H1.5; H1f5; H1s-3	H1B; H1.5; H1f5; H1s-3
Mus musculus	RefSeq	ILMN_199639	ILMN_199639	LOC382818	XM_356695.1	XM_356695.1			38075414	XM_356695.1	LOC382818		ILMN_1243389	004210494	S	367	AGAGTGGGCACGGAGTTTAGGGCTCATCCAGAGCTGCAGGCCACTGCTAA										
Mus musculus	RefSeq	ILMN_226731	ILMN_226731	DEFB12	NM_152802.1	NM_152802.1		77674	23680954	NM_152802.1	Defb12	NP_690015.1	ILMN_2977605	004050717	S	602	GTAGTACAGCAAACCTGGGAGACAAGGGACAGTGTGGGCATCACTACCTC	8	-	19112253-19112302	8qA1.3	Mus musculus defensin beta 12 (Defb12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism [goid 50829] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9230103N16Rik; mBD-12	9230103N16Rik; mBD-12
Mus musculus	RefSeq	ILMN_193555	ILMN_193555	ZSWIM1	NM_028028.2	NM_028028.2		71971	31980692	NM_028028.2	Zswim1	NP_082304.1	ILMN_2846047	000130427	S	2613	CCTCCCCACAAAGGCAGAGACTATGGTGAGGCCGTCAAGCTTCCCAGTTC	2	+	164652279-164652328	2qH3	Mus musculus zinc finger, SWIM domain containing 1 (Zswim1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410003H12Rik; AI850991; BB046916	2410003H12Rik; AI850991; BB046916
Mus musculus	RefSeq	ILMN_214760	ILMN_214760	DMWD	NM_010058.1	NM_010058.1		13401	31044424	NM_010058.1	Dmwd	NP_034188.1	ILMN_1253447	007560274	S	1970	CAGGCAGGGCAAGCAAGTTGGCCCAGGTCACCCAGCAAGTCAGTTGTAGA	7	+	19667292-19667341	7qA3	Mus musculus dystrophia myotonica-containing WD repeat motif (Dmwd), mRNA.				Dm9; DMR-N9; MGC115779; MGC37679	Dm9; DMR-N9; MGC115779; MGC37679
Mus musculus	RefSeq	ILMN_214760	ILMN_214760	DMWD	NM_010058.1	NM_010058.1		13401	31044424	NM_010058.1	Dmwd	NP_034188.1	ILMN_2914010	000630053	S	2448	AGTGTTAAATTATGGAAGCCCTGAGGGCCCTCCTTGTTCCCCTGGACCTC	7	+	19668052-19668101	7qA3	Mus musculus dystrophia myotonica-containing WD repeat motif (Dmwd), mRNA.				Dm9; DMR-N9; MGC115779; MGC37679	Dm9; DMR-N9; MGC115779; MGC37679
Mus musculus	RefSeq	ILMN_214760	ILMN_214760	DMWD	NM_010058.1	NM_010058.1		13401	31044424	NM_010058.1	Dmwd	NP_034188.1	ILMN_2711355	002630491	S	2333	ACTGTTCACTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGG	7	+	19667937-19667986	7qA3	Mus musculus dystrophia myotonica-containing WD repeat motif (Dmwd), mRNA.				Dm9; DMR-N9; MGC115779; MGC37679	Dm9; DMR-N9; MGC115779; MGC37679
Mus musculus	RefSeq	ILMN_221030	ILMN_221030	SLCO1B2	NM_020495.1	NM_020495.1		28253	14547898	NM_020495.1	Slco1b2	NP_065241.1	ILMN_2730145	000380026	S	3138	GAGAACAAATGTCTTTGGATATTGTATTATATAGTGATATCAGATCTAGT	6	+	141634998-141635047	6qG2	Mus musculus solute carrier organic anion transporter family, member 1b2 (Slco1b2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Oatp4; lst-1; OATP2; Slc21a6; mlst-1; OATP-C; Slc21a10	Oatp4; lst-1; OATP2; Slc21a6; mlst-1; OATP-C; Slc21a10
Mus musculus	RefSeq	ILMN_217004	ILMN_221030	SLCO1B2	NM_020495.1	NM_020495.1		28253	14547898	NM_020495.1	Slco1b2	NP_065241.1	ILMN_1255164	004570053	S	2638	CTCTCCTGAAGTCTCTGCAATGGAGGGCTTCATGATGTGGCATATTTTGG	6	+	141634498-141634547	6qG2	Mus musculus solute carrier organic anion transporter family, member 1b2 (Slco1b2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Oatp4; lst-1; OATP2; Slc21a6; mlst-1; OATP-C; Slc21a10	Oatp4; lst-1; OATP2; Slc21a6; mlst-1; OATP-C; Slc21a10
Mus musculus	RefSeq	ILMN_221030	ILMN_221030	SLCO1B2	NM_020495.1	NM_020495.1		28253	14547898	NM_020495.1	Slco1b2	NP_065241.1	ILMN_1251837	001410035	S	962	CGGCTTCATTGTGAATGGACTACTATGCATCATTTGTTCTATACCCTTCT	6	+	141612151-141612200	6qG2	Mus musculus solute carrier organic anion transporter family, member 1b2 (Slco1b2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Oatp4; lst-1; OATP2; Slc21a6; mlst-1; OATP-C; Slc21a10	Oatp4; lst-1; OATP2; Slc21a6; mlst-1; OATP-C; Slc21a10
Mus musculus	RefSeq	ILMN_220161	ILMN_220161	GRAMD1A	NM_027898.3	NM_027898.3		52857	119360343	NM_027898.3	Gramd1a	NP_082174.3	ILMN_2756439	001850541	S	798	GTGCTATGGCTCGGAGCTGGGCCTCACCAGTGAAGACGAAGACTATGTCT	7	-	31924800-31924849	7qB1	Mus musculus GRAM domain containing 1A (Gramd1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			D7Bwg0611e; AW547240; AI415002; 1300003M23Rik	D7Bwg0611e; AW547240; AI415002; 1300003M23Rik
Mus musculus	MEEBO	ILMN_184981	ILMN_184981	9230112E08RIK	scl19776.1_66				31343198	NM_177264	9230112E08Rik		ILMN_2621676	000290500	S	1100	ATCAGCTGTGACCACCCTGGCCATGAAGTAGGGAGGGGTCTGGCTTCAGA										
Mus musculus	MEEBO	ILMN_184981	ILMN_184981	9230112E08RIK	scl19776.1_66				31343198	NM_177264	9230112E08Rik		ILMN_2423196	006350022	S	15	TGTGTGCCCATAGCCTTCACACTCATGACTACATCTAGCTCCCAGGAACA										
Mus musculus	RefSeq	ILMN_214250	ILMN_214250	PTGR1	NM_025968.3	NM_025968.3		67103	141801462	NM_025968.3	Ptgr1	NP_080244.1	ILMN_2645935	001850722	S	1876	AAGGGAGGAATCTGTCACTTACCACAGCTGGGACTGAGGAGTGTTAGGGG	4	-	58978640-58978689	4qB3	Mus musculus prostaglandin reductase 1 (Ptgr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprostanoate + NAD(P)+ = (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprosta-13-enoate + NAD(P)H + H+ [goid 47522] [evidence IEA]; Catalysis of the reaction: n-alkanal + NAD(P)+ = alk-2-enal + NAD(P)H + H+ [goid 32440] [evidence IEA]	2510002C21Rik	2510002C21Rik
Mus musculus	RefSeq	ILMN_197667	ILMN_254576	LOC675732	XM_984683.1	XM_984683.1		675732	94370389	XM_984683.1	LOC675732	XP_989777.1	ILMN_2528935	000290753	S	226	TCTGCGAGACAGCACCCCCTGCGCGGCCCACGTGGCCAAAGTAAACAGAA					PREDICTED: Mus musculus hypothetical protein LOC675732 (LOC675732), mRNA.					
Mus musculus	MEEBO	ILMN_191079	ILMN_191079	ADH6-PS1	scl22545.4.1_177						Adh6-ps1		ILMN_1226298	003310470	S	5	GATAGAGTTTTCAAGGAGGTGGAGGTAAGTGAAAGAACTCAAACCCCTCC										
Mus musculus	Riken	ILMN_203304	ILMN_203304	4932409G17RIK	ri|4932409G17|PX00017G02|AK029945|2670					AK029945	4932409G17Rik		ILMN_1258639	001050343	S	2113	CAAACTGCAGGAGGCGGAGATTAAGGCTAATAGCATTACCAAAGAGCTCC										
Mus musculus	MEEBO	ILMN_212935	ILMN_212935	OLFR894	scl37102.1.1_24				22129136	NM_146868	Olfr894		ILMN_2631775	004260315	S	571	CCTGTAGTAGCACGTATGTCAATGAGCTTATGAGTTATATTGCAGTGGGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_198389	ILMN_226487	GAL3ST3	NM_001024717.1	NM_001024717.1		545276	85701541	NM_001024717.1	Gal3st3	NP_001019888.1	ILMN_1224213	006860195	S	1448	AACTATCTGTTGAGGAAGCAAAAACGCCGCGGTGGTGTGCGGTCCAGGCC	19	+	5307775-5307824	19qA	Mus musculus galactose-3-O-sulfotransferase 3 (Gal3st3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate [goid 1733] [evidence IEA]		
Mus musculus	RefSeq	ILMN_226487	ILMN_226487	GAL3ST3	NM_001024717.1	NM_001024717.1		545276	85701541	NM_001024717.1	Gal3st3	NP_001019888.1	ILMN_3033192	007150706	I	1972	CCAGGTTCTACCTTCCCTACACACACCTAAGCTGCTCCCAGACACACAGA	19	+	5308299-5308348	19qA	Mus musculus galactose-3-O-sulfotransferase 3 (Gal3st3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate [goid 1733] [evidence IEA]		
Mus musculus	RefSeq	ILMN_226487	ILMN_226487	GAL3ST3	NM_001024717.1	NM_001024717.1		545276	85701541	NM_001024717.1	Gal3st3	NP_001019888.1	ILMN_3106849	002360491	A	542	AACCTCACGGTGGCCCTGCCTCACCCTAGCTGCGAGCACCAGTTCTGTTA	19	+	5306869-5306918	19qA	Mus musculus galactose-3-O-sulfotransferase 3 (Gal3st3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate [goid 1733] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188730	ILMN_188730	ZFP281	NM_177643.3	NM_177643.3		226442	141803475	NM_177643.3	Zfp281	NP_808311.1	ILMN_1220893	002070026	S	2764	GTACAAGAGTAAAGACACCCACCAGCCAGAGTTACAGGTAAGGTCTCGAG	1	+	138524505-138524544:138524545-138524554	1qE4	Mus musculus zinc finger protein 281 (Zfp281), mRNA.				MGC7737; MGC70044	MGC7737; MGC70044
Mus musculus	RefSeq	ILMN_185525	ILMN_196039	YLPM1	NM_178363.3	NM_178363.3		56531	146134506	NM_178363.3	Ylpm1	NP_848140.3	ILMN_1256972	000360438	S	2880	CTCAACAAGAGCCAACCAAAAGCCAAGTCTCGGAAGGGCCCGTAGAGCCC				12qD2	Mus musculus YLP motif containing 1 (Ylpm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Zap3; ZAP; A930013E17Rik; AI851834	Zap3; ZAP; A930013E17Rik; AI851834
Mus musculus	RefSeq	ILMN_196039	ILMN_196039	YLPM1	NM_178363.3	NM_178363.3		56531	146134506	NM_178363.3	Ylpm1	NP_848140.3	ILMN_1248384	006250754	S	6674	GTCTGGAAGCTTCTTGTGTCTCCACGTTTCAATTTTGTTTTGTTTTACCA				12qD2	Mus musculus YLP motif containing 1 (Ylpm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Zap3; ZAP; A930013E17Rik; AI851834	Zap3; ZAP; A930013E17Rik; AI851834
Mus musculus	RefSeq	ILMN_185080	ILMN_185080	ZFP113	NM_019747.3	NM_019747.3		56314	34328522	NM_019747.3	Zfp113	NP_062721.2	ILMN_2423988	001770114	S	3195	TCACAAAATTATGGAGCCAATCATCCAGGCTCCTTTAGCACTTGTTGCCA	5	-	138584099-138584148	5qG2	Mus musculus zinc finger protein 113 (Zfp113), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4732456B05Rik; KIAA4229; mKIAA4229	4732456B05Rik; KIAA4229; mKIAA4229
Mus musculus	RefSeq	ILMN_185080	ILMN_185080	ZFP113	NM_019747.3	NM_019747.3		56314	34328522	NM_019747.3	Zfp113	NP_062721.2	ILMN_2439322	000830348	S	4496	CCAAGGAACTATTTATGTAACTTATTTAGACAGGTGGGTTTTTCCCCCTC	5	-	138582798-138582847	5qG2	Mus musculus zinc finger protein 113 (Zfp113), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4732456B05Rik; KIAA4229; mKIAA4229	4732456B05Rik; KIAA4229; mKIAA4229
Mus musculus	RefSeq	ILMN_221029	ILMN_251162	4933412E24RIK	XM_976287.1	XM_976287.1		71088	94399002	XM_976287.1	4933412E24Rik	XP_981381.1	ILMN_2730110	006400441	S	1469	GGCTGTCCCCGTTGTCCAGAGTTACAGAAGGAAATAGAGGACCTCAGGAA				15qD1	PREDICTED: Mus musculus RIKEN cDNA 4933412E24 gene (4933412E24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_249319	ILMN_249319	ACSM3	NM_212442.2	NM_212442.2		20216	85810991	NM_212442.2	Acsm3	NP_997607.2	ILMN_3111685	003170270	A	1763	TCCTTCCATCGCAGAGTCAGCTGTTGTCAGCAGTCCAGACCCCATCAGAG	7	+	126924527-126924576	7qF2	Mus musculus acyl-CoA synthetase medium-chain family member 3 (Acsm3), transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of a long-chain carboxylic acid to an acceptor, coupled to the hydrolysis of ATP [goid 15645] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	Sa; Sah	Sa; Sah
Mus musculus	RefSeq	ILMN_210904	ILMN_249319	ACSM3	NM_212442.2	NM_212442.2		20216	85810991	NM_212442.2	Acsm3	NP_997607.2	ILMN_1244261	001450195	S	2173	CATTATTGAATCCTTCTGCATTCATGTCAATGCTCCTGTAATCTGCCAAC	7	+	126928023-126928072	7qF2	Mus musculus acyl-CoA synthetase medium-chain family member 3 (Acsm3), transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of a long-chain carboxylic acid to an acceptor, coupled to the hydrolysis of ATP [goid 15645] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	Sa; Sah	Sa; Sah
Mus musculus	RefSeq	ILMN_202370	ILMN_249319	ACSM3	NM_212442.2	NM_212442.2		20216	85810991	NM_212442.2	Acsm3	NP_997607.2	ILMN_2549092	006350435	S	548	CCATCTCAGCTCTTCTCCATTCCCATCTATCCACCAGAAGGCTGGATTGG	7	+	126912343-126912392	7qF2	Mus musculus acyl-CoA synthetase medium-chain family member 3 (Acsm3), transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of a long-chain carboxylic acid to an acceptor, coupled to the hydrolysis of ATP [goid 15645] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	Sa; Sah	Sa; Sah
Mus musculus	RefSeq	ILMN_211298	ILMN_211298	KSR1	NM_013571.1	NM_013571.1		16706	7305214	NM_013571.1	Ksr1	NP_038599.1	ILMN_2849036	006860465	S	3795	AGACCTCTGTGTTCATTCCTATGAGCTGGAGGGGCTGGACTGGGTGGGGT	11	-	78831239-78831288	11qB5	Mus musculus kinase suppressor of ras 1 (Ksr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RSU2; hb; AW492498; Ksr; D11Bhm184e; D11Bhm183e; B-KSR1	RSU2; hb; AW492498; Ksr; D11Bhm184e; D11Bhm183e; B-KSR1
Mus musculus	RefSeq	ILMN_215027	ILMN_215027	DRP2	NM_010078.2	NM_010078.2		13497	142345112	NM_010078.2	Drp2	NP_034208.1	ILMN_2654700	001090576	S	3668	CAGAGCTTCTCTGGTGAAGGAACAATTCACTGTAGATGTGCTTCCACCCG	X	+	130987854-130987903	XqE3	Mus musculus dystrophin related protein 2 (Drp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AW495265; MGC159050; MGC159048	AW495265; MGC159050; MGC159048
Mus musculus	Riken	ILMN_203378	ILMN_203378	STX8	ri|9430088M01|PX00111G12|AK035105|1495					AK035105	Stx8		ILMN_2556850	003460719	S	901	GGGACACAGGTAAATGTCCCTAGTTTGGGAGCTTTGGGGGTAGAGTGTGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185446	ILMN_185446	HIST2H2AA1	scl22866.1_233				20799906	NM_013549	Hist2h2aa1		ILMN_1228849	001170546	S	18	CGGCAAGAGTGTAGCACTAGGATTTTGGGTTGAAGCTAGGTAGGCAGTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185446	ILMN_185446	HIST2H2AA1	scl22866.1_233				20799906	NM_013549	Hist2h2aa1		ILMN_2751948	007150356	S	524	ATAAAGAGTTGTGTCACGGTAGCCGGTCTTGGTGGCCTTTCCTGGCCCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199167	ILMN_241221	LOC632561	XM_906724.2	XM_906724.2		632561	94389871	XM_906724.2	LOC632561	XP_911817.1	ILMN_1245894	004540279	S	4	GCGACCAGCAGGAGGCTGATGAAGGACAACCCTCTATATGATAAGGGAGC	11	+	3902445-3902494		PREDICTED: Mus musculus similar to Ubiquitin-conjugating enzyme E2 L3 (Ubiquitin-protein ligase L3) (Ubiquitin carrier protein L3) (UbcM4) (LOC632561), mRNA.					
Mus musculus	RefSeq	ILMN_216308	ILMN_225719	2010107H07RIK	XM_909437.2	XM_909437.2		66487	94396806	XM_909437.2	2010107H07Rik	XP_914530.2	ILMN_2669608	000020692	S	179	GAGTGCCCGGCAAGCAGCGATTCGGCATCTACAGATTCCTGCCCTTCTTT					PREDICTED: Mus musculus RIKEN cDNA 2010107H07 gene (2010107H07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211365	ILMN_211365	PTPN5	NM_013643.1	NM_013643.1		19259	7305424	NM_013643.1	Ptpn5	NP_038671.1	ILMN_1217804	002490619	S	2819	AACCCCAAAGATCTGAGCCCTGAGGGGGGCCTCCAAGAGTAGGATGTGGA	7	-	54333433-54333482	7qB4	Mus musculus protein tyrosine phosphatase, non-receptor type 5 (Ptpn5), mRNA.		The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IMP]	Step	Step
Mus musculus	Riken	ILMN_203591	ILMN_203591	6030495H03RIK	ri|6030495H03|PX00058G08|AK031711|3543					AK031711	6030495H03Rik		ILMN_2558471	003890270	S	2134	ACAAGTGTATGTGCTCATGGGGGTGGATTCTGGGTTGCAGCTGGAGGTGG										
Mus musculus	RefSeq	ILMN_228837	ILMN_228837	MIER1	NM_027696.2	NM_027696.2		71148	84872226	NM_027696.2	Mier1	NP_081972.2	ILMN_3143748	006760070	A	4270	GCCTTCAGGAGTAGGGATGTAGCTCAGTAGTTTGACTGTTTTGCCCAACG	4	+	102837866-102837915	4qC6	Mus musculus mesoderm induction early response 1 homolog (Xenopus laevis (Mier1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4933425I22Rik; mKIAA1610; MGC107532; 5830411K19Rik	4933425I22Rik; mKIAA1610; MGC107532; 5830411K19Rik
Mus musculus	RefSeq	ILMN_228837	ILMN_228837	MIER1	NM_027696.2	NM_027696.2		71148	84872226	NM_027696.2	Mier1	NP_081972.2	ILMN_3065779	000160731	I	62	TGGTGGCTCGATTCTCCCAGTGCCTGGCTGAGTTTCGGACGTGGTTAAGA	4	+	102788171-102788220	4qC6	Mus musculus mesoderm induction early response 1 homolog (Xenopus laevis (Mier1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4933425I22Rik; mKIAA1610; MGC107532; 5830411K19Rik	4933425I22Rik; mKIAA1610; MGC107532; 5830411K19Rik
Mus musculus	MEEBO	ILMN_212982	ILMN_212982	LOC232065	IGKV8-19_Y15980_Ig_kappa_variable_8-19_9	XM_132611.2			38093912	XM_132611.2	LOC232065		ILMN_2632262	001710446	S	17	GGTCCTCATGTCCCTGCTGTTCTGGGTATCTGGTACCTGTGGGGACATTG										
Mus musculus	RefSeq	ILMN_188945	ILMN_236366	FGR	NM_010208.3	NM_010208.3		14191	142344961	NM_010208.3	Fgr	NP_034338.2	ILMN_1244821	005690041	S	3016	CCTCTGTGGAGAAGCTGGTAGCTGACATGCCTCTGTTTGGAAACCAGGAG	4	+	132557504-132557553	4qD2.3	Mus musculus Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog (Fgr), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212843	ILMN_212843	NT5C2	NM_029810.2	NM_029810.2		76952	31560043	NM_029810.2	Nt5c2	NP_084086.2	ILMN_2788065	000870041	S	2433	TGGGGAATGTACCTGAAGAGTACAGAGGAGCAAGTTCCCAGAGCAGCAGC	19	-	46941385-46941434	19qC3	Mus musculus 5'-nucleotidase, cytosolic II (Nt5c2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]	cN-II; 2010002I23Rik; NT5B; PNT5; GMP	cN-II; 2010002I23Rik; NT5B; PNT5; GMP
Mus musculus	MEEBO	ILMN_189678	ILMN_189678	AGL	scl0077559.1_65				51708388	XM_131166	Agl		ILMN_2463423	002030164	S	4	GATCCCAGCCACTCCAAGGTAGAGTCTGTGTATGGATGCGTCTGCCGAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Intracellular foci at which aggregated proteins have been sequestered [goid 16234] [evidence IDA]	The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IDA]	Catalysis of the cleavage of branch points in branched glycogen polymers [goid 4133] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any polysaccharide [goid 30247] [evidence IDA]; Interacting selectively with any polysaccharide [goid 30247] [evidence IMP]; Interacting selectively and non-covalently with a polymer of ubiqutin [goid 31593] [evidence IDA]; Interacting selectively and non-covalently with a polymer of ubiqutin [goid 31593] [evidence IMP]		
Mus musculus	RefSeq	ILMN_214268	ILMN_214268	PHB2	NM_007531.2	NM_007531.2		12034	126723335	NM_007531.2	Phb2	NP_031557.2	ILMN_1224868	007000019	S	1178	TCTTGGATTAAGGAAGACTGAGACCAGCCCTTTCAGAGGCTTTCCTCCTT	6	+	124661780-124661829	6qF2	Mus musculus prohibitin 2 (Phb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BAP; Bcap37; REA; Bap37; AU044498	BAP; Bcap37; REA; Bap37; AU044498
Mus musculus	RefSeq	ILMN_200127	ILMN_200127	LOC385612	XM_358786.1	XM_358786.1			38080551	XM_358786.1	LOC385612		ILMN_1213610	000840632	S	474	GACCGAGCCATCTCTGAGCTCAGAAAAAGGCATCATAGCTGCGAATGCCC										
Mus musculus	Riken	ILMN_204875	ILMN_204875	A230010G09RIK	ri|A230010G09|PX00126F16|AK038433|1960					AK038433	A230010G09Rik		ILMN_1243068	000240647	S	1641	TTCAGTTAACAACACGGGGACCAACACACCTGCCAGCCTACCTGCCAGCC										
Mus musculus	RefSeq	ILMN_217986	ILMN_217986	IGSF5	NM_028078.2	NM_028078.2		72058	142348330	NM_028078.2	Igsf5	NP_082354.1	ILMN_1235512	004040162	S	625	ACATGAGGACAAACAAAGCAGATCCGGAGACAAAGTTAAAAAGTGGAAAG	16	+	96617987-96618036	16qC4	Mus musculus immunoglobulin superfamily, member 5 (Igsf5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IDA]	Jam4; 2010003D20Rik; JCAM	Jam4; 2010003D20Rik; JCAM
Mus musculus	RefSeq	ILMN_238389	ILMN_238389	SLC16A3	NM_030696.3	NM_030696.3		80879	84579883	NM_030696.3	Slc16a3	NP_109621.1	ILMN_3162980	004040228	I	37	CCTAACTAGGGAAGACAGCTGCCACAGCCACACAATAGCCCAGGCTGAGG	11	+	120809834-120809883	11qE2	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 3 (Slc16a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism [goid 15355] [evidence IEA]	Mct4; Mct3	Mct4; Mct3
Mus musculus	RefSeq	ILMN_219955	ILMN_219955	OLFR866	NM_146558.1	NM_146558.1		258551	22129524	NM_146558.1	Olfr866	NP_666769.1	ILMN_2715690	006770292	S	554	CCCAACTCCTTAATCTTGCTTGTACTAACACACTCAGCAGTAACATAGTA	9	-	19831777-19831826	9qA3	Mus musculus olfactory receptor 866 (Olfr866), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR145-5	MOR145-5
Mus musculus	RefSeq	ILMN_200914	ILMN_200914	LOC386560	XM_207645.2	XM_207645.2			38087011	XM_207645.2	LOC386560		ILMN_2540448	003890307	S	144	TTTCCAGATTACTATCCACCATCCTATATATCTGAAATTCAATATTTCTT										
Mus musculus	Riken	ILMN_204673	ILMN_204673	MBNL	ri|A130089K06|PX00126C22|AK038242|4315					AK038242	Mbnl		ILMN_2566778	007330524	S	3866	CAAGCATCCTGGACCAAGCTCATAAGCTCATATGTAGTCTGTGCCTTAAG										
Mus musculus	RefSeq	ILMN_225600	ILMN_225600	OLFR462	NM_146411.1	NM_146411.1		258406	33239009	NM_146411.1	Olfr462	NP_666523.1	ILMN_2875857	002470215	S	429	ACTAGTGGTGACTGCATGGGTTGTGGGATTTGTCCACTCGATTGTCCAGC	11	-	87702918-87702967	11qC	Mus musculus olfactory receptor 462 (Olfr462), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR240-3; MGC123553	MOR240-3; MGC123553
Mus musculus	RefSeq	ILMN_224037	ILMN_235471	CKMT1	NM_009897.2	NM_009897.2		12716	118129846	NM_009897.2	Ckmt1	NP_034027.1	ILMN_2773537	004610674	S	1516	TAACAGTGGCCTAGTCTACTTGCCCTGGACCTGCCTCTCTCCCTGTCCTA	2	+	121189400-121189449	2qE5	Mus musculus creatine kinase, mitochondrial 1, ubiquitous (Ckmt1), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + creatine = ADP + phosphocreatine [goid 4111] [evidence IEA]	ScCKmit; UbCKmit; mi-CK; Mt-CK	ScCKmit; UbCKmit; mi-CK; Mt-CK
Mus musculus	RefSeq	ILMN_241163	ILMN_241163	4930432O21RIK	NM_001025373.1	NM_001025373.1		74670	70778923	NM_001025373.1	4930432O21Rik	NP_001020544.1	ILMN_3006178	006960438	S	2141	GTGGGGAAGCCAGAAAAAATGTGATATTCTATGACAGTTCCTTGGAAACT	17	+	21698672-21698721	17qA3.3	Mus musculus RIKEN cDNA 4930432O21 gene (4930432O21Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188634	ILMN_241163	4930432O21RIK	NM_001025373.1	NM_001025373.1		74670	70778923	NM_001025373.1	4930432O21Rik	NP_001020544.1	ILMN_1214239	006040379	S	2463	CTTTTGGCTTTGACCACTAACTCCTTGCCCATACTCCTATGTGTAACTCC	17	+	21698994-21699043	17qA3.3	Mus musculus RIKEN cDNA 4930432O21 gene (4930432O21Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220802	ILMN_220802	OLFR678	NM_146758.1	NM_146758.1		258753	22129332	NM_146758.1	Olfr678	NP_666969.1	ILMN_1233983	003460343	S	615	CTCAGTGGGATACATTGATCTGTCTGTGATTGGATTTTCCTACATCCGGA	7	+	112218597-112218646	7qE3	Mus musculus olfactory receptor 678 (Olfr678), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR32-5; MGC157543	MOR32-5; MGC157543
Mus musculus	RefSeq	ILMN_198087	ILMN_198087	LOC270453	XM_195391.2	XM_195391.2			38081780	XM_195391.2	LOC270453		ILMN_1223344	004040100	S	305	GGCAGGGCAGCAATAAAACTGTCCATCACTTCCTCCTTCAGTTCATCATT										
Mus musculus	Riken	ILMN_202299	ILMN_202299	4933416G09RIK	ri|4933416G09|PX00020P09|AK016832|1656					AK016832	4933416G09Rik		ILMN_1225702	004490368	S	1283	CCTGGGCTGTCATTGTGTTTCCCAGGATGGCCTTATATGCAGTTTGTCGC										
Mus musculus	RefSeq	ILMN_217023	ILMN_217023	IL1R1	NM_008362.2	NM_008362.2		16177	118130781	NM_008362.2	Il1r1	NP_032388.1	ILMN_1231125	006020196	S	4646	AGATGCCAAATGTTATCTATCACAAACCACAAAATTTATGTACAGTGCAT	1	+	40372929-40372978	1qB	Mus musculus interleukin 1 receptor, type I (Il1r1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4909] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IDA]	CD121b; MGC129154; CD121a; Il1r-1	CD121b; MGC129154; CD121a; Il1r-1
Mus musculus	RefSeq	ILMN_200348	ILMN_200348	LOC386273	XM_359152.1	XM_359152.1			38081390	XM_359152.1	LOC386273		ILMN_2538446	004480039	S	17	CAATGGAGTACTACTCAGCTAATCAAAAGAATGAATTTATGAAATTCCTT										
Mus musculus	RefSeq	ILMN_208832	ILMN_208832	PCDHGB5	NM_033577.1	NM_033577.1		93702	18087738	NM_033577.1	Pcdhgb5	NP_291055.1	ILMN_2589952	000060491	S	2292	ATGTAGTGAGCCATTAAGTTCTGGACAAGGCCTTCTTTGCCCTGAGTCAT	18	+	37893099-37893148	18qB3	Mus musculus protocadherin gamma subfamily B, 5 (Pcdhgb5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215510	ILMN_242445	LCN12	NM_029958.1	NM_029958.1		77701	58037498	NM_029958.1	Lcn12	NP_084234.1	ILMN_2660461	000050746	S	630	TCTGCTGAAGAAGGAACAGGTTCCTGCCAGTAGAGCCTCACCCTGCCTCT	2	-	25346401-25346443:25346444-25346450	2qA3	Mus musculus lipocalin 12 (Lcn12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC130532; 9230102M18Rik	MGC130532; 9230102M18Rik
Mus musculus	RefSeq	ILMN_222197	ILMN_229063	1700027L20RIK	XM_906114.3	XM_906114.3		69453	149240608	XM_906114.3	1700027L20Rik	XP_911207.3	ILMN_2746177	005720132	S	1685	GCCTCTGCAACAGAAGTTAGCGGCTATTCAGCGAGCGCATGCTTGGATCC				1qD	PREDICTED: Mus musculus RIKEN cDNA 1700027L20 gene (1700027L20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215057	ILMN_215057	RNF135	NM_028019.1	NM_028019.1		71956	21312627	NM_028019.1	Rnf135	NP_082295.1	ILMN_2820379	006650088	S	1859	GACTGGTAAGAGGGAGTGCTCCTGGACCCTGCTCGTGTGCCTTTTTCTAC	11	+	80015848-80015897	11qB5	Mus musculus ring finger protein 135 (Rnf135), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC13061; 2410006N06Rik; 0610037N03Rik; RP23-345E8.1	MGC13061; 2410006N06Rik; 0610037N03Rik; RP23-345E8.1
Mus musculus	RefSeq	ILMN_215057	ILMN_215057	RNF135	NM_028019.1	NM_028019.1		71956	21312627	NM_028019.1	Rnf135	NP_082295.1	ILMN_2820383	000770564	S	1749	CCCCCAGTTAAAAGTCTAGCCCAACAGTATAGCTGGGTGAACATCTCTAG	11	+	80015738-80015787	11qB5	Mus musculus ring finger protein 135 (Rnf135), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC13061; 2410006N06Rik; 0610037N03Rik; RP23-345E8.1	MGC13061; 2410006N06Rik; 0610037N03Rik; RP23-345E8.1
Mus musculus	RefSeq	ILMN_215458	ILMN_215458	SLU7	NM_148673.3	NM_148673.3		193116	39812155	NM_148673.3	Slu7	NP_683514.2	ILMN_1237003	002450193	S	102	CGGACTGTTGCAGTAGCTGACTGTGATTTGCTTCATGCCCTAGCAGAGGC	11	+	43249868-43249917	11qA5-qB1.1	Mus musculus SLU7 splicing factor homolog (S. cerevisiae) (Slu7), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AU018913; D3Bwg0878e; RP23-26M1.8; MGC31026; D11Ertd730e	AU018913; D3Bwg0878e; RP23-26M1.8; MGC31026; D11Ertd730e
Mus musculus	RefSeq	ILMN_214091	ILMN_214091	PANK4	NM_172990.2	NM_172990.2		269614	142366380	NM_172990.2	Pank4	NP_766578.1	ILMN_2644140	001740500	S	2320	GGTTCCTACCAAGTGAGATACCCACTCTGCCAGACGTGTCTGCATATCCC	4	+	154354802-154354817:154354818-154354851	4qE2	Mus musculus pantothenate kinase 4 (Pank4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15937] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + pantothenate = ADP + D-4'-phosphopantothenate [goid 4594] [evidence IEA]	D030031I12Rik; R75150	D030031I12Rik; R75150
Mus musculus	RefSeq	ILMN_196748	ILMN_196748	HIST1H2AE	NM_178187.3	NM_178187.3		319166	141803099	NM_178187.3	Hist1h2ae	NP_835494.1	ILMN_2751102	004860386	S	628	TTCAATGGCATAAGAAAATTCAACCTGTCAATTGTCCCCCAGCTTCTCCA	13	-	23662412-23662461	13qA3.1	Mus musculus histone cluster 1, H2ae (Hist1h2ae), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1190022L06	1190022L06
Mus musculus	RefSeq	ILMN_218022	ILMN_248914	1700112E06RIK	XM_908132.2	XM_908132.2		76633	94396667	XM_908132.2	1700112E06Rik	XP_913225.1	ILMN_2690564	006590382	S	806	CTATGGAAGAAATTCAGAGGGTAACAGGTTTATCCGAGATGATCAGCTCT				14qA3	PREDICTED: Mus musculus RIKEN cDNA 1700112E06 gene, transcript variant 4 (1700112E06Rik), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_257259	ILMN_257259	MRGPRA2	NM_153101.1	NM_153101.1		235712	23346530	NM_153101.1	Mrgpra2	NP_694741.1	ILMN_2904108	005960709	S	900	GCTGTGCCAACCCCATCATCTACTTCTTCGTGGGCTCTTTCAGACATCAG	7	-	47332113-47332162	7qB4	Mus musculus MAS-related GPR, member A2 (Mrgpra2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgA2	MrgA2
Mus musculus	RefSeq	ILMN_193016	ILMN_193016	TREM3	NM_021407.1	NM_021407.1		58218	10946761	NM_021407.1	Trem3	NP_067382.1	ILMN_2915303	004290035	S	818	TTGAGAGAGATTTGGACCTTTGGTGGAGCAGTTAAGCAGGACCCACAGAG	17	+	47724273-47724322	17qC	Mus musculus triggering receptor expressed on myeloid cells 3 (Trem3), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BB134760	BB134760
Mus musculus	Riken	ILMN_205025	ILMN_205025	MAD1L1	ri|A430080F23|PX00138C24|AK040246|738					AK040246	Mad1l1		ILMN_1250185	004260154	S	500	CCGTGAGAAGAGTGCTCCATAACTGCCATCCCAGTGCTAGTGATGACTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]			
Mus musculus	Riken	ILMN_204865	ILMN_204865	A130091L04RIK	ri|A130091L04|PX00125B04|AK038273|1572					AK038273	A130091L04Rik		ILMN_1240127	002680242	S	1283	CAGATGACTGGATCCCATGGTGGCTGGAGAATATGTGACCCCCGAGCCAC										
Mus musculus	RefSeq	ILMN_244375	ILMN_244375	ANG	NM_007447.2	NM_007447.2		11727	40254650	NM_007447.2	Ang	NP_031473.1	ILMN_2875251	005360537	S	419	CCATGCCAGTACCGAGCCTCTGCAGGGTTCAGACATGTTGTTATTGCCTG	14	+	51721418-51721467	14qC1	Mus musculus angiogenin, ribonuclease, RNase A family, 5 (Ang), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A stable heterodimer of angiogenin and placental ribonuclease inhibitor; interaction between angiogenin and PRI prevents angiogenin binding to its receptor to stimulate angiogenesis [goid 32311] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence ISO]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence NAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IC ]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IDA]	AI385586; Ang; Rnase5; Rnase5a; Ang1	AI385586; Ang; Rnase5; Rnase5a; Ang1
Mus musculus	RefSeq	ILMN_216896	ILMN_216896	OPTN	NM_181848.4	NM_181848.4		71648	133893033	NM_181848.4	Optn	NP_862896.1	ILMN_2676606	001850543	S	1609	GTGCCGACACGGGGCAAGAACCAGTGACTCTGACCAGCAGACTTACCTGT	2	-	4945121-4945170	2qA1	Mus musculus optineurin (Optn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FIP2; HYPL; NRP; 4930441O07Rik	FIP2; HYPL; NRP; 4930441O07Rik
Mus musculus	RefSeq	ILMN_214323	ILMN_214323	OLFR568	NM_147091.2	NM_147091.2		259095	112983540	NM_147091.2	Olfr568	NP_667302.2	ILMN_2646854	003450398	S	765	CAGCTTGTCTCTTGTACACCGCTACGGCCATTCAGCACCCGCCTTTGTCC	7	+	110026400-110026449	7qE3	Mus musculus olfactory receptor 568 (Olfr568), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR14-11; MOR14-3	MOR14-11; MOR14-3
Mus musculus	RefSeq	ILMN_218456	ILMN_218456	LHCGR	NM_013582.2	NM_013582.2		16867	118129900	NM_013582.2	Lhcgr	NP_038610.1	ILMN_2696040	004010437	S	2215	CAGGTGAATTGAAACCTGCTTCAAAGGGTGGCCCAAGACACTTGGTGACA	17	-	89141177-89141226	17qE4-qE5	Mus musculus luteinizing hormone/choriogonadotropin receptor (Lhcgr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with lutropin-choriogonadotropic hormone to initiate a change in cell activity [goid 4964] [evidence TAS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]	Lhr; Gpcr19-rs1; LH-R	Lhr; Gpcr19-rs1; LH-R
Mus musculus	RefSeq	ILMN_218456	ILMN_218456	LHCGR	NM_013582.2	NM_013582.2		16867	118129900	NM_013582.2	Lhcgr	NP_038610.1	ILMN_2710338	003610241	S	2352	GTTGTTGTCATTTTCCATGTCTCTTGATCTTTTTCACTTCAATCTGTGAT	17	-	89141040-89141089	17qE4-qE5	Mus musculus luteinizing hormone/choriogonadotropin receptor (Lhcgr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with lutropin-choriogonadotropic hormone to initiate a change in cell activity [goid 4964] [evidence TAS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]	Lhr; Gpcr19-rs1; LH-R	Lhr; Gpcr19-rs1; LH-R
Mus musculus	RefSeq	ILMN_197597	ILMN_197597	LOC330553	XM_284311.2	XM_284311.2			38076750	XM_284311.2	LOC330553		ILMN_1237324	000240056	S	667	GCAATCCCACCAGCAATGGAGGAGTGTCCCTCTTTCTGCACATACTCGCC										
Mus musculus	MEEBO	ILMN_208860	ILMN_208860	BRE	scl27946.19.1_69				21617850	NM_144541	Bre		ILMN_2769256	004920368	S	1257	TCAGCGCTCGGGCTGCTTGCTGGAAACTGCTCGGAATGTCTTCATGGCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IDA]		
Mus musculus	Riken	ILMN_206898	ILMN_206898	SLC23A1	ri|E030032B14|PX00206P09|AK087175|1647					AK087175	Slc23a1		ILMN_1243306	004730167	S	1411	AGTCCGCAGCCTCACACAGGGTCTGCTTGGGCAGTGTTGGTCCTTCTGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211520	ILMN_211520	D1BWG0212E	NM_028043.2	NM_028043.2		52846	31542465	NM_028043.2	D1Bwg0212e	NP_082319.1	ILMN_2616638	004880408	S	2548	AATCCTTGCGCCCCTGTGGGAGTGACCCCCTCTGAACTAGAGAGCTGACT	1	+	39603104-39603153	1qB	Mus musculus DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed (D1Bwg0212e), mRNA.				2410015L18Rik; C40	2410015L18Rik; C40
Mus musculus	RefSeq	ILMN_211520	ILMN_211520	D1BWG0212E	NM_028043.2	NM_028043.2		52846	31542465	NM_028043.2	D1Bwg0212e	NP_082319.1	ILMN_2890284	001780369	S	2800	CAGTAGCCAGATGCAGATACTCCCAACCATTGGACTGAAGTTGGGGACCC	1	+	39603356-39603405	1qB	Mus musculus DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed (D1Bwg0212e), mRNA.				2410015L18Rik; C40	2410015L18Rik; C40
Mus musculus	RefSeq	ILMN_190824	ILMN_258373	CNOT2	NM_001037846.2	NM_001037846.2		72068	141801769	NM_001037846.2	Cnot2	NP_001032935.1	ILMN_1238313	006650167	S	2659	GGGGCTTCAAGACGTGAACTGAGACAATTCACTCTGGCTGTTTGAACAGC	10	-	115922313-115922362	10qD2	Mus musculus CCR4-NOT transcription complex, subunit 2 (Cnot2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650
Mus musculus	RefSeq	ILMN_251987	ILMN_251987	A130090K04RIK	NM_001033391.1	NM_001033391.1		320495	85701886	NM_001033391.1	A130090K04Rik	NP_001028563.1	ILMN_3162205	002190022	S	1040	CACATCCTAACCATGTTACCCGTCTCTGAGCCACATACTCATCTGTGGTC	10	+	3434864-3434913	10qA1	Mus musculus RIKEN cDNA A130090K04 gene (A130090K04Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	MEEBO	ILMN_209316	ILMN_209316	ANKRD6	scl0002747.1_30	NM_080471.2			19924301	NM_080471.2	Ankrd6		ILMN_1217993	002000600	S	2343	CGGTGTCCCAGGAGTTGGTTGTCACGCCCAAGGTGGACTTGCCTTTTTAG										
Mus musculus	MEEBO	ILMN_210389	ILMN_210389	GM1631	scl0381371.3_13				41235763	NM_201366	Gm1631		ILMN_2769930	000610672	S	314	GACCACCCTACAACCCAGGGAAATGGGTTCTTGTTCTAGCCTGGTGTTGG										
Mus musculus	RefSeq	ILMN_218379	ILMN_218379	MAGEA6	NM_020019.3	NM_020019.3		17142	115430104	NM_020019.3	Magea6	NP_064403.1	ILMN_2694973	007570243	S	1070	TGGATCTTGAGCAGATGCTCCAATTTCTCTGACCATTCTAGTGTACTGCC	X	-	151358636-151358685	XqF3	Mus musculus melanoma antigen, family A, 6 (Magea6), mRNA.				MGC130207; Mage-a6; MGC151279	MGC130207; Mage-a6; MGC151279
Mus musculus	RefSeq	ILMN_221100	ILMN_221100	SOCS5	NM_019654.2	NM_019654.2		56468	34328248	NM_019654.2	Socs5	NP_062628.2	ILMN_1231319	002710762	S	20	GAGGACGGGACGCGCGGGCGGTCGCGCTCGCCCTGTCGCTGACTGCGCTG	17	+	87507038-87507087	17qE4	Mus musculus suppressor of cytokine signaling 5 (Socs5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T-helper 1 cell differentiation [goid 45627] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell differentiation [goid 45629] [evidence IDA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IPI]; Stops, prevents or reduces the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19210] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA0671; mKIAA0671; 1810018L08Rik; Cish5	KIAA0671; mKIAA0671; 1810018L08Rik; Cish5
Mus musculus	RefSeq	ILMN_221100	ILMN_221100	SOCS5	NM_019654.2	NM_019654.2		56468	34328248	NM_019654.2	Socs5	NP_062628.2	ILMN_1240346	000270678	S	4080	ACCTGGAAGAGGAACCCCTTGAGGAAAGATAAGTCCATGCTGAGAGCTGG	17	+	87536611-87536660	17qE4	Mus musculus suppressor of cytokine signaling 5 (Socs5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T-helper 1 cell differentiation [goid 45627] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell differentiation [goid 45629] [evidence IDA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IPI]; Stops, prevents or reduces the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19210] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA0671; mKIAA0671; 1810018L08Rik; Cish5	KIAA0671; mKIAA0671; 1810018L08Rik; Cish5
Mus musculus	RefSeq	ILMN_186266	ILMN_226751	TMPO	NM_001080134.1	NM_001080134.1		21917	121949778	NM_001080134.1	Tmpo	NP_001073603.1	ILMN_2471359	000010181	S	866	GCCGCTAAAGGGCAGAGCCAAGACGCCAGTCACACTGAAGCAGAGAAGGA	10	-	90621506-90621555	10qC2	Mus musculus thymopoietin (Tmpo), transcript variant 6, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence ISO]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	5630400D24Rik; TP; AI195756; AI606875; AW214352; AW547477; LAP2	5630400D24Rik; TP; AI195756; AI606875; AW214352; AW547477; LAP2
Mus musculus	RefSeq	ILMN_210456	ILMN_210456	PRL3B1	NM_008865.3	NM_008865.3		18776	142350123	NM_008865.3	Prl3b1	NP_032891.1	ILMN_1256317	001170328	S	799	CCCCTTCTTTGGTGCCTTTCTAGATTGAGTTGTCATCTTACCCCCAAATA	13	+	27341472-27341521	13qA3.1	Mus musculus prolactin family 3, subfamily b, member 1 (Prl3b1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Pl2; Csh2; Pl-2; mplII; PL	Pl2; Csh2; Pl-2; mplII; PL
Mus musculus	RefSeq	ILMN_222928	ILMN_222928	LPCAT4	NM_207206.1	NM_207206.1		99010	46402174	NM_207206.1	Lpcat4	NP_997089.1	ILMN_2756891	004060008	S	1626	CCACTGCCCTGGCCAACGGGACTGTGCAGGCCCCCAAGCAGAAGGGAGAC	2	+	112086992-112087041	2qE3	Mus musculus lysophosphatidylcholine acyltransferase 4 (Lpcat4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IEA]	AI505034; Aytl3	AI505034; Aytl3
Mus musculus	RefSeq	ILMN_211200	ILMN_211200	EVI5	NM_007964.2	NM_007964.2		14020	111185904	NM_007964.2	Evi5	NP_031990.2	ILMN_2613546	004040017	S	5688	CCCTTCCCTCCAGAGAAGAGCTGACATGGTAATCCATTGGACATGCAAAG	5	-	108173925-108173974	5qF	Mus musculus ecotropic viral integration site 5 (Evi5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	NB4S	NB4S
Mus musculus	RefSeq	ILMN_184249	ILMN_226299	SET	NM_023871.3	NM_023871.3		56086	118130684	NM_023871.3	Set	NP_076360.1	ILMN_2665516	006480204	S	1797	TTAAATGTTGAAGTGTACAAGTTGCTTTGTTACAATAAAATCAGTGTGTA	2	+	29921746-29921795	2qB	Mus musculus SET translocation (Set), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		5730420M11Rik; AA407739; StF-IT-1; MGC118419; 2610030F17Rik	5730420M11Rik; AA407739; StF-IT-1; MGC118419; 2610030F17Rik
Mus musculus	RefSeq	ILMN_254862	ILMN_254862	SOHLH1	NM_001001714.1	NM_001001714.1		227631	48762517	NM_001001714.1	Sohlh1	NP_001001714.1	ILMN_2850324	007040176	S	1153	TGCTGGGGAGCTGTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGC	2	-	25698601-25698650	2qA3	Mus musculus spermatogenesis and oogenesis specific basic helix-loop-helix 1 (Sohlh1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	RP23-123F7.2; Nohlh; Gm110	RP23-123F7.2; Nohlh; Gm110
Mus musculus	RefSeq	ILMN_197204	ILMN_254862	SOHLH1	NM_001001714.1	NM_001001714.1		227631	48762517	NM_001001714.1	Sohlh1	NP_001001714.1	ILMN_1242183	001050050	S	1154	GCTGGGGAGCTGTCCTGTGCCTGGGTGTTGTATTTTGGGCTTGGTTTGCA	2	-	25698600-25698649	2qA3	Mus musculus spermatogenesis and oogenesis specific basic helix-loop-helix 1 (Sohlh1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	RP23-123F7.2; Nohlh; Gm110	RP23-123F7.2; Nohlh; Gm110
Mus musculus	RefSeq	ILMN_210879	ILMN_210879	RP9	NM_018739.1	NM_018739.1		55934	9055299	NM_018739.1	rp9	NP_061209.1	ILMN_2610127	006760017	S	588	TTAAAGCAGTTACTGGAGGACTCCACCTCAGATGACGACGGGAGCAGCTC	9	-	22253226-22253275	9qA3	Mus musculus retinitis pigmentosa 9 (human) (rp9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISO]; A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex [goid 5785] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC106978; MGC144398; Rp9h; MGC144397; PAP-1	MGC106978; MGC144398; Rp9h; MGC144397; PAP-1
Mus musculus	RefSeq	ILMN_210879	ILMN_210879	RP9	NM_018739.1	NM_018739.1		55934	9055299	NM_018739.1	rp9	NP_061209.1	ILMN_2984935	001850162	S	755	TGAGAGCTCTGACTCAGAGTGACAGCACCACCCACAGGCCAAAGGACAGA	9	-	22253059-22253099:22253100-22253108	9qA3	Mus musculus retinitis pigmentosa 9 (human) (rp9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISO]; A transmembrane heterodimeric protein located in the membrane of the rough endoplasmic reticulum. Both subunits contain GTPase domains with which signal recognition particle interacts. In the presence of GTP and SRP receptor, SRP is released from the ribosome-nascent chain complex [goid 5785] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC106978; MGC144398; Rp9h; MGC144397; PAP-1	MGC106978; MGC144398; Rp9h; MGC144397; PAP-1
Mus musculus	RefSeq	ILMN_218752	ILMN_218752	C330011K17RIK	NM_177712.2	NM_177712.2		238692	31343227	NM_177712.2	C330011K17Rik	NP_808380.1	ILMN_2699774	004230091	S	2598	TTCTGCTGCTATTAGGAAATTTTCTAATGTGAAGATTGATTAAATATTCT	13	-	67940107-67940156	13qB3	Mus musculus RIKEN cDNA C330011K17 gene (C330011K17Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rslcan15; MGC91167	Rslcan15; MGC91167
Mus musculus	RefSeq	ILMN_200762	ILMN_200762	LOC384536	XM_357698.1	XM_357698.1			38085948	XM_357698.1	LOC384536		ILMN_1229980	005910307	S	61	TGCTGTAAGACACAGATGACTCTGTGGGACACAGTTAAGGAAACTCGAGC										
Mus musculus	RefSeq	ILMN_200777	ILMN_311798	LOC100045136	XM_001473739.1	XM_001473739.1		100045136	149270892	XM_001473739.1	LOC100045136	XP_001473789.1	ILMN_1256250	002690390	S	631	TCCCCAGACTCCCCGTTCTCATCCAGAGCTCTTCAGATATGGACCAGGCT					PREDICTED: Mus musculus hypothetical protein LOC100045136 (LOC100045136), mRNA.					
Mus musculus	RefSeq	ILMN_220708	ILMN_220708	ADAM18	NM_010084.1	NM_010084.1		13524	6753683	NM_010084.1	Adam18	NP_034214.1	ILMN_2942654	004860731	S	2227	TTGCACCAGAAATCGGCCAAGGAAGCTAGCAGTTGATGGACCCAAGGAGG	8	-	25712800-25712849	8qA2	Mus musculus a disintegrin and metallopeptidase domain 18 (Adam18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence ISS]	Dtgn3; Adam27	Dtgn3; Adam27
Mus musculus	RefSeq	ILMN_201246	ILMN_316241	1700124P09RIK	XM_001481019.1	XM_001481019.1		76998	149260373	XM_001481019.1	1700124P09Rik	XP_001481069.1	ILMN_2541614	005690129	S	241	CGTTTACCGAACGTGGCAAGAACACTCCAAGACCCGGGCAAATCCACGAG	9	-	109691871-109691920	9qF2	PREDICTED: Mus musculus RIKEN cDNA 1700124P09 gene, transcript variant 1 (1700124P09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210365	ILMN_316241	1700124P09RIK	XM_001481019.1	XM_001481019.1		76998	149260373	XM_001481019.1	1700124P09Rik	XP_001481069.1	ILMN_2604873	007100367	S	1382	GGTCATGACACCTGGTTTCTGATGGCATATGCCTTGAATATCTGCTCTTG	9	-	109668619-109668668	9qF2	PREDICTED: Mus musculus RIKEN cDNA 1700124P09 gene, transcript variant 1 (1700124P09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_184239	ILMN_259477	LRRC7	XM_993731.1	XM_993731.1		242274	94370435	XM_993731.1	Lrrc7	XP_998825.1	ILMN_1257783	001340327	S	5709	GGTGGCGGGAAAGGCTTAATGCTTTAATGTTCTGTTTCCTCGGGTTATGT				3qH4	PREDICTED: Mus musculus leucine rich repeat containing 7, transcript variant 5 (Lrrc7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_219016	ILMN_219016	D030051N19RIK	scl0003379.1_10	NM_172669.2			34328380	NM_172669.2	D030051N19Rik		ILMN_2760593	007330332	S	4748	GCTCACCAAATGCGGACACCTGTGGAGTGAAGGAAATAGCCTGCTTGCCT										
Mus musculus	RefSeq	ILMN_241818	ILMN_241818	TPM1	NM_024427.2	NM_024427.2		22003	31560029	NM_024427.2	Tpm1	NP_077745.2	ILMN_3007072	004060484	S	1463	AGCCACGCTGGTCTTCTGAGATTCCAAGTCCTTCCCCAGCTGACATGCCC	9	-	66821926-66821975	9qC	Mus musculus tropomyosin 1, alpha (Tpm1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; A form of the tropomyosin dimer found associated with actin and the troponin complex in muscle thin filaments [goid 5862] [evidence TAS]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]	AA986836; alpha-TM; Tmpa; Tpm-1	AA986836; alpha-TM; Tmpa; Tpm-1
Mus musculus	RefSeq	ILMN_209176	ILMN_209176	GKN2	NM_025467.1	NM_025467.1		66284	13384883	NM_025467.1	Gkn2	NP_079743.1	ILMN_2593257	006550379	S	561	CCATCTGTGGAGGAATTCACCTTTAAGATGGTCCATCAACTGGCTTCATC	6	+	87329272-87329297:87329298-87329321	6qD1	Mus musculus gastrokine 2 (Gkn2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			1810036H07Rik	1810036H07Rik
Mus musculus	Riken	ILMN_205726	ILMN_205726	9830141J12RIK	ri|9830141J12|PX00118P13|AK036614|2570					AK036614	9830141J12Rik		ILMN_1215653	004490048	S	2511	GGGTCTTGAAGTGGGTCAACTACCCTTATCCCCTGAGCCATTTCTCCAGC										
Mus musculus	MEEBO	ILMN_212075	ILMN_212075	MS4A7	scl52727.6_19	NM_027836.3			32129261	NM_027836.3	Ms4a7		ILMN_2622436	003290019	S	1451	TGCACAATCCTTTGCTTAAATATTAGACTTTACACATTCCAAGAACATTT										
Mus musculus	RefSeq	ILMN_214100	ILMN_214100	METAP2	NM_019648.3	NM_019648.3		56307	83779008	NM_019648.3	Metap2	NP_062622.1	ILMN_1241946	001030224	S	1503	CCCAAATATGACATACTATTAACAGCTGTAAAGGATGCCACTAATACTGG	10	-	93331618-93331667	10qC2	Mus musculus methionine aminopeptidase 2 (Metap2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	AU014659; Amp2; AI047573; Mnpep; A930035J23Rik; p67eIF2; MGC102452; AL024412; p67	AU014659; Amp2; AI047573; Mnpep; A930035J23Rik; p67eIF2; MGC102452; AL024412; p67
Mus musculus	RefSeq	ILMN_195009	ILMN_214100	METAP2	NM_019648.3	NM_019648.3		56307	83779008	NM_019648.3	Metap2	NP_062622.1	ILMN_1214609	002120162	S	218	ATTCCGGCTTCCAAAATTATCCCACGCTTCTCGACAGCTTCCCCGCGAGC	10	-	93352858-93352907	10qC2	Mus musculus methionine aminopeptidase 2 (Metap2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	AU014659; Amp2; AI047573; Mnpep; A930035J23Rik; p67eIF2; MGC102452; AL024412; p67	AU014659; Amp2; AI047573; Mnpep; A930035J23Rik; p67eIF2; MGC102452; AL024412; p67
Mus musculus	RefSeq	ILMN_214100	ILMN_214100	METAP2	NM_019648.3	NM_019648.3		56307	83779008	NM_019648.3	Metap2	NP_062622.1	ILMN_1235192	002000022	S	1676	AAATGGACATTCAATTGGGCCATATAGAATTCACGCTGGAAAAACGGTGC	10	-	93325709-93325758	10qC2	Mus musculus methionine aminopeptidase 2 (Metap2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	AU014659; Amp2; AI047573; Mnpep; A930035J23Rik; p67eIF2; MGC102452; AL024412; p67	AU014659; Amp2; AI047573; Mnpep; A930035J23Rik; p67eIF2; MGC102452; AL024412; p67
Mus musculus	RefSeq	ILMN_184605	ILMN_214100	METAP2	NM_019648.3	NM_019648.3		56307	83779008	NM_019648.3	Metap2	NP_062622.1	ILMN_1215761	000130435	S	3623	CTCCTTCCGGCCACTCAGGACACAAGGATGTCTGCTCCCAACAGTAGTAC	10	-	93322551-93322600	10qC2	Mus musculus methionine aminopeptidase 2 (Metap2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	AU014659; Amp2; AI047573; Mnpep; A930035J23Rik; p67eIF2; MGC102452; AL024412; p67	AU014659; Amp2; AI047573; Mnpep; A930035J23Rik; p67eIF2; MGC102452; AL024412; p67
Mus musculus	RefSeq	ILMN_214100	ILMN_214100	METAP2	NM_019648.3	NM_019648.3		56307	83779008	NM_019648.3	Metap2	NP_062622.1	ILMN_2668243	006370593	S	1530	GTAAAGGATGCCACTAATACTGGAATAAAGTGTGCTGGGATTGACGTTCG	10	-	93328228-93328248:93331612-93331640	10qC2	Mus musculus methionine aminopeptidase 2 (Metap2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	AU014659; Amp2; AI047573; Mnpep; A930035J23Rik; p67eIF2; MGC102452; AL024412; p67	AU014659; Amp2; AI047573; Mnpep; A930035J23Rik; p67eIF2; MGC102452; AL024412; p67
Mus musculus	RefSeq	ILMN_215319	ILMN_215319	USP45	NM_152825.2	NM_152825.2		77593	144922711	NM_152825.2	Usp45	NP_690038.1	ILMN_1254996	000520626	S	2429	GTGCAGGTGGTTCCAGAGTCAAGAGCCCTGAGTGCACAAGCTTATCTTCT	4	+	21761441-21761490	4qA3	Mus musculus ubiquitin specific petidase 45 (Usp45), mRNA. XM_920449 XM_920458		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AI843191; 3110003C05Rik; Gcap7; RP23-38K18.3; 4930550B20Rik	AI843191; 3110003C05Rik; Gcap7; RP23-38K18.3; 4930550B20Rik
Mus musculus	RefSeq	ILMN_187170	ILMN_215319	USP45	NM_152825.2	NM_152825.2		77593	144922711	NM_152825.2	Usp45	NP_690038.1	ILMN_1229425	004220382	S	3378	GTGTGTGTTAGTCTATAGGAAAAGTTTCTAGAACAGTCTGAACTAGTGCC	4	+	21762390-21762439	4qA3	Mus musculus ubiquitin specific petidase 45 (Usp45), mRNA. XM_920449 XM_920458		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AI843191; 3110003C05Rik; Gcap7; RP23-38K18.3; 4930550B20Rik	AI843191; 3110003C05Rik; Gcap7; RP23-38K18.3; 4930550B20Rik
Mus musculus	RefSeq	ILMN_215319	ILMN_215319	USP45	NM_152825.2	NM_152825.2		77593	144922711	NM_152825.2	Usp45	NP_690038.1	ILMN_1218164	007380292	S	5656	CTAAACCAAATATGTGCGATAAAATCAAGCTTTCAGCTAGCATCCATTGC	4	+	21764668-21764717	4qA3	Mus musculus ubiquitin specific petidase 45 (Usp45), mRNA. XM_920449 XM_920458		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AI843191; 3110003C05Rik; Gcap7; RP23-38K18.3; 4930550B20Rik	AI843191; 3110003C05Rik; Gcap7; RP23-38K18.3; 4930550B20Rik
Mus musculus	RefSeq	ILMN_210386	ILMN_242195	AY053573	NM_199313.1	NM_199313.1		380674	49227084	NM_199313.1	AY053573	NP_955017.1	ILMN_1213579	004290243	S	638	TGACTGAGAGTGAAAGATTATCATCAAACATCCAGGTGCTGTGGGACCAG	10	+	127280233-127280282	10qD3	Mus musculus cDNA sequence AY053573 (AY053573), mRNA.					
Mus musculus	RefSeq	ILMN_210610	ILMN_210610	IL20RA	NM_172786.1	NM_172786.1		237313	27370159	NM_172786.1	Il20ra	NP_766374.1	ILMN_2896547	000380343	S	1599	CCAGGCACCTGACAAGCCAGAGAAAGAAAATGAAAACTGTCTCACACGGT	10	+	19448980-19449029	10qA3	Mus musculus interleukin 20 receptor, alpha (Il20ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	E230031K19	E230031K19
Mus musculus	RefSeq	ILMN_217118	ILMN_217118	GATA3	NM_008091.2	NM_008091.2		14462	40254638	NM_008091.2	Gata3	NP_032117.1	ILMN_1248843	005900070	S	2241	GGCCTACATGCTCTGTGAATCAGTCCCTGTAATTGTTGTTTGTATGTATA	2	-	9779225-9779274	2qA1	Mus musculus GATA binding protein 3 (Gata3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [goid 48485] [evidence IMP]; The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is a transient excretory organ of the embryo [goid 1823] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-4 production [goid 32753] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42035] [evidence IDA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IDA]; The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42421] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Gata-3	Gata-3
Mus musculus	RefSeq	ILMN_217533	ILMN_217533	1700034H14RIK	NM_025969.1	NM_025969.1		67105	21313127	NM_025969.1	1700034H14Rik	NP_080245.1	ILMN_2897476	006270603	S	833	GCAAGGAACGGTACATGCAGAAGTGGAAGAGAACCCAGGGAGTGGCCAGT	18	-	85081919-85081938:85082027-85082056	18qE4	Mus musculus RIKEN cDNA 1700034H14 gene (1700034H14Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		2700002I20Rik	2700002I20Rik
Mus musculus	RefSeq	ILMN_200498	ILMN_200498	TNRC18	XM_355727.5	XM_355727.5		381742	149254658	XM_355727.5	Tnrc18	XP_355727.5	ILMN_1212933	003870554	S	398	GCACCTATGAGCCCACCACAGGCATGATCTTCTCCACGGACGGCGTGCCT	5	-	143201945-143201994	5qG2	PREDICTED: Mus musculus trinucleotide repeat containing 18 (Tnrc18), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_187072	ILMN_187072	1700001L05RIK	scl46898.3.1_4						1700001L05Rik		ILMN_2440921	006060402	S	17	GGATGATAGTGCCAACTGCTACTAGAAAGAGGATGAGACACTTAGACCAC										
Mus musculus	RefSeq	ILMN_222398	ILMN_222398	RAMP3	NM_019511.1	NM_019511.1		56089	9507030	NM_019511.1	Ramp3	NP_062384.1	ILMN_3152486	001740072	A	424	TGACTGTGGCTATGGCTGGCCTGGTGGTGTGGCGCAGCAAGCACACTGAT	11	+	6576681-6576730	11qA1	Mus musculus receptor (calcitonin) activity modifying protein 3 (Ramp3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IPI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA];  [goid 15027] [evidence IDA]	AI850306	AI850306
Mus musculus	RefSeq	ILMN_222398	ILMN_222398	RAMP3	NM_019511.1	NM_019511.1		56089	9507030	NM_019511.1	Ramp3	NP_062384.1	ILMN_3073644	000540170	I	1	TATCCCGCTGTTGCTGCAAGCCGGCTGCATCTTAGTTGGCCATGAAGACC	11	+	6558536-6558575:6558576-6558585	11qA1	Mus musculus receptor (calcitonin) activity modifying protein 3 (Ramp3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IPI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA];  [goid 15027] [evidence IDA]	AI850306	AI850306
Mus musculus	MEEBO	ILMN_189593	ILMN_189593	IGKV4-80_AJ231213_IG_KAPPA_VARIABLE_4-80_91	IGKV4-80_AJ231213_Ig_kappa_variable_4-80_91						IGKV4-80_AJ231213_Ig_kappa_variable_4-80_91		ILMN_2462623	000520524	S	15	TCTCTAGGGGAGGAGATCACCCTAACCTGCAGTGCCAGCTCGAGTGTAAG										
Mus musculus	RefSeq	ILMN_218020	ILMN_218020	FSTL5	NM_178673.3	NM_178673.3		213262	50054053	NM_178673.3	Fstl5	NP_848788.2	ILMN_2690540	002340192	S	3345	GTCCCGTCCACTGTTTAAAATCTTTTGTGCCTTGAAGGAAATGTCATGGA	3	+	76512507-76512556	3qE3	Mus musculus follistatin-like 5 (Fstl5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	9130207J01Rik	9130207J01Rik
Mus musculus	Riken	ILMN_204495	ILMN_204495	B230343B06RIK	ri|B230343B06|PX00160A16|AK046121|1203					AK046121	B230343B06Rik		ILMN_2565419	005130292	S	1090	GCCACCACACCCAGCCGTCGGCAGTTGCTGTAACTTTCCCAGACAGTTTG										
Mus musculus	RefSeq	ILMN_193969	ILMN_238204	SOCS1	NM_009896.2	NM_009896.2		12703	87044896	NM_009896.2	Socs1	NP_034026.1	ILMN_2634796	005670497	S	1066	CATGTTTACATATTCCCAGTATCTTTGCACAAACCAGGGGTCGGGGAGGG	16	-	10784005-10784054	16qA1	Mus musculus suppressor of cytokine signaling 1 (Socs1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IMP]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat3 protein [goid 42518] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the JAK-STAT signaling pathway activity [goid 46426] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of insulin receptor signaling [goid 46627] [evidence IDA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19210] [evidence IDA]	SSI-1; Cish1; JAB; Cish7; SOCS-1	SSI-1; Cish1; JAB; Cish7; SOCS-1
Mus musculus	RefSeq	ILMN_218757	ILMN_235943	1700030E15RIK	XM_916123.2	XM_916123.2		75667	94385790	XM_916123.2	1700030E15Rik	XP_921216.1	ILMN_1251190	006450427	S	447	CTTGATCATAGGTTTGCAGTTCTCCTATATGATTTCTCAAAACAAGTGTG				9qA5.1	PREDICTED: Mus musculus RIKEN cDNA 1700030E15 gene (1700030E15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_189631	ILMN_189631	WNT8A	NM_009290.1	NM_009290.1		20890	6678168	NM_009290.1	Wnt8a	NP_033316.1	ILMN_2485198	006620465	S	1230	GGCCTGTAGACCTTCCACGATAGGTGGGTTAGCCTGTAGACCTTCCACGA	18	+	34707411-34707460	18qB1	Mus musculus wingless-related MMTV integration site 8A (Wnt8a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Wnt8d; Wnt-8A; Stra11; Wnt-8D	Wnt8d; Wnt-8A; Stra11; Wnt-8D
Mus musculus	RefSeq	ILMN_189631	ILMN_189631	WNT8A	NM_009290.1	NM_009290.1		20890	6678168	NM_009290.1	Wnt8a	NP_033316.1	ILMN_2485197	001980112	S	13	TGGCCTGTAGACCTTCCACGATAGGTGGGTTAGCCTGTAGACCTTCCACG	18	+	34701979-34702022:34702023-34702028	18qB1	Mus musculus wingless-related MMTV integration site 8A (Wnt8a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Wnt8d; Wnt-8A; Stra11; Wnt-8D	Wnt8d; Wnt-8A; Stra11; Wnt-8D
Mus musculus	RefSeq	ILMN_189631	ILMN_189631	WNT8A	NM_009290.1	NM_009290.1		20890	6678168	NM_009290.1	Wnt8a	NP_033316.1	ILMN_1219317	005340427	S	1460	TTAAGTTTCAGATACCGTTCCACCCAGCTGTGCTGCTGGGAGTGCGAGGG	18	+	34707641-34707690	18qB1	Mus musculus wingless-related MMTV integration site 8A (Wnt8a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Wnt8d; Wnt-8A; Stra11; Wnt-8D	Wnt8d; Wnt-8A; Stra11; Wnt-8D
Mus musculus	Riken	ILMN_206711	ILMN_206711	M6A-PENDING	ri|E530018K16|PX00319G04|AK089158|1689					AK089158	M6a-pending		ILMN_1240179	006860014	S	1449	GGGAAATACAGCAGAGTGAAAACCTGGGTAAAGTCCTGGGTTTCTCAGGC										
Mus musculus	RefSeq	ILMN_188667	ILMN_315979	SDCCAG3	NM_001085408.1	NM_001085408.1		68112	146134373	NM_001085408.1	Sdccag3	NP_001078877.1	ILMN_1212759	002570685	S	1150	GTGAAGTTAAAGATGAGGTGGACTCTTGAGACGCTCTACCTGCCACCGGG				2qA3	Mus musculus serologically defined colon cancer antigen 3 (Sdccag3), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C330016H24Rik; C630038K21Rik; RP23-306D20.6	C330016H24Rik; C630038K21Rik; RP23-306D20.6
Mus musculus	RefSeq	ILMN_210433	ILMN_315979	SDCCAG3	NM_001085408.1	NM_001085408.1		68112	146134373	NM_001085408.1	Sdccag3	NP_001078877.1	ILMN_2605566	001300592	S	441	CCATCTGCCGTGGATCAGACTCATTCCTCTAGAGACACACAGGACTCACC				2qA3	Mus musculus serologically defined colon cancer antigen 3 (Sdccag3), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C330016H24Rik; C630038K21Rik; RP23-306D20.6	C330016H24Rik; C630038K21Rik; RP23-306D20.6
Mus musculus	RefSeq	ILMN_214961	ILMN_214961	PPP4C	NM_019674.3	NM_019674.3		56420	118130591	NM_019674.3	Ppp4c	NP_062648.1	ILMN_1237696	006270735	S	1120	TGGCTTTGCTTGCCCCAGGGTGCGGACTTGCTCTGGAGAGGTGGAGCCTT	7	-	133929544-133929593	7qF3	Mus musculus protein phosphatase 4, catalytic subunit (Ppp4c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence NAS];  [goid 4704] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]	1110002D08Rik; Ppx; AU016079	1110002D08Rik; Ppx; AU016079
Mus musculus	RefSeq	ILMN_222196	ILMN_222196	PRMT8	NM_201371.1	NM_201371.1		381813	41235766	NM_201371.1	Prmt8	NP_958759.1	ILMN_2746167	001340328	S	1794	CTGTTGCTTTTGAATAGGAATTTGTTTCGTGATTAGTTTTCCCCATCCTG	6	-	127639166-127639215	6qF3	Mus musculus protein arginine N-methyltransferase 8 (Prmt8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Hrmt1l3; Hrmt1l4	Hrmt1l3; Hrmt1l4
Mus musculus	RefSeq	ILMN_197108	ILMN_197108	LOC240921	XM_136331.3	XM_136331.3			38074115	XM_136331.3	LOC240921		ILMN_2526935	005820709	S	2353	GACAGCAATGTGATGAATATCCCAACTTCCCTGAGACAAAAAGCCAACGC										
Mus musculus	RefSeq	ILMN_213360	ILMN_213360	NT5E	NM_011851.2	NM_011851.2		23959	31543352	NM_011851.2	Nt5e	NP_035981.1	ILMN_2813830	003610619	S	3166	CAGCAGCTAGATGTCTGGACAGGGAACATGTTGGTTTCCTAGTGTTTACG	9	+	88169599-88169648	9qE3.1	Mus musculus 5' nucleotidase, ecto (Nt5e), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Nt5; eNT; NT; CD73; AI447961; 2210401F01Rik	Nt5; eNT; NT; CD73; AI447961; 2210401F01Rik
Mus musculus	RefSeq	ILMN_201161	ILMN_201161	LOC382042	XM_358695.1	XM_358695.1			38089540	XM_358695.1	LOC382042		ILMN_1234665	003180369	S	369	GCAGGGAAGCCTCTGTTTACAGGGAATGAGACCCTAAAAAGTGGGTCTGG										
Mus musculus	RefSeq	ILMN_195171	ILMN_250456	CYLD	NM_173369.1	NM_173369.1		74256	27734059	NM_173369.1	Cyld	NP_775545.1	ILMN_1260381	005550435	S	4035	ACAGACCCACAGTCCAGAGAAAGTGAAGCTGGCTCAGAGTTAGCACCAAC	8	+	91271913-91271962	8qC3	Mus musculus cylindromatosis (turban tumor syndrome) (Cyld), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	2900009M21Rik; 2010013M14Rik; mKIAA0849; C130039D01Rik; CDMT; EAC; CYLD1	2900009M21Rik; 2010013M14Rik; mKIAA0849; C130039D01Rik; CDMT; EAC; CYLD1
Mus musculus	RefSeq	ILMN_195171	ILMN_250456	CYLD	NM_173369.1	NM_173369.1		74256	27734059	NM_173369.1	Cyld	NP_775545.1	ILMN_1249598	006350463	S	4336	GACCGTGGTGGATGCTGTAGAGTGCTTGTTGTCTGAGTGTTGTTTTGTGG	8	+	91272214-91272263	8qC3	Mus musculus cylindromatosis (turban tumor syndrome) (Cyld), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	2900009M21Rik; 2010013M14Rik; mKIAA0849; C130039D01Rik; CDMT; EAC; CYLD1	2900009M21Rik; 2010013M14Rik; mKIAA0849; C130039D01Rik; CDMT; EAC; CYLD1
Mus musculus	MEEBO	ILMN_194334	ILMN_194334	CPNE3	scl24528.5_32				25141334	NM_027769	Cpne3		ILMN_2505500	004070672	S	10	AATACCTCTTAAGATAATTTTTGATCTATAAATTCTTTTTTGTCATATCT										
Mus musculus	Riken	ILMN_205139	ILMN_205139	9630021O20RIK	ri|9630021O20|PX00115F17|AK079321|4481					AK079321	9630021O20Rik		ILMN_1236355	000990674	S	4348	GAGCAAGTTTGATCTTCAGCAGCAGCAGGAAGAGAAGGGAGAGGAGTGGC										
Mus musculus	Riken	ILMN_204065	ILMN_204065	A630078I01RIK	ri|A630078I01|PX00147L07|AK042285|1404					AK042285	A630078I01Rik		ILMN_2562096	004250195	S	844	CCTCAGGGATGATTTCTTCAATTCGGACCGGGGTTTAGGTGTAGCTCCGC										
Mus musculus	RefSeq	ILMN_212961	ILMN_212961	NUDT4	NM_027722.2	NM_027722.2		71207	31541993	NM_027722.2	Nudt4	NP_081998.2	ILMN_1252730	005340292	S	2458	CCATCACAAGTGCTTGGGGGTTTGTATGTACACGATACTCTCAGAGGTAA	10	-	94977397-94977446	10qC2	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 4 (Nudt4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DIPP2alpha; DIPP2beta; HDCMB47P; 4933436C10Rik; DIPP2	DIPP2alpha; DIPP2beta; HDCMB47P; 4933436C10Rik; DIPP2
Mus musculus	MEEBO	ILMN_193621	ILMN_193621	2210420J11RIK	scl21895.3.1_32						2210420J11Rik		ILMN_2498888	000450021	S	20	GAGTACCTGTTCAACTTCTTGTGGGACTTCTTGTTCAGCAGGCTGTTCTT										
Mus musculus	RefSeq	ILMN_190490	ILMN_233182	0610038D11RIK	NM_026306.2	NM_026306.2		67674	61098119	NM_026306.2	0610038D11Rik	NP_080582.2	ILMN_2470615	006760408	S	237	TCCGATCTCGGCTGCCGCCAAGCCCCCCAAAAGGTCCCCTAAGTCGGCCA	19	+	6984522-6984571	19qA	Mus musculus RIKEN cDNA 0610038D11 gene (0610038D11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211817	ILMN_211817	OLFR19	NM_146335.1	NM_146335.1		18316	22380644	NM_146335.1	Olfr19	NP_666447.1	ILMN_2619785	002760372	S	552	GGTACTACTTGCCTGTAATGACACCTTTCCTAATGACATGGTGATGTACT	16	-	16673471-16673520	16qA3	Mus musculus olfactory receptor 19 (Olfr19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MTPCR15; MOR140-1	MTPCR15; MOR140-1
Mus musculus	RefSeq	ILMN_250423	ILMN_250423	KCNK15	NM_001030292.1	NM_001030292.1		241769	71892415	NM_001030292.1	Kcnk15	NP_001025463.1	ILMN_3045874	002710402	I	196	GAGTTCCGCAGAAAGTACCGCTTCTCCGCCGACGACTACCGCGAGCTGGA	2	+	163679681-163679730	2qH3	Mus musculus potassium channel, subfamily K, member 15 (Kcnk15), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence ISO]	KCNK14; TASK5; KT3.3; KCNK11	KCNK14; TASK5; KT3.3; KCNK11
Mus musculus	RefSeq	ILMN_250423	ILMN_250423	KCNK15	NM_001030292.1	NM_001030292.1		241769	71892415	NM_001030292.1	Kcnk15	NP_001025463.1	ILMN_3121407	006270689	A	512	CGCACGTCTCTGCTGAGAACATGGTGGTGGCCGGGCTGCTGCTCTGCGCA	2	+	163684090-163684139	2qH3	Mus musculus potassium channel, subfamily K, member 15 (Kcnk15), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence ISO]	KCNK14; TASK5; KT3.3; KCNK11	KCNK14; TASK5; KT3.3; KCNK11
Mus musculus	RefSeq	ILMN_219914	ILMN_219914	MTFMT	NM_027134.1	NM_027134.1		69606	21312347	NM_027134.1	Mtfmt	NP_081410.1	ILMN_2715152	003060609	S	687	CCCGAAAGTCTGAACAATGGAAGGCCGCAGCCAGCCGAGGGAGTGACATA	9	+	65239643-65239692	9qC	Mus musculus mitochondrial methionyl-tRNA formyltransferase (Mtfmt), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA];  [goid 16742] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA [goid 4479] [evidence IEA]	2310020P08Rik	2310020P08Rik
Mus musculus	Riken	ILMN_203724	ILMN_203724	PPP1R1C	ri|9630060M03|PX00117P17|AK036360|2385					AK036360	Ppp1r1c		ILMN_1231233	003450053	S	2067	GCCAAGCTGGAATGGAGAGCTATACTGGAGACCACACTGGGAATCCAAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221523	ILMN_260459	PKD1L3	NM_001039700.2	NM_001039700.2		244646	115583680	NM_001039700.2	Pkd1l3	NP_001034789.2	ILMN_2736723	004730170	S	6408	ACAAAAGCTCTCAAGTCTGTTAGGAATCCGCCTGCACCAGAATCCATCTG	8	+	112194543-112194592	8qD3	Mus musculus polycystic kidney disease 1 like 3 (Pkd1l3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_231670	ILMN_231670	HEXIM2	NM_027658.1	NM_027658.1		71059	110625828	NM_027658.1	Hexim2	NP_081934.1	ILMN_2822239	006200682	S	1440	TGGGCACCACTCACTCTGCCCGGCTTGTGTCATGCTGTGGCTCAAACACA	11	+	103000835-103000884	11qE1	Mus musculus hexamthylene bis-acetamide inducible 2 (Hexim2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		RP23-341C5.1; 4933402L21Rik	RP23-341C5.1; 4933402L21Rik
Mus musculus	RefSeq	ILMN_184972	ILMN_231670	HEXIM2	NM_027658.1	NM_027658.1		71059	110625828	NM_027658.1	Hexim2	NP_081934.1	ILMN_1221953	004490059	S	993	CCCTGTCTCCACTGAGAACTGCTAAGACAAGGTCAGAGTTTCCCCTGCCA	11	+	103000388-103000437	11qE1	Mus musculus hexamthylene bis-acetamide inducible 2 (Hexim2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		RP23-341C5.1; 4933402L21Rik	RP23-341C5.1; 4933402L21Rik
Mus musculus	RefSeq	ILMN_184972	ILMN_231670	HEXIM2	NM_027658.1	NM_027658.1		71059	110625828	NM_027658.1	Hexim2	NP_081934.1	ILMN_1249861	000160328	S	840	TCAGGAGAACGAGATGTGGAACCGAGAGGGCGGCTACTGTGACCAGGAGA	11	+	103000235-103000284	11qE1	Mus musculus hexamthylene bis-acetamide inducible 2 (Hexim2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		RP23-341C5.1; 4933402L21Rik	RP23-341C5.1; 4933402L21Rik
Mus musculus	RefSeq	ILMN_218657	ILMN_218657	1110018M03RIK	NM_026271.1	NM_026271.1		67606	13385775	NM_026271.1	1110018M03Rik	NP_080547.1	ILMN_2698637	000730162	S	1567	TTTTGTTTATTGAAAACTTATATTTCCAGAGGGAGGGTCTAACTATAGAA	2	-	110201534-110201583	2qE3	Mus musculus RIKEN cDNA 1110018M03 gene (1110018M03Rik), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Fibin; RP23-110I8.1	Fibin; RP23-110I8.1
Mus musculus	RefSeq	ILMN_234461	ILMN_234461	ECG2	NM_001001803.1	NM_001001803.1		408198	49227051	NM_001001803.1	Ecg2	NP_001001803.1	ILMN_3161810	005490671	S	24	GCTGCTCTTCGCAGCAACCTATGTCTGCAACTGCTCTGTGGACTGTGACA	18	-	62719721-62719733:62721573-62721609	18qE1	Mus musculus esophagus cancer-related gene-2 (Ecg2), mRNA.					
Mus musculus	MEEBO	ILMN_185548	ILMN_185548	SCL0002130.1_20	scl0002130.1_20	AK075923.1			26344813	AK075923.1	scl0002130.1_20		ILMN_1230063	002450619	S	4	TCTACTCGGTAAGGCGTTGGGACCGCTGCGTCCGGTAGTGACGGGCCCTT										
Mus musculus	RefSeq	ILMN_214368	ILMN_214368	GTF3C5	NM_148928.1	NM_148928.1		70239	22507322	NM_148928.1	Gtf3c5	NP_683730.1	ILMN_1222243	005050452	S	447	TCGAACTCTACTTCCGGCCCAAGGACCCATACTGCCACCCTGTGTGTGCT	2	-	28435183-28435232	2qA3	Mus musculus general transcription factor IIIC, polypeptide 5 (Gtf3c5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2700084A09Rik; TFIIIC63; TFiiiC2-63	2700084A09Rik; TFIIIC63; TFiiiC2-63
Mus musculus	RefSeq	ILMN_214368	ILMN_214368	GTF3C5	NM_148928.1	NM_148928.1		70239	22507322	NM_148928.1	Gtf3c5	NP_683730.1	ILMN_2786070	006400603	S	2536	AGGCCTCACTTACACAGAGCCCAGGGCGATGGCCATTCCTGCCATAGGTT	2	-	28421951-28422000	2qA3	Mus musculus general transcription factor IIIC, polypeptide 5 (Gtf3c5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2700084A09Rik; TFIIIC63; TFiiiC2-63	2700084A09Rik; TFIIIC63; TFiiiC2-63
Mus musculus	RefSeq	ILMN_214368	ILMN_214368	GTF3C5	NM_148928.1	NM_148928.1		70239	22507322	NM_148928.1	Gtf3c5	NP_683730.1	ILMN_2647273	002630768	S	2227	ACTTCCCAGTCTTGCATGGAATCAGACAGACCGACCCTGTGTCCCCGCTG	2	-	28422260-28422309	2qA3	Mus musculus general transcription factor IIIC, polypeptide 5 (Gtf3c5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2700084A09Rik; TFIIIC63; TFiiiC2-63	2700084A09Rik; TFIIIC63; TFiiiC2-63
Mus musculus	MEEBO	ILMN_223234	ILMN_223234	CSNK2B	scl49996.9.1_82	NM_009975.1			7106276	NM_009975.1	Csnk2b		ILMN_2761215	004610221	S	1055	TTAGTTTAAATTAAAGGAATTGTTACTGTGGTGGGAATATGAAATAAAGG						Complex that possesses casein kinase activity, found in nearly every subcellular compartment. Protein kinase CK2 complexes are usually tetramers of two alpha and two beta subunits, and can phosphorylate many protein substrates in addition to casein [goid 5956] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Modulation of the activity of the enzyme protein kinase CK2 [goid 8605] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_206587	ILMN_206587	PTDSS1	ri|D930007M09|PX00200P23|AK086136|2809					AK086136	Ptdss1		ILMN_1221198	004040138	S	853	CATGAGCCATAAGTGGGTCAGGTCTTGCTTGGTTTCAGTGTGAACCCTGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 6659] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	Riken	ILMN_206066	ILMN_206066	D830036I24RIK	ri|D830036I24|PX00199H08|AK052909|1138					AK052909	D830036I24Rik		ILMN_1238835	000010601	S	770	GCCAGACAGACGCCTGGGGATTGAATAAAGGCCTGAACCTGCTTGTTGGC										
Mus musculus	RefSeq	ILMN_215478	ILMN_315705	LOC100047712	XM_001478724.1	XM_001478724.1		100047712	149258004	XM_001478724.1	LOC100047712	XP_001478774.1	ILMN_1255358	002900066	S	741	GGAGCCCAAGAAAAAGTGAATCGGGCTGGTAGGCTTGAATCTGCCACTGC					PREDICTED: Mus musculus similar to coiled-coil domain containing 101 (LOC100047712), mRNA.					
Mus musculus	RefSeq	ILMN_212267	ILMN_248531	B930041F14RIK	NM_178699.3	NM_178699.3		230991	124248519	NM_178699.3	B930041F14Rik	NP_848814.2	ILMN_1250201	004900220	S	1939	GTCTTTGCTCTGCCCGTTCCCTGTGAGGCACTGGTCAGTTGCCAACATCT	4	+	155070519-155070568	4qE2	Mus musculus RIKEN cDNA B930041F14 gene (B930041F14Rik), mRNA.				MNCb-3966	MNCb-3966
Mus musculus	RefSeq	ILMN_223958	ILMN_256337	DISP1	NM_026866.2	NM_026866.2		68897	123173790	NM_026866.2	Disp1	NP_081142.2	ILMN_2772288	002350452	S	4885	CATCATGAGATCGAAGTGCGGGACTGAGGACTGCCAGACGCCAAACCTTG	1|NT_165754.2	-	48269-48318		Mus musculus dispatched homolog 1 (Drosophila) (Disp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [evidence IDA]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [evidence IMP]; The posttranslational modification of members of the Hedgehog family of signaling proteins in order for Hedgehog to exert its biological activity. These modifications include cleavage of its signal sequence, autocatalytic protein cleavage and the attachment of sterol moieties [goid 7225] [evidence IDA]; The posttranslational modification of members of the Hedgehog family of signaling proteins in order for Hedgehog to exert its biological activity. These modifications include cleavage of its signal sequence, autocatalytic protein cleavage and the attachment of sterol moieties [goid 7225] [evidence IMP]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]	Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]; Enables the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15197] [evidence IDA]	1190008H24Rik; DispA	1190008H24Rik; DispA
Mus musculus	RefSeq	ILMN_198288	ILMN_198288	LOC381153	XM_355076.1	XM_355076.1			38083645	XM_355076.1	LOC381153		ILMN_1253978	001980047	S	245	AAGAGCAGCGCCCTCAAACTCTCCACCTTCGTGCCCTCCTACAGTGCCTT										
Mus musculus	RefSeq	ILMN_212330	ILMN_212330	RHOT1	NM_021536.6	NM_021536.6		59040	110626022	NM_021536.6	Rhot1	NP_067511.4	ILMN_1242500	003290142	S	2721	GTTTTTAGTTACAATAAAGAAGCCGCCCTGACCACTGCTGAATTCCCACC	11	+	80080052-80080101	11qB5	Mus musculus ras homolog gene family, member T1 (Rhot1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AF244542; C430039G08Rik; Arht1; 2210403N23Rik; AI834919; AA415293; Miro1; FLJ11040	AF244542; C430039G08Rik; Arht1; 2210403N23Rik; AI834919; AA415293; Miro1; FLJ11040
Mus musculus	RefSeq	ILMN_219644	ILMN_219644	FKBP7	NM_010222.1	NM_010222.1		14231	6806908	NM_010222.1	Fkbp7	NP_034352.1	ILMN_1227875	001300274	S	572	GGACTTTGAAAAAGATGCAAACCCCCGTGACAAGTCATATCAGAAGGCAG	2	-	76501339-76501388	2qC3	Mus musculus FK506 binding protein 7 (Fkbp7), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	FKBP23; 23kDa	FKBP23; 23kDa
Mus musculus	RefSeq	ILMN_208626	ILMN_208626	NOSIP	NM_025533.1	NM_025533.1		66394	13384955	NM_025533.1	Nosip	NP_079809.1	ILMN_2890743	004810246	S	819	ATGGTGGACCCCGTGAATGGGGACACGCTGACAGAGCGCGACATCATCGT	7	+	44944912-44944961	7qB4	Mus musculus nitric oxide synthase interacting protein (Nosip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	CGI-25; 2310061K06Rik; MGC115777	CGI-25; 2310061K06Rik; MGC115777
Mus musculus	RefSeq	ILMN_198210	ILMN_198210	LOC381114	XM_355032.1	XM_355032.1			38082909	XM_355032.1	LOC381114		ILMN_2530867	002140551	S	550	CCCGTGAGCACCCCTGGGAGGTTATGCCTGATCTTTACTTCTACAGAGAC										
Mus musculus	RefSeq	ILMN_197628	ILMN_197628	LOC381466	XM_358587.1	XM_358587.1			38076949	XM_358587.1	LOC381466		ILMN_2528793	002260343	S	226	AAGCCCAAAGCTATCAGGTGCGCCAAGATCCCACTGCCTCTCCGCAGCCA										
Mus musculus	RefSeq	ILMN_247151	ILMN_247151	NRAP	NM_008733.3	NM_008733.3		18175	117606367	NM_008733.3	Nrap	NP_032759.3	ILMN_3061287	006270440	I	1313	TGAGACACCCCAGTTCAGGAATGTGAGCAAGATCTCAAAATTCACCAGCG	19	-	56448855-56448904	19qD2	Mus musculus nebulin-related anchoring protein (Nrap), transcript variant 2, mRNA.	The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]; Terminal anchorage site of skeletal muscle cells to tendons; a specialised type of contact between the cell and the extracellular matrix in skeletal muscle [goid 5927] [evidence IDA]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]	Interacting selectively with muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc [goid 51371] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane [goid 17166] [evidence IPI]		
Mus musculus	RefSeq	ILMN_247151	ILMN_247151	NRAP	NM_008733.3	NM_008733.3		18175	117606367	NM_008733.3	Nrap	NP_032759.3	ILMN_3138732	003170047	A	5138	AGGTGTTGGCTGGACCCCTCCTGGCTCCTACAAAGTGGAAATGGCTCGAC	19	-	56395424-56395473	19qD2	Mus musculus nebulin-related anchoring protein (Nrap), transcript variant 2, mRNA.	The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]; Terminal anchorage site of skeletal muscle cells to tendons; a specialised type of contact between the cell and the extracellular matrix in skeletal muscle [goid 5927] [evidence IDA]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]	Interacting selectively with muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc [goid 51371] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane [goid 17166] [evidence IPI]		
Mus musculus	RefSeq	ILMN_184465	ILMN_227540	ENTPD6	NM_172117.4	NM_172117.4		12497	146149096	NM_172117.4	Entpd6	NP_742115.2	ILMN_2603412	005560059	S	515	TTCCTTATGATTTCTGGAAGGCTACCCCTCTGGTTCTCAAGGCCACAGCT				2qG3	Mus musculus ectonucleoside triphosphate diphosphohydrolase 6 (Entpd6), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Cd39l2; NTPDase-6; 2700026H11Rik	Cd39l2; NTPDase-6; 2700026H11Rik
Mus musculus	RefSeq	ILMN_184465	ILMN_227540	ENTPD6	NM_172117.4	NM_172117.4		12497	146149096	NM_172117.4	Entpd6	NP_742115.2	ILMN_1239319	001030010	S	1771	CCATCCCTGTGCAGGATTGTGGCTGCTTTTATGTGTTTCTGTGACGTGAG				2qG3	Mus musculus ectonucleoside triphosphate diphosphohydrolase 6 (Entpd6), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Cd39l2; NTPDase-6; 2700026H11Rik	Cd39l2; NTPDase-6; 2700026H11Rik
Mus musculus	RefSeq	ILMN_200129	ILMN_200129	LOC385615	XM_358790.1	XM_358790.1			38080559	XM_358790.1	LOC385615		ILMN_1218717	001050255	S	1139	CTTTGGCAGTTGGCTCAATTGGGCTGTGAATACAAGATGCCTGGCCTTTG										
Mus musculus	RefSeq	ILMN_209956	ILMN_209956	1200009I06RIK	NM_028807.2	NM_028807.2		74190	50054027	NM_028807.2	1200009I06Rik	NP_083083.2	ILMN_1248750	006770673	S	1576	AAGGCAGCTGGCGCTATCTCCGCGGAGCTGGAGGCCACTACCCTGCAGAT	12	+	112664128-112664177	12qF1	Mus musculus RIKEN cDNA 1200009I06 gene (1200009I06Rik), mRNA.				1600013K19Rik	1600013K19Rik
Mus musculus	Riken	ILMN_203857	ILMN_203857	A630008H02RIK	ri|A630008H02|PX00144F05|AK041423|3844					AK041423	A630008H02Rik		ILMN_1258908	001240041	S	3667	TGTGCCTTGGGAAGCCCATGCGCAGCAGATCCAGTGTTATGTACGGTGTA										
Mus musculus	RefSeq	ILMN_194334	ILMN_226895	CPNE3	NM_027769.2	NM_027769.2		70568	62530190	NM_027769.2	Cpne3	NP_082045.1	ILMN_1235963	005050193	S	2722	TTTCTTGTCCTGTGTATTGATTTATATGAATTTATTTAGATATTTTTGCC	4	-	19449273-19449322	4qA3	Mus musculus copine III (Cpne3), mRNA.				KIAA0636; 5730450C07Rik; 5430428M23Rik; C85108; CPN3	KIAA0636; 5730450C07Rik; 5430428M23Rik; C85108; CPN3
Mus musculus	MEEBO	ILMN_192366	ILMN_192366	A630054D14	scl26919.4.1_249						A630054D14		ILMN_2487437	003190541	S	4	GAAAGGGGGTGTGAGGATAGCAGGGAGTGAAATGATTAAAATTGGTTATA										
Mus musculus	MEEBO	ILMN_194592	ILMN_194592	NUDT10	scl00102954.1_144						Nudt10		ILMN_2507793	006270431	S	20	ATATACCGAAGAAACTGGATCATCTGTCCCGGGTTTTCCTGGAGTCGGAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: diphospho-myo-inositol polyphosphate + H2O = myo-inositol polyphosphate + phosphate [goid 8486] [evidence IDA]		
Mus musculus	RefSeq	ILMN_198544	ILMN_237857	LOC214450	XR_002854.1	XR_002854.1		214450	94408672	XR_002854.1	LOC214450		ILMN_1239925	007150241	S	1105	GTCCACAACATGCTTCCTATGTTCATGCTGCAGCAAGTGTCTTTTGGGGC				XqA2	PREDICTED: Mus musculus similar to testis derived transcript isoform 1 (LOC214450), mRNA.					
Mus musculus	MEEBO	ILMN_184132	ILMN_184132	POLR3A	scl077514.1_125				51768267	XM_487324	Polr3a		ILMN_1255378	005890026	S	4	GTCAGACTTATTCCTGCATCATTCAAGGTATATTATTCACCCTAGGAAAG							The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184132	ILMN_184132	POLR3A	scl077514.1_125				51768267	XM_487324	Polr3a		ILMN_1250024	007400424	S	13	GGGGATTAAGGATCAACTCTGTTGTACATGGTCCATTAGATTTAAGTGGC							The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]		
Mus musculus	MEEBO	ILMN_209105	ILMN_209105	C130073D16RIK	scl00269800.1_50	NM_175557.2			31342173	NM_175557.2	C130073D16Rik		ILMN_2659716	002510133	S	919	GGGAACTGCGGCACAGGAAATGGACAGAGCCTTGGGCTCATGGATTCAGT										
Mus musculus	Riken	ILMN_203063	ILMN_203063	C030003M13RIK	ri|C030003M13|PX00073F18|AK047634|1330					AK047634	C030003M13Rik		ILMN_2554456	000270021	S	914	GGCAGATTCTTCATGGAGTTGTGTTCTTGTTGGAGAGATTGTCCCCGTGA										
Mus musculus	RefSeq	ILMN_198971	ILMN_247969	FAT3	NM_001080814.1	NM_001080814.1		270120	124249104	NM_001080814.1	Fat3	NP_001074283.1	ILMN_1256797	004540465	S	3351	CACAGACCGGGGCGTGGTCCCTCTCTATTCCACCATTGAGGTTTACATAG	9	-	16051362-16051411	9qA2	Mus musculus FAT tumor suppressor homolog 3 (Drosophila) (Fat3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm1132; 9430076A06Rik; Gm510; D430038H04Rik; MFAT3F	Gm1132; 9430076A06Rik; Gm510; D430038H04Rik; MFAT3F
Mus musculus	RefSeq	ILMN_201265	ILMN_247969	FAT3	NM_001080814.1	NM_001080814.1		270120	124249104	NM_001080814.1	Fat3	NP_001074283.1	ILMN_1219243	003520497	S	11106	GGAGATGCACAGCAGCGAGTTCTACAAGCCAGCCTATCTGATCCAGAAGC	9	-	15764388-15764437	9qA2	Mus musculus FAT tumor suppressor homolog 3 (Drosophila) (Fat3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm1132; 9430076A06Rik; Gm510; D430038H04Rik; MFAT3F	Gm1132; 9430076A06Rik; Gm510; D430038H04Rik; MFAT3F
Mus musculus	RefSeq	ILMN_221813	ILMN_221813	EG330305	NM_183309.2	NM_183309.2		330305	142343695	NM_183309.2	EG330305	NP_899132.1	ILMN_2740720	001010647	S	684	GGACCTGGCAGTCAGTGTGTCTTTTAGAAGGAGTCAGACATCCTTGCTCA	6	+	48540303-48540352	6qB2.3	Mus musculus predicted gene, EG330305 (EG330305), mRNA.				A630038D02; MGC129448	A630038D02; MGC129448
Mus musculus	RefSeq	ILMN_211701	ILMN_211701	SERPINB2	NM_011111.3	NM_011111.3		18788	51468082	NM_011111.3	Serpinb2	NP_035241.1	ILMN_1253874	004050762	S	1049	TTCTTTCTGAGGTGTTCCATCAAGCCAGCGTGGATGTCACCGAGGAGGGC	1	+	109421319-109421368	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 2 (Serpinb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	ovalbumin; Planh2; PAI-2	ovalbumin; Planh2; PAI-2
Mus musculus	RefSeq	ILMN_212115	ILMN_212115	ITGB2L	NM_008405.3	NM_008405.3		16415	141802263	NM_008405.3	Itgb2l	NP_032431.2	ILMN_1258735	006420445	S	2406	GGTGTTATAGTATTTCTTTCCACAATGGCCAACCTGCCAGGTCTTCTGTG	16	-	96644067-96644116	16qC4	Mus musculus integrin beta 2-like (Itgb2l), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	pactolus; MGC130514; 5033406G21Rik	pactolus; MGC130514; 5033406G21Rik
Mus musculus	RefSeq	ILMN_212115	ILMN_212115	ITGB2L	NM_008405.3	NM_008405.3		16415	141802263	NM_008405.3	Itgb2l	NP_032431.2	ILMN_1220485	000430463	S	1241	CAGCTTCAGAGTGCTTCCGGGAGCAGTTCTTTTTCATCCAGGCACTGGGC	16	-	96649396-96649445	16qC4	Mus musculus integrin beta 2-like (Itgb2l), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	pactolus; MGC130514; 5033406G21Rik	pactolus; MGC130514; 5033406G21Rik
Mus musculus	Riken	ILMN_204054	ILMN_204054	A130060I20RIK	ri|A130060I20|PX00123P21|AK037896|2646					AK037896	A130060I20Rik		ILMN_1221263	000940750	S	2274	GGGACATTCTGGTACTGTGTTCTTTGGCTTGGGAAGTATTGCAGCCCCCC										
Mus musculus	RefSeq	ILMN_223285	ILMN_223285	OLFR1164	NM_146641.1	NM_146641.1		258634	22380650	NM_146641.1	Olfr1164	NP_666852.1	ILMN_1225305	004180768	S	676	ATCATCACTTCCTATGTTTTTATAGTTGTCACTGTCATCAAAATTCCCAC	2	-	87933366-87933415	2qD	Mus musculus olfactory receptor 1164 (Olfr1164), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR174-11	MOR174-11
Mus musculus	MEEBO	ILMN_221490	ILMN_221490	GATS	scl27148.11_0	XM_289726.2			38081669	XM_289726.2	Gats		ILMN_1219184	002680168	S	550	CTGGCATGTCGTGCCCAGGTCACCAGCAACAGTGGTACTTCATCAGTCCT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_245264	ILMN_245264	OLFR1382	NM_001011790.1	NM_001011790.1		257971	58801345	NM_001011790.1	Olfr1382	NP_001011790.1	ILMN_2879185	007150632	S	768	CACGTACCTCCAACCTGTCCACAGGTATTCTGATAGTGAGGGGAAGTTTG	11	+	49349456-49349505	11qB1.2	Mus musculus olfactory receptor 1382 (Olfr1382), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-57; MOR256-43P	MOR256-57; MOR256-43P
Mus musculus	RefSeq	ILMN_186628	ILMN_224513	ZFP667	NM_001024928.2	NM_001024928.2		384763	88853589	NM_001024928.2	Zfp667	NP_001020099.1	ILMN_2437156	004860156	S	1263	GGGGAGAAGCAGTTTAAGTGCAGCAAGTGTGAGAAGGTGTGTAGTCGCCT	7	+	6257077-6257126	7qA1	Mus musculus zinc finger protein 667 (Zfp667), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Mip1; A830025F02Rik; ZNF667	Mip1; A830025F02Rik; ZNF667
Mus musculus	RefSeq	ILMN_224513	ILMN_224513	ZFP667	NM_001024928.2	NM_001024928.2		384763	88853589	NM_001024928.2	Zfp667	NP_001020099.1	ILMN_2984153	005260661	S	3154	CAGGCGGGCCATCTGCAAACCAAGAAAAGATCCTACCAGAACCTGACCAG	7	+	6258968-6259017	7qA1	Mus musculus zinc finger protein 667 (Zfp667), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Mip1; A830025F02Rik; ZNF667	Mip1; A830025F02Rik; ZNF667
Mus musculus	RefSeq	ILMN_185774	ILMN_224513	ZFP667	NM_001024928.2	NM_001024928.2		384763	88853589	NM_001024928.2	Zfp667	NP_001020099.1	ILMN_2429879	005390170	S	881	GTGAACGCTGTCAGTAGTGTGATTATTACGGTGTAGACTGAGGGAGGGGC	7	+	6256695-6256744	7qA1	Mus musculus zinc finger protein 667 (Zfp667), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Mip1; A830025F02Rik; ZNF667	Mip1; A830025F02Rik; ZNF667
Mus musculus	MEEBO	ILMN_190420	ILMN_190420	6430590A10RIK	scl37554.1_507				31342606	NM_177017	6430590A10Rik		ILMN_1220924	002070477	S	18	CCTAGATTTCAGGTAAGAACATTGCCACTAATCCTTTTCAAAGAACCGAG										
Mus musculus	Riken	ILMN_206002	ILMN_206002	A830027N12RIK	ri|A830027N12|PX00154N20|AK043747|1886					AK043747	A830027N12Rik		ILMN_1227695	004120059	S	1814	GGAGAGCCCACAGGTAGTCCTAAGGGAACCAGAGAAGCAGCAAAGGGTGC										
Mus musculus	RefSeq	ILMN_195684	ILMN_217670	KCNIP4	NM_030265.3	NM_030265.3		80334	125660455	NM_030265.3	Kcnip4	NP_084541.3	ILMN_1214447	003610746	S	104	GGGGCTTGAAATGATAGCAGTTCTGATCGTCATTGTGCTTTTTGTTAAAT	5	-	49280643-49280692	5qB3	Mus musculus Kv channel interacting protein 4 (Kcnip4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Calp250; KChIP4; AV032399; Calp	Calp250; KChIP4; AV032399; Calp
Mus musculus	MEEBO	ILMN_191203	ILMN_191203	1700067C04RIK	scl3970.1.1_157						1700067C04Rik		ILMN_2477065	004280465	S	6	GTTTCAGACTCCTCGCTGTCTGCAATGGACCTCTTCAGGGCCCCACATGG										
Mus musculus	RefSeq	ILMN_219525	ILMN_219525	HAMP	NM_032541.1	NM_032541.1		84506	14211541	NM_032541.1	Hamp	NP_115930.1	ILMN_1236304	006280692	S	246	GCTGTAACAATTCCCAGTGTGGTATCTGTTGCAAAACATAGCCTAGAGCC	7	-	31727486-31727495:31727496-31727535	7qB1	Mus musculus hepcidin antimicrobial peptide (Hamp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]; Reactions triggered in response to the presence of a fungus that act to protect the cell or organism [goid 50832] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Hepc; Hepc1; Hamp	Hepc; Hepc1; Hamp
Mus musculus	MEEBO	ILMN_214206	ILMN_214206	1810026B05RIK	scl069170.1_207				51749643	XM_489186	1810026B05Rik		ILMN_2645517	005550088	S	1329	ACATCTGGAGAAGACTCTACAATTCTACAAATGGTAGTTTGTATTCCTGG										
Mus musculus	MEEBO	ILMN_214206	ILMN_214206	1810026B05RIK	scl069170.1_207				51749643	XM_489186	1810026B05Rik		ILMN_1253900	003400136	S	1074	GGCCTGCACCATAGACATCGAAGCATTTACACCCCGCTTGAAGAGTTTGA										
Mus musculus	Riken	ILMN_205372	ILMN_205372	PREI2	ri|D030077O05|PX00182M17|AK051122|1793					AK051122	Prei2		ILMN_1249189	002350100	S	926	CACAGGCCCCAAAAGGCCTGGACCAGTCATATAGTTGCTATTGGTTCTGG										
Mus musculus	RefSeq	ILMN_189592	ILMN_250238	ZCCHC10	NM_026479.4	NM_026479.4		67966	146135040	NM_026479.4	Zcchc10	NP_080755.2	ILMN_2764235	000160605	S	1047	GTATGGGACAGTCTTTGACTGTACTGTATCAGAATATCAAGAAGTTTCTT				11qB1.3	Mus musculus zinc finger, CCHC domain containing 10 (Zcchc10), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AA675321; 2410141K03Rik; D11Ertd416e	AA675321; 2410141K03Rik; D11Ertd416e
Mus musculus	RefSeq	ILMN_262138	ILMN_261087	KLC1	NM_001025360.2	NM_001025360.2		16593	131412177	NM_001025360.2	Klc1	NP_001020531.2	ILMN_3163020	007330358	A	1616	ACCGACGGCAGGGGAAGTTTGAAGCTGCAGAGACATTGGAAGAAGCCGCC	12	+	113025740-113025789	12qF1	Mus musculus kinesin light chain 1 (Klc1), transcript variant d, mRNA. XM_992298	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43227] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IPI]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Kns2; AI874768	Kns2; AI874768
Mus musculus	RefSeq	ILMN_256790	ILMN_256790	KSR2	NM_001034873.2	NM_001034873.2		333050	118131065	NM_001034873.2	Ksr2	NP_001030045.1	ILMN_3101450	006450184	A	1745	TTCACAGCGCTGCACAGGAGCAAATCCCACGAGTTCCAGCTCGGGAACCG	5	+	118005413-118005462	5qF	Mus musculus kinase suppressor of ras 2 (Ksr2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200432	ILMN_256790	KSR2	NM_001034873.2	NM_001034873.2		333050	118131065	NM_001034873.2	Ksr2	NP_001030045.1	ILMN_1221857	005670753	S	955	GACCAAGTGTGCAGCTTCCAACGACCTCACGCAGAAGGAGATCAGGACCC	5	+	117864963-117865012	5qF	Mus musculus kinase suppressor of ras 2 (Ksr2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_256790	ILMN_256790	KSR2	NM_001034873.2	NM_001034873.2		333050	118131065	NM_001034873.2	Ksr2	NP_001030045.1	ILMN_3028295	001770307	I	2146	ACGGAGTACATGCTTATCCTGTGGATGGAGGCAGGACAGGGTTGCTGGGC	5	+	118005814-118005863	5qF	Mus musculus kinase suppressor of ras 2 (Ksr2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218147	ILMN_232017	ITGA10	NM_001081053.1	NM_001081053.1		213119	124486691	NM_001081053.1	Itga10	NP_001074522.1	ILMN_2692244	006590402	S	4973	GCAGAGAGTCCCTCCTGGGGACTGTCATGGTGAGCAAATGGTCAGAACAA	3	+	96460167-96460216	3qF2.1	Mus musculus integrin, alpha 10 (Itga10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A630048L14	A630048L14
Mus musculus	RefSeq	ILMN_214807	ILMN_228750	PHF21B	NM_001081166.1	NM_001081166.1		271305	124487186	NM_001081166.1	Phf21b	NP_001074635.1	ILMN_1229266	005900551	S	3508	CGCACGGCTGGCGACGTAACTGTCTTCAGGTTCTTTTGTTGGTTTGATTT	15	-	84616048-84616097	15qE2	Mus musculus PHD finger protein 21B (Phf21b), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A730032D07Rik	A730032D07Rik
Mus musculus	RefSeq	ILMN_197119	ILMN_309890	LOC667411	XR_030665.1	XR_030665.1		667411	149263804	XR_030665.1	LOC667411		ILMN_1228742	003890021	S	733	TCAGTACAAGCCTTCAGAAGACAGAGTGAGGGAAATCATTGCTGATGCTG	13	+	3352907-3352956	13qA1	PREDICTED: Mus musculus similar to ribonucleotide reductase M2 B (TP53 inducible) (LOC667411), misc RNA.					
Mus musculus	Riken	ILMN_207101	ILMN_207101	E330034L11RIK	ri|E330034L11|PX00318D04|AK087876|1748					AK087876	E330034L11Rik		ILMN_1254312	000840750	S	1628	GGCACTCAGGGAGTTCTGGGCCACCAAAGACCTGCATCAAAACTAAAGGG										
Mus musculus	RefSeq	ILMN_217976	ILMN_217976	CBX4	NM_007625.1	NM_007625.1		12418	6680861	NM_007625.1	Cbx4	NP_031651.1	ILMN_2690038	002650446	S	2236	AGATCATGTTATATTCTATATCAGACAGACTATTTTAAGTTGGCCTTTTC	11	-	118941700-118941749	11qE2	Mus musculus chromobox homolog 4 (Drosophila Pc class) (Cbx4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with a phosphorylated protein [goid 51219] [evidence IPI]	MPc2; MGC143698; MGC143697; PC2	MPc2; MGC143698; MGC143697; PC2
Mus musculus	Riken	ILMN_204486	ILMN_204486	B130019E04RIK	ri|B130019E04|PX00157P06|AK045010|3054					AK045010	B130019E04Rik		ILMN_1234189	006250301	S	2642	CCTGCACAGGAAGTAACTGATCACCACATGCTCTGTCTGCTGCTGGCATT										
Mus musculus	RefSeq	ILMN_197327	ILMN_197327	LOC380869	XM_354774.1	XM_354774.1			38075158	XM_354774.1	LOC380869		ILMN_2527743	005810577	S	413	AGTTTCCAATCTCAGTCCATGTCTACCCCTATTGTGGCTGTGCAGAGCTC										
Mus musculus	MEEBO	ILMN_217676	ILMN_217676	OLFR1511	scl0258268.1_263				22129740	NM_146271	Olfr1511		ILMN_2686237	005960064	S	822	GGAGCAGTTGCTGTATTTTACACTGTTGTCACTCCATTACTGAATCCCCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213436	ILMN_213436	2810021J22RIK	NM_172403.2	NM_172403.2		69944	40254208	NM_172403.2	2810021J22Rik	NP_765991.1	ILMN_1249385	003130082	S	4767	GCGTATGATTTTACCACATTAGCAGGGGTTCCCTGTGTGCAGGGGCATGC	11	+	58697715-58697764	11qB1.3	Mus musculus RIKEN cDNA 2810021J22 gene (2810021J22Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI449137; RP23-419P16.9	AI449137; RP23-419P16.9
Mus musculus	RefSeq	ILMN_213436	ILMN_213436	2810021J22RIK	NM_172403.2	NM_172403.2		69944	40254208	NM_172403.2	2810021J22Rik	NP_765991.1	ILMN_2637042	003800553	S	4771	ATGATTTTACCACATTAGCAGGGGTTCCCTGTGTGCAGGGGCATGCAGGA	11	+	58697719-58697768	11qB1.3	Mus musculus RIKEN cDNA 2810021J22 gene (2810021J22Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI449137; RP23-419P16.9	AI449137; RP23-419P16.9
Mus musculus	RefSeq	ILMN_213436	ILMN_213436	2810021J22RIK	NM_172403.2	NM_172403.2		69944	40254208	NM_172403.2	2810021J22Rik	NP_765991.1	ILMN_2674668	005390326	S	3316	TGGGTCTTATGGGAGTTTTAACATTTGTCATGAGTCATTTCTTCCCGGCC	11	+	58696264-58696313	11qB1.3	Mus musculus RIKEN cDNA 2810021J22 gene (2810021J22Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI449137; RP23-419P16.9	AI449137; RP23-419P16.9
Mus musculus	RefSeq	ILMN_211341	ILMN_211341	FARSB	NM_011811.3	NM_011811.3		23874	142362293	NM_011811.3	Farsb	NP_035941.2	ILMN_2614825	006290719	S	1518	CTCCCGGGTTTGAGATCATCCATGGCTTGCTGGACAGAATTATGCAGCTG	1	-	78462464-78462513	1qC4	Mus musculus phenylalanyl-tRNA synthetase, beta subunit (Farsb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling phenylalanine to phenylalanyl-tRNA, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6432] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe) [goid 4826] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Farslb; Farsl; Frsb; Farsa; C76708	Farslb; Farsl; Frsb; Farsa; C76708
Mus musculus	RefSeq	ILMN_217527	ILMN_249832	DOCK11	NM_001009947.3	NM_001009947.3		75974	125660463	NM_001009947.3	Dock11	NP_001009947.2	ILMN_2684324	002320273	S	5910	CGTGGACATGATTCAGCTTCAGCTAAAGTTGCAGGGCTGTGTCTCTGTGC	X	+	33607794-33607843	XqA3.2	Mus musculus dedicator of cytokinesis 11 (Dock11), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]	sph238; 8030476J24; 5033414A21Rik; Zizimin2	sph238; 8030476J24; 5033414A21Rik; Zizimin2
Mus musculus	RefSeq	ILMN_249832	ILMN_249832	DOCK11	NM_001009947.3	NM_001009947.3		75974	125660463	NM_001009947.3	Dock11	NP_001009947.2	ILMN_2861406	005310445	S	6299	CCCCAAGATACGCGGAAGTATGAAGAGATTTGGAAGGAAATGGCAATGAG	X	+	33616191-33616213:33616214-33616240	XqA3.2	Mus musculus dedicator of cytokinesis 11 (Dock11), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]	sph238; 8030476J24; 5033414A21Rik; Zizimin2	sph238; 8030476J24; 5033414A21Rik; Zizimin2
Mus musculus	RefSeq	ILMN_188426	ILMN_188426	TRIM9	NM_053167.1	NM_053167.1		94090	39930486	NM_053167.1	Trim9	NP_444397.1	ILMN_2800380	007560315	S	2688	CCACCCACGGGAGACAGACGCCTTCTCTACCCTGTCTATTTATCCTTTGC	12	-	71166649-71166698	12qC2	Mus musculus tripartite motif protein 9 (Trim9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]	Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	C030048G07Rik; AI835002; mKIAA0282	C030048G07Rik; AI835002; mKIAA0282
Mus musculus	RefSeq	ILMN_258142	ILMN_258142	LRRC7	NM_001081358.1	NM_001081358.1		242274	124486884	NM_001081358.1	Lrrc7	NP_001074827.1	ILMN_3151444	007040129	A	5605	CGAAAGGGCAGAGGAGTATGGACGGTTATCCCGAGCAGTTCTGTGTGAGG	3	-	157790259-157790271:157798152-157798188	3qH4	Mus musculus leucine rich repeat containing 7 (Lrrc7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1365; AK122498	mKIAA1365; AK122498
Mus musculus	RefSeq	ILMN_198832	ILMN_198832	LOC213014	XM_145322.3	XM_145322.3			38088637	XM_145322.3	LOC213014		ILMN_1217432	004220148	S	1232	AGCCAGCTCTTGGCACTAGGAATCATCAGGGGGTTTGTTGGCAAGCAGCC										
Mus musculus	RefSeq	ILMN_192717	ILMN_192717	ZRSR2	NM_009453.2	NM_009453.2		22184	121949799	NM_009453.2	Zrsr2	NP_033479.2	ILMN_1258196	003400392	S	2694	TATCTGCCAATAGACTTGACAACATTCCTATTGTTGGATTTTAAAGGTGG	X	-	160373375-160373424	XqF5	Mus musculus zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 (Zrsr2), transcript variant 1, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	C77286; U2af1-rs2; A230052C13Rik; 35kDa; 5031411E02Rik	C77286; U2af1-rs2; A230052C13Rik; 35kDa; 5031411E02Rik
Mus musculus	RefSeq	ILMN_192717	ILMN_192717	ZRSR2	NM_009453.2	NM_009453.2		22184	121949799	NM_009453.2	Zrsr2	NP_033479.2	ILMN_2522801	006620470	S	1934	GCAGCTACTCACCTGTATAGATAGATGATGCTAGCTAATGCTATCATGTA	X	-	160374135-160374184	XqF5	Mus musculus zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 (Zrsr2), transcript variant 1, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	C77286; U2af1-rs2; A230052C13Rik; 35kDa; 5031411E02Rik	C77286; U2af1-rs2; A230052C13Rik; 35kDa; 5031411E02Rik
Mus musculus	RefSeq	ILMN_213437	ILMN_211717	GADD45GIP1	NM_183358.3	NM_183358.3		102060	142387542	NM_183358.3	Gadd45gip1	NP_899202.2	ILMN_2745692	005560440	S	1117	ACAGGTGAAGTGGGCATGCTGAGAAACGGGGAGGAGCCTAGGAGCCTTAC	8	+	87358764-87358813	8qC3	Mus musculus growth arrest and DNA-damage-inducible, gamma interacting protein 1 (Gadd45gip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		Plinp1; Crif1; 2310040G17Rik; AI425883	Plinp1; Crif1; 2310040G17Rik; AI425883
Mus musculus	RefSeq	ILMN_211717	ILMN_211717	GADD45GIP1	NM_183358.3	NM_183358.3		102060	142387542	NM_183358.3	Gadd45gip1	NP_899202.2	ILMN_1240677	003370717	S	1515	AGGGGCCCATCTGTCGCCTCATGGTCTTGCCAACAACTTTTGAGTAGGCT	8	+	87359162-87359211	8qC3	Mus musculus growth arrest and DNA-damage-inducible, gamma interacting protein 1 (Gadd45gip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		Plinp1; Crif1; 2310040G17Rik; AI425883	Plinp1; Crif1; 2310040G17Rik; AI425883
Mus musculus	RefSeq	ILMN_201309	ILMN_241831	1700017N19RIK	NM_001081246.1	NM_001081246.1		66605	124486960	NM_001081246.1	1700017N19Rik	NP_001074715.1	ILMN_1225659	004200097	S	1167	CCAAGAGATGCAGTAAGAACTGTCACACTGAACGCCCCTCCCCGAAGCCG	10	+	100075473-100075522	10qD1	Mus musculus RIKEN cDNA 1700017N19 gene (1700017N19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218210	ILMN_317035	LOC100045252	XR_031462.1	XR_031462.1		100045252	149258700	XR_031462.1	LOC100045252		ILMN_2692980	000050576	S	2440	GGCAGAATACCTGAGAGGAACACAAGCGAATAAGTAACTTGGTTTTGCAG					PREDICTED: Mus musculus similar to CDNA sequence BC035537 (LOC100045252), misc RNA.					
Mus musculus	RefSeq	ILMN_220617	ILMN_220617	CCR8	NM_007720.2	NM_007720.2		12776	58331154	NM_007720.2	Ccr8	NP_031746.1	ILMN_2724465	000990711	S	930	CTTTTACCCACTGCTGCGTGAACCCCGTCATCTACGCGTTCATAGGAGAG	9	+	120003663-120003712	9qF4	Mus musculus chemokine (C-C motif) receptor 8 (Ccr8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IDA]	mCCR8; MGC123959; Cmkbr8; MGC123958	mCCR8; MGC123959; Cmkbr8; MGC123958
Mus musculus	RefSeq	ILMN_223146	ILMN_249171	EG668829	XM_001005405.1	XM_001005405.1		668829	94386656	XM_001005405.1	EG668829	XP_001005405.1	ILMN_2759902	000510674	S	301	CCAACGAGCCATCACTGGTGCATCTCTTGCTGATATAATGGCCAAGAGGA	9	-	115949898-115949947	9qF3	PREDICTED: Mus musculus predicted gene, EG668829 (EG668829), mRNA.					
Mus musculus	MEEBO	ILMN_224300	ILMN_224300	SYN3	scl37660.17.1_37				7305534	NM_013722	Syn3		ILMN_2778216	005690767	S	1905	GAGGAAGTCCTTCGCCAGTCTCTTCTCTGACTAGCCCCTATCCAGGCTGG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209724	ILMN_209724	CSN1S2A	NM_007785.1	NM_007785.1		12993	6681056	NM_007785.1	Csn1s2a	NP_031811.1	ILMN_1235362	006450202	S	697	TAACATTCCCTAAGATGCTTCTTGAAAAGACAACAATATTGAGCCAGAAG	5	+	88210863-88210890:88210788-88210809	5qE1	Mus musculus casein alpha s2-like A (Csn1s2a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Csng; Csn1s2b	Csng; Csn1s2b
Mus musculus	RefSeq	ILMN_237878	ILMN_237878	RASGRF1	NM_001039655.1	NM_001039655.1		19417	89111130	NM_001039655.1	Rasgrf1	NP_001034744.1	ILMN_3055230	000770451	I	656	CCAGCTCCACAGACATGGATGGGAAAGCCAGAAGACTTGACAACGCTGCG	9	+	89810341-89810390	9qE3.1	Mus musculus RAS protein-specific guanine nucleotide-releasing factor 1 (Rasgrf1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rac protein signal transduction [goid 35020] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Any process that activates or increases the activity of a GTPase of the Ras superfamily [goid 32320] [evidence IDA]; Any process that initiates the activity of an inactive GTPase of the Rac family through the replacement of GDP by GTP [goid 32863] [evidence IDA]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Interacting selectively with a glutamate receptor [goid 35254] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CDC25Mm; p190; p190RhoGEF; Ras-GRF1; Grfbeta; Grf1; P190-A; CDC25	CDC25Mm; p190; p190RhoGEF; Ras-GRF1; Grfbeta; Grf1; P190-A; CDC25
Mus musculus	RefSeq	ILMN_237878	ILMN_237878	RASGRF1	NM_001039655.1	NM_001039655.1		19417	89111130	NM_001039655.1	Rasgrf1	NP_001034744.1	ILMN_3132050	003130523	A	357	CCCTGCTCCAGAACCTGCTTTTCTACTTCGAAAGCGACTCCAGCCCTCGG	9	+	89804969-89805018	9qE3.1	Mus musculus RAS protein-specific guanine nucleotide-releasing factor 1 (Rasgrf1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rac protein signal transduction [goid 35020] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Any process that activates or increases the activity of a GTPase of the Ras superfamily [goid 32320] [evidence IDA]; Any process that initiates the activity of an inactive GTPase of the Rac family through the replacement of GDP by GTP [goid 32863] [evidence IDA]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Interacting selectively with a glutamate receptor [goid 35254] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CDC25Mm; p190; p190RhoGEF; Ras-GRF1; Grfbeta; Grf1; P190-A; CDC25	CDC25Mm; p190; p190RhoGEF; Ras-GRF1; Grfbeta; Grf1; P190-A; CDC25
Mus musculus	RefSeq	ILMN_209056	ILMN_209056	B4GALT6	NM_019737.1	NM_019737.1		56386	9790036	NM_019737.1	B4galt6	NP_062711.1	ILMN_1250019	007550017	S	4068	CACACACTTCATAATGTGGCGGGCTGTCCACAGTGGGGTGCCTTTTGCAT	18	-	20844790-20844839	18qA2	Mus musculus UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6 (B4galt6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence TAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence ISO]	AA536803; AU022389	AA536803; AU022389
Mus musculus	RefSeq	ILMN_186429	ILMN_186429	TNFSF8	NM_009403.2	NM_009403.2		21949	31981959	NM_009403.2	Tnfsf8	NP_033429.1	ILMN_2435486	001440152	S	13	TCTGTCAAGCTGTGCTCAGAAAGTCAACCACTGAAGATGGAGGGTGAGGC	4	-	63347583-63347632	4qC1	Mus musculus tumor necrosis factor (ligand) superfamily, member 8 (Tnfsf8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	Cd30l; CD153; CD30LG	Cd30l; CD153; CD30LG
Mus musculus	MEEBO	ILMN_191121	ILMN_191121	4930544M13RIK	scl44344.8.1_104				31340635	NM_175218	4930544M13Rik		ILMN_2680694	003450224	S	711	TATCTTCACGAGTGAGTCACGTATCATCCCGTTGTATGTCCCAGACTACA										
Mus musculus	MEEBO	ILMN_191121	ILMN_191121	4930544M13RIK	scl44344.8.1_104				31340635	NM_175218	4930544M13Rik		ILMN_2476291	007560463	S	2	TCCCTGTAGAGATCTACTACTAATTCCTATGTGAACTTTACTCTTTGCAA										
Mus musculus	RefSeq	ILMN_255709	ILMN_255709	ASB1	NM_001039126.2	NM_001039126.2		65247	103472023	NM_001039126.2	Asb1	NP_001034215.1	ILMN_3069767	005810189	I	147	GAAACGCCGGCGGTGCTTCTCTGACAGCGTTGCTCTCTGACAGGATTGCT	1	+	93437288-93437337	1qD	Mus musculus ankyrin repeat and SOCS box-containing 1 (Asb1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]		AI426616; mKIAA1146; AI851378; 1700054C17Rik; 1700029O08Rik	AI426616; mKIAA1146; AI851378; 1700054C17Rik; 1700029O08Rik
Mus musculus	RefSeq	ILMN_196455	ILMN_196455	4930456L15RIK	XM_131534.1	XM_131534.1			20840677	XM_131534.1	4930456L15Rik		ILMN_2524281	000540433	S	701	GTCCTCAGTGCTGCAGCTCATTTGCAGGATGTCTCCAAGTGGACCGTGTC										
Mus musculus	RefSeq	ILMN_213647	ILMN_213647	ORC5L	NM_011959.2	NM_011959.2		26429	133893201	NM_011959.2	Orc5l	NP_036089.1	ILMN_1253844	004880446	S	1711	CTATCCCCTGCGCTTTGAACGTGCCAGCAGCCCTTGTTTATTTGCCCAGC	5	-	21992605-21992654	5qA3	Mus musculus origin recognition complex, subunit 5-like (S. cerevisiae) (Orc5l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Orc5; MmORC5; AL033327	Orc5; MmORC5; AL033327
Mus musculus	RefSeq	ILMN_213647	ILMN_213647	ORC5L	NM_011959.2	NM_011959.2		26429	133893201	NM_011959.2	Orc5l	NP_036089.1	ILMN_1221363	001990224	S	1694	GTGTTTTGCTCTATGAACTATCCCCTGCGCTTTGAACGTGCCAGCAGCCC	5	-	21992622-21992671	5qA3	Mus musculus origin recognition complex, subunit 5-like (S. cerevisiae) (Orc5l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Orc5; MmORC5; AL033327	Orc5; MmORC5; AL033327
Mus musculus	RefSeq	ILMN_216135	ILMN_216135	CASP6	NM_009811.2	NM_009811.2		12368	31981864	NM_009811.2	Casp6	NP_033941.2	ILMN_2923865	004480646	S	675	GGCTCCTGGTACATTCAGGATTTGTGTGAGATGCTGGCGAGGTACGGCAG	3	+	129616279-129616328	3qG3	Mus musculus caspase 6 (Casp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]	Mch2; mCASP-6	Mch2; mCASP-6
Mus musculus	RefSeq	ILMN_216135	ILMN_216135	CASP6	NM_009811.2	NM_009811.2		12368	31981864	NM_009811.2	Casp6	NP_033941.2	ILMN_2923864	001820035	S	784	TGGACTTCTGCAAAGACCCGGATGCAATCGGCAAGAAGCAGGTGCCCTGC	3	+	129616388-129616437	3qG3	Mus musculus caspase 6 (Casp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]	Mch2; mCASP-6	Mch2; mCASP-6
Mus musculus	RefSeq	ILMN_197688	ILMN_197688	LOC381485	XM_355438.1	XM_355438.1			38077401	XM_355438.1	LOC381485		ILMN_2529012	002470338	S	677	TGCTGTACTTGTGGGAAGCAACGATAGAGTCCAGGGTGTGATCAGCCAGC										
Mus musculus	RefSeq	ILMN_216786	ILMN_236100	KLHL29	XM_978355.1	XM_978355.1		208439	94392543	XM_978355.1	Klhl29	XP_983449.1	ILMN_1250099	004590563	S	6946	GTCGACACTAATGATGCGCTGACCACCATGCTAAGCTCTCAAAGCCCTGA				12qA1.1	PREDICTED: Mus musculus kelch-like 29 (Drosophila) (Klhl29), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_206035	ILMN_206035	ZIC2	ri|D030057J08|PX00181D16|AK051032|2617					AK051032	Zic2		ILMN_1252072	006580025	S	2249	GGCCTATTGTTCTCTTTTGGGAAGGGAGGGAGGCGAGGTGCGAGACAAGC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210239	ILMN_309841	1700125D06RIK	NM_001085491.1	NM_001085491.1		68233	148230321	NM_001085491.1	1700125D06Rik	NP_001078960.1	ILMN_2603608	004890367	S	350	ACGTCTACCTGGCCATGGGCGGGAGCCCCCGGGCCCGTGCTACCTGAGTG				4qD2.2	Mus musculus RIKEN cDNA 1700125D06 gene (1700125D06Rik), mRNA.				RP23-209C6.4	RP23-209C6.4
Mus musculus	RefSeq	ILMN_217052	ILMN_217052	AQP9	NM_022026.2	NM_022026.2		64008	31542135	NM_022026.2	Aqp9	NP_071309.1	ILMN_1214634	005810452	S	2468	CGGCGTTCCTCGATAACAGCAAGTTTCCCCAGGTGCTTTGCAAGACTAAC	9	-	70958594-70958643	9qD	Mus musculus aquaporin 9 (Aqp9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]	AI266899	AI266899
Mus musculus	RefSeq	ILMN_217806	ILMN_217806	D0HXS9928E	NM_138607.2	NM_138607.2		108160	141801249	NM_138607.2	D0HXS9928E	NP_613073.1	ILMN_2687799	005050326	S	840	GGCAACACGATGCAGCAGTTCCTACAGAAAGCACTAGAGATCTTGCGGAA	X	+	71560828-71560877	XqA7.3	Mus musculus DNA segment, human DXS9928E (D0HXS9928E), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			XAP-5	XAP-5
Mus musculus	RefSeq	ILMN_213047	ILMN_213047	FAIM	NM_011810.2	NM_011810.2		23873	31981397	NM_011810.2	Faim	NP_035940.2	ILMN_2632976	002120475	S	362	AGATGCCATAAGTGGCTTCGCATACGAGTACACGCTGGAAATTGATGGGA	9	+	98893020-98893069	9qE3.3	Mus musculus Fas apoptotic inhibitory molecule (Faim), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]		Faim-S; Faim-L	Faim-S; Faim-L
Mus musculus	RefSeq	ILMN_213047	ILMN_213047	FAIM	NM_011810.2	NM_011810.2		23873	31981397	NM_011810.2	Faim	NP_035940.2	ILMN_2976519	002850609	S	934	GTGGACCAAACCACTAACATCCCACAACAGTAACCTTGACTGTAGTTAAC	9	+	98902355-98902404	9qE3.3	Mus musculus Fas apoptotic inhibitory molecule (Faim), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]		Faim-S; Faim-L	Faim-S; Faim-L
Mus musculus	RefSeq	ILMN_191322	ILMN_191322	D4WSU132E	NM_138590.2	NM_138590.2		28027	31542480	NM_138590.2	D4Wsu132e	NP_613056.1	ILMN_1236246	006980056	S	2516	ACCTGTTAATGAGACGCTGGGATTGAATGCTGAGTTCCGGCCATGCCTGG	4	+	44944387-44944436	4qB1	Mus musculus DNA segment, Chr 4, Wayne State University 132, expressed (D4Wsu132e), mRNA.				Zcchc7	Zcchc7
Mus musculus	RefSeq	ILMN_191322	ILMN_191322	D4WSU132E	NM_138590.2	NM_138590.2		28027	31542480	NM_138590.2	D4Wsu132e	NP_613056.1	ILMN_2876235	000650131	S	2822	CCAAGCCCGGCTTTGCTTGCATCAGAGGCTGTTGGAATCTCTCTCTGTAC	4	+	44944693-44944742	4qB1	Mus musculus DNA segment, Chr 4, Wayne State University 132, expressed (D4Wsu132e), mRNA.				Zcchc7	Zcchc7
Mus musculus	RefSeq	ILMN_219814	ILMN_219814	PSKH1	NM_173432.2	NM_173432.2		244631	31982544	NM_173432.2	Pskh1	NP_775608.1	ILMN_2713872	000610647	S	3064	GGTCTGGTTGTGAGGATAAGACAGAGGGAGTTTAGTGTCCGGGCCTTTGA	8	+	108455520-108455569	8qD3	Mus musculus protein serine kinase H1 (Pskh1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	AW539964; E130013P03Rik	AW539964; E130013P03Rik
Mus musculus	RefSeq	ILMN_199580	ILMN_327972	OTTMUSG00000012631	NM_001099301.1	NM_001099301.1		383678	150010582	NM_001099301.1	OTTMUSG00000012631	NP_001092771.1	ILMN_1234176	002370025	S	403	TGTGAAGGCCAGCGCCATGGGAGGTCACATCGGAAGGGGAAACTCATAGG				2qA3	Mus musculus predicted gene, OTTMUSG00000012631 (OTTMUSG00000012631), mRNA.					
Mus musculus	RefSeq	ILMN_218655	ILMN_218655	NLRP2	NM_177690.3	NM_177690.3		232827	112821676	NM_177690.3	Nlrp2	NP_808358.2	ILMN_2698602	002000687	S	3309	TCTATGTATAAAACTCACAAATGTCATTAAACAGGAATAAATGTAAAACA	7	-	5250194-5250243	7qA1	Mus musculus NLR family, pyrin domain containing 2 (Nlrp2), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Nalp2; E330007A02Rik; PYPAF2; PAN1; NBS1	Nalp2; E330007A02Rik; PYPAF2; PAN1; NBS1
Mus musculus	RefSeq	ILMN_210925	ILMN_210925	SMAD2	NM_010754.4	NM_010754.4		17126	146134489	NM_010754.4	Smad2	NP_034884.2	ILMN_1228414	004050274	S	2257	GCACTGCTGGCTTCTGGGTTAGTTGTTTCTGAGTCCAGGAAAGGTTTGTG				18qE3	Mus musculus MAD homolog 2 (Drosophila) (Smad2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IGI]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IGI]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP];  [goid 7182] [evidence ISO]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which the anatomical structures of the paraxial mesoderm are generated and organized. Morphogenesis pertains to the creation of form [goid 48340] [evidence IMP]; Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51098] [evidence IDA]	Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Madh2; Madr2	Madh2; Madr2
Mus musculus	RefSeq	ILMN_241100	ILMN_241100	WDR75	NM_028599.1	NM_028599.1		73674	83523741	NM_028599.1	Wdr75	NP_082875.1	ILMN_2849571	005290142	S	2496	GCTGGCTAACTGCTCTGTAGTAGGCCATGGCTGTGCCATGACAAAGAGAC	1	+	45768043-45768061:45768062-45768092	1qC1.1	Mus musculus WD repeat domain 75 (Wdr75), mRNA. XM_899942 XM_899949 XM_905443 XM_919350 XM_919365 XM_919374 XM_919385 XM_919393 XM_919402				FLJ12545; 1300003A18Rik; MGC143988; C77608; 2410118I19Rik	FLJ12545; 1300003A18Rik; MGC143988; C77608; 2410118I19Rik
Mus musculus	RefSeq	ILMN_199272	ILMN_199272	LOC272699	XM_195420.1	XM_195420.1			25046275	XM_195420.1	LOC272699		ILMN_2534648	003290601	S	289	CCAGATGAAGCAAGAAATCTGAAGGCCTATGGAGAGCTTCCAGAACATGC										
Mus musculus	MEEBO	ILMN_213158	ILMN_213158	IL1A	scl18675.7_38				47087136	NM_010554	Il1a		ILMN_1227018	002490553	S	282	AGCGCTCAAGGAGAAGACCAGCCCGTGTTGCTGAAGGAGTTGCCAGAAAC						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190015	ILMN_190015	9130208D14RIK	scl30870.1.1_3						9130208D14Rik		ILMN_2466438	006590475	S	6	GCATCCAATCTCATAATATGTGAGGTACTCACTTATAAACGCACTCTAAA										
Mus musculus	MEEBO	ILMN_196138	ILMN_196138	4930482L21RIK	scl0074999.1_1						4930482L21Rik		ILMN_2521975	006770239	S	12	AGTCCCTGAATTTAATTTCCTTTCTGGCTTGGGTTATTTCTGGGCCACAG										
Mus musculus	RefSeq	ILMN_200260	ILMN_200260	LOC386087	XM_359064.1	XM_359064.1			38081133	XM_359064.1	LOC386087		ILMN_2538141	006290754	S	159	ACTGATTACAGGATCCCCAATGGAGGAGTTTGAGAACGGACTGAAGGAGC										
Mus musculus	RefSeq	ILMN_197326	ILMN_313181	A530006G24RIK	XR_034699.1	XR_034699.1		381384	149250040	XR_034699.1	A530006G24Rik		ILMN_1244108	004010156	S	1446	GGCCCTGGTGGTAATGGCTTGGGGTGTATGAAGAACTTTGGAGGCACACC	2	+	147542984-147543033	2qG2	PREDICTED: Mus musculus RIKEN cDNA A530006G24 gene (A530006G24Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_210179	ILMN_252404	9430016H08RIK	XM_907464.2	XM_907464.2		68115	94363559	XM_907464.2	9430016H08Rik	XP_912557.1	ILMN_1238912	007650673	S	1166	AGTGGAGCCAATGTGTTCCAGGTGAAGCTGGGGGATCAGAGTGTGGAAAC				1qC1.3	PREDICTED: Mus musculus RIKEN cDNA 9430016H08 gene, transcript variant 3 (9430016H08Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]				
Mus musculus	MEEBO	ILMN_190717	ILMN_190717	MJ-7000-182_643	MJ-7000-182_643						MJ-7000-182_643		ILMN_2472664	003940221	S	4	GCTGCGGGTATTATCTCCAGTTACTTACATCACACCACTCCAGATGTAGG										
Mus musculus	RefSeq	ILMN_206232	ILMN_246341	CDC40	XM_899512.2	XM_899512.2		71713	94387953	XM_899512.2	Cdc40	XP_904605.1	ILMN_1244225	004670379	S	1793	GGTGTACATCATGAGTTCCAGGACTGCGAGAGCTATAGAGAGCCTGTCTC	10	-	40544811-40544860	10qB1	PREDICTED: Mus musculus cell division cycle 40 homolog (yeast), transcript variant 3 (Cdc40), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]			
Mus musculus	RefSeq	ILMN_219741	ILMN_219741	FAM131A	NM_133778.2	NM_133778.2		78408	142345536	NM_133778.2	Fam131a	NP_598539.1	ILMN_2713060	004920079	S	2144	GGCTTGGGCAACAGGTAAGAGGATCCAAGGTGAAAATATGAGCCAACAGC	16	+	20702982-20703031	16qB1	Mus musculus family with sequence similarity 131, member A (Fam131a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	Riken	ILMN_202308	ILMN_202308	9130022B02RIK	ri|9130022B02|PX00026E20|AK018642|2632					AK018642	9130022B02Rik		ILMN_2548594	002510010	S	1062	TGCTGAGGTGCTACCCCAGTCTCTAGCGGGGCAGGACACCTGCTTAGTGA										
Mus musculus	RefSeq	ILMN_195031	ILMN_231319	CBFA2T3H	NM_009824.1	NM_009824.1		12398	6753301	NM_009824.1	Cbfa2t3h	NP_033954.1	ILMN_2765538	003830041	S	90	TGCAGCTCCATGTCCCAGGCATCCACCACCACTCTGGAGAGTGGGGCACT	8	-	125222740-125222789	8qE1	Mus musculus core-binding factor, runt domain, alpha subunit 2, translocated to, 3 homolog (human) (Cbfa2t3h), mRNA.				ETO-2; A630044F12Rik; MTGR2	ETO-2; A630044F12Rik; MTGR2
Mus musculus	RefSeq	ILMN_231319	ILMN_231319	CBFA2T3H	NM_009824.1	NM_009824.1		12398	6753301	NM_009824.1	Cbfa2t3h	NP_033954.1	ILMN_2881486	003840278	S	2561	CCCAGGGGCATCAGCGAGCACACAGCAGGAAGATAATGAGAGGCAAACTG	8	-	125153945-125153994	8qE1	Mus musculus core-binding factor, runt domain, alpha subunit 2, translocated to, 3 homolog (human) (Cbfa2t3h), mRNA.				ETO-2; A630044F12Rik; MTGR2	ETO-2; A630044F12Rik; MTGR2
Mus musculus	RefSeq	ILMN_195031	ILMN_231319	CBFA2T3H	NM_009824.1	NM_009824.1		12398	6753301	NM_009824.1	Cbfa2t3h	NP_033954.1	ILMN_1216136	005890110	S	2335	CGGCGTCTCTGTCTTTGTAAAGTCCACATGATCTCTCTGTCATCAGAGAA	8	-	125154171-125154220	8qE1	Mus musculus core-binding factor, runt domain, alpha subunit 2, translocated to, 3 homolog (human) (Cbfa2t3h), mRNA.				ETO-2; A630044F12Rik; MTGR2	ETO-2; A630044F12Rik; MTGR2
Mus musculus	MEEBO	ILMN_186051	ILMN_186051	EPB4.1	scl23745.1.1_303				38570128	NM_183428	Epb4.1		ILMN_2432200	000870754	S	5	GCCTGTGTTGCCTAGTTGGTTGCATAGATTTAAGATTAGGCATTTAAGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISS]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISS]; Interacting selectively with spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers [goid 30507] [evidence ISS]		
Mus musculus	RefSeq	ILMN_197386	ILMN_197386	LOC380882	XM_354791.1	XM_354791.1			38075520	XM_354791.1	LOC380882		ILMN_1224245	000840709	S	2915	GCTCCACATGCCCAAGGGGAAAGAACTTCCATGTTGTACAGATGCAGGAA										
Mus musculus	RefSeq	ILMN_197827	ILMN_243274	LOC230628	XM_904152.2	XM_904152.2		230628	94372266	XM_904152.2	LOC230628	XP_909245.1	ILMN_1224834	004610519	S	2122	GGCAGCCCCAGCTTTTGTGAGGCTAAATTTCAGAGCCAGGGGCATAGTGG					PREDICTED: Mus musculus similar to C05G5.5 (LOC230628), mRNA.					
Mus musculus	RefSeq	ILMN_199882	ILMN_243274	LOC230628	XM_904152.2	XM_904152.2		230628	94372266	XM_904152.2	LOC230628	XP_909245.1	ILMN_1217500	007050286	S	225	CTGGATCGCAGAGGGACCTGAACTCCTTCCTGTGGACTATTCGGCGCCAT					PREDICTED: Mus musculus similar to C05G5.5 (LOC230628), mRNA.					
Mus musculus	RefSeq	ILMN_250101	ILMN_250101	EG547347	NM_001034909.2	NM_001034909.2		547347	142370648	NM_001034909.2	EG547347	NP_001030081.1	ILMN_3160553	005810612	S	1202	AGGACAACTCGCTTCCCAAGTGCCACCAAGAACCTCCCCACAAAGGCCCT	17	+	36195159-36195208	17qB1	Mus musculus predicted gene, EG547347 (EG547347), mRNA.				H2-gs14-2	H2-gs14-2
Mus musculus	MEEBO	ILMN_219898	ILMN_219898	BC027246	scl0234736.4_181				31542199	NM_146218	BC027246		ILMN_1244239	001780148	S	1942	CTTGGAGCCAGGGGGCTTTGTAGACTTTCAGACAGAGAGCAGCACCCGAC										
Mus musculus	RefSeq	ILMN_217162	ILMN_217162	KRT75	NM_133357.1	NM_133357.1		109052	29789316	NM_133357.1	Krt75	NP_579935.1	ILMN_2679758	006400220	S	2799	GGTGTTTGGTCAGGGTGGGCTTGTCACATAGGATTACTGATAGGAGCTGC	15	-	101391796-101391845	15qF2	Mus musculus keratin 75 (Krt75), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krtcap1; 4732468K03Rik; Krt2-6hf; AA589387	Krtcap1; 4732468K03Rik; Krt2-6hf; AA589387
Mus musculus	Riken	ILMN_206459	ILMN_206459	D130084E01RIK	ri|D130084E01|PX00187A24|AK084078|3206					AK084078	D130084E01Rik		ILMN_2580229	002760433	S	2854	CCAAGCACTGGGTGACAGACAGCTGGATCCCTAAAGCTTCACAGCCAAAA										
Mus musculus	RefSeq	ILMN_199172	ILMN_199172	LOC327891	XM_284908.2	XM_284908.2			38091587	XM_284908.2	LOC327891		ILMN_1258679	001340379	S	1383	TGAGGCTTCACTCCAGCAACCAAACTCGACTTCGATGGACGAGGGACTGG										
Mus musculus	RefSeq	ILMN_196683	ILMN_255218	CLN6	NM_001033175.2	NM_001033175.2		76524	142372439	NM_001033175.2	Cln6	NP_001028347.1	ILMN_2525382	000380220	S	1808	CTCTTGAGACAGCACATCTCAGCCTGAATCTCTCACCACCTGCCTGGTGC	9	+	62699481-62699530	9qB	Mus musculus ceroid-lipofuscinosis, neuronal 6 (Cln6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence ISS]	Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement [goid 31987] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a macromolecule, any large molecule including proteins, nucleic acids and carbohydrates, as carried out by individual cells [goid 44265] [evidence IMP]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence ISS]; Any process that reduces the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion [goid 7042] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45862] [evidence ISS]; The chemical reactions and pathways involving ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1573] [evidence ISS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]	D9Bwg1455e; 1810065L06Rik; nclf; AW743417	D9Bwg1455e; 1810065L06Rik; nclf; AW743417
Mus musculus	RefSeq	ILMN_219485	ILMN_219485	PROKR2	NM_144944.2	NM_144944.2		246313	31542916	NM_144944.2	Prokr2	NP_659193.2	ILMN_2810904	002630402	S	2881	GTCCAGGACACAAATAACCTCTCCAGTAGACACTGTACCCTTCACATGTC	2	-	132197620-132197669	2qF2	Mus musculus prokineticin receptor 2 (Prokr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence TAS]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]	PKR2; Gpr73l1; B830005M06Rik; EG-VEGRF2	PKR2; Gpr73l1; B830005M06Rik; EG-VEGRF2
Mus musculus	MEEBO	ILMN_222352	ILMN_222352	4833412L08RIK	scl0108861.1_10	NM_175376.2			31341739	NM_175376.2	4833412L08Rik		ILMN_2748373	003940671	S	1016	AAGGGACTCGTTTCCATGTCCCCGCTATTCCCCCAGACCGCACTCCCCGT										
Mus musculus	RefSeq	ILMN_240005	ILMN_240005	OLFR412	NM_001011851.1	NM_001011851.1		258153	58801459	NM_001011851.1	Olfr412	NP_001011851.1	ILMN_3160736	000360575	S	879	CAAGGACATGCACGGGGCTCTGGGAAGACTGCTAAGGAAGCCACTTCAGA	11	+	74179051-74179100	11qB5	Mus musculus olfactory receptor 412 (Olfr412), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR127-5P	MOR127-5P
Mus musculus	MEEBO	ILMN_191910	ILMN_191910	SCL0003485.1_41	scl0003485.1_41	XM_134957.4			38089863	XM_134957.4	scl0003485.1_41		ILMN_2483294	001850520	S	17	GCGTCAGACTCACAGAGATCCACCTGCCTTACCAATCAAGTGCTGTGAAC										
Mus musculus	Riken	ILMN_205012	ILMN_205012	9830164L14RIK	ri|9830164L14|PX00118P16|AK036699|3599					AK036699	9830164L14Rik		ILMN_1259932	006060341	S	3318	AATTTGCCGGAGACTCGAAACCCAGGTCATCACACGCATAGGAGATGCCG										
Mus musculus	Riken	ILMN_205069	ILMN_205069	D330002C20RIK	ri|D330002C20|PX00190P07|AK052165|3642					AK052165	D330002C20Rik		ILMN_1234213	007050170	S	3441	GCCACCTCTGGGCACTGGTGCTATAAGACTGCAACTGAGAAGCCATGAGG										
Mus musculus	RefSeq	ILMN_212634	ILMN_212634	SERPINC1	NM_080844.2	NM_080844.2		11905	31559996	NM_080844.2	Serpinc1	NP_543120.1	ILMN_2806976	004050040	S	1698	GCAGAGTGAAAGACCATGTCTCAAGATGGTCTTTCTCCTCCCCAAAGTAG	1	+	162839386-162839435	1qH2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 (Serpinc1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	AI114908; ATIII; At3; At-3	AI114908; ATIII; At3; At-3
Mus musculus	RefSeq	ILMN_211175	ILMN_211175	BAHCC1	NM_198423.2	NM_198423.2		268515	49274629	NM_198423.2	Bahcc1	NP_940815.2	ILMN_1242613	001090484	S	5871	AGGTCCCCCCATCCTTTTCCTTTCTTTCTGTGTGTACACGCAAATGGCGT	11	+	120153316-120153365	11qE2	Mus musculus BAH domain and coiled-coil containing 1 (Bahcc1), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC79150; B930044J06; KIAA1447; BC060615	MGC79150; B930044J06; KIAA1447; BC060615
Mus musculus	RefSeq	ILMN_219050	ILMN_219050	PLXNA3	NM_008883.2	NM_008883.2		18846	124286838	NM_008883.2	Plxna3	NP_032909.2	ILMN_2703546	004250112	S	5371	AATCCGCAATTTGTGTTTGACATCCATAAGAATAGCATCACAGACGCCTG	X	+	71582342-71582391	XqA7.3	Mus musculus plexin A3 (Plxna3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IGI]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The progression of a pyramidal neuron from its initial formation to its mature state [goid 21860] [evidence IMP]		Plxn3; SEX; KIAA4078; Plxn4; mKIAA4078	Plxn3; SEX; KIAA4078; Plxn4; mKIAA4078
Mus musculus	RefSeq	ILMN_198194	ILMN_248929	GM546	XM_914449.2	XM_914449.2		224908	94403037	XM_914449.2	Gm546	XP_919542.2	ILMN_1228144	004490156	S	1038	ACCTGCTGTCCTTTGACTACAGTGTCCCCGAGATCCTAGATGCGGTGGCC				17qD	PREDICTED: Mus musculus gene model 546, (NCBI) (Gm546), mRNA.					
Mus musculus	RefSeq	ILMN_185841	ILMN_254274	BTBD3	NM_001025431.1	NM_001025431.1		228662	70906456	NM_001025431.1	Btbd3	NP_001020602.1	ILMN_2430465	003290288	S	63	TCGCCCGCCGGGCTCTGGATCCCTGAGTTCCTGGACCGGGCCTGCGGAGC	2	+	138082382-138082431	2qF3	Mus musculus BTB (POZ) domain containing 3 (Btbd3), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC25591; mKIAA0952	MGC25591; mKIAA0952
Mus musculus	RefSeq	ILMN_209090	ILMN_254274	BTBD3	NM_001025431.1	NM_001025431.1		228662	70906456	NM_001025431.1	Btbd3	NP_001020602.1	ILMN_1227043	005810327	S	1955	GAGATCGTGTGCTTTTCCAAGTGCCCACCAACCTCCTACTTCTGTACCTC	2	+	138110475-138110524	2qF3	Mus musculus BTB (POZ) domain containing 3 (Btbd3), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC25591; mKIAA0952	MGC25591; mKIAA0952
Mus musculus	RefSeq	ILMN_208694	ILMN_208694	TXNDC11	NM_029582.2	NM_029582.2		106200	118130624	NM_029582.2	Txndc11	NP_083858.1	ILMN_2588663	003390343	S	1360	TGGGTGGTACCAGGCCTAGCTCAGTGAGTGTGCCACAGTGCAGCTTCTTC	16	-	11088371-11088420	16qA1	Mus musculus thioredoxin domain containing 11 (Txndc11), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		2810408E11Rik; Txdc11; EFP1; AI427833	2810408E11Rik; Txdc11; EFP1; AI427833
Mus musculus	RefSeq	ILMN_208694	ILMN_208694	TXNDC11	NM_029582.2	NM_029582.2		106200	118130624	NM_029582.2	Txndc11	NP_083858.1	ILMN_1216473	001780424	S	817	CAGTGCGATTTGGGGTTATCACAGATAAACACCTTGCGAGACTGGTATCC	16	-	11093959-11094008	16qA1	Mus musculus thioredoxin domain containing 11 (Txndc11), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		2810408E11Rik; Txdc11; EFP1; AI427833	2810408E11Rik; Txdc11; EFP1; AI427833
Mus musculus	RefSeq	ILMN_221310	ILMN_221310	4930550L24RIK	NM_023774.2	NM_023774.2		75352	125347713	NM_023774.2	4930550L24Rik	NP_076263.1	ILMN_2733766	003780048	S	1053	TACTGCTGTGGACAATTCAGGTTCTGGGGACAAGCCCAGCAGTGTCTCCC	X	+	56173063-56173112	XqA6	Mus musculus RIKEN cDNA 4930550L24 gene (4930550L24Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mage-k1; MGC107266	mage-k1; MGC107266
Mus musculus	RefSeq	ILMN_209213	ILMN_209213	PSCD2	NM_011181.2	NM_011181.2		19158	31543517	NM_011181.2	Pscd2	NP_035311.1	ILMN_1251874	001340022	S	2363	CGTGTCAATAGACAGTGGCAGTCTTCACAGTGGCCGTCTTGTCTCCTAGG	7	-	53062091-53062140	7qB4	Mus musculus pleckstrin homology, Sec7 and coiled-coil domains 2 (Pscd2), mRNA.				CLM2	CLM2
Mus musculus	Riken	ILMN_204093	ILMN_204093	B230312L03RIK	ri|B230312L03|PX00159I16|AK045826|718					AK045826	B230312L03Rik		ILMN_1251968	005260139	S	355	GCACCCCACGCGCGGGCTCTGTGACTTTGGGTTTTGGTCTTTTTGTTTCG										
Mus musculus	RefSeq	ILMN_200977	ILMN_235933	LOC677172	XM_001001134.1	XM_001001134.1		677172	94381385	XM_001001134.1	LOC677172	XP_001001134.1	ILMN_2540672	002490100	S	349	CTGGGGACGCTCACACCCAGTGACATGGAGCCGCTTTACTCCCTGTTCTG					PREDICTED: Mus musculus similar to Mucin-2 precursor (Intestinal mucin 2) (LOC677172), mRNA.					
Mus musculus	RefSeq	ILMN_199883	ILMN_312330	9530048O09RIK	XR_035280.1	XR_035280.1		78611	149252870	XR_035280.1	9530048O09Rik		ILMN_2536832	005910014	S	750	CCATCGCTTTCTGGACCTTCGTTTCAAATGATCCACTTCCGGACCTTCCC	4	-	116793312-116793361	4qD1	PREDICTED: Mus musculus RIKEN cDNA 9530048O09 gene (9530048O09Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_199883	ILMN_312330	9530048O09RIK	XR_035280.1	XR_035280.1		78611	149252870	XR_035280.1	9530048O09Rik		ILMN_2611124	006860639	S	1290	AGGGGACAGTATCCATCCCTATGATGGTCCCATCGCTTTGATTGTCAAGC	4	-	116792772-116792821	4qD1	PREDICTED: Mus musculus RIKEN cDNA 9530048O09 gene (9530048O09Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_261337	ILMN_261337	ANKRD6	NM_001012451.1	NM_001012451.1		140577	60218881	NM_001012451.1	Ankrd6	NP_001012454.1	ILMN_3030288	003140048	I	1	GTGGGGCGAGCGGCTGCGGGCAAGGAGCGCAGCGGCCCGCGAGCTCCGTG	4	-	33037751-33037800	4qA5	Mus musculus ankyrin repeat domain 6 (Ankrd6), transcript variant 3, mRNA.					
Mus musculus	RefSeq	ILMN_261337	ILMN_261337	ANKRD6	NM_001012451.1	NM_001012451.1		140577	60218881	NM_001012451.1	Ankrd6	NP_001012454.1	ILMN_3103575	006450349	A	3920	GGAAGGCTCTACTGTGTACTCTAGACTGTCTCAGCCACCTGAGTTCTGGG	4	-	32891484-32891533	4qA5	Mus musculus ankyrin repeat domain 6 (Ankrd6), transcript variant 3, mRNA.					
Mus musculus	RefSeq	ILMN_216258	ILMN_216258	PI16	NM_023734.3	NM_023734.3		74116	116089319	NM_023734.3	Pi16	NP_076223.3	ILMN_2669062	001230546	S	2121	TGTAGCTTGGACAGCAGACCCTGAGGGCAGGTGAAGAACAAGCCCCAACG	17	+	29465723-29465772	17qA3.3	Mus musculus peptidase inhibitor 16 (Pi16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	Cripi; 1200009H11Rik	Cripi; 1200009H11Rik
Mus musculus	RefSeq	ILMN_196396	ILMN_196396	1100001J08RIK	XM_126505.1	XM_126505.1			20913266	XM_126505.1	1100001J08Rik		ILMN_1217369	001300243	S	541	AACCTGCCCAGCACTTACTGGGATTTTGGCTCTGATCCTGATGCCCACTG										
Mus musculus	RefSeq	ILMN_223748	ILMN_223748	SLC16A12	NM_172838.3	NM_172838.3		240638	146198757	NM_172838.3	Slc16a12	NP_766426.1	ILMN_1225059	003310520	S	3794	TAGAATTTTATGAATGAATCAGATGTGTAGGCTAATATTTTCCTAGTTCA				19qC1	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 12 (Slc16a12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	3230401A21; AW210596	3230401A21; AW210596
Mus musculus	RefSeq	ILMN_203062	ILMN_242602	LOC674308	XM_974354.1	XM_974354.1		674308	94393382	XM_974354.1	LOC674308	XP_979448.1	ILMN_2554448	007380300	S	2035	TCTGTGCCACATGCCATGAGAGAAGGTGGGAACACACATCCCTTAGATGC					PREDICTED: Mus musculus similar to solute carrier family 39 (zinc transporter), member 9, transcript variant 4 (LOC674308), mRNA.					
Mus musculus	RefSeq	ILMN_189348	ILMN_242602	LOC674308	XM_974354.1	XM_974354.1		674308	94393382	XM_974354.1	LOC674308	XP_979448.1	ILMN_2489629	004730735	S	4726	AGAGCCCCAGACCATTGCATCACAGTCATTCGGCAAGAGGGTCCTTGCGG					PREDICTED: Mus musculus similar to solute carrier family 39 (zinc transporter), member 9, transcript variant 4 (LOC674308), mRNA.					
Mus musculus	RefSeq	ILMN_220627	ILMN_220627	SPATA6	NM_026470.3	NM_026470.3		67946	110347524	NM_026470.3	Spata6	NP_080746.3	ILMN_2724595	003440685	S	1657	GCTTCTGAGACCATCTACCATAAACTGTATAAGCGTCCATGTCAACCTCT	4	+	111500964-111500971:111500972-111501013	4qD1	Mus musculus spermatogenesis associated 6 (Spata6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		KRP; 1700062C23Rik; AI790763; Hash; Mash	KRP; 1700062C23Rik; AI790763; Hash; Mash
Mus musculus	Riken	ILMN_205245	ILMN_205245	E230030L05RIK	ri|E230030L05|PX00210D09|AK054210|3280					AK054210	E230030L05Rik		ILMN_1250684	002360575	S	2986	GTGTAGAGGAAACCAAGCTACAAGATACATGTCACAACTCCTGCAAGGCG										
Mus musculus	MEEBO	ILMN_219242	ILMN_219242	TAS2R118	scl0387347.1_262				46309592	NM_207022	Tas2r118		ILMN_2706111	001030195	S	767	GAAATCTTGGTTCTGGGTCTGCGAAGCTGTCATCTATGGTTTAGTCTGTA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_259015	ILMN_259015	TMEM204	NM_001001183.1	NM_001001183.1		407831	47564089	NM_001001183.1	Tmem204	NP_001001183.1	ILMN_3162005	005360750	S	1655	CATGAAGGGTCTGACAACCAGACCTTACCAGGTGGTACCGGTTTCATGCC	17	-	25194721-25194770	17qA3.3	Mus musculus transmembrane protein 204 (Tmem204), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_195961	ILMN_250560	CIAPIN1	NM_134141.4	NM_134141.4		109006	118129955	NM_134141.4	Ciapin1	NP_598902.1	ILMN_1232237	000110445	S	1987	CCTTGTGTTACCTCCCCTCCAATTACAGCAAACCCTGAAAACCTCTGGTG	8	-	97346008-97346057	8qC5	Mus musculus cytokine induced apoptosis inhibitor 1 (Ciapin1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]		2810413N20Rik; MGC29983; AA617265; AU021794; anamorsin	2810413N20Rik; MGC29983; AA617265; AU021794; anamorsin
Mus musculus	RefSeq	ILMN_195961	ILMN_250560	CIAPIN1	NM_134141.4	NM_134141.4		109006	118129955	NM_134141.4	Ciapin1	NP_598902.1	ILMN_2674095	002850482	S	1264	GGGAAGAGGGTGGATGCGCCTAAGGAACTCTGCTCCTGGTGTTACAGTGC	8	-	97346731-97346780	8qC5	Mus musculus cytokine induced apoptosis inhibitor 1 (Ciapin1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]		2810413N20Rik; MGC29983; AA617265; AU021794; anamorsin	2810413N20Rik; MGC29983; AA617265; AU021794; anamorsin
Mus musculus	RefSeq	ILMN_186363	ILMN_186363	TOX3	NM_172913.2	NM_172913.2		244579	142343779	NM_172913.2	Tox3	NP_766501.1	ILMN_2434900	000520044	S	3017	GAGGCTTTAACGTAAACACTGGTGACATAAACCATTCATTGCTACCTTGC	8	-	92771137-92771186	8qC4	Mus musculus TOX high mobility group box family member 3 (Tox3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C230068E13; BC052044; Tnrc9; CAGF9	C230068E13; BC052044; Tnrc9; CAGF9
Mus musculus	RefSeq	ILMN_189490	ILMN_189490	TNFRSF1B	NM_011610.3	NM_011610.3		21938	76253923	NM_011610.3	Tnfrsf1b	NP_035740.2	ILMN_1255973	000290484	S	160	CCCTACAAACCGGAACCTGGGTACGAGTGCCAGATCTCACAGGAATACTA	4	-	144818947-144818996	4qE1	Mus musculus tumor necrosis factor receptor superfamily, member 1b (Tnfrsf1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; Any process that decreases the stability of an RNA molecule, making it more vulnerable to degradative processes [goid 50779] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence IPI]	TNF-R-II; TNFR80; Tnfr2; TNF-R2; TNF-R75; p75; CD120b; TNFBR; Tnfr-1; TNFRII	TNF-R-II; TNFR80; Tnfr2; TNF-R2; TNF-R75; p75; CD120b; TNFBR; Tnfr-1; TNFRII
Mus musculus	RefSeq	ILMN_189490	ILMN_189490	TNFRSF1B	NM_011610.3	NM_011610.3		21938	76253923	NM_011610.3	Tnfrsf1b	NP_035740.2	ILMN_2485839	002230463	S	3182	TGCTGACCTATAACACATTCCTAAAGGATGGGCAGTCCAGAATCTCCCTC	4	-	144803952-144804001	4qE1	Mus musculus tumor necrosis factor receptor superfamily, member 1b (Tnfrsf1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; Any process that decreases the stability of an RNA molecule, making it more vulnerable to degradative processes [goid 50779] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence IPI]	TNF-R-II; TNFR80; Tnfr2; TNF-R2; TNF-R75; p75; CD120b; TNFBR; Tnfr-1; TNFRII	TNF-R-II; TNFR80; Tnfr2; TNF-R2; TNF-R75; p75; CD120b; TNFBR; Tnfr-1; TNFRII
Mus musculus	MEEBO	ILMN_211416	ILMN_211416	C330008K14RIK	scl077619.4_0				51770855	XM_128979	C330008K14Rik		ILMN_2618148	002190280	S	671	AGACACAGACTTGACACTCCCTCCCCTTTGGGGCCTGCTTCAAATCACAG										
Mus musculus	RefSeq	ILMN_213132	ILMN_213132	EPHA1	NM_023580.4	NM_023580.4		13835	146141154	NM_023580.4	Epha1	NP_076069.2	ILMN_2633996	001090047	S	2075	CGAGAGGCAACTATCATGGGCCAGTTCAACCACCCACACATTCTACGCCT				6qB2.1	Mus musculus Eph receptor A1 (Epha1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Esk; 5730453L17Rik; AL033318; Eph	Esk; 5730453L17Rik; AL033318; Eph
Mus musculus	RefSeq	ILMN_213132	ILMN_213132	EPHA1	NM_023580.4	NM_023580.4		13835	146141154	NM_023580.4	Epha1	NP_076069.2	ILMN_2686924	003440376	S	295	CCACTGGCTTCGCTCCAATTGGATCTACCGCGGAGAGGAAGCTTCACGCA				6qB2.1	Mus musculus Eph receptor A1 (Epha1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Esk; 5730453L17Rik; AL033318; Eph	Esk; 5730453L17Rik; AL033318; Eph
Mus musculus	RefSeq	ILMN_213132	ILMN_213132	EPHA1	NM_023580.4	NM_023580.4		13835	146141154	NM_023580.4	Epha1	NP_076069.2	ILMN_2749705	006620402	S	2436	GGACAGCCCCAGAAGCTATTGCCCATCGGATCTTCACCACAGCCAGTGAT				6qB2.1	Mus musculus Eph receptor A1 (Epha1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Esk; 5730453L17Rik; AL033318; Eph	Esk; 5730453L17Rik; AL033318; Eph
Mus musculus	RefSeq	ILMN_210764	ILMN_210764	PER2	NM_011066.3	NM_011066.3		18627	153792235	NM_011066.3	Per2	NP_035196.2	ILMN_1258523	005860553	S	3743	GAGAGGTTCATCCGTGGGTCCACACTGGGGGCCTGCCTACGGCCATCGAT				1qD	Mus musculus period homolog 2 (Drosophila) (Per2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0347; mPer2	mKIAA0347; mPer2
Mus musculus	RefSeq	ILMN_255921	ILMN_255921	MGC107098	NM_001017393.1	NM_001017393.1		434935	62860011	NM_001017393.1	MGC107098	NP_001017393.1	ILMN_2922284	006960474	S	920	TTCCTGGGTGCAGTACACCAGAGATGATGGATCCAAAAAGTTCAGAAAGG	Y	+	121322-121371		Mus musculus similar to spermiogenesis specific transcript on the Y 2 (MGC107098), mRNA.				MGC151463; MGC118215	MGC151463; MGC118215
Mus musculus	RefSeq	ILMN_219105	ILMN_219105	CNOT2	NM_028082.1	NM_028082.1		72068	21312479	NM_028082.1	Cnot2	NP_082358.1	ILMN_2729503	005910543	S	531	GGATTTGGAATGAACAGGAATCAGGCATTTGGAATGAATAACTCCTTATC	10	-	115941113-115941162	10qD2	Mus musculus CCR4-NOT transcription complex, subunit 2 (Cnot2), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650
Mus musculus	RefSeq	ILMN_219105	ILMN_219105	CNOT2	NM_028082.1	NM_028082.1		72068	21312479	NM_028082.1	Cnot2	NP_082358.1	ILMN_1241657	003840315	S	2074	GAAAGGCGGTTTGGCCAGGCTTACTGCAGGCATCCGACTGTAGAGATCGC	10	-	115922709-115922758	10qD2	Mus musculus CCR4-NOT transcription complex, subunit 2 (Cnot2), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650
Mus musculus	RefSeq	ILMN_219105	ILMN_219105	CNOT2	NM_028082.1	NM_028082.1		72068	21312479	NM_028082.1	Cnot2	NP_082358.1	ILMN_2704360	004560347	S	2071	CTGAAAGGCGGTTTGGCCAGGCTTACTGCAGGCATCCGACTGTAGAGATC	10	-	115922712-115922761	10qD2	Mus musculus CCR4-NOT transcription complex, subunit 2 (Cnot2), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650
Mus musculus	RefSeq	ILMN_210759	ILMN_210759	INSL5	NM_011831.2	NM_011831.2		23919	141803022	NM_011831.2	Insl5	NP_035961.1	ILMN_2608858	005550114	S	416	CCATGAAGGAACTCAGCACCCTCTGTTAGGATGCGCCCAACCCCTTGGCA	4	-	102690697-102690718:102690719-102690746	4qC6	Mus musculus insulin-like 5 (Insl5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	RIF2	RIF2
Mus musculus	RefSeq	ILMN_199569	ILMN_199569	LOC383654	XM_357173.1	XM_357173.1			38074460	XM_357173.1	LOC383654		ILMN_1245581	006980706	S	395	CGTATGTTCTGTGGCGCTTCTCATCTAGCATCGTGAACATTCCGGGGCAG										
Mus musculus	RefSeq	ILMN_251220	ILMN_251220	TTLL4	NM_001014974.1	NM_001014974.1		67534	62510078	NM_001014974.1	Ttll4	NP_001014974.1	ILMN_3160783	005270681	S	3945	TCACTGACTCCCGCTTGACTGCTGTGAGCTCGTGACTGGTCCTGCACAGG	1	+	74744239-74744273:74744274-74744288	1qC3	Mus musculus tubulin tyrosine ligase-like family, member 4 (Ttll4), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	AI451681; mKIAA0173; 4632407P03Rik	AI451681; mKIAA0173; 4632407P03Rik
Mus musculus	RefSeq	ILMN_213572	ILMN_249387	LOC639715	XM_916269.3	XM_916269.3		639715	149274870	XM_916269.3	LOC639715	XP_921362.2	ILMN_2638509	005130753	S	659	GCTCTGACCCGATGCCGTCTGCCCCTCTGATACTCAGCTTCTGGATCATG					PREDICTED: Mus musculus similar to calpain large subunit (LOC639715), mRNA.					
Mus musculus	RefSeq	ILMN_186660	ILMN_260605	G3BP1	NM_013716.2	NM_013716.2		27041	118130851	NM_013716.2	G3bp1	NP_038744.1	ILMN_2774825	007040259	S	2471	CTGCTGTCTGTCAGGGTTCCTGCTGGGCCAGAAGAGAAATTTGGTTGAGT	11	+	55314175-55314224	11qB1.3	Mus musculus Ras-GTPase-activating protein SH3-domain binding protein 1 (G3bp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C87777; mKIAA4115; KIAA4115; RP23-336J1.4; AI849976; G3bp; B430204O07	C87777; mKIAA4115; KIAA4115; RP23-336J1.4; AI849976; G3bp; B430204O07
Mus musculus	RefSeq	ILMN_186660	ILMN_260605	G3BP1	NM_013716.2	NM_013716.2		27041	118130851	NM_013716.2	G3bp1	NP_038744.1	ILMN_2719888	003120446	S	444	GTTCACAACGACATCTTCAGGTACCAAGATGAGGTCTTCGGTGGCTTTGT	11	+	55305490-55305539	11qB1.3	Mus musculus Ras-GTPase-activating protein SH3-domain binding protein 1 (G3bp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C87777; mKIAA4115; KIAA4115; RP23-336J1.4; AI849976; G3bp; B430204O07	C87777; mKIAA4115; KIAA4115; RP23-336J1.4; AI849976; G3bp; B430204O07
Mus musculus	RefSeq	ILMN_191807	ILMN_191807	V1RC8	NM_053238.2	NM_053238.2		113865	110611164	NM_053238.2	V1rc8	NP_444468.2	ILMN_2482362	002260288	S	375	TGCTGTTTTCTATATTTGGTTTTATAATTTCTTGGTCTGTAGTCACCTGT	6	-	57928872-57928921	6qB3	Mus musculus vomeronasal 1 receptor, C8 (V1rc8), mRNA.		The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]		
Mus musculus	Riken	ILMN_206129	ILMN_206129	RAB3IP2-PENDING	ri|C630023J21|PX00084G24|AK083172|1346					AK083172	Rab3ip2-pending		ILMN_1250912	002810619	S	388	TGGACAAACGCTGAACAATGCAAGAAAACGAAGTCCATCAGTGTCCAGGG										
Mus musculus	RefSeq	ILMN_198543	ILMN_198543	LOC236737	XM_125381.2	XM_125381.2			38086094	XM_125381.2	LOC236737		ILMN_1224761	000830102	S	740	AGCTGCCTGTGGAGCCTGACTTGGTGGCAGAGACTGTAAGGGAGATGGTG										
Mus musculus	RefSeq	ILMN_212558	ILMN_240281	SHROOM3	NM_001077595.1	NM_001077595.1		27428	117606378	NM_001077595.1	Shroom3	NP_001071063.1	ILMN_3162511	005080187	S	5557	GCTGCAGGACTACCAGCACTTCGTGAAGATGAAGTCCACACTCCTCATTG	5	+	93393510-93393559	5qE2	Mus musculus shroom family member 3 (Shroom3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell over time, from its formation to the mature structure. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube [goid 2066] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	D5Ertd287e; Shrm; AL022960	D5Ertd287e; Shrm; AL022960
Mus musculus	MEEBO	ILMN_216631	ILMN_216631	SOX12	scl069985.1_46				54020661	NM_011438	Sox12		ILMN_2775281	003460300	S	569	TGGGCCGCCGCTGGCAGCTGCTGCAGGACTCGGAGAAGATCCCGTTCGAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	Riken	ILMN_204989	ILMN_204989	4632425I16RIK	ri|4632425I16|PX00102E07|AK028542|4222					AK028542	4632425I16Rik		ILMN_2569151	006650348	S	4172	GAAGCAGCAACTGGAAGCGGAGATGGAGCATAAGAAAGAGGAGACGAGAC										
Mus musculus	RefSeq	ILMN_211837	ILMN_211837	SDC2	NM_008304.2	NM_008304.2		15529	118130837	NM_008304.2	Sdc2	NP_032330.1	ILMN_2619983	006550209	S	3120	AGCTGCACAATGCCCCTCAATTACGGAGGCTGAGAATGTAGTGGGTATAC	15	+	32964283-32964332	15qB3.1	Mus musculus syndecan 2 (Sdc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	AA960457; Synd2; syndecan-2; 4833414L08Rik; Hspg1	AA960457; Synd2; syndecan-2; 4833414L08Rik; Hspg1
Mus musculus	RefSeq	ILMN_216534	ILMN_216534	9330176C04RIK	NM_175420.1	NM_175420.1		109280	46810286	NM_175420.1	9330176C04Rik	NP_780629.1	ILMN_3161528	006370242	S	1093	TTTGTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTGTAGGC	9	-	119129804-119129853	9qF3	Mus musculus RIKEN cDNA 9330176C04 gene (9330176C04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212331	ILMN_212331	OLFR486	NM_146496.1	NM_146496.1		258489	33239117	NM_146496.1	Olfr486	NP_666707.1	ILMN_2625215	004150239	S	672	CTTCATCACCATCTTGAAGATTCGTTCCACTGAGGGTCGCCAAAAAGCCT	7	-	115315535-115315584	7qE3	Mus musculus olfactory receptor 486 (Olfr486), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-19	MOR204-19
Mus musculus	Riken	ILMN_202796	ILMN_202796	4930415C24RIK	ri|4930415C24|PX00030G13|AK029623|4061					AK029623	4930415C24Rik		ILMN_2552364	005570349	S	3924	GGCTCTCCTAGGTGCCCTTAGAATCTAAATATGCTCTCGCAGTCAGTGGG										
Mus musculus	Riken	ILMN_202982	ILMN_202982	AKAP8	ri|5830471F14|PX00040B07|AK030964|3603					AK030964	Akap8		ILMN_1217938	001070220	S	3543	TTGGCTGCCTTTGCCACTGGGCACATTCTGTCACTTTGGAGAGAACCCGG						A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence ISO]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence ISO]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IDA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence ISO]		
Mus musculus	RefSeq	ILMN_217589	ILMN_237292	TIGD2	NM_001081145.1	NM_001081145.1		68140	124487250	NM_001081145.1	Tigd2	NP_001074614.1	ILMN_1260412	001110632	S	2606	CAAGATGACATGCTACTCTCTGATAAGCTGGTATTGCGGAGGCTTCGGAC	6	+	59161626-59161675	6qB3	Mus musculus tigger transposable element derived 2 (Tigd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	3632410O17Rik	3632410O17Rik
Mus musculus	MEEBO	ILMN_186200	ILMN_186200	SCL0002775.1_4	scl0002775.1_4	BC023366.1			19387923	BC023366.1	scl0002775.1_4		ILMN_2433480	007160068	S	11	GGCACATCTCAAGCCAATCGATATGTGGGACTAAGCCCAAGAGACCCATC										
Mus musculus	MEEBO	ILMN_221781	ILMN_221781	GNG5	scl014707.2_63	NM_010318.1			39930322	NM_010318.1	Gng5		ILMN_1253827	007650349	S	1928	GCCACCTAGAGAGGGGTTGATTCATGGTGGGGTGGATACCAACAAACTCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	MEEBO	ILMN_221781	ILMN_221781	GNG5	scl014707.2_63	NM_010318.1			39930322	NM_010318.1	Gng5		ILMN_2740257	005080195	S	2091	GTAAGCCATTTTCAAAAATTAAAAAGGAAATTGTCCTTGCTCAGGTATTA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218177	ILMN_218177	TGM2	NM_009373.3	NM_009373.3		21817	118130416	NM_009373.3	Tgm2	NP_033399.1	ILMN_2692615	007000187	S	3376	GCATTTAACGTGTTCTGCTTTACACAGAGGATCGCACCGTGAGCCGTGCT	2	-	157942264-157942313	2qH1	Mus musculus transglutaminase 2, C polypeptide (Tgm2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IMP]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence NAS]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]	tTGas; G[a]h; tTG; TG2	tTGas; G[a]h; tTG; TG2
Mus musculus	MEEBO	ILMN_191338	ILMN_191338	6530437J22RIK	scl9573.4.1_75						6530437J22Rik		ILMN_2478259	005670553	S	19	CTGGGGATCTCTGAAAGTATGAAGGCTGGCGAGCTACCTTGAGACCTGTA										
Mus musculus	RefSeq	ILMN_210916	ILMN_210916	OLFR133	NM_146831.1	NM_146831.1		258828	22129196	NM_146831.1	Olfr133	NP_667042.1	ILMN_1217953	004780082	S	872	CCCTGAGGAATAAGGATGTAAAGGGGGCATTAGGTAAACTATTCAGGAAC	17	+	38286406-38286455	17qB1	Mus musculus olfactory receptor 133 (Olfr133), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-6	MOR256-6
Mus musculus	RefSeq	ILMN_253543	ILMN_253543	GALNT9	NM_198306.1	NM_198306.1		231605	38142485	NM_198306.1	Galnt9	NP_938048.1	ILMN_2995549	000290196	S	1035	TGCACTTTTCTTCCCAAGGGTCAGCTAGGCACTCACTGGGCACGGGTCTC	5	+	111050247-111050296	5qF	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (Galnt9), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	6430598F23; GalNAc-T9	6430598F23; GalNAc-T9
Mus musculus	Riken	ILMN_202540	ILMN_202540	2410152H17RIK	ri|2410152H17|ZX00082K05|AK010813|699					AK010813	2410152H17Rik		ILMN_2550382	002570270	S	21	TGACAGCGCCTGGAAGTGGGACTGGAGGAGCCGGCGGAGGAGAAGATGGA										
Mus musculus	Riken	ILMN_202373	ILMN_202373	MSCP-PENDING	ri|4930513O14|PX00033O12|AK015790|1089					AK015790	Mscp-pending		ILMN_1216055	005310075	S	800	TTCTTCCGCTGTGAAGAGGAGGCAGACAGAGGGTTGAGACCTTCAGCCCC										
Mus musculus	Riken	ILMN_202677	ILMN_202677	SIAT7C	ri|D730049G17|PX00091O17|AK021356|866					AK021356	Siat7c		ILMN_1246543	002320239	S	740	CAGTGGCCACCGGTTGGAGAACTGGCTGGCTTTATTTCCTGTAGGTCACC										
Mus musculus	RefSeq	ILMN_211462	ILMN_211462	TRMT5	NM_029580.3	NM_029580.3		76357	148747366	NM_029580.3	Trmt5	NP_083856.1	ILMN_2616161	002000142	S	1615	GTTACTAAACACTTACGATTTGCTCTTATAAATGGAACATTACCAAAGTA				12qC3	Mus musculus TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) (Trmt5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methylguanine [goid 9019] [evidence IEA]	KIAA1393; 2610027O18Rik; mKIAA1393	KIAA1393; 2610027O18Rik; mKIAA1393
Mus musculus	RefSeq	ILMN_191403	ILMN_240658	4930563E22RIK	XM_618902.3	XM_618902.3		75304	94390195	XM_618902.3	4930563E22Rik	XP_618902.1	ILMN_2478764	004830743	S	1312	CATGCAACAAAGGGGAAAGTAAGACAACATGCTGTTGTATTCCCGCGAAG	11	+	72029951-72030000	11qB4	PREDICTED: Mus musculus RIKEN cDNA 4930563E22 gene, transcript variant 1 (4930563E22Rik), mRNA.					
Mus musculus	Riken	ILMN_206016	ILMN_206016	B130055K04RIK	ri|B130055K04|PX00158P23|AK045285|2091					AK045285	B130055K04Rik		ILMN_2576913	000130673	S	1851	CCTTGGTGCTGGGTGTGGGCATTCATCAATGAAGAGGGATTCTGCCCAGC										
Mus musculus	Riken	ILMN_205408	ILMN_205408	LAMA4	ri|E030047H14|PX00207H23|AK053234|2621					AK053234	Lama4		ILMN_1251062	003400707	S	2195	AGGACCCTTCCCCGACTCTGGCAGCACACTGGGCCATTAAACACTCATGT						A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	MEEBO	ILMN_219872	ILMN_219872	OLFR181	scl48359.1.1_208				22128942	NM_146999	Olfr181		ILMN_2775502	002630088	S	768	CATGTATATTGGACCATCCAAAAATAGTAACAAAGACATACCTGTAGGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199425	ILMN_199425	MRGPRA1	NM_153095.1	NM_153095.1		233221	23346520	NM_153095.1	Mrgpra1	NP_694735.1	ILMN_1230705	005090072	S	832	CTTGGATTTTATCTGGCATCAGTTGTCCTGACTGCTATTAATAGCTGTGC	7	-	54590451-54590500	7qB4	Mus musculus MAS-related GPR, member A1 (Mrgpra1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgA1	MrgA1
Mus musculus	RefSeq	ILMN_208966	ILMN_208966	FMO4	NM_144878.1	NM_144878.1		226564	21450116	NM_144878.1	Fmo4	NP_659127.1	ILMN_2591271	004480204	S	1655	GCTACCGAGAAGATTTCCCCCTTACCGATTACTGTGGTACATGCCCCAGA	1	-	164724096-164724145	1qH2.1	Mus musculus flavin containing monooxygenase 4 (Fmo4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]	MGC124274; MGC124273; D1Ertd532e	MGC124274; MGC124273; D1Ertd532e
Mus musculus	RefSeq	ILMN_210000	ILMN_210000	PRNPIP1	NM_080469.2	NM_080469.2		140546	33859764	NM_080469.2	Prnpip1	NP_536717.2	ILMN_2833388	005260369	S	1176	CTCTCCCTCACCAGAGGGAAAAGGGAGAGTGGCACAGCTCTGCGCCCAGA	4	+	117346488-117346537	4qD2.1	Mus musculus prion protein interacting protein 1 (Prnpip1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	PINT1	PINT1
Mus musculus	RefSeq	ILMN_210000	ILMN_210000	PRNPIP1	NM_080469.2	NM_080469.2		140546	33859764	NM_080469.2	Prnpip1	NP_536717.2	ILMN_2743837	006650215	S	1179	TCCCTCACCAGAGGGAAAAGGGAGAGTGGCACAGCTCTGCGCCCAGAGTG	4	+	117346491-117346540	4qD2.1	Mus musculus prion protein interacting protein 1 (Prnpip1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	PINT1	PINT1
Mus musculus	RefSeq	ILMN_210000	ILMN_210000	PRNPIP1	NM_080469.2	NM_080469.2		140546	33859764	NM_080469.2	Prnpip1	NP_536717.2	ILMN_1212720	006860390	S	239	TTGGGGCTTTCCAGCTCTCACAGACCCTTCAGCATCTCCAGCTGCCAGTC	4	+	117225574-117225623	4qD2.1	Mus musculus prion protein interacting protein 1 (Prnpip1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	PINT1	PINT1
Mus musculus	MEEBO	ILMN_195706	ILMN_195706	PEG10	scl00170676.1_7				51711788	XM_132985	Peg10		ILMN_2543043	002650747	S	1003	AGAGCCTTGGTGATGCCTCCAAACAGCCAGACCGATCCCACCGAGCCTGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites [goid 32196] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200316	ILMN_200316	LOC386210	XM_359120.1	XM_359120.1			38081292	XM_359120.1	LOC386210		ILMN_1215937	000380450	S	270	CCCAACTGCGCCCTCAGCAAGACACCTGAGCATCAATCACACGGAGCACC										
Mus musculus	RefSeq	ILMN_194215	ILMN_243752	CCDC93	NM_027567.2	NM_027567.2		70829	142352460	NM_027567.2	Ccdc93	NP_081843.1	ILMN_2714026	007040735	S	899	CAGATTCATGGAGTCTGGAGATGGCGCCTGTGCTGGACCCGTGAGAAGAG	1	+	123346191-123346240	1qE2.3	Mus musculus coiled-coil domain containing 93 (Ccdc93), transcript variant 2, mRNA.				9230102M16Rik; 4633402D15Rik	9230102M16Rik; 4633402D15Rik
Mus musculus	RefSeq	ILMN_222485	ILMN_222485	FFAR1	NM_194057.2	NM_194057.2		233081	110835700	NM_194057.2	Ffar1	NP_918946.2	ILMN_2750208	006040739	S	829	GGCTACTTGGGAACAGGTCCTGGACGGGGAACAATATGTGTGACGAGGAC	7	-	31645611-31645660	7qB1	Mus musculus free fatty acid receptor 1 (Ffar1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpr40	Gpr40
Mus musculus	MEEBO	ILMN_184204	ILMN_184204	A730004F22RIK	scl2765.1.1_168						A730004F22Rik		ILMN_2416701	000240170	S	20	ATTATGCTGGCTTTGCTAGAATTGGATACATTTGTATGAGCCGAGTATGA										
Mus musculus	MEEBO	ILMN_224077	ILMN_224077	KIT	scl27701.21_88				10947120	NM_021099	Kit		ILMN_1246876	000730193	S	4658	GGAGGTCCTGTTGTCATGTACGAGACTGTCACCAGTTACCGCGCTCTGTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence TAS]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IGI]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IMP]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with stem cell factor, a cytokine that stimulates mast cell growth and differentiation, to initiate a change in cell activity [goid 5020] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213835	ILMN_213835	MFN2	NM_133201.2	NM_133201.2		170731	120407047	NM_133201.2	Mfn2	NP_573464.2	ILMN_2641278	002450066	S	4293	TTAGGTGATGCATCCGCCTGGGTTACCTGTATCTCTGCTGATCATATTGG	4	-	147247738-147247787	4qE2	Mus musculus mitofusin 2 (Mfn2), nuclear gene encoding mitochondrial protein, mRNA. XM_919144 XM_919157 XM_919164	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [evidence IMP]; The initial formation of a blastocyst from a solid ball of cells known as a morula [goid 1825] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	D630023P19Rik; Fzo	D630023P19Rik; Fzo
Mus musculus	RefSeq	ILMN_199699	ILMN_199699	LOC383836	XM_357284.1	XM_357284.1			38076238	XM_357284.1	LOC383836		ILMN_2536159	004810709	S	150	GTGGCACCCCAAGAGCAATGAAGGACTCACACTGAGTCAAGTATCAGGCC										
Mus musculus	Riken	ILMN_206410	ILMN_206410	C230023B21RIK	ri|C230023B21|PX00173B08|AK082206|3277					AK082206	C230023B21Rik		ILMN_2579880	004230040	S	2772	TGTACTTGTCTGCGAGCGTCAGATACCTCACTCCGCTGTGACATCTGGGT										
Mus musculus	MEEBO	ILMN_193142	ILMN_193142	ZFP219	scl069890.1_204				30794417	NM_027248	Zfp219		ILMN_2494455	002510491	S	2	CTGTTAAGGAGCCGCTCTGCCAGTTCCTGCTGGTCCATAGGCATGAGAGT										
Mus musculus	RefSeq	ILMN_195673	ILMN_195673	TRPV6	NM_022413.3	NM_022413.3		64177	142374373	NM_022413.3	Trpv6	NP_071858.2	ILMN_2517665	005080010	S	2048	TCGTTGCCTGTGGCCTCGCTCTGGGATATGTGGGCGAGAGTATGGTCTTG	6	-	41573080-41573083:41573792-41573837	6qB2.1	Mus musculus transient receptor potential cation channel, subfamily V, member 6 (Trpv6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]	CaT1; CAT; Cac; Otrpc3; Ecac2	CaT1; CAT; Cac; Otrpc3; Ecac2
Mus musculus	RefSeq	ILMN_219137	ILMN_219137	RABGEF1	NM_019983.2	NM_019983.2		56715	31982702	NM_019983.2	Rabgef1	NP_064367.1	ILMN_1226143	006020730	S	2710	GCTGATTAGTACAGTTGACTTGGAACTGTGCTTGCAGCTTCCTTTCCCTG	5	+	130690108-130690157	5qG1.3	Mus musculus RAB guanine nucleotide exchange factor (GEF) 1 (Rabgef1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rabex5; Rin2; Rab5ef	Rabex5; Rin2; Rab5ef
Mus musculus	RefSeq	ILMN_221226	ILMN_221226	4930430A15RIK	NM_026248.2	NM_026248.2		67575	142347890	NM_026248.2	4930430A15Rik	NP_080524.1	ILMN_2732737	004780612	S	1690	CAATTGTATAGAAAAGGCTATAATTAAATATATTTTAGGTTACTTTGTTA	2	-	111033507-111033556	2qE3	Mus musculus RIKEN cDNA 4930430A15 gene (4930430A15Rik), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC159027	MGC159027
Mus musculus	RefSeq	ILMN_221285	ILMN_319133	LOC100046039	XM_001475447.1	XM_001475447.1		100046039	149252962	XM_001475447.1	LOC100046039	XP_001475497.1	ILMN_2733514	006620133	S	1493	AGGGCAGTGGTGCTAGGAGGGCTCTTCCCAGAGCGACCTTGTCCATCCTG					PREDICTED: Mus musculus similar to histone deacetylase HD1 (LOC100046039), mRNA.					
Mus musculus	RefSeq	ILMN_184725	ILMN_321829	LOC100043313	XM_001479515.1	XM_001479515.1		100043313	149257755	XM_001479515.1	LOC100043313	XP_001479565.1	ILMN_2421046	006290309	S	535	TCCTGCCCAACTGGATCCTTTTTATACTCAAGGAGATTCTCTGACTTCAG	7	-	123227359-123227408	7qF1	PREDICTED: Mus musculus similar to nucleoporin 35 (LOC100043313), mRNA.					
Mus musculus	RefSeq	ILMN_222457	ILMN_222457	H1FOO	NM_138311.2	NM_138311.2		171506	118129974	NM_138311.2	H1foo	NP_612184.1	ILMN_2749809	006620148	S	904	TACAACCCATACCTAGGGTCAGGAAGGCAAAGACCCCTGAGAACACTCAG	6	+	115900041-115900090	6qE3	Mus musculus H1 histone family, member O, oocyte-specific (H1foo), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; The nucleus of the female germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1674] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence ISA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	H1oo; H1fo; C86609	H1oo; H1fo; C86609
Mus musculus	RefSeq	ILMN_198370	ILMN_198370	LOC232143	XM_144890.2	XM_144890.2			38084588	XM_144890.2	LOC232143		ILMN_1243088	006590390	S	1165	CTTAAGGCCAGAACGGAGAGAGCTGCAGGACAGTGGGCCAACATGAGGCT										
Mus musculus	RefSeq	ILMN_217311	ILMN_217311	KCNC3	NM_008422.2	NM_008422.2		16504	133778991	NM_008422.2	Kcnc3	NP_032448.2	ILMN_2681742	002710246	S	1802	TCACCCCTCCTTCCATGGGGGTGAATGTGGCCGGGGCCTACCCACCTGGA	7	+	51851459-51851508	7qB4	Mus musculus potassium voltage gated channel, Shaw-related subfamily, member 3 (Kcnc3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KShIIID; Kv3.3; Kcr2-3	KShIIID; Kv3.3; Kcr2-3
Mus musculus	RefSeq	ILMN_210494	ILMN_311308	LOC100038984	XM_001472041.1	XM_001472041.1		100038984	149254674	XM_001472041.1	LOC100038984	XP_001472091.1	ILMN_2606189	006510221	S	300	CCTTCGGCGCATGGATATGGACACTGTCAAGGGTTGCCTCTCCGATGAAC	5	-	143412707-143412756	5qG2	PREDICTED: Mus musculus similar to testis/prostate/placenta-expressed protein, isoform 2 (LOC100038984), mRNA.					
Mus musculus	RefSeq	ILMN_209355	ILMN_209355	C5AR1	NM_007577.3	NM_007577.3		12273	76096368	NM_007577.3	C5ar1	NP_031603.2	ILMN_2595052	002100445	S	384	CACGACCGTTTTAAATCATAACTACTGGTACTTTGATGCCACCGCCTGTA	7	-	16834113-16834162	7qA2	Mus musculus complement component 5a receptor 1 (C5ar1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with anaphylatoxin C5a to initiate a change in cell activity [goid 4944] [evidence IDA]; Combining with anaphylatoxin to initiate a change in cell activity [goid 4942] [evidence IEA]	Cd88; C5aR; D7Msu1; C5r1	Cd88; C5aR; D7Msu1; C5r1
Mus musculus	RefSeq	ILMN_212740	ILMN_322271	LOC100047353	XM_001477963.1	XM_001477963.1		100047353	149261404	XM_001477963.1	LOC100047353	XP_001478013.1	ILMN_2705119	002030358	S	127	CATCACTGGTTCCCAGAAAAGCCGTGCAAGGGATCAGGTTACCGTTGTAT					PREDICTED: Mus musculus similar to myocardial vascular inhibition factor (LOC100047353), mRNA.					
Mus musculus	RefSeq	ILMN_212740	ILMN_322271	LOC100047353	XM_001477963.1	XM_001477963.1		100047353	149261404	XM_001477963.1	LOC100047353	XP_001478013.1	ILMN_2745073	005290367	S	1403	TCTATATTTTGGATGAGAAATTTTTCTTCTCTCTATAATAAATTGTTTCT					PREDICTED: Mus musculus similar to myocardial vascular inhibition factor (LOC100047353), mRNA.					
Mus musculus	RefSeq	ILMN_213616	ILMN_213616	1810074P20RIK	NM_026194.3	NM_026194.3		67490	142376271	NM_026194.3	1810074P20Rik	NP_080470.1	ILMN_1224227	006200035	S	2583	TTCATATAATCCGATGTGTAATTTTTTATGTAATAAAATTTCTTCAAAGA	4	-	25177379-25177428	4qA3	Mus musculus RIKEN cDNA 1810074P20 gene (1810074P20Rik), mRNA.				AI429228; mKIAA0776	AI429228; mKIAA0776
Mus musculus	RefSeq	ILMN_213616	ILMN_213616	1810074P20RIK	NM_026194.3	NM_026194.3		67490	142376271	NM_026194.3	1810074P20Rik	NP_080470.1	ILMN_1238246	002230452	S	2119	CGCACCTGGAAGGTGTGTCCCACAGATCATCGCGTTTCTTCACAGCAAAA	4	-	25178490-25178539	4qA3	Mus musculus RIKEN cDNA 1810074P20 gene (1810074P20Rik), mRNA.				AI429228; mKIAA0776	AI429228; mKIAA0776
Mus musculus	RefSeq	ILMN_220084	ILMN_220084	DSG4	NM_181564.2	NM_181564.2		16769	34328476	NM_181564.2	Dsg4	NP_853543.1	ILMN_1224038	003190433	S	2018	CGTCGGACTTGGCCCAGCAGGGATTGGCATGATTATTTTGGGGCTCTTGC	18	+	20621126-20621175	18qA2	Mus musculus desmoglein 4 (Dsg4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IMP]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDHF13; lah; MGC124398	CDHF13; lah; MGC124398
Mus musculus	RefSeq	ILMN_220084	ILMN_220084	DSG4	NM_181564.2	NM_181564.2		16769	34328476	NM_181564.2	Dsg4	NP_853543.1	ILMN_2889426	003290341	S	3031	CTGAGAGAGTGGTGGCTAGCCCTGGTATACCTGACATGGGCAACAGTAAC	18	+	20629875-20629924	18qA2	Mus musculus desmoglein 4 (Dsg4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IMP]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDHF13; lah; MGC124398	CDHF13; lah; MGC124398
Mus musculus	RefSeq	ILMN_220084	ILMN_220084	DSG4	NM_181564.2	NM_181564.2		16769	34328476	NM_181564.2	Dsg4	NP_853543.1	ILMN_1225281	003460707	S	3208	CGTCTCAACACCGAGTAACCAGATACAGCAATATGCACTACTCCCGACAG	18	+	20630052-20630101	18qA2	Mus musculus desmoglein 4 (Dsg4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IMP]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDHF13; lah; MGC124398	CDHF13; lah; MGC124398
Mus musculus	RefSeq	ILMN_196970	ILMN_196970	LOC380771	XM_354683.1	XM_354683.1			38050489	XM_354683.1	LOC380771		ILMN_2526437	005810717	S	154	CACACAGCTCTTCTTAAAATTGAAGTAACTCGGGCCCACGGAAACGGTGG										
Mus musculus	RefSeq	ILMN_209531	ILMN_209531	NDUFS2	NM_153064.4	NM_153064.4		226646	142376353	NM_153064.4	Ndufs2	NP_694704.1	ILMN_2704165	004180379	S	728	ACCTACCTCTTGGGCTTCTGGATGACATTTATGAGTTTTCCAAGAACTTC	1	-	173168672-173168721	1qH3	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 2 (Ndufs2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	MGC27667; AL033311	MGC27667; AL033311
Mus musculus	RefSeq	ILMN_209531	ILMN_209531	NDUFS2	NM_153064.4	NM_153064.4		226646	142376353	NM_153064.4	Ndufs2	NP_694704.1	ILMN_1224781	007330706	S	655	TTCGAGTTCTATGAGCGGGTGTCTGGGGCCCGGATGCACGCGGCGTATAT	1	-	173168862-173168911	1qH3	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 2 (Ndufs2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	MGC27667; AL033311	MGC27667; AL033311
Mus musculus	Riken	ILMN_205928	ILMN_205928	BCL10	ri|B230313B18|PX00159D13|AK080820|2358					AK080820	Bcl10		ILMN_1215785	004560475	S	2064	GCGTAGAGCAGATGGGTGAAACTGGTCTCTATCGGGGGCTGCGGAAAGCT						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence ISA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IMP]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence ISO]; A defense response that is mediated by cells [goid 6968] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISA]; Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50856] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus [goid 9620] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence NAS]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISA]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_223771	ILMN_225143	MINK1	NM_001045964.1	NM_001045964.1		50932	114052103	NM_001045964.1	Mink1	NP_001039429.1	ILMN_2768905	006270500	S	2329	GCAGAGCGGGGCACCCCCAAGCCTCCCGGGCCCCCAGCTCAGCCCCCTGG	11	+	70422134-70422183	11qB3	Mus musculus misshapen-like kinase 1 (zebrafish) (Mink1), transcript variant 4, mRNA.		The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10708748] [evidence IEP]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MINK; B55; RP23-122P1.6; Map4k6; Ysk2	MINK; B55; RP23-122P1.6; Map4k6; Ysk2
Mus musculus	Riken	ILMN_202947	ILMN_202947	A930014P08RIK	ri|A930014P08|PX00066C08|AK044473|1922					AK044473	A930014P08Rik		ILMN_1258114	003170095	S	1767	GCGCTGTCATGTAAGAAGCCTTGCACAGTCCCACTGCTCGACCAAGTCTT										
Mus musculus	RefSeq	ILMN_217938	ILMN_217938	ACBD4	NM_025988.2	NM_025988.2		67131	125628666	NM_025988.2	Acbd4	NP_080264.1	ILMN_3071515	005310114	I	657	AAGAGATGCTGCGATTCTACAGCTACTACAAGCAGGCTACCATGGGGCCC	11	+	102965235-102965284	11qE1	Mus musculus acyl-Coenzyme A binding domain containing 4 (Acbd4), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2010015A21Rik; 2010009P05Rik; AI849317	2010015A21Rik; 2010009P05Rik; AI849317
Mus musculus	RefSeq	ILMN_217938	ILMN_217938	ACBD4	NM_025988.2	NM_025988.2		67131	125628666	NM_025988.2	Acbd4	NP_080264.1	ILMN_3150296	007550445	A	1876	GGGACTTGGACCTGGCCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAGG	11	+	102973313-102973362	11qE1	Mus musculus acyl-Coenzyme A binding domain containing 4 (Acbd4), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2010015A21Rik; 2010009P05Rik; AI849317	2010015A21Rik; 2010009P05Rik; AI849317
Mus musculus	RefSeq	ILMN_217938	ILMN_217938	ACBD4	NM_025988.2	NM_025988.2		67131	125628666	NM_025988.2	Acbd4	NP_080264.1	ILMN_2689540	003180754	S	1891	CCTGAAGACTGATTGGCTGGAAGGTTGGTTGCAGGAAAGACCGGAGCCCC	11	+	102973328-102973377	11qE1	Mus musculus acyl-Coenzyme A binding domain containing 4 (Acbd4), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2010015A21Rik; 2010009P05Rik; AI849317	2010015A21Rik; 2010009P05Rik; AI849317
Mus musculus	RefSeq	ILMN_210080	ILMN_210080	C130074G19RIK	NM_178692.3	NM_178692.3		226777	121582461	NM_178692.3	C130074G19Rik	NP_848807.1	ILMN_1219466	005570053	S	2715	TCCAGCAGCAGGGCCCACACCCCACTGCAACCGAGTTTAAGAGCTTAGCT	1	-	186695893-186695942	1qH5	Mus musculus RIKEN cDNA C130074G19 gene (C130074G19Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_223588	ILMN_223588	4933417A18RIK	NM_025750.2	NM_025750.2		66761	118403291	NM_025750.2	4933417A18Rik	NP_080026.2	ILMN_2873321	006450162	S	643	GAGTGCATTTCAGTCCATGTCGGGAGGCTCAATGTTCCAGTGCTCATGGC	13	+	35036195-35036244	13qA3.3	Mus musculus RIKEN cDNA 4933417A18 gene (4933417A18Rik), mRNA.					
Mus musculus	MEEBO	ILMN_211207	ILMN_211207	2600011C06RIK	scl0070221.1_119	NM_027349.1			23956205	NM_027349.1	2600011C06Rik		ILMN_1231937	004920358	S	1933	CACTATTCCAATTAAAGGCTGAGTAAGCTTTCAAAGGGTATACAGTTGTG										
Mus musculus	MEEBO	ILMN_211207	ILMN_211207	2600011C06RIK	scl0070221.1_119	NM_027349.1			23956205	NM_027349.1	2600011C06Rik		ILMN_1220104	007150332	S	2082	CACAAGCTACTACTTCAGCATTTTAGGGGTTTGTCAGGCATTTCACTGCC										
Mus musculus	RefSeq	ILMN_214466	ILMN_214466	DPH4	NM_026992.1	NM_026992.1		99349	21729758	NM_026992.1	Dph4	NP_081268.1	ILMN_2839303	004120044	S	858	CTGTCTCCAAGGATGAAGCACAAGAAGCCACCCTCATCTCCTGTGACGCG	2	-	105767837-105767886	2qE3	Mus musculus DPH4 homolog (JJJ3, S. cerevisiae) (Dph4), mRNA.				Zcsl3; MmDjC7; AW240712; AV066965; 2610027M02Rik; 1700030A21Rik	Zcsl3; MmDjC7; AW240712; AV066965; 2610027M02Rik; 1700030A21Rik
Mus musculus	RefSeq	ILMN_214466	ILMN_214466	DPH4	NM_026992.1	NM_026992.1		99349	21729758	NM_026992.1	Dph4	NP_081268.1	ILMN_2839310	003800189	S	702	GGAATGAAGAAACCAAGAAAAAGTATGACCTGCAGCGGCATGAAGATGAG	2	-	105771346-105771355:105781821-105781860	2qE3	Mus musculus DPH4 homolog (JJJ3, S. cerevisiae) (Dph4), mRNA.				Zcsl3; MmDjC7; AW240712; AV066965; 2610027M02Rik; 1700030A21Rik	Zcsl3; MmDjC7; AW240712; AV066965; 2610027M02Rik; 1700030A21Rik
Mus musculus	MEEBO	ILMN_185277	ILMN_185277	USH3A	scl0229320.1_30	NM_153386.1			24415401	NM_153386.1	Ush3a		ILMN_2434673	000460280	S	18	GGCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCC										
Mus musculus	RefSeq	ILMN_218208	ILMN_218208	4833436C18RIK	NM_177377.3	NM_177377.3		329831	142383707	NM_177377.3	4833436C18Rik	NP_796351.1	ILMN_2692952	006040743	S	1249	GTGGGTCGGGGAGGGGCACAAAGAAAATGGCTTGGAGGCTGAGCACCTTT	4	-	43439941-43439990	4qA5	Mus musculus RIKEN cDNA 4833436C18 gene (4833436C18Rik), mRNA.					
Mus musculus	MEEBO	ILMN_218537	ILMN_218537	D330012F22RIK	scl0269952.2_132	NM_178752.2			31343406	NM_178752.2	D330012F22Rik		ILMN_1230998	007610181	S	715	CGACCTGGAGAAGTCCTTTTCCGGATGCAAAGGGAACCTAAAGGCCCAGC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212188	ILMN_212188	GCGR	NM_008101.1	NM_008101.1		14527	6679964	NM_008101.1	Gcgr	NP_032127.1	ILMN_2874278	004640152	S	1696	TGGCACAGGCCACAGTGACAGAGTAGGGGTTGGATATGATGGAGAAGCCA	11	+	120400155-120400204	11qE2	Mus musculus glucagon receptor (Gcgr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with glucagon to initiate a change in cell activity [goid 4967] [evidence IEA]	GR	GR
Mus musculus	RefSeq	ILMN_188907	ILMN_188907	UBASH3A	NM_177823.3	NM_177823.3		328795	142362428	NM_177823.3	Ubash3a	NP_808491.1	ILMN_2456730	006180326	S	2207	CTATAACCATCGCTCTTTAGGCAGGGCCATACCAGCTGAAAAGGGAGCAA	17	+	31378703-31378752	17qA3.3	Mus musculus ubiquitin associated and SH3 domain containing, A (Ubash3a), mRNA.		Any process that modulates the frequency, rate, or extent of production of a cytokine [goid 1817] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IGI]		Sts-2; C330001M22; 5830413C03Rik	Sts-2; C330001M22; 5830413C03Rik
Mus musculus	RefSeq	ILMN_197216	ILMN_197216	LOC381360	XM_355326.1	XM_355326.1			38074628	XM_355326.1	LOC381360		ILMN_2527328	004250068	S	13	GTTCAGAACCAGCCCATACCCATTACCTATGAGGAGTGTGTTTCACAGAC										
Mus musculus	RefSeq	ILMN_205718	ILMN_252644	CD300LG	NM_027987.2	NM_027987.2		52685	142376657	NM_027987.2	Cd300lg	NP_082263.1	ILMN_2574702	007380475	S	246	ATCAGGACCAGGAGGTGACTCGAGGCAGGATGTCCATCCGAGACAGTCCC	11	+	101904445-101904494	11qD	Mus musculus CD300 antigen like family member G (Cd300lg), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	D11Ertd736e; Clm9; 2310016B05Rik	D11Ertd736e; Clm9; 2310016B05Rik
Mus musculus	RefSeq	ILMN_217854	ILMN_252644	CD300LG	NM_027987.2	NM_027987.2		52685	142376657	NM_027987.2	Cd300lg	NP_082263.1	ILMN_2688416	006250040	S	2100	TAACCTCACCAAACCTTGTTGACGGCTCTGCCTGAGCTTGCAGGACCCCC	11	+	101916720-101916769	11qD	Mus musculus CD300 antigen like family member G (Cd300lg), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	D11Ertd736e; Clm9; 2310016B05Rik	D11Ertd736e; Clm9; 2310016B05Rik
Mus musculus	RefSeq	ILMN_196644	ILMN_310224	LOC100047645	XM_001478591.1	XM_001478591.1		100047645	149251820	XM_001478591.1	LOC100047645	XP_001478641.1	ILMN_1224858	002760070	S	885	GAGGAAAAGGTGTGGGGTCTGCGTGCCCTGCAAGAGGCTCATCAACTGTG					PREDICTED: Mus musculus similar to Dvl-binding protein Idax (LOC100047645), mRNA.					
Mus musculus	RefSeq	ILMN_217686	ILMN_217686	GNA12	NM_010302.2	NM_010302.2		14673	118129987	NM_010302.2	Gna12	NP_034432.1	ILMN_2686393	002120368	S	1581	GACACAGTTAACCAAGGTTCAGGTGTACGCAGACACACGCGTGCTCTCAT	5	-	141236147-141236196	5qG2	Mus musculus guanine nucleotide binding protein, alpha 12 (Gna12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	AI414047; Galpha12; AI504261; MGC130498	AI414047; Galpha12; AI504261; MGC130498
Mus musculus	RefSeq	ILMN_198914	ILMN_198914	LOC234911	XM_134619.3	XM_134619.3			38089707	XM_134619.3	LOC234911		ILMN_2533376	004070324	S	1251	GTGCTTCCCAGGAATTCGCCTCCGTGTGGATGCTGTCTTCCAACATAATG										
Mus musculus	RefSeq	ILMN_199881	ILMN_199881	LOC381539	XM_355508.1	XM_355508.1			38078641	XM_355508.1	LOC381539		ILMN_1213802	004070066	S	2538	GGAGGCATCACTGCAGAGCGTGTGGGAAGGTTTTCTGTGCTTCCTGCTGC										
Mus musculus	RefSeq	ILMN_206566	ILMN_219342	CD93	NM_010740.3	NM_010740.3		17064	144922670	NM_010740.3	Cd93	NP_034870.1	ILMN_1226329	005890255	S	5403	AGCGGGCTGCTTTCCTTCAGCTTCATACCCGGGGAAACCGAGTAAGCCTC	2	-	148263572-148263621	2qG3	Mus musculus CD93 antigen (Cd93), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISS]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	6030404G09Rik; C1qr1; AA145088; C1qrp; AW555904; AA4.1; Ly68	6030404G09Rik; C1qr1; AA145088; C1qrp; AW555904; AA4.1; Ly68
Mus musculus	RefSeq	ILMN_219342	ILMN_219342	CD93	NM_010740.3	NM_010740.3		17064	144922670	NM_010740.3	Cd93	NP_034870.1	ILMN_1226829	006060050	S	6322	CCTTTTGTCAGGGGTTATTGTAAATGTTAGTAATTTCGCCTCAAGCCCTC	2	-	148262653-148262702	2qG3	Mus musculus CD93 antigen (Cd93), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISS]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	6030404G09Rik; C1qr1; AA145088; C1qrp; AW555904; AA4.1; Ly68	6030404G09Rik; C1qr1; AA145088; C1qrp; AW555904; AA4.1; Ly68
Mus musculus	RefSeq	ILMN_218650	ILMN_218650	SOCS6	NM_018821.3	NM_018821.3		54607	141802820	NM_018821.3	Socs6	NP_061291.2	ILMN_1236610	002650544	S	2091	GGGATGCCTTTAGGGTTTAGAAGTGTGAGTTATCTTTCCTTAATGTGCAG	18	-	89038341-89038390	18qE4	Mus musculus suppressor of cytokine signaling 6 (Socs6), mRNA.		Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IMP]; A cellular homeostatic process involved in the maintenance of an internal equilibrium of glucose within a cell or between a cell and its external environment [goid 1678] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	STATI4; Cish4; SSI4; 1500012M23Rik; HSPC060; STAI4; SOCS-4; Cis4; Socs4; 5830401B18Rik; MGC102463; SOCS-6; AI447482	STATI4; Cish4; SSI4; 1500012M23Rik; HSPC060; STAI4; SOCS-4; Cis4; Socs4; 5830401B18Rik; MGC102463; SOCS-6; AI447482
Mus musculus	RefSeq	ILMN_218650	ILMN_218650	SOCS6	NM_018821.3	NM_018821.3		54607	141802820	NM_018821.3	Socs6	NP_061291.2	ILMN_2726898	002710274	S	2935	CTGTGTTTGACCATTCTAACTCTAAACCAACAACCTTGAATGACATCAGC	18	-	89037497-89037546	18qE4	Mus musculus suppressor of cytokine signaling 6 (Socs6), mRNA.		Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IMP]; A cellular homeostatic process involved in the maintenance of an internal equilibrium of glucose within a cell or between a cell and its external environment [goid 1678] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	STATI4; Cish4; SSI4; 1500012M23Rik; HSPC060; STAI4; SOCS-4; Cis4; Socs4; 5830401B18Rik; MGC102463; SOCS-6; AI447482	STATI4; Cish4; SSI4; 1500012M23Rik; HSPC060; STAI4; SOCS-4; Cis4; Socs4; 5830401B18Rik; MGC102463; SOCS-6; AI447482
Mus musculus	RefSeq	ILMN_198665	ILMN_198665	LOC245575	XM_142100.2	XM_142100.2			38086731	XM_142100.2	LOC245575		ILMN_2532489	004250685	S	158	CCGGTGATCAGTCAGAGGAACCAAGTTCTGTTGTTGAAGGTGTGGAGAAC										
Mus musculus	MEEBO	ILMN_222299	ILMN_222299	GPR126	scl38180.4.1_30	XM_136924.2			38090958	XM_136924.2	Gpr126		ILMN_2747634	005900255	S	3342	TCCAAATCAAAGTCCAGCTCCACTACCTATTTCAAAAGAAACAGCCACTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	Riken	ILMN_204766	ILMN_204766	B930044F18RIK	ri|B930044F18|PX00164M16|AK047267|1825					AK047267	B930044F18Rik		ILMN_1252846	007100242	S	585	GCTGAGCCATCTCACCAGCCCCTATTTGGCATCTTTATGTTCTACTGCCT										
Mus musculus	RefSeq	ILMN_209518	ILMN_242055	PHACTR1	NM_001005740.1	NM_001005740.1		218194	54144634	NM_001005740.1	Phactr1	NP_001005740.1	ILMN_2596560	006060086	S	5102	CCGCGCCCTCCCGGGTTCTAACTTAACAGATGACGGCCGTATGAAGAAGA	13	+	43233690-43233739	13qA4	Mus musculus phosphatase and actin regulator 1 (Phactr1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	Rpel1; 9630030F18Rik	Rpel1; 9630030F18Rik
Mus musculus	RefSeq	ILMN_209518	ILMN_242055	PHACTR1	NM_001005740.1	NM_001005740.1		218194	54144634	NM_001005740.1	Phactr1	NP_001005740.1	ILMN_2683499	006200554	S	796	ACCATGAGGAGACCCCAGTGAAACAGTTGTCCCTTCACAAGCAGCCCCCG	13	+	43155051-43155100	13qA4	Mus musculus phosphatase and actin regulator 1 (Phactr1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	Rpel1; 9630030F18Rik	Rpel1; 9630030F18Rik
Mus musculus	RefSeq	ILMN_210655	ILMN_210655	ARPP21	NM_028755.2	NM_028755.2		74100	27753996	NM_028755.2	Arpp21	NP_083031.1	ILMN_1240537	004210273	S	2124	GTCCCCCATGTTACTTGATCTCAGACCCACACCTGATGGTTCAGTCTGTC	9	-	112083678-112083727	9qF3	Mus musculus cyclic AMP-regulated phosphoprotein, 21 (Arpp21), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ARPP-21; 0710001E13Rik; D9Bwg1012e; AI853636; Tarpp	ARPP-21; 0710001E13Rik; D9Bwg1012e; AI853636; Tarpp
Mus musculus	RefSeq	ILMN_210655	ILMN_210655	ARPP21	NM_028755.2	NM_028755.2		74100	27753996	NM_028755.2	Arpp21	NP_083031.1	ILMN_2607858	006020673	S	2268	GTATAAACTTATCCTGTACCAATGTATTTATTAACACTTGTATTTTAATA	9	-	112083534-112083583	9qF3	Mus musculus cyclic AMP-regulated phosphoprotein, 21 (Arpp21), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ARPP-21; 0710001E13Rik; D9Bwg1012e; AI853636; Tarpp	ARPP-21; 0710001E13Rik; D9Bwg1012e; AI853636; Tarpp
Mus musculus	RefSeq	ILMN_214167	ILMN_232730	PSMA4	NM_011966.3	NM_011966.3		26441	118129984	NM_011966.3	Psma4	NP_036096.1	ILMN_2771944	006330017	S	614	GCGAAATGACTCTGAAGTCAGCGCTTGCTCTGGCTGTTAAGGTGCTAAAT	9	+	54804655-54804704	9qB	Mus musculus proteasome (prosome, macropain) subunit, alpha type 4 (Psma4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	C9	C9
Mus musculus	RefSeq	ILMN_225387	ILMN_225387	PROCR	NM_011171.1	NM_011171.1		19124	6755175	NM_011171.1	Procr	NP_035301.1	ILMN_2904658	003850333	S	1037	GTGGGTGCTTAATTGTGGAAATCAGACCATAGACTTGGGGGGAGGCTGGG	2	+	155580873-155580922	2qH1	Mus musculus protein C receptor, endothelial (Procr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of coagulation [goid 50819] [evidence TAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence ISS]	AI325044; Ccca; EPCR	AI325044; Ccca; EPCR
Mus musculus	RefSeq	ILMN_223534	ILMN_223534	LLGL1	NM_008502.1	NM_008502.1		16897	6678695	NM_008502.1	Llgl1	NP_032528.1	ILMN_2828427	002120110	S	4026	GCTCCTGGCCTGTGTGTATTGTGTGCTCCTGTGACTAGAGACTGCTGGGC	11	+	60527447-60527496	11qB2	Mus musculus lethal giant larvae homolog 1 (Drosophila) (Llgl1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence TAS]; Retaining the established polarization of a cell along its apical/basal axis [goid 35090] [evidence IMP]		Mgl1; Llglh; AI325176	Mgl1; Llglh; AI325176
Mus musculus	RefSeq	ILMN_223534	ILMN_223534	LLGL1	NM_008502.1	NM_008502.1		16897	6678695	NM_008502.1	Llgl1	NP_032528.1	ILMN_1247530	000770259	S	4140	GGATGGGCTTCCCTGTAGATGCCACCTTCGGCTTTTCTGTCTTTTTTTAA	11	+	60527561-60527610	11qB2	Mus musculus lethal giant larvae homolog 1 (Drosophila) (Llgl1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence TAS]; Retaining the established polarization of a cell along its apical/basal axis [goid 35090] [evidence IMP]		Mgl1; Llglh; AI325176	Mgl1; Llglh; AI325176
Mus musculus	RefSeq	ILMN_200542	ILMN_200542	LOC384344	XM_357591.1	XM_357591.1			38083501	XM_357591.1	LOC384344		ILMN_1235498	004610347	S	193	TCGGACATCTCGGTGTGGTTTTCTGTGGCTGTCCCTTCCTTATCTGACTC										
Mus musculus	RefSeq	ILMN_243556	ILMN_243556	TRUB2	NM_145520.2	NM_145520.2		227682	31560758	NM_145520.2	Trub2	NP_663495.2	ILMN_2983686	000580411	S	3093	GGTGTCTGCAGTGTGAACACTAACAGGCTGATGATTGTTGGTGTCTGCAG	2	-	29598384-29598433	2qB	Mus musculus TruB pseudouridine (psi) synthase homolog 2 (E. coli) (Trub2), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]	G430055L02Rik	G430055L02Rik
Mus musculus	RefSeq	ILMN_189824	ILMN_246989	SP2	NM_030220.3	NM_030220.3		78912	125625317	NM_030220.3	Sp2	NP_084496.2	ILMN_2464693	004250747	S	2500	GAACGTTGCCTTATACTCACTTCAGATGATGACACTGTGGACGTGTGTGC	11	-	96815137-96815186	11qD	Mus musculus Sp2 transcription factor (Sp2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	4930480I16Rik; mKIAA0048	4930480I16Rik; mKIAA0048
Mus musculus	RefSeq	ILMN_246989	ILMN_246989	SP2	NM_030220.3	NM_030220.3		78912	125625317	NM_030220.3	Sp2	NP_084496.2	ILMN_3097690	003140575	A	1873	CAAGACCCACCTAGGCACGAAGGGCTTGTAAGGCCAACTGAGGCAGGAGG	11	-	96815764-96815783:96815784-96815813	11qD	Mus musculus Sp2 transcription factor (Sp2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	4930480I16Rik; mKIAA0048	4930480I16Rik; mKIAA0048
Mus musculus	RefSeq	ILMN_189824	ILMN_246989	SP2	NM_030220.3	NM_030220.3		78912	125625317	NM_030220.3	Sp2	NP_084496.2	ILMN_2607612	005220368	S	1765	GAGCGATGAACTCCAGCGACATGCTCGAACCCACACAGGGGACAAGCGCT	11	-	96815872-96815884:96817089-96817125	11qD	Mus musculus Sp2 transcription factor (Sp2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	4930480I16Rik; mKIAA0048	4930480I16Rik; mKIAA0048
Mus musculus	RefSeq	ILMN_218898	ILMN_218898	LIG4	NM_176953.3	NM_176953.3		319583	84794636	NM_176953.3	Lig4	NP_795927.2	ILMN_2701654	003840411	S	2887	CTTATCTGAAGGGGTATCTCATGTTATCATTGGGGAGGATCAGAGACGAG	8	-	9971164-9971213	8qA1.1	Mus musculus ligase IV, DNA, ATP-dependent (Lig4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IDA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence ISO]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50769] [evidence IMP]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IGI]; The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, as occurs during DNA recombination [goid 51102] [evidence IMP]; The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, as occurs during DNA repair [goid 51103] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a pro-B cell. Pro-B cells are the earliest stage of the B cell lineage and undergo heavy chain D and J gene rearrangements, although they are not fully committed [goid 2328] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a pro-B cell. Pro-B cells are the earliest stage of the B cell lineage and undergo heavy chain D and J gene rearrangements, although they are not fully committed [goid 2328] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50769] [evidence IMP]; The process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33153] [evidence IMP]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IMP]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IGI]; The process by which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33151] [evidence IDA]; The process by which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33151] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase [goid 6266] [evidence IDA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IGI]; The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase [goid 6266] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m) [goid 3910] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	tiny; 5830471N16Rik	tiny; 5830471N16Rik
Mus musculus	RefSeq	ILMN_195329	ILMN_232452	MLL3	NM_001081383.1	NM_001081383.1		231051	124487062	NM_001081383.1	Mll3	NP_001074852.1	ILMN_2514607	000270356	S	2256	GCATCTAAAGAACTAAGCCCTCCAAAATCAGCTCCTGAGACTGCTGCACC	5	-	24879025-24879074	5qA3	Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3 (Mll3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	E330008K23Rik; mKIAA1506; KIAA1506	E330008K23Rik; mKIAA1506; KIAA1506
Mus musculus	RefSeq	ILMN_209742	ILMN_232452	MLL3	NM_001081383.1	NM_001081383.1		231051	124487062	NM_001081383.1	Mll3	NP_001074852.1	ILMN_2598778	003310300	S	10406	TTTTCAAGAGCGAGAGAGGAAGGAACGCTTACGAGAACAGCAGGAAAGAC	5	-	24805904-24805953	5qA3	Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3 (Mll3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	E330008K23Rik; mKIAA1506; KIAA1506	E330008K23Rik; mKIAA1506; KIAA1506
Mus musculus	RefSeq	ILMN_209742	ILMN_232452	MLL3	NM_001081383.1	NM_001081383.1		231051	124487062	NM_001081383.1	Mll3	NP_001074852.1	ILMN_2700571	006900162	S	15034	TTTTTGTTTTCTGACTTTTTAAGAAACAGCTTCTGGGAGCTCTGATTCCT	5	-	24779348-24779397	5qA3	Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3 (Mll3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	E330008K23Rik; mKIAA1506; KIAA1506	E330008K23Rik; mKIAA1506; KIAA1506
Mus musculus	RefSeq	ILMN_209742	ILMN_232452	MLL3	NM_001081383.1	NM_001081383.1		231051	124487062	NM_001081383.1	Mll3	NP_001074852.1	ILMN_2700430	001470692	S	16123	GTAAACATAGAGTCATGTAGCAGGGACCTAACCCAACTCCTTAGCCTTCT	5	-	24778259-24778308	5qA3	Mus musculus myeloid/lymphoid or mixed-lineage leukemia 3 (Mll3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	E330008K23Rik; mKIAA1506; KIAA1506	E330008K23Rik; mKIAA1506; KIAA1506
Mus musculus	RefSeq	ILMN_197429	ILMN_197429	LOC333765	XM_289882.2	XM_289882.2			38075721	XM_289882.2	LOC333765		ILMN_1228151	003840301	S	602	GAAGTGGTTGTACAAGCTTGCAATCCCACCAACAGTGGAGGACTGTTCCT										
Mus musculus	MEEBO	ILMN_192573	ILMN_192573	PPAP2C	scl37761.6_244				7657470	NM_015817	Ppap2c		ILMN_1216282	007000040	S	813	ACGGTGAGTCCTACTTGCCTGACCCACAGGCTCTGCTTTGGCTGACTCCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence ISS]		
Mus musculus	RefSeq	ILMN_200034	ILMN_200034	LOC383153	XM_356899.1	XM_356899.1			38079953	XM_356899.1	LOC383153		ILMN_2537361	000430370	S	231	CGAGCTCCTGCGCTACTCCGAGAGGACTTTATTTTACAAAGAAGTATCCC										
Mus musculus	RefSeq	ILMN_243083	ILMN_243083	BRSK2	NM_001009930.2	NM_001009930.2		75770	118131128	NM_001009930.2	Brsk2	NP_001009930.1	ILMN_3033823	001510731	I	1961	AAGTGATGACGGGGCGGCTTTCCAAATGTGACGAGAAGAACGGGCAGGCG	7	+	149186765-149186794:149187968-149187987	7qF5	Mus musculus BR serine/threonine kinase 2 (Brsk2), transcript variant 3, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; The specification and formation of anisotropic intracellular organization or cell growth patterns [goid 30010] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IC ]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IC ]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	SAD-A; SADA; 4833424K13Rik	SAD-A; SADA; 4833424K13Rik
Mus musculus	MEEBO	ILMN_209234	ILMN_209234	PPAPDC1	scl33962.6.1_87	XM_134059.2			23599871	XM_134059.2	Ppapdc1		ILMN_2593859	000730521	S	833	ACCTCAGTGGAGAACAAGCAGATCAACCCTCCTAACTGGACAGGACGCAC										
Mus musculus	Riken	ILMN_204982	ILMN_204982	C530005A01RIK	ri|C530005A01|PX00080N13|AK049617|2556					AK049617	C530005A01Rik		ILMN_1246794	005910615	S	2362	GGATTAGTGGTCATTCCGCTCAACGACTGGAGGAACTGGTTAGGATCGGC										
Mus musculus	RefSeq	ILMN_231704	ILMN_231704	OLFR124	NM_147062.1	NM_147062.1		259064	22128830	NM_147062.1	Olfr124	NP_667273.1	ILMN_2822080	004610168	S	459	TGCAAACTCTCTTGTGCAGTCCACCCTCACTGTGGTAGCCCCCAGGTGTG	17	+	37942550-37942599	17qB1	Mus musculus olfactory receptor 124 (Olfr124), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-3	MOR256-3
Mus musculus	RefSeq	ILMN_200703	ILMN_200703	LOC386468	XM_359301.1	XM_359301.1			38085314	XM_359301.1	LOC386468		ILMN_2539706	002140471	S	356	GCAAGCTAGAGTCCCTGGATGGGGAGGAGCTGATGAAGATCAAGGACAAC										
Mus musculus	RefSeq	ILMN_196348	ILMN_196348	AL022832	NM_013916.1	NM_013916.1			7305130	NM_013916.1	AL022832		ILMN_2523777	006860181	S	3301	ACACCCTTCTCCGGTATCTGATCCAGCAAACTTGGTTGGGAAACCCTGTG										
Mus musculus	MEEBO	ILMN_188963	ILMN_188963	POLE3	scl24260.3_379				31981173	NM_021498	Pole3		ILMN_1254553	000780228	S	11	CCTGCCTTCTAAAGAGAGTTGAGAACACCTCTGAACCTTACGGTAAGAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210534	ILMN_210534	CD36	NM_007643.3	NM_007643.3		12491	142363407	NM_007643.3	Cd36	NP_031669.2	ILMN_1232470	002750035	S	2468	CAGCTGCAACTAATAACAACCTTGGAGAGCTGTTATAGTGTTAAAAGATG	5	-	17288332-17288381	5qA3	Mus musculus CD36 antigen (Cd36), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte [goid 43277] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence IDA]	GPIV; Scarb3; FAT	GPIV; Scarb3; FAT
Mus musculus	MEEBO	ILMN_190103	ILMN_190103	BAMBI-PS1	scl18744.1.2_117						Bambi-ps1		ILMN_2467190	007650431	S	6	GCTGGCGGACTGATCTTGTGCTGCTGCCTTACTGTTTTGTTGGCCTTGCG										
Mus musculus	RefSeq	ILMN_220741	ILMN_220741	OLFR870	NM_146904.1	NM_146904.1		57251	22380660	NM_146904.1	Olfr870	NP_667115.1	ILMN_2726139	000510022	S	544	GCCAAAGCCCTCACTATAGCCTGCTCAGATACACTAATCAATCATATCCT	9	-	19975420-19975469	9qA3	Mus musculus olfactory receptor 870 (Olfr870), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR141-1; Olfr72	MOR141-1; Olfr72
Mus musculus	MEEBO	ILMN_217089	ILMN_217089	PYGO1	scl36720.3_483	XM_134865.1			20890809	XM_134865.1	Pygo1		ILMN_2678967	006250615	S	1500	GGGCGGCGATGCCTAAGTACGGCTGTCGGCTAACGTGGGTTCATTGTTCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_249430	ILMN_249430	ABCC5	NM_176839.1	NM_176839.1		27416	66932955	NM_176839.1	Abcc5	NP_789809.1	ILMN_3048492	007560475	I	1038	GGCTATCCCCGTTCGGCTCTGTATGTTCCCACCAAATGTTCCTGATGCCC	16	-	20400922-20400971	16qA3	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 5 (Abcc5), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	MGC116567; Abcc5a; AI132311; Abcc5b; 2900011L11Rik; Mrp5	MGC116567; Abcc5a; AI132311; Abcc5b; 2900011L11Rik; Mrp5
Mus musculus	RefSeq	ILMN_219227	ILMN_219227	FBXO18	NM_015792.1	NM_015792.1		50755	21703349	NM_015792.1	Fbxo18	NP_056607.1	ILMN_1213458	003120156	S	16	TTGCTGGTCGGGGAAAGGCTGAATGTCCGGCGGCATCGCCTGGGTGGTGT	2	-	11699089-11699138	2qA1	Mus musculus F-box protein 18 (Fbxo18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]	AU015756; Fbx18	AU015756; Fbx18
Mus musculus	RefSeq	ILMN_219227	ILMN_219227	FBXO18	NM_015792.1	NM_015792.1		50755	21703349	NM_015792.1	Fbxo18	NP_056607.1	ILMN_2710538	002710224	S	3216	GTCTTCTGAGGCTGTGACTCCACGTGCTAAAGGAGCCATTCTGGGCTGCA	2	-	11664448-11664489:11664490-11664497	2qA1	Mus musculus F-box protein 18 (Fbxo18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]	AU015756; Fbx18	AU015756; Fbx18
Mus musculus	RefSeq	ILMN_219227	ILMN_219227	FBXO18	NM_015792.1	NM_015792.1		50755	21703349	NM_015792.1	Fbxo18	NP_056607.1	ILMN_2811705	001690053	S	3463	CAAGGTTTCAATTAAACAGGTATTGAGCAGTGGCGTGCCACTGTGAAGTC	2	-	11664201-11664250	2qA1	Mus musculus F-box protein 18 (Fbxo18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]	AU015756; Fbx18	AU015756; Fbx18
Mus musculus	MEEBO	ILMN_186315	ILMN_186315	D9WSU20E	scl35561.7_23				31981565	NM_133718	D9Wsu20e		ILMN_2434490	000780021	S	2	CCCTCTGCATGGAAGCACTGCCTGAGGCCTAGTATGGGCTCTTTACGTTC										
Mus musculus	RefSeq	ILMN_184932	ILMN_329271	LOC100046467	XM_001476251.1	XM_001476251.1		100046467	149272110	XM_001476251.1	LOC100046467	XP_001476301.1	ILMN_1228202	007510093	S	2105	CCAGCAAACAACCTGAGGAGCAGGCAGATAATTCTGAACACAGCACAGTG					PREDICTED: Mus musculus hypothetical protein LOC100046467 (LOC100046467), mRNA.					
Mus musculus	Riken	ILMN_206007	ILMN_206007	CDGAP	ri|B130047P03|PX00158E22|AK045213|2958					AK045213	Cdgap		ILMN_1223046	002450204	S	2815	GACGTCAAACATAAACTGGAGCTGGTAGTTCAGGCCCATGAGCCCAGCAC						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IDA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222462	ILMN_222462	ADAMTS19	NM_175506.3	NM_175506.3		240322	118130275	NM_175506.3	Adamts19	NP_780715.1	ILMN_1227352	004730458	S	4463	CCACCCAGATCTTTCCATCCCCTAGCAGTCTTATGAAAGAGGATCGTACT	18	+	59213129-59213178	18qD3	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19 (Adamts19), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	4831407I23Rik; AU015154; D230034E10Rik	4831407I23Rik; AU015154; D230034E10Rik
Mus musculus	Riken	ILMN_205466	ILMN_205466	A630054M16RIK	ri|A630054M16|PX00146M06|AK042052|3475					AK042052	A630054M16Rik		ILMN_1218533	002140458	S	3283	GCAAGCCCATGCTGGATGACGGCTCAGTTAGTGCTTTGGCTGTTGTTAGG										
Mus musculus	RefSeq	ILMN_193545	ILMN_257422	PPIG	NM_001081086.1	NM_001081086.1		228005	124487332	NM_001081086.1	Ppig	NP_001074555.1	ILMN_1228692	001190736	S	3234	TGTCCACGTTGCTCTGCGAGCTATAAAAATGAGGTGAGTGCTGTTTTCAG	2	+	69589053-69589102	2qC2	Mus musculus peptidyl-prolyl isomerase G (cyclophilin G) (Ppig), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	AU019516; CYP; SRCyp; AU022200; B230312B02Rik	AU019516; CYP; SRCyp; AU022200; B230312B02Rik
Mus musculus	RefSeq	ILMN_193545	ILMN_257422	PPIG	NM_001081086.1	NM_001081086.1		228005	124487332	NM_001081086.1	Ppig	NP_001074555.1	ILMN_1232734	004900739	S	5317	CTAGTGACTACTTAGAGCAGTTAGTATAATTGATCCTTTGTTCCATGTGT	2	+	69591136-69591185	2qC2	Mus musculus peptidyl-prolyl isomerase G (cyclophilin G) (Ppig), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	AU019516; CYP; SRCyp; AU022200; B230312B02Rik	AU019516; CYP; SRCyp; AU022200; B230312B02Rik
Mus musculus	RefSeq	ILMN_202660	ILMN_310069	LOC100038830	XM_001471766.1	XM_001471766.1		100038830	149260623	XM_001471766.1	LOC100038830	XP_001471816.1	ILMN_1233815	007570037	S	1089	GATCTGCAGTCCTCAGCACCACCTCTGTTGGATGACTCTTTGACAGTGCC	10	+	21973612-21973661	10qA3	PREDICTED: Mus musculus hypothetical protein LOC100038830 (LOC100038830), mRNA.					
Mus musculus	RefSeq	ILMN_201512	ILMN_201512	RPL9	NM_011292.1	NM_011292.1		20005	14149646	NM_011292.1	Rpl9	NP_035422.1	ILMN_2851231	006380161	S	273	GGGTGTCACGCTGGGCTTCCGATACAAGATGCGGTCTGTGTACGCTCACT	5	-	65780786-65780835	5qC3.1	Mus musculus ribosomal protein L9 (Rpl9), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IC ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IC ]	MGC102393	MGC102393
Mus musculus	RefSeq	ILMN_214430	ILMN_214430	C330027C09RIK	NM_172616.2	NM_172616.2		224171	125858490	NM_172616.2	C330027C09Rik	NP_766204.2	ILMN_2709155	002230170	S	3750	AAAATGTTGTATGTTGAAAAACCTATCATCGCTTTCAAGAGTAATTGGAT	16	+	49019594-49019643	16qB5	Mus musculus RIKEN cDNA C330027C09 gene (C330027C09Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU018569; AA408511	AU018569; AA408511
Mus musculus	RefSeq	ILMN_214430	ILMN_214430	C330027C09RIK	NM_172616.2	NM_172616.2		224171	125858490	NM_172616.2	C330027C09Rik	NP_766204.2	ILMN_2647961	003180646	S	2440	GAGAAAGAAGAGCAGAGAAAAGAAGTCCAGAGCCAGTTAGCAGACCGAGA	16	+	49016411-49016460	16qB5	Mus musculus RIKEN cDNA C330027C09 gene (C330027C09Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU018569; AA408511	AU018569; AA408511
Mus musculus	MEEBO	ILMN_195342	ILMN_195342	1110067B18RIK	scl27815.1.1_229						1110067B18Rik		ILMN_2514723	002030072	S	4	CTCGTCATAACCCTTTGTGGTGGCTGTTAGCTGGATAACATGTAGGCAGG										
Mus musculus	Riken	ILMN_207078	ILMN_207078	B930085B11RIK	ri|B930085B11|PX00665F03|AK081092|1703					AK081092	B930085B11Rik		ILMN_1235636	000060008	S	1627	GCATGCCTGCGAACGTCACTCAGGAGGCTGAAGGTTTCGGCTCAAGTCCA										
Mus musculus	RefSeq	ILMN_214482	ILMN_214482	OLFR1189	NM_146772.2	NM_146772.2		258768	110735419	NM_146772.2	Olfr1189	NP_666983.2	ILMN_1242368	006650068	S	647	ACATGGTCATTCTCTGCTCCCTTAAGTCTTATAGTTCTGAAGGGAGACGC	2	+	88432609-88432658	2qD	Mus musculus olfactory receptor 1189 (Olfr1189), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR237-2	MOR237-2
Mus musculus	RefSeq	ILMN_200427	ILMN_312043	GM1684	XM_001477316.1	XM_001477316.1		381709	149254349	XM_001477316.1	Gm1684	XP_001477366.1	ILMN_1246747	002450561	S	272	ATGTTTTCAGCTCTCCCAAGACACCGCCCGGGGACAGTCATTCTGCCTGG				5qF	PREDICTED: Mus musculus gene model 1684, (NCBI) (Gm1684), mRNA.					
Mus musculus	RefSeq	ILMN_209835	ILMN_209835	AP4M1	NM_021392.3	NM_021392.3		11781	141803389	NM_021392.3	Ap4m1	NP_067367.2	ILMN_2692762	002810382	S	467	GGGAACCATCTCACGCAATGTGGCGCTTGTCTACGAACTCCTGGATGAAG	5	+	138614242-138614291	5qG2	Mus musculus adaptor-related protein complex AP-4, mu 1 (Ap4m1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ap4m4; 4930443L05Rik	Ap4m4; 4930443L05Rik
Mus musculus	RefSeq	ILMN_209835	ILMN_209835	AP4M1	NM_021392.3	NM_021392.3		11781	141803389	NM_021392.3	Ap4m1	NP_067367.2	ILMN_2599667	004900132	S	1489	GCCACAGCAACGCCTACGTAATTCGGATTTGAAGCTCCCCAAGCAAGGAT	5	+	138619686-138619717:138619718-138619735	5qG2	Mus musculus adaptor-related protein complex AP-4, mu 1 (Ap4m1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ap4m4; 4930443L05Rik	Ap4m4; 4930443L05Rik
Mus musculus	RefSeq	ILMN_196820	ILMN_311775	LOC100046500	XR_032943.1	XR_032943.1		100046500	149261590	XR_032943.1	LOC100046500		ILMN_1248006	004610397	S	620	CAATGCTGACTTCATAGTGCCTGTAGAGATTGAGGGGACCACGCACCAGG					PREDICTED: Mus musculus similar to Ctdsp2 protein (LOC100046500), misc RNA.					
Mus musculus	RefSeq	ILMN_246788	ILMN_246788	OLFR242	NM_010974.1	NM_010974.1		406175	33468914	NM_010974.1	Olfr242	NP_035104.1	ILMN_2984862	004880059	S	680	GCATTCACTCCAGTGAGGGCAAGTTCAAGGCTTTTAGTACTTGCAGTTCC	9	+	38895352-38895401		Mus musculus olfactory receptor 242 (Olfr242), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_214796	ILMN_214796	HIST3H2BA	NM_030082.2	NM_030082.2		78303	142347259	NM_030082.2	Hist3h2ba	NP_084358.1	ILMN_2652022	004570056	S	483	TACCTGAATAAGATTGTCATTCACTTGATGAACATTGGGATGGGCCGGGG	11	+	58762895-58762944	11qB1.3	Mus musculus histone cluster 3, H2ba (Hist3h2ba), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI413321; 1500011O09Rik	AI413321; 1500011O09Rik
Mus musculus	RefSeq	ILMN_185958	ILMN_185958	UGT1A2	NM_013701.3	NM_013701.3		22236	145699117	NM_013701.3	Ugt1a2	NP_038729.1	ILMN_1252548	001190398	S	300	ATACTGAGCGACATTGAGAAGACCTTTAAAACACAACATTTTGTGAAGGC				1qD	Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A2 (Ugt1a2), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213934	ILMN_327968	LOC100045241	XM_001473918.1	XM_001473918.1		100045241	149275025	XM_001473918.1	LOC100045241	XP_001473968.1	ILMN_2642444	004640689	S	1893	CGGCTCCAAGGAGAACGTGCAAGAGACACAAATCTAAACCCAGGCGCACG					PREDICTED: Mus musculus similar to Leucine rich repeat containing 4B (LOC100045241), mRNA.					
Mus musculus	RefSeq	ILMN_212957	ILMN_212957	ASB11	NM_026853.1	NM_026853.1		68854	17105325	NM_026853.1	Asb11	NP_081129.1	ILMN_2632028	006380168	S	1175	CCATTTCCTGGTGCTAGGGTCAGCATTATGAATACTGATTAAACACAGGC	X	+	160896945-160896994	XqF5	Mus musculus ankyrin repeat and SOCS box-containing 11 (Asb11), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		1110067L12Rik; 1600009D24Rik	1110067L12Rik; 1600009D24Rik
Mus musculus	RefSeq	ILMN_217743	ILMN_217743	FBXO31	NM_133765.2	NM_133765.2		76454	31981580	NM_133765.2	Fbxo31	NP_598526.2	ILMN_2687032	000650020	S	1611	ATGCACTTTAGAAATGAACGCACACCTCCTCACTGGGGTCCCGGTCGCCC	8	-	124076022-124076071	8qE1	Mus musculus F-box protein 31 (Fbxo31), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2310046N15Rik; Fbxo14; Fbx14	2310046N15Rik; Fbxo14; Fbx14
Mus musculus	RefSeq	ILMN_217743	ILMN_217743	FBXO31	NM_133765.2	NM_133765.2		76454	31981580	NM_133765.2	Fbxo31	NP_598526.2	ILMN_1252057	002190349	S	1386	GCGCACCCCCGGAGTCTTCGTCCTGTTTGATGAGGACCGCTTTGGATTTC	8	-	124076247-124076296	8qE1	Mus musculus F-box protein 31 (Fbxo31), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2310046N15Rik; Fbxo14; Fbx14	2310046N15Rik; Fbxo14; Fbx14
Mus musculus	RefSeq	ILMN_196695	ILMN_229053	LOC669950	XR_002729.1	XR_002729.1		669950	94412273	XR_002729.1	LOC669950		ILMN_1220901	006220136	S	93	CCTCCAACCCAGAGAGGTTTGATCCTAGTCACTTTCTGGATGAGAGTGGC					PREDICTED: Mus musculus similar to cytochrome P450, family 2, subfamily c, polypeptide 66 (LOC669950), mRNA.					
Mus musculus	RefSeq	ILMN_214868	ILMN_214868	FCER2A	NM_013517.3	NM_013517.3		14128	146134514	NM_013517.3	Fcer2a	NP_038545.1	ILMN_2652877	006520630	S	1081	GGTGTGTGAGCAGCTGGCAACATGTGAGATATCTGCCCCCTTAGCCTCTG				8qA1.1	Mus musculus Fc receptor, IgE, low affinity II, alpha polypeptide (Fcer2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2925] [evidence IMP]	Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ly-42; Fce2; CD23	Ly-42; Fce2; CD23
Mus musculus	MEEBO	ILMN_220257	ILMN_220257	A730098D12RIK	scl0231386.4_56	NM_177680.2			31343311	NM_177680.2	A730098D12Rik		ILMN_1229688	005360202	S	1462	ATGGAAGTATGATGGTTTGACTATATGGCAGTGTTGTAGCAGCCTCTCGG										
Mus musculus	RefSeq	ILMN_185161	ILMN_225929	RFC2	NM_020022.2	NM_020022.2		19718	50263039	NM_020022.2	Rfc2	NP_064406.1	ILMN_2424690	001580278	S	447	AATGTTCGCCCAGCAGAAAGTCACCCTTCCCAAGGGCCGGCACAAGATCA	5	+	135058739-135058756:135058883-135058914	5qG2	Mus musculus replication factor C (activator 1) 2 (Rfc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]	MGC117486; Recc2; 40kDa; AI326953; 2610008M13Rik	MGC117486; Recc2; 40kDa; AI326953; 2610008M13Rik
Mus musculus	RefSeq	ILMN_221395	ILMN_225929	RFC2	NM_020022.2	NM_020022.2		19718	50263039	NM_020022.2	Rfc2	NP_064406.1	ILMN_2749487	001660301	S	1164	CACTGATGGAACTAGGAGAGTCTTTGTTGTGGGAGATGTGCCTCAGCTAG	5	+	135064418-135064467	5qG2	Mus musculus replication factor C (activator 1) 2 (Rfc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]	MGC117486; Recc2; 40kDa; AI326953; 2610008M13Rik	MGC117486; Recc2; 40kDa; AI326953; 2610008M13Rik
Mus musculus	RefSeq	ILMN_225929	ILMN_225929	RFC2	NM_020022.2	NM_020022.2		19718	50263039	NM_020022.2	Rfc2	NP_064406.1	ILMN_2894497	002570246	S	1441	TTCAAGCCCTGGACATGGGGCATGCTGGGAAAGCTCTGACCTCCTCAGTC	5	+	135065270-135065319	5qG2	Mus musculus replication factor C (activator 1) 2 (Rfc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]	MGC117486; Recc2; 40kDa; AI326953; 2610008M13Rik	MGC117486; Recc2; 40kDa; AI326953; 2610008M13Rik
Mus musculus	RefSeq	ILMN_213507	ILMN_213507	HLX	NM_008250.1	NM_008250.1		15284	6680224	NM_008250.1	Hlx	NP_032276.1	ILMN_2637757	004180181	S	1901	CTGGACCGAGGGCATAGCGTGCAGCTTCCTCTACACTGGCTGGACTTTGT	1	-	186551335-186551384	1qH5	Mus musculus H2.0-like homeobox (Hlx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The process by which the anatomical structures of the gut are generated and organized during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48558] [evidence IMP]; Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48513] [evidence IMP]; The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation [goid 48484] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell differentiation [goid 45629] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell differentiation [goid 45629] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of T-helper 1 cell differentiation [goid 45627] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of T-helper 1 cell differentiation [goid 45627] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hlx1; Hlx	Hlx1; Hlx
Mus musculus	MEEBO	ILMN_196289	ILMN_196289	STX17	scl25453.10.45_21				21312805	NM_026343	Stx17		ILMN_2730535	004390477	S	2179	CAGCAGCCAGAGCACAGGGTCAGGGGCCGAAGGGTTACCTCTTAGCTTCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the smooth endoplasmic reticulum [goid 30868] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]		
Mus musculus	MEEBO	ILMN_196289	ILMN_196289	STX17	scl25453.10.45_21				21312805	NM_026343	Stx17		ILMN_2730532	003130014	S	2181	GCAGCCAGAGCACAGGGTCAGGGGCCGAAGGGTTACCTCTTAGCTTCTTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the smooth endoplasmic reticulum [goid 30868] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]		
Mus musculus	Riken	ILMN_202854	ILMN_202854	3732404C04RIK	ri|3732404C04|PX00010O10|AK028333|2239					AK028333	3732404C04Rik		ILMN_2552812	003190296	S	2036	GTATACACTGCCGAAGTTCTAATTAATGAGCCATACAAACTGAATGAGCC										
Mus musculus	Riken	ILMN_206430	ILMN_206430	C230066G19RIK	ri|C230066G19|PX00175D06|AK082581|1439					AK082581	C230066G19Rik		ILMN_2580022	006380360	S	1252	TTTGCAAGGGCTCAGCCGTAGACAGATGAGAGGACAGGTCTGGCTGCTAG										
Mus musculus	RefSeq	ILMN_210106	ILMN_210106	ATP6V0E2	NM_133764.2	NM_133764.2		76252	50659089	NM_133764.2	Atp6v0e2	NP_598525.1	ILMN_2832658	001010703	S	1398	GAGAGGGTGAGTAGGGCATTCTTGCCTGTGTTGCCAGGGCTTGCTAGGAC	6	+	48491409-48491458	6qB2.3	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit E2 (Atp6v0e2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	NM9.2; 0610006O14Rik	NM9.2; 0610006O14Rik
Mus musculus	RefSeq	ILMN_201156	ILMN_243313	LOC677337	XM_001002557.1	XM_001002557.1		677337	94384456	XM_001002557.1	LOC677337	XP_001002557.1	ILMN_1255157	005310553	S	514	CTCACGCAGCTGTGCTTCTCATGCAGCTGTGCCTCTCATGCAGCTACACC					PREDICTED: Mus musculus hypothetical protein LOC677337 (LOC677337), mRNA.					
Mus musculus	RefSeq	ILMN_191354	ILMN_243583	FBXL18	NM_001033312.3	NM_001033312.3		231863	153945829	NM_001033312.3	Fbxl18	NP_001028484.2	ILMN_2643951	007210066	S	2462	TGACAAGAAGTAATCTGGTGAGCCATGGACGAATGGGCCGTGGATGAGCC				5qG2	Mus musculus F-box and leucine-rich repeat protein 18 (Fbxl18), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C330021B20Rik	C330021B20Rik
Mus musculus	RefSeq	ILMN_214784	ILMN_214784	HIRA	NM_010435.2	NM_010435.2		15260	52426777	NM_010435.2	Hira	NP_034565.2	ILMN_2651880	007610661	S	2336	AAGGACAGTATGAATGCTACCTCTACTCCTGCTGCATCGTCACCCTCTGT	16	+	18899530-18899550:18900834-18900862	16qA3	Mus musculus histone cell cycle regulation defective homolog A (S. cerevisiae) (Hira), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tuple1; N28177; AA138857; D16Ertd95e	Tuple1; N28177; AA138857; D16Ertd95e
Mus musculus	RefSeq	ILMN_222494	ILMN_222494	C230052I12RIK	NM_178643.5	NM_178643.5		101831	146198692	NM_178643.5	C230052I12Rik	NP_848758.1	ILMN_1216046	000010292	S	1064	GCAAATCCACACCTTCTTCACCCAGCCTAAGCGACAGCAGCCCCGCAGCT				7qB2	Mus musculus RIKEN cDNA C230052I12 gene (C230052I12Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AW538696; AW124591	AW538696; AW124591
Mus musculus	RefSeq	ILMN_194878	ILMN_227280	KCNN1	NM_032397.1	NM_032397.1		84036	14161695	NM_032397.1	Kcnn1	NP_115773.1	ILMN_2664556	004290440	S	2741	GAAACATGGACCCATCCTGCCCCTTCTGAGCCCAGTGTTAGCTCCTGTCC	8	-	73367230-73367279	8qB3.3	Mus musculus potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 (Kcnn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 16286] [evidence ISO]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	MGC115869; SK1; AI854248	MGC115869; SK1; AI854248
Mus musculus	RefSeq	ILMN_212503	ILMN_212503	GALNT10	NM_134189.2	NM_134189.2		171212	46877106	NM_134189.2	Galnt10	NP_598950.2	ILMN_2878781	001440022	S	4496	AGATCTTAACGCGGTCCACTCAGCTCTGACAGGGAGTCCAGGGGCTGCAG	11	+	57600797-57600846	11qB1.3	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (Galnt10), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C330012K04Rik; ppGaNTase; GalNAc-T10; AU018154; Galnt9; GalNAc-T9	C330012K04Rik; ppGaNTase; GalNAc-T10; AU018154; Galnt9; GalNAc-T9
Mus musculus	RefSeq	ILMN_212503	ILMN_212503	GALNT10	NM_134189.2	NM_134189.2		171212	46877106	NM_134189.2	Galnt10	NP_598950.2	ILMN_2750011	006400463	S	3180	TGCGTGTTGCAGCCAAGGGGAGTTGAGTCCTCAGAGAGCAATGCGGCCTT	11	+	57599481-57599530	11qB1.3	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (Galnt10), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C330012K04Rik; ppGaNTase; GalNAc-T10; AU018154; Galnt9; GalNAc-T9	C330012K04Rik; ppGaNTase; GalNAc-T10; AU018154; Galnt9; GalNAc-T9
Mus musculus	RefSeq	ILMN_212503	ILMN_212503	GALNT10	NM_134189.2	NM_134189.2		171212	46877106	NM_134189.2	Galnt10	NP_598950.2	ILMN_2627238	004290253	S	1086	GTGGACCGGAAATGGTTCTGGGAGTTGGGTGGCTATGACCCTGGCTTGGA	11	+	57585000-57585049	11qB1.3	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (Galnt10), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C330012K04Rik; ppGaNTase; GalNAc-T10; AU018154; Galnt9; GalNAc-T9	C330012K04Rik; ppGaNTase; GalNAc-T10; AU018154; Galnt9; GalNAc-T9
Mus musculus	RefSeq	ILMN_203201	ILMN_258666	EZH1	XM_903904.2	XM_903904.2		14055	94391064	XM_903904.2	Ezh1	XP_908997.1	ILMN_2555484	003830356	S	3235	CTTGGACTGTCCTCTTAGCTCCACCCACATGCACACACCTACTGAGTATG				11qD	PREDICTED: Mus musculus enhancer of zeste homolog 1 (Drosophila), transcript variant 4 (Ezh1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195040	ILMN_242327	RNF24	NM_178607.3	NM_178607.3		51902	118130609	NM_178607.3	Rnf24	NP_848722.1	ILMN_2691509	002480739	S	1712	CCTCCAATAGGCTTTGTGAACAGTGTAAATTCGCCGTGTAAAGCACAGAC	2	-	131127960-131128009	2qF1	Mus musculus ring finger protein 24 (Rnf24), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D2Ertd504e; 4930505A13Rik; AI317164; 2810473M14Rik; C86507	D2Ertd504e; 4930505A13Rik; AI317164; 2810473M14Rik; C86507
Mus musculus	RefSeq	ILMN_195040	ILMN_242327	RNF24	NM_178607.3	NM_178607.3		51902	118130609	NM_178607.3	Rnf24	NP_848722.1	ILMN_2690715	005260014	S	3032	CTCAAGACCACTGAACTCTTATGTGTCTTTAAGTAGCTAGAGGATTGGGT	2	-	131126640-131126689	2qF1	Mus musculus ring finger protein 24 (Rnf24), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D2Ertd504e; 4930505A13Rik; AI317164; 2810473M14Rik; C86507	D2Ertd504e; 4930505A13Rik; AI317164; 2810473M14Rik; C86507
Mus musculus	RefSeq	ILMN_195040	ILMN_242327	RNF24	NM_178607.3	NM_178607.3		51902	118130609	NM_178607.3	Rnf24	NP_848722.1	ILMN_1212840	002030017	S	1263	GTCCCTGTGTAACCCAGGGGCCAGAGTACTGCTCAAGTATACCACAAGTG	2	-	131128409-131128458	2qF1	Mus musculus ring finger protein 24 (Rnf24), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D2Ertd504e; 4930505A13Rik; AI317164; 2810473M14Rik; C86507	D2Ertd504e; 4930505A13Rik; AI317164; 2810473M14Rik; C86507
Mus musculus	RefSeq	ILMN_223078	ILMN_223078	RNF103	NM_009543.1	NM_009543.1		22644	6678630	NM_009543.1	Rnf103	NP_033569.1	ILMN_2759058	001690687	S	3135	GAGCAGGTTTCTTACCCTAAGTGTTTTCTCCCTTTTTACAATCTCTGTCC	6	+	71459471-71459520	6qC1	Mus musculus ring finger protein 103 (Rnf103), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW212918; AW146237; Zfp103; kf-1	AW212918; AW146237; Zfp103; kf-1
Mus musculus	Riken	ILMN_206836	ILMN_206836	D930027P08RIK	ri|D930027P08|PX00202O10|AK086428|2594					AK086428	D930027P08Rik		ILMN_2583032	003830731	S	2379	TCCACCCCGCAATGAAGAGAGCAAAGCATAGGACAGTCACCCCTCTACAC										
Mus musculus	RefSeq	ILMN_221620	ILMN_221620	GRTP1	NM_025768.2	NM_025768.2		66790	85861225	NM_025768.2	Grtp1	NP_080044.2	ILMN_2737940	005360039	S	1184	CCACAACGTTCCTGCTGTAAATACTTGAAATCACGACACTCAATGTGAAC	8	-	13176945-13176994	8qA1.1	Mus musculus GH regulated TBC protein 1 (Grtp1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	C81211; Tbc1d6; 5430401C05Rik	C81211; Tbc1d6; 5430401C05Rik
Mus musculus	MEEBO	ILMN_193955	ILMN_193955	BC004701	scl53981.2_285				27414500	NM_146235	BC004701		ILMN_1218041	002630427	S	18	GGACACAACCCAGAGTTAGTGGGAGACTACAAGTTTTAGGCCTCAGTTCC										
Mus musculus	RefSeq	ILMN_207487	ILMN_207487	SMARCAL1	XM_149037.1	XM_149037.1			20848800	XM_149037.1	Smarcal1		ILMN_2587826	003370563	I	71	TCATTCCGTGGTCTCATCTCCCCAACTGGGTCAGTCAGCATACTAGGCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IDA]		
Mus musculus	RefSeq	ILMN_239222	ILMN_239222	SLC16A3	NM_001038653.1	NM_001038653.1		80879	84579884	NM_001038653.1	Slc16a3	NP_001033742.1	ILMN_3149256	001090497	A	1814	CAAGGAAGCCCCATAGTTATCAGCCACCTAAACCAGGGACCCAGCCTGCT	11	+	120819647-120819696	11qE2	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 3 (Slc16a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism [goid 15355] [evidence IEA]	Mct4; Mct3	Mct4; Mct3
Mus musculus	RefSeq	ILMN_254373	ILMN_254373	GAB3	NM_153073.1	NM_153073.1		210710	23346478	NM_153073.1	Gab3	NP_694713.1	ILMN_3133748	002850364	A	1422	CCACCATCCAGGAACACACATCTCTAACCAGGACTTACACTGTGCCTTGC	X	-	71252815-71252820:71254531-71254574	XqA7.3	Mus musculus growth factor receptor bound protein 2-associated protein 3 (Gab3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5930433H21Rik	5930433H21Rik
Mus musculus	RefSeq	ILMN_209489	ILMN_209489	MBOAT2	NM_026037.2	NM_026037.2		67216	31981087	NM_026037.2	Mboat2	NP_080313.2	ILMN_2782248	007650646	S	1804	GAAGAGAGACTAACTGGGTGGAAAGGGATGGTCTCGGATAGGGGGTTTCC	12	+	25548411-25548460	12qA1.3	Mus musculus membrane bound O-acyltransferase domain containing 2 (Mboat2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	Oact2; AW547221; AU022889; 2810049G06Rik; Moact2	Oact2; AW547221; AU022889; 2810049G06Rik; Moact2
Mus musculus	RefSeq	ILMN_207060	ILMN_222003	GLT1D1	NM_177005.4	NM_177005.4		319804	147901174	NM_177005.4	Glt1d1	NP_795979.2	ILMN_1236780	001690228	S	1400	GGGGCCTTTGGAGGACTGTTTCAAGGACTGCTTTTACAACGTATGGAGGC				5qG1.2	Mus musculus glycosyltransferase 1 domain containing 1 (Glt1d1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	5730455A04Rik	5730455A04Rik
Mus musculus	RefSeq	ILMN_213618	ILMN_213618	CCR6	NM_009835.2	NM_009835.2		12458	31981855	NM_009835.2	Ccr6	NP_033965.1	ILMN_2888448	001010132	S	1677	GCATCGTCCTTTACCATGTAACACGAGAGCACAAAGCAACATTGCCCCAA	17	+	8095223-8095242:8095243-8095272	17qA1	Mus musculus chemokine (C-C motif) receptor 6 (Ccr6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4945] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cmkbr6	Cmkbr6
Mus musculus	Riken	ILMN_201901	ILMN_201901	4933416E05RIK	ri|4933416E05|PX00020H10|AK016830|1417					AK016830	4933416E05Rik		ILMN_1253583	002940286	S	786	GAAATATCTGTCTCAGCACCAGCTCTTGCACACAGGCGAGAAGCCCTACC										
Mus musculus	MEEBO	ILMN_184539	ILMN_184539	TNFRSF18	scl0002685.1_109	NM_009400.1			6678382	NM_009400.1	Tnfrsf18		ILMN_2419494	003130639	S	7	GTCATGGCTGCATGCATTTTCTTCCTAACCACAGTCCAGCTCGGCCTGCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222005	ILMN_222005	OLFR656	NM_147075.1	NM_147075.1		259078	22128816	NM_147075.1	Olfr656	NP_667286.1	ILMN_1218528	004480132	S	625	GGGCTGACAGCCGCACTGTTGGTCATTGGAGTTGATTTATTCTGCATTGG	7	+	111766795-111766844	7qE3	Mus musculus olfactory receptor 656 (Olfr656), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR27-1; MGC123872	MOR27-1; MGC123872
Mus musculus	Riken	ILMN_204977	ILMN_204977	PTPN4	ri|B430311G24|PX00072M19|AK046683|2364					AK046683	Ptpn4		ILMN_1231429	005490519	S	2089	ATTGTTTCCCGGGTAGCACCAGGAACACCTTTATCTGAATTATGACACTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4726] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198156	ILMN_258112	EG666668	XM_985281.1	XM_985281.1		666668	94401826	XM_985281.1	EG666668	XP_990375.1	ILMN_1220063	005360575	S	707	CCAAGGCCACTTTTTATGCCACCTCCAAGACCTGCAGCTACCTGACCCCT	17	+	26680488-26680537	17qA3.3	PREDICTED: Mus musculus predicted gene, EG666668 (EG666668), mRNA.					
Mus musculus	RefSeq	ILMN_199604	ILMN_238766	GPR98	NM_054053.4	NM_054053.4		110789	153791473	NM_054053.4	Gpr98	NP_473394.3	ILMN_1257597	001500243	S	8762	CATCCCTGTGGTGGGCTCTCTGGTTTTGGAGGAAGGGGAAACAACAGCAG				13qC3	Mus musculus G protein-coupled receptor 98 (Gpr98), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence NAS]	Mass1; Mgr1; Frings; VLGR1	Mass1; Mgr1; Frings; VLGR1
Mus musculus	RefSeq	ILMN_211641	ILMN_238766	GPR98	NM_054053.4	NM_054053.4		110789	153791473	NM_054053.4	Gpr98	NP_473394.3	ILMN_2618066	007380523	S	19176	CAATTTAAAAAAGACTGCTATAATAAAAGATCCGATCATTCCTGTAATGT				13qC3	Mus musculus G protein-coupled receptor 98 (Gpr98), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence NAS]	Mass1; Mgr1; Frings; VLGR1	Mass1; Mgr1; Frings; VLGR1
Mus musculus	RefSeq	ILMN_199357	ILMN_199357	LOC386413	XM_359216.1	XM_359216.1			38081562	XM_359216.1	LOC386413		ILMN_1219313	004010561	S	924	CGGGAACAACGCCCTAGAAAAAACAAGAAGAGAAAAAGATAGACACTACC										
Mus musculus	RefSeq	ILMN_210150	ILMN_210150	KCNV2	NM_183179.1	NM_183179.1		240595	34147231	NM_183179.1	Kcnv2	NP_899002.1	ILMN_1253791	004900112	S	4738	GCGTTATCAAGGTTTCCCTGGTCACTCACAAAGGCTTAGTCACAATGAGC	19	+	27411330-27411379	19qC1	Mus musculus potassium channel, subfamily V, member 2 (Kcnv2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	KV11.1; MGC38990	KV11.1; MGC38990
Mus musculus	RefSeq	ILMN_219785	ILMN_219785	KCNA5	NM_145983.1	NM_145983.1		16493	22122428	NM_145983.1	Kcna5	NP_666095.1	ILMN_1259851	006280471	S	2474	GGCAAATATTATTCTTATGGCTGACGAGTGCATTTTGTACAGCAGTGCAC	6	-	126482907-126482956	6qF3	Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 5 (Kcna5), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43267] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 19870] [evidence IDA]	MGC25248; Kv1.5	MGC25248; Kv1.5
Mus musculus	RefSeq	ILMN_185884	ILMN_228274	1110014N23RIK	XM_983571.1	XM_983571.1		68505	94405760	XM_983571.1	1110014N23Rik	XP_988665.1	ILMN_2430830	004060598	S	464	CACCCCGTGTTAAGAAAAACAGGGATTAAAGGAAAGAGACCCAGATTACA				19qA	PREDICTED: Mus musculus RIKEN cDNA 1110014N23 gene, transcript variant 1 (1110014N23Rik), mRNA.					
Mus musculus	Riken	ILMN_207429	ILMN_207429	4921535G17RIK	ri|4921535G17|PX00639C15|AK076613|2847					AK076613	4921535G17Rik		ILMN_1249352	003140273	S	2543	ATGGAGGTCCTTGCTGTCTGGGCTGCTTGTGATGGAGGGTGTGGCATGTG										
Mus musculus	MEEBO	ILMN_189751	ILMN_189751	RAD51AP1	scl28389.9_143				6679610	NM_009013	Rad51ap1		ILMN_2753226	005420709	S	796	TCAGGATCTCCATCTTTACCCCAGGCAGTTGGTCTTCCTTCTGAGGCCAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IPI]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_189751	ILMN_189751	RAD51AP1	scl28389.9_143				6679610	NM_009013	Rad51ap1		ILMN_1258550	006370082	S	794	AGTCAGGATCTCCATCTTTACCCCAGGCAGTTGGTCTTCCTTCTGAGGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IPI]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_197333	ILMN_197333	LOC381395	XM_358564.1	XM_358564.1			38075183	XM_358564.1	LOC381395		ILMN_2527762	006270386	S	312	AGGAGTAGGTCTGGTCATCTCCATGCCGTTCTTCTTCATGCGGCGGCAGG										
Mus musculus	RefSeq	ILMN_218214	ILMN_218214	HHAT	NM_144881.2	NM_144881.2		226861	31559953	NM_144881.2	Hhat	NP_659130.2	ILMN_2864913	004040736	S	2342	AGGGCTGCTGCTTTCTGAGACTTGTAGCCATGGAGGAACATGGTGGTTCC	1	-	194213797-194213846	1qH6	Mus musculus hedgehog acyltransferase (Hhat), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IMP]	2810432O22Rik; AI462858; Skn; MGC11697	2810432O22Rik; AI462858; Skn; MGC11697
Mus musculus	RefSeq	ILMN_211041	ILMN_237002	MAN1C1	NM_207237.2	NM_207237.2		230815	118131038	NM_207237.2	Man1c1	NP_997120.1	ILMN_1253541	005130767	S	2465	GCGCCTACACGTTCCTTTCTATGGGGGAATTTCTGTGTCCCCACACTTGC	4	-	134119375-134119424	4qD3	Mus musculus mannosidase, alpha, class 1C, member 1 (Man1c1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	The chemical reactions and pathways resulting in the formation of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 30166] [evidence ISO]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence ISO]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISO]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence ISO]	AI593348	AI593348
Mus musculus	RefSeq	ILMN_211041	ILMN_237002	MAN1C1	NM_207237.2	NM_207237.2		230815	118131038	NM_207237.2	Man1c1	NP_997120.1	ILMN_1230894	005700747	S	2877	TGGTCCCAAATGTTACAAATCACTAATAATGCTATTTTCATTACTGTAAT	4	-	134118963-134119012	4qD3	Mus musculus mannosidase, alpha, class 1C, member 1 (Man1c1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	The chemical reactions and pathways resulting in the formation of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 30166] [evidence ISO]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence ISO]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISO]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence ISO]	AI593348	AI593348
Mus musculus	MEEBO	ILMN_188146	ILMN_188146	SCL0002165.1_97	scl0002165.1_97	AK015641.1			12854047	AK015641.1	scl0002165.1_97		ILMN_1224623	002100672	S	20	GTACAGTATGCAGCACAATCAGCCGATGGTACACAGCAGTTCTTTGTCCC										
Mus musculus	Riken	ILMN_206987	ILMN_206987	5031438A03RIK	ri|5031438A03|PX00642L13|AK077267|1033					AK077267	5031438A03Rik		ILMN_1237645	001240280	S	977	GGTTCGTTTCTCTAACGAGATCCAAGAGGCTCCACCCCAAGGAAGACCGC										
Mus musculus	RefSeq	ILMN_223144	ILMN_223144	CSNK1A1	NM_146087.2	NM_146087.2		93687	118130247	NM_146087.2	Csnk1a1	NP_666199.1	ILMN_1254710	005550497	S	1851	GCATATTTGTCACGGAAATTTAGTTACCGTCTTACAACTGAACATGTATG	18	+	61747791-61747840	18qE1	Mus musculus casein kinase 1, alpha 1 (Csnk1a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MGC30571; 4632404G05Rik; MGC29354; 5430427P18Rik; 2610208K14Rik; Csnk1a	MGC30571; 4632404G05Rik; MGC29354; 5430427P18Rik; 2610208K14Rik; Csnk1a
Mus musculus	RefSeq	ILMN_197581	ILMN_240244	EG668761	XM_001003482.2	XM_001003482.2		668761	149265862	XM_001003482.2	EG668761	XP_001003482.2	ILMN_1245584	001410692	S	56	AAGGCCTCGTTGGTAAGCACCGCCGCAAGCACCCAGGCATCCACCAGAAT	14	-	109091755-109091804	14qE3	PREDICTED: Mus musculus predicted gene, EG668761 (EG668761), mRNA.					
Mus musculus	RefSeq	ILMN_209749	ILMN_255808	GC	NM_008096.1	NM_008096.1		14473	51172611	NM_008096.1	Gc	NP_032122.1	ILMN_1224923	003170100	S	1223	GAAGAGGCAACTAACTTCTTTCATCGAAAAAGGTCAAGAAATGTGTGCAG	5	-	89864012-89864061	5qE1	Mus musculus group specific component (Gc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 42359] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 5499] [evidence IEA]; Enables the directed movement of vitamins into, out of, within or between cells. A vitamin is one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body [goid 51183] [evidence IEA]	DBP	DBP
Mus musculus	RefSeq	ILMN_186784	ILMN_315555	PTAR1	XM_001477013.1	XM_001477013.1		72351	149270624	XM_001477013.1	Ptar1	XP_001477063.1	ILMN_2438463	005700133	S	1634	CCCGCAGAAGCACTTGGCGCTGACTGCAGTTCTGAGAACACAATGGCTAC				19qB	PREDICTED: Mus musculus protein prenyltransferase alpha subunit repeat containing 1 (Ptar1), mRNA.					
Mus musculus	RefSeq	ILMN_186784	ILMN_315555	PTAR1	XM_001477013.1	XM_001477013.1		72351	149270624	XM_001477013.1	Ptar1	XP_001477063.1	ILMN_1224384	005690468	S	974	CAGACTGCCCTGGGGGCGCTTTGAATGACTCGCTCCAGATTCCAACAAGC				19qB	PREDICTED: Mus musculus protein prenyltransferase alpha subunit repeat containing 1 (Ptar1), mRNA.					
Mus musculus	RefSeq	ILMN_214410	ILMN_214410	LRRFIP1	NM_008515.3	NM_008515.3		16978	145966845	NM_008515.3	Lrrfip1	NP_032541.1	ILMN_1232861	005130274	S	2278	GAGCTCTGGACTTGATGCACAGGGGCCTCTTAATCCCACCAACAGGGGTG				1qD	Mus musculus leucine rich repeat (in FLII) interacting protein 1 (Lrrfip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AU024550; Fliiap1	AU024550; Fliiap1
Mus musculus	RefSeq	ILMN_214410	ILMN_214410	LRRFIP1	NM_008515.3	NM_008515.3		16978	145966845	NM_008515.3	Lrrfip1	NP_032541.1	ILMN_2647720	004880500	S	680	TATGGCAGCCACCTCAACTCCAGCTCCCGGGCCTCTTCTAGGGCCAGCTC				1qD	Mus musculus leucine rich repeat (in FLII) interacting protein 1 (Lrrfip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AU024550; Fliiap1	AU024550; Fliiap1
Mus musculus	RefSeq	ILMN_220919	ILMN_254511	TSPYL4	NM_030203.2	NM_030203.2		72480	113865975	NM_030203.2	Tspyl4	NP_084479.1	ILMN_1234395	000020750	S	3580	CCGCACAATGATCTCTGAAGTCTGAAGACTTTTTGAAAACTGTTGCTATG	10	+	34020806-34020855	10qB1	Mus musculus TSPY-like 4 (Tspyl4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		B230210I21Rik; 2610102M01Rik; D10Bwg0791e	B230210I21Rik; 2610102M01Rik; D10Bwg0791e
Mus musculus	RefSeq	ILMN_199587	ILMN_199587	LOC382765	XM_356666.1	XM_356666.1			38074751	XM_356666.1	LOC382765		ILMN_1253740	005910079	S	663	CAATGGGACAGTAGAGGAGCTGGGGGAAGCTAAAGATTGTGCTGAAACGG										
Mus musculus	RefSeq	ILMN_216167	ILMN_216167	CYP4A12B	NM_172306.2	NM_172306.2		13118	86198313	NM_172306.2	Cyp4a12b	NP_758510.2	ILMN_1217072	004150500	S	2317	CTCCCCTTCAAACTCTCCACCTTTCAGCTTACATTTAAGAGTCTTGCCAT	4	+	115111561-115111610	4qD1	Mus musculus cytochrome P450, family 4, subfamily a, polypeptide 12B (Cyp4a12b), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	BC060945; Cyp4a12	BC060945; Cyp4a12
Mus musculus	RefSeq	ILMN_231528	ILMN_231528	4432416J03RIK	NM_030069.1	NM_030069.1		78252	21313425	NM_030069.1	4432416J03Rik	NP_084345.1	ILMN_2931918	003400255	S	2906	CCACTGGGATTCAGTAGCCACAGTCCAAAGTCCACAAACTCACTGTGTGA	9	-	48070260-48070309	9qA5.3	Mus musculus RIKEN cDNA 4432416J03 gene (4432416J03Rik), mRNA.				AI323362	AI323362
Mus musculus	RefSeq	ILMN_213620	ILMN_213620	HSPD1	NM_010477.3	NM_010477.3		15510	142366334	NM_010477.3	Hspd1	NP_034607.2	ILMN_2713841	004120671	S	1932	GGTTTCCTTTGACGATATATAATGGTTTACTGCTGTCATTGTCCATGCCT	1	-	55134941-55134990	1qC1.2	Mus musculus heat shock protein 1 (chaperonin) (Hspd1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 44459] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IDA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence ISO]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IDA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence ISO]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IGI]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IDA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence ISO]; Any process that activates or increases the frequency, rate, or extent of interferon-alpha production [goid 32727] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence ISO]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with lipopolysaccharide [goid 1530] [evidence IDA]	Hsp60; 60kDa	Hsp60; 60kDa
Mus musculus	RefSeq	ILMN_213620	ILMN_213620	HSPD1	NM_010477.3	NM_010477.3		15510	142366334	NM_010477.3	Hspd1	NP_034607.2	ILMN_2639036	005670192	S	157	GTAAAATTTGGTGCGGACGCTCGAGCCTTAATGCTTCAAGGTGTAGACCT	1	-	55143646-55143695	1qC1.2	Mus musculus heat shock protein 1 (chaperonin) (Hspd1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 44459] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IDA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence ISO]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IDA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence ISO]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IGI]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IDA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence ISO]; Any process that activates or increases the frequency, rate, or extent of interferon-alpha production [goid 32727] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence ISO]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with lipopolysaccharide [goid 1530] [evidence IDA]	Hsp60; 60kDa	Hsp60; 60kDa
Mus musculus	Riken	ILMN_204288	ILMN_204288	9630046H06RIK	ri|9630046H06|PX00116F03|AK079372|2125					AK079372	9630046H06Rik		ILMN_1257950	006560072	S	1630	GGACCACACTCCCGACCCTCACAGATAGGCTGGGTTATGCTCACTTTCCT										
Mus musculus	RefSeq	ILMN_208652	ILMN_208652	IL8RA	NM_178241.4	NM_178241.4		227288	110665720	NM_178241.4	Il8ra	NP_839972.1	ILMN_2588216	003420398	S	1047	GGAGGTTTTGACACACCGCCGTGTTGCCTTTCATACGTCTCTCACCGCTA	1	-	74238387-74238436	1qC3	Mus musculus interleukin 8 receptor, alpha (Il8ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with interleukin-8 to initiate a change in cell activity [goid 4918] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	CXCR1	CXCR1
Mus musculus	RefSeq	ILMN_222665	ILMN_222665	OLFR357	NM_146623.1	NM_146623.1		258616	33239281	NM_146623.1	Olfr357	NP_666834.1	ILMN_2753127	002490446	S	563	CCTGTAGCAGCACCCAACTCAACACCTTGATGATTCATACAGAAGGAGTG	2	+	36852894-36852943	2qB	Mus musculus olfactory receptor 357 (Olfr357), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR138-3	MOR138-3
Mus musculus	Riken	ILMN_205421	ILMN_205421	E230016K23RIK	ri|E230016K23|PX00210K15|AK054074|2142					AK054074	E230016K23Rik		ILMN_1245466	002600543	S	1897	CTTGCAATGTAGCTCAGGCTGGCCTTGAACTCTTCATCCTCTGGCTCAGC										
Mus musculus	Riken	ILMN_204077	ILMN_204077	A730028O12RIK	ri|A730028O12|PX00149L12|AK042835|1038					AK042835	A730028O12Rik		ILMN_1231694	006840136	S	499	GTTGTAGTGCAAAATGTCATGATGCTTAACACAGCAGACAATGAGAAGAG										
Mus musculus	RefSeq	ILMN_198613	ILMN_314480	LOC211705	XR_032965.1	XR_032965.1		211705	149271947	XR_032965.1	LOC211705		ILMN_1226128	004900671	S	687	TCGAGGGTGATTCCAAAGCAGCTTAGTTGATCGCCAACTTGCTGGCCACA				XqB	PREDICTED: Mus musculus similar to prohibitin (LOC211705), misc RNA.					
Mus musculus	RefSeq	ILMN_222971	ILMN_222971	H1F0	NM_008197.3	NM_008197.3		14958	85838505	NM_008197.3	H1f0	NP_032223.2	ILMN_1259559	005960343	S	2207	CCTTTTTAAACAAGTGTAACTAGTGCCCGGGAGAAATTACTGTGGTTGTA	15	+	78860848-78860897	15qE1	Mus musculus H1 histone family, member 0 (H1f0), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H1(0); MGC98218; MGC117919; H1fv; MGC19309; D130017D06Rik	H1(0); MGC98218; MGC117919; H1fv; MGC19309; D130017D06Rik
Mus musculus	RefSeq	ILMN_218634	ILMN_323340	A530021J07RIK	XR_035424.1	XR_035424.1		330578	149257462	XR_035424.1	A530021J07Rik		ILMN_1215779	001580414	S	1265	GAGGACGGTGGGACGCATGCTCATTTTCCTGTGCTGTTCTTAGGATGGAA				7qD3	PREDICTED: Mus musculus Riken cDNA A530021J07 gene (A530021J07Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_235862	ILMN_235862	SMCHD1	NM_028887.2	NM_028887.2		74355	40254164	NM_028887.2	Smchd1	NP_083163.2	ILMN_2853225	002360553	S	4002	GAATCCACCAGACAGAATAGAAGGCCAAAAGGTGACGTACCAAACTGAGC	17	-	71694675-71694677:71694678-71694705:71698226-71698244	17qE1.3	Mus musculus SMC hinge domain containing 1 (Smchd1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4931400A14Rik; mKIAA0650; AW554188	4931400A14Rik; mKIAA0650; AW554188
Mus musculus	RefSeq	ILMN_217533	ILMN_217533	1700034H14RIK	NM_025969.3	NM_025969.3		67105	146134901	NM_025969.3	1700034H14Rik	NP_080245.1	ILMN_2685133	004670598	S	998	GAACGGATCTGTTCTCACTGTGACCCTCAATTCTCTTCCAGAATGTTCAG				18qE4	Mus musculus RIKEN cDNA 1700034H14 gene (1700034H14Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		2700002I20Rik	2700002I20Rik
Mus musculus	RefSeq	ILMN_217533	ILMN_217533	1700034H14RIK	NM_025969.3	NM_025969.3		67105	146134901	NM_025969.3	1700034H14Rik	NP_080245.1	ILMN_2684388	005870239	S	335	CAGCCTTTGAGATGGGGGCTGCGAGAGCAGAAGATAACAGTACAACCTAG				18qE4	Mus musculus RIKEN cDNA 1700034H14 gene (1700034H14Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		2700002I20Rik	2700002I20Rik
Mus musculus	RefSeq	ILMN_217533	ILMN_217533	1700034H14RIK	NM_025969.3	NM_025969.3		67105	146134901	NM_025969.3	1700034H14Rik	NP_080245.1	ILMN_2732877	002970035	S	249	TTGTACAGCATGCGGAGAAGCTGCACGGGTCCTTGGGCAGGCAGTTGTTG				18qE4	Mus musculus RIKEN cDNA 1700034H14 gene (1700034H14Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		2700002I20Rik	2700002I20Rik
Mus musculus	RefSeq	ILMN_206203	ILMN_321894	LOC100039703	XM_001473614.1	XM_001473614.1		100039703	149245278	XM_001473614.1	LOC100039703	XP_001473664.1	ILMN_2578350	006580253	S	1602	TCTGGTTGTGCCATGGCTGCTAGCAATGGGAACAGTAGAAAAAGCCAAGC	1	-	164016948-164016997	1qH2.1	PREDICTED: Mus musculus similar to pORF2 (LOC100039703), mRNA.					
Mus musculus	RefSeq	ILMN_217539	ILMN_251100	2310043J07RIK	XM_916650.3	XM_916650.3		69665	149254409	XM_916650.3	2310043J07Rik	XP_921743.2	ILMN_2684465	002760333	S	786	CTTGTCAATCCTACTGGCCATCCTGCTTGTGGTCTTCCTCGTACTGGTCA				5qG2	PREDICTED: Mus musculus RIKEN cDNA 2310043J07 gene (2310043J07Rik), mRNA.			Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211326	ILMN_211326	ING5	NM_025454.2	NM_025454.2		66262	71037408	NM_025454.2	Ing5	NP_079730.1	ILMN_1237907	007610626	S	1723	CCAGTGTTGAACTGTCTTGAAATATTGGGGGGATGTCTACCCGGGGCCTG	1	+	95715862-95715911	1qD	Mus musculus inhibitor of growth family, member 5 (Ing5), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI225768; 1810018M11Rik; 1700027H23Rik; 1700001C14Rik	AI225768; 1810018M11Rik; 1700027H23Rik; 1700001C14Rik
Mus musculus	RefSeq	ILMN_215253	ILMN_211326	ING5	NM_025454.2	NM_025454.2		66262	71037408	NM_025454.2	Ing5	NP_079730.1	ILMN_2667300	004780278	S	448	AAAGAAGCTCCCGGGGCCGAGGCCGGCGGACGTCAGAAGAGGATACCCCA	1	+	95709264-95709313	1qD	Mus musculus inhibitor of growth family, member 5 (Ing5), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI225768; 1810018M11Rik; 1700027H23Rik; 1700001C14Rik	AI225768; 1810018M11Rik; 1700027H23Rik; 1700001C14Rik
Mus musculus	RefSeq	ILMN_211326	ILMN_211326	ING5	NM_025454.2	NM_025454.2		66262	71037408	NM_025454.2	Ing5	NP_079730.1	ILMN_2658171	001300286	S	1322	TGTGCACCACCTTTTCCTGTGAACTTACGGCCCTCCCTGGAGATTGAGCT	1	+	95715461-95715510	1qD	Mus musculus inhibitor of growth family, member 5 (Ing5), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI225768; 1810018M11Rik; 1700027H23Rik; 1700001C14Rik	AI225768; 1810018M11Rik; 1700027H23Rik; 1700001C14Rik
Mus musculus	Riken	ILMN_205323	ILMN_205323	9930039L23RIK	ri|9930039L23|PX00120N01|AK037024|2490					AK037024	9930039L23Rik		ILMN_1233113	006960347	S	1898	GATGTTGCTGTGTTGAAAGGGTGTGCATAGCACTGTGTCCTCGGGAAGGG										
Mus musculus	RefSeq	ILMN_195261	ILMN_195261	TLR6	NM_011604.2	NM_011604.2		21899	58743328	NM_011604.2	Tlr6	NP_035734.2	ILMN_3162337	001050288	S	2420	TACCACAAGCTGCGGGCTCTCATGGCACAGCGGACTTACTTGGAATGGCC	5	-	65344464-65344513	5qC3.1	Mus musculus toll-like receptor 6 (Tlr6), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of JUN kinase activity [goid 43507] [evidence ISO]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 8034] [evidence IMP]		
Mus musculus	RefSeq	ILMN_214557	ILMN_230745	GM1077	XM_992895.1	XM_992895.1		381831	94378743	XM_992895.1	Gm1077	XP_997989.1	ILMN_2649221	002070110	S	180	GCAGAAGTCAGGCGCTTCCCCCAAACCCTTGATTCATAGGACATCCAACC				6qC1	PREDICTED: Mus musculus gene model 1077, (NCBI) (Gm1077), mRNA.			Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209807	ILMN_209807	CREB3L2	NM_178661.3	NM_178661.3		208647	141803456	NM_178661.3	Creb3l2	NP_848776.1	ILMN_2599400	004010047	S	2348	AGGACCAAAGCGTCATTGCAGTCTTCTCTCCACCCTGTACCCCGGAGTCC	6	-	37281932-37281981	6qB1	Mus musculus cAMP responsive element binding protein 3-like 2 (Creb3l2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	C530025K05Rik; BBF2H7	C530025K05Rik; BBF2H7
Mus musculus	RefSeq	ILMN_210248	ILMN_210248	FMNL1	NM_019679.2	NM_019679.2		57778	118136289	NM_019679.2	Fmnl1	NP_062653.2	ILMN_2603689	007380452	S	3177	AGTGGAAGAAGGAAGCAGCTGCTGATACCTCAGGCAGGGAAGAGCCTCCA	11	+	103058651-103058700	11qE1	Mus musculus formin-like 1 (Fmnl1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; The orderly movement of cells from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate [goid 6929] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin [goid 5522] [evidence IDA]	Fnrl; Frls; Fmnl; AI553564; 8030453N10Rik	Fnrl; Frls; Fmnl; AI553564; 8030453N10Rik
Mus musculus	RefSeq	ILMN_221759	ILMN_221759	TAF1B	NM_020614.1	NM_020614.1		21340	10181155	NM_020614.1	Taf1b	NP_065639.1	ILMN_2739952	006400528	S	1585	GAAGAATCAAATTTTTCTTTGAGTTACCAGTTTATACTAAACATCTTCTC	12	+	25243053-25243102	12qA1.3	Mus musculus TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B (Taf1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase I (Pol I), originating at a Pol I-specific promoter [goid 6360] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4930408G01Rik; mTAFI68; A230108M10Rik; Tafi86	4930408G01Rik; mTAFI68; A230108M10Rik; Tafi86
Mus musculus	Riken	ILMN_205212	ILMN_205212	IL7	ri|D430026C11|PX00194J10|AK052452|2059					AK052452	Il7		ILMN_1248546	000990040	S	654	ACCTGAGAGACTGCCCAAGAAAATGATGGAAGGCTGCCAAGGTGCCCCTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; Any process that stops or reduces the activity of an enzyme [goid 43086] [evidence IDA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IDA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IGI]; The process by which a lymphoid progenitor cell becomes committed to becoming any type of T cell [goid 2360] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA];  [goid 5126] [evidence IEA]; Interacting selectively with the interleukin-7 receptor [goid 5139] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217669	ILMN_217669	ANTXR1	NM_054041.2	NM_054041.2		69538	140971258	NM_054041.2	Antxr1	NP_473382.1	ILMN_1229643	002260692	S	4907	GCGCAAAGGGAATTCATGCTGTGTAAAGTGGGTGGAATTCGTTTGCAAGC	6	-	87084154-87084203	6qD1	Mus musculus anthrax toxin receptor 1 (Antxr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2310008J16Rik; Antrx1; 2810405N18Rik; Tem8	2310008J16Rik; Antrx1; 2810405N18Rik; Tem8
Mus musculus	RefSeq	ILMN_217669	ILMN_217669	ANTXR1	NM_054041.2	NM_054041.2		69538	140971258	NM_054041.2	Antxr1	NP_473382.1	ILMN_1226183	003190411	S	4893	GACCGACAGTTCAGGCGCAAAGGGAATTCATGCTGTGTAAAGTGGGTGGA	6	-	87084168-87084217	6qD1	Mus musculus anthrax toxin receptor 1 (Antxr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2310008J16Rik; Antrx1; 2810405N18Rik; Tem8	2310008J16Rik; Antrx1; 2810405N18Rik; Tem8
Mus musculus	RefSeq	ILMN_230096	ILMN_230096	ZDHHC17	NM_172554.1	NM_172554.1		320150	27369783	NM_172554.1	Zdhhc17	NP_766142.1	ILMN_2822229	004640376	S	3028	GTGATGCACTGATCACGTTGTGTTGCAGCGTTTCCACACCCTCAGGGTCG	10	-	110380248-110380297	10qD1	Mus musculus zinc finger, DHHC domain containing 17 (Zdhhc17), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA0946; A230053P19Rik; HIP3; BB187739; HYPH; D130071N24Rik; Hip14	mKIAA0946; A230053P19Rik; HIP3; BB187739; HYPH; D130071N24Rik; Hip14
Mus musculus	RefSeq	ILMN_239761	ILMN_239761	GM1679	NM_001033459.1	NM_001033459.1		381667	85701974	NM_001033459.1	Gm1679	NP_001028631.1	ILMN_2864485	000510075	S	339	TATGCCAACACCACCTTGAATGCTGGGACCTGTGCTGCCTCCCACTGAGC	5	+	110595041-110595090	5qF	Mus musculus gene model 1679, (NCBI) (Gm1679), mRNA.					
Mus musculus	RefSeq	ILMN_185681	ILMN_231101	LOC630936	XR_001819.2	XR_001819.2		630936	149262501	XR_001819.2	LOC630936		ILMN_1255581	003390086	S	380	CCCCAGGAAGTACCTTCGCAGTGTAGGCGATGGAGAGACTGTGGAGTTTG	11	+	99793731-99793780	11qD	PREDICTED: Mus musculus similar to nuclease sensitive element binding protein 1 (LOC630936), misc RNA.					
Mus musculus	MEEBO	ILMN_213679	ILMN_213679	CDADC1	scl45474.12_97	XM_127813.3			38076331	XM_127813.3	Cdadc1		ILMN_2639589	000730634	S	2522	CCTGGACCGTAGTGTTTTAGTGCTTGCCACTGCTGGTATTTGAGGCTGTG								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213679	ILMN_213679	CDADC1	scl45474.12_97	XM_127813.3			38076331	XM_127813.3	Cdadc1		ILMN_2639588	000520564	S	2518	CCAACCTGGACCGTAGTGTTTTAGTGCTTGCCACTGCTGGTATTTGAGGC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201086	ILMN_230451	E030018B13RIK	XM_974431.1	XM_974431.1		381994	94380593	XM_974431.1	E030018B13Rik	XP_979525.1	ILMN_1239959	003830500	S	652	GCTGCCTTCCCCTACACATCAAGACCAGGGAGGACCCTACAATACCTTAC				7qC	PREDICTED: Mus musculus RIKEN cDNA E030018B13 gene (E030018B13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214748	ILMN_261980	C920016K16RIK	NM_001045559.1	NM_001045559.1		240067	113930751	NM_001045559.1	C920016K16Rik	NP_001039024.1	ILMN_2651505	002140630	S	2598	CTAGAAAATTGCAAAATTGAATACAGTGGATTTGCACACACCTGGGAGGG	17	+	33141992-33142041	17qB1	Mus musculus RIKEN cDNA C920016K16 gene (C920016K16Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC057593; MGC67168	BC057593; MGC67168
Mus musculus	Riken	ILMN_206316	ILMN_206316	PMSCL1	ri|D130011I06|PX00182M15|AK083794|2480					AK083794	Pmscl1		ILMN_1230499	003890053	S	1879	CCAGGTGCTCAGCGAATGTCATTTCCATATTGTCCCCAGCACCATTGGTA										
Mus musculus	RefSeq	ILMN_197721	ILMN_197721	LOC229494	XM_143290.1	XM_143290.1			20872642	XM_143290.1	LOC229494		ILMN_1230107	007650709	S	423	CCCGCAGGCAGGTCCATTGTATGTAGAAGTAGTTGTGGAAGAAGCAGTCC										
Mus musculus	RefSeq	ILMN_192949	ILMN_249891	NOD2	NM_145857.2	NM_145857.2		257632	83977453	NM_145857.2	Nod2	NP_665856.2	ILMN_1226395	003290390	S	4558	GGTGCTTTTATAGAAAATGCGATCATGAACTTCCGGCTATAAATAATCAC	8	+	91212310-91212359	8qC3	Mus musculus nucleotide-binding oligomerization domain containing 2 (Nod2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-18 production [goid 32701] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2224] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence ISA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IDA]; Any process that initiates an immune response [goid 2253] [evidence IMP]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus during an immune response, resulting in an increase in its intracellular or extracellular levels [goid 2381] [evidence IMP]; Any process of the innate immune response that takes place in the mucosal tissues [goid 2227] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2925] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production [goid 32695] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production [goid 32695] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule [goid 32494] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule [goid 32494] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; Any process that activates or increases the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria [goid 6965] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection [goid 45089] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence ISA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 2 signaling pathway [goid 34136] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade [goid 32874] [evidence ISA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nlrc2; F830032C23Rik; CD; Card15; ACUG; BLAU; IBD1	Nlrc2; F830032C23Rik; CD; Card15; ACUG; BLAU; IBD1
Mus musculus	RefSeq	ILMN_192949	ILMN_249891	NOD2	NM_145857.2	NM_145857.2		257632	83977453	NM_145857.2	Nod2	NP_665856.2	ILMN_2702208	001190288	S	4362	ATGCTTTAGGACATGGAGTTGGGGCTTGGAGGCTTGCAGGGGACAAAACC	8	+	91212114-91212163	8qC3	Mus musculus nucleotide-binding oligomerization domain containing 2 (Nod2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-18 production [goid 32701] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2224] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence ISA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IDA]; Any process that initiates an immune response [goid 2253] [evidence IMP]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus during an immune response, resulting in an increase in its intracellular or extracellular levels [goid 2381] [evidence IMP]; Any process of the innate immune response that takes place in the mucosal tissues [goid 2227] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2925] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production [goid 32695] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production [goid 32695] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule [goid 32494] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule [goid 32494] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; Any process that activates or increases the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria [goid 6965] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection [goid 45089] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence ISA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 2 signaling pathway [goid 34136] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade [goid 32874] [evidence ISA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nlrc2; F830032C23Rik; CD; Card15; ACUG; BLAU; IBD1	Nlrc2; F830032C23Rik; CD; Card15; ACUG; BLAU; IBD1
Mus musculus	RefSeq	ILMN_220341	ILMN_220341	OLFR136	NM_146807.1	NM_146807.1		258803	22129244	NM_146807.1	Olfr136	NP_667018.1	ILMN_2720846	006110538	S	752	TCTATGGTCCAGCCATTAGCATGTACCTTCAGCCTTCTTCATCCATTACA	17	+	38472855-38472904	17qB1	Mus musculus olfactory receptor 136 (Olfr136), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR256-7	MOR256-7
Mus musculus	RefSeq	ILMN_212748	ILMN_212748	NAMPT	NM_021524.1	NM_021524.1		59027	10946947	NM_021524.1	Nampt	NP_067499.1	ILMN_1232209	002750189	S	1461	GATCTTCTCCATACGGTTTTCAAGAATGGGAAGGTGACAAAAAGCTACTC	12	+	33524059-33524108	12qA3	Mus musculus nicotinamide phosphoribosyltransferase (Nampt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: pyrophosphate + nicotinamide nucleotide = PRPP + niacinamide [goid 47280] [evidence IDA]	Visfatin; Pbef; AI314458; 1110035O14Rik; Nampt	Visfatin; Pbef; AI314458; 1110035O14Rik; Nampt
Mus musculus	RefSeq	ILMN_212748	ILMN_212748	NAMPT	NM_021524.1	NM_021524.1		59027	10946947	NM_021524.1	Nampt	NP_067499.1	ILMN_2821850	001780600	S	2525	CTATAGTTGGTATGTCTTAAATGAATTGCTGGAGTGGGTAGTGAGTGTAC	12	+	33531624-33531673	12qA3	Mus musculus nicotinamide phosphoribosyltransferase (Nampt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: pyrophosphate + nicotinamide nucleotide = PRPP + niacinamide [goid 47280] [evidence IDA]	Visfatin; Pbef; AI314458; 1110035O14Rik; Nampt	Visfatin; Pbef; AI314458; 1110035O14Rik; Nampt
Mus musculus	RefSeq	ILMN_190228	ILMN_190228	ZBTB22	NM_020625.3	NM_020625.3		81630	148352332	NM_020625.3	Zbtb22	NP_065650.1	ILMN_1233129	004260398	S	2515	GGGTTGTCATGAAAGTGGGTGGACACAAGGTGGGAGCCGCGTAGTATAGG				17qB1	Mus musculus zinc finger and BTB domain containing 22 (Zbtb22), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110008J20Rik; Bing1; AI265210; AI415166; Zfp297	1110008J20Rik; Bing1; AI265210; AI415166; Zfp297
Mus musculus	RefSeq	ILMN_211219	ILMN_211219	RASGEF1B	NM_181318.4	NM_181318.4		320292	145312249	NM_181318.4	Rasgef1b	NP_851835.1	ILMN_1235409	001710037	S	2527	CCCATCCCCATAAATGTAAATGCTATGACTTTAAGGGTCTTGGGGGGAGG				5qE3	Mus musculus RasGEF domain family, member 1B (Rasgef1b), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4732452O09Rik; GPIgamma4; Gpig4	4732452O09Rik; GPIgamma4; Gpig4
Mus musculus	RefSeq	ILMN_218589	ILMN_211219	RASGEF1B	NM_181318.4	NM_181318.4		320292	145312249	NM_181318.4	Rasgef1b	NP_851835.1	ILMN_1256089	003370575	S	1542	CGCTCTACTTGGCTTCATACGAGAGTGAAGGACCCGAAAATAATATAGAG				5qE3	Mus musculus RasGEF domain family, member 1B (Rasgef1b), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4732452O09Rik; GPIgamma4; Gpig4	4732452O09Rik; GPIgamma4; Gpig4
Mus musculus	Riken	ILMN_206400	ILMN_206400	EIF2AK4	ri|4933428O03|PX00021E15|AK077199|1717					AK077199	Eif2ak4		ILMN_1245532	003120692	S	1355	CTAGACCTGAGGAAAACGTGCAGTGAGTATGAGAGTCGGGGTTCTGTCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IGI]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment [goid 9267] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of translation initiation, as a result of a stimulus indicating the organism is under stress [goid 43558] [evidence IDA]	Catalysis of the phosphorylation of the alpha subunit of eukaryotic translation initiation factor 2 (EIF2) [goid 4694] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_243096	ILMN_243096	OLFR773	NM_207008.1	NM_207008.1		257664	49170073	NM_207008.1	Olfr773	NP_996891.1	ILMN_2829343	002320332	S	790	GAGGTGGCCATCAACAAGGGTGTGATGATTCTCACTACTTCCATTGCCCC	10	-	128623636-128623685	10qD3	Mus musculus olfactory receptor 773 (Olfr773), mRNA.				MOR114-15; GA_x6K02T2PULF-10872859-10871923	MOR114-15; GA_x6K02T2PULF-10872859-10871923
Mus musculus	RefSeq	ILMN_215143	ILMN_215143	NBN	NM_013752.2	NM_013752.2		27354	31980741	NM_013752.2	Nbn	NP_038780.2	ILMN_2880745	002030438	S	2272	ACAGGAAATGGAGGTACAGAAACAACAAGCAAAGGAGGAATCTCTTGCTG	4	+	15916250-15916262:15918329-15918365	4qA2	Mus musculus nibrin (Nbn), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation [goid 1832] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence ISO]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]	Interacting selectively with damaged DNA [goid 3684] [evidence IDA]	Nbs1	Nbs1
Mus musculus	MEEBO	ILMN_208707	ILMN_208707	HRMT1L6	scl21634.2.1_1	NM_178891.3			46048378	NM_178891.3	Hrmt1l6		ILMN_2588765	002060170	S	2654	ATTTTCATGCATCCATAAGCCTGGAAATCCTTTGCAGCGCTTAGCTCCAC										
Mus musculus	Riken	ILMN_203253	ILMN_203253	KIF1C	ri|4831440N04|PX00102L20|AK029250|1721					AK029250	Kif1c		ILMN_1247250	005960164	S	1636	CTGGAGCTGGGGCAGACTTAGTTCTCAGGGAGACTCAAGACAGGCTTCTG						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [evidence IDA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]		
Mus musculus	RefSeq	ILMN_261046	ILMN_261046	DHRS9	NM_175512.2	NM_175512.2		241452	31342065	NM_175512.2	Dhrs9	NP_780721.1	ILMN_2959330	006860041	S	2718	CACCCTTCTTTTTGTCATGGAGGCTCAAATCCAGAATCTCGGGCATGGGC	2	+	69241044-69241093	2qC2	Mus musculus dehydrogenase/reductase (SDR family) member 9 (Dhrs9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C730025I08Rik; Rdh15	C730025I08Rik; Rdh15
Mus musculus	RefSeq	ILMN_191346	ILMN_261046	DHRS9	NM_175512.2	NM_175512.2		241452	31342065	NM_175512.2	Dhrs9	NP_780721.1	ILMN_2602089	006370309	S	2651	GATGGCCTCCTGAATCCTTGCCAAAGGAGACAGTTCTGTTACACTTGCCC	2	+	69240977-69241026	2qC2	Mus musculus dehydrogenase/reductase (SDR family) member 9 (Dhrs9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C730025I08Rik; Rdh15	C730025I08Rik; Rdh15
Mus musculus	RefSeq	ILMN_214130	ILMN_214130	OLFR1131	NM_146658.2	NM_146658.2		258652	110671320	NM_146658.2	Olfr1131	NP_666869.2	ILMN_1260028	007210504	S	875	GGAACAAGGATGTGAAAGAGGCCTTGAAGAAAATTAAAAGAAAAAGATGG	2	+	87469496-87469545	2qD	Mus musculus olfactory receptor 1131 (Olfr1131), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR177-4	MOR177-4
Mus musculus	MEEBO	ILMN_210932	ILMN_210932	BC025458	scl0231002.2_23	XM_131867.4			38079371	XM_131867.4	BC025458		ILMN_2610731	000460243	S	1452	AGAGCTTCCCAGAGACACCGGGGTTCCTTCAAGAGCAGAGGCCCACAGCC										
Mus musculus	RefSeq	ILMN_230723	ILMN_230723	LOC544988	NM_001024712.1	NM_001024712.1		544988	70608089	NM_001024712.1	LOC544988	NP_001019883.1	ILMN_3022092	000610091	I	70	GCCTGGGAGGAACCGAAAATCTTCAGTACTCGTCTCGCCACATGAACGTT	14	-	7937951-7938000	14qA1	Mus musculus hypothetical protein LOC544988 (LOC544988), mRNA.					
Mus musculus	RefSeq	ILMN_230723	ILMN_230723	LOC544988	NM_001024712.1	NM_001024712.1		544988	70608089	NM_001024712.1	LOC544988	NP_001019883.1	ILMN_3094403	003710086	A	202	GAATGTTTTCCTGGCTGCTCAGGCTATTTCAGAAAGAGAATGGCGATGAA	14	-	7933162-7933211	14qA1	Mus musculus hypothetical protein LOC544988 (LOC544988), mRNA.					
Mus musculus	MEEBO	ILMN_186887	ILMN_186887	AU044581	scl23157.20.1_2						AU044581		ILMN_2439354	006380392	S	20	TGTAACCAGCGCACAATCCTTCTCTATGGAGTCGGAAAAGAGCGTGATGA										
Mus musculus	MEEBO	ILMN_195587	ILMN_195587	2310047D13RIK	scl39924.1.1_173				51828563	XM_282971	2310047D13Rik		ILMN_2543108	000130768	S	1700	CAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATTTCTGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	Riken	ILMN_206533	ILMN_206533	D930046G03RIK	ri|D930046G03|PX00203E02|AK086699|2816					AK086699	D930046G03Rik		ILMN_2580808	000070475	S	2294	TACCCACCCACAACAGCCGAGGGCTCCAGCAGTACAGACTCAGACTCATG										
Mus musculus	Riken	ILMN_204903	ILMN_204903	A530083B17RIK	ri|A530083B17|PX00143M10|AK041099|588					AK041099	A530083B17Rik		ILMN_2568505	001980224	S	187	GACACAGACACAGACACACACTCACTCACTCACTCACTTGCTCACTCACT										
Mus musculus	Riken	ILMN_202964	ILMN_202964	A230007F14RIK	ri|A230007F14|PX00126I14|AK038420|1001					AK038420	A230007F14Rik		ILMN_1259901	004560168	S	761	ATCTATGCCAGTTGTAGGCTGAGGACTGCCCTGGCTCTCTGTGTTTGAGT										
Mus musculus	RefSeq	ILMN_200401	ILMN_200401	LOC384249	XM_357524.1	XM_357524.1			38081618	XM_357524.1	LOC384249		ILMN_2538629	003830187	S	188	CAGGTACCACACATGCTACCTCAATGCTGAATGTCGCGCGCGTGCCACTG										
Mus musculus	RefSeq	ILMN_186030	ILMN_231213	LOC665425	XM_976857.1	XM_976857.1		665425	94377289	XM_976857.1	LOC665425	XP_981951.1	ILMN_2432009	006060598	S	614	GGGAGAAGAACTCAAATTTTTGGTTTACTTTCAGAATGAAGACATCATCG	6	+	41132478-41132527		PREDICTED: Mus musculus similar to T-cell receptor beta chain V region LB2 precursor (LOC665425), mRNA.					
Mus musculus	RefSeq	ILMN_193241	ILMN_231213	LOC665425	XM_976857.1	XM_976857.1		665425	94377289	XM_976857.1	LOC665425	XP_981951.1	ILMN_1213664	006100091	S	134	CCTCCAAACTATGAACAAGTGGGTTTTCTGCTGGGTAACCCTTTGTCTCC	6	+	41108186-41108195:41108196-41108235		PREDICTED: Mus musculus similar to T-cell receptor beta chain V region LB2 precursor (LOC665425), mRNA.					
Mus musculus	RefSeq	ILMN_211911	ILMN_243522	OLFM3	NM_153157.2	NM_153157.2		229759	133892210	NM_153157.2	Olfm3	NP_694797.1	ILMN_1242083	006350168	S	159	TCCCAAACTCTCCCATCCCTGGTAGGACTGAACACCACAAGGCTGTCGGC	3	+	114784041-114784090	3qF3	Mus musculus olfactomedin 3 (Olfm3), transcript variant B, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B230206G02Rik	B230206G02Rik
Mus musculus	RefSeq	ILMN_210893	ILMN_210893	AGFG2	NM_178162.2	NM_178162.2		231801	31341133	NM_178162.2	Agfg2	NP_835456.1	ILMN_2610270	003390725	S	1470	TTCTTGTAGCACTGTGTCATTGGGGGAAGAAGGGGCTCTCCCCTCCTGGG	5	-	138092955-138092996:138092997-138093004	5qG2	Mus musculus ArfGAP with FG repeats 2 (Agfg2), transcript variant 2, mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	RABR; MGC7148; A630095P14Rik; MGC61203	RABR; MGC7148; A630095P14Rik; MGC61203
Mus musculus	RefSeq	ILMN_210893	ILMN_210893	AGFG2	NM_178162.2	NM_178162.2		231801	31341133	NM_178162.2	Agfg2	NP_835456.1	ILMN_2612774	000060403	S	2134	CCCGCCTCCTGTCAAGCACTTTAGTTAGCCCTGTCATGTTTGGATACCAG	5	-	138092291-138092340	5qG2	Mus musculus ArfGAP with FG repeats 2 (Agfg2), transcript variant 2, mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	RABR; MGC7148; A630095P14Rik; MGC61203	RABR; MGC7148; A630095P14Rik; MGC61203
Mus musculus	MEEBO	ILMN_210785	ILMN_210785	GRIK1	scl48250.16.1_16	NM_146072.1			22164777	NM_146072.1	Grik1		ILMN_1222061	001190474	S	2587	CAACTCCACTTCCGGGACTACATTATCTACAGATGTAGAGTGTGGCAAAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex [goid 8328] [evidence IC ]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity [goid 48172] [evidence TAS]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid [goid 14054] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32230] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA];  [goid 15277] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 15277] [evidence IGI];  [goid 15277] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212659	ILMN_212659	PIP5K1C	NM_008844.1	NM_008844.1		18717	6679322	NM_008844.1	Pip5k1c	NP_032870.1	ILMN_2628951	004830204	S	1964	CCCTCTACAGACATCTATTTTCCCACCGACGAGAGGAGCTGGGTGTACTC	10	+	80777843-80777863:80780071-80780099	10qC1	Mus musculus phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma (Pip5k1c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [evidence IDA]	AI835305; mKIAA0589; AI115456	AI835305; mKIAA0589; AI115456
Mus musculus	Riken	ILMN_204945	ILMN_204945	D330006C15RIK	ri|D330006C15|PX00190N22|AK052196|2136					AK052196	D330006C15Rik		ILMN_1251604	004150039	S	1	GGGGAACCAGACAGCAGCAACTAAGCCTGCACGGGTTTCTTTTTCTTTTC										
Mus musculus	RefSeq	ILMN_200140	ILMN_200140	LOC385630	XM_358810.1	XM_358810.1			38080645	XM_358810.1	LOC385630		ILMN_1248075	002490647	S	357	AAACATGGTTCTGCAGCTCCTCCACAGCCTCTCCAGAAGGCCACTCTCAG										
Mus musculus	RefSeq	ILMN_200480	ILMN_200480	LOC383257	XM_356948.1	XM_356948.1			38082578	XM_356948.1	LOC383257		ILMN_1240338	005050259	S	12	CAGGGACCTCATCAGTCGTGTCTACAAGATCCTGGAGATCGCACAGGGAC										
Mus musculus	RefSeq	ILMN_198717	ILMN_256096	USP35	XM_886523.3	XM_886523.3		244144	149257588	XM_886523.3	Usp35	XP_891616.2	ILMN_1239530	005870411	S	2718	TAAGGACACTGCCTATGTGCTCTTCTACCGCCAGAGGCCCAGGGAGGACC	7	-	104459960-104460009	7qE1	PREDICTED: Mus musculus ubiquitin specific peptidase 35, transcript variant 3 (Usp35), mRNA.					
Mus musculus	RefSeq	ILMN_249408	ILMN_249408	OLFR1251	NM_001011529.1	NM_001011529.1		259145	58372137	NM_001011529.1	Olfr1251	NP_001011529.1	ILMN_2871422	005310634	S	182	TTGCCTCTCTGTCACTCATGGATGCTGTTTATTCCACTGCCATCTCACCC	2	-	89507810-89507859	2qE1	Mus musculus olfactory receptor 1251 (Olfr1251), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-15P	MOR231-15P
Mus musculus	RefSeq	ILMN_209507	ILMN_209507	HNRNPH2	NM_019868.3	NM_019868.3		56258	145386563	NM_019868.3	Hnrnph2	NP_063921.1	ILMN_2596458	004120292	S	1943	TTGTAGGAGTGTACTTAAGCAGCAAGCATATTTAGGTTTAAAGCAGTTTC				XqE3	Mus musculus heterogeneous nuclear ribonucleoprotein H2 (Hnrnph2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Ftp-3; Ftp3; H'; DXHXS1271E; HNRNP	Ftp-3; Ftp3; H'; DXHXS1271E; HNRNP
Mus musculus	RefSeq	ILMN_209507	ILMN_209507	HNRNPH2	NM_019868.3	NM_019868.3		56258	145386563	NM_019868.3	Hnrnph2	NP_063921.1	ILMN_2680808	001170735	S	126	CCTTAAGGCACATACCTGAAGTGGATTTTCTGTCAGAAGCCACATTGAAT				XqE3	Mus musculus heterogeneous nuclear ribonucleoprotein H2 (Hnrnph2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Ftp-3; Ftp3; H'; DXHXS1271E; HNRNP	Ftp-3; Ftp3; H'; DXHXS1271E; HNRNP
Mus musculus	MEEBO	ILMN_188273	ILMN_188273	4930405P13RIK	scl41058.5.1_42						4930405P13Rik		ILMN_2451265	005670474	S	9	CTGCAATGTCGGACACCTCGGCCAAGCCTTGATTATCAAGGAGAGACTGG										
Mus musculus	RefSeq	ILMN_228402	ILMN_228402	SMEK2	NM_134034.1	NM_134034.1		104570	19527251	NM_134034.1	Smek2	NP_598795.1	ILMN_2907928	001410681	S	3268	GCCTTTGGCATTTGACAGGACATACACCCTAGGTAACAAACAGCACATAC	11	+	29119046-29119095	11qA3.3	Mus musculus SMEK homolog 2, suppressor of mek1 (Dictyostelium) (Smek2), mRNA.				AW557776; RP23-393O10.1; mKIAA1387; AW011752; KIAA1387	AW557776; RP23-393O10.1; mKIAA1387; AW011752; KIAA1387
Mus musculus	RefSeq	ILMN_190716	ILMN_228402	SMEK2	NM_134034.1	NM_134034.1		104570	19527251	NM_134034.1	Smek2	NP_598795.1	ILMN_1227704	006590152	S	1066	ACCAATAACAGATTCGGAACTAAGGCAAAAAATACATCAGACTTACAGGG	11	+	29088409-29088458	11qA3.3	Mus musculus SMEK homolog 2, suppressor of mek1 (Dictyostelium) (Smek2), mRNA.				AW557776; RP23-393O10.1; mKIAA1387; AW011752; KIAA1387	AW557776; RP23-393O10.1; mKIAA1387; AW011752; KIAA1387
Mus musculus	RefSeq	ILMN_190716	ILMN_228402	SMEK2	NM_134034.1	NM_134034.1		104570	19527251	NM_134034.1	Smek2	NP_598795.1	ILMN_2683138	002060487	S	3269	CCTTTGGCATTTGACAGGACATACACCCTAGGTAACAAACAGCACATACC	11	+	29119047-29119096	11qA3.3	Mus musculus SMEK homolog 2, suppressor of mek1 (Dictyostelium) (Smek2), mRNA.				AW557776; RP23-393O10.1; mKIAA1387; AW011752; KIAA1387	AW557776; RP23-393O10.1; mKIAA1387; AW011752; KIAA1387
Mus musculus	RefSeq	ILMN_210576	ILMN_210576	PTPRA	NM_008980.1	NM_008980.1		19262	6679556	NM_008980.1	Ptpra	NP_033006.1	ILMN_2607022	001850468	S	2641	CCTGTTAGGTGGAGATTTTGTATGTAAATGTGTTAGCACTGATAGTCCTT	2	+	130379349-130379398	2qF1	Mus musculus protein tyrosine phosphatase, receptor type, A (Ptpra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	RPTRalpha; PTPalpha; MGC118095; PTP[a]; Ptpa; RPTR[a]	RPTRalpha; PTPalpha; MGC118095; PTP[a]; Ptpa; RPTR[a]
Mus musculus	RefSeq	ILMN_190996	ILMN_254244	ADRA2A	NM_007417.2	NM_007417.2		11551	78711825	NM_007417.2	Adra2a	NP_031443.2	ILMN_1242170	000830736	S	3594	CAACCTGGTTTCTACTTATTTTAGGCAGACTGTGGAAGGCCTGTGATCTG	19	+	54123316-54123365	19qD2	Mus musculus adrenergic receptor, alpha 2a (Adra2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4935] [evidence IMP];  [goid 4938] [evidence TAS]	AW122659; alpha2-C10; Adra-2; alpha2A; Adra-2a	AW122659; alpha2-C10; Adra-2; alpha2A; Adra-2a
Mus musculus	Riken	ILMN_203225	ILMN_203225	MINT-PENDING	ri|C030017M24|PX00074G20|AK047725|1515					AK047725	Mint-pending		ILMN_1241113	001470300	S	1160	GTCTGCAAATTTACCTGCACGGCACCTTGCCCGTTGATAGACTGCCTGTC										
Mus musculus	RefSeq	ILMN_215962	ILMN_215962	FIGLA	NM_012013.1	NM_012013.1		26910	6753875	NM_012013.1	Figla	NP_036143.1	ILMN_2854992	005860253	S	517	AGCTGTGCGAGTGGCTTGAAGAAAGAAGAGGAGGGGCCTTGGGCGTATGC	6	+	85970748-85970797	6qC3	Mus musculus folliculogenesis specific basic helix-loop-helix (Figla), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISS]		
Mus musculus	RefSeq	ILMN_260217	ILMN_260217	CRLS1	NM_001024385.1	NM_001024385.1		66586	66932979	NM_001024385.1	Crls1	NP_001019556.1	ILMN_3062470	005340348	I	110	TCTGAGTTCTCGACTCTTGGACTCCGTGGAGGCCACACGGCCATGTTGGC	2	+	132672511-132672552:132672553-132672560	2qF2	Mus musculus cardiolipin synthase 1 (Crls1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]	0610009I22Rik; 4930557M15Rik; 5730490M08Rik; RP23-77H16.4	0610009I22Rik; 4930557M15Rik; 5730490M08Rik; RP23-77H16.4
Mus musculus	RefSeq	ILMN_260217	ILMN_260217	CRLS1	NM_001024385.1	NM_001024385.1		66586	66932979	NM_001024385.1	Crls1	NP_001019556.1	ILMN_3140091	003360671	A	1681	CGCAGGAGTCAGAGGGAGAACACATGTATTACGCTTTGCATCTTACAGGC	2	+	132692278-132692327	2qF2	Mus musculus cardiolipin synthase 1 (Crls1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]	0610009I22Rik; 4930557M15Rik; 5730490M08Rik; RP23-77H16.4	0610009I22Rik; 4930557M15Rik; 5730490M08Rik; RP23-77H16.4
Mus musculus	RefSeq	ILMN_235027	ILMN_235027	IFT52	NM_172150.2	NM_172150.2		245866	31981998	NM_172150.2	Ift52	NP_742162.2	ILMN_2788283	007560671	S	1676	GCACTTGAGTGACACATGGTTGCTGTGGCAGTGTGCACAATCTGTCCTGG	2	+	162737128-162737177	2qH2	Mus musculus intraflagellar transport 52 homolog (Chlamydomonas) (Ift52), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45862] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	NGD5; MGC47065; BC037708	NGD5; MGC47065; BC037708
Mus musculus	RefSeq	ILMN_214643	ILMN_214643	AMIGO3	NM_177275.4	NM_177275.4		320844	148539880	NM_177275.4	Amigo3	NP_796249.1	ILMN_2650266	002320730	S	2327	TGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAGGCCTCTCAAGAGC				9qF2	Mus musculus adhesion molecule with Ig like domain 3 (Amigo3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISO]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E430002N15Rik; ali3; mKIAA1851	E430002N15Rik; ali3; mKIAA1851
Mus musculus	RefSeq	ILMN_223255	ILMN_223255	1700086L19RIK	XM_358420.3	XM_358420.3		74284	94392961	XM_358420.3	1700086L19Rik	XP_358420.1	ILMN_2761449	005560279	S	895	CTTCGGAGAGTACCATCTATGGGATGGGCTACACTGGTGACCACTTGGAG	12	+	75396829-75396878	12qC3	PREDICTED: Mus musculus RIKEN cDNA 1700086L19 gene (1700086L19Rik), mRNA.					
Mus musculus	MEEBO	ILMN_217691	ILMN_217691	0610010F05RIK	scl0071675.1_286				50233766	NM_027860	0610010F05Rik		ILMN_2686463	003360209	S	4029	GATACATGGACAGGCATTTCTTCTGCCAAGTACGTTAAGGTTTTCCTTAC										
Mus musculus	RefSeq	ILMN_186825	ILMN_186825	U2AF1L4	NM_170760.3	NM_170760.3		233073	118130054	NM_170760.3	U2af1l4	NP_739566.1	ILMN_3160302	006100706	S	480	GCCGGCAGTATGAGATGGGGGAATGCACCCGAGGTGGCTTCTGCAACTTT	7	+	31349608-31349626:31349722-31349752	7qB1	Mus musculus U2 small nuclear RNA auxiliary factor 1-like 4 (U2af1l4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	U2af26; AF419339; AA407033; AI451269; AW553050	U2af26; AF419339; AA407033; AI451269; AW553050
Mus musculus	RefSeq	ILMN_218279	ILMN_218279	ARHGAP15	NM_153820.3	NM_153820.3		76117	90962990	NM_153820.3	Arhgap15	NP_722542.2	ILMN_2759756	004570722	S	1249	AAACTATGAGGTCTCTGGTAAAACGTCTCCCTCCACCAAATCATGATACC	2	+	44178223-44178272	2qB	Mus musculus Rho GTPase activating protein 15 (Arhgap15), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence ISO]	5830480G12Rik	5830480G12Rik
Mus musculus	RefSeq	ILMN_218279	ILMN_218279	ARHGAP15	NM_153820.3	NM_153820.3		76117	90962990	NM_153820.3	Arhgap15	NP_722542.2	ILMN_2693868	005220709	S	1495	GCTCAGAGGAAGACTGACAGCCGAGACGAGCTACTGAGTATGTTCACATC	2	+	44241988-44242004:44242005-44242037	2qB	Mus musculus Rho GTPase activating protein 15 (Arhgap15), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence ISO]	5830480G12Rik	5830480G12Rik
Mus musculus	RefSeq	ILMN_220408	ILMN_220408	ITPR3	NM_080553.2	NM_080553.2		16440	61102727	NM_080553.2	Itpr3	NP_542120.2	ILMN_1228385	004880215	S	8396	CTGTCCTGGATCAGGAAGATGGTAGCCTGCTGTTAGTAGCTTCACAGGGC	17	+	27258806-27258855	17qA3.3	Mus musculus inositol 1,4,5-triphosphate receptor 3 (Itpr3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The series of events required to receive a bitter taste stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50913] [evidence IMP]; The series of events required to receive a sweet taste stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50916] [evidence IMP]; The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates [goid 50917] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IDA]; Combining with inositol-1,4,5-triphosphate to initiate a change in cell activity [goid 8095] [evidence IDA];  [goid 5220] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ip3r3; Itpr-3	Ip3r3; Itpr-3
Mus musculus	RefSeq	ILMN_218682	ILMN_218682	PTPN18	NM_011206.2	NM_011206.2		19253	113199760	NM_011206.2	Ptpn18	NP_035336.2	ILMN_2821460	004050689	S	1319	CCGGGCCTGATGCCTACGAAGAAGTAACAGATGGAGCACAGACTGGAGGG	1	+	34530201-34530250	1qB	Mus musculus protein tyrosine phosphatase, non-receptor type 18 (Ptpn18), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA];  [goid 4726] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	HSCF; FLP1; PTP-HSCF; Ptpk1; PTP-K1	HSCF; FLP1; PTP-HSCF; Ptpk1; PTP-K1
Mus musculus	RefSeq	ILMN_214652	ILMN_214652	MDGA2	NM_207010.1	NM_207010.1		320772	46275815	NM_207010.1	Mdga2	NP_996893.1	ILMN_1241332	002810349	S	3233	GCCTGGGTACAAAAGAGCCCTTCAGGTGCTTTTGTGGCTAAAATGATTAC	12	-	67572230-67572279	12qC2	Mus musculus MAM domain containing glycosylphosphatidylinositol anchor 2 (Mdga2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			Mdga2; 9330209L04Rik; 6720489L24Rik; Mamdc1	Mdga2; 9330209L04Rik; 6720489L24Rik; Mamdc1
Mus musculus	RefSeq	ILMN_214652	ILMN_214652	MDGA2	NM_207010.1	NM_207010.1		320772	46275815	NM_207010.1	Mdga2	NP_996893.1	ILMN_2722424	000290280	S	673	GGAGACGTGGTCAGGAGGTATTACTACAAGGATCTGACAAGGGAGTGGAG	12	-	67823943-67823992	12qC2	Mus musculus MAM domain containing glycosylphosphatidylinositol anchor 2 (Mdga2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			Mdga2; 9330209L04Rik; 6720489L24Rik; Mamdc1	Mdga2; 9330209L04Rik; 6720489L24Rik; Mamdc1
Mus musculus	RefSeq	ILMN_214652	ILMN_214652	MDGA2	NM_207010.1	NM_207010.1		320772	46275815	NM_207010.1	Mdga2	NP_996893.1	ILMN_2847711	002630010	S	2896	GTGCAAAACAAGACCTACCAACTAAGAATTCCGTGGATGGTGCTGTTGGG	12	-	67572567-67572590:67574189-67574214	12qC2	Mus musculus MAM domain containing glycosylphosphatidylinositol anchor 2 (Mdga2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			Mdga2; 9330209L04Rik; 6720489L24Rik; Mamdc1	Mdga2; 9330209L04Rik; 6720489L24Rik; Mamdc1
Mus musculus	RefSeq	ILMN_221505	ILMN_221505	FGF10	NM_008002.3	NM_008002.3		14165	34328438	NM_008002.3	Fgf10	NP_032028.1	ILMN_2736497	000130577	S	3605	GGCACTGCTCCACCATGCTGAAGTGTGTTAGCCACGGGTACAGAGCATAT	13	+	119580748-119580797	13qD2.3	Mus musculus fibroblast growth factor 10 (Fgf10), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence NAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence NAS]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that activates or increases the rate or extent of urothelial cell proliferation [goid 50677] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport [goid 48260] [evidence NAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence NAS]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30177] [evidence IMP]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IDA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IGI]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IGI]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	Interacting selectively with the fibroblast growth factor receptor (FGFR) [goid 5104] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal [goid 42056] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	FGF-10; BB213776	FGF-10; BB213776
Mus musculus	RefSeq	ILMN_221505	ILMN_221505	FGF10	NM_008002.3	NM_008002.3		14165	34328438	NM_008002.3	Fgf10	NP_032028.1	ILMN_2982771	002600286	S	3627	AGTGTGTTAGCCACGGGTACAGAGCATATGACTGTTGACATCAGACTCCT	13	+	119580770-119580819	13qD2.3	Mus musculus fibroblast growth factor 10 (Fgf10), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence NAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence NAS]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that activates or increases the rate or extent of urothelial cell proliferation [goid 50677] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport [goid 48260] [evidence NAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence NAS]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30177] [evidence IMP]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IDA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IGI]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IGI]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	Interacting selectively with the fibroblast growth factor receptor (FGFR) [goid 5104] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal [goid 42056] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	FGF-10; BB213776	FGF-10; BB213776
Mus musculus	RefSeq	ILMN_221505	ILMN_221505	FGF10	NM_008002.3	NM_008002.3		14165	34328438	NM_008002.3	Fgf10	NP_032028.1	ILMN_1213777	001410292	S	1468	GGGTCATATCATATGCACAACCAAAGGAGCTTTGGGTGTGGCACCATGGA	13	+	119578611-119578660	13qD2.3	Mus musculus fibroblast growth factor 10 (Fgf10), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence NAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence NAS]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that activates or increases the rate or extent of urothelial cell proliferation [goid 50677] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport [goid 48260] [evidence NAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence NAS]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30177] [evidence IMP]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IDA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IGI]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IGI]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	Interacting selectively with the fibroblast growth factor receptor (FGFR) [goid 5104] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal [goid 42056] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	FGF-10; BB213776	FGF-10; BB213776
Mus musculus	RefSeq	ILMN_210452	ILMN_210452	HHEX	NM_008245.3	NM_008245.3		15242	141802813	NM_008245.3	Hhex	NP_032271.1	ILMN_1245731	000450736	S	1370	AGAGCACTTGGCTCCCGGTGTCTGTTCTTACAAGCAAGATAGTTGATAAG	19	+	37514820-37514869	19qC2	Mus musculus hematopoietically expressed homeobox (Hhex), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30177] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Prhx; Prh; Hex; Hhex-rs2	Prhx; Prh; Hex; Hhex-rs2
Mus musculus	Riken	ILMN_203198	ILMN_203198	A930041K01RIK	ri|A930041K01|PX00067L07|AK044773|2713					AK044773	A930041K01Rik		ILMN_2555465	000610767	S	49	TGAGGAAAGGTAGCGCGTGGTCCGCGGGTGAGTGAGGGAGCGAATGAGGG										
Mus musculus	MEEBO	ILMN_196212	ILMN_196212	SCL0002540.1_6	scl0002540.1_6	AK019418.1			12859614	AK019418.1	scl0002540.1_6		ILMN_1254034	006280403	S	7	CGTTGTTAGTCCCAGCCGACGTTTTTGGTGATATTCCAGTTTAGTTTCCC										
Mus musculus	RefSeq	ILMN_201295	ILMN_201295	LOC382385	XM_356477.1	XM_356477.1			38090620	XM_356477.1	LOC382385		ILMN_1223434	003710497	S	1630	ACCAGAGCTGGAGGGATTGGTGGTGCTGGACCTAGCGCTGGAGGCTGTGA										
Mus musculus	Riken	ILMN_207153	ILMN_207153	F730046H10RIK	ri|F730046H10|PL00003L06|AK089528|2406					AK089528	F730046H10Rik		ILMN_1254319	004610445	S	2072	GGCTCCGTGTGAACGGGAGTGCCATCAAGTCGAACAGCATGAGAAGTGAC										
Mus musculus	RefSeq	ILMN_200055	ILMN_200055	LOC383184	XM_356909.1	XM_356909.1			38080078	XM_356909.1	LOC383184		ILMN_1238548	006580367	S	389	ACTGGGCCAACCTCATAGACGGAGTTCCTGCCATGATAACCTCTTACCCC										
Mus musculus	Riken	ILMN_204758	ILMN_204758	B930053E03RIK	ri|B930053E03|PX00164I14|AK047363|2416					AK047363	B930053E03Rik		ILMN_1240090	006370373	S	2220	GGCCATTCACTGGAACATGGTTGACCTCCTAGGGACTGCCTTCAAGAACG										
Mus musculus	MEEBO	ILMN_195966	ILMN_195966	SMC5L1	scl00226026.1_52				24497432	NM_153808	Smc5l1		ILMN_2695149	002190176	S	3246	TGCTGGAGCCAAACCGATGGAATTTAAAGGCTTTTCAAAGGCGTCGGCGA										
Mus musculus	MEEBO	ILMN_195966	ILMN_195966	SMC5L1	scl00226026.1_52				24497432	NM_153808	Smc5l1		ILMN_2695150	002340639	S	3247	GCTGGAGCCAAACCGATGGAATTTAAAGGCTTTTCAAAGGCGTCGGCGAA										
Mus musculus	RefSeq	ILMN_213266	ILMN_213266	GUCA2A	NM_008190.1	NM_008190.1		14915	6680132	NM_008190.1	Guca2a	NP_032216.1	ILMN_2635395	003610554	S	365	TGCTAGAGTGACATCGCTTGCCTTTCTCTCAGCCCATGTGGAAGCCCCTC	4	+	119311875-119311880:119311881-119311924	4qD2.1	Mus musculus guanylate cyclase activator 2a (guanylin) (Guca2a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Increases the activity of an enzyme [goid 8047] [evidence IEA]	Guca2	Guca2
Mus musculus	RefSeq	ILMN_223192	ILMN_223192	ARHGEF4	NM_183019.2	NM_183019.2		226970	56699447	NM_183019.2	Arhgef4	NP_898840.2	ILMN_2760548	006860544	S	2602	GAGCCTACAGGACTCAGAAGCATGGAGTCACTCTTGCGCTGCATCTTCTC	1	+	34869487-34869536	1qB	Mus musculus Rho guanine nucleotide exchange factor (GEF) 4 (Arhgef4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	9330140K16Rik; Asef	9330140K16Rik; Asef
Mus musculus	RefSeq	ILMN_194200	ILMN_245100	D230010M03RIK	NM_178724.2	NM_178724.2		241547	31341300	NM_178724.2	D230010M03Rik	NP_848839.1	ILMN_1226081	000010754	S	3332	GCTCTTAGGCTAGTGCTGTTAAGCAGCTTTGGGTAAGATCTCCCAGAATT	2	+	91515915-91515964	2qE1	Mus musculus RIKEN cDNA D230010M03 gene (D230010M03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222240	ILMN_222240	CCNL1	NM_019937.3	NM_019937.3		56706	90403610	NM_019937.3	Ccnl1	NP_064321.2	ILMN_1228850	005700424	S	1494	CAAATAGACACGGTCATAAGAGGAAAAAGTCTCGGTCTCGATCTCAGAGC	3	-	65750674-65750723	3qE1	Mus musculus cyclin L1 (Ccnl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation [goid 8023] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ccnl; 2610030E23Rik; ania-6a; AU018493	Ccnl; 2610030E23Rik; ania-6a; AU018493
Mus musculus	RefSeq	ILMN_210997	ILMN_210997	PALM	NM_023128.2	NM_023128.2		18483	31560272	NM_023128.2	Palm	NP_075617.2	ILMN_2815626	006380349	S	2313	GGAGAGGCGCACTTTCCTGAGGGTGAGCTATGGCCGTGGTCATGGCACCC	10	+	79223831-79223880	10qC1	Mus musculus paralemmin (Palm), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [evidence IDA]	Interacting selectively with a D3 dopamine receptor [goid 31750] [evidence IPI]	mKIAA0270	mKIAA0270
Mus musculus	RefSeq	ILMN_210997	ILMN_210997	PALM	NM_023128.2	NM_023128.2		18483	31560272	NM_023128.2	Palm	NP_075617.2	ILMN_1224802	000380242	S	1937	GAAGTCAGTGGGTATGTCTGCCAGCGCCACAAAACCTAGCATATCCAGGC	10	+	79223455-79223504	10qC1	Mus musculus paralemmin (Palm), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [evidence IDA]	Interacting selectively with a D3 dopamine receptor [goid 31750] [evidence IPI]	mKIAA0270	mKIAA0270
Mus musculus	RefSeq	ILMN_223087	ILMN_223087	C130053K05RIK	NM_175467.1	NM_175467.1		228677	28202040	NM_175467.1	C130053K05Rik	NP_780676.1	ILMN_2814660	001780300	S	2547	TTCTAAAGAGGAGGGAGAAAAGCAATCACAAGCCAGTTTTGGACCTAGAC	2	+	139328903-139328952	2qF3	Mus musculus RIKEN cDNA C130053K05 gene (C130053K05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209138	ILMN_209138	CALML3	NM_027416.2	NM_027416.2		70405	142347500	NM_027416.2	Calml3	NP_081692.1	ILMN_2592901	001090482	S	1101	TTTGGCTGAAGACTGCGTCTGTTGGATTTGGAAAGCATCAGGGCGTGGGG	13	-	3802412-3802461	13qA1	Mus musculus calmodulin-like 3 (Calml3), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI326174; 2310068O22Rik	AI326174; 2310068O22Rik
Mus musculus	Riken	ILMN_206455	ILMN_206455	D130079K20RIK	ri|D130079K20|PX00186J14|AK084050|3254					AK084050	D130079K20Rik		ILMN_1245999	002100326	S	2677	GGGATGCAGGAAGTGGTCAGAGCTCTGCAGAGTCACAGGATGGATTAGAG										
Mus musculus	RefSeq	ILMN_221289	ILMN_315162	LOC100044862	XM_001473206.1	XM_001473206.1		100044862	149266246	XM_001473206.1	LOC100044862	XP_001473256.1	ILMN_2733542	000990672	S	3018	CACGTAGGGATGAGAAGGAAAAGACCGACCCAGAGCTCCACACTAAAGGC					PREDICTED: Mus musculus similar to Fbxl3 protein (LOC100044862), mRNA.					
Mus musculus	Riken	ILMN_202019	ILMN_202019	FBXW2	ri|1500001O16|ZX00050A11|AK005103|1831					AK005103	Fbxw2		ILMN_1243898	003290066	S	1641	ACAGACCCCATCCATTAGAGTAATACCACACAGCCTAAGGACACCACAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]			
Mus musculus	RefSeq	ILMN_217152	ILMN_236168	SSSCA1	NM_020491.4	NM_020491.4		56390	60687516	NM_020491.4	Sssca1	NP_065237.3	ILMN_2691493	002680196	S	596	CCCTAGGCAGCCTGAAACAGCTGGATCACTGAGACCTCTATCCTGATCCC	19	-	5730350-5730368:5730369-5730399	19qA	Mus musculus Sjogren's syndrome/scleroderma autoantigen 1 homolog (human) (Sssca1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1500016H19Rik; C184L	1500016H19Rik; C184L
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_1235836	001510564	S	2083	GCCTGTAAAGGAGCGCCTAAGACCTGTGCTTTACTAGAAAAGTTTTCCGA	4	-	9402561-9402610	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_2741446	002260095	S	1721	ACCCTGGCACGGATGATGGCCGGTTTTACTTCCACTTGGGGGATGCCATG	4	-	9441756-9441805	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_2610810	006900180	S	2326	GACTCTTTTGAGCACGAGGTTTGGCAGGATGCCTCGTCTTTCCGGCTGAT	4	-	9380508-9380557	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_2606990	003400026	S	767	CACAGCCGGAGGTTGAGGACTTCCTCACAGTGACCGACAGTGATGACAGA	4	-	9531696-9531745	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_1233759	007380670	S	6382	GACAGTCCATACTGGTGATGCTTGCTACTCACCTGAATCAGAGCATGTGA	4	-	9376452-9376501	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_2609988	006510037	S	1520	GTGATACTACCTTAAAAAACGACCTTGGCGTAGGATACCTCTTGTTGGGA	4	-	9457065-9457114	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_2610012	004560041	S	1410	TACAGACCTGGTGAAGCTGAGCTTGAAGCGAAGGTCGGAACGGCAGCAGT	4	-	9459067-9459116	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_2594584	004220152	S	1646	ACGGCTTCATCCTGAAGGCACAGAACAAGATATCTGAGAGCATTCCCTAC	4	-	9444788-9444837	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_2708404	007610739	S	1813	GGGCACAAGAGAGGACATTTTGCCTCTGTCTGGCAGCGTTCCCTCTACAA	4	-	9435840-9435889	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_2671843	000580086	S	2219	GCAGGCTCCGAATGCATCTGGGGTTAGTGATCCCCAAGGAAGGCTGCAAG	4	-	9402067-9402116	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_2601196	002070240	S	1159	AAACTTCTGAACAAATTTGATAAGACAATTAAGGCTGAGCTGGATGCTGC	4	-	9469390-9469439	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_209310	ILMN_209310	ASPH	NM_023066.2	NM_023066.2		65973	125628658	NM_023066.2	Asph	NP_075553.2	ILMN_2776700	007210110	S	1246	GTGAACGCATTTGAAGAACTGGTTCGAAAGTACCCTCAGAGCCCACGAGC	4	-	9464844-9464893	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_216251	ILMN_216251	MCPT6	NM_010781.2	NM_010781.2		17229	72534649	NM_010781.2	Mcpt6	NP_034911.2	ILMN_3161036	005670441	S	874	CGTGCTGTCTTTAACTCACTGCTTCCTGGTCAGGTGGAACCCTTGCCTTC	17	+	25095478-25095527	17qA3.3	Mus musculus mast cell protease 6 (Mcpt6), mRNA.				AV011504; MMCP-6; Mcp-6	AV011504; MMCP-6; Mcp-6
Mus musculus	RefSeq	ILMN_220671	ILMN_220671	4930504H06RIK	XM_126856.3	XM_126856.3		75040	94392530	XM_126856.3	4930504H06Rik	XP_126856.1	ILMN_2725119	001190646	S	620	GTGGTCAATGTTTTAGTGGCATTGTAGCTCAAGATAATAAATGGTCCTAC	12	+	34086079-34086094:34086095-34086128	12qA3	PREDICTED: Mus musculus RIKEN cDNA 4930504H06 gene (4930504H06Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218183	ILMN_319889	MTAG2	XR_035718.1	XR_035718.1		50994	149257112	XR_035718.1	Mtag2		ILMN_2692688	006520497	S	505	TGGGACACCGGCCAGCCTCCGCCTTCAGAGCTGCGCGAGCGTTGTCTATC				7qB4	PREDICTED: Mus musculus metastasis associated gene 2 (Mtag2), misc RNA.					
Mus musculus	Riken	ILMN_204251	ILMN_204251	A830096K14RIK	ri|A830096K14|PX00156H22|AK044163|800					AK044163	A830096K14Rik		ILMN_1217668	004180154	S	414	CCAGCTGCCGTTTGCCTGCTCGGAGAGCGCTTAGGAGGACTACATTAGTT										
Mus musculus	RefSeq	ILMN_219294	ILMN_219294	KCNA4	NM_021275.3	NM_021275.3		16492	142358254	NM_021275.3	Kcna4	NP_067250.2	ILMN_2706896	004880114	S	4603	ATGCACCACGAACAACTGTAGCACCATAAAATACAGCTCAGAACACTCAG	2	+	107138485-107138534	2qE3	Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 4 (Kcna4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC124445; Kv1.4	MGC124445; Kv1.4
Mus musculus	MEEBO	ILMN_211034	ILMN_211034	9630036L12RIK	scl0002965.1_19	XM_288123.2			38087198	XM_288123.2	9630036L12Rik		ILMN_2611783	006650681	S	1173	GGGCGCATTGACATGGATAAATATGAGGTAATTGACATCGAAGATGGCAG										
Mus musculus	RefSeq	ILMN_212046	ILMN_250875	OIP5	NM_001042653.1	NM_001042653.1		70645	111120324	NM_001042653.1	Oip5	NP_001036118.1	ILMN_2762410	003830017	S	839	TTTCACTACTAATAATTAATTAGCATGCAGTGTCCCTTGTGTCCACTGTT	2	-	119435936-119435985	2qE5	Mus musculus Opa interacting protein 5 (Oip5), mRNA.	A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [evidence ISO]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence ISO]; A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure [goid 10369] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Lint-25; 5730547N13Rik	Lint-25; 5730547N13Rik
Mus musculus	RefSeq	ILMN_212046	ILMN_250875	OIP5	NM_001042653.1	NM_001042653.1		70645	111120324	NM_001042653.1	Oip5	NP_001036118.1	ILMN_1220637	000380661	S	447	GGGACTCCTGTTGGTTTCCATTTATATTCTACCCATGCTGCTATGGCTGC	2	-	119441309-119441358	2qE5	Mus musculus Opa interacting protein 5 (Oip5), mRNA.	A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [evidence ISO]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence ISO]; A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure [goid 10369] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Lint-25; 5730547N13Rik	Lint-25; 5730547N13Rik
Mus musculus	RefSeq	ILMN_210992	ILMN_248485	BC018507	XM_909721.3	XM_909721.3		218333	149264496	XM_909721.3	BC018507	XP_914814.2	ILMN_1230422	005550630	S	7457	CAGTGCTATCTATGATGTGTCTCACATTGGATGATATTCCACTTTCGGAA				13qC1	PREDICTED: Mus musculus cDNA sequence BC018507, transcript variant 5 (BC018507), mRNA.					
Mus musculus	Riken	ILMN_203794	ILMN_203794	CPX2-PENDING	ri|A230070K15|PX00129G07|AK038874|2132					AK038874	Cpx2-pending		ILMN_1234506	006860441	S	1904	CACACAAGACAGAGTTCTGGTGACCTGTGGCCATTTCACTTTTGGTGATG										
Mus musculus	RefSeq	ILMN_224438	ILMN_224438	NECAP2	NM_025383.2	NM_025383.2		66147	31560260	NM_025383.2	Necap2	NP_079659.1	ILMN_2796400	002750333	S	1593	CATAGCTGGCCCACTTGACGGTCCCTGGTGGCTTCTGGAGGGAAGCTGTA	4	-	140622667-140622716	4qD3	Mus musculus NECAP endocytosis associated 2 (Necap2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A clathrin coat found on a vesicle [goid 30125] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		RP23-183L1.7; C78898; AA409105; 1110005F07Rik	RP23-183L1.7; C78898; AA409105; 1110005F07Rik
Mus musculus	RefSeq	ILMN_242113	ILMN_242113	CAMK2G	NM_001039138.1	NM_001039138.1		12325	85362741	NM_001039138.1	Camk2g	NP_001034227.1	ILMN_3135323	001820133	A	3159	TCAGGAGGCACAGGAGCTGGGAAAAGAGAACTACAGAGTATGGAGCCAGC	14	-	21554558-21554607	14qA3	Mus musculus calcium/calmodulin-dependent protein kinase II gamma (Camk2g), transcript variant 2, mRNA.		Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	5930429P18Rik; Camkg	5930429P18Rik; Camkg
Mus musculus	RefSeq	ILMN_201052	ILMN_201052	LOC381968	XM_356004.1	XM_356004.1			38088213	XM_356004.1	LOC381968		ILMN_2540910	001010273	S	80	CTGTAATACAGTGGTGTGAGGAACCTTCCAAGGTTTCGGCCGAGTCCAGC										
Mus musculus	RefSeq	ILMN_198920	ILMN_261240	GM846	NM_001033421.2	NM_001033421.2		330921	142352358	NM_001033421.2	Gm846	NP_001028593.1	ILMN_2533396	004040291	S	596	GCAGGGCATTTTGATCTGTGGACAATACTGCCCATCATGAGTAGGTCCAG	9	+	35478855-35478904	9qA4	Mus musculus gene model 846, (NCBI) (Gm846), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_213260	ILMN_213260	GSTO1	NM_010362.2	NM_010362.2		14873	133892764	NM_010362.2	Gsto1	NP_034492.1	ILMN_1254523	001010435	S	596	GGGGATTCTCCTTCTATGGTTGATTATCTTACTTGGCCTTGGTTTCAGCG	19	+	47937899-47937948	19qD1	Mus musculus glutathione S-transferase omega 1 (Gsto1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]	GSTX; AU018802; p28; AA407097; AI194287	GSTX; AU018802; p28; AA407097; AI194287
Mus musculus	RefSeq	ILMN_209994	ILMN_254983	OLFR807	NM_146929.1	NM_146929.1		258931	22129050	NM_146929.1	Olfr807	NP_667140.1	ILMN_1249712	006220730	S	554	CCTGCAATGATACAAGGTTCATGCAACTGCTCAACTTCATTTTTGCCATC	10	-	129191901-129191950	10qD3	Mus musculus olfactory receptor 807 (Olfr807), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR117-1	MOR117-1
Mus musculus	RefSeq	ILMN_230853	ILMN_230853	PSG22	NM_001004152.1	NM_001004152.1		243862	52138531	NM_001004152.1	Psg22	NP_001004152.1	ILMN_3078396	002710280	I	125	GGACAGCAGAGTCCAGGTGCCTTGCAGGAGCAAAGTTCTTCTCCTCTGAG	7	+	19303561-19303610	7qA3	Mus musculus pregnancy-specific glycoprotein 22 (Psg22), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		AA408604; MGC91102	AA408604; MGC91102
Mus musculus	RefSeq	ILMN_230853	ILMN_230853	PSG22	NM_001004152.1	NM_001004152.1		243862	52138531	NM_001004152.1	Psg22	NP_001004152.1	ILMN_3157677	003060484	A	1362	TCATGAGAGTCACGGACAGCACAGTTCGAATACAGGGCTCAGTGGTCTTC	7	+	19312086-19312135	7qA3	Mus musculus pregnancy-specific glycoprotein 22 (Psg22), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		AA408604; MGC91102	AA408604; MGC91102
Mus musculus	RefSeq	ILMN_213500	ILMN_224439	0610010K06RIK	NM_027861.2	NM_027861.2		71678	124244090	NM_027861.2	0610010K06Rik	NP_082137.1	ILMN_2637698	001500400	S	3168	GGCCATGTTCACGTGATCGCATGAGCAGTCTTGTTGATTGTAAAGCTAAC	1|NT_165754.2	-	249928-249977		Mus musculus RIKEN cDNA 0610010K06 gene (0610010K06Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_217278	ILMN_258972	APOL2	XM_911496.3	XM_911496.3		239552	149266969	XM_911496.3	Apol2	XP_916589.2	ILMN_1260031	006980240	S	2377	ACACGTTAGAGCACGTTTCAGGATGTGAGATAGGAGAGCATCCGCCCTCC				15qE1	PREDICTED: Mus musculus apolipoprotein L, 2 (Apol2), mRNA.					
Mus musculus	RefSeq	ILMN_218149	ILMN_218149	SERPINA6	NM_007618.2	NM_007618.2		12401	118131216	NM_007618.2	Serpina6	NP_031644.1	ILMN_2921383	006660403	S	1172	GGCCCTTCATCTTCCTGGCCTTTGACAAGTACACATGGAGCAGCCTGATG	12	-	104885082-104885131	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 6 (Serpina6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IMP]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 8211] [evidence IMP]	Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IDA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IMP]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	AV104445; AI265318; Cbg	AV104445; AI265318; Cbg
Mus musculus	Riken	ILMN_202654	ILMN_202654	MRPS5	ri|1620401I16|PX00101H22|AK018829|813					AK018829	Mrps5		ILMN_1223017	002030079	S	673	ACTTGCCTTTGTGACAGTGCGAAGGTGGCTTTGTGACGGTGCGAGGGTGG						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224201	ILMN_248953	ACCS	NM_183220.2	NM_183220.2		329470	118130731	NM_183220.2	Accs	NP_899043.1	ILMN_2776485	000630168	S	1763	GGGCTACAGGAGACTGAGTGTGGATGCGCCATTTGTCAGTGGGACTCACG	2	-	93675795-93675844	2qE1	Mus musculus 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) (Accs), mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]	Phacs; RP23-290E9.2; MGC48140	Phacs; RP23-290E9.2; MGC48140
Mus musculus	RefSeq	ILMN_213484	ILMN_213484	FKBP9	NM_012056.1	NM_012056.1		27055	27532951	NM_012056.1	Fkbp9	NP_036186.1	ILMN_1249550	005960070	S	2745	GGCTAGCCCATTCCCACACCATGTGGTAGCTATGCTCCTACTTTATGTCC	6	+	56829106-56829155	6qB3	Mus musculus FK506 binding protein 9 (Fkbp9), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	AW549641; FKBP63; 1810014L23; FKBP60	AW549641; FKBP63; 1810014L23; FKBP60
Mus musculus	RefSeq	ILMN_214296	ILMN_214296	NRP1	NM_008737.1	NM_008737.1		18186	6679133	NM_008737.1	Nrp1	NP_032763.1	ILMN_1237197	000360743	S	3511	GCTGGCACTAGGCGTTATTCAGTGGGCCCTTTTGATGGACATGTGACCTG	8	+	131027133-131027182	8qE2	Mus musculus neuropilin 1 (Nrp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 17154] [evidence IGI];  [goid 17154] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	Npn1; Nrp; NP-1; C530029I03; NPN-1	Npn1; Nrp; NP-1; C530029I03; NPN-1
Mus musculus	RefSeq	ILMN_214296	ILMN_214296	NRP1	NM_008737.1	NM_008737.1		18186	6679133	NM_008737.1	Nrp1	NP_032763.1	ILMN_2669912	006940187	S	3517	ACTAGGCGTTATTCAGTGGGCCCTTTTGATGGACATGTGACCTGTAGCCC	8	+	131027139-131027188	8qE2	Mus musculus neuropilin 1 (Nrp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 17154] [evidence IGI];  [goid 17154] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	Npn1; Nrp; NP-1; C530029I03; NPN-1	Npn1; Nrp; NP-1; C530029I03; NPN-1
Mus musculus	MEEBO	ILMN_190249	ILMN_190249	B230343A10RIK	scl41403.1.1_37						B230343A10Rik		ILMN_2468473	005700446	S	4	CGAAGCATTCCCTTGCAACCCGAGCACATCAGCGAACCCCACGAAAGTGG										
Mus musculus	MEEBO	ILMN_222900	ILMN_222900	LRRC15	scl48583.3_570	XM_358823.1			38080673	XM_358823.1	Lrrc15		ILMN_2756421	005090706	S	5233	GGGAATCTGTCCTTTGCTAGATGCGGCTTGTAACAGATTTGGTGTACAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210035	ILMN_210035	0610011L14RIK	NM_026661.3	NM_026661.3		68295	142365065	NM_026661.3	0610011L14Rik	NP_080937.2	ILMN_2601546	001710201	S	3229	CATTCACTAACAGACTGTGTTGGGGTTAGGAGGCCACACGACATGCAGGC	2	+	156394513-156394562	2qH1	Mus musculus RIKEN cDNA 0610011L14 gene (0610011L14Rik), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_208738	ILMN_208738	COX6C	NM_053071.2	NM_053071.2		12864	83816957	NM_053071.2	Cox6c	NP_444301.1	ILMN_2589039	005490050	S	328	GAGATGAGGAAGGCTGGTATCTTTCAGAGTGCCAAGTGATTTCAGAATGC	15	-	35865043-35865054:35865055-35865092	15qB3.1	Mus musculus cytochrome c oxidase, subunit VIc (Cox6c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185678	ILMN_252085	DMXL1	NM_001081371.1	NM_001081371.1		240283	124487030	NM_001081371.1	Dmxl1	NP_001074840.1	ILMN_1252993	005890674	S	4561	GCTTACCAGGGCTCACCAGGATGGAGCAGATGTCTTTGATGGCCTTAGCC	18	+	50038915-50038964	18qD1	Mus musculus Dmx-like 1 (Dmxl1), mRNA.				C630007L23Rik; D030030C22	C630007L23Rik; D030030C22
Mus musculus	RefSeq	ILMN_185678	ILMN_252085	DMXL1	NM_001081371.1	NM_001081371.1		240283	124487030	NM_001081371.1	Dmxl1	NP_001074840.1	ILMN_2429071	000990192	S	11603	GCCTGAAAGTGGCAATGGTATGATTAAAAGGCTAGAAACCTAGGCAAACA	18	+	50124499-50124548	18qD1	Mus musculus Dmx-like 1 (Dmxl1), mRNA.				C630007L23Rik; D030030C22	C630007L23Rik; D030030C22
Mus musculus	RefSeq	ILMN_196663	ILMN_252085	DMXL1	NM_001081371.1	NM_001081371.1		240283	124487030	NM_001081371.1	Dmxl1	NP_001074840.1	ILMN_1220838	003140195	S	9497	AGAGGTGCCGACCAAGAGAACACTCACCACTGAACTCTCCACCTTCTCAC	18	+	50122393-50122442	18qD1	Mus musculus Dmx-like 1 (Dmxl1), mRNA.				C630007L23Rik; D030030C22	C630007L23Rik; D030030C22
Mus musculus	RefSeq	ILMN_212528	ILMN_212528	HEMGN	NM_053149.2	NM_053149.2		93966	118131169	NM_053149.2	Hemgn	NP_444379.1	ILMN_1239447	006450576	S	1528	CCAAGGGCAGGACGCTGATGCACAGGACAGCGAGAACGCTGGTGCTTTCT	4	-	46408719-46408768	4qB1	Mus musculus hemogen (Hemgn), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Hgn; AI317176; 4921524M03Rik; mNDR; EDAG	Hgn; AI317176; 4921524M03Rik; mNDR; EDAG
Mus musculus	Riken	ILMN_204911	ILMN_204911	C130060G18RIK	ri|C130060G18|PX00170P17|AK048432|3645					AK048432	C130060G18Rik		ILMN_1240389	004760400	S	3478	TGCGCAGTGGTCTCTTTGTTCGAGCGCTGGTTTCTTTGCTTGCCGTTCCT										
Mus musculus	Riken	ILMN_206153	ILMN_206153	C230094A19RIK	ri|C230094A19|PX00177F22|AK082711|3329					AK082711	C230094A19Rik		ILMN_2577965	002030239	S	2384	CCTTCGTGGCACTGAATGGTAAGGACAATGTTACTGTCACAATTTCACGT										
Mus musculus	MEEBO	ILMN_191517	ILMN_191517	4833438C02RIK	scl52410.2_145						4833438C02Rik		ILMN_1237342	004900470	S	13	GGAAAATTGCCAGCGGTGTGCTTTGCATGGGTGAGGGCCAGCTGTTACCA										
Mus musculus	RefSeq	ILMN_199440	ILMN_199440	OLFR1252	NM_207568.1	NM_207568.1		404331	46430587	NM_207568.1	Olfr1252	NP_997451.1	ILMN_2763675	000580390	S	611	TGTCTATAGTGGTCTTTGTCCTCCTCCTTGTCTCTTATGGAATTATTTTA	2	-	89561606-89561655	2qE1	Mus musculus olfactory receptor 1252 (Olfr1252), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	MEEBO	ILMN_190905	ILMN_190905	OSBP	scl53349.15_2				51771513	XM_148904	Osbp		ILMN_2775438	007400746	S	334	AAGGCCAGCTCCGAAGTAGAGCGTCAGCTCGGGTGACAGCCTTAGAACTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]			
Mus musculus	RefSeq	ILMN_228897	ILMN_228897	RLTPR	NM_001033320.2	NM_001033320.2		234695	118131122	NM_001033320.2	Rltpr	NP_001028492.1	ILMN_2891274	002350551	S	2242	AGACATCCTGAGTCTCCCAGAGGACCCCTGCTTGGGCCCTAGGAATGAAG	8	+	108221289-108221338	8qD3	Mus musculus RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing (Rltpr), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm585; CG1399-PB	Gm585; CG1399-PB
Mus musculus	RefSeq	ILMN_211414	ILMN_323373	SRBD1	XM_001479682.1	XM_001479682.1		78586	149269425	XM_001479682.1	Srbd1	XP_001479732.1	ILMN_1231534	001500202	S	3677	GACCATCAACGGAATCATTTTAATGTGTTCCTCAGAACGTATGTATTGAC				17qE4	PREDICTED: Mus musculus S1 RNA binding domain 1 (Srbd1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215783	ILMN_323373	SRBD1	XM_001479682.1	XM_001479682.1		78586	149269425	XM_001479682.1	Srbd1	XP_001479732.1	ILMN_2663525	004210091	S	351	CAGCATTTGGGAACCTCAGAAGAAAGTTCCCAGAAATCGTAGACAGCCTG				17qE4	PREDICTED: Mus musculus S1 RNA binding domain 1 (Srbd1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]		
Mus musculus	Riken	ILMN_203679	ILMN_203679	9530062G19RIK	ri|9530062G19|PX00113D21|AK035533|2358					AK035533	9530062G19Rik		ILMN_1250360	006480274	S	2056	GTGGTGCAGCCCTTCATTTTAGCACTCAGGAGGAAGAGTTTGAGGCCTGG										
Mus musculus	MEEBO	ILMN_195550	ILMN_195550	2610528H13RIK	scl46161.10_342				22164767	NM_145944	2610528H13Rik		ILMN_1212831	002000097	S	2991	GACCAGCTAACATACCTCAAACAAGAAGGTGTCTTTTAAAATATAGGTGG										
Mus musculus	RefSeq	ILMN_222378	ILMN_222378	PPAPDC3	NM_145521.2	NM_145521.2		227721	31981805	NM_145521.2	Ppapdc3	NP_663496.1	ILMN_2904723	005910446	S	1554	GACATTACTATTAGCCCACCAGGAACCTATTGAATCTGGGAAGCTGCTGC	2	+	31932559-31932608	2qB	Mus musculus phosphatidic acid phosphatase type 2 domain containing 3 (Ppapdc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	D830019K17Rik	D830019K17Rik
Mus musculus	Riken	ILMN_202890	ILMN_202890	8430403J19RIK	ri|8430403J19|PX00024K16|AK033358|2560					AK033358	8430403J19Rik		ILMN_1217458	004560747	S	2201	GAAGTGTCCGGTTCCTGGCCGGTGTGTGCTTCTTTGATAATGGCGATGCC										
Mus musculus	RefSeq	ILMN_212279	ILMN_212279	OLFR984	NM_146608.1	NM_146608.1		258601	33239011	NM_146608.1	Olfr984	NP_666819.1	ILMN_1256542	000010605	S	771	CTATGCAAGACCTTTTAGGACATTCCCCATGGACAAGGCAGTTTCTGTGC	9	-	39908253-39908302	9qA5.1	Mus musculus olfactory receptor 984 (Olfr984), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR239-6	MOR239-6
Mus musculus	Riken	ILMN_205262	ILMN_205262	E330011I20RIK	ri|E330011I20|PX00211P04|AK054295|2454					AK054295	E330011I20Rik		ILMN_1244530	006130142	S	2143	GAGAGACCTATGGGGCCATCAGTGTAAGTGACTCCAAACTGCAGTGCCGG										
Mus musculus	RefSeq	ILMN_216317	ILMN_216317	B3GAT2	NM_172124.2	NM_172124.2		280645	46909608	NM_172124.2	B3gat2	NP_742122.2	ILMN_2669708	004920474	S	1778	CGATGGACGGCCGTTTCGACAGCTACCTGGATGCTACAAAATGTGTTGTC	1	+	23852120-23852169	1qA5	Mus musculus beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) (B3gat2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence TAS]; Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 15018] [evidence IEA]	GlcAT-S; KIAA1963; mKIAA1963; C130037I06	GlcAT-S; KIAA1963; mKIAA1963; C130037I06
Mus musculus	RefSeq	ILMN_209516	ILMN_216317	B3GAT2	NM_172124.2	NM_172124.2		280645	46909608	NM_172124.2	B3gat2	NP_742122.2	ILMN_2596534	006250168	S	2861	CCCATTTATTCATGTACATAACGTATTTTTTCTTTCCCCCATTTGCTCAC	1	+	23853203-23853252	1qA5	Mus musculus beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) (B3gat2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence TAS]; Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 15018] [evidence IEA]	GlcAT-S; KIAA1963; mKIAA1963; C130037I06	GlcAT-S; KIAA1963; mKIAA1963; C130037I06
Mus musculus	RefSeq	ILMN_197150	ILMN_197150	LOC227078	XM_136604.2	XM_136604.2			38074317	XM_136604.2	LOC227078		ILMN_2527093	000780541	S	425	ACGTGGATGCTAGGAATGTATGGCGATTGCCATGGCAACAGGTGCACGGG										
Mus musculus	RefSeq	ILMN_212409	ILMN_212409	PPP1R3B	NM_177741.3	NM_177741.3		244416	51036623	NM_177741.3	Ppp1r3b	NP_808409.1	ILMN_2639972	005080634	S	3784	CGGGATCGTCCAGAGTCACTCAAAGACATTTCTCTTGCTGAGGTTCTGTG	8	+	36450756-36450805	8qA4	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 3B (Ppp1r3b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	GL; 6430576E21; AW821953	GL; 6430576E21; AW821953
Mus musculus	RefSeq	ILMN_219694	ILMN_219694	CMPK	NM_025647.2	NM_025647.2		66588	31981245	NM_025647.2	Cmpk	NP_079923.2	ILMN_2840818	006580626	S	1297	GTGCATAGTCTTTGCTTCCAAGGTTTGAGTCAGGGCACGGGGCTTCAGAG	4	-	114633667-114633716	4qD1	Mus musculus cytidylate kinase (Cmpk), mRNA.				UMP-CMPk; 0610011D08Rik	UMP-CMPk; 0610011D08Rik
Mus musculus	RefSeq	ILMN_199673	ILMN_199673	LOC382863	XM_356715.1	XM_356715.1			38075945	XM_356715.1	LOC382863		ILMN_2536078	000110438	S	14	AGGTGTTCCAGGATCCCATTGAGCAGCTAGAAGAAGAGTCATGGCTGAGC										
Mus musculus	MEEBO	ILMN_188301	ILMN_188301	SCN3A	scl4463.1.1_238				51706171	XM_141275	Scn3a		ILMN_2451506	004540307	S	11	GAACCCCATTTCTATGCATTGCGTCCACGTAGATAATTGTTGAGGAAGTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198511	ILMN_198511	LOC208428	XM_141608.3	XM_141608.3			38085918	XM_141608.3	LOC208428		ILMN_2531944	002000553	S	55	GAAGGGACTAAAAAGCCCCTGACCCATGGGGAAATGGCAGTCTCCAACCC										
Mus musculus	MEEBO	ILMN_219337	ILMN_219337	OLFR609	scl30931.1.238_182	XM_145791.1			20839199	XM_145791.1	Olfr609		ILMN_2707389	006220193	S	524	GATTGGCCTTTCTATGATCCACCGATTTGGCAAGTGGGCTTCCCCCTGCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196756	ILMN_196756	KLRA16	NM_013794.4	NM_013794.4		27424	141803373	NM_013794.4	Klra16	NP_038822.3	ILMN_1229795	003310072	S	582	ACCATGGAGTGGATGTAAACAGACCTGCCAGAGTTCCGGCTTATCCCTTC					Mus musculus killer cell lectin-like receptor, subfamily A, member 16 (Klra16), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ly-49P; Klra24; Ly49P; Ly49x	Ly-49P; Klra24; Ly49P; Ly49x
Mus musculus	MEEBO	ILMN_192358	ILMN_192358	SCL0003555.1_35	scl0003555.1_35						scl0003555.1_35		ILMN_1229863	001050685	S	1	CCCAGGGTATATTGTGTAGATGTTTGGGTTGCCCGTATTTTTGTGTCTAT										
Mus musculus	RefSeq	ILMN_198576	ILMN_233035	LOC673028	XR_004104.1	XR_004104.1		673028	94418468	XR_004104.1	LOC673028		ILMN_1235212	002190070	S	353	GATGTGACCAAAGCCAATAACCTTACAAGGCCTGGCAGATAAAAGAAGGC					PREDICTED: Mus musculus similar to 60S ribosomal protein L23a (LOC673028), mRNA.					
Mus musculus	RefSeq	ILMN_213432	ILMN_213432	GHRH	NM_010285.2	NM_010285.2		14601	110347516	NM_010285.2	Ghrh	NP_034415.1	ILMN_1253853	006480079	S	455	CTGCTTCAGCTCTGACCTTTTCCGTCCTCTGTAAATACAATAAAACCCCC	2	-	157155244-157155293	2qH1	Mus musculus growth hormone releasing hormone (Ghrh), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat [goid 32094] [evidence IDA]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IDA]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IMP]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence ISO]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence ISO]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60124] [evidence ISO]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with a growth hormone-releasing hormone receptor [goid 31770] [evidence IDA]; Interacting selectively with a growth hormone-releasing hormone receptor [goid 31770] [evidence IPI]; Interacting selectively with a growth hormone-releasing hormone receptor [goid 31770] [evidence ISO]	Ghrf	Ghrf
Mus musculus	RefSeq	ILMN_219204	ILMN_219204	1700030K09RIK	NM_028170.1	NM_028170.1		72254	39930438	NM_028170.1	1700030K09Rik	NP_082446.1	ILMN_2705655	006980593	S	2271	GCATCTATCCAGAGCAGCCTGCACAGTATCTCTCATCCACAGCTAGAGGA	8	+	74984330-74984379	8qB3.3	Mus musculus RIKEN cDNA 1700030K09 gene (1700030K09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197113	ILMN_260333	LOC672200	XM_991757.1	XM_991757.1		672200	94365779	XM_991757.1	LOC672200	XP_996851.1	ILMN_1224816	002940161	S	3	GAATTGCAGTAGAAAATTTCTCGAGTGGGTCGCGGAAGCCCAGGAGAGCC					PREDICTED: Mus musculus similar to TSPY-like 3 (LOC672200), mRNA.					
Mus musculus	RefSeq	ILMN_223450	ILMN_223450	MAPK1IP1	NM_027115.2	NM_027115.2		69546	113865968	NM_027115.2	Mapk1ip1	NP_081391.1	ILMN_1224936	000670091	S	1029	GCCTCCATAGAATGAATGAAATCCCGGGTGGCTCCCCTTCCGATTCGTCC	7	-	146027842-146027891	7qF4	Mus musculus mitogen-activated protein kinase 1 interacting protein 1 (Mapk1ip1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	AU043776; 2310009E07Rik; MISS	AU043776; 2310009E07Rik; MISS
Mus musculus	RefSeq	ILMN_218856	ILMN_218856	TCL1B2	NM_013775.1	NM_013775.1		27381	7305554	NM_013775.1	Tcl1b2	NP_038803.1	ILMN_2875224	005260168	S	380	ACACAGTGCAACTGATCCTGATGCTGGAGTAAAGGTCTTGATAGCCTGGC	12	+	106392280-106392311:106392312-106392313:106392840-106392855	12qE	Mus musculus T-cell leukemia/lymphoma 1B, 2 (Tcl1b2), mRNA.					
Mus musculus	RefSeq	ILMN_218856	ILMN_218856	TCL1B2	NM_013775.1	NM_013775.1		27381	7305554	NM_013775.1	Tcl1b2	NP_038803.1	ILMN_1255830	004640044	S	515	GTCATGGTCAGACCTACTTTTTACATGATCTACTTTCTATGAGCCTGGCC	12	+	106392941-106392990	12qE	Mus musculus T-cell leukemia/lymphoma 1B, 2 (Tcl1b2), mRNA.					
Mus musculus	RefSeq	ILMN_196660	ILMN_196660	BTNL7-PENDING	XM_111667.4	XM_111667.4			38082225	XM_111667.4	Btnl7-pending		ILMN_2525269	003780551	S	1146	CCACCCCAACCTTGACATCTCCCAGGATTGGCTGAGTGTGACCCTGAAGG										
Mus musculus	RefSeq	ILMN_206748	ILMN_234382	LOC667337	XM_990977.1	XM_990977.1		667337	94383376	XM_990977.1	LOC667337	XP_996071.1	ILMN_1227914	006200368	S	1136	CGGTTTGGAGCAATGTGGTGAGGTGTGACAACAGAAAACAGACAGGGCCG				8qB1.1	PREDICTED: Mus musculus hypothetical LOC667337 (LOC667337), mRNA.					
Mus musculus	MEEBO	ILMN_218135	ILMN_218135	TFDP1	scl021781.11_3	NM_009361.1			6678304	NM_009361.1	Tfdp1		ILMN_2692110	005420224	S	1607	GTTGCTGGGTTTGCCGAGGAAACTGTACTGCGCCCACACCAGTGACAATG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through S phase, the part of the mitotic cell cycle during which DNA synthesis takes place [goid 84] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_201402	ILMN_201402	LOC382153	XM_356249.1	XM_356249.1			38093538	XM_356249.1	LOC382153		ILMN_1237758	006380243	S	791	CAGAAAATGGCCTAGTCTGCCATCATTGGGCAGAGAATCCCTTGGCCTCG										
Mus musculus	RefSeq	ILMN_218222	ILMN_251361	4930579G24RIK	XM_907090.2	XM_907090.2		75939	94370021	XM_907090.2	4930579G24Rik	XP_912183.1	ILMN_2693115	002360646	S	758	AGTTGGGAGTTGAGCGCGGTGTGTCTCCTAAGGCGGGCGATGAGGATTTC				3qE3	PREDICTED: Mus musculus RIKEN cDNA 4930579G24 gene (4930579G24Rik), mRNA.					
Mus musculus	MEEBO	ILMN_187735	ILMN_187735	SCL0002827.1_16	scl0002827.1_16	BC027782.1			24081036	BC027782.1	scl0002827.1_16		ILMN_1256479	001820086	S	12	CTTGCTGGGTCACGGCCTCTGGGAATCTGAGGAGGTGGCTTCCAGAGCTA										
Mus musculus	MEEBO	ILMN_187735	ILMN_187735	SCL0002827.1_16	scl0002827.1_16	BC027782.1			24081036	BC027782.1	scl0002827.1_16		ILMN_2502516	005690672	S	20	TTCAGCTGGAGCCCTTAAAACTTCGAGCGTGGACGCTGAATGGGTTTGTA										
Mus musculus	Riken	ILMN_202661	ILMN_202661	MUT	ri|A430104A05|PX00064F05|AK020761|995					AK020761	Mut		ILMN_1234676	000610546	S	408	AATCCGGACATTGCGGGCGCGCGTCTGATGACGTAAAGACATACGCTCCG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]	Interacting selectively with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 31419] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the reaction: (R)-2-methyl-3-oxopropanoyl-CoA = succinyl-CoA [goid 4494] [evidence IDA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the transfer of a functional group from one position to another within a single molecule [goid 16866] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213110	ILMN_213110	BC004728	NM_174992.3	NM_174992.3		207818	76443688	NM_174992.3	BC004728	NP_778157.2	ILMN_3053655	002360446	I	108	GTGAGCGCGCTGCGCGGAAGCCCGGAGCCCGCACTCGGCCGCCGCGCGCC	15	-	100467129-100467178	15qF1	Mus musculus cDNA sequence BC004728 (BC004728), transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Smagp; MGC7903	Smagp; MGC7903
Mus musculus	RefSeq	ILMN_213110	ILMN_213110	BC004728	NM_174992.3	NM_174992.3		207818	76443688	NM_174992.3	BC004728	NP_778157.2	ILMN_3130403	002690368	A	927	GACGACCAATAGCCCCAGTCAGTGCTATCCAGTCTTTCTGGAGGCAGGAC	15	-	100451928-100451977	15qF1	Mus musculus cDNA sequence BC004728 (BC004728), transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Smagp; MGC7903	Smagp; MGC7903
Mus musculus	RefSeq	ILMN_202255	ILMN_196406	CEP350	XM_129509.9	XM_129509.9		74081	149234348	XM_129509.9	Cep350	XP_129509.7	ILMN_1236479	001050274	S	9675	GCAGGGGAGAATGCTACTTGTGTGACATCTTGCAAATAAATCGAACACTG	1	-	157695667-157695692:157695693-157695716	1qG3	PREDICTED: Mus musculus centrosomal protein 350, transcript variant 1 (Cep350), mRNA.					
Mus musculus	RefSeq	ILMN_196406	ILMN_196406	CEP350	XM_129509.9	XM_129509.9		74081	149234348	XM_129509.9	Cep350	XP_129509.7	ILMN_1222118	000060279	S	9558	GGCACAGTGGGTGAACTATGATGAGGATGAGTTGTGTGTGAAGATGCAGC	1	-	157695784-157695833	1qG3	PREDICTED: Mus musculus centrosomal protein 350, transcript variant 1 (Cep350), mRNA.					
Mus musculus	RefSeq	ILMN_202962	ILMN_196406	CEP350	XM_129509.9	XM_129509.9		74081	149234348	XM_129509.9	Cep350	XP_129509.7	ILMN_1242411	002320646	S	369	ATGCACCGTGGGAGCCGAGGGCGGAGGCGACACTCTCAGGTAAATTGGCA	1	-	157809679-157809690:157819979-157820016	1qG3	PREDICTED: Mus musculus centrosomal protein 350, transcript variant 1 (Cep350), mRNA.					
Mus musculus	MEEBO	ILMN_186771	ILMN_186771	4632428M11RIK	scl29556.6.1_40				31980764	NM_028730	4632428M11Rik		ILMN_2438370	001850112	S	19	CTAGGGAATGGTCAGCCCGACTTTCCACTGTTTGTAAAAAGCTGCAGGGT										
Mus musculus	RefSeq	ILMN_188370	ILMN_188370	UCP3	NM_009464.3	NM_009464.3		22229	133892795	NM_009464.3	Ucp3	NP_033490.1	ILMN_2452102	007000474	S	1470	CAAACAAAATGGTCGGAGGAACCCTTCGGCTTCAGCACAAAGAGGTGACT	7	+	107633963-107634012	7qE3	Mus musculus uncoupling protein 3 (mitochondrial, proton carrier) (Ucp3), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IMP]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of protons from mitochondrial intermembrane space into mitochondrial matrix, dissipating the proton gradient across the mitochondrial inner membrane established by the electron transport chain during the oxidative phosphorylation (proton leak). Proton leak uncouples the processes of electron transport/proton generation and ATP synthesis [goid 17077] [evidence IMP]	AI645527; Slc25a9; UCP-3	AI645527; Slc25a9; UCP-3
Mus musculus	RefSeq	ILMN_188370	ILMN_188370	UCP3	NM_009464.3	NM_009464.3		22229	133892795	NM_009464.3	Ucp3	NP_033490.1	ILMN_1233132	000160309	S	1836	GAGGAAAATGCAGTTTGTAGTGGTAAAGCCATGCACACCTGGACTGCATG	7	+	107634329-107634378	7qE3	Mus musculus uncoupling protein 3 (mitochondrial, proton carrier) (Ucp3), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IMP]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of protons from mitochondrial intermembrane space into mitochondrial matrix, dissipating the proton gradient across the mitochondrial inner membrane established by the electron transport chain during the oxidative phosphorylation (proton leak). Proton leak uncouples the processes of electron transport/proton generation and ATP synthesis [goid 17077] [evidence IMP]	AI645527; Slc25a9; UCP-3	AI645527; Slc25a9; UCP-3
Mus musculus	RefSeq	ILMN_220778	ILMN_224938	CTBP2	NM_009980.4	NM_009980.4		13017	144922610	NM_009980.4	Ctbp2	NP_034110.1	ILMN_2740806	001710112	S	1752	AGCGATGGAAGGGATCATCCCTGGGGGCATCCCCGTGACTCACAACCTCC	7	-	140179939-140179988	7qF3	Mus musculus C-terminal binding protein 2 (Ctbp2), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IPI]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ribeye; D7Ertd45e; AA407280	Ribeye; D7Ertd45e; AA407280
Mus musculus	RefSeq	ILMN_220778	ILMN_224938	CTBP2	NM_009980.4	NM_009980.4		13017	144922610	NM_009980.4	Ctbp2	NP_034110.1	ILMN_1239933	006270692	S	548	GAATGGCCCTTGTGGATAAGCACAAAGTCAAGCGGCAGCGATTGGACAGG	7	-	140217405-140217453:140217454-140217454	7qF3	Mus musculus C-terminal binding protein 2 (Ctbp2), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IPI]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ribeye; D7Ertd45e; AA407280	Ribeye; D7Ertd45e; AA407280
Mus musculus	MEEBO	ILMN_217583	ILMN_217583	SMR1	scl0020599.1_138				14389424	NM_011422	Smr1		ILMN_2685073	007400523	S	378	TTCCTCCTACCGGACCTCCTACCACAGTACAAGCAACTACAATGCCAGCT										
Mus musculus	RefSeq	ILMN_215212	ILMN_215212	SLC22A3	NM_011395.2	NM_011395.2		20519	133892398	NM_011395.2	Slc22a3	NP_035525.1	ILMN_1217683	003800603	S	3431	GCCTTTGGATTGCATTTCAAGTTGGTAGTTCTGTTTCATAACAATAAACG	17	-	12612858-12612907	17qA1	Mus musculus solute carrier family 22 (organic cation transporter), member 3 (Slc22a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement into, out of, within or between cells of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15697] [evidence IDA]; The directed movement of organic cations into, out of, within or between cells. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage [goid 15695] [evidence IDA]; The directed movement of organic cations into, out of, within or between cells. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage [goid 15695] [evidence ISO]; The directed movement into, out of, within or between cells of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15697] [evidence ISO]; The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of, within or between cells [goid 15844] [evidence IMP]; Any process which modulates appetite, the desire or physical craving for food [goid 32098] [evidence IMP]; The directed movement of histamine into a cell, typically presynaptic neurons or glial cells. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans [goid 51615] [evidence IMP]; The directed movement of histamine into, out of, within or between cells. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans [goid 51608] [evidence IMP]; The directed movement of organic cations into, out of, within or between cells. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage [goid 15695] [evidence ISO]	Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Catalysis of the transfer of quaternary ammonium groups from one side of a membrane to the other. Quaternary ammonium groups are any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15651] [evidence IDA]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [evidence ISO]; Catalysis of the transfer of quaternary ammonium groups from one side of a membrane to the other. Quaternary ammonium groups are any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15651] [evidence ISO]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [evidence ISO]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	EMT; Orct3; Oct3; Slca22a3	EMT; Orct3; Oct3; Slca22a3
Mus musculus	RefSeq	ILMN_219159	ILMN_319251	A630052C17RIK	XR_035410.1	XR_035410.1		320757	149261687	XR_035410.1	A630052C17Rik		ILMN_1254003	000270390	S	1416	CTACAACTCCAAAAGGTTGTAGCCCAAATGAGCCCCTGATGTCCTTGATC	11	-	29071355-29071404	11qA3.3	PREDICTED: Mus musculus RIKEN cDNA A630052C17 gene (A630052C17Rik), misc RNA.					
Mus musculus	Riken	ILMN_207350	ILMN_207350	9630032J03RIK	ri|9630032J03|PX00654H17|AK079342|1822					AK079342	9630032J03Rik		ILMN_1244609	004200382	S	1717	GGGATGGCTCACAACTGTCTAACTCCAGTTCCAGAGCATGACACCCCCTT										
Mus musculus	RefSeq	ILMN_191356	ILMN_314525	LOC100047443	XM_001478553.1	XM_001478553.1		100047443	149253768	XM_001478553.1	LOC100047443	XP_001478603.1	ILMN_2594355	002900674	S	1761	GGATGATCAGAGATTAATATTGCCACTCAAATATATGAAACAGCCAAACC					PREDICTED: Mus musculus similar to Gamma-aminobutyric-acid receptor subunit alpha-2 precursor (GABA(A) receptor subunit alpha-2) (LOC100047443), mRNA.					
Mus musculus	RefSeq	ILMN_188569	ILMN_238063	SH3PXD2B	NM_177364.3	NM_177364.3		268396	63055064	NM_177364.3	Sh3pxd2b	NP_796338.2	ILMN_1230423	007150397	S	7344	CCGGTGTCTGGACTTCATGCGTTGGTGTCTGCACTTGAGCTCTTTGTGTC	11	+	32328095-32328144	11qA4	Mus musculus SH3 and PX domains 2B (Sh3pxd2b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	G431001E03Rik; RP23-375M9.7	G431001E03Rik; RP23-375M9.7
Mus musculus	RefSeq	ILMN_222239	ILMN_222239	FKBP3	NM_013902.4	NM_013902.4		30795	146134483	NM_013902.4	Fkbp3	NP_038930.1	ILMN_2746755	003870703	S	347	TACACAAAATCTATTCTAAAAAAGGGAGATAAAACCAACTTTCCTAAAAA				12qC1	Mus musculus FK506 binding protein 3 (Fkbp3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	FKBP25; 25kDa	FKBP25; 25kDa
Mus musculus	RefSeq	ILMN_199996	ILMN_317729	LOC100038949	XM_001471959.1	XM_001471959.1		100038949	149253811	XM_001471959.1	LOC100038949	XP_001472009.1	ILMN_1224506	005290543	S	629	GGTGGAGTTGAACCTGAGTGGTAAAGACGAACAGGAGAAGACCAGCAACC	5	-	26327651-26327700	5qB1	PREDICTED: Mus musculus hypothetical protein LOC100038949 (LOC100038949), mRNA.					
Mus musculus	RefSeq	ILMN_198102	ILMN_198102	LOC224582	XM_139799.3	XM_139799.3		224582	38081839	XM_139799.3	LOC224582	XP_139799.3	ILMN_2530499	001580523	S	1968	TGCCTTCAAGGCCACCTTTCCAGGGAGAATGGTGAGGTGGTTAATGACCT	17	-	20279025-20279074	17qA3.2	PREDICTED: Mus musculus similar to putative pheromone receptor (Go-VN5) (LOC224582), mRNA.					
Mus musculus	RefSeq	ILMN_194676	ILMN_194676	ZFP35	NM_011755.2	NM_011755.2		22694	83423525	NM_011755.2	Zfp35	NP_035885.2	ILMN_2508595	000580168	S	2088	GAAACGAGAAAAAGGAAGAGTGCCTCCCAGGCGGAATCAAAGCAGGTCAG	18	+	24162927-24162976	18qA2	Mus musculus zinc finger protein 35 (Zfp35), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mszf20-1; mszf68; mszf13; mszf28; Zfp-35	mszf20-1; mszf68; mszf13; mszf28; Zfp-35
Mus musculus	RefSeq	ILMN_210198	ILMN_210198	TFAM	NM_009360.2	NM_009360.2		21780	31543858	NM_009360.2	Tfam	NP_033386.1	ILMN_2603182	003120554	S	841	GAAGACGGAGTTGTCATTGGGATTAGGCCCAAGAAACCAGTTAGGTCTCA	10	-	70623804-70623853	10qB5.3	Mus musculus transcription factor A, mitochondrial (Tfam), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a mitochondrial respiratory chain complex [goid 33108] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	Hmgts; mtTFA; tsHMG; AI661103	Hmgts; mtTFA; tsHMG; AI661103
Mus musculus	Riken	ILMN_204310	ILMN_204310	4932418N15RIK	ri|4932418N15|PX00017P19|AK030056|2649					AK030056	4932418N15Rik		ILMN_2563995	003830097	S	2386	TCCCTAGAGACTGCTCATGTGGGCTTATGACCCCTGCTGGGTGGTGCAGA										
Mus musculus	RefSeq	ILMN_188326	ILMN_255452	ATF6	NM_001081304.1	NM_001081304.1		226641	124486810	NM_001081304.1	Atf6	NP_001074773.1	ILMN_2451709	003310113	S	888	TTTCCGTGACTAAACCTGTTCTACAAAGTGCCACCAGAAGTATGGGTTCG	1	-	172764953-172765002	1qH3	Mus musculus activating transcription factor 6 (Atf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	9130025P16Rik; Atf6alpha; 9630036G24; AA789574; ESTM49	9130025P16Rik; Atf6alpha; 9630036G24; AA789574; ESTM49
Mus musculus	RefSeq	ILMN_188326	ILMN_255452	ATF6	NM_001081304.1	NM_001081304.1		226641	124486810	NM_001081304.1	Atf6	NP_001074773.1	ILMN_2454587	004590348	S	7323	GGACCTGTGGCTTGTGGGTGTTTAGATAAAACACCGAGCTTGTTTCTCTG	1	-	172634678-172634727	1qH3	Mus musculus activating transcription factor 6 (Atf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	9130025P16Rik; Atf6alpha; 9630036G24; AA789574; ESTM49	9130025P16Rik; Atf6alpha; 9630036G24; AA789574; ESTM49
Mus musculus	RefSeq	ILMN_247142	ILMN_247142	NET1	NM_019671.2	NM_019671.2		56349	114145476	NM_019671.2	Net1	NP_062645.2	ILMN_3151722	003840553	A	2508	CCCCCTTTGTCTCAACTGGAATGAACAAACACCCGTGGCAGTCTCACTGC	13	-	3882701-3882750	13qA1	Mus musculus neuroepithelial cell transforming gene 1 (Net1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	AU015857; 0610025H04Rik; mNET1; 9530071N24Rik; AI604373; Net1a	AU015857; 0610025H04Rik; mNET1; 9530071N24Rik; AI604373; Net1a
Mus musculus	RefSeq	ILMN_247142	ILMN_247142	NET1	NM_019671.2	NM_019671.2		56349	114145476	NM_019671.2	Net1	NP_062645.2	ILMN_3072945	002750762	I	293	TCGGAGAGGCAGCTCCTTCACATTTTTAACCCCTGGCCCACACTGGGACT	13	-	3912121-3912170	13qA1	Mus musculus neuroepithelial cell transforming gene 1 (Net1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	AU015857; 0610025H04Rik; mNET1; 9530071N24Rik; AI604373; Net1a	AU015857; 0610025H04Rik; mNET1; 9530071N24Rik; AI604373; Net1a
Mus musculus	RefSeq	ILMN_215882	ILMN_215882	MARCH3	NM_177115.2	NM_177115.2		320253	31342831	NM_177115.2	March3	NP_796089.1	ILMN_2939951	000460161	S	1439	CTGTTCAGCAGTCCCAAATGTCCACCTCACCCTGTCCACCGGCAGGAAGT	18	-	56921635-56921684	18qD3	Mus musculus membrane-associated ring finger (C3HC4) 3 (March3), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC130167; 6330411I15Rik; A530081L18Rik; MGC130168; MARCH-III	MGC130167; 6330411I15Rik; A530081L18Rik; MGC130168; MARCH-III
Mus musculus	RefSeq	ILMN_213386	ILMN_251937	LOC638892	XM_915073.1	XM_915073.1		638892	82796068	XM_915073.1	LOC638892	XP_920166.1	ILMN_1213364	004250424	S	216	CAGTGTGAAAGTTGGAGATAAAGTTCTTCTCCCAGAATATGGAGGCACCA					PREDICTED: Mus musculus similar to cpn10 protein (LOC638892), mRNA.					
Mus musculus	RefSeq	ILMN_222350	ILMN_252253	ALPI	NM_001081082.1	NM_001081082.1		76768	124487322	NM_001081082.1	Alpi	NP_001074551.1	ILMN_1241497	007570482	S	2259	CTGAACAAAGAATATTATTAGGTTCTTGTCCCCAGTCCTAGAAGAGACAT	1	-	88994605-88994654	1qD	Mus musculus alkaline phosphatase, intestinal (Alpi), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum [goid 4035] [evidence IEA]	2010001C14Rik	2010001C14Rik
Mus musculus	RefSeq	ILMN_199403	ILMN_199403	OLFR1218	NM_146818.2	NM_146818.2		258815	112983593	NM_146818.2	Olfr1218	NP_667029.2	ILMN_2755085	003440189	S	864	CAGGAATAAGGAAATGATAAATGCCATCAGAAAAATGTGCAAGAGACTGA	2	-	88894668-88894717	2qE1	Mus musculus olfactory receptor 1218 (Olfr1218), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR233-12	MOR233-12
Mus musculus	RefSeq	ILMN_210432	ILMN_210432	AMDHD2	NM_172935.2	NM_172935.2		245847	31982132	NM_172935.2	Amdhd2	NP_766523.2	ILMN_2831944	002320671	S	1081	AAGACACTGGGTGGCAGCATAGCCCCCATGGATGTGTGCGTCCGGCATTT	17	-	23884276-23884294:23885150-23885180	17qA3.3	Mus musculus amidohydrolase domain containing 2 (Amdhd2), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IEA]	Catalysis of the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetate [goid 8448] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	5730457F11Rik	5730457F11Rik
Mus musculus	MEEBO	ILMN_220665	ILMN_220665	1100001I19RIK	scl0244745.1_43	NM_172920.1			27370415	NM_172920.1	1100001I19Rik		ILMN_1256578	001240379	S	3415	TGGAGCAGTATTAGATTTTATGTAGCTGACAATGCAGTATTAAAGCTCAG										
Mus musculus	Riken	ILMN_202241	ILMN_202241	MRPL20	ri|4930425I20|PX00030J02|AK015199|826					AK015199	Mrpl20		ILMN_2548062	001990100	S	559	AAGGTACTCACCTCAGAGAGGGAACCATTGACTGACCAAAGTAAGGATAC						The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194509	ILMN_194509	IGHV1S126_AF304545_IG_HEAVY_VARIABLE_1S126_140	IGHV1S126_AF304545_Ig_heavy_variable_1S126_140						IGHV1S126_AF304545_Ig_heavy_variable_1S126_140		ILMN_1233397	002750524	S	17	CCTTCTGATAGTTATACTAACAACAATCAAAAGTTCAAGGACAAGGCCAC										
Mus musculus	RefSeq	ILMN_209762	ILMN_311666	2010109A12RIK	XM_001475713.1	XM_001475713.1		75610	149254027	XM_001475713.1	2010109A12Rik	XP_001475763.1	ILMN_2598981	004810014	S	483	GGTCCACTGAAACTATAACTCAGGAAGTTACAGCACACGTATAATAATGA	5	+	93642431-93642474:93642475-93642480	5qE2	PREDICTED: Mus musculus RIKEN cDNA 2010109A12 gene (2010109A12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223767	ILMN_223767	H2-EB1	NM_010382.2	NM_010382.2		14969	114431227	NM_010382.2	H2-Eb1	NP_034512.2	ILMN_1239102	000520072	S	921	GTCTCCATGCCATGAAAACATGTCCTGCTTGGCCCACATCCCTCCAGAGA	17	+	34451133-34451182	17qB1	Mus musculus histocompatibility 2, class II antigen E beta (H2-Eb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ia-4; H2Eb; H-2E beta; H2-Eb; H-2Eb; Ia4; E-beta-b	Ia-4; H2Eb; H-2E beta; H2-Eb; H-2Eb; Ia4; E-beta-b
Mus musculus	RefSeq	ILMN_188186	ILMN_227789	LOC634943	XM_909825.2	XM_909825.2		634943	94378307	XM_909825.2	LOC634943	XP_914918.2	ILMN_1232817	001660148	S	2398	CAGTCCCTAAAATCATGAGGCAATGAGAAATCACTTAGAAGCCAACTTTC					PREDICTED: Mus musculus similar to aryl hydrocarbon receptor nuclear translocator-like 2 (LOC634943), mRNA.					
Mus musculus	RefSeq	ILMN_230311	ILMN_230311	CD27	NM_001033126.2	NM_001033126.2		21940	110350005	NM_001033126.2	Cd27	NP_001028298.1	ILMN_3128992	004810204	A	1424	GACTGCCGTGAGAGACACTATCTACAGACACACAGACTTCCTGGCCTTGG	6	-	125182742-125182791	6qF3	Mus musculus CD27 antigen (Cd27), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence NAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IPI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	S152; Tnfrsf7; Tp55	S152; Tnfrsf7; Tp55
Mus musculus	RefSeq	ILMN_195441	ILMN_230311	CD27	NM_001033126.2	NM_001033126.2		21940	110350005	NM_001033126.2	Cd27	NP_001028298.1	ILMN_1233589	000990376	S	1101	GAAACCGTCCAGCTGACAAAACTACATGCCAGGGGTGGAAATGGCTCACC	6	-	125183065-125183114	6qF3	Mus musculus CD27 antigen (Cd27), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence NAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IPI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	S152; Tnfrsf7; Tp55	S152; Tnfrsf7; Tp55
Mus musculus	RefSeq	ILMN_230311	ILMN_230311	CD27	NM_001033126.2	NM_001033126.2		21940	110350005	NM_001033126.2	Cd27	NP_001028298.1	ILMN_3052501	002030471	I	504	TCTAAACCCTGCACTGACCAGACAGCCATCTGAGACCCCGAGCCCACAGC	6	-	125184562-125184611	6qF3	Mus musculus CD27 antigen (Cd27), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence NAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IPI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	S152; Tnfrsf7; Tp55	S152; Tnfrsf7; Tp55
Mus musculus	RefSeq	ILMN_238871	ILMN_238871	GAK	NM_153569.1	NM_153569.1		231580	51317386	NM_153569.1	Gak	NP_705797.1	ILMN_2837025	003940066	S	4311	GTGGCTGTCACCTCTTGGATGGCACATGTCGCTGGCACTTCTCTCCTGTC	5	-	108998525-108998574	5qF	Mus musculus cyclin G associated kinase (Gak), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130045N16Rik; MGC31204	D130045N16Rik; MGC31204
Mus musculus	RefSeq	ILMN_218922	ILMN_218922	D330028D13RIK	NM_172727.2	NM_172727.2		231946	142375544	NM_172727.2	D330028D13Rik	NP_766315.1	ILMN_1217670	000270403	S	1200	GGCGTTGGGATCACGGTATTCTTGCCTTACCGTGTGTATGCTCGCTCTCT	6	+	49339095-49339144	6qB2.3	Mus musculus RIKEN cDNA D330028D13 gene (D330028D13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201500	ILMN_201500	LOC385267	XM_358158.1	XM_358158.1			38095012	XM_358158.1	LOC385267		ILMN_1258472	003420577	S	121	GGCTTCGTACTTGAGAGGCAGAGGAAGAAGGCACGGCTGGAACGGGCTAT										
Mus musculus	RefSeq	ILMN_215695	ILMN_215695	SPNA1	NM_011465.3	NM_011465.3		20739	118130160	NM_011465.3	Spna1	NP_035595.2	ILMN_2662527	002810544	S	7348	AATCATAGTGTGGCAGCAAGTAATGGGGGATAAGAGGCACAAGCAAGCGT	1	+	176177615-176177664	1qH3	Mus musculus spectrin alpha 1 (Spna1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence TAS]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ha; sph; AI451697; AF093576; Spna-1	ha; sph; AI451697; AF093576; Spna-1
Mus musculus	MEEBO	ILMN_208658	ILMN_208658	RAD51L3	scl0019364.1_120	NM_011235.2			31543573	NM_011235.2	Rad51l3		ILMN_2700532	000460292	S	453	CTGGCCTCTATACTGGGGAGGTGACTGAAATTGTGGGTGGCCCAGGTAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190167	ILMN_190167	9430069I07RIK	scl47318.4.1_88						9430069I07Rik		ILMN_1258855	006200088	S	19	CTATAAGGAGAACATCTTTCCAACAGTCCTGAGGCTCATGCGTGGAGAGG										
Mus musculus	RefSeq	ILMN_214003	ILMN_214003	COL25A1	NM_198711.2	NM_198711.2		77018	46397404	NM_198711.2	Col25a1	NP_942004.1	ILMN_2643186	004760746	S	2665	TGGCTGCCTCTAGTTTTCCTTGGGCGACGCTTGGTGGTGAAGATGCGGGA	3	+	130298746-130298795	3qG3	Mus musculus collagen, type XXV, alpha 1 (Col25a1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2700062B08Rik	2700062B08Rik
Mus musculus	RefSeq	ILMN_214003	ILMN_214003	COL25A1	NM_198711.2	NM_198711.2		77018	46397404	NM_198711.2	Col25a1	NP_942004.1	ILMN_2643187	006020286	S	2668	CTGCCTCTAGTTTTCCTTGGGCGACGCTTGGTGGTGAAGATGCGGGACGA	3	+	130298749-130298798	3qG3	Mus musculus collagen, type XXV, alpha 1 (Col25a1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2700062B08Rik	2700062B08Rik
Mus musculus	RefSeq	ILMN_214003	ILMN_214003	COL25A1	NM_198711.2	NM_198711.2		77018	46397404	NM_198711.2	Col25a1	NP_942004.1	ILMN_1237273	001450609	S	2663	GATGGCTGCCTCTAGTTTTCCTTGGGCGACGCTTGGTGGTGAAGATGCGG	3	+	130298744-130298793	3qG3	Mus musculus collagen, type XXV, alpha 1 (Col25a1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2700062B08Rik	2700062B08Rik
Mus musculus	RefSeq	ILMN_214003	ILMN_214003	COL25A1	NM_198711.2	NM_198711.2		77018	46397404	NM_198711.2	Col25a1	NP_942004.1	ILMN_2651754	001070196	S	1215	CCCACCTGGGGACACAGGAAAGGACGGCCCCCGAGGAATGCCAGGAGTAC	3	+	130179343-130179392	3qG3	Mus musculus collagen, type XXV, alpha 1 (Col25a1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2700062B08Rik	2700062B08Rik
Mus musculus	RefSeq	ILMN_224126	ILMN_325776	LOC100038860	XM_001471916.1	XM_001471916.1		100038860	149268463	XM_001471916.1	LOC100038860	XP_001471966.1	ILMN_2775235	000060674	S	566	GCGGAGAGAATGTACTGGAGGTGGCAAAGGGTGTAGGAATAGTGTGCATC	17	+	33336572-33336621	17qB1	PREDICTED: Mus musculus hypothetical protein LOC100038860 (LOC100038860), mRNA.					
Mus musculus	RefSeq	ILMN_261110	ILMN_261110	AA407270	NM_001033208.1	NM_001033208.1		102371	85701615	NM_001033208.1	AA407270	NP_001028380.1	ILMN_2913989	004570201	S	1951	CTCCAGGGAGGAGAATGTGTGCTGGGCTATGGGAGCCATGTTCAGAGATT	9	-	71303189-71303238	9qD	Mus musculus expressed sequence AA407270 (AA407270), mRNA.				AV006038	AV006038
Mus musculus	MEEBO	ILMN_191922	ILMN_191922	SCL000854.1_75	scl000854.1_75	AK087931.1			26104610	AK087931.1	scl000854.1_75		ILMN_2495068	007210184	S	19	AGAAGAGACTGGAGTGAAAAAGAGCAAGGCGGCTAAGGAACCAGATCAGC										
Mus musculus	MEEBO	ILMN_210028	ILMN_210028	CCND1	scl0012443.2_180	NM_007631.1			6680867	NM_007631.1	Ccnd1		ILMN_1221503	007200044	S	3522	GGCCATAGACTGGTGGTGGGTCCACGGAATCTGCCCTGTGACATGAAAGG						Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The resumption of the mitotic cell division cycle by cells that were in a quiescent or other non-dividing state [goid 320] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IDA]		
Mus musculus	MEEBO	ILMN_210028	ILMN_210028	CCND1	scl0012443.2_180	NM_007631.1			6680867	NM_007631.1	Ccnd1		ILMN_2601471	005690441	S	3523	GCCATAGACTGGTGGTGGGTCCACGGAATCTGCCCTGTGACATGAAAGGC						Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The resumption of the mitotic cell division cycle by cells that were in a quiescent or other non-dividing state [goid 320] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IDA]		
Mus musculus	Riken	ILMN_206770	ILMN_206770	E030003B04RIK	ri|E030003B04|PX00204A12|AK086820|1328					AK086820	E030003B04Rik		ILMN_1233169	005700368	S	942	GTGCACAGGTCAGGACACCTTGCCAGAGTCAGTTCTTTTCTTCCTCCATG										
Mus musculus	RefSeq	ILMN_218032	ILMN_218032	EIF3S10	NM_010123.2	NM_010123.2		13669	46575902	NM_010123.2	Eif3s10	NP_034253.2	ILMN_2845039	002850612	S	5033	GAGTAATAACCATTTGGCTCTTATTGAAGCCAACACGGAATTTGCTGCTG	19	-	60837062-60837111	19qD3	Mus musculus eukaryotic translation initiation factor 3, subunit 10 (theta) (Eif3s10), mRNA.				A830012B05Rik; Eif3; mKIAA0139; Csma	A830012B05Rik; Eif3; mKIAA0139; Csma
Mus musculus	RefSeq	ILMN_210725	ILMN_210725	TINAG	NM_012033.2	NM_012033.2		26944	31981313	NM_012033.2	Tinag	NP_036163.2	ILMN_1248959	007200400	S	1415	CGCAGCGTGGGGCCAACTGACAAGTTCAGATGATCCATAGCTATCACATT	9	-	76799693-76799703:76799704-76799742	9qD	Mus musculus tubulointerstitial nephritis antigen (Tinag), mRNA.				TIN-ag; AI452335	TIN-ag; AI452335
Mus musculus	RefSeq	ILMN_210725	ILMN_210725	TINAG	NM_012033.2	NM_012033.2		26944	31981313	NM_012033.2	Tinag	NP_036163.2	ILMN_2608526	005820402	S	463	GGAAATGTTCCCAACATGTGTGCCTTGTTCATCCAGAATTAATTGACCAC	9	-	76879515-76879564	9qD	Mus musculus tubulointerstitial nephritis antigen (Tinag), mRNA.				TIN-ag; AI452335	TIN-ag; AI452335
Mus musculus	RefSeq	ILMN_187051	ILMN_323813	DDN	XM_001476216.1	XM_001476216.1		13199	149267082	XM_001476216.1	Ddn	XP_001476266.1	ILMN_2440740	000630072	S	3540	GCGCGCCGAGCCCTTCTTTGTATTAATCCACGCCAACCGGTTTGAGACTG				15qF1	PREDICTED: Mus musculus dendrin (Ddn), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_202437	ILMN_229355	6130401L20RIK	XM_896354.2	XM_896354.2		75740	94369468	XM_896354.2	6130401L20Rik	XP_901447.1	ILMN_1233360	003420463	S	2529	CTGCATAGCTCAGGCACAGGACCCAAGCTGACATGGTGACATCTTTCTGC	3	+	29862507-29862556	3qA3	PREDICTED: Mus musculus RIKEN cDNA 6130401L20 gene, transcript variant 2 (6130401L20Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	Riken	ILMN_207029	ILMN_207029	A830007N09RIK	ri|A830007N09|PX00661L09|AK080591|862					AK080591	A830007N09Rik		ILMN_1215123	005270152	S	1	GAGTTCCTCGGCCGCGACGAGCTTAGGGCGTCTAAGAATAATGCTATAAT										
Mus musculus	RefSeq	ILMN_220720	ILMN_220720	ABCG5	NM_031884.1	NM_031884.1		27409	14141177	NM_031884.1	Abcg5	NP_114090.1	ILMN_2725781	004290400	S	2075	GTCTACAACCATCAGGATTCCATCTGCGACCCTTGTGTCTGACCCTTGTG	17	-	85057712-85057761	17qE4	Mus musculus ATP-binding cassette, sub-family G (WHITE), member 5 (Abcg5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	MGC123400; Sterolin-1; AW112016; sterolin 1	MGC123400; Sterolin-1; AW112016; sterolin 1
Mus musculus	MEEBO	ILMN_218994	ILMN_218994	SV2A	scl064051.13_189	NM_022030.2			31543791	NM_022030.2	Sv2a		ILMN_2702887	000160484	S	3721	GCCTCAGTTTCCCCGTTTTGCCCTTCCACAGAACAGCCTTGTAGGTAGAG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	Riken	ILMN_206191	ILMN_206191	A530058H06RIK	ri|A530058H06|PX00142M11|AK080081|1127					AK080081	A530058H06Rik		ILMN_1214251	005260021	S	174	TGAGGCCCCTCCTCCAGCCGCAGGGAAAAAAAGAAAGTCTCAGCGGGGGT										
Mus musculus	RefSeq	ILMN_213680	ILMN_213680	NPTXR	NM_030689.3	NM_030689.3		73340	61676209	NM_030689.3	Nptxr	NP_109614.2	ILMN_2997326	005260270	S	159	ATGCTGGCGTTCCTCGGTGCCGTCATCTGCATCATCGCCAGCGTGCCCCT	15	-	79631756-79631805	15qE1	Mus musculus neuronal pentraxin receptor (Nptxr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NPR; 5730406O18Rik; AI452369; D15Bwg0580e; AI785356; 1200009K17Rik; Npcd; 1700036C17Rik	NPR; 5730406O18Rik; AI452369; D15Bwg0580e; AI785356; 1200009K17Rik; Npcd; 1700036C17Rik
Mus musculus	MEEBO	ILMN_223998	ILMN_223998	PLEK2	scl42313.9.1_68				7305392	NM_013738	Plek2		ILMN_2772855	003520725	S	1071	GCTAACATGATCTAAAGGAGCGGGACCAGGGTTCTCATCATTGGATACAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]			
Mus musculus	RefSeq	ILMN_209406	ILMN_209406	ADPRHL1	NM_172750.3	NM_172750.3		234072	146198706	NM_172750.3	Adprhl1	NP_766338.1	ILMN_1247158	004250349	S	1070	CTGCCTGTTCGGGTTGCTGCACGGCCTGGCCACTGTTCCACGGGGCTTGT				8qA1.1	Mus musculus ADP-ribosylhydrolase like 1 (Adprhl1), mRNA.		The process of removing one or more ADP-ribose residues from a protein [goid 51725] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: N2-(ADP-D-ribosyl)-L-arginine + H2O = L-arginine + ADP-ribose [goid 3875] [evidence IEA]	D330008N11Rik; Arh2	D330008N11Rik; Arh2
Mus musculus	RefSeq	ILMN_209406	ILMN_209406	ADPRHL1	NM_172750.3	NM_172750.3		234072	146198706	NM_172750.3	Adprhl1	NP_766338.1	ILMN_1257998	004480079	S	185	CGGCTATGGAAACATCTGCAGGGAGAACAGCGTTTTAGGCTCAATCCAGG				8qA1.1	Mus musculus ADP-ribosylhydrolase like 1 (Adprhl1), mRNA.		The process of removing one or more ADP-ribose residues from a protein [goid 51725] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: N2-(ADP-D-ribosyl)-L-arginine + H2O = L-arginine + ADP-ribose [goid 3875] [evidence IEA]	D330008N11Rik; Arh2	D330008N11Rik; Arh2
Mus musculus	Riken	ILMN_206350	ILMN_206350	RAD23B	ri|D430011I09|PX00193B24|AK084917|2177					AK084917	Rad23b		ILMN_1247862	006330390	S	1850	GGTAAACTTACCTGTTTTCCAAAGGAGGTAGGTCTCCCATGGCCCATTAT						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]		
Mus musculus	MEEBO	ILMN_220014	ILMN_220014	G630008E18	scl27303.4.1_1				51711355	XM_489105	G630008E18		ILMN_1230006	006480110	S	1320	TCTTTGGCCTCCTGTTGTATTTCTCAGCATGTATACATGTGTGTTGCCTG										
Mus musculus	RefSeq	ILMN_223228	ILMN_223228	PTPN13	NM_011204.2	NM_011204.2		19249	134948761	NM_011204.2	Ptpn13	NP_035334.2	ILMN_2761152	006560259	S	8021	GCAAAAATTTTCCAGTATTTTAATAAAGTAGATTTATTTTATAGGGGATA	5	+	104027119-104027168	5qE5	Mus musculus protein tyrosine phosphatase, non-receptor type 13 (Ptpn13), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ptpri; PTP-BL; RIP; AI324989	Ptpri; PTP-BL; RIP; AI324989
Mus musculus	RefSeq	ILMN_220852	ILMN_220852	E430004N04RIK	NM_178666.5	NM_178666.5		210757	146198707	NM_178666.5	E430004N04Rik	NP_848781.1	ILMN_1214364	004070450	S	3630	GTCTCTGCATTTTGGTTTTTAGACACCATAGAGAATCATGACCCAACCAC				10qA4	Mus musculus RIKEN cDNA E430004N04 gene (E430004N04Rik), mRNA.				A430108D01; BB160712	A430108D01; BB160712
Mus musculus	RefSeq	ILMN_193170	ILMN_228611	PEG13	NR_002864.1	NR_002864.1		353342	84872159	NR_002864.1	Peg13		ILMN_1249637	006660181	S	4607	CCCCCTTGCTTATAGGTAAGCTTCCTGTGGAGGGGGTCCCCATTGGATTC	15	-	72636098-72636147	15qD3	Mus musculus paternally expressed 13 (Peg13), non-coding RNA.					
Mus musculus	RefSeq	ILMN_223475	ILMN_223475	OLFR32	NM_010980.1	NM_010980.1		18331	33468916	NM_010980.1	Olfr32	NP_035110.1	ILMN_1214661	000240110	S	623	TTCTTTTCTTGGTGTCCTCTTACATTGTTATCCTGTATAACTTGAGGAAC	2	-	89978622-89978671	2qE1	Mus musculus olfactory receptor 32 (Olfr32), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR227-9_p; MOR227-7P; MTPCR05	MOR227-9_p; MOR227-7P; MTPCR05
Mus musculus	RefSeq	ILMN_186711	ILMN_238723	COL4A5	NM_007736.3	NM_007736.3		12830	142348194	NM_007736.3	Col4a5	NP_031762.2	ILMN_2437848	006250463	S	6076	CCTGTGGGCTCATTTGTGTAAGAAGACAGTATTTGCTTAGTCTTCTCCCT	X	+	138107830-138107879	XqF2	Mus musculus collagen, type IV, alpha 5 (Col4a5), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IDA]				
Mus musculus	RefSeq	ILMN_219383	ILMN_219383	RNASET2B	NM_026611.2	NM_026611.2		68195	86439982	NM_026611.2	Rnaset2b	NP_080887.1	ILMN_3026198	005700026	I	693	AATCCAGTGCCTTATGCCAGAACAGGGAGAGAGCGTGCAGACCGTTGGCC	17	+	7200833-7200857:7202247-7202271	17qA1	Mus musculus ribonuclease T2B (Rnaset2b), mRNA.				C79750; RNASE6PL; MGC107248; Rnaset2; 4833423A10Rik; 4930532K22Rik; 0610007O07Rik	C79750; RNASE6PL; MGC107248; Rnaset2; 4833423A10Rik; 4930532K22Rik; 0610007O07Rik
Mus musculus	RefSeq	ILMN_218914	ILMN_218914	SLCO1C1	NM_021471.1	NM_021471.1		58807	10946865	NM_021471.1	Slco1c1	NP_067446.1	ILMN_1242173	005900044	S	2283	CAAGCATCAAAAAGGAGACATGCGCTGCAAGGGATCGTGGATTGCAGCCC	6	+	141517967-141518016	6qG2	Mus musculus solute carrier organic anion transporter family, member 1c1 (Slco1c1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	OATP-F; MGC90655; Slc21a14; Oatp2	OATP-F; MGC90655; Slc21a14; Oatp2
Mus musculus	MEEBO	ILMN_187356	ILMN_187356	1700001E18RIK	scl14715.1.1_13						1700001E18Rik		ILMN_2443409	001230377	S	6	CAGGACCCCGGGCGGATGGCCTTACTTGCTGCTCTCCAGACGAAAGTCAT										
Mus musculus	MEEBO	ILMN_190345	ILMN_190345	TRIM27	scl019720.8_242				6677726	NM_009054	Trim27		ILMN_2499747	007150491	S	20	TGGACCATAGGTGTCTGTGAAGACTCGGTGTGCAGAAAAGGTGGGGTGAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISO]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any epigenetic process that stops, prevents or reduces the rate of gene expression [goid 45814] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214914	ILMN_310888	LOC100041835	XM_001478119.1	XM_001478119.1		100041835	149262510	XM_001478119.1	LOC100041835	XP_001478169.1	ILMN_1230991	000650161	S	265	CAGTTGGTGTGGCTGGATCAGGAGCTGGCATTGGCACAGTGTTTGGTAGC	11	-	100223164-100223213	11qD	PREDICTED: Mus musculus similar to H+ ATP synthase (LOC100041835), mRNA.					
Mus musculus	RefSeq	ILMN_194153	ILMN_234820	PREB	NM_016703.1	NM_016703.1		50907	7710083	NM_016703.1	Preb	NP_057912.1	ILMN_2683621	001070026	S	1798	TTAGGGTAGGAAGAGGCACAAAGAGGACCCCGGTAGCGGTGATCTGTGGC	5	-	31257552-31257601	5qB1	Mus musculus prolactin regulatory element binding (Preb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]	C85705	C85705
Mus musculus	RefSeq	ILMN_214603	ILMN_214603	DDX3Y	NM_012008.1	NM_012008.1		26900	25141234	NM_012008.1	Ddx3y	NP_036138.1	ILMN_1235995	006520685	S	3513	TGTTGATTACAGTGTGTCAAGAACTTGGTTCAGAAAATTTTCCATGGACC	Y	-	599074-599123	YqA1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked (Ddx3y), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	D1Pas1-rs1; 8030469F12Rik; Dby	D1Pas1-rs1; 8030469F12Rik; Dby
Mus musculus	RefSeq	ILMN_214603	ILMN_214603	DDX3Y	NM_012008.1	NM_012008.1		26900	25141234	NM_012008.1	Ddx3y	NP_036138.1	ILMN_2899607	004120196	S	3491	CCTTGAAGTTCCAATTGGATATTGTTGATTACAGTGTGTCAAGAACTTGG	Y	-	599096-599145	YqA1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked (Ddx3y), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	D1Pas1-rs1; 8030469F12Rik; Dby	D1Pas1-rs1; 8030469F12Rik; Dby
Mus musculus	RefSeq	ILMN_214603	ILMN_214603	DDX3Y	NM_012008.1	NM_012008.1		26900	25141234	NM_012008.1	Ddx3y	NP_036138.1	ILMN_2899599	006510477	S	3662	TGTGGCCAGCCTGTTCTGCATAGTGAGTTCCAGGACAGCTAGGGCTCTAC	Y	-	598925-598974	YqA1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked (Ddx3y), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	D1Pas1-rs1; 8030469F12Rik; Dby	D1Pas1-rs1; 8030469F12Rik; Dby
Mus musculus	RefSeq	ILMN_221880	ILMN_257817	SAMD7	NM_029489.2	NM_029489.2		75953	141802080	NM_029489.2	Samd7	NP_083765.1	ILMN_2741563	003780280	S	2720	ATTCAGTTGTGGACTGTGGCCATGTGTGGTGGGAGTGGAAACGAGGGGTC	3	+	30665750-30665799	3qA3	Mus musculus sterile alpha motif domain containing 7 (Samd7), mRNA.				4930597A01Rik	4930597A01Rik
Mus musculus	RefSeq	ILMN_240245	ILMN_240245	4833424O15RIK	NM_029425.1	NM_029425.1		75769	58037432	NM_029425.1	4833424O15Rik	NP_083701.1	ILMN_2780022	007000669	S	3532	CCGATAGAGACTCTCATTTTTATTCTGCTTCTTTGGGGCCCAGGTCAACG	3	+	117392051-117392100	3qG1	Mus musculus RIKEN cDNA 4833424O15 gene (4833424O15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	PRG-5; Pap2d	PRG-5; Pap2d
Mus musculus	RefSeq	ILMN_196442	ILMN_240245	4833424O15RIK	NM_029425.1	NM_029425.1		75769	58037432	NM_029425.1	4833424O15Rik	NP_083701.1	ILMN_2679157	007560750	S	3694	AGAGGTGAGCCTTCTTTGATAGAGTTTGTCTATTCGACTTCTAACTGGGC	3	+	117392213-117392262	3qG1	Mus musculus RIKEN cDNA 4833424O15 gene (4833424O15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	PRG-5; Pap2d	PRG-5; Pap2d
Mus musculus	RefSeq	ILMN_219709	ILMN_219709	CTSR	NM_020284.1	NM_020284.1		56835	9931985	NM_020284.1	Ctsr	NP_064680.1	ILMN_2712480	001450102	S	1114	GCATTTCTAGGGGAGGGCTATCTGCTAGTCAGCGACCAGCCTTTGCTTGG	13	-	61260747-61260796	13qB2	Mus musculus cathepsin R (Ctsr), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence ISA]	AI428350	AI428350
Mus musculus	RefSeq	ILMN_213677	ILMN_213677	NTSR1	NM_018766.2	NM_018766.2		18216	141801633	NM_018766.2	Ntsr1	NP_061236.1	ILMN_2639572	000580468	S	3782	ATGAGCCCAGTCGTGATGTGGAAACAAGTCGTGTGCCCCAAATATCTGTC	2	+	180279550-180279599	2qH4	Mus musculus neurotensin receptor 1 (Ntsr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; G-protein coupled receptor for the tridecapeptide neurotensin. Associated with G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [goid 16492] [evidence IEA]; Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [evidence TAS]	NT-1R; NTR-1	NT-1R; NTR-1
Mus musculus	MEEBO	ILMN_188001	ILMN_188001	C130092E12	scl51240.1.1_8						C130092E12		ILMN_2448997	000240553	S	12	GCTGCCAACTGGTCAATCTGGAAGGGTAGTTCTGCCCTGGATTGGTGTCT										
Mus musculus	RefSeq	ILMN_247273	ILMN_247273	CNTNAP5A	NM_001077425.1	NM_001077425.1		636808	116734826	NM_001077425.1	Cntnap5a	NP_001070893.1	ILMN_2984802	004290091	S	2040	CCACTGTAGGAGATCCCGTCTGCTTAACACACCAGATGGAGCCCCATTCA	1	+	118189078-118189112:118308664-118308678	1qE2.3	Mus musculus contactin associated protein-like 5A (Cntnap5a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EG636808; Caspr5-1	EG636808; Caspr5-1
Mus musculus	RefSeq	ILMN_200371	ILMN_200371	LOC386350	XM_359181.1	XM_359181.1			38081452	XM_359181.1	LOC386350		ILMN_1246728	005960768	S	47	CTGGGGATGTAATGACAGGAAGATCCCAGGACTCACTGCCTAGCCAAGCT										
Mus musculus	RefSeq	ILMN_218238	ILMN_218238	ALKBH7	NM_025538.2	NM_025538.2		66400	142381110	NM_025538.2	Alkbh7	NP_079814.1	ILMN_1251766	000870598	S	649	GGCCAGAAGAGCCACCTCCAGCCTGCTGACCTCCCACATATCCTCCATAT	17	+	57138487-57138515:57138516-57138536	17qD	Mus musculus alkB, alkylation repair homolog 7 (E. coli) (Alkbh7), mRNA.			Hydroxylase, with 2-oxoglutarate as one donor, and incorporation or reduction of one atom each of oxygen into both donors [goid 10302] [evidence IDA]	2510008E23Rik; 2310045B01Rik; Spata11; Abh7	2510008E23Rik; 2310045B01Rik; Spata11; Abh7
Mus musculus	RefSeq	ILMN_216225	ILMN_216225	PAQR7	NM_027995.2	NM_027995.2		71904	142388621	NM_027995.2	Paqr7	NP_082271.1	ILMN_1222036	006450370	S	1750	ATGATTTTGAGATATGACTCCTTAGCTCACTGTTTCCTGGGGCTCCAGGC	4	+	134064408-134064457	4qD3	Mus musculus progestin and adipoQ receptor family member VII (Paqr7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AV001994; Mpra; mPR; BB007237; PGLP; 2310021M12Rik	AV001994; Mpra; mPR; BB007237; PGLP; 2310021M12Rik
Mus musculus	RefSeq	ILMN_218629	ILMN_218629	GTL3	NM_008187.1	NM_008187.1		14894	6680126	NM_008187.1	Gtl3	NP_032213.1	ILMN_2698259	005270519	S	1046	CGTGAGAGACGCACGCAACAAACGGAAGAATTAGAGACGTCCTACAAGGC	8	-	97944271-97944320	8qD1	Mus musculus gene trap locus 3 (Gtl3), mRNA.				AL024127; T10-2A2; 2600014O15Rik	AL024127; T10-2A2; 2600014O15Rik
Mus musculus	MEEBO	ILMN_189459	ILMN_189459	SLC6A9	scl25046.21.440_3				6680028	NM_008135	Slc6a9		ILMN_1217832	000730008	S	20	GGATGCCAGACTGCACTCTGAGCAACAGGGACACAGCCGTGTCCAGGACA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of glycine, aminoethanoic acid, into, out of, within or between cells [goid 15816] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + Na+(out) = amino acid(in) + Na+(in) [goid 5283] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of glycine from one side of a membrane to the other. Glycine is aminoethanoic acid [goid 15187] [evidence IDA]		
Mus musculus	RefSeq	ILMN_186809	ILMN_236862	NDUFAB1	NM_028177.3	NM_028177.3		70316	141802109	NM_028177.3	Ndufab1	NP_082453.2	ILMN_2732281	000160193	S	657	GGTAGCTGAAGAATTGGCGCAAAAATGCATGTGGATCGTTTCTGCTGAAG	7	-	129231651-129231700	7qF3	Mus musculus NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 (Ndufab1), mRNA.	The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Enables the directed movement of acyl groups into, out of, within or between cells [goid 36] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]	SDAP; 8kDa; 2310039H15Rik; 2210401F17Rik; 2610003B19Rik; 9130423F15Rik	SDAP; 8kDa; 2310039H15Rik; 2210401F17Rik; 2610003B19Rik; 9130423F15Rik
Mus musculus	RefSeq	ILMN_209189	ILMN_209189	PRSS7	NM_178855.3	NM_178855.3		19146	108936961	NM_178855.3	Prss7	NP_849186.2	ILMN_2593409	001940561	S	3573	TCTATAGACATTATTTGTCTTGAATCAATTGTTATCATTTTCTGTTGTGT	16	-	78953767-78953816	16qC3.1	Mus musculus protease, serine, 7 (enterokinase) (Prss7), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	A130097D21Rik	A130097D21Rik
Mus musculus	Riken	ILMN_202836	ILMN_202836	IDH3A	ri|6720452A11|PX00059B13|AK032787|1477					AK032787	Idh3a		ILMN_1227815	006960762	S	1116	CAAAGACTTAGATTAGCACTCCTGCTGGTTGTATTTATTGTCCGTCTGGT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH + H+ [goid 4449] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191687	ILMN_191687	1190004M23RIK	scl783.1.1_90						1190004M23Rik		ILMN_2481279	007160040	S	19	CCCTTGTCTGGCTCACAGCTAGCTTTTGGGTGGGACAGGAGGTATTCCTG										
Mus musculus	MEEBO	ILMN_214713	ILMN_214713	OLFR1126	scl0258834.1_29	NM_146837.1			22129184	NM_146837.1	Olfr1126		ILMN_1252123	004290053	S	575	GCTGGCCTGTGGAGATACTTCAATACACGAGTTGTCTGTCTACTTAGTAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	Riken	ILMN_204595	ILMN_204595	1200012P04RIK	ri|1200012P04|R000009O21|AK004731|2904					AK004731	1200012P04Rik		ILMN_1245384	006580168	S	2673	TCACAGACTGTCAGGAAGCACACGTGCAGGCCTCTTCATCTGGGAACCAG										
Mus musculus	RefSeq	ILMN_208796	ILMN_208796	PTRH1	NM_178595.3	NM_178595.3		329384	141802363	NM_178595.3	Ptrh1	NP_848710.1	ILMN_2589615	007330050	S	330	TCTGGTCCATGATGAACTGGACAAGCCGTTGGGAAAGCTGGCTCTGAAGC	2	+	32632261-32632310	2qB	Mus musculus peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) (Ptrh1), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA [goid 4045] [evidence IEA]	AW046744; 2210013M04Rik	AW046744; 2210013M04Rik
Mus musculus	RefSeq	ILMN_227893	ILMN_227893	OLFR332	NM_001011770.1	NM_001011770.1		257932	58801317	NM_001011770.1	Olfr332	NP_001011770.1	ILMN_2874298	001010253	S	768	CATCTACATGACGCCCACTTCTTCCCACACACCCGACCAGGACCAGGTAG	11	-	58303438-58303487	11qB1.3	Mus musculus olfactory receptor 332 (Olfr332), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-465K20.9; MOR284-2	RP23-465K20.9; MOR284-2
Mus musculus	MEEBO	ILMN_187214	ILMN_187214	5730409E15RIK	scl0320670.2_87						5730409E15Rik		ILMN_2442161	006060048	S	12	GATTTGCTGCCAGCAGGGCAGAAATGACAGAAACGATACAGAAGGGATCC										
Mus musculus	Riken	ILMN_206341	ILMN_206341	D330026F23RIK	ri|D330026F23|PX00192L03|AK084659|3026					AK084659	D330026F23Rik		ILMN_2579391	002690309	S	2581	TCTATGGAGGTGTGGGTAGAGAGACTTGAGACAGGCAGCAGCATAGTTGC										
Mus musculus	RefSeq	ILMN_213938	ILMN_213938	TAS2R130	NM_199156.1	NM_199156.1		387355	40255296	NM_199156.1	Tas2r130	NP_954607.1	ILMN_2642480	002190338	S	780	GCCAGAGAGTGAATTAGCTGTAATATGGGGTGAGCTGATAGCTCTAATCT	6	-	131580019-131580068	6qF3	Mus musculus taste receptor, type 2, member 130 (Tas2r130), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	STC 7-4; mt2r42; T2R30; Tas2r30	STC 7-4; mt2r42; T2R30; Tas2r30
Mus musculus	MEEBO	ILMN_189095	ILMN_189095	1700027F06RIK	scl28432.2.1_29						1700027F06Rik		ILMN_2458328	005050307	S	4	CACCGCAGTGGTCACCAGCTGTTTTGATGCTGCACTGTGGCCTCACTTTT										
Mus musculus	RefSeq	ILMN_210004	ILMN_236782	4921506M07RIK	NM_001037743.1	NM_001037743.1		70846	83627684	NM_001037743.1	4921506M07Rik	NP_001032832.1	ILMN_1226012	005700379	S	1343	GGAACCAAGAGGATTCATGCAAATCAGAGGAAGAGAAGTTAAGCCAACAT	12	+	58722960-58723009	12qC1	Mus musculus RIKEN cDNA 4921506M07 gene (4921506M07Rik), mRNA.				MGC118322	MGC118322
Mus musculus	MEEBO	ILMN_209035	ILMN_209035	PMM2	scl49447.9_394	XM_147219.1			20891712	XM_147219.1	Pmm2		ILMN_2591935	000150181	S	1507	GTCTGGTCACTTTAACCCTCAGTGTCAAAAGGGTGTCTACCCCAGGTTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose [goid 19307] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-mannose 1-phosphate = D-mannose 6-phosphate [goid 4615] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212424	ILMN_212424	NINJ2	NM_016718.2	NM_016718.2		29862	120407046	NM_016718.2	Ninj2	NP_057927.1	ILMN_2626283	004590692	S	551	CATTTCCCACAGCCTCCAGGAGAGCTTCAAGGGCTACGAAGAAACCCCTG	6	+	120150085-120150134	6qF1	Mus musculus ninjurin 2 (Ninj2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The regrowth of lost or destroyed tissues [goid 42246] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC143502	MGC143502
Mus musculus	RefSeq	ILMN_208739	ILMN_208739	GHSR	NM_177330.2	NM_177330.2		208188	31341084	NM_177330.2	Ghsr	NP_796304.1	ILMN_2872464	005270609	S	4016	TGCATGCCTGCCAATTATTTTAAATTGGAAAGTCTAGCTGGGTGTGGTGG	3	+	27568666-27568715	3qA3	Mus musculus growth hormone secretagogue receptor (Ghsr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that increases appetite [goid 32100] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat [goid 32094] [evidence IDA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IDA]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IGI]; Any process that increases the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43568] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51963] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [evidence IEA]	C530020I22Rik	C530020I22Rik
Mus musculus	RefSeq	ILMN_238798	ILMN_238798	UCHL3	NM_016723.1	NM_016723.1		50933	7710105	NM_016723.1	Uchl3	NP_057932.1	ILMN_2970879	006450039	S	276	CCATCAGCAATGCCTGTGGAACGATTGGACTAATCCATGCCATTGCGAAC	14	+	100552548-100552597	14qE2.3	Mus musculus ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) (Uchl3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence ISA]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IGI]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191647	ILMN_191647	5930403N24RIK	scl39021.4.1_52				31342989	NM_177177	5930403N24Rik		ILMN_2704840	005890376	S	1949	GAGCTGCTGGTCTTTACCTGCTGCAGTTCCCCTACAGTTTGGTGGTCTCC										
Mus musculus	MEEBO	ILMN_189181	ILMN_189181	E030034P13RIK	scl51031.3_342				24418894	NM_153791	E030034P13Rik		ILMN_2459045	007150689	S	19	CATCTGAAGGATGGGAAACGCCTGCAAGGATGGGAAGCATTTGGGGTGCC										
Mus musculus	RefSeq	ILMN_210527	ILMN_210527	ATP6AP2	NM_027439.3	NM_027439.3		70495	141801711	NM_027439.3	Atp6ap2	NP_081715.1	ILMN_2725286	005570068	S	384	CCTTATTTTCGGAGGAAACACCTGTAGTTTTGCAGTTGGCTCCCAGCGAG	X	+	12182036-12182085	XqA1.1	Mus musculus ATPase, H+ transporting, lysosomal accessory protein 2 (Atp6ap2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	M8-9; APT6M8-9; 5730403E06Rik; Atp6ip2; ATP6M8-9	M8-9; APT6M8-9; 5730403E06Rik; Atp6ip2; ATP6M8-9
Mus musculus	RefSeq	ILMN_210527	ILMN_210527	ATP6AP2	NM_027439.3	NM_027439.3		70495	141801711	NM_027439.3	Atp6ap2	NP_081715.1	ILMN_2628658	005360338	S	136	TGGAAATTGGCCTATACCAGGAGATCGAATCCCAGACGTAGCTGCACTGT	X	+	12171945-12171994	XqA1.1	Mus musculus ATPase, H+ transporting, lysosomal accessory protein 2 (Atp6ap2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	M8-9; APT6M8-9; 5730403E06Rik; Atp6ip2; ATP6M8-9	M8-9; APT6M8-9; 5730403E06Rik; Atp6ip2; ATP6M8-9
Mus musculus	RefSeq	ILMN_210133	ILMN_316864	C920006O11RIK	XM_001475726.1	XM_001475726.1		320295	149260038	XM_001475726.1	C920006O11Rik	XP_001475776.1	ILMN_1213875	007000100	S	1426	CACCATCTATGGATGCTTCGCTTTTGATGTGTTTGCCTGTTTATAATCTA	9	+	78026591-78026640	9qE1	PREDICTED: Mus musculus RIKEN cDNA C920006O11 gene (C920006O11Rik), mRNA.					
Mus musculus	Riken	ILMN_206327	ILMN_206327	D330016G23RIK	ri|D330016G23|PX00191K24|AK084573|1056					AK084573	D330016G23Rik		ILMN_1243157	002070075	S	761	GTCCTAGGCCCTCACCAGGCAAGTAACAGTCCAGATTGTGTGCTCACTCC										
Mus musculus	RefSeq	ILMN_210633	ILMN_261196	YIF1B	NM_029887.2	NM_029887.2		77254	141803382	NM_029887.2	Yif1b	NP_084163.1	ILMN_2607609	004900685	S	741	CTCACGGGTCTGCTCTTTGGAAAGATCGGCTACTACCTGGTGCTTGCCTG	7	+	30030936-30030985	7qB1	Mus musculus Yip1 interacting factor homolog B (S. cerevisiae) (Yif1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Yip1b; 9430029K10Rik; MGC130116	Yip1b; 9430029K10Rik; MGC130116
Mus musculus	Riken	ILMN_206312	ILMN_206312	TRP53	ri|D030074L07|PX00182E23|AK083750|3276					AK083750	Trp53		ILMN_1231006	002680025	S	3090	TAGGTCCCCAGCGGCTCACGGTGCCTTTAGTCCACCTAACCCACAACTGG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of glucose [goid 42149] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell [goid 2347] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IGI]; The expansion of a T cell population by cell division during an immune response [goid 2309] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A cell cycle checkpoint that arrests cell cycle progression G1 phase in response to DNA damage [goid 31571] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IGI]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The process whereby a lymphoid progenitor cell becomes committed to become any type of B cell [goid 2326] [evidence IMP]; The process by which a lymphoid progenitor cell becomes committed to becoming any type of T cell [goid 2360] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 30330] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The formation of a covalent cross-link between RNA and a protein [goid 18144] [evidence IEA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISO]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IGI]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISO]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IGI]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence ISO]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 30330] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_216726	ILMN_216726	RENBP	NM_023132.2	NM_023132.2		19703	51871122	NM_023132.2	Renbp	NP_075621.2	ILMN_2674533	005900450	S	1329	CTCCTCGCCCGCTGTCTCTACCCATGAAGGCTCGAAATAAAGATGACCCT	X	-	71173626-71173675	XqA7.3	Mus musculus renin binding protein (Renbp), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IEA]; The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IMP]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: D-mannose 6-phosphate = D-fructose 6-phosphate [goid 4476] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Catalysis of the reaction: N-acyl-D-glucosamine = N-acyl-D-mannosamine [goid 50121] [evidence IMP]		
Mus musculus	MEEBO	ILMN_217207	ILMN_217207	SEC14L1	scl40690.19.366_4				21311922	NM_028777	Sec14l1		ILMN_2680307	003400612	S	2439	TGAGAGCATCTTTAAGAGCTCAAAGCACACAACTGCACACTCACAGGCCC										
Mus musculus	MEEBO	ILMN_217164	ILMN_217164	EPHB4	scl0013846.2_9	NM_010144.2			31560595	NM_010144.2	Ephb4		ILMN_1230479	003840731	S	3698	GTTCTAGAACAGTGCCTTGGAAATGCCACAGCCTTAGACAGTTCCCCGGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_217164	ILMN_217164	EPHB4	scl0013846.2_9	NM_010144.2			31560595	NM_010144.2	Ephb4		ILMN_2777884	006250452	S	4174	TGGTGGTGGTCAACAGAGGCAGACAACGGTGCTTGGAAGGGGGTTCTTAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205824	ILMN_205824	A530041M22RIK	ri|A530041M22|PX00141C24|AK040902|2505					AK040902	A530041M22Rik		ILMN_2575490	005050132	S	2025	CTGCTTGCCATCTATCTTGAGTGCATCACAGCTTTTGAAGTAGGGCACAG										
Mus musculus	RefSeq	ILMN_241259	ILMN_241259	ALG3	NM_145939.1	NM_145939.1		208624	22122364	NM_145939.1	Alg3	NP_666051.1	ILMN_2910106	003830092	S	1268	GGCTGTCCCCCGAGTCCTTCCCTAAGAGCATTCAGCCAAGCAGGAAAACT	16	-	20605633-20605682	16qB1	Mus musculus asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase) (Alg3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 30] [evidence IEA]; Catalysis of the transfer of an alpha-D-mannosyl residue from dolichyl-phosphate D-mannose into membrane lipid-linked oligosaccharide [goid 4584] [evidence IEA]	D16Ertd36e; MGC36684	D16Ertd36e; MGC36684
Mus musculus	RefSeq	ILMN_211821	ILMN_241259	ALG3	NM_145939.1	NM_145939.1		208624	22122364	NM_145939.1	Alg3	NP_666051.1	ILMN_1215893	000070603	S	1181	TTGAGCTCTCCTGGAATACGTACCCATCCACGTCCTTCAGCTCTGCCGCC	16	-	20605720-20605769	16qB1	Mus musculus asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase) (Alg3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 30] [evidence IEA]; Catalysis of the transfer of an alpha-D-mannosyl residue from dolichyl-phosphate D-mannose into membrane lipid-linked oligosaccharide [goid 4584] [evidence IEA]	D16Ertd36e; MGC36684	D16Ertd36e; MGC36684
Mus musculus	MEEBO	ILMN_209132	ILMN_209132	DAO1	scl0013142.1_12	NM_010018.1			6753601	NM_010018.1	Dao1		ILMN_2592844	000780255	S	670	ACAACTCTCCGTACATCATCCCAGGTTCCAAGACAGTTACACTCGGAGGT						A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving leucine, 2-amino-4-methylpentanoic acid [goid 6551] [evidence IMP]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 3884] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195991	ILMN_231388	GRPEL2	NM_021296.2	NM_021296.2		17714	87196330	NM_021296.2	Grpel2	NP_067271.1	ILMN_2732092	003870010	S	3178	CTTGGGTTTTTAGAGCATTGGGGATTGGATGCAAGGTCTCATGAATGCCA	18	-	61872896-61872945	18qE1	Mus musculus GrpE-like 2, mitochondrial (Grpel2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins [goid 774] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IDA]	mt-Grpel2; mt-GrpE#2	mt-Grpel2; mt-GrpE#2
Mus musculus	Riken	ILMN_204953	ILMN_204953	D330025A21RIK	ri|D330025A21|PX00192I13|AK052308|1179					AK052308	D330025A21Rik		ILMN_1228204	006580538	S	952	GTGCTCACAGTTTTAGGGAAGAGCCCACCGTGGATGTGGAACGCATAGCG										
Mus musculus	RefSeq	ILMN_217398	ILMN_217398	4930451I11RIK	NM_183131.2	NM_183131.2		78118	114158653	NM_183131.2	4930451I11Rik	NP_898954.2	ILMN_2682763	002650167	S	406	CCTGGACCCAGCTGTGAGCCACACACATCTACCCTGCCTTCTGTTGAGAA	7	-	133974007-133974056	7qF3	Mus musculus RIKEN cDNA 4930451I11 gene (4930451I11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_253872	ILMN_253872	CD151	NM_009842.1	NM_009842.1		12476	6753333	NM_009842.1	Cd151	NP_033972.1	ILMN_2836710	005720100	S	1562	GAGGGAAACTCCAACCCCACACTTGATGCTCTGTCCTCTCCACACAGGCC	7	+	141322532-141322581	7qF5	Mus musculus CD151 antigen (Cd151), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			SFA-1; PETA-3; Tspan24	SFA-1; PETA-3; Tspan24
Mus musculus	Riken	ILMN_203685	ILMN_203685	MAPK8IP3	ri|9530077J01|PX00113J22|AK035619|2945					AK035619	Mapk8ip3		ILMN_2559196	003450333	S	2738	CCTCGACCTTCACAACAGAGAAGCAAAAGGACCTGAAGGGCAGCTGTTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; The smooth endoplasmic reticulum (ER) has with no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER [goid 5790] [evidence IDA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IDA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IDA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IPI]; Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]		
Mus musculus	MEEBO	ILMN_189187	ILMN_189187	TTYH2	scl40750.12.1_29	NM_053273.1			16716610	NM_053273.1	Ttyh2		ILMN_2491859	002260528	S	19	GGGTTCTACAAGAGTCGGGTGGGCAAACCTCTTCTTGATCCATGTTCGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]		
Mus musculus	Riken	ILMN_203746	ILMN_203746	TBL1	ri|9930034E22|PX00120G07|AK036996|3611					AK036996	Tbl1		ILMN_1223751	004880538	S	2885	GGGGTGGTATTCATGGTCACCAGACTCCTGGGGATGCTTTGGTCTGCATC										
Mus musculus	MEEBO	ILMN_188216	ILMN_188216	DUSP4	scl279.1.1_54				31581570	NM_176933	Dusp4		ILMN_2450767	006270181	S	2	GAGCATTGTGAGTGAGCTCAATATAGTGTCTGGGTGTTGATGTTATTTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193603	ILMN_234534	ALKBH8	NM_026303.1	NM_026303.1		67667	61675695	NM_026303.1	Alkbh8	NP_080579.1	ILMN_1258943	002450707	S	2176	CGTAGGTTCCTCTTACATGCCTTTTAAGTATGGTGTTTGACATTAACTTG	9	+	3385753-3385802	9qA1	Mus musculus alkB, alkylation repair homolog 8 (E. coli) (Alkbh8), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	8030431D03Rik; Abh8; 9430088N01Rik; MGC10235; 4930562C03Rik	8030431D03Rik; Abh8; 9430088N01Rik; MGC10235; 4930562C03Rik
Mus musculus	RefSeq	ILMN_223480	ILMN_223480	1810009N02RIK	NM_026939.1	NM_026939.1		69099	21729756	NM_026939.1	1810009N02Rik	NP_081215.1	ILMN_2764607	002000037	S	1495	GGGATTGACAGCAAGGACGTGAAGTGAAGTCATGGGCAACAGGAAGTGCT					Mus musculus RIKEN cDNA 1810009N02 gene (1810009N02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209688	ILMN_209688	MRP63	NM_026401.1	NM_026401.1		67840	13385887	NM_026401.1	Mrp63	NP_080677.1	ILMN_2790113	001660722	S	1970	GGGCACCGATCTCTGTCTCCCTAGTGCTATATACTACCATACCCAATCCT	14	+	56782504-56782553	14qC3	Mus musculus mitochondrial ribosomal protein 63 (Mrp63), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IDA]	AV005697; 2610025P17Rik	AV005697; 2610025P17Rik
Mus musculus	RefSeq	ILMN_222862	ILMN_222862	CRB3	NM_177638.4	NM_177638.4		224912	118130453	NM_177638.4	Crb3	NP_808306.1	ILMN_2755888	004730402	S	738	TGCTGGGGCCAGGGGAGGCCTTACTGCCTCACCATTTACCTCATAGGACC	17	+	57204919-57204968	17qD	Mus musculus crumbs homolog 3 (Drosophila) (Crb3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISA]	The specification and formation of the apicobasal polarity of an epithelial cell [goid 45198] [evidence ISA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells [goid 45216] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	AU041752; AU015179; 5730439B18	AU041752; AU015179; 5730439B18
Mus musculus	RefSeq	ILMN_222273	ILMN_222273	CD82	NM_007656.4	NM_007656.4		12521	145966699	NM_007656.4	Cd82	NP_031682.1	ILMN_2747196	001510739	S	1461	CTTCATAGGTTTTCCATGTTTCTGTGGGAGACAGGGTAGGCAATTCTTCC				2qE1	Mus musculus CD82 antigen (Cd82), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Kai1; AL023070; C33; Tspan27; AA682076	Kai1; AL023070; C33; Tspan27; AA682076
Mus musculus	RefSeq	ILMN_211039	ILMN_211039	CASP1	NM_009807.2	NM_009807.2		12362	86198304	NM_009807.2	Casp1	NP_033937.2	ILMN_1247592	001940722	S	1355	CACTGCTGATAGGGTGACCCTGACAAAACGTTTCTACCTCTTCCCGGGAC	9	+	5306714-5306763	9qA1	Mus musculus caspase 1 (Casp1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IDA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IDA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus [goid 42221] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 alpha from a cell or group of cells [goid 50717] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	ICE; Il1bc	ICE; Il1bc
Mus musculus	RefSeq	ILMN_223674	ILMN_322545	LOC100046609	XR_033250.1	XR_033250.1		100046609	149263643	XR_033250.1	LOC100046609		ILMN_2767554	001430521	S	3592	TTATACTATTATAATTCTAGTTTCTGACAGTCAGTAGCTTCACATTACAT					PREDICTED: Mus musculus similar to RIKEN cDNA 4932415G16 gene (LOC100046609), misc RNA.					
Mus musculus	RefSeq	ILMN_186876	ILMN_234644	MYO18B	XM_912851.3	XM_912851.3		74376	149254327	XM_912851.3	Myo18b	XP_917944.3	ILMN_1255404	005130328	S	5502	GCATCAGAAAGACCGTGAGGACCAGGAGGAAGAGCTGGAGGATGTGCGTC				5qF	PREDICTED: Mus musculus myosin XVIIIb (Myo18b), mRNA.					
Mus musculus	RefSeq	ILMN_216825	ILMN_234644	MYO18B	XM_912851.3	XM_912851.3		74376	149254327	XM_912851.3	Myo18b	XP_917944.3	ILMN_2675785	004560070	S	8138	GCCACCCTCAAGACATAGGATGGGCCCAGAGAGACATGTCCTAGCAGATC				5qF	PREDICTED: Mus musculus myosin XVIIIb (Myo18b), mRNA.					
Mus musculus	Riken	ILMN_207024	ILMN_207024	9130604K18RIK	ri|9130604K18|PX00651P17|AK078977|1002					AK078977	9130604K18Rik		ILMN_1236628	000520102	S	642	GGAGCTTCGTGGAGGTTCCTGGACTGCCAGCGCCCATCGGTTTGGCTAAA										
Mus musculus	MEEBO	ILMN_214594	ILMN_214594	IPAS	scl000193.1_228				17432318	AF416641	Ipas		ILMN_2649671	001660056	S	978	CCCACAAATGTCTCCAAAACCACCATAAAGACCTCTCCTTGTTAGGCACC										
Mus musculus	RefSeq	ILMN_221557	ILMN_221557	MBP	NM_010777.3	NM_010777.3		17196	95104790	NM_010777.3	Mbp	NP_034907.1	ILMN_2737200	001450646	S	2211	CGTCACCCCTAGGAAGGCAGGTGATGGTTGATGTAGCCCAATACTGCATC	18	+	82754709-82754758	18qE3	Mus musculus myelin basic protein (Mbp), transcript variant 7, mRNA.	An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath [goid 33269] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]	mld; shi; R75289; C76307; golli-mbp; Hmbpr	mld; shi; R75289; C76307; golli-mbp; Hmbpr
Mus musculus	RefSeq	ILMN_261581	ILMN_261581	ROBO4	NM_028783.2	NM_028783.2		74144	27229186	NM_028783.2	Robo4	NP_083059.2	ILMN_2942011	002630333	S	3515	GGAGAAAGGTCGTGGATGCAGTGGGCCCTATACAGCGTCACAGTCAATGC	9	+	37221433-37221482	9qA4	Mus musculus roundabout homolog 4 (Drosophila) (Robo4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	1200012D01Rik; AI593217	1200012D01Rik; AI593217
Mus musculus	RefSeq	ILMN_186816	ILMN_261581	ROBO4	NM_028783.2	NM_028783.2		74144	27229186	NM_028783.2	Robo4	NP_083059.2	ILMN_2658919	005390047	S	308	ATCGGCCCTCTGTCCAGGGACGGCCACAAGATGACCAGAACATCCTCTCA	9	+	37210341-37210390	9qA4	Mus musculus roundabout homolog 4 (Drosophila) (Robo4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	1200012D01Rik; AI593217	1200012D01Rik; AI593217
Mus musculus	RefSeq	ILMN_219710	ILMN_241206	E2F8	NM_001013368.4	NM_001013368.4		108961	142380194	NM_001013368.4	E2f8	NP_001013386.2	ILMN_2712498	001090091	S	982	TACACTTGGCATGGCCGGCACAACCTCACCAAAACCCTCGGGACGCTGAA	7	-	56131010-56131059	7qB4	Mus musculus E2F transcription factor 8 (E2f8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	4432406C08Rik; AA410048	4432406C08Rik; AA410048
Mus musculus	RefSeq	ILMN_200369	ILMN_200369	LOC386342	XM_359177.1	XM_359177.1			38081444	XM_359177.1	LOC386342		ILMN_2538518	005700678	S	216	GTTACAGGCTCTTAAAGAAAAGCAGGAAAACACATCCAAACAGGTGATGG										
Mus musculus	RefSeq	ILMN_216763	ILMN_216763	RNF14	NM_020012.1	NM_020012.1		56736	9910591	NM_020012.1	Rnf14	NP_064396.1	ILMN_2868579	004480110	S	2787	GATTCGGTAAGTGGCTTGGTAGTTACTTGGTGGATGTTTTGAAGGGACAG	18	+	38477304-38477353	18qB3	Mus musculus ring finger protein 14 (Rnf14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AU041447; AA986456; 2310075C09Rik; D18Ertd188e; D7Bwg0165e; Triad2; 2610005D23Rik	AU041447; AA986456; 2310075C09Rik; D18Ertd188e; D7Bwg0165e; Triad2; 2610005D23Rik
Mus musculus	RefSeq	ILMN_216763	ILMN_216763	RNF14	NM_020012.1	NM_020012.1		56736	9910591	NM_020012.1	Rnf14	NP_064396.1	ILMN_2675078	001430711	S	1439	GGGTGATTCAGAAGGCCCTGGAGGAGATGGAAAGTAAAGACTGGCTGGAG	18	+	38472947-38472996	18qB3	Mus musculus ring finger protein 14 (Rnf14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AU041447; AA986456; 2310075C09Rik; D18Ertd188e; D7Bwg0165e; Triad2; 2610005D23Rik	AU041447; AA986456; 2310075C09Rik; D18Ertd188e; D7Bwg0165e; Triad2; 2610005D23Rik
Mus musculus	RefSeq	ILMN_216763	ILMN_216763	RNF14	NM_020012.1	NM_020012.1		56736	9910591	NM_020012.1	Rnf14	NP_064396.1	ILMN_2682811	003460386	S	503	CACCACTTGTGCTGAACTTTGAACTGCCACCAGATTATCCATCCTCCTCC	18	+	38461367-38461416	18qB3	Mus musculus ring finger protein 14 (Rnf14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AU041447; AA986456; 2310075C09Rik; D18Ertd188e; D7Bwg0165e; Triad2; 2610005D23Rik	AU041447; AA986456; 2310075C09Rik; D18Ertd188e; D7Bwg0165e; Triad2; 2610005D23Rik
Mus musculus	RefSeq	ILMN_216763	ILMN_216763	RNF14	NM_020012.1	NM_020012.1		56736	9910591	NM_020012.1	Rnf14	NP_064396.1	ILMN_1228499	001580446	S	2271	CTAGTGCTTGCCAGAATAGAAGTCTATAGTACATTAAAAGTATTTTTAGT	18	+	38476788-38476837	18qB3	Mus musculus ring finger protein 14 (Rnf14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AU041447; AA986456; 2310075C09Rik; D18Ertd188e; D7Bwg0165e; Triad2; 2610005D23Rik	AU041447; AA986456; 2310075C09Rik; D18Ertd188e; D7Bwg0165e; Triad2; 2610005D23Rik
Mus musculus	RefSeq	ILMN_197617	ILMN_197617	LOC380947	XM_354855.1	XM_354855.1			38076879	XM_354855.1	LOC380947		ILMN_1215758	006330064	S	905	GTGTCCCAAGTGCCAAGGAACAGCAGTGTGTAAACTCCAGCAGAAACCGG										
Mus musculus	RefSeq	ILMN_189800	ILMN_238664	CD200	NM_010818.3	NM_010818.3		17470	111955311	NM_010818.3	Cd200	NP_034948.3	ILMN_1214255	000270139	S	117	GGAGATATCCTCCATCGTGGAAGAGCTCAGACCCCGAGAAGCTGGTGTCT	16	-	45409000-45409049	16qB5	Mus musculus CD200 antigen (Cd200), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mox2; OX2	Mox2; OX2
Mus musculus	RefSeq	ILMN_192815	ILMN_192815	VGLL4	NM_177683.2	NM_177683.2		232334	31343305	NM_177683.2	Vgll4	NP_808351.1	ILMN_2491589	005860470	S	12	GCCCGCAACTGCAACCTCTCTCACTGTCCCATCGCACACAGTGGCTGTTC	6	-	114871709-114871758	6qE3	Mus musculus vestigial like 4 (Drosophila) (Vgll4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		BC048841; VGL-4; MGC54805	BC048841; VGL-4; MGC54805
Mus musculus	RefSeq	ILMN_188276	ILMN_234642	THAP6	XM_980102.1	XM_980102.1		381650	94374926	XM_980102.1	Thap6	XP_985196.1	ILMN_2451293	006520369	S	1432	GAAGCCAAAAGCGTGTTAAAGATGTGCAGAAAGCTGGTGTGGTCATGCTC	5	+	92398922-92398971	5qE2	PREDICTED: Mus musculus THAP domain containing 6 (Thap6), mRNA.					
Mus musculus	RefSeq	ILMN_199469	ILMN_199469	LOC383529	XM_357105.1	XM_357105.1			38049620	XM_357105.1	LOC383529		ILMN_2535322	006770554	S	256	CAGGCCCTGGACAGGCGCCATGTGATGCTCTATAAGGAGAAAGATGATGA										
Mus musculus	RefSeq	ILMN_198534	ILMN_234584	EG628040	XM_892769.2	XM_892769.2		628040	94407003	XM_892769.2	EG628040	XP_897862.1	ILMN_1239173	006760040	S	242	ATGAGGCCGCAGCAGGCACCGGTGTTCATTCAGCTAGACTACAGCAGCGG	X	-	8905184-8905233	XqA1.1	PREDICTED: Mus musculus predicted gene, EG628040 (EG628040), mRNA.					
Mus musculus	Riken	ILMN_204201	ILMN_204201	C820018A03RIK	ri|C820018A03|PX00088M01|AK050559|3212					AK050559	C820018A03Rik		ILMN_1216829	003390360	S	3035	TGTGGGTCTTGGGAATAAGTTCAGGGTTGGTAGCAGGTTCCCTTACCCCC										
Mus musculus	RefSeq	ILMN_212315	ILMN_212315	C430004E15RIK	NM_175286.3	NM_175286.3		97031	118129853	NM_175286.3	C430004E15Rik	NP_780495.1	ILMN_2625047	002570070	S	2610	CCTACCTTTTGAGGAGTGGCCACTGCGAGGAGTGAGAGGCTACCCTAGTT	2	+	25125228-25125277	2qA3	Mus musculus RIKEN cDNA C430004E15 gene (C430004E15Rik), mRNA.				MGC107193; C87750	MGC107193; C87750
Mus musculus	RefSeq	ILMN_198422	ILMN_198422	LOC330402	XM_287641.1	XM_287641.1			28544655	XM_287641.1	LOC330402		ILMN_1256615	001740343	S	998	TCTATCCACAAGTTCTGAATGGGCAGAAAGCCCATAGGGAGGGGGATCTC										
Mus musculus	MEEBO	ILMN_212446	ILMN_212446	PMM2	scl0001908.1_5				8393987	NM_016881	Pmm2		ILMN_2724530	006520538	S	326	CTGGGGGAGGATGTGATCCAAGACCTGATCAACTACTGTCTGAGCTACAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose [goid 19307] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-mannose 1-phosphate = D-mannose 6-phosphate [goid 4615] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186205	ILMN_186205	COBLL1	scl20863.2.1_60				32441278	NM_177025	Cobll1		ILMN_1224324	006400398	S	6	GAGGACTGGACGTTCTCATGATGACAGTCTATAAGCTAAGAAAGAACAGC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_186205	ILMN_186205	COBLL1	scl20863.2.1_60				32441278	NM_177025	Cobll1		ILMN_2471710	002490133	S	12	GGTCAATCAGCAGGACTCGGTCCATGAGCTCTCCTCACTTCCGCTACAGC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_198942	ILMN_198942	LOC244911	XM_146937.2	XM_146937.2			38089950	XM_146937.2	LOC244911		ILMN_2533474	006130609	S	212	AGATGTGGTGTCTGGAGCGGCTCTTGCGGGACCGAGATGGGTTTCTCCCG										
Mus musculus	RefSeq	ILMN_209850	ILMN_209850	IRF1	NM_008390.1	NM_008390.1		16362	6680466	NM_008390.1	Irf1	NP_032416.1	ILMN_2599782	003360138	S	1708	AAGGTTGGCTCCCTTAGCCTCAGAGGGAATCTGCCTCACTACCTGCTCCA	11	+	53590460-53590509	11qB1.3	Mus musculus interferon regulatory factor 1 (Irf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell [goid 43374] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AU020929; Irf-1	AU020929; Irf-1
Mus musculus	RefSeq	ILMN_209850	ILMN_209850	IRF1	NM_008390.1	NM_008390.1		16362	6680466	NM_008390.1	Irf1	NP_032416.1	ILMN_2624100	001190088	S	234	CCTGGCTAGAGATGCAGATTAATTCCAACCAAATCCCAGGGCTGATCTGG	11	+	53584818-53584867	11qB1.3	Mus musculus interferon regulatory factor 1 (Irf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell [goid 43374] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AU020929; Irf-1	AU020929; Irf-1
Mus musculus	RefSeq	ILMN_209850	ILMN_209850	IRF1	NM_008390.1	NM_008390.1		16362	6680466	NM_008390.1	Irf1	NP_032416.1	ILMN_2649068	005820609	S	331	TAAGCACGGCTGGGACATCAACAAGGATGCCTGTCTGTTCCGGAGCTGGG	11	+	53586378-53586427	11qB1.3	Mus musculus interferon regulatory factor 1 (Irf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell [goid 43374] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AU020929; Irf-1	AU020929; Irf-1
Mus musculus	RefSeq	ILMN_209850	ILMN_209850	IRF1	NM_008390.1	NM_008390.1		16362	6680466	NM_008390.1	Irf1	NP_032416.1	ILMN_2649067	003400288	S	329	CTAAGCACGGCTGGGACATCAACAAGGATGCCTGTCTGTTCCGGAGCTGG	11	+	53586376-53586425	11qB1.3	Mus musculus interferon regulatory factor 1 (Irf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell [goid 43374] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AU020929; Irf-1	AU020929; Irf-1
Mus musculus	RefSeq	ILMN_209850	ILMN_209850	IRF1	NM_008390.1	NM_008390.1		16362	6680466	NM_008390.1	Irf1	NP_032416.1	ILMN_2834777	006660634	S	1985	CCACCTAACTGCTAAATGGTGTTTGGTCATGTGGTGGACCTGTGTAAATA	11	+	53590737-53590786	11qB1.3	Mus musculus interferon regulatory factor 1 (Irf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell [goid 43374] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AU020929; Irf-1	AU020929; Irf-1
Mus musculus	RefSeq	ILMN_212461	ILMN_212461	SPSB4	NM_145134.2	NM_145134.2		211949	31982569	NM_145134.2	Spsb4	NP_660116.1	ILMN_1243507	003370703	S	2059	GCGCCACCATTTGGCATCTTTTGTGTGTTCCAAGATACCCTCCACCCAGA	9	-	96752957-96753006	9qE3.3	Mus musculus splA/ryanodine receptor domain and SOCS box containing 4 (Spsb4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		SSB-4; D030068E18Rik; Ssb4	SSB-4; D030068E18Rik; Ssb4
Mus musculus	RefSeq	ILMN_218270	ILMN_218270	SYNJ2BP	NM_025292.4	NM_025292.4		24071	146134888	NM_025292.4	Synj2bp	NP_079568.1	ILMN_1252068	000780184	S	216	GGGACAGATCAACAGTATGTCTCCAACGACAGTGGCATCTACGTCAGCCG				12qD1	Mus musculus synaptojanin 2 binding protein (Synj2bp), mRNA.	The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 7028] [evidence ISO]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ARIP2; ActRIP4; OMP25; ARIP2a	ARIP2; ActRIP4; OMP25; ARIP2a
Mus musculus	RefSeq	ILMN_218270	ILMN_218270	SYNJ2BP	NM_025292.4	NM_025292.4		24071	146134888	NM_025292.4	Synj2bp	NP_079568.1	ILMN_2693760	007510114	S	4569	AGTTTTAAGTTAGATACATGCTCTTTGTAGTATTTTGGGTTTTATTGTGC				12qD1	Mus musculus synaptojanin 2 binding protein (Synj2bp), mRNA.	The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 7028] [evidence ISO]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ARIP2; ActRIP4; OMP25; ARIP2a	ARIP2; ActRIP4; OMP25; ARIP2a
Mus musculus	RefSeq	ILMN_224240	ILMN_258868	DNAJB7	NM_021317.2	NM_021317.2		57755	119392095	NM_021317.2	Dnajb7	NP_067292.2	ILMN_2777208	004180762	S	1083	CTGTCTAGACTCATTATGATCATACAACATTTGAACACCACTTTCCTGTG	15	-	81237571-81237620	15qE1	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 7 (Dnajb7), mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	mDj5; 4933424H20Rik; Dj5	mDj5; 4933424H20Rik; Dj5
Mus musculus	RefSeq	ILMN_216013	ILMN_216013	DNAJC5G	NM_177677.3	NM_177677.3		231098	142364807	NM_177677.3	Dnajc5g	NP_808345.1	ILMN_2666340	004830594	S	1485	GGCCCAGGAACCATCAAACCTCTCTCTATTCACTGGGAAAAAGGCTAAGG	5	+	31414819-31414868	5qB1	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 5 gamma (Dnajc5g), mRNA.				4922503E23Rik; MGC107182	4922503E23Rik; MGC107182
Mus musculus	RefSeq	ILMN_198871	ILMN_310509	1700016D18RIK	XR_034068.1	XR_034068.1		76418	149258596	XR_034068.1	1700016D18Rik		ILMN_1258542	003840358	S	976	TCCCCCAAGAACTGGCTAAATCGTTACAGCTACCAATGCACCTCCATCTC	8	+	38168761-38168810	8qA4	PREDICTED: Mus musculus RIKEN cDNA 1700016D18 gene (1700016D18Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_216919	ILMN_216919	SPESP1	NM_025721.2	NM_025721.2		66712	141802273	NM_025721.2	Spesp1	NP_079997.1	ILMN_2676961	004390079	S	2777	GCCCTATGCTACCCCACTTCCTGTATGCTCAACTGGATCCTCAAGACCAT	9	-	62118722-62118771	9qB	Mus musculus sperm equatorial segment protein 1 (Spesp1), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		4921508E09Rik; AI428149	4921508E09Rik; AI428149
Mus musculus	RefSeq	ILMN_200569	ILMN_200569	LOC383363	XM_357007.1	XM_357007.1			38083830	XM_357007.1	LOC383363		ILMN_2539220	003390689	S	241	AAGCACAATGAGTCTGAGAGGACCAAGCACAACGCTGCGCTTAACTTTAA										
Mus musculus	RefSeq	ILMN_215454	ILMN_215454	FOXH1	NM_007989.3	NM_007989.3		14106	145966770	NM_007989.3	Foxh1	NP_032015.1	ILMN_2659741	004900731	S	705	GAAGAAGGGATGGGCACTGGACCCTCTAGCTCCTCTGAGACGCCTCTGTG				15qD3	Mus musculus forkhead box H1 (Foxh1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A transcriptionally active complex that binds to an activin response element (ARE) in the promoter of target genes, and is composed of two SMAD2 proteins, one SMAD4 protein and a Forkhead activin signal transducer (FAST) transcription factor [goid 32444] [evidence IDA]	The process whose specific outcome is the progression of the axial mesoderm over time, from its formation to the mature structure. The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord [goid 48318] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The establishment, maintenance and elaboration of cell differentiation that results in the anterior/posterior subdivision of the embryonic heart tube. In Drosophila this results in subdivision of the dorsal vessel into to the posterior heart proper and the anterior aorta [goid 35054] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Fast2	Fast2
Mus musculus	RefSeq	ILMN_198945	ILMN_198945	LOC331000	XM_287936.5	XM_287936.5		331000	94386318	XM_287936.5	LOC331000	XP_287936.5	ILMN_1226873	004490411	S	1401	AAGGGCTGGAGGCGGTTTGCTCAGGCGGCAGAGGTTATGGTCTGAAGACT	9	+	92054246-92054295	9qE3.3	PREDICTED: Mus musculus similar to phospholipid scramblase 1 (LOC331000), mRNA.					
Mus musculus	RefSeq	ILMN_198225	ILMN_198225	LOC225096	XM_140138.3	XM_140138.3			38082979	XM_140138.3	LOC225096		ILMN_1243820	006590670	S	834	AGACTCTCCACAAAACTGCAGCCCTGGTACCAAAGTTGACAACCTCTCTG										
Mus musculus	RefSeq	ILMN_188542	ILMN_224554	9330182L06RIK	NM_172706.3	NM_172706.3		231014	142353435	NM_172706.3	9330182L06Rik	NP_766294.2	ILMN_1234490	007210128	S	4232	GTTCGAAAGCAACCCAGAAACTTGTGACATTTCTCATGATGGATTACCAG	5	+	9480322-9480371	5qA1	Mus musculus RIKEN cDNA 9330182L06 gene (9330182L06Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_197058	ILMN_197058	LOC271048	XM_194860.2	XM_194860.2			38073720	XM_194860.2	LOC271048		ILMN_1217972	006770441	S	725	ACTGCCTGGGAGTGGAGCGAGAGGAACTTGGCAAATGGAAGATGCCCTTT										
Mus musculus	RefSeq	ILMN_213295	ILMN_228835	3100002J23RIK	XM_001002726.1	XM_001002726.1		75429	94390085	XM_001002726.1	3100002J23Rik	XP_001002726.1	ILMN_2635708	004810465	S	537	CTCTTGGTGGAGTGAACCTGCACACTGAATTCCCCAGTGTATGTGTTTCC	11	-	58606336-58606385	11qB1.3	PREDICTED: Mus musculus RIKEN cDNA 3100002J23 gene, transcript variant 2 (3100002J23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196288	ILMN_256871	PPM1B	NM_011151.1	NM_011151.1		19043	33859599	NM_011151.1	Ppm1b	NP_035281.1	ILMN_2729953	007650044	S	336	GCGGCGGGCGAGCCCGCGAGACCTCCCTTTCTACCTTCGCCCCAGATTCA	17	+	85357690-85357734:85393020-85393024	17qE4	Mus musculus protein phosphatase 1B, magnesium dependent, beta isoform (Ppm1b), mRNA. XM_925494 XM_925495 XM_925496	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC106489; PP2CB	MGC106489; PP2CB
Mus musculus	RefSeq	ILMN_196288	ILMN_256871	PPM1B	NM_011151.1	NM_011151.1		19043	33859599	NM_011151.1	Ppm1b	NP_035281.1	ILMN_2752074	000360270	S	3156	TAGTCCCTGTCCGGGATGGTCTTCTGATGTCTCCTACAATGCGGTGAGCA	17	+	85416376-85416425	17qE4	Mus musculus protein phosphatase 1B, magnesium dependent, beta isoform (Ppm1b), mRNA. XM_925494 XM_925495 XM_925496	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC106489; PP2CB	MGC106489; PP2CB
Mus musculus	RefSeq	ILMN_196288	ILMN_256871	PPM1B	NM_011151.1	NM_011151.1		19043	33859599	NM_011151.1	Ppm1b	NP_035281.1	ILMN_2591381	001980619	S	3164	GTCCGGGATGGTCTTCTGATGTCTCCTACAATGCGGTGAGCAGAACCGAC	17	+	85416384-85416433	17qE4	Mus musculus protein phosphatase 1B, magnesium dependent, beta isoform (Ppm1b), mRNA. XM_925494 XM_925495 XM_925496	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC106489; PP2CB	MGC106489; PP2CB
Mus musculus	RefSeq	ILMN_221491	ILMN_221491	PIP5K3	NM_011086.2	NM_011086.2		18711	115529472	NM_011086.2	Pip5k3	NP_035216.2	ILMN_1260143	005550653	S	6250	GTGAAGCAATGGACAAGTATTTCTTGATGGTGCCAGACCACTGGACAGGG	1	+	65320265-65320314	1qC2	Mus musculus phosphatidylinositol-3-phosphate/phosphatidylinositol 5-kinase, type III (Pip5k3), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A small membrane-bounded vesicle that releases its contents by exocytosis in response to insulin stimulation; the contents are enriched in GLUT4, IRAP and VAMP2 [goid 32593] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [evidence IDA]	Pikfyve; Pip5k; p235; Pipk5k3; 5230400C17Rik	Pikfyve; Pip5k; p235; Pipk5k3; 5230400C17Rik
Mus musculus	RefSeq	ILMN_185931	ILMN_221491	PIP5K3	NM_011086.2	NM_011086.2		18711	115529472	NM_011086.2	Pip5k3	NP_035216.2	ILMN_2431212	000650358	S	9261	ATATGATTGACATGTTATTTAAAGATAACTACCATAGCTTCTTAGAGACT	1	+	65323276-65323325	1qC2	Mus musculus phosphatidylinositol-3-phosphate/phosphatidylinositol 5-kinase, type III (Pip5k3), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A small membrane-bounded vesicle that releases its contents by exocytosis in response to insulin stimulation; the contents are enriched in GLUT4, IRAP and VAMP2 [goid 32593] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [evidence IDA]	Pikfyve; Pip5k; p235; Pipk5k3; 5230400C17Rik	Pikfyve; Pip5k; p235; Pipk5k3; 5230400C17Rik
Mus musculus	RefSeq	ILMN_200403	ILMN_200403	LOC381693	XM_355668.1	XM_355668.1			38081647	XM_355668.1	LOC381693		ILMN_1223908	006100475	S	360	GCCAGGACCATAGAGAAGCTCAGCCCATGCAGCACCCCCTCAATGTCTCA										
Mus musculus	MEEBO	ILMN_194618	ILMN_194618	MJ-1000-56_266	MJ-1000-56_266						MJ-1000-56_266		ILMN_2508024	003140053	S	7	CTGTTCCTAAGGTTGCTGATTTGGTTGTTGGAGACCCATTGCAGGCAGGG										
Mus musculus	RefSeq	ILMN_215025	ILMN_215025	2610042L04RIK	NM_025940.3	NM_025940.3		545015	42475984	NM_025940.3	2610042L04Rik	NP_080216.3	ILMN_3014529	003310195	I	207	CTCTTAAGCATGTCAGAGTCCTAACCAACATTCCCCCTCAAAAGCACATG	14	-	6343457-6343506		Mus musculus RIKEN cDNA 2610042L04 gene (2610042L04Rik), mRNA.					
Mus musculus	Riken	ILMN_204622	ILMN_204622	XEDAR  EDA-A2R	ri|C330006C18|PX00075P17|AK049134|2153					AK049134	XEDAR  EDA-A2R		ILMN_1244622	001450730	S	1764	CAGAACAACCCAATCTCAGAATTAGACTAGAACCCAGGATTAGCAGTCCC										
Mus musculus	RefSeq	ILMN_198069	ILMN_311481	GM792	XM_001472438.1	XM_001472438.1		330230	149254677	XM_001472438.1	Gm792	XP_001472488.1	ILMN_1254177	005550167	S	1507	AAGCCCTATGCCTGCACCTACTGCTCCAAGTGCTTCAGCGAGAGCTCGGC	5	-	144049677-144049726	5qG2	PREDICTED: Mus musculus gene model 792, (NCBI) (Gm792), mRNA.					
Mus musculus	Riken	ILMN_206779	ILMN_206779	E030007N04RIK	ri|E030007N04|PX00204O12|AK086880|2261					AK086880	E030007N04Rik		ILMN_1226755	001260092	S	1877	CTGCTCCTACTGGCTCTGACTGGACAGGCGCCACCATGCTAACCAAGTAG										
Mus musculus	RefSeq	ILMN_224254	ILMN_252846	TGM3	NM_009374.2	NM_009374.2		21818	124001550	NM_009374.2	Tgm3	NP_033400.2	ILMN_2777363	000730164	S	1846	ATGTGCGGAAGCCCGTGAACGTGCAGATGCTTTTCTCCAACCCCCTGGAC	2	+	129873440-129873489	2qF1	Mus musculus transglutaminase 3, E polypeptide (Tgm3), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence TAS]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a hair cell [goid 35315] [evidence TAS]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence TAS]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence ISS]	MGC150256; AI893889; MGC150257	MGC150256; AI893889; MGC150257
Mus musculus	RefSeq	ILMN_214050	ILMN_214050	PEF1	NM_026441.4	NM_026441.4		67898	146149299	NM_026441.4	Pef1	NP_080717.2	ILMN_2643723	007050382	S	1138	ATTGGCTGCCTACTTGTCATCCCTCACCGAGACCATCGGGTCAGACGAGC				4qD2.2	Mus musculus penta-EF hand domain containing 1 (Pef1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Peflin; 2600002E23Rik	Peflin; 2600002E23Rik
Mus musculus	RefSeq	ILMN_211352	ILMN_211352	RECQL4	NM_058214.2	NM_058214.2		79456	110815827	NM_058214.2	Recql4	NP_478121.2	ILMN_3157773	003840639	A	3297	GCAGTCTAATGAGGAGCACAGCAATCAGGTGAAGACCCTGGTCAGCTACT	15	-	76534743-76534792	15qD3	Mus musculus RecQ protein-like 4 (Recql4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of sister chromatid cohesion [goid 45875] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211352	ILMN_211352	RECQL4	NM_058214.2	NM_058214.2		79456	110815827	NM_058214.2	Recql4	NP_478121.2	ILMN_2614945	004390170	S	3552	GTATGGGCTGGACCGGCGCTTCTGGAGGAAGTACCTACACCTGGACTTTC	15	-	76534220-76534269	15qD3	Mus musculus RecQ protein-like 4 (Recql4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of sister chromatid cohesion [goid 45875] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211352	ILMN_211352	RECQL4	NM_058214.2	NM_058214.2		79456	110815827	NM_058214.2	Recql4	NP_478121.2	ILMN_3078499	002850324	I	1955	AGCATATGGGGGTGCGCTGCTTCTTGGGTCTCACAGCCACAGCCACACGA	15	-	76536708-76536757	15qD3	Mus musculus RecQ protein-like 4 (Recql4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of sister chromatid cohesion [goid 45875] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216793	ILMN_216793	SNAPC4	NM_172339.2	NM_172339.2		227644	142361207	NM_172339.2	Snapc4	NP_758842.1	ILMN_2675433	006330161	S	4031	GGACTCGACGTGCTCGGCATTCCCGGAGATAGAGGTTGCTTTGAGCAGCA	2	-	26219159-26219177:26219178-26219208	2qA3	Mus musculus small nuclear RNA activating complex, polypeptide 4 (Snapc4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC59524; 5730436L13Rik	MGC59524; 5730436L13Rik
Mus musculus	RefSeq	ILMN_186811	ILMN_318103	LOC100048361	XM_001480088.1	XM_001480088.1		100048361	149267983	XM_001480088.1	LOC100048361	XP_001480138.1	ILMN_1236523	006420463	S	418	TGATGTTGCCAAGAAGTCTATTAGGATCTGCTGTGACTTGTATAGAGGCC					PREDICTED: Mus musculus similar to glycine tyrosine-rich hair keratin protein (LOC100048361), mRNA.					
Mus musculus	RefSeq	ILMN_201552	ILMN_201552	ZDHHC19	NM_199309.2	NM_199309.2		245308	118130915	NM_199309.2	Zdhhc19	NP_955013.1	ILMN_1251819	007050575	S	660	CACCTGCCTGACATTCCTATTTCGCACAAGGCATCTGCCCTTCTCCCTGG	16	+	32499171-32499220	16qB3	Mus musculus zinc finger, DHHC domain containing 19 (Zdhhc19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm616; MGC58833	Gm616; MGC58833
Mus musculus	RefSeq	ILMN_201552	ILMN_201552	ZDHHC19	NM_199309.2	NM_199309.2		245308	118130915	NM_199309.2	Zdhhc19	NP_955013.1	ILMN_3122480	000010014	A	454	AACCAAAGGGCTTTCCGCCTGGAATGGTGCCCCAAGTGCCTCTTCCATCG	16	+	32498442-32498491	16qB3	Mus musculus zinc finger, DHHC domain containing 19 (Zdhhc19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm616; MGC58833	Gm616; MGC58833
Mus musculus	RefSeq	ILMN_201552	ILMN_201552	ZDHHC19	NM_199309.2	NM_199309.2		245308	118130915	NM_199309.2	Zdhhc19	NP_955013.1	ILMN_3046887	006370044	I	1189	AGACTCTCCCCAGTGCACACAGAGCCAGGACCACCTGAACTTCCTTCCGC	16	+	32507179-32507228	16qB3	Mus musculus zinc finger, DHHC domain containing 19 (Zdhhc19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm616; MGC58833	Gm616; MGC58833
Mus musculus	RefSeq	ILMN_200141	ILMN_201552	ZDHHC19	NM_199309.2	NM_199309.2		245308	118130915	NM_199309.2	Zdhhc19	NP_955013.1	ILMN_2537730	001940750	S	121	GCTGTGTACTCTGCCCTGGCCATGCCTTTCTTAAAGGATGCTGTGACACT	16	+	32497152-32497172:32497173-32497201	16qB3	Mus musculus zinc finger, DHHC domain containing 19 (Zdhhc19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm616; MGC58833	Gm616; MGC58833
Mus musculus	MEEBO	ILMN_192156	ILMN_192156	KLF12	scl45212.1.365_19				46048262	NM_010636	Klf12		ILMN_2737129	003290672	S	1809	GAAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCTCATGCCATC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_192156	ILMN_192156	KLF12	scl45212.1.365_19				46048262	NM_010636	Klf12		ILMN_2485526	004280609	S	15	AGTTTAAACCTTTATCTGTATGCATTTGTATAATTATCTGAATGAAGGCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_188467	ILMN_314522	1700066J24RIK	XM_001477444.1	XM_001477444.1		76992	149252241	XM_001477444.1	1700066J24Rik	XP_001477494.1	ILMN_1244912	000630255	S	370	AGAGACACTCTGGCCGCACTGGCTCAGTGAGAGGAGGCTCGTGGGTCCGA				4qA5	PREDICTED: Mus musculus RIKEN cDNA 1700066J24 gene (1700066J24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222154	ILMN_222154	RCC1	NM_133878.2	NM_133878.2		100088	118129804	NM_133878.2	Rcc1	NP_598639.1	ILMN_2745425	005720626	S	2060	GAGTGGAGGGGCGGAGGCTGGTCCTAAGGAAAGTAACAGTGGCTGAGAAA	4	-	131887924-131887973	4qD2.3	Mus musculus regulator of chromosome condensation 1 (Rcc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	Chc1; AI326872; 4931417M11Rik	Chc1; AI326872; 4931417M11Rik
Mus musculus	RefSeq	ILMN_219375	ILMN_219375	NUDT7	NM_024446.3	NM_024446.3		67528	142372993	NM_024446.3	Nudt7	NP_077766.2	ILMN_1253709	001010008	S	1688	ATCTAAACTTTGGCGGTAACTATCAGTGATGGTACAGTCCCTTGAGCTGC	8	+	116659205-116659233:116659234-116659254	8qE1	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 7 (Nudt7), transcript variant 2, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways involving a nucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with diphosphate on its glycose moiety [goid 9132] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15938] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated [goid 46356] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + H2O = CoA + acetate [goid 3986] [evidence IDA]	2210404C19Rik; 1300007B24Rik	2210404C19Rik; 1300007B24Rik
Mus musculus	MEEBO	ILMN_189595	ILMN_189595	TM4SF1	scl017112.1_33	NM_008536.2			31560671	NM_008536.2	Tm4sf1		ILMN_2462650	007610477	S	1	GGACTGTTCTCAGCATAGCTGAGATAAACTCTTCAGTGTTTGAGATAAAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_202961	ILMN_202961	NR2E3	ri|A930035N01|PX00067H11|AK044718|1915					AK044718	Nr2e3		ILMN_1212890	001510577	S	560	GTGGTGGGCACGGTGAAGTGGGAAAGGCAGGAGAGAAAATGGCATCACTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of rhodopsin gene expression [goid 45872] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199678	ILMN_199678	LOC382874	XM_356722.1	XM_356722.1			38075965	XM_356722.1	LOC382874		ILMN_1214191	000870170	S	18	CACTGAACCTCATAATCATACCCACCTTCCACAGGCCATTTCCACCAAGG										
Mus musculus	RefSeq	ILMN_239425	ILMN_239425	D12ERTD647E	NM_194069.1	NM_194069.1		52668	34732722	NM_194069.1	D12Ertd647e	NP_919045.1	ILMN_3125606	000160437	A	556	CTCATGGGATCAGAGGTGGCAGACATGGCGACAGAGGTGGCAGATATGGC	12	+	104678265-104678314	12qE	Mus musculus DNA segment, Chr 12, ERATO Doi 647, expressed (D12Ertd647e), transcript variant 5, mRNA.				2900026P10Rik; 1110013J02Rik; ISG12a; MGC149996	2900026P10Rik; 1110013J02Rik; ISG12a; MGC149996
Mus musculus	RefSeq	ILMN_195045	ILMN_229859	LOC672339	XR_003816.1	XR_003816.1		672339	94378737	XR_003816.1	LOC672339		ILMN_1258680	004570408	S	24	CAGCTTCCTGCTAATGAGTGCCTCAGTCATAATGTCCAGAGGACAAATTG					PREDICTED: Mus musculus similar to Ig kappa chain V-IV region S107B precursor (LOC672339), mRNA.					
Mus musculus	MEEBO	ILMN_223882	ILMN_223882	DUSP23	scl15914.2_382				38074114	XM_129566	Dusp23		ILMN_1252812	004830253	S	1346	CGTCCCCAGCCTCAGACCAACGAATGCTGAAACTGAGTCTTGGTGGTTTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187961	ILMN_245985	WSB2	NM_021539.4	NM_021539.4		59043	142369522	NM_021539.4	Wsb2	NP_067514.2	ILMN_2512206	002900255	S	2073	CTTGTGCTGTCTGTCACATGTGTTTGTCTCTGCTGCTTGACCTCATGGGA	5	+	117828263-117828312	5qF	Mus musculus WD repeat and SOCS box-containing 2 (Wsb2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		AA673511; Swip2; WSB-2	AA673511; Swip2; WSB-2
Mus musculus	RefSeq	ILMN_223931	ILMN_241214	LOC669001	XM_972667.1	XM_972667.1		669001	94388274	XM_972667.1	LOC669001	XP_977761.1	ILMN_1256102	000580044	S	3126	CTTGACTCCCTGCTTGCTGCTTTAGGGGAGCCAGTCCCTTGTCATTTACT					PREDICTED: Mus musculus similar to Tumor necrosis factor receptor superfamily member EDAR precursor (Anhidrotic ectodysplasin receptor 1) (Ectodysplasin-A receptor) (Ectodermal dysplasia receptor) (Downless) (LOC669001), mRNA.					
Mus musculus	MEEBO	ILMN_184376	ILMN_184376	5330401F18RIK	scl0319219.1_262						5330401F18Rik		ILMN_2418143	006480619	S	9	GCTCACACTAAAATACTTTTAAAGGAGCTCAGACTTCTGGCACCACGCTC										
Mus musculus	RefSeq	ILMN_223933	ILMN_317312	LOC100048556	XM_001480891.1	XM_001480891.1		100048556	149262246	XM_001480891.1	LOC100048556	XP_001480941.1	ILMN_3161805	002510333	S	187	CCGGAAGCTGAAGAGCTACAGGAGAATCACAAGCAGCCAGTGTCCCCGGG					PREDICTED: Mus musculus similar to monocyte chemoattractant protein-5, transcript variant 1 (LOC100048556), mRNA.					
Mus musculus	RefSeq	ILMN_223933	ILMN_317312	LOC100048556	XM_001480891.1	XM_001480891.1		100048556	149262246	XM_001480891.1	LOC100048556	XP_001480941.1	ILMN_2771766	001990221	S	320	TTGGATAAGACGTCTCAAACCTTCATCCTTGAACCTTCATGTCTAGGCTG					PREDICTED: Mus musculus similar to monocyte chemoattractant protein-5, transcript variant 1 (LOC100048556), mRNA.					
Mus musculus	RefSeq	ILMN_209821	ILMN_209821	GDI1	NM_010273.3	NM_010273.3		14567	145966825	NM_010273.3	Gdi1	NP_034403.1	ILMN_1228316	003060192	S	1113	CCAGGTCAACAGGAAGTCAGACATCTATGTGTGCATGATCTCCTATGCGC				XqA7.3	Mus musculus guanosine diphosphate (GDP) dissociation inhibitor 1 (Gdi1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]	MGC21593; GDIA; GDIalpha	MGC21593; GDIA; GDIalpha
Mus musculus	RefSeq	ILMN_209821	ILMN_209821	GDI1	NM_010273.3	NM_010273.3		14567	145966825	NM_010273.3	Gdi1	NP_034403.1	ILMN_2632299	000430768	S	1078	GATGCCAATTCCTGCCAAATTATCATCCCTCAGAACCAGGTCAACAGGAA				XqA7.3	Mus musculus guanosine diphosphate (GDP) dissociation inhibitor 1 (Gdi1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]	MGC21593; GDIA; GDIalpha	MGC21593; GDIA; GDIalpha
Mus musculus	RefSeq	ILMN_209821	ILMN_209821	GDI1	NM_010273.3	NM_010273.3		14567	145966825	NM_010273.3	Gdi1	NP_034403.1	ILMN_2599532	005360619	S	2281	CCCTGCCCCATGCCTTTTCCTTTAGTGGTGGGAAACCCTTACCTTGCAAA				XqA7.3	Mus musculus guanosine diphosphate (GDP) dissociation inhibitor 1 (Gdi1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]	MGC21593; GDIA; GDIalpha	MGC21593; GDIA; GDIalpha
Mus musculus	RefSeq	ILMN_209821	ILMN_209821	GDI1	NM_010273.3	NM_010273.3		14567	145966825	NM_010273.3	Gdi1	NP_034403.1	ILMN_2630975	005340674	S	1076	ATGATGCCAATTCCTGCCAAATTATCATCCCTCAGAACCAGGTCAACAGG				XqA7.3	Mus musculus guanosine diphosphate (GDP) dissociation inhibitor 1 (Gdi1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]	MGC21593; GDIA; GDIalpha	MGC21593; GDIA; GDIalpha
Mus musculus	Riken	ILMN_204335	ILMN_204335	7630403J24RIK	ri|7630403J24|PX00060D06|AK033075|2078					AK033075	7630403J24Rik		ILMN_1259346	000940296	S	1832	GACCATGACTCCCCCCCTCAATCTCTCTTGGAAATTATGCACGGACTAGC										
Mus musculus	RefSeq	ILMN_215572	ILMN_215572	MOBKL2C	NM_175308.4	NM_175308.4		100465	146198753	NM_175308.4	Mobkl2c	NP_780517.1	ILMN_2661168	004590059	S	71	TCACAGGCCGGAGGACGACCGGCGCGTTGCGGTGTGGCCGCAGGGACAGA				4qD1	Mus musculus MOB1, Mps One Binder kinase activator-like 2C (yeast) (Mobkl2c), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW822253; MOB3C; D130076I06Rik	AW822253; MOB3C; D130076I06Rik
Mus musculus	RefSeq	ILMN_210009	ILMN_210009	ACAP3	NM_207223.1	NM_207223.1		140500	46402196	NM_207223.1	Acap3	NP_997106.1	ILMN_1236232	007550364	S	3752	GCTGGTACTCTCCACCCTGTGCCCAATGTTCTTTGTTACTGAGAGGATTT	4	+	155280799-155280848	4qE2	Mus musculus ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 (Acap3), mRNA.				mKIAA1716; Kiaa1716-hp	mKIAA1716; Kiaa1716-hp
Mus musculus	RefSeq	ILMN_210009	ILMN_210009	ACAP3	NM_207223.1	NM_207223.1		140500	46402196	NM_207223.1	Acap3	NP_997106.1	ILMN_2962083	001580017	S	3949	CTCTGATATAGGTCCAGTGGTCCCTTATGTGGGGGGCCCACCAATGCCTT	4	+	155280996-155281045	4qE2	Mus musculus ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 (Acap3), mRNA.				mKIAA1716; Kiaa1716-hp	mKIAA1716; Kiaa1716-hp
Mus musculus	RefSeq	ILMN_199938	ILMN_210009	ACAP3	NM_207223.1	NM_207223.1		140500	46402196	NM_207223.1	Acap3	NP_997106.1	ILMN_2537023	005490241	S	181	GCCAAACCACTCCGAAGCCCAACCGCCGAGGCCGGCCCAGCTCCCAGACC	4	+	155266164-155266213	4qE2	Mus musculus ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 (Acap3), mRNA.				mKIAA1716; Kiaa1716-hp	mKIAA1716; Kiaa1716-hp
Mus musculus	MEEBO	ILMN_190822	ILMN_190822	WBSCR5	scl25940.13_350	NM_022964.2			45496829	NM_022964.2	Wbscr5		ILMN_2505319	004070370	S	15	CTACCCCAAGTCACAACCCTTTCCCCATGTCTGTTTATCACCAGGGAACA										
Mus musculus	RefSeq	ILMN_220482	ILMN_220482	OLFR622	NM_147083.1	NM_147083.1		259087	22128804	NM_147083.1	Olfr622	NP_667294.1	ILMN_2722641	001050681	S	859	GCGGTTAATCCAGTGGTGTATGGTGTCAAGACCAAGCAAATTCGTGATCG	7	-	110787744-110787793	7qE3	Mus musculus olfactory receptor 622 (Olfr622), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR26-1	MOR26-1
Mus musculus	RefSeq	ILMN_215379	ILMN_215379	RCCD1	NM_173445.1	NM_173445.1		269955	27734101	NM_173445.1	Rccd1	NP_775621.1	ILMN_2838629	001030630	S	1957	CTTGAAGTAAGGGCTGTGACATGTGGACCCTGGAATACCTATGTCTATGC	7	-	80190432-80190481	7qD3	Mus musculus RCC1 domain containing 1 (Rccd1), mRNA.				E430018M08Rik; 5830436H09	E430018M08Rik; 5830436H09
Mus musculus	Riken	ILMN_207322	ILMN_207322	4930471I01RIK	ri|4930471I01|PX00639F20|AK076802|904					AK076802	4930471I01Rik		ILMN_1249396	000460097	S	853	CTGCAAGCGGCTGGAAACTCTGGACTGCTCACATTACACGCATGACTCAG										
Mus musculus	RefSeq	ILMN_246119	ILMN_246119	SLC43A2	NM_173388.1	NM_173388.1		215113	27734185	NM_173388.1	Slc43a2	NP_775564.1	ILMN_2958464	004010730	S	4072	TGCTGTCTGAGTGGTGGAGCTGAGAGCTGTGGAAACATGGCACAGTCCCG	11	+	75381977-75382026	11qB5	Mus musculus solute carrier family 43, member 2 (Slc43a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]	Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]	BC042513; 7630402D21Rik; Pitpn; Lat4; MGC28931	BC042513; 7630402D21Rik; Pitpn; Lat4; MGC28931
Mus musculus	RefSeq	ILMN_184205	ILMN_246119	SLC43A2	NM_173388.1	NM_173388.1		215113	27734185	NM_173388.1	Slc43a2	NP_775564.1	ILMN_2749632	004880528	S	3802	GTCTGTGAAAAGGTCTAGTGGGGTACGCTGAGTTAAAGTCAGACCTGCCA	11	+	75381707-75381756	11qB5	Mus musculus solute carrier family 43, member 2 (Slc43a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]	Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]	BC042513; 7630402D21Rik; Pitpn; Lat4; MGC28931	BC042513; 7630402D21Rik; Pitpn; Lat4; MGC28931
Mus musculus	RefSeq	ILMN_196140	ILMN_226867	MYL6B	NM_172259.1	NM_172259.1		216459	26986554	NM_172259.1	Myl6b	NP_758463.1	ILMN_2737183	002710100	S	768	TTGAGAGGCAAGGGTCCTCGATCCACCAGATAGAAGCGCAGGCAGTGCGT	10	-	127931707-127931721:127931646-127931680	10qD3	Mus musculus myosin, light polypeptide 6B (Myl6b), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A portmanteau term for myosins other than myosin II [goid 16461] [evidence TAS]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence TAS]; The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated [goid 30049] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence TAS]	MLC1SA; BC037527; 5730437E04Rik; MGC41229	MLC1SA; BC037527; 5730437E04Rik; MGC41229
Mus musculus	Riken	ILMN_205770	ILMN_205770	NPAS3	ri|D030044N15|PX00180H08|AK050957|2983					AK050957	Npas3		ILMN_1242402	005560243	S	2751	GGCACAGCCTGAACCCAGGATGCTCTCTAGTGCAATCTACTCCCAACGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Female behaviors associated with the care and rearing of offspring [goid 42711] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213315	ILMN_213315	ABCF2	NM_013853.1	NM_013853.1		27407	23956077	NM_013853.1	Abcf2	NP_038881.1	ILMN_1242066	001500110	S	2412	CTATGTGTCATCTACCAAGTGTCCAATAAAAGAGGAAGCTACAGACCCCC				5qA3	Mus musculus ATP-binding cassette, sub-family F (GCN20), member 2 (Abcf2), nuclear gene encoding mitochondrial protein, mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	E430001O06; 0710005O05Rik; Drr3	E430001O06; 0710005O05Rik; Drr3
Mus musculus	RefSeq	ILMN_213315	ILMN_213315	ABCF2	NM_013853.1	NM_013853.1		27407	23956077	NM_013853.1	Abcf2	NP_038881.1	ILMN_2789544	006660598	S	2313	GCCAGCCCATCAACCCCGTTCCTTATTGCTTCTGGTTTGGAGCTCTGGGC	5	-	24071261-24071310	5qA3	Mus musculus ATP-binding cassette, sub-family F (GCN20), member 2 (Abcf2), nuclear gene encoding mitochondrial protein, mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	E430001O06; 0710005O05Rik; Drr3	E430001O06; 0710005O05Rik; Drr3
Mus musculus	RefSeq	ILMN_213315	ILMN_213315	ABCF2	NM_013853.1	NM_013853.1		27407	23956077	NM_013853.1	Abcf2	NP_038881.1	ILMN_1249522	002370192	S	1221	TCCCACCGTGCGGTAAGATCCCACCACCTGTCATTATGGTGCAGAACGTG	5	-	24074409-24074458	5qA3	Mus musculus ATP-binding cassette, sub-family F (GCN20), member 2 (Abcf2), nuclear gene encoding mitochondrial protein, mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	E430001O06; 0710005O05Rik; Drr3	E430001O06; 0710005O05Rik; Drr3
Mus musculus	RefSeq	ILMN_213315	ILMN_213315	ABCF2	NM_013853.1	NM_013853.1		27407	23956077	NM_013853.1	Abcf2	NP_038881.1	ILMN_2669034	000110768	S	1205	GACGCTGTCATTTTATTTCCCACCGTGCGGTAAGATCCCACCACCTGTCA	5	-	24074425-24074474	5qA3	Mus musculus ATP-binding cassette, sub-family F (GCN20), member 2 (Abcf2), nuclear gene encoding mitochondrial protein, mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	E430001O06; 0710005O05Rik; Drr3	E430001O06; 0710005O05Rik; Drr3
Mus musculus	MEEBO	ILMN_218592	ILMN_218592	NKX2-3	scl53104.2_253	XM_129268.4			28527223	XM_129268.4	Nkx2-3		ILMN_2697760	001820605	S	1972	AGGTTGTCGCCAGGTTGGTTTCCTTTCTGTTTTGTATTCTGTATTCCGCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process, occurring during the post-embryonic phase, by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48621] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48565] [evidence IMP]; The process whose specific outcome is the progression of mucosal- associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48537] [evidence IMP]; The process whereby a B cell acquires the specialized features of a plasma cell. A plasma cell is a lymphocyte which develops from a B cell and produces high amounts of antibody [goid 2317] [evidence IMP]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell [goid 43367] [evidence IMP]; The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1776] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]; The process by which the anatomical structures of a gland are generated and organized. Morphogenesis pertains to the creation of form [goid 22612] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48541] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IMP]; The process by which the anatomical structures of a follicular epithelium are generated and organized. Morphogenesis pertains to the creation of form [goid 16333] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197138	ILMN_320297	4933400N17RIK	XM_001478116.1	XM_001478116.1		619289	149233760	XM_001478116.1	4933400N17Rik	XP_001478166.1	ILMN_1246518	006330554	S	504	CAACGCGAACGTGCAAGGTGGTTTGCTGGAGTAGGGTGTGAGGAAGCAGG				1qB	PREDICTED: Mus musculus RIKEN cDNA 4933400N17 gene (4933400N17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221944	ILMN_221944	2410042D21RIK	NM_024254.2	NM_024254.2		72425	31560075	NM_024254.2	2410042D21Rik	NP_077216.1	ILMN_2982985	002760131	S	2687	AGCCTGCAGTTTTCACTGTCTTATTGAACCATTTGGGCAGGTTGATGTGG	2	+	112214880-112214929	2qE3	Mus musculus RIKEN cDNA 2410042D21 gene (2410042D21Rik), mRNA.				AA166487; AI467442; AA473307	AA166487; AI467442; AA473307
Mus musculus	RefSeq	ILMN_221944	ILMN_221944	2410042D21RIK	NM_024254.2	NM_024254.2		72425	31560075	NM_024254.2	2410042D21Rik	NP_077216.1	ILMN_1229286	007560132	S	2401	AGCAGTGACTACTGAGACCCCCAGCCCCCCTGCCCTCCAGTGTTATTTTT	2	+	112214594-112214643	2qE3	Mus musculus RIKEN cDNA 2410042D21 gene (2410042D21Rik), mRNA.				AA166487; AI467442; AA473307	AA166487; AI467442; AA473307
Mus musculus	RefSeq	ILMN_212882	ILMN_212882	MSMB	NM_020597.2	NM_020597.2		17695	118130511	NM_020597.2	Msmb	NP_065622.1	ILMN_1212724	007040253	S	329	GACCTGTCGAGTTGACAGCTGGACTATGTAAATGTGCTTCGTGTGGGCCC	14	+	32971352-32971382:32971383-32971401	14qB	Mus musculus beta-microseminoprotein (Msmb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			PIP; beta-MSP; PSP94	PIP; beta-MSP; PSP94
Mus musculus	RefSeq	ILMN_205883	ILMN_315243	LOC667964	XR_032344.1	XR_032344.1		667964	149260693	XR_032344.1	LOC667964		ILMN_2575930	007610110	S	616	CATGAGAAAGGATTTACCAAGTCTATTGGAGATGGATAAAAATCTTCAGG	10	+	39382399-39382448	10qB1	PREDICTED: Mus musculus similar to C130022K22Rik protein (LOC667964), misc RNA.					
Mus musculus	RefSeq	ILMN_209447	ILMN_209447	SURF4	NM_011512.2	NM_011512.2		20932	31981472	NM_011512.2	Surf4	NP_035642.1	ILMN_2595846	001400468	S	3093	GGGGTGCGCCTGGGACGGGAGAAAACAATGATACACATATTGGTTTGGCA	2	-	26775698-26775747	2qA3	Mus musculus surfeit gene 4 (Surf4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			AL033373; AL033340; Surf-4	AL033373; AL033340; Surf-4
Mus musculus	RefSeq	ILMN_213211	ILMN_213211	OLFR78	NM_130866.3	NM_130866.3		170639	142362165	NM_130866.3	Olfr78	NP_570936.1	ILMN_2738511	004760209	S	2028	CAGATCAGAACACGGGTTCTGGCTATGTTCAAGATCAGCTGTGACAAGGA	7	-	109890577-109890626	7qE3	Mus musculus olfactory receptor 78 (Olfr78), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISS]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISO]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOL2.3; PSGR; RA1c; 4633402A21Rik; MOR18-2	MOL2.3; PSGR; RA1c; 4633402A21Rik; MOR18-2
Mus musculus	RefSeq	ILMN_213211	ILMN_213211	OLFR78	NM_130866.3	NM_130866.3		170639	142362165	NM_130866.3	Olfr78	NP_570936.1	ILMN_2634768	004850019	S	3231	GTTGAATGAACTTATGTGATGTAGAATATTCCCTTCATACTGAGTGGATG	7	-	109889374-109889423	7qE3	Mus musculus olfactory receptor 78 (Olfr78), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISS]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISO]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOL2.3; PSGR; RA1c; 4633402A21Rik; MOR18-2	MOL2.3; PSGR; RA1c; 4633402A21Rik; MOR18-2
Mus musculus	RefSeq	ILMN_221267	ILMN_221267	ANKRD55	NM_029898.2	NM_029898.2		77318	142363812	NM_029898.2	Ankrd55	NP_084174.1	ILMN_2733230	006980458	S	2046	GTGAGATTACTCTAGTTTATATGAGCAAAGTCTTAATTTAGTAAGCTGCA	13	+	113173844-113173893	13qD2.2	Mus musculus ankyrin repeat domain 55 (Ankrd55), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C030011J08Rik	C030011J08Rik
Mus musculus	RefSeq	ILMN_217410	ILMN_217410	9830102E05RIK	NM_177787.3	NM_177787.3		277898	118130508	NM_177787.3	9830102E05Rik	NP_808455.1	ILMN_2682892	001740411	S	1886	TAAACCATAAGTAATATGATGTTTAGATAATAAATGTGTATAGAATTCTG	6	-	137932419-137932468	6qG1	Mus musculus RIKEN cDNA 9830102E05 gene (9830102E05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	MEEBO	ILMN_196027	ILMN_196027	4930565B19RIK	scl10187.1.1_275						4930565B19Rik		ILMN_2520953	002630523	S	10	AGTTACCTGCCCCAGCTGCAGGGGGGGTTTCTAGCCCCTCTCAGCCAAGG										
Mus musculus	RefSeq	ILMN_255758	ILMN_255758	PIGQ	NM_011822.3	NM_011822.3		14755	118130030	NM_011822.3	Pigq	NP_035952.2	ILMN_2877507	000240661	S	2651	GTGATTGGATACCTGCCAACCTGGCTAGTGCTCCATGTATGAATAGGCCC	17	-	26063752-26063801	17qA3.3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class Q (Pigq), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol [goid 17176] [evidence IEA]	Gpi1h; Gpih; Gpi1; Gpi1p	Gpi1h; Gpih; Gpi1; Gpi1p
Mus musculus	MEEBO	ILMN_219755	ILMN_219755	D030016E14RIK	scl00320714.1_125	NM_177240.2			31343145	NM_177240.2	D030016E14Rik		ILMN_1229225	001030670	S	910	GTTCAGTCCCACGAGAAGTCCCCAATCAGGGATGTGAAGCTCACTGCGGG										
Mus musculus	MEEBO	ILMN_219755	ILMN_219755	D030016E14RIK	scl00320714.1_125	NM_177240.2			31343145	NM_177240.2	D030016E14Rik		ILMN_2713265	005420328	S	1796	CTATCTGAACAGTTGGCGGTGAACAGCTCCCTGGGGGAGAAGCAGCTCCA										
Mus musculus	RefSeq	ILMN_212719	ILMN_212719	CRYBA2	NM_021541.2	NM_021541.2		12958	133892777	NM_021541.2	Cryba2	NP_067516.1	ILMN_2629519	006960403	S	633	GTCCATTCGAAGAGTCCAGCATTAGGCTCCACATTCCCAGTCATCACCAG	1	-	74936537-74936562:74936563-74936586	1qC3	Mus musculus crystallin, beta A2 (Cryba2), mRNA.			The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	E130107M19Rik	E130107M19Rik
Mus musculus	RefSeq	ILMN_187578	ILMN_249986	CYTIP	NM_139200.4	NM_139200.4		227929	124378016	NM_139200.4	Cytip	NP_631939.1	ILMN_1251748	006650070	S	2005	CACCTCAGCTCGAAGTTCCTTGTTAGCTGTGCTTGTATTGTACTCTCACC	2	-	57985230-57985279	2qC1.1	Mus musculus cytohesin 1 interacting protein (Cytip), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	CYTIP; Cbp; A130053M09Rik; C80816; AI462064	CYTIP; Cbp; A130053M09Rik; C80816; AI462064
Mus musculus	RefSeq	ILMN_220403	ILMN_220403	PDE8B	NM_172263.1	NM_172263.1		218461	26986552	NM_172263.1	Pde8b	NP_758467.1	ILMN_2721613	005670121	S	3681	GGACCTTGGAGTATGTGGAAATTGGTACATGGGGAAGAAAGAGACAACTT	13	-	95794687-95794736	13qD1	Mus musculus phosphodiesterase 8B (Pde8b), mRNA.			Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]	B230331L10Rik; C030047E14Rik	B230331L10Rik; C030047E14Rik
Mus musculus	MEEBO	ILMN_185001	ILMN_185001	2610024H22RIK	scl17913.1_12						2610024H22Rik		ILMN_1217466	006100132	S	1	GAGACCTTGCTATGCTGTATAAGTTGTGTGACGGAGCAGTGTGAGTATGA										
Mus musculus	RefSeq	ILMN_201043	ILMN_242598	2310033E01RIK	NM_001037143.2	NM_001037143.2		641361	142372919	NM_001037143.2	2310033E01Rik	NP_001032220.1	ILMN_1245238	004220730	S	170	GCGTGGTCCTAGTGAGCGAGTCCAGCACAAAGGGCCGAAAGTCAGTGAAC	7	-	25330016-25330065	7qA3	Mus musculus RIKEN cDNA 2310033E01 gene (2310033E01Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [evidence IEA]		
Mus musculus	Riken	ILMN_207358	ILMN_207358	4931403I22RIK	ri|C030019F01|PX00665D14|AK081238|2779					AK081238	4931403I22Rik		ILMN_2587005	006860162	S	2138	TGCTGGCCATTCCAGAGTAGGATCTAGTAGTGATTCCATAGGTAGAAGCT										
Mus musculus	RefSeq	ILMN_217138	ILMN_217138	CYP2C70	NM_145499.1	NM_145499.1		226105	21703981	NM_145499.1	Cyp2c70	NP_663474.1	ILMN_1245514	004280722	S	1542	CCTGTCCTATGTACCTGCATCTGGTAGTCCTTTATGAATGGCAGGGATGC	19	-	40227953-40228002	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 70 (Cyp2c70), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213926	ILMN_213926	COL7A1	NM_007738.3	NM_007738.3		12836	115647998	NM_007738.3	Col7a1	NP_031764.2	ILMN_2901944	003290209	S	8894	AGCCGGGTCCTGCTGTGCTCCATTTGGTGCTAGAGTTGTGTGTGCACGTG	9	+	108886616-108886665	9qF2	Mus musculus collagen, type VII, alpha 1 (Col7a1), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	AW209154	AW209154
Mus musculus	RefSeq	ILMN_213926	ILMN_213926	COL7A1	NM_007738.3	NM_007738.3		12836	115647998	NM_007738.3	Col7a1	NP_031764.2	ILMN_2651234	007200689	S	7789	ATCCCTGGTTTCCGAGGAGACAAAGGAGATATTGGCTTCATGGGTCCCAG	9	+	108881865-108881914	9qF2	Mus musculus collagen, type VII, alpha 1 (Col7a1), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	AW209154	AW209154
Mus musculus	RefSeq	ILMN_222906	ILMN_222906	FGD4	NM_139233.1	NM_139233.1		224014	22296594	NM_139233.1	Fgd4	NP_631979.1	ILMN_1229698	006250221	S	2003	TATCACAGCTGTTAGAAATGGTATATAGGTGAAATAAAACCATCAGCCTC	16	-	16435954-16435982:16435983-16436003	16qA3	Mus musculus FYVE, RhoGEF and PH domain containing 4 (Fgd4), transcript variant beta, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; Formation of a microspike, a thin, stiff projection extended from the surface of a migrating cell [goid 30035] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence ISO]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]	Frabp; 9330209B17Rik; 9030023J02Rik; ZFYVE6	Frabp; 9330209B17Rik; 9030023J02Rik; ZFYVE6
Mus musculus	RefSeq	ILMN_222083	ILMN_222083	NPC2	NM_023409.4	NM_023409.4		67963	86198336	NM_023409.4	Npc2	NP_075898.1	ILMN_2744380	006040224	S	1286	CTCTCGTTCTTTGGTAGTTTTCATTAAAGCCAATACTTGGTTGCAGGTGC	12	-	86097435-86097484	12qD1	Mus musculus Niemann Pick type C2 (Npc2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISS]	The directed movement of cholesterol, cholest-5-en-3-beta-ol, within cells [goid 32367] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence ISS]	Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence ISS]	2700012J19Rik; HE1; AA408070; AU045843	2700012J19Rik; HE1; AA408070; AU045843
Mus musculus	RefSeq	ILMN_221418	ILMN_221418	MRPL12	NM_027204.2	NM_027204.2		56282	22164791	NM_027204.2	Mrpl12	NP_081480.2	ILMN_2883147	004640553	S	610	GCACCGTGGTTCTGGAGTGAGGCATGGTTATGAGGACTTACGGACTAGAG	11	+	120349729-120349748:120349749-120349778	11qE2	Mus musculus mitochondrial ribosomal protein L12 (Mrpl12), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence ISS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	Rpml12; MRP-L12; 0610034O11Rik; 1500031N16Rik	Rpml12; MRP-L12; 0610034O11Rik; 1500031N16Rik
Mus musculus	RefSeq	ILMN_214535	ILMN_312863	LOC100046996	XM_001477383.1	XM_001477383.1		100046996	149258632	XM_001477383.1	LOC100046996	XP_001477433.1	ILMN_2648991	007210564	S	1703	GCTGTGCGCTGGGAGTGACGATTGATTTGCAGTAACCTGAATCTCGGTGC					PREDICTED: Mus musculus similar to farnesyltransferase alpha subunit (LOC100046996), mRNA.					
Mus musculus	RefSeq	ILMN_216774	ILMN_216774	KLK8	NM_008940.2	NM_008940.2		259277	133893243	NM_008940.2	Klk8	NP_032966.1	ILMN_2675232	006200446	S	1193	CCGAGAAACCTGGAGTCTACACCAAAATCTGCCGCTACACTACCTGGATC	7	+	51059063-51059112	7qB4	Mus musculus kallikrein related-peptidase 8 (Klk8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the physical form of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50807] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons [goid 31642] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IDA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites [goid 48812] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon regeneration [goid 48681] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]	Prss19; Nrpn; BSP1	Prss19; Nrpn; BSP1
Mus musculus	Riken	ILMN_207244	ILMN_207244	F830004G03RIK	ri|F830004G03|PL00004I16|AK089605|1396					AK089605	F830004G03Rik		ILMN_1223446	002710750	S	1313	TCTGTGGAGCCCAGAAATTGGGACTGGAGTTACAGACACTGTGTGACCTA										
Mus musculus	RefSeq	ILMN_213011	ILMN_213011	NKAIN4	NM_021426.3	NM_021426.3		58237	32129277	NM_021426.3	Nkain4	NP_067401.2	ILMN_1242188	005490619	S	804	TTTTTCCAAGTTCACCTTGGATACCAGTAAGGGGCGGGGGACACTGCAGG	2	-	180669568-180669617	2qH4	Mus musculus Na+/K+ transporting ATPase interacting 4 (Nkain4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AB030182; MGC102050	AB030182; MGC102050
Mus musculus	RefSeq	ILMN_209759	ILMN_209759	BAI2	NM_173071.1	NM_173071.1		230775	27414502	NM_173071.1	Bai2	NP_775094.1	ILMN_2813724	001580114	S	4641	AGCCCCCAGAACCGCCAGACGGCGACTTCCAGACAGAGGTGTGAGTGCCA	4	+	129699536-129699582:129699583-129699585	4qD2.2	Mus musculus brain-specific angiogenesis inhibitor 2 (Bai2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 16527] [evidence IDA]		
Mus musculus	Riken	ILMN_207280	ILMN_207280	G630034M02RIK	ri|G630034M02|PL00013K04|AK090282|2214					AK090282	G630034M02Rik		ILMN_1255117	003060747	S	2127	AGCTCCAGTCCGAGGGCGTAGACCCGCCGCCACTAACAAGCTAATATAAT										
Mus musculus	RefSeq	ILMN_220612	ILMN_220612	CDC34	NM_177613.2	NM_177613.2		216150	31341237	NM_177613.2	Cdc34	NP_808281.1	ILMN_2763115	004180386	S	238	CAAGCTCGCAGAAGGCGCTGCTGCTGGAACTGAAGGGGCTGCAGGAGGAG	10	+	79145177-79145226	10qC1	Mus musculus cell division cycle 34 homolog (S. cerevisiae) (Cdc34), mRNA. XM_922814 XM_922817		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	AI327276; UBE2R1	AI327276; UBE2R1
Mus musculus	MEEBO	ILMN_193026	ILMN_193026	BRUNOL4	scl51577.15_266				29789314	NM_133195	Brunol4		ILMN_2638849	004610709	S	1780	CGAGGGCTGTAACCTGCTCATCTACCATCTGCCCCAGGAGTTTGGGGACG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212085	ILMN_212085	CDC45L	NM_009862.1	NM_009862.1		12544	6753365	NM_009862.1	Cdc45l	NP_033992.1	ILMN_2919433	003400754	S	1819	CACAGTGACCGTGGTGGGCATCCCCCCAGAGACTGATAGCTCGGATAGAA	16	-	18795985-18796034	16qA3	Mus musculus cell division cycle 45 homolog (S. cerevisiae)-like (Cdc45l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]			
Mus musculus	RefSeq	ILMN_212085	ILMN_212085	CDC45L	NM_009862.1	NM_009862.1		12544	6753365	NM_009862.1	Cdc45l	NP_033992.1	ILMN_2622551	005390577	S	2046	TTCCTTATTTATATTTCCTGGCCACTATTCAGTTGTAAGATAACATTTGA	16	-	18794926-18794953:18795188-18795209	16qA3	Mus musculus cell division cycle 45 homolog (S. cerevisiae)-like (Cdc45l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]			
Mus musculus	RefSeq	ILMN_221375	ILMN_259960	CTNND1	NM_007615.4	NM_007615.4		12388	146231986	NM_007615.4	Ctnnd1	NP_031641.2	ILMN_1245767	005670521	S	392	CTGAGTCTAGACTGGGCTATTCTCTGTGCTAAACCAATCAATTACGGGCC				2qD	Mus musculus catenin (cadherin associated protein), delta 1 (Ctnnd1), transcript variant 1, mRNA.	A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA409437; P120; AU019353; Ctnnd; Catns; mKIAA0384	AA409437; P120; AU019353; Ctnnd; Catns; mKIAA0384
Mus musculus	RefSeq	ILMN_211681	ILMN_211681	SGTB	NM_144838.1	NM_144838.1		218544	21450230	NM_144838.1	Sgtb	NP_659087.1	ILMN_1219768	002710296	S	2132	GGCGTGTGCTTAGTAGGAAGAAATGACACGAGCTATCGATGGGAGGACTC	13	+	104930948-104930997	13qD1	Mus musculus small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta (Sgtb), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISA]	C630001O05Rik; MGC27660	C630001O05Rik; MGC27660
Mus musculus	RefSeq	ILMN_211681	ILMN_211681	SGTB	NM_144838.1	NM_144838.1		218544	21450230	NM_144838.1	Sgtb	NP_659087.1	ILMN_2847248	000870717	S	2429	AATGGCGGTGAGTCCCAGCACGTGGGAGGTAAGGGTCAGGACCAGGAATT	13	+	104931245-104931294	13qD1	Mus musculus small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta (Sgtb), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISA]	C630001O05Rik; MGC27660	C630001O05Rik; MGC27660
Mus musculus	RefSeq	ILMN_222718	ILMN_222718	VWA5B2	NM_182636.4	NM_182636.4		328643	146198831	NM_182636.4	Vwa5b2	NP_872574.2	ILMN_2753836	006020564	S	1804	ACAGGGCCTACCCTCGACAGATGTTCCTGATCACTGCTGCCTCGCCAACG				16qA3	Mus musculus von Willebrand factor A domain containing 5B2 (Vwa5b2), mRNA.				MGC62438; Gm931; Gm1738	MGC62438; Gm931; Gm1738
Mus musculus	RefSeq	ILMN_198831	ILMN_198831	LOC269919	XM_195647.2	XM_195647.2			38088590	XM_195647.2	LOC269919		ILMN_2533078	001500204	S	1227	CGTGGGCTCCTTCAGGCATCGATTGCAGCACCAGACCCTCAAAATGGTTA										
Mus musculus	RefSeq	ILMN_221294	ILMN_221294	KIR3DL2	NM_177748.2	NM_177748.2		245615	31343130	NM_177748.2	Kir3dl2	NP_808416.1	ILMN_1223916	005310170	S	1008	ACCTGCGCATTCTAACTGGGCTCTTAATGACCATGGTCCTTGTCATCATC	X	-	132984003-132984052	XqF1	Mus musculus killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2 (Kir3dl2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Kirl2	Kirl2
Mus musculus	RefSeq	ILMN_221294	ILMN_221294	KIR3DL2	NM_177748.2	NM_177748.2		245615	31343130	NM_177748.2	Kir3dl2	NP_808416.1	ILMN_2761691	000670743	S	1007	AACCTGCGCATTCTAACTGGGCTCTTAATGACCATGGTCCTTGTCATCAT	X	-	132984004-132984053	XqF1	Mus musculus killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2 (Kir3dl2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Kirl2	Kirl2
Mus musculus	RefSeq	ILMN_219789	ILMN_219789	OLFR549	NM_147101.1	NM_147101.1		259105	22128766	NM_147101.1	Olfr549	NP_667312.1	ILMN_2798097	001690356	S	569	CCTGTGCTGATATTCGCGTCAATGTTTGGTATGGCTTGTCTGTCCTCCTC	7	+	109703368-109703417	7qE3	Mus musculus olfactory receptor 549 (Olfr549), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR31-3	MOR31-3
Mus musculus	RefSeq	ILMN_219789	ILMN_219789	OLFR549	NM_147101.1	NM_147101.1		259105	22128766	NM_147101.1	Olfr549	NP_667312.1	ILMN_2713593	002230156	S	263	GGTTTCGTGCGGGAGCGATTTCCCTTGATGGCTGTGTCACTCAAATCTTC	7	+	109703062-109703111	7qE3	Mus musculus olfactory receptor 549 (Olfr549), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR31-3	MOR31-3
Mus musculus	RefSeq	ILMN_197195	ILMN_249646	LOC667488	XM_990847.2	XM_990847.2		667488	149264216	XM_990847.2	LOC667488	XP_995941.2	ILMN_1225228	004070520	S	1569	CAGCCCACCACGCACCCAGAATATGCCATTTGGAAAGAACTCGGGGGACG	13	+	49861076-49861125	13qA5	PREDICTED: Mus musculus hypothetical LOC667488 (LOC667488), mRNA.					
Mus musculus	RefSeq	ILMN_219052	ILMN_219052	NUP153	NM_175749.1	NM_175749.1		218210	30519890	NM_175749.1	Nup153	NP_786925.1	ILMN_2703583	007550377	S	5057	TTGTTAGATCTAGTTCATTCTCCACTTAATAAGTATATGCTATTTCTATA	13	-	46775923-46775972	13qA5	Mus musculus nucleoporin 153 (Nup153), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B130015D15Rik; C88147	B130015D15Rik; C88147
Mus musculus	Riken	ILMN_204004	ILMN_204004	EPHA3	ri|A630047N16|PX00146I21|AK041935|2340					AK041935	Epha3		ILMN_2561630	004070382	S	2263	CTGTCCATGTCACTCAAAGGTAGATTAAAATGTGTCTATAACTGGCAAAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199762	ILMN_199762	LOC383898	XM_358735.1	XM_358735.1			38076967	XM_358735.1	LOC383898		ILMN_2536395	002810452	S	292	TGGAGGACTATGGAAGGAGATAGGGAAGGCTTCCCCGAAGAAAGGGTGCG										
Mus musculus	RefSeq	ILMN_198659	ILMN_254693	LOC237008	XR_003575.1	XR_003575.1		237008	94409282	XR_003575.1	LOC237008		ILMN_2532471	002630202	S	540	GCCGTCCAAAGGGGACGATGTCACAATTGAGGGGCCGACACAAGAAGACT				XqE1	PREDICTED: Mus musculus similar to S-methyl-5-thioadenosine phosphorylase (5-methylthioadenosine phosphorylase) (MTA phosphorylase) (MTAPase) (LOC237008), mRNA.					
Mus musculus	RefSeq	ILMN_210290	ILMN_310389	1700047I17RIK2	NM_001100116.1	NM_001100116.1		100101807	153945762	NM_001100116.1	1700047I17Rik2	NP_001093586.1	ILMN_2655154	002230291	S	3642	TGATCTCTGCAAAATAGACTTCTTCATAAAGATGCTTGAATGCTGCATGC					Mus musculus RIKEN cDNA 1700047I17 gene 2 (1700047I17Rik2), mRNA.				MGC61221	MGC61221
Mus musculus	RefSeq	ILMN_221070	ILMN_310389	1700047I17RIK2	NM_001100116.1	NM_001100116.1		100101807	153945762	NM_001100116.1	1700047I17Rik2	NP_001093586.1	ILMN_1229119	006450035	S	3593	GCATGCAGCATTCAAGCATCTTTATGAAGAAGTCTATTTTGCAGAGATCA					Mus musculus RIKEN cDNA 1700047I17 gene 2 (1700047I17Rik2), mRNA.				MGC61221	MGC61221
Mus musculus	RefSeq	ILMN_221070	ILMN_310389	1700047I17RIK2	NM_001100116.1	NM_001100116.1		100101807	153945762	NM_001100116.1	1700047I17Rik2	NP_001093586.1	ILMN_2730662	006110632	S	2823	AGACAAAATCTCATTCAATCTGATGAGTTTAATAAAACAAAATAGTTTGT					Mus musculus RIKEN cDNA 1700047I17 gene 2 (1700047I17Rik2), mRNA.				MGC61221	MGC61221
Mus musculus	RefSeq	ILMN_200670	ILMN_200670	LOC384454	XM_357656.1	XM_357656.1			38085044	XM_357656.1	LOC384454		ILMN_1240720	002480437	S	79	CTCTGGTCTGCTGTGGGCTTCAATGGCTTTGCTCAGCCTCATGGTATGGC										
Mus musculus	RefSeq	ILMN_220706	ILMN_311984	1600002D24RIK	XM_001473403.1	XM_001473403.1		69776	149268245	XM_001473403.1	1600002D24Rik	XP_001473453.1	ILMN_2725573	004050142	S	128	CCTCACGGCCTTCCAGACCTGCCACTGCTTTTTGCCATGATGTGCTCACC					PREDICTED: Mus musculus RIKEN cDNA 1600002D24 gene (1600002D24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216039	ILMN_241006	ZSCAN22	NM_001001447.2	NM_001001447.2		232878	142374570	NM_001001447.2	Zscan22	NP_001001447.1	ILMN_1246299	005050332	S	1649	GCTCTCATGGTGCACCTAAAGATCCATATCACCGTGACTCGAAGCACCCC	7	+	13492617-13492666	7qA1	Mus musculus zinc finger and SCAN domain containing 22 (Zscan22), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW227621; Hkr2; D530006B18Rik	AW227621; Hkr2; D530006B18Rik
Mus musculus	RefSeq	ILMN_216039	ILMN_241006	ZSCAN22	NM_001001447.2	NM_001001447.2		232878	142374570	NM_001001447.2	Zscan22	NP_001001447.1	ILMN_1260324	002690523	S	206	TGCCCAATGGCCATCCCCAAGAGCCCTCTGAGCCCAGTACTCTGGGAACA	7	+	13489026-13489031:13489032-13489075	7qA1	Mus musculus zinc finger and SCAN domain containing 22 (Zscan22), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW227621; Hkr2; D530006B18Rik	AW227621; Hkr2; D530006B18Rik
Mus musculus	MEEBO	ILMN_209164	ILMN_209164	DOCK10	scl0210293.1_0	XM_129913.4			38049679	XM_129913.4	Dock10		ILMN_2593143	002710128	S	6579	CCGCGGCTGTACCTGTGGTCTCCATCTCATCCAGTGCGGAGGTTTGAGAG								Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210823	ILMN_324157	5330426L24RIK	XR_035324.1	XR_035324.1		78285	149266049	XR_035324.1	5330426L24Rik		ILMN_1224717	005670324	S	1826	AGCAGGTGCAGCCGCATGGGCCTAGATGGTGCCCTGGCCCATTGCCAGGC				14qC2	PREDICTED: Mus musculus RIKEN cDNA 5330426L24 gene (5330426L24Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_187235	ILMN_187235	TTC3	NM_009441.2	NM_009441.2		22129	154091023	NM_009441.2	Ttc3	NP_033467.2	ILMN_2447297	007320471	S	765	GAAAATTGCAACTTGCTAGAAGAATTTAGAAGGCATAGTTGCATGCAGTG				16qC4	Mus musculus tetratricopeptide repeat domain 3 (Ttc3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221
Mus musculus	RefSeq	ILMN_187235	ILMN_187235	TTC3	NM_009441.2	NM_009441.2		22129	154091023	NM_009441.2	Ttc3	NP_033467.2	ILMN_2498479	000580379	S	7106	CCCTGAAACATGGTGTCCATGCTGTAACAGTGGAGTGCAGTACATGCCTG				16qC4	Mus musculus tetratricopeptide repeat domain 3 (Ttc3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221
Mus musculus	RefSeq	ILMN_187235	ILMN_187235	TTC3	NM_009441.2	NM_009441.2		22129	154091023	NM_009441.2	Ttc3	NP_033467.2	ILMN_1257914	001090445	S	419	TCAACATCAACACAGTTCTATAATATCAAGATTGCACCCCTGTGTAGAAG				16qC4	Mus musculus tetratricopeptide repeat domain 3 (Ttc3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221
Mus musculus	RefSeq	ILMN_187235	ILMN_187235	TTC3	NM_009441.2	NM_009441.2		22129	154091023	NM_009441.2	Ttc3	NP_033467.2	ILMN_1260446	000670707	S	3389	GCACAGCAGCGAGTATGTTGTCCGAAATAAGAAGCTCTGGGATATTAACC				16qC4	Mus musculus tetratricopeptide repeat domain 3 (Ttc3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221
Mus musculus	RefSeq	ILMN_187235	ILMN_187235	TTC3	NM_009441.2	NM_009441.2		22129	154091023	NM_009441.2	Ttc3	NP_033467.2	ILMN_1247036	004810474	S	147	GCTGAGGGAGGTCTCAGTTTGGCAGATGATATCTTACTGGAAGATTACCC				16qC4	Mus musculus tetratricopeptide repeat domain 3 (Ttc3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221
Mus musculus	RefSeq	ILMN_187235	ILMN_187235	TTC3	NM_009441.2	NM_009441.2		22129	154091023	NM_009441.2	Ttc3	NP_033467.2	ILMN_2469121	001710707	S	638	TTTAAATTGGATAAAATACACGGGTGATGTAACAATTCTACCTAAATTAG				16qC4	Mus musculus tetratricopeptide repeat domain 3 (Ttc3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221	2610202A04Rik; D16Ium21; mKIAA4119; D16Ium21e; TPRD; KIAA4119; AA409221
Mus musculus	RefSeq	ILMN_219864	ILMN_219864	MAP2K1	NM_008927.3	NM_008927.3		26395	142372689	NM_008927.3	Map2k1	NP_032953.1	ILMN_2714534	005080364	S	2281	AAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCTTTTAACCACT	9	-	64033656-64033705	9qC	Mus musculus mitogen-activated protein kinase kinase 1 (Map2k1), mRNA.		Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IMP];  [goid 4728] [evidence IMP]	Prkmk1; MEKK1; Mek1; MAPKK1	Prkmk1; MEKK1; Mek1; MAPKK1
Mus musculus	RefSeq	ILMN_190397	ILMN_232847	LOC630284	XM_903408.3	XM_903408.3		630284	149263777	XM_903408.3	LOC630284	XP_908501.3	ILMN_2469804	001780370	S	220	GGTAGCACCTACTATCCAGACAGTGTGAAGGGCCGATTCACCATCTCCAG	12|NT_114985.2	+	594057-594106		PREDICTED: Mus musculus similar to monoclonal anti-alpha-1,3-galactosyltransferase IgM heavy chain (LOC630284), mRNA.					
Mus musculus	RefSeq	ILMN_195863	ILMN_232847	LOC630284	XM_903408.3	XM_903408.3		630284	149263777	XM_903408.3	LOC630284	XP_908501.3	ILMN_2519425	001300195	S	48	TGTCCAGTGTGAAGTGAAGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAGC	12|NT_114985.2	+	593885-593934		PREDICTED: Mus musculus similar to monoclonal anti-alpha-1,3-galactosyltransferase IgM heavy chain (LOC630284), mRNA.					
Mus musculus	RefSeq	ILMN_221624	ILMN_221624	2410018L13RIK	NM_028362.1	NM_028362.1		69732	46575896	NM_028362.1	2410018L13Rik	NP_082638.1	ILMN_2738005	000160204	S	3079	TATATACTGCGGTATCCTTTCTTTTAATATATAAGTTTTGTATAAAGTGA	12	+	23046650-23046699	12qA1.3	Mus musculus RIKEN cDNA 2410018L13 gene (2410018L13Rik), mRNA.				2810480C08Rik	2810480C08Rik
Mus musculus	RefSeq	ILMN_201445	ILMN_221624	2410018L13RIK	NM_028362.1	NM_028362.1		69732	46575896	NM_028362.1	2410018L13Rik	NP_082638.1	ILMN_2542320	004480753	S	362	TGAGGACTACAAGGCGCCCACTGCCTCTAGCTTCACGCGCACGGCCCAGT	12	+	22991017-22991066	12qA1.3	Mus musculus RIKEN cDNA 2410018L13 gene (2410018L13Rik), mRNA.				2810480C08Rik	2810480C08Rik
Mus musculus	Riken	ILMN_203414	ILMN_203414	B230107J06RIK	ri|B230107J06|PX00068C04|AK045370|3956					AK045370	B230107J06Rik		ILMN_1246952	000450373	S	3602	CCTGTGGGAAGGTGAAATCACTGATAGGCTCCTTCTATTCACTGGGCTGG										
Mus musculus	RefSeq	ILMN_197792	ILMN_197792	LOC381022	XM_354930.1	XM_354930.1			38078181	XM_354930.1	LOC381022		ILMN_1215895	003140136	S	3964	ACCGGAGGCCCTGCAGCGGAGGTCGTGACGTTTGACAAGGAGGACAAAAT										
Mus musculus	RefSeq	ILMN_252182	ILMN_252182	LOC381852	NM_001034877.1	NM_001034877.1		381852	85702218	NM_001034877.1	LOC381852	NP_001030049.1	ILMN_2830750	005340307	S	1627	CCTCTCGTCTACAGCAGTGTGTGGTCATTTCCGTATTGATGGGGTGCAAA	7	+	17077333-17077382	7qA2	Mus musculus similar to carcinoembryonic antigen-related cell adhesion molecule 3 (LOC381852), mRNA.					
Mus musculus	MEEBO	ILMN_184645	ILMN_184645	C230098O21RIK	scl15510.1.1_178						C230098O21Rik		ILMN_2420353	004040154	S	17	CCCTCAGCAGGCTGCTTCGGATGGACTGGCGTTTGGAAGACTACGTACAC										
Mus musculus	Riken	ILMN_206907	ILMN_206907	6720480F11RIK	ri|6720480F11|PX00060G21|AK078454|3607					AK078454	6720480F11Rik		ILMN_1255586	004150689	S	2962	GCAGTGCACCTGGGCTTAGTTCTTAGCATTCACATGGCAGCTTGCAACCA										
Mus musculus	MEEBO	ILMN_191835	ILMN_191835	9230108I15RIK	scl078078.1_58						9230108I15Rik		ILMN_2482636	004760440	S	4	CCTGGCTTGACTCACAGCTGTATATTACCTCCAATCTGAAACTAACTCAG										
Mus musculus	MEEBO	ILMN_185306	ILMN_185306	2700068H02RIK	scl24038.2.1_92						2700068H02Rik		ILMN_2425924	006250520	S	19	CCGACTACCTCAGCTTTCCAGGCGTGTTCTGCTAGATTCTGTGAGCGGAC										
Mus musculus	RefSeq	ILMN_210453	ILMN_210453	REPIN1	NM_175099.3	NM_175099.3		58887	120953033	NM_175099.3	Repin1	NP_780308.2	ILMN_3131197	003450338	A	2753	GCACCTGGGTACTGGGGCACTGTTACCTCCAGAAGGCACTACTTCTATCG	6	+	48548874-48548923	6qB2.3	Mus musculus replication initiator 1 (Repin1), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI425994; Zfp464; E430037F08Rik; AP4; MGC19105	AI425994; Zfp464; E430037F08Rik; AP4; MGC19105
Mus musculus	RefSeq	ILMN_215059	ILMN_215059	FSTL4	NM_177059.3	NM_177059.3		320027	57527847	NM_177059.3	Fstl4	NP_796033.2	ILMN_2655058	004670719	S	2417	GAAGGTAGTCAGTACAACGCCTATGCCACTCTCGACAAGGAGCCAGACCT	11	+	53000149-53000198	11qB1.3	Mus musculus follistatin-like 4 (Fstl4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	B230374F23Rik; KIAA1061; mKIAA1061	B230374F23Rik; KIAA1061; mKIAA1061
Mus musculus	RefSeq	ILMN_253073	ILMN_253073	ZFP692	NM_001040686.1	NM_001040686.1		103836	100817069	NM_001040686.1	Zfp692	NP_001035776.1	ILMN_3141195	002570343	A	1762	GGGTGCCAGACCCCAGGAACAGAGAGAAAAGTTAGGTGAGTGCAGTGGAG	11	+	58127990-58128024:58128025-58128039	11qB1.3	Mus musculus zinc finger protein 692 (Zfp692), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI839920; AI746306	AI839920; AI746306
Mus musculus	Riken	ILMN_207300	ILMN_207300	4632427N05RIK	ri|4632427N05|PX00637M22|AK076298|2827					AK076298	4632427N05Rik		ILMN_1249530	006620164	S	2730	ACGGTGAGAACATGAGGCTGGACTGACTTACCAGCATTCCCCCATGGCAC										
Mus musculus	RefSeq	ILMN_213913	ILMN_213913	ATP5S	NM_026536.1	NM_026536.1		68055	13386039	NM_026536.1	Atp5s	NP_080812.1	ILMN_2642158	002680047	S	1049	CTCACTGCTGGAATCCACTGTACCGAGCTGTCGTGGCATTGAGAGCTGCG	12	+	70845209-70845258	12qC2	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (Atp5s), nuclear gene encoding mitochondrial protein, mRNA.	All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]	ATPW; 1110015E18Rik; facyor B	ATPW; 1110015E18Rik; facyor B
Mus musculus	RefSeq	ILMN_208853	ILMN_208853	CML2	NM_053096.3	NM_053096.3		93673	113865962	NM_053096.3	Cml2	NP_444326.2	ILMN_2734410	006580092	S	2057	CAGGAATTGTATGAATATGTCACCCTAGGGAAAATGCCTGGACCAACTGG	6	-	85816589-85816638	6qC3	Mus musculus camello-like 2 (Cml2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence ISA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence NAS]		
Mus musculus	RefSeq	ILMN_208853	ILMN_208853	CML2	NM_053096.3	NM_053096.3		93673	113865962	NM_053096.3	Cml2	NP_444326.2	ILMN_1215139	005270427	S	2804	CAGTGAGAGGTAGTCACTCCAGAGACTCATAATTTCCCTGATTGCTGAGC	6	-	85815842-85815891	6qC3	Mus musculus camello-like 2 (Cml2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence ISA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence NAS]		
Mus musculus	RefSeq	ILMN_208853	ILMN_208853	CML2	NM_053096.3	NM_053096.3		93673	113865962	NM_053096.3	Cml2	NP_444326.2	ILMN_1248507	001110475	S	909	GGCCAGTACTTTGTCAGTATAAGCAAGAAGTTAATGGGTCTTTCTATTCT	6	-	85817737-85817786	6qC3	Mus musculus camello-like 2 (Cml2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence ISA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence NAS]		
Mus musculus	Riken	ILMN_204037	ILMN_204037	A730010I05RIK	ri|A730010I05|PX00149K11|AK042612|1361					AK042612	A730010I05Rik		ILMN_1259430	002690113	S	1114	CCATGGGTCAGAGGTCCAAGTTCCTGTGAGGTGCCTGTGTGCATCTTAGC										
Mus musculus	Riken	ILMN_206721	ILMN_206721	C230059B01RIK	ri|C230059B01|PX00175D09|AK082520|1592					AK082520	C230059B01Rik		ILMN_1248639	002470370	S	1107	CCTCCAGGGTAGCCCTTCTGGCATCTTGTTTAGCCCAGCATCTCTTGATT										
Mus musculus	RefSeq	ILMN_216554	ILMN_216554	EBNA1BP2	NM_026932.3	NM_026932.3		69072	118130295	NM_026932.3	Ebna1bp2	NP_081208.1	ILMN_2702508	005490278	S	894	AACACGAAAGAGAGCTACGACGATGTCTCCAGCTTCCGAGCCAAGGTGGC	4	+	118298198-118298247	4qD2.1	Mus musculus EBNA1 binding protein 2 (Ebna1bp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence TAS]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence TAS]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	Nobp; Ebp2; 1810014B19Rik; B830003A16Rik; p40; C81321; AA537058	Nobp; Ebp2; 1810014B19Rik; B830003A16Rik; p40; C81321; AA537058
Mus musculus	RefSeq	ILMN_216554	ILMN_216554	EBNA1BP2	NM_026932.3	NM_026932.3		69072	118130295	NM_026932.3	Ebna1bp2	NP_081208.1	ILMN_2737008	006450647	S	2430	TAATGGGCGTTTGTATCTCGTTCTCACTGCCGGTGCCCAGAGCTTCCTGC	4	+	118299868-118299917	4qD2.1	Mus musculus EBNA1 binding protein 2 (Ebna1bp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence TAS]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence TAS]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	Nobp; Ebp2; 1810014B19Rik; B830003A16Rik; p40; C81321; AA537058	Nobp; Ebp2; 1810014B19Rik; B830003A16Rik; p40; C81321; AA537058
Mus musculus	MEEBO	ILMN_186776	ILMN_186776	GRIA2	scl22034.13_42				7305114	NM_013540	Gria2		ILMN_2680737	000450204	S	2935	ACTCCAGAATTTCCCAAAGCAGTGCATGCTGTCCCTTACGTGAGTCCTGG						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus [goid 32281] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IDA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218553	ILMN_218553	FIGF	NM_010216.1	NM_010216.1		14205	6753873	NM_010216.1	Figf	NP_034346.1	ILMN_2697220	005860521	S	1523	GCAATGGCGGCTAGGTGATTCCCCAGTTCACTGACAAATGACTTGTAGCT	X	+	160840226-160840275	XqF5	Mus musculus c-fos induced growth factor (Figf), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Interacting selectively with vascular endothelial growth factor receptor 2 [goid 43184] [evidence IDA]; Interacting selectively with vascular endothelial growth factor receptor 3 [goid 43185] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Vegfd; VEGF-D; AI325264	Vegfd; VEGF-D; AI325264
Mus musculus	RefSeq	ILMN_198010	ILMN_255205	LOC665792	XM_974526.1	XM_974526.1		665792	94375148	XM_974526.1	LOC665792	XP_979620.1	ILMN_1239872	007040609	S	238	CTTAGAGGCCAGCTCATCCCAGAGCGGGTTGATGTAGGATCATGGCTGAG					PREDICTED: Mus musculus hypothetical LOC665792 (LOC665792), mRNA.					
Mus musculus	RefSeq	ILMN_223542	ILMN_223542	THBD	NM_009378.2	NM_009378.2		21824	142365367	NM_009378.2	Thbd	NP_033404.1	ILMN_1249767	001230767	S	3402	GTGCCACACAGAGTCCAGAAGGGTTTTGTTTTAAGTAAGCTAGGAATGAG	2	-	148230388-148230437	2qG3	Mus musculus thrombomodulin (Thbd), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IMP]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of coagulation [goid 50819] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CD141; TM; AI385582	CD141; TM; AI385582
Mus musculus	RefSeq	ILMN_188518	ILMN_224565	2410078J06RIK	XM_917981.3	XM_917981.3		73671	149269496	XM_917981.3	2410078J06Rik	XP_923074.3	ILMN_1242367	005490414	S	628	GAGACACATGGTGCCATTGGGCCCTTCCTCTTCCGCAAAGGTGAGGTTGG				17qE3	PREDICTED: Mus musculus RIKEN cDNA 2410078J06 gene, transcript variant 3 (2410078J06Rik), mRNA.					
Mus musculus	MEEBO	ILMN_215700	ILMN_215700	A430110L20RIK	scl17125.1.3_303	XM_283678.1			28483686	XM_283678.1	A430110L20Rik		ILMN_2662576	002850088	S	2328	GAAGGTACCTGATTTTGATTCACACGAGTTCCCATCATCCCTTGGGCCTT										
Mus musculus	MEEBO	ILMN_194931	ILMN_194931	E330037M01RIK	scl00319775.1_8						E330037M01Rik		ILMN_2510980	006250341	S	19	AGCTGACAGAAAAGTCTCTTACATGTAGAAATATGGATAAGAGTAGACAC										
Mus musculus	RefSeq	ILMN_212068	ILMN_212068	NDN	NM_010882.3	NM_010882.3		17984	116642896	NM_010882.3	Ndn	NP_035012.2	ILMN_2622374	004490367	S	1577	CAGTGTAGGCACTTAGCACCCTTTACAAAACATGTATGCAACCCCACCAT	7	+	69494739-69494788	7qC	Mus musculus necdin (Ndn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence TAS]; The orderly movement of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system [goid 8347] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IGI]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IMP]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; Long distance growth of a single axon process involved in cellular development [goid 48676] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the microtubule constituent protein gamma-tubulin [goid 43015] [evidence IDA]	AI528698; Peg6	AI528698; Peg6
Mus musculus	RefSeq	ILMN_209260	ILMN_209260	RPS3	NM_012052.2	NM_012052.2		27050	115270974	NM_012052.2	Rps3	NP_036182.1	ILMN_2637639	001010672	S	205	CCGAGTTACACCAACCAGGACAGAAATCATTATTTTAGCCACCAGGACAC	7	-	106630859-106630864:106631080-106631123	7qE2	Mus musculus ribosomal protein S3 (Rps3), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	D7Ertd795e; Rs_3	D7Ertd795e; Rs_3
Mus musculus	Riken	ILMN_204773	ILMN_204773	ARHGAP6	ri|C130002I12|PX00166H19|AK047827|1311					AK047827	Arhgap6		ILMN_1229541	000160372	S	1003	CCCAGGAGATGAAACACCACTCAGAAGCTTGGAAAGATGGAGTTGGGATG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215930	ILMN_215930	STX8	NM_018768.2	NM_018768.2		55943	56118241	NM_018768.2	Stx8	NP_061238.1	ILMN_3064056	006510608	I	3809	CTGGAACCAGTGACCTGCTGTGAGCGTTCTGGAACCAGTGACCTGCTGTG	11	+	68020355-68020404	11qB3	Mus musculus syntaxin 8 (Stx8), mRNA. XM_924708 XM_924711 XM_924713	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	CARB; 0610007H08Rik; 1110002H11Rik; 4930571E13Rik	CARB; 0610007H08Rik; 1110002H11Rik; 4930571E13Rik
Mus musculus	RefSeq	ILMN_215930	ILMN_215930	STX8	NM_018768.2	NM_018768.2		55943	56118241	NM_018768.2	Stx8	NP_061238.1	ILMN_2710544	003990441	S	608	TTCGAACTGAAGCCAGGCGAGTGACCCTGGTGGACAGAAAGTCAACTTCC	11	+	67922827-67922876	11qB3	Mus musculus syntaxin 8 (Stx8), mRNA. XM_924708 XM_924711 XM_924713	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	CARB; 0610007H08Rik; 1110002H11Rik; 4930571E13Rik	CARB; 0610007H08Rik; 1110002H11Rik; 4930571E13Rik
Mus musculus	RefSeq	ILMN_215930	ILMN_215930	STX8	NM_018768.2	NM_018768.2		55943	56118241	NM_018768.2	Stx8	NP_061238.1	ILMN_2754479	003710332	S	402	GCCGGAGGAGACCAGAGGTTTGGGTTTTGATGAGATCCGACAACAGCAGC	11	+	67824877-67824926	11qB3	Mus musculus syntaxin 8 (Stx8), mRNA. XM_924708 XM_924711 XM_924713	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	CARB; 0610007H08Rik; 1110002H11Rik; 4930571E13Rik	CARB; 0610007H08Rik; 1110002H11Rik; 4930571E13Rik
Mus musculus	RefSeq	ILMN_215930	ILMN_215930	STX8	NM_018768.2	NM_018768.2		55943	56118241	NM_018768.2	Stx8	NP_061238.1	ILMN_3141830	003870021	A	22	GCCCCGGACCCCTGGTTCTCCACATACGATTCTACGTGTCAGATAGCCCA	11	+	67780006-67780019:67783274-67783309	11qB3	Mus musculus syntaxin 8 (Stx8), mRNA. XM_924708 XM_924711 XM_924713	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	CARB; 0610007H08Rik; 1110002H11Rik; 4930571E13Rik	CARB; 0610007H08Rik; 1110002H11Rik; 4930571E13Rik
Mus musculus	RefSeq	ILMN_201600	ILMN_233560	USP22	NM_001004143.3	NM_001004143.3		216825	141802354	NM_001004143.3	Usp22	NP_001004143.2	ILMN_1243503	007000661	S	1525	CAGCAGCCCCTGGACAGTCTCAACAATGACAACAAATACTCCCTGTTTGC	11	-	60968816-60968831:60969270-60969303	11qB2	Mus musculus ubiquitin specific peptidase 22 (Usp22), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IC ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]	KIAA1063; AI427806; MGC91200; mKIAA1063; 9330200A01	KIAA1063; AI427806; MGC91200; mKIAA1063; 9330200A01
Mus musculus	RefSeq	ILMN_193162	ILMN_233560	USP22	NM_001004143.3	NM_001004143.3		216825	141802354	NM_001004143.3	Usp22	NP_001004143.2	ILMN_2494618	000450468	S	3933	GAACCACCTAGTATATGTGCTCAGATGGTCACAGAAGTGCATCTCACCAC	11	-	60965742-60965791	11qB2	Mus musculus ubiquitin specific peptidase 22 (Usp22), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IC ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]	KIAA1063; AI427806; MGC91200; mKIAA1063; 9330200A01	KIAA1063; AI427806; MGC91200; mKIAA1063; 9330200A01
Mus musculus	Riken	ILMN_202569	ILMN_202569	3110023E09RIK	ri|3110023E09|ZX00071G04|AK014071|1969					AK014071	3110023E09Rik		ILMN_1212991	000010040	S	987	CATGGATTAAGCAGCCTCCAAGGATGCCCGTGAGCCTGTCATTGGAGCCA										
Mus musculus	RefSeq	ILMN_200582	ILMN_200582	LOC381755	XM_355750.1	XM_355750.1			38083923	XM_355750.1	LOC381755		ILMN_1236670	007330445	S	794	GATTCCTCATGGGTAGGAACGAGCACAGGTCCCCCGCTCCTGGTAAGAGA										
Mus musculus	RefSeq	ILMN_221608	ILMN_221608	CLCA5	NM_178697.4	NM_178697.4		229933	142361895	NM_178697.4	Clca5	NP_848812.1	ILMN_1223362	001740167	S	3498	GTCCTTGTCCCTTGGATACTGATCTGTAGCAGAGGTCACCGGAGTTTACT	3	-	144733602-144733651	3qH2	Mus musculus chloride channel calcium activated 5 (Clca5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts [goid 15276] [evidence IDA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts [goid 15276] [evidence IMP]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IDA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IMP]	4732440A06; AI586120	4732440A06; AI586120
Mus musculus	RefSeq	ILMN_212375	ILMN_321935	LOC100045491	XR_032043.1	XR_032043.1		100045491	149262661	XR_032043.1	LOC100045491		ILMN_2625725	004070408	S	1619	CCGAGAGCAAGACCCCCGACTTTCTGCTGTCACAGTCGGTAGACCAGCTG					PREDICTED: Mus musculus hypothetical protein LOC100045491 (LOC100045491), misc RNA.					
Mus musculus	RefSeq	ILMN_208765	ILMN_208765	H2AFX	NM_010436.2	NM_010436.2		15270	31981698	NM_010436.2	H2afx	NP_034566.1	ILMN_2907878	001090327	S	1089	GGGTCAGAGAGACGCTTACCGGCCTGTGGACAAGAGTTCTATACCTGCCG	9	+	44143886-44143935	9qA5.2	Mus musculus H2A histone family, member X (H2afx), mRNA.	The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IDA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IDA]	AW228881; Hist5-2ax; H2A.X; H2ax	AW228881; Hist5-2ax; H2A.X; H2ax
Mus musculus	Riken	ILMN_201825	ILMN_201825	2610311E24RIK	ri|2610311E24|ZX00062K03|AK012008|1192					AK012008	2610311E24Rik		ILMN_1242095	000580192	S	858	CTGATCAGGGAAACCTAACCCAGCCCTAGTAGGCGGAGCCACCTTGCTGC										
Mus musculus	RefSeq	ILMN_190670	ILMN_246526	BC017647	NM_145430.1	NM_145430.1		216971	21703857	NM_145430.1	BC017647	NP_663405.1	ILMN_1233664	000020349	S	2566	GTTGCCTCTGTCCAAACTCAGCTATTGTCCTCAATCCTGCCTACCCTCCC	11	+	77969430-77969479	11qB5	Mus musculus cDNA sequence BC017647 (BC017647), mRNA.				MGC28990	MGC28990
Mus musculus	RefSeq	ILMN_254473	ILMN_254473	EG435366	NM_001013825.2	NM_001013825.2		435366	126215552	NM_001013825.2	EG435366	NP_001013847.2	ILMN_2936906	002340220	S	1512	AACTTGGTAACCTCCAGTCACATAGACGAATTCATACTGGAGAGAAACCC	13	-	62801713-62801762	13qB3	Mus musculus predicted gene, EG435366 (EG435366), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_206408	ILMN_206408	GTF2IRD1	ri|C130078F20|PX00171O11|AK081801|3922					AK081801	Gtf2ird1		ILMN_1253551	002260068	S	3829	AACAAACATAAGGGCTGAGGGGGACCGAGCTTGATGGCTGAGTACTTGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_220139	ILMN_220139	LTA	NM_010735.1	NM_010735.1		16992	7106342	NM_010735.1	Lta	NP_034865.1	ILMN_2780247	002900474	S	1198	GAGAGAGATGGCGAGAGAATTAGATGTGGGTGACCAAGGGGTTCTAGAAG	17	-	35341494-35341543	17qB1	Mus musculus lymphotoxin A (Lta), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; The process of apoptosis in transformed cells, cells that have undergone changes manifested by escape from control mechanisms, increased growth potential, alterations in the cell surface, karyotypic abnormalities, morphological and biochemical deviations from the norm [goid 6927] [evidence TAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence TAS]	LT[a]; LT-alpha; LT-[a]; Tnfsf1b; TNF-beta; Tnfb; MGC117668; LTalpha; Ltx; LT; TNFSF1	LT[a]; LT-alpha; LT-[a]; Tnfsf1b; TNF-beta; Tnfb; MGC117668; LTalpha; Ltx; LT; TNFSF1
Mus musculus	RefSeq	ILMN_220139	ILMN_220139	LTA	NM_010735.1	NM_010735.1		16992	7106342	NM_010735.1	Lta	NP_034865.1	ILMN_1229804	005720482	S	727	CACTTCAGCCCCAGCAGTGTATTCTTTGGAGCCTTTGCACTGTAGATTCT	17	-	35341760-35341809	17qB1	Mus musculus lymphotoxin A (Lta), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; The process of apoptosis in transformed cells, cells that have undergone changes manifested by escape from control mechanisms, increased growth potential, alterations in the cell surface, karyotypic abnormalities, morphological and biochemical deviations from the norm [goid 6927] [evidence TAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence TAS]	LT[a]; LT-alpha; LT-[a]; Tnfsf1b; TNF-beta; Tnfb; MGC117668; LTalpha; Ltx; LT; TNFSF1	LT[a]; LT-alpha; LT-[a]; Tnfsf1b; TNF-beta; Tnfb; MGC117668; LTalpha; Ltx; LT; TNFSF1
Mus musculus	RefSeq	ILMN_239628	ILMN_239628	A3GALT2	NM_001009819.2	NM_001009819.2		215493	78486564	NM_001009819.2	A3galt2	NP_001009819.1	ILMN_2825898	006660768	S	3318	TCTCTGCTCTATTATCTCCCGTGGCCGCAGCAGCTTGTGCATATTTGAGG	4	+	128446470-128446519	4qD2.2	Mus musculus alpha 1,3-galactosyltransferase 2 (isoglobotriaosylceramide synthase) (A3galt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [evidence ISO]	Catalysis of the transfer of a galactose residue from a donor molecule, such as GDP-galactose or UDP-galactose, to an oligosaccharide, forming an alpha-1,3-linkage [goid 1962] [evidence ISO]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: beta-D-galactosyl-(1,4)-beta-N-acetyl-D-glucosaminyl-R + UDP-galactose = alpha-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-N-acetyl-D-glucosaminyl-R + UDP [goid 47276] [evidence IEA]	Gm433; iGb3	Gm433; iGb3
Mus musculus	RefSeq	ILMN_197845	ILMN_239628	A3GALT2	NM_001009819.2	NM_001009819.2		215493	78486564	NM_001009819.2	A3galt2	NP_001009819.1	ILMN_1239466	000020451	S	1574	TGGACCATAAGCGCGGCATTGAGGCACTCTGGCACGACGAAAGCCACCTT	4	+	128444726-128444775	4qD2.2	Mus musculus alpha 1,3-galactosyltransferase 2 (isoglobotriaosylceramide synthase) (A3galt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [evidence ISO]	Catalysis of the transfer of a galactose residue from a donor molecule, such as GDP-galactose or UDP-galactose, to an oligosaccharide, forming an alpha-1,3-linkage [goid 1962] [evidence ISO]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: beta-D-galactosyl-(1,4)-beta-N-acetyl-D-glucosaminyl-R + UDP-galactose = alpha-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-N-acetyl-D-glucosaminyl-R + UDP [goid 47276] [evidence IEA]	Gm433; iGb3	Gm433; iGb3
Mus musculus	RefSeq	ILMN_220101	ILMN_227422	9230112D13RIK	XM_910881.2	XM_910881.2		78243	94396829	XM_910881.2	9230112D13Rik	XP_915974.2	ILMN_1247914	002360008	S	388	CGCGTCTCCAAAGACAAAACCGCGTTAATGTCCAAAATTCAGCTTTTCCT				14qB	PREDICTED: Mus musculus RIKEN cDNA 9230112D13 gene (9230112D13Rik), mRNA.					
Mus musculus	MEEBO	ILMN_184885	ILMN_184885	LOC330217	scl0330217.3_4						LOC330217		ILMN_2422396	000780458	S	3	CGGACAATGGAAAAGAAGAAGCTATCAGAAGGCATGACCTGAAGTACCTG										
Mus musculus	RefSeq	ILMN_187366	ILMN_237094	PUM2	XM_978945.1	XM_978945.1		80913	94392553	XM_978945.1	Pum2	XP_984039.1	ILMN_1228635	006900154	S	1879	GTAGTAGTGCCACAAGGAGAGAGTCTCTATCTACTAGCTCTGACTTGTAC				12qA1.1	PREDICTED: Mus musculus pumilio 2 (Drosophila), transcript variant 9 (Pum2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_185435	ILMN_243278	MEGF6	XM_909777.2	XM_909777.2		230971	94372971	XM_909777.2	Megf6	XP_914870.1	ILMN_2427021	006250349	S	6390	GCCTAAGAGACCTCACGGCACACTTCCTACATGGCCATCATGAGGAGAAC				4qE2	PREDICTED: Mus musculus multiple EGF-like-domains 6, transcript variant 4 (Megf6), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222511	ILMN_222511	BC002216	NM_024472.2	NM_024472.2		79554	31560024	NM_024472.2	BC002216	NP_077792.2	ILMN_2939377	000630386	S	2188	GGGGAGGGAGCTAACCCTAGGAATAAGGCTAAAGCATGTGTCTCCAGTCC	4	-	154708947-154708996	4qE2	Mus musculus cDNA sequence BC002216 (BC002216), mRNA.				MGC7473	MGC7473
Mus musculus	RefSeq	ILMN_205651	ILMN_248566	9330129D05RIK	XM_001000582.1	XM_001000582.1		338350	94376690	XM_001000582.1	9330129D05Rik	XP_001000582.1	ILMN_1234296	007210491	S	2850	CCTCCTGAGTGCTTAGATCAAAGGTGTGAAAGGTGTGCGCCACCAGACCC				5qF	PREDICTED: Mus musculus RIKEN cDNA 9330129D05 gene, transcript variant 2 (9330129D05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187327	ILMN_187327	TRERF1	NM_172622.2	NM_172622.2		224829	148271105	NM_172622.2	Trerf1	NP_766210.1	ILMN_1219817	006330646	S	637	CGCCTCACTTCCCTCAAGATACTCGGGATGGTCTCGGCTTGCCTATTGGC				17qC	Mus musculus transcriptional regulating factor 1 (Trerf1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9430096I18Rik; Trep132; Trep-132; MGC118525; RAPA; B830015H24	9430096I18Rik; Trep132; Trep-132; MGC118525; RAPA; B830015H24
Mus musculus	RefSeq	ILMN_187327	ILMN_187327	TRERF1	NM_172622.2	NM_172622.2		224829	148271105	NM_172622.2	Trerf1	NP_766210.1	ILMN_1227770	006290053	S	4049	GGACGACCAAGATTCGGTTTTGCTTCAGGGTGATACAGAACTCTAAACCC				17qC	Mus musculus transcriptional regulating factor 1 (Trerf1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9430096I18Rik; Trep132; Trep-132; MGC118525; RAPA; B830015H24	9430096I18Rik; Trep132; Trep-132; MGC118525; RAPA; B830015H24
Mus musculus	RefSeq	ILMN_217698	ILMN_217698	PSMC3	NM_008948.1	NM_008948.1		19182	6679502	NM_008948.1	Psmc3	NP_032974.1	ILMN_2686571	002350543	S	1320	GTGAACTATGAAGAGCTGGCTCGGTGCACTGATGACTTCAATGGAGCCCA	2	+	90899220-90899269	2qE1	Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase 3 (Psmc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	TBP-1	TBP-1
Mus musculus	RefSeq	ILMN_219190	ILMN_219190	PCDHGA8	NM_033591.3	NM_033591.3		93716	118130786	NM_033591.3	Pcdhga8	NP_291069.1	ILMN_2705452	004880609	S	2475	CCCAGACAAGCCACATTATCTTTCCGCAGCCCAACTATGCAGACATGCTC	18	+	37887834-37887883	18qB3	Mus musculus protocadherin gamma subfamily A, 8 (Pcdhga8), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA4054; mKIAA4054	KIAA4054; mKIAA4054
Mus musculus	RefSeq	ILMN_216507	ILMN_216507	DEM1	NM_028457.1	NM_028457.1		73172	21312138	NM_028457.1	Dem1	NP_082733.1	ILMN_2671878	007050523	S	1773	CCCAGGGCCAAAGATCAAGAATGTGGAGAGATGTGGTGTTAGAGTGACCT	4	-	120593974-120594023	4qD2.2	Mus musculus defects in morphology 1 homolog (S. cerevisiae) (Dem1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-182D20.4; AV297100	RP23-182D20.4; AV297100
Mus musculus	RefSeq	ILMN_223655	ILMN_223655	PCDHGA1	NM_033584.1	NM_033584.1		93709	18087752	NM_033584.1	Pcdhga1	NP_291062.1	ILMN_2767191	001510215	S	2252	GACCTATTCCCGTGAGATCTCACTCACTGCTGACTCTCGAAAGAGCCACT	18	+	37823850-37823899	18qB3	Mus musculus protocadherin gamma subfamily A, 1 (Pcdhga1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211119	ILMN_211119	PCDHGA6	NM_033589.1	NM_033589.1		93714	18087762	NM_033589.1	Pcdhga6	NP_291067.1	ILMN_2612710	002600039	S	2156	GGCACAAGTCAAGATTGCTGAAGGCCACAAGGAAAGGTGTGTCAAATATG	18	+	37869038-37869087	18qB3	Mus musculus protocadherin gamma subfamily A, 6 (Pcdhga6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_249306	ILMN_249306	ITGB4	NM_133663.2	NM_133663.2		192897	110735427	NM_133663.2	Itgb4	NP_598424.2	ILMN_3144575	006650646	A	5869	TCTTTCTGACTGCATCCCACCCTGGGTCCAATCCCACATGTAACCAAAAA	11	+	115869584-115869633	11qE2	Mus musculus integrin beta 4 (Itgb4), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IDA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD104; AA407042; C230078O20	CD104; AA407042; C230078O20
Mus musculus	RefSeq	ILMN_237003	ILMN_237003	2010204N08RIK	NM_001081137.1	NM_001081137.1		69983	124487274	NM_001081137.1	2010204N08Rik	NP_001074606.1	ILMN_3139952	006620703	A	5479	CCTGAGGAGGAATTGATATCCGGTCCACGGTTCTACTTTCCTGACTCCCT	3	-	72692840-72692889	3qE3	Mus musculus RIKEN cDNA 2010204N08 gene (2010204N08Rik), mRNA.				SI	SI
Mus musculus	Riken	ILMN_203193	ILMN_203193	MTAP4	ri|A930026A03|PX00066J04|AK044593|2707					AK044593	Mtap4		ILMN_1230897	003420148	S	2276	TCCCCCCCCTTTTTTTATTGGGGGCAGTGGAGTTGGTCAGGGAAGTTTAA						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]			
Mus musculus	Riken	ILMN_205128	ILMN_205128	E230020O17RIK	ri|E230020O17|PX00209H07|AK054118|2704					AK054118	E230020O17Rik		ILMN_1233292	002260709	S	2639	CCTCCGGTGCAGAGCAGTCAAGAACTGTAAGTTCAGTAGTGGGATGAGAA										
Mus musculus	RefSeq	ILMN_223355	ILMN_223355	GADD45B	NM_008655.1	NM_008655.1		17873	6678979	NM_008655.1	Gadd45b	NP_032681.1	ILMN_2900653	003370377	S	949	AGGAGGGCACCTCAGGCAAGAGGAGACTGAGACTTTAGAGCCAAGGCCTG	10	+	80389633-80389682	10qC1	Mus musculus growth arrest and DNA-damage-inducible 45 beta (Gadd45b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Myd118; AI323528	Myd118; AI323528
Mus musculus	RefSeq	ILMN_223355	ILMN_223355	GADD45B	NM_008655.1	NM_008655.1		17873	6678979	NM_008655.1	Gadd45b	NP_032681.1	ILMN_1246065	006020040	S	715	TCCAAACATCTAAAGCAACTGTCGAGTTGCTGTCCCCTAAAAAAAGTAAA	10	+	80389399-80389448	10qC1	Mus musculus growth arrest and DNA-damage-inducible 45 beta (Gadd45b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Myd118; AI323528	Myd118; AI323528
Mus musculus	RefSeq	ILMN_221281	ILMN_221281	GNAI3	NM_010306.2	NM_010306.2		14679	133892802	NM_010306.2	Gnai3	NP_034436.1	ILMN_2733433	001780465	S	3003	TATCTTTCCTTTGTTGTATTCTGTAATATAAGAACATCTGGTGAAATATT	3	-	107910375-107910424	3qF2.3	Mus musculus guanine nucleotide binding protein (G protein), alpha inhibiting 3 (Gnai3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	AW537698; Gnai-3; AI158965	AW537698; Gnai-3; AI158965
Mus musculus	MEEBO	ILMN_188345	ILMN_188345	SYNJ1	scl00104015.1_306				51769393	XM_358889	Synj1		ILMN_2451904	000270750	S	14	CAACTGGAGTCTACTTACTTTCTTAGATGAATAGATTAGAGCAGGAACTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IDA]; A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes [goid 30118] [evidence TAS]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IMP]; The chemical reactions and pathways involving phosphoinositides, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of inositol. They are important constituents of cell membranes [goid 30384] [evidence TAS]; The chemical reactions and pathways involving phosphoinositides, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of inositol. They are important constituents of cell membranes [goid 30384] [evidence IMP]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence TAS]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IEA]; Catalysis of the conversion of phosphatidylinositol-3-phosphate, phosphatidylinositol-4-phosphate, and phosphatidylinositol-3,5-bisphosphate, but not PI-4,5-bisphosphate, to phosphatidylinositol; PPIPase activity is a key regulator of membrane trafficking and actin cytoskeleton organization [goid 17120] [evidence TAS]; Catalysis of the conversion of phosphatidylinositol-3-phosphate, phosphatidylinositol-4-phosphate, and phosphatidylinositol-3,5-bisphosphate, but not PI-4,5-bisphosphate, to phosphatidylinositol; PPIPase activity is a key regulator of membrane trafficking and actin cytoskeleton organization [goid 17120] [evidence IMP]		
Mus musculus	RefSeq	ILMN_228875	ILMN_228875	OLFR905	NM_146804.1	NM_146804.1		258800	22129248	NM_146804.1	Olfr905	NP_667015.1	ILMN_2936024	000730593	S	72	GTGCCCCCTCTTCATCCTGTTTCTAATGATGTATGTGGTCACTGTGCTGG	9	+	38280405-38280454	9qA5.1	Mus musculus olfactory receptor 905 (Olfr905), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR167-1	MOR167-1
Mus musculus	RefSeq	ILMN_233294	ILMN_233294	AP2A1	NM_001077264.1	NM_001077264.1		11771	116256509	NM_001077264.1	Ap2a1	NP_001070732.1	ILMN_3143246	006510653	A	2945	TAACCCTGCGCACCAGCAAAGAGCCTGTCTCCCGTCACTTGTGTGAGCTG	7	-	52156125-52156174	7qB4	Mus musculus adaptor protein complex AP-2, alpha 1 subunit (Ap2a1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Adtaa	Adtaa
Mus musculus	MEEBO	ILMN_224105	ILMN_224105	EDG2	scl014745.1_6				6754047	NM_010336	Edg2		ILMN_2774854	004040750	S	3274	CGAACTTGGACTTTTATTGATGCCCTTTTTATGGGGGAGGTAAGGACTAT										
Mus musculus	RefSeq	ILMN_224097	ILMN_252178	FXYD2	NM_007503.3	NM_007503.3		11936	122937374	NM_007503.3	Fxyd2	NP_031529.2	ILMN_1242135	000770019	S	24	CCACAGGAAGACCGTCGTGGAGAAGCCCCGATGGCTGGGGAAATATCAGA	9	+	45214183-45214212:45214213-45214232	9qA5.2	Mus musculus FXYD domain-containing ion transport regulator 2 (Fxyd2), transcript variant a, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Atp1g1	Atp1g1
Mus musculus	RefSeq	ILMN_221752	ILMN_221752	CYP1A2	NM_009993.3	NM_009993.3		13077	141803352	NM_009993.3	Cyp1a2	NP_034123.1	ILMN_2739847	001050079	S	1140	CCCCAGCTGCCATATCTAGAGGCCTTCATCCTGGAGATCTACCGATACAC	9	-	57527683-57527732	9qB	Mus musculus cytochrome P450, family 1, subfamily a, polypeptide 2 (Cyp1a2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern [goid 18894] [evidence IMP]; The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IMP]; The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern [goid 18894] [evidence IMP]; The chemical reactions and pathways involving a drug, a substance used in the diagnosis, treatment or prevention of a disease; as used here antibiotic substances (see antibiotic metabolism) are considered to be drugs, even if not used in medical or veterinary practice [goid 17144] [evidence IMP]; The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 50665] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The chemical reactions and pathways involving any member of a large group of derivatives or analogs of porphyrin. Porphyrins consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6778] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 9404] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IDA]	CP12; P450-3	CP12; P450-3
Mus musculus	RefSeq	ILMN_219702	ILMN_232158	OLFR447	NM_146988.1	NM_146988.1		258990	22128956	NM_146988.1	Olfr447	NP_667199.1	ILMN_1254919	001300398	S	774	CATTGGGCCTCAACACGGGAAGTCCAATGAGCAGAAGAAATATCTCTTGC	6	+	42862297-42862346	6qB2.1	Mus musculus olfactory receptor 447 (Olfr447), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR261-1; MGC129177	MOR261-1; MGC129177
Mus musculus	MEEBO	ILMN_195832	ILMN_195832	ARID5B	scl37847.12_470				13128957	NM_023598	Arid5b		ILMN_2684638	001990670	S	2629	CTCCCTGGCAGACTCCTACATCCTCAAACAATAGACGCAGGAGGGCAAAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191504	ILMN_247595	BC100530	NM_001082546.1	NM_001082546.1		100034684	127139276	NM_001082546.1	BC100530	NP_001076015.1	ILMN_2700239	007150100	S	208	GCCGTCGCTGGAGAAAATATCTTCATTAAGATGGATGTAGGTCATGGTTG	16	-	36359651-36359671:36364298-36364326	16qB3	Mus musculus cDNA sequence BC100530 (BC100530), mRNA.				MGC118399	MGC118399
Mus musculus	RefSeq	ILMN_244533	ILMN_244533	TARDBP	NM_001008545.1	NM_001008545.1		230908	56682928	NM_001008545.1	Tardbp	NP_001008545.1	ILMN_3093089	000110577	A	6094	CCCCAGCCAGACCCTGCCTATTGTCTGCCAGCTACTCTGTCAGCTATGAA	4|NT_039289.1	-	147986860-147986909	4qE2	Mus musculus TAR DNA binding protein (Tardbp), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	1190002A23Rik; C85084	1190002A23Rik; C85084
Mus musculus	RefSeq	ILMN_259107	ILMN_259107	MYH6	NM_010856.2	NM_010856.2		17888	31981615	NM_010856.2	Myh6	NP_034986.1	ILMN_2788836	004860743	S	5676	AGACAAGAAGAACTTAATGCGGCTGCAGGACCTGGTGGACAAGCTACAGT	14	-	53897394-53897443	14qC3	Mus musculus myosin, heavy polypeptide 6, cardiac muscle, alpha (Myh6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The process whose specific outcome is the progression of the visceral muscle over time, from its formation to the mature structure [goid 7522] [evidence IMP]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle fiber over time, from its formation to the mature structure [goid 48739] [evidence IMP]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IMP]; Any process that modulates the rate of ATP hydrolysis by an ATPase [goid 43462] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IMP]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	A830009F23Rik; Myhc-a; Myhca; MGC118706; AA517445	A830009F23Rik; Myhc-a; Myhca; MGC118706; AA517445
Mus musculus	RefSeq	ILMN_212860	ILMN_212860	CD81	NM_133655.1	NM_133655.1		12520	19526793	NM_133655.1	Cd81	NP_598416.1	ILMN_2631093	002370364	S	1360	GTAAGCCCTCTTATGCCTTCAATGCACTTATTCTTTCTAACGTGTCACCT	7	+	150248412-150248461	7qF5	Mus musculus CD 81 antigen (Cd81), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [evidence TAS]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence TAS]		Tapa1; Tapa-1; Tspan28	Tapa1; Tapa-1; Tspan28
Mus musculus	RefSeq	ILMN_217036	ILMN_323204	4930557A04RIK	XM_001481251.1	XM_001481251.1		385317	149271037	XM_001481251.1	4930557A04Rik	XP_001481301.1	ILMN_2678394	004210725	S	386	CCAATAAGATAACAGGACTCTATGAGGCACCAAGACCCGGTCCCAAGTGA	X	+	9427214-9427263	XqA1.1	PREDICTED: Mus musculus RIKEN cDNA 4930557A04 gene (4930557A04Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_208674	ILMN_208674	MTHFD2	scl28800.9.784_132				6678951	NM_008638	Mthfd2		ILMN_2769136	004210121	S	1899	AAGAACTGTCAGCAGCTGCCTGCACGTCTTTCACGTACCCCGTTGGCTTT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP+ = 5,10-methenyltetrahydrofolate + NADPH + H+ [goid 4488] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NAD+ = 5,10-methenyltetrahydrofolate + NADH + H+ [goid 4487] [evidence IEA]; Catalysis of the reaction: 5,10-methenyltetrahydrofolate + H2O = 10-formyltetrahydrofolate [goid 4477] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220937	ILMN_220937	P2RY14	NM_133200.3	NM_133200.3		140795	56676314	NM_133200.3	P2ry14	NP_573463.1	ILMN_1219200	006580379	S	1691	CACCCAGTCTTTCCGACCTTCCTCCTAAGCATTCTTCCAAGCAACACTCG	3	-	58918604-58918653	3qD	Mus musculus purinergic receptor P2Y, G-protein coupled, 14 (P2ry14), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y14; Gpr105; A330108O13Rik	P2Y14; Gpr105; A330108O13Rik
Mus musculus	RefSeq	ILMN_220937	ILMN_220937	P2RY14	NM_133200.3	NM_133200.3		140795	56676314	NM_133200.3	P2ry14	NP_573463.1	ILMN_3154419	001240538	A	1607	AGGAACAGAGAAGTGGCTTTGTGGGTGCTGGCGTATGAGTTACCAAAACC	3	-	58918688-58918737	3qD	Mus musculus purinergic receptor P2Y, G-protein coupled, 14 (P2ry14), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y14; Gpr105; A330108O13Rik	P2Y14; Gpr105; A330108O13Rik
Mus musculus	RefSeq	ILMN_220937	ILMN_220937	P2RY14	NM_133200.3	NM_133200.3		140795	56676314	NM_133200.3	P2ry14	NP_573463.1	ILMN_3075340	005050131	I	312	TTAGAGGCCATAAACTGTGCTTTAAGTAACTAGCCTGCCTTTCTATCCAG	3	-	58919983-58920032	3qD	Mus musculus purinergic receptor P2Y, G-protein coupled, 14 (P2ry14), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y14; Gpr105; A330108O13Rik	P2Y14; Gpr105; A330108O13Rik
Mus musculus	RefSeq	ILMN_210936	ILMN_210936	GHDC	NM_031871.1	NM_031871.1		80860	13994198	NM_031871.1	Ghdc	NP_114077.1	ILMN_2862465	003460543	S	1531	TGGGTCCTGCCAAAGTCCATCTGGTGAGGCCAGGGAGCTTCAGGGTTCTC	11	-	100628227-100628276	11qD	Mus musculus GH3 domain containing (Ghdc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]			D11Lgp1e	D11Lgp1e
Mus musculus	RefSeq	ILMN_198199	ILMN_249217	EG224916	XM_974172.2	XM_974172.2		224916	149269391	XM_974172.2	EG224916	XP_979266.2	ILMN_1217085	005720739	S	2344	GCTATGGGAACGTTAACTGTGGCATTTTGGGCCAGGAACCTGCCTGACAT				17qD	PREDICTED: Mus musculus predicted gene, EG224916 (EG224916), mRNA.					
Mus musculus	MEEBO	ILMN_187904	ILMN_187904	JUP	scl39567.14_13				28395017	NM_010593	Jup		ILMN_2448137	001470603	S	12	CAGCAGGCTGGCCAAAAAGGGCGCATTAATCTCTGTGGCATCGATGGTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191005	ILMN_191005	TNFSF14	NM_019418.1	NM_019418.1		50930	9507194	NM_019418.1	Tnfsf14	NP_062291.1	ILMN_2851576	006250619	S	1653	GAATCCCTGGTACCCATATAAAGACACAGATGCGGTGATGGGCACTTGTG	17	-	56874986-56875035	17qD	Mus musculus tumor necrosis factor (ligand) superfamily, member 14 (Tnfsf14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	LTg; HVEM-L; Ly113; LIGHT; HVEML	LTg; HVEM-L; Ly113; LIGHT; HVEML
Mus musculus	RefSeq	ILMN_191005	ILMN_191005	TNFSF14	NM_019418.1	NM_019418.1		50930	9507194	NM_019418.1	Tnfsf14	NP_062291.1	ILMN_2851575	004010735	S	1480	CGGCAGGGAGGAGGTGACACCCTTGGGGATACTTTAGTCAACACACTTAG	17	-	56875159-56875208	17qD	Mus musculus tumor necrosis factor (ligand) superfamily, member 14 (Tnfsf14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	LTg; HVEM-L; Ly113; LIGHT; HVEML	LTg; HVEM-L; Ly113; LIGHT; HVEML
Mus musculus	MEEBO	ILMN_212937	ILMN_212937	2900005I04RIK	scl54073.1.1_48	XM_358388.1			38087183	XM_358388.1	2900005I04Rik		ILMN_2631791	000130037	S	780	GAAGCTCATTCTTGAGGGGTCATTGCCACATCCCTCTGATTTCATGTGTT										
Mus musculus	RefSeq	ILMN_210871	ILMN_210871	PLEKHG2	NM_138752.2	NM_138752.2		101497	144922715	NM_138752.2	Plekhg2	NP_620091.2	ILMN_1246655	007200086	S	3933	AGCTGTTGTTGGTGGCCGGCCTGTCAGCCCTTTGCCAGTGTGCACAAGTA	7	-	29148039-29148088	7qA3	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 2 (Plekhg2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	AI194308; Clg; Cslg	AI194308; Clg; Cslg
Mus musculus	RefSeq	ILMN_210871	ILMN_210871	PLEKHG2	NM_138752.2	NM_138752.2		101497	144922715	NM_138752.2	Plekhg2	NP_620091.2	ILMN_2738054	002970132	S	4898	AAGAACTTTCTTCACCAGGTGCCACCTATCCTTATGACATCCAGAGCCTG	7	-	29147172-29147221	7qA3	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 2 (Plekhg2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	AI194308; Clg; Cslg	AI194308; Clg; Cslg
Mus musculus	Riken	ILMN_205215	ILMN_205215	E130012F07RIK	ri|E130012F07|PX00208E23|AK053370|4495					AK053370	E130012F07Rik		ILMN_1217733	006450706	S	4277	GCAGGTGGGGCTGGGAGACTGCTCTATAAATCAAGTGCTTGTCATGCAGC										
Mus musculus	Riken	ILMN_202403	ILMN_202403	4930599N23RIK	ri|4930599N23|PX00037E01|AK016417|881					AK016417	4930599N23Rik		ILMN_1258612	004010288	S	587	TGCCATGGACAGCATGCCCTGAATAGCTTCTTCCTCTGTGCTCGTCGAGA										
Mus musculus	RefSeq	ILMN_186673	ILMN_313138	LOC100047473	XM_001478215.1	XM_001478215.1		100047473	149271313	XM_001478215.1	LOC100047473	XP_001478265.1	ILMN_1218723	001500753	S	680	TAAACATCTTTAATCATTTTCTTATTTAAGTGTAAGAGCCTGTTTATATT					PREDICTED: Mus musculus similar to X-linked lymphocyte-regulated protein pM1 (LOC100047473), mRNA.					
Mus musculus	RefSeq	ILMN_261242	ILMN_261242	AU017455	NM_001033215.1	NM_001033215.1		105590	85701613	NM_001033215.1	AU017455	NP_001028387.1	ILMN_2910438	007380348	S	2452	CCTAGGCCAGCACTTCCTATGTTCTCAGGTCACACTCAAACTGGTGACAC	14	-	77946688-77946737	14qD3	Mus musculus expressed sequence AU017455 (AU017455), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_192108	ILMN_192108	MELA	scl0017276.1_169				6715563	NM_008581	Mela		ILMN_1230488	005550768	S	2218	GCCCTGGTTCTGACTCAACAATATCATCAACTTAAGACAATAGGAGATTG						The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]		Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time [goid 3964] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192108	ILMN_192108	MELA	scl0017276.1_169				6715563	NM_008581	Mela		ILMN_2485074	004010520	S	20	AATTTGATTAGAAAATAAGAAATGCTAAAGTGGCTGTGGCCATTATTGAG						The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]		Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time [goid 3964] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192108	ILMN_192108	MELA	scl0017276.1_169				6715563	NM_008581	Mela		ILMN_1251419	006520315	S	2654	TATTGCTGCCCAGCTCTATAAAAAGGGTAAGAACCCCACACTCGGCGCGC						The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]		Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time [goid 3964] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192108	ILMN_192108	MELA	scl0017276.1_169				6715563	NM_008581	Mela		ILMN_1255287	003940129	S	2602	GCCTCATTTAAACTAACCAATCAGCTCGCTTCTCGCTTCTGTACCCGCGC						The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]		Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time [goid 3964] [evidence IEA]		
Mus musculus	MEEBO	ILMN_220159	ILMN_220159	1700020N15RIK	scl54191.2.1_0				51772099	XM_135879	1700020N15Rik		ILMN_1247263	002600709	S	437	CCACCCTGACCAGTATGCAACTGTGAAGACAGCAACTTTGCAGCCCCTGG										
Mus musculus	RefSeq	ILMN_220294	ILMN_248340	4933437F05RIK	NM_027744.1	NM_027744.1		71275	116812876	NM_027744.1	4933437F05Rik	NP_082020.1	ILMN_1226545	001240035	S	1016	CCCAGAATCCTGCCCCCAGTTTAATTTAACAGATTTCATGAGCAAAAGCT	12	-	88564019-88564068	12qD2	Mus musculus RIKEN cDNA 4933437F05 gene (4933437F05Rik), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [evidence IEA]	MGC118344	MGC118344
Mus musculus	RefSeq	ILMN_216884	ILMN_216884	STRA8	NM_009292.1	NM_009292.1		20899	6678172	NM_009292.1	Stra8	NP_033318.1	ILMN_1239462	005860343	S	1344	CCAGTAGCTAGAGTTATACTGCCTTGTCTTTCAAGACTCATTGAGAAAGG	6	+	34889231-34889280	6qB1	Mus musculus stimulated by retinoic acid gene 8 (Stra8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a female [goid 7066] [evidence IMP]; The cell cycle process whereby double-strand breaks are generated at defined hotspots throughout the genome during meiosis I. This results in the initiation of meiotic recombination [goid 42138] [evidence IMP]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence IMP]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IMP]; The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 48599] [evidence IMP]; Compaction of chromatin structure prior to meiosis in eukaryotic cells [goid 10032] [evidence IMP]; A signal transduction based surveillance mechanism that acts during a meiotic cell cycle and prevents the initiation of mitosis until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the haploid genome [goid 33315] [evidence IMP]			
Mus musculus	MEEBO	ILMN_185403	ILMN_185403	F830005D05RIK	scl16558.1.7_294						F830005D05Rik		ILMN_2426752	000050128	S	17	GACCCACAAAGTCCACCTTTTACTGACCATACACTCAAGAGTGTGAGGCC										
Mus musculus	RefSeq	ILMN_212849	ILMN_212849	PPAP2B	NM_080555.2	NM_080555.2		67916	86262159	NM_080555.2	Ppap2b	NP_542122.1	ILMN_1247753	001660687	S	548	AACAACCCGAGGAAGGGCGGCAGCAAGCGGGTGCTGCTCATCTGCCTGGA	4	+	104830499-104830548	4qC6	Mus musculus phosphatidic acid phosphatase type 2B (Ppap2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IDA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = a lipid + phosphate [goid 42577] [evidence IMP]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Ppab2b; D4Bwg1535e; AV025606; Lpp3; 1110003O22Rik; D4Bwg0538e; 2610002D05Rik	Ppab2b; D4Bwg1535e; AV025606; Lpp3; 1110003O22Rik; D4Bwg0538e; 2610002D05Rik
Mus musculus	RefSeq	ILMN_212849	ILMN_212849	PPAP2B	NM_080555.2	NM_080555.2		67916	86262159	NM_080555.2	Ppap2b	NP_542122.1	ILMN_2630993	002000551	S	1453	CTGCACGTTCCTGCTGCTCTCCGATCTCATCAGACAGTAGAATGTAGGGA	4	+	104903663-104903712	4qC6	Mus musculus phosphatidic acid phosphatase type 2B (Ppap2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IDA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = a lipid + phosphate [goid 42577] [evidence IMP]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Ppab2b; D4Bwg1535e; AV025606; Lpp3; 1110003O22Rik; D4Bwg0538e; 2610002D05Rik	Ppab2b; D4Bwg1535e; AV025606; Lpp3; 1110003O22Rik; D4Bwg0538e; 2610002D05Rik
Mus musculus	RefSeq	ILMN_220274	ILMN_220274	ACTL7A	NM_009611.2	NM_009611.2		11470	142350072	NM_009611.2	Actl7a	NP_033741.1	ILMN_2720021	000010286	S	1401	GGCTGAACCTTCTACAAGTGGTGTTGAGTTGGCATGTTCATTTCTGTAGC	4	+	56757719-56757768	4qB3	Mus musculus actin-like 7a (Actl7a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Tact2	Tact2
Mus musculus	RefSeq	ILMN_216636	ILMN_216636	FIP1L1	NM_024183.3	NM_024183.3		66899	31581577	NM_024183.3	Fip1l1	NP_077145.2	ILMN_2985381	000070181	S	2457	CTGCTGTTAGTATGTTTTCCAAGGATCAACGGTAGCGTAGGACGTGGGGG	5	+	74878339-74878388	5qC3.3	Mus musculus FIP1 like 1 (S. cerevisiae) (Fip1l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Rje; 1300019H17Rik	Rje; 1300019H17Rik
Mus musculus	MEEBO	ILMN_185919	ILMN_185919	1700061I17RIK	scl073362.2_30						1700061I17Rik		ILMN_2431113	002900484	S	4	CGGGGGACAAAGCAACCAATTAAAGGCATCTTTCCTTGGATTTGACTTAC										
Mus musculus	Riken	ILMN_203142	ILMN_203142	9030411M15RIK	ri|6030431I23|PX00056L16|AK031437|2964					AK031437	9030411M15Rik		ILMN_1257493	001440400	S	2664	GAGGTGCCTTTCTCATTTCCATCTGCAGGGGGCGCTGTTCATGCCTGCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_195299	ILMN_195299	EGR3	scl46131.3_126				9055211	NM_018781	Egr3		ILMN_1227494	000020612	S	1	GAAGCGGTGTAATGTTGCCCCATTTGCCTTGTGAGCAAATGCCAATACAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200281	ILMN_200281	LOC386129	XM_359082.1	XM_359082.1			38081210	XM_359082.1	LOC386129		ILMN_1227368	004560176	S	8	CACCTGAGGAGGCCACACGGTTCACAAGGAAGTCGAGTAATAGCCCTTCC										
Mus musculus	MEEBO	ILMN_223954	ILMN_223954	ERBB4	scl0013869.1_195				51705067	XM_136682	Erbb4		ILMN_2772217	006650010	S	804	GTTCAATGCAAAGTACACGTATGGAGCATTCTGTGTTAAGAAATGTCCTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185114	ILMN_314031	LOC100042815	XM_001478871.1	XM_001478871.1		100042815	149268644	XM_001478871.1	LOC100042815	XP_001478921.1	ILMN_1226973	006290561	S	159	CTCTTGTCACGCAGCGCACCAGCAGAGCCACATACATCTATGAACAACAG	17	+	29230519-29230568	17qA3.3	PREDICTED: Mus musculus hypothetical protein LOC100042815 (LOC100042815), mRNA.					
Mus musculus	RefSeq	ILMN_196830	ILMN_196830	K20D4	XM_137789.1	XM_137789.1			20883539	XM_137789.1	K20D4		ILMN_1240743	006760646	S	188	GTGTTCCTCATCCACGAGGGCCCGAAGAATGCGTGTGTCGTTGGAATGAC										
Mus musculus	RefSeq	ILMN_222949	ILMN_222949	PCTK1	NM_011049.4	NM_011049.4		18555	146134389	NM_011049.4	Pctk1	NP_035179.1	ILMN_2757150	006060040	S	2735	GCTGTTGAGTAGGGGCTCTGCCAGGAATTGACCAGCTTAGTGAGGAGCCA				XqA1.3	Mus musculus PCTAIRE-motif protein kinase 1 (Pctk1), mRNA. XM_920756 XM_920762 XM_920768 XM_920773		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Pctaire1; Crk5	Pctaire1; Crk5
Mus musculus	Riken	ILMN_203286	ILMN_203286	9530014N24RIK	ri|9530014N24|PX00111F18|AK035319|1432					AK035319	9530014N24Rik		ILMN_1241783	004260075	S	1237	AGTGTTGAACCAGAGGCTGGAATGATGGTGTAGTGGTCAAGAGTGCCGGC										
Mus musculus	Riken	ILMN_206120	ILMN_206120	C630017J20RIK	ri|C630017J20|PX00084A08|AK083148|3344					AK083148	C630017J20Rik		ILMN_1218694	005890630	S	3272	CACAGTCTCAGAACTCAGGAAGTGGAGGGCTATGCAGTTGGAGGCCAGGC										
Mus musculus	RefSeq	ILMN_255956	ILMN_255956	F830116E18RIK	NM_001033981.1	NM_001033981.1		544763	77020267	NM_001033981.1	F830116E18Rik	NP_001029153.1	ILMN_2905525	006350215	S	565	TTGTCCTGGACGCAGAGGGGCACGAGAGAAATATACTCCCCGCGTCCAGT	11	+	32187729-32187778	11qA4	Mus musculus RIKEN cDNA F830116E18 gene (F830116E18Rik), mRNA.		The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]		
Mus musculus	Riken	ILMN_201789	ILMN_201789	2810409M01RIK	ri|2810409M01|ZX00055F22|AK013060|1182					AK013060	2810409M01Rik		ILMN_2544597	002450333	S	735	CACATCGGAAGTCTCTGTTCATGGAACCCTTTGGAAGTGTGTAGCACCAC										
Mus musculus	RefSeq	ILMN_213375	ILMN_312290	LOC100045423	XM_001472536.1	XM_001472536.1		100045423	149274409	XM_001472536.1	LOC100045423	XP_001472586.1	ILMN_1247746	004890435	S	306	CGTCTGGTGGTACAGAACAACGAACAGCTCCGCCAACTCTTCAAACCAGG					PREDICTED: Mus musculus similar to 1700012L04Rik protein (LOC100045423), mRNA.					
Mus musculus	RefSeq	ILMN_216131	ILMN_216131	TMEM16J	NM_178381.2	NM_178381.2		71345	31341630	NM_178381.2	Tmem16j	NP_848468.1	ILMN_1242413	002600070	S	3043	CCCTCCCAGTTAACCTGGATCCGTACAGCGGCAAAACTTTTTACAAGCAA	7	-	148287143-148287192	7qF5	Mus musculus transmembrane protein 16J (Tmem16j), mRNA.				5430425C04Rik; Tp53i5; Trp53i5	5430425C04Rik; Tp53i5; Trp53i5
Mus musculus	RefSeq	ILMN_236731	ILMN_236731	AA467197	NM_001004174.1	NM_001004174.1		433470	51921340	NM_001004174.1	AA467197	NP_001004174.1	ILMN_3160750	007160047	S	211	CGGAAAAGAAACCCAGAGCCTTGGGAAATGGTGGATCCTACTCAACCCCA	2	+	122464959-122465008	2qE5	Mus musculus expressed sequence AA467197 (AA467197), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			RP23-101F14.3; Nmes1; MGC58382	RP23-101F14.3; Nmes1; MGC58382
Mus musculus	RefSeq	ILMN_209290	ILMN_209290	SLC25A24	NM_172685.1	NM_172685.1		229731	27369997	NM_172685.1	Slc25a24	NP_766273.1	ILMN_2841710	002650452	S	3086	GGAGGGGACTCTGCTTCATCTTCGGGGTTATTGTATTTTGGAGTAATACC	3	+	109296168-109296217	3qF3	Mus musculus solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 (Slc25a24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2610016M12Rik	2610016M12Rik
Mus musculus	RefSeq	ILMN_218295	ILMN_243089	4921513D23RIK	NM_001081154.1	NM_001081154.1		223989	124487212	NM_001081154.1	4921513D23Rik	NP_001074623.1	ILMN_2694055	003440102	S	6345	GGAAGCTCTCCATGTGAAGATGTGTGTCCATGTTAGTTCATCTGGACGTC	16	-	14110629-14110678	16qA1	Mus musculus RIKEN cDNA 4921513D23 gene (4921513D23Rik), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	mKIAA0430; KIAA0430; LKAP; MGC36956; BC031575; E030019O05	mKIAA0430; KIAA0430; LKAP; MGC36956; BC031575; E030019O05
Mus musculus	Riken	ILMN_206027	ILMN_206027	BRI3	ri|C230092P09|PX00177L17|AK049027|904					AK049027	Bri3		ILMN_1244293	003130445	S	554	GGACTACAGCAACGTTCATGGGTGTCTGTCACCGACTTATCCCTCTGGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_209613	ILMN_209613	LOC380805	IGHV14S1_X03571$M12813_Ig_heavy_variable_14S1_9	XM_138309.2			38073854	XM_138309.2	LOC380805		ILMN_1213332	005310040	S	62	CTTCTTCCTGATGGCAGTGGTTACAGGGGTCAATTCAGAGGTTCAGCTGC										
Mus musculus	Riken	ILMN_202132	ILMN_202132	2900045G02RIK	ri|2900045G02|ZX00068L12|AK013646|1101					AK013646	2900045G02Rik		ILMN_1253699	001230356	S	1039	ACTCGGAGCAGCCTGGTTTATGTAGGGAGCTCCAGGAGAGCCAGGGCTAT										
Mus musculus	MEEBO	ILMN_222627	ILMN_222627	MIPOL1	scl073490.7_28	XM_354672.1			38050394	XM_354672.1	Mipol1		ILMN_2752479	004540201	S	865	GGAATGTAGGAAGAGAATAACCGCAGAAGAAATGAGTGCAGTCCTAGAGG										
Mus musculus	RefSeq	ILMN_261475	ILMN_261475	4931432M23RIK	NM_027640.1	NM_027640.1		70993	110625795	NM_027640.1	4931432M23Rik	NP_081916.1	ILMN_2824364	000270152	S	737	TGGCAGACTACAGCGACTGGATCACGGCCAAGACGAGGAAGGCTGGCCCT	8	-	98083557-98083606	8qD1	Mus musculus RIKEN cDNA 4931432M23 gene (4931432M23Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Klkbl4	Klkbl4
Mus musculus	RefSeq	ILMN_196530	ILMN_261475	4931432M23RIK	NM_027640.1	NM_027640.1		70993	110625795	NM_027640.1	4931432M23Rik	NP_081916.1	ILMN_1239366	000150600	S	950	AGGATGCTGGGCAGAACTTCAGGGTAAACAGGCAACCGGAAACCAGCGGG	8	-	98083344-98083393	8qD1	Mus musculus RIKEN cDNA 4931432M23 gene (4931432M23Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Klkbl4	Klkbl4
Mus musculus	RefSeq	ILMN_197101	ILMN_256240	SH2D1B2	NM_001033499.1	NM_001033499.1		545378	75677447	NM_001033499.1	Sh2d1b2	NP_001028671.1	ILMN_1257907	007570079	S	311	GCGGCTTCTGTCCAGGAGCGAGAAGACTGAACTTAGAGGCGAATGTTTAC	1	+	172180272-172180321	1qH3	Mus musculus SH2 domain protein 1B2 (Sh2d1b2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity [goid 45953] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	EAT-2B; Ert; Sh2d1c; Eat2b	EAT-2B; Ert; Sh2d1c; Eat2b
Mus musculus	RefSeq	ILMN_256240	ILMN_256240	SH2D1B2	NM_001033499.1	NM_001033499.1		545378	75677447	NM_001033499.1	Sh2d1b2	NP_001028671.1	ILMN_2915800	005310646	S	308	GAAGCGGCTTCTGTCCAGGAGCGAGAAGACTGAACTTAGAGGCGAATGTT	1	+	172180269-172180318	1qH3	Mus musculus SH2 domain protein 1B2 (Sh2d1b2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity [goid 45953] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	EAT-2B; Ert; Sh2d1c; Eat2b	EAT-2B; Ert; Sh2d1c; Eat2b
Mus musculus	RefSeq	ILMN_198781	ILMN_242470	OLFR525	NM_146956.1	NM_146956.1		258958	49227554	NM_146956.1	Olfr525	NP_667167.1	ILMN_2532905	003840347	S	275	TTTCTTATAAGGGATGCATGACCCAACTCTTTTTCCTGACCTGGTTTCTA	7	+	147508874-147508923	7qF4	Mus musculus olfactory receptor 525 (Olfr525), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR251-2	MOR251-2
Mus musculus	RefSeq	ILMN_242470	ILMN_242470	OLFR525	NM_146956.1	NM_146956.1		258958	49227554	NM_146956.1	Olfr525	NP_667167.1	ILMN_2844107	005570592	S	815	AAGTAGTTGCTTTATTGTACACAGCAGTCAGCCCTACCCTGAACCCCGCC	7	+	147509414-147509463	7qF4	Mus musculus olfactory receptor 525 (Olfr525), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR251-2	MOR251-2
Mus musculus	RefSeq	ILMN_201037	ILMN_242470	OLFR525	NM_146956.1	NM_146956.1		258958	49227554	NM_146956.1	Olfr525	NP_667167.1	ILMN_2540868	005720709	S	155	ACTCAAGCCTTCACACCCCCATGTACTTCTTCCTTGCAAACCTGGCCCTG	7	+	147508754-147508803	7qF4	Mus musculus olfactory receptor 525 (Olfr525), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR251-2	MOR251-2
Mus musculus	RefSeq	ILMN_217752	ILMN_312115	ARFGEF1	XM_001473166.1	XM_001473166.1		211673	149233651	XM_001473166.1	Arfgef1	XP_001473216.1	ILMN_2687111	002630564	S	6491	ACATCCCTGCTGACAAGACCTACCTGTGACATACTCACTCTCTTAGGGCT				1qA2	PREDICTED: Mus musculus ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) (Arfgef1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_217752	ILMN_312115	ARFGEF1	XM_001473166.1	XM_001473166.1		211673	149233651	XM_001473166.1	Arfgef1	XP_001473216.1	ILMN_2718681	003800411	S	3055	GTCTCCAAGACTGTGATGATACTGAAGTAGCCTCTCTTTGCCTAGAAGGG				1qA2	PREDICTED: Mus musculus ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) (Arfgef1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_200608	ILMN_200608	LOC384389	XM_357616.1	XM_357616.1			38084267	XM_357616.1	LOC384389		ILMN_2539356	002190730	S	286	GTCCAGGACACGCGACCCCCAGAAGAAATTCTGGCAGATGAGTTGCCACA										
Mus musculus	RefSeq	ILMN_186378	ILMN_251607	MRC2	NM_008626.3	NM_008626.3		17534	113930719	NM_008626.3	Mrc2	NP_032652.3	ILMN_2639981	000430242	S	3637	TACACACAAGCCTTCCTCACACAGGCTGCACGGGGGCTGCAAACACCACT	11	+	105208713-105208762	11qE1	Mus musculus mannose receptor, C type 2 (Mrc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence ISA]	MGC141530; Endo180; uPARAP; mKIAA0709	MGC141530; Endo180; uPARAP; mKIAA0709
Mus musculus	MEEBO	ILMN_184621	ILMN_184621	GLS	scl17981.2_57				51704991	XM_129846	Gls		ILMN_1222199	005050243	S	3029	AATGTCTGCATCAAGATAGCACCCCTTTGTGGGAGGCCCTGAGTATCTTC							The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6543] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [evidence IMP]		
Mus musculus	MEEBO	ILMN_184621	ILMN_184621	GLS	scl17981.2_57				51704991	XM_129846	Gls		ILMN_2420155	004050209	S	6	GCTGGGGAATGCATATGAACACCAAAGGGGCAGGACAGCCAGCCTTTCTA							The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6543] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [evidence IMP]		
Mus musculus	RefSeq	ILMN_209232	ILMN_209232	STATIP1	NM_021448.1	NM_021448.1		58523	10946827	NM_021448.1	Statip1	NP_067423.1	ILMN_2894751	004280255	S	2416	GGGCCGGAGTGGTTGCATTTTGCAAGCTGTGGCGAGGACCATACCGTGAA	18	+	24781501-24781550	18qA2	Mus musculus signal transducer and activator of transcription interacting protein 1 (Statip1), mRNA.				Elp2; StIP1; AU023723	Elp2; StIP1; AU023723
Mus musculus	RefSeq	ILMN_198766	ILMN_198766	LOC215633	XM_136045.2	XM_136045.2			38087314	XM_136045.2	LOC215633		ILMN_1256096	002710364	S	171	GGACGTGCAGACCATCCCATGGCTTCCTGACCCTCAGCATTATATTTGGG										
Mus musculus	RefSeq	ILMN_198816	ILMN_198816	GM1865	XM_284307.7	XM_284307.7		330539	149257290	XM_284307.7	Gm1865	XP_284307.6	ILMN_1245873	001440075	S	186	CTTGGCATCTGTCCCTTCTGACCTGAATGCTCAGGTGACTTACAGCCTGG	7	-	60335801-60335850	7qB5	PREDICTED: Mus musculus gene model 1865, (NCBI) (Gm1865), mRNA.					
Mus musculus	MEEBO	ILMN_195261	ILMN_195261	TLR6	scl26559.2_635	NM_011604.1			6755814	NM_011604.1	Tlr6		ILMN_1254605	000730402	S	2	GGGCTCTCATGAACACTGTGGTTTTCAGTTCCTACCTGGAGGTACTTCTG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of JUN kinase activity [goid 43507] [evidence ISO]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 8034] [evidence IMP]		
Mus musculus	RefSeq	ILMN_200865	ILMN_200865	LOC384614	XM_357744.1	XM_357744.1			38086658	XM_357744.1	LOC384614		ILMN_2540276	004150288	S	1049	GGCCGACACAGTTTACAAAAGATGACAGATTAAGTTGGTTTGATCCATCC										
Mus musculus	RefSeq	ILMN_213112	ILMN_213112	RAB34	NM_033475.2	NM_033475.2		19376	31560773	NM_033475.2	Rab34	NP_258436.2	ILMN_3029294	003990131	I	823	CACGGCTGGTCAGGAAAGGTTCAAGTGCATTGCTTCCACCTACTACCGTG	11	+	78002656-78002705	11qB5	Mus musculus RAB34, member of RAS oncogene family (Rab34), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]	Rah1; AI326479; Rah	Rah1; AI326479; Rah
Mus musculus	RefSeq	ILMN_213112	ILMN_213112	RAB34	NM_033475.2	NM_033475.2		19376	31560773	NM_033475.2	Rab34	NP_258436.2	ILMN_2633777	003310209	S	1542	CTCAGCCTGCTGGGCCTTTCATGTATAAAAATGCTTAATGATTTTAGCCT	11	+	78003801-78003850	11qB5	Mus musculus RAB34, member of RAS oncogene family (Rab34), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]	Rah1; AI326479; Rah	Rah1; AI326479; Rah
Mus musculus	RefSeq	ILMN_213112	ILMN_213112	RAB34	NM_033475.2	NM_033475.2		19376	31560773	NM_033475.2	Rab34	NP_258436.2	ILMN_3102467	001780025	A	1453	CCCAGGCACCATGCCAAAGACTGGATGACCCTCTGTTCCTCTGGGGCTCT	11	+	78003813-78003862	11qB5	Mus musculus RAB34, member of RAS oncogene family (Rab34), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]	Rah1; AI326479; Rah	Rah1; AI326479; Rah
Mus musculus	RefSeq	ILMN_209211	ILMN_209211	SLC4A3	NM_009208.2	NM_009208.2		20536	142378544	NM_009208.2	Slc4a3	NP_033234.1	ILMN_2675029	001820538	S	3791	GCTGGACTCTGAAGATGCGGAGCCGAACTTTGACGAGGATGGTCAGGACG	1	+	75554374-75554375:75555388-75555435	1qC4	Mus musculus solute carrier family 4 (anion exchanger), member 3 (Slc4a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 15380] [evidence IEA];  [goid 5452] [evidence IEA]	Ae3; A930038D23Rik	Ae3; A930038D23Rik
Mus musculus	RefSeq	ILMN_209211	ILMN_209211	SLC4A3	NM_009208.2	NM_009208.2		20536	142378544	NM_009208.2	Slc4a3	NP_033234.1	ILMN_2593621	005810446	S	940	CTGACGAGGCGGAGGCTCAAATGTTGGGTTCTGCCGATCTGGACGACATG	1	+	75545586-75545635	1qC4	Mus musculus solute carrier family 4 (anion exchanger), member 3 (Slc4a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 15380] [evidence IEA];  [goid 5452] [evidence IEA]	Ae3; A930038D23Rik	Ae3; A930038D23Rik
Mus musculus	RefSeq	ILMN_213062	ILMN_213062	SPATS1	NM_027649.2	NM_027649.2		71020	142368476	NM_027649.2	Spats1	NP_081925.1	ILMN_1247027	001440497	S	831	ACGAGATAAAAGAAGTCGAGGAGCTTGACAACTGGCAGGTGCCGATGCCC	17	-	45586408-45586457	17qB3	Mus musculus spermatogenesis associated, serine-rich 1 (Spats1), mRNA.				4933400B06Rik; 1700011H05Rik; Srsp1; Daip2	4933400B06Rik; 1700011H05Rik; Srsp1; Daip2
Mus musculus	RefSeq	ILMN_223288	ILMN_223288	NOL9	NM_028727.1	NM_028727.1		74035	21311970	NM_028727.1	Nol9	NP_083003.1	ILMN_3160348	001010360	S	2134	CCGTGTTCCAAAGTGATGAGCGAGATTGTCTATAAAAGGCCCTGCCAAGG	4	+	151435464-151435513	4qE2	Mus musculus nucleolar protein 9 (Nol9), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	6030462G04Rik; AI449622; 4632412I24Rik; AW490720; MGC159135	6030462G04Rik; AI449622; 4632412I24Rik; AW490720; MGC159135
Mus musculus	Riken	ILMN_206411	ILMN_206411	C230015M01RIK	ri|C230015M01|PX00173H22|AK082155|1835					AK082155	C230015M01Rik		ILMN_1259171	007380121	S	1574	TCGACTCAAGGGTGTCAACACTCAGTCCCCAGCTGCTGATCCTGTTTGGG										
Mus musculus	RefSeq	ILMN_188056	ILMN_188056	VLDLR	NM_013703.1	NM_013703.1		22359	7305628	NM_013703.1	Vldlr	NP_038731.1	ILMN_2515601	004480639	S	3	TACCAAGTATCTGTAACCCTTGAGCCCCTAGACAGTATTGCCATCTCTGG	19	+	27291924-27291973	19qC1	Mus musculus very low density lipoprotein receptor (Vldlr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW047288; AI451093; AA408956	AW047288; AI451093; AA408956
Mus musculus	RefSeq	ILMN_193168	ILMN_188056	VLDLR	NM_013703.1	NM_013703.1		22359	7305628	NM_013703.1	Vldlr	NP_038731.1	ILMN_2494669	006940343	S	230	AGCACAGCGCGAGCAGCAGCCACAGCGCCCAGCGCGCGGACGTGCCCATG	19	+	27292151-27292186:27304686-27304699	19qC1	Mus musculus very low density lipoprotein receptor (Vldlr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW047288; AI451093; AA408956	AW047288; AI451093; AA408956
Mus musculus	RefSeq	ILMN_188056	ILMN_188056	VLDLR	NM_013703.1	NM_013703.1		22359	7305628	NM_013703.1	Vldlr	NP_038731.1	ILMN_2796472	005900577	S	3121	CTCCCACCTGTACATACATTGTATAGGCCACCTGTACATATCCCAGAGAA	19	+	27323946-27323995	19qC1	Mus musculus very low density lipoprotein receptor (Vldlr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW047288; AI451093; AA408956	AW047288; AI451093; AA408956
Mus musculus	RefSeq	ILMN_188056	ILMN_188056	VLDLR	NM_013703.1	NM_013703.1		22359	7305628	NM_013703.1	Vldlr	NP_038731.1	ILMN_1230923	001260347	S	565	CCCCGTGTCCTGGAGATGCGATGGTGAAAATGATTGTGACAATGGAGAAG	19	+	27310786-27310835	19qC1	Mus musculus very low density lipoprotein receptor (Vldlr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW047288; AI451093; AA408956	AW047288; AI451093; AA408956
Mus musculus	RefSeq	ILMN_188056	ILMN_188056	VLDLR	NM_013703.1	NM_013703.1		22359	7305628	NM_013703.1	Vldlr	NP_038731.1	ILMN_2458671	004040296	S	182	ATGGGCACGTCCGCGCGCTGGGCGCTGTGGCTGCTGCTCGCGCTGTGCTG	19	+	27292103-27292104:27292105-27292152	19qC1	Mus musculus very low density lipoprotein receptor (Vldlr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW047288; AI451093; AA408956	AW047288; AI451093; AA408956
Mus musculus	RefSeq	ILMN_188056	ILMN_188056	VLDLR	NM_013703.1	NM_013703.1		22359	7305628	NM_013703.1	Vldlr	NP_038731.1	ILMN_1218264	004070201	S	5	CCAAGTATCTGTAACCCTTGAGCCCCTAGACAGTATTGCCATCTCTGGCC	19	+	27291926-27291975	19qC1	Mus musculus very low density lipoprotein receptor (Vldlr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW047288; AI451093; AA408956	AW047288; AI451093; AA408956
Mus musculus	RefSeq	ILMN_216902	ILMN_216902	COX6B2	NM_183405.1	NM_183405.1		333182	34536833	NM_183405.1	Cox6b2	NP_899664.1	ILMN_1229627	005080017	S	21	ATCCGGCCTGAGGGTCGTATTTTTTCTCCCGTGCTCTTGGGACCAGCCCT	7	-	4704626-4704675	7qA1	Mus musculus cytochrome c oxidase subunit VIb polypeptide 2 (Cox6b2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any of the inward folds of the mitochondrial inner membrane. Their number, extent, and shape differ in mitochondria from different tissues and organisms. They appear to be devices for increasing the surface area of the mitochondrial inner membrane, where the enzymes of electron transport and oxidative phosphorylation are found. Their shape can vary with the respiratory state of the mitochondria [goid 30061] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC130249; MGC130250; COXVIB2; BC048670	MGC130249; MGC130250; COXVIB2; BC048670
Mus musculus	RefSeq	ILMN_216902	ILMN_216902	COX6B2	NM_183405.1	NM_183405.1		333182	34536833	NM_183405.1	Cox6b2	NP_899664.1	ILMN_2764551	007150309	S	480	ATCAAGCCCCAGCCTGGGTCACCCCCTCCCTCCACTTTGTCTTTGTGCCA	7	-	4703417-4703466	7qA1	Mus musculus cytochrome c oxidase subunit VIb polypeptide 2 (Cox6b2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any of the inward folds of the mitochondrial inner membrane. Their number, extent, and shape differ in mitochondria from different tissues and organisms. They appear to be devices for increasing the surface area of the mitochondrial inner membrane, where the enzymes of electron transport and oxidative phosphorylation are found. Their shape can vary with the respiratory state of the mitochondria [goid 30061] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC130249; MGC130250; COXVIB2; BC048670	MGC130249; MGC130250; COXVIB2; BC048670
Mus musculus	RefSeq	ILMN_209832	ILMN_246415	4930433I11RIK	NM_207248.2	NM_207248.2		243944	141801797	NM_207248.2	4930433I11Rik	NP_997131.1	ILMN_2687716	002750687	S	2352	ACTCTGATAATATTTAATATTAAAGCAATTCATCAATACCTGTAGTGTTA	7	+	48250479-48250528	7qB3	Mus musculus RIKEN cDNA 4930433I11 gene (4930433I11Rik), mRNA.				Gm481	Gm481
Mus musculus	RefSeq	ILMN_209832	ILMN_246415	4930433I11RIK	NM_207248.2	NM_207248.2		243944	141801797	NM_207248.2	4930433I11Rik	NP_997131.1	ILMN_2599632	000630465	S	2143	TGGGCACACCTGTGTTATGTAAGTGTTTGTTTATAGAAATTGACAGACAA	7	+	48250270-48250319	7qB3	Mus musculus RIKEN cDNA 4930433I11 gene (4930433I11Rik), mRNA.				Gm481	Gm481
Mus musculus	RefSeq	ILMN_194213	ILMN_261018	MLKL	NM_029005.2	NM_029005.2		74568	141802525	NM_029005.2	Mlkl	NP_083281.1	ILMN_2504397	002850458	S	1443	CTGCGGTTGAAGAATCCACGGACAAGAAGGTGTAAGAGGACAAAGTGGAC	8	-	113835909-113835924:113835925-113835958	8qE1	Mus musculus mixed lineage kinase domain-like (Mlkl), mRNA. XM_924589		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	9130019I15Rik	9130019I15Rik
Mus musculus	RefSeq	ILMN_248718	ILMN_248718	PLEKHG1	NM_001033253.1	NM_001033253.1		213783	84794545	NM_001033253.1	Plekhg1	NP_001028425.1	ILMN_2919124	006180039	S	4018	CCCGAGGGAGATGAAGATGACTATGTGGAAATCAAGTCAGAAGAGGACGA	10	-	6382360-6382409	10qA1	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 1 (Plekhg1), mRNA. XM_896002 XM_905011 XM_919118 XM_919131 XM_919140 XM_919152 XM_919161				mKIAA1209; D10Ertd733e	mKIAA1209; D10Ertd733e
Mus musculus	MEEBO	ILMN_187582	ILMN_187582	PPP1CB	scl27940.8_13				28173567	NM_172707	Ppp1cb		ILMN_2647627	006580685	S	868	GCTAAACGACAGTTGGTAACCTTATTTTCTGCCCCAAATTACTGTGGCGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]		
Mus musculus	RefSeq	ILMN_185749	ILMN_185749	VGLL2	NM_153786.1	NM_153786.1		215031	24418890	NM_153786.1	Vgll2	NP_722481.1	ILMN_2429680	001740221	S	520	TCTGGCCGCCGCACACTCGGAGCTGCCCTTTGCCACCGACCCCTACTCTC	10	+	51747331-51747380	10qB3	Mus musculus vestigial like 2 homolog (Drosophila) (Vgll2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	C130057C21Rik; VITO-1	C130057C21Rik; VITO-1
Mus musculus	RefSeq	ILMN_185749	ILMN_185749	VGLL2	NM_153786.1	NM_153786.1		215031	24418890	NM_153786.1	Vgll2	NP_722481.1	ILMN_2909248	007400441	S	1057	ACCACCTCCCTCTACCCCCCAGGACCATGTGGCTGAGAGATTGCATGCCA	10	+	51747868-51747917	10qB3	Mus musculus vestigial like 2 homolog (Drosophila) (Vgll2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	C130057C21Rik; VITO-1	C130057C21Rik; VITO-1
Mus musculus	RefSeq	ILMN_185749	ILMN_185749	VGLL2	NM_153786.1	NM_153786.1		215031	24418890	NM_153786.1	Vgll2	NP_722481.1	ILMN_2495753	006200689	S	1119	ACGGGTAGATGTCTTTAGGAAGTAGCACCCTGCCCTCGGTCTGGCTGGGT	10	+	51747930-51747979	10qB3	Mus musculus vestigial like 2 homolog (Drosophila) (Vgll2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	C130057C21Rik; VITO-1	C130057C21Rik; VITO-1
Mus musculus	RefSeq	ILMN_217934	ILMN_217934	ABCA2	NM_007379.2	NM_007379.2		11305	110225378	NM_007379.2	Abca2	NP_031405.2	ILMN_1216987	002970296	S	7511	TCCTGCCCTCCTCCCAACTACCATCCTCCCCGAATTGTGCCAAAGGCTGG	2	+	25303509-25303558	2qA3	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 2 (Abca2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence ISO]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	Abc2; mKIAA1062; AI413825; D2H0S1474E	Abc2; mKIAA1062; AI413825; D2H0S1474E
Mus musculus	RefSeq	ILMN_202286	ILMN_261020	4931428F04RIK	NM_028888.1	NM_028888.1		74356	58037370	NM_028888.1	4931428F04Rik	NP_083164.1	ILMN_1231555	004850435	S	1723	GCCGCCTGCTGCCTGACTGATGTTGACTAAGGGTTATAGACAGACGCTCT	8	-	107805849-107805879:107805880-107805898	8qD3	Mus musculus RIKEN cDNA 4931428F04 gene (4931428F04Rik), mRNA.				AI426165	AI426165
Mus musculus	Riken	ILMN_204192	ILMN_204192	C730029F17RIK	ri|C730029F17|PX00087D15|AK050233|2474					AK050233	C730029F17Rik		ILMN_1227642	005290605	S	2124	AGGCAGGCGTTTTCCTTGTCTGGTGGGAACTGCATGGGACGTGCGCATCT										
Mus musculus	RefSeq	ILMN_217979	ILMN_217979	HNRPDL	NM_016690.2	NM_016690.2		50926	31542959	NM_016690.2	Hnrpdl	NP_057899.1	ILMN_2903440	003190092	S	2271	CTTTGTCCTTTGCTACCTGTGTTATGATGACTCAATGTGGCTTTGTGTTC	5	-	100275084-100275133	5qE4	Mus musculus heterogeneous nuclear ribonucleoprotein D-like (Hnrpdl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [evidence ISA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	hnRNP-DL; AA407431; JKTBP; D5Ertd650e; D5Wsu145e; AA959857	hnRNP-DL; AA407431; JKTBP; D5Ertd650e; D5Wsu145e; AA959857
Mus musculus	RefSeq	ILMN_217979	ILMN_217979	HNRPDL	NM_016690.2	NM_016690.2		50926	31542959	NM_016690.2	Hnrpdl	NP_057899.1	ILMN_2690061	000380196	S	2042	CTTAAGCAGTCCATGAAAGTGGACCTTTGCACACTTGTGGGGCTGCACAC	5	-	100275313-100275362	5qE4	Mus musculus heterogeneous nuclear ribonucleoprotein D-like (Hnrpdl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [evidence ISA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	hnRNP-DL; AA407431; JKTBP; D5Ertd650e; D5Wsu145e; AA959857	hnRNP-DL; AA407431; JKTBP; D5Ertd650e; D5Wsu145e; AA959857
Mus musculus	RefSeq	ILMN_223539	ILMN_223539	SUPT16H	NM_033618.1	NM_033618.1		114741	15809047	NM_033618.1	Supt16h	NP_291096.1	ILMN_2765463	007150474	S	4119	TGACAAGAAGAGAAGCGGGAAGAAGGCCACACCCACAAGGCTGGGCACTG	14	-	51082654-51082703	14qC2	Mus musculus suppressor of Ty 16 homolog (S. cerevisiae) (Supt16h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	Spt16; Cdc68; Fact140	Spt16; Cdc68; Fact140
Mus musculus	RefSeq	ILMN_211198	ILMN_211198	OLFR921	NM_146782.1	NM_146782.1		258778	22129282	NM_146782.1	Olfr921	NP_666993.1	ILMN_2613530	006550079	S	797	TATCTATTGATCAAGGAAAAATCTCTTCCATTTTTTATACCATTGTGGTT	9	+	38583638-38583687	9qA5.1	Mus musculus olfactory receptor 921 (Olfr921), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR165-8	MOR165-8
Mus musculus	RefSeq	ILMN_217841	ILMN_217841	OLFR934	NM_146442.1	NM_146442.1		258434	33239051	NM_146442.1	Olfr934	NP_666653.1	ILMN_1219001	001770142	S	744	GGCCTTCATGCCAGTAGTCCTCATATACCTCCAGCCTACTCCCAATCCCT	9	-	38789834-38789883	9qA5.1	Mus musculus olfactory receptor 934 (Olfr934), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR224-6	MOR224-6
Mus musculus	RefSeq	ILMN_217450	ILMN_217450	OPRL1	NM_011012.4	NM_011012.4		18389	146134453	NM_011012.4	Oprl1	NP_035142.1	ILMN_2683352	005360154	S	1980	GGTACTGCCACTGCCTGCTCTACCAACCTGGACCACCTTCTCAGCAAGAG				2qH4	Mus musculus opioid receptor-like 1 (Oprl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an opioid, any narcotic derived from or resembling opium, to initiate a change in cell activity [goid 4985] [evidence IEA];  [goid 15051] [evidence IEA]	MOR-C; LC132; XOR1; morc; Oprl; KOR3; ORL1	MOR-C; LC132; XOR1; morc; Oprl; KOR3; ORL1
Mus musculus	RefSeq	ILMN_217450	ILMN_217450	OPRL1	NM_011012.4	NM_011012.4		18389	146134453	NM_011012.4	Oprl1	NP_035142.1	ILMN_1235369	006560338	S	28	TATCTTCGGAGCAGGAGCTAGGAGCCATTCCCAGCCGGAGCAGACCCCAA				2qH4	Mus musculus opioid receptor-like 1 (Oprl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an opioid, any narcotic derived from or resembling opium, to initiate a change in cell activity [goid 4985] [evidence IEA];  [goid 15051] [evidence IEA]	MOR-C; LC132; XOR1; morc; Oprl; KOR3; ORL1	MOR-C; LC132; XOR1; morc; Oprl; KOR3; ORL1
Mus musculus	RefSeq	ILMN_185253	ILMN_185253	ZFP51	NM_009558.3	NM_009558.3		22709	124269709	NM_009558.3	Zfp51	NP_033584.3	ILMN_2425477	006860020	S	2508	AGTCATAAGAATAAGAAACATGGGAAATACTTTAATGAACTTTTAAATCT	17	+	21602463-21602512	17qA3.2	Mus musculus zinc finger protein 51 (Zfp51), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mszf92; Zfp-51; zfec12	mszf92; Zfp-51; zfec12
Mus musculus	MEEBO	ILMN_190349	ILMN_190349	BLOC1S3	scl31682.2_22				31343283	NM_177692	Bloc1s3		ILMN_2751619	001170093	S	1101	AATTCTTAGGCCTTTGTGTCAGGGGCAGCGCCTCCTGGTGTTTTGATCGC						That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198198	ILMN_198198	LOC224914	XM_140057.2	XM_140057.2			38082758	XM_140057.2	LOC224914		ILMN_1235824	006420743	S	10	CCTCCCATTATAGCACCAATCTGCTTTGACATGGCCGAGGAGGCAGACAC										
Mus musculus	Riken	ILMN_205160	ILMN_205160	A630043I21RIK	ri|A630043I21|PX00145M08|AK041877|1117					AK041877	A630043I21Rik		ILMN_2570436	000010370	S	581	TGGTGCCCATCTACAAACGGCAGAGTGGATTCTCAGGGGTGCCCACACAT										
Mus musculus	RefSeq	ILMN_218567	ILMN_218567	NOTCH3	NM_008716.2	NM_008716.2		18131	118130663	NM_008716.2	Notch3	NP_032742.1	ILMN_2697380	005490551	S	7671	TAGACTCACTGGGAAAGGGGTCTTGTCTGCTCAAAGCCTCAACTCCAGGC	17	-	32258060-32258109	17qB1	Mus musculus Notch gene homolog 3 (Drosophila) (Notch3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IC ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW229011	AW229011
Mus musculus	MEEBO	ILMN_219466	ILMN_219466	4933427I22RIK	scl23617.6_299				51709552	XM_489062	4933427I22Rik		ILMN_2709244	005550379	S	930	TCCCCATCTCTAAAAACCTTCTGAGATTGCATCGGAGAGAATGGAAGGCG										
Mus musculus	RefSeq	ILMN_235282	ILMN_235282	OLFR476	NM_146924.1	NM_146924.1		258926	49227562	NM_146924.1	Olfr476	NP_667135.1	ILMN_2993799	001940193	S	266	GACTGGTACTCTCTGTAGCTGCTTGTATAGCCCAATTCTGCATCACAGTG	7	+	115111178-115111227	7qE3	Mus musculus olfactory receptor 476 (Olfr476), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-3	MOR204-3
Mus musculus	RefSeq	ILMN_190611	ILMN_226041	NKD2	NM_028186.3	NM_028186.3		72293	141802218	NM_028186.3	Nkd2	NP_082462.2	ILMN_1228631	005560100	S	2261	GGTATGGGGTCCTCAAGAAGCCACAATTTTCATGGTTCCACCAGCAGGAC	13	-	73957668-73957717	13qC1	Mus musculus naked cuticle 2 homolog (Drosophila) (Nkd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AW212591; 2210403L10Rik	AW212591; 2210403L10Rik
Mus musculus	Riken	ILMN_205290	ILMN_205290	4921530F17RIK	ri|4921530F17|PX00313H08|AK029558|965					AK029558	4921530F17Rik		ILMN_1246080	006020689	S	860	CAACAACAGCCATCCAAGAAAGATCCTTCCTTACAGGTGTGGCACTGGCC										
Mus musculus	MEEBO	ILMN_187521	ILMN_187521	4930521G14RIK	scl44343.1.1_255						4930521G14Rik		ILMN_2444847	000460324	S	20	TAATGATAGGATGTCTCACTGTAAGGCTTCATAAGTTCTTAAACTCTTAG										
Mus musculus	MEEBO	ILMN_208737	ILMN_208737	C820004B04RIK	scl0319363.1_212	NM_176901.2			31342350	NM_176901.2	C820004B04Rik		ILMN_2589033	006040228	S	832	AACGCCAGTGGGGGAGGTCAAGTTCGCAAGTTAGGACATGTGAATGAGCC										
Mus musculus	RefSeq	ILMN_199334	ILMN_199334	LOC385286	XM_358170.1	XM_358170.1			38096498	XM_358170.1	LOC385286		ILMN_1230445	005130209	S	606	CTGTGACACCAGAGTGGAGCAAGTGGACTATGTGAACACCTCAGTGGAGC										
Mus musculus	RefSeq	ILMN_212172	ILMN_212172	A030004J04RIK	NM_175424.3	NM_175424.3		109314	125991229	NM_175424.3	A030004J04Rik	NP_780633.1	ILMN_2623605	003800706	S	1066	GGATACTATGATTCATCTTTAGTTTGTGTTTCTGGGATAGGAGCTGGCTT	3	-	91926193-91926242	3qF1	Mus musculus RIKEN cDNA A030004J04 gene (A030004J04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209333	ILMN_209333	4933434E20RIK	NM_025762.1	NM_025762.1		99650	20270195	NM_025762.1	4933434E20Rik	NP_080038.1	ILMN_2594807	000670358	S	1178	CTGCCCCATTGCACTCAACTGAATAGAAATATTTGGGTTTAGAGCATCTC	3	+	89866059-89866108	3qF1	Mus musculus RIKEN cDNA 4933434E20 gene (4933434E20Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			NS5ATP4; AI462154; 5730552F22Rik; NICE-3	NS5ATP4; AI462154; 5730552F22Rik; NICE-3
Mus musculus	RefSeq	ILMN_209333	ILMN_209333	4933434E20RIK	NM_025762.1	NM_025762.1		99650	20270195	NM_025762.1	4933434E20Rik	NP_080038.1	ILMN_2616956	000110594	S	998	TGGCTAAGACCTCAGTATCTCCCAGTAGCACTTCTTCTGGATTTGAATTC	3	+	89865879-89865928	3qF1	Mus musculus RIKEN cDNA 4933434E20 gene (4933434E20Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			NS5ATP4; AI462154; 5730552F22Rik; NICE-3	NS5ATP4; AI462154; 5730552F22Rik; NICE-3
Mus musculus	RefSeq	ILMN_209333	ILMN_209333	4933434E20RIK	NM_025762.1	NM_025762.1		99650	20270195	NM_025762.1	4933434E20Rik	NP_080038.1	ILMN_1257872	002120201	S	746	CCTGAAATGTCACCAACAACAATCCAGGTCACATACCTGCCTTCCAGTCA	3	+	89865627-89865676	3qF1	Mus musculus RIKEN cDNA 4933434E20 gene (4933434E20Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			NS5ATP4; AI462154; 5730552F22Rik; NICE-3	NS5ATP4; AI462154; 5730552F22Rik; NICE-3
Mus musculus	RefSeq	ILMN_212932	ILMN_212932	CTLA4	NM_009843.3	NM_009843.3		12477	118129863	NM_009843.3	Ctla4	NP_033973.2	ILMN_2631752	005560288	S	1740	CCCCCTACAAGTACTATGGCTCCTCGAAAACACAAAGTTAATGCCACAGG	1	+	60972483-60972532	1qC2	Mus musculus cytotoxic T-lymphocyte-associated protein 4 (Ctla4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		Ctla-4; Cd152; Ly-56	Ctla-4; Cd152; Ly-56
Mus musculus	RefSeq	ILMN_200982	ILMN_200982	LOC381936	XM_355960.1	XM_355960.1			38087624	XM_355960.1	LOC381936		ILMN_1215311	005720209	S	829	GCCCTACTGTGCCCCAGAACTCTTGCAAGCAGTGAAATATGAGGGTCCCC										
Mus musculus	RefSeq	ILMN_221152	ILMN_254645	4921511C04RIK	NM_027580.2	NM_027580.2		70853	141803543	NM_027580.2	4921511C04Rik	NP_081856.1	ILMN_2731621	001300360	S	863	CGTCCCCGCCATTGTTATAGCACTTCCAAATCACAACGTGGCTTCAGAGA	1	+	37234227-37234276	1qB	Mus musculus RIKEN cDNA 4921511C04 gene (4921511C04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_185459	ILMN_253602	PCX	NM_008797.2	NM_008797.2		18563	142351600	NM_008797.2	Pcx	NP_032823.1	ILMN_2748361	007100546	S	3662	ACCCTACCCCAAGCCTCTCAACAGAAGCTGTGCAGCCAGGGCAGGCCCAG	19	+	4621316-4621365	19qA	Mus musculus pyruvate carboxylase (Pcx), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate + HCO3- = ADP + phosphate + oxaloacetate [goid 4736] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [evidence IEA]	Pc	Pc
Mus musculus	RefSeq	ILMN_223888	ILMN_257785	SPARC	NM_009242.3	NM_009242.3		20692	145966848	NM_009242.3	Sparc	NP_033268.1	ILMN_1243212	000510050	S	2006	CCATGCAAACTCTCACAGCAATGTGAAGAGCTTGACAAGTCTTTCAAAAT				11qB1.3	Mus musculus secreted acidic cysteine rich glycoprotein (Sparc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	BM-40; AA517111	BM-40; AA517111
Mus musculus	RefSeq	ILMN_196506	ILMN_196506	4930402K13RIK	XM_135594.2	XM_135594.2			38086064	XM_135594.2	4930402K13Rik		ILMN_2524573	002710528	S	2737	GTGCTCTCACCCCTCAAATGCACAAGAACAGAAAGATGCAGTGCCGACTC										
Mus musculus	MEEBO	ILMN_216976	ILMN_216976	CEBPZ	scl49603.13.1_6	NM_009882.1			6753401	NM_009882.1	Cebpz		ILMN_2677676	001470446	S	2525	TGACGCCAACCCCAAAGCCAATACTAAGAAAAGCAAGAGAAAGAGTGAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_213782	ILMN_213782	P2RY10	NM_172435.3	NM_172435.3		78826	142347647	NM_172435.3	P2ry10	NP_766023.1	ILMN_1224483	007650253	S	212	CTGCTTGCTAAAGGGGCTTTCTATACAGTTGACAAGGAGTAGTGGATGCC	X	+	104285015-104285064	XqD	Mus musculus purinergic receptor P2Y, G-protein coupled 10 (P2ry10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y10; 5830408N17Rik	P2Y10; 5830408N17Rik
Mus musculus	RefSeq	ILMN_199561	ILMN_199561	LOC382728	XM_356644.1	XM_356644.1			38074353	XM_356644.1	LOC382728		ILMN_1236675	006480634	S	1419	CCACAAAGTACAGTCCGTCCCTCCTCGCTGCAAAGTGAGTCCTGACACGC										
Mus musculus	RefSeq	ILMN_223679	ILMN_223679	CHIC2	NM_028850.3	NM_028850.3		74277	146141186	NM_028850.3	Chic2	NP_083126.1	ILMN_2767602	004540154	S	566	CTGTTAATGTGCGGTGGTTGCTTTGTGGCTGCCTGTGCTGCTGCTGCACG				5qC3.3	Mus musculus cysteine-rich hydrophobic domain 2 (Chic2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IDA]	The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis [goid 6893] [evidence TAS]		BTL; 4930502K01Rik; 1700081B18Rik	BTL; 4930502K01Rik; 1700081B18Rik
Mus musculus	RefSeq	ILMN_208748	ILMN_208748	FTSJ1	NM_133991.2	NM_133991.2		54632	46877061	NM_133991.2	Ftsj1	NP_598752.2	ILMN_1249624	002140066	S	1122	GACAGCTGGCCAAGGAACTCCTCCCCCAAGAATGCTCCATCAACAGTGTG	X	-	7822458-7822507	XqA1.1	Mus musculus FtsJ homolog 1 (E. coli) (Ftsj1), mRNA.				Ftsj; AI931847; Ftsjl; Sfc12	Ftsj; AI931847; Ftsjl; Sfc12
Mus musculus	RefSeq	ILMN_208748	ILMN_208748	FTSJ1	NM_133991.2	NM_133991.2		54632	46877061	NM_133991.2	Ftsj1	NP_598752.2	ILMN_3135668	000130431	A	1049	GTACAAATATACTCCACCCACACAGCCCCCCATCGCACCCCCATACCAAG	X	-	7822531-7822580	XqA1.1	Mus musculus FtsJ homolog 1 (E. coli) (Ftsj1), mRNA.				Ftsj; AI931847; Ftsjl; Sfc12	Ftsj; AI931847; Ftsjl; Sfc12
Mus musculus	Riken	ILMN_204298	ILMN_204298	RBM14	ri|B130009O03|PX00156H04|AK044883|2593					AK044883	Rbm14		ILMN_1213455	003120356	S	2530	AACCGAGCAGATACTGGTACTACACCCTTGTTCCTCCAAAACTGCAAGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_195762	ILMN_243640	CYP2C44	XM_925232.2	XM_925232.2		226143	94406267	XM_925232.2	Cyp2c44	XP_930325.1	ILMN_2518467	002140451	S	1199	CGTTTTGGGCAACTCTTAGCGTCACTGAATTACGTCTTACGTGACCCACT				19qC3	PREDICTED: Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 44, transcript variant 3 (Cyp2c44), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221417	ILMN_221417	P2RX2	NM_153400.3	NM_153400.3		231602	142354790	NM_153400.3	P2rx2	NP_700449.2	ILMN_2735318	001500437	S	1815	CCACGTGACTGGGAAACAGACACCTGTGCAAGAAGATAGGCATCTTGCTC	5	-	110769062-110769111	5qF	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 2 (P2rx2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process by which information about a lack of oxygen are received and are converted to a molecular signal by chemoreceptors in the carotid bodies [goid 3029] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbohydrate stimulus [goid 9743] [evidence IMP]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IGI]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IGI]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract [goid 14832] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract [goid 14832] [evidence IGI]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IDA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IGI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IMP]	MGC129149; MGC129148; P2X2a; P2x2	MGC129149; MGC129148; P2X2a; P2x2
Mus musculus	RefSeq	ILMN_209321	ILMN_209321	ETS2	NM_011809.2	NM_011809.2		23872	31542618	NM_011809.2	Ets2	NP_035939.2	ILMN_2594714	007510154	S	3305	CCACATGACATTGCCAAGTTTAACCTGAGTCTTGTCAGCCAACATGACGG	16	+	95940918-95940967	16qC4	Mus musculus E26 avian leukemia oncogene 2, 3' domain (Ets2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	AU022856; Ets-2	AU022856; Ets-2
Mus musculus	RefSeq	ILMN_221204	ILMN_221204	SNRPD3	NM_026095.4	NM_026095.4		67332	118129857	NM_026095.4	Snrpd3	NP_080371.1	ILMN_1244776	001030187	S	262	GGTCGAGTGGCACAGCTGGAACAGGTATATATACGTGGCAGCAAGATCCG	10	+	74980817-74980866	10qC1	Mus musculus small nuclear ribonucleoprotein D3 (Snrpd3), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1700043E15Rik; 2310009E13Rik; SMD3; AW046420	1700043E15Rik; 2310009E13Rik; SMD3; AW046420
Mus musculus	Riken	ILMN_204170	ILMN_204170	PEX3	ri|C820018L10|PX00088O07|AK050562|1813					AK050562	Pex3		ILMN_1250664	003450021	S	1665	GAGTTGGAGGTAAGGTCCAGAACACCCAGAGCTTCATATTGAGACCCTGT						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]			
Mus musculus	RefSeq	ILMN_210977	ILMN_210977	PRPF3	NM_027541.4	NM_027541.4		70767	146141209	NM_027541.4	Prpf3	NP_081817.2	ILMN_2740053	007050278	S	2648	CAGGGCAAAAAGACTACCAAGTTCACCCAGTCAGCCTGGTGCTACCCTCC				3qF2.1	Mus musculus PRP3 pre-mRNA processing factor 3 homolog (yeast) (Prpf3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		3632413F13Rik	3632413F13Rik
Mus musculus	RefSeq	ILMN_210977	ILMN_210977	PRPF3	NM_027541.4	NM_027541.4		70767	146141209	NM_027541.4	Prpf3	NP_081817.2	ILMN_2644792	000610768	S	798	ATCGGGGGTAAAGAAGCGGCGGATACCCCGTTTTGAGGAGGTAGAAGAGG				3qF2.1	Mus musculus PRP3 pre-mRNA processing factor 3 homolog (yeast) (Prpf3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		3632413F13Rik	3632413F13Rik
Mus musculus	RefSeq	ILMN_227353	ILMN_227353	GPR137B	NM_031999.1	NM_031999.1		83924	14269573	NM_031999.1	Gpr137b	NP_114388.1	ILMN_3116885	002650768	A	989	CGAGTCAGAAATCCCACGAAGGATCTTACCAATCCTGGGATGGTCCCCAG	13	-	13453666-13453689:13455711-13455736	13qA1	Mus musculus G protein-coupled receptor 137B (Gpr137b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C80741; D13Abb1e; C730041E01; AW546472; 2310041G17Rik; Tm7sf1; AU016435; C80550	C80741; D13Abb1e; C730041E01; AW546472; 2310041G17Rik; Tm7sf1; AU016435; C80550
Mus musculus	RefSeq	ILMN_227353	ILMN_227353	GPR137B	NM_031999.1	NM_031999.1		83924	14269573	NM_031999.1	Gpr137b	NP_114388.1	ILMN_3042112	004060138	I	85	CCCCAGCCTGATGGAGGCGCCTCCGTGGGAGCCGGTGCGCAATGACTCCC	13	-	13485720-13485760:13485761-13485769	13qA1	Mus musculus G protein-coupled receptor 137B (Gpr137b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C80741; D13Abb1e; C730041E01; AW546472; 2310041G17Rik; Tm7sf1; AU016435; C80550	C80741; D13Abb1e; C730041E01; AW546472; 2310041G17Rik; Tm7sf1; AU016435; C80550
Mus musculus	RefSeq	ILMN_198585	ILMN_233389	MAMLD1	NM_001081354.1	NM_001081354.1		333639	124486842	NM_001081354.1	Mamld1	NP_001074823.1	ILMN_1258866	006580541	S	74	CTGCTGGAGCTCCGCAACACGCCCTGTGTCTAGGTCGTTTGGAAAACGCC	X	+	68303504-68303524:68354660-68354688	XqA7.2	Mus musculus mastermind-like domain containing 1 (Mamld1), mRNA.					
Mus musculus	RefSeq	ILMN_236220	ILMN_236220	WFDC6A	NM_001033240.1	NM_001033240.1		209351	85701745	NM_001033240.1	Wfdc6a	NP_001028412.1	ILMN_2883709	000580537	S	422	GGGAACCCTAACAACTTCCCATCTGAAGGTATCTGCACCGTTGTCTGCAA	2	-	164271498-164271547	2qH3	Mus musculus WAP four-disulfide core domain 6A (Wfdc6a), mRNA.				Gm122	Gm122
Mus musculus	RefSeq	ILMN_189114	ILMN_241742	RP2H	NM_133669.4	NM_133669.4		19889	146149287	NM_133669.4	Rp2h	NP_598430.1	ILMN_2750818	006840324	S	3431	AGCATCTTATTAGTTTACTTCTCTTGCATTAATAGTACTGCTATATTTTG				XqA1.3	Mus musculus retinitis pigmentosa 2 homolog (human) (Rp2h), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI662636	AI662636
Mus musculus	Riken	ILMN_204279	ILMN_204279	FRAP1	ri|9630026H04|PX00115J24|AK036004|2228					AK036004	Frap1		ILMN_2563765	001850403	S	2072	CCATAGAGCAGGCCTTACATCTGTTTGAGCTTGGCACGGCTCTCTCCTGC							The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence ISO]; Any process that reduces cell size [goid 45792] [evidence IGI]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_222100	ILMN_222100	HPX	NM_017371.1	NM_017371.1		15458	23956085	NM_017371.1	Hpx	NP_059067.1	ILMN_2830333	007550673	S	1195	CCCCATGAGAAAGTTGATGGGGCCCTGTGTTTGGACAAGTCTCTTGGCCC	7	-	112740340-112740389	7qE3	Mus musculus hemopexin (Hpx), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IMP]; The chemical reactions and pathways involving hemoglobin, including its uptake and utilization [goid 20027] [evidence IMP]; The chemical reactions and pathways involving heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 42168] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2925] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of immunoglobulin production [goid 2639] [evidence IMP]; Any process that increases the rate, frequency or extent of the series of molecular events generated as a consequence of interferon-gamma binding to a cell surface receptor [goid 60335] [evidence IMP]; Any process that decreases the rate, frequency or extent of a response to interferon-gamma. Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus [goid 60332] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat1 protein [goid 42511] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence ISO]	hx; Hpxn	hx; Hpxn
Mus musculus	RefSeq	ILMN_222100	ILMN_222100	HPX	NM_017371.1	NM_017371.1		15458	23956085	NM_017371.1	Hpx	NP_059067.1	ILMN_2744565	000160242	S	898	CACTGGCCTCAGGGTCCTTCAACAGTAGATGCTGCCTTTTCCTGGGATGA	7	-	112740858-112740907	7qE3	Mus musculus hemopexin (Hpx), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IMP]; The chemical reactions and pathways involving hemoglobin, including its uptake and utilization [goid 20027] [evidence IMP]; The chemical reactions and pathways involving heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 42168] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2925] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of immunoglobulin production [goid 2639] [evidence IMP]; Any process that increases the rate, frequency or extent of the series of molecular events generated as a consequence of interferon-gamma binding to a cell surface receptor [goid 60335] [evidence IMP]; Any process that decreases the rate, frequency or extent of a response to interferon-gamma. Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus [goid 60332] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat1 protein [goid 42511] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence ISO]	hx; Hpxn	hx; Hpxn
Mus musculus	RefSeq	ILMN_209361	ILMN_209361	RNF6	NM_028774.2	NM_028774.2		74132	141803555	NM_028774.2	Rnf6	NP_083050.1	ILMN_1216416	003780725	S	2329	GGGGTCTGCTCAGCGCTGTGTTGCTGGAGCTTCATAGTCAAACGCTTTTC	5	-	147021723-147021772	5qG3	Mus musculus ring finger protein (C3H2C3 type) 6 (Rnf6), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	AA537053; 5730419H05Rik; 1200013I08Rik	AA537053; 5730419H05Rik; 1200013I08Rik
Mus musculus	RefSeq	ILMN_192794	ILMN_312048	LOC100045971	XM_001475674.1	XM_001475674.1		100045971	149255984	XM_001475674.1	LOC100045971	XP_001475724.1	ILMN_2493791	000540181	S	333	TACTTGGAGACGGGAGACACCAAGCCTGTCCAAAGCGTGGCCCTTACGCT					PREDICTED: Mus musculus similar to NARP1 (LOC100045971), mRNA.					
Mus musculus	RefSeq	ILMN_200672	ILMN_200672	LOC384457	XM_358742.1	XM_358742.1			38085050	XM_358742.1	LOC384457		ILMN_1223845	000430609	S	130	CAGGACAAGCTGAACAATCTCGTCCTGTTTGACAAAGTCTTCCTTCCGGA										
Mus musculus	RefSeq	ILMN_252765	ILMN_252765	S100A14	NM_025393.1	NM_025393.1		66166	13384775	NM_025393.1	S100a14	NP_079669.1	ILMN_2779858	006450301	S	708	GGGGAAGGGCAGAAAGGAACTGGGTTATGGAAGTGATCCAAAGAGCAGGG	3	+	90614413-90614462	3qF1	Mus musculus S100 calcium binding protein A14 (S100a14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	S100a15; 1110013O05Rik	S100a15; 1110013O05Rik
Mus musculus	RefSeq	ILMN_221274	ILMN_221274	ANXA3	NM_013470.1	NM_013470.1		11745	7304886	NM_013470.1	Anxa3	NP_038498.1	ILMN_3135781	005090184	A	1198	GCCCTGATGGTGGACCGCCTCAAAATCTCTGCACACTGCTTTCATGCAGC	5	+	97274618-97274667	5qE3	Mus musculus annexin A3 (Anxa3), mRNA.			Stops, prevents or reduces the activity of the enzyme phospholipase A2 [goid 19834] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [evidence IEA]	Anx3	Anx3
Mus musculus	RefSeq	ILMN_221274	ILMN_221274	ANXA3	NM_013470.1	NM_013470.1		11745	7304886	NM_013470.1	Anxa3	NP_038498.1	ILMN_1241171	001580519	S	1272	GACAGAACCTGTCTGCCTGATAGGCATTGGCATCGTTCAGTGCAATGGCA	5	+	97274692-97274741	5qE3	Mus musculus annexin A3 (Anxa3), mRNA.			Stops, prevents or reduces the activity of the enzyme phospholipase A2 [goid 19834] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [evidence IEA]	Anx3	Anx3
Mus musculus	RefSeq	ILMN_259576	ILMN_259576	C630028N24RIK	NM_177351.2	NM_177351.2		235386	31340668	NM_177351.2	C630028N24Rik	NP_796325.1	ILMN_2964996	002570100	S	2348	CTGAAATGGTAAAACAGATCCATTCTCACAGGGCAGTGGTGGCGCACGCC	9	+	54745299-54745348	9qB	Mus musculus RIKEN cDNA C630028N24 gene (C630028N24Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211449	ILMN_211449	TBC1D24	NM_173186.3	NM_173186.3		224617	141802039	NM_173186.3	Tbc1d24	NP_775278.2	ILMN_1222184	007570255	S	4074	GGATGCTGAGTCATGATCACATCACAAGCAAAGTTCTTAGCTTTTCTCCC	17	-	24316001-24316050	17qA3.3	Mus musculus TBC1 domain family, member 24 (Tbc1d24), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	C530046L02Rik; mKIAA1171; 9630033P11	C530046L02Rik; mKIAA1171; 9630033P11
Mus musculus	RefSeq	ILMN_211449	ILMN_211449	TBC1D24	NM_173186.3	NM_173186.3		224617	141802039	NM_173186.3	Tbc1d24	NP_775278.2	ILMN_2616015	004810722	S	4205	TTTTTATTCTTATCACTGTTCTTATCTGATACTACTAAGTGTTCTCACTT	17	-	24315870-24315919	17qA3.3	Mus musculus TBC1 domain family, member 24 (Tbc1d24), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	C530046L02Rik; mKIAA1171; 9630033P11	C530046L02Rik; mKIAA1171; 9630033P11
Mus musculus	MEEBO	ILMN_213376	ILMN_213376	D3WSU161E	scl028036.1_230				39930524	NM_138593	D3Wsu161e		ILMN_2636456	005340685	S	706	TTGTCAGATTTTTTCAATGAACACCCTTACTTTTGAATTTACGCAAATGC										
Mus musculus	RefSeq	ILMN_198849	ILMN_318177	GM687	XR_032384.1	XR_032384.1		272465	149258379	XR_032384.1	Gm687		ILMN_2533140	001030370	S	1188	CACCCCCCTACGCACCCTGACACAGAGGAGGTCGTAGACTAAAAAGTAAT	8	+	13461350-13461399	8qA1.1	PREDICTED: Mus musculus gene model 687, (NCBI) (Gm687), misc RNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_218528	ILMN_218528	TAL2	NM_009317.3	NM_009317.3		21350	142369795	NM_009317.3	Tal2	NP_033343.1	ILMN_2696903	007320646	S	1021	TAAACCTTAGCTAAAATGAGCCCGAGCACACCCTTAGTTTGACACACTTG	4	+	53799634-53799683	4qB2	Mus musculus T-cell acute lymphocytic leukemia 2 (Tal2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The process by which the thalamus changes over time, from its initial formation to its mature state [goid 21794] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MGC130117	MGC130117
Mus musculus	RefSeq	ILMN_216152	ILMN_216152	PNPO	NM_134021.2	NM_134021.2		103711	125625355	NM_134021.2	Pnpo	NP_598782.1	ILMN_2855792	002000593	S	1917	ATGGCTGTTAGGGGGTTGTGTGTGCTCCCTCCCCCGGGCTTTAGTGTGAT	11	-	96799199-96799248	11qD	Mus musculus pyridoxine 5'-phosphate oxidase (Pnpo), mRNA.		The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds [goid 8615] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: pyridoxamine 5'-phosphate + H2O + O2 = pyridoxal 5'-phosphate + NH3 + H2O2 [goid 4733] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]	AI415282	AI415282
Mus musculus	RefSeq	ILMN_216152	ILMN_216152	PNPO	NM_134021.2	NM_134021.2		103711	125625355	NM_134021.2	Pnpo	NP_598782.1	ILMN_2713686	000270754	S	352	CGAGGCTGTTCAGTGTCCGGACATAGGAGAAGCCAATGCTATGTGTGTGG	11	-	96803736-96803785	11qD	Mus musculus pyridoxine 5'-phosphate oxidase (Pnpo), mRNA.		The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds [goid 8615] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: pyridoxamine 5'-phosphate + H2O + O2 = pyridoxal 5'-phosphate + NH3 + H2O2 [goid 4733] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]	AI415282	AI415282
Mus musculus	RefSeq	ILMN_201268	ILMN_201268	LOC385009	XM_357986.1	XM_357986.1			38090280	XM_357986.1	LOC385009		ILMN_1258439	005690477	S	23419	CCAGAAGAACCTCCTACAAGTACGTATCAACATAGCCCCACAGAGGCGCA										
Mus musculus	RefSeq	ILMN_200198	ILMN_200198	LOC385922	XM_358999.1	XM_358999.1			38080882	XM_358999.1	LOC385922		ILMN_2537922	006400445	S	434	CTTTAGGAGGAATCTGGCTTGGTGGCAAAGAGGACCAAACTGGACTCGGC										
Mus musculus	Riken	ILMN_204721	ILMN_204721	A730098N08RIK	ri|A730098N08|PX00154A23|AK043473|1850					AK043473	A730098N08Rik		ILMN_1223715	003180326	S	1403	TGCGGCTCTGGCATTGTACCCGGCCTCAGCAGTAGAAGTTCAGGCACTGA										
Mus musculus	RefSeq	ILMN_223546	ILMN_223546	PRAMEL6	NM_178249.2	NM_178249.2		347711	31342427	NM_178249.2	Pramel6	NP_839980.1	ILMN_1228899	005570538	S	1360	TCTTTTACTACACAAACCTGCTTGAAGTGTTTACATTCCTGTCATTATTA	2	+	87350842-87350891	2qD	Mus musculus preferentially expressed antigen in melanoma like 6 (Pramel6), mRNA.				C80453; C80515	C80453; C80515
Mus musculus	RefSeq	ILMN_198679	ILMN_234013	LOC623006	XR_004752.1	XR_004752.1		623006	94408301	XR_004752.1	LOC623006		ILMN_1246561	003290438	S	1073	GCGGAAGATGGGCCTCCAGAGCACCTGTTTATTCATGGAGGACACACTGC				XqF2	PREDICTED: Mus musculus similar to retinoblastoma-binding protein mRbAp46 (LOC623006), misc RNA.					
Mus musculus	Riken	ILMN_206305	ILMN_206305	MARK3	ri|D030065P19|PX00181I04|AK083683|1792					AK083683	Mark3		ILMN_2579127	004010050	S	8	ATCTTGAGTCTGTAAGGCTCCTGAGGTGCCGGGAGCGGCGGTGGCAGCCG							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223015	ILMN_223015	3010026O09RIK	NM_026543.2	NM_026543.2		68067	142350731	NM_026543.2	3010026O09Rik	NP_080819.1	ILMN_1247302	000620484	S	969	GGGACCCAGAAGGCTCCACCCTTGCAACTGCACAACCTCTTTACAACCGG	11	+	50013446-50013495	11qB1.3	Mus musculus RIKEN cDNA 3010026O09 gene (3010026O09Rik), mRNA.				2900016G09Rik; AI851514; RP23-319B15.8; AW475975	2900016G09Rik; AI851514; RP23-319B15.8; AW475975
Mus musculus	RefSeq	ILMN_184203	ILMN_184203	V1RC7	NM_053237.2	NM_053237.2		113864	110611160	NM_053237.2	V1rc7	NP_444467.2	ILMN_2973698	006370039	S	680	CATCCCCCGAGAAAAGGGCCACTCAGACCATCTTGCTCCTGGTAGTTTTT	6	+	57184112-57184161	6qB3	Mus musculus vomeronasal 1 receptor, C7 (V1rc7), mRNA.		The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]		
Mus musculus	RefSeq	ILMN_251643	ILMN_251643	OLFR744	NM_001011738.1	NM_001011738.1		257884	58801269	NM_001011738.1	Olfr744	NP_001011738.1	ILMN_3161447	004490538	S	658	GGATCTTATACTCTGGTCCTAGCAGCTGTATTGAAGGTCCCTTCAGCCTC	14	+	51238556-51238605	14qC1	Mus musculus olfactory receptor 744 (Olfr744), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR106-13P	MOR106-13P
Mus musculus	Riken	ILMN_206454	ILMN_206454	D130075I24RIK	ri|D130075I24|PX00186F17|AK084003|3949					AK084003	D130075I24Rik		ILMN_1251787	006060129	S	3108	TCCAGTTTAAACCAGGAGCCGGCTTAATCCTTCATAACCTTCCCACCCCC										
Mus musculus	Riken	ILMN_204020	ILMN_204020	A630085A08RIK	ri|A630085A08|PX00147I04|AK042357|1048					AK042357	A630085A08Rik		ILMN_1232056	006400091	S	499	GGAGACTGATGGGAAAACCTCGGAGAGAGATCAGCCTTAAAACAGAAGCG										
Mus musculus	RefSeq	ILMN_219130	ILMN_219130	ANKRD5	NM_175667.2	NM_175667.2		319196	31342281	NM_175667.2	Ankrd5	NP_783598.1	ILMN_1229153	002470379	S	2973	CCCCTGATTCTCTAAAACTAAGAGAGTATTATGGTCTTTGTTCCTGAGGC	2	+	136253390-136253439	2qF3	Mus musculus ankyrin repeat domain 5 (Ankrd5), mRNA.				AV276460	AV276460
Mus musculus	RefSeq	ILMN_190349	ILMN_241044	BLOC1S3	NM_177692.3	NM_177692.3		232946	55742806	NM_177692.3	Bloc1s3	NP_808360.2	ILMN_2469383	000450338	S	1139	GACATGACACCACAAATACAAATCTACCACTCACTGTGTCTCTTTCTGGA	7	-	20091798-20091847	7qA3	Mus musculus biogenesis of lysosome-related organelles complex-1, subunit 3 (Bloc1s3), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BC043666; Blos3; E230011O18; rp	BC043666; Blos3; E230011O18; rp
Mus musculus	RefSeq	ILMN_259170	ILMN_259170	OLFR506	NM_001011871.1	NM_001011871.1		258215	58801495	NM_001011871.1	Olfr506	NP_001011871.1	ILMN_2813771	000580500	S	313	GGCTCAGGTGCTTTCTTTGGAACAGTTGAGTGCTTTGTTCTAGCTGCCAT	7	+	115756135-115756184	7qE3	Mus musculus olfactory receptor 506 (Olfr506), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR204-23	MOR204-23
Mus musculus	RefSeq	ILMN_201514	ILMN_201514	PSMB7	NM_011187.1	NM_011187.1		19177	6755205	NM_011187.1	Psmb7	NP_035317.1	ILMN_2836147	003360376	S	881	GCATACCACCCCTACCCCAACCCCATTCTACCCCAACCAGAAAACATGCC	2	-	38443604-38443653	2qB	Mus musculus proteasome (prosome, macropain) subunit, beta type 7 (Psmb7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	MC14; AU020723	MC14; AU020723
Mus musculus	RefSeq	ILMN_201514	ILMN_201514	PSMB7	NM_011187.1	NM_011187.1		19177	6755205	NM_011187.1	Psmb7	NP_035317.1	ILMN_1233153	002360370	S	433	GGGGGGAGTAGATGTTACTGGACCTCATCTCTACAGCATCTATCCTCATG	2	-	38489403-38489452	2qB	Mus musculus proteasome (prosome, macropain) subunit, beta type 7 (Psmb7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	MC14; AU020723	MC14; AU020723
Mus musculus	RefSeq	ILMN_201514	ILMN_201514	PSMB7	NM_011187.1	NM_011187.1		19177	6755205	NM_011187.1	Psmb7	NP_035317.1	ILMN_1240550	003060537	S	600	GTGAGGCTATTGCAGCTGGCATCTTTAATGACTTGGGGTCTGGAAGCAAC	2	-	38446293-38446342	2qB	Mus musculus proteasome (prosome, macropain) subunit, beta type 7 (Psmb7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	MC14; AU020723	MC14; AU020723
Mus musculus	RefSeq	ILMN_201514	ILMN_201514	PSMB7	NM_011187.1	NM_011187.1		19177	6755205	NM_011187.1	Psmb7	NP_035317.1	ILMN_1221340	002810128	S	98	AAGGGGTTCAAGCTCCCGAAAGCTCGGAAAACTGGCACTACCATCGCGGG	2	-	38498890-38498939	2qB	Mus musculus proteasome (prosome, macropain) subunit, beta type 7 (Psmb7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	MC14; AU020723	MC14; AU020723
Mus musculus	Riken	ILMN_202989	ILMN_202989	6530404N23RIK	ri|6530404N23|PX00048J05|AK032661|3466					AK032661	6530404N23Rik		ILMN_1221966	005720465	S	3237	GGAGCCCAAGAAGGAGCCCTCACAGCCCATGTCGTCTGATTTATTGCCCG										
Mus musculus	RefSeq	ILMN_186412	ILMN_254303	1700095J03RIK	XM_921833.3	XM_921833.3		74293	149258008	XM_921833.3	1700095J03Rik	XP_926926.1	ILMN_1219297	003990132	S	1514	AGCCTAGTTAAGGGACAACACTGGTAGGAAGAATTGTTGGAAAGGCATGC				7qE3	PREDICTED: Mus musculus RIKEN cDNA 1700095J03 gene (1700095J03Rik), mRNA.					
Mus musculus	Riken	ILMN_203500	ILMN_203500	C430017P18RIK	ri|C430017P18|PX00078P09|AK049504|4155					AK049504	C430017P18Rik		ILMN_1241050	001940711	S	4065	GAGGATTCTGTCCCTGGCTTTTGGCCTTTGGACCTACTGTCGGGCAGCAC										
Mus musculus	Riken	ILMN_202543	ILMN_202543	2410157M17RIK	ri|2410157M17|ZX00082M05|AK010821|1307					AK010821	2410157M17Rik		ILMN_1218437	000840280	S	279	GGGAGCGAGAGTATGGAACCAGATCAGTGCGTCCCCAGGTTCTGAGAGCT										
Mus musculus	RefSeq	ILMN_219246	ILMN_219246	STARD5	NM_023377.4	NM_023377.4		170460	40254328	NM_023377.4	Stard5	NP_075866.2	ILMN_2720674	002100327	S	976	GCTGGTTGCTGTAAGACACCTTGTCCCTGTGTGGGTCTTAAAGAATCATC	7	+	90789389-90789438	7qD3	Mus musculus StAR-related lipid transfer (START) domain containing 5 (Stard5), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence ISA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]	2310058G22Rik; AI607880; D7Ertd152e	2310058G22Rik; AI607880; D7Ertd152e
Mus musculus	RefSeq	ILMN_219246	ILMN_219246	STARD5	NM_023377.4	NM_023377.4		170460	40254328	NM_023377.4	Stard5	NP_075866.2	ILMN_1227508	000270228	S	2356	CCCGGCCCCATACCTTCTCCTGTTAGATCAAATGTACCTTCTATTAAACC	7	+	90790769-90790818	7qD3	Mus musculus StAR-related lipid transfer (START) domain containing 5 (Stard5), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence ISA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]	2310058G22Rik; AI607880; D7Ertd152e	2310058G22Rik; AI607880; D7Ertd152e
Mus musculus	RefSeq	ILMN_200890	ILMN_200890	LOC381896	XM_355913.1	XM_355913.1			38086863	XM_355913.1	LOC381896		ILMN_2540362	005570086	S	8	GAATATATTCTTTTTGTGTGAATTTTCCAATTGTATTTCAGACGTTAAGA										
Mus musculus	RefSeq	ILMN_188245	ILMN_310330	LOC100047093	XM_001477372.1	XM_001477372.1		100047093	149254982	XM_001477372.1	LOC100047093	XP_001477422.1	ILMN_2451036	001410646	S	2591	ATTAGGAGGGTTTCTGCTGGCCCTGCAGCTTGCTTCCCTGCGGATTAGGC					PREDICTED: Mus musculus similar to Ubiquitin-conjugating enzyme UbcH2 (LOC100047093), mRNA.					
Mus musculus	RefSeq	ILMN_215189	ILMN_215189	FBXO48	NM_176982.2	NM_176982.2		319701	31342516	NM_176982.2	Fbxo48	NP_795956.1	ILMN_1241094	001740066	S	1721	CTTTGAAATCTGATAATGTCTTTCTTAGCCTTTTAAGTATTTAACATTTA	11	+	16854379-16854428	11qA2	Mus musculus F-box protein 48 (Fbxo48), mRNA.				RP23-295E4.4	RP23-295E4.4
Mus musculus	RefSeq	ILMN_213921	ILMN_213921	TCEAL6	NM_025355.2	NM_025355.2		66104	31981278	NM_025355.2	Tceal6	NP_079631.2	ILMN_2775324	003420598	S	1066	TATGTTCATGGTACATTGTAAAAATGAATAAACAAAAATTTGCAGAACCT				XqF1	Mus musculus transcription elongation factor A (SII)-like 6 (Tceal6), mRNA.			Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	MGC107171; RP23-460B8.1; 1500026B10Rik	MGC107171; RP23-460B8.1; 1500026B10Rik
Mus musculus	RefSeq	ILMN_213921	ILMN_213921	TCEAL6	NM_025355.2	NM_025355.2		66104	31981278	NM_025355.2	Tceal6	NP_079631.2	ILMN_2839027	004040088	S	872	CATCAATTCTGACCTCTCTGAGGAGAAAGAACACTGCTGGCCCTGCTTTT	X	-	130555243-130555292	XqF1	Mus musculus transcription elongation factor A (SII)-like 6 (Tceal6), mRNA.			Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	MGC107171; RP23-460B8.1; 1500026B10Rik	MGC107171; RP23-460B8.1; 1500026B10Rik
Mus musculus	RefSeq	ILMN_198751	ILMN_198751	LOC245515	XM_141931.3	XM_141931.3			38087229	XM_141931.3	LOC245515		ILMN_2532793	005310128	S	880	CCACGATGCCTCAAGGTCAATATCAGGAAAGAGGTTTTTGAAGGTGAGGG										
Mus musculus	Riken	ILMN_203408	ILMN_203408	6030413C11RIK	ri|6030413C11|PX00056K12|AK031359|981					AK031359	6030413C11Rik		ILMN_2557080	001440079	S	82	GCTCAGCGGCCTGCTTCTATTTATGTGGGGGATCCAACATGGCGGCTGCG										
Mus musculus	RefSeq	ILMN_193864	ILMN_209727	IKBKG	NM_178590.3	NM_178590.3		16151	142351396	NM_178590.3	Ikbkg	NP_848705.1	ILMN_2698097	006450577	S	711	AGCACAGCGTCCAGGTGGACCAGCTGCGTATGCAGAACCAGAGCGTGGAG	X	+	71679212-71679261	XqA7.3	Mus musculus inhibitor of kappaB kinase gamma (Ikbkg), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence IDA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NEMO; 1110037D23Rik; AI848108; IKK[g]; AI851264; AW124339	NEMO; 1110037D23Rik; AI848108; IKK[g]; AI851264; AW124339
Mus musculus	RefSeq	ILMN_209727	ILMN_209727	IKBKG	NM_178590.3	NM_178590.3		16151	142351396	NM_178590.3	Ikbkg	NP_848705.1	ILMN_2598585	002470670	S	4294	CTGACAACAGTTTGGTCCTCACAGTGACTGCTTCATTGGAGTGCCTCTCC	X	+	71695459-71695508	XqA7.3	Mus musculus inhibitor of kappaB kinase gamma (Ikbkg), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence IDA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NEMO; 1110037D23Rik; AI848108; IKK[g]; AI851264; AW124339	NEMO; 1110037D23Rik; AI848108; IKK[g]; AI851264; AW124339
Mus musculus	RefSeq	ILMN_193864	ILMN_209727	IKBKG	NM_178590.3	NM_178590.3		16151	142351396	NM_178590.3	Ikbkg	NP_848705.1	ILMN_2630423	006860687	S	1687	CTGCAGGCTCTCCTCCCAGGGCATGTGGCACTTGGGTCTATAACATGTGT	X	+	71685752-71685801	XqA7.3	Mus musculus inhibitor of kappaB kinase gamma (Ikbkg), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence IDA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NEMO; 1110037D23Rik; AI848108; IKK[g]; AI851264; AW124339	NEMO; 1110037D23Rik; AI848108; IKK[g]; AI851264; AW124339
Mus musculus	Riken	ILMN_205391	ILMN_205391	SLIT2	ri|E030015M03|PX00204D04|AK053145|3015					AK053145	Slit2		ILMN_2572200	004070692	S	2872	GCTGGGATAAAGCCAGGTTCCCTTTAAGAATCTCTCTCTACACCGTCCAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]		
Mus musculus	Riken	ILMN_205337	ILMN_205337	RASGRF2	ri|A630035O18|PX00145G12|AK041764|2938					AK041764	Rasgrf2		ILMN_1229592	004150048	S	2090	GGCATCCTGGAACAATGGGGCAAGTTCTACTCCCTGCCATTAGTGAGGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214035	ILMN_214035	ANKRD2	NM_020033.1	NM_020033.1		56642	9910129	NM_020033.1	Ankrd2	NP_064417.1	ILMN_2806065	006060201	S	960	GTGGCCGTGAGACACCTCAGCCTATACCAGCCCAGTAAATACCTACCCGG	19	+	42119460-42119497:42119498-42119509	19qC3	Mus musculus ankyrin repeat domain 2 (stretch responsive muscle) (Ankrd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]			Arpp; mArpp	Arpp; mArpp
Mus musculus	MEEBO	ILMN_216299	ILMN_216299	FGD5	scl0232237.7_170	NM_172731.1			27370073	NM_172731.1	Fgd5		ILMN_2741464	003450278	S	639	CGGCGCTGGAAGAAACTCTGGCTCGTCATCAAGGGCAAAGTACTCTACAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210382	ILMN_210382	TLR11	NM_205819.1	NM_205819.1		239081	45429991	NM_205819.1	Tlr11	NP_991388.1	ILMN_2795644	002490072	S	2660	GGCCTGGGACCACTCATCTCCTGCTGTTGTTTCTGGAGCCCCTTGATAGG	14	+	50982836-50982885	14qC1	Mus musculus toll-like receptor 11 (Tlr11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm287; MGC129352; MGC129353	Gm287; MGC129352; MGC129353
Mus musculus	RefSeq	ILMN_212237	ILMN_212237	ORAI2	NM_178751.3	NM_178751.3		269717	110815864	NM_178751.3	Orai2	NP_848866.2	ILMN_2624293	002070739	S	3628	CTACTTAAGACATTTCAAAGGCAGAACATGATTGGTGTCTTTTGGGAAAG	5	-	136623502-136623551	5qG2	Mus musculus ORAI calcium release-activated calcium modulator 2 (Orai2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A730041O15Rik; Orai2	A730041O15Rik; Orai2
Mus musculus	RefSeq	ILMN_231858	ILMN_231858	CYP2C67	NM_001024719.2	NM_001024719.2		545288	118131197	NM_001024719.2	Cyp2c67	NP_001019890.1	ILMN_3074610	001170600	I	1380	CAAGCTGAAACCTCTGGTTGATCCAAAGGACATCGACATGACCCCCAAAC	19	-	39683625-39683674	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 67 (Cyp2c67), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	C730004C24Rik; MGC118068	C730004C24Rik; MGC118068
Mus musculus	RefSeq	ILMN_231858	ILMN_231858	CYP2C67	NM_001024719.2	NM_001024719.2		545288	118131197	NM_001024719.2	Cyp2c67	NP_001019890.1	ILMN_3153624	005550026	A	267	AGCCTTCATTGACCATGGAGAAGAGTTCTCTGGAAGAGGAAGGTTTCCGT	19	-	39718108-39718157	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 67 (Cyp2c67), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	C730004C24Rik; MGC118068	C730004C24Rik; MGC118068
Mus musculus	RefSeq	ILMN_191108	ILMN_256730	ATRN	NM_009730.2	NM_009730.2		11990	87299634	NM_009730.2	Atrn	NP_033860.2	ILMN_1254383	003890184	S	6728	GACGACACTGACCTCTTGCACTTGTACATAACTATACTGTAGTGTCCAGA	2	+	130854053-130854102	2qF1	Mus musculus attractin (Atrn), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IPI]	mKIAA0548; Mgca; mahogany; AW558010; mg	mKIAA0548; Mgca; mahogany; AW558010; mg
Mus musculus	Riken	ILMN_206288	ILMN_206288	9530062M13RIK	ri|9530062M13|PX00113L11|AK079259|3387					AK079259	9530062M13Rik		ILMN_1245748	000730102	S	2980	CCATCTCTGTCTGTCCTACTGAGTTCATGTAACGTGGCGTATGGAGCGTC										
Mus musculus	RefSeq	ILMN_252670	ILMN_252670	ABHD14A	NM_145919.1	NM_145919.1		68644	22095336	NM_145919.1	Abhd14a	NP_666031.1	ILMN_2888454	006480215	S	904	TCGAGAGTCACTTCAGCAGCTCCGCCACCTGCCCAACCACTCCATGGTGA	9	-	106342642-106342691	9qF1	Mus musculus abhydrolase domain containing 14A (Abhd14a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	AW558221; 1110013B16Rik; Dorz1	AW558221; 1110013B16Rik; Dorz1
Mus musculus	Riken	ILMN_205737	ILMN_205737	PAFAH1B3	ri|A330034H16|PX00131O12|AK039375|680					AK039375	Pafah1b3		ILMN_1214726	006290102	S	523	CTGGTGAGAGCCTTGGAAGAGTGGCAAAGGAAAAGGGGCAGCGGTTGTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197016	ILMN_197016	LOC214575	XM_129603.2	XM_129603.2			38073519	XM_129603.2	LOC214575		ILMN_2526606	001690520	S	2812	GTCAGGGAGCCATAGACCAGCTCTCTTTCATTTTGTCCCCCCAGCACCAG										
Mus musculus	RefSeq	ILMN_218689	ILMN_233593	SIVA1	NM_013929.1	NM_013929.1		30954	7305492	NM_013929.1	Siva1	NP_038957.1	ILMN_2699003	006770132	S	578	AGACACTGTGCACCAGCTGTGCTATGTTTGAAGCCTGAGGTGGCCACAGA	12	+	113887239-113887248:113887249-113887288	12qF1	Mus musculus SIVA1, apoptosis-inducing factor (Siva1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IPI]; Interacting selectively with a CD27, a receptor found on the surface of T cells and some B cells and NK cells [goid 5175] [evidence IPI]; Combining with a virus component to initiate a change in cell activity [goid 1618] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CD27bp; Siva	CD27bp; Siva
Mus musculus	RefSeq	ILMN_257420	ILMN_257420	MDM4	NM_008575.2	NM_008575.2		17248	31543244	NM_008575.2	Mdm4	NP_032601.2	ILMN_2877527	001850593	S	2744	TATGTCCCTGCTGGACTGGGACCACTGGGGCTCCTCTAATTACTACTAAG	1	-	134818087-134818136	1qE4	Mus musculus transformed mouse 3T3 cell double minute 4 (Mdm4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mdmx; AA414968; AU021806; AU018793; AL023055; C85810; 4933417N07Rik	Mdmx; AA414968; AU021806; AU018793; AL023055; C85810; 4933417N07Rik
Mus musculus	RefSeq	ILMN_197814	ILMN_197814	LOC230253	XM_124269.2	XM_124269.2			38078429	XM_124269.2	LOC230253		ILMN_2529458	000540259	S	676	GAATTCCTGGGTGAATGGACCGCACCAGCTCCCACAGCGCAGGCCACTGA										
Mus musculus	RefSeq	ILMN_237012	ILMN_237012	EG331493	NM_001033541.1	NM_001033541.1		331493	85702048	NM_001033541.1	EG331493	NP_001028713.1	ILMN_2890915	006480477	S	1298	GTGCCAGCCTGGTGGCCCATCCCACAGTGTTTCAACTCTCTAGCTCTGAA	X	+	102912765-102912814	XqD	Mus musculus predicted gene, EG331493 (EG331493), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	B130007I08	B130007I08
Mus musculus	RefSeq	ILMN_241581	ILMN_241581	1110039B18RIK	NM_144525.2	NM_144525.2		68796	31559969	NM_144525.2	1110039B18Rik	NP_653108.2	ILMN_2790512	000870408	S	2536	CAGCCTGTTACCTCAAAACACCCAGAACAAGCACGCCTTCCCAGGAGGCC	5	+	31153822-31153871	5qB1	Mus musculus RIKEN cDNA 1110039B18 gene (1110039B18Rik), mRNA.				AI841294; 4921530J21Rik; AU018742; C76280; FLJ20254	AI841294; 4921530J21Rik; AU018742; C76280; FLJ20254
Mus musculus	RefSeq	ILMN_212101	ILMN_212101	CCBL2	NM_173763.3	NM_173763.3		229905	142351293	NM_173763.3	Ccbl2	NP_776124.1	ILMN_1256103	004280022	S	791	GCAAGTCATTGCTGACCTTTGCGTCAAGCACGACACTCTGTGCATCAGCG	3	+	142389166-142389215	3qH1	Mus musculus cysteine conjugate-beta lyase 2 (Ccbl2), mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the reaction: L-kynurenine + 2-oxoglutarate = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-glutamate [goid 16212] [evidence IEA]; Catalysis of the reaction: RS-CH2-CH(NH3+)COO- = RSH + NH3 + pyruvate [goid 47804] [evidence IEA]	KATIII; C430041M20; Kat3; BC037135	KATIII; C430041M20; Kat3; BC037135
Mus musculus	RefSeq	ILMN_212101	ILMN_212101	CCBL2	NM_173763.3	NM_173763.3		229905	142351293	NM_173763.3	Ccbl2	NP_776124.1	ILMN_1231939	006940133	S	1680	CCGTGTTGTACTTTCTCATGAGTGGAAACGGAAATCGCCGTTACTGCACC	3	+	142407308-142407357	3qH1	Mus musculus cysteine conjugate-beta lyase 2 (Ccbl2), mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the reaction: L-kynurenine + 2-oxoglutarate = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-glutamate [goid 16212] [evidence IEA]; Catalysis of the reaction: RS-CH2-CH(NH3+)COO- = RSH + NH3 + pyruvate [goid 47804] [evidence IEA]	KATIII; C430041M20; Kat3; BC037135	KATIII; C430041M20; Kat3; BC037135
Mus musculus	MEEBO	ILMN_220525	ILMN_220525	OLFR1408	scl0258759.1_230				22129318	NM_146764	Olfr1408		ILMN_2775965	003290619	S	780	GCCCAAATCAGAGAACAGTAAGGACCAAGACCAGCTGCTCTCAGTGACCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_218624	ILMN_218624	RABAC1	NM_010261.2	NM_010261.2		14470	117676377	NM_010261.2	Rabac1	NP_034391.1	ILMN_1244857	000610379	S	535	ATCAGTATGCCCTGGCTGGTGGCGTCTCTTTCCCCTTCTTCTGGCTGGCC	7	-	25755136-25755185	7qA3	Mus musculus Rab acceptor 1 (prenylated) (Rabac1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PRA1; prenylin; 2310040I06Rik; Gbpap1	PRA1; prenylin; 2310040I06Rik; Gbpap1
Mus musculus	RefSeq	ILMN_249555	ILMN_249555	OLFR104	NM_001011783.2	NM_001011783.2		257948	148223440	NM_001011783.2	Olfr104	NP_001011783.2	ILMN_3161571	002760008	S	391	CCACTGCACTACCCTGCCATTATGAACAGTCAGGTCTGCATCCAGGTGGC				17qB1	Mus musculus olfactory receptor 104 (Olfr104), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR250-5	MOR250-5
Mus musculus	Riken	ILMN_204942	ILMN_204942	D230045O07RIK	ri|D230045O07|PX00190F23|AK052099|2177					AK052099	D230045O07Rik		ILMN_1253308	001500291	S	1796	GCAGTACAGTCAGAGGTCATCATTGCACCTAGAGAGGAGACAGCCTATGA										
Mus musculus	Riken	ILMN_201713	ILMN_201713	RAD23A	ri|2310040P19|ZX00040A09|AK009733|492					AK009733	Rad23a		ILMN_2544003	004260753	S	425	TGCCCTCAGTGCCAACGAGGTGCCGACTGGTGACTACAATGATGATAATA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IGI]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197685	ILMN_197685	LOC239392	XM_139579.1	XM_139579.1			20903696	XM_139579.1	LOC239392		ILMN_1241580	007100403	S	104	CGGTGAAGAAATCTCATCGTTACAGGCCTGCGTCTGGTGCTCAGGACTTC										
Mus musculus	Riken	ILMN_206582	ILMN_206582	D830041F06RIK	ri|D830041F06|PX00200G09|AK086002|2274					AK086002	D830041F06Rik		ILMN_1254728	000150402	S	1730	GCCTGTGTAAGGGGCACATAAGCTCACACAGTCAGTCACACACGCACATG										
Mus musculus	RefSeq	ILMN_211721	ILMN_211721	SLC2A10	NM_130451.1	NM_130451.1		170441	18485497	NM_130451.1	Slc2a10	NP_569718.1	ILMN_2956726	002370739	S	2902	CTGACTGCCACGCAGTTGGGACTTCTACAGACTGGTTGCTAAGCACTGGC	2	+	165210667-165210716	2qH3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 10 (Slc2a10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence ISO]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence ISO]	Glut10; AA450473	Glut10; AA450473
Mus musculus	RefSeq	ILMN_221327	ILMN_221327	MRPL14	NM_026732.2	NM_026732.2		68463	31980860	NM_026732.2	Mrpl14	NP_081008.1	ILMN_2734045	007380725	S	344	CGCATGCCCGGCTCCCGAATGACCCCAAAGTTTGACTCCAACAACGTGGT	17	+	45835193-45835242	17qB3	Mus musculus mitochondrial ribosomal protein L14 (Mrpl14), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	1110006I11Rik; AI846816; MRP-L32; Rpml32	1110006I11Rik; AI846816; MRP-L32; Rpml32
Mus musculus	RefSeq	ILMN_244983	ILMN_244983	GSDMA3	NM_001007461.1	NM_001007461.1		450219	55925615	NM_001007461.1	Gsdma3	NP_001007462.1	ILMN_3161407	000150170	S	797	CCTTGCAGTGCCTTCATATCTCCTACCCAGATGATATCTGAAGAGCCAGA	11	+	98494271-98494310:98494628-98494637	11qD	Mus musculus gasdermin A3 (Gsdma3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body [goid 42633] [evidence IMP]; The regression phase of the hair cycle during which cell proliferation ceases, the hair follicle shortens, and an anchored club hair is produced [goid 42637] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; Process whereby a relatively unspecialized epidermal cell acquires the specialized features of a sebaceous gland cell [goid 1949] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rco2; Dfl; Fgn; Gsdm1l; Gsdma3; Bsk	Rco2; Dfl; Fgn; Gsdm1l; Gsdma3; Bsk
Mus musculus	RefSeq	ILMN_199058	ILMN_199058	LOC380651	XM_354558.1	XM_354558.1			38090671	XM_354558.1	LOC380651		ILMN_1223691	003870669	S	486	AGAGCACCCGTCTCAGAAGTCTCTCCAGATTGCAACGCTCTTGCAAGGTG										
Mus musculus	RefSeq	ILMN_222180	ILMN_222180	PAK3	NM_008778.2	NM_008778.2		18481	117606271	NM_008778.2	Pak3	NP_032804.2	ILMN_1216639	002060273	S	1591	GCCAAGCCTCTGTCTAGTCTCACTCCTCTGATTATCGCCGCAAAGGAAGC	X	+	140225796-140225845	XqF2	Mus musculus p21 (CDKN1A)-activated kinase 3 (Pak3), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mPAK-3; PAK-3; Stk4; Pak65beta; Pak65alpha	mPAK-3; PAK-3; Stk4; Pak65beta; Pak65alpha
Mus musculus	RefSeq	ILMN_214383	ILMN_214383	M6PRBP1	NM_025836.3	NM_025836.3		66905	146261991	NM_025836.3	M6prbp1	NP_080112.1	ILMN_1245528	003360445	S	2020	CCAAGAACCCAGCAACTGTGACAGGATAGACAGCTGGGATGTTGCAATTG				17qD	Mus musculus mannose-6-phosphate receptor binding protein 1 (M6prbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1300012C15Rik	1300012C15Rik
Mus musculus	RefSeq	ILMN_218329	ILMN_218329	GSTT4	NM_029472.1	NM_029472.1		75886	21313101	NM_029472.1	Gstt4	NP_083748.1	ILMN_1217133	006250594	S	739	GACTGGTGAAGTTACCAAACTGGGACTGTTCGACACTAGACCCTACGATC	10	-	75279989-75280038	10qC1	Mus musculus glutathione S-transferase, theta 4 (Gstt4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]	4930583C14Rik; AI507011	4930583C14Rik; AI507011
Mus musculus	RefSeq	ILMN_216901	ILMN_216901	ZFP60	NM_029531.2	NM_029531.2		22718	86476063	NM_029531.2	Zfp60	NP_083807.2	ILMN_3152594	007320280	A	3562	CTTGGAGATTTACCCACCTCTAGTCTGTGAGCCAGCGGTCAGGATGCTCC	7	+	28536407-28536456	7qA3	Mus musculus zinc finger protein 60 (Zfp60), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	6330516O17Rik; Mfg3; AI449354; AI426106; Mfg-3	6330516O17Rik; Mfg3; AI449354; AI426106; Mfg-3
Mus musculus	MEEBO	ILMN_221997	ILMN_221997	PRIM1	scl38302.14.1_13	NM_008921.1			6679458	NM_008921.1	Prim1		ILMN_1241140	000130044	S	1349	TAAATACAGTAGAATCATCAATGGGCCTCAATCCTTGAAGCAGAACTTTC						A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which catalyzes the synthesis of an RNA primer on the lagging strand of replicating DNA; the smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis [goid 5658] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of a short RNA polymer, usually 4-15 nucleotides long, using one strand of unwound DNA as a template; the RNA then serves as a primer from which DNA polymerases extend synthesis [goid 6269] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. Catalyzed by a DNA-directed RNA polymerase that forms a complex with alpha DNA polymerase [goid 3896] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185803	ILMN_185803	2310040M23RIK	scl13945.1.1_73						2310040M23Rik		ILMN_2430126	005720711	S	19	GAGTCGTCTTCTTGTGATGGTTGTATCTGCTGGATGAGAGAGACTGTTCT										
Mus musculus	RefSeq	ILMN_211323	ILMN_211323	GPNMB	NM_053110.3	NM_053110.3		93695	142371734	NM_053110.3	Gpnmb	NP_444340.2	ILMN_2614655	000010193	S	728	GACTGTCTTTCGAAGATACGGCCGGGCATACATTCCCATCTCGAAGGTGA	6	+	48997381-48997430	6qB2.3	Mus musculus glycoprotein (transmembrane) nmb (Gpnmb), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]	ipd; Dchil	ipd; Dchil
Mus musculus	RefSeq	ILMN_211323	ILMN_211323	GPNMB	NM_053110.3	NM_053110.3		93695	142371734	NM_053110.3	Gpnmb	NP_444340.2	ILMN_2648669	004670228	S	2204	CCTGAGCTCCTGACAAAATTATAATGGGCCCGGGCTTTGTGTATGGTGCG	6	+	49006694-49006743	6qB2.3	Mus musculus glycoprotein (transmembrane) nmb (Gpnmb), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]	ipd; Dchil	ipd; Dchil
Mus musculus	RefSeq	ILMN_211323	ILMN_211323	GPNMB	NM_053110.3	NM_053110.3		93695	142371734	NM_053110.3	Gpnmb	NP_444340.2	ILMN_1236420	004040292	S	3307	CTGCTGGTTCCAGGACAAGAATGAGCAAGGCTGGGCTTGGGATCACTTCC	6	+	49007797-49007846	6qB2.3	Mus musculus glycoprotein (transmembrane) nmb (Gpnmb), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]	ipd; Dchil	ipd; Dchil
Mus musculus	RefSeq	ILMN_212709	ILMN_212709	RASSF2	NM_175445.3	NM_175445.3		215653	40254305	NM_175445.3	Rassf2	NP_780654.1	ILMN_1226997	005960487	S	4172	CCCTTCCTTCAGACATAATTGACAGTGGTTGCCATTCCTTGGGGTACACC	2	-	131818971-131819020	2qF2	Mus musculus Ras association (RalGDS/AF-6) domain family member 2 (Rassf2), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI852669; 9030412M04Rik; AW495050; 3830431H01Rik	AI852669; 9030412M04Rik; AW495050; 3830431H01Rik
Mus musculus	RefSeq	ILMN_212709	ILMN_212709	RASSF2	NM_175445.3	NM_175445.3		215653	40254305	NM_175445.3	Rassf2	NP_780654.1	ILMN_2629423	001510754	S	411	TTCAGATCTCAGAAGTGGATATGCCAGTTGAAGGCCTCGAGACACACAGC	2	-	131831051-131831100	2qF2	Mus musculus Ras association (RalGDS/AF-6) domain family member 2 (Rassf2), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI852669; 9030412M04Rik; AW495050; 3830431H01Rik	AI852669; 9030412M04Rik; AW495050; 3830431H01Rik
Mus musculus	RefSeq	ILMN_212709	ILMN_212709	RASSF2	NM_175445.3	NM_175445.3		215653	40254305	NM_175445.3	Rassf2	NP_780654.1	ILMN_2629420	000770504	S	417	TCTCAGAAGTGGATATGCCAGTTGAAGGCCTCGAGACACACAGCCCAACA	2	-	131831045-131831094	2qF2	Mus musculus Ras association (RalGDS/AF-6) domain family member 2 (Rassf2), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI852669; 9030412M04Rik; AW495050; 3830431H01Rik	AI852669; 9030412M04Rik; AW495050; 3830431H01Rik
Mus musculus	RefSeq	ILMN_220361	ILMN_220361	PANX3	NM_172454.2	NM_172454.2		208098	86262154	NM_172454.2	Panx3	NP_766042.2	ILMN_2721052	006060754	S	2217	CCATCGATCCACTTCTATACATTCTCCATTCACTGTTTCCTCCTGGCATC	9	-	37467738-37467787	9qA4	Mus musculus pannexin 3 (Panx3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]			4833413G11Rik; 3230401P04	4833413G11Rik; 3230401P04
Mus musculus	MEEBO	ILMN_217765	ILMN_217765	BC066140	scl30716.14.1_7				51761939	XM_485999	BC066140		ILMN_2687272	002600671	S	2282	GGTCTTTGGTTAAATGGTCGGGTACAGATTCTCACTTGCTAGCTGGACAA										
Mus musculus	RefSeq	ILMN_220600	ILMN_220600	MYO18A	NM_011586.2	NM_011586.2		360013	118130118	NM_011586.2	Myo18a	NP_035716.1	ILMN_2724235	003450148	S	7159	TGGATCTGGGGGCCCCAAGGCAGTACCTGGTGCTGGACCTGTTTGCCATC	11	+	77679337-77679386	11qB5	Mus musculus myosin XVIIIa (Myo18a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MyoPDZ; MysPDZ	MyoPDZ; MysPDZ
Mus musculus	MEEBO	ILMN_222853	ILMN_222853	A330049M08RIK	scl23674.9_251				21704093	NM_145555	A330049M08Rik		ILMN_1220612	001110349	S	1506	CCACTAGCCAGCTCCTAATGGCCAGTCAGCGCTCTCCCCCTTTAACAAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_219160	ILMN_227304	9530068E07RIK	NM_153117.2	NM_153117.2		213673	141802961	NM_153117.2	9530068E07Rik	NP_694757.1	ILMN_2768859	002900326	S	357	AGGAGGAGGCTGACAGCAATGAGGACCCCAGCATGGAGGAGGAGGACCTC	11	+	52216728-52216777	11qB1.3	Mus musculus RIKEN cDNA 9530068E07 gene (9530068E07Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C85061; RP23-289H16.2; MGC28751	C85061; RP23-289H16.2; MGC28751
Mus musculus	RefSeq	ILMN_219160	ILMN_227304	9530068E07RIK	NM_153117.2	NM_153117.2		213673	141802961	NM_153117.2	9530068E07Rik	NP_694757.1	ILMN_1253452	006110689	S	2107	CCCCCAGCCACTGGGATTATTTGCCGTATTTCATGGTAGCCTGCCTTTTC	11	+	52221865-52221914	11qB1.3	Mus musculus RIKEN cDNA 9530068E07 gene (9530068E07Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C85061; RP23-289H16.2; MGC28751	C85061; RP23-289H16.2; MGC28751
Mus musculus	RefSeq	ILMN_211339	ILMN_211339	BACE2	NM_019517.2	NM_019517.2		56175	31542214	NM_019517.2	Bace2	NP_062390.2	ILMN_2831799	000870743	S	3270	TGTGTTCTCAAATGCTCACAGATATGTCCACCATGCTCTGGTTGAGTGTG	16	+	97543490-97543539	16qC4	Mus musculus beta-site APP-cleaving enzyme 2 (Bace2), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	ALP56; 1110059C24Rik; DRAP; AI850424; CEAP1; BAE2; CDA13; ASP21; AEPLC; ARP1	ALP56; 1110059C24Rik; DRAP; AI850424; CEAP1; BAE2; CDA13; ASP21; AEPLC; ARP1
Mus musculus	RefSeq	ILMN_185054	ILMN_185054	SAE1	NM_019748.2	NM_019748.2		56459	133892402	NM_019748.2	Sae1	NP_062722.1	ILMN_2423789	002630291	S	1794	GGAGTATGAGGGCAGCCTGTCTAGTTTGTAGATCCCCTTGGTTGCTGGAT	7	-	16912430-16912479	7qA2	Mus musculus SUMO1 activating enzyme subunit 1 (Sae1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]	2400010M20Rik; Uble1a; AW743391; AOS1; AL033372; HSPC140; Sua1; 2610044L12Rik; D7Ertd177e	2400010M20Rik; Uble1a; AW743391; AOS1; AL033372; HSPC140; Sua1; 2610044L12Rik; D7Ertd177e
Mus musculus	RefSeq	ILMN_185054	ILMN_185054	SAE1	NM_019748.2	NM_019748.2		56459	133892402	NM_019748.2	Sae1	NP_062722.1	ILMN_2513895	004480291	S	174	GGCATGAAAGGACTTGGAGCTGAAATTGCCAAGAATCTTATCCTGGCAGG	7	-	16963747-16963796	7qA2	Mus musculus SUMO1 activating enzyme subunit 1 (Sae1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]	2400010M20Rik; Uble1a; AW743391; AOS1; AL033372; HSPC140; Sua1; 2610044L12Rik; D7Ertd177e	2400010M20Rik; Uble1a; AW743391; AOS1; AL033372; HSPC140; Sua1; 2610044L12Rik; D7Ertd177e
Mus musculus	MEEBO	ILMN_222680	ILMN_222680	EIF4B	scl0075705.1_5	NM_145625.1			21704127	NM_145625.1	Eif4b		ILMN_2753323	006550133	S	663	TTCAGACCGGTATCGGGATGGGTATAGGGACGGATATCGGGACGGCCCAC							The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_222680	ILMN_222680	EIF4B	scl0075705.1_5	NM_145625.1			21704127	NM_145625.1	Eif4b		ILMN_1243394	000670092	S	3299	GGGCTTTTGCAGATACCCACAGTTGAATGGGTTTTTTTAAACCATTGTTG							The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187193	ILMN_187193	ZFP120	scl00104348.1_228	NM_181267.2			31341472	NM_181267.2	Zfp120		ILMN_2441968	004220131	S	16	GAAGCCATGGTTAGAGACAGTCAATATGATTTCGTGAACAAAGATGGGCA										
Mus musculus	MEEBO	ILMN_187089	ILMN_187089	ECHDC1	scl38095.1.344_184				31542450	NM_025855	Echdc1		ILMN_2659950	005900747	S	2395	AGCTCTTTAGCCACAAATACCAAAGTGTCCCCATCCCTTTTCCAGACTCA							The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_238565	ILMN_238565	SLC38A11	NM_177074.2	NM_177074.2		320106	114205380	NM_177074.2	Slc38a11	NP_796048.2	ILMN_2958981	004590482	S	1479	CGGAACCTCGGCATCTTTCAGCGAGCTGGCTGCTTTAAACAACATGCACC	2	-	65154767-65154816	2qC1.3	Mus musculus solute carrier family 38, member 11 (Slc38a11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191634	ILMN_238565	SLC38A11	NM_177074.2	NM_177074.2		320106	114205380	NM_177074.2	Slc38a11	NP_796048.2	ILMN_2480800	002260161	S	1004	GACCTTTGGGAGGTTTTGTTATGGTATCACTGTCATTTTGACTTACCCGA	2	-	65168359-65168408	2qC1.3	Mus musculus solute carrier family 38, member 11 (Slc38a11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218355	ILMN_317375	LOC100046643	XM_001476559.1	XM_001476559.1		100046643	149250969	XM_001476559.1	LOC100046643	XP_001476609.1	ILMN_1230525	001230224	S	49	TCTGCGGGCTAAGGAGCGGCTGCGAGCGGCGTGCATGTGCCGGGAGGGCC					PREDICTED: Mus musculus similar to sprouty 1, transcript variant 1 (LOC100046643), mRNA.					
Mus musculus	RefSeq	ILMN_218355	ILMN_317375	LOC100046643	XM_001476559.1	XM_001476559.1		100046643	149250969	XM_001476559.1	LOC100046643	XP_001476609.1	ILMN_2735007	004260661	S	2323	TTCAAGAAAAGCAAGGTGACTCGAAGAAAGTATATAAAAAACATCTATGT					PREDICTED: Mus musculus similar to sprouty 1, transcript variant 1 (LOC100046643), mRNA.					
Mus musculus	RefSeq	ILMN_218446	ILMN_218446	SPRR2F	NM_011472.2	NM_011472.2		20760	49169822	NM_011472.2	Sprr2f	NP_035602.1	ILMN_2695944	002760669	S	516	CCATTGTTCAGTATGACATTTTTCAAATCTCTCTGTCACTTGAGCAGGGT	3	+	92170271-92170320	3qF1	Mus musculus small proline-rich protein 2F (Sprr2f), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211419	ILMN_211419	SPC24	NM_026282.2	NM_026282.2		67629	31560186	NM_026282.2	Spc24	NP_080558.1	ILMN_2948272	005340398	S	1177	CAAAAATGTGTGCAGTTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCA	9	-	21505966-21506015	9qA3	Mus musculus SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) (Spc24), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		Spbc24; 2410030K01Rik; AV109292	Spbc24; 2410030K01Rik; AV109292
Mus musculus	Riken	ILMN_205141	ILMN_205141	NECL1-PENDING	ri|9630060A02|PX00117H11|AK036352|2748					AK036352	Necl1-pending		ILMN_1244738	003780189	S	2348	CCAAGAGACCCCTCTTAGATACCAGACCACCTGGCTATTACTCTGCAGGG										
Mus musculus	RefSeq	ILMN_214165	ILMN_214165	DSPP	NM_010080.2	NM_010080.2		666279	111120321	NM_010080.2	Dspp	NP_034210.2	ILMN_1234325	002970279	S	3994	GATAATCTACTCTATTCTCATTTTAGGCTTATTTTACCCAGAGTTTCAGA	5	+	104608709-104608758	5qE5	Mus musculus dentin sialophosphoprotein (Dspp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Dsp; MGC124498; Dmp2; Dpp	Dsp; MGC124498; Dmp2; Dpp
Mus musculus	RefSeq	ILMN_218584	ILMN_218584	SERPINB9B	NM_011452.2	NM_011452.2		20706	142385898	NM_011452.2	Serpinb9b	NP_035582.1	ILMN_2697632	000830678	S	1843	TTTTAAGAGTGCTATGGGTTTTACTAATGGTTGAATAATTTTGACTATGT	13	+	33132341-33132390	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 9b (Serpinb9b), mRNA.		The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IDA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ovalbumin; 1600019A21Rik; R86; RP23-391I11.4; Spi10; SPI-CI	ovalbumin; 1600019A21Rik; R86; RP23-391I11.4; Spi10; SPI-CI
Mus musculus	Riken	ILMN_206962	ILMN_206962	E130001F20RIK	ri|E130001F20|PX00207L13|AK087371|2511					AK087371	E130001F20Rik		ILMN_2584000	002810653	S	1840	ATCCTGTGTGTGGGAGGGAGGGGGGTCACACAGACACTGGCATTCAGACT										
Mus musculus	Riken	ILMN_206830	ILMN_206830	PCSK5	ri|D930013J09|PX00201C14|AK086210|3337					AK086210	Pcsk5		ILMN_1248532	003140450	S	3005	ATGCACATAGCCTTGTGGTTATACGCATGCAGATAAAGAATGTCCAAGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract [goid 30323] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [evidence IDA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IDA]; The chemical reactions and pathways resulting in the formation of cytokines, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 42089] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; Any process involved in the assembly, maturation, egress, and release of progeny virions [goid 19067] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200933	ILMN_200933	LOC384655	XM_357768.1	XM_357768.1			38087163	XM_357768.1	LOC384655		ILMN_1216737	004010300	S	213	GTCAAAGGGAATGGGCAGGCAGAGATACTGCTGGGGCACTGGGAAGAAAG										
Mus musculus	Riken	ILMN_205374	ILMN_205374	D130043L23RIK	ri|D130043L23|PX00183F10|AK051382|2120					AK051382	D130043L23Rik		ILMN_2572071	005550241	S	1792	TTCCCTCTGTTTCTTCTATGATCAGTCAGTCAAGGACTTCATTGCTTAGG										
Mus musculus	MEEBO	ILMN_221232	ILMN_221232	PLA2G4B	scl20404.24.1_22	XM_355378.1			38075624	XM_355378.1	Pla2g4b		ILMN_1220325	000510609	S	3901	CCCTGGCTGGGCTCCTGCCTGGGTCACTCTTGGTCTTTAACTCCTTTCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a glycerophospholipid [goid 4620] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186730	ILMN_245487	2310009B15RIK	NM_001081226.1	NM_001081226.1		69549	124487010	NM_001081226.1	2310009B15Rik	NP_001074695.1	ILMN_1229684	004010164	S	297	ACCCAGCTACCGGCTATGTGGTTCTCACAAGGCTGGCCCACTTGCAGAGA	1	-	140750177-140750226	1qF	Mus musculus RIKEN cDNA 2310009B15 gene (2310009B15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_246414	ILMN_312151	LOC100047018	XM_001476591.1	XM_001476591.1		100047018	149257942	XM_001476591.1	LOC100047018	XP_001476641.1	ILMN_3161954	003190370	S	923	AGCTGAAAGTGGGCTTCCGGAAGGTTTTTAGCCTGAGTGAGTTTGTGTCT					PREDICTED: Mus musculus similar to olfactory receptor Olfr688 (LOC100047018), mRNA.					
Mus musculus	RefSeq	ILMN_214657	ILMN_214657	4833442J19RIK	NM_177101.4	NM_177101.4		320204	133892656	NM_177101.4	4833442J19Rik	NP_796075.2	ILMN_3160574	000050136	S	930	GAGCCAACTCAGCAAGAGAACAATGGACTGACCACAAGTGCTGTATGGGA	6	+	149099145-149099194	6qG3	Mus musculus RIKEN cDNA 4833442J19 gene (4833442J19Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IEA]	Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IEA]	AI256744	AI256744
Mus musculus	RefSeq	ILMN_216216	ILMN_261843	ULBP1	NM_029975.1	NM_029975.1		77777	58037504	NM_029975.1	Ulbp1	NP_084251.1	ILMN_2668590	002480711	S	3474	GAGAAACGAAGTCAGACTCCAAGCATTAGTCTCTGCTATTATAAGTCTCA					Mus musculus UL16 binding protein 1 (Ulbp1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of natural killer cell activation [goid 32816] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of an immune response to tumor cell [goid 2839] [evidence IDA]; Any process that stimulates, induces or increases the rate of macrophage activation [goid 43032] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; The process of causing a cell to become susceptible to natural killer cell mediated cytotoxicity [goid 42271] [evidence IDA]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IPI]	MULT1; A430108B07Rik	MULT1; A430108B07Rik
Mus musculus	RefSeq	ILMN_241290	ILMN_241290	HIATL1	NM_133680.2	NM_133680.2		66631	31542005	NM_133680.2	Hiatl1	NP_598441.2	ILMN_2796878	007650132	S	2869	GGAATGCGCACATCAAATTCCTTTCTAAAATATGAGGGTTAGTGGAGCTC	13	-	65080336-65080385	13qB3	Mus musculus hippocampus abundant transcript-like 1 (Hiatl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]	AW539692; AU045608; 5730414C17Rik	AW539692; AU045608; 5730414C17Rik
Mus musculus	RefSeq	ILMN_245122	ILMN_245122	OLFR1182	NM_001011535.1	NM_001011535.1		258167	58372147	NM_001011535.1	Olfr1182	NP_001011535.1	ILMN_3161457	007150176	S	486	CTGTTTGCCCTTCTGTGGACCCAATGAAATAGACCACTACTTCTGTGATG	2	-	88286558-88286607	2qD	Mus musculus olfactory receptor 1182 (Olfr1182), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR225-7P	MOR225-7P
Mus musculus	Riken	ILMN_204371	ILMN_204371	PDK4	ri|9330198J08|PX00107E18|AK034481|4106					AK034481	Pdk4		ILMN_1216259	000630291	S	3702	CAACTGCTGGTGTGGGTATGGAGAGGGGGAAGCTTATGAAGAGAGAGTGA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The posttranslational phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine) [goid 18106] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate [goid 6086] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine [goid 4673] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate dehydrogenase (acetyl-transferring) = ADP + pyruvate dehydrogenase (acetyl-transferring) phosphate [goid 4740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine/tyrosine = ADP + protein serine/threonine/tyrosine phosphate [goid 4712] [evidence TAS]		
Mus musculus	RefSeq	ILMN_196722	ILMN_196722	HIST1H4F	NM_175655.1	NM_175655.1		319157	30061354	NM_175655.1	Hist1h4f	NP_783586.1	ILMN_1222313	006860347	S	1	ATGTCTGGTCGTGGTAAGGGAGGAAAAGGCCTGGGCAAAGGCGGCGCTAA	13	-	23643462-23643511	13qA3.1	Mus musculus histone cluster 1, H4f (Hist1h4f), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196722	ILMN_196722	HIST1H4F	NM_175655.1	NM_175655.1		319157	30061354	NM_175655.1	Hist1h4f	NP_783586.1	ILMN_2525565	006370138	S	21	AGGAAAAGGCCTGGGCAAAGGCGGCGCTAAGCGCCACCGTAAGGTTCTTC	13	-	23643442-23643491	13qA3.1	Mus musculus histone cluster 1, H4f (Hist1h4f), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196739	ILMN_196722	HIST1H4F	NM_175655.1	NM_175655.1		319157	30061354	NM_175655.1	Hist1h4f	NP_783586.1	ILMN_1230265	006380377	S	16	AAGGGAGGAAAAGGCCTGGGCAAAGGCGGCGCTAAGCGCCACCGTAAGGT	13	-	23643447-23643496	13qA3.1	Mus musculus histone cluster 1, H4f (Hist1h4f), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214683	ILMN_214683	TAF15	NM_027427.1	NM_027427.1		70439	30794411	NM_027427.1	Taf15	NP_081703.1	ILMN_2650732	003830364	S	1783	TCCTTTGTCTCTGACATGATCCGTGGGGAATTGTCAGAGTGTGCCTGCTG	11	+	83322669-83322718	11qC	Mus musculus TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf15), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		68kDa; TAFII68; Taf2n; 2610111C21Rik	68kDa; TAFII68; Taf2n; 2610111C21Rik
Mus musculus	MEEBO	ILMN_212486	ILMN_212486	AW540478	scl0003074.1_56	XM_194070.2			38075783	XM_194070.2	AW540478		ILMN_2626980	004260674	S	3753	CCTCCTGCAACAGAATTTGTATGCCCGGCCTGTGCAACTGAGGATACAGT										
Mus musculus	RefSeq	ILMN_216805	ILMN_216805	UBLCP1	NM_024475.3	NM_024475.3		79560	56711344	NM_024475.3	Ublcp1	NP_077795.2	ILMN_2852904	000670463	S	1747	AAAGGCACCATCACCAACTCGACTCTCAGAAGCGTGGATAGCATCTCTGC	11	-	44298232-44298281	11qB1.1	Mus musculus ubiquitin-like domain containing CTD phosphatase 1 (Ublcp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]	MGC7513; BC002236; 4930527B16Rik; 8430435I17Rik; MGC117826	MGC7513; BC002236; 4930527B16Rik; 8430435I17Rik; MGC117826
Mus musculus	RefSeq	ILMN_219111	ILMN_219111	DPPA3	NM_139218.1	NM_139218.1		73708	21218415	NM_139218.1	Dppa3	NP_631964.1	ILMN_1225176	007320689	S	349	CCCAAGAGAAGGGTCCGCACTTTGTTGTCGGTGCTGAAAGACCCTATAGC	6	+	122578756-122578805	6qF1	Mus musculus developmental pluripotency-associated 3 (Dppa3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IDA]; The pronucleus originating from the spermatozoa that was involved in fertilization [goid 1940] [evidence IDA]	The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]		2410075G02Rik; MGC130308; PCG7; MGC117617; MGC130309; Stella; PGC7	2410075G02Rik; MGC130308; PCG7; MGC117617; MGC130309; Stella; PGC7
Mus musculus	RefSeq	ILMN_216338	ILMN_216338	OLFR1447	NM_146703.1	NM_146703.1		258698	22129434	NM_146703.1	Olfr1447	NP_666914.1	ILMN_2669916	006580433	S	440	CTGGCTCTTATGTCATCAGTTTTACAAATTCCTCCATCCATATTGCAGAC	19	-	12975779-12975828	19qA	Mus musculus olfactory receptor 1447 (Olfr1447), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-3	MOR202-3
Mus musculus	Riken	ILMN_201808	ILMN_201808	TSN	ri|2600015M20|ZX00060F21|AK011220|503					AK011220	Tsn		ILMN_2544757	004810170	S	241	GGCCTGGTCCTGCTCGGTCTCTCGTTTTCAGGCCCGATGGGTTTAGGTTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	Riken	ILMN_206006	ILMN_206006	B130038N13RIK	ri|B130038N13|PX00158A17|AK045130|1975					AK045130	B130038N13Rik		ILMN_2576840	002340561	S	1876	CCCTTTCTCCCATTCCTAGTAGGGTGAGTCTAGAGGGGGTGAATTCTTTC										
Mus musculus	RefSeq	ILMN_219099	ILMN_238111	9130221D24RIK	NM_029953.1	NM_029953.1		77669	58037496	NM_029953.1	9130221D24Rik	NP_084229.1	ILMN_2704299	001770632	S	517	CTACTGTCCTTGCTGGAAGAGGCCACAACAGACGTGGAACCGGCCATGCA	3	-	132839342-132839391	3qG3	Mus musculus RIKEN cDNA 9130221D24 gene (9130221D24Rik), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	MGC54810	MGC54810
Mus musculus	RefSeq	ILMN_213460	ILMN_213460	MRAP	NM_029844.3	NM_029844.3		77037	146149289	NM_029844.3	Mrap	NP_084120.1	ILMN_1234241	005870487	S	764	CCAACCCGGGCAGCTACGTCTTTTTTAGGGCCGTTTACAATGGCCTTGAA				16qC3.3	Mus musculus melanocortin 2 receptor accessory protein (Mrap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Falp; ORF61; 1110025G12Rik	Falp; ORF61; 1110025G12Rik
Mus musculus	RefSeq	ILMN_189052	ILMN_245243	LRRC14	NM_145471.2	NM_145471.2		223664	118130136	NM_145471.2	Lrrc14	NP_663446.1	ILMN_2626606	003450601	S	248	CGTTATGAATCTCGTGAATTTAAGACATGGTTTCTCAGTGAAGAGGAGGT	15	+	76541882-76541931	15qD3	Mus musculus leucine rich repeat containing 14 (Lrrc14), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E130306I01Rik; mKIAA0014	E130306I01Rik; mKIAA0014
Mus musculus	RefSeq	ILMN_189052	ILMN_245243	LRRC14	NM_145471.2	NM_145471.2		223664	118130136	NM_145471.2	Lrrc14	NP_663446.1	ILMN_2758168	000650403	S	2184	GGTGTGGATAAGGTACAAACGTGTAGTATCTGGAATGTGAATTTATGGGC	15	+	76545428-76545477	15qD3	Mus musculus leucine rich repeat containing 14 (Lrrc14), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E130306I01Rik; mKIAA0014	E130306I01Rik; mKIAA0014
Mus musculus	RefSeq	ILMN_195673	ILMN_195673	TRPV6	NM_022413.2	NM_022413.2		64177	28376638	NM_022413.2	Trpv6	NP_071858.2	ILMN_3001186	002690026	S	2679	CCCAGGTCTAATAAGTGGGAGGGCACAGAACTCTTCCCAGGGTGCTCCAG	6	-	41550355-41550404	6qB2.1	Mus musculus transient receptor potential cation channel, subfamily V, member 6 (Trpv6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]	CaT1; CAT; Cac; Otrpc3; Ecac2	CaT1; CAT; Cac; Otrpc3; Ecac2
Mus musculus	RefSeq	ILMN_223366	ILMN_223366	FOXO6	NM_194060.1	NM_194060.1		329934	34610226	NM_194060.1	Foxo6	NP_918949.1	ILMN_2763092	002470328	S	2349	TCTCCCATATTTATAAGTGTCCGGTCGGGGCGGGCGGTGGGCGCGGCGTC	4	-	119939812-119939861	4qD2.2	Mus musculus forkhead box O6 (Foxo6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223366	ILMN_223366	FOXO6	NM_194060.1	NM_194060.1		329934	34610226	NM_194060.1	Foxo6	NP_918949.1	ILMN_3150922	000160278	A	2018	CTGAATCTTCAGTTCCTATTGCTGGGCCCTTTGTGAGGCCTAAGCCACCC	4	-	119940143-119940192	4qD2.2	Mus musculus forkhead box O6 (Foxo6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223366	ILMN_223366	FOXO6	NM_194060.1	NM_194060.1		329934	34610226	NM_194060.1	Foxo6	NP_918949.1	ILMN_3072147	005910288	I	1109	TGCCCATGCAGACCATCCAGGAGAACAAGCAGGCCAGCTTCGTGCAGGCC	4	-	119941052-119941101	4qD2.2	Mus musculus forkhead box O6 (Foxo6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191511	ILMN_245497	9130230N09RIK	XM_986326.1	XM_986326.1		77671	94389915	XM_986326.1	9130230N09Rik	XP_991420.1	ILMN_2479708	002470196	S	355	CAGCCAGCTCGACCAAGACCACGAAGTCTTACTTACAGCCGCAGAAAGAA	11	-	22760854-22760903	11qA3.2	PREDICTED: Mus musculus RIKEN cDNA 9130230N09 gene (9130230N09Rik), mRNA.					
Mus musculus	MEEBO	ILMN_192588	ILMN_192588	MMP16	scl0002621.1_925				34785575	BC057926	Mmp16		ILMN_1217071	001940598	S	9	GTCAGGTGGGAGATCTGGAACACATGCAGGATGCTAGACTGTTGGGACAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190828	ILMN_250995	CLIP1	NM_019765.4	NM_019765.4		56430	146135078	NM_019765.4	Clip1	NP_062739.2	ILMN_1238497	001940767	S	4251	AGCGGCCATACTGTGAGATCTGTGAGATGTTTGGGCACTGGGCAACCAAC				5qF	Mus musculus CAP-GLY domain containing linker protein 1 (Clip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence ISO]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with the plus end of a microtubule [goid 51010] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	CYLN1; 1110007I12Rik; Rsn; mKIAA4046; 4631429H07Rik; KIAA4046; C81039; AV017631; CLIP-170; CLIP170; Clip50	CYLN1; 1110007I12Rik; Rsn; mKIAA4046; 4631429H07Rik; KIAA4046; C81039; AV017631; CLIP-170; CLIP170; Clip50
Mus musculus	RefSeq	ILMN_220816	ILMN_314103	WDR25	XM_001474974.1	XM_001474974.1		212198	149263513	XM_001474974.1	Wdr25	XP_001475024.1	ILMN_2727299	002360139	S	2262	TGGGTGGTCTGTGGTGGGCAAAGCTATGCATCTGTCCTGAAGGAGTGCGA	12	+	110266298-110266347	12qF1	PREDICTED: Mus musculus WD repeat domain 25 (Wdr25), mRNA.					
Mus musculus	RefSeq	ILMN_219866	ILMN_219866	SV2B	NM_153579.3	NM_153579.3		64176	40538847	NM_153579.3	Sv2b	NP_705807.2	ILMN_2714589	005260050	S	4805	GCTTGTTTGGGAGCCGATACTTTCAGCAGTCTCAACTGTGTTGTGGGATC	7	-	82259833-82259882	7qD2	Mus musculus synaptic vesicle glycoprotein 2 b (Sv2b), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	mKIAA0735; A830038F04Rik; MGC38746; AI850768	mKIAA0735; A830038F04Rik; MGC38746; AI850768
Mus musculus	MEEBO	ILMN_193394	ILMN_193394	AI661311	scl0106633.27_163				38083169	XM_359298	AI661311		ILMN_2496745	005260221	S	4	CCCTGGGGTTTATGGTTTGATGTCAGAACCAGCCAAGCAGCACAATGGCC										
Mus musculus	RefSeq	ILMN_185595	ILMN_228271	1700011I03RIK	XM_980728.1	XM_980728.1		75444	94404892	XM_980728.1	1700011I03Rik	XP_985822.1	ILMN_2428351	006370717	S	944	GCGCTCCCACCACCTCTGATGGGGAGTGGAATGGTTTCCCATGTGACAAT				18qD3	PREDICTED: Mus musculus RIKEN cDNA 1700011I03 gene, transcript variant 4 (1700011I03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_229405	ILMN_229405	SF3B5	NM_175102.3	NM_175102.3		66125	85540444	NM_175102.3	Sf3b5	NP_780311.2	ILMN_2975956	004250164	S	523	GCGTACCTGTGGAGGATTCGGAACAAGTCATGGAGAGACTGTCCGGGTCC	10	+	12728782-12728831	10qA1	Mus musculus splicing factor 3b, subunit 5 (Sf3b5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		Sf3b10; 1110005L13Rik; AU043053; 10kDa	Sf3b10; 1110005L13Rik; AU043053; 10kDa
Mus musculus	RefSeq	ILMN_212018	ILMN_212018	AMHR2	NM_144547.1	NM_144547.1		110542	21362358	NM_144547.1	Amhr2	NP_653130.1	ILMN_2994042	005090168	S	1563	CCTGGCTTACCCTCACGGGGCGTCCTCTTTCCCAGAGAGTCCACAGGGCT	15	+	102284739-102284788	15qF3	Mus musculus anti-Mullerian hormone type 2 receptor (Amhr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence TAS]; Combining with transforming growth factor beta to initiate a change in cell activity; upon ligand binding, catalyzes the phosphorylation of a type I activin receptor [goid 5026] [evidence ISO]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Misrii; MISIIR; MGC141312	Misrii; MISIIR; MGC141312
Mus musculus	RefSeq	ILMN_212018	ILMN_212018	AMHR2	NM_144547.1	NM_144547.1		110542	21362358	NM_144547.1	Amhr2	NP_653130.1	ILMN_2621799	003310739	S	483	GCCCGTCTGGATGGCACTGCTGCTCCTGGGAATGTTTCTCGTGTTGTTGC	15	+	102277143-102277192	15qF3	Mus musculus anti-Mullerian hormone type 2 receptor (Amhr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence TAS]; Combining with transforming growth factor beta to initiate a change in cell activity; upon ligand binding, catalyzes the phosphorylation of a type I activin receptor [goid 5026] [evidence ISO]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Misrii; MISIIR; MGC141312	Misrii; MISIIR; MGC141312
Mus musculus	RefSeq	ILMN_212018	ILMN_212018	AMHR2	NM_144547.1	NM_144547.1		110542	21362358	NM_144547.1	Amhr2	NP_653130.1	ILMN_2684178	006400279	S	1713	GAGTCCCGATCCTGTAGGCGACACTGTTCAGGTGTATGTAAATGAGTAGC	15	+	102284889-102284937:102284938-102284938	15qF3	Mus musculus anti-Mullerian hormone type 2 receptor (Amhr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence TAS]; Combining with transforming growth factor beta to initiate a change in cell activity; upon ligand binding, catalyzes the phosphorylation of a type I activin receptor [goid 5026] [evidence ISO]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Misrii; MISIIR; MGC141312	Misrii; MISIIR; MGC141312
Mus musculus	RefSeq	ILMN_222608	ILMN_238180	1700008P02RIK	XM_977944.2	XM_977944.2		69347	149250559	XM_977944.2	1700008P02Rik	XP_983038.1	ILMN_1216400	005290433	S	700	GGAGATCATTACAAATAGTCTACCTTTGAGTAGCCTTTTGTTGTTCTGGT				3qA1	PREDICTED: Mus musculus RIKEN cDNA 1700008P02 gene (1700008P02Rik), mRNA.					
Mus musculus	MEEBO	ILMN_194770	ILMN_194770	2010001P20RIK	scl42632.2.1_215						2010001P20Rik		ILMN_2509445	007100376	S	2	CGGTCTTCAGGGCTACCTAGGACTCAGCTGTGGCATTTGGATCTTCAGTG										
Mus musculus	RefSeq	ILMN_191320	ILMN_257106	RNMT	NM_026440.3	NM_026440.3		67897	142363427	NM_026440.3	Rnmt	NP_080716.1	ILMN_2759335	005560408	S	3681	CAGATGGGCTGTTCAGATACGTCTAGGCCTGTCACACAGTGTATGCTCAG	18	+	68483213-68483262	18qE2	Mus musculus RNA (guanine-7-) methyltransferase (Rnmt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA [goid 5845] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript [goid 6370] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the reaction: S-adenosyl-L-methionine + G(5')pppR-RNA = S-adenosyl-L-homocysteine + m7G(5')pppR-RNA; m7G(5')pppR-RNA is mRNA containing an N7-methylguanine cap; R may be guanosine or adenosine [goid 4482] [evidence ISO]	2610002P10Rik; AI848273; mKIAA0398	2610002P10Rik; AI848273; mKIAA0398
Mus musculus	RefSeq	ILMN_220329	ILMN_220329	HSD17B14	NM_025330.2	NM_025330.2		66065	61098115	NM_025330.2	Hsd17b14	NP_079606.2	ILMN_2720652	006660129	S	570	ACCGGGGGTGCAGAACTGGGGTATGGACGCAAGGCTAGTAAAAGCAGCCT	7	+	52822113-52822162	7qB4	Mus musculus hydroxysteroid (17-beta) dehydrogenase 14 (Hsd17b14), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610039E24Rik; Dhrs10; retSDR3	0610039E24Rik; Dhrs10; retSDR3
Mus musculus	RefSeq	ILMN_209115	ILMN_209115	GBE1	NM_028803.3	NM_028803.3		74185	118130540	NM_028803.3	Gbe1	NP_083079.1	ILMN_2592690	007610189	S	2459	TTAAATTTGAATTATTCATCAGGCATGATTATTTTGGCTGTAGTAAAAAT	16	+	70569574-70569623	16qC2	Mus musculus glucan (1,4-alpha-), branching enzyme 1 (Gbe1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxyl group in a similar glucan chain [goid 3844] [evidence IEA]	2310045H19Rik; D16Ertd536e; 2810426P10Rik	2310045H19Rik; D16Ertd536e; 2810426P10Rik
Mus musculus	MEEBO	ILMN_195707	ILMN_195707	D630014A15RIK	scl35163.2.1_51						D630014A15Rik		ILMN_1242794	002600471	S	19	CCTTTGTATCAAAGTTGCTGCTTCTTTCCCCTTTATGTGCCTGGGTGGTT										
Mus musculus	RefSeq	ILMN_186725	ILMN_230234	IFI205	NM_172648.3	NM_172648.3		226695	118129997	NM_172648.3	Ifi205	NP_766236.2	ILMN_2680076	006580041	S	1160	CTATGAAATAAAAGATGGTTCAGGAAGCATAGAAGTGGTGGGGAGTGGAC	1|NT_039195.1	+	35612-35661	1qH3	Mus musculus interferon activated gene 205 (Ifi205), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D3; D3cDNA	D3; D3cDNA
Mus musculus	RefSeq	ILMN_186725	ILMN_230234	IFI205	NM_172648.3	NM_172648.3		226695	118129997	NM_172648.3	Ifi205	NP_766236.2	ILMN_1245200	001660184	S	321	CCAGCTGATGCTGGATTGGACAGACTGATCAACTTTTGTGAACGTGTACC	1|NT_039195.1	+	22154-22203	1qH3	Mus musculus interferon activated gene 205 (Ifi205), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D3; D3cDNA	D3; D3cDNA
Mus musculus	RefSeq	ILMN_214274	ILMN_214274	MUP5	NM_008649.2	NM_008649.2		17844	113930707	NM_008649.2	Mup5	NP_032675.2	ILMN_3158509	001820241	A	443	GAGGAAAACTTCCAGCTGATGGAGCTCTTTGGTCGAGAACCAGATTTGAG	4	-	61495621-61495670	4qB3	Mus musculus major urinary protein 5 (Mup5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214274	ILMN_214274	MUP5	NM_008649.2	NM_008649.2		17844	113930707	NM_008649.2	Mup5	NP_032675.2	ILMN_3079257	001710541	I	681	GGGGTGACAAGTTCTGTGATCTGCTTCCATCATGTCTCACAGACAGGTCC	4	-	61494133-61494139:61494692-61494734	4qB3	Mus musculus major urinary protein 5 (Mup5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188046	ILMN_188046	PPP2R5C	scl42770.4.1_3				23956065	NM_012023	Ppp2r5c		ILMN_2742461	002760707	S	1279	CCAAAGCGAATCCCCAGTATGCAGTGTATAGTCAAGCCAGCGCCGTGAGC						A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence ISO]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_188046	ILMN_188046	PPP2R5C	scl42770.4.1_3				23956065	NM_012023	Ppp2r5c		ILMN_2449353	006400739	S	2	CCAGCAGGAAAAATAGCCTCACGGTTGTCCAGTCTTCGACATCTACTAAA						A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence ISO]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216284	ILMN_216284	CPXM2	NM_018867.4	NM_018867.4		55987	142348888	NM_018867.4	Cpxm2	NP_061355.2	ILMN_1259085	006350053	S	3020	CTTCCTAAGAGCAGACAGAAGTGGAGAGCACCCAAGAATGAGTGCTGGGC	7	-	139234927-139234976	7qF3	Mus musculus carboxypeptidase X 2 (M14 family) (Cpxm2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IDA]	CPX-2; Cpx2; 4632435C11Rik	CPX-2; Cpx2; 4632435C11Rik
Mus musculus	MEEBO	ILMN_187355	ILMN_187355	4930565M07RIK	scl25067.1.1_159						4930565M07Rik		ILMN_1249394	003990706	S	7	CTGCTTCAGCTCTGCGACTCGCGGCTCCATAACGCACGCTGAACGCTGAG										
Mus musculus	RefSeq	ILMN_211934	ILMN_211934	SGCA	NM_009161.1	NM_009161.1		20391	6677922	NM_009161.1	Sgca	NP_033187.1	ILMN_2938154	005570279	S	1182	ACATCATGTGCTTTCGGCGTGAAGGACGGCTGAAGAGAGACATGGCCACC	11	-	94785153-94785175:94785444-94785470	11qD	Mus musculus sarcoglycan, alpha (dystrophin-associated glycoprotein) (Sgca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	59kDa; Asg; 50DAG; adhalin	59kDa; Asg; 50DAG; adhalin
Mus musculus	RefSeq	ILMN_217222	ILMN_217222	D730048I06RIK	NM_026593.3	NM_026593.3		68171	124301194	NM_026593.3	D730048I06Rik	NP_080869.1	ILMN_2680481	006980241	S	596	GTCTAATTCTTGTGCTTGGTATCCCTAGACTTATTACCATGAATATAGCT	9	-	35596323-35596372	9qA4	Mus musculus RIKEN cDNA D730048I06 gene (D730048I06Rik), mRNA.					
Mus musculus	MEEBO	ILMN_223837	ILMN_223837	PTPRM	scl49667.33.1_65				6679562	NM_008984	Ptprm		ILMN_1246777	001580484	S	4726	GCCCCGCAGAGGAATCCCTTCCTACCACCAAGTCAAGGAGTTCTACAGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184781	ILMN_184781	2610037P13RIK	scl7880.1.1_99						2610037P13Rik		ILMN_2421512	004780730	S	16	GGGAGTTCCTAGCCTGTATATAAGCATCATACTGTGGGCAGGACAGCTGA										
Mus musculus	RefSeq	ILMN_199804	ILMN_199804	LOC383029	XM_356809.1	XM_356809.1			38077513	XM_356809.1	LOC383029		ILMN_2536549	005720279	S	241	GCTTGTGGAAGAGATGTCTTTAACCAAGCTACTTCAGTCCTAGAACCTTT										
Mus musculus	RefSeq	ILMN_220792	ILMN_220792	EIF4ENIF1	NM_023743.1	NM_023743.1		74203	12963810	NM_023743.1	Eif4enif1	NP_076232.1	ILMN_2956153	000650441	S	3105	GGAGCACACTATGTGAAGATGTTTAGGGGATCCACATACCTACCATGATC	11	+	3144181-3144230	11qA1	Mus musculus eukaryotic translation initiation factor 4E nuclear import factor 1 (Eif4enif1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Clast4; 2610509L04Rik; D11Ertd166e; A930019J01Rik; AU021239; AA410001	Clast4; 2610509L04Rik; D11Ertd166e; A930019J01Rik; AU021239; AA410001
Mus musculus	RefSeq	ILMN_220792	ILMN_220792	EIF4ENIF1	NM_023743.1	NM_023743.1		74203	12963810	NM_023743.1	Eif4enif1	NP_076232.1	ILMN_2726950	004670348	S	2952	AGCAGCCTCTGCCCTCCATGCCCACCAAAGTCATCAGTGTAGATGAACTG	11	+	3144028-3144077	11qA1	Mus musculus eukaryotic translation initiation factor 4E nuclear import factor 1 (Eif4enif1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Clast4; 2610509L04Rik; D11Ertd166e; A930019J01Rik; AU021239; AA410001	Clast4; 2610509L04Rik; D11Ertd166e; A930019J01Rik; AU021239; AA410001
Mus musculus	RefSeq	ILMN_223197	ILMN_223197	TINAGL	NM_023476.1	NM_023476.1		94242	12963690	NM_023476.1	Tinagl	NP_075965.1	ILMN_2976129	001740338	S	1569	ATCGAGACCTTCGTGCTGGGCGTCTGGGGTCGCGTGGGAATGGAGGACAT	4	-	129668380-129668429	4qD2.2	Mus musculus tubulointerstitial nephritis antigen-like (Tinagl), mRNA.				1110021J17Rik; Lcn7; Arg1	1110021J17Rik; Lcn7; Arg1
Mus musculus	RefSeq	ILMN_196641	ILMN_312548	LOC632684	XR_031426.1	XR_031426.1		632684	149270901	XR_031426.1	LOC632684		ILMN_1248468	005670743	S	3439	AAATGAAATAGTGCTTCTGGCTGTGCGGGCATAAATCTCCAACCCTGGCC					PREDICTED: Mus musculus hypothetical LOC632684 (LOC632684), misc RNA.					
Mus musculus	Riken	ILMN_205965	ILMN_205965	C230078J11RIK	ri|C230078J11|PX00176M22|AK048878|2018					AK048878	C230078J11Rik		ILMN_1258248	006280064	S	1261	CAGTTAGGCACAGCAGAGGCTCATGATGGCAATTGCTCACGGCTCTCCAC										
Mus musculus	RefSeq	ILMN_215052	ILMN_312622	LOC100040592	XM_001475189.1	XM_001475189.1		100040592	149264811	XM_001475189.1	LOC100040592	XP_001475239.1	ILMN_2654952	006940521	S	3151	CTGGCGGTACTGGCACGGAGCGTTAACCACACCTTACTAATAGCAAGGCC	13|NT_166323.1	-	95203-95252		PREDICTED: Mus musculus similar to Hmgcs1 protein, transcript variant 1 (LOC100040592), mRNA.					
Mus musculus	RefSeq	ILMN_184318	ILMN_259151	PKN2	NM_178654.3	NM_178654.3		109333	142361805	NM_178654.3	Pkn2	NP_848769.1	ILMN_2768805	000050437	S	3333	GAAAACAGCAGCCCTGCATTTCCTTTCCGTGCCACCAGGAGCTTCTGAGA	3	-	142456676-142456725	3qH1	Mus musculus protein kinase N2 (Pkn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	6030436C20Rik; Prkcl2; Stk7; AI507382; PRK2	6030436C20Rik; Prkcl2; Stk7; AI507382; PRK2
Mus musculus	RefSeq	ILMN_184318	ILMN_259151	PKN2	NM_178654.3	NM_178654.3		109333	142361805	NM_178654.3	Pkn2	NP_848769.1	ILMN_2679815	001410309	S	1340	GTGCCAAGATATCCTAGAGAATGTACCTGGACGGTCAAAAGCAACGTCGG	3	-	142484593-142484642	3qH1	Mus musculus protein kinase N2 (Pkn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	6030436C20Rik; Prkcl2; Stk7; AI507382; PRK2	6030436C20Rik; Prkcl2; Stk7; AI507382; PRK2
Mus musculus	RefSeq	ILMN_189212	ILMN_228982	NCK1	NM_010878.2	NM_010878.2		17973	34328186	NM_010878.2	Nck1	NP_035008.2	ILMN_2750999	001990301	S	1611	GATAAAGGACATTCTTGTAAAGTGTTAATCTTTTCTGTGACTAAATAGCA	9	-	100395446-100395495	9qE3.3	Mus musculus non-catalytic region of tyrosine kinase adaptor protein 1 (Nck1), mRNA.	The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]	The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330586M15Rik; Nck; D230010O13Rik	6330586M15Rik; Nck; D230010O13Rik
Mus musculus	RefSeq	ILMN_228982	ILMN_228982	NCK1	NM_010878.2	NM_010878.2		17973	34328186	NM_010878.2	Nck1	NP_035008.2	ILMN_2917618	007560452	S	1236	CCACAGCTTTAACTGGTCATGTAACTGGAGACTGAGAAAGTGCTGGGCCA	9	-	100395821-100395870	9qE3.3	Mus musculus non-catalytic region of tyrosine kinase adaptor protein 1 (Nck1), mRNA.	The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]	The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330586M15Rik; Nck; D230010O13Rik	6330586M15Rik; Nck; D230010O13Rik
Mus musculus	RefSeq	ILMN_189212	ILMN_228982	NCK1	NM_010878.2	NM_010878.2		17973	34328186	NM_010878.2	Nck1	NP_035008.2	ILMN_1248259	006350598	S	287	CCTGAAGGACACCTTAGGTATTGGAAAAGTGAAAAGAAAACCCAGTGTTC	9	-	100398356-100398389:100408848-100408863	9qE3.3	Mus musculus non-catalytic region of tyrosine kinase adaptor protein 1 (Nck1), mRNA.	The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]	The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330586M15Rik; Nck; D230010O13Rik	6330586M15Rik; Nck; D230010O13Rik
Mus musculus	RefSeq	ILMN_223379	ILMN_223379	OLFR472	NM_146774.1	NM_146774.1		258770	22129298	NM_146774.1	Olfr472	NP_666985.1	ILMN_2763304	006200561	S	759	GACCATTACCGTCATTTACGTGATGCCCAAATCGAGCTACTCTACTGAAC	7	+	115046991-115047040	7qE3	Mus musculus olfactory receptor 472 (Olfr472), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-5	MOR204-5
Mus musculus	RefSeq	ILMN_210538	ILMN_210538	CLEC4A3	NM_153197.3	NM_153197.3		73149	110625688	NM_153197.3	Clec4a3	NP_694877.2	ILMN_3161652	004810154	S	845	AAATCATCGTCAGAGTACTGGATGGGGCTGGAGTGATATCCCTTGCAGTG	6	+	122919437-122919486	6qF2	Mus musculus C-type lectin domain family 4, member a3 (Clec4a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mDcir3; Dcir3; 3110037K17Rik	mDcir3; Dcir3; 3110037K17Rik
Mus musculus	RefSeq	ILMN_210538	ILMN_210538	CLEC4A3	NM_153197.3	NM_153197.3		73149	110625688	NM_153197.3	Clec4a3	NP_694877.2	ILMN_2606619	003190470	S	1062	TGATAATACTGGCACATGTGTAAACTTACTTGGTCATTGTCATTCTCTTA	6	+	122919654-122919703	6qF2	Mus musculus C-type lectin domain family 4, member a3 (Clec4a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mDcir3; Dcir3; 3110037K17Rik	mDcir3; Dcir3; 3110037K17Rik
Mus musculus	RefSeq	ILMN_184979	ILMN_184979	ZFP445	NM_173364.4	NM_173364.4		235682	71896628	NM_173364.4	Zfp445	NP_775540.3	ILMN_1217631	007610736	S	698	GAGGACCACTTGGAGACTTCACATGGAATAGGAATTTGTGACGTCCTGGC	9	-	122766598-122766647	9qF4	Mus musculus zinc finger protein 445 (Zfp445), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ZNF168; mszf50; mszf29; AW610627	ZNF168; mszf50; mszf29; AW610627
Mus musculus	RefSeq	ILMN_211648	ILMN_211648	ERLIN2	NM_153592.1	NM_153592.1		244373	23956395	NM_153592.1	Erlin2	NP_705820.1	ILMN_1241908	005870435	S	3402	CGGCCTGTGGGGCCGTGTGTCTTGTGAAAGTGAGATAGCCGTGCTTACTG	8	+	28149424-28149473	8qA2	Mus musculus ER lipid raft associated 2 (Erlin2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			MGC27952; C87251; BC036333; Spfh2	MGC27952; C87251; BC036333; Spfh2
Mus musculus	RefSeq	ILMN_211648	ILMN_211648	ERLIN2	NM_153592.1	NM_153592.1		244373	23956395	NM_153592.1	Erlin2	NP_705820.1	ILMN_1246564	002030286	S	89	CCGTGGCTTCCAGTTTCTTTTGTGCATCTCTCTTCTCAGCTGTGCACAAG	8	+	28135569-28135618	8qA2	Mus musculus ER lipid raft associated 2 (Erlin2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			MGC27952; C87251; BC036333; Spfh2	MGC27952; C87251; BC036333; Spfh2
Mus musculus	RefSeq	ILMN_211648	ILMN_211648	ERLIN2	NM_153592.1	NM_153592.1		244373	23956395	NM_153592.1	Erlin2	NP_705820.1	ILMN_2816315	005390520	S	3654	GCAATTTTTTCAGTGTGCCCCAAGGGCATTAATGAGCCTTTATAACTGAG	8	+	28149676-28149725	8qA2	Mus musculus ER lipid raft associated 2 (Erlin2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			MGC27952; C87251; BC036333; Spfh2	MGC27952; C87251; BC036333; Spfh2
Mus musculus	RefSeq	ILMN_186709	ILMN_247932	SLC16A14	NM_027921.1	NM_027921.1		71781	41281605	NM_027921.1	Slc16a14	NP_082197.1	ILMN_1217704	000160474	S	1988	GATACAGATGCCCTTATGAAAACTTTCAAGCCAGGCATGTTGGCAAATGC	1	-	84903591-84903640	1qC5	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 14 (Slc16a14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	1110004H10Rik	1110004H10Rik
Mus musculus	Riken	ILMN_205696	ILMN_205696	GUKMI1	ri|B430214A18|PX00071B24|AK046635|1428					AK046635	Gukmi1		ILMN_2574544	007040390	S	1030	GCACTAGACAGACTGTGCTGGGTTGTTTCTCATACTGTGTGTGGCCCATT										
Mus musculus	RefSeq	ILMN_216075	ILMN_216075	RXFP4	NM_181817.1	NM_181817.1		242093	32451489	NM_181817.1	Rxfp4	NP_861538.1	ILMN_1247110	004780156	S	930	TGTGATCTATTGTCTCCTGCGGCGGGAGCCCCAGCAGGTTCTTGTCAGCT	3	-	88456085-88456134	3qF1	Mus musculus relaxin family peptide receptor 4 (Rxfp4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 4945] [evidence IEA]	GPCR142; MGC130215; Rln3r2; SALPR; Gpr100	GPCR142; MGC130215; Rln3r2; SALPR; Gpr100
Mus musculus	MEEBO	ILMN_218111	ILMN_218111	1110005A03RIK	scl074319.4_0				31980785	NM_028865	1110005A03Rik		ILMN_1244997	002190097	S	535	GCCACAGTATACTTCCTGATGCAGAAGAATCCAAAAGTTCAATTTTGGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_190785	ILMN_252535	SNX4	NM_080557.2	NM_080557.2		69150	118131100	NM_080557.2	Snx4	NP_542124.1	ILMN_3162089	002470068	S	2109	GGTGTAGCATCTCCATGTGTGAGACACTCGTAGTGAGCACATGTGAGCGG	16	+	33299315-33299364	16qB3	Mus musculus sorting nexin 4 (Snx4), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI037066; 1810036H14Rik	AI037066; 1810036H14Rik
Mus musculus	RefSeq	ILMN_212974	ILMN_212974	CASP9	NM_015733.4	NM_015733.4		12371	118131034	NM_015733.4	Casp9	NP_056548.2	ILMN_2674731	000840411	S	1324	CCAAGGCCCTTGGACCAGCTGGATGCTGTGTCAAGTTTGCCTACCCCCAG	4	+	141367552-141367601	4qE1	Mus musculus caspase 9 (Casp9), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	ICE-LAP6; Mch6; AW493809; Caspase-9; AI115399	ICE-LAP6; Mch6; AW493809; Caspase-9; AI115399
Mus musculus	RefSeq	ILMN_212974	ILMN_212974	CASP9	NM_015733.4	NM_015733.4		12371	118131034	NM_015733.4	Casp9	NP_056548.2	ILMN_2758139	007320274	S	1123	TGCTCCGTGTCCATTGAGAAAATTGTGAATATCTTCAACGGGAGCGGCTG	4	+	141363075-141363124	4qE1	Mus musculus caspase 9 (Casp9), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	ICE-LAP6; Mch6; AW493809; Caspase-9; AI115399	ICE-LAP6; Mch6; AW493809; Caspase-9; AI115399
Mus musculus	RefSeq	ILMN_212974	ILMN_212974	CASP9	NM_015733.4	NM_015733.4		12371	118131034	NM_015733.4	Casp9	NP_056548.2	ILMN_1217061	007210706	S	3749	GCCTCTGTGGATTGGGCGCAAAGGTTAAAGCCAGGGGAATCTTCATTTCT	4	+	141371743-141371792	4qE1	Mus musculus caspase 9 (Casp9), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	ICE-LAP6; Mch6; AW493809; Caspase-9; AI115399	ICE-LAP6; Mch6; AW493809; Caspase-9; AI115399
Mus musculus	Riken	ILMN_202037	ILMN_202037	2610001C07RIK	ri|2610001C07|ZX00052N24|AK011251|2187					AK011251	2610001C07Rik		ILMN_2546542	001050301	S	2130	GCCTGGCCTAATAGAGAGTCTTGGGCCAACCAGGCTACCTAATAAGACCC										
Mus musculus	RefSeq	ILMN_187845	ILMN_255342	B230208N19RIK	XM_981366.1	XM_981366.1		320243	94376324	XM_981366.1	B230208N19Rik	XP_986460.1	ILMN_1213005	001050398	S	4709	CTGCTTGGCAATTCTGTGAGGCAGAGACCCAGGTAAAGGCTTATTTCTGC					PREDICTED: Mus musculus RIKEN cDNA B230208N19 gene, transcript variant 1 (B230208N19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198976	ILMN_198976	LOC234987	XM_134668.2	XM_134668.2			38090278	XM_134668.2	LOC234987		ILMN_1240415	001400692	S	120	GGAGAAGCAGCTGCCCGTCTTGGACAAGACCAAGTTCCTGGTACCTGATT										
Mus musculus	RefSeq	ILMN_215900	ILMN_215900	PHF2	NM_011078.2	NM_011078.2		18676	31543475	NM_011078.2	Phf2	NP_035208.2	ILMN_2664950	005270246	S	4831	TGTTTCTACACCCGTTACCCGGATGTGTTGTCCACGAGGAGATGCAGCTT	13	-	48897496-48897545	13qA5	Mus musculus PHD finger protein 2 (Phf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189712	ILMN_261063	CDC25A	NM_007658.3	NM_007658.3		12530	92373435	NM_007658.3	Cdc25a	NP_031684.3	ILMN_2773110	003440100	S	2271	GCCTGTCACGAGGAGAGAAAAGCCGCCCAAGTGCTGCTGGCCAAATACCA	9	+	109795038-109795087	9qF2	Mus musculus cell division cycle 25 homolog A (S. pombe) (Cdc25a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through M phase, the part of the mitotic cell cycle during which mitosis takes place [goid 87] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	D9Ertd393e	D9Ertd393e
Mus musculus	RefSeq	ILMN_194408	ILMN_250462	WSB1	NM_001042565.2	NM_001042565.2		78889	141803466	NM_001042565.2	Wsb1	NP_001036030.1	ILMN_1250815	001230722	S	1999	GGTTGGCTCTCATCAGCCTTAATTTTGGAAAGCAGCTACTTACCCCTCAG	11	-	79053179-79053228	11qB5	Mus musculus WD repeat and SOCS box-containing 1 (Wsb1), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		2700038M07Rik; 1110056B13Rik	2700038M07Rik; 1110056B13Rik
Mus musculus	RefSeq	ILMN_251056	ILMN_251056	4930481M05	NM_183320.1	NM_183320.1		331529	34304007	NM_183320.1	4930481M05	NP_899143.1	ILMN_3008672	005310315	S	2574	AAGGGAGCAGACAGAGAAGCCTGAGTCCCCACCCAGCCATCAGGAGTGCA	X	+	130728495-130728544	XqF1	Mus musculus hypothetical protein 4930481M05 (4930481M05), mRNA.					
Mus musculus	RefSeq	ILMN_256942	ILMN_256942	MGC107702	NM_001037930.2	NM_001037930.2		627782	118131020	NM_001037930.2	MGC107702	NP_001033019.1	ILMN_2864179	006370209	S	1361	GCCCGCCTGGATGCTGCCATCCTTCCTGCCATGAGGAAAACAGATAAACC				XqA1.1	Mus musculus similar to proteasome (prosome, macropain) subunit, beta type 7 (MGC107702), mRNA.					
Mus musculus	RefSeq	ILMN_197406	ILMN_248574	PAK6	NM_001033254.2	NM_001033254.2		214230	142347489	NM_001033254.2	Pak6	NP_001028426.1	ILMN_1217734	000770041	S	548	CCTCTGAAGGTTCTGGGAGAGAAGGGGAGTCTAGTCCACACCGACTGGAG	2	+	118489586-118489635	2qE5	Mus musculus p21 (CDKN1A)-activated kinase 6 (Pak6), mRNA. XM_924943 XM_924947 XM_924951 XM_924953	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	4732456M09	4732456M09
Mus musculus	RefSeq	ILMN_212716	ILMN_212716	MLPH	NM_053015.2	NM_053015.2		171531	87080830	NM_053015.2	Mlph	NP_443748.2	ILMN_3162347	004480239	S	2627	CCTCCAACACAGGCTTTTGGGGTACACTACATGGGGACCTCGCTTTCTAG	1	+	92845869-92845918	1qD	Mus musculus melanophilin (Mlph), mRNA.	A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IMP]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IMP]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IMP]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with the plus end of a microtubule [goid 51010] [evidence IPI]; Interacting selectively with a class V myosin; myosin V is a dimeric molecule involved in intracellular transport [goid 31489] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IDA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IDA]	5031433I09Rik; Slac-2a; l(1)-3Rk; 2210418F23Rik; ln; AW228792; D1Wsu84e; l1Rk3	5031433I09Rik; Slac-2a; l(1)-3Rk; 2210418F23Rik; ln; AW228792; D1Wsu84e; l1Rk3
Mus musculus	RefSeq	ILMN_261557	ILMN_261557	ZSCAN4C	NM_001013765.2	NM_001013765.2		245109	118131157	NM_001013765.2	Zscan4c	NP_001013787.1	ILMN_3013659	000010703	I	927	CCCCAGTCATCATGTAGACTTCCCGAGTGCTCCGACTACTGCCGATGTCC	7	+	11594547-11594596	7qA1	Mus musculus zinc finger and SCAN domain containing 4C (Zscan4c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	XM_142517	XM_142517
Mus musculus	RefSeq	ILMN_187872	ILMN_258242	HVCN1	NM_001042489.1	NM_001042489.1		74096	109809756	NM_001042489.1	Hvcn1	NP_001035954.1	ILMN_1243451	007510008	S	2422	CCACGCTGGTACAGCAGAGCTGGTCCAACCACAGTTCAGTGCTCACAAAT	5	+	122691946-122691995	5qF	Mus musculus hydrogen voltage-gated channel 1 (Hvcn1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus [goid 9268] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a proton by a voltage-gated channel [goid 30171] [evidence IDA]	AI450555; mVSOP; 0610039P13Rik	AI450555; mVSOP; 0610039P13Rik
Mus musculus	RefSeq	ILMN_258242	ILMN_258242	HVCN1	NM_001042489.1	NM_001042489.1		74096	109809756	NM_001042489.1	Hvcn1	NP_001035954.1	ILMN_3124528	000620646	A	2658	GAGCTGTGAGGACGACCCCAGCCCCAATACCCCCTTGTAAAGGAACTGAA	5	+	122692182-122692231	5qF	Mus musculus hydrogen voltage-gated channel 1 (Hvcn1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus [goid 9268] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a proton by a voltage-gated channel [goid 30171] [evidence IDA]	AI450555; mVSOP; 0610039P13Rik	AI450555; mVSOP; 0610039P13Rik
Mus musculus	RefSeq	ILMN_212230	ILMN_212230	MCOLN3	NM_134160.1	NM_134160.1		171166	19527069	NM_134160.1	Mcoln3	NP_598921.1	ILMN_1256430	000050487	S	1661	GTAACTGTTGGGCTTCTCTGTGCTTGGGAGGAAAATACAGTGTGTGGCTG	3	+	145803559-145803562:145803563-145803608	3qH2	Mus musculus mucolipin 3 (Mcoln3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	TRPML3; MGC124246; MGC124245; Va; 6720490O21Rik	TRPML3; MGC124246; MGC124245; Va; 6720490O21Rik
Mus musculus	MEEBO	ILMN_190164	ILMN_190164	AW120700	scl099327.2_34						AW120700		ILMN_1260036	003830520	S	20	GTTTTCAATGTGTTTTTAGTGCCAGGCAGTCTTGGTTCCGAAGGGAACAG										
Mus musculus	RefSeq	ILMN_220549	ILMN_225596	OLFR695	NM_146598.1	NM_146598.1		258591	22129452	NM_146598.1	Olfr695	NP_666809.1	ILMN_1237320	005390703	S	872	GCCTGAGGAATAATGAGGTTATTGAGGCTTTGAAAAGAGTCCTGGGAAAA	7	-	113857272-113857321	7qE3	Mus musculus olfactory receptor 695 (Olfr695), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC123711; MOR283-6; MGC123710	MGC123711; MOR283-6; MGC123710
Mus musculus	RefSeq	ILMN_196379	ILMN_233170	5530401N06RIK	XM_896507.2	XM_896507.2		71386	94363745	XM_896507.2	5530401N06Rik	XP_901600.1	ILMN_2523891	006290446	S	476	GCTGCTAGCTTGGGATGTCTGGCCCCTGAGCAAGTGCTACCAGTACCGAT	1	+	83057980-83057987:83057988-83058029	1qC5	PREDICTED: Mus musculus RIKEN cDNA 5530401N06 gene (5530401N06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_236307	ILMN_236307	CASP8	NM_001080126.1	NM_001080126.1		12370	122056577	NM_001080126.1	Casp8	NP_001073595.1	ILMN_3097868	001190068	A	1593	GGAGGAACAAGGGAAAGCAGATGCCACAGCCCACCTTCACACTACGGAAG	1	+	58903528-58903577	1qC1.3	Mus musculus caspase 8 (Casp8), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A heterodimer associated with 90S and 66S preribosomes in the nucleolus; involved in ribosomal large subunit biogenesis [goid 30690] [evidence IMP]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	MACH; Caspase-8; FLICE; Mch5	MACH; Caspase-8; FLICE; Mch5
Mus musculus	MEEBO	ILMN_186428	ILMN_186428	5830406C15RIK	scl067597.1_107						5830406C15Rik		ILMN_2435477	002260114	S	16	CTGGGGGAAGACTATCTTTTGGAGTGGAAAACAAGCACAGAAACATCTTC										
Mus musculus	RefSeq	ILMN_200040	ILMN_200040	LOC381638	XM_358633.1	XM_358633.1			38079979	XM_358633.1	LOC381638		ILMN_1224753	003400435	S	442	CCAGGGTGGAAATAGCCTGAAGATGTCTGCGTGGATGAGGAAGAGGGCTG										
Mus musculus	RefSeq	ILMN_249967	ILMN_249967	SCUBE3	NM_001004366.1	NM_001004366.1		268935	52138545	NM_001004366.1	Scube3	NP_001004366.1	ILMN_2780286	004250731	S	2927	CCTTCATCAAGCTACTGCGCTCCAAAGTCTCCAGCTTCCTGAGGCCTTAC	17	+	28298412-28298461	17qA3.3	Mus musculus signal peptide, CUB domain, EGF-like 3 (Scube3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	D030038I21Rik; CEGF3	D030038I21Rik; CEGF3
Mus musculus	RefSeq	ILMN_198157	ILMN_249967	SCUBE3	NM_001004366.1	NM_001004366.1		268935	52138545	NM_001004366.1	Scube3	NP_001004366.1	ILMN_1218256	001510736	S	2691	CTTCAAGACCAGTGAGGCCAACAGCGCTCGAGGCTTCCAGATTCCCTATG	17	+	28297826-28297873:28298016-28298017	17qA3.3	Mus musculus signal peptide, CUB domain, EGF-like 3 (Scube3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	D030038I21Rik; CEGF3	D030038I21Rik; CEGF3
Mus musculus	Riken	ILMN_205943	ILMN_205943	C130064E22RIK	ri|C130064E22|PX00171K07|AK048477|4157					AK048477	C130064E22Rik		ILMN_1221892	005960338	S	4083	TGGAGACAGAGGCAAGCAGACTGAACTTGGTACAGCTTGGTACAGCTTGG										
Mus musculus	RefSeq	ILMN_195328	ILMN_213075	FBXL7	NM_176959.3	NM_176959.3		448987	61657904	NM_176959.3	Fbxl7	NP_795933.2	ILMN_2514587	004010592	S	3241	GGGGTTAAGTTTGTAAGTGTTTAATTGTACGAATGCCGCCCAGCCCGCTG	15	-	26471539-26471588	15qB1	Mus musculus F-box and leucine-rich repeat protein 7 (Fbxl7), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		FBL7; Fbl6; D230018M15Rik; MGC102204; AL023057	FBL7; Fbl6; D230018M15Rik; MGC102204; AL023057
Mus musculus	RefSeq	ILMN_197392	ILMN_197392	LOC218696	XM_122655.5	XM_122655.5			38075548	XM_122655.5	LOC218696		ILMN_2527975	006940725	S	108	CAGAGGGGACCAGAAGCCCGAGGACTCCGAGGAAGGCGAGCTCCAGACTT										
Mus musculus	Riken	ILMN_207077	ILMN_207077	B930085E10RIK	ri|B930085E10|PX00665F01|AK081094|1965					AK081094	B930085E10Rik		ILMN_1240741	002900367	S	1602	GGGGGCAGGCACTTGAGGTAACTGAGTATCTTGCACCTACAGTGGGAAGC										
Mus musculus	RefSeq	ILMN_212624	ILMN_212624	PHLDA3	NM_013750.1	NM_013750.1		27280	7305376	NM_013750.1	Phlda3	NP_038778.1	ILMN_2628567	001980021	S	912	AGTTCCTGGACACTAAGACTGTTGTTATATCCAGCTCAGACTTGCGAGCC	1	+	137665204-137665253	1qE4	Mus musculus pleckstrin homology-like domain, family A, member 3 (Phlda3), mRNA.				Tih1	Tih1
Mus musculus	RefSeq	ILMN_212624	ILMN_212624	PHLDA3	NM_013750.1	NM_013750.1		27280	7305376	NM_013750.1	Phlda3	NP_038778.1	ILMN_2923607	000290328	S	1061	CCCAAAGAAGGGCTGGCTGTTCTTCATGGCGTGCTAAGCCAGTGCCTCAG	1	+	137665353-137665402	1qE4	Mus musculus pleckstrin homology-like domain, family A, member 3 (Phlda3), mRNA.				Tih1	Tih1
Mus musculus	RefSeq	ILMN_196391	ILMN_196391	1110025L11RIK	XM_147270.1	XM_147270.1			20896046	XM_147270.1	1110025L11Rik		ILMN_2523937	000940189	S	6	CTCTACTCAAGAACAACCTCAACAACCAGAACCATGTGTGGCTACTACGG										
Mus musculus	MEEBO	ILMN_190897	ILMN_190897	4930555K19RIK	scl075362.5_0						4930555K19Rik		ILMN_1228716	000460356	S	6	GACGGCGAGGGGAACAGCCAGAGACAGGGTCTCATTATTTATAAGTAGCC										
Mus musculus	MEEBO	ILMN_220207	ILMN_220207	A2BP1	scl0001825.1_141				34147247	NM_183188	A2bp1		ILMN_2719097	001770170	S	142	GGAATAAAGCCTCCATTTAAAGCATGTTGGCGTCGCAAGGAGTCCTTCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200818	ILMN_236365	GM1141	NM_001033470.2	NM_001033470.2		382221	142387299	NM_001033470.2	Gm1141	NP_001028642.1	ILMN_1236192	000630523	S	1525	AAGAGAGAACAGGCCACGCTTTCTGCCCCCTGGACAAGATCACGCCGGTT	X	+	69185587-69185636	XqA7.3	Mus musculus gene model 1141, (NCBI) (Gm1141), mRNA.					
Mus musculus	MEEBO	ILMN_191244	ILMN_191244	ITSN1	scl48870.1_132				6754391	NM_010587	Itsn1		ILMN_1244277	007150471	S	4855	GCTCTCAGTGCCACATCACCAAGACAATCCAGGACACGCTAAACCCCAAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_237153	ILMN_237153	ZFP74	NM_178384.2	NM_178384.2		72723	31341627	NM_178384.2	Zfp74	NP_848471.1	ILMN_2821631	003870711	S	2362	GCCTTGGGAAGGTCCCATGCATCTGTTAGACAATTCCCACTTCGGGGACC	7	-	30719113-30719162	7qB1	Mus musculus zinc finger protein 74 (Zfp74), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mszf77; mszf21; Zfp66; 2810054M15Rik; KRAB8	mszf77; mszf21; Zfp66; 2810054M15Rik; KRAB8
Mus musculus	RefSeq	ILMN_197544	ILMN_197544	LOC381445	XM_130900.2	XM_130900.2			38076505	XM_130900.2	LOC381445		ILMN_1246494	004250114	S	1711	GCTGACAGCAGTGGCATTGCACCTAAAGGACTAGATGGTCCCCGGCCATC										
Mus musculus	Riken	ILMN_204519	ILMN_204519	B230333P14RIK	ri|B230333P14|PX00160M20|AK046017|2166					AK046017	B230333P14Rik		ILMN_1218492	004230546	S	1945	CTGGAAGTGCCATAGCCCACACTTGAGACTGTGGTGTTCATATGCCTGCG										
Mus musculus	RefSeq	ILMN_216325	ILMN_216325	PHCA	NM_025408.2	NM_025408.2		66190	84794580	NM_025408.2	Phca	NP_079684.2	ILMN_2669782	002370279	S	1135	GGTGGAGAATTTGGGCTTTTCTTAACAGGTTAACAGTTTGTGCTGGTCAT	7	-	105365043-105365092	7qE2	Mus musculus phytoceramidase, alkaline (Phca), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]	1110057L18Rik; AV015045; 5430429L08Rik	1110057L18Rik; AV015045; 5430429L08Rik
Mus musculus	RefSeq	ILMN_216325	ILMN_216325	PHCA	NM_025408.2	NM_025408.2		66190	84794580	NM_025408.2	Phca	NP_079684.2	ILMN_2681057	005310768	S	1039	TGGCCTGTTGGGTATTTAGCTCCTGGCTTTATCTCGTTTGCCCTGGACCT	7	-	105365139-105365188	7qE2	Mus musculus phytoceramidase, alkaline (Phca), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]	1110057L18Rik; AV015045; 5430429L08Rik	1110057L18Rik; AV015045; 5430429L08Rik
Mus musculus	Riken	ILMN_202845	ILMN_202845	9130601C02RIK	ri|9130601C02|PX00061J11|AK033736|1567					AK033736	9130601C02Rik		ILMN_1216153	001190674	S	1152	CCCAACTAAGAGCCGGGCTCCATTCAGGGAGTGGCTTATACAGAGAGCTC										
Mus musculus	RefSeq	ILMN_216581	ILMN_216581	PSMD5	NM_080554.2	NM_080554.2		66998	134053912	NM_080554.2	Psmd5	NP_542121.2	ILMN_2765213	001850561	S	1921	CTAAAAAATAAGTCATTTAGAATCATCGAATTATATTATTTGTATATAAG	2	-	34707680-34707729	2qB	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 (Psmd5), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW475925; S5b; mKIAA0072; W91691; 1500032A03Rik; KIAA0072	AW475925; S5b; mKIAA0072; W91691; 1500032A03Rik; KIAA0072
Mus musculus	RefSeq	ILMN_216581	ILMN_216581	PSMD5	NM_080554.2	NM_080554.2		66998	134053912	NM_080554.2	Psmd5	NP_542121.2	ILMN_2672798	000240338	S	218	CAGACTGCTTTGTGTGTCTCCATTCTGGAGAGGCTGCTCCAAGCTGTGGA	2	-	34722503-34722552	2qB	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 (Psmd5), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW475925; S5b; mKIAA0072; W91691; 1500032A03Rik; KIAA0072	AW475925; S5b; mKIAA0072; W91691; 1500032A03Rik; KIAA0072
Mus musculus	RefSeq	ILMN_189690	ILMN_236926	GLRX2	NM_001038592.1	NM_001038592.1		69367	84370339	NM_001038592.1	Glrx2	NP_001033681.1	ILMN_1214664	005810176	S	375	GCTGGAATATGGCAACCAGTTTCAAGATGCGCTTCACAAGATGACTGGGG	1	+	145592296-145592345	1qF	Mus musculus glutaredoxin 2 (thioltransferase) (Glrx2), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	1700010P22Rik; AI645710; Grx2	1700010P22Rik; AI645710; Grx2
Mus musculus	RefSeq	ILMN_190467	ILMN_248249	ME2	NM_145494.2	NM_145494.2		107029	118130149	NM_145494.2	Me2	NP_663469.1	ILMN_1230263	005290333	S	2103	GCGACGGTACTGTCGCTGTTAACGTGAATGTATCTCTCACTTCCCCCCTC	18	-	73929996-73930045	18qE2	Mus musculus malic enzyme 2, NAD(+)-dependent, mitochondrial (Me2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate [goid 4470] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH + H+. Also decarboxylates oxaloacetate [goid 16619] [evidence IEA]	NAD-ME; AW120568; D030040L20Rik	NAD-ME; AW120568; D030040L20Rik
Mus musculus	MEEBO	ILMN_192369	ILMN_192369	GNE	scl24386.16_188				31980684	NM_015828	Gne		ILMN_1216440	006060431	S	1	CACTGCAACCAAACAACTGCACTGTTACCACGCTGTGAGCCATGTATTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid [goid 6054] [evidence TAS]; The chemical reactions and pathways involving UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 6047] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria [goid 9103] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine [goid 8761] [evidence IEA]; Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate [goid 9384] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence ISS]		
Mus musculus	RefSeq	ILMN_210850	ILMN_210850	SHISA2	NM_145463.4	NM_145463.4		219134	141803556	NM_145463.4	Shisa2	NP_663438.1	ILMN_1246285	006900397	S	2609	CGCTGTCACTGGGACATGAGGTGGCACTTAAACCTCAAACGTGAACCACT	14	+	60249987-60250036	14qD1	Mus musculus shisa homolog 2 (Xenopus laevis) (Shisa2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		shisa; 9430059P22Rik; mShisa	shisa; 9430059P22Rik; mShisa
Mus musculus	RefSeq	ILMN_242046	ILMN_242046	ACTN1	NM_134156.1	NM_134156.1		109711	61097905	NM_134156.1	Actn1	NP_598917.1	ILMN_2844996	004590136	S	3388	GGGGTAGGTGGGTACTCTCATCAGAGGCACATTGGTGCATGTGTGTTTGC	12	-	81268775-81268824	12qC3	Mus musculus actinin, alpha 1 (Actn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The lipid bilayer surrounding a dense core granule [goid 32127] [evidence TAS]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence TAS]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence NAS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence TAS]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30865] [evidence TAS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence TAS]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	3110023F10Rik; Actn1a	3110023F10Rik; Actn1a
Mus musculus	RefSeq	ILMN_216197	ILMN_216197	MRPL45	NM_025927.2	NM_025927.2		67036	31560199	NM_025927.2	Mrpl45	NP_080203.1	ILMN_2939080	004760468	S	1936	GAGTGCACCGTCACTGTCTTCAGACACACCAGAAGAGGATCCCATTACAG	11	+	97145655-97145704	11qD	Mus musculus mitochondrial ribosomal protein L45 (Mrpl45), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	R75241; 2600005P05Rik; AU043542	R75241; 2600005P05Rik; AU043542
Mus musculus	MEEBO	ILMN_211923	ILMN_211923	A930010I20RIK	scl22790.20.1_134				46849717	NM_177857	A930010I20Rik		ILMN_2620799	000630327	S	4769	AGGAGGGTTTACTGTGGTCAATCATGACTGTCCCTCTGCAGGGAGACTGC										
Mus musculus	RefSeq	ILMN_223386	ILMN_223386	POLE2	NM_011133.2	NM_011133.2		18974	141803017	NM_011133.2	Pole2	NP_035263.1	ILMN_2763371	005690504	S	1618	GAGAATATATGAAATGAATTTTCTTATTTTTATCTTATGTATTTTGTATA	12	-	70302793-70302842	12qC2	Mus musculus polymerase (DNA directed), epsilon 2 (p59 subunit) (Pole2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212078	ILMN_212078	LCN3	NM_010694.1	NM_010694.1		16820	6754513	NM_010694.1	Lcn3	NP_034824.1	ILMN_1236379	004880519	S	580	ATGTCTGTCCCATGGGAGGTGGAAAGAGTGGCCTGCTGGATCCTCCGACT	2	+	25623515-25623564	2qA3	Mus musculus lipocalin 3 (Lcn3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	MGC151195; MGC151193; Vnsp1	MGC151195; MGC151193; Vnsp1
Mus musculus	RefSeq	ILMN_218816	ILMN_218816	IQCG	NM_178378.2	NM_178378.2		69707	31341642	NM_178378.2	Iqcg	NP_848465.1	ILMN_1241911	003060451	S	2493	TGAGTGGAGCCTTCTCATCCACTGCCTACGCAGGCCAGCCTGCTATCTGT	16	-	33015824-33015873	16qB3	Mus musculus IQ motif containing G (Iqcg), mRNA.				2400003L07Rik	2400003L07Rik
Mus musculus	RefSeq	ILMN_219426	ILMN_219426	TK2	NM_021028.2	NM_021028.2		57813	10835110	NM_021028.2	Tk2	NP_066356.2	ILMN_1214486	003310725	S	2268	CGAACAGTCTAGTACTTGCCCTTTGCTCTACCAGAACACTTGTTTTGGGG	8	-	106750651-106750700	8qD3	Mus musculus thymidine kinase 2, mitochondrial (Tk2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + thymidine = ADP + thymidine 5'-phosphate [goid 4797] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AU024611	AU024611
Mus musculus	RefSeq	ILMN_224949	ILMN_224949	LOC547323	NM_001042554.1	NM_001042554.1		547323	110347542	NM_001042554.1	LOC547323	NP_001036019.1	ILMN_2995934	005690431	S	301	TCCTACTCTGCGACACCTTATCTGTTCTGGTATGTCCAGTACCCGCGGCA	14	+	53546242-53546291		Mus musculus similar to RIKEN cDNA A430107P09 gene (LOC547323), mRNA.				MGC123444; MGC123445	MGC123444; MGC123445
Mus musculus	RefSeq	ILMN_191286	ILMN_224949	LOC547323	NM_001042554.1	NM_001042554.1		547323	110347542	NM_001042554.1	LOC547323	NP_001036019.1	ILMN_2477805	001240100	S	183	CCTCCCAGTGCTGGGGATACACTTTGTCCTGAGAGATGCCCAAGCTCAGT	14	+	53546029-53546060:53546156-53546173		Mus musculus similar to RIKEN cDNA A430107P09 gene (LOC547323), mRNA.				MGC123444; MGC123445	MGC123444; MGC123445
Mus musculus	RefSeq	ILMN_211655	ILMN_211655	SMOC1	NM_022316.1	NM_022316.1		64075	11612484	NM_022316.1	Smoc1	NP_071711.1	ILMN_1225376	005890195	S	3299	AGGAGTTTAGAATCTGACCAGCCAACTTCTCTCTCACAGATGGGCGTAGG	12	+	82287260-82287309	12qD1	Mus musculus SPARC related modular calcium binding 1 (Smoc1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SRG; AI848508; 2600002F22Rik	SRG; AI848508; 2600002F22Rik
Mus musculus	RefSeq	ILMN_218289	ILMN_218289	RPIA	NM_009075.2	NM_009075.2		19895	94536843	NM_009075.2	Rpia	NP_033101.2	ILMN_2693985	006250291	S	1479	CAGCGGGGCTGTAGTGACGTGGGTACAAACTCCAGGTGAGCGAGAATGCA	6	-	70715957-70716006	6qC1	Mus musculus ribose 5-phosphate isomerase A (Rpia), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P [goid 9052] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate [goid 4751] [evidence IEA]; Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate [goid 4751] [evidence IDA]	RPI	RPI
Mus musculus	RefSeq	ILMN_223090	ILMN_223090	NFKBID	NM_172142.3	NM_172142.3		243910	146149240	NM_172142.3	Nfkbid	NP_742154.1	ILMN_1225192	000630091	S	1913	CATTTAGAACCCAATGTCTCTGACGCTAGCATTCCCCGTGATTGTTCCCC				7qB1	Mus musculus nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta (Nfkbid), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]		MGC130396; IkappaBNS	MGC130396; IkappaBNS
Mus musculus	RefSeq	ILMN_210440	ILMN_247825	AA881470	NM_172724.3	NM_172724.3		231841	146198584	NM_172724.3	AA881470	NP_766312.1	ILMN_1253955	006860332	S	1716	TTGCCCTCCAGCTTCTCCAAGACCCAGAGAGTTACGTCCGAGCAAGTGCC				5qG2	Mus musculus EST AA881470 (AA881470), transcript variant 1, mRNA.					
Mus musculus	RefSeq	ILMN_189482	ILMN_247825	AA881470	NM_172724.3	NM_172724.3		231841	146198584	NM_172724.3	AA881470	NP_766312.1	ILMN_1238812	005860095	S	2352	GTCTCATAGCTGCATTGGATCCTTGACAAGTTATCAGGGTCGGGCCGACT				5qG2	Mus musculus EST AA881470 (AA881470), transcript variant 1, mRNA.					
Mus musculus	RefSeq	ILMN_210440	ILMN_247825	AA881470	NM_172724.3	NM_172724.3		231841	146198584	NM_172724.3	AA881470	NP_766312.1	ILMN_2605630	006110739	S	3784	CTCTGCTCCGTCACCCAACGTTTGAAAGTCCCATAATCTTTAAAGAATTC				5qG2	Mus musculus EST AA881470 (AA881470), transcript variant 1, mRNA.					
Mus musculus	RefSeq	ILMN_203470	ILMN_231183	PPP1R7	XM_622874.3	XM_622874.3		66385	94364445	XM_622874.3	Ppp1r7	XP_622874.1	ILMN_1242750	007100189	S	619	TCATCAAACCCCTAACCCAGGTGGAGCCGGAGCCTGTGGGAACTACAATC				1qD	PREDICTED: Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 7, transcript variant 3 (Ppp1r7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186721	ILMN_227100	ZFP518B	NM_001081144.1	NM_001081144.1		100515	124487268	NM_001081144.1	Zfp518b	NP_001074613.1	ILMN_1232176	004200768	S	6688	GCATTACAGCTCCCGTGTGAACAGTTTGTGTGTCTGTCGCTCTGGTTCGG	5	-	39059791-39059840	5qB3	Mus musculus zinc finger protein 518B (Zfp518b), mRNA.				AI661722; AA410078	AI661722; AA410078
Mus musculus	RefSeq	ILMN_186721	ILMN_227100	ZFP518B	NM_001081144.1	NM_001081144.1		100515	124487268	NM_001081144.1	Zfp518b	NP_001074613.1	ILMN_2524394	004210603	S	3803	GTGGATGAGTCACGGCCAGAGGCATTTGATAGAGGCCACCAGAGACTGGG	5	-	39062676-39062725	5qB3	Mus musculus zinc finger protein 518B (Zfp518b), mRNA.				AI661722; AA410078	AI661722; AA410078
Mus musculus	MEEBO	ILMN_187759	ILMN_187759	V1RD7	scl081012.3_170	NM_030737.1			13507697	NM_030737.1	V1rd7		ILMN_2446884	005560707	S	5	CAAACACAATCCTAAATTCCATATTCTTGATAATCTTTTCCTTTTAATAA								Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194918	ILMN_194918	2810037O22RIK	scl46224.2_49						2810037O22Rik		ILMN_2510839	003840551	S	2	GCCAGCCTCCTCCGAGCTTCAGATTGCCTGTCTGATTCCCAAACAACATC										
Mus musculus	Riken	ILMN_206893	ILMN_206893	GALNT3	ri|E030036B02|PX00206J09|AK087219|1546					AK087219	Galnt3		ILMN_1213566	003130564	S	1399	TAAGCCTAGGGCTTCAGGAAATGAGCTGATTATCAGGGGAGTCCGTATGG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]		
Mus musculus	RefSeq	ILMN_253396	ILMN_253396	ADO	NM_001005419.1	NM_001005419.1		211488	53749203	NM_001005419.1	Ado	NP_001005419.1	ILMN_3082206	001050521	A	789	ACTATTACCGTGTAGTGGAGCCCATCAGACCCAAGGAGGCTTCCGGCTCT	10	-	67010852-67010901	10qB5.1	Mus musculus 2-aminoethanethiol (cysteamine) dioxygenase (Ado), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: cysteamine + O2 = hypotaurine [goid 47800] [evidence IEA]	MGC73511; MGC67243	MGC73511; MGC67243
Mus musculus	RefSeq	ILMN_194019	ILMN_232308	NMNAT1	NM_133435.1	NM_133435.1		66454	57527869	NM_133435.1	Nmnat1	NP_597679.1	ILMN_2502596	006560180	S	471	GTGGGCTGATCAAAAGCAAGATTCTAGCCCACAGAAGCCCCAAGAGCCCA	4	-	148843789-148843838	4qE2	Mus musculus nicotinamide nucleotide adenylyltransferase 1 (Nmnat1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IDA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: ATP + nicotinate ribonucleotide = diphosphate + deamido-NAD+ [goid 4515] [evidence IDA]; Catalysis of the reaction: ATP + nicotinamide nucleotide = diphosphate + NAD+ [goid 309] [evidence IDA]	5730441G13Rik; D4Cole1e; 2610529L11Rik; nmnat	5730441G13Rik; D4Cole1e; 2610529L11Rik; nmnat
Mus musculus	RefSeq	ILMN_202725	ILMN_253654	RSNL2	XM_981706.1	XM_981706.1		78785	94403078	XM_981706.1	Rsnl2	XP_986800.1	ILMN_1226107	005720647	S	930	GGCTTGAATTCAGAGGCTGTTCCTGACTGAGCTCTTACAGGGGCAAGCGC				17qE1.3	PREDICTED: Mus musculus restin-like 2, transcript variant 3 (Rsnl2), mRNA.					
Mus musculus	RefSeq	ILMN_211889	ILMN_211889	CTPS	NM_016748.1	NM_016748.1		51797	7949028	NM_016748.1	Ctps	NP_058028.1	ILMN_1219712	007100685	S	1447	GGAACCATGAGGCTGGGCAAGAGGAGAACCCTGTTCCAGACCAAGAACTC	4	-	120215360-120215370:120216333-120216371	4qD2.2	Mus musculus cytidine 5'-triphosphate synthase (Ctps), mRNA.		The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211889	ILMN_211889	CTPS	NM_016748.1	NM_016748.1		51797	7949028	NM_016748.1	Ctps	NP_058028.1	ILMN_2620435	005050577	S	2481	GGTAACCGGTTCTAAAGCCCTCTCTTGTGTGTGCACCGTTGGCTTGAAGG	4	-	120212602-120212651	4qD2.2	Mus musculus cytidine 5'-triphosphate synthase (Ctps), mRNA.		The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211889	ILMN_211889	CTPS	NM_016748.1	NM_016748.1		51797	7949028	NM_016748.1	Ctps	NP_058028.1	ILMN_2932964	003140220	S	2398	CCCCGGGTCTCTGGCTACACTTTCTATTCCTGGGGCTGAGAAAACTCCTT	4	-	120212685-120212734	4qD2.2	Mus musculus cytidine 5'-triphosphate synthase (Ctps), mRNA.		The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211615	ILMN_211615	4931431C16RIK	scl26692.4.1_10	NM_175208.2			31340801	NM_175208.2	4931431C16Rik		ILMN_1222973	005700452	S	1877	AGGGAAATGACTGAAGGGAGGGCAGCCTAAGGAATATGATTGCTCCCACC										
Mus musculus	RefSeq	ILMN_216666	ILMN_216666	6330416G13RIK	NM_144905.2	NM_144905.2		230279	27885006	NM_144905.2	6330416G13Rik	NP_659154.2	ILMN_2875169	002370669	S	3372	CCTGCCATCTTGTCTCTGTCCCACCAGTCACCAGGGAGGAGAACTCGTGC	4	+	63247125-63247174	4qC1	Mus musculus RIKEN cDNA 6330416G13 gene (6330416G13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC31101; bM230C2.2; AW492431	MGC31101; bM230C2.2; AW492431
Mus musculus	RefSeq	ILMN_211968	ILMN_211968	PARP3	NM_145619.2	NM_145619.2		235587	25014094	NM_145619.2	Parp3	NP_663594.2	ILMN_2870302	006450458	S	2442	CCCACGTGTGAGATCGTGTGGCTTTTGTCTTTCTGGACCTGGCTAACTTG	9	-	106372825-106372874	9qF1	Mus musculus poly (ADP-ribose) polymerase family, member 3 (Parp3), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AW990611; Adprt3; A930002C11Rik; pADPRT-3; Adprtl3; PARP-3	AW990611; Adprt3; A930002C11Rik; pADPRT-3; Adprtl3; PARP-3
Mus musculus	RefSeq	ILMN_209475	ILMN_209475	AEN	NM_026531.3	NM_026531.3		68048	142358361	NM_026531.3	Aen	NP_080807.2	ILMN_2656453	004290554	S	2284	GGCTATTACACAGCACACTGTTTGATTTGGTCTCTCCCCAAAGCTAGGCT	7	+	86053423-86053472	7qD3	Mus musculus apoptosis enhancing nuclease (Aen), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]	2700083B06Rik	2700083B06Rik
Mus musculus	RefSeq	ILMN_199385	ILMN_199385	OLFR1221	NM_146902.1	NM_146902.1		258904	22129082	NM_146902.1	Olfr1221	NP_667113.1	ILMN_1222921	001240075	S	745	TTCTTTGTTCCATGCATATTAATATATGCACGACCTTCATCTCCATTCTC	2	-	88951873-88951922	2qE1	Mus musculus olfactory receptor 1221 (Olfr1221), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR233-3	MOR233-3
Mus musculus	MEEBO	ILMN_219419	ILMN_219419	4930566N20RIK	scl11604.1.1_240	NM_183114.1			34147110	NM_183114.1	4930566N20Rik		ILMN_1232880	006770398	S	1045	CCCTGAGGGCGCTCTGAGTCCTGAGAATGTGACAACAGAAGCAACCATAG										
Mus musculus	RefSeq	ILMN_222179	ILMN_310092	A430076E10RIK	XR_035263.1	XR_035263.1		225770	149270228	XR_035263.1	A430076E10Rik		ILMN_2745827	003610017	S	569	AAACATGACTGTACTACCATCCTGTATCAAGCTAATAGATCAATATACTT	18	-	80738667-80738716	18qE3	PREDICTED: Mus musculus RIKEN cDNA A430076E10 gene (A430076E10Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_196321	ILMN_196321	CLEC4B1	NM_027218.2	NM_027218.2		69810	142368198	NM_027218.2	Clec4b1	NP_081494.1	ILMN_1213068	006350025	S	30	CCCTGAGTCATATCTTCAAGAGTCAGATACAAGAAACCATTGACCTGCAC	6	+	123000053-123000102	6qF2	Mus musculus C-type lectin domain family 4, member b1 (Clec4b1), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Clec4b; Aplra2; DCARbeta; 1810046I24Rik; DCAR; mDcar2	Clec4b; Aplra2; DCARbeta; 1810046I24Rik; DCAR; mDcar2
Mus musculus	RefSeq	ILMN_196321	ILMN_196321	CLEC4B1	NM_027218.2	NM_027218.2		69810	142368198	NM_027218.2	Clec4b1	NP_081494.1	ILMN_2603898	001230176	S	135	TCCCTGAGACTCTGGTCAGCTGCTGTGATTTCTATCTTACTCCTCAGCAC	6	+	123000646-123000695	6qF2	Mus musculus C-type lectin domain family 4, member b1 (Clec4b1), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Clec4b; Aplra2; DCARbeta; 1810046I24Rik; DCAR; mDcar2	Clec4b; Aplra2; DCARbeta; 1810046I24Rik; DCAR; mDcar2
Mus musculus	RefSeq	ILMN_221141	ILMN_229945	CTSQ	NM_029636.3	NM_029636.3		104002	133892435	NM_029636.3	Ctsq	NP_083912.2	ILMN_2776341	000010632	S	1134	CCACTCCAATGAACAGACTTTATTGACTATGTTAAACTCTTGAGTCCCAC	13	-	61136545-61136594	13qB2	Mus musculus cathepsin Q (Ctsq), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]			1600010J02Rik	1600010J02Rik
Mus musculus	RefSeq	ILMN_196065	ILMN_237017	MYO10	NM_019472.2	NM_019472.2		17909	130507684	NM_019472.2	Myo10	NP_062345.2	ILMN_2633678	004540703	S	6576	CGTATATCAGCATGATTGTGAAGAAGCGCTATAGCACCACACGCTCTGTG	15	+	25741904-25741953	15qB1	Mus musculus myosin X (Myo10), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	D15Ertd600e; mKIAA0799; AW048724	D15Ertd600e; mKIAA0799; AW048724
Mus musculus	RefSeq	ILMN_196065	ILMN_237017	MYO10	NM_019472.2	NM_019472.2		17909	130507684	NM_019472.2	Myo10	NP_062345.2	ILMN_1254035	005260593	S	519	TTCCGAGTACTGTAAATTCCTGTGCAGAAGGCGTCGTGGTCTTCCAGACA	15	+	25596218-25596267	15qB1	Mus musculus myosin X (Myo10), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	D15Ertd600e; mKIAA0799; AW048724	D15Ertd600e; mKIAA0799; AW048724
Mus musculus	RefSeq	ILMN_211172	ILMN_211172	KCNK12	NM_199251.1	NM_199251.1		210741	40445392	NM_199251.1	Kcnk12	NP_954859.1	ILMN_2613273	006060242	S	1755	ACAGAACGGCTTCTCGGGCGGCGTGGGCGCGCTGGGCATCATGAACAACC	17	-	88145308-88145357	17qE4	Mus musculus potassium channel, subfamily K, member 12 (Kcnk12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	mntk1	mntk1
Mus musculus	RefSeq	ILMN_242440	ILMN_242440	1700123D08RIK	NM_029687.1	NM_029687.1		76646	58037454	NM_029687.1	1700123D08Rik	NP_083963.1	ILMN_2863712	003460278	S	2506	GTGTCACAGCGCCCAGGCAGTGGAAAAGGAGGATCCGGAGTTCAAGCCTT	2	+	38827984-38828033	2qB	Mus musculus RIKEN cDNA 1700123D08 gene (1700123D08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187765	ILMN_231676	IGH-VS107	XM_973766.1	XM_973766.1		16065	94393643	XM_973766.1	Igh-VS107	XP_978860.1	ILMN_1223662	007650047	S	299	GGAAGAGACTGGAGTGGATTGCTGCAAGTAGAAACAAAGCTAATGATTAT					PREDICTED: Mus musculus immunoglobulin heavy chain (S107 family) (Igh-VS107), mRNA.					
Mus musculus	RefSeq	ILMN_210580	ILMN_233690	PDIA5	NM_028295.1	NM_028295.1		72599	30794139	NM_028295.1	Pdia5	NP_082571.1	ILMN_1255177	002900333	S	1395	AGGTCATCCCCCACTTCACTGCCACAGCCGATGCCTTCAAAGAGGACCGC	16	-	35404101-35404150	16qB3	Mus musculus protein disulfide isomerase associated 5 (Pdia5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [evidence IEA]	AU015525; Pdir; 2700053F16Rik	AU015525; Pdir; 2700053F16Rik
Mus musculus	RefSeq	ILMN_233690	ILMN_233690	PDIA5	NM_028295.1	NM_028295.1		72599	30794139	NM_028295.1	Pdia5	NP_082571.1	ILMN_2877787	005340041	S	1621	GGGAGACCTCAAGAGACTAGAGAAAAGGAGGGAAGAGCTGTAATCCCGCC	16	-	35397536-35397543:35397544-35397585	16qB3	Mus musculus protein disulfide isomerase associated 5 (Pdia5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [evidence IEA]	AU015525; Pdir; 2700053F16Rik	AU015525; Pdir; 2700053F16Rik
Mus musculus	RefSeq	ILMN_210580	ILMN_233690	PDIA5	NM_028295.1	NM_028295.1		72599	30794139	NM_028295.1	Pdia5	NP_082571.1	ILMN_2607066	006620717	S	948	CCGATGAAGACTTTGACCAGTTTGTGAAGGAGCACTCCTCTGTCCTCGTC	16	-	35422967-35423016	16qB3	Mus musculus protein disulfide isomerase associated 5 (Pdia5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [evidence IEA]	AU015525; Pdir; 2700053F16Rik	AU015525; Pdir; 2700053F16Rik
Mus musculus	RefSeq	ILMN_216017	ILMN_216017	CAPN12	NM_021894.1	NM_021894.1		60594	11230799	NM_021894.1	Capn12	NP_068694.1	ILMN_2666371	003780504	S	1388	GCTCCTTGGGGCATGAACAGAGATGCAGGGAGAAGATGACACCAGAGTCC	7	+	29678229-29678258:29678259-29678278	7qA3	Mus musculus calpain 12 (Capn12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209686	ILMN_209686	STK25	NM_021537.3	NM_021537.3		59041	89337276	NM_021537.3	Stk25	NP_067512.3	ILMN_2598239	000780110	S	1208	CCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGCTCTGCAC	1	-	95521622-95521671	1qD	Mus musculus serine/threonine kinase 25 (yeast) (Stk25), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	C86992; AU018434; Ste20-like; Ysk1; 1500019J11Rik	C86992; AU018434; Ste20-like; Ysk1; 1500019J11Rik
Mus musculus	RefSeq	ILMN_200486	ILMN_256720	GM1060	NM_001033460.2	NM_001033460.2		381738	142352196	NM_001033460.2	Gm1060	NP_001028632.1	ILMN_1234204	006040121	S	847	CCGCATGAAGAAGGTGGAGGACTACGAGAAGCAGCTCAACAAGCAGCGGG	5	+	30657533-30657560:30657894-30657915	5qB1	Mus musculus gene model 1060, (NCBI) (Gm1060), mRNA.					
Mus musculus	RefSeq	ILMN_221240	ILMN_221240	OGFOD2	NM_025671.1	NM_025671.1		66627	21313389	NM_025671.1	Ogfod2	NP_079947.1	ILMN_2732896	006510050	S	806	AGACCCTGGAAGTGGAGCATGTGGTGGGCTCTGGTATCCTGCACCGTGGC	5	+	124375352-124375401	5qF	Mus musculus 2-oxoglutarate and iron-dependent oxygenase domain containing 2 (Ogfod2), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]	1300006G11Rik; 5730405M13Rik; AU041636; AW552395	1300006G11Rik; 5730405M13Rik; AU041636; AW552395
Mus musculus	MEEBO	ILMN_195866	ILMN_195866	4733401H18RIK	scl35350.4_304				12963602	NM_023247	4733401H18Rik		ILMN_2519451	004480019	S	3	GCTCTGTCACAAATGAGACTATGCTATGAACATGTGTGATGGTGGGGACC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_241648	ILMN_241648	LOC433632	NM_001033779.1	NM_001033779.1		433632	85702088	NM_001033779.1	LOC433632	NP_001028951.1	ILMN_2992020	006350397	S	296	CAAGTCCAGGAGCCAACGTGCTGGAATTCATCTTGGGTCTCCTACTGAGG	3	+	98051828-98051877	3qF2.2	Mus musculus hypothetical LOC433632 (LOC433632), mRNA.					
Mus musculus	RefSeq	ILMN_215750	ILMN_215750	CCT4	NM_009837.1	NM_009837.1		12464	6753321	NM_009837.1	Cct4	NP_033967.1	ILMN_2663186	000670561	S	1823	GTACTGTGGCTGGAATGAAGGACAACCACCTTGTTCCTTGTCTGGAAGCT	11	+	22903193-22903242	11qA3.2	Mus musculus chaperonin containing Tcp1, subunit 4 (delta) (Cct4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A45; 2610204B21Rik; C78323; Cctd	A45; 2610204B21Rik; C78323; Cctd
Mus musculus	RefSeq	ILMN_220214	ILMN_220214	ZFAND6	NM_022985.3	NM_022985.3		65098	31340571	NM_022985.3	Zfand6	NP_075361.2	ILMN_2821501	003800735	S	1560	GTTCATTGGTCTGTGTTGCACAATATGAAGAATGAGCTGGTCATTGTGCG	7	-	84491287-84491336	7qD3	Mus musculus zinc finger, AN1-type domain 6 (Zfand6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Za20d3; Awp1; 3110005P07Rik	Za20d3; Awp1; 3110005P07Rik
Mus musculus	RefSeq	ILMN_223484	ILMN_223484	ANAPC11	NM_025389.3	NM_025389.3		66156	84039699	NM_025389.3	Anapc11	NP_079665.1	ILMN_1237597	000730471	S	2461	CAGAGTCTTCCACCGTGAGCACCACACCAAAACAACTCCAACCTTGTTGC	11	+	120468760-120468809	11qE2	Mus musculus anaphase promoting complex subunit 11 (Anapc11), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	R75218; 1110011I19Rik	R75218; 1110011I19Rik
Mus musculus	RefSeq	ILMN_215462	ILMN_320671	LOC100044158	XM_001471906.1	XM_001471906.1		100044158	149262644	XM_001471906.1	LOC100044158	XP_001471956.1	ILMN_1216280	004210102	S	358	GCCTACTTACAGATCGATAAGTCCTTCAAGGTTGAGGTGTTCGTGGTCCC					PREDICTED: Mus musculus hypothetical protein LOC100044158 (LOC100044158), mRNA.					
Mus musculus	RefSeq	ILMN_201153	ILMN_316949	LOC100047899	XM_001479088.1	XM_001479088.1		100047899	149259351	XM_001479088.1	LOC100047899	XP_001479138.1	ILMN_1212927	004850136	S	2505	ACGTCCAAATAATCTGCACATGTCTGCCTCTGTTGCAAGGAAGCGCCTCC					PREDICTED: Mus musculus similar to NF-180 (LOC100047899), mRNA.					
Mus musculus	RefSeq	ILMN_254643	ILMN_254643	RPS23	NM_024175.1	NM_024175.1		66475	13195603	NM_024175.1	Rps23	NP_077137.1	ILMN_2990715	007380373	S	434	AAGAAAGGCCAAGATCATAAAATTTGACAATGGAAACACAGTAATAAATT	13	+	91398904-91398922:91398923-91398953	13qC3	Mus musculus ribosomal protein S23 (Rps23), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	2410044J15Rik	2410044J15Rik
Mus musculus	RefSeq	ILMN_215304	ILMN_215304	CDC2A	NM_007659.3	NM_007659.3		12534	141803421	NM_007659.3	Cdc2a	NP_031685.2	ILMN_2657844	006060379	S	541	TTTCGGCCTTGCCAGAGCGTTTGGAATACCGATACGAGTGTACACACACG	10	-	68805289-68805338	10qB5.3	Mus musculus cell division cycle 2 homolog A (S. pombe) (Cdc2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A signal transduction-based surveillance mechanism that acts during a mitotic cell cycle to ensure accurate chromosome segregation by preventing entry into mitosis in the presence of damaged DNA [goid 7095] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [evidence IEA]; Interacting selectively with Hsp70 proteins, any of a group of heat shock proteins around 70kDa in size [goid 30544] [evidence IPI]	Cdc2; CDK1; p34<CDC2>	Cdc2; CDK1; p34<CDC2>
Mus musculus	RefSeq	ILMN_215304	ILMN_215304	CDC2A	NM_007659.3	NM_007659.3		12534	141803421	NM_007659.3	Cdc2a	NP_031685.2	ILMN_2698252	002750026	S	2538	CCCAGATCTCTGTTGGGAAGTAACTGGGTAACAAAAGCCGTTGCACTGGT	10	-	68799655-68799704	10qB5.3	Mus musculus cell division cycle 2 homolog A (S. pombe) (Cdc2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A signal transduction-based surveillance mechanism that acts during a mitotic cell cycle to ensure accurate chromosome segregation by preventing entry into mitosis in the presence of damaged DNA [goid 7095] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [evidence IEA]; Interacting selectively with Hsp70 proteins, any of a group of heat shock proteins around 70kDa in size [goid 30544] [evidence IPI]	Cdc2; CDK1; p34<CDC2>	Cdc2; CDK1; p34<CDC2>
Mus musculus	MEEBO	ILMN_219147	ILMN_219147	PLA1A	scl48484.12.1_8				31982574	NM_134102	Pla1a		ILMN_1224786	005910092	S	866	CAGCCTGGAGGAACGCTTGGATGCTGGAGACGCCCTGTTTGTAGAAGCCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222458	ILMN_222458	SLC15A1	NM_053079.2	NM_053079.2		56643	119392091	NM_053079.2	Slc15a1	NP_444309.2	ILMN_2943040	002650475	S	2165	GGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTC	14	-	121859751-121859800	14qE5	Mus musculus solute carrier family 15 (oligopeptide transporter), member 1 (Slc15a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Catalysis of the transfer of a oligopeptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement [goid 5427] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	PEPT1; D630032F02; PECT1	PEPT1; D630032F02; PECT1
Mus musculus	RefSeq	ILMN_197227	ILMN_229347	LOC639450	XM_915884.2	XM_915884.2		639450	149249186	XM_915884.2	LOC639450	XP_920977.2	ILMN_1225910	005340360	S	444	AGCATTAGCAAACACGGATAGCTACCTGCTGGCCTCCATGGCCATTGATC					PREDICTED: Mus musculus similar to olfactory receptor 364 (LOC639450), mRNA.					
Mus musculus	RefSeq	ILMN_197218	ILMN_197218	LOC381362	XM_355328.1	XM_355328.1			38074636	XM_355328.1	LOC381362		ILMN_2527335	004920367	S	841	GCCAGTGCTGGTTACTCTCGTACGGTCAAAGTCTGGGACTGCCTCACAGG										
Mus musculus	RefSeq	ILMN_238460	ILMN_238460	OLFR487	NM_001011811.1	NM_001011811.1		258042	58801387	NM_001011811.1	Olfr487	NP_001011811.1	ILMN_3160393	006940358	S	686	TGAAGATGCACTCCACTGAGGGTCGCCAAAAAGCCTTCTCCACCTGCATG	7	-	115355306-115355355	7qE3	Mus musculus olfactory receptor 487 (Olfr487), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR204-29P	MOR204-29P
Mus musculus	RefSeq	ILMN_193278	ILMN_231800	CLIP2	NM_009990.2	NM_009990.2		269713	85662409	NM_009990.2	Clip2	NP_034120.2	ILMN_2698400	002970739	S	1853	TGGAGCACGCGCGCATTGGGGAGCTGGAGCAGAGCCTGCTATTGGAGAAG	5	-	134998806-134998855	5qG2	Mus musculus CAP-GLY domain containing linker protein 2 (Clip2), transcript variant 1, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CLIP-115; Clip1; B230327O20; WSCR4; Cyln2; mKIAA0291; wbscr4	CLIP-115; Clip1; B230327O20; WSCR4; Cyln2; mKIAA0291; wbscr4
Mus musculus	MEEBO	ILMN_189368	ILMN_189368	4833426I10RIK	scl074592.1_78						4833426I10Rik		ILMN_1259512	000060739	S	4	GGTCTGACTCCCTTTATATGAGCCTATGCCCCTTCTTTCTAGATAGCTTC										
Mus musculus	MEEBO	ILMN_220226	ILMN_220226	KCNJ10	scl17206.2_153	NM_020269.3			34328497	NM_020269.3	Kcnj10		ILMN_2719397	005270521	S	1852	TGGGGTTGACTCGAGAAACACAAGCAGCCACCTTTCCTGCACCCATCCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5242] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214894	ILMN_235492	LOC626583	XM_988307.1	XM_988307.1		626583	94377682	XM_988307.1	LOC626583	XP_993401.1	ILMN_1213431	001260634	S	115	GCCACCATCTCCTGCAGAGCCAGCGAAAGTGTTGATAATTATGGCATTAG				6qC1	PREDICTED: Mus musculus similar to Ig kappa chain V-III region PC 7132 (LOC626583), mRNA.					
Mus musculus	RefSeq	ILMN_196901	ILMN_315113	LOC100045262	XM_001473948.1	XM_001473948.1		100045262	149233980	XM_001473948.1	LOC100045262	XP_001473998.1	ILMN_1241939	006560491	S	11792	GACGACCAAGTTACGTTGCTCCACTGTATAAGACAAGCGAGAGGAGGGGC					PREDICTED: Mus musculus similar to KIAA0944 protein (LOC100045262), mRNA.					
Mus musculus	Riken	ILMN_207080	ILMN_207080	B930078G14RIK	ri|B930078G14|PX00665M20|AK081065|1536					AK081065	B930078G14Rik		ILMN_1243567	003520292	S	1239	GCCCCAGGGCTTACTCTCTTTCCCAAAGGGCCCACCTTTTAATGCTGAAA										
Mus musculus	RefSeq	ILMN_222700	ILMN_222700	IRAK3	NM_028679.3	NM_028679.3		73914	142380077	NM_028679.3	Irak3	NP_082955.2	ILMN_1253972	001030497	S	2820	GGAAGTGAGCCAAGTCATCCTTGCTAGGGCTTTTTCTGTGTAGAGAGGGA	10	-	119578809-119578858	10qD2	Mus musculus interleukin-1 receptor-associated kinase 3 (Irak3), mRNA.		Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components [goid 43244] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]	4833428C18Rik; AI563835; IRAK-M	4833428C18Rik; AI563835; IRAK-M
Mus musculus	MEEBO	ILMN_186380	ILMN_186380	SCL000034.1_162_REVCOMP	scl000034.1_162_REVCOMP						scl000034.1_162_REVCOMP		ILMN_2435044	004610176	S	19	ATTTTTTCCTTTTATACAGGTGGACATCGAAGTGGACCTAATTCGCTTTT										
Mus musculus	RefSeq	ILMN_196345	ILMN_196345	4921518A06RIK	NM_198293.1	NM_198293.1			38142467	NM_198293.1	4921518A06Rik		ILMN_2618447	001710465	S	636	GTATGCCGCCAAGGATGGGACTTCCAGCTAATGAATTTGTACATGCAGCC										
Mus musculus	RefSeq	ILMN_196345	ILMN_196345	4921518A06RIK	NM_198293.1	NM_198293.1			38142467	NM_198293.1	4921518A06Rik		ILMN_1226521	004180202	S	619	CAGACTTTACGATCCCTGTATGCCGCCAAGGATGGGACTTCCAGCTAATG										
Mus musculus	RefSeq	ILMN_196345	ILMN_196345	4921518A06RIK	NM_198293.1	NM_198293.1			38142467	NM_198293.1	4921518A06Rik		ILMN_2623325	004010615	S	1203	GTACAAGAAAAGGGGTCCCCAGGCACTCTGGTGGAGCGAATACTGCAATA										
Mus musculus	RefSeq	ILMN_224161	ILMN_257604	DUSP12	NM_023173.2	NM_023173.2		80915	70778929	NM_023173.2	Dusp12	NP_075662.2	ILMN_2775813	001110246	S	1294	CATATATACAGTTACGTTGCTTGGCAATTCAGATATTTAGTTATGTAAGT	1	-	172804349-172804398	1qH3	Mus musculus dual specificity phosphatase 12 (Dusp12), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence ISS]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	MGC117646; AA027408; AW049275; T-DSP4; VH1; 1190004O14Rik; ESTM36; mVH1; LMW-DSP4	MGC117646; AA027408; AW049275; T-DSP4; VH1; 1190004O14Rik; ESTM36; mVH1; LMW-DSP4
Mus musculus	RefSeq	ILMN_219513	ILMN_219513	CLDN1	NM_016674.2	NM_016674.2		12737	31542403	NM_016674.2	Cldn1	NP_057883.1	ILMN_2870295	003450300	S	2388	CTTGTCCTGCCTATGTTGCATGAGTCAAGAGGGGGCACAGGCTAACATGG	16	-	26272798-26272847	16qB2	Mus musculus claudin 1 (Cldn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence IDA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI596271	AI596271
Mus musculus	RefSeq	ILMN_216533	ILMN_216533	GNAT1	NM_008140.2	NM_008140.2		14685	31542897	NM_008140.2	Gnat1	NP_032166.1	ILMN_1260029	006590632	S	1815	CTGGTCAAGGTATGCTGTATTGAAGGAGGGTATTATTGACATAGCTATGA	9	-	107577148-107577197	9qF1	Mus musculus guanine nucleotide binding protein, alpha transducing 1 (Gnat1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IC ]; A 9+0 cilium that forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments [goid 32391] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events involved in visual perception in which a sensory light stimulus is received by a cell and converted into a molecular signal [goid 50908] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates [goid 50917] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of guanylyl cyclase and a subsequent increase in the concentration of cyclic GMP [goid 7199] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with a complex of G-protein beta/gamma subunits [goid 31683] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]	Gnat-1; transducin; Tralpha	Gnat-1; transducin; Tralpha
Mus musculus	RefSeq	ILMN_216533	ILMN_216533	GNAT1	NM_008140.2	NM_008140.2		14685	31542897	NM_008140.2	Gnat1	NP_032166.1	ILMN_2765547	001780594	S	2140	GCAAGACTAGGGCACAACCTCTCCCTCCCTTAGCTAGCTGCAGACTCAGC	9	-	107576823-107576872	9qF1	Mus musculus guanine nucleotide binding protein, alpha transducing 1 (Gnat1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IC ]; A 9+0 cilium that forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments [goid 32391] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events involved in visual perception in which a sensory light stimulus is received by a cell and converted into a molecular signal [goid 50908] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates [goid 50917] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of guanylyl cyclase and a subsequent increase in the concentration of cyclic GMP [goid 7199] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with a complex of G-protein beta/gamma subunits [goid 31683] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]	Gnat-1; transducin; Tralpha	Gnat-1; transducin; Tralpha
Mus musculus	RefSeq	ILMN_224039	ILMN_251310	IGBP1B	NM_015777.2	NM_015777.2		50540	113866006	NM_015777.2	Igbp1b	NP_056592.2	ILMN_2773598	001190142	S	1214	CCGGTGCTCTGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCT	6	-	138605702-138605751	6qG1	Mus musculus immunoglobulin (CD79A) binding protein 1b (Igbp1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism [goid 9607] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19208] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	alpha4-b	alpha4-b
Mus musculus	RefSeq	ILMN_197200	ILMN_224353	GM757	NM_001033410.2	NM_001033410.2		329360	141803138	NM_001033410.2	Gm757	NP_001028582.1	ILMN_1229324	004010484	S	386	CGTGGAGGGGTGACCATGTTGGACCTGGACCTGGCTGCCTTCTTGGCAGT	2	-	25091581-25091630	2qA3	Mus musculus gene model 757, (NCBI) (Gm757), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210839	ILMN_210839	PDRG1	NM_178939.2	NM_178939.2		68559	118130583	NM_178939.2	Pdrg1	NP_849270.1	ILMN_1249417	007400519	S	870	TAAAGCAGGACACTGACCGTTCACTTCTGCGTGAAGCAGACCTAGTGCTC	2	-	152834935-152834984	2qH1	Mus musculus p53 and DNA damage regulated 1 (Pdrg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	Pdrg; AU020945; AV006589; 1110004D19Rik	Pdrg; AU020945; AV006589; 1110004D19Rik
Mus musculus	RefSeq	ILMN_244126	ILMN_244126	GUCY1A2	NM_001033322.1	NM_001033322.1		234889	109659842	NM_001033322.1	Gucy1a2	NP_001028494.1	ILMN_2895501	000150327	S	2281	TGCGGATAGGCATTCACTCAGGCTCTGTGCTGGCTGGTGTGGTCGGAGTA	9	+	3865359-3865408	9qA1	Mus musculus guanylate cyclase 1, soluble, alpha 2 (Gucy1a2), mRNA. XM_972907		Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP [goid 30828] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	9430053E15	9430053E15
Mus musculus	RefSeq	ILMN_209958	ILMN_209958	TMEM139	NM_175408.4	NM_175408.4		109218	148352317	NM_175408.4	Tmem139	NP_780617.2	ILMN_2600822	000150176	S	735	CCTGTGCACTCATTTGCCCAGCATTTCCTAGTGTCTATTGGATCAGAAAC				6qB2.1	Mus musculus transmembrane protein 139 (Tmem139), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			A930027H06Rik	A930027H06Rik
Mus musculus	MEEBO	ILMN_196003	ILMN_196003	A230048G03RIK	scl49607.1.5_206				51770407	XM_283480	A230048G03Rik		ILMN_2520727	003140278	S	2	CATGTAGTTGAGTGGCCATTGGTTAGTATCAGGAAAAGAAAATGGGTCAA										
Mus musculus	RefSeq	ILMN_244613	ILMN_244613	CILP2	NM_026818.1	NM_026818.1		68709	110350655	NM_026818.1	Cilp2	NP_081094.1	ILMN_2963720	001500427	S	3703	CTGGAGAACCCTTCATCAGCGCTTGGCGACATCCGTAGGGAGATGGGCCA	8	-	72404829-72404878	8qB3.3	Mus musculus cartilage intermediate layer protein 2 (Cilp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110031K21Rik; AA407300; CLIP-2	1110031K21Rik; AA407300; CLIP-2
Mus musculus	RefSeq	ILMN_184764	ILMN_238825	A730035I17RIK	NM_029947.2	NM_029947.2		77630	110347526	NM_029947.2	A730035I17Rik	NP_084223.2	ILMN_2747598	000580739	S	2698	TGATGCATTTGTCATACGTTTCTACTTAAATTATTAAGCACTTATGGTTT	5	+	98616046-98616095	5qE3	Mus musculus RIKEN cDNA A730035I17 gene (A730035I17Rik), mRNA.				4930565F05Rik; PFM5	4930565F05Rik; PFM5
Mus musculus	RefSeq	ILMN_238825	ILMN_238825	A730035I17RIK	NM_029947.2	NM_029947.2		77630	110347526	NM_029947.2	A730035I17Rik	NP_084223.2	ILMN_3133489	003390400	A	2407	CTTATGCCCCCAAACACTGCAACCAAACACGTGCACACACAGGTCCCTCC	5	+	98615755-98615804	5qE3	Mus musculus RIKEN cDNA A730035I17 gene (A730035I17Rik), mRNA.				4930565F05Rik; PFM5	4930565F05Rik; PFM5
Mus musculus	RefSeq	ILMN_238825	ILMN_238825	A730035I17RIK	NM_029947.2	NM_029947.2		77630	110347526	NM_029947.2	A730035I17Rik	NP_084223.2	ILMN_3056561	006580692	I	928	AAGTTCTGCAAAGCCGGCCCCATACACCACTACCCCGCGTCATCCCCGGA	5	+	98614276-98614325	5qE3	Mus musculus RIKEN cDNA A730035I17 gene (A730035I17Rik), mRNA.				4930565F05Rik; PFM5	4930565F05Rik; PFM5
Mus musculus	MEEBO	ILMN_188969	ILMN_188969	1200015N20RIK	scl38792.14_646				31343632	NM_024244	1200015N20Rik		ILMN_2591158	002340592	S	3004	AGACTATGTCAGAGGCGTGTTGTTCTCTCTGTATTCACCTGCTGTTTATG										
Mus musculus	RefSeq	ILMN_195166	ILMN_312568	LOC100048116	XM_001479554.1	XM_001479554.1		100048116	149274538	XM_001479554.1	LOC100048116	XP_001479604.1	ILMN_1242872	004180192	S	1018	GCAGCTGAGCTCCAGATCCTCTCTGTAAACTTGCACTGTTTGATTCCTCA					PREDICTED: Mus musculus similar to Jmy-pending protein (LOC100048116), mRNA.					
Mus musculus	Riken	ILMN_203652	ILMN_203652	9430022L01RIK	ri|9430022L01|PX00108E15|AK034668|2772					AK034668	9430022L01Rik		ILMN_1216488	002750373	S	2564	ACAAAACTCAGGCTTCCTCAAACTCAGGGTCCTTCTGCTTCAGCCTCTGC										
Mus musculus	RefSeq	ILMN_211289	ILMN_211289	BMPR2	NM_007561.1	NM_007561.1		12168	6680803	NM_007561.1	Bmpr2	NP_031587.1	ILMN_2768587	000630092	S	3135	TGTTTTCAAGCTTATGGAGTGAAATTATTTTTTTGCATCATTTAAACATG	1	+	59815033-59815082	1qC1.3	Mus musculus bone morphogenic protein receptor, type II (serine/threonine kinase) (Bmpr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The process that modulates the force with which blood travels through the lungs. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 14916] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence ISO]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence ISO]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vasoconstriction [goid 45906] [evidence IMP]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2610024H22Rik; AL117858; AW546137; BMPR-II; BMP-2; BB189135	2610024H22Rik; AL117858; AW546137; BMPR-II; BMP-2; BB189135
Mus musculus	RefSeq	ILMN_211289	ILMN_211289	BMPR2	NM_007561.1	NM_007561.1		12168	6680803	NM_007561.1	Bmpr2	NP_031587.1	ILMN_2614322	002630161	S	2761	CTTACACAAGGTGTTACAAGCACAGCTGCAGATCCTGGGCCATCAAAGCC	1	+	59813040-59813089	1qC1.3	Mus musculus bone morphogenic protein receptor, type II (serine/threonine kinase) (Bmpr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The process that modulates the force with which blood travels through the lungs. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 14916] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence ISO]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence ISO]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vasoconstriction [goid 45906] [evidence IMP]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2610024H22Rik; AL117858; AW546137; BMPR-II; BMP-2; BB189135	2610024H22Rik; AL117858; AW546137; BMPR-II; BMP-2; BB189135
Mus musculus	RefSeq	ILMN_210965	ILMN_210965	SASH1	NM_175155.4	NM_175155.4		70097	112821669	NM_175155.4	Sash1	NP_780364.3	ILMN_1246459	004490537	S	7109	TCCTGTGTATCAAAACTTGTCTATAATTATGTCACCTATGTACCTAGGGG	10	-	8442041-8442090	10qA1	Mus musculus SAM and SH3 domain containing 1 (Sash1), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		1100001C18Rik; 2500002E12Rik; A330076K04Rik; mKIAA0790	1100001C18Rik; 2500002E12Rik; A330076K04Rik; mKIAA0790
Mus musculus	MEEBO	ILMN_215725	ILMN_215725	SLN	scl36944.2_280	NM_025540.1			13384961	NM_025540.1	Sln		ILMN_2662878	004120041	S	942	CCAGAGGAAGAATAATTCCATCCTGCAGAAGGGTTGGGTCAGAGCCCAGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]		Modulates the activity of an enzyme [goid 30234] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213246	ILMN_213246	OLFR461	NM_146382.1	NM_146382.1		258380	22129540	NM_146382.1	Olfr461	NP_666494.1	ILMN_2635145	003420367	S	590	TTCTGTTTTTAATGGCTGTTTTCATTATTGTTGGTTCCATGATCCTTACA	6	-	40494337-40494386	6qB1	Mus musculus olfactory receptor 461 (Olfr461), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR120-3	MOR120-3
Mus musculus	RefSeq	ILMN_211215	ILMN_211215	ACE	NM_207624.4	NM_207624.4		11421	145386586	NM_207624.4	Ace	NP_997507.1	ILMN_2613683	004890706	S	1909	TCCTAGGCTGGCCAGAGAATCAGTGGCGTCCACCGTTACCCGACAACTAT				11qE1	Mus musculus angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 (Ace), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42447] [evidence IDA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IDA]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the release of C-terminal dipeptides from a polypeptide chain [goid 8241] [evidence IDA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	AW208573; MGC117827; CD143	AW208573; MGC117827; CD143
Mus musculus	RefSeq	ILMN_185088	ILMN_211215	ACE	NM_207624.4	NM_207624.4		11421	145386586	NM_207624.4	Ace	NP_997507.1	ILMN_2424060	005360674	S	4749	CCCTCAGCCTCAGCCATCCTTTGGAAGGCCTATTTGGATTTTAGGGGGTG				11qE1	Mus musculus angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 (Ace), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42447] [evidence IDA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IDA]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the release of C-terminal dipeptides from a polypeptide chain [goid 8241] [evidence IDA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	AW208573; MGC117827; CD143	AW208573; MGC117827; CD143
Mus musculus	RefSeq	ILMN_200976	ILMN_248181	6430531B16RIK	NM_001033465.2	NM_001033465.2		381933	142360518	NM_001033465.2	6430531B16Rik	NP_001028637.1	ILMN_2540671	003460204	S	186	TGGCTCGGGACTTCAGTGATGGTGTGCTGGTGGCCGAGATTGTGAAGCAC	7	-	147164018-147164044:147164446-147164468	7qF4	Mus musculus RIKEN cDNA 6430531B16 gene (6430531B16Rik), mRNA.				Gm1093	Gm1093
Mus musculus	RefSeq	ILMN_201416	ILMN_201416	LOC385128	XM_358074.1	XM_358074.1			38093588	XM_358074.1	LOC385128		ILMN_1241385	006280673	S	515	TGTCCCGGGCGCACCGAGGTTCACGACAGGTAACACGTGGCCTTTGTGCA										
Mus musculus	RefSeq	ILMN_195495	ILMN_248947	MLLT10	NM_010804.3	NM_010804.3		17354	118130146	NM_010804.3	Mllt10	NP_034934.2	ILMN_2630536	004260678	S	2781	GTGTCCGCAGTGGGTGGAATAATTGGAGCTCTGCCAGGTAACCAACTGGC	2	+	18128584-18128633	2qA3	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (Mllt10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA4140; mKIAA4140; D630001B22Rik; B130021D15Rik; Af10	KIAA4140; mKIAA4140; D630001B22Rik; B130021D15Rik; Af10
Mus musculus	RefSeq	ILMN_195495	ILMN_248947	MLLT10	NM_010804.3	NM_010804.3		17354	118130146	NM_010804.3	Mllt10	NP_034934.2	ILMN_1213638	004040402	S	4737	ATTTTATATATGTAACCCACTGGTTGTTATTCTGTAACAATTTGTATAAA	2	+	18133868-18133917	2qA3	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (Mllt10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA4140; mKIAA4140; D630001B22Rik; B130021D15Rik; Af10	KIAA4140; mKIAA4140; D630001B22Rik; B130021D15Rik; Af10
Mus musculus	Riken	ILMN_203540	ILMN_203540	CLCN4-2	ri|E430012I17|PX00098F21|AK088317|3859					AK088317	Clcn4-2		ILMN_1215984	002630468	S	3330	CTCCTTTTTGAGATTCTGAGATGCTGCATGTGGGCAAGTGGGGGTAGCGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210388	ILMN_210388	EYA3	NM_010166.2	NM_010166.2		14050	46877073	NM_010166.2	Eya3	NP_034296.2	ILMN_2761966	004290168	S	5050	CAGGAAAAGGCATCCATGGGTGGGATATATATATTTATGTGACTGCGGGC	4	+	132280541-132280590	4qD2.3	Mus musculus eyes absent 3 homolog (Drosophila) (Eya3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]	AI844637	AI844637
Mus musculus	RefSeq	ILMN_210388	ILMN_210388	EYA3	NM_010166.2	NM_010166.2		14050	46877073	NM_010166.2	Eya3	NP_034296.2	ILMN_3089834	005220181	A	4837	CGTTCTGAGCTTCCCAAACATCTAAACCACGAGGGGGAGAACCCCGCTTG	4	+	132280328-132280377	4qD2.3	Mus musculus eyes absent 3 homolog (Drosophila) (Eya3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]	AI844637	AI844637
Mus musculus	MEEBO	ILMN_184840	ILMN_184840	AKAP1	scl0001272.1_2				40675749	BC065135	Akap1		ILMN_2422036	007040414	S	8	CCCGGCCTGGGCTAGCACGTGGGGGAGCGGCCGAAGCGCCGTGCAGCGCT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	Riken	ILMN_201802	ILMN_201802	CBLC	ri|2310076I21|ZX00060A11|AK010200|1057					AK010200	Cblc		ILMN_1235566	006770437	S	953	GCCGGTGGTTTTCCCGTAATTTCAGCACTTGGGAGGTGGAGGCTGGAGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence ISO]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISO]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192673	ILMN_192673	SPRED1	scl20455.7_430				51036620	NM_033524	Spred1		ILMN_2490252	005900204	S	4	AGCCCGCTTAACTCCTGTCCTAATGCATCTTCTCACATAGAGCTGACTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IMP]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_202524	ILMN_202524	3830425H19RIK	ri|3830425H19|PX00093E23|AK014453|1548					AK014453	3830425H19Rik		ILMN_1238079	001260240	S	606	CACCCACATGATGGCTCACAGTGCTTTGGGACTCCAGTTCAGGACACCTG										
Mus musculus	RefSeq	ILMN_209663	ILMN_209663	MBOAT1	NM_153546.3	NM_153546.3		218121	146149183	NM_153546.3	Mboat1	NP_705774.1	ILMN_1225029	002450088	S	2513	GTCGATGATCACGGCCAACGTGTAGACACTAGGTAACGTCTGTAACGGGC				13qA3.2	Mus musculus membrane bound O-acyltransferase domain containing 1 (Mboat1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	Oact1; MGC38410; RP23-195A2.1; Moact1; BC023845; 9130215M02Rik	Oact1; MGC38410; RP23-195A2.1; Moact1; BC023845; 9130215M02Rik
Mus musculus	RefSeq	ILMN_193588	ILMN_258987	OLFR53	NM_146960.1	NM_146960.1		258962	22129006	NM_146960.1	Olfr53	NP_667171.1	ILMN_2498577	006840398	S	609	GGCAGATGTCTTTCTGGGAGGCATCAACTTCATGTTAACCCTGTTATCTT	7	+	147838488-147838537	7qF5	Mus musculus olfactory receptor 53 (Olfr53), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR253-5; IE12	MOR253-5; IE12
Mus musculus	RefSeq	ILMN_188597	ILMN_313286	LOC100044122	XM_001474594.1	XM_001474594.1		100044122	149258312	XM_001474594.1	LOC100044122	XP_001474644.1	ILMN_2777879	004480048	S	1031	ACCATCAGGGAACGTGCAGGGCAAGACAGGCCCGGCCCACACTAACTGCA	7	+	150607419-150607468		PREDICTED: Mus musculus similar to Potassium voltage-gated channel, subfamily Q, member 1 (LOC100044122), mRNA.					
Mus musculus	MEEBO	ILMN_192830	ILMN_192830	SCL0001644.1_2	scl0001644.1_2	XM_355003.1			38082138	XM_355003.1	scl0001644.1_2		ILMN_2491705	006860487	S	6	CCAGCTTCAGCAGATAATGCGTCTGACGGGGACACCCCCTGCTTATCTCA										
Mus musculus	RefSeq	ILMN_200961	ILMN_226090	LOC638031	XM_913899.3	XM_913899.3		638031	149258063	XM_913899.3	LOC638031	XP_918992.3	ILMN_1217681	003870575	S	429	GTCTTCGAGAAGGTGAAAGAAGGCATGAACACTGTGGAAGCCATGGAGCA					PREDICTED: Mus musculus similar to peptidylprolyl isomerase A (LOC638031), mRNA.					
Mus musculus	RefSeq	ILMN_200124	ILMN_200124	LOC384228	XM_357505.1	XM_357505.1			38080510	XM_357505.1	LOC384228		ILMN_1254038	000160113	S	997	CAGCGAGAACCTAAGGGAACACTGCTGACAAAGACGCTGGGCCAAAGAGG										
Mus musculus	MEEBO	ILMN_187988	ILMN_187988	ANKRD28	scl0105522.1_134				51768304	XM_127673	Ankrd28		ILMN_1237359	004250746	S	9	GGTGGGTCGGTTGTGTATTTATCCTCGCCCACAAGGGGAAAGTCTGTCGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_189646	ILMN_189646	UBE2D2	NM_019912.1	NM_019912.1		56550	9910599	NM_019912.1	Ube2d2	NP_064296.1	ILMN_1215117	006060451	S	2294	AATGTAAGCCAGGCCAGCTTGAAGGCCAATGCTCTTTAGTCACCAAGATC	18	+	35966685-35966734	18qB2	Mus musculus ubiquitin-conjugating enzyme E2D 2 (Ube2d2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	ubc4; 1500034D03Rik; Ubc2e	ubc4; 1500034D03Rik; Ubc2e
Mus musculus	RefSeq	ILMN_200356	ILMN_200356	LOC386288	XM_359160.1	XM_359160.1			38081406	XM_359160.1	LOC386288		ILMN_1257784	000630241	S	999	CCATGACAAAACCAAATTCACACAATATCTTTCCACGAATCCAGCCCTTC										
Mus musculus	RefSeq	ILMN_218003	ILMN_218003	SPRR4	NM_173070.1	NM_173070.1		229562	27414498	NM_173070.1	Sprr4	NP_775093.1	ILMN_1241257	006270719	S	95	GTCAAGAGGCATGTGTGCCTAAAACCAAGGATCCATGTGTTCCTCAGGCC	3	-	92304271-92304320	3qF1	Mus musculus small proline-rich protein 4 (Sprr4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC129389	MGC129389
Mus musculus	RefSeq	ILMN_209948	ILMN_312172	LOC100044696	XM_001473268.1	XM_001473268.1		100044696	149265189	XM_001473268.1	LOC100044696	XP_001473318.1	ILMN_2600729	000540044	S	1978	CGTGAAAAGCTTCATTAAATGGTGCAACTCTGGATCCCAAGAGGAAGGGT					PREDICTED: Mus musculus similar to cysteine-rich PAK1inhibitor (LOC100044696), mRNA.					
Mus musculus	MEEBO	ILMN_219479	ILMN_219479	C230060E24	scl18827.10.1_102				51706320	XM_488955	C230060E24		ILMN_1238039	000240241	S	3285	GCCTGTGACTGTGTAGTTAGGCTCAAGTGTGTATCATCCGCCCTCCAACC										
Mus musculus	RefSeq	ILMN_190272	ILMN_190272	WNT2	NM_023653.4	NM_023653.4		22413	142373092	NM_023653.4	Wnt2	NP_076142.2	ILMN_1258734	004830008	S	1651	GATAGCTGTTGATAGCATCCTTGGTGACTTTCTAGAGAAAGATGGCTTCC	6	-	17958717-17958766	6qA2	Mus musculus wingless-related MMTV integration site 2 (Wnt2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	Wnt-2; Irp; m-irp; 2610510E18Rik; Mirp; Int1l1; Wnt2a	Wnt-2; Irp; m-irp; 2610510E18Rik; Mirp; Int1l1; Wnt2a
Mus musculus	RefSeq	ILMN_218931	ILMN_218931	PLD3	NM_011116.1	NM_011116.1		18807	7242180	NM_011116.1	Pld3	NP_035246.1	ILMN_2702101	006110037	S	1538	CCTTCCTGCTCTCCCTGGCTGCACTTCATGACAACCATACTCACTCCGAC	7	-	28318673-28318722	7qA3	Mus musculus phospholipase D family, member 3 (Pld3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Sam-9	Sam-9
Mus musculus	RefSeq	ILMN_218931	ILMN_218931	PLD3	NM_011116.1	NM_011116.1		18807	7242180	NM_011116.1	Pld3	NP_035246.1	ILMN_2784950	001500722	S	1880	TTTGAGGCTCAGCCCGACGGACAGGTCAAAGCCTTCCAGGCCTCCTTGGA	7	-	28317271-28317316:28317317-28317320	7qA3	Mus musculus phospholipase D family, member 3 (Pld3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Sam-9	Sam-9
Mus musculus	Riken	ILMN_205610	ILMN_205610	NFIB	ri|B930092H13|PX00166H17|AK047576|3836					AK047576	Nfib		ILMN_2573881	004180288	S	3065	CAGCTGTCTCAGAGGCGACATTGTAAGGTGGGCTACATGCATGTGTTAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192467	ILMN_212979	TBC1D2	NM_198664.3	NM_198664.3		381605	111038125	NM_198664.3	Tbc1d2	NP_941066.3	ILMN_1255614	000830551	S	2682	CTACCAGTACCTGCGTTTCTTCACCAAGACCATCTGCGACAGCCGGAAGC	4	-	46618835-46618840:46619255-46619298	4qB1	Mus musculus TBC1 domain family, member 2 (Tbc1d2), mRNA.				RP23-117B19.7; PARIS1; PARIS-1; A630005A06Rik; Gm1037; BC022630	RP23-117B19.7; PARIS1; PARIS-1; A630005A06Rik; Gm1037; BC022630
Mus musculus	RefSeq	ILMN_212979	ILMN_212979	TBC1D2	NM_198664.3	NM_198664.3		381605	111038125	NM_198664.3	Tbc1d2	NP_941066.3	ILMN_3063153	005550482	I	677	AAGAGGAGGCCGAGCTGGAGGAGTTCCTGTGCCCTGTGAAAACACCCACT	4	-	46650555-46650604	4qB1	Mus musculus TBC1 domain family, member 2 (Tbc1d2), mRNA.				RP23-117B19.7; PARIS1; PARIS-1; A630005A06Rik; Gm1037; BC022630	RP23-117B19.7; PARIS1; PARIS-1; A630005A06Rik; Gm1037; BC022630
Mus musculus	RefSeq	ILMN_212979	ILMN_212979	TBC1D2	NM_198664.3	NM_198664.3		381605	111038125	NM_198664.3	Tbc1d2	NP_941066.3	ILMN_3140913	005690343	A	4205	GGAGTCAGGTGTGGGGTACACACTTCAGATCCCAGCAGTTCCAACACTGG	4	-	46617312-46617361	4qB1	Mus musculus TBC1 domain family, member 2 (Tbc1d2), mRNA.				RP23-117B19.7; PARIS1; PARIS-1; A630005A06Rik; Gm1037; BC022630	RP23-117B19.7; PARIS1; PARIS-1; A630005A06Rik; Gm1037; BC022630
Mus musculus	RefSeq	ILMN_212979	ILMN_212979	TBC1D2	NM_198664.3	NM_198664.3		381605	111038125	NM_198664.3	Tbc1d2	NP_941066.3	ILMN_1249082	003520762	S	327	CGGCAAAGGACCCATCAAGGGCTGGAAATGCCGCTGGTTCTTCTACGATG	4	-	46662695-46662744	4qB1	Mus musculus TBC1 domain family, member 2 (Tbc1d2), mRNA.				RP23-117B19.7; PARIS1; PARIS-1; A630005A06Rik; Gm1037; BC022630	RP23-117B19.7; PARIS1; PARIS-1; A630005A06Rik; Gm1037; BC022630
Mus musculus	RefSeq	ILMN_192467	ILMN_212979	TBC1D2	NM_198664.3	NM_198664.3		381605	111038125	NM_198664.3	Tbc1d2	NP_941066.3	ILMN_1250612	002480427	S	4065	TCCAGCCCTGAACGAGCAGGCCAAGCTCCAGTAACAGGACTCAGAGAACT	4	-	46617452-46617501	4qB1	Mus musculus TBC1 domain family, member 2 (Tbc1d2), mRNA.				RP23-117B19.7; PARIS1; PARIS-1; A630005A06Rik; Gm1037; BC022630	RP23-117B19.7; PARIS1; PARIS-1; A630005A06Rik; Gm1037; BC022630
Mus musculus	MEEBO	ILMN_191534	ILMN_191534	SCL000309.1_341	scl000309.1_341	M35491.1			201520	M35491.1	scl000309.1_341		ILMN_2479921	000160056	S	20	GGGGGGTCACCTGACTTTGAAGGCAGAATTCGACTTGAGTAAGGCCCAGG										
Mus musculus	RefSeq	ILMN_201519	ILMN_240174	EG664804	XM_973024.1	XM_973024.1		664804	94374610	XM_973024.1	EG664804	XP_978118.1	ILMN_2753300	000050142	S	1049	TTTTCCTTTAGAGTTTTGGTTGAAGTTTTCATTTTTGTTCTTTGAGTTAT	5	-	26380323-26380372	5qB1	PREDICTED: Mus musculus predicted gene, EG664804, transcript variant 3 (EG664804), mRNA.					
Mus musculus	RefSeq	ILMN_219389	ILMN_219389	XKR6	NM_173393.1	NM_173393.1		219149	27735007	NM_173393.1	Xkr6	NP_775569.1	ILMN_2708142	004880382	S	1473	GAACACCTTGACCCAGATTGAGAAGGGGACCTTAAGTTTGGTTGCGGTCA	14	+	64438627-64438627:64438628-64438676	14qD1	Mus musculus X Kell blood group precursor related family member 6 homolog (Xkr6), mRNA.				BC024502; XRG6; MGC37452	BC024502; XRG6; MGC37452
Mus musculus	MEEBO	ILMN_190174	ILMN_190174	1700037N05RIK	scl11864.1.1_149						1700037N05Rik		ILMN_1243439	006330255	S	20	GCGAATAGAAGTCGGAGCTTCCTTCACCTTCACCCAGTCTATCCAACTGG										
Mus musculus	MEEBO	ILMN_194055	ILMN_194055	2900074L10RIK	scl0073042.1_36						2900074L10Rik		ILMN_1247924	002970768	S	20	CCTGAAGCTGAACTACAGTAAACAAATCCAGTGGACACAGGAGTTTCTGG										
Mus musculus	RefSeq	ILMN_219166	ILMN_219166	NAT14	NM_201355.2	NM_201355.2		269854	41529835	NM_201355.2	Nat14	NP_958743.1	ILMN_1215981	004010315	S	801	GGGCTGATAGTGAAGCACCGAGGTTGATGGACTTACATTCCCAGTGTGCC	7	+	4876161-4876210	7qA1	Mus musculus N-acetyltransferase 14 (Nat14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	BC047219; MGC57098	BC047219; MGC57098
Mus musculus	Riken	ILMN_202705	ILMN_202705	SSB	ri|E430014C08|PX00098K13|AK088370|2249					AK088370	Ssb		ILMN_2551652	002750102	S	1851	GGTAACACTGTAGACTGGTGTTTATTTTTGAGACACAGAGTTCCCAAGTC						A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_257853	ILMN_257853	EG638695	NM_001039250.1	NM_001039250.1		638695	85986666	NM_001039250.1	EG638695	NP_001034339.1	ILMN_2809443	002360474	S	955	CCCATAGGAGAAGGGGAAGAGAGCACCTGGGCCTGGATGTTATTCTCAAC	14	+	52189455-52189504	14qC1-qC2	Mus musculus predicted gene, EG638695 (EG638695), mRNA.					
Mus musculus	RefSeq	ILMN_195285	ILMN_195285	V1RI1	NM_145845.1	NM_145845.1		252907	22003901	NM_145845.1	V1ri1	NP_665844.1	ILMN_2514220	006770128	S	725	GCTTCCTTTTCTTCTATTGGGTAGATTTCATTCTCTCCTTCTACACAGGT	13	-	22279143-22279192	13qA3.1	Mus musculus vomeronasal 1 receptor, I1 (V1ri1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_220970	ILMN_225772	UBR2	NM_146078.2	NM_146078.2		224826	58615692	NM_146078.2	Ubr2	NP_666190.2	ILMN_1237752	000580059	S	5239	CGACCAGGGACTCAGACGAGGAAATCCTTTACATTTATGCCAAGAGCGGT	17	-	47067414-47067449:47069402-47069415	17qC	Mus musculus ubiquitin protein ligase E3 component n-recognin 2 (Ubr2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IGI]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IGI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IGI]	mKIAA0349; AI462103; MGC36320; 9930021A08Rik; AW540746; KIAA0349; E130209G04Rik	mKIAA0349; AI462103; MGC36320; 9930021A08Rik; AW540746; KIAA0349; E130209G04Rik
Mus musculus	RefSeq	ILMN_206160	ILMN_225772	UBR2	NM_146078.2	NM_146078.2		224826	58615692	NM_146078.2	Ubr2	NP_666190.2	ILMN_1235729	005560673	S	1691	CGTCAGGTGGGACAGCACATTGAGATGGAGCCAGAGTGGGAAGCAGCCTT	17	-	47110926-47110975	17qC	Mus musculus ubiquitin protein ligase E3 component n-recognin 2 (Ubr2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IGI]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IGI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IGI]	mKIAA0349; AI462103; MGC36320; 9930021A08Rik; AW540746; KIAA0349; E130209G04Rik	mKIAA0349; AI462103; MGC36320; 9930021A08Rik; AW540746; KIAA0349; E130209G04Rik
Mus musculus	Riken	ILMN_207416	ILMN_207416	BC002216	ri|F630049N15|PL00015K03|AK089229|1852					AK089229	BC002216		ILMN_1251114	007000315	S	1443	CCTGCCCTGGTCAGTAGACCTGTTTCACGGCTTCTGTAGAATATTACATC										
Mus musculus	Riken	ILMN_205712	ILMN_205712	SIL	ri|C430028M22|PX00079O13|AK049550|2163					AK049550	Sil		ILMN_1227959	006200072	S	1436	CCTAGTCCTCACCCAGTGAGTCAGAAGATCCAGCGCTTATTAGAAGCACA										
Mus musculus	RefSeq	ILMN_215530	ILMN_248396	EFCAB6	NM_029946.3	NM_029946.3		77627	42734488	NM_029946.3	Efcab6	NP_084222.3	ILMN_1249844	007040309	S	4709	GGCATCAGGGTCTGTCCCCAAGACTAGTCAATACCAGACAATGGAGGGCT	15	-	83697395-83697444	15qE2	Mus musculus EF-hand calcium binding domain 6 (Efcab6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	mKIAA1672; 4932408N08Rik; 4931407K02Rik; bM150J22.2; KIAA1672	mKIAA1672; 4932408N08Rik; 4931407K02Rik; bM150J22.2; KIAA1672
Mus musculus	RefSeq	ILMN_215530	ILMN_248396	EFCAB6	NM_029946.3	NM_029946.3		77627	42734488	NM_029946.3	Efcab6	NP_084222.3	ILMN_1253519	001050367	S	501	CGGCTTTCCTCATTCCGCTCACCAAAGATCAATTCCAGGACCTGCTGGCC	15	-	83863361-83863410	15qE2	Mus musculus EF-hand calcium binding domain 6 (Efcab6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	mKIAA1672; 4932408N08Rik; 4931407K02Rik; bM150J22.2; KIAA1672	mKIAA1672; 4932408N08Rik; 4931407K02Rik; bM150J22.2; KIAA1672
Mus musculus	RefSeq	ILMN_248396	ILMN_248396	EFCAB6	NM_029946.3	NM_029946.3		77627	42734488	NM_029946.3	Efcab6	NP_084222.3	ILMN_2928498	007100437	S	4896	GGGCGGCCGCTGGCCTCGGGCGCTCTCAATCATTTGAGCAAATAAAAATA	15	-	83697208-83697257	15qE2	Mus musculus EF-hand calcium binding domain 6 (Efcab6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	mKIAA1672; 4932408N08Rik; 4931407K02Rik; bM150J22.2; KIAA1672	mKIAA1672; 4932408N08Rik; 4931407K02Rik; bM150J22.2; KIAA1672
Mus musculus	RefSeq	ILMN_201094	ILMN_201094	LOC384769	XM_357855.1	XM_357855.1			38089090	XM_357855.1	LOC384769		ILMN_1259420	002940128	S	130	AAGGAGCAGAAACGGGAGGAGGCCGCAGTGGCCACCTTGGCTCCTACTAC										
Mus musculus	RefSeq	ILMN_214316	ILMN_224812	RUSC2	NM_199057.2	NM_199057.2		100213	83641888	NM_199057.2	Rusc2	NP_951012.2	ILMN_1214953	006100471	S	5044	TTGGGGCCAGAGTCCTAAGCCCCCCATGCTGTAAATAGTCTGGTCGTCAG	4	+	43439818-43439867	4qA5	Mus musculus RUN and SH3 domain containing 2 (Rusc2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			mKIAA0375; AI840675	mKIAA0375; AI840675
Mus musculus	RefSeq	ILMN_224812	ILMN_224812	RUSC2	NM_199057.2	NM_199057.2		100213	83641888	NM_199057.2	Rusc2	NP_951012.2	ILMN_3079823	006110286	I	33	AAATCAGATCTCAGGGTATCAGCCCGGTCCCCCTTGTGCGATCTCGAGGA	4	+	43419478-43419527	4qA5	Mus musculus RUN and SH3 domain containing 2 (Rusc2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			mKIAA0375; AI840675	mKIAA0375; AI840675
Mus musculus	RefSeq	ILMN_224812	ILMN_224812	RUSC2	NM_199057.2	NM_199057.2		100213	83641888	NM_199057.2	Rusc2	NP_951012.2	ILMN_3159149	001190465	A	5047	GGGCCAGAGTCCTAAGCCCCCCATGCTGTAAATAGTCTGGTCGTCAGAGT	4	+	43439821-43439870	4qA5	Mus musculus RUN and SH3 domain containing 2 (Rusc2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			mKIAA0375; AI840675	mKIAA0375; AI840675
Mus musculus	RefSeq	ILMN_214638	ILMN_214638	OLFR1019	NM_147015.1	NM_147015.1		259017	22128910	NM_147015.1	Olfr1019	NP_667226.1	ILMN_1254597	000270706	S	719	CCTGCGGGTCTCATCTTACTGGTGTTACCCTTTTTTATGGTACAGTCATG	2	-	85681178-85681227	2qD	Mus musculus olfactory receptor 1019 (Olfr1019), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR180-1	MOR180-1
Mus musculus	RefSeq	ILMN_222998	ILMN_222998	HSD3B4	NM_008294.1	NM_008294.1		15495	6680290	NM_008294.1	Hsd3b4	NP_032320.1	ILMN_2757914	005560086	S	1501	GCTTCCTCATCTCCTTTCCATGTGCCAACGCATTTCGTGTCTGAGAAAAT	3	-	98303059-98303108	3qF2.2	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4 (Hsd3b4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195862	ILMN_242802	NMNAT2	NM_175460.3	NM_175460.3		226518	57863769	NM_175460.3	Nmnat2	NP_780669.1	ILMN_1214700	006760091	S	2	TCCCATCATGACCGAGACCACAAAGACCCACGTTATCCTGCTGGCCTGCG	1	+	154802232-154802238:154802239-154802281	1qG3	Mus musculus nicotinamide nucleotide adenylyltransferase 2 (Nmnat2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + nicotinamide nucleotide = diphosphate + NAD+ [goid 309] [evidence IEA]	PNAT2; PNAT1; MGC113818; AI843915; D030041I09Rik	PNAT2; PNAT1; MGC113818; AI843915; D030041I09Rik
Mus musculus	RefSeq	ILMN_195862	ILMN_242802	NMNAT2	NM_175460.3	NM_175460.3		226518	57863769	NM_175460.3	Nmnat2	NP_780669.1	ILMN_1250959	000450154	S	2453	CCAGAGCTGTGGCTTTTCTTTAGACTGTAGAAGTGACCTCCAGAGGGAGG	1	+	154964321-154964370	1qG3	Mus musculus nicotinamide nucleotide adenylyltransferase 2 (Nmnat2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + nicotinamide nucleotide = diphosphate + NAD+ [goid 309] [evidence IEA]	PNAT2; PNAT1; MGC113818; AI843915; D030041I09Rik	PNAT2; PNAT1; MGC113818; AI843915; D030041I09Rik
Mus musculus	RefSeq	ILMN_211216	ILMN_211216	TMC8	NM_181856.1	NM_181856.1		217356	32469502	NM_181856.1	Tmc8	NP_862904.1	ILMN_2613685	000130681	S	2217	CACAGAGCTGTAGCACCGACCCCACGTCCCTTGGCTCTGCCGCAGCTTCC	11	+	117654094-117654106:117654107-117654143	11qE2	Mus musculus transmembrane channel-like gene family 8 (Tmc8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			EVIN2; FLJ00400; Ever2; mFLJ00400	EVIN2; FLJ00400; Ever2; mFLJ00400
Mus musculus	RefSeq	ILMN_211741	ILMN_211741	NOBOX	NM_130869.1	NM_130869.1		18291	21536235	NM_130869.1	Nobox	NP_570939.1	ILMN_2994428	007150411	S	1643	GGCCTGGGAAGGGGGAAGAATAACCCTGAAGAATGTGAGAGGCTATGGAC	6	-	43233489-43233538	6qB2.1	Mus musculus NOBOX oogenesis homeobox (Nobox), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]	OG2; Og2x	OG2; Og2x
Mus musculus	RefSeq	ILMN_219002	ILMN_236111	KRT78	NM_212487.4	NM_212487.4		332131	145580628	NM_212487.4	Krt78	NP_997652.4	ILMN_2702950	000670328	S	1851	AGGCCAGGTGACCATTCCTGGAAGAGAATCTGGAGGCCAGGTGACCATGC				15qF3	Mus musculus keratin 78 (Krt78), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			2310030B04Rik; Kb40	2310030B04Rik; Kb40
Mus musculus	RefSeq	ILMN_192622	ILMN_236111	KRT78	NM_212487.4	NM_212487.4		332131	145580628	NM_212487.4	Krt78	NP_997652.4	ILMN_2489801	002600592	S	3140	CTGGATACAGCCCCACCATGGGTTCCTGTTCCGTATCTGGCTCAGGCTTC				15qF3	Mus musculus keratin 78 (Krt78), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			2310030B04Rik; Kb40	2310030B04Rik; Kb40
Mus musculus	RefSeq	ILMN_200575	ILMN_253369	EG545242	XM_619521.3	XM_619521.3		545242	94404267	XM_619521.3	EG545242	XP_619521.1	ILMN_1245220	002760348	S	553	AGAATCTTGGCAGCAAGTGAAGCAGGTGATCTTCCAGCTCCGTGCCAAAC	18	+	8694359-8694408	18qA1	PREDICTED: Mus musculus predicted gene, EG545242 (EG545242), mRNA.					
Mus musculus	MEEBO	ILMN_188585	ILMN_188585	SAMHD1	scl0003030.1_14				45501314	BC067198	Samhd1		ILMN_1232707	005310743	S	1	GGAGAGATGGCTGAGGACCCTGATTCAATTCCCAGCACCCAGCAGCCACA								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200919	ILMN_200919	LOC381904	XM_358675.1	XM_358675.1			38087043	XM_358675.1	LOC381904		ILMN_2540464	000610086	S	426	GGGTGACTCTGCTAACGTGTGCGGTTCCTCAACAAAATGTGTCCTCCTTG										
Mus musculus	MEEBO	ILMN_196017	ILMN_196017	9627521_4963_RC	9627521_4963_rc						9627521_4963_rc		ILMN_2520863	005310438	S	9	AATTCCATTGTCTATTTTATTTCGTATATCCGAACTCAGACAAGAGATAG										
Mus musculus	Riken	ILMN_202722	ILMN_202722	NIFK	ri|2700053F06|ZX00063F15|AK019209|270					AK019209	Nifk		ILMN_1251832	003060674	S	120	CGCAGATCCAAGGGCGCACGAAGAAGACTGGAAACAGCAAAGGCTATGCC										
Mus musculus	RefSeq	ILMN_221819	ILMN_221819	RELA	NM_009045.4	NM_009045.4		19697	118130517	NM_009045.4	Rela	NP_033071.1	ILMN_2740859	003440537	S	2600	TAGAGTCAGGAGGGCAGGCTAGATGCTCAGCCACAAGACAGCCTTTACTG	19	+	5648021-5648070	19qA	Mus musculus v-rel reticuloendotheliosis viral oncogene homolog A (avian) (Rela), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISO]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42177] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]	p65	p65
Mus musculus	Riken	ILMN_204861	ILMN_204861	A130053G17RIK	ri|A130053G17|PX00124K18|AK037834|1782					AK037834	A130053G17Rik		ILMN_1226498	003130465	S	1687	GTCGGGAGTATTAGGAGTTTACGTCATGATGAGTCCAAGCCAGCCAGGGC										
Mus musculus	RefSeq	ILMN_195192	ILMN_236001	RCC2	NM_173867.3	NM_173867.3		108911	146198646	NM_173867.3	Rcc2	NP_776292.1	ILMN_1256301	003420605	S	1455	AGAGTACTATCAGTTGGGGTCCATCGCCAACCTTCGGGGAATTGGGGTAT				4qD3	Mus musculus regulator of chromosome condensation 2 (Rcc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		Td60; AA536646; 2610529N02Rik; mKIAA1470; AA675016; 2610510H01Rik	Td60; AA536646; 2610529N02Rik; mKIAA1470; AA675016; 2610510H01Rik
Mus musculus	RefSeq	ILMN_198670	ILMN_224725	GM719	XM_907647.2	XM_907647.2		279706	94408217	XM_907647.2	Gm719	XP_912740.1	ILMN_2532508	007380181	S	670	CCTGTTCCAGCAGAAGGAACTGGAACAAATGTTGACTCCTATAGAGGAGC				XqF1	PREDICTED: Mus musculus gene model 719, (NCBI) (Gm719), mRNA.					
Mus musculus	RefSeq	ILMN_185195	ILMN_224592	USHBP1	NM_181418.2	NM_181418.2		234395	31340881	NM_181418.2	Ushbp1	NP_852083.1	ILMN_1244926	004050202	S	2174	GCCCAGACTTTCCTGTAGGGCCCGGACCACGTTTGCATGTGACACAGAGG	8	-	73909482-73909514:73909515-73909531	8qB3.3	Mus musculus Usher syndrome 1C binding protein 1 (Ushbp1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence ISO]	9430064H24; AIEBP; MCC2; 2210404N08Rik	9430064H24; AIEBP; MCC2; 2210404N08Rik
Mus musculus	RefSeq	ILMN_211785	ILMN_211785	LCE3B	NM_025501.2	NM_025501.2		66344	142382788	NM_025501.2	Lce3b	NP_079777.1	ILMN_2621158	001820091	S	10	TCCTCAGACACGGACTTCTGTCTCCTTTGAATCTAGTCAACTGACTCCTG	3	+	92736910-92736944:92737502-92737516	3qF1	Mus musculus late cornified envelope 3B (Lce3b), mRNA.				2310007F04Rik; Sprrl6A; MGC144697	2310007F04Rik; Sprrl6A; MGC144697
Mus musculus	RefSeq	ILMN_211785	ILMN_211785	LCE3B	NM_025501.2	NM_025501.2		66344	142382788	NM_025501.2	Lce3b	NP_079777.1	ILMN_2619519	000450553	S	445	CTGATCCTGGACACCCTTCTCTGATTGTCTGATGTTCACAGCCCTTGTTC	3	+	92737902-92737951	3qF1	Mus musculus late cornified envelope 3B (Lce3b), mRNA.				2310007F04Rik; Sprrl6A; MGC144697	2310007F04Rik; Sprrl6A; MGC144697
Mus musculus	RefSeq	ILMN_208612	ILMN_209111	CLCN3	NM_007711.2	NM_007711.2		12725	71143117	NM_007711.2	Clcn3	NP_031737.1	ILMN_2603918	004070301	S	2765	CCTCCGTCATATGGCCCAGACGGCAAACCAAGACCCCGCTTCAATAATGT	8	-	63391889-63391938	8qB3.1	Mus musculus chloride channel 3 (Clcn3), transcript variant a, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]	Clc3	Clc3
Mus musculus	RefSeq	ILMN_220440	ILMN_209111	CLCN3	NM_007711.2	NM_007711.2		12725	71143117	NM_007711.2	Clcn3	NP_031737.1	ILMN_2722081	005690064	S	2669	GGAGATTGTGGTAGACATCTTTCGAAAGCTTGGTCTGAGGCAGTGCCTTG	8	-	63398149-63398198	8qB3.1	Mus musculus chloride channel 3 (Clcn3), transcript variant a, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]	Clc3	Clc3
Mus musculus	RefSeq	ILMN_209111	ILMN_209111	CLCN3	NM_007711.2	NM_007711.2		12725	71143117	NM_007711.2	Clcn3	NP_031737.1	ILMN_1221919	006100451	S	2857	GGAAGTTCGTTTGTTGAATAGCACAATTCTTTAATCTGCGGGACTCGTCC	8	-	63391797-63391846	8qB3.1	Mus musculus chloride channel 3 (Clcn3), transcript variant a, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]	Clc3	Clc3
Mus musculus	RefSeq	ILMN_197970	ILMN_236830	LOC625123	XM_889664.2	XM_889664.2		625123	149267470	XM_889664.2	LOC625123	XP_894757.1	ILMN_1225316	007330112	S	378	AAACAGGCAAGTTGGAGTGTGAAGTTGGAGCGCGCAGCTGAAGCCCTGGC	16	-	21062754-21062803	16qB1	PREDICTED: Mus musculus hypothetical LOC625123 (LOC625123), mRNA.					
Mus musculus	RefSeq	ILMN_215452	ILMN_215452	GPR135	NM_181752.1	NM_181752.1		238252	32306523	NM_181752.1	Gpr135	NP_861417.1	ILMN_2659724	001030692	S	1293	CTTCTTCCGAGAGGGTCCACCGGACTCAGTTATGGAAGTCGGCAAACTGC	12	-	73170636-73170685	12qC3	Mus musculus G protein-coupled receptor 135 (Gpr135), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	PAFR	PAFR
Mus musculus	RefSeq	ILMN_197094	ILMN_197094	EG226601	XM_136366.6	XM_136366.6		226601	149245290	XM_136366.6	EG226601	XP_136366.6	ILMN_2526887	006400037	S	1406	CATACCAGTATCGTCTACAAGGGCCAGGGAAATGGGCAGGTGCTCGGGCA	1	-	168413964-168414013	1qH2.3	PREDICTED: Mus musculus predicted gene, EG226601 (EG226601), mRNA.					
Mus musculus	MEEBO	ILMN_215496	ILMN_215496	BC011467	scl39968.13_19	NM_153060.1			23346450	NM_153060.1	BC011467		ILMN_2660293	004830544	S	2292	GTGAATCTCAAAGTCTTAAGAGAGAAGCCAAATATATATTCCTCTTGTAA										
Mus musculus	RefSeq	ILMN_223708	ILMN_223708	GSDMA1	NM_021347.3	NM_021347.3		57911	142385860	NM_021347.3	Gsdma1	NP_067322.1	ILMN_1213351	003800187	S	2583	CCGCTGCTTCAGTTTTGTTTTCAACCCTCAACTCAGGATGAGTGTGGATG	11	+	98538879-98538928	11qD	Mus musculus gasdermin A1 (Gsdma1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Gsdm; BB149167; H312E; Gsdma1	Gsdm; BB149167; H312E; Gsdma1
Mus musculus	RefSeq	ILMN_233277	ILMN_233277	OLFR51	NM_146909.1	NM_146909.1		18351	49170065	NM_146909.1	Olfr51	NP_667120.1	ILMN_2985602	004920672	S	812	CAGTGGCCACCGTCATCTTCACAGTAGTGACACCCATGGTCAACCCCTTC	11	+	50821287-50821336	11qB1.3	Mus musculus olfactory receptor 51 (Olfr51), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR129-3; ID7	MOR129-3; ID7
Mus musculus	RefSeq	ILMN_216841	ILMN_233277	OLFR51	NM_146909.1	NM_146909.1		18351	49170065	NM_146909.1	Olfr51	NP_667120.1	ILMN_1233298	003460717	S	594	GGTCTTCACCATTGGTGGATTGGTATTTATGACTCCATTTACATGCATTA	11	+	50821069-50821118	11qB1.3	Mus musculus olfactory receptor 51 (Olfr51), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR129-3; ID7	MOR129-3; ID7
Mus musculus	RefSeq	ILMN_213815	ILMN_213815	RAPGEF3	NM_144850.1	NM_144850.1		223864	21450060	NM_144850.1	Rapgef3	NP_659099.1	ILMN_1256335	000630707	S	3495	GCCTTGCCTGGGAGAGGGTGGAGAGTTCTGCTTTTCTCTCCACACATCTG	15	-	97575463-97575512	15qF1	Mus musculus Rap guanine nucleotide exchange factor (GEF) 3 (Rapgef3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2310016P22Rik; Epac; Epac1; MGC19192; 9330170P05Rik	2310016P22Rik; Epac; Epac1; MGC19192; 9330170P05Rik
Mus musculus	RefSeq	ILMN_188017	ILMN_224881	SEPT11	NM_001009818.1	NM_001009818.1		52398	57634517	NM_001009818.1	Sept11	NP_001009818.1	ILMN_2449120	002810634	S	4900	CCTGCCGAGTAACTTGGTGTCTGTTATCGTAGTGTGGTGCCAGGTGACCT	5	+	93603876-93603925	5qE2	Mus musculus septin 11 (Sept11), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6230410I01Rik; AW548875; D5Ertd606e	6230410I01Rik; AW548875; D5Ertd606e
Mus musculus	RefSeq	ILMN_190008	ILMN_247069	1700020L13RIK	XM_001000510.1	XM_001000510.1		75629	94380105	XM_001000510.1	1700020L13Rik	XP_001000510.1	ILMN_2466370	000940059	S	883	GCTCCACCTGCAGGGTCTCTGCTTTAAACCAGGGTCCAGTGTTAAAGAGC	7	+	31074955-31075004	7qB1	PREDICTED: Mus musculus RIKEN cDNA 1700020L13 gene (1700020L13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196739	ILMN_196739	HIST1H4A	NM_178192.1	NM_178192.1		326619	30061402	NM_178192.1	Hist1h4a	NP_835499.1	ILMN_2759159	005220689	S	141	TCCGGCCTCATCTACGAGGAGACCCGCGGTGTGCTGAAGGTGTTCCTGGA	13	-	23852836-23852885	13qA3.1	Mus musculus histone cluster 1, H4a (Hist1h4a), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213862	ILMN_213862	CRTAM	NM_019465.2	NM_019465.2		54698	119360369	NM_019465.2	Crtam	NP_062338.2	ILMN_1222699	002490044	S	1163	GTTCCCTGCAATAGAAGATAGGATTTCAGGGCAGCCGCATCAGGCCCTGG	9	-	40781544-40781593	9qA5.1	Mus musculus cytotoxic and regulatory T cell molecule (Crtam), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The series of events in which a stimulus from a tumor cell is received and converted into a molecular signal [goid 2355] [evidence IDA]; The series of events in which a stimulus from a tumor cell is received and converted into a molecular signal [goid 2355] [evidence ISS]; Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target [goid 2860] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target [goid 2860] [evidence ISS]; The series of events in which a stimulus is received by a cell or organism and converted into a molecular signal [goid 51606] [evidence ISS]; The series of events in which a stimulus is received by a cell or organism and converted into a molecular signal [goid 51606] [evidence IDA]; The process by which a cell in a multicellular organism interprets its surroundings [goid 8037] [evidence ISS]; The process by which a cell in a multicellular organism interprets its surroundings [goid 8037] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [evidence ISS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISS]	MGC141606; MGC141607	MGC141606; MGC141607
Mus musculus	RefSeq	ILMN_188266	ILMN_188266	USP20	NM_028846.3	NM_028846.3		74270	142359890	NM_028846.3	Usp20	NP_083122.1	ILMN_1236828	006040603	S	3957	GCTCATTGCACTACTGTGACGCAGTCTGGTTTGTGTTCAGAATGTCACAA	2	+	30878089-30878138	2qB	Mus musculus ubiquitin specific peptidase 20 (Usp20), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	1700055M05Rik; Vdu2; AI467231	1700055M05Rik; Vdu2; AI467231
Mus musculus	RefSeq	ILMN_197648	ILMN_222643	LRRK2	NM_025730.3	NM_025730.3		66725	146231953	NM_025730.3	Lrrk2	NP_080006.3	ILMN_1247216	000870273	S	713	GGGACAAGGAGATTGTGTACCACGTACTTTGCTGCTTGCATTCCCTGGCG				15qE3	Mus musculus leucine-rich repeat kinase 2 (Lrrk2), mRNA.	The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of GTP [goid 34211] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D630001M17Rik; 9330188B09Rik; 4921513O20Rik; AW561911; Gm927; cI-46	D630001M17Rik; 9330188B09Rik; 4921513O20Rik; AW561911; Gm927; cI-46
Mus musculus	RefSeq	ILMN_197811	ILMN_222643	LRRK2	NM_025730.3	NM_025730.3		66725	146231953	NM_025730.3	Lrrk2	NP_080006.3	ILMN_1246556	005700021	S	3612	CACGTGCATTCCAGAAGCGATTTTCAGTCTTCCGCACTTGCGGTCCTTGG				15qE3	Mus musculus leucine-rich repeat kinase 2 (Lrrk2), mRNA.	The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of GTP [goid 34211] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	D630001M17Rik; 9330188B09Rik; 4921513O20Rik; AW561911; Gm927; cI-46	D630001M17Rik; 9330188B09Rik; 4921513O20Rik; AW561911; Gm927; cI-46
Mus musculus	RefSeq	ILMN_198245	ILMN_245013	PLCXD1	XM_988886.1	XM_988886.1		403178	94376643	XM_988886.1	Plcxd1	XP_993980.1	ILMN_1218945	000290093	S	285	TCCCCACCAATATGGGATCGCAGGCCACAGCTGATCATAACGGCTGACTG				5qF	PREDICTED: Mus musculus phosphatidylinositol-specific phospholipase C, X domain containing 1 (Plcxd1), mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197485	ILMN_197485	LOC269409	XM_195441.2	XM_195441.2			38076203	XM_195441.2	LOC269409		ILMN_2528292	001190615	S	381	GGGTGTGTGGTACAATTCCTTCTGGGCGTGGATAGGAGATGTCTCTGGAC										
Mus musculus	RefSeq	ILMN_211792	ILMN_247158	SLC35E3	NM_029875.2	NM_029875.2		215436	37497123	NM_029875.2	Slc35e3	NP_084151.2	ILMN_2619574	004010544	S	3287	GCCCTGGGGACCGGAGTTGATTTGTACTGCGTACAAATCCTAGCTGTAGA	10	-	117170880-117170929	10qD2	Mus musculus solute carrier family 35, member E3 (Slc35e3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9330166G04Rik; AI481200	9330166G04Rik; AI481200
Mus musculus	RefSeq	ILMN_211189	ILMN_211189	CHST7	NM_021715.1	NM_021715.1		60322	11096335	NM_021715.1	Chst7	NP_068361.1	ILMN_1216374	004640278	S	1946	AGAGATGTGATCTGGTTTCCTTTCACATCAGCAGATGTCTGGACAAAACC	X	+	19674397-19674446	XqA1.3	Mus musculus carbohydrate (N-acetylglucosamino) sulfotransferase 7 (Chst7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 6'-sulfate [goid 8459] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin 2'-O-sulfate. Results in sulfation of glucuronic acid and iduronic acid residues [goid 34482] [evidence IEA]	GST5; 2600013M07Rik	GST5; 2600013M07Rik
Mus musculus	RefSeq	ILMN_252861	ILMN_252861	CHKA	NM_001025566.1	NM_001025566.1		12660	70908365	NM_001025566.1	Chka	NP_001020737.1	ILMN_3099242	004670554	A	696	CGTTGGCGATGAGCCTCGGAAAGTGCTCTTGCGGCTCTATGGGGCAATCT	19	+	3864702-3864751	19qA	Mus musculus choline kinase alpha (Chka), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + ethanolamine = ADP + O-phosphoethanolamine [goid 4305] [evidence IEA]; Catalysis of the reaction: ATP + choline = ADP + O-phosphocholine [goid 4103] [evidence IDA]; Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion [goid 4104] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Chetk-alpha; ChoK; Chk; EtnK-alpha	Chetk-alpha; ChoK; Chk; EtnK-alpha
Mus musculus	RefSeq	ILMN_252861	ILMN_252861	CHKA	NM_001025566.1	NM_001025566.1		12660	70908365	NM_001025566.1	Chka	NP_001020737.1	ILMN_3026397	003420280	I	3218	AGAACCACATACCAAGCCAGGCGTGGTGGCGCACGCCTTTAATCCCAGCA	19	+	3867224-3867273	19qA	Mus musculus choline kinase alpha (Chka), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + ethanolamine = ADP + O-phosphoethanolamine [goid 4305] [evidence IEA]; Catalysis of the reaction: ATP + choline = ADP + O-phosphocholine [goid 4103] [evidence IDA]; Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion [goid 4104] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Chetk-alpha; ChoK; Chk; EtnK-alpha	Chetk-alpha; ChoK; Chk; EtnK-alpha
Mus musculus	RefSeq	ILMN_205275	ILMN_252861	CHKA	NM_001025566.1	NM_001025566.1		12660	70908365	NM_001025566.1	Chka	NP_001020737.1	ILMN_1255524	002510162	S	1697	CCTTTGAAGGCCAGAAGAAGGCACCAGATCCCCTAGGTCTGCAGTTAGAG	19	+	3865703-3865752	19qA	Mus musculus choline kinase alpha (Chka), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + ethanolamine = ADP + O-phosphoethanolamine [goid 4305] [evidence IEA]; Catalysis of the reaction: ATP + choline = ADP + O-phosphocholine [goid 4103] [evidence IDA]; Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion [goid 4104] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Chetk-alpha; ChoK; Chk; EtnK-alpha	Chetk-alpha; ChoK; Chk; EtnK-alpha
Mus musculus	RefSeq	ILMN_239674	ILMN_239674	CREB1	NM_009952.2	NM_009952.2		12912	82546875	NM_009952.2	Creb1	NP_034082.1	ILMN_3120454	000620707	A	7994	CCTCCAAATCTGTCCCTTCAGGCATTTTCCATGTCATACACACGGTGCCA	1	+	64650695-64650744	1qC2	Mus musculus cAMP responsive element binding protein 1 (Creb1), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb
Mus musculus	Riken	ILMN_207006	ILMN_207006	6530402D11RIK	ri|6530402D11|PX00649G05|AK078339|1262					AK078339	6530402D11Rik		ILMN_1258291	004760470	S	1143	GAGTACCGCTGCTCTAGTTCAGAAAATGTCCCTCTACTTGTCCTTTGCAG										
Mus musculus	RefSeq	ILMN_198749	ILMN_198749	GM44	XM_111953.1	XM_111953.1		212952	20349082	XM_111953.1	Gm44	XP_111953.1	ILMN_2532787	002570400	S	513	GGTTCGTGCTGGCCAGGGCTTCCCAAAGACTGGTTTCCTGATGACTGTAC	X	+	88137993-88138042	XqC1	PREDICTED: Mus musculus gene model 44, (NCBI) (Gm44), mRNA.					
Mus musculus	RefSeq	ILMN_250186	ILMN_250186	SLC41A3	NM_001037493.1	NM_001037493.1		71699	82734224	NM_001037493.1	Slc41a3	NP_001032570.1	ILMN_3075513	007150092	I	373	TATCCTGCTGTCCGGCCTGGGCATGATGACGGCTGGCTTGGTGATGAACA	6	+	90569582-90569631	6qD1	Mus musculus solute carrier family 41, member 3 (Slc41a3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SLC41A1-L2; AI480742; 1010001P06Rik	SLC41A1-L2; AI480742; 1010001P06Rik
Mus musculus	RefSeq	ILMN_250186	ILMN_250186	SLC41A3	NM_001037493.1	NM_001037493.1		71699	82734224	NM_001037493.1	Slc41a3	NP_001032570.1	ILMN_3154553	006550500	A	1917	CAGGCTGTTCTAACCTGAAGATGCTGAGGAAGGAGCCTATTGGTGCAACC	6	+	90596068-90596117	6qD1	Mus musculus solute carrier family 41, member 3 (Slc41a3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SLC41A1-L2; AI480742; 1010001P06Rik	SLC41A1-L2; AI480742; 1010001P06Rik
Mus musculus	Riken	ILMN_205901	ILMN_205901	A830007B05RIK	ri|A830007B05|PX00153J12|AK043541|2030					AK043541	A830007B05Rik		ILMN_2576059	002230333	S	1950	TGTTGCCAGCACCCACAGGGCAGCTAACAGAACCTGATGCGCACACACAG										
Mus musculus	MEEBO	ILMN_220735	ILMN_220735	AB023957	scl51871.1.1_203	NM_133237.1			18875401	NM_133237.1	AB023957		ILMN_2726030	007200484	S	549	CAGTAGCTTTCAGTGCGGTGTTAAATTATAACGAAGGCATGGAGTACCAG										
Mus musculus	RefSeq	ILMN_248606	ILMN_248606	LOC624855	NM_001037922.1	NM_001037922.1		624855	85702317	NM_001037922.1	LOC624855	NP_001033011.1	ILMN_2916239	003360603	S	2028	CACAGAGAAACCCTTTCTTGAAAAACAGAGCACGGGGGCCGGGGGAGAAA	8	+	88063358-88063407	8qC3	Mus musculus similar to Cyclin-dependent kinases regulatory subunit 1 (CKS-1) (Sid 1334) (LOC624855), mRNA.					
Mus musculus	RefSeq	ILMN_224210	ILMN_241092	PSMB1	NM_011185.3	NM_011185.3		19170	142388089	NM_011185.3	Psmb1	NP_035315.1	ILMN_1239724	006400292	S	564	AATATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAGCCATGAG	17	-	15613107-15613156	17qA2	Mus musculus proteasome (prosome, macropain) subunit, beta type 1 (Psmb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Lmpc5; C81484; AA409053	Lmpc5; C81484; AA409053
Mus musculus	RefSeq	ILMN_190892	ILMN_235404	DARS2	NM_172644.3	NM_172644.3		226539	141801674	NM_172644.3	Dars2	NP_766232.1	ILMN_2474182	006370528	S	2972	CCCCAGCTGCTTATATAATGTGAATGACACTTGTCCTGGCTGTCTCACAG	1	-	162971303-162971352	1qH2.1	Mus musculus aspartyl-tRNA synthetase 2 (mitochondrial) (Dars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6422] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp) [goid 4815] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC99963; 5830468K18Rik	MGC99963; 5830468K18Rik
Mus musculus	RefSeq	ILMN_201434	ILMN_201434	LOC385157	XM_358092.1	XM_358092.1			38093697	XM_358092.1	LOC385157		ILMN_2542277	001340674	S	904	GACCCGCTCATCTCCAACATCATAAAAGAACCCATACTGGAGAGAAACCT										
Mus musculus	RefSeq	ILMN_207160	ILMN_249243	B3GALTL	NM_001081204.1	NM_001081204.1		381694	124487080	NM_001081204.1	B3galtl	NP_001074673.1	ILMN_1252289	005270315	S	743	AGGACCGGCCCTCACCCCTGTGCCTGAGTTTTGTACAGAAGATGTGGACC	5	+	150537974-150538023	5qG3	Mus musculus beta 1,3-galactosyltransferase-like (B3galtl), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose [goid 6004] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Gm1057	Gm1057
Mus musculus	RefSeq	ILMN_215465	ILMN_245928	CLCA6	NM_207208.3	NM_207208.3		99663	110556624	NM_207208.3	Clca6	NP_997091.3	ILMN_2742695	000110202	S	2704	GCTGTCTGTTTTGGGCGCTCTTGTTCTAGTTTGTATTATTGTAGGTACCA	3	-	144615694-144615743	3qH2	Mus musculus chloride channel calcium activated 6 (Clca6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts [goid 15276] [evidence IMP]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IDA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IMP]	9130020L07Rik; AI504701	9130020L07Rik; AI504701
Mus musculus	RefSeq	ILMN_215465	ILMN_245928	CLCA6	NM_207208.3	NM_207208.3		99663	110556624	NM_207208.3	Clca6	NP_997091.3	ILMN_2752464	001940129	S	2850	GCATATCCCATGTCATCATGAACTCAAAAGTAACTTCAAGAGGGTCTAAA	3	-	144615548-144615597	3qH2	Mus musculus chloride channel calcium activated 6 (Clca6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts [goid 15276] [evidence IMP]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IDA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IMP]	9130020L07Rik; AI504701	9130020L07Rik; AI504701
Mus musculus	RefSeq	ILMN_221667	ILMN_221667	HPCAL1	NM_016677.3	NM_016677.3		53602	146134509	NM_016677.3	Hpcal1	NP_057886.1	ILMN_2772515	004290100	S	1282	TATATGAGTTATATGTACGGTGAGATGGACTATAATGTTCAGCCCCTGTA				12qA1.1-qA1.2	Mus musculus hippocalcin-like 1 (Hpcal1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	VILIP3; Vsnl3; Nvp3; Vnsl3; NVP-3	VILIP3; Vsnl3; Nvp3; Vnsl3; NVP-3
Mus musculus	RefSeq	ILMN_221667	ILMN_221667	HPCAL1	NM_016677.3	NM_016677.3		53602	146134509	NM_016677.3	Hpcal1	NP_057886.1	ILMN_2738750	004570736	S	88	TTGTCTCTCCGAGCGGCGAAGGTCGCAGAGCAGGCGCGGCGGCTGCGGGA				12qA1.1-qA1.2	Mus musculus hippocalcin-like 1 (Hpcal1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	VILIP3; Vsnl3; Nvp3; Vnsl3; NVP-3	VILIP3; Vsnl3; Nvp3; Vnsl3; NVP-3
Mus musculus	RefSeq	ILMN_188583	ILMN_262024	NLRP10	NM_175532.3	NM_175532.3		244202	84872194	NM_175532.3	Nlrp10	NP_780741.1	ILMN_2453918	000130187	S	3469	ATGTTCTAAGATTCCACTAAGGAGACACATTCAATTCTAACTGGCTTGAG	7	-	116066395-116066444	7qE3	Mus musculus NLR family, pyrin domain containing 10 (Nlrp10), mRNA.		Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence RCA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6430548I20Rik; PAN5; Napl10; Pynod; Nalp10	6430548I20Rik; PAN5; Napl10; Pynod; Nalp10
Mus musculus	RefSeq	ILMN_209342	ILMN_207467	PI4K2B	NM_028744.2	NM_028744.2		67073	145966815	NM_028744.2	Pi4k2b	NP_083020.2	ILMN_2627217	005360474	S	2549	TCACCGTCTTGGTGCAGGTAAGGAGTGAGATACCACTGCCCTGAGGAGTC				5qC1	Mus musculus phosphatidylinositol 4-kinase type 2 beta (Pi4k2b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 4-phosphate [goid 4430] [evidence IEA]	4933409G22Rik; 2610042N09Rik	4933409G22Rik; 2610042N09Rik
Mus musculus	RefSeq	ILMN_209342	ILMN_207467	PI4K2B	NM_028744.2	NM_028744.2		67073	145966815	NM_028744.2	Pi4k2b	NP_083020.2	ILMN_2594897	003390730	S	2866	AAATTGAAATAGTTAAAGACTATTTTAAACATCTGACCATGTTAGAATAG				5qC1	Mus musculus phosphatidylinositol 4-kinase type 2 beta (Pi4k2b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 4-phosphate [goid 4430] [evidence IEA]	4933409G22Rik; 2610042N09Rik	4933409G22Rik; 2610042N09Rik
Mus musculus	RefSeq	ILMN_248905	ILMN_248905	LRRC34	NM_027941.1	NM_027941.1		71827	110625842	NM_027941.1	Lrrc34	NP_082217.1	ILMN_2786469	004250239	S	1357	GCCGTCATCTTCCGCAGGCTTTGCTCTTGTTCCTGTGGGCGAACATCTAT	3	-	30523622-30523671	3qA3	Mus musculus leucine rich repeat containing 34 (Lrrc34), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC118377; MGC144586; 1700007J06Rik	MGC118377; MGC144586; 1700007J06Rik
Mus musculus	RefSeq	ILMN_195896	ILMN_248905	LRRC34	NM_027941.1	NM_027941.1		71827	110625842	NM_027941.1	Lrrc34	NP_082217.1	ILMN_2519746	002900274	S	1687	GCAGATTTGCTTTGCAGCTGGCAAGTTTACAGTGGATTTTGAGAGAGATC	3	-	30523292-30523341	3qA3	Mus musculus leucine rich repeat containing 34 (Lrrc34), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC118377; MGC144586; 1700007J06Rik	MGC118377; MGC144586; 1700007J06Rik
Mus musculus	RefSeq	ILMN_216741	ILMN_216741	MEIS3	NM_008627.2	NM_008627.2		17537	116642899	NM_008627.2	Meis3	NP_032653.2	ILMN_1242943	003060500	S	1558	CCTAAGCAGAAAACTGGGCCAAGGTCTGAAGAAGATGGTGGCTGGGGCCC	7	+	16771630-16771679	7qA2	Mus musculus Meis homeobox 3 (Meis3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]	MGC144812; Meis3; MGC144813; AI573393	MGC144812; Meis3; MGC144813; AI573393
Mus musculus	RefSeq	ILMN_216741	ILMN_216741	MEIS3	NM_008627.2	NM_008627.2		17537	116642899	NM_008627.2	Meis3	NP_032653.2	ILMN_3050644	002650482	I	1455	CCCCAGTAGCTTGAGGACCAAGAGCCCACTTGAGGGTCTCTCAAGGGCAA	7	+	16771527-16771576	7qA2	Mus musculus Meis homeobox 3 (Meis3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]	MGC144812; Meis3; MGC144813; AI573393	MGC144812; Meis3; MGC144813; AI573393
Mus musculus	RefSeq	ILMN_216741	ILMN_216741	MEIS3	NM_008627.2	NM_008627.2		17537	116642899	NM_008627.2	Meis3	NP_032653.2	ILMN_3126848	007400296	A	935	AGGAGAGGATGAGGACCTGGACCTGGAACGCAGACGGAACAAGAAGAGGG	7	+	16767709-16767758	7qA2	Mus musculus Meis homeobox 3 (Meis3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]	MGC144812; Meis3; MGC144813; AI573393	MGC144812; Meis3; MGC144813; AI573393
Mus musculus	RefSeq	ILMN_197343	ILMN_310024	OTTMUSG00000001070	NM_001099331.1	NM_001099331.1		100043899	150010586	NM_001099331.1	OTTMUSG00000001070	NP_001092801.1	ILMN_2527796	006760128	S	798	CATTAAGGGCAACTGGATCGGAGAGGCACCCTACAAGGCCGGGAAGCCAT				2qH3	Mus musculus predicted gene, OTTMUSG00000001070 (OTTMUSG00000001070), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196622	ILMN_196622	B430305P08RIK	XM_148123.1	XM_148123.1			20892692	XM_148123.1	B430305P08Rik		ILMN_1246772	005700382	S	413	CGGGGAGGGGGTTCTACGCCTCTTGTCTCTTTGTTGCATGCTGAACACTC										
Mus musculus	Riken	ILMN_206755	ILMN_206755	PROM	ri|D630050N21|PX00198N11|AK085654|1517					AK085654	Prom		ILMN_1238150	000730746	S	1232	ATGGTGGCAAAGGTGACCAAGAATAGCCCACCCTGGCTTCCTGGCTTCCC										
Mus musculus	RefSeq	ILMN_209016	ILMN_209016	CPT1A	NM_013495.1	NM_013495.1		12894	27804308	NM_013495.1	Cpt1a	NP_038523.1	ILMN_2591776	002260164	S	4177	TGCTGTTTGGATATAAATCTTAGAAATGCATGTGTGAACGAATATAGCTG	19	+	3385656-3385705	19qA	Mus musculus carnitine palmitoyltransferase 1a, liver (Cpt1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine [goid 4095] [evidence IEA]	C730027G07; CPTI; Cpt1	C730027G07; CPTI; Cpt1
Mus musculus	RefSeq	ILMN_213878	ILMN_213878	COG4	NM_133973.2	NM_133973.2		102339	118498357	NM_133973.2	Cog4	NP_598734.1	ILMN_1228129	004490053	S	2196	CCGAGACAAGTTCGCCCGCCTCTCTCAGATGGCTACAATCCTTAACCTAG	8	+	113405345-113405394	8qE1	Mus musculus component of oligomeric golgi complex 4 (Cog4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		D8Ertd515e; AW554810	D8Ertd515e; AW554810
Mus musculus	RefSeq	ILMN_219638	ILMN_219638	SAMD5	NM_177271.3	NM_177271.3		320825	110556633	NM_177271.3	Samd5	NP_796245.2	ILMN_1254210	004890678	S	1875	CCACCCTTTCACTACTCAGAAGTACAGCACGGATGAAAGCTTGTGCCACT	10	-	9347627-9347676	10qA1	Mus musculus sterile alpha motif domain containing 5 (Samd5), mRNA.				E130306M17Rik	E130306M17Rik
Mus musculus	RefSeq	ILMN_195260	ILMN_229118	CAR8	NM_007592.3	NM_007592.3		12319	86439975	NM_007592.3	Car8	NP_031618.2	ILMN_2682015	006550594	S	1419	ACAGCTTAGAACATCAAAATACAATATGAAGGAGTCATAAAAATTATCTC	4	-	8072893-8072942	4qA1	Mus musculus carbonic anhydrase 8 (Car8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IDA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	wdl; Cals1; AW546993; Carp; Cals	wdl; Cals1; AW546993; Carp; Cals
Mus musculus	RefSeq	ILMN_195260	ILMN_229118	CAR8	NM_007592.3	NM_007592.3		12319	86439975	NM_007592.3	Car8	NP_031618.2	ILMN_2513960	006660682	S	3773	GAAACATTACTGTGTGTTTGTATGAATGGATTTGAAAGTCTAATTCGTCC	4	-	8070539-8070588	4qA1	Mus musculus carbonic anhydrase 8 (Car8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IDA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	wdl; Cals1; AW546993; Carp; Cals	wdl; Cals1; AW546993; Carp; Cals
Mus musculus	RefSeq	ILMN_223927	ILMN_231351	KLHL1	NM_053105.2	NM_053105.2		93688	65301466	NM_053105.2	Klhl1	NP_444335.2	ILMN_2771673	006650594	S	3060	CAAGAATTTCTCAAGAACAGGATTTTTATAGATTTACCTGCTTGTAACAA	14	-	96505422-96505471	14qE2.1	Mus musculus kelch-like 1 (Drosophila) (Klhl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21680] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA1490; mKIAA1490	KIAA1490; mKIAA1490
Mus musculus	RefSeq	ILMN_214118	ILMN_247644	ZFP712	XM_908651.3	XM_908651.3		78251	149264468	XM_908651.3	Zfp712	XP_913744.1	ILMN_2644445	005260241	S	2910	GTGTGTGAAACTTAACATTTTAAAATAAATTTGAATGGTTCATATATTTT				13qB3	PREDICTED: Mus musculus zinc finger protein 712, transcript variant 38 (Zfp712), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_202429	ILMN_202429	MAPBPIP-PENDING	ri|2010011E17|ZX00057J21|AK008185|438					AK008185	Mapbpip-pending		ILMN_2549544	004210477	S	183	CTACTCCGGTTATGGGGACACAGATGCCCGGGTCACTGCGGCCATCGCCA										
Mus musculus	MEEBO	ILMN_184230	ILMN_184230	TSHR	scl0022095.1_320	NM_011648.2			31560529	NM_011648.2	Tshr		ILMN_2416928	005810706	S	6	GCTCCACCTCAAGCTACCAAAAGAAGCCTGGAAAGCCAAACATATAGATG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Any process that modulates the frequency, rate or extent of locomotion of a cell or organism [goid 40012] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Combining with thyroid-stimulating hormone to initiate a change in cell activity [goid 4996] [evidence IDA]		
Mus musculus	MEEBO	ILMN_185647	ILMN_185647	A030011A13RIK	scl37958.1_312						A030011A13Rik		ILMN_2428807	005820372	S	12	AGGACTGACTACCTTATGCATCCAAGCCTCAAGGCCACCAAGAAAGGGGG										
Mus musculus	MEEBO	ILMN_219039	ILMN_219039	BMP10	scl29786.2.1_44				6857762	NM_009756	Bmp10		ILMN_2774869	004780035	S	921	CGCTCGGATCAGGAGGAACGCCAAGGGGAACTACTGTAAGAAGACCCCAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]; Any process that decreases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division [goid 10614] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [evidence IMP]; The process whose specific outcome is the progression of a ventricular cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55015] [evidence IDA]; The process by which the anatomical structure of cardiac atrium muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55009] [pmid 10072785] [evidence IEP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [pmid 10072785] [evidence IEP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	MEEBO	ILMN_209338	ILMN_209338	PDPK1	scl50221.17.1_145	NM_011062.1			6755019	NM_011062.1	Pdpk1		ILMN_2594855	000730280	S	1814	GATACCTGCCCCAGCGCGGCTCGGCCGCCACCCAGGACGCTTCCAGACCA						A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell [goid 6972] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of a 3-phosphoinositide [goid 4676] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213749	ILMN_247748	BC048644	NM_001033485.2	NM_001033485.2		407789	141803107	NM_001033485.2	BC048644	NP_001028657.1	ILMN_2640388	006620372	S	247	CCGCAAACTTCGCTCGTCCTTCCGGCTTGATCGGACCAAGATGAGGTCTT	8	+	124440315-124440364	8qE1	Mus musculus cDNA sequence BC048644 (BC048644), mRNA.					
Mus musculus	RefSeq	ILMN_210186	ILMN_210186	STK4	NM_021420.2	NM_021420.2		58231	31543785	NM_021420.2	Stk4	NP_067395.1	ILMN_3004142	006550754	S	4829	GGAATCCGTGTTCTTTGTGTCTCTTCCACCAGCCTGCACTCAGACCAACT	2	+	163846602-163846651	2qH3	Mus musculus serine/threonine kinase 4 (Stk4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence ISO]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mst1; Kas-2; AU020804; Ysk3; AI447339	Mst1; Kas-2; AU020804; Ysk3; AI447339
Mus musculus	RefSeq	ILMN_218228	ILMN_323082	LOC100047427	XM_001478949.1	XM_001478949.1		100047427	149262338	XM_001478949.1	LOC100047427	XP_001478999.1	ILMN_1229091	003310672	S	5299	CTCAAGCTGCCGGACCTGCGGACCCTGAACAACATGCATTCCGAGAAGCT					PREDICTED: Mus musculus similar to thyroid hormone receptor (LOC100047427), mRNA.					
Mus musculus	RefSeq	ILMN_216829	ILMN_216829	DLX3	NM_010055.2	NM_010055.2		13393	40254590	NM_010055.2	Dlx3	NP_034185.1	ILMN_2675833	007380021	S	2389	GTCGAAAGAGGGATGTGGGCTCCTGCTGGATTTGGGTTTCGTGGGAAGTG	11	+	94981404-94981453	11qD	Mus musculus distal-less homeobox 3 (Dlx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Dlx-3; AV237891	Dlx-3; AV237891
Mus musculus	MEEBO	ILMN_210506	ILMN_210506	GCH1	scl014528.1_141	NM_008102.2			31542888	NM_008102.2	Gch1		ILMN_2753029	004060348	S	2447	TTTCTGGGGGGTTGGTCACTTGTATCCCTTCTGAACGACCCTGTTGGGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IC ]; The chemical reactions and pathways resulting in the formation of aromatic compounds, any substance containing an aromatic carbon ring [goid 19438] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The process that modulates the force with which blood travels through the lungs. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 14916] [evidence IMP]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence ISO]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [evidence ISO]		
Mus musculus	RefSeq	ILMN_190320	ILMN_223226	KANK1	NM_181404.5	NM_181404.5		107351	75677562	NM_181404.5	Kank1	NP_852069.4	ILMN_2469097	001500397	S	513	GGAAACCCCTTACGGTTTTCAGCTAGACTTAGATTTCGTCAAATACGTGG	19	+	25483637-25483686	19qB	Mus musculus KN motif and ankyrin repeat domains 1 (Kank1), mRNA.				MGC90826; D330024H06Rik; AW121052; AU015049; mKIAA0172; A930031B09Rik	MGC90826; D330024H06Rik; AW121052; AU015049; mKIAA0172; A930031B09Rik
Mus musculus	RefSeq	ILMN_223226	ILMN_223226	KANK1	NM_181404.5	NM_181404.5		107351	75677562	NM_181404.5	Kank1	NP_852069.4	ILMN_1242456	006550044	S	4868	CCGTTGGGAAGTCCTTCCAGTATTCCATTCCAGGGTGCTTCTTGCTTCTG	19	+	25508444-25508493	19qB	Mus musculus KN motif and ankyrin repeat domains 1 (Kank1), mRNA.				MGC90826; D330024H06Rik; AW121052; AU015049; mKIAA0172; A930031B09Rik	MGC90826; D330024H06Rik; AW121052; AU015049; mKIAA0172; A930031B09Rik
Mus musculus	RefSeq	ILMN_185593	ILMN_223226	KANK1	NM_181404.5	NM_181404.5		107351	75677562	NM_181404.5	Kank1	NP_852069.4	ILMN_1241060	005820129	S	365	TCGCACAAGTCGTCACTGTTTGCTGTGTCCCTCCTTGGATTTGAGCCAGC	19	+	25452934-25452983	19qB	Mus musculus KN motif and ankyrin repeat domains 1 (Kank1), mRNA.				MGC90826; D330024H06Rik; AW121052; AU015049; mKIAA0172; A930031B09Rik	MGC90826; D330024H06Rik; AW121052; AU015049; mKIAA0172; A930031B09Rik
Mus musculus	RefSeq	ILMN_219451	ILMN_219451	MEOX2	NM_008584.3	NM_008584.3		17286	145966777	NM_008584.3	Meox2	NP_032610.1	ILMN_2709087	003060274	S	2046	ATTAGGATCATAGGCAAATCAGTTACCTTGCAGAACGAGTCTTGTGCGGC				12qA3	Mus musculus mesenchyme homeobox 2 (Meox2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The process by which individual somites establish identity during embryogenesis [goid 1757] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Mox2; AI528662; Mox-2; Gax	Mox2; AI528662; Mox-2; Gax
Mus musculus	MEEBO	ILMN_223248	ILMN_223248	D330010C22RIK	scl0230943.1_62				51709710	XM_485505	D330010C22Rik		ILMN_1222789	003420491	S	1469	AGGAAGGAAGAAGAAACAGGGGAGACACCTCACGGCTGGAAGCCCACTAT										
Mus musculus	MEEBO	ILMN_192421	ILMN_192421	SCL0001337.1_14	scl0001337.1_14	U66057.1			1794220	U66057.1	scl0001337.1_14		ILMN_2487914	005130324	S	2	CGGCAAAGAGGAAGGAAAGCTATGCAGACAGGCAGGAGATAGAGCCGGCC										
Mus musculus	RefSeq	ILMN_210371	ILMN_210371	RRP9	NM_145620.4	NM_145620.4		27966	133893319	NM_145620.4	Rrp9	NP_663595.1	ILMN_1223551	005360458	S	1390	AGGATCAAAGAGGCCCGGAACTCAGTCTGCATCATCCCACTCCGCAGGCT	9	+	106387599-106387648	9qF1	Mus musculus RRP9, small subunit (SSU) processome component, homolog (yeast) (Rrp9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	U3-55k; Rnu3ip2; 55kDa; MGC25949; D9Wsu10e; D19435	U3-55k; Rnu3ip2; 55kDa; MGC25949; D9Wsu10e; D19435
Mus musculus	RefSeq	ILMN_209218	ILMN_209218	ARL4D	NM_031160.1	NM_031160.1		80981	13624322	NM_031160.1	Arl4d	NP_112437.1	ILMN_2593709	006370612	S	1087	ATGCATTTGGGATAAGCGGAGAACATCTTCCCTCTCGCACAGTTGCGGGG	11	+	101483808-101483824:101483863-101483895	11qD	Mus musculus ADP-ribosylation factor-like 4D (Arl4d), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Arf4l; 1110036H21Rik; ARL6; AW456149; MGC28743; Arl5; Arfl4	Arf4l; 1110036H21Rik; ARL6; AW456149; MGC28743; Arl5; Arfl4
Mus musculus	RefSeq	ILMN_232474	ILMN_232474	AMT	NM_001013814.1	NM_001013814.1		434437	62000669	NM_001013814.1	Amt	NP_001013836.1	ILMN_3160992	001410678	S	958	AGGTACAGCGGAGACGTGTGGGGCTGATATGTGAAGGGGCTCCAGTGAGA	9	+	108203470-108203519	9qF2	Mus musculus aminomethyltransferase (Amt), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid [goid 6546] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein [goid 4047] [evidence IEA]	Amt; EG434437	Amt; EG434437
Mus musculus	RefSeq	ILMN_209336	ILMN_209336	PACSIN1	NM_011861.2	NM_011861.2		23969	133892741	NM_011861.2	Pacsin1	NP_035991.1	ILMN_2644415	006620458	S	3960	CCGAGACGTGCCGTGGTCTCAGCAATGCACCTGTTTTATACATGATTGTG	17	+	27842505-27842554	17qA3.3	Mus musculus protein kinase C and casein kinase substrate in neurons 1 (Pacsin1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]	A830061D09Rik; H74; syndapin; mKIAA1379	A830061D09Rik; H74; syndapin; mKIAA1379
Mus musculus	RefSeq	ILMN_212095	ILMN_212095	ACSL1	NM_007981.3	NM_007981.3		14081	75992918	NM_007981.3	Acsl1	NP_032007.2	ILMN_2622671	002810047	S	2619	GTGGATGCTACAAGTTCTGTCTCCTGTTTTTCTAACTGAGGGGTTAGGAC	8	+	47620132-47620181	8qB1.1	Mus musculus acyl-CoA synthetase long-chain family member 1 (Acsl1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: ATP + acetate + CoA = ADP + phosphate + acetyl-CoA [goid 43758] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]	Facl2; FACS; Acs; Acas; Acas1	Facl2; FACS; Acs; Acas; Acas1
Mus musculus	RefSeq	ILMN_237598	ILMN_237598	KCNQ2	NM_001006677.1	NM_001006677.1		16536	54873653	NM_001006677.1	Kcnq2	NP_001006678.1	ILMN_3045269	005720382	I	1905	GCTCAGGCTGGTTAGATGGGGCTCCAGTGTCAGCTCTGCTTGGTAGAGAA	2	-	180831050-180831099	2qH4	Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 9, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	HNSPC; KQT2	HNSPC; KQT2
Mus musculus	RefSeq	ILMN_215685	ILMN_215685	OLFR1506	NM_146265.1	NM_146265.1		257665	22128630	NM_146265.1	Olfr1506	NP_666377.1	ILMN_1251816	002570497	S	796	GACAAGATGGTAACTGTGTTCTACACGGTGATAACTCCCCTCCTCAACCC	2	-	90061808-90061857	2qE1	Mus musculus olfactory receptor 1506 (Olfr1506), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR228-4	MOR228-4
Mus musculus	RefSeq	ILMN_215541	ILMN_242844	F9	NM_007979.1	NM_007979.1		14071	73661201	NM_007979.1	F9	NP_032005.1	ILMN_2660793	003120403	S	2655	CTGCTGACTCTGCTAACGTTCCACTACTTGTTGCCTCTTTTGTCTTGCAA	X	+	57283857-57283906	XqA6	Mus musculus coagulation factor IX (F9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	AW111646; Cf9; Cf-9	AW111646; Cf9; Cf-9
Mus musculus	RefSeq	ILMN_186763	ILMN_186763	TTK	NM_009445.1	NM_009445.1		22137	6678462	NM_009445.1	Ttk	NP_033471.1	ILMN_2438303	005270544	S	2548	TGGTGAAGGTCAAGATTCTTCGTCATCCAAGACTTTTGACAAAAAGAGAG	9	+	83765615-83765664	9qE2	Mus musculus Ttk protein kinase (Ttk), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	esk; Esk1; AL022661; PYT	esk; Esk1; AL022661; PYT
Mus musculus	MEEBO	ILMN_192784	ILMN_192784	DNCL2A	scl077350.1_78				21735424	NM_025947	Dncl2a		ILMN_2491303	001850195	S	20	GCATGTTATAGACATTATGACAGGCAGGCCAATAGAATGTCTGCATGTCT										
Mus musculus	RefSeq	ILMN_199892	ILMN_241782	EG667063	XM_001001207.2	XM_001001207.2		667063	149252886	XM_001001207.2	EG667063	XP_001001207.1	ILMN_2536862	004070398	S	227	ACAGATACCAGTCCAGAGAGGTTGCCGTTGTGCCCAGGACCACACAGCCA	4	+	120273436-120273439:120282090-120282135	4qD2.2	PREDICTED: Mus musculus predicted gene, EG667063, transcript variant 2 (EG667063), mRNA.					
Mus musculus	RefSeq	ILMN_219630	ILMN_219630	OLFR1161	NM_146848.1	NM_146848.1		258845	22129170	NM_146848.1	Olfr1161	NP_667059.1	ILMN_2711499	005720433	S	660	GTTTATCCTTGTCACCATACTCAAGATGCAATCATCCAGGGGCCGCCAAA	2	+	87865540-87865589	2qD	Mus musculus olfactory receptor 1161 (Olfr1161), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR174-2	MOR174-2
Mus musculus	RefSeq	ILMN_220624	ILMN_220624	ANXA8	NM_013473.3	NM_013473.3		11752	142377277	NM_013473.3	Anxa8	NP_038501.2	ILMN_2724558	002690215	S	1254	AGGTATGTGTATACCGCCCACCCTAGCATTACCTCTGAGCAAACGGAAAC	14	+	34913140-34913189	14qB	Mus musculus annexin A8 (Anxa8), mRNA.		The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC40628; Anx8; AI466995	MGC40628; Anx8; AI466995
Mus musculus	RefSeq	ILMN_193421	ILMN_225339	BC052486	XM_619827.3	XM_619827.3		228767	94367316	XM_619827.3	BC052486	XP_619827.1	ILMN_2497028	005890441	S	1407	TGTGGTTTAAATTGTAATCCTTCAGCTTCATTGTTCCCTAGCACTGGGGG	2	-	151505730-151505779	2qG3	PREDICTED: Mus musculus cDNA sequence BC052486 (BC052486), mRNA.					
Mus musculus	Riken	ILMN_207175	ILMN_207175	F830010D20RIK	ri|F830010D20|PL00005M07|AK089710|2269					AK089710	F830010D20Rik		ILMN_1216236	001340008	S	1870	CGTGTGCCACCACGCCCAGCCCAGCATTTTCAACAAATGGTGCTGGTTCA										
Mus musculus	RefSeq	ILMN_216282	ILMN_216282	CYP3A25	NM_019792.1	NM_019792.1		56388	33469130	NM_019792.1	Cyp3a25	NP_062766.1	ILMN_2928679	007570017	S	1263	TACCAATCTATCCTCTTCACCGAAATCCTGAGTACTGGCCAGAGCCTCAG	5	-	146796454-146796503	5qG3	Mus musculus cytochrome P450, family 3, subfamily a, polypeptide 25 (Cyp3a25), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	AI327008	AI327008
Mus musculus	RefSeq	ILMN_213345	ILMN_248203	LRRFIP2	NM_027742.2	NM_027742.2		71268	141803187	NM_027742.2	Lrrfip2	NP_082018.1	ILMN_2646049	006590300	S	2237	TGTGCTGTTCCGTGCGTTTTCATCTGCTGCTTACCTGTGAATGAAGCCTC	9	+	111127218-111127267	9qF3	Mus musculus leucine rich repeat (in FLII) interacting protein 2 (Lrrfip2), mRNA. XM_284541 XM_895140 XM_903006 XM_903007 XM_903009 XM_903010 XM_903013 XM_903014 XM_915575 XM_923789 XM_923793 XM_923805 XM_923809 XM_923826 XM_923831 XM_989563 XM_989592 XM_989625 XM_989676 XM_989754 XM_989784 XM_989823 XM_989850		The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]		5133400F20Rik; AI850587	5133400F20Rik; AI850587
Mus musculus	RefSeq	ILMN_221215	ILMN_221215	LYRM2	NM_175364.2	NM_175364.2		108755	31341706	NM_175364.2	Lyrm2	NP_780573.1	ILMN_2806880	006180753	S	1035	CTTCAGGTGTGACATGGTTTGATAACCATAAGACTGAGGTCTCGCGGAGC	4	+	33130578-33130627	4qA5	Mus musculus LYR motif containing 2 (Lyrm2), mRNA.				2610208E05Rik	2610208E05Rik
Mus musculus	RefSeq	ILMN_190570	ILMN_317593	V2R6	XM_001478380.1	XM_001478380.1		22312	149269036	XM_001478380.1	V2r6	XP_001478430.1	ILMN_2471324	001820167	S	1828	GCTCTGAGTTACACTTTGCTCATCACACTCAAATTCTGTTTCCTATGTTC				17qA3.2	PREDICTED: Mus musculus vomeronasal 2, receptor, 6 (V2r6), mRNA.					
Mus musculus	RefSeq	ILMN_198214	ILMN_198214	LOC381118	XM_358509.1	XM_358509.1			38082930	XM_358509.1	LOC381118		ILMN_1242124	001570253	S	279	GAGGTTTTCTTTTTCCACTCACACGGCGGAGAGCTGCGGGACGAACCCCT										
Mus musculus	RefSeq	ILMN_186788	ILMN_186788	TPI1	NM_009415.1	NM_009415.1		21991	6678412	NM_009415.1	Tpi1	NP_033441.1	ILMN_1231447	004920520	S	234	GGCCAGTGGAGAGAGCCGTGCGTTTGTACTGACCTTCAGAGACTTGAGCC	6	-	124764147-124764196	6qF2	Mus musculus triosephosphate isomerase 1 (Tpi1), mRNA.		The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glyceraldehyde-3-phosphate, an important intermediate in glycolysis [goid 19682] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-glyceraldehyde 3-phosphate = glycerone phosphate [goid 4807] [evidence IMP]; Catalysis of the reaction: D-glyceraldehyde 3-phosphate = glycerone phosphate [goid 4807] [evidence IDA]	Tpi; Tpi-1; AI255506	Tpi; Tpi-1; AI255506
Mus musculus	RefSeq	ILMN_186788	ILMN_186788	TPI1	NM_009415.1	NM_009415.1		21991	6678412	NM_009415.1	Tpi1	NP_033441.1	ILMN_1230137	006110170	S	1519	CCCCCACGGTGCCAAAGCCCCTGTATTGTGTTTGTGAACCATCCTACATG	6	-	124760758-124760807	6qF2	Mus musculus triosephosphate isomerase 1 (Tpi1), mRNA.		The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glyceraldehyde-3-phosphate, an important intermediate in glycolysis [goid 19682] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-glyceraldehyde 3-phosphate = glycerone phosphate [goid 4807] [evidence IMP]; Catalysis of the reaction: D-glyceraldehyde 3-phosphate = glycerone phosphate [goid 4807] [evidence IDA]	Tpi; Tpi-1; AI255506	Tpi; Tpi-1; AI255506
Mus musculus	RefSeq	ILMN_186788	ILMN_186788	TPI1	NM_009415.1	NM_009415.1		21991	6678412	NM_009415.1	Tpi1	NP_033441.1	ILMN_2932359	003990477	S	1457	TCAGAGCTTTCGGGTCTGAATTCGGTATACATGAGACCCTAAGAGGCCTG	6	-	124760820-124760869	6qF2	Mus musculus triosephosphate isomerase 1 (Tpi1), mRNA.		The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glyceraldehyde-3-phosphate, an important intermediate in glycolysis [goid 19682] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-glyceraldehyde 3-phosphate = glycerone phosphate [goid 4807] [evidence IMP]; Catalysis of the reaction: D-glyceraldehyde 3-phosphate = glycerone phosphate [goid 4807] [evidence IDA]	Tpi; Tpi-1; AI255506	Tpi; Tpi-1; AI255506
Mus musculus	Riken	ILMN_205743	ILMN_205743	A330096O15RIK	ri|A330096O15|PX00133H09|AK039728|1410					AK039728	A330096O15Rik		ILMN_1237044	007210626	S	1090	AGGATAGAGCCTTTGCCCTGTGGGAGGGACAATGTAGAGGCCATTCCTCT										
Mus musculus	RefSeq	ILMN_219819	ILMN_219819	FOXM1	NM_008021.4	NM_008021.4		14235	124517696	NM_008021.4	Foxm1	NP_032047.4	ILMN_1239314	001580356	S	3108	GGTGTTTCTCTGATAGTGTTCCCAATCATGCCAGGGAGTCTACCACTGAG	6	+	128324647-128324696	6qF3	Mus musculus forkhead box M1 (Foxm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]	AA408308; HFH-11B; Mpm2; Fkh16; AW554517; WIN; Foxm1b; MPHOSPH2	AA408308; HFH-11B; Mpm2; Fkh16; AW554517; WIN; Foxm1b; MPHOSPH2
Mus musculus	RefSeq	ILMN_225258	ILMN_225258	RASL11A	NM_026864.1	NM_026864.1		68895	110625727	NM_026864.1	Rasl11a	NP_081140.1	ILMN_2932662	004230136	S	843	TCCAAAGCGAAAGCGTCCTCCGCCCTGGGGTGATCCAGCTCAGATAGACT	5	+	147659019-147659051:147659052-147659068	5qG3	Mus musculus RAS-like, family 11, member A (Rasl11a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC144485; AI852031; 1110065D03Rik	MGC144485; AI852031; 1110065D03Rik
Mus musculus	RefSeq	ILMN_222866	ILMN_225258	RASL11A	NM_026864.1	NM_026864.1		68895	110625727	NM_026864.1	Rasl11a	NP_081140.1	ILMN_2755936	002850521	S	579	GTGGGAAACAAAGGAGACCTTTTGCATGCCCGGCAGGTGCAGACACACGA	5	+	147658755-147658804	5qG3	Mus musculus RAS-like, family 11, member A (Rasl11a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC144485; AI852031; 1110065D03Rik	MGC144485; AI852031; 1110065D03Rik
Mus musculus	RefSeq	ILMN_209590	ILMN_209590	BCL2	NM_009741.2	NM_009741.2		12043	46048135	NM_009741.2	Bcl2	NP_033871.1	ILMN_1249021	006420612	S	6757	GGGCAGCTTTTAAGGTTGATACTTTTAGGCGTGGCTGATGCCTATAGCAC	1	-	108365916-108365965	1qE2.1	Mus musculus B-cell leukemia/lymphoma 2 (Bcl2), transcript variant 1, mRNA.	The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin [goid 5955] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IDA]	An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IDA]; Branching of the ureteric bud [goid 1658] [evidence IGI]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; Any process that modulates the frequency, rate or extent of viral genome replication [goid 45069] [evidence IDA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [evidence IDA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IGI]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IGI]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of melanocyte differentiation [goid 45636] [evidence IMP]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence ISO]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence ISO]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus [goid 42221] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46671] [evidence IMP]; The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 6582] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [evidence ISO]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence ISO]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any process that modulates the frequency, rate or extent of nitrogen utilization [goid 6808] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus [goid 9605] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence ISO]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IGI]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus [goid 48545] [evidence IMP]; The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1776] [evidence IMP]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The regrowth of axons following their loss or damage [goid 31103] [evidence IDA]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence IMP]; Any process that modulates the activity of an enzyme [goid 50790] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that activates or increases the deposition of coloring matter occurring during development [goid 48087] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; The process by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48547] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that modulates the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43067] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IDA]; Any process that activates or increases the deposition of coloring matter occurring during development [goid 48087] [evidence IMP]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IGI]; The process by which an immature T cell becomes committed to becoming a CD8-positive, alpha-beta T cell [goid 43375] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence ISO]; The process whereby a precursor cell type acquires the specialized features of a lymphoid progenitor cell. Lymphoid progenitor cells include progenitor cells for any of the lymphoid lineages [goid 2320] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence ISO]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IMP]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of neuron maturation [goid 14042] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IGI]; The process whose specific outcome is the progression of the cochlear nucleus over time, from its formation to the mature structure [goid 21747] [evidence IMP]; Any process that activates, maintains or increases the rate of skeletal muscle fiber development. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48743] [evidence IMP]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IMP]; The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process [goid 2520] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IGI]; The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 48599] [evidence IMP]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The process whereby a lymphoid progenitor cell becomes committed to become any type of B cell [goid 2326] [evidence IMP]; The process by which a lymphoid progenitor cell becomes committed to becoming any type of T cell [goid 2360] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [evidence IDA]; The process aimed at the progression of a mesenchymal cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14031] [evidence IMP]; The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process [goid 2520] [evidence IMP]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a pigment granule [goid 48753] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of smooth muscle cell migration [goid 14911] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence ISO]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a myeloid cell apoptosis [goid 33033] [evidence IDA]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of osteoblast proliferation [goid 33689] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]; The process by which the anatomical structures of a gland are generated and organized. Morphogenesis pertains to the creation of form [goid 22612] [evidence IMP]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IMP]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IGI]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	AW986256; D830018M01Rik; D630044D05Rik; C430015F12Rik; Bcl-2	AW986256; D830018M01Rik; D630044D05Rik; C430015F12Rik; Bcl-2
Mus musculus	RefSeq	ILMN_195411	ILMN_313118	LOC100046128	XM_001475621.1	XM_001475621.1		100046128	149262191	XM_001475621.1	LOC100046128	XP_001475671.1	ILMN_3163527	006200148	A	255	GTCAGTCAACACCTGGGGTCGGGCTATGTTTAACTTGGATAACTTCCCCG					PREDICTED: Mus musculus similar to sodium-coupled citrate transporter (LOC100046128), mRNA.					
Mus musculus	Riken	ILMN_205840	ILMN_205840	A730040I05RIK	ri|A730040I05|PX00149J08|AK042925|1437					AK042925	A730040I05Rik		ILMN_1245076	004250605	S	1114	CCATAGCAAAGATTCAGCCAGCAAGGCTCTGAGGGGGCGTGTTCCTGCTG										
Mus musculus	RefSeq	ILMN_217859	ILMN_247468	BTAF1	NM_001080706.1	NM_001080706.1		107182	123858773	NM_001080706.1	Btaf1	NP_001074175.1	ILMN_2688492	001660093	S	7134	ACTTGAGTAGCCTTGACAACCATCCTGTAATCCTGAACCTAGCATTCCAC	19	+	37087172-37087221	19qC2	Mus musculus BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae) (Btaf1), mRNA.				TAF170; E430027O22Rik; AI414500; AI447930	TAF170; E430027O22Rik; AI414500; AI447930
Mus musculus	RefSeq	ILMN_215231	ILMN_215231	D330022A01RIK	NM_177090.3	NM_177090.3		320169	142351769	NM_177090.3	D330022A01Rik	NP_796064.1	ILMN_1219268	000870239	S	1312	GCCACCCTCTTAGTAACTGGCTCTTAGAAACTCTAACCCAATATTCACGC	9	+	107897069-107897118	9qF2	Mus musculus RIKEN cDNA D330022A01 gene (D330022A01Rik), mRNA.					
Mus musculus	Riken	ILMN_207045	ILMN_207045	6430514I22RIK	ri|6430514I22|PX00045D15|AK078216|3794					AK078216	6430514I22Rik		ILMN_1216872	005090564	S	3716	CATCAAGAGGAAGGCGCAGAGGAGCAAGGAAAGCCAGCATACTGCAGGGG										
Mus musculus	RefSeq	ILMN_209830	ILMN_209830	ERGIC3	NM_025516.4	NM_025516.4		66366	146134951	NM_025516.4	Ergic3	NP_079792.1	ILMN_2599615	003180450	S	112	CGTCAGTGGCCTTCTCATGCTCCTGCTTTTCCTATCGGAGTTGCAGTATT				2qH1	Mus musculus ERGIC and golgi 3 (Ergic3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		NY-BR-84; 2310015B14Rik; DKFZp547A2190; CGI-54; D2Ucla1; Sdbcag84; AV318804	NY-BR-84; 2310015B14Rik; DKFZp547A2190; CGI-54; D2Ucla1; Sdbcag84; AV318804
Mus musculus	RefSeq	ILMN_219838	ILMN_219838	UGT2A3	NM_028094.2	NM_028094.2		72094	141803411	NM_028094.2	Ugt2a3	NP_082370.1	ILMN_2714195	005720273	S	1554	TTGTGTGTCAAAAACTTTATATGAAAGAAAGTAAGAAAATGGGGAACAGA	5	-	87754491-87754540	5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide A3 (Ugt2a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	2010321J07Rik	2010321J07Rik
Mus musculus	RefSeq	ILMN_209182	ILMN_238970	CEACAM5	NM_028480.2	NM_028480.2		73250	142384595	NM_028480.2	Ceacam5	NP_082756.1	ILMN_1232979	006560059	S	1179	GGGGAGTGCATACAGTTCAAGAGAGTTTATATACAACAACGGATCCATGC	7	+	18332662-18332711	7qA2	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 5 (Ceacam5), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		1600029H12Rik	1600029H12Rik
Mus musculus	RefSeq	ILMN_209514	ILMN_209514	MT1	NM_013602.2	NM_013602.2		17748	34328216	NM_013602.2	Mt1	NP_038630.1	ILMN_2596522	005220279	S	333	ACAGTTCCACCCTGTTTACTAAACCCCCGTTTTCTACCGAGTACGTGAAT	8	+	96704156-96704205	8qC5	Mus musculus metallothionein 1 (Mt1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	A series of molecular signals mediated by the detection of nitric oxide (NO) [goid 7263] [evidence IMP]; The regulation of the levels, transport, and metabolism of metal ions within a cell or between a cell and its external environment [goid 6875] [evidence IDA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IMP]; Any process that reduce or remove the toxicity of copper ion. These include transport of copper away from sensitive areas and to compartments or complexes whose purpose is sequestration of copper ion [goid 10273] [evidence IGI]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IDA]	MT-I; Mt-1	MT-I; Mt-1
Mus musculus	RefSeq	ILMN_216309	ILMN_216309	HPN	NM_008281.2	NM_008281.2		15451	142377829	NM_008281.2	Hpn	NP_032307.1	ILMN_1221781	006550427	S	515	ATGTGCGCACTGCGGGCGCCAACGGCACATCGGGCTTCTTTTGCGTGGAC	7	-	31888358-31888407	7qB1	Mus musculus hepsin (Hpn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	AI788568; AA408042	AI788568; AA408042
Mus musculus	RefSeq	ILMN_216309	ILMN_216309	HPN	NM_008281.2	NM_008281.2		15451	142377829	NM_008281.2	Hpn	NP_032307.1	ILMN_1240252	003370059	S	1635	CCACTCAATCCCAGGGCCATTGGCCTCACCCTCCCACCCCATGTAAATAT	7	-	31883813-31883862	7qB1	Mus musculus hepsin (Hpn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	AI788568; AA408042	AI788568; AA408042
Mus musculus	Riken	ILMN_207014	ILMN_207014	CAPN2	ri|8030487N24|PX00651A17|AK078787|2366					AK078787	Capn2		ILMN_2584397	005390630	S	1267	TTAGGCCTCCCACAGACCCTTGTCTAGAAGGTGACTCATCTGGGGGGAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]		
Mus musculus	RefSeq	ILMN_247443	ILMN_247443	OLFR222	NM_001011789.1	NM_001011789.1		257962	58801343	NM_001011789.1	Olfr222	NP_001011789.1	ILMN_3005977	000580184	S	673	ATTGCTCGGGCAGTGATGAGGATCCAGTCCTCCAGGGGACGGCACAAGGC	11	-	59384518-59384567	11qB1.3	Mus musculus olfactory receptor 222 (Olfr222), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-45P	MOR256-45P
Mus musculus	RefSeq	ILMN_198396	ILMN_198396	LOC381208	XM_358526.1	XM_358526.1			38084842	XM_358526.1	LOC381208		ILMN_1213051	005900681	S	660	CGTACTGTAAGCTCTGCTTTACCCAAGGCTTCACTGGCCTGGTCCCTGGG										
Mus musculus	RefSeq	ILMN_218536	ILMN_218536	IDH3B	NM_130884.3	NM_130884.3		170718	146149248	NM_130884.3	Idh3b	NP_570954.1	ILMN_1235050	002570441	S	1335	GTTGCGACAAGGCCCAGACCCTAAGATGATAACTTTTTCCCACAGGTTCG				2qF1	Mus musculus isocitrate dehydrogenase 3 (NAD+) beta (Idh3b), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	C78231	C78231
Mus musculus	RefSeq	ILMN_191769	ILMN_224499	ZBTB16	NM_001033324.2	NM_001033324.2		235320	142382613	NM_001033324.2	Zbtb16	NP_001028496.1	ILMN_1229216	001820164	S	2107	CCTGAGAACACACAACGGTGCCTCGCCATACCAGTGTACCATCTGCACGG	9	-	48465359-48465408	9qA5.3	Mus musculus zinc finger and BTB domain containing 16 (Zbtb16), mRNA. XM_924409	A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence ISO]	The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IDA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence ISO]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The self-renewing division of a germline stem cell in the male gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the male gametes [goid 48133] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process by which the anatomical structures of leg are generated and organized. Morphogenesis pertains to the creation of form. A leg is a limb on which an animal walks and stands [goid 35110] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IMP]; The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is a transient excretory organ of the embryo [goid 1823] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfp145; PLZF; lu	Zfp145; PLZF; lu
Mus musculus	Riken	ILMN_205101	ILMN_205101	D830015G02RIK	ri|D830015G02|PX00199C22|AK052874|829					AK052874	D830015G02Rik		ILMN_1225981	003610431	S	479	TCTGCCTTGATCTGGTTGAACTCTAGCTGGGCGCGGAGGATCTTGCCCTC										
Mus musculus	RefSeq	ILMN_235029	ILMN_235029	SEMA4F	NM_011350.2	NM_011350.2		20355	31543684	NM_011350.2	Sema4f	NP_035480.2	ILMN_2998813	001470521	S	3748	GTGAGGGACCTCGAACCCCGGTGAGGATGCAGCCCTTTCCAGTTGAAGTT	6	-	82862841-82862890	6qC3	Mus musculus sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain (Sema4f), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence ISA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence ISA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221072	ILMN_314234	DEPDC2	XM_001475275.1	XM_001475275.1		76135	149233678	XM_001475275.1	Depdc2	XP_001475325.1	ILMN_1246169	004230753	S	1783	TATGGCTTTGGCCTAGAAGACAAAAACAAAGTTCCAATAATAAAATTAGT					PREDICTED: Mus musculus DEP domain containing 2 (Depdc2), mRNA.					
Mus musculus	MEEBO	ILMN_216717	ILMN_216717	4930543L23RIK	scl075171.1_240	NM_183110.1			34147102	NM_183110.1	4930543L23Rik		ILMN_2674415	005260373	S	717	CGCTGCATCTTTAGCAATAGTTACAGCAGATCCTCTTCTAGGCTACCAGG										
Mus musculus	RefSeq	ILMN_220483	ILMN_316212	LOC100044776	XM_001472871.1	XM_001472871.1		100044776	149249370	XM_001472871.1	LOC100044776	XP_001472921.1	ILMN_2722650	006330717	S	3414	GGGTTGGAAACCGTCTGACTGTAAGTGTTGGACACCTTCATAGCGTAGTG					PREDICTED: Mus musculus similar to Enhancer of polycomb homolog 2, transcript variant 1 (LOC100044776), mRNA.					
Mus musculus	RefSeq	ILMN_237099	ILMN_237099	2900006K08RIK	NM_028377.1	NM_028377.1		72873	74315972	NM_028377.1	2900006K08Rik	NP_082653.1	ILMN_2948800	000870520	S	1584	CACCCAGCAAGCGCCAGTATCAGACTCCAATAGAATGGTGTCACCCGATG	12	+	85320001-85320050	12qD1	Mus musculus RIKEN cDNA 2900006K08 gene (2900006K08Rik), mRNA.				AI427784	AI427784
Mus musculus	RefSeq	ILMN_217354	ILMN_217354	KLHL28	NM_025707.3	NM_025707.3		66689	146135082	NM_025707.3	Klhl28	NP_079983.1	ILMN_2682263	000450594	S	2320	ACTTCGGGTACTTTTAAGGATTGTAAATAACAAGTCAATCATCACAGTGC				12qC1	Mus musculus kelch-like 28 (Drosophila) (Klhl28), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810440N09Rik; 4931401E10Rik; 4122402F11Rik; MGC47075; Btbd5	2810440N09Rik; 4931401E10Rik; 4122402F11Rik; MGC47075; Btbd5
Mus musculus	RefSeq	ILMN_206521	ILMN_313381	LOC100039792	XM_001473511.1	XM_001473511.1		100039792	149259994	XM_001473511.1	LOC100039792	XP_001473561.1	ILMN_1226245	004210079	S	568	GCCTATGATGTGCAGGGTTAGCACAGAAGCAGTCACGAGAACCAAGCAGG	9	-	60357822-60357871	9qB	PREDICTED: Mus musculus hypothetical protein LOC100039792 (LOC100039792), mRNA.					
Mus musculus	RefSeq	ILMN_214152	ILMN_214152	TRMT6	NM_175113.3	NM_175113.3		66926	148747332	NM_175113.3	Trmt6	NP_780322.2	ILMN_2644845	004590255	S	2732	CTGATAAAGGCTGCTGTGATTACCAACTTTGGTTTTTATTCCTTTTTCTC				2qF2	Mus musculus tRNA methyltransferase 6 homolog (S. cerevisiae) (Trmt6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	RP23-77H16.2; AU016412; 3300001M20Rik; CGI-09; mKIAA1153; AW492787	RP23-77H16.2; AU016412; 3300001M20Rik; CGI-09; mKIAA1153; AW492787
Mus musculus	RefSeq	ILMN_214152	ILMN_214152	TRMT6	NM_175113.3	NM_175113.3		66926	148747332	NM_175113.3	Trmt6	NP_780322.2	ILMN_2694597	006450722	S	416	TTGATGATGGAAAGTCCCAGAAACTTACTCAAGATGATATAAAAGCTCTG				2qF2	Mus musculus tRNA methyltransferase 6 homolog (S. cerevisiae) (Trmt6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	RP23-77H16.2; AU016412; 3300001M20Rik; CGI-09; mKIAA1153; AW492787	RP23-77H16.2; AU016412; 3300001M20Rik; CGI-09; mKIAA1153; AW492787
Mus musculus	RefSeq	ILMN_211244	ILMN_211244	STAT4	NM_011487.1	NM_011487.1		20849	6755669	NM_011487.1	Stat4	NP_035617.1	ILMN_2792599	003170273	S	2743	ACGGACACTTTAAAGAAGGAAGCAGATGAAACTGGAGAGTGTTCTTTACC	1	+	52051491-52051540	1qC1.1	Mus musculus signal transducer and activator of transcription 4 (Stat4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211096	ILMN_211096	RBM14	NM_019869.2	NM_019869.2		56275	86262141	NM_019869.2	Rbm14	NP_063922.2	ILMN_2612477	002120653	S	2731	AGGTGGTGTTAGAAATCTTAATTCTTTTCCCTTCTTTTGTATGGACTACA	19	-	4800953-4801002	19qA	Mus musculus RNA binding motif protein 14 (Rbm14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p16; Sytip; 1300007E16Rik; p16K	p16; Sytip; 1300007E16Rik; p16K
Mus musculus	RefSeq	ILMN_211096	ILMN_211096	RBM14	NM_019869.2	NM_019869.2		56275	86262141	NM_019869.2	Rbm14	NP_063922.2	ILMN_1245292	007510097	S	477	TCACATGGAGAAGGAAGCAGATGCCAAAGCCGCCATCGCGCAGCTCAACG	19	-	4803952-4804001	19qA	Mus musculus RNA binding motif protein 14 (Rbm14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p16; Sytip; 1300007E16Rik; p16K	p16; Sytip; 1300007E16Rik; p16K
Mus musculus	RefSeq	ILMN_217901	ILMN_217901	TMEM111	NM_175101.2	NM_175101.2		66087	31341249	NM_175101.2	Tmem111	NP_780310.1	ILMN_2859294	003840192	S	1824	AAGGTGCCCAGGAGTCCTCTGACCAGGGAAGTGTTAGGGTGCCATTTCTG	6	-	113480748-113480797	6qE3	Mus musculus transmembrane protein 111 (Tmem111), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610039A15Rik; AI225901; AW260416	0610039A15Rik; AI225901; AW260416
Mus musculus	Riken	ILMN_203382	ILMN_203382	1500031K13RIK	ri|9530011F18|PX00111O08|AK035294|1972					AK035294	1500031K13Rik		ILMN_2556881	005890470	S	1821	CCTAGCATGCAACTCAACTTGTCAGATTTCAGTGGCAATCACGTTTGCCG										
Mus musculus	RefSeq	ILMN_209904	ILMN_257718	CAPRIN2	NM_181541.3	NM_181541.3		232560	124107628	NM_181541.3	Caprin2	NP_853519.2	ILMN_1256629	006110600	S	723	GAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGGGACCTTTTGGAAGG	6	-	148825003-148825052	6qG3	Mus musculus caprin family member 2 (Caprin2), mRNA. XM_001000537 XM_132976 XM_893993 XM_901208 XM_901216 XM_901219 XM_909231 XM_921186 XM_921226 XM_921237 XM_921247	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1873; AA536741; C1qdc1; Eeg1; BC025636	mKIAA1873; AA536741; C1qdc1; Eeg1; BC025636
Mus musculus	RefSeq	ILMN_209904	ILMN_257718	CAPRIN2	NM_181541.3	NM_181541.3		232560	124107628	NM_181541.3	Caprin2	NP_853519.2	ILMN_2614442	003990220	S	3392	TGTGAAGACTTTGAAGCAGAATGATAATTAGCACTAACTTTATAAATTGT	6	-	148791158-148791207	6qG3	Mus musculus caprin family member 2 (Caprin2), mRNA. XM_001000537 XM_132976 XM_893993 XM_901208 XM_901216 XM_901219 XM_909231 XM_921186 XM_921226 XM_921237 XM_921247	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1873; AA536741; C1qdc1; Eeg1; BC025636	mKIAA1873; AA536741; C1qdc1; Eeg1; BC025636
Mus musculus	RefSeq	ILMN_245322	ILMN_245322	MYOC	NM_010865.2	NM_010865.2		17926	31560807	NM_010865.2	Myoc	NP_034995.2	ILMN_2932705	007400463	S	1474	GCAGTATGATTGACTACAACCCCCTGGAGAGGAAGCTGTTTGCCTGGGAC	1	+	164579238-164579287	1qH2.1	Mus musculus myocilin (Myoc), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI957332; GLC1A; TIGR; MGC159032	AI957332; GLC1A; TIGR; MGC159032
Mus musculus	RefSeq	ILMN_215306	ILMN_215306	NAPSA	NM_008437.1	NM_008437.1		16541	6680551	NM_008437.1	Napsa	NP_032463.1	ILMN_1230302	005690500	S	1098	CATTCAGTGTTCCAAGACGCCAACGCTTCCCCCTGTCTCCTTCCACCTTG	7	+	51841089-51841138	7qB4	Mus musculus napsin A aspartic peptidase (Napsa), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	Kdap; NAP1; KAP; SNAPA; pronapsin	Kdap; NAP1; KAP; SNAPA; pronapsin
Mus musculus	RefSeq	ILMN_215306	ILMN_215306	NAPSA	NM_008437.1	NM_008437.1		16541	6680551	NM_008437.1	Napsa	NP_032463.1	ILMN_2781030	000380369	S	1322	ACAAAAACGTCGGCCCGCGCGTGGGACTGGCGCGTGCTCAGTCTCGTTCA	7	+	51842059-51842108	7qB4	Mus musculus napsin A aspartic peptidase (Napsa), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	Kdap; NAP1; KAP; SNAPA; pronapsin	Kdap; NAP1; KAP; SNAPA; pronapsin
Mus musculus	RefSeq	ILMN_215306	ILMN_215306	NAPSA	NM_008437.1	NM_008437.1		16541	6680551	NM_008437.1	Napsa	NP_032463.1	ILMN_2657867	004830551	S	408	GGGAACGCCTCCTCAGAATTTCACCGTTGTCTTTGACACGGGTTCTTCCA	7	+	51836817-51836866	7qB4	Mus musculus napsin A aspartic peptidase (Napsa), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	Kdap; NAP1; KAP; SNAPA; pronapsin	Kdap; NAP1; KAP; SNAPA; pronapsin
Mus musculus	MEEBO	ILMN_209942	ILMN_209942	MIA3	scl0338366.1_12	NM_177389.2			31341451	NM_177389.2	Mia3		ILMN_2689331	001240021	S	3872	TTATACTTCTAGCTAACCTTGTCAAATAATTTAGTGTAATCTTTGTATTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_187603	ILMN_187603	C330006A16RIK	scl19537.3.2_222						C330006A16Rik		ILMN_2445548	007200189	S	15	GTGGGTGTGTCAGGGCTGGTGGTGGGAGGGAATGATGGGACCTTGTCACT										
Mus musculus	RefSeq	ILMN_209322	ILMN_209322	ADAM17	NM_009615.5	NM_009615.5		11491	110347484	NM_009615.5	Adam17	NP_033745.4	ILMN_2594718	005900653	S	4168	GCTCAGGGCATATTCTATAGCTGTGGCATTGATGATACCTGCCTCAGTCA	12	-	21329562-21329611	12qA1.3	Mus musculus a disintegrin and metallopeptidase domain 17 (Adam17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Tace; CD156b	Tace; CD156b
Mus musculus	RefSeq	ILMN_201489	ILMN_209322	ADAM17	NM_009615.5	NM_009615.5		11491	110347484	NM_009615.5	Adam17	NP_033745.4	ILMN_1243942	006510482	S	2937	GCTGTTAAGTCTTCAGTCTGTTTTTCTGTACCCTCTGACTACAGTGAAGC	12	-	21330793-21330842	12qA1.3	Mus musculus a disintegrin and metallopeptidase domain 17 (Adam17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Tace; CD156b	Tace; CD156b
Mus musculus	RefSeq	ILMN_230902	ILMN_230902	1700029I01RIK	NM_027285.2	NM_027285.2		70005	66955873	NM_027285.2	1700029I01Rik	NP_081561.2	ILMN_2882698	002350612	S	33	GTTCTTCTCTGGTAAAATTCCAGGTGGAAGAAGGGGAAGTGCAAACTTGG	4	+	145056234-145056244:145081454-145081492	4qE1	Mus musculus RIKEN cDNA 1700029I01 gene (1700029I01Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208854	ILMN_208854	CADPS2	NM_153163.3	NM_153163.3		320405	118200357	NM_153163.3	Cadps2	NP_694803.3	ILMN_2590164	001090220	S	3128	CCTCTTAATCTTCCACAGATTCCTAGCTTTTCTACTCCTCCGTGGATGGC	6	-	23278800-23278849	6qA3.1	Mus musculus Ca2+-dependent activator protein for secretion 2 (Cadps2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of exocytosis [goid 45921] [evidence IDA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Caps2; Cpd2; A230044C21Rik	Caps2; Cpd2; A230044C21Rik
Mus musculus	RefSeq	ILMN_208854	ILMN_208854	CADPS2	NM_153163.3	NM_153163.3		320405	118200357	NM_153163.3	Cadps2	NP_694803.3	ILMN_2998313	000580369	S	4708	GTACCATGTCGCCAGGTGTGCTTCCAACACAAGTGTAACAGCTTGCCGGC	6	-	23212863-23212912	6qA3.1	Mus musculus Ca2+-dependent activator protein for secretion 2 (Cadps2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of exocytosis [goid 45921] [evidence IDA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Caps2; Cpd2; A230044C21Rik	Caps2; Cpd2; A230044C21Rik
Mus musculus	RefSeq	ILMN_220737	ILMN_249028	RREB1	NM_026830.1	NM_026830.1		68750	85719310	NM_026830.1	Rreb1	NP_081106.1	ILMN_1234457	000020564	S	1049	AGCGCAGGCGGTTGTCCTCCAAAAGGAAGCTGAGTCACGATGCCGAGTCA	13	+	38007957-38008006	13qA3.3	Mus musculus ras responsive element binding protein 1 (Rreb1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1110037N09Rik; AA414966; B930013M22Rik	1110037N09Rik; AA414966; B930013M22Rik
Mus musculus	RefSeq	ILMN_249028	ILMN_249028	RREB1	NM_026830.1	NM_026830.1		68750	85719310	NM_026830.1	Rreb1	NP_081106.1	ILMN_3122124	004760100	A	3911	CCACCCCCACTGACACCACAAGCTCTAAAGAATCCAGTGAGCCACCCCCT	13	+	38023889-38023938	13qA3.3	Mus musculus ras responsive element binding protein 1 (Rreb1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1110037N09Rik; AA414966; B930013M22Rik	1110037N09Rik; AA414966; B930013M22Rik
Mus musculus	RefSeq	ILMN_218435	ILMN_227037	SNX7	NM_029655.2	NM_029655.2		76561	142359889	NM_029655.2	Snx7	NP_083931.1	ILMN_2760244	000160253	S	1301	GGCTGTGCCCTTTACAAAGAGGATGACAAATGATTTTTGCACTGTCTGGA	3	-	117485093-117485142	3qG1	Mus musculus sorting nexin 7 (Snx7), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC107328; 2510028H01Rik	MGC107328; 2510028H01Rik
Mus musculus	RefSeq	ILMN_197102	ILMN_197102	LOC381326	XM_355275.1	XM_355275.1			38074094	XM_355275.1	LOC381326		ILMN_1254448	002710603	S	985	GCGGCAGGAGTTGGGTGACAGTTTGGATGATGAGATCGCCGTGTAGGTGC										
Mus musculus	MEEBO	ILMN_215310	ILMN_215310	A530054K11RIK	scl00212281.1_147				46849816	NM_183146	A530054K11Rik		ILMN_2657929	007000626	S	398	GGCAAAGTTTTTGAGTGGACCAAAGTGTTCCAAAATCATGAGATGCTTTA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_205673	ILMN_231224	SHANK1	XM_620487.3	XM_620487.3		243961	94380262	XM_620487.3	Shank1	XP_620487.2	ILMN_2574380	006770612	S	3358	GAGGACCTCCTCCCTGCAGCGGCAGAGGCAGTATAGAATAGTGGTTAAGA				7qB4	PREDICTED: Mus musculus SH3/ankyrin domain gene 1, transcript variant 2 (Shank1), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]				
Mus musculus	RefSeq	ILMN_210121	ILMN_210121	ANK	NM_020332.3	NM_020332.3		11732	142365627	NM_020332.3	Ank	NP_065065.2	ILMN_1232621	003800670	S	3319	CATTTCCATTTCTAGATACCCAGTGTCCCTCATATGTGCCCACCATGGGA	15	+	27524485-27524534	15qB1	Mus musculus progressive ankylosis (Ank), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites [goid 19867] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IMP]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of phosphate (PO4 3-) ions from one side of a membrane to the other [goid 15114] [evidence IEA]; Catalysis of the transfer of inorganic diphosphate across a membrane [goid 30504] [evidence IDA]	mKIAA1581; D15Ertd221e	mKIAA1581; D15Ertd221e
Mus musculus	RefSeq	ILMN_199980	ILMN_199980	LOC384140	XM_357447.1	XM_357447.1			38079523	XM_357447.1	LOC384140		ILMN_2537166	006400170	S	195	AGAAATAGAACTGGAGAGGCTCACCACAGAGCTGCACCTCCTTACCCTGA										
Mus musculus	RefSeq	ILMN_221361	ILMN_221361	0610009B22RIK	NM_025319.2	NM_025319.2		66050	141801968	NM_025319.2	0610009B22Rik	NP_079595.1	ILMN_2734484	006280440	S	403	TCTTCACTGACGTCTACGACTTATACATCAAATTTGCCATGAATCCCTTT	11	-	51499229-51499278	11qB1.3	Mus musculus RIKEN cDNA 0610009B22 gene (0610009B22Rik), mRNA.				RP23-79E13.7	RP23-79E13.7
Mus musculus	RefSeq	ILMN_193836	ILMN_231356	LOC665432	XM_976900.1	XM_976900.1		665432	94377291	XM_976900.1	LOC665432	XP_981994.1	ILMN_2500873	007320397	S	209	ATCAACAGCCTCTTGATCAAATAGACATGGTCAAGGAGAGATTCTCAGCT	6	+	41145995-41146044		PREDICTED: Mus musculus similar to T-cell receptor beta chain V region 3H.25 precursor (LOC665432), mRNA.					
Mus musculus	RefSeq	ILMN_189847	ILMN_253993	ZDHHC22	NM_001080943.2	NM_001080943.2		238331	142384075	NM_001080943.2	Zdhhc22	NP_001074412.1	ILMN_1218246	004230392	S	676	AGAGCCCGACCCTGGCGCAAGAACTTACAGGAGGTCTTCGGAAAGAGGTG	12	-	88324397-88324446	12qD2	Mus musculus zinc finger, DHHC-type containing 22 (Zdhhc22), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC157624; Gm262	MGC157624; Gm262
Mus musculus	Riken	ILMN_204207	ILMN_204207	B230217C12RIK	ri|9530081E18|PX00113P12|AK035650|1860					AK035650	B230217C12Rik		ILMN_1252991	002940551	S	1666	CCCGTGCTAGCCAAGTACTCTACCAGCCCCAGCCCAAGACCCTTACATCT										
Mus musculus	Riken	ILMN_204918	ILMN_204918	CSMD1	ri|C230009N10|PX00173I15|AK048698|2465					AK048698	Csmd1		ILMN_2568620	003390142	S	1899	GGTTGGCTTGCATTGATAAGTGCCCTCCCCCAATACACTAGGGGTGACCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_222801	ILMN_222801	GABRG2	NM_008073.2	NM_008073.2		14406	118131010	NM_008073.2	Gabrg2	NP_032099.1	ILMN_1252147	007400280	S	1831	GCACTTTCTAAGTCCAACGATATAATCCCCTATGTGGTCACCGAATGTGT	11	-	41725710-41725759	11qA5	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 (Gabrg2), transcript variant 1, mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]	BB128510; AI851231; GABAA-R; Gabrg-2; gamma2	BB128510; AI851231; GABAA-R; Gabrg-2; gamma2
Mus musculus	RefSeq	ILMN_222801	ILMN_222801	GABRG2	NM_008073.2	NM_008073.2		14406	118131010	NM_008073.2	Gabrg2	NP_032099.1	ILMN_2755026	003440669	S	1705	CGGATCTTCTTCCCTACCGCCTTTTGCTTGTTCAATCTTGTTTACTGGGT	11	-	41725836-41725885	11qA5	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 (Gabrg2), transcript variant 1, mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]	BB128510; AI851231; GABAA-R; Gabrg-2; gamma2	BB128510; AI851231; GABAA-R; Gabrg-2; gamma2
Mus musculus	RefSeq	ILMN_216248	ILMN_216248	4930568D16RIK	XM_130220.4	XM_130220.4		75859	94366402	XM_130220.4	4930568D16Rik	XP_130220.3	ILMN_2668942	006280021	S	1048	GATAGCTTGGAAACCATAAATCATACTATGGTTGTGCCCTGGGGTTTATG	2	-	35209867-35209898:35209899-35209916	2qB	PREDICTED: Mus musculus RIKEN cDNA 4930568D16 gene (4930568D16Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192399	ILMN_220246	ACOT12	NM_028790.3	NM_028790.3		74156	146141132	NM_028790.3	Acot12	NP_083066.1	ILMN_2487730	004890682	S	1204	GCCCACAAGCTTTTCAACCTTAACAGATATGGCATCTTGCTCCTCCAGGG				13qC3	Mus musculus acyl-CoA thioesterase 12 (Acot12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence TAS]; The chemical reactions and pathways involving acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis [goid 6084] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + H2O = CoA + acetate [goid 3986] [evidence IDA]	AV027244; mCACH-1; 4930449F15Rik; Cach; 1300004O04Rik	AV027244; mCACH-1; 4930449F15Rik; Cach; 1300004O04Rik
Mus musculus	RefSeq	ILMN_192785	ILMN_231250	5430427G11RIK	XM_990419.1	XM_990419.1		71414	94388171	XM_990419.1	5430427G11Rik	XP_995513.1	ILMN_2491318	007210292	S	1171	TTGGGAAGAAAAAAGTAACATTAAGATCAGTAATATAAAAATAATAAACG					PREDICTED: Mus musculus RIKEN cDNA 5430427G11 gene (5430427G11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210990	ILMN_210990	GALR2	NM_010254.3	NM_010254.3		14428	142378655	NM_010254.3	Galr2	NP_034384.2	ILMN_2611343	001940468	S	1768	GAACCTTCTGTTATTAAACTGCACAGATTGCGAGAGTGGTGACATAGCCC	11	+	116145080-116145129	11qE2	Mus musculus galanin receptor 2 (Galr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with galanin to initiate a change in cell activity [goid 4966] [evidence IEA]	MGC151357; mGalR; MGC151359	MGC151357; mGalR; MGC151359
Mus musculus	Riken	ILMN_202068	ILMN_202068	2700004E22RIK	ri|2700004E22|ZX00062H10|AK012209|1116					AK012209	2700004E22Rik		ILMN_1225259	006860201	S	791	GTGGTGTGCAACTTCAATCCCAACGCACTGGAGGCAGAGACAAGCAGATC										
Mus musculus	RefSeq	ILMN_189375	ILMN_322600	LOC100046844	XM_001477508.1	XM_001477508.1		100046844	149253025	XM_001477508.1	LOC100046844	XP_001477558.1	ILMN_1248357	004220041	S	185	CCATTGAAGGTGTTCGGCTACCAGCCAGACCCTATAAGCTACCAGACAGC					PREDICTED: Mus musculus similar to transmembrane protein 35 (LOC100046844), mRNA.					
Mus musculus	MEEBO	ILMN_186335	ILMN_186335	COX17	scl0012856.1_240						Cox17		ILMN_2434652	007650121	S	15	GCAAACCCAATAACCGCTTGATGCGGCCTAGTAGGCGGGGCCCTTAAGAA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IEA]	The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]	Increases the activity of an enzyme [goid 8047] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Assists in the delivery of copper ions to target proteins or compartments [goid 16531] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199219	ILMN_199219	LOC380731	XM_358413.1	XM_358413.1			38091865	XM_358413.1	LOC380731		ILMN_2534469	004150491	S	569	GCAGAACCTGTACAAGTTTCTAGCAAATGATGGGATCGAGCTCACAGAGA										
Mus musculus	RefSeq	ILMN_189343	ILMN_189343	V1RD4	NM_030739.2	NM_030739.2		81014	110431361	NM_030739.2	V1rd4	NP_109664.2	ILMN_2498183	007210397	S	2426	GGTGGAACAACAGTATGAACTAACCACTACCCTCCCCGCCCCACAGAGCT	7	-	5360696-5360745	7qA1	Mus musculus vomeronasal 1 receptor, D4 (V1rd4), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	V3R4	V3R4
Mus musculus	RefSeq	ILMN_223292	ILMN_223292	PADI6	NM_153106.2	NM_153106.2		242726	119372293	NM_153106.2	Padi6	NP_694746.2	ILMN_1216003	006770326	S	2143	CAGTACGGATGGCCTTTGCCATAGATAGTAGTGGGTGCGAGCGTTGTTGT	4	-	140287074-140287123	4qD3	Mus musculus peptidyl arginine deiminase, type VI (Padi6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cytoskeletal structure made from intermediate filaments, typically organized in the cytosol as an extended system that stretches from the nuclear envelope to the plasma membrane. Some intermediate filaments run parallel to the cell surface, while others traverse the cytosol; together they form an internal framework that helps support the shape and resilience of the cell [goid 45111] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of peptidyl-arginine to form peptidyl-citrulline [goid 18101] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3 [goid 4668] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ePAD; Padi5	ePAD; Padi5
Mus musculus	RefSeq	ILMN_198987	ILMN_198987	LOC215728	XM_136903.3	XM_136903.3			38090355	XM_136903.3	LOC215728		ILMN_2533641	006510451	S	688	GCACTGTAAGGAAAACCAGGAGCCTACAGGTCAGTTCCTCTTCTGTCAGC										
Mus musculus	RefSeq	ILMN_220185	ILMN_220185	FOSL2	NM_008037.3	NM_008037.3		14284	40789304	NM_008037.3	Fosl2	NP_032063.2	ILMN_2718801	002260484	S	1084	GCAGAAGCAGTAGCAGTGGGGACCAGTCATCAGACTCCTTGAACTCCCCC	5	+	32455495-32455544	5qB1	Mus musculus fos-like antigen 2 (Fosl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	Fra-2	Fra-2
Mus musculus	RefSeq	ILMN_220185	ILMN_220185	FOSL2	NM_008037.3	NM_008037.3		14284	40789304	NM_008037.3	Fosl2	NP_032063.2	ILMN_2768924	003520520	S	1327	GGGACACGCCCTCCCTCATTCATCTTGCAAGCGAAGCGAATCCTTTTTCT	5	+	32455738-32455787	5qB1	Mus musculus fos-like antigen 2 (Fosl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	Fra-2	Fra-2
Mus musculus	RefSeq	ILMN_220185	ILMN_220185	FOSL2	NM_008037.3	NM_008037.3		14284	40789304	NM_008037.3	Fosl2	NP_032063.2	ILMN_1252481	007400044	S	5461	TTAACGGTGAAACGGCCCTAGGAGGGTCGCTCTAGTTGAACTCTCCAGGC	5	+	32459872-32459921	5qB1	Mus musculus fos-like antigen 2 (Fosl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	Fra-2	Fra-2
Mus musculus	Riken	ILMN_207127	ILMN_207127	F630050F06RIK	ri|F630050F06|PL00002B16|AK089231|2478					AK089231	F630050F06Rik		ILMN_1238764	000940762	S	2121	AGGGGATGTGTAGGCTGGGGGAGGGGGAACTCATCAACAGTCTCACCAAG										
Mus musculus	RefSeq	ILMN_210288	ILMN_239726	UPF1	NM_030680.1	NM_030680.1		19704	13507600	NM_030680.1	Upf1	NP_109605.1	ILMN_2604108	006200070	S	3400	TTTCACAGGGTGCCCTCACACAGGGTTACGTGTCCATGAGCCAGCCCTCT	8	-	72856900-72856949	8qB3.3	Mus musculus UPF1 regulator of nonsense transcripts homolog (yeast) (Upf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	Rent1; PNORF-1; Upflp; B430202H16Rik; NORF1	Rent1; PNORF-1; Upflp; B430202H16Rik; NORF1
Mus musculus	RefSeq	ILMN_239726	ILMN_239726	UPF1	NM_030680.1	NM_030680.1		19704	13507600	NM_030680.1	Upf1	NP_109605.1	ILMN_2933692	005420086	S	4246	AAACCTGAGAGATGCGAGAAGCTTCCGGGAAAGGCAGCGCTGAGAAGCCT	8	-	72855684-72855733	8qB3.3	Mus musculus UPF1 regulator of nonsense transcripts homolog (yeast) (Upf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	Rent1; PNORF-1; Upflp; B430202H16Rik; NORF1	Rent1; PNORF-1; Upflp; B430202H16Rik; NORF1
Mus musculus	RefSeq	ILMN_210288	ILMN_239726	UPF1	NM_030680.1	NM_030680.1		19704	13507600	NM_030680.1	Upf1	NP_109605.1	ILMN_2740755	001770605	S	4382	TGAGCACGGCCTGCGGGTTCTTCCCCATCGAGGGTGGAGGCCTCATTGCT	8	-	72855548-72855597	8qB3.3	Mus musculus UPF1 regulator of nonsense transcripts homolog (yeast) (Upf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	Rent1; PNORF-1; Upflp; B430202H16Rik; NORF1	Rent1; PNORF-1; Upflp; B430202H16Rik; NORF1
Mus musculus	RefSeq	ILMN_199491	ILMN_199491	LOC383561	XM_357125.1	XM_357125.1			38073366	XM_357125.1	LOC383561		ILMN_1237246	007200221	S	295	CTTGCTATTGCTGTGGATCGGTACCTCCGAGTCAAGATCCCTCTCCGGTG										
Mus musculus	RefSeq	ILMN_193478	ILMN_193478	UHRF1	NM_010931.2	NM_010931.2		18140	31981595	NM_010931.2	Uhrf1	NP_035061.2	ILMN_2517041	004560397	S	3379	CCATTTACTACAGGCAGACTGGACAGCACAGTTCTAAGGGTTGTGTTTTG	17	+	56462798-56462847	17qD	Mus musculus ubiquitin-like, containing PHD and RING finger domains, 1 (Uhrf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AL022808; Np95; ICBP90; RNF106	AL022808; Np95; ICBP90; RNF106
Mus musculus	RefSeq	ILMN_193478	ILMN_193478	UHRF1	NM_010931.2	NM_010931.2		18140	31981595	NM_010931.2	Uhrf1	NP_035061.2	ILMN_2497581	002360379	S	684	CTCGGAGGATGACATCATGTACCATGTCAAGTATGATGACTATCCAGAGC	17	+	56450229-56450259:56451477-56451495	17qD	Mus musculus ubiquitin-like, containing PHD and RING finger domains, 1 (Uhrf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AL022808; Np95; ICBP90; RNF106	AL022808; Np95; ICBP90; RNF106
Mus musculus	Riken	ILMN_205463	ILMN_205463	A530050E01RIK	ri|A530050E01|PX00141J21|AK040949|844					AK040949	A530050E01Rik		ILMN_1214783	002320301	S	595	CTCCTTGGGGTCCCGATACTGAGTGTGGCATGGAGACAAAGGTCCAAATG										
Mus musculus	MEEBO	ILMN_214775	ILMN_214775	KRT2-1	scl46695.7.50_23	NM_008473.1			6678642	NM_008473.1	Krt2-1		ILMN_2651772	004610040	S	1491	GCTGATGAACACTAAGCTGGCCCTGGACATGGAGATTGCCACATACAAGA										
Mus musculus	RefSeq	ILMN_217480	ILMN_217480	SUCLG1	NM_019879.2	NM_019879.2		56451	142384185	NM_019879.2	Suclg1	NP_063932.1	ILMN_2683681	002480091	S	1138	CCAGGCAAGTTTTAGAATGTCCTAAATTGAGCTATTTTCACTTACTGTGT	6	+	73226815-73226864	6qC1	Mus musculus succinate-CoA ligase, GDP-forming, alpha subunit (Suclg1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ADP + phosphate + acetyl-CoA + oxaloacetate = ATP + citrate + CoA [goid 3878] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate [goid 4775] [evidence IEA]; Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate [goid 4776] [evidence IEA]	Sucla1; 1500000I01Rik	Sucla1; 1500000I01Rik
Mus musculus	RefSeq	ILMN_217480	ILMN_217480	SUCLG1	NM_019879.2	NM_019879.2		56451	142384185	NM_019879.2	Suclg1	NP_063932.1	ILMN_1216493	001240414	S	83	GCAACAGAATGGGATACGACACGGGTCTTACACAGCCTCTCGGAAACATA	6	+	73206166-73206215	6qC1	Mus musculus succinate-CoA ligase, GDP-forming, alpha subunit (Suclg1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ADP + phosphate + acetyl-CoA + oxaloacetate = ATP + citrate + CoA [goid 3878] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate [goid 4775] [evidence IEA]; Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate [goid 4776] [evidence IEA]	Sucla1; 1500000I01Rik	Sucla1; 1500000I01Rik
Mus musculus	MEEBO	ILMN_215347	ILMN_215347	MLF1	scl23113.7.1_10	NM_010801.1			6754701	NM_010801.1	Mlf1		ILMN_2658425	002680414	S	497	TTCTGACAGTGGACTAGAAAGAATGGCTGTTGGTCATCACATCCATGACC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby a precursor cell type acquires the specialized features of a myeloid progenitor cell. Myeloid progenitor cells include progenitor cells for any of the myeloid lineages [goid 2318] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209907	ILMN_209907	GOSR2	NM_019650.2	NM_019650.2		56494	24528552	NM_019650.2	Gosr2	NP_062624.2	ILMN_2815107	004670156	S	2863	GATGTATTCTCCATGTATGGCCACTTGAAGGAATGCTAAATCCAAGGACC	11	-	103538312-103538361	11qE1	Mus musculus golgi SNAP receptor complex member 2 (Gosr2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SNARE; Gs27; C76855; 2310032N09Rik; membrin	SNARE; Gs27; C76855; 2310032N09Rik; membrin
Mus musculus	RefSeq	ILMN_209907	ILMN_209907	GOSR2	NM_019650.2	NM_019650.2		56494	24528552	NM_019650.2	Gosr2	NP_062624.2	ILMN_2600339	004200347	S	658	ATGTTCCTCGTGGTACAGTACCTGACATGAGCCAGCTGTACCCAGCACTG	11	-	103540517-103540549:103540550-103540566	11qE1	Mus musculus golgi SNAP receptor complex member 2 (Gosr2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SNARE; Gs27; C76855; 2310032N09Rik; membrin	SNARE; Gs27; C76855; 2310032N09Rik; membrin
Mus musculus	RefSeq	ILMN_209907	ILMN_209907	GOSR2	NM_019650.2	NM_019650.2		56494	24528552	NM_019650.2	Gosr2	NP_062624.2	ILMN_1224380	004280020	S	2088	GTTGCTCTTTCCCTGTAGGTTAAATGTGCCATAGCTGGTCAGAAAGGGGG	11	-	103539087-103539136	11qE1	Mus musculus golgi SNAP receptor complex member 2 (Gosr2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SNARE; Gs27; C76855; 2310032N09Rik; membrin	SNARE; Gs27; C76855; 2310032N09Rik; membrin
Mus musculus	RefSeq	ILMN_209907	ILMN_209907	GOSR2	NM_019650.2	NM_019650.2		56494	24528552	NM_019650.2	Gosr2	NP_062624.2	ILMN_2651190	002100129	S	2442	GTTTCCACCTTTGTAGCAGTCCTTGGCTTTAGTGAACTTGATGTTCCACC	11	-	103538733-103538782	11qE1	Mus musculus golgi SNAP receptor complex member 2 (Gosr2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SNARE; Gs27; C76855; 2310032N09Rik; membrin	SNARE; Gs27; C76855; 2310032N09Rik; membrin
Mus musculus	RefSeq	ILMN_211863	ILMN_211863	MARVELD2	NM_178410.2	NM_178410.2		218518	31341532	NM_178410.2	Marveld2	NP_848497.1	ILMN_2620209	003520528	S	1691	TTAAACGTTAAACACACTTAACTTTGTGAGACTTTATTTTACTACAGTTG	13	-	101366006-101366055	13qD1	Mus musculus MARVEL (membrane-associating) domain containing 2 (Marveld2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tric-c; MGC55067; MARVD2; Tric-a; Tric-b; Tric; BC003296; Mrvldc2	Tric-c; MGC55067; MARVD2; Tric-a; Tric-b; Tric; BC003296; Mrvldc2
Mus musculus	RefSeq	ILMN_217949	ILMN_217949	RMND5B	NM_025346.1	NM_025346.1		66089	28076878	NM_025346.1	Rmnd5b	NP_079622.1	ILMN_2689667	002490386	S	1259	AAGCTGTGATCGAACAGAGGCAGTGCACTGGGGTGTGGAGTCACAAGGAT	11	-	51437985-51438034	11qB1.3	Mus musculus required for meiotic nuclear division 5 homolog B (S. cerevisiae) (Rmnd5b), mRNA.				0610039K22Rik; RP23-79E13.4	0610039K22Rik; RP23-79E13.4
Mus musculus	RefSeq	ILMN_217949	ILMN_217949	RMND5B	NM_025346.1	NM_025346.1		66089	28076878	NM_025346.1	Rmnd5b	NP_079622.1	ILMN_2918663	003800367	S	1539	CCAAGGAACATTCTAGAAGGTGTAATCCACCCATGGGCCTTTGTGGAGGG	11	-	51437532-51437581	11qB1.3	Mus musculus required for meiotic nuclear division 5 homolog B (S. cerevisiae) (Rmnd5b), mRNA.				0610039K22Rik; RP23-79E13.4	0610039K22Rik; RP23-79E13.4
Mus musculus	RefSeq	ILMN_221881	ILMN_221881	SSTR3	NM_009218.3	NM_009218.3		20607	133778972	NM_009218.3	Sstr3	NP_033244.2	ILMN_2741571	000460333	S	1234	GATGCCTTTCTATCTGCTCAACATCGTCAATGTGGTGTGCCCGCTGCCGG	15	-	78370089-78370138	15qE1	Mus musculus somatostatin receptor 3 (Sstr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An immotile primary cilium that may be missing the central pair of microtubules, or the central pair of microtubules and outer dynein arms. Some primary cilia also have altered arrangements of outer microtubules (fewer than nine and/or not always present as doublets). Nonmotile primary cilia typically function as sensory organelles that concentrate and organize sensory signaling molecules [goid 31513] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [evidence IEA]	Smstr-3; Smstr3; sst3	Smstr-3; Smstr3; sst3
Mus musculus	Riken	ILMN_207346	ILMN_207346	9530061L16RIK	ri|9530061L16|PX00653J12|AK079256|2491					AK079256	9530061L16Rik		ILMN_1221334	001470056	S	2397	ATTCCAGTTTCAGGGGATCTGATGCGTTCTACAGGCGTCCACAAGTCCTG										
Mus musculus	RefSeq	ILMN_187929	ILMN_249089	CPEB4	NM_026252.3	NM_026252.3		67579	118129821	NM_026252.3	Cpeb4	NP_080528.2	ILMN_2684721	006060554	S	1135	CAGCCTTTGCTCCAAAATCCTGGATGGAAGATAGCTTGAACAGGGCTGAC	11	+	31773345-31773394	11qA4	Mus musculus cytoplasmic polyadenylation element binding protein 4 (Cpeb4), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4930447D24Rik; AI851572; mKIAA1673	4930447D24Rik; AI851572; mKIAA1673
Mus musculus	RefSeq	ILMN_249089	ILMN_249089	CPEB4	NM_026252.3	NM_026252.3		67579	118129821	NM_026252.3	Cpeb4	NP_080528.2	ILMN_2807803	002450274	S	2185	CTCGTGCTGGCAGAGAATTCCACAAGCCCCTGGTGAAGGAAGGTGGTGAC	11	+	31831450-31831499	11qA4	Mus musculus cytoplasmic polyadenylation element binding protein 4 (Cpeb4), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4930447D24Rik; AI851572; mKIAA1673	4930447D24Rik; AI851572; mKIAA1673
Mus musculus	RefSeq	ILMN_212231	ILMN_212231	SCN9A	NM_018852.2	NM_018852.2		20274	125630308	NM_018852.2	Scn9a	NP_061340.2	ILMN_2624221	001050064	S	6503	GCCTGCGAAGGTGACTCACTCGTGTTAATAAGACTCTTTTACGGAGGTCT	2	-	66321397-66321446	2qC1.3	Mus musculus sodium channel, voltage-gated, type IX, alpha (Scn9a), mRNA. XM_899677 XM_899685 XM_908593 XM_920936 XM_920944 XM_920951 XM_920969 XM_920980	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence IEA]	Scn1a; mKIAA4197; Nav1.7; PN1; KIAA4197	Scn1a; mKIAA4197; Nav1.7; PN1; KIAA4197
Mus musculus	RefSeq	ILMN_197250	ILMN_212231	SCN9A	NM_018852.2	NM_018852.2		20274	125630308	NM_018852.2	Scn9a	NP_061340.2	ILMN_1217213	001410441	S	541	TGAGAAGATGGCGATGTTGCCTCCGCCAGGACCTCAGAGCTTCGTTCACT	2	-	66406278-66406321:66406322-66406327	2qC1.3	Mus musculus sodium channel, voltage-gated, type IX, alpha (Scn9a), mRNA. XM_899677 XM_899685 XM_908593 XM_920936 XM_920944 XM_920951 XM_920969 XM_920980	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence IEA]	Scn1a; mKIAA4197; Nav1.7; PN1; KIAA4197	Scn1a; mKIAA4197; Nav1.7; PN1; KIAA4197
Mus musculus	RefSeq	ILMN_210601	ILMN_210601	MON1A	NM_028369.1	NM_028369.1		72825	21312178	NM_028369.1	Mon1a	NP_082645.1	ILMN_2734368	005570209	S	488	GGACATGCGCCAGATTAGCCAGGACTTCAGCGAGCTAAGCACCCAGCTGA	9	+	107758254-107758303	9qF1	Mus musculus MON1 homolog A (yeast) (Mon1a), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; The regulated release of proteins from a cell or group of cells [goid 9306] [evidence IMP]		2810468K17Rik	2810468K17Rik
Mus musculus	RefSeq	ILMN_197187	ILMN_197187	LOC380843	XM_354752.1	XM_354752.1			38074505	XM_354752.1	LOC380843		ILMN_2527225	001850682	S	385	ACGTCTACCCGCAGGCTTTTGTGCAGCCTGGAGTGGTCATTCCCCATGTG										
Mus musculus	RefSeq	ILMN_217487	ILMN_217487	OAZ2	NM_010952.2	NM_010952.2		18247	37596299	NM_010952.2	Oaz2	NP_035082.1	ILMN_2683794	005560180	S	1429	CCAAACTACATCTCAAGTTACCACCAGAGCTCTTGCCTCTGTGGCCTAGG	9	+	65537734-65537783	9qC	Mus musculus ornithine decarboxylase antizyme 2 (Oaz2), mRNA.		The chemical reactions and pathways involving polyamines, any organic compound containing two or more amino groups [goid 6595] [evidence TAS]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The stopping, prevention or reduction of the activity of the enzyme ornithine decarboxylase [goid 8073] [evidence IGI]	Sez15; AZ-2	Sez15; AZ-2
Mus musculus	Riken	ILMN_204233	ILMN_204233	A830007N20RIK	ri|A830007N20|PX00153L01|AK043557|3986					AK043557	A830007N20Rik		ILMN_1239734	006960717	S	3640	TGCCTTTGTCTGATGCCCGTGGTCTTGCGTCTGACCAGCATGGGACTCTC										
Mus musculus	RefSeq	ILMN_209332	ILMN_209332	RFK	NM_019437.2	NM_019437.2		54391	142378133	NM_019437.2	Rfk	NP_062310.1	ILMN_2594796	004850168	S	2247	TGGCTAATGTTATCTCATTTTGTTAGTCGTTATTTTGGAATTACATGATG	19	+	17475644-17475693	19qB	Mus musculus riboflavin kinase (Rfk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) [goid 9231] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + riboflavin = ADP + FMN [goid 8531] [evidence ISA]	KOI-4; 0610038L10Rik; AF031381	KOI-4; 0610038L10Rik; AF031381
Mus musculus	MEEBO	ILMN_187006	ILMN_187006	PPM1H	scl38353.28.1_8				31342387	NM_176919	Ppm1h		ILMN_1214471	007610382	S	14	TGATGCGTGCCCGAGGCGTCCTGAAGGACCGAGGGTGGCGGATATCGAAT						A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220624	ILMN_220624	ANXA8	NM_013473.2	NM_013473.2		11752	22165407	NM_013473.2	Anxa8	NP_038501.2	ILMN_2863332	004180239	S	1465	GGAACATGGATTTCTAGCAGTTGTCTTAGCTGCTAAGCATCATTATCAGG	14	+	32929252-32929301	14qB	Mus musculus annexin A8 (Anxa8), mRNA.		The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC40628; Anx8; AI466995	MGC40628; Anx8; AI466995
Mus musculus	RefSeq	ILMN_187547	ILMN_233589	GOLT1B	NM_025872.4	NM_025872.4		66964	118130254	NM_025872.4	Golt1b	NP_080148.1	ILMN_2633275	000380433	S	137	TGGGCTTAACAGGATTTGGAGTGTTTTTCCTGTTCTTTGGAATGATTCTC	6	+	142340859-142340908	6qG2	Mus musculus golgi transport 1 homolog B (S. cerevisiae) (Golt1b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		AA407874; 2310061A22Rik; CGI-141; AU024291	AA407874; 2310061A22Rik; CGI-141; AU024291
Mus musculus	RefSeq	ILMN_187547	ILMN_233589	GOLT1B	NM_025872.4	NM_025872.4		66964	118130254	NM_025872.4	Golt1b	NP_080148.1	ILMN_2774802	000620520	S	522	ACAAGAACTGAAGAACTTAAATACTGTATTCTTTATAAAGCCCTTTGGAA	6	+	142350104-142350153	6qG2	Mus musculus golgi transport 1 homolog B (S. cerevisiae) (Golt1b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		AA407874; 2310061A22Rik; CGI-141; AU024291	AA407874; 2310061A22Rik; CGI-141; AU024291
Mus musculus	RefSeq	ILMN_186723	ILMN_235516	TRP73	NM_011642.2	NM_011642.2		22062	142375138	NM_011642.2	Trp73	NP_035772.1	ILMN_1236930	003610735	S	2205	AGGTCCCGACGAGTGGGCGGACTTTGGCTTTGACCTGCCTGACTGCAAGT	4	-	153433149-153433198	4qE2	Mus musculus transformation related protein 73 (Trp73), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The regulated release of cerebrospinal fluid (CSF) from the choroid plexus of the lateral, third and fourth ventricles. The cerebrospinal fluid is a clear liquid that located within the ventricles, spinal canal, and subarachnoid spaces [goid 33326] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The process by which the anatomical structures of the digestive tract are generated and organized. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48546] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of JUN kinase activity [goid 43508] [evidence IDA]; Any process that increases cell size [goid 45793] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IGI]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; Any process that increases cell size [goid 45793] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence TAS]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	Interacting selectively with one of the p53 family of proteins [goid 2039] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	p73	p73
Mus musculus	RefSeq	ILMN_205880	ILMN_234727	4833446K15RIK	XM_994478.1	XM_994478.1		78923	94405398	XM_994478.1	4833446K15Rik	XP_999572.1	ILMN_1234980	004640544	S	3274	GCAGTGCTAAGGCCCCCAGACAGACAGTGTTGAGTTTGTGTCCTGGTGTC				18qD3	PREDICTED: Mus musculus RIKEN cDNA 4833446K15 gene, transcript variant 2 (4833446K15Rik), mRNA.					
Mus musculus	Riken	ILMN_203438	ILMN_203438	CSND	ri|D730003B11|PX00089K18|AK052789|1670					AK052789	Csnd		ILMN_1221024	001770220	S	1164	CTGTTCTCTGACCTCCACACATCAGATAGGCTCTAAGGCATACATGTACC										
Mus musculus	RefSeq	ILMN_223411	ILMN_223411	OLFR945	NM_146506.1	NM_146506.1		258499	33239213	NM_146506.1	Olfr945	NP_666717.1	ILMN_2763729	007550681	S	581	ATACCTATATCGATGAAATGTTGATTTTATTTTTTGGTACACTGAATATC	9	-	39065634-39065683	9qA5.1	Mus musculus olfactory receptor 945 (Olfr945), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC157590; MOR171-20	MGC157590; MOR171-20
Mus musculus	RefSeq	ILMN_194217	ILMN_194217	HSP90B1	NM_011631.1	NM_011631.1		22027	6755862	NM_011631.1	Hsp90b1	NP_035761.1	ILMN_2504433	006960553	S	2502	ATACTCTCGCTATGAATCCCGTGTGGAGAGGGAATGTGAAGTTTTGAAGT	10	-	86153793-86153842	10qC1	Mus musculus heat shock protein 90, beta (Grp94), member 1 (Hsp90b1), mRNA.	Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 44459] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISO]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	TA-3; ERp99; Targ2; GRP94; Tra1; Tra-1; gp96	TA-3; ERp99; Targ2; GRP94; Tra1; Tra-1; gp96
Mus musculus	RefSeq	ILMN_216816	ILMN_216816	GBP3	NM_018734.2	NM_018734.2		55932	31980915	NM_018734.2	Gbp3	NP_061204.2	ILMN_2918002	000060553	S	2304	TTGTCAGATACTGCTTCCTCGGAGTCTAATTCTGTGTCAGTTCATTACCT	3	+	142510218-142510267	3qH1	Mus musculus guanylate nucleotide binding protein 3 (Gbp3), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Gbp4; AW228655	Gbp4; AW228655
Mus musculus	RefSeq	ILMN_259664	ILMN_259664	NTRK2	NM_001025074.1	NM_001025074.1		18212	68215969	NM_001025074.1	Ntrk2	NP_001020245.1	ILMN_3138904	005420593	A	1848	GGTGGGATTCTGCCTGCTGGTGATGTTGCTCCTGCTCAAGTTGGCGAGAC	13	+	58979553-58979602	13qB1-qB2	Mus musculus neurotrophic tyrosine kinase, receptor, type 2 (Ntrk2), transcript variant 1, mRNA.	Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IMP]; Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light [goid 46548] [evidence IMP]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	trkB; C030027L06Rik; AI848316; Tkrb	trkB; C030027L06Rik; AI848316; Tkrb
Mus musculus	RefSeq	ILMN_259664	ILMN_259664	NTRK2	NM_001025074.1	NM_001025074.1		18212	68215969	NM_001025074.1	Ntrk2	NP_001020245.1	ILMN_3061460	006130050	I	4057	GGAAAACCCGAGTCCTTGACAAAGACAGGAGACGCTCTCAATTTGGAGGC	13	+	59230780-59230829	13qB1-qB2	Mus musculus neurotrophic tyrosine kinase, receptor, type 2 (Ntrk2), transcript variant 1, mRNA.	Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IMP]; Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light [goid 46548] [evidence IMP]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	trkB; C030027L06Rik; AI848316; Tkrb	trkB; C030027L06Rik; AI848316; Tkrb
Mus musculus	RefSeq	ILMN_210061	ILMN_210061	PLCG2	NM_172285.1	NM_172285.1		234779	26986602	NM_172285.1	Plcg2	NP_758489.1	ILMN_2601833	001940255	S	4200	ACTTTCTTAACTTATACTACCCCTGATAGAGGATCCCCCCAACTGTGTGC	8	+	120158944-120158993	8qE1	Mus musculus phospholipase C, gamma 2 (Plcg2), mRNA.		The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A process that initiates the activity of an inactive store-operated calcium channel [goid 32237] [evidence IMP]; The process whereby a B cell in the spleen acquires the specialized features of a follicular B cell. Follicular B cells are major population of mature recirculating B cells in the spleen and are located in the B-cell follicle region [goid 2316] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43069] [evidence IMP]; The chemical reactions and pathways resulting in the formation of inositol trisphosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached [goid 32959] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Plcg-2; MGC38590	Plcg-2; MGC38590
Mus musculus	RefSeq	ILMN_201443	ILMN_201443	LOC382163	XM_356263.1	XM_356263.1			38093896	XM_356263.1	LOC382163		ILMN_1237356	000130201	S	1069	GTCAATGGGGCTCCTGCTGATGCTGAGCCAAATTCTTCCACCTGTGCTGC										
Mus musculus	RefSeq	ILMN_244329	ILMN_244329	MTUS1	NM_001005865.2	NM_001005865.2		102103	111074537	NM_001005865.2	Mtus1	NP_001005865.2	ILMN_3162801	003060021	I	93	ACCCCGAGTTGCCAAGAGACACAGTATGTGATGGTCCCTGGAAAAGCTGC	8	-	42127123-42127172	8qA4	Mus musculus mitochondrial tumor suppressor 1 (Mtus1), nuclear gene encoding mitochondrial protein, transcript variant 4, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		MGC115798; B430305I03Rik; C85752; ATBP135; MTSG1; AI481402; B430010I23Rik; mKIAA1288; Cctsg1-440; MD44; Atip1	MGC115798; B430305I03Rik; C85752; ATBP135; MTSG1; AI481402; B430010I23Rik; mKIAA1288; Cctsg1-440; MD44; Atip1
Mus musculus	RefSeq	ILMN_244329	ILMN_244329	MTUS1	NM_001005865.2	NM_001005865.2		102103	111074537	NM_001005865.2	Mtus1	NP_001005865.2	ILMN_3163347	006040753	A	1263	GGACAAACACATGGCAATTTCAAGGCAACTTTCCACCGAGCAGGCCGCGC	8	-	42083717-42083766	8qA4	Mus musculus mitochondrial tumor suppressor 1 (Mtus1), nuclear gene encoding mitochondrial protein, transcript variant 4, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		MGC115798; B430305I03Rik; C85752; ATBP135; MTSG1; AI481402; B430010I23Rik; mKIAA1288; Cctsg1-440; MD44; Atip1	MGC115798; B430305I03Rik; C85752; ATBP135; MTSG1; AI481402; B430010I23Rik; mKIAA1288; Cctsg1-440; MD44; Atip1
Mus musculus	RefSeq	ILMN_240818	ILMN_240818	SERINC1	NM_019760.1	NM_019760.1		56442	9790268	NM_019760.1	Serinc1	NP_062734.1	ILMN_2935898	003450470	S	2438	CGCTGCTGTCCAGCATGCTTTTCTTCTTTTTATCCAAACATGAGGCCAGG	10	-	57204500-57204549	10qB4	Mus musculus serine incorporator 1 (Serinc1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]		Tde2; Tde1l; Tms2; AI315070; mKIAA1253; 1500011D18Rik; TMS-2	Tde2; Tde1l; Tms2; AI315070; mKIAA1253; 1500011D18Rik; TMS-2
Mus musculus	MEEBO	ILMN_219996	ILMN_219996	6030466F02RIK	scl33195.4.1_136				51764376	XM_489254	6030466F02Rik		ILMN_2716223	005490687	S	1174	CCAGGCAGCCCTTAAGAGCCCACGATAGCTTCTGTACACCCTGTTCTCCT										
Mus musculus	RefSeq	ILMN_187127	ILMN_187127	VSIG4	NM_177789.4	NM_177789.4		278180	146198705	NM_177789.4	Vsig4	NP_808457.1	ILMN_1241350	006040356	S	1164	GCTTCTGGGCTTCACCCAGAACAATTTTCTTCCTAGGGCCTTCACAACTC				XqC3	Mus musculus V-set and immunoglobulin domain containing 4 (Vsig4), mRNA.		Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-2 production [goid 32703] [evidence IDA]		MGC36211; BC025105; A530061A11; Z39IG	MGC36211; BC025105; A530061A11; Z39IG
Mus musculus	RefSeq	ILMN_220753	ILMN_220753	CETN3	NM_007684.3	NM_007684.3		12626	133891820	NM_007684.3	Cetn3	NP_031710.1	ILMN_2726325	005690681	S	564	CCAAAATGTTACTTTTACCATCTATCTTCTCTTTGTGTGCCTGGAGTCCA	13	+	81935707-81935756	13qC3	Mus musculus centrin 3 (Cetn3), mRNA.	A 9+0 cilium that forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments [goid 32391] [evidence IDA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a complex of G-protein beta/gamma subunits [goid 31683] [evidence IDA]	MmCEN3	MmCEN3
Mus musculus	Riken	ILMN_205674	ILMN_205674	C230080I20RIK	ri|C230080I20|PX00176P04|AK048908|3277					AK048908	C230080I20Rik		ILMN_2574388	003060239	S	2838	GGACCTGCCAATCATGGGTCTGTGTTTCTTAAAAGACTCAAGGACCTACT										
Mus musculus	RefSeq	ILMN_212334	ILMN_212334	PGA5	NM_021453.3	NM_021453.3		58803	142378195	NM_021453.3	Pga5	NP_067428.2	ILMN_2625262	007160301	S	1214	ACCGTGTTTGATCGGGCAAATAACAGGATTGGTCTGGCTCCTGCTGCATG	19	-	10743599-10743648	19qA	Mus musculus pepsinogen 5, group I (Pga5), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IDA]	Pepf; 1110035E17Rik	Pepf; 1110035E17Rik
Mus musculus	RefSeq	ILMN_210105	ILMN_210105	SLC35C2	NM_144893.1	NM_144893.1		228875	21450264	NM_144893.1	Slc35c2	NP_659142.1	ILMN_2895000	000010204	S	1643	GATTTCCTCTCCACAGCCCAGTGTTGCCTAAGGCATGAGAGCAGGGAGAG	2	-	165102204-165102253	2qH3	Mus musculus solute carrier family 35, member C2 (Slc35c2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		C85957; D2Wsu58e; CGI-15; MGC18664; Ovcov1	C85957; D2Wsu58e; CGI-15; MGC18664; Ovcov1
Mus musculus	RefSeq	ILMN_210105	ILMN_210105	SLC35C2	NM_144893.1	NM_144893.1		228875	21450264	NM_144893.1	Slc35c2	NP_659142.1	ILMN_2894999	007330243	S	1537	CAGATTCGGACTGTGGGGTATCAGGAAAGGAGTCATGGAGAGACTAGGCC	2	-	165102310-165102359	2qH3	Mus musculus solute carrier family 35, member C2 (Slc35c2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		C85957; D2Wsu58e; CGI-15; MGC18664; Ovcov1	C85957; D2Wsu58e; CGI-15; MGC18664; Ovcov1
Mus musculus	RefSeq	ILMN_210105	ILMN_210105	SLC35C2	NM_144893.1	NM_144893.1		228875	21450264	NM_144893.1	Slc35c2	NP_659142.1	ILMN_2729374	003290445	S	1571	ATGGAGAGACTAGGCCTCATCACCTGGACTGCAGCTTCCTCAGAGAGTAG	2	-	165102276-165102325	2qH3	Mus musculus solute carrier family 35, member C2 (Slc35c2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		C85957; D2Wsu58e; CGI-15; MGC18664; Ovcov1	C85957; D2Wsu58e; CGI-15; MGC18664; Ovcov1
Mus musculus	Riken	ILMN_203083	ILMN_203083	SMOC2	ri|A430062I15|PX00136N07|AK040109|590					AK040109	Smoc2		ILMN_2554610	005050484	S	463	TGGGGACTGAACCCAGGACCCCTTTCGTGCTAGGCAAGGATCTCTACCAA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_236103	ILMN_236103	CENPL	NM_027429.1	NM_027429.1		70454	74959803	NM_027429.1	Cenpl	NP_081705.1	ILMN_2883414	002000139	S	4063	GGGACAGTGGAAGAAATGGAGCACTTGTCTCAGGGTGCCTCTGGAGTTGC	1	+	162922805-162922854	1qH2.1	Mus musculus centromere protein L (Cenpl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]			2610300B10Rik; AW550697; AW121806	2610300B10Rik; AW550697; AW121806
Mus musculus	RefSeq	ILMN_215918	ILMN_215918	GYKL1	NM_010293.2	NM_010293.2		14625	49355800	NM_010293.2	Gykl1	NP_034423.2	ILMN_2665209	006110224	S	1792	TGTTTATGTGCCCCTTGTTGCATGTATCTCCAAGAAGACCTGAGATGTGA	18	+	52855135-52855184	18qD1	Mus musculus glycerol kinase-like 1 (Gykl1), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AI449806; MGC141317; Gk-rs1	AI449806; MGC141317; Gk-rs1
Mus musculus	RefSeq	ILMN_220994	ILMN_220994	ZDHHC20	NM_029492.4	NM_029492.4		75965	85719323	NM_029492.4	Zdhhc20	NP_083768.4	ILMN_1216728	002710403	S	1587	GTCTGTGGTGAAGTATACCTAGGGAAAACGGGGGCTAAAAATGATGCCCA	14	-	58455075-58455124	14qC3	Mus musculus zinc finger, DHHC domain containing 20 (Zdhhc20), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI448102; B230110O18Rik; 5033406L14Rik; HK11	AI448102; B230110O18Rik; 5033406L14Rik; HK11
Mus musculus	RefSeq	ILMN_220994	ILMN_220994	ZDHHC20	NM_029492.4	NM_029492.4		75965	85719323	NM_029492.4	Zdhhc20	NP_083768.4	ILMN_2730351	003360519	S	1167	TTACAGTGGAAATAGAAAATTGAGTACTACTTGTTCATAACTAACCATTT	14	-	58456439-58456466:58456467-58456488	14qC3	Mus musculus zinc finger, DHHC domain containing 20 (Zdhhc20), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI448102; B230110O18Rik; 5033406L14Rik; HK11	AI448102; B230110O18Rik; 5033406L14Rik; HK11
Mus musculus	RefSeq	ILMN_190068	ILMN_220994	ZDHHC20	NM_029492.4	NM_029492.4		75965	85719323	NM_029492.4	Zdhhc20	NP_083768.4	ILMN_2466891	006180156	S	5091	GATAAAGATATTGTCTTGTTTTTTAATGGTTTTGTTGCCATTATATTTGT	14	-	58451571-58451620	14qC3	Mus musculus zinc finger, DHHC domain containing 20 (Zdhhc20), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI448102; B230110O18Rik; 5033406L14Rik; HK11	AI448102; B230110O18Rik; 5033406L14Rik; HK11
Mus musculus	RefSeq	ILMN_199300	ILMN_199300	LOC236277	XM_135589.1	XM_135589.1			20918627	XM_135589.1	LOC236277		ILMN_1238839	000380039	S	691	CCCAGAACTCTGTGTGGAGCCCAGGAGCCCTGATGCCCTGCTAAGACTTA										
Mus musculus	MEEBO	ILMN_185480	ILMN_185480	IGHV10S3_AF064446_IG_HEAVY_VARIABLE_10S3_9	IGHV10S3_AF064446_Ig_heavy_variable_10S3_9						IGHV10S3_AF064446_Ig_heavy_variable_10S3_9		ILMN_2427368	000670674	S	8	AGTGGGTTTTCTTTGTTGTTTTTTATCAAGGTGTGCATTGTGAGGTGCAG										
Mus musculus	RefSeq	ILMN_197140	ILMN_197140	LOC381340	XM_355304.1	XM_355304.1			38074272	XM_355304.1	LOC381340		ILMN_1238139	003780594	S	182	CAACCTTTCCTCTCAATTTCTATAGGCCCTTGTTCTATGCTATTTTCTGG										
Mus musculus	RefSeq	ILMN_210291	ILMN_210291	KLK7	NM_011872.2	NM_011872.2		23993	31981356	NM_011872.2	Klk7	NP_036002.1	ILMN_1251558	006590736	S	1293	GGGAGTTGGACTGCTCTCATTATGAAGTTGTGAAGTTGCTTAAGGTGTAC	7	+	51071277-51071326	7qB4	Mus musculus kallikrein related-peptidase 7 (chymotryptic, stratum corneum) (Klk7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	SCCE; Prss6	SCCE; Prss6
Mus musculus	RefSeq	ILMN_214344	ILMN_214344	IFT74	NM_026319.2	NM_026319.2		67694	151101193	NM_026319.2	Ift74	NP_080595.2	ILMN_2647044	004730189	S	1961	ACTGAGTCTACAAGCATCCTCAAGGATGCTAAAAGTAAACTAGCTTCCCC				4qC5	Mus musculus intraflagellar transport 74 homolog (Chlamydomonas) (Ift74), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ccdc2; Cmg1; 1700029H06Rik	Ccdc2; Cmg1; 1700029H06Rik
Mus musculus	RefSeq	ILMN_205218	ILMN_214344	IFT74	NM_026319.2	NM_026319.2		67694	151101193	NM_026319.2	Ift74	NP_080595.2	ILMN_1226865	003400187	S	190	CGGGGTGGAATAGGACTAACAGGAAGGCCTCCTTCTGGAATAAGACCTCC				4qC5	Mus musculus intraflagellar transport 74 homolog (Chlamydomonas) (Ift74), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ccdc2; Cmg1; 1700029H06Rik	Ccdc2; Cmg1; 1700029H06Rik
Mus musculus	RefSeq	ILMN_201689	ILMN_214344	IFT74	NM_026319.2	NM_026319.2		67694	151101193	NM_026319.2	Ift74	NP_080595.2	ILMN_1244628	001230603	S	366	CCAACAAGGTTTGAGTGGAATGAAGACTGGCATGAAAGGTCCCCAGAGGC				4qC5	Mus musculus intraflagellar transport 74 homolog (Chlamydomonas) (Ift74), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ccdc2; Cmg1; 1700029H06Rik	Ccdc2; Cmg1; 1700029H06Rik
Mus musculus	RefSeq	ILMN_245109	ILMN_245109	MED25	NM_029365.1	NM_029365.1		75613	20149311	NM_029365.1	Med25	NP_083641.1	ILMN_2804622	001170398	S	2227	CCTGCAGCCCAGCGTCATGGAGGACGACATCCTCATGGACCTCATCTGAA				7qB4	Mus musculus mediator of RNA polymerase II transcription, subunit 25 homolog (yeast) (Med25), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		2610529E18Rik; X83308; ESTM2; 2610034E13Rik	2610529E18Rik; X83308; ESTM2; 2610034E13Rik
Mus musculus	RefSeq	ILMN_219033	ILMN_312145	LOC100047937	XM_001479188.1	XM_001479188.1		100047937	149255672	XM_001479188.1	LOC100047937	XP_001479238.1	ILMN_2706906	004890608	S	591	CCTGGAGCTGGGTGGAAAGTCACCCCTTATCATCTTTGCTGACTGTGACC					PREDICTED: Mus musculus similar to Aldehyde dehydrogenase 1 family, member L1 (LOC100047937), mRNA.					
Mus musculus	RefSeq	ILMN_219033	ILMN_312145	LOC100047937	XM_001479188.1	XM_001479188.1		100047937	149255672	XM_001479188.1	LOC100047937	XP_001479238.1	ILMN_2703392	005900047	S	783	AATCGGCAACCCCCTGGACAGAGATACCAACCATGGCCCGCAGAACCATG					PREDICTED: Mus musculus similar to Aldehyde dehydrogenase 1 family, member L1 (LOC100047937), mRNA.					
Mus musculus	RefSeq	ILMN_201813	ILMN_312145	LOC100047937	XM_001479188.1	XM_001479188.1		100047937	149255672	XM_001479188.1	LOC100047937	XP_001479238.1	ILMN_2544789	003460367	S	1778	GGGTTCTCACTCAGTGGACTTGGACAGCCACAATGGTAGCCTGGGGTCTA					PREDICTED: Mus musculus similar to Aldehyde dehydrogenase 1 family, member L1 (LOC100047937), mRNA.					
Mus musculus	Riken	ILMN_206981	ILMN_206981	4933407M15RIK	ri|4933407M15|PX00642C19|AK077119|1813					AK077119	4933407M15Rik		ILMN_2584142	000130341	S	1716	GGATCTAGTGCCCTCTTCTGGTCTCGGTGGGCACTGTACTCACGTGCACA										
Mus musculus	RefSeq	ILMN_196930	ILMN_325988	LOC100039742	XM_001473420.1	XM_001473420.1		100039742	149234147	XM_001473420.1	LOC100039742	XP_001473470.1	ILMN_1213824	006220274	S	451	ACACATCTGAAGGCCTACCCGGAAATCAGGAATCAGGTTCACCAGCTGTA	1	-	85109020-85109069	1qC5	PREDICTED: Mus musculus similar to SP140 nuclear body protein family member (LOC100039742), mRNA.					
Mus musculus	RefSeq	ILMN_210236	ILMN_210236	SMARCC1	NM_009211.2	NM_009211.2		20588	112421096	NM_009211.2	Smarcc1	NP_033237.2	ILMN_2641613	003170358	S	4724	GCCTGTATCTACCCCTGCTGATGAACAACTAGATGGGTTTTGGTTTTGCC	9	+	110141733-110141782	9qF2	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 (Smarcc1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process by which DNA and associated proteins are formed into a compact, orderly structure [goid 6323] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BAF155; AI115498; Rsc8; SRG3	BAF155; AI115498; Rsc8; SRG3
Mus musculus	RefSeq	ILMN_210236	ILMN_210236	SMARCC1	NM_009211.2	NM_009211.2		20588	112421096	NM_009211.2	Smarcc1	NP_033237.2	ILMN_1217302	004150204	S	2916	CCACATGGAACAGTTGAAATATGCTGAACTACGTGCCCGGCAGCAAATGG	9	+	110124440-110124489	9qF2	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 (Smarcc1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process by which DNA and associated proteins are formed into a compact, orderly structure [goid 6323] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BAF155; AI115498; Rsc8; SRG3	BAF155; AI115498; Rsc8; SRG3
Mus musculus	RefSeq	ILMN_222408	ILMN_222408	S100A5	NM_011312.2	NM_011312.2		20199	113930759	NM_011312.2	S100a5	NP_035442.1	ILMN_2749169	004250398	S	215	GCGACCAGGAGATTGACTTCAAGGAGTACTCTGTGTTCCTGACCACGCTG	3	+	90415485-90415534	3qF1	Mus musculus S100 calcium binding protein A5 (S100a5), mRNA.			Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	S100D9	S100D9
Mus musculus	RefSeq	ILMN_199236	ILMN_310328	LOC623466	XR_033501.1	XR_033501.1		623466	149254660	XR_033501.1	LOC623466		ILMN_1253395	000830349	S	580	TGTGGCTCTGTGCTGGTGCGTCTCATCCCTGCCCCCAGAGGCACTGGCAT	5	-	141743806-141743855	5qG2	PREDICTED: Mus musculus similar to MGC27348 protein (LOC623466), misc RNA.					
Mus musculus	Riken	ILMN_205689	ILMN_205689	FAAH	ri|6330576B15|PX00315A12|AK032079|1927					AK032079	Faah		ILMN_1238972	002030184	S	1585	CCACACCACAGAGGCTTCGGAAAGATGACCTAAGACACAAGGGGAGGCTG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193069	ILMN_247494	AQP4	NM_009700.1	NM_009700.1		11829	33563243	NM_009700.1	Aqp4	NP_033830.1	ILMN_2757232	007160193	S	1338	GTGCAGAGCATATGGACACCTCTGTGAGGAAGCTGGCATTGTCCATCGTC	18	-	15551566-15551615	18qA1	Mus musculus aquaporin 4 (Aqp4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]; Any process involved in the maintenance of an internal equilibrium of water within an organism or cell [goid 30104] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence IDA]	MIWC; aquaporin-4; mMIWC	MIWC; aquaporin-4; mMIWC
Mus musculus	RefSeq	ILMN_213468	ILMN_316183	A430093F15RIK	XR_035341.1	XR_035341.1		403202	149270636	XR_035341.1	A430093F15Rik		ILMN_1254452	001820040	S	732	CCGGCATACGTTCAGAGCATGAAACTTGACCCTGATTGCATCCTGTTACT					PREDICTED: Mus musculus RIKEN cDNA A430093F15 gene (A430093F15Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_214378	ILMN_328870	RCOR3	NM_144814.2	NM_144814.2		214742	57634522	NM_144814.2	Rcor3	NP_659063.2	ILMN_2647400	000610674	S	760	CCCAACGCAGCCAACACCATCCTGAGGCAACTGGACATGGAGCTGATCTC	1	-	193943808-193943857	1qH6	Mus musculus REST corepressor 3 (Rcor3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	E130101E15Rik; C730034D20Rik; MGC28186; 4921514E24Rik	E130101E15Rik; C730034D20Rik; MGC28186; 4921514E24Rik
Mus musculus	Riken	ILMN_203203	ILMN_203203	ITGA6	ri|B230112G01|PX00068P07|AK045391|3313					AK045391	Itga6		ILMN_1236600	004060450	S	3132	ACCAAACTCCAGGCTCATTTGGGATTGGGATTTTTGCCTTGCCTTGTGGC						The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits [goid 33627] [evidence IDA]; Any process that activates or increases the rate or extent of cell adhesion to another cell [goid 22409] [evidence IDA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IMP]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IGI]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IPI]		
Mus musculus	RefSeq	ILMN_243310	ILMN_243310	CHAT	NM_009891.1	NM_009891.1		12647	45476574	NM_009891.1	Chat	NP_034021.1	ILMN_2827248	006110692	S	2607	GGCAGAGGCTAGCTCCCTCCACACACTCACATGCACAAAGACAGCCCAAG	14	-	31237365-31237414	14qB	Mus musculus choline acetyltransferase (Chat), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The specific actions or reactions of an organism that recur with measured regularity [goid 7622] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The biological process by which a synapse between a motor neuron and a muscle is initially formed [goid 7529] [evidence IMP]; Any process involved in the generation of rhythmic, synchronous excitatory synaptic inputs in a neural circuit [goid 43179] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + choline = CoA + O-acetylcholine [goid 4102] [evidence IMP]	B230380D24Rik	B230380D24Rik
Mus musculus	RefSeq	ILMN_215045	ILMN_309958	LOC100047998	XM_001479497.1	XM_001479497.1		100047998	149256972	XM_001479497.1	LOC100047998	XP_001479547.1	ILMN_2654896	006520619	S	83	GTGCCTCCCTCCGGAAAATGGTGAAGAAAATTGAAATCAGCCAGCACGCC					PREDICTED: Mus musculus similar to ribosomal protein L37a (LOC100047998), mRNA.					
Mus musculus	RefSeq	ILMN_223559	ILMN_223559	POLD2	NM_008894.1	NM_008894.1		18972	6679412	NM_008894.1	Pold2	NP_032920.1	ILMN_2817892	001740670	S	1269	CCGGAATGTCCTCACGTCTACTTCTGTGGCAACACCCCCAGCTTTGGTTC	11	-	5772686-5772735	11qA1	Mus musculus polymerase (DNA directed), delta 2, regulatory subunit (Pold2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	po1D2; 50kDa; p50	po1D2; 50kDa; p50
Mus musculus	RefSeq	ILMN_193226	ILMN_193226	V1RB6	NM_020522.1	NM_020522.1		107797	10048465	NM_020522.1	V1rb6	NP_065268.1	ILMN_1254242	006040209	S	450	ATCAATTATTGCTACCCCCAATTTAACTTCAAATATTTTTATGTATGTTA					Mus musculus vomeronasal 1 receptor, B6 (V1rb6), mRNA.				V1r4; mV1R4; mV1R6	V1r4; mV1R4; mV1R6
Mus musculus	Riken	ILMN_203984	ILMN_203984	ITGA4	ri|A530082M10|PX00143A05|AK041096|2315					AK041096	Itga4		ILMN_1232028	003360369	S	2259	CCAAGGGGCAGACCTGGGCTCATAGAAGACTCACAGACTTGTGCATTCAG						The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence IMP]		
Mus musculus	RefSeq	ILMN_190307	ILMN_247038	RASL10B	NM_001013386.2	NM_001013386.2		276952	145386572	NM_001013386.2	Rasl10b	NP_001013404.1	ILMN_2468981	001230209	S	3292	TAGCCCCCTCACCCTTTCCTCTTCACCCCAGGTCTTGGATTTCAGGTCCC				11qC	Mus musculus RAS-like, family 10, member B (Rasl10b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Gm729; VTS58635; B230331P10Rik	Gm729; VTS58635; B230331P10Rik
Mus musculus	RefSeq	ILMN_213346	ILMN_213346	1300014I06RIK	NM_025831.3	NM_025831.3		66895	115292444	NM_025831.3	1300014I06Rik	NP_080107.3	ILMN_1219591	004880132	S	1195	CTCACTGCCGACTTAGGGAACATTCCTCTTGGTCACATGGCCCTGACTCC	13	-	34720337-34720386	13qA3.3	Mus musculus RIKEN cDNA 1300014I06 gene (1300014I06Rik), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190031	ILMN_238385	ZFP108	NM_018791.1	NM_018791.1		54678	9055387	NM_018791.1	Zfp108	NP_061261.1	ILMN_1243011	000460543	S	2045	GAAAATGCACACCACAGAGAGGATCTAGATCTGCAGCATCTGCAAAGCCG	7	+	25046903-25046933:25046934-25046949	7qA3	Mus musculus zinc finger protein 108 (Zfp108), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210153	ILMN_210153	SMC3	NM_007790.2	NM_007790.2		13006	36031034	NM_007790.2	Smc3	NP_031816.2	ILMN_2602761	004390364	S	2834	GCCATAAATCATGATACTAAAGAGCTGGAGAAGATGACCAACCGGCAAGG	19	+	53715348-53715397	19qD2	Mus musculus structural maintenace of chromosomes 3 (Smc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Mmip1; SmcD; Cspg6; Bamacan; HCAP	Mmip1; SmcD; Cspg6; Bamacan; HCAP
Mus musculus	RefSeq	ILMN_210153	ILMN_210153	SMC3	NM_007790.2	NM_007790.2		13006	36031034	NM_007790.2	Smc3	NP_031816.2	ILMN_1223531	004210347	S	2547	GAATTAAACTAGAAGGCATTATTACTCGAGTAGAGACTTACCTGAATGAG	19	+	53713214-53713263	19qD2	Mus musculus structural maintenace of chromosomes 3 (Smc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Mmip1; SmcD; Cspg6; Bamacan; HCAP	Mmip1; SmcD; Cspg6; Bamacan; HCAP
Mus musculus	RefSeq	ILMN_210153	ILMN_210153	SMC3	NM_007790.2	NM_007790.2		13006	36031034	NM_007790.2	Smc3	NP_031816.2	ILMN_2678413	000070161	S	2993	CGAAAACTGGAGCAATGCAACACAGAGTTAAAGAAGTACAGCCACGTGAA	19	+	53715595-53715644	19qD2	Mus musculus structural maintenace of chromosomes 3 (Smc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Mmip1; SmcD; Cspg6; Bamacan; HCAP	Mmip1; SmcD; Cspg6; Bamacan; HCAP
Mus musculus	RefSeq	ILMN_210153	ILMN_210153	SMC3	NM_007790.2	NM_007790.2		13006	36031034	NM_007790.2	Smc3	NP_031816.2	ILMN_2604080	001190037	S	4050	GACTAACTTAGTGTAAATGTGGCCTTTGGTCTTTGCAATGGTTAGAAACA	19	+	53719571-53719620	19qD2	Mus musculus structural maintenace of chromosomes 3 (Smc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Mmip1; SmcD; Cspg6; Bamacan; HCAP	Mmip1; SmcD; Cspg6; Bamacan; HCAP
Mus musculus	RefSeq	ILMN_244791	ILMN_244791	AES	NM_010347.2	NM_010347.2		14797	110626093	NM_010347.2	Aes	NP_034477.1	ILMN_2808336	005570497	S	1017	CCCCCAGCTCCGGTTCCCTCAACCACAAAAGAAGGGGACAGAGAGAAAGC				10qC1	Mus musculus amino-terminal enhancer of split (Aes), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	Grg; Grg5; AL024115	Grg; Grg5; AL024115
Mus musculus	MEEBO	ILMN_187830	ILMN_187830	A630036P20RIK	scl00320666.1_313						A630036P20Rik		ILMN_2447483	002940431	S	5	CTCTACATTGCATTTCCCCCAACATGTCCTGAAAGAAAACCTTTTACCCA										
Mus musculus	RefSeq	ILMN_198280	ILMN_198280	LOC271521	XM_195077.3	XM_195077.3			38083609	XM_195077.3	LOC271521		ILMN_1240382	005700110	S	502	GAGCGCCTGTTCTCGCCGTTCTCTCTGCCCCTGGAGTACTGGAATCAGTT										
Mus musculus	RefSeq	ILMN_200317	ILMN_200317	LOC386213	XM_359121.1	XM_359121.1			38081294	XM_359121.1	LOC386213		ILMN_1253108	006450431	S	532	CACTTAGGTCGGTTCTGGGAGCCCAAGTTCAAACGAGTTCACCGAAGGCC										
Mus musculus	RefSeq	ILMN_211693	ILMN_331554	LOC100045343	XR_031575.1	XR_031575.1		100045343	149262147	XR_031575.1	LOC100045343		ILMN_2674281	001570291	S	1729	TGCCCAGAAGTTTACAGTGCTGAAGCTGGACTGCCTAACACCTGACACTC					PREDICTED: Mus musculus similar to CDNA sequence BC046404 (LOC100045343), misc RNA.					
Mus musculus	RefSeq	ILMN_196363	ILMN_196363	AW061290	NM_201361.1	NM_201361.1		381110	41235740	NM_201361.1	AW061290	NP_958749.1	ILMN_3131609	003890164	A	507	TCAACGCTCAGCAACAAGTAACAGCTCAGAGGAGGCAGAAAGTGAAGGGG	17	+	79530050-79530098:79558628-79558628	17qE3	Mus musculus expressed sequence AW061290 (AW061290), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			MGC37733	MGC37733
Mus musculus	RefSeq	ILMN_196363	ILMN_196363	AW061290	NM_201361.1	NM_201361.1		381110	41235740	NM_201361.1	AW061290	NP_958749.1	ILMN_3054840	001030209	I	1465	GCCTTCTAGACCCACTGCACTATGAGACAAATCATGTTCTTTGGAGGCAG	17	+	79590141-79590190	17qE3	Mus musculus expressed sequence AW061290 (AW061290), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			MGC37733	MGC37733
Mus musculus	RefSeq	ILMN_213761	ILMN_213761	S100A9	NM_009114.1	NM_009114.1		20202	6677836	NM_009114.1	S100a9	NP_033140.1	ILMN_2803674	001980603	S	355	GGCAAAGGCTGTGGGAAGTAATTAAGAGGTCAGCCATGTGACTGCTGCCC	3	-	90778643-90778672:90778673-90778692	3qF1	Mus musculus S100 calcium binding protein A9 (calgranulin B) (S100a9), mRNA.		The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins [goid 45113] [evidence IMP]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Cagb; L1Ag; AW546964; p14; MRP14; BEE22; GAGB; 60B8Ag	Cagb; L1Ag; AW546964; p14; MRP14; BEE22; GAGB; 60B8Ag
Mus musculus	RefSeq	ILMN_215339	ILMN_215339	KCNG4	NM_025734.2	NM_025734.2		66733	28076886	NM_025734.2	Kcng4	NP_080010.2	ILMN_2895511	003450239	S	3392	GTGGATACAGTCAGTACTGCGCCCTGCTAACACATTGGTCTTTCCACTAG	8	-	122148118-122148167	8qE1	Mus musculus potassium voltage-gated channel, subfamily G, member 4 (Kcng4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	KV6.4; AW049024; KV6.3; 4921535I01Rik	KV6.4; AW049024; KV6.3; 4921535I01Rik
Mus musculus	RefSeq	ILMN_215339	ILMN_215339	KCNG4	NM_025734.2	NM_025734.2		66733	28076886	NM_025734.2	Kcng4	NP_080010.2	ILMN_1231061	001030634	S	1270	CTTCGTGGTGGAATCCATCTGTGTGGCCTGGTTCTCGCTGGAGTTTTGCC	8	-	122150240-122150289	8qE1	Mus musculus potassium voltage-gated channel, subfamily G, member 4 (Kcng4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	KV6.4; AW049024; KV6.3; 4921535I01Rik	KV6.4; AW049024; KV6.3; 4921535I01Rik
Mus musculus	RefSeq	ILMN_215339	ILMN_215339	KCNG4	NM_025734.2	NM_025734.2		66733	28076886	NM_025734.2	Kcng4	NP_080010.2	ILMN_1233788	005270477	S	3727	GGAATAGGCTAGCACAGTCCTGGTGGGGGGGACCTGGATGTATTCTGAGA	8	-	122147783-122147832	8qE1	Mus musculus potassium voltage-gated channel, subfamily G, member 4 (Kcng4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	KV6.4; AW049024; KV6.3; 4921535I01Rik	KV6.4; AW049024; KV6.3; 4921535I01Rik
Mus musculus	Riken	ILMN_201875	ILMN_201875	4921517J08RIK	ri|4921517J08|PX00014H24|AK014910|1872					AK014910	4921517J08Rik		ILMN_2545271	007000037	S	1261	CTGTCATCTCAGGTACCAGTTCAGGTGTGGTCTGAACTTCCTCCACCAGC										
Mus musculus	Riken	ILMN_205174	ILMN_205174	C230077B03RIK	ri|C230077B03|PX00176P20|AK048863|3239					AK048863	C230077B03Rik		ILMN_1230201	004640138	S	2950	TCACTAGTGCTCTGTAGTATAGCCTGAGGTCAAGGGTGGTGATTTCCACC										
Mus musculus	RefSeq	ILMN_201459	ILMN_201459	LOC385206	XM_358118.1	XM_358118.1			38093995	XM_358118.1	LOC385206		ILMN_2542366	006860433	S	419	GCTACAGCATCAGGCACACCCACGTCCTGAAAGAATGCAATCAATTGAAG										
Mus musculus	RefSeq	ILMN_197042	ILMN_234183	CDC42BPA	XM_994182.1	XM_994182.1		226751	94365916	XM_994182.1	Cdc42bpa	XP_999276.1	ILMN_1215162	003190678	S	501	CTCCACTATGTTCACAGGTTCTCAGAGACAGTAGTGCTTAACACTGGCCC				1qH4	PREDICTED: Mus musculus Cdc42 binding protein kinase alpha, transcript variant 1 (Cdc42bpa), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The directed movement of the nucleus [goid 7097] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200454	ILMN_200454	LOC384300	XM_357553.1	XM_357553.1			38082012	XM_357553.1	LOC384300		ILMN_2538817	000840593	S	290	TGATCTGGATCCTTCTGATTGGAGACCTTAAGAAGATGAATGTTCATACC										
Mus musculus	Riken	ILMN_204993	ILMN_204993	9330140N01RIK	ri|9330140N01|PX00105N09|AK034014|2338					AK034014	9330140N01Rik		ILMN_1221899	006520445	S	2030	CAGAGAACATCCTGTATAGTCCCCCTCCCCCAGAGGCTGAACAGAGGCTG										
Mus musculus	RefSeq	ILMN_198610	ILMN_322834	LOC667776	XR_033448.1	XR_033448.1		667776	149271789	XR_033448.1	LOC667776		ILMN_1216681	002120730	S	1374	CTCTGATGCCCGATGGAACCCTTGGATTGACCCCATCAACAACTGAACAG	X	-	77779194-77779243	XqB	PREDICTED: Mus musculus similar to Non-POU-domain-containing, octamer binding protein (LOC667776), misc RNA.					
Mus musculus	RefSeq	ILMN_213644	ILMN_251981	MGAM	XM_986926.1	XM_986926.1		232714	94378571	XM_986926.1	Mgam	XP_992020.1	ILMN_1215251	006130605	S	1687	CTGCTAGTTGGCATGGGGAGTAGACCAATATGCTGAGAGTGTAATGGAGG				6qB1	PREDICTED: Mus musculus maltase-glucoamylase, transcript variant 1 (Mgam), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of terminal 1,4-linked alpha-D-glucose residues successively from non-reducing ends of the chains with release of beta-D-glucose [goid 4339] [evidence IEA]; Catalysis of the hydrolysis of amylose or an amylose derivative [goid 16160] [evidence IDA]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213891	ILMN_319143	LOC100046274	XM_001475918.1	XM_001475918.1		100046274	149256774	XM_001475918.1	LOC100046274	XP_001475968.1	ILMN_2641914	005670114	S	29	TCCTCACCATCTTGCTGAGCCTGGCAGAAACACCGGAATCTGCACCTGCT					PREDICTED: Mus musculus similar to zinc finger protein 371 (LOC100046274), mRNA.					
Mus musculus	MEEBO	ILMN_223341	ILMN_223341	1700040N02RIK	scl19855.8.1_62	XM_149229.1			20861974	XM_149229.1	1700040N02Rik		ILMN_1237050	002490400	S	988	CGTGAGTGAGTATTGACATTCAAGTTCTAGCATCGGATTCTTTCGAGCTG										
Mus musculus	MEEBO	ILMN_191110	ILMN_191110	E130319B15RIK	scl5143.1.1_102				31560872	NM_178663	E130319B15Rik		ILMN_2476189	002000463	S	19	CTTACCGTGACTACTGTTCAGCTTTGTTTAGAAACCCTTTTTATAGGCTT										
Mus musculus	RefSeq	ILMN_217093	ILMN_225832	YDJC	NM_026940.3	NM_026940.3		69101	146141156	NM_026940.3	Ydjc	NP_081216.1	ILMN_1213274	003520440	S	1223	CGTGTTGTAGTTACAACCACTTGTTTAAGAGCAATGGGAAGAGGCTGGTG				16qA3	Mus musculus YdjC homolog (bacterial) (Ydjc), mRNA.				4930521M19Rik; MGC144470	4930521M19Rik; MGC144470
Mus musculus	RefSeq	ILMN_233540	ILMN_233540	MRPL1	NM_001039084.1	NM_001039084.1		94061	84875531	NM_001039084.1	Mrpl1	NP_001034173.1	ILMN_3162866	002060575	I	954	GGAGCTCACCAGGTTTAGTGGTACTTGGGAGTTTACTTCCTTCTGGGGAG	5	+	96668078-96668127	5qE3	Mus musculus mitochondrial ribosomal protein L1 (Mrpl1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AI462572; 2410002L03Rik; 5830418D04Rik	AI462572; 2410002L03Rik; 5830418D04Rik
Mus musculus	RefSeq	ILMN_214184	ILMN_214184	PIGS	NM_201406.1	NM_201406.1		276846	41351528	NM_201406.1	Pigs	NP_958808.1	ILMN_2645262	006480725	S	1609	TGCTATCTACATTCCCCTCTTCCTGCCCATGGCTGTGCCCATCCTCCTGT	11	+	78155399-78155448	11qB5	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class S (Pigs), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor [goid 3923] [evidence IMP]	Gm393; Gm689; BC058979	Gm393; Gm689; BC058979
Mus musculus	MEEBO	ILMN_224190	ILMN_224190	TCEA3	scl24819.10.1_28				32189437	NM_011542	Tcea3		ILMN_2776283	003780300	S	1156	GATAAGGTGAAGAAGACCCAGCAGGAAGCACAGACCACGTGACCCAGAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201060	ILMN_253310	ZFP575	NM_001033205.3	NM_001033205.3		101544	146198677	NM_001033205.3	Zfp575	NP_001028377.1	ILMN_1228789	006250400	S	608	ACCCGCCCGCACCCGTGCCCCGACTGTCCCAAGGCCTTCTCCTACCCGTC				7qA3	Mus musculus zinc finger protein 575 (Zfp575), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI326876; Znf575	AI326876; Znf575
Mus musculus	RefSeq	ILMN_201045	ILMN_253310	ZFP575	NM_001033205.3	NM_001033205.3		101544	146198677	NM_001033205.3	Zfp575	NP_001028377.1	ILMN_2540888	002850491	S	668	GCGCACCGCCTCACGCACAGCGGAGCTCGCCCGCACTCCTGCCCGCACTG				7qA3	Mus musculus zinc finger protein 575 (Zfp575), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI326876; Znf575	AI326876; Znf575
Mus musculus	RefSeq	ILMN_213805	ILMN_213805	KLK4	NM_019928.1	NM_019928.1		56640	9910515	NM_019928.1	Klk4	NP_064312.1	ILMN_2858200	002630598	S	1076	GGAGTGGAACCCACCTGCATTTTCCTCTGTGTGCAGTGTCCTCTAGTAGC	7	+	51141013-51141062	7qB4	Mus musculus kallikrein related-peptidase 4 (prostase, enamel matrix, prostate) (Klk4), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	ESMP1; PSTS; KLK-L1; Prss17	ESMP1; PSTS; KLK-L1; Prss17
Mus musculus	RefSeq	ILMN_222028	ILMN_222028	4930513O06RIK	XM_136059.4	XM_136059.4		75125	94408277	XM_136059.4	4930513O06Rik	XP_136059.1	ILMN_1214144	004290674	S	694	TTAACAACACTGATTTGGTTTACATTTCATCACCCTTAAAAGTCCTATAT	X	+	135627834-135627883	XqF1	PREDICTED: Mus musculus RIKEN cDNA 4930513O06 gene (4930513O06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_258754	ILMN_258754	APOL7B	NM_001024848.1	NM_001024848.1		278679	85701567	NM_001024848.1	Apol7b	NP_001020019.1	ILMN_2887215	000610110	S	1204	TCAGGACCTAGAGCAGAAGTTACAGGAGCTCATTCGGGTCCATGACAGCC	15	-	77253612-77253613:77253614-77253661	15qE1	Mus musculus apolipoprotein L 7b (Apol7b), mRNA.					
Mus musculus	RefSeq	ILMN_189241	ILMN_189241	TNPO1	NM_178716.3	NM_178716.3		238799	115385967	NM_178716.3	Tnpo1	NP_848831.2	ILMN_1213915	003060543	S	53	ATTTCAGGCCCCGGACGGGAGGCAGCGCCGCTTCGGCAGAAAGGCCCGAG	13	-	99696237-99696286	13qD1	Mus musculus transportin 1 (Tnpo1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	TRN; IPO2; MIP; MIP1; AU021749; D13Ertd688e; Kpnb2	TRN; IPO2; MIP; MIP1; AU021749; D13Ertd688e; Kpnb2
Mus musculus	RefSeq	ILMN_237725	ILMN_237725	DNAJC11	NM_172704.1	NM_172704.1		230935	27370019	NM_172704.1	Dnajc11	NP_766292.1	ILMN_2944621	000290240	S	3063	CCAGAAAGAGCCTGTCGCTCTGTGTTTCCTGTGATGATATTAACTGCCCC	4	+	150819706-150819755	4qE2	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 11 (Dnajc11), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	E030019A03Rik	E030019A03Rik
Mus musculus	RefSeq	ILMN_212791	ILMN_212791	KRT8	NM_031170.2	NM_031170.2		16691	114145560	NM_031170.2	Krt8	NP_112447.2	ILMN_1221157	000240438	S	1501	GGCTGTGGTTGTGAAGAAGATTGAAACCCGAGATGGGAAGCTGGTGTCCG	15	-	101827396-101827445	15qF3	Mus musculus keratin 8 (Krt8), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence TAS]; A series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor [goid 33209] [evidence IMP]; A series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor [goid 33209] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC118110; AU019895; AL022697; AA960620; Krt-2.8; K8; EndoA; Card2; Krt2-8	MGC118110; AU019895; AL022697; AA960620; Krt-2.8; K8; EndoA; Card2; Krt2-8
Mus musculus	RefSeq	ILMN_215898	ILMN_215898	GP49A	NM_008147.1	NM_008147.1		14727	6680052	NM_008147.1	Gp49a	NP_032173.1	ILMN_1236609	004120356	S	814	TCCTCATCGGATACCAGTGTCGTCACAAAAATAAGGCTAATGCTTCTGTG	10	+	51203646-51203684:51204323-51204333	10qB3	Mus musculus glycoprotein 49 A (Gp49a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			gp49	gp49
Mus musculus	RefSeq	ILMN_225516	ILMN_225516	SLA	NM_009192.2	NM_009192.2		20491	71067131	NM_009192.2	Sla	NP_033218.1	ILMN_3043669	005360112	I	14	CATTGACTCTCTACTGCCAACTCCCAGGAGAGGCCATGGTCTGCGTCTAA	15	-	66644092-66644141	15qD2	Mus musculus src-like adaptor (Sla), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Slap; Slap-1	Slap; Slap-1
Mus musculus	RefSeq	ILMN_225516	ILMN_225516	SLA	NM_009192.2	NM_009192.2		20491	71067131	NM_009192.2	Sla	NP_033218.1	ILMN_3118707	000110064	A	2414	TGTCACACAAGGTCAGTAACTTCTGCTATGAGGCCATGATCTCTGGCTCC	15	-	66612588-66612637	15qD2	Mus musculus src-like adaptor (Sla), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Slap; Slap-1	Slap; Slap-1
Mus musculus	RefSeq	ILMN_200173	ILMN_200173	LOC385867	XM_358976.1	XM_358976.1			38080782	XM_358976.1	LOC385867		ILMN_1250400	000430671	S	15	GCTGCTCCCGGAGGTAGTTCACATTGGAGGAACCCAGACAGAGAAGCAAC										
Mus musculus	RefSeq	ILMN_196615	ILMN_196615	ASH1L	NM_138679.2	NM_138679.2			46518492	NM_138679.2	Ash1l		ILMN_2657037	005420673	S	1859	GTGGCTCCATTTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCTGAAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215191	ILMN_313568	BC024659	XM_001472442.1	XM_001472442.1		108934	149264188	XM_001472442.1	BC024659	XP_001472492.1	ILMN_1258099	007210577	S	620	ATCTGCTCGCCAGAGAAGGCCACCTGTTGACGCCGGCCACTGAGCAGACA	13	+	41368083-41368125:41368126-41368132	13qA3.3	PREDICTED: Mus musculus cDNA sequence BC024659 (BC024659), mRNA.					
Mus musculus	RefSeq	ILMN_215191	ILMN_313568	BC024659	XM_001472442.1	XM_001472442.1		108934	149264188	XM_001472442.1	BC024659	XP_001472492.1	ILMN_1245259	004040202	S	3988	AGTCCTCAGAGCATGGAGATATGCTCAGGTGACTGTAGAATGGCACTGGG	13	+	41371451-41371500	13qA3.3	PREDICTED: Mus musculus cDNA sequence BC024659 (BC024659), mRNA.					
Mus musculus	RefSeq	ILMN_196652	ILMN_237868	RNF207	NM_001033489.1	NM_001033489.1		433809	85702020	NM_001033489.1	Rnf207	NP_001028661.1	ILMN_1237330	007200592	S	1731	CACCATTGTCACCAAGCAGATCACGCCCTACATACGCTCCATTGCCAGGG	4	-	151685514-151685563	4qE2	Mus musculus ring finger protein 207 (Rnf207), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm143; D330010C22Rik	Gm143; D330010C22Rik
Mus musculus	RefSeq	ILMN_237868	ILMN_237868	RNF207	NM_001033489.1	NM_001033489.1		433809	85702020	NM_001033489.1	Rnf207	NP_001028661.1	ILMN_2823733	000650239	S	1970	ACCAAGACCACCTCAGACCCAAGTTGGAAGCCGGAGATGAGGGGTGGAGA	4	-	151681574-151681623	4qE2	Mus musculus ring finger protein 207 (Rnf207), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm143; D330010C22Rik	Gm143; D330010C22Rik
Mus musculus	RefSeq	ILMN_228973	ILMN_228973	EG545929	NM_001034904.1	NM_001034904.1		545929	85702263	NM_001034904.1	EG545929	NP_001030076.1	ILMN_2954522	003940088	S	276	GTTAGACTACAGACTGACAGAAGCTGTAAGTTGATTGGAATGCAACTGGC	7	-	22696905-22696940:22700409-22700422	7qA3	Mus musculus predicted gene, EG545929 (EG545929), mRNA.			Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	Riken	ILMN_205524	ILMN_205524	EBF	ri|D130048P03|PX00184O22|AK051438|3984					AK051438	Ebf		ILMN_2573212	002970246	S	3821	AACCCCAGCCTGTGCCCAATGATCCAGGTATTTGGGCTGTGCAGACATGG										
Mus musculus	RefSeq	ILMN_213268	ILMN_312311	8430432A02RIK	XM_001472309.1	XM_001472309.1		71524	149233943	XM_001472309.1	8430432A02Rik	XP_001472359.1	ILMN_1233013	006200438	S	1400	GCCCCCTTTAGGTCATGCCTAGACTGTGAAACATGCTTGGGTATCTTCAT					PREDICTED: Mus musculus RIKEN cDNA 8430432A02 gene (8430432A02Rik), mRNA.					
Mus musculus	MEEBO	ILMN_214102	ILMN_214102	2310031L18RIK	scl0068014.2_271	NM_026507.2			31560160	NM_026507.2	2310031L18Rik		ILMN_1258242	004120437	S	1619	GAAGAGGGTGAAAACAGTGTGGCAACTGAGTGACAGCTCCCCTGTAGACC										
Mus musculus	MEEBO	ILMN_214102	ILMN_214102	2310031L18RIK	scl0068014.2_271	NM_026507.2			31560160	NM_026507.2	2310031L18Rik		ILMN_2755434	006450327	S	1621	AGAGGGTGAAAACAGTGTGGCAACTGAGTGACAGCTCCCCTGTAGACCAT										
Mus musculus	Riken	ILMN_203160	ILMN_203160	9030614H07RIK	ri|9030614H07|PX00061G23|AK033541|2560					AK033541	9030614H07Rik		ILMN_1241972	000730278	S	1760	CTCTCCCAGGAAAGTTGAGCCCAGGAGCTAACAATCAGGATACCGCCTGC										
Mus musculus	RefSeq	ILMN_251992	ILMN_251992	FOLR2	NM_008035.1	NM_008035.1		14276	6679824	NM_008035.1	Folr2	NP_032061.1	ILMN_2865285	005360113	S	757	CAAACACAGCACCCTGTCACACGTTTGAGTACTACTTCCCGACACCAGCC	7	-	108988909-108988958	7qE3	Mus musculus folate receptor 2 (fetal) (Folr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane [goid 6620] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence TAS]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [evidence TAS]	FR-P3; Folbp-2; Folbp2; FBP2	FR-P3; Folbp-2; Folbp2; FBP2
Mus musculus	RefSeq	ILMN_200642	ILMN_200642	LOC384453	XM_357655.1	XM_357655.1			38084606	XM_357655.1	LOC384453		ILMN_2539486	003190292	S	215	AGTGTTCGTTCGAGCTACCGCCTGGAGCCCTGGACGGCCTGCTGCGGGCA										
Mus musculus	MEEBO	ILMN_186514	ILMN_186514	5330439K02RIK	scl46724.2_224						5330439K02Rik		ILMN_2436168	002070670	S	19	CCTGAAGAATGGGACAGAAAGCAGCGACAGACAACCCAGAGCCCAGAGGA										
Mus musculus	RefSeq	ILMN_187186	ILMN_256792	ARGLU1	NM_176849.3	NM_176849.3		234023	134152668	NM_176849.3	Arglu1	NP_789819.2	ILMN_2594128	002710767	S	1484	CCCAGGGTTTGACTGGACCTGCGGTGTTGTTAGAGCAGTGTCCTTGGGAT	8	-	8666754-8666803	8qA1.1	Mus musculus arginine and glutamate rich 1 (Arglu1), mRNA.				C130008N12	C130008N12
Mus musculus	RefSeq	ILMN_218293	ILMN_232648	SETMAR	XM_982623.1	XM_982623.1		74729	94378019	XM_982623.1	Setmar	XP_987717.1	ILMN_1237671	000150154	S	1542	TGTATGATTCAGCAAGACCTCAGCCTTGCTTTTTGGCTAGTCTTGCCGGC	6	+	108027046-108027095	6qE1	PREDICTED: Mus musculus SET domain and mariner transposase fusion gene (Setmar), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210674	ILMN_210674	HES6	NM_019479.3	NM_019479.3		55927	142369243	NM_019479.3	Hes6	NP_062352.1	ILMN_2608043	007200050	S	180	TGGTGGAGAAGAAGCGACGCGCACGGATCAACGAGAGTCTTCAGGAGCTG	1	-	93309493-93309542	1qD	Mus musculus hairy and enhancer of split 6 (Drosophila) (Hes6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AI326893	AI326893
Mus musculus	RefSeq	ILMN_246650	ILMN_246650	2310002B14RIK	NM_027105.1	NM_027105.1		69533	21312309	NM_027105.1	2310002B14Rik	NP_081381.1	ILMN_2796595	007100280	S	587	GGCCCTCAGACCATTCACATTGTGTCAAACAGCCTGAGACCTCTGCAGCC	16	-	88536019-88536068	16qC3.3	Mus musculus RIKEN cDNA 2310002B14 gene (2310002B14Rik), mRNA.				AI507462	AI507462
Mus musculus	RefSeq	ILMN_211895	ILMN_211895	SMUG1	NM_027885.3	NM_027885.3		71726	133892229	NM_027885.3	Smug1	NP_082161.2	ILMN_2620520	000770646	S	3290	CATGGCCCATGATCTCGACCAGTTATACCTCCACAGTGACCCTAGCCAGC	15	-	102983992-102984041	15qF3	Mus musculus single-strand selective monofunctional uracil DNA glycosylase (Smug1), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence ISS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases present in single-stranded DNA [goid 17065] [evidence ISS]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence ISA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence ISA]; Catalysis of the removal of oxidized bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 702] [evidence ISA]	A930006H09Rik; C85220; 1200013B09Rik	A930006H09Rik; C85220; 1200013B09Rik
Mus musculus	RefSeq	ILMN_244365	ILMN_244365	A230067G21RIK	NM_001033348.1	NM_001033348.1		241694	85701839	NM_001033348.1	A230067G21Rik	NP_001028520.1	ILMN_3160621	000830452	S	4113	TCTCCATCCCCACTGAGTCCAAGGGTATGAGAAATGCAACTTGGCTATGG				2qG1	Mus musculus RIKEN cDNA A230067G21 gene (A230067G21Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	BC053994	BC053994
Mus musculus	RefSeq	ILMN_212822	ILMN_212822	ALDH1A2	NM_009022.2	NM_009022.2		19378	31982069	NM_009022.2	Aldh1a2	NP_033048.1	ILMN_2630749	006330008	S	1653	TGCCTCACAACAAGTGAGCTTCAGCCTGCAGAGGGGGAGGTGTGAAGCAA	9	+	71094252-71094301	9qD	Mus musculus aldehyde dehydrogenase family 1, subfamily A2 (Aldh1a2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to a single longitudinal plane. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 9855] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IDA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IGI]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [evidence IDA]; Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal [goid 1758] [evidence IDA]	Raldh1; AV116159; Aldh1a7; Raldh2; RALDH-2	Raldh1; AV116159; Aldh1a7; Raldh2; RALDH-2
Mus musculus	RefSeq	ILMN_224007	ILMN_248645	OLFR520	NM_147063.2	NM_147063.2		259066	154146236	NM_147063.2	Olfr520	NP_667274.2	ILMN_2773082	006220647	S	901	GATGTCAAAGTGGCCATTACCAAAATTGTTTATCTCAAAGGCATGATGTG				7qE2	Mus musculus olfactory receptor 520 (Olfr520), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR101-1	MOR101-1
Mus musculus	Riken	ILMN_204765	ILMN_204765	B930067P14RIK	ri|B930067P14|PX00164L10|AK047469|4033					AK047469	B930067P14Rik		ILMN_1259268	004480189	S	3692	GAACTCAGGACCTCTGGAAGAACAGCTGAGCCATCTTTCCAGCCCTAGAT										
Mus musculus	RefSeq	ILMN_220722	ILMN_220722	CDX1	NM_009880.2	NM_009880.2		12590	46559385	NM_009880.2	Cdx1	NP_034010.2	ILMN_2863641	003290500	S	1607	CCCCAGACCATGGGGGACTCGCAGCTGTACAGGGCTTATGTAGAGTGGAA	18	-	61178609-61178658	18qE1	Mus musculus caudal type homeo box 1 (Cdx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Cdx; Cdx-1	Cdx; Cdx-1
Mus musculus	RefSeq	ILMN_220722	ILMN_220722	CDX1	NM_009880.2	NM_009880.2		12590	46559385	NM_009880.2	Cdx1	NP_034010.2	ILMN_2725801	006400367	S	1271	GGCTCTGGAGAGTAGGCGGCATTGAAAGAAGGTGGTACACCAGAGTCTAG	18	-	61178945-61178994	18qE1	Mus musculus caudal type homeo box 1 (Cdx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Cdx; Cdx-1	Cdx; Cdx-1
Mus musculus	MEEBO	ILMN_217812	ILMN_217812	COL1A1	scl012842.26_28	NM_007742.2			34328107	NM_007742.2	Col1a1		ILMN_2687872	000010279	S	4243	CCAACGAGATCGAGCTCAGAGGCGAAGGCAACAGTCGCTTCACCTACAGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence ISO]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IDA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]		
Mus musculus	Riken	ILMN_202875	ILMN_202875	A130052K02RIK	ri|A130052K02|PX00123D08|AK037821|1197					AK037821	A130052K02Rik		ILMN_1259519	002070128	S	545	CCAAGCTGGGGTGGGGGTGGGGAGAAAGCATGCAAAATCAAGGTACAGAG										
Mus musculus	RefSeq	ILMN_234896	ILMN_234896	OLFR675	NM_001011848.1	NM_001011848.1		258147	58801453	NM_001011848.1	Olfr675	NP_001011848.1	ILMN_3160759	001170048	S	880	GGGGTAAGGACCAAGCAAATTCGGGAGCAAGTAATGAGGATTTTGTTCCG	7	-	112172551-112172600	7qE3	Mus musculus olfactory receptor 675 (Olfr675), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR32-9P	MOR32-9P
Mus musculus	RefSeq	ILMN_215417	ILMN_215417	RPL22	NM_009079.2	NM_009079.2		19934	31543603	NM_009079.2	Rpl22	NP_033105.1	ILMN_2659229	004640239	S	1771	GCGTTTCCTTCCAACTTCAGGTGCAGCCCCCCTCGTGGTTAGCGGTCTTA	4	+	151707909-151707958	4qE2	Mus musculus ribosomal protein L22 (Rpl22), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of an alpha-beta T cell [goid 46632] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	2700038K18Rik	2700038K18Rik
Mus musculus	RefSeq	ILMN_213839	ILMN_213839	RPL27A	NM_011975.3	NM_011975.3		26451	118601006	NM_011975.3	Rpl27a	NP_036105.2	ILMN_2882059	003310360	S	833	ACTGTGATGGACAGGTAGCTCAGGACGACTGGTCACTTAATACTGGACAG	7	+	116665065-116665114	7qE3	Mus musculus ribosomal protein L27a (Rpl27a), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence IGI]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IGI]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IGI]	L27A; MGC66730; MGC107695	L27A; MGC66730; MGC107695
Mus musculus	RefSeq	ILMN_197746	ILMN_213839	RPL27A	NM_011975.3	NM_011975.3		26451	118601006	NM_011975.3	Rpl27a	NP_036105.2	ILMN_1227653	005360152	S	116	GGCCGCGGGAATGCTGGAGGCATGCACCACCACAGGATCAACTTTGACAA	7	+	116662963-116662967:116663099-116663143	7qE3	Mus musculus ribosomal protein L27a (Rpl27a), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence IGI]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IGI]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IGI]	L27A; MGC66730; MGC107695	L27A; MGC66730; MGC107695
Mus musculus	RefSeq	ILMN_213839	ILMN_213839	RPL27A	NM_011975.3	NM_011975.3		26451	118601006	NM_011975.3	Rpl27a	NP_036105.2	ILMN_2641304	007100707	S	450	GTGCCTGTGTTCTGGTGGCTTAAAAGCCACACCGGAGGTTAATTAAATGC	7	+	116663900-116663949	7qE3	Mus musculus ribosomal protein L27a (Rpl27a), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence IGI]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IGI]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IGI]	L27A; MGC66730; MGC107695	L27A; MGC66730; MGC107695
Mus musculus	RefSeq	ILMN_213839	ILMN_213839	RPL27A	NM_011975.3	NM_011975.3		26451	118601006	NM_011975.3	Rpl27a	NP_036105.2	ILMN_1221403	007400243	S	858	CGACTGGTCACTTAATACTGGACAGATTAGCATGGAAAACTTAAGGGGAG	7	+	116665090-116665139	7qE3	Mus musculus ribosomal protein L27a (Rpl27a), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence IGI]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IGI]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IGI]	L27A; MGC66730; MGC107695	L27A; MGC66730; MGC107695
Mus musculus	RefSeq	ILMN_210085	ILMN_210085	NME4	NM_019731.1	NM_019731.1		56520	9790122	NM_019731.1	Nme4	NP_062705.1	ILMN_1233339	007510070	S	580	GGGCTTGCACTGCCTTCTGCACTTCAGGTCTACCCATGACCTACTACCTC	17	-	26228923-26228972	17qA3.3	Mus musculus non-metastatic cells 4, protein expressed in (Nme4), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	5730493H09Rik; Nm23M4; NM23-M4; 2810024O08Rik; 2610027N22Rik	5730493H09Rik; Nm23M4; NM23-M4; 2810024O08Rik; 2610027N22Rik
Mus musculus	RefSeq	ILMN_210085	ILMN_210085	NME4	NM_019731.1	NM_019731.1		56520	9790122	NM_019731.1	Nme4	NP_062705.1	ILMN_2786229	005910064	S	417	CGGGACAATCAGGGGCGACTTCAGTGTTCACATCAGCAGGAACGTCATCC	17	-	26229086-26229097:26230562-26230599	17qA3.3	Mus musculus non-metastatic cells 4, protein expressed in (Nme4), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	5730493H09Rik; Nm23M4; NM23-M4; 2810024O08Rik; 2610027N22Rik	5730493H09Rik; Nm23M4; NM23-M4; 2810024O08Rik; 2610027N22Rik
Mus musculus	RefSeq	ILMN_210085	ILMN_210085	NME4	NM_019731.1	NM_019731.1		56520	9790122	NM_019731.1	Nme4	NP_062705.1	ILMN_1244161	007160349	S	263	AGCACTACCGGGACCTACAGAGGAAGCCATTCTACCCAGCTCTTATCAGC	17	-	26230833-26230882	17qA3.3	Mus musculus non-metastatic cells 4, protein expressed in (Nme4), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	5730493H09Rik; Nm23M4; NM23-M4; 2810024O08Rik; 2610027N22Rik	5730493H09Rik; Nm23M4; NM23-M4; 2810024O08Rik; 2610027N22Rik
Mus musculus	RefSeq	ILMN_199101	ILMN_259095	EG625029	XM_889573.3	XM_889573.3		625029	149260945	XM_889573.3	EG625029	XP_894666.1	ILMN_1218214	001030414	S	2483	GGCCAGAGAGGAACACAGTCCATCACATTAGGGATGAAAGACATGATAGG	10	+	78954826-78954875	10qC1	PREDICTED: Mus musculus predicted gene, EG625029 (EG625029), mRNA.					
Mus musculus	RefSeq	ILMN_202537	ILMN_219568	BSN	NM_007567.2	NM_007567.2		12217	124487406	NM_007567.2	Bsn	NP_031593.2	ILMN_1247629	002510603	S	12540	GGTGACACTGGAGCAGACGTCCACATGGCCAGCATGGGTTTGGGAGAACT	9	-	108001700-108001749	9qF2	Mus musculus bassoon (Bsn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence ISO]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219568	ILMN_219568	BSN	NM_007567.2	NM_007567.2		12217	124487406	NM_007567.2	Bsn	NP_031593.2	ILMN_2710597	000610524	S	11604	CCTGCTGCCAGCCAACCAGCGGGGAAACCTCAGCCAGGCCCCACCACAGC	9	-	108007355-108007404	9qF2	Mus musculus bassoon (Bsn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence ISO]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208890	ILMN_208890	H2-BL	NM_008199.1	NM_008199.1		14963	6680144	NM_008199.1	H2-Bl	NP_032225.1	ILMN_2590520	001980156	S	1225	GCAGCAGAAAAATAGCCATCCTTCCTGGTCCAGCAGGCACTAAGGGATCA	17	-	36217233-36217268:36217944-36217957	17qB1	Mus musculus histocompatibility 2, blastocyst (H2-Bl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The process of protecting a cell from natural killer cell mediated cytotoxicity [goid 42270] [evidence IDA]		H2-B1	H2-B1
Mus musculus	RefSeq	ILMN_222308	ILMN_313672	LOC100048042	XM_001479397.1	XM_001479397.1		100048042	149267919	XM_001479397.1	LOC100048042	XP_001479447.1	ILMN_2747771	001470195	S	740	GTTCAATACAAGTGTTTACCATTATGACTGTTCTTATTTCTTACACATTT					PREDICTED: Mus musculus similar to olfactory receptor MOR183-2 (LOC100048042), mRNA.					
Mus musculus	MEEBO	ILMN_193177	ILMN_193177	UREB1	scl54549.37_1				51772494	XM_136108	Ureb1		ILMN_2613475	001940671	S	437	ATTAAGGCAAAGGACAAAATACCAAAATGGAAATGTAAAATACCATATCC										
Mus musculus	RefSeq	ILMN_187712	ILMN_251259	TNR	NM_022312.2	NM_022312.2		21960	141802380	NM_022312.2	Tnr	NP_071707.1	ILMN_1252176	006770670	S	4586	GGAAAGGCCATGAATTCTCCATCCCCTTTGTAGAAATGAAGATGAGGCCC	1	+	161854244-161854293	1qH1-qH2.1	Mus musculus tenascin R (Tnr), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with sphingolipids, a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 46625] [evidence TAS]	TN-R; restrictin; janusin	TN-R; restrictin; janusin
Mus musculus	RefSeq	ILMN_190365	ILMN_220648	OVCA2	NM_027136.3	NM_027136.3		246257	133891831	NM_027136.3	Ovca2	NP_081412.1	ILMN_2469527	002900356	S	1216	CCCCAAACTCCTCAAACGTAAAACTTTCTGATTCTAAGTGACCAAGATAT	11	-	74990821-74990870	11qB5	Mus musculus candidate tumor suppressor in ovarian cancer 2 (Ovca2), mRNA.				9030414M07Rik; RP23-143A14.5	9030414M07Rik; RP23-143A14.5
Mus musculus	RefSeq	ILMN_220648	ILMN_220648	OVCA2	NM_027136.3	NM_027136.3		246257	133891831	NM_027136.3	Ovca2	NP_081412.1	ILMN_2724815	000520706	S	2387	TAACAGCTTGGGTGGGGGATTGGTCTCTGTGCCTTGTTCTTGCCTTACAG	11	-	74989650-74989699	11qB5	Mus musculus candidate tumor suppressor in ovarian cancer 2 (Ovca2), mRNA.				9030414M07Rik; RP23-143A14.5	9030414M07Rik; RP23-143A14.5
Mus musculus	Riken	ILMN_206821	ILMN_206821	TRRP6	ri|D930029H23|PX00202O09|AK086446|1520					AK086446	Trrp6		ILMN_2582925	006650689	S	1171	GCCCCTGGCAGGCTGTGAGCACTTGTGTAGTAGACCTACAGTATTTCTGG										
Mus musculus	RefSeq	ILMN_222106	ILMN_222106	CDCA3	NM_013538.4	NM_013538.4		14793	141801801	NM_013538.4	Cdca3	NP_038566.1	ILMN_1225182	001050170	S	847	TTTGCCTTGTTGGAGAGCTAGGGCTGTGCTGGAGTCATCCCCAAGGGCAC	6	+	124779094-124779115:124779116-124779143	6qF2	Mus musculus cell division cycle associated 3 (Cdca3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410005A12Rik; Grcc8; C8; Tome-1	2410005A12Rik; Grcc8; C8; Tome-1
Mus musculus	Riken	ILMN_207427	ILMN_207427	4921531D08RIK	ri|4921531D08|PX00639A19|AK076602|2505					AK076602	4921531D08Rik		ILMN_1252454	004900372	S	2059	GCAGCAGGGATGACACATGACTGATCACACAACTGAGCTGCATCCGTACC										
Mus musculus	RefSeq	ILMN_195337	ILMN_195337	XRN1	NM_011916.2	NM_011916.2		24127	115495454	NM_011916.2	Xrn1	NP_036046.2	ILMN_2514674	000450097	S	4754	CCCATATTTACAAATTATCCTCCTGCGGTACCACCTGGAGCCGTCCCTCC	9	+	95948793-95948842	9qE3.3	Mus musculus 5'-3' exoribonuclease 1 (Xrn1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence NAS]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence NAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence NAS]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence TAS]	Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of an RNA molecule [goid 4534] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end [goid 8409] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mXrn1; Dhm2; exo	mXrn1; Dhm2; exo
Mus musculus	Riken	ILMN_202244	ILMN_202244	4930447K03RIK	ri|4930447K03|PX00031L01|AK015408|1033					AK015408	4930447K03Rik		ILMN_1225767	003440026	S	962	TCTACACTAGCTTGGCCCGGTGGACGGTAGCCACACCCAAATTCCTTGGC										
Mus musculus	MEEBO	ILMN_190183	ILMN_190183	CD8B	scl26166.1_3				6753357	NM_009858	Cd8b		ILMN_1257694	001500181	S	12	CTCTGTAGCTCTTAGCTTTCCCATCTTTCCCTGCAAGGCCACACCGTGCA										
Mus musculus	RefSeq	ILMN_193018	ILMN_239825	SERPINB9F	NM_183197.1	NM_183197.1		20709	60593100	NM_183197.1	Serpinb9f	NP_899020.1	ILMN_2493397	001230010	S	1650	CATTTTCCTTTCTGCCTACTACTCACCAGGTATGTTCCCAATACTATGGT	13	+	33426977-33427026	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 9f (Serpinb9f), mRNA.				ovalbumin; MGC61007; NK21L1; Spi13; NK21; BC052216	ovalbumin; MGC61007; NK21L1; Spi13; NK21; BC052216
Mus musculus	RefSeq	ILMN_215529	ILMN_215529	KIF5B	NM_008448.2	NM_008448.2		16573	61657920	NM_008448.2	Kif5b	NP_032474.2	ILMN_2660650	004120161	S	708	GGGAATTATTCCAAGAATAGTGCAAGATATTTTTAATTATATTTACTCCA	18	-	6226890-6226939	18qA1	Mus musculus kinesin family member 5B (Kif5b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence TAS]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43227] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 7028] [evidence IMP]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence TAS]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence TAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL022807; KHC	AL022807; KHC
Mus musculus	RefSeq	ILMN_215529	ILMN_215529	KIF5B	NM_008448.2	NM_008448.2		16573	61657920	NM_008448.2	Kif5b	NP_032474.2	ILMN_2768396	006400341	S	3368	TCCTTGGGATTGTAGAAATTTAATTTTTTAATGTGTAAATTACTCCTACC	18	-	6203591-6203640	18qA1	Mus musculus kinesin family member 5B (Kif5b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence TAS]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43227] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 7028] [evidence IMP]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence TAS]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence TAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL022807; KHC	AL022807; KHC
Mus musculus	Riken	ILMN_206226	ILMN_206226	D130083E16RIK	ri|D130083E16|PX00186L22|AK084070|1564					AK084070	D130083E16Rik		ILMN_1225211	007040288	S	1225	GTGGGCACTACCGTGTAACCAAACTCCTGCTGGACAAGAGAGCCAACCCG										
Mus musculus	RefSeq	ILMN_216942	ILMN_216942	RELB	NM_009046.2	NM_009046.2		19698	31982052	NM_009046.2	Relb	NP_033072.2	ILMN_1246841	003060647	S	1855	AGGGCCTGAAGCCACGTAGCCTCTGAGGTAACAGAGGAGGCACTGGGTGA	7	-	20191870-20191901:20191902-20191919	7qA3	Mus musculus avian reticuloendotheliosis viral (v-rel) oncogene related B (Relb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence IMP]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; The process whereby a relatively unspecialized T cell acquires the specialized features of a Th1 cell [goid 45063] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MGC143683; MGC143684	MGC143683; MGC143684
Mus musculus	RefSeq	ILMN_235308	ILMN_235308	AOX3L1	NM_001008419.1	NM_001008419.1		213043	56606022	NM_001008419.1	Aox3l1	NP_001008419.1	ILMN_3162470	006840202	S	4490	TGATGCCTTTGACCAGGAGCCACTGAGCCTTAGCAGGGCGAGGTTTCTGC	1	+	58435822-58435871	1qC1.3	Mus musculus aldehyde oxidase 3-like 1 (Aox3l1), mRNA.			Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]	Aoh3	Aoh3
Mus musculus	RefSeq	ILMN_187429	ILMN_317906	LOC100047683	XR_033828.1	XR_033828.1		100047683	149257378	XR_033828.1	LOC100047683		ILMN_1235734	002510538	S	2351	CTGAAGGGACCATTTCTGAAGCAACCATAAAAACCCCCTCCTCACACGGT					PREDICTED: Mus musculus hypothetical protein LOC100047683 (LOC100047683), misc RNA.					
Mus musculus	RefSeq	ILMN_212042	ILMN_310687	5430432N15RIK	XM_001476117.1	XM_001476117.1		74490	149257304	XM_001476117.1	5430432N15Rik	XP_001476167.1	ILMN_2622089	004890739	S	2073	GGAGCCTCTGCCTCCACCTCGCGCTGGAAGGATGACTGTCTAGTGAATTA	7	+	52901048-52901097	7qB4	PREDICTED: Mus musculus RIKEN cDNA 5430432N15 gene (5430432N15Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209715	ILMN_209715	SNCG	NM_011430.2	NM_011430.2		20618	142386371	NM_011430.2	Sncg	NP_035560.1	ILMN_2598478	007200021	S	109	GTGTTGTGGGTGCTGTAGAAAAGACCAAGCAGGGAGTAACGGAGGCAGCT	14	-	35187678-35187727	14qB	Mus musculus synuclein, gamma (Sncg), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IGI]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IGI]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	persyn; C79089	persyn; C79089
Mus musculus	RefSeq	ILMN_219689	ILMN_219689	GHR	NM_010284.2	NM_010284.2		14600	114520599	NM_010284.2	Ghr	NP_034414.2	ILMN_1253504	004610451	S	4050	TGGTACTTTGCTGGCCACACAAGCCGTTATTCACCGTTTAACTAGTTGTG	15	-	3267835-3267884	15qA1	Mus musculus growth hormone receptor (Ghr), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with any peptide with hormonal activity in animals [goid 17046] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with growth hormone to initiate a change in cell activity [goid 4903] [evidence IDA]	GHBP; AA986417; GHR/BP	GHBP; AA986417; GHR/BP
Mus musculus	RefSeq	ILMN_187340	ILMN_252421	1700028M03RIK	XM_899790.3	XM_899790.3		69460	149251239	XM_899790.3	1700028M03Rik	XP_904883.1	ILMN_2443272	003830278	S	186	CAGTGCAGAGTAACTGCGCGGGAAGTGGGCCGGATGAACACTCCTTTAGC	3	-	83364560-83364577:83364578-83364609	3qE3	PREDICTED: Mus musculus RIKEN cDNA 1700028M03 gene (1700028M03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198700	ILMN_198700	LOC332538	XM_288265.2	XM_288265.2			38086926	XM_288265.2	LOC332538		ILMN_1258577	000770524	S	735	TAGGTGCATTCTAGCCTCGGTCGTTGACTACCTAAAAGGCACTGCCCAGC										
Mus musculus	RefSeq	ILMN_211005	ILMN_211005	BCAP31	NM_012060.2	NM_012060.2		27061	31981309	NM_012060.2	Bcap31	NP_036190.2	ILMN_2871262	003610424	S	730	GGCTATGCAGAAGCAGTCTGAGGGCCTTACCAAAGAATATGACCGCCTGC	X	-	69940578-69940627	XqA7.3	Mus musculus B-cell receptor-associated protein 31 (Bcap31), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IPI]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IPI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Bap31	Bap31
Mus musculus	MEEBO	ILMN_222200	ILMN_222200	OLFR915	scl36018.1_153				22129278	NM_146785	Olfr915		ILMN_2777134	000070671	S	399	TATTGTCATGTCTCCTAAATTATGTTTGAACCTCATACTTGGCTCATATA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217433	ILMN_217433	B4GALT3	NM_020579.1	NM_020579.1		57370	10181157	NM_020579.1	B4galt3	NP_065604.1	ILMN_1228544	000360102	S	1048	CGCCTGGCTGGGATGAAGATCTCTCGACCACCTACCTCTGTGGGACACTA	1	+	173206017-173206066	1qH3	Mus musculus UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 (B4galt3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine [goid 3945] [evidence IEA]	9530061M23Rik; R74981; ESTM6; AW125175; ESTM26; AA104562	9530061M23Rik; R74981; ESTM6; AW125175; ESTM26; AA104562
Mus musculus	RefSeq	ILMN_217433	ILMN_217433	B4GALT3	NM_020579.1	NM_020579.1		57370	10181157	NM_020579.1	B4galt3	NP_065604.1	ILMN_2930764	007570370	S	1791	ATGGTTCCTAAGAAGCTGTCTGGTGGAGGAAACCCCTAGCCGGGCATTTC	1	+	173206879-173206928	1qH3	Mus musculus UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 (B4galt3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine [goid 3945] [evidence IEA]	9530061M23Rik; R74981; ESTM6; AW125175; ESTM26; AA104562	9530061M23Rik; R74981; ESTM6; AW125175; ESTM26; AA104562
Mus musculus	RefSeq	ILMN_234977	ILMN_234977	P2RX7	NM_001038839.1	NM_001038839.1		18439	84781761	NM_001038839.1	P2rx7	NP_001033928.1	ILMN_3144200	005820348	A	350	ACCAAGGTCAAAGGCATAGCAGAGGTGACGGAGAATGTCACAGAGGGTGG	5	+	123102797-123102846	5qF	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7 (P2rx7), transcript variant 3, mRNA.	The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IMP]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The formation of a pore complex, a small opening in a membrane that allows the passage of liquids and/or gases [goid 46931] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; The process by which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome [goid 1845] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus [goid 51602] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 alpha from a cell or group of cells [goid 50717] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein in a multicellular organism, occurring at the tissue, organ, or organismal level [goid 44254] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; The directed movement of nicotinamide adenine dinucleotide into, out of, within or between cells; transport may be of either the oxidized form, NAD, or the reduced form, NADH [goid 43132] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51901] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid [goid 14054] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of glutamate [goid 14049] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a prostaglandin from a cell or group of cells [goid 32308] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluid shear stress stimulus. Fluid shear stress is the force acting on an object in a system where the fluid is moving across a solid surface [goid 34405] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production [goid 32731] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic substance stimulus [goid 14070] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; The assembly of a bleb, a cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32060] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; The evagination of a membrane, resulting in formation of a vesicle [goid 6900] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IDA]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the plasma membrane [goid 7009] [evidence IDA]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IDA]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The transfer of a phospholipid from its site of synthesis to the plasma membrane [goid 6649] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IMP]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence ISO]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence IMP]; Interacting selectively with lipopolysaccharide [goid 1530] [evidence IDA]	AI467586	AI467586
Mus musculus	RefSeq	ILMN_220513	ILMN_220513	PLOD3	NM_011962.2	NM_011962.2		26433	31560515	NM_011962.2	Plod3	NP_036092.1	ILMN_2723058	002470243	S	3096	GGACTTCTGAGGGTCCCCTGCCTGATAAATTATTAAGCTTCCTCAGCCTC	5	+	137472337-137472386	5qG2	Mus musculus procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 (Plod3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2 [goid 8475] [evidence IEA]	AI414586; LH3	AI414586; LH3
Mus musculus	Riken	ILMN_205080	ILMN_205080	D430050F18RIK	ri|D430050F18|PX00195H10|AK052549|1429					AK052549	D430050F18Rik		ILMN_2569838	006900168	S	1270	CAGGAGAGCGGAGAATGTAGCTCAGTGTGTAGAGTGGTAGGTAGCCTAGC										
Mus musculus	RefSeq	ILMN_241141	ILMN_241141	PLAT	NM_008872.1	NM_008872.1		18791	6679374	NM_008872.1	Plat	NP_032898.1	ILMN_3003008	000840600	S	2205	ACAGGGCCTCCACGAGAAGGAAGGGGTATCTGGCCGAATCACAGCACCAT	8	+	23893017-23893066	8qA2	Mus musculus plasminogen activator, tissue (Plat), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The orderly movement of smooth muscle cells from one site to another, often during the development of a multicellular organism [goid 14909] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]	AU020998; t-PA; D8Ertd2e; AW212668; tPA; MGC18508	AU020998; t-PA; D8Ertd2e; AW212668; tPA; MGC18508
Mus musculus	RefSeq	ILMN_214682	ILMN_214682	SSH3	NM_198113.2	NM_198113.2		245857	118130790	NM_198113.2	Ssh3	NP_932781.1	ILMN_1219080	001940594	S	2396	ATTCCACCCTGCGTCTTCCACCCTCTCCTACTGCAGTCCTGGAGACAGCT	19	-	4261950-4261999	19qA	Mus musculus slingshot homolog 3 (Drosophila) (Ssh3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	mSSH-3L; SSH-3; BC028922	mSSH-3L; SSH-3; BC028922
Mus musculus	RefSeq	ILMN_214682	ILMN_214682	SSH3	NM_198113.2	NM_198113.2		245857	118130790	NM_198113.2	Ssh3	NP_932781.1	ILMN_2650725	004610598	S	1536	CCAGAGGAGCCCCTGGCGCCTGAAGTTTCTACACCATTGCCACCTCTTCC	19	-	4263724-4263773	19qA	Mus musculus slingshot homolog 3 (Drosophila) (Ssh3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	mSSH-3L; SSH-3; BC028922	mSSH-3L; SSH-3; BC028922
Mus musculus	RefSeq	ILMN_212549	ILMN_212549	OLFR1260	NM_146981.1	NM_146981.1		258983	22128970	NM_146981.1	Olfr1260	NP_667192.1	ILMN_2627705	002120348	S	744	CTTTGTACCCTGCATATTCGTTTACCTTAGGCCCATGGTCATCTTCCCCT	2	+	89818680-89818729	2qE1	Mus musculus olfactory receptor 1260 (Olfr1260), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR232-2	MOR232-2
Mus musculus	RefSeq	ILMN_229647	ILMN_229647	WHRN	NM_001008795.1	NM_001008795.1		73750	57526166	NM_001008795.1	Whrn	NP_001008795.1	ILMN_3082031	007150059	A	2307	GATGCCTAGGCCTTTGGCTGTGAGGACACAGGAGAGTTCACACAGACTGC	4	-	63076219-63076268	4qC1	Mus musculus whirlin (Whrn), transcript variant 6, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of inner ear receptor cells [goid 60122] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C430046P22Rik; 1110035G07Rik; bM340H1.8; wi; AW742671; mKIAA1526; AW122018	C430046P22Rik; 1110035G07Rik; bM340H1.8; wi; AW742671; mKIAA1526; AW122018
Mus musculus	MEEBO	ILMN_194289	ILMN_194289	2610510H03RIK	scl068215.1_18				29789178	NM_026620	2610510H03Rik		ILMN_1241046	004560091	S	1104	TCAGGAGGCAGAGAAATGAGCCCAGAAAAGGGGACCAGGCTACAGCTCTC										
Mus musculus	RefSeq	ILMN_190773	ILMN_247408	MARS2	NM_175439.3	NM_175439.3		212679	113461994	NM_175439.3	Mars2	NP_780648.1	ILMN_2675740	000580431	S	1798	CGGCTAGTGAAAGCCCACAGGACCTAGGAACTCAGCTCTTACTGACTGGT	1	+	55295818-55295844:55295845-55295867	1qC1.2	Mus musculus methionine-tRNA synthetase 2 (mitochondrial) (Mars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The process of coupling methionine to methionyl-tRNA, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6431] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met) [goid 4825] [evidence IEA]	C730026E21Rik; MetRS	C730026E21Rik; MetRS
Mus musculus	Riken	ILMN_203925	ILMN_203925	9930033H14RIK	ri|9930033H14|PX00120M24|AK036989|5030					AK036989	9930033H14Rik		ILMN_2561029	000940576	S	4827	GTTGAACTGTGGCCATAGATACTTGTAGAGACTGGTGCCGCGCACGAGGC										
Mus musculus	RefSeq	ILMN_223831	ILMN_229866	NOS1	NM_008712.2	NM_008712.2		18125	118130618	NM_008712.2	Nos1	NP_032738.1	ILMN_2770096	004120064	S	4138	ATGTCTGCGGGGACGTTACCATGGCCGCTGATGTCCTCAAAGCCATCCAG	5	+	118399722-118399771	5qF	Mus musculus nitric oxide synthase 1, neuronal (Nos1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51926] [evidence IMP]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43267] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a drug that has originated externally to the cell or organism [goid 42738] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IEA]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+ [goid 4517] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	NO; bNOS; NOS-I; nNOS; Nos-1	NO; bNOS; NOS-I; nNOS; Nos-1
Mus musculus	RefSeq	ILMN_197247	ILMN_197247	LOC380612	XM_358341.1	XM_358341.1			38074767	XM_358341.1	LOC380612		ILMN_2527449	001660347	S	2240	TGTGGCTTCTAACGCCAGTAATATCCTAAAAGGCTCCTGGGGATCATTGG										
Mus musculus	RefSeq	ILMN_193356	ILMN_193356	XRCC3	NM_028875.2	NM_028875.2		74335	142366270	NM_028875.2	Xrcc3	NP_083151.1	ILMN_2496421	003520524	S	2161	TCTTCAGGGCGGCCCTATCCTCTTATGAGCTCATCGTTTCAAAGGCCCCT	12	-	113041615-113041664	12qF1	Mus musculus X-ray repair complementing defective repair in Chinese hamster cells 3 (Xrcc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]	4432412E01Rik; AI182522; AW537713	4432412E01Rik; AI182522; AW537713
Mus musculus	RefSeq	ILMN_220874	ILMN_220874	CAML	NM_007596.2	NM_007596.2		12328	78126154	NM_007596.2	Caml	NP_031622.2	ILMN_2728034	004230497	S	789	AAGGTGAAGACGACGGTGCTGACAGCTGCGCTGTTGCTGTCTGGGATTCC	13	+	55733179-55733228	13qB1	Mus musculus calcium modulating ligand (Caml), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]; The process by which receptor molecules are returned to an active state and in an active cellular location after they have been stimulated by a ligand. An active state is when the receptor is ready to receive a signal [goid 1881] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI385748; Camlg	AI385748; Camlg
Mus musculus	RefSeq	ILMN_198252	ILMN_198252	LOC330189	XM_284126.2	XM_284126.2			38083319	XM_284126.2	LOC330189		ILMN_1228634	006330138	S	748	GGGATGGACAGTCGGTTGGAGGAACAGGGAGCCAGGGATGCTCACATCCA										
Mus musculus	RefSeq	ILMN_250615	ILMN_250615	SEPT14	NM_028820.1	NM_028820.1		74211	110625982	NM_028820.1	Sept14	NP_083096.1	ILMN_2991601	007560201	S	4225	GCCTGTCTCCTAGGACTGAAGATGGAAGTGTCACCCTCCTTTAGTGTCCC	9	-	57100642-57100691	9qB	Mus musculus septin 14 (Sept14), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AA682102; MGC144191; 1700017B05Rik; D9Ertd278e; c15orf39	AA682102; MGC144191; 1700017B05Rik; D9Ertd278e; c15orf39
Mus musculus	RefSeq	ILMN_216366	ILMN_216366	FXN	NM_008044.1	NM_008044.1		14297	6679862	NM_008044.1	Fxn	NP_032070.1	ILMN_3125363	001780626	A	513	CTGGACCGGGAAGAACTGGGTGTACTCTCATGACGGCGTGTCTCTGCATG	19	-	24329082-24329131	19qB	Mus musculus frataxin (Fxn), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [evidence IMP]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IMP]; The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; The series of events by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception is mediated by proprioceptors, sensory nerve terminals found in muscles, tendons, and joint capsules, which give information concerning movements and position of the body. The receptors in the labyrinth are sometimes also considered proprioceptors [goid 19230] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organ of an organism [goid 46621] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [evidence IMP]; The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [evidence IMP]; The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]		FA; X25; FARR; Frda	FA; X25; FARR; Frda
Mus musculus	RefSeq	ILMN_216366	ILMN_216366	FXN	NM_008044.1	NM_008044.1		14297	6679862	NM_008044.1	Fxn	NP_032070.1	ILMN_3049455	001660669	I	109	AGGGAACCGATCGTAACCTGCGGCCGCCGAGGCCTACATGTCACAGTCAA	19	-	24347525-24347574	19qB	Mus musculus frataxin (Fxn), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [evidence IMP]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IMP]; The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; The series of events by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception is mediated by proprioceptors, sensory nerve terminals found in muscles, tendons, and joint capsules, which give information concerning movements and position of the body. The receptors in the labyrinth are sometimes also considered proprioceptors [goid 19230] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organ of an organism [goid 46621] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [evidence IMP]; The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [evidence IMP]; The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]		FA; X25; FARR; Frda	FA; X25; FARR; Frda
Mus musculus	RefSeq	ILMN_215063	ILMN_215063	PTPRE	NM_011212.3	NM_011212.3		19267	153945813	NM_011212.3	Ptpre	NP_035342.3	ILMN_1254630	006400138	S	444	GACCCTGGTGCATCCCAGCCGCTGCTCACCTGGCTGCTGCTGCCCCTGCT				7qF3	Mus musculus protein tyrosine phosphatase, receptor type, E (Ptpre), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	PTPe; PTPepsilon	PTPe; PTPepsilon
Mus musculus	RefSeq	ILMN_215063	ILMN_215063	PTPRE	NM_011212.3	NM_011212.3		19267	153945813	NM_011212.3	Ptpre	NP_035342.3	ILMN_2655123	004180053	S	5256	TTATGGTTCCAACTCTCATATATTATTCCTTGATCACATTTATCGTTTGA				7qF3	Mus musculus protein tyrosine phosphatase, receptor type, E (Ptpre), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	PTPe; PTPepsilon	PTPe; PTPepsilon
Mus musculus	RefSeq	ILMN_216105	ILMN_216105	PDHA2	NM_008811.1	NM_008811.1		18598	6679262	NM_008811.1	Pdha2	NP_032837.1	ILMN_2667428	007100370	S	1977	CCACTTTCTGTTTTAACATTAAAAGCATTGTGTTGCATACTACTATGAAT	3	-	140873293-140873342	3qH1	Mus musculus pyruvate dehydrogenase E1 alpha 2 (Pdha2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]; Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2 [goid 4739] [evidence IEA]	Pdhal	Pdhal
Mus musculus	MEEBO	ILMN_188373	ILMN_188373	1110028C15RIK	scl16672.1.1_95						1110028C15Rik		ILMN_2452131	003400402	S	4	GTCTAATAATGTTCGTTAATTGATACACTTGCCTGAATATAACTGTGACA										
Mus musculus	MEEBO	ILMN_191512	ILMN_191512	PILRA	scl25867.6_686				23943819	NM_153510	Pilra		ILMN_2479717	001990176	S	19	CACACTTGGATTCTAGCCTTGGGTCAGCTATGTATTCAGCATGGGTGGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199821	ILMN_199821	LOC383951	XM_357344.1	XM_357344.1			38077658	XM_357344.1	LOC383951		ILMN_2536603	005090477	S	427	CAGTTTGGCCCCAATGGAGCCCATACTCCAGGCCATCCTCCTCAAAGGTA										
Mus musculus	MEEBO	ILMN_221328	ILMN_221328	PTGDS	scl19558.7.10_4	NM_008963.1			35215297	NM_008963.1	Ptgds		ILMN_1248316	005570672	S	522	CTGAAGGACGAGCTGAAGGAGAAATTCACCACCTTTAGCAAGGCCCAGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process that modulates the frequency, rate or extent of sleep; a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals [goid 45187] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-9-alpha,15-dihydroxy-11-oxoprosta-5,13-dienoate [goid 4667] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211692	ILMN_211692	OLFR694	NM_146452.1	NM_146452.1		258444	33238883	NM_146452.1	Olfr694	NP_666663.1	ILMN_1231923	003310594	S	885	GGAGGTCACTGGGGCTTTGAGGCGAGTCCTGGGGAAAAGGTTCTCAGTAC	7	-	113832309-113832358	7qE3	Mus musculus olfactory receptor 694 (Olfr694), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR283-9	MOR283-9
Mus musculus	RefSeq	ILMN_215759	ILMN_215759	PXT1	NM_153390.1	NM_153390.1		69307	23510246	NM_153390.1	Pxt1	NP_700439.1	ILMN_2663291	001440369	S	501	CTCTGTGCGGAGCTGAAAGGAGCCGGGTCTCCAGTACGCAGCCCTGAGCC	17	-	29074375-29074398:29074429-29074454	17qA3.3	Mus musculus peroxisomal, testis specific 1 (Pxt1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]			Stepp; 1700001G18Rik	Stepp; 1700001G18Rik
Mus musculus	RefSeq	ILMN_210885	ILMN_210885	A630007B06RIK	NM_170757.1	NM_170757.1		213993	25072200	NM_170757.1	A630007B06Rik	NP_739563.1	ILMN_2610167	002750364	S	2519	AAGTGCATTTGAGTAGACGCGGTGGCATCATGGCGTCCTTGTACACATCC	19	-	56866532-56866581	19qD2	Mus musculus RIKEN cDNA A630007B06 gene (A630007B06Rik), mRNA.				AI159700; 1810028B20Rik; Otg1	AI159700; 1810028B20Rik; Otg1
Mus musculus	RefSeq	ILMN_210885	ILMN_210885	A630007B06RIK	NM_170757.1	NM_170757.1		213993	25072200	NM_170757.1	A630007B06Rik	NP_739563.1	ILMN_2695125	004880162	S	2178	GACTGAGAATGGAAACCACGATAAAGACATTAGCAGTATGGGAAGTCGCT	19	-	56869591-56869640	19qD2	Mus musculus RIKEN cDNA A630007B06 gene (A630007B06Rik), mRNA.				AI159700; 1810028B20Rik; Otg1	AI159700; 1810028B20Rik; Otg1
Mus musculus	Riken	ILMN_201622	ILMN_201622	ELOVL3	ri|1300004I20|R000010P16|AK004901|1348					AK004901	Elovl3		ILMN_2543285	006770110	S	571	ACCGTGTGCTTTGCCCTCTACACGGATGACGCCGTAGTCAGATTCTGGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]			
Mus musculus	RefSeq	ILMN_200882	ILMN_200882	LOC382250	XM_358720.1	XM_358720.1			38086804	XM_358720.1	LOC382250		ILMN_2540335	003370601	S	379	TGGCCCTGGCCTAGTGGCCCTAGAAAAGAAGTAAAGGCCCAGCCTTCAGT										
Mus musculus	RefSeq	ILMN_200088	ILMN_200088	LOC385757	XM_358932.1	XM_358932.1			38080296	XM_358932.1	LOC385757		ILMN_1219949	006110521	S	281	GGCCACGTCAGAGAAGCACCCCTGTGCATCAGCAGTTCAAGTTGCCTCAC										
Mus musculus	MEEBO	ILMN_195732	ILMN_195732	9330179O15RIK	scl50918.4.1_2						9330179O15Rik		ILMN_1234016	001410328	S	17	CTACTGGTTTCAACGTGATTCCAAAAGAAACATGATGTGCTCATTCCCGC										
Mus musculus	RefSeq	ILMN_222504	ILMN_222504	MTMR9	NM_177594.1	NM_177594.1		210376	33563377	NM_177594.1	Mtmr9	NP_808262.1	ILMN_2750578	005220730	S	2131	GCCTGTTAGGCCCTCCACTTAATGAGCAGGTGGTGCTGTCACCTCACTAC	14	-	64142674-64142723	14qD1	Mus musculus myotubularin related protein 9 (Mtmr9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Modulates the activity of an enzyme [goid 30234] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mMTMH3; LIP-STYX; MGC54783; MTMR8; AF073881; 9430075G12Rik; AA516943	mMTMH3; LIP-STYX; MGC54783; MTMR8; AF073881; 9430075G12Rik; AA516943
Mus musculus	Riken	ILMN_203117	ILMN_203117	SEC8	ri|4432416A01|PX00011L07|AK014499|2596					AK014499	Sec8		ILMN_1258588	004760768	S	1926	GCAGAGGAACAAGGGCACTAAGTCGGAACCAGCCCAATTACTGTGTTCAG										
Mus musculus	MEEBO	ILMN_209260	ILMN_209260	RPS3	scl027050.3_42	NM_012052.1			6755371	NM_012052.1	Rps3		ILMN_2594103	003400615	S	462	TGGATGGTCTGATGATTCACAGTGGAGACCCTGTTAACTACTATGTCGAC						A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200757	ILMN_200757	LOC381853	XM_355865.1	XM_355865.1			38085921	XM_355865.1	LOC381853		ILMN_1213259	006270379	S	892	GATCGTGGGACGCTCAGAAAAGGGCCACTTCCGCTGCTACCTGCTTCTTG										
Mus musculus	RefSeq	ILMN_196318	ILMN_236180	PKIG	NM_001039390.1	NM_001039390.1		18769	86476071	NM_001039390.1	Pkig	NP_001034479.1	ILMN_1253384	002190484	S	59	GAGGCTGTTGTAGACCTTCAGAGGTGATCAGAGAGAGAGGATTACACTAG	2	+	163484902-163484951	2qH3	Mus musculus protein kinase inhibitor, gamma (Pkig), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of proteins from the cytoplasm into the nucleus [goid 42308] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IDA]	PKIgamma	PKIgamma
Mus musculus	MEEBO	ILMN_192692	ILMN_192692	2810408B13RIK	scl0076371.1_313						2810408B13Rik		ILMN_2490430	000430647	S	4	AGAGAAACCTTACAAGTGTATTCAGTGTATGTAAGTCTTTTCAAAACATT										
Mus musculus	RefSeq	ILMN_201871	ILMN_311562	4930528A17RIK	XM_001475370.1	XM_001475370.1		67735	149252190	XM_001475370.1	4930528A17Rik	XP_001475420.1	ILMN_1231706	003870377	S	1221	CCCAATCTGGCCCTAGCTTTACCCACGAATTGCCAGTCTTTGCCAACCTC				4qA3	PREDICTED: Mus musculus RIKEN cDNA 4930528A17 gene (4930528A17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212821	ILMN_253113	PHF20L1	NM_001081409.1	NM_001081409.1		239510	124487194	NM_001081409.1	Phf20l1	NP_001074878.1	ILMN_1254531	006900682	S	3241	GGAGTTGGAGCCACCAGATCCCCTTGCAAGACTGCCCCAACTTAAACGTC	15	+	66473388-66473437	15qD2	Mus musculus PHD finger protein 20-like 1 (Phf20l1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	CGI-72; E130113K22Rik	CGI-72; E130113K22Rik
Mus musculus	RefSeq	ILMN_186810	ILMN_253113	PHF20L1	NM_001081409.1	NM_001081409.1		239510	124487194	NM_001081409.1	Phf20l1	NP_001074878.1	ILMN_1218892	005820471	S	5566	CCATGTGTGGAGTACGGACTCCCCTAGTGGAAAGTTCATACCTTATTTCA	15	+	66475713-66475762	15qD2	Mus musculus PHD finger protein 20-like 1 (Phf20l1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	CGI-72; E130113K22Rik	CGI-72; E130113K22Rik
Mus musculus	RefSeq	ILMN_199668	ILMN_199668	LOC383807	XM_357267.1	XM_357267.1			38075842	XM_357267.1	LOC383807		ILMN_1254127	000620017	S	354	TGTAAGTCCTACTGCTTATCAGGCACCTCTCACCATCCTTGGGCCTGCAT										
Mus musculus	Riken	ILMN_204557	ILMN_204557	H2-T18	ri|B930004K07|PX00162N20|AK046930|2091					AK046930	H2-T18		ILMN_1226467	005050121	S	1846	CAGAGACGCATGCTTGCTTGTTAGTTCTGCAGCTCCACTGTTACTACCTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_210282	ILMN_210282	NSUN5	NM_145414.1	NM_145414.1		100609	21703825	NM_145414.1	Nsun5	NP_663389.1	ILMN_2604056	004830438	S	1205	TCTGAGTACCTTTCCAGGGTCTGAACACTGCCTCCGGGCTTCCCCTGAGA	5	+	135851460-135851509	5qG2	Mus musculus NOL1/NOP2/Sun domain family, member 5 (Nsun5), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Wbscr20; AI326939; Nol1r; 9830109N13Rik; Wbscr20a	Wbscr20; AI326939; Nol1r; 9830109N13Rik; Wbscr20a
Mus musculus	RefSeq	ILMN_210282	ILMN_210282	NSUN5	NM_145414.1	NM_145414.1		100609	21703825	NM_145414.1	Nsun5	NP_663389.1	ILMN_2796028	002120324	S	1103	CCCTTTGCCAAGAAGAGAATGAAGACGTGGTCCAGGAGGCTCTACAGCAC	5	+	135851289-135851338	5qG2	Mus musculus NOL1/NOP2/Sun domain family, member 5 (Nsun5), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Wbscr20; AI326939; Nol1r; 9830109N13Rik; Wbscr20a	Wbscr20; AI326939; Nol1r; 9830109N13Rik; Wbscr20a
Mus musculus	RefSeq	ILMN_254241	ILMN_254241	EG328280	NM_001015506.1	NM_001015506.1		328280	62821800	NM_001015506.1	EG328280	NP_001015506.1	ILMN_2846821	004570520	S	355	CTGCAGGGAAGTGTGGGGAAGGAATCCGCAGTGTCACTACAGCCAGAACT	13	+	68342112-68342161		Mus musculus predicted gene, EG328280 (EG328280), mRNA.				Rslcan24	Rslcan24
Mus musculus	RefSeq	ILMN_217749	ILMN_236267	STRN4	NM_001039878.1	NM_001039878.1		97387	89886485	NM_001039878.1	Strn4	NP_001034967.1	ILMN_2687098	001780215	S	2652	TGCAGAGAGGGGTCTCCTGGGGCCCTCCTATGTGGGCCCCAGGTTGTCCT	7	+	17425836-17425885	7qA2	Mus musculus striatin, calmodulin binding protein 4 (Strn4), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	C80611; ZIN; zinedin	C80611; ZIN; zinedin
Mus musculus	MEEBO	ILMN_224302	ILMN_224302	AP1B1	scl011764.20_169				6671552	NM_007454	Ap1b1		ILMN_1244906	002340121	S	3656	GGCTCCCAGTCTGTGTGTGTGACAGCTATCCTGTCACTGCTGTTTGATAA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210041	ILMN_210041	FBXO24	scl071176.1_325	XM_132440.1			20846640	XM_132440.1	Fbxo24		ILMN_2601629	002190661	S	2086	GCCCTGGAGGAGCCCCTAACCTGACTATCATGAGCGAGAAATTTGATGGA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218841	ILMN_218841	RGN	NM_009060.2	NM_009060.2		19733	118130555	NM_009060.2	Rgn	NP_033086.1	ILMN_2700885	003440437	S	1079	GATATTATAGCATGGTTAAGCTTTAATTTACATCTTTGATTGGGCTCTGG	X	+	20138718-20138767	XqA1.3	Mus musculus regucalcin (Rgn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Modulates the activity of an enzyme [goid 30234] [evidence IEA]	SMP30; AI265316	SMP30; AI265316
Mus musculus	MEEBO	ILMN_217239	ILMN_217239	4930579M01RIK	scl34851.5.1_83	XM_150070.1			20863409	XM_150070.1	4930579M01Rik		ILMN_2680713	001500564	S	641	GACCCGCATCTATTTTTACACATCTGCGGAGCTTGTTTGCCCGCCTCTGG										
Mus musculus	RefSeq	ILMN_222595	ILMN_222595	HTR1D	NM_008309.3	NM_008309.3		15552	142389109	NM_008309.3	Htr1d	NP_032335.2	ILMN_2752064	002070441	S	2727	CGAAGTTAAAACCCACCATCCTGCCGCTCAAGAAGACTGACCGGTACGGG	4	+	136000136-136000185	4qD3	Mus musculus 5-hydroxytryptamine (serotonin) receptor 1D (Htr1d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IDA]	Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 51378] [evidence IDA]	AI853647; Gpcr14	AI853647; Gpcr14
Mus musculus	MEEBO	ILMN_214155	ILMN_214155	4921507K24RIK	scl075716.1_160	XM_149014.1			20849046	XM_149014.1	4921507K24Rik		ILMN_2644873	005080291	S	1369	GGGACCCTTCTTCCATCCAGAGGGCTCTTAGCTAGGAGCACATACTCAAT										
Mus musculus	Riken	ILMN_202925	ILMN_202925	4732472L14RIK	ri|4732472L14|PX00052G12|AK028943|2949					AK028943	4732472L14Rik		ILMN_2553372	006520673	S	839	GTGAGTTCTCTGCCATCTACCAGTTGACTACCCCAGGCCTTCAGATCCCA										
Mus musculus	RefSeq	ILMN_214303	ILMN_214303	JUN	NM_010591.1	NM_010591.1		16476	6754401	NM_010591.1	Jun	NP_034721.1	ILMN_2646625	007560291	S	2782	GCTATCATTGGCTCATACTCTCTCCCCCGGCAACACACAAGTCCAGACTG	4	-	94716047-94716096	4qC5	Mus musculus Jun oncogene (Jun), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues [goid 31953] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby relatively unspecialized cells acquire specialized structural and/or functional features of leading edge cells, cells at the front of a migrating epithelial sheet [goid 35026] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	c-jun; Junc; AP-1	c-jun; Junc; AP-1
Mus musculus	RefSeq	ILMN_223408	ILMN_223408	RQCD1	NM_021383.4	NM_021383.4		58184	148540052	NM_021383.4	Rqcd1	NP_067358.1	ILMN_1223145	007650445	S	2781	ATGCCTTCCTGCTGAGCTGAAGTCTTTCATTCCACTTCACTGGGGGAGCA				1qC3	Mus musculus rcd1 (required for cell differentiation) homolog 1 (S. pombe) (Rqcd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fl10; AI593551; 2610007F23Rik	Fl10; AI593551; 2610007F23Rik
Mus musculus	RefSeq	ILMN_218129	ILMN_246980	OLFR665	NM_146814.1	NM_146814.1		258810	22129232	NM_146814.1	Olfr665	NP_667025.1	ILMN_1223342	000020048	S	838	GCCAACCTGTATCTATTGCTACCTCCCACCTTGAATCCAATTGTATATGG	7	+	112030060-112030109	7qE3	Mus musculus olfactory receptor 665 (Olfr665), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR34-7	MOR34-7
Mus musculus	RefSeq	ILMN_197945	ILMN_197945	LOC381048	XM_358491.1	XM_358491.1			38079781	XM_358491.1	LOC381048		ILMN_2529923	000430100	S	241	GGTGAAATGTCAGGAGAGGAAAAGCTGTGGGTGCCAAGCCTTAGCTACAA										
Mus musculus	RefSeq	ILMN_200270	ILMN_200270	LOC386117	XM_359075.1	XM_359075.1			38081161	XM_359075.1	LOC386117		ILMN_1218079	002480519	S	30	CAACGGAAACCAAGACCACTCACCATCATCAGAACACAGCACTCCAACCC										
Mus musculus	RefSeq	ILMN_223573	ILMN_223573	KATNA1	NM_011835.1	NM_011835.1		23924	6754409	NM_011835.1	Katna1	NP_035965.1	ILMN_2765970	004920152	S	1667	CGGAGTGCTATATTTTTTTAAACTTTCATAATGGTGTGATTTGGAAATTC	10	+	7482862-7482911	10qA1	Mus musculus katanin p60 (ATPase-containing) subunit A1 (Katna1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IPI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with dynein, the multisubunit protein complex that is associated with microtubules [goid 45502] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP [goid 8568] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223573	ILMN_223573	KATNA1	NM_011835.1	NM_011835.1		23924	6754409	NM_011835.1	Katna1	NP_035965.1	ILMN_2998303	005810079	S	1407	TGGCCATGAGACGGCGTATTGAGGGTCTAACCCCAGAAGAAATCCGGAAC	10	+	7482602-7482651	10qA1	Mus musculus katanin p60 (ATPase-containing) subunit A1 (Katna1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IPI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with dynein, the multisubunit protein complex that is associated with microtubules [goid 45502] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP [goid 8568] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220417	ILMN_220417	C85492	NM_153540.3	NM_153540.3		215494	60593062	NM_153540.3	C85492	NP_705768.3	ILMN_2721748	002490612	S	2068	TGAGTAGGCTTGCACTAAGCCTGCTTCCCGAGTGTGCTTTTTGCAGATTT	9	-	121890924-121890973	9qF4	Mus musculus expressed sequence C85492 (C85492), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC31712; Ago61	MGC31712; Ago61
Mus musculus	RefSeq	ILMN_220417	ILMN_220417	C85492	NM_153540.3	NM_153540.3		215494	60593062	NM_153540.3	C85492	NP_705768.3	ILMN_3153225	001430497	A	2185	TCCTGCTTTGGCCTTGGTGTAGGTCCTGGCCTCGAGAAACAGTGGTCACG	9	-	121890807-121890856	9qF4	Mus musculus expressed sequence C85492 (C85492), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC31712; Ago61	MGC31712; Ago61
Mus musculus	RefSeq	ILMN_220417	ILMN_220417	C85492	NM_153540.3	NM_153540.3		215494	60593062	NM_153540.3	C85492	NP_705768.3	ILMN_3074279	006280309	I	1178	GTTACAGTGTCCCTGGAGGACCACACCTTTGCTGATGTCGTGCGGCTGGT	9	-	121891814-121891863	9qF4	Mus musculus expressed sequence C85492 (C85492), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC31712; Ago61	MGC31712; Ago61
Mus musculus	RefSeq	ILMN_192264	ILMN_252224	WDR43	XM_917905.3	XM_917905.3		72515	149269414	XM_917905.3	Wdr43	XP_922998.2	ILMN_1218677	007560044	S	2106	AGAATTAAATGGAGATTCGGATTTAGATCCTGAAAACGAGAGTGAAGAAG				17qE1.3	PREDICTED: Mus musculus WD repeat domain 43, transcript variant 9 (Wdr43), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_192264	ILMN_252224	WDR43	XM_917905.3	XM_917905.3		72515	149269414	XM_917905.3	Wdr43	XP_922998.2	ILMN_1256698	000290300	S	2215	TGCCTATAGCATCCTCCCAGGGAGGCTTGCCCTGTGCCAGAAAACAAGAG				17qE1.3	PREDICTED: Mus musculus WD repeat domain 43, transcript variant 9 (Wdr43), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222552	ILMN_222552	ELL	NM_007924.2	NM_007924.2		13716	124358952	NM_007924.2	Ell	NP_031950.2	ILMN_2751304	002190445	S	2982	CAGAGAGGCGGTGCCTCCAGGTCCTTTCTTAGAGTTTGTCTTCTGTACAC	8	+	73116654-73116703	8qB3.3	Mus musculus elongation factor RNA polymerase II (Ell), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	Men; Ell1	Men; Ell1
Mus musculus	RefSeq	ILMN_213536	ILMN_320770	LOC100043671	XM_001481024.1	XM_001481024.1		100043671	149262012	XM_001481024.1	LOC100043671	XP_001481074.1	ILMN_1258600	003180379	S	1876	TCTGTCCACTTGTTCACAAAGCAGCCTTCACACGTGTCAGTGAGAGTTCG	11	+	84215017-84215066	11qC	PREDICTED: Mus musculus hypothetical protein LOC100043671 (LOC100043671), mRNA.					
Mus musculus	RefSeq	ILMN_210470	ILMN_251528	EG667410	XM_990406.1	XM_990406.1		667410	94375861	XM_990406.1	EG667410	XP_995500.1	ILMN_2605935	001770156	S	1757	GTCCTCAGCATCAGAACTAAACCCTTCACCCCCCTGTCCTTCAGGCTCCC	5	-	149965983-149966032	5qG3	PREDICTED: Mus musculus predicted gene, EG667410 (EG667410), mRNA.					
Mus musculus	Riken	ILMN_202446	ILMN_202446	KCNAB1	ri|4930448C07|PX00031D08|AK015412|1968					AK015412	Kcnab1		ILMN_1234723	007400059	S	361	CCCTGGAACCTTCGTTTCTGATAGGATGGAGAGGATCTGTTTACGGCTTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212884	ILMN_212884	TAS2R134	NM_199158.1	NM_199158.1		387511	46849786	NM_199158.1	Tas2r134	NP_954609.1	ILMN_1247403	001340397	S	791	CCTACATGGGCATCTCACTGCATTCCACCATTCTGATACTAAGCAACACC	2	+	51483821-51483870	2qC1.1	Mus musculus taste receptor, type 2, member 134 (Tas2r134), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence NAS]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence NAS]	Tas2r34; T2R134	Tas2r34; T2R134
Mus musculus	MEEBO	ILMN_189353	ILMN_189353	ENPP3	scl00209558.1_228				51765501	XM_125594	Enpp3		ILMN_2460536	001980086	S	20	TGAGCATCCCTAAGAATCATACCTTGGCCTTTACAAGTTGGCATTTTACT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [evidence IEA]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217597	ILMN_217597	LAD1	NM_133664.2	NM_133664.2		16763	31981554	NM_133664.2	Lad1	NP_598425.2	ILMN_1227260	007380156	S	2322	TTTGCCAACTGCAGAGTTACATGTCTAGCCTGCTCCCAGCAGGCACTCGG	1	+	137649082-137649131	1qE4	Mus musculus ladinin (Lad1), mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	MEEBO	ILMN_212490	ILMN_212490	APG5L	scl38954.10_221	XM_147374.1			20858729	XM_147374.1	Apg5l		ILMN_1217612	003370068	S	1015	AGCAAGGGTGCGGGGCATAAGGCGACTTGTCTCAGGAGCTGTCACAGGAT										
Mus musculus	RefSeq	ILMN_199655	ILMN_241174	GM1337	NM_001081971.1	NM_001081971.1		383787	126517479	NM_001081971.1	Gm1337	NP_001075440.1	ILMN_1259163	002360273	S	1594	GAGAGTGGCCCAGAATTAGAGAACAACGCTCTGCCTTTCTCAGTGCCTGG	2	-	118528056-118528105	2qE5	Mus musculus gene model 1337, (NCBI) (Gm1337), mRNA.					
Mus musculus	RefSeq	ILMN_229399	ILMN_229399	2010003J03RIK	NM_027236.1	NM_027236.1		69860	58037182	NM_027236.1	2010003J03Rik	NP_081512.1	ILMN_2968032	006330204	S	1974	GTCTGTCCTCGCTTGTTGGAAGGCTTTTGCTTCTGGCTATACACTGCTAG	19	+	5371016-5371065	19qA	Mus musculus RIKEN cDNA 2010003J03 gene (2010003J03Rik), mRNA.				AI131644	AI131644
Mus musculus	MEEBO	ILMN_220833	ILMN_220833	PALMD	scl21601.6.1_41	NM_023245.2			18858214	NM_023245.2	Palmd		ILMN_2727481	005080279	S	1866	GCCGTGGTGCCCACCTGAATAACCTCTGAAGGAGAAGCCACGAAATGCCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]			
Mus musculus	RefSeq	ILMN_219994	ILMN_219994	PTGDS2	NM_019455.3	NM_019455.3		54486	142382100	NM_019455.3	Ptgds2	NP_062328.2	ILMN_1225141	006620017	S	699	CCATTAGCTGGCTAGAGGATCCACATACTTCTCACCAATAGGACTGTAAC	6	-	65077140-65077189	6qC1	Mus musculus prostaglandin D2 synthase 2, hematopoietic (Ptgds2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [evidence IDA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-9-alpha,15-dihydroxy-11-oxoprosta-5,13-dienoate [goid 4667] [evidence IDA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence ISO]	MGC151112; H-PGDS; MGC151114	MGC151112; H-PGDS; MGC151114
Mus musculus	RefSeq	ILMN_196927	ILMN_196927	LOC381273	XM_358542.1	XM_358542.1			38049651	XM_358542.1	LOC381273		ILMN_1257035	001710180	S	312	GGCTCCACCATGGACAAGAGGAGCAGTGATCAGAAGAAGCCAGAGCACCC										
Mus musculus	RefSeq	ILMN_222369	ILMN_314100	LOC100048221	XM_001480237.1	XM_001480237.1		100048221	149262212	XM_001480237.1	LOC100048221	XP_001480287.1	ILMN_2748584	005360291	S	1046	GGAAATGCCAGACTGGGACAGGCGAAGGCCTAGAGGAGCCGAAACAGTCT					PREDICTED: Mus musculus similar to Dullard homolog (Xenopus laevis) (LOC100048221), mRNA.					
Mus musculus	RefSeq	ILMN_217326	ILMN_217326	COPA	NM_009938.3	NM_009938.3		12847	142356847	NM_009938.3	Copa	NP_034068.2	ILMN_2681906	005560433	S	4124	CCACTTTCCCCAGCCACGCGAGTTGTTAACTATCCCATCTTTTTCTTGGG	1	+	174052232-174052281	1qH3	Mus musculus coatomer protein complex subunit alpha (Copa), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISO]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISO]; The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine. Pancreatic juice is slightly alkaline and contains numerous enzymes and inactive enzyme precursors including alpha-amylase, chymotrypsinogen, lipase, procarboxypeptidase, proelastase, prophospholipase A2, ribonuclease, and trypsinogen. Its high concentration of bicarbonate ions helps to neutralize the acid from the stomach [goid 30157] [evidence ISO]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU040324; xenin	AU040324; xenin
Mus musculus	Riken	ILMN_204042	ILMN_204042	A830054M12RIK	ri|A830054M12|PX00155B12|AK043938|1575					AK043938	A830054M12Rik		ILMN_1241282	001850209	S	1469	CAAGCGCTGGGGAAGCACGGACGGTAGGGTTGCTTCTTACTTAGTTCAAG										
Mus musculus	RefSeq	ILMN_196365	ILMN_196365	ADNP	NM_009628.2	NM_009628.2		11538	90093348	NM_009628.2	Adnp	NP_033758.2	ILMN_2523844	005290482	S	3502	CTGATGAGTCTTCCCAGAGTGAAGATGCAAGGAGCAGTAAGCCAGCTGCC	2	-	168007816-168007865	2qH3	Mus musculus activity-dependent neuroprotective protein (Adnp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	mKIAA0784; AA589558	mKIAA0784; AA589558
Mus musculus	RefSeq	ILMN_192891	ILMN_196365	ADNP	NM_009628.2	NM_009628.2		11538	90093348	NM_009628.2	Adnp	NP_033758.2	ILMN_2492292	004210487	S	4710	GTGCTGCGTTTGGGATATTTAGTTTCCTCTTTAGTTGAGCACCACTGGGT	2	-	168006608-168006657	2qH3	Mus musculus activity-dependent neuroprotective protein (Adnp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	mKIAA0784; AA589558	mKIAA0784; AA589558
Mus musculus	RefSeq	ILMN_196365	ILMN_196365	ADNP	NM_009628.2	NM_009628.2		11538	90093348	NM_009628.2	Adnp	NP_033758.2	ILMN_2805261	002750168	S	4406	CCTAGCAGAAGCTTGACCCTGCGATAGTATGGACCTTTGGACAGACTTAG	2	-	168006912-168006961	2qH3	Mus musculus activity-dependent neuroprotective protein (Adnp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	mKIAA0784; AA589558	mKIAA0784; AA589558
Mus musculus	RefSeq	ILMN_210731	ILMN_210731	NAB1	NM_008667.2	NM_008667.2		17936	31543306	NM_008667.2	Nab1	NP_032693.2	ILMN_2657093	001980711	S	1936	TTGTAATTTATAGAAACAAGTCTAGGTGTTGATACCTTGTGGTCTAATAG	1	-	52515704-52515753	1qC1.1	Mus musculus Ngfi-A binding protein 1 (Nab1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]; Any process that modulates the frequency, rate or extent of epidermis development [goid 45682] [evidence IGI]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]		
Mus musculus	RefSeq	ILMN_210731	ILMN_210731	NAB1	NM_008667.2	NM_008667.2		17936	31543306	NM_008667.2	Nab1	NP_032693.2	ILMN_2950594	005890039	S	2591	TGTGCACCACCACAGGCTCTAAGCAGTCACATAGATAGTCACTTTTCAAT	1	-	52515049-52515098	1qC1.1	Mus musculus Ngfi-A binding protein 1 (Nab1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]; Any process that modulates the frequency, rate or extent of epidermis development [goid 45682] [evidence IGI]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]		
Mus musculus	RefSeq	ILMN_210731	ILMN_210731	NAB1	NM_008667.2	NM_008667.2		17936	31543306	NM_008667.2	Nab1	NP_032693.2	ILMN_2712635	001300709	S	1207	ATCTGTGCCAACACTCTTCCAGCAGGCCAGAGCCAAGAGCGAGGAGCTTG	1	-	52523736-52523785	1qC1.1	Mus musculus Ngfi-A binding protein 1 (Nab1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]; Any process that modulates the frequency, rate or extent of epidermis development [goid 45682] [evidence IGI]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]		
Mus musculus	RefSeq	ILMN_210731	ILMN_210731	NAB1	NM_008667.2	NM_008667.2		17936	31543306	NM_008667.2	Nab1	NP_032693.2	ILMN_2712634	000730736	S	1204	GAATCTGTGCCAACACTCTTCCAGCAGGCCAGAGCCAAGAGCGAGGAGCT	1	-	52523739-52523788	1qC1.1	Mus musculus Ngfi-A binding protein 1 (Nab1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]; Any process that modulates the frequency, rate or extent of epidermis development [goid 45682] [evidence IGI]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]		
Mus musculus	RefSeq	ILMN_210731	ILMN_210731	NAB1	NM_008667.2	NM_008667.2		17936	31543306	NM_008667.2	Nab1	NP_032693.2	ILMN_2721761	003990438	S	2670	ACACCAGTAAACAGCTTTACTACAACTACAAGGCTTTTCCCTTCCTAGAT	1	-	52514970-52515019	1qC1.1	Mus musculus Ngfi-A binding protein 1 (Nab1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]; Any process that modulates the frequency, rate or extent of epidermis development [goid 45682] [evidence IGI]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]		
Mus musculus	MEEBO	ILMN_188063	ILMN_188063	EIF4A2	scl49311.6_124				7305018	NM_013506	Eif4a2		ILMN_2449506	004540022	S	9	GTAAACAGCAGCTGATGGTTAACAAGTGGATCGTCATATTCAGTAGCTTT							The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210356	ILMN_210356	SAP30BP	NM_020483.3	NM_020483.3		57230	118130518	NM_020483.3	Sap30bp	NP_065229.2	ILMN_2604789	002360445	S	2006	GACGTTGTGTTTGGTATTTGTGTGACCTGGGGACTGACACGCTGCCCATG	11	+	115826768-115826817	11qE2	Mus musculus SAP30 binding protein (Sap30bp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		Hcngp; 2700016D05Rik	Hcngp; 2700016D05Rik
Mus musculus	MEEBO	ILMN_186888	ILMN_186888	COL9A1	scl18118.39_260				31982451	NM_007740	Col9a1		ILMN_2706692	000110372	S	873	TTCATTGTGACCCCCTGAGACCCAGGAGAGAAACCTGTCATGAGCTGCCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A homeostatic process involved in the maintenance of an internal equilibrium within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function [goid 1894] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186888	ILMN_186888	COL9A1	scl18118.39_260				31982451	NM_007740	Col9a1		ILMN_2439360	003990167	S	18	GTGTGTACTGCATCCAATCCCATTTGTATTCTAAAATCCACGTGAAAGCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A homeostatic process involved in the maintenance of an internal equilibrium within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function [goid 1894] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217081	ILMN_217081	BCL2A1C	NM_007535.2	NM_007535.2		12046	113679690	NM_007535.2	Bcl2a1c	NP_031561.2	ILMN_2936165	003520735	S	24	GGCTGAGTACGAGCTCATGCATATCCACTCCCTGGCTGAGCACTACCTTC	9	+	114239276-114239325	9qF3	Mus musculus B-cell leukemia/lymphoma 2 related protein A1c (Bcl2a1c), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		A1-c	A1-c
Mus musculus	RefSeq	ILMN_194623	ILMN_313098	C330024D21RIK	XM_001477456.1	XM_001477456.1		320479	149253746	XM_001477456.1	C330024D21Rik	XP_001477506.1	ILMN_1228708	004280133	S	63	GAACTACTCCAGGGACCGCAGAAACTGCAAGGGAAACACTCCTGCCCTCG				5qC3.1	PREDICTED: Mus musculus RIKEN cDNA C330024D21 gene (C330024D21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223367	ILMN_223367	ARF6	NM_007481.3	NM_007481.3		11845	148238169	NM_007481.3	Arf6	NP_031507.1	ILMN_2763103	007200358	S	1309	GATGCCTTGTGACTTCCAGCAAACGGGGTGGGGTAATAGCAACTCTTGGT				12qC2	Mus musculus ADP-ribosylation factor 6 (Arf6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW496366; MGC102530	AW496366; MGC102530
Mus musculus	RefSeq	ILMN_223277	ILMN_223277	LIPC	NM_008280.2	NM_008280.2		15450	31982277	NM_008280.2	Lipc	NP_032306.2	ILMN_1257106	002600215	S	1688	CCAGGAGAAAGTCTTTGTGAACTGTGAAGTGAAGTCAAAAAGACTGACTG	9	-	70646117-70646166	9qD	Mus musculus lipase, hepatic (Lipc), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IGI]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IGI]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IDA]	HL; Hpl; AI256194	HL; Hpl; AI256194
Mus musculus	MEEBO	ILMN_191032	ILMN_191032	C030011O14RIK	scl21389.13_163				31341321	NM_174868	C030011O14Rik		ILMN_2713004	001470348	S	2684	GAGTCAAAGAAGGCATCCTCACCGAGGTCTGGTGTGCGAGAGCACCTGAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_191032	ILMN_191032	C030011O14RIK	scl21389.13_163				31341321	NM_174868	C030011O14Rik		ILMN_2713008	004150100	S	2688	CAAAGAAGGCATCCTCACCGAGGTCTGGTGTGCGAGAGCACCTGAATGAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_199990	ILMN_199990	LOC384162	XM_357457.1	XM_357457.1			38079585	XM_357457.1	LOC384162		ILMN_1225663	000510630	S	1	ATGACGGAAGGAAATTCCCACCCAGGACCACCAGGAGATGAGAAGCTGCT										
Mus musculus	MEEBO	ILMN_215860	ILMN_215860	1110048D14RIK	scl10474.1.1_78	NM_183120.1			34147112	NM_183120.1	1110048D14Rik		ILMN_2664522	000070088	S	79	CTTTGGCCAAGCACAGTAGGTGATCCTGATAGTCAGCAGCACAGATTCCC										
Mus musculus	RefSeq	ILMN_197004	ILMN_197004	LOC226439	XM_136181.2	XM_136181.2			38073368	XM_136181.2	LOC226439		ILMN_2526561	007100278	S	287	AACCCTTGAGCAACGTACCCTTTCTATTGTACCCCGGCCACTCCGAGCCG										
Mus musculus	RefSeq	ILMN_209913	ILMN_209913	SLC7A6	NM_178798.3	NM_178798.3		330836	118130634	NM_178798.3	Slc7a6	NP_848913.1	ILMN_2600389	005700593	S	3456	GCTGCCAGTTAAAGCCAAAGCAATAGGCGTGAATCTCTGTGAGCAGTGTG	8	+	108722330-108722379	8qD3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 (Slc7a6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	LAT3; AI643885; LAT-2	LAT3; AI643885; LAT-2
Mus musculus	RefSeq	ILMN_200389	ILMN_200389	LOC386396	XM_359202.1	XM_359202.1			38081501	XM_359202.1	LOC386396		ILMN_1242883	001940386	S	27	CAGGTGCTTCTCAGCCATTCGGTATTCTTCAGTTGTGCCAGCACCATTCA										
Mus musculus	RefSeq	ILMN_222704	ILMN_222704	EPGN	NM_053087.2	NM_053087.2		71920	118131191	NM_053087.2	Epgn	NP_444317.1	ILMN_2753623	003850102	S	1568	CCTCAATGCTTCCATCCTCAGCCCCGTTTCTAACCCTCAAATACCCACGA	5	+	91464102-91464151	5qE1	Mus musculus epithelial mitogen (Epgn), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor activity [goid 45741] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA];  [goid 5155] [evidence IDA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IDA]	2310069M11Rik; epigen	2310069M11Rik; epigen
Mus musculus	RefSeq	ILMN_200505	ILMN_200505	LOC384329	XM_357576.1	XM_357576.1			38082865	XM_357576.1	LOC384329		ILMN_2539009	004120066	S	709	GCGAAGCAAGTGGAGGATCTGAACCTGCTGGAGTCTGGAGAGGACATCAC										
Mus musculus	RefSeq	ILMN_219868	ILMN_219868	4930478A21RIK	NM_183109.2	NM_183109.2		75002	110625850	NM_183109.2	4930478A21Rik	NP_898932.2	ILMN_2797098	006770474	S	901	GACATTTCCCCGGTGTCTACAGCAACCCGAGCTTCTTCCAGGAGTGGATG				15qF1	Mus musculus RIKEN cDNA 4930478A21 gene (4930478A21Rik), mRNA.					
Mus musculus	MEEBO	ILMN_193948	ILMN_193948	LTBP2	scl42970.1.243_7				7305242	NM_013589	Ltbp2		ILMN_2501940	003850059	S	13	GACTACCTCTTCATTTCACCTCACAGAGCAAACATCGGCCCCTACAGTGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197940	ILMN_197940	LOC381043	XM_354959.1	XM_354959.1			38079747	XM_354959.1	LOC381043		ILMN_1225394	007650356	S	387	CTCCAGAAGGCCACTCTCGGTGACTATGAAGGGAATCAGGAAGAGAGCCT										
Mus musculus	Riken	ILMN_204778	ILMN_204778	C130033H03RIK	ri|C130033H03|PX00168H07|AK048081|4059					AK048081	C130033H03Rik		ILMN_2567532	007000048	S	3918	GCTTCTGGAATTGAGCAACCAGACATTCTGAAACAAGGTTTGATGCCATG										
Mus musculus	RefSeq	ILMN_210012	ILMN_311219	LOC667251	XR_032081.1	XR_032081.1		667251	149252185	XR_032081.1	LOC667251		ILMN_2715914	006840086	S	1426	TCAATAAAACAGAGGACGATATAATTTGGAGATGTCAGCTAGAGAAGTTG				4qA3	PREDICTED: Mus musculus similar to NADPH cytochrome B5 oxidoreductase (LOC667251), misc RNA.					
Mus musculus	RefSeq	ILMN_201709	ILMN_311219	LOC667251	XR_032081.1	XR_032081.1		667251	149252185	XR_032081.1	LOC667251		ILMN_2543974	006650040	S	1891	CCTGGAGGGTCAGTCATGGCAGCAGGTGCATATGGGAGCCTTTGTTATGA				4qA3	PREDICTED: Mus musculus similar to NADPH cytochrome B5 oxidoreductase (LOC667251), misc RNA.					
Mus musculus	RefSeq	ILMN_211621	ILMN_211621	ALDH16A1	NM_145954.1	NM_145954.1		69748	26080428	NM_145954.1	Aldh16a1	NP_666066.1	ILMN_1245112	002070168	S	2331	TGCAGGAAACCTCAAGTCTGTGTGGGTAAACAGGGGCTTCCCAAGGGCCT	7	-	52397396-52397445	7qB4	Mus musculus aldehyde dehydrogenase 16 family, member A1 (Aldh16a1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	mFLJ00209; FLJ00209; 2410004H02Rik; AI452234; MGC19339	mFLJ00209; FLJ00209; 2410004H02Rik; AI452234; MGC19339
Mus musculus	RefSeq	ILMN_209422	ILMN_209422	SLC22A5	NM_011396.2	NM_011396.2		20520	31981489	NM_011396.2	Slc22a5	NP_035526.1	ILMN_2834916	003360059	S	2628	CTCAAGCTATTTGTCCCTTAGCAGAAGCTTGGGAACTGCCTGTGTTCCCC	11	-	53678428-53678477	11qB1.3	Mus musculus solute carrier family 22 (organic cation transporter), member 5 (Slc22a5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IDA]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IMP]; The directed movement into, out of, within or between cells of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15697] [evidence IDA]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IMP]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The reproductive developmental process whose specific outcome is the progression of structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures [goid 48608] [evidence IMP]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [evidence IDA]; Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [evidence IMP]; Catalysis of the transfer of quaternary ammonium groups from one side of a membrane to the other. Quaternary ammonium groups are any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15651] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Octn2; jvs; Lstpl	Octn2; jvs; Lstpl
Mus musculus	RefSeq	ILMN_209422	ILMN_209422	SLC22A5	NM_011396.2	NM_011396.2		20520	31981489	NM_011396.2	Slc22a5	NP_035526.1	ILMN_2834915	000460220	S	2848	CTCAGAGTAGCTGGCTGCAGTCGTGTCACATCGGTGGGTGTTTTGTGTTC	11	-	53678208-53678257	11qB1.3	Mus musculus solute carrier family 22 (organic cation transporter), member 5 (Slc22a5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IDA]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IMP]; The directed movement into, out of, within or between cells of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15697] [evidence IDA]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IMP]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The reproductive developmental process whose specific outcome is the progression of structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures [goid 48608] [evidence IMP]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [evidence IDA]; Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [evidence IMP]; Catalysis of the transfer of quaternary ammonium groups from one side of a membrane to the other. Quaternary ammonium groups are any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15651] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Octn2; jvs; Lstpl	Octn2; jvs; Lstpl
Mus musculus	RefSeq	ILMN_209422	ILMN_209422	SLC22A5	NM_011396.2	NM_011396.2		20520	31981489	NM_011396.2	Slc22a5	NP_035526.1	ILMN_2651273	005340497	S	568	TTTCGTGGGTGTGCTGATGGGCTCCTTCATTTCAGGACAGCTCTCAGACA	11	-	53697163-53697212	11qB1.3	Mus musculus solute carrier family 22 (organic cation transporter), member 5 (Slc22a5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IDA]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IMP]; The directed movement into, out of, within or between cells of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15697] [evidence IDA]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IMP]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The reproductive developmental process whose specific outcome is the progression of structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures [goid 48608] [evidence IMP]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [evidence IDA]; Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [evidence IMP]; Catalysis of the transfer of quaternary ammonium groups from one side of a membrane to the other. Quaternary ammonium groups are any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15651] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Octn2; jvs; Lstpl	Octn2; jvs; Lstpl
Mus musculus	RefSeq	ILMN_196809	ILMN_196809	LOC212712	XM_136623.1	XM_136623.1			20849972	XM_136623.1	LOC212712		ILMN_1235986	000610053	S	1577	ACCCCATTCTTCCACATAAGCAGGTGAGGGGACAGGGCAAGAGTAGGAGC										
Mus musculus	RefSeq	ILMN_217644	ILMN_217644	MYO15	NM_010862.1	NM_010862.1		17910	6754779	NM_010862.1	Myo15	NP_034992.1	ILMN_2707153	006900095	S	11371	ATCTGCTCCGGCGTCACACTCCAGCCTTCCGCATGTCCTTGCCAGGTGCC	11	+	60341473-60341522	11qB2	Mus musculus myosin XV (Myo15), transcript variant 1, mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	sh2; Myo15a; sh-2	sh2; Myo15a; sh-2
Mus musculus	RefSeq	ILMN_217644	ILMN_217644	MYO15	NM_010862.1	NM_010862.1		17910	6754779	NM_010862.1	Myo15	NP_034992.1	ILMN_2685856	002360020	S	3387	CGGAGAGGAAGGTTTTACGACTCAGCGCCTCGTACCCACTGGTCACATGT	11	+	60293015-60293064	11qB2	Mus musculus myosin XV (Myo15), transcript variant 1, mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	sh2; Myo15a; sh-2	sh2; Myo15a; sh-2
Mus musculus	Riken	ILMN_202363	ILMN_202363	4930504E06RIK	ri|4930504E06|PX00032N02|AK015696|1129					AK015696	4930504E06Rik		ILMN_1246813	005390040	S	922	TAATGGGGATGGGAAGGCCTGGAACACCACACCCAGCTGACGCTCCTCAA										
Mus musculus	RefSeq	ILMN_258229	ILMN_258229	PMFBP1	NM_019938.1	NM_019938.1		56523	9910569	NM_019938.1	Pmfbp1	NP_064322.1	ILMN_2791170	002140397	S	2996	CCGAGGATCTGTGTCAAGGCCTTTCCCCCAAACAAACTGGAGCCTTCCCA	8	+	112430856-112430905	8qD3	Mus musculus polyamine modulated factor 1 binding protein 1 (Pmfbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			1700016D22Rik; Stap; F77	1700016D22Rik; Stap; F77
Mus musculus	RefSeq	ILMN_221899	ILMN_221899	EG328264	NM_177810.3	NM_177810.3		328264	142373360	NM_177810.3	EG328264	NP_808478.1	ILMN_2741781	006270128	S	3041	AGGCGAGAATGACCTCTACAGCGGGGTAATGAAAACTGACCTCCAGCAAG	13	+	60316816-60316865	13qB2	Mus musculus predicted gene, EG328264 (EG328264), mRNA.				A030007L22	A030007L22
Mus musculus	MEEBO	ILMN_210853	ILMN_210853	AI427122	scl0102502.1_105	XM_110660.4			38090002	XM_110660.4	AI427122		ILMN_2609868	004890577	S	3432	GCAGGAGGGAGAGTGTCTGTGTGTTTAGGGTAGACTTTTATAAATGAAGT										
Mus musculus	MEEBO	ILMN_214740	ILMN_214740	MIST1	scl069111.1_92	NM_010800.2			31543251	NM_010800.2	Mist1		ILMN_2651388	002030669	S	3164	CACCAACCTCACGTCAGCACAAGCAGAGAAACCTGACATGTGACGCCTCA										
Mus musculus	RefSeq	ILMN_209544	ILMN_209544	ACTBL2	NM_175497.3	NM_175497.3		238880	141802774	NM_175497.3	Actbl2	NP_780706.1	ILMN_2596812	007000220	S	2491	CTCATGAAGATACTGTTAGACACGTGGGAGGAAGGAATCCCTTCTCTTTC	13	+	112047711-112047760	13qD2.2	Mus musculus actin, beta-like 2 (Actbl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215562	ILMN_315891	LOC100048384	XR_034550.1	XR_034550.1		100048384	149259690	XR_034550.1	LOC100048384		ILMN_1240075	002850014	S	1857	GCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGGAGAGCTTAGAAA					PREDICTED: Mus musculus similar to programmed cell death protein 7 (LOC100048384), misc RNA.					
Mus musculus	RefSeq	ILMN_217396	ILMN_217396	1700113H08RIK	XM_354556.5	XM_354556.5		76640	94388521	XM_354556.5	1700113H08Rik	XP_354556.4	ILMN_2682739	004850402	S	360	CGCCATTGGCCTCTGCAGAAGTGTCAGTCAGAACTACTCTTCCCAGCCGA	10	+	86692773-86692822	10qC1	PREDICTED: Mus musculus RIKEN cDNA 1700113H08 gene (1700113H08Rik), mRNA.					
Mus musculus	Riken	ILMN_203186	ILMN_203186	A930007L02RIK	ri|A930007L02|PX00065G02|AK044328|3023					AK044328	A930007L02Rik		ILMN_2555374	006510731	S	2745	GGATGCCCACGAATAGCTTTGTCAGACTTAGGAGATAGACCAGTGGGTTG										
Mus musculus	RefSeq	ILMN_194391	ILMN_194391	TRP53INP1	NM_021897.1	NM_021897.1		60599	11230805	NM_021897.1	Trp53inp1	NP_068697.1	ILMN_2506012	005260201	S	19	AAACCGTGATTTGTGAGGTTAGAAGTGTGTATTTGGGGGCCTCAGGTGTG	4	+	11083606-11083655	4qA1	Mus musculus transformation related protein 53 inducible nuclear protein 1 (Trp53inp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]		SIP; Stinp; Teap; SIP27; SIP18; 2700057G22Rik	SIP; Stinp; Teap; SIP27; SIP18; 2700057G22Rik
Mus musculus	RefSeq	ILMN_194391	ILMN_194391	TRP53INP1	NM_021897.1	NM_021897.1		60599	11230805	NM_021897.1	Trp53inp1	NP_068697.1	ILMN_2971479	000060291	S	5108	GATTACTGTACACCAATCTATGCATAAATGGCAGCTTGTTTTCTTGAGCC	4	+	11101240-11101289	4qA1	Mus musculus transformation related protein 53 inducible nuclear protein 1 (Trp53inp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]		SIP; Stinp; Teap; SIP27; SIP18; 2700057G22Rik	SIP; Stinp; Teap; SIP27; SIP18; 2700057G22Rik
Mus musculus	RefSeq	ILMN_213354	ILMN_231109	CEACAM18	NM_028236.1	NM_028236.1		72431	58037298	NM_028236.1	Ceacam18	NP_082512.1	ILMN_1217029	003450113	S	1611	GGTAGAAAGGCTTCTCAATGAGGAAGGTAGTTGCCTTCTAATTATAGATG	7	+	50904338-50904387	7qB4	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 1 (Ceacam18), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2010110O04Rik	2010110O04Rik
Mus musculus	MEEBO	ILMN_214461	ILMN_214461	TILZ3C	scl0002938.1_342				11907579	AF201289	Tilz3c		ILMN_2648224	002690593	S	391	TGCGCGACCCCTGCTACCTGATCAATGAGGGCATCTGCAACCGCAACATA										
Mus musculus	RefSeq	ILMN_217242	ILMN_217242	SLC38A2	NM_175121.3	NM_175121.3		67760	31543734	NM_175121.3	Slc38a2	NP_780330.2	ILMN_2955671	000020066	S	4429	CATGGCTATCTGGTAACATGTCAAGTGTGATCTCAATGAAAGAGGACTCC	15	-	96517972-96518021	15qF1	Mus musculus solute carrier family 38, member 2 (Slc38a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IDA]	SAT2; 5033402L14Rik; AI316867; mKIAA1382; ATA2	SAT2; 5033402L14Rik; AI316867; mKIAA1382; ATA2
Mus musculus	RefSeq	ILMN_217242	ILMN_217242	SLC38A2	NM_175121.3	NM_175121.3		67760	31543734	NM_175121.3	Slc38a2	NP_780330.2	ILMN_2721692	003610519	S	4564	ACCGGTTTCAATGAAACAATGTATGTTTGTTTTAACTGAACTAAAATAAA	15	-	96517837-96517886	15qF1	Mus musculus solute carrier family 38, member 2 (Slc38a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IDA]	SAT2; 5033402L14Rik; AI316867; mKIAA1382; ATA2	SAT2; 5033402L14Rik; AI316867; mKIAA1382; ATA2
Mus musculus	RefSeq	ILMN_217242	ILMN_217242	SLC38A2	NM_175121.3	NM_175121.3		67760	31543734	NM_175121.3	Slc38a2	NP_780330.2	ILMN_1244123	004640008	S	618	GAGCAATGCGATTGTGGGCAGTGGAATCCTTGGGCTTTCTTATGCCATGG	15	-	96528377-96528426	15qF1	Mus musculus solute carrier family 38, member 2 (Slc38a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IDA]	SAT2; 5033402L14Rik; AI316867; mKIAA1382; ATA2	SAT2; 5033402L14Rik; AI316867; mKIAA1382; ATA2
Mus musculus	MEEBO	ILMN_187472	ILMN_187472	TRBV1_AE000663_T_CELL_RECEPTOR_BETA_VARIABLE_1_207	TRBV1_AE000663_T_cell_receptor_beta_variable_1_207						TRBV1_AE000663_T_cell_receptor_beta_variable_1_207		ILMN_2444432	005310228	S	19	GAGACGGTGCCCAGTCGTTTTATACCTGAATGCCCAGACAGCTCCAAGCT										
Mus musculus	RefSeq	ILMN_246565	ILMN_246565	PRDM14	NM_001081209.1	NM_001081209.1		383491	124487082	NM_001081209.1	Prdm14	NP_001074678.1	ILMN_3037312	001030392	I	1107	CATCCAGCGGAACCAGGAACTGCTTGTGTGGTACGGAAATGGCTATGAGA	1	-	13112513-13112562	1qA3	Mus musculus PR domain containing 14 (Prdm14), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223060	ILMN_223060	9330101J02RIK	scl0320625.2_27	XM_284369.2			38087535	XM_284369.2	9330101J02Rik		ILMN_2758782	006040372	S	3997	TGCCTTCAAATCAGACGGCCTCCTTGGACCAGTTTCGAAGTGTGAGACAG										
Mus musculus	RefSeq	ILMN_213486	ILMN_244763	5530401A14RIK	XM_484055.3	XM_484055.3		71388	94390239	XM_484055.3	5530401A14Rik	XP_484055.1	ILMN_2637516	005810215	S	1636	CCCACCAGCTAGTTCTTACCATTTAACAAGTACCAGTGTTTCGATGTGCT	11	+	81707882-81707931	11qB5	PREDICTED: Mus musculus RIKEN cDNA 5530401A14 gene (5530401A14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_243070	ILMN_243070	OLFR173	NM_147000.1	NM_147000.1		259002	22128938	NM_147000.1	Olfr173	NP_667211.1	ILMN_2986948	000780608	S	404	CGATGTCCAAGAAGCTCTGCCTTCAGATGACGACGGGAGCTTTCATAGCT	16	-	58797187-58797236	16qC1.2	Mus musculus olfactory receptor 173 (Olfr173), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR184-3	MOR184-3
Mus musculus	MEEBO	ILMN_191072	ILMN_191072	UBP1	scl36396.16_197				7305604	NM_013699	Ubp1		ILMN_2475864	006580079	S	8	GTCTCAGTGAAACTATACCTGGCCCATGGCACCAGCAGTCTGCTACTTTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	Riken	ILMN_205312	ILMN_205312	C430002D13RIK	ri|C430002D13|PX00078D01|AK049383|2064					AK049383	C430002D13Rik		ILMN_2571616	004390682	S	1933	GTCCTGGGTCCCTTCTGCAGGACTGGGTGAACTGGATGAAGTAGAGCCTG										
Mus musculus	RefSeq	ILMN_250511	ILMN_250511	RIMS1	NM_001012624.1	NM_001012624.1		116837	60592775	NM_001012624.1	Rims1	NP_001012642.1	ILMN_3082271	002070402	A	3612	GGAGGATAAGAAGGGTCAGTTGGAGGTTGAGGTTATCAGAGCCCGGAGCC				1qA5	Mus musculus regulating synaptic membrane exocytosis 1 (Rims1), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RIM1a; KIAA0340; Serg1; Rim; RIM1alpha; mKIAA0340; C030033M19Rik; Rab3ip1; RIM1	RIM1a; KIAA0340; Serg1; Rim; RIM1alpha; mKIAA0340; C030033M19Rik; Rab3ip1; RIM1
Mus musculus	RefSeq	ILMN_214786	ILMN_214786	SELE	NM_011345.2	NM_011345.2		20339	118130193	NM_011345.2	Sele	NP_035475.1	ILMN_1229155	004120333	S	2577	CAGTGGCTGCCGAAGTATTCTTGAACATTGTGTTCTGTGTCCTGGCACTG	1	+	165987473-165987522	1qH2.2	Mus musculus selectin, endothelial cell (Sele), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	E-selectin; CD62E; Elam	E-selectin; CD62E; Elam
Mus musculus	RefSeq	ILMN_188171	ILMN_188171	VEGFB	NM_011697.2	NM_011697.2		22340	142372406	NM_011697.2	Vegfb	NP_035827.1	ILMN_2450384	007550626	S	973	CTGGACCTTTTAGAGAGCTCTCTCGCCATCTTTTATCTCCCAGAGCTGCC	19	-	7057173-7057222	19qA	Mus musculus vascular endothelial growth factor B (Vegfb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	VEGF-B; Vrf	VEGF-B; Vrf
Mus musculus	MEEBO	ILMN_184540	ILMN_184540	TOP1	scl021969.20_26	NM_009408.1			6678398	NM_009408.1	Top1		ILMN_1215049	000620482	S	6	CCTTTAAGAGATCCATCTTTTCTTTGGAAACCCCAGTCTTTCATTTGAAA						The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IDA]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]	Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IDA]; Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IDA]; Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA [goid 3916] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212438	ILMN_245939	FCRLS	NM_030707.3	NM_030707.3		80891	148747157	NM_030707.3	Fcrls	NP_109632.2	ILMN_2770968	000940541	S	1865	GCGCAAGTGAGGATCACATACATGTGCCTGGGCTTCCATCTGGTAGAATG				3qF1	Mus musculus Fc receptor-like S, scavenger receptor (Fcrls), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IFGP2; IgSR; Fcrh2; MMAN-g; FcRH2sc; 9330158F12; moFcRH2sc; 2810439C17Rik	IFGP2; IgSR; Fcrh2; MMAN-g; FcRH2sc; 9330158F12; moFcRH2sc; 2810439C17Rik
Mus musculus	RefSeq	ILMN_220996	ILMN_220996	SVAL1	NM_027832.3	NM_027832.3		71578	146141089	NM_027832.3	Sval1	NP_082108.1	ILMN_1238794	005490056	S	492	GCACCAAACCACCTGAGGGAATACATAATCTTTTCTATCAATTTCTGTAG				6qB2.1	Mus musculus seminal vesicle antigen-like 1 (Sval1), mRNA.				9130404C18Rik; SLP-C; MGC140938	9130404C18Rik; SLP-C; MGC140938
Mus musculus	RefSeq	ILMN_224042	ILMN_232322	HEXA	NM_010421.4	NM_010421.4		15211	142374209	NM_010421.4	Hexa	NP_034551.2	ILMN_2773624	006370379	S	1624	CAGGAGTTTGAGCAGACTTGAGCCACCAGTGCTGAACACCCAGGAGGTTG	9	+	59412671-59412691:59412692-59412720	9qB	Mus musculus hexosaminidase A (Hexa), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of ganglioside, a ceramide oligosaccharide carrying, in addition to other sugar residues, one or more sialic residues [goid 6689] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IGI]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IDA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IMP]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IGI]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IDA]	Hex-1	Hex-1
Mus musculus	MEEBO	ILMN_187138	ILMN_187138	8430429K09RIK	scl071523.2_62						8430429K09Rik		ILMN_2441482	006130521	S	16	GTGACAGAGCTCTTCCGTAGCACTCCTGAAGTTCTGAGGCTCATCCTCTA										
Mus musculus	RefSeq	ILMN_213239	ILMN_213239	MOBKL2B	NM_178061.4	NM_178061.4		214944	118130339	NM_178061.4	Mobkl2b	NP_835162.1	ILMN_2900854	002710019	S	2290	CACAGAACTGTTTCTGACTGCTTGACTAAGAAGTACCCACACTTCCCGTG	4	-	34899995-34900044	4qA5	Mus musculus MOB1, Mps One Binder kinase activator-like 2B (yeast) (Mobkl2b), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	8430436F23Rik; MGC28259; Mob3b; A430018A01Rik	8430436F23Rik; MGC28259; Mob3b; A430018A01Rik
Mus musculus	MEEBO	ILMN_185078	ILMN_185078	PPP3CB	scl45850.12_4				45592929	NM_008914	Ppp3cb		ILMN_2705003	004730382	S	2931	CCCTTTACTTTGGTGGCCTGCTTCCCTCATGCCCTGGAGTACAGCTCATA							The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; Any process that stops, prevents, or reduces the rate of T cell mediated cytotoxicity [goid 1915] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]		
Mus musculus	RefSeq	ILMN_188141	ILMN_227597	BC038167	XM_904952.2	XM_904952.2		270150	94410781	XM_904952.2	BC038167	XP_910045.1	ILMN_1223757	002690110	S	1049	CCTGCAGAAACTAGATCCCATTCCCTTAAGCCTGGAGTACTTTTGGTCCC				9qA5.2	PREDICTED: Mus musculus cDNA sequence BC038167, transcript variant 5 (BC038167), mRNA.					
Mus musculus	RefSeq	ILMN_196799	ILMN_196799	LOC242607	XM_143982.1	XM_143982.1			20842339	XM_143982.1	LOC242607		ILMN_1235900	005560202	S	732	AAGCCTGCTTAGGTGCCACGAACCTTCACCAGTGACCCAGATGTTAGCAT										
Mus musculus	RefSeq	ILMN_216812	ILMN_216812	CD72	NM_007654.1	NM_007654.1		12517	6680889	NM_007654.1	Cd72	NP_031680.1	ILMN_2675669	005700528	S	1038	GCTTCACCCCTGCATTTGTGAGTCGGAGGCTTTCAGGTTTCCTGATGGGA	4	-	43461150-43461199	4qB1	Mus musculus CD72 antigen (Cd72), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Lyb-2; Ly-32; Ly-19; Ly-m19; CD72c	Lyb-2; Ly-32; Ly-19; Ly-m19; CD72c
Mus musculus	RefSeq	ILMN_223026	ILMN_223026	CYP2S1	NM_028775.3	NM_028775.3		74134	133892669	NM_028775.3	Cyp2s1	NP_083051.1	ILMN_2758264	006250180	S	2388	GTCATGTTATCAGGGGCCTGCTCTCAAACGCATTCTGATCTCTGAGCTGC	7	-	26587678-26587727	7qA3	Mus musculus cytochrome P450, family 2, subfamily s, polypeptide 1 (Cyp2s1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	C79779; AU041727; 1200011C15Rik	C79779; AU041727; 1200011C15Rik
Mus musculus	RefSeq	ILMN_212687	ILMN_212687	P2RX6	NM_011028.1	NM_011028.1		18440	6754965	NM_011028.1	P2rx6	NP_035158.1	ILMN_2706411	000110010	S	1405	GCTTGGGAAAATGGAGGACAAAGCTTCAGCGGGACTAGAGGGGAGTTGGG	16	+	17571279-17571328	16qA3	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 6 (P2rx6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence TAS]	P2xm; MGC141601	P2xm; MGC141601
Mus musculus	RefSeq	ILMN_212687	ILMN_212687	P2RX6	NM_011028.1	NM_011028.1		18440	6754965	NM_011028.1	P2rx6	NP_035158.1	ILMN_2706410	006840538	S	1403	GGCTTGGGAAAATGGAGGACAAAGCTTCAGCGGGACTAGAGGGGAGTTGG	16	+	17571277-17571326	16qA3	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 6 (P2rx6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence TAS]	P2xm; MGC141601	P2xm; MGC141601
Mus musculus	RefSeq	ILMN_200678	ILMN_249149	EG627371	XM_916872.3	XM_916872.3		627371	149255705	XM_916872.3	EG627371	XP_921965.3	ILMN_1238275	000940025	S	227	ACAGGCCTGGTACTGTGGCACACAGTGAAGTCAGATGCTATCCAAAGTCC				6qE2	PREDICTED: Mus musculus predicted gene, EG627371 (EG627371), mRNA.					
Mus musculus	RefSeq	ILMN_222094	ILMN_222094	SNX26	NM_178252.2	NM_178252.2		233071	40789296	NM_178252.2	Snx26	NP_839983.1	ILMN_1229159	004540487	S	4344	CCACCCACTAAAGCCACCTGACAACATTAAGGAATAAAAATGGCAGAAAT	7	-	31307247-31307296	7qB1	Mus musculus sorting nexin 26 (Snx26), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	AW324378; TCGAP	AW324378; TCGAP
Mus musculus	RefSeq	ILMN_200810	ILMN_200810	EG384596	XM_357735.1	XM_357735.1		384596	38086282	XM_357735.1	EG384596	XP_357735.1	ILMN_1230032	005910575	S	386	GCTTGGCTCCTAATTATGATGTTCTAGATGTTGCCAACAAGATTAGGGTC	7	+	33407663-33407712	7qB1	PREDICTED: Mus musculus predicted gene, EG384596 (EG384596), mRNA.					
Mus musculus	RefSeq	ILMN_254551	ILMN_254551	OLFR304	NM_001011828.1	NM_001011828.1		258089	58801419	NM_001011828.1	Olfr304	NP_001011828.1	ILMN_3162002	002370725	S	355	GACCGCTATGTTGCCATTTGCTCTCCTCTGTGTTATGAGGCAATCATGAG	7	-	93534764-93534813	7qD3	Mus musculus olfactory receptor 304 (Olfr304), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR219-3P	MOR219-3P
Mus musculus	MEEBO	ILMN_189363	ILMN_189363	KCNJ3	scl20911.3_1				6680531	NM_008426	Kcnj3		ILMN_2460611	000380097	S	7	TTATGTCCTGGTTTGGATGATATATGGTAAAGTTTTGTTGACACTAACAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 15467] [evidence TAS];  [goid 5242] [evidence IEA]		
Mus musculus	RefSeq	ILMN_204196	ILMN_201597	PIK3R4	XM_135116.7	XM_135116.7		75669	94386552	XM_135116.7	Pik3r4	XP_135116.5	ILMN_1244060	001170411	S	4359	CAGCATCGTAAACAGAAGTCTCTTAGTGTTGTTCGCAGTGAGCCTCCGTC	9	+	105536850-105536899	9qF1	PREDICTED: Mus musculus phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150, transcript variant 1 (Pik3r4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_206094	ILMN_201597	PIK3R4	XM_135116.7	XM_135116.7		75669	94386552	XM_135116.7	Pik3r4	XP_135116.5	ILMN_1215277	001410674	S	4875	ATTTTGAACATACACACACCTCCCTTCTCCCTGTCCACTCCCAACAACCC	9	+	105537366-105537415	9qF1	PREDICTED: Mus musculus phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150, transcript variant 1 (Pik3r4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188208	ILMN_188208	AW555814	scl16440.30_290				34328376	NM_173760	AW555814		ILMN_2450712	002360364	S	8	GAAATAGAAAATCCCCAGCAGCATTTTACATTAAGTACTATTCAATAAAA										
Mus musculus	RefSeq	ILMN_210325	ILMN_246024	DNAHC10	XM_915600.3	XM_915600.3		56087	149254378	XM_915600.3	Dnahc10	XP_920693.3	ILMN_2604447	003060601	S	6014	TCAACCGGATCGATGCCTCCGTGCTGTCTGTCATCTCGTCTCAGATCCAG				5qF	PREDICTED: Mus musculus dynein, axonemal, heavy chain 10 (Dnahc10), mRNA.	A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence TAS]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence TAS]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence TAS]		
Mus musculus	Riken	ILMN_203003	ILMN_203003	5930431L16RIK	ri|5930431L16|PX00055H08|AK031223|2227					AK031223	5930431L16Rik		ILMN_2553990	006590408	S	1736	GCAAGTTAGTCATAACGACCTCCTGGGAGAAAGGCATGATTGCAAGGTGG										
Mus musculus	Riken	ILMN_202122	ILMN_202122	1200003E11RIK	ri|2810474N19|ZX00067J05|AK013407|842					AK013407	1200003E11Rik		ILMN_1236653	003450292	S	414	TAAGAGTCCCAACTTGTCCAAACATAGGAATTCCAGGCAGGAAATGTGGG										
Mus musculus	RefSeq	ILMN_208640	ILMN_208640	D130059P03RIK	NM_177185.3	NM_177185.3		320538	31560745	NM_177185.3	D130059P03Rik	NP_796159.2	ILMN_2709787	006980546	S	4113	ACGATGGAGGCCAAAGTAAAGGGGACACTAAGTTACCACGGAAACCTCAG	6	+	38449271-38449276:38452238-38452281	6qB1	Mus musculus RIKEN cDNA D130059P03 gene (D130059P03Rik), mRNA.				6030408G03Rik; BC060116; 2900060J04Rik; mKIAA2030	6030408G03Rik; BC060116; 2900060J04Rik; mKIAA2030
Mus musculus	RefSeq	ILMN_197291	ILMN_197291	LOC241572	XM_141269.3	XM_141269.3			38075008	XM_141269.3	LOC241572		ILMN_1236064	006480327	S	1258	GCAACATTACCAGCGACCCCACAGAAGCTGCCACTGTGGACTGCTTGCCA										
Mus musculus	RefSeq	ILMN_200545	ILMN_200545	LOC383319	XM_356981.1	XM_356981.1			38083561	XM_356981.1	LOC383319		ILMN_1256469	006760601	S	345	GTCAGATCCACAACGGATATACAGGAACACAGAAGGCCATGATAGTGAGC										
Mus musculus	Riken	ILMN_206424	ILMN_206424	DPP6	ri|C230021C10|PX00174O21|AK082186|2507					AK082186	Dpp6		ILMN_1251897	001050121	S	2382	GCACCCCCAAGGTGGTTCTCAGCTGTCTATAACTCTAGTCCCAGGGGATC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197968	ILMN_324255	LOC635992	XM_001480808.1	XM_001480808.1		635992	149268086	XM_001480808.1	LOC635992	XP_001480858.1	ILMN_1243471	000070156	S	30	GACGGTCTCCACAGGAGTTCCTCATAATTTTCGCTTGTTGGAAGAACTTG	16	+	19017010-19017059		PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme E2 variant 2 (LOC635992), mRNA.					
Mus musculus	Riken	ILMN_207434	ILMN_207434	5330403O16RIK	ri|5330403O16|PX00642L22|AK077305|1936					AK077305	5330403O16Rik		ILMN_1241724	002490477	S	1567	TTCCTGGAGGAGACGCATGTCTGCTAGCTCAACCCCATCTCAGGGCCATG										
Mus musculus	RefSeq	ILMN_199164	ILMN_199164	LOC327986	XM_282988.2	XM_282988.2			38091537	XM_282988.2	LOC327986		ILMN_1250289	005360053	S	342	CTCGAGGCTCTGGGAAAGAACACTGGCTTGGGAAGATTCTGTGACCTCTC										
Mus musculus	Riken	ILMN_205865	ILMN_205865	B930096H04RIK	ri|B930096H04|PX00166D14|AK047594|2225					AK047594	B930096H04Rik		ILMN_2575800	004610379	S	1124	GTCCGTGGCTCTGCAGAGAGAAGGCATCGATTCCCAGTCTTTAATTGAAT										
Mus musculus	RefSeq	ILMN_217564	ILMN_217564	OLFR550	NM_147104.1	NM_147104.1		259108	22128764	NM_147104.1	Olfr550	NP_667315.1	ILMN_2684838	003870131	S	760	TTGCCCAAGTTGGGGCTGTCCGTGCTGCACCGAGTGGAGAAACACAGCTA	7	+	109727770-109727819	7qE3	Mus musculus olfactory receptor 550 (Olfr550), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR16-1	MOR16-1
Mus musculus	RefSeq	ILMN_218539	ILMN_218539	DCP1A	NM_133761.3	NM_133761.3		75901	133778957	NM_133761.3	Dcp1a	NP_598522.3	ILMN_2697060	006900086	S	5386	CAGCCCTTCCGGGGAGGCAAGAAGCCCCGCGCCACCTCGAGCGAAGCTTT	14	+	31340012-31340061	14qB	Mus musculus DCP1 decapping enzyme homolog A (S. cerevisiae) (Dcp1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]	1110066A22Rik; D14Ertd817e; Mitc1; 4930568L04Rik; AU019772; SMIF	1110066A22Rik; D14Ertd817e; Mitc1; 4930568L04Rik; AU019772; SMIF
Mus musculus	RefSeq	ILMN_218539	ILMN_218539	DCP1A	NM_133761.3	NM_133761.3		75901	133778957	NM_133761.3	Dcp1a	NP_598522.3	ILMN_2719111	007320187	S	1721	AGAGAAAGCCTTCCATTATCCTCAGCAAGTCTCAGCTCCAGGACACACTG	14	+	31336068-31336117	14qB	Mus musculus DCP1 decapping enzyme homolog A (S. cerevisiae) (Dcp1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]	1110066A22Rik; D14Ertd817e; Mitc1; 4930568L04Rik; AU019772; SMIF	1110066A22Rik; D14Ertd817e; Mitc1; 4930568L04Rik; AU019772; SMIF
Mus musculus	RefSeq	ILMN_212749	ILMN_212749	RRP15	NM_026041.2	NM_026041.2		67223	126362984	NM_026041.2	Rrp15	NP_080317.3	ILMN_2629856	002320706	S	949	CTGCGCATGGCCATCTGCCAAATGCTAGGACTTCCTGAGAACCTGTGCTC	1	-	188545179-188545228	1qH5	Mus musculus ribosomal RNA processing 15 homolog (S. cerevisiae) (Rrp15), mRNA.				5430437H21Rik; 2810430M08Rik	5430437H21Rik; 2810430M08Rik
Mus musculus	MEEBO	ILMN_186537	ILMN_186537	2010004M13RIK	scl33062.1.1_320						2010004M13Rik		ILMN_2436369	002140215	S	10	CATGCCCTTGTTTCTCCCGAGCTATAGAAAACCTGGTGCACAACAGTAGG										
Mus musculus	RefSeq	ILMN_217342	ILMN_217342	OLFR1118	NM_207632.2	NM_207632.2		404328	148229647	NM_207632.2	Olfr1118	NP_997515.2	ILMN_2682109	000650754	S	811	GGGAAGCTGCTATCTCTTTTCTACACCATTTTGATCCCAGCTTTGAATCC				2qD	Mus musculus olfactory receptor 1118 (Olfr1118), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR264-22	MOR264-22
Mus musculus	RefSeq	ILMN_199682	ILMN_199682	LOC382881	XM_356727.1	XM_356727.1			38075976	XM_356727.1	LOC382881		ILMN_2536102	003310703	S	579	ACAGCCAGAGTGTTCCCATTCCACAGTGTCTGCTGGGAAAAAATCATCCC										
Mus musculus	RefSeq	ILMN_216536	ILMN_216536	ID1	NM_010495.2	NM_010495.2		15901	118130032	NM_010495.2	Id1	NP_034625.1	ILMN_2672190	006200692	S	624	GACTCTTGGCGGATCGGTCCAGTGGGTAGAGGGTTTGATCAACAGAGCCT	2	+	152562859-152562908	2qH1	Mus musculus inhibitor of DNA binding 1 (Id1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Idb1; D2Wsu140e; AI323524	Idb1; D2Wsu140e; AI323524
Mus musculus	RefSeq	ILMN_193227	ILMN_312939	SLC43A1	NM_001083809.1	NM_001083809.1		72401	139948178	NM_001083809.1	Slc43a1	NP_001077278.1	ILMN_2495194	005390524	S	1884	CACAGAAGGTGCTCAATACTTCGAAGGTGGCTACATAGACTCCTGAGGCC	2	+	84703149-84703186:84703187-84703198	2qD	Mus musculus solute carrier family 43, member 1 (Slc43a1), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]	Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]	Lat3; PB39; 2610016F07Rik; AA986141; Pov1; R00504	Lat3; PB39; 2610016F07Rik; AA986141; Pov1; R00504
Mus musculus	RefSeq	ILMN_193227	ILMN_312939	SLC43A1	NM_001083809.1	NM_001083809.1		72401	139948178	NM_001083809.1	Slc43a1	NP_001077278.1	ILMN_1229667	000520221	S	1676	CTGACAGGTCTTCAGTCTCTCATCAGTGCCGTGTTTGCTCTGCTGCAACA	2	+	84701558-84701607	2qD	Mus musculus solute carrier family 43, member 1 (Slc43a1), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]	Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]	Lat3; PB39; 2610016F07Rik; AA986141; Pov1; R00504	Lat3; PB39; 2610016F07Rik; AA986141; Pov1; R00504
Mus musculus	RefSeq	ILMN_191180	ILMN_220558	RCN3	NM_026555.1	NM_026555.1		52377	30794451	NM_026555.1	Rcn3	NP_080831.1	ILMN_1246312	000460253	S	245	TCATGGTCGTACTGGAAATTCCCGTGGGCGTCATCGTGGGGGGCCTCGCT	7	-	52346832-52346881	7qB4	Mus musculus reticulocalbin 3, EF-hand calcium binding domain (Rcn3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RLP49; 6030455P07Rik; MGC102610; D530026G20Rik; D7Ertd671e	RLP49; 6030455P07Rik; MGC102610; D530026G20Rik; D7Ertd671e
Mus musculus	RefSeq	ILMN_220558	ILMN_220558	RCN3	NM_026555.1	NM_026555.1		52377	30794451	NM_026555.1	Rcn3	NP_080831.1	ILMN_2723718	004280064	S	1068	ATGTCTCTCAGACTTCCGACCACATGACCACATGGGGGACAACCGCGGGG	7	-	52338569-52338618	7qB4	Mus musculus reticulocalbin 3, EF-hand calcium binding domain (Rcn3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RLP49; 6030455P07Rik; MGC102610; D530026G20Rik; D7Ertd671e	RLP49; 6030455P07Rik; MGC102610; D530026G20Rik; D7Ertd671e
Mus musculus	RefSeq	ILMN_223555	ILMN_223555	C230095G01RIK	NM_178768.3	NM_178768.3		319776	32129221	NM_178768.3	C230095G01Rik	NP_848883.2	ILMN_2991960	006450474	S	2995	CCACACACTGAAAATGAGGCCGAGTGGGGAGGGCAATCGTGACATGAGGC	6	-	116658634-116658683	6qE3	Mus musculus RIKEN cDNA C230095G01 gene (C230095G01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201198	ILMN_201198	LOC382070	XM_356149.1	XM_356149.1			38089766	XM_356149.1	LOC382070		ILMN_1238348	006940639	S	582	GTCACACAGTGGCCAGAAAGGCTTGGCATCGGAAGTAAACTGTAGGGTAG										
Mus musculus	RefSeq	ILMN_211855	ILMN_211855	PLCD3	NM_152813.2	NM_152813.2		72469	89363031	NM_152813.2	Plcd3	NP_690026.1	ILMN_2620145	001240039	S	2555	TGTGCACACCTGGGTGCTAGGAGCTGTTTGGTTGCTCAGTGAGAGAGAGG	11	-	102931980-102932029	11qE1	Mus musculus phospholipase C, delta 3 (Plcd3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]	mKIAA1964; 2610205J15Rik	mKIAA1964; 2610205J15Rik
Mus musculus	RefSeq	ILMN_210864	ILMN_254832	EG665369	XM_912043.2	XM_912043.2		665369	94407173	XM_912043.2	EG665369	XP_917136.2	ILMN_1236624	003420689	S	972	GCATTCCTATGCCCACATAAAGGCATGCCTCTATATATTGGCTATTACAG				XqA3.3	PREDICTED: Mus musculus predicted gene, EG665369 (EG665369), mRNA.					
Mus musculus	RefSeq	ILMN_249540	ILMN_249540	2500003M10RIK	NM_023215.3	NM_023215.3		66511	32129271	NM_023215.3	2500003M10Rik	NP_075704.2	ILMN_2858173	007610594	S	3089	GGCTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAACTGGC	3	-	90584993-90585042	3qF1	Mus musculus RIKEN cDNA 2500003M10 gene (2500003M10Rik), mRNA.				C81330	C81330
Mus musculus	RefSeq	ILMN_184765	ILMN_244830	PMCH	NM_029971.2	NM_029971.2		110312	126215534	NM_029971.2	Pmch	NP_084247.1	ILMN_2421388	006590750	S	695	TAATGTAAGCGATATGCTTGACGTGTGCATTAAACCTCACAAAAGTTCTG	10	+	87555066-87555115	10qC1	Mus musculus pro-melanin-concentrating hormone (Pmch), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IC ]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA];  [goid 30354] [evidence NAS]	MCH; A230109K23Rik	MCH; A230109K23Rik
Mus musculus	RefSeq	ILMN_244830	ILMN_244830	PMCH	NM_029971.2	NM_029971.2		110312	126215534	NM_029971.2	Pmch	NP_084247.1	ILMN_2955329	007210661	S	235	CCGTTGTCGCCCCTTCTCTGGAACAATACAAAAACGACGAGAGCGGTTTC	10	+	87554051-87554100	10qC1	Mus musculus pro-melanin-concentrating hormone (Pmch), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IC ]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA];  [goid 30354] [evidence NAS]	MCH; A230109K23Rik	MCH; A230109K23Rik
Mus musculus	RefSeq	ILMN_212614	ILMN_212614	HBP1	NM_177993.1	NM_177993.1		73389	29568078	NM_177993.1	Hbp1	NP_818774.1	ILMN_1230323	006550026	S	2436	GGCCAGTTGGCATATACATTAATGAGGTTGAAACTTAAGCGAGGAAGGAG	12	-	32614495-32614544	12qA3	Mus musculus high mobility group box transcription factor 1 (Hbp1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700058O05Rik; BE629963; C86454; C330012F01Rik	1700058O05Rik; BE629963; C86454; C330012F01Rik
Mus musculus	Riken	ILMN_207313	ILMN_207313	4921519B16RIK	ri|4921519B16|PX00638N06|AK076576|2006					AK076576	4921519B16Rik		ILMN_1217752	001190326	S	1752	TCCCGCTGATAACCCCACACCCAGCACCTACTTCAAGGCAGGCATGAGAT										
Mus musculus	MEEBO	ILMN_216792	ILMN_216792	KLRB1B	scl0017058.1_329				6678743	NM_008526	Klrb1b		ILMN_2675422	002030291	S	1456	TTTGCCAAACTTTCCATGAAAATAAAAGGAGTATGAATATTGAATTTACT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity [goid 45953] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221429	ILMN_234821	LRP2	NM_001081088.1	NM_001081088.1		14725	124487371	NM_001081088.1	Lrp2	NP_001074557.1	ILMN_2735522	005690367	S	15167	CGGCTCTTCTGAGCAGTTGCTGAATTCTCTATCACAGGAACCATGGCACG	2	-	69262642-69262691	2qC2	Mus musculus low density lipoprotein receptor-related protein 2 (Lrp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The chemical reactions and pathways involving vitamins. Vitamin is a general term for a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body. Vitamins may be water-soluble or fat-soluble and usually serve as components of coenzyme systems [goid 6766] [evidence IMP]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]	D230004K18Rik; AI315343; Megalin; Gp330; AW536255	D230004K18Rik; AI315343; Megalin; Gp330; AW536255
Mus musculus	RefSeq	ILMN_203313	ILMN_234821	LRP2	NM_001081088.1	NM_001081088.1		14725	124487371	NM_001081088.1	Lrp2	NP_001074557.1	ILMN_1233247	004920735	S	342	GTCATCCAAACAGTCTCTGGTCCCATCACACCTCCAGGATGCAGGGATAC	2	-	69388979-69389009:69390410-69390428	2qC2	Mus musculus low density lipoprotein receptor-related protein 2 (Lrp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The chemical reactions and pathways involving vitamins. Vitamin is a general term for a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body. Vitamins may be water-soluble or fat-soluble and usually serve as components of coenzyme systems [goid 6766] [evidence IMP]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]	D230004K18Rik; AI315343; Megalin; Gp330; AW536255	D230004K18Rik; AI315343; Megalin; Gp330; AW536255
Mus musculus	RefSeq	ILMN_234821	ILMN_234821	LRP2	NM_001081088.1	NM_001081088.1		14725	124487371	NM_001081088.1	Lrp2	NP_001074557.1	ILMN_3117209	005690750	A	1230	GATATGGGGAATTTGTGACCAGAAGTGTGAGAGCCGACAGGGCCGTCACC	2	-	69365635-69365684	2qC2	Mus musculus low density lipoprotein receptor-related protein 2 (Lrp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The chemical reactions and pathways involving vitamins. Vitamin is a general term for a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body. Vitamins may be water-soluble or fat-soluble and usually serve as components of coenzyme systems [goid 6766] [evidence IMP]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]	D230004K18Rik; AI315343; Megalin; Gp330; AW536255	D230004K18Rik; AI315343; Megalin; Gp330; AW536255
Mus musculus	RefSeq	ILMN_198392	ILMN_198392	GM550	XM_148894.7	XM_148894.7		225852	94405710	XM_148894.7	Gm550	XP_148894.2	ILMN_1235542	004640154	S	691	CTTGAGCAACCGAAGAGGGCTTCTGGCCTGCACTACTCCTTTGACACTCC	19	+	6098080-6098084:6098085-6098129	19qA	PREDICTED: Mus musculus gene model 550, (NCBI) (Gm550), mRNA.					
Mus musculus	RefSeq	ILMN_186038	ILMN_254955	5730508B09RIK	NM_027482.2	NM_027482.2		70617	142364568	NM_027482.2	5730508B09Rik	NP_081758.1	ILMN_2621217	004260139	S	495	GTACAGCAGTAAAACACCAGACATTTGATAGCCATGTATGTAACTGATAT	3	-	127573631-127573672:127573673-127573680	3qG2	Mus musculus RIKEN cDNA 5730508B09 gene (5730508B09Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC151168; 2700063A17Rik; C80506; MGC151170	MGC151168; 2700063A17Rik; C80506; MGC151170
Mus musculus	RefSeq	ILMN_190017	ILMN_261516	1500004F05RIK	XM_988852.1	XM_988852.1		69765	94383360	XM_988852.1	1500004F05Rik	XP_993946.1	ILMN_2466453	005560315	S	985	CTCTGATGCTCCGAGCGCTTTGTGGTTGCGTGCAGACCGTTGCTTCAATC					PREDICTED: Mus musculus RIKEN cDNA 1500004F05 gene (1500004F05Rik), mRNA.					
Mus musculus	Riken	ILMN_203211	ILMN_203211	PPP1R1C	ri|B230207N09|PX00069I17|AK045507|1946					AK045507	Ppp1r1c		ILMN_2555562	002140292	S	1728	CCCAGTGCAACAAATGGGTAAAGCCTACGCAAGCAAGCAAGCAAGCAAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222140	ILMN_222140	DHRS7B	NM_145428.1	NM_145428.1		216820	21703853	NM_145428.1	Dhrs7b	NP_663403.1	ILMN_1255146	001090639	S	914	CCATGGCTGTCTACATCAGAACTCTGGCTCCCGGGCTCTTCTTCAGAATC	11	+	60671343-60671392	11qB2	Mus musculus dehydrogenase/reductase (SDR family) member 7B (Dhrs7b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC6908; C80074; BC003479; C79874	MGC6908; C80074; BC003479; C79874
Mus musculus	RefSeq	ILMN_222140	ILMN_222140	DHRS7B	NM_145428.1	NM_145428.1		216820	21703853	NM_145428.1	Dhrs7b	NP_663403.1	ILMN_3114114	002100465	A	1087	GATCCGCCGCTAAGACCTGGTGGAGGGCTACCTTGTATTTGTTTCCCAGG	11	+	60671516-60671565	11qB2	Mus musculus dehydrogenase/reductase (SDR family) member 7B (Dhrs7b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC6908; C80074; BC003479; C79874	MGC6908; C80074; BC003479; C79874
Mus musculus	RefSeq	ILMN_222140	ILMN_222140	DHRS7B	NM_145428.1	NM_145428.1		216820	21703853	NM_145428.1	Dhrs7b	NP_663403.1	ILMN_3039637	005340100	I	592	CACATCGTCGCCATCAGCAGCATCCAGGGCAAGATCAGCATTCCTTTCCG	11	+	60665968-60666013:60669202-60669205	11qB2	Mus musculus dehydrogenase/reductase (SDR family) member 7B (Dhrs7b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC6908; C80074; BC003479; C79874	MGC6908; C80074; BC003479; C79874
Mus musculus	RefSeq	ILMN_209802	ILMN_253978	BC021785	NM_001001489.2	NM_001001489.2		215928	141802987	NM_001001489.2	BC021785	NP_001001489.1	ILMN_2599348	002100296	S	459	CCGGTCTTTACCTCACTCCTTTCTGTAAAACAGCGGCCTTACTGACTACC	10	-	39693440-39693489	10qB1	Mus musculus cDNA sequence BC021785 (BC021785), mRNA.		The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209606	ILMN_209606	1700045I19RIK	NM_028842.1	NM_028842.1		74264	13386355	NM_028842.1	1700045I19Rik	NP_083118.1	ILMN_2967255	005270017	S	909	CGTTTCAGTCACTTGCCCAATTTGCCTATCTCTTCCATGGGGCGACCCGC	X	-	159104476-159104525	XqF5	Mus musculus RIKEN cDNA 1700045I19 gene (1700045I19Rik), mRNA.				AI853461	AI853461
Mus musculus	RefSeq	ILMN_221529	ILMN_241376	LOC674110	XM_975252.2	XM_975252.2		674110	149263787	XM_975252.2	LOC674110	XP_980346.2	ILMN_2736810	001240347	S	228	CACCTACTATCCAGACAGTGTGAAGGGGCGATTCACCATCTCCAGAGACA	12|NT_114985.2	+	844371-844420		PREDICTED: Mus musculus similar to monoclonal anti-alpha-1,3-galactosyltransferase IgM heavy chain (LOC674110), mRNA.					
Mus musculus	RefSeq	ILMN_208807	ILMN_208807	MS4A6D	NM_026835.2	NM_026835.2		68774	119637843	NM_026835.2	Ms4a6d	NP_081111.1	ILMN_2602352	002190475	S	608	CACAACTAGACACAACCCAAGATGCTTATCATTTCTTTAGCCCTGAGCCA	19	-	11664515-11664564	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 6D (Ms4a6d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1110058E16Rik; Ms4a11; AI447446	1110058E16Rik; Ms4a11; AI447446
Mus musculus	RefSeq	ILMN_208807	ILMN_208807	MS4A6D	NM_026835.2	NM_026835.2		68774	119637843	NM_026835.2	Ms4a6d	NP_081111.1	ILMN_1241695	003180025	S	1033	CTGGCTGGGTTCAGTAGCACGCTCTTGATTTGGCGTCAGTCAAAACACAG	19	-	11661384-11661433	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 6D (Ms4a6d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1110058E16Rik; Ms4a11; AI447446	1110058E16Rik; Ms4a11; AI447446
Mus musculus	RefSeq	ILMN_216239	ILMN_216239	CFD	NM_013459.1	NM_013459.1		11537	7304866	NM_013459.1	Cfd	NP_038487.1	ILMN_2835423	003360608	S	667	CAGTCGAAGGTGTGGTTACGTGGGGCTCTCGCGTCTGTGGCAATGGCAAA	10	+	79355204-79355253	10qC1	Mus musculus complement factor D (adipsin) (Cfd), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Adn; DF; factor D	Adn; DF; factor D
Mus musculus	RefSeq	ILMN_223585	ILMN_235726	2610008E11RIK	NM_001004362.1	NM_001004362.1		72128	52138541	NM_001004362.1	2610008E11Rik	NP_001004362.2	ILMN_2766096	005220608	S	3833	ACTCAACAGTGATAATCATGTCATGTTGACAAGGAGTACAGTTATGGTGG	10	-	78527422-78527471	10qC1	Mus musculus RIKEN cDNA 2610008E11 gene (2610008E11Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC90797	MGC90797
Mus musculus	RefSeq	ILMN_201292	ILMN_235726	2610008E11RIK	NM_001004362.1	NM_001004362.1		72128	52138541	NM_001004362.1	2610008E11Rik	NP_001004362.2	ILMN_1240963	000430377	S	601	CACCAGGAATCAGACATCTCAGTCATATGAGAACCCCTTTGGATGGGAGG	10	-	78530654-78530703	10qC1	Mus musculus RIKEN cDNA 2610008E11 gene (2610008E11Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC90797	MGC90797
Mus musculus	RefSeq	ILMN_186040	ILMN_248392	MFHAS1	NM_001081279.1	NM_001081279.1		52065	124486880	NM_001081279.1	Mfhas1	NP_001074748.1	ILMN_2432103	006100279	S	5453	CCCCTTCCTTTGTAGACCACTGAATTATTGGGCAATAGTTTATTTTGTTG	8	+	36741548-36741597	8qA4	Mus musculus malignant fibrous histiocytoma amplified sequence 1 (Mfhas1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D8Ertd91e; 2310066G09Rik	D8Ertd91e; 2310066G09Rik
Mus musculus	RefSeq	ILMN_186040	ILMN_248392	MFHAS1	NM_001081279.1	NM_001081279.1		52065	124486880	NM_001081279.1	Mfhas1	NP_001074748.1	ILMN_1247765	003780070	S	3521	GTGCCTTAAGAGAGGGTCGCCAAATCCACACGCTTTCCCAGGGGAGTTGC	8	+	36654372-36654412:36727722-36727730	8qA4	Mus musculus malignant fibrous histiocytoma amplified sequence 1 (Mfhas1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D8Ertd91e; 2310066G09Rik	D8Ertd91e; 2310066G09Rik
Mus musculus	RefSeq	ILMN_213524	ILMN_213524	OLFR1054	NM_147019.1	NM_147019.1		259021	22128900	NM_147019.1	Olfr1054	NP_667230.1	ILMN_2637912	007000332	S	628	CTCGTGGTACTCCTCTTTTCTTATCTACTCATTCTTATAGCCATTTTTAG	2	-	86172834-86172883	2qD	Mus musculus olfactory receptor 1054 (Olfr1054), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR188-2	MOR188-2
Mus musculus	RefSeq	ILMN_219138	ILMN_219138	DEPDC6	NM_145470.2	NM_145470.2		97998	83921620	NM_145470.2	Depdc6	NP_663445.2	ILMN_3163001	001070243	A	1432	GGGCTTGGTGGCTCAAGTCTATAATCCCAGCATTCAGGAGGGCAAGGCAG	15	+	55083877-55083926	15qD1	Mus musculus DEP domain containing 6 (Depdc6), transcript variant 1, mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA4200; D15Ertd336e; mKIAA4200; 4731402B04Rik; D15Ertd597e; R75183; 9130412E02Rik	KIAA4200; D15Ertd336e; mKIAA4200; 4731402B04Rik; D15Ertd597e; R75183; 9130412E02Rik
Mus musculus	RefSeq	ILMN_209622	ILMN_244459	GLYCTK	NM_001039586.1	NM_001039586.1		235582	88759351	NM_001039586.1	Glyctk	NP_001034675.1	ILMN_1218287	000940082	S	3476	GGGCCCCATTATAGCAAACAGTTTGTGGGCATAACCTTCTATATTTGCTC	9	-	106055755-106055804	9qF1	Mus musculus glycerate kinase (Glyctk), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + (R)-glycerate = ADP + 3-phospho-(R)-glycerate [goid 8887] [evidence IEA]	C430006L12	C430006L12
Mus musculus	RefSeq	ILMN_201057	ILMN_201057	LOC384737	XM_357832.1	XM_357832.1			38088345	XM_357832.1	LOC384737		ILMN_1224656	000430537	S	256	GAGCTCGGAGAAGACTCTGCTTTTGTTACTGTCGTCAACCTCCCCGTTTG										
Mus musculus	Riken	ILMN_202470	ILMN_202470	AP3M2	ri|5830445E16|PX00039L19|AK017991|1339					AK017991	Ap3m2		ILMN_1242870	007100025	S	1169	ACTGCTGTTGGAACCTCACTCCTAGCACAGCGGATGGAAGGTGGTCCAGG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198136	ILMN_198136	LOC381078	XM_354999.1	XM_354999.1			38082104	XM_354999.1	LOC381078		ILMN_2530615	000830468	S	1832	GGTGGTGTTCTTCGGTCCTGCGCTGTGGACCTGGGGGAGTACTGTTCACT										
Mus musculus	RefSeq	ILMN_190747	ILMN_190747	WNT5A	NM_009524.2	NM_009524.2		22418	46909566	NM_009524.2	Wnt5a	NP_033550.2	ILMN_2511913	001410300	S	3855	CCATTCATGGGCTTGGTAGCCTTCTGGTCACCTCAGTCCTGTGGCTCTTA	14	+	29338202-29338251	14qA3	Mus musculus wingless-related MMTV integration site 5A (Wnt5a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	8030457G12Rik; Wnt-5a	8030457G12Rik; Wnt-5a
Mus musculus	RefSeq	ILMN_190747	ILMN_190747	WNT5A	NM_009524.2	NM_009524.2		22418	46909566	NM_009524.2	Wnt5a	NP_033550.2	ILMN_2472917	007400706	S	1691	CCGAACGCTGTCATTGCAAGTTTCACTGGTGCTGCTATGTCAAATGCAAG	14	+	29336038-29336087	14qA3	Mus musculus wingless-related MMTV integration site 5A (Wnt5a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	8030457G12Rik; Wnt-5a	8030457G12Rik; Wnt-5a
Mus musculus	MEEBO	ILMN_189088	ILMN_189088	4930488B01RIK	scl33036.2.115_8						4930488B01Rik		ILMN_1219014	004490731	S	2	GAAGGGTCGGAAGGTGTGGAAGGGATTGGATCCCCTGCATGTCCTGTAAC										
Mus musculus	RefSeq	ILMN_216262	ILMN_216262	AKT1S1	NM_026270.3	NM_026270.3		67605	146135063	NM_026270.3	Akt1s1	NP_080546.1	ILMN_1214358	004860088	S	1414	ACAGTACCAGCTTCCTGTCCCCCGACCCTAACAGGTGCCTTAAAAGGCCC				7qB4	Mus musculus AKT1 substrate 1 (proline-rich) (Akt1s1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any constituent part of cytosol, that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 44445] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45884] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence ISA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lobel; PRAS40; AI227026; Lobe; 1110012J22Rik	Lobel; PRAS40; AI227026; Lobe; 1110012J22Rik
Mus musculus	RefSeq	ILMN_200950	ILMN_200950	LOC385509	XM_358261.1	XM_358261.1			38087290	XM_358261.1	LOC385509		ILMN_2540579	006420370	S	342	CAAGGCCAGCAAACGCAAAACTCCAGTGGTGAAGAAGAGCTTGAACCCCC										
Mus musculus	RefSeq	ILMN_215869	ILMN_215869	JPH1	NM_020604.1	NM_020604.1		57339	10181139	NM_020604.1	Jph1	NP_065629.1	ILMN_1217728	006130451	S	2107	CCATCATGATTGTCCTGGTCATGCTGTTGAATATTGGGTTGGCCATTCTT	1	-	16987580-16987629	1qA3	Mus musculus junctophilin 1 (Jph1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence IMP]	ENSMUSG00000054314; JP-1; Jp1	ENSMUSG00000054314; JP-1; Jp1
Mus musculus	RefSeq	ILMN_212227	ILMN_212227	PDGFRA	NM_011058.2	NM_011058.2		18595	134032049	NM_011058.2	Pdgfra	NP_035188.2	ILMN_1235932	005290521	S	6410	GTGGTAAGTGTGTGAGAGCGACTTACTCCATAGGAAGGGTCTTCCAATAC	5	+	75594086-75594135	5qC3.3	Mus musculus platelet derived growth factor receptor, alpha polypeptide (Pdgfra), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]	Interacting selectively with platelet-derived growth factor [goid 48407] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI115593; CD140a; Pdgfr-2	AI115593; CD140a; Pdgfr-2
Mus musculus	RefSeq	ILMN_200815	ILMN_311178	LOC666559	XR_031145.1	XR_031145.1		666559	149271646	XR_031145.1	LOC666559		ILMN_2540103	002060382	S	564	TCCTATCAGACTGAGATCGGCAGACTCTAGACCTCATGACAGCACCCCGG	X	-	57980085-57980134	XqA6	PREDICTED: Mus musculus similar to farnesyl pyrophosphate synthase (LOC666559), misc RNA.					
Mus musculus	RefSeq	ILMN_197869	ILMN_238321	VMN2R-PS14	NR_002888.2	NR_002888.2		545700	95007006	NR_002888.2	Vmn2r-ps14		ILMN_1225020	004560079	S	2728	GAGCTTCAGGACATAGAGAAGATAATGGCTCAGATTGAAAGGGGAGAGGC	4	+	145056840-145056889	4qE1	Mus musculus vomeronasal 2, receptor, pseudogene 14 (Vmn2r-ps14), non-coding RNA.				OTTMUSG00000011029	OTTMUSG00000011029
Mus musculus	RefSeq	ILMN_211537	ILMN_238321	VMN2R-PS14	NR_002888.2	NR_002888.2		545700	95007006	NR_002888.2	Vmn2r-ps14		ILMN_2616801	006860603	S	1207	GAGGCTTCATATGGTTTTGTGTCCATTCCTCCTTCGTCGAATTAAAGCTG	4	+	145055319-145055368	4qE1	Mus musculus vomeronasal 2, receptor, pseudogene 14 (Vmn2r-ps14), non-coding RNA.				OTTMUSG00000011029	OTTMUSG00000011029
Mus musculus	RefSeq	ILMN_220837	ILMN_220837	MLF2	NM_145385.1	NM_145385.1		30853	21703769	NM_145385.1	Mlf2	NP_663360.1	ILMN_3154095	000990148	A	1340	CCCCCACCCATCACAGAAACACTTTCCTTTACCCTTCTCTGCCTTTATAA	6	+	124886051-124886100	6qF2	Mus musculus myeloid leukemia factor 2 (Mlf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C77284; AU018944; AI256856	C77284; AU018944; AI256856
Mus musculus	RefSeq	ILMN_220837	ILMN_220837	MLF2	NM_145385.1	NM_145385.1		30853	21703769	NM_145385.1	Mlf2	NP_663360.1	ILMN_3075003	005260639	I	124	GGAGCTGAGATCACGATGTTCCGCTTCATGAGGGACGTGGAGCCTGAGGA	6	+	124882129-124882144:124882145-124882178	6qF2	Mus musculus myeloid leukemia factor 2 (Mlf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C77284; AU018944; AI256856	C77284; AU018944; AI256856
Mus musculus	RefSeq	ILMN_191408	ILMN_245996	SPRN	NM_183147.2	NM_183147.2		212518	56118240	NM_183147.2	Sprn	NP_898970.1	ILMN_2634644	007510195	S	425	AGAATGGGGCAATGGGAGGCAACGGAACCGACCGAGGAGTCTACAGCTAC	7	-	147339208-147339257	7qF4	Mus musculus shadow of prion protein (Sprn), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C630041J07	C630041J07
Mus musculus	RefSeq	ILMN_191408	ILMN_245996	SPRN	NM_183147.2	NM_183147.2		212518	56118240	NM_183147.2	Sprn	NP_898970.1	ILMN_1255499	003940301	S	2581	ACAGGTATTTGGAGGTCAACCATGCTGGTACATGCCCTCTGCACCGCCCC	7	-	147337052-147337101	7qF4	Mus musculus shadow of prion protein (Sprn), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C630041J07	C630041J07
Mus musculus	RefSeq	ILMN_191408	ILMN_245996	SPRN	NM_183147.2	NM_183147.2		212518	56118240	NM_183147.2	Sprn	NP_898970.1	ILMN_1254656	006020341	S	1140	GCTCCTCCTACAACATGCTACCAAAGCCAAGTAGTATGTTTCTTCCTGGC	7	-	147338493-147338542	7qF4	Mus musculus shadow of prion protein (Sprn), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C630041J07	C630041J07
Mus musculus	RefSeq	ILMN_197446	ILMN_197446	LOC328369	XM_286584.1	XM_286584.1			28477714	XM_286584.1	LOC328369		ILMN_1237553	000270743	S	208	GCAACAACCTCCGCCTCTGGAAACGGTATTGACCCGAGTGTGTGTCATGG										
Mus musculus	MEEBO	ILMN_195736	ILMN_195736	FBXL21	scl44712.6.1_254				31341019	NM_178674	Fbxl21		ILMN_2518214	000520471	S	2	CTTACTAAGTAAATTTACATTAAACTTATAACTAATATATAATTATTATG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]			
Mus musculus	MEEBO	ILMN_195736	ILMN_195736	FBXL21	scl44712.6.1_254				31341019	NM_178674	Fbxl21		ILMN_2766704	007150612	S	3389	GGGAAGCACATGGCTGCGTGCCGTGCAGACTTGCTCTGTGAGCATTAAAG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]			
Mus musculus	Riken	ILMN_206544	ILMN_206544	IQGAP1	ri|E030029K20|PX00205O08|AK087141|3362					AK087141	Iqgap1		ILMN_1231458	004060201	S	3051	TGCAGTACGTTAGAGCATGTCCTTCCTGACAGGCGTGTTTTCCGGGATAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The area of a motile cell closest to the direction of movement [goid 31252] [evidence IGI]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IGI]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Ras superfamily [goid 5099] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_250840	ILMN_250840	ENSA	NM_001026212.1	NM_001026212.1		56205	71061465	NM_001026212.1	Ensa	NP_001021383.1	ILMN_3032778	005700468	I	1984	GCCCAGGTCTCTGGCCATCATTCAGATTGGGTAGAAATAGATTGGTGAGG	3	+	95434123-95434172	3qF2.1	Mus musculus endosulfine alpha (Ensa), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence ISO]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO];  [goid 19870] [evidence ISO]	AI451924; 2610007F17Rik; 1700020C18Rik	AI451924; 2610007F17Rik; 1700020C18Rik
Mus musculus	RefSeq	ILMN_200876	ILMN_257987	LOC631965	XM_905931.2	XM_905931.2		631965	94408180	XM_905931.2	LOC631965	XP_911024.2	ILMN_2540316	003170768	S	712	GCCATTATTGAGAATCTTCCAGTACATCCAGCACAGACGTCTGCTTTTTG					PREDICTED: Mus musculus similar to AV320801 protein (LOC631965), mRNA.					
Mus musculus	RefSeq	ILMN_221007	ILMN_221007	CLYBL	NM_029556.2	NM_029556.2		69634	24475692	NM_029556.2	Clybl	NP_083832.1	ILMN_2729834	001780427	S	1000	CCACATCCATCAAGGAAAAATGATCTGTTAAATGAAGCCCTCCTCAGGCG	14	+	122801242-122801264:122801265-122801291	14qE5	Mus musculus citrate lyase beta like (Clybl), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Citrate lyase is a multienzyme complex with three constituents: the alpha subunit, citrate-ACP transferase; the beta subunit, citryl-ACP lyase; and the gamma subunit, an acyl-carrier protein which also carries the prosthetic group components. All three subunits are required for citrate lyase enzyme activity [goid 9346] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: citrate = acetate + oxaloacetate [goid 8815] [evidence IEA]; Catalysis of the cleavage of C-C bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond [goid 16830] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610033J05Rik; Clb; AI256068; 2310014M14Rik	0610033J05Rik; Clb; AI256068; 2310014M14Rik
Mus musculus	RefSeq	ILMN_224152	ILMN_252248	NECAB3	NM_021546.3	NM_021546.3		56846	148922938	NM_021546.3	Necab3	NP_067521.2	ILMN_2775695	000870521	S	1151	TAAAATCATGGAACCTGCCTGTTACCAGGCTAAAGGCCTGGTCATCTGGT				2qH1	Mus musculus N-terminal EF-hand calcium binding protein 3 (Necab3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The Golgi cisterna closest to the endoplasmic reticulum; the first processing compartment through which proteins pass after export from the ER [goid 137] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence TAS]; The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms [goid 17000] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	XB51; 2900010M17Rik; AI853434; Nip1; NECAB3	XB51; 2900010M17Rik; AI853434; Nip1; NECAB3
Mus musculus	RefSeq	ILMN_215563	ILMN_215563	PLK1	NM_011121.3	NM_011121.3		18817	128485537	NM_011121.3	Plk1	NP_035251.3	ILMN_1255053	000520427	S	2101	CCCTGCCCTCGCTCAGCCCACTGTATGAATTGTATAAATGTTTCTATTAA	7	+	129313287-129313336	7qF3	Mus musculus polo-like kinase 1 (Drosophila) (Plk1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Plk; STPK13	Plk; STPK13
Mus musculus	Riken	ILMN_206487	ILMN_206487	D430030M24RIK	ri|D430030M24|PX00194L17|AK085056|2931					AK085056	D430030M24Rik		ILMN_1225464	002450403	S	2854	GCAACAAGACAGGGCTCCTCACTGTCTTCACAACCTACTCAACAAATTGC										
Mus musculus	RefSeq	ILMN_214727	ILMN_313226	TMEM30C	XM_001479265.1	XM_001479265.1		71027	149267909	XM_001479265.1	Tmem30c	XP_001479315.1	ILMN_2651251	004070435	S	413	CGAACTGTGATCCGTTCCAAGTGTCCCACAATGACACTCCCATCATTCCT				16qC1.1	PREDICTED: Mus musculus transmembrane protein 30C (Tmem30c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_199068	ILMN_235358	GM239	NM_001033333.3	NM_001033333.3		237558	146198856	NM_001033333.3	Gm239	NP_001028505.1	ILMN_1251482	003130746	S	1011	CCACATCCAAGTCTGGGGAAGTCCGAAGTTTGTTAAGACCCAAGTGGGCC				10qD2	Mus musculus gene model 239, (NCBI) (Gm239), mRNA.					
Mus musculus	RefSeq	ILMN_190725	ILMN_322329	LOC100046959	XM_001477232.1	XM_001477232.1		100046959	149249458	XM_001477232.1	LOC100046959	XP_001477282.1	ILMN_3163283	002940521	A	437	GCTCTGCCGTGGGGCTCTTTCCAAACTTTAACACAATGGACCCTGTGCAG					PREDICTED: Mus musculus similar to zinc finger protein 533 (LOC100046959), mRNA.					
Mus musculus	RefSeq	ILMN_219614	ILMN_219614	TCP11	NM_013687.2	NM_013687.2		21463	24475950	NM_013687.2	Tcp11	NP_038715.1	ILMN_2951580	003390364	S	1866	CCCACCCCCCACAGCCAGCACACCAGGGCTGTAACAAGACAAACATGTCA	17	-	28206215-28206264	17qA3.3	Mus musculus t-complex protein 11 (Tcp11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		D17Ken1; MGC107229; Tcp-11	D17Ken1; MGC107229; Tcp-11
Mus musculus	RefSeq	ILMN_199576	ILMN_199576	LOC383675	XM_357180.1	XM_357180.1			38074488	XM_357180.1	LOC383675		ILMN_1213220	002970437	S	555	CCAGGAGCTACAGGCAGACATCAAAAACTTCAGAGACCGAGCTCCCCACT										
Mus musculus	RefSeq	ILMN_224686	ILMN_224686	GPR177	NM_026582.3	NM_026582.3		68151	98986315	NM_026582.3	Gpr177	NP_080858.3	ILMN_2996561	007000465	S	2160	CCCTCACATAGAGGGGTATACTCCTTGGGATGGTTTGGGCCAATAGGGGC	3	+	159597611-159597660	3qH4	Mus musculus G protein-coupled receptor 177 (Gpr177), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5031439A09Rik; AI987742; AI173978	5031439A09Rik; AI987742; AI173978
Mus musculus	RefSeq	ILMN_209797	ILMN_209797	RBM19	NM_028762.1	NM_028762.1		74111	30794153	NM_028762.1	Rbm19	NP_083038.1	ILMN_2599295	002370373	S	3688	GGCCAGCCATGCCAACTTCACTCATCCAACCAGGAAGACGTGGGGAGACA	5	+	120648716-120648765	5qF	Mus musculus RNA binding motif protein 19 (Rbm19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	NPO; AV302714; KIAA0682; 1200009A02Rik	NPO; AV302714; KIAA0682; 1200009A02Rik
Mus musculus	RefSeq	ILMN_190627	ILMN_225473	LOC640972	XM_918222.2	XM_918222.2		640972	94411025	XM_918222.2	LOC640972	XP_923315.1	ILMN_2711642	005080044	S	1203	ATGACCAGGGCAACTGTAAATGGGAGTGGGCTCCTTGGAGTTAGAACTAC					PREDICTED: Mus musculus similar to cyclin-dependent kinase 2-interacting protein (LOC640972), mRNA.					
Mus musculus	RefSeq	ILMN_245775	ILMN_245775	MYO1C	NM_001080775.1	NM_001080775.1		17913	124494241	NM_001080775.1	Myo1c	NP_001074244.1	ILMN_3110425	007570494	A	4841	GTCTGGCAGCACCGCTGGACTAAGGAGACCTAGCATGGGCAATATAAGCC	11	+	75487675-75487724	11qB5	Mus musculus myosin IC (Myo1c), transcript variant 1, mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; A myosin complex containing a class I myosin heavy chain and associated light chains; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments; myosin I complexes are involved in diverse processes related to membrane traffic and cell movement [goid 45160] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence NAS]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence TAS]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	NMI; myr2; C80397; MMIb; MYO1E; mm1beta	NMI; myr2; C80397; MMIb; MYO1E; mm1beta
Mus musculus	RefSeq	ILMN_214190	ILMN_214190	FAM132A	NM_026125.2	NM_026125.2		67389	142365660	NM_026125.2	Fam132a	NP_080401.1	ILMN_2645295	000870291	S	1014	CCTGGAGGCTGTATCAGGTCTGGAGAGCAACAGCAGGGTCTTCACAGTGC	4	+	155340194-155340243	4qE2	Mus musculus family with sequence similarity 132, member A (Fam132a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			1110035L05Rik	1110035L05Rik
Mus musculus	RefSeq	ILMN_209609	ILMN_209609	DDX42	NM_028074.3	NM_028074.3		72047	141800995	NM_028074.3	Ddx42	NP_082350.2	ILMN_2597441	001660072	S	3736	AAAAAAGTCTTCTGCTGAAATGATTTTGATTTTTGTTCTATCTTGTTTAT	11	+	106110178-106110227	11qE1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (Ddx42), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	B430002H05Rik; RHELP; AW556242; RNAHP; AW319508; 1810047H21Rik; SF3b125	B430002H05Rik; RHELP; AW556242; RNAHP; AW319508; 1810047H21Rik; SF3b125
Mus musculus	RefSeq	ILMN_214934	ILMN_237223	CCDC115	NM_027159.1	NM_027159.1		69668	58037168	NM_027159.1	Ccdc115	NP_081435.1	ILMN_2672035	006370296	S	346	AGGCTCTGCGAGAGGAGTTGGACTCCAAGTGCCTACAGCTGCTCAGTGAC	1	-	34496122-34496171	1qB	Mus musculus coiled-coil domain containing 115 (Ccdc115), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ccp1; 2310061I09Rik	Ccp1; 2310061I09Rik
Mus musculus	RefSeq	ILMN_212618	ILMN_212618	PICK1	NM_008837.2	NM_008837.2		18693	113930723	NM_008837.2	Pick1	NP_032863.2	ILMN_2628488	002060341	S	1946	CACCTCAGCAGCCTATATTTATTTGTTTCTGGTTTAGCCTCAAGGGCTGG	15	+	79079807-79079856	15qE1	Mus musculus protein interacting with C kinase 1 (Pick1), transcript variant 1, mRNA.	Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50803] [evidence NAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Interacting selectively with protein kinase C [goid 5080] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Prkcabp	Prkcabp
Mus musculus	RefSeq	ILMN_212618	ILMN_212618	PICK1	NM_008837.2	NM_008837.2		18693	113930723	NM_008837.2	Pick1	NP_032863.2	ILMN_3092815	006900367	A	1773	CAGCTAGAGGGAGAGCTGGGCTTTGGACAGAAAAGAGAAGGGGCTGGAGC	15	+	79079634-79079683	15qE1	Mus musculus protein interacting with C kinase 1 (Pick1), transcript variant 1, mRNA.	Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50803] [evidence NAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Interacting selectively with protein kinase C [goid 5080] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Prkcabp	Prkcabp
Mus musculus	RefSeq	ILMN_212618	ILMN_212618	PICK1	NM_008837.2	NM_008837.2		18693	113930723	NM_008837.2	Pick1	NP_032863.2	ILMN_1246720	001710397	S	1213	CCAGGAGGCTCGAGCCCGCTTCTCCCAGATGCGCAAAGATGTTCTGGAGA	15	+	79078650-79078699	15qE1	Mus musculus protein interacting with C kinase 1 (Pick1), transcript variant 1, mRNA.	Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50803] [evidence NAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Interacting selectively with protein kinase C [goid 5080] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Prkcabp	Prkcabp
Mus musculus	RefSeq	ILMN_202494	ILMN_323334	LOC100036521	XM_001474303.1	XM_001474303.1		100036521	149254844	XM_001474303.1	LOC100036521	XP_001474353.1	ILMN_1260397	000630131	S	1485	GCTGAGCAGGATTGCTGTCGGTCAGTACACGACTAAGAGAGTTGGTCTAG	6	+	8378096-8378145	6qA1	PREDICTED: Mus musculus hypothetical gene LOC100036521 (LOC100036521), mRNA.					
Mus musculus	Riken	ILMN_202485	ILMN_202485	6530401D06RIK	ri|6530401D06|PX00048D19|AK018306|1121					AK018306	6530401D06Rik		ILMN_1255262	006270050	S	952	GAAAAGGAGGAAGCAGCGCCATGAAGAAGACGGGGAGATGGGAGTCTGTG										
Mus musculus	RefSeq	ILMN_199487	ILMN_329357	LOC100041608	XM_001475909.1	XM_001475909.1		100041608	149273100	XM_001475909.1	LOC100041608	XP_001475959.1	ILMN_1239158	000010722	S	578	CACTTCGCCAGGGCCCTGATTGGCAGAGAGGTACAACACAAATTTGAGGG	Y|NT_166344.1	+	170749-170798		PREDICTED: Mus musculus similar to putative (LOC100041608), mRNA.					
Mus musculus	MEEBO	ILMN_195711	ILMN_195711	A630054L15RIK	scl46540.20_142				22122406	NM_145969	A630054L15Rik		ILMN_1242309	000780746	S	2	CCAGCATTAGAAGGAATCAGTGCTTAGGGTGTTCTGTAATGCCTAGTGCC										
Mus musculus	MEEBO	ILMN_195711	ILMN_195711	A630054L15RIK	scl46540.20_142				22122406	NM_145969	A630054L15Rik		ILMN_2633030	004290356	S	2359	GGACTGCATTTCATCTTGGTCTCACAGCCTACGACACAGGACACTTGTAG										
Mus musculus	RefSeq	ILMN_200837	ILMN_200837	LOC385392	XM_358222.1	XM_358222.1			38086456	XM_358222.1	LOC385392		ILMN_1218446	001820242	S	99	TCAAGCCTCTGATCACAATGCTGTCCCTGTTCTAGGCTCCAGACAGGTGC										
Mus musculus	RefSeq	ILMN_228039	ILMN_228039	OLFR1089	NM_001011771.1	NM_001011771.1		257933	58801319	NM_001011771.1	Olfr1089	NP_001011771.1	ILMN_2925855	001740592	S	698	GCAGGCACAAGGCTTTTGCAAATTGTGGATCACACATAACTGTCGTCACC	2	-	86573020-86573069	2qD	Mus musculus olfactory receptor 1089 (Olfr1089), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR193-1	MOR193-1
Mus musculus	RefSeq	ILMN_222317	ILMN_321145	4930401A09RIK	XM_001473599.1	XM_001473599.1		75777	149266341	XM_001473599.1	4930401A09Rik	XP_001473649.1	ILMN_2747951	006450753	S	1238	TCTATGGAAGTGAACACATTAAGAGCATAGAGACTAAAAGCCTCCTTTCC				15qA1	PREDICTED: Mus musculus RIKEN cDNA 4930401A09 gene (4930401A09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212786	ILMN_212786	DCTN4	NM_026302.3	NM_026302.3		67665	118131213	NM_026302.3	Dctn4	NP_080578.1	ILMN_2712305	003420497	S	3562	AGGCATACTGCCCTGAATGCCCTTGCATCGTTGTAATGAGCATCCTCCTT	18	+	60718264-60718313	18qD3	Mus musculus dynactin 4 (Dctn4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	1110001K06Rik; C130039E17Rik; 4930547K17Rik; p62	1110001K06Rik; C130039E17Rik; 4930547K17Rik; p62
Mus musculus	RefSeq	ILMN_196668	ILMN_232786	ALOX5	NM_009662.2	NM_009662.2		11689	116686109	NM_009662.2	Alox5	NP_033792.1	ILMN_2607112	001260059	S	2202	GCTCTCTGGGAAGGCCAGTGGCTTTATTAGCCAGATCCCAGCTTGCCTGG	6	-	116360664-116360713	6qE3	Mus musculus arachidonate 5-lipoxygenase (Alox5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (6E,8Z,11Z,14Z)-(5S)-5-hydroperoxycosa-6,8,11,14-tetraenoate [goid 4051] [evidence IEA]	F730011J02; AI850497; 5LX; 5-LOX; 5LO; 5-LO	F730011J02; AI850497; 5LX; 5-LOX; 5LO; 5-LO
Mus musculus	RefSeq	ILMN_232786	ILMN_232786	ALOX5	NM_009662.2	NM_009662.2		11689	116686109	NM_009662.2	Alox5	NP_033792.1	ILMN_2928453	006960259	S	2717	CTACCTCCTCCAACTGACAAGGTCTTTGCCCCCCACTCCATACCAGTGGC	6	-	116360149-116360198	6qE3	Mus musculus arachidonate 5-lipoxygenase (Alox5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (6E,8Z,11Z,14Z)-(5S)-5-hydroperoxycosa-6,8,11,14-tetraenoate [goid 4051] [evidence IEA]	F730011J02; AI850497; 5LX; 5-LOX; 5LO; 5-LO	F730011J02; AI850497; 5LX; 5-LOX; 5LO; 5-LO
Mus musculus	RefSeq	ILMN_196668	ILMN_232786	ALOX5	NM_009662.2	NM_009662.2		11689	116686109	NM_009662.2	Alox5	NP_033792.1	ILMN_1221016	005820286	S	2041	GCCAGTGAAGGAAGCCATGATCCGATTCCGCAAGAACCTGGAGGCCATCG	6	-	116360825-116360874	6qE3	Mus musculus arachidonate 5-lipoxygenase (Alox5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (6E,8Z,11Z,14Z)-(5S)-5-hydroperoxycosa-6,8,11,14-tetraenoate [goid 4051] [evidence IEA]	F730011J02; AI850497; 5LX; 5-LOX; 5LO; 5-LO	F730011J02; AI850497; 5LX; 5-LOX; 5LO; 5-LO
Mus musculus	RefSeq	ILMN_212773	ILMN_212773	COPZ1	NM_019817.1	NM_019817.1		56447	9789912	NM_019817.1	Copz1	NP_062791.1	ILMN_2862093	001430500	S	1305	GTAATGACGTTGGCCTTGCCGTGTTCCTTCTCCTCAGCGCCACACTCACA	15	+	103129936-103129985	15qF3	Mus musculus coatomer protein complex, subunit zeta 1 (Copz1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence ISS]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC118060; AA407760; 5930435A22Rik; D4Ertd360e	MGC118060; AA407760; 5930435A22Rik; D4Ertd360e
Mus musculus	RefSeq	ILMN_198716	ILMN_198716	LOC194711	XM_111871.3	XM_111871.3			38087003	XM_111871.3	LOC194711		ILMN_2532674	000130541	S	1694	CAGCTCTGGCTGGAAATGCGGAGGTTCAGGAGGGGGAATGGGTGGAAGTA										
Mus musculus	RefSeq	ILMN_199530	ILMN_199530	LOC382683	XM_356624.1	XM_356624.1			38074007	XM_356624.1	LOC382683		ILMN_2535555	004610253	S	210	CTTTGCTCCCATCCTCAGAGAGGTCAACTGCAGAGTCTGTGGCGGCTTCG										
Mus musculus	MEEBO	ILMN_185271	ILMN_185271	SCL0002531.1_14	scl0002531.1_14	BC004723.1			14709389	BC004723.1	scl0002531.1_14		ILMN_1238089	000060494	S	8	CCCCACTATACCTGTCTGGGAAAACAATTCAGGATTTTGATGCATGCAGG										
Mus musculus	RefSeq	ILMN_215992	ILMN_215992	SPEER6-PS1	NR_001581.2	NR_001581.2		73266	142364245	NR_001581.2	Speer6-ps1		ILMN_2666101	006660402	S	741	GGCTGTAGGTCTGTACTTCTTAATATGCAGTGAAAGGGTGCTGATGTAGA	13	+	3188686-3188735	13qA1	Mus musculus spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1 (Speer6-ps1), non-coding RNA.				SPEER-6; 1700039A02Rik	SPEER-6; 1700039A02Rik
Mus musculus	Riken	ILMN_206138	ILMN_206138	A430077H15RIK	ri|A430077H15|PX00137F08|AK079826|1280					AK079826	A430077H15Rik		ILMN_1234833	004250286	S	1188	GGCTTTAACCCCAGCAGTCGGGAAGGAGGCACAGATAGATAGACCTCTGT										
Mus musculus	MEEBO	ILMN_213933	ILMN_213933	MERG	scl0004197.1_205				2645990	AF034762	MERG		ILMN_2642435	002260411	S	286	CAGGCTTGGGGGAGCTAAGTCCTCCATGGCGATTCCAGCCGGGAAGGAGA										
Mus musculus	RefSeq	ILMN_211957	ILMN_211957	6430598A04RIK	NM_175521.3	NM_175521.3		243300	37537543	NM_175521.3	6430598A04Rik	NP_780730.2	ILMN_2621130	007200427	S	3146	TTAGTCTGGAGGGCAATTTCTGGGCCCTTCTGACCTACTCCTGAGCAGGA	5	-	138172496-138172545	5qG2	Mus musculus RIKEN cDNA 6430598A04 gene (6430598A04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217223	ILMN_217223	HNRNPUL1	NM_144922.2	NM_144922.2		232989	141801559	NM_144922.2	Hnrnpul1	NP_659171.1	ILMN_2688429	001780564	S	2616	ACTATGGAGGCTACTCGGGCAGCACACAGGGGGGCACAAGCACACAGTAG	7	-	26507265-26507265:26507266-26507314	7qA3	Mus musculus heterogeneous nuclear ribonucleoprotein U-like 1 (Hnrnpul1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E1BAP5; E130317O14Rik; E1B-AP5; MGC78330; MGC36621	E1BAP5; E130317O14Rik; E1B-AP5; MGC78330; MGC36621
Mus musculus	RefSeq	ILMN_233225	ILMN_233225	RPS4X	NM_009094.1	NM_009094.1		20102	6677804	NM_009094.1	Rps4x	NP_033120.1	ILMN_2948086	004120224	S	408	AGGAATCCCGCACCTGGTGACCCATGATGCTCGTACTATTCGGTACCCTG	X	-	99381815-99381864	XqD	Mus musculus ribosomal protein S4, X-linked (Rps4x), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence ISA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC118104; MGC102174; Rps4-1; Rps4	MGC118104; MGC102174; Rps4-1; Rps4
Mus musculus	MEEBO	ILMN_192834	ILMN_192834	C130020C13RIK	scl27924.1_36						C130020C13Rik		ILMN_2491756	000610133	S	10	GGGGAGGATGTGGTGAAGGTGGACCTTCTACAATCTGTCATGAACTGTGA										
Mus musculus	RefSeq	ILMN_215020	ILMN_215020	SPRR1A	NM_009264.2	NM_009264.2		20753	61675694	NM_009264.2	Sprr1a	NP_033290.1	ILMN_2975250	006560093	S	692	GGCTACACTTTTCATGGCTCAGGATTCATCTGAAGGGGGTGAGGAGTGAG	3	-	92287924-92287973	3qF1	Mus musculus small proline-rich protein 1A (Sprr1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	mSPRR1A; SPR1a; AI528815	mSPRR1A; SPR1a; AI528815
Mus musculus	MEEBO	ILMN_188414	ILMN_188414	IGHV2S1_V00767$J00492_IG_HEAVY_VARIABLE_2S1_5	IGHV2S1_V00767$J00492_Ig_heavy_variable_2S1_5						IGHV2S1_V00767$J00492_Ig_heavy_variable_2S1_5		ILMN_1232799	006580504	S	13	ACTCTTCTGCCTGGTAACATTCCCAAGCTGTATCCTTTCCCAGGTACAGC										
Mus musculus	RefSeq	ILMN_192125	ILMN_258289	ZMIZ1	NM_183208.2	NM_183208.2		328365	41053863	NM_183208.2	Zmiz1	NP_899031.2	ILMN_2653029	001030593	S	3372	GTTCTGACCAGCCCCATCCCTCCATACAACAAGGTTTGCACGTACCACAC	14	+	26480769-26480818	14qA3	Mus musculus zinc finger, MIZ-type containing 1 (Zmiz1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E330020C23; Rai17; BC065120	E330020C23; Rai17; BC065120
Mus musculus	RefSeq	ILMN_192125	ILMN_258289	ZMIZ1	NM_183208.2	NM_183208.2		328365	41053863	NM_183208.2	Zmiz1	NP_899031.2	ILMN_1224736	005670523	S	5168	GGTGATGCCAGGTTGTCCGCTCACATGAGTCCCATCTGTAAATTCTTTGC	14	+	26483983-26484032	14qA3	Mus musculus zinc finger, MIZ-type containing 1 (Zmiz1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E330020C23; Rai17; BC065120	E330020C23; Rai17; BC065120
Mus musculus	RefSeq	ILMN_258289	ILMN_258289	ZMIZ1	NM_183208.2	NM_183208.2		328365	41053863	NM_183208.2	Zmiz1	NP_899031.2	ILMN_2879378	006040168	S	4792	ACATGGTAGGGAAGCAGCATAGGCCCCCAGGGAAACGACTCCACAGCAGG	14	+	26483607-26483656	14qA3	Mus musculus zinc finger, MIZ-type containing 1 (Zmiz1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E330020C23; Rai17; BC065120	E330020C23; Rai17; BC065120
Mus musculus	RefSeq	ILMN_212701	ILMN_212701	MAFF	NM_010755.3	NM_010755.3		17133	118130100	NM_010755.3	Maff	NP_034885.1	ILMN_2629354	003170288	S	7	AGAGCGGCCAAGGACCGCCACCGCGACAGCCGCGACAAGCACGCACTGAG	15	+	79178114-79178163	15qE1	Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) (Maff), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Any process that modulates the frequency, rate or extent of epidermal cell differentiation [goid 45604] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212701	ILMN_212701	MAFF	NM_010755.3	NM_010755.3		17133	118130100	NM_010755.3	Maff	NP_034885.1	ILMN_1256996	003840243	S	1320	CCACTGGTAGAGAGAGGCAAACACTACAGTCCTGATGCAGGAGAATGGGG	15	+	79189026-79189075	15qE1	Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) (Maff), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Any process that modulates the frequency, rate or extent of epidermal cell differentiation [goid 45604] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_253999	ILMN_253999	CRIM2	NM_001029985.1	NM_001029985.1		333088	71725380	NM_001029985.1	Crim2	NP_001025156.1	ILMN_2907964	006760243	S	4638	CAGAGGTTACCCCTTGGTGAGCAGTAGTGGAGACTGCCCTGCTCAGGCAA	6	-	29432116-29432165	6qA3.3	Mus musculus cysteine rich BMP regulator 2 (chordin like) (Crim2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity [goid 30513] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KCP; AW060220; Gm793	KCP; AW060220; Gm793
Mus musculus	RefSeq	ILMN_214982	ILMN_214982	3300002I08RIK	NM_027017.1	NM_027017.1		69277	21746148	NM_027017.1	3300002I08Rik	NP_081293.2	ILMN_1238502	003190064	S	464	GCTGTCCTGAGCTCCAATCACAGTGCTCAGAAGTTACTTCCTCTTCCTCC	2	-	150136807-150136856	2qG3	Mus musculus RIKEN cDNA 3300002I08 gene (3300002I08Rik), mRNA.				RP23-91K11.3; 2900016H11Rik	RP23-91K11.3; 2900016H11Rik
Mus musculus	RefSeq	ILMN_210036	ILMN_210036	OLFR477	NM_146926.1	NM_146926.1		258928	33239111	NM_146926.1	Olfr477	NP_667137.1	ILMN_2601552	000430731	S	805	CACAGAACAAGATACTGTCTGTATTCTACACAGTGGTGATCCCCATGCTC	7	+	115134685-115134734	7qE3	Mus musculus olfactory receptor 477 (Olfr477), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-1	MOR204-1
Mus musculus	RefSeq	ILMN_200646	ILMN_200646	LOC383415	XM_357041.1	XM_357041.1			38084706	XM_357041.1	LOC383415		ILMN_1249351	002370403	S	231	GTGGGTCCCTCACCACCCTCACACACTGCAATACCGAAAGGCTAAGGAGA										
Mus musculus	RefSeq	ILMN_201288	ILMN_201288	LOC382372	XM_356470.1	XM_356470.1			38090528	XM_356470.1	LOC382372		ILMN_2541760	004050692	S	442	TGCCCGATGCAGGAGGAATCAGTTCACACGGTAACCCAATCACGGACCCG										
Mus musculus	RefSeq	ILMN_220198	ILMN_220198	NIP7	NM_025391.1	NM_025391.1		66164	13928673	NM_025391.1	Nip7	NP_079667.1	ILMN_2959122	004920274	S	1252	TGTGAGCCACCGTATAGGTGCCAGAAATTAAACTCAGGTCCTCTGCAGGG	8	+	109583047-109583096	8qD3	Mus musculus nuclear import 7 homolog (S. cerevisiae) (Nip7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The aggregation, arrangement and bonding together of the mature ribosome and of its subunits [goid 42255] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA408773; 1110017C15Rik	AA408773; 1110017C15Rik
Mus musculus	RefSeq	ILMN_220198	ILMN_220198	NIP7	NM_025391.1	NM_025391.1		66164	13928673	NM_025391.1	Nip7	NP_079667.1	ILMN_2755730	000430484	S	430	CACATCTCAGTACCAGGGAGTGGTTGTCTATTCCATGGCGGACATTCCTC	8	+	109582036-109582085	8qD3	Mus musculus nuclear import 7 homolog (S. cerevisiae) (Nip7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The aggregation, arrangement and bonding together of the mature ribosome and of its subunits [goid 42255] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA408773; 1110017C15Rik	AA408773; 1110017C15Rik
Mus musculus	RefSeq	ILMN_220198	ILMN_220198	NIP7	NM_025391.1	NM_025391.1		66164	13928673	NM_025391.1	Nip7	NP_079667.1	ILMN_2718990	007320669	S	1128	TGGTTTTATATTTGTTATTTCATATGTGTGAGTGTTTTGTTGGCATGTAC	8	+	109582923-109582972	8qD3	Mus musculus nuclear import 7 homolog (S. cerevisiae) (Nip7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The aggregation, arrangement and bonding together of the mature ribosome and of its subunits [goid 42255] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA408773; 1110017C15Rik	AA408773; 1110017C15Rik
Mus musculus	RefSeq	ILMN_187318	ILMN_252969	4930503H13RIK	XR_004592.1	XR_004592.1		74941	94409576	XR_004592.1	4930503H13Rik		ILMN_2443074	007380543	S	245	TGGAGTGTGACCTGAGCAATATGGAAATCACTGAGGGAGCCCACCAGTAC				XqF4	PREDICTED: Mus musculus RIKEN cDNA 4930503H13 gene (4930503H13Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_221168	ILMN_221168	LCE1A2	NM_028625.2	NM_028625.2		73722	115270956	NM_028625.2	Lce1a2	NP_082901.1	ILMN_2731819	004780048	S	637	GTAGTCTTGTGAGATGTCCCCTTTTGAAGGACCTGTATTCTCAGGGACAA	3	-	92472563-92472612	3qF1	Mus musculus late cornified envelope 1A2 (Lce1a2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	Sprrl2; 1110004E04Rik	Sprrl2; 1110004E04Rik
Mus musculus	RefSeq	ILMN_216459	ILMN_216459	IL23A	NM_031252.2	NM_031252.2		83430	133892789	NM_031252.2	Il23a	NP_112542.1	ILMN_2671320	001400369	S	746	TCAGCCCAGACATCTACCAGTTAATTAACCCATTAGGACTTGTGCTGTTC	10	-	127733759-127733808	10qD3	Mus musculus interleukin 23, alpha subunit p19 (Il23a), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling [goid 48771] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	p19	p19
Mus musculus	MEEBO	ILMN_214657	ILMN_214657	4833442J19RIK	scl0320204.2_97	NM_177101.2			31342810	NM_177101.2	4833442J19Rik		ILMN_2650428	007570735	S	897	GAGGCCTCTTGAGTCTGGGTTTTTAGCTGAGACTAAGTGAGAAGACAGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IEA]	Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196513	ILMN_231365	1700021P22RIK	XM_924733.3	XM_924733.3		75538	149257144	XM_924733.3	1700021P22Rik	XP_929826.2	ILMN_1237313	002030075	S	407	TTCCGAACTGGCCGCGCCTTCTACTTGCAACTGCGCTCTCCTCCAGAGAC				7qB4	PREDICTED: Mus musculus RIKEN cDNA 1700021P22 gene, transcript variant 15 (1700021P22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217174	ILMN_217174	MOCS1	NM_020042.1	NM_020042.1		56738	30524915	NM_020042.1	Mocs1	NP_064426.1	ILMN_2679885	000060600	S	1447	GGTCTGCCCACACCTGTCTACTCTGGCATGTGTCAGGAAAAGGAGCGTCA	17	+	49594647-49594696	17qC	Mus musculus molybdenum cofactor synthesis 1 (Mocs1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands [goid 32324] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI043170; AW536397; 3110045D15Rik	AI043170; AW536397; 3110045D15Rik
Mus musculus	RefSeq	ILMN_197654	ILMN_197654	LOC239659	XM_139575.2	XM_139575.2			38077145	XM_139575.2	LOC239659		ILMN_2528890	006020121	S	1677	CAGCCGCTTAGGGAGGGACTACCTTGGGATCCAATGAAACCGGCCAGAGA										
Mus musculus	RefSeq	ILMN_198005	ILMN_198005	LOC328884	XM_283482.2	XM_283482.2			38080220	XM_283482.2	LOC328884		ILMN_1257040	006220162	S	533	GCCACCATACAGTCAGAAAAGCTACAAGGAAATCAGTGCTGGCTATGCTC										
Mus musculus	MEEBO	ILMN_216134	ILMN_216134	2610016F04RIK	scl066923.1_197	NM_025847.1			21313235	NM_025847.1	2610016F04Rik		ILMN_1225027	000130630	S	2024	CCCAAGAAAGAGTGTAAGTGGACACAAGCTGTGCCTGCACATAGCTGTGC										
Mus musculus	RefSeq	ILMN_219524	ILMN_219524	ORAOV1	NM_028184.3	NM_028184.3		72284	118130438	NM_028184.3	Oraov1	NP_082460.2	ILMN_2882820	000460056	S	1819	CCTCTCAGGTATTCAGCACCACTCTCTCAGGTGCCCAGGATCAGGGACTC	7	+	152106902-152106951	7qF5	Mus musculus oral cancer overexpressed 1 (Oraov1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2210010N10Rik; TAOS1	2210010N10Rik; TAOS1
Mus musculus	RefSeq	ILMN_217090	ILMN_217090	1300017J02RIK	NM_027918.1	NM_027918.1		71775	21313641	NM_027918.1	1300017J02Rik	NP_082194.1	ILMN_3004177	002190500	S	2209	AGGGGCTGGGGACCCAACTGCTTGCCTCCATGTGGACTTGTGCAGAATGA	9	-	103108696-103108745	9qF1	Mus musculus RIKEN cDNA 1300017J02 gene (1300017J02Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222547	ILMN_222547	URM1	NM_026615.4	NM_026615.4		68205	146141213	NM_026615.4	Urm1	NP_080891.1	ILMN_2751247	002450678	S	2073	GCTCCAACAGCCCCCTCCCATGCACCTCGTGGCCCTTGTTTTTGAGGAAA				2qB	Mus musculus ubiquitin related modifier 1 homolog (S. cerevisiae) (Urm1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		2900073H19Rik; RP23-443G7.1	2900073H19Rik; RP23-443G7.1
Mus musculus	RefSeq	ILMN_256105	ILMN_256105	GFOD1	NM_001033399.1	NM_001033399.1		328232	85701892	NM_001033399.1	Gfod1	NP_001028571.1	ILMN_2859032	007050138	S	6242	CCCTGTCCCTGGTTTAGGGGAGGGAGAACCTTCTAGCAACTACGGCTTTG	13	-	43206853-43206902	13qA4	Mus musculus glucose-fructose oxidoreductase domain containing 1 (Gfod1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AI850995; 9630032O13	AI850995; 9630032O13
Mus musculus	RefSeq	ILMN_212567	ILMN_212567	OLFR1256	NM_146983.1	NM_146983.1		258985	22128964	NM_146983.1	Olfr1256	NP_667194.1	ILMN_1254785	001230451	S	601	GGAGGGCTGATCTGCACGGTTGTGTTTATACTCCTGCTCATCTCTTATGG	2	-	89675450-89675499	2qE1	Mus musculus olfactory receptor 1256 (Olfr1256), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-1	MOR231-1
Mus musculus	RefSeq	ILMN_188219	ILMN_215161	RASAL2	NM_177644.4	NM_177644.4		226525	116686098	NM_177644.4	Rasal2	NP_808312.2	ILMN_1217344	005270576	S	355	CAGACAGATTCCACCAAAGGGCGCTGTCTGAGGAGAACTGTCAGTGTTCC	1	-	159216911-159216960	1qH1	Mus musculus RAS protein activator like 2 (Rasal2), mRNA.				A330066M24Rik; 6530401P13	A330066M24Rik; 6530401P13
Mus musculus	RefSeq	ILMN_219835	ILMN_215161	RASAL2	NM_177644.4	NM_177644.4		226525	116686098	NM_177644.4	Rasal2	NP_808312.2	ILMN_1233634	006510291	S	868	GCCTCCGAGAGAGATAAGTGGATGGAAAACCTTCGAAGGACCGTTCAGCC	1	-	159107783-159107832	1qH1	Mus musculus RAS protein activator like 2 (Rasal2), mRNA.				A330066M24Rik; 6530401P13	A330066M24Rik; 6530401P13
Mus musculus	RefSeq	ILMN_200689	ILMN_200689	LOC383453	XM_357069.1	XM_357069.1			38085231	XM_357069.1	LOC383453		ILMN_1223220	005820328	S	903	TGAGTCGGTGTTTCTCATCGCACCCAGCGCCTATGGAGGAGGCATTGGAG										
Mus musculus	Riken	ILMN_202147	ILMN_202147	2900058M19RIK	ri|2900058M19|ZX00069O06|AK013726|1855					AK013726	2900058M19Rik		ILMN_1242659	004760270	S	1518	GGCTATCGTGTTTCCGAGCTTTTGTCCTTGTGGTTGGTGGTGGTGGTACG										
Mus musculus	RefSeq	ILMN_211150	ILMN_211150	CNTN6	NM_017383.3	NM_017383.3		53870	50233919	NM_017383.3	Cntn6	NP_059079.2	ILMN_2613068	000050767	S	3332	GCCCAGCACCCAGTCCCTGTCAATGGTTGGGGTTTTTTACTGTTTTGCTA	6	+	104813152-104813201	6qE1	Mus musculus contactin 6 (Cntn6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NB-3	NB-3
Mus musculus	RefSeq	ILMN_221249	ILMN_221249	RDH5	NM_134006.4	NM_134006.4		19682	94421441	NM_134006.4	Rdh5	NP_598767.1	ILMN_1221292	005890025	S	1111	TCCCCGGCCCGCCCAGTCAGTCTCCTGATTCCAGCTTTACAGCAAGAGGC	10	-	128350746-128350768:128350769-128350795	10qD3	Mus musculus retinol dehydrogenase 5 (Rdh5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IEA]	9-cis; AI987873; RDH4; cRDH	9-cis; AI987873; RDH4; cRDH
Mus musculus	RefSeq	ILMN_215760	ILMN_215760	CMTM2B	NM_028524.2	NM_028524.2		75502	142366677	NM_028524.2	Cmtm2b	NP_082800.1	ILMN_2663294	007560725	S	560	GACCTGTGTCTTCAGAGGAGACAATTTAAAAGCAGGAAGCTTCGAAAGTT	8	+	106854351-106854400	8qD3	Mus musculus CKLF-like MARVEL transmembrane domain containing 2B (Cmtm2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	Cklfsf22; 1700013O04Rik; Cklfsf2b	Cklfsf22; 1700013O04Rik; Cklfsf2b
Mus musculus	MEEBO	ILMN_221704	ILMN_221704	0610009B14RIK	scl42290.2.1_321	XM_127006.1			20909473	XM_127006.1	0610009B14Rik		ILMN_2739275	001170687	S	863	CAGACCTCTCAGAAATGCTTATGATGCTGTCCCTTGAGGGTACTATGTGG										
Mus musculus	RefSeq	ILMN_199891	ILMN_199891	LOC381547	XM_358614.1	XM_358614.1			38078774	XM_358614.1	LOC381547		ILMN_1217719	006840739	S	553	TCTTGGAAGTGAGAGCTGTTTCCTTCAACGGAGCGAAGCAACTGGCCTCG										
Mus musculus	RefSeq	ILMN_215717	ILMN_241969	TRIM67	XM_001004593.1	XM_001004593.1		330863	94385478	XM_001004593.1	Trim67	XP_001004593.1	ILMN_2662793	002940672	S	3205	AGCTTGCTAAGTGCGTGCAAACAGCCCAGAGCAGCCAGATAGAGATGTGG				8qE2	PREDICTED: Mus musculus tripartite motif-containing 67, transcript variant 1 (Trim67), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210979	ILMN_210979	ECD	NM_027475.2	NM_027475.2		70601	142383768	NM_027475.2	Ecd	NP_081751.1	ILMN_2611244	000580196	S	2209	CAAGTCAGCCAGTGAAGGACTAGCCTGCACATCAGCCACCCTTCTCAGGA	14	-	21139910-21139945:21139946-21139959	14qA3	Mus musculus ecdysoneless homolog (Drosophila) (Ecd), mRNA.				5730461K03Rik; Hsgt1	5730461K03Rik; Hsgt1
Mus musculus	Riken	ILMN_205040	ILMN_205040	A630051D19RIK	ri|A630051D19|PX00146N05|AK041991|2514					AK041991	A630051D19Rik		ILMN_1260015	004230021	S	2101	CATGTGAATGCAACTGAGCATAGGAGCTCTTGACGAGCAACAAGTACTCT										
Mus musculus	MEEBO	ILMN_209602	ILMN_209602	2510002A14RIK	scl0072313.2_218	NM_028194.1			33859713	NM_028194.1	2510002A14Rik		ILMN_2675908	004560673	S	3858	AGCGGCCCAGACCACGATAGAAACTGCCATTCACTCTCTGATCGAAACCT										
Mus musculus	RefSeq	ILMN_212802	ILMN_212802	CDKN2B	NM_007670.3	NM_007670.3		12579	118131209	NM_007670.3	Cdkn2b	NP_031696.1	ILMN_1227240	005550240	S	1155	GACAGACTCAACGTCCACAAAGCCCAGTGATGAATTGTAGTGGTAGCAGG	4	-	88952308-88952357	4qC4	Mus musculus cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) (Cdkn2b), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	p15INK4b; AV083695; p15(INK4b); MTS2; INK4b; p15	p15INK4b; AV083695; p15(INK4b); MTS2; INK4b; p15
Mus musculus	RefSeq	ILMN_200016	ILMN_238034	FAM18A	NM_001013778.1	NM_001013778.1		383103	85701471	NM_001013778.1	Fam18a	NP_001013800.1	ILMN_1220217	002510554	S	401	CTTTAGAAAGGCCAAGATCAGGCACCCCCTGGCTACCTTCTTCCACCTGT	16	-	10428867-10428896:10447023-10447042	16qA1	Mus musculus family with sequence similarity 18, member A (Fam18a), mRNA.					
Mus musculus	Riken	ILMN_206409	ILMN_206409	C130087G11RIK	ri|C130087G11|PX00172E05|AK081920|3003					AK081920	C130087G11Rik		ILMN_2579870	004780692	S	2387	ATCTCATTTGTATAACTGTTGAACTTCTAGCTTCCGCCCCGTGCCTCTGG										
Mus musculus	RefSeq	ILMN_213221	ILMN_213221	NEK4	NM_011849.2	NM_011849.2		23955	133893154	NM_011849.2	Nek4	NP_035979.1	ILMN_2634859	004120717	S	2434	CAGGAGCACATGGGAGACAAGTATACAACTTACTGTGTGAAAGCTCGCCA	14	+	31800307-31800356	14qB	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 4 (Nek4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_203302	ILMN_212594	FAM152A	NM_024282.3	NM_024282.3		78825	119637811	NM_024282.3	Fam152a	NP_077244.1	ILMN_1253075	005130465	S	268	TGAGCTGGAGCTGCCTCTCCACCTGTCTGGCCGGGTCCTCGTACAGGTTT	1	+	180117815-180117864	1qH4	Mus musculus family with sequence similarity 152, member A (Fam152a), mRNA.				DKFZp586C1019	DKFZp586C1019
Mus musculus	RefSeq	ILMN_212594	ILMN_212594	FAM152A	NM_024282.3	NM_024282.3		78825	119637811	NM_024282.3	Fam152a	NP_077244.1	ILMN_2741738	001660671	S	2415	ATCCAAGGTACTGACTGCAGCTTTAGATACGTGATTAGTGTGAGAGTCAC	1	+	180180930-180180979	1qH4	Mus musculus family with sequence similarity 152, member A (Fam152a), mRNA.				DKFZp586C1019	DKFZp586C1019
Mus musculus	RefSeq	ILMN_242042	ILMN_242042	VTI1A	NM_016862.2	NM_016862.2		53611	31980822	NM_016862.2	Vti1a	NP_058558.1	ILMN_2925275	003440008	S	2997	ATTCACCAAGGGTGGGGACTGGTCTGAATGTCCCTGGTCGGCCCTCTGGC	19	+	55679403-55679452	19qD2	Mus musculus vesicle transport through interaction with t-SNAREs homolog 1A (yeast) (Vti1a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]		1110014F16Rik; MVti1a; Vti1; MVti1; 1110018K19Rik; MGC102006; 4921537J05Rik; Vti1-rp2	1110014F16Rik; MVti1a; Vti1; MVti1; 1110018K19Rik; MGC102006; 4921537J05Rik; Vti1-rp2
Mus musculus	RefSeq	ILMN_189771	ILMN_189771	ZFP275	NM_031494.1	NM_031494.1		27081	13928679	NM_031494.1	Zfp275	NP_113682.1	ILMN_2464217	004610008	S	6195	TAGAGTTGTTTGTGGACTTGGCTTCTCCTCCCCTTTTTTCAGCCTTCCCC	X	+	70601812-70601861	XqA7.3	Mus musculus zinc finger protein 275 (Zfp275), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DXHXS52; DXBay20; 5430431L06Rik; AI593314; DXPas8	DXHXS52; DXBay20; 5430431L06Rik; AI593314; DXPas8
Mus musculus	RefSeq	ILMN_199014	ILMN_199014	LOC209917	XM_137006.2	XM_137006.2			38090439	XM_137006.2	LOC209917		ILMN_1241101	002490661	S	566	CTGCAAATGTTGTGGCAGAGGTGGTCACGAGAGTGAAGTGGAAGCCGCTG										
Mus musculus	RefSeq	ILMN_199477	ILMN_199477	LOC383544	XM_357115.1	XM_357115.1			38050440	XM_357115.1	LOC383544		ILMN_2535351	007100537	S	327	ATGGGTCACAGCTGCCCTGGTGATGAGTCAGAGGTCAGATATCCAGGTGG										
Mus musculus	RefSeq	ILMN_200053	ILMN_200053	LOC383182	XM_356907.1	XM_356907.1			38080074	XM_356907.1	LOC383182		ILMN_1231622	005860390	S	488	TGGTGGGGCCAAGATGTAAACTCAATGAACACCAGCAAATGGCCGGGAGC										
Mus musculus	RefSeq	ILMN_200455	ILMN_200455	LOC384301	XM_357554.1	XM_357554.1			38082018	XM_357554.1	LOC384301		ILMN_1251929	002370678	S	31	CATGGCAGGTGGGGCACTTCTACTAACTGCGACTCCAAGGAAGATTCTGC										
Mus musculus	RefSeq	ILMN_219967	ILMN_219967	C1QC	NM_007574.2	NM_007574.2		12262	113680119	NM_007574.2	C1qc	NP_031600.2	ILMN_2715840	003710170	S	589	ACATCGCATACGGCCAACCTGTGCGTGCACCTGAACCTCAACCTTGCCAG	4	-	136446132-136446181	4qD3	Mus musculus complement component 1, q subcomponent, C chain (C1qc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		Ciqc; C1qg; AI385742	Ciqc; C1qg; AI385742
Mus musculus	RefSeq	ILMN_208887	ILMN_208887	KHDRBS3	NM_010158.2	NM_010158.2		13992	117647235	NM_010158.2	Khdrbs3	NP_034288.2	ILMN_2590488	006220142	S	1001	CCGAGGAGTCCTTTCCACCCGAGGGCCAGTGAGCCGGGGAAGAGGCCTTC	15	+	68860208-68860257	15qD3	Mus musculus KH domain containing, RNA binding, signal transduction associated 3 (Khdrbs3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	Slm2; T-STAR; SLM-2; Etle	Slm2; T-STAR; SLM-2; Etle
Mus musculus	RefSeq	ILMN_198704	ILMN_198704	GM47	XM_112125.5	XM_112125.5		195726	83004682	XM_112125.5	Gm47	XP_112125.5	ILMN_2532632	001660112	S	271	ACTTTCCAGTACACTGATACTGTCGACCTCAGCCAGACTGTCCAGTACAC	X	-	158257785-158257834	XqF4	PREDICTED: Mus musculus gene model 47, (NCBI) (Gm47), mRNA.					
Mus musculus	RefSeq	ILMN_187585	ILMN_209288	GCNT3	NM_028087.2	NM_028087.2		72077	124430728	NM_028087.2	Gcnt3	NP_082363.2	ILMN_2445378	006650035	S	3916	CCCGGAAACAAAGCAAGCTGTTACACTTGGCCCACCTTCCAAGGCTTAAG	9	-	69879638-69879687	9qD	Mus musculus glucosaminyl (N-acetyl) transferase 3, mucin type (Gcnt3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R = UDP + beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R [goid 3829] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R [goid 8109] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence ISO]	2210401J11Rik; 2010013H22Rik; 2210021I22Rik	2210401J11Rik; 2010013H22Rik; 2210021I22Rik
Mus musculus	RefSeq	ILMN_217745	ILMN_217745	MTMR6	NM_144843.3	NM_144843.3		219135	118130049	NM_144843.3	Mtmr6	NP_659092.1	ILMN_2687053	001170446	S	3761	AGCATGTAAATTATTTCATGTATTATTTAAAGGCAATTAAATGTTCATGC	14	+	60921155-60921204	14qD1	Mus musculus myotubularin related protein 6 (Mtmr6), mRNA.				MGC27983; AI428804; 4022440C11Rik; AU041072	MGC27983; AI428804; 4022440C11Rik; AU041072
Mus musculus	RefSeq	ILMN_200436	ILMN_200436	LOC384287	XM_357544.1	XM_357544.1			38081920	XM_357544.1	LOC384287		ILMN_1226110	004070240	S	262	AGTCAGAACTGCCAAAGGTCTCCTCTGCTGACCTCTCAGCTGGAACTCGG										
Mus musculus	RefSeq	ILMN_206348	ILMN_239166	DYNC2H1	NM_029851.2	NM_029851.2		110350	72534791	NM_029851.2	Dync2h1	NP_084127.2	ILMN_2579445	006650025	S	397	CACCTATCAACTCCCTTTACCAAGCAGTACGACAGGTGTTTGCACCCATG	9	-	7175250-7175299	9qA1	Mus musculus dynein cytoplasmic 2 heavy chain 1 (Dync2h1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific asymmetric distribution [goid 8105] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	D330044F14Rik; AI448217; DHC1b; mKIAA1997; Dnchc2; 4432416O06Rik; DHC2; D030010H02Rik	D330044F14Rik; AI448217; DHC1b; mKIAA1997; Dnchc2; 4432416O06Rik; DHC2; D030010H02Rik
Mus musculus	RefSeq	ILMN_204141	ILMN_239166	DYNC2H1	NM_029851.2	NM_029851.2		110350	72534791	NM_029851.2	Dync2h1	NP_084127.2	ILMN_1215610	001110307	S	1720	CAGGGTTGTCTGACTCCAGGTCAGGTCTGTGTATTGAGGCTAACAGCCGA	9	-	7162907-7162926:7165599-7165628	9qA1	Mus musculus dynein cytoplasmic 2 heavy chain 1 (Dync2h1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific asymmetric distribution [goid 8105] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	D330044F14Rik; AI448217; DHC1b; mKIAA1997; Dnchc2; 4432416O06Rik; DHC2; D030010H02Rik	D330044F14Rik; AI448217; DHC1b; mKIAA1997; Dnchc2; 4432416O06Rik; DHC2; D030010H02Rik
Mus musculus	RefSeq	ILMN_202583	ILMN_239166	DYNC2H1	NM_029851.2	NM_029851.2		110350	72534791	NM_029851.2	Dync2h1	NP_084127.2	ILMN_1238984	007380026	S	12917	GGAGCGTGTGGTGACCAACATTGATGTTCCCTGTGGTGGTAACCAGGACC	9	-	6929508-6929557	9qA1	Mus musculus dynein cytoplasmic 2 heavy chain 1 (Dync2h1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific asymmetric distribution [goid 8105] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	D330044F14Rik; AI448217; DHC1b; mKIAA1997; Dnchc2; 4432416O06Rik; DHC2; D030010H02Rik	D330044F14Rik; AI448217; DHC1b; mKIAA1997; Dnchc2; 4432416O06Rik; DHC2; D030010H02Rik
Mus musculus	RefSeq	ILMN_204780	ILMN_239166	DYNC2H1	NM_029851.2	NM_029851.2		110350	72534791	NM_029851.2	Dync2h1	NP_084127.2	ILMN_1239774	006370500	S	10550	GCGCGATGCCTACTTGCCTCTGGCTGAGAGTGCCAGCAAGATGTACTTCA	9	-	7031732-7031781	9qA1	Mus musculus dynein cytoplasmic 2 heavy chain 1 (Dync2h1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific asymmetric distribution [goid 8105] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	D330044F14Rik; AI448217; DHC1b; mKIAA1997; Dnchc2; 4432416O06Rik; DHC2; D030010H02Rik	D330044F14Rik; AI448217; DHC1b; mKIAA1997; Dnchc2; 4432416O06Rik; DHC2; D030010H02Rik
Mus musculus	RefSeq	ILMN_215303	ILMN_215303	TCFAP2D	NM_153154.1	NM_153154.1		226896	23346596	NM_153154.1	Tcfap2d	NP_694794.1	ILMN_2657830	006940743	S	1488	GGAAAAACACACTACTCACAAAAACGGTGGTGCGGCAGACTCTGGCCAAG	1	+	19156156-19156205	1qA3	Mus musculus transcription factor AP-2, delta (Tcfap2d), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Tfap2d	Tfap2d
Mus musculus	RefSeq	ILMN_210531	ILMN_210531	1700020D05RIK	NM_023781.3	NM_023781.3		75555	32129257	NM_023781.3	1700020D05Rik	NP_076270.2	ILMN_2606555	003710132	S	830	CCAAGGACTGGCCCACTCAGTACTGTGAAGCTTTGGCGGATGAGCAGCGT	19	-	5502908-5502957	19qA	Mus musculus RIKEN cDNA 1700020D05 gene (1700020D05Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mage-g2	mage-g2
Mus musculus	RefSeq	ILMN_216071	ILMN_325821	LOC100047480	XM_001478241.1	XM_001478241.1		100047480	149249174	XM_001478241.1	LOC100047480	XP_001478291.1	ILMN_2666999	002470184	S	5289	AGGTAGAAAGGGCCTTGGTGTGGCGCTGAGCCATGAAGGGCTGAACTCAC					PREDICTED: Mus musculus similar to RIKEN cDNA 2610528K11 gene (LOC100047480), mRNA.					
Mus musculus	RefSeq	ILMN_212571	ILMN_212571	PRKG2	NM_008926.3	NM_008926.3		19092	142372298	NM_008926.3	Prkg2	NP_032952.2	ILMN_3160326	004040475	S	2908	CTCCAGGGCTCCTTAGACACCAGGGATCTTTACAGCATCCTTAAGTGGGG	5	-	99360530-99360579	5qE3	Mus musculus protein kinase, cGMP-dependent, type II (Prkg2), mRNA.	An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]	Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cGMP [goid 4692] [evidence IEA]	MGC130517; CGKII; Prkgr2; AW212535	MGC130517; CGKII; Prkgr2; AW212535
Mus musculus	RefSeq	ILMN_216089	ILMN_216089	5330431N19RIK	NM_172639.2	NM_172639.2		226162	142363411	NM_172639.2	5330431N19Rik	NP_766227.1	ILMN_1237049	003290743	S	480	CCTCTAGAGGATTCTGCGTTGAGCTTTGCGCACGCCAACTGCACCCTGAT	19	+	45641935-45641984	19qC3	Mus musculus RIKEN cDNA 5330431N19 gene (5330431N19Rik), mRNA.					
Mus musculus	MEEBO	ILMN_215180	ILMN_215180	BC035947	scl00269211.2_261	NM_178117.2			31342433	NM_178117.2	BC035947		ILMN_2726962	001070138	S	202	CTACCCGGAGGACTCCTTTCGCAGGATTTGTGGTACTGCTACCGACTGGG										
Mus musculus	MEEBO	ILMN_215180	ILMN_215180	BC035947	scl00269211.2_261	NM_178117.2			31342433	NM_178117.2	BC035947		ILMN_1217246	005870196	S	2926	CTCGCACCCCTAACCCTTTGCTTCTTAAAAAACCCCTAGCTTCCGAGCCT										
Mus musculus	MEEBO	ILMN_215180	ILMN_215180	BC035947	scl00269211.2_261	NM_178117.2			31342433	NM_178117.2	BC035947		ILMN_2726961	007150576	S	201	TCTACCCGGAGGACTCCTTTCGCAGGATTTGTGGTACTGCTACCGACTGG										
Mus musculus	RefSeq	ILMN_209129	ILMN_209129	CDC42EP5	NM_021454.3	NM_021454.3		58804	32129278	NM_021454.3	Cdc42ep5	NP_067429.1	ILMN_2592823	002140022	S	721	AGAGTGCAGCACCCCAAGACCCGCTGCTGCTCAAATGCTGACCTCCAGCT	7	-	4102958-4103007	7qA1	Mus musculus CDC42 effector protein (Rho GTPase binding) 5 (Cdc42ep5), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CEP5; Borg3; 1700027J19Rik; 2010007O02Rik; MGC117885; C85526	CEP5; Borg3; 1700027J19Rik; 2010007O02Rik; MGC117885; C85526
Mus musculus	RefSeq	ILMN_202029	ILMN_209129	CDC42EP5	NM_021454.3	NM_021454.3		58804	32129278	NM_021454.3	Cdc42ep5	NP_067429.1	ILMN_2546494	005220288	S	444	GTGCAATGTGTGCCTGAAGTCTCCGAGGGGTGCTGAGATCGAGAGTGCTC	7	-	4103235-4103284	7qA1	Mus musculus CDC42 effector protein (Rho GTPase binding) 5 (Cdc42ep5), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CEP5; Borg3; 1700027J19Rik; 2010007O02Rik; MGC117885; C85526	CEP5; Borg3; 1700027J19Rik; 2010007O02Rik; MGC117885; C85526
Mus musculus	RefSeq	ILMN_199903	ILMN_199903	LOC384049	XM_357388.1	XM_357388.1			38078844	XM_357388.1	LOC384049		ILMN_1236060	001300170	S	864	GTACACAGATTACCAAGACGAGGGTTACCAGGGCTATCAGGACGACGGCC										
Mus musculus	RefSeq	ILMN_215752	ILMN_215752	STBD1	NM_175096.3	NM_175096.3		52331	142386655	NM_175096.3	Stbd1	NP_780305.1	ILMN_2663211	001430129	S	1686	GGTGGTTTGAAGGGCTCCTTGAGGACTGGGAGTAACAGGTCTGAGTCTGG	5	+	93035306-93035355	5qE2	Mus musculus starch binding domain 1 (Stbd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	D5Ertd593e; MGC148232; MGC148231; D530019K15Rik	D5Ertd593e; MGC148232; MGC148231; D530019K15Rik
Mus musculus	RefSeq	ILMN_221271	ILMN_221271	TCFL5	NM_178254.2	NM_178254.2		277353	31342352	NM_178254.2	Tcfl5	NP_839985.1	ILMN_2972794	005900142	S	1459	GGGATGCGGCTCCAGTTGTAGGGACTCCAGTAAGGACGTTGAGAGCACAT	2	-	180357154-180357203	2qH4	Mus musculus transcription factor-like 5 (basic helix-loop-helix) (Tcfl5), mRNA.	The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MGC118431; AV260129; Figlb	MGC118431; AV260129; Figlb
Mus musculus	RefSeq	ILMN_200735	ILMN_200735	LOC381839	XM_355852.1	XM_355852.1			38085710	XM_355852.1	LOC381839		ILMN_1213128	006040220	S	2123	CCCTATTCCAATGTGTTCTGTGTGCTATCTGGCTAGAAGTTTCTCCTCCC										
Mus musculus	RefSeq	ILMN_216047	ILMN_229967	CUL7	NM_025611.5	NM_025611.5		66515	58761521	NM_025611.5	Cul7	NP_079887.3	ILMN_2666690	005260309	S	5421	TGCACTGATAACCACACCTTCTCCACTTTCCGGTAGCCCTGGATATGGGG	17	+	46801205-46801240:46801241-46801254	17qC	Mus musculus cullin 7 (Cul7), mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IC ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence NAS]; Any process that modulates the frequency, rate or extent of endothelial cell differentiation [goid 45601] [evidence NAS]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2510004L20Rik; p193; AA409809; p185; C230011P08Rik	2510004L20Rik; p193; AA409809; p185; C230011P08Rik
Mus musculus	RefSeq	ILMN_218184	ILMN_218184	PLA2G7	NM_013737.2	NM_013737.2		27226	31980751	NM_013737.2	Pla2g7	NP_038765.2	ILMN_2692696	004120255	S	1671	CAGGATCACAGACCCAGAATTAGAAGAACTTGCTTGTTACACAGTTGCCT	17	+	43075008-43075030:43075031-43075057	17qB3	Mus musculus phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) (Pla2g7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; An enzyme complex composed of two catalytic alpha subunits, which form a catalytic dimer, and a non-catalytic, regulatory beta subunit; the catalytic dimer may be an alpha1/alpha1 or alpha2/alpha2 homodimer, or an alpha1/alpha2 heterodimer. Modulates the action of platelet-activating factor (PAF) [goid 8247] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]	R75400	R75400
Mus musculus	RefSeq	ILMN_208885	ILMN_208885	POLQ	NM_029977.1	NM_029977.1		77782	30387614	NM_029977.1	Polq	NP_084253.1	ILMN_2702683	006450139	S	7941	CTATGAATTTGCCTTTCATAATTTATTGGAGTGTTAAACAGTCTCAGAAT	16	+	37094892-37094941	16qB3	Mus musculus polymerase (DNA directed), theta (Polq), mRNA.		The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	A430110D14Rik	A430110D14Rik
Mus musculus	RefSeq	ILMN_208885	ILMN_208885	POLQ	NM_029977.1	NM_029977.1		77782	30387614	NM_029977.1	Polq	NP_084253.1	ILMN_2590482	000670598	S	7002	GTCTCGTGACTGTCGTCTCATTCAAGTCTTAAATACGGGAGCGGATGTGT	16	+	37086652-37086701	16qB3	Mus musculus polymerase (DNA directed), theta (Polq), mRNA.		The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	A430110D14Rik	A430110D14Rik
Mus musculus	RefSeq	ILMN_208885	ILMN_208885	POLQ	NM_029977.1	NM_029977.1		77782	30387614	NM_029977.1	Polq	NP_084253.1	ILMN_2590478	003710241	S	6995	TCACTTGTCTCGTGACTGTCGTCTCATTCAAGTCTTAAATACGGGAGCGG	16	+	37086645-37086694	16qB3	Mus musculus polymerase (DNA directed), theta (Polq), mRNA.		The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	A430110D14Rik	A430110D14Rik
Mus musculus	RefSeq	ILMN_201537	ILMN_201537	RPL10A	NM_011287.1	NM_011287.1		19896	6755349	NM_011287.1	Rpl10a	NP_035417.1	ILMN_2902115	005960259	S	474	GACAATCAAGTTCCAGATGAAGAAGGTGCTGTGTTTGGCCGTCGCTGTTG	17	+	28462677-28462701:28462834-28462858	17qA3.3	Mus musculus ribosomal protein L10A (Rpl10a), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nedd6; CsA-19	Nedd6; CsA-19
Mus musculus	MEEBO	ILMN_212956	ILMN_212956	AI844366	scl37169.1_27				51092271	NM_177906	AI844366		ILMN_2684008	004390504	S	2438	GCATGTCCCTAAAAGCCAGAGCCCCAGGTGACTTTTGTCTAAAGCTGGAG										
Mus musculus	MEEBO	ILMN_212956	ILMN_212956	AI844366	scl37169.1_27				51092271	NM_177906	AI844366		ILMN_2684007	001660161	S	2437	CGCATGTCCCTAAAAGCCAGAGCCCCAGGTGACTTTTGTCTAAAGCTGGA										
Mus musculus	RefSeq	ILMN_200385	ILMN_200385	LOC386385	XM_359197.1	XM_359197.1			38081491	XM_359197.1	LOC386385		ILMN_1256276	004780433	S	86	CCCACCTCTTAAGTGACTTGTCATGGCCGCGTAAAGAAGAAGCAACACAG										
Mus musculus	Riken	ILMN_204499	ILMN_204499	GRIK1	ri|B230343B15|PX00160C17|AK046122|3614					AK046122	Grik1		ILMN_1246714	004830189	S	3485	ACATGCAGAAGTCTGGCAGTGGCGACACACACCTTTGGTCCCAGCGCTTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex [goid 8328] [evidence IC ]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity [goid 48172] [evidence TAS]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid [goid 14054] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32230] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA];  [goid 15277] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 15277] [evidence IGI];  [goid 15277] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211753	ILMN_211753	MYCN	NM_008709.2	NM_008709.2		18109	31543327	NM_008709.2	Mycn	NP_032735.2	ILMN_2619172	003710035	S	2230	TATTACTTTATCACTTTTTGAACTAAGAAACTTTTGTAAAGAAATTTTAC	12	-	12943087-12943136	12qA1.1	Mus musculus v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) (Mycn), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Nmyc-1; c-nmyc; Nmyc; Nmyc1; N-myc	Nmyc-1; c-nmyc; Nmyc; Nmyc1; N-myc
Mus musculus	Riken	ILMN_203937	ILMN_203937	A130084F23RIK	ri|A130084F23|PX00126A03|AK038175|3002					AK038175	A130084F23Rik		ILMN_1245266	006400523	S	2821	GCTCCTTGGACAAGCAAGATGGCTCAACAGGTAAAGGTGCACTTGGCTCC										
Mus musculus	MEEBO	ILMN_186568	ILMN_186568	MTDNA_ATP8	mtDNA_ATP8						mtDNA_ATP8		ILMN_2436634	005560465	S	20	TCTTATTTCAACTAAAAGTCTCATCACAAACATTCCCACTGGCACCTTCA										
Mus musculus	Riken	ILMN_204334	ILMN_204334	HMG20A	ri|6720452M21|PX00059E10|AK032790|3195					AK032790	Hmg20a		ILMN_1245313	000240372	S	2815	GTCAGATGCCTGTAGTTCTCCTCAGGCCGATCCCTGGTATAGCTTTGTCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222421	ILMN_222421	9630041N07RIK	NM_173387.2	NM_173387.2		214779	141802593	NM_173387.2	9630041N07Rik	NP_775563.1	ILMN_2749383	005090603	S	2017	GGGGCTGAGCATGAAGTTAGATTTCAGCAAACATCAGGCATTTGTGATGC	11	-	50645878-50645927	11qB1.3	Mus musculus RIKEN cDNA 9630041N07 gene (9630041N07Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RP23-292E3.2	RP23-292E3.2
Mus musculus	RefSeq	ILMN_210835	ILMN_210835	BRD4	NM_198094.1	NM_198094.1		57261	37674286	NM_198094.1	Brd4	NP_932762.1	ILMN_2609690	006590730	S	2424	CGGACTCTTAATAAAACGGTCTTCAGTTCCAGATTCCTTCCCAGCGAGCT	17	-	32343867-32343916	17qB1	Mus musculus bromodomain containing 4 (Brd4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IPI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Brd5; WI-11513; HUNK1; MCAP	Brd5; WI-11513; HUNK1; MCAP
Mus musculus	RefSeq	ILMN_224386	ILMN_224386	EG654465	NM_001039125.1	NM_001039125.1		654465	84993779	NM_001039125.1	EG654465	NP_001034214.1	ILMN_3161487	004890301	S	174	GTGTTGTAGGAAGTGGTGGGTGTTTGAACCCTACCCAACACCCGTTCCCA	14	+	63619837-63619886	14qD1	Mus musculus predicted gene, EG654465 (EG654465), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defb41	Defb41
Mus musculus	RefSeq	ILMN_211233	ILMN_211233	ZFP654	NM_028059.2	NM_028059.2		72020	67972643	NM_028059.2	Zfp654	NP_082335.1	ILMN_2634157	007210255	S	1980	GCAGAGGAGATGTGCCGGCTTAGACTCCAAAAGGGTTATAAAACTCCCAA	16	-	64782888-64782937	16qC1.3	Mus musculus zinc finger protein 654 (Zfp654), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1600021C16Rik; 1810008K20Rik	1600021C16Rik; 1810008K20Rik
Mus musculus	RefSeq	ILMN_211233	ILMN_211233	ZFP654	NM_028059.2	NM_028059.2		72020	67972643	NM_028059.2	Zfp654	NP_082335.1	ILMN_2613851	000050181	S	1985	GGAGATGTGCCGGCTTAGACTCCAAAAGGGTTATAAAACTCCCAAAGTAC	16	-	64782883-64782932	16qC1.3	Mus musculus zinc finger protein 654 (Zfp654), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1600021C16Rik; 1810008K20Rik	1600021C16Rik; 1810008K20Rik
Mus musculus	Riken	ILMN_206605	ILMN_206605	E030043F19RIK	ri|E030043F19|PX00206F09|AK087310|1815					AK087310	E030043F19Rik		ILMN_1233785	002350255	S	1723	TCCCTGTAGTAGCATCCCCATCCTCCAACACAGAGCAGTCTGGCACAGTA										
Mus musculus	MEEBO	ILMN_214583	ILMN_214583	IL17RD	scl46534.17_589	NM_134437.1			24025661	NM_134437.1	Il17rd		ILMN_1218196	003870537	S	3155	AGTGTACGGGAGACGGTGGCCAGTTAATCTGCTGGTTTTGACAAGTGACA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223019	ILMN_223019	DNAJB8	NM_019964.1	NM_019964.1		56691	9910415	NM_019964.1	Dnajb8	NP_064348.1	ILMN_1238080	004150053	S	690	CCGCTCCACCTTTTCATCTGCTTCGTTTGGTGGCTCTGGCAGCTCAGGGT	6	+	88172951-88173000	6qD1	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 8 (Dnajb8), mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	mDj6; 1700031F10Rik; 1700016F14Rik; AI326313	mDj6; 1700031F10Rik; 1700016F14Rik; AI326313
Mus musculus	RefSeq	ILMN_186640	ILMN_223019	DNAJB8	NM_019964.1	NM_019964.1		56691	9910415	NM_019964.1	Dnajb8	NP_064348.1	ILMN_1255087	002190376	S	697	TGGAGCGGCTGCCCCCACCATGGCCCAGAGTATTGAAAGATGACAAGGCT	6	+	88172958-88173007	6qD1	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 8 (Dnajb8), mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	mDj6; 1700031F10Rik; 1700016F14Rik; AI326313	mDj6; 1700031F10Rik; 1700016F14Rik; AI326313
Mus musculus	RefSeq	ILMN_211667	ILMN_211667	MARCH2	NM_145486.2	NM_145486.2		224703	31542052	NM_145486.2	March2	NP_663461.2	ILMN_1236993	002490630	S	803	GACAAATCAGAAAGTCCGCCTGAAGATTCGGGAAGCAGATGGCTCCGAGG	17	-	33298746-33298795	17qB1	Mus musculus membrane-associated ring finger (C3HC4) 2 (March2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC7259; 9530046H09Rik	MGC7259; 9530046H09Rik
Mus musculus	Riken	ILMN_202979	ILMN_202979	5830420C15RIK	ri|5830420C15|PX00039I18|AK030841|2933					AK030841	5830420C15Rik		ILMN_1241237	002850411	S	2720	TACACCGTAGCTCAGGATGGCCTTGACTTCACAATCCTTCAGGCTCAGTC										
Mus musculus	RefSeq	ILMN_223703	ILMN_223703	CAPZA1	NM_009797.1	NM_009797.1		12340	33468886	NM_009797.1	Capza1	NP_033927.1	ILMN_2921526	003360471	S	1424	GTTGGGAGGCAAAGTTTCCTGGAAATTCCATGGCAGCAGCTTCTCTAGGG	3	-	104627305-104627354	3qF2.2	Mus musculus capping protein (actin filament) muscle Z-line, alpha 1 (Capza1), mRNA.	A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Cappa1; CAPZ; CAZ1	Cappa1; CAPZ; CAZ1
Mus musculus	Riken	ILMN_202510	ILMN_202510	SLC26A2	ri|1700120D08|ZX00078C15|AK007212|1100					AK007212	Slc26a2		ILMN_2550164	004280670	S	387	GAGCAGCAGTGATTGGAAGTGAACCATCTGTCTCCTGAAATGTCTTCAGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198241	ILMN_198241	LOC381122	XM_355038.1	XM_355038.1			38083244	XM_355038.1	LOC381122		ILMN_1249954	006550450	S	2628	CAGGAAGCCTCTGGGGTGGGAATGGGTATAAGAACCAAGGAGCAGAGACG										
Mus musculus	RefSeq	ILMN_200869	ILMN_200869	LOC384621	XM_357751.1	XM_357751.1			38086676	XM_357751.1	LOC384621		ILMN_2540291	002030768	S	337	GGTGATGAAGCTGGCTCCTTGTCCCACAGAAACCCTCAGAATGAGCTGCA										
Mus musculus	RefSeq	ILMN_199244	ILMN_199244	LOC331330	XM_285622.2	XM_285622.2			38093396	XM_285622.2	LOC331330		ILMN_1229903	007560239	S	263	CGACACTGATGCTGTGTGAAAAGGACAGCAGAAGCACTAAAGGCTTTCCC										
Mus musculus	RefSeq	ILMN_256714	ILMN_256714	IRX2	NM_010574.2	NM_010574.2		16372	47059033	NM_010574.2	Irx2	NP_034704.1	ILMN_3040515	000010068	I	65	CCCCGCGCCCCGCGCCCACCATGTCCTACCCGCAGGGCTACCTGTACCAA	13	+	72766490-72766509:72766510-72766539	13qC1	Mus musculus Iroquois related homeobox 2 (Drosophila) (Irx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC103290; IRX6	MGC103290; IRX6
Mus musculus	RefSeq	ILMN_256714	ILMN_256714	IRX2	NM_010574.2	NM_010574.2		16372	47059033	NM_010574.2	Irx2	NP_034704.1	ILMN_3115213	002970008	A	2187	CAGCGGTAGCCCTGGTTCCTGCCCCAAAGGTGGTCCTACCTCACCTTTTA	13	+	72771366-72771415	13qC1	Mus musculus Iroquois related homeobox 2 (Drosophila) (Irx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC103290; IRX6	MGC103290; IRX6
Mus musculus	Riken	ILMN_207069	ILMN_207069	6430590A07RIK	ri|6430590A07|PX00648P14|AK078307|1035					AK078307	6430590A07Rik		ILMN_2584805	004900021	S	570	GCCATTGCCTTAATTGTCATTGCCCTGGGCACGAGTGTATCTGCTGGGAA										
Mus musculus	RefSeq	ILMN_198579	ILMN_310281	LOC100039276	XM_001472597.1	XM_001472597.1		100039276	149271632	XM_001472597.1	LOC100039276	XP_001472647.1	ILMN_1242237	006860358	S	1174	TCACATGTCACTGCACACCTAGTAAGACACACCCAAGAGAGACCATTCAT	X	-	53531270-53531319	XqA5	PREDICTED: Mus musculus similar to ZFP206 (LOC100039276), mRNA.					
Mus musculus	RefSeq	ILMN_188191	ILMN_188191	VNN3	NM_011979.1	NM_011979.1		26464	6755980	NM_011979.1	Vnn3	NP_036109.2	ILMN_1244479	002510066	S	1	CGTCTGAGGAGTCGAGGTGGAGCCCCTTTGCCTATCTTAGTGATGGCCCT	10	+	23571278-23571327	10qA4	Mus musculus vanin 3 (Vnn3), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving pantothenate, the anion of pantothenic acid, the amide of beta-alanine and pantoic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods [goid 15939] [evidence IDA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + 2-aminoethanethiol [goid 17159] [evidence IDA]	MGC124285	MGC124285
Mus musculus	RefSeq	ILMN_188191	ILMN_188191	VNN3	NM_011979.1	NM_011979.1		26464	6755980	NM_011979.1	Vnn3	NP_036109.2	ILMN_2491202	002600470	S	1503	GTCTGAGGAGTCGAGGTGGAGCCCCTTTGCCTATCTTAGTGATGGCCCTG	10	+	23589351-23589400	10qA4	Mus musculus vanin 3 (Vnn3), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving pantothenate, the anion of pantothenic acid, the amide of beta-alanine and pantoic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods [goid 15939] [evidence IDA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + 2-aminoethanethiol [goid 17159] [evidence IDA]	MGC124285	MGC124285
Mus musculus	RefSeq	ILMN_224815	ILMN_224815	HAGHL	NM_026897.1	NM_026897.1		68977	21312166	NM_026897.1	Haghl	NP_081173.1	ILMN_2859254	002190537	S	854	ACTGTGCCTTCGACGCTGGGCGAGGAGCTCATGTACAACCCTTTCCTGAG	17	-	25511107-25511156	17qA3.3	Mus musculus hydroxyacylglutathione hydrolase-like (Haghl), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC101974; 2810014I23Rik; 1500017E18Rik; AI844861; C330022E15Rik	MGC101974; 2810014I23Rik; 1500017E18Rik; AI844861; C330022E15Rik
Mus musculus	MEEBO	ILMN_209286	ILMN_209286	A830029E22RIK	scl23064.1.45_7				51708176	XM_489006	A830029E22Rik		ILMN_1239802	001470246	S	387	TAGGATGTGTAAGAATTGCCTAAAACACTGCTGGAAACTTCCCTAAGGCT										
Mus musculus	RefSeq	ILMN_213493	ILMN_213493	CD164	NM_016898.2	NM_016898.2		53599	118130821	NM_016898.2	Cd164	NP_058594.1	ILMN_1246611	000130228	S	2702	CCTTTGCCATACTTGCTGCACAAGCAGACACTGCTGGACTTAGAAGTTTC	10	+	41250720-41250769	10qB2	Mus musculus CD164 antigen (Cd164), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISO]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence ISO]		A115; MSSP; AA589639; MGC-24; A24; AW540279	A115; MSSP; AA589639; MGC-24; A24; AW540279
Mus musculus	MEEBO	ILMN_213216	ILMN_213216	GREM1	scl18860.2_108	NM_011824.1			6754067	NM_011824.1	Grem1		ILMN_1228522	001450445	S	1071	GACATCTCAGTCGTAGCCCATGTTCCTAAATTAATTCACTTGACCGCGGG						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IGI]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208821	ILMN_208821	DUOXA2	NM_025777.2	NM_025777.2		66811	142368810	NM_025777.2	Duoxa2	NP_080053.1	ILMN_2589859	001850411	S	1226	GGGGGCACCCCATGTGCCTTTGCTCTAGAGAATGGATTTCTCAGGAGAAC	2	+	122128255-122128304	2qE5	Mus musculus dual oxidase maturation factor 2 (Duoxa2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		RP23-173H17.3; 9030623N16Rik	RP23-173H17.3; 9030623N16Rik
Mus musculus	RefSeq	ILMN_201176	ILMN_233943	LOC436054	XR_003840.1	XR_003840.1		436054	94385376	XR_003840.1	LOC436054		ILMN_2541360	003400671	S	553	CCTATCCCAGGCTCGTTGTCCGCTAGCTCAAGCCTTTCTTAGTTCCCTTC				8qD1	PREDICTED: Mus musculus similar to Thymidine kinase, cytosolic (LOC436054), mRNA.					
Mus musculus	RefSeq	ILMN_196837	ILMN_244018	MYO5C	XM_900611.2	XM_900611.2		208943	94386229	XM_900611.2	Myo5c	XP_905704.1	ILMN_1236641	005080142	S	4619	AACCATAAGTTGGGACATCCCCGGGGCGTCTACAGGAGCTGGAACTGTGC	9	+	75073344-75073393	9qD	PREDICTED: Mus musculus myosin VC, transcript variant 4 (Myo5c), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198461	ILMN_259593	BC048546	NM_001001179.2	NM_001001179.2		232400	142375259	NM_001001179.2	BC048546	NP_001001179.1	ILMN_2531773	005360048	S	4196	GTGAAGATGCTCTCTGGCTTTACTCCTGTCGTCTCATCCACCGAGGAGCT	6	-	128492919-128492921:128493269-128493315	6qF3	Mus musculus cDNA sequence BC048546 (BC048546), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 17114] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC58520	MGC58520
Mus musculus	MEEBO	ILMN_211302	ILMN_211302	PRRX1	scl018933.1_11	NM_011127.1			6755115	NM_011127.1	Prrx1		ILMN_2614463	003710195	S	482	GCGGACACATTACCCGGATGCTTTTGTTCGAGAAGATCTCGCACGTCGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IGI]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190997	ILMN_190997	WASF2	scl24869.10_287				31560842	NM_153423	Wasf2		ILMN_1235619	005490731	S	1	GTACTCCCAATAACCTGAAGATTCCATGTAACTCTTATGTACGCGCATGA						Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISA]	Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cell wall [goid 5199] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195465	ILMN_195465	V1RB1	NM_053225.1	NM_053225.1		113852	16716532	NM_053225.1	V1rb1	NP_444455.1	ILMN_2902392	002810037	S	548	GCATACTTTCCACAATGATGACCATGAGGGAAGCCTTTCTCATCGGACTC	6	+	90057816-90057865	6qD1	Mus musculus vomeronasal 1 receptor, B1 (V1rb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]	V1RA5; VN2; MGC130072	V1RA5; VN2; MGC130072
Mus musculus	RefSeq	ILMN_201038	ILMN_201038	LOC384724	XM_357820.1	XM_357820.1			38088105	XM_357820.1	LOC384724		ILMN_2540869	004040692	S	361	GGAGTGCTGAGGGAGCTTGGCGTGGGTAGGAGTACCATTGAGGATCGCAT										
Mus musculus	RefSeq	ILMN_196680	ILMN_258364	CNGA4	NM_001033317.3	NM_001033317.3		233649	146198728	NM_001033317.3	Cnga4	NP_001028489.1	ILMN_1222098	002060692	S	1498	ACAGGCCCAGGCAGTCATGGAGGAGAAGGGCCGTGAAATCTTGCTCAAAA				7qE3	Mus musculus cyclic nucleotide gated channel alpha 4 (Cnga4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence TAS]	MGC130316	MGC130316
Mus musculus	RefSeq	ILMN_221935	ILMN_221935	TMEM59	NM_029565.2	NM_029565.2		56374	31981330	NM_029565.2	Tmem59	NP_083841.3	ILMN_1236917	004850736	S	898	GCTGAGCAGATACCCAGCTCCTTCTCTTGTGATTGTTAGGTCTCAGACTG	4	+	106873017-106873066	4qC7	Mus musculus transmembrane protein 59 (Tmem59), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI256529; 3110046P06Rik; D4Ertd20e; 1110001M20Rik; MTDCF1; ORF18	AI256529; 3110046P06Rik; D4Ertd20e; 1110001M20Rik; MTDCF1; ORF18
Mus musculus	Riken	ILMN_204311	ILMN_204311	SH3D4	ri|4930484D16|PX00032F10|AK029703|2417					AK029703	Sh3d4		ILMN_2564003	002030242	S	2268	GCAGCAATGTGACGATGGCTGGTTTGTGGGTATGTAGCCTGTGGAGGGAG										
Mus musculus	RefSeq	ILMN_200305	ILMN_200305	LOC386185	XM_359109.1	XM_359109.1			38081268	XM_359109.1	LOC386185		ILMN_2538297	003830341	S	889	GGGCCAAATATGGATCAGAGACTGAAGGAATTGCCGACCAGTGACCAGCC										
Mus musculus	RefSeq	ILMN_223219	ILMN_219753	DOCK6	NM_177030.3	NM_177030.3		319899	124301207	NM_177030.3	Dock6	NP_796004.2	ILMN_2760963	001230102	S	6460	CGAGTCGAAGTCCTAGGAGATGAGCCCCCTGTCTGTCTGCACTGATGGAT	9	-	21604674-21604723	9qA3	Mus musculus dedicator of cytokinesis 6 (Dock6), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	2410095B20Rik; 4931431C02Rik; mKIAA1395; C330023D02Rik	2410095B20Rik; 4931431C02Rik; mKIAA1395; C330023D02Rik
Mus musculus	RefSeq	ILMN_219753	ILMN_219753	DOCK6	NM_177030.3	NM_177030.3		319899	124301207	NM_177030.3	Dock6	NP_796004.2	ILMN_2947994	001260280	S	2770	GCTCACACTCCTGGGTGAATTCTGCTTATGCTCCGGGAGGCAGCAAGGCT	9	-	21633962-21634011	9qA3	Mus musculus dedicator of cytokinesis 6 (Dock6), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	2410095B20Rik; 4931431C02Rik; mKIAA1395; C330023D02Rik	2410095B20Rik; 4931431C02Rik; mKIAA1395; C330023D02Rik
Mus musculus	RefSeq	ILMN_219215	ILMN_219215	4930432H15RIK	NM_028671.1	NM_028671.1		73866	21312033	NM_028671.1	4930432H15Rik	NP_082947.1	ILMN_2705784	003830148	S	692	CCAACGAGGCCATATCGGCAAGCTACTGACTGTCTCGGGCTTGATTCTAG	X	+	49572660-49572709	XqA5	Mus musculus RIKEN cDNA 4930432H15 gene (4930432H15Rik), mRNA.				4930527G05Rik	4930527G05Rik
Mus musculus	RefSeq	ILMN_214252	ILMN_214252	TFF3	NM_011575.1	NM_011575.1		21786	6755772	NM_011575.1	Tff3	NP_035705.1	ILMN_2645973	000160170	S	389	AGGAGCCAGGAGTCCTGAAGAATAAAGACCTCACAGCCAACACAAGGCTG	17	-	31262270-31262319	17qA3.3	Mus musculus trefoil factor 3, intestinal (Tff3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]			mITF; ITF	mITF; ITF
Mus musculus	RefSeq	ILMN_201451	ILMN_242996	LOC673571	XM_001005871.1	XM_001005871.1		673571	94420329	XM_001005871.1	LOC673571	XP_001005871.1	ILMN_1242433	002650575	S	40	GACCTCCAAGGTATTGCCTTCTGGGGCAATGGTTGTGCCCTGCCAGACAA					PREDICTED: Mus musculus similar to Anionic trypsin II precursor (Pretrypsinogen II) (LOC673571), mRNA.					
Mus musculus	RefSeq	ILMN_242282	ILMN_242282	OTTMUSG00000011595	NR_002688.1	NR_002688.1		433406	84579876	NR_002688.1	OTTMUSG00000011595		ILMN_3009783	006840273	S	2400	ACGAGAGCTTCAACATCTAAATAAATGATGAAACGCATTCGTCACTGAGG	2	+	19916292-19916341	2qA3	Mus musculus predicted gene, OTTMUSG00000011595 (OTTMUSG00000011595), non-coding RNA. XR_000457 XR_000458 XR_000459					
Mus musculus	Riken	ILMN_203699	ILMN_203699	9630028D01RIK	ri|9630028D01|PX00115D14|AK036030|3833					AK036030	9630028D01Rik		ILMN_1216968	002470767	S	3551	ATGGCCGTGGAGAAGGATGGGTCCTGGCAGATGAGCAGGCACTGGAGCTA										
Mus musculus	Riken	ILMN_206332	ILMN_206332	D330041F21RIK	ri|D330041F21|PX00192B15|AK084777|2546					AK084777	D330041F21Rik		ILMN_1227673	004200685	S	2200	TCTACACAGAGTGGCCATTTCATAAGTACCCACACACACAGCGGGCAACC										
Mus musculus	RefSeq	ILMN_232139	ILMN_232139	SSBP4	NM_133772.1	NM_133772.1		76900	19526995	NM_133772.1	Ssbp4	NP_598533.1	ILMN_2900827	004760458	S	1271	CGGCCGGCAGGGCCCCCACGAAGGACTTTTGTCATTTTCTAAACACACAT	8	-	73121502-73121551	8qB3.3	Mus musculus single stranded DNA binding protein 4 (Ssbp4), mRNA.				Sspb4; 1210002E11Rik; AW743380	Sspb4; 1210002E11Rik; AW743380
Mus musculus	RefSeq	ILMN_215975	ILMN_215975	OVCH2	NM_172908.3	NM_172908.3		244199	133892770	NM_172908.3	Ovch2	NP_766496.2	ILMN_2665916	000460519	S	1663	GATGAATCAGTGCCTCTGGAGACATGGGACCTACCACCTGGAGCAATGGA	7	-	114925491-114925540	7qE3	Mus musculus ovochymase 2 (Ovch2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Ovtn; 9230106D23Rik	Ovtn; 9230106D23Rik
Mus musculus	RefSeq	ILMN_221350	ILMN_221350	DBR1	NM_031403.3	NM_031403.3		83703	142377002	NM_031403.3	Dbr1	NP_113580.2	ILMN_1254380	003610162	S	1743	TCTACGCTGCAGTGGATGATGGGGATGCTAGTGCCGAGTGAGACAGAGGC	9	+	99484402-99484442:99484443-99484451	9qE3.3	Mus musculus debranching enzyme homolog 1 (S. cerevisiae) (Dbr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	 [goid 8419] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	AW018415	AW018415
Mus musculus	RefSeq	ILMN_189125	ILMN_189125	V1RF4	NM_134201.1	NM_134201.1		171235	21717716	NM_134201.1	V1rf4	NP_598962.1	ILMN_2458586	002510253	S	863	CTCTCCTTTATAATCCCAAATGGTCTCTGGTGAATATTACTGCAATGTCC	17	+	21424448-21424497	17qA3.2	Mus musculus vomeronasal 1 receptor, F4 (V1rf4), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	MGC159164; MGC159162	MGC159164; MGC159162
Mus musculus	RefSeq	ILMN_221584	ILMN_221584	OLFR473	NM_146775.1	NM_146775.1		258771	22129300	NM_146775.1	Olfr473	NP_666986.1	ILMN_1219139	003450554	S	662	TTCTTATTACCATCCTGAATATGCGCTCCACCGAGGGTCGCCACAAGGCC	7	+	115077697-115077746	7qE3	Mus musculus olfactory receptor 473 (Olfr473), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-4	MOR204-4
Mus musculus	RefSeq	ILMN_209593	ILMN_209593	1700012P22RIK	XM_131817.3	XM_131817.3		69364	94372727	XM_131817.3	1700012P22Rik	XP_131817.2	ILMN_1229341	000240377	S	636	GACTAGCCTGAAAGAGAGCATTTATACTACATCCTACCCCAGGCTGCCGG	4	-	144008380-144008429	4qE1	PREDICTED: Mus musculus RIKEN cDNA 1700012P22 gene (1700012P22Rik), mRNA.					
Mus musculus	MEEBO	ILMN_192981	ILMN_192981	SCL0001912.1_11	scl0001912.1_11	AK052220.1			26095067	AK052220.1	scl0001912.1_11		ILMN_2493114	002470593	S	5	CCAAAGTCGTGGAACCAAAAATTAAAGTCATTCAAGGCAGTCTTCAGCCT										
Mus musculus	RefSeq	ILMN_217703	ILMN_238692	LEMD1	NM_001033250.3	NM_001033250.3		213409	115311552	NM_001033250.3	Lemd1	NP_001028422.2	ILMN_1242627	001510056	S	581	GCGGCGTCTGCTGTGTCCCGACCTTTAACAGGAACCTTAGAGCTGTGCAG	1	+	134153614-134153663	1qE4	Mus musculus LEM domain containing 1 (Lemd1), mRNA. XM_923261 XM_923269 XM_923274	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI428128; LEMP-1; 4930540I23Rik	AI428128; LEMP-1; 4930540I23Rik
Mus musculus	RefSeq	ILMN_192048	ILMN_185191	TNRC6A	NM_144925.3	NM_144925.3		233833	117190551	NM_144925.3	Tnrc6a	NP_659174.3	ILMN_1257477	001070110	S	639	CCTCAGCCTGCCAACTCTGATAACGGCACTTCCACAGCAACCAGCACTAA	7	+	130306040-130306089	7qF3	Mus musculus trinucleotide repeat containing 6a (Tnrc6a), mRNA.				GW182; D130023A07Rik; MGC11932; 2010321I05Rik; CAGH26; Tnrc6; 3110054G10Rik; AW557223	GW182; D130023A07Rik; MGC11932; 2010321I05Rik; CAGH26; Tnrc6; 3110054G10Rik; AW557223
Mus musculus	RefSeq	ILMN_185191	ILMN_185191	TNRC6A	NM_144925.3	NM_144925.3		233833	117190551	NM_144925.3	Tnrc6a	NP_659174.3	ILMN_2440997	000540239	S	6796	GGCCCTGCACTTTGAACAGGCTTTCCATGTTGTTTTGAAGGTTCCCACGG	7	+	130337127-130337176	7qF3	Mus musculus trinucleotide repeat containing 6a (Tnrc6a), mRNA.				GW182; D130023A07Rik; MGC11932; 2010321I05Rik; CAGH26; Tnrc6; 3110054G10Rik; AW557223	GW182; D130023A07Rik; MGC11932; 2010321I05Rik; CAGH26; Tnrc6; 3110054G10Rik; AW557223
Mus musculus	RefSeq	ILMN_185191	ILMN_185191	TNRC6A	NM_144925.3	NM_144925.3		233833	117190551	NM_144925.3	Tnrc6a	NP_659174.3	ILMN_2424937	006280326	S	6506	CTTTGCACTGAGTGATGTTCTCCGTCTAATCGGCAATATGGGGGCAGCTG	7	+	130336837-130336886	7qF3	Mus musculus trinucleotide repeat containing 6a (Tnrc6a), mRNA.				GW182; D130023A07Rik; MGC11932; 2010321I05Rik; CAGH26; Tnrc6; 3110054G10Rik; AW557223	GW182; D130023A07Rik; MGC11932; 2010321I05Rik; CAGH26; Tnrc6; 3110054G10Rik; AW557223
Mus musculus	Riken	ILMN_203953	ILMN_203953	A430082A11RIK	ri|A430082A11|PX00138H09|AK040272|522					AK040272	A430082A11Rik		ILMN_1230920	004060195	S	393	CCCAACAGAAGGGACGGTTGCTTATCACAGGATCTACCAGAGCCAGGAGC										
Mus musculus	RefSeq	ILMN_197658	ILMN_197658	LOC380973	XM_354882.1	XM_354882.1			38077161	XM_354882.1	LOC380973		ILMN_2528901	000060468	S	7452	CGTCGATGTGGAGGCTCAGAGGAAGAACCTGGTCACATTAAATCAGGCGG										
Mus musculus	RefSeq	ILMN_187415	ILMN_329246	1700058G18RIK	XM_001480418.1	XM_001480418.1		67342	149261499	XM_001480418.1	1700058G18Rik	XP_001480468.1	ILMN_2443944	003890731	S	606	CCTGCAGACGACAAGTGCTCTCCGGCGTAGGGAATAATCACCCTTGAAAG					PREDICTED: Mus musculus RIKEN cDNA 1700058G18 gene (1700058G18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198437	ILMN_198437	LOC333154	XM_285965.1	XM_285965.1			28544764	XM_285965.1	LOC333154		ILMN_1252309	002000671	S	459	TCTTTGCACAGAAGTTCAAAGCCTGTCTCTGTGCACTAGCTCTCCAGAGC										
Mus musculus	RefSeq	ILMN_214471	ILMN_313766	LOC677319	XR_031654.1	XR_031654.1		677319	149269294	XR_031654.1	LOC677319		ILMN_2681551	005910653	S	645	GTCCAAACAGCCACCCTTCAGAGGAGCTGCTGAAGCAGCCTGACTACTCA					PREDICTED: Mus musculus similar to putative protein phosphatase 1 nuclear targeting subunit (LOC677319), misc RNA.					
Mus musculus	RefSeq	ILMN_210982	ILMN_210052	A130010J15RIK	NM_181048.2	NM_181048.2		319266	34328434	NM_181048.2	A130010J15Rik	NP_851391.1	ILMN_1243150	003390672	S	1579	GGCAACCTGGTCATCTGAAGAACTTCTGGCATCTATCTGAAGTAAAACTC	1	+	195001878-195001927	1qH6	Mus musculus RIKEN cDNA A130010J15 gene (A130010J15Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AL365322.1	AL365322.1
Mus musculus	RefSeq	ILMN_210052	ILMN_210052	A130010J15RIK	NM_181048.2	NM_181048.2		319266	34328434	NM_181048.2	A130010J15Rik	NP_851391.1	ILMN_2869139	003140470	S	1727	CTTTGGCATTTTAACCCAGTAGAAGACCTCACACTGGTGGCAGAAGGGGC	1	+	195002026-195002075	1qH6	Mus musculus RIKEN cDNA A130010J15 gene (A130010J15Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AL365322.1	AL365322.1
Mus musculus	RefSeq	ILMN_242420	ILMN_242420	BY080835	NM_001081244.1	NM_001081244.1		434436	124486968	NM_001081244.1	BY080835	NP_001074713.1	ILMN_3030685	005340520	I	620	TAGCCTCAGCCAGCTAAGAAGGCTCAACTCCAGTGAGGCTCGGGCACCCA	9	-	107495871-107495920	9qF1	Mus musculus cDNA sequence BY080835 (BY080835), mRNA.					
Mus musculus	RefSeq	ILMN_199538	ILMN_199538	LOC382707	XM_356635.1	XM_356635.1			38074069	XM_356635.1	LOC382707		ILMN_2535582	000510056	S	1	ATGCTGGACCAGATCTCCGTGTCGGAATTCGTGGCCGAGACCCTTGAAGA										
Mus musculus	RefSeq	ILMN_221796	ILMN_221796	NSBP1	NM_016710.2	NM_016710.2		50887	133778914	NM_016710.2	Nsbp1	NP_057919.2	ILMN_2740445	004830731	S	1033	CAAAAGGAAGGTCAGCCTGAGGAAGATGGAAAGGAAGATCAGCCTGAGGA	X	-	106200700-106200749	XqD	Mus musculus nucleosome binding protein 1 (Nsbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	GARP45; NBP-45; MGC103386	GARP45; NBP-45; MGC103386
Mus musculus	Riken	ILMN_206392	ILMN_206392	EMU2-PENDING	ri|9430032K24|PX00109C17|AK079128|946					AK079128	Emu2-pending		ILMN_1247922	003290129	S	805	TGAGAAGGACCCACAGGGGAGGGATCTGGCCAGGGAGTGAGGTCAGAGTG										
Mus musculus	Riken	ILMN_201961	ILMN_201961	0710007J16RIK	ri|0710007J16|R000005G14|AK003018|352					AK003018	0710007J16Rik		ILMN_2545961	004730195	S	8	TTGCCGTAGAGGTGCACAGCCGCCTCGAAGTTCTCCAGCTTCATCTGCTC										
Mus musculus	RefSeq	ILMN_218556	ILMN_218556	TMBIM6	NM_026669.3	NM_026669.3		110213	142383851	NM_026669.3	Tmbim6	NP_080945.1	ILMN_2697248	006480142	S	2180	CCTAACAGGCTTTTAACACAGGTGTCCATCTCCACTCTGTCCCCGGTCTC	15	+	99240312-99240361	15qF1	Mus musculus transmembrane BAX inhibitor motif containing 6 (Tmbim6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]		5031406P05Rik	5031406P05Rik
Mus musculus	RefSeq	ILMN_217474	ILMN_217474	NLK	NM_008702.2	NM_008702.2		18099	40254627	NM_008702.2	Nlk	NP_032728.2	ILMN_2683613	001580240	S	3190	CCTGGGGCATGGGCAGGAGGGGCCACCTAATGATGAAGCCAGTGATTGGC	11	-	78381874-78381923	11qB5	Mus musculus nemo like kinase (Nlk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	AI194375	AI194375
Mus musculus	Riken	ILMN_205467	ILMN_205467	A630053E16RIK	ri|A630053E16|PX00147C05|AK042031|3678					AK042031	A630053E16Rik		ILMN_2572779	003360661	S	3460	GTTTAGGGCTAGCTTGAGCTGCGGAAGAGCTGTTTGTCTCAAACAGATCA										
Mus musculus	Riken	ILMN_206526	ILMN_206526	D930014G18RIK	ri|D930014G18|PX00201E02|AK086221|3235					AK086221	D930014G18Rik		ILMN_1257842	000240113	S	2911	CCCCTTTTCTCAAGGCAGACCATCAAGCCAGACAAAATTGCAGGGAGTGG										
Mus musculus	RefSeq	ILMN_186790	ILMN_225167	NHLRC3	NM_172501.2	NM_172501.2		212114	141802855	NM_172501.2	Nhlrc3	NP_766089.1	ILMN_1219639	006380411	S	1148	TTCGGCGCTTAGTGCTTCCGGCTGGGAGGAGCTTCGGGTAGCACTTCAGA	3	-	53256280-53256318:53256319-53256329	3qC	Mus musculus NHL repeat containing 3 (Nhlrc3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA4083; 4833441N19; MGC130333; MGC107225; KIAA4083	mKIAA4083; 4833441N19; MGC130333; MGC107225; KIAA4083
Mus musculus	RefSeq	ILMN_222137	ILMN_222137	CCDC123	NM_028120.2	NM_028120.2		72140	141802193	NM_028120.2	Ccdc123	NP_082396.1	ILMN_2745153	003990255	S	2347	CGCTCCTCTCAGGGAGACCTACTGATTGGCCATGATTTCAGCTATGGTGA	7	+	36223483-36223532	7qB2	Mus musculus coiled-coil domain containing 123 (Ccdc123), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2610507L03Rik	2610507L03Rik
Mus musculus	RefSeq	ILMN_254681	ILMN_254681	OLFR497	NM_146738.1	NM_146738.1		258733	22129368	NM_146738.1	Olfr497	NP_666949.1	ILMN_2971654	000780259	S	846	GGTGATGATCCCCATGTTGAACCCACTTATCTACAGCCTCAGGAATAATG	7	+	115566932-115566981	7qE3	Mus musculus olfactory receptor 497 (Olfr497), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-9	MOR204-9
Mus musculus	RefSeq	ILMN_198480	ILMN_198480	LOC381239	XM_355176.1	XM_355176.1			38085617	XM_355176.1	LOC381239		ILMN_1241524	000580112	S	462	GCGAGCTTCCCAGAGCTCTCACTGCTTCAACTGTCCAGTCATTCAGTTTG										
Mus musculus	RefSeq	ILMN_208691	ILMN_208691	CASR	NM_013803.1	NM_013803.1		12374	7305100	NM_013803.1	Casr	NP_038831.1	ILMN_2588631	003360390	S	3758	TCCTAATGGAGGGAGAGGTTACCCGGTTGAGAGTTTTTCTTAGAGTCCCA	16	-	36494508-36494552:36494553-36494557	16qB3	Mus musculus calcium-sensing receptor (Casr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal [goid 5513] [evidence IEA]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence IDA]; Any process that activates or increases the rate of ATP hydrolysis by an ATPase [goid 32781] [evidence IDA]; Any process that activates or increases the rate of ATP hydrolysis by an ATPase [goid 32781] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	CaR; Gprc2a	CaR; Gprc2a
Mus musculus	Riken	ILMN_202413	ILMN_202413	SIAT10	ri|1700023B24|ZX00037B22|AK006263|774					AK006263	Siat10		ILMN_2549426	003940156	S	198	CGGCTGGTGACCGCCCCGCCCTAAAGCACGCACACGTGAAGCAACAACAA										
Mus musculus	RefSeq	ILMN_214402	ILMN_214402	HMX3	NM_008257.2	NM_008257.2		15373	38229310	NM_008257.2	Hmx3	NP_032283.2	ILMN_2647637	005550079	S	646	GCCGAGAGTCCCGAGAAGAAGCCGGCGTGCCGCAAAAAGAAGACGCGCAC	7	+	138687724-138687773	7qF3	Mus musculus H6 homeo box 3 (Hmx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Nkx5-1; Nkx5.1; Nkx-5.1	Nkx5-1; Nkx5.1; Nkx-5.1
Mus musculus	RefSeq	ILMN_214402	ILMN_214402	HMX3	NM_008257.2	NM_008257.2		15373	38229310	NM_008257.2	Hmx3	NP_032283.2	ILMN_2790983	002630400	S	984	AGTCAGCCAGCCGCTGCTCACCTTCCCGCACCCAGTCTACTACTCGCACC	7	+	138688062-138688111	7qF3	Mus musculus H6 homeo box 3 (Hmx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Nkx5-1; Nkx5.1; Nkx-5.1	Nkx5-1; Nkx5.1; Nkx-5.1
Mus musculus	RefSeq	ILMN_217863	ILMN_217863	RIBC1	NM_025660.1	NM_025660.1		66611	13385123	NM_025660.1	Ribc1	NP_079936.1	ILMN_2688533	006550537	S	1446	CCCAGTAGGAGGGAACTAAAGCCAAACCTCCACTGTCTACTCTAGGTAAT	X	-	148439137-148439186	XqF3	Mus musculus RIB43A domain with coiled-coils 1 (Ribc1), mRNA.				2610028I09Rik; W08639	2610028I09Rik; W08639
Mus musculus	RefSeq	ILMN_255903	ILMN_255903	ACTR3	NM_023735.1	NM_023735.1		74117	23956221	NM_023735.1	Actr3	NP_076224.1	ILMN_2851875	006250433	S	2232	GATTCTGCAGTAGCTCTTTAAAAGCACAGCGGTTGGATAGCAAGCTGACT	1	-	127289709-127289758	1qE3	Mus musculus ARP3 actin-related protein 3 homolog (yeast) (Actr3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1200003A09Rik; MGC118188; Arp3	1200003A09Rik; MGC118188; Arp3
Mus musculus	RefSeq	ILMN_210402	ILMN_210402	UBQLN4	NM_033526.2	NM_033526.2		94232	118131205	NM_033526.2	Ubqln4	NP_277068.1	ILMN_2605268	006130167	S	2995	CTGACTGGTACCCTGGCCACCATTGCTTCCTTGGTGAAAGAATAGTGAGG	3	+	88373270-88373319	3qF1	Mus musculus ubiquilin 4 (Ubqln4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI663987; UBIN; A1u	AI663987; UBIN; A1u
Mus musculus	MEEBO	ILMN_218569	ILMN_218569	RYR3	scl18867.16.46_15	XM_130497.2			38075724	XM_130497.2	Ryr3		ILMN_2697410	001470731	S	5035	GCAAAGTGTCAAGGAATCCACCTGACTGCTAACGGAGCTCTCGTTTCTAC						Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules) [goid 30314] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210182	ILMN_210182	ITGA11	NM_176922.4	NM_176922.4		319480	40254394	NM_176922.4	Itga11	NP_795896.3	ILMN_2603054	005050333	S	3851	CTCCAGTACAGATCCCTAAGGACTAAAAGGGACCCTCCAAGACCCACCGG	9	+	62630706-62630755	9qB	Mus musculus integrin alpha 11 (Itga11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The orderly movement of cells from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate [goid 6929] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	4732459H24Rik	4732459H24Rik
Mus musculus	RefSeq	ILMN_210182	ILMN_210182	ITGA11	NM_176922.4	NM_176922.4		319480	40254394	NM_176922.4	Itga11	NP_795896.3	ILMN_2701778	006960397	S	4811	TCATCTGAACAATGTCATCTGTTCCCCTATGCGGTACGACCTTTACTGTC	9	+	62631666-62631715	9qB	Mus musculus integrin alpha 11 (Itga11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The orderly movement of cells from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate [goid 6929] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	4732459H24Rik	4732459H24Rik
Mus musculus	RefSeq	ILMN_210182	ILMN_210182	ITGA11	NM_176922.4	NM_176922.4		319480	40254394	NM_176922.4	Itga11	NP_795896.3	ILMN_2844032	004050136	S	4680	AGGCATCTCGCCGGCCAGCTCTGGGATAAGCCCCAAGGACAAGGGGCATG	9	+	62631535-62631584	9qB	Mus musculus integrin alpha 11 (Itga11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The orderly movement of cells from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate [goid 6929] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	4732459H24Rik	4732459H24Rik
Mus musculus	RefSeq	ILMN_218508	ILMN_218508	TCAP	NM_011540.2	NM_011540.2		21393	124248559	NM_011540.2	Tcap	NP_035670.2	ILMN_2933357	007150685	S	599	AGGACAATGGAGGAGAGCTGCTGGCAGTGGCTGCTTTGTAGTTTGCCCAG	11	+	98245918-98245967	11qD	Mus musculus titin-cap (Tcap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	AJ223855; AI503981	AJ223855; AI503981
Mus musculus	RefSeq	ILMN_216312	ILMN_216312	GSE1	NM_198671.1	NM_198671.1		382034	46559413	NM_198671.1	Gse1	NP_941073.1	ILMN_1219690	004060040	S	6624	GTAGTAATTAGGTATTTATGAATATATTGCTGTAATTTCTGACATCCCGA	8	+	123105206-123105255	8qE1	Mus musculus genetic suppressor element 1 (Gse1), mRNA.				MGC58013; 2210013I18Rik; mKIAA0182	MGC58013; 2210013I18Rik; mKIAA0182
Mus musculus	RefSeq	ILMN_216312	ILMN_216312	GSE1	NM_198671.1	NM_198671.1		382034	46559413	NM_198671.1	Gse1	NP_941073.1	ILMN_2705469	000940450	S	2973	GTCCGCAGCAGACTCAGTGACAAACTCTTCGAGGGACAGTCCTCCCGTCT	8	+	123098120-123098169	8qE1	Mus musculus genetic suppressor element 1 (Gse1), mRNA.				MGC58013; 2210013I18Rik; mKIAA0182	MGC58013; 2210013I18Rik; mKIAA0182
Mus musculus	RefSeq	ILMN_196384	ILMN_216312	GSE1	NM_198671.1	NM_198671.1		382034	46559413	NM_198671.1	Gse1	NP_941073.1	ILMN_2523912	001940706	S	5507	ACTCAGCCAGAGGAACTCCTGTGGGACAATGGAAGGGACTGTGCGTGTCT	8	+	123104089-123104138	8qE1	Mus musculus genetic suppressor element 1 (Gse1), mRNA.				MGC58013; 2210013I18Rik; mKIAA0182	MGC58013; 2210013I18Rik; mKIAA0182
Mus musculus	RefSeq	ILMN_216312	ILMN_216312	GSE1	NM_198671.1	NM_198671.1		382034	46559413	NM_198671.1	Gse1	NP_941073.1	ILMN_2937674	007320594	S	6279	GCACAGCAGGCTCAGCACCTCTGAGGTGTGCATTAGCCACTTATAGCAGC	8	+	123104861-123104910	8qE1	Mus musculus genetic suppressor element 1 (Gse1), mRNA.				MGC58013; 2210013I18Rik; mKIAA0182	MGC58013; 2210013I18Rik; mKIAA0182
Mus musculus	MEEBO	ILMN_191290	ILMN_191290	21716071_6081_RC	21716071_6081_rc						21716071_6081_rc		ILMN_2477833	005870309	S	19	TCGAGGTCGAGGCAGCGCTTGTTGTTGATGAACATGACCCAGTTGTGGGC										
Mus musculus	RefSeq	ILMN_197153	ILMN_197153	LOC193453	XM_110047.2	XM_110047.2			28523679	XM_110047.2	LOC193453		ILMN_1237851	007560553	S	866	CAACGCCCGTACCAGGGGTGAAGCTAAAGTGTATTTCCACGGTCTCCCCG										
Mus musculus	RefSeq	ILMN_251060	ILMN_251060	ASH2L	NM_011791.2	NM_011791.2		23808	124248551	NM_011791.2	Ash2l	NP_035921.2	ILMN_3075168	003870441	I	71	GGTCCCGGAGCCGCTGCAAGTGCCACAACGGCGGAGGACCGAGAGACAGA	8	-	26951131-26951180	8qA2	Mus musculus ash2 (absent, small, or homeotic)-like (Drosophila) (Ash2l), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_251060	ILMN_251060	ASH2L	NM_011791.2	NM_011791.2		23808	124248551	NM_011791.2	Ash2l	NP_035921.2	ILMN_3154222	001740356	A	2122	CTGCCAGGGAGGACCTGTTACTTTCCTGTGTCTGTGTGTTCCAAAGAGCG	8	-	26927595-26927644	8qA2	Mus musculus ash2 (absent, small, or homeotic)-like (Drosophila) (Ash2l), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_192732	ILMN_192732	ZNHIT2	NM_013859.2	NM_013859.2		29805	59676553	NM_013859.2	Znhit2	NP_038887.2	ILMN_2490803	005670037	S	1130	GATGGCAACGCTTACTGGAGAGTTAGAACGGCTTTGGGGAGGCCCAGTGC	19	+	6062336-6062385	19qA	Mus musculus zinc finger, HIT domain containing 2 (Znhit2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fon; C11orf5; ORF6	Fon; C11orf5; ORF6
Mus musculus	RefSeq	ILMN_210680	ILMN_210680	RHPN2	NM_027897.3	NM_027897.3		52428	142365567	NM_027897.3	Rhpn2	NP_082173.2	ILMN_2608133	002030619	S	3258	GAGAACACAAATGCCTTAAGGAAAGTGTGCCCGCTATCCCTGGGGCTCTG	7	+	36177212-36177261	7qB1-qB2	Mus musculus rhophilin, Rho GTPase binding protein 2 (Rhpn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D7Ertd784e; AA536890; C85860; 1300002E07Rik	D7Ertd784e; AA536890; C85860; 1300002E07Rik
Mus musculus	RefSeq	ILMN_216542	ILMN_216542	CLCF1	NM_019952.3	NM_019952.3		56708	146135029	NM_019952.3	Clcf1	NP_064336.1	ILMN_1257971	004900577	S	213	CCAGAAAACCTATGACCTCACCCGCTACCTGGAGCATCAACTCCGCAGCT				19qA	Mus musculus cardiotrophin-like cytokine factor 1 (Clcf1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IDA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	MGC129163; CLC; Bsf3; MGC129162	MGC129163; CLC; Bsf3; MGC129162
Mus musculus	RefSeq	ILMN_216542	ILMN_216542	CLCF1	NM_019952.3	NM_019952.3		56708	146135029	NM_019952.3	Clcf1	NP_064336.1	ILMN_1254497	006550370	S	438	TTACTTGCGTGGCCTCAACCGTCAGGCTGCCACAGCTGAACTCCGACGTA				19qA	Mus musculus cardiotrophin-like cytokine factor 1 (Clcf1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IDA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	MGC129163; CLC; Bsf3; MGC129162	MGC129163; CLC; Bsf3; MGC129162
Mus musculus	RefSeq	ILMN_184505	ILMN_184505	TUFT1	NM_011656.2	NM_011656.2		22156	118130085	NM_011656.2	Tuft1	NP_035786.1	ILMN_2419185	003450370	S	2450	CCTGAGACTTCAGGCAGAACGAGTGGGTTGTACATAATCTCCGTGCCCCT	3	-	94416745-94416794	3qF2.1	Mus musculus tuftelin 1 (Tuft1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_184505	ILMN_184505	TUFT1	NM_011656.2	NM_011656.2		22156	118130085	NM_011656.2	Tuft1	NP_035786.1	ILMN_2461907	000450184	S	103	GCTGACGCTCCAGAGTGAACTGACAGGAGATGAACTTGAGCACATAGCCC	3	-	94443321-94443370	3qF2.1	Mus musculus tuftelin 1 (Tuft1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_219681	ILMN_258077	1810033B17RIK	NM_026985.1	NM_026985.1		69189	109659833	NM_026985.1	1810033B17Rik	NP_081261.1	ILMN_2712151	003170343	S	610	GCACCTGCTAGTGAAGATGGCAGATGGGGGTGGGTACTGAGCTTGAGTGT	8	+	3668383-3668432	8qA1.1	Mus musculus RIKEN cDNA 1810033B17 gene (1810033B17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221520	ILMN_221520	CLDN17	NM_181490.3	NM_181490.3		239931	141801892	NM_181490.3	Cldn17	NP_852467.1	ILMN_1218734	007510709	S	824	CCAACATCAGTCCCTGGCTTATGCTCATGTGTTTTATAAAGTCACCCCAG	16	-	88506350-88506399	16qC3.3	Mus musculus claudin 17 (Cldn17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	Riken	ILMN_204069	ILMN_204069	A730006N07RIK	ri|A730006N07|PX00148I18|AK042571|1251					AK042571	A730006N07Rik		ILMN_1228284	002370717	S	1001	CAGGATTGCTCCCAGGCATTGTAGCTGGTAGTTTCCCTGCCAGTTCTGAC										
Mus musculus	MEEBO	ILMN_217593	ILMN_217593	C330016O10RIK	scl40256.6.1_2	NM_145974.2			31981858	NM_145974.2	C330016O10Rik		ILMN_2685222	004070017	S	1604	TTAGGGGCCAGGAGCAGGCTCTGCGCTTTGAGCAGGAGAGGCAGACTTGG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_197928	ILMN_226851	2310015A05RIK	XM_984819.1	XM_984819.1		72315	94401058	XM_984819.1	2310015A05Rik	XP_989913.1	ILMN_1222922	002320670	S	370	GCACAGAAGCGGATCCTGGACCTGGAAAAGAGCCTGCAGTTCCTACAGCA					PREDICTED: Mus musculus RIKEN cDNA 2310015A05 gene (2310015A05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_204626	ILMN_239007	DIP2A	NM_001081419.1	NM_001081419.1		64451	124487256	NM_001081419.1	Dip2a	NP_001074888.1	ILMN_2566438	005560452	S	440	CTCCGTTGAGACCTACACGCCTCCAGACACGTCATCTGCCTCAGAAGATG	10	-	75780815-75780839:75782212-75782236	10qC1	Mus musculus DIP2 disco-interacting protein 2 homolog A (Drosophila) (Dip2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4931420H10Rik; Dip2; AI426328; Kiaa0184-hp; mKIAA0184	4931420H10Rik; Dip2; AI426328; Kiaa0184-hp; mKIAA0184
Mus musculus	RefSeq	ILMN_222875	ILMN_222875	FFAR2	NM_146187.3	NM_146187.3		233079	142373011	NM_146187.3	Ffar2	NP_666299.1	ILMN_2756046	006520725	S	2132	CCACTGTTATGCCGGGATCTGGGTCACATGCTTATCCTCTGTGTCACCAG	7	-	31603486-31603535	7qB1	Mus musculus free fatty acid receptor 2 (Ffar2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	Gpr43; MGC28611	Gpr43; MGC28611
Mus musculus	RefSeq	ILMN_219041	ILMN_219041	CHRAC1	NM_053068.3	NM_053068.3		93696	142365642	NM_053068.3	Chrac1	NP_444298.1	ILMN_1237667	001500431	S	302	ATATTACCAAAGAAGATTTTAGCTAGTAAGTACCTGAAAATGCTCAAAGA	15	+	72923956-72924005	15qD3	Mus musculus chromatin accessibility complex 1 (Chrac1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	YCL1; 2810406L04Rik; 2410152E03Rik	YCL1; 2810406L04Rik; 2410152E03Rik
Mus musculus	RefSeq	ILMN_210592	ILMN_210592	0910001A06RIK	NM_144846.4	NM_144846.4		223601	146149091	NM_144846.4	0910001A06Rik	NP_659095.1	ILMN_1235939	003940468	S	306	GGGGAATCTTCTTAAAGTTTTGACATGCACAGACCTTGAGCAGGGGCCAA				15qD1	Mus musculus RIKEN cDNA 0910001A06 gene (0910001A06Rik), mRNA.				AW122079	AW122079
Mus musculus	RefSeq	ILMN_210592	ILMN_210592	0910001A06RIK	NM_144846.4	NM_144846.4		223601	146149091	NM_144846.4	0910001A06Rik	NP_659095.1	ILMN_2607196	002140102	S	3512	GTAGTAATCCTGCTGTGGCCTTTCAGGTAACATGGTTCACACTCTGCATG				15qD1	Mus musculus RIKEN cDNA 0910001A06 gene (0910001A06Rik), mRNA.				AW122079	AW122079
Mus musculus	MEEBO	ILMN_195779	ILMN_195779	3830408P04RIK	scl31304.6_75				31541944	NM_023647	3830408P04Rik		ILMN_1249838	003890673	S	3395	CCTCTGACTCCCTCTATGTAAGTCCTTTTCGGGCCATACTTGGTTTCAGT										
Mus musculus	RefSeq	ILMN_217639	ILMN_217639	MT2	NM_008630.2	NM_008630.2		17750	123701854	NM_008630.2	Mt2	NP_032656.1	ILMN_1219154	002190196	S	415	GAAGGGGGGCGGAGGGGTCCCCACATCTGTGTAAATAGACCATGTAGAAG	8	+	96697326-96697327:96697328-96697375	8qC5	Mus musculus metallothionein 2 (Mt2), mRNA.		A series of molecular signals mediated by the detection of nitric oxide (NO) [goid 7263] [evidence IMP]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IMP]; Any process that reduce or remove the toxicity of copper ion. These include transport of copper away from sensitive areas and to compartments or complexes whose purpose is sequestration of copper ion [goid 10273] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Mt-2; MT-II; AA409533	Mt-2; MT-II; AA409533
Mus musculus	RefSeq	ILMN_217082	ILMN_217082	GK5	NM_177352.4	NM_177352.4		235533	146198613	NM_177352.4	Gk5	NP_796326.1	ILMN_2678904	000830681	S	1507	GAAGCTGAGGCAAAGCGAGATGGTTTTCAAGCCTCAGAAGAAGTGGCAGG				9qE3.3	Mus musculus glycerol kinase 5 (putative) (Gk5), mRNA.		The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + glycerol = ADP + glycerol 3-phosphate [goid 4370] [evidence IEA]	C330018K18Rik; AV095337; G630067D24Rik	C330018K18Rik; AV095337; G630067D24Rik
Mus musculus	RefSeq	ILMN_240635	ILMN_240635	DDO	NM_027442.3	NM_027442.3		70503	31981943	NM_027442.3	Ddo	NP_081718.2	ILMN_2808191	004180021	S	2579	GTGCCCATGAAGTGCCTACAACCTCCTGTAACTACAGCTTCAGGGTTTCC	10	+	40337997-40338046	10qB1	Mus musculus D-aspartate oxidase (Ddo), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid [goid 6531] [evidence IMP]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The introduction of semen or sperm into the genital tract of a female [goid 7320] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 3884] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: D-aspartate + H2O + O2 = oxaloacetate + NH3 + H2O2 [goid 8445] [evidence IEA]	5330420D20Rik; 5730402C02Rik; AI467244	5330420D20Rik; 5730402C02Rik; AI467244
Mus musculus	RefSeq	ILMN_220373	ILMN_220373	MSTO1	NM_144898.1	NM_144898.1		229524	21450272	NM_144898.1	Msto1	NP_659147.1	ILMN_2721208	004860402	S	827	ACACGGCATTTGGTCTGGTGCACCTGACTGGATACAGCTCCTTCGTCTGT	3	-	88715280-88715329	3qF1	Mus musculus misato homolog 1 (Drosophila) (Msto1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]		MGC11722; MGC118015; mst; BC008103; FLJ10504	MGC11722; MGC118015; mst; BC008103; FLJ10504
Mus musculus	RefSeq	ILMN_187708	ILMN_187708	USP52	NM_133992.1	NM_133992.1		103135	29789348	NM_133992.1	Usp52	NP_598753.1	ILMN_2790392	003370692	S	4222	CATCTAGCTGCTTGAGAGACGGTGGCTGGGTGGACCAGCTTGTAGAGTCT	10	+	127724079-127724128	10qD3	Mus musculus ubiquitin specific peptidase 52 (Usp52), mRNA.				AW742773; 1200014O24Rik; mKIAA0710; AI047843	AW742773; 1200014O24Rik; mKIAA0710; AI047843
Mus musculus	RefSeq	ILMN_187708	ILMN_187708	USP52	NM_133992.1	NM_133992.1		103135	29789348	NM_133992.1	Usp52	NP_598753.1	ILMN_2790399	001690121	S	3978	CTGGAAAGCAGCAAAATTGTTGCAAAGGTTCTAGCTGCCAGATTCCCCCT	10	+	127723835-127723884	10qD3	Mus musculus ubiquitin specific peptidase 52 (Usp52), mRNA.				AW742773; 1200014O24Rik; mKIAA0710; AI047843	AW742773; 1200014O24Rik; mKIAA0710; AI047843
Mus musculus	RefSeq	ILMN_219719	ILMN_219719	PFKFB4	NM_173019.5	NM_173019.5		270198	111120327	NM_173019.5	Pfkfb4	NP_766607.3	ILMN_2712668	002900327	S	3220	GGTTCAGGGGTTCACAGGCGGACTGCCTACATTTCCTGCTTTCCCTAGAA	9	+	108934598-108934647	9qF2	Mus musculus 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 (Pfkfb4), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 6000] [evidence IEA]; The chemical reactions and pathways involving fructose 2,6-bisphosphate. The D enantiomer is an important regulator of the glycolytic and gluconeogenic pathways. It inhibits fructose 1,6-bisphosphatase and activates phosphofructokinase [goid 6003] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 4331] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 2,6-bisphosphate [goid 3873] [evidence ISO]	C230090D14	C230090D14
Mus musculus	RefSeq	ILMN_213444	ILMN_327744	LOC100047653	XM_001479084.1	XM_001479084.1		100047653	149263728	XM_001479084.1	LOC100047653	XP_001479134.1	ILMN_2637105	000830379	S	415	ATGTGGATGCCACGGGGGTGAACCACAGAAAACTTCAAGGCATGTGCGGT					PREDICTED: Mus musculus hypothetical protein LOC100047653, transcript variant 1 (LOC100047653), mRNA.					
Mus musculus	RefSeq	ILMN_184153	ILMN_247820	INO80E	NM_153580.1	NM_153580.1		233875	23956375	NM_153580.1	Ino80e	NP_705808.1	ILMN_1244842	002350279	S	481	CCCCCTGAGGCCCAAGCTGGAGAAACGGCCCCGCCTACCCCGGAAACTCA	7	-	134000741-134000790	7qF3	Mus musculus NO80 complex subunit E (Ino80e), mRNA.				MGC31515; Ccdc85; AI225782; AI854876	MGC31515; Ccdc85; AI225782; AI854876
Mus musculus	RefSeq	ILMN_247820	ILMN_247820	INO80E	NM_153580.1	NM_153580.1		233875	23956375	NM_153580.1	Ino80e	NP_705808.1	ILMN_2876560	005360008	S	726	ACGACCTGGTGATCGACATTCCAGAGTAGCCACCCAGTGCCACCTGCCAG	7	-	133996262-133996283:133996284-133996311	7qF3	Mus musculus NO80 complex subunit E (Ino80e), mRNA.				MGC31515; Ccdc85; AI225782; AI854876	MGC31515; Ccdc85; AI225782; AI854876
Mus musculus	RefSeq	ILMN_231730	ILMN_231730	OTTMUSG00000000997	NM_001037932.1	NM_001037932.1		628813	83776580	NM_001037932.1	OTTMUSG00000000997	NP_001033021.1	ILMN_3162516	000430035	I	1086	ATCCAACGGTATGCCAGGACAGGTAAAGGCGAAGCCTGGGGTGAGCAGAG	11	-	83961956-83962005	11qC	Mus musculus predicted gene, OTTMUSG00000000997 (OTTMUSG00000000997), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			FLJ39647	FLJ39647
Mus musculus	RefSeq	ILMN_219780	ILMN_219780	RPH3AL	NM_029548.1	NM_029548.1		380714	41152501	NM_029548.1	Rph3al	NP_083824.1	ILMN_2713507	007650722	S	550	CCACAGAAACACAGCCTCCGAGTGCTGAAACCAGCCGTGTCTACACATGG	11	-	75670512-75670561	11qB5	Mus musculus rabphilin 3A-like (without C2 domains) (Rph3al), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis [goid 17158] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 45744] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]	Noc2; Gm1753; AI551877; 6530413F01Rik	Noc2; Gm1753; AI551877; 6530413F01Rik
Mus musculus	RefSeq	ILMN_188502	ILMN_188502	ABHD11	NM_145215.1	NM_145215.1		68758	21644576	NM_145215.1	Abhd11	NP_660250.1	ILMN_2453209	004480368	S	1277	CTGGGTCCACAGCGACAAACCCCAAGACTTCATGGATGCTGTCACCAGCT	5	+	135487829-135487878	5qG2	Mus musculus abhydrolase domain containing 11 (Abhd11), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Wbscr21; 1110054D16Rik; A630008N09Rik	Wbscr21; 1110054D16Rik; A630008N09Rik
Mus musculus	RefSeq	ILMN_199083	ILMN_199083	LOC333670	XM_290084.2	XM_290084.2			38090814	XM_290084.2	LOC333670		ILMN_1224782	006510468	S	426	GGTCATTAAAGGGAAAGATGGGACCCCTACTCACTATGAGTCACTCCTGG										
Mus musculus	MEEBO	ILMN_189372	ILMN_189372	BVES	scl38950.5_617				13195597	NM_024285	Bves		ILMN_1222934	007400619	S	1236	CTGATGAGTGAGCAGGAGAAGTCCCACACTCTGTTGTGACCTTTGGGTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]				
Mus musculus	MEEBO	ILMN_189372	ILMN_189372	BVES	scl38950.5_617				13195597	NM_024285	Bves		ILMN_2460692	000580136	S	6	GTGCTTTCTGCAGACCTACTATAGGAAGCCTTTCAGGTGCCGTTCACATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]				
Mus musculus	MEEBO	ILMN_188248	ILMN_188248	MKIAA0864	scl0001263.1_3048				26006220	AB093269	mKIAA0864		ILMN_2451057	007210246	S	13	CTGAGATTTTACAAGAAGGCCTGTCAGGAGGCTAAGGGGGCTTCAGGCCA										
Mus musculus	RefSeq	ILMN_218978	ILMN_218978	HOXD10	NM_013554.3	NM_013554.3		15430	141802469	NM_013554.3	Hoxd10	NP_038582.2	ILMN_2702687	003830608	S	1656	CTTGTAGCCTTTCCTTGTGGTGCATCTGTGGTTTGGTAGAAGTACAAGCG	2	+	74533049-74533098	2qC3	Mus musculus homeo box D10 (Hoxd10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway [goid 21520] [evidence IGI]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IGI]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IGI]; The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 48935] [evidence IGI]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	AI874987; Hox-5.3; AI385591; Hox-4.5	AI874987; Hox-5.3; AI385591; Hox-4.5
Mus musculus	RefSeq	ILMN_212226	ILMN_212226	TSPAN1	NM_133681.4	NM_133681.4		66805	146149095	NM_133681.4	Tspan1	NP_598442.1	ILMN_2624180	003180184	S	1528	GTGGGTGGAGTCACTAGTTGGAGCCCTCCAGGAACTTAGATAAGTACGTC				4qD1	Mus musculus tetraspanin 1 (Tspan1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9030418M05Rik	9030418M05Rik
Mus musculus	RefSeq	ILMN_200431	ILMN_250737	GATC	NM_029645.3	NM_029645.3		384281	142388151	NM_029645.3	Gatc	NP_083921.1	ILMN_1236821	003190358	S	279	CACTGACGGTGTGGAGCCCCTAGAGTCGGTACTGGAGGACAGATGTCTCT	5	-	115785571-115785579:115790851-115790891	5qF	Mus musculus glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial) (Gatc), mRNA.		Any process that modulates the ability of the translational apparatus to interpret the genetic code [goid 6450] [evidence IEA]			
Mus musculus	RefSeq	ILMN_221390	ILMN_250737	GATC	NM_029645.3	NM_029645.3		384281	142388151	NM_029645.3	Gatc	NP_083921.1	ILMN_2734941	007610112	S	1331	GGAGAGTTCAGTTTACAATGCCAGATCTGAATTGTAAGAACTCCGAGTCT	5	-	115783647-115783696	5qF	Mus musculus glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial) (Gatc), mRNA.		Any process that modulates the ability of the translational apparatus to interpret the genetic code [goid 6450] [evidence IEA]			
Mus musculus	RefSeq	ILMN_220929	ILMN_220929	SDC4	NM_011521.2	NM_011521.2		20971	118130129	NM_011521.2	Sdc4	NP_035651.1	ILMN_2728729	001470121	S	2034	GAAGTCATTCCTCGGTTGCACTAGCCACACAAAATGCTCAGTCACCATCC	2	-	164250123-164250172	2qH3	Mus musculus syndecan 4 (Sdc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	ryudocan; Synd4; AA959608; AW108331; syndecan-4	ryudocan; Synd4; AA959608; AW108331; syndecan-4
Mus musculus	RefSeq	ILMN_218819	ILMN_218819	STX1A	NM_016801.3	NM_016801.3		20907	118131152	NM_016801.3	Stx1a	NP_058081.2	ILMN_2700608	000780524	S	1981	GCCACCTCCCTTTACCCCTTCACCAAAGGTCTTGGTACAACCAGCTGCCC	5	+	135526879-135526928	5qG2	Mus musculus syntaxin 1A (brain) (Stx1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 1a (or orthologs thereof) [goid 70044] [evidence ISO]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, and complexin I (or orthologs thereof) [goid 70032] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence IDA]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence ISO]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; The inhibition of the passage of calcium ions through a calcium channel; the function of some venoms [goid 19855] [evidence IMP]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	HPC-1	HPC-1
Mus musculus	RefSeq	ILMN_216787	ILMN_216787	2310022B05RIK	NM_175149.3	NM_175149.3		69551	42475991	NM_175149.3	2310022B05Rik	NP_780358.2	ILMN_1257333	007380296	S	3186	CCATTCTTCACTCCGCCCTCTCCTTTGATACATACTTTCGAAATGGTAAA	8	-	127159727-127159776	8qE2	Mus musculus RIKEN cDNA 2310022B05 gene (2310022B05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_252320	ILMN_252320	HAO1	NM_010403.1	NM_010403.1		15112	6754155	NM_010403.1	Hao1	NP_034533.1	ILMN_2875475	002340162	S	1757	GTGGCACTCATTGCATTTGACAGGGATGTGTCTAGTCCAGTTGGGACCAC	2	-	134189024-134189073	2qF2	Mus musculus hydroxyacid oxidase 1, liver (Hao1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The reactions of the C2 pathway bring about the metabolic conversion of two molecules of 2-phosphoglycolate to one molecule of 3-phosphoglycerate, which can be used by the C3 cycle, and one molecule of carbon dioxide (CO2) [goid 9854] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of the reaction: (S)-2-hydroxy-acid + O2 = 2-oxo acid + H2O2 [goid 3973] [evidence IDA]	GOX; MGC141211; Hao-1; Gox1	GOX; MGC141211; Hao-1; Gox1
Mus musculus	RefSeq	ILMN_184877	ILMN_237434	USP13	NM_001013024.2	NM_001013024.2		72607	118131141	NM_001013024.2	Usp13	NP_001013042.1	ILMN_2422325	001500678	S	4473	GGAAATTCCTACACTAAGCAGCCTTACAAAACTCAGTCCCTAAGGGCCAC	3	+	32833966-32834015	3qA3	Mus musculus ubiquitin specific peptidase 13 (isopeptidase T-3) (Usp13), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	ISOT3; 2700071E21Rik; IsoT-3; MGC107670; AI848077	ISOT3; 2700071E21Rik; IsoT-3; MGC107670; AI848077
Mus musculus	RefSeq	ILMN_213823	ILMN_213823	ZFP446	NM_175558.2	NM_175558.2		269870	31342174	NM_175558.2	Zfp446	NP_780767.1	ILMN_2917270	003170017	S	3088	AATTTCGAACTATGGAGCAGGATTCAGTGCTGTAGGCAGATCTCTGTTAG	7	+	11884366-11884415	7qA1	Mus musculus zinc finger protein 446 (Zfp446), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AV306632; A930031C22; A630035I11Rik; AA120513	AV306632; A930031C22; A630035I11Rik; AA120513
Mus musculus	MEEBO	ILMN_214156	ILMN_214156	ADAMTS9	scl28664.4.1_178	XM_204236.1			25022362	XM_204236.1	Adamts9		ILMN_1258398	004920411	S	1201	CTCTCATTCAAGCTCATCCTCACATCTGATGTCGTATTAGACACAAATGG						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence ISO]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of melanocyte differentiation [goid 45636] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]		
Mus musculus	RefSeq	ILMN_216241	ILMN_216241	6720456H20RIK	NM_172600.2	NM_172600.2		218989	40254232	NM_172600.2	6720456H20Rik	NP_766188.2	ILMN_2786509	006370014	S	4716	CTGGACCCTAAGGCCAGCCCACTCCAGAGGGCACAGGACAAGGGCATTGT	14	+	49134556-49134605	14qC1	Mus musculus RIKEN cDNA 6720456H20 gene (6720456H20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5930435P15	5930435P15
Mus musculus	RefSeq	ILMN_216241	ILMN_216241	6720456H20RIK	NM_172600.2	NM_172600.2		218989	40254232	NM_172600.2	6720456H20Rik	NP_766188.2	ILMN_1216836	002450338	S	2450	ATTTTAGTCTTAAGTTTTATACTATATACCAAGTACCTGGTTTTTTATTT	14	+	49132290-49132339	14qC1	Mus musculus RIKEN cDNA 6720456H20 gene (6720456H20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5930435P15	5930435P15
Mus musculus	RefSeq	ILMN_216241	ILMN_216241	6720456H20RIK	NM_172600.2	NM_172600.2		218989	40254232	NM_172600.2	6720456H20Rik	NP_766188.2	ILMN_2668886	002850215	S	4757	GGGCATTGTGGCTGCCATCATCACTAGCAAAGCACTGAGCACGTCCCACT	14	+	49134597-49134646	14qC1	Mus musculus RIKEN cDNA 6720456H20 gene (6720456H20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5930435P15	5930435P15
Mus musculus	RefSeq	ILMN_193341	ILMN_193341	CD40	NM_170701.2	NM_170701.2		21939	70608199	NM_170701.2	Cd40	NP_733802.1	ILMN_2496288	001660379	S	751	TTCAGCCCTGTCGAACCAGCCTCCTGACTCACCCTCGCAATGTCCCACAC	2	+	164895248-164895274:164895275-164895297	2qH3	Mus musculus CD40 antigen (Cd40), transcript variant 3, mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IGI]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell capable of activating, perpetuating, or inhibiting an immune response [goid 2768] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]	TRAP; IMD3; AI326936; IGM; HIGM1; p50; Tnfrsf5; Bp50; T-BAM; GP39	TRAP; IMD3; AI326936; IGM; HIGM1; p50; Tnfrsf5; Bp50; T-BAM; GP39
Mus musculus	RefSeq	ILMN_198580	ILMN_260536	GM648	NM_001033372.2	NM_001033372.2		270599	141803341	NM_001033372.2	Gm648	NP_001028544.1	ILMN_1214195	002810020	S	711	CCTGTGGAAGTCAGGATTCAGTTTGTCGAGTTCTCCATCAAGGAGGCGGC	X	-	53797725-53797774	XqA5	Mus musculus gene model 648, (NCBI) (Gm648), mRNA.					
Mus musculus	RefSeq	ILMN_212619	ILMN_212619	TCF7L2	NM_009333.2	NM_009333.2		21416	31543848	NM_009333.2	Tcf7l2	NP_033359.2	ILMN_2641647	004250328	S	2849	GACTTGAACATTAGCGAGAGGGTCTGAGCAGCCGTCTGAGCAGCCGTGGG	19	+	56007399-56007448	19qD2	Mus musculus transcription factor 7-like 2, T-cell specific, HMG-box (Tcf7l2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 30538] [evidence IGI]; The process by which the anatomical structures of the hindgut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48619] [evidence IGI]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]	mTcf-4B; TCF4E; Tcf-4; mTcf-4E; Tcf4; TCF4B	mTcf-4B; TCF4E; Tcf-4; mTcf-4E; Tcf4; TCF4B
Mus musculus	RefSeq	ILMN_212619	ILMN_212619	TCF7L2	NM_009333.2	NM_009333.2		21416	31543848	NM_009333.2	Tcf7l2	NP_033359.2	ILMN_1245997	006960477	S	1095	GAAGCCCCTTAATGCATTCATGTTGTATATGAAAGAGATGAGAGCGAAGG	19	+	55993464-55993513	19qD2	Mus musculus transcription factor 7-like 2, T-cell specific, HMG-box (Tcf7l2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 30538] [evidence IGI]; The process by which the anatomical structures of the hindgut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48619] [evidence IGI]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]	mTcf-4B; TCF4E; Tcf-4; mTcf-4E; Tcf4; TCF4B	mTcf-4B; TCF4E; Tcf-4; mTcf-4E; Tcf4; TCF4B
Mus musculus	RefSeq	ILMN_212619	ILMN_212619	TCF7L2	NM_009333.2	NM_009333.2		21416	31543848	NM_009333.2	Tcf7l2	NP_033359.2	ILMN_3006739	005050717	S	2834	CCATTCTGTAAAACAAGACTTGAACATTAGCGAGAGGGTCTGAGCAGCCG	19	+	56007384-56007433	19qD2	Mus musculus transcription factor 7-like 2, T-cell specific, HMG-box (Tcf7l2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 30538] [evidence IGI]; The process by which the anatomical structures of the hindgut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48619] [evidence IGI]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]	mTcf-4B; TCF4E; Tcf-4; mTcf-4E; Tcf4; TCF4B	mTcf-4B; TCF4E; Tcf-4; mTcf-4E; Tcf4; TCF4B
Mus musculus	RefSeq	ILMN_220992	ILMN_220992	AGK	NM_023538.1	NM_023538.1		69923	37537517	NM_023538.1	Agk	NP_076027.1	ILMN_2729605	001740382	S	2160	ACTAGTATTGTGTAAATATTGTTTAAAAATAAAAACTGTTTGATCATTCT	6	+	40346713-40346761	6qB1	Mus musculus acylglycerol kinase (Agk), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The process of introducing one or more phosphate groups into a lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents [goid 46834] [evidence IDA]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of a simple or complex lipid [goid 1727] [evidence IDA]; Catalysis of the reaction: ATP + ceramide = ADP + ceramide 1-phosphate [goid 1729] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the reaction: ATP + acylglycerol = ADP + acyl-sn-glycerol 3-phosphate [goid 47620] [evidence IEA]	AI465370; 2610037M15Rik; Mulk	AI465370; 2610037M15Rik; Mulk
Mus musculus	RefSeq	ILMN_199227	ILMN_199227	LOC217328	XM_203357.3	XM_203357.3			38091971	XM_203357.3	LOC217328		ILMN_2667190	006180685	S	2209	TAGCCCCAGGGAAAATGCCCACCCAGCTCGAAAGCGGCACAAGTAAAACA										
Mus musculus	RefSeq	ILMN_199227	ILMN_199227	LOC217328	XM_203357.3	XM_203357.3			38091971	XM_203357.3	LOC217328		ILMN_1248258	002760639	S	1211	AGGAGCTGAGGCAGATGCAAGGGTACAGCAAGCAGAGAGCACAGATTGGC										
Mus musculus	RefSeq	ILMN_201064	ILMN_201064	LOC384742	XM_357835.1	XM_357835.1			38088430	XM_357835.1	LOC384742		ILMN_1244139	005720445	S	220	CAGGGCATGGAACAGCATGAGTACATGGACCGGGCAAGGCAGTACAGGTA										
Mus musculus	RefSeq	ILMN_186826	ILMN_212753	RTL1	NM_184109.1	NM_184109.1		353326	46309584	NM_184109.1	Rtl1	NP_908998.1	ILMN_2438819	000450494	S	2803	CACTTTCCTTAATCCCAAGCAGCTCCAGTTTTGTGAACCATGCCGCTCCA	12	-	110830761-110830810	12qF1	Mus musculus retrotransposon-like 1 (Rtl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Mart1; Mar; Mor1; 6430411K18Rik	Mart1; Mar; Mor1; 6430411K18Rik
Mus musculus	RefSeq	ILMN_212753	ILMN_212753	RTL1	NM_184109.1	NM_184109.1		353326	46309584	NM_184109.1	Rtl1	NP_908998.1	ILMN_2629911	003440035	S	4993	ACCAGGAAGCGGTCACCTTCAGACCACGAAATCTTTTGGACCCAGAGGTC	12	-	110828571-110828620	12qF1	Mus musculus retrotransposon-like 1 (Rtl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Mart1; Mar; Mor1; 6430411K18Rik	Mart1; Mar; Mor1; 6430411K18Rik
Mus musculus	RefSeq	ILMN_208730	ILMN_318899	LOC100044087	XR_034194.1	XR_034194.1		100044087	149261355	XR_034194.1	LOC100044087		ILMN_1237846	006370592	S	333	TATACCAAAAAATTGGAGTTTGTTCGCTGTTAATTTCTTTGTGGGGTCAG	10	+	81685568-81685617		PREDICTED: Mus musculus similar to brain protein 44 (LOC100044087), misc RNA.					
Mus musculus	MEEBO	ILMN_186521	ILMN_186521	CHRNA3	scl35829.4_488				21553070	NM_145129	Chrna3		ILMN_1237262	003520593	S	1	CCTTATGGAAGGAGGCTGTCCTGGGTCTATTTAGGAAAAATGTCTGAATT						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IPI]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of communication from a neuron to a smooth muscle in the bladder that contributes to the expulsion of urine from the body [goid 60084] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence IMP]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of acetylcholine [goid 14056] [evidence IMP]; Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity [goid 7171] [evidence IMP]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IMP]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IMP]		
Mus musculus	RefSeq	ILMN_215313	ILMN_215313	FAAH	NM_010173.3	NM_010173.3		14073	142348835	NM_010173.3	Faah	NP_034303.2	ILMN_2657980	006100255	S	3688	GCCTACTGTTTGCCAGACACTTTACCAAAGGCTGCCAAGGTCCTTGCTCT	4	-	115669339-115669388	4qD1	Mus musculus fatty acid amide hydrolase (Faah), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]	AW412498	AW412498
Mus musculus	RefSeq	ILMN_215313	ILMN_215313	FAAH	NM_010173.3	NM_010173.3		14073	142348835	NM_010173.3	Faah	NP_034303.2	ILMN_2766930	000770328	S	2506	CCCTCATTCCACCTCTCTCTCTTCTGACTTGGCCTTTTTACTTCTCTAGC	4	-	115670521-115670570	4qD1	Mus musculus fatty acid amide hydrolase (Faah), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]	AW412498	AW412498
Mus musculus	RefSeq	ILMN_223138	ILMN_223138	OLFR1491	NM_146345.1	NM_146345.1		258342	22129607	NM_146345.1	Olfr1491	NP_666457.1	ILMN_1256579	002230500	S	630	GGTGCTGACAGTCCCATTCTTGCTTATCTTCATTTCCTATGTGTTCATTG	19	+	13779948-13779997	19qA	Mus musculus olfactory receptor 1491 (Olfr1491), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR266-8	MOR266-8
Mus musculus	RefSeq	ILMN_215622	ILMN_215622	SSBP2	NM_024186.1	NM_024186.1		66970	18859588	NM_024186.1	Ssbp2	NP_077148.1	ILMN_2693461	001780292	S	692	GAATTCAATACCCTACTCCTCAGCGTCTCCTGGGAATTACGTAGGTCCTC	13	+	92154874-92154877:92157921-92157956:92159450-92159459	13qC3	Mus musculus single-stranded DNA binding protein 2 (Ssbp2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW558684; A830008M03Rik; 1500004K09Rik; Hspc116; 9330163K02Rik; AU067692; SSDP2; 2310079I02Rik	AW558684; A830008M03Rik; 1500004K09Rik; Hspc116; 9330163K02Rik; AU067692; SSDP2; 2310079I02Rik
Mus musculus	RefSeq	ILMN_215622	ILMN_215622	SSBP2	NM_024186.1	NM_024186.1		66970	18859588	NM_024186.1	Ssbp2	NP_077148.1	ILMN_2693459	004250095	S	690	GCGAATTCAATACCCTACTCCTCAGCGTCTCCTGGGAATTACGTAGGTCC	13	+	92154872-92154877:92157921-92157956:92159450-92159457	13qC3	Mus musculus single-stranded DNA binding protein 2 (Ssbp2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW558684; A830008M03Rik; 1500004K09Rik; Hspc116; 9330163K02Rik; AU067692; SSDP2; 2310079I02Rik	AW558684; A830008M03Rik; 1500004K09Rik; Hspc116; 9330163K02Rik; AU067692; SSDP2; 2310079I02Rik
Mus musculus	MEEBO	ILMN_193480	ILMN_193480	6230415M23RIK	scl0109037.1_260						6230415M23Rik		ILMN_1241952	004670373	S	1	CTCTGACTGCCTGTGGCTGTTTCTGAGTTTTGTGCCTCTGTCCTACCAGA										
Mus musculus	MEEBO	ILMN_190147	ILMN_190147	9330133O14RIK	scl34227.2_115						9330133O14Rik		ILMN_2467588	003460377	S	14	CCAGAACCCTTGGATGAAATCTACCTCTCTACCAGTCTCTATGGTTACCC										
Mus musculus	RefSeq	ILMN_196754	ILMN_196754	KRTAP5-4	NM_015809.2	NM_015809.2		50775	114796632	NM_015809.2	Krtap5-4	NP_056624.1	ILMN_1259097	003850253	S	295	GGGGGCTGCAAGGGAGGCTGTTGTCAATCCAGTTGCTGTAAACCCTGCTG	7	+	149489701-149489750	7qF5	Mus musculus keratin associated protein 5-4 (Krtap5-4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_196754	ILMN_196754	KRTAP5-4	NM_015809.2	NM_015809.2		50775	114796632	NM_015809.2	Krtap5-4	NP_056624.1	ILMN_2817498	004570148	S	853	TCACACCACAGTTCACCAAAGACACCTCCAACATGGAGAGAAGTCTAGGG	7	+	149490259-149490308	7qF5	Mus musculus keratin associated protein 5-4 (Krtap5-4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212924	ILMN_212924	SUV39H2	NM_022724.2	NM_022724.2		64707	31543789	NM_022724.2	Suv39h2	NP_073561.2	ILMN_2973271	004230129	S	3995	CTCTTGAAGAATGATGTAGCCACTACAATCAATGCTGCCCGTTTTAATGC	2	-	3373301-3373350	2qA1	Mus musculus suppressor of variegation 3-9 homolog 2 (Drosophila) (Suv39h2), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IGI]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [pmid 11094092] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D030054H19Rik; D2Ertd544e; 4930507K23Rik; AA536750	D030054H19Rik; D2Ertd544e; 4930507K23Rik; AA536750
Mus musculus	Riken	ILMN_207377	ILMN_207377	GRTP1	ri|C330045E03|PX00667L13|AK082863|1418					AK082863	Grtp1		ILMN_1248487	002650343	S	1119	ATCCTGACCTGGTGCGGGCTGTGTGGACTGGTTCTGAGAGCTGCTGAATG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194828	ILMN_194828	LBR	scl000944.1_3				19527033	NM_133815	Lbr		ILMN_2509988	003780673	S	9	AGTCGCCGCTGGCTGCTGGTGACTGTCCTGGAGTGGCTGGAGTTCCCGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence TAS]; The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane [goid 5652] [evidence TAS]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194828	ILMN_194828	LBR	scl000944.1_3				19527033	NM_133815	Lbr		ILMN_2733120	004610630	S	3351	CCTGGTTCTGAAAGGGCGGACAGTGCCACAGTATCTGGACATTAGGTGCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence TAS]; The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane [goid 5652] [evidence TAS]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214575	ILMN_214575	6720487G11RIK	scl00319231.2_66	NM_175676.2			31342308	NM_175676.2	6720487G11Rik		ILMN_1222668	002000431	S	1918	GTATGTTGCCTGGTGACTAAAAGTAAAATATACCAGAGACAAACCAACCC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214575	ILMN_214575	6720487G11RIK	scl00319231.2_66	NM_175676.2			31342308	NM_175676.2	6720487G11Rik		ILMN_2649435	004060059	S	2725	GCTCCCTGCTGAATAGAAACCAGATAAGAGTAAGCAATGTGTGGTAAGTA								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214575	ILMN_214575	6720487G11RIK	scl00319231.2_66	NM_175676.2			31342308	NM_175676.2	6720487G11Rik		ILMN_2715518	003890722	S	1914	GATAGTATGTTGCCTGGTGACTAAAAGTAAAATATACCAGAGACAAACCA								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_241988	ILMN_241988	MTCP1	NM_001039373.3	NM_001039373.3		17763	146198671	NM_001039373.3	Mtcp1	NP_001034462.1	ILMN_3162682	004050041	I	947	ACATGGCAATCACTTCATTCACCACTGCCGTGCTCCCACCCTTAGGCCGG				XqA7.3	Mus musculus mature T-cell proliferation 1 (Mtcp1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]				
Mus musculus	RefSeq	ILMN_221516	ILMN_221516	GTF2F2	NM_026816.3	NM_026816.3		68705	142351202	NM_026816.3	Gtf2f2	NP_081092.1	ILMN_2736611	006280070	S	938	GCCTGCCTTGACAGGACAAAGACACCTGGGTCTACCACTCCTCTCAGTAA	14	-	76297223-76297272	14qD3	Mus musculus general transcription factor IIF, polypeptide 2 (Gtf2f2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A general transcription initiation factor which in humans consists of a heterodimer of an alpha and a beta subunit. Helps recruit RNA polymerase II to the initiation complex and promotes translation elongation [goid 5674] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI326315; 1110031C13Rik	AI326315; 1110031C13Rik
Mus musculus	RefSeq	ILMN_189832	ILMN_230618	GRIA3	NM_016886.2	NM_016886.2		53623	84781716	NM_016886.2	Gria3	NP_058582.2	ILMN_1251634	006980187	S	4896	AGTGTAAATTGCATGTGTGGGCATAATTACCGAACCTCATTGCCATGAGG	X	+	39031681-39031730	XqA3.3-qA4	Mus musculus glutamate receptor, ionotropic, AMPA3 (alpha 3) (Gria3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Glur-3; mKIAA4184; KIAA4184; Glur3; 2900064I19Rik	Glur-3; mKIAA4184; KIAA4184; Glur3; 2900064I19Rik
Mus musculus	RefSeq	ILMN_189832	ILMN_230618	GRIA3	NM_016886.2	NM_016886.2		53623	84781716	NM_016886.2	Gria3	NP_058582.2	ILMN_1238789	002970731	S	2419	AACAAATGGTGGTACGATAAGGGGGAATGTGGAGCCAAGGACTCCGGGAG	X	+	39022739-39022788	XqA3.3-qA4	Mus musculus glutamate receptor, ionotropic, AMPA3 (alpha 3) (Gria3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Glur-3; mKIAA4184; KIAA4184; Glur3; 2900064I19Rik	Glur-3; mKIAA4184; KIAA4184; Glur3; 2900064I19Rik
Mus musculus	RefSeq	ILMN_189832	ILMN_230618	GRIA3	NM_016886.2	NM_016886.2		53623	84781716	NM_016886.2	Gria3	NP_058582.2	ILMN_1223636	000990458	S	2644	GCCACCAACACTCAGAATTACGCTACATACAGAGAAGGCTACAACGTGTA	X	+	39025567-39025616	XqA3.3-qA4	Mus musculus glutamate receptor, ionotropic, AMPA3 (alpha 3) (Gria3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Glur-3; mKIAA4184; KIAA4184; Glur3; 2900064I19Rik	Glur-3; mKIAA4184; KIAA4184; Glur3; 2900064I19Rik
Mus musculus	RefSeq	ILMN_189832	ILMN_230618	GRIA3	NM_016886.2	NM_016886.2		53623	84781716	NM_016886.2	Gria3	NP_058582.2	ILMN_2638066	006900706	S	1788	CAACAATGAAGAACCTCGTGACCCACAAAGCCCTCCTGATCCTCCCAATG	X	+	38963345-38963394	XqA3.3-qA4	Mus musculus glutamate receptor, ionotropic, AMPA3 (alpha 3) (Gria3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Glur-3; mKIAA4184; KIAA4184; Glur3; 2900064I19Rik	Glur-3; mKIAA4184; KIAA4184; Glur3; 2900064I19Rik
Mus musculus	RefSeq	ILMN_217960	ILMN_217960	4732415M23RIK	NM_177279.3	NM_177279.3		320869	124301187	NM_177279.3	4732415M23Rik	NP_796253.2	ILMN_2962386	000240328	S	355	CAGCTACGGCATCCCCGACAACGATGAACAGAGAACCATTCGGGAGCATG				8qE1	Mus musculus RIKEN cDNA 4732415M23 gene (4732415M23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213686	ILMN_213686	LDHD	NM_027570.3	NM_027570.3		52815	34328378	NM_027570.3	Ldhd	NP_081846.3	ILMN_2639662	001580592	S	1923	TGGGCCGGCTCTTTGGTCACGTGAGCCCCGTTTGCAGCTGCATCCTTTCC	8	-	114150419-114150468	8qE1	Mus musculus lactate dehydrogenase D (Ldhd), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence NAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: (R)-lactate + 2 ferricytochrome c = pyruvate + 2 ferrocytochrome c [goid 4458] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Catalysis of the reaction: (R)-lactate + NAD+ = pyruvate + NADH + H+ [goid 8720] [evidence NAS]	D8Bwg1320e; 4733401P21Rik	D8Bwg1320e; 4733401P21Rik
Mus musculus	RefSeq	ILMN_213686	ILMN_213686	LDHD	NM_027570.3	NM_027570.3		52815	34328378	NM_027570.3	Ldhd	NP_081846.3	ILMN_2825080	001430689	S	1906	GTTCCATCCGGCACTGTTGGGCCGGCTCTTTGGTCACGTGAGCCCCGTTT	8	-	114150436-114150485	8qE1	Mus musculus lactate dehydrogenase D (Ldhd), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence NAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: (R)-lactate + 2 ferricytochrome c = pyruvate + 2 ferrocytochrome c [goid 4458] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Catalysis of the reaction: (R)-lactate + NAD+ = pyruvate + NADH + H+ [goid 8720] [evidence NAS]	D8Bwg1320e; 4733401P21Rik	D8Bwg1320e; 4733401P21Rik
Mus musculus	RefSeq	ILMN_213686	ILMN_213686	LDHD	NM_027570.3	NM_027570.3		52815	34328378	NM_027570.3	Ldhd	NP_081846.3	ILMN_2665629	006250010	S	1242	CGACCCAGATGATGCAGAGGAGCAGAGGAGGGTCAAGGCCTTTGCAGAAA	8	-	114151187-114151236	8qE1	Mus musculus lactate dehydrogenase D (Ldhd), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence NAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: (R)-lactate + 2 ferricytochrome c = pyruvate + 2 ferrocytochrome c [goid 4458] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Catalysis of the reaction: (R)-lactate + NAD+ = pyruvate + NADH + H+ [goid 8720] [evidence NAS]	D8Bwg1320e; 4733401P21Rik	D8Bwg1320e; 4733401P21Rik
Mus musculus	RefSeq	ILMN_219610	ILMN_219610	CTSK	NM_007802.3	NM_007802.3		13038	142352209	NM_007802.3	Ctsk	NP_031828.2	ILMN_2711163	006110204	S	1240	GGACACAACAGGGCATTTTTCTGAGAGTTGTGGACTCTGTGCTGGTAGAC	3	+	95313042-95313091	3qF2.1	Mus musculus cathepsin K (Ctsk), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	MMS10-Q; AI323530; catK; Ms10q	MMS10-Q; AI323530; catK; Ms10q
Mus musculus	RefSeq	ILMN_187448	ILMN_258109	F630110N24RIK	NM_028657.1	NM_028657.1		73822	89111936	NM_028657.1	F630110N24Rik	NP_082933.1	ILMN_1242469	006560240	S	1750	ACGTGGGAGAGATCACCTGGCTTACGGGGACACGGACACACGGGTCGGTA				10qC1	Mus musculus RIKEN cDNA F630110N24 gene (F630110N24Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	C19orf28; Wdt1; MGC148235	C19orf28; Wdt1; MGC148235
Mus musculus	RefSeq	ILMN_214064	ILMN_214064	INPP5E	NM_033134.2	NM_033134.2		64436	31981235	NM_033134.2	Inpp5e	NP_149125.1	ILMN_2820213	003800753	S	3212	ACCCCTTCAGACATAGCCTTGAATGTACAGACACCTAGGGGCATCCACTC	2	-	26252642-26252691	2qA3	Mus musculus inositol polyphosphate-5-phosphatase E (Inpp5e), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IDA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IDA]	72kDa; 1200002L24Rik; mKIAA0123	72kDa; 1200002L24Rik; mKIAA0123
Mus musculus	Riken	ILMN_201705	ILMN_201705	1700016B15RIK	ri|1700016B15|ZX00037M17|AK006012|734					AK006012	1700016B15Rik		ILMN_1242665	000780484	S	415	AGACAGCCATCTTCCCAGTCACATGATCGCCTGTTTTCCGCGTCCAGCCC										
Mus musculus	RefSeq	ILMN_221839	ILMN_221839	OLFR378	NM_147024.1	NM_147024.1		259026	22128892	NM_147024.1	Olfr378	NP_667235.1	ILMN_2741070	002710692	S	589	TTAGCAATATTTATTTTAGGGGGTCCTATAGTTGTACTCCCTTTCCTTCT	11	-	73238845-73238894	11qB4	Mus musculus olfactory receptor 378 (Olfr378), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR135-2; RP23-213I10.9	MOR135-2; RP23-213I10.9
Mus musculus	RefSeq	ILMN_214500	ILMN_244736	AKAP4	NM_001042542.1	NM_001042542.1		11643	110347482	NM_001042542.1	Akap4	NP_001036007.1	ILMN_2648635	002760138	S	56	GGCACTGCCCCCTTCCATCTAAAGGGGCACATCTCACTTCTGGGTGACAC	X	+	6645394-6645443	XqA1.1	Mus musculus A kinase (PRKA) anchor protein 4 (Akap4), transcript variant 2, mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IPI]	p82; Fsc1	p82; Fsc1
Mus musculus	Riken	ILMN_203607	ILMN_203607	A930013F09RIK	ri|A930013F09|PX00066C15|AK044441|1976					AK044441	A930013F09Rik		ILMN_1257689	005360088	S	1804	CTTTTCTCCTCACTGATCCTGGTTGTTTATCCTCTGGGGCTACAGGTGGC										
Mus musculus	RefSeq	ILMN_209706	ILMN_244972	PARP8	NM_001081009.1	NM_001081009.1		52552	124486597	NM_001081009.1	Parp8	NP_001074478.1	ILMN_2598402	004850424	S	2404	GCAGAAGGTGTCAAGCAAGGACGAGCCAGCTTCCAGTAGTAAAAGCAGCA	13	-	117653003-117653052	13qD2.3	Mus musculus poly (ADP-ribose) polymerase family, member 8 (Parp8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]	2810430O08Rik; D13Ertd275e	2810430O08Rik; D13Ertd275e
Mus musculus	RefSeq	ILMN_214047	ILMN_214047	RCSD1	NM_178593.3	NM_178593.3		226594	84781799	NM_178593.3	Rcsd1	NP_848708.2	ILMN_3071366	006400255	I	309	ACCAGCCAGTAAGCCAACAAGAAGGAAACCACCTTGCTCCCTCCCCCTGT	1	-	167593734-167593783	1qH2.3	Mus musculus RCSD domain containing 1 (Rcsd1), transcript variant 1, mRNA.				A430105K13Rik; BC025872; MGC32399	A430105K13Rik; BC025872; MGC32399
Mus musculus	RefSeq	ILMN_214047	ILMN_214047	RCSD1	NM_178593.3	NM_178593.3		226594	84781799	NM_178593.3	Rcsd1	NP_848708.2	ILMN_1250704	006590296	S	2543	GTATCCTGTCCGGGGATAAAACAGGGTTTGCAGGAATATGGGTCGGTCTG	1	-	167579153-167579202	1qH2.3	Mus musculus RCSD domain containing 1 (Rcsd1), transcript variant 1, mRNA.				A430105K13Rik; BC025872; MGC32399	A430105K13Rik; BC025872; MGC32399
Mus musculus	RefSeq	ILMN_196480	ILMN_252837	PARC	NM_001081335.1	NM_001081335.1		78309	124486736	NM_001081335.1	Parc	NP_001074804.1	ILMN_1251962	004920653	S	4211	GAATTTTGCCGATCGCTTTCTCCCTGATGACGAGGCCGCCCAAGCACTGG	17	-	46658856-46658905	17qC	Mus musculus p53-associated parkin-like cytoplasmic protein (Parc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	1810035I07Rik; mKIAA0708	1810035I07Rik; mKIAA0708
Mus musculus	RefSeq	ILMN_215195	ILMN_252837	PARC	NM_001081335.1	NM_001081335.1		78309	124486736	NM_001081335.1	Parc	NP_001074804.1	ILMN_2656614	005050280	S	7602	TTTGATGAGGAACTAGACAATGATAGCTTCTCCTACGACGAGGAGTCTGA	17	-	46637720-46637769	17qC	Mus musculus p53-associated parkin-like cytoplasmic protein (Parc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	1810035I07Rik; mKIAA0708	1810035I07Rik; mKIAA0708
Mus musculus	RefSeq	ILMN_198177	ILMN_252837	PARC	NM_001081335.1	NM_001081335.1		78309	124486736	NM_001081335.1	Parc	NP_001074804.1	ILMN_1233070	000870377	S	1327	TCCTGGATGACTACGAGGAGATCAGTGCTGGGGACGAGGGCGAGTTCCAG	17	-	46677217-46677266	17qC	Mus musculus p53-associated parkin-like cytoplasmic protein (Parc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	1810035I07Rik; mKIAA0708	1810035I07Rik; mKIAA0708
Mus musculus	MEEBO	ILMN_190230	ILMN_190230	JMJD2A	scl23922.21.1_16				33859780	NM_172382	Jmjd2a		ILMN_2468327	006580377	S	2	CTCGCAGCTGGTGGTTAAGAGAGATGATGTATACACACTCGATGAAGAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217774	ILMN_217774	TRA2A	NM_198102.2	NM_198102.2		101214	111160868	NM_198102.2	Tra2a	NP_932770.2	ILMN_2857086	005490204	S	1234	GGGAGCCCGGGTTCTGCTTTGTGGTTCTTCTTTGCCTTTACAGAGGATTG	6	-	49194464-49194513	6qB2.3	Mus musculus transformer 2 alpha homolog (Drosophila) (Tra2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	mAWMS1; 1500010G04Rik; G430041M01Rik; AL022798	mAWMS1; 1500010G04Rik; G430041M01Rik; AL022798
Mus musculus	RefSeq	ILMN_198726	ILMN_255176	EG238829	NM_001013760.2	NM_001013760.2		238829	142377390	NM_001013760.2	EG238829	NP_001013782.1	ILMN_1232147	003190113	S	762	GCCATAGGCAAGGTGCCCCATTCCAAAATGTAAATCTCTACCTTACATAG	X	+	73512764-73512796:73512797-73512813	XqA7.3	Mus musculus predicted gene, EG238829 (EG238829), mRNA.					
Mus musculus	Riken	ILMN_207384	ILMN_207384	GTAR-PENDING	ri|C530022F07|PX00669E23|AK082956|3201					AK082956	Gtar-pending		ILMN_1243098	003140433	S	2863	ACTTCATCCAGCAAAGGCCACACCACCTGACCCCTCTCAAGAAGCACTGC										
Mus musculus	RefSeq	ILMN_214135	ILMN_214135	STXBP1	NM_009295.1	NM_009295.1		20910	6678178	NM_009295.1	Stxbp1	NP_033321.1	ILMN_1244619	001300446	S	1657	CCTTGGGGGTGTGAGCCTGAATGAGATGCGCTGTGCTTACGAAGTGACCC	2	-	32651566-32651615	2qB	Mus musculus syntaxin binding protein 1 (Stxbp1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IMP]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IMP]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32229] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence ISO]	nsec1; Rb-sec1; AI317162; Sxtbp1; Munc-18a; AI326233; Ms10g; N-sec1; MMS10-G; Unc18h; Munc18-1	nsec1; Rb-sec1; AI317162; Sxtbp1; Munc-18a; AI326233; Ms10g; N-sec1; MMS10-G; Unc18h; Munc18-1
Mus musculus	RefSeq	ILMN_214135	ILMN_214135	STXBP1	NM_009295.1	NM_009295.1		20910	6678178	NM_009295.1	Stxbp1	NP_033321.1	ILMN_2698474	000010672	S	1664	GGGTGTGAGCCTGAATGAGATGCGCTGTGCTTACGAAGTGACCCAGGCCA	2	-	32651559-32651608	2qB	Mus musculus syntaxin binding protein 1 (Stxbp1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IMP]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IMP]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32229] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence ISO]	nsec1; Rb-sec1; AI317162; Sxtbp1; Munc-18a; AI326233; Ms10g; N-sec1; MMS10-G; Unc18h; Munc18-1	nsec1; Rb-sec1; AI317162; Sxtbp1; Munc-18a; AI326233; Ms10g; N-sec1; MMS10-G; Unc18h; Munc18-1
Mus musculus	RefSeq	ILMN_214135	ILMN_214135	STXBP1	NM_009295.1	NM_009295.1		20910	6678178	NM_009295.1	Stxbp1	NP_033321.1	ILMN_2644632	001260400	S	3325	CAGTGTTTAAAGTATGGAAGCACAACCGTGTACCGCTCTGTACCGTCCTG	2	-	32643520-32643569	2qB	Mus musculus syntaxin binding protein 1 (Stxbp1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IMP]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IMP]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32229] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence ISO]	nsec1; Rb-sec1; AI317162; Sxtbp1; Munc-18a; AI326233; Ms10g; N-sec1; MMS10-G; Unc18h; Munc18-1	nsec1; Rb-sec1; AI317162; Sxtbp1; Munc-18a; AI326233; Ms10g; N-sec1; MMS10-G; Unc18h; Munc18-1
Mus musculus	RefSeq	ILMN_220353	ILMN_246109	OLFR148	NM_146505.1	NM_146505.1		258498	22203774	NM_146505.1	Olfr148	NP_666716.1	ILMN_2720983	006900392	S	460	GCCACCATCTTGACCTCTTTAACCTTTCAATTAGTCTACTGTGCATCCAA	9	+	39421613-39421662	9qA5.1	Mus musculus olfactory receptor 148 (Olfr148), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR224-4; M30	MOR224-4; M30
Mus musculus	RefSeq	ILMN_211772	ILMN_211772	ATF3	NM_007498.2	NM_007498.2		11910	31542153	NM_007498.2	Atf3	NP_031524.2	ILMN_2619408	001090438	S	1629	GGTGTAGGACTCCATACTCAGTGACAGGGCAGGAAGAGCCAAAGATAACC	1	-	192994473-192994522	1qH6	Mus musculus activating transcription factor 3 (Atf3), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	LRG-21	LRG-21
Mus musculus	RefSeq	ILMN_199613	ILMN_227418	LOC624619	XM_889164.2	XM_889164.2		624619	94395609	XM_889164.2	LOC624619	XP_894257.2	ILMN_1251361	002070068	S	907	GACACGCCTTCCACCTTGGACGCCTATGTGTTCGGTTTCCTTGCGCCTCT	13	+	93948642-93948646:93949671-93949715	13qC3	PREDICTED: Mus musculus similar to metaxin 3 (LOC624619), mRNA.					
Mus musculus	Riken	ILMN_204611	ILMN_204611	6720467J09RIK	ri|6720467J09|PX00060C13|AK032886|3192					AK032886	6720467J09Rik		ILMN_2566312	006960603	S	2800	CACCAATTGTGAGAAATAATGATCGTGCCACCGTGCTGCTCCGCAGTGAG										
Mus musculus	MEEBO	ILMN_223491	ILMN_223491	DXIMX39E	scl0002955.1_15	XM_125370.1			20983021	XM_125370.1	DXImx39e		ILMN_2764759	005670403	S	221	GTGCACTGGTAGTGGTGGTGGCCCTCGGGGTGCTGGTGTGGGCTGCTGAA										
Mus musculus	RefSeq	ILMN_210706	ILMN_210706	KLRC3	NM_021378.1	NM_021378.1		58179	10946713	NM_021378.1	Klrc3	NP_067353.1	ILMN_2608368	005810678	S	307	GCTCTTTGTCCAAAGGAATGGATCTTATATTCTCACAATTGTTATTACAT	6	-	129591504-129591553	6qF3	Mus musculus killer cell lectin-like receptor subfamily C, member 3 (Klrc3), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Nkg2e	Nkg2e
Mus musculus	RefSeq	ILMN_193980	ILMN_193980	UTF1	NM_009482.2	NM_009482.2		22286	118130372	NM_009482.2	Utf1	NP_033508.1	ILMN_2502226	006760154	S	796	CAGGGCCGTGCTTCTTCCCCGCAGGTTGCTCCCCAGTCGTTGAATACCGC	7	+	147130647-147130696	7qF4	Mus musculus undifferentiated embryonic cell transcription factor 1 (Utf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI505934	AI505934
Mus musculus	RefSeq	ILMN_212174	ILMN_238313	SPRR2H	NM_011474.3	NM_011474.3		20762	142352554	NM_011474.3	Sprr2h	NP_035604.1	ILMN_2623615	006770204	S	658	CACCCAGGACATTTTTCAAATCTTTCTGACATTTTGCCATAGTAGTGGTC	3	+	92191152-92191201	3qF1	Mus musculus small proline-rich protein 2H (Sprr2h), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AI661967	AI661967
Mus musculus	RefSeq	ILMN_216910	ILMN_216910	OLFR1	NM_146921.1	NM_146921.1		258923	22129048	NM_146921.1	Olfr1	NP_667132.1	ILMN_1255360	005960424	S	606	GGCCAGCATCTTTCTTGTCCTTCCATTTGCACTCATTACCATGTCCTATG	11	-	73208867-73208916	11qB4	Mus musculus olfactory receptor 1 (Olfr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	I7; I54; MOR135-13; RP23-213I10.7	I7; I54; MOR135-13; RP23-213I10.7
Mus musculus	RefSeq	ILMN_209551	ILMN_209551	LYN	NM_010747.1	NM_010747.1		17096	33859587	NM_010747.1	Lyn	NP_034877.1	ILMN_2596887	006900220	S	3333	CATGGAAAGGAAGTGCGAAGAATCCTTAAAGAAATCACTAAAACATTGCT	4	+	3718703-3718752	4qA1	Mus musculus Yamaguchi sarcoma viral (v-yes-1) oncogene homolog (Lyn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 42531] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [evidence IDA]; The chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 42541] [evidence TAS]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence TAS]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with the erythropoietin receptor [goid 5128] [evidence TAS]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hck-2; AA407514	Hck-2; AA407514
Mus musculus	RefSeq	ILMN_230946	ILMN_230946	ARMCX5	NM_001009575.2	NM_001009575.2		494468	85662390	NM_001009575.2	Armcx5	NP_001009575.2	ILMN_3001013	006560066	S	2416	TGACCAGAAACTCCAAGACTTAACAGACCACAGTGACCCTGATGTGAGAG	X	+	131093282-131093331		Mus musculus armadillo repeat containing, X-linked 5 (Armcx5), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AW556585; MGC38735	AW556585; MGC38735
Mus musculus	Riken	ILMN_205147	ILMN_205147	9930029B02RIK	ri|9930029B02|PX00120I05|AK036946|4344					AK036946	9930029B02Rik		ILMN_2570342	002900176	S	3529	CCTGCATGAGTAAGACAAGGGCCTGCTCACATGGAACTTAACATTCGAGG										
Mus musculus	MEEBO	ILMN_216211	ILMN_216211	BRADNM8	scl0003104.1_69				487850	L31395	BraDnm8		ILMN_1224127	002940601	S	1282	GCCCAGTATCAAGTGTGTGGACATGGTAGTCAGTGAACTCACGTCCACCA										
Mus musculus	RefSeq	ILMN_190260	ILMN_231053	GGPS1	NM_010282.2	NM_010282.2		14593	47271502	NM_010282.2	Ggps1	NP_034412.1	ILMN_2621613	002970195	S	216	AAACATGGAGAAAACTAAAGAGAAAGCTGAGAGGATTCTTCTAGAGCCCT	13	-	14150086-14150132:14150133-14150135	13qA1	Mus musculus geranylgeranyl diphosphate synthase 1 (Ggps1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate [goid 4161] [evidence IEA]; Catalysis of the reaction: trans,trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate [goid 4311] [evidence IEA]; Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = diphosphate + trans,trans-farnesyl diphosphate [goid 4337] [evidence IDA]	1810026C22Rik; AI843169; 9530089B04Rik; C79210	1810026C22Rik; AI843169; 9530089B04Rik; C79210
Mus musculus	RefSeq	ILMN_190260	ILMN_231053	GGPS1	NM_010282.2	NM_010282.2		14593	47271502	NM_010282.2	Ggps1	NP_034412.1	ILMN_1237585	003120524	S	921	GCGCCAGAGAACAGAGAATATAGATATTAAAAAGTATTGTGTGCAGTACC	13	-	14146112-14146161	13qA1	Mus musculus geranylgeranyl diphosphate synthase 1 (Ggps1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate [goid 4161] [evidence IEA]; Catalysis of the reaction: trans,trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate [goid 4311] [evidence IEA]; Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = diphosphate + trans,trans-farnesyl diphosphate [goid 4337] [evidence IDA]	1810026C22Rik; AI843169; 9530089B04Rik; C79210	1810026C22Rik; AI843169; 9530089B04Rik; C79210
Mus musculus	RefSeq	ILMN_206598	ILMN_242696	EG667598	XM_991392.1	XM_991392.1		667598	94378120	XM_991392.1	EG667598	XP_996486.2	ILMN_1247293	006590553	S	426	CTGCGCTGGCATTGGAACCTACTTCTTTGGGATTTCAGCAGATACAGGAG	6	-	128423492-128423541	6qF3	PREDICTED: Mus musculus predicted gene, EG667598 (EG667598), mRNA.					
Mus musculus	RefSeq	ILMN_204510	ILMN_242696	EG667598	XM_991392.1	XM_991392.1		667598	94378120	XM_991392.1	EG667598	XP_996486.2	ILMN_1240960	002470180	S	171	GACTAGGTGAGGGAGGGAGGAGAAGGAGGAGTCAAGCAGAGTCCAACCCA	6	-	128423747-128423796	6qF3	PREDICTED: Mus musculus predicted gene, EG667598 (EG667598), mRNA.					
Mus musculus	RefSeq	ILMN_209384	ILMN_209384	HTR5B	NM_010483.2	NM_010483.2		15564	24475921	NM_010483.2	Htr5b	NP_034613.1	ILMN_2595319	003310376	S	1906	GCGGGCCTCACCTGAAGCTTTGATAAAACGTGTTCCACGCAGGTGTCTTC	1	-	123406398-123406447	1qE2.3	Mus musculus 5-hydroxytryptamine (serotonin) receptor 5B (Htr5b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence IDA]	MGC141198; 5-Ht5b	MGC141198; 5-Ht5b
Mus musculus	RefSeq	ILMN_186213	ILMN_241551	ZFP521	NM_145492.3	NM_145492.3		225207	146149342	NM_145492.3	Zfp521	NP_663467.1	ILMN_2503811	005050520	S	2090	GCACGTGACCATCCACTTTATGATCACCTCAACCTACTACATCTGTGAGA				18qA1	Mus musculus zinc finger protein 521 (Zfp521), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	B930086A16Rik; Evi3	B930086A16Rik; Evi3
Mus musculus	RefSeq	ILMN_192948	ILMN_239544	V1RD22	NM_207548.1	NM_207548.1		404291	46430547	NM_207548.1	V1rd22	NP_997431.1	ILMN_2492830	000240411	S	702	CAGAGCAGCATACACAATTCTCATGCTGGTGATCACATTTGTATGCTTTT	7	+	24539631-24539680	7qA3	Mus musculus vomeronasal 1 receptor, D22 (V1rd22), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_205990	ILMN_205990	D430050F21RIK	ri|D430050F21|PX00196C21|AK052550|1198					AK052550	D430050F21Rik		ILMN_2576711	002940719	S	455	GAACCGGTCACGTAATCAAGATGATCAAGGCCATTTCTGAGGTCGTTGTC										
Mus musculus	RefSeq	ILMN_219648	ILMN_219648	OLFR1033	NM_146578.2	NM_146578.2		258571	84697029	NM_146578.2	Olfr1033	NP_666789.1	ILMN_2711788	001010025	S	853	GCAGGCATTAACTTCACATATTCCTTGATTGTTGTCATCATCTCCTACCT	2	+	85882075-85882124	2qD	Mus musculus olfactory receptor 1033 (Olfr1033), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR199-2	MOR199-2
Mus musculus	Riken	ILMN_206747	ILMN_206747	VCAM1	ri|D630011E21|PX00196I06|AK085320|4127					AK085320	Vcam1		ILMN_1241993	004640577	S	3752	GCCAGCCAGCTATGCATCCTCAGGACAATTCAAGCATCTTCAGGCAGGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_231220	ILMN_231220	5330417C22RIK	NM_001033304.1	NM_001033304.1		229722	85701809	NM_001033304.1	5330417C22Rik	NP_001028476.1	ILMN_3160472	002000438	S	2961	AGACGTCTTCAGGAGGCCCAGACATGGACATGTGAGAGGTGCCCGTCCTG	3	-	108261302-108261317:108261318-108261351	3qF3	Mus musculus RIKEN cDNA 5330417C22 gene (5330417C22Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA1324; BB183350; KIAA1324	mKIAA1324; BB183350; KIAA1324
Mus musculus	Riken	ILMN_206879	ILMN_206879	ALDH1A3	ri|D930050B08|PX00204C04|AK086764|1067					AK086764	Aldh1a3		ILMN_1235590	002120189	S	38	CAGGGATGTTCCAGGAGATACTAGCTCCAGCTGCCTGGTGCCTAGCTACA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IGI]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina [goid 2072] [evidence IGI]; The progression of the nucleus accumbens over time from its initial formation until its mature state. The nucleus accumbens is a collection of pleomorphic cells in the caudal part of the anterior horn of the lateral ventricle, in the region of the olfactory tubercle, lying between the head of the caudate nucleus and the anterior perforated substance. It is part of the ventral striatum, a composite structure considered part of the basal ganglia [goid 21768] [evidence IMP]; The biological process whose specific outcome is the progression of the olfactory pit from an initial condition to its mature state. This process begins with the formation of the olfactory pit, which is an indentation of the olfactory placode, and ends when the pits hollows out to form the nasopharynx [goid 60166] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222422	ILMN_222422	THEG	NM_011583.3	NM_011583.3		21830	93004090	NM_011583.3	Theg	NP_035713.1	ILMN_2749394	002190563	S	481	GGGGCGCTGTTGTAAGGGCTATGCCTGGATTTCCCCACGCAAGACCAACT	10	-	79048667-79048716	10qC1	Mus musculus testicular haploid expressed gene (Theg), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216936	ILMN_222422	THEG	NM_011583.3	NM_011583.3		21830	93004090	NM_011583.3	Theg	NP_035713.1	ILMN_2677161	001230025	S	1167	CCACCCCCAAATACATCACCAAGAAAGTGTGACAACCAAGCCTTCTCTCC	10	-	79039254-79039272:79039273-79039303	10qC1	Mus musculus testicular haploid expressed gene (Theg), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218229	ILMN_218229	ASPM	NM_009791.4	NM_009791.4		12316	90093357	NM_009791.4	Aspm	NP_033921.3	ILMN_2693205	004780193	S	9561	GGAATTATGCCAATCATGGATACCTGGAGCAGTTTTTACTGTCAGTGTAA	1	+	141390360-141390409	1qF	Mus musculus asp (abnormal spindle)-like, microcephaly associated (Drosophila) (Aspm), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of asymmetric cell division [goid 45769] [evidence IMP]; Any process by which a centrosome is maintained in a specific location within a cell and prevented from moving elsewhere [goid 51661] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; The division of a neuroblast located in the forebrain. Neuroblast division gives rise to at least another neuroblast. As in, but not restricted to, the vertebrates (Vertebrata, ncbi_taxonomy_id:7742) [goid 21873] [evidence IMP]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Sha1; FLJ10518; Calmbp1; MCPH5; D330028K02Rik	Sha1; FLJ10518; Calmbp1; MCPH5; D330028K02Rik
Mus musculus	RefSeq	ILMN_218314	ILMN_218314	OLFR539	NM_146961.1	NM_146961.1		258963	22129000	NM_146961.1	Olfr539	NP_667172.1	ILMN_1253441	002000685	S	614	GCATTCTGACTCTTGTGGCAGATGCCTTTTTTGTAGGCATCAACTTCATG	7	+	147853801-147853850	7qF5	Mus musculus olfactory receptor 539 (Olfr539), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR253-4	MOR253-4
Mus musculus	Riken	ILMN_203780	ILMN_203780	A230050N15RIK	ri|A230050N15|PX00128K19|AK038617|1417					AK038617	A230050N15Rik		ILMN_1252935	004560438	S	1087	GCCTTGGTATCAGTCTTCACCTTCCACCTTGTTTGAGTCCCGAGTCCGGG										
Mus musculus	MEEBO	ILMN_213790	ILMN_213790	RAPL	scl000776.1_76				32477996	AY261333	Rapl		ILMN_1216726	005690097	S	72	GTCCGATGAGCTCAGACTCGGGCGGGGCCCAATGACCGTGGACAGCAGCA										
Mus musculus	RefSeq	ILMN_215800	ILMN_215800	ANKMY2	NM_146033.2	NM_146033.2		217473	46849740	NM_146033.2	Ankmy2	NP_666145.2	ILMN_2663741	000010392	S	2267	CTGCATTTTCAGTGTCGGGGCATGTAAGCAAAGCTGGAGTGTCCTGTCTC	12	+	36923765-36923814	12qA3	Mus musculus ankyrin repeat and MYND domain containing 2 (Ankmy2), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC18754; AI035571; ZMYND20	MGC18754; AI035571; ZMYND20
Mus musculus	MEEBO	ILMN_214691	ILMN_214691	SNED1	scl17628.21.95_79				40254324	NM_172463	Sned1		ILMN_2772334	004860195	S	3053	GCCTTAGCAGCCGGCCGCGCCTACAATATCTCCGTTTTCTCAGTCAAGAG							The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222393	ILMN_222393	AB041550	NM_021418.1	NM_021418.1		58229	10946781	NM_021418.1	AB041550	NP_067393.1	ILMN_2748981	005340255	S	1786	GGAGCTTAAAAGCTGAGAAAATAGGAACAGTATGGGCAAAGCCTTCAGGG	6	+	87683781-87683830	6qD1	Mus musculus hypothetical protein, MNCb-4779 (AB041550), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	Riken	ILMN_202554	ILMN_202554	RDGB2	ri|4930413D18|PX00029L02|AK015126|1669					AK015126	Rdgb2		ILMN_2550497	000110470	S	1478	CCAGCGTGGAGCAGCTGAACATCATCGAGAAAAAAACTAAGACCTACAAG										
Mus musculus	Riken	ILMN_203480	ILMN_203480	6430574F24RIK	ri|6430574F24|PX00047F05|AK032509|3474					AK032509	6430574F24Rik		ILMN_1216924	000160438	S	3376	ATCAGGTGTTACAGAGACAGGGGAGGATGAGGAGGGGAAGAATGTAAAGG										
Mus musculus	MEEBO	ILMN_186160	ILMN_186160	B230112P13RIK	scl6307.1.1_179						B230112P13Rik		ILMN_2433119	003190221	S	16	TGACGCTCCATCCTGAGCTGCTCCCATCTGTTTCTAATGAAGTCATCCAC										
Mus musculus	RefSeq	ILMN_214661	ILMN_214661	HOXD11	NM_008273.1	NM_008273.1		15431	6680256	NM_008273.1	Hoxd11	NP_032299.1	ILMN_1231215	006200669	S	618	TGACAAGGGCGACCCCAAGCCAGGGGCTGGTGGCGGCGGGGGCAGTCCCT	2	+	74521067-74521116	2qC3	Mus musculus homeo box D11 (Hoxd11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; Branching of the ureteric bud [goid 1658] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hox-5.4; Hox-4.6	Hox-5.4; Hox-4.6
Mus musculus	MEEBO	ILMN_224078	ILMN_224078	IFIT1	scl53191.3_226				6680360	NM_008331	Ifit1		ILMN_2774340	001780142	S	2046	TTATATGCTAAAAGTATTCATTGAAAGTGACCAAAATAGTTAAAGCCAAA								The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_260777	ILMN_260777	BC099439	NM_001025564.1	NM_001025564.1		217066	70909328	NM_001025564.1	BC099439	NP_001020735.1	ILMN_2993962	001710687	S	586	TGATGAGGACCCTGCTAATGAACCACTTTCCAATGAGGACCCCGCTAATG	11	-	88780931-88780980	11qC	Mus musculus cDNA sequence BC099439 (BC099439), mRNA.					
Mus musculus	RefSeq	ILMN_208730	ILMN_208730	BRP44	NM_027430.2	NM_027430.2		70456	141803058	NM_027430.2	Brp44	NP_081706.1	ILMN_2672349	000050240	S	442	TCAAGATATTCACTTGTAATTATACCAAAAAATTGGAGTTTGTTCGCTGT	1	+	167409609-167409658	1qH2.3	Mus musculus brain protein 44 (Brp44), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			ESTM43; 2610205H19Rik; 2010002I07Rik; AA108335; 0610006C01Rik	ESTM43; 2610205H19Rik; 2010002I07Rik; AA108335; 0610006C01Rik
Mus musculus	RefSeq	ILMN_220210	ILMN_220210	AB124611	NM_206536.1	NM_206536.1		382062	45504366	NM_206536.1	AB124611	NP_996259.1	ILMN_2719139	000050132	S	264	GAACTTCTGCTGTCAATATGGTGTGATGGGTGAGCACAGTCAGCCCCAGC	9	+	21333439-21333488	9qA3	Mus musculus cDNA sequence AB124611 (AB124611), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm1706	Gm1706
Mus musculus	RefSeq	ILMN_198203	ILMN_246901	LOC639341	XM_915736.3	XM_915736.3		639341	149254380	XM_915736.3	LOC639341	XP_920829.2	ILMN_1247390	004760706	S	632	GCGACATCTTGATAGGTAAATTCGTGAAGCACACCAGAGGCGACGGGTCC					PREDICTED: Mus musculus similar to putative (LOC639341), mRNA.					
Mus musculus	RefSeq	ILMN_214923	ILMN_214923	HSD3B5	NM_008295.2	NM_008295.2		15496	113680666	NM_008295.2	Hsd3b5	NP_032321.2	ILMN_1234449	006450746	S	1373	CTGGCCCAGTCACACACCATCAGTCCTAAGCACTTGCCCAGTAATGCACA	3	-	98422743-98422792	3qF2.2	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5 (Hsd3b5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217991	ILMN_217991	R3HDM2	NM_027900.3	NM_027900.3		71750	76559939	NM_027900.3	R3hdm2	NP_082176.3	ILMN_2690203	002120524	S	4047	GACAGACACAGTATTTAATTGCACATACAGATGTTTGCTGGGTTCACTGT	10	+	126936277-126936326	10qD3	Mus musculus R3H domain containing 2 (R3hdm2), mRNA. XM_899252 XM_899263 XM_899266 XM_899270 XM_899277 XM_899286 XM_907380 XM_920311 XM_920324 XM_920334 XM_920346 XM_920357 XM_920367 XM_920384 XM_920392 XM_920401 XM_920409 XM_920417 XM_920428 XM_920439 XM_920447	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AU041262; MGC144089; 1300003K24Rik; mKIAA1002	AU041262; MGC144089; 1300003K24Rik; mKIAA1002
Mus musculus	RefSeq	ILMN_196399	ILMN_196399	1600019C01RIK	XM_135476.1	XM_135476.1			20957709	XM_135476.1	1600019C01Rik		ILMN_1227326	001260343	S	1247	GGTGATCAACAGGAAACTCAGGTCCCGTAGTCTGTCCCAGGCTTGACTAA										
Mus musculus	RefSeq	ILMN_221636	ILMN_257600	PLD6	NM_183139.2	NM_183139.2		194908	124358941	NM_183139.2	Pld6	NP_898962.2	ILMN_2738208	003850035	S	1083	TAGTGGATCAGAAGCTGACGACAAAGGGAACCCTGGAGGTAAGCAGGCTG	11	-	59598031-59598080	11qB1.3	Mus musculus phospholipase D family, member 6 (Pld6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [evidence IEA]	Gm10; RP23-180B18.2	Gm10; RP23-180B18.2
Mus musculus	Riken	ILMN_203021	ILMN_203021	EP	ri|6030422N11|PX00056M08|AK031397|3197					AK031397	ep		ILMN_1228017	007040136	S	2973	TAGTGAGCCTACGTTTGGGCCTGACACCTAAGCAGGTGATGTCAGAGCTC										
Mus musculus	RefSeq	ILMN_215889	ILMN_215889	SLC25A20	NM_020520.2	NM_020520.2		57279	31343320	NM_020520.2	Slc25a20	NP_065266.1	ILMN_3061070	005360408	I	133	TGGCAGACGAGCCGAAACCCATCAGTCCGTTTAAGAACCTCCTGGCTGGC	9	+	108519634-108519683	9qF2	Mus musculus solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20 (Slc25a20), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1110007P09Rik; Cact; C78826; mCAC	1110007P09Rik; Cact; C78826; mCAC
Mus musculus	RefSeq	ILMN_215889	ILMN_215889	SLC25A20	NM_020520.2	NM_020520.2		57279	31343320	NM_020520.2	Slc25a20	NP_065266.1	ILMN_3138499	001090037	A	1448	GTCTCTGGTGCCATCCATATACTCCTGGCTGTGCATGGGATGTGGGTGTG	9	+	108541710-108541759	9qF2	Mus musculus solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20 (Slc25a20), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1110007P09Rik; Cact; C78826; mCAC	1110007P09Rik; Cact; C78826; mCAC
Mus musculus	RefSeq	ILMN_221879	ILMN_221879	LY6I	NM_020498.1	NM_020498.1		57248	21356650	NM_020498.1	Ly6i	NP_065244.1	ILMN_2741556	005810672	S	526	GCCCTGATGAAATTGAAAAGAAGTTTATCCTGGATCCTAACACCAAGATG	15	-	74810466-74810515	15qD3	Mus musculus lymphocyte antigen 6 complex, locus I (Ly6i), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]			AI789751; Ly-6I; Ly-6M	AI789751; Ly-6I; Ly-6M
Mus musculus	RefSeq	ILMN_200220	ILMN_200220	LOC385976	XM_359021.1	XM_359021.1			38080985	XM_359021.1	LOC385976		ILMN_1238059	004810092	S	44	GCTACTTGTCATCATCAGAACCCAGTTCTCCCAGCACAGTGAGTCCTGGT										
Mus musculus	RefSeq	ILMN_198179	ILMN_318915	LOC100047904	XM_001479405.1	XM_001479405.1		100047904	149269369	XM_001479405.1	LOC100047904	XP_001479455.1	ILMN_1224584	001710040	S	1240	ACCACGGGGACGTGCCACCCGTTAACTCCCAACAGGTCCCAGGAAACTTA					PREDICTED: Mus musculus similar to trem-like transcript 2, transcript variant 1 (LOC100047904), mRNA.					
Mus musculus	RefSeq	ILMN_222719	ILMN_222719	DNAJC14	NM_028873.3	NM_028873.3		74330	142366323	NM_028873.3	Dnajc14	NP_083149.2	ILMN_2753843	002370594	S	4117	CTGCCTTTACCTTCTTGCTTTCTTTTGGGACTGTAAAATCACTTGGCTTT	10	+	128256390-128256439	10qD3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 14 (Dnajc14), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DNAJ; LIP6; HDJ3; DRIP78; 5730551F12Rik	DNAJ; LIP6; HDJ3; DRIP78; 5730551F12Rik
Mus musculus	RefSeq	ILMN_210798	ILMN_210798	FABP3	NM_010174.1	NM_010174.1		14077	6753809	NM_010174.1	Fabp3	NP_034304.1	ILMN_2887630	001170468	S	363	CAGTGTGGTGAGCACTCGGACTTATGAGAAGGAGGCGTGACCTGGCTGCT	4	+	129992430-129992469:129992470-129992479	4qD2.2	Mus musculus fatty acid binding protein 3, muscle and heart (Fabp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IGI]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Mdgi; Fabph4; Fabph-1; Fabph-4; H-FABP; Fabph1	Mdgi; Fabph4; Fabph-1; Fabph-4; H-FABP; Fabph1
Mus musculus	Riken	ILMN_201721	ILMN_201721	HBB-B1	ri|1600013K09|ZX00042O10|AK005442|628					AK005442	Hbb-b1		ILMN_2544056	001570546	S	537	GTTCCCAAGAGAGCATCTGTCAGTTGTTGGCAAAATGATAAAGACATTTG						An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IMP]		
Mus musculus	RefSeq	ILMN_221383	ILMN_221383	GPR18	NM_182806.1	NM_182806.1		110168	33413405	NM_182806.1	Gpr18	NP_877958.1	ILMN_1213809	002750543	S	1075	GTCCGATCGGGCAGTTTACGGTCACTTAGCAACATGAACAGTGAGATGCT	14	-	122310841-122310890	14qE5	Mus musculus G protein-coupled receptor 18 (Gpr18), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198039	ILMN_198039	LOC224054	XM_155898.3	XM_155898.3			38080788	XM_155898.3	LOC224054		ILMN_1221136	005090707	S	1620	GGGGGCATGTATTATGAGAACTGTGGTCTCTGGTAAGGACGAGTTAGATG										
Mus musculus	MEEBO	ILMN_185732	ILMN_185732	ZFP162	scl000441.1_274				14318587	BC009091	Zfp162		ILMN_1251244	006400072	S	19	AAGTGACTGGACTCGCTTGGGAAACGGGCAGTGGTAGTGGGGCGCCAGCT										
Mus musculus	Riken	ILMN_204783	ILMN_204783	C130036G20RIK	ri|C130036G20|PX00168P20|AK048126|4045					AK048126	C130036G20Rik		ILMN_1251948	005910088	S	3827	GCTGGCTGAGAATACTGCTTGTGTATGGAGGCCAGTGACCATGCTGTCCG										
Mus musculus	RefSeq	ILMN_197634	ILMN_197634	LOC380953	XM_358470.1	XM_358470.1			38077019	XM_358470.1	LOC380953		ILMN_1233325	004490047	S	6	CCCCATTTCAAAGGAGATGAAGATGCTTGCTGCGGGGGTCTTGTTACAAC										
Mus musculus	Riken	ILMN_205792	ILMN_205792	E030020A01RIK	ri|E030020A01|PX00205O21|AK053160|1120					AK053160	E030020A01Rik		ILMN_1247685	004670253	S	413	TGTCTGTGGTTCCAAGTGAGGACCCAGGACCAACACTAGAGACACCTGTG										
Mus musculus	RefSeq	ILMN_254392	ILMN_254392	EG665378	NM_001081746.1	NM_001081746.1		665378	126215546	NM_001081746.1	EG665378	NP_001075215.1	ILMN_2881810	003310240	S	1465	CGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCATAAAAGGG	1	+	85210191-85210240	1qC5	Mus musculus predicted gene, EG665378 (EG665378), mRNA.					
Mus musculus	RefSeq	ILMN_220023	ILMN_220023	RNASEH1	NM_011275.1	NM_011275.1		19819	6755333	NM_011275.1	Rnaseh1	NP_035405.1	ILMN_2716584	005670243	S	842	ATTTGTGGGCAATGAAGAGGCCGACAGACTGGCACGGGAAGGAGCGAAGC	12	+	29343879-29343928	12qA2	Mus musculus ribonuclease H1 (Rnaseh1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA in RNA-DNA hybrids to 5'-phosphomonoesters [goid 4523] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220023	ILMN_220023	RNASEH1	NM_011275.1	NM_011275.1		19819	6755333	NM_011275.1	Rnaseh1	NP_035405.1	ILMN_2716585	006200528	S	844	TTTGTGGGCAATGAAGAGGCCGACAGACTGGCACGGGAAGGAGCGAAGCA	12	+	29343881-29343930	12qA2	Mus musculus ribonuclease H1 (Rnaseh1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA in RNA-DNA hybrids to 5'-phosphomonoesters [goid 4523] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185734	ILMN_185734	FRMD4A	scl21329.11_324				40254209	NM_172475	Frmd4a		ILMN_2429552	006510041	S	13	GAATTCAGTCTTGCCCTCTAAGCAGTCTGTCAACGGCTCTCAGCGTTGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185734	ILMN_185734	FRMD4A	scl21329.11_324				40254209	NM_172475	Frmd4a		ILMN_1215203	005720377	S	6064	TTGGGGGGGTGGTAAGATTAGGTTGCTCCTGAAACTGACTGTAGAGCATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185734	ILMN_185734	FRMD4A	scl21329.11_324				40254209	NM_172475	Frmd4a		ILMN_2429551	000450561	S	8	CAGTAGAATTCAGTCTTGCCCTCTAAGCAGTCTGTCAACGGCTCTCAGCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_261592	ILMN_261592	EDG2	NM_010336.1	NM_010336.1		14745	6754047	NM_010336.1	Edg2	NP_034466.1	ILMN_2998976	003780082	S	3193	GGCGGAGATCCAGTTAGCAGGACAAAGATTTTGCTCGAGGATTCCCCCAA	4	-	58448271-58448320	4qB3	Mus musculus endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2 (Edg2), mRNA.				lpA1; AI326300; vzg-1; Gpcr26; 5031439C20; Kdt2; MGC29102	lpA1; AI326300; vzg-1; Gpcr26; 5031439C20; Kdt2; MGC29102
Mus musculus	RefSeq	ILMN_254523	ILMN_254523	OLFR64	NM_013617.2	NM_013617.2		18366	22165351	NM_013617.2	Olfr64	NP_038645.1	ILMN_2965952	000380189	S	1167	TGGGGTGGTACTGAGGGGCTTTTTGTCTCTTGTGCCCCCAATCCTGCCTC	7	-	103767076-103767125	7qE3	Mus musculus olfactory receptor 64 (Olfr64), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	5'[b]2; 5'beta2; ORL533; MOR1-1; MOR1-2	5'[b]2; 5'beta2; ORL533; MOR1-1; MOR1-2
Mus musculus	MEEBO	ILMN_192024	ILMN_192024	B130017I01RIK	scl22670.21_1				33563302	NM_172525	B130017I01Rik		ILMN_1245417	006580279	S	1	GGGGTCAGCTCTTAGGGTCATGCATCCCTTAACTATTGCATGGAGTGTTT										
Mus musculus	Riken	ILMN_203864	ILMN_203864	A630014I05RIK	ri|A630014I05|PX00144K06|AK041486|2848					AK041486	A630014I05Rik		ILMN_1220648	004570132	S	2721	GGGTTAGTACCTTCTGACTTCTATCCCCAGCCTCCCACAAGAGGGGTGAG										
Mus musculus	MEEBO	ILMN_193856	ILMN_193856	ZFP91	scl00109910.1_117				51771452	XM_484778	Zfp91		ILMN_1246490	007100672	S	12	CCAGGGTTCCTGGAAACGTTTAGTGATGCCTTGAATATGGGCATCAGCAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	Riken	ILMN_202773	ILMN_202773	5031425D22RIK	ri|5031425D22|PX00037H03|AK019878|2636					AK019878	5031425D22Rik		ILMN_2552181	003850020	S	2499	GGTGTGCTAGCTCTCAGCATCAGCTGTGTGGACTCCTCCAGATTGTCAGT										
Mus musculus	RefSeq	ILMN_185209	ILMN_185209	VBP1	NM_011692.2	NM_011692.2		22327	124248571	NM_011692.2	Vbp1	NP_035822.2	ILMN_1243095	000060647	S	1437	CTCTGGAAAGCCATTGGTACTGACTGTGGTAAAAGTACTTGGTGATACAG	X	+	72780121-72780170	XqA7.3	Mus musculus von Hippel-Lindau binding protein 1 (Vbp1), mRNA.	A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215551	ILMN_224379	5330439J01RIK	XM_001000541.1	XM_001000541.1		109205	94389218	XM_001000541.1	5330439J01Rik	XP_001000541.1	ILMN_2772728	001710753	S	2192	ATCTGCGGATGCTGCCCAAGACCGGCTGCGTGATCCAGCCTGTGCCAAAA				10qB2	PREDICTED: Mus musculus RIKEN cDNA 5330439J01 gene (5330439J01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211556	ILMN_211556	VWA5A	NM_172767.2	NM_172767.2		67776	40254243	NM_172767.2	Vwa5a	NP_766355.2	ILMN_2850792	007050717	S	3604	CCTTCGTAAGTGCAAATTGCTGCCTGAGAGTAAGAGGAGCTGGCTGAGAA	9	+	38550399-38550448	9qA5.1	Mus musculus von Willebrand factor A domain containing 5A (Vwa5a), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		E130119J22; AW552491; 5830475I06Rik; BCSC-1	E130119J22; AW552491; 5830475I06Rik; BCSC-1
Mus musculus	RefSeq	ILMN_207461	ILMN_207461	PIRA6	NM_008848.1	NM_008848.1		18729	6679332	NM_008848.1	Pira6	NP_032874.1	ILMN_1260548	004560048	I	1856	GAACCATTGAATCCTCCAGCTGGCCTCCCAAAAGGCCCAACCCACCAATT					Mus musculus paired-Ig-like receptor A6 (Pira6), transcript variant 1, mRNA.				Pira10; 12M1; p91B	Pira10; 12M1; p91B
Mus musculus	RefSeq	ILMN_207461	ILMN_207461	PIRA6	NM_008848.1	NM_008848.1		18729	6679332	NM_008848.1	Pira6	NP_032874.1	ILMN_2643614	002350253	S	1877	GGCCTCCCAAAAGGCCCAACCCACCAATTCCCACAGAGAACCAGGATCAC					Mus musculus paired-Ig-like receptor A6 (Pira6), transcript variant 1, mRNA.				Pira10; 12M1; p91B	Pira10; 12M1; p91B
Mus musculus	RefSeq	ILMN_191966	ILMN_191966	V1RC32	NM_134187.3	NM_134187.3		171205	112821673	NM_134187.3	V1rc32	NP_598948.1	ILMN_2483806	005810053	S	966	TTAAAAGACGTTTTCTTTTATTTAAAATTACTCGTTCATTACCAGTGTGT	6	+	56986868-56986871:56986872-56986917	6qB3	Mus musculus vomeronasal 1 receptor, C32 (V1rc32), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_216028	ILMN_216028	RUVBL1	NM_019685.1	NM_019685.1		56505	9790082	NM_019685.1	Ruvbl1	NP_062659.1	ILMN_2666483	000610609	S	1347	ACTCTGAGGTATTCGGTGCAGCTGCTGACCCCAGCCAACCTGCTGGCAAA	6	+	88462942-88462991	6qD1	Mus musculus RuvB-like protein 1 (Ruvbl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Tip49a; 2510009G06Rik; Pontin52	Tip49a; 2510009G06Rik; Pontin52
Mus musculus	RefSeq	ILMN_222532	ILMN_222532	RETNLA	NM_020509.3	NM_020509.3		57262	103472021	NM_020509.3	Retnla	NP_065255.2	ILMN_1226472	001110709	S	251	CGAAGACTCTCTCTTGCACTAGTGTCAAGACTATGAACAGATGGGCCTCC	16	+	48843687-48843736	16qB5	Mus musculus resistin like alpha (Retnla), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Xcp2; RELM-alpha; Fizz1; 1810019L16Rik; RELMa; RELMalpha; HIMF	Xcp2; RELM-alpha; Fizz1; 1810019L16Rik; RELMa; RELMalpha; HIMF
Mus musculus	RefSeq	ILMN_190766	ILMN_190766	UQCRFS1	NM_025710.1	NM_025710.1		66694	13385167	NM_025710.1	Uqcrfs1	NP_079986.1	ILMN_1252102	003310273	S	20	ACAGAAACCTGCTAAGTTCCTTTCCTACTGTTGCTATCTTGGTTGTGCTG	13	-	30637120-30637169	13qA3.2	Mus musculus ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 (Uqcrfs1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	4430402G14Rik; AI875505	4430402G14Rik; AI875505
Mus musculus	RefSeq	ILMN_190766	ILMN_190766	UQCRFS1	NM_025710.1	NM_025710.1		66694	13385167	NM_025710.1	Uqcrfs1	NP_079986.1	ILMN_2473090	007200315	S	1211	GAACTTGAGAAAAGGTGGGGACATTATTTTTCATCTCAAAGTGGATGGGA	13	-	30632237-30632286	13qA3.2	Mus musculus ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 (Uqcrfs1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	4430402G14Rik; AI875505	4430402G14Rik; AI875505
Mus musculus	RefSeq	ILMN_216547	ILMN_259721	OLFR768	NM_146864.1	NM_146864.1		258863	22129144	NM_146864.1	Olfr768	NP_667075.1	ILMN_2672332	007210300	S	583	CGGTTTGTGTTGATCTTGGCTGTGCTGACACTCATGTTCACGTTACTGTG	10	-	128530396-128530445	10qD3	Mus musculus olfactory receptor 768 (Olfr768), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR114-4	MOR114-4
Mus musculus	MEEBO	ILMN_192250	ILMN_192250	IGHV1S45_M19403_IG_HEAVY_VARIABLE_1S45_11	IGHV1S45_M19403_Ig_heavy_variable_1S45_11						IGHV1S45_M19403_Ig_heavy_variable_1S45_11		ILMN_2486354	004780672	S	20	ACCATGGGATGGAGCTTCACTGACATCCACTCTGTCTTTCTCTTCACAGG										
Mus musculus	RefSeq	ILMN_200021	ILMN_200021	LOC383111	XM_356882.1	XM_356882.1			38079873	XM_356882.1	LOC383111		ILMN_2537317	001300132	S	241	ATCAAGCCTAAGGTGCCAAAGGGAAGAAGCCACAAACTCAGCTATCTGGC										
Mus musculus	RefSeq	ILMN_223582	ILMN_223582	OLFR683	NM_147045.1	NM_147045.1		259047	22128860	NM_147045.1	Olfr683	NP_667256.1	ILMN_1219362	001690324	S	645	GGGTTCTGACCTCATCCTCATTGTTCTATCTTATTCATTCATTCTGAAGG	7	-	112292129-112292178	7qE3	Mus musculus olfactory receptor 683 (Olfr683), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR40-1	MOR40-1
Mus musculus	RefSeq	ILMN_213834	ILMN_241463	FAM149B	NM_001024512.1	NM_001024512.1		105428	67972426	NM_001024512.1	Fam149b	NP_001019683.1	ILMN_2641270	004810341	S	891	AGGGTACCCTCCCATTGCGCCATTTCACTGCATGAAAGAGGATGTTCTTG	14	+	21182539-21182588	14qA3	Mus musculus family with sequence similarity 149, member B (Fam149b), transcript variant 1, mRNA.				mKIAA0974; MGC32264	mKIAA0974; MGC32264
Mus musculus	RefSeq	ILMN_256880	ILMN_256880	4930594M22RIK	NM_001039531.1	NM_001039531.1		654799	87299608	NM_001039531.1	4930594M22Rik	NP_001034620.1	ILMN_2948344	006960414	S	3035	GGCGTGGTCTCTCAATCAACCCCAGAACTCACTAAAATGGCTACTCCCAC	14	+	122064062-122064111	14qE5	Mus musculus RIKEN cDNA 4930594M22 gene (4930594M22Rik), mRNA.				F930011C10Rik	F930011C10Rik
Mus musculus	RefSeq	ILMN_196848	ILMN_196848	LOC223326	XM_155248.1	XM_155248.1			20908474	XM_155248.1	LOC223326		ILMN_2526010	002680008	S	256	CTGGTGGGAACCAGGAGATTTGCTACTAAAGCAGCCCAGAGAGGAGGCCA										
Mus musculus	RefSeq	ILMN_184593	ILMN_235523	TMEM167	NM_025335.2	NM_025335.2		66074	142364341	NM_025335.2	Tmem167	NP_079611.1	ILMN_2665198	004760364	S	2991	GTCCCTTAGTTTGTGAGGTATGGTGTGGCCATAAAGGTCAACGGATGTTA	13	+	90246775-90246824	13qC3	Mus musculus transmembrane protein 167 (Tmem167), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			0610041E09Rik; AW537806; 5730424F14Rik; AU041184	0610041E09Rik; AW537806; 5730424F14Rik; AU041184
Mus musculus	MEEBO	ILMN_186752	ILMN_186752	5830448L21RIK	scl29499.1.30_233						5830448L21Rik		ILMN_1254606	000940446	S	19	CTCTCTGAACACAGCCAGAAATAGAACCTGAAGAAGAAATCCTCTGTGAG										
Mus musculus	RefSeq	ILMN_244826	ILMN_244826	ARID1A	NM_001080819.1	NM_001080819.1		93760	124249108	NM_001080819.1	Arid1a	NP_001074288.1	ILMN_3128260	000360379	A	2642	GGTCAGGGATGTGTCCTCCACCAGGGGGAATGAACAGGAAAACTCAAGAG	4	-	133249716-133249765	4qD3	Mus musculus AT rich interactive domain 1A (SWI-like) (Arid1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence IDA]	Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence IPI]		1110030E03Rik; Osa1; Smarcf1	1110030E03Rik; Osa1; Smarcf1
Mus musculus	RefSeq	ILMN_215316	ILMN_215316	LCE1E	NM_026811.2	NM_026811.2		68694	124358924	NM_026811.2	Lce1e	NP_081087.1	ILMN_2658001	002060129	S	125	CCCAAATGCCCTCCCAAATGCCAGATCCCAAAGTGCCCTCCAAAATGCCC	3	-	92511859-92511908	3qF1	Mus musculus late cornified envelope 1E (Lce1e), mRNA.				AI507275; 1110031B11Rik	AI507275; 1110031B11Rik
Mus musculus	MEEBO	ILMN_189753	ILMN_189753	TNRC6	scl0233833.6_92				51761954	XM_486002	Tnrc6		ILMN_2464064	001570452	S	18	AACTACAAAAATGTGAACATGTGGAATAAAAACATCCCGGAAGCCAGCGG										
Mus musculus	MEEBO	ILMN_215505	ILMN_215505	D4BWG1540E	scl24852.14.1_95	NM_026257.1			13385765	NM_026257.1	D4Bwg1540e		ILMN_2660409	002650397	S	1462	CAATGCAACGCTGCTGTTGCGGACCCGCAGAGCCCTGCTGTCGAACCCCA										
Mus musculus	RefSeq	ILMN_186455	ILMN_186455	V1RC6	NM_053236.1	NM_053236.1		113863	16716554	NM_053236.1	V1rc6	NP_444466.1	ILMN_2435692	005340608	S	607	CACAGGCATCAAAGACAATACAAACATCTTCATAGCATCAAAAGCCTGAG	6	+	57208749-57208798	6qB3	Mus musculus vomeronasal 1 receptor, C6 (V1rc6), mRNA.		The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]		
Mus musculus	RefSeq	ILMN_208935	ILMN_208935	AGTRAP	NM_009642.4	NM_009642.4		11610	116268116	NM_009642.4	Agtrap	NP_033772.2	ILMN_2590950	005260433	S	3958	GTGTGACTCAGGGACTAGTGAAGGTTGAGAATAGTGGAACCTCGATGGTA	4	-	147451191-147451240	4qE2	Mus musculus angiotensin II, type I receptor-associated protein (Agtrap), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4945] [evidence IMP]	Atrap; AT1R; D4Wsu124e; 3300002E14Rik	Atrap; AT1R; D4Wsu124e; 3300002E14Rik
Mus musculus	MEEBO	ILMN_223822	ILMN_223822	OLFR1140	scl0258635.1_115				33239173	NM_146642	Olfr1140		ILMN_2769908	005670438	S	671	CAGTCTTGAAGATCAGCTGTGATGAGGGCAGATTCAAAGCTTTCTCCACT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	MEEBO	ILMN_194839	ILMN_194839	ADHFE1	scl18175.16.1_293				31340695	NM_175236	Adhfe1		ILMN_2675064	004490242	S	503	GCCCCCATTGGGAAGGGGAAGCCAGTAACTGTGCCTCTTAAACCTCTGAT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxybutanoate + 2-oxoglutarate = acetoacetate + (R)-2-hydroxyglutarate [goid 47988] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194839	ILMN_194839	ADHFE1	scl18175.16.1_293				31340695	NM_175236	Adhfe1		ILMN_1222765	004390132	S	1	GATGGAGAGATGACTATATTGCCTGGCAGATCAATCTGCATAGGGCAGAC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxybutanoate + 2-oxoglutarate = acetoacetate + (R)-2-hydroxyglutarate [goid 47988] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189914	ILMN_311994	2310002J21RIK	XM_001480596.1	XM_001480596.1		66360	149270574	XM_001480596.1	2310002J21Rik	XP_001480646.1	ILMN_2465544	005900689	S	522	ACTGTTATGAATGTAAGACATTAAATGCATCTTTTATGGATGAAGGATTT	19	-	54005541-54005590	19qD2	PREDICTED: Mus musculus RIKEN cDNA 2310002J21 gene (2310002J21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_192167	ILMN_217270	B430201A12RIK	XM_283903.6	XM_283903.6		329739	149251362	XM_283903.6	B430201A12Rik	XP_283903.6	ILMN_1247740	005080528	S	5352	GGACTATCGTCCTCTGTGTTAGTTCAATCCTTTAGATGTTAGTACAGTGT	3	-	108774223-108774272	3qF3	PREDICTED: Mus musculus RIKEN cDNA B430201A12 gene (B430201A12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217270	ILMN_217270	B430201A12RIK	XM_283903.6	XM_283903.6		329739	149251362	XM_283903.6	B430201A12Rik	XP_283903.6	ILMN_1253691	002320390	S	2622	CCCGAGTCCTCACCTTCACAATCAAGCCCTAAAACACAATAGGTCAGAAC	3	-	108776953-108777002	3qF3	PREDICTED: Mus musculus RIKEN cDNA B430201A12 gene (B430201A12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199507	ILMN_236172	LOC670389	XM_981051.1	XM_981051.1		670389	94365941	XM_981051.1	LOC670389	XP_986145.1	ILMN_1239508	001500326	S	465	GCATCAGCAACGTGTTCGAGGACTTCTACTATGTGTCGCCGCTGCACATA					PREDICTED: Mus musculus similar to Feline leukemia virus subgroup C receptor-related protein 1 (Feline leukemia virus subgroup C receptor) (hFLVCR) (LOC670389), mRNA.					
Mus musculus	MEEBO	ILMN_219355	ILMN_219355	1700029K01RIK	scl40779.40.1_7	NM_029606.1			21729783	NM_029606.1	1700029K01Rik		ILMN_2707627	000290246	S	797	GAAGATCTGGATATTGTAATCTGTGAGATCAATGGGTTTTTTAAATGCTT										
Mus musculus	RefSeq	ILMN_211122	ILMN_211122	COQ5	NM_026504.2	NM_026504.2		52064	142378282	NM_026504.2	Coq5	NP_080780.1	ILMN_2612738	003780408	S	483	GAAGAGGATTCCTTGGGAGGTTCACTTGCCACGGTCTGTGACATCAACAG	5	+	115734519-115734568	5qF	Mus musculus coenzyme Q5 homolog, methyltransferase (yeast) (Coq5), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	1810014G04Rik; D5Ertd33e	1810014G04Rik; D5Ertd33e
Mus musculus	RefSeq	ILMN_211122	ILMN_211122	COQ5	NM_026504.2	NM_026504.2		52064	142378282	NM_026504.2	Coq5	NP_080780.1	ILMN_1257300	002850730	S	1873	GCCAGAGCCTGATCTCATTGCCCTCCATTGTGATGTTAAGGGATTTTCTG	5	+	115746853-115746902	5qF	Mus musculus coenzyme Q5 homolog, methyltransferase (yeast) (Coq5), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	1810014G04Rik; D5Ertd33e	1810014G04Rik; D5Ertd33e
Mus musculus	RefSeq	ILMN_217179	ILMN_217179	OLFR658	NM_147049.3	NM_147049.3		259051	141801805	NM_147049.3	Olfr658	NP_667260.1	ILMN_2679919	000460487	S	1036	GGTTGCTCTCTTGATTGGGGGCTTTGACATCCTGTGCATCACAATCTCCT	7	-	111793220-111793269	7qE3	Mus musculus olfactory receptor 658 (Olfr658), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123854; MOR34-5	MGC123854; MOR34-5
Mus musculus	RefSeq	ILMN_229945	ILMN_229945	CTSQ	NM_029636.2	NM_029636.2		104002	27532971	NM_029636.2	Ctsq	NP_083912.2	ILMN_2981137	000270292	S	1038	GCAATTGCTTCATTGGCCCAATACCCTACTGTGTGAGCACCCTGATGTTC	13	-	61044903-61044917:61044918-61044952	13qB2	Mus musculus cathepsin Q (Ctsq), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]			1600010J02Rik	1600010J02Rik
Mus musculus	Riken	ILMN_204759	ILMN_204759	B930049H16RIK	ri|B930049H16|PX00164J09|AK047323|1715					AK047323	B930049H16Rik		ILMN_2567400	007100706	S	1184	CACCCAGTGCTGAGTTAAGGTCTGGCCAAGGGAGCAACCCAACAGCTCAA										
Mus musculus	RefSeq	ILMN_212013	ILMN_212013	POLM	NM_017401.1	NM_017401.1		54125	8394000	NM_017401.1	Polm	NP_059097.1	ILMN_2621762	003440301	S	1987	AGACTTCATAAGCAGCTCATCTCCAGAATCGGCCCCACATGTGTCCTCTC	11	-	5728495-5728544	11qA1	Mus musculus polymerase (DNA directed), mu (Polm), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 3912] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI462166; Tdt-N; B230309I03Rik	AI462166; Tdt-N; B230309I03Rik
Mus musculus	RefSeq	ILMN_212013	ILMN_212013	POLM	NM_017401.1	NM_017401.1		54125	8394000	NM_017401.1	Polm	NP_059097.1	ILMN_2621761	002630438	S	1997	AAGCAGCTCATCTCCAGAATCGGCCCCACATGTGTCCTCTCTCTGTAGCT	11	-	5728485-5728534	11qA1	Mus musculus polymerase (DNA directed), mu (Polm), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 3912] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI462166; Tdt-N; B230309I03Rik	AI462166; Tdt-N; B230309I03Rik
Mus musculus	RefSeq	ILMN_215670	ILMN_215670	2010007H12RIK	NM_027242.3	NM_027242.3		69871	146141129	NM_027242.3	2010007H12Rik	NP_081518.1	ILMN_1227103	007650577	S	576	TCTACCGAGACCTGGTGAGTCTGCAGGTGCCCGAGGAGCAGGTACTGAAC				5qG2	Mus musculus RIKEN cDNA 2010007H12 gene (2010007H12Rik), mRNA.				2010011D20Rik; AL024004	2010011D20Rik; AL024004
Mus musculus	RefSeq	ILMN_215670	ILMN_215670	2010007H12RIK	NM_027242.3	NM_027242.3		69871	146141129	NM_027242.3	2010007H12Rik	NP_081518.1	ILMN_2662283	006040324	S	819	CCTTTCTCATGCATCGGATGCTGAGGCGCTGGGAAGCGTAGCCCTCATAA				5qG2	Mus musculus RIKEN cDNA 2010007H12 gene (2010007H12Rik), mRNA.				2010011D20Rik; AL024004	2010011D20Rik; AL024004
Mus musculus	Riken	ILMN_203289	ILMN_203289	PIGA	ri|4432411L20|PX00011A21|AK014488|3321					AK014488	Piga		ILMN_1260307	004220367	S	2224	GGGTATGTGGCAGTAGCGGTGCATGTCAGAACCTGTGTCTCCAAGTGTTG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	Riken	ILMN_203067	ILMN_203067	TTK	ri|C330012K12|PX00076C16|AK049200|1841					AK049200	Ttk		ILMN_1217234	007000523	S	944	CAGCTGTGACACAGTTAACAACAAGAAAGGGGTCAGGACCAGACCGAGAC							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186531	ILMN_238646	4932413F04RIK	XM_001004814.2	XM_001004814.2		319215	149260309	XM_001004814.2	4932413F04Rik	XP_001004814.1	ILMN_2436311	003420706	S	2508	CTCTACGCATCAGTTACATAAGACCTGAAGGTATGAGAGGCACACTCACC	9	+	103467964-103467991:103467992-103468013	9qF1	PREDICTED: Mus musculus RIKEN cDNA 4932413F04 gene (4932413F04Rik), mRNA.					
Mus musculus	Riken	ILMN_207168	ILMN_207168	ENPP3	ri|F830001C18|PL00004E13|AK089553|1749					AK089553	ENPP3		ILMN_1229710	005670646	S	1565	AAGGAGGCTGGAAGAGGGCGGGCGCAGAGTCCTATAGAGCTGGTGACATT										
Mus musculus	RefSeq	ILMN_212458	ILMN_249193	5930434B04RIK	NM_029862.3	NM_029862.3		381356	148540024	NM_029862.3	5930434B04Rik	NP_084138.1	ILMN_1213573	001570072	S	1363	AGGTGGAGGCCCTCAGATATAGGCCAATTTGGGGTGGTCAGTCACTTAAG				2qA3	Mus musculus RIKEN cDNA 5930434B04 gene (5930434B04Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-449M10.1	RP23-449M10.1
Mus musculus	RefSeq	ILMN_212458	ILMN_249193	5930434B04RIK	NM_029862.3	NM_029862.3		381356	148540024	NM_029862.3	5930434B04Rik	NP_084138.1	ILMN_2626683	006550280	S	274	TGCAAACACAGTAGCTGAGAAGGTTGACCGGCTGCGCTCCTGGCAGAAGG				2qA3	Mus musculus RIKEN cDNA 5930434B04 gene (5930434B04Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-449M10.1	RP23-449M10.1
Mus musculus	RefSeq	ILMN_221191	ILMN_221191	CYBA	NM_007806.1	NM_007806.1		13057	22094076	NM_007806.1	Cyba	NP_031832.1	ILMN_2806700	000830369	S	432	CAGCCATCCGAGGTGAGCAGTGGACTCCCATTGAGCCTAAACCCAAGGAG	8	-	125311125-125311174	8qE1	Mus musculus cytochrome b-245, alpha polypeptide (Cyba), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	b558	b558
Mus musculus	RefSeq	ILMN_187223	ILMN_249588	TREX1	NM_001012236.1	NM_001012236.1		22040	59624980	NM_001012236.1	Trex1	NP_001012236.1	ILMN_2509737	006350189	S	761	CCCATGTACGGCACTCCGGCTACCACTGGAACAACCAACCTAAGGCCACA	9	-	108960695-108960744	9qF2	Mus musculus three prime repair exonuclease 1 (Trex1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Interacting selectively with the mismatch repair complex MutLalpha [goid 32405] [evidence ISA]; Interacting selectively with the mismatch repair complex MutSalpha [goid 32407] [evidence ISA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]; Interacting selectively with an adenyl deoxyribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety [goid 32558] [evidence IDA]	1661; AU041952	1661; AU041952
Mus musculus	Riken	ILMN_205957	ILMN_205957	C230038F01RIK	ri|C230038F01|PX00174D09|AK048749|2927					AK048749	C230038F01Rik		ILMN_1221975	005860193	S	2643	GGACAGCACACATTGGTGAAGGGAAGCAAGGAAGGCCGAGAATGGACGCG										
Mus musculus	Riken	ILMN_202919	ILMN_202919	AGL	ri|4732469M24|PX00051N13|AK028914|2733					AK028914	Agl		ILMN_1247096	004480202	S	2415	AGAGCACTTAGGCAGAGCGCTTCATTCCCGTGTGATACTGCATACCGTTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Intracellular foci at which aggregated proteins have been sequestered [goid 16234] [evidence IDA]	The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IDA]	Catalysis of the cleavage of branch points in branched glycogen polymers [goid 4133] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any polysaccharide [goid 30247] [evidence IDA]; Interacting selectively with any polysaccharide [goid 30247] [evidence IMP]; Interacting selectively and non-covalently with a polymer of ubiqutin [goid 31593] [evidence IDA]; Interacting selectively and non-covalently with a polymer of ubiqutin [goid 31593] [evidence IMP]		
Mus musculus	MEEBO	ILMN_194464	ILMN_194464	5031439A09RIK	scl22418.15.1_82				31560142	NM_026582	5031439A09Rik		ILMN_2704184	006620674	S	3239	ACATGGCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCATGG										
Mus musculus	MEEBO	ILMN_194464	ILMN_194464	5031439A09RIK	scl22418.15.1_82				31560142	NM_026582	5031439A09Rik		ILMN_2704186	000520100	S	3237	CTACATGGCAAACCCCATCCTGTGTTTTTCCTAACTTTGGCCAGAACCAT										
Mus musculus	RefSeq	ILMN_217857	ILMN_239655	OLFR829	NM_147067.1	NM_147067.1		259070	22128822	NM_147067.1	Olfr829	NP_667278.1	ILMN_2688469	004860603	S	589	GCCTGTTCCAACACTCTTATTGACAACATACTAATATACATTTCATCTTG	9	+	18661659-18661708	9qA2	Mus musculus olfactory receptor 829 (Olfr829), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR147-1	MOR147-1
Mus musculus	RefSeq	ILMN_189719	ILMN_261778	VANGL2	NM_033509.3	NM_033509.3		93840	118131201	NM_033509.3	Vangl2	NP_277044.1	ILMN_2591811	005310195	S	1304	CATGACTTCCCTGTCTACAACCCCGCCCTCCTCAACCTGCCCAAGTCCGT	1	-	173938684-173938733	1qH3	Mus musculus vang-like 2 (van gogh, Drosophila) (Vangl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates [goid 1736] [evidence IMP]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IGI]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell [goid 45197] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Vang1l2; Lp; Ltap; stbm; Lpp1; C530001F03Rik; strabismus	Vang1l2; Lp; Ltap; stbm; Lpp1; C530001F03Rik; strabismus
Mus musculus	RefSeq	ILMN_189719	ILMN_261778	VANGL2	NM_033509.3	NM_033509.3		93840	118131201	NM_033509.3	Vangl2	NP_277044.1	ILMN_2685770	004060593	S	2192	TGTACCCAGTCTCCCCTCTTCCTCAGTTTTTCCCATCTGGAAATCTGGAG	1	-	173934520-173934569	1qH3	Mus musculus vang-like 2 (van gogh, Drosophila) (Vangl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates [goid 1736] [evidence IMP]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IGI]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell [goid 45197] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Vang1l2; Lp; Ltap; stbm; Lpp1; C530001F03Rik; strabismus	Vang1l2; Lp; Ltap; stbm; Lpp1; C530001F03Rik; strabismus
Mus musculus	RefSeq	ILMN_201615	ILMN_219431	PSMD3	NM_009439.1	NM_009439.1		22123	19705423	NM_009439.1	Psmd3	NP_033465.1	ILMN_2543231	007040474	S	787	GCAGCTACGAGGTCCAGGGCTCGGCGGTTCTGAGTGCTGATCTTCTGCAT	11	+	98549065-98549114	11qD	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 (Psmd3), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Modulates the activity of an enzyme [goid 30234] [evidence IEA]	Psd3; Tstap91a; AntP91a; AI255837; D11Bwg1349e	Psd3; Tstap91a; AntP91a; AI255837; D11Bwg1349e
Mus musculus	RefSeq	ILMN_186729	ILMN_328655	LOC100046982	XM_001477182.1	XM_001477182.1		100046982	149267805	XM_001477182.1	LOC100046982	XP_001477232.1	ILMN_2438008	004570092	S	1293	CCCCGGAATCTTGAGCTCTGTAAGAAAACCAAAGATGAGTCTGTTCTTGG					PREDICTED: Mus musculus hypothetical protein LOC100046982 (LOC100046982), mRNA.					
Mus musculus	Riken	ILMN_205283	ILMN_205283	4833405F18RIK	ri|4833405F18|PX00313D15|AK029361|2409					AK029361	4833405F18Rik		ILMN_2571390	000160730	S	2141	CTGGCGACTCTTTATCCGGTTTGGAAAGCCCAGAGTGTCCTCAGCGTGGA										
Mus musculus	RefSeq	ILMN_218470	ILMN_238311	JAK3	NM_010589.5	NM_010589.5		16453	146134413	NM_010589.5	Jak3	NP_034719.2	ILMN_1219155	004850086	S	3017	TTCTCCCGCCAATCTGACGTGTGGAGCTTCGGAGTGGTGTTGTACGAGCT				8qB3.3	Mus musculus Janus kinase 3 (Jak3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA];  [goid 4718] [evidence IDA]	wil; fae	wil; fae
Mus musculus	RefSeq	ILMN_200989	ILMN_200989	LOC386485	XM_359327.1	XM_359327.1			38087667	XM_359327.1	LOC386485		ILMN_2540712	001470736	S	8	AGCTGTGTTGCCGCAGCGTGGGGGCTCCAGGATGCGGGACCTCTTTTGTC										
Mus musculus	RefSeq	ILMN_221399	ILMN_221399	SFRS9	NM_025573.3	NM_025573.3		108014	118130304	NM_025573.3	Sfrs9	NP_079849.1	ILMN_1222447	006770309	S	817	GGGTCTCTTCAGTTTTTTAGATGAGCTGGGCTACTTTGTGCTCAGAGTCT	5	+	115782744-115782793	5qF	Mus musculus splicing factor, arginine/serine rich 9 (Sfrs9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	SRp30c; 2610029M16Rik; 25kDa	SRp30c; 2610029M16Rik; 25kDa
Mus musculus	RefSeq	ILMN_222671	ILMN_222671	PHLDB2	NM_153412.2	NM_153412.2		208177	141802479	NM_153412.2	Phldb2	NP_700461.1	ILMN_1223566	004280576	S	5438	AGATATGTATGTGGGTTAAATGTATGAAGTTTGGATTAAAGCGTTGACCT				16qB5	Mus musculus pleckstrin homology-like domain, family B, member 2 (Phldb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AV253284; LL5b; LL5beta; C820004H04Rik	AV253284; LL5b; LL5beta; C820004H04Rik
Mus musculus	RefSeq	ILMN_209448	ILMN_227116	ANKRD37	NM_001039562.1	NM_001039562.1		654824	88319965	NM_001039562.1	Ankrd37	NP_001034651.1	ILMN_2595857	001740497	S	749	CAAGCCATTGCTTTGGCTCATCACATGATGAAACTCCTGAGGAGGAAAAC	8	-	47082367-47082416	8qB1.1	Mus musculus ankyrin repeat domain 37 (Ankrd37), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200414	ILMN_313274	LOC100047135	XM_001478025.1	XM_001478025.1		100047135	149253749	XM_001478025.1	LOC100047135	XP_001478075.1	ILMN_1245262	000830546	S	655	GGTCAGACTAGCTCCAAAGACAGCTAGGCAGAAACTCTGGCCTGGGAGTA					PREDICTED: Mus musculus hypothetical protein LOC100047135 (LOC100047135), mRNA.					
Mus musculus	MEEBO	ILMN_189829	ILMN_189829	B230205O20RIK	scl077413.2_19						B230205O20Rik		ILMN_2464736	007610020	S	13	AGTTTGGGGGAGCACAGGTTAGAGCAGTTGTCCACTGTAGTTGAACCCCT										
Mus musculus	RefSeq	ILMN_200855	ILMN_200855	LOC381880	XM_358669.1	XM_358669.1			38086584	XM_358669.1	LOC381880		ILMN_2540241	006480255	S	252	TTTGGATTCTAACACTGAGGGCCCGGGGGCGGAAGTCGCAGGGAGGGACA										
Mus musculus	RefSeq	ILMN_229835	ILMN_229835	EDAR	NM_010100.1	NM_010100.1		13608	6753713	NM_010100.1	Edar	NP_034230.1	ILMN_2861879	007510088	S	179	CCTGCTCGCCTTCTCCGTAGACCCATCTTCTGCTGGGAAAAGCTAACCTC	10	-	58070825-58070874	10qB4	Mus musculus ectodysplasin-A receptor (Edar), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transfer of NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters, from the cytoplasm into the nucleus, across the nuclear membrane [goid 42346] [evidence IDA]; The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity [goid 7431] [evidence IDA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ED1R; ED3; EDA3; ED5; EDA-A1R; dl	ED1R; ED3; EDA3; ED5; EDA-A1R; dl
Mus musculus	RefSeq	ILMN_243385	ILMN_243385	ZFP512	NM_172993.1	NM_172993.1		269639	27370499	NM_172993.1	Zfp512	NP_766581.1	ILMN_2814051	003850039	S	3112	CGTGCTCATGCCCTCAGTGCCCTGTAAGTAGATGAGGGTGAGGGTTGTGG	5	+	31758203-31758252	5qB1	Mus musculus zinc finger protein 512 (Zfp512), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI450173; 2500002M11Rik; D230008H22	AI450173; 2500002M11Rik; D230008H22
Mus musculus	RefSeq	ILMN_202776	ILMN_311681	9630041A04RIK	XR_035282.1	XR_035282.1		442798	149260302	XR_035282.1	9630041A04Rik		ILMN_2552202	003610682	S	707	GGAGAAGGAGAAGGACTCTGAGCATTTGGTTGGCTGCTGGGACAGGTGAG	9	+	101845282-101845331	9qF1	PREDICTED: Mus musculus RIKEN cDNA 9630041A04 gene (9630041A04Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_201421	ILMN_201421	LOC382157	XM_356256.1	XM_356256.1			38093603	XM_356256.1	LOC382157		ILMN_2542231	003120672	S	286	CCGAGGCGTTATCGAACTTCTTCCAGATCCAGATCGAGGGATCGATTCAA										
Mus musculus	RefSeq	ILMN_187381	ILMN_250917	BCL11B	NM_021399.2	NM_021399.2		58208	120586998	NM_021399.2	Bcl11b	NP_067374.2	ILMN_2611022	006110008	S	2823	GCGGCAGTCCAGCCTAACCTGTGTCTGCGAAGTCCTATGGAAACCTGAGG	12	-	109153447-109153496	12qF1	Mus musculus B-cell leukemia/lymphoma 11B (Bcl11b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process occurring during the post-embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31077] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of an alpha-beta T cell [goid 46632] [evidence IMP]; The process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33153] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Rit1; 9130430L19Rik; Ctip2; B630002E05Rik; AI604821	Rit1; 9130430L19Rik; Ctip2; B630002E05Rik; AI604821
Mus musculus	RefSeq	ILMN_194755	ILMN_250917	BCL11B	NM_021399.2	NM_021399.2		58208	120586998	NM_021399.2	Bcl11b	NP_067374.2	ILMN_1223119	005260162	S	4054	TACTATACATTGGACTTGTTGGGATTTGATGTTTGAATTCTGTTGACCCG	12	-	109152216-109152265	12qF1	Mus musculus B-cell leukemia/lymphoma 11B (Bcl11b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process occurring during the post-embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31077] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of an alpha-beta T cell [goid 46632] [evidence IMP]; The process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33153] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Rit1; 9130430L19Rik; Ctip2; B630002E05Rik; AI604821	Rit1; 9130430L19Rik; Ctip2; B630002E05Rik; AI604821
Mus musculus	RefSeq	ILMN_186516	ILMN_250917	BCL11B	NM_021399.2	NM_021399.2		58208	120586998	NM_021399.2	Bcl11b	NP_067374.2	ILMN_2436183	007650475	S	7360	GCTTTTGTTGTTTGCCTAGAGGGTTTGTCTCTTACAGCAAGTTTGGAGCT	12	-	109148910-109148959	12qF1	Mus musculus B-cell leukemia/lymphoma 11B (Bcl11b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process occurring during the post-embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31077] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of an alpha-beta T cell [goid 46632] [evidence IMP]; The process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33153] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Rit1; 9130430L19Rik; Ctip2; B630002E05Rik; AI604821	Rit1; 9130430L19Rik; Ctip2; B630002E05Rik; AI604821
Mus musculus	RefSeq	ILMN_187381	ILMN_250917	BCL11B	NM_021399.2	NM_021399.2		58208	120586998	NM_021399.2	Bcl11b	NP_067374.2	ILMN_2443624	000070446	S	3699	CCACTGGGTAGACAGCTGTGGCCTGTAGTGGCGGGAAAGAAGAGACTAAC	12	-	109152571-109152620	12qF1	Mus musculus B-cell leukemia/lymphoma 11B (Bcl11b), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process occurring during the post-embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31077] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of an alpha-beta T cell [goid 46632] [evidence IMP]; The process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33153] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Rit1; 9130430L19Rik; Ctip2; B630002E05Rik; AI604821	Rit1; 9130430L19Rik; Ctip2; B630002E05Rik; AI604821
Mus musculus	RefSeq	ILMN_245558	ILMN_245558	CDC14A	NM_001080818.1	NM_001080818.1		229776	124249116	NM_001080818.1	Cdc14a	NP_001074287.1	ILMN_3140107	002470692	A	566	GAACTAATCGGGGCTTGCGAGTTCATGAAAGATCGATTATATTTTGCTAC	3	-	116125556-116125575:116126355-116126384	3qG1	Mus musculus CDC14 cell division cycle 14 homolog A (S. cerevisiae) (Cdc14a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	CDC14a1; Cdc14; A830059A17Rik; CDC14A2	CDC14a1; Cdc14; A830059A17Rik; CDC14A2
Mus musculus	RefSeq	ILMN_220072	ILMN_245558	CDC14A	NM_001080818.1	NM_001080818.1		229776	124249116	NM_001080818.1	Cdc14a	NP_001074287.1	ILMN_2717251	006940180	S	3666	GAGATTCTTAGATATCGATTGTCTTCCAGGCTGCTTGAGAATGGGCAAGG	3	-	115976240-115976289	3qG1	Mus musculus CDC14 cell division cycle 14 homolog A (S. cerevisiae) (Cdc14a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	CDC14a1; Cdc14; A830059A17Rik; CDC14A2	CDC14a1; Cdc14; A830059A17Rik; CDC14A2
Mus musculus	RefSeq	ILMN_199801	ILMN_199801	LOC383026	XM_356806.1	XM_356806.1			38077507	XM_356806.1	LOC383026		ILMN_1233086	000650730	S	14	CTCAGGAGAAGTATCTGTTCTTGTGGTTGGGAGAAGGGGAGTCTGAAGAG										
Mus musculus	Riken	ILMN_202256	ILMN_202256	0610009O04RIK	ri|0610009O04|R000002E21|AK002431|1349					AK002431	0610009O04Rik		ILMN_1222927	003390392	S	1271	GGGAAGTGGGGTGGGGCCATCGATCAGTAGTAGAGCGTTTACCTAGCATG										
Mus musculus	RefSeq	ILMN_211910	ILMN_211910	D18ERTD653E	NM_172631.3	NM_172631.3		52662	142365012	NM_172631.3	D18Ertd653e	NP_766219.2	ILMN_1227309	000620370	S	1834	GACATATTTGATTCCAAAAGGAGACTGCGGATAAATGAGGCCACAGTGGC	18	+	68414544-68414593	18qE2	Mus musculus DNA segment, Chr 18, ERATO Doi 653, expressed (D18Ertd653e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			A430108L08Rik; C18orf1; A430083H02; D330030L18Rik; 8230401C20Rik	A430108L08Rik; C18orf1; A430083H02; D330030L18Rik; 8230401C20Rik
Mus musculus	RefSeq	ILMN_193664	ILMN_207456	PBX1	NM_183355.2	NM_183355.2		18514	134032042	NM_183355.2	Pbx1	NP_899198.1	ILMN_2499305	006280767	S	6534	GGTGGGCTTCATCGGAAAGTCTGTATTGGTCATAGGGGAAAAGAAAGCCA	1	-	170084326-170084375	1qH2.3	Mus musculus pre B-cell leukemia transcription factor 1 (Pbx1), transcript variant a, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	AI848790; D230003C07Rik; Pbx-1; AU015730; 2310056B04Rik	AI848790; D230003C07Rik; Pbx-1; AU015730; 2310056B04Rik
Mus musculus	RefSeq	ILMN_207456	ILMN_207456	PBX1	NM_183355.2	NM_183355.2		18514	134032042	NM_183355.2	Pbx1	NP_899198.1	ILMN_2587711	004150221	I	2708	TGTAGTTCCATCAGGTTGAGTCCTAGGCAGGAAGTCTGGCAGGTAAGGGC	1	-	170088152-170088201	1qH2.3	Mus musculus pre B-cell leukemia transcription factor 1 (Pbx1), transcript variant a, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	AI848790; D230003C07Rik; Pbx-1; AU015730; 2310056B04Rik	AI848790; D230003C07Rik; Pbx-1; AU015730; 2310056B04Rik
Mus musculus	MEEBO	ILMN_190424	ILMN_190424	D930001I22RIK	scl18384.2_543				27734173	NM_173397	D930001I22Rik		ILMN_2470039	002340424	S	6	CAGATTGCAGTCAGAGAATAGTTCGTGCCACTGTTACCTACACACAGTCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]				
Mus musculus	MEEBO	ILMN_190424	ILMN_190424	D930001I22RIK	scl18384.2_543				27734173	NM_173397	D930001I22Rik		ILMN_2715170	006450246	S	1639	ATTACTACTCTATTTGTTCTCTGTTGGCAAAGCTCCAGTGTCACCCACAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200943	ILMN_321249	AU015836	XR_035182.1	XR_035182.1		385493	149272020	XR_035182.1	AU015836		ILMN_2540556	000870452	S	142	ATGCCGAGCTGGTGGTTGACGAGCCCAATGATCCCCATGCAGAGTATGGA				XqC3	PREDICTED: Mus musculus expressed sequence AU015836 (AU015836), misc RNA.					
Mus musculus	RefSeq	ILMN_197750	ILMN_254211	LOC634280	XM_921089.2	XM_921089.2		634280	94399036	XM_921089.2	LOC634280	XP_926182.1	ILMN_2529239	006450079	S	364	GACATCTACGGCGGCGACGCGCAGCTTTGGGAGGCGCATTTCCGCGGCAT					PREDICTED: Mus musculus hypothetical LOC634280 (LOC634280), mRNA.					
Mus musculus	RefSeq	ILMN_221561	ILMN_221561	PDCD1LG2	NM_021396.1	NM_021396.1		58205	10946739	NM_021396.1	Pdcd1lg2	NP_067371.1	ILMN_2979089	002070035	S	1169	GACTCTCTGAACAGCAAGACCCCAATGGCACTTTAGACTTACCCCTGGGA	19	+	29545193-29545242	19qC1	Mus musculus programmed cell death 1 ligand 2 (Pdcd1lg2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC124040; Btdc; PD-L2; B7-DC; MGC124039; F730015O22Rik	MGC124040; Btdc; PD-L2; B7-DC; MGC124039; F730015O22Rik
Mus musculus	RefSeq	ILMN_197155	ILMN_226762	MRS2	NM_001013389.1	NM_001013389.1		380836	61656187	NM_001013389.1	Mrs2	NP_001013407.1	ILMN_1253039	001300240	S	937	CATGTCTTTGAGAAGAGCAGCACTGGGATCGACCACGCAGAGGAGATGGA	13	-	25087324-25087366:25088897-25088903	13qA3.1	Mus musculus MRS2 magnesium homeostasis factor homolog (S. cerevisiae) (Mrs2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	RPT; Gm902; HPT; MRS2	RPT; Gm902; HPT; MRS2
Mus musculus	RefSeq	ILMN_226762	ILMN_226762	MRS2	NM_001013389.1	NM_001013389.1		380836	61656187	NM_001013389.1	Mrs2	NP_001013407.1	ILMN_2868102	005360241	S	1730	AAGAAGAGTGCAGCTTCGTGCTGAAGGAGCCCAGGGACTGGCAGAGCCCA	13	-	25084607-25084656	13qA3.1	Mus musculus MRS2 magnesium homeostasis factor homolog (S. cerevisiae) (Mrs2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	RPT; Gm902; HPT; MRS2	RPT; Gm902; HPT; MRS2
Mus musculus	RefSeq	ILMN_250872	ILMN_250872	1700012H05RIK	NM_029660.1	NM_029660.1		76572	65301142	NM_029660.1	1700012H05Rik	NP_083936.1	ILMN_3152061	005910400	A	1223	GAGCCCGCTGGCCTCAGGACTGGCATCGGAAGTCTAGAAAAAGAAGAATC	7	+	107001844-107001844:107001845-107001893	7qE3	Mus musculus RIKEN cDNA 1700012H05 gene (1700012H05Rik), mRNA.				HNRNPG-T	HNRNPG-T
Mus musculus	RefSeq	ILMN_198097	ILMN_198097	EG224572	XM_139786.7	XM_139786.7		224572	149268538	XM_139786.7	EG224572	XP_139786.7	ILMN_1235601	001440066	S	2123	GATACCTCTGCTTTTTGGCCCTTGGGAGTTACACCATGGCCTTCTTGTCT	17	+	19831384-19831433	17qA3.2	PREDICTED: Mus musculus predicted gene, EG224572 (EG224572), mRNA.					
Mus musculus	RefSeq	ILMN_201407	ILMN_201407	LOC385112	XM_358061.1	XM_358061.1			38093552	XM_358061.1	LOC385112		ILMN_1234984	001410112	S	628	AATTCACTTGGGAACACTCGTGGGGAGCAGAGTGGGGCCTTTGTGCCTAG										
Mus musculus	RefSeq	ILMN_213262	ILMN_213262	AGPAT6	NM_018743.3	NM_018743.3		102247	142350728	NM_018743.3	Agpat6	NP_061213.2	ILMN_1252335	003420020	S	2963	GAGAGCGTGGCAGGACAAGGTCAGAGCTACAGCTGCTGCCCAGGATTTTA	8	-	24284242-24284291	8qA2	Mus musculus 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta) (Agpat6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways involving diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues. DAG is a normal intermediate in the biosynthesis of phosphatidyl phospholipids and is released from them by phospholipase C activity. DAG from phosphatidyl inositol polyphosphates is important in signal transduction [goid 46339] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IMP]; The chemical reactions and pathways resulting in the formation of triacylglycerol, any triester of glycerol [goid 19432] [evidence IMP]; The chemical reactions and pathways involving diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues. DAG is a normal intermediate in the biosynthesis of phosphatidyl phospholipids and is released from them by phospholipase C activity. DAG from phosphatidyl inositol polyphosphates is important in signal transduction [goid 46339] [evidence IMP]; The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland [goid 2071] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IEA]; Catalysis of the reaction: (R)-3-hydroxytetradecanoyl-[acyl-carrier protein] + UDP-N-acetylglucosamine = [acyl-carrier protein] + UDP-3-O-(3-hydroxytetradecanoyl)-N-acetylglucosamine [goid 8780] [evidence NAS]	AW545732; AU041707; Tsarg7	AW545732; AU041707; Tsarg7
Mus musculus	RefSeq	ILMN_188630	ILMN_237485	3200001K10RIK	XM_988683.1	XM_988683.1		381626	94376101	XM_988683.1	3200001K10Rik	XP_993777.1	ILMN_2454325	004900544	S	3673	TCCTGAGAGAGGAAGCTTCCCGACAGGGCTTGTACATTCCCAGATGATGG				5qB1	PREDICTED: Mus musculus RIKEN cDNA 3200001K10 gene, transcript variant 1 (3200001K10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198012	ILMN_198012	LOC231444	XM_124565.3	XM_124565.3			38080298	XM_124565.3	LOC231444		ILMN_1212633	004610376	S	58	GTGCCCCTCAGGACACCCGCAGATATGTGTATCCCTCCACTGTATGCTGA										
Mus musculus	MEEBO	ILMN_221745	ILMN_221745	4932416E17	scl41816.3.1_173				51766306	XM_483992	4932416E17		ILMN_2739788	004150373	S	3154	TATCCTGTGTCATCGCATTCTAAACTGATGATAAACGTCTGGCCTGAGAT										
Mus musculus	RefSeq	ILMN_215074	ILMN_310437	LOC100041722	XR_033330.1	XR_033330.1		100041722	149265488	XR_033330.1	LOC100041722		ILMN_2655222	005130440	S	1572	TTCAGTGTGGATAGTGTGTCCAACTCTGTGGATTCCAACTTCACGATGGA	14	+	42394409-42394458	14qB	PREDICTED: Mus musculus hypothetical protein LOC100041722 (LOC100041722), misc RNA.					
Mus musculus	RefSeq	ILMN_254666	ILMN_254666	ATP6V1C2	NM_133699.1	NM_133699.1		68775	19526869	NM_133699.1	Atp6v1c2	NP_598460.1	ILMN_2898578	006940762	S	1368	GCTCCTACAGCCCCATAAAAAGTCAGCCACCAAACGCCTGAGAGAGGTGC	12	-	17291658-17291664:17291665-17291707	12qA1.1	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit C2 (Atp6v1c2), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	1110038G14Rik	1110038G14Rik
Mus musculus	Riken	ILMN_204267	ILMN_204267	9630002K18RIK	ri|9630002K18|PX00114L13|AK035768|1804					AK035768	9630002K18Rik		ILMN_1243284	002650025	S	1454	CCTCACAGATACCTTGGGAGGCTGCAGATGGGAACCCGTGGCAGCGTGGA										
Mus musculus	RefSeq	ILMN_250937	ILMN_250937	OLFR406	NM_001011863.1	NM_001011863.1		258181	58801481	NM_001011863.1	Olfr406	NP_001011863.1	ILMN_2903020	000670309	S	821	CAGCAGCTGTTGTCATGTATACAGTGGTGACTCCCTTGCTGAACCCCTTC	11	+	74083713-74083762	11qB5	Mus musculus olfactory receptor 406 (Olfr406), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR133-1	MOR133-1
Mus musculus	Riken	ILMN_202726	ILMN_202726	MAL	ri|2200001M24|ZX00079E20|AK019046|488					AK019046	Mal		ILMN_1252139	002060598	S	155	CCTGACTTGCTCTTCGTTTGTGAGTTTGATGCAGCCTACCACTGTGTGGC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]			
Mus musculus	RefSeq	ILMN_210137	ILMN_210137	ZC3HC1	NM_172735.2	NM_172735.2		232679	142374816	NM_172735.2	Zc3hc1	NP_766323.1	ILMN_2612096	005860064	S	193	CGCCTCAAGCAGAACAGTCTCCATTGGAATCCACAAGCAAAGAAGCCTTC	6	-	30337444-30337493	6qA3.3	Mus musculus zinc finger, C3HC type 1 (Zc3hc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110054L24Rik; Nipa; HSPC216; AU019789; AU018540	1110054L24Rik; Nipa; HSPC216; AU019789; AU018540
Mus musculus	RefSeq	ILMN_210137	ILMN_210137	ZC3HC1	NM_172735.2	NM_172735.2		232679	142374816	NM_172735.2	Zc3hc1	NP_766323.1	ILMN_2701570	002710343	S	966	TCCCCTAGGCGGATGATGACCCGAAGCCAGGATGCTACAGTTTCTCCAGG	6	-	30323252-30323301	6qA3.3	Mus musculus zinc finger, C3HC type 1 (Zc3hc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110054L24Rik; Nipa; HSPC216; AU019789; AU018540	1110054L24Rik; Nipa; HSPC216; AU019789; AU018540
Mus musculus	RefSeq	ILMN_210137	ILMN_210137	ZC3HC1	NM_172735.2	NM_172735.2		232679	142374816	NM_172735.2	Zc3hc1	NP_766323.1	ILMN_2602588	002510259	S	1738	TTCCGTCAGGGGACTGCAGGGTTAGAACACCCATTCAGCGGCTTTGGTTC	6	-	30316447-30316496	6qA3.3	Mus musculus zinc finger, C3HC type 1 (Zc3hc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110054L24Rik; Nipa; HSPC216; AU019789; AU018540	1110054L24Rik; Nipa; HSPC216; AU019789; AU018540
Mus musculus	RefSeq	ILMN_219069	ILMN_219069	APOC4	NM_007385.2	NM_007385.2		11425	31982517	NM_007385.2	Apoc4	NP_031411.1	ILMN_3009225	000940451	S	371	TGTGTCCCAGACTGCTCTGCAAAGACCGGACTCAGGGTTAAAGTGCCACG	7	-	20263486-20263495:20263496-20263535	7qA3	Mus musculus apolipoprotein C-IV (Apoc4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]		Acl	Acl
Mus musculus	RefSeq	ILMN_191922	ILMN_325817	LOC100040462	XM_001474715.1	XM_001474715.1		100040462	149245352	XM_001474715.1	LOC100040462	XP_001474765.1	ILMN_2483422	007380324	S	904	TAAAAAAGGATGAAGATTGCCTCCAGACTCCTCCTAAGCCTCCACCAACA	1	-	175801532-175801581	1qH3	PREDICTED: Mus musculus similar to interferon-activatable protein (LOC100040462), mRNA.					
Mus musculus	RefSeq	ILMN_188152	ILMN_325817	LOC100040462	XM_001474715.1	XM_001474715.1		100040462	149245352	XM_001474715.1	LOC100040462	XP_001474765.1	ILMN_1226619	004210270	S	726	GGAACCGATATAAAAACAGAGGAAGATTGTCTCCAGAATTCTCCTAAGCC	1	-	175803016-175803065	1qH3	PREDICTED: Mus musculus similar to interferon-activatable protein (LOC100040462), mRNA.					
Mus musculus	RefSeq	ILMN_187056	ILMN_187056	ZFP330	NM_145600.1	NM_145600.1		30932	21704207	NM_145600.1	Zfp330	NP_663575.1	ILMN_2440789	000870022	S	813	ATGGAGCCTCAGGGTATGATGCTTACTGGAAGAACCTGTCGTCGGACAAG	8	-	85288298-85288347	8qC2	Mus musculus zinc finger protein 330 (Zfp330), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC103365; BC008086; Noa36; MGC6718; MGC41503	MGC103365; BC008086; Noa36; MGC6718; MGC41503
Mus musculus	RefSeq	ILMN_187056	ILMN_187056	ZFP330	NM_145600.1	NM_145600.1		30932	21704207	NM_145600.1	Zfp330	NP_663575.1	ILMN_2825109	005340328	S	1442	CTTCATGCTGGGTAATGTTCACTCTGCATTAGCGGTTGCCATGTTCACCG	8	-	85287669-85287718	8qC2	Mus musculus zinc finger protein 330 (Zfp330), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC103365; BC008086; Noa36; MGC6718; MGC41503	MGC103365; BC008086; Noa36; MGC6718; MGC41503
Mus musculus	RefSeq	ILMN_221256	ILMN_221256	XRCC6BP1	NM_026858.2	NM_026858.2		68876	27754037	NM_026858.2	Xrcc6bp1	NP_081134.2	ILMN_1250628	006770561	S	778	GACTTCATTTCAGTCACATAACAACCTGATTAAGTAGTCGCTGTTTCTGT	10	-	126305558-126305607	10qD3	Mus musculus XRCC6 binding protein 1 (Xrcc6bp1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2410012H02Rik; 1110068E08Rik	2410012H02Rik; 1110068E08Rik
Mus musculus	Riken	ILMN_206528	ILMN_206528	D930022F04RIK	ri|D930022F04|PX00201N19|AK086339|2303					AK086339	D930022F04Rik		ILMN_1222293	002600082	S	2072	GGCTTAGCAGCAAACGCCTTTACCCATGAGCCATGCATACCACTGGCTCC										
Mus musculus	RefSeq	ILMN_216778	ILMN_216778	AMN	NM_033603.2	NM_033603.2		93835	28077082	NM_033603.2	Amn	NP_291081.2	ILMN_2675289	002510743	S	1404	CTAGGCTTCTAACCTGTGGACTGTTCACCCCCTCGGAGACCGTGACTTCT	12	+	112514356-112514405	12qF1	Mus musculus amnionless (Amn), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]		AV002116; 5033428N14Rik	AV002116; 5033428N14Rik
Mus musculus	RefSeq	ILMN_217620	ILMN_217620	CAR15	NM_030558.2	NM_030558.2		80733	31981403	NM_030558.2	Car15	NP_085035.1	ILMN_2871660	002650274	S	770	ACCACGCCGGGCTGTGAGCCAGCGGTGCTCTGGACTGTCTTTGAAAACAC	16	-	17836858-17836907	16qA3	Mus musculus carbonic anhydrase 15 (Car15), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	Cals2; AI315043	Cals2; AI315043
Mus musculus	RefSeq	ILMN_191367	ILMN_256489	VMN2R122	NM_009492.2	NM_009492.2		22308	124486730	NM_009492.2	Vmn2r122	NP_033518.2	ILMN_2478483	005050327	S	158	GAACCAAGCTGCTTTTGGAGGATAAAGAAGAGTGAAGATAATGATGGAGA					Mus musculus vomeronasal 2, receptor, 122 (Vmn2r122), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	V2r12	V2r12
Mus musculus	RefSeq	ILMN_184735	ILMN_256489	VMN2R122	NM_009492.2	NM_009492.2		22308	124486730	NM_009492.2	Vmn2r122	NP_033518.2	ILMN_2500445	006760491	S	1322	CAAGTAGAGTCTCAGAAAAAGGCAAAACCCAAAAGATATTTCACTGCTTG					Mus musculus vomeronasal 2, receptor, 122 (Vmn2r122), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	V2r12	V2r12
Mus musculus	RefSeq	ILMN_191757	ILMN_256489	VMN2R122	NM_009492.2	NM_009492.2		22308	124486730	NM_009492.2	Vmn2r122	NP_033518.2	ILMN_2481916	002630739	S	2878	CTTCCAAGTTCATGCCTTGACTTTATTCAATGTTCTATGACAAAGGTAGA					Mus musculus vomeronasal 2, receptor, 122 (Vmn2r122), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	V2r12	V2r12
Mus musculus	RefSeq	ILMN_188785	ILMN_256489	VMN2R122	NM_009492.2	NM_009492.2		22308	124486730	NM_009492.2	Vmn2r122	NP_033518.2	ILMN_2455694	001050195	S	1270	GTATAATGCTGTTTATGCTGTGGCCCACACCTACCATGAATACATTCTTC					Mus musculus vomeronasal 2, receptor, 122 (Vmn2r122), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	V2r12	V2r12
Mus musculus	Riken	ILMN_203681	ILMN_203681	9530065H03RIK	ri|9530065H03|PX00113E24|AK035553|4336					AK035553	9530065H03Rik		ILMN_1229852	001820743	S	4130	CCAAGCTAGCCAGAGTTATATAGTGAGACCATGTGTTTAAAGGGGGCGGG										
Mus musculus	RefSeq	ILMN_241505	ILMN_241505	MYOM1	NM_010867.1	NM_010867.1		17929	6754787	NM_010867.1	Myom1	NP_034997.1	ILMN_2815138	003120619	S	5402	GAAGGGCAGAGGATGTTGGAGAAGTGCTGAGCGAGAGCAGAAGTGAGGCC	17	+	71475949-71475998	17qE1.3	Mus musculus myomesin 1 (Myom1), mRNA.	Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IPI]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]	D430047A17Rik	D430047A17Rik
Mus musculus	MEEBO	ILMN_194355	ILMN_194355	NONO	scl54742.6_17				12963530	NM_023144	Nono		ILMN_2505670	002970725	S	3	TTAGTGCTAACTCAGCTTTTCTAATGTAGTTTTCACTATAGTCCTAAATA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196648	ILMN_196648	D630001M17RIK	XM_155643.2	XM_155643.2			38078212	XM_155643.2	D630001M17Rik		ILMN_1256521	000070215	S	930	CAAGCTGGTTCTAGTCGCTCTGAACAGGGGCCACACCTGCCTCTTTGTCC										
Mus musculus	RefSeq	ILMN_211137	ILMN_261462	BC062127	NM_199062.1	NM_199062.1		331188	49615104	NM_199062.1	BC062127	NP_951017.1	ILMN_2660580	000520328	S	409	CGGAAGAGTCCATACTGACGAGAAATCCTGTAAACGTAATCAGTGCAGTA	10	-	81368264-81368313	10qC1	Mus musculus cDNA sequence BC062127 (BC062127), mRNA.				A130081B01	A130081B01
Mus musculus	RefSeq	ILMN_261462	ILMN_261462	BC062127	NM_199062.1	NM_199062.1		331188	49615104	NM_199062.1	BC062127	NP_951017.1	ILMN_2902928	006760280	S	164	TATCCAGAAGATGCCCCAACAGGATGCAGTGACCTATGAGGATGTGCATG	10	-	81369310-81369338:81373633-81373644:81373645-81373653	10qC1	Mus musculus cDNA sequence BC062127 (BC062127), mRNA.				A130081B01	A130081B01
Mus musculus	RefSeq	ILMN_212038	ILMN_255721	OLFR851	NM_146905.2	NM_146905.2		258907	112982692	NM_146905.2	Olfr851	NP_667116.2	ILMN_2622050	003390561	S	664	GTGTCCTCTATTCTGAAGATCCCATCAGTTGGTGGAAGGCATAAAGCATT	9	+	19301857-19301906	9qA2	Mus musculus olfactory receptor 851 (Olfr851), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR155-1	MOR155-1
Mus musculus	Riken	ILMN_205905	ILMN_205905	A830030L24RIK	ri|A830030L24|PX00154C22|AK043768|1080					AK043768	A830030L24Rik		ILMN_1215568	006560356	S	732	CCAAGGACGAAAATGCCATAAGTCACCCCTGACACTTTTCAAGGGAGTGG										
Mus musculus	RefSeq	ILMN_234916	ILMN_234916	B930037P14RIK	NM_001024560.1	NM_001024560.1		225861	66792895	NM_001024560.1	B930037P14Rik	NP_001019731.1	ILMN_3007020	007330079	S	1263	AGCTCAAGCACGCCAAGGCCAGCACCCTGCTTCTCCAGAACACCCTTGTT	19	-	5495615-5495648:5495897-5495912	19qA	Mus musculus RIKEN cDNA B930037P14 gene (B930037P14Rik), mRNA.					
Mus musculus	Riken	ILMN_206033	ILMN_206033	ZFP46	ri|D030057J05|PX00181B09|AK051031|2917					AK051031	Zfp46		ILMN_1252865	005720400	S	527	GGCCATCTACCTCACTCGGGAAGAATGGAGACCTCTGGATCCTACACAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185550	ILMN_328552	1110029I05RIK	XM_001481271.1	XM_001481271.1		319491	149260218	XM_001481271.1	1110029I05Rik	XP_001481321.1	ILMN_2427971	001820162	S	2755	CCTTGAACACTCCAGTTGACTGCATCTGTGCTAGTGTGGTATATCATACA				9qE3.3	PREDICTED: Mus musculus RIKEN cDNA 1110029I05 gene (1110029I05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201214	ILMN_316511	AI115600	XM_001476259.1	XM_001476259.1		102442	149260033	XM_001476259.1	AI115600	XP_001476309.1	ILMN_1217575	000290139	S	2215	ACTTACGGCCAATAACACAAGCCCCGTCTGAGACAGCGACAGACGCAACC	9	+	64719785-64719834	9qC	PREDICTED: Mus musculus expressed sequence AI115600 (AI115600), mRNA.					
Mus musculus	RefSeq	ILMN_217465	ILMN_316511	AI115600	XM_001476259.1	XM_001476259.1		102442	149260033	XM_001476259.1	AI115600	XP_001476309.1	ILMN_2683486	004590341	S	8317	CAGTGTTGGATGTCCTTGCCCTCTACTCTTAGGTCTTTTCCATTCTTAGT	9	+	64767100-64767149	9qC	PREDICTED: Mus musculus expressed sequence AI115600 (AI115600), mRNA.					
Mus musculus	RefSeq	ILMN_208883	ILMN_316511	AI115600	XM_001476259.1	XM_001476259.1		102442	149260033	XM_001476259.1	AI115600	XP_001476309.1	ILMN_2590456	001980722	S	680	CCCAACTGGATTATCAGCAGACCTTAATAATGGAAGTCTTGTGGGACCCC	9	+	64686847-64686896	9qC	PREDICTED: Mus musculus expressed sequence AI115600 (AI115600), mRNA.					
Mus musculus	Riken	ILMN_204761	ILMN_204761	B930036M14RIK	ri|B930036M14|PX00164K08|AK047215|2501					AK047215	B930036M14Rik		ILMN_1229873	006220370	S	2274	GCTGCTTGTGGGAGAGAGAGATGGTTCAGTGGGCTTCCCTGGTACTTTTC										
Mus musculus	RefSeq	ILMN_221203	ILMN_221203	GIYD2	NM_029420.2	NM_029420.2		75764	62543492	NM_029420.2	Giyd2	NP_083696.2	ILMN_2966991	003830349	S	1097	TTCTCAGAGCTGGGCGGGAAAGGAAGGCGTGAAGTGGAGGCTTTGGCCTA	7	-	126482620-126482669	7qF3	Mus musculus GIY-YIG domain containing 2 (Giyd2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]	2410170E21Rik; 4833422P03Rik	2410170E21Rik; 4833422P03Rik
Mus musculus	MEEBO	ILMN_195186	ILMN_195186	2810003K23RIK	scl39279.5.1_295				51766560	XM_126677	2810003K23Rik		ILMN_2513329	006100270	S	9	GAACAGGGAGAGAGCTACAGGAGCCCTCATGAGTGTGCAGGGACTGAATC										
Mus musculus	RefSeq	ILMN_214342	ILMN_214342	COPZ2	NM_019877.1	NM_019877.1		56358	9845241	NM_019877.1	Copz2	NP_063930.1	ILMN_2878274	001440600	S	463	CGGAGCCTTCTTGGTGCTGGATGAAACTGTCGATGGAGGTGTGATTCTGG	11	+	96671388-96671423:96672762-96672775	11qD	Mus musculus coatomer protein complex, subunit zeta 2 (Copz2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence ISS]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110012D12Rik; zeta2-COP	1110012D12Rik; zeta2-COP
Mus musculus	RefSeq	ILMN_197454	ILMN_197454	LOC218889	XM_138960.1	XM_138960.1			20872435	XM_138960.1	LOC218889		ILMN_1215381	007380017	S	2002	TCCCGTGCTGTGGCTTCTGTGCTCCAGTGCTCCCATGCAGTCTCTTCTGT										
Mus musculus	RefSeq	ILMN_213855	ILMN_213855	2310008M10RIK	NM_025509.2	NM_025509.2		66357	31982672	NM_025509.2	2310008M10Rik	NP_079785.1	ILMN_2904961	000460474	S	411	TCGGCTTCGTCTGTGTTCTCCTGAGTTTCTTCATGGCCAGAGTGTTCATG	3	-	130406247-130406296	3qG3	Mus musculus RIKEN cDNA 2310008M10 gene (2310008M10Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5730557H03Rik	5730557H03Rik
Mus musculus	RefSeq	ILMN_232660	ILMN_232660	4930415L06RIK	NM_001033880.1	NM_001033880.1		245511	85702172	NM_001033880.1	4930415L06Rik	NP_001029052.1	ILMN_2879121	001090026	S	2223	AAGACAAGGAGGGGGAGAAGAAGGAGCTATTCTACCAATGGGAAGTGACT	X	-	86183161-86183210	XqC1	Mus musculus RIKEN cDNA 4930415L06 gene (4930415L06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_251301	ILMN_251301	BC062115	NM_001024626.2	NM_001024626.2		408062	110665708	NM_001024626.2	BC062115	NP_001019797.2	ILMN_2913869	005960274	S	1835	AAAGAACGCACACTGGAGAGAAGCCACATCAGTGCACTCAGTGCGGTAAG	10	+	81523866-81523915	10qC1	Mus musculus cDNA sequence BC062115 (BC062115), mRNA. XM_924416			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC102234	MGC102234
Mus musculus	MEEBO	ILMN_189108	ILMN_189108	SCL0004023.1_57	scl0004023.1_57						scl0004023.1_57		ILMN_1232512	002190301	S	2	AGACCAGCTCTGAAACTGCGCTCCTGGCCGCTGACCATCCTCCACTACCT										
Mus musculus	Riken	ILMN_202352	ILMN_202352	4930479L12RIK	ri|4930479L12|PX00032A21|AK015594|1613					AK015594	4930479L12Rik		ILMN_1244254	002810646	S	957	GCCTAAGTTGCCCTTTTGATCTTGGCAGCCAGCACCTGTGAACTCCAGCC										
Mus musculus	RefSeq	ILMN_222742	ILMN_261025	OLFR818	NM_146777.1	NM_146777.1		258773	22129296	NM_146777.1	Olfr818	NP_666988.1	ILMN_1243155	004920202	S	585	GGCTTTTGCCTTAGCTATAATGACACTTATCATTACCTTGATCTTAGTGC	10	-	129382482-129382531	10qD3	Mus musculus olfactory receptor 818 (Olfr818), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR110-2	MOR110-2
Mus musculus	MEEBO	ILMN_217103	ILMN_217103	SH3BGR	scl050795.3_8	XM_147272.1			20897167	XM_147272.1	Sh3bgr		ILMN_2679127	000460750	S	250	CGGCAAAAGAAGAAAATATTATTTATTCATTCCTTGGTCTGGCTCCCCCT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_195486	ILMN_195486	TBPL2	NM_199059.1	NM_199059.1		227606	39979629	NM_199059.1	Tbpl2	NP_951014.1	ILMN_2516015	006650484	S	960	CCCCGGCCTTATTTATAAGATGGTAAAACCACAGGTTGTGTTGCTAATCT	2	-	23931550-23931599	2qA3	Mus musculus TATA box binding protein like 2 (Tbpl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Trf3; Gm348; RP23-263E15.2	Trf3; Gm348; RP23-263E15.2
Mus musculus	RefSeq	ILMN_193847	ILMN_254701	9030617O03RIK	NM_145448.4	NM_145448.4		217830	146149333	NM_145448.4	9030617O03Rik	NP_663423.2	ILMN_1245040	004730543	S	3132	GCTTGGAAGCCTCACGGCCCAGGTCTCTTTGAGTTATCATTTTTGTTCAG				12qE	Mus musculus RIKEN cDNA 9030617O03 gene (9030617O03Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]				
Mus musculus	Riken	ILMN_203082	ILMN_203082	A430059D01RIK	ri|A430059D01|PX00136M02|AK079758|1092					AK079758	A430059D01Rik		ILMN_1240317	002120131	S	822	ATCTACCCCAAGGTGAGTTGAGGACCAGCAGTGGTTAAAATGGGGCTAAG										
Mus musculus	RefSeq	ILMN_222215	ILMN_222215	ATP1A1	NM_144900.1	NM_144900.1		11928	21450276	NM_144900.1	Atp1a1	NP_659149.1	ILMN_1218058	005290630	S	3522	CACCGTGTACGGGGACGACAGCGGGCAAGGTTTATACGTGCCTTTTTGTT	3	-	101380224-101380273	3qF2.2	Mus musculus ATPase, Na+/K+ transporting, alpha 1 polypeptide (Atp1a1), mRNA.	The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction [goid 45822] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of striated muscle contraction [goid 45989] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids [goid 31947] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of heart contraction [goid 45823] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a inorganic cations with a valency of one from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage [goid 15077] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IMP]; Catalysis of the reaction: 4-nitrophenyl phosphate + H2O = 4-nitrophenol + phosphate [goid 3869] [evidence IMP]	Atpa-1; MGC38419; BC010319	Atpa-1; MGC38419; BC010319
Mus musculus	RefSeq	ILMN_198702	ILMN_317032	LOC244061	XR_033635.1	XR_033635.1		244061	149257364	XR_033635.1	LOC244061		ILMN_1234854	002320504	S	1006	GGATTCAGTAGCCGAGATTACGTCTTGCTTCATGAGTCTTCAGACACCTC				7qD2	PREDICTED: Mus musculus similar to Smad nuclear interacting protein 1 (LOC244061), misc RNA.					
Mus musculus	MEEBO	ILMN_212380	ILMN_212380	DNB5	scl23481.9_162	NM_173774.2			31343370	NM_173774.2	Dnb5		ILMN_1242488	003440039	S	2766	CACAGCCCCCTAACACAAAGGTTCAGCTAGCCCAAGATAGGAATGCATGC										
Mus musculus	RefSeq	ILMN_218951	ILMN_312886	LOC100045668	XM_001474718.1	XM_001474718.1		100045668	149266916	XM_001474718.1	LOC100045668	XP_001474768.1	ILMN_1213781	001260438	S	672	CCTCACTGAGAAGGAACAGATCGTTCCAAAGCCAGAAGAGGAGGTTGCAC					PREDICTED: Mus musculus similar to Rpl17 protein (LOC100045668), mRNA.					
Mus musculus	Riken	ILMN_207329	ILMN_207329	5730420E01RIK	ri|5730420E01|PX00643P08|AK077483|4983					AK077483	5730420E01Rik		ILMN_2586789	001780102	S	4829	AAGGATGAGGCCCAGCAAAAAGCACCAATTACACCAGCCAGCCACTTAGG										
Mus musculus	RefSeq	ILMN_186590	ILMN_309906	LOC100046796	XM_001476827.1	XM_001476827.1		100046796	149271267	XM_001476827.1	LOC100046796	XP_001476877.1	ILMN_2736071	006350446	S	119	CCAGGGATCCCATCAGATGCAGAGAATGTGGATACAGAATAATGTACAAG					PREDICTED: Mus musculus similar to polymerase (RNA) II (DNA directed) polypeptide K (LOC100046796), mRNA.					
Mus musculus	RefSeq	ILMN_201584	ILMN_228457	PTAFR	NM_001081211.1	NM_001081211.1		19204	124487078	NM_001081211.1	Ptafr	NP_001074680.1	ILMN_1240345	005050497	S	933	AAGCGGAGGGCGCTGTGGATGGTCTGCACGGTCTTGGCGGTATTCATCAT	4	+	132135894-132135943	4qD2.3	Mus musculus platelet-activating factor receptor (Ptafr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The chemical reactions and pathways resulting in the formation of inositol trisphosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached [goid 32959] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with platelet activating factor to initiate a change in cell activity [goid 4992] [evidence IEA]; Interacting selectively with lipopolysaccharide [goid 1530] [evidence IMP]; Combining with lipopolysaccharide to initiate a change in cell activity [goid 1875] [evidence IMP]	PAFR	PAFR
Mus musculus	RefSeq	ILMN_223718	ILMN_223718	LAMB1-1	NM_008482.2	NM_008482.2		16777	114326496	NM_008482.2	Lamb1-1	NP_032508.2	ILMN_1253659	006550082	S	5414	GCCAGGAGGAAAGCTGAGCTGCTACAAAATGAAGCAAAAACACTCTTGGC	12	+	32014053-32014102	12qA2-qA3	Mus musculus laminin B1 subunit 1 (Lamb1-1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A laminin complex composed of alpha5, beta1 and gamma1 polypeptide chains [goid 43259] [evidence IPI]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any enzyme [goid 19899] [evidence IPI]	C77966; C80098; Lamb-1; C81607; D130003D08Rik	C77966; C80098; Lamb-1; C81607; D130003D08Rik
Mus musculus	RefSeq	ILMN_199755	ILMN_199755	LOC382960	XM_356773.1	XM_356773.1			38076845	XM_356773.1	LOC382960		ILMN_1227224	003190538	S	1169	GCAGGCCTCTTGGAGGAGAGAACAATGAACATACAGAGACCAGAAAGAGG										
Mus musculus	RefSeq	ILMN_223064	ILMN_223064	4921528O07RIK	XM_136353.5	XM_136353.5		78258	94364485	XM_136353.5	4921528O07Rik	XP_136353.4	ILMN_2758849	000620600	S	2652	CTGAAGCTCATTTATGATGTGGCCAGTATTAGAACCCTCGAAGGGAACGA	1	-	164954682-164954731	1qH2.1	PREDICTED: Mus musculus RIKEN cDNA 4921528O07 gene (4921528O07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215544	ILMN_215544	TMEM93	NM_025318.2	NM_025318.2		66048	142354019	NM_025318.2	Tmem93	NP_079594.1	ILMN_2660815	001070674	S	1077	GTGAGTGAAATCAGCTAAGTTCCAGTTACACCAGGTTTAGCCAGTCGCCT	11	-	72989226-72989275	11qB4	Mus musculus transmembrane protein 93 (Tmem93), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			0610025L18Rik; 0610009E20Rik; RP23-263M10.8	0610025L18Rik; 0610009E20Rik; RP23-263M10.8
Mus musculus	Riken	ILMN_205431	ILMN_205431	E330014H18RIK	ri|E330014H18|PX00212C17|AK054314|3464					AK054314	E330014H18Rik		ILMN_1230292	004230154	S	3089	GCACACCCAGGGTCAAGATAGCCACTCAGCTCCATTGTCAGGTCTTTGGA										
Mus musculus	RefSeq	ILMN_206149	ILMN_325836	LOC100041343	XM_001476613.1	XM_001476613.1		100041343	149254881	XM_001476613.1	LOC100041343	XP_001476663.1	ILMN_1213400	006580022	S	2169	GTCCAAAACAGCAGCAAGGATGACAGGAAATGTCCATCAGGAGAGATGGG	6	+	21393182-21393231	6qA2	PREDICTED: Mus musculus similar to pORF2 (LOC100041343), mRNA.					
Mus musculus	RefSeq	ILMN_206336	ILMN_325836	LOC100041343	XM_001476613.1	XM_001476613.1		100041343	149254881	XM_001476613.1	LOC100041343	XP_001476663.1	ILMN_1259553	005390400	S	1577	AGCAACAACAACAACAAAGCACATAAGCATACAGCTACCTCCTGTAAGGG	6	+	21392590-21392639	6qA2	PREDICTED: Mus musculus similar to pORF2 (LOC100041343), mRNA.					
Mus musculus	RefSeq	ILMN_217554	ILMN_320240	C230057M02RIK	XM_001478205.1	XM_001478205.1		319463	149259064	XM_001478205.1	C230057M02Rik	XP_001478255.1	ILMN_2684677	007160746	S	1478	GCTTCTCGGAGTCAGGCTACCATCCTTATGAGGTCACGGGCACAACTATG	8	-	125249372-125249421	8qE1	PREDICTED: Mus musculus RIKEN cDNA C230057M02 gene (C230057M02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214856	ILMN_214856	RAB38	NM_028238.6	NM_028238.6		72433	141801951	NM_028238.6	Rab38	NP_082514.4	ILMN_2652721	001710592	S	839	CCATTTTGGGTAAGCGTCAGGATAGGGAAGCACATGTGACAAGCCAAAGA	7	+	95639344-95639393	7qE1	Mus musculus Rab38, member of RAS oncogene family (Rab38), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AU043391; cht; MGC107581; 2310011F14Rik	AU043391; cht; MGC107581; 2310011F14Rik
Mus musculus	Riken	ILMN_203195	ILMN_203195	A930039H18RIK	ri|A930039H18|PX00067F02|AK044751|3446					AK044751	A930039H18Rik		ILMN_1216485	006270255	S	2993	CAAGTTTGGCTCTTGTCCCAGCACGACTGCATAGCTGGAATGCCTGAGGA										
Mus musculus	RefSeq	ILMN_211094	ILMN_211094	TTC30A1	NM_030188.3	NM_030188.3		78802	125988390	NM_030188.3	Ttc30a1	NP_084464.3	ILMN_2880329	000940047	S	2105	CCCTGCTGTTTTAGAACAGCCCTTAGAGGAAGAAAGAATTCACACCGGGA	2	-	75817870-75817919	2qC3	Mus musculus tetratricopeptide repeat domain 30A1 (Ttc30a1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930506L13Rik	4930506L13Rik
Mus musculus	RefSeq	ILMN_242496	ILMN_242496	CNR2	NM_009924.2	NM_009924.2		12802	31981836	NM_009924.2	Cnr2	NP_034054.2	ILMN_2794526	006590196	S	3477	CTGTAGCTGTAAGTTCGAAGCCAGCCTGAGCTAGTTGAGACCCCCTTACC	4	+	135475821-135475870	4qD3	Mus musculus cannabinoid receptor 2 (macrophage) (Cnr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with cannabinoids to initiate a change in cell activity [goid 4949] [evidence IEA]	CB2; CB2-R	CB2; CB2-R
Mus musculus	Riken	ILMN_203094	ILMN_203094	6330437B22RIK	ri|6330437B22|PX00009C08|AK031868|472					AK031868	6330437B22Rik		ILMN_1228077	002320022	S	317	TCACCAGGGCCTGGCGGACGTGATGCTCTCGGGAGCCCTCTCAAATCTTC										
Mus musculus	RefSeq	ILMN_222204	ILMN_222204	E130203B14RIK	NM_178791.4	NM_178791.4		320736	146198528	NM_178791.4	E130203B14Rik	NP_848906.1	ILMN_1246821	005420445	S	2144	CAGTGCTATTGATGCTTCTTGATGTATACTCTGGTGGCCACTTACTACAC				14qB	Mus musculus RIKEN cDNA E130203B14 gene (E130203B14Rik), mRNA.					
Mus musculus	MEEBO	ILMN_186305	ILMN_186305	SCL000244.1_65	scl000244.1_65	AK053973.1			26096091	AK053973.1	scl000244.1_65		ILMN_2434392	002000601	S	19	CAGATCAGTAGTTATAGTAAAAGCAGCCAAGAGACCGTCCGGTCTAACAG										
Mus musculus	Riken	ILMN_203338	ILMN_203338	SERPINB6	ri|9130401K15|PX00026L19|AK033731|2201					AK033731	Serpinb6		ILMN_1214464	002470121	S	1957	GACCAGGTTGGCTTCAAAATGGGCTTGGCCCTGAGATTAAATGGCGTATT										
Mus musculus	RefSeq	ILMN_212437	ILMN_241505	MYOM1	NM_010867.2	NM_010867.2		17929	145279174	NM_010867.2	Myom1	NP_034997.2	ILMN_2626442	000830187	S	5076	TTGAGGAAGGGAGCAATGGAGCCTCCCAAGGGCAACCAGAAGTCCAAGTG				17qE1.3	Mus musculus myomesin 1 (Myom1), transcript variant 1, mRNA.	Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IPI]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]	D430047A17Rik	D430047A17Rik
Mus musculus	MEEBO	ILMN_187480	ILMN_187480	SCL0003251.1_21	scl0003251.1_21	NM_145538.1			21704059	NM_145538.1	scl0003251.1_21		ILMN_2444505	000520682	S	14	CCTGGTACATTGGGGTGCTGATACATGGGGTTCTGTGGACCTGCCCATTG										
Mus musculus	RefSeq	ILMN_218885	ILMN_218885	DEFB10	NM_139225.1	NM_139225.1		246085	21327670	NM_139225.1	Defb10	NP_631971.1	ILMN_2701460	003060639	S	131	CACGGTGCTACAAGTTCGGAGGGTTCTGTCACTATAATATTTGTCCTGGT	8	+	22972316-22972365	8qA2	Mus musculus defensin beta 10 (Defb10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defb7	Defb7
Mus musculus	MEEBO	ILMN_194189	ILMN_194189	6530402F18RIK	scl076220.2_148						6530402F18Rik		ILMN_1240029	006400180	S	8	TCCAGCTCTCAACCCTGCGGCCCGTGCGCCCACCCAGCACCAGCCAGAGG										
Mus musculus	RefSeq	ILMN_213400	ILMN_213400	MCPH1	NM_173189.2	NM_173189.2		244329	37059802	NM_173189.2	Mcph1	NP_775281.2	ILMN_2830445	004220743	S	4291	GCGTTGGGTGATAGTTGATGATGTCATGTTGTTCTGGGTGATGGTTGATG	8	+	18802860-18802909	8qA1.3	Mus musculus microcephaly, primary autosomal recessive 1 (Mcph1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]			MCT; D030046N04Rik; 5430437K10Rik; BRIT1; MGC66518	MCT; D030046N04Rik; 5430437K10Rik; BRIT1; MGC66518
Mus musculus	RefSeq	ILMN_213400	ILMN_213400	MCPH1	NM_173189.2	NM_173189.2		244329	37059802	NM_173189.2	Mcph1	NP_775281.2	ILMN_2752754	000050376	S	2461	CGTACCCTGAACGTGCTGATGGGAATTGCCCGCGGCTGCTGGATTCTTTC	8	+	18671195-18671244	8qA1.3	Mus musculus microcephaly, primary autosomal recessive 1 (Mcph1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]			MCT; D030046N04Rik; 5430437K10Rik; BRIT1; MGC66518	MCT; D030046N04Rik; 5430437K10Rik; BRIT1; MGC66518
Mus musculus	RefSeq	ILMN_213400	ILMN_213400	MCPH1	NM_173189.2	NM_173189.2		244329	37059802	NM_173189.2	Mcph1	NP_775281.2	ILMN_2636685	003170669	S	2535	AGAGTTGGGCCACTGGATTTCTGAGGAGCCTTTTGAACTCTCTGAAACCT	8	+	18688996-18689045	8qA1.3	Mus musculus microcephaly, primary autosomal recessive 1 (Mcph1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]			MCT; D030046N04Rik; 5430437K10Rik; BRIT1; MGC66518	MCT; D030046N04Rik; 5430437K10Rik; BRIT1; MGC66518
Mus musculus	RefSeq	ILMN_213400	ILMN_213400	MCPH1	NM_173189.2	NM_173189.2		244329	37059802	NM_173189.2	Mcph1	NP_775281.2	ILMN_2674712	004760687	S	4341	ATGTCATGTGTTGCTGGATGATAGTTGATGATGTCACGTTGTGCTGGGTG	8	+	18802910-18802959	8qA1.3	Mus musculus microcephaly, primary autosomal recessive 1 (Mcph1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]			MCT; D030046N04Rik; 5430437K10Rik; BRIT1; MGC66518	MCT; D030046N04Rik; 5430437K10Rik; BRIT1; MGC66518
Mus musculus	RefSeq	ILMN_240480	ILMN_240480	2900024O10RIK	NM_028372.1	NM_028372.1		72852	76677919	NM_028372.1	2900024O10Rik	NP_082648.1	ILMN_3160416	006840379	S	3299	GTGCATCCTGGAGGTAACTGACCATCCTCAGACAGCATGGGCTAGAAACA	13	+	81891692-81891741	13qC3	Mus musculus RIKEN cDNA 2900024O10 gene (2900024O10Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212593	ILMN_232414	2700078E11RIK	NM_030197.1	NM_030197.1		78832	58037532	NM_030197.1	2700078E11Rik	NP_084473.1	ILMN_2639714	006200605	S	928	TTAATATAGCTCTGGGACAGTATATGGGAGCATTGCAGAGCATCGTGCCT	19	-	60621350-60621399	19qD3	Mus musculus RIKEN cDNA 2700078E11 gene (2700078E11Rik), mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	D130033C15Rik; AI450346; 9830127L17Rik; 2810417M16Rik	D130033C15Rik; AI450346; 9830127L17Rik; 2810417M16Rik
Mus musculus	RefSeq	ILMN_197377	ILMN_197377	LOC194055	XM_111824.2	XM_111824.2			38075444	XM_111824.2	LOC194055		ILMN_2527924	004670672	S	10	TCCGGAAGCTGGAAGCGGAAGCGGGCGAGCACTGTGGACCCGGAGTCTCT										
Mus musculus	RefSeq	ILMN_216111	ILMN_216111	PAQR6	NM_198410.2	NM_198410.2		68957	142354662	NM_198410.2	Paqr6	NP_940802.1	ILMN_2727184	002750632	S	161	CTGCCTTAGACTGTGTTCTCAGCTCCTTCCAGATGACTAATGAGACGGTC	3	+	88169646-88169695	3qF1	Mus musculus progestin and adipoQ receptor family member VI (Paqr6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1500001B10Rik	1500001B10Rik
Mus musculus	RefSeq	ILMN_216111	ILMN_216111	PAQR6	NM_198410.2	NM_198410.2		68957	142354662	NM_198410.2	Paqr6	NP_940802.1	ILMN_1221469	003840408	S	1680	ATCGCCATACTCCCTCTTTTGTCCTTTATGCGGTGTGTGCGGCGGTCGGG				3qF1	Mus musculus progestin and adipoQ receptor family member VI (Paqr6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1500001B10Rik	1500001B10Rik
Mus musculus	Riken	ILMN_204405	ILMN_204405	A230013K13RIK	ri|A230013K13|PX00126B13|AK038454|2598					AK038454	A230013K13Rik		ILMN_1247533	004610553	S	2376	GCGGAGTCTGAGCTGAGCATGGTTCCCTCCTGTAGATCTCCTGTTGTATC										
Mus musculus	RefSeq	ILMN_232844	ILMN_232844	AKAP2	NM_009649.2	NM_009649.2		11641	78711831	NM_009649.2	Akap2	NP_033779.2	ILMN_3116504	000620255	A	6354	AGGGTCTGTCGGTGGCAGAGGCTGGGTGGCACTGGGACTACATGGTGCAT	4	+	57909216-57909265	4qB3	Mus musculus A kinase (PRKA) anchor protein 2 (Akap2), transcript variant 3, mRNA.		Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IPI]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IPI]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IPI]	AKAP-KL; AI649048; B230340M18Rik; AA959716	AKAP-KL; AI649048; B230340M18Rik; AA959716
Mus musculus	RefSeq	ILMN_184457	ILMN_232844	AKAP2	NM_009649.2	NM_009649.2		11641	78711831	NM_009649.2	Akap2	NP_033779.2	ILMN_1249197	001820402	S	5840	CCAAAGATGGCCATCTGTTTCCTAGCTTTCCTCCCTGACAGTTCTAGTGC	4	+	57908702-57908751	4qB3	Mus musculus A kinase (PRKA) anchor protein 2 (Akap2), transcript variant 3, mRNA.		Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IPI]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IPI]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IPI]	AKAP-KL; AI649048; B230340M18Rik; AA959716	AKAP-KL; AI649048; B230340M18Rik; AA959716
Mus musculus	RefSeq	ILMN_195578	ILMN_232844	AKAP2	NM_009649.2	NM_009649.2		11641	78711831	NM_009649.2	Akap2	NP_033779.2	ILMN_2741238	001440553	S	3541	CCATAATTGCCCCAAAGAGGGGAAGTGGGGATTCAATCGCTCTTACATGT	4	+	57906403-57906452	4qB3	Mus musculus A kinase (PRKA) anchor protein 2 (Akap2), transcript variant 3, mRNA.		Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IPI]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IPI]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IPI]	AKAP-KL; AI649048; B230340M18Rik; AA959716	AKAP-KL; AI649048; B230340M18Rik; AA959716
Mus musculus	RefSeq	ILMN_187199	ILMN_187199	VIM	NM_011701.3	NM_011701.3		22352	32189314	NM_011701.3	Vim	NP_035831.2	ILMN_2451022	001690091	S	13	TGCGTGATGTGCGCCAGCAGTATGAAAGCGTGGCTGCCAAGAACCTCCAG	2	+	13495591-13495640	2qA1	Mus musculus vimentin (Vim), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; A type of intermediate filament, typically made up of one or more of the proteins vimentin, desmin, glial fibrillary acidic protein (GFAP), and peripherin. Unlike the keratins, the type III proteins can form both homo- and heteropolymeric IF filaments [goid 45098] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISO]	Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins [goid 45103] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IMP]	MGC102095	MGC102095
Mus musculus	RefSeq	ILMN_210986	ILMN_210986	GCET2	NM_008099.2	NM_008099.2		14525	31542886	NM_008099.2	Gcet2	NP_032125.2	ILMN_2979702	006560632	S	2904	GACGAAGCCCCAAAGAAACACCCACAGGTCAAGCCAATGGAGTAGATTGC	16	+	45541788-45541837	16qB5	Mus musculus germinal center expressed transcript 2 (Gcet2), mRNA.				M17; M17-L; Gcet	M17; M17-L; Gcet
Mus musculus	MEEBO	ILMN_184421	ILMN_184421	KCND1	scl55070.6_596				6680525	NM_008423	Kcnd1		ILMN_2726857	005390487	S	1656	CGTGGCAGCATGCAGGAGCTAGACACACTAGCAGGTCTTCGGAGGAGCCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184421	ILMN_184421	KCND1	scl55070.6_596				6680525	NM_008423	Kcnd1		ILMN_1241328	006560475	S	16	CTCATGGATAGTGCCTCTGCTGTTCTCTTCTGGATACCAGCTACACCAGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193456	ILMN_229179	HIST1H4B	NM_178193.1	NM_178193.1		326620	30061404	NM_178193.1	Hist1h4b	NP_835500.1	ILMN_2525620	001770273	S	32	TGGGCAAAGGTGGCGCTAAGCGCCATCGCAAAGTGCTGCGCGACAACATC	13	+	23848921-23848970	13qA3.1	Mus musculus histone cluster 1, H4b (Hist1h4b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193456	ILMN_229179	HIST1H4B	NM_178193.1	NM_178193.1		326620	30061404	NM_178193.1	Hist1h4b	NP_835500.1	ILMN_1213257	005570242	S	16	AAGGGAGGAAAAGGCCTGGGCAAAGGTGGCGCTAAGCGCCATCGCAAAGT	13	+	23848905-23848954	13qA3.1	Mus musculus histone cluster 1, H4b (Hist1h4b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221614	ILMN_221614	NRCAM	NM_176930.3	NM_176930.3		319504	142377989	NM_176930.3	Nrcam	NP_795904.2	ILMN_1245780	004830040	S	4168	CTCAGAGGCCCCTTCTCCTGTCAACGCAATGAACTCCTTTGTTTAAGTCT	12	+	45699528-45699574:45699575-45699577	12qB3	Mus musculus neuron-glia-CAM-related cell adhesion molecule (Nrcam), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A neurological process that causes the sequential depolarization of a neuron's cell membrane along an axon [goid 19227] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C030017F07Rik; Bravo; C130076O07Rik; mKIAA0343	C030017F07Rik; Bravo; C130076O07Rik; mKIAA0343
Mus musculus	RefSeq	ILMN_218847	ILMN_218847	OLFR315	NM_146538.1	NM_146538.1		258531	33238897	NM_146538.1	Olfr315	NP_666749.1	ILMN_2700931	005890112	S	648	TTCCTACTCGCTCATCCTGGCCACGGTGCTCCGCATGCGATCCTCCGCAG	11	+	58583577-58583626	11qB1.3	Mus musculus olfactory receptor 315 (Olfr315), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RP23-419P16.1; MOR278-1	RP23-419P16.1; MOR278-1
Mus musculus	MEEBO	ILMN_195495	ILMN_195495	MLLT10	scl0320393.1_3				47271506	NM_010804	Mllt10		ILMN_1242068	006960041	S	2	GGACTTGTAGTAACAGTGCCTTTTAGAATACCTTCTTAAGTACTTGGTTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195495	ILMN_195495	MLLT10	scl0320393.1_3				47271506	NM_010804	Mllt10		ILMN_2675319	006940021	S	2891	CAGGTAACCAACTGGCAATTAACGGCATCGTGGGAGCTTTAAATGGTGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_235370	ILMN_235370	TMPRSS11A	NM_001033233.1	NM_001033233.1		194597	84794608	NM_001033233.1	Tmprss11a	NP_001028405.1	ILMN_2890069	005860427	S	2035	TGAATGCGCACTTACATATTTTGGTCGCCAGGGGGAGATTTTTGTCCAGC	5	-	87485543-87485592	5qE1	Mus musculus transmembrane protease, serine 11a (Tmprss11a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Gm7	Gm7
Mus musculus	RefSeq	ILMN_217113	ILMN_217113	PITX3	NM_008852.3	NM_008852.3		18742	145966721	NM_008852.3	Pitx3	NP_032878.1	ILMN_2679243	001230520	S	1076	GCAGTAATTCACAGCCTCTCCGGACAGGGGTCGCCTAGACTGGCTTGCCC				19qC3	Mus musculus paired-like homeodomain transcription factor 3 (Pitx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Ptx3; ak	Ptx3; ak
Mus musculus	RefSeq	ILMN_208997	ILMN_208997	STK11	NM_011492.3	NM_011492.3		20869	148747310	NM_011492.3	Stk11	NP_035622.1	ILMN_2591570	007040097	S	1489	AGCCGAGGGCGGACCTGCTGCCCCAGAAGCACTTTATGTCGAGACCACTG				10qC1	Mus musculus serine/threonine kinase 11 (Stk11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AA408040; Lkb1; R75140	AA408040; Lkb1; R75140
Mus musculus	RefSeq	ILMN_189313	ILMN_189313	TPH2	NM_173391.1	NM_173391.1		216343	27734181	NM_173391.1	Tph2	NP_775567.1	ILMN_2460179	000160168	S	2451	AGGGATTTGCTTCAGTTAGGTCTGATGAGATGTGCCATGGTCATAAGCCA	10	-	114515822-114515871	10qD2	Mus musculus tryptophan hydroxylase 2 (Tph2), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation from tryptophan of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 6587] [evidence IC ]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42427] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: L-tryptophan + tetrahydrobiopterin + O2 = 5-hydroxy-L-tryptophan + 4-alpha-hydroxytetrahydrobiopterin + H2O [goid 4510] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with an amino acid, organic acids containing one or more amino substituents [goid 16597] [evidence IEA]	Ntph; AU043594; MGC159133	Ntph; AU043594; MGC159133
Mus musculus	MEEBO	ILMN_223422	ILMN_223422	D030040B21	scl18141.4.1_134				51704847	XM_488886	D030040B21		ILMN_1258891	000240010	S	2664	CTTTGGAAACCTATGTAGTATTATGTAAAACAGTTTATCTCCATTATATT										
Mus musculus	Riken	ILMN_203475	ILMN_203475	6430540M20RIK	ri|6430540M20|PX00046B20|AK032418|3074					AK032418	6430540M20Rik		ILMN_1230697	000460242	S	2856	CCTCCCCCGGAGACTCGTACAGATGACCAGACCCATAGTGTTACTACACC										
Mus musculus	RefSeq	ILMN_221136	ILMN_221136	EVL	NM_007965.2	NM_007965.2		14026	40254643	NM_007965.2	Evl	NP_031991.2	ILMN_2731454	004640463	S	1788	CAAACTTCAACTCCTGGATTTTTTAGTGTATCTGACACAGAACACCGGGT	12	+	109926393-109926442	12qF1	Mus musculus Ena-vasodilator stimulated phosphoprotein (Evl), mRNA. XM_923143	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence NAS]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [evidence IDA]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence NAS]; The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament. Nucleation is slow relative to the subsequent addition of more monomers to extend the filament [goid 45010] [evidence NAS]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence NAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]; Interacting selectively with profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin [goid 5522] [evidence IDA]	AI528774	AI528774
Mus musculus	RefSeq	ILMN_215243	ILMN_215243	SNX33	NM_175483.5	NM_175483.5		235406	142383222	NM_175483.5	Snx33	NP_780692.2	ILMN_1212693	001190470	S	4393	CTATGTTTACATCCTCCAGGCATTGCTGCCCTGTAACCCTCAGGCCTGTG	9	-	56765128-56765177	9qB	Mus musculus sorting nexin 33 (Snx33), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E130307J07Rik	E130307J07Rik
Mus musculus	RefSeq	ILMN_186463	ILMN_254173	GAPDHS	NM_008085.1	NM_008085.1		14447	6679938	NM_008085.1	Gapdhs	NP_032111.1	ILMN_2611234	006520301	S	1068	TTACTCGGCTATCACGGAGGCTGTGAAAGCTGCAGCCAAGGGACCTTTGG	7	-	31516949-31516998	7qB1	Mus musculus glyceraldehyde-3-phosphate dehydrogenase, spermatogenic (Gapdhs), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of glycolysis [goid 45821] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+ [goid 4365] [evidence TAS]; Catalysis of the reaction: glyceraldehyde 3-phosphate + (phosphate / H2O) + NAD(P)+ = (3-phospho-D-glyceroyl-phosphate / 3-phospho-D-glycerate) + NAD(P)H + H+ [goid 8943] [evidence IDA]	Gapd-s; Gapds	Gapd-s; Gapds
Mus musculus	Riken	ILMN_205030	ILMN_205030	ZNFN1A1	ri|A430081P11|PX00138G24|AK040268|913					AK040268	Znfn1a1		ILMN_2569464	006350541	S	18	TTGCTCCGTATCCAACTTAGCAGGGCACTCTAACAAGTGCCTGCGCGGCC										
Mus musculus	MEEBO	ILMN_193100	ILMN_193100	MLR2	scl6195.1.1_308				31543253	NM_172154	Mlr2		ILMN_2494121	002370653	S	16	TATAAAATAGCCATTATTGTTTTGTGAAGCATGGTTGAAATTAGATAGTG										
Mus musculus	RefSeq	ILMN_209297	ILMN_209297	TAF6L	NM_146092.1	NM_146092.1		225895	22122596	NM_146092.1	Taf6l	NP_666204.1	ILMN_2594433	002030477	S	1749	AGAAGAGCCGCTTCGCGCCCCGTGGCGCCCCACACTTCCGGTTTATAATC	19	-	8849195-8849244	19qA	Mus musculus TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor (Taf6l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51090] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	 [goid 16986] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	2810417N14Rik; BB223262; PAF65A; MGC41377; C530024J06Rik	2810417N14Rik; BB223262; PAF65A; MGC41377; C530024J06Rik
Mus musculus	RefSeq	ILMN_211779	ILMN_211779	FCRLA	NM_145141.1	NM_145141.1		98752	21553084	NM_145141.1	Fcrla	NP_660123.1	ILMN_1229840	005220176	S	364	TCAGGTTATCTTCTACCGAGAGGGCTCCGCCTTGGGTCCTCCTGGACCTA	1	-	172851764-172851813	1qH3	Mus musculus Fc receptor-like A (Fcrla), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		Freb1; mFcrX; FCRL; mFREB; FREB; Fcrlm1; FCRL1; Fcrx; BB219290	Freb1; mFcrX; FCRL; mFREB; FREB; Fcrlm1; FCRL1; Fcrx; BB219290
Mus musculus	RefSeq	ILMN_211779	ILMN_211779	FCRLA	NM_145141.1	NM_145141.1		98752	21553084	NM_145141.1	Fcrla	NP_660123.1	ILMN_2703829	001260477	S	987	CTCTCCTCGGTCATCTGGTCATGGAGCTGAGGGACTTGTCTGTCTACCTG	1	-	172848303-172848352	1qH3	Mus musculus Fc receptor-like A (Fcrla), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		Freb1; mFcrX; FCRL; mFREB; FREB; Fcrlm1; FCRL1; Fcrx; BB219290	Freb1; mFcrX; FCRL; mFREB; FREB; Fcrlm1; FCRL1; Fcrx; BB219290
Mus musculus	RefSeq	ILMN_211779	ILMN_211779	FCRLA	NM_145141.1	NM_145141.1		98752	21553084	NM_145141.1	Fcrla	NP_660123.1	ILMN_2971171	004050093	S	1057	TGCTGACAAATGAAAGTGAGCTATTCACCTGCGCTATATTCAACCACCGC	1	-	172848233-172848280:172848281-172848282	1qH3	Mus musculus Fc receptor-like A (Fcrla), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		Freb1; mFcrX; FCRL; mFREB; FREB; Fcrlm1; FCRL1; Fcrx; BB219290	Freb1; mFcrX; FCRL; mFREB; FREB; Fcrlm1; FCRL1; Fcrx; BB219290
Mus musculus	RefSeq	ILMN_211779	ILMN_211779	FCRLA	NM_145141.1	NM_145141.1		98752	21553084	NM_145141.1	Fcrla	NP_660123.1	ILMN_1236111	000670703	S	984	AGCTCTCCTCGGTCATCTGGTCATGGAGCTGAGGGACTTGTCTGTCTACC	1	-	172848306-172848355	1qH3	Mus musculus Fc receptor-like A (Fcrla), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		Freb1; mFcrX; FCRL; mFREB; FREB; Fcrlm1; FCRL1; Fcrx; BB219290	Freb1; mFcrX; FCRL; mFREB; FREB; Fcrlm1; FCRL1; Fcrx; BB219290
Mus musculus	RefSeq	ILMN_199204	ILMN_199204	LOC380723	XM_354639.1	XM_354639.1			38091779	XM_354639.1	LOC380723		ILMN_1243160	002750438	S	238	GTGCCCCAAGCCCGAGCGCAGCCGCCAGGTTCCATCTGAGGTACCCTTGA										
Mus musculus	RefSeq	ILMN_209923	ILMN_209923	OLFR536	NM_146520.2	NM_146520.2		258513	40254193	NM_146520.2	Olfr536	NP_666731.1	ILMN_2674023	000070672	S	3578	GCTTGTTTAGGTCTGTGGATTTTAGTGTGTGTATCCTATACTTAATGACT	7	-	147686977-147687026	7qF4	Mus musculus olfactory receptor 536 (Olfr536), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR252-4; MOR252-1	MOR252-4; MOR252-1
Mus musculus	RefSeq	ILMN_209923	ILMN_209923	OLFR536	NM_146520.2	NM_146520.2		258513	40254193	NM_146520.2	Olfr536	NP_666731.1	ILMN_2600483	006840044	S	2013	CCATTGTGGTGTTTGCCTATATGTGGTAGAGAGTCATGCAACTAATGCAG	7	-	147688542-147688591	7qF4	Mus musculus olfactory receptor 536 (Olfr536), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR252-4; MOR252-1	MOR252-4; MOR252-1
Mus musculus	RefSeq	ILMN_209923	ILMN_209923	OLFR536	NM_146520.2	NM_146520.2		258513	40254193	NM_146520.2	Olfr536	NP_666731.1	ILMN_1231381	002340491	S	2362	GCACTGTGGACAGGCAAGAATGGGACCAGGTGGAAGGAGAAACTAGCTTA	7	-	147688193-147688242	7qF4	Mus musculus olfactory receptor 536 (Olfr536), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR252-4; MOR252-1	MOR252-4; MOR252-1
Mus musculus	RefSeq	ILMN_237873	ILMN_237873	KRT77	NM_001003667.1	NM_001003667.1		406220	51092292	NM_001003667.1	Krt77	NP_001003667.1	ILMN_3160227	007380767	S	1261	GAAAGGGCTCTCCAGAACGCCAAGCAGAAGCTGCAAGACATGGAAGAGGC	15	-	101691445-101691494	15qF3	Mus musculus keratin 77 (Krt77), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	mK1b; Krt2-39; keratin 1b; K1-emb; 4732484G22Rik	mK1b; Krt2-39; keratin 1b; K1-emb; 4732484G22Rik
Mus musculus	RefSeq	ILMN_197956	ILMN_197956	LOC381052	XM_354967.1	XM_354967.1			38079830	XM_354967.1	LOC381052		ILMN_1256513	007610102	S	300	TAAGGAAGTCAGGAAGCCTGCTTTGGATGTGCGAGGGGTTTCCTGCAGGG										
Mus musculus	MEEBO	ILMN_189615	ILMN_189615	0610012A05RIK	scl47331.6_185				21539602	NM_026153	0610012A05Rik		ILMN_1230831	006900731	S	1	AAGGAAGTTATAGGTGAGAGGCTTGTGGAGAGGGGCTAACTCCAGTCCCC										
Mus musculus	MEEBO	ILMN_186932	ILMN_186932	4930547E08RIK	scl18931.4.1_71						4930547E08Rik		ILMN_2439723	002900278	S	1	TCACTCTCCTGGGGTTGAAAATGAGGTCACATTCCTCTCAGTGCTCCAAT										
Mus musculus	RefSeq	ILMN_222641	ILMN_222641	HSD17B4	NM_008292.2	NM_008292.2		15488	31982272	NM_008292.2	Hsd17b4	NP_032318.2	ILMN_2912239	000990685	S	2270	AAATACTGTCTACCCAGCTGAGCCGCAGCCTTCTGCGATCCACAGGAGTG	18	+	50355651-50355700	18qD1	Mus musculus hydroxysteroid (17-beta) dehydrogenase 4 (Hsd17b4), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IMP]; The process whose specific outcome is the progression of a Sertoli cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a Sertoli cell fate [goid 60009] [evidence IMP]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA];  [goid 5498] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+ [goid 3857] [evidence IEA]; Catalysis of the reaction: (24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestanoyl-CoA = (24E)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA + H2O [goid 33989] [evidence IEA]	MFE-2; Mfp-2; MFP2; AW208803; 17[b]-HSD; perMFE-2	MFE-2; Mfp-2; MFP2; AW208803; 17[b]-HSD; perMFE-2
Mus musculus	RefSeq	ILMN_233907	ILMN_233907	TXNIP	NM_001009935.2	NM_001009935.2		56338	118131130	NM_001009935.2	Txnip	NP_001009935.1	ILMN_3112873	006250193	A	2503	GGGCACAGAAGCCCCCAGACCCCATTTCCTGTCCAGTGTTGGGAGAAAGT	3	+	96364250-96364282:96364148-96364164	3qF2.1	Mus musculus thioredoxin interacting protein (Txnip), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hyplip1; VDUP1; THIF; 1200008J08Rik; AA682105	Hyplip1; VDUP1; THIF; 1200008J08Rik; AA682105
Mus musculus	RefSeq	ILMN_199433	ILMN_199433	OLFR320	NM_207230.1	NM_207230.1		216783	46402210	NM_207230.1	Olfr320	NP_997113.1	ILMN_2535194	005340148	S	241	GTGGCAGCTAACTTCCTCTCAGACACCAAGGCCATTTCCTTTCTGGGCTG	11	+	58497617-58497666	11qB1.3	Mus musculus olfactory receptor 320 (Olfr320), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RP23-128D9.8; MOR285-5; GA_x6K02T2NKPP-730312-729392	RP23-128D9.8; MOR285-5; GA_x6K02T2NKPP-730312-729392
Mus musculus	RefSeq	ILMN_199433	ILMN_199433	OLFR320	NM_207230.1	NM_207230.1		216783	46402210	NM_207230.1	Olfr320	NP_997113.1	ILMN_1236773	001010743	S	768	CTCCACATATACCCAGCCACACTCCTTGCATTCTCCTGGAAGGGACAAAG	11	+	58498144-58498193	11qB1.3	Mus musculus olfactory receptor 320 (Olfr320), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RP23-128D9.8; MOR285-5; GA_x6K02T2NKPP-730312-729392	RP23-128D9.8; MOR285-5; GA_x6K02T2NKPP-730312-729392
Mus musculus	RefSeq	ILMN_199433	ILMN_199433	OLFR320	NM_207230.1	NM_207230.1		216783	46402210	NM_207230.1	Olfr320	NP_997113.1	ILMN_2949449	001660546	S	799	TCTCCTGGAAGGGACAAAGTAGTGGCTGTGCTCTACTCAATCGTCACCCT	11	+	58498175-58498224	11qB1.3	Mus musculus olfactory receptor 320 (Olfr320), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RP23-128D9.8; MOR285-5; GA_x6K02T2NKPP-730312-729392	RP23-128D9.8; MOR285-5; GA_x6K02T2NKPP-730312-729392
Mus musculus	RefSeq	ILMN_213530	ILMN_213530	CD2AP	NM_009847.3	NM_009847.3		12488	125987598	NM_009847.3	Cd2ap	NP_033977.3	ILMN_2637981	002370239	S	5245	GTTTTGACAATCTAACATTCCAAAGTCCACATATATATCTTAAAAGTCTT	17	-	42930004-42930053	17qB3	Mus musculus CD2-associated protein (Cd2ap), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	METS-1; AL024079; C78928	METS-1; AL024079; C78928
Mus musculus	RefSeq	ILMN_210419	ILMN_210419	KRT6A	NM_008476.3	NM_008476.3		16687	54607170	NM_008476.3	Krt6a	NP_032502.3	ILMN_1228295	003990086	S	880	GCCAAGGCAGACAGTCTAACAGATGATATCAACTTCTTGAGAGCTCTCTA	15	-	101522918-101522967	15qF2	Mus musculus keratin 6A (Krt6a), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]	Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [evidence IGI]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IGI]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt2-6c; MK6a; mK6[a]; 2310016L08Rik; Krt2-6a	Krt2-6c; MK6a; mK6[a]; 2310016L08Rik; Krt2-6a
Mus musculus	RefSeq	ILMN_210419	ILMN_210419	KRT6A	NM_008476.3	NM_008476.3		16687	54607170	NM_008476.3	Krt6a	NP_032502.3	ILMN_2738369	000840528	S	876	GCAAGCCAAGGCAGACAGTCTAACAGATGATATCAACTTCTTGAGAGCTC	15	-	101522922-101522971	15qF2	Mus musculus keratin 6A (Krt6a), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]	Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [evidence IGI]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IGI]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt2-6c; MK6a; mK6[a]; 2310016L08Rik; Krt2-6a	Krt2-6c; MK6a; mK6[a]; 2310016L08Rik; Krt2-6a
Mus musculus	RefSeq	ILMN_244385	ILMN_244385	4921501E09RIK	NM_001009544.1	NM_001009544.1		74042	57222273	NM_001009544.1	4921501E09Rik	NP_001009544.1	ILMN_2833993	001990402	S	2365	GAAAGTGAGGCGGGAAATGCTTGTGTAGATGAACAGGGCAGCTTAGGAGC	17	-	33202357-33202406	17qB1	Mus musculus RIKEN cDNA 4921501E09 gene (4921501E09Rik), mRNA.				PHF8	PHF8
Mus musculus	RefSeq	ILMN_189720	ILMN_189720	TMC6	NM_145439.1	NM_145439.1		217353	21703875	NM_145439.1	Tmc6	NP_663414.2	ILMN_1213001	005490079	S	11	CCTGCAAGCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGA	11	-	117641862-117641911	11qE2	Mus musculus transmembrane channel-like gene family 6 (Tmc6), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			D11Ertd204e; EVER1	D11Ertd204e; EVER1
Mus musculus	RefSeq	ILMN_189720	ILMN_189720	TMC6	NM_145439.1	NM_145439.1		217353	21703875	NM_145439.1	Tmc6	NP_663414.2	ILMN_2471166	007100300	S	2580	TCCTGCAAGCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAG	11	-	117627506-117627555	11qE2	Mus musculus transmembrane channel-like gene family 6 (Tmc6), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			D11Ertd204e; EVER1	D11Ertd204e; EVER1
Mus musculus	RefSeq	ILMN_189720	ILMN_189720	TMC6	NM_145439.1	NM_145439.1		217353	21703875	NM_145439.1	Tmc6	NP_663414.2	ILMN_2513778	007570475	S	2584	GCAAGCAGAGACTTGGACCTGAGATCCCCACAGGATGTGGCAGTAGAGTG	11	-	117627502-117627551	11qE2	Mus musculus transmembrane channel-like gene family 6 (Tmc6), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			D11Ertd204e; EVER1	D11Ertd204e; EVER1
Mus musculus	RefSeq	ILMN_224512	ILMN_224512	VEGFA	NM_001025250.2	NM_001025250.2		22339	118131137	NM_001025250.2	Vegfa	NP_001020421.1	ILMN_3045723	004890068	I	819	CAGTTCGAGGAAAGGGAAAGGGTCAAAAACGAAAGCGCAAGAAATCCCGG	17	-	46159242-46159291	17qC	Mus musculus vascular endothelial growth factor A (Vegfa), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process involved in the maintenance of an equilibrium of the surface-active lipoprotein mixture which coats the alveoli [goid 43129] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence IDA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	VEGF120; VPF; VEGF-A; Vegf	VEGF120; VPF; VEGF-A; Vegf
Mus musculus	RefSeq	ILMN_224512	ILMN_224512	VEGFA	NM_001025250.2	NM_001025250.2		22339	118131137	NM_001025250.2	Vegfa	NP_001020421.1	ILMN_3121255	002030739	A	2128	GGCAGGACCCGCAAGCCCCTCACGGAGGCAGAGAAAAGAGAAAGTGTTTT	17	-	46154668-46154717	17qC	Mus musculus vascular endothelial growth factor A (Vegfa), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process involved in the maintenance of an equilibrium of the surface-active lipoprotein mixture which coats the alveoli [goid 43129] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence IDA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	VEGF120; VPF; VEGF-A; Vegf	VEGF120; VPF; VEGF-A; Vegf
Mus musculus	MEEBO	ILMN_220161	ILMN_220161	D7BWG0611E	scl052857.1_311	NM_027898.2			26665872	NM_027898.2	D7Bwg0611e		ILMN_2756438	003310523	S	555	AGTGCTATGGCTCGGAGCTGGGCCTCACCAGTGAAGACGAAGACTATGTC										
Mus musculus	RefSeq	ILMN_188537	ILMN_248108	BCL7A	NM_029850.2	NM_029850.2		77045	31542219	NM_029850.2	Bcl7a	NP_084126.1	ILMN_1252601	000650110	S	3503	GACGGTGTCGTGGTTTGGAATGTTAATTATCGCAGAGGACCTGGTAGAGG	5	+	123823872-123823921	5qF	Mus musculus B-cell CLL/lymphoma 7A (Bcl7a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4432415N06Rik; AI448316	4432415N06Rik; AI448316
Mus musculus	RefSeq	ILMN_214082	ILMN_231978	2810032E02RIK	XM_894566.3	XM_894566.3		72661	149265684	XM_894566.3	2810032E02Rik	XP_899659.3	ILMN_2644068	002350670	S	785	GGTTTCACTGTGGTGTGCATGTGGCCCTCTGAGCGACCACCCCTTTACAT	14	-	76932684-76932733	14qD3	PREDICTED: Mus musculus RIKEN cDNA 2810032E02 gene (2810032E02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209933	ILMN_209933	OLFR551	NM_146755.1	NM_146755.1		258750	22129334	NM_146755.1	Olfr551	NP_666966.1	ILMN_2600568	006580445	S	765	AGGGCTCTTCTCATTCTATACCCAGCGCTTTGGTCAACATGTACCCAGGC	7	-	109736441-109736490	7qE3	Mus musculus olfactory receptor 551 (Olfr551), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR29-1	MOR29-1
Mus musculus	RefSeq	ILMN_214089	ILMN_214089	9830169C18RIK	NM_172581.1	NM_172581.1		217705	27369821	NM_172581.1	9830169C18Rik	NP_766169.1	ILMN_2962095	001070440	S	3217	GTCTCCACACTAGAGGATAATTATGCAAGTCGATAGCAAATGCAGAGCGG	12	-	85235155-85235204	12qD1	Mus musculus RIKEN cDNA 9830169C18 gene (9830169C18Rik), mRNA.				9330169D17	9330169D17
Mus musculus	RefSeq	ILMN_237661	ILMN_237661	DAAM1	NM_026102.2	NM_026102.2		208846	78191776	NM_026102.2	Daam1	NP_080378.2	ILMN_3031523	005720458	I	120	GTGAGGGGACTCCTCGGCTCGCCCGCCGCACTCATTCATTAGCGGCACCG	12	+	72932184-72932233	12qC3	Mus musculus dishevelled associated activator of morphogenesis 1 (Daam1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	E130308H01; 1700066F09Rik; AI503486; 2310028E21Rik; mKIAA0666	E130308H01; 1700066F09Rik; AI503486; 2310028E21Rik; mKIAA0666
Mus musculus	RefSeq	ILMN_237661	ILMN_237661	DAAM1	NM_026102.2	NM_026102.2		208846	78191776	NM_026102.2	Daam1	NP_080378.2	ILMN_3104857	002810561	A	5310	AAAGCAGAGCTGACTCTCCCAGCCCCGCGCTAACCACAGGCTGCAAGCAT	12	+	73092660-73092709	12qC3	Mus musculus dishevelled associated activator of morphogenesis 1 (Daam1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	E130308H01; 1700066F09Rik; AI503486; 2310028E21Rik; mKIAA0666	E130308H01; 1700066F09Rik; AI503486; 2310028E21Rik; mKIAA0666
Mus musculus	RefSeq	ILMN_232528	ILMN_232528	LAMC1	NM_010683.1	NM_010683.1		226519	31791056	NM_010683.1	Lamc1	NP_034813.1	ILMN_2974798	005050427	S	7038	GGCGTCGGCCTCACCAAGTTCAGTGCTGATTGGCTAGTTCCTCTATTCCG	1	-	155066586-155066635	1qG3	Mus musculus laminin, gamma 1 (Lamc1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A laminin complex composed of alpha5, beta1 and gamma1 polypeptide chains [goid 43259] [evidence IPI]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Lamb2	Lamb2
Mus musculus	RefSeq	ILMN_259434	ILMN_259434	DYNC2LI1	NM_172256.1	NM_172256.1		213575	26986540	NM_172256.1	Dync2li1	NP_758460.1	ILMN_3090123	007160441	A	1094	AGAAGCTCCTCTAAGACCTGGAAGCAAATCGAGCTGGACTCCTGACCCGC	17	+	85054669-85054703:85054704-85054718	17qE4	Mus musculus dynein cytoplasmic 2 light intermediate chain 1 (Dync2li1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	CGI-60; MGC7211; LIC3; MGC40646; mD2LIC; 4933404O11Rik; D2lic	CGI-60; MGC7211; LIC3; MGC40646; mD2LIC; 4933404O11Rik; D2lic
Mus musculus	MEEBO	ILMN_195608	ILMN_195608	MRPS12	scl31573.3_3				31981352	NM_011885	Mrps12		ILMN_2777706	000580400	S	661	GTGCGTCCATGTTCAGTGTTTGCAGGTTGACCTCATGTGCTGGGATGGGG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200613	ILMN_200613	LOC384399	XM_357621.1	XM_357621.1			38084281	XM_357621.1	LOC384399		ILMN_1257708	003850563	S	482	TGCGTGCAGATATGGGGCTTCCTTACACCCAGGACAGAAGCACAGTTGGT										
Mus musculus	RefSeq	ILMN_221952	ILMN_221952	PLEC1	NM_201390.1	NM_201390.1		18810	41322932	NM_201390.1	Plec1	NP_958792.1	ILMN_2742551	004280228	S	82	CCCGCTCCCCGTTGGCCCTGTGGGCTCCTGCCGCTGTCCCCAATGAAGAT	15	-	76030906-76030914:76030915-76030955	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 7, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; AA591047; AU042537; PLTN; PCN	EBS1; AA591047; AU042537; PLTN; PCN
Mus musculus	Riken	ILMN_205914	ILMN_205914	PCSK1	ri|A830027E14|PX00154M13|AK043742|1420					AK043742	Pcsk1		ILMN_2576158	006770064	S	1273	GCTACCTTAAATGCCAAAAAGGAGAATCATTAGCTGCTTTGTTCAGTGTG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [evidence IDA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IDA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214019	ILMN_214019	CTF2	NM_198858.1	NM_198858.1		244218	38524597	NM_198858.1	Ctf2	NP_942155.1	ILMN_2643343	000730435	S	581	GAATATGGTCACTGGACAGACCGGGCTGTGAGGGACTTGGCTCTCCTCAA	7	-	134862743-134862792	7qF3	Mus musculus cardiotrophin 2 (Ctf2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the ciliary neurotrophic factor receptor [goid 5127] [evidence IPI]; Interacting selectively with the leukemia inhibitory factor receptor [goid 5146] [evidence IPI]	Gm494; NP	Gm494; NP
Mus musculus	RefSeq	ILMN_218489	ILMN_230266	POLR3C	XM_908475.2	XM_908475.2		74414	94370171	XM_908475.2	Polr3c	XP_913568.1	ILMN_2696471	006550445	S	1853	CATCTTCTTACTGGAATCATACATTGAGAGCACCATGAAGAGGCAGTGAC				3qF2.1	PREDICTED: Mus musculus polymerase (RNA) III (DNA directed) polypeptide C, transcript variant 7 (Polr3c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198159	ILMN_244483	BTNL2	NM_079835.2	NM_079835.2		547431	145386587	NM_079835.2	Btnl2	NP_524574.1	ILMN_2530687	005090634	S	1417	CACGGCCCCATGTGCAGTGGAGGGACAGAGATGGAAAGACAATGCCATCG				17qB1	Mus musculus butyrophilin-like 2 (Btnl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BTL-II; NG9; Gm315; Btl2	BTL-II; NG9; Gm315; Btl2
Mus musculus	RefSeq	ILMN_248706	ILMN_248706	LOC666244	NM_001081983.1	NM_001081983.1		666244	126517490	NM_001081983.1	LOC666244	NP_001075452.1	ILMN_2897760	005080020	S	203	ACTCTTCCGTCGAATGAAACTATCCAGCAAGAGAAAGAACATAATGAAAG	X	-	133508747-133508778:133509937-133509954	XqF1	Mus musculus thymosin beta-like (LOC666244), mRNA.					
Mus musculus	Riken	ILMN_205776	ILMN_205776	D130067E14RIK	ri|D130067E14|PX00185K03|AK051713|3258					AK051713	D130067E14Rik		ILMN_1215831	003800682	S	3070	CTTTTGAAGAGACCATTTGGAAGCACTGGGATGGGGCGGTGATTCAGAGG										
Mus musculus	MEEBO	ILMN_186223	ILMN_186223	2700055A20RIK	scl0078729.1_67				42734464	NM_027314	2700055A20Rik		ILMN_2433676	002140301	S	2	CAGGTTCACCATTCTCTATTCAGTGACACTACTTTTGATGTGAAGGTCTA										
Mus musculus	MEEBO	ILMN_186223	ILMN_186223	2700055A20RIK	scl0078729.1_67				42734464	NM_027314	2700055A20Rik		ILMN_2719498	007510035	S	1244	AGGAATAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTA										
Mus musculus	RefSeq	ILMN_209200	ILMN_209200	OPN1SW	NM_007538.2	NM_007538.2		12057	31543369	NM_007538.2	Opn1sw	NP_031564.1	ILMN_2593541	004890142	S	1782	CCCCTCGAAACGAAGAAGTGCGTGTTGAGTTATACGCAAGGAGTGCTGGG	6	-	29327216-29327265	6qA3.3	Mus musculus opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) (Opn1sw), mRNA.	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Bcp; AW551857	Bcp; AW551857
Mus musculus	RefSeq	ILMN_209200	ILMN_209200	OPN1SW	NM_007538.2	NM_007538.2		12057	31543369	NM_007538.2	Opn1sw	NP_031564.1	ILMN_2893131	001340600	S	2189	CAGTTGTAAGCTGCTATGTGGGTGCTGGAAATTGAACCCAGGTCCTGAGG	6	-	29326809-29326858	6qA3.3	Mus musculus opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) (Opn1sw), mRNA.	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Bcp; AW551857	Bcp; AW551857
Mus musculus	RefSeq	ILMN_218860	ILMN_218860	5730453I16RIK	NM_172302.2	NM_172302.2		269061	31982054	NM_172302.2	5730453I16Rik	NP_758506.2	ILMN_1220263	004890156	S	2045	CCTAGCCGGTTGAGGAGGGACCATGAGAACAGAAATTACCTTGTGACAAG	19	+	10620688-10620737	19qA	Mus musculus RIKEN cDNA 5730453I16 gene (5730453I16Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC46982; AL022757; C330017N18Rik	MGC46982; AL022757; C330017N18Rik
Mus musculus	RefSeq	ILMN_218860	ILMN_218860	5730453I16RIK	NM_172302.2	NM_172302.2		269061	31982054	NM_172302.2	5730453I16Rik	NP_758506.2	ILMN_2826342	004260279	S	3144	CCCTAAACCGATCCCTATTCCATCAACATGGCACCCTGCCTCATTGGCTA	19	+	10621787-10621836	19qA	Mus musculus RIKEN cDNA 5730453I16 gene (5730453I16Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC46982; AL022757; C330017N18Rik	MGC46982; AL022757; C330017N18Rik
Mus musculus	RefSeq	ILMN_219633	ILMN_219633	RPL39	NM_026055.1	NM_026055.1		67248	13385551	NM_026055.1	Rpl39	NP_080331.1	ILMN_2711551	001690097	S	96	GGCCAAGAAACAAAAGCAAAATCGCCCTATTCCTCAGTGGATCCGGATGA	X	-	34623998-34624047	XqA3.3	Mus musculus ribosomal protein L39 (Rpl39), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810465O16Rik	2810465O16Rik
Mus musculus	MEEBO	ILMN_192598	ILMN_192598	9430064K01RIK	scl38805.1.1_125						9430064K01Rik		ILMN_2489564	006520575	S	6	CCCAGCATGCAAGCGCGTTGATACTCTCCACTGTGGACTTAGTCAGGAGT										
Mus musculus	RefSeq	ILMN_214543	ILMN_214543	ANKMY1	NM_172850.2	NM_172850.2		241158	142356868	NM_172850.2	Ankmy1	NP_766438.1	ILMN_2723839	006980121	S	3145	GGTTGCACCCTGTGGTAGCCTGACACAAGAAGTGTCTGCACGATGACAGC	1	-	94766757-94766806	1qD	Mus musculus ankyrin repeat and MYND domain containing 1 (Ankmy1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC141406; 4930483I10Rik; ZMYND13	MGC141406; 4930483I10Rik; ZMYND13
Mus musculus	RefSeq	ILMN_214543	ILMN_214543	ANKMY1	NM_172850.2	NM_172850.2		241158	142356868	NM_172850.2	Ankmy1	NP_766438.1	ILMN_2649076	002940255	S	2307	AGGGACATCGTGCGGCTCCTTCTGTCCCACAGAGCGAATCCAAACGTGCT	1	-	94775942-94775991	1qD	Mus musculus ankyrin repeat and MYND domain containing 1 (Ankmy1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC141406; 4930483I10Rik; ZMYND13	MGC141406; 4930483I10Rik; ZMYND13
Mus musculus	MEEBO	ILMN_189280	ILMN_189280	IGKV4-53_AJ231231_IG_KAPPA_VARIABLE_4-53_12	IGKV4-53_AJ231231_Ig_kappa_variable_4-53_12						IGKV4-53_AJ231231_Ig_kappa_variable_4-53_12		ILMN_2459911	005720750	S	6	GATTTTCAGCTTCATGCTAATCAGTGTCACAGTCATATTGTCCAGTGGAG										
Mus musculus	RefSeq	ILMN_186517	ILMN_319307	LOC100039093	XR_030632.1	XR_030632.1		100039093	149250471	XR_030632.1	LOC100039093		ILMN_1247042	005900102	S	558	CAGGAGACGAACCATATGAATGTAACCACTGTGTTAAAGCCTTTGCAAAA	2	-	176319826-176319875	2qH4	PREDICTED: Mus musculus similar to novel KRAB box and zinc finger, C2H2 type domain containing protein (LOC100039093), misc RNA.					
Mus musculus	RefSeq	ILMN_211231	ILMN_211231	MGST2	NM_174995.2	NM_174995.2		211666	95007016	NM_174995.2	Mgst2	NP_778160.2	ILMN_2613832	007330292	S	446	CCTGAACGAATACCTGGACTTTCATGTTGCCAAGAAACTGAGGAAGCCCT	3	+	51486454-51486503	3qC	Mus musculus microsomal glutathione S-transferase 2 (Mgst2), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGST-II; GST2; MGC41409	MGST-II; GST2; MGC41409
Mus musculus	RefSeq	ILMN_198732	ILMN_250519	OLFR467	NM_001005488.1	NM_001005488.1		257919	53828689	NM_001005488.1	Olfr467	NP_001005488.1	ILMN_1224282	006200195	S	535	TGTGACCTCCCACCACTGGTGGAGCTGTCCTGTACCCATGTTTATGTTGC	7	+	114958634-114958683	7qE3	Mus musculus olfactory receptor 467 (Olfr467), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	GA_x5J8B7W6B6J-2556603-2556836; MOR204-33P	GA_x5J8B7W6B6J-2556603-2556836; MOR204-33P
Mus musculus	RefSeq	ILMN_250519	ILMN_250519	OLFR467	NM_001005488.1	NM_001005488.1		257919	53828689	NM_001005488.1	Olfr467	NP_001005488.1	ILMN_2884460	002060605	S	676	CTCAGGATGCGCTCTACTGAGGGCAGGCACAAGGCCTTCTCCACCTGCAC	7	+	114958775-114958824	7qE3	Mus musculus olfactory receptor 467 (Olfr467), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	GA_x5J8B7W6B6J-2556603-2556836; MOR204-33P	GA_x5J8B7W6B6J-2556603-2556836; MOR204-33P
Mus musculus	RefSeq	ILMN_189215	ILMN_253970	ENPEP	NM_007934.3	NM_007934.3		13809	124286800	NM_007934.3	Enpep	NP_031960.1	ILMN_2654664	004900670	S	3433	GGAGCAATTTGGTCCTAGCTTTACATTTTTAGTACCAAAGAAACACCACT	3	-	128972820-128972869	3qG3	Mus musculus glutamyl aminopeptidase (Enpep), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISO]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence ISO]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	APA; Ly-51; Bp-1/6C3; Ly51; 6030431M22Rik	APA; Ly-51; Bp-1/6C3; Ly51; 6030431M22Rik
Mus musculus	RefSeq	ILMN_191118	ILMN_258437	OSBPL7	NM_001081434.1	NM_001081434.1		71240	124487450	NM_001081434.1	Osbpl7	NP_001074903.1	ILMN_2476272	000510343	S	2880	CGGAACGGGAATCCGTGCTTTCCCCGTCTTGTGACCCCAAATCTGGCATG	11	+	96929563-96929612	11qD	Mus musculus oxysterol binding protein-like 7 (Osbpl7), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]		4933437E18Rik	4933437E18Rik
Mus musculus	RefSeq	ILMN_201601	ILMN_258437	OSBPL7	NM_001081434.1	NM_001081434.1		71240	124487450	NM_001081434.1	Osbpl7	NP_001074903.1	ILMN_1227728	007210601	S	2513	GCGAGACCGGAGAAGGGTGATGGAAGAAAATAACATAGTCCACCAGGCGC	11	+	96929042-96929091	11qD	Mus musculus oxysterol binding protein-like 7 (Osbpl7), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]		4933437E18Rik	4933437E18Rik
Mus musculus	RefSeq	ILMN_213649	ILMN_213649	NDEL1	NM_023668.1	NM_023668.1		83431	12963776	NM_023668.1	Ndel1	NP_076157.1	ILMN_2639296	000290468	S	2000	GCTCTCGGGGGCAGACTGGCTAGGTGTTTGTCCCTTGCACCCTATGATTA	11	-	68635195-68635244	11qB3	Mus musculus nuclear distribution gene E-like homolog 1 (A. nidulans) (Ndel1), mRNA.	Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IGI]; The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IDA]; The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; Generation of a long process from a neuron whose cell body resides in the central nervous system. The process carries efferent (outgoing) action potentials from the cell body towards target cells [goid 21955] [evidence IMP]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2600006O07Rik; MITAP1; NUDEL	2600006O07Rik; MITAP1; NUDEL
Mus musculus	RefSeq	ILMN_213237	ILMN_213237	CREB3	NM_013497.3	NM_013497.3		12913	141801684	NM_013497.3	Creb3	NP_038525.2	ILMN_1216285	000540037	S	1255	GCGAGGGATGGCAACCTAACCACAGCCCTTCTTTGGTCATCTTTCAGGGC	4	+	43579605-43579654	4qB1	Mus musculus cAMP responsive element binding protein 3 (Creb3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	AU044960; Luman; LZIP-2; AW538053; C80076; LZIP-1	AU044960; Luman; LZIP-2; AW538053; C80076; LZIP-1
Mus musculus	RefSeq	ILMN_218365	ILMN_213237	CREB3	NM_013497.3	NM_013497.3		12913	141801684	NM_013497.3	Creb3	NP_038525.2	ILMN_1256905	006290056	S	1524	GGCCAGTAAATGTCTCCAAATCTATTCACGGGGCAACAGATACATATGGG	4	+	43579874-43579923	4qB1	Mus musculus cAMP responsive element binding protein 3 (Creb3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	AU044960; Luman; LZIP-2; AW538053; C80076; LZIP-1	AU044960; Luman; LZIP-2; AW538053; C80076; LZIP-1
Mus musculus	RefSeq	ILMN_201047	ILMN_201047	LOC384727	XM_357823.1	XM_357823.1			38088141	XM_357823.1	LOC384727		ILMN_1252958	001170086	S	495	GCTCCACATGAAGACATGCACCACCGTTGCCTTCACACACGTTAACTCTG										
Mus musculus	RefSeq	ILMN_218677	ILMN_218677	SLC35F3	NM_175434.3	NM_175434.3		210027	126723625	NM_175434.3	Slc35f3	NP_780643.2	ILMN_2698880	005130424	S	2190	GGAGAACTCAGTGCCTTCTACAGCATCTCTGTCCTATGTGAAGCGAGGTG	8	+	128919284-128919333	8qE2	Mus musculus solute carrier family 35, member F3 (Slc35f3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC141264; B230375D17Rik; MGC141263	MGC141264; B230375D17Rik; MGC141263
Mus musculus	RefSeq	ILMN_223926	ILMN_247283	POLR2C	NM_009090.4	NM_009090.4		20021	118130554	NM_009090.4	Polr2c	NP_033116.2	ILMN_1226263	005870424	S	1104	CAGCACGGAAAAGAAGGAATATTTATTGATCAACAGTAGTTGTCTTTTTA	8	+	97387721-97387770	8qD1	Mus musculus polymerase (RNA) II (DNA directed) polypeptide C (Polr2c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rpo2-3; 33kDa; mRBP31; RPB3; MGC118242	Rpo2-3; 33kDa; mRBP31; RPB3; MGC118242
Mus musculus	RefSeq	ILMN_184683	ILMN_312283	LOC671878	XM_001473434.1	XM_001473434.1		671878	149271662	XM_001473434.1	LOC671878	XP_001473484.1	ILMN_1217489	000110452	S	250	ATCCACATGGATTGGTGTTGCTGGACCTTCAGAGTTACGACAGTGATGTG	X	-	60029620-60029669	XqA6	PREDICTED: Mus musculus similar to spermine synthase (LOC671878), mRNA.					
Mus musculus	Riken	ILMN_203880	ILMN_203880	GLB1	ri|A630055M18|PX00146H17|AK042069|2717					AK042069	Glb1		ILMN_2560675	005340553	S	2172	GCTGTGGCCATTTGCTCTTCATTGGGACAGTTGTGGGAAAAGCTCACAAG						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A multimeric enzyme complex that in E. coli is a heterooctamer made up of four alpha subunits and four beta subunits. Catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides [goid 9341] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]		
Mus musculus	Riken	ILMN_206808	ILMN_206808	D630024O11RIK	ri|D630024O11|PX00197C16|AK085436|1045					AK085436	D630024O11Rik		ILMN_2582841	000050685	S	101	CTCCCTGCGGCGGGAGTTGCCAGAGCCCAGGTTTGCTCTGTCGTCTGCTG										
Mus musculus	RefSeq	ILMN_222763	ILMN_222763	E330009P21RIK	NM_177069.3	NM_177069.3		320082	142388093	NM_177069.3	E330009P21Rik	NP_796043.1	ILMN_1252646	006350475	S	1348	AGTGATGATGTAAGCATAATTCAAGTGATAACAATTCGAACCACCCCCTG	9	-	109042056-109042105	9qF2	Mus musculus RIKEN cDNA E330009P21 gene (E330009P21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_249709	ILMN_249709	SYT11	NM_018804.3	NM_018804.3		229521	124378013	NM_018804.3	Syt11	NP_061274.2	ILMN_3141334	007380463	A	1430	CACTACTAAGAATGAGGTGGTAGGGAGGCTGATCTTGGGGGCACACAGTG	3	-	88551710-88551759	3qF1	Mus musculus synaptotagmin XI (Syt11), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	1500004A13Rik; 3632445O20Rik; 6530420C11Rik; 5430404N14Rik; AI851970	1500004A13Rik; 3632445O20Rik; 6530420C11Rik; 5430404N14Rik; AI851970
Mus musculus	RefSeq	ILMN_249709	ILMN_249709	SYT11	NM_018804.3	NM_018804.3		229521	124378013	NM_018804.3	Syt11	NP_061274.2	ILMN_3063644	003190653	I	104	CTAAGAGGAAAGCGCAGCTAGCAACCAGGGATCGTACTGCAGGGGCAATC	3	-	88576368-88576417	3qF1	Mus musculus synaptotagmin XI (Syt11), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	1500004A13Rik; 3632445O20Rik; 6530420C11Rik; 5430404N14Rik; AI851970	1500004A13Rik; 3632445O20Rik; 6530420C11Rik; 5430404N14Rik; AI851970
Mus musculus	Riken	ILMN_202570	ILMN_202570	3110023G01RIK	ri|3110023G01|ZX00071G24|AK014074|2040					AK014074	3110023G01Rik		ILMN_1258768	002680735	S	1847	CCAGCGTGACTGGGATGGAAGGGAGGAAGTTATCCTTGAGAGCTGGACTC										
Mus musculus	Riken	ILMN_205479	ILMN_205479	D030040J03RIK	ri|D030040J03|PX00180C18|AK050931|2109					AK050931	D030040J03Rik		ILMN_1219052	003800615	S	1866	GCAGGAGGGCTTACAGTTTCCCTGTAGATACATTTGTGAGAGATGATGTC										
Mus musculus	RefSeq	ILMN_196227	ILMN_196227	UCN	NM_021290.1	NM_021290.1		22226	12025527	NM_021290.1	Ucn	NP_067265.1	ILMN_2834808	007050541	S	477	AGTGATCGGCCCCGTATGGGGTCACGAAAGCCTTGACCCTTTCCCTTACC	5	-	31440479-31440524:31440525-31440528	5qB1	Mus musculus urocortin (Ucn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC151327; MGC151325	MGC151327; MGC151325
Mus musculus	MEEBO	ILMN_224155	ILMN_224155	NAT2	scl33760.3.437_60				31981606	NM_010874	Nat2		ILMN_2775738	002680608	S	1167	AAGTAAAAAGAATAGTGTGAAAAGCATTCCCATTAAATTCAACCAGCATT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [evidence IMP]; Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [evidence IDA]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212936	ILMN_260673	DNHD1	XM_908793.3	XM_908793.3		77505	149257641	XM_908793.3	Dnhd1	XP_913886.3	ILMN_1217520	003610132	S	3196	CCTTGGAGCATCAGTTCCTGAATATACTCAATAACTTCAATGCCCTATGC	7	+	112832567-112832616	7qE3	PREDICTED: Mus musculus dynein heavy chain domain 1 (Dnhd1), mRNA.					
Mus musculus	MEEBO	ILMN_191021	ILMN_191021	BC044804	scl39343.6_528				31342383	NM_178035	BC044804		ILMN_2475376	001340224	S	13	GGGAAGCCCTGTAGACATTTTGGGTGTTTGCGTCTGATTTGCTATCTCCT										
Mus musculus	RefSeq	ILMN_196381	ILMN_196381	8430437N05RIK	XM_147854.1	XM_147854.1			20877575	XM_147854.1	8430437N05Rik		ILMN_2523897	003990328	S	471	GGAAAGGCTTTGCCTGCTGGACTCTCACTTTAGTGATGGTTAAAAGGAAG										
Mus musculus	RefSeq	ILMN_213357	ILMN_213357	SCARB1	NM_016741.1	NM_016741.1		20778	14389422	NM_016741.1	Scarb1	NP_058021.1	ILMN_1223315	004540180	S	1613	GGAGTGGTAGTAAAAAGGGCTCCCAGGATAAGGAGGCCATTCAGGCCTAC	5	-	125761534-125761583	5qG1.1	Mus musculus scavenger receptor class B, member 1 (Scarb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [evidence IMP]; The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels during angiogenesis [goid 43534] [evidence IMP]; The multiplication or reproduction of endothelial cells, resulting in the expansion of a cell population. Endothelial cells are thin flattened cells which line the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 1935] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence IDA]	mSR-BI; Cd36l1; CD36; SR-B1; SR-BI; SRBI; AI120173; Srb1; Cla1; D5Ertd460e; Cla-1	mSR-BI; Cd36l1; CD36; SR-B1; SR-BI; SRBI; AI120173; Srb1; Cla1; D5Ertd460e; Cla-1
Mus musculus	RefSeq	ILMN_218734	ILMN_218734	MSRB2	NM_029619.2	NM_029619.2		76467	27753987	NM_029619.2	Msrb2	NP_083895.1	ILMN_2699556	000130300	S	600	GCCCTTCCTTGTGGAGCCTTGGTTCTGTAACTCGGATGGATGCCTTGCTT	2	+	19310130-19310174:19314835-19314839	2qA3	Mus musculus methionine sulfoxide reductase B2 (Msrb2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues [goid 30091] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin [goid 8113] [evidence IEA]; Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on oxidized methionine in peptide linkage with specificity for the R enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 318] [evidence IDA]	Pilb; Mrsb; Msrb; 2310050L06Rik	Pilb; Mrsb; Msrb; 2310050L06Rik
Mus musculus	RefSeq	ILMN_218734	ILMN_218734	MSRB2	NM_029619.2	NM_029619.2		76467	27753987	NM_029619.2	Msrb2	NP_083895.1	ILMN_2909211	005960341	S	965	GTGTTGAAGAGGAGGACAAAGTAGCCGAGCATGGGACACACATACCCATG	2	+	19316050-19316099	2qA3	Mus musculus methionine sulfoxide reductase B2 (Msrb2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues [goid 30091] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin [goid 8113] [evidence IEA]; Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on oxidized methionine in peptide linkage with specificity for the R enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 318] [evidence IDA]	Pilb; Mrsb; Msrb; 2310050L06Rik	Pilb; Mrsb; Msrb; 2310050L06Rik
Mus musculus	Riken	ILMN_206556	ILMN_206556	NEO1	ri|E030041A17|PX00206L19|AK087272|1867					AK087272	Neo1		ILMN_1215412	005260176	S	1745	CCCCTGAGACATACAAAGGTCAGTTGCAGACATGGTAACTCTCACTAGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IPI]		
Mus musculus	MEEBO	ILMN_191197	ILMN_191197	DDX23	scl074351.1_30				51829896	XM_128190	Ddx23		ILMN_1238175	004730041	S	2	CAGTCCTCTGACTGCCGAGGGGTAGAGCCATGTAGCTTAGCCTAAAAAGC						A complex composed of three small nuclear ribonucleoproteins, snRNP U4, snRNP U6 and snRNP U5 [goid 46540] [evidence ISO]				
Mus musculus	MEEBO	ILMN_195954	ILMN_195954	2010016I18RIK	scl069206.1_103						2010016I18Rik		ILMN_2520264	002000164	S	13	GAGCAGCCAGGTAGATCAGCTCAGCTGTTTCCTCAATCCGGACCTTGAGT										
Mus musculus	RefSeq	ILMN_218554	ILMN_218554	CTLA2A	NM_007796.1	NM_007796.1		13024	6681076	NM_007796.1	Ctla2a	NP_031822.1	ILMN_1221739	006650324	S	579	GTGTAACATTGAATTCATGTAAGATTAACACTGTGGTGTAAACTCTGAGG	13	-	61036169-61036218	13qB2	Mus musculus cytotoxic T lymphocyte-associated protein 2 alpha (Ctla2a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	Ctla-2a	Ctla-2a
Mus musculus	RefSeq	ILMN_219085	ILMN_219085	G6PC	NM_008061.3	NM_008061.3		14377	118131011	NM_008061.3	G6pc	NP_032087.2	ILMN_1245103	003370255	S	1971	GGGGCAGAAATATGACTCCTTTCCCTAGCCCAAGCCATCCAAGAGCTCTC	11	+	101238943-101238992	11qD	Mus musculus glucose-6-phosphatase, catalytic (G6pc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IMP]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IMP]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [evidence IMP]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5980] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The chemical reactions and pathways involving urate, the anion of uric acid, 2,6,8-trioxypurine, the end product of purine metabolism in certain mammals and the main excretory product in uricotelic animals [goid 46415] [evidence IMP]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [evidence IMP]; The chemical reactions and pathways involving glucose 6-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 51156] [evidence IMP]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IMP]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IDA]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence ISO]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IDA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IDA]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IMP]	Glc-6-Pase; G6Pase; G6pt; AW107337	Glc-6-Pase; G6Pase; G6pt; AW107337
Mus musculus	MEEBO	ILMN_195472	ILMN_195472	MSH3	scl43695.26.1_70				6981223	NM_010829	Msh3		ILMN_2738726	002490278	S	918	AAAAAGAAGGGGAACCTTTCCGTTGGTGTCGTGGGAGTGCAGCCCGCAAC							Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with damaged DNA [goid 3684] [evidence IGI]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223557	ILMN_228732	MXI1	NM_001008543.2	NM_001008543.2		17859	114520597	NM_001008543.2	Mxi1	NP_001008543.1	ILMN_2765741	001050553	S	2244	TTTCAGTCCTGTAGTTTTATTTTATGTTTAGATAGGGCTGGGCAAGGAAA	19	+	53447701-53447750	19qD2	Mus musculus Max interacting protein 1 (Mxi1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mad2	Mad2
Mus musculus	RefSeq	ILMN_215874	ILMN_242456	4833439L19RIK	NM_133797.2	NM_133797.2		97820	142384711	NM_133797.2	4833439L19Rik	NP_598558.1	ILMN_2724226	007650639	S	2453	CCTGTTGGTCTCGAACACTCAACATATGATTGCTCGATCACTTTAGATAG	13	-	54652708-54652757	13qB1	Mus musculus RIKEN cDNA 4833439L19 gene (4833439L19Rik), mRNA.				C81457; 4930558H15Rik	C81457; 4930558H15Rik
Mus musculus	RefSeq	ILMN_215874	ILMN_242456	4833439L19RIK	NM_133797.2	NM_133797.2		97820	142384711	NM_133797.2	4833439L19Rik	NP_598558.1	ILMN_2664670	002450110	S	1810	TGGGGATCACCACCACAGCCCAGCTCAAGTTCTTTCTCTTGGTTAGTCCA	13	-	54653351-54653400	13qB1	Mus musculus RIKEN cDNA 4833439L19 gene (4833439L19Rik), mRNA.				C81457; 4930558H15Rik	C81457; 4930558H15Rik
Mus musculus	Riken	ILMN_202638	ILMN_202638	3230402H02RIK	ri|3230402H02|PX00093A07|AK019450|2633					AK019450	3230402H02Rik		ILMN_1215329	000060435	S	2506	TGCCAGGTAATGCTGGCTCTCGGCTTTTTAATCCCAGTCGAAGAAGGCAG										
Mus musculus	RefSeq	ILMN_215891	ILMN_215891	GLTPD2	NM_146020.1	NM_146020.1		216871	22122496	NM_146020.1	Gltpd2	NP_666132.1	ILMN_2664841	004810128	S	369	GCCTGTATGAGCCCTGAAGGGGATGTGGCGTTGTCTCAGTATCTGGCAGG	11	+	70333317-70333366	11qB3	Mus musculus glycolipid transfer protein domain containing 2 (Gltpd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 46836] [evidence IEA]	Interacting selectively with a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic moiety such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate [goid 51861] [evidence IEA]; Enables the directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 17089] [evidence IEA]	RP23-122P1.9; MGC37941	RP23-122P1.9; MGC37941
Mus musculus	RefSeq	ILMN_215891	ILMN_215891	GLTPD2	NM_146020.1	NM_146020.1		216871	22122496	NM_146020.1	Gltpd2	NP_666132.1	ILMN_2874836	006480278	S	1092	TAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGAGATCCTCTCA	11	+	70334127-70334176	11qB3	Mus musculus glycolipid transfer protein domain containing 2 (Gltpd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 46836] [evidence IEA]	Interacting selectively with a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic moiety such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate [goid 51861] [evidence IEA]; Enables the directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 17089] [evidence IEA]	RP23-122P1.9; MGC37941	RP23-122P1.9; MGC37941
Mus musculus	RefSeq	ILMN_215449	ILMN_215449	ADAM1B	NM_172125.2	NM_172125.2		280667	114842411	NM_172125.2	Adam1b	NP_742123.2	ILMN_3054283	004390739	I	17	TGGGGAAAATCCCAGAGCACTGGTGTATCAGGCTGGTGGCCATGTTGCTC	5	-	121952923-121952972	5qF	Mus musculus a disintegrin and metallopeptidase domain 1b (Adam1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Adam1; Ftna	Adam1; Ftna
Mus musculus	RefSeq	ILMN_215449	ILMN_215449	ADAM1B	NM_172125.2	NM_172125.2		280667	114842411	NM_172125.2	Adam1b	NP_742123.2	ILMN_3131005	005720131	A	2197	GCTTCCGAAGCAGGGCCTTCAGAGCTAGAGGAGCTTCCAGAAGGGGAGAA	5	-	121950743-121950792	5qF	Mus musculus a disintegrin and metallopeptidase domain 1b (Adam1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Adam1; Ftna	Adam1; Ftna
Mus musculus	RefSeq	ILMN_213102	ILMN_213102	1700029F12RIK	NM_025585.2	NM_025585.2		66479	124107619	NM_025585.2	1700029F12Rik	NP_079861.1	ILMN_1218314	005820132	S	904	CTAACACATCAACAATGGGTCAGCAACAAGTTTCCAGCCCCACGCCCCAG	13	-	97791993-97792042	13qD1	Mus musculus RIKEN cDNA 1700029F12 gene (1700029F12Rik), transcript variant 2, mRNA.					
Mus musculus	RefSeq	ILMN_217123	ILMN_217123	STXBP5L	NM_172440.1	NM_172440.1		207227	27369590	NM_172440.1	Stxbp5l	NP_766028.1	ILMN_3000703	004590672	S	2904	CTGCTCAGAAAAACAAGCCAAAGTCTTCTCACTGCCTTCCCAGACCTGCC	16	-	37053525-37053574	16qB3	Mus musculus syntaxin binding protein 5-like (Stxbp5l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		LLGL4; A830015P08Rik; tomosyn-2; 9430094L02	LLGL4; A830015P08Rik; tomosyn-2; 9430094L02
Mus musculus	RefSeq	ILMN_217123	ILMN_217123	STXBP5L	NM_172440.1	NM_172440.1		207227	27369590	NM_172440.1	Stxbp5l	NP_766028.1	ILMN_3000705	003400088	S	3193	GCTCCATTGTTCAACAATATGCTTTGTGGTGGGGGTGTGAATAGGGCTGG	16	-	37053236-37053285	16qB3	Mus musculus syntaxin binding protein 5-like (Stxbp5l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		LLGL4; A830015P08Rik; tomosyn-2; 9430094L02	LLGL4; A830015P08Rik; tomosyn-2; 9430094L02
Mus musculus	MEEBO	ILMN_187935	ILMN_187935	SCL0002975.1_346	scl0002975.1_346	AK088505.1			26104834	AK088505.1	scl0002975.1_346		ILMN_2448404	001400301	S	16	GGTGCCATTGAAAACGCTGCTCTTCTAAGTCCTTTGTGGCTTGTAAGTGG										
Mus musculus	RefSeq	ILMN_191914	ILMN_248333	A930033H14RIK	XR_005131.2	XR_005131.2		320700	149261254	XR_005131.2	A930033H14Rik		ILMN_1227608	004060176	S	2615	CAATCTGCATCATTCACCTGAGATATACAAGGACTGGAGGCCTCACTGGG				10qB5.3	PREDICTED: Mus musculus RIKEN cDNA A930033H14 gene (A930033H14Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_191914	ILMN_248333	A930033H14RIK	XR_005131.2	XR_005131.2		320700	149261254	XR_005131.2	A930033H14Rik		ILMN_2725091	006250035	S	2198	CCCCGACCATCCTTGTAGAGTGGATAAGGAATGCCTACTAGCCATTTTGC				10qB5.3	PREDICTED: Mus musculus RIKEN cDNA A930033H14 gene (A930033H14Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_199645	ILMN_199645	LOC383779	XM_357241.1	XM_357241.1			38075461	XM_357241.1	LOC383779		ILMN_2535973	006560670	S	675	CTCGGAGGGAGAAGCAGGACACAAGGAAGATGTTGCCACCCAAGAGAGCG										
Mus musculus	RefSeq	ILMN_200235	ILMN_200235	LOC386027	XM_359037.1	XM_359037.1			38081025	XM_359037.1	LOC386027		ILMN_1241812	001050484	S	1125	TACACCAGATTTTTCACCAGAGACTATGAAAGCAAGAAGAGCCTGGACAG										
Mus musculus	MEEBO	ILMN_185460	ILMN_185460	MJ-4000-125_896	MJ-4000-125_896						MJ-4000-125_896		ILMN_2427208	001940440	S	2	TCCAGAGCCAGTTCCAGCTTCAACTACTGTCTCTCCCTCTCTAATTCCAG										
Mus musculus	RefSeq	ILMN_220536	ILMN_220536	MTRR	NM_172480.1	NM_172480.1		210009	27369649	NM_172480.1	Mtrr	NP_766068.1	ILMN_2969314	000540706	S	3412	GCATGGAACAGGTCTGCCTATGTGTAGTGTGGGTGTCCACTTCAGCCTAG	13	-	69028381-69028430	13qB3	Mus musculus 5-methyltetrahydrofolate-homocysteine methyltransferase reductase (Mtrr), mRNA.		Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISO]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence ISO]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence ISO]; Catalysis of the reaction: [methionine synthase]-cob(II)alamin + NADPH + H+ + S-adenosyl methionine = [methionine synthase]-methylcob(I)alamin + S-adenosylhomocysteine + NADP+ [goid 30586] [evidence ISO]; Catalysis of the reaction: 2 cob(II)alamin + NAD+ = 2 aquacob(III)alamin + NADH + H+ [goid 47138] [evidence ISO]	4732420G08	4732420G08
Mus musculus	RefSeq	ILMN_220536	ILMN_220536	MTRR	NM_172480.1	NM_172480.1		210009	27369649	NM_172480.1	Mtrr	NP_766068.1	ILMN_2969317	006840768	S	3517	CCCTGCAAACCTAACTGTAACATAGCCTTCACAAGCATGATAAACCCTCC	13	-	69028276-69028325	13qB3	Mus musculus 5-methyltetrahydrofolate-homocysteine methyltransferase reductase (Mtrr), mRNA.		Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISO]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence ISO]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence ISO]; Catalysis of the reaction: [methionine synthase]-cob(II)alamin + NADPH + H+ + S-adenosyl methionine = [methionine synthase]-methylcob(I)alamin + S-adenosylhomocysteine + NADP+ [goid 30586] [evidence ISO]; Catalysis of the reaction: 2 cob(II)alamin + NAD+ = 2 aquacob(III)alamin + NADH + H+ [goid 47138] [evidence ISO]	4732420G08	4732420G08
Mus musculus	RefSeq	ILMN_196537	ILMN_196537	2810470D21RIK	XM_125812.4	XM_125812.4			38090640	XM_125812.4	2810470D21Rik		ILMN_2524723	002070050	S	82	CACGTGCTCATCCACACGCAAGAACGCCAGATCAAGTGTCCGAAGTGTGA										
Mus musculus	RefSeq	ILMN_214758	ILMN_214758	RHD	NM_011270.2	NM_011270.2		19746	31982765	NM_011270.2	Rhd	NP_035400.2	ILMN_2651609	000670736	S	1366	CCGAGTGGTCATCTTAGTTTAAATAGTATGTTTGGTTTCATGACAGAGAC	4	+	134451987-134452036	4qD3	Mus musculus Rh blood group, D antigen (Rhd), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]			Rhl1; Rhced; Rh	Rhl1; Rhced; Rh
Mus musculus	RefSeq	ILMN_261712	ILMN_261712	KRT80	NM_028770.2	NM_028770.2		74127	124249089	NM_028770.2	Krt80	NP_083046.2	ILMN_2865335	007380136	S	1042	AGGAGAACATCAAGGTGGCTGAGGAGCAAGGAGAACTGGCCTTCCAGGAC	15	-	101181584-101181633	15qF2	Mus musculus keratin 80 (Krt80), mRNA. XM_283319 XM_895080 XM_902578 XM_902582 XM_916627 XM_924348 XM_924355 XM_924358	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2310041I20Rik; Kb20; 1200016G03Rik	2310041I20Rik; Kb20; 1200016G03Rik
Mus musculus	RefSeq	ILMN_220076	ILMN_254119	DUSP18	NM_173745.4	NM_173745.4		75219	51093846	NM_173745.4	Dusp18	NP_776106.1	ILMN_1247614	004050128	S	2255	GGTAGGCAGGAGAGGATGAAGCTAACTGCTGTTCTAGACTAATGTCATCC	11	+	3798963-3799012	11qA1	Mus musculus dual specificity phosphatase 18 (Dusp18), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	DUSP20; BB028064; LMWDSP20; AI430870; 4930527G07Rik	DUSP20; BB028064; LMWDSP20; AI430870; 4930527G07Rik
Mus musculus	RefSeq	ILMN_197931	ILMN_328315	LOC100046874	XM_001476963.1	XM_001476963.1		100046874	149267801	XM_001476963.1	LOC100046874	XP_001477013.1	ILMN_2529874	004180605	S	238	AAAAGGTGCGGAATCAATCCTCCCAGACGCACCATGGCTGTTTTTGCTGT					PREDICTED: Mus musculus similar to SRSR846 (LOC100046874), mRNA.					
Mus musculus	RefSeq	ILMN_199325	ILMN_199325	LOC235921	XM_142493.3	XM_142493.3			38095513	XM_142493.3	LOC235921		ILMN_1216058	007550551	S	306	GATTGTGAGAAGCAGAGATGTGGCCGCAAAGTCGCCTTCCTGTGCTTCAA										
Mus musculus	RefSeq	ILMN_201965	ILMN_215527	CLK3	NM_007713.4	NM_007713.4		102414	141801904	NM_007713.4	Clk3	NP_031739.3	ILMN_1224891	007400291	S	1386	AGACGAGCAGCTTCCCGATACTTGCCCACATTACGGATGATCTTCAGGGC	9	-	57603060-57603109	9qB	Mus musculus CDC-like kinase 3 (Clk3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC103028; MGC36552; AI256811	MGC103028; MGC36552; AI256811
Mus musculus	Riken	ILMN_201894	ILMN_201894	4933409F16RIK	ri|4933409F16|PX00020A18|AK016752|1126					AK016752	4933409F16Rik		ILMN_1249309	005360546	S	970	TTTCCCAGCTCTTGCTAGGGGAACCGTGTAACTTCTACGGCCCACAGCCA										
Mus musculus	MEEBO	ILMN_221392	ILMN_221392	5830458K16RIK	scl49298.8_323				32129268	NM_023386	5830458K16Rik		ILMN_2776508	004220273	S	1440	AACCAACAATGAGTATTATTGTAAATTTACTGTGGCAGACTGGGTGATGC										
Mus musculus	RefSeq	ILMN_217568	ILMN_320931	5730488B01RIK	XM_001473976.1	XM_001473976.1		70602	149252350	XM_001473976.1	5730488B01Rik	XP_001474026.1	ILMN_2684899	004540037	S	2058	GACTGGGAGCAACCGAGACAGGGTCGAAGAAGAGTAAGGATGGGAGAGAG	4	+	44717729-44717778	4qB1	PREDICTED: Mus musculus RIKEN cDNA 5730488B01 gene (5730488B01Rik), mRNA.					
Mus musculus	Riken	ILMN_203887	ILMN_203887	LEF1	ri|A630062L10|PX00147I19|AK042137|2067					AK042137	Lef1		ILMN_1233230	007040050	S	1926	ACAGTGTGTACTGAATGGTGGTTTACGCCACAGGGAGACCGGATGCGTCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]	The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 48341] [evidence IGI]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IGI]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IGI]; The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus [goid 21542] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]	The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IGI]		
Mus musculus	RefSeq	ILMN_220758	ILMN_327101	LOC100046923	XM_001477068.1	XM_001477068.1		100046923	149258836	XM_001477068.1	LOC100046923	XP_001477118.1	ILMN_2726428	001110041	S	590	TGACCGCCTACAGTCGTGACTCTCAGAGGACTAGAGATATGGTGGGGGTG					PREDICTED: Mus musculus similar to mucin 2 precursor (LOC100046923), mRNA.					
Mus musculus	Riken	ILMN_202736	ILMN_202736	ITGAV	ri|9630009E01|PX00115K17|AK020674|1102					AK020674	Itgav		ILMN_1251946	004540025	S	696	CAGCTGAGGGGGGCCGGTTTATGTGGAGCACAGGAAGTCTTGTATGTTCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte [goid 43277] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217936	ILMN_217936	OLFR952	NM_146503.1	NM_146503.1		235248	27544958	NM_146503.1	Olfr952	NP_666714.1	ILMN_1217594	002690441	S	681	CATTAAATCCTCTGGGGGCAGAGTCAAGGCCTTTAGCACCTACAGCTCCC	9	-	39233924-39233973	9qA5.1	Mus musculus olfactory receptor 952 (Olfr952), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-21	MOR171-21
Mus musculus	RefSeq	ILMN_192171	ILMN_192171	TPH1	NM_009414.2	NM_009414.2		21990	49274628	NM_009414.2	Tph1	NP_033440.1	ILMN_2485639	000130066	S	1710	AGTTGCGGTATGACCTTGATGTCATCAGTGATGCCCTCGCTAGGGTCACC	7	-	53902813-53902862	7qB4	Mus musculus tryptophan hydroxylase 1 (Tph1), mRNA.		The chemical reactions and pathways resulting in the formation from tryptophan of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 6587] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42427] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with an amino acid, organic acids containing one or more amino substituents [goid 16597] [evidence IEA]; Catalysis of the reaction: L-tryptophan + tetrahydrobiopterin + O2 = 5-hydroxy-L-tryptophan + 4-alpha-hydroxytetrahydrobiopterin + H2O [goid 4510] [evidence IDA]	Tph	Tph
Mus musculus	RefSeq	ILMN_212554	ILMN_212554	PDCL3	NM_026850.2	NM_026850.2		68833	31560119	NM_026850.2	Pdcl3	NP_081126.2	ILMN_2964511	004260324	S	1443	GCCAGGGCTGCGTTACCAAGACCCTGTCTCCAAACCAAGCAGCTCTTCTT	1	+	38941519-38941568	1qB	Mus musculus phosducin-like 3 (Pdcl3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	1110061A19Rik; Viaf1; C80025	1110061A19Rik; Viaf1; C80025
Mus musculus	MEEBO	ILMN_208775	ILMN_208775	D830016O14RIK	scl52892.1.1_103	NM_176907.2			31342363	NM_176907.2	D830016O14Rik		ILMN_2589390	007040066	S	1919	GGTGTCTTTAACAAATCCCTCCAAAGTGAGCTTAATTTGACAAACATGGA										
Mus musculus	RefSeq	ILMN_198251	ILMN_230444	DPCR1	NM_001033366.2	NM_001033366.2		268949	142356233	NM_001033366.2	Dpcr1	NP_001028538.1	ILMN_1259994	000580228	S	1429	CCCGAGCCCCAGCCTGAAGACAAAGGGAGCCGCAATTCCTACCCAGTTTA	17	-	35773829-35773878	17qB1	Mus musculus diffuse panbronchiolitis critical region 1 (human) (Dpcr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm630	Gm630
Mus musculus	RefSeq	ILMN_210636	ILMN_210636	GUCY1B2	NM_172810.2	NM_172810.2		239134	142369173	NM_172810.2	Gucy1b2	NP_766398.1	ILMN_1227116	007510136	S	2455	GGCAGGGCGAGACGACACAGATGCAGTCAATAGCCAGTCATCACCAGATG	14	-	63011719-63011768	14qD1	Mus musculus guanylate cyclase 1, soluble, beta 2 (Gucy1b2), mRNA.			Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA]	B930025B03; GC-SB2	B930025B03; GC-SB2
Mus musculus	RefSeq	ILMN_210381	ILMN_210381	C230096C10RIK	NM_146157.3	NM_146157.3		230866	85861264	NM_146157.3	C230096C10Rik	NP_666269.2	ILMN_2747721	003780068	S	3357	ACTGTTTAAATTGACCTTAGTTAACCTTCTGTATTTCCAGTCTTACTAGA	4	+	138931776-138931825	4qD3	Mus musculus RIKEN cDNA C230096C10 gene (C230096C10Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA0090; RP23-371E13.1; 2700016F22Rik	mKIAA0090; RP23-371E13.1; 2700016F22Rik
Mus musculus	RefSeq	ILMN_210381	ILMN_210381	C230096C10RIK	NM_146157.3	NM_146157.3		230866	85861264	NM_146157.3	C230096C10Rik	NP_666269.2	ILMN_3158659	004860133	A	5889	CTTACCGGCCAGAAAAAGTGGCTAATGGTCGGGAAGTGACCTACCTTTTC	4	+	138934308-138934357	4qD3	Mus musculus RIKEN cDNA C230096C10 gene (C230096C10Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA0090; RP23-371E13.1; 2700016F22Rik	mKIAA0090; RP23-371E13.1; 2700016F22Rik
Mus musculus	RefSeq	ILMN_210381	ILMN_210381	C230096C10RIK	NM_146157.3	NM_146157.3		230866	85861264	NM_146157.3	C230096C10Rik	NP_666269.2	ILMN_1249433	005570187	S	5872	GCAAGACTGTTTTTTCACTTACCGGCCAGAAAAAGTGGCTAATGGTCGGG	4	+	138934291-138934340	4qD3	Mus musculus RIKEN cDNA C230096C10 gene (C230096C10Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA0090; RP23-371E13.1; 2700016F22Rik	mKIAA0090; RP23-371E13.1; 2700016F22Rik
Mus musculus	RefSeq	ILMN_233161	ILMN_233161	VKORC1L1	NM_001001327.1	NM_001001327.1		69568	47717108	NM_001001327.1	Vkorc1l1	NP_001001327.1	ILMN_3163029	000520050	A	475	GACTGATGGCCAGCGGATCTCCACCCAACCGTCTCAAACACTTCTTTCAT	5	+	130458232-130458281	5qG1.3	Mus musculus vitamin K epoxide reductase complex, subunit 1-like 1 (Vkorc1l1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals. Vitamin K substances share a methylated naphthoquinone ring structure and vary in the aliphatic side chains attached to the molecule [goid 42373] [evidence ISO]		2310024K08Rik	2310024K08Rik
Mus musculus	RefSeq	ILMN_258899	ILMN_258899	DOXL2	NM_001029987.1	NM_001029987.1		243376	71725388	NM_001029987.1	Doxl2	NP_001025158.1	ILMN_2987657	003840601	S	2219	AGTCCAGCCCCAGCTCCTGCTCAACAGACCCATACCCCCACAAGGACATT	6	+	48928675-48928724	6qB2.3	Mus musculus diamine oxidase-like protein 2 (Doxl2), mRNA.					
Mus musculus	RefSeq	ILMN_198353	ILMN_258899	DOXL2	NM_001029987.1	NM_001029987.1		243376	71725388	NM_001029987.1	Doxl2	NP_001025158.1	ILMN_1222506	002680072	S	2132	ATATATCTGACACTGGATCCCTGGGGGCAGGGTCTGCCTGATGCCTCCAC	6	+	48928588-48928628:48928629-48928637	6qB2.3	Mus musculus diamine oxidase-like protein 2 (Doxl2), mRNA.					
Mus musculus	RefSeq	ILMN_221719	ILMN_328858	LOC100045477	XM_001474374.1	XM_001474374.1		100045477	149240650	XM_001474374.1	LOC100045477	XP_001474424.1	ILMN_2739452	000520180	S	744	ATACTTCCTTCTGGAAACAGAAGTTGTTATATGAGACAGCCTTGGCCCAG					PREDICTED: Mus musculus hypothetical protein LOC100045477 (LOC100045477), mRNA.					
Mus musculus	RefSeq	ILMN_197760	ILMN_197760	LOC268828	XM_196132.1	XM_196132.1			25033005	XM_196132.1	LOC268828		ILMN_1232244	005700114	S	124	ACTATACAGGGACAAGGCTGCTCATCCGGCCCTAGCAAACCAGAGGCTGC										
Mus musculus	MEEBO	ILMN_193459	ILMN_193459	9130004J05RIK	scl47138.1.1_7						9130004J05Rik		ILMN_2497395	005290451	S	17	GTATTGTCACGTTGGCACTCTCACGTGAATGTTTCCTTAGACAAGTCACC										
Mus musculus	RefSeq	ILMN_221538	ILMN_221538	PCDHGA4	NM_033587.3	NM_033587.3		93712	148747498	NM_033587.3	Pcdhga4	NP_291065.3	ILMN_2736902	004880204	S	2187	TGGGTTGTCATCCTTGCCTGCCTCACATTTTGTGGGTGTGGATGGTGTAC				18qB3	Mus musculus protocadherin gamma subfamily A, 4 (Pcdhga4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190413	ILMN_211397	WDR92	NM_178909.4	NM_178909.4		103784	114145529	NM_178909.4	Wdr92	NP_849240.1	ILMN_1225370	004490008	S	2891	TATAAGCCTGTGAAAAATTTTGGCTGACCGTCGATTCTCCTCTACACCAC	11	+	17134663-17134712	11qA2	Mus musculus WD repeat domain 92 (Wdr92), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		HZGJ; AI553587; RP23-32H19.3	HZGJ; AI553587; RP23-32H19.3
Mus musculus	RefSeq	ILMN_251740	ILMN_251740	1700061G19RIK	NM_030141.1	NM_030141.1		78625	117935033	NM_030141.1	1700061G19Rik	NP_084417.1	ILMN_2936769	003930025	S	361	CCAGCTACTGGACATCTAAGCGAGAAGGCCAGGTGCAGCTGCGCATGGGC	17	+	57016789-57016838	17qD	Mus musculus RIKEN cDNA 1700061G19 gene (1700061G19Rik), mRNA.				1700026H02; AI507598	1700026H02; AI507598
Mus musculus	RefSeq	ILMN_259309	ILMN_259309	TGFBI	NM_009369.1	NM_009369.1		21810	6678320	NM_009369.1	Tgfbi	NP_033395.1	ILMN_2834379	000450133	S	2462	GGAAAGCCTTGGCATGGTTCTGTAAAGCTCTTGTACCGCTGGAGAAACGG	13	+	56648745-56648794	13qB1	Mus musculus transforming growth factor, beta induced (Tgfbi), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	68kDa; MGC150270; Beta-ig; big-h3; AI181842; AI747162	68kDa; MGC150270; Beta-ig; big-h3; AI181842; AI747162
Mus musculus	RefSeq	ILMN_212116	ILMN_212116	GRIP1	NM_133442.1	NM_133442.1		74053	41281632	NM_133442.1	Grip1	NP_597699.1	ILMN_2622936	006860220	S	22	GCCCCGGAGCAAGCTCAGGGAGCAGACACCATGCCGGGCTGGAAGAAGAA	10	+	118891391-118891420:118891421-118891440	10qD2	Mus musculus glutamate receptor interacting protein 1 (Grip1), transcript variant 3, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4931400F03Rik; eb; KIAA4223; mKIAA4223	4931400F03Rik; eb; KIAA4223; mKIAA4223
Mus musculus	Riken	ILMN_203632	ILMN_203632	E430038L21RIK	ri|E430038L21|PX00101A04|AK089077|3404					AK089077	E430038L21Rik		ILMN_1248231	002570059	S	3278	AGGCTTCAGTGCTTTCCCCACCAAAGTGACAGGAAAAAGAACTGGTCTGG										
Mus musculus	RefSeq	ILMN_200158	ILMN_200158	LOC385827	XM_358961.1	XM_358961.1			38080732	XM_358961.1	LOC385827		ILMN_1232389	001850753	S	223	GAGATGGCTGGATGGGGGCTTCTTCTCTGGGTACCAGAGGCTAGAAAGCT										
Mus musculus	RefSeq	ILMN_209949	ILMN_209949	PTPN21	NM_011877.1	NM_011877.1		24000	6755239	NM_011877.1	Ptpn21	NP_036007.1	ILMN_1222733	006840689	S	5366	CTGTCCTGCCATCATTCTGATTTGACTGTTTGTGGTGAGCATCGCCCTCC	12	-	99915181-99915230	12qE	Mus musculus protein tyrosine phosphatase, non-receptor type 21 (Ptpn21), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC107492; PTPD1; PTPRL10	MGC107492; PTPD1; PTPRL10
Mus musculus	RefSeq	ILMN_184866	ILMN_252701	TTN	NM_011652.3	NM_011652.3		22138	77812696	NM_011652.3	Ttn	NP_035782.3	ILMN_1233441	003180390	S	93336	ATGATGCCACGGTGTACCAAGTCAGAGCCACCAACCAAGGGGGCTCCGTG	2	-	76552413-76552462	2qC3	Mus musculus titin (Ttn), transcript variant N2-A, mRNA. XM_619765 XM_619766	A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik
Mus musculus	RefSeq	ILMN_202528	ILMN_252701	TTN	NM_011652.3	NM_011652.3		22138	77812696	NM_011652.3	Ttn	NP_035782.3	ILMN_1219166	002710743	S	60731	GCTTCCGCTGTCCAGAAAACCACCTTTAGAGTAACCAGACTTCACGAGGG	2	-	76593647-76593696	2qC3	Mus musculus titin (Ttn), transcript variant N2-A, mRNA. XM_619765 XM_619766	A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik
Mus musculus	RefSeq	ILMN_184866	ILMN_252701	TTN	NM_011652.3	NM_011652.3		22138	77812696	NM_011652.3	Ttn	NP_035782.3	ILMN_2443220	006560470	S	5621	GTCAAAGATGAGAAAAGCCTAGTGGAAGAATCTCAACTGCCTGATGGGAA	2	-	76783444-76783493	2qC3	Mus musculus titin (Ttn), transcript variant N2-A, mRNA. XM_619765 XM_619766	A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik
Mus musculus	RefSeq	ILMN_206247	ILMN_252701	TTN	NM_011652.3	NM_011652.3		22138	77812696	NM_011652.3	Ttn	NP_035782.3	ILMN_1231542	006860593	S	48436	GCACCTGTCGTGGAAACCTCCAAAGAATGATGGTGGCTCTCCTGTCACCC	2	-	76616134-76616183	2qC3	Mus musculus titin (Ttn), transcript variant N2-A, mRNA. XM_619765 XM_619766	A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik
Mus musculus	RefSeq	ILMN_203671	ILMN_252701	TTN	NM_011652.3	NM_011652.3		22138	77812696	NM_011652.3	Ttn	NP_035782.3	ILMN_1226700	002690019	S	73915	GCTTGTGCAGTGGCATGAGCCAGTTAATGATGGAGGCAGCAAAGTGACTG	2	-	76579625-76579674	2qC3	Mus musculus titin (Ttn), transcript variant N2-A, mRNA. XM_619765 XM_619766	A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik
Mus musculus	RefSeq	ILMN_203734	ILMN_252701	TTN	NM_011652.3	NM_011652.3		22138	77812696	NM_011652.3	Ttn	NP_035782.3	ILMN_1223811	004260681	S	96961	GGAGCTACTGCGGCCAGTGACAACCACCCAGCGTCTCTCAGAATACAAGA	2	-	76548672-76548721	2qC3	Mus musculus titin (Ttn), transcript variant N2-A, mRNA. XM_619765 XM_619766	A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik
Mus musculus	RefSeq	ILMN_193676	ILMN_252701	TTN	NM_011652.3	NM_011652.3		22138	77812696	NM_011652.3	Ttn	NP_035782.3	ILMN_2499436	004060349	S	29696	CCAAAGAAAGTTGTTGAAGAAAAAATACAGATTTCAATTACCAAACGTGA	2	-	76688083-76688132	2qC3	Mus musculus titin (Ttn), transcript variant N2-A, mRNA. XM_619765 XM_619766	A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik
Mus musculus	RefSeq	ILMN_200058	ILMN_310076	LOC629364	XM_001479142.1	XM_001479142.1		629364	149262815	XM_001479142.1	LOC629364	XP_001479192.1	ILMN_1242946	000290010	S	537	GTTGCTGGTACAAAGACCAAAACAACCAAATGGCACCGCTGCCCTGTGGG	12	-	25177972-25178021	12qA1.3	PREDICTED: Mus musculus similar to actin related protein 2/3 complex, subunit 5 (LOC629364), mRNA.					
Mus musculus	RefSeq	ILMN_200643	ILMN_210919	MYO5B	NM_201600.2	NM_201600.2		17919	95113659	NM_201600.2	Myo5b	NP_963894.1	ILMN_2539489	002120754	S	5555	CTCTGACCATGGACTCGATCCACATCCCGGCCTGTCTCAACCTGGAGTTT	18	+	74930039-74930088	18qE2	Mus musculus myosin Vb (Myo5b), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	mKIAA1119; AI661750	mKIAA1119; AI661750
Mus musculus	RefSeq	ILMN_210919	ILMN_210919	MYO5B	NM_201600.2	NM_201600.2		17919	95113659	NM_201600.2	Myo5b	NP_963894.1	ILMN_2610576	006380639	S	5883	CCAGTTCTACAGAGTGGAAGTGCCTAGCTTTGATCTTTGTATATATCTTG	18	+	74930367-74930416	18qE2	Mus musculus myosin Vb (Myo5b), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	mKIAA1119; AI661750	mKIAA1119; AI661750
Mus musculus	RefSeq	ILMN_196812	ILMN_196812	LOC228868	XM_149244.1	XM_149244.1			20861690	XM_149244.1	LOC228868		ILMN_2525893	004150072	S	255	CAACCTACCCCAGGGAAGTAGAGAGCATGAAGAAGCAGAAAATAATGAGG										
Mus musculus	MEEBO	ILMN_219977	ILMN_219977	A530013C23RIK	scl19881.5.1_25	NM_177851.2			31342845	NM_177851.2	A530013C23Rik		ILMN_2715978	003840091	S	3122	GGGAGAGTCACTAGGGAGACGCCTCATGCATCTGGTGGAACCTGAATTCT										
Mus musculus	RefSeq	ILMN_186051	ILMN_233192	EPB4.1	NM_183428.2	NM_183428.2		269587	38570128	NM_183428.2	Epb4.1	NP_906273.2	ILMN_2720813	007210040	S	5567	GGAGAGAAATGGGCTTGGGTTCCATTCTCAGAAGTGAATTGCAGACTGGA	4	-	131480292-131480341	4qD2.3	Mus musculus erythrocyte protein band 4.1 (Epb4.1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISS]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISS]; Interacting selectively with spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers [goid 30507] [evidence ISS]	4.1R; mKIAA4056; AI415518; Elp1; KIAA4056; D4Ertd442e; Elp-1	4.1R; mKIAA4056; AI415518; Elp1; KIAA4056; D4Ertd442e; Elp-1
Mus musculus	MEEBO	ILMN_210541	ILMN_210541	2210403N09RIK	scl26154.16_189	XM_132372.2			38081874	XM_132372.2	2210403N09Rik		ILMN_2606641	006100670	S	2767	GGGCTGAGCGGAAAGAATGTACTTATAGATATGTACATACCACAGTGCTG										
Mus musculus	RefSeq	ILMN_221085	ILMN_221085	KIF12	NM_010616.1	NM_010616.1		16552	33563261	NM_010616.1	Kif12	NP_034746.1	ILMN_2730865	006370192	S	1983	TGCACCTCAGCCAGAGACAACCACAGCCTAGCGAGGACACACAGAGCCCT	4	-	62652215-62652264	4qB3	Mus musculus kinesin family member 12 (Kif12), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215747	ILMN_215747	PMS1	NM_153556.1	NM_153556.1		227099	23956335	NM_153556.1	Pms1	NP_705784.1	ILMN_1250517	006980367	S	2763	CCAAGAGAGGATGTCCAAGATCTTATCTATAGAATGAAGCACCAGTTCGG	1	-	53246250-53246299	1qC1.1	Mus musculus postmeiotic segregation increased 1 (S. cerevisiae) (Pms1), mRNA.		A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]		MGC36491	MGC36491
Mus musculus	RefSeq	ILMN_198127	ILMN_328257	NPW	NM_001099664.1	NM_001099664.1		381073	153281204	NM_001099664.1	Npw	NP_001093134.1	ILMN_1258556	002030066	S	365	AGGGAGTCCGCCAACCGGAGCAGTCGCTAAGCCTTCACTCCTGGATCTCA				17qA3.3	Mus musculus neuropeptide W (Npw), mRNA.		The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]		Gm935	Gm935
Mus musculus	RefSeq	ILMN_214201	ILMN_226044	SAT2	NM_026991.2	NM_026991.2		69215	142362782	NM_026991.2	Sat2	NP_081267.1	ILMN_2645473	006200753	S	609	TCGGAAGGCTGGCTCTCCTTTCGATTTGAAGGCGAGGCAATGAGGGAGTT	11	+	69437098-69437147	11qB3	Mus musculus spermidine/spermine N1-acetyl transferase 2 (Sat2), mRNA. XM_181304 XM_901865 XM_901869 XM_901870		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving spermidine, N-(3-aminopropyl)-1,4-diaminobutane [goid 8216] [evidence ISA]; The chemical reactions and pathways involving spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses, which is involved in nucleic acid packaging. Synthesis is regulated by ornithine decarboxylase which plays a key role in control of DNA replication [goid 8215] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + an alkane-alpha,omega-diamine = CoA + an N-acetyldiamine [goid 4145] [evidence ISA]	MGC74376; SSAT2; 2610016A03Rik; SSAT-2	MGC74376; SSAT2; 2610016A03Rik; SSAT-2
Mus musculus	RefSeq	ILMN_200391	ILMN_200391	LOC386402	XM_359208.1	XM_359208.1			38081538	XM_359208.1	LOC386402		ILMN_1238901	003170598	S	10	CGTGGCTACAGAAACCTAATTATTGACACAGAATCCCTGATGGACCGAGG										
Mus musculus	RefSeq	ILMN_215973	ILMN_215973	OC90	NM_010953.1	NM_010953.1		18256	45545406	NM_010953.1	Oc90	NP_035083.1	ILMN_1217077	001820767	S	1423	GCTCCACCGCAGATGGAACGCCTAAGAAGATTTCTGGAAAAGCCTCCTGG	15	-	65707893-65707942	15qD1	Mus musculus otoconin 90 (Oc90), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence TAS]	Pla2ll; Ocn-95; PLA2L	Pla2ll; Ocn-95; PLA2L
Mus musculus	RefSeq	ILMN_211256	ILMN_211256	AV249152	NM_145425.2	NM_145425.2		216560	31981771	NM_145425.2	AV249152	NP_663400.2	ILMN_2970672	000670537	S	2003	CCTGAAGGAGAAAACAAGTTTCCAGGCCTTCTTCCTTCCATTGGTTCAAC	11	+	21757516-21757565	11qA3.1	Mus musculus expressed sequence AV249152 (AV249152), mRNA.				RP23-202E24.1	RP23-202E24.1
Mus musculus	RefSeq	ILMN_211256	ILMN_211256	AV249152	NM_145425.2	NM_145425.2		216560	31981771	NM_145425.2	AV249152	NP_663400.2	ILMN_2673790	000540722	S	1859	TGGGTGAACTGGCACTGGCTGAAGTGGCAAGAAGAAGGGCGCATGATATT	11	+	21713388-21713437	11qA3.1	Mus musculus expressed sequence AV249152 (AV249152), mRNA.				RP23-202E24.1	RP23-202E24.1
Mus musculus	RefSeq	ILMN_223040	ILMN_223040	ABCB11	NM_021022.3	NM_021022.3		27413	120432046	NM_021022.3	Abcb11	NP_066302.2	ILMN_2758509	006330731	S	4140	GGAGGGCTGCGGGTTGTCATAGCTCTACAGAGAATTATTAATGCTTTACA	2	-	69077044-69077093	2qC2	Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 11 (Abcb11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates [goid 46581] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	SPGP; Bsep; ABC16; PFIC2; Lith1; PGY4	SPGP; Bsep; ABC16; PFIC2; Lith1; PGY4
Mus musculus	RefSeq	ILMN_215557	ILMN_215557	PPA1	NM_026438.2	NM_026438.2		67895	27754064	NM_026438.2	Ppa1	NP_080714.2	ILMN_3005441	002000669	S	1196	GCCGTGGGGACATGGAAGTCATTTGTGCATGGATGTGCAGTGTGGACACC	10	+	61069426-61069475	10qB4	Mus musculus pyrophosphatase (inorganic) 1 (Ppa1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]; Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments [goid 16462] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2010317E03Rik; Pyp	2010317E03Rik; Pyp
Mus musculus	Riken	ILMN_206115	ILMN_206115	FCGR2B	ri|B430117C13|PX00071K12|AK080885|2197					AK080885	Fcgr2b		ILMN_2577664	003830632	S	2010	CACACACGGGGACCAAATTGCTGTGGTCCAAACCTCAACTCACAGCTTAC						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IDA]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50777] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]; Any process that stops, prevents, or reduces the rate of type I hypersensitivity, a type of inflammatory response [goid 1811] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus [goid 2862] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5057] [evidence TAS]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IDA]		
Mus musculus	MEEBO	ILMN_222765	ILMN_222765	KELCHL	scl49371.8_144	XM_148134.1			20891928	XM_148134.1	Kelchl		ILMN_1227677	006220706	S	2181	CAAAGAAAAGTGCTGGGGGGAAGGCTGCTATCATCAGAGGGAATGACCCA										
Mus musculus	Riken	ILMN_205649	ILMN_205649	A330072B11RIK	ri|A330072B11|PX00132A20|AK039609|3737					AK039609	A330072B11Rik		ILMN_2574191	007380196	S	3687	GGGCTGGCCCCTCCCACATCAATCACTAATTAAGAAAACACCCACGAGGG										
Mus musculus	RefSeq	ILMN_221720	ILMN_221720	CLEC4A2	NM_011999.3	NM_011999.3		26888	142350032	NM_011999.3	Clec4a2	NP_036129.1	ILMN_2739466	004850044	S	1815	TAAATGATGTTTGAGAACAAGACTGGTTTATAGTTTAGACTTAGATAAAT	6	+	123093427-123093476	6qF2	Mus musculus C-type lectin domain family 4, member a2 (Clec4a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence TAS]	Dcir1; DCIR; Clecsf6	Dcir1; DCIR; Clecsf6
Mus musculus	MEEBO	ILMN_191816	ILMN_191816	9030411M15RIK	scl0071531.1_47						9030411M15Rik		ILMN_2482456	003830458	S	20	GGCCCGGCAACAAAAGTACAAAAAGGGTAAGGAGAGGATGCTGAGCTTGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_187353	ILMN_187353	V1RE11	NM_134230.2	NM_134230.2		171264	61098144	NM_134230.2	V1re11	NP_598991.2	ILMN_2443381	004390561	S	1128	CTCTGTTAGGCCAAGACTAAGTTTGGTCTGGATGAGAAATATCAACCCTT	7	-	10859523-10859572	7qA1	Mus musculus vomeronasal 1 receptor, E11 (V1re11), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	MGC130229; S67; V1re3; MGC130230	MGC130229; S67; V1re3; MGC130230
Mus musculus	RefSeq	ILMN_223471	ILMN_223471	ALDH3A1	NM_007436.1	NM_007436.1		11670	6680675	NM_007436.1	Aldh3a1	NP_031462.1	ILMN_1253178	005050382	S	1549	ACCTGACACTTGTTTTGCTGGCTGTCCTGTCCTTGAAGAATTGCTCACGG	11	+	61031743-61031792	11qB2	Mus musculus aldehyde dehydrogenase family 3, subfamily A1 (Aldh3a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [evidence IDA]; Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [evidence IMP]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]	Ahd-4; Aldh3; Ahd4; Aldh	Ahd-4; Aldh3; Ahd4; Aldh
Mus musculus	RefSeq	ILMN_215849	ILMN_215849	RAD51	NM_011234.4	NM_011234.4		19361	146134472	NM_011234.4	Rad51	NP_035364.1	ILMN_1256883	000110520	S	686	AAGGCCATGTACATTGACACCGAGGGCACCTTTAGGCCGGAGCGGCTGCT				2qE5	Mus musculus RAD51 homolog (S. cerevisiae) (Rad51), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]	The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence ISO]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IDA]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rad51a; Reca; AV304093	Rad51a; Reca; AV304093
Mus musculus	RefSeq	ILMN_215849	ILMN_215849	RAD51	NM_011234.4	NM_011234.4		19361	146134472	NM_011234.4	Rad51	NP_035364.1	ILMN_1237672	007160056	S	1610	CTCTGTAAGACAGATGCAAACTTAGTTATATGCCTGAACTGTCACATCAT				2qE5	Mus musculus RAD51 homolog (S. cerevisiae) (Rad51), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]	The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence ISO]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IDA]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rad51a; Reca; AV304093	Rad51a; Reca; AV304093
Mus musculus	Riken	ILMN_203912	ILMN_203912	9830134K01RIK	ri|9830134K01|PX00118A21|AK036567|2984					AK036567	9830134K01Rik		ILMN_1219333	004890097	S	2842	GCCGCCCTTGCTGGTGTTTGTGTGGCATTTAATAAGCGTGTGCAGTGAAG										
Mus musculus	MEEBO	ILMN_191189	ILMN_191189	8430415N23RIK	scl17395.1.1137_0						8430415N23Rik		ILMN_1237987	005310435	S	20	TTAACAGTTGATGAGGGTGATTGCCAAAAGCTAGGTGTTTAGCTGCTCTG										
Mus musculus	MEEBO	ILMN_188930	ILMN_188930	A730024F05RIK	scl51700.17_160				38142471	NM_198295	A730024F05Rik		ILMN_2624977	002000402	S	630	GCGAGCGACATGGTCCAGTTCATTAATAGCATTTTGGATGGTACAGTACC										
Mus musculus	RefSeq	ILMN_209753	ILMN_209753	POLDIP3	NM_178627.3	NM_178627.3		73826	146198555	NM_178627.3	Poldip3	NP_848742.1	ILMN_2598883	006900156	S	1023	CCTGGGGTAGCAGAAGTTGTCTTCGTGAAGAAGGATGACGCCATCACTGC				15qE1	Mus musculus polymerase (DNA-directed), delta interacting protein 3 (Poldip3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	mKIAA1649; C77954; 1110008P04Rik; AA408269; AL022852; PDIP46; KIAA1649	mKIAA1649; C77954; 1110008P04Rik; AA408269; AL022852; PDIP46; KIAA1649
Mus musculus	RefSeq	ILMN_209753	ILMN_209753	POLDIP3	NM_178627.3	NM_178627.3		73826	146198555	NM_178627.3	Poldip3	NP_848742.1	ILMN_2694397	000580356	S	3161	CCACTCCCTTGCATTATTTCTTTGTGTCTTGTTCAGGAGAAAAGAGGGCC				15qE1	Mus musculus polymerase (DNA-directed), delta interacting protein 3 (Poldip3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	mKIAA1649; C77954; 1110008P04Rik; AA408269; AL022852; PDIP46; KIAA1649	mKIAA1649; C77954; 1110008P04Rik; AA408269; AL022852; PDIP46; KIAA1649
Mus musculus	RefSeq	ILMN_256049	ILMN_256049	RNPS1	NM_001080127.1	NM_001080127.1		19826	121674789	NM_001080127.1	Rnps1	NP_001073596.1	ILMN_3123120	002750356	A	1446	TCGGCCGACCATGCCCTGCTGAGTACGCTTCAACTTAGAGGGCTAAAACC	17	+	24562488-24562537	17qA3.3	Mus musculus ribonucleic acid binding protein S1 (Rnps1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221219	ILMN_221219	CSPG5	NM_013884.2	NM_013884.2		29873	34328223	NM_013884.2	Cspg5	NP_038912.2	ILMN_2732634	007610176	S	1702	CTTGAGGGTGGCAAAGGTGACCAGGATGACTTGGGGGTGAACTGTCTGCA	9	+	110164660-110164709	9qF2	Mus musculus chondroitin sulfate proteoglycan 5 (Cspg5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]		NGC; AI604859; CALEB	NGC; AI604859; CALEB
Mus musculus	RefSeq	ILMN_208995	ILMN_208995	PSMD6	NM_025550.2	NM_025550.2		66413	46049021	NM_025550.2	Psmd6	NP_079826.2	ILMN_1241910	003940148	S	886	GCGCCTCATTACCGATACTATGTAAGAGAAATGAGAATCCATGCGTACAG	14	-	14946717-14946766	14qA1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 (Psmd6), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			2400006A19Rik	2400006A19Rik
Mus musculus	RefSeq	ILMN_208995	ILMN_208995	PSMD6	NM_025550.2	NM_025550.2		66413	46049021	NM_025550.2	Psmd6	NP_079826.2	ILMN_1254132	006180088	S	1110	CTGGCAGTATCAAGAAACCATCAAGAAAGGAGACTTGCTGCTAAACAGGG	14	-	14944835-14944884	14qA1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 (Psmd6), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			2400006A19Rik	2400006A19Rik
Mus musculus	MEEBO	ILMN_189042	ILMN_189042	SIN3B	scl33669.19_494				28212269	NM_009188	Sin3b		ILMN_2457835	002850196	S	10	GGGGATCTGCTCCTTAACGTTTTTGAGCAATTTCTGTTCCAGCTTTGACC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1741] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any chromosome other than a sex chromosome [goid 30849] [evidence IDA]; The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males [goid 805] [evidence IDA]; The sex chromosome present in males of species in which the male is the heterogametic sex; generally, the sex chromosome that pairs with the X chromosome in the heterogametic sex. The Y chromosome is absent from the cells of females and present in one copy in the somatic cells of males [goid 806] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]		
Mus musculus	RefSeq	ILMN_231161	ILMN_231161	MYO1A	NM_001081219.1	NM_001081219.1		432516	124487036	NM_001081219.1	Myo1a	NP_001074688.1	ILMN_3015387	002360753	I	2055	TCTTTTCTACCTGGAAGAACAAAGGCGCCTGAGGCTTCAGCAGCTGGCCA	10	+	127152399-127152399:127152688-127152736	10qD3	Mus musculus myosin IA (Myo1a), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IDA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell [goid 30033] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Myhl; BBM-I	Myhl; BBM-I
Mus musculus	MEEBO	ILMN_213070	ILMN_213070	1810063B07RIK	scl067509.1_36				51768243	XM_484351	1810063B07Rik		ILMN_2633223	003870097	S	819	TCCCCCTGACCTGCTGCAGTTTCATCTTTGAACTCCACTTTGATTTAGGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_206068	ILMN_206068	D930011H02RIK	ri|D930011H02|PX00200D07|AK053005|1320					AK053005	D930011H02Rik		ILMN_1241814	005130193	S	965	GCACTTCCCAGCCATGCTTCTAAGGTGTGCGGTCTGTGTGACTTGGCAGC										
Mus musculus	RefSeq	ILMN_211726	ILMN_211726	SLC2A6	NM_172659.2	NM_172659.2		227659	153945871	NM_172659.2	Slc2a6	NP_766247.2	ILMN_2618918	007400286	S	2053	CCAGTCCAAACCTTGGATACCTCTAGTCTGCCAACTGTTCACTGTTTTTC				2qA3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 6 (Slc2a6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	Glut9; Glut6; F630103L12Rik; A330096C23	Glut9; Glut6; F630103L12Rik; A330096C23
Mus musculus	RefSeq	ILMN_214324	ILMN_214324	2410022L05RIK	NM_025556.2	NM_025556.2		66423	141802113	NM_025556.2	2410022L05Rik	NP_079832.1	ILMN_1234516	005420725	S	477	TTGGCACCATCCACCTCCACTCATACCACACTACTCCAAGATGGTCTTCG	8	-	13885062-13885111	8qA1.1	Mus musculus RIKEN cDNA 2410022L05 gene (2410022L05Rik), mRNA.				AA409325; 1700029I03Rik; AI256813; MGC11316; C85432	AA409325; 1700029I03Rik; AI256813; MGC11316; C85432
Mus musculus	MEEBO	ILMN_221919	ILMN_221919	4933436E20RIK	scl52375.1.1_258	NM_027719.1			13386253	NM_027719.1	4933436E20Rik		ILMN_1239654	000010475	S	941	GAGTACCTTATCAGTTATGTCTTTTACAGATATTGTCCCCCTTTGATGGG										
Mus musculus	RefSeq	ILMN_242588	ILMN_242588	GREB1	NM_015764.1	NM_015764.1		268527	7656872	NM_015764.1	Greb1	NP_056579.1	ILMN_3006587	006580095	S	6406	GCAGAATGAAGTTTTGCCAAGTCTGCTGGCATTCACACGCTTCCATGGAC	12	-	16697549-16697598	12qA1.1	Mus musculus gene regulated by estrogen in breast cancer protein (Greb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AF180470; AU023194; 5730583K22Rik; mKIAA0575; 9130004E13	AF180470; AU023194; 5730583K22Rik; mKIAA0575; 9130004E13
Mus musculus	RefSeq	ILMN_197840	ILMN_197840	LOC230760	XM_131674.2	XM_131674.2			38078815	XM_131674.2	LOC230760		ILMN_1258339	003190551	S	518	GTCTTCGGGGCAGTGAGGAACTGATGTGTCTGAGTGGTGAACGCAGGACG										
Mus musculus	RefSeq	ILMN_197594	ILMN_197594	LOC277146	XM_204832.1	XM_204832.1			25030223	XM_204832.1	LOC277146		ILMN_1234652	003060259	S	22	GTAACTGTGATGCTGCTGTTCATGCTTGGGATGAGAAAGACCCACGGAGA										
Mus musculus	RefSeq	ILMN_215540	ILMN_215540	POLR3E	NM_025298.2	NM_025298.2		26939	31981263	NM_025298.2	Polr3e	NP_079574.2	ILMN_2660781	001070253	S	2147	CGTCGGAACTTGATCCAGTCTCGGCTGACTCAAGAATGTGGAGAAGAGCT	7	+	128088129-128088178	7qF2	Mus musculus polymerase (RNA) III (DNA directed) polypeptide E (Polr3e), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RPC5; Sin	RPC5; Sin
Mus musculus	RefSeq	ILMN_215540	ILMN_215540	POLR3E	NM_025298.2	NM_025298.2		26939	31981263	NM_025298.2	Polr3e	NP_079574.2	ILMN_2863086	006550259	S	2896	GGTGCAAACTAAACCAGGTAAGTGTGGAACAGTATATAAGCGAGGTTATC	7	+	128089681-128089730	7qF2	Mus musculus polymerase (RNA) III (DNA directed) polypeptide E (Polr3e), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RPC5; Sin	RPC5; Sin
Mus musculus	RefSeq	ILMN_193680	ILMN_259013	PLAG1	NM_019969.2	NM_019969.2		56711	46402514	NM_019969.2	Plag1	NP_064353.1	ILMN_2753595	007550437	S	1805	CCCCTCAGCACACCAGCATTGGATTTCTCTCAGTTGTTCAATTTCATACC	4	-	3831062-3831111	4qA1	Mus musculus pleiomorphic adenoma gene 1 (Plag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193680	ILMN_259013	PLAG1	NM_019969.2	NM_019969.2		56711	46402514	NM_019969.2	Plag1	NP_064353.1	ILMN_1244269	006420564	S	3097	TCTAAAGCAGTCTTGCCCGGTGAGCTCTTGCTCAGTGCGTATCCATCTTG	4	-	3829770-3829819	4qA1	Mus musculus pleiomorphic adenoma gene 1 (Plag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_259013	ILMN_259013	PLAG1	NM_019969.2	NM_019969.2		56711	46402514	NM_019969.2	Plag1	NP_064353.1	ILMN_2830811	002680553	S	3102	AGCAGTCTTGCCCGGTGAGCTCTTGCTCAGTGCGTATCCATCTTGCCCTG	4	-	3829765-3829814	4qA1	Mus musculus pleiomorphic adenoma gene 1 (Plag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186777	ILMN_232745	SUV420H1	NM_144871.3	NM_144871.3		225888	141801842	NM_144871.3	Suv420h1	NP_659120.2	ILMN_1243875	006350427	S	3940	TCTATCGAGGCTGGCGGTGTGCAGGGTGGGTTTTCAGAGCGGCTTATTTA	19	+	3816181-3816230	19qA	Mus musculus suppressor of variegation 4-20 homolog 1 (Drosophila) (Suv420h1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the addition of a methyl group onto lysine at position 20 of the histone H4 protein [goid 42799] [evidence IDA]	MGC18702; Suv4-20h1; AA117471; C630029K18Rik	MGC18702; Suv4-20h1; AA117471; C630029K18Rik
Mus musculus	RefSeq	ILMN_186777	ILMN_232745	SUV420H1	NM_144871.3	NM_144871.3		225888	141801842	NM_144871.3	Suv420h1	NP_659120.2	ILMN_1250037	001500093	S	3239	TTCCTCTTCCTCCGGCAAAGCGGCTGAGGCTAATTGTTGGTAAAGACTCC	19	+	3815480-3815529	19qA	Mus musculus suppressor of variegation 4-20 homolog 1 (Drosophila) (Suv420h1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the addition of a methyl group onto lysine at position 20 of the histone H4 protein [goid 42799] [evidence IDA]	MGC18702; Suv4-20h1; AA117471; C630029K18Rik	MGC18702; Suv4-20h1; AA117471; C630029K18Rik
Mus musculus	RefSeq	ILMN_186350	ILMN_229829	ABCG3	NM_030239.2	NM_030239.2		27405	66932958	NM_030239.2	Abcg3	NP_084515.2	ILMN_1220552	003190356	S	2916	AATATATGTTTAAGAAATCACAAAATAATAAGTAAAAGGGTCTAAGCCCT	5	-	105364144-105364193	5qE5	Mus musculus ATP-binding cassette, sub-family G (WHITE), member 3 (Abcg3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	Mxr2; Abcp2	Mxr2; Abcp2
Mus musculus	RefSeq	ILMN_186350	ILMN_229829	ABCG3	NM_030239.2	NM_030239.2		27405	66932958	NM_030239.2	Abcg3	NP_084515.2	ILMN_2649306	005810196	S	2193	AATCCTCTGAACATTAATAATTATACTCGTGGACAAATGCCACTGAGAGG	5	-	105364867-105364916	5qE5	Mus musculus ATP-binding cassette, sub-family G (WHITE), member 3 (Abcg3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	Mxr2; Abcp2	Mxr2; Abcp2
Mus musculus	Riken	ILMN_205229	ILMN_205229	TGM2	ri|E230019N23|PX00209H03|AK054108|1879					AK054108	Tgm2		ILMN_2570977	002140739	S	1787	GCCAAGGCCATCTGGGAAGCTCTTTCACAGGCCAATGTAGGACAAAGGGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IMP]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence NAS]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]		
Mus musculus	MEEBO	ILMN_222119	ILMN_222119	4930417O22RIK	scl40870.2.2_17				51766456	XM_488613	4930417O22Rik		ILMN_2744870	002470435	S	213	CAAGCATCACCTAGAGACACTGAGGGCGACTCGAAGGAAGAAGCGAACCA										
Mus musculus	RefSeq	ILMN_212899	ILMN_212899	SVS1	NM_172888.2	NM_172888.2		243377	142379844	NM_172888.2	Svs1	NP_766476.1	ILMN_1235578	000770246	S	2665	CGCTGCATCGCTGTCTATAACAACAGAAGCCTGAAGACAACTGGCTTTCC	6	+	48941611-48941660	6qB2.3	Mus musculus seminal vesicle secretory protein 1 (Svs1), mRNA.				9530003A11; MGC159338	9530003A11; MGC159338
Mus musculus	MEEBO	ILMN_184961	ILMN_184961	FTS	scl34502.14.9_18				6753917	NM_010241	Fts		ILMN_1219649	000830239	S	12	GATCTGAACGGCCAAGGAGAAAACAAAAACACGTATCTAAGGAGGAAGTG										
Mus musculus	RefSeq	ILMN_196786	ILMN_196786	LOC243833	XM_145379.1	XM_145379.1			20819776	XM_145379.1	LOC243833		ILMN_1235169	000770110	S	77	AGGGTCACGCCCTTCTGGGCCTTGGGAAAACTGAGTTAGATGGTCCAACT										
Mus musculus	RefSeq	ILMN_247701	ILMN_247701	KBTBD8	NM_001008785.1	NM_001008785.1		243574	57222239	NM_001008785.1	Kbtbd8	NP_001008785.1	ILMN_3009919	000650672	S	4062	GGCACAAAGGCTACAGCAGGATTCAAAGATCTAACAAATGCCAATCCCAC	6	+	95094679-95094728	6qD2	Mus musculus kelch repeat and BTB (POZ) domain containing 8 (Kbtbd8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1842; MGC91215; Takrp; AU040152	mKIAA1842; MGC91215; Takrp; AU040152
Mus musculus	RefSeq	ILMN_217197	ILMN_217197	CCDC47	NM_026009.2	NM_026009.2		67163	125628649	NM_026009.2	Ccdc47	NP_080285.2	ILMN_2706051	000940431	S	1678	AAGCCATGTAGAGCTGGTTGCAGAGGTTGTGTCCTTGCTGCCGTTAGCTC	11	-	106062210-106062249:106062250-106062259	11qE1	Mus musculus coiled-coil domain containing 47 (Ccdc47), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions [goid 55074] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	2610204L23Rik; C88307; RP23-81G14.10; asp4	2610204L23Rik; C88307; RP23-81G14.10; asp4
Mus musculus	RefSeq	ILMN_217197	ILMN_217197	CCDC47	NM_026009.2	NM_026009.2		67163	125628649	NM_026009.2	Ccdc47	NP_080285.2	ILMN_1249821	004640474	S	2107	ACAATAAACATTGCTTGTTTTTTCTGTGTCCACATTAAACTTGTGAAAAA	11	-	106061781-106061830	11qE1	Mus musculus coiled-coil domain containing 47 (Ccdc47), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions [goid 55074] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	2610204L23Rik; C88307; RP23-81G14.10; asp4	2610204L23Rik; C88307; RP23-81G14.10; asp4
Mus musculus	MEEBO	ILMN_215235	ILMN_215235	MYO1B	scl000791.1_2				32451999	BC054786	Myo1b		ILMN_1235044	006590554	S	2561	GCGAAGGGAGCTGAGACGGCTGAAGGACGAGGCTAGGAATAAGCACGCTA						A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_229096	ILMN_229096	AP1M1	NM_007456.1	NM_007456.1		11767	6671556	NM_007456.1	Ap1m1	NP_031482.1	ILMN_2984647	000870056	S	1852	CCTCAGCCTTTGCCCTAAAATTCCTGGGCAGGCACAGGCTACCCTCACTG	8	+	75186256-75186305	8qB3.3	Mus musculus adaptor-related protein complex AP-1, mu subunit 1 (Ap1m1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mu1A; [m]1A; Adtm1A; AA408894; Cltnm; AP47	mu1A; [m]1A; Adtm1A; AA408894; Cltnm; AP47
Mus musculus	RefSeq	ILMN_217024	ILMN_217024	NAPRT1	NM_172607.2	NM_172607.2		223646	31982088	NM_172607.2	Naprt1	NP_766195.2	ILMN_2799590	000940646	S	1629	TGCACTGTGAAGCCAGCCCAAGTGGAGCCATTGCTGCGACTCTACCTGCA	15	-	75718608-75718657	15qD3	Mus musculus nicotinate phosphoribosyltransferase domain containing 1 (Naprt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: nicotinate D-ribonucleotide + diphosphate = nicotinate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4516] [evidence IEA]	9130210N20Rik	9130210N20Rik
Mus musculus	RefSeq	ILMN_217226	ILMN_217226	GSTT1	NM_008185.2	NM_008185.2		14871	31982316	NM_008185.2	Gstt1	NP_032211.2	ILMN_2680533	000430564	S	713	AAGCCCATGAAGTCATCCTGAAGGTGAAGGACTGTCCCCCTGCTGACCTC	10	-	75251933-75251968:75254784-75254797	10qC1	Mus musculus glutathione S-transferase, theta 1 (Gstt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IDA]	AI255817; Gstt1-1	AI255817; Gstt1-1
Mus musculus	Riken	ILMN_202951	ILMN_202951	A930013B19RIK	ri|A930013B19|PX00066G01|AK044437|1409					AK044437	A930013B19Rik		ILMN_1259550	005220370	S	1057	CAGAATGCTGTGCCTTGCCAAGATGGCTTAGATTGGTCCCTGGGGTGGCT										
Mus musculus	RefSeq	ILMN_224247	ILMN_230055	SERPINA1A	NM_009243.3	NM_009243.3		20700	93102382	NM_009243.3	Serpina1a	NP_033269.1	ILMN_2777493	000360431	S	1310	TTTTGGGAAAAGTGGTAGATCCCACACATAAATGACCACCCTAAAATGTC	12	-	105091869-105091884:105091885-105091918	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 1a (Serpina1a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Spi1-3; Spi1-1; PI1; Aat-2; Dom1; Aat2; MGC117839	Spi1-3; Spi1-1; PI1; Aat-2; Dom1; Aat2; MGC117839
Mus musculus	RefSeq	ILMN_224247	ILMN_230055	SERPINA1A	NM_009243.3	NM_009243.3		20700	93102382	NM_009243.3	Serpina1a	NP_033269.1	ILMN_1225699	003710706	S	1314	GGGAAAAGTGGTAGATCCCACACATAAATGACCACCCTAAAATGTCATCC	12	-	105091865-105091884:105091885-105091914	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 1a (Serpina1a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Spi1-3; Spi1-1; PI1; Aat-2; Dom1; Aat2; MGC117839	Spi1-3; Spi1-1; PI1; Aat-2; Dom1; Aat2; MGC117839
Mus musculus	MEEBO	ILMN_190970	ILMN_190970	SCL0001242.1_16	scl0001242.1_16	AK020704.1			12861370	AK020704.1	scl0001242.1_16		ILMN_1227297	006400491	S	20	GAGGTTGCGGAAGGAGACTCCACACAGAATTCTTTAAGGGCCACAGTCCC										
Mus musculus	RefSeq	ILMN_217523	ILMN_217523	SEMA3A	NM_009152.2	NM_009152.2		20346	31543680	NM_009152.2	Sema3a	NP_033178.2	ILMN_2684289	004890563	S	5709	CCATACAAGTGATGCGGTGGCTTATGTACTACTTAAGGGCAGAGAGGGTG	5	+	13602344-13602393	5qA1	Mus musculus sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A (Sema3a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IDA]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IGI]	Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal [goid 45499] [evidence IDA]	SEMA1; SemD; Semad; Hsema-I; coll-1	SEMA1; SemD; Semad; Hsema-I; coll-1
Mus musculus	RefSeq	ILMN_211859	ILMN_211859	ALDH1B1	NM_028270.4	NM_028270.4		72535	144922649	NM_028270.4	Aldh1b1	NP_082546.1	ILMN_1257020	002650154	S	1970	TATTCAAAACCACTGACTGGCCATAAAAAGGAGTGATGGGCTGATCCCGG	4	+	45817148-45817197	4qB1	Mus musculus aldehyde dehydrogenase 1 family, member B1 (Aldh1b1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]	MGC101971; 2700007F14Rik	MGC101971; 2700007F14Rik
Mus musculus	Riken	ILMN_204717	ILMN_204717	FKBP7	ri|A530060G17|PX00142K01|AK041008|1882					AK041008	Fkbp7		ILMN_1220317	005220537	S	1578	AGTGGGTCATAGAGCATCCTTGCAGCTCCCCAGTCAGCCCACACGAAGAG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]		
Mus musculus	RefSeq	ILMN_200081	ILMN_200081	LOC385729	XM_110879.4	XM_110879.4			38080260	XM_110879.4	LOC385729		ILMN_1240141	004260743	S	940	CCTGATAAGAGGTATCAATGGAAGCAGTTCTGCCGTCAGATGGACGTAAC										
Mus musculus	RefSeq	ILMN_199181	ILMN_199181	LOC216763	XM_137575.2	XM_137575.2			38091631	XM_137575.2	LOC216763		ILMN_1252226	000730066	S	1260	TCTCAAGTCTAACCAGTGCTATGGGGTACTGGGGTTGATGGACCACCTTC										
Mus musculus	RefSeq	ILMN_221172	ILMN_221172	PDHX	NM_175094.4	NM_175094.4		27402	146198674	NM_175094.4	Pdhx	NP_780303.1	ILMN_2731894	001470612	S	2368	TGGAATCTAATGAAATAAATTCTCTTAGCATACATTGTAAATTTGTATTG				2qE2	Mus musculus pyruvate dehydrogenase complex, component X (Pdhx), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with lipoic acid, 1,2-dithiolane-3-pentanoic acid [goid 31405] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pdx1; AI481367; E3bp	Pdx1; AI481367; E3bp
Mus musculus	MEEBO	ILMN_192161	ILMN_192161	1700040A22RIK	scl2732.1.1_300						1700040A22Rik		ILMN_1246757	002450669	S	20	GCTCTAGGTCTGACATTTGGTAATCCTTTGTTTGAATCCTGCCTTTGCCC										
Mus musculus	MEEBO	ILMN_188570	ILMN_188570	RPL28	scl33127.5.1_128				6677778	NM_009081	Rpl28		ILMN_2759235	001780736	S	243	AGGGGTCGTGGTAGTTATGAAACGCAGATCCGGTCAGCGAAAACCTGCCA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188570	ILMN_188570	RPL28	scl33127.5.1_128				6677778	NM_009081	Rpl28		ILMN_2453804	006380546	S	7	GGCCTCCAAAATGTTTTGTGCTCATTGAGCTGTGGCTCTGCGCTGTCTTT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187802	ILMN_240390	MLL2	XM_994259.2	XM_994259.2		381022	149267085	XM_994259.2	Mll2	XP_999353.2	ILMN_2447228	002710228	S	368	ACCCCCAGAACCGGGGACGGAGACCTCCCCGATACACAGAATGGGAAGGT				15qF1	PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 2 (Mll2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence ISO]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197791	ILMN_240390	MLL2	XM_994259.2	XM_994259.2		381022	149267085	XM_994259.2	Mll2	XP_999353.2	ILMN_1258232	006520470	S	7517	TTTCACTGGGTCTCAGGATAGGAGCAGCATCGTGGGGCTACCCGCCAGCA				15qF1	PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 2 (Mll2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence ISO]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_203235	ILMN_203235	C030046K23RIK	ri|C030046K23|PX00075G16|AK047802|1648					AK047802	C030046K23Rik		ILMN_2555752	002630682	S	1038	GGCCACTTCTGCTGATGTAGGTGTGGACCAGGAAGAAGATGGAGCTTCCC										
Mus musculus	RefSeq	ILMN_209740	ILMN_209740	PROX1	NM_008937.2	NM_008937.2		19130	31543512	NM_008937.2	Prox1	NP_032963.1	ILMN_2894355	001090280	S	4007	CTAAGAGTGTGATCCAGGCCCCTACTTCCCCTTAGACAATCTGATGTGCA	1	-	191945736-191945785	1qH6	Mus musculus prospero-related homeobox 1 (Prox1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 45446] [evidence IMP]; The process whose specific outcome is the progression of the lymphatic vasculature over time, from its formation to the mature structure [goid 1945] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	A230003G05Rik	A230003G05Rik
Mus musculus	RefSeq	ILMN_209740	ILMN_209740	PROX1	NM_008937.2	NM_008937.2		19130	31543512	NM_008937.2	Prox1	NP_032963.1	ILMN_2598766	003140706	S	3356	GGCTCGTGGTGAGATGTGAGCTTGGCCGTGTGGACTTAGAGGAAACCCTG	1	-	191946387-191946436	1qH6	Mus musculus prospero-related homeobox 1 (Prox1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 45446] [evidence IMP]; The process whose specific outcome is the progression of the lymphatic vasculature over time, from its formation to the mature structure [goid 1945] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	A230003G05Rik	A230003G05Rik
Mus musculus	RefSeq	ILMN_221619	ILMN_221619	PIGO	NM_020035.1	NM_020035.1		56703	9910491	NM_020035.1	Pigo	NP_064419.1	ILMN_1229551	007200598	S	3208	CCTCTTGGCCTTCCCACTTATGCTGTTGCATGTAGAGCGGGTCAGCCTGG	4	-	43033873-43033922	4qA5	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class O (Pigo), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	mFLJ00350; FLJ00350	mFLJ00350; FLJ00350
Mus musculus	RefSeq	ILMN_221619	ILMN_221619	PIGO	NM_020035.1	NM_020035.1		56703	9910491	NM_020035.1	Pigo	NP_064419.1	ILMN_2997002	005900347	S	4048	AAGAGACTCCGACACACCTCTTGAGCCACCCTGTAACCAGAGACTGCTCA	4	-	43033034-43033083	4qA5	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class O (Pigo), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	mFLJ00350; FLJ00350	mFLJ00350; FLJ00350
Mus musculus	RefSeq	ILMN_221619	ILMN_221619	PIGO	NM_020035.1	NM_020035.1		56703	9910491	NM_020035.1	Pigo	NP_064419.1	ILMN_2774001	004050564	S	3675	ATGGAGATGCGCCTCCGGGATGCTCCGAATCACTTCAATGCAGCCCTGTT	4	-	43033406-43033455	4qA5	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class O (Pigo), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	mFLJ00350; FLJ00350	mFLJ00350; FLJ00350
Mus musculus	RefSeq	ILMN_221619	ILMN_221619	PIGO	NM_020035.1	NM_020035.1		56703	9910491	NM_020035.1	Pigo	NP_064419.1	ILMN_2740372	001770646	S	3215	GGCCTTCCCACTTATGCTGTTGCATGTAGAGCGGGTCAGCCTGGTGTTCC	4	-	43033866-43033915	4qA5	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class O (Pigo), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	mFLJ00350; FLJ00350	mFLJ00350; FLJ00350
Mus musculus	MEEBO	ILMN_190122	ILMN_190122	9230110F11RIK	scl33435.1.5_56						9230110F11Rik		ILMN_1227706	004890040	S	19	CCAAAATGTTTCATGCTTTTCTTGTGTCCAACAAGGACATACAAGTTGCG										
Mus musculus	RefSeq	ILMN_212048	ILMN_212048	GART	NM_010256.2	NM_010256.2		14450	93102414	NM_010256.2	Gart	NP_034386.2	ILMN_2622163	004250681	S	3035	CACTGTGGCAACGCTGTCTGAACGGGTCAAAGTGGCAGAACATAAGATCT	16	-	91621884-91621933	16qC3.3	Mus musculus phosphoribosylglycinamide formyltransferase (Gart), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine [goid 9113] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate [goid 6189] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 16742] [evidence IEA]; Catalysis of the reaction: ATP + 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine = ADP + phosphate + 5-amino-1-(5-phospho-D-ribosyl)imidazole [goid 4641] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + N1-(5-phospho-D-ribosyl)glycinamide = tetrahydrofolate + N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide [goid 4644] [evidence IEA]; Catalysis of the reaction: ATP + 5-phospho-D-ribosylamine + glycine = ADP + phosphate + N1-(5-phospho-D-ribosyl)glycinamide [goid 4637] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Gaps; Prgs	Gaps; Prgs
Mus musculus	RefSeq	ILMN_212048	ILMN_212048	GART	NM_010256.2	NM_010256.2		14450	93102414	NM_010256.2	Gart	NP_034386.2	ILMN_1225226	004560671	S	2791	CTGTAGACATCGTCTGTCTTGCAGGGTTCATGAGGATCCTCTCTGGGCCC	16	-	91623156-91623205	16qC3.3	Mus musculus phosphoribosylglycinamide formyltransferase (Gart), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine [goid 9113] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate [goid 6189] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 16742] [evidence IEA]; Catalysis of the reaction: ATP + 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine = ADP + phosphate + 5-amino-1-(5-phospho-D-ribosyl)imidazole [goid 4641] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + N1-(5-phospho-D-ribosyl)glycinamide = tetrahydrofolate + N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide [goid 4644] [evidence IEA]; Catalysis of the reaction: ATP + 5-phospho-D-ribosylamine + glycine = ADP + phosphate + N1-(5-phospho-D-ribosyl)glycinamide [goid 4637] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Gaps; Prgs	Gaps; Prgs
Mus musculus	RefSeq	ILMN_255734	ILMN_255734	OLFR1306	NM_001011803.2	NM_001011803.2		258023	113374159	NM_001011803.2	Olfr1306	NP_001011803.2	ILMN_3162277	001300315	S	689	CAAGTGGTTCCTCTAAAGCCCTATCTACTCTTTCTGCTCACATCTCTGTG	2	-	111752347-111752396	2qE3	Mus musculus olfactory receptor 1306 (Olfr1306), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR245-15	MOR245-15
Mus musculus	RefSeq	ILMN_184449	ILMN_184449	ZDHHC3	NM_026917.4	NM_026917.4		69035	34328460	NM_026917.4	Zdhhc3	NP_081193.2	ILMN_2418725	005360414	S	6	TGGTATGGGCGGGCTTTGGTTTCTGTGTGTGTAACAGCTGCACAGGAGCT	9	-	123022155-123022204	9qF4	Mus musculus zinc finger, DHHC domain containing 3 (Zdhhc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IDA]	1110020O22Rik; 1810006O10Rik; 2210017C02Rik; Zfp373; GODZ; Gramp1	1110020O22Rik; 1810006O10Rik; 2210017C02Rik; Zfp373; GODZ; Gramp1
Mus musculus	RefSeq	ILMN_184449	ILMN_184449	ZDHHC3	NM_026917.4	NM_026917.4		69035	34328460	NM_026917.4	Zdhhc3	NP_081193.2	ILMN_1225988	003140735	S	4930	GGTATGGGCGGGCTTTGGTTTCTGTGTGTGTAACAGCTGCACAGGAGCTG	9	-	122983322-122983371	9qF4	Mus musculus zinc finger, DHHC domain containing 3 (Zdhhc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IDA]	1110020O22Rik; 1810006O10Rik; 2210017C02Rik; Zfp373; GODZ; Gramp1	1110020O22Rik; 1810006O10Rik; 2210017C02Rik; Zfp373; GODZ; Gramp1
Mus musculus	Riken	ILMN_206916	ILMN_206916	A430073A17RIK	ri|A430073A17|PX00137N04|AK079805|672					AK079805	A430073A17Rik		ILMN_1236648	005050240	S	306	GCCCTGAAGGAAACATGCCCTCCTGGGAGTTTGGTGGGGCACAAAGAACA										
Mus musculus	Riken	ILMN_204807	ILMN_204807	IL1RAPL2	ri|A230103D10|PX00063A06|AK039155|2672					AK039155	Il1rapl2		ILMN_1226333	003130475	S	2061	GGAATGAAACTCTGTGGTAGACCTCTTTGGTTCTCTTACAAAATGTGGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4910] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194963	ILMN_194963	SCL0002064.1_2	scl0002064.1_2	BC069909.1			47682216	BC069909.1	scl0002064.1_2		ILMN_2511275	001050689	S	20	GCCTGGGTGATGTGGAGTGGTACATAGAGATGAAGCTGTCGTCATGGCAA										
Mus musculus	MEEBO	ILMN_185397	ILMN_185397	1700104A03RIK	scl36943.2.1_2						1700104A03Rik		ILMN_1222438	003440202	S	11	GCACCTTGTGATGCTTCCAGAAGGCATCTTTCCAATTATGTGGTATGTCC										
Mus musculus	MEEBO	ILMN_188806	ILMN_188806	SCL0001185.1_221	scl0001185.1_221	M11859.1			201434	M11859.1	scl0001185.1_221		ILMN_2455888	004220543	S	10	CCCAACTTATCCTTTTCATCTATGACAGTTTTAAATGCATATCTTGAAGA										
Mus musculus	RefSeq	ILMN_195488	ILMN_241529	ARL10	NM_019968.1	NM_019968.1		56795	9910333	NM_019968.1	Arl10	NP_064352.1	ILMN_1247679	002140750	S	648	TTATAACCAGAGGGAGGTTTTCCTCTTGGCAGCCAGCATTGCCCCTGCAG	13	+	54682141-54682190	13qB1	Mus musculus ADP-ribosylation factor-like 10 (Arl10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC144317; Arm1; Arl10a	MGC144317; Arm1; Arl10a
Mus musculus	Riken	ILMN_202111	ILMN_202111	CCNC	ri|2810440C01|ZX00066F23|AK013273|1248					AK013273	Ccnc		ILMN_1228944	002030240	S	1057	AACATGCAGGAAGTTGTATGCTTGGGCTAAGCGTTGAGCAGGCTTTCCAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	MEEBO	ILMN_219139	ILMN_219139	A730045E13RIK	scl0208924.2_322	NM_206972.1			46195441	NM_206972.1	A730045E13Rik		ILMN_1252461	003780494	S	789	CCTAGGCTTGGCTGGGGCTCATAAAGGTGTTGAAGAATTGCTTATGCCTG										
Mus musculus	MEEBO	ILMN_187946	ILMN_187946	DEF8	scl33199.18.1_17				31560006	NM_054046	Def8		ILMN_2448496	001190722	S	5	AGCCGGCAAAGGACTGGGACCATGGAATACCTTCAGAAGCATGACCTCAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_223686	ILMN_223686	BCOR	scl071458.1_1				28144862	NM_029510	Bcor		ILMN_1254808	002630360	S	5606	ATGCTTTGAAATGTATGTTCGTTTTTACTTGGAACATTTTTCTTTTCTGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]			
Mus musculus	MEEBO	ILMN_220942	ILMN_220942	A430057M04RIK	scl46569.4.1_21	NM_176925.2			31342403	NM_176925.2	A430057M04Rik		ILMN_2728929	002470563	S	3262	GGGACTCTGGATAAGGAGAGGGCATGTGGGCCTTTGACTCGGGATGGAAG										
Mus musculus	RefSeq	ILMN_218638	ILMN_218638	EFNB1	NM_010110.2	NM_010110.2		13641	31560599	NM_010110.2	Efnb1	NP_034240.1	ILMN_2698443	001400152	S	3088	GGGAGCAAAACAGCCAGCCCCTTCCAGGTGGCAGTCGGAAGGGATTTTTG	X	+	95351540-95351589	XqC3	Mus musculus ephrin B1 (Efnb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an ephrin receptor [goid 46875] [evidence IPI]	Eplg2; Stra1; Lerk2; LERK-2; Epl2; Elk-L; EFL-3; Cek5-L	Eplg2; Stra1; Lerk2; LERK-2; Epl2; Elk-L; EFL-3; Cek5-L
Mus musculus	RefSeq	ILMN_197769	ILMN_225046	GM659	XM_001001226.2	XM_001001226.2		271944	149251306	XM_001001226.2	Gm659	XP_001001226.2	ILMN_1256606	007380609	S	956	CTCAGCGGAGCCGGGTGGTCCAGAGCAGCTGCAACCCTATCTTCAACGAA	3	+	94168129-94168178	3qF2.1	PREDICTED: Mus musculus gene model 659, (NCBI) (Gm659), mRNA.					
Mus musculus	RefSeq	ILMN_197530	ILMN_197530	LOC219106	XM_139078.2	XM_139078.2			38076445	XM_139078.2	LOC219106		ILMN_2528456	006900112	S	528	CAGCAGTACCCCAGAGGAGTGTGAGGAGGTACATGGAAAACCTGAGAAGA										
Mus musculus	RefSeq	ILMN_198025	ILMN_198025	LOC327816	XM_282941.2	XM_282941.2			38080476	XM_282941.2	LOC327816		ILMN_1245434	006900670	S	159	GGAAATTAAAGATGATAGCTCTGCAGCAGGACCAGATGGGTTTAGTGCAG										
Mus musculus	RefSeq	ILMN_221540	ILMN_221540	MORC2B	NM_177719.2	NM_177719.2		240069	31343218	NM_177719.2	Morc2b	NP_808387.1	ILMN_2872287	000110148	S	3474	CATTCAGACGCTCCTGCAAATGGCTCAGCAGGGCATAAACATCAGGGCAG	17	-	32872586-32872635	17qB1	Mus musculus microrchidia 2B (Morc2b), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	4932411A10Rik; Tce6	4932411A10Rik; Tce6
Mus musculus	RefSeq	ILMN_212221	ILMN_212221	HES5	NM_010419.2	NM_010419.2		15208	31560581	NM_010419.2	Hes5	NP_034549.1	ILMN_1253414	002350386	S	743	GTGTGTGCAGAGTTGTCATTTGGGGATAATCAGGGCCCACCCTCTGCCGC	4	+	153805641-153805690	4qE2	Mus musculus hairy and enhancer of split 5 (Drosophila) (Hes5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into an auditory hair cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 42668] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	Riken	ILMN_205502	ILMN_205502	TXNL2	ri|D130051B17|PX00184B06|AK051468|3440					AK051468	Txnl2		ILMN_1238489	001690142	S	3338	GGAGGAGAAACAAACCCGGAGAGGGAGAATGAGACTTTCGTCAGCCTGGC										
Mus musculus	Riken	ILMN_207230	ILMN_207230	E130301F21RIK	ri|E130301F21|PX00675O01|AK087467|3890					AK087467	E130301F21Rik		ILMN_1215536	005570133	S	2606	CAAGAGGAGGACTCCCCCAGCTACTTTTTACTGTATCAGCAATGCAGTGG										
Mus musculus	RefSeq	ILMN_217940	ILMN_217940	DIRAS1	NM_145217.2	NM_145217.2		208666	40254099	NM_145217.2	Diras1	NP_660252.1	ILMN_1220054	000060128	S	2858	GTGGGGTCTGTGTACCGTTCTCTCGTAGACCTTGTCTTCCTGCAATAAAC	10	-	80482386-80482435	10qC1	Mus musculus DIRAS family, GTP-binding RAS-like 1 (Diras1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	RIG; Gbts1; Di-Ras1	RIG; Gbts1; Di-Ras1
Mus musculus	RefSeq	ILMN_215343	ILMN_215343	NKTR	NM_010918.2	NM_010918.2		18087	62526129	NM_010918.2	Nktr	NP_035048.3	ILMN_2658380	004210338	S	3042	GCCCCAGAAGCAAAAACACTCAAAGGATGATCTTAAGGGGGATCACACAA	9	+	121658883-121658932	9qF4	Mus musculus natural killer tumor recognition sequence (Nktr), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	5330401F18Rik; D9Wsu172e	5330401F18Rik; D9Wsu172e
Mus musculus	RefSeq	ILMN_212988	ILMN_250494	OLFR1353	NM_147042.1	NM_147042.1		259044	22128864	NM_147042.1	Olfr1353	NP_667253.1	ILMN_2632327	004730044	S	787	GCTGCAAACCATGGGTCACAAACAAGTGCAACAGCCTCAGTCACGTACAC	10	+	78433182-78433231	10qC1	Mus musculus olfactory receptor 1353 (Olfr1353), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR139-2	MOR139-2
Mus musculus	RefSeq	ILMN_192017	ILMN_244890	TBX18	NM_023814.3	NM_023814.3		76365	142387339	NM_023814.3	Tbx18	NP_076303.2	ILMN_1246123	006270241	S	3045	CCATAGCTTATGCTGATTTATTTTCTGAAGGAAGGTGGATGACAGCCTTG	9	-	87599219-87599268	9qE3.1	Mus musculus T-box18 (Tbx18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	2810404D13Rik; 2810012F10Rik	2810404D13Rik; 2810012F10Rik
Mus musculus	RefSeq	ILMN_210857	ILMN_210857	PRSS35	NM_178738.2	NM_178738.2		244954	142386569	NM_178738.2	Prss35	NP_848853.1	ILMN_2609897	004900296	S	3355	CTCTGTAAATGGTCCTCAAAACGTGTGGCGTTCTTTCATAATGTGGGTTG	9	+	86651620-86651634	9qE3.1	Mus musculus protease, serine, 35 (Prss35), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	6030424L22Rik; P3D9	6030424L22Rik; P3D9
Mus musculus	RefSeq	ILMN_216697	ILMN_216697	GLDC	NM_138595.1	NM_138595.1		104174	20070407	NM_138595.1	Gldc	NP_613061.1	ILMN_1218747	006590097	S	3221	GAGGGCTTCTTCTTAGTCCTCCCTCCTACGTTCAAAGGGCTGACCCGATG	19	-	30173422-30173456:30173457-30173471	19qC1	Mus musculus glycine decarboxylase (Gldc), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [evidence IEA];  [goid 19464] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 [goid 4375] [evidence ISO]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]	D030049L12Rik; D19Wsu57e	D030049L12Rik; D19Wsu57e
Mus musculus	RefSeq	ILMN_216697	ILMN_216697	GLDC	NM_138595.1	NM_138595.1		104174	20070407	NM_138595.1	Gldc	NP_613061.1	ILMN_2873750	005560468	S	3658	GTGCCTGATCTGTCACAGCATAAGTGTCCTCCTTTCACTGTGCGGACTTT	19	-	30172985-30173034	19qC1	Mus musculus glycine decarboxylase (Gldc), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [evidence IEA];  [goid 19464] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 [goid 4375] [evidence ISO]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]	D030049L12Rik; D19Wsu57e	D030049L12Rik; D19Wsu57e
Mus musculus	RefSeq	ILMN_253592	ILMN_253592	PARD3	NM_001013580.1	NM_001013580.1		93742	61888841	NM_001013580.1	Pard3	NP_001013598.1	ILMN_3136369	003400343	A	1886	CACCTGAGCTGCCCATCGAGACAGAACTGGATGACCGAGAACGCAGGATC	8	+	130284715-130284764	8qE2	Mus musculus par-3 (partitioning defective 3) homolog (C. elegans) (Pard3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IC ]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ASIP; AI256638; PAR-3; AA960621; Par3; D8Ertd580e	ASIP; AI256638; PAR-3; AA960621; Par3; D8Ertd580e
Mus musculus	RefSeq	ILMN_233463	ILMN_233463	HIGD1C	NM_001002900.1	NM_001002900.1		380975	51100969	NM_001002900.1	Higd1c	NP_001002900.1	ILMN_2819924	005960612	S	347	AGAAGCTGGAAGCAAGGACGGCCGGCTCCTTCAGTGCTAGCATCAGAAAA	15	+	100214227-100214276	15qF1	Mus musculus HIG1 domain family, member 1C (Higd1c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			UbiE2; Gm921; Yghl1-4; HIG1-4	UbiE2; Gm921; Yghl1-4; HIG1-4
Mus musculus	MEEBO	ILMN_187780	ILMN_187780	1810058N15RIK	scl52845.2.1_51						1810058N15Rik		ILMN_2447050	004180543	S	10	GGCGGGTGTATTCGCCCAAACTCTCCTGGTCATAAACAGCCGGATTTCAG										
Mus musculus	RefSeq	ILMN_201022	ILMN_201022	LOC382308	XM_358725.1	XM_358725.1			38087958	XM_358725.1	LOC382308		ILMN_2540817	004200554	S	79	TCTTTTCCTACTCTTGGACCTTTGCCACCATCACCTCGAGAACCTGGTAC										
Mus musculus	MEEBO	ILMN_186354	ILMN_186354	4930512B01RIK	scl0074724.1_22				51766879	XM_484154	4930512B01Rik		ILMN_2434835	003610543	S	20	ATTTGATGTTGCAAGAGTATCTTTGTTTTTAAGAGTTGACCAATTCAGCT										
Mus musculus	MEEBO	ILMN_186354	ILMN_186354	4930512B01RIK	scl0074724.1_22				51766879	XM_484154	4930512B01Rik		ILMN_1229563	007550612	S	1265	TTAAGTACAAGATGGCGATCTTATTACTAATTTCCATACTTGGGTGGAGC										
Mus musculus	Riken	ILMN_202426	ILMN_202426	1600023H17RIK	ri|1600023H17|ZX00050I11|AK005527|999					AK005527	1600023H17Rik		ILMN_1220085	002940403	S	921	GCACATTGGAGTGAACTGGAATGGAGTCTAGCAAAGTCGTGACTGCTGTC										
Mus musculus	RefSeq	ILMN_201133	ILMN_201133	LOC384842	XM_357896.1	XM_357896.1			38089332	XM_357896.1	LOC384842		ILMN_2541206	007550537	S	747	TGGAGGTGCTTATGTGGACCCAGCACCCATCGCCAGTCACATTGTCAGCG										
Mus musculus	RefSeq	ILMN_221592	ILMN_253552	SEMA4C	XM_985534.1	XM_985534.1		20353	94363202	XM_985534.1	Sema4c	XP_990628.1	ILMN_1242146	006940020	S	3344	TGTTGTACCCCTTTTGGGGGAGTGCGGGACTCGGGGGTGGGCCTAGCCCT				1qB	PREDICTED: Mus musculus sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C (Sema4c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199641	ILMN_199641	LOC382821	XM_356698.1	XM_356698.1			38075422	XM_356698.1	LOC382821		ILMN_1230794	005670133	S	226	TTCTCCTTCTCACCAGGAACACCTGACCCAGCAGTGGCCCTTCCTTTAAG										
Mus musculus	RefSeq	ILMN_218565	ILMN_243448	ABHD9	NM_001033163.3	NM_001033163.3		71932	146198647	NM_001033163.3	Abhd9	NP_001028335.1	ILMN_1222751	001990139	S	1313	CATTGATATGTTGGAGCACATATCCCCTGTCCTTGTGTACCTGGGAGTCC				17qB1	Mus musculus abhydrolase domain containing 9 (Abhd9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2310063B19Rik	2310063B19Rik
Mus musculus	RefSeq	ILMN_221669	ILMN_221669	OLFR645	NM_207144.1	NM_207144.1		258247	46369494	NM_207144.1	Olfr645	NP_997027.1	ILMN_1238709	003930053	S	660	TATGTGCTTATCCTGCGATCTGTGCTGGCCATTGCGTCTCGGGAGGAGCG	7	-	111232883-111232932	7qE3	Mus musculus olfactory receptor 645 (Olfr645), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR13-5	MOR13-5
Mus musculus	RefSeq	ILMN_224119	ILMN_258902	SKIL	NM_011386.2	NM_011386.2		20482	84875516	NM_011386.2	Skil	NP_035516.2	ILMN_2775130	001780408	S	2857	ATTCTGTTCATTTGTATGGCAGCAAAAGTGAAGATTATATATTAATACAA	3	+	31017639-31017688	3qA3	Mus musculus SKI-like (Skil), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SnoN2; sno; 9130011J04Rik; sno-dE3; Skir; SnoN	SnoN2; sno; 9130011J04Rik; sno-dE3; Skir; SnoN
Mus musculus	RefSeq	ILMN_187421	ILMN_258902	SKIL	NM_011386.2	NM_011386.2		20482	84875516	NM_011386.2	Skil	NP_035516.2	ILMN_2443990	006650750	S	6351	GGCAGTAAGTGAATGGTCCCTTCTGCAACTACTGAAACAAATTAGCTACA	3	+	31021133-31021182	3qA3	Mus musculus SKI-like (Skil), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SnoN2; sno; 9130011J04Rik; sno-dE3; Skir; SnoN	SnoN2; sno; 9130011J04Rik; sno-dE3; Skir; SnoN
Mus musculus	RefSeq	ILMN_187433	ILMN_247156	TOMM22	NM_172609.3	NM_172609.3		223696	142383435	NM_172609.3	Tomm22	NP_766197.2	ILMN_2507182	001010497	S	846	GAGTACAGAAGTCACCAGGAATCCCAGAGAGAAGGGAGGCTGGCTGTAGC	15	+	79503114-79503163	15qE1	Mus musculus translocase of outer mitochondrial membrane 22 homolog (yeast) (Tomm22), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Tom22; 2310047D01	Tom22; 2310047D01
Mus musculus	RefSeq	ILMN_209815	ILMN_209815	POU3F3	NM_008900.2	NM_008900.2		18993	112421035	NM_008900.2	Pou3f3	NP_032926.2	ILMN_1212804	004290681	S	1406	AGACGCCGGACGATGTCTACTCGCAGGTGGGTACCGTGAGCGCTGACACA	1	+	42755396-42755445	1qB	Mus musculus POU domain, class 3, transcription factor 3 (Pou3f3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The mitotic division of a basal progenitor giving rise to two neurons [goid 21869] [evidence IGI]; The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain [goid 21799] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence ISO]	Otf8; Skin1; Brn1; Brn-1	Otf8; Skin1; Brn1; Brn-1
Mus musculus	MEEBO	ILMN_218603	ILMN_218603	B230378H13RIK	scl34998.4_500	NM_177089.3			40556385	NM_177089.3	B230378H13Rik		ILMN_2705499	005670546	S	1281	GACCAGATGTCTCCTAAGCTAGATCCGAGTAAACGGAGTCATCCCCCCGC										
Mus musculus	MEEBO	ILMN_218603	ILMN_218603	B230378H13RIK	scl34998.4_500	NM_177089.3			40556385	NM_177089.3	B230378H13Rik		ILMN_1217174	005270040	S	1271	TGCCTTGCTCGACCAGATGTCTCCTAAGCTAGATCCGAGTAAACGGAGTC										
Mus musculus	RefSeq	ILMN_201580	ILMN_201580	PDZGEF1	XM_203999.3	XM_203999.3			38076579	XM_203999.3	Pdzgef1		ILMN_1225911	002850634	S	4519	TTCGCAGGAGCGGAGGAGGACGTGACACAGGCTGGGGATCAAGGTTTTCA										
Mus musculus	RefSeq	ILMN_198470	ILMN_198470	LOC381237	XM_358533.1	XM_358533.1			38085335	XM_358533.1	LOC381237		ILMN_1223883	001400750	S	695	TGCGCCAGTTCAGGCATGGTGGAAAAGGCTACAAATCCTGGGAGAATAGG										
Mus musculus	Riken	ILMN_202461	ILMN_202461	4930577M16RIK	ri|4930577M16|PX00036O24|AK016295|1338					AK016295	4930577M16Rik		ILMN_1219369	002650014	S	1261	GTGCCTATTAGCAAGACCGGAGCTACCCAGTCAATGCCAGTCAATGGCTC										
Mus musculus	RefSeq	ILMN_209437	ILMN_310720	FPR-RS3	XR_035364.1	XR_035364.1		14290	149268596	XR_035364.1	Fpr-rs3		ILMN_2595763	005960689	S	792	TAATATCTGGAATAAGGAGACACCAAGCAGCATTCACATTTTGTTGAACC	17	-	20761000-20761049	17qA3.2	PREDICTED: Mus musculus formyl peptide receptor, related sequence 3 (Fpr-rs3), misc RNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210203	ILMN_211918	NOL6	NM_139236.3	NM_139236.3		230082	134031987	NM_139236.3	Nol6	NP_631982.2	ILMN_1225734	003360575	S	3033	TGAGCCTGGCGGCTGAAGCCCTCCCTATCCTAGAGAAGCAGCTGATGGAT	4	-	41063432-41063481	4qA5	Mus musculus nucleolar protein family 6 (RNA-associated) (Nol6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nrap; AA410091	Nrap; AA410091
Mus musculus	RefSeq	ILMN_210203	ILMN_211918	NOL6	NM_139236.3	NM_139236.3		230082	134031987	NM_139236.3	Nol6	NP_631982.2	ILMN_1219208	004920050	S	4370	CTGTGAATGCGATTATTCCTTGTCGAGTTCACTTGGCAGGCATGCATACC	4	-	41061523-41061572	4qA5	Mus musculus nucleolar protein family 6 (RNA-associated) (Nol6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nrap; AA410091	Nrap; AA410091
Mus musculus	Riken	ILMN_202781	ILMN_202781	4632428D17RIK	ri|4632428D17|PX00013G23|AK028549|2761					AK028549	4632428D17Rik		ILMN_2552243	002060634	S	2545	TGTGTTTGTGTGTGGGTATCCACCAGACCACCCAGGCTCACTCAGACGTG										
Mus musculus	Riken	ILMN_204119	ILMN_204119	B130045C05RIK	ri|B130045C05|PX00158E12|AK045190|3159					AK045190	B130045C05Rik		ILMN_1236576	002630162	S	2979	CCTTTCCAAGTGCAGGGCATTCTAGGTGTGCCAGGTTATGTCTGGCTTGC										
Mus musculus	RefSeq	ILMN_221536	ILMN_221536	PLEKHF2	NM_175175.3	NM_175175.3		71801	31560749	NM_175175.3	Plekhf2	NP_780384.1	ILMN_2768285	004830463	S	2581	CTCCCTGTAGGAAATGTGAAAAAAAGCACAATAGAACCAGGCTAGGGGCT	4	-	10916039-10916088	4qA1	Mus musculus pleckstrin homology domain containing, family F (with FYVE domain) member 2 (Plekhf2), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZFYVE18; 1110070J07Rik; AA673237	ZFYVE18; 1110070J07Rik; AA673237
Mus musculus	RefSeq	ILMN_221536	ILMN_221536	PLEKHF2	NM_175175.3	NM_175175.3		71801	31560749	NM_175175.3	Plekhf2	NP_780384.1	ILMN_2798694	002120707	S	2545	TGCTGCTCAGTTTTGAAAGTGTGTGAGCTACATAGGTCTCCCTGTAGGAA	4	-	10916075-10916124	4qA1	Mus musculus pleckstrin homology domain containing, family F (with FYVE domain) member 2 (Plekhf2), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZFYVE18; 1110070J07Rik; AA673237	ZFYVE18; 1110070J07Rik; AA673237
Mus musculus	RefSeq	ILMN_221536	ILMN_221536	PLEKHF2	NM_175175.3	NM_175175.3		71801	31560749	NM_175175.3	Plekhf2	NP_780384.1	ILMN_1237736	003450364	S	1273	GGTATCTGGCTTTTCCCCAAGCAGTCGATGTCAAGGTTACGACACCAGTG	4	-	10917347-10917396	4qA1	Mus musculus pleckstrin homology domain containing, family F (with FYVE domain) member 2 (Plekhf2), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZFYVE18; 1110070J07Rik; AA673237	ZFYVE18; 1110070J07Rik; AA673237
Mus musculus	RefSeq	ILMN_213874	ILMN_211444	MRPL48	NM_198831.2	NM_198831.2		52443	148368963	NM_198831.2	Mrpl48	NP_942128.2	ILMN_1236131	007210398	S	513	GGAAGTGATGCGACTGCCAGACCAAGGCAACAAAATGGTCCTAGACTCCA				7qE3	Mus musculus mitochondrial ribosomal protein L48 (Mrpl48), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	D4Ertd786e; CGI-118; 1810030E20Rik; 2610028L11Rik	D4Ertd786e; CGI-118; 1810030E20Rik; 2610028L11Rik
Mus musculus	RefSeq	ILMN_213874	ILMN_211444	MRPL48	NM_198831.2	NM_198831.2		52443	148368963	NM_198831.2	Mrpl48	NP_942128.2	ILMN_1216122	004920291	S	241	CTGTGGACCAGTCGGCACTACAAGACAAAGCCCACTCGTGGCATCGGAAG				7qE3	Mus musculus mitochondrial ribosomal protein L48 (Mrpl48), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	D4Ertd786e; CGI-118; 1810030E20Rik; 2610028L11Rik	D4Ertd786e; CGI-118; 1810030E20Rik; 2610028L11Rik
Mus musculus	RefSeq	ILMN_198427	ILMN_198427	LOC381219	XM_355157.1	XM_355157.1			38085058	XM_355157.1	LOC381219		ILMN_1232152	001710735	S	2542	GATCAAGCAAACGACCTGGTTGACGTGGTTCTTGGGGTCTTCCTTATCTG										
Mus musculus	RefSeq	ILMN_217641	ILMN_217641	MPDU1	NM_011900.3	NM_011900.3		24070	142347827	NM_011900.3	Mpdu1	NP_036030.2	ILMN_2685811	004180301	S	621	CAGCTTTCAGCCATTACAGTGTTTATGCTGTTTGGGGGCTCCTTGGCCCG	11	-	69470940-69470989	11qB3	Mus musculus mannose-P-dolichol utilization defect 1 (Mpdu1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SL15; Supl15h; LEC35	SL15; Supl15h; LEC35
Mus musculus	RefSeq	ILMN_212878	ILMN_228207	IGK-V5	XM_992091.1	XM_992091.1		381777	94378718	XM_992091.1	Igk-V5	XP_997185.1	ILMN_1228607	004640113	S	60	GGCTGTTGGTGCTGATGTTCTGGATTCCTGCTTCCAGCAGTGATGTTGTG				6qC1	PREDICTED: Mus musculus immunoglobulin kappa chain variable 5 (V5 family) (Igk-V5), mRNA.					
Mus musculus	RefSeq	ILMN_212878	ILMN_228207	IGK-V5	XM_992091.1	XM_992091.1		381777	94378718	XM_992091.1	Igk-V5	XP_997185.1	ILMN_2631259	002030372	S	334	CAAGATCAGCAGAGTGGAGGCTGAGGATCTGGGAGTTTATTTCTGCTCTC				6qC1	PREDICTED: Mus musculus immunoglobulin kappa chain variable 5 (V5 family) (Igk-V5), mRNA.					
Mus musculus	RefSeq	ILMN_198290	ILMN_198290	LOC240219	XM_140284.2	XM_140284.2			38083667	XM_140284.2	LOC240219		ILMN_2531156	001660408	S	468	ACCCCAAGGCCCGTATTACTACTCAGACAAGACCTATGGCAGGGACATCG										
Mus musculus	MEEBO	ILMN_193359	ILMN_193359	TJP2	scl52642.29_318				7549794	NM_011597	Tjp2		ILMN_2773769	003440010	S	3204	CAGTCCTGGGCAGAGTGAAAATATTCGAGAAGATGGACCACAAGGCAAAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216965	ILMN_216965	MOSPD3	NM_030037.1	NM_030037.1		68929	28077072	NM_030037.1	Mospd3	NP_084313.1	ILMN_2677531	005090632	S	1054	CATGGTGCTCCTCCGGACCTGAACTCTCAGCTGAACCCACCTCACCCACC	5	-	138038221-138038249:138038250-138038270	5qG2	Mus musculus motile sperm domain containing 3 (Mospd3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	1190005J19Rik; 5133401H10Rik	1190005J19Rik; 5133401H10Rik
Mus musculus	RefSeq	ILMN_216965	ILMN_216965	MOSPD3	NM_030037.1	NM_030037.1		68929	28077072	NM_030037.1	Mospd3	NP_084313.1	ILMN_3153772	004290360	A	1111	TCGCAGGCAGGGACCTAAGGCAGCCACTGTGATGTTTGCACCTTGCTCCT	5	-	138038164-138038213	5qG2	Mus musculus motile sperm domain containing 3 (Mospd3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	1190005J19Rik; 5133401H10Rik	1190005J19Rik; 5133401H10Rik
Mus musculus	RefSeq	ILMN_220982	ILMN_220982	EFEMP2	NM_021474.2	NM_021474.2		58859	31982689	NM_021474.2	Efemp2	NP_067449.2	ILMN_2866901	000630341	S	1697	CCCGGGGGCCTAGGGATGACCGTTCTGCTTAAAGGAACTATGATGTGAAG	19	+	5481769-5481818	19qA	Mus musculus epidermal growth factor-containing fibulin-like extracellular matrix protein 2 (Efemp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]	0610011K11Rik; MBP1	0610011K11Rik; MBP1
Mus musculus	RefSeq	ILMN_221131	ILMN_221131	DIDO1	NM_175551.3	NM_175551.3		23856	76096374	NM_175551.3	Dido1	NP_780760.2	ILMN_1245250	004560707	S	8075	CAGATAGAGAATTAGCTTCGTTTGTTCTTCGGAGTCTTATTTCACTGTAC	2	-	180393017-180393066	2qH4	Mus musculus death inducer-obliterator 1 (Dido1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Datf1; D130048F08Rik; C530043I07; Dido3; Dido2; mKIAA0333; 6720461J16Rik; DIO-1	Datf1; D130048F08Rik; C530043I07; Dido3; Dido2; mKIAA0333; 6720461J16Rik; DIO-1
Mus musculus	RefSeq	ILMN_219953	ILMN_327207	LOC100047421	XM_001479002.1	XM_001479002.1		100047421	149267138	XM_001479002.1	LOC100047421	XP_001479052.1	ILMN_2772446	006770095	S	1942	TCATTTTTATATTATGAGAAGAGTAAAATTTTCAAATTGGCTGATAATTG					PREDICTED: Mus musculus similar to activating transcription factor 1 (LOC100047421), mRNA.					
Mus musculus	Riken	ILMN_203659	ILMN_203659	9430045C13RIK	ri|9430045C13|PX00109I02|AK034833|2675					AK034833	9430045C13Rik		ILMN_1230196	004830278	S	2403	GACCAGCCAGTCAAGTCAAAATGGCAAGTTCCAGGTTCAGCAAGAGACCC										
Mus musculus	RefSeq	ILMN_201439	ILMN_248539	TMEM181	NM_001033178.1	NM_001033178.1		77106	75677513	NM_001033178.1	Tmem181	NP_001028350.1	ILMN_1245263	004670504	S	390	CCATGACAGTGAAGGTCGATGGTGTGTCTCAAGATGGAACCACGACGTAC	17	+	6290582-6290631	17qA1	Mus musculus transmembrane protein 181 (Tmem181), mRNA.				Gpr178; 5930418K15Rik; mKIAA1423	Gpr178; 5930418K15Rik; mKIAA1423
Mus musculus	RefSeq	ILMN_213317	ILMN_230456	CD22	NM_001043317.1	NM_001043317.1		12483	112807202	NM_001043317.1	Cd22	NP_001036782.1	ILMN_1221913	005490608	S	2923	CGGCCCCAGGCAAAGGAAGACGTAGACTATGTGACCCTCAAGCACTGAGG	7	-	31651547-31651549:31651550-31651596	7qB1	Mus musculus CD22 antigen (Cd22), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IPI]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [evidence TAS]	Lyb-8; A530093D23; Lyb8	Lyb-8; A530093D23; Lyb8
Mus musculus	RefSeq	ILMN_205102	ILMN_257647	ASB14	NM_080856.2	NM_080856.2		142687	122891865	NM_080856.2	Asb14	NP_543132.2	ILMN_1250663	002260167	S	828	CATGCAACTACTACTGCAGAAAGGAGCTGACGTTCACAGTCAGGCCTCTG	14	+	27716652-27716674:27724483-27724509	14qA3	Mus musculus ankyrin repeat and SOCS box-containing 14 (Asb14), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		Asb-14	Asb-14
Mus musculus	MEEBO	ILMN_195749	ILMN_195749	1700017N19RIK	scl38486.15.1_15				51765891	XM_487140	1700017N19Rik		ILMN_1255361	007150379	S	12	GCCTGGAGGTTGAGAGAAGAGGAAAATGAGGAAAGAGAGAAGCTCCAGCC										
Mus musculus	RefSeq	ILMN_200720	ILMN_200720	LOC384508	XM_357681.1	XM_357681.1			38085444	XM_357681.1	LOC384508		ILMN_2539768	006650609	S	40	GCAGAGGCTGGAACACCCACAGTGCAGGAACACCATAGTGCAGGAACACC										
Mus musculus	RefSeq	ILMN_193452	ILMN_227174	FUT10	NM_134161.2	NM_134161.2		171167	42476112	NM_134161.2	Fut10	NP_598922.1	ILMN_2665035	007200132	S	2679	CAGTAGAGACGGAGGGGCAGTCACACTAAGCCTGAAGAATCGTCCTCTCC	8	+	32347983-32348032	8qA3	Mus musculus fucosyltransferase 10 (Fut10), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IEA]	MGC40819	MGC40819
Mus musculus	Riken	ILMN_205487	ILMN_205487	DDX20	ri|D030043D13|PX00180J20|AK050950|2282					AK050950	Ddx20		ILMN_2572932	006770201	S	1921	CTGAGCCATCTCGCCAGCCCAGGAAGACTGTTTCTTAATGGTCTGCTAGC						A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IPI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199294	ILMN_199294	LOC212117	XM_142675.3	XM_142675.3			38093960	XM_142675.3	LOC212117		ILMN_1235792	006350520	S	897	GTGCAGTTCTAAGGAGATGGTAACTGAACAGACGTTCAGGCAGGGACCCC										
Mus musculus	RefSeq	ILMN_201078	ILMN_244740	GRM5	NM_001081414.1	NM_001081414.1		108071	126116569	NM_001081414.1	Grm5	NP_001074883.1	ILMN_1248753	004390161	S	658	GTACTTCATGAGGGTTGTACCTTCGGATGCCCAGCAAGCCCGAGCCATGG	7	+	94751608-94751657	7qE1	Mus musculus glutamate receptor, metabotropic 5 (Grm5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A G-protein coupled receptor that binds glutamate and is linked to the inositol 1,4,5-trisphosphate/calcium signaling system [goid 1639] [evidence TAS]	Gprc1e; mGluR5; AI850523; 6430542K11Rik	Gprc1e; mGluR5; AI850523; 6430542K11Rik
Mus musculus	RefSeq	ILMN_208701	ILMN_244740	GRM5	NM_001081414.1	NM_001081414.1		108071	126116569	NM_001081414.1	Grm5	NP_001074883.1	ILMN_1242601	007380440	S	4293	CAGGCTGTGAGATACTCTTCCAAAAGCCTGCATCCTGGATTCCATTAACC	7	+	95280053-95280102	7qE1	Mus musculus glutamate receptor, metabotropic 5 (Grm5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A G-protein coupled receptor that binds glutamate and is linked to the inositol 1,4,5-trisphosphate/calcium signaling system [goid 1639] [evidence TAS]	Gprc1e; mGluR5; AI850523; 6430542K11Rik	Gprc1e; mGluR5; AI850523; 6430542K11Rik
Mus musculus	RefSeq	ILMN_201077	ILMN_244740	GRM5	NM_001081414.1	NM_001081414.1		108071	126116569	NM_001081414.1	Grm5	NP_001074883.1	ILMN_1226905	005080196	S	1727	GTTTTTGATGAGTACACCTGCAAGGCGTGCCAACTGGGGTCCTGGCCCAC	7	+	95188556-95188605	7qE1	Mus musculus glutamate receptor, metabotropic 5 (Grm5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A G-protein coupled receptor that binds glutamate and is linked to the inositol 1,4,5-trisphosphate/calcium signaling system [goid 1639] [evidence TAS]	Gprc1e; mGluR5; AI850523; 6430542K11Rik	Gprc1e; mGluR5; AI850523; 6430542K11Rik
Mus musculus	Riken	ILMN_206354	ILMN_206354	D430018F24RIK	ri|D430018F24|PX00194A14|AK084947|1989					AK084947	D430018F24Rik		ILMN_1233976	005420431	S	1552	CAGCCTCTAGTAGCATGGAGTGCACCCTTCAAAGCTAATGTTCGTTAGTG										
Mus musculus	Riken	ILMN_207023	ILMN_207023	9230119M08RIK	ri|9230119M08|PX00651N10|AK079043|430					AK079043	9230119M08Rik		ILMN_2584467	004850706	S	118	GAGTCTTGGGGCTCCGCCGAGTGCTGGCTTCTTCGCACTCACCACGGAAT										
Mus musculus	RefSeq	ILMN_185706	ILMN_185706	V1RC2	NM_053232.1	NM_053232.1		113859	16716546	NM_053232.1	V1rc2	NP_444462.1	ILMN_1224977	002450762	S	499	CCAAAGAACTACATCATCAAAGGATTGATTTTAACAGTGTCAATCTCCAG	6	+	58257789-58257838	6qB3	Mus musculus vomeronasal 1 receptor, C2 (V1rc2), mRNA.		The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]		
Mus musculus	RefSeq	ILMN_213263	ILMN_213263	SAA4	NM_011316.3	NM_011316.3		20211	141802298	NM_011316.3	Saa4	NP_035446.1	ILMN_1247506	007200392	S	1754	CGAGAAGGCACGGATGAAGACGGAGATTCTAGTCATACGGGAGCAACTGC	7	-	53983598-53983647	7qB4	Mus musculus serum amyloid A 4 (Saa4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	Saa-5; Saa-4	Saa-5; Saa-4
Mus musculus	RefSeq	ILMN_195697	ILMN_249392	4930402E16RIK	NM_198308.1	NM_198308.1		319518	38142487	NM_198308.1	4930402E16Rik	NP_938050.1	ILMN_2696146	005080343	S	2720	CTCACAAGCGTAGAAAGGACGATGTGGAGCTGAGCGACTTTCATGGGAAG	8	+	113658860-113658909	8qE1	Mus musculus RIKEN cDNA 4930402E16 gene (4930402E16Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid [goid 6546] [evidence IEA]	Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein [goid 4047] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AU018056; mKIAA1990	AU018056; mKIAA1990
Mus musculus	MEEBO	ILMN_224049	ILMN_224049	H2-M10.6	scl0399549.6_130				42475547	NM_201611	H2-M10.6		ILMN_2773723	003890458	S	1140	GTGACTGACCTTTGGTTCCAGTGAGTTGTAAATTTATTCTTCCTACTTCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	MEEBO	ILMN_184723	ILMN_184723	CBLB	scl49037.1.1_264				51830832	XM_358863	Cblb		ILMN_1235084	004920022	S	5	GGTCCATATAACTTCTTTGTACATGCCCACTCAATATTTTGTTCATCTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221542	ILMN_221542	1700093K21RIK	NM_026105.2	NM_026105.2		67358	40254497	NM_026105.2	1700093K21Rik	NP_080381.2	ILMN_2736976	001170435	S	809	TGGATCGACTGAGGGTACTGGGTCGTGTCAAGGCGGCAGGAGGATGGGAA	11	-	23416346-23416395	11qA3.2	Mus musculus RIKEN cDNA 1700093K21 gene (1700093K21Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-188K3.4	RP23-188K3.4
Mus musculus	RefSeq	ILMN_199972	ILMN_199972	LOC384130	XM_357443.1	XM_357443.1			38079365	XM_357443.1	LOC384130		ILMN_1247945	006590431	S	1	ATGGATGACAGACAGGCCAACCCTGGCAGCCGGACTTTGGCGAAGTGGGC										
Mus musculus	RefSeq	ILMN_191708	ILMN_257571	MOBP	NM_008614.2	NM_008614.2		17433	31543261	NM_008614.2	Mobp	NP_032640.1	ILMN_1223628	003520408	S	3183	CGCCCCAATGCTTTGCCTAATGTAAATCCCACGGCGGCCCCACTGATTTA	9	+	120084654-120084703	9qF4	Mus musculus myelin-associated oligodendrocytic basic protein (Mobp), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IDA]	MOBP155; R74645; MOBP69; AI839848; MOBP81; MOBP73; AI835053; MOBP170	MOBP155; R74645; MOBP69; AI839848; MOBP81; MOBP73; AI835053; MOBP170
Mus musculus	MEEBO	ILMN_185544	ILMN_185544	2610036L11RIK	scl38089.3_48				51765520	XM_488549	2610036L11Rik		ILMN_1236062	002570386	S	17	CCTTTTAAAGATGACATTACTACCCATGCCAGATCACTAAGTCAGCAGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	Riken	ILMN_207145	ILMN_207145	ACLP7	ri|F730032J06|PL00003F01|AK089453|1358					AK089453	Aclp7		ILMN_1216022	004540110	S	1256	GGAGTATAGTAGATCTAGCCATCAAAGGGGGGGGGGGAACCACATTGTTC										
Mus musculus	Riken	ILMN_205076	ILMN_205076	CASP2	ri|D430002B11|PX00193O21|AK052396|3326					AK052396	Casp2		ILMN_1228387	001850717	S	3206	AGAGAGGAGGGGACTGAGAGGCTTTCCTGGTCTTCTGAGTGTTTTGCTGC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]		
Mus musculus	Riken	ILMN_207135	ILMN_207135	F630041D06RIK	ri|F630041D06|PL00002M22|AK089219|4906					AK089219	F630041D06Rik		ILMN_1218531	004850608	S	4721	GTGTCGTTGATGACCTCGTGACCTACCACCTGCCTGAGCGGTGACTACCT										
Mus musculus	MEEBO	ILMN_208741	ILMN_208741	OLFR9	scl018373.1_221				22203794	NM_146861	Olfr9		ILMN_2769175	006420338	S	782	GGCCCCAGGCTGATTCATTTGGGAACACAGACCAGATTCTTACCTTTGGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	MEEBO	ILMN_222883	ILMN_222883	A830059I20RIK	scl32373.1.68_9	NM_021427.1			10946789	NM_021427.1	A830059I20Rik		ILMN_1234519	005900731	S	1356	GACTGCGAGGAACTCGTTCCTTTCATTATGACTACTGTGGGCTGCGTGCC										
Mus musculus	MEEBO	ILMN_220681	ILMN_220681	AURKC	scl0020871.1_53	NM_020572.1			10181113	NM_020572.1	Aurkc		ILMN_2725246	004120368	S	1087	ATAGACGCATCCGCCAGGTGGATTTTAAGTTTCCTTCATCAGTGCCTGCA						The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185980	ILMN_241230	UBE2L6	NM_019949.1	NM_019949.1		56791	9910601	NM_019949.1	Ube2l6	NP_064333.1	ILMN_2486267	006350114	S	736	TCCCCACATCCTCCTTGGCTTCAGAGCCAGTGGGAGTTAGGTACACACAG	2	+	84649533-84649582	2qD	Mus musculus ubiquitin-conjugating enzyme E2L 6 (Ube2l6), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent modification of the target protein [goid 19941] [evidence IDA]; The covalent addition to a protein of ISG15, a ubiquitin-like protein [goid 32020] [evidence IDA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IDA]; Catalysis of the covalent attachment of the ubiquitin-like protein ISG15 to other proteins [goid 42296] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	Ubce8; UBCH8; 2810489I21Rik; RIG-B; Ubcm8	Ubce8; UBCH8; 2810489I21Rik; RIG-B; Ubcm8
Mus musculus	RefSeq	ILMN_239455	ILMN_239455	GM216	NM_001033345.1	NM_001033345.1		241112	85701841	NM_001033345.1	Gm216	NP_001028517.1	ILMN_3113265	004590440	A	1725	CGACAATGATGACGATGATGTCGACAAAGTCCGAGCCAAAGTCGACAACC	1	+	74302152-74302201	1qC3	Mus musculus gene model 216, (NCBI) (Gm216), mRNA.					
Mus musculus	RefSeq	ILMN_239455	ILMN_239455	GM216	NM_001033345.1	NM_001033345.1		241112	85701841	NM_001033345.1	Gm216	NP_001028517.1	ILMN_3038912	006330209	I	560	GCTCCCTCCTAGGCTACCTAAACAACAATCTGGAGCTGATGGAACAGCAC	1	+	74296144-74296154:74296459-74296497	1qC3	Mus musculus gene model 216, (NCBI) (Gm216), mRNA.					
Mus musculus	RefSeq	ILMN_216839	ILMN_216839	FAM158A	NM_033146.1	NM_033146.1		85308	14994309	NM_033146.1	Fam158a	NP_149158.1	ILMN_1226261	004590731	S	730	CACTCAATGGAGTGGTTCCACAGATGGAAATGCCTAAGTCAGAAGGGTCC	14	-	56203576-56203592:56203720-56203752	14qC3	Mus musculus family with sequence similarity 158, member A (Fam158a), mRNA.				Cgi112	Cgi112
Mus musculus	RefSeq	ILMN_213900	ILMN_310892	LOC100046457	XR_032589.1	XR_032589.1		100046457	149264147	XR_032589.1	LOC100046457		ILMN_2642012	003800600	S	1085	CCGCAACTGGTGTCAGCGCTCAGTTTGTGCATAGAATTTTCCTAGCTCCG					PREDICTED: Mus musculus similar to Cltb protein (LOC100046457), misc RNA.					
Mus musculus	RefSeq	ILMN_189085	ILMN_226417	EG625660	XM_916570.2	XM_916570.2		625660	94400350	XM_916570.2	EG625660	XP_921663.1	ILMN_2458207	002600768	S	2266	GTAACCATAATGGCAAAAGTCCATCTCTATCTCAGGTCTCATTGACTACA				16qB3	PREDICTED: Mus musculus predicted gene, EG625660 (EG625660), mRNA.					
Mus musculus	RefSeq	ILMN_219820	ILMN_219820	MESP2	NM_008589.2	NM_008589.2		17293	111955347	NM_008589.2	Mesp2	NP_032615.2	ILMN_2713960	005700431	S	1273	GCAGGAAGACCTGGAAGGACCCCCACTGAATATTTTCTACTAATATGGCC	7	+	86957654-86957696:86957697-86957703	7qD3	Mus musculus mesoderm posterior 2 (Mesp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_217925	ILMN_217925	LOC380801	IGHV5S3_X00163_Ig_heavy_variable_5S3_6	XM_354713.1			38073792	XM_354713.1	LOC380801		ILMN_2724778	002370386	S	111	GTGTCCAGTGTGAAGTGATGCTGGTGGAGTCTGGGGGAGGCTTAGTGAAG										
Mus musculus	RefSeq	ILMN_217512	ILMN_217512	SDCBP2	NM_145535.1	NM_145535.1		228765	21704053	NM_145535.1	Sdcbp2	NP_663510.1	ILMN_2825446	000780678	S	1284	AGAGGAATGCCTTGTGTGTTGTCTTCGTCAATCTTTGTCACAGGCTATGT	2	+	151415636-151415685	2qG3	Mus musculus syndecan binding protein (syntenin) 2 (Sdcbp2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC11704	MGC11704
Mus musculus	RefSeq	ILMN_217512	ILMN_217512	SDCBP2	NM_145535.1	NM_145535.1		228765	21704053	NM_145535.1	Sdcbp2	NP_663510.1	ILMN_2684145	001850725	S	855	GCTGGAGATGTCATCACACTGACCATTATTCCCACTGTGATCTACGAGCA	2	+	151414971-151415020	2qG3	Mus musculus syndecan binding protein (syntenin) 2 (Sdcbp2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC11704	MGC11704
Mus musculus	RefSeq	ILMN_217512	ILMN_217512	SDCBP2	NM_145535.1	NM_145535.1		228765	21704053	NM_145535.1	Sdcbp2	NP_663510.1	ILMN_2686841	000940010	S	250	ATATGGGACTGTCCCTCTCTAGCCAAGAAGTTCAGAAGAACCTGACTCAG	2	+	151410578-151410627	2qG3	Mus musculus syndecan binding protein (syntenin) 2 (Sdcbp2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC11704	MGC11704
Mus musculus	RefSeq	ILMN_191497	ILMN_191497	ZFP189	NM_145547.1	NM_145547.1		230162	21704077	NM_145547.1	Zfp189	NP_663522.1	ILMN_2479585	007000703	S	2448	GGCACAGTGAAATTAGTGTACCGAATAGGGAGCAACTGATCCTGGGAAGC	4	+	49543881-49543930	4qB1	Mus musculus zinc finger protein 189 (Zfp189), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C430015I23Rik; BB131811	C430015I23Rik; BB131811
Mus musculus	MEEBO	ILMN_214076	ILMN_214076	IL1RL1L	scl36139.4_125	NM_010744.1			33468906	NM_010744.1	Il1rl1l		ILMN_1214974	007160626	S	239	CCTCAGGGTGTGCTGTTGGTCAGTGAGTCTCGAAAGGCTGATGGGGTACA										
Mus musculus	RefSeq	ILMN_219545	ILMN_219545	SLC9A3R2	NM_023055.1	NM_023055.1		65962	12746431	NM_023055.1	Slc9a3r2	NP_075542.1	ILMN_2710274	004220102	S	2021	GCACTGCAGTCTGCCTCATAAGCCATAGCGCACGCGCGCCCTCAAATTAA	17	-	24776247-24776296	17qA3.3	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 (Slc9a3r2), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	0610011L07Rik; NHERF-2; Sip-1; E3karp; 2010007A20Rik; 1200011K07Rik; Octs2; Tka-1	0610011L07Rik; NHERF-2; Sip-1; E3karp; 2010007A20Rik; 1200011K07Rik; Octs2; Tka-1
Mus musculus	RefSeq	ILMN_193013	ILMN_193013	V1RI8	NM_145846.1	NM_145846.1		252908	22003895	NM_145846.1	V1ri8	NP_665845.1	ILMN_2493354	002690209	S	16	TTCTCCTTCTACACAGGTTCCACAGTGACACACGACTCCACAATACTAAA	13	-	22237329-22237378	13qA3.1	Mus musculus vomeronasal 1 receptor, I8 (V1ri8), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223085	ILMN_223085	GSX2	NM_133256.2	NM_133256.2		14843	118130994	NM_133256.2	Gsx2	NP_573555.1	ILMN_2759177	002120181	S	1329	CTCATATATCAGGAAAAACCAGGGTTGATTAAAGTTTAACACTGTATGGG	5	+	75473582-75473631	5qC3.3	Mus musculus GS homeobox 2 (Gsx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain [goid 21798] [evidence IMP]; The process whereby in the subpallium, the developmental fate of a cell becomes restricted such that it will develop into a neuron. The subpallium is the base region of the telencephalon [goid 60163] [evidence IMP]; The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain [goid 21798] [evidence IMP]; The process whereby a neuroblast acquires specialized features of an interneuron residing in the olfactory bulb [goid 21889] [evidence IMP]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21527] [evidence IGI]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed [goid 48665] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Gsh-2; Gsh2	Gsh-2; Gsh2
Mus musculus	RefSeq	ILMN_212272	ILMN_212272	AKAP12	NM_031185.2	NM_031185.2		83397	118130742	NM_031185.2	Akap12	NP_112462.1	ILMN_2624622	002320341	S	5743	TGTGGGCTCGTAGTCCTCTGAAAGTGGTTGTTTTCCTATGCACAGTGAGC	10	-	5987475-5987524	10qA1	Mus musculus A kinase (PRKA) anchor protein (gravin) 12 (Akap12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]	Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Srcs5; Tsga12; AI317366; SSeCKS	Srcs5; Tsga12; AI317366; SSeCKS
Mus musculus	RefSeq	ILMN_186691	ILMN_212272	AKAP12	NM_031185.2	NM_031185.2		83397	118130742	NM_031185.2	Akap12	NP_112462.1	ILMN_2437686	003170209	S	315	GTCTGCCGTCAATGGTGTAGCTGAACAAGAAGATGTCCACGTCCAAGAGG	10	-	6032725-6032774	10qA1	Mus musculus A kinase (PRKA) anchor protein (gravin) 12 (Akap12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]	Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Srcs5; Tsga12; AI317366; SSeCKS	Srcs5; Tsga12; AI317366; SSeCKS
Mus musculus	Riken	ILMN_206309	ILMN_206309	D030073J21RIK	ri|D030073J21|PX00181P08|AK083736|1764					AK083736	D030073J21Rik		ILMN_1256928	004880400	S	1695	ATCTCACACACAGGCAACATGCACTCTCTCTCACACACACACACACACAC										
Mus musculus	RefSeq	ILMN_186970	ILMN_246208	PSMD1	NM_027357.2	NM_027357.2		70247	142351621	NM_027357.2	Psmd1	NP_081633.1	ILMN_2440046	004860180	S	2493	CCTTTCACACTTCCTGTCATTGGCTTATACTCCTACCTGTGTCATTGGCC	1	+	88024814-88024863	1qC5	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 (Psmd1), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Modulates the activity of an enzyme [goid 30234] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	S1; 2410026J11Rik; P112	S1; 2410026J11Rik; P112
Mus musculus	RefSeq	ILMN_193369	ILMN_246208	PSMD1	NM_027357.2	NM_027357.2		70247	142351621	NM_027357.2	Psmd1	NP_081633.1	ILMN_2496534	002680753	S	2582	CAAATTGTAAACCATCCACATTCGCATATCCTGCCCCTCTGGAAGTACCA	1	+	88027234-88027283	1qC5	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 (Psmd1), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Modulates the activity of an enzyme [goid 30234] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	S1; 2410026J11Rik; P112	S1; 2410026J11Rik; P112
Mus musculus	RefSeq	ILMN_215580	ILMN_252336	ASPHD1	NM_001039645.1	NM_001039645.1		233879	88900478	NM_001039645.1	Asphd1	NP_001034734.1	ILMN_1260082	002350520	S	379	GGGCAGAACGCCAAGCTCTCGACTTTGTCTTCGCTCCAGACCCTTGAGAG	7	-	134089611-134089614:134089615-134089660	7qF3	Mus musculus aspartate beta-hydroxylase domain containing 1 (Asphd1), mRNA.				MGC130534; A830007L07Rik; Gm168	MGC130534; A830007L07Rik; Gm168
Mus musculus	RefSeq	ILMN_221869	ILMN_221869	SLC5A3	NM_017391.2	NM_017391.2		53881	148536858	NM_017391.2	Slc5a3	NP_059087.2	ILMN_1233078	006480474	S	2338	CCCAGTGGCTTCCATGGGTCATTCAGAGGCAGAAACACCAGTAGATGCTT				16qC4	Mus musculus solute carrier family 5 (inositol transporters), member 3 (Slc5a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [evidence IMP]; The directed movement of myo-inositol into, out of, within or between cells. Myo-inositol is 1,2,3,4,5/4,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 15798] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment [goid 43576] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	Smit1	Smit1
Mus musculus	Riken	ILMN_204844	ILMN_204844	A130035O14RIK	ri|A130035O14|PX00122H19|AK037671|1567					AK037671	A130035O14Rik		ILMN_1252480	006550441	S	1235	GCCACAGGTGAGCAACACAGACACACACACCCTCCCCCAACTCCTTTGGG										
Mus musculus	RefSeq	ILMN_219970	ILMN_219970	PRG3	NM_016914.2	NM_016914.2		53856	118130834	NM_016914.2	Prg3	NP_058610.1	ILMN_2715867	005490717	S	819	GCTCCTTCTAAGATGGAGCTAGATCCTACTTGGAATCTCCTGCCTTCACA	2	+	84833913-84833923:84833924-84833962	2qD	Mus musculus proteoglycan 3 (Prg3), mRNA.		Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC129483; MBPH; MBP2; MGC129482	MGC129483; MBPH; MBP2; MGC129482
Mus musculus	MEEBO	ILMN_185192	ILMN_185192	4930448K20RIK	scl0074662.1_226				51709089	XM_487781	4930448K20Rik		ILMN_1213984	003060246	S	17	GTAAAGAGTACATACAGGAATAGGGAAATAGCTTAGTGATAGTGTTCCTG										
Mus musculus	RefSeq	ILMN_209074	ILMN_209074	ANKRD22	NM_024204.6	NM_024204.6		52024	146134984	NM_024204.6	Ankrd22	NP_077166.4	ILMN_1252032	000830291	S	1242	CAGCATGGCTTGCATGTATGGGGAGTTAGAGATCCCAGAGTAAATATTCC				19qC1	Mus musculus ankyrin repeat domain 22 (Ankrd22), mRNA.				D19Ertd675e; 5430429D21Rik	D19Ertd675e; 5430429D21Rik
Mus musculus	RefSeq	ILMN_196768	ILMN_196768	KLK1B5	NM_008456.2	NM_008456.2		16622	118130796	NM_008456.2	Klk1b5	NP_032482.1	ILMN_1224893	006480692	S	743	GCGGTAAACCCAATGTGCCAGGTATCTACACCAAACTTATTAAGTTTAAC	7	+	51475939-51475988	7qB4	Mus musculus kallikrein 1-related peptidase b5 (Klk1b5), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Klk5; mGK-5	Klk5; mGK-5
Mus musculus	RefSeq	ILMN_196768	ILMN_196768	KLK1B5	NM_008456.2	NM_008456.2		16622	118130796	NM_008456.2	Klk1b5	NP_032482.1	ILMN_2731191	002060136	S	555	CCAGTGTGTGAACTTCAAGCTCCTGCCTAATGAGGACTGTGTCAAAGCCC	7	+	51475380-51475429	7qB4	Mus musculus kallikrein 1-related peptidase b5 (Klk1b5), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Klk5; mGK-5	Klk5; mGK-5
Mus musculus	RefSeq	ILMN_196768	ILMN_196768	KLK1B5	NM_008456.2	NM_008456.2		16622	118130796	NM_008456.2	Klk1b5	NP_032482.1	ILMN_1255129	004180037	S	532	ATATACGAACCCGCAGATGATCTCCAGTGTGTGAACTTCAAGCTCCTGCC	7	+	51475263-51475266:51475361-51475406	7qB4	Mus musculus kallikrein 1-related peptidase b5 (Klk1b5), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Klk5; mGK-5	Klk5; mGK-5
Mus musculus	RefSeq	ILMN_215661	ILMN_215661	OLFR1230	NM_146789.1	NM_146789.1		258785	22129270	NM_146789.1	Olfr1230	NP_667000.1	ILMN_2662149	003460397	S	540	CCCGTTGTTGCAACTAGCCTGCATGGACACCCATATCCTAGCTCTCTTAG	2	-	89136836-89136885	2qE1	Mus musculus olfactory receptor 1230 (Olfr1230), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR237-1; MGC123493; MGC123494	MOR237-1; MGC123493; MGC123494
Mus musculus	RefSeq	ILMN_215634	ILMN_215634	CNNM4	NM_033570.1	NM_033570.1		94220	15809003	NM_033570.1	Cnnm4	NP_291048.1	ILMN_3003069	004010647	S	1986	TCGTTGCTGCACAGAGCCTCCGAAGAGGAAACCATCTGACAGGAGGGCCC	1	+	36563413-36563451:36563452-36563462	1qB	Mus musculus cyclin M4 (Cnnm4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Acdp4; 5430430O18Rik	Acdp4; 5430430O18Rik
Mus musculus	RefSeq	ILMN_248749	ILMN_248749	ZRANB2	NM_017381.1	NM_017381.1		53861	74315980	NM_017381.1	Zranb2	NP_059077.1	ILMN_2803716	005080259	S	2378	GTCGACTTTCTGAGTTGCCCAGATCTTCTAGATCCAACGTGTTAGCCTTG	3	+	157483394-157483443	3qH4	Mus musculus zinc finger, RAN-binding domain containing 2 (Zranb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AI227013; Zfp265; Zis; Znf265	AI227013; Zfp265; Zis; Znf265
Mus musculus	RefSeq	ILMN_210157	ILMN_210157	GALC	NM_008079.3	NM_008079.3		14420	93102410	NM_008079.3	Galc	NP_032105.2	ILMN_1247261	001500201	S	2053	CTGCTCGCTAGTCCACACGGGGCGTCAAGACATGATTTGGATTTTCTATT	12	-	99442111-99442150:99442151-99442160	12qE	Mus musculus galactosylceramidase (Galc), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6683] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the reaction: D-galactosyl-N-acylsphingosine + H2O = D-galactose + N-acylsphingosine [goid 4336] [evidence IMP]	A930008M05Rik; 2310068B06Rik; Gacy; twi; twitcher; AW413532; AW212969	A930008M05Rik; 2310068B06Rik; Gacy; twi; twitcher; AW413532; AW212969
Mus musculus	RefSeq	ILMN_210157	ILMN_210157	GALC	NM_008079.3	NM_008079.3		14420	93102410	NM_008079.3	Galc	NP_032105.2	ILMN_1252690	000010102	S	1443	CCCCCTCCCAGCTCGAAGCCCTTCCCAACCAACTACAAGGATGATTTCAA	12	-	99452547-99452596	12qE	Mus musculus galactosylceramidase (Galc), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6683] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the reaction: D-galactosyl-N-acylsphingosine + H2O = D-galactose + N-acylsphingosine [goid 4336] [evidence IMP]	A930008M05Rik; 2310068B06Rik; Gacy; twi; twitcher; AW413532; AW212969	A930008M05Rik; 2310068B06Rik; Gacy; twi; twitcher; AW413532; AW212969
Mus musculus	RefSeq	ILMN_210157	ILMN_210157	GALC	NM_008079.3	NM_008079.3		14420	93102410	NM_008079.3	Galc	NP_032105.2	ILMN_1244064	001410706	S	132	GCCTACGTGCTAGACGACTCCGACGGGCTGGGCCGGGAGTTCGATGGCAT	12	-	99497366-99497415	12qE	Mus musculus galactosylceramidase (Galc), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6683] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the reaction: D-galactosyl-N-acylsphingosine + H2O = D-galactose + N-acylsphingosine [goid 4336] [evidence IMP]	A930008M05Rik; 2310068B06Rik; Gacy; twi; twitcher; AW413532; AW212969	A930008M05Rik; 2310068B06Rik; Gacy; twi; twitcher; AW413532; AW212969
Mus musculus	MEEBO	ILMN_222623	ILMN_222623	ITPKA	scl20413.8.1_90	NM_146125.1			22122642	NM_146125.1	Itpka		ILMN_2752431	004390392	S	1552	CCGGGTGCCATCCACTAAGGGGGTGTAGTACATCAGGAGTTGCCTACCAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence TAS]		
Mus musculus	Riken	ILMN_205179	ILMN_205179	B230217N24RIK	ri|C230091J24|PX00177F02|AK049011|2515					AK049011	B230217N24Rik		ILMN_1253815	005290687	S	2310	GGAAGTGCAGGCGTGCTTTCCTCAATCTGCCCAGCATGTAGGATGTCGGT										
Mus musculus	RefSeq	ILMN_201164	ILMN_201164	LOC382046	XM_358696.1	XM_358696.1			38089558	XM_358696.1	LOC382046		ILMN_2541317	003140091	S	661	GCCGCTTCACCTACCTTGTTTACCGCCTTCAGCTGATATTAGGGACCACC										
Mus musculus	RefSeq	ILMN_221941	ILMN_221941	HPS3	NM_080634.3	NM_080634.3		12807	142385576	NM_080634.3	Hps3	NP_542365.2	ILMN_1229418	004540370	S	3280	GAGTCCATGAACCTTGTGCTGACCTCAATCTGTGCGAGCCTTATAGGTGC	3	-	19896596-19896645	3qA2	Mus musculus Hermansky-Pudlak syndrome 3 homolog (human) (Hps3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]		coa	coa
Mus musculus	RefSeq	ILMN_199392	ILMN_199392	OLFR541	NM_146962.1	NM_146962.1		258964	22129002	NM_146962.1	Olfr541	NP_667173.1	ILMN_1227921	004070551	S	434	CTCTGGCCGTGGGTGTGTGGTCCATCTGTGCTCTGAATGCATCTGTACAC	7	+	147890585-147890634	7qF5	Mus musculus olfactory receptor 541 (Olfr541), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR253-3	MOR253-3
Mus musculus	RefSeq	ILMN_199392	ILMN_199392	OLFR541	NM_146962.1	NM_146962.1		258964	22129002	NM_146962.1	Olfr541	NP_667173.1	ILMN_2654627	006940152	S	607	TGGCAGATGCCTTTTATGGAGGCATCAACTTCGTGCTAACACTGTTGTCC	7	+	147890758-147890807	7qF5	Mus musculus olfactory receptor 541 (Olfr541), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR253-3	MOR253-3
Mus musculus	RefSeq	ILMN_199392	ILMN_199392	OLFR541	NM_146962.1	NM_146962.1		258964	22129002	NM_146962.1	Olfr541	NP_667173.1	ILMN_2804936	004260458	S	638	TCGTGCTAACACTGTTGTCCTATGGCTACATCATTGGCAGCATCCTGCGC	7	+	147890789-147890838	7qF5	Mus musculus olfactory receptor 541 (Olfr541), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR253-3	MOR253-3
Mus musculus	MEEBO	ILMN_223727	ILMN_223727	MYL7	scl017898.5_1	NM_022879.1			12584965	NM_022879.1	Myl7		ILMN_2768252	001010201	S	146	TGACCAGAACAGGGATGGGATCATCTGCAAATCAGACCTGAAGGAGACCT						A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199517	ILMN_199517	LOC382652	XM_356612.1	XM_356612.1			38073883	XM_356612.1	LOC382652		ILMN_2535506	004250035	S	77	TTGTCTCCCTCATTGGCATTGGCGTCAAGGATGATGAAGTTCGAGGACAC										
Mus musculus	RefSeq	ILMN_197098	ILMN_197098	LOC380826	XM_358435.1	XM_358435.1			38074074	XM_358435.1	LOC380826		ILMN_1234518	004150253	S	617	CACGGTGTTGCGGCACTGGGCCGTGCGCGTGTGGTGAAGCTAGAGGCCAT										
Mus musculus	MEEBO	ILMN_221574	ILMN_221574	1500001L15RIK	scl46290.12.1_1	XM_127738.3			28479477	XM_127738.3	1500001L15Rik		ILMN_2737374	004900520	S	988	AGGCGCTGGTGATGTGGTGCGCTTACACGTGTACTTTTGGTCATCCTGGG										
Mus musculus	Riken	ILMN_205855	ILMN_205855	SYN2	ri|A830010H21|PX00153P04|AK043584|2372					AK043584	Syn2		ILMN_1216744	004050376	S	1982	CCAGCACAGAAGCCCCAGCCTCACCCACAGCTCAAGTAAGATAACCCAGC						A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence TAS]		
Mus musculus	RefSeq	ILMN_214364	ILMN_256576	CPSF4L	NM_026682.1	NM_026682.1		52670	21536223	NM_026682.1	Cpsf4l	NP_080958.1	ILMN_2647225	000160209	S	1089	GCTATGGGTCAACGGCCTCAAGTGCTCCCAAAAACGGGCAATCCGATCCA	11	-	113559560-113559609	11qE2	Mus musculus cleavage and polyadenylation specific factor 4-like (Cpsf4l), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RP23-407I21.8; 1500000C01Rik; 0610010C04Rik	RP23-407I21.8; 1500000C01Rik; 0610010C04Rik
Mus musculus	RefSeq	ILMN_197461	ILMN_197461	LOC218993	XM_147836.2	XM_147836.2			38076072	XM_147836.2	LOC218993		ILMN_2528210	006980369	S	655	GGGCAACGTCAACATGAAAATGATCCGAGCCTGGCCGATGACTGCATAGG										
Mus musculus	RefSeq	ILMN_208902	ILMN_323519	4930528H21RIK	XM_001474660.1	XM_001474660.1		78034	149254848	XM_001474660.1	4930528H21Rik	XP_001474710.1	ILMN_1233493	005080332	S	312	ACATCATCTGTCGGCGACATCCATGGCCTGAAGTACTTGAACGGACAAAG	6	-	3981973-3982022	6qA1	PREDICTED: Mus musculus RIKEN cDNA 4930528H21 gene (4930528H21Rik), mRNA.					
Mus musculus	Riken	ILMN_206049	ILMN_206049	D230004K06RIK	ri|D230004K06|PX00187F12|AK051814|1762					AK051814	D230004K06Rik		ILMN_1245327	001090176	S	1116	CTTCAGTAAAGCCAGCATTTGGCAGGGGTTCTACCAGAGCCGACGAAGCC										
Mus musculus	Riken	ILMN_203921	ILMN_203921	9830169C09RIK	ri|9830169C09|PX00119K14|AK036738|4191					AK036738	9830169C09Rik		ILMN_1235240	001990047	S	3866	GCCTAGGAAACCCCCGAGTTTTGAAACTAGAACCCGGAGCAGTGATTCCC										
Mus musculus	RefSeq	ILMN_197566	ILMN_247717	GM412	XM_889797.1	XM_889797.1		208424	82890075	XM_889797.1	Gm412	XP_894890.1	ILMN_1242139	002750192	S	938	GCTGCCTCAATCCAGTCCTGTACTTCTTGTCACAGGGCAACAACAGAGCC	3	-	67423723-67423772	3qE1	PREDICTED: Mus musculus gene model 412, (NCBI) (Gm412), mRNA.					
Mus musculus	RefSeq	ILMN_189844	ILMN_254611	SYNCRIP	NM_019666.2	NM_019666.2		56403	114145492	NM_019666.2	Syncrip	NP_062640.2	ILMN_2634248	004150685	S	2047	CGCAAAGCTGATGGGTACAACCAGCCAGATACCAAGCGGCGCCAGACCAA	9	-	88351105-88351154	9qE3.1	Mus musculus synaptotagmin binding, cytoplasmic RNA interacting protein (Syncrip), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence IDA]	Nsap1; pp68; Nsap1l; 4632417O19Rik; GRY-RBP; 2610109K23Rik	Nsap1; pp68; Nsap1l; 4632417O19Rik; GRY-RBP; 2610109K23Rik
Mus musculus	RefSeq	ILMN_189844	ILMN_254611	SYNCRIP	NM_019666.2	NM_019666.2		56403	114145492	NM_019666.2	Syncrip	NP_062640.2	ILMN_2595017	006200181	S	438	GACATTGCTTGATGCTGGTTTACCACAGAAAGTTGCTGAAAAACTAGATG	9	-	88375458-88375507	9qE3.1	Mus musculus synaptotagmin binding, cytoplasmic RNA interacting protein (Syncrip), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence IDA]	Nsap1; pp68; Nsap1l; 4632417O19Rik; GRY-RBP; 2610109K23Rik	Nsap1; pp68; Nsap1l; 4632417O19Rik; GRY-RBP; 2610109K23Rik
Mus musculus	Riken	ILMN_204347	ILMN_204347	A930011E24RIK	ri|A930011E24|PX00066I05|AK044408|2253					AK044408	A930011E24Rik		ILMN_1251951	002480626	S	2107	GCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTTTA										
Mus musculus	Riken	ILMN_205812	ILMN_205812	A330086O21RIK	ri|A330086O21|PX00133C14|AK039686|2347					AK039686	A330086O21Rik		ILMN_1220048	006590619	S	2146	AGGTGCTGGCTGGTAACTCAGATGGACTGCGTGTGGGAAAGAGAAGCTGG										
Mus musculus	RefSeq	ILMN_249613	ILMN_249613	HIST1H3H	NM_178206.2	NM_178206.2		319152	75991705	NM_178206.2	Hist1h3h	NP_835513.1	ILMN_2860616	007610152	S	415	CCGCCGCATCCGCGGGGAGAGGGCTTAAAGTTCGTCTTTCTGTGTTTTTC	13	+	21809911-21809938:21809939-21809960	13qA3.1	Mus musculus histone cluster 1, H3h (Hist1h3h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H3-291	H3-291
Mus musculus	RefSeq	ILMN_218646	ILMN_249613	HIST1H3H	NM_178206.2	NM_178206.2		319152	75991705	NM_178206.2	Hist1h3h	NP_835513.1	ILMN_2698519	005690561	S	302	ATGGCTCTGCAGGAGGCCTGTGAGGCCTACCTCGTGGGTCTGTTTGAGGA	13	+	21809798-21809847	13qA3.1	Mus musculus histone cluster 1, H3h (Hist1h3h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H3-291	H3-291
Mus musculus	RefSeq	ILMN_209071	ILMN_249613	HIST1H3H	NM_178206.2	NM_178206.2		319152	75991705	NM_178206.2	Hist1h3h	NP_835513.1	ILMN_2592253	001230338	S	356	AACCTGTGCGCCATCCACGCCAAGCGTGTCACCATCATGCCCAAGGACAT	13	+	21809852-21809901	13qA3.1	Mus musculus histone cluster 1, H3h (Hist1h3h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H3-291	H3-291
Mus musculus	RefSeq	ILMN_193497	ILMN_235292	MTAP9	NM_001081230.1	NM_001081230.1		213582	124486996	NM_001081230.1	Mtap9	NP_001074699.1	ILMN_2497745	005670259	S	5984	CTCTCCGCGATGACTGCGTGCGGTTAATGCGGTATTTCCACTCACCTGTC	3	+	82198956-82199005	3qE3	Mus musculus microtubule-associated protein 9 (Mtap9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		5330427D05Rik; 5033421J10Rik	5330427D05Rik; 5033421J10Rik
Mus musculus	RefSeq	ILMN_218394	ILMN_235292	MTAP9	NM_001081230.1	NM_001081230.1		213582	124486996	NM_001081230.1	Mtap9	NP_001074699.1	ILMN_2695262	001230221	S	1327	CACGAAGAATAAAAAGACAACGAATAACAGAGTGTCCAGTGCCTCTGGCA	3	+	82182879-82182928	3qE3	Mus musculus microtubule-associated protein 9 (Mtap9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		5330427D05Rik; 5033421J10Rik	5330427D05Rik; 5033421J10Rik
Mus musculus	RefSeq	ILMN_203769	ILMN_235292	MTAP9	NM_001081230.1	NM_001081230.1		213582	124486996	NM_001081230.1	Mtap9	NP_001074699.1	ILMN_1255854	004250767	S	1132	GGTGAACTGTGTTACTCCTGAACTCGAGCAGCCCAAGGACGGTCAGGTGG	3	+	82180915-82180964	3qE3	Mus musculus microtubule-associated protein 9 (Mtap9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		5330427D05Rik; 5033421J10Rik	5330427D05Rik; 5033421J10Rik
Mus musculus	RefSeq	ILMN_235292	ILMN_235292	MTAP9	NM_001081230.1	NM_001081230.1		213582	124486996	NM_001081230.1	Mtap9	NP_001074699.1	ILMN_2827921	002000021	S	508	AAAAAATTCTCCAAGACTGTCTTTTTTGAAAACCAAGAAAGTAAACAGGG	3	+	82167301-82167350	3qE3	Mus musculus microtubule-associated protein 9 (Mtap9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		5330427D05Rik; 5033421J10Rik	5330427D05Rik; 5033421J10Rik
Mus musculus	RefSeq	ILMN_212738	ILMN_212738	TMTC1	NM_198967.1	NM_198967.1		387314	39725720	NM_198967.1	Tmtc1	NP_945318.1	ILMN_2810955	000130750	S	3564	CTGTATTCCAGGTTTCACTAGTGTTGTGTCTCCACTCTGAGCCTTCTGAG	6	-	148194218-148194267	6qG3	Mus musculus transmembrane and tetratricopeptide repeat containing 1 (Tmtc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BC023818; Arg99	BC023818; Arg99
Mus musculus	RefSeq	ILMN_192469	ILMN_251758	SKI	NM_011385.2	NM_011385.2		20481	113205054	NM_011385.2	Ski	NP_035515.2	ILMN_2488360	001570451	S	5005	CCATGTGGTGGCCTCCATGGCACCCACTCTCCCAGTTCCTATGCAGGTTA	4	-	154528594-154528643	4qE2	Mus musculus ski sarcoma viral oncogene homolog (avian) (Ski), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IDA]	The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA062172; BC004088; 2610001A11Rik; AA589460; MGC8300; 2310012I02Rik	AA062172; BC004088; 2610001A11Rik; AA589460; MGC8300; 2310012I02Rik
Mus musculus	RefSeq	ILMN_221448	ILMN_221448	FAM152B	NM_134095.2	NM_134095.2		28075	40254103	NM_134095.2	Fam152b	NP_598856.1	ILMN_2794686	005890544	S	2751	CAAGGGAGGTGGAGGCATGAGACCCTTGTCCGCTCCTAGACTGAAGGGTT	15	-	81823063-81823112	15qE1	Mus musculus family with sequence similarity 152, member B (Fam152b), mRNA.				AI427858; AI850401	AI427858; AI850401
Mus musculus	RefSeq	ILMN_220298	ILMN_220298	S100A16	NM_026416.2	NM_026416.2		67860	31982650	NM_026416.2	S100a16	NP_080692.1	ILMN_1220521	001300037	S	612	CTGAACAGCACAAGATGGGTGGGTCGGGGGCTATCAAGGCCACTGTGGTA	3	+	90346624-90346673	3qF1	Mus musculus S100 calcium binding protein A16 (S100a16), mRNA.				DT1P1A7; S100F; AI663996; AI325039; 2300002L21Rik	DT1P1A7; S100F; AI663996; AI325039; 2300002L21Rik
Mus musculus	RefSeq	ILMN_192686	ILMN_259772	PREI4	NM_001042671.1	NM_001042671.1		74182	111185944	NM_001042671.1	Prei4	NP_001036136.1	ILMN_2601884	007100608	S	2960	GATTGTACATGTTTACTGTTAAGTCCTTGCATCTGGTGCTAGGTGAGGGA	2	-	132355512-132355561	2qF2	Mus musculus preimplantation protein 4 (Prei4), transcript variant 3, mRNA.		The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	2310032D16Rik; mKIAA1434; AU015213; 2310004G06Rik	2310032D16Rik; mKIAA1434; AU015213; 2310004G06Rik
Mus musculus	RefSeq	ILMN_259772	ILMN_259772	PREI4	NM_001042671.1	NM_001042671.1		74182	111185944	NM_001042671.1	Prei4	NP_001036136.1	ILMN_3143633	003290068	A	1963	CTGCTGGGGTGATGATACCAACGATCCTGAAAACAGAAGGAAACTGAAGG	2	-	132359840-132359889	2qF2	Mus musculus preimplantation protein 4 (Prei4), transcript variant 3, mRNA.		The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	2310032D16Rik; mKIAA1434; AU015213; 2310004G06Rik	2310032D16Rik; mKIAA1434; AU015213; 2310004G06Rik
Mus musculus	Riken	ILMN_205230	ILMN_205230	5133400O11RIK	ri|E230024E11|PX00209H23|AK054158|1636					AK054158	5133400O11Rik		ILMN_1253243	004730156	S	755	ACTAATGGCCTGGAGATGACTCCAGACCCCAGTTGCAGGAGACCTTCAAG										
Mus musculus	RefSeq	ILMN_218474	ILMN_218474	CD209D	NM_130904.2	NM_130904.2		170779	24475791	NM_130904.2	Cd209d	NP_570974.1	ILMN_2696291	006250497	S	677	CTACTTTTCTGGATCTGTAAGAAAGTTTCAACCTCATCATGCACCACCAA	8	-	3871960-3872009	8qA1.1	Mus musculus CD209d antigen (Cd209d), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	SIGN-R3; SIGNR3; mSIGNR3	SIGN-R3; SIGNR3; mSIGNR3
Mus musculus	MEEBO	ILMN_214864	ILMN_214864	A230059G12RIK	scl19186.1.1122_174	NM_177037.2			31342654	NM_177037.2	A230059G12Rik		ILMN_2652834	004540397	S	2448	AGAGTTGAGCAAGGAGTGTCTCCTTAAGGTAGAAAAATGGCCCCAAAGGA										
Mus musculus	RefSeq	ILMN_190448	ILMN_314072	TNIK	XM_001474897.1	XM_001474897.1		665113	149250916	XM_001474897.1	Tnik	XP_001474947.1	ILMN_2524251	004060626	S	6749	GCCACCAGCTCTTTATATTGCTGCTGTGATGTTTTGAACCTGAGGCTTCC				3qA3	PREDICTED: Mus musculus TRAF2 and NCK interacting kinase, transcript variant 1 (Tnik), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220321	ILMN_220321	RAB30	NM_029494.2	NM_029494.2		75985	31560777	NM_029494.2	Rab30	NP_083770.2	ILMN_2720555	000130326	S	1694	GCAGATATGACCAAAATACTGTGGACTATGGACTGACTGCAGGGCAGACT	7	+	99985394-99985443	7qE1	Mus musculus RAB30, member RAS oncogene family (Rab30), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rsb30; 5033421K01Rik; AI323892	Rsb30; 5033421K01Rik; AI323892
Mus musculus	RefSeq	ILMN_223358	ILMN_223358	AVEN	NM_028844.2	NM_028844.2		74268	142375726	NM_028844.2	Aven	NP_083120.1	ILMN_1241068	006100136	S	268	GACAGCGATTCAGAGACCTATGGAGAAGAGAATGATGAGCAAGGAAATTT	2	+	112354616-112354665	2qE3	Mus musculus apoptosis, caspase activation inhibitor (Aven), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	MGC124011; mAven-L; 1700056A21Rik; 1700013A01Rik; mAven-S	MGC124011; mAven-L; 1700056A21Rik; 1700013A01Rik; mAven-S
Mus musculus	RefSeq	ILMN_212768	ILMN_212768	MYO7A	NM_008663.2	NM_008663.2		17921	115511009	NM_008663.2	Myo7a	NP_032689.2	ILMN_1251839	000830730	S	6653	CACCATTGGGAACTTGGTCCGTGGGAGCAAACTGCTCTGTGAGACATCGC	7	-	105200706-105200755	7qE2	Mus musculus myosin VIIa (Myo7a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence ISA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IMP]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The directed movement of pigment granules into, out of, within or between cells [goid 51904] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The directed movement of pigment granules into, out of, within or between cells [goid 51904] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process by which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome [goid 1845] [evidence IMP]; Any process by which a pigment granule is transported to, and/or maintained in, a specific location within the cell [goid 51875] [evidence IMP]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	USH1B; sh-1; sh1; nmf371; Myo7	USH1B; sh-1; sh1; nmf371; Myo7
Mus musculus	Riken	ILMN_206462	ILMN_206462	D230005H23RIK	ri|D230005H23|PX00187P04|AK084178|2051					AK084178	D230005H23Rik		ILMN_1230178	006480364	S	1813	CAGGGACACTCAGTATTGCACCCTGCCCAACTCACTGGAATCTCTGTGGG										
Mus musculus	RefSeq	ILMN_208684	ILMN_208684	ZFP715	NM_027264.3	NM_027264.3		69930	123173817	NM_027264.3	Zfp715	NP_081540.3	ILMN_2895084	003400600	S	3679	CCCCATTTGTTGTGGGAGTCCAGTAAAACCCTTAAGTGCCAGCCATGTAA	7	-	50552354-50552403	7qB4	Mus musculus zinc finger protein 715 (Zfp715), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2610041B18Rik; mszf15	2610041B18Rik; mszf15
Mus musculus	RefSeq	ILMN_199929	ILMN_199929	LOC384083	XM_357409.1	XM_357409.1			38079019	XM_357409.1	LOC384083		ILMN_1235468	006650138	S	505	ATTCCAGCTCAGGGTCGCGGGACAGGGGGGTCAAATGTCAGGTTCAGCGT										
Mus musculus	RefSeq	ILMN_208769	ILMN_208769	SNPH	NM_198214.2	NM_198214.2		241727	118130824	NM_198214.2	Snph	NP_937857.1	ILMN_1234340	004760184	S	4517	GGCCACTGCGCACTCATATTAGGCTATCCTCTTGACAGGAACTTCAGGGG	2	-	151416408-151416457	2qG3	Mus musculus syntaphilin (Snph), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	AW556958; AW045671; 6430515A01; mKIAA0374; AW743098	AW556958; AW045671; 6430515A01; mKIAA0374; AW743098
Mus musculus	RefSeq	ILMN_201083	ILMN_201083	LOC381992	XM_356051.1	XM_356051.1			38088942	XM_356051.1	LOC381992		ILMN_2541019	001440246	S	253	GGGAAAAAGTGGTGTTCACTCACCCCAAATTACAACAAAGACCAAGTTTG										
Mus musculus	Riken	ILMN_204697	ILMN_204697	NSMAF	ri|A430026P21|PX00135G16|AK039902|931					AK039902	Nsmaf		ILMN_1225789	006510019	S	660	CCTGTAGCTGCGAGGAGCAAGGCTGTAGGAGCAGGCATCAGACTTTTCCT								Interacting selectively with a death receptor [goid 5123] [evidence TAS]		
Mus musculus	RefSeq	ILMN_219828	ILMN_219828	4732456N10RIK	NM_177717.3	NM_177717.3		239673	142351592	NM_177717.3	4732456N10Rik	NP_808385.1	ILMN_1250860	006620427	S	2385	CTTCCCAAAGGCAGTTGGTCCGTCGTCTGCTGTGCCGTGTGAACAGAAAG	15	-	101382886-101382935	15qF2	Mus musculus RIKEN cDNA 4732456N10 gene (4732456N10Rik), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_214329	ILMN_245833	NLRP9C	NM_001042612.1	NM_001042612.1		330490	110815823	NM_001042612.1	Nlrp9c	NP_001036077.1	ILMN_2646906	007050202	S	2796	GCCTTGCATCACTCTGGGCTGGTGATGCTCTGTGAGGCTCTGAACCACAA	7	-	27156333-27156382	7qA3	Mus musculus NLR family, pyrin domain containing 9C (Nlrp9c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Nalp9c; Nalp-zeta; AA636537; BB062542	Nalp9c; Nalp-zeta; AA636537; BB062542
Mus musculus	RefSeq	ILMN_214188	ILMN_214188	SPSB3	NM_027141.1	NM_027141.1		79043	18252773	NM_027141.1	Spsb3	NP_081417.1	ILMN_2994108	004640270	S	1501	CCGTGGGGCTTTCCTGACTTGCACTGCATGTTGTCAGCTCCTGCTGCAGA	17	+	25027854-25027903	17qA3.3	Mus musculus splA/ryanodine receptor domain and SOCS box containing 3 (Spsb3), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		SSB3; mKIAA4204; KIAA4204; Tce1; 3300001M01Rik; 2310012N15Rik	SSB3; mKIAA4204; KIAA4204; Tce1; 3300001M01Rik; 2310012N15Rik
Mus musculus	RefSeq	ILMN_214188	ILMN_214188	SPSB3	NM_027141.1	NM_027141.1		79043	18252773	NM_027141.1	Spsb3	NP_081417.1	ILMN_2645276	003520403	S	954	GTACCTGTGCTGCTACCGCTTGCGCCAACTGCGGCCAAATTCAGGGGACA	17	+	25027446-25027495	17qA3.3	Mus musculus splA/ryanodine receptor domain and SOCS box containing 3 (Spsb3), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		SSB3; mKIAA4204; KIAA4204; Tce1; 3300001M01Rik; 2310012N15Rik	SSB3; mKIAA4204; KIAA4204; Tce1; 3300001M01Rik; 2310012N15Rik
Mus musculus	RefSeq	Actb	ILMN_207561	ACTB	NM_007393.3	NM_007393.3		11461	145966868	NM_007393.3	Actb	NP_031419.1	ILMN_1377923	004640114	S	1610	TCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGGTGACAGCATTGCTTCT				5qG2	Mus musculus actin, beta (Actb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Actx; E430023M04Rik; beta-actin	Actx; E430023M04Rik; beta-actin
Mus musculus	RefSeq	ILMN_207561	ILMN_207561	ACTB	NM_007393.3	NM_007393.3		11461	145966868	NM_007393.3	Actb	NP_031419.1	ILMN_2698799	001170372	S	1173	CCGGCCCCTCCATCGTGCACCGCAAGTGCTTCTAGGCGGACTGTTACTGA				5qG2	Mus musculus actin, beta (Actb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Actx; E430023M04Rik; beta-actin	Actx; E430023M04Rik; beta-actin
Mus musculus	RefSeq	Actb	ILMN_207561	ACTB	NM_007393.3	NM_007393.3		11461	145966868	NM_007393.3	Actb	NP_031419.1	ILMN_2588055	002680722	S	1408	CGGTGAAGGCGACAGCAGTTGGTTGGAGCAAACATCCCCCAAAGTTCTAC				5qG2	Mus musculus actin, beta (Actb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Actx; E430023M04Rik; beta-actin	Actx; E430023M04Rik; beta-actin
Mus musculus	RefSeq	ILMN_218487	ILMN_218487	AARD	NM_175503.3	NM_175503.3		239435	118150647	NM_175503.3	Aard	NP_780712.2	ILMN_1237572	002710324	S	1029	TGTGTCTAGATTCCACCCATACCCTCGATGTGGCCAGCGAGAAGGGCTTC	15	+	51876949-51876998	15qC	Mus musculus alanine and arginine rich domain containing protein (Aard), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AV328152; A5D3; MGC107188	AV328152; A5D3; MGC107188
Mus musculus	MEEBO	ILMN_185651	ILMN_185651	MTDNA_ND4	mtDNA_ND4						mtDNA_ND4		ILMN_2428846	000240367	S	18	CCACAGCCGTACTATAATCATGGCCCGAGGACTTCAAATGGTCTTCCCAC										
Mus musculus	Riken	ILMN_206635	ILMN_206635	4930402I24RIK	ri|4930402I24|PX00313J10|AK076652|684					AK076652	4930402I24Rik		ILMN_1256680	007400162	S	404	GCCGTGGAACCAGTTTCAGCAGATCAAGAGAAGATGTGTCTTGGGCATGG										
Mus musculus	RefSeq	ILMN_220698	ILMN_256858	AKIRIN1	NM_023423.3	NM_023423.3		68050	71892472	NM_023423.3	Akirin1	NP_075912.2	ILMN_1239720	002690541	S	1769	GCTGTGAGCAGAAAGCAGCCTCTGTTTTGAGGAGGTGGGATTTAAGTATA	4	-	123412989-123413038	4qD2.2	Mus musculus akirin 1 (Akirin1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]				
Mus musculus	Riken	ILMN_203510	ILMN_203510	VIM	ri|8030453F01|PX00103N05|AK033175|2926					AK033175	Vim		ILMN_1232980	002470221	S	2669	TGTGACAGCTGGGACAGGCAGAAATACCCTATAGGCTGAGCCAGGGTGTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; A type of intermediate filament, typically made up of one or more of the proteins vimentin, desmin, glial fibrillary acidic protein (GFAP), and peripherin. Unlike the keratins, the type III proteins can form both homo- and heteropolymeric IF filaments [goid 45098] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISO]	Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins [goid 45103] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IMP]		
Mus musculus	RefSeq	ILMN_192730	ILMN_251810	MICALL2	NM_174850.2	NM_174850.2		231830	31341298	NM_174850.2	Micall2	NP_777275.1	ILMN_2711772	006650349	S	2969	CTTCTTGTCCAAGATCTGGTCCTCGAAGAGCAAAAGCGGGCAGGCCTGAG	5	-	140182788-140182789:140182790-140182837	5qG2	Mus musculus MICAL-like 2 (Micall2), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A long bundle of actin filaments, comprising filamentous actin and associated proteins, found in cells [goid 30482] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	JRAB; MICAL-L2; A930021H16Rik; FLJ00139; mFLJ00139	JRAB; MICAL-L2; A930021H16Rik; FLJ00139; mFLJ00139
Mus musculus	RefSeq	ILMN_192730	ILMN_251810	MICALL2	NM_174850.2	NM_174850.2		231830	31341298	NM_174850.2	Micall2	NP_777275.1	ILMN_2710755	002630114	S	631	GTAAACAGTGCTCCAGCACGCTGCACTCGGGGGCCTACCGTGCCACGGGA	5	-	140192747-140192796	5qG2	Mus musculus MICAL-like 2 (Micall2), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A long bundle of actin filaments, comprising filamentous actin and associated proteins, found in cells [goid 30482] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	JRAB; MICAL-L2; A930021H16Rik; FLJ00139; mFLJ00139	JRAB; MICAL-L2; A930021H16Rik; FLJ00139; mFLJ00139
Mus musculus	RefSeq	ILMN_251810	ILMN_251810	MICALL2	NM_174850.2	NM_174850.2		231830	31341298	NM_174850.2	Micall2	NP_777275.1	ILMN_2793260	001450056	S	2877	CTGGATGAGGATCGGCTCCGGGAACAGGAAGAGGACCAAATGCTGGAGAA	5	-	140183032-140183062:140184840-140184858	5qG2	Mus musculus MICAL-like 2 (Micall2), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A long bundle of actin filaments, comprising filamentous actin and associated proteins, found in cells [goid 30482] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	JRAB; MICAL-L2; A930021H16Rik; FLJ00139; mFLJ00139	JRAB; MICAL-L2; A930021H16Rik; FLJ00139; mFLJ00139
Mus musculus	MEEBO	ILMN_190513	ILMN_190513	MJ-5000-151_3293	MJ-5000-151_3293						MJ-5000-151_3293		ILMN_2470806	002510544	S	3	TCCGCTATAGCAGAGCTCTTAGCAAAGACAGTAACAGCATCAGCCTCTCC										
Mus musculus	Riken	ILMN_204855	ILMN_204855	A130072N13RIK	ri|A130072N13|PX00124H01|AK038032|996					AK038032	A130072N13Rik		ILMN_1229292	003450431	S	719	CCGAGTTCAGTCCCTGAGACCCACTTGGTAGAAGGAGAGTACCAGCTCTG										
Mus musculus	RefSeq	ILMN_191646	ILMN_245841	ATF2	NM_001025093.1	NM_001025093.1		11909	68799915	NM_001025093.1	Atf2	NP_001020264.1	ILMN_2480916	007510048	S	4178	TTTTGAGTCCTTATATTTGCAATGTTACACAAACTGTACTATTTTCTTTT	2	-	73654627-73654676	2qC3	Mus musculus activating transcription factor 2 (Atf2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Creb2; D130078H02Rik; MGC105222; MGC105211; Atf-2; mXBP; CRE-BP; D18875	Creb2; D130078H02Rik; MGC105222; MGC105211; Atf-2; mXBP; CRE-BP; D18875
Mus musculus	RefSeq	ILMN_245841	ILMN_245841	ATF2	NM_001025093.1	NM_001025093.1		11909	68799915	NM_001025093.1	Atf2	NP_001020264.1	ILMN_3078995	000110427	I	485	GCTGTCCATAAACATAAACATGAGATGACACTGAAATTTGGTCCAGCACG	2	-	73691874-73691923	2qC3	Mus musculus activating transcription factor 2 (Atf2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Creb2; D130078H02Rik; MGC105222; MGC105211; Atf-2; mXBP; CRE-BP; D18875	Creb2; D130078H02Rik; MGC105222; MGC105211; Atf-2; mXBP; CRE-BP; D18875
Mus musculus	RefSeq	ILMN_245841	ILMN_245841	ATF2	NM_001025093.1	NM_001025093.1		11909	68799915	NM_001025093.1	Atf2	NP_001020264.1	ILMN_3158265	005260553	A	4019	AGATGTGAGAAGTCATGTGACGGGGAATGACCTTCCACGGTGGACAGCGC	2	-	73654786-73654835	2qC3	Mus musculus activating transcription factor 2 (Atf2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Creb2; D130078H02Rik; MGC105222; MGC105211; Atf-2; mXBP; CRE-BP; D18875	Creb2; D130078H02Rik; MGC105222; MGC105211; Atf-2; mXBP; CRE-BP; D18875
Mus musculus	MEEBO	ILMN_211234	ILMN_211234	CLPX	scl36809.14.1_41	NM_011802.1			6753453	NM_011802.1	Clpx		ILMN_2613869	006100743	S	2111	CTGTTCTTTAGGGTCATAACAGTTTCCGCAGTCTGGCATTAAAGGCATTG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	Riken	ILMN_202280	ILMN_202280	1200015P04RIK	ri|1200015P04|R000009L21|AK004798|1022					AK004798	1200015P04Rik		ILMN_2548361	000020497	S	628	AAGATAACAGAACAGGCAGGGGAACACCTCCTGAGTTCCCCCCCCCGGCC										
Mus musculus	MEEBO	ILMN_191303	ILMN_191303	SCL0001464.1_61	scl0001464.1_61	AK005333.1			12837808	AK005333.1	scl0001464.1_61		ILMN_2477946	002490010	S	16	CAGTGACCACACTGAAGTTTCTCTGTCGAGGGGGAAGGGGAGTAAGGCAG										
Mus musculus	RefSeq	ILMN_192504	ILMN_231841	COX5B	NM_009942.2	NM_009942.2		12859	112807194	NM_009942.2	Cox5b	NP_034072.2	ILMN_2772319	003830068	S	106	TTCAAGGTTACTTCGCGGAGTGGGCGCTTTGGCGGCGCAGGCCCTGAGGG	1	+	36748437-36748486	1qB	Mus musculus cytochrome c oxidase, subunit Vb (Cox5b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]	MGC117683	MGC117683
Mus musculus	RefSeq	ILMN_219161	ILMN_219161	WIPF2	NM_197940.1	NM_197940.1		68524	37537555	NM_197940.1	Wipf2	NP_922922.1	ILMN_1223848	001240040	S	5030	TAGGGAATGAGAGGGGAGAGAGGAGGCCATTAGGAGTCTGCCTTCAAGAC	11	+	98764544-98764593	11qD	Mus musculus WAS/WASL interacting protein family, member 2 (Wipf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Wire; Wich; 1110014J05Rik; Gm1176; 5730509C05Rik; AA407487	Wire; Wich; 1110014J05Rik; Gm1176; 5730509C05Rik; AA407487
Mus musculus	RefSeq	ILMN_218492	ILMN_218492	NFAM1	NM_028728.2	NM_028728.2		74039	142377426	NM_028728.2	Nfam1	NP_083004.1	ILMN_1248347	003190768	S	2567	GGCTGGGACTGAGGTTTCTTTTAACCCTTTTCAGGGGAGTGAGGGAAGCC	15	-	82828368-82828417	15qE1	Mus musculus Nfat activating molecule with ITAM motif 1 (Nfam1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Any process that modulates the frequency, rate or extent of B cell differentiation [goid 45577] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell [goid 50861] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51091] [evidence ISS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4921501M20Rik	4921501M20Rik
Mus musculus	RefSeq	ILMN_200204	ILMN_200204	LOC385935	XM_359005.1	XM_359005.1			38080900	XM_359005.1	LOC385935		ILMN_2537941	001470458	S	143	TTTTATACTCTCATCCACGCACAGCAGGCCATGCCGCCTCACCAGGCATG										
Mus musculus	RefSeq	ILMN_199486	ILMN_259538	4930403N07RIK	XM_916831.3	XM_916831.3		73936	149263201	XM_916831.3	4930403N07Rik	XP_921924.3	ILMN_1219105	003710747	S	2248	GCAGTACAGGGATGAGAAAATTGAGTCCATCAGCACCTGGCTCGTGGGGG				12qC3	PREDICTED: Mus musculus RIKEN cDNA 4930403N07 gene (4930403N07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221854	ILMN_221854	FAP	NM_007986.2	NM_007986.2		14089	118131069	NM_007986.2	Fap	NP_032012.1	ILMN_1238305	002190128	S	2521	TATTGTAAAAGCCGCTAAAAATTTAGGAGGGCTCAGGAGGTTAGGCTCGG	2	-	62339126-62339175	2qC1.3	Mus musculus fibroblast activation protein (Fap), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217835	ILMN_217835	OLFR1330	NM_146334.1	NM_146334.1		258331	22129631	NM_146334.1	Olfr1330	NP_666446.1	ILMN_1250973	003370100	S	424	GGCCTCTGCATACATTTGACAGCAGGGTCTTGGGTCTGTGGTTTATTCTC	4	+	118566113-118566162	4qD2.1	Mus musculus olfactory receptor 1330 (Olfr1330), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR259-8; MGC123702	MOR259-8; MGC123702
Mus musculus	RefSeq	ILMN_217835	ILMN_217835	OLFR1330	NM_146334.1	NM_146334.1		258331	22129631	NM_146334.1	Olfr1330	NP_666446.1	ILMN_2864972	000460131	S	899	TCAAGAGGGCATTTTTCAAGGTGATGGGACATGGTAGGATGGACTACTGA	4	+	118566588-118566637	4qD2.1	Mus musculus olfactory receptor 1330 (Olfr1330), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR259-8; MGC123702	MOR259-8; MGC123702
Mus musculus	RefSeq	ILMN_185148	ILMN_236184	NELL1	NM_001037906.2	NM_001037906.2		338352	118130973	NM_001037906.2	Nell1	NP_001032995.1	ILMN_1218968	006510180	S	571	CCGGAGACCAACCTTCCTCCAGGAAGCAATCTATGGCTTGGGCAACGTAA	7	+	57431620-57431669	7qB5	Mus musculus NEL-like 1 (chicken) (Nell1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	B230343H07Rik; l7R6	B230343H07Rik; l7R6
Mus musculus	RefSeq	ILMN_185148	ILMN_236184	NELL1	NM_001037906.2	NM_001037906.2		338352	118130973	NM_001037906.2	Nell1	NP_001032995.1	ILMN_2763588	003890446	S	1486	GGACAACACAACTGTGACAAAAATGCCATCTGTACCAACACAGTCCAGGG	7	+	57816157-57816206	7qB5	Mus musculus NEL-like 1 (chicken) (Nell1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	B230343H07Rik; l7R6	B230343H07Rik; l7R6
Mus musculus	Riken	ILMN_205774	ILMN_205774	D130054A02RIK	ri|D130054A02|PX00184G18|AK051511|4574					AK051511	D130054A02Rik		ILMN_1249262	006290273	S	4335	GCAGCATCTGGGGACTGGACTGCATTCAGATAGATGAGCCCTGTAAGCTG										
Mus musculus	RefSeq	ILMN_220696	ILMN_310372	LOC100046930	XM_001477084.1	XM_001477084.1		100046930	149271275	XM_001477084.1	LOC100046930	XP_001477134.1	ILMN_2725464	006180082	S	881	CGCCTCTGCAGTATCCAGTTGAAAAGTCCTCTGGCAGGGGCCCACAAGCT					PREDICTED: Mus musculus similar to T cell signal transduction molecule1 SAP (LOC100046930), mRNA.					
Mus musculus	MEEBO	ILMN_189523	ILMN_189523	9330147J08RIK	scl0320467.2_77						9330147J08Rik		ILMN_1250402	006040470	S	4	GGTTCCAGATGGGGAATATTTCCTGTTGCTTCAAAGCCCAATGGGTTGGC										
Mus musculus	Riken	ILMN_204890	ILMN_204890	A530025E09RIK	ri|A530025E09|PX00140I18|AK040788|2110					AK040788	A530025E09Rik		ILMN_2568397	006560372	S	1564	GACCTCATAGTCACATACCCATAGCTCTGGGCTTGATCCCAACACCTTGG										
Mus musculus	RefSeq	ILMN_216510	ILMN_216510	LY86	NM_010745.1	NM_010745.1		17084	6754587	NM_010745.1	Ly86	NP_034875.1	ILMN_2671923	000430167	S	634	GGTCCCTGGACTCACCTAGCTGCAAGAACCACTGATAACCAAGAGAGGCT	13	+	37510542-37510591	13qA3.3	Mus musculus lymphocyte antigen 86 (Ly86), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MD-1; MD1	MD-1; MD1
Mus musculus	RefSeq	ILMN_192036	ILMN_229122	PFKFB2	NM_008825.3	NM_008825.3		18640	87116671	NM_008825.3	Pfkfb2	NP_032851.2	ILMN_1253966	004850008	S	4222	CTGTGTTCTGCTAGCAATGTAGGTGGCTTGAACCTTGAGCCTAATGTCCA	1	-	132585993-132586042	1qE4	Mus musculus 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 (Pfkfb2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 6000] [evidence IEA]; The chemical reactions and pathways involving fructose 2,6-bisphosphate. The D enantiomer is an important regulator of the glycolytic and gluconeogenic pathways. It inhibits fructose 1,6-bisphosphatase and activates phosphofructokinase [goid 6003] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 2,6-bisphosphate [goid 3873] [evidence IEA]; Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 4331] [evidence IEA]	4930568D07Rik	4930568D07Rik
Mus musculus	RefSeq	ILMN_215847	ILMN_259127	CABYR	NM_001042420.1	NM_001042420.1		71132	109255223	NM_001042420.1	Cabyr	NP_001035885.1	ILMN_2664327	004070309	S	1449	GATGCTGTTTGATTCAGCATTCAAGGTGGAGTTTGTCACCATGTGAACTG	18	+	12913578-12913627	18qA1	Mus musculus calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) (Cabyr), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any constituent part of a microtubule-based flagellum, a long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 44442] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]	1700016C01Rik; FSP-2; 4933421A18Rik; MGC130218; CBP86; MGC130217	1700016C01Rik; FSP-2; 4933421A18Rik; MGC130218; CBP86; MGC130217
Mus musculus	RefSeq	ILMN_216140	ILMN_259127	CABYR	NM_001042420.1	NM_001042420.1		71132	109255223	NM_001042420.1	Cabyr	NP_001035885.1	ILMN_2667761	000630369	S	646	GTTTTAATGGTGGACGTGGCAACAAGTACGCCCGCTGTTCCCCAGGACGT	18	+	12909540-12909589	18qA1	Mus musculus calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2) (Cabyr), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any constituent part of a microtubule-based flagellum, a long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 44442] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]	1700016C01Rik; FSP-2; 4933421A18Rik; MGC130218; CBP86; MGC130217	1700016C01Rik; FSP-2; 4933421A18Rik; MGC130218; CBP86; MGC130217
Mus musculus	MEEBO	ILMN_187113	ILMN_187113	SCL0001987.1_16	scl0001987.1_16	AK033824.1			26329496	AK033824.1	scl0001987.1_16		ILMN_2441277	002690093	S	15	CTGTTTGGTGACCGAGAGCAGCGCTGCCAAATTGCACCGGGGTTCATTTG										
Mus musculus	MEEBO	ILMN_210808	ILMN_210808	4933431E20	scl0329735.1_64	NM_177858.2			31342827	NM_177858.2	4933431E20		ILMN_2609394	006370382	S	2248	CTGGTTTCCTAGTTCGGCAGGGACGCTCACCTAATCTTTGTTCAGACCCT										
Mus musculus	RefSeq	ILMN_214166	ILMN_214166	MFSD10	NM_026660.2	NM_026660.2		68294	31980871	NM_026660.2	Mfsd10	NP_080936.1	ILMN_1252243	002260162	S	1669	CAGGGAGGCTCGCCACGCCCCTCCTCTCTCTGGATGGCAACCCAGCAGGA	5	-	34976404-34976453	5qB2	Mus musculus major facilitator superfamily domain containing 10 (Mfsd10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Tetran	Tetran
Mus musculus	RefSeq	ILMN_214166	ILMN_214166	MFSD10	NM_026660.2	NM_026660.2		68294	31980871	NM_026660.2	Mfsd10	NP_080936.1	ILMN_2836586	004890162	S	1603	TCTGGCTGCCAGGTGGGAACCTGGGCCCAGACCACTCAGCTCCTAGCACA	5	-	34976470-34976519	5qB2	Mus musculus major facilitator superfamily domain containing 10 (Mfsd10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Tetran	Tetran
Mus musculus	RefSeq	ILMN_190627	ILMN_225057	2810452K22RIK	NM_026048.3	NM_026048.3		67236	142344970	NM_026048.3	2810452K22Rik	NP_080324.1	ILMN_2471858	002470156	S	1585	TGGGGCCTGGCCGTGCTAGATGTTTAGCTTTCTCACTGTTCGCCACCGGT	12	-	112111183-112111232	12qF1	Mus musculus RIKEN cDNA 2810452K22 gene (2810452K22Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		Cinp; 1810047K05Rik	Cinp; 1810047K05Rik
Mus musculus	RefSeq	ILMN_202730	ILMN_212799	ARHGAP10	NM_030113.2	NM_030113.2		78514	116174785	NM_030113.2	Arhgap10	NP_084389.2	ILMN_2551840	003390296	S	20	TGGACATGACCGTGCTGCGCTCGCCGCGCGCTCAGCCCTGCTAGCCGCTC	8	-	80041737-80041786	8qC1	Mus musculus Rho GTPase activating protein 10 (Arhgap10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]	A930033B01Rik; PSGAP-s; PSGAP-m	A930033B01Rik; PSGAP-s; PSGAP-m
Mus musculus	RefSeq	ILMN_212799	ILMN_212799	ARHGAP10	NM_030113.2	NM_030113.2		78514	116174785	NM_030113.2	Arhgap10	NP_084389.2	ILMN_1227940	005890131	S	2157	GCCAGACCCGGCCATCCATGGTGCAGTGGCTAAATATGCAGTCTCCAACC	8	-	79783053-79783102	8qC1	Mus musculus Rho GTPase activating protein 10 (Arhgap10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]	A930033B01Rik; PSGAP-s; PSGAP-m	A930033B01Rik; PSGAP-s; PSGAP-m
Mus musculus	RefSeq	ILMN_202509	ILMN_255716	6330500D04RIK	NM_029679.1	NM_029679.1		193385	123314463	NM_029679.1	6330500D04Rik	NP_083955.1	ILMN_1243082	004920427	S	3786	ATCGTATGCCTTGCCGTCTTTCTGCTGTGTTCTCAGGGTTGAGTGGCCCC	13	+	24823863-24823912	13qA3.1	Mus musculus RIKEN cDNA 6330500D04 gene (6330500D04Rik), transcript variant 1, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	E430013J17Rik; 1700108N18Rik; AI225904	E430013J17Rik; 1700108N18Rik; AI225904
Mus musculus	RefSeq	ILMN_185963	ILMN_255716	6330500D04RIK	NM_029679.1	NM_029679.1		193385	123314463	NM_029679.1	6330500D04Rik	NP_083955.1	ILMN_1255560	004200202	S	5009	CCACAGCAGCTCAGTACCAGGGTAGAGATTCAGTCTCTTACAACGTGTGC	13	+	24825086-24825135	13qA3.1	Mus musculus RIKEN cDNA 6330500D04 gene (6330500D04Rik), transcript variant 1, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	E430013J17Rik; 1700108N18Rik; AI225904	E430013J17Rik; 1700108N18Rik; AI225904
Mus musculus	RefSeq	ILMN_214496	ILMN_243604	1500032L24RIK	NM_026914.1	NM_026914.1		69029	58037136	NM_026914.1	1500032L24Rik	NP_081190.1	ILMN_2648580	000830201	S	174	AGGTCAGTCATCGTCACTCGCAGCGGCGCCATTTTGCCCAAGCCGGTGAA	15	+	82176649-82176698	15qE1	Mus musculus RIKEN cDNA 1500032L24 gene (1500032L24Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			MGC106724	MGC106724
Mus musculus	RefSeq	ILMN_218048	ILMN_218048	6430510M02RIK	NM_176932.2	NM_176932.2		319517	31342413	NM_176932.2	6430510M02Rik	NP_795906.1	ILMN_1239411	002600068	S	2124	GGACAGGTTGAGTCCCAGGCTGGTAGGAGGTGAGTTATGTGGAAACATAG	2	-	37433188-37433225:37433226-37433237	2qB	Mus musculus RIKEN cDNA 6430510M02 gene (6430510M02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197235	ILMN_311422	LOC100046852	XM_001476908.1	XM_001476908.1		100046852	149264157	XM_001476908.1	LOC100046852	XP_001476958.1	ILMN_1217243	000020315	S	352	ACCTGTGTAAAAGGCTGACAAGGGCCACCGCTGCTGGAAACCTCACTGGG					PREDICTED: Mus musculus hypothetical protein LOC100046852 (LOC100046852), mRNA.					
Mus musculus	Riken	ILMN_207360	ILMN_207360	C030024L24RIK	ri|C030024L24|PX00665F14|AK081245|2586					AK081245	C030024L24Rik		ILMN_1214648	004860601	S	2523	ACCCCCCCCCCAACCCCCAGTGGGGTGCTTTGCATAACAGAATGTGTTCT										
Mus musculus	Riken	ILMN_204381	ILMN_204381	SCLY	ri|9830130K22|PX00118K03|AK036533|2302					AK036533	Scly		ILMN_2564539	000940278	S	2055	CAGAGCATCAAGGACCTCGGAGGCCATCAAAAATGGTGTGACACATGCGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-selenocysteine + reduced acceptor = hydrogen selenide + L-alanine + acceptor [goid 9000] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213180	ILMN_213180	TECTB	NM_009348.3	NM_009348.3		21684	118130418	NM_009348.3	Tectb	NP_033374.2	ILMN_2634484	001240725	S	2439	GCAGGCTAGTGCACGGTGGTCCCATGTATTCTAAACTTGGTATCTAGTTC	19	+	55270517-55270566	19qD2	Mus musculus tectorin beta (Tectb), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IDA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence TAS]	Tctnb	Tctnb
Mus musculus	RefSeq	ILMN_219090	ILMN_219090	YKT6	NM_019661.2	NM_019661.2		56418	31543970	NM_019661.2	Ykt6	NP_062635.2	ILMN_2814976	004200114	S	1959	TGGTGTACCTGTCTATTTCTCTGGATACTGCTAGCCAAAGGGCTCGGGCC	11	+	5867340-5867389	11qA1	Mus musculus YKT6 homolog (S. Cerevisiae) (Ykt6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process by which vesicles are directed to specific destination membranes, mediated by microtubules that grow between molecules at the vesicle membrane and target membrane surfaces [goid 6903] [evidence ISS]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence ISS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence ISS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a palmitoleyl group to a sulfur atom on the cysteine of a protein molecule [goid 19706] [evidence ISS]	AW105923; RP23-340E18.4; 0610042I15Rik; 1810013M05Rik	AW105923; RP23-340E18.4; 0610042I15Rik; 1810013M05Rik
Mus musculus	RefSeq	ILMN_194792	ILMN_255086	MRO	NM_027741.2	NM_027741.2		71263	89274176	NM_027741.2	Mro	NP_082017.2	ILMN_2756846	007000470	S	1607	GCTATTTGCTACCAACCAAGATACCAAGAAGCTGGCTTACAACATTGTCT	18	+	74038204-74038253	18qE2	Mus musculus Maestro (Mro), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4933435E20Rik; 4930507C04Rik	4933435E20Rik; 4930507C04Rik
Mus musculus	RefSeq	ILMN_219903	ILMN_225468	LOC638024	XM_913893.3	XM_913893.3		638024	149274266	XM_913893.3	LOC638024	XP_918986.2	ILMN_2715013	006590168	S	453	TTTGCTCATGGGACCTGTCACCCTGCACAGCAGCATGGAACACCTGGTCC					PREDICTED: Mus musculus similar to AF4/FMR2 family member 3 (Protein LAF-4) (Lymphoid nuclear protein related to AF4) (LOC638024), mRNA.					
Mus musculus	MEEBO	ILMN_186574	ILMN_186574	IVNS1ABP	scl17376.15_492				19263341	NM_028582	Ivns1abp		ILMN_2726690	001450482	S	2311	GGGGAGAAAGAGGCATATTTTACAGCTTCCAGCATTTTTGCCACACTAGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_209102	ILMN_209102	SERPINA9	scl0071907.1_137				21313653	NM_027997	Serpina9		ILMN_1219079	006200026	S	1037	CCCCAAGATGGGAATCCGCGATGCCTTTAACTCAAACGCTGACTTCTCCG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191558	ILMN_191558	RGS2	scl16190.6_258				31543585	NM_009061	Rgs2		ILMN_2480115	000670440	S	4	CCTAGACCACATCTCGTTTTAGATGTTGTCACAGCAATGGGTTCTGTAAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]		
Mus musculus	MEEBO	ILMN_191558	ILMN_191558	RGS2	scl16190.6_258				31543585	NM_009061	Rgs2		ILMN_2666622	001050300	S	2254	GGAACAAGCACAAGTACAGGAGGGACAACCTGGCTCATTTCTGTATCACC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]		
Mus musculus	RefSeq	ILMN_214210	ILMN_214210	BEND5	NM_026279.2	NM_026279.2		67621	118131214	NM_026279.2	Bend5	NP_080555.1	ILMN_2645561	004390215	S	1356	ACATCTGTGAGAAAATCATGGATATCAACAAATCTTGTAAAAATGAAGAA	4	+	111132433-111132482	4qD1	Mus musculus BEN domain containing 5 (Bend5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]				
Mus musculus	RefSeq	ILMN_214750	ILMN_214750	APOC3	NM_023114.3	NM_023114.3		11814	142344172	NM_023114.3	Apoc3	NP_075603.1	ILMN_2651539	002900735	S	171	CCAAGACGGTCCAGGATGCGCTAAGTAGCGTGCAGGAGTCCGATATAGCT	9	-	46042510-46042559	9qA5.2	Mus musculus apolipoprotein C-III (Apoc3), mRNA.	A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The release of triacylglycerols, any triester of glycerol, from storage within cells or tissues, making them available for metabolism [goid 6642] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The release of triacylglycerols, any triester of glycerol, from storage within cells or tissues, making them available for metabolism [goid 6642] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of triacylglycerol, any triester of glycerol [goid 19433] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	Apoc	Apoc
Mus musculus	MEEBO	ILMN_219516	ILMN_219516	AY498738	IGKV9-129_K00880_Ig_kappa_variable_9-129_191	XM_144774.1			20823481	XM_144774.1	AY498738		ILMN_2709926	006100201	S	174	CAGCAGAAACCAGGTGAAACTATTAAACACCTGATCTATGAAACATCCAA								Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IEA]		
Mus musculus	Riken	ILMN_205226	ILMN_205226	E230024I12RIK	ri|E230024I12|PX00209F22|AK054168|1434					AK054168	E230024I12Rik		ILMN_2570952	004730554	S	985	GTGGGATCATGTAACTATGTCATTAAAAAGCATGCGTGGGTGGCTGGGAG										
Mus musculus	RefSeq	ILMN_199557	ILMN_199557	LOC383632	XM_357166.1	XM_357166.1			38074301	XM_357166.1	LOC383632		ILMN_1223625	001010762	S	1089	GGTGGAGCTGATTGGGGACAAGCTCAGGACAAAACCACAGAACCCGTCCG										
Mus musculus	RefSeq	ILMN_213358	ILMN_250370	SYNM	NM_183312.3	NM_183312.3		233335	153792710	NM_183312.3	Synm	NP_899135.3	ILMN_2636266	001410215	S	4339	CTGGGGCTGGAGCTGGTCAAGTAGTTACTCGAAGCACAGTTTGTAAGGCT				7qC	Mus musculus synemin, intermediate filament protein (Synm), transcript variant 3, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence ISO]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence ISO]	AI852401; 4930412K21Rik; MGC56976; Synemin; E130104F11; Syn	AI852401; 4930412K21Rik; MGC56976; Synemin; E130104F11; Syn
Mus musculus	RefSeq	ILMN_213358	ILMN_250370	SYNM	NM_183312.3	NM_183312.3		233335	153792710	NM_183312.3	Synm	NP_899135.3	ILMN_1214880	001740364	S	1713	CGCGTGGGGACAGTTTATACGAGTTTTGCACCAGGTCACAGGCGTGGCTT				7qC	Mus musculus synemin, intermediate filament protein (Synm), transcript variant 3, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence ISO]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence ISO]	AI852401; 4930412K21Rik; MGC56976; Synemin; E130104F11; Syn	AI852401; 4930412K21Rik; MGC56976; Synemin; E130104F11; Syn
Mus musculus	RefSeq	ILMN_197147	ILMN_197147	LOC213711	XM_136718.2	XM_136718.2			38074291	XM_136718.2	LOC213711		ILMN_1253859	006420358	S	169	CCGCTGAAGGAACAAAAAGACAGGAAGCAGCAGTATGAGGAGCAGCAGTT										
Mus musculus	RefSeq	ILMN_187843	ILMN_250266	2310040A07RIK	XM_912979.2	XM_912979.2		69638	94371617	XM_912979.2	2310040A07Rik	XP_918072.1	ILMN_1237485	001940762	S	1179	CCTCCCACTGTTTGTTGGGTAATAAATGGAACTATGGCTTGCCCCGAGAT				4qA5	PREDICTED: Mus musculus RIKEN cDNA 2310040A07 gene (2310040A07Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_191539	ILMN_250266	2310040A07RIK	XM_912979.2	XM_912979.2		69638	94371617	XM_912979.2	2310040A07Rik	XP_918072.1	ILMN_2479977	006330300	S	872	CGTGGAATCGGATCCAAGAAGTCAGTCGGCCTGGGGTCCAGTCGATTTGA				4qA5	PREDICTED: Mus musculus RIKEN cDNA 2310040A07 gene (2310040A07Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_216463	ILMN_216463	OLFR710	NM_146601.1	NM_146601.1		258594	22128640	NM_146601.1	Olfr710	NP_666812.1	ILMN_2671352	001090687	S	863	ATCCTTTTCTCCTATTGGAATATTATCTCCACTGTGGTTCAAATACAATC	7	-	114087824-114087873	7qE3	Mus musculus olfactory receptor 710 (Olfr710), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR260-3	MOR260-3
Mus musculus	Riken	ILMN_206398	ILMN_206398	E130008J19RIK	ri|E130008J19|PX00208G17|AK087406|1358					AK087406	E130008J19Rik		ILMN_1214662	005690201	S	944	CATAGTAGTCCCCACTTGGGGTAGCCTGTTTGAATGTGCTACAAGTTTAC										
Mus musculus	RefSeq	ILMN_233199	ILMN_233199	SLC16A6	NM_134038.2	NM_134038.2		104681	71067108	NM_134038.2	Slc16a6	NP_598799.1	ILMN_3073406	007210326	I	234	GGCCCAGCCTCCGCCTTATTGGGTGCCTTTTGGGGTTTATTCTCTTCCCT	11	-	109334260-109334309	11qE1	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 6 (Slc16a6), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ESTM12; AW743111; MCT6; MGC27628	ESTM12; AW743111; MCT6; MGC27628
Mus musculus	RefSeq	ILMN_187569	ILMN_233199	SLC16A6	NM_134038.2	NM_134038.2		104681	71067108	NM_134038.2	Slc16a6	NP_598799.1	ILMN_1258950	003120427	S	2191	GCACTCCGTTCCTGTGATAAACTACTATATTATAAAGTGACATCCAGCCC	11	-	109314088-109314137	11qE1	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 6 (Slc16a6), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ESTM12; AW743111; MCT6; MGC27628	ESTM12; AW743111; MCT6; MGC27628
Mus musculus	RefSeq	ILMN_233199	ILMN_233199	SLC16A6	NM_134038.2	NM_134038.2		104681	71067108	NM_134038.2	Slc16a6	NP_598799.1	ILMN_3152241	005860475	A	3761	AGACTGCACCTGAAATGGGATGGATGTAGCCAAGCTCGGTGGGACCCCTC	11	-	109312518-109312567	11qE1	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 6 (Slc16a6), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ESTM12; AW743111; MCT6; MGC27628	ESTM12; AW743111; MCT6; MGC27628
Mus musculus	RefSeq	ILMN_208735	ILMN_252657	PACSIN3	NM_030880.1	NM_030880.1		80708	13559517	NM_030880.1	Pacsin3	NP_112019.1	ILMN_2628066	004590220	S	248	TTAGCTGCTTCCAAGAACGTGCCCGCATTGAGAAGGCCTACGCCCAGCAG	2	+	91100625-91100674	2qE1	Mus musculus protein kinase C and casein kinase substrate in neurons 3 (Pacsin3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AW413130; 6330413E15Rik; 4921507A02Rik	AW413130; 6330413E15Rik; 4921507A02Rik
Mus musculus	RefSeq	ILMN_208735	ILMN_252657	PACSIN3	NM_030880.1	NM_030880.1		80708	13559517	NM_030880.1	Pacsin3	NP_112019.1	ILMN_2693815	001070520	S	1537	GCCCATGAAGGGCAGGGGTCTGTGTCTAGAGTTGGAGGTTGGAATGATGG	2	+	91104596-91104645	2qE1	Mus musculus protein kinase C and casein kinase substrate in neurons 3 (Pacsin3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AW413130; 6330413E15Rik; 4921507A02Rik	AW413130; 6330413E15Rik; 4921507A02Rik
Mus musculus	RefSeq	ILMN_214736	ILMN_214736	OLFR1509	NM_020514.1	NM_020514.1		57271	11464992	NM_020514.1	Olfr1509	NP_065260.1	ILMN_2651333	000060014	S	554	TCAAGCTGGCCTGCACAGATACATACCTTACAGGGATTCTGATCGTGTCC	14	+	53070643-53070692	14qC2	Mus musculus olfactory receptor 1509 (Olfr1509), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Or83; MOR244-3; Mor83	Or83; MOR244-3; Mor83
Mus musculus	RefSeq	ILMN_197678	ILMN_197678	LOC229875	XM_131256.3	XM_131256.3			38077289	XM_131256.3	LOC229875		ILMN_2528973	000580048	S	1935	CCCTTACTCCGACGAAGTCTGTGGGGAAGAGCAACCGGTGTGTCACGACT										
Mus musculus	RefSeq	ILMN_185854	ILMN_253710	NDST1	NM_008306.4	NM_008306.4		15531	145279230	NM_008306.4	Ndst1	NP_032332.2	ILMN_2645409	004250707	S	2772	GGCTGCGGGAAGACCTCCAGAACACCAGGTAGCCTTGGCCACCACAGCCA				18qE1	Mus musculus N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 (Ndst1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The chemical reactions and pathways resulting in the formation of polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages [goid 271] [evidence IMP]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IMP]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence TAS]; The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence TAS]; The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process by which the anatomical structures of neurocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The neurocranium is the portion of the vertebrate skull surrounding the brain [goid 48702] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-desulfoheparin = adenosine 3',5'-bisphosphate + heparin [goid 15016] [evidence TAS]	NDST-1; 1200015G06Rik; Hsst	NDST-1; 1200015G06Rik; Hsst
Mus musculus	RefSeq	ILMN_185854	ILMN_253710	NDST1	NM_008306.4	NM_008306.4		15531	145279230	NM_008306.4	Ndst1	NP_032332.2	ILMN_1221634	004590593	S	5821	CATGAGACTATTTATCCCTAGTGTTGCCCTAAGAGGTAGGGCCTTTTACC				18qE1	Mus musculus N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 (Ndst1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The chemical reactions and pathways resulting in the formation of polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages [goid 271] [evidence IMP]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IMP]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence TAS]; The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence TAS]; The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process by which the anatomical structures of neurocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The neurocranium is the portion of the vertebrate skull surrounding the brain [goid 48702] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-desulfoheparin = adenosine 3',5'-bisphosphate + heparin [goid 15016] [evidence TAS]	NDST-1; 1200015G06Rik; Hsst	NDST-1; 1200015G06Rik; Hsst
Mus musculus	RefSeq	ILMN_222731	ILMN_231176	ST8SIA1	NM_011374.2	NM_011374.2		20449	70980542	NM_011374.2	St8sia1	NP_035504.2	ILMN_1249093	002340609	S	8099	TTCTGAAACACCGCTAGACTTAGGCTTATCATGTGGCGTAGTTTGATCTG	6	-	142770907-142770956	6qG3	Mus musculus ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 (St8sia1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IEA]	9330109E03Rik; GD3S; Sia-T; Siat8; Siat8a	9330109E03Rik; GD3S; Sia-T; Siat8; Siat8a
Mus musculus	RefSeq	ILMN_192450	ILMN_231176	ST8SIA1	NM_011374.2	NM_011374.2		20449	70980542	NM_011374.2	St8sia1	NP_035504.2	ILMN_1225487	000940020	S	1600	ATCAGTCACCACTACTATGACAACGTCTTGCCCTTCTCAGGCTACCATGC	6	-	142777406-142777455	6qG3	Mus musculus ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 (St8sia1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IEA]	9330109E03Rik; GD3S; Sia-T; Siat8; Siat8a	9330109E03Rik; GD3S; Sia-T; Siat8; Siat8a
Mus musculus	RefSeq	ILMN_218579	ILMN_218579	XKRX	NM_183319.2	NM_183319.2		331524	59858576	NM_183319.2	Xkrx	NP_899142.2	ILMN_3161225	006200619	S	2622	GGAACTGGGGTCAGGTAAACACTCTACCAACTGAGACATCCTTGGCCCCC	X	-	130683786-130683835	XqE3	Mus musculus X Kell blood group precursor related X linked (Xkrx), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A630026F04	A630026F04
Mus musculus	RefSeq	ILMN_223474	ILMN_223474	BC031853	NM_172758.3	NM_172758.3		234595	146198829	NM_172758.3	BC031853	NP_766346.1	ILMN_2764549	000610634	S	2977	CAGACTTGCTGAATTGTTGTTCTCCCATCCATCCCTGGTACTTCTGGTCC				8qD1	Mus musculus cDNA sequence BC031853 (BC031853), mRNA.				D430050E18; MGC25764	D430050E18; MGC25764
Mus musculus	RefSeq	ILMN_215178	ILMN_215178	BC028528	NM_153513.1	NM_153513.1		229600	23943800	NM_153513.1	BC028528	NP_705733.1	ILMN_2656422	003370221	S	295	CCTCAGAATCCTGTAACCACGAAACCAGTGACCACAGAACCAGTGACCAC	3	-	95692085-95692134	3qF2.1	Mus musculus cDNA sequence BC028528 (BC028528), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			L259; MGC41379	L259; MGC41379
Mus musculus	RefSeq	ILMN_215178	ILMN_215178	BC028528	NM_153513.1	NM_153513.1		229600	23943800	NM_153513.1	BC028528	NP_705733.1	ILMN_2765335	007040014	S	94	GAAGAGGGTGATTACTATCAAGTGGCATATTATTATTACACAGTGACCCC	3	-	95693653-95693702	3qF2.1	Mus musculus cDNA sequence BC028528 (BC028528), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			L259; MGC41379	L259; MGC41379
Mus musculus	RefSeq	ILMN_215178	ILMN_215178	BC028528	NM_153513.1	NM_153513.1		229600	23943800	NM_153513.1	BC028528	NP_705733.1	ILMN_2837802	005130220	S	259	GCCTCTTCATACAGTCTTCATACAGAACTTATGGACCCTCAGAATCCTGT	3	-	95692121-95692170	3qF2.1	Mus musculus cDNA sequence BC028528 (BC028528), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			L259; MGC41379	L259; MGC41379
Mus musculus	Riken	ILMN_204358	ILMN_204358	PAM	ri|C430006I19|PX00078G22|AK049423|1658					AK049423	Pam		ILMN_1236965	000670497	S	1447	ACTGGGAAAAGCATGGGGCAATTAGTGGAAATCTCCATAGACCAAGTGCC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another [goid 6518] [evidence TAS]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: peptidyl-glycine + ascorbate + O2 = peptidyl(2-hydroxyglycine) + dehydroascorbate + H2O [goid 4504] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: peptidylamidoglycolate = peptidyl amide + glyoxylate [goid 4598] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_206780	ILMN_206780	ACVRL1	ri|E030043C22|PX00206B16|AK087308|1417					AK087308	Acvrl1		ILMN_1221708	002940292	S	1038	AGGTTTTGATCCTGAGCATGGGAGTGGGGTGGGGCAGGGAAGCAGCTAAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with activin-bound type II activin receptor to initiate a change in cell activity; upon binding, acts as a downstream transducer of activin signals [goid 16361] [evidence ISO]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence ISO]		
Mus musculus	RefSeq	ILMN_200062	ILMN_231539	LOC634059	XM_908667.2	XM_908667.2		634059	94400063	XM_908667.2	LOC634059	XP_913760.2	ILMN_1231960	007210369	S	165	CTTCACCAGCAAGACCGAAACAGAGCCCGTGTTCTGGGTCTACGTGAAGG	16	+	11281357-11281379:11308797-11308823		PREDICTED: Mus musculus similar to RUN domain containing 2A (LOC634059), mRNA.					
Mus musculus	MEEBO	ILMN_209828	ILMN_209828	9030227G01RIK	scl0320336.2_6	NM_177136.2			31342882	NM_177136.2	9030227G01Rik		ILMN_2686433	000580053	S	2704	CCGAAGAGTTTTAAAGTGCATGTGCTGACGCCATGGCTAGTTCTTATTGC										
Mus musculus	MEEBO	ILMN_194429	ILMN_194429	SCL000877.1_11	scl000877.1_11						scl000877.1_11		ILMN_2506352	006840139	S	9	AGATCGATTTTAGCAAAGTTCAGTCAAGATGTGGTTCCAAGGATAACATC										
Mus musculus	RefSeq	ILMN_245994	ILMN_245994	RPS25	NM_024266.3	NM_024266.3		75617	51491883	NM_024266.3	Rps25	NP_077228.1	ILMN_2887619	005670228	S	377	CACAAAGGGTGGGGACGCTCCAGCTGCTGGCGAAGATGCATGAACAGGTT	9	+	44218089-44218131:44218132-44218135:44218229-44218231	9qA5.2	Mus musculus ribosomal protein S25 (Rps25), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810009D21Rik	2810009D21Rik
Mus musculus	MEEBO	ILMN_209573	ILMN_209573	E330037G11RIK	scl35078.1.1_244	NM_175323.2			31341599	NM_175323.2	E330037G11Rik		ILMN_2597095	004590528	S	942	TTCCCTAGTATTTTCGAAGATGTTATAAATTAGACTCTAAAATCATTGCC										
Mus musculus	Riken	ILMN_202205	ILMN_202205	1700101I19RIK	ri|1700101I19|ZX00077N01|AK007108|416					AK007108	1700101I19Rik		ILMN_2547808	001500079	S	29	ACCGGAGGACGCTGGCGAGTAGCGGAGGAGCGAGGAGACTTAGCCGCCAC										
Mus musculus	Riken	ILMN_205352	ILMN_205352	NBEA	ri|C130038A22|PX00168H22|AK048157|3740					AK048157	Nbea		ILMN_2571906	003940601	S	3681	CCAACTCAGCATTTGTTGGTGCACCACTACAGTGTGCATTGCACATAGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence NAS]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISS]; The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles [goid 6892] [evidence NAS]	Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence NAS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]		
Mus musculus	RefSeq	ILMN_201397	ILMN_312451	LOC631010	XM_001478616.1	XM_001478616.1		631010	149268617	XM_001478616.1	LOC631010	XP_001478666.1	ILMN_1240227	001710079	S	655	AAGGTCCCATTCGACTCGGTCACCATACCTGAGCTGGCAGGTGTATACCC	17	-	22176802-22176851	17qA3.3	PREDICTED: Mus musculus similar to EG635895 protein (LOC631010), mRNA.					
Mus musculus	RefSeq	ILMN_217203	ILMN_217203	POLR2G	NM_026329.2	NM_026329.2		67710	141802245	NM_026329.2	Polr2g	NP_080605.1	ILMN_2680262	007330594	S	795	CCATAAACATGTTGTCCTTGTTTCTCATGGAAATGTTGTCTTCTCTTGGT	19	-	8867642-8867691	19qA	Mus musculus polymerase (RNA) II (DNA directed) polypeptide G (Polr2g), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	2410046K11Rik; C76415; A230108L04Rik	2410046K11Rik; C76415; A230108L04Rik
Mus musculus	RefSeq	ILMN_214471	ILMN_314989	LOC100046406	XM_001477157.1	XM_001477157.1		100046406	149269313	XM_001477157.1	LOC100046406	XP_001477207.1	ILMN_2686603	003400468	S	363	ACGCTGCTTGGGACTTGAGATCTGTGGCCGAAGGACCGTCACCACATAAC					PREDICTED: Mus musculus hypothetical protein LOC100046406 (LOC100046406), mRNA.					
Mus musculus	RefSeq	ILMN_188097	ILMN_243802	GTPBP10	NM_153116.1	NM_153116.1		207704	83320122	NM_153116.1	Gtpbp10	NP_694756.1	ILMN_1239784	001580131	S	1793	GCATAACGTGTACAGAAGACCCAGGCTAGCAAGCACACAGTCTAGCAAGG	5	-	5538546-5538595	5qA1	Mus musculus GTP-binding protein 10 (putative) (Gtpbp10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	BC034507; MGC30495	BC034507; MGC30495
Mus musculus	RefSeq	ILMN_188097	ILMN_243802	GTPBP10	NM_153116.1	NM_153116.1		207704	83320122	NM_153116.1	Gtpbp10	NP_694756.1	ILMN_1213454	007330601	S	514	GGAAAATCCTCCTTACTGAGTCGGGTTTCCCATGCTACACCTGTGATTGC	5	-	5547937-5547986	5qA1	Mus musculus GTP-binding protein 10 (putative) (Gtpbp10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	BC034507; MGC30495	BC034507; MGC30495
Mus musculus	RefSeq	ILMN_215089	ILMN_243802	GTPBP10	NM_153116.1	NM_153116.1		207704	83320122	NM_153116.1	Gtpbp10	NP_694756.1	ILMN_2655395	006100240	S	304	GTGCCTGCTCCTGTGGGTATCTCAGTAACTGATGAAAACGGCCAAGTGCT	5	-	5556066-5556115	5qA1	Mus musculus GTP-binding protein 10 (putative) (Gtpbp10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	BC034507; MGC30495	BC034507; MGC30495
Mus musculus	RefSeq	ILMN_188097	ILMN_243802	GTPBP10	NM_153116.1	NM_153116.1		207704	83320122	NM_153116.1	Gtpbp10	NP_694756.1	ILMN_2743290	005490021	S	2868	TGATTGTACTTAAATTTCTTCTGACTTAATAATGTGTATAGTTTGATAAA	5	-	5537471-5537520	5qA1	Mus musculus GTP-binding protein 10 (putative) (Gtpbp10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	BC034507; MGC30495	BC034507; MGC30495
Mus musculus	RefSeq	ILMN_213231	ILMN_260769	2310022M17RIK	NM_001024919.1	NM_001024919.1		69556	67906186	NM_001024919.1	2310022M17Rik	NP_001020090.1	ILMN_1238389	006510561	S	362	GCCAGCTTACCAGAACCTAAGGCAGAAGGTGGATAATTTCGTGTCAACAC	11	-	31569319-31569368	11qA4	Mus musculus RIKEN cDNA 2310022M17 gene (2310022M17Rik), mRNA.				RP23-475A8.1; Fam44b; MGC144642	RP23-475A8.1; Fam44b; MGC144642
Mus musculus	RefSeq	ILMN_213231	ILMN_260769	2310022M17RIK	NM_001024919.1	NM_001024919.1		69556	67906186	NM_001024919.1	2310022M17Rik	NP_001020090.1	ILMN_1254565	006900487	S	632	TCCAGAACCTGAAAGCCAGGACCCTCCAGCACCATCCCAGGATGCTTCCT	11	-	31566739-31566788	11qA4	Mus musculus RIKEN cDNA 2310022M17 gene (2310022M17Rik), mRNA.				RP23-475A8.1; Fam44b; MGC144642	RP23-475A8.1; Fam44b; MGC144642
Mus musculus	MEEBO	ILMN_212374	ILMN_212374	HOOK3	scl34980.20_532	XM_134108.3			38089150	XM_134108.3	Hook3		ILMN_2625716	004230326	S	5107	CCACTGTGTGGCTTAGGTCAGGATTTAGGGGACTTCAGTTTCTCCCGTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213455	ILMN_213455	CNR1	NM_007726.3	NM_007726.3		12801	76096369	NM_007726.3	Cnr1	NP_031752.1	ILMN_2670261	001440647	S	1852	GCCTCTAGATAACAGCATGGGGGACTCAGACTGCCTGCACAAGCACGCCA	4	+	34031851-34031900	4qA5	Mus musculus cannabinoid receptor 1 (brain) (Cnr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with cannabinoids to initiate a change in cell activity [goid 4949] [evidence IEA]	CB1	CB1
Mus musculus	RefSeq	ILMN_213455	ILMN_213455	CNR1	NM_007726.3	NM_007726.3		12801	76096369	NM_007726.3	Cnr1	NP_031752.1	ILMN_2637188	002340408	S	732	TCCCTCTAACTTCCTTCAGGGGTAGTCCCTTCCAAGAAAAGATGACGGCA	4	+	34030731-34030780	4qA5	Mus musculus cannabinoid receptor 1 (brain) (Cnr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with cannabinoids to initiate a change in cell activity [goid 4949] [evidence IEA]	CB1	CB1
Mus musculus	RefSeq	ILMN_196961	ILMN_196961	LOC241215	XM_110859.3	XM_110859.3			38050437	XM_110859.3	LOC241215		ILMN_1239730	001410577	S	3016	CTGGCTATCCTGCTCTCCAGGAATGAACTTGAGGTGTCCCTGGAGGAATT										
Mus musculus	MEEBO	ILMN_210294	ILMN_210294	C130067A03RIK	scl24096.6_140	NM_177239.1			33859798	NM_177239.1	C130067A03Rik		ILMN_1217271	002710681	S	1809	GTTGTAGAGAGCTTTCTAGTTCTTTGGGTGGGAATTCTGTGTTGTCCTTT										
Mus musculus	RefSeq	ILMN_221341	ILMN_254094	MED14	NM_012005.3	NM_012005.3		26896	115270971	NM_012005.3	Med14	NP_036135.3	ILMN_1242039	002340068	S	4927	CCTTGCCATCAGTACCTGCCGCTCTGTACATCACAAAGTTGGAATGCATG	X	-	12256973-12257022	XqA1.1	Mus musculus mediator complex subunit 14 (Med14), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	9930001L01Rik; AU041628; Trap170; Crsp2; Gm641; ORF1	9930001L01Rik; AU041628; Trap170; Crsp2; Gm641; ORF1
Mus musculus	RefSeq	ILMN_198529	ILMN_254094	MED14	NM_012005.3	NM_012005.3		26896	115270971	NM_012005.3	Med14	NP_036135.3	ILMN_1232916	004780364	S	4463	GCTTCAGGTACCACTCAGCAGGCAGACATTCCCAGACAGCAGAACTCTTC	X	-	12257437-12257486	XqA1.1	Mus musculus mediator complex subunit 14 (Med14), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	9930001L01Rik; AU041628; Trap170; Crsp2; Gm641; ORF1	9930001L01Rik; AU041628; Trap170; Crsp2; Gm641; ORF1
Mus musculus	RefSeq	ILMN_218874	ILMN_254094	MED14	NM_012005.3	NM_012005.3		26896	115270971	NM_012005.3	Med14	NP_036135.3	ILMN_1228189	007560411	S	1505	GTACACGCAAGAGCCCACCAGAGGCTGCAGGAACTGAAGGCCATTCTTAG	X	-	12321865-12321914	XqA1.1	Mus musculus mediator complex subunit 14 (Med14), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	9930001L01Rik; AU041628; Trap170; Crsp2; Gm641; ORF1	9930001L01Rik; AU041628; Trap170; Crsp2; Gm641; ORF1
Mus musculus	RefSeq	ILMN_212770	ILMN_250227	TTC21B	NM_001047604.1	NM_001047604.1		73668	114158710	NM_001047604.1	Ttc21b	NP_001041069.1	ILMN_2630083	002350059	S	1375	AAGACCTCCCGCTCGGCATACAGTATTTTGAGAAGCTCAACCCTGACTTC	2	-	66073144-66073193	2qC1.3	Mus musculus tetratricopeptide repeat domain 21B (Ttc21b), mRNA. XM_991856	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	mKIAA1992; Thm1; 2410066K11Rik	mKIAA1992; Thm1; 2410066K11Rik
Mus musculus	RefSeq	ILMN_218227	ILMN_226087	OBSCN	NM_001003914.1	NM_001003914.1		380698	51491853	NM_001003914.1	Obscn	NP_001003914.1	ILMN_2693176	000840608	S	4643	TAACCTTCCCCACCGTGCGGTTGCGCGCCTTTGTGCGCGAGCGCGAGAAG	11	-	58807881-58807930	11qB1.3	Mus musculus obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (Obscn), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence ISO]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ankyrin, a 200 kDa cytoskeletal protein that attaches other cytoskeletal proteins to integral membrane proteins [goid 30506] [evidence ISO]	MGC51514; UNC89; OTTMUSG00000005786; BC046431; Gm878	MGC51514; UNC89; OTTMUSG00000005786; BC046431; Gm878
Mus musculus	RefSeq	ILMN_191009	ILMN_191009	TRAPPC5	NM_025701.2	NM_025701.2		66682	31541948	NM_025701.2	Trappc5	NP_079977.2	ILMN_2845600	001690068	S	2190	AGAAAGAGCAGTGTGCTGTTAACTGCTGAGCCATGGCCCTCTAGCCCTCC	8	+	3681112-3681161	8qA1.1	Mus musculus trafficking protein particle complex 5 (Trappc5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4021401A16Rik; TRS31	4021401A16Rik; TRS31
Mus musculus	RefSeq	ILMN_196912	ILMN_260910	GM973	NM_001013771.2	NM_001013771.2		381260	124244084	NM_001013771.2	Gm973	NP_001013793.2	ILMN_1229313	004830639	S	3243	GGAAGCAGCAAAGCTAGCCCTGGAAGAAGCCACAAAACTAGCCCAGGAGC	1	+	59691001-59691050	1qC1.3	Mus musculus gene model 973, (NCBI) (Gm973), mRNA.					
Mus musculus	RefSeq	ILMN_218339	ILMN_218339	D730001G18RIK	NM_172433.2	NM_172433.2		78725	142367552	NM_172433.2	D730001G18Rik	NP_766021.1	ILMN_2694552	003780364	S	1403	GGCAGAGCCAGAGCCCTTCAAGTCTGGAGCGTTTTATTCCCTACCCCTGC	15	-	74601380-74601429	15qD3	Mus musculus RIKEN cDNA D730001G18 gene (D730001G18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_236623	ILMN_236623	EG245297	NM_001018086.2	NM_001018086.2		245297	66392588	NM_001018086.2	EG245297	NP_001018096.1	ILMN_3076680	002600128	I	2690	GGATGGTTTCTTCCAAGGTTTCAAGTGTTCTGGGCTGTAGGGCTCCTTCC	12	+	18071885-18071934	12qA1.2	Mus musculus predicted gene, EG245297 (EG245297), mRNA.					
Mus musculus	RefSeq	ILMN_236623	ILMN_236623	EG245297	NM_001018086.2	NM_001018086.2		245297	66392588	NM_001018086.2	EG245297	NP_001018096.1	ILMN_3155626	001230274	A	2280	TGCAGGCCATCTACAAGATGGTGTCCTCCATGATGAAGATGCCTGAGGAC	12	+	18070533-18070582	12qA1.2	Mus musculus predicted gene, EG245297 (EG245297), mRNA.					
Mus musculus	RefSeq	ILMN_223627	ILMN_223627	CHRM2	NM_203491.1	NM_203491.1		243764	45237188	NM_203491.1	Chrm2	NP_987076.1	ILMN_2766727	000990739	S	566	GCACTGCCATTGCGGCTTTCTATCTGCCTGTCATCATCATGACTGTGCTC	6	+	36473775-36473824	6qB1	Mus musculus cholinergic receptor, muscarinic 2, cardiac (Chrm2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to one of its physiological ligands; muscarinic acetylcholine receptors activate inhibitory G proteins and can be activated by the fungal alkaloid muscarine [goid 7213] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4981] [evidence IMP]	Chrm-2; M2	Chrm-2; M2
Mus musculus	RefSeq	ILMN_223627	ILMN_223627	CHRM2	NM_203491.1	NM_203491.1		243764	45237188	NM_203491.1	Chrm2	NP_987076.1	ILMN_2971508	002370259	S	984	CACCAAGACCCAAAAGGGTGACGCATGCACACCAACAAGTACCACAGTAG	6	+	36474193-36474242	6qB1	Mus musculus cholinergic receptor, muscarinic 2, cardiac (Chrm2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to one of its physiological ligands; muscarinic acetylcholine receptors activate inhibitory G proteins and can be activated by the fungal alkaloid muscarine [goid 7213] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4981] [evidence IMP]	Chrm-2; M2	Chrm-2; M2
Mus musculus	RefSeq	ILMN_186650	ILMN_247053	SATB1	NM_009122.1	NM_009122.1		20230	6677850	NM_009122.1	Satb1	NP_033148.1	ILMN_1220726	000070386	S	2859	CTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCC	17	-	51878807-51878856	17qC	Mus musculus special AT-rich sequence binding protein 1 (Satb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell [goid 43367] [evidence IMP]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell [goid 43374] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; An automatic response to a stimulus beginning with a nerve impulse from a receptor and ending with the action of an effector such as a gland or a muscle. Signaling never reaches a level of consciousness [goid 60004] [evidence IMP]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AW413156; 2610306G12Rik	AW413156; 2610306G12Rik
Mus musculus	RefSeq	ILMN_236522	ILMN_236522	COL5A2	NM_007737.2	NM_007737.2		12832	86613789	NM_007737.2	Col5a2	NP_031763.2	ILMN_2802687	006420020	S	6240	GGGCCATCCCAAAGGACAAGGCCCACATAGAACTTTGATCATGTATCTCT	1	-	45431501-45431550	1qC1.1	Mus musculus collagen, type V, alpha 2 (Col5a2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]	The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]	D230017N05; 1110014L14Rik	D230017N05; 1110014L14Rik
Mus musculus	RefSeq	ILMN_195763	ILMN_236522	COL5A2	NM_007737.2	NM_007737.2		12832	86613789	NM_007737.2	Col5a2	NP_031763.2	ILMN_1221670	006760121	S	6400	CCTGGTAGTTTTTGTTCACAATTTAGTAGACGATGCAACAAGTACCTACC	1	-	45431341-45431390	1qC1.1	Mus musculus collagen, type V, alpha 2 (Col5a2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]	The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]	D230017N05; 1110014L14Rik	D230017N05; 1110014L14Rik
Mus musculus	RefSeq	ILMN_214857	ILMN_214857	WDR77	NM_027432.3	NM_027432.3		70465	31541912	NM_027432.3	Wdr77	NP_081708.1	ILMN_2820260	001990735	S	3005	GTGGCTCACTGTCATGGCTTCAAAAATACCCAGTGAGGGCCAGGAGATTG	3	+	105772130-105772179	3qF2.2	Mus musculus WD repeat domain 77 (Wdr77), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			C79984; 2610312E17Rik	C79984; 2610312E17Rik
Mus musculus	RefSeq	ILMN_214857	ILMN_214857	WDR77	NM_027432.3	NM_027432.3		70465	31541912	NM_027432.3	Wdr77	NP_081708.1	ILMN_2735438	005810730	S	1914	GATTTGAGATCCAGCATCAGGGAAACTGTCGGAAATACTAAAAGGTGAAA	3	+	105771039-105771088	3qF2.2	Mus musculus WD repeat domain 77 (Wdr77), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			C79984; 2610312E17Rik	C79984; 2610312E17Rik
Mus musculus	RefSeq	ILMN_214857	ILMN_214857	WDR77	NM_027432.3	NM_027432.3		70465	31541912	NM_027432.3	Wdr77	NP_081708.1	ILMN_2652732	006180170	S	3220	GAAAGAGGCCTTCTAAAAGTCATCAACTTCACACAGCATCGTAACATTGC	3	+	105772345-105772394	3qF2.2	Mus musculus WD repeat domain 77 (Wdr77), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			C79984; 2610312E17Rik	C79984; 2610312E17Rik
Mus musculus	MEEBO	ILMN_223058	ILMN_223058	4930591A17RIK	scl19800.3.1_194	NM_026596.1			13386083	NM_026596.1	4930591A17Rik		ILMN_1229087	001070241	S	538	AGCGTCACTCGCCACCCGTGTTCCAGGCAAAGTGCGTCCTCTTCAAGCCT										
Mus musculus	RefSeq	ILMN_218970	ILMN_218970	4930519N16RIK	NM_029173.3	NM_029173.3		75124	146141105	NM_029173.3	4930519N16Rik	NP_083449.1	ILMN_2702547	002360711	S	703	CGCGGGCTAGCTTGCTTTCAGAACTGGGTGGAAGCAGCCGATGTTTTCCA				13qA5	Mus musculus RIKEN cDNA 4930519N16 gene (4930519N16Rik), mRNA.				MGC27636	MGC27636
Mus musculus	MEEBO	ILMN_196249	ILMN_196249	MYCBP	scl056309.5_134				9789874	NM_019660	Mycbp		ILMN_2657600	001430433	S	1219	TATCCCTGTCGCAAGTACGGTAGCGGGTAGTCGAAGGCGAACGGTTGGGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_220494	ILMN_220494	CD3G	NM_009850.1	NM_009850.1		12502	6753349	NM_009850.1	Cd3g	NP_033980.1	ILMN_2722784	000940747	S	487	CGGCTTTATCTTCGCTGAGGTCATCAGCATCTTCTTCCTTGCTCTTGGTG	9	-	44781595-44781644	9qA5.2	Mus musculus CD3 antigen, gamma polypeptide (Cd3g), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein [goid 42105] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]	Ctg3; T3g; Ctg-3	Ctg3; T3g; Ctg-3
Mus musculus	MEEBO	ILMN_194724	ILMN_194724	TRAF3IP1	scl17646.15.1_197	XM_129927.2			38050344	XM_129927.2	Traf3ip1		ILMN_2509024	005080181	S	10	TTTTTATATGCTGTAGTCATCAGATTGTATCATAAAGTTTTATTTTTCTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat6 protein [goid 42527] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 51101] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]; Interacting selectively with monomeric or multimeric forms of tubulin, including microtubules [goid 15631] [evidence ISO]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]		
Mus musculus	RefSeq	ILMN_201010	ILMN_201010	LOC385542	XM_358275.1	XM_358275.1			38087920	XM_358275.1	LOC385542		ILMN_2540788	006180008	S	150	CCCTTCTCTTTATTTGGTGAAGTATGACGGAATTGACAGTGTCTACGGAC										
Mus musculus	MEEBO	ILMN_214911	ILMN_214911	NRG1	scl000693.1_379	NM_178591.1			30519888	NM_178591.1	Nrg1		ILMN_2653385	006220427	S	1485	GTGCTTACCTGCAAGGTGAACAGGACAAATAGAGGTTGCAAGAGAGCAGA						The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The disaggregation of a protein complex into its constituent components, occurring at the level of an individual cell. Protein complexes may have other associated non-protein prosthetic groups, such as nucleic acids, metal ions or carbohydrate groups [goid 43624] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]	The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence ISO]; Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [evidence IDA]; Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [evidence IGI]		
Mus musculus	RefSeq	ILMN_219497	ILMN_219497	B630019K06RIK	NM_175327.3	NM_175327.3		102941	141802569	NM_175327.3	B630019K06Rik	NP_780536.1	ILMN_1222840	005560021	S	2426	CTGAATTAACTGCCAATGAATTGTAAATGTTACTGTCACATCAGTGTACC	X	+	8471933-8471982	XqA1.1	Mus musculus RIKEN cDNA B630019K06 gene (B630019K06Rik), mRNA.				AI843180	AI843180
Mus musculus	RefSeq	ILMN_190806	ILMN_250298	LOC674888	XM_977857.2	XM_977857.2		674888	149258811	XM_977857.2	LOC674888	XP_982951.2	ILMN_1225889	003420195	S	3709	CAAGACTCTGCTGGGATGGCTTTTCTGAGAACAGGAACCTGGTGTGCGGG					PREDICTED: Mus musculus similar to Integrator complex subunit 10 (LOC674888), mRNA.					
Mus musculus	RefSeq	ILMN_208789	ILMN_208789	CLK2	NM_007712.1	NM_007712.1		12748	6671763	NM_007712.1	Clk2	NP_031738.1	ILMN_2885016	002970646	S	1145	ACGTTGGCTTCACCCTCTTCCAGACCCATGACAACAGAGAGCATCTAGCC	3	+	89261145-89261167:89261319-89261345	3qF1	Mus musculus CDC-like kinase 2 (Clk2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]	AU041688	AU041688
Mus musculus	RefSeq	ILMN_218935	ILMN_218935	MEFV	NM_019453.1	NM_019453.1		54483	9506892	NM_019453.1	Mefv	NP_062326.1	ILMN_2702141	004220437	S	2717	GGGCCATATGATGAAGAACATAGCTCTTCTGACCATCAGTCCTGTCAGTG	16	-	3707547-3707596	16qA1	Mus musculus Mediterranean fever (Mefv), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC124344; MGC124345; pyrin; TRIM20; FMF	MGC124344; MGC124345; pyrin; TRIM20; FMF
Mus musculus	RefSeq	ILMN_200100	ILMN_239761	GM1679	NM_001033459.2	NM_001033459.2		381667	142371683	NM_001033459.2	Gm1679	NP_001028631.1	ILMN_1225092	003130440	S	343	CAACACCACCTTGAATGCTGGGACCTGTGCTGCCTCCCACTGAGCGAGAA	5	+	110783762-110783811	5qF	Mus musculus gene model 1679, (NCBI) (Gm1679), mRNA.					
Mus musculus	RefSeq	ILMN_246280	ILMN_246280	OLFR93	NM_001011813.1	NM_001011813.1		258051	58801391	NM_001011813.1	Olfr93	NP_001011813.1	ILMN_2792336	004390482	S	588	GTTGTCAGTTGCAGGTGTCATCTTCCTGCTTGTACCTCTGAGCCTCATCA	17	-	37336516-37336565	17qB1	Mus musculus olfactory receptor 93 (Olfr93), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-39P	MOR256-39P
Mus musculus	RefSeq	ILMN_217411	ILMN_217411	OLFR307	NM_146617.1	NM_146617.1		258610	33239071	NM_146617.1	Olfr307	NP_666828.1	ILMN_1258690	006400519	S	691	GGCCAGTCTAAAGCGTTTGCCACCTGTATTCCCCACCTAACTGTTTTCAC	7	-	93484164-93484213	7qD3	Mus musculus olfactory receptor 307 (Olfr307), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR219-1	MOR219-1
Mus musculus	RefSeq	ILMN_200297	ILMN_200297	LOC386163	XM_359101.1	XM_359101.1			38081252	XM_359101.1	LOC386163		ILMN_1220706	005490192	S	1088	TTGGTTGTTTCATTGGGTCACTAGAACAAGTAGAGGGAGAGCCTGTACCC										
Mus musculus	RefSeq	ILMN_245068	ILMN_245068	SHF	NM_001013829.2	NM_001013829.2		435684	111185923	NM_001013829.2	Shf	NP_001013851.2	ILMN_3163419	000020095	A	1133	AGTCCTTGTCACCTGCACGGGGGCAGCGGTTCTTACCAAGGACATGATGT	2	-	122175003-122175052	2qE5	Mus musculus Src homology 2 domain containing F (Shf), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-173H17.6	RP23-173H17.6
Mus musculus	RefSeq	ILMN_245068	ILMN_245068	SHF	NM_001013829.2	NM_001013829.2		435684	111185923	NM_001013829.2	Shf	NP_001013851.2	ILMN_3029727	001340390	I	1512	GACTATAAATTGAGGCTGGAGCCGACGCCGGCCGCCTGCGAAAAGCAAAA				2qE5	Mus musculus Src homology 2 domain containing F (Shf), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-173H17.6	RP23-173H17.6
Mus musculus	RefSeq	ILMN_245068	ILMN_245068	SHF	NM_001013829.2	NM_001013829.2		435684	111185923	NM_001013829.2	Shf	NP_001013851.2	ILMN_3102948	000610048	A	1247	AAGGGGAGGGAATCCTGGGCCTTGGAATAAAGGGACTGTGTGGAGCTGGG	2	-	122174889-122174938	2qE5	Mus musculus Src homology 2 domain containing F (Shf), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-173H17.6	RP23-173H17.6
Mus musculus	RefSeq	ILMN_209141	ILMN_243920	PRL3D3	NM_172156.2	NM_172156.2		215029	118130084	NM_172156.2	Prl3d3	NP_742168.1	ILMN_2592926	006590131	S	420	CCAGGAGCTTCTGAGAGTATGGGGAAAAAAGCTGCTGACATTAAGGGCAG	13	+	27252897-27252946	13qA3.1	Mus musculus prolactin family 3, subfamily d, member 3 (Prl3d3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Plig; PL-Ig	Plig; PL-Ig
Mus musculus	RefSeq	ILMN_219543	ILMN_243920	PRL3D3	NM_172156.2	NM_172156.2		215029	118130084	NM_172156.2	Prl3d3	NP_742168.1	ILMN_1247562	003060279	S	483	CTGGAGGGACTTCAGACAATATACAACAGGACTCAGGCTAACATTGAAGA	13	+	27252960-27252989:27254128-27254147	13qA3.1	Mus musculus prolactin family 3, subfamily d, member 3 (Prl3d3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Plig; PL-Ig	Plig; PL-Ig
Mus musculus	RefSeq	ILMN_216192	ILMN_243920	PRL3D3	NM_172156.2	NM_172156.2		215029	118130084	NM_172156.2	Prl3d3	NP_742168.1	ILMN_1225006	006350452	S	450	GCTGCTGACATTAAGGGCAGAAACCTTATAATTCTGGAGGGACTTCAGAC	13	+	27252927-27252976	13qA3.1	Mus musculus prolactin family 3, subfamily d, member 3 (Prl3d3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Plig; PL-Ig	Plig; PL-Ig
Mus musculus	RefSeq	ILMN_243920	ILMN_243920	PRL3D3	NM_172156.2	NM_172156.2		215029	118130084	NM_172156.2	Prl3d3	NP_742168.1	ILMN_2899386	001230445	S	393	CACCTGGTGTCTGCACTGACTGCTCTTCCAGGAGCTTCTGAGAGTATGGG	13	+	27252870-27252919	13qA3.1	Mus musculus prolactin family 3, subfamily d, member 3 (Prl3d3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Plig; PL-Ig	Plig; PL-Ig
Mus musculus	RefSeq	ILMN_215916	ILMN_215916	MYST2	NM_177619.2	NM_177619.2		217127	31341373	NM_177619.2	Myst2	NP_808287.1	ILMN_2665161	003780095	S	2761	GCTTCTGTCTAAGAACTAAGTCCATTCCCTTTCGGGACTTGCCACCATCA	11	-	95136010-95136059	11qD	Mus musculus MYST histone acetyltransferase 2 (Myst2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC56758; Hboa; Hbo1	MGC56758; Hboa; Hbo1
Mus musculus	RefSeq	ILMN_210087	ILMN_210087	RNF2	NM_011277.2	NM_011277.2		19821	141802412	NM_011277.2	Rnf2	NP_035407.1	ILMN_1223375	003420722	S	1975	CCTCTGTACATTTGAGAGTTTACTGTCCCTTTATTATGTATGTTTGATGC	1	-	153317539-153317588	1qG2	Mus musculus ring finger protein 2 (Rnf2), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IDA]; A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IDA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IMP]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IGI]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IMP]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	AU019207; Ring1B; dinG; AI326319; AI450156	AU019207; Ring1B; dinG; AI326319; AI450156
Mus musculus	Riken	ILMN_206054	ILMN_206054	LAMP2	ri|D230032G18|PX00189M16|AK051989|2870					AK051989	Lamp2		ILMN_2577206	002450278	S	2193	GCATTGGCGTTTTGCCTGTATGCATATGTGAGTGAAGGCGCCGGATGCCA						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding the platelet dense granule [goid 31088] [evidence ISO]				
Mus musculus	Riken	ILMN_204220	ILMN_204220	A730058G16RIK	ri|A730058G16|PX00150N06|AK043124|2300					AK043124	A730058G16Rik		ILMN_1217908	001740017	S	2085	GTGGCAGGCACAGGTTTTACCAGGATTCCCAGAGAGTCTATTTTGTTAGC										
Mus musculus	RefSeq	ILMN_213234	ILMN_213234	ATP13A2	NM_029097.1	NM_029097.1		74772	30794173	NM_029097.1	Atp13a2	NP_083373.1	ILMN_1254562	005090368	S	3633	TTGGCTCCGTGAGGTAGTGCAGGCCTTGGAGGGCATGCTGGACACTGGAT	4	+	140562977-140562993:140562994-140563026	4qD3	Mus musculus ATPase type 13A2 (Atp13a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	1110012E06Rik; AA589443	1110012E06Rik; AA589443
Mus musculus	RefSeq	ILMN_198078	ILMN_228513	GM1604B	NM_001033442.2	NM_001033442.2		381059	142384683	NM_001033442.2	Gm1604b	NP_001028614.1	ILMN_2530415	004220440	S	367	CCCACCCCAGAAGATACCACAGAAGAAGGCAAAGGAGACACAACCTCCTC	17	+	7233963-7233988:7283800-7283823	17qA1	Mus musculus gene model 1604B, (NCBI) (Gm1604b), mRNA.					
Mus musculus	RefSeq	ILMN_201336	ILMN_201336	LOC382145	XM_356241.1	XM_356241.1			38091220	XM_356241.1	LOC382145		ILMN_1257576	000150465	S	506	CCCTAGCTGATGGAGTGACCATGCAGTTCTTGCTGGGAAGGGTGATGTTG										
Mus musculus	RefSeq	ILMN_216776	ILMN_216776	SLC35C1	NM_145832.3	NM_145832.3		228368	90962994	NM_145832.3	Slc35c1	NP_665831.1	ILMN_2675249	006510402	S	2455	CCTAGTCCCTTCTGTTTGGCCTTTTGTACCCTCATTTCCTTGGCGTCATG	2	-	92293067-92293116	2qE1	Mus musculus solute carrier family 35, member C1 (Slc35c1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	E430007K15Rik; fuct1	E430007K15Rik; fuct1
Mus musculus	RefSeq	ILMN_216776	ILMN_216776	SLC35C1	NM_145832.3	NM_145832.3		228368	90962994	NM_145832.3	Slc35c1	NP_665831.1	ILMN_3134301	003390328	A	2380	GAATTTGGGGACAGAAGCACTCAGACCACGATGCCCAGCACCACACCCTC	2	-	92293142-92293191	2qE1	Mus musculus solute carrier family 35, member C1 (Slc35c1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	E430007K15Rik; fuct1	E430007K15Rik; fuct1
Mus musculus	RefSeq	ILMN_216776	ILMN_216776	SLC35C1	NM_145832.3	NM_145832.3		228368	90962994	NM_145832.3	Slc35c1	NP_665831.1	ILMN_3057208	003190164	I	62	AGCACCAGGTCCCTGCATCAGCCAGGACACCAGAGCCCAGTCGGGTGGAC	2	-	92300564-92300613	2qE1	Mus musculus solute carrier family 35, member C1 (Slc35c1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	E430007K15Rik; fuct1	E430007K15Rik; fuct1
Mus musculus	RefSeq	ILMN_221313	ILMN_221313	ICAM1	NM_010493.2	NM_010493.2		15894	30172560	NM_010493.2	Icam1	NP_034623.1	ILMN_2896601	001450095	S	2182	GTCTGGGGAAAGATCACATGGGTCGAGGGTTTCTCTACTGGTCAGGATGC	9	+	20832883-20832932	9qA3	Mus musculus intercellular adhesion molecule 1 (Icam1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits [goid 33627] [evidence IDA]; The process by which a T cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 2457] [evidence IDA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Icam-1; MGC6195; Ly-47; MALA-2; CD54	Icam-1; MGC6195; Ly-47; MALA-2; CD54
Mus musculus	RefSeq	ILMN_188971	ILMN_255601	SLC22A6	NM_008766.2	NM_008766.2		18399	31982136	NM_008766.2	Slc22a6	NP_032792.2	ILMN_2708491	000430575	S	2008	CGGAGCCTGCCATTCAGAGAAATGCCTCCCCAAAGGTCACTTCAATAGAC	19	+	8700816-8700865	19qA	Mus musculus solute carrier family 22 (organic anion transporter), member 6 (Slc22a6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISS]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IDA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISA]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IDA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISS]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Oat1; NKT; Orctl1	Oat1; NKT; Orctl1
Mus musculus	RefSeq	ILMN_214749	ILMN_214749	BHLHB4	NM_080641.4	NM_080641.4		140489	142380234	NM_080641.4	Bhlhb4	NP_542372.2	ILMN_1227215	000510576	S	2086	CAGGGAAAACTGGAAACTCAAGTGTTGTTAGCTCTGGGGTCATTACCCAC	2	-	180509470-180509519	2qH4	Mus musculus basic helix-loop-helix domain containing, class B4 (Bhlhb4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46671] [evidence IMP]; The process, occurring after embryonic development, by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The eye is the organ of sight [goid 48050] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	BETA4; A930001L02Rik	BETA4; A930001L02Rik
Mus musculus	RefSeq	ILMN_215434	ILMN_215434	ZFAND2B	NM_026846.1	NM_026846.1		68818	21312111	NM_026846.1	Zfand2b	NP_081122.1	ILMN_2800675	002070170	S	983	AAGCAGGAGTGACGTGGAGGACGCTCCATGGAGCCCGGAGAGGAAGGACA	1	+	75054530-75054579	1qC3	Mus musculus zinc finger, AN1 type domain 2B (Zfand2b), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1110060O18Rik; C81256	1110060O18Rik; C81256
Mus musculus	Riken	ILMN_204889	ILMN_204889	ANGPTL3	ri|A530014E19|PX00140H22|AK040679|2399					AK040679	Angptl3		ILMN_2568390	006220064	S	1989	AAATGGAGGTCCCTAGAACCTGACCCCAATTATGGACCAGGCGGGCAGCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; Any process that decreases the frequency, rate or extent of phospholipase activity, the hydrolysis of a phospholipid [goid 10519] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]		
Mus musculus	RefSeq	ILMN_184482	ILMN_228103	PKP4	NM_026361.2	NM_026361.2		227937	148233272	NM_026361.2	Pkp4	NP_080637.1	ILMN_2418989	004250438	S	3442	GAATCAGAGAGCCTCGCTCTGAATACGATAGGACCCAGCCACCTATGCAG				2qC1.1	Mus musculus plakophilin 4 (Pkp4), transcript variant 1, mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5031422I09Rik; MGC100358; p0071; Armrp; 9430019K17Rik; MGC105166	5031422I09Rik; MGC100358; p0071; Armrp; 9430019K17Rik; MGC105166
Mus musculus	RefSeq	ILMN_234696	ILMN_234696	6230427J02RIK	NM_026597.1	NM_026597.1		68176	58037106	NM_026597.1	6230427J02Rik	NP_080873.1	ILMN_2888375	000110424	S	592	TGCTTGCCTGGAACATTGGCAGGGATTGGAAGCAGAGGACTGGACGGCAG	9	-	107842707-107842756	9qF2	Mus musculus RIKEN cDNA 6230427J02 gene (6230427J02Rik), mRNA.					
Mus musculus	Riken	ILMN_201958	ILMN_201958	0610010K06RIK	ri|0610010K06|R000002I04|AK002489|817					AK002489	0610010K06Rik		ILMN_1243274	001570091	S	499	GAAGGAAGGAAGCCGAGGACCACTGTGAGAGAACGTAGGCCTGATGCGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_209316	ILMN_209316	ANKRD6	NM_080471.3	NM_080471.3		140577	60218878	NM_080471.3	Ankrd6	NP_536719.2	ILMN_2630789	006560156	S	2544	CCAAGTAACGGTGTCCCAGGAGTTGGTTGTCACGCCCAAGGTGGACTTGC	4	-	32892989-32893038	4qA5	Mus musculus ankyrin repeat domain 6 (Ankrd6), transcript variant 2, mRNA.					
Mus musculus	RefSeq	ILMN_209316	ILMN_209316	ANKRD6	NM_080471.3	NM_080471.3		140577	60218878	NM_080471.3	Ankrd6	NP_536719.2	ILMN_1235975	005870056	S	1649	CAGAGCTGAGTTAGGCTCGGTGCAGGATAAAGTGAACGCGAAGCTGGGCC	4	-	32902235-32902284	4qA5	Mus musculus ankyrin repeat domain 6 (Ankrd6), transcript variant 2, mRNA.					
Mus musculus	RefSeq	ILMN_209316	ILMN_209316	ANKRD6	NM_080471.3	NM_080471.3		140577	60218878	NM_080471.3	Ankrd6	NP_536719.2	ILMN_1226317	004810603	S	1179	AGGAAAAGGAGAGAGAGGCTCAAGGAAGAGAGGAGGGCCCAGTCTGTGCC	4	-	32905604-32905653	4qA5	Mus musculus ankyrin repeat domain 6 (Ankrd6), transcript variant 2, mRNA.					
Mus musculus	RefSeq	ILMN_196470	ILMN_332329	MLLT4	NM_010806.1	NM_010806.1		17356	145587091	NM_010806.1	Mllt4	NP_034936.1	ILMN_2593230	006940136	S	495	ATCGAGAGGGTCGATTCGTCCTTAAGAACGAGAATGACGCCATTCCTGCC				17qA1-qA2	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 (Mllt4), mRNA.	An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	I-afadin; Afadin; Gm314; 5033403D15Rik; S-afadin; AF6	I-afadin; Afadin; Gm314; 5033403D15Rik; S-afadin; AF6
Mus musculus	RefSeq	ILMN_193027	ILMN_332329	MLLT4	NM_010806.1	NM_010806.1		17356	145587091	NM_010806.1	Mllt4	NP_034936.1	ILMN_2493464	001260519	S	7119	GCCGTCCCTGGACAGTGAGGTCAGATGTGAATACATATTGTAAGAGCACG				17qA1-qA2	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 (Mllt4), mRNA.	An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	I-afadin; Afadin; Gm314; 5033403D15Rik; S-afadin; AF6	I-afadin; Afadin; Gm314; 5033403D15Rik; S-afadin; AF6
Mus musculus	RefSeq	ILMN_196470	ILMN_332329	MLLT4	NM_010806.1	NM_010806.1		17356	145587091	NM_010806.1	Mllt4	NP_034936.1	ILMN_1239771	001500270	S	2759	CTGCAGCTTCAAGCCTTGTTACAAAATTACCACTGTGCACCCGATGAGCC				17qA1-qA2	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 (Mllt4), mRNA.	An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	I-afadin; Afadin; Gm314; 5033403D15Rik; S-afadin; AF6	I-afadin; Afadin; Gm314; 5033403D15Rik; S-afadin; AF6
Mus musculus	RefSeq	ILMN_213311	ILMN_213311	3110057O12RIK	NM_026622.2	NM_026622.2		269423	142348645	NM_026622.2	3110057O12Rik	NP_080898.1	ILMN_1259606	004890390	S	3952	CGACTCAGCCCTAAAGACCCTGAAGAAGTAGTTCTGTAGTTAGACTTCAT	3	+	40741870-40741919	3qB	Mus musculus RIKEN cDNA 3110057O12 gene (3110057O12Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			2310068E01Rik; AI645591; 4732404H23	2310068E01Rik; AI645591; 4732404H23
Mus musculus	RefSeq	ILMN_213311	ILMN_213311	3110057O12RIK	NM_026622.2	NM_026622.2		269423	142348645	NM_026622.2	3110057O12Rik	NP_080898.1	ILMN_2635871	005390458	S	439	CCTAGATGGACACTTTGTTTCTCCCATGGCCCACTATGTGCCTGGTATCA	3	+	40714451-40714500	3qB	Mus musculus RIKEN cDNA 3110057O12 gene (3110057O12Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			2310068E01Rik; AI645591; 4732404H23	2310068E01Rik; AI645591; 4732404H23
Mus musculus	RefSeq	ILMN_216077	ILMN_216077	T	NM_009309.2	NM_009309.2		20997	118130357	NM_009309.2	T	NP_033335.1	ILMN_1244340	004010546	S	1365	GGCCCAAAGCCTCCTCATAGCCTCGTGGACACCTGTGTCACCCCCATCTA	17	+	8634680-8634729	17qA1	Mus musculus brachyury (T), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The process by which the anatomical structures of the neural plate are generated and organized. Morphogenesis pertains to the creation of form. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue [goid 1839] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column [goid 30903] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column [goid 30903] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tl3; Low; Lr; Bra; T1; me75; cou; Tl2	Tl3; Low; Lr; Bra; T1; me75; cou; Tl2
Mus musculus	Riken	ILMN_207074	ILMN_207074	A530088I07RIK	ri|A530088I07|PX00660C16|AK080244|3460					AK080244	A530088I07Rik		ILMN_2584843	004760634	S	2750	GATGCAGGAAGATGACAGGGAAGGTCACACTTTATAGGCAGCGATAGGGA										
Mus musculus	Riken	ILMN_204706	ILMN_204706	SPARC	ri|A530047A09|PX00141E01|AK040931|1793					AK040931	SPARC		ILMN_2567020	002120541	S	1652	GTGGAAAAAGCAAAAGGCCCATGGAAACTCCGAGGAGACAGGACTGACCG										
Mus musculus	RefSeq	ILMN_211946	ILMN_211946	EG210853	NM_177596.3	NM_177596.3		210853	118130448	NM_177596.3	EG210853	NP_808264.1	ILMN_1217199	004280440	S	2310	CCTGGAGACTGAAATGATCTATTTCAAAGAGAAGCTGTGAAATACATGCC	17	-	22281625-22281674	17qA3.3	Mus musculus predicted gene, EG210853 (EG210853), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	6720451E15; MGC141638	6720451E15; MGC141638
Mus musculus	MEEBO	ILMN_192395	ILMN_192395	TEAD4	scl28368.14.1_120				46395345	NM_011567	Tead4		ILMN_2487695	004760750	S	20	AAATTTCTTTAAAAAGTGTCTGGAACTTGGCTTTTGTACATACACTTAGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]; The cell fate commitment of precursor cells that will become trophectoderm cells [goid 1830] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IGI]		
Mus musculus	MEEBO	ILMN_192395	ILMN_192395	TEAD4	scl28368.14.1_120				46395345	NM_011567	Tead4		ILMN_2711978	001050014	S	374	CATGTCGTCCGCACAGATCGTCTCGGCCACAGCCTTCCACAGTAAAATGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]; The cell fate commitment of precursor cells that will become trophectoderm cells [goid 1830] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IGI]		
Mus musculus	RefSeq	ILMN_227694	ILMN_227694	TRO	NM_001002272.2	NM_001002272.2		56191	110618254	NM_001002272.2	Tro	NP_001002272.1	ILMN_3129213	006770411	A	6344	CCTCTAGCCATGGTGGCTGTGGCTTCCCTTACGGCTAGTGAAGATTCAGG	X	-	147080063-147080064:147080237-147080247:147080248-147080284	XqF3	Mus musculus trophinin (Tro), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IDA]		Maged3l; Maged3; Tnn; magphinin; AA409408; Trol	Maged3l; Maged3; Tnn; magphinin; AA409408; Trol
Mus musculus	RefSeq	ILMN_192006	ILMN_227694	TRO	NM_001002272.2	NM_001002272.2		56191	110618254	NM_001002272.2	Tro	NP_001002272.1	ILMN_2484147	006380202	S	6128	GCTTTGGAGGACCAAGCACTGGAGGTGGCTTTGGAGGACCAAGCACTGGA	X	-	147080451-147080500	XqF3	Mus musculus trophinin (Tro), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IDA]		Maged3l; Maged3; Tnn; magphinin; AA409408; Trol	Maged3l; Maged3; Tnn; magphinin; AA409408; Trol
Mus musculus	RefSeq	ILMN_227694	ILMN_227694	TRO	NM_001002272.2	NM_001002272.2		56191	110618254	NM_001002272.2	Tro	NP_001002272.1	ILMN_3052685	001070360	I	5837	CCAGCTTCAACAGAGGACTGAATACCATCATTGGCTTTGGCAGTGGTTCC	X	-	147080742-147080791	XqF3	Mus musculus trophinin (Tro), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IDA]		Maged3l; Maged3; Tnn; magphinin; AA409408; Trol	Maged3l; Maged3; Tnn; magphinin; AA409408; Trol
Mus musculus	RefSeq	ILMN_194880	ILMN_227694	TRO	NM_001002272.2	NM_001002272.2		56191	110618254	NM_001002272.2	Tro	NP_001002272.1	ILMN_2510474	001470398	S	6400	CCCCCTGTTTACAGATAACGCTAACTGCAACAATACTTCCCATGGAGCCA	X	-	147080007-147080056	XqF3	Mus musculus trophinin (Tro), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IDA]		Maged3l; Maged3; Tnn; magphinin; AA409408; Trol	Maged3l; Maged3; Tnn; magphinin; AA409408; Trol
Mus musculus	RefSeq	ILMN_203232	ILMN_227694	TRO	NM_001002272.2	NM_001002272.2		56191	110618254	NM_001002272.2	Tro	NP_001002272.1	ILMN_1235530	000060224	S	1570	CGGATCAGGAGAGGGTCTAGGGCTCGAAAGGCTGCCAATAAGAATCGGGC	X	-	147088700-147088749	XqF3	Mus musculus trophinin (Tro), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IDA]		Maged3l; Maged3; Tnn; magphinin; AA409408; Trol	Maged3l; Maged3; Tnn; magphinin; AA409408; Trol
Mus musculus	MEEBO	ILMN_190851	ILMN_190851	9626958_317	9626958_317						9626958_317		ILMN_2473811	005220220	S	14	AACTAACCAATCAGTTCGCTTCTCGCTTCTGTTCGCGCGCTTCTGCTCCC										
Mus musculus	RefSeq	ILMN_216221	ILMN_216221	4930578C19RIK	NM_175228.2	NM_175228.2		75905	31340655	NM_175228.2	4930578C19Rik	NP_780437.1	ILMN_2668642	006060288	S	1668	GGCAAGTAAGAAAGTCCCATATGTTGGGAGGCTAGTGTAGGTAGAGGGCA	X	-	17575467-17575516	XqA1.3	Mus musculus RIKEN cDNA 4930578C19 gene (4930578C19Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	Riken	ILMN_203251	ILMN_203251	8030401N12RIK	ri|8030401N12|PX00102F08|AK033081|1893					AK033081	8030401N12Rik		ILMN_2555867	003130376	S	1373	CAGCCATCAGTAACTTCCAGCGCTTACAGGCTGCGTAATAGAGCTACAGC										
Mus musculus	Riken	ILMN_202324	ILMN_202324	4933425K02RIK	ri|4930434P15|PX00031I17|AK015318|1411					AK015318	4933425K02Rik		ILMN_1215665	006660739	S	937	GTGCACCTCAGATGGCAAGCTCTGATCTGAGCAATATGTAGACAGAACAG										
Mus musculus	MEEBO	ILMN_191346	ILMN_191346	DHRS9	scl20830.5_145				31342065	NM_175512	Dhrs9		ILMN_2631251	000520309	S	33	GCAGACCGCAGGCACCTTGAGAGGATCAGCTTGACGGAGCTGCACTTCCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216453	ILMN_216453	EIF3B	NM_133916.2	NM_133916.2		27979	118129791	NM_133916.2	Eif3b	NP_598677.1	ILMN_2671259	001850685	S	2078	CTTCCAAGGTCGCCTTCTGCAGAAGAACAACAAGGACCGCTTCTGCCAGC	5	+	140916966-140917015	5qG2	Mus musculus eukaryotic translation initiation factor 3, subunit B (Eif3b), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	EIF3-P116; D5Wsu45e; AL033334; EIF3-P110; AW208965; AL033369; PRT1; EIF3-ETA; AL033316	EIF3-P116; D5Wsu45e; AL033334; EIF3-P110; AW208965; AL033369; PRT1; EIF3-ETA; AL033316
Mus musculus	RefSeq	ILMN_216453	ILMN_216453	EIF3B	NM_133916.2	NM_133916.2		27979	118129791	NM_133916.2	Eif3b	NP_598677.1	ILMN_1233746	004390471	S	235	TGAGGGCCAAGCCGGCGGCCCAATCCGAAGAGGAAACGGCGACGAGTCCG	5	+	140895493-140895542	5qG2	Mus musculus eukaryotic translation initiation factor 3, subunit B (Eif3b), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	EIF3-P116; D5Wsu45e; AL033334; EIF3-P110; AW208965; AL033369; PRT1; EIF3-ETA; AL033316	EIF3-P116; D5Wsu45e; AL033334; EIF3-P110; AW208965; AL033369; PRT1; EIF3-ETA; AL033316
Mus musculus	RefSeq	ILMN_217296	ILMN_217296	ANKRD40	NM_027799.2	NM_027799.2		71452	125656160	NM_027799.2	Ankrd40	NP_082075.2	ILMN_2681592	002370608	S	1394	TGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGG	11	+	94201062-94201111	11qD	Mus musculus ankyrin repeat domain 40 (Ankrd40), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gcap15; MGC29030; 5530600A18Rik; RP23-65I14.1; 1110011C06Rik	Gcap15; MGC29030; 5530600A18Rik; RP23-65I14.1; 1110011C06Rik
Mus musculus	Riken	ILMN_206725	ILMN_206725	BUB1	ri|C230061K18|PX00175H16|AK082540|1138					AK082540	Bub1		ILMN_2582233	000060767	S	866	CCTCTTCATAGGCCCAGGAAATCCCTATTTTGGATCACATTTGCCTGGAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196417	ILMN_326654	LOC100047738	XM_001478788.1	XM_001478788.1		100047738	149249189	XM_001478788.1	LOC100047738	XP_001478838.1	ILMN_1252714	003290554	S	4196	CCCCCAGAAACCCTGGGGTAGGCTGTCTGACCATTTACACATAGGAAATG					PREDICTED: Mus musculus similar to DENN/MADD domain containing 1A (LOC100047738), mRNA.					
Mus musculus	Riken	ILMN_202786	ILMN_202786	4933413H15RIK	ri|4933413H15|PX00020M21|AK030186|2239					AK030186	4933413H15Rik		ILMN_1248552	006760176	S	1858	GGAGGGTCTCTGTACACCCAGGAAGTGCTGCAGGTATCTCTCTCAAAGGC										
Mus musculus	RefSeq	ILMN_186822	ILMN_228148	TMOD4	NM_016712.2	NM_016712.2		50874	118131109	NM_016712.2	Tmod4	NP_057921.1	ILMN_2519313	002030397	S	1099	TGGGACGCACAGATCCTCATCTCTCTCTCCTTTCCTGTAAATAAAATCCC	3	+	94933069-94933118	3qF2.1	Mus musculus tropomodulin 4 (Tmod4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]	Sk-Tmod; MTMOD	Sk-Tmod; MTMOD
Mus musculus	RefSeq	ILMN_186822	ILMN_228148	TMOD4	NM_016712.2	NM_016712.2		50874	118131109	NM_016712.2	Tmod4	NP_057921.1	ILMN_2488846	004250148	S	953	CGTCTATTGTCCGCTTCGGGTACCACTTTACACAACAAGGACCACGAGCT	3	+	94932580-94932629	3qF2.1	Mus musculus tropomodulin 4 (Tmod4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]	Sk-Tmod; MTMOD	Sk-Tmod; MTMOD
Mus musculus	RefSeq	ILMN_186822	ILMN_228148	TMOD4	NM_016712.2	NM_016712.2		50874	118131109	NM_016712.2	Tmod4	NP_057921.1	ILMN_2438793	004210446	S	700	GTCCGGAGCTTCAGTCTGGTGGCCACAAAGAGTGGTGACCCAATCGCCAA	3	+	94931783-94931832	3qF2.1	Mus musculus tropomodulin 4 (Tmod4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]	Sk-Tmod; MTMOD	Sk-Tmod; MTMOD
Mus musculus	RefSeq	ILMN_207452	ILMN_207452	PXN	NM_133915.1	NM_133915.1			22902121	NM_133915.1	Pxn		ILMN_1260474	001050180	I	832	ATGCAGGGCCTGGAACAGAGAGTGGATGGAGAGCGGCCGTGGGCAGCCGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence TAS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]	Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with the BH4 domain of a protein of the Bcl-2 family. All anti-apoptotic proteins contain BH1 and BH2 domains; some also contain an additional N-terminal BH4 domain, which is almost never seen in pro-apoptotic proteins. Loss of the BH4 domain can diminish or abrogate anti-apoptotic function or even impart outright death-promoting properties to the protein [goid 51435] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220801	ILMN_220801	CYPT6	NM_025738.2	NM_025738.2		66742	114842378	NM_025738.2	Cypt6	NP_080014.2	ILMN_2918229	006380598	S	1	CAGTCTCTGGAGAGCTCTGCTATGGCTCAGATGGCCAAGAAAGTCCACTG	X	+	16099998-16100018:16100019-16100047	XqA1.2	Mus musculus cysteine-rich perinuclear theca 6 (Cypt6), mRNA.				TISP55; MGC74194; Cypt5; Ckt1r3; 4931420D14Rik; Cypt1	TISP55; MGC74194; Cypt5; Ckt1r3; 4931420D14Rik; Cypt1
Mus musculus	MEEBO	ILMN_218412	ILMN_218412	AY036118	scl00170798.1_35	NM_133243.1			18875413	NM_133243.1	AY036118		ILMN_2695504	003840564	S	830	GTATAGCGACGGCCGGTGTGTACAAAGGGAAGGAACTAATTAAACCCAGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_185906	ILMN_185906	ALKBH	scl42201.8_224				38050497	XM_127049	Alkbh		ILMN_2742879	002850600	S	349	AGTGCCTTAAGTTGTACTCCCAGAAACCTAATGTGTGTAACCTGGACAAG										
Mus musculus	MEEBO	ILMN_185906	ILMN_185906	ALKBH	scl42201.8_224				38050497	XM_127049	Alkbh		ILMN_2431007	006860209	S	18	AGTCTCTAGGGTGTTTCATTAGCTGTTTTCTCCATGAATAAAGTTACTCT										
Mus musculus	MEEBO	ILMN_222847	ILMN_222847	SRST	scl0020819.1_94	NM_009276.1			6678138	NM_009276.1	Srst		ILMN_2755706	004900382	S	974	TCTGAAGGCTCTATATCTATACTGACTTCTAGTAGACGATCCAGCTGACA										
Mus musculus	RefSeq	ILMN_235582	ILMN_235582	ANG4	NM_177544.2	NM_177544.2		219033	31343559	NM_177544.2	Ang4	NP_808212.1	ILMN_2819112	006420243	S	498	CCTGTCCACTTCGATGAGTCTTTTATCAGTCCGTAGACAGCAGGCCCCTG	14	-	50685990-50686005:50686006-50686039	14qC2	Mus musculus angiogenin, ribonuclease A family, member 4 (Ang4), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]	An immune response against bacteria mediated through a body fluid [goid 19731] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Rnase5d	Rnase5d
Mus musculus	RefSeq	ILMN_213114	ILMN_239986	AIFM2	NM_001039194.2	NM_001039194.2		71361	142359615	NM_001039194.2	Aifm2	NP_001034283.1	ILMN_1216842	001740674	S	963	AAGATGGCCTACCACGCTGGCCTGCATGCCAATGTTGCCGTGGCCAACAT	10	+	61198313-61198362	10qB4	Mus musculus apoptosis-inducing factor, mitochondrion-associated 2 (Aifm2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PRG3; Amid; D730001I10Rik; 5430437E11Rik	PRG3; Amid; D730001I10Rik; 5430437E11Rik
Mus musculus	RefSeq	ILMN_213114	ILMN_239986	AIFM2	NM_001039194.2	NM_001039194.2		71361	142359615	NM_001039194.2	Aifm2	NP_001034283.1	ILMN_2633802	003780431	S	442	TTAACGAGGTGTCCTGCCAGCAGGCAGCCATCCAGGCCTATGAGGACATG	10	+	61190456-61190505	10qB4	Mus musculus apoptosis-inducing factor, mitochondrion-associated 2 (Aifm2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PRG3; Amid; D730001I10Rik; 5430437E11Rik	PRG3; Amid; D730001I10Rik; 5430437E11Rik
Mus musculus	Riken	ILMN_203285	ILMN_203285	POSH-PENDING	ri|9530026H17|PX00111B16|AK035372|1665					AK035372	Posh-pending		ILMN_1241640	006840019	S	1586	CAGTTGCATAAAGACATCTGAAGTGGGGGGGCACGGGGTGCTGACCTGGA										
Mus musculus	RefSeq	ILMN_213917	ILMN_213917	GABARAPL2	NM_026693.2	NM_026693.2		93739	31542872	NM_026693.2	Gabarapl2	NP_080969.2	ILMN_1219431	006590669	S	2386	GAGACTGGCCTAGGCTGTAAAAAGGCACTTTATTGTTTGAGTAGCATAGG	8	+	114841944-114841993	8qE1	Mus musculus gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2 (Gabarapl2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC102013; AI173605; GATE-16; 0610012F20Rik; 2900019O08Rik; Gef2	MGC102013; AI173605; GATE-16; 0610012F20Rik; 2900019O08Rik; Gef2
Mus musculus	RefSeq	ILMN_213917	ILMN_213917	GABARAPL2	NM_026693.2	NM_026693.2		93739	31542872	NM_026693.2	Gabarapl2	NP_080969.2	ILMN_2642197	005910189	S	883	ATGTTGGACTGAGCTAATCTATTCTTCTTTCTGAGACTATTAAGGTAAAT	8	+	114839510-114839559	8qE1	Mus musculus gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2 (Gabarapl2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC102013; AI173605; GATE-16; 0610012F20Rik; 2900019O08Rik; Gef2	MGC102013; AI173605; GATE-16; 0610012F20Rik; 2900019O08Rik; Gef2
Mus musculus	Riken	ILMN_203628	ILMN_203628	E130112E08RIK	ri|E130112E08|PX00091L02|AK053583|4179					AK053583	E130112E08Rik		ILMN_1227100	003870427	S	4052	GTGGTAGAGTGCTTGCCCCTGGGTTCAGTCCTCAGCTCTGGTAGAAAAAA										
Mus musculus	RefSeq	ILMN_199725	ILMN_199725	LOC383872	XM_357303.1	XM_357303.1			38076590	XM_357303.1	LOC383872		ILMN_1242329	006660646	S	92	GGGAATCCGAAGAAAGCGAAGCTGAGTTTGCACCTCACTCTACATTCAGG										
Mus musculus	RefSeq	ILMN_212002	ILMN_261822	GPR160	XM_921012.3	XM_921012.3		71862	149250931	XM_921012.3	Gpr160	XP_926105.1	ILMN_2621649	003520747	S	1692	GGGGCAGATGCCAAGTAGTGCTGAGGATACATTAGCACAGCAGAATGTTT				3qA3	PREDICTED: Mus musculus G protein-coupled receptor 160, transcript variant 6 (Gpr160), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188902	ILMN_188902	POLR2A	scl40020.28_128				6677794	NM_009089	Polr2a		ILMN_2456696	006660468	S	19	CTGGGTCCCTTGTACATAACTCCTTGTGACAAAACCCTCTGGAAGTTCTG						A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213383	ILMN_213383	KCNA3	NM_008418.1	NM_008418.1		16491	6680515	NM_008418.1	Kcna3	NP_032444.1	ILMN_2636525	002360411	S	1421	ACTCCACTCTGAGTAAGTCGGAGTATATGGTGATCGAAGAGGGGGGTATG	3	+	106840761-106840810	3qF2.3	Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 3 (Kcna3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Mk-3; Kca1-3; Kv1.3	Mk-3; Kca1-3; Kv1.3
Mus musculus	RefSeq	ILMN_217420	ILMN_217420	RHOA	NM_016802.3	NM_016802.3		11848	46195812	NM_016802.3	Rhoa	NP_058082.2	ILMN_2728181	000290491	S	2059	CTAAACATTTTTCTGTACCAGTTAATTTTTCCAACTAATAGAATAAAGGC	9	+	108240203-108240252	9qF2	Mus musculus ras homolog gene family, member A (Rhoa), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence TAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts [goid 43149] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IGI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Arha; Arha1; Arha2	Arha; Arha1; Arha2
Mus musculus	Riken	ILMN_202467	ILMN_202467	5830431I15RIK	ri|5830431I15|PX00039A15|AK017959|1133					AK017959	5830431I15Rik		ILMN_2549835	005080619	S	682	CACATGCTCCTGTTGGCATTCTCGCAGAACCAGTCAAGCCGAGGGCTAAC										
Mus musculus	MEEBO	ILMN_192757	ILMN_192757	AIG1	scl38181.9.1_28				13384847	NM_025446	Aig1		ILMN_2491054	004830053	S	10	CCCTCTTTTCTAGTTTTAAAATTAAAGTTGGTCATTGAATTTTCATTTCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_207371	ILMN_312693	ENSMUSG00000043795	XM_001480835.1	XM_001480835.1		677289	149258308	XM_001480835.1	ENSMUSG00000043795	XP_001480885.1	ILMN_1254394	002630014	S	3678	CCAGAAGAGCCAGGTGTAACAAGACTCAGCAAGGATTGAGCTGGTAGCCC	7	-	149677046-149677095	7qF5	PREDICTED: Mus musculus predicted gene, ENSMUSG00000043795 (ENSMUSG00000043795), mRNA.					
Mus musculus	RefSeq	ILMN_218085	ILMN_312693	ENSMUSG00000043795	XM_001480835.1	XM_001480835.1		677289	149258308	XM_001480835.1	ENSMUSG00000043795	XP_001480885.1	ILMN_1259400	000380482	S	482	TGACCAACCCTCCAACTCTGCTTCTCACCATCAGCTAAAGGGACCAGTCC	7	-	149680242-149680291	7qF5	PREDICTED: Mus musculus predicted gene, ENSMUSG00000043795 (ENSMUSG00000043795), mRNA.					
Mus musculus	RefSeq	ILMN_213952	ILMN_213952	4932412H11RIK	NM_172879.1	NM_172879.1		242838	27370337	NM_172879.1	4932412H11Rik	NP_766467.1	ILMN_2896857	006370736	S	2678	CTAAACATGGCAAGCTCAGCAAACAACATGCCTGTAAGGCCCACTACTCC	5	+	3871749-3871788:3872369-3872378	5qA1	Mus musculus RIKEN cDNA 4932412H11 gene (4932412H11Rik), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215549	ILMN_215549	2310002L09RIK	NM_027104.2	NM_027104.2		71886	142366869	NM_027104.2	2310002L09Rik	NP_081380.1	ILMN_1214119	004250292	S	741	TATGCCATAGCCAGAGTCAGTAGGACCTGCATATGTCGGACCCATCCAAG	4	-	73585442-73585482:73585483-73585491	4qC3	Mus musculus RIKEN cDNA 2310002L09 gene (2310002L09Rik), mRNA.				AV083437; 2310003M01Rik; MGC144294; MGC144293	AV083437; 2310003M01Rik; MGC144294; MGC144293
Mus musculus	RefSeq	ILMN_203069	ILMN_313108	C330011M18RIK	XR_035219.1	XR_035219.1		442802	149258960	XR_035219.1	C330011M18Rik		ILMN_1228852	006560315	S	1716	GGTGACCACCTCCTAGCACTAGAGATTACAGGGGTGTACCACCACACCTT	8	-	86589362-86589411	8qC3	PREDICTED: Mus musculus RIKEN cDNA C330011M18 gene (C330011M18Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_198044	ILMN_198044	LOC269213	XM_193257.2	XM_193257.2			38080892	XM_193257.2	LOC269213		ILMN_1258685	001300379	S	760	GCAGATGCTGTCATGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGG										
Mus musculus	RefSeq	ILMN_201345	ILMN_201345	LOC382500	XM_356535.1	XM_356535.1			38091577	XM_356535.1	LOC382500		ILMN_2541966	001090372	S	63	GAAGAATGTGAACTCCAAGATTGGTGTCGAACCCCATTGGCCCAAGATAG										
Mus musculus	RefSeq	ILMN_218894	ILMN_218894	OLFR1387	NM_146473.1	NM_146473.1		258465	33238939	NM_146473.1	Olfr1387	NP_666684.1	ILMN_2701603	007100717	S	586	GCTAAGATGTTTGTGGCTCGAACAATTGTCTTGGTGTGCCCTGCAGTACT	11	+	49273768-49273817	11qB1.2	Mus musculus olfactory receptor 1387 (Olfr1387), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-22; RP23-58E13.8	MOR256-22; RP23-58E13.8
Mus musculus	Riken	ILMN_202929	ILMN_202929	5330440O04RIK	ri|5330440O04|PX00054H12|AK030642|2193					AK030642	5330440O04Rik		ILMN_1214478	006020392	S	1907	ACAAGGGTGCCAGTGTTATTAATCTGGGTGCCTGTTCCTTTGGGGGCACC										
Mus musculus	Riken	ILMN_203499	ILMN_203499	C430018M18RIK	ri|C430018M18|PX00078L08|AK049518|3676					AK049518	C430018M18Rik		ILMN_1214695	004570121	S	3544	TACAGAGTGAAAGCCTGTCTCAAAGGGGGGGTGGGGGAGGTTAGGACTGC										
Mus musculus	RefSeq	ILMN_184468	ILMN_260177	UBE3A	NM_001033962.1	NM_001033962.1		22215	76880499	NM_001033962.1	Ube3a	NP_001029134.1	ILMN_2462128	000650750	S	3028	TACTTCCGGAATATTCAAGCAAAGAAAAACTTAAAGAGAGATTGTTGAAG	7	+	66560215-66560264	7qC	Mus musculus ubiquitin protein ligase E3A (Ube3a), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	KIAA4216; Hpve6a; A130086L21Rik; 5830462N02Rik; mKIAA4216; 4732496B02	KIAA4216; Hpve6a; A130086L21Rik; 5830462N02Rik; mKIAA4216; 4732496B02
Mus musculus	RefSeq	ILMN_184167	ILMN_260177	UBE3A	NM_001033962.1	NM_001033962.1		22215	76880499	NM_001033962.1	Ube3a	NP_001029134.1	ILMN_2506499	001230468	S	179	CCACGCAGCTGTTCACCGCCTCGTTACGCTTCTCTTCCGTCGACCTGTCG	7	+	66484300-66484349	7qC	Mus musculus ubiquitin protein ligase E3A (Ube3a), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	KIAA4216; Hpve6a; A130086L21Rik; 5830462N02Rik; mKIAA4216; 4732496B02	KIAA4216; Hpve6a; A130086L21Rik; 5830462N02Rik; mKIAA4216; 4732496B02
Mus musculus	MEEBO	ILMN_192491	ILMN_192491	AU014947	scl099168.1_89						AU014947		ILMN_2488581	006560768	S	18	TTATATTTCAATTTTAAGGTTTCCTTATCTGTATTATAGTAAATTCATGA										
Mus musculus	RefSeq	ILMN_210207	ILMN_210207	CASC1	NM_177222.3	NM_177222.3		320662	42475545	NM_177222.3	Casc1	NP_796196.2	ILMN_2906549	000870202	S	2053	GGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAG	6	-	145140005-145140054	6qG3	Mus musculus cancer susceptibility candidate 1 (Casc1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Las1; A230084G12Rik	Las1; A230084G12Rik
Mus musculus	RefSeq	ILMN_210207	ILMN_210207	CASC1	NM_177222.3	NM_177222.3		320662	42475545	NM_177222.3	Casc1	NP_796196.2	ILMN_2603253	000830048	S	607	GGTCAATTCTGCGCCTACAAGAGCTGCTCAGCCTGAAGATCAACGTGGCC	6	-	145151476-145151525	6qG3	Mus musculus cancer susceptibility candidate 1 (Casc1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Las1; A230084G12Rik	Las1; A230084G12Rik
Mus musculus	RefSeq	ILMN_210207	ILMN_210207	CASC1	NM_177222.3	NM_177222.3		320662	42475545	NM_177222.3	Casc1	NP_796196.2	ILMN_2906552	004180215	S	2156	CACCTTGTACCACATGATGAAGGACTTCGCCTCCCCCGTGGCAATGGAGA	6	-	145139902-145139951	6qG3	Mus musculus cancer susceptibility candidate 1 (Casc1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Las1; A230084G12Rik	Las1; A230084G12Rik
Mus musculus	Riken	ILMN_201693	ILMN_201693	RFC3	ri|2810416I22|ZX00035E01|AK013095|635					AK013095	Rfc3		ILMN_2543834	003310288	S	74	GAGCTCCCTTGCCCGGCTGGACTATCATAAGGAACAGGCAGCACACGTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209783	ILMN_209783	4933430I17RIK	NM_177607.3	NM_177607.3		214106	142366749	NM_177607.3	4933430I17Rik	NP_808275.1	ILMN_2599174	006860373	S	1403	GACCGTAACCTCAAGAACCTTTCTGCAATGATGGACGGCATCGGCTGGAA	4	+	62208647-62208696	4qB3	Mus musculus RIKEN cDNA 4933430I17 gene (4933430I17Rik), mRNA.				bN189G18.7	bN189G18.7
Mus musculus	Riken	ILMN_203351	ILMN_203351	B830010O15RIK	ri|B830010O15|PX00072H22|AK046800|2509					AK046800	B830010O15Rik		ILMN_1258981	000290301	S	615	ACAGTGTCTGCGGGCTCCTGTTACAAGGCAGCCAAGGGCAGTTTCCACTA										
Mus musculus	RefSeq	ILMN_197476	ILMN_326326	LOC100045437	XM_001474277.1	XM_001474277.1		100045437	149250576	XM_001474277.1	LOC100045437	XP_001474327.1	ILMN_1228965	006350364	S	412	TCTTACTGTTGGGCTCCTAGACACTCAACGATGCAGGAGGAGGCATTGCC					PREDICTED: Mus musculus hypothetical protein LOC100045437 (LOC100045437), mRNA.					
Mus musculus	RefSeq	ILMN_202194	ILMN_235660	DAAM1	NM_172464.2	NM_172464.2		208846	78191778	NM_172464.2	Daam1	NP_766052.2	ILMN_2547737	003890576	S	3415	GCGCCGTAGCAGCCCTTTTGGGGTGACCAGAACTTTCCATTACACTGCCT	12	+	73090900-73090949	12qC3	Mus musculus dishevelled associated activator of morphogenesis 1 (Daam1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	E130308H01; 1700066F09Rik; AI503486; 2310028E21Rik; mKIAA0666	E130308H01; 1700066F09Rik; AI503486; 2310028E21Rik; mKIAA0666
Mus musculus	RefSeq	ILMN_195213	ILMN_235660	DAAM1	NM_172464.2	NM_172464.2		208846	78191778	NM_172464.2	Daam1	NP_766052.2	ILMN_1246330	006980309	S	5689	AGCTTAGTAGCTGGAACCACTTAGTCTTTAGGTTGCAAGACTGTTGTTAC	12	+	73093174-73093223	12qC3	Mus musculus dishevelled associated activator of morphogenesis 1 (Daam1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	E130308H01; 1700066F09Rik; AI503486; 2310028E21Rik; mKIAA0666	E130308H01; 1700066F09Rik; AI503486; 2310028E21Rik; mKIAA0666
Mus musculus	RefSeq	ILMN_196598	ILMN_329789	EG664849	NR_003376.1	NR_003376.1		664849	133778980	NR_003376.1	EG664849		ILMN_1258896	003450168	S	658	ATGGATGGCCAGAGATGAGACTGGACGCCACTGGGCTGGAGCAGGGGGCA	7	+	67300972-67301021	7qC	Mus musculus predicted gene, EG664849 (EG664849) on chromosome 7.					
Mus musculus	RefSeq	ILMN_199616	ILMN_199616	LOC382805	XM_356685.1	XM_356685.1			38075119	XM_356685.1	LOC382805		ILMN_2535866	006770594	S	340	GCTCCGAGTGAAATGCCTTTCAGCGTTTCCTTGGTTACCGGAGGTGGCAG										
Mus musculus	RefSeq	ILMN_200968	ILMN_200968	LOC384667	XM_357778.1	XM_357778.1			38087482	XM_357778.1	LOC384667		ILMN_1237756	004900609	S	1121	TCCTACTGCTATGCCACTTCCTGTTTTCTAAGAGCAACTCTGCCTACATC										
Mus musculus	MEEBO	ILMN_189529	ILMN_189529	9430040K09RIK	scl49295.1_307						9430040K09Rik		ILMN_1241573	001570411	S	14	CCTTGATGCTCATAGGAGATGCTGCCTAAAGAAGGGGTGGGATGCAGGCC										
Mus musculus	RefSeq	ILMN_209084	ILMN_209084	FLII	NM_022009.1	NM_022009.1		14248	11528489	NM_022009.1	Flii	NP_071292.1	ILMN_2980063	004220050	S	3819	TGGAGCACGTTCCGCCAAGCCCCAGCCTAAGCAGTACCTATGACCTCAGA	11	-	60527794-60527814:60527815-60527843	11qB2	Mus musculus flightless I homolog (Drosophila) (Flii), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]; The process by which an actin filament is broken down into smaller filaments [goid 51014] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Fliih; Fli1; 3632430F08Rik	Fliih; Fli1; 3632430F08Rik
Mus musculus	RefSeq	ILMN_223839	ILMN_249681	TMEM115	NM_019704.2	NM_019704.2		56395	118130595	NM_019704.2	Tmem115	NP_062678.1	ILMN_1218014	005900379	S	1595	TGAGTGCAGTTCTTCTACTCCCATGCCTTCCCGATCCGTCTCGGCTACTG	9	+	107440405-107440454	9qF1	Mus musculus transmembrane protein 115 (Tmem115), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C78915; Pl6; Pp6	C78915; Pl6; Pp6
Mus musculus	RefSeq	ILMN_218242	ILMN_218242	TSR2	NM_175146.2	NM_175146.2		69499	31341017	NM_175146.2	Tsr2	NP_780355.1	ILMN_2693454	003400592	S	126	CCAGGAGAAGGCCGAGTGGCTAGGGGGTGCAGTGGAGGATTACTTCATCG	X	-	146436886-146436935	XqF3	Mus musculus TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) (Tsr2), mRNA.		Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		2310007F12Rik	2310007F12Rik
Mus musculus	RefSeq	ILMN_218242	ILMN_218242	TSR2	NM_175146.2	NM_175146.2		69499	31341017	NM_175146.2	Tsr2	NP_780355.1	ILMN_2907115	004200041	S	3121	GGGGACAGTGAAATGCTGGCCACTCTTAAGGCTAAGGGACTTTCACAGCT	X	-	146428410-146428459	XqF3	Mus musculus TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) (Tsr2), mRNA.		Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		2310007F12Rik	2310007F12Rik
Mus musculus	RefSeq	ILMN_220033	ILMN_220033	BC051227	NM_183170.2	NM_183170.2		234384	118130711	NM_183170.2	BC051227	NP_898993.1	ILMN_1238114	007380152	S	492	CCTCTTCATCCCTTCTCATTTCCGAGTCACCTATATCAATGGGCTGACAC	8	-	73283045-73283094	8qB3.3	Mus musculus cDNA sequence BC051227 (BC051227), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC63135; Fksg24	MGC63135; Fksg24
Mus musculus	RefSeq	ILMN_214314	ILMN_214314	NWD1	NM_176940.3	NM_176940.3		319555	142381392	NM_176940.3	Nwd1	NP_795914.1	ILMN_1253932	005700270	S	4091	ACGGCATGAGCGATGGCAGCCTCTTCCTGTACGACTGTGCATGCTCTAAA	8	+	75231862-75231911	8qB3.3	Mus musculus NACHT and WD repeat domain containing 1 (Nwd1), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	A230063L24Rik	A230063L24Rik
Mus musculus	RefSeq	ILMN_255917	ILMN_255917	OLFR913	NM_001011523.1	NM_001011523.1		258225	58372119	NM_001011523.1	Olfr913	NP_001011523.1	ILMN_2922354	005290603	S	149	GGCTAAATTCTCACCTCCACACACCCATGTACTTTCTCTTGTTTAACTTG	9	+	38401956-38402005	9qA5.1	Mus musculus olfactory receptor 913 (Olfr913), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR165-10; MOR165-9P	MOR165-10; MOR165-9P
Mus musculus	RefSeq	ILMN_196833	ILMN_255917	OLFR913	NM_001011523.1	NM_001011523.1		258225	58372119	NM_001011523.1	Olfr913	NP_001011523.1	ILMN_1232331	007200608	S	701	GGTCTAAAGCTTTCAGCACCTGCAGTTCCCATATGCTTGCTGTTTCTCTC	9	+	38402508-38402557	9qA5.1	Mus musculus olfactory receptor 913 (Olfr913), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR165-10; MOR165-9P	MOR165-10; MOR165-9P
Mus musculus	RefSeq	ILMN_193099	ILMN_256269	PTBP2	NM_019550.1	NM_019550.1		56195	9507002	NM_019550.1	Ptbp2	NP_062423.1	ILMN_2672379	006290725	S	2785	AATCTGAATTGTTGATTCTGTTAAATGACCAATACTTTTTGAAATTGATG	3	-	119422059-119422108	3qG1	Mus musculus polypyrimidine tract binding protein 2 (Ptbp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]	nPTB; Ptb2; brPTB	nPTB; Ptb2; brPTB
Mus musculus	RefSeq	ILMN_222282	ILMN_222282	WDR85	NM_026044.1	NM_026044.1		67228	21313065	NM_026044.1	Wdr85	NP_080320.1	ILMN_2889266	002370731	S	1628	GTGTATGCATCTGTCTGTGTGTGGTTGCTGGAATCCCCTTCGAGCTAGGG	2	+	24794179-24794228	2qA3	Mus musculus WD40 repeat domain 85 (Wdr85), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]			2810443J12Rik; AW060693	2810443J12Rik; AW060693
Mus musculus	MEEBO	ILMN_194873	ILMN_194873	SNX12	scl53990.4_167				9256639	NM_018875	Snx12		ILMN_2510409	000150553	S	20	CTGTCAGACAATGTCATATTCAACTCTGTTCATATTAAACCACTGTGAAG							The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191448	ILMN_214112	SNHG11	NM_175692.3	NM_175692.3		319317	124286808	NM_175692.3	Snhg11	NP_783623.2	ILMN_1238627	004220288	S	5573	CACCAGTTACTAAGTAGGGTTGAGTGGGGCTGCCTTCTTGTCTCCAGGCG	2	+	158211590-158211639	2qH1	Mus musculus small nucleolar RNA host gene 11 (non-protein coding) (Snhg11), mRNA.				E130013N09Rik; AL022637; AW319638; RP23-132A3.1; AI854265	E130013N09Rik; AL022637; AW319638; RP23-132A3.1; AI854265
Mus musculus	RefSeq	ILMN_214112	ILMN_214112	SNHG11	NM_175692.3	NM_175692.3		319317	124286808	NM_175692.3	Snhg11	NP_783623.2	ILMN_2952098	002480730	S	5582	CTAAGTAGGGTTGAGTGGGGCTGCCTTCTTGTCTCCAGGCGAATCATTAC	2	+	158211599-158211648	2qH1	Mus musculus small nucleolar RNA host gene 11 (non-protein coding) (Snhg11), mRNA.				E130013N09Rik; AL022637; AW319638; RP23-132A3.1; AI854265	E130013N09Rik; AL022637; AW319638; RP23-132A3.1; AI854265
Mus musculus	RefSeq	ILMN_197207	ILMN_323310	LOC100048649	XM_001480796.1	XM_001480796.1		100048649	149274986	XM_001480796.1	LOC100048649	XP_001480846.1	ILMN_1244084	000940632	S	519	TCCAGGTGCAGAAGGGCTGGGACTGGGAGGTGGAGATCAGAAAAACAGTC					PREDICTED: Mus musculus similar to VWF-cleaving protease Adamts-13 (LOC100048649), mRNA.					
Mus musculus	MEEBO	ILMN_192871	ILMN_192871	1700026J12RIK	scl48422.8.1_171				51830846	XM_358865	1700026J12Rik		ILMN_1260500	007560524	I	1265	GCCGACCACAGAGTTTAGCCTGCAGGACGCAGAGGGCAGAAGAAGCTGAA							Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]			
Mus musculus	RefSeq	ILMN_199259	ILMN_199259	LOC236297	XM_142846.2	XM_142846.2			38093526	XM_142846.2	LOC236297		ILMN_1224358	001230554	S	7	AGGAGGGCAGTGCATGAGAGGAAGTCAAAACCACAGAGAAATGAAAATAG										
Mus musculus	RefSeq	ILMN_211865	ILMN_211865	NFASC	NM_182716.3	NM_182716.3		269116	118130561	NM_182716.3	Nfasc	NP_874385.1	ILMN_2620224	006060563	S	3835	ACCATCAAGCAGCAGGAGAGCGATGACAGCCTGGTGGACTATGGCGAAGG	1	-	134467129-134467178	1qE4	Mus musculus neurofascin (Nfasc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D430023G06Rik; AA387016; mKIAA0756	D430023G06Rik; AA387016; mKIAA0756
Mus musculus	RefSeq	ILMN_211865	ILMN_211865	NFASC	NM_182716.3	NM_182716.3		269116	118130561	NM_182716.3	Nfasc	NP_874385.1	ILMN_2648812	001940524	S	3349	CTCCCCAACAGTAAATGGGCCAACATCACCTGGAAGCACAATTTCAGGCC	1	-	134480972-134481021	1qE4	Mus musculus neurofascin (Nfasc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D430023G06Rik; AA387016; mKIAA0756	D430023G06Rik; AA387016; mKIAA0756
Mus musculus	RefSeq	ILMN_211865	ILMN_211865	NFASC	NM_182716.3	NM_182716.3		269116	118130561	NM_182716.3	Nfasc	NP_874385.1	ILMN_1228249	005360360	S	3530	CCCGGGACAACGAGGGCATCAGCAGTACCGTCATCACCTTTATGACCAGT	1	-	134479575-134479624	1qE4	Mus musculus neurofascin (Nfasc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D430023G06Rik; AA387016; mKIAA0756	D430023G06Rik; AA387016; mKIAA0756
Mus musculus	RefSeq	ILMN_211067	ILMN_211067	FIBCD1	NM_178887.3	NM_178887.3		98970	142353012	NM_178887.3	Fibcd1	NP_849218.1	ILMN_1229726	002510468	S	4636	GTTGCTACTTGGGGCTGTGTGCACCCGGTGTCTTGTGTACCCTTGTCTTC	2	-	31668836-31668885	2qB	Mus musculus fibrinogen C domain containing 1 (Fibcd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	AI448887	AI448887
Mus musculus	Riken	ILMN_203132	ILMN_203132	6430517G15RIK	ri|6430517G15|PX00045P13|AK032298|2537					AK032298	6430517G15Rik		ILMN_1258066	006520592	S	2253	GGCTGGGCTAGCGGATACAGGGTCAATCTGTTAAAGTCAGGTGTCTGTCC										
Mus musculus	RefSeq	ILMN_222104	ILMN_225128	THOC7	NM_025435.2	NM_025435.2		66231	111185903	NM_025435.2	Thoc7	NP_079711.1	ILMN_2744641	000870307	S	641	GACTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCT	14	-	14781720-14781769	14qA1	Mus musculus THO complex 7 homolog (Drosophila) (Thoc7), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Nif3l1bp1; MGC151296; 1500006O09Rik; 9230101K24Rik; MGC151322	Nif3l1bp1; MGC151296; 1500006O09Rik; 9230101K24Rik; MGC151322
Mus musculus	RefSeq	ILMN_214745	ILMN_214745	PLXNA1	NM_008881.1	NM_008881.1		18844	6679388	NM_008881.1	Plxna1	NP_032907.1	ILMN_2918155	006020520	S	6286	CCAGAAGGAGGGCAGCAGGACAAGGGGCTGGACCAATTCACATTTCTTGG	6	-	89268984-89269033	6qD1	Mus musculus plexin A1 (Plxna1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 17154] [evidence IPI]	NOV; Plxn1; KIAA4053; 2600013D04Rik; mKIAA4053	NOV; Plxn1; KIAA4053; 2600013D04Rik; mKIAA4053
Mus musculus	RefSeq	ILMN_249876	ILMN_249876	GRM4	NM_001013385.1	NM_001013385.1		268934	62945391	NM_001013385.1	Grm4	NP_001013403.1	ILMN_3162152	001410152	S	2845	CCTGATGGCCCGCCCAGGGGAGAGCAGAAACTGTGTCCGAAGGGATGATT	17	-	27578585-27578634	17qA3.3	Mus musculus glutamate receptor, metabotropic 4 (Grm4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A G-protein coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity [goid 1642] [evidence TAS]	mGluR4; Gprc1d	mGluR4; Gprc1d
Mus musculus	Riken	ILMN_202044	ILMN_202044	2310076E21RIK	ri|2310076E21|ZX00055G20|AK010195|515					AK010195	2310076E21Rik		ILMN_2546596	003840129	S	105	CTAGGATGGGGTGCAGACGAGGAGGTGGCCCAGGAGCTGGAGACGGAGGA										
Mus musculus	MEEBO	ILMN_195052	ILMN_195052	ARHGAP20	scl36958.1_185				47575839	NM_175535	Arhgap20		ILMN_2721874	002360142	S	6005	CTGGTAAGGCTCTCTGCCAACCATTCTGACTCTGTTTCCTTAGATGCTCC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195052	ILMN_195052	ARHGAP20	scl36958.1_185				47575839	NM_175535	Arhgap20		ILMN_1256851	004810554	S	6004	GCTGGTAAGGCTCTCTGCCAACCATTCTGACTCTGTTTCCTTAGATGCTC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195052	ILMN_195052	ARHGAP20	scl36958.1_185				47575839	NM_175535	Arhgap20		ILMN_2512140	000840653	S	20	TGTTTTTTCATTGTATTCCCGGAGTGATGCAGACAAGTTTGTCCACATGC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218973	ILMN_218973	AMBP	NM_007443.1	NM_007443.1		11699	6680683	NM_007443.1	Ambp	NP_031469.1	ILMN_2904137	007000682	S	1121	GAACTAATACGCAGTTGAAGGTGCCAGTCTGCAAGCCAGAGGGTAGCCAC	4	-	62629702-62629735:62629736-62629751	4qB3	Mus musculus alpha 1 microglobulin/bikunin (Ambp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence ISO]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	ASPI; Itil; UTI; Intin4; HI-30; AI194774	ASPI; Itil; UTI; Intin4; HI-30; AI194774
Mus musculus	MEEBO	ILMN_217496	ILMN_217496	E330023G01	scl35466.3.1_11				51765065	XM_489293	E330023G01		ILMN_1218644	006420504	S	1100	GGTGCTAACCGAGTTCAGCTGGTCTTTCTATTTTCTGCCTTGTCTCTGTC										
Mus musculus	RefSeq	ILMN_199206	ILMN_322714	LOC100047246	XR_033799.1	XR_033799.1		100047246	149262336	XR_033799.1	LOC100047246		ILMN_1215479	001190215	S	544	TCATGACCTTGATCTGCCTGGCACAAAAGAAGAGACTGCTCTACTGGAGC					PREDICTED: Mus musculus similar to F-box protein 47 (LOC100047246), misc RNA.					
Mus musculus	RefSeq	ILMN_199936	ILMN_310946	LOC100045708	XM_001474781.1	XM_001474781.1		100045708	149253432	XM_001474781.1	LOC100045708	XP_001474831.1	ILMN_2537015	006480358	S	4340	CGACCTTATGCTGGGCCTGCTGCTGGGTTTCTGCATCAGTTGGTTCCTGG					PREDICTED: Mus musculus similar to hCG19301 (LOC100045708), mRNA.					
Mus musculus	RefSeq	ILMN_214886	ILMN_214886	IMPDH1	NM_011829.2	NM_011829.2		23917	34328208	NM_011829.2	Impdh1	NP_035959.2	ILMN_2680540	005290494	S	153	TGGGCTCACCGCGCAGCAGCTCTTTGCCAACGCGGATGGCCTCACCTACA	6	-	29162069-29162118	6qA3.3	Mus musculus inosine 5'-phosphate dehydrogenase 1 (Impdh1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IMP]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	B930086D20Rik	B930086D20Rik
Mus musculus	RefSeq	ILMN_214886	ILMN_214886	IMPDH1	NM_011829.2	NM_011829.2		23917	34328208	NM_011829.2	Impdh1	NP_035959.2	ILMN_1216301	000150541	S	2097	CCCTGGAGTGCTGTCCTCTCAGCCATGTGGCACTGTGGGTTCTGGACCTA	6	-	29150701-29150750	6qA3.3	Mus musculus inosine 5'-phosphate dehydrogenase 1 (Impdh1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IMP]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	B930086D20Rik	B930086D20Rik
Mus musculus	RefSeq	ILMN_214886	ILMN_214886	IMPDH1	NM_011829.2	NM_011829.2		23917	34328208	NM_011829.2	Impdh1	NP_035959.2	ILMN_2680543	004570379	S	135	GGCTACGTTCCCGAGGATGGGCTCACCGCGCAGCAGCTCTTTGCCAACGC	6	-	29162087-29162136	6qA3.3	Mus musculus inosine 5'-phosphate dehydrogenase 1 (Impdh1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IMP]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	B930086D20Rik	B930086D20Rik
Mus musculus	RefSeq	ILMN_221522	ILMN_242673	CLDND2	NM_028849.1	NM_028849.1		74276	119508801	NM_028849.1	Cldnd2	NP_083125.1	ILMN_2736714	005960551	S	530	GCCGACATGATCTTGCAGAGCACCGAAGCCATCAGCGGATTCCCGGTATG	7	+	50698604-50698653	7qB4	Mus musculus claudin domain containing 2 (Cldnd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700071E18Rik	1700071E18Rik
Mus musculus	RefSeq	ILMN_205239	ILMN_244580	MAP3K10	XM_897323.2	XM_897323.2		269881	94380074	XM_897323.2	Map3k10	XP_902416.1	ILMN_1228169	001070707	S	1474	AGAGGAAGAAGGTGGTGCTAGTGGGCGGGTGGGACATCAGTGGGGAACCA	7	-	27377022-27377071	7qA3	PREDICTED: Mus musculus mitogen activated protein kinase kinase kinase 10, transcript variant 4 (Map3k10), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]		
Mus musculus	RefSeq	ILMN_200862	ILMN_240040	LOC668540	XR_002200.1	XR_002200.1		668540	94380355	XR_002200.1	LOC668540		ILMN_2540267	004490402	S	947	CAACCAGCGCAGACAGGCGTGCTCCAACTATCTCTGGGTGACTGTGTCTT	7	-	39514229-39514278	7qB3	PREDICTED: Mus musculus similar to Ferritin light chain 1 (Ferritin L subunit 1) (LOC668540), mRNA.					
Mus musculus	Riken	ILMN_203978	ILMN_203978	A530026M20RIK	ri|A530026M20|PX00140M13|AK040811|1612					AK040811	A530026M20Rik		ILMN_2561436	002260706	S	1328	CGTTCCCAGCAGGAAGAAAATGGGAGGACAGAATAAAGAGGCATACCAGC										
Mus musculus	RefSeq	ILMN_259886	ILMN_259886	RPS24	NM_011297.2	NM_011297.2		20088	46519155	NM_011297.2	Rps24	NP_035427.2	ILMN_3126986	002710477	A	409	AACAGAATGAAGAAGGTCAGGGGCACGGCGAAGGCCAATGTTGGTGCTGG	14	+	25312659-25312708	14qA3	Mus musculus ribosomal protein S24 (Rps24), transcript variant 1, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISO]	MGC107549	MGC107549
Mus musculus	RefSeq	ILMN_216590	ILMN_323646	LOC100048049	XM_001479718.1	XM_001479718.1		100048049	149270737	XM_001479718.1	LOC100048049	XP_001479768.1	ILMN_2672924	006290050	S	2273	CAGCGCCACAGGCAACACCTACACTGCAGTCTAACAGCAGGAAAGCAGAG					PREDICTED: Mus musculus similar to Regulatory factor X, 3 (influences HLA class II expression), transcript variant 1 (LOC100048049), mRNA.					
Mus musculus	RefSeq	ILMN_216590	ILMN_323646	LOC100048049	XM_001479718.1	XM_001479718.1		100048049	149270737	XM_001479718.1	LOC100048049	XP_001479768.1	ILMN_1219086	002370327	S	2309	GCAGGAAAGCAGAGTTTTCCAGCTTACTCTAACCCCATTGATACTGGGCT					PREDICTED: Mus musculus similar to Regulatory factor X, 3 (influences HLA class II expression), transcript variant 1 (LOC100048049), mRNA.					
Mus musculus	MEEBO	ILMN_187770	ILMN_187770	SCL0002447.1_1	scl0002447.1_1	AK035479.1			26330687	AK035479.1	scl0002447.1_1		ILMN_2446969	005090427	S	19	GCTTCTGGAAAGAAACAGTAAGAAGAAGTCCAAACTGAGAAAGAAACCCA										
Mus musculus	RefSeq	ILMN_198278	ILMN_198278	LOC381144	XM_358513.1	XM_358513.1			38083590	XM_358513.1	LOC381144		ILMN_2531118	003140070	S	121	AACACCCTCAAGGACAGAGACTACCTGTTCTTTCTGGGCCTCTGGAAGAT										
Mus musculus	RefSeq	ILMN_253633	ILMN_253633	CHRNB3	NM_027454.3	NM_027454.3		108043	146141099	NM_027454.3	Chrnb3	NP_081730.1	ILMN_3163270	005860056	A	1677	TGGAGGAAACTGAGAAAACGTGGGTTTGAGCTAGTGTGATGGTGGCTGCC				8qA2	Mus musculus cholinergic receptor, nicotinic, beta polypeptide 3 (Chrnb3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IEA]	5730417K16Rik; Acrb3	5730417K16Rik; Acrb3
Mus musculus	RefSeq	ILMN_185102	ILMN_322685	LOC100047012	XM_001477380.1	XM_001477380.1		100047012	149249463	XM_001477380.1	LOC100047012	XP_001477430.1	ILMN_2512043	006580427	S	205	CAGGCAAAGGTCGGATGATGAGAGCCCTAGCACCAGCAGTGGCAGTTCAG					PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme UbcM2 (LOC100047012), mRNA.					
Mus musculus	MEEBO	ILMN_212799	ILMN_212799	ARHGAP10	scl34628.21.1_19	NM_030113.1			13386453	NM_030113.1	Arhgap10		ILMN_2724483	002510747	S	2125	CCCGGCCATCCATGGTGCAGTGGCTAAATATGCAGTCTCCAACCACACCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]		
Mus musculus	RefSeq	ILMN_208913	ILMN_208913	EXDL2	NM_133798.1	NM_133798.1		97827	19527013	NM_133798.1	Exdl2	NP_598559.1	ILMN_2728539	003360279	S	2541	TGGCCAGGTTTCAGTATGAGGACTTCGCCTCCCCTAGAGCCTGAGACACT	12	+	81598797-81598846	12qC3	Mus musculus exonuclease 3''-5'' domain-like 2 (Exdl2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C85658; 4930539P14Rik	C85658; 4930539P14Rik
Mus musculus	RefSeq	ILMN_208913	ILMN_208913	EXDL2	NM_133798.1	NM_133798.1		97827	19527013	NM_133798.1	Exdl2	NP_598559.1	ILMN_2927225	005360364	S	2525	CACTCCCAGAGCCATTTGGCCAGGTTTCAGTATGAGGACTTCGCCTCCCC	12	+	81598781-81598830	12qC3	Mus musculus exonuclease 3''-5'' domain-like 2 (Exdl2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C85658; 4930539P14Rik	C85658; 4930539P14Rik
Mus musculus	RefSeq	ILMN_208913	ILMN_208913	EXDL2	NM_133798.1	NM_133798.1		97827	19527013	NM_133798.1	Exdl2	NP_598559.1	ILMN_2728538	001240392	S	2539	TTGGCCAGGTTTCAGTATGAGGACTTCGCCTCCCCTAGAGCCTGAGACAC	12	+	81598795-81598844	12qC3	Mus musculus exonuclease 3''-5'' domain-like 2 (Exdl2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C85658; 4930539P14Rik	C85658; 4930539P14Rik
Mus musculus	RefSeq	ILMN_217993	ILMN_217993	BC068157	NM_207203.1	NM_207203.1		73072	46402166	NM_207203.1	BC068157	NP_997086.1	ILMN_2690232	006130593	S	4168	GAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTGAC	8	-	4209848-4209897	8qA1.1	Mus musculus cDNA sequence BC068157 (BC068157), mRNA.					
Mus musculus	MEEBO	ILMN_212269	ILMN_212269	DISC1	scl000594.1_57	NM_170596.1			24528562	NM_170596.1	Disc1		ILMN_2624596	004590689	S	1218	TGGTCTCAGCCTCCTTCATCCTGGGAGCTGTGTGGTTGAATCTTGTGGGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199234	ILMN_199234	LOC280205	XM_207178.1	XM_207178.1			25056071	XM_207178.1	LOC280205		ILMN_1247477	004850753	S	178	TGGTGGGGTAACAGAAAGGAACTGGCCACCATCAGGAACATCTGCAGTCA										
Mus musculus	RefSeq	ILMN_230931	ILMN_230931	2810416G20RIK	NM_025981.1	NM_025981.1		67124	110350657	NM_025981.1	2810416G20Rik	NP_080257.1	ILMN_2988818	006580768	S	1623	GGATCTTAGCCATGATGTAGGTGAATGATCCTTCCGTTAAACCAGCTCCC					Mus musculus RIKEN cDNA 2810416G20 gene (2810416G20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194050	ILMN_194050	ZFP39	NM_011758.2	NM_011758.2		22698	83816961	NM_011758.2	Zfp39	NP_035888.2	ILMN_1241611	006760022	S	3696	CCCCTGGTCCTACACTCCATCCTCCATATGAAAGCGTTGAACAGAAGTGG	11	-	58701799-58701848	11qB1.3	Mus musculus zinc finger protein 39 (Zfp39), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	RP23-419P16.10; Zfp-39; CTfin33	RP23-419P16.10; Zfp-39; CTfin33
Mus musculus	RefSeq	ILMN_211369	ILMN_211369	FBXW17	NM_175401.3	NM_175401.3		109082	126723091	NM_175401.3	Fbxw17	NP_780610.2	ILMN_2615145	001780452	S	1597	CAAACAAGGGAGAATAAGTCCCCTCTTCAGGCGCTTTCCCAGGTGGCACG	13	+	50528950-50528999	13qA5	Mus musculus F-box and WD-40 domain protein 17 (Fbxw17), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]			C85886; 1110064L07Rik	C85886; 1110064L07Rik
Mus musculus	RefSeq	ILMN_212181	ILMN_212181	PHF23	NM_030064.1	NM_030064.1		78246	21313417	NM_030064.1	Phf23	NP_084340.1	ILMN_2984969	001470097	S	1621	ACCCCATTACAGTTGGGTCGGGGAGGCTGGATCAGTAGACAGAATCTCTG	11	+	69815819-69815868	11qB3	Mus musculus PHD finger protein 23 (Phf23), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-172M21.13; JUNE-1; 2410141M05Rik	RP23-172M21.13; JUNE-1; 2410141M05Rik
Mus musculus	Riken	ILMN_206517	ILMN_206517	D830027H13RIK	ri|D830027H13|PX00199J11|AK085906|2427					AK085906	D830027H13Rik		ILMN_2580691	006220327	S	2375	TTTTTTTTCCTGCAGTCATCGGCTGCCAACACAGTCTGCACCAACTGGAG										
Mus musculus	RefSeq	ILMN_221814	ILMN_221814	RPS6KA4	NM_019924.1	NM_019924.1		56613	9910453	NM_019924.1	Rps6ka4	NP_064308.1	ILMN_2740764	004220187	S	2701	CTAAGTACCCAGTTGCCATGGAGAAGAAATCAGGAGCCCGTATACTGTGC	19	-	6903929-6903978	19qA	Mus musculus ribosomal protein S6 kinase, polypeptide 4 (Rps6ka4), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI848992; 90kDa; Msk2; mMSK2; 1110069D02Rik	AI848992; 90kDa; Msk2; mMSK2; 1110069D02Rik
Mus musculus	Riken	ILMN_201684	ILMN_201684	CSNK2A1-RS4	ri|2610021E14|ZX00033P03|AK011501|1304					AK011501	Csnk2a1-rs4		ILMN_1218670	003420259	S	1201	CAGCACTCGACAGGCAAAGGCCGTGAGTTGAAGGCCAGTTTGGTCTACAC										
Mus musculus	RefSeq	ILMN_248198	ILMN_248198	PNPLA1	NM_001034885.1	NM_001034885.1		433091	85702231	NM_001034885.1	Pnpla1	NP_001030057.1	ILMN_2841024	007100202	S	4254	ATGTGAACAAAGATAAGCCCCCAGCCCACAGGAACAAAGTCCTGATGCCC	17	+	28617668-28617717	17qA3.3	Mus musculus patatin-like phospholipase domain containing 1 (Pnpla1), mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211409	ILMN_211409	D12ERTD551E	NM_028731.5	NM_028731.5		52635	76096371	NM_028731.5	D12Ertd551e	NP_083007.2	ILMN_2615587	001050392	S	2525	GGTGGCTTCCTGTCCAAAGATAAAGGGCTTCTTGGCAAAGTGCTGGTTGT	12	+	117607276-117607314:117608485-117608495	12qF2	Mus musculus DNA segment, Chr 12, ERATO Doi 551, expressed (D12Ertd551e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			CHR2SYT; 4921504I16Rik; KIAA1228; 2410017M09Rik	CHR2SYT; 4921504I16Rik; KIAA1228; 2410017M09Rik
Mus musculus	RefSeq	ILMN_219992	ILMN_219992	BNIP2	NM_016787.3	NM_016787.3		12175	141803471	NM_016787.3	Bnip2	NP_058067.2	ILMN_1213672	004260630	S	2360	GTGCCTCCAAGCAGGGTCTTAATTACCTTCAAAATCATTCTAAAACAATG	9	+	69856055-69856104	9qD	Mus musculus BCL2/adenovirus E1B interacting protein 2 (Bnip2), transcript variant beta, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]		BNIP2beta; 5730523P12Rik; Nip21	BNIP2beta; 5730523P12Rik; Nip21
Mus musculus	Riken	ILMN_205627	ILMN_205627	1190012C08RIK	ri|1190012C08|ZA00008I22|AK028016|1804					AK028016	1190012C08Rik		ILMN_1254673	006400280	S	1507	GTGCACTGTGAGTTGGACTGCTGGGTTTCAGTCACCTCCGTGGTAGCCAT										
Mus musculus	RefSeq	ILMN_197905	ILMN_313512	LOC100046211	XR_032439.1	XR_032439.1		100046211	149274297	XR_032439.1	LOC100046211		ILMN_1255989	003850484	S	1029	GACCCAGGAGAGGAACCATTGTGCCATGATCTTCCAGCAGGAGTTGCCCG					PREDICTED: Mus musculus similar to anaphase-promoting complex subunit 5 (LOC100046211), misc RNA.					
Mus musculus	MEEBO	ILMN_195667	ILMN_195667	IGHV1S28_X02460_IG_HEAVY_VARIABLE_1S28_13	IGHV1S28_X02460_Ig_heavy_variable_1S28_13						IGHV1S28_X02460_Ig_heavy_variable_1S28_13		ILMN_2517595	001440373	S	16	TCCTGTCAGTAACTGCAGGTGTCCACTCGCAGGTCCAGCTGCAGCAGTCT										
Mus musculus	RefSeq	ILMN_212980	ILMN_212980	FBXO17	NM_015796.1	NM_015796.1		50760	7657080	NM_015796.1	Fbxo17	NP_056611.1	ILMN_2632241	006450075	S	1306	AGCTTGGGATCATAACAAAAGGAGAAAGCTACTTATAAGAAGACAGTGAC	7	+	29522906-29522955	7qA3	Mus musculus F-box protein 17 (Fbxo17), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Fbg4; FBXO26; Fbx17	Fbg4; FBXO26; Fbx17
Mus musculus	RefSeq	ILMN_188386	ILMN_188386	TSG101	NM_021884.3	NM_021884.3		22088	142375824	NM_021884.3	Tsg101	NP_068684.1	ILMN_2452237	001940156	S	1081	CTATTGAAGACACTATCTTTTACCTTGGAGAAGCTTTGCGGCGGGGAGTC	7	-	54146315-54146364	7qB4	Mus musculus tumor susceptibility gene 101 (Tsg101), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	AI255943; CC2	AI255943; CC2
Mus musculus	RefSeq	ILMN_197123	ILMN_317531	LOC669171	XR_032951.1	XR_032951.1		669171	149233721	XR_032951.1	LOC669171		ILMN_1219073	001030367	S	87	CACCAAGCAGAAGGGTGATGAGAGGACTCCACAAGGAGCAGTCCCTGCCT				1qA5	PREDICTED: Mus musculus similar to LNR42 (LOC669171), misc RNA.					
Mus musculus	RefSeq	ILMN_219015	ILMN_219015	TMEM125	NM_172383.2	NM_172383.2		230678	142366443	NM_172383.2	Tmem125	NP_759015.1	ILMN_2703138	004560609	S	1639	CGGATGAGATGGACCTGACTGGGGAAACACCTTTGAGCTTGTAACCTAGC	4	-	118213721-118213770	4qD2.1	Mus musculus transmembrane protein 125 (Tmem125), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AV223516; MGC48203; 6330530A05Rik	AV223516; MGC48203; 6330530A05Rik
Mus musculus	Riken	ILMN_203903	ILMN_203903	9430068D24RIK	ri|9430068D24|PX00110E13|AK034967|2370					AK034967	9430068D24Rik		ILMN_2560856	003440670	S	2257	TGTGAAGCCCACACAGATGCCCTAGATATGCCTTACTTCCTGGGTGTCTC										
Mus musculus	RefSeq	ILMN_195147	ILMN_195147	ZFYVE27	NM_177319.2	NM_177319.2		319740	31341138	NM_177319.2	Zfyve27	NP_796293.1	ILMN_2512986	006380121	S	5465	CGGAGACTGCCTCAAGAAGATTGAAGGACAGAAGCAGTTCCTCTGGCATC	19	+	42268988-42269037	19qC3	Mus musculus zinc finger, FYVE domain containing 27 (Zfyve27), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	protrudin; AI426636; 9530077C24Rik; AI593546; 2210011N02Rik; AI835681	protrudin; AI426636; 9530077C24Rik; AI593546; 2210011N02Rik; AI835681
Mus musculus	RefSeq	ILMN_199564	ILMN_199564	LOC382735	XM_356648.1	XM_356648.1			38074367	XM_356648.1	LOC382735		ILMN_1219981	002140661	S	365	TGGACCGTGGAAAAGCAGGAGAGCAGAAGGTAAGGGGTGCAGGTGCCCAT										
Mus musculus	RefSeq	ILMN_213769	ILMN_213769	SH3RF2	NM_172966.1	NM_172966.1		269016	27370479	NM_172966.1	Sh3rf2	NP_766554.1	ILMN_2942551	006110612	S	4367	GCATCCTGTGTCTTGTAGAGCTTTGTGAGTGCTTGAACGGGATGAGCTGC	18	+	42284347-42284396	18qB3	Mus musculus SH3 domain containing ring finger 2 (Sh3rf2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310046K19; RNF158; 9130023G24Rik; AI452083	2310046K19; RNF158; 9130023G24Rik; AI452083
Mus musculus	RefSeq	ILMN_213769	ILMN_213769	SH3RF2	NM_172966.1	NM_172966.1		269016	27370479	NM_172966.1	Sh3rf2	NP_766554.1	ILMN_2942554	003310451	S	4219	TGTGGCTATCAAACAGGTTGTTTAGAGGACAACAGAGGGGCATGCCTATG	18	+	42284199-42284248	18qB3	Mus musculus SH3 domain containing ring finger 2 (Sh3rf2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310046K19; RNF158; 9130023G24Rik; AI452083	2310046K19; RNF158; 9130023G24Rik; AI452083
Mus musculus	RefSeq	ILMN_253743	ILMN_253743	CAPZB	NM_001037761.1	NM_001037761.1		12345	83649736	NM_001037761.1	Capzb	NP_001032850.1	ILMN_3031009	002030215	I	839	AGTGCTGACCCAGCGCCAGGTCTACATCCAGCCTGATAATTGAGCCGACC	4	+	138844836-138844878:138844879-138844885	4qD3	Mus musculus capping protein (actin filament) muscle Z-line, beta (Capzb), transcript variant 1, mRNA.	Specialised type of cell-cell junction in cardiac muscle, which mediates mechanical and electrochemical integration between the individual cardiomyocytes. Consist of three different kinds of substructures: adherens junctions, desmosomes and gap junctions [goid 14704] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	1700120C01Rik; CPB2; CPbeta2; Cappb1; AI325129; CPbeat2; CPbeta1; CPB1	1700120C01Rik; CPB2; CPbeta2; Cappb1; AI325129; CPbeat2; CPbeta1; CPB1
Mus musculus	RefSeq	ILMN_253743	ILMN_253743	CAPZB	NM_001037761.1	NM_001037761.1		12345	83649736	NM_001037761.1	Capzb	NP_001032850.1	ILMN_3104349	003870685	A	1154	TCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGT	4	+	138847180-138847229	4qD3	Mus musculus capping protein (actin filament) muscle Z-line, beta (Capzb), transcript variant 1, mRNA.	Specialised type of cell-cell junction in cardiac muscle, which mediates mechanical and electrochemical integration between the individual cardiomyocytes. Consist of three different kinds of substructures: adherens junctions, desmosomes and gap junctions [goid 14704] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	1700120C01Rik; CPB2; CPbeta2; Cappb1; AI325129; CPbeat2; CPbeta1; CPB1	1700120C01Rik; CPB2; CPbeta2; Cappb1; AI325129; CPbeat2; CPbeta1; CPB1
Mus musculus	RefSeq	ILMN_193469	ILMN_253743	CAPZB	NM_001037761.1	NM_001037761.1		12345	83649736	NM_001037761.1	Capzb	NP_001032850.1	ILMN_1230100	001030730	S	794	CCCCGACAACCACAAGTTTAAGCAGTTGCAGAGGGAACTTTCTCAAGTGC	4	+	138844791-138844840	4qD3	Mus musculus capping protein (actin filament) muscle Z-line, beta (Capzb), transcript variant 1, mRNA.	Specialised type of cell-cell junction in cardiac muscle, which mediates mechanical and electrochemical integration between the individual cardiomyocytes. Consist of three different kinds of substructures: adherens junctions, desmosomes and gap junctions [goid 14704] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	1700120C01Rik; CPB2; CPbeta2; Cappb1; AI325129; CPbeat2; CPbeta1; CPB1	1700120C01Rik; CPB2; CPbeta2; Cappb1; AI325129; CPbeat2; CPbeta1; CPB1
Mus musculus	RefSeq	ILMN_212638	ILMN_253743	CAPZB	NM_001037761.1	NM_001037761.1		12345	83649736	NM_001037761.1	Capzb	NP_001032850.1	ILMN_1220165	001300327	S	532	GCCGTACTGCCCATTACAAGTTGACCTCCACGGTGATGCTATGGCTGCAA	4	+	138836396-138836445	4qD3	Mus musculus capping protein (actin filament) muscle Z-line, beta (Capzb), transcript variant 1, mRNA.	Specialised type of cell-cell junction in cardiac muscle, which mediates mechanical and electrochemical integration between the individual cardiomyocytes. Consist of three different kinds of substructures: adherens junctions, desmosomes and gap junctions [goid 14704] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	1700120C01Rik; CPB2; CPbeta2; Cappb1; AI325129; CPbeat2; CPbeta1; CPB1	1700120C01Rik; CPB2; CPbeta2; Cappb1; AI325129; CPbeat2; CPbeta1; CPB1
Mus musculus	RefSeq	ILMN_208828	ILMN_208828	HAPLN4	NM_177900.4	NM_177900.4		330790	118130529	NM_177900.4	Hapln4	NP_808568.1	ILMN_2589915	000050563	S	3108	CAAACACTTATCCAGACTCTTCTCTGGGCTAGGATTGTTCTGAGGTCCCC	8	+	72614293-72614342	8qB3.3	Mus musculus hyaluronan and proteoglycan link protein 4 (Hapln4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Bral2; Lpr4; 9330174O11	Bral2; Lpr4; 9330174O11
Mus musculus	MEEBO	ILMN_193518	ILMN_193518	2210011G09RIK	scl20708.1.1_309						2210011G09Rik		ILMN_1232391	006580687	S	5	ATCCTGGAGTTACCAGTGTCCCTGATTAGTAACTGTTCAAAGTCCTCCGC										
Mus musculus	MEEBO	ILMN_184843	ILMN_184843	6330409D20RIK	scl4537.3.1_76						6330409D20Rik		ILMN_1228149	007380091	S	8	AGGCGTGGCCTTACCCTCTGTCCTGAGCTTCTTCCTTTGGGCCTTAGGGT										
Mus musculus	RefSeq	ILMN_199106	ILMN_199106	LOC380676	XM_354585.1	XM_354585.1			38090963	XM_354585.1	LOC380676		ILMN_1235294	003870053	S	447	AGGCGTGTACCTGAGCCCAGTAAGTCTTTACCACTACCAGAAATCAAGAC										
Mus musculus	RefSeq	ILMN_213008	ILMN_213008	CIC	NM_027882.2	NM_027882.2		71722	24475687	NM_027882.2	Cic	NP_082158.1	ILMN_1216970	007560100	S	5221	TTCATGCACCCCCCTTTTTCCCCAGAGGGGCTGGACTCAGGTTAGTTTGG	7	+	26078914-26078963	7qA3	Mus musculus capicua homolog (Drosophila) (Cic), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	mKIAA0306; 1200010B10Rik	mKIAA0306; 1200010B10Rik
Mus musculus	RefSeq	ILMN_191089	ILMN_254383	HIST1H1D	NM_145713.2	NM_145713.2		14957	34328364	NM_145713.2	Hist1h1d	NP_663759.2	ILMN_1217657	005870131	S	2577	GGGCTGTTGAACAAGTCTCCAGTAGGACAAAACCTGATTTAAATGCTCGT	13	+	23649479-23649528	13qA3.1	Mus musculus histone cluster 1, H1d (Hist1h1d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another [goid 16584] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	H1D; H1f3; H1.3; H1s-4	H1D; H1f3; H1.3; H1s-4
Mus musculus	RefSeq	ILMN_200657	ILMN_200657	LOC383437	XM_357053.1	XM_357053.1			38084915	XM_357053.1	LOC383437		ILMN_1250474	003610551	S	336	CTCTGCGGCTTTCAGAACCAACAAGAGCCTGAACACCCTGGACCTGTCTG										
Mus musculus	MEEBO	ILMN_184467	ILMN_184467	RAB11FIP4	scl41183.17_270				31342142	NM_175543	Rab11fip4		ILMN_1236245	003190504	S	20	CCTCAGAAGCCAGTGGTTGCAGATGGCCTTAGCTTTGGGCTTGGGAAGGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184467	ILMN_184467	RAB11FIP4	scl41183.17_270				31342142	NM_175543	Rab11fip4		ILMN_1259377	003170682	S	3001	CACCCGTGTTGGGGGTTGAGGGAGGGTTAAAATGTGATCTGGGAGTAGGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210194	ILMN_256306	OLFR45	NM_146963.1	NM_146963.1		18344	22203816	NM_146963.1	Olfr45	NP_667174.1	ILMN_2603159	003140743	S	601	CTTTTGGGAGATTCCTTTTTTGGAGGCGTCAATTTTGTGCTTACCTTGCT	7	+	147877406-147877455	7qF5	Mus musculus olfactory receptor 45 (Olfr45), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR253-2; IB6	MOR253-2; IB6
Mus musculus	Riken	ILMN_203522	ILMN_203522	4732426B21RIK	ri|4732426B21|PX00050C15|AK028648|4204					AK028648	4732426B21Rik		ILMN_1246784	000770040	S	1767	GCCAACATCAACTTCAAGCCCTCCAACCACAGGGGCCAGCTAGAGATCAG										
Mus musculus	Riken	ILMN_205835	ILMN_205835	A630051C18RIK	ri|A630051C18|PX00146M18|AK041990|1070					AK041990	A630051C18Rik		ILMN_1227053	001170703	S	833	GTGTAGGAGCTGACCCTGGCAAATGGGTGGCTTCATCAGCAGAGAGCAGC										
Mus musculus	MEEBO	ILMN_190238	ILMN_190238	E030025D05RIK	scl40427.5_4				31795587	NM_181577	E030025D05Rik		ILMN_2723051	007100605	S	2099	TCTCCAGCTAGCTTCAGTGGACATACCACACCTTCTCAGCAGCCTGAACC										
Mus musculus	RefSeq	ILMN_215681	ILMN_215681	EGFLAM	NM_178748.5	NM_178748.5		268780	146198636	NM_178748.5	Egflam	NP_848863.1	ILMN_2662366	001340670	S	4595	GCCCCTCTAAGTGGAAGGAAATACGATCCAGCTCCTGGAAGAGCCTATAA				15qA1	Mus musculus EGF-like, fibronectin type III and laminin G domains (Egflam), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			5930412K08; AU040377	5930412K08; AU040377
Mus musculus	RefSeq	ILMN_215681	ILMN_215681	EGFLAM	NM_178748.5	NM_178748.5		268780	146198636	NM_178748.5	Egflam	NP_848863.1	ILMN_1242669	005910291	S	796	CCAAGAGCGCCTGCAGATGGACTCCATGGTTATCAAAGGCCTTGATCCAG				15qA1	Mus musculus EGF-like, fibronectin type III and laminin G domains (Egflam), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			5930412K08; AU040377	5930412K08; AU040377
Mus musculus	RefSeq	ILMN_186024	ILMN_244748	PALLD	XM_974582.1	XM_974582.1		72333	94385056	XM_974582.1	Palld	XP_979676.1	ILMN_2431965	002630092	S	5052	GCCTCACTTGTACAGCTTTCTACTTTTGTAAGAACACCAACCAAGCAAGT				8qB3.1	PREDICTED: Mus musculus palladin, cytoskeletal associated protein, transcript variant 4 (Palld), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence ISS]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]		
Mus musculus	RefSeq	ILMN_186024	ILMN_244748	PALLD	XM_974582.1	XM_974582.1		72333	94385056	XM_974582.1	Palld	XP_979676.1	ILMN_1246642	005420463	S	3933	CGCTGTGCTTCAAAGTCATCGTATCTTTCCAACATTCACACTGCCATGCT				8qB3.1	PREDICTED: Mus musculus palladin, cytoskeletal associated protein, transcript variant 4 (Palld), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence ISS]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]		
Mus musculus	RefSeq	ILMN_217403	ILMN_217403	JUND1	NM_010592.3	NM_010592.3		16478	41352710	NM_010592.3	Jund1	NP_034722.1	ILMN_2682788	004390050	S	1293	CCAGTCCTGCGCGTGGCTGCCCCTTTGTACCTCCGAGTAGGGGCTCTAAG	8	+	73224140-73224189	8qB3.3	Mus musculus Jun proto-oncogene related gene d1 (Jund1), mRNA.				Jund; MGC6245	Jund; MGC6245
Mus musculus	RefSeq	ILMN_215133	ILMN_215133	NRN1L	NM_175024.3	NM_175024.3		234700	142383424	NM_175024.3	Nrn1l	NP_778189.1	ILMN_2655905	006450138	S	498	AAACAGTCTGGTTGGCCAGCCAACAGTGCCCTTGCCTCCCATCACTGCAT	8	+	108418807-108418808:108418809-108418856	8qD3	Mus musculus neuritin 1-like (Nrn1l), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			G630049C14Rik; Cpg15-2	G630049C14Rik; Cpg15-2
Mus musculus	RefSeq	ILMN_193892	ILMN_251251	LOC625605	XM_890970.2	XM_890970.2		625605	94379400	XM_890970.2	LOC625605	XP_896063.1	ILMN_1219396	000990521	S	3047	AATGAGAAACACAGACTAACTAAATAATCAGCAAAGTTGAAATCAGAACT	7	-	10561172-10561221	7qA1	PREDICTED: Mus musculus similar to putative pheromone receptor, transcript variant 1 (LOC625605), mRNA.					
Mus musculus	MEEBO	ILMN_212816	ILMN_212816	PTPRD	scl0320681.1_37	XM_283979.2			38079243	XM_283979.2	Ptprd		ILMN_2630664	000520064	S	42	GTGGCAGTGCCTGGCTGTCAGTATGCTGGCCCCAATGTTGATGGACATGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197643	ILMN_197643	LOC229810	XM_124173.2	XM_124173.2			38077071	XM_124173.2	LOC229810		ILMN_1214137	002970088	S	706	GCCTCCGAGTTCTACAGGTCTGACAACTGGGGCGCCTGGCAGAAGTTCAC										
Mus musculus	RefSeq	ILMN_214706	ILMN_214706	SLC12A7	NM_011390.2	NM_011390.2		20499	118130177	NM_011390.2	Slc12a7	NP_035520.1	ILMN_2650953	007550403	S	4442	AGGCGCCTCTGCACTTTTCAAGAACCTGACAGATGATTTGCACTTTACCC	13	+	73953502-73953551	13qC1	Mus musculus solute carrier family 12, member 7 (Slc12a7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	D13Ertd261e; AA408796; Kcc4	D13Ertd261e; AA408796; Kcc4
Mus musculus	RefSeq	ILMN_191414	ILMN_242710	PTPRZ1	NM_001081306.1	NM_001081306.1		19283	124486806	NM_001081306.1	Ptprz1	NP_001074775.1	ILMN_1259579	001690239	S	7245	GCCTGGAATCTTTAGTCTAACGAAGAAAGGGTGTAGGACATCCCTCATCC	6	+	23002093-23002112:23002113-23002142	6qA3.1	Mus musculus protein tyrosine phosphatase, receptor type Z, polypeptide 1 (Ptprz1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DSD-1-PG; AI850339; Rptpbeta; PTPzeta; Ptpz; Ptprz; PTPbeta	DSD-1-PG; AI850339; Rptpbeta; PTPzeta; Ptpz; Ptprz; PTPbeta
Mus musculus	RefSeq	ILMN_215850	ILMN_315337	LOC333331	XR_032458.1	XR_032458.1		333331	149258991	XR_032458.1	LOC333331		ILMN_1256019	007200187	S	585	CGATGCTTGTTTAATTACCGAAGAGTTGGCGTATGGGTGTACAGGGGTGC	8	+	99687989-99688038	8qD1	PREDICTED: Mus musculus similar to medium-chain acyl-CoA dehydrogenase (LOC333331), misc RNA.					
Mus musculus	MEEBO	ILMN_209070	ILMN_209070	ENT2	scl000498.1_8				8698686	AF183397	Ent2		ILMN_2592247	004730068	S	209	CATTCTGGGACTGGGCACCCTTCTCCCCTGGAACTTCTTCATTACCGCCA										
Mus musculus	RefSeq	ILMN_223145	ILMN_223145	SNX6	NM_026998.2	NM_026998.2		72183	27754030	NM_026998.2	Snx6	NP_081274.2	ILMN_2896582	001440026	S	1406	CTGCCACCTCGCACTCCACCTTCCAAGAAGCCCAAAGTTCTACCCTCTCT	12	-	55668406-55668455	12qC1	Mus musculus sorting nexin 6 (Snx6), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C85963; 2010006G21Rik; 2610032J07Rik; AU018928; 2810425K19Rik	C85963; 2010006G21Rik; 2610032J07Rik; AU018928; 2810425K19Rik
Mus musculus	RefSeq	ILMN_213876	ILMN_213876	CDC2L1	NM_007661.3	NM_007661.3		12537	142350164	NM_007661.3	Cdc2l1	NP_031687.2	ILMN_2641705	002570725	S	2077	CCTTCAGCGAGTATCCCTATAACAACCTCCGCAAGAGATTTGGGGCTTTG	4	+	155023188-155023237	4qE2	Mus musculus cell division cycle 2-like 1 (Cdc2l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	Cdc2l2; CDK11-p46; CDK11-p110; CDK11-p58; p58; AA989746	Cdc2l2; CDK11-p46; CDK11-p110; CDK11-p58; p58; AA989746
Mus musculus	RefSeq	ILMN_213876	ILMN_213876	CDC2L1	NM_007661.3	NM_007661.3		12537	142350164	NM_007661.3	Cdc2l1	NP_031687.2	ILMN_1241980	006450066	S	237	GGGGAGCTGAGAGATCACCGAATGGAGATCACAATCAGGAACTCACCATA	4	+	155000922-155000971	4qE2	Mus musculus cell division cycle 2-like 1 (Cdc2l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	Cdc2l2; CDK11-p46; CDK11-p110; CDK11-p58; p58; AA989746	Cdc2l2; CDK11-p46; CDK11-p110; CDK11-p58; p58; AA989746
Mus musculus	RefSeq	ILMN_195503	ILMN_195503	ZC3HAV1	NM_028864.2	NM_028864.2		78781	142383007	NM_028864.2	Zc3hav1	NP_083140.1	ILMN_2516157	000520600	S	3294	TTGTAATCATTGTACCCATGGGGCATTTCAAGGTGGGTTTTGCTGTGGGG	6	-	38265724-38265773	6qB1	Mus musculus zinc finger CCCH type, antiviral 1 (Zc3hav1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ZAP; 1200014N16Rik; D6Bwg1452e; 2900058M19Rik; 9130009D18Rik	ZAP; 1200014N16Rik; D6Bwg1452e; 2900058M19Rik; 9130009D18Rik
Mus musculus	RefSeq	ILMN_234807	ILMN_234807	D630014A15RIK	NM_001033381.1	NM_001033381.1		319666	85701878	NM_001033381.1	D630014A15Rik	NP_001028553.1	ILMN_2780352	005690136	S	907	CCTTTCTTCTCCCTTAGGAGATATGAGATAAAGACACACTGGCCACCCTG	8	-	3153646-3153695	8qA1.1	Mus musculus RIKEN cDNA D630014A15 gene (D630014A15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212191	ILMN_212191	GBGT1	NM_139197.1	NM_139197.1		227671	21105858	NM_139197.1	Gbgt1	NP_631936.1	ILMN_2623799	005820215	S	739	TCCTCTGCCTTTGTGGCAGACAATGAGGGGGACTTCTATTATGGTGGGGC	2	+	28360610-28360659	2qA3	Mus musculus globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (Gbgt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]	Covalent attachment of a glycosyl residue to a lipid molecule [goid 30259] [evidence TAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: N-acetyl-D-galactosaminyl-(1,3)-D-galactosyl-(1,4)-D-galactosyl-(1,4)-D-glucosylceramide + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-N-acetyl-D-galactosaminyl-(1,3)-D-galactosyl-(1,4)-D-galactosyl-(1,4)-D-glucosylceramide + UDP [goid 47277] [evidence IDA]	MGC123927; Fs; Fgs	MGC123927; Fs; Fgs
Mus musculus	RefSeq	ILMN_215014	ILMN_215014	KIFAP3	NM_010629.2	NM_010629.2		16579	133893224	NM_010629.2	Kifap3	NP_034759.1	ILMN_2654532	000460086	S	3597	GGAAACCTAAGCTTCCGAACACTGCAGATCAAAGGGAAGACTTCTGCTCT	1	+	165846921-165846970	1qH2.2	Mus musculus kinesin-associated protein 3 (Kifap3), mRNA.	Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IEA]; A complex consisting of two distinct motor subunits that form a heterodimer complexed with a third non-motor accessory subunit, the kinesin associated protein or KAP; the KIF3 heterodimer interacts via its C-terminal portion with KAP, which is thought to regulate the binding of the motor to cargo membranes [goid 16939] [evidence IPI]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence TAS]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of calcium-dependent cell-cell adhesion [goid 46587] [evidence IMP]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence TAS]	SMAP; KAP3	SMAP; KAP3
Mus musculus	RefSeq	ILMN_215014	ILMN_215014	KIFAP3	NM_010629.2	NM_010629.2		16579	133893224	NM_010629.2	Kifap3	NP_034759.1	ILMN_1222022	001260719	S	2378	CCTCTGAAGGAGCCATAAGTCCAGACTTCTTCAATGATTTTCACCTCCAG	1	+	165818349-165818398	1qH2.2	Mus musculus kinesin-associated protein 3 (Kifap3), mRNA.	Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IEA]; A complex consisting of two distinct motor subunits that form a heterodimer complexed with a third non-motor accessory subunit, the kinesin associated protein or KAP; the KIF3 heterodimer interacts via its C-terminal portion with KAP, which is thought to regulate the binding of the motor to cargo membranes [goid 16939] [evidence IPI]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence TAS]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of calcium-dependent cell-cell adhesion [goid 46587] [evidence IMP]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence TAS]	SMAP; KAP3	SMAP; KAP3
Mus musculus	RefSeq	ILMN_200429	ILMN_258340	MYO1H	XM_972888.2	XM_972888.2		231646	149254534	XM_972888.2	Myo1h	XP_977982.2	ILMN_1238581	000160398	S	1468	CCCGCGACGGACTTGAGTTTCCTGGAGAAGCTGGAGGAGAAAGTGGGCAA	5	+	114788195-114788244	5qF	PREDICTED: Mus musculus myosin 1H (Myo1h), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213616	ILMN_213616	1810074P20RIK	NM_026194.2	NM_026194.2		67490	27229046	NM_026194.2	1810074P20Rik	NP_080470.1	ILMN_2927924	005260537	S	2246	GACTGGGCAGGGAGAGGATCCGTCAAGCGATGAATTAGACAAGGAACAAC	4	-	25341199-25341248	4qA3	Mus musculus RIKEN cDNA 1810074P20 gene (1810074P20Rik), mRNA.				AI429228; mKIAA0776	AI429228; mKIAA0776
Mus musculus	RefSeq	ILMN_213692	ILMN_213692	APOB48R	NM_138310.1	NM_138310.1		171504	19923862	NM_138310.1	Apob48r	NP_612183.1	ILMN_2888834	004220189	S	3462	CCGGCCTGTTCCTTGGGTGTCAGACCTTCCTGTGAAAAGATGTGGAAACA	7	+	133732469-133732518	7qF3	Mus musculus apolipoprotein B48 receptor (Apob48r), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an apolipoprotein, the protein component of a lipoprotein, to initiate a change in cell activity [goid 30226] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Apob-48r	Apob-48r
Mus musculus	RefSeq	ILMN_213692	ILMN_213692	APOB48R	NM_138310.1	NM_138310.1		171504	19923862	NM_138310.1	Apob48r	NP_612183.1	ILMN_2639734	004490195	S	2914	CGGCCACTGGAATATATCTTTTCACCCTCCCGGCCTCAGCTAAACTGGAT	7	+	133731921-133731970	7qF3	Mus musculus apolipoprotein B48 receptor (Apob48r), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an apolipoprotein, the protein component of a lipoprotein, to initiate a change in cell activity [goid 30226] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Apob-48r	Apob-48r
Mus musculus	RefSeq	ILMN_201491	ILMN_201491	LOC385252	XM_358149.1	XM_358149.1			38094557	XM_358149.1	LOC385252		ILMN_1241595	000650477	S	4	GGGGGCAGTGCTAGAACAGAGTTATTCAGTACGGTTGGTGCACAGAAAGC										
Mus musculus	RefSeq	ILMN_197205	ILMN_197205	LOC381354	XM_358556.1	XM_358556.1			38074579	XM_358556.1	LOC381354		ILMN_2527288	005900066	S	1053	CCCATTGAGGGGAGAAAAGGGCTGAGACTACTCTGTAATGGGAACAGCAC										
Mus musculus	RefSeq	ILMN_200419	ILMN_235760	LOC676929	XM_994105.1	XM_994105.1		676929	94374574	XM_994105.1	LOC676929	XP_999199.1	ILMN_1244043	005050605	S	622	GCCTCGCTGCACCCGTCTGAGAAACAAAACCAGGAAGGGTCCTCTCAAAT					PREDICTED: Mus musculus similar to delangin isoform A (LOC676929), mRNA.					
Mus musculus	RefSeq	ILMN_221674	ILMN_221674	LAMP3	NM_177356.3	NM_177356.3		239739	118601014	NM_177356.3	Lamp3	NP_796330.2	ILMN_2745667	007000433	S	1959	GATAGAGTTTGATCCGGTCTCATGCACAAGGTGCCCATGTCCCGCTTCCC	16	-	19654808-19654857	16qA3	Mus musculus lysosomal-associated membrane protein 3 (Lamp3), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TSC403; DC-LAMP; Cd208; LAMP; 1200002D17Rik; DCLAMP	TSC403; DC-LAMP; Cd208; LAMP; 1200002D17Rik; DCLAMP
Mus musculus	RefSeq	ILMN_221674	ILMN_221674	LAMP3	NM_177356.3	NM_177356.3		239739	118601014	NM_177356.3	Lamp3	NP_796330.2	ILMN_2738854	005390576	S	1946	GAAATAGGTGCCTGATAGAGTTTGATCCGGTCTCATGCACAAGGTGCCCA	16	-	19654821-19654870	16qA3	Mus musculus lysosomal-associated membrane protein 3 (Lamp3), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TSC403; DC-LAMP; Cd208; LAMP; 1200002D17Rik; DCLAMP	TSC403; DC-LAMP; Cd208; LAMP; 1200002D17Rik; DCLAMP
Mus musculus	Riken	ILMN_205272	ILMN_205272	E330035H20RIK	ri|E330035H20|PX00312F22|AK054516|2080					AK054516	E330035H20Rik		ILMN_1249877	002120687	S	1801	CCCTGGGAGCAAAAGCAACCTGCTGAAGGAGACATTACCACTTTGGCCTC										
Mus musculus	RefSeq	ILMN_196640	ILMN_196640	B230220E17RIK	XM_354862.5	XM_354862.5		320865	94398432	XM_354862.5	B230220E17Rik	XP_354862.4	ILMN_1236766	002230162	S	1956	GAGCGCCTGCCCATGAACCCAAATTTCACACTTAAGGACAATGAAGGTGA	15	+	23390775-23390824	15qA2	PREDICTED: Mus musculus RIKEN cDNA B230220E17 gene, transcript variant 1 (B230220E17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199049	ILMN_199049	LOC216138	XM_125762.2	XM_125762.2			38090608	XM_125762.2	LOC216138		ILMN_1236463	006450195	S	1164	TCTGGTGAATTTTGTGTTTGACGGAGGGACTGGCGAGACTGGAGACCGCG										
Mus musculus	RefSeq	ILMN_191362	ILMN_228539	SNORD22	NR_002896.2	NR_002896.2		83673	144226235	NR_002896.2	Snord22		ILMN_1258231	002850181	S	2327	CAAAAGGTGATTTACTTGTTTTACAGGTCTGAGGAAAAGAATGAGCTGCG	19	+	8800531-8800580	19qA	Mus musculus small nucleolar RNA, C/D box 22 (Snord22) on chromosome 19. XR_000427 XR_000465 XR_000466 XR_000467 XR_000468 XR_000469 XR_000470	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Rnu22; snoRNA U22	Rnu22; snoRNA U22
Mus musculus	RefSeq	ILMN_200586	ILMN_312416	LOC100047534	XM_001478361.1	XM_001478361.1		100047534	149255015	XM_001478361.1	LOC100047534	XP_001478411.1	ILMN_2539279	006020220	S	199	AATTTCTACAATGGTAAAGTCATGGAGAAGTCTAAACTGTTTAAGGATCA					PREDICTED: Mus musculus similar to TCRBV16S1 (LOC100047534), mRNA.					
Mus musculus	RefSeq	ILMN_215644	ILMN_215644	ZFP692	NM_182996.3	NM_182996.3		103836	100817089	NM_182996.3	Zfp692	NP_892041.2	ILMN_1217864	007150315	S	1542	AGAAGGCCTCCCTAAACTGGCACCGACGCAAGCATGCAGAGACAGCAGCT	11	+	58127708-58127757	11qB1.3	Mus musculus zinc finger protein 692 (Zfp692), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI839920; AI746306	AI839920; AI746306
Mus musculus	RefSeq	ILMN_224367	ILMN_224367	CCL19	NM_011888.2	NM_011888.2		24047	10518345	NM_011888.2	Ccl19	NP_036018.1	ILMN_2836386	004220717	S	9	ACTGGGGCACACACAAGCTCACTTGCACTTGGCTCCTGAACCCCTTCACG	4	-	42769992-42770041	4qA5	Mus musculus chemokine (C-C motif) ligand 19 (Ccl19), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	MIP3B; CKb11; exodus-3; Scya19; ELC	MIP3B; CKb11; exodus-3; Scya19; ELC
Mus musculus	MEEBO	ILMN_223872	ILMN_223872	DNAJB3	scl16502.1.45_71				6680298	NM_008299	Dnajb3		ILMN_2770825	006130128	S	740	GAGAGTTAAAGTCCCTGATAATTAATGGCAAAGAGCAGCTGCTTCGCATC								Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196503	ILMN_196503	4933411B03RIK	XM_129333.4	XM_129333.4			38085771	XM_129333.4	4933411B03Rik		ILMN_2524559	006590193	S	935	GCTCACGCTCCTTCAGTGGGCTTATCAAGCTGGGGACGAGGGACGTTGTT										
Mus musculus	MEEBO	ILMN_194390	ILMN_194390	MJ-6000-172_3824	MJ-6000-172_3824						MJ-6000-172_3824		ILMN_2506003	003850519	S	4	GCGGTTGCTGAAGAGATGATTAAAAACTCTGCTGTTTTTGGTGGAGAGCC										
Mus musculus	MEEBO	ILMN_217325	ILMN_217325	OLFR18	scl6682.1.1_319				51764768	XM_486196	Olfr18		ILMN_2681896	001980504	S	838	ACCTCAGTTCAGCTGTGTCCTTGTCTCCCAGGAAGGGTGCAGTAGCATCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_247161	ILMN_247161	6430706D22RIK	NM_198652.1	NM_198652.1		381280	38348539	NM_198652.1	6430706D22Rik	NP_941054.1	ILMN_3011719	001710332	I	4056	CCAGGGCAGCTGGTACCGTGGAAAGTGCCTGGGGTGGTTTTGCAAATAAA	1	-	90159705-90159754	1qD	Mus musculus RIKEN cDNA 6430706D22 gene (6430706D22Rik), mRNA.				mfleg1; Gm975; MGC66590	mfleg1; Gm975; MGC66590
Mus musculus	RefSeq	ILMN_222364	ILMN_222364	CENPI	NM_145924.2	NM_145924.2		102920	118130223	NM_145924.2	Cenpi	NP_666036.1	ILMN_2821788	006110646	S	2558	AGAGAGGCTAAGTAGCTCAGCATGAGTTTCCATTTCCCAAGCCGACTGGC	X	+	130896588-130896637	XqE3	Mus musculus centromere protein I (Cenpi), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]			AI504163; Fshprh1; MGC40943	AI504163; Fshprh1; MGC40943
Mus musculus	RefSeq	ILMN_219478	ILMN_219478	FBXO45	NM_173439.2	NM_173439.2		268882	56961626	NM_173439.2	Fbxo45	NP_775615.2	ILMN_2709371	007200373	S	1122	GGAAAGTAGAACCATGAAGTGATAGTATCATGTGTGCATGCCCAAGAAAC	16	-	32233072-32233121	16qB2	Mus musculus F-box protein 45 (Fbxo45), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC19444; 2610017J04Rik; MGC90920; AI463119; BC026799	MGC19444; 2610017J04Rik; MGC90920; AI463119; BC026799
Mus musculus	RefSeq	ILMN_188342	ILMN_219478	FBXO45	NM_173439.2	NM_173439.2		268882	56961626	NM_173439.2	Fbxo45	NP_775615.2	ILMN_2451855	006510541	S	3774	TAGCATCTGTCACATTCCAGCTGCAGCCACCGTGACCAGGGAAACGTGTC	16	-	32230420-32230469	16qB2	Mus musculus F-box protein 45 (Fbxo45), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC19444; 2610017J04Rik; MGC90920; AI463119; BC026799	MGC19444; 2610017J04Rik; MGC90920; AI463119; BC026799
Mus musculus	RefSeq	ILMN_217730	ILMN_217730	PSD3	NM_177698.3	NM_177698.3		234353	85540452	NM_177698.3	Psd3	NP_808366.2	ILMN_1215883	001090167	S	2859	GAAGAAGCCGAACGTGTTTAAACTCAAGACTGCGGACTGGAGGGTCTTGC	8	-	70244707-70244756	8qB3.3	Mus musculus pleckstrin and Sec7 domain containing 3 (Psd3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the ARF family of proteins switching to a GTP-bound active state [goid 32011] [evidence IC ]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IDA]	AI661273; MGC6957; D430018P08; EFA6D; BC003498; 4931420C21Rik	AI661273; MGC6957; D430018P08; EFA6D; BC003498; 4931420C21Rik
Mus musculus	RefSeq	ILMN_230539	ILMN_230539	TRPM1	NM_018752.2	NM_018752.2		17364	84370247	NM_018752.2	Trpm1	NP_061222.2	ILMN_3162921	001450044	I	4994	CCCAGCACTCAGGAGAATCAGAAATTTACAGTCATCCCTGGCTACATGGG	7	+	71414364-71414413	7qC	Mus musculus transient receptor potential cation channel, subfamily M, member 1 (Trpm1), transcript variant 1, mRNA. XM_896258 XM_896265 XM_896276 XM_896286 XM_896295 XM_896317 XM_896330 XM_896340 XM_896356 XM_896369 XM_896383 XM_919239 XM_919254 XM_919266 XM_919275 XM_919284 XM_919294	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI606771; Mlsn1; LTRPC1; 4732499L03Rik; melastatin	AI606771; Mlsn1; LTRPC1; 4732499L03Rik; melastatin
Mus musculus	RefSeq	ILMN_236869	ILMN_230539	TRPM1	NM_018752.2	NM_018752.2		17364	84370247	NM_018752.2	Trpm1	NP_061222.2	ILMN_3163501	002480435	A	4522	CCGCTCCTAGCAAATTAGACAGGGCAGGACATGCCAGCAGCACTAGCAAC	7	+	71413892-71413941	7qC	Mus musculus transient receptor potential cation channel, subfamily M, member 1 (Trpm1), transcript variant 1, mRNA. XM_896258 XM_896265 XM_896276 XM_896286 XM_896295 XM_896317 XM_896330 XM_896340 XM_896356 XM_896369 XM_896383 XM_919239 XM_919254 XM_919266 XM_919275 XM_919284 XM_919294	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI606771; Mlsn1; LTRPC1; 4732499L03Rik; melastatin	AI606771; Mlsn1; LTRPC1; 4732499L03Rik; melastatin
Mus musculus	RefSeq	ILMN_203999	ILMN_244240	C330023M02RIK	NM_172722.3	NM_172722.3		231713	142374503	NM_172722.3	C330023M02Rik	NP_766310.2	ILMN_1228917	005220070	S	2483	AGGGGACCTCTTAGAAGTTACAGATGGCAATGTGAAGACCCAGCCTGCAG	5	+	121887636-121887685	5qF	Mus musculus RIKEN cDNA C330023M02 gene (C330023M02Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	A630046C11; AI450868; 4833422K13Rik	A630046C11; AI450868; 4833422K13Rik
Mus musculus	RefSeq	ILMN_200650	ILMN_200650	MPEG1	XM_129176.3	XM_129176.3			38084865	XM_129176.3	Mpeg1		ILMN_2539511	004570750	S	1917	GACAGTCATCCATGGGACAGTAATGGAATGTCAGGAGGGGAAGCTGCTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_187310	ILMN_261472	EIF2C3	NM_153402.1	NM_153402.1		214150	23510274	NM_153402.1	Eif2c3	NP_700451.1	ILMN_1233354	006200053	S	2526	CGCTCACCTGGTGGCATTCAGAGCCAGATATCATCTTGTGGACAAGGAAC	4	-	126023881-126023930	4qD2.2	Mus musculus eukaryotic translation initiation factor 2C, 3 (Eif2c3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C130014L07Rik; Ago3; AW048688	C130014L07Rik; Ago3; AW048688
Mus musculus	RefSeq	ILMN_261472	ILMN_261472	EIF2C3	NM_153402.1	NM_153402.1		214150	23510274	NM_153402.1	Eif2c3	NP_700451.1	ILMN_2870191	003370722	S	2504	CTATCCCTGCACCAGCATATTACGCTCACCTGGTGGCATTCAGAGCCAGA	4	-	126023903-126023952	4qD2.2	Mus musculus eukaryotic translation initiation factor 2C, 3 (Eif2c3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C130014L07Rik; Ago3; AW048688	C130014L07Rik; Ago3; AW048688
Mus musculus	RefSeq	ILMN_187310	ILMN_261472	EIF2C3	NM_153402.1	NM_153402.1		214150	23510274	NM_153402.1	Eif2c3	NP_700451.1	ILMN_2642288	005260687	S	2498	CTGTTTCTATCCCTGCACCAGCATATTACGCTCACCTGGTGGCATTCAGA	4	-	126023909-126023958	4qD2.2	Mus musculus eukaryotic translation initiation factor 2C, 3 (Eif2c3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C130014L07Rik; Ago3; AW048688	C130014L07Rik; Ago3; AW048688
Mus musculus	RefSeq	ILMN_187310	ILMN_261472	EIF2C3	NM_153402.1	NM_153402.1		214150	23510274	NM_153402.1	Eif2c3	NP_700451.1	ILMN_2634914	005220379	S	658	TCAGCTCCAGAAGGATATGACCACCCTCTGGGAGGGGGCAGGGAAGTATG	4	-	126080467-126080516	4qD2.2	Mus musculus eukaryotic translation initiation factor 2C, 3 (Eif2c3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C130014L07Rik; Ago3; AW048688	C130014L07Rik; Ago3; AW048688
Mus musculus	Riken	ILMN_201664	ILMN_201664	1500015G18RIK	ri|1500015G18|R000020N15|AK005248|1104					AK005248	1500015G18Rik		ILMN_1227873	006900743	S	1	GGAAGGGGTGGAGCCTGCTGATCAGTGGCGGCTGCGGCTGAGCTTGCAGG										
Mus musculus	RefSeq	ILMN_216348	ILMN_216348	FERMT2	NM_146054.2	NM_146054.2		218952	67906178	NM_146054.2	Fermt2	NP_666166.2	ILMN_2670022	001780377	S	3083	CTATTACATCTGCGTTGGTGCTAGTTAGACAATTCCTAGCTCACGAGCCC	14	-	46078577-46078626	14qC1	Mus musculus fermitin family homolog 2 (Drosophila) (Fermt2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC36305; AA960555; Kindlin-2; Mig2	MGC36305; AA960555; Kindlin-2; Mig2
Mus musculus	RefSeq	ILMN_206703	ILMN_216348	FERMT2	NM_146054.2	NM_146054.2		218952	67906178	NM_146054.2	Fermt2	NP_666166.2	ILMN_2582084	002230349	S	415	GTTCACCCCGCAGCACAAACTGCTCCGCCTGCAGCTTCCCAACATGAAGT	14	-	46124240-46124289	14qC1	Mus musculus fermitin family homolog 2 (Drosophila) (Fermt2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC36305; AA960555; Kindlin-2; Mig2	MGC36305; AA960555; Kindlin-2; Mig2
Mus musculus	Riken	ILMN_203272	ILMN_203272	9430015L11RIK	ri|9430015L11|PX00108A12|AK034626|1687					AK034626	9430015L11Rik		ILMN_1245583	005870035	S	1619	GGCCCGGGTGTGATGCACATCTTTCCCCCTCGACCTGTTGTACTTGAAGG										
Mus musculus	MEEBO	ILMN_222027	ILMN_222027	2610020H08RIK	scl32133.19.1_3	XM_204272.3			38087385	XM_204272.3	2610020H08Rik		ILMN_2743616	004760095	S	1810	GTCGCACCCTGGCCTAGGACTGATGAAAATAAAAGAGGAAGAAGAAAGTG										
Mus musculus	RefSeq	ILMN_221311	ILMN_221311	IL4I1	NM_010215.2	NM_010215.2		14204	141802587	NM_010215.2	Il4i1	NP_034345.1	ILMN_2733778	006020224	S	1963	CCCAGCTCCTAAGCCAGCCCTCTTCAGGGCAGACAGACCACCTACACTAA	7	+	52096096-52096145	7qB4	Mus musculus interleukin 4 induced 1 (Il4i1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: a L-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 1716] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	Fig1; Fig1-ps	Fig1; Fig1-ps
Mus musculus	RefSeq	ILMN_210938	ILMN_210938	GGT6	NM_027819.2	NM_027819.2		71522	117647221	NM_027819.2	Ggt6	NP_082095.2	ILMN_2803258	007650497	S	1570	CCCTTTCAGGGGTATTAACAGAGGGGCAGAGGTGTCTGGAACTTGAGAGC	11	+	72251654-72251671:72251672-72251703	11qB4	Mus musculus gamma-glutamyltransferase 6 (Ggt6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IEA]	9030405D14Rik; AW490214; AI427679; RP23-48A2.2	9030405D14Rik; AW490214; AI427679; RP23-48A2.2
Mus musculus	MEEBO	ILMN_224200	ILMN_224200	CSND	scl27637.13.1_73				7106272	NM_009973	Csnd		ILMN_2776470	000670307	S	667	TCTTCACTTCTGCTCCCATGTCACTGAACCACATTCTTTTCAAAAAATAA										
Mus musculus	MEEBO	ILMN_184727	ILMN_184727	GTF3C4	scl19491.1.383_5				27370485	NM_172977	Gtf3c4		ILMN_2421064	005420402	S	2	TGCCTCAGATTGGTGTGGCCATTTCTTGTCTGCTCTTTCTTGAAGCTAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200589	ILMN_200589	LOC384363	XM_357600.1	XM_357600.1			38083975	XM_357600.1	LOC384363		ILMN_1247189	004860398	S	124	ATCTCACTTTGGACAGTGGTGTCCGGGTCCCTTGAGAATGATGGGGTCTG										
Mus musculus	RefSeq	ILMN_218515	ILMN_218515	RAC3	NM_133223.4	NM_133223.4		170758	146149075	NM_133223.4	Rac3	NP_573486.1	ILMN_1218393	005340594	S	511	TACGATTGAACGGCTGCGGGACAAGAAGCTGGCACCCATAACCTACCCCC				11qE2	Mus musculus RAS-related C3 botulinum substrate 3 (Rac3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISO]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence ISO]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence ISO]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence ISO]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rac1B	Rac1B
Mus musculus	Riken	ILMN_205444	ILMN_205444	E330027G05RIK	ri|E330027G05|PX00212P19|AK054453|4673					AK054453	E330027G05Rik		ILMN_1244653	002900609	S	4212	GTGCCCAACAGTAGGTTGGTCTGTAGGGTAGGGAGTCATTCTGGATCATG										
Mus musculus	Riken	ILMN_202710	ILMN_202710	EPB4.1	ri|5330430I10|PX00054D05|AK019923|2181					AK019923	Epb4.1		ILMN_1227136	001690463	S	1831	GGGTCAGAGGGTTCAGCTCGCCACTGCCTGCAAGAGGATTTGATTTGGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISS]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISS]; Interacting selectively with spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers [goid 30507] [evidence ISS]		
Mus musculus	MEEBO	ILMN_209235	ILMN_209235	LOC381286	scl0381286.1_34				41235742	NM_201363	LOC381286		ILMN_2769409	004890647	S	1030	GCCTCGGGGGAGGAAGTCATTTTAAGATTAGCACAGGTAGCAGATTTCCG										
Mus musculus	RefSeq	ILMN_213834	ILMN_213834	AA536717	NM_172379.1	NM_172379.1		105428	27369502	NM_172379.1	AA536717	NP_759011.1	ILMN_2641269	006370551	S	788	GTTAGGGTACCCTCCCATTGCGCCATTTCACTGCATGAAAGAGGATGTTC	14	+	19151865-19151914	14qA3	Mus musculus expressed sequence AA536717 (AA536717), transcript variant 2, mRNA.				mKIAA0974; MGC32264	mKIAA0974; MGC32264
Mus musculus	RefSeq	ILMN_228513	ILMN_228513	GM1604	NM_001033442.1	NM_001033442.1		381059	85701954	NM_001033442.1	Gm1604	NP_001028614.1	ILMN_2824625	007320750	S	601	CCCCGAGCCGCTGTATCTGCATAACTAGAGAGGAGGCAGAACTCAGCACC	17	+	6937100-6937125:6937126-6937149	17qA1	Mus musculus gene model 1604, (NCBI) (Gm1604), mRNA.					
Mus musculus	RefSeq	ILMN_209527	ILMN_209527	RARRES2	NM_027852.2	NM_027852.2		71660	142388214	NM_027852.2	Rarres2	NP_082128.1	ILMN_2596655	001260528	S	651	TCGTCTCCCAGAGACTTTCAACTCCAGGCTAATAAAATTGCTGAGTCTGT	6	-	48519704-48519753	6qB2.3	Mus musculus retinoic acid receptor responder (tazarotene induced) 2 (Rarres2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AI303516; 0610007L05Rik	AI303516; 0610007L05Rik
Mus musculus	RefSeq	ILMN_208659	ILMN_209527	RARRES2	NM_027852.2	NM_027852.2		71660	142388214	NM_027852.2	Rarres2	NP_082128.1	ILMN_2588295	004200291	S	466	CAGAATTGGGCAGTGGACTATCCGGCCTAGAATTTTACCCTTGGGGTCCA	6	-	48520024-48520058:48520243-48520257	6qB2.3	Mus musculus retinoic acid receptor responder (tazarotene induced) 2 (Rarres2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AI303516; 0610007L05Rik	AI303516; 0610007L05Rik
Mus musculus	Riken	ILMN_202011	ILMN_202011	2610009O05RIK	ri|2610009O05|ZX00044P04|AK011367|1034					AK011367	2610009O05Rik		ILMN_2546349	002140376	S	383	AGCAGATCTGTTGTCATCTCTTTTGCTCCTCCCAAACTGAGATTTGCAAC										
Mus musculus	RefSeq	ILMN_190905	ILMN_315501	OSBP	NM_001033174.1	NM_001033174.1		76303	133504508	NM_001033174.1	Osbp	NP_001028346.1	ILMN_1252431	000130152	S	4185	GGATTTTACTGGGTAAATTAGTATTTTCAGTCCGTTCCCACTGACTCTCC	19	+	12068202-12068251	19qA	Mus musculus oxysterol binding protein (Osbp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]		mKIAA4220; 1110018F06Rik; KIAA4220; AW559088	mKIAA4220; 1110018F06Rik; KIAA4220; AW559088
Mus musculus	RefSeq	ILMN_199847	ILMN_199847	LOC383082	XM_356850.1	XM_356850.1			38077957	XM_356850.1	LOC383082		ILMN_1252142	000540333	S	189	GGACCTGCTGGTGCGCAAGAAACATGTGGTGTTCTGCTTCCAAGATGCCC										
Mus musculus	RefSeq	ILMN_188879	ILMN_188879	A	NM_015770.3	NM_015770.3		50518	134031989	NM_015770.3	a	NP_056585.2	ILMN_2456526	001780020	S	502	AGCTTCGGGAACGGGTGATTGGGCGGGGCTTCAGGGTCCCGCGCTTCTAG	2	+	154876558-154876607	2qH1	Mus musculus nonagouti (a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IEA]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [evidence IGI]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IMP]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IGI]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IMP]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ASP; A<y>; ASIP; As	ASP; A<y>; ASIP; As
Mus musculus	RefSeq	ILMN_188879	ILMN_188879	A	NM_015770.3	NM_015770.3		50518	134031989	NM_015770.3	a	NP_056585.2	ILMN_1228049	005890291	S	416	TCCTGCCAGTGCCGTTTCTTCGGCAGCGCCTGCACCTGTCGAGTACTCAA	2	+	154876472-154876521	2qH1	Mus musculus nonagouti (a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IEA]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [evidence IGI]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IMP]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IGI]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IMP]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ASP; A<y>; ASIP; As	ASP; A<y>; ASIP; As
Mus musculus	RefSeq	ILMN_197925	ILMN_197925	LOC381033	XM_358490.1	XM_358490.1			38079694	XM_358490.1	LOC381033		ILMN_2529850	005220563	S	184	CTTAGCAGGGGTGACTCTCCTGTTGCCGAACCTGTCACTCAGCCTGGTGC										
Mus musculus	RefSeq	ILMN_189930	ILMN_228933	ZBTB26	NM_199025.2	NM_199025.2		320633	71037368	NM_199025.2	Zbtb26	NP_950190.2	ILMN_2465683	004150113	S	5039	CTCCAAACTGAAGTGGCTCTGAGGTAAATCAGGTGTGATTTTGCATTAGT	2	-	37287866-37287915	2qB	Mus musculus zinc finger and BTB domain containing 26 (Zbtb26), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC130361; MGC130360; A630026F21Rik	MGC130361; MGC130360; A630026F21Rik
Mus musculus	RefSeq	ILMN_189930	ILMN_228933	ZBTB26	NM_199025.2	NM_199025.2		320633	71037368	NM_199025.2	Zbtb26	NP_950190.2	ILMN_1212854	000990273	S	2255	CTGCTTCCTGCCGTTTGTACTTTTTTGGAGCTGCTGTGGAGAAGTGTGTG	2	-	37290650-37290699	2qB	Mus musculus zinc finger and BTB domain containing 26 (Zbtb26), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC130361; MGC130360; A630026F21Rik	MGC130361; MGC130360; A630026F21Rik
Mus musculus	RefSeq	ILMN_211366	ILMN_211366	ACCN3	NM_183000.1	NM_183000.1		171209	33695147	NM_183000.1	Accn3	NP_892045.1	ILMN_2830611	007610541	S	2061	AGTGCTGTCACCAAGACACTCGCTGCCTCCCACCGTACCTGTTACCTCGT	5	+	23923502-23923551	5qA3	Mus musculus amiloride-sensitive cation channel 3 (Accn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IMP]; The series of events in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50907] [evidence IMP]; The series of events involved in the perception of pain in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50968] [evidence IMP]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IMP]; The series of events in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50974] [evidence IMP]; The series of events in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50961] [evidence IMP]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence TAS]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP];  [goid 15280] [evidence ISO]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	ASIC3; AW742291; TNAC1; SLNAC1; DRASIC	ASIC3; AW742291; TNAC1; SLNAC1; DRASIC
Mus musculus	RefSeq	ILMN_222800	ILMN_231829	NFKBIZ	NM_030612.2	NM_030612.2		80859	142369760	NM_030612.2	Nfkbiz	NP_085115.1	ILMN_2755008	006650458	S	3970	CAGATATTTGGCATCTCTAAGGTGGAATGAGCCCACTCCACACACTGATA	16	-	55811538-55811587	16qC1.1	Mus musculus nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta (Nfkbiz), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]		AA408868; Mail; INAP	AA408868; Mail; INAP
Mus musculus	RefSeq	ILMN_206658	ILMN_208707	PRMT6	NM_178891.4	NM_178891.4		99890	126432553	NM_178891.4	Prmt6	NP_849222.3	ILMN_1245701	004880093	S	1901	GTAAAGCAGTCTGATAGGGAAGGTTGCTGAACCTAGCCCAAGGGCGGACC	3	-	110051966-110052015	3qF3	Mus musculus protein arginine N-methyltransferase 6 (Prmt6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	BB233495; Hrmt1l6; AW124876	BB233495; Hrmt1l6; AW124876
Mus musculus	RefSeq	ILMN_204664	ILMN_208707	PRMT6	NM_178891.4	NM_178891.4		99890	126432553	NM_178891.4	Prmt6	NP_849222.3	ILMN_1221973	007550243	S	2237	GCTGCTACTTGTCTTGGTGTCAAAGCTCCTGCAGAACTCAGCTTCAGAAC	3	-	110051630-110051679	3qF3	Mus musculus protein arginine N-methyltransferase 6 (Prmt6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	BB233495; Hrmt1l6; AW124876	BB233495; Hrmt1l6; AW124876
Mus musculus	RefSeq	ILMN_208707	ILMN_208707	PRMT6	NM_178891.4	NM_178891.4		99890	126432553	NM_178891.4	Prmt6	NP_849222.3	ILMN_3007271	002650564	S	1221	CGCCTATGCAAGTTGGGGACATAGCTGTCTCTTTTACCTCACCGCTCCAG	3	-	110052646-110052695	3qF3	Mus musculus protein arginine N-methyltransferase 6 (Prmt6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	BB233495; Hrmt1l6; AW124876	BB233495; Hrmt1l6; AW124876
Mus musculus	Riken	ILMN_205373	ILMN_205373	D130019P04RIK	ri|D130019P04|PX00183C08|AK051232|1033					AK051232	D130019P04Rik		ILMN_1241252	004200463	S	688	GATCTTAAAGGGTCCCATCTTCAGTGTGGGGACAAGGGGCACCTCCGTGC										
Mus musculus	RefSeq	ILMN_220570	ILMN_220570	MED6	NM_027213.2	NM_027213.2		69792	27754026	NM_027213.2	Med6	NP_081489.2	ILMN_2723907	003290577	S	777	TCGCTATACCTCAGCACCGTGGGAGGCTCTTGAGCCTGGAAACACTATCG	12	-	82674728-82674777	12qD1	Mus musculus mediator of RNA polymerase II transcription, subunit 6 homolog (yeast) (Med6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]	1500012F11Rik; AU019660; AV213303	1500012F11Rik; AU019660; AV213303
Mus musculus	RefSeq	ILMN_195228	ILMN_195228	ZFP160	NM_145483.1	NM_145483.1		224585	21703953	NM_145483.1	Zfp160	NP_663458.1	ILMN_2867013	005820619	S	3113	GGCCAGAGTCCAACCTGATGAATGTGAAGGGTCTCTCTTCTCAGGAAACT	17	+	21165171-21165220	17qA3.2	Mus musculus zinc finger protein 160 (Zfp160), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	6720480D16Rik; mKIAA1611; KR18; mszf47; F11; HZF5; HKr18	6720480D16Rik; mKIAA1611; KR18; mszf47; F11; HZF5; HKr18
Mus musculus	RefSeq	ILMN_222905	ILMN_222905	EEFSEC	NM_023060.3	NM_023060.3		65967	111038122	NM_023060.3	Eefsec	NP_075547.1	ILMN_2849985	004220142	S	2329	TTAGTACCCTGGGGTTCCATCCTTGCACGAGAGGTCAATAGGCCCTGGCC	6	-	88207628-88207677	6qD1	Mus musculus eukaryotic elongation factor, selenocysteine-tRNA-specific (Eefsec), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [evidence IMP]; The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [evidence IDA]; The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IDA]; Interacting selectively with transfer RNA [goid 49] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	Selb; sec	Selb; sec
Mus musculus	RefSeq	ILMN_212894	ILMN_212894	ADIPOR1	NM_028320.3	NM_028320.3		72674	88853586	NM_028320.3	Adipor1	NP_082596.2	ILMN_1213531	004560373	S	1773	ACCTGGTCCCATCTTTCTAGGACAAACAAAGCCACGCCTTGATGTAGCCC	1	+	136328667-136328716	1qE4	Mus musculus adiponectin receptor 1 (Adipor1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The removal of one or more electrons from a fatty acid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen [goid 19395] [evidence ISS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence ISS]	Interacting selectively with any hormone, naturally occurring substances secreted by specialized cells that affect the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42562] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Paqr1; ACDCR1; 2810031L11Rik; CGI-45	Paqr1; ACDCR1; 2810031L11Rik; CGI-45
Mus musculus	MEEBO	ILMN_196283	ILMN_196283	SLC35A3	scl21606.12_118				27777651	NM_144902	Slc35a3		ILMN_2649961	005390653	S	3743	AGGCACGTGTGAGTTCATGGGGAAGAAGCCTGCCAGCTGAGAGCTGTAGT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]		
Mus musculus	MEEBO	ILMN_196283	ILMN_196283	SLC35A3	scl21606.12_118				27777651	NM_144902	Slc35a3		ILMN_1239065	002680348	S	3737	CACTAAAGGCACGTGTGAGTTCATGGGGAAGAAGCCTGCCAGCTGAGAGC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]		
Mus musculus	Riken	ILMN_202984	ILMN_202984	5832402A02RIK	ri|5832402A02|PX00041I21|AK031027|3087					AK031027	5832402A02Rik		ILMN_1232937	003420093	S	2154	GCCCTCTAGTGGTCAGAGTGCAGAGATTCACGGAGCAAGACTGACATCTG										
Mus musculus	RefSeq	ILMN_200533	ILMN_200533	LOC383301	XM_356973.1	XM_356973.1			38083408	XM_356973.1	LOC383301		ILMN_2588074	000360192	S	158	CACTGAGCACCGAGTATGCACTCACTGTGTCCCTGAGCACTGAGTATGCA										
Mus musculus	RefSeq	ILMN_219954	ILMN_219954	IGSF6	NM_030691.1	NM_030691.1		80719	13540502	NM_030691.1	Igsf6	NP_109616.1	ILMN_2715673	005670382	S	1906	GGGGCTTGACATGGATTGTTCTTTGAATATAAGTACCAACAAGGACACAC	7	-	128207758-128207807	7qF2	Mus musculus immunoglobulin superfamily, member 6 (Igsf6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_223210	ILMN_223210	UBASH3B	NM_176860.5	NM_176860.5		72828	146198708	NM_176860.5	Ubash3b	NP_789830.1	ILMN_2760810	000540382	S	2819	GGAGATTGACATTTGAAAGGATGTTATGTTGGATTCACTATTTGGATCAG				9qA5.1	Mus musculus ubiquitin associated and SH3 domain containing, B (Ubash3b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			BB125008; p70	BB125008; p70
Mus musculus	MEEBO	ILMN_214882	ILMN_214882	ITGA8	scl19675.32_163	XM_140813.3			38074441	XM_140813.3	Itga8		ILMN_1227552	001030066	S	5265	AGAGAACTCTTAGGGTGAAATGGGAACTGTGGGAGACAACCCATATGGGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220547	ILMN_220547	DSC1	NM_013504.3	NM_013504.3		13505	142362408	NM_013504.3	Dsc1	NP_038532.2	ILMN_2723533	001710132	S	3127	GCATGCTATGCAAGACTCCATAATGGAGTTGGGTATTGTGGAAGCTTAAA	18	-	20243709-20243758	18qA2	Mus musculus desmocollin 1 (Dsc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Dsc1a; Dsc1b; MGC129348	Dsc1a; Dsc1b; MGC129348
Mus musculus	Riken	ILMN_204907	ILMN_204907	C130048P03RIK	ri|C130048P03|PX00170M03|AK048318|3401					AK048318	C130048P03Rik		ILMN_1241907	006940154	S	3024	GGGCACAGCTCCCTTTGTGGACATGGGCTTTCAAATTAGGTTCCCAACAC										
Mus musculus	RefSeq	ILMN_199736	ILMN_240384	LOC668772	XR_002245.1	XR_002245.1		668772	94397358	XR_002245.1	LOC668772		ILMN_1247346	000450129	S	405	GGCTCCCATGATCCCCAAGGCTAAAATAGAGAAGAGGACTCCCAGTCATG	14	+	109661316-109661365	14qE3-qE4	PREDICTED: Mus musculus similar to cytoplasmic beta-actin (LOC668772), mRNA.					
Mus musculus	RefSeq	ILMN_200030	ILMN_200030	LOC383133	XM_356893.1	XM_356893.1			38079920	XM_356893.1	LOC383133		ILMN_2537347	006480286	S	278	AATCCAAATTGTCTCAGAACAATTTTGCTCTTGGTTACAGAGCTACAGAA										
Mus musculus	MEEBO	ILMN_196198	ILMN_196198	SCL0004029.1_17	scl0004029.1_17	AK014004.1			12851615	AK014004.1	scl0004029.1_17		ILMN_1215363	002320338	S	1380	CCCAGATGTTAGTGCCTGTGAGTGGCTGATGTATTCTGCTTCACTGGGGT										
Mus musculus	RefSeq	ILMN_254098	ILMN_254098	OLFR855	NM_146524.1	NM_146524.1		258517	33239269	NM_146524.1	Olfr855	NP_666735.1	ILMN_2928479	007550193	S	796	GCCTCACCAGGAAAATCTGCAGTGGCTTCAGTGATGTACTCTGTGCTTCC	9	+	19389778-19389827	9qA2	Mus musculus olfactory receptor 855 (Olfr855), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR148-1	MOR148-1
Mus musculus	RefSeq	ILMN_223507	ILMN_223507	ORMDL2	NM_024180.3	NM_024180.3		66844	31581579	NM_024180.3	Ormdl2	NP_077142.1	ILMN_2764920	003990768	S	1393	CAAACTTAAAAAAATACAAACCCTTGGCTAACAAGGGGGCCTCTGGGAAC	10	-	128220981-128221030	10qD3	Mus musculus ORM1-like 2 (S. cerevisiae) (Ormdl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			0610012C09Rik	0610012C09Rik
Mus musculus	RefSeq	ILMN_223507	ILMN_223507	ORMDL2	NM_024180.3	NM_024180.3		66844	31581579	NM_024180.3	Ormdl2	NP_077142.1	ILMN_2764923	001190228	S	1392	ACAAACTTAAAAAAATACAAACCCTTGGCTAACAAGGGGGCCTCTGGGAA	10	-	128220982-128221031	10qD3	Mus musculus ORM1-like 2 (S. cerevisiae) (Ormdl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			0610012C09Rik	0610012C09Rik
Mus musculus	RefSeq	ILMN_186277	ILMN_186277	WDR17	NM_028220.2	NM_028220.2		244484	23957687	NM_028220.2	Wdr17	NP_082496.2	ILMN_2434160	000510477	S	4020	AGTTTTGTAAAAAGGAAATTTGGGGTATTTATAACCTTCATTTTGGTGGT	8	-	55715057-55715106	8qB1.3	Mus musculus WD repeat domain 17 (Wdr17), mRNA.				MGC40755; 3010002I12Rik; B230207L18Rik	MGC40755; 3010002I12Rik; B230207L18Rik
Mus musculus	RefSeq	ILMN_186277	ILMN_186277	WDR17	NM_028220.2	NM_028220.2		244484	23957687	NM_028220.2	Wdr17	NP_082496.2	ILMN_1241564	004670279	S	3805	CGTGACTGGATCAAATCTTCCAAGCCATTCAGACATTCACATCTCTTGTC	8	-	55717674-55717723	8qB1.3	Mus musculus WD repeat domain 17 (Wdr17), mRNA.				MGC40755; 3010002I12Rik; B230207L18Rik	MGC40755; 3010002I12Rik; B230207L18Rik
Mus musculus	Riken	ILMN_203946	ILMN_203946	GALC	ri|A430075I03|PX00138C09|AK040189|4440					AK040189	Galc		ILMN_1253461	003370333	S	4215	AGCTCATGAATTACCACAGGCGGAACATCCATATGGACCTGTCACCAGGG						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6683] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the reaction: D-galactosyl-N-acylsphingosine + H2O = D-galactose + N-acylsphingosine [goid 4336] [evidence IMP]		
Mus musculus	Riken	ILMN_206831	ILMN_206831	D930019E21RIK	ri|D930019E21|PX00201O02|AK086298|4404					AK086298	D930019E21Rik		ILMN_2582996	006840386	S	4237	TCCACGCTGGTCTGCACTGCGTTTGTTTACACTATGGCTGAGGAACACGC										
Mus musculus	RefSeq	ILMN_215446	ILMN_215446	MAP2K3	NM_008928.3	NM_008928.3		26397	145966887	NM_008928.3	Map2k3	NP_032954.1	ILMN_2659644	002100358	S	1776	CTCAGACAGCCTCTGGTTACCACCTTTAGTGGTATCTGCCTTTCCCTTTG				11qB2	Mus musculus mitogen activated protein kinase kinase 3 (Map2k3), mRNA.		The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42035] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IDA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AW212142; MEK3; mMKK3b; MKK3; Prkmk3	AW212142; MEK3; mMKK3b; MKK3; Prkmk3
Mus musculus	RefSeq	ILMN_223500	ILMN_223500	6620401K05RIK	NM_172774.2	NM_172774.2		235610	142356371	NM_172774.2	6620401K05Rik	NP_766362.1	ILMN_1225014	002600553	S	2230	AGCAGACGATACGCTGTCTGCGGGACACTGTGCTGCTGCTGCATAGCCTA	9	-	108962894-108962943	9qF2	Mus musculus RIKEN cDNA 6620401K05 gene (6620401K05Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]		5930438A12; MGC90531	5930438A12; MGC90531
Mus musculus	RefSeq	ILMN_199947	ILMN_199947	LOC381589	XM_358627.1	XM_358627.1			38079129	XM_358627.1	LOC381589		ILMN_1248628	000540703	S	529	CCCCTCTGCCTGTCACCCTGGATGTAGACAATGCGGAACTCGCCACAAGT										
Mus musculus	RefSeq	ILMN_218350	ILMN_218350	PRSS34	NM_178372.2	NM_178372.2		328780	31342000	NM_178372.2	Prss34	NP_848459.1	ILMN_1239878	002230431	S	907	GGTGATGAGCTACGTGTCCTGGATCAAATGCTATGTCCCCACGTTCCTAG	17	+	25436797-25436846	17qA3.3	Mus musculus protease, serine, 34 (Prss34), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IC ]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Mcp11; C130091P12; mMcp-11; MGC130546	Mcp11; C130091P12; mMcp-11; MGC130546
Mus musculus	RefSeq	ILMN_196907	ILMN_254405	EG632964	XM_907275.3	XM_907275.3		632964	149233985	XM_907275.3	EG632964	XP_912368.3	ILMN_1252421	003990112	S	215	TCGGTGCAGACGGTGTGAGTAGTTTAAGGAGACCAAATGAAGCTCTGCCC				1qC1.2	PREDICTED: Mus musculus predicted gene, EG632964 (EG632964), mRNA.					
Mus musculus	RefSeq	ILMN_196496	ILMN_252034	TTC9C	NM_027412.3	NM_027412.3		70387	142378463	NM_027412.3	Ttc9c	NP_081688.2	ILMN_1223685	006060358	S	640	TTCCACCTGCAAGACTATGACCGGGCTCGACACCACCTGCTTGCTGCTGT	19	-	8890360-8890409	19qA	Mus musculus tetratricopeptide repeat domain 9C (Ttc9c), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	6330408J23Rik; 2210019E14Rik	6330408J23Rik; 2210019E14Rik
Mus musculus	RefSeq	ILMN_196496	ILMN_252034	TTC9C	NM_027412.3	NM_027412.3		70387	142378463	NM_027412.3	Ttc9c	NP_081688.2	ILMN_1223177	003800438	S	1124	GAGTAAGGACAGGCAAACAGGAATCTTCTGTAGTATCTTCAGATGCTTTT	19	-	8885861-8885910	19qA	Mus musculus tetratricopeptide repeat domain 9C (Ttc9c), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	6330408J23Rik; 2210019E14Rik	6330408J23Rik; 2210019E14Rik
Mus musculus	RefSeq	ILMN_196496	ILMN_252034	TTC9C	NM_027412.3	NM_027412.3		70387	142378463	NM_027412.3	Ttc9c	NP_081688.2	ILMN_1233738	001230608	S	3220	ATCCACTTGTCTAATTGGAGTCAATTAGGTCCAATCTCTGTGTCCCGCTG	19	-	8883765-8883814	19qA	Mus musculus tetratricopeptide repeat domain 9C (Ttc9c), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	6330408J23Rik; 2210019E14Rik	6330408J23Rik; 2210019E14Rik
Mus musculus	Riken	ILMN_205049	ILMN_205049	A830005M13RIK	ri|A830005M13|PX00154I07|AK043527|2501					AK043527	A830005M13Rik		ILMN_2569599	005130079	S	1816	ACACTGGCAAACAGCTTCCCCAAGTGCCAGCAGTGTGTCTGGGGATACAC										
Mus musculus	RefSeq	ILMN_215527	ILMN_215527	CLK3	NM_007713.3	NM_007713.3		102414	83745111	NM_007713.3	Clk3	NP_031739.3	ILMN_2801404	004880343	S	2143	GATGTTAGAGTTCGACCCTGCTCAGCGCATCACATTGGCAGAAGCCTTGC	9	-	57549149-57549198	9qB	Mus musculus CDC-like kinase 3 (Clk3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC103028; MGC36552; AI256811	MGC103028; MGC36552; AI256811
Mus musculus	RefSeq	ILMN_234678	ILMN_234678	SNX2	NM_026386.1	NM_026386.1		67804	13385877	NM_026386.1	Snx2	NP_080662.1	ILMN_2783010	004560528	S	1565	CCATTGCCTAGCCTTACCCCTGTGAAGGAGACATTGGATTCCCCAGTGAG	18	+	53380066-53380076:53380077-53380115	18qD1	Mus musculus sorting nexin 2 (Snx2), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	0610030A03Rik	0610030A03Rik
Mus musculus	RefSeq	ILMN_216087	ILMN_216087	GEM	NM_010276.2	NM_010276.2		14579	141802514	NM_010276.2	Gem	NP_034406.1	ILMN_2667181	006840274	S	1456	CTGCTCCAGTGAAGAGAATTGTTAGAATTTGCTGGAAACTGAGGCTTACT	4	+	11641349-11641398	4qA1	Mus musculus GTP binding protein (gene overexpressed in skeletal muscle) (Gem), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AV020497	AV020497
Mus musculus	RefSeq	ILMN_200169	ILMN_200169	LOC385854	XM_358973.1	XM_358973.1			38080770	XM_358973.1	LOC385854		ILMN_1214580	002060332	S	265	TCCACATGTGACTCAGACACTCCACAAGACCTTCCTGGAAGACAGCCATC										
Mus musculus	RefSeq	ILMN_246578	ILMN_246578	TAAR5	NM_001009574.1	NM_001009574.1		215854	57529082	NM_001009574.1	Taar5	NP_001009574.1	ILMN_2995844	002970133	S	315	CCTGTGCCGTCTGCATACCTATCTGGACACGCTGTTCTGTCTCACCTCCA	10	+	23690826-23690875	10qA4	Mus musculus trace amine-associated receptor 5 (Taar5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm227	Gm227
Mus musculus	RefSeq	ILMN_199006	ILMN_246578	TAAR5	NM_001009574.1	NM_001009574.1		215854	57529082	NM_001009574.1	Taar5	NP_001009574.1	ILMN_1223274	005860400	S	752	CCAAGACGCTGGGCATTGCTGTGGGCATCTACCTTGTGTGTTGGCTTCCC	10	+	23691263-23691312	10qA4	Mus musculus trace amine-associated receptor 5 (Taar5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm227	Gm227
Mus musculus	MEEBO	ILMN_187969	ILMN_187969	SCL000490.1_983	scl000490.1_983	AK076578.1			26096889	AK076578.1	scl000490.1_983		ILMN_1225849	000360731	S	16	CAATTGTGAGCTCTGCCATAATAGAAAACTAAGGCTGCAGGCTTCTCCCC										
Mus musculus	RefSeq	ILMN_186607	ILMN_249086	2010109I03RIK	NM_025929.2	NM_025929.2		67038	114842381	NM_025929.2	2010109I03Rik	NP_080205.1	ILMN_2617977	004540390	S	1659	AATGAAGGCAGATAGGCTGCTCCTGGACACATGATTGGGAAGGGCAAGCT	15	-	74708944-74708993	15qD3	Mus musculus RIKEN cDNA 2010109I03 gene (2010109I03Rik), mRNA.					
Mus musculus	Riken	ILMN_202236	ILMN_202236	4833409F13RIK	ri|4833409F13|PX00027P22|AK014669|1264					AK014669	4833409F13Rik		ILMN_1240951	007150767	S	1015	GCTTGAGGGGTATGAATAGAGGCAGATGTGACACAGCTGGTGTGAGTCAG										
Mus musculus	Riken	ILMN_204983	ILMN_204983	DCC	ri|C530046D04|PX00083C15|AK049746|3857					AK049746	Dcc		ILMN_1230591	006450356	S	3549	AGTATTCTGTGGAAGGGTAGGCTCGGGGATGTAGTCATTGAGGTGCAGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process by which the anatomical structures of the spinal cord ventral commissure are generated and organized. Morphogenesis pertains to the creation of form [goid 21965] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222958	ILMN_257544	4930402F06RIK	NM_001080709.1	NM_001080709.1		74854	123959717	NM_001080709.1	4930402F06Rik	NP_001074178.1	ILMN_1222107	007550390	S	1295	GCATTTCTGAACTGTGGAGTATCAATTTTCTTGGAAAATTAGCAGCTGGC	2	-	35231109-35231158	2qB	Mus musculus RIKEN cDNA 4930402F06 gene (4930402F06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_233379	ILMN_314452	9230020A06RIK	XR_035440.1	XR_035440.1		619299	149262216	XR_035440.1	9230020A06Rik		ILMN_3161607	007200707	S	1593	GATCTGGTCTGACTGTGACTCACTGGGCCTGAATGAATTACCCCTTCCCC				11qB4	PREDICTED: Mus musculus RIKEN cDNA 9230020A06 gene (9230020A06Rik), misc RNA.					
Mus musculus	Riken	ILMN_206451	ILMN_206451	C230073G03RIK	ri|C230073G03|PX00176O19|AK082635|2435					AK082635	C230073G03Rik		ILMN_2580171	005960458	S	1990	GGCCAACCTGTGCTGTTGCATAAGTCAATACAAACAACCACACAGAGCAC										
Mus musculus	RefSeq	ILMN_223589	ILMN_223589	SCD2	NM_009128.1	NM_009128.1		20250	6677862	NM_009128.1	Scd2	NP_033154.1	ILMN_2919259	005820521	S	4124	GCAGGATTGCCTCTGGGGACCTCGTTTTGGGAACTTTTCTTGGGGCTGTT	19	+	44380437-44380486	19qC3	Mus musculus stearoyl-Coenzyme A desaturase 2 (Scd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence IEA]	Scd-2	Scd-2
Mus musculus	Riken	ILMN_203783	ILMN_203783	A230055O06RIK	ri|A230055O06|PX00128O05|AK038696|2491					AK038696	A230055O06Rik		ILMN_2559943	006480241	S	2147	GAACTGGATATATGGACCAGGCTGGCCGCGAACTCAGAGATCCACCTCCC										
Mus musculus	RefSeq	ILMN_198621	ILMN_328329	LOC245573	XR_032255.1	XR_032255.1		245573	149272098	XR_032255.1	LOC245573		ILMN_1250098	005570528	S	1000	GATGCAGGAGCACTTGCAGTCCCCAAAACAAACATTCAGAAGGAGGCCAC				XqE1	PREDICTED: Mus musculus similar to nuclear pore-targeting complex component of 58 kDa (LOC245573), misc RNA.					
Mus musculus	RefSeq	ILMN_211473	ILMN_211473	CHRM1	NM_007698.2	NM_007698.2		12669	31542387	NM_007698.2	Chrm1	NP_031724.2	ILMN_1238387	000050470	S	3074	CCTTAGGGCACAACCTAAGCATTGTTTTGGTAAGGGAAGTTCCCAAAGCC	19	+	8755315-8755364	19qA	Mus musculus cholinergic receptor, muscarinic 1, CNS (Chrm1), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of locomotion of a cell or organism [goid 40012] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4981] [evidence IEA]	M1R; M1; Chrm-1	M1R; M1; Chrm-1
Mus musculus	RefSeq	ILMN_211473	ILMN_211473	CHRM1	NM_007698.2	NM_007698.2		12669	31542387	NM_007698.2	Chrm1	NP_031724.2	ILMN_2889376	003290546	S	3329	CCCAGAGTAACCAGGCACAAAATGCCAATTCTTTTCCCAGGAAGTCACAG	19	+	8755570-8755619	19qA	Mus musculus cholinergic receptor, muscarinic 1, CNS (Chrm1), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of locomotion of a cell or organism [goid 40012] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4981] [evidence IEA]	M1R; M1; Chrm-1	M1R; M1; Chrm-1
Mus musculus	RefSeq	ILMN_214848	ILMN_214848	GNB2L1	NM_008143.3	NM_008143.3		14694	142376464	NM_008143.3	Gnb2l1	NP_032169.1	ILMN_2652645	001570039	S	901	TTGTAGATGAATTGAAGCAAGAAGTTATCAGCACCAGCAGCAAGGCAGAG	11	+	48619066-48619115	11qB1.2	Mus musculus guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1 (Gnb2l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISA]; Interacting selectively with protein kinase C [goid 5080] [evidence ISA]	GB-like; AL033335; Rack1; p205; Gnb2-rs1	GB-like; AL033335; Rack1; p205; Gnb2-rs1
Mus musculus	Riken	ILMN_204293	ILMN_204293	A730048K03RIK	ri|A730048K03|PX00151D09|AK080486|2397					AK080486	A730048K03Rik		ILMN_2563870	003170673	S	2245	CATCCATCAGCTGAATGCCTGTGAAGTCACCAGGTCTTTGTACAGCTTGT										
Mus musculus	RefSeq	ILMN_218464	ILMN_218464	DEGS2	NM_027299.4	NM_027299.4		70059	146141181	NM_027299.4	Degs2	NP_081575.2	ILMN_2696173	001820592	S	797	GGATCACCTTCAATGTGGGTTACCACATGGAACACCACGACTTCCCCAGT				12qF1	Mus musculus degenerative spermatocyte homolog 2 (Drosophila), lipid desaturase (Degs2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor [goid 16705] [evidence IEA]; Catalysis of the hydroxylation of sphingolipid long chain bases [goid 170] [evidence IDA]	AI852933; 2210008A03Rik; DES2	AI852933; 2210008A03Rik; DES2
Mus musculus	RefSeq	ILMN_212337	ILMN_212337	GRB14	NM_016719.1	NM_016719.1		50915	7710031	NM_016719.1	Grb14	NP_057928.1	ILMN_2625280	002810100	S	1512	CGGGATAGTCAGAGTAACCCCAGAACTTTTGTACTGTCAATGAGTCATGG	2	-	64752803-64752852	2qC1.3	Mus musculus growth factor receptor bound protein 14 (Grb14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IPI]	AI505286	AI505286
Mus musculus	RefSeq	ILMN_212337	ILMN_212337	GRB14	NM_016719.1	NM_016719.1		50915	7710031	NM_016719.1	Grb14	NP_057928.1	ILMN_2666181	004730377	S	1240	CCCTAGTAGCAATGGACTTCTCAGGTGAGAAGAGCAGAGTCATAGACAAC	2	-	64755303-64755352	2qC1.3	Mus musculus growth factor receptor bound protein 14 (Grb14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IPI]	AI505286	AI505286
Mus musculus	RefSeq	ILMN_238166	ILMN_238166	SP100	NM_013673.2	NM_013673.2		20684	124249353	NM_013673.2	Sp100	NP_038701.2	ILMN_2846812	001170110	S	2012	GTCAGGTCTGAGCCTACTGAGAAGACCACTCTGGAAGCAGGATTGCCCCC				1qC5	Mus musculus nuclear antigen Sp100 (Sp100), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	A430075G10Rik	A430075G10Rik
Mus musculus	Riken	ILMN_205039	ILMN_205039	NSG2	ri|A630002O18|PX00144G17|AK041338|1975					AK041338	Nsg2		ILMN_2569532	005080286	S	1335	CTCCTCTTCTTGCTCTTGGATACTATAGAGCTTTCCCTTTTGCTTTACCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IEA]	Interacting selectively with a dopamine receptor [goid 50780] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211422	ILMN_211422	EIF3S8	scl056347.10_39				22203754	NM_146200	Eif3s8		ILMN_2615741	000110328	S	1549	CTGCCAGATCTACTTAAGGCGCATCCTGCACACGTACTACAAGTTTGACT										
Mus musculus	Riken	ILMN_206710	ILMN_206710	E530016P20RIK	ri|E530016P20|PX00319C02|AK089150|1228					AK089150	E530016P20Rik		ILMN_1231178	006900482	S	728	TCACCTTTTTTTTTTTTTTAATTCACGGGTTGTTTACTCTTATATGTGAC										
Mus musculus	RefSeq	ILMN_210994	ILMN_210994	CLM3	NM_199201.1	NM_199201.1		382551	40353229	NM_199201.1	Clm3	NP_954671.1	ILMN_3052890	004730746	I	659	GAGGTGAAATTGGCCTGGTGGAAACCCATAGATCTGATGCCCTGGACGGA	11	-	114903474-114903523	11qE2	Mus musculus CMRF-35-like molecule 3 (Clm3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	clm-3; AY457049	clm-3; AY457049
Mus musculus	RefSeq	ILMN_210994	ILMN_210994	CLM3	NM_199201.1	NM_199201.1		382551	40353229	NM_199201.1	Clm3	NP_954671.1	ILMN_1255739	005090605	S	398	CATGACGACGACAGCCACAGTTCTGCCATCCACAGTTCTGACATCCACAG	11	-	114905497-114905546	11qE2	Mus musculus CMRF-35-like molecule 3 (Clm3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	clm-3; AY457049	clm-3; AY457049
Mus musculus	RefSeq	ILMN_210994	ILMN_210994	CLM3	NM_199201.1	NM_199201.1		382551	40353229	NM_199201.1	Clm3	NP_954671.1	ILMN_3129464	005130373	A	291	CCTGAGGATGAGCGATGCTGACATTTACTGGTGTGGAATTACGAAAGCTG	11	-	114907121-114907170	11qE2	Mus musculus CMRF-35-like molecule 3 (Clm3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	clm-3; AY457049	clm-3; AY457049
Mus musculus	RefSeq	ILMN_211952	ILMN_229872	PHLPPL	XM_916673.2	XM_916673.2		244650	94384313	XM_916673.2	Phlppl	XP_921766.1	ILMN_2621095	006380561	S	3801	CAACAGTGGTATACTTCTGCCAGCGAACAGAGACAAGATGGAGCTGCAGA				8qD3	PREDICTED: Mus musculus PH domain and leucine rich repeat protein phosphatase-like, transcript variant 3 (Phlppl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196973	ILMN_196973	LOC217738	XM_138107.3	XM_138107.3			38050495	XM_138107.3	LOC217738		ILMN_2526447	003930619	S	661	AGCGGGGCCATAGACAACTGGGACTATGGCTGGTTGGGTCCTCAGGAACA										
Mus musculus	RefSeq	ILMN_237050	ILMN_237050	EAR4	NM_001017422.1	NM_001017422.1		53877	62945403	NM_001017422.1	Ear4	NP_001017422.1	ILMN_2868480	006250546	S	7	CCGAAGCTGCTTGAGTCCCGACTTTGTCTCCTGCTGCTGTTGGGACTTGT	14	+	50125647-50125696		Mus musculus eosinophil-associated, ribonuclease A family, member 4 (Ear4), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	Rnase2; mR4; RNS2	Rnase2; mR4; RNS2
Mus musculus	MEEBO	ILMN_187484	ILMN_187484	LSS	scl38745.21_30				22122468	NM_146006	Lss		ILMN_2444540	007040112	S	18	TTGAACACTACAAACATTATGCAGCAATGACAAATAAAGTGTGGCACTGC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: (S)-2,3-epoxysqualene = lanosterol. This is a cyclization reaction that forms the sterol nucleus [goid 250] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223258	ILMN_312047	LOC100047934	XM_001478074.1	XM_001478074.1		100047934	149255670	XM_001478074.1	LOC100047934	XP_001478124.1	ILMN_1239397	002140136	S	2238	CTCATCTCATATCCCTGGGCACTCGGTCTAGTGAGCGTTTTGTCATCATG					PREDICTED: Mus musculus hypothetical protein LOC100047934 (LOC100047934), mRNA.					
Mus musculus	RefSeq	ILMN_201400	ILMN_311145	LOC100046278	XM_001476119.1	XM_001476119.1		100046278	149258606	XM_001476119.1	LOC100046278	XP_001476169.1	ILMN_1212867	004490463	S	1	ATGAAGACACTCGTTCTCCTCTCTGCCCTTGTCCTGCTGGCCTTCTATGT					PREDICTED: Mus musculus similar to CRS4C-6 (LOC100046278), mRNA.					
Mus musculus	RefSeq	ILMN_200932	ILMN_200932	LOC381912	XM_358676.1	XM_358676.1			38087144	XM_358676.1	LOC381912		ILMN_1254108	000380201	S	558	AGGGCAGCACCCTGCTTCACCCTTCCGATAGCACTACCACTCAGACTGCT										
Mus musculus	RefSeq	ILMN_191704	ILMN_191704	PDSS1	NM_019501.3	NM_019501.3		56075	90577180	NM_019501.3	Pdss1	NP_062374.2	ILMN_2986605	005220110	S	1251	CTGTGAGAGAGATCAGGAAGCTTAGACCATCTACAGAAAGGGACGCCCTC	2	+	22795395-22795444	2qA3	Mus musculus prenyl (solanesyl) diphosphate synthase, subunit 1 (Pdss1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IDA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated nonidentical subunits [goid 51290] [evidence IPI]; The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Catalysis of the reaction: all-trans-octaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-nonaprenyl diphosphate [goid 50347] [evidence IPI]; Catalysis of the reaction: all-trans-hexaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-heptaprenyl diphosphate [goid 10] [evidence IDA]	mSPS1; Tprt; TPT; mDLP1; 2610203G20Rik; 2700031G06Rik	mSPS1; Tprt; TPT; mDLP1; 2610203G20Rik; 2700031G06Rik
Mus musculus	RefSeq	ILMN_192558	ILMN_192558	ZFP353	NM_153096.2	NM_153096.2		234203	120407055	NM_153096.2	Zfp353	NP_694736.2	ILMN_1237181	000510451	S	3015	ACAAAACAAATATTTAGAATAAGAAACTGTACCATGTGATCTCAGACCCC	8	-	43166669-43166718	8qA4	Mus musculus zinc finger protein 353 (Zfp353), mRNA.					
Mus musculus	RefSeq	ILMN_200493	ILMN_200493	LOC383260	XM_356951.1	XM_356951.1			38082756	XM_356951.1	LOC383260		ILMN_2538964	002900240	S	739	CGCCTAGAGACGCACTACACCCTATGTGAGCCTGTCCTGACCTTTTACCA										
Mus musculus	RefSeq	ILMN_247025	ILMN_247025	CLEC4A4	NM_001005860.1	NM_001005860.1		474145	54312069	NM_001005860.1	Clec4a4	NP_001005860.1	ILMN_3161114	007380102	S	438	CCACAGCCAGGCAGAGCAGGATTTCATCACCAGCAACCTGAACACAAGTG	6	+	122962857-122962875:122963777-122963807	6qF2	Mus musculus C-type lectin domain family 4, member a4 (Clec4a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC129457; MGC129456; Dcir2	MGC129457; MGC129456; Dcir2
Mus musculus	Riken	ILMN_204584	ILMN_204584	C130032M10RIK	ri|C130032M10|PX00168P05|AK048065|729					AK048065	C130032M10Rik		ILMN_1220036	001690156	S	377	ACAGGGTCACCGGCGTGGCTGCGTTTGTGTGGAATACTGGGAATGACGGT										
Mus musculus	RefSeq	ILMN_186208	ILMN_186208	TRP53BP1	NM_013735.2	NM_013735.2		27223	34852026	NM_013735.2	Trp53bp1	NP_038763.2	ILMN_2433547	006520687	S	5802	GTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGCAGCATCC	2	-	121024207-121024256	2qE5	Mus musculus transformation related protein 53 binding protein 1 (Trp53bp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]; Interacting selectively with damaged DNA [goid 3684] [evidence IDA]	m53BP1; MGC100303; 53BP1	m53BP1; MGC100303; 53BP1
Mus musculus	RefSeq	ILMN_186208	ILMN_186208	TRP53BP1	NM_013735.2	NM_013735.2		27223	34852026	NM_013735.2	Trp53bp1	NP_038763.2	ILMN_1243753	005270731	S	5477	CCAACTTCAAAACTATCGTAATTATCTGCTGCCTGCTGGGTATAGCCTTG	2	-	121025385-121025434	2qE5	Mus musculus transformation related protein 53 binding protein 1 (Trp53bp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]; Interacting selectively with damaged DNA [goid 3684] [evidence IDA]	m53BP1; MGC100303; 53BP1	m53BP1; MGC100303; 53BP1
Mus musculus	RefSeq	ILMN_213930	ILMN_213930	GAS1	NM_008086.1	NM_008086.1		14451	6679940	NM_008086.1	Gas1	NP_032112.1	ILMN_2642397	000830170	S	2910	TTTTGGTTGTTTTATTAAAAATGCACACACCAGTAAAGAGTTTAAACAGT	13	-	60275767-60275816	13qB2	Mus musculus growth arrest specific 1 (Gas1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence ISS]	The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48592] [evidence IMP]; The process by which the anatomical structure of the cerebellum is generated and organized. Morphogenesis pertains to the creation of form. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21587] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IGI]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IGI]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the anatomical structures of the outer ear are generated and organized. Morphogenesis pertains to the creation of form. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull [goid 42473] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of S phase of mitotic cell cycle activity [goid 45749] [evidence NAS]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; Cell death resulting from activation of endogenous cellular processes [goid 12501] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [evidence ISO]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IDA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gas-1; AW554192	Gas-1; AW554192
Mus musculus	RefSeq	ILMN_216733	ILMN_216733	SPAG5	NM_017407.1	NM_017407.1		54141	33859673	NM_017407.1	Spag5	NP_059103.1	ILMN_2674614	004200044	S	1405	CTTCAGGACAGCAAGGAGATTAGACAGGCTCTACTGCAAGCCAGGAATGT	11	+	78117556-78117605	11qB5	Mus musculus sperm associated antigen 5 (Spag5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence ISA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence ISA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISA]	Mastrin; AI874642; S17; MAP126; Deepest; D11Bhm180e	Mastrin; AI874642; S17; MAP126; Deepest; D11Bhm180e
Mus musculus	RefSeq	ILMN_216733	ILMN_216733	SPAG5	NM_017407.1	NM_017407.1		54141	33859673	NM_017407.1	Spag5	NP_059103.1	ILMN_2744217	002190064	S	3704	CCCAACCCTTATCCCAATAATAAGACCAATTGGCATAGAGCCGACCATGT	11	+	78127683-78127732	11qB5	Mus musculus sperm associated antigen 5 (Spag5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence ISA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence ISA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISA]	Mastrin; AI874642; S17; MAP126; Deepest; D11Bhm180e	Mastrin; AI874642; S17; MAP126; Deepest; D11Bhm180e
Mus musculus	RefSeq	ILMN_216733	ILMN_216733	SPAG5	NM_017407.1	NM_017407.1		54141	33859673	NM_017407.1	Spag5	NP_059103.1	ILMN_1226991	007100288	S	1399	AACATCTTCAGGACAGCAAGGAGATTAGACAGGCTCTACTGCAAGCCAGG	11	+	78117550-78117599	11qB5	Mus musculus sperm associated antigen 5 (Spag5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence ISA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence ISA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISA]	Mastrin; AI874642; S17; MAP126; Deepest; D11Bhm180e	Mastrin; AI874642; S17; MAP126; Deepest; D11Bhm180e
Mus musculus	RefSeq	ILMN_217461	ILMN_217461	CAR9	NM_139305.1	NM_139305.1		230099	21314849	NM_139305.1	Car9	NP_647466.1	ILMN_2874084	003450220	S	1890	CCCAGCCTCTTGAATGCTGGGATTACAGGAATGCACCATCATGCTTGGTC	4	+	43534737-43534786	4qB1	Mus musculus carbonic anhydrase 9 (Car9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; The regulated release of a substance by a cell, a group of cells, or a tissue [goid 46903] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	CAIX; MN/CA9	CAIX; MN/CA9
Mus musculus	RefSeq	ILMN_224157	ILMN_312301	LOC100043919	XM_001481238.1	XM_001481238.1		100043919	149275223	XM_001481238.1	LOC100043919	XP_001481288.1	ILMN_2775767	003370634	S	444	GCACCCCCACCGCTGCTGCACAGACAGCCGGTGCATTAAAGAGTTAAAGT	Un|NT_166434.1	+	61749-61798		PREDICTED: Mus musculus hypothetical protein LOC100043919 (LOC100043919), mRNA.					
Mus musculus	MEEBO	ILMN_191324	ILMN_191324	A130004G07RIK	scl18900.1_373				31343117	NM_177228	A130004G07Rik		ILMN_2478143	003780561	S	15	GAGGAAGAAATAAACAGCTCCTTAGCAAAAAGAAACCAGCCAATCCCTCC										
Mus musculus	MEEBO	ILMN_191324	ILMN_191324	A130004G07RIK	scl18900.1_373				31343117	NM_177228	A130004G07Rik		ILMN_2607905	002940184	S	3944	CCAGCCTAATAGTGACAGTAGTAATATATTAGAAAAGGAAGCCCCAGCCC										
Mus musculus	MEEBO	ILMN_213238	ILMN_213238	LRIG2	scl0269473.1_27	XM_194114.3			38076935	XM_194114.3	Lrig2		ILMN_1212838	000990735	S	3886	TCTGTATAACTGGGGATGTCATTGTAAATATATGTGCATTCATAAATAAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197884	ILMN_197884	LOC329892	XM_287356.1	XM_287356.1			28497869	XM_287356.1	LOC329892		ILMN_1247799	006420326	S	576	GTGTGCAGCAAAGCCACCAGCCTCTTTTAGCCTACCAGCCCACTTCCCTG										
Mus musculus	RefSeq	ILMN_186258	ILMN_316763	LOC100048346	XM_001480051.1	XM_001480051.1		100048346	149255743	XM_001480051.1	LOC100048346	XP_001480101.1	ILMN_2433990	002490452	S	895	GCCTACATCCGGAATCCCGTGGATGGAAAGTGGTTCTGCTTCAATGACTC					PREDICTED: Mus musculus similar to ubiquitin specific protease UBP43 (LOC100048346), mRNA.					
Mus musculus	RefSeq	ILMN_222948	ILMN_222948	CRYGB	NM_144761.1	NM_144761.1		12965	42733605	NM_144761.1	Crygb	NP_658906.1	ILMN_2757133	007160608	S	519	GCGAGTCATGGATTTTTACTGAGGCATTTTGAGACTCTACTTTCCTCCTC	1	-	65126837-65126865:65126866-65126886	1qC2	Mus musculus crystallin, gamma B (Crygb), mRNA.		The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]	Cryg-3; DGcry-3; Nop	Cryg-3; DGcry-3; Nop
Mus musculus	MEEBO	ILMN_212951	ILMN_212951	ETV1	scl014009.13_0	NM_007960.1			6679700	NM_007960.1	Etv1		ILMN_2649709	006900646	S	83	TTGCAGCCGTTCGCCTAGCGTGGCCTTCAGGTTGATAGAAGTCCAGATCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Behavior that is dependent upon the sensation of a mechanical stimulus [goid 7638] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	Riken	ILMN_205161	ILMN_205161	OX2R, GPCR	ri|A630036A01|PX00145M23|AK041766|901					AK041766	OX2R, GPCR		ILMN_1218512	004200424	S	328	CGGGGCAGGACCGCTTCAAAACTGGTAGAATATTTATTGCTATGATGAGG										
Mus musculus	RefSeq	ILMN_190622	ILMN_248751	TAF13	NM_025444.2	NM_025444.2		99730	141802143	NM_025444.2	Taf13	NP_079720.1	ILMN_2728830	006100433	S	1040	ACGGAGAGTTGATTAAATCTGTATGTGGCTGTGCAAACCATTTTCGCGGT	3	+	108384737-108384786	3qF3	Mus musculus TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf13), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	TAFII18; AI847295; 2010309N11Rik; 1810004N01Rik	TAFII18; AI847295; 2010309N11Rik; 1810004N01Rik
Mus musculus	RefSeq	ILMN_187499	ILMN_259831	EML4	NM_199466.2	NM_199466.2		78798	83921565	NM_199466.2	Eml4	NP_955760.2	ILMN_1253677	000780768	S	4773	GGGTGGTAGTTCCAAAGACACTACTAATGTGCAGAGAGCGCTCCGGCCTC	17	+	83879416-83879465	17qE4	Mus musculus echinoderm microtubule associated protein like 4 (Eml4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930443C24Rik; AI644019; MGC90779	4930443C24Rik; AI644019; MGC90779
Mus musculus	RefSeq	ILMN_198355	ILMN_331487	LOC100039458	XM_001472920.1	XM_001472920.1		100039458	149270206	XM_001472920.1	LOC100039458	XP_001472970.1	ILMN_1247525	001940470	S	312	CCACCCTGTGACTGTGACCTCAACACTGGATCTCACCCACCCTGTCACTG	18	-	81895866-81895915	18qE3	PREDICTED: Mus musculus similar to mucin (LOC100039458), mRNA.					
Mus musculus	RefSeq	ILMN_212336	ILMN_248047	PACRG	NM_027032.2	NM_027032.2		69310	117676372	NM_027032.2	Pacrg	NP_081308.1	ILMN_2625279	004150424	S	1075	CCTTGGTGTCACAGCCGTCTGTCCCTAAAGTCCTAGCATCTCATTACTTG	17	-	10596108-10596157	17qA1	Mus musculus Park2 co-regulated (Pacrg), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700008H23Rik	1700008H23Rik
Mus musculus	RefSeq	ILMN_201506	ILMN_201506	LOC385274	XM_358163.1	XM_358163.1			38095518	XM_358163.1	LOC385274		ILMN_1251145	005130386	S	445	GCTGATGCTGAGCCAGATTCTTCCACCTGTGCTGCTGTCAATGGGGCCTA										
Mus musculus	RefSeq	ILMN_214121	ILMN_214121	MFSD3	NM_027122.3	NM_027122.3		69572	142387831	NM_027122.3	Mfsd3	NP_081398.2	ILMN_2742136	001190091	S	1433	CAGGAAATGCAGCTCTCCTCAAACTGAAGGCTATGTTACCAGAAAGCACA	15	+	76528601-76528650	15qD3	Mus musculus major facilitator superfamily domain containing 3 (Mfsd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	2310010G13Rik	2310010G13Rik
Mus musculus	RefSeq	ILMN_214121	ILMN_214121	MFSD3	NM_027122.3	NM_027122.3		69572	142387831	NM_027122.3	Mfsd3	NP_081398.2	ILMN_2644480	004540441	S	862	TTCTGCCTCAGACTTGGGGCTATGGAGTGGCTTGGGTGCTGTGACCTGCT	15	+	76527794-76527843	15qD3	Mus musculus major facilitator superfamily domain containing 3 (Mfsd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	2310010G13Rik	2310010G13Rik
Mus musculus	RefSeq	ILMN_214319	ILMN_214319	DDX28	NM_028038.2	NM_028038.2		71986	142369283	NM_028038.2	Ddx28	NP_082314.1	ILMN_1259277	004060577	S	1377	CGCCTCCCGAGGCCTAGACAGTGTCCACGTGGAAGTGGTTATCAATTACG	8	-	108533907-108533956	8qD3	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 (Ddx28), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	Mddx28; AI449652; 2410004K13Rik	Mddx28; AI449652; 2410004K13Rik
Mus musculus	RefSeq	ILMN_196844	ILMN_196844	LOC239972	XM_139665.1	XM_139665.1			20897036	XM_139665.1	LOC239972		ILMN_1226756	000070228	S	1274	CTTCGGGGTCCACACTGGAGGGCAAACATCAGGCAGGAGAGAACTGCTCA										
Mus musculus	Riken	ILMN_205908	ILMN_205908	ABCA8	ri|A830027H05|PX00154E24|AK043744|1727					AK043744	Abca8		ILMN_1258627	006020402	S	1607	CTGCAATGAGAACTCTGCCAGTCTCCCACGTGTCACCAGTTAATTGCCTC										
Mus musculus	MEEBO	ILMN_215261	ILMN_215261	A130050O07RIK	scl17408.1.919_229	NM_177080.2			31342751	NM_177080.2	A130050O07Rik		ILMN_2657316	001440646	S	1936	CCAAAAGACACTGAAAGCAGACTATCCAGGAAAAGGACAGGCTATGAGGT										
Mus musculus	RefSeq	ILMN_187910	ILMN_233309	DPH5	NM_027193.2	NM_027193.2		69740	40254182	NM_027193.2	Dph5	NP_081469.2	ILMN_1243462	002190707	S	1213	GGAGGTGGAGACCAAGAATAACGTGAGGAAACTGGACAATGAATCACTTG	3	+	115631887-115631936	3qG1	Mus musculus DPH5 homolog (S. cerevisiae) (Dph5), mRNA.		The posttranslational modification of peptidyl-histidine to 2'-(3-carboxamido-3-(trimethylammonio)propyl)-L-histidine, known as diphthamide, found in translation elongation factor eEF-2 [goid 17183] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + 2-(3-carboxy-3-aminopropyl)-L-histidine = S-adenosyl-L-homocysteine + 2-(3-carboxy-3-(methylammonio)propyl)-L-histidine [goid 4164] [evidence IEA]	2410012M04Rik; AU045680; C80186	2410012M04Rik; AU045680; C80186
Mus musculus	RefSeq	ILMN_219622	ILMN_219622	FCGR1	NM_010186.4	NM_010186.4		14129	146149113	NM_010186.4	Fcgr1	NP_034316.1	ILMN_1229523	004220603	S	2315	GGCATGAGAGGGACCGGGATAATGGACCACAGTCACAGGAGGAGATACAC				3qF2.1	Mus musculus Fc receptor, IgG, high affinity I (Fcgr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 42590] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IMP]; Cytolysis of target cells by natural killer cells, eosinophils, neutrophils, monocytes, or macrophages following engagement of antibodies bound to the target cells by Fc receptors on the effector cells [goid 1788] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of type IIa hypersensitivity, a type of inflammatory response [goid 1798] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of type III hypersensitivity, a type of inflammatory response [goid 1805] [evidence IMP]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence IMP]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) of exogenous origin on its cell surface in association with an MHC protein complex [goid 19884] [evidence IMP]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an immunoglobulin of an IgG isotype via the Fc region to initiate a change in cell activity [goid 19770] [evidence IMP]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IDA]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IMP]	IGGHAFC; FcgammaRI; AV092959; AI323638; CD64	IGGHAFC; FcgammaRI; AV092959; AI323638; CD64
Mus musculus	RefSeq	ILMN_213887	ILMN_211483	FXYD2	NM_052823.2	NM_052823.2		11936	122937379	NM_052823.2	Fxyd2	NP_439888.1	ILMN_1251018	006650754	S	517	TTCTCTAACACCCCACTCCCTGTTCCAAGTTGAGGAGCATGTGTAGCCTC	9	+	45218246-45218295	9qA5.2	Mus musculus FXYD domain-containing ion transport regulator 2 (Fxyd2), transcript variant b, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Atp1g1	Atp1g1
Mus musculus	RefSeq	ILMN_211483	ILMN_211483	FXYD2	NM_052823.2	NM_052823.2		11936	122937379	NM_052823.2	Fxyd2	NP_439888.1	ILMN_2616328	003890689	S	104	CTGGCTCCTGCGTACCTCAGACACCTCCAGCAGCTCCTACCATGGACAGG	9	+	45211324-45211364:45211365-45211373	9qA5.2	Mus musculus FXYD domain-containing ion transport regulator 2 (Fxyd2), transcript variant b, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	Atp1g1	Atp1g1
Mus musculus	RefSeq	ILMN_210176	ILMN_210176	BC057170	NM_172777.2	NM_172777.2		236573	118129953	NM_172777.2	BC057170	NP_766365.1	ILMN_2603001	000650484	S	377	CCTGGACACCGAGGGCCTGGGGGATGTGGAAAAGAGTAATCCTAAAAACG	5	-	105523562-105523578:105532788-105532820	5qE5	Mus musculus cDNA sequence BC057170 (BC057170), mRNA.				Gbp6; E430029F06	Gbp6; E430029F06
Mus musculus	RefSeq	ILMN_210176	ILMN_210176	BC057170	NM_172777.2	NM_172777.2		236573	118129953	NM_172777.2	BC057170	NP_766365.1	ILMN_2641863	001400259	S	2641	CAAATAACAGTCAAGCTATCTGTATAATGATCTAAATTGAGCTAAAATAT	5	-	105508341-105508390	5qE5	Mus musculus cDNA sequence BC057170 (BC057170), mRNA.				Gbp6; E430029F06	Gbp6; E430029F06
Mus musculus	RefSeq	ILMN_223615	ILMN_223615	LOH12CR1	NM_026371.2	NM_026371.2		67774	27754072	NM_026371.2	Loh12cr1	NP_080647.2	ILMN_2876124	003780603	S	1518	GACGCAATAAGTGCAGGGGACGGGCCTGAAGATAAGAGCTGGGTCTGAGG	6	+	134661000-134661049	6qG1	Mus musculus loss of heterozygosity, 12, chromosomal region 1 homolog (human) (Loh12cr1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5830457J20Rik; AW124643	5830457J20Rik; AW124643
Mus musculus	RefSeq	ILMN_223615	ILMN_223615	LOH12CR1	NM_026371.2	NM_026371.2		67774	27754072	NM_026371.2	Loh12cr1	NP_080647.2	ILMN_1218940	007330019	S	1145	GCTATGCATTGGCCCCCATCACATCAAGGAGGTATCTGGCACTGTCTTCC	6	+	134660627-134660676	6qG1	Mus musculus loss of heterozygosity, 12, chromosomal region 1 homolog (human) (Loh12cr1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5830457J20Rik; AW124643	5830457J20Rik; AW124643
Mus musculus	RefSeq	ILMN_190598	ILMN_247002	TYW3	NM_172474.3	NM_172474.3		209584	146149084	NM_172474.3	Tyw3	NP_766062.1	ILMN_2759004	006770121	S	1531	CGCACTTGAGGGATGACTGGATCAGATAGGAAGTGAGCATTGGCCAGCAA				3qH4	Mus musculus tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) (Tyw3), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	5230400J09Rik	5230400J09Rik
Mus musculus	RefSeq	ILMN_195457	ILMN_254870	FOXK2	NM_001080932.1	NM_001080932.1		68837	124286859	NM_001080932.1	Foxk2	NP_001074401.1	ILMN_1249752	005050661	S	3263	CACGCACGTACCTGCTCTAGCTTGCTGGGTTTGTTGTTTGTTTCTTTATG	11	+	121169111-121169160	11qE2	Mus musculus forkhead box K2 (Foxk2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	1110054H05Rik; 6230415M23Rik; 5730434B08Rik	1110054H05Rik; 6230415M23Rik; 5730434B08Rik
Mus musculus	RefSeq	ILMN_184512	ILMN_184512	TRP53BP2	NM_173378.2	NM_173378.2		209456	112799850	NM_173378.2	Trp53bp2	NP_775554.2	ILMN_2419247	004830347	S	3787	AAATGAAGGACCGAAGGACTCGGCGTGAGCAGAGGCATTGCTGCTGAGCC	1	+	184391984-184392033	1qH5	Mus musculus transformation related protein 53 binding protein 2 (Trp53bp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	X98550; AI746547; 53BP2; ASPP2; Tp53bp2; PPP1R13A	X98550; AI746547; 53BP2; ASPP2; Tp53bp2; PPP1R13A
Mus musculus	RefSeq	ILMN_227980	ILMN_227980	OTTMUSG00000000712	NM_001076790.1	NM_001076790.1		238568	115647929	NM_001076790.1	OTTMUSG00000000712	NP_001070258.1	ILMN_2960483	000110451	S	1248	GATGATGGGTGCATCACCAACTACCCACACTTTCTGTGCTGACCACCCCT	13	+	33763233-33763282	13qA3.3	Mus musculus predicted gene, OTTMUSG00000000712 (OTTMUSG00000000712), mRNA. XM_972747			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196229	ILMN_329137	LOC626061	XR_034929.1	XR_034929.1		626061	149251455	XR_034929.1	LOC626061		ILMN_2522759	001030446	S	1500	CCTTCTTTTGAAGCCTGTCTGTCTGTCTTTCTGGAGGACAGTATCTAGCA	3	+	115644954-115645003	3qG1	PREDICTED: Mus musculus similar to E74-like factor 1 (LOC626061), misc RNA.					
Mus musculus	RefSeq	ILMN_197632	ILMN_329137	LOC626061	XR_034929.1	XR_034929.1		626061	149251455	XR_034929.1	LOC626061		ILMN_1252924	000510097	S	3628	CCTACCCAGCTCTTCCGGACTGTTCAAGCTGTCCCAGAAGAGGCAACCAT	3	+	115647082-115647131	3qG1	PREDICTED: Mus musculus similar to E74-like factor 1 (LOC626061), misc RNA.					
Mus musculus	Riken	ILMN_202053	ILMN_202053	HBB-B1	ri|2510023M22|ZX00060I04|AK010993|627					AK010993	Hbb-b1		ILMN_1244316	001300440	S	401	CACCACCTGGGCAAGGATTTCACCCCCGCTGCACAGGCTGCCTTCCAAAA						An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IMP]		
Mus musculus	RefSeq	ILMN_201121	ILMN_201121	LOC384834	XM_357887.1	XM_357887.1			38089290	XM_357887.1	LOC384834		ILMN_2541164	001500619	S	260	CAGCAATGAGGGTGCCAAGGCCCTCACAAAGACAGTACCTAGACAAGCAA										
Mus musculus	RefSeq	ILMN_192195	ILMN_192195	TSPAN5	NM_019571.3	NM_019571.3		56224	146134383	NM_019571.3	Tspan5	NP_062517.1	ILMN_2485874	004590685	S	3121	CTCGAGAGTGATTGTAATAAAAGCTGTCATTAATAAACTCGGTTCTACCT				3qH1	Mus musculus tetraspanin 5 (Tspan5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Tm4sf9; AU024142; NET-4; 4930505M03Rik; 2810455A09Rik	Tm4sf9; AU024142; NET-4; 4930505M03Rik; 2810455A09Rik
Mus musculus	RefSeq	ILMN_221941	ILMN_221941	HPS3	NM_080634.2	NM_080634.2		12807	31560000	NM_080634.2	Hps3	NP_542365.2	ILMN_2994287	000620041	S	3633	CGGACTCTTGTCTGGCTGTTAACATGACTTGTTTACACATATTTTCAGCC	3	-	20188394-20188443	3qA2	Mus musculus Hermansky-Pudlak syndrome 3 homolog (human) (Hps3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]		coa	coa
Mus musculus	RefSeq	ILMN_190631	ILMN_321953	LOC100047191	XM_001477913.1	XM_001477913.1		100047191	149270058	XM_001477913.1	LOC100047191	XP_001477963.1	ILMN_1260376	001850575	S	348	CTTAAAGTATGTTCCGGTTTTTACTCAACCCGGGCTTGGCGCCTCACGCC					PREDICTED: Mus musculus hypothetical protein LOC100047191 (LOC100047191), mRNA.					
Mus musculus	RefSeq	ILMN_229981	ILMN_229981	1700042B14RIK	NM_001081671.1	NM_001081671.1		73347	126157452	NM_001081671.1	1700042B14Rik	NP_001075140.1	ILMN_2967254	004920221	S	542	TATGGGAAGAGTACGGAGGAATGCCACCTGCAATCCTTTCAGACTTTCAG	X	-	151559988-151560037	XqF3	Mus musculus RIKEN cDNA 1700042B14 gene (1700042B14Rik), mRNA.				RP23-440J5.4; MGC117726	RP23-440J5.4; MGC117726
Mus musculus	Riken	ILMN_207301	ILMN_207301	4632427K15RIK	ri|4632427K15|PX00637M24|AK076297|4588					AK076297	4632427K15Rik		ILMN_1214219	002140053	S	4416	CCAAGAGGAGAAATGGGCCTTGCAGAAACAGAGGCAGGATGACTGTAGCC										
Mus musculus	RefSeq	ILMN_192147	ILMN_239826	SERPINB6A	NM_009254.2	NM_009254.2		20719	31982000	NM_009254.2	Serpinb6a	NP_033280.1	ILMN_1250279	005960477	S	1276	GGTGAGGTGCATGAGATTCACTCCCCGCTTCTGTGCCGACCACCCCTTCC	13	-	34009974-34010023	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 6a (Serpinb6a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	ovalbumin; AI876477; Serpinb6; Spi3	ovalbumin; AI876477; Serpinb6; Spi3
Mus musculus	RefSeq	ILMN_221012	ILMN_221012	TMEM202	NM_178388.2	NM_178388.2		73893	31341615	NM_178388.2	Tmem202	NP_848475.1	ILMN_1224223	004900612	S	959	CTTCGATGAAACCTTCTGATATCATGTCTGTAATAGCAGGAAACCTAACG	9	-	59366739-59366788	9qB	Mus musculus transmembrane protein 202 (Tmem202), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_205725	ILMN_205725	9830141K10RIK	ri|9830141K10|PX00118N03|AK036615|3223					AK036615	9830141K10Rik		ILMN_2574754	006250717	S	3030	CTCTTAGGTCTTTCGCACCTTCCCTTCCATATGGATCCACATCTTGTGAT										
Mus musculus	RefSeq	ILMN_219566	ILMN_219566	FAM20A	NM_153782.1	NM_153782.1		208659	24418882	NM_153782.1	Fam20a	NP_722477.1	ILMN_1218877	003780411	S	1771	CCGACACCATTATGAGATGTTCACCAAATTTGGGGATGATGGATACCTTA	11	-	109536441-109536490	11qE1	Mus musculus family with sequence similarity 20, member A (Fam20a), mRNA.				AI606893; Fam20a	AI606893; Fam20a
Mus musculus	RefSeq	ILMN_219566	ILMN_219566	FAM20A	NM_153782.1	NM_153782.1		208659	24418882	NM_153782.1	Fam20a	NP_722477.1	ILMN_2840430	004810228	S	2399	GAGCTCTGGCTCCATCAGGACTGCAGATTATCTTCTGAGCACACTGTGAA	11	-	109534332-109534381	11qE1	Mus musculus family with sequence similarity 20, member A (Fam20a), mRNA.				AI606893; Fam20a	AI606893; Fam20a
Mus musculus	Riken	ILMN_207070	ILMN_207070	9230113A21RIK	ri|9230113A21|PX00651L02|AK079029|2002					AK079029	9230113A21Rik		ILMN_2584814	003140523	S	1544	GGCCACATCTGTCTTGAATGCTCACACACCTTCATTGGTTGACACAGCAG										
Mus musculus	MEEBO	ILMN_184200	ILMN_184200	TTN	scl19105.6_353	XM_130312.3			38074769	XM_130312.3	Ttn		ILMN_2416670	001780598	S	14	CCTGGCCATCCCCTCGTCTAACCAAGCTATGCAAGTATTCCTATGCCAGA						A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_248961	ILMN_248961	LYPD5	NM_029806.1	NM_029806.1		76942	118150403	NM_029806.1	Lypd5	NP_084082.1	ILMN_2798029	000610243	S	776	TCGGGTTCCCTGCATAGACAGCACCTCCAGGATCGCTCCGCAACTCATCA	7	+	25138693-25138709:25138710-25138742	7qA3	Mus musculus Ly6/Plaur domain containing 5 (Lypd5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			2210003I03Rik; MGC141070	2210003I03Rik; MGC141070
Mus musculus	RefSeq	ILMN_221736	ILMN_221736	ADAM2	NM_009618.2	NM_009618.2		11495	116089326	NM_009618.2	Adam2	NP_033748.2	ILMN_2739679	002140475	S	2402	AAATGATTTACTTGTAAGAAATGAATGATTATGAATTTCATATTATACTT	14	-	66646265-66646314	14qD1	Mus musculus a disintegrin and metallopeptidase domain 2 (Adam2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ftnb; AI323749; Ph30-beta	Ftnb; AI323749; Ph30-beta
Mus musculus	MEEBO	ILMN_187817	ILMN_187817	ABCD3	scl21582.24_10				6680611	NM_008991	Abcd3		ILMN_2653696	002750064	S	1829	CAGCCACTGTCGGAAGGTTGGCATCACCCTCTTTACCGTTTCTCACACGA						A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221972	ILMN_221972	MCM5	NM_008566.2	NM_008566.2		17218	112293272	NM_008566.2	Mcm5	NP_032592.2	ILMN_2742849	006220270	S	2509	CCTGTCATGCCTTCTCAACAAGATGAGTCTGGAGCAGGAACAGGCCCTGG	8	+	77651425-77651474	8qC1	Mus musculus minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae) (Mcm5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AA617332; mCD46; AL033333; P1-CDC46; mCDC46; Cdc46; AI324988; Mcmd5	AA617332; mCD46; AL033333; P1-CDC46; mCDC46; Cdc46; AI324988; Mcmd5
Mus musculus	RefSeq	ILMN_196922	ILMN_196922	LOC241073	XM_136661.3	XM_136661.3			38049594	XM_136661.3	LOC241073		ILMN_2526268	000010100	S	2214	CTTGAAGGAGCATGGAGGAGGACTCCCAGCACTGCGGATCGGCTTGGTTA										
Mus musculus	RefSeq	ILMN_219910	ILMN_219910	DHX15	NM_007839.2	NM_007839.2		13204	110835722	NM_007839.2	Dhx15	NP_031865.2	ILMN_1218571	004670768	S	2924	TGTTACAACTTGTGCTTCTGTAGACACAATCTTCTGTCTCCATACAGAGG	5	-	52541483-52541532	5qC1	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 15 (Dhx15), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC117685; mDEAH9; HRH2; DBP1; Ddx15	MGC117685; mDEAH9; HRH2; DBP1; Ddx15
Mus musculus	Riken	ILMN_204420	ILMN_204420	ARAF	ri|A230089M10|PX00129P15|AK039044|1522					AK039044	Araf		ILMN_2564840	006960093	S	2	AAGCCCAAGATGGAGGCGGTGGTGGTGGTAGCGGTGTGACAGGAGGCCTA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA];  [goid 5057] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_195888	ILMN_248898	TRIOBP	NM_001039156.1	NM_001039156.1		110253	88501748	NM_001039156.1	Triobp	NP_001034245.1	ILMN_2519677	007210196	S	7269	GACACTTCTCTTCTGTTCCGTGAGTCACCCTAACTTAATAAAACCTTCCG	15	+	78836241-78836290	15qE1	Mus musculus TRIO and F-actin binding protein (Triobp), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	EST478828; AI428493; Tara; mKIAA1662	EST478828; AI428493; Tara; mKIAA1662
Mus musculus	RefSeq	ILMN_198491	ILMN_198491	LOC381244	XM_355186.1	XM_355186.1			38085807	XM_355186.1	LOC381244		ILMN_2531881	003990671	S	16	GCACAGGGTGCAGTCAATCTCTCGGGGAGTAAGTTTTCTACAGCAAAGAG										
Mus musculus	RefSeq	ILMN_196658	ILMN_253022	ZFP664	NM_001081750.1	NM_001081750.1		269704	126723512	NM_001081750.1	Zfp664	NP_001075219.1	ILMN_2657340	001740156	S	3523	CACCATGCCTTTTAGTGGAGACCTGCAGGCAAGCCTTTGGCCCACTGATC	5	+	125368445-125368494	5qF	Mus musculus zinc finger protein 664 (Zfp664), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AW060232; D930038J03Rik; ZFOC1	AW060232; D930038J03Rik; ZFOC1
Mus musculus	RefSeq	ILMN_194505	ILMN_253022	ZFP664	NM_001081750.1	NM_001081750.1		269704	126723512	NM_001081750.1	Zfp664	NP_001075219.1	ILMN_2507018	002510661	S	127	ACGCGCTCCTCGGCCACGCTCGGGAGGGAGTTGGAGCGGCCGACCGGAGT	5	+	125343201-125343250	5qF	Mus musculus zinc finger protein 664 (Zfp664), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AW060232; D930038J03Rik; ZFOC1	AW060232; D930038J03Rik; ZFOC1
Mus musculus	MEEBO	ILMN_208795	ILMN_208795	4930584N22RIK	scl23948.4_56	NM_026654.1			21311838	NM_026654.1	4930584N22Rik		ILMN_1217396	004780577	S	858	TCCATCTAGCATGAGCGGGCACATTGACTACCGCTGCTGTATGTCCCCTG										
Mus musculus	RefSeq	ILMN_193897	ILMN_246596	D430041D05RIK	NM_001033347.2	NM_001033347.2		241589	124358960	NM_001033347.2	D430041D05Rik	NP_001028519.2	ILMN_2501455	002940735	S	6988	TTTGCAAGGAGGAAGCCAAACTCCAGACAAGTGGAGGGTGGAGCCCCAGC	2	-	103986316-103986365	2qE2	Mus musculus RIKEN cDNA D430041D05 gene (D430041D05Rik), mRNA.				G2; 9630056G07Rik	G2; 9630056G07Rik
Mus musculus	RefSeq	ILMN_196633	ILMN_246596	D430041D05RIK	NM_001033347.2	NM_001033347.2		241589	124358960	NM_001033347.2	D430041D05Rik	NP_001028519.2	ILMN_1234424	004060600	S	6032	GTCTCTTGTGGGGATGATGTTAGGTAGCGAGCGCCCTTTTAGTATGCTGG	2	-	103987272-103987321	2qE2	Mus musculus RIKEN cDNA D430041D05 gene (D430041D05Rik), mRNA.				G2; 9630056G07Rik	G2; 9630056G07Rik
Mus musculus	Riken	ILMN_203507	ILMN_203507	4831426I01RIK	ri|4831426I01|PX00102E01|AK029215|4483					AK029215	4831426I01Rik		ILMN_1233503	006040100	S	4160	GCATGTTTTCCCCCACCTCAGGCTGTCATATGCTTATTTCCCAGGAGGGA										
Mus musculus	RefSeq	ILMN_213638	ILMN_213638	KCNMB4	NM_021452.1	NM_021452.1		58802	10946833	NM_021452.1	Kcnmb4	NP_067427.1	ILMN_3101339	001260424	A	583	CCAAGAGCCTGGCGGTCAAGGCGGAAGCCATGAAGAAACGCAAGTTCTCT	10	-	115855296-115855345	10qD2	Mus musculus potassium large conductance calcium-activated channel, subfamily M, beta member 4 (Kcnmb4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IGI]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IGI]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence ISS]	MGC143660; 2900045G12Rik; 1700058G18Rik	MGC143660; 2900045G12Rik; 1700058G18Rik
Mus musculus	RefSeq	ILMN_213638	ILMN_213638	KCNMB4	NM_021452.1	NM_021452.1		58802	10946833	NM_021452.1	Kcnmb4	NP_067427.1	ILMN_3028187	004180491	I	262	TGTACGTGAACAACTCCGAGTCCAACTCCAGGGCGCTGCTACACAGCGAC	10	-	115910268-115910317	10qD2	Mus musculus potassium large conductance calcium-activated channel, subfamily M, beta member 4 (Kcnmb4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IGI]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IGI]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence ISS]	MGC143660; 2900045G12Rik; 1700058G18Rik	MGC143660; 2900045G12Rik; 1700058G18Rik
Mus musculus	MEEBO	ILMN_209293	ILMN_209293	PEX5	scl0001235.1_220	NM_175933.1			28565270	NM_175933.1	Pex5		ILMN_1226978	005810132	S	2191	GACATAGGGGAGTTGTCATCTGCCGTTTCTGATAGGGTCTGCCACATTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IMP]; The process of directing proteins towards the peroxisome using signals contained within the protein [goid 6625] [evidence TAS]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IMP]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex [goid 21895] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]	Interacting selectively with a peroxisomal targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome [goid 268] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_189931	ILMN_189931	ZFP59	scl0022717.2_329	NM_011762.2			18491006	NM_011762.2	Zfp59		ILMN_2519091	002360097	S	10	CCCCTCACACATACAAACAGTGACACCACACACATGAAAAATGGAGAAAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189931	ILMN_189931	ZFP59	scl0022717.2_329	NM_011762.2			18491006	NM_011762.2	Zfp59		ILMN_1252197	004150671	S	13	GGGAATGAACAGCATGGAATCAATAAGTGTCATTGTCACAGGTCATCCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	Riken	ILMN_205081	ILMN_205081	D430042O09RIK	ri|D430042O09|PX00195H12|AK052528|3738					AK052528	D430042O09Rik		ILMN_1218570	006290131	S	3487	CACCCACACCTGCCCAGTTTGACTGCTCCATCACCTACTTGACCAACGCC										
Mus musculus	Riken	ILMN_203076	ILMN_203076	GSTT2	ri|A430050I24|PX00136A16|AK079739|890					AK079739	Gstt2		ILMN_2554549	006650184	S	759	TGGCCCCGGAGACCAATGAAAGGGTCAGGGCTCACAGACTGTTTGGTTCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence ISO]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence ISO]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198699	ILMN_253669	LOC667383	XM_990244.1	XM_990244.1		667383	94408468	XM_990244.1	LOC667383	XP_995338.1	ILMN_1215335	001300692	S	1945	AGTCCCTGCTGAACTATCCATTCCACAATGATGCCCCGAGTCCAGACACC	X	-	151738975-151739024	XqF3	PREDICTED: Mus musculus similar to ring finger protein 168 (LOC667383), mRNA.					
Mus musculus	RefSeq	ILMN_209622	ILMN_209622	GLYCTK	NM_174846.4	NM_174846.4		235582	88759353	NM_174846.4	Glyctk	NP_777271.3	ILMN_3029434	001980360	I	175	GTGGCCATGATGGATGGTGGGGTTCTGTCCGTGGCCTCACTCCTTCTCCT	9	-	106060245-106060294	9qF1	Mus musculus glycerate kinase (Glyctk), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + (R)-glycerate = ADP + 3-phospho-(R)-glycerate [goid 8887] [evidence IEA]	C430006L12	C430006L12
Mus musculus	RefSeq	ILMN_209622	ILMN_209622	GLYCTK	NM_174846.4	NM_174846.4		235582	88759353	NM_174846.4	Glyctk	NP_777271.3	ILMN_3102653	005080246	A	4019	GGACATCCAGTGCTACCCAGAGAGAACCCCTGTCTCACCAAGAACAGCAG	9	-	106055348-106055397	9qF1	Mus musculus glycerate kinase (Glyctk), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + (R)-glycerate = ADP + 3-phospho-(R)-glycerate [goid 8887] [evidence IEA]	C430006L12	C430006L12
Mus musculus	RefSeq	ILMN_210001	ILMN_210001	CTSM	NM_022326.2	NM_022326.2		64139	31981228	NM_022326.2	Ctsm	NP_071721.2	ILMN_2927215	000730674	S	1478	AACACCTCTGTAAGATAATGTTTTTAATTAGAGATTCAATGTAAGCTAAT	13	-	61637445-61637494	13qB3	Mus musculus cathepsin M (Ctsm), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	Catm; AI324100; 1600027J17Rik	Catm; AI324100; 1600027J17Rik
Mus musculus	Riken	ILMN_206473	ILMN_206473	D430017D17RIK	ri|D430017D17|PX00193H08|AK084939|3796					AK084939	D430017D17Rik		ILMN_1245252	002900050	S	3117	CTGCTGCCTAGGGAATGATATTGCCCACAGTGGGCTTGTCTGTCCACCTC										
Mus musculus	RefSeq	ILMN_220435	ILMN_220435	AW551984	NM_178737.3	NM_178737.3		244810	31581558	NM_178737.3	AW551984	NP_848852.1	ILMN_2721975	000160161	S	2467	CTGGCCGTGATCTGGCTGCATGCCAATGGCAAGGAATTGAAGGACGAGTG	9	-	39340260-39340309	9qA5.1	Mus musculus expressed sequence AW551984 (AW551984), mRNA.		Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]		3222402N16	3222402N16
Mus musculus	RefSeq	ILMN_207513	ILMN_207513	EDIL3	XM_127411.3	XM_127411.3			38074965	XM_127411.3	Edil3		ILMN_1260562	006370403	I	1894	CCAGTATACTGAGGGTCAAGGCAGTCATGCTGAAACTACATGAGGTCAGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187699	ILMN_231926	ZFP580	XM_920440.2	XM_920440.2		68992	94379561	XM_920440.2	Zfp580	XP_925533.1	ILMN_2446373	002340309	S	580	TCGCGGCACCGCGCCACCCACCGTGCGCGCGCTGGTCCACCTCACACCTG				7qA1	PREDICTED: Mus musculus zinc finger protein 580, transcript variant 5 (Zfp580), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213257	ILMN_213257	IGH-VJ558	scl0380791.1_239				51767062	XM_354700	Igh-VJ558		ILMN_2772264	000240242	S	912	GCGTGTATCAGCTGAAATCTGGAAACAGGGTGACCAGTACTCCTGCATGG										
Mus musculus	MEEBO	ILMN_187440	ILMN_187440	ITGB8	scl41919.6.1_8				51767199	XM_484197	Itgb8		ILMN_2444158	003370411	S	2	GATGTTGTGGCTCATCCAGGAAGGAACGTTGGGCAAAATAACATGCTGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The chemical reactions and pathways involving ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1573] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_244940	ILMN_244940	RAD17	NM_001044371.1	NM_001044371.1		19356	113199778	NM_001044371.1	Rad17	NP_001037836.1	ILMN_3104289	000670202	A	2224	CAGCGAGGAGACATAGAGAACAGCCTGCCAATCAGGTTGCTCCTTGAGAG	13	-	101387564-101387598:101387599-101387613	13qD1	Mus musculus RAD17 homolog (S. pombe) (Rad17), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	9430035O09Rik; MmRad24	9430035O09Rik; MmRad24
Mus musculus	MEEBO	ILMN_190414	ILMN_190414	2210411A11RIK	scl7298.1.1_194						2210411A11Rik		ILMN_2469946	002630059	S	4	GTTTGAGTCTCGTGTTTAGGGCCAACCCAAGCAGGACAATTGAGATGCCA										
Mus musculus	RefSeq	ILMN_219094	ILMN_219094	SNIP1	NM_175246.2	NM_175246.2		76793	31340721	NM_175246.2	Snip1	NP_780455.1	ILMN_2974480	005050239	S	2014	GTGTCTAAACGAGGTTGTGTAGCTTCCACACTTCCAGTTCATCTTTGACC	4	+	124576036-124576085	4qD2.2	Mus musculus Smad nuclear interacting protein 1 (Snip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2410133M08Rik	2410133M08Rik
Mus musculus	RefSeq	ILMN_184319	ILMN_184319	VPS41	NM_172120.2	NM_172120.2		218035	31559893	NM_172120.2	Vps41	NP_742118.2	ILMN_2439130	000380605	S	6	CCCACCCTTTGCCACTCTCCACTGAGTGACTGCTGGACCACAGCAGCTGT	13	+	18724769-18724780:18724781-18724801:18730653-18730669	13qA2	Mus musculus vacuolar protein sorting 41 (yeast) (Vps41), mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Vam2; mVam2; AI317346; MGC159002	Vam2; mVam2; AI317346; MGC159002
Mus musculus	RefSeq	ILMN_215605	ILMN_245521	DLGAP4	NM_001042487.1	NM_001042487.1		228836	109891939	NM_001042487.1	Dlgap4	NP_001035952.1	ILMN_2661493	006400100	S	686	TGCTTCTCTGCCCGATCCCCTGTCGCCCCTTTTCTCTGCTCCTTGTCACT	2	+	156547700-156547749	2qH1	Mus musculus discs, large homolog-associated protein 4 (Drosophila) (Dlgap4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]		BC024558; mKIAA0964; KIAA0964; WBP16; MGC37636; AI225853; Sapap4; MGC117830; DAP4	BC024558; mKIAA0964; KIAA0964; WBP16; MGC37636; AI225853; Sapap4; MGC117830; DAP4
Mus musculus	RefSeq	ILMN_185099	ILMN_245521	DLGAP4	NM_001042487.1	NM_001042487.1		228836	109891939	NM_001042487.1	Dlgap4	NP_001035952.1	ILMN_1220861	005260440	S	2025	ACAAGCAGCGTCAGGAGGCCAGAAAGAGACTCCTGGCCGCCAAGCGAGCA	2	+	156588509-156588558	2qH1	Mus musculus discs, large homolog-associated protein 4 (Drosophila) (Dlgap4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]		BC024558; mKIAA0964; KIAA0964; WBP16; MGC37636; AI225853; Sapap4; MGC117830; DAP4	BC024558; mKIAA0964; KIAA0964; WBP16; MGC37636; AI225853; Sapap4; MGC117830; DAP4
Mus musculus	RefSeq	ILMN_245521	ILMN_245521	DLGAP4	NM_001042487.1	NM_001042487.1		228836	109891939	NM_001042487.1	Dlgap4	NP_001035952.1	ILMN_3032049	001710692	I	348	GATTTCCTGGGGGTTATCTCCACCTAGTCCGCATTTCCCGGAGGGTTTCC	2	+	156547362-156547411	2qH1	Mus musculus discs, large homolog-associated protein 4 (Drosophila) (Dlgap4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]		BC024558; mKIAA0964; KIAA0964; WBP16; MGC37636; AI225853; Sapap4; MGC117830; DAP4	BC024558; mKIAA0964; KIAA0964; WBP16; MGC37636; AI225853; Sapap4; MGC117830; DAP4
Mus musculus	RefSeq	ILMN_245521	ILMN_245521	DLGAP4	NM_001042487.1	NM_001042487.1		228836	109891939	NM_001042487.1	Dlgap4	NP_001035952.1	ILMN_3105499	000990754	A	3334	GGGCCGGACCCAGCAGTTTGGCGTATCGGGCTGTTCTATACTGTGCATAT	2	+	156589818-156589867	2qH1	Mus musculus discs, large homolog-associated protein 4 (Drosophila) (Dlgap4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]		BC024558; mKIAA0964; KIAA0964; WBP16; MGC37636; AI225853; Sapap4; MGC117830; DAP4	BC024558; mKIAA0964; KIAA0964; WBP16; MGC37636; AI225853; Sapap4; MGC117830; DAP4
Mus musculus	RefSeq	ILMN_217822	ILMN_217822	PLIN	NM_175640.1	NM_175640.1		103968	28316725	NM_175640.1	Plin	NP_783571.1	ILMN_2687984	006420452	S	1494	GCGCAGAGTCAGCGACAGCTTCTTCCGGCCCAGCGTCATGGAGCCCATCC	7	-	86866347-86866396	7qD3	Mus musculus perilipin (Plin), mRNA.	Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	perilipin A; 6030432J05Rik; perilipin B; Peri	perilipin A; 6030432J05Rik; perilipin B; Peri
Mus musculus	RefSeq	ILMN_213816	ILMN_213816	GBL	NM_019988.2	NM_019988.2		56716	31542884	NM_019988.2	Gbl	NP_064372.2	ILMN_2906471	003520241	S	3181	GGACTCTTGGCCTGTGCAGAACATGGGGTCTTGGTGTGTGTTAGAGCTGG	17	-	24201280-24201329	17qA3.3	Mus musculus G protein beta subunit-like (Gbl), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610033N12Rik; AI851821; AA409454; AI505104	0610033N12Rik; AI851821; AA409454; AI505104
Mus musculus	RefSeq	ILMN_213816	ILMN_213816	GBL	NM_019988.2	NM_019988.2		56716	31542884	NM_019988.2	Gbl	NP_064372.2	ILMN_2906473	007650692	S	3241	AGAATTGGCTAGGTCTTCGCCAGGGTGATTTTGATCTGGTTGGGCAGACT	17	-	24201220-24201269	17qA3.3	Mus musculus G protein beta subunit-like (Gbl), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610033N12Rik; AI851821; AA409454; AI505104	0610033N12Rik; AI851821; AA409454; AI505104
Mus musculus	Riken	ILMN_202404	ILMN_202404	4930599C08RIK	ri|4930599C08|PX00037E09|AK016416|910					AK016416	4930599C08Rik		ILMN_2549353	005560332	S	704	CCTATGCTCATTCGAGTACCCCAGTTGAAGGTATTGGGCCACTCTTCCCC										
Mus musculus	MEEBO	ILMN_189792	ILMN_189792	9629514_7_RC	9629514_7_rc						9629514_7_rc		ILMN_1218519	001230039	S	5	TGGCCAGCTTACCTCCCGGTGGTGGGTCGGTGGTCCCTGGGCAAGGGTCT										
Mus musculus	RefSeq	ILMN_198112	ILMN_326172	LOC433943	XR_034042.1	XR_034042.1		433943	149254572	XR_034042.1	LOC433943		ILMN_1250136	006860070	S	273	ATCCTGTGCTACCTTGCCAGCAAGCACCACCTGGGTGGAGAGACAGAGGA	5	-	117083298-117083347	5qF	PREDICTED: Mus musculus similar to Glutathione S-transferase Mu 1 (GST class-mu 1) (Glutathione S-transferase GT8.7) (pmGT10) (GST 1-1) (LOC433943), misc RNA.					
Mus musculus	MEEBO	ILMN_187661	ILMN_187661	USP24	scl072686.1_177	XM_131566.5			38078625	XM_131566.5	Usp24		ILMN_2446032	006550278	S	15	CCTCCCTGCTAGCACCAAGGCGTGTACAGCATCTTAAGCTTGGAACAAGC								Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211066	ILMN_211066	PISD	NM_177298.3	NM_177298.3		320951	126722756	NM_177298.3	Pisd	NP_796272.2	ILMN_2718356	001470647	S	223	AGGTGGAGGGTATGCCGGGTACCGGCAGTATGAGAAGTACAGGGAACGGA	5	-	33107474-33107523	5qB1	Mus musculus phosphatidylserine decarboxylase (Pisd), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of the reaction: phosphatidyl-L-serine = phosphatidylethanolamine + CO2 [goid 4609] [evidence IEA]	9030221M09Rik	9030221M09Rik
Mus musculus	RefSeq	ILMN_194735	ILMN_194735	VAMP3	NM_009498.3	NM_009498.3		22319	31340659	NM_009498.3	Vamp3	NP_033524.1	ILMN_2881480	005700168	S	1848	GGCGTGTGCCACCAACGCCCAACTGGTTCTAGTTTTTTATCTGTTCCCCT	4	-	149891322-149891371	4qE2	Mus musculus vesicle-associated membrane protein 3 (Vamp3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		ceb; VAMP-3; D130027G05Rik	ceb; VAMP-3; D130027G05Rik
Mus musculus	RefSeq	ILMN_194735	ILMN_194735	VAMP3	NM_009498.3	NM_009498.3		22319	31340659	NM_009498.3	Vamp3	NP_033524.1	ILMN_2881477	000110747	S	1918	GATGTTGAAGATATGCCTTGCCGCATCAGCCTAGGGCTTCTGTCCTGGTC	4	-	149891252-149891301	4qE2	Mus musculus vesicle-associated membrane protein 3 (Vamp3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		ceb; VAMP-3; D130027G05Rik	ceb; VAMP-3; D130027G05Rik
Mus musculus	RefSeq	ILMN_199442	ILMN_238751	LOC624245	XM_893405.2	XM_893405.2		624245	94374230	XM_893405.2	LOC624245	XP_898498.1	ILMN_2535219	000520136	S	280	CTGATCAAAGAGATCCAGCTCACTACCGAGGAGACAAATGAGCTGAGAGA	5	-	14937129-14937178	5qA1	PREDICTED: Mus musculus hypothetical LOC624245, transcript variant 1 (LOC624245), mRNA.					
Mus musculus	MEEBO	ILMN_218259	ILMN_218259	DVL1	scl24607.15_131	NM_010091.2			46560588	NM_010091.2	Dvl1		ILMN_1228762	002340093	S	2982	GTTTGCATGCCCCTTTCCCCACCTGCTACTTGGCACATGACAACACAGTT						The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence ISA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence TAS]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process that modulates levels of neurotransmitter [goid 1505] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IGI]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190219	ILMN_190219	D930030O05RIK	scl32559.1_711				31342914	NM_177149	D930030O05Rik		ILMN_1259092	006900292	S	16	CCAGGGACAAAGTGACAAAGCAAACTAAAGAGTAAGCCAGCCTCCCAGGC										
Mus musculus	MEEBO	ILMN_190219	ILMN_190219	D930030O05RIK	scl32559.1_711				31342914	NM_177149	D930030O05Rik		ILMN_2699578	003440632	S	2746	GTTGTGCTGTCTTATTCCATATGGGGTCTGCAGTGTGTTCTAGGAGTCAG										
Mus musculus	RefSeq	ILMN_196705	ILMN_311337	LOC666185	XM_001473218.1	XM_001473218.1		666185	149264462	XM_001473218.1	LOC666185	XP_001473268.1	ILMN_2525496	004480131	S	49	CTAGATCCTTGGACTTCCATTCTACAGCTGCTACTGACCGTTGTTGGGAG				13qB3	PREDICTED: Mus musculus hypothetical LOC666185 (LOC666185), mRNA.					
Mus musculus	MEEBO	ILMN_185935	ILMN_185935	9530020O07RIK	scl48591.1_426						9530020O07Rik		ILMN_2431245	005860612	S	19	TCCCTTGAGACTAGCCAGGCATGCCTTCAAAGAAACATCGCTCACACACA										
Mus musculus	RefSeq	ILMN_201527	ILMN_201527	PRAMEL4	NM_178248.2	NM_178248.2		347709	31342426	NM_178248.2	Pramel4	NP_839979.1	ILMN_2720718	006480463	S	1555	GCACCCACATGGTGGCTCACAACCATCCATAGCAAGATCTGACTCCCTCT	4	+	143335277-143335326		Mus musculus preferentially expressed antigen in melanoma like 4 (Pramel4), mRNA.				D4Ertd792e; C79430	D4Ertd792e; C79430
Mus musculus	RefSeq	ILMN_201527	ILMN_201527	PRAMEL4	NM_178248.2	NM_178248.2		347709	31342426	NM_178248.2	Pramel4	NP_839979.1	ILMN_2987535	006860338	S	600	GGTGATCTTTGAGAAGCTGGAGTTTACAGGCAAGCACTCCTCAATCCAGG	4	+	143333488-143333525:143333571-143333582		Mus musculus preferentially expressed antigen in melanoma like 4 (Pramel4), mRNA.				D4Ertd792e; C79430	D4Ertd792e; C79430
Mus musculus	RefSeq	ILMN_224252	ILMN_247538	MCPT4	NM_010779.2	NM_010779.2		17227	114205405	NM_010779.2	Mcpt4	NP_034909.2	ILMN_1240746	001820367	S	562	AACTATTGGCATTACGACTATAACCTCCAGGTCTGCGTGGGCAGTCCCAG	14	-	56679354-56679403	14qC3	Mus musculus mast cell protease 4 (Mcpt4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]	Mcp-4; MMCP-4A; MMCP-4B; MMCP-4	Mcp-4; MMCP-4A; MMCP-4B; MMCP-4
Mus musculus	RefSeq	ILMN_193104	ILMN_251720	MMRN2	NM_153127.3	NM_153127.3		105450	122937369	NM_153127.3	Mmrn2	NP_694767.3	ILMN_2761918	000430451	S	3175	TCCATGCCTTCCCCAATGGCACGGCTCGGCTTGTCTCTGAGACACTTCCT	14	+	35216713-35216762	14qB	Mus musculus multimerin 2 (Mmrn2), mRNA.				EndoGlyx-1; AA986839; ENDOGLYX1; Emilin3; MGC41271	EndoGlyx-1; AA986839; ENDOGLYX1; Emilin3; MGC41271
Mus musculus	RefSeq	ILMN_201435	ILMN_201435	LOC382161	XM_356261.1	XM_356261.1			38093699	XM_356261.1	LOC382161		ILMN_1257465	003290647	S	996	GTGGCAAAGCCTTTACATGTCACAATATCTTCAAATCCCATAGAAGAACG										
Mus musculus	MEEBO	ILMN_216478	ILMN_216478	1810007E14RIK	scl053906.4_266	NM_025308.1			13384667	NM_025308.1	1810007E14Rik		ILMN_2671528	002680241	S	421	ATGAAGACACAAGATGAGGAGTCTGCATGGAATCCCCAGCTGACCTGGCA										
Mus musculus	MEEBO	ILMN_191122	ILMN_191122	1700008F19RIK	scl6196.1.1_256						1700008F19Rik		ILMN_2476303	001010133	S	20	TTGGTCGTGTAATACCTCACAGCCAATATTCTATACCACCATACTGTGCA										
Mus musculus	RefSeq	ILMN_215516	ILMN_215516	IGSF1	NM_183336.1	NM_183336.1		209268	41281998	NM_183336.1	Igsf1	NP_899179.1	ILMN_1258853	006860711	S	2500	CTTGAGTTGGGTCAAGAGGATTCTGGGCGTGGCAAGCTCTACAGGTCAAG	X	-	47135829-47135878	XqA5	Mus musculus immunoglobulin superfamily, member 1 (Igsf1), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	InhBP/p120; 5530402E03; 5330413N23; AI747649; mKIAA0364	InhBP/p120; 5530402E03; 5330413N23; AI747649; mKIAA0364
Mus musculus	RefSeq	ILMN_215516	ILMN_215516	IGSF1	NM_183336.1	NM_183336.1		209268	41281998	NM_183336.1	Igsf1	NP_899179.1	ILMN_2660505	001030193	S	2502	TTGAGTTGGGTCAAGAGGATTCTGGGCGTGGCAAGCTCTACAGGTCAAGC	X	-	47135827-47135876	XqA5	Mus musculus immunoglobulin superfamily, member 1 (Igsf1), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	InhBP/p120; 5530402E03; 5330413N23; AI747649; mKIAA0364	InhBP/p120; 5530402E03; 5330413N23; AI747649; mKIAA0364
Mus musculus	RefSeq	ILMN_219590	ILMN_238130	TSPAN14	NM_145928.1	NM_145928.1		52588	22122344	NM_145928.1	Tspan14	NP_666040.1	ILMN_1257666	000620390	S	2138	CTACTCTCTAGTGCTTCTTTATAACTTGTATCTGTCCTTACCGTTCAGGG	14	-	41720021-41720070	14qB	Mus musculus tetraspanin 14 (Tspan14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			D14Ertd226e; Tm4sf14; MGC36554; AA958793	D14Ertd226e; Tm4sf14; MGC36554; AA958793
Mus musculus	RefSeq	ILMN_223326	ILMN_223326	PCBP3	NM_021568.1	NM_021568.1		59093	10947013	NM_021568.1	Pcbp3	NP_067543.1	ILMN_1213692	001300681	S	1550	GTGTAGCCCTCCACGCATTGGCATGCAGCTCTTTACTTTACTGCTCAACG	10	-	76225015-76225064	10qC1	Mus musculus poly(rC) binding protein 3 (Pcbp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AlphaCP-3	AlphaCP-3
Mus musculus	RefSeq	ILMN_199524	ILMN_199524	LOC382670	XM_356620.1	XM_356620.1			38073965	XM_356620.1	LOC382670		ILMN_1253585	005130286	S	327	GCTGTGCAGTACCAAGGACTCTGGAGCTGATGCCACAACACTGGGATCCT										
Mus musculus	RefSeq	ILMN_192845	ILMN_192845	TMEM26	NM_177794.2	NM_177794.2		327766	31343008	NM_177794.2	Tmem26	NP_808462.1	ILMN_2491852	002360324	S	2723	AGGTCAAATTTTAAAGGTGTGTTATTCAAAGTTCTTATCAATGAGATTTG	10	+	68243095-68243144	10qB5.3	Mus musculus transmembrane protein 26 (Tmem26), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			3230401A06; AI195372	3230401A06; AI195372
Mus musculus	RefSeq	ILMN_250529	ILMN_250529	SCN2B	NM_001014761.1	NM_001014761.1		72821	67906203	NM_001014761.1	Scn2b	NP_001014761.1	ILMN_2935462	001820706	S	3868	GACCCAGCTGCGGGGGCAGGCTGGATTTCTATAGCAGTTTGTCAGATTGC	9	+	44880973-44881022	9qA5.2	Mus musculus sodium channel, voltage-gated, type II, beta (Scn2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence ISO]	Gm183; MGC116602; AI840361; 2810451E09Rik	Gm183; MGC116602; AI840361; 2810451E09Rik
Mus musculus	RefSeq	ILMN_187744	ILMN_187744	USP39	NM_138592.1	NM_138592.1		28035	20070403	NM_138592.1	Usp39	NP_613058.1	ILMN_2945400	003310435	S	1921	CTTCCCTTTCAGCATCAGCAGGCAGAACTCTTACAGATGGATGCCTTATT	6	-	72248451-72248500	6qC1	Mus musculus ubiquitin specific peptidase 39 (Usp39), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	SAD1; AA408960; AI894154; D6Wsu157e; CGI-21	SAD1; AA408960; AI894154; D6Wsu157e; CGI-21
Mus musculus	RefSeq	ILMN_187744	ILMN_187744	USP39	NM_138592.1	NM_138592.1		28035	20070403	NM_138592.1	Usp39	NP_613058.1	ILMN_2471268	005570682	S	17	AGCCGTCCACAAGAACACCACCTATGATCTCATCGCCAACATCGTGCATG	6	-	72274618-72274658:72274659-72274667	6qC1	Mus musculus ubiquitin specific peptidase 39 (Usp39), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	SAD1; AA408960; AI894154; D6Wsu157e; CGI-21	SAD1; AA408960; AI894154; D6Wsu157e; CGI-21
Mus musculus	RefSeq	Gapd	ILMN_309893	LOC100042427	XM_001478518.1	XM_001478518.1		100042427	149265159	XM_001478518.1	LOC100042427	XP_001478568.1	ILMN_2588056	006940475	S	1109	GCCCTATCCCAACTCGGCCCCCAACACTGAGCATCTCCCTCACAATTTCC	14	-	12113348-12113397	14qA1	PREDICTED: Mus musculus similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 4 (LOC100042427), mRNA.					
Mus musculus	RefSeq	ILMN_207562	ILMN_309893	LOC100042427	XM_001478518.1	XM_001478518.1		100042427	149265159	XM_001478518.1	LOC100042427	XP_001478568.1	ILMN_2758581	003290020	S	923	CCACTCTTCCACCTTCGATGCCGGGGCTGGCATTGCTCTCAATGACAACT	14	-	12113534-12113583	14qA1	PREDICTED: Mus musculus similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 4 (LOC100042427), mRNA.					
Mus musculus	RefSeq	ILMN_186595	ILMN_309893	LOC100042427	XM_001478518.1	XM_001478518.1		100042427	149265159	XM_001478518.1	LOC100042427	XP_001478568.1	ILMN_1246408	002140433	S	988	CCTGGTATGACAATGAATACGGCTACAGCAACAGGGTGGTGGACCTCATG	14	-	12113469-12113518	14qA1	PREDICTED: Mus musculus similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 4 (LOC100042427), mRNA.					
Mus musculus	RefSeq	ILMN_199715	ILMN_199715	LOC382922	XM_356752.1	XM_356752.1			38076485	XM_356752.1	LOC382922		ILMN_1247977	003990670	S	343	GCAATTCCGGGAGCCAATATAGAGTTCCACTCACCTGTGATCCAGAGGTC										
Mus musculus	RefSeq	ILMN_230308	ILMN_230308	KRT32	NM_010665.1	NM_010665.1		16670	6754485	NM_010665.1	Krt32	NP_034795.1	ILMN_2895346	001500762	S	1302	CTGGCCTGGTGCCTCGTCACACCAAGTCTGACCACAATCCTGAGACCAAG	11	-	99897148-99897197	11qD	Mus musculus keratin 32 (Krt32), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt1-2; MGC144673; Ha3; mHa2; MGC144672	Krt1-2; MGC144673; Ha3; mHa2; MGC144672
Mus musculus	MEEBO	ILMN_219404	ILMN_219404	LAF4	scl000824.1_3				30354145	BC052061	Laf4		ILMN_2708367	001450494	S	509	GCCAGAGGAATGATTCTCTAGTTCTGGAAGTTCAGGCATCAGCCAGCAGA										
Mus musculus	RefSeq	ILMN_201454	ILMN_201454	LOC385198	XM_358113.1	XM_358113.1			38093964	XM_358113.1	LOC385198		ILMN_2542347	006520750	S	28	CCACAGTGGAGCACTGTGACAGCACAGTTGGAGCACTGTGAAATAAGAGT										
Mus musculus	RefSeq	ILMN_195135	ILMN_224631	DCLRE1B	NM_133865.2	NM_133865.2		140917	70778965	NM_133865.2	Dclre1b	NP_598626.2	ILMN_2669813	001400048	S	553	TTGGGCAAGAAACCATGACTGTAACGCTCATAGATGCCAATCACTGCCCT	3	-	103613031-103613036:103613012-103613055	3qF2.2	Mus musculus DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) (Dclre1b), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]		AI452214; mSNM1B	AI452214; mSNM1B
Mus musculus	RefSeq	ILMN_195135	ILMN_224631	DCLRE1B	NM_133865.2	NM_133865.2		140917	70778965	NM_133865.2	Dclre1b	NP_598626.2	ILMN_1255335	005270554	S	1850	CGACAAGCAAGTGGAAAAACACCAGAGAGTACAGCGTAGCAGTCCTGCAG	3	-	103607752-103607801	3qF2.2	Mus musculus DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) (Dclre1b), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]		AI452214; mSNM1B	AI452214; mSNM1B
Mus musculus	RefSeq	ILMN_195135	ILMN_224631	DCLRE1B	NM_133865.2	NM_133865.2		140917	70778965	NM_133865.2	Dclre1b	NP_598626.2	ILMN_2638404	004880730	S	1977	CAGCAGCTCTTCTGAAGCTTTTCATGAAGTCCTAGTGCCTATGAGACCCG	3	-	103607625-103607674	3qF2.2	Mus musculus DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) (Dclre1b), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]		AI452214; mSNM1B	AI452214; mSNM1B
Mus musculus	RefSeq	ILMN_189989	ILMN_248895	9130011J15RIK	NM_172396.3	NM_172396.3		66818	144922668	NM_172396.3	9130011J15Rik	NP_765984.1	ILMN_2593484	005080193	S	1876	GTCCTTCACACCCGCAGCATGCCTGAGCCTACCCACTTGCCTAGCATTGT	8	-	75090013-75090062	8qB3.3	Mus musculus RIKEN cDNA 9130011J15 gene (9130011J15Rik), mRNA. XM_919242	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_213115	ILMN_213115	RHOD	NM_007485.2	NM_007485.2		11854	20589964	NM_007485.2	Rhod	NP_031511.1	ILMN_2862379	001570154	S	922	TTATAGACTCCTGTGCCCAATCCTGGACCTGCGTCCTGAGCGGGGTCTGT	19	-	4425823-4425872	19qA	Mus musculus ras homolog gene family, member D (Rhod), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rho; RhoM; Arhd; AI326383; RhoHP1	Rho; RhoM; Arhd; AI326383; RhoHP1
Mus musculus	RefSeq	ILMN_213115	ILMN_213115	RHOD	NM_007485.2	NM_007485.2		11854	20589964	NM_007485.2	Rhod	NP_031511.1	ILMN_2862386	004230017	S	1245	TAAGACCTTGAGGAAGTTCTAGGCCTCAGCCTTTCATCTGTAAAATGGCC	19	-	4425500-4425549	19qA	Mus musculus ras homolog gene family, member D (Rhod), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rho; RhoM; Arhd; AI326383; RhoHP1	Rho; RhoM; Arhd; AI326383; RhoHP1
Mus musculus	RefSeq	ILMN_217903	ILMN_217903	AREG	NM_009704.3	NM_009704.3		11839	133891746	NM_009704.3	Areg	NP_033834.1	ILMN_1238547	001990373	S	1042	GGTTCCAGATGCCCAGTTGTCACTTTTTATGATAGTCTTACTTCTGTACA	5	+	91577301-91577350	5qE1	Mus musculus amphiregulin (Areg), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Sdgf; AR	Sdgf; AR
Mus musculus	RefSeq	ILMN_198144	ILMN_198144	LOC268936	XM_196171.3	XM_196171.3			38082140	XM_196171.3	LOC268936		ILMN_2530641	004150722	S	5825	CGCTAGAGGCTGATGGTGGGTGCTCTCCTTACAGAAGCAGAGCTCACTGA										
Mus musculus	RefSeq	ILMN_199428	ILMN_199428	OLFR159	NM_019476.1	NM_019476.1		29849	11464980	NM_019476.1	Olfr159	NP_062349.1	ILMN_1213110	002000348	S	600	GGCAGTGGCTAATGCAATGTTTTTGGGGGTCCCTGTCCTCTTCATCTTTG	4|NT_039296.1	+	68452-68501	4qB1	Mus musculus olfactory receptor 159 (Olfr159), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence TAS]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr37e; mOR37e; MOR262-5	Olfr37e; mOR37e; MOR262-5
Mus musculus	Riken	ILMN_204487	ILMN_204487	B130042I06RIK	ri|B130042I06|PX00157P09|AK045165|2125					AK045165	B130042I06Rik		ILMN_2565355	003840162	S	1634	CTTGCTGTGGAAGAAGAATGAGCGATTCCCCAGGGCCACCCAGCTGATAG										
Mus musculus	Riken	ILMN_203725	ILMN_203725	9830123K24RIK	ri|9830123K24|PX00117P18|AK036507|2491					AK036507	9830123K24Rik		ILMN_2559504	003780152	S	1434	GGTCTTTCCAGCATGTTTTCTGCAGTGTTACCTGATCCCTGAGGGCAGAG										
Mus musculus	MEEBO	ILMN_221110	ILMN_221110	9130206N08RIK	scl38658.11.1_4	XM_125729.4			38090575	XM_125729.4	9130206N08Rik		ILMN_2731183	005340484	S	2500	CCGGCAGATACACAAGGTCCTTCACATGGAACAGTTACCTCCACGGACCA										
Mus musculus	Riken	ILMN_203343	ILMN_203343	6330579M01RIK	ri|6330579M01|PX00044E08|AK032087|2435					AK032087	6330579M01Rik		ILMN_1256365	000620465	S	2269	GGAAGCCCTGAGTTCAAGCCCCAGCACCACACAAAACTAGGAGTGGAGGC										
Mus musculus	RefSeq	ILMN_211330	ILMN_211330	MGEA5	NM_023799.3	NM_023799.3		76055	118130599	NM_023799.3	Mgea5	NP_076288.1	ILMN_2614706	001690717	S	4545	AACAAGTTGCTTTTTGTTTAATGTTGGCTTTCAATAATCACATGGGATGA	19	-	45824951-45825000	19qC3	Mus musculus meningioma expressed antigen 5 (hyaluronidase) (Mgea5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IEA]	mKIAA0679; Hy5; 5830447M11Rik; AA408215; Ncoat; 4833427O07Rik; 2810009A20Rik	mKIAA0679; Hy5; 5830447M11Rik; AA408215; Ncoat; 4833427O07Rik; 2810009A20Rik
Mus musculus	MEEBO	ILMN_220287	ILMN_220287	PTCHD1	scl53685.5.1_179	XM_142262.3			38086897	XM_142262.3	Ptchd1		ILMN_2720158	006280102	S	2367	AAATGGGTTAAAAATGCCCTGGAAGTGCATGGGGTAGCTATTTTACAGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195696	ILMN_195696	TRIP10	NM_134125.3	NM_134125.3		106628	146149189	NM_134125.3	Trip10	NP_598886.1	ILMN_1213117	002320201	S	1685	AAACAGGGAGCTGAGGGCTACGTGCCCACCTCTTACCTCCGAGTCACACT				17qD	Mus musculus thyroid hormone receptor interactor 10 (Trip10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence TAS]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI646975; Cip4	AI646975; Cip4
Mus musculus	RefSeq	ILMN_223091	ILMN_223091	BHLHB3	NM_024469.1	NM_024469.1		79362	13277377	NM_024469.1	Bhlhb3	NP_077789.1	ILMN_2759227	000830184	S	983	TACGTACAGCCCTGGCTAGACAAGAGCGGCCTGGACAAGTATCTGTACCC	6	-	145811645-145811694	6qG3	Mus musculus basic helix-loop-helix domain containing, class B3 (Bhlhb3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence TAS]	Bhlhb2l; DEC2; Sharp1	Bhlhb2l; DEC2; Sharp1
Mus musculus	Riken	ILMN_206375	ILMN_206375	LAMP2	ri|6430411L14|PX00044N10|AK078193|2182					AK078193	Lamp2		ILMN_1258632	000670682	S	1876	ACTTTAGAAAGGGGTCTCGGGGCTGGAGAGATGGCTCAGTCATTGAAGGC						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding the platelet dense granule [goid 31088] [evidence ISO]				
Mus musculus	Riken	ILMN_204062	ILMN_204062	A630064F15RIK	ri|A630064F15|PX00146H14|AK042155|1487					AK042155	A630064F15Rik		ILMN_1226857	002480014	S	1192	ACTGGGCATGGAGTGAGCTCTTGGCAGGACTGCAGGTACCCCTGTTCCAT										
Mus musculus	RefSeq	ILMN_257665	ILMN_257665	OTTMUSG00000005300	NR_002890.1	NR_002890.1		654472	85662718	NR_002890.1	OTTMUSG00000005300		ILMN_2943710	005390180	S	245	GCATAGACTAGTGGTGGGAAGGAAGATTGTAACAGGGAGGTGTGGATACC	11	+	26685352-26685401	11qA3.3	Mus musculus predicted gene, OTTMUSG00000005300 (OTTMUSG00000005300), non-coding RNA.					
Mus musculus	RefSeq	ILMN_214140	ILMN_214140	D19ERTD737E	NM_029648.5	NM_029648.5		76539	146149157	NM_029648.5	D19Ertd737e	NP_083924.2	ILMN_1249292	001780014	S	1846	CATTCTCTATGATTATTTATGAAAAGGAAATGGTCTGATTGTGCTAGACA				19qD3	Mus musculus DNA segment, Chr 19, ERATO Doi 737, expressed (D19Ertd737e), mRNA.				2610015K05Rik; 2310065H12Rik	2610015K05Rik; 2310065H12Rik
Mus musculus	Riken	ILMN_207212	ILMN_207212	C530041E22RIK	ri|C530041E22|PX00669D20|AK083061|2735					AK083061	C530041E22Rik		ILMN_1232786	000060373	S	2474	CTAGAGTCTGGTTCATCCTCTCACCAGCAGCACTGAACTTGCCATGCATC										
Mus musculus	Riken	ILMN_203355	ILMN_203355	B430315A04RIK	ri|B430315A04|PX00072P09|AK046695|2295					AK046695	B430315A04Rik		ILMN_1247848	002340010	S	1872	CCGCAGTGGCTCAGGACTCTGGCAGTACAGTTGCTCTTTGGCTTTGTCTC										
Mus musculus	RefSeq	ILMN_197339	ILMN_197339	LOC277385	XM_205866.2	XM_205866.2			38075220	XM_205866.2	LOC277385		ILMN_1252661	002750639	S	1639	CCTGAAAGCAGGCAGGGTGGCCCTTGGAGGAGGATGGTATAGGTTTTAAG										
Mus musculus	Riken	ILMN_204927	ILMN_204927	C230074J23RIK	ri|C230074J23|PX00176N09|AK048842|1803					AK048842	C230074J23Rik		ILMN_1217197	006940561	S	1301	GGTGACACAGACCAAACGACCAAGAGAGGCGAGGGGCTGAAGATCCATCA										
Mus musculus	MEEBO	ILMN_224237	ILMN_224237	OLFR64	scl32263.5.1_276				22165350	NM_013616	Olfr64		ILMN_2777127	004200743	S	1876	CAGTGTTGCAGGAAGAAGTACCCATGCAAAATACTTTAGTAGAGACATAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_219412	ILMN_219412	ADCK2	NM_178873.3	NM_178873.3		57869	141803492	NM_178873.3	Adck2	NP_849204.1	ILMN_1222224	002370102	S	2915	CTCACACTCTTTGGTCCTCTTTGCTGGTGGTTCTTACCCTTAGACTTAGG	6	+	39538144-39538193	6qB1	Mus musculus aarF domain containing kinase 2 (Adck2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AA408112; BB006057	AA408112; BB006057
Mus musculus	RefSeq	ILMN_218203	ILMN_218203	PIBF1	NM_029454.4	NM_029454.4		52023	118130601	NM_029454.4	Pibf1	NP_083730.2	ILMN_2692914	007320039	S	3072	TGAACGTTCCTAGTTATGAAAACATATAATTATAGGCAAATACAAAAATG	14	+	99579565-99579614	14qE2.2	Mus musculus progesterone immunomodulatory binding factor 1 (Pibf1), transcript variant 2, mRNA.				1700017E21Rik; 4933438D16Rik; 4930513H15Rik; 4933439E17Rik; Pibf1	1700017E21Rik; 4933438D16Rik; 4930513H15Rik; 4933439E17Rik; Pibf1
Mus musculus	RefSeq	ILMN_235201	ILMN_235201	SPAG9	NM_001025430.1	NM_001025430.1		70834	70887783	NM_001025430.1	Spag9	NP_001020601.1	ILMN_3131887	007160433	A	6310	CACTGCCTGTGAAGTTGAGAAGAGACCACTAAACGTGCAGCCTTTGGAAC	11	+	93986806-93986855	11qD	Mus musculus sperm associated antigen 9 (Spag9), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IDA]; Interacting selectively with JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family [goid 8432] [evidence IDA]	Jip4; syd1; JSAP2; 3110018C07Rik; 4831406C20Rik; JLP; 4733401I23Rik; AW552012; Mapk8ip4; JSAP2a	Jip4; syd1; JSAP2; 3110018C07Rik; 4831406C20Rik; JLP; 4733401I23Rik; AW552012; Mapk8ip4; JSAP2a
Mus musculus	RefSeq	ILMN_210931	ILMN_210931	CISD2	NM_025902.2	NM_025902.2		67006	40254510	NM_025902.2	Cisd2	NP_080178.1	ILMN_2610719	005820259	S	2739	CATATAGGTTTACTGGAATTTTTGAATTATTTGTGATTTTAGCCTACTAT	3	-	135069456-135069505	3qG3	Mus musculus CDGSH iron sulfur domain 2 (Cisd2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The external (cytoplasmic face) of the mitochondrial outer membrane [goid 32473] [evidence IDA]	Any process that modulates the frequency, rate or extent of cellular respiration, the enzymatic release of energy from organic compounds [goid 43457] [evidence IMP]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence ISO]	B630006A20Rik; 1500026J14Rik; Zcd2; Noxp70; Miner1; 1500031D15Rik; 1500009M05Rik; AI848398	B630006A20Rik; 1500026J14Rik; Zcd2; Noxp70; Miner1; 1500031D15Rik; 1500009M05Rik; AI848398
Mus musculus	RefSeq	ILMN_222461	ILMN_222461	ATPBD3	NM_145582.1	NM_145582.1		233189	21704169	NM_145582.1	Atpbd3	NP_663557.1	ILMN_2783562	006980474	S	1977	CGGTGTGAACTGCAGGTAGACAGGTTATAGCAAAGCTGAAATCCCTTCTG	7	+	50933185-50933234	7qB4	Mus musculus ATP binding domain 3 (Atpbd3), mRNA.				MGC6894; BC005752	MGC6894; BC005752
Mus musculus	RefSeq	ILMN_222461	ILMN_222461	ATPBD3	NM_145582.1	NM_145582.1		233189	21704169	NM_145582.1	Atpbd3	NP_663557.1	ILMN_2783557	007000403	S	2186	CACAGGCTGGGGTCATCTGAGAAAATGCTTCCATAAGATTGGCCTACAGG	7	+	50933394-50933443	7qB4	Mus musculus ATP binding domain 3 (Atpbd3), mRNA.				MGC6894; BC005752	MGC6894; BC005752
Mus musculus	RefSeq	ILMN_212523	ILMN_212523	ROPN1	NM_030744.2	NM_030744.2		76378	40254139	NM_030744.2	Ropn1	NP_109669.1	ILMN_1218144	007050241	S	772	AGCTGAACACCATGCACCATCTAAAGTCAATTTTCTTTTACGACTGGTAC	16	+	34678624-34678673	16qB3	Mus musculus ropporin, rhophilin associated protein 1 (Ropn1), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ropporin; ODF6; RHPNAP1; 1700008N21Rik; Rppn	ropporin; ODF6; RHPNAP1; 1700008N21Rik; Rppn
Mus musculus	RefSeq	ILMN_213170	ILMN_213170	HDHD1A	NM_026108.2	NM_026108.2		67365	142376210	NM_026108.2	Hdhd1a	NP_080384.1	ILMN_3160253	002510091	S	640	ACACGAAAAGCCACCCTGGTGCTGAGTTCCCTCCACGACTTCAAGCCTGA	18	-	50727641-50727690	18qD1	Mus musculus haloacid dehalogenase-like hydrolase domain (Hdhd1a), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	GS1; 1700121L12Rik	GS1; 1700121L12Rik
Mus musculus	RefSeq	ILMN_209759	ILMN_330311	LOC100048816	XM_001471973.1	XM_001471973.1		100048816	149253134	XM_001471973.1	LOC100048816	XP_001472023.1	ILMN_1253242	006250435	S	2545	TGGGCCAGCCTGCTCCTTCCCTGCTCAGCGTGTGGAGCGGTCCCCAGCCC	4	+	129692313-129692362		PREDICTED: Mus musculus similar to Brain-specific angiogenesis inhibitor 2 (LOC100048816), mRNA.					
Mus musculus	Riken	ILMN_205841	ILMN_205841	A730028C12RIK	ri|A730028C12|PX00149J24|AK042827|1937					AK042827	A730028C12Rik		ILMN_1237335	006580326	S	1587	TAGAGCTGAGGCAGGAGGACTGCCAACAGCAGCAGGGATAGAGCTCACCT										
Mus musculus	RefSeq	ILMN_200552	ILMN_200552	LOC383335	XM_356991.1	XM_356991.1			38083625	XM_356991.1	LOC383335		ILMN_1214267	001740671	S	298	GTCCCTCCCAGCTGTTATGGGTCACTGACTCTCAGCCTTGGTGAGCTGCT										
Mus musculus	RefSeq	ILMN_198246	ILMN_198246	LOC381125	XM_355042.1	XM_355042.1			38083286	XM_355042.1	LOC381125		ILMN_1246877	001450349	S	871	CATTGTAGATTTCCACCCAGTCCTCAGCTTAACAGGCTCTAGGAAGTCCG										
Mus musculus	Riken	ILMN_205985	ILMN_205985	D130074M14RIK	ri|D130074M14|PX00186M01|AK051763|4643					AK051763	D130074M14Rik		ILMN_1233136	005960553	S	4295	GTCCCTGGTGCTGTGATTGGACATGGCAATGGGGATGAAGAGTTAGGGTC										
Mus musculus	Riken	ILMN_202214	ILMN_202214	EMB	ri|2410081C23|ZX00080H11|AK010733|757					AK010733	Emb		ILMN_2547873	006550634	S	355	GCCGGCCTGGTAAGAGCAGAGCTGTTGCAGACAAGAATGGAGAAGAATGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_208655	ILMN_208655	HIST1H4C	NM_178208.1	NM_178208.1		319155	30061348	NM_178208.1	Hist1h4c	NP_835515.1	ILMN_2588244	004040187	S	23	GTAAAGGCCTTGGGAAAGGCGGCGCTAAGCGCCACCGTAAGGTTCTCCGT	13	-	23790246-23790295	13qA3.1	Mus musculus histone cluster 1, H4c (Hist1h4c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199451	ILMN_199451	LOC383490	XM_357090.1	XM_357090.1			38049386	XM_357090.1	LOC383490		ILMN_1234448	005670630	S	20	TCTGGCCTTTAAGGACCCCCTTCCTTTGGGTGAAAGTTCCTGAAGACCTG										
Mus musculus	MEEBO	ILMN_190551	ILMN_190551	A830073O21RIK	scl32535.4_60				31342838	NM_177118	A830073O21Rik		ILMN_2595882	002320113	S	2830	GGCTTATGTACAGATTGCCCCATATTAGAGTCCCTAAAGCATTTGGCCCA										
Mus musculus	MEEBO	ILMN_190551	ILMN_190551	A830073O21RIK	scl32535.4_60				31342838	NM_177118	A830073O21Rik		ILMN_2595885	002690564	S	2844	TTGCCCCATATTAGAGTCCCTAAAGCATTTGGCCCAAAATGGCAACAACG										
Mus musculus	MEEBO	ILMN_190551	ILMN_190551	A830073O21RIK	scl32535.4_60				31342838	NM_177118	A830073O21Rik		ILMN_2471128	002070465	S	19	GCTTCTGTGCAAATCTAATAGCAGTGCCTTTGGGACCCTGGGAGTGCATC										
Mus musculus	MEEBO	ILMN_210018	ILMN_210018	CGREF1	scl26746.6.1_73	XM_181420.1			23625082	XM_181420.1	Cgref1		ILMN_1235937	002370541	S	875	GAGGGAAAAGTAGATACCCTAAGCCCTGAAGAGGAGGCTAGGGGACAGGC							The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_221765	ILMN_221765	MAPT	scl017762.10_59	NM_010838.2			31982778	NM_010838.2	Mapt		ILMN_2740020	001090504	S	1159	GCAGCATCGACATGGTGGACTCACCACAGCTTGCCACACTAGCCGATGAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204338	ILMN_204338	PIK3CG	ri|A430105O15|PX00064B20|AK040543|4805					AK040543	Pik3cg		ILMN_2564205	004850291	S	4590	GCAGGCTCTTACTCTCTGCACCAGGACTAGCTATGAATCTCAGTGGTGAT						A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214546	ILMN_214546	NCF2	NM_010877.4	NM_010877.4		17970	146134362	NM_010877.4	Ncf2	NP_035007.1	ILMN_2751129	002650390	S	2525	GTGAGCAGTTGAAGTTCTAAGCTGTATTTTTACTGCTATATCCTTTAAGG				1qG3	Mus musculus neutrophil cytosolic factor 2 (Ncf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IDA]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence ISA]; The chemical reactions and pathways resulting in the breakdown of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; catabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6742] [evidence ISA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence ISA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IDA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence IPI]	Ncf-2; p67phox; NOXA2	Ncf-2; p67phox; NOXA2
Mus musculus	RefSeq	ILMN_214546	ILMN_214546	NCF2	NM_010877.4	NM_010877.4		17970	146134362	NM_010877.4	Ncf2	NP_035007.1	ILMN_2649101	002100528	S	2481	CCCAAGCCTACCCAGTTGTGGCCATTTTTGTTTCTTGCTGACAAGTGAGC				1qG3	Mus musculus neutrophil cytosolic factor 2 (Ncf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IDA]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence ISA]; The chemical reactions and pathways resulting in the breakdown of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; catabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6742] [evidence ISA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence ISA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IDA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence IPI]	Ncf-2; p67phox; NOXA2	Ncf-2; p67phox; NOXA2
Mus musculus	RefSeq	ILMN_184524	ILMN_225885	SEC24A	NM_175255.3	NM_175255.3		77371	116174773	NM_175255.3	Sec24a	NP_780464.2	ILMN_1244794	006330524	S	6206	GTAACAGACAAGGGCAATCTTGATATATAAATCTGAGCATGCAGTTCTAC	11	-	51506307-51506356	11qB1.3	Mus musculus Sec24 related gene family, member A (S. cerevisiae) (Sec24a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state [goid 30127] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	9430090N21Rik; AI504915	9430090N21Rik; AI504915
Mus musculus	RefSeq	ILMN_212128	ILMN_212128	SNX24	NM_029394.3	NM_029394.3		69226	141803522	NM_029394.3	Snx24	NP_083670.1	ILMN_2623064	001240095	S	1644	GGGGTAGAGTGCGTATGTCCTACCTGTGTGTAAATGCTGATGAACAGCCT	18	+	53550241-53550290	18qD1	Mus musculus sorting nexing 24 (Snx24), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810011K15Rik; AI451341; 5730433I16Rik	2810011K15Rik; AI451341; 5730433I16Rik
Mus musculus	RefSeq	ILMN_211266	ILMN_237563	OLFR960	NM_146279.1	NM_146279.1		258276	22129724	NM_146279.1	Olfr960	NP_666391.1	ILMN_2614140	005890239	S	282	CCAGGGATGTGTTGTACAACATTTCTTCTATCATTGTATTGGATGCGTTT	9	+	39430991-39431040	9qA5.1	Mus musculus olfactory receptor 960 (Olfr960), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR224-12	MOR224-12
Mus musculus	RefSeq	ILMN_237563	ILMN_237563	OLFR960	NM_146279.1	NM_146279.1		258276	22129724	NM_146279.1	Olfr960	NP_666391.1	ILMN_2913026	006290603	S	824	TCAACAATCTTGTGACACCCACCATCAACCCATTGATCTACAGCCTGAGG	9	+	39431533-39431582	9qA5.1	Mus musculus olfactory receptor 960 (Olfr960), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR224-12	MOR224-12
Mus musculus	RefSeq	ILMN_222729	ILMN_222729	DCDC2A	NM_177577.2	NM_177577.2		195208	31341463	NM_177577.2	Dcdc2a	NP_808245.1	ILMN_1256439	002060022	S	2254	CTTTTGAAAAAATTCTCAACGCTAGCCTAGGTCTAATAGAATCAAGGTGT	13	+	25213301-25213350	13qA3.1	Mus musculus doublecortin domain containing 2a (Dcdc2a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Dcdc2; MGC54817; RU2	Dcdc2; MGC54817; RU2
Mus musculus	RefSeq	ILMN_215829	ILMN_215829	MRPL15	NM_025300.2	NM_025300.2		27395	34328269	NM_025300.2	Mrpl15	NP_079576.1	ILMN_1239507	002710722	S	1815	GAGGCAGAAACATAGCACCCAAGTCTGAAACAATTGGCACCAGTCTTCCC	1	-	4763316-4763365	1qA1	Mus musculus mitochondrial ribosomal protein L15 (Mrpl15), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]; The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome [goid 2] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	MRP-L7; HSPC145; Rpml7	MRP-L7; HSPC145; Rpml7
Mus musculus	MEEBO	ILMN_222777	ILMN_222777	4930441O14RIK	scl44661.4_169	NM_026649.1			13386137	NM_026649.1	4930441O14Rik		ILMN_2754579	003830044	S	2059	AACTCATTGCAAGAAAGGGGCTGGACTGACACCACGGAGTGATGGGACTC										
Mus musculus	MEEBO	ILMN_195390	ILMN_195390	IGHV13S1_X55935_IG_HEAVY_VARIABLE_13S1_128	IGHV13S1_X55935_Ig_heavy_variable_13S1_128						IGHV13S1_X55935_Ig_heavy_variable_13S1_128		ILMN_2515178	007330138	S	2	AGGCTGGAGTGGATTGCTGTAATTACAGTCAAATCTGATAATTATGGAGC										
Mus musculus	MEEBO	ILMN_209503	ILMN_209503	A430079E08	scl29345.1.6_288	NM_175018.2			31341334	NM_175018.2	A430079E08		ILMN_2596421	004780717	S	665	GGCTGTTTGGGTAGATGGGAGATGTATGCTCAAAAACCAGCAAGTCTGGG										
Mus musculus	RefSeq	ILMN_233456	ILMN_233456	TMEM201	NM_001025106.1	NM_001025106.1		230917	68342031	NM_001025106.1	Tmem201	NP_001020277.1	ILMN_3068535	001980608	I	4442	GTCCCTCAGCATCCTTGTCTCCAGCCCTGAGGAAACACCTAAAGAGAAGC	4	-	149089621-149089670	4qE2	Mus musculus transmembrane protein 201 (Tmem201), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9430091K04; AV028368	9430091K04; AV028368
Mus musculus	RefSeq	ILMN_194482	ILMN_233456	TMEM201	NM_001025106.1	NM_001025106.1		230917	68342031	NM_001025106.1	Tmem201	NP_001020277.1	ILMN_1250036	005910367	S	4516	CTGGCACCCTGCGCACCCAGGAGGGCCTTTTATGTTTTGATTCATATATA	4	-	149089547-149089596	4qE2	Mus musculus transmembrane protein 201 (Tmem201), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9430091K04; AV028368	9430091K04; AV028368
Mus musculus	RefSeq	ILMN_233456	ILMN_233456	TMEM201	NM_001025106.1	NM_001025106.1		230917	68342031	NM_001025106.1	Tmem201	NP_001020277.1	ILMN_3146839	003360524	A	1076	TCTGGGCCCTGCTGCTGGGGCTGCACCTGGCAGAGCATTATCTACAGGCT	4	-	149101457-149101506	4qE2	Mus musculus transmembrane protein 201 (Tmem201), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9430091K04; AV028368	9430091K04; AV028368
Mus musculus	Riken	ILMN_206172	ILMN_206172	D430034L19RIK	ri|D430034L19|PX00194P08|AK085083|887					AK085083	D430034L19Rik		ILMN_1240292	007400543	S	718	CAGCATGGTACTCGTTCAAAGACAGACATGCAGATCAGTGACCTAGAACT										
Mus musculus	RefSeq	ILMN_198862	ILMN_198862	LOC330731	XM_282816.2	XM_282816.2			38089170	XM_282816.2	LOC330731		ILMN_1260416	006060689	S	2058	CTCTCCCCATGCAGAAACAGAACTGGCAAAATACTGGGCCCAGAGATACC										
Mus musculus	MEEBO	ILMN_193091	ILMN_193091	EHD4	scl18792.9_126				31981591	NM_133838	Ehd4		ILMN_2494023	005080184	S	5	CGTGAGTCTGTCTCTAAAATGCGTCCGTATGTTCAATGTAGATATGGCCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_209350	ILMN_209350	STYX	scl46424.15.1_1	XM_127679.1			20873601	XM_127679.1	Styx		ILMN_1253788	004850356	S	1247	TAAAACCCTGACATTCTGGAGATGACCCTTGCCTGCCACCACCAAGCGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_214439	ILMN_214439	2010309E21RIK	scl066488.1_275	XM_357858.1			38089100	XM_357858.1	2010309E21Rik		ILMN_2648047	007100739	S	440	GCTAGACAGATGTGTGGCCAAGTGTGTGGATGACCATATGCACCTCATCC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]				
Mus musculus	MEEBO	ILMN_212976	ILMN_212976	BFAR	scl0001807.1_51				21313129	NM_025976	Bfar		ILMN_1236693	002630215	S	680	TGGTGCACAAGGCTGTAGATAAGTGGACGACGGAAGAAGTTGTCCTCTGG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_203417	ILMN_203417	SMUG1	ri|B230114N06|PX00068N03|AK045411|3753					AK045411	Smug1		ILMN_1236173	006270435	S	1620	CACAGTGGGAAACACTGGAGGAAAGTGGACAGAGGCAAACCACAGGGCAG						A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence ISS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases present in single-stranded DNA [goid 17065] [evidence ISS]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence ISA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence ISA]; Catalysis of the removal of oxidized bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 702] [evidence ISA]		
Mus musculus	MEEBO	ILMN_210261	ILMN_210261	4930563I02RIK	scl46227.3.64_53				51768471	XM_484382	4930563I02Rik		ILMN_1233602	000840594	S	874	GACAGTGATGCGTCCGGATTTCTTATTTCTGTCAACACTTACTGGATTCT										
Mus musculus	RefSeq	ILMN_214517	ILMN_214517	ASF1A	NM_025541.3	NM_025541.3		66403	77020275	NM_025541.3	Asf1a	NP_079817.1	ILMN_1239345	000160736	S	1650	CGAAGCATGTCTTACCATTTGCAGTTGTATTACCCCATATCCTCTGGCTC	10	+	53328489-53328538	10qB3	Mus musculus ASF1 anti-silencing function 1 homolog A (S. cerevisiae) (Asf1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence ISO]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence ISO]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence ISO]	C79052; 2310079C17Rik	C79052; 2310079C17Rik
Mus musculus	RefSeq	ILMN_184129	ILMN_214517	ASF1A	NM_025541.3	NM_025541.3		66403	77020275	NM_025541.3	Asf1a	NP_079817.1	ILMN_1220068	004040634	S	2042	GCAAGAAATATATACAACTTAAAAGAGTCTGTTTAGACAAATGCCCTTTC	10	+	53328881-53328930	10qB3	Mus musculus ASF1 anti-silencing function 1 homolog A (S. cerevisiae) (Asf1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence ISO]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence ISO]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence ISO]	C79052; 2310079C17Rik	C79052; 2310079C17Rik
Mus musculus	RefSeq	ILMN_211467	ILMN_211467	OLFR114	NM_146287.1	NM_146287.1		258284	22129714	NM_146287.1	Olfr114	NP_666399.1	ILMN_2616202	001260154	S	876	GAGAAATGATGCCATAAAGAGTGTTGTAAGGAAGTTACTGTTGAGTAGAA	17	-	37733897-37733946	17qB1	Mus musculus olfactory receptor 114 (Olfr114), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR218-10	MOR218-10
Mus musculus	MEEBO	ILMN_194445	ILMN_194445	221973_54	221973_54						221973_54		ILMN_2506479	000070615	S	3	GACATCGTTGTGTACTGCAATGGGCAGAGAAAAGTAATATTGACAAAAAC										
Mus musculus	MEEBO	ILMN_212000	ILMN_212000	CSNK	scl012994.5_66	NM_007786.1			6681060	NM_007786.1	Csnk		ILMN_2621622	006840259	S	690	CAGATTCAGATCTTTCTCGTCTTCCCTTACCTTTTACATTAACATCACAG										
Mus musculus	MEEBO	ILMN_187321	ILMN_187321	ZFP287	scl00170740.2_233	NM_133208.1			21362278	NM_133208.1	Zfp287		ILMN_2462265	005860301	S	10	ATAAAATCAACCGTACACACCACCTAGATTTTAAAGTTAATATTTTACCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42035] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210875	ILMN_210875	MYLC2B	NM_023402.1	NM_023402.1		67938	21728375	NM_023402.1	Mylc2b	NP_075891.1	ILMN_2953531	000870470	S	850	CCACTGTGAAAGCCCAGGACAATATATCCGGATTTCTGGTTTTGCTGGAT	17	-	70878859-70878908	17qE1.3	Mus musculus myosin light chain, regulatory B (Mylc2b), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	C77744; 1500001M02Rik; RLC-B	C77744; 1500001M02Rik; RLC-B
Mus musculus	RefSeq	ILMN_210875	ILMN_210875	MYLC2B	NM_023402.1	NM_023402.1		67938	21728375	NM_023402.1	Mylc2b	NP_075891.1	ILMN_2710185	003610100	S	61	ATGTCGAGCAAAAAAGCGAAGACCAAGACCACCAAGAAGCGCCCTCAGCG	17	-	70882037-70882086	17qE1.3	Mus musculus myosin light chain, regulatory B (Mylc2b), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	C77744; 1500001M02Rik; RLC-B	C77744; 1500001M02Rik; RLC-B
Mus musculus	RefSeq	ILMN_210875	ILMN_210875	MYLC2B	NM_023402.1	NM_023402.1		67938	21728375	NM_023402.1	Mylc2b	NP_075891.1	ILMN_2710186	006100021	S	63	GTCGAGCAAAAAAGCGAAGACCAAGACCACCAAGAAGCGCCCTCAGCGCG	17	-	70882035-70882084	17qE1.3	Mus musculus myosin light chain, regulatory B (Mylc2b), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	C77744; 1500001M02Rik; RLC-B	C77744; 1500001M02Rik; RLC-B
Mus musculus	RefSeq	ILMN_215631	ILMN_234696	6230427J02RIK	NM_026597.2	NM_026597.2		68176	141802918	NM_026597.2	6230427J02Rik	NP_080873.1	ILMN_2661799	001570408	S	337	GGCTTGGTAGCAGAAGACAAGGGTTTACCCTTGGGATGTCCTAGGGAGCA	9	-	107887192-107887241	9qF2	Mus musculus RIKEN cDNA 6230427J02 gene (6230427J02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201528	ILMN_201528	ST6GALNAC2	NM_009180.3	NM_009180.3		20446	114842375	NM_009180.3	St6galnac2	NP_033206.2	ILMN_2940642	006620161	S	1933	ACGAGTCTCACTGGAGAGGCACATCAGTCCTTGTCACCAACAGGAAACTG	11	-	116538069-116538118	11qE2	Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 (St6galnac2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]	Siat7b; Siat7	Siat7b; Siat7
Mus musculus	Riken	ILMN_204168	ILMN_204168	SLC4A8	ri|C820018O19|PX00088I19|AK050563|1840					AK050563	Slc4a8		ILMN_2562901	005670358	S	1520	CCCGAGCACTCATGTGGTGGCTGGCCAGAGTTTGATATCTGGTATTCACC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA];  [goid 15380] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 5452] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216775	ILMN_254713	MCART1	NM_001009949.1	NM_001009949.1		230125	57977298	NM_001009949.1	Mcart1	NP_001009949.1	ILMN_2675239	003870278	S	2049	GATCCAACTGGCAGGAACCAGGCCAAGGAGTCACATAGCTATTTTCTGGG	4	-	45411029-45411078	4qB1	Mus musculus mitochondrial carrier triple repeat 1 (Mcart1), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Gm138; MGC115765; D130005A03Rik	Gm138; MGC115765; D130005A03Rik
Mus musculus	Riken	ILMN_204445	ILMN_204445	A730089E01RIK	ri|A730089E01|PX00152J02|AK043369|1250					AK043369	A730089E01Rik		ILMN_1246115	003120209	S	1060	TTTGACTCCATTCTCCAAGAGCAGATGGGCAAACAGGCTCTGAGCGGCTG										
Mus musculus	RefSeq	ILMN_232532	ILMN_232532	EG622339	NM_001081297.1	NM_001081297.1		622339	124486830	NM_001081297.1	EG622339	NP_001074766.1	ILMN_3006990	007200403	S	756	ACCCGAAATGTGTCTGTTGTGGATCTGACGTGCCGCCTGGAGAAACACGC	12	-	71021708-71021757	12qC2	Mus musculus predicted gene, EG622339 (EG622339), mRNA.					
Mus musculus	MEEBO	ILMN_186425	ILMN_186425	1700027M01RIK	scl23587.2.1_135				31541832	NM_023544	1700027M01Rik		ILMN_2435450	000780121	S	8	CGACGTCAGTTGCTGTTTGTGCTGGTTAGAACTGTCTGCAGCCGAACGCG										
Mus musculus	MEEBO	ILMN_186425	ILMN_186425	1700027M01RIK	scl23587.2.1_135				31541832	NM_023544	1700027M01Rik		ILMN_2435451	001010356	S	9	GACGTCAGTTGCTGTTTGTGCTGGTTAGAACTGTCTGCAGCCGAACGCGC										
Mus musculus	RefSeq	ILMN_212706	ILMN_212706	RHOQ	NM_145491.2	NM_145491.2		104215	34328360	NM_145491.2	Rhoq	NP_663466.2	ILMN_2629395	002480092	S	3945	AGTTACTTTAGACACTGCTTCCGTTTGATTTTTAATTATTGGTTTTAAAT	17	+	87399232-87399281	17qE4	Mus musculus ras homolog gene family, member Q (Rhoq), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	TC10A; Tc10; Arhq	TC10A; Tc10; Arhq
Mus musculus	RefSeq	ILMN_222320	ILMN_212706	RHOQ	NM_145491.2	NM_145491.2		104215	34328360	NM_145491.2	Rhoq	NP_663466.2	ILMN_1219939	002230228	S	1463	GGGCTGTGCAGAAGTTACATGGTCCAAGCCGGGCAGTCCATTTACAGCAC	17	+	87396750-87396799	17qE4	Mus musculus ras homolog gene family, member Q (Rhoq), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	TC10A; Tc10; Arhq	TC10A; Tc10; Arhq
Mus musculus	RefSeq	ILMN_218798	ILMN_218798	DENND5B	NM_177192.3	NM_177192.3		320560	145580622	NM_177192.3	Dennd5b	NP_796166.2	ILMN_2700354	002690348	S	2683	GCTTGGAAGAAAACACCTTGATCGCCAGCCTGTGTGACCTACTGGAGAGG				6qG3	Mus musculus DENN/MADD domain containing 5B (Dennd5b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9330160C06Rik	9330160C06Rik
Mus musculus	RefSeq	ILMN_221061	ILMN_221061	SGPL1	NM_009163.2	NM_009163.2		20397	31543693	NM_009163.2	Sgpl1	NP_033189.2	ILMN_2936380	006510348	S	3779	AGTCAGTGACAGGGGTGGGTAGGGTGTCTAGTATCATGGTATCACGTGGC	10	-	60561618-60561667	10qB4	Mus musculus sphingosine phosphate lyase 1 (Sgpl1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: sphinganine 1-phosphate = phosphoethanolamine + palmitaldehyde [goid 8117] [evidence IEA]	Spl; AI428538; D10Xrf456	Spl; AI428538; D10Xrf456
Mus musculus	RefSeq	ILMN_221061	ILMN_221061	SGPL1	NM_009163.2	NM_009163.2		20397	31543693	NM_009163.2	Sgpl1	NP_033189.2	ILMN_1245609	007380138	S	3595	GGAGAAGCATCCTTTATAGTCTCAGCAGAGCCAGGGACCAAGCCGCTCCC	10	-	60561802-60561851	10qB4	Mus musculus sphingosine phosphate lyase 1 (Sgpl1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: sphinganine 1-phosphate = phosphoethanolamine + palmitaldehyde [goid 8117] [evidence IEA]	Spl; AI428538; D10Xrf456	Spl; AI428538; D10Xrf456
Mus musculus	RefSeq	ILMN_199461	ILMN_199461	LOC382588	XM_356582.1	XM_356582.1			38049469	XM_356582.1	LOC382588		ILMN_1224057	004010370	S	5	GTACTTTGCGGATGGCGTCTGACTTACAGGACAGTGGGTGGAGCTCAGAG										
Mus musculus	MEEBO	ILMN_186670	ILMN_186670	OXTR	scl018430.1_62				51716983	XM_144956	Oxtr		ILMN_2543061	006580564	S	752	CTGGCCGTGCGGCGTTGGCACGGGTCAGTAGTGTCAAGCTTATCTCCAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which the force of blood traveling through the circulatory system is increased [goid 45777] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]; Combining with oxytocin to initiate a change in cell activity [goid 4990] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219818	ILMN_219818	ST3GAL5	NM_011375.2	NM_011375.2		20454	78126168	NM_011375.2	St3gal5	NP_035505.2	ILMN_3116560	001110301	A	2143	AGCTGAGCGCCGTGATGTTGCCCCAGGGTGGAAGAAGCCACACTTCCTAC	6	+	72104259-72104308	6qC1	Mus musculus ST3 beta-galactoside alpha-2,3-sialyltransferase 5 (St3gal5), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: cytolipin-H + CMP-N-acetylneuraminate = alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide + CMP. Alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide is also known as GM3 [goid 47291] [evidence IEA]	Siat9; 3S-T; [a]2	Siat9; 3S-T; [a]2
Mus musculus	RefSeq	ILMN_212389	ILMN_212389	SEPT6	NM_019942.2	NM_019942.2		56526	31560369	NM_019942.2	Sept6	NP_064326.2	ILMN_2992517	002680370	S	1945	CCACACAAACTTCCAAGGGGCTTTGCAGGTTTCGCAAGAGGTTTCTATTC	X	-	33344034-33344083	XqA3.3	Mus musculus septin 6 (Sept6), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810035H17Rik; C920001C06Rik; Sep6; mKIAA0128; KIAA0128	2810035H17Rik; C920001C06Rik; Sep6; mKIAA0128; KIAA0128
Mus musculus	RefSeq	ILMN_217435	ILMN_217435	BTD	NM_025295.3	NM_025295.3		26363	146134962	NM_025295.3	Btd	NP_079571.1	ILMN_1252698	001510521	S	1503	CTTTCCTTTATTTCTCACCTCGGGGATGACTCTGGACACCCCTGACCAGC				14qB	Mus musculus biotinidase (Btd), mRNA.	The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the reaction: biotin amide + H2O = biotin + NH3 [goid 47708] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217215	ILMN_217215	SEMA6D	NM_172537.2	NM_172537.2		214968	40385868	NM_172537.2	Sema6d	NP_766125.2	ILMN_2680415	006510270	S	5295	TGCAGCCAGCACCTGAGGACTTCTTATACAGTCATAAAGCCACCTAGAGC	2	+	124492485-124492534	2qF1	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D (Sema6d), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Sema6D-6; Sema6D-5; Sema6D-2; 1110067B02Rik; AA409156; Sema6D-4; D330011G23; Sema6D-1; mKIAA1479	Sema6D-6; Sema6D-5; Sema6D-2; 1110067B02Rik; AA409156; Sema6D-4; D330011G23; Sema6D-1; mKIAA1479
Mus musculus	RefSeq	ILMN_238511	ILMN_217215	SEMA6D	NM_172537.2	NM_172537.2		214968	40385868	NM_172537.2	Sema6d	NP_766125.2	ILMN_3163428	000580017	A	3735	TGGCACCCTCCCCAGGACGGGACTAAAGAGGACACCATCCTTAAAACCTG	2	+	124490925-124490974	2qF1	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D (Sema6d), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Sema6D-6; Sema6D-5; Sema6D-2; 1110067B02Rik; AA409156; Sema6D-4; D330011G23; Sema6D-1; mKIAA1479	Sema6D-6; Sema6D-5; Sema6D-2; 1110067B02Rik; AA409156; Sema6D-4; D330011G23; Sema6D-1; mKIAA1479
Mus musculus	RefSeq	ILMN_217215	ILMN_217215	SEMA6D	NM_172537.2	NM_172537.2		214968	40385868	NM_172537.2	Sema6d	NP_766125.2	ILMN_1258953	004570703	S	6240	GGATGTGTAAATAATATGTACTTTGGGTTTTTAACACCGCATGTAAAGTC	2	+	124493430-124493479	2qF1	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D (Sema6d), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Sema6D-6; Sema6D-5; Sema6D-2; 1110067B02Rik; AA409156; Sema6D-4; D330011G23; Sema6D-1; mKIAA1479	Sema6D-6; Sema6D-5; Sema6D-2; 1110067B02Rik; AA409156; Sema6D-4; D330011G23; Sema6D-1; mKIAA1479
Mus musculus	RefSeq	ILMN_200645	ILMN_200645	LOC383414	XM_357040.1	XM_357040.1			38084673	XM_357040.1	LOC383414		ILMN_1216810	007610653	S	520	CGGGTCACAGTGTCCTTCATACGAACAATCCAGGTGAGTCCTCAAGTGTT										
Mus musculus	RefSeq	ILMN_231776	ILMN_231776	1700084C01RIK	NM_001033185.1	NM_001033185.1		78465	85701697	NM_001033185.1	1700084C01Rik	NP_001028357.1	ILMN_2862026	006220113	S	1276	CCGAAGCTCTGCGATGCTTAGAGTGCCACCTGCTGGTCAAATGGCATAGC	1	+	171771164-171771213	1qH3	Mus musculus RIKEN cDNA 1700084C01 gene (1700084C01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209359	ILMN_209359	ASB7	NM_178236.2	NM_178236.2		117589	31342356	NM_178236.2	Asb7	NP_839954.1	ILMN_1251415	001820142	S	1396	GCGCATCTGCAGATATGTTTCAGACGGACATCAAATCCCATTGGACCTGC	7	-	66556664-66556713	7qC	Mus musculus ankyrin repeat and SOCS box-containing protein 7 (Asb7), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Asb-7; AI449039; D030055C23Rik	Asb-7; AI449039; D030055C23Rik
Mus musculus	RefSeq	ILMN_209761	ILMN_209761	ATP5B	NM_016774.3	NM_016774.3		11947	133892441	NM_016774.3	Atp5b	NP_058054.2	ILMN_2598972	001470600	S	1602	GGGTCGTGAGGGACTCCAGCCAAAGGCAGCACTGCAACTGATCTCTCCAT	10	+	127527167-127527175:127527176-127527216	10qD3	Mus musculus ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit (Atp5b), nuclear gene encoding mitochondrial protein, mRNA.	The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled [goid 45261] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The disassembly of adhesions at the front and rear of a migrating cell. At the leading edge, adhesion disassembly accompanies the formation of new protrusions; at the cell rear, it promotes tail retraction [goid 6933] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217733	ILMN_233212	CMKLR1	NM_008153.2	NM_008153.2		14747	71896663	NM_008153.2	Cmklr1	NP_032179.1	ILMN_2774056	002630131	S	1741	CCATTGCAGACCTGTTATGGCAACATGACAGTCAAACCAACAAAGCCCAC	5	-	114063418-114063467	5qF	Mus musculus chemokine-like receptor 1 (Cmklr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with anaphylatoxin C5a to initiate a change in cell activity [goid 4944] [evidence IEA]	mcmklr1; DEZ; Gpcr27	mcmklr1; DEZ; Gpcr27
Mus musculus	MEEBO	ILMN_186598	ILMN_186598	DHRSX	scl00236082.1_18				51784026	XM_135485	Dhrsx		ILMN_2436890	002490605	S	14	AGCCACTTTTTGGCCGCTGTGACGCCTGTGACCTCGTGTGACCCTAGATG							The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_249029	ILMN_249029	2210418O10RIK	NM_029813.2	NM_029813.2		76958	124430571	NM_029813.2	2210418O10Rik	NP_084089.2	ILMN_3129372	003850187	A	310	TCACTCAGGAAGAGTGGGCTTTGCTGGATCCTTCTCAGAAGAGTCTCTAT					Mus musculus RIKEN cDNA 2210418O10 gene (2210418O10Rik), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC116027; C230069C04	MGC116027; C230069C04
Mus musculus	RefSeq	ILMN_193063	ILMN_309882	1700021K14RIK	XM_001475204.1	XM_001475204.1		69398	149260282	XM_001475204.1	1700021K14Rik	XP_001475254.1	ILMN_1224436	005220131	S	882	CACAGTCAAGACTGGGACCTCAACAGTCACCGATCAGGTTCATGTACCAT				9qF2	PREDICTED: Mus musculus RIKEN cDNA 1700021K14 gene (1700021K14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222158	ILMN_222158	MYLPF	NM_016754.3	NM_016754.3		17907	32129291	NM_016754.3	Mylpf	NP_058034.1	ILMN_2977331	000130349	S	180	GGGCAGGAGCGGAAGGGAGCTCCAACGTCTTCTCCATGTTTGACCAGACT	7	+	127004032-127004081	7qF3	Mus musculus myosin light chain, phosphorylatable, fast skeletal muscle (Mylpf), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence IMP]	2410014J02Rik; Mlc2; MLC-2	2410014J02Rik; Mlc2; MLC-2
Mus musculus	RefSeq	ILMN_222158	ILMN_222158	MYLPF	NM_016754.3	NM_016754.3		17907	32129291	NM_016754.3	Mylpf	NP_058034.1	ILMN_2745496	006770615	S	594	GGGCGGCAACGTGGACTACAAGAACATCTGCTACGTCATCACACATGGTG	7	+	127005274-127005323	7qF3	Mus musculus myosin light chain, phosphorylatable, fast skeletal muscle (Mylpf), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence IMP]	2410014J02Rik; Mlc2; MLC-2	2410014J02Rik; Mlc2; MLC-2
Mus musculus	MEEBO	ILMN_184561	ILMN_184561	MTDNA_ND4L	mtDNA_ND4L						mtDNA_ND4L		ILMN_2419660	002680520	S	18	GTTTCAAACACGTACGGAACAGATTACGTCCAAAATCTCAACCTACTACA										
Mus musculus	RefSeq	ILMN_212255	ILMN_212255	OLFR76	NM_146682.1	NM_146682.1		258677	33239079	NM_146682.1	Olfr76	NP_666893.1	ILMN_1224313	003460692	S	628	GGTGGGACGTCATTTCTCATCCTGCTGATCTCCTACAGTTACATAGTGTC	19	-	12194487-12194536	19qA	Mus musculus olfactory receptor 76 (Olfr76), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence TAS]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR215-3; V5	MOR215-3; V5
Mus musculus	RefSeq	ILMN_212255	ILMN_212255	OLFR76	NM_146682.1	NM_146682.1		258677	33239079	NM_146682.1	Olfr76	NP_666893.1	ILMN_1213856	001110561	S	616	GTGATCACAGTAGGTGGGACGTCATTTCTCATCCTGCTGATCTCCTACAG	19	-	12194499-12194548	19qA	Mus musculus olfactory receptor 76 (Olfr76), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence TAS]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR215-3; V5	MOR215-3; V5
Mus musculus	RefSeq	ILMN_212607	ILMN_212607	TAF11	NM_026836.1	NM_026836.1		68776	30794435	NM_026836.1	Taf11	NP_081112.1	ILMN_2946281	006660189	S	553	GAAGAAGCCCTGGACGTGTGTGAGAAATGGGGAGAAACGCCACCCCTGCA	17	-	27629334-27629378:27630117-27630121	17qA3.3	Mus musculus TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AW552398; AL024207; AI115401; TAF2I; PRO214; 1110038O14Rik; TAFII28; 28kDa	AW552398; AL024207; AI115401; TAF2I; PRO214; 1110038O14Rik; TAFII28; 28kDa
Mus musculus	RefSeq	ILMN_212560	ILMN_212560	IQCB1	NM_177128.3	NM_177128.3		320299	142377605	NM_177128.3	Iqcb1	NP_796102.1	ILMN_2635348	007400735	S	2127	TTCCCCTGTCTCTATGCCCTGTCTGTGAGCTTTAATTGTGGGAGAGAACT	16	+	36872669-36872718	16qB3	Mus musculus IQ calmodulin-binding motif containing 1 (Iqcb1), mRNA.	A 9+0 cilium that forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments [goid 32391] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence ISS]; The process by which the identity of an organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized [goid 48496] [evidence ISS]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence ISS]	6820449I09Rik; AV128382	6820449I09Rik; AV128382
Mus musculus	RefSeq	ILMN_212560	ILMN_212560	IQCB1	NM_177128.3	NM_177128.3		320299	142377605	NM_177128.3	Iqcb1	NP_796102.1	ILMN_1252447	002000068	S	1319	GGGAAATGGAAGAGAAATCAGCATTGACTATTCAGAAACATTGGAGGGGG	16	+	36858562-36858611	16qB3	Mus musculus IQ calmodulin-binding motif containing 1 (Iqcb1), mRNA.	A 9+0 cilium that forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments [goid 32391] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence ISS]; The process by which the identity of an organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized [goid 48496] [evidence ISS]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence ISS]	6820449I09Rik; AV128382	6820449I09Rik; AV128382
Mus musculus	RefSeq	ILMN_211372	ILMN_211372	ACAD8	NM_025862.2	NM_025862.2		66948	118403321	NM_025862.2	Acad8	NP_080138.2	ILMN_2615170	001470014	S	337	GATCTGGACTGTCTCGCCTTGATACTTCTGTCATCTTTGAAGCCTTGGCC	9	-	26798865-26798914	9qA4	Mus musculus acyl-Coenzyme A dehydrogenase family, member 8 (Acad8), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9083] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	2310016C19Rik; AI786953	2310016C19Rik; AI786953
Mus musculus	RefSeq	ILMN_211372	ILMN_211372	ACAD8	NM_025862.2	NM_025862.2		66948	118403321	NM_025862.2	Acad8	NP_080138.2	ILMN_2636064	002600142	S	2640	CATTAAAGTTTGCCTTTTAGTTAATTTCAGCTAAAATCATTGCAGTTAAA	9	-	26781898-26781947	9qA4	Mus musculus acyl-Coenzyme A dehydrogenase family, member 8 (Acad8), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9083] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	2310016C19Rik; AI786953	2310016C19Rik; AI786953
Mus musculus	RefSeq	ILMN_211372	ILMN_211372	ACAD8	NM_025862.2	NM_025862.2		66948	118403321	NM_025862.2	Acad8	NP_080138.2	ILMN_2754690	003990066	S	456	GGAAATGAGGAACAGAGGCACAAATTTTGCCCACCGCTCTGTACCATGGA	9	-	26798199-26798248	9qA4	Mus musculus acyl-Coenzyme A dehydrogenase family, member 8 (Acad8), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9083] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	2310016C19Rik; AI786953	2310016C19Rik; AI786953
Mus musculus	RefSeq	ILMN_228492	ILMN_228492	RFXANK	NM_001025589.1	NM_001025589.1		19727	70980522	NM_001025589.1	Rfxank	NP_001020760.1	ILMN_3125181	006220484	A	3301	GATGCAGCTTGGGAGCCCTGCACCCCATTGCCTTCCAAAGAGGCCAAAAT	8	-	72655006-72655055	8qB3.3	Mus musculus regulatory factor X-associated ankyrin-containing protein (Rfxank), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Tvl1	Tvl1
Mus musculus	RefSeq	ILMN_189652	ILMN_189652	V1RG5	NM_134206.1	NM_134206.1		171240	21717734	NM_134206.1	V1rg5	NP_598967.1	ILMN_2838831	006860719	S	856	CTCATCAGCAGCATGAAGTCTAGGTCCAGCATACTTTTGCCTTGCTTTGG	7	+	12432979-12433028	7qA1	Mus musculus vomeronasal 1 receptor, G5 (V1rg5), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	MEEBO	ILMN_211811	ILMN_211811	D930036B08RIK	scl0002204.1_11	NM_198649.1			38348533	NM_198649.1	D930036B08Rik		ILMN_1228600	006660735	S	3925	TCTGCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAA										
Mus musculus	MEEBO	ILMN_211811	ILMN_211811	D930036B08RIK	scl0002204.1_11	NM_198649.1			38348533	NM_198649.1	D930036B08Rik		ILMN_2666155	004230132	S	3928	GCACATTGGAAGGGTGACGGGGCGGAGGGACTGCAAGGGACGTTTAATGT										
Mus musculus	RefSeq	ILMN_216014	ILMN_216014	VEZT	NM_172538.4	NM_172538.4		215008	146149316	NM_172538.4	Vezt	NP_766126.2	ILMN_2666347	003060438	S	4344	AGATTTCAGACCGTGACGCGACTTGTACTGGTGATGCCAGCACCCCAGGT				10qC2	Mus musculus vezatin, adherens junctions transmembrane protein (Vezt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching [goid 43009] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		AI854408; 6330418D12; vezatin	AI854408; 6330418D12; vezatin
Mus musculus	RefSeq	ILMN_216014	ILMN_216014	VEZT	NM_172538.4	NM_172538.4		215008	146149316	NM_172538.4	Vezt	NP_766126.2	ILMN_2672204	001850482	S	2802	GTCATGTTAATACATTGTTCGTACTTTATTTTGTTTATACCACTCGTAAA				10qC2	Mus musculus vezatin, adherens junctions transmembrane protein (Vezt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching [goid 43009] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		AI854408; 6330418D12; vezatin	AI854408; 6330418D12; vezatin
Mus musculus	MEEBO	ILMN_194185	ILMN_194185	SCL0003231.1_13	scl0003231.1_13	AK006784.1			12840035	AK006784.1	scl0003231.1_13		ILMN_1234313	004890484	S	15	GGGGACCAAAGAAGGCCTAGTTTGCCCGCCCTGCATTTTATCAAAGGGGC										
Mus musculus	RefSeq	ILMN_210577	ILMN_210577	CDK3	NM_027165.2	NM_027165.2		69681	142369976	NM_027165.2	Cdk3	NP_081441.1	ILMN_2607040	002490500	S	963	ACAGTAGGTGTCAGGTTAGATAAGAGACCCTAGCCCTTCGCCTTCACTGC	11	+	116081312-116081361	11qE2	Mus musculus cyclin-dependent kinase 3 (Cdk3), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310050O10Rik	2310050O10Rik
Mus musculus	RefSeq	ILMN_223965	ILMN_252552	MRTO4	NM_023536.2	NM_023536.2		69902	118130329	NM_023536.2	Mrto4	NP_076025.1	ILMN_2772380	003450114	S	521	TGAAGTATGCAAAGAGGGTGATGTGCTGACCCCAGAGCAGGCCCGTATCC	4	-	138903837-138903886	4qD3	Mus musculus MRT4, mRNA turnover 4, homolog (S. cerevisiae) (Mrto4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		Mrt4; Mg684; 2610012O22Rik	Mrt4; Mg684; 2610012O22Rik
Mus musculus	MEEBO	ILMN_220591	ILMN_220591	4930412M03RIK	scl40149.1_22	NM_177098.2			31342801	NM_177098.2	4930412M03Rik		ILMN_1223629	007200093	S	867	GCAAGGCTTGTTGAGCCCTTACAGTACTATAGATGTCTTGGCCAGCTGGT										
Mus musculus	RefSeq	ILMN_198154	ILMN_198154	LOC381093	XM_358505.1	XM_358505.1			38082189	XM_358505.1	LOC381093		ILMN_2530674	006560324	S	241	GGTTCCTCAGTTTCAGGACCGAAGGACCCTGGGCCACCACCTTCTTTCCT										
Mus musculus	RefSeq	ILMN_248588	ILMN_248588	PPP2R1B	NM_028614.2	NM_028614.2		73699	77539775	NM_028614.2	Ppp2r1b	NP_082890.2	ILMN_3090530	002940037	A	1294	CTCTCCTTCCGGCCATAGTGGAACTGGCTGAAGATGCCAAGTGGAGGGTC	9	+	50678247-50678296	9qA5.3	Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform (Ppp2r1b), transcript variant 2, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI790395; 2410091N08Rik	AI790395; 2410091N08Rik
Mus musculus	RefSeq	ILMN_222796	ILMN_222796	2010107E04RIK	NM_027360.2	NM_027360.2		70257	142387144	NM_027360.2	2010107E04Rik	NP_081636.1	ILMN_1239677	005550543	S	215	CCCATGGCCATCACTAACTGCTCCGAATCCACAAGATGAAGACGTCGGCT	12	-	113199687-113199720:113199721-113199736	12qF1	Mus musculus RIKEN cDNA 2010107E04 gene (2010107E04Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			9430003J03Rik; AU043134; AV124504	9430003J03Rik; AU043134; AV124504
Mus musculus	RefSeq	ILMN_222007	ILMN_222007	LBXCOR1	NM_172446.2	NM_172446.2		207667	142383959	NM_172446.2	Lbxcor1	NP_766034.1	ILMN_1252868	004780041	S	3248	CCCGAGTAGGGCCTGGGACCCCGAATGTGAATATAACGTAGCATCTTCGC	9	-	62986342-62986391	9qC	Mus musculus ladybird homeobox 1 homolog (Drosophila) corepressor 1 (Lbxcor1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	AV273001; 4931440A04; C230094B15Rik; Corl1	AV273001; 4931440A04; C230094B15Rik; Corl1
Mus musculus	MEEBO	ILMN_210249	ILMN_210249	BIRC5	scl0011799.1_42	NM_009689.1			6753089	NM_009689.1	Birc5		ILMN_2681241	007400215	S	143	GTACCTCAAGAACTACCGCATCGCCACCTTCAAGAACTGGCCCTTCCTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence RCA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA];  [goid 4869] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_245127	ILMN_245127	2010107G12RIK	NM_001025573.1	NM_001025573.1		243753	85701583	NM_001025573.1	2010107G12Rik	NP_001020744.1	ILMN_2975295	006760136	S	1920	AAAGCAAGCTAGGGATGCTGGAGAGTTGGCTCCATGGTTAAGAACACTAG	6	-	34895483-34895532	6qB1	Mus musculus RIKEN cDNA 2010107G12 gene (2010107G12Rik), mRNA.				Gm468	Gm468
Mus musculus	MEEBO	ILMN_190773	ILMN_190773	C730026E21RIK	scl17962.1_192				31341908	NM_175439	C730026E21Rik		ILMN_2675738	005420010	S	1752	CTCGGCTAGTGAAAGCCCACAGGACCTAGGAACTCAGCTCTTACTGACTG										
Mus musculus	MEEBO	ILMN_211924	ILMN_211924	4833421E05RIK	scl067732.2_80				27754070	NM_026347	4833421E05Rik		ILMN_2620804	006350348	S	424	CATCCTTATCACGCCACCCCCGCTCTGCGAAGCCGCCTGGGAGAAGGAGT										
Mus musculus	RefSeq	ILMN_189725	ILMN_189725	ZFP192	NM_139141.3	NM_139141.3		93681	76253920	NM_139141.3	Zfp192	NP_631880.2	ILMN_2463828	005490360	S	2105	CAGCTGTAACAAAGCTAAGAACAGCACTTGACTAGTTTGGGCCCAATCCC	13	-	21611732-21611781	13qA3.1	Mus musculus zinc finger protein 192 (Zfp192), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	LD5-1; 2510038J07Rik; D430019P06Rik	LD5-1; 2510038J07Rik; D430019P06Rik
Mus musculus	RefSeq	ILMN_199135	ILMN_236162	SMCR7	NM_001009927.1	NM_001009927.1		237781	57862818	NM_001009927.1	Smcr7	NP_001009927.1	ILMN_2534170	006480291	S	1372	AACGGTTTCTGCAAGCCCTGGAGTTTCTGGTGGGCAGCTTGGAGCAGGCT	11	+	60545303-60545352	11qB2	Mus musculus Smith-Magenis syndrome chromosome region, candidate 7 homolog (human) (Smcr7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC113770; AI482195; Gm11	MGC113770; AI482195; Gm11
Mus musculus	RefSeq	ILMN_236162	ILMN_236162	SMCR7	NM_001009927.1	NM_001009927.1		237781	57862818	NM_001009927.1	Smcr7	NP_001009927.1	ILMN_2995370	006380092	S	2184	GGGCCACGAATTACCTCTGGGAGAACAACTTCCTCACTGGGGGGCTGAAC	11	+	60546115-60546164	11qB2	Mus musculus Smith-Magenis syndrome chromosome region, candidate 7 homolog (human) (Smcr7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC113770; AI482195; Gm11	MGC113770; AI482195; Gm11
Mus musculus	RefSeq	ILMN_220285	ILMN_228022	PRDM13	NM_001080771.1	NM_001080771.1		230025	124107611	NM_001080771.1	Prdm13	NP_001074240.1	ILMN_1217474	004640681	S	2507	TGTCGCAATTCTGGGGATGGTGTCGGATTAGGAACAGTGAGCCGCTCCAG	4	-	21605244-21605293	4qA3	Mus musculus PR domain containing 13 (Prdm13), mRNA. XM_977119					
Mus musculus	RefSeq	ILMN_222097	ILMN_222097	CYGB	NM_030206.1	NM_030206.1		114886	19549319	NM_030206.1	Cygb	NP_084482.1	ILMN_2801891	005360735	S	1670	GAGGCGGAGGAAGGACAATCGTTGCGTCTGAGGTCAGGTGGTCATCTACC	11	-	116462296-116462345	11qE2	Mus musculus cytoglobin (Cygb), mRNA.	A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence ISS]	Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence ISS]	3110001K20Rik; HGb; Staap	3110001K20Rik; HGb; Staap
Mus musculus	RefSeq	ILMN_220835	ILMN_220835	COX8B	NM_007751.2	NM_007751.2		12869	83921592	NM_007751.2	Cox8b	NP_031777.1	ILMN_2727520	003710154	S	222	CGTTGGCTTCATGGTTCCAGCAGGATGGGTCTTAGCCCACTTGGAGAGCT	7	-	148084909-148084958	7qF5	Mus musculus cytochrome c oxidase, subunit VIIIb (Cox8b), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]	COX8H; MGC107661	COX8H; MGC107661
Mus musculus	Riken	ILMN_202938	ILMN_202938	A230104N20RIK	ri|A230104N20|PX00063N05|AK039177|1684					AK039177	A230104N20Rik		ILMN_1216677	006620093	S	1431	ACTGGCATTTCCATCAGTGAGGGTGAGAATGACTGCTAGCTGGTGCTAAG										
Mus musculus	RefSeq	ILMN_198108	ILMN_198108	LOC380617	XM_149644.3	XM_149644.3			38081863	XM_149644.3	LOC380617		ILMN_1213986	002100561	S	1820	CTCGGAGGTTGGATGGAGAGAGAGTGTGCTGGGAGTAAAGGTCCCTAGAG										
Mus musculus	MEEBO	ILMN_224178	ILMN_224178	CHML	scl15889.1.1_221				10946669	NM_021350	Chml		ILMN_2776066	007000471	S	1707	ACCTTCCAATGTGTACATCTGCTCTGGGCCTGACTGGGGACTGGGGAGTG						A heterodimeric enzyme complex, which in mammals is composed of an alpha and a beta subunit, and which associates with an accessory protein Rep (Rab escort protein). Catalyzes of the transfer of a geranyl-geranyl moiety from geranylgeranyl pyrophosphate to a Rab protein [goid 5968] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199670	ILMN_199670	LOC383809	XM_357269.1	XM_357269.1			38075860	XM_357269.1	LOC383809		ILMN_2536068	001450736	S	160	GGCTGCAACTGCTGCATGAGGAGCCACAGTGAAGACAAGCCTGGTGGTCA										
Mus musculus	RefSeq	ILMN_212471	ILMN_212471	1110049F12RIK	NM_025411.3	NM_025411.3		66193	141802905	NM_025411.3	1110049F12Rik	NP_079687.2	ILMN_1255697	004060687	S	1277	GGAGTCTCCTGATACATGACTGCTTGGGGAAGGTCTTACACAGTCTAGCC	4	-	135531729-135531778	4qD3	Mus musculus RIKEN cDNA 1110049F12 gene (1110049F12Rik), mRNA.				Trp26; RP23-161N17.10; AA408179	Trp26; RP23-161N17.10; AA408179
Mus musculus	RefSeq	ILMN_212471	ILMN_212471	1110049F12RIK	NM_025411.3	NM_025411.3		66193	141802905	NM_025411.3	1110049F12Rik	NP_079687.2	ILMN_1221838	000780332	S	590	GGAGCAGATACGACGAAGATCTTTTATATTGGCCTGCGGGGAGAGTGGAC	4	-	135533068-135533117	4qD3	Mus musculus RIKEN cDNA 1110049F12 gene (1110049F12Rik), mRNA.				Trp26; RP23-161N17.10; AA408179	Trp26; RP23-161N17.10; AA408179
Mus musculus	MEEBO	ILMN_186459	ILMN_186459	NRXN3	scl42902.22_42				27881432	NM_172544	Nrxn3		ILMN_2640908	003990603	S	1752	TGCAGATACACTGCGTCTAGAGTTGGATGGTGGGCGTGTCAAGCTCATGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence ISA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; The biosynthesis of a synapse [goid 7416] [evidence IGI]	 [goid 5246] [evidence IGI]		
Mus musculus	RefSeq	ILMN_209456	ILMN_209456	BC005537	NM_024473.3	NM_024473.3		79555	133892322	NM_024473.3	BC005537	NP_077793.1	ILMN_1227295	004900725	S	2390	CCTCCGTCCTTACATGCCAGAGTAAATAAGAGCATTGACCAGCAAAATGG	13	+	24904607-24904631:24904632-24904656	13qA3.1	Mus musculus cDNA sequence BC005537 (BC005537), mRNA.				C78201; 8030460C05Rik; RP23-92G13.4; MGC7474	C78201; 8030460C05Rik; RP23-92G13.4; MGC7474
Mus musculus	RefSeq	ILMN_223233	ILMN_223233	CYP2D22	NM_019823.3	NM_019823.3		56448	148747521	NM_019823.3	Cyp2d22	NP_062797.3	ILMN_1214498	002340608	S	1535	CCCGCTAAGAGGATGTATGACATCTCACTCACTGTGCTTGCTGGGGTCCT				15qE1	Mus musculus cytochrome P450, family 2, subfamily d, polypeptide 22 (Cyp2d22), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	2D22	2D22
Mus musculus	RefSeq	ILMN_217438	ILMN_217438	SH2B1	NM_011363.2	NM_011363.2		20399	125347323	NM_011363.2	Sh2b1	NP_035493.2	ILMN_1256412	002940372	S	3166	GTTCATGAGCCCTGTTAAGTCCCCAGTTACTACACACTACAGGTGCCCTT	7	-	133610714-133610763	7qF3	Mus musculus SH2B adaptor protein 1 (Sh2b1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [evidence IDA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mKIAA1299; C530001K22Rik; AI425885; Sh2bpsm1; SH2-Bb; SH2-B; Irip	mKIAA1299; C530001K22Rik; AI425885; Sh2bpsm1; SH2-Bb; SH2-B; Irip
Mus musculus	RefSeq	ILMN_217438	ILMN_217438	SH2B1	NM_011363.2	NM_011363.2		20399	125347323	NM_011363.2	Sh2b1	NP_035493.2	ILMN_3139354	000830215	A	2829	TGGCTGAGCTGGTCCCCATGGTTGAATTGGAAGAGGCCATAGCACCAGGC	7	-	133611051-133611100	7qF3	Mus musculus SH2B adaptor protein 1 (Sh2b1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [evidence IDA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mKIAA1299; C530001K22Rik; AI425885; Sh2bpsm1; SH2-Bb; SH2-B; Irip	mKIAA1299; C530001K22Rik; AI425885; Sh2bpsm1; SH2-Bb; SH2-B; Irip
Mus musculus	RefSeq	ILMN_217762	ILMN_217762	GJA1	NM_010288.2	NM_010288.2		14609	21687178	NM_010288.2	Gja1	NP_034418.1	ILMN_1244291	001710193	S	2980	GTAGACCTAGCCCATCCAATCAATGTGCTCGGGAAAGTGTTCTTTATTCA	10	+	56110147-56110196	10qB4	Mus musculus gap junction membrane channel protein alpha 1 (Gja1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]	The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2070] [evidence IMP]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IDA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of striated muscle development [goid 45844] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The regrowth of muscle tissue to repair injured or damaged muscle fibers in the postnatal stage [goid 43403] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; A wide pore channel activity that enables a direct cytoplasmic connection from one cell to an adjacent cell. The gap junction can pass large solutes as well as electrical signals between cells. Gap junctions consist of two gap junction hemi-channels, or connexons, one contributed by each membrane through which the gap junction passes [goid 5243] [evidence IDA]	Npm1; Cx43; AU042049; AW546267; Cnx43; connexin43; Cx43alpha1; Gja-1	Npm1; Cx43; AU042049; AW546267; Cnx43; connexin43; Cx43alpha1; Gja-1
Mus musculus	RefSeq	ILMN_222776	ILMN_226305	CCDC15	NM_001081429.1	NM_001081429.1		245902	124487468	NM_001081429.1	Ccdc15	NP_001074898.1	ILMN_2754569	005340470	S	2086	TCAGTGGCCATGAATGTCTTCCACCCAGACAACGGAGAGACACGTGCAGC	9	-	37118911-37118960	9qA4	Mus musculus coiled-coil domain containing 15 (Ccdc15), mRNA.				D030074L19; A630039F14Rik	D030074L19; A630039F14Rik
Mus musculus	RefSeq	ILMN_219539	ILMN_219539	FKBPL	NM_019873.2	NM_019873.2		56299	31980974	NM_019873.2	Fkbpl	NP_063926.1	ILMN_2710201	005720040	S	540	AAAATGTGGGGGGAACTCATGGAAAAATGCCTGGAGTCTATGCGTCAAGG	17	+	34782587-34782636	17qB1	Mus musculus FK506 binding protein-like (Fkbpl), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ppiase-X; DIR1; NG7; Wisp39	Ppiase-X; DIR1; NG7; Wisp39
Mus musculus	RefSeq	ILMN_219539	ILMN_219539	FKBPL	NM_019873.2	NM_019873.2		56299	31980974	NM_019873.2	Fkbpl	NP_063926.1	ILMN_2933426	003800400	S	741	TTTCGAGCTGGGAACCCTCAAGGGGCTGCCCGATGCTATGGACGGGCTCT	17	+	34782788-34782837	17qB1	Mus musculus FK506 binding protein-like (Fkbpl), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ppiase-X; DIR1; NG7; Wisp39	Ppiase-X; DIR1; NG7; Wisp39
Mus musculus	RefSeq	ILMN_199629	ILMN_255471	LOC383770	XM_908538.2	XM_908538.2		383770	149250405	XM_908538.2	LOC383770	XP_913631.2	ILMN_1213414	006520181	S	317	CCCCAAACTCAAGCAGCCGGCTTTCATCTCTCACCCTAAGCTTGGGAAGT				2qH2	PREDICTED: Mus musculus similar to ribosomal protein (LOC383770), mRNA.					
Mus musculus	RefSeq	ILMN_210385	ILMN_210385	RSL1D1	NM_025546.2	NM_025546.2		66409	142385918	NM_025546.2	Rsl1d1	NP_079822.1	ILMN_2605096	002000341	S	1302	CAGAGGCCAGTTCCTTCTCTACTCCCAGGAAATCTGGAAAGAAGGCTTCC	16	-	11193617-11193666	16qA1	Mus musculus ribosomal L1 domain containing 1 (Rsl1d1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]			pBK1; C76439; 2410005K20Rik	pBK1; C76439; 2410005K20Rik
Mus musculus	Riken	ILMN_201852	ILMN_201852	3830421F03RIK	ri|3830421F03|PX00007M10|AK014446|1917					AK014446	3830421F03Rik		ILMN_1258275	007380397	S	1768	GGAATCCCAACGTGCAGGAGGCTAAGGTCAGAACATCTGGGTCTGAGGCC										
Mus musculus	Riken	ILMN_207254	ILMN_207254	F830034F18RIK	ri|F830034F18|PL00007E13|AK089864|1818					AK089864	F830034F18Rik		ILMN_2586205	006770739	S	1516	AAGAGGTTTATCTTTCATGGATGGCTTTTCAAAGATGGCCCCAGGAACAG										
Mus musculus	Riken	ILMN_205027	ILMN_205027	A430083I17RIK	ri|A430083I17|PX00138D06|AK040290|1911					AK040290	A430083I17Rik		ILMN_2569440	001740465	S	1675	GAGCTGAGGACAGAACAGTGGTAGATGTGATGGGCTCATCAGTTGGCTGG										
Mus musculus	RefSeq	ILMN_242948	ILMN_242948	OLFR105	NM_001011744.2	NM_001011744.2		257893	153792179	NM_001011744.2	Olfr105	NP_001011744.2	ILMN_3161349	001450563	S	585	ACTCAACAGGTGGCTGCTCAATACTCTTGCAGGGACCATTGGTATTGGCC				17qB1	Mus musculus olfactory receptor 105 (Olfr105), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR250-7	MOR250-7
Mus musculus	RefSeq	ILMN_201536	ILMN_201536	SNN	NM_009223.1	NM_009223.1			6678050	NM_009223.1	Snn		ILMN_2542802	006110750	S	291	GGGGCCATGTGTGGAAAGAAAGGCCAAGTTGATGACCGCCAACAGCCCAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_204232	ILMN_204232	SEMA5A	ri|A730090O07|PX00153E15|AK043386|3726					AK043386	Sema5a		ILMN_1227400	001400164	S	3500	GCCTGGCACTTGGGGGTCAATCATGCAGCTTTATCTTGCTCTCTTTCCTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	 [goid 8046] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196202	ILMN_232597	KLHDC5	NM_001081237.1	NM_001081237.1		232539	124486990	NM_001081237.1	Klhdc5	NP_001074706.1	ILMN_2522542	007050537	S	6147	CCTACAGGAAGCCCGTGAAATGAAAAAGAGGGTCCATTCCGTAGAGCCCA	6	+	147060876-147060925	6qG3	Mus musculus kelch domain containing 5 (Klhdc5), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C230080I20Rik; A330079N23Rik; mKIAA1340	C230080I20Rik; A330079N23Rik; mKIAA1340
Mus musculus	RefSeq	ILMN_205385	ILMN_232597	KLHDC5	NM_001081237.1	NM_001081237.1		232539	124486990	NM_001081237.1	Klhdc5	NP_001074706.1	ILMN_1248955	001170224	S	3900	CCAGGATAACTCCAAACTGGAGACTCTCACCTCAGCCTCTTGCTTCTGTG	6	+	147058629-147058678	6qG3	Mus musculus kelch domain containing 5 (Klhdc5), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C230080I20Rik; A330079N23Rik; mKIAA1340	C230080I20Rik; A330079N23Rik; mKIAA1340
Mus musculus	RefSeq	ILMN_232597	ILMN_232597	KLHDC5	NM_001081237.1	NM_001081237.1		232539	124486990	NM_001081237.1	Klhdc5	NP_001074706.1	ILMN_3045293	003400685	I	2697	AGAGGCAGCCAGAGCATCCACATAAGCAGCCAGAGCATCCACAAACGTGG	6	+	147057426-147057475	6qG3	Mus musculus kelch domain containing 5 (Klhdc5), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C230080I20Rik; A330079N23Rik; mKIAA1340	C230080I20Rik; A330079N23Rik; mKIAA1340
Mus musculus	RefSeq	ILMN_229801	ILMN_229801	EFNA3	NM_010108.1	NM_010108.1		13638	117935035	NM_010108.1	Efna3	NP_034238.1	ILMN_2818879	001660762	S	621	GAGAGAATCCCCAGGTGCCCAAGCTTGAGAAGAGCATCAGTGGGACCAGC	3	-	89119427-89119476	3qF1	Mus musculus ephrin A3 (Efna3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			Epl3; LERK-3; MGC129300; EFL-2; MGC129301; Ehk1-L	Epl3; LERK-3; MGC129300; EFL-2; MGC129301; Ehk1-L
Mus musculus	RefSeq	ILMN_206227	ILMN_323362	LOC100041569	XM_001476596.1	XM_001476596.1		100041569	149264996	XM_001476596.1	LOC100041569	XP_001476646.1	ILMN_1229544	003800300	S	988	AAGGGTATGTGGTAGGACCTGAGGAATTGCCTGCCTTACAGTCTGCTGAC	14	-	7109057-7109106	14qA1	PREDICTED: Mus musculus hypothetical protein LOC100041569 (LOC100041569), mRNA.					
Mus musculus	Riken	ILMN_202753	ILMN_202753	4921524P20RIK	ri|4921524P20|PX00014F18|AK019542|2862					AK019542	4921524P20Rik		ILMN_1247819	003990088	S	1347	CCAGGAGGATAGGCGTGTGCCACCACAGTTGGTTTAGCCGACCCATAAGG										
Mus musculus	RefSeq	ILMN_209501	ILMN_209501	2310007L24RIK	XM_126508.5	XM_126508.5		75573	94391030	XM_126508.5	2310007L24Rik	XP_126508.3	ILMN_2596403	001510259	S	714	CAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTCTGGAGTAAAGGCTCCT	11	+	106238353-106238402	11qE1	PREDICTED: Mus musculus RIKEN cDNA 2310007L24 gene, transcript variant 1 (2310007L24Rik), mRNA.					
Mus musculus	MEEBO	ILMN_215991	ILMN_215991	E330013P04RIK	scl0107376.6_174	NM_175355.2			31341696	NM_175355.2	E330013P04Rik		ILMN_2666093	004150707	S	1515	CTCTTCCCGTCTCTTTTGAGTTGAATGCATTTGTGAACCACTGCCAAGAT										
Mus musculus	RefSeq	ILMN_210717	ILMN_227226	C730024G19RIK	XM_921354.2	XM_921354.2		232566	94378300	XM_921354.2	C730024G19Rik	XP_926447.1	ILMN_1217441	004860612	S	330	CTCTCCCGATTGTACAGGAGAGCTTTCTAAAATTCGGATAACAGTAGGGC				6qG3	PREDICTED: Mus musculus RIKEN cDNA C730024G19 gene, transcript variant 5 (C730024G19Rik), mRNA.					
Mus musculus	MEEBO	ILMN_219765	ILMN_219765	DBIL5	scl41247.2_47	NM_021294.1			10946591	NM_021294.1	Dbil5		ILMN_2713362	005720736	S	662	GCCTTTCTGTGGTCTGACTGGCATTAATAGTCTTCCCAGTTCCACAATGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211593	ILMN_211593	STK11IP	NM_027886.2	NM_027886.2		71728	40254180	NM_027886.2	Stk11ip	NP_082162.2	ILMN_2617441	004280451	S	4352	GGCTCTCAAAGTAATCTCACCTACTTCTGTTTTGTTCAACGCTGCCCTGA	1	+	75533821-75533870	1qC4	Mus musculus serine/threonine kinase 11 interacting protein (Stk11ip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1200014D22Rik; LKB1IP; LIP1; BB131189	1200014D22Rik; LKB1IP; LIP1; BB131189
Mus musculus	MEEBO	ILMN_195235	ILMN_195235	4432404P07RIK	scl0070787.1_319						4432404P07Rik		ILMN_1213186	002100424	S	11	TTTGGAGTGGACATAGTAGGGGTGGAACTCAGAATTTGGTGCATGCTGAG										
Mus musculus	RefSeq	ILMN_215037	ILMN_215037	MAML1	NM_175334.2	NM_175334.2		103806	31341628	NM_175334.2	Maml1	NP_780543.1	ILMN_2841043	007650674	S	4451	CTCCGAGCCATGACTCAAGAAGAAAAGGGTGCTCGGACTCTCTTATACAC	11	-	50069435-50069484	11qB1.3	Mus musculus mastermind like 1 (Drosophila) (Maml1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISA]	D930008C07Rik; Mam1; RP23-237P10.1; AI644666; mKIAA0200; AW743257; Mam-1	D930008C07Rik; Mam1; RP23-237P10.1; AI644666; mKIAA0200; AW743257; Mam-1
Mus musculus	RefSeq	ILMN_201426	ILMN_201426	LOC385144	XM_358085.1	XM_358085.1			38093625	XM_358085.1	LOC385144		ILMN_1224810	000510142	S	529	GTAGGAAGACCCCAGAGACCCCACAGGATGCTCCACACTGACAGGCTCGG										
Mus musculus	RefSeq	ILMN_201656	ILMN_315299	NEURL2	NM_001082974.1	NM_001082974.1		415115	133505675	NM_001082974.1	Neurl2	NP_001076443.1	ILMN_1256950	002070066	S	821	CTGCTCAGCCCCTCTACGCTGTGGTAGATGTGTTTGCTTCCACCAAGAGC	2	-	164658226-164658275	2qH3	Mus musculus neuralized-like 2 (Drosophila) (Neurl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Terminal anchorage site of skeletal muscle cells to tendons; a specialised type of contact between the cell and the extracellular matrix in skeletal muscle [goid 5927] [evidence IDA]; A protein complex that possesses ubiquitin ligase activity; the complex is usually pentameric; for example, in mammals the subunits are pVHL, elongin B, elongin C, cullin-2 (Cul2), and Rbx1 [goid 30891] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [evidence IMP]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ozz; Ozz-E3	Ozz; Ozz-E3
Mus musculus	RefSeq	ILMN_221861	ILMN_221861	UBL4B	NM_026261.2	NM_026261.2		67591	141802043	NM_026261.2	Ubl4b	NP_080537.1	ILMN_2741322	006900279	S	926	TGGCCCATGGTATGCTATAGGGACAGTCAGAGTTCACCCTGGCTCTGAGT	3	-	107357016-107357065	3qF2.3	Mus musculus ubiquitin-like 4B (Ubl4b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		4930522D07Rik	4930522D07Rik
Mus musculus	Riken	ILMN_204536	ILMN_204536	B230353G19RIK	ri|B230353G19|PX00161I13|AK046215|2735					AK046215	B230353G19Rik		ILMN_2565738	003710102	S	2354	ACATGGGCCTTAGTGCCCTCCTCTGAAAGAGAAGGTAGAGGTGGGGGTCA										
Mus musculus	RefSeq	ILMN_242056	ILMN_242056	ITPRIP	NM_001001738.2	NM_001001738.2		414801	111185915	NM_001001738.2	Itprip	NP_001001738.2	ILMN_2995794	002940612	S	3529	GGCAACCAAGAACCAGCCTCCAGAAGCCAAGACCCAACCTGAGCCTCCTT	19	-	47969273-47969322	19qD1	Mus musculus inositol 1,4,5-triphosphate receptor interacting protein (Itprip), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			KIAA1754; mKIAA1754; DANGER	KIAA1754; mKIAA1754; DANGER
Mus musculus	RefSeq	ILMN_209277	ILMN_209277	PTS	NM_011220.2	NM_011220.2		19286	31982767	NM_011220.2	Pts	NP_035350.1	ILMN_2848548	002450373	S	881	ATCTGATGCCCTCTTCTGGCATGTAGTTGTACATGCAGACAAAGCATTCC	9	-	50329827-50329876	9qA5.3	Mus musculus 6-pyruvoyl-tetrahydropterin synthase (Pts), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydropterin = 6-pyruvoyl-5,6,7,8-tetrahydropterin + triphosphate [goid 3874] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	PTPS	PTPS
Mus musculus	RefSeq	ILMN_209277	ILMN_209277	PTS	NM_011220.2	NM_011220.2		19286	31982767	NM_011220.2	Pts	NP_035350.1	ILMN_1217378	001940465	S	20	TGACCTTCGTCGCCGCGCGCGACTGTCGCGCCTCGTGTCCTTCAGCGCGA	9	-	50336677-50336726	9qA5.3	Mus musculus 6-pyruvoyl-tetrahydropterin synthase (Pts), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydropterin = 6-pyruvoyl-5,6,7,8-tetrahydropterin + triphosphate [goid 3874] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	PTPS	PTPS
Mus musculus	Riken	ILMN_204897	ILMN_204897	RIN	ri|A630008B18|PX00143D06|AK041418|1675					AK041418	Rin		ILMN_1240667	001780561	S	1199	GCAATTTCAAAACATGCCCCCGACACACACACACAAATTAGGGACTACTC										
Mus musculus	Riken	ILMN_202368	ILMN_202368	4930512K19RIK	ri|4930512K19|PX00033C22|AK015776|792					AK015776	4930512K19Rik		ILMN_2549077	007610286	S	1	GGGCCAAGGGAAAATGGAGACAATTTTAGAGCAGCAACGGCGCTATCATG										
Mus musculus	MEEBO	ILMN_218455	ILMN_218455	C230030N03RIK	scl18086.3.1_301	NM_172847.1			27370277	NM_172847.1	C230030N03Rik		ILMN_1253107	000050066	S	2595	ATCTGGTGTGATTCAAGTAGGGACATCTGGGGACCTCAGCGGTGAAGGAC										
Mus musculus	MEEBO	ILMN_189738	ILMN_189738	C330050A14RIK	scl22206.1_553						C330050A14Rik		ILMN_2463946	001850608	S	11	CCAAACAGAAATGCCTTCAGCCAGTATCTCTACTCCTCCCCCACGTATAC										
Mus musculus	RefSeq	ILMN_188684	ILMN_231214	SFRS12IP1	NM_026075.2	NM_026075.2		67288	66955867	NM_026075.2	Sfrs12ip1	NP_080351.2	ILMN_2652085	002680280	S	1226	ATCATTTAGGTTACTAGGAAGTCTGGCAGAGAGATTCTATGCTAGTCAAG	13	+	105628278-105628327	13qD1	Mus musculus SFRS12-interacting protein 1 (Sfrs12ip1), mRNA.		Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AV348305; AI462702; AW121048	AV348305; AI462702; AW121048
Mus musculus	RefSeq	ILMN_220728	ILMN_220728	D3UCLA1	NM_030685.1	NM_030685.1		28146	13507608	NM_030685.1	D3Ucla1	NP_109610.1	ILMN_2805945	005220142	S	1755	ACAGGGCTTTGGATCCCCTCGGACCCCCTTGGACACAGAGGAGAAGGAAG	3	-	58610414-58610463	3qD	Mus musculus DNA segment, Chr 3, University of California at Los Angeles 1 (D3Ucla1), mRNA.				RAMP4; Serp1	RAMP4; Serp1
Mus musculus	Riken	ILMN_201872	ILMN_201872	SCYA28-PENDING	ri|4921506E08|PX00013P16|AK014821|1396					AK014821	Scya28-pending		ILMN_2545248	001850348	S	736	ACCAGCGGAGGCATAACTCGAGTGCAGACTCACAGGGAAGAAAGAGGGTC										
Mus musculus	RefSeq	ILMN_213094	ILMN_213094	SRRP	NM_177774.2	NM_177774.2		272009	31343060	NM_177774.2	Srrp	NP_808442.1	ILMN_2953888	007510537	S	2201	GCCAGATAGGTAGCACATGCCTGTCACCTCAGCAGCACTCAGGAAGCTGA	4	+	33561215-33561264	4qA5	Mus musculus serine-arginine repressor protein (Srrp), mRNA.				B830039L16	B830039L16
Mus musculus	MEEBO	ILMN_184805	ILMN_184805	MKIAA1457	scl0003973.1_92				37360391	AK129364	mKIAA1457		ILMN_2421721	003290681	S	20	GCCCCAACCTGGAGCGGGCCCCCTGCCTCCCTGACTTGGACATCGGAGAA										
Mus musculus	RefSeq	ILMN_198574	ILMN_198574	LOC270567	XM_195346.2	XM_195346.2			38086270	XM_195346.2	LOC270567		ILMN_1250259	006960471	S	130	ACCTTCTGGCAGCCCAAGTCCCTGTGGGTTCTGAGAAAGCCAAAATATCC										
Mus musculus	RefSeq	ILMN_216496	ILMN_216496	CAMK1	NM_133926.2	NM_133926.2		52163	118129899	NM_133926.2	Camk1	NP_598687.1	ILMN_2671721	007100014	S	1364	ACTGCGTTTTCCATACAAATGTTTCTATTTTATTGTTCCTTCTTGTAATA	6	-	113284138-113284187	6qE3	Mus musculus calcium/calmodulin-dependent protein kinase I (Camk1), mRNA.	An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]	AI505105; D6Ertd263e; CaMKIalpha	AI505105; D6Ertd263e; CaMKIalpha
Mus musculus	RefSeq	ILMN_216496	ILMN_216496	CAMK1	NM_133926.2	NM_133926.2		52163	118129899	NM_133926.2	Camk1	NP_598687.1	ILMN_1216632	006380538	S	211	TCTCAGAAGTGATCCTGGCAGAGGACAAGAGGACTCAGAAACTGGTGGCC	6	-	113290359-113290408	6qE3	Mus musculus calcium/calmodulin-dependent protein kinase I (Camk1), mRNA.	An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]	AI505105; D6Ertd263e; CaMKIalpha	AI505105; D6Ertd263e; CaMKIalpha
Mus musculus	RefSeq	ILMN_216496	ILMN_216496	CAMK1	NM_133926.2	NM_133926.2		52163	118129899	NM_133926.2	Camk1	NP_598687.1	ILMN_2693677	006660543	S	808	TTTTGAAGGCAGAGTATGAGTTTGACTCTCCTTATTGGGACGACATCTCT	6	-	113287193-113287242	6qE3	Mus musculus calcium/calmodulin-dependent protein kinase I (Camk1), mRNA.	An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]	AI505105; D6Ertd263e; CaMKIalpha	AI505105; D6Ertd263e; CaMKIalpha
Mus musculus	RefSeq	ILMN_216496	ILMN_216496	CAMK1	NM_133926.2	NM_133926.2		52163	118129899	NM_133926.2	Camk1	NP_598687.1	ILMN_2944939	004490044	S	898	ACCCGGAGAAGAGGTTTACCTGTGAGCAGGCCTTGCAGCACCCATGGATT	6	-	113286251-113286255:113286352-113286396	6qE3	Mus musculus calcium/calmodulin-dependent protein kinase I (Camk1), mRNA.	An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]	AI505105; D6Ertd263e; CaMKIalpha	AI505105; D6Ertd263e; CaMKIalpha
Mus musculus	RefSeq	ILMN_209809	ILMN_209809	KTI12	NM_029571.2	NM_029571.2		100087	141803069	NM_029571.2	Kti12	NP_083847.1	ILMN_2599412	004860468	S	1485	TCTGTCCCTGGGAAACTGATATTTGTGTAAGACAACCACCAGATATTTTC	4	+	108521946-108521995	4qC7	Mus musculus KTI12 homolog, chromatin associated (S. cerevisiae) (Kti12), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AU014758; 1110001A12Rik; AI326810	AU014758; 1110001A12Rik; AI326810
Mus musculus	RefSeq	ILMN_223570	ILMN_223570	TIMM8A1	NM_013898.1	NM_013898.1		30058	7305576	NM_013898.1	Timm8a1	NP_038926.1	ILMN_2896552	004070538	S	1064	ACCGCGACTTAGGCCAGTTCAGAACTAACAACTGTTTCAGGTAGAGGTGC	X	-	129883677-129883726	XqE3	Mus musculus translocase of inner mitochondrial membrane 8 homolog a1 (yeast) (Timm8a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Fci-12; Ddp1; Tim8a; Timm8a; DXHXS1274E	Fci-12; Ddp1; Tim8a; Timm8a; DXHXS1274E
Mus musculus	RefSeq	ILMN_217783	ILMN_217783	SDPR	NM_138741.1	NM_138741.1		20324	20270266	NM_138741.1	Sdpr	NP_620080.1	ILMN_2687547	003180543	S	2863	GGCAGCAGTCCTGGGCTGCACTCTGACTTTCAGAGAAGGAGTGAGGTGAA	1	+	51359612-51359661	1qC1.1	Mus musculus serum deprivation response (Sdpr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]		
Mus musculus	Riken	ILMN_206300	ILMN_206300	C130099E04RIK	ri|C130099E04|PX00172N14|AK082061|4871					AK082061	C130099E04Rik		ILMN_1236530	000840424	S	4705	CTCCATCTTTTGAGCCACCATTGCTTTTCCTGAGTGGAGGGGGGGAGGGG										
Mus musculus	RefSeq	ILMN_197534	ILMN_197534	LOC332024	XM_285096.2	XM_285096.2			38076473	XM_285096.2	LOC332024		ILMN_1247063	006980220	S	601	TACGACGGACTGAGGCAGCTTCGTGCTCACCGAAAGCATGTGCCCGTGTG										
Mus musculus	RefSeq	ILMN_199887	ILMN_310676	LOC639781	XM_001474878.1	XM_001474878.1		639781	149252853	XM_001474878.1	LOC639781	XP_001474928.1	ILMN_1218882	006840470	S	520	CGACCTCTCATGCAATGGAGAGACAGAAGAGGGGAGGTCATTCCAGCTGC	4	+	111693988-111694037	4qD1	PREDICTED: Mus musculus hypothetical LOC639781 (LOC639781), mRNA.					
Mus musculus	RefSeq	ILMN_230895	ILMN_230895	PANX2	NM_001002005.1	NM_001002005.1		406218	50284540	NM_001002005.1	Panx2	NP_001002005.1	ILMN_3161563	005700707	S	1645	GCAGCACCCACCAAAGAGATGCTCCACTCCCCGAGAAGGAAATCCCGTAC	15	+	88899436-88899451:88899608-88899609:88899964-88899995	15qE3	Mus musculus pannexin 2 (Panx2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]				
Mus musculus	RefSeq	ILMN_193670	ILMN_225245	3222402P14RIK	XM_977996.1	XM_977996.1		235542	94386402	XM_977996.1	3222402P14Rik	XP_983090.1	ILMN_2499372	003140170	S	221	CTGACACTGTCTTCGGAAGTGAGCTGCCCGCTTGGAAAGTAAACATTCAC				9qE4	PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene, transcript variant 13 (3222402P14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210711	ILMN_210711	OLFR1043	NM_146577.2	NM_146577.2		258570	113195668	NM_146577.2	Olfr1043	NP_666788.1	ILMN_3161873	002630181	S	681	GAAGCATTCGGGGGAAGGGAGGCAGAAAGTCTTCTCCACCTGTGCTTCTC	2	-	86002374-86002423	2qD	Mus musculus olfactory receptor 1043 (Olfr1043), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR185-7	MOR185-7
Mus musculus	RefSeq	ILMN_200167	ILMN_200167	LOC381670	XM_355638.1	XM_355638.1			38080758	XM_355638.1	LOC381670		ILMN_1253279	000610682	S	7360	GTGACCAAGTTCCAGGATGCCGATGAAGTAAACGAGCGTGCGGGGCAAGG										
Mus musculus	RefSeq	ILMN_242116	ILMN_242116	SS18	NM_009280.1	NM_009280.1		268996	6678146	NM_009280.1	Ss18	NP_033306.1	ILMN_2983228	002680468	S	2679	CTAGCCCAAAGGTAAGTTGCTGTATCCTCACAGTTGTCTGCATCCAGGGA	18	-	14784501-14784550	18qA1	Mus musculus synovial sarcoma translocation, Chromosome 18 (Ss18), mRNA.				Syt; D130059H17; Ssxt	Syt; D130059H17; Ssxt
Mus musculus	RefSeq	ILMN_186960	ILMN_242116	SS18	NM_009280.1	NM_009280.1		268996	6678146	NM_009280.1	Ss18	NP_033306.1	ILMN_2751963	003460152	S	1129	CCTCACAACATTACTACGAAGGAGGAAACTCCCAGTATGGCCAACAGCAA	18	-	14795101-14795127:14795901-14795923	18qA1	Mus musculus synovial sarcoma translocation, Chromosome 18 (Ss18), mRNA.				Syt; D130059H17; Ssxt	Syt; D130059H17; Ssxt
Mus musculus	RefSeq	ILMN_186960	ILMN_242116	SS18	NM_009280.1	NM_009280.1		268996	6678146	NM_009280.1	Ss18	NP_033306.1	ILMN_1233813	006100010	S	2911	GGGTGTTCTTCAACTTGGACAGTAGAAAATAGGCATCAAGTGTGAACCGG	18	-	14784269-14784318	18qA1	Mus musculus synovial sarcoma translocation, Chromosome 18 (Ss18), mRNA.				Syt; D130059H17; Ssxt	Syt; D130059H17; Ssxt
Mus musculus	MEEBO	ILMN_188255	ILMN_188255	1500001E21RIK	scl075700.1_113						1500001E21Rik		ILMN_2451115	002140368	S	15	GATTGACTAAAGAGGGGACCTCCCCTCTCAGAACTGTCCTCGCCAGAGGG										
Mus musculus	MEEBO	ILMN_224108	ILMN_224108	D4ST1	scl20435.1.153_28				31980714	NM_028117	D4st1		ILMN_2774938	004010053	S	2004	ATATTTTAATAGGATCCTTGTAAGGGCTAACTTTTAATAAAGCTTTTTCA										
Mus musculus	RefSeq	ILMN_216497	ILMN_216497	PDE4A	NM_019798.4	NM_019798.4		18577	145279176	NM_019798.4	Pde4a	NP_062772.2	ILMN_2692031	003870364	S	561	CGTGGACACCATGATGACATACATGCTGACGCTGGAGGACCACTACCACG				9qA3	Mus musculus phosphodiesterase 4A, cAMP specific (Pde4a), transcript variant 1, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence ISS]	Dpde2; D9Ertd60e	Dpde2; D9Ertd60e
Mus musculus	RefSeq	ILMN_216497	ILMN_216497	PDE4A	NM_019798.4	NM_019798.4		18577	145279176	NM_019798.4	Pde4a	NP_062772.2	ILMN_1226702	006180491	S	65	CTTTCATCATGCCTCTGGTTGACTTCTTCTGCGAGACCTGCTCCAAGCCC				9qA3	Mus musculus phosphodiesterase 4A, cAMP specific (Pde4a), transcript variant 1, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence ISS]	Dpde2; D9Ertd60e	Dpde2; D9Ertd60e
Mus musculus	RefSeq	ILMN_216285	ILMN_216285	PRL7A2	NM_011168.3	NM_011168.3		19114	141801384	NM_011168.3	Prl7a2	NP_035298.1	ILMN_1220021	005570692	S	804	ATGCTGAATCTTTTTAAATAATCTTAATTTTATAATTGTGAAAGTATAAT	13	-	27750876-27750925	13qA3.1	Mus musculus prolactin family 7, subfamily a, member 2 (Prl7a2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PLP-F; Prlpf	PLP-F; Prlpf
Mus musculus	RefSeq	ILMN_219885	ILMN_219885	CORO1A	NM_009898.2	NM_009898.2		12721	31982807	NM_009898.2	Coro1a	NP_034028.1	ILMN_2714796	004290661	S	1390	CCGTGTCAAGGCTGGAGGAGGACGTGAGGAATCTGAACGCCATAGTGCAA	7	-	133843445-133843494	7qF3	Mus musculus coronin, actin binding protein 1A (Coro1a), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a uropod, a rigid membrane projection with related cytoskeletal components at the trailing edge of a lymphocyte or other cell in the process of migrating or being activated [goid 32796] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IMP]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IGI]	TACO; p57; Clabp	TACO; p57; Clabp
Mus musculus	RefSeq	ILMN_219885	ILMN_219885	CORO1A	NM_009898.2	NM_009898.2		12721	31982807	NM_009898.2	Coro1a	NP_034028.1	ILMN_2733793	002480725	S	340	GCCACACTGCCCCTGTGCTAGACATCGCCTGGTGTCCACACAATGACAAT	7	-	133845555-133845604	7qF3	Mus musculus coronin, actin binding protein 1A (Coro1a), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a uropod, a rigid membrane projection with related cytoskeletal components at the trailing edge of a lymphocyte or other cell in the process of migrating or being activated [goid 32796] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IMP]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IGI]	TACO; p57; Clabp	TACO; p57; Clabp
Mus musculus	RefSeq	ILMN_219885	ILMN_219885	CORO1A	NM_009898.2	NM_009898.2		12721	31982807	NM_009898.2	Coro1a	NP_034028.1	ILMN_2787257	001500463	S	1163	TAGAAAGTCGGACCTGTTCCAGGAGGACCTGTATCCGCCCACTGCAGGAC	7	-	133843943-133843986:133844098-133844103	7qF3	Mus musculus coronin, actin binding protein 1A (Coro1a), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a uropod, a rigid membrane projection with related cytoskeletal components at the trailing edge of a lymphocyte or other cell in the process of migrating or being activated [goid 32796] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IMP]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IGI]	TACO; p57; Clabp	TACO; p57; Clabp
Mus musculus	RefSeq	ILMN_219885	ILMN_219885	CORO1A	NM_009898.2	NM_009898.2		12721	31982807	NM_009898.2	Coro1a	NP_034028.1	ILMN_2747060	000270661	S	1272	ATTTCCCTCAAGGATGGCTACGTGCCCCCAAAGAGCAGGGAGCTGAGGGT	7	-	133843834-133843883	7qF3	Mus musculus coronin, actin binding protein 1A (Coro1a), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a uropod, a rigid membrane projection with related cytoskeletal components at the trailing edge of a lymphocyte or other cell in the process of migrating or being activated [goid 32796] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IMP]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IGI]	TACO; p57; Clabp	TACO; p57; Clabp
Mus musculus	RefSeq	ILMN_200525	ILMN_200525	LOC381747	XM_355737.1	XM_355737.1			38083203	XM_355737.1	LOC381747		ILMN_2539062	005560170	S	590	GTGGTTCTTCTGAACAGGGCAACAACACTGAGAATGAGGAGGAAGGAGGG										
Mus musculus	RefSeq	ILMN_197943	ILMN_197943	LOC224126	XM_148683.3	XM_148683.3			38079761	XM_148683.3	LOC224126		ILMN_2529914	001580575	S	181	CCTTTGGGAATCCCAGGGTGAGCAGTGAGAAGGCACGAAGCTTGTTCCCT										
Mus musculus	RefSeq	ILMN_209490	ILMN_255551	LOC627424	XM_892084.2	XM_892084.2		627424	94397132	XM_892084.2	LOC627424	XP_897177.2	ILMN_2769573	004860072	S	1062	GAGGCTGGCGACAGTTAATCCAGAAAAGAATATAAAGGGAAAGCCACGCC	14	-	52130726-52130775	14qC2	PREDICTED: Mus musculus similar to nuclear receptor binding factor 2 (LOC627424), mRNA.					
Mus musculus	RefSeq	ILMN_199754	ILMN_255551	LOC627424	XM_892084.2	XM_892084.2		627424	94397132	XM_892084.2	LOC627424	XP_897177.2	ILMN_2536365	003120438	S	430	TTGAAAGCGCAGCAGAGCACGGAACGAGATGGAGCCCCCCACCTGCAGGC	14	-	52131358-52131407	14qC2	PREDICTED: Mus musculus similar to nuclear receptor binding factor 2 (LOC627424), mRNA.					
Mus musculus	RefSeq	ILMN_212082	ILMN_212082	1700029P11RIK	NM_025503.2	NM_025503.2		66346	141803455	NM_025503.2	1700029P11Rik	NP_079779.1	ILMN_1260016	002850543	S	565	TTTTTTGGCCAAGGGCCCACACCTCAGTAACACTGATTGACCTAAATATG	15	+	81811539-81811588	15qE1	Mus musculus RIKEN cDNA 1700029P11 gene (1700029P11Rik), mRNA.			Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]		
Mus musculus	Riken	ILMN_204633	ILMN_204633	C730037B14RIK	ri|C730037B14|PX00087E02|AK050319|3311					AK050319	C730037B14Rik		ILMN_1246372	006510364	S	2908	GCAGCTAAGCAGGCCTATGTCATGTGTCTAGTAAGAAGAACCGGTGACTG										
Mus musculus	RefSeq	ILMN_217456	ILMN_217456	OLFR859	NM_146526.2	NM_146526.2		258519	120953179	NM_146526.2	Olfr859	NP_666737.2	ILMN_1255186	006220180	S	777	CCTCAGTTCAACAGTTTCTAGTTCTTCCAAGGAAAGTATGGTGGCTTCGG	9	+	19613540-19613589	9qA3	Mus musculus olfactory receptor 859 (Olfr859), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR146-3	MOR146-3
Mus musculus	RefSeq	ILMN_212562	ILMN_212562	MLXIP	NM_177582.1	NM_177582.1		208104	46849804	NM_177582.1	Mlxip	NP_808250.1	ILMN_2627838	006450703	S	2299	TGCTTGAAAGGTTGCAGCAGGAAGAATTTGAACTTGAGGACAGTCTGAGT	5	+	123896551-123896600	5qF	Mus musculus MLX interacting protein (Mlxip), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW228700; mKIAA0867; B930074I24; Mir	AW228700; mKIAA0867; B930074I24; Mir
Mus musculus	RefSeq	ILMN_216742	ILMN_216742	PTGES3	NM_019766.4	NM_019766.4		56351	146134999	NM_019766.4	Ptges3	NP_062740.1	ILMN_2674720	001300048	S	1685	GGAAGATTTCTTGGCTGTCCTTTTAAGTGTCTGTTTGCTGTAATTTCATG				10qD3	Mus musculus prostaglandin E synthase 3 (cytosolic) (Ptges3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprosta-5,13-dienoate [goid 50220] [evidence IEA]	cPGES; p23; sid3177; 5730442A20Rik; Tebp; Ptges	cPGES; p23; sid3177; 5730442A20Rik; Tebp; Ptges
Mus musculus	RefSeq	ILMN_197318	ILMN_197318	LOC239502	XM_139402.2	XM_139402.2			38075113	XM_139402.2	LOC239502		ILMN_1250029	001850653	S	1427	GGATGATATGGTCCAGTCAACAAGACGAGGTCTTTTCTGCTCAGAACTTG										
Mus musculus	MEEBO	ILMN_190624	ILMN_190624	C130057N11RIK	scl0099061.1_96						C130057N11Rik		ILMN_1259818	004290427	S	2	TGGGCCTTCCTCTGCATTCCCAGTGTTCTTTGCTTAACTCCCTTTAATGC										
Mus musculus	RefSeq	ILMN_224220	ILMN_228899	CEP70	NM_023873.3	NM_023873.3		68121	117606315	NM_023873.3	Cep70	NP_076362.2	ILMN_1259385	003460564	S	1909	GATGACCTGGATGCCATCGTACCTGCAGTAAAGAAATTAAAGATCCTTTC	9	+	99200152-99200201	9qE3.3	Mus musculus centrosomal protein 70 (Cep70), mRNA.				C030018L16Rik; Bite; 6720484E09Rik	C030018L16Rik; Bite; 6720484E09Rik
Mus musculus	Riken	ILMN_206403	ILMN_206403	4930506K12RIK	ri|4930506K12|PX00033G05|AK076844|1443					AK076844	4930506K12Rik		ILMN_1245303	001240634	S	1174	CTACCACAGATGGGGAGGAGGGTCAGGAAATGAAGCCCTGGAGAGCCCAC										
Mus musculus	Riken	ILMN_203762	ILMN_203762	A130041O12RIK	ri|A130041O12|PX00122J10|AK037724|3038					AK037724	A130041O12Rik		ILMN_2559783	006370021	S	2301	GCCACACTTGAGCAGGGGCATTTCTAGAAAGTTCTGAGGGCCCAAAGGCT										
Mus musculus	RefSeq	ILMN_211955	ILMN_211955	FBXO8	NM_015791.3	NM_015791.3		50753	141802784	NM_015791.3	Fbxo8	NP_056606.2	ILMN_2765389	005890730	S	2850	TATTCAAGCCCTTTTTACAATAATTTTCTTTTCAAAATGAGAACATCTAT	8	+	59072059-59072108	8qB2	Mus musculus F-box protein 8 (Fbxo8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IPI]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IPI]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	Fbx8	Fbx8
Mus musculus	RefSeq	ILMN_211955	ILMN_211955	FBXO8	NM_015791.3	NM_015791.3		50753	141802784	NM_015791.3	Fbxo8	NP_056606.2	ILMN_2621113	001450433	S	595	CATGGGGTCACTGCTCTATATACAATAAGAACCCACCTTTAGGATTTTCT	8	+	59048095-59048144	8qB2	Mus musculus F-box protein 8 (Fbxo8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IPI]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IPI]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	Fbx8	Fbx8
Mus musculus	MEEBO	ILMN_219057	ILMN_219057	TDRKH	scl072634.6_30	XM_131021.5			38077872	XM_131021.5	Tdrkh		ILMN_1242503	000150598	S	3308	CCCTCAGTTAGAGGTCATAAGACCTGTAGTTAATTGTGTAAAAAGCCTAT								Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209000	ILMN_209000	BC049806	NM_172513.2	NM_172513.2		213056	46358375	NM_172513.2	BC049806	NP_766101.2	ILMN_2709051	001710131	S	3824	GTCTTAGATGGCAAAGCACGCCTACTTCATGCTGGAGCTCACAGGCGCAC	1	-	58584379-58584428	1qC1.3	Mus musculus cDNA sequence BC049806 (BC049806), mRNA.				D630010C10	D630010C10
Mus musculus	RefSeq	ILMN_209000	ILMN_209000	BC049806	NM_172513.2	NM_172513.2		213056	46358375	NM_172513.2	BC049806	NP_766101.2	ILMN_2864290	000380270	S	4030	GGCATACACCTTGAATCCCAGCACTCCAGAGGCAGAAGCAGGTGAATCTC	1	-	58584173-58584222	1qC1.3	Mus musculus cDNA sequence BC049806 (BC049806), mRNA.				D630010C10	D630010C10
Mus musculus	RefSeq	ILMN_209000	ILMN_209000	BC049806	NM_172513.2	NM_172513.2		213056	46358375	NM_172513.2	BC049806	NP_766101.2	ILMN_2591592	000630348	S	50	CTCAACAAATGAATTCCACACTTGAACTCTGCCGCATTCCTGTGCCACCT	1	-	58622729-58622778	1qC1.3	Mus musculus cDNA sequence BC049806 (BC049806), mRNA.				D630010C10	D630010C10
Mus musculus	RefSeq	ILMN_213286	ILMN_213286	RIOK2	NM_025934.1	NM_025934.1		67045	13385427	NM_025934.1	Riok2	NP_080210.1	ILMN_1228663	002570471	S	1725	TAGCCAGTATATTGGTCTTTTTTGGACCAAAGCCAGTAAATTATGGAAAT	17	+	17530631-17530680	17qA3.2	Mus musculus RIO kinase 2 (yeast) (Riok2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2010110K24Rik	2010110K24Rik
Mus musculus	Riken	ILMN_205924	ILMN_205924	1110008L16RIK	ri|B130047M19|PX00158K02|AK045209|3386					AK045209	1110008L16Rik		ILMN_2576227	004780504	S	3025	CCACAGTGGTGTGTGTGAGTTCATCTTGGCTGATGCTCTCAAGAGCTCTG										
Mus musculus	RefSeq	ILMN_223296	ILMN_223296	PLEC1	NM_201394.1	NM_201394.1		18810	41322940	NM_201394.1	Plec1	NP_958796.1	ILMN_3109360	000360014	A	14755	TGGCCCAGAGACACCGGCTGGCCCATCTATGCTAACAGAAGCATTTGGCC	15	-	76001602-76001651	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 11, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; AA591047; AU042537; PLTN; PCN	EBS1; AA591047; AU042537; PLTN; PCN
Mus musculus	RefSeq	ILMN_223296	ILMN_223296	PLEC1	NM_201394.1	NM_201394.1		18810	41322940	NM_201394.1	Plec1	NP_958796.1	ILMN_3035667	004570008	I	206	CCGGAAGGCCTGGGTAGCAAGAGAACCAGCTCAGAGGACAACCTCTACCT	15	-	76025885-76025934	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 11, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; AA591047; AU042537; PLTN; PCN	EBS1; AA591047; AU042537; PLTN; PCN
Mus musculus	RefSeq	ILMN_233236	ILMN_233236	IPMK	NM_027184.1	NM_027184.1		69718	58037170	NM_027184.1	Ipmk	NP_081460.1	ILMN_2938390	002470209	S	5137	ACACCCAGTTGTGTCCTTAGTAACATCCAGGCAGCAGTGCCAGTCCCCGC	10	+	70848353-70848402	10qB5.3	Mus musculus inositol polyphosphate multikinase (Ipmk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group into inositol or an inositol derivative. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms [goid 46853] [evidence IMP]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence ISO]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence ISO]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IMP]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5,6-tetrakisphosphate = ADP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate [goid 824] [evidence IMP]	2410017C19Rik; AA408208; Impk	2410017C19Rik; AA408208; Impk
Mus musculus	RefSeq	ILMN_199025	ILMN_233236	IPMK	NM_027184.1	NM_027184.1		69718	58037170	NM_027184.1	Ipmk	NP_081460.1	ILMN_1240247	002750398	S	2060	CACCCTCTTTTTATTACCAGTGAGGCTCCCGAGAGGTGAATGGTGGAAAC	10	+	70845276-70845325	10qB5.3	Mus musculus inositol polyphosphate multikinase (Ipmk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group into inositol or an inositol derivative. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms [goid 46853] [evidence IMP]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence ISO]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence ISO]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IMP]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5,6-tetrakisphosphate = ADP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate [goid 824] [evidence IMP]	2410017C19Rik; AA408208; Impk	2410017C19Rik; AA408208; Impk
Mus musculus	RefSeq	ILMN_199025	ILMN_233236	IPMK	NM_027184.1	NM_027184.1		69718	58037170	NM_027184.1	Ipmk	NP_081460.1	ILMN_2763825	001230577	S	5181	CCCCGCCCCCTGTTACTTGATGAATGAATGTATCCCTGTACTTTGGTGGA	10	+	70848397-70848446	10qB5.3	Mus musculus inositol polyphosphate multikinase (Ipmk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group into inositol or an inositol derivative. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms [goid 46853] [evidence IMP]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence ISO]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence ISO]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IMP]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5,6-tetrakisphosphate = ADP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate [goid 824] [evidence IMP]	2410017C19Rik; AA408208; Impk	2410017C19Rik; AA408208; Impk
Mus musculus	RefSeq	ILMN_204388	ILMN_233236	IPMK	NM_027184.1	NM_027184.1		69718	58037170	NM_027184.1	Ipmk	NP_081460.1	ILMN_1238179	001570187	S	1341	GACAGTTGAGTCTTGCTGCAGTCTGTGAAGGAGCGGGCCAATCACCATGG	10	+	70844557-70844566:70844567-70844606	10qB5.3	Mus musculus inositol polyphosphate multikinase (Ipmk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group into inositol or an inositol derivative. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms [goid 46853] [evidence IMP]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence ISO]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence ISO]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IMP]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5,6-tetrakisphosphate = ADP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate [goid 824] [evidence IMP]	2410017C19Rik; AA408208; Impk	2410017C19Rik; AA408208; Impk
Mus musculus	RefSeq	ILMN_190364	ILMN_234745	SEMA6C	NM_011351.1	NM_011351.1		20360	6755463	NM_011351.1	Sema6c	NP_035481.1	ILMN_1220277	004280767	S	638	GGACCTCAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGTGGCTTCG	3	+	94972577-94972626	3qF2.1	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C (Sema6c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		mKIAA1869; Semay	mKIAA1869; Semay
Mus musculus	RefSeq	ILMN_234745	ILMN_234745	SEMA6C	NM_011351.1	NM_011351.1		20360	6755463	NM_011351.1	Sema6c	NP_035481.1	ILMN_2876749	002360358	S	2699	GAAGGCCATCGCGGCCGCTCCCTGAAGAGGGTGGACGTGAAGTCTCCGCT	3	+	94977094-94977143	3qF2.1	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C (Sema6c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		mKIAA1869; Semay	mKIAA1869; Semay
Mus musculus	RefSeq	ILMN_211165	ILMN_248343	ARRDC2	NM_027560.1	NM_027560.1		70807	58037218	NM_027560.1	Arrdc2	NP_081836.1	ILMN_2613191	000380093	S	1281	CCAGCTTCCTGCAAGACTGGGGCCTGTGCACCATGATGGATCGGCCAGAG	8	-	73360757-73360806	8qB3.3	Mus musculus arrestin domain containing 2 (Arrdc2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ilad1; 4632416I05Rik	Ilad1; 4632416I05Rik
Mus musculus	RefSeq	ILMN_211165	ILMN_248343	ARRDC2	NM_027560.1	NM_027560.1		70807	58037218	NM_027560.1	Arrdc2	NP_081836.1	ILMN_2693835	000830524	S	2165	CAGGATACAGACAAGTACATCGCAAGGAGAACAGGCAACTGGGGCAGCTG	8	-	73359168-73359217	8qB3.3	Mus musculus arrestin domain containing 2 (Arrdc2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ilad1; 4632416I05Rik	Ilad1; 4632416I05Rik
Mus musculus	MEEBO	ILMN_191130	ILMN_191130	C530036F05RIK	scl25696.1.1_219						C530036F05Rik		ILMN_2476373	003370170	S	10	TGCTGGCCATAGGGAGTTACCTGTGCTTCACAAACACGTGTCTGCCAGGA										
Mus musculus	RefSeq	ILMN_215256	ILMN_215256	GLRA1	NM_020492.3	NM_020492.3		14654	118130520	NM_020492.3	Glra1	NP_065238.2	ILMN_2657254	001690333	S	1352	TGTTCTACTGGATCATCTATAAGATCGTCCGGAGAGAGGATGTCCACAAC	11	-	55328320-55328369	11qB1.3	Mus musculus glycine receptor, alpha 1 subunit (Glra1), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence ISO]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment [goid 43576] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment [goid 43576] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine [goid 60012] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IMP]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence ISO]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence IMP]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence IDA]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence IMP]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence ISO]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [evidence ISO]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [evidence IDA]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [evidence IMP]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]	oscillator; spasmodic; B230397M16Rik; spd; nmf11; ot	oscillator; spasmodic; B230397M16Rik; spd; nmf11; ot
Mus musculus	RefSeq	ILMN_253769	ILMN_253769	QPCT	NM_027455.1	NM_027455.1		70536	110625781	NM_027455.1	Qpct	NP_081731.1	ILMN_2814865	000990687	S	898	CCATTCCTTGAAGGATGTCTCTGGTTCCAAGCCAGATCTCTCACTCCGGC				17qE3	Mus musculus glutaminyl-peptide cyclotransferase (glutaminyl cyclase) (Qpct), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the reaction: L-glutaminyl-peptide = 5-oxoprolyl-peptide + NH3 [goid 16603] [evidence IEA]	5730422A13Rik	5730422A13Rik
Mus musculus	RefSeq	ILMN_232235	ILMN_232235	4930403C10RIK	NM_001033170.3	NM_001033170.3		73813	146198533	NM_001033170.3	4930403C10Rik	NP_001028342.1	ILMN_3161120	004150259	S	2498	GGTGACACACAACAGAGAGAAGATCACAGAGGAGGCCGTCCTTAGCTGCG				7qB4	Mus musculus RIKEN cDNA 4930403C10 gene (4930403C10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188074	ILMN_226799	FAM108B	NM_146096.3	NM_146096.3		226016	73622268	NM_146096.3	Fam108b	NP_666208.2	ILMN_2734234	006180431	S	1069	GGGGCAGGACACAATGACGTGGAGCTTTATGGACAATACCTTGAGAGGTT	19	+	21758721-21758770	19qB	Mus musculus family with sequence similarity 108, member B (Fam108b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Cgi67; MGC40949	Cgi67; MGC40949
Mus musculus	RefSeq	ILMN_207453	ILMN_207453	2610208M17RIK	NM_145626.3	NM_145626.3		108909	146134401	NM_145626.3	2610208M17Rik	NP_663601.1	ILMN_1260459	004900681	I	9	TAGGCCTCGCCGAGCCTCCCTTTCCTCACCACTGCGTACTAGGGCCCGAA					Mus musculus RIKEN cDNA 2610208M17 gene (2610208M17Rik), mRNA.				MGC6869; MGC101949; BC004835	MGC6869; MGC101949; BC004835
Mus musculus	RefSeq	ILMN_188354	ILMN_309980	CDC20B	XM_001473553.1	XM_001473553.1		238896	149264773	XM_001473553.1	Cdc20b	XP_001473603.1	ILMN_2451968	000770333	S	925	GGTTTTGCCCATTCCAGATGTATACAGAGGTTCCGAGGGCTACAGCAACG				13qD2.2	PREDICTED: Mus musculus cell division cycle 20 homolog B (S. cerevisiae) (Cdc20b), mRNA.					
Mus musculus	RefSeq	ILMN_212782	ILMN_212782	TAS2R117	NM_207021.1	NM_207021.1		353166	46309574	NM_207021.1	Tas2r117	NP_996904.1	ILMN_2630257	002510711	S	476	CCGACATGTGGACAAATGAATATCAAAGAAACATATCATGCAGCTTCAGT	6	+	132753394-132753443	6qG1	Mus musculus taste receptor, type 2, member 117 (Tas2r117), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Tas2r17; T2R17; mt2r54; mGR17	Tas2r17; T2R17; mt2r54; mGR17
Mus musculus	RefSeq	ILMN_212782	ILMN_212782	TAS2R117	NM_207021.1	NM_207021.1		353166	46309574	NM_207021.1	Tas2r117	NP_996904.1	ILMN_2829474	001400435	S	789	ATTACTGAAGAAAAATCTTTTCGTTGTATTTTGTGAGGTTGTATATATAG	6	+	132753707-132753756	6qG1	Mus musculus taste receptor, type 2, member 117 (Tas2r117), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Tas2r17; T2R17; mt2r54; mGR17	Tas2r17; T2R17; mt2r54; mGR17
Mus musculus	Riken	ILMN_205072	ILMN_205072	BTRC	ri|D330027D11|PX00192E10|AK052317|4502					AK052317	Btrc		ILMN_2569774	002320382	S	4222	AACCTGAGTTTGATCGCTAAGAGTCCCACAGTGGAAGGAGGACTGACGTC								Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_251733	ILMN_215929	SLC7A15	NM_177802.3	NM_177802.3		328059	133892535	NM_177802.3	Slc7a15	NP_808470.1	ILMN_3163103	000630647	A	666	CGGCTGTGGCTTTACTGCTGGTCATCCCGGGAAACTTCAGCACCTTTGTG	12	-	8541197-8541246	12qA1.1	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 (Slc7a15), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Arpat; 9030221C07Rik; 2010001P20Rik	Arpat; 9030221C07Rik; 2010001P20Rik
Mus musculus	RefSeq	ILMN_215929	ILMN_215929	SLC7A15	NM_177802.3	NM_177802.3		328059	133892535	NM_177802.3	Slc7a15	NP_808470.1	ILMN_2665340	003520056	S	1781	CTATCTATTTCTGGCAATTAGATGAAATTTGTCTATGGTAATTCTTCTCG	12	-	8535365-8535414	12qA1.1	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 (Slc7a15), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Arpat; 9030221C07Rik; 2010001P20Rik	Arpat; 9030221C07Rik; 2010001P20Rik
Mus musculus	MEEBO	ILMN_215142	ILMN_215142	OLFR914	scl37087.1.1_78				22129280	NM_146786	Olfr914		ILMN_2655997	002140703	S	647	TTCTTATGGCTTTATCCTCTCCAATATCCTCAAAATAAGGTCCACTTCAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192096	ILMN_231813	OLFR70	NM_019485.1	NM_019485.1		56014	11464982	NM_019485.1	Olfr70	NP_062358.1	ILMN_2654660	000150546	S	585	GCTGATATTAACGGTGGCCACAGCTGTCCTGACAATGACCCCGCTCCTGC	4	-	43709409-43709458	4qB1	Mus musculus olfactory receptor 70 (Olfr70), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence TAS]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR262-10; mOR6	MOR262-10; mOR6
Mus musculus	RefSeq	ILMN_227555	ILMN_227555	EG665646	NR_002884.2	NR_002884.2		665646	90652791	NR_002884.2	EG665646		ILMN_3050077	000110364	I	920	GACAGCTATAACAACGGAGGAGGCAGAGACGGCTTTGGCGGTGGAAGCAA	18	+	27757999-27758048	18qA2	Mus musculus predicted gene, EG665646 (EG665646) on chromosome 18. XM_898778 XM_898788 XM_898794 XM_898803 XM_906889 XM_920051 XM_920060 XM_920070 XM_920078 XM_920086 XM_920091 XM_920100 XM_920108 XM_920117					
Mus musculus	RefSeq	ILMN_198472	ILMN_227555	EG665646	NR_002884.2	NR_002884.2		665646	90652791	NR_002884.2	EG665646		ILMN_1238402	004120047	S	894	GTGGCTATGGTGGGAGTGGCAGCTATGACAGCTATAACAACGGAGGAGGC	18	+	27757973-27758022	18qA2	Mus musculus predicted gene, EG665646 (EG665646) on chromosome 18. XM_898778 XM_898788 XM_898794 XM_898803 XM_906889 XM_920051 XM_920060 XM_920070 XM_920078 XM_920086 XM_920091 XM_920100 XM_920108 XM_920117					
Mus musculus	RefSeq	ILMN_185829	ILMN_185829	USP10	NM_009462.1	NM_009462.1		22224	6678492	NM_009462.1	Usp10	NP_033488.1	ILMN_2868188	001510546	S	2920	GCTGGTTCCTAATAGGAAACACATTTTAACGATTACGAGAGGGAAACCGC	8	+	122481141-122481190	8qE1	Mus musculus ubiquitin specific peptidase 10 (Usp10), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	2610014N07Rik; Uchrp; UBPO; mKIAA0190	2610014N07Rik; Uchrp; UBPO; mKIAA0190
Mus musculus	RefSeq	ILMN_185829	ILMN_185829	USP10	NM_009462.1	NM_009462.1		22224	6678492	NM_009462.1	Usp10	NP_033488.1	ILMN_1217931	000050296	S	2113	GCGCTTTGTCTATGAGAAGACAGGTGGATGCCAGAAGCTGGTCAAGAACA	8	+	122478751-122478800	8qE1	Mus musculus ubiquitin specific peptidase 10 (Usp10), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	2610014N07Rik; Uchrp; UBPO; mKIAA0190	2610014N07Rik; Uchrp; UBPO; mKIAA0190
Mus musculus	RefSeq	ILMN_185829	ILMN_185829	USP10	NM_009462.1	NM_009462.1		22224	6678492	NM_009462.1	Usp10	NP_033488.1	ILMN_2443129	005050743	S	2848	GACAAAAACGAGCCAGTCGTCATTAGAGATCGCTCTTACTTCAAAAGGAA	8	+	122481069-122481118	8qE1	Mus musculus ubiquitin specific peptidase 10 (Usp10), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	2610014N07Rik; Uchrp; UBPO; mKIAA0190	2610014N07Rik; Uchrp; UBPO; mKIAA0190
Mus musculus	RefSeq	ILMN_196614	ILMN_196614	D330050I23RIK	NM_207269.1	NM_207269.1			46402292	NM_207269.1	D330050I23Rik		ILMN_2525025	006560170	S	2243	CTGAAGCTCTGGAAAGGGATAATAAGCAAGACCCCGTGGAACACGTACAA										
Mus musculus	Riken	ILMN_202450	ILMN_202450	4930513H15RIK	ri|4930513H15|PX00033H19|AK015781|1999					AK015781	4930513H15Rik		ILMN_2549707	006250253	S	933	GTGCAGGGGACATGAAAGTGGCAGAAAATGAGACCAGGGGTGCTGACTGC										
Mus musculus	MEEBO	ILMN_223115	ILMN_223115	B430319H21RIK	scl41435.2.1_184	XM_126190.1			20881262	XM_126190.1	B430319H21Rik		ILMN_2759531	001510148	S	669	AAGTGTGTTTTAGCAAATTCATGCAGGAAACAGTATATGGGATATATTTT										
Mus musculus	MEEBO	ILMN_191716	ILMN_191716	PIT1	scl49000.8.1_109				40254621	NM_008849	Pit1		ILMN_2685623	006270170	S	1417	CACTTTCATCCAAAACACTACCAGGAAAGTCCCTCACAACACCCCTTCCA										
Mus musculus	RefSeq	ILMN_210075	ILMN_210075	ADSSL1	NM_007421.1	NM_007421.1		11565	6671518	NM_007421.1	Adssl1	NP_031447.1	ILMN_2958099	001770468	S	1652	CAGAGGCCTTCACTGACTGATTGTCACATGGTATGTGTTCAGTTGGAGCC	12	+	113879469-113879518	12qF1	Mus musculus adenylosuccinate synthetase like 1 (Adssl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways involving a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6163] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [evidence IDA]	Adss1; AI528595; Adss	Adss1; AI528595; Adss
Mus musculus	RefSeq	ILMN_210075	ILMN_210075	ADSSL1	NM_007421.1	NM_007421.1		11565	6671518	NM_007421.1	Adssl1	NP_031447.1	ILMN_1245079	003190689	S	1464	CGAGACCCTCGGCAGTGCCACCAACACCTTCAACGAAACAGTCTGAAGCT	12	+	113879281-113879330	12qF1	Mus musculus adenylosuccinate synthetase like 1 (Adssl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways involving a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6163] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [evidence IDA]	Adss1; AI528595; Adss	Adss1; AI528595; Adss
Mus musculus	RefSeq	ILMN_210075	ILMN_210075	ADSSL1	NM_007421.1	NM_007421.1		11565	6671518	NM_007421.1	Adssl1	NP_031447.1	ILMN_2711688	006220019	S	11	AGCAGAGGAGCTAAGCCAGCATGTCCGGGACCCGAGCCTCCAACGACCGG	12	+	113858310-113858329:113858330-113858359	12qF1	Mus musculus adenylosuccinate synthetase like 1 (Adssl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways involving a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6163] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [evidence IDA]	Adss1; AI528595; Adss	Adss1; AI528595; Adss
Mus musculus	MEEBO	ILMN_224292	ILMN_224292	ING4	scl0001208.1_126				28201949	NM_144510	Ing4		ILMN_2778067	004210168	S	635	ACCACCTCAGAGCGCAGGTTGTAGCTTCCCTTCCTGCGGATGACATTTGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_206349	ILMN_206349	D430015D21RIK	ri|D430015D21|PX00193B08|AK084936|1870					AK084936	D430015D21Rik		ILMN_1248314	005560524	S	1667	GACACTTGGGTGTCTCCATCTTCCCCAGAAGTCTAGGGCCCAATGATAAC										
Mus musculus	RefSeq	ILMN_215673	ILMN_319139	0610040B10RIK	XM_001479510.1	XM_001479510.1		67672	149254466	XM_001479510.1	0610040B10Rik	XP_001479560.1	ILMN_1242334	007330743	S	502	CCATGATCCCTTGTCCCTGGGAGGACTGTCTGAGACATTAGAGAAATGGG					PREDICTED: Mus musculus RIKEN cDNA 0610040B10 gene (0610040B10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215203	ILMN_215203	BC038822	NM_172293.2	NM_172293.2		239647	31982048	NM_172293.2	BC038822	NP_758497.1	ILMN_2804103	004210022	S	1884	GCCCCAGTAGTGTTCTGACTAAGCCTTACCTCTGGATGGGGCCGTGTGAC	15	+	97213409-97213417:97213418-97213458	15qF1	Mus musculus cDNA sequence BC038822 (BC038822), mRNA.				MGC47262	MGC47262
Mus musculus	RefSeq	ILMN_200407	ILMN_200407	LOC383199	XM_356918.1	XM_356918.1			38081704	XM_356918.1	LOC383199		ILMN_1228992	005900603	S	397	GCAGTGGCTGCTTGTGAAGGCTCCCTCCTGCTGATGGCAAGACAACTGTG										
Mus musculus	MEEBO	ILMN_191720	ILMN_191720	GPR155	scl19143.19.1_31				51706206	XM_130346	Gpr155		ILMN_1249003	001230373	S	3	ACATGTCCACACTGTACTTCTAATGCCCAGGGGTACGAGTAAGCCTCAGC								Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191720	ILMN_191720	GPR155	scl19143.19.1_31				51706206	XM_130346	Gpr155		ILMN_1230183	006480670	S	2811	ACCGCGACCTGTGCATCCGAAACATCGTCAGAGAAAGGAGGTGTGGTGCC								Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_242838	ILMN_242838	EG214403	NM_001029977.2	NM_001029977.2		214403	114145727	NM_001029977.2	EG214403	NP_001025148.2	ILMN_3162960	002190408	I	2232	CCGGTGGATTGGAAAGCCAGTATGCAAAGACTCAAGAGGGAAATGTGGGC	1	-	141598537-141598558:141628107-141628134	1qF	Mus musculus predicted gene, EG214403 (EG214403), mRNA.				Cfhrc	Cfhrc
Mus musculus	RefSeq	ILMN_199237	ILMN_248310	ENPP7	NM_001030291.1	NM_001030291.1		238011	71892413	NM_001030291.1	Enpp7	NP_001025462.1	ILMN_2534526	002760228	S	1104	ATGAAGACCATCTTCCGGGCCGTGGGTCCCAGCTTCAAGGCAGGCTTGGA	11	+	118853490-118853539	11qE2	Mus musculus ectonucleotide pyrophosphatase/phosphodiesterase 7 (Enpp7), mRNA.		The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence ISO]	Catalysis of the reaction: a nucleotide + H2O = a nucleoside + phosphate [goid 8252] [evidence ISO]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence ISO]	Gm254; Alk-SMase	Gm254; Alk-SMase
Mus musculus	RefSeq	ILMN_248310	ILMN_248310	ENPP7	NM_001030291.1	NM_001030291.1		238011	71892413	NM_001030291.1	Enpp7	NP_001025462.1	ILMN_3154252	002570088	A	899	GGAGAAAGTTTACAGTGTCCTGAAGGACGCCCACCCCAGGCTGCATGTGT	11	+	118852214-118852263	11qE2	Mus musculus ectonucleotide pyrophosphatase/phosphodiesterase 7 (Enpp7), mRNA.		The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence ISO]	Catalysis of the reaction: a nucleotide + H2O = a nucleoside + phosphate [goid 8252] [evidence ISO]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence ISO]	Gm254; Alk-SMase	Gm254; Alk-SMase
Mus musculus	RefSeq	ILMN_248310	ILMN_248310	ENPP7	NM_001030291.1	NM_001030291.1		238011	71892413	NM_001030291.1	Enpp7	NP_001025462.1	ILMN_3075190	002070639	I	1295	CCACTTGGTGGCGTTGTTGTGCAGGAGCCAGAACACAGCAGCATCTGGAT	11	+	118853879-118853897:118854099-118854129	11qE2	Mus musculus ectonucleotide pyrophosphatase/phosphodiesterase 7 (Enpp7), mRNA.		The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence ISO]	Catalysis of the reaction: a nucleotide + H2O = a nucleoside + phosphate [goid 8252] [evidence ISO]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence ISO]	Gm254; Alk-SMase	Gm254; Alk-SMase
Mus musculus	RefSeq	ILMN_211716	ILMN_240074	GAS5	NR_002840.2	NR_002840.2		14455	144226204	NR_002840.2	Gas5		ILMN_2680850	006330348	S	2494	ATAGAAGATGGTGTCAGATATATTGTGTTAAAATTTTACCATTAAAGTGT	1	+	162968608-162968657	1qH2.1	Mus musculus growth arrest specific 5 (Gas5), non-coding RNA. XR_000433 XR_000434 XR_000435 XR_000436 XR_000472 XR_000473 XR_000474 XR_000475 XR_000476				Gas-5; MGC6251	Gas-5; MGC6251
Mus musculus	RefSeq	ILMN_209975	ILMN_209975	BIRC3	NM_007464.2	NM_007464.2		11796	141803312	NM_007464.2	Birc3	NP_031490.1	ILMN_1247999	000870008	S	2476	GGCATTTATGGTTCAGAAACTAGAATCTTCTCCCGTTGCTTTAAGAACCG	9	-	7848840-7848889	9qA1	Mus musculus baculoviral IAP repeat-containing 3 (Birc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RNF49; Api2; MIHC; MIAP2; IAP2; MIHB; MIAP1; Birc2; HIAP2; Api1; cIAP-2; IAP1; AW107670; cIAP-1; cIAP1; cIAP2	RNF49; Api2; MIHC; MIAP2; IAP2; MIHB; MIAP1; Birc2; HIAP2; Api1; cIAP-2; IAP1; AW107670; cIAP-1; cIAP1; cIAP2
Mus musculus	RefSeq	ILMN_209158	ILMN_209158	MRGPRA3	NM_153067.1	NM_153067.1		233222	23346466	NM_153067.1	Mrgpra3	NP_694707.1	ILMN_1226770	005820121	S	1183	CCAAAGCTCTCCACTGACTTAGTATTTATACCTCTCCCAAACAATAGCAT	7	-	54844381-54844430	7qB4	Mus musculus MAS-related GPR, member A3 (Mrgpra3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Mrga3	Mrga3
Mus musculus	RefSeq	ILMN_216725	ILMN_224930	EG668139	XR_001627.1	XR_001627.1		668139	94380919	XR_001627.1	EG668139		ILMN_2674520	006760286	S	1349	GGTGCAAGTGTAAATATAGAAAACTCTCATTCAAAAGGAGCATCTTACCT	7	-	113653917-113653966	7qE3	PREDICTED: Mus musculus predicted gene, EG668139 (EG668139), misc RNA.					
Mus musculus	RefSeq	ILMN_220066	ILMN_220066	4921504I05RIK	NM_025719.1	NM_025719.1		66707	13385175	NM_025719.1	4921504I05Rik	NP_079995.1	ILMN_2717190	004490594	S	828	AGTCGATGAGTGCAGAGAGCATGGATTTAATAGGCCCAGAAGCACCTGTG	13	-	21475075-21475124	13qA3.1	Mus musculus RIKEN cDNA 4921504I05 gene (4921504I05Rik), mRNA.				RP23-298F22.1; MGC118265	RP23-298F22.1; MGC118265
Mus musculus	RefSeq	ILMN_220066	ILMN_220066	4921504I05RIK	NM_025719.1	NM_025719.1		66707	13385175	NM_025719.1	4921504I05Rik	NP_079995.1	ILMN_2904577	002060114	S	1145	CCAAGAAGAGAGGCGGAAGAGAGAAAATAAGATCCTAGCCAGCTTTCGAG	13	-	21474758-21474807	13qA3.1	Mus musculus RIKEN cDNA 4921504I05 gene (4921504I05Rik), mRNA.				RP23-298F22.1; MGC118265	RP23-298F22.1; MGC118265
Mus musculus	RefSeq	ILMN_185994	ILMN_252871	DFFA	NM_001025296.1	NM_001025296.1		13347	70608118	NM_001025296.1	Dffa	NP_001020467.1	ILMN_2704900	004050239	S	750	GAAGAGCTGGATGCAGTTGACACAGGCGTCGGCAGAGAGATGGCTTCGGA	4	+	148491901-148491950	4qE2	Mus musculus DNA fragmentation factor, alpha subunit (Dffa), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IMP]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	ICAD-L; DFF35; ICAD-S; Dff45; ICAD; A330085O09Rik	ICAD-L; DFF35; ICAD-S; Dff45; ICAD; A330085O09Rik
Mus musculus	RefSeq	ILMN_185994	ILMN_252871	DFFA	NM_001025296.1	NM_001025296.1		13347	70608118	NM_001025296.1	Dffa	NP_001020467.1	ILMN_1249164	000460309	S	1764	TACCACTGTGAAACTCCGTTCCATTTTCTAATATGTTTTGCCAGCAGGGG	4	+	148494070-148494119	4qE2	Mus musculus DNA fragmentation factor, alpha subunit (Dffa), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IMP]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	ICAD-L; DFF35; ICAD-S; Dff45; ICAD; A330085O09Rik	ICAD-L; DFF35; ICAD-S; Dff45; ICAD; A330085O09Rik
Mus musculus	RefSeq	ILMN_258284	ILMN_258284	PLB1	NM_001081407.1	NM_001081407.1		665270	124487226	NM_001081407.1	Plb1	NP_001074876.1	ILMN_3109753	007330068	A	845	CAAGCCAGTGTCACCTGTGTCCCTCTGCTCAGCAGAAAAGTCACTTGATG	5	+	32578493-32578527:32583472-32583486	5qB1	Mus musculus phospholipase B1 (Plb1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]	MGC40917; 4930433E17Rik; BC033606; 4930539A06Rik; 4632413E21Rik	MGC40917; 4930433E17Rik; BC033606; 4930539A06Rik; 4632413E21Rik
Mus musculus	RefSeq	ILMN_258284	ILMN_258284	PLB1	NM_001081407.1	NM_001081407.1		665270	124487226	NM_001081407.1	Plb1	NP_001074876.1	ILMN_3036004	001110327	I	7	GCAGTAGAAGCCAGCACTCACACTCTGTTGAGACAAGCAGTGGGAGAAGG	5	+	32541463-32541512	5qB1	Mus musculus phospholipase B1 (Plb1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]	MGC40917; 4930433E17Rik; BC033606; 4930539A06Rik; 4632413E21Rik	MGC40917; 4930433E17Rik; BC033606; 4930539A06Rik; 4632413E21Rik
Mus musculus	RefSeq	ILMN_195994	ILMN_258284	PLB1	NM_001081407.1	NM_001081407.1		665270	124487226	NM_001081407.1	Plb1	NP_001074876.1	ILMN_2626470	002750484	S	1255	GAACCAGTGGGTCAAAAGGATGGGCTACTCAATACTGCAGAGAGAAAGAC	5	+	32592215-32592264	5qB1	Mus musculus phospholipase B1 (Plb1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]	MGC40917; 4930433E17Rik; BC033606; 4930539A06Rik; 4632413E21Rik	MGC40917; 4930433E17Rik; BC033606; 4930539A06Rik; 4632413E21Rik
Mus musculus	RefSeq	ILMN_216696	ILMN_258284	PLB1	NM_001081407.1	NM_001081407.1		665270	124487226	NM_001081407.1	Plb1	NP_001074876.1	ILMN_2674163	002140348	S	4732	GGGAACTAGGTACTGAACAGTAATTAAGTAACCTCAGGGATGGGGACTGC	5	+	32666608-32666616:32666617-32666657	5qB1	Mus musculus phospholipase B1 (Plb1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]	MGC40917; 4930433E17Rik; BC033606; 4930539A06Rik; 4632413E21Rik	MGC40917; 4930433E17Rik; BC033606; 4930539A06Rik; 4632413E21Rik
Mus musculus	RefSeq	ILMN_194410	ILMN_312137	1700022K14RIK	XM_001477126.1	XM_001477126.1		74234	149253733	XM_001477126.1	1700022K14Rik	XP_001477176.1	ILMN_2506188	006760431	S	713	CCTCACTGCCAAATTCAGAAACTTGTACAAAAGAAGCAGTGTGCTATGTT				5qC3.1	PREDICTED: Mus musculus RIKEN cDNA 1700022K14 gene (1700022K14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198207	ILMN_198207	LOC381111	XM_355029.1	XM_355029.1			38082898	XM_355029.1	LOC381111		ILMN_2530857	006130706	S	198	ACATCAGAATCAGCAGCGCCGCCAACAGGAGAATATGCAGCGTCGGAGTC										
Mus musculus	RefSeq	ILMN_212215	ILMN_212215	CLEC2E	NM_153506.2	NM_153506.2		232409	46048317	NM_153506.2	Clec2e	NP_705726.2	ILMN_2679704	002470554	S	1880	AGCCAGCATCACCTCCTCCTTCATGTCTCCATTTGGTTCCTGGGACTGTT	6	-	129057789-129057838	6qF3	Mus musculus C-type lectin domain family 2, member e (Clec2e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Clra	Clra
Mus musculus	RefSeq	ILMN_220719	ILMN_244980	KLHL20	NM_001039482.1	NM_001039482.1		226541	87116678	NM_001039482.1	Klhl20	NP_001034571.1	ILMN_2725780	006380390	S	3955	ACATGTATCATTTATGCTTTTTTCTAGCATGTATAACTTTTTAAAATAAA	1	-	163018541-163018590	1qH2.1	Mus musculus kelch-like 20 (Drosophila) (Klhl20), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA4210; D930050H05Rik; MGC28950; Kleip; AI504637; mKIAA4210	KIAA4210; D930050H05Rik; MGC28950; Kleip; AI504637; mKIAA4210
Mus musculus	Riken	ILMN_202669	ILMN_202669	A930035O15RIK	ri|A930035O15|PX00067I14|AK020932|641					AK020932	A930035O15Rik		ILMN_1235551	004900392	S	211	CCGCAGGTTGCGGGACAGGGGAGACACGGACTGAGTTTTTTCCCTTAACC										
Mus musculus	RefSeq	ILMN_220184	ILMN_220184	TAS2R125	NM_207027.1	NM_207027.1		387352	46309604	NM_207027.1	Tas2r125	NP_996910.1	ILMN_1213409	005910278	S	674	CAGCTGCACATATAAAGGCCTTGCACATGGTAGTGGCCTTTCTCCTGTTC	6	+	132860342-132860391	6qG1	Mus musculus taste receptor, type 2, member 125 (Tas2r125), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC130081; MGC130082; mt2r59; T2R26; Tas2r25; mGR25	MGC130081; MGC130082; mt2r59; T2R26; Tas2r25; mGR25
Mus musculus	RefSeq	ILMN_198153	ILMN_231615	HSPA1B	NM_010478.2	NM_010478.2		15511	124339825	NM_010478.2	Hspa1b	NP_034608.2	ILMN_2530672	003450035	S	245	CGGCGATCGGCATCGACCTGGGCACCACCTACTCGTGCGTGGGCGTGTTC	17	-	35096120-35096169	17qB1	Mus musculus heat shock protein 1B (Hspa1b), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hsp70.1; hsp68; Hsp70; Hsp70-1	Hsp70.1; hsp68; Hsp70; Hsp70-1
Mus musculus	RefSeq	ILMN_193552	ILMN_231615	HSPA1B	NM_010478.2	NM_010478.2		15511	124339825	NM_010478.2	Hspa1b	NP_034608.2	ILMN_2498263	004040670	S	2560	ACGTCTTGGCACTGTGTACTACATAACTTTACTCTTTTGTACTTAAAACT	17	-	35094759-35094808	17qB1	Mus musculus heat shock protein 1B (Hspa1b), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hsp70.1; hsp68; Hsp70; Hsp70-1	Hsp70.1; hsp68; Hsp70; Hsp70-1
Mus musculus	RefSeq	ILMN_185873	ILMN_185873	UMPS	NM_009471.2	NM_009471.2		22247	142374909	NM_009471.2	Umps	NP_033497.1	ILMN_1213014	004540373	S	212	GCGGGGATCAGTTTTGACAGTGTGTGTGGAGTTCCTTATACAGCGTTACC	16	-	33963928-33963977	16qB3	Mus musculus uridine monophosphate synthetase (Umps), mRNA.		The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]; The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4588] [evidence IEA]; Catalysis of the reaction: orotidine 5'-phosphate = UMP + CO2 [goid 4590] [evidence IEA]	1700095D23Rik; AA408257; BB164745; AL033308	1700095D23Rik; AA408257; BB164745; AL033308
Mus musculus	RefSeq	ILMN_185873	ILMN_185873	UMPS	NM_009471.2	NM_009471.2		22247	142374909	NM_009471.2	Umps	NP_033497.1	ILMN_1254813	005910215	S	3096	CTGGAGATGTCTCCAATGTTTACTCCATAAATAAGATGCTCCCCAGTGGC	16	-	33955171-33955220	16qB3	Mus musculus uridine monophosphate synthetase (Umps), mRNA.		The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]; The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4588] [evidence IEA]; Catalysis of the reaction: orotidine 5'-phosphate = UMP + CO2 [goid 4590] [evidence IEA]	1700095D23Rik; AA408257; BB164745; AL033308	1700095D23Rik; AA408257; BB164745; AL033308
Mus musculus	RefSeq	ILMN_233518	ILMN_233518	GM1381	NM_001033478.1	NM_001033478.1		384198	85702012	NM_001033478.1	Gm1381	NP_001028650.1	ILMN_2990669	006940433	S	628	TTCAACCTTTAAAGAGCAGCTTCAGGAGCAGGGGGAGCTGTTTGCAGGCC	5	+	93014407-93014437:93016542-93016560	5qE2	Mus musculus gene model 1381, (NCBI) (Gm1381), mRNA.					
Mus musculus	RefSeq	ILMN_213016	ILMN_213016	RNF8	NM_021419.1	NM_021419.1		58230	23956111	NM_021419.1	Rnf8	NP_067394.1	ILMN_2651534	004880324	S	1788	CAACGTGTGCTGGGACCCTGCTCGGACTGCCTGACTGTGCATTAAATGAG	17	+	29778361-29778410	17qA3.3	Mus musculus ring finger protein 8 (Rnf8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AIP37; 3830404E21Rik	AIP37; 3830404E21Rik
Mus musculus	RefSeq	ILMN_213016	ILMN_213016	RNF8	NM_021419.1	NM_021419.1		58230	23956111	NM_021419.1	Rnf8	NP_067394.1	ILMN_1214110	001030440	S	281	CCAGCTGATATCAAAGGTTTGCCCTCTGATGATTTCCCGAAGCCACTGTG	17	+	29758486-29758535	17qA3.3	Mus musculus ring finger protein 8 (Rnf8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AIP37; 3830404E21Rik	AIP37; 3830404E21Rik
Mus musculus	RefSeq	ILMN_188185	ILMN_188185	TRFR2	NM_015799.3	NM_015799.3		50765	113204629	NM_015799.3	Trfr2	NP_056614.3	ILMN_1227831	003840026	S	1460	CAAGTCTGCAGTGGGGACTGCCATCCTGCTGGAGCTGGTTCGGACCTTCT	5	+	138016116-138016164:138016264-138016264	5qG2	Mus musculus transferrin receptor 2 (Trfr2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with transferrin to initiate a change in cell activity [goid 4998] [evidence TAS]	Tfr2	Tfr2
Mus musculus	RefSeq	ILMN_188185	ILMN_188185	TRFR2	NM_015799.3	NM_015799.3		50765	113204629	NM_015799.3	Trfr2	NP_056614.3	ILMN_2450491	005720356	S	2541	AACTTTTGAAGCCAAAAGCCCTCCATGGGCCCCACGTGATTCTCCTTTCT	5	+	138023854-138023899:138023986-138023989	5qG2	Mus musculus transferrin receptor 2 (Trfr2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with transferrin to initiate a change in cell activity [goid 4998] [evidence TAS]	Tfr2	Tfr2
Mus musculus	RefSeq	ILMN_185390	ILMN_246680	SLAMF6	NM_030710.2	NM_030710.2		30925	133892889	NM_030710.2	Slamf6	NP_109635.1	ILMN_2740678	005720349	S	2182	GACCTCAACTTAAATACATCATCTTCTATAAAAGACCTTCCCAGTGCAGT	1	+	173873738-173873787	1qH3	Mus musculus SLAM family member 6 (Slamf6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NTB-A; SF2000; KAL1b; NTBA; Ly108; KAL1	NTB-A; SF2000; KAL1b; NTBA; Ly108; KAL1
Mus musculus	RefSeq	ILMN_199659	ILMN_315257	EG664855	XM_001474296.1	XM_001474296.1		664855	149265230	XM_001474296.1	EG664855	XP_001474346.1	ILMN_1243733	006200364	S	662	ACCACCTGGTGATGACCGACCACAAGAAGATGCGCCAGGAGATCTGTGAG				14qA3	PREDICTED: Mus musculus predicted gene, EG664855 (EG664855), mRNA.					
Mus musculus	RefSeq	ILMN_212418	ILMN_212418	MGMT	NM_008598.2	NM_008598.2		17314	114326520	NM_008598.2	Mgmt	NP_032624.1	ILMN_2876448	003890072	S	481	CTCGTGCAGTAGGAGGAGCAATGAGAAGCAATCCGGTCCCCATCCTCATC	7	+	144313277-144313311:144319568-144319582	7qF4	Mus musculus O-6-methylguanine-DNA methyltransferase (Mgmt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The repair of alkylation damage, e.g. the removal of the alkyl group at the O6-position of guanine by O6-alkylguanine-DNA alkyltransferase (AGT) [goid 6307] [evidence IDA]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: DNA (containing 6-O-methylguanine) + (protein)-L-cysteine = DNA (without 6-O-methylguanine) + protein S-methyl-L-cysteine [goid 3908] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IDA]	AGT; Agat; MGC107020; AI267024	AGT; Agat; MGC107020; AI267024
Mus musculus	RefSeq	ILMN_222225	ILMN_226803	ES31	XM_915050.2	XM_915050.2		382053	94384281	XM_915050.2	Es31	XP_920143.1	ILMN_1240872	006220554	S	789	CGCAGAGTGGGGTTGTCATCAGCAAGATTCTGGAAGACTTGAATGCATGG				8qD3	PREDICTED: Mus musculus esterase 31, transcript variant 5 (Es31), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	Riken	ILMN_203403	ILMN_203403	ODZ2	ri|5930427L24|PX00055L07|AK031198|2716					AK031198	Odz2		ILMN_1213049	005960609	S	2584	CCAAGCAAAGCCATCTTCATGTTGCCCCCTTCACTGGGGTGCTGAGACAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]			
Mus musculus	RefSeq	ILMN_210233	ILMN_210233	CACNB1	NM_145121.1	NM_145121.1		12295	41281727	NM_145121.1	Cacnb1	NP_660099.1	ILMN_2603539	000020100	S	1491	AGACACCTTTGATGCTGACACCCCCGGCAGCCGAAATTCTGCCTACACGG	11	-	97864468-97864517	11qD	Mus musculus calcium channel, voltage-dependent, beta 1 subunit (Cacnb1), transcript variant variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 15270] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IGI]	Cchlb1; Cchb1	Cchlb1; Cchb1
Mus musculus	MEEBO	ILMN_196014	ILMN_196014	BB128963	scl32579.16_26				27370093	NM_172742	BB128963		ILMN_2605307	005570240	S	2966	GACCCTGCGGTGACAGAAGAGGTAAGCGTGGCTGTGAGCAGCATACCAAA										
Mus musculus	MEEBO	ILMN_224219	ILMN_224219	MYB	scl0003829.1_169				19526472	NM_033597	Myb		ILMN_1231769	006960088	S	1840	AGACTCACCCCAAGCGAGGCACAGCAAGGTTCCGCTGGTCGTCCTACGAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204518	ILMN_204518	B230334I05RIK	ri|B230334I05|PX00160K03|AK046024|1560					AK046024	B230334I05Rik		ILMN_1252005	004490767	S	1331	AGTTCTAACTCTGGGACCCACCCACATGGAGGGAGTGCTGACTCTTGCAA										
Mus musculus	RefSeq	ILMN_191326	ILMN_260317	4933404M02RIK	NM_025744.2	NM_025744.2		66748	124244076	NM_025744.2	4933404M02Rik	NP_080020.2	ILMN_1249756	000780653	S	659	GAGTGCGGAGCGGGGCTGGCCTTCCTGGTCTGCCCTTCGAGGAAACAACT	2	+	70347534-70347583	2qC2	Mus musculus RIKEN cDNA 4933404M02 gene (4933404M02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209984	ILMN_209984	DAB1	NM_177259.3	NM_177259.3		13131	70909360	NM_177259.3	Dab1	NP_796233.2	ILMN_2601072	001450240	S	4949	AGACTTTTTTGATAACTCGTATCCATCCCAGTGTCTACAGAAACCCCATC	4	+	104417101-104417150	4qC6	Mus musculus disabled homolog 1 (Drosophila) (Dab1), transcript variant 2, mRNA.	Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IGI]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IMP]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence TAS]; The interaction between two cells that modulates the association of a neuronal cell and a glial cell involved in glial-mediated radial cell migration in the cerebral cortex [goid 21813] [evidence IMP]; The process that contributes to the act of creating the structural organization of the cerebellum. This process pertains to the physical shaping of a rudimentary structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21589] [evidence IMP]; The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain [goid 21799] [evidence IMP]; The migration of postmitotic Purkinje cells along radial glial cells from the ventricular zone to the Purkinje cell layer [goid 21942] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence TAS]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	scm; scr; yot; scrambler; C630028C02Rik; AI956902	scm; scr; yot; scrambler; C630028C02Rik; AI956902
Mus musculus	RefSeq	ILMN_211693	ILMN_211693	BC046404	NM_198861.1	NM_198861.1		192976	38524603	NM_198861.1	BC046404	NP_942561.1	ILMN_3079442	001990747	I	41	CAACAGTTCCCCCAAAGTTGCGGCCGGGGAGGCGCGAAGCCGGCGGGGGA	11	-	62461935-62461984	11qB2	Mus musculus cDNA sequence BC046404 (BC046404), mRNA.				MGC59632	MGC59632
Mus musculus	RefSeq	ILMN_211693	ILMN_211693	BC046404	NM_198861.1	NM_198861.1		192976	38524603	NM_198861.1	BC046404	NP_942561.1	ILMN_2618590	006130291	S	534	GAAGCTGTGCCGGCAGCTGACCTACCACCTTAGCCCTCATTCACAGTGGA	11	-	62422742-62422791	11qB2	Mus musculus cDNA sequence BC046404 (BC046404), mRNA.				MGC59632	MGC59632
Mus musculus	RefSeq	ILMN_211693	ILMN_211693	BC046404	NM_198861.1	NM_198861.1		192976	38524603	NM_198861.1	BC046404	NP_942561.1	ILMN_3158698	003390326	A	1899	GCTGAGACTGCCCAGAAGTTTACAGTGCTGAAGCTGGACTGCCTAACACC	11	-	62418421-62418470	11qB2	Mus musculus cDNA sequence BC046404 (BC046404), mRNA.				MGC59632	MGC59632
Mus musculus	Riken	ILMN_203489	ILMN_203489	CMKBR2	ri|B430108F19|PX00070N12|AK046579|2267					AK046579	Cmkbr2		ILMN_1222795	000240168	S	1873	CACCCCTTATTCCCCTATTCAGGTGGATGGCTGCCCTATGAAGGACTGTG										
Mus musculus	RefSeq	ILMN_211689	ILMN_211689	PRKD3	NM_029239.2	NM_029239.2		75292	27753988	NM_029239.2	Prkd3	NP_083515.2	ILMN_1241452	006560221	S	1326	CAACTGCCATAAACGCTGTGCATCCAAAGTACCAAGAGACTGCCTTGGCG	17	-	79374082-79374131	17qE3	Mus musculus protein kinase D3 (Prkd3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	5730497N19Rik; MGC47171; 4930557O20Rik; PKD3	5730497N19Rik; MGC47171; 4930557O20Rik; PKD3
Mus musculus	RefSeq	ILMN_211689	ILMN_211689	PRKD3	NM_029239.2	NM_029239.2		75292	27753988	NM_029239.2	Prkd3	NP_083515.2	ILMN_1221007	006760538	S	4062	CGTCTTACACTTCAGCTCCAACAGCCAGCTGTTTTGTAGTAGTTATTAAT	17	-	79350150-79350199	17qE3	Mus musculus protein kinase D3 (Prkd3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	5730497N19Rik; MGC47171; 4930557O20Rik; PKD3	5730497N19Rik; MGC47171; 4930557O20Rik; PKD3
Mus musculus	RefSeq	ILMN_211689	ILMN_211689	PRKD3	NM_029239.2	NM_029239.2		75292	27753988	NM_029239.2	Prkd3	NP_083515.2	ILMN_2834728	007510673	S	4278	CCCACCTGTGCTTTACCCAAAGAGAAAAAGATCCAGGACCATCCTCTCAC	17	-	79349934-79349983	17qE3	Mus musculus protein kinase D3 (Prkd3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	5730497N19Rik; MGC47171; 4930557O20Rik; PKD3	5730497N19Rik; MGC47171; 4930557O20Rik; PKD3
Mus musculus	RefSeq	ILMN_215949	ILMN_215949	CTS6	NM_021445.1	NM_021445.1		58518	10946819	NM_021445.1	Cts6	NP_067420.1	ILMN_2665568	007560056	S	1102	CAGCATTTCCACAGTAATGTCATCCACTTCAATGACCAGCCTTCCCTTGC	13	-	61296679-61296728	13qB2	Mus musculus cathepsin 6 (Cts6), mRNA.				MGC117650; 1600022N02Rik	MGC117650; 1600022N02Rik
Mus musculus	RefSeq	ILMN_210278	ILMN_210278	PRKRA	NM_011871.2	NM_011871.2		23992	118130007	NM_011871.2	Prkra	NP_036001.1	ILMN_3161021	003890097	S	1297	CCACAAGGCTGAGTGTGGTTTTCATTTTACAGGGTCAGACGCATAGGTTG	2	-	76468201-76468250	2qC3	Mus musculus protein kinase, interferon inducible double stranded RNA dependent activator (Prkra), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; The process by which the anatomical structures of the outer ear are generated and organized. Morphogenesis pertains to the creation of form. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull [goid 42473] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	RAX; Pact; AV120107	RAX; Pact; AV120107
Mus musculus	RefSeq	ILMN_191002	ILMN_191002	TOB1	NM_009427.2	NM_009427.2		22057	61676218	NM_009427.2	Tob1	NP_033453.2	ILMN_1250011	004250131	S	1414	GCGGCCTACGGAGGCCTCAACGAGAAGTCTTTTGTAGACGGCTTGAATTT	11	+	94075935-94075984	11qD	Mus musculus transducer of ErbB-2.1 (Tob1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	 [goid 7184] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IDA]	Trob; Tob	Trob; Tob
Mus musculus	RefSeq	ILMN_197156	ILMN_197156	LOC380838	XM_358439.1	XM_358439.1			38074347	XM_358439.1	LOC380838		ILMN_2527116	002470731	S	338	ACCGGGCTTCACTACTCTCCCCTGTGAGAACCGTCAGTGGTGAGCAAATG										
Mus musculus	RefSeq	ILMN_197969	ILMN_236695	EG625060	XM_889601.2	XM_889601.2		625060	94400114	XM_889601.2	EG625060	XP_894694.1	ILMN_1222038	006770347	S	546	ACAACGGGCACCTTGGAGTGTGAAGCTGGAGCGCGCAGCTGAAGCCCTGA	16	+	20929404-20929453	16qB1	PREDICTED: Mus musculus predicted gene, EG625060 (EG625060), mRNA.					
Mus musculus	RefSeq	ILMN_213356	ILMN_213356	OLFR1046	NM_146582.2	NM_146582.2		258575	147902548	NM_146582.2	Olfr1046	NP_666793.2	ILMN_2636238	000070110	S	824	AAATGGCCTCTGTGTTTTATACACTAGTCATTCCTATGCTCAATCCATTG				2qD	Mus musculus olfactory receptor 1046 (Olfr1046), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR194-1	MOR194-1
Mus musculus	RefSeq	ILMN_195010	ILMN_195010	WNT2B	NM_009520.3	NM_009520.3		22414	118130343	NM_009520.3	Wnt2b	NP_033546.2	ILMN_2512976	004830202	S	285	GCGTGCCCGCGTCCCCGTGCCCAGACCCACGGCCCCCGACGTGTCCCCAT	3	-	104764293-104764342	3qF2.2	Mus musculus wingless related MMTV integration site 2b (Wnt2b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	Wnt13	Wnt13
Mus musculus	RefSeq	ILMN_195010	ILMN_195010	WNT2B	NM_009520.3	NM_009520.3		22414	118130343	NM_009520.3	Wnt2b	NP_033546.2	ILMN_2814768	004010719	S	3282	TAGAGTCAACGGGATAACTGATGAGCCAGTGGTGGGGTCACGGAGGGGGG	3	-	104747964-104748013	3qF2.2	Mus musculus wingless related MMTV integration site 2b (Wnt2b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	Wnt13	Wnt13
Mus musculus	RefSeq	ILMN_197612	ILMN_311696	LOC666233	XR_035685.1	XR_035685.1		666233	149265511	XR_035685.1	LOC666233		ILMN_1254982	001300646	S	808	GCAGCAGTTGTGAAATACTCCAGCAGAAACTGGAACATGGAAGAGACCAG	14	+	42891122-42891128:42903439-42903481	14qB	PREDICTED: Mus musculus similar to Predicted gene, EG434459 (LOC666233), misc RNA.					
Mus musculus	RefSeq	ILMN_253110	ILMN_253110	OTTMUSG00000002038	NM_001007584.1	NM_001007584.1		432589	56090518	NM_001007584.1	OTTMUSG00000002038	NP_001007585.1	ILMN_2883500	004390102	S	1452	CACACTGGGTCTTCCCCCGAGACCCTCACTGTGGGCTTGTCAATCTATAG	11	-	94510767-94510816	11qD	Mus musculus predicted gene, OTTMUSG00000002038 (OTTMUSG00000002038), mRNA.				RP23-290B5.6	RP23-290B5.6
Mus musculus	RefSeq	ILMN_210856	ILMN_210856	RUNX1T1	NM_009822.1	NM_009822.1		12395	6753299	NM_009822.1	Runx1t1	NP_033952.1	ILMN_1230714	005810154	S	201	GCCCAGCACCCTGCCTCGGGCCATGCCGCCCCAGCCCCTCTGATGGCCCT	4	+	13712129-13712178	4qA1	Mus musculus runt-related transcription factor 1; translocated to, 1 (cyclin D-related) (Runx1t1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 51101] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	MTG8; ETO; Cbfa2t1h	MTG8; ETO; Cbfa2t1h
Mus musculus	RefSeq	ILMN_210856	ILMN_210856	RUNX1T1	NM_009822.1	NM_009822.1		12395	6753299	NM_009822.1	Runx1t1	NP_033952.1	ILMN_2662450	000130603	S	3219	TTACCCATATGCCCACATTTAGTCTCTTTATTCCTAGTTGGTGAGAAACC	4	+	13818166-13818215	4qA1	Mus musculus runt-related transcription factor 1; translocated to, 1 (cyclin D-related) (Runx1t1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 51101] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	MTG8; ETO; Cbfa2t1h	MTG8; ETO; Cbfa2t1h
Mus musculus	Riken	ILMN_202410	ILMN_202410	1700012M13RIK	ri|1700012M13|ZX00036J16|AK005924|1026					AK005924	1700012M13Rik		ILMN_1251618	006330113	S	885	TTCCTAGAACCTACACGGTTGACGGGAAGAACCAGCTCCCTCAGGTGTCC										
Mus musculus	RefSeq	ILMN_196742	ILMN_196742	HIST1H2AC	NM_178189.3	NM_178189.3		319164	142381322	NM_178189.3	Hist1h2ac	NP_835496.1	ILMN_2666418	002000075	S	2414	GGGCCAGGTGTTAAAACTTGACAGTATGTGAACAGCTGAAGTCTCAGCCG	13	-	23773365-23773414	13qA3.1	Mus musculus histone cluster 1, H2ac (Hist1h2ac), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	9030420B16	9030420B16
Mus musculus	RefSeq	ILMN_213459	ILMN_319865	4930562F07RIK	XM_001472682.1	XM_001472682.1		75255	149245243	XM_001472682.1	4930562F07Rik	XP_001472732.1	ILMN_2637219	000130053	S	662	TATTAACACTCAATATACAAAGTGTACACAATTAATCAATAACCTTTAAC	1	-	162004984-162005033	1qH2.1	PREDICTED: Mus musculus RIKEN cDNA 4930562F07 gene (4930562F07Rik), mRNA.					
Mus musculus	MEEBO	ILMN_222664	ILMN_222664	4933432B09RIK	scl46957.20.1_114	XM_128197.3			38077918	XM_128197.3	4933432B09Rik		ILMN_2753120	005670026	S	2299	ATGCGGTAGAAAGCGGATTCAGCAATGGCAACTGAGAGCTCTGATGCAGC										
Mus musculus	RefSeq	ILMN_240739	ILMN_240739	OLFR951	NM_001011812.1	NM_001011812.1		258046	58801389	NM_001011812.1	Olfr951	NP_001011812.1	ILMN_2817092	006560767	S	772	GGTGTATTCGTGTACTTACAGCCATCACAAGTGAGTTCAATGGACCAAGG	9	+	39202149-39202198	9qA5.1	Mus musculus olfactory receptor 951 (Olfr951), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-33P; MOR171-49	MOR171-33P; MOR171-49
Mus musculus	RefSeq	ILMN_213996	ILMN_213996	GIMAP5	NM_175035.5	NM_175035.5		317757	111161512	NM_175035.5	Gimap5	NP_778200.1	ILMN_2701332	001980048	S	161	ACCTGTAAGGGTAAAGAGGAACCCGCCAGGGCGCTGACAGCCGCTTGGGA	6	+	48696356-48696405	6qB2.3	Mus musculus GTPase, IMAP family member 5 (Gimap5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	D630024P16; E230026N22Rik	D630024P16; E230026N22Rik
Mus musculus	RefSeq	ILMN_213996	ILMN_213996	GIMAP5	NM_175035.5	NM_175035.5		317757	111161512	NM_175035.5	Gimap5	NP_778200.1	ILMN_2643096	005130291	S	1679	GCAGGGTAGGTCTTATCCCAGAAAAAGCAGGGTCAGCAGTCAAGAATCAC	6	+	48703935-48703984	6qB2.3	Mus musculus GTPase, IMAP family member 5 (Gimap5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	D630024P16; E230026N22Rik	D630024P16; E230026N22Rik
Mus musculus	RefSeq	ILMN_196173	ILMN_250718	MARK2	NM_001080390.1	NM_001080390.1		13728	122937356	NM_001080390.1	Mark2	NP_001073859.1	ILMN_2689887	003610156	S	2944	GGGCTCCCCCTCGGTACTGCGGTTGCACAGAGTATTTCGCCTAAACCAAG	19	-	7351263-7351312	19qA	Mus musculus MAP/microtubule affinity-regulating kinase 2 (Mark2), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region that lies just beneath the plasma membrane on the basal edge of a cell [goid 45180] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA4207; AU024026; Emk; KIAA4207; Par-1	mKIAA4207; AU024026; Emk; KIAA4207; Par-1
Mus musculus	RefSeq	ILMN_191754	ILMN_240564	TSP50	NM_146227.4	NM_146227.4		235631	146149122	NM_146227.4	Tsp50	NP_666339.2	ILMN_1245792	004220594	S	1191	GAAGAGCGAGGCCCCACCCATCTTTCTGCAGGTCTCCTACTACAGGCCCT				9qF3	Mus musculus testes-specific protease 50 (Tsp50), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	79H19C	79H19C
Mus musculus	RefSeq	ILMN_217163	ILMN_217163	NEFL	NM_010910.1	NM_010910.1		18039	39204498	NM_010910.1	Nefl	NP_035040.1	ILMN_2679784	001470634	S	1785	TCCAGATCCTATACAAATTAAGAAGTCAATACATGTATAATTCTGAGATG	14	+	68705578-68705627	14qD1	Mus musculus neurofilament, light polypeptide (Nefl), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter [goid 5883] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The regrowth of axons outside the central nervous system (outside the brain and spinal cord) following an axonal injury [goid 14012] [evidence IMP]; Any process that modulates the rate, direction or extent of axon growth such that the correct diameter is attained and maintained [goid 31133] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IGI]; The formation of the bundles of intermediate filaments, known as tonofilaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs [goid 45110] [evidence IGI]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IMP]; The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites [goid 48812] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process that modulates the rate, direction or extent of axon growth such that the correct diameter is attained and maintained [goid 31133] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	NF68; CMT2E; NF-L; AI847934; Nfl	NF68; CMT2E; NF-L; AI847934; Nfl
Mus musculus	RefSeq	ILMN_215006	ILMN_215006	DDOST	NM_007838.2	NM_007838.2		13200	46195797	NM_007838.2	Ddost	NP_031864.2	ILMN_2941677	004920020	S	1848	GCTGGCCTAAGAATTGCTGCTGAAGAGACCCGAGAGGGACTGGAAAGATG	4	+	137868279-137868328	4qD3	Mus musculus dolichyl-di-phosphooligosaccharide-protein glycotransferase (Ddost), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220173	ILMN_220173	TCHHL1	NM_027762.3	NM_027762.3		71325	153791447	NM_027762.3	Tchhl1	NP_082038.2	ILMN_2718552	006760564	S	1970	GCAGAGAGTTTGGAGGCCCAGTGAGTCTACTGAATGTTGATCTGTTTGGC				3qF2.1	Mus musculus trichohyalin-like 1 (Tchhl1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	S100a17; 5430400H23Rik; Thhl1; AA589420	S100a17; 5430400H23Rik; Thhl1; AA589420
Mus musculus	Riken	ILMN_201716	ILMN_201716	2400002C23RIK	ri|2400002C23|ZX00041A23|AK010251|980					AK010251	2400002C23Rik		ILMN_1252750	001410209	S	728	GGTGACACACTCGTCCAGAGGGAAATAGAGACACTCACCCTGCAGATGGC										
Mus musculus	RefSeq	ILMN_200758	ILMN_200758	LOC381855	XM_355866.1	XM_355866.1			38085932	XM_355866.1	LOC381855		ILMN_1255369	005220762	S	464	CTGACACCTACATCAGCAGAACTATCTCGATGGTCAACTGCGGGCCCCCC										
Mus musculus	RefSeq	ILMN_197244	ILMN_241851	LOC218298	XM_905201.1	XM_905201.1		218298	82951151	XM_905201.1	LOC218298	XP_910294.1	ILMN_1227156	005290100	S	1527	ACAGCACTGTGGCTCTAAAAGACGCTTGGATAGCAGTCACACCAAGGTAG				13qB3	PREDICTED: Mus musculus similar to Nuclear protein SkiP (Ski-interacting protein) (SNW1 protein) (Nuclear receptor coactivator NCoA-62) (LOC218298), mRNA.					
Mus musculus	RefSeq	ILMN_221293	ILMN_221293	B430306N03RIK	NM_177083.4	NM_177083.4		320148	146198562	NM_177083.4	B430306N03Rik	NP_796057.1	ILMN_2733567	002630433	S	3383	GCTAACCTCTCCTTTATGCCTCAGGGGCATCTCAGGTCACCTCAGTGAGA				17qC	Mus musculus RIKEN cDNA B430306N03 gene (B430306N03Rik), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Treml6	Treml6
Mus musculus	RefSeq	ILMN_209201	ILMN_242441	MIB2	NM_145124.2	NM_145124.2		76580	110347530	NM_145124.2	Mib2	NP_660106.2	ILMN_2769393	006770630	S	3602	CACTCCACACGCCGTGGCTGATCGCAGACCTTCCTTCAAAACCCCTGTAT	4	-	155028810-155028859	4qE2	Mus musculus mindbomb homolog 2 (Drosophila) (Mib2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	skd; Zzank1; 2210008I11Rik	skd; Zzank1; 2210008I11Rik
Mus musculus	RefSeq	ILMN_185183	ILMN_249781	ITGB5	NM_010580.1	NM_010580.1		16419	6754379	NM_010580.1	Itgb5	NP_034710.1	ILMN_2663613	001770152	S	2857	GCCAGACAAGAAGGTATCCGGAAGAGTCTGTGTGTACAAAGCTAGCGCGC	16	+	33949122-33949171	16qB3	Mus musculus integrin beta 5 (Itgb5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IPI]	[b]5A; AA475909; [b]5B; [b]5; ESTM23; AI874634; beta-5; beta5; [b]-5	[b]5A; AA475909; [b]5B; [b]5; ESTM23; AI874634; beta-5; beta5; [b]-5
Mus musculus	Riken	ILMN_207247	ILMN_207247	F830010E04RIK	ri|F830010E04|PL00005I07|AK089711|1796					AK089711	F830010E04Rik		ILMN_1243680	002750754	S	1587	GAGTTCATTATGTACCCGAGGAAAGCAGGCACTGGCACCCAGTCAGCTGC										
Mus musculus	Riken	ILMN_206276	ILMN_206276	D630008I10RIK	ri|D630008I10|PX00196P03|AK085301|2212					AK085301	D630008I10Rik		ILMN_1236701	001030040	S	2023	GGCTTGCTGGAGAAGTATGTCGCTGGGAGCTGGGTTTGGGTGTTTACAGC										
Mus musculus	RefSeq	ILMN_214889	ILMN_214889	2010005J08RIK	NM_178623.3	NM_178623.3		72046	117938769	NM_178623.3	2010005J08Rik	NP_848738.2	ILMN_1219459	004640402	S	4189	GGTGATCTGCTGGTAGGTCTGGCCGTGTGCGGATGAGAAAAGCAATCCTG	11	-	5614296-5614345	11qA1	Mus musculus RIKEN cDNA 2010005J08 gene (2010005J08Rik), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	9130001I21Rik; mKIAA1507; RP23-385C16.7; AW060359	9130001I21Rik; mKIAA1507; RP23-385C16.7; AW060359
Mus musculus	RefSeq	ILMN_214889	ILMN_214889	2010005J08RIK	NM_178623.3	NM_178623.3		72046	117938769	NM_178623.3	2010005J08Rik	NP_848738.2	ILMN_3128270	002570259	A	4100	ATCTGGAACCCTTTCTTGAACCAAGGGCCCACTGCACTCCTCTACTGGCC	11	-	5614385-5614434	11qA1	Mus musculus RIKEN cDNA 2010005J08 gene (2010005J08Rik), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	9130001I21Rik; mKIAA1507; RP23-385C16.7; AW060359	9130001I21Rik; mKIAA1507; RP23-385C16.7; AW060359
Mus musculus	RefSeq	ILMN_199439	ILMN_199439	MRGPRX1	NM_207540.2	NM_207540.2		404242	142351339	NM_207540.2	Mrgprx1	NP_997423.1	ILMN_1233345	002760632	S	844	CTGTGGCCTGCCTCTTGGGCTTTACTTGTTCCTGTTATACTGGTTTGGGG	7	-	55276631-55276680	7qB4	Mus musculus MAS-related GPR, member X1 (Mrgprx1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Mrgprc11; MrgC11	Mrgprc11; MrgC11
Mus musculus	RefSeq	ILMN_196514	ILMN_196514	A230106M20	XM_357746.1	XM_357746.1			38086668	XM_357746.1	A230106M20		ILMN_2524603	007320736	S	518	AATACGAATGCGTTACTCACAACGGAGTGAACTCGGCGCCCGACAGCCGC										
Mus musculus	RefSeq	ILMN_195070	ILMN_260361	HIST1H4I	NM_175656.2	NM_175656.2		319158	67972651	NM_175656.2	Hist1h4i	NP_783587.1	ILMN_1232524	006250541	S	91	AAGTGCTTCGGGACAACATCCAGGGCATCACCAAGCCCGCCATCCGCCGC	13	-	22133081-22133130	13qA3.1	Mus musculus histone cluster 1, H4i (Hist1h4i), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213948	ILMN_213948	PVALB	NM_013645.3	NM_013645.3		19293	118130845	NM_013645.3	Pvalb	NP_038673.2	ILMN_1218223	005340064	S	463	CTCCCCCATCCTCTATGGCCCTCGGATGACGCCATTCTTCTGGAAATGCT	15	-	78021938-78021987	15qE1	Mus musculus parvalbumin (Pvalb), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	PV; Pva	PV; Pva
Mus musculus	Riken	ILMN_202546	ILMN_202546	2810440N09RIK	ri|2810440N09|ZX00083G08|AK013278|1733					AK013278	2810440N09Rik		ILMN_1241896	003710228	S	1375	GAGAGCTAGCAACCTGCAATGAGGGCAGACTGAGGATAGAAGTTGGTTTG										
Mus musculus	RefSeq	ILMN_212273	ILMN_242715	FCNB	NM_010190.1	NM_010190.1		14134	77404439	NM_010190.1	Fcnb	NP_034320.1	ILMN_2663083	000940484	S	854	GCCTCTACCTGAGGGGTCCCCATAAGAGCTATGCAAATGGTGTCAACTGG	2	-	27932157-27932206	2qA3	Mus musculus ficolin B (Fcnb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	MGC130138; MGC130137	MGC130138; MGC130137
Mus musculus	RefSeq	ILMN_212273	ILMN_242715	FCNB	NM_010190.1	NM_010190.1		14134	77404439	NM_010190.1	Fcnb	NP_034320.1	ILMN_2624630	001820671	S	637	GCCAAGTACAGCTCCTTCCAGATCCAGGGAGAGGCCGAGAAATACAAGCT	2	-	27933798-27933847	2qA3	Mus musculus ficolin B (Fcnb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	MGC130138; MGC130137	MGC130138; MGC130137
Mus musculus	RefSeq	ILMN_215438	ILMN_215438	PHF11	NM_172603.2	NM_172603.2		219131	142351633	NM_172603.2	Phf11	NP_766191.1	ILMN_1225451	001410201	S	649	GGCTGTGGATTGTTTGGAGACACACTAAGAAAATTCCAAGAAGTAATCAA	14	-	59896399-59896406:59898184-59898225	14qC3	Mus musculus PHD finger protein 11 (Phf11), mRNA.				4933417L10Rik	4933417L10Rik
Mus musculus	RefSeq	ILMN_215438	ILMN_215438	PHF11	NM_172603.2	NM_172603.2		219131	142351633	NM_172603.2	Phf11	NP_766191.1	ILMN_2696492	001340193	S	1277	CCCTGGGTTTATGCTCACTATCATACCAGATTGCCAATATTTAGCACACT	14	-	59895771-59895820	14qC3	Mus musculus PHD finger protein 11 (Phf11), mRNA.				4933417L10Rik	4933417L10Rik
Mus musculus	MEEBO	ILMN_191768	ILMN_191768	E330009E22RIK	scl00320567.1_21						E330009E22Rik		ILMN_2481999	005080612	S	20	CCCATTACAGAGGCTCCTCTTACCCAGTTTGTGAGCTTGTCAGACTTCTC										
Mus musculus	Riken	ILMN_204932	ILMN_204932	D130099D04RIK	ri|D130099D04|PX00187M10|AK051805|1507					AK051805	D130099D04Rik		ILMN_1255633	001340435	S	1191	GCTCAGGGCCAGGGTCAGGGTCAGAGTGAGGGTCAATTTCGGTTCTGGTT										
Mus musculus	RefSeq	ILMN_201231	ILMN_201231	LOC382096	XM_356177.1	XM_356177.1			38090010	XM_356177.1	LOC382096		ILMN_1250676	000150068	S	304	ACTTCATCCTAAAGCATGTGGTCTTTGGGAAGGTGAAAGAAGGCATGAAC										
Mus musculus	RefSeq	ILMN_215788	ILMN_215788	JDP2	NM_030887.2	NM_030887.2		81703	31982607	NM_030887.2	Jdp2	NP_112149.2	ILMN_2663585	005860717	S	1491	TCCACCCACCAGTTAAGGCCATTGTAATTCCTAAGTACTGTAGGCTCTGG	12	+	86980676-86980725	12qD2	Mus musculus Jun dimerization protein 2 (Jdp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Jdp2; Jundp2; TIF	Jdp2; Jundp2; TIF
Mus musculus	RefSeq	ILMN_211697	ILMN_211697	COL3A1	NM_009930.1	NM_009930.1		12825	33859525	NM_009930.1	Col3a1	NP_034060.1	ILMN_1258629	002230544	S	4642	GAATACAATTTTTTGCTGTTTCAACCACCCAATACAGGTCAAATGCTTTT	1	+	45405737-45405786	1qC1.1	Mus musculus collagen, type III, alpha 1 (Col3a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A collagen homotrimer of alpha1(III) chains; type III collagen triple helices associate to form fibrils [goid 5586] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48565] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]	AW550625; KIAA4231; Ms10w; mKIAA4231; MMS10-W; Col3a-1	AW550625; KIAA4231; Ms10w; mKIAA4231; MMS10-W; Col3a-1
Mus musculus	RefSeq	ILMN_211697	ILMN_211697	COL3A1	NM_009930.1	NM_009930.1		12825	33859525	NM_009930.1	Col3a1	NP_034060.1	ILMN_2683958	005340692	S	268	TGTGACTCAGGATCTGTCCTTTGCGATGACATAATCTGTGATGAGGAGCC	1	+	45378422-45378471	1qC1.1	Mus musculus collagen, type III, alpha 1 (Col3a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A collagen homotrimer of alpha1(III) chains; type III collagen triple helices associate to form fibrils [goid 5586] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48565] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]	AW550625; KIAA4231; Ms10w; mKIAA4231; MMS10-W; Col3a-1	AW550625; KIAA4231; Ms10w; mKIAA4231; MMS10-W; Col3a-1
Mus musculus	RefSeq	ILMN_212094	ILMN_217627	PCDHGB4	NM_033576.1	NM_033576.1		93701	18087736	NM_033576.1	Pcdhgb4	NP_291054.1	ILMN_1241991	002190669	S	4141	CAGTAGTGTAGAAGATCCCCCTCCCCCGCTGGTGTAGAATAGCCAATAGT	18	+	38001185-38001234	18qB3	Mus musculus protocadherin gamma subfamily B, 4 (Pcdhgb4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210343	ILMN_210343	ESR1	NM_007956.4	NM_007956.4		13982	145966838	NM_007956.4	Esr1	NP_031982.1	ILMN_2604666	000510280	S	4190	TTCAGGGCAGCTAATTTTGCTTTTACCAAAATATCTGTAGTAATATTTTT				10qA1	Mus musculus estrogen receptor 1 (alpha) (Esr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of mitosis. Mitosis is the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 45839] [evidence NAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence NAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]	ESR; ER[a]; ER-alpha; ERalpha; AA420328; Estra; AU041214; Nr3a1; ERa; Estr	ESR; ER[a]; ER-alpha; ERalpha; AA420328; Estra; AU041214; Nr3a1; ERa; Estr
Mus musculus	RefSeq	ILMN_210343	ILMN_210343	ESR1	NM_007956.4	NM_007956.4		13982	145966838	NM_007956.4	Esr1	NP_031982.1	ILMN_2726412	006290471	S	4117	CACATGCCTATTGCTGGGTGTTGAATGACAGACAATCTTATGTAGCAGAG				10qA1	Mus musculus estrogen receptor 1 (alpha) (Esr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of mitosis. Mitosis is the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 45839] [evidence NAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence NAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]	ESR; ER[a]; ER-alpha; ERalpha; AA420328; Estra; AU041214; Nr3a1; ERa; Estr	ESR; ER[a]; ER-alpha; ERalpha; AA420328; Estra; AU041214; Nr3a1; ERa; Estr
Mus musculus	RefSeq	ILMN_210175	ILMN_210175	KLRB1A	NM_010737.2	NM_010737.2		17057	31981643	NM_010737.2	Klrb1a	NP_034867.2	ILMN_2602983	007200768	S	939	CTGGGACTCTTACAGATGCCCATGTGTAGTTTCTCTATTCTGTAAAGGAG	6	-	128559421-128559470	6qF3	Mus musculus killer cell lectin-like receptor subfamily B member 1A (Klrb1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	NKR-P1 2; Nkrp1-a; NKR-P1A; Ly55a	NKR-P1 2; Nkrp1-a; NKR-P1A; Ly55a
Mus musculus	RefSeq	ILMN_220779	ILMN_314438	B230209E15RIK	XM_001478598.1	XM_001478598.1		319752	149257339	XM_001478598.1	B230209E15Rik	XP_001478648.1	ILMN_2726742	001500403	S	1481	CCTCAAGTTCTTCAGCTCCTTTCCTACTTTCATGCCATCATTAAGCCCCT				7qC	PREDICTED: Mus musculus RIKEN cDNA B230209E15 gene (B230209E15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212852	ILMN_212852	MDH1	NM_008618.2	NM_008618.2		17449	31982177	NM_008618.2	Mdh1	NP_032644.2	ILMN_2631021	000630356	S	1164	GAGCCTAGTACCAAACAGTAATAATGCTACATTCAAATTGTGAACAGCAA	11	-	21459198-21459229:21459195-21459212	11qA3.1	Mus musculus malate dehydrogenase 1, NAD (soluble) (Mdh1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reversible conversion of pyruvate or oxaloacetate to malate [goid 16615] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+. Also oxidizes some other 2-hydroxydicarboxylic acids [goid 30060] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	D17921; Mor-2; Mor2; B230377B03Rik; MDH-s; MDHA	D17921; Mor-2; Mor2; B230377B03Rik; MDH-s; MDHA
Mus musculus	RefSeq	ILMN_212852	ILMN_212852	MDH1	NM_008618.2	NM_008618.2		17449	31982177	NM_008618.2	Mdh1	NP_032644.2	ILMN_2655677	000240593	S	397	CCTACTGAAAGCCAATGTGAAAATCTTCAAATCCCAGGGCACAGCCTTGG	11	-	21464169-21464218	11qA3.1	Mus musculus malate dehydrogenase 1, NAD (soluble) (Mdh1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reversible conversion of pyruvate or oxaloacetate to malate [goid 16615] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+. Also oxidizes some other 2-hydroxydicarboxylic acids [goid 30060] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	D17921; Mor-2; Mor2; B230377B03Rik; MDH-s; MDHA	D17921; Mor-2; Mor2; B230377B03Rik; MDH-s; MDHA
Mus musculus	RefSeq	ILMN_212852	ILMN_212852	MDH1	NM_008618.2	NM_008618.2		17449	31982177	NM_008618.2	Mdh1	NP_032644.2	ILMN_2891176	000510156	S	1450	AGGAAGCCCAATCAATTTCAGAGGGATCCCATTACTTAAGTCCTTAAAGG	11	-	21457949-21457998	11qA3.1	Mus musculus malate dehydrogenase 1, NAD (soluble) (Mdh1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reversible conversion of pyruvate or oxaloacetate to malate [goid 16615] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+. Also oxidizes some other 2-hydroxydicarboxylic acids [goid 30060] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	D17921; Mor-2; Mor2; B230377B03Rik; MDH-s; MDHA	D17921; Mor-2; Mor2; B230377B03Rik; MDH-s; MDHA
Mus musculus	RefSeq	ILMN_248110	ILMN_248110	LPIN1	NM_172950.2	NM_172950.2		14245	68510036	NM_172950.2	Lpin1	NP_766538.2	ILMN_3111744	003890609	A	4343	GTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCTTCTGCCACCACGGTG	12	-	16543564-16543613	12qA1.1	Mus musculus lipin 1 (Lpin1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; Any process that modulates the frequency, rate or extent of adipocyte differentiation [goid 45598] [evidence IMP]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell [goid 31529] [evidence IMP]	Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]	fld; 4631420P06; Kiaa0188; mKIAA0188	fld; 4631420P06; Kiaa0188; mKIAA0188
Mus musculus	RefSeq	ILMN_194582	ILMN_248110	LPIN1	NM_172950.2	NM_172950.2		14245	68510036	NM_172950.2	Lpin1	NP_766538.2	ILMN_2592546	004890192	S	3728	AGCCGTCATGAATGCATTAAAAGTTAAGTGTGATAGACAGTCCAAAGAGC	12	-	16544179-16544228	12qA1.1	Mus musculus lipin 1 (Lpin1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; Any process that modulates the frequency, rate or extent of adipocyte differentiation [goid 45598] [evidence IMP]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell [goid 31529] [evidence IMP]	Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]	fld; 4631420P06; Kiaa0188; mKIAA0188	fld; 4631420P06; Kiaa0188; mKIAA0188
Mus musculus	MEEBO	ILMN_188928	ILMN_188928	TRBV31_X03277_T_CELL_RECEPTOR_BETA_VARIABLE_31_33	TRBV31_X03277_T_cell_receptor_beta_variable_31_33						TRBV31_X03277_T_cell_receptor_beta_variable_31_33		ILMN_2456911	002690022	S	20	CTCAGACTATCCATCAATGGCCAGTTGCCGAGATCAAGGCTGTGGGCAGC										
Mus musculus	RefSeq	ILMN_214335	ILMN_214335	PRKCDBP	NM_028444.1	NM_028444.1		109042	22324937	NM_028444.1	Prkcdbp	NP_082720.1	ILMN_2956942	003290195	S	749	GGAGCCAGAACCTCCTCAACCTACCAAGGAAGATCCTGAGAAACCCGTGC	7	-	112629357-112629406	7qE3	Mus musculus protein kinase C, delta binding protein (Prkcdbp), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		MGC6598; 3110015B12Rik; SRBC; 6330514M23Rik	MGC6598; 3110015B12Rik; SRBC; 6330514M23Rik
Mus musculus	RefSeq	ILMN_214335	ILMN_214335	PRKCDBP	NM_028444.1	NM_028444.1		109042	22324937	NM_028444.1	Prkcdbp	NP_082720.1	ILMN_1243602	006280682	S	363	TTGGAGGCCAACCACGGGCTGCTGGTGGCGCGCGGGAAGCTGCACGTCCT	7	-	112630299-112630348	7qE3	Mus musculus protein kinase C, delta binding protein (Prkcdbp), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		MGC6598; 3110015B12Rik; SRBC; 6330514M23Rik	MGC6598; 3110015B12Rik; SRBC; 6330514M23Rik
Mus musculus	RefSeq	ILMN_188274	ILMN_188274	VCAM1	NM_011693.2	NM_011693.2		22329	31981429	NM_011693.2	Vcam1	NP_035823.2	ILMN_2778655	002850575	S	2822	CCGTCGCGAGGTTGTTTAGAGTAGCAGCACTCCATATGCAGGTCAGAACG	3	-	115813464-115813513	3qG1	Mus musculus vascular cell adhesion molecule 1 (Vcam1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD106; Vcam-1	CD106; Vcam-1
Mus musculus	RefSeq	ILMN_211222	ILMN_211222	KIF26B	NM_177757.3	NM_177757.3		269152	34328422	NM_177757.3	Kif26b	NP_808425.2	ILMN_2835384	002970402	S	5152	GACTCTTACCTTGCGGCTGTGGGAAAGGGGAGGGTGACATGGGATTACCA	1	+	180862651-180862700	1qH4	Mus musculus kinesin family member 26B (Kif26b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	BC056349; 4832420M10	BC056349; 4832420M10
Mus musculus	RefSeq	ILMN_209247	ILMN_209247	EIF4E2	NM_023314.3	NM_023314.3		26987	85677505	NM_023314.3	Eif4e2	NP_075803.2	ILMN_2766616	000780242	S	1140	CCGGTGCTGGGTCTGAGCTGAGCGTTATCAGTATTATGAATGCTTGCACA	1	+	89134809-89134858	1qD	Mus musculus eukaryotic translation initiation factor 4E member 2 (Eif4e2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D0H0S6743E; Eif4el3; 2700069E09Rik; AV129531; AI036339	D0H0S6743E; Eif4el3; 2700069E09Rik; AV129531; AI036339
Mus musculus	RefSeq	ILMN_217238	ILMN_217238	ALG12	NM_145477.1	NM_145477.1		223774	21703941	NM_145477.1	Alg12	NP_663452.1	ILMN_2680686	003850500	S	1279	GAAAACAGCAAAGACCAGGGACTTCCAGCATGTCTACAGCATGCCTGGTG	15	-	88636138-88636187	15qE3	Mus musculus asparagine-linked glycosylation 12 homolog (yeast, alpha-1,6-mannosyltransferase) (Alg12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P [goid 6488] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 30] [evidence ISA]	ECM39; MGC29374	ECM39; MGC29374
Mus musculus	RefSeq	ILMN_217238	ILMN_217238	ALG12	NM_145477.1	NM_145477.1		223774	21703941	NM_145477.1	Alg12	NP_663452.1	ILMN_2869182	003120079	S	1687	CACCAATCATGGCAGCTGTTATAGCCCGAGGCATGTTATCTCCATTTCAG	15	-	88635730-88635779	15qE3	Mus musculus asparagine-linked glycosylation 12 homolog (yeast, alpha-1,6-mannosyltransferase) (Alg12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P [goid 6488] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 30] [evidence ISA]	ECM39; MGC29374	ECM39; MGC29374
Mus musculus	RefSeq	ILMN_259737	ILMN_259737	LSM5	NM_025520.2	NM_025520.2		66373	42476201	NM_025520.2	Lsm5	NP_079796.1	ILMN_2971946	006420605	S	258	GCTGGTTCCCGGAGGAGAAGGGCCTGAAGTATGAATGGATTTCCTCGACG	6	-	56651234-56651250:56651251-56651283	6qB3	Mus musculus LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]	2310034K10Rik; 2010208O10Rik	2310034K10Rik; 2010208O10Rik
Mus musculus	RefSeq	ILMN_201438	ILMN_328931	EG668643	XM_001480825.1	XM_001480825.1		668643	149274458	XM_001480825.1	EG668643	XP_001480875.1	ILMN_1244671	007510722	S	1891	GCCTTTGCACAACTCAGTAGTCTCCAACGTCATAAAAGAACACATACTGG					PREDICTED: Mus musculus predicted gene, EG668643 (EG668643), mRNA.					
Mus musculus	RefSeq	ILMN_212622	ILMN_311304	LOC100045782	XM_001475154.1	XM_001475154.1		100045782	149253440	XM_001475154.1	LOC100045782	XP_001475204.1	ILMN_2628551	003450332	S	3184	GGTAGCTGTTCTCCATGAGACACGGCTGCTCACAGGTCCCTTTGAGTGGC					PREDICTED: Mus musculus similar to leucine rich repeat containing 47 (LOC100045782), mRNA.					
Mus musculus	RefSeq	ILMN_201103	ILMN_201103	LOC382002	XM_356064.1	XM_356064.1			38089144	XM_356064.1	LOC382002		ILMN_2541088	001050482	S	730	AGCTACCCAAGGCTGTGCAAACCCAGATGATGCCACCAAGGGCCACAGGT										
Mus musculus	Riken	ILMN_203933	ILMN_203933	A130069J03RIK	ri|A130069J03|PX00124J14|AK037988|1913					AK037988	A130069J03Rik		ILMN_1238145	002000025	S	1678	AGACTGCCGCTGGGCTGAGTGGTGATACTTTTGTTTCCTGAGAGACGGAG										
Mus musculus	Riken	ILMN_204088	ILMN_204088	B130063I11RIK	ri|B130063I11|PX00158A18|AK045299|2871					AK045299	B130063I11Rik		ILMN_1247658	006290672	S	2503	GAGGATTAATACAGGTCAGCGAGAGCAAAGCACCTAACAATGGTGCCAGG										
Mus musculus	RefSeq	ILMN_200177	ILMN_200177	LOC385646	XM_358837.1	XM_358837.1			38080806	XM_358837.1	LOC385646		ILMN_1228133	004250176	S	732	ATCCACTGAGCGATGGGTGTCACCAGGGAACTGGATACACAACTGCAGGC										
Mus musculus	MEEBO	ILMN_210100	ILMN_210100	B830004H01RIK	scl24744.1.1704_72	NM_177127.2			31342865	NM_177127.2	B830004H01Rik		ILMN_2602221	000670142	S	1980	GAATAGCTTCCCGTGACTCAGGATAGCCAAAAGTTTCCATGGAGTCCGGG										
Mus musculus	RefSeq	ILMN_201574	ILMN_201574	PANK	XM_129260.1	XM_129260.1			20888772	XM_129260.1	Pank		ILMN_2542951	004250133	S	458	ATCGGAAGATCGGGGAACGGCCGACCGTGACCTCCAGCGAGGCTGCCAGA										
Mus musculus	MEEBO	ILMN_191756	ILMN_191756	PLXNC1	scl37589.32_358				9055375	NM_018797	Plxnc1		ILMN_2481902	005050072	S	19	CACAGAATGTCCAAATTAGATGTGTGCTGAAGACAATCAGTCACTGGGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223049	ILMN_223049	EG329763	NM_177860.3	NM_177860.3		329763	141803317	NM_177860.3	EG329763	NP_808528.1	ILMN_2758622	004760121	S	1361	CCATCTTTCTCTGTCATGCTAACCGCTGTCTCAGTGCAGATATATACAGC	3	-	137711979-137712028	3qG3	Mus musculus predicted gene, EG329763 (EG329763), mRNA.				D830013H12	D830013H12
Mus musculus	RefSeq	ILMN_209612	ILMN_209612	GPBP1L1	NM_029868.2	NM_029868.2		77110	42734458	NM_029868.2	Gpbp1l1	NP_084144.2	ILMN_1241795	005260397	S	57	CTCAGACGCCGCGAGTCGTCCTTGACCGTAGCCCCGCCGCTGCCGGAGAT	4	+	116230388-116230433:116241769-116241772	4qD1	Mus musculus GC-rich promoter binding protein 1-like 1 (Gpbp1l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	5330440M15Rik; BC002292; MGC8183; RP23-233B9.6	5330440M15Rik; BC002292; MGC8183; RP23-233B9.6
Mus musculus	RefSeq	ILMN_188849	ILMN_231159	ME3	NM_181407.3	NM_181407.3		109264	141802714	NM_181407.3	Me3	NP_852072.1	ILMN_1236334	003800398	S	4280	CCTGGAGTTAGCAAACACTCTCCAGTTATTTCTCCCACAGAACTCAAACC	7	+	97002779-97002828	7qE1	Mus musculus malic enzyme 3, NADP(+)-dependent, mitochondrial (Me3), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate [goid 4470] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (S)-malate + NADP+ = pyruvate + CO2 + NADPH + H+. Also decarboxylates oxaloacetate [goid 4473] [evidence IEA]	MGC107389; B230207H15Rik; 1700020C08Rik	MGC107389; B230207H15Rik; 1700020C08Rik
Mus musculus	RefSeq	ILMN_213621	ILMN_213621	GADL1	XM_135211.6	XM_135211.6		73748	94386586	XM_135211.6	Gadl1	XP_135211.6	ILMN_2639051	005690403	S	1564	TTCCGCCAGGTGGTCATCAGCCCTCAAGTGAGCCGGGAAGACATGGACTT	9	+	115983142-115983191	9qF3	PREDICTED: Mus musculus glutamate decarboxylase-like 1 (Gadl1), mRNA.		The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]		
Mus musculus	MEEBO	ILMN_224141	ILMN_224141	EXT2	scl18978.15.15_4				6753789	NM_010163	Ext2		ILMN_2775514	006770112	S	2032	GAGACATCAAGAACTGGGTGGATACTCACATGAACTGTGAAGATATTGCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence IEA]; Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50509] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + heparan sulfate = UDP + (N-acetyl-D-glucosaminyl)-heparan sulfate [goid 42328] [evidence IC ]		
Mus musculus	RefSeq	ILMN_219873	ILMN_219873	CYB561	NM_007805.4	NM_007805.4		13056	145966893	NM_007805.4	Cyb561	NP_031831.2	ILMN_1232601	004570397	S	2154	GCTGTAAGGCTAGGGAATCTTAGGAGTTCTGTCGTCGGTTGGCACACTTG				11qE1	Mus musculus cytochrome b-561 (Cyb561), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: 2 Fe2+ + NAD+ = 2 Fe3+ + NADH + H+ [goid 293] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217815	ILMN_217815	PLCB2	scl0018796.1_49	NM_177568.1			46849802	NM_177568.1	Plcb2		ILMN_2687933	004810026	S	2109	GAAAAGAAGGCTAAAAAGCCCACCCCTCTACCTCAACCCCCTTTCCTGAT							The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The series of events required to receive a bitter taste stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50913] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]		
Mus musculus	MEEBO	ILMN_224195	ILMN_224195	MPZ	scl017528.3_10				54262153	NM_008623	Mpz		ILMN_1231021	006650102	S	547	CATGTGATGTCAAAAACCCACCGGACATAGTGGGCAAGACCTCTCAGGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The maintenance of junctions between cells [goid 45217] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208783	ILMN_313573	1110020G09RIK	NM_001085410.1	NM_001085410.1		68646	146134391	NM_001085410.1	1110020G09Rik	NP_001078879.1	ILMN_1237830	004610066	S	2774	TGCATAGACATCGAAATAGACCGTTTATGGAACTTGAGCTTCGTGAGCTC				15qA1	Mus musculus RIKEN cDNA 1110020G09 gene (1110020G09Rik), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: ATP + NAD+ = ADP + NADP+ [goid 3951] [evidence IEA]	4933430B08Rik	4933430B08Rik
Mus musculus	RefSeq	ILMN_187762	ILMN_246041	4632434I11RIK	NM_001080995.1	NM_001080995.1		74041	124430772	NM_001080995.1	4632434I11Rik	NP_001074464.1	ILMN_2446902	004610762	S	202	GAATGTGAGAGGCAGAGGGGATGGAGGACTAATCAACAAGGTCAAGTCAC	7	-	100016624-100016673	7qE1	Mus musculus RIKEN cDNA 4632434I11 gene (4632434I11Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]			
Mus musculus	RefSeq	ILMN_215545	ILMN_246041	4632434I11RIK	NM_001080995.1	NM_001080995.1		74041	124430772	NM_001080995.1	4632434I11Rik	NP_001074464.1	ILMN_2660829	001500519	S	2184	TTGCAGTAGCCCAGAAAGTATAAATACATCGAAAGAGATGCCTTGCAGGC	7	-	100007252-100007301	7qE1	Mus musculus RIKEN cDNA 4632434I11 gene (4632434I11Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]			
Mus musculus	RefSeq	ILMN_197519	ILMN_259074	GM1587	NM_001033440.2	NM_001033440.2		380920	142345793	NM_001033440.2	Gm1587	NP_001028612.1	ILMN_1219781	001050338	S	529	GGCCCTTGGAGGGGGTTTATGACTAACCGTGATTGCCTGCTCCCTCAGAT	14	-	78194527-78194576	14qD3	Mus musculus gene model 1587, (NCBI) (Gm1587), mRNA.					
Mus musculus	RefSeq	ILMN_196839	ILMN_196839	LOC212514	XM_148240.1	XM_148240.1			20892564	XM_148240.1	LOC212514		ILMN_1247662	002190386	S	78	GAATAGTACCATGCAGGTATTTCTGAGGAGGACTGTTCAGACTCGTCCGG										
Mus musculus	Riken	ILMN_207090	ILMN_207090	C530027B15RIK	ri|C530027B15|PX00669A06|AK082974|2567					AK082974	C530027B15Rik		ILMN_1233501	004050204	S	2184	GCCACTCTCTGTGTCACTCTGTGTGTCTGCTACTGATGATGGGGACACTG										
Mus musculus	RefSeq	ILMN_201113	ILMN_201113	LOC384815	XM_357878.1	XM_357878.1			38089245	XM_357878.1	LOC384815		ILMN_1233529	000460609	S	678	GGGCAGTGACCTGACAGCAGTTGTTCTAAGTCTGTTGAGTAATCCTGGCC										
Mus musculus	RefSeq	ILMN_254466	ILMN_254466	LOC626854	NM_001039232.1	NM_001039232.1		626854	85986642	NM_001039232.1	LOC626854	NP_001034321.1	ILMN_3001496	003420114	S	505	GTCTATGATGGTAACCAGTGTCGTAAAACCTTTGCACGACACAGTCAGCT	17	+	17022701-17022719:17024058-17024088	17qA3.1	Mus musculus similar to zinc finger protein 709 (LOC626854), mRNA.					
Mus musculus	RefSeq	ILMN_218783	ILMN_218783	SC4MOL	NM_025436.1	NM_025436.1		66234	13384835	NM_025436.1	Sc4mol	NP_079712.1	ILMN_2823778	006420253	S	1410	CACGAAGTGAGTGTATCACCTGGTGAGCGAGTGACTGAAACCTGCTCTGG	8	-	67610701-67610750	8qB3.1	Mus musculus sterol-C4-methyl oxidase-like (Sc4mol), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 4,4-dimethyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NAD(P)H + H+ + O2 = 4-beta-hydroxymethyl-4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NAD(P)+ + H2O [goid 254] [evidence IEA]	C78600; ERG25; 1500001G16Rik; DESP4	C78600; ERG25; 1500001G16Rik; DESP4
Mus musculus	RefSeq	ILMN_199252	ILMN_254498	EG667604	XM_991409.1	XM_991409.1		667604	94397121	XM_991409.1	EG667604	XP_996503.1	ILMN_1220580	007560215	S	263	CCAGCCAAAGTAGCTCTCTGTCCATCACTGCTGCTCAGTGTGAAGACACT	14	+	53662492-53662541	14qC2	PREDICTED: Mus musculus predicted gene, EG667604 (EG667604), mRNA.					
Mus musculus	MEEBO	ILMN_219280	ILMN_219280	E130010M05RIK	scl00319847.1_110	NM_177015.2			31342600	NM_177015.2	E130010M05Rik		ILMN_1228314	002360161	S	3902	GCGTCACTTTTGCCAAGATGCCCAATCTACTACTAAAGCATACATATTTG										
Mus musculus	RefSeq	ILMN_198916	ILMN_198916	LOC234897	XM_134614.4	XM_134614.4			38089715	XM_134614.4	LOC234897		ILMN_1227643	001260647	S	343	GGGCCTGTGGCATTTCTCCATGAAGCTTATGACCAGAAGAACATCCGGCG										
Mus musculus	RefSeq	ILMN_197444	ILMN_318453	4921531P07RIK	XM_001481289.1	XM_001481289.1		207778	149265266	XM_001481289.1	4921531P07Rik	XP_001481339.1	ILMN_1259834	006110020	S	11367	CCCAAGTCTGAAGCCCCTTGGAAGTTACATCACAGATTTCCTGGCCCGGC				14qA3	PREDICTED: Mus musculus RIKEN cDNA 4921531P07 gene (4921531P07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197445	ILMN_318453	4921531P07RIK	XM_001481289.1	XM_001481289.1		207778	149265266	XM_001481289.1	4921531P07Rik	XP_001481339.1	ILMN_1224130	005860669	S	11874	CTGGATCAAGCGTGGGGTGGCTTTGCTCTGTCAGTTGGATAACTAAGTCG				14qA3	PREDICTED: Mus musculus RIKEN cDNA 4921531P07 gene (4921531P07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196429	ILMN_318453	4921531P07RIK	XM_001481289.1	XM_001481289.1		207778	149265266	XM_001481289.1	4921531P07Rik	XP_001481339.1	ILMN_1218614	001190593	S	2828	TCATGCAGCAGATGCCCGAGGAAGGGCGGCAGTTTCAGACAGTCGACAGA				14qA3	PREDICTED: Mus musculus RIKEN cDNA 4921531P07 gene (4921531P07Rik), mRNA.					
Mus musculus	Riken	ILMN_204074	ILMN_204074	STYX	ri|A730020G18|PX00149F22|AK042741|1730					AK042741	Styx		ILMN_2562157	006110678	S	368	CCCATACTCTTCTGCTATGAAAAGCAAGGGTTTCACTATGTAACTCAAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221611	ILMN_221611	1110012D08RIK	NM_178066.2	NM_178066.2		73827	31342609	NM_178066.2	1110012D08Rik	NP_835167.1	ILMN_1221251	006180736	S	2180	AGCTACTGACCATTCTAACTCTCCCTCCTCTGATTCTCCTGACCAAGATC	10	-	128237197-128237246	10qD3	Mus musculus RIKEN cDNA 1110012D08 gene (1110012D08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210614	ILMN_210614	GULP1	NM_028450.2	NM_028450.2		70676	150456458	NM_028450.2	Gulp1	NP_082726.1	ILMN_2607397	000940703	S	864	TGAAGGAACAGTGTTTTGTCTCGACCCATTAGACAGCAGGTGCTGACGTC				1qC1.1	Mus musculus GULP, engulfment adaptor PTB domain containing 1 (Gulp1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	3110030A04Rik; CED-6; Gulp-2; GULP; Ced6; 5730529O06Rik	3110030A04Rik; CED-6; Gulp-2; GULP; Ced6; 5730529O06Rik
Mus musculus	RefSeq	ILMN_210614	ILMN_210614	GULP1	NM_028450.2	NM_028450.2		70676	150456458	NM_028450.2	Gulp1	NP_082726.1	ILMN_2676463	002600397	S	1984	GCTTCCACAACATTTGCCCATATTATAAAATACTACCAGTGCAGAAAACA				1qC1.1	Mus musculus GULP, engulfment adaptor PTB domain containing 1 (Gulp1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	3110030A04Rik; CED-6; Gulp-2; GULP; Ced6; 5730529O06Rik	3110030A04Rik; CED-6; Gulp-2; GULP; Ced6; 5730529O06Rik
Mus musculus	RefSeq	ILMN_209151	ILMN_209151	C1QTNF3	NM_030888.2	NM_030888.2		81799	31981414	NM_030888.2	C1qtnf3	NP_112150.1	ILMN_2863849	000270671	S	1961	GTGTTATAGAAGGTGCTAGATGGTTTTTGCCTAGCTTTCCCCATCCCAGA	15	+	10924522-10924571	15qA1	Mus musculus C1q and tumor necrosis factor related protein 3 (C1qtnf3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CTRP3; Cors; AI315029; Corcs; CORS-26; 2310005P21Rik	CTRP3; Cors; AI315029; Corcs; CORS-26; 2310005P21Rik
Mus musculus	RefSeq	ILMN_216990	ILMN_216990	ARHGAP4	NM_138630.1	NM_138630.1		171207	20137011	NM_138630.1	Arhgap4	NP_619536.1	ILMN_2677876	007160474	S	2915	GGCCTATTGCTTCACCTCAGCCCTCTTCTAGGTCTCTTGGGAGGTAGCAA	X	-	71144619-71144649:71144744-71144762	XqA7.3	Mus musculus Rho GTPase activating protein 4 (Arhgap4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0131; A530015A20Rik; MGC124367; MGC124368; A130009C12Rik; c1	mKIAA0131; A530015A20Rik; MGC124367; MGC124368; A130009C12Rik; c1
Mus musculus	RefSeq	ILMN_221693	ILMN_221693	OTTMUSG00000004461	NM_173746.2	NM_173746.2		208820	31343438	NM_173746.2	OTTMUSG00000004461	NP_776107.1	ILMN_1229340	004570307	S	1110	CATATGTCCCTAAAGTGGAGTTCCTCGTCTCCTGGGCTGCCTGAACTGGT	4	+	12908265-12908314	4qA1	Mus musculus predicted gene, OTTMUSG00000004461 (OTTMUSG00000004461), mRNA.				C130086A10	C130086A10
Mus musculus	RefSeq	ILMN_187617	ILMN_260493	IGSF10	XM_913941.2	XM_913941.2		242050	94369411	XM_913941.2	Igsf10	XP_919034.1	ILMN_2445658	003390639	S	8776	CGGGCTGCAAACCTAATCTTTCACGTTGTCTCCATTCATTCTGTGTGCGA				3qD	PREDICTED: Mus musculus immunoglobulin superfamily, member 10, transcript variant 4 (Igsf10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence ISA]	Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184829	ILMN_260493	IGSF10	XM_913941.2	XM_913941.2		242050	94369411	XM_913941.2	Igsf10	XP_919034.1	ILMN_1244809	000540307	S	8282	GGCGTCTATAAATGCAGAGCACAGAACGTGCTTGGTGCCGATTATGCAAC				3qD	PREDICTED: Mus musculus immunoglobulin superfamily, member 10, transcript variant 4 (Igsf10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence ISA]	Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199021	ILMN_328905	LOC100043675	XM_001480621.1	XM_001480621.1		100043675	149265778	XM_001480621.1	LOC100043675	XP_001480671.1	ILMN_1245965	000520398	S	135	GCAACCTCATGGAAGGTGGCGGAGGAAGTAGCAACAAATCCACCAGCGGG	14	+	66663909-66663916:66663917-66663958	14qD1	PREDICTED: Mus musculus similar to Translocase of inner mitochondrial membrane 23 homolog (yeast) (LOC100043675), mRNA.					
Mus musculus	RefSeq	ILMN_222440	ILMN_222440	NR5A1	NM_139051.2	NM_139051.2		26423	22296885	NM_139051.2	Nr5a1	NP_620639.1	ILMN_2749611	003830039	S	2253	AGTCCTTGGAAAGTGTGTGAGAGAGAAGTGGGCAGGAGACAGACTGGGGA	2	-	38515274-38515323	2qB	Mus musculus nuclear receptor subfamily 5, group A, member 1 (Nr5a1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IGI]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation [goid 1553] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [evidence IDA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC124277; SF1; Ftz-F1; ELP; SF-1; Ftzf1; Ad4BP; ELP-3; MGC124278	MGC124277; SF1; Ftz-F1; ELP; SF-1; Ftzf1; Ad4BP; ELP-3; MGC124278
Mus musculus	MEEBO	ILMN_220204	ILMN_220204	4930474M22RIK	scl50293.3.1_15	NM_183107.1			34147088	NM_183107.1	4930474M22Rik		ILMN_1250074	001170369	S	524	CTCTGGATGCCTAGGTCTGGTTTCTGGGTGCTGTTCCTCTCTGTCTATTA										
Mus musculus	RefSeq	ILMN_213321	ILMN_213321	LANCL1	NM_021295.2	NM_021295.2		14768	133892201	NM_021295.2	Lancl1	NP_067270.1	ILMN_1226187	001580762	S	861	GCCGGCTGAAGTTTCCTTCCGGCAATTACCCTCCATGTTTGGATGATACC	1	-	67053510-67053559	1qC3	Mus musculus LanC (bacterial lantibiotic synthetase component C)-like 1 (Lancl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISO]	Gpr69; Gpr69a; p40; AW124738	Gpr69; Gpr69a; p40; AW124738
Mus musculus	RefSeq	ILMN_224081	ILMN_232752	SLC9A10	NM_198106.3	NM_198106.3		208169	154350205	NM_198106.3	Slc9a10	NP_932774.2	ILMN_1230999	005270189	S	3539	GGAATGTAAGAAAGTACATCCCACCTCGAAGAATTTCGATGAAACCAGAT				16qB5	Mus musculus solute carrier family 9, member 10 (Slc9a10), mRNA.	A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	spermNHE; Gm610	spermNHE; Gm610
Mus musculus	RefSeq	ILMN_218026	ILMN_218026	SPP1	NM_009263.1	NM_009263.1		20750	6678112	NM_009263.1	Spp1	NP_033289.1	ILMN_2690603	001170139	S	1266	GTTGTTTCATGCAAACACCGTTGTAACCAAAAGCTTCTGCACTTTGCTTC	5	+	104869835-104869884	5qE5	Mus musculus secreted phosphoprotein 1 (Spp1), mRNA.	The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BNSP; minopontin; Eta; AA960535; Spp-1; Opn; Ric; Opnl; BSPI; OP; ETA-1; Apl-1; AI790405; Bsp	BNSP; minopontin; Eta; AA960535; Spp-1; Opn; Ric; Opnl; BSPI; OP; ETA-1; Apl-1; AI790405; Bsp
Mus musculus	Riken	ILMN_205181	ILMN_205181	C230096B03RIK	ri|C230096B03|PX00177K12|AK049059|2350					AK049059	C230096B03Rik		ILMN_2570602	005340300	S	2151	CCTCCCGACTCAGCTACCCAAGCACTGGGAGGACAAGGGTGCTCACCACA										
Mus musculus	RefSeq	ILMN_247301	ILMN_247301	SRRD	NM_027323.1	NM_027323.1		70118	124249055	NM_027323.1	Srrd	NP_081599.1	ILMN_2894057	000010307	S	547	ACTGTCTTCTACATGCCACACTGTGGGACAGCTCTATACAACAACCTGCT	5	-	112767412-112767461	5qF	Mus musculus SRR1 domain containing (Srrd), mRNA. XM_913540 XM_922786 XM_922800 XM_922805 XM_922818		Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]		Srr1	Srr1
Mus musculus	RefSeq	ILMN_214376	ILMN_247301	SRRD	NM_027323.1	NM_027323.1		70118	124249055	NM_027323.1	Srrd	NP_081599.1	ILMN_2647381	000520093	S	677	TGGCGAGGATTCTGCAGGAAAATTACCCCTACATTGCAAAGGTGTCTGAC	5	-	112767012-112767061	5qF	Mus musculus SRR1 domain containing (Srrd), mRNA. XM_913540 XM_922786 XM_922800 XM_922805 XM_922818		Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]		Srr1	Srr1
Mus musculus	RefSeq	ILMN_215928	ILMN_215928	GNGT1	NM_010314.2	NM_010314.2		14699	142366390	NM_010314.2	Gngt1	NP_034444.1	ILMN_2665326	004390291	S	809	CTCAATTTTCTCACAGGCCTACAAAGATTATTGTTTCAATACGCGGATAA	6	+	3947282-3947331	6qA1	Mus musculus guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 (Gngt1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	G(y)1; Gng1	G(y)1; Gng1
Mus musculus	MEEBO	ILMN_216819	ILMN_216819	9030612E09RIK	scl38970.1.5_137	NM_172419.1			27369550	NM_172419.1	9030612E09Rik		ILMN_2675719	003420437	S	1608	GCCCGGACTCCTCCCCATCACTAAGGAATGTGATCCTTATATATGGTTAC										
Mus musculus	RefSeq	ILMN_199541	ILMN_199541	LOC382715	XM_356638.1	XM_356638.1			38074081	XM_356638.1	LOC382715		ILMN_1241777	004250224	S	292	GGTAGGGTACAGTCAAGCCTGGAAACTGATGTCTGGAAGCTGGAGCAGAC										
Mus musculus	Riken	ILMN_205065	ILMN_205065	TBX20	ri|D330001G23|PX00190D17|AK052155|3487					AK052155	Tbx20		ILMN_1224706	001090598	S	3237	ACCCGTGTCCTTAGGCTTCAGCATGGCCCTTTGCATAACTGTCGGTGCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence IMP]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IGI]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_219208	ILMN_219208	4921511H03RIK	NM_027603.1	NM_027603.1		70920	46559371	NM_027603.1	4921511H03Rik	NP_081879.1	ILMN_2911237	006940600	S	741	AGTATTTATGCAAAGCTGAAGAATTCATGGACCCAGCGTCTTTCTTGAGC	5	+	7311471-7311520	5qA1	Mus musculus RIKEN cDNA 4921511H03 gene (4921511H03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_243152	ILMN_243152	GM129	NM_001033302.1	NM_001033302.1		229599	85701803	NM_001033302.1	Gm129	NP_001028474.1	ILMN_3029489	005550176	I	1267	CCCAGGCTCTGCTTCTTTCCCCTGATTCCCAATTTGTATAAATGTATGTT	3	-	95682506-95682555	3qF2.1	Mus musculus gene model 129, (NCBI) (Gm129), mRNA. XM_907670 XM_920513 XM_920520 XM_920527 XM_920533					
Mus musculus	RefSeq	ILMN_243152	ILMN_243152	GM129	NM_001033302.1	NM_001033302.1		229599	85701803	NM_001033302.1	Gm129	NP_001028474.1	ILMN_3102736	001940021	A	1105	GAGGAGCCTCGTTGCCACAGTTTGCCAGTAACACTGCCATCAGACTGGAG	3	-	95682668-95682717	3qF2.1	Mus musculus gene model 129, (NCBI) (Gm129), mRNA. XM_907670 XM_920513 XM_920520 XM_920527 XM_920533					
Mus musculus	RefSeq	ILMN_197767	ILMN_243152	GM129	NM_001033302.1	NM_001033302.1		229599	85701803	NM_001033302.1	Gm129	NP_001028474.1	ILMN_1236079	001500288	S	686	CTTGGTTTCCTCACATAGCTGCCCAGAAGTCATCCTCAGGAGGTAGCCGG	3	-	95684346-95684395	3qF2.1	Mus musculus gene model 129, (NCBI) (Gm129), mRNA. XM_907670 XM_920513 XM_920520 XM_920527 XM_920533					
Mus musculus	RefSeq	ILMN_198455	ILMN_198455	LOC381234	XM_355170.1	XM_355170.1			38085214	XM_355170.1	LOC381234		ILMN_1247483	000630543	S	2	CGTCTCTTCGGTGCAGAGGGGGAAACTCCGCGGGCTCCGAGAAAGAATAA										
Mus musculus	Riken	ILMN_206197	ILMN_206197	ZFP207	ri|C130013B04|PX00167A06|AK081386|2073					AK081386	Zfp207		ILMN_1238321	003520187	S	1891	GTTTCCAGGTCCTCCTCTCTTGTTGAAGGGAGTGGAATTAGGTTGGAGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]				
Mus musculus	RefSeq	ILMN_213464	ILMN_213464	ATF7	NM_146065.1	NM_146065.1		223922	22122556	NM_146065.1	Atf7	NP_666177.1	ILMN_2696100	003780093	S	1128	CGGCAAAAGCGGAAACTGTGGGTGTCCTCCCTGGAAAAGAAGGCAGAAGA	15	-	102371199-102371248	15qF3	Mus musculus activating transcription factor 7 (Atf7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	1110012F10Rik; AI549878; 9430065F09Rik; MGC31554; C130020M04Rik	1110012F10Rik; AI549878; 9430065F09Rik; MGC31554; C130020M04Rik
Mus musculus	RefSeq	ILMN_213464	ILMN_213464	ATF7	NM_146065.1	NM_146065.1		223922	22122556	NM_146065.1	Atf7	NP_666177.1	ILMN_1250975	006290402	S	1128	CCGGCAAAAGCGGAAACTGTGGGTGTCCTCCCTGGAAAAGAAGGCAGAAG	15	-	102371199-102371248	15qF3	Mus musculus activating transcription factor 7 (Atf7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	1110012F10Rik; AI549878; 9430065F09Rik; MGC31554; C130020M04Rik	1110012F10Rik; AI549878; 9430065F09Rik; MGC31554; C130020M04Rik
Mus musculus	RefSeq	ILMN_213464	ILMN_213464	ATF7	NM_146065.1	NM_146065.1		223922	22122556	NM_146065.1	Atf7	NP_666177.1	ILMN_2637254	002120403	S	2787	CCAGAAGGCTGAGACAGGAAGTTCATGAATTCAAGCCCATCCTGAGAGAC	15	-	102367092-102367141	15qF3	Mus musculus activating transcription factor 7 (Atf7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	1110012F10Rik; AI549878; 9430065F09Rik; MGC31554; C130020M04Rik	1110012F10Rik; AI549878; 9430065F09Rik; MGC31554; C130020M04Rik
Mus musculus	Riken	ILMN_203228	ILMN_203228	TRPM7	ri|C030009C17|PX00074I07|AK047673|1445					AK047673	Trpm7		ILMN_1217450	002510241	S	473	AGGAGGACGTCGGATCCCATTGCAAATGGTCGTGAGCCACCGTGTGGTTC						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The binding of a cell to the extracellular matrix via adhesion molecules that require the presence of calcium for the interaction [goid 16340] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212970	ILMN_212970	SIX6OS1	NM_029444.2	NM_029444.2		75801	141802018	NM_029444.2	Six6os1	NP_083720.1	ILMN_1248719	001770433	S	1648	TCAGACTCTTCTCACACATTTGGAGCTGGAAAAGATGACTTTAGTTTTCC	12	-	73982308-73982357	12qC3	Mus musculus Six6 opposite strand transcript 1 (Six6os1), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51090] [evidence NAS]		4930447C04Rik; Six6OS; A930035O15Rik; 4921504I02Rik	4930447C04Rik; Six6OS; A930035O15Rik; 4921504I02Rik
Mus musculus	RefSeq	ILMN_199366	ILMN_199366	MTHFS	NM_026829.2	NM_026829.2		107885	142363048	NM_026829.2	Mthfs	NP_081105.1	ILMN_1223705	005860403	S	331	GGAATATTCATCAGCCTGGTGAGGGAGATGTTCGGGAGGAGGCCTTATCC	9	+	89110255-89110304	9qE3.1	Mus musculus 5, 10-methenyltetrahydrofolate synthetase (Mthfs), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate [goid 30272] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	1110034I12Rik; AI119695; 2310020H23Rik	1110034I12Rik; AI119695; 2310020H23Rik
Mus musculus	RefSeq	ILMN_233935	ILMN_233935	TNNI1	NM_021467.4	NM_021467.4		21952	31981669	NM_021467.4	Tnni1	NP_067442.1	ILMN_2977056	005910670	S	902	GGAGCCAGGATGAAATGGCACACAAAGGGGAAGAGAGATGCCAGTGCCTG	1	+	137707318-137707367	1qE4	Mus musculus troponin I, skeletal, slow 1 (Tnni1), mRNA.		The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AI747285; 2700018B22Rik	AI747285; 2700018B22Rik
Mus musculus	RefSeq	ILMN_226026	ILMN_226026	H2-M2	NM_008204.2	NM_008204.2		14990	118130900	NM_008204.2	H2-M2	NP_032230.1	ILMN_2964185	006560747	S	1180	AAGCCCCAGATAAGTTTTCTCTGCCTCCTTGTTGGGAAGGAGTGTGGCCC	17	-	37622250-37622299	17qB1	Mus musculus histocompatibility 2, M region locus 2 (H2-M2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			H-2M2; Thy19.4	H-2M2; Thy19.4
Mus musculus	RefSeq	ILMN_193239	ILMN_193239	ZDHHC1	NM_175160.3	NM_175160.3		70796	142357306	NM_175160.3	Zdhhc1	NP_780369.1	ILMN_2495299	003120181	S	1806	TTCGCCTGCTGTTTTTGTGAGCCCGAGCAGTGGCGAGCCCGGAACACCTG	8	-	107996523-107996572	8qD3	Mus musculus zinc finger, DHHC domain containing 1 (Zdhhc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IDA]	4432412D04Rik	4432412D04Rik
Mus musculus	RefSeq	ILMN_232969	ILMN_232969	HSN2	NM_001037155.1	NM_001037155.1		406236	81158088	NM_001037155.1	Hsn2	NP_001032232.1	ILMN_3161688	005130468	S	1099	CCTACAGGGGGGACAGCTGCACCTTTTGGCTCTGACGTCTCATTGCCCTT	6	-	119912538-119912587	6qF1	Mus musculus hereditary sensory neuropathy, type II (Hsn2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Hsn2; EG406236	Hsn2; EG406236
Mus musculus	MEEBO	ILMN_184287	ILMN_184287	IGHV10S1_AF064442_IG_HEAVY_VARIABLE_10S1_100	IGHV10S1_AF064442_Ig_heavy_variable_10S1_100						IGHV10S1_AF064442_Ig_heavy_variable_10S1_100		ILMN_2417398	004890424	S	20	ATGTGCCGCCTCTGTTTTCACCTTCAATACCTATGCCATGCACTGGGTCC										
Mus musculus	RefSeq	ILMN_191614	ILMN_191614	ZFP94	NM_009568.2	NM_009568.2		22756	133892753	NM_009568.2	Zfp94	NP_033594.1	ILMN_1231471	000380634	S	2308	GTTCAGCTGCAGACTCTGTTGTGTGTCTCAGTGGGATTTTGACCATCCTC	7	-	25086929-25086978	7qA3	Mus musculus zinc finger protein 94 (Zfp94), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219766	ILMN_310925	6330527O06RIK	NM_029530.2	NM_029530.2		76161	82546884	NM_029530.2	6330527O06Rik	NP_083806.2	ILMN_1252349	007550253	S	1713	GACCCCTGAAAGTGACCCATGCTTCCGGCTGGCATTCTGCATGTCTAGTG	2	+	135895411-135895460	2qF3	Mus musculus RIKEN cDNA 6330527O06 gene (6330527O06Rik), mRNA. XM_925634 XM_925635 XM_925636	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			3110035N03Rik; BAD-LAMP; RP23-7A19.2	3110035N03Rik; BAD-LAMP; RP23-7A19.2
Mus musculus	RefSeq	ILMN_197389	ILMN_242575	ZFP408	NM_001033451.2	NM_001033451.2		381410	142364558	NM_001033451.2	Zfp408	NP_001028623.1	ILMN_1248477	006420544	S	2133	ATGGGCTATGTTCTCCCTCACAGCCTCAAGCGGCACCAGCTCAGTCACCA	2	-	91485402-91485451	2qE1	Mus musculus zinc finger protein 408 (Zfp408), mRNA. XM_915832 XM_923957			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm1011	Gm1011
Mus musculus	MEEBO	ILMN_192827	ILMN_192827	4930486G11RIK	scl35549.1_28						4930486G11Rik		ILMN_2491681	001780288	S	15	GGACCCGGGGCCCGAGAGTACAGAGAGCAGGCAGATGCTACACAAGCCTG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_202080	ILMN_202080	2700017A04RIK	ri|2700017A04|ZX00063E21|AK012253|1241					AK012253	2700017A04Rik		ILMN_2546842	004490040	S	919	GGTCTGAAAGCTAGCGTGTCAACCTACATTGTTACACTGTGAATTGAGCA										
Mus musculus	MEEBO	ILMN_190857	ILMN_190857	NRG4	scl35825.15_671				14030776	NM_032002	Nrg4		ILMN_1231400	005860500	S	3	CTGCAGAGCCCACTTTCTGAGTGTCTCTCAACCCTGTGCGGAAACTGGTA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_252564	ILMN_252564	ESPL1	NM_001014976.1	NM_001014976.1		105988	62510073	NM_001014976.1	Espl1	NP_001014976.1	ILMN_2911855	001050400	S	6189	TGCCGTGCATGGAAACCTGGAGGGAGCTGGTATCGTGCTCAAGTACATCA	15	+	102154178-102154227	15qF3	Mus musculus extra spindle poles-like 1 (S. cerevisiae) (Espl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle [goid 212] [evidence IMP]; Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells [goid 7127] [evidence IMP]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner; this pairing off, referred to as synapsis, permits genetic recombination. One homolog (both sister chromatids) of each morphologic type goes into each of the resulting chromosome sets [goid 45143] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	AL024103; ESP1; PRCE; AU045071; SSE	AL024103; ESP1; PRCE; AU045071; SSE
Mus musculus	RefSeq	ILMN_190922	ILMN_252564	ESPL1	NM_001014976.1	NM_001014976.1		105988	62510073	NM_001014976.1	Espl1	NP_001014976.1	ILMN_1216526	005390241	S	6238	TGATGTACTTGAGCACGATACCAGCTCCCTCCAGGTTTCCATGCACGGCA	15	+	102154227-102154238:102154439-102154476	15qF3	Mus musculus extra spindle poles-like 1 (S. cerevisiae) (Espl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle [goid 212] [evidence IMP]; Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells [goid 7127] [evidence IMP]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner; this pairing off, referred to as synapsis, permits genetic recombination. One homolog (both sister chromatids) of each morphologic type goes into each of the resulting chromosome sets [goid 45143] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	AL024103; ESP1; PRCE; AU045071; SSE	AL024103; ESP1; PRCE; AU045071; SSE
Mus musculus	RefSeq	ILMN_203101	ILMN_321738	4930432E11RIK	XR_035433.1	XR_035433.1		243900	149256494	XR_035433.1	4930432E11Rik		ILMN_1260339	001980215	S	7630	ATCCGGGAGGAGTTGGGACACCCTGGAGAAGAGGACAAGGACAGGGAACT	7	+	30364515-30364564	7qB1	PREDICTED: Mus musculus RIKEN cDNA 4930432E11 gene (4930432E11Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_220858	ILMN_321738	4930432E11RIK	XR_035433.1	XR_035433.1		243900	149256494	XR_035433.1	4930432E11Rik		ILMN_1260349	004480563	S	4428	GGTGCCTAAAAGAGCTATCAAGGGGGAAGTGACAACAGCTGCAGATCAAG	7	+	30360323-30360372	7qB1	PREDICTED: Mus musculus RIKEN cDNA 4930432E11 gene (4930432E11Rik), misc RNA.					
Mus musculus	Riken	ILMN_204175	ILMN_204175	ERCC4	ri|A730088N03|PX00152P17|AK043366|1456					AK043366	Ercc4		ILMN_1235594	006940070	S	1160	GCTCTGCGTCGAGATGCTTGCAATGTGAGGGAAGAGCACACAGTGAAACC						Any complex formed of proteins that act in nucleotide-excision repair [goid 109] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISO]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215994	ILMN_215994	CDH22	NM_174988.2	NM_174988.2		104010	31341388	NM_174988.2	Cdh22	NP_778153.1	ILMN_2666136	004050075	S	3246	GAGAGCTACCTGGAGACCAACTGCATTGTTGGAAAAGCTATGAGGTGGAG	2	-	164937279-164937328	2qH3	Mus musculus cadherin 22 (Cdh22), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200267	ILMN_200267	LOC386107	XM_359072.1	XM_359072.1			38081155	XM_359072.1	LOC386107		ILMN_2538161	005560678	S	725	AGTGCATAGCAACAGGGCTGCCCAACTGGGTCCAGGGTGGCCAACATAGA										
Mus musculus	Riken	ILMN_206923	ILMN_206923	4930556B16RIK	ri|A830087M17|PX00156K02|AK080679|1484					AK080679	4930556B16Rik		ILMN_1251514	003180255	S	997	GAAAGTTCTCTGCTAGGCTTGGGGAAGAAGTCTTTCCAGAGGTCTGACAG										
Mus musculus	RefSeq	ILMN_215252	ILMN_228408	WDR70	XM_978614.1	XM_978614.1		545085	94398398	XM_978614.1	Wdr70	XP_983708.1	ILMN_1246011	002140743	S	472	TTTTGGCTCTAACTCAGATCTCTCTTGTACTAGAGGACGGTCTGGAGTCT	15	-	8040050-8040099	15qA1	PREDICTED: Mus musculus WD repeat domain 70, transcript variant 3 (Wdr70), mRNA.					
Mus musculus	MEEBO	ILMN_188282	ILMN_188282	SCN3B	scl00235281.1_114				23943798	NM_153522	Scn3b		ILMN_2451346	006480309	S	16	GCTGAGAAAGATAGCAGTGGGCTTAAAAGTGGAAAGGGCTAAGGTGATAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212043	ILMN_212043	IARS	NM_172015.2	NM_172015.2		105148	141802528	NM_172015.2	Iars	NP_742012.1	ILMN_1227208	006510088	S	4180	CTGGAGTTCTTCAGTATAGAAAGTGGAAGTGGTTTAAATGGCATAGTACA	13	+	49829434-49829483	13qA5	Mus musculus isoleucine-tRNA synthetase (Iars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence ISO]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence ISO]	2510016L12Rik; E430001P04Rik; ILRS; AI327140; AU044614	2510016L12Rik; E430001P04Rik; ILRS; AI327140; AU044614
Mus musculus	RefSeq	ILMN_212043	ILMN_212043	IARS	NM_172015.2	NM_172015.2		105148	141802528	NM_172015.2	Iars	NP_742012.1	ILMN_1224044	002970403	S	1515	CAGTGGCAGAGCTTGAAGAACTGTCGGGAACAAAAATCTCAGATCTCCAC	13	+	49803791-49803840	13qA5	Mus musculus isoleucine-tRNA synthetase (Iars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence ISO]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence ISO]	2510016L12Rik; E430001P04Rik; ILRS; AI327140; AU044614	2510016L12Rik; E430001P04Rik; ILRS; AI327140; AU044614
Mus musculus	RefSeq	ILMN_238095	ILMN_238095	DNASE2A	NM_010062.3	NM_010062.3		13423	87299638	NM_010062.3	Dnase2a	NP_034192.1	ILMN_2975892	005080333	S	1198	GTATAGAGGGGAGCTGACTGAAGCCCATCGGAGCAAAGGACTAAGACTCC	8	+	87434915-87434931:87434932-87434964	8qC3	Mus musculus deoxyribonuclease II alpha (Dnase2a), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IMP]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products [goid 4531] [evidence IDA]	Dnase2	Dnase2
Mus musculus	RefSeq	ILMN_223651	ILMN_223651	PCDHGA9	NM_033592.3	NM_033592.3		93717	118130792	NM_033592.3	Pcdhga9	NP_291070.1	ILMN_2767156	004060561	S	2549	GAACCTCTGTGCAGTTCAGTTGAGCCCAAGTTTCCTATTGATGACACTCC	18	+	37899138-37899187	18qB3	Mus musculus protocadherin gamma subfamily A, 9 (Pcdhga9), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186025	ILMN_186025	MKL1	scl46940.15_253				23346454	NM_153049	Mkl1		ILMN_2630120	004560446	S	2682	GACACCTCTGAATTGCACTTTGCTCCTGAGCCCAGCAGTGGTATGGGCCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_254616	ILMN_254616	KLK5	NM_026806.1	NM_026806.1		68668	113866014	NM_026806.1	Klk5	NP_081082.1	ILMN_2970715	005820053	S	921	CTCCAACTAATGAGCCACACCAGGAACCACGGAACCAGTGCCACCCAACG				7qB4	Mus musculus kallikrein related-peptidase 5 (Klk5), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	1110030O19Rik	1110030O19Rik
Mus musculus	MEEBO	ILMN_191938	ILMN_191938	1810005K13RIK	scl0066255.1_40						1810005K13Rik		ILMN_1246137	001710594	S	20	GGACGCCGGAAGTTCCCTGTGGGGACTTGCTGCAGAACGGCTGAGAATCT										
Mus musculus	Riken	ILMN_203929	ILMN_203929	A130039H17RIK	ri|A130039H17|PX00123B05|AK037709|3967					AK037709	A130039H17Rik		ILMN_2561062	000610685	S	3361	CGGGAGTCTCGAGTTCCACTGCCCCGTGTTCAGATGGCTTCATGGAAGGT										
Mus musculus	RefSeq	ILMN_219088	ILMN_219088	LRP5	NM_008513.1	NM_008513.1		16973	6678715	NM_008513.1	Lrp5	NP_032539.1	ILMN_2729431	003310327	S	3635	TGATCGAGCGCGTGGAGAAGACCACTGGGGACAAGCGGACTAGGGTTCAG	19	-	3602296-3602345	19qA	Mus musculus low density lipoprotein receptor-related protein 5 (Lrp5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	LR3; BMND1; HBM; mKIAA4142; KIAA4142; LRP7; OPPG	LR3; BMND1; HBM; mKIAA4142; KIAA4142; LRP7; OPPG
Mus musculus	RefSeq	ILMN_219088	ILMN_219088	LRP5	NM_008513.1	NM_008513.1		16973	6678715	NM_008513.1	Lrp5	NP_032539.1	ILMN_2729433	000540630	S	3637	ATCGAGCGCGTGGAGAAGACCACTGGGGACAAGCGGACTAGGGTTCAGGG	19	-	3602294-3602343	19qA	Mus musculus low density lipoprotein receptor-related protein 5 (Lrp5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	LR3; BMND1; HBM; mKIAA4142; KIAA4142; LRP7; OPPG	LR3; BMND1; HBM; mKIAA4142; KIAA4142; LRP7; OPPG
Mus musculus	RefSeq	ILMN_219088	ILMN_219088	LRP5	NM_008513.1	NM_008513.1		16973	6678715	NM_008513.1	Lrp5	NP_032539.1	ILMN_2942097	006510091	S	5070	TGAGAAATGTGAGCGGTGAAGGGGTGGGCAGGGCTGGGAAACTTTTCTAG				19qA	Mus musculus low density lipoprotein receptor-related protein 5 (Lrp5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	LR3; BMND1; HBM; mKIAA4142; KIAA4142; LRP7; OPPG	LR3; BMND1; HBM; mKIAA4142; KIAA4142; LRP7; OPPG
Mus musculus	RefSeq	ILMN_235652	ILMN_235652	YEATS2	NM_001033237.1	NM_001033237.1		208146	84794612	NM_001033237.1	Yeats2	NP_001028409.1	ILMN_2942588	004260653	S	5432	CAGGTACCAAGGGATCTACCGTGCAGGGACTGGGCAAGCACAGCTTACTG	16	+	20232126-20232175	16qA3	Mus musculus YEATS domain containing 2 (Yeats2), mRNA. XM_900167 XM_911624 XM_914159 XM_923096 XM_923099	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		BC042768; mKIAA1197	BC042768; mKIAA1197
Mus musculus	RefSeq	ILMN_207527	ILMN_235652	YEATS2	NM_001033237.1	NM_001033237.1		208146	84794612	NM_001033237.1	Yeats2	NP_001028409.1	ILMN_2587984	003190139	I	4469	GGACACGGCTTCGTCAGTTTGCATTTCTTTACTCCCACAAGGCTCTGCGG	16	+	20231163-20231212	16qA3	Mus musculus YEATS domain containing 2 (Yeats2), mRNA. XM_900167 XM_911624 XM_914159 XM_923096 XM_923099	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		BC042768; mKIAA1197	BC042768; mKIAA1197
Mus musculus	RefSeq	ILMN_192631	ILMN_235652	YEATS2	NM_001033237.1	NM_001033237.1		208146	84794612	NM_001033237.1	Yeats2	NP_001028409.1	ILMN_2489877	002350717	S	5443	GGATCTACCGTGCAGGGACTGGGCAAGCACAGCTTACTGCTATAATTGGG	16	+	20232137-20232186	16qA3	Mus musculus YEATS domain containing 2 (Yeats2), mRNA. XM_900167 XM_911624 XM_914159 XM_923096 XM_923099	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		BC042768; mKIAA1197	BC042768; mKIAA1197
Mus musculus	RefSeq	ILMN_192631	ILMN_235652	YEATS2	NM_001033237.1	NM_001033237.1		208146	84794612	NM_001033237.1	Yeats2	NP_001028409.1	ILMN_1260491	001690224	I	3105	CCAGTCCCCAGCAGGCTGTCCTGACAATTCCCAGTCAACTCAAGCCACTA	16	+	20213367-20213416	16qA3	Mus musculus YEATS domain containing 2 (Yeats2), mRNA. XM_900167 XM_911624 XM_914159 XM_923096 XM_923099	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		BC042768; mKIAA1197	BC042768; mKIAA1197
Mus musculus	RefSeq	ILMN_211056	ILMN_211056	D14ERTD500E	NM_145462.1	NM_145462.1		219072	21703915	NM_145462.1	D14Ertd500e	NP_663437.1	ILMN_2612044	000830528	S	830	AAGAGCCAGCAGAAGGAGCAGCTGGTACTCCTGGAGAAGAAGAGGACCAC	14	-	55163051-55163100	14qC3	Mus musculus DNA segment, Chr 14, ERATO Doi 500, expressed (D14Ertd500e), mRNA.				AU016300; 9430093H08Rik	AU016300; 9430093H08Rik
Mus musculus	RefSeq	ILMN_244144	ILMN_244144	GM889	NM_001033437.1	NM_001033437.1		380755	85701952	NM_001033437.1	Gm889	NP_001028609.1	ILMN_2924715	001050554	S	879	CCGAACTGTCTCTGTGTTGAGGGGAACCGGGTGCTCATGCTTTTCAGTAG	12	-	40687093-40687142	12qB1	Mus musculus gene model 889, (NCBI) (Gm889), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_220849	ILMN_220849	PTPN4	NM_019933.2	NM_019933.2		19258	117320547	NM_019933.2	Ptpn4	NP_064317.2	ILMN_2727712	005910553	S	2898	TATGTGAAGCTATTCTGAAAGTTTATGAAGAAGGATTTGTTAAACCATTA	1	-	121556428-121556477	1qE2.3	Mus musculus protein tyrosine phosphatase, non-receptor type 4 (Ptpn4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4726] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TEP; PTPMEG; hPTP-MEG; TEP/mPTPMEG; Ptn4	TEP; PTPMEG; hPTP-MEG; TEP/mPTPMEG; Ptn4
Mus musculus	RefSeq	ILMN_198418	ILMN_198418	LOC226086	XM_140592.2	XM_140592.2			38084929	XM_140592.2	LOC226086		ILMN_1227809	002630328	S	1221	CTCTCTCCTAACACTGTCCGATGACCCAGGATGTGACCGGGATGGGCGCT										
Mus musculus	RefSeq	ILMN_195969	ILMN_195969	TRIT1	NM_025873.1	NM_025873.1		66966	21313211	NM_025873.1	Trit1	NP_080149.2	ILMN_2920309	003170102	S	1893	CTGTGAATCTACAGAAGAGGGGGTCAGGCTGAGGTGGTTGTGACCTGGAT	4	+	122557071-122557120	4qD2.2	Mus musculus tRNA isopentenyltransferase 1 (Trit1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: isopentenyl diphosphate + tRNA = diphosphate + tRNA containing 6-isopentenyladenosine [goid 4811] [evidence IEA]	AI314635; 2310075G14Rik; AI314189; AV099619; IPT; MOD5	AI314635; 2310075G14Rik; AI314189; AV099619; IPT; MOD5
Mus musculus	RefSeq	ILMN_206788	ILMN_248711	9330129D05RIK	XM_001000566.1	XM_001000566.1		338350	94376692	XM_001000566.1	9330129D05Rik	XP_001000566.1	ILMN_1245347	004280521	S	1977	TTGCTGCAAGCTGGGCACCCTGAGTTCTATCCTCAGGACCTACATGGTAG				5qF	PREDICTED: Mus musculus RIKEN cDNA 9330129D05 gene, transcript variant 1 (9330129D05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_244718	ILMN_244718	EG384813	NM_001025240.1	NM_001025240.1		384813	68989259	NM_001025240.1	EG384813	NP_001020411.1	ILMN_3133209	006900747	A	1948	CACCACTGCCATTGTACTAACACATGGGAACCACCGGACTGTCAACTACA	8	-	44710542-44710591	8qA4	Mus musculus predicted gene, EG384813 (EG384813), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_244718	ILMN_244718	EG384813	NM_001025240.1	NM_001025240.1		384813	68989259	NM_001025240.1	EG384813	NP_001020411.1	ILMN_3056397	002810687	I	2116	GGCATTCGTGAATTAAGGAAAAAACTCCTAAAAGAATCGGTGCCAGAATC	8	-	44710374-44710423	8qA4	Mus musculus predicted gene, EG384813 (EG384813), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223722	ILMN_223722	2900083I11RIK	NM_021403.1	NM_021403.1		58212	10946753	NM_021403.1	2900083I11Rik	NP_067378.1	ILMN_1225986	004760377	S	1682	TTTTTTTAAACATTTATTTACTTATTGTATGTGCACGTGTGTGACCGTGA	5	+	136126267-136126316	5qG2	Mus musculus RIKEN cDNA 2900083I11 gene (2900083I11Rik), mRNA.				AB041661	AB041661
Mus musculus	RefSeq	ILMN_215579	ILMN_215579	RARA	NM_009024.2	NM_009024.2		19401	116734872	NM_009024.2	Rara	NP_033050.2	ILMN_2661242	002940561	S	1654	GGAGGCCCAGCCGACCCCACATGTTCCCCAAGATGCTGATGAAGATCACA	11	+	98833910-98833959	11qD	Mus musculus retinoic acid receptor, alpha (Rara), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IDA]	Nr1b1; RAR; RARalpha1	Nr1b1; RAR; RARalpha1
Mus musculus	RefSeq	ILMN_197609	ILMN_256593	LOC630421	XM_903568.3	XM_903568.3		630421	149266202	XM_903568.3	LOC630421	XP_908661.3	ILMN_1221849	007610296	S	149	CTGCCTCATCATACTTCCCTTGGTACAAGCAAGAAGCTGGAAAGAGTCTC	14	+	53430523-53430572		PREDICTED: Mus musculus similar to T cell receptor alpha chain (LOC630421), mRNA.					
Mus musculus	Riken	ILMN_203189	ILMN_203189	ESRRB	ri|A930008D01|PX00065O08|AK044339|2364					AK044339	Esrrb		ILMN_2555396	001940709	S	1875	CAAGGGTAGCCTGGAGTTCAAAGGACAGTAGTCATGGAGGCCAGCACTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The morphogenesis of trophectoderm cells [goid 1831] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The proliferation of cells in the trophectoderm [goid 1834] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218872	ILMN_218872	ES1	NM_007954.1	NM_007954.1		13884	6679688	NM_007954.1	Es1	NP_031980.1	ILMN_2704749	006040397	S	640	TTGGAGGGAACCCGGATTCCGTGACCATCTTTGGAGAGTCATCAGGGGGT	8	-	96012241-96012290	8qC5	Mus musculus esterase 1 (Es1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IDA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Es-4; Es-1; Ee-1; Es-N	Es-4; Es-1; Ee-1; Es-N
Mus musculus	RefSeq	ILMN_218872	ILMN_218872	ES1	NM_007954.1	NM_007954.1		13884	6679688	NM_007954.1	Es1	NP_031980.1	ILMN_2980371	003170605	S	1368	GGTTGAGGGTGATCATGGCGATGAAATCTTCTTTGTATTCGGGGCTCCAC	8	-	95993250-95993299	8qC5	Mus musculus esterase 1 (Es1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IDA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Es-4; Es-1; Ee-1; Es-N	Es-4; Es-1; Ee-1; Es-N
Mus musculus	RefSeq	ILMN_211758	ILMN_211758	TMEM74	NM_175502.3	NM_175502.3		239408	142363828	NM_175502.3	Tmem74	NP_780711.1	ILMN_1259376	002690167	S	1386	GACACTCTGGAACTGTCCTTGGTAGAGGAAGATGCCCTTGCTGTACAGAG	15	-	43698277-43698326	15qB3.2	Mus musculus transmembrane protein 74 (Tmem74), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA549547; B230382K22Rik	AA549547; B230382K22Rik
Mus musculus	RefSeq	ILMN_211758	ILMN_211758	TMEM74	NM_175502.3	NM_175502.3		239408	142363828	NM_175502.3	Tmem74	NP_780711.1	ILMN_2739998	001450392	S	41	GAAATAACGGACTTTCTCCGGGTGCCATGCGGACGCGAGTGTTCACAGCT	15	-	43701485-43701534	15qB3.2	Mus musculus transmembrane protein 74 (Tmem74), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA549547; B230382K22Rik	AA549547; B230382K22Rik
Mus musculus	RefSeq	ILMN_211758	ILMN_211758	TMEM74	NM_175502.3	NM_175502.3		239408	142363828	NM_175502.3	Tmem74	NP_780711.1	ILMN_1246324	006130136	S	1137	CCCAATACAGTGGCAGCCCGGGAAATGGAACGCCTAGAAAAGGAGAGTGC	15	-	43698526-43698575	15qB3.2	Mus musculus transmembrane protein 74 (Tmem74), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA549547; B230382K22Rik	AA549547; B230382K22Rik
Mus musculus	RefSeq	ILMN_219769	ILMN_236806	CTHRC1	NM_026778.2	NM_026778.2		68588	142353090	NM_026778.2	Cthrc1	NP_081054.1	ILMN_2713401	002490189	S	1051	TTGGAATGCCATTACAGTATTTAGTATTTCCTTCTATAACATATAAATGT	15	+	38918552-38918601	15qB3.1	Mus musculus collagen triple helix repeat containing 1 (Cthrc1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110014B07Rik	1110014B07Rik
Mus musculus	RefSeq	ILMN_197684	ILMN_236806	CTHRC1	NM_026778.2	NM_026778.2		68588	142353090	NM_026778.2	Cthrc1	NP_081054.1	ILMN_1225073	000020343	S	236	GAATGTGTCTACAAGGACCAGCAGGAGTTCCCGGTCGTGATGGGAGCCCT	15	+	38912036-38912085	15qB3.1	Mus musculus collagen triple helix repeat containing 1 (Cthrc1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110014B07Rik	1110014B07Rik
Mus musculus	RefSeq	ILMN_223348	ILMN_326428	SH2D4A	XM_001476415.1	XM_001476415.1		72281	149258825	XM_001476415.1	Sh2d4a	XP_001476465.1	ILMN_1244901	002940520	S	2373	GACCCAAGTGTAAATTGAAAGACAAGTTTCAAAACTTGAGATGAGAGACT				8qB3.3	PREDICTED: Mus musculus SH2 domain containing 4A (Sh2d4a), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184438	ILMN_247516	3200002M19RIK	NM_027532.3	NM_027532.3		75430	146141158	NM_027532.3	3200002M19Rik	NP_081808.2	ILMN_2711401	004810400	S	28	CTTGGCGCGATGAGGAAACTGAGGCCCAGAGAGGTTAAGTGTATTGGCCA				7qE3	Mus musculus RIKEN cDNA 3200002M19 gene (3200002M19Rik), mRNA.				6330414C15Rik	6330414C15Rik
Mus musculus	RefSeq	ILMN_188738	ILMN_253758	BTBD2	XM_910826.2	XM_910826.2		208198	94388399	XM_910826.2	Btbd2	XP_915919.2	ILMN_2722033	000460008	S	616	CAATGGTGGGATGGCTACCACGTCCACCGAGATTGAGCTGCCTGATGTGG				10qC1	PREDICTED: Mus musculus BTB (POZ) domain containing 2, transcript variant 3 (Btbd2), mRNA.					
Mus musculus	Riken	ILMN_202594	ILMN_202594	D330022O09RIK	ri|D330022O09|PX00093P17|AK021286|1503					AK021286	D330022O09Rik		ILMN_2550794	007100609	S	1410	GTTCGAGTGTGCTCACCTAATGAAAGGTTATTCTGGCCCTTCAGCAAACG										
Mus musculus	RefSeq	ILMN_224382	ILMN_224382	D5ERTD135E	NM_172490.1	NM_172490.1		211006	27369675	NM_172490.1	D5Ertd135e	NP_766078.1	ILMN_2950270	005220450	S	1316	CAATGCGGCAGCAGCCATCGGGATGAAGATGCAGGATGTGGACCTGTTCA	5	-	52932214-52932263	5qC1	Mus musculus DNA segment, Chr 5, ERATO Doi 135, expressed (D5Ertd135e), mRNA.				AA986712; SLA; 9130208G10	AA986712; SLA; 9130208G10
Mus musculus	RefSeq	ILMN_214644	ILMN_214644	1810055G02RIK	NM_028077.2	NM_028077.2		72056	141803062	NM_028077.2	1810055G02Rik	NP_082353.1	ILMN_2650275	000150066	S	1657	CTTCCAGATCCTTTCGGTGCAATTTCAGAGCTGTGCCAGATGCTAGACAC	19	+	3717656-3717705	19qA	Mus musculus RIKEN cDNA 1810055G02 gene (1810055G02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI256204	AI256204
Mus musculus	MEEBO	ILMN_184274	ILMN_184274	9430021M05RIK	scl19975.3_27						9430021M05Rik		ILMN_2417290	004070059	S	6	CTACAAATGTGGATCCCAGAAGATTTCAGGTACTGATAGAGCTCATTGCA										
Mus musculus	RefSeq	ILMN_222085	ILMN_222085	OSTF1	NM_017375.2	NM_017375.2		20409	142362503	NM_017375.2	Ostf1	NP_059071.1	ILMN_2744398	003360653	S	584	TCTGCACGCGGCTGCCTGGAAGGGTTATGCAGACATTGTCCAGTTGCTAC	19	-	18661046-18661095	19qB	Mus musculus osteoclast stimulating factor 1 (Ostf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	C78236; SH3P2; Sh3d3	C78236; SH3P2; Sh3d3
Mus musculus	MEEBO	ILMN_223662	ILMN_223662	5730405G21RIK	scl48643.2_113	NM_177199.2			31343046	NM_177199.2	5730405G21Rik		ILMN_2767312	007050754	S	1209	CTAGTGTGCTACTCCAACTGAGGAAAAAAACCACACAGTTCCTGTCTATG										
Mus musculus	RefSeq	ILMN_215873	ILMN_215873	ATRX	NM_009530.1	NM_009530.1		22589	6678608	NM_009530.1	Atrx	NP_033556.1	ILMN_2929300	002570437	S	7174	TGTAGAAGCCACGAACAGTATGACGGCAGTGAGGATTCAGCCTCTTGAAG	X	-	102997339-102997388	XqD	Mus musculus alpha thalassemia/mental retardation syndrome X-linked homolog (human) (Atrx), mRNA.	A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IDA]	The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DXHXS6677E; ZNF-HX; XH2; ATR2; MRXS3; RAD54L; Hp1bp2; Hp1bp38; Rad54; Xnp	DXHXS6677E; ZNF-HX; XH2; ATR2; MRXS3; RAD54L; Hp1bp2; Hp1bp38; Rad54; Xnp
Mus musculus	RefSeq	ILMN_197521	ILMN_197521	LOC380923	XM_358466.1	XM_358466.1			38076411	XM_358466.1	LOC380923		ILMN_2528424	006760709	S	445	GCACCTTACAGACTGTTATAACTCTCATCCCAACACGGCATCGGGCAGAG										
Mus musculus	RefSeq	ILMN_260857	ILMN_260857	EAR5	NM_019398.1	NM_019398.1		54159	9506558	NM_019398.1	Ear5	NP_062271.1	ILMN_2861276	003290400	S	226	GTCCGTGTGTGTCACAATCCACCCAAGACTTGCAAAGACGGGACAAGTCC	14	+	51782364-51782413	14qC1	Mus musculus eosinophil-associated, ribonuclease A family, member 5 (Ear5), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	mR5; MGC143624	mR5; MGC143624
Mus musculus	RefSeq	ILMN_211021	ILMN_229788	LOC669168	XM_973545.1	XM_973545.1		669168	94408581	XM_973545.1	LOC669168	XP_978639.1	ILMN_2770180	006420349	S	3469	CTAGGAAGGAGCTGAGATCACAAGGATGACATTGAAGGAGACAACGGGGC					PREDICTED: Mus musculus similar to Histone deacetylase 6 (HD6) (Histone deacetylase mHDA2) (LOC669168), mRNA.					
Mus musculus	RefSeq	ILMN_214080	ILMN_214080	PAPD5	XM_134422.9	XM_134422.9		214627	149258973	XM_134422.9	Papd5	XP_134422.8	ILMN_2644047	006900202	S	3857	AATGCTATAAAGTAAGACCAAAACCGGTGTCATCACTGAAATTAACAATT	8	+	90782856-90782905	8qC3	PREDICTED: Mus musculus PAP associated domain containing 5, transcript variant 1 (Papd5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209991	ILMN_209991	ABCD1	NM_007435.1	NM_007435.1		11666	6671496	NM_007435.1	Abcd1	NP_031461.1	ILMN_1245447	006220438	S	3313	TTGTCTAAATTGCCAACATGAGTACCCTGCCAGCACAGGAGGTGACTGGG	X	+	70974608-70974611:70974548-70974593	XqA7.3	Mus musculus ATP-binding cassette, sub-family D (ALD), member 1 (Abcd1), mRNA. XM_973409	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ald; ALDP; Aldgh	Ald; ALDP; Aldgh
Mus musculus	RefSeq	ILMN_202420	ILMN_247941	LOC667034	XM_992876.1	XM_992876.1		667034	94397054	XM_992876.1	LOC667034	XP_997970.1	ILMN_2549473	006760341	S	1282	GGCTGTGCTGATGACATCAAGAAACTTGGTGTGACTCGGGAGGGGTTTCC	14	+	51584332-51584381	14qC1	PREDICTED: Mus musculus similar to purine nucleoside phosphorylase, transcript variant 1 (LOC667034), mRNA.					
Mus musculus	RefSeq	ILMN_214375	ILMN_237418	4930564C03RIK	XM_001003502.1	XM_001003502.1		75341	94402941	XM_001003502.1	4930564C03Rik	XP_001003502.1	ILMN_1214233	001260050	S	1039	GGGAAAACAGCTGTAAAGCCCAATCAAAAGAAATGCTTGGCCCTGCCACC				17qB3	PREDICTED: Mus musculus RIKEN cDNA 4930564C03 gene (4930564C03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_246562	ILMN_246562	FBXW2	NM_013890.2	NM_013890.2		30050	31980722	NM_013890.2	Fbxw2	NP_038918.2	ILMN_2860271	006980747	S	1644	ATCTGTTTGCCAGGGCTGGGGCGGGGAGGGCTTGTTTACTGACATACACC	2	-	34627537-34627586	2qB	Mus musculus F-box and WD-40 domain protein 2 (Fbxw2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]		FBW2; 2700071L08Rik; MD6; Fwd2	FBW2; 2700071L08Rik; MD6; Fwd2
Mus musculus	RefSeq	ILMN_219653	ILMN_219653	TSPAN33	NM_146173.2	NM_146173.2		232670	118130219	NM_146173.2	Tspan33	NP_666285.1	ILMN_1219904	002190102	S	1626	AGGTAGTCAGAGTGAGCTATATCCTGCTCCTCCCTCGTCTCCATGGAAAC	6	+	29668225-29668274	6qA3.3	Mus musculus tetraspanin 33 (Tspan33), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1300010A20Rik; MGC30714; AI035228	1300010A20Rik; MGC30714; AI035228
Mus musculus	RefSeq	ILMN_210218	ILMN_228858	2610301G19RIK	XM_001001452.2	XM_001001452.2		219158	149265787	XM_001001452.2	2610301G19Rik	XP_001001452.1	ILMN_1256489	005420020	S	127	GGCGGCTGCGGTGGTTCCGGGTGTCTTTGTCCCCCTGGTGTCGTGGCCCT	14	-	70553442-70553491	14qD2	PREDICTED: Mus musculus RIKEN cDNA 2610301G19 gene (2610301G19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_257787	ILMN_257787	HECA	NM_001033432.3	NM_001033432.3		380629	146198744	NM_001033432.3	Heca	NP_001028604.1	ILMN_3163486	007380047	A	2769	GCCTGCTGTGCTGCAGAACCACCTGTGCCACACTTCCTTTTCAGTATATC				10qA2-qA3	Mus musculus headcase homolog (Drosophila) (Heca), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HDC; HDCL; Gm869	HDC; HDCL; Gm869
Mus musculus	MEEBO	ILMN_184955	ILMN_184955	IGHV1S124_AF025449_IG_HEAVY_VARIABLE_1S124_11	IGHV1S124_AF025449_Ig_heavy_variable_1S124_11						IGHV1S124_AF025449_Ig_heavy_variable_1S124_11		ILMN_2422974	000020397	S	20	GTAGCAACAGCTACAGGTGTCCACTCCCAGGCCCAAATACAGCAGCCTGG										
Mus musculus	MEEBO	ILMN_223887	ILMN_223887	PRKCE	scl018754.15_10				6755083	NM_011104	Prkce		ILMN_2771063	005080315	S	2149	GAAGCAATCATTAAGCAGATCAACCAGGAAGAATTCAAAGGCTTCTCCTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IMP]; Behavior that is dependent upon the sensation of chemicals [goid 7635] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol but not calcium [goid 4699] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210996	ILMN_210996	H2-M11	NM_177635.1	NM_177635.1		224754	29244031	NM_177635.1	H2-M11	NP_808303.1	ILMN_2611410	003930170	S	713	CCTAACCTGGGAAAGGGACAAAAGCAATCAAACCCTGGACATGGAGGTCA	17	+	36685774-36685823	17qB1	Mus musculus histocompatibility 2, M region locus 11 (H2-M11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_233804	ILMN_233804	BC025920	NM_001033363.1	NM_001033363.1		268319	85701857	NM_001033363.1	BC025920	NP_001028535.1	ILMN_2918278	004890463	S	1530	CCCATGAAGTGTGACCTTGTTGTAGGGTTTTGGACAAGCATAGCCCAGGG	10	+	81012605-81012654	10qC1	Mus musculus cDNA sequence BC025920 (BC025920), mRNA.					
Mus musculus	RefSeq	ILMN_223354	ILMN_223354	SIGLEC1	NM_011426.2	NM_011426.2		20612	117938285	NM_011426.2	Siglec1	NP_035556.2	ILMN_2762966	004570458	S	6120	GCATGACAGGGTCTTAGTTTTCCCTCCTGGCCTGGTTATGTTGTTGTGGT	2	-	130895173-130895222	2qF1	Mus musculus sialic acid binding Ig-like lectin 1, sialoadhesin (Siglec1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CD169; Siglec-1; Sn	CD169; Siglec-1; Sn
Mus musculus	RefSeq	ILMN_210211	ILMN_210211	CAV3	NM_007617.2	NM_007617.2		12391	31982475	NM_007617.2	Cav3	NP_031643.1	ILMN_2603299	007650332	S	928	GAAGGAAAAGACAGCCCAGTGTGGAAACACGGGCACCCCTGCTCCGCTCA	6	+	112422633-112422682	6qE3	Mus musculus caveolin 3 (Cav3), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence ISO]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of membrane rafts, small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes [goid 31579] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel [goid 51925] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; Any process that stops or reduces the activity of the enzyme nitric-oxide synthase [goid 51001] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence TAS]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the plasma membrane [goid 7009] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cav-3; M-caveolin; AI385751; caveolin-3; M-cav	Cav-3; M-caveolin; AI385751; caveolin-3; M-cav
Mus musculus	RefSeq	ILMN_221169	ILMN_221169	CREG2	NM_170597.4	NM_170597.4		263764	76096370	NM_170597.4	Creg2	NP_733485.1	ILMN_2731854	006330307	S	2822	CCACCTCACTGGTACCTTTTGCTATGTTAGCTTGTTATGAGTTAGCTCCT	1	-	39678178-39678227	1qB	Mus musculus cellular repressor of E1A-stimulated genes 2 (Creg2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]			A830098L22Rik	A830098L22Rik
Mus musculus	RefSeq	ILMN_196075	ILMN_236940	TIPIN	NM_025372.3	NM_025372.3		66131	146134905	NM_025372.3	Tipin	NP_079648.1	ILMN_1234909	006450047	S	820	CGCCAGTACACATGAAGAGGAACAGTGCAAAGCAGAGGAGACACAACTGG				9qC	Mus musculus timeless interacting protein (Tipin), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that prevents the collapse of stalled replication forks [goid 48478] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110018P21Rik; 1110005A05Rik	1110018P21Rik; 1110005A05Rik
Mus musculus	RefSeq	ILMN_196075	ILMN_236940	TIPIN	NM_025372.3	NM_025372.3		66131	146134905	NM_025372.3	Tipin	NP_079648.1	ILMN_1216801	002140370	S	194	GGAGTACCTGTTCCGCCAAAGAGAACAGTTAAAAGGAATCTACCTAAGCT				9qC	Mus musculus timeless interacting protein (Tipin), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that prevents the collapse of stalled replication forks [goid 48478] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110018P21Rik; 1110005A05Rik	1110018P21Rik; 1110005A05Rik
Mus musculus	RefSeq	ILMN_195440	ILMN_247010	TAF1	NM_001081008.1	NM_001081008.1		270627	124486595	NM_001081008.1	Taf1	NP_001074477.1	ILMN_1251576	000520296	S	7329	AAGCTAAGGAGGTGGAATCTAAAGTTCAATGGTGCCATTGGAATGAAGGG	X	+	98796397-98796446	XqD	Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Ccg1; Taf2a; TAFII250; 250kDa; AU015687; Ccg-1; B430306D02Rik	Ccg1; Taf2a; TAFII250; 250kDa; AU015687; Ccg-1; B430306D02Rik
Mus musculus	RefSeq	ILMN_195440	ILMN_247010	TAF1	NM_001081008.1	NM_001081008.1		270627	124486595	NM_001081008.1	Taf1	NP_001074477.1	ILMN_1223188	005340678	S	6761	CAGAAAAAGGATGCTGGAGTGACTAGACATGACACTGAAAGACGGACAGG	X	+	98795829-98795878	XqD	Mus musculus TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Ccg1; Taf2a; TAFII250; 250kDa; AU015687; Ccg-1; B430306D02Rik	Ccg1; Taf2a; TAFII250; 250kDa; AU015687; Ccg-1; B430306D02Rik
Mus musculus	RefSeq	ILMN_203636	ILMN_320513	LOC100044727	XM_001472813.1	XM_001472813.1		100044727	149268384	XM_001472813.1	LOC100044727	XP_001472863.1	ILMN_1246692	002320561	S	292	TAAAGGTCCACAGCAGAGAGCAAAGAGGTGCAGACCGAGGGGGCGAGAGA					PREDICTED: Mus musculus hypothetical protein LOC100044727 (LOC100044727), mRNA.					
Mus musculus	RefSeq	ILMN_223709	ILMN_223709	DUSP22	NM_134068.1	NM_134068.1		105352	19527287	NM_134068.1	Dusp22	NP_598829.1	ILMN_2767996	006060494	S	632	AAGAAAAGTGATGTAAAGTTTATTTTTAAGAATCCAATAGTGATTTGTAT	13	+	30718264-30718313	13qA3.2	Mus musculus dual specificity phosphatase 22 (Dusp22), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence ISO]	AW212235; MKPX; JSP1; JKAP; MGC118031; 1110028K04Rik; RP23-217J3.1	AW212235; MKPX; JSP1; JKAP; MGC118031; 1110028K04Rik; RP23-217J3.1
Mus musculus	Riken	ILMN_205566	ILMN_205566	A930030D01RIK	ri|A930030D01|PX00067M17|AK044659|2620					AK044659	A930030D01Rik		ILMN_1215298	000520612	S	2325	GGATGCGGTAAGGGTCCACCATCCTTTTGCTTTTGACTATCAGGTGACCC										
Mus musculus	Riken	ILMN_203317	ILMN_203317	MASS1	ri|E130110J24|PX00091M10|AK053565|1594					AK053565	Mass1		ILMN_1240684	002630465	S	1412	TGGTGTTGACACAATGCTGAGCTGGTAGAATATATGCCTTTTCCACTATG										
Mus musculus	RefSeq	ILMN_196772	ILMN_196772	H2-Q1	NM_010390.2	NM_010390.2		15006	47551350	NM_010390.2	H2-Q1	NP_034520.1	ILMN_1216688	001740477	S	996	TGTGATGAAGAGGAGGAGAAACAAAGGTGGACAAGGAGAGGACTGTGCTC	17	+	35459135-35459184	17qB1	Mus musculus histocompatibility 2, Q region locus 1 (H2-Q1), mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IC ]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]	Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IDA]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IC ]	Qed-1; H-2Q1; Qa1; Q1k; Q1d; MGC91064; Qa-1; Q1b	Qed-1; H-2Q1; Qa1; Q1k; Q1d; MGC91064; Qa-1; Q1b
Mus musculus	RefSeq	ILMN_196772	ILMN_196772	H2-Q1	NM_010390.2	NM_010390.2		15006	47551350	NM_010390.2	H2-Q1	NP_034520.1	ILMN_1241491	006960255	S	1034	AGGACTGTGCTCTGGCTCCAAGCAGGGCTGCGCCCAGAGCTCTGATATCT	17	+	35459173-35459222	17qB1	Mus musculus histocompatibility 2, Q region locus 1 (H2-Q1), mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IC ]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]	Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IDA]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IC ]	Qed-1; H-2Q1; Qa1; Q1k; Q1d; MGC91064; Qa-1; Q1b	Qed-1; H-2Q1; Qa1; Q1k; Q1d; MGC91064; Qa-1; Q1b
Mus musculus	MEEBO	ILMN_215467	ILMN_215467	4921517D16RIK	scl49021.2.1_36	XM_148101.1			20892972	XM_148101.1	4921517D16Rik		ILMN_2659905	004920445	S	1693	ACTTGAATACACTAGGCATGTTCTACCAATAACCTACATCCCTAGACCCA										
Mus musculus	RefSeq	ILMN_200554	ILMN_313585	LOC669999	XM_001474242.1	XM_001474242.1		669999	149269940	XM_001474242.1	LOC669999	XP_001474292.1	ILMN_1229443	001070364	S	387	GACCTCAACAGGGGAGAGGACGTCAGAGTTCCGGCAAGTGAAGGAGTTGG					PREDICTED: Mus musculus similar to ribosomal protein (LOC669999), mRNA.					
Mus musculus	RefSeq	ILMN_202675	ILMN_315227	LOC625175	XM_001474132.1	XM_001474132.1		625175	149254731	XM_001474132.1	LOC625175	XP_001474182.1	ILMN_2551437	007150735	S	785	CGCTTGCGTACTAGGAGGGCGTTGTTGCGGGAGGCATGTGCTGATTTCTC				5qG3	PREDICTED: Mus musculus region containing RIKEN cDNA 1700028E10 gene; hypothetical protein A630054D14 (LOC625175), mRNA.					
Mus musculus	RefSeq	ILMN_193515	ILMN_315227	LOC625175	XM_001474132.1	XM_001474132.1		625175	149254731	XM_001474132.1	LOC625175	XP_001474182.1	ILMN_2497906	005270215	S	100	TTTAGGAATTTCAGAGGTCCTTGCTGTCAAAGATTTAAATAAAGTCAAAC				5qG3	PREDICTED: Mus musculus region containing RIKEN cDNA 1700028E10 gene; hypothetical protein A630054D14 (LOC625175), mRNA.					
Mus musculus	RefSeq	ILMN_197280	ILMN_197280	LOC228252	XM_141138.3	XM_141138.3			38074943	XM_141138.3	LOC228252		ILMN_1243968	000460452	S	817	CAAGAAGCTTCAGGAAGTTTCCAGGGTCCAACTGTCACTTTACAGCTACC										
Mus musculus	Riken	ILMN_201644	ILMN_201644	FBXW2	ri|1110031P16|R000017I12|AK004015|1426					AK004015	Fbxw2		ILMN_1258671	004060653	S	1278	AGTGGTTGGCTGCTAAGTGAGTAAAACAAGCAACACCCTGGGCTATCGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]			
Mus musculus	MEEBO	ILMN_216832	ILMN_216832	ALAS2	scl54562.12.1_64	NM_009653.1			33859501	NM_009653.1	Alas2		ILMN_2675874	004480541	S	1733	CGTCCTGTGCACTTTGAACTTATGAGCGAGTGGGAGCGATCCTACTTTGG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 42541] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways involving any member of a large group of derivatives or analogs of porphyrin. Porphyrins consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6778] [evidence IEA]; The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next [goid 33014] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IMP]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2 [goid 3870] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the reaction: succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2 [goid 3870] [evidence ISO]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]		
Mus musculus	RefSeq	ILMN_252624	ILMN_252624	GM597	NM_001013750.1	NM_001013750.1		210962	85719315	NM_001013750.1	Gm597	NP_001013772.1	ILMN_2973504	003390494	S	2702	AGCAGTTTGCTCTTGTTGCCCAGGGAGCCTATGACCGGAGGTAGACCTAC	1	-	28833097-28833103:28833104-28833146	1qA5	Mus musculus gene model 597, (NCBI) (Gm597), mRNA.					
Mus musculus	MEEBO	ILMN_193252	ILMN_193252	0610037M15RIK	scl0068395.1_77						0610037M15Rik		ILMN_2495446	005820128	S	5	GACCGCACAGAGATACTACAACCAGAGCAAGGGCGGCTCTCACACACTCC										
Mus musculus	RefSeq	ILMN_217101	ILMN_309955	LOC100047634	XR_032896.1	XR_032896.1		100047634	149255642	XR_032896.1	LOC100047634		ILMN_1215644	004230010	S	4400	GGGTTGGTGGTGTACAGAACGCACGTAAGTGTGATAACTATTATGACTTC					PREDICTED: Mus musculus similar to Eukaryotic translation initiation factor 2 alpha kinase 3 (LOC100047634), misc RNA.					
Mus musculus	RefSeq	ILMN_224071	ILMN_316573	EG433623	XR_035583.1	XR_035583.1		433623	149251590	XR_035583.1	EG433623		ILMN_2774210	004490273	S	355	GCCACACCAGCCCTTTGGATTTGAAAAGTACATCACTCGAGATTCCTTCT				3qF2.1	PREDICTED: Mus musculus predicted gene, EG433623 (EG433623), misc RNA.					
Mus musculus	RefSeq	ILMN_218525	ILMN_218525	OLFR1496	NM_146989.1	NM_146989.1		258991	22128958	NM_146989.1	Olfr1496	NP_667200.1	ILMN_2696865	007570026	S	768	CATTGTAGGGGTTTACTTTTTCCCTTCATCCACTCACCCTGAGGACACAG	19	+	13855871-13855920	19qA	Mus musculus olfactory receptor 1496 (Olfr1496), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR127-1	MOR127-1
Mus musculus	RefSeq	ILMN_259052	ILMN_259052	LY6G6E	NM_027366.1	NM_027366.1		70274	51243046	NM_027366.1	Ly6g6e	NP_081642.1	ILMN_2991389	001470070	S	954	CCCGAGGGTCTCAAGAACAGAGGGCTACCTTGGGGAACCATAAAGAGTGT	17	+	35215301-35215350	17qB1	Mus musculus lymphocyte antigen 6 complex, locus G6E (Ly6g6e), mRNA.				G6e; 2310011I02Rik	G6e; 2310011I02Rik
Mus musculus	RefSeq	ILMN_218849	ILMN_259052	LY6G6E	NM_027366.1	NM_027366.1		70274	51243046	NM_027366.1	Ly6g6e	NP_081642.1	ILMN_1215409	004730725	S	199	TGAGCTGTACCTGCCATGGGCCCGTCCAGCGCCTTCCTTGGCGTCCTGTT	17	+	35214085-35214099:35214100-35214134	17qB1	Mus musculus lymphocyte antigen 6 complex, locus G6E (Ly6g6e), mRNA.				G6e; 2310011I02Rik	G6e; 2310011I02Rik
Mus musculus	RefSeq	ILMN_219858	ILMN_245817	DSG1A	XM_904434.2	XM_904434.2		13510	94404716	XM_904434.2	Dsg1a	XP_909527.1	ILMN_2714480	004120446	S	5203	AGGCCACACTATGTCTAATTTTAACAGTATAGAAAATGTACAGTTTTGCT				18qA2	PREDICTED: Mus musculus desmoglein 1 alpha, transcript variant 3 (Dsg1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence TAS]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198432	ILMN_239665	LOC638794	XM_914939.1	XM_914939.1		638794	82999312	XM_914939.1	LOC638794	XP_920032.1	ILMN_1217511	003990471	S	1213	TATAGCATCCGAGACACGCATGAGACAGCCGCAGTGTACCGTAGCCCGCC					PREDICTED: Mus musculus similar to cytochrome P450, family 26, subfamily C, polypeptide 1 (LOC638794), mRNA.					
Mus musculus	RefSeq	ILMN_214812	ILMN_256284	TEX22	NM_029381.1	NM_029381.1		75671	58037426	NM_029381.1	Tex22	NP_083657.1	ILMN_2652235	007150253	S	1074	CGCATGTGTTGGCCGAGCTGATGTCTGAGGGTGTAGAGAGAGATGTACTC	12	+	114312954-114313003	12qF1	Mus musculus testis expressed gene 22 (Tex22), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			1700028O09Rik; AV210422; Tep22	1700028O09Rik; AV210422; Tep22
Mus musculus	RefSeq	ILMN_213819	ILMN_213819	TMEM131	NM_018872.2	NM_018872.2		56030	119372305	NM_018872.2	Tmem131	NP_061360.2	ILMN_2641124	002140736	S	5550	AGCGGCTTGTGGTCCACCACTCCATTCAGCAGCTCCATCTGGTCCAGCAA	1	-	36849982-36850031	1qB	Mus musculus transmembrane protein 131 (Tmem131), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			YR-23; CC28; mKIAA0257; Neg; RW1; 2610524E03Rik; D1Bwg0491e	YR-23; CC28; mKIAA0257; Neg; RW1; 2610524E03Rik; D1Bwg0491e
Mus musculus	RefSeq	ILMN_243532	ILMN_243532	ALG10B	NM_001033441.1	NM_001033441.1		380959	85701950	NM_001033441.1	Alg10b	NP_001028613.1	ILMN_2817021	005090379	S	3392	GCCGCTTACTTCTAGGGAATGGTTTAGGGTACGATGTTTCCAGTGTGGAC	15	+	90057986-90058035	15qE3	Mus musculus asparagine-linked glycosylation 10 homolog B (yeast, alpha-1,2-glucosyltransferase) (Alg10b), mRNA. XM_922905	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AA469671; Gm917; AU045404; C85569; AW123895	AA469671; Gm917; AU045404; C85569; AW123895
Mus musculus	MEEBO	ILMN_195932	ILMN_195932	4933434C23RIK	scl53880.1.3_24				51772338	XM_489362	4933434C23Rik		ILMN_1224689	005570670	S	1	GTGCCTGCATGTCACAATAACCAGACCCAACAGAATCTTGAGAAATGAAA										
Mus musculus	RefSeq	ILMN_209369	ILMN_209369	B230120H23RIK	NM_023057.1	NM_023057.1		65964	12746435	NM_023057.1	B230120H23Rik	NP_075544.1	ILMN_2662885	007510360	S	1525	TGGAGAAGTGGATCGTGGGAATAGCGGAGGATCAGACTGTGGAGTGCACG	2	+	72236083-72236132	2qC3	Mus musculus RIKEN cDNA B230120H23 gene (B230120H23Rik), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IDA]	AV006891; MLTKalpha; MLTKbeta; MLTK; Zak	AV006891; MLTKalpha; MLTKbeta; MLTK; Zak
Mus musculus	RefSeq	ILMN_197492	ILMN_197492	LOC241942	XM_143170.2	XM_143170.2			38076250	XM_143170.2	LOC241942		ILMN_1214169	001070193	S	1370	CAGAAGGGAGAGAGAAGCCAGCTCTGCAGCAAGTTCAGGTTGTGGTGGGC										
Mus musculus	RefSeq	ILMN_221974	ILMN_221974	MTAP	NM_024433.1	NM_024433.1		66902	45544617	NM_024433.1	Mtap	NP_077753.1	ILMN_2742867	004050328	S	2018	CCCATGTTGCAGTGCTCCCATCTCTGGCTGTAAGCAGTCCGTGGAGACTC	4	+	88826510-88826559	4qC4	Mus musculus methylthioadenosine phosphorylase (Mtap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor) [goid 16763] [evidence IEA]; Catalysis of the reaction: 5'-methylthioadenosine + phosphate = adenine + 5-methylthio-D-ribose 1-phosphate [goid 17061] [evidence IEA]	MSAP; 1300019I21Rik	MSAP; 1300019I21Rik
Mus musculus	RefSeq	ILMN_221974	ILMN_221974	MTAP	NM_024433.1	NM_024433.1		66902	45544617	NM_024433.1	Mtap	NP_077753.1	ILMN_2879486	005080594	S	2135	CCACTGCGGGGTGGGCATCCGTTTTGTTGCCTTTAGAAAATGCTGCTCTC	4	+	88826627-88826676	4qC4	Mus musculus methylthioadenosine phosphorylase (Mtap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor) [goid 16763] [evidence IEA]; Catalysis of the reaction: 5'-methylthioadenosine + phosphate = adenine + 5-methylthio-D-ribose 1-phosphate [goid 17061] [evidence IEA]	MSAP; 1300019I21Rik	MSAP; 1300019I21Rik
Mus musculus	RefSeq	ILMN_188079	ILMN_253207	CNRIP1	NM_029861.2	NM_029861.2		380686	141802989	NM_029861.2	Cnrip1	NP_084137.1	ILMN_1231506	000650070	S	1377	GTTGTGGAATTGGACCTGTGGCTCATCCCTTTGGCAAGCTACCATAGACT	11	+	16979213-16979262	11qA2	Mus musculus cannabinoid receptor interacting protein 1 (Cnrip1), mRNA.				RP23-348N2.3; AI854501; 5330437A18Rik; C2orf32; 3110054C06Rik	RP23-348N2.3; AI854501; 5330437A18Rik; C2orf32; 3110054C06Rik
Mus musculus	RefSeq	ILMN_200410	ILMN_200410	LOC383206	XM_356923.1	XM_356923.1			38081716	XM_356923.1	LOC383206		ILMN_1240234	001450332	S	73	AGTCAACCTCAGCCCAGTGTCCTTGCGGTGGGACGTAGGCATCTTCTCTC										
Mus musculus	RefSeq	ILMN_195400	ILMN_329395	LOC100046546	XR_032715.1	XR_032715.1		100046546	149255586	XR_032715.1	LOC100046546		ILMN_2515256	001450538	S	310	GGGAAAACTAATAAGCTTCTTATCTACTCTGGATCCACTTTGCAATCTGG					PREDICTED: Mus musculus similar to IgM (kappa)light-chain (LOC100046546), misc RNA.					
Mus musculus	MEEBO	ILMN_185384	ILMN_185384	EXTL1	scl24848.1.1_68				9624985	NM_019578	Extl1		ILMN_1215877	001340133	S	2680	CCAATCTTGACCACTAGAGGTCAGCTGCTGCACTACTCTCCCTTCAAAGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185384	ILMN_185384	EXTL1	scl24848.1.1_68				9624985	NM_019578	Extl1		ILMN_1214976	002760564	S	1	GACCAGGTTCCCAGGGAGGCACTGGAAGTGCCATGCTGAATAAGAGTAAT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199072	ILMN_199072	LOC231046	XM_124482.5	XM_124482.5			38090735	XM_124482.5	LOC231046		ILMN_2533950	005870332	S	166	ATCATTCAAAGTGCTAAAACTGGTAGCTTCAAACACCTTACAGTGAAGGA										
Mus musculus	RefSeq	ILMN_198834	ILMN_244153	LOC637896	XM_913705.3	XM_913705.3		637896	149257439	XM_913705.3	LOC637896	XP_918798.3	ILMN_1256588	000460348	S	2231	GCACTAAGGGCAAGGCTATGGTTGCTGTGGAGGTCTTCTGTATATTGGCC				7qD3	PREDICTED: Mus musculus similar to putative pheromone receptor (LOC637896), mRNA.					
Mus musculus	RefSeq	ILMN_219936	ILMN_219936	SLC8A2	NM_148946.2	NM_148946.2		110891	40254192	NM_148946.2	Slc8a2	NP_683748.1	ILMN_2715429	005080064	S	3461	GCACATCTTGAACCCACTACTTCTGACATTCCAGCGCCCTACTCACCCTC	7	+	16745086-16745135	7qA2	Mus musculus solute carrier family 8 (sodium/calcium exchanger), member 2 (Slc8a2), mRNA. XM_982202 XM_982243	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Ncx2	Ncx2
Mus musculus	RefSeq	ILMN_219936	ILMN_219936	SLC8A2	NM_148946.2	NM_148946.2		110891	40254192	NM_148946.2	Slc8a2	NP_683748.1	ILMN_2960263	005860279	S	3812	AGAGGAGACCGAGGGTCCCAGAGGACCAATGCTACAAGCCAGCAAATGCT	7	+	16745437-16745486	7qA2	Mus musculus solute carrier family 8 (sodium/calcium exchanger), member 2 (Slc8a2), mRNA. XM_982202 XM_982243	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Ncx2	Ncx2
Mus musculus	RefSeq	ILMN_222572	ILMN_222572	PBK	NM_023209.1	NM_023209.1		52033	12963574	NM_023209.1	Pbk	NP_075698.1	ILMN_2929896	002900300	S	1475	GCCTGTCAGCCCATGCGCCCTGGGACTTGAGAAGAGTTCATAAACGTAGC	14	+	64771761-64771810	14qD1	Mus musculus PDZ binding kinase (Pbk), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2810434B10Rik; D14Ertd732e; TOPK; AW538537	2810434B10Rik; D14Ertd732e; TOPK; AW538537
Mus musculus	RefSeq	ILMN_209324	ILMN_209324	KRT6B	NM_010669.2	NM_010669.2		16688	113195683	NM_010669.2	Krt6b	NP_034799.2	ILMN_2594736	001090730	S	1646	GCCTCAGCTCTTCTGGTGGCCTCAGCTCTTCCACCATCAAATACACCACC	15	-	101506995-101507044	15qF2	Mus musculus keratin 6B (Krt6b), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [evidence IGI]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IGI]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt2-6b; mK6[b]; MGC141272; BB144589	Krt2-6b; mK6[b]; MGC141272; BB144589
Mus musculus	RefSeq	ILMN_209324	ILMN_209324	KRT6B	NM_010669.2	NM_010669.2		16688	113195683	NM_010669.2	Krt6b	NP_034799.2	ILMN_1235713	000670397	S	1664	GCCTCAGCTCTTCCACCATCAAATACACCACCAGCGCCTCCTCCAGCAGG	15	-	101506977-101507026	15qF2	Mus musculus keratin 6B (Krt6b), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [evidence IGI]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IGI]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Krt2-6b; mK6[b]; MGC141272; BB144589	Krt2-6b; mK6[b]; MGC141272; BB144589
Mus musculus	Riken	ILMN_201807	ILMN_201807	2600013E07RIK	ri|2600013E07|ZX00060F19|AK011195|733					AK011195	2600013E07Rik		ILMN_1236746	000150070	S	619	TGGGGCAGCTATAGAAATAACTGTGTCCCCACGGTTCTGCTCAGCCTTCC										
Mus musculus	Riken	ILMN_202630	ILMN_202630	CHD1	ri|C330007M07|PX00075N05|AK021188|1027					AK021188	Chd1		ILMN_1254296	005690754	S	867	GATGAAGACTGGCAGATGTCTGGGTCCGGATCTCCATCTCAGTCTGGTTC						The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The formation or destruction of chromatin structures [goid 6333] [evidence NAS]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence NAS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	Riken	ILMN_204948	ILMN_204948	SRRP86	ri|D330015M06|PX00191H19|AK052265|1688					AK052265	SRRP86		ILMN_1226902	001980424	S	107	TCGTGGACGTTGGGGAGCGGGAAGGCAGCAGCAGCGAGGCCGGGATGAAC										
Mus musculus	MEEBO	ILMN_210584	ILMN_210584	OLFR1311	scl18872.1.1_104				22129738	NM_146274	Olfr1311		ILMN_2607095	006860097	S	661	TTTTGGTGACTGTTAGGAAACACTCTTCAGGCAGCATAGCCAAGGCCCTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_215206	ILMN_215206	MGAT5	NM_145128.3	NM_145128.3		107895	126215533	NM_145128.3	Mgat5	NP_660110.2	ILMN_3096212	000830253	A	2984	CCGCTCCAGCCACAGCCAGTGCATCCCAGTTTACACCAAAACCACAAGGG	1	+	129379429-129379478	1qE3	Mus musculus mannoside acetylglucosaminyltransferase 5 (Mgat5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl,1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-(N-acetyl-beta-D-glucosaminyl-1,6)-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R. Only branched mannose glycopeptides with non-reducing N-acetylglucosamine terminal residues act as acceptors [goid 30144] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IMP]	4930471A21Rik; GlcNAc-TV; AI480971; 5330407H02Rik	4930471A21Rik; GlcNAc-TV; AI480971; 5330407H02Rik
Mus musculus	Riken	ILMN_202835	ILMN_202835	6720436C02RIK	ri|6720436C02|PX00059B05|AK032776|2118					AK032776	6720436C02Rik		ILMN_1258064	006060446	S	1611	GCTGGCATCAATCTATTGAGTTTGAATCAAGGAGGAAGACAGGCGAGGAG										
Mus musculus	RefSeq	ILMN_250105	ILMN_250105	2610020H08RIK	NM_001004187.1	NM_001004187.1		434234	51921366	NM_001004187.1	2610020H08Rik	NP_001004187.1	ILMN_3065642	006110328	I	391	GTATGCAGTTCTGGGTAAATCTGCTGTTCCTAAACCCAGCTGGTGCCAGC	7	+	126943153-126943191:126944744-126944754	7qF2	Mus musculus RIKEN cDNA 2610020H08 gene (2610020H08Rik), transcript variant 1, mRNA.				MGC59529	MGC59529
Mus musculus	RefSeq	ILMN_250105	ILMN_250105	2610020H08RIK	NM_001004187.1	NM_001004187.1		434234	51921366	NM_001004187.1	2610020H08Rik	NP_001004187.1	ILMN_3143621	001260661	A	1551	CTCTTGTTCTTGAAACTTACAGGTGCTTTTGGGTCGCACCCTGGCCTAGG	7	+	126977893-126977915:126992246-126992272	7qF2	Mus musculus RIKEN cDNA 2610020H08 gene (2610020H08Rik), transcript variant 1, mRNA.				MGC59529	MGC59529
Mus musculus	RefSeq	ILMN_212483	ILMN_212483	SPATA21	NM_177867.3	NM_177867.3		329972	141802358	NM_177867.3	Spata21	NP_808535.1	ILMN_2626950	006760326	S	2368	AGAAAGTGGCTTAGCTCCATGCCAGCTCGAACCCACTGACCCTCCGGAAC	4	+	140668529-140668567:140668568-140668578	4qD3	Mus musculus spermatogenesis associated 21 (Spata21), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RP23-183L1.9; 4933414G08	RP23-183L1.9; 4933414G08
Mus musculus	RefSeq	ILMN_217799	ILMN_217799	MESP1	NM_008588.1	NM_008588.1		17292	33469090	NM_008588.1	Mesp1	NP_032614.1	ILMN_2687727	002510086	S	1001	AGGCGCCCAATAGGGTACACGCTCTAAAGATGAAGCAGGCACAAGCTTTG	7	-	86937169-86937218	7qD3	Mus musculus mesoderm posterior 1 (Mesp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Movement of the anterior ectoderm to the interior of the embryo [goid 8258] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The orderly movement of mesodermal cells from one site to another [goid 8078] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MGC159208; MGC159210	MGC159208; MGC159210
Mus musculus	RefSeq	ILMN_216416	ILMN_216416	BAT1A	NM_019693.2	NM_019693.2		53817	31542217	NM_019693.2	Bat1a	NP_062667.1	ILMN_2670895	005860402	S	2725	GACACCGACGCCTCTGCCCACCCTATCTATGCTTCTCTCTGCGTCACCAC	17	+	35381102-35381117:35380185-35380218	17qB1	Mus musculus HLA-B-associated transcript 1A (Bat1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC38799; AI428441; 0610030D10Rik; Bat1; Bat-1; D17H6S81E-1; D6S81Eh; D17H6S81E; MGC19235	MGC38799; AI428441; 0610030D10Rik; Bat1; Bat-1; D17H6S81E-1; D6S81Eh; D17H6S81E; MGC19235
Mus musculus	RefSeq	ILMN_216416	ILMN_216416	BAT1A	NM_019693.2	NM_019693.2		53817	31542217	NM_019693.2	Bat1a	NP_062667.1	ILMN_3007669	004120390	S	2438	GAACATTGCTTTCAACTATGACATGCCAGAGGACTCGGACACCTACCTGC	17	+	35380815-35380864	17qB1	Mus musculus HLA-B-associated transcript 1A (Bat1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC38799; AI428441; 0610030D10Rik; Bat1; Bat-1; D17H6S81E-1; D6S81Eh; D17H6S81E; MGC19235	MGC38799; AI428441; 0610030D10Rik; Bat1; Bat-1; D17H6S81E-1; D6S81Eh; D17H6S81E; MGC19235
Mus musculus	RefSeq	ILMN_192374	ILMN_247101	3632451O06RIK	NM_026142.1	NM_026142.1		67419	13385649	NM_026142.1	3632451O06Rik	NP_080418.1	ILMN_2753589	000010592	S	2928	ATTACATGCAGGTCTGTGTGTATCTTGCATTAAATTTTCCAGCCTCTTGT	14	-	48603701-48603750	14qC1	Mus musculus RIKEN cDNA 3632451O06 gene (3632451O06Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU067705	AU067705
Mus musculus	Riken	ILMN_203200	ILMN_203200	EPB4.1L1	ri|A930039B10|PX00067P08|AK044744|2920					AK044744	Epb4.1l1		ILMN_2555477	002120193	S	2737	TTCCTCAGCAGAAGAAGCCTGGTCCCCCCAGGGACCGTGGAAGACCTGAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_202384	ILMN_202384	4930535I16RIK	ri|4930535I16|PX00034M17|AK015982|1068					AK015982	4930535I16Rik		ILMN_1255182	005270348	S	693	TACTATCACGTGCCCGGAATCACCTGACTAGCAGCGGCAGAAGGGGGGGA										
Mus musculus	RefSeq	ILMN_210734	ILMN_323675	LOC100040919	XR_032278.1	XR_032278.1		100040919	149252391	XR_032278.1	LOC100040919		ILMN_1255629	001070324	S	368	CCTTCCTGACAGGCCTCAACCGCGTCTCAGAGTACCGGAACCACTGTTCC	4	+	49411510-49411559	4qB1	PREDICTED: Mus musculus similar to plasticity-related protein 3 (LOC100040919), misc RNA.					
Mus musculus	MEEBO	ILMN_195152	ILMN_195152	A830021K08RIK	scl45961.1.270_32						A830021K08Rik		ILMN_1233911	005130204	S	9	AGCGCTGGGTAAGGAAAGAAGAGCGGTTTCGAATTCATGGCCCTAGTGAC										
Mus musculus	Riken	ILMN_201934	ILMN_201934	GIN1	ri|8430411H10|PX00024N10|AK018404|783					AK018404	Gin1		ILMN_1245008	003830121	S	412	GCAGTGGGTATGGCTTCCACGCAGGGCTTAGGAGTGTCTTACTGTCTTTC							The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	Riken	ILMN_202441	ILMN_202441	KIF7	ri|4930404H06|PX00029I20|AK015078|1988					AK015078	Kif7		ILMN_1227407	004250187	S	1693	GACTAGGGGTGTAGCTTCACGGCAGAGCACTTGCCTAACATATGAGCACC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184358	ILMN_184358	UBE2I	NM_011665.3	NM_011665.3		22196	142379350	NM_011665.3	Ube2i	NP_035795.1	ILMN_2499058	006960612	S	72	ACAAAAGCGTGTCCAGCGGGGCCAGCAGAAGCCGCACAGGGGTTTCAGGT	17	-	25411115-25411164	17qA3.3	Mus musculus ubiquitin-conjugating enzyme E2I (Ube2i), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with Helix Loop Helix, a domain of 40-50 residues that occurs in specific DNA-binding proteins that act as transcription factors. The domain is formed of two amphipathic helices joined by a variable length linker region that can form a loop and it mediates protein dimerization [goid 43398] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	UBC9; Ubce9; Mmubc9; Ubce2i; 5830467E05Rik	UBC9; Ubce9; Mmubc9; Ubce2i; 5830467E05Rik
Mus musculus	RefSeq	ILMN_184358	ILMN_184358	UBE2I	NM_011665.3	NM_011665.3		22196	142379350	NM_011665.3	Ube2i	NP_035795.1	ILMN_2417991	000430349	S	2463	GGTAAGGAATTGTGGGCAACAGATTAACCACTGTATCTACAAATGCTCTA	17	-	25397478-25397527	17qA3.3	Mus musculus ubiquitin-conjugating enzyme E2I (Ube2i), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with Helix Loop Helix, a domain of 40-50 residues that occurs in specific DNA-binding proteins that act as transcription factors. The domain is formed of two amphipathic helices joined by a variable length linker region that can form a loop and it mediates protein dimerization [goid 43398] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	UBC9; Ubce9; Mmubc9; Ubce2i; 5830467E05Rik	UBC9; Ubce9; Mmubc9; Ubce2i; 5830467E05Rik
Mus musculus	MEEBO	ILMN_212510	ILMN_212510	4930455C21RIK	scl48481.8.1_48	XM_148429.1			20892492	XM_148429.1	4930455C21Rik		ILMN_2627318	001030189	S	999	AGTGCCAGGCTACTCCGCTACTCCTTGCCAGCCCGCTGACTGATGTGAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201312	ILMN_240653	EG628870	XM_893664.3	XM_893664.3		628870	149261036	XM_893664.3	EG628870	XP_898757.3	ILMN_1232168	003360075	S	6846	CTGCAAGTGCTGTCGTGAAAATGGAGTGCGAAACGTGACGGTGCCTCTGC	10	-	107199439-107199488	10qD1	PREDICTED: Mus musculus predicted gene, EG628870 (EG628870), mRNA.					
Mus musculus	RefSeq	ILMN_223903	ILMN_234588	MOXD2	NM_139296.2	NM_139296.2		194357	134948566	NM_139296.2	Moxd2	NP_647457.2	ILMN_2771252	002710192	S	1653	TATTATACCAACTCCTCGAGGACCATGCTTAGAGTCTACTGGAGGCAAGG	6	-	40833828-40833832:40834006-40834050	6qB1	Mus musculus monooxygenase, DBH-like 2 (Moxd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3,4-dihydroxyphenethylamine + ascorbate + O2 = noradrenaline + dehydroascorbate + H2O [goid 4500] [evidence IEA]	Dbhl1	Dbhl1
Mus musculus	RefSeq	ILMN_221425	ILMN_221425	0610010D20RIK	NM_026152.1	NM_026152.1		67432	13385655	NM_026152.1	0610010D20Rik	NP_080428.1	ILMN_2735415	003190008	S	914	AAGAAAACCATGGACTGGTTTGGCTACTATGGAGGTCCCTGCCGCGCCCC	19	+	42144708-42144757	19qC3	Mus musculus RIKEN cDNA 0610010D20 gene (0610010D20Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221425	ILMN_221425	0610010D20RIK	NM_026152.1	NM_026152.1		67432	13385655	NM_026152.1	0610010D20Rik	NP_080428.1	ILMN_2735413	002850424	S	911	TGAAGAAAACCATGGACTGGTTTGGCTACTATGGAGGTCCCTGCCGCGCC	19	+	42144705-42144754	19qC3	Mus musculus RIKEN cDNA 0610010D20 gene (0610010D20Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215481	ILMN_215481	ZFAND1	NM_025512.2	NM_025512.2		66361	31982673	NM_025512.2	Zfand1	NP_079788.2	ILMN_2660056	000360224	S	1279	GTCCTATGATTAAACCTCATATTATGTCCAGAATACATAGCCTTACTGGA	3	-	10340218-10340267	3qA1	Mus musculus zinc finger, AN1-type domain 1 (Zfand1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2310008M20Rik; MGC107161; AW048890	2310008M20Rik; MGC107161; AW048890
Mus musculus	RefSeq	ILMN_253102	ILMN_253102	BAHD1	NM_001045523.1	NM_001045523.1		228536	113930704	NM_001045523.1	Bahd1	NP_001038988.1	ILMN_2830098	002600025	S	4037	GAGTGGAGATGGACCCCTTTGGAGCCTGCTCGTTCTAGGGTGCTACCAAG	2	+	118749869-118749918	2qE5	Mus musculus bromo adjacent homology domain containing 1 (Bahd1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA0945; AW541238; mKIAA0945; AL022997; Gm117; MGC117747	KIAA0945; AW541238; mKIAA0945; AL022997; Gm117; MGC117747
Mus musculus	RefSeq	ILMN_197407	ILMN_253102	BAHD1	NM_001045523.1	NM_001045523.1		228536	113930704	NM_001045523.1	Bahd1	NP_001038988.1	ILMN_1256046	007320538	S	2395	GGACACGGACCCTGAGCTGGTGTTCCTTTGCCGCCATGTCTATGACTTCC	2	+	118748227-118748276	2qE5	Mus musculus bromo adjacent homology domain containing 1 (Bahd1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA0945; AW541238; mKIAA0945; AL022997; Gm117; MGC117747	KIAA0945; AW541238; mKIAA0945; AL022997; Gm117; MGC117747
Mus musculus	MEEBO	ILMN_194841	ILMN_194841	SCL0002180.1_25	scl0002180.1_25	AK078916.1			26347618	AK078916.1	scl0002180.1_25		ILMN_2510122	004290707	S	20	CAAATATGTCAACTAAGTTAGAAGGTCTTTCCTCTTTTAGCCTTGTTTGG										
Mus musculus	RefSeq	ILMN_220478	ILMN_220478	TBC1D25	NM_172478.2	NM_172478.2		209815	142359040	NM_172478.2	Tbc1d25	NP_766066.1	ILMN_2722583	004880196	S	2317	GGGCGTGTCTTGCGTAGGGCCAAAGCACTCTTTGCTGATTACCTACAGTC	X	-	7731879-7731928	XqA1.1	Mus musculus TBC1 domain family, member 25 (Tbc1d25), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence ISO]	DXHXS7927e; 6330576A08Rik; mMg81; Oatl1; A530047E07	DXHXS7927e; 6330576A08Rik; mMg81; Oatl1; A530047E07
Mus musculus	MEEBO	ILMN_222429	ILMN_222429	6720467C03RIK	scl0002739.1_51				33416517	BC055848	6720467C03Rik		ILMN_2749495	000940017	S	1096	ATATAAAACTCGAATACTAATCCCCTGGGGATAACTATAAGAAAAATGTT								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_196406	ILMN_196406	4933409L06RIK	XM_129509.4	XM_129509.4			38073516	XM_129509.4	4933409L06Rik		ILMN_2524020	003710064	S	9073	TTTGCTGAGGATCCCAACGTGAATCAGCCTGTCTGGATGAAGCCATGCAG										
Mus musculus	RefSeq	ILMN_221104	ILMN_221104	FAM151A	NM_146149.1	NM_146149.1		230579	22165387	NM_146149.1	Fam151a	NP_666261.1	ILMN_2731127	001010605	S	1736	GGCCGTGGACAGGACCCGAGTCTATTACAGGATATCCCAGGAGTACTGGA	4	+	106420736-106420785	4qC7	Mus musculus family with sequence simliarity 151, member A (Fam151a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC37700; RP23-97O7.7; 2010309H15Rik	MGC37700; RP23-97O7.7; 2010309H15Rik
Mus musculus	RefSeq	ILMN_221104	ILMN_221104	FAM151A	NM_146149.1	NM_146149.1		230579	22165387	NM_146149.1	Fam151a	NP_666261.1	ILMN_2951292	005820114	S	1118	GAGAAGAGCAGCCATTACAGTTCCTGACAGAGAAGGCATGATCTTGCTGG	4	+	106419696-106419721:106420144-106420167	4qC7	Mus musculus family with sequence simliarity 151, member A (Fam151a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC37700; RP23-97O7.7; 2010309H15Rik	MGC37700; RP23-97O7.7; 2010309H15Rik
Mus musculus	RefSeq	ILMN_241928	ILMN_241928	D4ERTD22E	NM_001025608.1	NM_001025608.1		213491	71043933	NM_001025608.1	D4Ertd22e	NP_001020779.1	ILMN_3129206	002370593	A	3174	CTCACCCTAACCCCCACCGCGGGCTCCTGAGTCGGCAGATTAAGCATTTT	4	-	140668966-140669015	4qD3	Mus musculus DNA segment, Chr 4, ERATO Doi 22, expressed (D4Ertd22e), transcript variant 1, mRNA.				1110022I03; RP23-183L1.10	1110022I03; RP23-183L1.10
Mus musculus	RefSeq	ILMN_207055	ILMN_221260	SP7	NM_130458.3	NM_130458.3		170574	148747346	NM_130458.3	Sp7	NP_569725.1	ILMN_1231074	000010221	S	1678	GCTTCCAGGCTGTCGCCTCGATTCCCCCTGAGCTTTGTGTTTTCTTTTTT				15qF3	Mus musculus Sp7 transcription factor 7 (Sp7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]	Osx; 6430578P22Rik; MGC130562; C22	Osx; 6430578P22Rik; MGC130562; C22
Mus musculus	RefSeq	ILMN_211986	ILMN_211986	1110007L15RIK	NM_026269.1	NM_026269.1		67604	21312885	NM_026269.1	1110007L15Rik	NP_080545.2	ILMN_2745954	007610575	S	659	GTGAGGTGGACATGTTCGTGGCTCAGGCTGTGCTACAGTTTCTCTGTTTG	5	+	139741683-139741719:139742958-139742970	5qG2	Mus musculus RIKEN cDNA 1110007L15 gene (1110007L15Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW412535	AW412535
Mus musculus	RefSeq	ILMN_211986	ILMN_211986	1110007L15RIK	NM_026269.1	NM_026269.1		67604	21312885	NM_026269.1	1110007L15Rik	NP_080545.2	ILMN_2621471	005270747	S	1239	CAGGACCAAGAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAG	5	+	139745188-139745237	5qG2	Mus musculus RIKEN cDNA 1110007L15 gene (1110007L15Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW412535	AW412535
Mus musculus	RefSeq	ILMN_211986	ILMN_211986	1110007L15RIK	NM_026269.1	NM_026269.1		67604	21312885	NM_026269.1	1110007L15Rik	NP_080545.2	ILMN_2622829	005890424	S	1717	CTGCTCTGGCGAGGTTTTAAAGGGTGCCATGGGCTCTCACGTCCTTCGTG	5	+	139745666-139745715	5qG2	Mus musculus RIKEN cDNA 1110007L15 gene (1110007L15Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW412535	AW412535
Mus musculus	RefSeq	ILMN_211986	ILMN_211986	1110007L15RIK	NM_026269.1	NM_026269.1		67604	21312885	NM_026269.1	1110007L15Rik	NP_080545.2	ILMN_2621472	002680612	S	1249	GAGCAAGGCCCAGCTTCTGCTGGCCAATCGTGTTCCTTCAGATCACCCAC	5	+	139745198-139745247	5qG2	Mus musculus RIKEN cDNA 1110007L15 gene (1110007L15Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW412535	AW412535
Mus musculus	RefSeq	ILMN_248527	ILMN_248527	4930467M19RIK	NM_181347.1	NM_181347.1		353205	110626174	NM_181347.1	4930467M19Rik	NP_851992.1	ILMN_2995646	006900079	S	2102	AGCAAACACCAGGTCAGGCTCCACTTCAGTCAGAGGATCTGTCGGTGCCC					Mus musculus RIKEN cDNA 4930467M19 gene (4930467M19Rik), mRNA.					
Mus musculus	MEEBO	ILMN_217922	ILMN_217922	C430039G08RIK	scl077600.1_62	XM_147492.1			20882835	XM_147492.1	C430039G08Rik		ILMN_1226680	001030136	S	402	CTTTCCTCTTGGGCCTCAGCGTTTGTCGGGCCACCTCCCGTCCGACCCTC										
Mus musculus	MEEBO	ILMN_189076	ILMN_189076	2810455B08RIK	scl48570.1.1_278						2810455B08Rik		ILMN_2458130	002690546	S	8	CCTTACTCTTGTGAGCACACTTACCTTTGCCCACTGAAGGCAGGGCTTCC										
Mus musculus	RefSeq	ILMN_218411	ILMN_218411	IL25	NM_080729.2	NM_080729.2		140806	118131057	NM_080729.2	Il25	NP_542767.1	ILMN_2695495	002190075	S	565	TACAATCACCTTGCCAATGCGGGCCGGGTTCAAGCCCTCCAAAGCCCTAC	14	+	55554251-55554300	14qC3	Mus musculus interleukin 25 (Il25), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus [goid 9620] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode [goid 9624] [evidence IDA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specializes features of an eosinophil [goid 30222] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Interacting selectively with the interleukin-17E receptor [goid 30380] [evidence ISA]	Il17e; IL-17E	Il17e; IL-17E
Mus musculus	RefSeq	ILMN_214477	ILMN_311987	LOC100043906	XM_001481214.1	XM_001481214.1		100043906	149268944	XM_001481214.1	LOC100043906	XP_001481264.1	ILMN_2648376	002760097	S	1553	GCACTACAGAGGCATGAAAACGAGTCTGTATACAAGGCCTCATTGAACTT	17	-	90308184-90308233	17qE5	PREDICTED: Mus musculus similar to nuclear pore-targeting complex component of 58 kDa, transcript variant 1 (LOC100043906), mRNA.					
Mus musculus	MEEBO	ILMN_214181	ILMN_214181	1700016D02RIK	scl0075535.1_15	XM_358455.1			38075934	XM_358455.1	1700016D02Rik		ILMN_2645234	004670142	S	282	GAGAGCCACGATAATCCAGCTTCTGCAGAATATTTCAGACCTACGGGAGG										
Mus musculus	RefSeq	ILMN_217401	ILMN_217401	COPS7A	NM_012003.1	NM_012003.1		26894	7242141	NM_012003.1	Cops7a	NP_036133.1	ILMN_2682787	007160048	S	868	AACACCTGACAGAGCTGAGAGAACCAGCTTCTGGCACCAACCAGCGCCAG	6	-	124909651-124909655:124909817-124909861	6qF2	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana) (Cops7a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D6Ertd35e	D6Ertd35e
Mus musculus	RefSeq	ILMN_217401	ILMN_217401	COPS7A	NM_012003.1	NM_012003.1		26894	7242141	NM_012003.1	Cops7a	NP_036133.1	ILMN_1217296	003890093	S	711	TTGTCGGGCATCGAAGAGCAGGTCAGCCGTGCCAACCAGCACAAGGAGCA	6	-	124910109-124910158	6qF2	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana) (Cops7a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D6Ertd35e	D6Ertd35e
Mus musculus	RefSeq	ILMN_217401	ILMN_217401	COPS7A	NM_012003.1	NM_012003.1		26894	7242141	NM_012003.1	Cops7a	NP_036133.1	ILMN_2875812	000050259	S	1402	CATTCCAGCCTTAGAGTTCTGGAGCCAGTCTGCTACCCTGGGAGTCGCTG	6	-	124909117-124909166	6qF2	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana) (Cops7a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D6Ertd35e	D6Ertd35e
Mus musculus	Riken	ILMN_201629	ILMN_201629	1110019B22RIK	ri|1110019B22|R000014N22|AK003805|1973					AK003805	1110019B22Rik		ILMN_2543332	003780019	S	1583	GAAAGCCTCACATAGCCCGGGATGGCCTCAAACTCTCTACATAGCTAAGG										
Mus musculus	Riken	ILMN_204754	ILMN_204754	4933406L09RIK	ri|B930064K01|PX00164H04|AK047451|1293					AK047451	4933406L09Rik		ILMN_1213433	002320433	S	1034	CATGTGCAGCAGTGTAACAAATGAAACAGTTTGCGTGGTCTCCCTAGCAC										
Mus musculus	RefSeq	ILMN_201274	ILMN_201274	LOC382139	XM_358712.1	XM_358712.1			38090337	XM_358712.1	LOC382139		ILMN_2541711	000460133	S	581	TGGAGCCTTACTCAGTGAAAGACATCAGGCATTCCACACTGCCGGACCCC										
Mus musculus	RefSeq	ILMN_198516	ILMN_329308	LOC100043602	XR_034771.1	XR_034771.1		100043602	149256614	XR_034771.1	LOC100043602		ILMN_2531964	005260707	S	1182	TGATCAATCCCAGCAGGAGGCCAACCATCCACCAAATCATGAGGCACCCC	7	-	22352896-22352945	7qA3	PREDICTED: Mus musculus hypothetical protein LOC100043602 (LOC100043602), misc RNA.					
Mus musculus	Riken	ILMN_202245	ILMN_202245	4930445I03RIK	ri|4930445I03|PX00031M01|AK015391|724					AK015391	4930445I03Rik		ILMN_2548100	004280601	S	534	GAAGACCTGGTGTCTAAAGGGCCACTTTTGGAAGTGGAGGCTGTGAGCCC										
Mus musculus	RefSeq	ILMN_197778	ILMN_319729	LOC631751	XM_001474180.1	XM_001474180.1		631751	149267016	XM_001474180.1	LOC631751	XP_001474230.1	ILMN_1244899	000430730	S	195	GCCGAGTGACTGGCAGAATGAAGGTAAAGGCTGACAGAGATGAGTCCTCT					PREDICTED: Mus musculus similar to 40S ribosomal protein S14 (LOC631751), mRNA.					
Mus musculus	MEEBO	ILMN_213201	ILMN_213201	4930558K02RIK	scl16048.8.1_158	XM_129574.1			20829223	XM_129574.1	4930558K02Rik		ILMN_1235918	002690189	S	769	CCAAGACAGTTTCTGACACTGGTACCTTCCCCTAATCATGTATCTCCCAA										
Mus musculus	RefSeq	ILMN_214653	ILMN_214653	RBM28	NM_133925.1	NM_133925.1		68272	21536243	NM_133925.1	Rbm28	NP_598686.1	ILMN_1231443	002060474	S	2007	GATGCATATTTTGTTATGGAGTCTGTAAGTGAGGAACTATGACTTTTTGG	6	-	29075076-29075125	6qA3.3	Mus musculus RNA binding motif protein 28 (Rbm28), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI503051; MGC38664; 2810480G15Rik; MGC12075	AI503051; MGC38664; 2810480G15Rik; MGC12075
Mus musculus	RefSeq	ILMN_214653	ILMN_214653	RBM28	NM_133925.1	NM_133925.1		68272	21536243	NM_133925.1	Rbm28	NP_598686.1	ILMN_2650392	003390228	S	1818	GGGACTCTAGGTTGTGTACATTCATGGTCCGTTCTCCAGTGTGGTGTTGG	6	-	29075265-29075314	6qA3.3	Mus musculus RNA binding motif protein 28 (Rbm28), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI503051; MGC38664; 2810480G15Rik; MGC12075	AI503051; MGC38664; 2810480G15Rik; MGC12075
Mus musculus	RefSeq	ILMN_208722	ILMN_210113	UNKL	NM_028789.3	NM_028789.3		74154	146141224	NM_028789.3	Unkl	NP_083065.1	ILMN_1226861	002190020	S	2545	GATAACAGTAGCACAAAATACACATGATCTAGGTACTGAGCTAATAAATC				17qA3.3	Mus musculus unkempt-like (Drosophila) (Unkl), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC102273; 1300004G08Rik	MGC102273; 1300004G08Rik
Mus musculus	RefSeq	ILMN_210113	ILMN_210113	UNKL	NM_028789.3	NM_028789.3		74154	146141224	NM_028789.3	Unkl	NP_083065.1	ILMN_2602350	004780678	S	607	ACATCAGTGACATCCCTCTCCCCAAGCTGCATTCTCTCCAGAGCAAGCTG				17qA3.3	Mus musculus unkempt-like (Drosophila) (Unkl), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC102273; 1300004G08Rik	MGC102273; 1300004G08Rik
Mus musculus	RefSeq	ILMN_210113	ILMN_210113	UNKL	NM_028789.3	NM_028789.3		74154	146141224	NM_028789.3	Unkl	NP_083065.1	ILMN_2666134	007400279	S	3267	TTTATAATACATAACCATTTACTTTAGTGAATTGTTAAAGTTGTTAACAT				17qA3.3	Mus musculus unkempt-like (Drosophila) (Unkl), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC102273; 1300004G08Rik	MGC102273; 1300004G08Rik
Mus musculus	RefSeq	ILMN_210113	ILMN_210113	UNKL	NM_028789.3	NM_028789.3		74154	146141224	NM_028789.3	Unkl	NP_083065.1	ILMN_2757435	002350209	S	545	GCTGCAGGAAGAATTAGAGGGCCTGGGTTTGTCCTCACTGCCAGGGCTTC				17qA3.3	Mus musculus unkempt-like (Drosophila) (Unkl), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC102273; 1300004G08Rik	MGC102273; 1300004G08Rik
Mus musculus	MEEBO	ILMN_185557	ILMN_185557	TRBV11_AE000663_T_CELL_RECEPTOR_BETA_VARIABLE_11_244	TRBV11_AE000663_T_cell_receptor_beta_variable_11_244						TRBV11_AE000663_T_cell_receptor_beta_variable_11_244		ILMN_2428034	001070689	S	20	GCCCAATCAGTCGCACTCAACTCTGAAGATCCAGAGCACGCAACCCCAGG										
Mus musculus	RefSeq	ILMN_216245	ILMN_309986	LOC100047583	XM_001479138.1	XM_001479138.1		100047583	149267863	XM_001479138.1	LOC100047583	XP_001479188.1	ILMN_2668927	001400053	S	398	GCCAAAGGACAAAATTTCCATCTTGGGAAATGCCCGTCTCCTCCTGTGCA					PREDICTED: Mus musculus similar to apolipoprotein D (LOC100047583), mRNA.					
Mus musculus	RefSeq	ILMN_198810	ILMN_198810	LOC213977	XM_142567.2	XM_142567.2			38087880	XM_142567.2	LOC213977		ILMN_2533006	001580242	S	1279	GTTGAGAGACATTGGGCAATCTATGAATTAGCCTTCAGCCAGCTACAATC										
Mus musculus	RefSeq	ILMN_218748	ILMN_218748	FUNDC1	NM_028058.3	NM_028058.3		72018	146141163	NM_028058.3	Fundc1	NP_082334.1	ILMN_1229913	005690608	S	1577	GGCCAGTTTACTTGTTTCTCTGGGCCAGCCTCACACTTGTTCCGAGCATC				XqA1.2	Mus musculus FUN14 domain containing 1 (Fundc1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810033P05Rik; 1500005J14Rik	1810033P05Rik; 1500005J14Rik
Mus musculus	RefSeq	ILMN_218748	ILMN_218748	FUNDC1	NM_028058.3	NM_028058.3		72018	146141163	NM_028058.3	Fundc1	NP_082334.1	ILMN_2762755	005560168	S	436	AACAAAGCAAAGAGACAGATAAAGAAGCGAGCAAATAAAGCAGCACCTGA				XqA1.2	Mus musculus FUN14 domain containing 1 (Fundc1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810033P05Rik; 1500005J14Rik	1810033P05Rik; 1500005J14Rik
Mus musculus	RefSeq	ILMN_251483	ILMN_251483	NETO1	NM_144946.2	NM_144946.2		246317	31559951	NM_144946.2	Neto1	NP_659195.2	ILMN_2837179	006200086	S	2426	GCCCACCACAAGCCACAGGCTATCCAGACACGAAAAATCTGTCCAGCAGT	18	+	86633247-86633293:86634206-86634208	18qE4	Mus musculus neuropilin (NRP) and tolloid (TLL)-like 1 (Neto1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C130005O10Rik; Btcl1	C130005O10Rik; Btcl1
Mus musculus	RefSeq	ILMN_258448	ILMN_258448	OLFR1419	NM_001011775.1	NM_001011775.1		257938	58801325	NM_001011775.1	Olfr1419	NP_001011775.1	ILMN_3161272	005890678	S	804	CCCGGAAGAAGGCCGGGCAGTATCTGTTGTCTATACCTTCTTCTCCCCAT	19	-	11944851-11944900	19qA	Mus musculus olfactory receptor 1419 (Olfr1419), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR266-10	MOR266-10
Mus musculus	RefSeq	ILMN_215373	ILMN_215373	IL1F9	NM_153511.2	NM_153511.2		215257	142375036	NM_153511.2	Il1f9	NP_705731.1	ILMN_2658704	007040162	S	564	ATTACAACATTAACTTCAATTTAGATATAAAGTCTTAAACTCAGCATGGA	2	+	24048279-24048316:24048317-24048328	2qA3	Mus musculus interleukin 1 family, member 9 (Il1f9), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192936	ILMN_251924	UACA	NM_028283.2	NM_028283.2		72565	118130474	NM_028283.2	Uaca	NP_082559.1	ILMN_2492716	002470161	S	4306	GCAGCTGACTTGGAGCCTGTCCTGCTGGTGCTATGCATTCTGGGTGCAAC	9	+	60728055-60728104	9qB	Mus musculus uveal autoantigen with coiled-coil domains and ankyrin repeats (Uaca), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A multisubunit protein complex involved in the activation of apoptosis. In mammals it is typically composed of seven Apaf-1 subunits bound to cytochrome c and caspase-9. A similar complex to promote apoptosis is formed from homologous gene products in other eukaryotic organisms [goid 43293] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus [goid 42307] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the transfer of NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters, from the cytoplasm into the nucleus, across the nuclear membrane [goid 42347] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that activates or increases the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43280] [evidence IDA]; Any process that activates or increases the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43280] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2700059D02Rik; nucling	2700059D02Rik; nucling
Mus musculus	RefSeq	ILMN_221317	ILMN_221317	BMP3	NM_173404.2	NM_173404.2		110075	142383872	NM_173404.2	Bmp3	NP_775580.1	ILMN_1235433	000940121	S	2028	GTAGTGCTCAAAGTCTACCCTAACATGACAGTCGACTCCTGTGCTTGTAG	5	+	99308895-99308944	5qE3	Mus musculus bone morphogenetic protein 3 (Bmp3), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	9130206H07; 9530029I04Rik	9130206H07; 9530029I04Rik
Mus musculus	RefSeq	ILMN_197620	ILMN_197620	LOC268730	XM_193754.2	XM_193754.2			38076908	XM_193754.2	LOC268730		ILMN_1236308	002570184	S	591	GTCGCAGGAGCTGGAGAGGTTGCAGGCGAGATTGCAGATGCAGATCCTGA										
Mus musculus	RefSeq	ILMN_215653	ILMN_310411	LOC100047184	XM_001477596.1	XM_001477596.1		100047184	149254984	XM_001477596.1	LOC100047184	XP_001477646.1	ILMN_2744045	002140192	S	808	GCATATGGCTAGCACCATGGACTATATATACCCACTGACCGATTTTCATT					PREDICTED: Mus musculus similar to proteasome alpha7/C8 subunit (LOC100047184), mRNA.					
Mus musculus	RefSeq	ILMN_211884	ILMN_211884	C920005C14RIK	NM_177391.2	NM_177391.2		338368	31341459	NM_177391.2	C920005C14Rik	NP_796365.1	ILMN_2877835	006060315	S	2384	CAGGAGCCTGAGTTGCAAAGCTGGTGTCTGAGGCTAACAATTGAGTCCAA	15	+	82173141-82173190	15qE1	Mus musculus RIKEN cDNA C920005C14 gene (C920005C14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211513	ILMN_313723	LOC100047214	XM_001477665.1	XM_001477665.1		100047214	149253199	XM_001477665.1	LOC100047214	XP_001477715.1	ILMN_2616573	002320398	S	489	TGACTATCCTGATATGCTGCCCCCACACTACTACCCAGAAGGCCTGGGCC					PREDICTED: Mus musculus similar to PTEN induced putative kinase 1 (LOC100047214), mRNA.					
Mus musculus	RefSeq	ILMN_211513	ILMN_313723	LOC100047214	XM_001477665.1	XM_001477665.1		100047214	149253199	XM_001477665.1	LOC100047214	XP_001477715.1	ILMN_1255556	004880379	S	1515	GGGAAGAACAGCCTTGAACAGCTCAGGAGGGAGAGAGGCACTACCTGTGC					PREDICTED: Mus musculus similar to PTEN induced putative kinase 1 (LOC100047214), mRNA.					
Mus musculus	RefSeq	ILMN_222977	ILMN_222977	PCDHA10	NM_009961.1	NM_009961.1		12943	21426848	NM_009961.1	Pcdha10	NP_034091.1	ILMN_2886128	002680056	S	195	CAGGGTGGCGTCCAAGGACCGCGGGGACCTTCTGGAGGTAAATCTGCAGA	18	+	37165168-37165217	18qB3	Mus musculus protocadherin alpha 10 (Pcdha10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Crnr3; Pcdha14; Crnr8; Cnr8; Cnr3	Crnr3; Pcdha14; Crnr8; Cnr8; Cnr3
Mus musculus	RefSeq	ILMN_222977	ILMN_222977	PCDHA10	NM_009961.1	NM_009961.1		12943	21426848	NM_009961.1	Pcdha10	NP_034091.1	ILMN_2757551	004920452	S	2144	TGGTGTTGTACACTGCCCTGCGATGCTCTGCATTGCCCACTGAGGTCACC	18	+	37167117-37167166	18qB3	Mus musculus protocadherin alpha 10 (Pcdha10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Crnr3; Pcdha14; Crnr8; Cnr8; Cnr3	Crnr3; Pcdha14; Crnr8; Cnr8; Cnr3
Mus musculus	RefSeq	ILMN_252400	ILMN_252400	LOC433886	NM_001007590.2	NM_001007590.2		433886	56118956	NM_001007590.2	LOC433886	NP_001007591.1	ILMN_2939517	003310348	S	494	GAGGCCCTGAGGCTGCAAGTTTACACAGGCTAGTAGTCCCGAAGGTGCCT	5	-	52766337-52766354:52766355-52766386		Mus musculus hypothetical gene supported by AK049058; BC025881 (LOC433886), mRNA.				MGC32324	MGC32324
Mus musculus	RefSeq	ILMN_244517	ILMN_244517	WDR70	NM_001081402.1	NM_001081402.1		545085	124487148	NM_001081402.1	Wdr70	NP_001074871.1	ILMN_3078932	004040538	I	1623	GAGGAAGGCAAAACAAGCTGAGACACTAACCCAGGACTACATCATCACCC	15	-	7835679-7835679:7837329-7837377	15qA1	Mus musculus WD repeat domain 70 (Wdr70), mRNA.				4833422F06Rik	4833422F06Rik
Mus musculus	Riken	ILMN_205711	ILMN_205711	C430020H24RIK	ri|C430020H24|PX00079G07|AK049536|754					AK049536	C430020H24Rik		ILMN_1225604	004850743	S	7	TTTCCGCCATTCCAGCATTCTCAATGTATCTCGGCTGCCTCGTGGTCAGG										
Mus musculus	RefSeq	ILMN_187716	ILMN_243664	VPS35	NM_022997.4	NM_022997.4		65114	146134945	NM_022997.4	Vps35	NP_075373.1	ILMN_1252737	002710632	S	2829	GAGGACAGGAGTACTGTGCGTGAAATTCAGCGTGGGCTTTCCCTGAATGC				8qC3	Mus musculus vacuolar protein sorting 35 (Vps35), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The posttranslational modification of proteins in the vacuole, including proteolytic cleavage of precursors to form active enzymes [goid 6624] [evidence ISA]		AI647796; Mem3	AI647796; Mem3
Mus musculus	RefSeq	ILMN_197131	ILMN_197131	LOC277313	XM_204478.3	XM_204478.3			38074224	XM_204478.3	LOC277313		ILMN_1223525	001170646	S	1730	TTCGTGAGGTAGCAGAGGGCAGGAGGATGGACACTGGGTTCAGCTTTGGG										
Mus musculus	RefSeq	ILMN_201031	ILMN_201031	LOC385583	XM_358296.1	XM_358296.1			38088030	XM_358296.1	LOC385583		ILMN_2540844	000290349	S	345	GGTCAAATGGAGGGGGGTGGTGCTAGCCCAGGTGCCAATCATGAAGGATT										
Mus musculus	RefSeq	ILMN_220670	ILMN_220670	PHKA2	NM_172783.1	NM_172783.1		110094	27370155	NM_172783.1	Phka2	NP_766371.1	ILMN_2725082	003460376	S	3322	AACAGCAGGGCCAGTGGCTGCGCCGGAGAAGGTTGGATGGGGCCATTAAC	X	+	155930957-155931006	XqF4	Mus musculus phosphorylase kinase alpha 2 (Phka2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	Phk; k; D330034O08; 6330505C01Rik	Phk; k; D330034O08; 6330505C01Rik
Mus musculus	RefSeq	ILMN_222383	ILMN_222383	APLNR	NM_011784.2	NM_011784.2		23796	31542120	NM_011784.2	Aplnr	NP_035914.1	ILMN_2748850	007510653	S	3302	TCTCAGGCCAGAAACTTTCACACAGCTACTTTCTCCGCCAGGCCATTCTC	2	+	84979858-84979907	2qD	Mus musculus apelin receptor (Aplnr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	msr/apj; APJ	msr/apj; APJ
Mus musculus	RefSeq	ILMN_250099	ILMN_250099	SETDB2	NM_001081024.1	NM_001081024.1		239122	124486619	NM_001081024.1	Setdb2	NP_001074493.1	ILMN_3042783	001050324	I	2124	CTGCCGCCCCAGAAGATAAGAATGGATTTAAACCAGCTCAAGAACACGTG	14	-	60030952-60031001	14qC3	Mus musculus SET domain, bifurcated 2 (Setdb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Gm293	Gm293
Mus musculus	RefSeq	ILMN_197503	ILMN_250099	SETDB2	NM_001081024.1	NM_001081024.1		239122	124486619	NM_001081024.1	Setdb2	NP_001074493.1	ILMN_1228453	000990615	S	2639	GCAAGGACAGAACTAACGTGGGATTATGGTTATGAAGCTGGGGCCACGCC	14	-	60021193-60021242	14qC3	Mus musculus SET domain, bifurcated 2 (Setdb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Gm293	Gm293
Mus musculus	MEEBO	ILMN_209563	ILMN_209563	4930579K19RIK	scl35469.2.1_45	NM_175227.1			28202008	NM_175227.1	4930579K19Rik		ILMN_2597005	006650136	S	560	AGGCCATAGCGTACCCATGTAACCACAAACCTTGAAGATCTGCGAGTTCA										
Mus musculus	RefSeq	ILMN_222690	ILMN_222690	RDX	NM_009041.2	NM_009041.2		19684	142353663	NM_009041.2	Rdx	NP_033067.1	ILMN_2753452	004050300	S	4155	GGATAATACTGGTTGGTTAACAATAAAGTGACAAAAGCTCCCGCCTTGCA	9	+	51896821-51896841	9qA5.3	Mus musculus radixin (Rdx), mRNA.	A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell [goid 30033] [evidence IMP]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AA516625	AA516625
Mus musculus	RefSeq	ILMN_188112	ILMN_249344	HNRNPA2B1	NM_016806.2	NM_016806.2		53379	109134361	NM_016806.2	Hnrnpa2b1	NP_058086.2	ILMN_2771074	004230706	S	1340	TTAAGGAAACTCTTATCTCAGTCATGCATAAATATGCAGTGGTATGGCAG	6	-	51413129-51413178	6qB3	Mus musculus heterogeneous nuclear ribonucleoprotein A2/B1 (Hnrnpa2b1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hnrpa2; 9130414A06Rik; hnrnp-A	Hnrpa2; 9130414A06Rik; hnrnp-A
Mus musculus	RefSeq	ILMN_194630	ILMN_249344	HNRNPA2B1	NM_016806.2	NM_016806.2		53379	109134361	NM_016806.2	Hnrnpa2b1	NP_058086.2	ILMN_2508137	002350092	S	2092	AAAGCTTTAACTACAGTAGTTGATAAGGATGCCAACGAAAGCTGAGGGTG	6	-	51412377-51412426	6qB3	Mus musculus heterogeneous nuclear ribonucleoprotein A2/B1 (Hnrnpa2b1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hnrpa2; 9130414A06Rik; hnrnp-A	Hnrpa2; 9130414A06Rik; hnrnp-A
Mus musculus	Riken	ILMN_204204	ILMN_204204	9530062N20RIK	ri|9530062N20|PX00113H19|AK035536|2001					AK035536	9530062N20Rik		ILMN_1260267	000150167	S	1726	GTGGAATGAGACAAGGGTGCCCACTCCATTGTTACTCAGTGTAATGCTTC										
Mus musculus	RefSeq	ILMN_198049	ILMN_198049	LOC277922	XM_204247.3	XM_204247.3			38080963	XM_204247.3	LOC277922		ILMN_1258400	001110278	S	100	CCAACAGAACTTGGGAAAAGGATCTTTACCTATCCTAAATCAGATAGGGG										
Mus musculus	Riken	ILMN_207349	ILMN_207349	9530084K20RIK	ri|9530084K20|PX00654G05|AK079289|2698					AK079289	9530084K20Rik		ILMN_1230848	002120441	S	2401	CTTCTCTTCTGTTCATTGTCTAACTGTCACTCCGTAGACGGGTCAGGGCG										
Mus musculus	MEEBO	ILMN_194316	ILMN_194316	5330417P21RIK	scl24000.1.1_150						5330417P21Rik		ILMN_2505334	002810408	S	6	GCACTGAGCACAGCAAAGTTGTTGTAGCTGTTTTAGTATCAGAGGAACAA										
Mus musculus	MEEBO	ILMN_213294	ILMN_213294	HIP2	scl27767.7_34	NM_016786.2			31542955	NM_016786.2	Hip2		ILMN_1258782	000150128	S	452	GGCACCCTAATATTAGTTCCGTCACAGGGGCTATTTGTTTGGATATCCTG										
Mus musculus	MEEBO	ILMN_185097	ILMN_185097	SOX16	scl00116912.1_59						Sox16		ILMN_1236153	005860091	S	6	GAGATCTCGAAGCGCTTGGGCGCTCAGTGGAAGCTGCTGGACGATGAAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210081	ILMN_248617	MTL5	NM_001039657.1	NM_001039657.1		17771	89111948	NM_001039657.1	Mtl5	NP_001034746.1	ILMN_2602024	000020446	S	1618	CAGCTGTGAGGTCTGAGTGATCTGCATGGTACTGGCCAGCCTACTCAAGG	19	+	3407219-3407268	19qA	Mus musculus metallothionein-like 5, testis-specific (tesmin) (Mtl5), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		tesmin	tesmin
Mus musculus	MEEBO	ILMN_223968	ILMN_223968	ANXA4	scl28744.16_312				7304888	NM_013471	Anxa4		ILMN_2772410	006200372	S	1843	GACTGTTTATTTGATCCCCACTGTGCCTTTTTAATCTTATTCAGAAACTG						The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence ISA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191838	ILMN_236985	A730036E13RIK	XM_989657.2	XM_989657.2		320291	149269839	XM_989657.2	A730036E13Rik	XP_994751.1	ILMN_2482662	001980767	S	65	CCAAGGTGTCAACTCTAAACACATTATGGTCAGGCATCATTTCGGCGCTG	18	-	52929195-52929244	18qD1	PREDICTED: Mus musculus RIKEN cDNA A730036E13 gene (A730036E13Rik), mRNA.					
Mus musculus	MEEBO	ILMN_220807	ILMN_220807	ITGAX	scl32007.32.31_71	NM_021334.1			10946645	NM_021334.1	Itgax		ILMN_2727172	005130180	S	3708	TTGGAAGGGCCATTGTCTGGTCAAAACTTTACCTAGAAACTTGGAACACA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199367	ILMN_199367	MRPL51	NM_025595.1	NM_025595.1		66493	13385049	NM_025595.1	Mrpl51	NP_079871.1	ILMN_2831273	002570646	S	1370	TTGGACCAGAGCAAGTGGAGTTGACCAGAGAGAGCAAGGTCAACTGAGGC	6	+	125159866-125159915	6qF3	Mus musculus mitochondrial ribosomal protein L51 (Mrpl51), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IDA]	Mrp64; HSPC241; CDA09; 2610511M02Rik	Mrp64; HSPC241; CDA09; 2610511M02Rik
Mus musculus	RefSeq	ILMN_220048	ILMN_220048	D6WSU176E	NM_138587.4	NM_138587.4		27999	118129980	NM_138587.4	D6Wsu176e	NP_613053.3	ILMN_2728237	004490050	S	1326	TATTTTTGACCTTCCAAAGAAATCCAGAAATAAAATGTTTCACACAAAAA	6	-	22257885-22257934	6qA3.1	Mus musculus DNA segment, Chr 6, Wayne State University 176, expressed (D6Wsu176e), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Fam3c	Fam3c
Mus musculus	RefSeq	ILMN_220048	ILMN_220048	D6WSU176E	NM_138587.4	NM_138587.4		27999	118129980	NM_138587.4	D6Wsu176e	NP_613053.3	ILMN_1229056	000770056	S	2589	GGCCTGGATTCTGTCTTGTACTGGTTACACCGGCTCAACTCGGGAAGCAA	6	-	22256622-22256671	6qA3.1	Mus musculus DNA segment, Chr 6, Wayne State University 176, expressed (D6Wsu176e), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Fam3c	Fam3c
Mus musculus	RefSeq	ILMN_211275	ILMN_211275	UBQLNL	NM_198624.3	NM_198624.3		244179	148539901	NM_198624.3	Ubqlnl	NP_941026.2	ILMN_1220992	004060343	S	2106	TATGTCTTCCCATCTGCTTTCTACTGCATGTTGACACATTTGACCACCTC				7qE3	Mus musculus ubiquilin-like (Ubqlnl), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		Gm490; 4922504M18Rik	Gm490; 4922504M18Rik
Mus musculus	RefSeq	ILMN_221134	ILMN_221134	HPD	NM_008277.2	NM_008277.2		15445	141803320	NM_008277.2	Hpd	NP_032303.1	ILMN_2731444	002360528	S	1263	ACCTCAGGGCTCCACCCACGTCATGGCCACGCCCCCTCTATTACAAGAGT	5	-	123621866-123621915	5qF	Mus musculus 4-hydroxyphenylpyruvic acid dioxygenase (Hpd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6572] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2 [goid 3868] [evidence ISO]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: quercetin + O2 = 2-protocatechuoylphloroglucinolcarboxylate + CO [goid 8127] [evidence IEA]	Hppd	Hppd
Mus musculus	RefSeq	ILMN_222747	ILMN_224516	MASP2	NM_010767.3	NM_010767.3		17175	90962988	NM_010767.3	Masp2	NP_034897.1	ILMN_1216142	002000072	S	679	GGCTGGAATGACTGCCAGCTACAGCACCCATTCACCTTAACCATGACAAT	4|NT_039289.1	+	91455-91504	4qE2	Mus musculus mannan-binding lectin serine peptidase 2 (Masp2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MAp19; MASP-2	MAp19; MASP-2
Mus musculus	RefSeq	ILMN_197801	ILMN_240901	ANKS6	NM_001024136.1	NM_001024136.1		75691	67906180	NM_001024136.1	Anks6	NP_001019307.1	ILMN_2612904	006480181	S	3488	CGAGGGCGTGATTCTTGGAAAGATTTTTCCTTGCCAGACTATATCTATTA	4	-	47028575-47028624	4qB1	Mus musculus ankyrin repeat and sterile alpha motif domain containing 6 (Anks6), mRNA.				2210417J20Rik; Gm635; Ankrd14; Samd6	2210417J20Rik; Gm635; Ankrd14; Samd6
Mus musculus	RefSeq	ILMN_240901	ILMN_240901	ANKS6	NM_001024136.1	NM_001024136.1		75691	67906180	NM_001024136.1	Anks6	NP_001019307.1	ILMN_2906688	003870301	S	3273	AGGGTCCTGTTTCCTGTGTGAACCTTCCCTCTAAGTCCGGCAGACACGGC	4	-	47028790-47028839	4qB1	Mus musculus ankyrin repeat and sterile alpha motif domain containing 6 (Anks6), mRNA.				2210417J20Rik; Gm635; Ankrd14; Samd6	2210417J20Rik; Gm635; Ankrd14; Samd6
Mus musculus	RefSeq	ILMN_215920	ILMN_311511	LOC100041864	XM_001477137.1	XM_001477137.1		100041864	149265509	XM_001477137.1	LOC100041864	XP_001477187.1	ILMN_2665229	000770332	S	483	CAGCATCGCAGACAAGAAGCGCAGAACAGGCTGCATTGGGGCCAAACACA	14	-	49315343-49315392	14qC1	PREDICTED: Mus musculus similar to Rpl11 protein (LOC100041864), mRNA.					
Mus musculus	Riken	ILMN_207124	ILMN_207124	ADAM8	ri|F630003B03|PL00001G11|AK089169|2277					AK089169	Adam8		ILMN_1256561	004560725	S	1648	GAGGATGTACTCTGGCAGCCTGCCTTCTGTCTGCAGGATCAACCGGTGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197330	ILMN_197330	LOC381388	XM_358562.1	XM_358562.1			38075165	XM_358562.1	LOC381388		ILMN_1228309	000460379	S	31	GCCCCTCCGCAATCAGAAGCCAAAGTGAAGGAACTGAAAGTCAAGCAGGT										
Mus musculus	RefSeq	ILMN_200502	ILMN_200502	LOC381744	XM_355730.1	XM_355730.1			38082832	XM_355730.1	LOC381744		ILMN_1232718	007560603	S	63	CCCCAGAGTACATGGAATAAGAAGGCCACAGGACCAGCCCAAGTCCCTTC										
Mus musculus	RefSeq	ILMN_209360	ILMN_209360	NHLRC1	NM_175340.3	NM_175340.3		105193	142366928	NM_175340.3	Nhlrc1	NP_780549.1	ILMN_2595091	001710736	S	2137	GGCAGAAGTGATTTTGTTTGGTGTGGTAAATCTCTGACGCCTGAAGCACT	13	-	47108003-47108052	13qA5	Mus musculus NHL repeat containing 1 (Nhlrc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	AI505271; B230309E09Rik	AI505271; B230309E09Rik
Mus musculus	RefSeq	ILMN_198441	ILMN_198441	LOC381222	XM_355161.1	XM_355161.1			38085149	XM_355161.1	LOC381222		ILMN_1223999	002470093	S	7	CACTACAAAGTGTCTGGAGTGCCTGATCATACCAGTGTCAGTAAGAAGGG										
Mus musculus	RefSeq	ILMN_201429	ILMN_201429	LOC382159	XM_356259.1	XM_356259.1			38093676	XM_356259.1	LOC382159		ILMN_1223912	001500259	S	29	CAGGACTTTCCCCAATTAGGAGGCAGAGGGGAACTTCAGAGCTTCAGCTA										
Mus musculus	RefSeq	ILMN_199632	ILMN_199632	LOC382810	XM_356689.1	XM_356689.1			38075399	XM_356689.1	LOC382810		ILMN_1218040	000730358	S	186	GACTGCTCTGGAAGGCTACTCCACAATCATTGAGGATGATGACAGCCCCG										
Mus musculus	Riken	ILMN_203364	ILMN_203364	9330112I12RIK	ri|9330112I12|PX00104P17|AK033900|1392					AK033900	9330112I12Rik		ILMN_2556741	002340019	S	1064	CTGAGACAATCAACAAGATAGACAAGCCCTTAGCCAGAGGGCACAGAGAC										
Mus musculus	RefSeq	ILMN_199192	ILMN_255312	GAS2L2	NM_001013759.1	NM_001013759.1		237891	62000635	NM_001013759.1	Gas2l2	NP_001013781.1	ILMN_1230724	001780326	S	2556	GCCTCTGAAGCTTGGTGGAACCCCACTTTCACCCGAGGAGGAATCTTGGG	11	-	83235408-83235457	11qC	Mus musculus growth arrest-specific 2 like 2 (Gas2l2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]			
Mus musculus	RefSeq	ILMN_255312	ILMN_255312	GAS2L2	NM_001013759.1	NM_001013759.1		237891	62000635	NM_001013759.1	Gas2l2	NP_001013781.1	ILMN_2913263	004220471	S	1145	CATCACCTGGTCCCCAATTCTCATCTACTTGTAGGGGGCCAGACCTACAG	11	-	83236819-83236868	11qC	Mus musculus growth arrest-specific 2 like 2 (Gas2l2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]			
Mus musculus	RefSeq	ILMN_201102	ILMN_201102	LOC382001	XM_358688.1	XM_358688.1			38089142	XM_358688.1	LOC382001		ILMN_2541084	001090021	S	631	TAAAGGCAGCATCGGAACGCCACGGGGGCCAGAAGTTTGATCTGGGCTGT										
Mus musculus	RefSeq	ILMN_216716	ILMN_216716	ARPP19	NM_021548.4	NM_021548.4		59046	118130434	NM_021548.4	Arpp19	NP_067523.1	ILMN_2674407	000160142	S	3848	CTCCACCATTTGATATGCAATAGGACACTGCCTGTACGCAGAGGGCCAAC	9	+	74907936-74907985	9qD	Mus musculus cAMP-regulated phosphoprotein 19 (Arpp19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ARPP-19; Arpp12; 19kDa; AW559096	ARPP-19; Arpp12; 19kDa; AW559096
Mus musculus	Riken	ILMN_206043	ILMN_206043	D130003C19RIK	ri|D130003C19|PX00182G15|AK051130|2768					AK051130	D130003C19Rik		ILMN_1245586	005260274	S	2577	TTCAGGGCAGCCTTGGACCATGCTTCAGTAGTTGCTAGCGCCTGCCTCTA										
Mus musculus	RefSeq	ILMN_196521	ILMN_250292	4931431F19RIK	XM_907780.2	XM_907780.2		70980	94381147	XM_907780.2	4931431F19Rik	XP_912873.1	ILMN_1249345	002340079	S	1721	CTAGGGGCTCCGCAGGATTAGTCTCTCCATTTGATGCCCACGATTGCACC				7qE3	PREDICTED: Mus musculus RIKEN cDNA 4931431F19 gene (4931431F19Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_196521	ILMN_250292	4931431F19RIK	XM_907780.2	XM_907780.2		70980	94381147	XM_907780.2	4931431F19Rik	XP_912873.1	ILMN_1255459	005570561	S	1445	CGTGGGGCTAGAGGAGCCCAAGAAACTAGGGGTAGAAGACAAGCCCATAG				7qE3	PREDICTED: Mus musculus RIKEN cDNA 4931431F19 gene (4931431F19Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_197067	ILMN_319294	KIF26A	NM_001097621.1	NM_001097621.1		668303	147902442	NM_001097621.1	Kif26a	NP_001091090.1	ILMN_1259342	004070731	S	5798	GTTTGAGGCTGAACACAGGGCGTAGGCAGGACATGCAAGGCAGAGGGTGT				12qF1	Mus musculus kinesin family member 26A (Kif26a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	mKIAA1236; KIAA1236	mKIAA1236; KIAA1236
Mus musculus	RefSeq	ILMN_216987	ILMN_210494	1700055M20RIK	NM_199455.1	NM_199455.1		73407	40804745	NM_199455.1	1700055M20Rik	NP_955534.1	ILMN_1226573	001850373	S	582	GGTCTAAATTCGTGTCCAGGTCCGAAGAGTTCAAGCTGCCTTGTGCCAAC	8	+	97844004-97844053	8qD1	Mus musculus RIKEN cDNA 1700055M20 gene (1700055M20Rik), transcript variant 1, mRNA.				MGC107117; Tepp	MGC107117; Tepp
Mus musculus	RefSeq	ILMN_212378	ILMN_212378	MEST	NM_008590.1	NM_008590.1		17294	6678865	NM_008590.1	Mest	NP_032616.1	ILMN_2642418	003190408	S	2160	AAAGTCCAAGCTGAATAGTAAATAACAGCCTAGGGGCAGCTCCTCCAGGG	6	+	30698074-30698123	6qA3.3	Mus musculus mesoderm specific transcript (Mest), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Peg1; AI256745; AA408879	Peg1; AI256745; AA408879
Mus musculus	RefSeq	ILMN_212378	ILMN_212378	MEST	NM_008590.1	NM_008590.1		17294	6678865	NM_008590.1	Mest	NP_032616.1	ILMN_2642417	001690019	S	2159	GAAAGTCCAAGCTGAATAGTAAATAACAGCCTAGGGGCAGCTCCTCCAGG	6	+	30698073-30698122	6qA3.3	Mus musculus mesoderm specific transcript (Mest), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Peg1; AI256745; AA408879	Peg1; AI256745; AA408879
Mus musculus	RefSeq	ILMN_212378	ILMN_212378	MEST	NM_008590.1	NM_008590.1		17294	6678865	NM_008590.1	Mest	NP_032616.1	ILMN_2846904	006770356	S	2092	GCAGAATTTCCTAAAACTGCCAGGCATTAAGAACTGCATCTGTGCCAGAG	6	+	30698006-30698055	6qA3.3	Mus musculus mesoderm specific transcript (Mest), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Peg1; AI256745; AA408879	Peg1; AI256745; AA408879
Mus musculus	RefSeq	ILMN_242942	ILMN_242942	OLFR627	NM_001025386.1	NM_001025386.1		436002	70794773	NM_001025386.1	Olfr627	NP_001020557.1	ILMN_3163363	002320719	A	292	GTCTGCCTCTTACAGATGTGGCTGATTCACACATTCCAATGTATTGAGTC	7	+	110865401-110865450	7qE3	Mus musculus olfactory receptor 627 (Olfr627), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR22-4; Olfr627-ps1	MOR22-4; Olfr627-ps1
Mus musculus	RefSeq	ILMN_242942	ILMN_242942	OLFR627	NM_001025386.1	NM_001025386.1		436002	70794773	NM_001025386.1	Olfr627	NP_001020557.1	ILMN_3162805	006900014	I	528	TGTTTCCCATTCATACTGTGAGCACATGGCCATTGTGAAGCTGGCAGCAG	7	+	110865637-110865686	7qE3	Mus musculus olfactory receptor 627 (Olfr627), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR22-4; Olfr627-ps1	MOR22-4; Olfr627-ps1
Mus musculus	RefSeq	ILMN_215897	ILMN_215897	MESDC1	NM_030705.4	NM_030705.4		80889	148352326	NM_030705.4	Mesdc1	NP_109630.1	ILMN_2664909	006200209	S	3480	GTCAGTGGAGGGCTTGTTTTTATGACCTTGATTCAAGTGGCTGGTTGGGT				7qD3	Mus musculus mesoderm development candidate 1 (Mesdc1), mRNA.				AW061151	AW061151
Mus musculus	RefSeq	ILMN_213382	ILMN_249493	8030411F24RIK	NM_030135.2	NM_030135.2		78609	142367072	NM_030135.2	8030411F24Rik	NP_084411.1	ILMN_2636508	004200309	S	466	CTGACTAGCACCTGTGTGCCGACATAAGCGCGGGAAGGGGCTTTGGCTAT	2	+	148611537-148611563:148611564-148611586	2qG3	Mus musculus RIKEN cDNA 8030411F24 gene (8030411F24Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	RP23-250M11.3	RP23-250M11.3
Mus musculus	RefSeq	ILMN_185297	ILMN_185297	WNT8B	NM_011720.2	NM_011720.2		22423	142389070	NM_011720.2	Wnt8b	NP_035850.1	ILMN_2425854	006110541	S	1541	GCCATAGCTTCACCTCCCTCCTGTGAGCCAGAGCTTCTAGGCCTAGACTC	19	+	44586929-44586978	19qC3	Mus musculus wingless related MMTV integration site 8b (Wnt8b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]		
Mus musculus	RefSeq	ILMN_219808	ILMN_219808	ELMOD1	NM_177769.4	NM_177769.4		270162	144922692	NM_177769.4	Elmod1	NP_808437.2	ILMN_1216751	000060717	S	1101	GCTCTAAAAACACACTTCTACAACATTGCCCCCGAAGCTCCGACACTGTC	9	-	53767419-53767468	9qA5.3	Mus musculus ELMO domain containing 1 (Elmod1), mRNA. XM_924741	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4831417L10	4831417L10
Mus musculus	Riken	ILMN_206437	ILMN_206437	C230066H16RIK	ri|C230066H16|PX00175J01|AK082585|3985					AK082585	C230066H16Rik		ILMN_1242350	000070762	S	3227	GGCCAGGTGATGACTGCGAGAGCCAAGCCAAGCAGCACCAGCATCATTCT										
Mus musculus	RefSeq	ILMN_199862	ILMN_199862	LOC381525	XM_355485.1	XM_355485.1			38078322	XM_355485.1	LOC381525		ILMN_2536753	000020204	S	132	GATACTTGAGGCGTTTCTGATTAGGGCTGACATTATCTCTCTAATGGGCC										
Mus musculus	RefSeq	ILMN_217384	ILMN_217384	OSBPL2	NM_144500.3	NM_144500.3		228983	141802025	NM_144500.3	Osbpl2	NP_653083.2	ILMN_1259132	006270022	S	2429	GTGCATGTTTCAGTCCAGGCAAGTTACATTCGGTTGTGTGCAATAGAAGG	2	+	179897069-179897118	2qH4	Mus musculus oxysterol binding protein-like 2 (Osbpl2), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]		MGC28451; C130070J12Rik; KIAA0772; mKIAA0772; Orp2; ORP-2	MGC28451; C130070J12Rik; KIAA0772; mKIAA0772; Orp2; ORP-2
Mus musculus	RefSeq	ILMN_189357	ILMN_189357	TLR8	NM_133212.2	NM_133212.2		170744	126723494	NM_133212.2	Tlr8	NP_573475.2	ILMN_2460572	006860482	S	3000	GTAAGAGCTCCATCCTCCAGTGGCCCAACAATCCCAAAGCAGAAAACTTG	X	-	163680772-163680821	XqF5	Mus musculus toll-like receptor 8 (Tlr8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199805	ILMN_199805	LOC383033	XM_356812.1	XM_356812.1			38077519	XM_356812.1	LOC383033		ILMN_1253423	007100563	S	533	CTTCACCAGAAGGTCAGATACGTGCTTACCTCACTTTGGGTGTGGCTGGC										
Mus musculus	RefSeq	ILMN_254706	ILMN_315466	LOC100040899	XM_001475438.1	XM_001475438.1		100040899	149272513	XM_001475438.1	LOC100040899	XP_001475488.1	ILMN_3160454	000380731	S	552	CAACACTCATGTGTTTCCAATGGGGCTTGTGACAACCACTCTGTCGCTCT	X	+	151073420-151073469	XqF3	PREDICTED: Mus musculus similar to Predicted gene, EG434881 (LOC100040899), mRNA.					
Mus musculus	RefSeq	ILMN_201732	ILMN_186201	ZWINT	NM_025635.3	NM_025635.3		52696	141801798	NM_025635.3	Zwint	NP_079911.1	ILMN_1228654	007000112	S	1872	GCAGATCTTCAGGATGGACGTAGTGAGATGCAGCAAACCTGTTCTTTGCC	10	+	72131733-72131782	10qB5.3	Mus musculus ZW10 interactor (Zwint), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		Zwint-1; D10Ertd749e; 2600001N01Rik; 2010007E07Rik	Zwint-1; D10Ertd749e; 2600001N01Rik; 2010007E07Rik
Mus musculus	Riken	ILMN_206132	ILMN_206132	C630015A19RIK	ri|C630015A19|PX00084K05|AK083111|2716					AK083111	C630015A19Rik		ILMN_1227905	000010528	S	2420	GTGTGGTCTGACTACCCAGCTGTGCTCTGGGAGGTGCACTGCTTCACAAA										
Mus musculus	Riken	ILMN_202211	ILMN_202211	1810049N02RIK	ri|1810049N02|ZX00079K11|AK007848|667					AK007848	1810049N02Rik		ILMN_2547852	002320435	S	610	TGAACCACCACATCTCCAGCCCCCAGACCTTAAACATAAAATAAAAAAGT										
Mus musculus	RefSeq	ILMN_217110	ILMN_217110	OLFR1477	NM_146696.2	NM_146696.2		258691	112983619	NM_146696.2	Olfr1477	NP_666907.2	ILMN_2679218	004220523	S	745	TCTTCATGTTGGCAGGATTTGATGTGGCTTTTTCACTATTGGTTATATTG	19	+	13577427-13577476	19qA	Mus musculus olfactory receptor 1477 (Olfr1477), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-10	MOR202-10
Mus musculus	MEEBO	ILMN_193838	ILMN_193838	CHAT	scl000407.1_34				45476574	NM_009891	Chat		ILMN_2500890	003400427	S	6	TGATCTGTTCAGCCTGTCGCCTGCAAATCAGGACGCTCAGCGTGTGCAGC						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The specific actions or reactions of an organism that recur with measured regularity [goid 7622] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The biological process by which a synapse between a motor neuron and a muscle is initially formed [goid 7529] [evidence IMP]; Any process involved in the generation of rhythmic, synchronous excitatory synaptic inputs in a neural circuit [goid 43179] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + choline = CoA + O-acetylcholine [goid 4102] [evidence IMP]		
Mus musculus	MEEBO	ILMN_185622	ILMN_185622	RBM28	scl29215.2.1_62				21536229	NM_026650	Rbm28		ILMN_2428596	004640201	S	20	GTAAGATCGATGTGACTGTTGCCAAGAAAAAACTGAGGAACAAGTCCAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221897	ILMN_210047	SPIRE1	NM_194355.2	NM_194355.2		68166	116686104	NM_194355.2	Spire1	NP_919336.1	ILMN_2741746	003520372	S	4626	GTACTAATGGAGGACTAAACTTGAGGTATGAATGTAGGAGACATGGAAGT	18	-	67648220-67648269	18qE1	Mus musculus spire homolog 1 (Drosophila) (Spire1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles [goid 48193] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU022898; AW550622; Spir-1; AI415299; 6030430B19Rik	AU022898; AW550622; Spir-1; AI415299; 6030430B19Rik
Mus musculus	RefSeq	ILMN_210047	ILMN_210047	SPIRE1	NM_194355.2	NM_194355.2		68166	116686104	NM_194355.2	Spire1	NP_919336.1	ILMN_2767539	001820008	S	82	CCCGGAAGATGAAGACGGAGAGAAGAGAAGCATCTCAGCCATCCGGTCCT	18	-	67712244-67712293	18qE1	Mus musculus spire homolog 1 (Drosophila) (Spire1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles [goid 48193] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU022898; AW550622; Spir-1; AI415299; 6030430B19Rik	AU022898; AW550622; Spir-1; AI415299; 6030430B19Rik
Mus musculus	RefSeq	ILMN_215735	ILMN_215735	XKR8	NM_201368.1	NM_201368.1		381560	41235769	NM_201368.1	Xkr8	NP_958756.1	ILMN_2662990	000770133	S	4118	GCACAGACTGACTCCTCCTTGGTAACGTTCAGCACACTCGACAGCTCTGA	4	-	132280889-132280938	4qD2.3	Mus musculus X Kell blood group precursor related family member 8 homolog (Xkr8), mRNA.				XRG8; RP23-442A20.2; MGC67219; AI597014; Gm1031; 4931440N07Rik	XRG8; RP23-442A20.2; MGC67219; AI597014; Gm1031; 4931440N07Rik
Mus musculus	MEEBO	ILMN_191487	ILMN_191487	AW112037	scl17048.2_461						AW112037		ILMN_1225938	002230504	S	18	GTGGGAGACAGATCTAGGGCCTGGAAGCAGACTTGAAGCGTTTTGAGATC										
Mus musculus	MEEBO	ILMN_187856	ILMN_187856	IBRDC3	scl075234.6_124				51715656	XM_204030	Ibrdc3		ILMN_2447712	003170619	S	6	GGACTTGGCGTCTCAGTAAGAAAGTGTCCTAGAGATGTCCCGGTGCGACT										
Mus musculus	MEEBO	ILMN_211397	ILMN_211397	AI553587	scl0103784.8_117	NM_178909.3			32129216	NM_178909.3	AI553587		ILMN_2615448	002680064	S	1320	CACACACCAGCACCAGCTTTGTTCCTTTTCCCCATGTTTCTACTCAGAAA										
Mus musculus	Riken	ILMN_205509	ILMN_205509	NAGK	ri|D130040K18|PX00184E15|AK051368|1871					AK051368	Nagk		ILMN_1222816	002650408	S	1736	GAGTGACAGAGGCACAGCATCTCCTAAGTCCTGTGTGTAGAAGACTAGCC						That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate [goid 9384] [evidence IDA]; Catalysis of the reaction: ATP + N-acetyl-D-glucosamine = ADP + N-acetyl-D-glucosamine 6-phosphate [goid 45127] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217336	ILMN_217336	MAP2K2	NM_023138.3	NM_023138.3		26396	31581583	NM_023138.3	Map2k2	NP_075627.2	ILMN_1258682	007400253	S	1472	CGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGC	10	+	80586557-80586606	10qC1	Mus musculus mitogen activated protein kinase kinase 2 (Map2k2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MK2; Prkmk2; MEK2; AA589381	MK2; Prkmk2; MEK2; AA589381
Mus musculus	RefSeq	ILMN_217336	ILMN_217336	MAP2K2	NM_023138.3	NM_023138.3		26396	31581583	NM_023138.3	Map2k2	NP_075627.2	ILMN_2884050	004150484	S	1737	GGGGACCCCTCTGGGCTCCAGGGAGCATAGCTAACTCAGCATAGTGCAAA	10	+	80586822-80586871	10qC1	Mus musculus mitogen activated protein kinase kinase 2 (Map2k2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MK2; Prkmk2; MEK2; AA589381	MK2; Prkmk2; MEK2; AA589381
Mus musculus	Riken	ILMN_203939	ILMN_203939	CNP1	ri|A330007H09|PX00131A07|AK039251|1621					AK039251	Cnp1		ILMN_1227020	001300537	S	1468	GGACACGTTCAGCTGTGGTGTACAATGTCTTGGCCATTCCCACCATCTGG										
Mus musculus	RefSeq	ILMN_191458	ILMN_236012	KIRREL	NM_130867.2	NM_130867.2		170643	70608145	NM_130867.2	Kirrel	NP_570937.2	ILMN_2621422	003710615	S	941	CGGAGCCTGTGTCTTGTGAGGTTTATAACAAAGTCGGGAGCACCAATGTC	3	-	86893425-86893474	3qF1	Mus musculus kin of IRRE like (Drosophila) (Kirrel), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Neph1; Kirrel1	Neph1; Kirrel1
Mus musculus	RefSeq	ILMN_217867	ILMN_217867	2810405J04RIK	NM_133747.2	NM_133747.2		72722	139948817	NM_133747.2	2810405J04Rik	NP_598508.2	ILMN_1224651	007570068	S	2645	TTGCTGCAGAAGACAGAAGCCTGGCTGAGTCACTCTCCACGTCTATCCTG	17	-	75936548-75936597	17qE2	Mus musculus RIKEN cDNA 2810405J04 gene (2810405J04Rik), mRNA.				AL024114	AL024114
Mus musculus	RefSeq	ILMN_214169	ILMN_214169	OLFR1061	NM_207134.1	NM_207134.1		259022	46369476	NM_207134.1	Olfr1061	NP_997017.1	ILMN_2645068	006180176	S	876	GAGGAACAAAGATGTAAAAGATGTCCTTAAAAAACCAATGGAAAAAGTGC				2qD	Mus musculus olfactory receptor 1061 (Olfr1061), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR188-7; MOR188-9	MOR188-7; MOR188-9
Mus musculus	RefSeq	ILMN_211321	ILMN_211321	C87436	NM_146170.2	NM_146170.2		232196	30911108	NM_146170.2	C87436	NP_666282.2	ILMN_2882473	004780475	S	2236	AGCCTTGTGTGTACAGTCTTCATACAAGTCGGGCACTTATTTCTGACCAG	6	+	86435748-86435797	6qD1	Mus musculus expressed sequence C87436 (C87436), mRNA.				MGC25529	MGC25529
Mus musculus	RefSeq	ILMN_220557	ILMN_220557	CRYGF	NM_027010.2	NM_027010.2		12969	141802466	NM_027010.2	Crygf	NP_081286.1	ILMN_1256721	006270671	S	553	TTCTATTGAATTTTCTTACTCTGCCCTTTCATCATTTGGAAGTTAATAAA	1	+	65974809-65974817:65974818-65974858	1qC3	Mus musculus crystallin, gamma F (Crygf), mRNA.		The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]	DGcry-2; 3110001K11Rik; Cryg-2; Len-2	DGcry-2; 3110001K11Rik; Cryg-2; Len-2
Mus musculus	RefSeq	ILMN_186897	ILMN_252141	CYP1B1	NM_009994.1	NM_009994.1		13078	6753567	NM_009994.1	Cyp1b1	NP_034124.1	ILMN_1232716	004250246	S	4997	GTGCACACAGATCCTCCGTACACAGAATTAACTAACATGTAGCTTCTACC	17	-	80106374-80106423	17qE3	Mus musculus cytochrome P450, family 1, subfamily b, polypeptide 1 (Cyp1b1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern [goid 18894] [evidence IMP]; The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 9404] [evidence IMP]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	P4501b1; CP1B	P4501b1; CP1B
Mus musculus	RefSeq	ILMN_214175	ILMN_214175	SPPL3	NM_029012.2	NM_029012.2		74585	62530193	NM_029012.2	Sppl3	NP_083288.2	ILMN_1217329	001710725	S	2737	GTTGGTTCCTCTGTCGTCTTCAGACTCTGTTGAGGGGTTTGAAGGGTTGG	5	+	115548719-115548768	5qF	Mus musculus signal peptide peptidase 3 (Sppl3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	MGC90867; Usmg3; Psl4; 4833416I09Rik	MGC90867; Usmg3; Psl4; 4833416I09Rik
Mus musculus	RefSeq	ILMN_191854	ILMN_225115	FAM123A	NM_028113.2	NM_028113.2		72125	142367430	NM_028113.2	Fam123a	NP_082389.1	ILMN_1254220	001710427	S	2529	GCCCCCAGCTTCCAATGCCAGATATGCAAATAGGGAAGGAAAGCTCTATC	14	+	60999711-60999760	14qD1	Mus musculus family with sequence similarity 123, member A (Fam123a), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_188829	ILMN_225115	FAM123A	NM_028113.2	NM_028113.2		72125	142367430	NM_028113.2	Fam123a	NP_082389.1	ILMN_2456075	005960193	S	855	GGATGCGTCCAAGACAGGTGACGTTCCGATAAAGACCGTCCCCCTTGTCG	14	+	60998037-60998086	14qD1	Mus musculus family with sequence similarity 123, member A (Fam123a), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199612	ILMN_199612	LOC382792	XM_356677.1	XM_356677.1			38075080	XM_356677.1	LOC382792		ILMN_2535853	004830068	S	14	CTGGGTACTTAGACATCTCAGCCAACGGCAAGCGCTCGGACCACATCTCC										
Mus musculus	RefSeq	ILMN_191183	ILMN_232490	ZEB1	NM_011546.2	NM_011546.2		21417	118130126	NM_011546.2	Zeb1	NP_035676.1	ILMN_2492500	004290403	S	4934	ACTCTTACACTTTGACACTCACTGTGTGCGACTCATAGCATGCCGCTCTG	18	+	5774625-5774674	18qA1	Mus musculus zinc finger E-box binding homeobox 1 (Zeb1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of smooth muscle cell differentiation [goid 51150] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell differentiation [goid 30857] [evidence IMP]; Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets [goid 10464] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized during embryonic development. Morphogenesis pertains to the creation of form [goid 48596] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IGI]; Any process that modulates the frequency, rate or extent of T cell differentiation in the thymus [goid 33081] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfhx1a; MEB1; ZEB; [delta]EF1; 3110032K11Rik; Zfhep; BZP; Zfx1a; Zfx1ha; AREB6; Tcf8; Tcf18; Nil2	Zfhx1a; MEB1; ZEB; [delta]EF1; 3110032K11Rik; Zfhep; BZP; Zfx1a; Zfx1ha; AREB6; Tcf8; Tcf18; Nil2
Mus musculus	RefSeq	ILMN_186357	ILMN_229332	NOL4	NM_199024.1	NM_199024.1		319211	39841046	NM_199024.1	Nol4	NP_950189.1	ILMN_1254884	006520066	S	1165	TGCAGGCGACAATTCCCTGAGTATCAAGAGCGTGCCAGAAAACGTATCCG	18	-	22928293-22928342	18qA2	Mus musculus nucleolar protein 4 (Nol4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1700013J13Rik; 4930568N03Rik; Gm1262	1700013J13Rik; 4930568N03Rik; Gm1262
Mus musculus	RefSeq	ILMN_229332	ILMN_229332	NOL4	NM_199024.1	NM_199024.1		319211	39841046	NM_199024.1	Nol4	NP_950189.1	ILMN_2918944	002650719	S	2911	TCTAGTGTTAGACACACTCTGAGTGGTATTTTCTGTGCACTGAAGCAGCC	18	-	22852230-22852279	18qA2	Mus musculus nucleolar protein 4 (Nol4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1700013J13Rik; 4930568N03Rik; Gm1262	1700013J13Rik; 4930568N03Rik; Gm1262
Mus musculus	RefSeq	ILMN_186357	ILMN_229332	NOL4	NM_199024.1	NM_199024.1		319211	39841046	NM_199024.1	Nol4	NP_950189.1	ILMN_1260063	005360288	S	3135	CCTTACTCCTTACATCTAGTTTTTCAAGTACTGACTGTGATTGTGACCAG	18	-	22852006-22852055	18qA2	Mus musculus nucleolar protein 4 (Nol4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1700013J13Rik; 4930568N03Rik; Gm1262	1700013J13Rik; 4930568N03Rik; Gm1262
Mus musculus	Riken	ILMN_203714	ILMN_203714	9630036I10RIK	ri|9630036I10|PX00116J23|AK036108|3675					AK036108	9630036I10Rik		ILMN_2559418	004070670	S	3347	ATGCAGGAGTTGCCAGTGTGTAGGCATTTGCAGCAGGAGGCTGGACAGGG										
Mus musculus	RefSeq	ILMN_213956	ILMN_213956	IER2	NM_010499.3	NM_010499.3		15936	141802849	NM_010499.3	Ier2	NP_034629.2	ILMN_2642705	001660538	S	3128	GGACCTCGAAGACACCTTATTACTGAGGGAATGATGGGTGGGTAAAGCTT	8	-	87183570-87183619	8qC3	Mus musculus immediate early response 2 (Ier2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ch1; AI317238; pip92	ch1; AI317238; pip92
Mus musculus	RefSeq	ILMN_214203	ILMN_214203	PVRL2	NM_008990.2	NM_008990.2		19294	31982076	NM_008990.2	Pvrl2	NP_033016.2	ILMN_2996683	004280102	S	2430	GAGACTCTGCTCTTATCCTGAGGACTACTGAATTCTTTTAACCCCTACCC	7	-	20302144-20302193	7qA3	Mus musculus poliovirus receptor-related 2 (Pvrl2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pvr; AI325026; nectin-2; MPH; AI987993; Cd112; Pvs	Pvr; AI325026; nectin-2; MPH; AI987993; Cd112; Pvs
Mus musculus	RefSeq	ILMN_214203	ILMN_214203	PVRL2	NM_008990.2	NM_008990.2		19294	31982076	NM_008990.2	Pvrl2	NP_033016.2	ILMN_2645493	001450020	S	2373	GGTCCAATGCTAGAGGGGAGAACCTAATGCAAGTGTGCCTTGCCACCCCA	7	-	20302201-20302250	7qA3	Mus musculus poliovirus receptor-related 2 (Pvrl2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pvr; AI325026; nectin-2; MPH; AI987993; Cd112; Pvs	Pvr; AI325026; nectin-2; MPH; AI987993; Cd112; Pvs
Mus musculus	RefSeq	ILMN_214203	ILMN_214203	PVRL2	NM_008990.2	NM_008990.2		19294	31982076	NM_008990.2	Pvrl2	NP_033016.2	ILMN_1218242	000150706	S	970	GTGAGGCCATACTGACCTGTGATGTACGAAGCAACCCAGAGCCCACAGAC	7	-	20315974-20316023	7qA3	Mus musculus poliovirus receptor-related 2 (Pvrl2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pvr; AI325026; nectin-2; MPH; AI987993; Cd112; Pvs	Pvr; AI325026; nectin-2; MPH; AI987993; Cd112; Pvs
Mus musculus	MEEBO	ILMN_208895	ILMN_208895	1700108L22RIK	scl0001971.1_69	NM_145988.1			22122438	NM_145988.1	1700108L22Rik		ILMN_2701779	004900370	S	1446	GGATTGAGTAGCATTTCCAAAATTGTTAGGTCCTTTGCTATCTGACTTGC										
Mus musculus	RefSeq	ILMN_222170	ILMN_222170	STARD13	NM_146258.1	NM_146258.1		243362	22122850	NM_146258.1	Stard13	NP_666370.2	ILMN_2745689	004730079	S	5273	CCCCAGCACCTTTCTCTTCCAACTTAGCTGGCTTTCTGATTGTATGCACA	5	-	151840349-151840398	5qG3	Mus musculus StAR-related lipid transfer (START) domain containing 13 (Stard13), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	DLC2; GT650; MGC38133	DLC2; GT650; MGC38133
Mus musculus	RefSeq	ILMN_199124	ILMN_257868	CCNJL	NM_001045530.1	NM_001045530.1		380694	113865890	NM_001045530.1	Ccnjl	NP_001038995.1	ILMN_1235798	004670309	S	1131	CGCAGGACTTGTGCTTGGCATATCGGGACTCGTTGCAGGCCCACCGTTCA	11	+	43398958-43399007	11qB1.1	Mus musculus cyclin J-like (Ccnjl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Gm877	Gm877
Mus musculus	RefSeq	ILMN_223061	ILMN_223061	LY6D	NM_010742.1	NM_010742.1		17068	6754583	NM_010742.1	Ly6d	NP_034872.1	ILMN_2803921	002510646	S	427	TAGTCGTCAGTGTCCCCACGGCCCATGCTTTAGCCATGATGGAGGCACCA	15	-	74592700-74592749	15qD3	Mus musculus lymphocyte antigen 6 complex, locus D (Ly6d), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			Thb; Ly61; Ly-61	Thb; Ly61; Ly-61
Mus musculus	RefSeq	ILMN_223061	ILMN_223061	LY6D	NM_010742.1	NM_010742.1		17068	6754583	NM_010742.1	Ly6d	NP_034872.1	ILMN_2803920	005560754	S	335	ACCCTGGGCCTGGCAACGAGCCTCAGCCTGCTCACTGTTATGGCTCTCTG	15	-	74592792-74592841	15qD3	Mus musculus lymphocyte antigen 6 complex, locus D (Ly6d), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			Thb; Ly61; Ly-61	Thb; Ly61; Ly-61
Mus musculus	MEEBO	ILMN_195941	ILMN_195941	SCL0004010.1_24	scl0004010.1_24	BC038249.1			23398551	BC038249.1	scl0004010.1_24		ILMN_2520149	003060452	S	2	TCCAGGCAGTGAGAGGGTGATTCAGCAAGCCGCTCTCTCTTCTCTTAAGC										
Mus musculus	RefSeq	ILMN_195181	ILMN_195181	YWHAE	NM_009536.3	NM_009536.3		22627	141802428	NM_009536.3	Ywhae	NP_033562.2	ILMN_1220100	004540468	S	1927	GGTGTTGAACAACTAAGTCAGTAATTGTCCTGTCTTTCAAACCAGTTAGC	11	+	75579244-75579293	11qB5	Mus musculus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide (Ywhae), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; Any process the stops, prevents or reduces the frequency, rate or extent of removal of phosphate groups from a protein [goid 35308] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]	AU019196	AU019196
Mus musculus	RefSeq	ILMN_217592	ILMN_217592	MRGPRG	NM_203492.2	NM_203492.2		381974	71896630	NM_203492.2	Mrgprg	NP_987077.1	ILMN_2685203	003170167	S	976	AGAGTCCCAGTCAGGTCTTGGGGGGCTATCCTTGCCCATGCACCAAGTGT	7	-	150950410-150950459	7qF5	Mus musculus MAS-related GPR, member G (Mrgprg), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gm1098; Mrgg	Gm1098; Mrgg
Mus musculus	RefSeq	ILMN_209426	ILMN_209426	OLFR968	NM_146612.1	NM_146612.1		258605	33239221	NM_146612.1	Olfr968	NP_666823.1	ILMN_2595673	004920577	S	453	GGCTTTTGTTGGTGCCACAACTCAAACAGTCTTCATGTTAAAAGTGCATT	9	-	39579881-39579930	9qA5.1	Mus musculus olfactory receptor 968 (Olfr968), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-15	MOR171-15
Mus musculus	RefSeq	ILMN_218824	ILMN_218824	OLFR12	NM_206896.1	NM_206896.1		257890	46047463	NM_206896.1	Olfr12	NP_996779.1	ILMN_2700685	004890204	S	926	GAGGTTAGGACAGAGACACAGCCTTGTGAAGGCAGTGAGAGGCTGCCCTG	1	+	94517410-94517459	1qD	Mus musculus olfactory receptor 12 (Olfr12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR208-5	MOR208-5
Mus musculus	RefSeq	ILMN_209581	ILMN_209581	PON2	NM_183308.2	NM_183308.2		330260	118130746	NM_183308.2	Pon2	NP_899131.1	ILMN_1233836	006380379	S	1726	GAAGTGACTCCTAGGGCATTCGGTTGGACAGGAATCAATGGCCATGTTAA	6	-	5214698-5214747	6qA1	Mus musculus paraoxonase 2 (Pon2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phenyl acetate + H2O = a phenol + acetate [goid 4064] [evidence IEA]; Catalysis of the reaction: aryl dialkyl phosphate + H2O = dialkyl phosphate + an aryl alcohol [goid 4063] [evidence IEA]	MGC68232; AI481612; 6330405I24Rik	MGC68232; AI481612; 6330405I24Rik
Mus musculus	RefSeq	ILMN_197793	ILMN_313904	LOC100046792	XM_001476822.1	XM_001476822.1		100046792	149252232	XM_001476822.1	LOC100046792	XP_001476872.1	ILMN_1251476	007000014	S	676	CAGGGGGAGCTGCTCTCTGTGGCCAAGCAACTGGGAATCATGACAAACTG					PREDICTED: Mus musculus hypothetical protein LOC100046792 (LOC100046792), mRNA.					
Mus musculus	RefSeq	ILMN_197908	ILMN_197908	LOC269624	XM_195528.2	XM_195528.2			38079533	XM_195528.2	LOC269624		ILMN_1246453	007550025	S	707	TCCATAGAGCAGCTTCAACCCTTCCTCAGCAGCCCCATTCCACATCCATG										
Mus musculus	RefSeq	ILMN_196572	ILMN_196572	BRIP1	NM_178309.1	NM_178309.1		237911	30795234	NM_178309.1	Brip1	NP_840094.1	ILMN_2643883	002070242	S	6732	CTGTCCCTGGTTGTACCTCTGACTTGCTATTTATATCACAGTACCATGCC	11	-	85871789-85871838	11qC	Mus musculus BRCA1 interacting protein C-terminal helicase 1 (Brip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	3110009N10Rik; 8030460J03Rik; Bach1; OF	3110009N10Rik; 8030460J03Rik; Bach1; OF
Mus musculus	Riken	ILMN_204556	ILMN_204556	EDIL3	ri|B930001A02|PX00162N04|AK046885|2722					AK046885	Edil3		ILMN_1259411	006250707	S	2436	GCACACCATAATGGTTAGAGCATTAAACTCCACTGCAAACCCTCTGGGCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215433	ILMN_215433	CXCL14	NM_019568.2	NM_019568.2		57266	119392097	NM_019568.2	Cxcl14	NP_062514.2	ILMN_2760800	000150746	S	1591	CACTGTTCTCTGAGTTAGGATGTTAGGACGATCCTGCGCCCTGCCCTCTC	13	-	56390190-56390239	13qB1	Mus musculus chemokine (C-X-C motif) ligand 14 (Cxcl14), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	KS1; 1200006I23Rik; Kec; bolekine; NJAC; MIP-2g; MGC90667; Scyb14; MIP2gamma; BRAK; AI414372; BMAC; 1110031L23Rik	KS1; 1200006I23Rik; Kec; bolekine; NJAC; MIP-2g; MGC90667; Scyb14; MIP2gamma; BRAK; AI414372; BMAC; 1110031L23Rik
Mus musculus	RefSeq	ILMN_215429	ILMN_215429	FOLR4	NM_176807.3	NM_176807.3		64931	141803239	NM_176807.3	Folr4	NP_789777.1	ILMN_2659388	005960746	S	787	TAGGCTGGAACAGGCTGAGACAGAGTTGAGCCTCCTGTTATCTGGCCCTA	9	-	14690593-14690642	9qA2	Mus musculus folate receptor 4 (delta) (Folr4), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence TAS]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	0910001L11Rik; Folbp3; C86255	0910001L11Rik; Folbp3; C86255
Mus musculus	RefSeq	ILMN_215429	ILMN_215429	FOLR4	NM_176807.3	NM_176807.3		64931	141803239	NM_176807.3	Folr4	NP_789777.1	ILMN_1241648	004070341	S	799	GGCTGAGACAGAGTTGAGCCTCCTGTTATCTGGCCCTACCAGAGCTAGGA	9	-	14690581-14690630	9qA2	Mus musculus folate receptor 4 (delta) (Folr4), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence TAS]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	0910001L11Rik; Folbp3; C86255	0910001L11Rik; Folbp3; C86255
Mus musculus	RefSeq	ILMN_216815	ILMN_311616	LOC100046068	XM_001474312.1	XM_001474312.1		100046068	149271910	XM_001474312.1	LOC100046068	XP_001474362.1	ILMN_2675677	002490372	S	3185	GGAGAGGTCCTGTGCTGCTAACCCCTTCTCTTCAATAGTTTCAGCAAGTG					PREDICTED: Mus musculus similar to Paraneoplastic antigen MA3 (LOC100046068), mRNA.					
Mus musculus	RefSeq	ILMN_201557	ILMN_260714	WDR89	XM_001001795.2	XM_001001795.2		72338	149263162	XM_001001795.2	Wdr89	XP_001001795.1	ILMN_1213072	002000612	S	2077	GGTTAGCCAGCACCCAGGTACTTTGCTGATGAAAAAAGAAATTACCTTAC				12qC3	PREDICTED: Mus musculus WD repeat domain 89, transcript variant 1 (Wdr89), mRNA.					
Mus musculus	RefSeq	ILMN_213654	ILMN_260714	WDR89	XM_001001795.2	XM_001001795.2		72338	149263162	XM_001001795.2	Wdr89	XP_001001795.1	ILMN_2639350	003130170	S	2048	GGAGCTATATTTATACTATATTTACATTTGGTTAGCCAGCACCCAGGTAC				12qC3	PREDICTED: Mus musculus WD repeat domain 89, transcript variant 1 (Wdr89), mRNA.					
Mus musculus	RefSeq	ILMN_200893	ILMN_200893	LOC384636	XM_357758.1	XM_357758.1			38086883	XM_357758.1	LOC384636		ILMN_2540372	006380575	S	396	GTGGGGCTGCTTCCTGTGTGCATTTGTCAAGGTGTCTGTGGCTTTAGTTC										
Mus musculus	RefSeq	ILMN_222980	ILMN_222980	LTBR	NM_010736.3	NM_010736.3		17000	145301633	NM_010736.3	Ltbr	NP_034866.1	ILMN_2757582	007610593	S	1768	TAAACATGGCAGAGGAGGGAGCTGGTCCCAGGGTCACTCGCAAGGATATC				6qF3	Mus musculus lymphotoxin B receptor (Ltbr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tnfrsf3; TNF-R-III; AI256028; Tnfbr; TNFR-RP; Ltar; TNFCR; TNFRrp; TNFR2-RP; CD18; LTbetaR	Tnfrsf3; TNF-R-III; AI256028; Tnfbr; TNFR-RP; Ltar; TNFCR; TNFRrp; TNFR2-RP; CD18; LTbetaR
Mus musculus	RefSeq	ILMN_215202	ILMN_215202	NHLH1	NM_010916.1	NM_010916.1		18071	6754851	NM_010916.1	Nhlh1	NP_035046.1	ILMN_2656711	006020736	S	2389	TCTGGTTGCATTCCTAATTTCCTACAAAAAGAAAAATTAAAGTGACCTCG	1	-	173982435-173982484	1qH3	Mus musculus nescient helix loop helix 1 (Nhlh1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Hen1; Tal2; Nscl	Hen1; Tal2; Nscl
Mus musculus	RefSeq	ILMN_219944	ILMN_219944	DNER	NM_152915.1	NM_152915.1		227325	23097345	NM_152915.1	Dner	NP_690879.1	ILMN_1243949	000290142	S	3447	TGCAGGTGTTTCTTGCTAAGAGGTAGTGACATGTAAGAGGTGCCAGTCCC	1	-	84366549-84366598	1qC5	Mus musculus delta/notch-like EGF-related receptor (Dner), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Bret; A930026D19Rik; MGC39059; BET	Bret; A930026D19Rik; MGC39059; BET
Mus musculus	RefSeq	ILMN_221378	ILMN_221378	RORA	NM_013646.1	NM_013646.1		19883	7305438	NM_013646.1	Rora	NP_038674.1	ILMN_1243741	003190240	S	1562	GCAAATCGATGGGTAAATGTCGCGCCCGAGCACTTCTAGAACATCTGGAG	9	+	69212115-69212164	9qC	Mus musculus RAR-related orphan receptor alpha (Rora), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate [goid 46068] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; Any process that modulates the frequency or rate of macrophage activation [goid 43030] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nr1f1; nmf267; ROR2; staggerer; sg; ROR1; ROR3; 9530021D13Rik	Nr1f1; nmf267; ROR2; staggerer; sg; ROR1; ROR3; 9530021D13Rik
Mus musculus	RefSeq	ILMN_221378	ILMN_221378	RORA	NM_013646.1	NM_013646.1		19883	7305438	NM_013646.1	Rora	NP_038674.1	ILMN_2742686	006250477	S	81	TCCAGGGAGACCCCGCTGACCCAGGACACGGGCCGCAAGAGCGAGGCACC	9	+	68501689-68501738	9qC	Mus musculus RAR-related orphan receptor alpha (Rora), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate [goid 46068] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; Any process that modulates the frequency or rate of macrophage activation [goid 43030] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nr1f1; nmf267; ROR2; staggerer; sg; ROR1; ROR3; 9530021D13Rik	Nr1f1; nmf267; ROR2; staggerer; sg; ROR1; ROR3; 9530021D13Rik
Mus musculus	RefSeq	ILMN_191417	ILMN_248252	DERA	NM_172733.1	NM_172733.1		232449	27777676	NM_172733.1	Dera	NP_766321.1	ILMN_1227366	004670301	S	1456	CATTCGTGTCCCCTACCTCTGACACATAATAAATACACTTAAAACTGTGA	6	+	137786161-137786210	6qG1	Mus musculus 2-deoxyribose-5-phosphate aldolase homolog (C. elegans) (Dera), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9264] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde [goid 4139] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	DEOC; 2500002K03Rik; 2010002D22Rik	DEOC; 2500002K03Rik; 2010002D22Rik
Mus musculus	RefSeq	ILMN_188718	ILMN_249690	1700069B07RIK	XM_914089.3	XM_914089.3		76613	149274435	XM_914089.3	1700069B07Rik	XP_919182.3	ILMN_1237380	000160687	S	669	CGAGGGACTGCCGCGTACCCACCCGAACGTGGTCACGGAGCTGGCACATT					PREDICTED: Mus musculus RIKEN cDNA 1700069B07 gene (1700069B07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201364	ILMN_258223	TRIM58	XM_994772.1	XM_994772.1		216781	94390370	XM_994772.1	Trim58	XP_999866.1	ILMN_2542037	002940131	S	1253	CTCAGTGCCTGTGCTCCAAGATGAGCGACCTCGCCGCATCGGGATCTTTT				11qB1.3	PREDICTED: Mus musculus tripartite motif-containing 58 (Trim58), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200603	ILMN_200603	LOC381773	XM_355770.1	XM_355770.1			38084223	XM_355770.1	LOC381773		ILMN_1259251	005690278	S	513	TTCTGCAGAATCACAGTGCTAAGCTAGCATTCGAAGGGCACACGGAGAGA										
Mus musculus	RefSeq	ILMN_212646	ILMN_212646	PPP1R12C	NM_029834.3	NM_029834.3		232807	142384961	NM_029834.3	Ppp1r12c	NP_084110.2	ILMN_1236118	006270093	S	713	CATGACACAAGGTGCTGGCTGAATGGGGGTGCTATGCCAGAGGCCAGGCA	7	-	4441397-4441446	7qA1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 12C (Ppp1r12c), mRNA. XM_976362 XM_976397 XM_976435 XM_976476	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			B430101M08; AI839747; 2410197A17Rik; Mbs85	B430101M08; AI839747; 2410197A17Rik; Mbs85
Mus musculus	RefSeq	ILMN_212646	ILMN_212646	PPP1R12C	NM_029834.3	NM_029834.3		232807	142384961	NM_029834.3	Ppp1r12c	NP_084110.2	ILMN_2628828	000830278	S	567	CCAACATTGCTGCTGTCAACAGTGACGGGGACCTGCCTTTGGACCTGGCT	7	-	4448867-4448916	7qA1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 12C (Ppp1r12c), mRNA. XM_976362 XM_976397 XM_976435 XM_976476	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			B430101M08; AI839747; 2410197A17Rik; Mbs85	B430101M08; AI839747; 2410197A17Rik; Mbs85
Mus musculus	Riken	ILMN_204131	ILMN_204131	B130034H21RIK	ri|B130034H21|PX00158O15|AK045115|2661					AK045115	B130034H21Rik		ILMN_1251591	001340482	S	2294	CAGTCATTGGGGTGAAAGCTAGAGGGTTAGGAGTCTGAGACCAGCTGGGC										
Mus musculus	RefSeq	ILMN_202234	ILMN_225698	PDXDC1	NM_001039533.1	NM_001039533.1		94184	88758583	NM_001039533.1	Pdxdc1	NP_001034622.1	ILMN_1241643	003120020	S	2850	CACAGTGCCCAAGACAGACAGCTCATACCTGCCATCAAACACTCAGGAGG	16	-	13834347-13834396	16qA1	Mus musculus pyridoxal-dependent decarboxylase domain containing 1 (Pdxdc1), transcript variant 3, mRNA.		The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	2210010A19Rik; AA415817; MGC8182; Kiaa0251-hp	2210010A19Rik; AA415817; MGC8182; Kiaa0251-hp
Mus musculus	RefSeq	ILMN_205424	ILMN_225698	PDXDC1	NM_001039533.1	NM_001039533.1		94184	88758583	NM_001039533.1	Pdxdc1	NP_001034622.1	ILMN_1249297	004810470	S	2854	GTGCCCAAGACAGACAGCTCATACCTGCCATCAAACACTCAGGAGGCTGA	16	-	13834343-13834392	16qA1	Mus musculus pyridoxal-dependent decarboxylase domain containing 1 (Pdxdc1), transcript variant 3, mRNA.		The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	2210010A19Rik; AA415817; MGC8182; Kiaa0251-hp	2210010A19Rik; AA415817; MGC8182; Kiaa0251-hp
Mus musculus	RefSeq	ILMN_225698	ILMN_225698	PDXDC1	NM_001039533.1	NM_001039533.1		94184	88758583	NM_001039533.1	Pdxdc1	NP_001034622.1	ILMN_3105205	004480682	A	1941	GATGATGTGGACGTTTCTGAGCTAGTGGAGACCATTGCAGTCACAGCCCG	16	-	13839346-13839395	16qA1	Mus musculus pyridoxal-dependent decarboxylase domain containing 1 (Pdxdc1), transcript variant 3, mRNA.		The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	2210010A19Rik; AA415817; MGC8182; Kiaa0251-hp	2210010A19Rik; AA415817; MGC8182; Kiaa0251-hp
Mus musculus	RefSeq	ILMN_212969	ILMN_212969	EPS8L2	NM_133191.2	NM_133191.2		98845	21040232	NM_133191.2	Eps8l2	NP_573454.2	ILMN_2821263	004180132	S	2809	ACAGGAGGCCTTGGGTGACCTGCTGGTATAGAGTATGCTGTATTCTTTCT	7	+	148548659-148548708	7qF5	Mus musculus EPS8-like 2 (Eps8l2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISO]	A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]	AI042819; AW545405; Eps8r2	AI042819; AW545405; Eps8r2
Mus musculus	RefSeq	ILMN_212969	ILMN_212969	EPS8L2	NM_133191.2	NM_133191.2		98845	21040232	NM_133191.2	Eps8l2	NP_573454.2	ILMN_1223406	003140390	S	2405	CCTAGCTACACCTGTGGGTAGCTCTTTTACCACCCGAGCCCTACCCCCAA	7	+	148548255-148548304	7qF5	Mus musculus EPS8-like 2 (Eps8l2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISO]	A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]	AI042819; AW545405; Eps8r2	AI042819; AW545405; Eps8r2
Mus musculus	RefSeq	ILMN_220981	ILMN_220981	ROR2	NM_013846.3	NM_013846.3		26564	47271532	NM_013846.3	Ror2	NP_038874.3	ILMN_2729422	006130743	S	3603	AAGGCCAGCAGGAGCTCGATGCTGCCATCTGCTGGAGTCCAAAGGACAGA	13	-	53205003-53205052	13qB1	Mus musculus receptor tyrosine kinase-like orphan receptor 2 (Ror2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 30538] [evidence IMP]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IPI]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence TAS]	Ntrkr2; mRor2	Ntrkr2; mRor2
Mus musculus	RefSeq	ILMN_196916	ILMN_196916	LOC227265	XM_149025.3	XM_149025.3			38049562	XM_149025.3	LOC227265		ILMN_1216537	004780494	S	611	CAACGCAACTGGCCTTTTCCCATTGGCTCTGGGGATGGACTCAGATCCTC										
Mus musculus	RefSeq	ILMN_199348	ILMN_199348	GM77	XM_359331.5	XM_359331.5		219038	149266176	XM_359331.5	Gm77	XP_359331.1	ILMN_1258091	006280435	S	20	GAACATTCCATCGATTCGCTGTCTTTGGAGAATCATCCAGCAGCGGCAAG	14	+	52531760-52531809	14qC2	PREDICTED: Mus musculus gene model 77, (NCBI) (Gm77), mRNA.					
Mus musculus	MEEBO	ILMN_185967	ILMN_185967	ZFP264	scl0116812.7_9				51763513	XM_486050	Zfp264		ILMN_2431509	006840504	S	20	GGGGAGGTTTCGTTAGACACTTTGTCATCCATGGTAGAGAGAACCCATAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_185967	ILMN_185967	ZFP264	scl0116812.7_9				51763513	XM_486050	Zfp264		ILMN_2476174	006550494	S	5	TGGACAAGTCTTTTGACATTGGGGAGGTTTCGTTAGACACTTTGTCATCC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_236581	ILMN_236581	SORCS3	NM_025696.3	NM_025696.3		66673	118130290	NM_025696.3	Sorcs3	NP_079972.1	ILMN_3101483	006040722	A	3515	CAGCTCTGCCATGCTTATGCTCCTCTCGGTGGTATTCGTCGGCTTGGCTG	19	+	48871931-48871980	19qD1	Mus musculus sortilin-related VPS10 domain containing receptor 3 (Sorcs3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW045579; 6330404A12Rik	AW045579; 6330404A12Rik
Mus musculus	RefSeq	ILMN_185973	ILMN_236581	SORCS3	NM_025696.3	NM_025696.3		66673	118130290	NM_025696.3	Sorcs3	NP_079972.1	ILMN_1228549	003830521	S	5184	CCATGCTGCGAGCATCGTTTTCATTTTTGGGCTCTGCCTGTGCACACTTG	19	+	48879545-48879594	19qD1	Mus musculus sortilin-related VPS10 domain containing receptor 3 (Sorcs3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW045579; 6330404A12Rik	AW045579; 6330404A12Rik
Mus musculus	RefSeq	ILMN_220611	ILMN_220611	1700019E19RIK	NM_029601.1	NM_029601.1		76411	21313191	NM_029601.1	1700019E19Rik	NP_083877.1	ILMN_1236344	000990164	S	591	GGGACCATCTAGGTACATCTGACCCAGGAGCATCACTGAGCATTTGAACA	12	+	87503226-87503247:87503248-87503275	12qD2	Mus musculus RIKEN cDNA 1700019E19 gene (1700019E19Rik), mRNA.				R75064	R75064
Mus musculus	RefSeq	ILMN_245336	ILMN_245336	PABPC4L	NR_002862.1	NR_002862.1		328451	84872154	NR_002862.1	Pabpc4l		ILMN_2919402	005220703	S	2100	TTACAGTTACAGCAGCCCGGGAAGGGGGAAACCAAATCTTTGCGGGTGCC	14	+	88746156-88746205	14qE2.1	Mus musculus poly(A)-binding protein, cytoplasmic pseudogene (Pabpc4l) on chromosome 14.					
Mus musculus	RefSeq	ILMN_195302	ILMN_195302	CRLF2	NM_016715.3	NM_016715.3		57914	141802359	NM_016715.3	Crlf2	NP_057924.2	ILMN_2514362	001440626	S	340	AGCTGGCACTGCGCGACGGAGGCGGGGCCATGGTGTTTAAGGCTAGGCAG	5	-	109986035-109986084	5qF	Mus musculus cytokine receptor-like factor 2 (Crlf2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	CRLM2; Ly114; Tslpr	CRLM2; Ly114; Tslpr
Mus musculus	RefSeq	ILMN_213801	ILMN_315527	4930509E16RIK	XM_001475016.1	XM_001475016.1		75115	149260019	XM_001475016.1	4930509E16Rik	XP_001475066.1	ILMN_2640937	002260196	S	784	ACTTTGTCAGTGATTGCTAGTTAGTGTTAGAGATGGAGAAAGTGGCTAGA	9	-	72366514-72366563	9qD	PREDICTED: Mus musculus RIKEN cDNA 4930509E16 gene (4930509E16Rik), mRNA.					
Mus musculus	Riken	ILMN_202330	ILMN_202330	SIAT8C	ri|4930523A17|PX00033G20|AK015874|1791					AK015874	Siat8c		ILMN_1221723	006290681	S	656	ACACTCACACGCGCCCGCGAGCACACACGCACGCACACAACACACTCACA										
Mus musculus	RefSeq	ILMN_190430	ILMN_226732	2310044G17RIK	NM_173735.2	NM_173735.2		217732	31343461	NM_173735.2	2310044G17Rik	NP_776096.1	ILMN_2689138	006270743	S	2380	GTTGTCTCTTGTCTGTGCCTCTCCCAGTTGTTTCTGTGAGGGAAAAATGA	12	+	88304662-88304711	12qD2	Mus musculus RIKEN cDNA 2310044G17 gene (2310044G17Rik), mRNA.				AI842544; AI853744; mKIAA1737	AI842544; AI853744; mKIAA1737
Mus musculus	Riken	ILMN_201855	ILMN_201855	6330416L11RIK	ri|6330416L11|PX00008B23|AK018183|1393					AK018183	6330416L11Rik		ILMN_1212934	007210100	S	1047	AGCACTTGCTGCTCTCACAGAAGACTGTCCAGTGCCCAACAGCTGCCGGT										
Mus musculus	MEEBO	ILMN_193386	ILMN_193386	6330419D11RIK	scl0070764.1_135						6330419D11Rik		ILMN_2496673	000510689	S	6	AAGGGAGAGCCCTCCACCTGAGGACCCAATATGTCTTTACACATAGAAGC										
Mus musculus	Riken	ILMN_206302	ILMN_206302	C230011J16RIK	ri|C230011J16|PX00173E04|AK082130|3810					AK082130	C230011J16Rik		ILMN_2579108	000630019	S	3646	TGAGCATCAGATCAAAGACCCGAAGGTGAGAAGGACAGGAGACTAACAAG										
Mus musculus	Riken	ILMN_205326	ILMN_205326	A130089I23RIK	ri|A130089I23|PX00126M07|AK038241|1895					AK038241	A130089I23Rik		ILMN_1237365	005050091	S	1708	TGTCTCACCACAGAGACCTGGGAACTGGGGCGTGCTGTTCTTGAATGGGC										
Mus musculus	RefSeq	ILMN_215894	ILMN_215894	JSRP1	NM_028001.2	NM_028001.2		71912	142363261	NM_028001.2	Jsrp1	NP_082277.1	ILMN_2664858	005960228	S	1061	ATAAGTCACAGGTCACTGGGGAGCCCCGTCAATCACTGCCACGGCGCTGG	10	-	80271460-80271509	10qC1	Mus musculus junctional sarcoplasmic reticulum protein 1 (Jsrp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	JP-45; 2310032K21Rik; 2300003C06Rik	JP-45; 2310032K21Rik; 2300003C06Rik
Mus musculus	RefSeq	ILMN_209737	ILMN_209737	PKD1L2	NM_029686.1	NM_029686.1		76645	31541841	NM_029686.1	Pkd1l2	NP_083962.1	ILMN_2911627	000650753	S	6943	GGCTTTGTCGCCGTCATTCTTATCATGCTCCTGGCGTATTCCTTTGCGTC	8	-	119522076-119522077:119523673-119523720	8qE1	Mus musculus polycystic kidney disease 1 like 2 (Pkd1l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Interacting selectively with a G-protein alpha subunit. The alpha subunit binds a guanine nucleotide [goid 1965] [evidence ISO]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	1700126L06Rik	1700126L06Rik
Mus musculus	RefSeq	ILMN_209737	ILMN_209737	PKD1L2	NM_029686.1	NM_029686.1		76645	31541841	NM_029686.1	Pkd1l2	NP_083962.1	ILMN_2598742	002030630	S	5486	CCAGCGGGGTGGCGGCCTTCTTCACGATGCTGTACGGCCTGCACTATGGA	8	-	119545796-119545845	8qE1	Mus musculus polycystic kidney disease 1 like 2 (Pkd1l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Interacting selectively with a G-protein alpha subunit. The alpha subunit binds a guanine nucleotide [goid 1965] [evidence ISO]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	1700126L06Rik	1700126L06Rik
Mus musculus	RefSeq	ILMN_209737	ILMN_209737	PKD1L2	NM_029686.1	NM_029686.1		76645	31541841	NM_029686.1	Pkd1l2	NP_083962.1	ILMN_2692151	006400402	S	7272	CAGCTTTCTGGGCATCAGATGTAAAAGGGAGGAGACTTGGAGCAGCAGTG	8	-	119519644-119519693	8qE1	Mus musculus polycystic kidney disease 1 like 2 (Pkd1l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Interacting selectively with a G-protein alpha subunit. The alpha subunit binds a guanine nucleotide [goid 1965] [evidence ISO]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	1700126L06Rik	1700126L06Rik
Mus musculus	MEEBO	ILMN_192383	ILMN_192383	FNBP3	scl4489.1.1_30				9055217	NM_018785	Fnbp3		ILMN_1250117	003870358	S	18	CAAGATTGCTAATGAGTCCCAGTACTTGACACGGAGGTCAGAGATAGTCT										
Mus musculus	RefSeq	ILMN_200631	ILMN_200631	LOC384427	XM_357643.1	XM_357643.1			38084574	XM_357643.1	LOC384427		ILMN_1252945	006250338	S	21	GGATCCTCTAGAGTCGACCAGGCTCCAGCTTAACGATATTTGGAGAGCAC										
Mus musculus	RefSeq	ILMN_210920	ILMN_311525	4930524L23RIK	XM_001473669.1	XM_001473669.1		78185	149270889	XM_001473669.1	4930524L23Rik	XP_001473719.1	ILMN_2610591	006980259	S	600	GGAATGTAGAAAATTCTAGTTAAATGTTGGCTACCAAAATTATGACAGCT				XqA1.1	PREDICTED: Mus musculus RIKEN cDNA 4930524L23 gene (4930524L23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213766	ILMN_234881	PIR	NM_027153.2	NM_027153.2		69656	118130337	NM_027153.2	Pir	NP_081429.1	ILMN_2640551	006510634	S	1087	CAGAAATGCAAAAAATGGTTTTGAGGGGGCCAGAACCTGGAAGTCAAAGA	X	+	160810437-160810486	XqF5	Mus musculus pirin (Pir), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2310042L19Rik	2310042L19Rik
Mus musculus	RefSeq	ILMN_202046	ILMN_315865	LOC100048696	XM_001480864.1	XM_001480864.1		100048696	149249725	XM_001480864.1	LOC100048696	XP_001480914.1	ILMN_1231682	002360168	S	715	GCCACCGTTAACTGCGCGACAAAGAAAGGAACCCAGGACTGGCGGTTTTC					PREDICTED: Mus musculus hypothetical protein LOC100048696 (LOC100048696), mRNA.					
Mus musculus	Riken	ILMN_201949	ILMN_201949	4930518F22RIK	ri|4930518F22|PX00033B16|AK015825|1279					AK015825	4930518F22Rik		ILMN_1253033	002000195	S	1103	AAAAAAATTTCCAGCATAGGGCGGGGGACAGGGCAGAGGTCGTCCACTCC										
Mus musculus	RefSeq	ILMN_217347	ILMN_318023	LOC100044179	XM_001471690.1	XM_001471690.1		100044179	149266992	XM_001471690.1	LOC100044179	XP_001471740.1	ILMN_2682168	005900438	S	1783	CCCAAAGCCTGATCTACTTGTTTTCCTCGGTCCCTGCTGACTTGGACGCA					PREDICTED: Mus musculus hypothetical protein LOC100044179, transcript variant 2 (LOC100044179), mRNA.					
Mus musculus	Riken	ILMN_201940	ILMN_201940	ERN1	ri|9030414B18|PX00025I24|AK018505|1958					AK018505	Ern1		ILMN_1247556	006220131	S	1602	TTCCTGGCTTGCATGGGCAGCAAAGGGGACTTGGAGGTTTCTGAAGGCCT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]	Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks [goid 4521] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16891] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214309	ILMN_239508	SLC12A6	NM_133648.1	NM_133648.1		107723	19526768	NM_133648.1	Slc12a6	NP_598409.1	ILMN_2716511	004070278	S	5484	TTTGAATTGCAGGGCCTGGTTGACAGGTGCCAGCTTCCTCGTGGCAGAGC	2	+	112202848-112202897	2qE3	Mus musculus solute carrier family 12, member 6 (Slc12a6), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KCC3	KCC3
Mus musculus	RefSeq	ILMN_215453	ILMN_215453	IL7R	NM_008372.3	NM_008372.3		16197	45269151	NM_008372.3	Il7r	NP_032398.3	ILMN_2975500	001780079	S	2981	ACTCTTGGTCAGAGACAATATGCAAAACAGAGATGTCAAGTACTATGTCC	15	-	9436075-9436124	15qA1	Mus musculus interleukin 7 receptor (Il7r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IGI]; Any process that stops, prevents, or reduces the rate of T cell mediated cytotoxicity [goid 1915] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation in the thymus [goid 33089] [evidence IMP]; Any process that modulates the size of a cell [goid 8361] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IGI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IGI]; The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 2377] [evidence IGI]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	IL-7Ralpha; CD127; MGC107557	IL-7Ralpha; CD127; MGC107557
Mus musculus	RefSeq	ILMN_215453	ILMN_215453	IL7R	NM_008372.3	NM_008372.3		16197	45269151	NM_008372.3	Il7r	NP_032398.3	ILMN_2680827	001660504	S	2907	GGGACTGCATGCAATGTAACATTACTGGTTGGTTCTGCCAATTTTCCTCT	15	-	9436149-9436198	15qA1	Mus musculus interleukin 7 receptor (Il7r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IGI]; Any process that stops, prevents, or reduces the rate of T cell mediated cytotoxicity [goid 1915] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation in the thymus [goid 33089] [evidence IMP]; Any process that modulates the size of a cell [goid 8361] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IGI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IGI]; The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 2377] [evidence IGI]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	IL-7Ralpha; CD127; MGC107557	IL-7Ralpha; CD127; MGC107557
Mus musculus	RefSeq	ILMN_215453	ILMN_215453	IL7R	NM_008372.3	NM_008372.3		16197	45269151	NM_008372.3	Il7r	NP_032398.3	ILMN_2659739	000610022	S	1263	CTTTCCTCTAGGTCCCCTGACTACAGAGATGGTGACAGAAATAGGCCTCC	15	-	9437793-9437842	15qA1	Mus musculus interleukin 7 receptor (Il7r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IGI]; Any process that stops, prevents, or reduces the rate of T cell mediated cytotoxicity [goid 1915] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation in the thymus [goid 33089] [evidence IMP]; Any process that modulates the size of a cell [goid 8361] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IGI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IGI]; The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 2377] [evidence IGI]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	IL-7Ralpha; CD127; MGC107557	IL-7Ralpha; CD127; MGC107557
Mus musculus	RefSeq	ILMN_222089	ILMN_222089	FTH1	NM_010239.1	NM_010239.1		14319	6753911	NM_010239.1	Fth1	NP_034369.1	ILMN_2876066	007570382	S	692	CCTGGGACACGGTGATGAGAGCTAAGCTGACTTCCCCAAAGCCACGTGAC	19	+	10059408-10059432:10059433-10059457	19qA	Mus musculus ferritin heavy chain 1 (Fth1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O [goid 4322] [evidence IEA]	Fth; FHC; AL033366; AL022624; MFH	Fth; FHC; AL033366; AL022624; MFH
Mus musculus	RefSeq	ILMN_222089	ILMN_222089	FTH1	NM_010239.1	NM_010239.1		14319	6753911	NM_010239.1	Fth1	NP_034369.1	ILMN_2876071	001580280	S	767	GCATGTCAGGCTGCCTTCATCTTTTCTATAAGTTGCACCAAAACATCTGC	19	+	10059483-10059532	19qA	Mus musculus ferritin heavy chain 1 (Fth1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O [goid 4322] [evidence IEA]	Fth; FHC; AL033366; AL022624; MFH	Fth; FHC; AL033366; AL022624; MFH
Mus musculus	RefSeq	ILMN_221810	ILMN_221810	NDRG3	NM_013865.1	NM_013865.1		29812	7305306	NM_013865.1	Ndrg3	NP_038893.1	ILMN_2740628	004070377	S	2257	CCTTTATCAGAGGGAAGGGGACAAACTCAGGGCAGCCCTGTCCAGGTAGA	2	-	156753307-156753356	2qH1	Mus musculus N-myc downstream regulated gene 3 (Ndrg3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]			AI747193; 4833415O14Rik; Ndr3	AI747193; 4833415O14Rik; Ndr3
Mus musculus	Riken	ILMN_206950	ILMN_206950	SLC12A3	ri|D630024L03|PX00197M14|AK085430|3172					AK085430	Slc12a3		ILMN_1225762	006420280	S	2912	CCCCCAGTCTTTTATACAGAGGATCTTCCATGAGCCAGGCCCGTTGCCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216574	ILMN_216574	LRP11	NM_172784.2	NM_172784.2		237253	118129948	NM_172784.2	Lrp11	NP_766372.1	ILMN_2672708	000870619	S	3142	GAGATGAATGTTGAGTGAACTTACCTACACTCTGTGATGCTGTGCGGCTC	10	+	7345037-7345086	10qA1	Mus musculus low density lipoprotein receptor-related protein 11 (Lrp11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1700034J19Rik; 9830160H19Rik; 6330533B21	1700034J19Rik; 9830160H19Rik; 6330533B21
Mus musculus	RefSeq	ILMN_223241	ILMN_223241	CBLN2	NM_172633.3	NM_172633.3		12405	146198537	NM_172633.3	Cbln2	NP_766221.1	ILMN_1216226	002360181	S	1440	TCAGTCCTTGTATGAGACCAAACAAAACAGAACAAAATCTGCATACTTTG				18qE4	Mus musculus cerebellin 2 precursor protein (Cbln2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A730004O05; 6330593N19Rik	A730004O05; 6330593N19Rik
Mus musculus	RefSeq	ILMN_219230	ILMN_219230	SEC31A	XM_132230.8	XM_132230.8		69162	149254025	XM_132230.8	Sec31a	XP_132230.8	ILMN_2705966	007330048	S	4003	CACTTCTCCAAAGAAAGCCATGCTAAGACTGGGACCAGCCCCTCGTTAGC	5	-	100790992-100791041	5qE4	PREDICTED: Mus musculus SEC31 homolog A (S. cerevisiae) (Sec31a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]			
Mus musculus	Riken	ILMN_202371	ILMN_202371	4930510I22RIK	ri|4930510I22|PX00033I16|AK015743|534					AK015743	4930510I22Rik		ILMN_2549104	007510224	S	238	TGCTGTCGCAGACTTGGCGTCACTTCCGGTCCCGGCGCGTTTTACTACGC										
Mus musculus	RefSeq	ILMN_222705	ILMN_222705	OLFR122	NM_146288.2	NM_146288.2		258285	120953212	NM_146288.2	Olfr122	NP_666400.2	ILMN_2753678	006250398	S	802	GGCTCAACGTCTGCCACCTATTTGAGGCCCAAATCTGATCACTCACCAGA	17	+	37909374-37909423	17qB1	Mus musculus olfactory receptor 122 (Olfr122), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR263-10	MOR263-10
Mus musculus	RefSeq	ILMN_217350	ILMN_217350	ELOVL3	NM_007703.1	NM_007703.1		12686	6671751	NM_007703.1	Elovl3	NP_031729.1	ILMN_2682207	006220070	S	1561	GGCTAAACTGCAGAAGAGATCGCTGCGTGGAAGCACGGGTGACCAGACCT	19	+	46209866-46209915	19qC3	Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3 (Elovl3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]		CIN-2; Cig30	CIN-2; Cig30
Mus musculus	RefSeq	ILMN_217288	ILMN_217288	LZTR1	NM_025808.3	NM_025808.3		66863	142385564	NM_025808.3	Lztr1	NP_080084.2	ILMN_2681492	004570086	S	3053	AGTTATTATTAAACTCAGAGCTGCAGCGGCACTAACTGAACAGCCCTCTC	16	+	17526368-17526417	16qA3	Mus musculus leucine-zipper-like transcriptional regulator, 1 (Lztr1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1200003E21Rik; AW550890; TCFL2; AI591627	1200003E21Rik; AW550890; TCFL2; AI591627
Mus musculus	RefSeq	ILMN_223704	ILMN_243309	1700012A16RIK	NM_001033162.2	NM_001033162.2		71836	142362585	NM_001033162.2	1700012A16Rik	NP_001028334.1	ILMN_1218141	000380546	S	1690	CCAGCACCCAAACTGAAGATGACGAACAATCATATCTACAACAACAATGG	1	+	155299349-155299398	1qG3	Mus musculus RIKEN cDNA 1700012A16 gene (1700012A16Rik), mRNA.				MGC130601	MGC130601
Mus musculus	RefSeq	ILMN_199686	ILMN_199686	LOC382885	XM_356731.1	XM_356731.1			38076101	XM_356731.1	LOC382885		ILMN_2536116	000940678	S	92	GGGGGACTCTGCGGAGGGACTTCAATCACATCAACGTGGAGCTGAGTCTC										
Mus musculus	MEEBO	ILMN_213511	ILMN_213511	4933407P14RIK	scl0237958.1_330	NM_199019.1			39841036	NM_199019.1	4933407P14Rik		ILMN_2637804	005910156	S	2171	GCACGGGGATGCTAGACAGGATAAGAGATCGGGCATTAGAGAAACTCCCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]		
Mus musculus	Riken	ILMN_202833	ILMN_202833	6030449M12RIK	ri|6030449M12|PX00057O16|AK031546|1738					AK031546	6030449M12Rik		ILMN_2552652	002490494	S	1413	AATGGGAGGAAACTCCTGAGGCCCACCCCTACTGGCGGAGCTACTGGCAA										
Mus musculus	MEEBO	ILMN_190384	ILMN_190384	5530601H04RIK	scl071445.4_29				51772281	XM_489360	5530601H04Rik		ILMN_2503492	006520670	S	4	CCTTAGTCTTTCCTTAGATTATATGAACATGCTGGAAATGGGCTATCAAA										
Mus musculus	MEEBO	ILMN_190384	ILMN_190384	5530601H04RIK	scl071445.4_29				51772281	XM_489360	5530601H04Rik		ILMN_1221284	005960154	S	19	GATCTGAGAAAATTGGATTTCTGGCAAAACAAGTGTACCTAGACTCAGGC										
Mus musculus	RefSeq	ILMN_201374	ILMN_201374	LOC385060	XM_358024.1	XM_358024.1			38093402	XM_358024.1	LOC385060		ILMN_1252042	007650678	S	2	TGAGGACCCCAAGGGTGGAGACCATTGGCGATGCCTATTGTGTAGCTGGG										
Mus musculus	RefSeq	ILMN_257856	ILMN_257856	KIF3B	NM_008444.2	NM_008444.2		16569	31560674	NM_008444.2	Kif3b	NP_032470.2	ILMN_2911102	003890554	S	3992	GTCTCCAGGTACATTTCTGGACAGAGCCCATGGAAGGAGGAGTAACGTGC	2	+	153023204-153023253	2qH1	Mus musculus kinesin family member 3B (Kif3b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	AI854312; AW549267; mKIAA0359	AI854312; AW549267; mKIAA0359
Mus musculus	RefSeq	ILMN_234262	ILMN_234262	NIN	NM_001081453.1	NM_001081453.1		18080	125346100	NM_001081453.1	Nin	NP_001074922.1	ILMN_3144668	002140372	A	5353	CTCCAAGTGACTCGACAGGAAAAGGAGGCGCTAAAGCAGGAAGTGATGTC	12	-	71131006-71131055	12qC2	Mus musculus ninein (Nin), transcript variant 1, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI385615; 3110068G20Rik; AU024711; mKIAA1565	AI385615; 3110068G20Rik; AU024711; mKIAA1565
Mus musculus	RefSeq	ILMN_186421	ILMN_234262	NIN	NM_001081453.1	NM_001081453.1		18080	125346100	NM_001081453.1	Nin	NP_001074922.1	ILMN_2435413	000510504	S	9302	CAGTCAGGAGAGCGTGGCTGCCCCTACTTGAACATCTTAGCACTGTGAAG	12	-	71112745-71112794	12qC2	Mus musculus ninein (Nin), transcript variant 1, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI385615; 3110068G20Rik; AU024711; mKIAA1565	AI385615; 3110068G20Rik; AU024711; mKIAA1565
Mus musculus	RefSeq	ILMN_211245	ILMN_211245	BOLA3	NM_175277.2	NM_175277.2		78653	31341507	NM_175277.2	Bola3	NP_780486.1	ILMN_2990197	001430176	S	164	GAGCCACAGCTATTCAAGTCACAGACATCTCAGGAGGCTGCGGGGCCATG	6	+	83317016-83317047:83318700-83318717	6qC3	Mus musculus bolA-like 3 (E. coli) (Bola3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810056O20Rik	1810056O20Rik
Mus musculus	RefSeq	ILMN_212105	ILMN_212105	OLFR730	NM_146493.2	NM_146493.2		258486	116174775	NM_146493.2	Olfr730	NP_666704.2	ILMN_1224969	001740438	S	851	ACCCAGTGATATATACTTTGAGAAATCATGAAGTAAATTCAGCCATGAGG	14	-	50805993-50806042	14qC1	Mus musculus olfactory receptor 730 (Olfr730), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR247-1	MOR247-1
Mus musculus	MEEBO	ILMN_187498	ILMN_187498	2900037O03RIK	scl072907.1_70						2900037O03Rik		ILMN_2444662	004120709	S	16	GAGGATGCGGATGAAATGTCAGCTGTGTCCACGTGTCCACGTGCCCTTGA										
Mus musculus	RefSeq	ILMN_208718	ILMN_229381	DDX31	NM_001033294.2	NM_001033294.2		227674	141802168	NM_001033294.2	Ddx31	NP_001028466.1	ILMN_1242905	001770129	S	1916	GCCCTACACCTTGGGCACGTGGCTAAGAGTTTTGGACTAAGAGATGCTCC	2	+	28747967-28748016	2qA3	Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 (Ddx31), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm997; 5830444G11Rik	Gm997; 5830444G11Rik
Mus musculus	RefSeq	ILMN_208718	ILMN_229381	DDX31	NM_001033294.2	NM_001033294.2		227674	141802168	NM_001033294.2	Ddx31	NP_001028466.1	ILMN_2588860	002470630	S	2208	ACCAGCCAGCAAGCTTCTTTTGGTTGTTTTTTAGTTGCTACAGGACCGGG	2	+	28760306-28760355	2qA3	Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 31 (Ddx31), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm997; 5830444G11Rik	Gm997; 5830444G11Rik
Mus musculus	Riken	ILMN_201768	ILMN_201768	2500002E12RIK	ri|2500002E12|ZX00052H24|AK010852|1492					AK010852	2500002E12Rik		ILMN_1235919	001030280	S	1151	AGCCGCTCGCTGAGTTCGAGTTTAAGAGGAGTCCGTATGGTGACAACCCC										
Mus musculus	RefSeq	ILMN_209666	ILMN_209666	GHRL	NM_021488.4	NM_021488.4		58991	142358944	NM_021488.4	Ghrl	NP_067463.2	ILMN_2598022	006180598	S	308	CTCAGTATCAGCAGCATGGCCGGGCCCTGGGGAAGTTTCTTCAGGATATC	6	-	113667065-113667114	6qE3	Mus musculus ghrelin (Ghrl), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence ISO]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51965] [evidence ISO]; Any process that activates, maintains or increases the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51965] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that increases appetite [goid 32100] [evidence IDA]; Any process that increases appetite [goid 32100] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence ISO]; Any process that increases appetite [goid 32100] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of locomotion of a cell or organism [goid 40013] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IMP]	 [goid 16608] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence TAS]	MTLRPAP; m46; MTLRP; 2210006E23Rik	MTLRPAP; m46; MTLRP; 2210006E23Rik
Mus musculus	RefSeq	ILMN_209666	ILMN_209666	GHRL	NM_021488.4	NM_021488.4		58991	142358944	NM_021488.4	Ghrl	NP_067463.2	ILMN_2643658	002470619	S	401	GGACAGGCCTGACCCCCGTGCTTTCCTTCTCCTGAGCAAGAACTCACATC	6	-	113666189-113666238	6qE3	Mus musculus ghrelin (Ghrl), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence ISO]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51965] [evidence ISO]; Any process that activates, maintains or increases the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51965] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that increases appetite [goid 32100] [evidence IDA]; Any process that increases appetite [goid 32100] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence ISO]; Any process that increases appetite [goid 32100] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of locomotion of a cell or organism [goid 40013] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IMP]	 [goid 16608] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence TAS]	MTLRPAP; m46; MTLRP; 2210006E23Rik	MTLRPAP; m46; MTLRP; 2210006E23Rik
Mus musculus	RefSeq	ILMN_219577	ILMN_219577	SQSTM1	NM_011018.2	NM_011018.2		18412	118130186	NM_011018.2	Sqstm1	NP_035148.1	ILMN_2710705	004560619	S	1436	GGCCCAGTGTCTTGGCATTCTTGTAGAATCTTCAGGTGGGAATGTGTGAT	11	-	50014168-50014217	11qB1.3	Mus musculus sequestosome 1 (Sqstm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence TAS]	STAP; OSF-6; p62; A170; Osi	STAP; OSF-6; p62; A170; Osi
Mus musculus	RefSeq	ILMN_255891	ILMN_255891	EG436332	NM_001013830.1	NM_001013830.1		436332	85701509	NM_001013830.1	EG436332	NP_001013852.1	ILMN_2827515	003060010	S	960	CCACGGCGGCTGGCAGTCAGGATGCAGCAAAATTTTATCAGAAGCAGGGC	16	+	4145417-4145466	16qA1	Mus musculus predicted gene, EG436332 (EG436332), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200791	ILMN_200791	LOC381860	XM_355873.1	XM_355873.1			38086179	XM_355873.1	LOC381860		ILMN_2540020	000270168	S	4238	ACCATGCAGCCATGTTGTGTGGGGCCTGTGGAAACTTTGATGGGGACCGG										
Mus musculus	RefSeq	ILMN_218504	ILMN_234711	SLC39A2	XM_989901.1	XM_989901.1		214922	94398035	XM_989901.1	Slc39a2	XP_994995.1	ILMN_2696656	004670725	S	2125	GTCTCCACACAACCAGGGATCAAGGAAAAAGCAAATGGGTGGGCAATGCT				14qC2	PREDICTED: Mus musculus solute carrier family 39 (zinc transporter), member 2, transcript variant 3 (Slc39a2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214179	ILMN_214179	ARHGEF3	NM_027871.1	NM_027871.1		71704	27229119	NM_027871.1	Arhgef3	NP_082147.1	ILMN_2645208	004480468	S	3474	GAGTCAAGGTCTGTCAGCCTGTGGGAAGAGAGTGGACGGATGTTTTGGTG	14	+	28216979-28217028	14qA3	Mus musculus Rho guanine nucleotide exchange factor (GEF) 3 (Arhgef3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1200004I24Rik; 9830169H03Rik; C76747	1200004I24Rik; 9830169H03Rik; C76747
Mus musculus	RefSeq	ILMN_256338	ILMN_256338	NPHP3	NM_028721.2	NM_028721.2		74025	50878276	NM_028721.2	Nphp3	NP_082997.2	ILMN_3162526	006770544	I	4730	ACACATGGAGGACAGAGGTCAGCCTTGGGTATCATTCCTCAGGCGCTGTC	9	+	103945037-103945086	9qF1	Mus musculus nephronophthisis 3 (adolescent) (Nphp3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the identity of an organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized [goid 48496] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D330020E01Rik; 3632410F03Rik; AI550417; C230078J01; pcy; MGC141550	D330020E01Rik; 3632410F03Rik; AI550417; C230078J01; pcy; MGC141550
Mus musculus	MEEBO	ILMN_184504	ILMN_184504	GOLPH4	scl22057.17_616				31340844	NM_175193	Golph4		ILMN_2419183	002480619	S	10	TCATCATCAAACTTCTTTGAAAGAAGAAGCTAATAATTTCCATTATCTTT										
Mus musculus	RefSeq	ILMN_189694	ILMN_189694	ZFP9	NM_011763.2	NM_011763.2		22750	123700905	NM_011763.2	Zfp9	NP_035893.1	ILMN_2463555	001470025	S	3815	ACACTTACTGAATTGTTACGTTAAAGCATATCTCCTGATGGAATGTAATA	6	-	118412024-118412073	6qF1	Mus musculus zinc finger protein 9 (Zfp9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfp-9; AU016736; mszf79-2; 1810048F22Rik; Krox-4	Zfp-9; AU016736; mszf79-2; 1810048F22Rik; Krox-4
Mus musculus	RefSeq	ILMN_198525	ILMN_198525	LOC212556	XM_124873.4	XM_124873.4		212556	63565494	XM_124873.4	LOC212556	XP_124873.4	ILMN_2792971	006590671	S	800	CTCATCTCTTCATACGGCTTGTCAGTGAGGTTCTGGCTGCAGTCTTCCCC	7	-	21504639-21504688		PREDICTED: Mus musculus gene model 58, (NCBI) (LOC212556), mRNA.					
Mus musculus	RefSeq	ILMN_194710	ILMN_236392	LOC674107	XM_975117.1	XM_975117.1		674107	94393694	XM_975117.1	LOC674107	XP_980211.1	ILMN_1226778	000010367	S	226	GGAAAGGGTTTAAAGTGGATGGGCTGGATAAACACTGAGACTGGTGAGCC					PREDICTED: Mus musculus similar to Ig heavy chain V-I region V35 precursor (LOC674107), mRNA.					
Mus musculus	RefSeq	ILMN_213753	ILMN_213753	WDR55	NM_026464.2	NM_026464.2		67936	31980932	NM_026464.2	Wdr55	NP_080740.2	ILMN_2640453	004920370	S	1044	TTGTGGATGACTATCGGCGACGCAAGAAAAAGGGAGGGCCGCTTCGTGCC	18	+	36922908-36922957	18qB2	Mus musculus WD repeat domain 55 (Wdr55), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410080P20Rik; C80692	2410080P20Rik; C80692
Mus musculus	RefSeq	ILMN_217662	ILMN_217662	CUTC	NM_025530.1	NM_025530.1		66388	13384951	NM_025530.1	Cutc	NP_079806.1	ILMN_2834370	006840438	S	1154	GAAGAGAGGCGTAGTCATTCTCAGTGGGCTTAACTGATGAACTGGCAAAG	19	+	43821798-43821847	19qC3	Mus musculus cutC copper transporter homolog (E.coli) (Cutc), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The regulation of the levels, transport, and metabolism of copper ions [goid 55070] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI326282; 2310039I18Rik; CGI-32	AI326282; 2310039I18Rik; CGI-32
Mus musculus	RefSeq	ILMN_210570	ILMN_210570	RBX1	NM_019712.3	NM_019712.3		56438	112181183	NM_019712.3	Rbx1	NP_062686.1	ILMN_1230583	004200162	S	1425	GCTGGTTCAGTGGCTGTATTCTACCGAGACACCGTTTCTGTTGCTGTGGT	15	+	81306569-81306618	15qE1	Mus musculus ring-box 1 (Rbx1), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence TAS]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1) [goid 19005] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence ISS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Interacting selectively with eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation [goid 8190] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1500002P15Rik; AA517855	1500002P15Rik; AA517855
Mus musculus	RefSeq	ILMN_210570	ILMN_210570	RBX1	NM_019712.3	NM_019712.3		56438	112181183	NM_019712.3	Rbx1	NP_062686.1	ILMN_2606947	002370370	S	488	GGAGTTTGGTGTTCCCGCAGCCATATTGTATTTTGTGTCAAATAAAGCCT	15	+	81305632-81305681	15qE1	Mus musculus ring-box 1 (Rbx1), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence TAS]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1) [goid 19005] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence ISS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Interacting selectively with eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation [goid 8190] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1500002P15Rik; AA517855	1500002P15Rik; AA517855
Mus musculus	RefSeq	ILMN_210312	ILMN_210312	THEM2	NM_025790.1	NM_025790.1		66834	13385259	NM_025790.1	Them2	NP_080066.1	ILMN_2961626	004880326	S	596	CCTGGGGAACTGAGAACAGCGGGAAGACCCGAAGAAGCCCAACAATGCCA	13	-	24825460-24825499:24825500-24825509	13qA3.1	Mus musculus thioesterase superfamily member 2 (Them2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RP23-92G13.5; 0610006O17Rik	RP23-92G13.5; 0610006O17Rik
Mus musculus	Riken	ILMN_204866	ILMN_204866	A130095K04RIK	ri|A130095K04|PX00125K20|AK038322|1595					AK038322	A130095K04Rik		ILMN_1257803	001510162	S	1295	CCCAAGATGTGATGGCCACTGTCCCATGAAGCAATGGAGTAGCATGGGCC										
Mus musculus	RefSeq	ILMN_190696	ILMN_236250	TDP1	NM_028354.3	NM_028354.3		104884	146141146	NM_028354.3	Tdp1	NP_082630.1	ILMN_1222101	004880475	S	3892	CTGCCCAAGTAAGCAGACACTAAGGGGCTACAGAGTTCTTTTGTTTGCAG				12qE	Mus musculus tyrosyl-DNA phosphodiesterase 1 (Tdp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group [goid 8081] [evidence IEA]	SCAN1; 4921509N21Rik; 2810481F14Rik; AI838772; E430034L06Rik; AW493413	SCAN1; 4921509N21Rik; 2810481F14Rik; AI838772; E430034L06Rik; AW493413
Mus musculus	MEEBO	ILMN_191437	ILMN_191437	C030032C09RIK	scl077531.7_197						C030032C09Rik		ILMN_2479069	001190390	S	19	ATGTCTCTGTGGAGTATTTGTATGATACCATAATGTATATTTCTGTAGAA										
Mus musculus	RefSeq	ILMN_198671	ILMN_262036	LOC674859	XR_004694.1	XR_004694.1		674859	94408192	XR_004694.1	LOC674859		ILMN_1232796	003060343	S	707	TCAAAACGCCAGAGATCCAAGACACAGAGGATAAGAAGGGTGCTCAGGGG					PREDICTED: Mus musculus similar to mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (LOC674859), mRNA.					
Mus musculus	Riken	ILMN_205766	ILMN_205766	PPP1R1C	ri|C920018C16|PX00178K12|AK050613|1688					AK050613	Ppp1r1c		ILMN_1247030	004610600	S	1036	GGAGCAGTGTGCACCAACTAGGAGCAGTGGGCAGCTGTATGTGCTAGAGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199232	ILMN_238949	LOC671434	XR_003421.1	XR_003421.1		671434	94392142	XR_003421.1	LOC671434		ILMN_1232613	006520114	S	1018	GGGCCATAGAGATAAAATCCAGCGAGCTGCCTCTGACTGCTGGTGTCTCC					PREDICTED: Mus musculus similar to Targeting protein for Xklp2 (Restricted expression proliferation associated protein 100) (p100) (Differentially expressed in cancerous and noncancerous lung cells 2) (DIL-2) (Protein FLS353) (Hepatocellular carcinoma-associated antigen 5... (LOC671434), mRNA.					
Mus musculus	RefSeq	ILMN_256104	ILMN_256104	CHIC1	NM_009767.1	NM_009767.1		12212	55742748	NM_009767.1	Chic1	NP_033897.1	ILMN_2816660	006250390	S	756	CCCTTAGTGCCTTGTAGATGATCTTGGAATGGAGACAGTCTCCTTCGCTG	X	+	100584892-100584941	XqD	Mus musculus cysteine-rich hydrophobic domain 1 (Chic1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Brx	Brx
Mus musculus	RefSeq	ILMN_236715	ILMN_236715	ASB13	NM_178283.3	NM_178283.3		142688	118129855	NM_178283.3	Asb13	NP_840068.1	ILMN_3104025	004070075	A	2221	GGCACTGGAGTCTGCCTCTTTCGTCTTTGTAACAGAATCTTGCCTCTAGC	13	+	3650880-3650929	13qA1	Mus musculus ankyrin repeat and SOCS box-containing 13 (Asb13), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2210015B19Rik; Asb-13; 6430573K02Rik; C85285	2210015B19Rik; Asb-13; 6430573K02Rik; C85285
Mus musculus	RefSeq	ILMN_216714	ILMN_236715	ASB13	NM_178283.3	NM_178283.3		142688	118129855	NM_178283.3	Asb13	NP_840068.1	ILMN_2674383	002120204	S	1953	GGTCACAATTTCTTCCTATAGTAATAACAATGAGTCCTGTACATTGTGGG	13	+	3650612-3650661	13qA1	Mus musculus ankyrin repeat and SOCS box-containing 13 (Asb13), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2210015B19Rik; Asb-13; 6430573K02Rik; C85285	2210015B19Rik; Asb-13; 6430573K02Rik; C85285
Mus musculus	RefSeq	ILMN_223127	ILMN_223127	EPC1	NM_027497.2	NM_027497.2		13831	142350580	NM_027497.2	Epc1	NP_081773.1	ILMN_2759678	001580411	S	139	TCCCCGGCAGCGGCAGGCGAGTGGAGACCGAAACTCCGGTTCTCCATGAT	18	-	6490666-6490715	18qA1	Mus musculus enhancer of polycomb homolog 1 (Drosophila) (Epc1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]; Any epigenetic process that stops, prevents or reduces the rate of gene expression [goid 45814] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]		A930032N02Rik; 5730566F07Rik; 2400007E14Rik	A930032N02Rik; 5730566F07Rik; 2400007E14Rik
Mus musculus	MEEBO	ILMN_221985	ILMN_221985	D030041N04RIK	scl000706.1_6				33416954	BC055685	D030041N04Rik		ILMN_2743072	003800703	S	1635	GGAATACCGACACCTCCACCCCCCGAGTCAAAGGAGAACCTCACAGACTC										
Mus musculus	RefSeq	ILMN_219493	ILMN_219493	1700128F08RIK	NM_029697.1	NM_029697.1		76669	21624628	NM_029697.1	1700128F08Rik	NP_083973.1	ILMN_2709557	006330674	S	1035	ATTAATTTGAGCACTCAAAAGCAAGGATGAAATTTAATCACATTCAAACA	9	+	8242433-8242482	9qA1	Mus musculus RIKEN cDNA 1700128F08 gene (1700128F08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198100	ILMN_247801	EG627743	XM_913431.3	XM_913431.3		627743	149269034	XM_913431.3	EG627743	XP_918524.3	ILMN_1229317	007610709	S	1956	AGTTGGTTTTTGTGGAACATGGATGGCAACCTCTCCTCCATTCATCGACC				17qA3.2	PREDICTED: Mus musculus predicted gene, EG627743 (EG627743), mRNA.					
Mus musculus	Riken	ILMN_206209	ILMN_206209	INSRR	ri|C130025G13|PX00168I09|AK081512|2611					AK081512	Insrr		ILMN_1228296	001990634	S	2422	TGAAGAGGGCAACAGAGGTTTCTGAGAGCCCTGGAGATCATTCTGCTAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191460	ILMN_224727	SYNPO2L	NM_175132.3	NM_175132.3		68760	118129847	NM_175132.3	Synpo2l	NP_780341.1	ILMN_1214563	007570168	S	3682	CCTGTGGGGGTCAAGAGCTACTACAGAAAAACTCCTGAGAGAGGAGTGCC	14	-	21478830-21478879	14qA3	Mus musculus synaptopodin 2-like (Synpo2l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110054M18Rik	1110054M18Rik
Mus musculus	RefSeq	ILMN_196904	ILMN_196904	LOC381256	XM_358537.1	XM_358537.1			38049494	XM_358537.1	LOC381256		ILMN_2526204	004060152	S	605	GTCCTACCACAGGACTTGCCTCGCAAAACACCACATGAGTCTGTATCACC										
Mus musculus	RefSeq	ILMN_210450	ILMN_253912	9030025P20RIK	NM_001039552.1	NM_001039552.1		381062	88703057	NM_001039552.1	9030025P20Rik	NP_001034641.1	ILMN_2605712	000650706	S	818	ATCCAACTTCCTATTAAAAATCATGTTGCCATATTGGGAAATGGCAGTGA	17	+	15186474-15186523	17qA2	Mus musculus RIKEN cDNA 9030025P20 gene (9030025P20Rik), transcript variant 1, mRNA.				2210404J11Rik; 2410011O22Rik	2210404J11Rik; 2410011O22Rik
Mus musculus	RefSeq	ILMN_220034	ILMN_253912	9030025P20RIK	NM_001039552.1	NM_001039552.1		381062	88703057	NM_001039552.1	9030025P20Rik	NP_001034641.1	ILMN_2716783	006900593	S	1820	GGAGTTGGCCAGTGTCCATGCTGTTCGTGATAAGGGCGCTGAGGAACAAC	17	+	15198084-15198133	17qA2	Mus musculus RIKEN cDNA 9030025P20 gene (9030025P20Rik), transcript variant 1, mRNA.				2210404J11Rik; 2410011O22Rik	2210404J11Rik; 2410011O22Rik
Mus musculus	RefSeq	ILMN_261340	ILMN_261340	SCML2	NM_133194.3	NM_133194.3		107815	118403327	NM_133194.3	Scml2	NP_573457.3	ILMN_3017953	005420630	I	4300	TCAGGTGATAAGAAACTGCCCATAAATTGGCTCCCACATAGGGAAGCTCT	X	+	157695598-157695647	XqF4	Mus musculus sex comb on midleg-like 2 (Drosophila) (Scml2), mRNA.				4932420G07Rik	4932420G07Rik
Mus musculus	RefSeq	ILMN_261340	ILMN_261340	SCML2	NM_133194.3	NM_133194.3		107815	118403327	NM_133194.3	Scml2	NP_573457.3	ILMN_3089660	001580243	A	3037	CGTGAGGCTCAAGTTCCTACCCCAGATACAGGCACTGATCAAAGCAAACC	X	+	157681429-157681478	XqF4	Mus musculus sex comb on midleg-like 2 (Drosophila) (Scml2), mRNA.				4932420G07Rik	4932420G07Rik
Mus musculus	RefSeq	ILMN_185642	ILMN_261340	SCML2	NM_133194.3	NM_133194.3		107815	118403327	NM_133194.3	Scml2	NP_573457.3	ILMN_2428762	005910546	S	4298	ATTCAGGTGATAAGAAACTGCCCATAAATTGGCTCCCACATAGGGAAGCT	X	+	157695596-157695645	XqF4	Mus musculus sex comb on midleg-like 2 (Drosophila) (Scml2), mRNA.				4932420G07Rik	4932420G07Rik
Mus musculus	RefSeq	ILMN_203182	ILMN_261340	SCML2	NM_133194.3	NM_133194.3		107815	118403327	NM_133194.3	Scml2	NP_573457.3	ILMN_1259859	006370349	S	3229	GAAGAGTGAGCTGCTGATGAAGTATATGGGGCTGAAACTAGGACCAGCAG	X	+	157694527-157694576	XqF4	Mus musculus sex comb on midleg-like 2 (Drosophila) (Scml2), mRNA.				4932420G07Rik	4932420G07Rik
Mus musculus	RefSeq	ILMN_219256	ILMN_219256	SRPRB	NM_009275.4	NM_009275.4		20818	142375873	NM_009275.4	Srprb	NP_033301.1	ILMN_2744512	002340204	S	2804	TCTTCCATGGAGCCACGGCAGAAGCAGCTTCTCACTGCTAGGTGCCTTGT	9	-	103090500-103090549	9qF1	Mus musculus signal recognition particle receptor, B subunit (Srprb), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AA409543	AA409543
Mus musculus	RefSeq	ILMN_219256	ILMN_219256	SRPRB	NM_009275.4	NM_009275.4		20818	142375873	NM_009275.4	Srprb	NP_033301.1	ILMN_1244768	002810136	S	1062	CAGAGAGGGCATCGCTTTGAGAGTAGGGTCGCATCTGAGAAGTCCTTGTC	9	-	103092242-103092291	9qF1	Mus musculus signal recognition particle receptor, B subunit (Srprb), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AA409543	AA409543
Mus musculus	RefSeq	ILMN_219256	ILMN_219256	SRPRB	NM_009275.4	NM_009275.4		20818	142375873	NM_009275.4	Srprb	NP_033301.1	ILMN_2726705	003310110	S	1769	GAGTGCTATGGAACAATACAAACTGAAGATGTCCACTGTGCATTTTAAAT	9	-	103091535-103091584	9qF1	Mus musculus signal recognition particle receptor, B subunit (Srprb), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AA409543	AA409543
Mus musculus	RefSeq	ILMN_196340	ILMN_196340	PBLD	NM_026701.2	NM_026701.2		68371	31560131	NM_026701.2	Pbld	NP_080977.2	ILMN_1245913	006060133	S	1693	GGCTCAGGGTATGGTCCTGAGCAACATGCAAAAGTCCATCTCCTGATGTA	10	+	62540034-62540083	10qB4	Mus musculus phenazine biosynthesis-like protein domain containing (Pbld), mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Mawbp; 0610038K03Rik	Mawbp; 0610038K03Rik
Mus musculus	RefSeq	ILMN_216896	ILMN_216896	OPTN	NM_181848.3	NM_181848.3		71648	40254333	NM_181848.3	Optn	NP_862896.1	ILMN_2907370	006650438	S	2064	CCAGGACAGGTGAGAGATAGGGACAAGCTCAGGATTGGAGTCCTTCCCTC	2	-	4938213-4938262	2qA1	Mus musculus optineurin (Optn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FIP2; HYPL; NRP; 4930441O07Rik	FIP2; HYPL; NRP; 4930441O07Rik
Mus musculus	RefSeq	ILMN_192311	ILMN_231254	4930505D03RIK	XM_986569.1	XM_986569.1		74694	94389750	XM_986569.1	4930505D03Rik	XP_991663.1	ILMN_2486934	002510288	S	114	CCCACCTGACCCGGAGCGTCCAGGAGACTCCACAAAAACCTGACTATCTG				10qD2	PREDICTED: Mus musculus RIKEN cDNA 4930505D03 gene (4930505D03Rik), mRNA.					
Mus musculus	Riken	ILMN_202757	ILMN_202757	4930529M08RIK	ri|4930529M08|PX00034F07|AK019712|2255					AK019712	4930529M08Rik		ILMN_2552055	005560053	S	1803	TCTCTACTATCCTGTGTACCCCCAGACCCGGGAAGGCAAGGTGAGAGGCT										
Mus musculus	MEEBO	ILMN_190038	ILMN_190038	ADRA1B	scl40319.5_436				6680659	NM_007416	Adra1b		ILMN_2606415	000060392	S	2189	CTGCGACACCACAACTGACCTGGCCAACGGGCAGCCGGGCTTCAAGAGCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen [goid 45818] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glycogen [goid 45819] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; A process that is triggered by vasomotor excitation and results in a decrease in the diameter of an artery during the baroreceptor response to decreased blood pressure [goid 1987] [evidence IMP]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IGI]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IGI]	 [goid 4937] [evidence IMP];  [goid 4937] [evidence IGI];  [goid 4937] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4935] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216542	ILMN_216542	CLCF1	NM_019952.1	NM_019952.1		56708	9910313	NM_019952.1	Clcf1	NP_064336.1	ILMN_2926729	006520600	S	423	ACAGTCACCTCCTGTGTTACTTGCGTGGCCTCAACCGTCAGGCTGCCACA	19	+	4222220-4222269	19qA	Mus musculus cardiotrophin-like cytokine factor 1 (Clcf1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IDA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	MGC129163; CLC; Bsf3; MGC129162	MGC129163; CLC; Bsf3; MGC129162
Mus musculus	RefSeq	ILMN_199619	ILMN_224753	MACROD2	NM_001013802.2	NM_001013802.2		72899	148227059	NM_001013802.2	Macrod2	NP_001013824.2	ILMN_2535881	003830682	S	569	AGCTGCTGGCCCCTGTTTGTTAGCTGAGTGTCGGAACCTGAACGGCTGTG				2qF3	Mus musculus MACRO domain containing 2 (Macrod2), transcript variant 1, mRNA.				2610107G07Rik; 1110033L15Rik; 2900006F19Rik; MGC100276	2610107G07Rik; 1110033L15Rik; 2900006F19Rik; MGC100276
Mus musculus	MEEBO	ILMN_193210	ILMN_193210	2610037D02RIK	scl0070040.1_94						2610037D02Rik		ILMN_2495022	002810056	S	7	GTCCATGTGGTCCTAAGGTAACAGGGGTAGATTTACAGTATGGGCGGGAG										
Mus musculus	RefSeq	ILMN_221793	ILMN_221793	LGI1	NM_020278.2	NM_020278.2		56839	42734452	NM_020278.2	Lgi1	NP_064674.1	ILMN_2740419	006040176	S	3536	AAGCAACATCATCATATGCTGCTGGAGGACGCCTGCACTGTACAGTCGGA	19	+	38382706-38382755	19qC3	Mus musculus leucine-rich repeat LGI family, member 1 (Lgi1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BB130740	BB130740
Mus musculus	RefSeq	ILMN_221793	ILMN_221793	LGI1	NM_020278.2	NM_020278.2		56839	42734452	NM_020278.2	Lgi1	NP_064674.1	ILMN_2821730	005260025	S	3923	GCAAATTGGAACACTTGCCTGCAGAGCCCAGAACATCTGCATAAGAAGTC	19	+	38383093-38383142	19qC3	Mus musculus leucine-rich repeat LGI family, member 1 (Lgi1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BB130740	BB130740
Mus musculus	RefSeq	ILMN_197759	ILMN_197759	LOC239554	XM_139464.2	XM_139464.2			28486558	XM_139464.2	LOC239554		ILMN_1249608	006860280	S	1642	CCCAGTGATCTGCCACTAGGCTCCACCTCTTAAGGATCTACCACAGGGGC										
Mus musculus	Riken	ILMN_206651	ILMN_206651	9330160M08RIK	ri|9330160M08|PX00316G21|AK079082|1862					AK079082	9330160M08Rik		ILMN_1221217	002900538	S	1625	TCTGGACTCCCTTAGGTCAGGAATGGAGAGAGGTTCCTATTTCTTGCCCG										
Mus musculus	RefSeq	ILMN_216930	ILMN_216930	ITGB7	NM_013566.1	NM_013566.1		16421	7305192	NM_013566.1	Itgb7	NP_038594.1	ILMN_1227434	000830543	S	2367	CAAAAGTGCGATCACAACCACTGTCAACCCCCGCTTCCAAGGGACAAACG	15	-	102046634-102046683	15qF3	Mus musculus integrin beta 7 (Itgb7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ly69	Ly69
Mus musculus	Riken	ILMN_204707	ILMN_204707	IL10RB	ri|A530048E20|PX00141F05|AK040938|1483					AK040938	Il10rb		ILMN_1256085	005550743	S	1359	CAGAGTCACCTGGCTAGTGGAGGACAAAGATGGAACTGAGGACAAGCTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with interleukin-10 to initiate a change in cell activity [goid 4920] [evidence IMP]		
Mus musculus	RefSeq	ILMN_216433	ILMN_216433	LILRB4	NM_013532.2	NM_013532.2		14728	118129909	NM_013532.2	Lilrb4	NP_038560.1	ILMN_2671056	000650717	S	1323	GTGAATTGAAAGACAATGTAACCAGGGCACACTAATCAATGAAACTTGAA	10	+	51216322-51216371	10qB3	Mus musculus leukocyte immunoglobulin-like receptor, subfamily B, member 4 (Lilrb4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gp49b; CD85K; HM18; LIR-5; ILT3; gp49	Gp49b; CD85K; HM18; LIR-5; ILT3; gp49
Mus musculus	RefSeq	ILMN_216433	ILMN_216433	LILRB4	NM_013532.2	NM_013532.2		14728	118129909	NM_013532.2	Lilrb4	NP_038560.1	ILMN_1236702	000830072	S	817	CCTCATCGGATACCAGTATGGGCACAAAAAGAAGGCTAATGCTTCTGTGA	10	+	51213947-51213984:51214599-51214610	10qB3	Mus musculus leukocyte immunoglobulin-like receptor, subfamily B, member 4 (Lilrb4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gp49b; CD85K; HM18; LIR-5; ILT3; gp49	Gp49b; CD85K; HM18; LIR-5; ILT3; gp49
Mus musculus	RefSeq	ILMN_221783	ILMN_221783	RDH10	NM_133832.2	NM_133832.2		98711	40254110	NM_133832.2	Rdh10	NP_598593.1	ILMN_2804091	003710612	S	1808	CCTCACGGAGCTGCAAACTTGTGTTAGGGGAGGAAGTGGGGGATCTTGTC	1	+	16117277-16117326	1qA3	Mus musculus retinol dehydrogenase 10 (all-trans) (Rdh10), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence ISA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence ISA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	3110069K09Rik; AW549993; AI875664; D1Ertd762e	3110069K09Rik; AW549993; AI875664; D1Ertd762e
Mus musculus	RefSeq	ILMN_242749	ILMN_242749	RNF150	NM_177378.3	NM_177378.3		330812	90991707	NM_177378.3	Rnf150	NP_796352.2	ILMN_3032501	004060255	I	634	AGGGGACCCCGGAGGAGAGAGATGACAATGTCTCTCATCCAAGCGTGCCG	8	+	85387888-85387908:85387909-85387937	8qC2	Mus musculus ring finger protein 150 (Rnf150), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1214; A630007N06Rik; Greul5; KIAA1214	mKIAA1214; A630007N06Rik; Greul5; KIAA1214
Mus musculus	RefSeq	ILMN_190339	ILMN_242749	RNF150	NM_177378.3	NM_177378.3		330812	90991707	NM_177378.3	Rnf150	NP_796352.2	ILMN_2469285	003460603	S	3064	GGGTCTTCTGAGAGCATTTGGGTATCAAGAGGAGAACGAGGTATGATCTG	8	+	85608549-85608598	8qC2	Mus musculus ring finger protein 150 (Rnf150), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1214; A630007N06Rik; Greul5; KIAA1214	mKIAA1214; A630007N06Rik; Greul5; KIAA1214
Mus musculus	RefSeq	ILMN_208699	ILMN_226385	PRIMA1	NM_133364.2	NM_133364.2		170952	84872179	NM_133364.2	Prima1	NP_579942.2	ILMN_1234415	002650280	S	600	ACCGTGGTGACACTGGTGGACATGGATGGCAGGTGGACATGAGCTGACCG	12	-	104435373-104435422	12qE	Mus musculus proline rich membrane anchor 1 (Prima1), mRNA.	Located in the plasma membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31226] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of a substance or cellular entity, such as a protein complex or organelle, to a specific location within, or in the membrane of, a cell [goid 51649] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]	Interacting selectively with any enzyme [goid 19899] [evidence IPI]; Interacting selectively with both a protein or protein complex and a membrane, in order to maintain the localization of the protein at a specific location on the membrane [goid 43495] [evidence IPI]	B230212M13Rik; PRiMA	B230212M13Rik; PRiMA
Mus musculus	Riken	ILMN_205400	ILMN_205400	E030044H19RIK	ri|E030044H19|PX00206L06|AK053220|2258					AK053220	E030044H19Rik		ILMN_1213587	006290220	S	1764	CCACTTGTGCTTCTGGGTCAGTGGCAGATCCAAGCTGCTGCGCTGTTTCT										
Mus musculus	RefSeq	ILMN_257586	ILMN_257586	SPATA22	NM_001045531.1	NM_001045531.1		380709	113865896	NM_001045531.1	Spata22	NP_001038996.1	ILMN_2957488	005490377	S	997	CCAAGACTGATTAGAGGCCGAGTTCACAGGTGTGTTGGACACTACGACCC	11	+	73159269-73159318	11qB4	Mus musculus spermatogenesis associated 22 (Spata22), mRNA.				Gm882	Gm882
Mus musculus	RefSeq	ILMN_200763	ILMN_200763	LOC384537	XM_357699.1	XM_357699.1			38085950	XM_357699.1	LOC384537		ILMN_1234469	002760554	S	754	GAGCTTTCTAACTTAAATAAGAATGTCCCTATTTTCGTGTGCATGCTGTA										
Mus musculus	RefSeq	ILMN_261388	ILMN_261388	RWDD1	NM_025614.1	NM_025614.1		66521	21735426	NM_025614.1	Rwdd1	NP_079890.1	ILMN_2796557	004920523	S	904	AGACTGATGGACTGTCCCAGTCTCCAGAAGAGGCGTGACCGCCACAGCAT	10	-	33686099-33686142:33686143-33686148	10qB1	Mus musculus RWD domain containing 1 (Rwdd1), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2610002D06Rik; 0710001K08Rik; 2700069A07Rik	2610002D06Rik; 0710001K08Rik; 2700069A07Rik
Mus musculus	Riken	ILMN_205640	ILMN_205640	9530082M04RIK	ri|9530082M04|PX00113H18|AK035659|2899					AK035659	9530082M04Rik		ILMN_1240114	000360681	S	2707	CTTGAGGTCCAGTACAGTAGAAGGAGAGAGCCAACTCCTGCAAGTTGTCC										
Mus musculus	Riken	ILMN_205315	ILMN_205315	C730013H20RIK	ri|C730013H20|PX00086O20|AK050080|2571					AK050080	C730013H20Rik		ILMN_1253899	000430075	S	760	AGGCGGATGACTGCATCTTCTTCCAGGAATTACAGCAGCTCCCTGAGCCC										
Mus musculus	RefSeq	ILMN_221659	ILMN_221659	GPR56	NM_018882.2	NM_018882.2		14766	31982717	NM_018882.2	Gpr56	NP_061370.2	ILMN_2738618	000060079	S	3214	TTTTAAATACCAGTTCATTTGTCTTTTGATATTAAAGCTCTTTATAGAGA	8	+	97537971-97538020	8qD1	Mus musculus G protein-coupled receptor 56 (Gpr56), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Cyt28; TM7LN4; TM7XN1	Cyt28; TM7LN4; TM7XN1
Mus musculus	Riken	ILMN_202342	ILMN_202342	4833426L05RIK	ri|4833426L05|PX00028A14|AK014775|1646					AK014775	4833426L05Rik		ILMN_2548864	007550133	S	1334	GGCCCTTGATTGCTGGACCCCGATACTTTGATAGCTGGACCTTGGTGGTC										
Mus musculus	RefSeq	ILMN_212524	ILMN_212524	PIGB	NM_018889.2	NM_018889.2		55981	142388124	NM_018889.2	Pigb	NP_061377.1	ILMN_1240218	006760192	S	261	CCTGGTCTTGTTTACCATCGCTCTGCGAATACTTAACTGCTTCTTAGTGC	9	-	72886493-72886542	9qD	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class B (Pigb), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The chemical reactions and pathways involving glycosylphosphatidylinositol anchors, molecular mechanisms for attaching membrane proteins to the lipid bilayer of cell membranes. Structurally they consist of a molecule of phosphatidylinositol to which is linked, via the C-6 hydroxyl of the inositol, a carbohydrate chain. This chain is in turn linked to the protein through an ethanolamine phosphate moiety, the amino group of which is in amide linkage with the C-terminal carboxyl of the protein chain, the phosphate group being esterified to the C-6 hydroxyl of the terminal mannose of the core carbohydrate chain [goid 6505] [evidence ISS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Pig-b	Pig-b
Mus musculus	RefSeq	ILMN_212524	ILMN_212524	PIGB	NM_018889.2	NM_018889.2		55981	142388124	NM_018889.2	Pigb	NP_061377.1	ILMN_1233237	004670068	S	2124	CAAACCAAGCCCTGTTTCATGCACAGACTATTTCATGCCTGGCTTCCTTA	9	-	72863522-72863571	9qD	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class B (Pigb), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The chemical reactions and pathways involving glycosylphosphatidylinositol anchors, molecular mechanisms for attaching membrane proteins to the lipid bilayer of cell membranes. Structurally they consist of a molecule of phosphatidylinositol to which is linked, via the C-6 hydroxyl of the inositol, a carbohydrate chain. This chain is in turn linked to the protein through an ethanolamine phosphate moiety, the amino group of which is in amide linkage with the C-terminal carboxyl of the protein chain, the phosphate group being esterified to the C-6 hydroxyl of the terminal mannose of the core carbohydrate chain [goid 6505] [evidence ISS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Pig-b	Pig-b
Mus musculus	MEEBO	ILMN_184702	ILMN_184702	D630021H01RIK	scl00319914.1_252				51772112	XM_489351	D630021H01Rik		ILMN_1228751	007200551	S	20	AAGTGTTATTGCTGGGAGAGCCAGGTATCTAAAATTAGGTATTTAGGTAG										
Mus musculus	MEEBO	ILMN_184702	ILMN_184702	D630021H01RIK	scl00319914.1_252				51772112	XM_489351	D630021H01Rik		ILMN_2660685	003840382	S	2687	GGGAGGCAAAGCTATGGAGTTTAAGGAGAAATCAGCTAAACCCTTGTTCC										
Mus musculus	RefSeq	ILMN_245760	ILMN_245760	MTHFD2	NM_008638.1	NM_008638.1		17768	6678951	NM_008638.1	Mthfd2	NP_032664.1	ILMN_2878548	005310376	S	1502	GGAAGAGAAAGCAGCACAGGGTTTCAACGGCACTCCCTTACTCTCTCGGG	6	-	83256216-83256265	6qC3	Mus musculus methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase (Mthfd2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP+ = 5,10-methenyltetrahydrofolate + NADPH + H+ [goid 4488] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NAD+ = 5,10-methenyltetrahydrofolate + NADH + H+ [goid 4487] [evidence IEA]; Catalysis of the reaction: 5,10-methenyltetrahydrofolate + H2O = 10-formyltetrahydrofolate [goid 4477] [evidence IEA]	AW558851; NMDMC	AW558851; NMDMC
Mus musculus	RefSeq	ILMN_197385	ILMN_197385	LOC270245	XM_195424.2	XM_195424.2			38075517	XM_195424.2	LOC270245		ILMN_1252928	001980017	S	1551	TGAGGTCCTGGAGGGTGCTCAATCTGAATCTCTTAAGCATGAAGTGCTGG										
Mus musculus	RefSeq	ILMN_212277	ILMN_212277	ENOPH1	NM_026421.2	NM_026421.2		67870	141802985	NM_026421.2	Enoph1	NP_080697.1	ILMN_1233630	006330044	S	1724	ATTTTATAACAGCACTGTTTATTCTGATGCATTCTGATGGGTCAGTGTCG	5	+	100497699-100497748	5qE4	Mus musculus enolase-phosphatase 1 (Enoph1), mRNA.		The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IEA]; The generation of L-methionine (2-amino-4-(methylthio)butanoic acid) from methylthioadenosine [goid 19509] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reactions: 5-(methylthio)-2,3-dioxopentyl phosphate + H2O = 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + phosphate (1a) 5-(methylthio)-2,3-dioxopentyl phosphate = 2-hydroxy-5-(methylthio)-3-oxopent-1-enyl phosphate (1b) 2-hydroxy-5-(methylthio)-3-oxopent-1-enyl phosphate + H2O = 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + phosphate [goid 43874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 2-phosphoglycolate + H2O = glycolate + phosphate [goid 8967] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	BB183658; 2310057D15Rik; C81437	BB183658; 2310057D15Rik; C81437
Mus musculus	RefSeq	ILMN_193902	ILMN_193902	WAS	NM_009515.1	NM_009515.1		22376	6678580	NM_009515.1	Was	NP_033541.1	ILMN_2501489	005340180	S	1820	CTCACAGTCCCTTTTGGCTTTGATCTTGCTTTGTGTGTTTTTATTGAGCC	X	-	7658777-7658826	XqA1.1	Mus musculus Wiskott-Aldrich syndrome homolog (human) (Was), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence IDA]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IDA]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [evidence IDA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IDA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	U42471; Wasp	U42471; Wasp
Mus musculus	RefSeq	ILMN_210272	ILMN_210272	RGL1	NM_016846.3	NM_016846.3		19731	118131206	NM_016846.3	Rgl1	NP_058542.2	ILMN_2603944	004810692	S	180	GTCACCCTCAAAAGAGTCCAGATTCAACAGGCGGCCAATAAAGGAGCGAG	1	-	154470957-154471006	1qG3	Mus musculus ral guanine nucleotide dissociation stimulator,-like 1 (Rgl1), mRNA. XM_924428	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	Rgl; mKIAA0959; KIAA0959	Rgl; mKIAA0959; KIAA0959
Mus musculus	RefSeq	ILMN_210272	ILMN_210272	RGL1	NM_016846.3	NM_016846.3		19731	118131206	NM_016846.3	Rgl1	NP_058542.2	ILMN_2717176	001510020	S	3703	TTGTCTGTAATAACAGTTTCATTCTGTGCTTCCGATCTGCGCTATGCTGG	1	-	154364794-154364843	1qG3	Mus musculus ral guanine nucleotide dissociation stimulator,-like 1 (Rgl1), mRNA. XM_924428	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	Rgl; mKIAA0959; KIAA0959	Rgl; mKIAA0959; KIAA0959
Mus musculus	RefSeq	ILMN_189337	ILMN_247234	LOC319225	XM_993192.1	XM_993192.1		319225	94387529	XM_993192.1	LOC319225	XP_998286.1	ILMN_2460387	003460221	S	2515	GAAGTTATCACAGACTTGATATTGAAGTGTAAACATTAGTGGGCCCTACT					PREDICTED: Mus musculus hypothetical LOC319225 (LOC319225), mRNA.					
Mus musculus	RefSeq	ILMN_191647	ILMN_314613	LOC100040846	XM_001475382.1	XM_001475382.1		100040846	149260682	XM_001475382.1	LOC100040846	XP_001475432.1	ILMN_2480922	000070138	S	520	GCCTCAGACCTCTGCAAATGATAAAGCTTCCATGGGTCAGGTTTGGAGAA	10	+	36870580-36870629	10qB1	PREDICTED: Mus musculus hypothetical protein LOC100040846 (LOC100040846), mRNA.					
Mus musculus	Riken	ILMN_203915	ILMN_203915	NRF1	ri|9830140H09|PX00118N08|AK036604|4046					AK036604	Nrf1		ILMN_1243846	004210240	S	3887	CAGCTGAGAGCAGCGAGCAGTGGGAGGCTTTTGTTGAACCTAGCTTGATG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]		
Mus musculus	MEEBO	ILMN_215317	ILMN_215317	2810471M23RIK	scl0002015.1_328				41281745	NM_145820	2810471M23Rik		ILMN_2772623	001580370	S	2048	GCCTTGGAAATCGCAAAAAAGGTCCCAATCCCAGACCAGTGCACCATTGA										
Mus musculus	Riken	ILMN_202805	ILMN_202805	5930400O15RIK	ri|5930400O15|PX00055E02|AK031063|1551					AK031063	5930400O15Rik		ILMN_1242717	003890050	S	1498	GAGTGCTTATAACCTCATATGAGATGCACTATACCATCCAGTCTCTGGAC										
Mus musculus	RefSeq	ILMN_209875	ILMN_209875	SLC35A5	NM_028756.2	NM_028756.2		74102	31543731	NM_028756.2	Slc35a5	NP_083032.2	ILMN_2600042	004850242	S	3794	TGTGGAAGCCCTGTTGCTTGGGAGGTAGCTATTGTGGCTTTGTTACTGCT	16	-	45059227-45059276	16qB5	Mus musculus solute carrier family 35, member A5 (Slc35a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]	BB097433; D16Ertd450e; 1010001J06Rik; D730043G07Rik; AU021179	BB097433; D16Ertd450e; 1010001J06Rik; D730043G07Rik; AU021179
Mus musculus	RefSeq	ILMN_249242	ILMN_249242	BRE	NM_181280.1	NM_181280.1		107976	41281939	NM_181280.1	Bre	NP_851797.1	ILMN_3139800	004150538	A	1195	TGCCAATGGAAAGCTCTAGGAAACACCAGTGCTGAGAGGCGGCCAACCAG	5	+	32386999-32387017:32387018-32387048	5qB1	Mus musculus brain and reproductive organ-expressed protein (Bre), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IDA]	6030405P19Rik; AI429776; B830038C02Rik	6030405P19Rik; AI429776; B830038C02Rik
Mus musculus	MEEBO	ILMN_192643	ILMN_192643	2610507B11RIK	scl13036.1.1_1				50284698	NM_001002004	2610507B11Rik		ILMN_2489994	000270458	S	9	CATGTAAGCACCTGGCAAGGAAATCGGAAATGGGGAAAGGTCAGCGTCTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]	Catalysis of the reaction: (S)-malate + acceptor = oxaloacetate + reduced acceptor [goid 8924] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192643	ILMN_192643	2610507B11RIK	scl13036.1.1_1				50284698	NM_001002004	2610507B11Rik		ILMN_2775013	006650278	S	7391	ATTTGATGTTGGCCTTTTTTAATTGTATTGAGTAAAAGCGTTCAAGTTGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]	Catalysis of the reaction: (S)-malate + acceptor = oxaloacetate + reduced acceptor [goid 8924] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216089	ILMN_216089	5330431N19RIK	NM_172639.1	NM_172639.1		226162	31541997	NM_172639.1	5330431N19Rik	NP_766227.1	ILMN_2892479	002360187	S	960	GGGAACAGGCTGGGCATCTTGGAACTCCTGTGTGCTGGCTTGCCTTATAC	19	+	45631205-45631254	19qC3	Mus musculus RIKEN cDNA 5330431N19 gene (5330431N19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216089	ILMN_216089	5330431N19RIK	NM_172639.1	NM_172639.1		226162	31541997	NM_172639.1	5330431N19Rik	NP_766227.1	ILMN_2892480	003610010	S	1218	CCCCTGAGGAGGTTCTTGGGGACACAGAGCCATAGTTTTGTCCTTTCCCT	19	+	45631463-45631512	19qC3	Mus musculus RIKEN cDNA 5330431N19 gene (5330431N19Rik), mRNA.					
Mus musculus	MEEBO	ILMN_195064	ILMN_195064	2210406O10RIK	scl26685.3.1_5						2210406O10Rik		ILMN_1247001	007570451	S	1	CCAAGCTGCAGAGATGAGCTACAAAGGACATTCTCAGAGCTGTCAAAAAG										
Mus musculus	RefSeq	ILMN_200397	ILMN_200397	LOC381690	XM_358642.1	XM_358642.1			38081600	XM_358642.1	LOC381690		ILMN_2538614	006250750	S	538	TTAAGACGCACCAGAAGAAGGCATCAGCGGTTGCCACCATGCGGTTTCTG										
Mus musculus	RefSeq	ILMN_210880	ILMN_210880	ABLIM2	NM_177678.6	NM_177678.6		231148	146198543	NM_177678.6	Ablim2	NP_808346.3	ILMN_1250869	006520408	S	1298	AAAGTGGCCGTAGCACCCCGAGTCTCTCAGTGCACTCCGACAGCAGACCT				5qB3	Mus musculus actin-binding LIM protein 2 (Ablim2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C230091L11; AI606905	C230091L11; AI606905
Mus musculus	RefSeq	ILMN_210880	ILMN_210880	ABLIM2	NM_177678.6	NM_177678.6		231148	146198543	NM_177678.6	Ablim2	NP_808346.3	ILMN_2768786	003120296	S	2940	CCCAAGTCGCTAAGAGAAGAGCGCCCCCTGATGGCCAAATCCCTAGAATA				5qB3	Mus musculus actin-binding LIM protein 2 (Ablim2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C230091L11; AI606905	C230091L11; AI606905
Mus musculus	RefSeq	ILMN_198507	ILMN_198507	LOC208414	XM_141606.4	XM_141606.4			38085909	XM_141606.4	LOC208414		ILMN_2531933	001500170	S	1524	AAAGGACAGCAAGGACGTGCGAGTTAGTTGCCCAGTGCCTGGAGAGGACG										
Mus musculus	RefSeq	ILMN_212855	ILMN_212855	BC002199	NM_145964.2	NM_145964.2		211556	109659852	NM_145964.2	BC002199	NP_666076.2	ILMN_1245471	004040520	S	2268	GAGTTCTTGCTGTCCGTGAAAACTTATGTGGGTGGCCCTTTCGATATCTG	3	-	127510255-127510304	3qG2	Mus musculus cDNA sequence BC002199 (BC002199), mRNA.				MGC7434; C78909; AA407621	MGC7434; C78909; AA407621
Mus musculus	RefSeq	ILMN_196823	ILMN_212855	BC002199	NM_145964.2	NM_145964.2		211556	109659852	NM_145964.2	BC002199	NP_666076.2	ILMN_1221467	007200379	S	791	CAGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACC	3	-	127515194-127515243	3qG2	Mus musculus cDNA sequence BC002199 (BC002199), mRNA.				MGC7434; C78909; AA407621	MGC7434; C78909; AA407621
Mus musculus	RefSeq	ILMN_218817	ILMN_218817	4921515J06RIK	NM_025723.2	NM_025723.2		66715	118403307	NM_025723.2	4921515J06Rik	NP_079999.2	ILMN_1218166	002600315	S	1819	TGTACAGTCATAATTCAAGAAATAGTTTGAGAGTTTTAACACAAATTGGG	3	+	108763415-108763464	3qF3	Mus musculus RIKEN cDNA 4921515J06 gene (4921515J06Rik), transcript variant 1, mRNA.				MGC117573	MGC117573
Mus musculus	RefSeq	ILMN_190196	ILMN_190196	WNT16	NM_053116.2	NM_053116.2		93735	31560010	NM_053116.2	Wnt16	NP_444346.2	ILMN_2917629	005270301	S	1351	CCGATGTCCACACGTGTAAGTAACCTCTCCGTCCAGCCTAGCATGAGACG	6	+	22248211-22248232:22248233-22248260	6qA3.1	Mus musculus wingless-related MMTV integration site 16 (Wnt16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	E130309I19Rik	E130309I19Rik
Mus musculus	RefSeq	ILMN_214073	ILMN_214073	H47	NM_024439.3	NM_024439.3		109815	111119009	NM_024439.3	H47	NP_077759.3	ILMN_2712557	007100520	S	705	GCACACTTTCACAGTGACTGGCCAAGGAGAGGTGGGGCTTTTCTCTGTTC	7	+	73233805-73233854	7qC	Mus musculus histocompatibility 47 (H47), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [evidence IMP]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	H-47; 1500011E07Rik; H-4; Vimp; C78786; H4; Sels	H-47; 1500011E07Rik; H-4; Vimp; C78786; H4; Sels
Mus musculus	RefSeq	ILMN_214073	ILMN_214073	H47	NM_024439.3	NM_024439.3		109815	111119009	NM_024439.3	H47	NP_077759.3	ILMN_1214090	007380553	S	774	GGGCTTTGGTCAGCATGAGATATAGACATTGCCATTAGGCCACACTCTAG	7	+	73233874-73233923	7qC	Mus musculus histocompatibility 47 (H47), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [evidence IMP]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	H-47; 1500011E07Rik; H-4; Vimp; C78786; H4; Sels	H-47; 1500011E07Rik; H-4; Vimp; C78786; H4; Sels
Mus musculus	MEEBO	ILMN_188288	ILMN_188288	D030017L14RIK	scl0099047.1_137						D030017L14Rik		ILMN_2451400	004880364	S	14	AGAACAGTGCCATAGTCTGAATCTCTAGCGGCTTTAAGTGCCATGCAGAT										
Mus musculus	RefSeq	ILMN_200699	ILMN_200699	LOC384493	XM_358743.1	XM_358743.1			38085286	XM_358743.1	LOC384493		ILMN_1231484	005220014	S	858	GCACTGCAGGCTTGCTCACTGGTACTATAGGAAGATGGCGTGGACCCAGC										
Mus musculus	MEEBO	ILMN_210876	ILMN_210876	FGD4	scl0001805.1_21				29336046	NM_139232	Fgd4		ILMN_2610084	004830324	S	2389	ATACCCCTCCTGGGCTACGTTGTGGATGATATGCCTAAGAGTGCAGATCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; Formation of a microspike, a thin, stiff projection extended from the surface of a migrating cell [goid 30035] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence ISO]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]		
Mus musculus	RefSeq	ILMN_214768	ILMN_214768	DTX4	NM_172442.2	NM_172442.2		207521	40254206	NM_172442.2	Dtx4	NP_766030.2	ILMN_2922334	000130102	S	4794	CCCGGGGTGAACAAATGGGATTGGAGACACAGCTATGAGATGCTTATCCC	19	-	12541210-12541259	19qA	Mus musculus deltex 4 homolog (Drosophila) (Dtx4), mRNA. XM_001000490	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D930042H13; AI449438; BC044798; RNF155	D930042H13; AI449438; BC044798; RNF155
Mus musculus	RefSeq	ILMN_214768	ILMN_214768	DTX4	NM_172442.2	NM_172442.2		207521	40254206	NM_172442.2	Dtx4	NP_766030.2	ILMN_2651706	001300300	S	4648	AGATTAGGCCCTGGACACAAGCGACTTTGACCCAGAGTGCTTCCCCAGAG	19	-	12541356-12541405	19qA	Mus musculus deltex 4 homolog (Drosophila) (Dtx4), mRNA. XM_001000490	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D930042H13; AI449438; BC044798; RNF155	D930042H13; AI449438; BC044798; RNF155
Mus musculus	MEEBO	ILMN_222366	ILMN_222366	CRBN	scl0001034.1_561	NM_021449.1			10946825	NM_021449.1	Crbn		ILMN_1238287	003290246	S	2184	GGAATCTTACACAATATAGCAGCTTTGATGTCACTCCATCTGTGCAGATG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223529	ILMN_223529	RBMXRT	NM_009033.2	NM_009033.2		19656	83699419	NM_009033.2	Rbmxrt	NP_033059.2	ILMN_2765245	006020026	S	1503	GTCTTCTGTCATAACTACCCAAGGACTACTAAAAGAAAAGTTGTGTTACC	8	-	81029340-81029389	8qC1	Mus musculus RNA binding motif protein, X chromosome retrogene (Rbmxrt), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC102184; Hnrpg	MGC102184; Hnrpg
Mus musculus	RefSeq	ILMN_210298	ILMN_210298	4930511M11RIK	NM_029141.3	NM_029141.3		75010	146141205	NM_029141.3	4930511M11Rik	NP_083417.1	ILMN_2604216	002060041	S	1428	CTGTATGTCAAAAGAAGCTAAGAATTCAGTAGATGGTAGCTGTAGCTGTT				5qA1	Mus musculus RIKEN cDNA 4930511M11 gene (4930511M11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4930403J02Rik; 4930500J03Rik	4930403J02Rik; 4930500J03Rik
Mus musculus	RefSeq	ILMN_221679	ILMN_249277	2410187C16RIK	NM_029734.1	NM_029734.1		76773	58037458	NM_029734.1	2410187C16Rik	NP_084010.1	ILMN_2738921	006940239	S	599	CGACTTCATCAGCATGGACCCTGCAGTAGGATGGGGAGCTGTCTACACGC	15	+	57989484-57989533	15qD1	Mus musculus RIKEN cDNA 2410187C16 gene (2410187C16Rik), mRNA.				AW550036; AU014961	AW550036; AU014961
Mus musculus	RefSeq	ILMN_217018	ILMN_217018	RTN4RL2	NM_199223.1	NM_199223.1		269295	40363806	NM_199223.1	Rtn4rl2	NP_954693.1	ILMN_2678199	004860554	S	667	TTCCACGGCCTCAGCCGCCTCACCATCCTCTACCTGTTCAACAACAGCCT	2	-	84712649-84712698	2qD	Mus musculus reticulon 4 receptor-like 2 (Rtn4rl2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The regrowth of axons following their loss or damage [goid 31103] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ngrl3; Ngrh1; Ngr2	Ngrl3; Ngrh1; Ngr2
Mus musculus	RefSeq	ILMN_220315	ILMN_220315	NANOS3	NM_194059.2	NM_194059.2		244551	118130762	NM_194059.2	Nanos3	NP_918948.1	ILMN_2720493	000540619	S	384	CACCACCCGGAATTCTGCAGGCAAAAAGCTGACCCGGCCTGACAAGGCAA	8	-	86700018-86700067	8qC3	Mus musculus nanos homolog 3 (Drosophila) (Nanos3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC141148; nos3	MGC141148; nos3
Mus musculus	RefSeq	ILMN_226605	ILMN_226605	XPO1	NM_001035226.1	NM_001035226.1		103573	78190506	NM_001035226.1	Xpo1	NP_001030303.1	ILMN_3123321	000150424	A	4758	GGCAGGCATCACCTCTGCCCAGCAGGATCTCAAGTTTTCTAAGAGATTGG	11	+	23197449-23197498	11qA3.2	Mus musculus exportin 1, CRM1 homolog (yeast) (Xpo1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IDA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IMP]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA420417; Crm1	AA420417; Crm1
Mus musculus	RefSeq	ILMN_191713	ILMN_226605	XPO1	NM_001035226.1	NM_001035226.1		103573	78190506	NM_001035226.1	Xpo1	NP_001030303.1	ILMN_2481528	003460091	S	4590	AGCTTTGTGCCAAAGTCTTATAATCCCATCAGAGTCTGGTGGATCTCGAG	11	+	23197281-23197330	11qA3.2	Mus musculus exportin 1, CRM1 homolog (yeast) (Xpo1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IDA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IMP]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA420417; Crm1	AA420417; Crm1
Mus musculus	RefSeq	ILMN_206453	ILMN_253535	EG434008	NM_001004182.2	NM_001004182.2		434008	141801946	NM_001004182.2	EG434008	NP_001004182.1	ILMN_1244998	005670379	S	2846	GCCCTGGTCAGATTCTACAGCAGACCTTGCATGTGAGCGCCCGGAGTGTA	6	+	40198106-40198155	6qB1	Mus musculus predicted gene, EG434008 (EG434008), mRNA.					
Mus musculus	Riken	ILMN_206678	ILMN_206678	HARS	ri|5730408P20|PX00314I08|AK077437|704					AK077437	Hars		ILMN_1251489	005960544	S	458	GGCACTCACTGGAGTTGAACTTGGTTTTAGGGACAGCAGGCACAGGTAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6427] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His) [goid 4821] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186582	ILMN_186582	20198505_5605	20198505_5605						20198505_5605		ILMN_2436736	001260242	S	15	ATGCCCTGCATCGTCTGCGTGGGGTCGCCGACCCAGACCGAGGCGCTGGA										
Mus musculus	Riken	ILMN_204638	ILMN_204638	E130208E03RIK	ri|E130208E03|PX00092H16|AK053696|2356					AK053696	E130208E03Rik		ILMN_1256395	000050092	S	1880	CACATATGCTCCCAGAACAATTTAAGGATTAGGGACGCTCCCATACTGCC										
Mus musculus	RefSeq	ILMN_211299	ILMN_211299	SLC45A2	NM_053077.3	NM_053077.3		22293	141803377	NM_053077.3	Slc45a2	NP_444307.1	ILMN_2614421	004260605	S	2572	GTGAAGTGCTTCCCCTTACCGCAAAGTCTTAGCCTTCCTCGATACAGCAA	15	+	10958577-10958626	15qA1	Mus musculus solute carrier family 45, member 2 (Slc45a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]		uw; Aim-1; Aim1; bls; blanc-sale; Dbr; Matp	uw; Aim-1; Aim1; bls; blanc-sale; Dbr; Matp
Mus musculus	RefSeq	ILMN_211299	ILMN_211299	SLC45A2	NM_053077.3	NM_053077.3		22293	141803377	NM_053077.3	Slc45a2	NP_444307.1	ILMN_2616618	007330270	S	532	ATGGTAGGTGTGGTTCTCTTCGATTTTTCTGCTGACTTCATTGACGGGCC	15	+	10932633-10932682	15qA1	Mus musculus solute carrier family 45, member 2 (Slc45a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]		uw; Aim-1; Aim1; bls; blanc-sale; Dbr; Matp	uw; Aim-1; Aim1; bls; blanc-sale; Dbr; Matp
Mus musculus	RefSeq	ILMN_211299	ILMN_211299	SLC45A2	NM_053077.3	NM_053077.3		22293	141803377	NM_053077.3	Slc45a2	NP_444307.1	ILMN_2746802	001570110	S	859	CCTCAGGGCTCGTCGCTGTCAGCCAGTGGGATGCATGAATACGGTTCTAT	15	+	10942430-10942479	15qA1	Mus musculus solute carrier family 45, member 2 (Slc45a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]		uw; Aim-1; Aim1; bls; blanc-sale; Dbr; Matp	uw; Aim-1; Aim1; bls; blanc-sale; Dbr; Matp
Mus musculus	Riken	ILMN_203759	ILMN_203759	A130030M01RIK	ri|A130030M01|PX00122E15|AK037631|2587					AK037631	A130030M01Rik		ILMN_1226732	003360097	S	2262	TTGCCCGCTGGGCCGCTGCCTCCAGGATAAAAGCTAAGGACTAATCCCTG										
Mus musculus	RefSeq	ILMN_199742	ILMN_324423	LOC100043308	XM_001479692.1	XM_001479692.1		100043308	149265715	XM_001479692.1	LOC100043308	XP_001479742.1	ILMN_1234304	004760017	S	43	TGTTTTTACTTCTAGGTCTTCACCTAGCTGGGGTGAGTGGCCAGCAGGAG	14	+	53989774-53989803:53989942-53989961	14qC2	PREDICTED: Mus musculus similar to TCR V alpha chain (LOC100043308), mRNA.					
Mus musculus	MEEBO	ILMN_192364	ILMN_192364	B230206N24RIK	scl28540.6.1_0				27369661	NM_172487	B230206N24Rik		ILMN_2725161	001500215	S	1854	CATGTGCCCTCACCATGACCCAATGACTGTGGCAGGTGCTATTATCGCCA										
Mus musculus	RefSeq	ILMN_216240	ILMN_216240	PLDN	NM_019788.3	NM_019788.3		18457	110578650	NM_019788.3	Pldn	NP_062762.1	ILMN_1243525	006660725	S	1833	CGGGGCGATAGAGAGATCGATAAAGAGGACCAGTGCTCAGAACCTGTAGC	2	+	122573562-122573611	2qE5	Mus musculus pallidin (Pldn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The joining of two lipid bilayers to form a single membrane [goid 6944] [evidence IPI]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence TAS]; Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [evidence TAS]		pa; Stx13bp1	pa; Stx13bp1
Mus musculus	RefSeq	ILMN_209074	ILMN_209074	ANKRD22	NM_024204.4	NM_024204.4		52024	48597000	NM_024204.4	Ankrd22	NP_077166.4	ILMN_2965414	002320445	S	808	TCCCAGATTGCACTAATGCTAAAGAGAGCCTCCTAGACCTGTGACTTCTC	19	-	34189442-34189457:34189458-34189491	19qC1	Mus musculus ankyrin repeat domain 22 (Ankrd22), mRNA.				D19Ertd675e; 5430429D21Rik	D19Ertd675e; 5430429D21Rik
Mus musculus	RefSeq	ILMN_212113	ILMN_212113	CRYZ	NM_009968.1	NM_009968.1		12972	33859529	NM_009968.1	Cryz	NP_034098.1	ILMN_1232686	004760112	S	1643	AAGCCTCTGGAAAGCTTCGGCAAAAATGAGCAATACTTGGGAGACCTCCC	3	+	154285770-154285819	3qH4	Mus musculus crystallin, zeta (Cryz), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + quinone = NADP+ + semiquinone [goid 3960] [evidence IEA]	Sez9	Sez9
Mus musculus	RefSeq	ILMN_212113	ILMN_212113	CRYZ	NM_009968.1	NM_009968.1		12972	33859529	NM_009968.1	Cryz	NP_034098.1	ILMN_2637792	007380246	S	389	GCACCGTCTCTGGTGGCTACGCGGAATTTGCTCTTGCAGCCGATGACACT	3	+	154274399-154274448	3qH4	Mus musculus crystallin, zeta (Cryz), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + quinone = NADP+ + semiquinone [goid 3960] [evidence IEA]	Sez9	Sez9
Mus musculus	RefSeq	ILMN_212113	ILMN_212113	CRYZ	NM_009968.1	NM_009968.1		12972	33859529	NM_009968.1	Cryz	NP_034098.1	ILMN_1217341	001240025	S	734	CTGTTGGTGACAAGGACAAGGGGGTTGATGTGATTATTGAGATGCTGGCG	3	+	154284449-154284498	3qH4	Mus musculus crystallin, zeta (Cryz), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + quinone = NADP+ + semiquinone [goid 3960] [evidence IEA]	Sez9	Sez9
Mus musculus	RefSeq	ILMN_212113	ILMN_212113	CRYZ	NM_009968.1	NM_009968.1		12972	33859529	NM_009968.1	Cryz	NP_034098.1	ILMN_2965093	000990594	S	1570	ATGGCTGTCTTGGGCCCTGAAGACTTTCTGGGCTGAAAAATATCCTTTTA	3	+	154285697-154285746	3qH4	Mus musculus crystallin, zeta (Cryz), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + quinone = NADP+ + semiquinone [goid 3960] [evidence IEA]	Sez9	Sez9
Mus musculus	MEEBO	ILMN_185449	ILMN_185449	A930037O16RIK	scl29227.2_493						A930037O16Rik		ILMN_1230968	005220468	S	1	CCCTTTCCTAACTTATCAGCTTTTGGGGGATAGTGAGAAATTGATGCTGT										
Mus musculus	RefSeq	ILMN_196795	ILMN_196795	LOC214444	XM_143838.1	XM_143838.1			20833855	XM_143838.1	LOC214444		ILMN_1234193	005080521	S	2726	ACGCAGTTTTTCATATCCCCAGTCCTCTACTGCACACTCCGCAAGCCTCC										
Mus musculus	RefSeq	ILMN_217532	ILMN_221762	4930534B04RIK	NM_181815.2	NM_181815.2		75216	64085215	NM_181815.2	4930534B04Rik	NP_861536.2	ILMN_2684378	002900743	S	3913	TGCCAAGTGTGGACTAGCATGATGTTATAGGCAGTCTTTGTGAGTGAGAA	12	-	92237809-92237858	12qD3	Mus musculus RIKEN cDNA 4930534B04 gene (4930534B04Rik), mRNA.				AI480494; E230024F20; AI449708; 5430424K18Rik	AI480494; E230024F20; AI449708; 5430424K18Rik
Mus musculus	RefSeq	ILMN_205253	ILMN_221762	4930534B04RIK	NM_181815.2	NM_181815.2		75216	64085215	NM_181815.2	4930534B04Rik	NP_861536.2	ILMN_1238463	007320079	S	2327	GAGATGCAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGATCTCGC	12	-	92498693-92498742	12qD3	Mus musculus RIKEN cDNA 4930534B04 gene (4930534B04Rik), mRNA.				AI480494; E230024F20; AI449708; 5430424K18Rik	AI480494; E230024F20; AI449708; 5430424K18Rik
Mus musculus	RefSeq	ILMN_219180	ILMN_219180	POM121	NM_148932.1	NM_148932.1		107939	22507336	NM_148932.1	Pom121	NP_683734.1	ILMN_1232596	007210280	S	5443	CCACAGACTGAGTTCCTGTGAGTGTAGCTGAGATTTTTAGTATGAATGTG	5	-	135852059-135852108	5qG2	Mus musculus nuclear pore membrane protein 121 (Pom121), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		mKIAA0618; 2610027A18Rik; C80273	mKIAA0618; 2610027A18Rik; C80273
Mus musculus	MEEBO	ILMN_189260	ILMN_189260	2510010K19RIK	scl41527.1.1_4						2510010K19Rik		ILMN_2459720	006290193	S	2	TGACAGTTGGGCGCCATGCGCCGTGCCAGGACTGTTCGCAGCGCTCGCCG										
Mus musculus	RefSeq	ILMN_196751	ILMN_196751	H2-Q7	NM_010394.2	NM_010394.2		15018	66955876	NM_010394.2	H2-Q7	NP_034524.2	ILMN_2924419	006940386	S	878	TACCCTGAGATGGGGGAGATGGGAGCCTCCTCCATACACTGTCTCCAACA	17	+	35050582-35050604:35050731-35050757	17qB1	Mus musculus histocompatibility 2, Q region locus 7 (H2-Q7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]		Ped; Qa-7; Q9; Qa7; Qa-2; H-2Q7	Ped; Qa-7; Q9; Qa7; Qa-2; H-2Q7
Mus musculus	RefSeq	ILMN_248785	ILMN_248785	OLFR1085	NM_146590.1	NM_146590.1		258583	22129470	NM_146590.1	Olfr1085	NP_666801.1	ILMN_2880812	002450156	S	66	GCTGCAGGCCCCACTCTTTGGGCTGCTCTTCATTATCTATCTGATCTCAG	2	-	86498498-86498547	2qD	Mus musculus olfactory receptor 1085 (Olfr1085), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR191-1	MOR191-1
Mus musculus	RefSeq	ILMN_211801	ILMN_211801	8430410K20RIK	NM_145609.1	NM_145609.1		78100	21704217	NM_145609.1	8430410K20Rik	NP_663584.1	ILMN_1232530	002570494	S	2429	GGGCAGACTTCGCCTGCTGATTTGCCCACAGTGTCCTGATTGTGGTTTAT	9	+	4386549-4386598	9qA1	Mus musculus RIKEN cDNA 8430410K20 gene (8430410K20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_184666	ILMN_184666	WDR31	NM_023597.1	NM_023597.1		71354	12963744	NM_023597.1	Wdr31	NP_076086.1	ILMN_1258609	000580403	S	1172	GCTGTTGGTGACATCTCCTCCTTGTTATGCGCAAGTTTCTACAGAGGAGT	4	-	62114871-62114920	4qB3	Mus musculus WD repeat domain 31 (Wdr31), mRNA.				spWD; 5430402I10Rik	spWD; 5430402I10Rik
Mus musculus	RefSeq	ILMN_184666	ILMN_184666	WDR31	NM_023597.1	NM_023597.1		71354	12963744	NM_023597.1	Wdr31	NP_076086.1	ILMN_2842654	005130082	S	1085	GACTCCAAGGTGAAGATTTGGAACCAGGATACTGGAGCTTGCCTCTCCAC	4	-	62114958-62114971:62116845-62116880	4qB3	Mus musculus WD repeat domain 31 (Wdr31), mRNA.				spWD; 5430402I10Rik	spWD; 5430402I10Rik
Mus musculus	RefSeq	ILMN_184666	ILMN_184666	WDR31	NM_023597.1	NM_023597.1		71354	12963744	NM_023597.1	Wdr31	NP_076086.1	ILMN_2449539	002340338	S	452	ACTGGGCGTATGGTGAAAAGGTTCACAGGGCACGAGCGGGAAATCACGAA	4	-	62123175-62123224	4qB3	Mus musculus WD repeat domain 31 (Wdr31), mRNA.				spWD; 5430402I10Rik	spWD; 5430402I10Rik
Mus musculus	RefSeq	ILMN_227592	ILMN_227592	MMS19L	NM_028152.2	NM_028152.2		72199	31980727	NM_028152.2	Mms19l	NP_082428.1	ILMN_2949549	005900632	S	3510	AGCACACACCGAGAGCTCCCAGTTCTTCAGTACAGCACCGAGGCACAGAG	19	-	41997423-41997472	19qC3	Mus musculus MMS19 (MET18 S. cerevisiae)-like (Mms19l), mRNA.				Mms19; C86341; C79368; 2410001K24Rik; AI316855; 2610042O15Rik	Mms19; C86341; C79368; 2410001K24Rik; AI316855; 2610042O15Rik
Mus musculus	RefSeq	ILMN_213642	ILMN_213642	SERPINF1	NM_011340.3	NM_011340.3		20317	117606334	NM_011340.3	Serpinf1	NP_035470.3	ILMN_2639239	002490575	S	1437	CCAGGAAGGCGGCCGGTAGCTTCAGTGTAGCCTCTGCAATAAAAGAGCTT	11	-	75223538-75223587	11qB5	Mus musculus serine (or cysteine) peptidase inhibitor, clade F, member 1 (Serpinf1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IDA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Sdf3; AI195227; Pedfl; EPC-1; Pedf	Sdf3; AI195227; Pedfl; EPC-1; Pedf
Mus musculus	RefSeq	ILMN_201134	ILMN_201134	LOC382024	XM_356094.1	XM_356094.1			38089346	XM_356094.1	LOC382024		ILMN_1253809	000450139	S	65	TTCAGTGCTAAGGAGCTCCGCCTGCGGAAGGGAGCAGCAGACCCCTCAGA										
Mus musculus	RefSeq	ILMN_191563	ILMN_191563	V1RD11	NM_207544.1	NM_207544.1		404285	46430540	NM_207544.1	V1rd11	NP_997427.1	ILMN_1220428	007040528	S	835	CATCTAAGCTTCCCCACTGTTTCTCCCTTCCTGTTGATTTGTAGGGATCC	7	-	5835260-5835309	7qA1	Mus musculus vomeronasal 1 receptor, D11 (V1rd11), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_205129	ILMN_205129	CAPN2	ri|E130314B09|PX00209I15|AK053832|3018					AK053832	Capn2		ILMN_1235077	000010673	S	2830	GCCAAAATAAAGACGCCAGCTCAGCCAGACTTAGCAGTAGCTGACCCGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216992	ILMN_239145	TANC1	NM_198294.2	NM_198294.2		66860	57164406	NM_198294.2	Tanc1	NP_938036.2	ILMN_2677882	004730632	S	7359	GACAGTCTTACTCTTTCGTTATGTAGTTTGTTTCTGCACAACTACTGTAC	2	+	59683692-59683741	2qC1.1	Mus musculus tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 (Tanc1), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	mKIAA1728; 1200003E16Rik; Tanc	mKIAA1728; 1200003E16Rik; Tanc
Mus musculus	RefSeq	ILMN_193234	ILMN_193234	TNFRSF25	NM_033042.3	NM_033042.3		85030	114145578	NM_033042.3	Tnfrsf25	NP_149031.2	ILMN_2510383	006370520	S	1333	GGAAGGTCCATCAGCCACTTTGACACCCTAGTGACCCTTGAAGGAGCCTT	4	+	151493950-151493999	4qE2	Mus musculus tumor necrosis factor receptor superfamily, member 25 (Tnfrsf25), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	WSL-LR; Tnfrsf12; LARD; WSL-1; APO-3; TR3; DDR3; TRAMP; DR3; Wsl	WSL-LR; Tnfrsf12; LARD; WSL-1; APO-3; TR3; DDR3; TRAMP; DR3; Wsl
Mus musculus	RefSeq	ILMN_193234	ILMN_193234	TNFRSF25	NM_033042.3	NM_033042.3		85030	114145578	NM_033042.3	Tnfrsf25	NP_149031.2	ILMN_1248617	003190463	S	445	CGGACACCTTCTTGACCAGAGACAACCACTTTAAGACTGACTGTACCCGC	4	+	151491103-151491152	4qE2	Mus musculus tumor necrosis factor receptor superfamily, member 25 (Tnfrsf25), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	WSL-LR; Tnfrsf12; LARD; WSL-1; APO-3; TR3; DDR3; TRAMP; DR3; Wsl	WSL-LR; Tnfrsf12; LARD; WSL-1; APO-3; TR3; DDR3; TRAMP; DR3; Wsl
Mus musculus	RefSeq	ILMN_200911	ILMN_200911	LOC382256	XM_356368.1	XM_356368.1			38086978	XM_356368.1	LOC382256		ILMN_2540434	007380494	S	271	CCAGGTACCACCCTATGGATGGGAGATGATGACAAACCGAGATGGACGTG										
Mus musculus	RefSeq	ILMN_196144	ILMN_196144	TUSC2	NM_019742.2	NM_019742.2		80385	31980989	NM_019742.2	Tusc2	NP_062716.1	ILMN_2834451	004060438	S	1300	TGGTAAGAAACGACTGGGGCTGGTGCCAGTAGCTATGAGGAGCCCATCCC	9	+	107423848-107423897	9qF1	Mus musculus tumor suppressor candidate 2 (Tusc2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA407686; Lgcc; Fus1; 1190001E22Rik; PAP; Pdap2	AA407686; Lgcc; Fus1; 1190001E22Rik; PAP; Pdap2
Mus musculus	RefSeq	ILMN_216748	ILMN_216748	4930418G15RIK	NM_027033.3	NM_027033.3		69312	146141165	NM_027033.3	4930418G15Rik	NP_081309.1	ILMN_2674820	005130551	S	720	AAAGTATTTACATGAAATTGTGGCTTTACAATATACTTTGACATATTTAT				1qA2	Mus musculus RIKEN cDNA 4930418G15 gene (4930418G15Rik), transcript variant 1, mRNA.				1700011J18Rik	1700011J18Rik
Mus musculus	RefSeq	ILMN_218545	ILMN_218545	OLFR15	NM_008762.2	NM_008762.2		18312	116174769	NM_008762.2	Olfr15	NP_032788.2	ILMN_2697137	000580181	S	663	TGCTCAGGCAGTGATGAAGATCCGCTCTGTGGAGGGACGTCGAAAGGCTT	16	+	3839637-3839686	16qA1	Mus musculus olfactory receptor 15 (Olfr15), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-17; OR3	MOR256-17; OR3
Mus musculus	RefSeq	ILMN_211382	ILMN_211382	MYOZ1	NM_021508.3	NM_021508.3		59011	134032009	NM_021508.3	Myoz1	NP_067483.1	ILMN_2615250	000870601	S	946	GAGCTCTGGGGAGCATGTAGACTACAACGTGGATGTTGGTATCCCCTTGG	14	-	21468622-21468671	14qA3	Mus musculus myozenin 1 (Myoz1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IPI]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Myoz; AV090278; FATZ; 2310001N11Rik	Myoz; AV090278; FATZ; 2310001N11Rik
Mus musculus	RefSeq	ILMN_218491	ILMN_218491	ARL6IP1	NM_019419.1	NM_019419.1		54208	45433589	NM_019419.1	Arl6ip1	NP_062292.1	ILMN_1253348	004280072	S	1774	GTGGATCCATGCACTGATGCTGTGAAGCCTGCCCCTGTGTGTATCTGTTC	7	-	125262653-125262702	7qF2	Mus musculus ADP-ribosylation factor-like 6 interacting protein 1 (Arl6ip1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A translocation complex that constitutes the specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. Composed of a heterotetramer of alpha, beta, gamma and delta subunits (translocon-associated proteins or TRAPs). In yeast it is a heterotrimeric complex consisting of Sec61p, Sbh1p, and Sss1p. The Sec61 complex functions in cotranslational and posttranslational translocation events [goid 5784] [evidence IPI]	The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria [goid 6613] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU042858; C85138; mKIAA0069; Aip-1; AL022945; ARMER; Arl6ip; AIP-6	AU042858; C85138; mKIAA0069; Aip-1; AL022945; ARMER; Arl6ip; AIP-6
Mus musculus	RefSeq	ILMN_253346	ILMN_253346	FAM159B	NM_029984.1	NM_029984.1		77803	58037508	NM_029984.1	Fam159b	NP_084260.1	ILMN_3048751	000110632	I	111	TGGGCTTGGGACGAGCGCAGTCCGAGCACACATCGCACGCACCTCGGGAT	13	-	105653813-105653862	13qD1	Mus musculus family with sequence similarity 159, member B (Fam159b), mRNA.					
Mus musculus	RefSeq	ILMN_253346	ILMN_253346	FAM159B	NM_029984.1	NM_029984.1		77803	58037508	NM_029984.1	Fam159b	NP_084260.1	ILMN_3124611	001990168	A	1203	CCGGGAAAGCAAACCTGGTGGCGGGTCTTGTCTCAAGTCTCTTAGAAATC	13	-	105635420-105635469	13qD1	Mus musculus family with sequence similarity 159, member B (Fam159b), mRNA.					
Mus musculus	RefSeq	ILMN_223143	ILMN_253346	FAM159B	NM_029984.1	NM_029984.1		77803	58037508	NM_029984.1	Fam159b	NP_084260.1	ILMN_1213789	000070554	S	647	TTGCCTGTTAGTTAAAATCCCTGTTTTGAAAGTTTATCTGAGAGAGGGAG	13	-	105635976-105636015:105636016-105636025	13qD1	Mus musculus family with sequence similarity 159, member B (Fam159b), mRNA.					
Mus musculus	RefSeq	ILMN_212633	ILMN_212633	MRPL49	NM_026246.3	NM_026246.3		18120	146134991	NM_026246.3	Mrpl49	NP_080522.1	ILMN_2701363	006380603	S	125	GCTTTGTGGAGTCTGTGGATGAATACCAATTTGTGGAGCGCCTGCTCCCC				19qA	Mus musculus mitochondrial ribosomal protein L49 (Mrpl49), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	Nof1; 4833419D18Rik	Nof1; 4833419D18Rik
Mus musculus	RefSeq	ILMN_212633	ILMN_212633	MRPL49	NM_026246.3	NM_026246.3		18120	146134991	NM_026246.3	Mrpl49	NP_080522.1	ILMN_2628672	003780435	S	145	GAATACCAATTTGTGGAGCGCCTGCTCCCCCCTACCAAAATCCCAGAGCC				19qA	Mus musculus mitochondrial ribosomal protein L49 (Mrpl49), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	Nof1; 4833419D18Rik	Nof1; 4833419D18Rik
Mus musculus	RefSeq	ILMN_212633	ILMN_212633	MRPL49	NM_026246.3	NM_026246.3		18120	146134991	NM_026246.3	Mrpl49	NP_080522.1	ILMN_2634295	005690167	S	1399	CTGGCGCCCACCTCACCAGCCACATGTCCAACCCACCATTAAACTGGCTA				19qA	Mus musculus mitochondrial ribosomal protein L49 (Mrpl49), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	Nof1; 4833419D18Rik	Nof1; 4833419D18Rik
Mus musculus	MEEBO	ILMN_222545	ILMN_222545	LOC384402	IGKV14-130_AJ231241_Ig_kappa_variable_14-130_114	XM_357623.1			38084295	XM_357623.1	LOC384402		ILMN_2751221	004640725	S	133	GCCAGGCAACTCAAGACATTGTTAAGAATTTAAACTGGTATCAGCAGAAA										
Mus musculus	RefSeq	ILMN_199098	ILMN_227963	EG626858	XM_891465.2	XM_891465.2		626858	149260990	XM_891465.2	EG626858	XP_896558.2	ILMN_1254545	002360538	S	1306	CCATGGTAACGTCTTCAGCAGGTGGCAGGTATGTGTCATCTTCCAAAAGG	10	-	85172162-85172211	10qC1	PREDICTED: Mus musculus predicted gene, EG626858 (EG626858), mRNA.					
Mus musculus	Riken	ILMN_204998	ILMN_204998	9530022L21RIK	ri|9530022L21|PX00112A17|AK035357|1576					AK035357	9530022L21Rik		ILMN_1243930	001940484	S	1350	GTCTTACTGTGCTCTGGGTTTTTAACTAGTCCTCGTAGCCAGCTGTGGCC										
Mus musculus	RefSeq	ILMN_232509	ILMN_232509	GAL3ST4	NM_001033416.1	NM_001033416.1		330217	84370026	NM_001033416.1	Gal3st4	NP_001028588.1	ILMN_2881155	006330068	S	3009	CCCTGGAGGGGCAAAAGATGACAGCGACACAGAGAAAGTTTGGGGCATGA	5	-	138494816-138494865	5qG2	Mus musculus galactose-3-O-sulfotransferase 4 (Gal3st4), mRNA. XM_925485 XM_925486 XM_925488	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: N-acetyllactosamine + 3'-phosphoadenosine 5'-phosphosulfate = 3-sulfo-N-acetyllactosamine + adenosine 3',5'-bisphosphate. N-acetyllactosamine residues are found in a number of different carbohydrate types. N-acetyllactosamine can also be written as Gal-beta-(1,4)-GlcNAc [goid 50694] [evidence ISO]	1500031A01Rik	1500031A01Rik
Mus musculus	RefSeq	ILMN_211476	ILMN_311589	LOC100039571	XM_001473215.1	XM_001473215.1		100039571	149260642	XM_001473215.1	LOC100039571	XP_001473265.1	ILMN_1236631	007200097	S	129	AAGAAGATCCGAACGTCACCCACCTTCCGGCGGCCCAAGACCCTGCGGCT	10	+	14242995-14243044	10qA2	PREDICTED: Mus musculus similar to ribosomal protein L23a (LOC100039571), mRNA.					
Mus musculus	RefSeq	ILMN_213900	ILMN_213900	CLTB	NM_028870.1	NM_028870.1		74325	30794163	NM_028870.1	Cltb	NP_083146.1	ILMN_2791059	006520403	S	1145	GCTCTCTGTGATTCTTTAACAAGTCTGAAGGTAGGGACTCTGCTGTCCTC	13	-	54602942-54602991	13qB1	Mus musculus clathrin, light polypeptide (Lcb) (Cltb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex [goid 30132] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310046E19Rik	2310046E19Rik
Mus musculus	RefSeq	ILMN_192240	ILMN_256989	ETL4	NM_001081006.1	NM_001081006.1		208618	124486587	NM_001081006.1	Etl4	NP_001074475.1	ILMN_1259022	000050577	S	7291	CCACAGGGTTTCAGCTCTGAGGGCATTCTAAGCAACGTGTAATCACATCC	2	+	20730903-20730952	2qA3	Mus musculus enhancer trap locus 4 (Etl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]		6620402G01Rik; BC026657; 9430077C05Rik; Etl-4; Skt; E330027G05Rik	6620402G01Rik; BC026657; 9430077C05Rik; Etl-4; Skt; E330027G05Rik
Mus musculus	RefSeq	ILMN_219115	ILMN_219115	FOXI2	NM_183193.1	NM_183193.1		270004	34147249	NM_183193.1	Foxi2	NP_899016.1	ILMN_2894125	006520014	S	2472	CGTCAGGGCTTCCACAAAGTTGGATACATCCAGGTGTCTTGGCTGTGTGG	7	+	135251839-135251888	7qF3	Mus musculus forkhead box I2 (Foxi2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	B130055A05Rik	B130055A05Rik
Mus musculus	MEEBO	ILMN_209904	ILMN_209904	C1QDC1	scl0001106.1_64	XM_132976.3			25050384	XM_132976.3	C1qdc1		ILMN_2618109	006940170	S	770	GACCAGATGGAGCAGTCATCCTTGTACTTTTGGGACCTTTTGGAAGGTAG										
Mus musculus	Riken	ILMN_206665	ILMN_206665	A630064D23RIK	ri|A630064D23|PX00146O24|AK080353|984					AK080353	A630064D23Rik		ILMN_1235412	004830673	S	72	ACGGCTCTGAGTATAGAGTAACACTGTGCTGGCCGCGGGGCTGCTCCCGA										
Mus musculus	RefSeq	ILMN_200222	ILMN_200222	LOC385982	XM_359024.1	XM_359024.1			38080991	XM_359024.1	LOC385982		ILMN_1233829	001660010	S	396	TGGTTGCTGGCAGGGTAAGTTCACGGACCAGACGGAACCTCTTTGGGTGC										
Mus musculus	Riken	ILMN_203397	ILMN_203397	5330429J23RIK	ri|5330429J23|PX00054B23|AK030544|2395					AK030544	5330429J23Rik		ILMN_1222863	007150427	S	2227	TCTGCTGCTTCTGGGTTAAAGTATTCTGGATGGTAGCCAGCAATCACGGC										
Mus musculus	Riken	ILMN_203375	ILMN_203375	9430095K15RIK	ri|9430095K15|PX00110N02|AK035166|1616					AK035166	9430095K15Rik		ILMN_1231540	004730753	S	1448	GTACAGCCTCAAAAGTGGGCTCTTAATCTTTCCCAGAGCAGTCTGATTAG										
Mus musculus	MEEBO	ILMN_223166	ILMN_223166	NTF3	scl28398.3.1_50	NM_008742.1			6679143	NM_008742.1	Ntf3		ILMN_2760161	006350097	S	245	CCAGCCAATGATTGCAACGGACACAGAGCTACTACGGCAACAGAGACGCT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IDA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into a glial cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 7403] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IDA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation [goid 48484] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The process by which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons [goid 48699] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with the neurotrophin p75 receptor [goid 5166] [evidence TAS]; Interacting selectively with a neurotrophin receptor [goid 5165] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212877	ILMN_228721	TTC9B	NM_028417.1	NM_028417.1		73032	110625932	NM_028417.1	Ttc9b	NP_082693.1	ILMN_1237237	001090022	S	518	CCTATCGTGCCGGCATTGCCTTCTACCACTTGGGTGATTATGCACGTGCG	7	+	28440024-28440073	7qA3	Mus musculus tetratricopeptide repeat domain 9B (Ttc9b), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC107339; 2900074C18Rik	MGC107339; 2900074C18Rik
Mus musculus	RefSeq	ILMN_213800	ILMN_213800	SLC23A2	NM_018824.2	NM_018824.2		54338	42741687	NM_018824.2	Slc23a2	NP_061294.2	ILMN_2640927	002140594	S	6045	GACAGTAGAGATGTCTCTCTTTTATTTGAGTTTGTGACTGACTTTGCCTA	2	-	131878501-131878550	2qF2	Mus musculus solute carrier family 23 (nucleobase transporters), member 2 (Slc23a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ascorbate(out) + Na+(out) = ascorbate(in) + Na+(in) [goid 8520] [evidence IMP]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ascorbate(out) + Na+(out) = ascorbate(in) + Na+(in) [goid 8520] [evidence ISA]	AI844736; NBTL1; mKIAA0238; SVCT2; YSPL2; Slc23a1	AI844736; NBTL1; mKIAA0238; SVCT2; YSPL2; Slc23a1
Mus musculus	RefSeq	ILMN_228995	ILMN_228995	NLRP1C	NM_001039234.1	NM_001039234.1		627984	85986636	NM_001039234.1	Nlrp1c	NP_001034323.1	ILMN_3161399	004150066	S	3322	GAGGAAGCTCTTCAGCCTCAGCCAGTCATGGAATCAAACCTGCAAAGATT	11	-	71056017-71056066	11qB4	Mus musculus NLR family, pyrin domain containing 1C (Nlrp1c), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Nalp1c	Nalp1c
Mus musculus	RefSeq	ILMN_217241	ILMN_217241	RAET1D	NM_020030.2	NM_020030.2		56554	110625664	NM_020030.2	Raet1d	NP_064414.1	ILMN_2680756	002030747	S	651	GGGGAATTTGTGAAACAATTGAAATTCTTGATACACGGATGCAGTCAGAA	10	+	22091349-22091398	10qA3	Mus musculus retinoic acid early transcript delta (Raet1d), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]	RAE-1delta; MGC118478	RAE-1delta; MGC118478
Mus musculus	MEEBO	ILMN_217602	ILMN_217602	LOC333685	TRAV1_AF259072_T_cell_receptor_alpha_variable_1_132	XM_289972.1			28481148	XM_289972.1	LOC333685		ILMN_2685383	006110278	S	135	TCAGGGTTCAATGGGTTATCCTGGTACCAGCAACGTGAAGGCCACGCCCC										
Mus musculus	MEEBO	ILMN_193868	ILMN_193868	1500041N16RIK	scl34543.5_11				13385883	NM_026399	1500041N16Rik		ILMN_1240329	003840239	S	8	CAGGCAAGATCTCAAGGAGACCGACTGATAGTAATAGTTCCCCACCACTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]			
Mus musculus	MEEBO	ILMN_193868	ILMN_193868	1500041N16RIK	scl34543.5_11				13385883	NM_026399	1500041N16Rik		ILMN_2664993	003890010	S	1046	CGGACCTGACACCAAGGATGCAGACTGACTCAGAAAACCCAACCAAAGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]			
Mus musculus	RefSeq	ILMN_196012	ILMN_235198	MEF2C	NM_025282.2	NM_025282.2		17260	142366944	NM_025282.2	Mef2c	NP_079558.1	ILMN_1214950	001230440	S	706	GAAAGCCCCGATCCTGACTCCTCTTATGCACTCACCCCACGCACTGAAGA	13	+	83764995-83765044	13qC3	Mus musculus myocyte enhancer factor 2C (Mef2c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AV011172; 5430401D19Rik; 9930028G15Rik	AV011172; 5430401D19Rik; 9930028G15Rik
Mus musculus	RefSeq	ILMN_196012	ILMN_235198	MEF2C	NM_025282.2	NM_025282.2		17260	142366944	NM_025282.2	Mef2c	NP_079558.1	ILMN_2732465	005820369	S	2207	CATCCAAGCACGCTCACAAACCTGCAGGCATATCATTGGCGTATGGCACT	13	+	83802727-83802776	13qC3	Mus musculus myocyte enhancer factor 2C (Mef2c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AV011172; 5430401D19Rik; 9930028G15Rik	AV011172; 5430401D19Rik; 9930028G15Rik
Mus musculus	RefSeq	ILMN_199296	ILMN_199296	LOC235903	XM_142466.3	XM_142466.3			38093981	XM_142466.3	LOC235903		ILMN_1238784	002970441	S	1412	ATGGCTGGGCAAGGATCTTAAACATGGAGCCTCTCCCAGATGTGACGTCC										
Mus musculus	Riken	ILMN_207229	ILMN_207229	E330029N23RIK	ri|E330029N23|PX00675J08|AK087850|4178					AK087850	E330029N23Rik		ILMN_1257921	003390520	S	3984	AGCCAGCATGGAGATGGCACTGGCTGTTTGCACAGCTAAGTTAACCCCCT										
Mus musculus	Riken	ILMN_207040	ILMN_207040	NSG1	ri|4833403F23|PX00027J17|AK076451|2060					AK076451	Nsg1		ILMN_1214503	004150154	S	160	CCGCTCGGGTATTCCCTTAGTCGGGCATTGGGAGTCTCAGGTTCTCCTTC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IEA]	Interacting selectively with a dopamine receptor [goid 50780] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222325	ILMN_222325	NGP	NM_008694.1	NM_008694.1		18054	6679053	NM_008694.1	Ngp	NP_032720.1	ILMN_1228832	000730487	S	352	GCACAGGGAAATTCTTCAGAAGGCGGCAGTCAACCTCCCTGACCTTGACC	9	+	110324259-110324286:110324776-110324797	9qF2	Mus musculus neutrophilic granule protein (Ngp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	bectenecin	bectenecin
Mus musculus	MEEBO	ILMN_190949	ILMN_190949	HIP1	scl25924.32_40				22122460	NM_146001	Hip1		ILMN_2693373	006940722	S	6269	GGCATCTGCTGCATGCGTTCATGCAGAAGTGCCCACATACTTTTAGAGAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes [goid 30136] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence ISO]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISO]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISO]; The process by which clathrin triskelia are assembled into the ordered structure known as a clathrin cage [goid 48268] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence ISO]		
Mus musculus	RefSeq	ILMN_207476	ILMN_207476	ELMO2	NM_207705.1	NM_207705.1		140579	46877049	NM_207705.1	Elmo2	NP_997588.1	ILMN_3058341	000070224	I	2787	GCTCTGTTGGGATGATAGAGCGCAGTGAGCTAGGCACAGAAGAGAGCAGC	2	-	165117017-165117066	2qH3	Mus musculus engulfment and cell motility 2, ced-12 homolog (C. elegans) (Elmo2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1190002F24Rik; CED-12; mKIAA1834	1190002F24Rik; CED-12; mKIAA1834
Mus musculus	RefSeq	ILMN_207476	ILMN_207476	ELMO2	NM_207705.1	NM_207705.1		140579	46877049	NM_207705.1	Elmo2	NP_997588.1	ILMN_3135409	006450632	A	1902	GAGCTGATCAAGCAACAGCGCCTCAACCGGCTATGCGAGGGCAGCAGCTT	2	-	165120772-165120821	2qH3	Mus musculus engulfment and cell motility 2, ced-12 homolog (C. elegans) (Elmo2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1190002F24Rik; CED-12; mKIAA1834	1190002F24Rik; CED-12; mKIAA1834
Mus musculus	RefSeq	ILMN_207476	ILMN_207476	ELMO2	NM_207705.1	NM_207705.1		140579	46877049	NM_207705.1	Elmo2	NP_997588.1	ILMN_2587785	004570427	I	182	TGTCTAGTCTTCTCTGTTCCAGGGCATGTGTGTCTCTCTTCCCGAGGCCC	2	-	165142162-165142211	2qH3	Mus musculus engulfment and cell motility 2, ced-12 homolog (C. elegans) (Elmo2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1190002F24Rik; CED-12; mKIAA1834	1190002F24Rik; CED-12; mKIAA1834
Mus musculus	Riken	ILMN_204772	ILMN_204772	B930083N20RIK	ri|B930083N20|PX00166C16|AK047530|2933					AK047530	B930083N20Rik		ILMN_1224630	001780274	S	2878	GCAGTGCTTGCTGGATAAGCTGGACAGCGCAGGTTTGATCCCAAGAATCC										
Mus musculus	RefSeq	ILMN_209636	ILMN_209636	CPA3	NM_007753.1	NM_007753.1		12873	6680998	NM_007753.1	Cpa3	NP_031779.1	ILMN_1246690	003420672	S	75	GGAGAAGGTATTCCGTGTGAAACTCCAGAATGAAAAGCACGCCAGTGTCT	3	-	20141839-20141888	3qA2	Mus musculus carboxypeptidase A3, mast cell (Cpa3), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	MC-CPA; mMC-CPA	MC-CPA; mMC-CPA
Mus musculus	RefSeq	ILMN_209636	ILMN_209636	CPA3	NM_007753.1	NM_007753.1		12873	6680998	NM_007753.1	Cpa3	NP_031779.1	ILMN_2991799	001410739	S	1136	TTGAGCTTCGTGATAAAGGAAAGTCTGGGTTTCTTCTTCCAGAATCCCGG	3	-	20115778-20115827	3qA2	Mus musculus carboxypeptidase A3, mast cell (Cpa3), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	MC-CPA; mMC-CPA	MC-CPA; mMC-CPA
Mus musculus	RefSeq	ILMN_209636	ILMN_209636	CPA3	NM_007753.1	NM_007753.1		12873	6680998	NM_007753.1	Cpa3	NP_031779.1	ILMN_2609590	007650487	S	1259	AATGAATTGCCCTTGTTTTGAAACGTGCTAATCAATGCTTGGGTGGAGTC	3	-	20115655-20115703:20115704-20115704	3qA2	Mus musculus carboxypeptidase A3, mast cell (Cpa3), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	MC-CPA; mMC-CPA	MC-CPA; mMC-CPA
Mus musculus	MEEBO	ILMN_188514	ILMN_188514	DLGAP1	scl00224997.1_139				51339020	NM_027712	Dlgap1		ILMN_2468256	006250368	S	8	GAAGGCCTATTTATCTTGTCCAAGTGAACGGCATTTGTATATTCATAAGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_229680	ILMN_229680	BC026782	NM_001025575.1	NM_001025575.1		545366	71361675	NM_001025575.1	BC026782	NP_001020746.1	ILMN_3116375	003440296	A	270	GAAACCATGTGAATTTCCACAATTCAAATATGGACGTCTGTATTATGAAG	1	-	141718874-141718923	1qF	Mus musculus cDNA sequence BC026782 (BC026782), mRNA.				Cfhrb_4/2	Cfhrb_4/2
Mus musculus	RefSeq	ILMN_229680	ILMN_229680	BC026782	NM_001025575.1	NM_001025575.1		545366	71361675	NM_001025575.1	BC026782	NP_001020746.1	ILMN_3041654	002070349	I	935	AACGTGGATATCAGAAAGCAAGAGGATCACTGCCATTTCGTACAAAGTGC	1	-	141707417-141707466	1qF	Mus musculus cDNA sequence BC026782 (BC026782), mRNA.				Cfhrb_4/2	Cfhrb_4/2
Mus musculus	RefSeq	ILMN_220057	ILMN_220057	SMAD5	NM_008541.2	NM_008541.2		17129	42734445	NM_008541.2	Smad5	NP_032567.1	ILMN_3076864	003780382	I	903	CCCAGCCTATGGATACAAGCAGTAACATGATTCCTCAGACCATGCCCAGC	13	+	56829953-56829990:56834211-56834222	13qB1	Mus musculus MAD homolog 5 (Drosophila) (Smad5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IMP]; The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone [goid 2051] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 12151307] [evidence IEP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110051M15Rik; Dwf-C; MusMLP; Madh5; AI451355	1110051M15Rik; Dwf-C; MusMLP; Madh5; AI451355
Mus musculus	RefSeq	ILMN_220057	ILMN_220057	SMAD5	NM_008541.2	NM_008541.2		17129	42734445	NM_008541.2	Smad5	NP_032567.1	ILMN_3155789	007100326	A	6091	GGAGCCTTAGGACGGTCAGGCAATGCACTCTTTACCACGGCTGGCTAAGG	13	+	56843367-56843416	13qB1	Mus musculus MAD homolog 5 (Drosophila) (Smad5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IMP]; The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone [goid 2051] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 12151307] [evidence IEP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110051M15Rik; Dwf-C; MusMLP; Madh5; AI451355	1110051M15Rik; Dwf-C; MusMLP; Madh5; AI451355
Mus musculus	RefSeq	ILMN_249193	ILMN_249193	5930434B04RIK	NM_029862.1	NM_029862.1		381356	58037484	NM_029862.1	5930434B04Rik	NP_084138.1	ILMN_3070533	002450132	I	2053	CCACCTGCTCCTCTGGTTACTTGGGTAGGCATGGACTTGGGCCAGTTCTG	2	+	26842699-26842748	2qA3	Mus musculus RIKEN cDNA 5930434B04 gene (5930434B04Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_249193	ILMN_249193	5930434B04RIK	NM_029862.1	NM_029862.1		381356	58037484	NM_029862.1	5930434B04Rik	NP_084138.1	ILMN_3149218	001470324	A	148	GGAGCGGTGTCCTGTGCCATCTCTGGACTCTTCAACTGCGTCACTATCCA	2	+	26832106-26832114:26836102-26836142	2qA3	Mus musculus RIKEN cDNA 5930434B04 gene (5930434B04Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_223923	ILMN_223923	DIO3	scl3664.1.1_276				26006466	NM_172119	Dio3		ILMN_1221784	002970376	S	1740	TCCTAGGCAGAAAGCGCGGGTTGTGGGGCGGGGTGAAGACCAATCAGTGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42404] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3,5,3'-L-triiodo-L-thyronine + iodide + acceptor + H+ = L-thyroxine + donor-H2 [goid 4800] [evidence IMP]; Catalysis of the reaction: 3,3',5'-triiodo-L-thyronine + iodide + A + H+ = L-thyroxine + AH2 [goid 33798] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201530	ILMN_246985	EG637748	XM_917238.2	XM_917238.2		637748	94405096	XM_917238.2	EG637748	XP_922331.1	ILMN_2594202	004490301	S	343	CAGCTTCCTGAAGCGGGTGAAGGAGAATGACCAGAAGAAAAAGGAAGCCA	18	-	82693055-82693104	18qE3	PREDICTED: Mus musculus predicted gene, EG637748 (EG637748), mRNA.					
Mus musculus	RefSeq	ILMN_217393	ILMN_217393	UFSP2	NM_138668.1	NM_138668.1		192169	20149753	NM_138668.1	Ufsp2	NP_619609.1	ILMN_2717569	001710309	S	494	ACATGAGCTTGCCAATTGACGCCGTTGTGTCTGTTGCTCCAGAGGAATCA	8	+	47068982-47069031	8qB1.1	Mus musculus UFM1-specific peptidase 2 (Ufsp2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IDA]	Ufsp2; MGC7482	Ufsp2; MGC7482
Mus musculus	RefSeq	ILMN_217393	ILMN_217393	UFSP2	NM_138668.1	NM_138668.1		192169	20149753	NM_138668.1	Ufsp2	NP_619609.1	ILMN_2957904	004150296	S	1096	TGGATCACGGCAGTGGATTGGGTCTATTGAAGTACAGATGGTACTAAACC	8	+	47077506-47077555	8qB1.1	Mus musculus UFM1-specific peptidase 2 (Ufsp2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IDA]	Ufsp2; MGC7482	Ufsp2; MGC7482
Mus musculus	RefSeq	ILMN_217393	ILMN_217393	UFSP2	NM_138668.1	NM_138668.1		192169	20149753	NM_138668.1	Ufsp2	NP_619609.1	ILMN_2957898	006270075	S	1222	CAACCATTTCCAGAATGTGGGCACCCCAGTGATGGTCGGGGGAGGGGTAT	8	+	47079414-47079445:47080892-47080909	8qB1.1	Mus musculus UFM1-specific peptidase 2 (Ufsp2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IDA]	Ufsp2; MGC7482	Ufsp2; MGC7482
Mus musculus	RefSeq	ILMN_223243	ILMN_223243	DES	NM_010043.1	NM_010043.1		13346	33563249	NM_010043.1	Des	NP_034173.1	ILMN_2836982	001780411	S	2097	CCCCTCCCACCGCAGGGGCCTGGACAGAAACAATAATAAAGAGACAAGCA	1	+	75364238-75364287	1qC4	Mus musculus desmin (Des), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISO]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]		
Mus musculus	MEEBO	ILMN_189394	ILMN_189394	RRN3	scl078005.2_255				51769344	XM_156394	Rrn3		ILMN_2460879	000240152	S	20	AGATACCATACTGAAATAGAATATATAGTGATATGCCTGATACCGAAGCT							Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP];  [goid 6361] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 7028] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly the nucleolus [goid 7000] [evidence IMP]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]			
Mus musculus	RefSeq	ILMN_188128	ILMN_309869	LOC100047628	XM_001476703.1	XM_001476703.1		100047628	149255640	XM_001476703.1	LOC100047628	XP_001476753.1	ILMN_2450019	001240333	S	115	GCCACCATCTCCTGCAGAGCCAGTGAAAGTGTTGAATATTATGGCACAAG					PREDICTED: Mus musculus similar to Chain L, Structural Basis Of Antigen Mimicry In A Clinically Relevant Melanoma Antigen System, transcript variant 3 (LOC100047628), mRNA.					
Mus musculus	RefSeq	ILMN_217531	ILMN_309869	LOC100047628	XM_001476703.1	XM_001476703.1		100047628	149255640	XM_001476703.1	LOC100047628	XP_001476753.1	ILMN_2704562	003400100	S	603	GAGCAGCACCCTCACGTTGACCAAGGACGAGTATGAACGACATAACAGCT					PREDICTED: Mus musculus similar to Chain L, Structural Basis Of Antigen Mimicry In A Clinically Relevant Melanoma Antigen System, transcript variant 3 (LOC100047628), mRNA.					
Mus musculus	RefSeq	ILMN_200005	ILMN_200005	LOC384172	XM_357466.1	XM_357466.1			38079665	XM_357466.1	LOC384172		ILMN_1234144	006100315	S	1073	CTCAGGGATCGGTTGACAAGGAGGAGGTCTCAGGATGTGGGGGCACTGTT										
Mus musculus	RefSeq	ILMN_196593	ILMN_196593	GSTA2	NM_008182.3	NM_008182.3		14858	118130920	NM_008182.3	Gsta2	NP_032208.2	ILMN_1248849	003710465	S	457	CAGGACCAAAAACCGTTACTTGCCTGCCTTTGAAAAGGTGTTGAAGAGCC	9	-	78180012-78180025:78181568-78181603	9qE1	Mus musculus glutathione S-transferase, alpha 2 (Yc2) (Gsta2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Gstc2; Gstc-2; Gst2-2; MGC29061	Gstc2; Gstc-2; Gst2-2; MGC29061
Mus musculus	RefSeq	ILMN_219041	ILMN_219041	CHRAC1	NM_053068.2	NM_053068.2		93696	31340569	NM_053068.2	Chrac1	NP_444298.1	ILMN_3005266	001190138	S	508	ACTTGCAACTTGTTGCATTCCCTCTTGCAGTGGAAAGGACTGGACAGCAG	15	+	72920988-72921037	15qD3	Mus musculus chromatin accessibility complex 1 (Chrac1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	YCL1; 2810406L04Rik; 2410152E03Rik	YCL1; 2810406L04Rik; 2410152E03Rik
Mus musculus	RefSeq	ILMN_222580	ILMN_222580	TDRD12	NM_028034.2	NM_028034.2		71981	130497316	NM_028034.2	Tdrd12	NP_082310.1	ILMN_2751804	003130167	S	1413	CTTAAAGCCAGACTCCTGACGACATGCCAGCCCTTTCCAACACAGAGTGT	7	-	36278787-36278818:36278819-36278836	7qB2	Mus musculus tudor domain containing 12 (Tdrd12), transcript variant 2, mRNA.				ECAT8; 2410070K17Rik	ECAT8; 2410070K17Rik
Mus musculus	RefSeq	ILMN_185365	ILMN_230293	LOC636696	XR_003821.1	XR_003821.1		636696	94378740	XR_003821.1	LOC636696		ILMN_2426436	005700241	S	47	CAGATGCCAGATGTGACATCCAGATGACTCAGTGTCCAGCCACCCCTTTC					PREDICTED: Mus musculus hypothetical LOC636696 (LOC636696), mRNA.					
Mus musculus	Riken	ILMN_203900	ILMN_203900	9330174H21RIK	ri|9330174H21|PX00106B18|AK034293|2020					AK034293	9330174H21Rik		ILMN_2560832	004900528	S	1832	TGGAACAGTTACCTAGGAGGGGATCAGTGAGGTAGCTTAGAGGATGAGTC										
Mus musculus	RefSeq	ILMN_230329	ILMN_230329	RAPGEF1	NM_001039086.1	NM_001039086.1		107746	84875503	NM_001039086.1	Rapgef1	NP_001034175.1	ILMN_3140516	001510037	A	5806	GACAGCTCTGGAGTTTCCGTGTGGGGATATCGAGGTGCGATGTGTGGGTT	2	+	29595456-29595505	2qB	Mus musculus Rap guanine nucleotide exchange factor (GEF) 1 (Rapgef1), transcript variant 2, mRNA.		The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence TAS]	C3G; 4932418O06Rik; Grf2	C3G; 4932418O06Rik; Grf2
Mus musculus	RefSeq	ILMN_230329	ILMN_230329	RAPGEF1	NM_001039086.1	NM_001039086.1		107746	84875503	NM_001039086.1	Rapgef1	NP_001034175.1	ILMN_3062810	001470609	I	2475	AGGCCAGCAGTGAGGAAGCTGGTGGGGATGAGTATGTCAGTCTGTACTCC	2	+	29576170-29576219	2qB	Mus musculus Rap guanine nucleotide exchange factor (GEF) 1 (Rapgef1), transcript variant 2, mRNA.		The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence TAS]	C3G; 4932418O06Rik; Grf2	C3G; 4932418O06Rik; Grf2
Mus musculus	RefSeq	ILMN_220377	ILMN_220377	OLFR1391	NM_146468.1	NM_146468.1		258460	33238937	NM_146468.1	Olfr1391	NP_666679.1	ILMN_2721271	001410307	S	729	CCTCCTTGTAGTTTCTATGTTTTATGGCTCAACCATCTACACGTACTTGC	11	+	49141643-49141692	11qB1.2	Mus musculus olfactory receptor 1391 (Olfr1391), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-27; MGC157504; RP23-10M12.8	MOR256-27; MGC157504; RP23-10M12.8
Mus musculus	RefSeq	ILMN_207504	ILMN_325393	4930579K19RIK	XR_035250.1	XR_035250.1		75881	149260180	XR_035250.1	4930579K19Rik		ILMN_1260519	003060240	I	792	CCTGAGAGAAGTAAGGGTGAGTTTTCATTAGGTAGTGCCTGGCTCTTGGG	9	-	98463189-98463238	9qE3.3	PREDICTED: Mus musculus RIKEN cDNA 4930579K19 gene (4930579K19Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_218722	ILMN_218722	FLOT1	NM_008027.2	NM_008027.2		14251	118131036	NM_008027.2	Flot1	NP_032053.1	ILMN_1241618	002480719	S	1613	CCAGTGCCCTGCACCAAGATTGATTATCTTCAGCCCATCCCAACTATTTA	17	+	35969651-35969700	17qB1	Mus musculus flotillin 1 (Flot1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A heteromeric complex of flotillin 1, flotillin 2, caveolin 1 and caveolin 2 within the caveolar membrane [goid 16600] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_220425	ILMN_242208	OLFR169	NM_001011855.1	NM_001011855.1		258158	58801467	NM_001011855.1	Olfr169	NP_001011855.1	ILMN_2778293	004250008	S	561	GTCATGTATAGACACAACACACTATGAACGAGGCGTTTATGTGAGTGGCA	16	-	19566364-19566413	16qA3	Mus musculus olfactory receptor 169 (Olfr169), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR273-3P	MOR273-3P
Mus musculus	RefSeq	ILMN_224045	ILMN_245539	LOC666096	XM_981599.1	XM_981599.1		666096	94407432	XM_981599.1	LOC666096	XP_986693.1	ILMN_2773668	006860672	S	378	AGAAATCGTTGGAGATACACGGGAGATGATCAACAACAAGTCGTGTGAGC	X	+	51751391-51751411:51756926-51756954	XqA5	PREDICTED: Mus musculus similar to Xlr-related, meiosis regulated (LOC666096), mRNA.					
Mus musculus	RefSeq	ILMN_222876	ILMN_222876	SLFN2	NM_011408.1	NM_011408.1		20556	6755569	NM_011408.1	Slfn2	NP_035538.1	ILMN_1219074	004120307	S	1278	GAGGAATGGGTGAAACTCCAGATGAATGCCCCATCAGGTTGAAGGGGGAT	11	+	82883794-82883835:82883836-82883843	11qC	Mus musculus schlafen 2 (Slfn2), mRNA.		Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]		Shlf2	Shlf2
Mus musculus	RefSeq	ILMN_216611	ILMN_216611	PFN1	NM_011072.2	NM_011072.2		18643	31981568	NM_011072.2	Pfn1	NP_035202.1	ILMN_2863965	003800307	S	624	CCCTTCTTTCCATACACACACATACCATTATTTTTTGGGCCATTACCCCA	11	-	70468223-70468272	11qB3	Mus musculus profilin 1 (Pfn1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers [goid 42989] [evidence TAS]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pfn	Pfn
Mus musculus	RefSeq	ILMN_209684	ILMN_209684	MRPL43	NM_053164.3	NM_053164.3		94067	55769544	NM_053164.3	Mrpl43	NP_444394.1	ILMN_2598222	003120689	S	513	GATGCAAGCACAGTAAAGAACCAGGCGCTTTGGACCGTGAGAGGGATAGG	19	-	45080154-45080188:45080189-45080203	19qC3	Mus musculus mitochondrial ribosomal protein L43 (Mrpl43), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930442D21Rik; bMRP36a	4930442D21Rik; bMRP36a
Mus musculus	RefSeq	ILMN_209684	ILMN_209684	MRPL43	NM_053164.3	NM_053164.3		94067	55769544	NM_053164.3	Mrpl43	NP_444394.1	ILMN_2633805	002970114	S	208	TTCGCCCGACGGAACCCAGGAGTCGTAGTATACGTGAACCCGCGCCCGTG	19	-	45080581-45080630	19qC3	Mus musculus mitochondrial ribosomal protein L43 (Mrpl43), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930442D21Rik; bMRP36a	4930442D21Rik; bMRP36a
Mus musculus	RefSeq	ILMN_188841	ILMN_188841	ZFP318	NM_207671.2	NM_207671.2		57908	46849777	NM_207671.2	Zfp318	NP_997554.1	ILMN_2456200	000130524	S	2552	AAGCCTGAAAAAGAAAAATCTAAGAGCCCAGAAAAAGAGTTGTCACCCTC	17	+	46542964-46543013	17qC	Mus musculus zinc finger protein 318 (Zfp318), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	TZF; 2610034E08Rik; D530032D06Rik	TZF; 2610034E08Rik; D530032D06Rik
Mus musculus	RefSeq	ILMN_188841	ILMN_188841	ZFP318	NM_207671.2	NM_207671.2		57908	46849777	NM_207671.2	Zfp318	NP_997554.1	ILMN_1212982	004780093	S	6112	GCCTGAACAAGAAGCTGCAGTTGATGTCATCCCAGACCACACAAGGTCCA	17	+	46550653-46550702	17qC	Mus musculus zinc finger protein 318 (Zfp318), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	TZF; 2610034E08Rik; D530032D06Rik	TZF; 2610034E08Rik; D530032D06Rik
Mus musculus	RefSeq	ILMN_214837	ILMN_214837	LRG1	NM_029796.2	NM_029796.2		76905	31981359	NM_029796.2	Lrg1	NP_084072.1	ILMN_2652500	000290097	S	1263	CCCCCAGGCCACCTTGTGTTTATCTGGCTTTGACACGTCTGTTTCAGGGG	17	-	56259141-56259190	17qD	Mus musculus leucine-rich alpha-2-glycoprotein 1 (Lrg1), mRNA.				1300008B03Rik; Lrg; MGC102387; Lrhg; 2310031E04Rik	1300008B03Rik; Lrg; MGC102387; Lrhg; 2310031E04Rik
Mus musculus	MEEBO	ILMN_214771	ILMN_214771	1500019C06RIK	scl28047.15_452	NM_177323.2			31341109	NM_177323.2	1500019C06Rik		ILMN_1218880	001430537	S	2782	CCGAATCAAGGGGAGCTGTTGTCAAAAGCTGAATGTCGCAATAGACTGTA										
Mus musculus	RefSeq	ILMN_217378	ILMN_217378	OLFR270	NM_146607.1	NM_146607.1		258600	33238913	NM_146607.1	Olfr270	NP_666818.1	ILMN_2682548	001010431	S	712	ACCTGTTCAGCCCACCTAACCGTGGTCATCTTATTCTATGGTTCAGCCCT	4	+	52984212-52984261	4qB2	Mus musculus olfactory receptor 270 (Olfr270), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC157524; MOR262-9	MGC157524; MOR262-9
Mus musculus	RefSeq	ILMN_219657	ILMN_219657	2810453I06RIK	NM_133703.3	NM_133703.3		67238	141802312	NM_133703.3	2810453I06Rik	NP_598464.2	ILMN_2711884	006110309	S	2121	GTGTTTTGGGAAAATAATAAAATCTGTTCTTTAGCATAATAAATATGTTT	5	+	144325335-144325384	5qG2	Mus musculus RIKEN cDNA 2810453I06 gene (2810453I06Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AW047776; Sipar; 1500026F15Rik	AW047776; Sipar; 1500026F15Rik
Mus musculus	Riken	ILMN_206200	ILMN_206200	C130018E23RIK	ri|C130018E23|PX00167E06|AK081443|2040					AK081443	C130018E23Rik		ILMN_1230719	004670427	S	1688	CACAGCTGGTGCCTACTTGTCCAGCGTGGGGAACCCTTAGGAAGTGCATT										
Mus musculus	RefSeq	ILMN_215610	ILMN_215610	BICC1	NM_031397.2	NM_031397.2		83675	118130749	NM_031397.2	Bicc1	NP_113574.1	ILMN_2939138	000460593	S	2907	TCGCCAGTATCATTCAGACATTGCGAGCGTCAGTGGCCGCTGGTAGCGGT	10	-	70387988-70387992:70387993-70388037	10qB5.3	Mus musculus bicaudal C homolog 1 (Drosophila) (Bicc1), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]	jcpk; MGC124370; Bic-C; bpk	jcpk; MGC124370; Bic-C; bpk
Mus musculus	RefSeq	ILMN_215610	ILMN_215610	BICC1	NM_031397.2	NM_031397.2		83675	118130749	NM_031397.2	Bicc1	NP_113574.1	ILMN_2661576	000150240	S	2994	ACACGATCCGTGGACAGTCTTCACTGCACTCGCCTGCCCTTGGCACTCGG	10	-	70387901-70387950	10qB5.3	Mus musculus bicaudal C homolog 1 (Drosophila) (Bicc1), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]	jcpk; MGC124370; Bic-C; bpk	jcpk; MGC124370; Bic-C; bpk
Mus musculus	RefSeq	ILMN_214623	ILMN_214623	TSSK6	NM_032004.1	NM_032004.1		83984	14030780	NM_032004.1	Tssk6	NP_114393.1	ILMN_2650022	006020142	S	1071	CTGCTGTTGGGTTCTGATTCCTCCTGCACAAACTGATTGCTGGAGAGCGC	8	+	72427184-72427233	8qB3.3	Mus musculus testis-specific serine kinase 6 (Tssk6), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progressive compaction of the spermatid chromatin so that it reaches a level of condensation that is not compatible with nuclear activities such as transcription or DNA replication [goid 35092] [evidence IMP]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Sstk	Sstk
Mus musculus	Riken	ILMN_203584	ILMN_203584	A230092L08RIK	ri|A230092L08|PX00130G07|AK039072|1446					AK039072	A230092L08Rik		ILMN_2558418	003360487	S	1169	CTGCCCAAGACAGCTCTCTCCAGGAATCTCCAAATAGCTCATCTCTTGCC										
Mus musculus	RefSeq	ILMN_210058	ILMN_210058	MAGEB1	NM_010759.1	NM_010759.1		17145	8659569	NM_010759.1	Mageb1	NP_034889.1	ILMN_2601802	004250494	S	25	GCCAGGTCTCCATTAAGTCCAAGGTATTCTCTACCTGGTAGTACAGAGGT	X	-	89261598-89261647	XqC2	Mus musculus melanoma antigen, family B, 1 (Mageb1), mRNA.				Mage-b1; MAGE-Xp; dam1; Magel1; Mage-rs1; Smage1	Mage-b1; MAGE-Xp; dam1; Magel1; Mage-rs1; Smage1
Mus musculus	Riken	ILMN_205113	ILMN_205113	D930025M23RIK	ri|D930025M23|PX00202B04|AK053033|1649					AK053033	D930025M23Rik		ILMN_1219380	006940709	S	1566	GGATGGTCCACCTCTTCTGACCTCTTGCGGGTACTAGGCACGATGTGGCA										
Mus musculus	MEEBO	ILMN_186804	ILMN_186804	9530053J19RIK	scl48683.1.1_103						9530053J19Rik		ILMN_1255621	001780707	S	7	GGCTTCCAACGGTGGAGTCTGTTAGAGTCCAGAAATTTTGATTGAGGCTG										
Mus musculus	RefSeq	ILMN_216002	ILMN_216002	GBX1	NM_015739.2	NM_015739.2		231044	118130963	NM_015739.2	Gbx1	NP_056554.1	ILMN_2666236	001780184	S	1376	AACCCTGCTCCGGGAGAGGCCAGCGTATTCCCGGGACACAAGACTATTTG	5	-	24010270-24010319	5qA3	Mus musculus gastrulation brain homeobox 1 (Gbx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gbx-1	Gbx-1
Mus musculus	MEEBO	ILMN_188051	ILMN_188051	STK22A	scl49368.2_121				6678164	NM_009435	Stk22a		ILMN_1251399	003170128	S	2	GCTGTGTGCGTCACTCAGGGGCTTTAAGACTAGGACTTCAAGGTGGCCTC										
Mus musculus	RefSeq	ILMN_200690	ILMN_200690	LOC383455	XM_357071.1	XM_357071.1			38085235	XM_357071.1	LOC383455		ILMN_2539661	003140215	S	541	CCACAAGGGGACAGTGTATCACCTCCACAAGGGGACAGTGTATCGCCTCC										
Mus musculus	RefSeq	ILMN_188786	ILMN_188786	TYK2	NM_018793.1	NM_018793.1		54721	9055371	NM_018793.1	Tyk2	NP_061263.1	ILMN_2455701	005390672	S	4	AGCCAAGGCTGTACCTGAAGGCCACGAGTACTACCGAGTGCGCGAGGACG	9	-	20879099-20879113:20881574-20881608	9qA3	Mus musculus tyrosine kinase 2 (Tyk2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 4718] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	JTK1	JTK1
Mus musculus	RefSeq	ILMN_188786	ILMN_188786	TYK2	NM_018793.1	NM_018793.1		54721	9055371	NM_018793.1	Tyk2	NP_061263.1	ILMN_2848018	000060411	S	4515	TGCATACACACACAGGAAGGCCATTTGTCACATATGTGGGACTCTGCCAG	9	-	20854644-20854693	9qA3	Mus musculus tyrosine kinase 2 (Tyk2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 4718] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	JTK1	JTK1
Mus musculus	Riken	ILMN_205279	ILMN_205279	OA1	ri|7530427O11|PX00312O11|AK033060|918					AK033060	Oa1		ILMN_1242255	003170044	S	840	AAGCAGAGCTCAGTACAGCAGAGACCTCCTGACAAGTCTTGCCCTTTGTC										
Mus musculus	RefSeq	ILMN_221132	ILMN_221132	GDF3	NM_008108.4	NM_008108.4		14562	145966707	NM_008108.4	Gdf3	NP_032134.2	ILMN_2731407	002000577	S	1106	CCAAGCTCTCGCCCATCTCCATGCTCTATCAGGATAGTGATAAGAACGTC				6qF1	Mus musculus growth differentiation factor 3 (Gdf3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MGC123990; ecat9; Vgr2; Vgr-2; MGC123991; C78318; Gdf-3	MGC123990; ecat9; Vgr2; Vgr-2; MGC123991; C78318; Gdf-3
Mus musculus	RefSeq	ILMN_214881	ILMN_250748	GLIS2	NM_031184.3	NM_031184.3		83396	95006994	NM_031184.3	Glis2	NP_112461.2	ILMN_2745305	004810739	S	2252	GCCCCCAGTGATCATAGATAGGCCCACACTTGGGAATTCCTTAGACCCCT	16	+	4614590-4614639	16qA1	Mus musculus GLIS family zinc finger 2 (Glis2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Gli5; Nkl; MGC36775; Klf16	Gli5; Nkl; MGC36775; Klf16
Mus musculus	RefSeq	ILMN_214881	ILMN_250748	GLIS2	NM_031184.3	NM_031184.3		83396	95006994	NM_031184.3	Glis2	NP_112461.2	ILMN_1226316	001230017	S	2079	GGGTGCTAAGGCCTCAATCACTTCCATTTCCCTAGTCTGTAGTCTGGGTG	16	+	4614417-4614466	16qA1	Mus musculus GLIS family zinc finger 2 (Glis2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Gli5; Nkl; MGC36775; Klf16	Gli5; Nkl; MGC36775; Klf16
Mus musculus	RefSeq	ILMN_216630	ILMN_216630	OLFR733	NM_146663.1	NM_146663.1		258657	33239005	NM_146663.1	Olfr733	NP_666874.1	ILMN_2878245	004810343	S	581	CAGTCGAGCTCCTTATGATCTTCAATAGTGGCCTGCTTACCCTTGTGTGC	14	-	50918352-50918401	14qC1	Mus musculus olfactory receptor 733 (Olfr733), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR241-2	MOR241-2
Mus musculus	RefSeq	ILMN_216630	ILMN_216630	OLFR733	NM_146663.1	NM_146663.1		258657	33239005	NM_146663.1	Olfr733	NP_666874.1	ILMN_1250702	004010139	S	397	CCACTGTCATGAATCCCAGAGTCTGCTATGTGATGTTGTTGGCTCCCTGG	14	-	50918536-50918585	14qC1	Mus musculus olfactory receptor 733 (Olfr733), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR241-2	MOR241-2
Mus musculus	RefSeq	ILMN_209736	ILMN_209736	PTBP1	NM_008956.2	NM_008956.2		19205	116517302	NM_008956.2	Ptbp1	NP_032982.2	ILMN_3140788	005820070	A	2659	ATATTTTGGTAACGACTACAGGCTCAGTATTGTCCTGGGGCCAGCCCTGG	10	+	79326982-79327031	10qC1	Mus musculus polypyrimidine tract binding protein 1 (Ptbp1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AA407203; PTB3; PTB-1; HNRPI; PTB2; AL033359; Ptb; PTB4; pPTB	AA407203; PTB3; PTB-1; HNRPI; PTB2; AL033359; Ptb; PTB4; pPTB
Mus musculus	RefSeq	ILMN_193816	ILMN_220447	RAB11B	NM_008997.3	NM_008997.3		19326	114431264	NM_008997.3	Rab11b	NP_033023.1	ILMN_2500700	003400377	S	5511	TTCCAATATCCTGCTCCCAAACCCTTTGTCACGGCAACTAAAATGATCTT	17	-	33879933-33879982	17qB1	Mus musculus RAB11B, member RAS oncogene family (Rab11b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	A730055L17Rik	A730055L17Rik
Mus musculus	RefSeq	ILMN_193816	ILMN_220447	RAB11B	NM_008997.3	NM_008997.3		19326	114431264	NM_008997.3	Rab11b	NP_033023.1	ILMN_2678592	004480347	S	3978	GTTGGGTTTGTAACTGTCATAGTGTAGCAAGGGACTGGAGAAAACACTAC	17	-	33881466-33881515	17qB1	Mus musculus RAB11B, member RAS oncogene family (Rab11b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	A730055L17Rik	A730055L17Rik
Mus musculus	RefSeq	ILMN_220447	ILMN_220447	RAB11B	NM_008997.3	NM_008997.3		19326	114431264	NM_008997.3	Rab11b	NP_033023.1	ILMN_1259068	003610193	S	1872	TCTCGAACTCTTATTCTCCCTGTAGCCCTTGCACTGTTGCCCGTTACTAA	17	-	33883572-33883621	17qB1	Mus musculus RAB11B, member RAS oncogene family (Rab11b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	A730055L17Rik	A730055L17Rik
Mus musculus	MEEBO	ILMN_190965	ILMN_190965	UBG	scl00107729.1_261						Ubg		ILMN_1217074	004260445	S	19	GGCAAGACCATCACCTTGGACGTCGAGCCCAGTGTTACCACCAAGAAGGG										
Mus musculus	RefSeq	ILMN_199209	ILMN_199209	KRT1-5	XM_126758.2	XM_126758.2			38091809	XM_126758.2	Krt1-5		ILMN_2534431	007550477	S	1544	GCTGGCTGAGATTCGTTGTGACCTGGAGCGGCAGAACCATGAGTATCAGG										
Mus musculus	Riken	ILMN_206425	ILMN_206425	RELN	ri|C230051N12|PX00175A06|AK082447|4843					AK082447	Reln		ILMN_1220785	002570092	S	4300	GGCCTGCATTTTCATGCACAATACCAAGGGATGGCCCTAGATGGCGGGTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the spinal cord [goid 21511] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration [goid 21800] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of small GTPase mediated signal transduction [goid 51057] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine/tyrosine = ADP + protein serine/threonine/tyrosine phosphate [goid 4712] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218648	ILMN_218648	GPR44	NM_009962.2	NM_009962.2		14764	34328164	NM_009962.2	Gpr44	NP_034092.1	ILMN_1234360	006590195	S	2470	GTAAAATGTCACCAAGTCCCTCCTGCTTTACTCAGTGTACCTGTCACACC	19	+	11016827-11016876	19qA	Mus musculus G protein-coupled receptor 44 (Gpr44), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence ISS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 45745] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IDA]; Combining with an N-formyl peptide to initiate a change in cell activity [goid 4982] [evidence IEA]; Combining with prostaglandin D (PGD(2)) to initiate a change in cell activity [goid 4956] [evidence IDA]; Combining with prostaglandin F (PGF (2-alpha)) to initiate a change in cell activity [goid 4958] [evidence IDA]; Combining with prostaglandin J (PGJ(2)), a metabolite of prostaglandin D (PGD(2)) to initiate a change in cell activity [goid 1785] [evidence IDA]	MGC130436; Crth2; Grp45	MGC130436; Crth2; Grp45
Mus musculus	RefSeq	ILMN_197796	ILMN_197796	FBXO10	XM_194139.6	XM_194139.6		269529	94371757	XM_194139.6	Fbxo10	XP_194139.6	ILMN_2529395	002470592	S	4548	CTGGCCCTTCCCATGTGTAGCACTGTTCACTGCACTTGTTTGGTGGCCCC	4	-	45047236-45047285	4qB1	PREDICTED: Mus musculus F-box protein 10 (Fbxo10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IPI]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_203732	ILMN_203732	9830160N02RIK	ri|9830160N02|PX00118F20|AK036679|3111					AK036679	9830160N02Rik		ILMN_1232365	003370646	S	2798	GACTCACATCCACACTTAACCCCTACAGCTCACTGACATCACCCATGCTG										
Mus musculus	RefSeq	ILMN_198681	ILMN_234301	EG245651	XM_908302.2	XM_908302.2		245651	94408304	XM_908302.2	EG245651	XP_913395.1	ILMN_1230003	003170315	S	197	AGGGTCACGCCATCACTGGGGGCTTCAGCAGAGGCTGTAATGCTCAGCCT				XqF2	PREDICTED: Mus musculus predicted gene, EG245651 (EG245651), mRNA.					
Mus musculus	RefSeq	ILMN_195467	ILMN_252548	CLDN10	NM_021386.3	NM_021386.3		58187	144226219	NM_021386.3	Cldn10	NP_067361.1	ILMN_2515816	002340056	S	760	GTTGTGCAAGAGAACTGTCCTCACAATAGTCCTTCCAAGGCTCTCCTGTA	14	+	119273568-119273617	14qE4	Mus musculus claudin 10 (Cldn10), transcript variant 2, mRNA.				D14Ertd728e; 6720456I16Rik	D14Ertd728e; 6720456I16Rik
Mus musculus	RefSeq	ILMN_195467	ILMN_252548	CLDN10	NM_021386.3	NM_021386.3		58187	144226219	NM_021386.3	Cldn10	NP_067361.1	ILMN_2723576	003870753	S	187	ATCTGCGTTACCGATTCCACCGGTGTCGCCAACTGCAAGGAGTTCCCCTC	14	+	119254365-119254414	14qE4	Mus musculus claudin 10 (Cldn10), transcript variant 2, mRNA.				D14Ertd728e; 6720456I16Rik	D14Ertd728e; 6720456I16Rik
Mus musculus	RefSeq	ILMN_201703	ILMN_236904	9330134C04RIK	NM_001013608.1	NM_001013608.1		432766	62000691	NM_001013608.1	9330134C04Rik	NP_001013626.1	ILMN_1246247	006840674	S	1617	TGGCAGTGATAGAGACGCTGTGTACCAAAGCACCCAGTACCTCAGCCTCC	13	+	64000648-64000697	13qB3	Mus musculus RIKEN cDNA 9330134C04 gene (9330134C04Rik), mRNA.				Sr278	Sr278
Mus musculus	RefSeq	ILMN_236904	ILMN_236904	9330134C04RIK	NM_001013608.1	NM_001013608.1		432766	62000691	NM_001013608.1	9330134C04Rik	NP_001013626.1	ILMN_2816547	004670706	S	2242	GCAGCCACTGCCCTCTCCTCATTGGCATTGGGAACTTACTGTTTTCCTTC	13	+	64001273-64001322	13qB3	Mus musculus RIKEN cDNA 9330134C04 gene (9330134C04Rik), mRNA.				Sr278	Sr278
Mus musculus	RefSeq	ILMN_194336	ILMN_251565	D11BWG0517E	NM_001039168.1	NM_001039168.1		52897	85677494	NM_001039168.1	D11Bwg0517e	NP_001034257.1	ILMN_2505510	005720601	S	1466	GCTGATCCTTACCATCACACCATCGGCCCCACAGCAACCTACAGCATCGG	11	-	118355470-118355519	11qE2	Mus musculus DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed (D11Bwg0517e), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200071	ILMN_200071	LOC385686	XM_358912.1	XM_358912.1			38080212	XM_358912.1	LOC385686		ILMN_1231124	004280050	S	72	GCAGGCAAGATCTCCTCTTACAGGGAAGACTACTTTCTGTGGAGTCCCGG										
Mus musculus	RefSeq	ILMN_214337	ILMN_214337	DNAJC4	NM_020566.1	NM_020566.1		57431	10181195	NM_020566.1	Dnajc4	NP_065591.1	ILMN_2646976	004390537	S	734	CCCCAGGACACAAGCCCCTGAGAGGCTTAACTAAATGGGACCTTCATTGG	19	-	7062457-7062486:7062487-7062506	19qA	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 4 (Dnajc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	2010301J22Rik; Hspf2; Mcg18	2010301J22Rik; Hspf2; Mcg18
Mus musculus	RefSeq	ILMN_218167	ILMN_218167	PSMB9	NM_013585.2	NM_013585.2		16912	118129789	NM_013585.2	Psmb9	NP_038613.1	ILMN_1242466	002450064	S	716	AACTTTCTGGAACCAGAAGGCCGGTGCGATGGGCAAAGGTGAAATATGTG	17	-	34320616-34320665	17qB1	Mus musculus proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) (Psmb9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	Lmp-2; Lmp2	Lmp-2; Lmp2
Mus musculus	RefSeq	ILMN_238584	ILMN_238584	ZYG11B	NM_001033634.1	NM_001033634.1		414872	85702060	NM_001033634.1	Zyg11b	NP_001028806.1	ILMN_2788382	002970543	S	3730	CAGGGCCAGCATGGACTAGACAGCAAGAGCCCATCTCAAAACAAACCAGG	4	-	107732559-107732608	4qC7	Mus musculus zyg-ll homolog B (C. elegans) (Zyg11b), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2810482G21Rik; FLJ13456; Gm431; mKIAA1730; D4Mgi23; 1110046I03Rik	2810482G21Rik; FLJ13456; Gm431; mKIAA1730; D4Mgi23; 1110046I03Rik
Mus musculus	RefSeq	ILMN_213177	ILMN_225434	ZFP821	NM_029468.1	NM_029468.1		75871	74315962	NM_029468.1	Zfp821	NP_083744.1	ILMN_2634458	001030470	S	352	TGGTATGCAGCTATGATAGAAGACTGCCTGAAAGCTGCTTCCTTGCCACT	8	+	112231948-112231997	8qD3	Mus musculus zinc finger protein 821 (Zfp821), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213175	ILMN_225434	ZFP821	NM_029468.1	NM_029468.1		75871	74315962	NM_029468.1	Zfp821	NP_083744.1	ILMN_2693387	003310670	S	1045	TCAGAAGATCAGCGGTCCAACTGCGCTGTGTGCGGAGCCCGTTTTACCAG	8	+	112246886-112246935	8qD3	Mus musculus zinc finger protein 821 (Zfp821), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213175	ILMN_225434	ZFP821	NM_029468.1	NM_029468.1		75871	74315962	NM_029468.1	Zfp821	NP_083744.1	ILMN_2634443	005260753	S	1348	CTTGAACGAGAACGCACAGCCAAGAAGAGCCGTCGAGACAATGAGACCCC	8	+	112248099-112248148	8qD3	Mus musculus zinc finger protein 821 (Zfp821), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	Riken	ILMN_202257	ILMN_202257	0610009J05RIK	ri|0610009J05|R000002G03|AK002411|1570					AK002411	0610009J05Rik		ILMN_1257639	000110403	S	1412	TAAAAGAAGTGGGTGTTAGCCGGGCAGTGTTGGCGCATACCTTTAATCCC										
Mus musculus	RefSeq	ILMN_196427	ILMN_196427	4731413G05RIK	XM_138942.1	XM_138942.1			20870424	XM_138942.1	4731413G05Rik		ILMN_2679007	002350553	S	1314	ACAAGAAGGCTGCCAGTCAGAATTCCCCAGCTCTCCTTGCCCACAAGTGG										
Mus musculus	RefSeq	ILMN_196427	ILMN_196427	4731413G05RIK	XM_138942.1	XM_138942.1			20870424	XM_138942.1	4731413G05Rik		ILMN_2524134	006550524	S	961	GGAGCAGCCCCTGACTCTGAGCCTAGATCACAGAAAATCCCCATCTCTGC										
Mus musculus	RefSeq	ILMN_201001	ILMN_201001	LOC384706	XM_357806.1	XM_357806.1			38087860	XM_357806.1	LOC384706		ILMN_1214020	004780639	S	594	TGATTGTTTCCTCGACCAATGGATAAGCCATTTCCAGGATGAGACACTGG										
Mus musculus	RefSeq	ILMN_243583	ILMN_243583	FBXL18	NM_001033312.1	NM_001033312.1		231863	75677481	NM_001033312.1	Fbxl18	NP_001028484.1	ILMN_2952730	003190519	S	2558	CCTCTCGCTTGCTTCAGCTTGGGGACTCTCGCCTGCTCCTTTGTTCATGG	5	-	143137131-143137180	5qG2	Mus musculus F-box and leucine-rich repeat protein 18 (Fbxl18), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C330021B20Rik	C330021B20Rik
Mus musculus	RefSeq	ILMN_219811	ILMN_219811	NOS3	NM_008713.2	NM_008713.2		18127	31982149	NM_008713.2	Nos3	NP_032739.2	ILMN_2788593	004570066	S	3693	GCTAGCCACCCTCTCTGAAGAATGCCTACAGCATTGGTTGCAAGGCTGCC	5	+	23894109-23894158	5qA3	Mus musculus nitric oxide synthase 3, endothelial cell (Nos3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases angiogenesis [goid 45766] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [evidence IMP]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51926] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43267] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hyperplasia [goid 14740] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; A process, occurring in smooth muscle, in which there is an increase in cell number by cell division, often leading to an increase in the size of an organ [goid 14806] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+ [goid 4517] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]	eNOS; Nos-3; ecNOS; 2310065A03Rik	eNOS; Nos-3; ecNOS; 2310065A03Rik
Mus musculus	RefSeq	ILMN_212671	ILMN_212671	NDUFA7	NM_023202.3	NM_023202.3		66416	133891825	NM_023202.3	Ndufa7	NP_075691.1	ILMN_2629044	006620670	S	212	CCCTCAATCATCATGTCCTCACAAAAGGCCCTGGTGTCAGGCAAGGCCGC	17	+	33962582-33962604:33966612-33966638	17qB1	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a) (Ndufa7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP [goid 42773] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]	2400007M02Rik; 14.5kDa	2400007M02Rik; 14.5kDa
Mus musculus	RefSeq	ILMN_222245	ILMN_222245	BC022224	NM_177564.4	NM_177564.4		192970	141802498	NM_177564.4	BC022224	NP_808232.2	ILMN_2746830	002710114	S	1135	CTAGGAAAGGGATGTACCTAGAAGGGGCATTGCTCTATCCTCTTACACCC	11	-	84634449-84634498	11qC	Mus musculus cDNA sequence BC022224 (BC022224), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC18716	MGC18716
Mus musculus	RefSeq	ILMN_209072	ILMN_209072	CEACAM13	NM_028171.2	NM_028171.2		69785	142348500	NM_028171.2	Ceacam13	NP_082447.1	ILMN_2692200	000050524	S	880	GCGACTCCTGGGTGAAGGTGGGGTTTATTCTTCTCTGTATACCTAAGACA	7	+	18598771-18598820	7qA2	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 13 (Ceacam13), mRNA.				1600025J19Rik; 1600012K03Rik; MGC117613	1600025J19Rik; 1600012K03Rik; MGC117613
Mus musculus	RefSeq	ILMN_221521	ILMN_257135	2210411K11RIK	NM_029384.1	NM_029384.1		664968	124358926	NM_029384.1	2210411K11Rik	NP_083660.1	ILMN_2736690	004390333	S	598	CTGTGCATCACTAGGCCACCAGGATATCCACCTGTCACCTCACTTGGATA	7	-	4736790-4736839	7qA1	Mus musculus RIKEN cDNA 2210411K11 gene (2210411K11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197904	ILMN_197904	LOC242842	XM_144185.3	XM_144185.3			38079501	XM_144185.3	LOC242842		ILMN_1234060	000150463	S	793	CTCTCTAGGGTAAGAAGTTGTATGTTGGGCTCAAGTATGCTTCCGCCGCG										
Mus musculus	RefSeq	ILMN_213236	ILMN_213236	PARS2	NM_172272.2	NM_172272.2		230577	139948346	NM_172272.2	Pars2	NP_758476.2	ILMN_1246508	000780431	S	1760	CCCAGGTCACTTTCCCTTGAGCTGAGTTTCTGGGTGTAAGATGAGAATGC	4	+	106327419-106327468	4qC7	Mus musculus prolyl-tRNA synthetase (mitochondrial)(putative) (Pars2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling glycine to glycyl-tRNA, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6426] [evidence IEA]; The process of coupling proline to prolyl-tRNA, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6433] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly) [goid 4820] [evidence IEA]; Catalysis of the reaction: ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro) [goid 4827] [evidence IEA]	BC027073; RP23-97O7.3; MGC47008	BC027073; RP23-97O7.3; MGC47008
Mus musculus	RefSeq	ILMN_211912	ILMN_211912	1700024P04RIK	XM_127485.5	XM_127485.5		69382	149264594	XM_127485.5	1700024P04Rik	XP_127485.1	ILMN_2620691	005910703	S	351	TGCCGAAGAAGCTGGCTACGCTTGCTGTGACTTTTGGAAGTAAAGCCGTC				13qD1	PREDICTED: Mus musculus RIKEN cDNA 1700024P04 gene (1700024P04Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221461	ILMN_221461	BMP15	NM_009757.3	NM_009757.3		12155	34328446	NM_009757.3	Bmp15	NP_033887.1	ILMN_2735937	001850450	S	2767	ACCAGTTTCAAGTCGCTGTCTCTCCTCCCATCTCAAAGCACAGCATGGTT	X	-	5891461-5891510	XqA1.1	Mus musculus bone morphogenetic protein 15 (Bmp15), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Bmp-15; AU021453; AU018861; C86824; AU015375; GDF-9B; C87336	Bmp-15; AU021453; AU018861; C86824; AU015375; GDF-9B; C87336
Mus musculus	RefSeq	ILMN_188782	ILMN_245140	TRAPPC6B	NM_030057.2	NM_030057.2		78232	70778830	NM_030057.2	Trappc6b	NP_084333.1	ILMN_2455667	000650538	S	580	CTAGCATTCACATGTGGCTTAATCAGAGGTGGTTTGTCGAACTTGGGAAT	12	-	60145280-60145329	12qC1	Mus musculus trafficking protein particle complex 6B (Trappc6b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		C79212; 5830498C14Rik	C79212; 5830498C14Rik
Mus musculus	RefSeq	ILMN_188815	ILMN_245140	TRAPPC6B	NM_030057.2	NM_030057.2		78232	70778830	NM_030057.2	Trappc6b	NP_084333.1	ILMN_2455955	007560064	S	508	CAGGACAACAAATTTCGACTACTCATTCAGCTGTCTGCAGGAAAACAGTA	12	-	60149128-60149177	12qC1	Mus musculus trafficking protein particle complex 6B (Trappc6b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		C79212; 5830498C14Rik	C79212; 5830498C14Rik
Mus musculus	MEEBO	ILMN_188076	ILMN_188076	YES	scl27939.12_16				6678616	NM_009535	Yes		ILMN_2449616	005560445	S	10	TAATTGTGTTGATTACTTTTTACTACTGCTTCAAGTAAGATTTTTCCCCT										
Mus musculus	MEEBO	ILMN_188076	ILMN_188076	YES	scl27939.12_16				6678616	NM_009535	Yes		ILMN_2516531	001510414	S	11	GTGGAACTTTAACACACCAGAAACGAAAGTTGTTAAAAGCAGCCTTCTAG										
Mus musculus	RefSeq	ILMN_213410	ILMN_213410	ACYP2	NM_029344.3	NM_029344.3		75572	146141114	NM_029344.3	Acyp2	NP_083620.1	ILMN_2636803	002690402	S	449	TACTGAAATGTCTGAAACTGAAAACATTTACTCACCTATGTTTTAGCAAG				11qA4	Mus musculus acylphosphatase 2, muscle type (Acyp2), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate [goid 3998] [evidence IEA]	2310004B09Rik	2310004B09Rik
Mus musculus	RefSeq	ILMN_215485	ILMN_215485	PPIF	NM_134084.1	NM_134084.1		105675	19527309	NM_134084.1	Ppif	NP_598845.1	ILMN_3002181	003610056	S	1383	CTGCCTGACCTCATGCTGTTCTCAAGAGGGAAGTGTCTTCTGGCAGGCTT	14	+	26519788-26519837	14qA3	Mus musculus peptidylprolyl isomerase F (cyclophilin F) (Ppif), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	AW457192; PPIase	AW457192; PPIase
Mus musculus	RefSeq	ILMN_198118	ILMN_198118	LOC278244	XM_204449.3	XM_204449.3			38081958	XM_204449.3	LOC278244		ILMN_1228688	007550189	S	78	TGCTCTGTTTCTGGCTCCAAACTGGAACCAAGACCACTCACCATCATCAG										
Mus musculus	RefSeq	ILMN_209846	ILMN_209846	RABEP2	NM_030566.2	NM_030566.2		70314	140970572	NM_030566.2	Rabep2	NP_085043.2	ILMN_2599751	007160279	S	2314	AGGCCAGTAGCCAGTCCCAGTCTCTGGCACGCCCAGCTTGTGGCTAGAAG	7	+	133589196-133589245	7qF3	Mus musculus rabaptin, RAB GTPase binding effector protein 2 (Rabep2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	AI462746; 2610011A08Rik; Fra; MGC8300	AI462746; 2610011A08Rik; Fra; MGC8300
Mus musculus	RefSeq	ILMN_200483	ILMN_200483	LOC383258	XM_356949.1	XM_356949.1			38082627	XM_356949.1	LOC383258		ILMN_2538924	005900349	S	2196	GGCCTCGAGTGCAGGGCTTCTAGGTTGCATCTTTATCCCCAAGTGCTATA										
Mus musculus	MEEBO	ILMN_208772	ILMN_208772	PTX3	scl23122.2_23	NM_008987.2			31982084	NM_008987.2	Ptx3		ILMN_2662802	001740008	S	1525	TGGTGCTTTCAGATTAATGTCTGCCTCTGTCAGATAAACCCTCAGATAAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process by which a microorganism (or other particulate material) is rendered more susceptible to phagocytosis by coating with an opsonin, a blood serum protein such as a complement component or antibody [goid 8228] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species [goid 1878] [evidence IMP]	Interacting selectively with zymosan [goid 1872] [evidence IMP]		
Mus musculus	RefSeq	ILMN_214101	ILMN_214101	ZC3HAV1L	NM_172467.2	NM_172467.2		209032	141803007	NM_172467.2	Zc3hav1l	NP_766055.1	ILMN_1215954	005700278	S	1384	ATCACCTCCCTTATTCTGTAATATTTCATACTCCTAACAGTGTTTGAATA	6	-	38242498-38242547	6qB1	Mus musculus zinc finger CCCH-type, antiviral 1-like (Zc3hav1l), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	B130055L09Rik	B130055L09Rik
Mus musculus	Riken	ILMN_207337	ILMN_207337	RAD51L1	ri|6030499C08|PX00646J15|AK077994|2573					AK077994	Rad51l1		ILMN_1218360	000620195	S	2298	CCCTCTGCTAAACCAATGTAAGCGTGTTCTTGTCAGGGCTGCTCACTGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219660	ILMN_219660	6720463M24RIK	NM_175265.4	NM_175265.4		77744	146198617	NM_175265.4	6720463M24Rik	NP_780474.1	ILMN_1234641	001340056	S	2115	CTCATGGCTTTCTCCTGTCCTACAGGGTCAATGAACTGCTTGTTAAGACT				14qE2.2	Mus musculus RIKEN cDNA 6720463M24 gene (6720463M24Rik), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		AI317232	AI317232
Mus musculus	RefSeq	ILMN_198855	ILMN_315235	LOC669429	XR_031193.1	XR_031193.1		669429	149258343	XR_031193.1	LOC669429		ILMN_1226699	006130427	S	438	GGACAAGATGAAGTCTTTCTGCCAGACCTTGACCACCCAGGAGACCATCA	8	+	5639943-5639992	8qA1.1	PREDICTED: Mus musculus similar to neuroleukin (LOC669429), misc RNA.					
Mus musculus	MEEBO	ILMN_184820	ILMN_184820	UNG	scl0003983.1_83				15029659	BC011039	Ung		ILMN_2421862	006280301	S	15	ACCACGCGCAGCCCGGAGCCGGTCCCAGGGAGCGGAGTGGCGGCCGAGAT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: uridine + H2O = D-ribose + uracil [goid 45437] [evidence IEA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence IDA]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [evidence IMP]		
Mus musculus	RefSeq	ILMN_214512	ILMN_214512	AI413782	NM_134044.2	NM_134044.2		104799	31981633	NM_134044.2	AI413782	NP_598805.2	ILMN_1249137	005490189	S	2186	CCCTGTCAACTTTGTGTAGGGACGTGTGAGGGATATAGGGTCCCTCTGAC	12	-	88580098-88580147	12qD2	Mus musculus expressed sequence AI413782 (AI413782), mRNA.					
Mus musculus	RefSeq	ILMN_197630	ILMN_197630	LOC211085	XM_139357.2	XM_139357.2			38076990	XM_139357.2	LOC211085		ILMN_2528801	004570735	S	220	ATCGCATTGGACTTCTGCCATGAGGAAATTGTCCCCCAGATCAAGGAGGG										
Mus musculus	RefSeq	ILMN_217702	ILMN_217702	ISYNA1	NM_023627.1	NM_023627.1		71780	12963756	NM_023627.1	Isyna1	NP_076116.1	ILMN_1228752	004670634	S	1487	GCAGCCCTGTAGTGAATGCCCTCTTCCGCCAGCGCAGCTGTATCGAGAAT	8	+	73120753-73120802	8qB3.3	Mus musculus myo-inositol 1-phosphate synthase A1 (Isyna1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6021] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: D-glucose 6-phosphate = 1D-myo-inositol 3-phosphate; requires NAD, which dehydrogenates the CHOH group to CO at C-5 of the glucose 6-phosphate, making C-6 into an active methylene, able to condense with the aldehyde at C-1. Finally, the enzyme-bound NADH reconverts C-5 into the CHOH form [goid 4512] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU018670; 1300017C10Rik	AU018670; 1300017C10Rik
Mus musculus	Riken	ILMN_206701	ILMN_206701	A630008E13RIK	ri|A630008E13|PX00316F01|AK080266|3359					AK080266	A630008E13Rik		ILMN_2582062	001980674	S	2735	CCTATGTTTCCTCAAAGGCTGGGACTGTAGACATATGCCTCATTGGCCAG										
Mus musculus	RefSeq	ILMN_215473	ILMN_215473	GDNF	NM_010275.2	NM_010275.2		14573	118129978	NM_010275.2	Gdnf	NP_034405.1	ILMN_2701617	007560372	S	205	TAAGAGGCTTCTCGAAGCGCCCGCTGAAGACCACTCCCTCGGCCACCGCC	15	+	7765689-7765738	15qA1	Mus musculus glial cell line derived neurotrophic factor (Gdnf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IDA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence ISO]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IGI]; The maintenance of membrane composition in a postsynaptic membrane, the specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft) [goid 1941] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence ISO]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the transforming growth factor beta receptor [goid 5160] [evidence TAS]	AI385739	AI385739
Mus musculus	RefSeq	ILMN_215473	ILMN_215473	GDNF	NM_010275.2	NM_010275.2		14573	118129978	NM_010275.2	Gdnf	NP_034405.1	ILMN_2659994	001230142	S	3379	AGCACACTTCTTTGGAAGTTCTGACCTCTCTGATGTCTCGGTCGTTTGTG	15	+	7787445-7787494	15qA1	Mus musculus glial cell line derived neurotrophic factor (Gdnf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IDA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence ISO]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IGI]; The maintenance of membrane composition in a postsynaptic membrane, the specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft) [goid 1941] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence ISO]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the transforming growth factor beta receptor [goid 5160] [evidence TAS]	AI385739	AI385739
Mus musculus	RefSeq	ILMN_223256	ILMN_223256	TEX9	NM_009359.2	NM_009359.2		21778	110349992	NM_009359.2	Tex9	NP_033385.2	ILMN_2803289	003610437	S	519	GCAGAGGACGACAGCTTCTGTGGTGTGAGTAAGGACATTGGCACAGAGGC				9qD	Mus musculus testis expressed gene 9 (Tex9), mRNA.				tsec-1	tsec-1
Mus musculus	RefSeq	ILMN_223256	ILMN_223256	TEX9	NM_009359.2	NM_009359.2		21778	110349992	NM_009359.2	Tex9	NP_033385.2	ILMN_2803286	000730546	S	846	CAAAAACAGGCTGCCTCAAGTCAGAGTGCCACAGAGGTCCGTCTGAATCG				9qD	Mus musculus testis expressed gene 9 (Tex9), mRNA.				tsec-1	tsec-1
Mus musculus	RefSeq	ILMN_202380	ILMN_237230	LOC670300	XM_980520.1	XM_980520.1		670300	94389372	XM_980520.1	LOC670300	XP_985614.1	ILMN_1233101	006100204	S	888	CCATCAAAGGGTACTTCAAGGGTGCTACAAAGCCATGTCCTCAGAGCCCC					PREDICTED: Mus musculus hypothetical protein LOC670300 (LOC670300), mRNA.					
Mus musculus	RefSeq	ILMN_260587	ILMN_260587	1700049G17RIK	NM_028538.1	NM_028538.1		73430	74315968	NM_028538.1	1700049G17Rik	NP_082814.1	ILMN_2986059	007040674	S	5110	CAGCTGCTTAGAAGGTTGCCTTTTTCACCCAGTTTACACTATCTATTAGG				7qA3	Mus musculus RIKEN cDNA 1700049G17 gene (1700049G17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188242	ILMN_260587	1700049G17RIK	NM_028538.1	NM_028538.1		73430	74315968	NM_028538.1	1700049G17Rik	NP_082814.1	ILMN_2451007	005130068	S	396	CGAGGGCTCTACTTTTAGTAATGGCCACAACCATAGTATATTCAGTGGAC	7	-	28697123-28697172	7qA3	Mus musculus RIKEN cDNA 1700049G17 gene (1700049G17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211437	ILMN_227527	CMA2	NM_001024714.2	NM_001024714.2		545055	85861154	NM_001024714.2	Cma2	NP_001019885.1	ILMN_1221956	006550086	S	498	AAAAAGTATCTCACGTACCCTGAGAGAGGTAGAACTGAGAATCATGGGGA	14	+	56591988-56592037	14qC3	Mus musculus chymase 2, mast cell (Cma2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mcp10	Mcp10
Mus musculus	RefSeq	ILMN_222787	ILMN_227527	CMA2	NM_001024714.2	NM_001024714.2		545055	85861154	NM_001024714.2	Cma2	NP_001019885.1	ILMN_1248718	002940102	S	768	GGGCAAGTAGTGAAAAGCCTGACCTGCGTGCATCAGAGTCTTCAAGCCAG	14	+	56592653-56592662:56592663-56592702	14qC3	Mus musculus chymase 2, mast cell (Cma2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mcp10	Mcp10
Mus musculus	RefSeq	ILMN_205581	ILMN_315145	ENSMUSG00000052143	XM_001475287.1	XM_001475287.1		791387	149260012	XM_001475287.1	ENSMUSG00000052143	XP_001475337.1	ILMN_2573651	000620324	S	1044	CTGTGGACATAGGGATGTAACAAGACTAGCTGCTTCCGGCTCCTGGTGCC	9	-	60668946-60668995	9qB	PREDICTED: Mus musculus predicted gene, ENSMUSG00000052143 (ENSMUSG00000052143), mRNA.					
Mus musculus	Riken	ILMN_204479	ILMN_204479	B130007K04RIK	ri|B130007K04|PX00157M17|AK044842|1618					AK044842	B130007K04Rik		ILMN_1227796	002810703	S	995	TTCATAGGCAAGATGCTCAGCGGCCTGTGCCACCCCATGACTCACTTGGT										
Mus musculus	Riken	ILMN_204561	ILMN_204561	SEMA5A	ri|B230399C03|PX00162O14|AK046502|3159					AK046502	Sema5a		ILMN_2565924	005290274	S	2709	CAAATCCCAGCAGGTCCTGGTGATAAAGAATTTCCCATTAGGCTGGGGGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	 [goid 8046] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218905	ILMN_218905	CNTD1	NM_026562.1	NM_026562.1		68107	21311934	NM_026562.1	Cntd1	NP_080838.1	ILMN_3075270	006960433	I	186	GAAAACGCCCTGCTTCACTTGGCCCAGCAGAACGAGCAAGCCGTGAAGGA	11	+	101095478-101095527	11qD	Mus musculus cyclin N-terminal domain containing 1 (Cntd1), mRNA.				5430417M23Rik; MGC11788; 1700051C09Rik; 4921513J16Rik; Cntd	5430417M23Rik; MGC11788; 1700051C09Rik; 4921513J16Rik; Cntd
Mus musculus	RefSeq	ILMN_218905	ILMN_218905	CNTD1	NM_026562.1	NM_026562.1		68107	21311934	NM_026562.1	Cntd1	NP_080838.1	ILMN_3154335	003140148	A	918	GAATGCTGGAGCCAGGTTATAGGGCACTTGCAGAGCATCACTGGCATTGC	11	+	101103027-101103040:101103495-101103530	11qD	Mus musculus cyclin N-terminal domain containing 1 (Cntd1), mRNA.				5430417M23Rik; MGC11788; 1700051C09Rik; 4921513J16Rik; Cntd	5430417M23Rik; MGC11788; 1700051C09Rik; 4921513J16Rik; Cntd
Mus musculus	RefSeq	ILMN_218905	ILMN_218905	CNTD1	NM_026562.1	NM_026562.1		68107	21311934	NM_026562.1	Cntd1	NP_080838.1	ILMN_2701759	000070673	S	2017	AGTGCAGGAAGTTGAGAGAGATAAAATCCAGTGAAAACACATTAACGTCA	11	+	101104580-101104629	11qD	Mus musculus cyclin N-terminal domain containing 1 (Cntd1), mRNA.				5430417M23Rik; MGC11788; 1700051C09Rik; 4921513J16Rik; Cntd	5430417M23Rik; MGC11788; 1700051C09Rik; 4921513J16Rik; Cntd
Mus musculus	RefSeq	ILMN_216870	ILMN_216870	TTLL13	NM_177765.3	NM_177765.3		269954	119392071	NM_177765.3	Ttll13	NP_808433.2	ILMN_2676285	000580278	S	2843	CCGGAGGAGTCAAAAGCGACTACGGTGTAGTCGCCATCAGAAGATTGCTG	7	+	87405540-87405589	7qD3	Mus musculus tubulin tyrosine ligase-like family, member 13 (Ttll13), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	BC024578; 4921538O11; 1700111A04Rik	BC024578; 4921538O11; 1700111A04Rik
Mus musculus	MEEBO	ILMN_196259	ILMN_196259	MATN3	scl43399.8_287				48976068	NM_010770	Matn3		ILMN_1249779	003420102	S	20	ATCAAGCATATTATGTTGAATGGAATGAATAATTTTTGAATATGTAACAG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]				
Mus musculus	RefSeq	ILMN_196594	ILMN_196594	GSTM6	NM_008184.3	NM_008184.3		14867	113680505	NM_008184.3	Gstm6	NP_032210.3	ILMN_1219305	005080746	S	547	AGCAGCCATGGTTTGCAGGGGACAAGATCACCTTTGCAGACTTCCTCGTC	3	-	107743997-107744021:107744107-107744131	3qF2.3	Mus musculus glutathione S-transferase, mu 6 (Gstm6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196594	ILMN_196594	GSTM6	NM_008184.3	NM_008184.3		14867	113680505	NM_008184.3	Gstm6	NP_032210.3	ILMN_2633096	006520471	S	501	AAGGGCCTCCCAGATCAGCTGAAACTCTACTCGGAGTTCCTGGGGAAGCA	3	-	107744128-107744177	3qF2.3	Mus musculus glutathione S-transferase, mu 6 (Gstm6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]		
Mus musculus	MEEBO	ILMN_219685	ILMN_219685	C4BP	scl16324.10_60	NM_007576.2			31542274	NM_007576.2	C4bp		ILMN_2712176	007610253	S	2306	GCCTGTACCACTGTCGTTTGCATCTGTGTTCTCTTTGTAGGCACCATCCT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_196067	ILMN_196067	GFAP	scl39495.10_537				26080421	NM_010277	Gfap		ILMN_1215847	001450139	S	16	CGTGTTGTGTTCAAGCAGCCTGGTGGCTAGTGCCTTCATATTAGAGCACC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; Any constituent part of a cell, the basic structural and functional unit of all organisms [goid 44464] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]	Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins [goid 45103] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_230520	ILMN_230520	OLFR1209	NM_146461.1	NM_146461.1		258453	33239035	NM_146461.1	Olfr1209	NP_666672.1	ILMN_2783920	005310767	S	596	CCAACAGTGGAGCCATTTGTACAGTGAGTTTCCTCATGCTGATTGTCTCT	2	-	88749903-88749952	2qE1	Mus musculus olfactory receptor 1209 (Olfr1209), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129175; MOR230-7	MGC129175; MOR230-7
Mus musculus	RefSeq	ILMN_220897	ILMN_220897	SPCS1	NM_026911.1	NM_026911.1		69019	16975491	NM_026911.1	Spcs1	NP_081187.1	ILMN_2998020	007040327	S	435	TGGGACTTTCATGATTCAGCACCTGCTTTTGTTTCCTGTGAGATGAGCTG	14	-	29829053-29829102	14qB	Mus musculus signal peptidase complex subunit 1 homolog (S. cerevisiae) (Spcs1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A multi subunit protease complex located in the endoplasmic reticulum membrane that cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space [goid 5787] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISS]	The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any part of a ribosome [goid 43022] [evidence IDA]	1810004F21Rik	1810004F21Rik
Mus musculus	RefSeq	ILMN_220897	ILMN_220897	SPCS1	NM_026911.1	NM_026911.1		69019	16975491	NM_026911.1	Spcs1	NP_081187.1	ILMN_2728320	000450673	S	55	CCCCCGCAAACTTTACTCCTTAATAATCGGCTACGTCCGTTTCGTTGTCG	14	-	29830268-29830317	14qB	Mus musculus signal peptidase complex subunit 1 homolog (S. cerevisiae) (Spcs1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A multi subunit protease complex located in the endoplasmic reticulum membrane that cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space [goid 5787] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISS]	The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any part of a ribosome [goid 43022] [evidence IDA]	1810004F21Rik	1810004F21Rik
Mus musculus	Riken	ILMN_204454	ILMN_204454	B130007O15RIK	ri|B130007O15|PX00157A02|AK044848|1502					AK044848	B130007O15Rik		ILMN_1214795	006860243	S	1134	GGTGCCTCCTCTGAGTGGCTAAAGGTCTCGTCAGTCTGTGGTGTAGAACC										
Mus musculus	RefSeq	ILMN_219234	ILMN_329792	6530401D17RIK	NR_003641.1	NR_003641.1		76219	153792087	NR_003641.1	6530401D17Rik		ILMN_1226365	002060110	S	1312	AACCCCTGAAGCTTGGGGAATCATTTCAAGCTTAAATAGCTAGCAAAAAA				XqF1	Mus musculus RIKEN cDNA 6530401D17 gene (6530401D17Rik), non-coding RNA.					
Mus musculus	MEEBO	ILMN_184931	ILMN_184931	C030010B13RIK	scl077310.1_258				51712754	XM_488973	C030010B13Rik		ILMN_1236409	003390593	S	20	CTGCAGAGAGTAAACATGCCACCTGAATCGTGTTTTGCTTCGGGACCGCT										
Mus musculus	RefSeq	ILMN_212869	ILMN_234455	KLRG2	NM_001033171.2	NM_001033171.2		74253	119964697	NM_001033171.2	Klrg2	NP_001028343.2	ILMN_2631171	003140446	S	1619	GGGAACAAACCTGCGGCGGACATTTCAGACTCAACCCAGAGCATTCCTAT	6	-	38577273-38577322	6qB1	Mus musculus killer cell lectin-like receptor subfamily G, member 2 (Klrg2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2310020F24Rik	2310020F24Rik
Mus musculus	RefSeq	ILMN_220878	ILMN_220878	EMID2	NM_024474.2	NM_024474.2		140709	19263337	NM_024474.2	Emid2	NP_077794.2	ILMN_1247358	000780491	S	2616	CCCTGTAGGCTCTCTCTGAGTTATTCTCTGTCTCCACCAGGAGGTGATCA	5	-	137217673-137217722	5qG2	Mus musculus EMI domain containing 2 (Emid2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Col26a1; Emu2; Col26a; MGC7475; BC002218; 9430032K24Rik	Col26a1; Emu2; Col26a; MGC7475; BC002218; 9430032K24Rik
Mus musculus	RefSeq	ILMN_222406	ILMN_222406	SCGB1A1	NM_011681.2	NM_011681.2		22287	134053927	NM_011681.2	Scgb1a1	NP_035811.1	ILMN_2749152	001980082	S	349	CTCACTGGATTTCAGAGATATTCTACTGCTAAAGCCTTGTCACTGCCCTG	19	-	9158201-9158250	19qA	Mus musculus secretoglobin, family 1A, member 1 (uteroglobin) (Scgb1a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-13 production [goid 32696] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production [goid 32713] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production [goid 32714] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production [goid 32714] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-13 production [goid 32696] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production [goid 32713] [evidence IMP]	Stops, prevents or reduces the activity of the enzyme phospholipase A2 [goid 19834] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	UGB; CCSP; CC10; CC16; Utg; PCB-BP; UG	UGB; CCSP; CC10; CC16; Utg; PCB-BP; UG
Mus musculus	RefSeq	ILMN_227600	ILMN_227600	GM428	NM_001081644.1	NM_001081644.1		242502	126032312	NM_001081644.1	Gm428	NP_001075113.1	ILMN_2836827	002810064	S	1127	TCAGGCCTCTCTCCCTGGAGACAACAACTTTCAGCAGCTGTGGTCACCTC	4	+	73333265-73333314	4qC3	Mus musculus gene model 428, (NCBI) (Gm428), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_247289	ILMN_247289	SEC22C	NM_178677.2	NM_178677.2		215474	31341027	NM_178677.2	Sec22c	NP_848792.1	ILMN_2798964	000110433	S	2381	CAGCCACCAGGTGTCATTTCAGGAACGAGGCTATGTGACTCAAGAACTGG	9	-	121532025-121532074	9qF4	Mus musculus SEC22 vesicle trafficking protein-like C (S. cerevisiae) (Sec22c), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Sec22l3; 5930407I15Rik; C530046H07; 4932412K21	Sec22l3; 5930407I15Rik; C530046H07; 4932412K21
Mus musculus	RefSeq	ILMN_210684	ILMN_210684	LRRN4	NM_177303.4	NM_177303.4		320974	141802321	NM_177303.4	Lrrn4	NP_796277.2	ILMN_2608166	000730730	S	3146	GTAGCACAAACACCATGCTGCAGACAGCAAGTTTATCAAAGCTGAACCTG	2	-	132694531-132694580	2qF2	Mus musculus leucine rich repeat neuronal 4 (Lrrn4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-77H16.6; Nlrr4	RP23-77H16.6; Nlrr4
Mus musculus	RefSeq	ILMN_208863	ILMN_228105	2610528E23RIK	NM_025599.2	NM_025599.2		66497	142381765	NM_025599.2	2610528E23Rik	NP_079875.1	ILMN_1233531	003850593	S	986	GCAAGCACTCAGTAACTTACTCCACCGTAATCATGTTAAGTCCATCACCC	16	-	57302224-57302273	16qC1.1	Mus musculus RIKEN cDNA 2610528E23 gene (2610528E23Rik), mRNA.				AV122629; AV099812; 4930572F24Rik; 1110001A06Rik	AV122629; AV099812; 4930572F24Rik; 1110001A06Rik
Mus musculus	RefSeq	ILMN_201588	ILMN_256019	SLC25A2	XM_909128.3	XM_909128.3		83885	149269999	XM_909128.3	Slc25a2	XP_914221.2	ILMN_2543036	000520274	S	597	GGATGGTCCCTTAGGCTTCTATCGTGGACTCTCGACCACTCTTGCTCAGG				18qB3	PREDICTED: Mus musculus solute carrier family 25 (mitochondrial carrier, ornithine transporter) member 2 (Slc25a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_211077	ILMN_211077	REG2	NM_009043.1	NM_009043.1		19693	6677704	NM_009043.1	Reg2	NP_033069.1	ILMN_2612268	002470647	S	455	CAAGTCATGGGCCACTGGAGCTCCAAGCACTGCCAACCGTGGTTATTGTG	6	+	78357664-78357713	6qC3	Mus musculus regenerating islet-derived 2 (Reg2), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC107500	MGC107500
Mus musculus	Riken	ILMN_205935	ILMN_205935	SLC8A1	ri|C130038C08|PX00169H17|AK048160|3573					AK048160	Slc8a1		ILMN_2576303	002490564	S	3430	GCTGAAAGACACAAATGGTAATGTGCTCAGGTACACAGGCCAAAGCAGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189679	ILMN_189679	SLC7A11	scl22199.12_541				6756010	NM_011990	Slc7a11		ILMN_2740738	005080369	S	2101	GTACCTGGGCTATCATTCCTCTACCACGTTTCTTATTATGACTGAGAACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216612	ILMN_244669	POLR3A	NM_001081247.1	NM_001081247.1		218832	124486962	NM_001081247.1	Polr3a	NP_001074716.1	ILMN_1255559	001340014	S	4244	CCACCCAGGAGACCCCTGATATTTGACACACATGAATTCCACATCCCTCT	14	-	25268305-25268354	14qA3	Mus musculus polymerase (RNA) III (DNA directed) polypeptide A (Polr3a), mRNA.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	9330175N20Rik; RPC155; MGC62420; BC053071; RPC1	9330175N20Rik; RPC155; MGC62420; BC053071; RPC1
Mus musculus	RefSeq	ILMN_244669	ILMN_244669	POLR3A	NM_001081247.1	NM_001081247.1		218832	124486962	NM_001081247.1	Polr3a	NP_001074716.1	ILMN_3062860	006130646	I	1982	CGAACCAAGGGCAAGCAGTACTGTGGCAAGGGGGAAGACCTCTGCGTCAA	14	-	25289763-25289812	14qA3	Mus musculus polymerase (RNA) III (DNA directed) polypeptide A (Polr3a), mRNA.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	9330175N20Rik; RPC155; MGC62420; BC053071; RPC1	9330175N20Rik; RPC155; MGC62420; BC053071; RPC1
Mus musculus	RefSeq	ILMN_212810	ILMN_212810	EMD	NM_007927.2	NM_007927.2		13726	118131088	NM_007927.2	Emd	NP_031953.1	ILMN_2745259	000130039	S	404	GGAGAGTTATTTGACCACCAAGACATACGGGGAGCCTGAGTCTGTGGGCA	X	+	71499679-71499728	XqA7.3	Mus musculus emerin (Emd), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence TAS]; The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane [goid 5652] [evidence TAS]			AW550900	AW550900
Mus musculus	RefSeq	ILMN_212810	ILMN_212810	EMD	NM_007927.2	NM_007927.2		13726	118131088	NM_007927.2	Emd	NP_031953.1	ILMN_2630593	006350326	S	230	CGAGTACGAGACCCAGAGAAGGAGACTCTTACCCCCCAACTCGTCATCTT	X	+	71499156-71499205	XqA7.3	Mus musculus emerin (Emd), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence TAS]; The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane [goid 5652] [evidence TAS]			AW550900	AW550900
Mus musculus	RefSeq	ILMN_199343	ILMN_261470	LOC623871	XM_001006191.1	XM_001006191.1		623871	94420480	XM_001006191.1	LOC623871	XP_001006191.1	ILMN_1260406	004850730	S	87	CCTGTTCTTCTCAGCCAAGGTCCACAAGGAGATTGATTGGGTGACTGGCA					PREDICTED: Mus musculus similar to Cytochrome P450 2A4 (CYPIIA4) (Testosterone 15-alpha-hydroxylase) (P450-15-alpha) (P450-IIA3.1) (LOC623871), mRNA.					
Mus musculus	RefSeq	ILMN_220133	ILMN_220133	ACSM1	NM_054094.4	NM_054094.4		117147	19745154	NM_054094.4	Acsm1	NP_473435.1	ILMN_2717996	006650577	S	1883	CGATGGAATGCAGGAAGGGTAAATGTGGAAGAGAAAACCAAGACCCCAAC	7	+	126805874-126805923	7qF2	Mus musculus acyl-CoA synthetase medium-chain family member 1 (Acsm1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence ISS]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: an acyl + ATP + CoASH = AMP + diphosphate + acyl-CoA [goid 3996] [evidence ISS]; Catalysis of the ligation of a long-chain carboxylic acid to an acceptor, coupled to the hydrolysis of ATP [goid 15645] [evidence IDA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence ISS]	Bucs1; Acas3; Macs	Bucs1; Acas3; Macs
Mus musculus	MEEBO	ILMN_209488	ILMN_209488	TCFE2A	scl0003922.1_103	XM_125750.3			38090571	XM_125750.3	Tcfe2a		ILMN_2596277	005550044	S	2063	CATCAATGAGGCCTTTAAGGAGCTCGGCCGCATGTGCCAGCTGCACCTCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	MEEBO	ILMN_209488	ILMN_209488	TCFE2A	scl0003922.1_103	XM_125750.3			38090571	XM_125750.3	Tcfe2a		ILMN_2596278	006350010	S	2064	ATCAATGAGGCCTTTAAGGAGCTCGGCCGCATGTGCCAGCTGCACCTCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211586	ILMN_211586	FLOT2	NM_008028.2	NM_008028.2		14252	94536789	NM_008028.2	Flot2	NP_032054.1	ILMN_1227357	004810468	S	2640	GGATGTTGCACTACCCCACTGCCTGTCCCCCTCTGGTGAAAATAAAGATC	11	+	77873874-77873923	11qB5	Mus musculus flotillin 2 (Flot2), transcript variant 2, mRNA.	Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A heteromeric complex of flotillin 1, flotillin 2, caveolin 1 and caveolin 2 within the caveolar membrane [goid 16600] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI573412; Esa	AI573412; Esa
Mus musculus	RefSeq	ILMN_211586	ILMN_211586	FLOT2	NM_008028.2	NM_008028.2		14252	94536789	NM_008028.2	Flot2	NP_032054.1	ILMN_2688439	001470427	S	294	GAATATTGAGACGTCGGAGGGGGTCCCGCTATTCGTAACAGGGGTTGCAC	11	+	77866904-77866953	11qB5	Mus musculus flotillin 2 (Flot2), transcript variant 2, mRNA.	Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A heteromeric complex of flotillin 1, flotillin 2, caveolin 1 and caveolin 2 within the caveolar membrane [goid 16600] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI573412; Esa	AI573412; Esa
Mus musculus	Riken	ILMN_206337	ILMN_206337	WRB	ri|D330030F09|PX00192F08|AK084688|1289					AK084688	Wrb		ILMN_1220592	004180156	S	1078	ACGAGGTTGCCTGAGGAGGCCAGAAGAGGCAGTCACATTCTCTGGAACTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_208859	ILMN_208859	ARHGAP28	NM_172964.3	NM_172964.3		268970	141801000	NM_172964.3	Arhgap28	NP_766552.2	ILMN_2590219	006100468	S	3144	GACGTGCGGTGGGAGACATTCAGTCCTCGTGGTTCTAACGGGAACAAATC	17	-	68194119-68194168	17qE1.2	Mus musculus Rho GTPase activating protein 28 (Arhgap28), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AU044757; E130310N06; AW550892	AU044757; E130310N06; AW550892
Mus musculus	Riken	ILMN_206017	ILMN_206017	C230076M22RIK	ri|C230076M22|PX00176D08|AK082647|1860					AK082647	C230076M22Rik		ILMN_1231106	004560343	S	1636	CACACTTCTGTGATTCAAGGCCGGGTCCTGTCTGTTTCCACAACCCTGAG										
Mus musculus	RefSeq	ILMN_215320	ILMN_215320	1700067K01RIK	NM_183097.1	NM_183097.1		73453	34147068	NM_183097.1	1700067K01Rik	NP_898920.1	ILMN_2927643	004890768	S	1286	GCCCGGCATGGGCCACCGAATACCAAGTGCGGGTAGACTTTTCTGTTAAT				8qC3	Mus musculus RIKEN cDNA 1700067K01 gene (1700067K01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_240795	ILMN_240795	TGFBR3	NM_011578.2	NM_011578.2		21814	47271510	NM_011578.2	Tgfbr3	NP_035708.2	ILMN_2789239	000510722	S	5495	ATCCATTTCCTGCGTGTGTTCTCCGCAGGCTTGCCTGAGTGTGTGGGGTG	5	-	107536022-107536071	5qE5	Mus musculus transforming growth factor, beta receptor III (Tgfbr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The expansion of a cardiac muscle cell population by cell division [goid 60038] [evidence IMP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any glycan (polysaccharide) containing a substantial proportion of aminomonosaccharide residues [goid 5539] [evidence IDA]; Interacting selectively with TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types [goid 50431] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IPI]	TBRIII; AU015626; AW215636; 1110036H20Rik	TBRIII; AU015626; AW215636; 1110036H20Rik
Mus musculus	RefSeq	ILMN_213652	ILMN_213652	ARMCX2	NM_026139.3	NM_026139.3		67416	142372774	NM_026139.3	Armcx2	NP_080415.2	ILMN_1220398	006200630	S	3356	AGTCCCGTAGTCCTGTAGTCCTGTGGTTTGACTTGTGCTGCTTGGGTGGG	X	-	131338826-131338875	XqE3	Mus musculus armadillo repeat containing, X-linked 2 (Armcx2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	ALEX2; 3230401N03Rik; AI043003	ALEX2; 3230401N03Rik; AI043003
Mus musculus	RefSeq	ILMN_220572	ILMN_220572	ITPK1	NM_172584.3	NM_172584.3		217837	146198859	NM_172584.3	Itpk1	NP_766172.1	ILMN_2723920	001030605	S	2783	AAAACAGGGGGTGGGAAGCGTGGCCGCCTCTTGCACTGCTTTGTCTCCGG				12qE	Mus musculus inositol 1,3,4-triphosphate 5/6 kinase (Itpk1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways involving myo-inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached [goid 32957] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: 1D-myo-inositol 3,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP [goid 47325] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reactions: ATP + 1D-myo-inositol 1,3,4-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate and ATP + 1D-myo-inositol 1,3,4-trisphosphate = ADP + 1D-myo-inositol 1,3,4,6-tetrakisphosphate [goid 35300] [evidence IEA]	BC031182	BC031182
Mus musculus	RefSeq	ILMN_209368	ILMN_209368	ATG3	NM_026402.1	NM_026402.1		67841	13385889	NM_026402.1	Atg3	NP_080678.1	ILMN_2805580	000020142	S	1722	TGTCAGTAGAATAGTGGGACTTGAAGGGGAATCTTTGCTTGTATTGTGTC	16	+	45107579-45107628	16qB5	Mus musculus autophagy-related 3 (yeast) (Atg3), mRNA.	A ubiquitin ligase complex found in the cytoplasm [goid 153] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence ISO]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence ISO]	PC3-96; APG3; Atg3l; Apg3l; 2610016C12Rik	PC3-96; APG3; Atg3l; Apg3l; 2610016C12Rik
Mus musculus	RefSeq	ILMN_215635	ILMN_215635	CCND3	NM_007632.2	NM_007632.2		12445	126012528	NM_007632.2	Ccnd3	NP_031658.1	ILMN_3131063	000610717	A	1801	CACCCCTCCACCTCATCTTCATCAGAGCAGGGTTAGGTTGGGATGGATCG	17	+	47736459-47736508	17qC	Mus musculus cyclin D3 (Ccnd3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IDA]	AA682053; AW146355; 9230106B05Rik; AL024085; C78795	AA682053; AW146355; 9230106B05Rik; AL024085; C78795
Mus musculus	Riken	ILMN_204480	ILMN_204480	EDIL3	ri|B130017G07|PX00157N18|AK044978|2829					AK044978	Edil3		ILMN_1213628	004180059	S	2457	GGTCCAAGGTCAGCCACCAAAGGTATCCTGTTAAGGTGCAGAGACTGGGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186398	ILMN_186398	TMEM14C	NM_025387.2	NM_025387.2		66154	141803169	NM_025387.2	Tmem14c	NP_079663.1	ILMN_2472110	001010608	S	187	GTTTCGGCTATGCAGCCCTGGTTGCTACCGGTGGGATTATTGGCTATGCC	13	+	41113095-41113144	13qA3.3	Mus musculus transmembrane protein 14C (Tmem14c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			AU020193; HSPC194; 1110021D01Rik	AU020193; HSPC194; 1110021D01Rik
Mus musculus	RefSeq	ILMN_186398	ILMN_186398	TMEM14C	NM_025387.2	NM_025387.2		66154	141803169	NM_025387.2	Tmem14c	NP_079663.1	ILMN_2435206	004200348	S	695	CAGGCGGCTTCGTTATGATGCCTCGCCTTTCTGTACTCATAGCGGGGGTA	13	+	41117736-41117785	13qA3.3	Mus musculus transmembrane protein 14C (Tmem14c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			AU020193; HSPC194; 1110021D01Rik	AU020193; HSPC194; 1110021D01Rik
Mus musculus	RefSeq	ILMN_220010	ILMN_220010	SMPD3	NM_021491.3	NM_021491.3		58994	118130464	NM_021491.3	Smpd3	NP_067466.1	ILMN_2716389	000160066	S	4721	CTGCCCAGGACCTCTCAAGGGAAGCATAGCGAAGTGTACTAGCTTAGCAA	8	-	108776825-108776874	8qD3	Mus musculus sphingomyelin phosphodiesterase 3, neutral (Smpd3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The Golgi cisterna closest to the endoplasmic reticulum; the first processing compartment through which proteins pass after export from the ER [goid 137] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence TAS]; The regulated release of a peptide hormone from secretory granules [goid 30072] [evidence IMP]; The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IDA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	fro; AW537966; nSMase2; 4631433G07Rik; AI427456	fro; AW537966; nSMase2; 4631433G07Rik; AI427456
Mus musculus	RefSeq	ILMN_211185	ILMN_211185	DPH2	NM_026344.3	NM_026344.3		67728	141802472	NM_026344.3	Dph2	NP_080620.1	ILMN_2613389	004890167	S	788	ATGGTGCCTTCTATGTAGGGGCTTCTCAAGCAAGCTCGGACTCCAGCCTT	4	-	117563100-117563149	4qD2.1	Mus musculus DPH2 homolog (S. cerevisiae) (Dph2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9130020C19Rik; Dph2l2; AI467389	9130020C19Rik; Dph2l2; AI467389
Mus musculus	RefSeq	ILMN_211185	ILMN_211185	DPH2	NM_026344.3	NM_026344.3		67728	141802472	NM_026344.3	Dph2	NP_080620.1	ILMN_2701741	004810494	S	2168	GTGGCTGCTTTCAGGACTTTGTTGGGCTACATTGACTTAGTTAGACTTGT	4	-	117561556-117561605	4qD2.1	Mus musculus DPH2 homolog (S. cerevisiae) (Dph2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9130020C19Rik; Dph2l2; AI467389	9130020C19Rik; Dph2l2; AI467389
Mus musculus	RefSeq	ILMN_187662	ILMN_247390	GCAP14	NM_027045.1	NM_027045.1		72972	80861473	NM_027045.1	Gcap14	NP_081321.1	ILMN_2446047	001070021	S	7193	TCCTCTAATTATGTAATTGATTAAAGATTGTGTCTTCACCTTGTTGAATA	14	-	37688375-37688424	14qB	Mus musculus granule cell antiserum positive 14 (Gcap14), transcript variant 1, mRNA.				2900054P12Rik; AW108503; AI035535; 1700012P13Rik	2900054P12Rik; AW108503; AI035535; 1700012P13Rik
Mus musculus	RefSeq	ILMN_202137	ILMN_247390	GCAP14	NM_027045.1	NM_027045.1		72972	80861473	NM_027045.1	Gcap14	NP_081321.1	ILMN_1224992	002190368	S	1811	CTGGAGCCCATTGGGAGTGTCCATCCTGTTGGCAGCTATGAGTCCTCTGA	14	-	37751782-37751831	14qB	Mus musculus granule cell antiserum positive 14 (Gcap14), transcript variant 1, mRNA.				2900054P12Rik; AW108503; AI035535; 1700012P13Rik	2900054P12Rik; AW108503; AI035535; 1700012P13Rik
Mus musculus	RefSeq	ILMN_187662	ILMN_247390	GCAP14	NM_027045.1	NM_027045.1		72972	80861473	NM_027045.1	Gcap14	NP_081321.1	ILMN_2589502	007320717	S	2946	CAAGAGCCTCATCATTTGGCAGAGAAAAAACCTAGTGACTTGCAGTTTGT	14	-	37692622-37692671	14qB	Mus musculus granule cell antiserum positive 14 (Gcap14), transcript variant 1, mRNA.				2900054P12Rik; AW108503; AI035535; 1700012P13Rik	2900054P12Rik; AW108503; AI035535; 1700012P13Rik
Mus musculus	RefSeq	ILMN_213000	ILMN_213000	ATXN1	NM_009124.4	NM_009124.4		20238	145966747	NM_009124.4	Atxn1	NP_033150.2	ILMN_1254409	002450187	S	5037	CACCAGAAGCCAGGTCTGAGGGTCTTCTTCAGCGCCATTGAGAGTTTCCC				13qA5	Mus musculus ataxin 1 (Atxn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISO]; Intranuclear foci at which aggregated proteins have been sequestered [goid 42405] [evidence IDA]	Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43569] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]	C85907; Sca1; Atx1; Ataxin-1	C85907; Sca1; Atx1; Ataxin-1
Mus musculus	RefSeq	ILMN_190049	ILMN_190049	V1RB7	NM_053228.1	NM_053228.1		113855	16716538	NM_053228.1	V1rb7	NP_444458.1	ILMN_1254954	004260187	S	799	GGCTCAATATTGTACTGTGTCCAAATTATTTTGTGTCATAGCTATGCCAC	6	+	89664995-89665044	6qD1	Mus musculus vomeronasal 1 receptor, B7 (V1rb7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187827	ILMN_187827	UTX	NM_009483.1	NM_009483.1		22289	33859491	NM_009483.1	Utx	NP_033509.1	ILMN_2447456	002510364	S	4616	CCAGTTCTGCACCACTGCTATTTGTAGCTATCTCGTAAGGCTGCTGGCTG	X	+	17855835-17855884	XqA1.2-qA1.3	Mus musculus ubiquitously transcribed tetratricopeptide repeat gene, X chromosome (Utx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187827	ILMN_187827	UTX	NM_009483.1	NM_009483.1		22289	33859491	NM_009483.1	Utx	NP_033509.1	ILMN_2506528	006420309	S	4681	CAACCTTCCAAGTGTGGAGTGTCAACCAACTGGACGGGAGAGTACTGCTC	X	+	17855900-17855949	XqA1.2-qA1.3	Mus musculus ubiquitously transcribed tetratricopeptide repeat gene, X chromosome (Utx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_218772	ILMN_218772	4930401F20RIK	scl31803.11.1_75	NM_172895.1			27370369	NM_172895.1	4930401F20Rik		ILMN_2700002	004900717	S	2638	TCTCCCATAGAGACCAGAGCTAGATATAAGTTTATTGGTGAGGATGGGGC										
Mus musculus	RefSeq	ILMN_213452	ILMN_253468	C8G	NM_027062.1	NM_027062.1		69379	58037158	NM_027062.1	C8g	NP_081338.1	ILMN_2637180	003780601	S	914	GGGCTACCCTCAGAGAGTTCTGAGCATCCTGAATGCACTCTTGGAGTCTC	2	-	25354250-25354299	2qA3	Mus musculus complement component 8, gamma polypeptide (C8g), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow [goid 5579] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP23-47P18.13; 1700013L23Rik	RP23-47P18.13; 1700013L23Rik
Mus musculus	MEEBO	ILMN_192198	ILMN_192198	ASH2L	scl34988.19_284				8392928	NM_011791	Ash2l		ILMN_2485900	004120121	S	2	CCAGGGGTTAGGATCAAAGAATGATGAGGAGCCTGCCTTACGAGGATGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_259074	ILMN_259074	GM1587	NM_001033440.1	NM_001033440.1		380920	85701956	NM_001033440.1	Gm1587	NP_001028612.1	ILMN_2860057	004570612	S	437	GCATAGCTGTGAGGCCTGGGTGGAGGCCTGGGGAAGTCTATAAATGGAGA	14	-	76528967-76528977:76528978-76529016	14qD3	Mus musculus gene model 1587, (NCBI) (Gm1587), mRNA.					
Mus musculus	RefSeq	ILMN_221587	ILMN_221587	CLK4	NM_007714.2	NM_007714.2		12750	31982454	NM_007714.2	Clk4	NP_031740.1	ILMN_2851710	007050577	S	1780	GGCTTTTAGAATGCCCTTTGTGTCCAGTGATAAACGTGATTGGTCCCATC	11	+	51125075-51125124	11qB1.3	Mus musculus CDC like kinase 4 (Clk4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]	AI987988; C85119	AI987988; C85119
Mus musculus	RefSeq	ILMN_219361	ILMN_219361	ZBBX	NM_172515.2	NM_172515.2		213234	74315901	NM_172515.2	Zbbx	NP_766103.2	ILMN_2707676	003170139	S	2259	TACAGCCTTTGCTGTCACTTGGAGATTACAGCACGGATGAGGAAGAGGAT	3	-	74841938-74841987	3qE3	Mus musculus zinc finger, B-box domain containing (Zbbx), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4931432L23	4931432L23
Mus musculus	MEEBO	ILMN_187059	ILMN_187059	WHSC1	scl0107823.12_1				51710932	XM_132006	Whsc1		ILMN_1234959	003420095	S	1	GTCCATGTGTATCATGGTGTCACTGTATCCTGTTGAGATGTGAAATGCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]		
Mus musculus	Riken	ILMN_206988	ILMN_206988	4933417E08RIK	ri|4933417E08|PX00642M23|AK077171|1523					AK077171	4933417E08Rik		ILMN_2584195	000360541	S	1336	CTGCATAGCGGGTTCTAGGACAGCCAGAGCTATGTTAGCGAGACCGTGTC										
Mus musculus	RefSeq	ILMN_191972	ILMN_191972	V1RE2	NM_134191.1	NM_134191.1		171225	21717696	NM_134191.1	V1re2	NP_598952.1	ILMN_2823366	002470519	S	636	GAGGGTTCAACACACTCTCCACATTCATGCCTCCATCAGAAACTCTGCTG	17	+	20825107-20825156	17qA3.2	Mus musculus vomeronasal 1 receptor, E2 (V1re2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_197165	ILMN_197165	LOC195243	XM_111485.2	XM_111485.2			38074385	XM_111485.2	LOC195243		ILMN_1240250	004900608	S	1730	TGAGGGACCATGATGACCAAGAGGTGGGAAGACAAGAAACAAGAACCATC										
Mus musculus	RefSeq	ILMN_189703	ILMN_259373	CAST	NM_009817.3	NM_009817.3		12380	145966843	NM_009817.3	Cast	NP_033947.1	ILMN_2689756	007380735	S	2332	CAGTTAATGAATTTGGGTATCTGAATAGAAATTCTTCAGCTGGTGGATGG				13qC1	Mus musculus calpastatin (Cast), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence ISA]	 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of the enzyme calpain, which catalyzes of the preferential cleavage of Tyr-Xaa, Met-Xaa or Arg-Xaa with Leu or Val as the P2 residue [goid 30161] [evidence ISA]		
Mus musculus	RefSeq	ILMN_189703	ILMN_259373	CAST	NM_009817.3	NM_009817.3		12380	145966843	NM_009817.3	Cast	NP_033947.1	ILMN_2629959	004780403	S	187	GAGCAGTCAGCCTTCCAGACCACATGTTGGTGAAGCTGCCACAGCCACCA				13qC1	Mus musculus calpastatin (Cast), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence ISA]	 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of the enzyme calpain, which catalyzes of the preferential cleavage of Tyr-Xaa, Met-Xaa or Arg-Xaa with Leu or Val as the P2 residue [goid 30161] [evidence ISA]		
Mus musculus	RefSeq	ILMN_189703	ILMN_259373	CAST	NM_009817.3	NM_009817.3		12380	145966843	NM_009817.3	Cast	NP_033947.1	ILMN_2700186	003520164	S	2616	GTTTCTTAAAACACCAAAAATCCCAGAAAGCCTTTACAAACCTTTGCACT				13qC1	Mus musculus calpastatin (Cast), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence ISA]	 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of the enzyme calpain, which catalyzes of the preferential cleavage of Tyr-Xaa, Met-Xaa or Arg-Xaa with Leu or Val as the P2 residue [goid 30161] [evidence ISA]		
Mus musculus	RefSeq	ILMN_209649	ILMN_209649	RPA2	NM_011284.3	NM_011284.3		19891	110625960	NM_011284.3	Rpa2	NP_035414.3	ILMN_2602687	005310332	S	653	CCAGGAATGAGTGAGCCGGGGAACTTCAGCGGGAATAACTTCATGCCAGC	4	+	132332193-132332242	4qD2.3	Mus musculus replication protein A2 (Rpa2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [evidence ISO]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI325195; AA409079; AU020965; Rf-A2	AI325195; AA409079; AU020965; Rf-A2
Mus musculus	RefSeq	ILMN_209649	ILMN_209649	RPA2	NM_011284.3	NM_011284.3		19891	110625960	NM_011284.3	Rpa2	NP_035414.3	ILMN_2597840	003140239	S	1084	GAGGTTCAGAGGGAGATAGACAGTTGAGAAGGAAGTAAACCAGGACTGGA	4	+	132333963-132334012	4qD2.3	Mus musculus replication protein A2 (Rpa2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [evidence ISO]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI325195; AA409079; AU020965; Rf-A2	AI325195; AA409079; AU020965; Rf-A2
Mus musculus	RefSeq	ILMN_211802	ILMN_211802	MRPS16	NM_025440.2	NM_025440.2		66242	142386526	NM_025440.2	Mrps16	NP_079716.1	ILMN_2619671	000130753	S	190	GGGATGGCCGATTTGTGGAGCAGTTGGGCTCCTATGATCCACTACCCAAC	14	-	21211211-21211260	14qA3	Mus musculus mitochondrial ribosomal protein S16 (Mrps16), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	Mprs16; 1500011E11Rik	Mprs16; 1500011E11Rik
Mus musculus	RefSeq	ILMN_217416	ILMN_242085	BC030307	NM_001003939.2	NM_001003939.2		103220	145966778	NM_001003939.2	BC030307	NP_001003939.2	ILMN_2682970	000620767	S	1662	CTTCGTCATGGAGCTTCAGCACAGAGCCAACGGTAACCGGGCCAGCCTTA				10qC1	Mus musculus cDNA sequence BC030307 (BC030307), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			Gnn; Nt5dc3; MGC40847	Gnn; Nt5dc3; MGC40847
Mus musculus	MEEBO	ILMN_214143	ILMN_214143	AB030188	scl058173.2_102	NM_021373.1			12957489	NM_021373.1	AB030188		ILMN_2644762	007150328	S	633	AAGGTGTAGACATTCCTAGGGACATAGGAAAGATGGAGAGCTAGAGCTAG										
Mus musculus	RefSeq	ILMN_198744	ILMN_325984	4932429P05RIK	NM_001085511.1	NM_001085511.1		245509	148231240	NM_001085511.1	4932429P05Rik	NP_001078980.1	ILMN_1246506	002630398	S	2327	CATCTGAAGCTTTTGAACGTTGTCCATCTCATGGGGATGCTTCTGCTACC				XqC1	Mus musculus RIKEN cDNA 4932429P05 gene (4932429P05Rik), mRNA.				RP23-256C8.1	RP23-256C8.1
Mus musculus	Riken	ILMN_206265	ILMN_206265	SLC11A2	ri|D030025E18|PX00180G19|AK083478|4122					AK083478	Slc11a2		ILMN_2578829	007380358	S	3398	AACAAAACCAGGTCACGGGTCCCTCCCAGCAGCATTCCCAACCTGTGGTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [evidence IDA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IMP]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IDA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of cobalt (Co) ions from one side of a membrane to the other [goid 15087] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197066	ILMN_197066	A230065H16RIK	XM_354697.3	XM_354697.3		380787	94393146	XM_354697.3	A230065H16Rik	XP_354697.1	ILMN_1222045	000430136	S	367	AGGCATTCCCTGCTCCAGTAACAGATGCGGGTGTGGCAGGCTCTACTCTC	12	+	112650004-112650053	12qF1	PREDICTED: Mus musculus RIKEN cDNA A230065H16 gene (A230065H16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198765	ILMN_198765	LOC237036	XM_111961.2	XM_111961.2			38087312	XM_111961.2	LOC237036		ILMN_2532845	004590278	S	789	CTGGAACAGAGTAAACAAGCCTCCATACCCCAATACGAAAAAGCTGGAGA										
Mus musculus	RefSeq	ILMN_221988	ILMN_221988	OLFR1216	NM_146893.2	NM_146893.2		258895	121583726	NM_146893.2	Olfr1216	NP_667104.2	ILMN_2743091	006250563	S	191	TCCTGTCCTTCCTGGATGCTTGTGTCTCTTCTACTGTTACACCCAAGATG	2	-	88853979-88854028	2qE1	Mus musculus olfactory receptor 1216 (Olfr1216), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR233-9	MOR233-9
Mus musculus	RefSeq	ILMN_199339	ILMN_253448	GM1527	NM_001033479.3	NM_001033479.3		385263	146198550	NM_001033479.3	Gm1527	NP_001028651.1	ILMN_1248201	001570348	S	182	TCCATCGAACCTTGCTGTGCCAAGGCCCCGTGAAACTCAAATGTTTCCAG				3qA3	Mus musculus gene model 1527, (NCBI) (Gm1527), mRNA.				Gm1136	Gm1136
Mus musculus	RefSeq	ILMN_201499	ILMN_253448	GM1527	NM_001033479.3	NM_001033479.3		385263	146198550	NM_001033479.3	Gm1527	NP_001028651.1	ILMN_1223518	005870324	S	1454	CTACCGGAATAGCATCATCCATCTTATGGCTTCCTAGCTACCGCAAGGTG				3qA3	Mus musculus gene model 1527, (NCBI) (Gm1527), mRNA.				Gm1136	Gm1136
Mus musculus	RefSeq	ILMN_188059	ILMN_324926	LOC100046825	XR_033090.1	XR_033090.1		100046825	149251707	XR_033090.1	LOC100046825		ILMN_2449466	001770521	S	7622	GGTCCATTGTGTAAAACATAGTTTATCTTTGGATTCGTTGTTGTCTTTGG					PREDICTED: Mus musculus similar to protein kinase Myak-S (LOC100046825), misc RNA.					
Mus musculus	RefSeq	ILMN_199566	ILMN_251883	AK157302	XM_484225.5	XM_484225.5		432732	149263923	XM_484225.5	AK157302	XP_484225.3	ILMN_2535680	005260075	S	102	GTTGGTCCGCGCCACCGTGTGGGCCGTGAGCAAGAGAAAACTGCAGCCCA	13	+	21587186-21587235	13qA3.1	PREDICTED: Mus musculus cDNA sequence AK157302 (AK157302), mRNA.					
Mus musculus	RefSeq	ILMN_258690	ILMN_258690	PPP1R13L	NM_001010836.2	NM_001010836.2		333654	110625660	NM_001010836.2	Ppp1r13l	NP_001010836.1	ILMN_2923409	006130079	S	2772	AGCTGCCTTAAGCATTGGGGTGAGGTGGGGCTGGGGACCCTTGCAGGCAA				7qA3	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 13 like (Ppp1r13l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		wa3; Nkip1	wa3; Nkip1
Mus musculus	MEEBO	ILMN_223002	ILMN_223002	LOC280487	scl00280487.1_157				50233843	NM_183299	LOC280487		ILMN_2757958	004590681	S	3021	CATCCTGTGTTTTAAGTTGGTAAACAAATAATCTGCGCATGAGCCAAGGG										
Mus musculus	Riken	ILMN_205505	ILMN_205505	ALK	ri|D130039F03|PX00184C13|AK051358|2555					AK051358	Alk		ILMN_2573068	005420048	S	1984	GGTGATCAGGAACTAATTCCGAACATTAGCAAGTATGCCATAGCCCAGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence ISS]		
Mus musculus	RefSeq	ILMN_209981	ILMN_324891	1700011M02RIK	XM_001474336.1	XM_001474336.1		75443	149272068	XM_001474336.1	1700011M02Rik	XP_001474386.1	ILMN_2683951	002350600	S	258	CCAAGTTCTTCAGGAGAGGATGCCAATCAACCCGAGGCGGAGACCACTGG				XqD	PREDICTED: Mus musculus RIKEN cDNA 1700011M02 gene (1700011M02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209981	ILMN_324891	1700011M02RIK	XM_001474336.1	XM_001474336.1		75443	149272068	XM_001474336.1	1700011M02Rik	XP_001474386.1	ILMN_2601053	007510735	S	215	AGGTCCTGGAGGGGCCGCTTCCAGAGAGCTCTGGCACGCGTGTCCAAGTT				XqD	PREDICTED: Mus musculus RIKEN cDNA 1700011M02 gene (1700011M02Rik), mRNA.					
Mus musculus	MEEBO	ILMN_223910	ILMN_223910	FCER1A	scl014125.2_20				6753827	NM_010184	Fcer1a		ILMN_2771342	003420082	S	548	GCACCTACCACTGCAAGGGCTATCTTAGGCAGGTGAAATATGAATCTGAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of granulocyte macrophage colony-stimulating factor [goid 45425] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-3 [goid 45401] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; The regulated release of serotonin by a cell or group of cells. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells [goid 1820] [evidence IDA]; The regulated release of serotonin by a cell or group of cells. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells [goid 1820] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of type I hypersensitivity, a type of inflammatory response [goid 1812] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mast cell degranulation [goid 43306] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an immunoglobulin of the IgE isotype via the Fc region to initiate a change in cell activity [goid 19767] [evidence IDA]; Combining with an immunoglobulin of the IgE isotype via the Fc region to initiate a change in cell activity [goid 19767] [evidence IMP]; Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IDA]; Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IMP]		
Mus musculus	RefSeq	ILMN_229247	ILMN_229247	IKZF1	NM_001025597.1	NM_001025597.1		22778	71037386	NM_001025597.1	Ikzf1	NP_001020768.1	ILMN_3127790	002070070	A	5019	GGTGAGCCACAATTAAACTTGAGATGTACAGCCACCCAAACCCAGGAAGC	11	+	11672785-11672834	11qA1	Mus musculus IKAROS family zinc finger 1 (Ikzf1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [evidence IDA]	The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion [goid 48732] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	5832432G11Rik; mKIAA4227; KIAA4227; Zfpn1a1; LyF-1; Znfn1a1; hlk-1; Ikaros	5832432G11Rik; mKIAA4227; KIAA4227; Zfpn1a1; LyF-1; Znfn1a1; hlk-1; Ikaros
Mus musculus	RefSeq	ILMN_229247	ILMN_229247	IKZF1	NM_001025597.1	NM_001025597.1		22778	71037386	NM_001025597.1	Ikzf1	NP_001020768.1	ILMN_3051466	007000446	I	516	ACGAATGCTTGATGCCTCGGGAGAGAAAATGAATGGCTCCCACAGGGACC	11	+	11648399-11648448	11qA1	Mus musculus IKAROS family zinc finger 1 (Ikzf1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [evidence IDA]	The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion [goid 48732] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	5832432G11Rik; mKIAA4227; KIAA4227; Zfpn1a1; LyF-1; Znfn1a1; hlk-1; Ikaros	5832432G11Rik; mKIAA4227; KIAA4227; Zfpn1a1; LyF-1; Znfn1a1; hlk-1; Ikaros
Mus musculus	RefSeq	ILMN_215385	ILMN_215385	2810439F02RIK	NM_028341.2	NM_028341.2		72747	142353858	NM_028341.2	2810439F02Rik	NP_082617.1	ILMN_1216182	004670022	S	1739	GGAGGATTTTTCTGGCTACGACTTTGAAAACAGATTGCACGTCCGCATCC	18	+	12894527-12894527:12895183-12895231	18qA1	Mus musculus RIKEN cDNA 2810439F02 gene (2810439F02Rik), mRNA.				1700008N02Rik	1700008N02Rik
Mus musculus	RefSeq	ILMN_215385	ILMN_215385	2810439F02RIK	NM_028341.2	NM_028341.2		72747	142353858	NM_028341.2	2810439F02Rik	NP_082617.1	ILMN_1250576	007330228	S	1544	GCTCCTTGGTGCCATACACAAATGTCTAGGAAACTCACAAGATGCTCTTC	18	+	12891513-12891562	18qA1	Mus musculus RIKEN cDNA 2810439F02 gene (2810439F02Rik), mRNA.				1700008N02Rik	1700008N02Rik
Mus musculus	RefSeq	ILMN_231501	ILMN_231501	PECAM1	NM_001032378.1	NM_001032378.1		18613	74024914	NM_001032378.1	Pecam1	NP_001027550.1	ILMN_3147074	005670020	A	3076	ACGGTTTCCTAAGGTCTGAGCTGTTTCCCAGGGTGGGCTAGAGTGGGTGG	11	-	106515654-106515703	11qE1	Mus musculus platelet/endothelial cell adhesion molecule 1 (Pecam1), transcript variant 2, mRNA.	Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC102160; Cd31; Pecam; PECAM-1	MGC102160; Cd31; Pecam; PECAM-1
Mus musculus	RefSeq	ILMN_210964	ILMN_210964	MMD2	NM_175217.6	NM_175217.6		75104	153791750	NM_175217.6	Mmd2	NP_780426.1	ILMN_1252636	005960543	S	2034	GACAGGGTGCCTTATACTTTGTTCTAGTGCATTCCAAGGTGTTTCAGGGC				5qG2	Mus musculus monocyte to macrophage differentiation-associated 2 (Mmd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C88001; 4930518M15Rik	C88001; 4930518M15Rik
Mus musculus	RefSeq	ILMN_212117	ILMN_212117	C730048C13RIK	NM_177002.2	NM_177002.2		319800	31342564	NM_177002.2	C730048C13Rik	NP_795976.1	ILMN_2685022	000020730	S	55	TGCCTGCAGTGGAGAAGCGATGAGGGACACATGAAGAACAACCCTACTTA	19	-	8472046-8472095	19qA	Mus musculus RIKEN cDNA C730048C13 gene (C730048C13Rik), mRNA.				UST1R	UST1R
Mus musculus	RefSeq	ILMN_200986	ILMN_315332	EG667378	XM_001487807.1	XM_001487807.1		667378	149256383	XM_001487807.1	EG667378	XP_001487857.1	ILMN_1253195	003710280	S	330	AGTGGGGTCTTTAGAGGAGAGCAAGACTCGAAGGCTGTTTGCCCAGATAG	7	-	22456080-22456129	7qA3	PREDICTED: Mus musculus predicted gene, EG667378 (EG667378), mRNA.					
Mus musculus	RefSeq	ILMN_214896	ILMN_240875	GP1BB	NM_001001999.1	NM_001001999.1		14724	50345975	NM_001001999.1	Gp1bb	NP_001001999.1	ILMN_2653205	002680382	S	1624	AAGAGTTCTCTCTCACAGCCCCGCTGGTGGCCGAGTCGGCCAGAGGTGGT	16	-	19257656-19257705	16qA3	Mus musculus glycoprotein Ib, beta polypeptide (Gp1bb), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213243	ILMN_213243	NME7	NM_178071.4	NM_178071.4		171567	146198735	NM_178071.4	Nme7	NP_835172.1	ILMN_2727351	003130209	S	1700	GTTTGAGTCAATTGTGTGCATCTCCATCTGATACTCCAAGTTGTTTTGGA				1qH2.2	Mus musculus non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) (Nme7), transcript variant 2, mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]	Nm23-M7; D530024H21Rik; Nm23-r7	Nm23-M7; D530024H21Rik; Nm23-r7
Mus musculus	RefSeq	ILMN_219964	ILMN_251196	CEP164	NM_001081373.1	NM_001081373.1		214552	124487016	NM_001081373.1	Cep164	NP_001074842.1	ILMN_1250182	001850424	S	5762	TCGTTTCTTTGCTGTGGAATAAACCTCGAGCAGCCAGTTGGCTTTTTACC	9	-	45575203-45575252	9qA5.2	Mus musculus centrosomal protein 164 (Cep164), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA1052; KIAA1052; BC027092; D030051D21; MGC38792	mKIAA1052; KIAA1052; BC027092; D030051D21; MGC38792
Mus musculus	RefSeq	ILMN_199499	ILMN_199499	LOC383584	XM_357135.1	XM_357135.1			38073563	XM_357135.1	LOC383584		ILMN_1218975	005570554	S	175	CAGCAGCAGAGCTGGGTCCGGGTGTTCGGAAAGGCTGTGGCAACGTTAAA										
Mus musculus	RefSeq	ILMN_197951	ILMN_197951	LOC331511	XM_284737.2	XM_284737.2			38079817	XM_284737.2	LOC331511		ILMN_2529943	000630338	S	383	GACTGGTGTGAGATGGAATCTCAGGGTTGTTTTGATTTGCATTTCTCTGA										
Mus musculus	RefSeq	ILMN_217116	ILMN_228759	IL19	NM_001009940.1	NM_001009940.1		329244	57977320	NM_001009940.1	Il19	NP_001009940.1	ILMN_2679276	003940168	S	888	GAGCAATAGACAGCCCCTCTAACTTATTGTAAAGCGGCTTCTTCCAGGCC	1	-	132829318-132829367	1qE4	Mus musculus interleukin 19 (Il19), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; The chemical reactions and pathways resulting in the formation of interleukin-6 [goid 42226] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211979	ILMN_211979	1700129L04RIK	scl46803.4.1_191	NM_028588.1			15987829	NM_028588.1	1700129L04Rik		ILMN_1245773	002320477	S	1249	GTAGCCACCATGGAGAGAAGATGAGTGGCTAGCTCTGGCTTTGTAAATAC										
Mus musculus	RefSeq	ILMN_222659	ILMN_222659	MAP3K13	NM_172821.2	NM_172821.2		71751	95113637	NM_172821.2	Map3k13	NP_766409.2	ILMN_2893140	003360021	S	2765	AGCGCGGCTACGAGAACCCTGTGCAGTTTGGAGACTCGGACTGTGACTCT	16	+	21926530-21926543:21928020-21928055	16qB1	Mus musculus mitogen-activated protein kinase kinase kinase 13 (Map3k13), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]	C130026N12Rik; 1500026P21Rik; 1300002E11Rik; LZK	C130026N12Rik; 1500026P21Rik; 1300002E11Rik; LZK
Mus musculus	RefSeq	ILMN_209450	ILMN_209450	OLFR593	NM_146380.1	NM_146380.1		258378	22129544	NM_146380.1	Olfr593	NP_666492.1	ILMN_1243178	001820253	S	903	CCCCATTATTTATGGTGTGAGGACAAAGAAAATACGAAACAGATTCCTCA	7	+	110361278-110361327	7qE3	Mus musculus olfactory receptor 593 (Olfr593), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR24-2	MOR24-2
Mus musculus	RefSeq	ILMN_218789	ILMN_218789	CCNG2	NM_007635.3	NM_007635.3		12452	142378472	NM_007635.3	Ccng2	NP_031661.2	ILMN_2700233	006270382	S	2446	CCAGTGTTTGTAGTGTTAGTTTAAAGCAATTCTGTGTGGTGATGGAGCCA	5	+	93704893-93704942	5qE2	Mus musculus cyclin G2 (Ccng2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]		MGC113793	MGC113793
Mus musculus	RefSeq	ILMN_223598	ILMN_223598	1500010J02RIK	NM_026889.2	NM_026889.2		68964	61742799	NM_026889.2	1500010J02Rik	NP_081165.2	ILMN_3127704	006590441	A	3648	GCTTCGTCTTGATGACACTGCCTAAGGTGGCCCCAGAGTTTCCAGGACCC	11	+	68849658-68849669:68849670-68849707	11qB3	Mus musculus RIKEN cDNA 1500010J02 gene (1500010J02Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-19I2.2	RP23-19I2.2
Mus musculus	RefSeq	ILMN_223598	ILMN_223598	1500010J02RIK	NM_026889.2	NM_026889.2		68964	61742799	NM_026889.2	1500010J02Rik	NP_081165.2	ILMN_2766279	003060692	S	3887	CGGAGACCTTGCCCCTTATGATTGATTGTATTGTGATAGGCCCTTTGGGC	11	+	68849897-68849946	11qB3	Mus musculus RIKEN cDNA 1500010J02 gene (1500010J02Rik), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-19I2.2	RP23-19I2.2
Mus musculus	RefSeq	ILMN_211936	ILMN_211936	INPPL1	NM_010567.1	NM_010567.1		16332	33859565	NM_010567.1	Inppl1	NP_034697.1	ILMN_2620913	005670072	S	4685	GCGTCAGAGGACAGTGCTGCAGTTTATCCCACCTTGGGCACTCAGAAAGG	7	-	108971253-108971302	7qE3	Mus musculus inositol polyphosphate phosphatase-like 1 (Inppl1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]	SHIP2; 51C	SHIP2; 51C
Mus musculus	RefSeq	ILMN_211936	ILMN_211936	INPPL1	NM_010567.1	NM_010567.1		16332	33859565	NM_010567.1	Inppl1	NP_034697.1	ILMN_1215550	001990440	S	4683	GGCGTCAGAGGACAGTGCTGCAGTTTATCCCACCTTGGGCACTCAGAAAG	7	-	108971255-108971304	7qE3	Mus musculus inositol polyphosphate phosphatase-like 1 (Inppl1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]	SHIP2; 51C	SHIP2; 51C
Mus musculus	RefSeq	ILMN_211936	ILMN_211936	INPPL1	NM_010567.1	NM_010567.1		16332	33859565	NM_010567.1	Inppl1	NP_034697.1	ILMN_1258148	006900379	S	4020	CTATGAGGAGGGCCTGGTGCACAATGGCTGGGACGACCTGGAGTTTCTCA	7	-	108972027-108972076	7qE3	Mus musculus inositol polyphosphate phosphatase-like 1 (Inppl1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]	SHIP2; 51C	SHIP2; 51C
Mus musculus	RefSeq	ILMN_213492	ILMN_213492	ACTR2	NM_146243.1	NM_146243.1		66713	22122824	NM_146243.1	Actr2	NP_666355.1	ILMN_2637588	007320348	S	3525	GAGCACTATTAGTATCTATCTGACAAGTATTGGGAAGATCAATGGAAAGC	11	-	19962362-19962411	11qA3.1	Mus musculus ARP2 actin-related protein 2 homolog (yeast) (Actr2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC36604; D6Ertd746e; 4921510D23Rik; Arp2; AA409782	MGC36604; D6Ertd746e; 4921510D23Rik; Arp2; AA409782
Mus musculus	RefSeq	ILMN_220250	ILMN_224817	KRT33B	XM_904709.3	XM_904709.3		16671	149262618	XM_904709.3	Krt33b	XP_909802.2	ILMN_2719704	000520021	S	1525	GGACCATCTTCATCCAGGGCTTGTCCGTGACCACCGGCTTGTATCTGGTG				11qD	PREDICTED: Mus musculus keratin 33B (Krt33b), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220740	ILMN_220740	HEPH	NM_010417.1	NM_010417.1		15203	6754179	NM_010417.1	Heph	NP_034547.1	ILMN_2734252	002260382	S	3956	GCCATATGTGTGCTTCTGTTGCTCATTGCTCTGGCTCTTGGTGGTGTAGT	X	+	93769139-93769139:93769140-93769188	XqC3	Mus musculus hephaestin (Heph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence TAS]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Cpl; sla; C130006F04Rik; mKIAA0698	Cpl; sla; C130006F04Rik; mKIAA0698
Mus musculus	RefSeq	ILMN_222015	ILMN_220740	HEPH	NM_010417.1	NM_010417.1		15203	6754179	NM_010417.1	Heph	NP_034547.1	ILMN_1220453	000650192	S	629	GGCCATCTTCTCTGGGCTTTACTGTTGATGCACTCCTTGTGGTCTATACC	X	+	93658410-93658430:93661149-93661177	XqC3	Mus musculus hephaestin (Heph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence TAS]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Cpl; sla; C130006F04Rik; mKIAA0698	Cpl; sla; C130006F04Rik; mKIAA0698
Mus musculus	RefSeq	ILMN_220740	ILMN_220740	HEPH	NM_010417.1	NM_010417.1		15203	6754179	NM_010417.1	Heph	NP_034547.1	ILMN_2726128	002940020	S	4012	CCAGCATCGACAAAGAAAGCTTCGGCGCAACAGGAGGTCCATTCTTGATG	X	+	93769195-93769244	XqC3	Mus musculus hephaestin (Heph), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence TAS]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Cpl; sla; C130006F04Rik; mKIAA0698	Cpl; sla; C130006F04Rik; mKIAA0698
Mus musculus	RefSeq	ILMN_240687	ILMN_240687	TRAF3IP1	NM_028718.1	NM_028718.1		74019	63147417	NM_028718.1	Traf3ip1	NP_082994.1	ILMN_2990070	006280703	S	2312	CAGCAGGCCCAGAGTTCTGCTTTTGAGTCTCCCAGGACTCCATACTAGCA	1	+	93424705-93424754	1qD	Mus musculus TNF receptor-associated factor 3 interacting protein 1 (Traf3ip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat6 protein [goid 42527] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 51101] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]; Interacting selectively with monomeric or multimeric forms of tubulin, including microtubules [goid 15631] [evidence ISO]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]	AU041749; 3930402D05Rik; MGC143957; MIP-T3	AU041749; 3930402D05Rik; MGC143957; MIP-T3
Mus musculus	RefSeq	ILMN_194140	ILMN_194140	WBSCR27	NM_024479.2	NM_024479.2		79565	50355998	NM_024479.2	Wbscr27	NP_077799.2	ILMN_2518946	007510474	S	1403	CCAGTGTGTACTGTAACACAGCCAAGCACCATCCCATCCCCATTTTGCAA	5	+	135417107-135417156	5qG2	Mus musculus Williams Beuren syndrome chromosome region 27 (human) (Wbscr27), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AW492986; MGC8159; BC002286	AW492986; MGC8159; BC002286
Mus musculus	Riken	ILMN_207373	ILMN_207373	C230098K08RIK	ri|C230098K08|PX00667E02|AK082733|1780					AK082733	C230098K08Rik		ILMN_1249302	003180673	S	1430	TGGGTCTGGCCAAGTCAGAGACAGGTCTCCCTACCACAGTGGGGATTACA										
Mus musculus	Riken	ILMN_202453	ILMN_202453	4930568G15RIK	ri|4930568G15|PX00036C03|AK016251|1000					AK016251	4930568G15Rik		ILMN_1227170	006420735	S	716	CGTCATCGTCTTCACCACCCTCATGCCGACCAGAAGAGAGAAGTGTGCGC										
Mus musculus	Riken	ILMN_202914	ILMN_202914	4732469G06RIK	ri|4732469G06|PX00051E12|AK028911|2528					AK028911	4732469G06Rik		ILMN_1250067	003140014	S	2046	GGTGCAGCCACACTCTAAAAGCTGTAAATGCTAGGAGCTTGGGCGACTGT										
Mus musculus	MEEBO	ILMN_210031	ILMN_210031	BPNT1	scl000932.1_92	NM_011794.2			39652625	NM_011794.2	Bpnt1		ILMN_2601515	000110348	S	697	AGATCCCATAGCAACCAGCTGGTCACAGACTGCATTTCCGCCATGAACCC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate [goid 8441] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218467	ILMN_218467	PCDHB21	NM_053146.2	NM_053146.2		93892	84872174	NM_053146.2	Pcdhb21	NP_444376.1	ILMN_2696207	006380706	S	2543	GGATACAATTAGCAATTTGTTGACTCTCATCATGGTTCCTGATGTACACT	18	+	37675848-37675897	18qB3	Mus musculus protocadherin beta 21 (Pcdhb21), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbU; Pcdhb18	PcdhbU; Pcdhb18
Mus musculus	Riken	ILMN_204791	ILMN_204791	CACNA1C	ri|D330001M20|PX00190C17|AK052162|955					AK052162	Cacna1c		ILMN_1214863	007330102	S	847	CTTTGCCAGGGTGAAGAGGTTTAATTTTAGGGGAAATACCCGCTCCCTTG						A complex composed of proteins required for beta adrenergic receptor activation of protein kinase A. It includes the Cav 12. subunit of L-type calcium channel, protein kinase A regulatory subunit 2(PKAR2), adenyl cyclase, beta-adrenergic receptor, G-alpha-S, protein phosphatase 2A (PP2A) and caveolin 3 (CAV3) [goid 2095] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body [goid 60083] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IDA]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IMP]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP];  [goid 15270] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220808	ILMN_220808	MIXL1	NM_013729.2	NM_013729.2		27217	31543252	NM_013729.2	Mixl1	NP_038757.1	ILMN_2920173	004920064	S	1831	GCTCAGGAAACAGCTTCCCTTTCTGAAGCCTGAACTTTTCGTAAGTAATC	1	-	182623587-182623636	1qH4	Mus musculus Mix1 homeobox-like 1 (Xenopus laevis) (Mixl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48565] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IMP]; The formation of the endoderm during gastrulation [goid 1706] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mml; Mm1	Mml; Mm1
Mus musculus	RefSeq	ILMN_220808	ILMN_220808	MIXL1	NM_013729.2	NM_013729.2		27217	31543252	NM_013729.2	Mixl1	NP_038757.1	ILMN_1245893	003990181	S	1551	GTCAGCTAGACGCTCCCTCAGTAACAACGCTACTTTCCAGCTCTTTCAAG	1	-	182623867-182623916	1qH4	Mus musculus Mix1 homeobox-like 1 (Xenopus laevis) (Mixl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48565] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IMP]; The formation of the endoderm during gastrulation [goid 1706] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mml; Mm1	Mml; Mm1
Mus musculus	RefSeq	ILMN_199571	ILMN_199571	LOC383658	XM_357175.1	XM_357175.1			38074464	XM_357175.1	LOC383658		ILMN_2535697	007320523	S	829	TGCTCTCCCGTGCAGGACGTCCCCAAGAAGGAGCGCAAAGTCTCCAAGCT										
Mus musculus	RefSeq	ILMN_215967	ILMN_215967	KDR	NM_010612.2	NM_010612.2		16542	27777647	NM_010612.2	Kdr	NP_034742.2	ILMN_2665788	000520632	S	5377	TCTACTGTATCCTTTAGAATTTTAACCTATAAAACTATGTCTACTGGTTT	5	-	76329319-76329368	5qC3.3	Mus musculus kinase insert domain protein receptor (Kdr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; Any process involved in the maintenance of an equilibrium of the surface-active lipoprotein mixture which coats the alveoli [goid 43129] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 45446] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions [goid 55074] [evidence IDA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IDA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IPI]	VEGFR-2; Krd-1; Flk-1; VEGFR2; Ly73; Flk1; 6130401C07	VEGFR-2; Krd-1; Flk-1; VEGFR2; Ly73; Flk1; 6130401C07
Mus musculus	RefSeq	ILMN_214874	ILMN_214874	SEC11A	NM_019951.1	NM_019951.1		56529	9910549	NM_019951.1	Sec11a	NP_064335.1	ILMN_2652936	007320450	S	814	GCACCGTGGAGTGCACACAAGGGGACTGTCAATCACAGGGTTTCATATGT	7	-	88060514-88060563	7qD3	Mus musculus SEC11 homolog A (S. cerevisiae) (Sec11a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	18kDa; Sec11l1; Spc18; Sid2895p; 1810012E07Rik; sid2895	18kDa; Sec11l1; Spc18; Sid2895p; 1810012E07Rik; sid2895
Mus musculus	RefSeq	ILMN_189787	ILMN_257615	VARS2	NM_175137.3	NM_175137.3		68915	40254282	NM_175137.3	Vars2	NP_780346.2	ILMN_1251909	002340066	S	3579	CCACATTCCTCATTCTGTAGGAGGGAGCAGGTCGGAAAGTGCCACGATTC	17	-	35793375-35793424	17qB1	Mus musculus valyl-tRNA synthetase 2, mitochondrial (putative) (Vars2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6438] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-tRNA(Val) [goid 4832] [evidence IEA]	1190004I24Rik; Vars2l; mKIAA1885	1190004I24Rik; Vars2l; mKIAA1885
Mus musculus	Riken	ILMN_203904	ILMN_203904	MIL1-PENDING	ri|9430085I19|PX00110H11|AK035082|1784					AK035082	Mil1-pending		ILMN_1257037	005810520	S	1540	CATATGAGTGCTTGCCTCACAGGGAGGATCTGGGTTCAAGCCCCAGAACG										
Mus musculus	RefSeq	ILMN_208697	ILMN_208697	APH1B	NM_177583.4	NM_177583.4		208117	146198522	NM_177583.4	Aph1b	NP_808251.1	ILMN_2588682	006220612	S	4497	TTGAGGATTAGTTAGAATGGAGATTTCCTGATGACCACCCTCAGATGTGA				9qC	Mus musculus anterior pharynx defective 1b homolog (C. elegans) (Aph1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IGI]	Aph1c; 2310057K14Rik	Aph1c; 2310057K14Rik
Mus musculus	RefSeq	ILMN_196585	ILMN_196585	FV1	NM_010244.2	NM_010244.2			34328175	NM_010244.2	Fv1		ILMN_1232454	000510553	S	2358	CGAAATTCAAGACAGTCTATCAGAAGTAAAGTGGAATATGTTTGGCCTTG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]			
Mus musculus	RefSeq	ILMN_224541	ILMN_224541	SYTL2	NM_001040088.1	NM_001040088.1		83671	91718894	NM_001040088.1	Sytl2	NP_001035177.1	ILMN_3127335	003710563	A	2237	TCCCACACACACCCGGACTCCTGTAACCTCACCTTCTCAGTCTCAAATGG	7	+	97558600-97558649	7qE1	Mus musculus synaptotagmin-like 2 (Sytl2), transcript variant 5, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IPI]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IDA]	Slp2-d; AI266830; Slp2-a; mKIAA1597; Slp2-c; Slp2; KIAA1597; Slp2-b	Slp2-d; AI266830; Slp2-a; mKIAA1597; Slp2-c; Slp2; KIAA1597; Slp2-b
Mus musculus	RefSeq	ILMN_194666	ILMN_194666	ZFP92	NM_009566.4	NM_009566.4		22754	145966808	NM_009566.4	Zfp92	NP_033592.2	ILMN_2508485	001780278	S	2741	GCCCAAGCTCAGACAGGAGAAAGTAGCCTTTCCAGCCCATGACTGGTGAG				XqA7.3	Mus musculus zinc finger protein 92 (Zfp92), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191190	ILMN_259293	ETNK2	NM_175443.4	NM_175443.4		214253	146198602	NM_175443.4	Etnk2	NP_780652.1	ILMN_2612868	000130376	S	2154	CCACACACGGTTCTAGACTTGATGAGAGTTGGGCACAGCCTGCTTTTAAA				1qE4	Mus musculus ethanolamine kinase 2 (Etnk2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The chemical reactions and pathways resulting in the formation of phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine [goid 6646] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Eki2; AI197444; Tuc1; 4933417N20Rik	Eki2; AI197444; Tuc1; 4933417N20Rik
Mus musculus	RefSeq	ILMN_199201	ILMN_258665	GM53	XM_923886.2	XM_923886.2		193022	94390725	XM_923886.2	Gm53	XP_928979.1	ILMN_1238060	001570243	S	307	GCTTTGGACACTGAGCTTCGGAGGATCTGGCTGCGAGCTGATTCAACGCC				11qD	PREDICTED: Mus musculus gene model 53, (NCBI) (Gm53), mRNA.					
Mus musculus	RefSeq	ILMN_193191	ILMN_239253	TMED7	XM_990639.1	XM_990639.1		66676	94405459	XM_990639.1	Tmed7	XP_995733.1	ILMN_2494869	004290364	S	3506	AGGGTGGTCAGTGTTGCCATGTCAACTTCAATAGTTTCGGGTGTCATGGG					PREDICTED: Mus musculus transmembrane emp24 protein transport domain containing 7 (Tmed7), mRNA.					
Mus musculus	RefSeq	ILMN_193191	ILMN_239253	TMED7	XM_990639.1	XM_990639.1		66676	94405459	XM_990639.1	Tmed7	XP_995733.1	ILMN_1235110	002690661	S	1700	CTAGTTCTTGGTTGAGCCATTGCCAGCGTAGGTCAGCAGTTGTGAGCTCG					PREDICTED: Mus musculus transmembrane emp24 protein transport domain containing 7 (Tmed7), mRNA.					
Mus musculus	RefSeq	ILMN_213181	ILMN_213181	RAB27B	NM_030554.3	NM_030554.3		80718	127138857	NM_030554.3	Rab27b	NP_085031.3	ILMN_1252678	002360167	S	2171	GCTATAGTTGAGGTGTACCTAAGAAATTAGCAAGAATGGATCTGCGTCTC	18	-	70143541-70143590	18qE2	Mus musculus RAB27b, member RAS oncogene family (Rab27b), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310021G14Rik; B130064M09Rik	2310021G14Rik; B130064M09Rik
Mus musculus	RefSeq	ILMN_213181	ILMN_213181	RAB27B	NM_030554.3	NM_030554.3		80718	127138857	NM_030554.3	Rab27b	NP_085031.3	ILMN_3076491	001190706	I	18	CTTGCCACTTGCAGTCTTGACAGGCAGAGGTTGGGGACTGTCTGGCCTTG	18	-	70212956-70213005	18qE2	Mus musculus RAB27b, member RAS oncogene family (Rab27b), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310021G14Rik; B130064M09Rik	2310021G14Rik; B130064M09Rik
Mus musculus	RefSeq	ILMN_213181	ILMN_213181	RAB27B	NM_030554.3	NM_030554.3		80718	127138857	NM_030554.3	Rab27b	NP_085031.3	ILMN_2634501	000110477	S	2379	ATCAAATAATATTTAAAATTGTCAATCAATTTTACCAATAACAAAGCCAA	18	-	70143333-70143382	18qE2	Mus musculus RAB27b, member RAS oncogene family (Rab27b), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310021G14Rik; B130064M09Rik	2310021G14Rik; B130064M09Rik
Mus musculus	RefSeq	ILMN_220467	ILMN_220467	PEX13	NM_023651.4	NM_023651.4		72129	146141219	NM_023651.4	Pex13	NP_076140.2	ILMN_1217360	003190563	S	3605	CTCAAGTCTTAGCCAATTATTCATTTACCTGAGTGCAGCGGCTCTTTATT				11qA3.2	Mus musculus peroxisomal biogenesis factor 13 (Pex13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence ISO]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process by which a complex formed of a peroxisome targeting sequence (PTS) receptor bound to a PTS-bearing protein docks with translocation machinery in the preoxisomal membrane [goid 16560] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; Pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway [goid 1561] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The microtubule-based process by which a peroxisome is transported to, and/or maintained in, a specific location. A peroxisome is a small membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 60152] [evidence IMP]	Interacting selectively with a peroxisomal targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome [goid 268] [evidence TAS]	2610008O20Rik	2610008O20Rik
Mus musculus	MEEBO	ILMN_223788	ILMN_223788	SEMA4F	scl28810.15.13_21				31543684	NM_011350	Sema4f		ILMN_1255851	005270070	S	3476	GGACCATGGTCCATAGTCACCACACTTGGGCCACATAAATGGAGGAGGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence ISA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence ISA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_195344	ILMN_195344	TRAV6D-3_AF259073_T_CELL_RECEPTOR_ALPHA_VARIABLE_6D-3_12	TRAV6D-3_AF259073_T_cell_receptor_alpha_variable_6D-3_12						TRAV6D-3_AF259073_T_cell_receptor_alpha_variable_6D-3_12		ILMN_2514749	007610376	S	18	GATGCTGTTTATACTTGGGAGGACCCATGGAGACTCAGTGATCCAGATGC										
Mus musculus	RefSeq	ILMN_187806	ILMN_187806	TRPC4	NM_016984.2	NM_016984.2		22066	118131192	NM_016984.2	Trpc4	NP_058680.1	ILMN_1221193	003060398	S	3291	GCCTGCTTTTGCTTTCACCGTTGATTTTACAAGTGTTTCTGTTAAATAAA	3	+	54122258-54122307	3qC	Mus musculus transient receptor potential cation channel, subfamily C, member 4 (Trpc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IPI]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulated release of gamm-aminobutyric acid by a cell or group of cells. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues [goid 14051] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 15279] [evidence IMP]	Trrp4; CCE1; Trp4; STRPC4	Trrp4; CCE1; Trp4; STRPC4
Mus musculus	MEEBO	ILMN_195828	ILMN_195828	SCL0003067.1_7	scl0003067.1_7	AK049101.1			26339759	AK049101.1	scl0003067.1_7		ILMN_2519110	002190201	S	12	AATCCTGCCTCATACGCCGAGGCTCACTCACTTTCCCACAGTCTCGGGCT										
Mus musculus	RefSeq	ILMN_221494	ILMN_237369	2610002J02RIK	NM_001033134.2	NM_001033134.2		67513	142381159	NM_001033134.2	2610002J02Rik	NP_001028306.1	ILMN_2736360	005050445	S	1017	GGTGCCTTGCTGTATCTCCTTCAAACCTACACACCGACATTGGATGTGGC	4	+	154630324-154630373	4qE2	Mus musculus RIKEN cDNA 2610002J02 gene (2610002J02Rik), mRNA.					
Mus musculus	MEEBO	ILMN_191102	ILMN_191102	B130019G13RIK	scl0100633.1_98						B130019G13Rik		ILMN_1236649	006420497	S	3	GCCTCTTCGCTACTACTGACTGTGATCTACTGCACGTGACTTCCCCGAGC										
Mus musculus	RefSeq	ILMN_187607	ILMN_232988	9630009A06RIK	XM_984668.1	XM_984668.1		78568	94398438	XM_984668.1	9630009A06Rik	XP_989762.1	ILMN_1252627	004290471	S	452	GTGAGGAGAAAGAACACTGGACAAATGCTATAGGTGACTGGTTTAAATTA	15	-	30891366-30891415	15qB2	PREDICTED: Mus musculus RIKEN cDNA 9630009A06 gene (9630009A06Rik), mRNA.					
Mus musculus	Riken	ILMN_204746	ILMN_204746	B930055O11RIK	ri|B930055O11|PX00164D06|AK047401|1860					AK047401	B930055O11Rik		ILMN_1253076	002970180	S	1562	ATCAACTGGCTCCAACTGGCTGTAACTCCAACTCTGGGGAATCCGAGGCC										
Mus musculus	Riken	ILMN_204271	ILMN_204271	ADAT1	ri|9530077F23|PX00114O19|AK035614|1816					AK035614	Adat1		ILMN_2563701	006900619	S	1661	TTATCATTTGCCTGATTGGCTGACAGGATGCTGGGATGGAAGCCAAGGCC							The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a tRNA molecule [goid 8251] [evidence ISS]		
Mus musculus	RefSeq	ILMN_195695	ILMN_261783	LOC674229	XM_972971.1	XM_972971.1		674229	94367490	XM_972971.1	LOC674229	XP_978065.1	ILMN_1221330	006130347	S	1972	CCTTGCTCTCTTTCCTCTTGTGTTGTTTATATAAATGTTAGTGGACTCTG					PREDICTED: Mus musculus similar to cysteine and glycine-rich protein 2 binding protein (LOC674229), mRNA.					
Mus musculus	RefSeq	ILMN_193127	ILMN_238803	EVC	NM_021292.1	NM_021292.1		59056	10947019	NM_021292.1	Evc	NP_067267.1	ILMN_2706562	006280050	S	4087	GTTCTTAGGAAACACCTCTCGAGGAACACCATCGTGTCTAGGAGTGACGT	5	-	37690565-37690614	5qB3	Mus musculus Ellis van Creveld gene homolog (human) (Evc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_190695	ILMN_190695	ZCCHC12	NM_028325.2	NM_028325.2		72693	141803251	NM_028325.2	Zcchc12	NP_082601.1	ILMN_1213337	001260601	S	1681	ATCCACAAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAG	X	+	33738729-33738778	XqA3.3	Mus musculus zinc finger, CCHC domain containing 12 (Zcchc12), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AV136720; 2810028A01Rik	AV136720; 2810028A01Rik
Mus musculus	Riken	ILMN_204223	ILMN_204223	MASP1	ri|A730051H16|PX00151C09|AK043055|2025					AK043055	Masp1		ILMN_1250760	006040373	S	1749	GGGTTTATAGACTGAATGATGACACAGAGTGTGGATGTGGGCGAGTCTGG							Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210902	ILMN_210902	KIF20A	NM_009004.2	NM_009004.2		19348	31982078	NM_009004.2	Kif20a	NP_033030.1	ILMN_2610369	006040327	S	3249	AGGCTAGCTCCTAACCACAGAATGATCTATAGCACCTACTGCACAAGCTC	18	+	34757913-34757962	18qB1	Mus musculus kinesin family member 20A (Kif20a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Rab6kifl; AA415432	Rab6kifl; AA415432
Mus musculus	RefSeq	ILMN_253698	ILMN_253698	OLFR503	NM_001011527.1	NM_001011527.1		259143	58372131	NM_001011527.1	Olfr503	NP_001011527.1	ILMN_2890762	003850634	S	794	CCCACCACTTTGGGGGGCACACAATCCCTCCATCTTGCCACATCATTGTG	7	+	115688834-115688883	7qE3	Mus musculus olfactory receptor 503 (Olfr503), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR34-12; MOR34-8P	MOR34-12; MOR34-8P
Mus musculus	Riken	ILMN_204103	ILMN_204103	A730020L03RIK	ri|A730020L03|PX00149F14|AK042743|2950					AK042743	A730020L03Rik		ILMN_2562392	007040433	S	2279	CCAGTGTCATCGCACATGTCACAGCCTGCCGGAAATACAAACGGCCAATG										
Mus musculus	RefSeq	ILMN_209471	ILMN_244514	2810474O19RIK	NM_026054.2	NM_026054.2		67246	118129885	NM_026054.2	2810474O19Rik	NP_080330.1	ILMN_2596077	004920647	S	1529	GGCTTTAAGCAGCAGTGGCAGAACCCTAATGAGAAAGTCAGCATTGGACA	6	+	149274925-149274974	6qG3	Mus musculus RIKEN cDNA 2810474O19 gene (2810474O19Rik), mRNA.				AA536804; KIAA1551; AU020969; GET; mKIAA1551; 6720435I21Rik	AA536804; KIAA1551; AU020969; GET; mKIAA1551; 6720435I21Rik
Mus musculus	RefSeq	ILMN_209471	ILMN_244514	2810474O19RIK	NM_026054.2	NM_026054.2		67246	118129885	NM_026054.2	2810474O19Rik	NP_080330.1	ILMN_2685055	003360358	S	3932	CCAGTAAAAGCACCTATAGAACTTTCGTCAAACACAGATCCGTGCAGGAG	6	+	149277328-149277377	6qG3	Mus musculus RIKEN cDNA 2810474O19 gene (2810474O19Rik), mRNA.				AA536804; KIAA1551; AU020969; GET; mKIAA1551; 6720435I21Rik	AA536804; KIAA1551; AU020969; GET; mKIAA1551; 6720435I21Rik
Mus musculus	RefSeq	ILMN_209471	ILMN_244514	2810474O19RIK	NM_026054.2	NM_026054.2		67246	118129885	NM_026054.2	2810474O19Rik	NP_080330.1	ILMN_2712712	003940719	S	4691	GAACGGGAAAGCATATGTCTCACCAAATTGGATAGTGCATCCAAGAAGCT	6	+	149278087-149278136	6qG3	Mus musculus RIKEN cDNA 2810474O19 gene (2810474O19Rik), mRNA.				AA536804; KIAA1551; AU020969; GET; mKIAA1551; 6720435I21Rik	AA536804; KIAA1551; AU020969; GET; mKIAA1551; 6720435I21Rik
Mus musculus	RefSeq	ILMN_221273	ILMN_228966	PRSS32	NM_027220.1	NM_027220.1		69814	58037178	NM_027220.1	Prss32	NP_081496.1	ILMN_1237586	004560133	S	837	CTGATTGTGCTCTGTTCAAGAGGCCAGGTGTTTACACCAACGTCAGTGTC	17	+	23996120-23996169	17qA3.3	Mus musculus protease, serine, 32 (Prss32), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IDA]	mT5; 2010001P08Rik; tryptase-5	mT5; 2010001P08Rik; tryptase-5
Mus musculus	Riken	ILMN_202004	ILMN_202004	2010312A17RIK	ri|2010312A17|ZX00044B03|AK008565|994					AK008565	2010312A17Rik		ILMN_1213034	002680142	S	328	CAGGTGCAGAACAACTTCGCAGCCCACAGCCGCCGCTTGACAGAACTCCT										
Mus musculus	RefSeq	ILMN_211797	ILMN_211797	AI428936	NM_153577.2	NM_153577.2		233066	89886478	NM_153577.2	AI428936	NP_705805.1	ILMN_2619639	000110717	S	1252	GGCTGGCTAGGACGCCCTACCTGGTGCTCAGTTATGTCAATGGTCTCCCT	7	+	31103962-31104011	7qB1	Mus musculus expressed sequence AI428936 (AI428936), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	0610012K07Rik; MGC38513	0610012K07Rik; MGC38513
Mus musculus	RefSeq	ILMN_217685	ILMN_217685	SLC30A8	NM_172816.1	NM_172816.1		239436	27370217	NM_172816.1	Slc30a8	NP_766404.1	ILMN_2841384	004590520	S	1485	GCAGCAAAGTTTCTGCAATGCACAATGAGGCAGCCGTCGGAATAGATTTG	15	+	52165395-52165444	15qC	Mus musculus solute carrier family 30 (zinc transporter), member 8 (Slc30a8), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	C820002P14Rik; ZnT-8	C820002P14Rik; ZnT-8
Mus musculus	RefSeq	ILMN_223220	ILMN_223220	IMPACT	NM_008378.2	NM_008378.2		16210	118130830	NM_008378.2	Impact	NP_032404.1	ILMN_2760977	001780132	S	3083	GCATCCACGTAGACGGGCAGAGCAGAAGCTGCTAGTGAGGTGTCTGTCAG	18	+	13150032-13150081	18qA1	Mus musculus imprinted and ancient (Impact), mRNA.		Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E430016J11Rik	E430016J11Rik
Mus musculus	RefSeq	ILMN_195630	ILMN_223220	IMPACT	NM_008378.2	NM_008378.2		16210	118130830	NM_008378.2	Impact	NP_032404.1	ILMN_2517290	000770719	S	28	GCCAGTCGTCTCTTTCGGATTTGGGCATTTGGAGCTGGTGTCGCAGATCC	18	+	13130779-13130828	18qA1	Mus musculus imprinted and ancient (Impact), mRNA.		Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	E430016J11Rik	E430016J11Rik
Mus musculus	MEEBO	ILMN_217088	ILMN_217088	MLL5	scl0069188.1_256				51710848	XM_485570	Mll5		ILMN_1217776	004200706	S	2088	GAAAGCTTTCTCCATTGAGGCTGTCGGTGTCAAACAACCAGGAACCAGAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214817	ILMN_315717	2810410L24RIK	XR_035443.1	XR_035443.1		76377	149262574	XR_035443.1	2810410L24Rik		ILMN_2652286	006560044	S	1188	TCAGGTTATAAAGAAACTATACCTGGGCCGCCAGCCTCCCTTTCGGATCT	11	+	120047844-120047893	11qE2	PREDICTED: Mus musculus RIKEN cDNA 2810410L24 gene (2810410L24Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_228057	ILMN_228057	LCA5	NM_027448.1	NM_027448.1		75782	68299756	NM_027448.1	Lca5	NP_081724.1	ILMN_3097107	003450709	A	916	GAAAAAGATCTCCGAGGCCAGACACCTACCGGAGCGAGACGATTTGGCCA	9	-	83316682-83316731	9qE2	Mus musculus Leber congenital amaurosis 5 (human) (Lca5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		ORF64; AV274874; 4930431B11Rik; 5730406O13Rik	ORF64; AV274874; 4930431B11Rik; 5730406O13Rik
Mus musculus	RefSeq	ILMN_228057	ILMN_228057	LCA5	NM_027448.1	NM_027448.1		75782	68299756	NM_027448.1	Lca5	NP_081724.1	ILMN_3024416	005690241	I	3595	GCCATGGTACTTGATAAGACCTTCCCTGGTCGGTCCTGATTCACAGCCGT	9	-	83287541-83287590	9qE2	Mus musculus Leber congenital amaurosis 5 (human) (Lca5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		ORF64; AV274874; 4930431B11Rik; 5730406O13Rik	ORF64; AV274874; 4930431B11Rik; 5730406O13Rik
Mus musculus	MEEBO	ILMN_218882	ILMN_218882	1700022L20RIK	scl074236.1_134	XM_135684.3			38077478	XM_135684.3	1700022L20Rik		ILMN_2701398	005220039	S	886	TCTCCTTACCCTGAAGGGGAAAGCAGGCCTTGGAAGATGACATGGTCTCA										
Mus musculus	RefSeq	ILMN_200663	ILMN_200663	LOC381800	XM_358654.1	XM_358654.1			38084979	XM_358654.1	LOC381800		ILMN_2539561	003850739	S	274	CGCGCTGAGCCATGGGAATGTCCCAAGAAGCCATGAGACAATAAAGCGAG										
Mus musculus	RefSeq	ILMN_210200	ILMN_210200	OLFR972	NM_146610.1	NM_146610.1		258603	33239217	NM_146610.1	Olfr972	NP_666821.1	ILMN_2603196	002230445	S	464	GTGCCACAACTCAAACAGTCTGCATGTTAAGAGTGGATTTCTGTAACGCC	9	+	39681325-39681374	9qA5.1	Mus musculus olfactory receptor 972 (Olfr972), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR171-17	MOR171-17
Mus musculus	RefSeq	ILMN_188488	ILMN_255740	RCOR1	NM_198023.2	NM_198023.2		217864	118130783	NM_198023.2	Rcor1	NP_932140.1	ILMN_1215969	000110154	S	2564	CAGAATCACTTTTGCTCTCTTACCAGACTGTGGGCCTGAAGGGCCTGAGG	12	+	112351439-112351488	12qF1	Mus musculus REST corepressor 1 (Rcor1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	5730409O11; AU042633; mKIAA0071; D12Wsu95e; 6720480E22Rik	5730409O11; AU042633; mKIAA0071; D12Wsu95e; 6720480E22Rik
Mus musculus	MEEBO	ILMN_185572	ILMN_185572	RAD23B	scl25416.13_37				31543572	NM_009011	Rad23b		ILMN_2761120	006940672	S	2476	GGAGTCAAACTGCTGCCTTTAAAAAAACACACAAAAAGCTGATTCAGTTC						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185572	ILMN_185572	RAD23B	scl25416.13_37				31543572	NM_009011	Rad23b		ILMN_2428164	005390482	S	16	TGAGACTATTGAAGGAAGTAACGTCCCACCGTCGTGATGCTGTGTGAGAA						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219059	ILMN_219059	LRP12	NM_172814.3	NM_172814.3		239393	146198609	NM_172814.3	Lrp12	NP_766402.1	ILMN_2703738	006860255	S	3447	GGGGTAATGTCTTTCCCTGACACGGAGGTTTGCCTGAGTTGGACCCTAGG				15qB3.1	Mus musculus low density lipoprotein-related protein 12 (Lrp12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C820005L12Rik; AI848829	C820005L12Rik; AI848829
Mus musculus	RefSeq	ILMN_193926	ILMN_192063	USH1C	NM_153677.1	NM_153677.1		72088	41281801	NM_153677.1	Ush1c	NP_710143.1	ILMN_2501719	002600431	S	2991	GCCCCACTTCCTGCTATAATCCCTGATGAAAACCTGACGGTGAACTCACT	7	-	53450745-53450794	7qB4	Mus musculus Usher syndrome 1C homolog (human) (Ush1c), transcript variant b3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Assembly of actin filament bundles in which the filaments are tightly packed (approximately 10-20 nm apart) and oriented with the same polarity [goid 30046] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	harmonin; 2010016F01Rik	harmonin; 2010016F01Rik
Mus musculus	RefSeq	ILMN_192063	ILMN_192063	USH1C	NM_153677.1	NM_153677.1		72088	41281801	NM_153677.1	Ush1c	NP_710143.1	ILMN_2484636	003130156	S	17	CCCCAGCTGGCCCGAAAGCAGCTTGAAGCCTATGAGCCCGTGTGTAGACA	7	-	53485497-53485501:53493799-53493834:53493835-53493843	7qB4	Mus musculus Usher syndrome 1C homolog (human) (Ush1c), transcript variant b3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Assembly of actin filament bundles in which the filaments are tightly packed (approximately 10-20 nm apart) and oriented with the same polarity [goid 30046] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	harmonin; 2010016F01Rik	harmonin; 2010016F01Rik
Mus musculus	Riken	ILMN_205246	ILMN_205246	E230017C09RIK	ri|E230017C09|PX00210E03|AK054085|1617					AK054085	E230017C09Rik		ILMN_1235415	002750142	S	1236	CCGACACTCATTCATGGTCCTATGTTGCTCCCTAACCAAAGGGGCAGGGC										
Mus musculus	RefSeq	ILMN_257708	ILMN_257708	TSC22D3	NM_001077364.1	NM_001077364.1		14605	116517337	NM_001077364.1	Tsc22d3	NP_001070832.1	ILMN_3150811	006840382	A	1972	TGATCCCTTTGGGGTGTGGAAAATGTACCCAGGAAGCTTGTGTAAGGAGG	X	-	137074194-137074243	XqF1	Mus musculus TSC22 domain family, member 3 (Tsc22d3), transcript variant 1, mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	DIP; Gilz; Dsip1; Tilz3; TSC-22R	DIP; Gilz; Dsip1; Tilz3; TSC-22R
Mus musculus	RefSeq	ILMN_232099	ILMN_232099	MSH3	NM_010829.2	NM_010829.2		17686	68299762	NM_010829.2	Msh3	NP_034959.2	ILMN_3068452	000540102	I	2233	TATGATTGAAATAAAGAACTCGGCTGTATCTTGCATCCCAGCTGATTGGG	13	-	93035894-93035943	13qC3	Mus musculus mutS homolog 3 (E. coli) (Msh3), mRNA. XM_922668 XM_922672 XM_922677 XM_922681		Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with damaged DNA [goid 3684] [evidence IGI]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IDA]	Rep-3; D13Em1; Rep3	Rep-3; D13Em1; Rep3
Mus musculus	RefSeq	ILMN_210960	ILMN_210960	HSCB	NM_153571.1	NM_153571.1		100900	23956361	NM_153571.1	Hscb	NP_705799.1	ILMN_2740652	000670278	S	691	GATCAAGCTAAGCAAGACTCCTCTCTAGTTGCTAACTTAAAGTTTTAGAA	5	-	111258116-111258138:111258139-111258165	5qF	Mus musculus HscB iron-sulfur cluster co-chaperone homolog (E. coli) (Hscb), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI325508; AW049829; MGC41340; Hsc20	AI325508; AW049829; MGC41340; Hsc20
Mus musculus	RefSeq	ILMN_210960	ILMN_210960	HSCB	NM_153571.1	NM_153571.1		100900	23956361	NM_153571.1	Hscb	NP_705799.1	ILMN_2611037	001050524	S	485	AGTCAGTTCCTTGTGGAAATCATGGAAATCAATGAAAGACTCGCAGACGC	5	-	111263717-111263766	5qF	Mus musculus HscB iron-sulfur cluster co-chaperone homolog (E. coli) (Hscb), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI325508; AW049829; MGC41340; Hsc20	AI325508; AW049829; MGC41340; Hsc20
Mus musculus	MEEBO	ILMN_188949	ILMN_188949	ZFP393	scl0075753.2_78	NM_029416.1			21313067	NM_029416.1	Zfp393		ILMN_1225165	006580112	S	1	GCCTAGGCTGACTAGCAGCTTTCCTGTATTTGCCTGGAAAGTTCTGGAGT										
Mus musculus	RefSeq	ILMN_223373	ILMN_223373	RNASE1	NM_011271.2	NM_011271.2		19752	31981519	NM_011271.2	Rnase1	NP_035401.2	ILMN_1220763	002190039	S	633	GTTAGGACTTCCATATGACAAAACATGCGTTCCTGTCCTGTGTCATGCTC	14	-	51764964-51765013	14qC1	Mus musculus ribonuclease, RNase A family, 1 (pancreatic) (Rnase1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Rib-1; AI574248; Rib1	Rib-1; AI574248; Rib1
Mus musculus	MEEBO	ILMN_220096	ILMN_220096	CHRNA9	scl27759.9.1_172	XM_132045.2			38081752	XM_132045.2	Chrna9		ILMN_2717580	001660221	S	1352	CTCAAGGACCACAAGGCCACCAACTCCAAGGGCAGCGAGTGGAAGAAGGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IMP]		
Mus musculus	RefSeq	ILMN_258531	ILMN_258531	A230107C01RIK	NM_001039721.1	NM_001039721.1		320225	89886436	NM_001039721.1	A230107C01Rik	NP_001034810.1	ILMN_2824582	002260064	S	2128	TTGTCTCTGGTACTGGCGGATCCTGAGTGCCTTTCAGTAACTGCGACTCG				7qB1	Mus musculus RIKEN cDNA A230107C01 gene (A230107C01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_195034	ILMN_325359	WHSC1L1	NM_001001735.1	NM_001001735.1		234135	48958536	NM_001001735.1	Whsc1l1	NP_001001735.1	ILMN_2511971	003990743	S	3508	CGCGGCTGTCTCTGTCTAGCCTACCGCATTAGCCCAAGAGATTATTGCTT	8	+	26788322-26788371	8qA2	Mus musculus Wolf-Hirschhorn syndrome candidate 1-like 1 (human) (Whsc1l1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI528490; WHISTLE; NSD3; 6720429E03; A530023P05	AI528490; WHISTLE; NSD3; 6720429E03; A530023P05
Mus musculus	RefSeq	ILMN_206919	ILMN_325359	WHSC1L1	NM_001001735.1	NM_001001735.1		234135	48958536	NM_001001735.1	Whsc1l1	NP_001001735.1	ILMN_2583684	001940189	S	2471	CTCCAGACTTGGAGTCTCCGTGCAAGAGTTCTTTGTCGGCGGCTCGATAA	8	+	26787285-26787334	8qA2	Mus musculus Wolf-Hirschhorn syndrome candidate 1-like 1 (human) (Whsc1l1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI528490; WHISTLE; NSD3; 6720429E03; A530023P05	AI528490; WHISTLE; NSD3; 6720429E03; A530023P05
Mus musculus	MEEBO	ILMN_209394	ILMN_209394	PLD1	scl23337.33_353	XM_130807.1			20864822	XM_130807.1	Pld1		ILMN_2595408	001030270	S	4459	GCTCCCTCTCAGCTGGTATTATGCCCTTTGTAGACCAAATTTCAGAGCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids [goid 6654] [evidence ISO]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [evidence IEA]		
Mus musculus	Riken	ILMN_203895	ILMN_203895	APC7-PENDING	ri|C630034H22|PX00085I01|AK049968|3575					AK049968	Apc7-pending		ILMN_1220635	004050451	S	3179	CGCTGGGCTTTGTGGGGTTGCTACTAATGAGGATGCTTTGGTCCTGGCTC										
Mus musculus	RefSeq	ILMN_252208	ILMN_252208	HBS1L	NM_001042593.1	NM_001042593.1		56422	110611223	NM_001042593.1	Hbs1l	NP_001036058.1	ILMN_3139405	000050279	A	2048	CAAGGGCCAGAACGCCTTGGTAGAGCTGCAGACACAAAGACCAGTGGCTC	10	+	21087457-21087506	10qA3	Mus musculus Hbs1-like (S. cerevisiae) (Hbs1l), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]	2810035F15Rik; AI326327; eRFS	2810035F15Rik; AI326327; eRFS
Mus musculus	RefSeq	ILMN_213308	ILMN_213308	BC060632	NM_198625.1	NM_198625.1		244654	38348491	NM_198625.1	BC060632	NP_941027.1	ILMN_2635848	001570561	S	3852	AGTTACCACAGGGCTCCCCGAGGCTGCTTAGCGAGTTATCTCCAGGGTCT	8	+	113264443-113264492	8qE1	Mus musculus cDNA sequence BC060632 (BC060632), mRNA.		The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	MGC79213	MGC79213
Mus musculus	RefSeq	ILMN_224563	ILMN_224563	MAPK1IP1	NM_001045483.1	NM_001045483.1		69546	113865963	NM_001045483.1	Mapk1ip1	NP_001038948.1	ILMN_3064669	007570092	I	349	ACTTGTTCAGGCCGGTTCTCCATTGCCTGTCTCATCGGACTCATCACCAC	7	-	146028626-146028675	7qF4	Mus musculus mitogen-activated protein kinase 1 interacting protein 1 (Mapk1ip1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	AU043776; 2310009E07Rik; MISS	AU043776; 2310009E07Rik; MISS
Mus musculus	RefSeq	ILMN_224563	ILMN_224563	MAPK1IP1	NM_001045483.1	NM_001045483.1		69546	113865963	NM_001045483.1	Mapk1ip1	NP_001038948.1	ILMN_3142573	000160739	A	1166	CCCCTTCCGATTCGTCCAACCCGGAGAGCACCTTGGAGAGCACTGGACAA	7	-	146027809-146027858	7qF4	Mus musculus mitogen-activated protein kinase 1 interacting protein 1 (Mapk1ip1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	AU043776; 2310009E07Rik; MISS	AU043776; 2310009E07Rik; MISS
Mus musculus	RefSeq	ILMN_186671	ILMN_239865	TXNIP	NM_023719.1	NM_023719.1		56338	13994377	NM_023719.1	Txnip	NP_076208.1	ILMN_1213609	000070341	S	2549	GCTGCTTTCACTGTGGCCTCAGCCCTGGCTCGGAAGCTCACTAAGCCTTA	3	+	96364169-96364218	3qF2.1	Mus musculus thioredoxin interacting protein (Txnip), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hyplip1; VDUP1; THIF; 1200008J08Rik; AA682105	Hyplip1; VDUP1; THIF; 1200008J08Rik; AA682105
Mus musculus	RefSeq	ILMN_216730	ILMN_216730	MMD	NM_026178.2	NM_026178.2		67468	31982654	NM_026178.2	Mmd	NP_080454.1	ILMN_2674575	005670082	S	2467	CACCAGCCACACCGCTGTATATGCATGATTCTGAACAGTTAGCCGCCTGT	11	+	90139693-90139742	11qC	Mus musculus monocyte to macrophage differentiation-associated (Mmd), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1200017E07Rik; AA690185; 1810073C06Rik	1200017E07Rik; AA690185; 1810073C06Rik
Mus musculus	RefSeq	ILMN_192833	ILMN_322151	TRIO	NM_001081302.1	NM_001081302.1		223435	145587081	NM_001081302.1	Trio	NP_001074771.1	ILMN_2491741	005670369	S	9062	CTGGAAGCCGTCCGATACCTTCACAACTGCAGGATAGCACACCTGGACCT				15qB1	Mus musculus triple functional domain (PTPRF interacting) (Trio), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Solo; 6720464I07Rik; AA408740	Solo; 6720464I07Rik; AA408740
Mus musculus	RefSeq	ILMN_210820	ILMN_210820	CACNG1	NM_007582.2	NM_007582.2		12299	70778905	NM_007582.2	Cacng1	NP_031608.1	ILMN_2609549	003780347	S	570	CGGTGAAGCGTATGATTGACAGCGAGGACACGGTCTGGATAGAGCACTAC	11	-	107565115-107565164	11qE1	Mus musculus calcium channel, voltage-dependent, gamma subunit 1 (Cacng1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]	MGC117703	MGC117703
Mus musculus	RefSeq	ILMN_257790	ILMN_257790	LOC631784	NM_001039240.1	NM_001039240.1		631784	85986648	NM_001039240.1	LOC631784	NP_001034329.1	ILMN_2931659	000670369	S	1004	GCCTTTGTTACCCATGCCTACCACAGCCAAAGTTTGCCGACATTATAAGG				XqA6	Mus musculus hypothetical protein LOC631784 (LOC631784), mRNA.					
Mus musculus	RefSeq	ILMN_214686	ILMN_214686	MTIF2	NM_133767.2	NM_133767.2		76784	110625865	NM_133767.2	Mtif2	NP_598528.2	ILMN_2650774	006940017	S	2541	AAGTTCCAACTAAGACTTCCTGGGATCCAGGATTTTAAAAGCACATTAAA	11	+	29445048-29445085:29445086-29445097	11qA3.3	Mus musculus mitochondrial translational initiation factor 2 (Mtif2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	2410112O06Rik; 2310038D14Rik; IF-2mt	2410112O06Rik; 2310038D14Rik; IF-2mt
Mus musculus	RefSeq	ILMN_202536	ILMN_214686	MTIF2	NM_133767.2	NM_133767.2		76784	110625865	NM_133767.2	Mtif2	NP_598528.2	ILMN_1236180	007550435	S	226	CGCTTTTGCAGCATTCGCACGCCCTCTCCGCTATGGGAATTGTCAGCCTG	11	+	29426682-29426731	11qA3.3	Mus musculus mitochondrial translational initiation factor 2 (Mtif2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	2410112O06Rik; 2310038D14Rik; IF-2mt	2410112O06Rik; 2310038D14Rik; IF-2mt
Mus musculus	RefSeq	ILMN_214510	ILMN_214510	ABCB4	NM_008830.1	NM_008830.1		18670	6679296	NM_008830.1	Abcb4	NP_032856.1	ILMN_2648742	007210136	S	3988	AATGGTCAACATCCAGGCCGGCACACAGAACTTATGAACTCTTGTTACAG	5	+	8959135-8959175:8959176-8959184	5qA1	Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 4 (Abcb4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates [goid 46581] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out) [goid 8559] [evidence IEA]	mdr-2; Mdr2; Pgy2; Pgy-2	mdr-2; Mdr2; Pgy2; Pgy-2
Mus musculus	RefSeq	ILMN_201195	ILMN_201195	LOC382065	XM_356145.1	XM_356145.1			38089747	XM_356145.1	LOC382065		ILMN_1243608	000630075	S	967	GCTTCACCTTTCCATTTCCTGGTGACTTTTAGTGGCCTGATCCTGGGTCC										
Mus musculus	Riken	ILMN_207147	ILMN_207147	F730023C13RIK	ri|F730023C13|PL00003G06|AK089400|2607					AK089400	F730023C13Rik		ILMN_2585393	004210520	S	2415	CTGCCCCACTGTGGAGGAGTCAATGACAATGGGGACACAGGTGTTGCCCA										
Mus musculus	RefSeq	ILMN_219651	ILMN_219651	SLC39A14	NM_144808.4	NM_144808.4		213053	110347500	NM_144808.4	Slc39a14	NP_659057.2	ILMN_1214514	005550053	S	1505	CTGGCAGCCACTTCTCTGCAAACTGGATTTTTGCACTGGCTGGAGGAATG	14	-	70708483-70708532	14qD2	Mus musculus solute carrier family 39 (zinc transporter), member 14 (Slc39a14), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IDA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of ferrous iron (Fe(II) or Fe2+) ions from one side of a membrane to the other [goid 15093] [evidence IDA]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	BC021530; Zip14; MGC38539; G630015O18Rik; fad123	BC021530; Zip14; MGC38539; G630015O18Rik; fad123
Mus musculus	RefSeq	ILMN_219651	ILMN_219651	SLC39A14	NM_144808.4	NM_144808.4		213053	110347500	NM_144808.4	Slc39a14	NP_659057.2	ILMN_2711839	002900220	S	1793	CCCGAGGACTCAGCATCCACGAAGCATCATGGAAAAGGCAGCTCTTTAAA	14	-	70706358-70706407	14qD2	Mus musculus solute carrier family 39 (zinc transporter), member 14 (Slc39a14), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IDA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of ferrous iron (Fe(II) or Fe2+) ions from one side of a membrane to the other [goid 15093] [evidence IDA]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	BC021530; Zip14; MGC38539; G630015O18Rik; fad123	BC021530; Zip14; MGC38539; G630015O18Rik; fad123
Mus musculus	MEEBO	ILMN_189060	ILMN_189060	A930027H06RIK	scl995.1.1_76						A930027H06Rik		ILMN_2458010	006960411	S	7	GATCAGCACTGCAGTAGTGCCAGACCCCAAAGTAAAAGTATTATGCTCTT										
Mus musculus	RefSeq	ILMN_223568	ILMN_234204	LOC676724	XM_992449.1	XM_992449.1		676724	94374561	XM_992449.1	LOC676724	XP_997543.1	ILMN_1251853	005130609	S	254	GCATGGCATGAAGACCTGGTGACGGCTTCTCCTCCTGTCTGCAGCTGAAT					PREDICTED: Mus musculus hypothetical LOC676724 (LOC676724), mRNA.					
Mus musculus	RefSeq	ILMN_188052	ILMN_232243	GLI3	NM_008130.2	NM_008130.2		14634	120953172	NM_008130.2	Gli3	NP_032156.2	ILMN_2449396	002710544	S	8223	ACGTAGAGTTGGGATGTGATGGCCTCGGGCCTTCCTTGGAAAAGCCTGTG	13	+	15821655-15821704	13qA1	Mus musculus GLI-Kruppel family member GLI3 (Gli3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]; The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the ventral spinal cord that contributes to the commitment of the precursor cell to an interneuron fate [goid 21775] [evidence IGI]; The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the spinal cord that contributes to the process of a precursor cell becoming capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway [goid 21776] [evidence IGI]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process by which the anatomical structures of the gut are generated and organized during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48558] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process whose specific outcome is the progression of a tube over time, from its initial formation to a mature structure. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues including lung and trachea, kidney, the mammary gland, the vascular system and the gastrointestinal and urinary-genital tracts [goid 35295] [evidence IGI]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IGI]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain [goid 21798] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which the anatomical structures of the hindgut are generated and organized. Morphogenesis pertains to the creation of form [goid 7442] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus [goid 42307] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IGI]	AU023367; add; Bph; Xt; AI854843; Pdn	AU023367; add; Bph; Xt; AI854843; Pdn
Mus musculus	RefSeq	ILMN_188052	ILMN_232243	GLI3	NM_008130.2	NM_008130.2		14634	120953172	NM_008130.2	Gli3	NP_032156.2	ILMN_1215183	006040707	S	4781	CATGGGCTTCAGTCAGCAAGACAGGAAAGCTGGCTCGTTCTCCCTCTCAG	13	+	15818213-15818262	13qA1	Mus musculus GLI-Kruppel family member GLI3 (Gli3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]; The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the ventral spinal cord that contributes to the commitment of the precursor cell to an interneuron fate [goid 21775] [evidence IGI]; The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the spinal cord that contributes to the process of a precursor cell becoming capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway [goid 21776] [evidence IGI]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process by which the anatomical structures of the gut are generated and organized during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48558] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process whose specific outcome is the progression of a tube over time, from its initial formation to a mature structure. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues including lung and trachea, kidney, the mammary gland, the vascular system and the gastrointestinal and urinary-genital tracts [goid 35295] [evidence IGI]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IGI]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain [goid 21798] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which the anatomical structures of the hindgut are generated and organized. Morphogenesis pertains to the creation of form [goid 7442] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus [goid 42307] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IGI]	AU023367; add; Bph; Xt; AI854843; Pdn	AU023367; add; Bph; Xt; AI854843; Pdn
Mus musculus	RefSeq	ILMN_223286	ILMN_223286	AXIN2	NM_015732.3	NM_015732.3		12006	40254369	NM_015732.3	Axin2	NP_056547.3	ILMN_2896314	001440630	S	3915	GTGTAGGGCAGAGCGTTGACCCACTGGCTAGTGCTTGACTTGGGAATCAG	11	+	108811769-108811818	11qE1	Mus musculus axin2 (Axin2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IDA]; The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed [goid 1957] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Axil; Conductin; Axi1	Axil; Conductin; Axi1
Mus musculus	RefSeq	ILMN_189727	ILMN_245448	4930563F08RIK	XM_925052.2	XM_925052.2		75369	94375429	XM_925052.2	4930563F08Rik	XP_930145.1	ILMN_1244372	003780687	S	295	GGTTTTGAATCACCAATCATACGCTGGCAAGTGAGCCAGAAAACAGCATC				5qG2	PREDICTED: Mus musculus RIKEN cDNA 4930563F08 gene (4930563F08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_239756	ILMN_239756	KLRB1B	NM_008526.1	NM_008526.1		80782	6678743	NM_008526.1	Klrb1b	NP_032552.1	ILMN_2962004	007380390	S	1082	GAATTTGCTCTCAAATGACACCAGAAGCCCAGGGTTAGGGGATTTGGGGG	6	-	128780381-128780430	6qF3	Mus musculus killer cell lectin-like receptor subfamily B member 1B (Klrb1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity [goid 45953] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	Ly55b; Nkrp1-b; NKR-P1 34; NKR-P1B	Ly55b; Nkrp1-b; NKR-P1 34; NKR-P1B
Mus musculus	RefSeq	ILMN_216289	ILMN_216289	MGST1	NM_019946.3	NM_019946.3		56615	32129281	NM_019946.3	Mgst1	NP_064330.2	ILMN_2940195	007610114	S	450	CCACACCATTGCTTACTTGACTCCCCTTCCTCAGCCAAACAGGGGCTTGG	6	+	138120455-138120504	6qG1	Mus musculus microsomal glutathione S-transferase 1 (Mgst1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IDA]	Gst; 1500002K10Rik	Gst; 1500002K10Rik
Mus musculus	RefSeq	ILMN_222270	ILMN_312321	LOC100043526	XM_001480156.1	XM_001480156.1		100043526	149250025	XM_001480156.1	LOC100043526	XP_001480206.1	ILMN_2775450	006510341	S	212	CATATTTTGTCCAGTATGACAATGAAATTTTTAGGCAGGTATAGTTAAAC	2	+	113671863-113671912	2qE4	PREDICTED: Mus musculus similar to DNA directed RNA polymerase II polypeptide A (LOC100043526), mRNA.					
Mus musculus	RefSeq	ILMN_216261	ILMN_225730	1700054N08RIK	NM_028536.1	NM_028536.1		73420	110625951	NM_028536.1	1700054N08Rik	NP_082812.1	ILMN_1219407	007200048	S	2166	TGGGAGAATTTCGGGCAGGTGCTGGCCTGATGGTAATGTTCGTTCTTCCT	8	-	126365201-126365250	8qE2	Mus musculus RIKEN cDNA 1700054N08 gene (1700054N08Rik), mRNA. XM_925206				AI853424	AI853424
Mus musculus	RefSeq	ILMN_210658	ILMN_210658	OLFR745	NM_146299.1	NM_146299.1		258296	22129690	NM_146299.1	Olfr745	NP_666411.1	ILMN_2607889	004860669	S	864	GATTGTTACTCTGATTTACTCAGCCTTGACCCCCCTCTTAAATCCTCTCA	14	+	51262821-51262870	14qC1	Mus musculus olfactory receptor 745 (Olfr745), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR106-11	MOR106-11
Mus musculus	RefSeq	ILMN_237531	ILMN_321814	LOC100044089	XM_001472067.1	XM_001472067.1		100044089	149251667	XM_001472067.1	LOC100044089	XP_001472117.1	ILMN_3163495	003870110	A	948	CAAAAACTCAGAGCCAAGGGGATCCGGAATCCAGACCATTCCCGGGCACT	3	+	96506301-96506350		PREDICTED: Mus musculus similar to potassium channel regulatory protein KChAP (LOC100044089), mRNA.					
Mus musculus	RefSeq	ILMN_187169	ILMN_255739	ABCC9	NM_021041.2	NM_021041.2		20928	113722106	NM_021041.2	Abcc9	NP_066378.1	ILMN_1233056	003060373	S	4938	GATGAAGAGAGGAAATATTTTGGAATACGACACCCCGGAAAGCCTCTTGG	6	-	142538932-142538981	6qG2	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	AI414027; AI449286; SUR2B; Sur2; SUR2A	AI414027; AI449286; SUR2B; Sur2; SUR2A
Mus musculus	RefSeq	ILMN_187169	ILMN_255739	ABCC9	NM_021041.2	NM_021041.2		20928	113722106	NM_021041.2	Abcc9	NP_066378.1	ILMN_2623859	004150376	S	6158	CATGCATTCGACCATTTGTCCTGTTCTAATTATGAAGAGCGTACCAGAAG	6	-	142537712-142537761	6qG2	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	AI414027; AI449286; SUR2B; Sur2; SUR2A	AI414027; AI449286; SUR2B; Sur2; SUR2A
Mus musculus	RefSeq	ILMN_212024	ILMN_255739	ABCC9	NM_021041.2	NM_021041.2		20928	113722106	NM_021041.2	Abcc9	NP_066378.1	ILMN_1253491	006510730	S	2177	GAGCAAGCACGGCGCCTCCGGCCCGCTGAGACGGAAGACATTGCCATAAA	6	-	142607018-142607067	6qG2	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	AI414027; AI449286; SUR2B; Sur2; SUR2A	AI414027; AI449286; SUR2B; Sur2; SUR2A
Mus musculus	RefSeq	ILMN_190033	ILMN_232153	WDR7	XM_915908.2	XM_915908.2		104082	94404934	XM_915908.2	Wdr7	XP_921001.1	ILMN_2466601	000830091	S	6790	CTCAGCTTGGATCCCTCAACACTGAGGTGAACCTTGCATTGTCATCCCAG				18qE1	PREDICTED: Mus musculus WD repeat domain 7, transcript variant 5 (Wdr7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_190033	ILMN_232153	WDR7	XM_915908.2	XM_915908.2		104082	94404934	XM_915908.2	Wdr7	XP_921001.1	ILMN_1221192	003460010	S	3114	CTGACGCTGATCACTCTGGCTCTGACTCTGCCTCTCCTGCTTTACCTACC				18qE1	PREDICTED: Mus musculus WD repeat domain 7, transcript variant 5 (Wdr7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_192797	ILMN_192797	KIF3B	scl20094.10_51				31560674	NM_008444	Kif3b		ILMN_2491419	005900411	S	3	CAGAGGGATCTAGGTAAGAACGGAATGCCCCACATTTACCATGCAAGTCT						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]		
Mus musculus	MEEBO	ILMN_218495	ILMN_218495	APLP1	scl31526.16.1_20	NM_007467.1			6680699	NM_007467.1	Aplp1		ILMN_2696532	002030435	S	2001	CATGGCTATGAGAACCCCACCTACCGCTTCCTGGAAGAACGACCTTGACC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197731	ILMN_248698	SYNPO2	XM_915986.2	XM_915986.2		118449	94370328	XM_915986.2	Synpo2	XP_921079.1	ILMN_1259318	004760091	S	137	GAAGATGGGCACCGGAGATTTCATCTGCATTTCCATGACTGGAGGGGCGC				3qG1	PREDICTED: Mus musculus synaptopodin 2, transcript variant 3 (Synpo2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISA]		
Mus musculus	RefSeq	ILMN_191364	ILMN_248698	SYNPO2	XM_915986.2	XM_915986.2		118449	94370328	XM_915986.2	Synpo2	XP_921079.1	ILMN_2678838	004900278	S	3033	CTCAACGCGTCTTTGTTTACCTTTCAACCCCCTGATTCAAAGGATGGCCT				3qG1	PREDICTED: Mus musculus synaptopodin 2, transcript variant 3 (Synpo2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISA]		
Mus musculus	RefSeq	ILMN_220346	ILMN_220346	6430537H07RIK	NM_178689.3	NM_178689.3		226265	141802690	NM_178689.3	6430537H07Rik	NP_848804.1	ILMN_2720911	000990576	S	1958	GTGCCTCCACGGTGTGGCTCCGCTCTGAACTCCACTTATATCCGTAAATG	19	+	59045300-59045349	19qD3	Mus musculus RIKEN cDNA 6430537H07 gene (6430537H07Rik), mRNA.	A multimeric enzyme complex, usually a dimer or an octamer, that catalyzes the conversion of 2-phospho-D-glycerate to phosphoenolpyruvate and water [goid 15] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Catalysis of the reaction: 2-phospho-D-glycerate = phosphoenolpyruvate + H2O [goid 4634] [evidence IEA]	MGC30738	MGC30738
Mus musculus	RefSeq	ILMN_217312	ILMN_217312	RBP4	NM_011255.2	NM_011255.2		19662	62990164	NM_011255.2	Rbp4	NP_035385.1	ILMN_1252185	005420240	S	918	GCAACGTCTAGGATGTGAAGTTTGAAGATTTCTGATTAGCTTTCATCCGG	19	-	38191312-38191361	19qC3	Mus musculus retinol binding protein 4, plasma (Rbp4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell proliferation [goid 60044] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]; The process whose specific outcome is the progression of the urinary bladder over time, from its formation to the mature structure. The urinary bladder is an elastic, muscular sac situated in the anterior part of the pelvic cavity in which urine collects before excretion [goid 60157] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The process by which the anatomical structures of female genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 48807] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; The reproductive developmental process whose specific outcome is the progression of the uterus over time, from its formation to the mature structure [goid 60065] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51024] [evidence IDA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IMP]; Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48562] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized in a camera-type eye during the embryonic life stage . Morphogenesis pertains to the creation of form [goid 60059] [evidence IMP]; The reproductive developmental process whose specific outcome is the progression of the vagina over time, from its formation to the mature structure [goid 60068] [evidence IMP]	Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 5501] [evidence IEA]	Rbp-4	Rbp-4
Mus musculus	RefSeq	ILMN_217933	ILMN_311159	LOC100039655	XM_001473285.1	XM_001473285.1		100039655	149263822	XM_001473285.1	LOC100039655	XP_001473335.1	ILMN_2689488	005270241	S	552	AGGGAAGTGAGACGCTGCTGCTACATGAGCCAGAAGGACGTGCAGGAGCT	13	-	8941089-8941138	13qA1	PREDICTED: Mus musculus similar to isopentenyl diphosphate delta-isomerase type 2 (LOC100039655), mRNA.					
Mus musculus	RefSeq	ILMN_215754	ILMN_215754	SLAMF9	NM_029612.3	NM_029612.3		98365	142361393	NM_029612.3	Slamf9	NP_083888.2	ILMN_2663249	007510291	S	977	CCCGTCTGATTGGCTTTTGAGGTCCTCTTCTGAGCTTTGTTTCAGGCTCT	1	+	174408380-174408390:174408391-174408429	1qH3	Mus musculus SLAM family member 9 (Slamf9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			CD84-H1; 2310026I04Rik; AI462096; Cd2f10; SF2001; CD2F-10	CD84-H1; 2310026I04Rik; AI462096; Cd2f10; SF2001; CD2F-10
Mus musculus	Riken	ILMN_203604	ILMN_203604	A930002F06RIK	ri|A930002F06|PX00065L01|AK044226|3749					AK044226	A930002F06Rik		ILMN_1226461	000670136	S	3586	AGCCCACGGGGTGTTGGTCCTTCTACAGTGTGTCTTCCAGGGCTCACCTT										
Mus musculus	MEEBO	ILMN_186169	ILMN_186169	KLF7	scl16685.5_486				31981435	NM_033563	Klf7		ILMN_2433213	004640338	S	20	TCTCTTCCCAGTCTGTAGCAGTCAGTGTCCAGCATGAATGCACGCACACG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_198022	ILMN_198022	LOC231501	XM_144435.2	XM_144435.2			38080421	XM_144435.2	LOC231501		ILMN_1232036	001980170	S	246	CATTGAACCCAAGATGCCAAAGGGCCCCAGCCTCAAATTCAGCCGTCTGG										
Mus musculus	RefSeq	ILMN_219969	ILMN_219969	CSTL1	NM_177655.3	NM_177655.3		228756	133891780	NM_177655.3	Cstl1	NP_808323.1	ILMN_2715857	003060110	S	521	ACTCTGTACCCTGGATGAACTACTACCAGCTCTGGAACAATTCCTGCCAG	2	+	148581025-148581074	2qG3	Mus musculus cystatin-like 1 (Cstl1), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RCET2; MGC58781; RCET1; RCET3	RCET2; MGC58781; RCET1; RCET3
Mus musculus	RefSeq	ILMN_216227	ILMN_216227	IL13RA1	NM_133990.4	NM_133990.4		16164	118129910	NM_133990.4	Il13ra1	NP_598751.3	ILMN_2668696	007510544	S	3008	CTCCTGGCCCTTTTGGGTATCAGCTTGCAGCTGGGATACAGGCATCTTAG	X	+	33710579-33710628	XqA3.3	Mus musculus interleukin 13 receptor, alpha 1 (Il13ra1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]	AI882074; IL-13r[a]; CD213a1; Il13ra; NR4	AI882074; IL-13r[a]; CD213a1; Il13ra; NR4
Mus musculus	RefSeq	ILMN_184647	ILMN_184647	ZRSR2	NM_178794.3	NM_178794.3		22184	121949774	NM_178794.3	Zrsr2	NP_848909.2	ILMN_2420366	006840672	S	1117	GCAGCTGCCCTGTTTTACACTCTGTACCACTCTGTGGCAAGTGTTAGTTT	X	-	160391018-160391067	XqF5	Mus musculus zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 (Zrsr2), transcript variant 2, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	C77286; U2af1-rs2; A230052C13Rik; 35kDa; 5031411E02Rik	C77286; U2af1-rs2; A230052C13Rik; 35kDa; 5031411E02Rik
Mus musculus	RefSeq	ILMN_220976	ILMN_220976	GLRA2	NM_183427.4	NM_183427.4		237213	153791587	NM_183427.4	Glra2	NP_906272.1	ILMN_2729364	000020487	S	2324	TTGCTGTCGCTAAGCCACAGTATTTATGGAGATGGTGTGTTGTGACCGGT				XqF5	Mus musculus glycine receptor, alpha 2 subunit (Glra2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201130	ILMN_201130	LOC384838	XM_357893.1	XM_357893.1			38089315	XM_357893.1	LOC384838		ILMN_1227443	001980414	S	199	GGGGTGAGCCTGAGTGCACCCTACGACAGCAGTTCTCATACTGTCATGGC										
Mus musculus	MEEBO	ILMN_185396	ILMN_185396	ZFH4	scl0080892.2_161	NM_030708.1			13507649	NM_030708.1	Zfh4		ILMN_2520592	006180047	S	14	CGCCTCTCACAAAACAAAGGACCGTTTTACAAAGGATGATCCGACAGTGT										
Mus musculus	RefSeq	ILMN_223626	ILMN_328624	4930579G22RIK	XR_035134.1	XR_035134.1		69034	149254608	XR_035134.1	4930579G22Rik		ILMN_1214985	007160544	S	492	TAAGTTTACTGCTCTAGTGTTTTTCCTCACTAATTAATTGTTAAGTAAGT	5	+	130387040-130387089	5qG1.3	PREDICTED: Mus musculus RIKEN cDNA 4930579G22 gene (4930579G22Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_255761	ILMN_255761	OLFR205	NM_001011736.1	NM_001011736.1		257881	58801265	NM_001011736.1	Olfr205	NP_001011736.1	ILMN_2854009	001940047	S	758	CCCTCCTCTTCATGTATGTGAGTCATGGGTCTGCACCAGGTGAAAACCAG	16	-	59328526-59328575	16qC1.3	Mus musculus olfactory receptor 205 (Olfr205), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR182-11P	MOR182-11P
Mus musculus	RefSeq	ILMN_202959	ILMN_185497	ZFP259	NM_011752.2	NM_011752.2		22687	133778942	NM_011752.2	Zfp259	NP_035882.1	ILMN_1233679	007570474	S	2531	CCACTTGAGAGGCTGAGGAGGAAGGCTAACAAATTCAGGGGCAGCTTAGG	9	+	46090273-46090322	9qA5.2	Mus musculus zinc finger protein 259 (Zfp259), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]	AI303781; ZPR1	AI303781; ZPR1
Mus musculus	RefSeq	ILMN_185497	ILMN_185497	ZFP259	NM_011752.2	NM_011752.2		22687	133778942	NM_011752.2	Zfp259	NP_035882.1	ILMN_1241970	003290091	S	1890	GGGCCGAGCAGGCACAGGTGAAGACGCCACATTAAAGTGATGGCCTTTAA	9	+	46089632-46089681	9qA5.2	Mus musculus zinc finger protein 259 (Zfp259), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]	AI303781; ZPR1	AI303781; ZPR1
Mus musculus	RefSeq	ILMN_196736	ILMN_310163	EG667728	XR_035278.1	XR_035278.1		667728	149264137	XR_035278.1	EG667728		ILMN_2525605	000110358	S	289	CGCCACCTGCAGCTGGCCATCCGCAACGACGAGGAGCTCAACAAGCTGCT				13qA5	PREDICTED: Mus musculus predicted gene, EG667728 (EG667728), misc RNA.					
Mus musculus	RefSeq	ILMN_256260	ILMN_256260	4930430D24RIK	NM_001034856.2	NM_001034856.2		194735	141803081	NM_001034856.2	4930430D24Rik	NP_001030028.1	ILMN_3161824	006770463	S	472	CAAACCAACCTCCTAAGTGACTCTTCTGCCATCCAAGTCTCTGGCTCAGC	X	-	35392875-35392924	XqA3.3	Mus musculus RIKEN cDNA 4930430D24 gene (4930430D24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_224129	ILMN_254111	2410002I01RIK	NM_183137.2	NM_183137.2		78777	118130816	NM_183137.2	2410002I01Rik	NP_898960.2	ILMN_2775300	007160670	S	2141	CAAGACCCACACAGACCTTCTTAGCGGTCTGTCCATAGCTGGAGACCACC	11	-	119952424-119952473	11qE2	Mus musculus RIKEN cDNA 2410002I01 gene (2410002I01Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-37J21.2	RP23-37J21.2
Mus musculus	RefSeq	ILMN_199174	ILMN_241905	AI595406	NM_001004147.3	NM_001004147.3		237730	148539881	NM_001004147.3	AI595406	NP_001004147.1	ILMN_1259595	001090692	S	1068	GGTGCTGGAAGATGCCCGGCACCCGCTCAAGTATCGCATGCTCATTGGCA				11qA4	Mus musculus expressed sequence AI595406 (AI595406), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]	MGC62475	MGC62475
Mus musculus	RefSeq	ILMN_201320	ILMN_201320	LOC386442	XM_359257.1	XM_359257.1			38090818	XM_359257.1	LOC386442		ILMN_2541878	000940600	S	608	AAAGGAGAAGGCCTGCCTGGTGGATGAGGACTCCCACTCTTCAGCTGGGA										
Mus musculus	RefSeq	ILMN_201132	ILMN_332368	LOC100042405	XM_001478555.1	XM_001478555.1		100042405	149258914	XM_001478555.1	LOC100042405	XP_001478605.1	ILMN_1238360	002710753	S	623	GCCTGATACTTTTGGAAGGCTCCTGTTGGCTCCCAGGAGAGAGATCCTGG	8	-	74828540-74828589	8qB3.3	PREDICTED: Mus musculus similar to high mobility group nucleosomal binding domain 2 (LOC100042405), mRNA.					
Mus musculus	RefSeq	ILMN_214792	ILMN_214792	4930579C12RIK	NM_175672.3	NM_175672.3		319213	141802728	NM_175672.3	4930579C12Rik	NP_783603.1	ILMN_1235152	003190020	S	3301	GATAACATAGAAGACACAGATACTGAAAATGCACAAAAAGCTGTGGATAG	9	-	89021513-89021562	9qE3.1	Mus musculus RIKEN cDNA 4930579C12 gene (4930579C12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212931	ILMN_212931	ARFRP1	NM_029702.3	NM_029702.3		76688	141803072	NM_029702.3	Arfrp1	NP_083978.2	ILMN_1226330	000450598	S	1814	ACCTTCTGAGTAGGGTTCTCTTCAGGGAGGTTTGGAGTTGTGGCTAAGCC	2	-	181093078-181093127	2qH4	Mus musculus ADP-ribosylation factor related protein 1 (Arfrp1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISO]	MGC6837; 1500006I01Rik; AI480700	MGC6837; 1500006I01Rik; AI480700
Mus musculus	RefSeq	ILMN_212931	ILMN_212931	ARFRP1	NM_029702.3	NM_029702.3		76688	141803072	NM_029702.3	Arfrp1	NP_083978.2	ILMN_2631745	000160064	S	508	GGTGGTTTCGAGTGAAGCACTGGACGGTGTTCCCATCCTGGTGTTGGCCA	2	-	181095722-181095771	2qH4	Mus musculus ADP-ribosylation factor related protein 1 (Arfrp1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISO]	MGC6837; 1500006I01Rik; AI480700	MGC6837; 1500006I01Rik; AI480700
Mus musculus	RefSeq	ILMN_213792	ILMN_213792	A430083B19RIK	NM_177624.2	NM_177624.2		218739	31341410	NM_177624.2	A430083B19Rik	NP_808292.1	ILMN_2952609	003170136	S	1071	GCTCATGCTTGCATTAGTGAGTAATTTAAAATATGACCCATCTCCCTAGC	14	+	12476246-12476295	14qA1	Mus musculus RIKEN cDNA A430083B19 gene (A430083B19Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198612	ILMN_198612	LOC211702	XM_141872.2	XM_141872.2			38086452	XM_141872.2	LOC211702		ILMN_2532304	004860474	S	828	CATGACAAGGGACACTCCTGACAATCAGGCTGTAGTCGTGATGGCCTTCG										
Mus musculus	RefSeq	ILMN_184799	ILMN_260674	BAT3	NM_057171.1	NM_057171.1		224727	33147081	NM_057171.1	Bat3	NP_476512.1	ILMN_2736975	005910102	S	3627	CCAAAAACGACTGCAGGAAGATCCCAACTACAGCCCCCAGCGCTTCCCTA	17	+	35280281-35280330	17qB1	Mus musculus HLA-B-associated transcript 3 (Bat3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	G3; AA408914; 2410045D21Rik; Scythe; BAG6; D17H6S52E	G3; AA408914; 2410045D21Rik; Scythe; BAG6; D17H6S52E
Mus musculus	RefSeq	ILMN_193405	ILMN_231653	CEBPA	NM_007678.3	NM_007678.3		12606	131886531	NM_007678.3	Cebpa	NP_031704.2	ILMN_1247147	007380400	S	1105	AAGCGGGTGGAACAGCTGAGCCGTGAACTGGACACGCTGCGGGGCATCTT	7	+	35905416-35905465	7qB1	Mus musculus CCAAT/enhancer binding protein (C/EBP), alpha (Cebpa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IGI]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence NAS]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Cebp; CBF-A	Cebp; CBF-A
Mus musculus	MEEBO	ILMN_188643	ILMN_188643	SCL0002177.1_17	scl0002177.1_17						scl0002177.1_17		ILMN_1242963	006620167	S	17	GGCTGGAACTCACAGAGATCTGCCAACCTGTGCGCCTGGGTACTGGGATT										
Mus musculus	Riken	ILMN_202622	ILMN_202622	NFE2L3	ri|9530007C14|PX00111K02|AK020550|896					AK020550	Nfe2l3		ILMN_1250434	004200671	S	657	CGGGAGCCAGTTCCAGGCGAATCTAACACCTTCTTGTTGCCTCCGAGAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198915	ILMN_198915	LOC234915	XM_134630.2	XM_134630.2			38089713	XM_134630.2	LOC234915		ILMN_2533380	006980142	S	3980	GAGCTCCTGAGGCAGCAGGTGAACCGTGCAATATAACGGAGTCGCCAGGA										
Mus musculus	MEEBO	ILMN_195397	ILMN_195397	ASCL2	scl30465.3.1_58				6678807	NM_008554	Ascl2		ILMN_2750349	005690541	S	567	GGGCTGTTAACACCCGCTACTCCGCCGTCCGATGAGTGCACGCAGCCCTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210016	ILMN_210016	NLRP4F	NM_175290.4	NM_175290.4		97895	140972010	NM_175290.4	Nlrp4f	NP_780499.3	ILMN_2601376	007560296	S	3305	TAATGCTTTAGGATCTCTTAACAAGAGTTTTGCCTTTTGTTGGATTATTT	13	-	65278591-65278640	13qB3	Mus musculus NLR family, pyrin domain containing 4F (Nlrp4f), mRNA.		Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C86045; Nalp4f; C330026N02Rik; Nalp-kappa	C86045; Nalp4f; C330026N02Rik; Nalp-kappa
Mus musculus	RefSeq	ILMN_211444	ILMN_211444	MRPL48	NM_198831.1	NM_198831.1		52443	38505260	NM_198831.1	Mrpl48	NP_942128.1	ILMN_1243324	006110091	S	1031	GAACATGTTCTCATCCTACCATACTGTTTTAGAGTGAATTCATTCTCTAA	7	-	107697462-107697511	7qE3	Mus musculus mitochondrial ribosomal protein L48 (Mrpl48), transcript variant 2, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	D4Ertd786e; CGI-118; 1810030E20Rik; 2610028L11Rik	D4Ertd786e; CGI-118; 1810030E20Rik; 2610028L11Rik
Mus musculus	RefSeq	ILMN_211444	ILMN_211444	MRPL48	NM_198831.1	NM_198831.1		52443	38505260	NM_198831.1	Mrpl48	NP_942128.1	ILMN_1216843	004220725	S	1055	TGTTTTAGAGTGAATTCATTCTCTAAAACAGTCTGATGTAAACTGATTGT	7	-	107697438-107697487	7qE3	Mus musculus mitochondrial ribosomal protein L48 (Mrpl48), transcript variant 2, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	D4Ertd786e; CGI-118; 1810030E20Rik; 2610028L11Rik	D4Ertd786e; CGI-118; 1810030E20Rik; 2610028L11Rik
Mus musculus	RefSeq	ILMN_194284	ILMN_256045	XPNPEP2	NM_133213.2	NM_133213.2		170745	133778993	NM_133213.2	Xpnpep2	NP_573476.2	ILMN_1248998	002070376	S	3136	AGAGCCGCCATGGCAGTGCTATTAAAGCCTCTCATATCTTTGAAAACCTC	X	+	45489796-45489845	XqA4	Mus musculus X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound (Xpnpep2), transcript variant 1, mRNA.			Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	mAPP; 9030008G12Rik	mAPP; 9030008G12Rik
Mus musculus	RefSeq	ILMN_194360	ILMN_261274	D330017J20RIK	NM_177204.3	NM_177204.3		320609	83627726	NM_177204.3	D330017J20Rik	NP_796178.2	ILMN_2760953	000630110	S	3308	ATCATTTGAAAAGAACCACAATTAATATAATATGGCCTTCTCTAGGAATA	6	+	29907619-29907668	6qA3.3	Mus musculus RIKEN cDNA D330017J20 gene (D330017J20Rik), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FAM40B; mKIAA1170	FAM40B; mKIAA1170
Mus musculus	RefSeq	ILMN_203884	ILMN_261274	D330017J20RIK	NM_177204.3	NM_177204.3		320609	83627726	NM_177204.3	D330017J20Rik	NP_796178.2	ILMN_1245026	002750735	S	2159	GTCAGCTCCAATCTTAAAGCGAGCTCTCAAAGTCAAACAGGCCATGCTAC	6	+	29905449-29905498	6qA3.3	Mus musculus RIKEN cDNA D330017J20 gene (D330017J20Rik), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FAM40B; mKIAA1170	FAM40B; mKIAA1170
Mus musculus	RefSeq	ILMN_213554	ILMN_213554	MAP3K12	NM_009582.2	NM_009582.2		26404	31543235	NM_009582.2	Map3k12	NP_033608.2	ILMN_2836006	004590687	S	4813	GGCCTTACTGGTACCAAATTCTCCTTGTAAACATACCTGGCTACAGTGCC	15	-	102325978-102326027	15qF3	Mus musculus mitogen activated protein kinase kinase kinase 12 (Map3k12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A cell projection part that is part of an axon [goid 33267] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]; The modification of histones by addition of phosphate groups [goid 16572] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	DLK; Zpk; MUK	DLK; Zpk; MUK
Mus musculus	RefSeq	ILMN_191090	ILMN_191090	ZFP319	NM_024467.3	NM_024467.3		79233	40254352	NM_024467.3	Zfp319	NP_077787.3	ILMN_1257481	007650541	S	3840	GGTCACAAAGCCTCAAAAAACTGGAACTCAGGCTTATAACAGCCTAGTCC	8	-	97850253-97850302	8qD1	Mus musculus zinc finger protein 319 (Zfp319), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI413472; AI225750; KIAA1388; mKIAA1388	AI413472; AI225750; KIAA1388; mKIAA1388
Mus musculus	RefSeq	ILMN_211622	ILMN_315694	SPATA18	XM_001478951.1	XM_001478951.1		73472	149253786	XM_001478951.1	Spata18	XP_001479001.1	ILMN_2686537	006330056	S	1615	GGCCTGCTCTCATGGAGAATGACTGTGTCATTATGAAGGGAGAAGCTGTC				5qC3.3	PREDICTED: Mus musculus spermatogenesis associated 18 (Spata18), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]				
Mus musculus	RefSeq	ILMN_211622	ILMN_315694	SPATA18	XM_001478951.1	XM_001478951.1		73472	149253786	XM_001478951.1	Spata18	XP_001479001.1	ILMN_2617758	001710100	S	644	TCTTGAAGGAGCCAAGAACGGATCAACCATATCCCTCCTGGCTGCAGAGG				5qC3.3	PREDICTED: Mus musculus spermatogenesis associated 18 (Spata18), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]				
Mus musculus	Riken	ILMN_201778	ILMN_201778	SEMCAP2-PENDING	ri|2210022J24|ZX00053N13|AK008771|894					AK008771	Semcap2-pending		ILMN_1224616	001440100	S	103	CTAGAAGGGGGTTGATCGTGCACAGCTTTCCTTCTGCCTGAGTAGGTAGC										
Mus musculus	RefSeq	ILMN_211661	ILMN_211661	FAM115C	NM_146174.1	NM_146174.1		232748	22122712	NM_146174.1	Fam115c	NP_666286.1	ILMN_2985836	001300437	S	4061	CGGCTTTCTTCAGCTTTGTGGTCCCTAAGAGGCTACCTATGCCGTACACC	6	-	42573188-42573237	6qB2.1	Mus musculus family with sequence similarity 115, member C (Fam115c), mRNA.				MGC7793	MGC7793
Mus musculus	MEEBO	ILMN_192260	ILMN_192260	AU016693	scl51413.22_393				31341063	NM_178686	AU016693		ILMN_2486454	007570440	S	11	ACAGAGGGGTTGCTGGACTTGAGGGTGACGAGACAGATGATCATAGCAGG										
Mus musculus	MEEBO	ILMN_210719	ILMN_210719	B930071L05	scl45812.3.1_60				51768270	XM_488696	B930071L05		ILMN_2608487	000150445	S	2318	CGAATGCTTCTGATGGTATTGGGATTTGCAGGGAGGAGCCAGGGATTGGC										
Mus musculus	RefSeq	ILMN_213538	ILMN_213538	PTPN7	NM_177081.3	NM_177081.3		320139	118130340	NM_177081.3	Ptpn7	NP_796055.1	ILMN_1235056	002340500	S	2950	ATAATGTGAGGCTACAACTGAGGTTAACATTTTTAATGCTCGACCTGAGC	1	+	137041583-137041632	1qE4	Mus musculus protein tyrosine phosphatase, non-receptor type 7 (Ptpn7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence TAS]	BPTP-4; LC-PTP; MGC107411; LPTP; C920001D21Rik; HEPTP	BPTP-4; LC-PTP; MGC107411; LPTP; C920001D21Rik; HEPTP
Mus musculus	RefSeq	ILMN_220654	ILMN_220654	EG13909	NM_144511.1	NM_144511.1		13909	21362300	NM_144511.1	EG13909	NP_653094.1	ILMN_2917053	001940053	S	1744	CCTAGACCTTACTGACTGGGCCAACCCAAGAATAGTGGCACCCAAGCAGG	8	+	107617185-107617234	8qD3	Mus musculus predicted gene, EG13909 (EG13909), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Es31	Es31
Mus musculus	RefSeq	ILMN_220654	ILMN_220654	EG13909	NM_144511.1	NM_144511.1		13909	21362300	NM_144511.1	EG13909	NP_653094.1	ILMN_2733745	007150324	S	791	GGGATTGTCACGACCATTATGATGGAAGACATGAAACCATGGCCTGAAGC	8	+	107610784-107610826:107612319-107612325	8qD3	Mus musculus predicted gene, EG13909 (EG13909), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Es31	Es31
Mus musculus	RefSeq	ILMN_220654	ILMN_220654	EG13909	NM_144511.1	NM_144511.1		13909	21362300	NM_144511.1	EG13909	NP_653094.1	ILMN_1254721	000620561	S	1273	CATTCCTACCTTGAACTTCTCAAAATACCTTCGAGATGCTGGGTGCCCTG	8	+	107615535-107615558:107616505-107616530	8qD3	Mus musculus predicted gene, EG13909 (EG13909), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Es31	Es31
Mus musculus	RefSeq	ILMN_209389	ILMN_209389	MC2R	NM_008560.2	NM_008560.2		17200	31560668	NM_008560.2	Mc2r	NP_032586.1	ILMN_2595350	003190672	S	1056	GCAATGCAGTTATTGACCCCTTTATATATGCCTTTCGGAGCCCAGAGCTC	18	-	68567025-68567074	18qE2	Mus musculus melanocortin 2 receptor (Mc2r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with adrenocorticotropin to initiate a change in cell activity [goid 4978] [evidence IEA]; Combining with melanocortin to initiate a change in cell activity [goid 4977] [evidence IEA]	ACTHR	ACTHR
Mus musculus	RefSeq	ILMN_212766	ILMN_212766	IL27	NM_145636.1	NM_145636.1		246779	21704109	NM_145636.1	Il27	NP_663611.1	ILMN_2630045	005090554	S	598	TATACCTACCAGCTCCTTCACTCCCTGGAGCTTGTCCTGTCTCGGGCTGT	7	-	133732866-133732915	7qF3	Mus musculus interleukin 27 (Il27), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of T cell proliferation [goid 42129] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; Interacting selectively with the interleukin-27 receptor [goid 45523] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	IL-27; p28; Il30	IL-27; p28; Il30
Mus musculus	RefSeq	ILMN_212866	ILMN_212866	TOR1A	NM_144884.1	NM_144884.1		30931	21450254	NM_144884.1	Tor1a	NP_659133.1	ILMN_2764205	006980379	S	1212	GATGAAAGCAGCTCCCAGCATTCTGGACTTGTGATTTTTTTAAAATTATG	2	-	30816244-30816293	2qB	Mus musculus torsin family 1, member A (torsin A) (Tor1a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Dyt1; torsinA; MGC18883; DQ2	Dyt1; torsinA; MGC18883; DQ2
Mus musculus	RefSeq	ILMN_212866	ILMN_212866	TOR1A	NM_144884.1	NM_144884.1		30931	21450254	NM_144884.1	Tor1a	NP_659133.1	ILMN_1258334	006290369	S	725	CAGAGGGAAGAAATCAAGCTCAGAGACATGGAGCCCGCCCTGGCCGTGTC	2	-	30819008-30819057	2qB	Mus musculus torsin family 1, member A (torsin A) (Tor1a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Dyt1; torsinA; MGC18883; DQ2	Dyt1; torsinA; MGC18883; DQ2
Mus musculus	RefSeq	ILMN_212866	ILMN_212866	TOR1A	NM_144884.1	NM_144884.1		30931	21450254	NM_144884.1	Tor1a	NP_659133.1	ILMN_2631144	001410324	S	727	AGAGGGAAGAAATCAAGCTCAGAGACATGGAGCCCGCCCTGGCCGTGTCG	2	-	30819006-30819055	2qB	Mus musculus torsin family 1, member A (torsin A) (Tor1a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Dyt1; torsinA; MGC18883; DQ2	Dyt1; torsinA; MGC18883; DQ2
Mus musculus	Riken	ILMN_206848	ILMN_206848	EGF	ri|D430013M15|PX00194B03|AK084927|1667					AK084927	Egf		ILMN_1240039	006370673	S	1343	TCTTATGAACTGGCTCAAGCACGACCAGGAAGTGTGGTGTGTAGGAGGGG						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IGI]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]; The process that activates or increases the rate or extent of granule cell precursor proliferation [goid 21940] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196583	ILMN_196583	GATS	NM_030719.3	NM_030719.3		80909	65301482	NM_030719.3	Gats	NP_109644.2	ILMN_1237690	005390477	S	3458	TACCGCAAGTGGGGCAGGCTGAGAGGGCCAGTGTAGTCTGCTTCATAGCT	5	+	134614826-134614875	5qG2	Mus musculus opposite strand transcription unit to Stag3 (Gats), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW742413; 7530428J21Rik	AW742413; 7530428J21Rik
Mus musculus	RefSeq	ILMN_196583	ILMN_196583	GATS	NM_030719.3	NM_030719.3		80909	65301482	NM_030719.3	Gats	NP_109644.2	ILMN_3110679	000110132	A	1688	AGGGACATCTTAGGGAGTTGGTGGAGCAAGATTGGGGGTACAGAGCTGGG	5	+	134613028-134613030:134612920-134612966	5qG2	Mus musculus opposite strand transcription unit to Stag3 (Gats), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW742413; 7530428J21Rik	AW742413; 7530428J21Rik
Mus musculus	RefSeq	ILMN_196583	ILMN_196583	GATS	NM_030719.3	NM_030719.3		80909	65301482	NM_030719.3	Gats	NP_109644.2	ILMN_3036708	004150242	I	4495	GAGTCTCTCGGCTCACAGGGAGGGTAGGAGATTGGGCTGTTAAGAAGGTA	5	+	134615863-134615912	5qG2	Mus musculus opposite strand transcription unit to Stag3 (Gats), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW742413; 7530428J21Rik	AW742413; 7530428J21Rik
Mus musculus	RefSeq	ILMN_200324	ILMN_200324	LOC386235	XM_359130.1	XM_359130.1			38081316	XM_359130.1	LOC386235		ILMN_1259808	004570291	S	216	AGCATTTCTAGTGCGGGAAGGTGCTACGCTTGTGCCTGGGGGAGAAAAGG										
Mus musculus	RefSeq	ILMN_217923	ILMN_314526	4930562A09RIK	XR_035372.1	XR_035372.1		75303	149254382	XR_035372.1	4930562A09Rik		ILMN_1229901	004540746	S	667	GAAGCTTAAAAGGAAACTTCTTCCCCAGAGATCAGCTCTAAGCCCAGGGG				5qF	PREDICTED: Mus musculus RIKEN cDNA 4930562A09 gene (4930562A09Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_221827	ILMN_221827	SYT7	NM_173068.1	NM_173068.1		54525	41281839	NM_173068.1	Syt7	NP_775091.1	ILMN_2740949	007550689	S	471	AGGGCTTTCGGAACAGGATGACTTTGCCAATATCCCTGACCTGCAAAACC	19	+	10504861-10504910	19qA	Mus musculus synaptotagmin VII (Syt7), transcript variant 3, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196331	ILMN_196331	9130415E20RIK	NM_175169.2	NM_175169.2			31340926	NM_175169.2	9130415E20Rik		ILMN_1251143	001030114	S	1522	TTGTAAGAGAACTCCAGTGTTGCTATGCACAAGGAACTCTCCTGGGGGCC										
Mus musculus	RefSeq	ILMN_188284	ILMN_188284	UBE2B	NM_009458.3	NM_009458.3		22210	141801975	NM_009458.3	Ube2b	NP_033484.2	ILMN_2451360	002070044	S	756	TAATGTTGGTGTGGAGTTTTCATGACAGAATATACACATTTTGTAAATCT	11	-	51799888-51799937	11qB1.3	Mus musculus ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae) (Ube2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The assembly and organization of the sperm flagellar axoneme, the bundle of microtubules and associated proteins that forms the core of the eukaryotic sperm flagellum, and is responsible for movement [goid 7288] [evidence IMP]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	E2-14k; Rad6b; HR6B; 2610301N02Rik	E2-14k; Rad6b; HR6B; 2610301N02Rik
Mus musculus	RefSeq	ILMN_212199	ILMN_212199	A030007L17RIK	NM_026637.3	NM_026637.3		68252	141803096	NM_026637.3	A030007L17Rik	NP_080913.1	ILMN_2694767	004810075	S	896	GCGCACTGCTGCGCTTGGTCTGCTTTCTGCTTGTATCCGATCGGCTTGTA	6	-	54935505-54935554	6qB3	Mus musculus RIKEN cDNA A030007L17 gene (A030007L17Rik), mRNA.				AA673177	AA673177
Mus musculus	RefSeq	ILMN_212199	ILMN_212199	A030007L17RIK	NM_026637.3	NM_026637.3		68252	141803096	NM_026637.3	A030007L17Rik	NP_080913.1	ILMN_2623886	005050100	S	237	GCTACCATTTTTCAAAGTCCTGGCGACGAAGTGTGGGGAGTGGTATGGAG	6	-	54939438-54939487	6qB3	Mus musculus RIKEN cDNA A030007L17 gene (A030007L17Rik), mRNA.				AA673177	AA673177
Mus musculus	RefSeq	ILMN_212199	ILMN_212199	A030007L17RIK	NM_026637.3	NM_026637.3		68252	141803096	NM_026637.3	A030007L17Rik	NP_080913.1	ILMN_2766493	007380113	S	367	TTTCAACTCGAGAAGGGAAGGAAATAACCTGCCGAAGTTACCTGATGACG	6	-	54936865-54936914	6qB3	Mus musculus RIKEN cDNA A030007L17 gene (A030007L17Rik), mRNA.				AA673177	AA673177
Mus musculus	RefSeq	ILMN_223672	ILMN_223672	GPR75	NM_175490.3	NM_175490.3		237716	47059090	NM_175490.3	Gpr75	NP_780699.2	ILMN_3161775	002750551	S	1339	GGCCCAAGTCACTCAAAGGAAAGTGCAGCGAGTCCCAAAGTTTCTGCTGG	11	+	30792435-30792484	11qA4	Mus musculus G protein-coupled receptor 75 (Gpr75), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	Riken	ILMN_202464	ILMN_202464	5033417D07RIK	ri|5033417D07|PX00037F04|AK017176|1527					AK017176	5033417D07Rik		ILMN_1248036	006020397	S	442	GCAGTAGGTCTTGTCATCGGTGCACCCTGGCAGTCAGTGGCTGTGTTTGC										
Mus musculus	Riken	ILMN_204120	ILMN_204120	B130064I06RIK	ri|B130064I06|PX00158F19|AK045308|1756					AK045308	B130064I06Rik		ILMN_1251625	000060661	S	1035	GCATTTAGAGTCAGCAACTATAGAGAGAGTCGAGGGCCGTCCTGAACACC										
Mus musculus	RefSeq	ILMN_197784	ILMN_310778	LOC100047226	XR_033502.1	XR_033502.1		100047226	149254992	XR_033502.1	LOC100047226		ILMN_1221341	003440600	S	435	TGCAGCCTACAAGGTCTTATTGTCCACCCTGGAGTTGTAGATCAGGATTG					PREDICTED: Mus musculus hypothetical protein LOC100047226 (LOC100047226), misc RNA.					
Mus musculus	RefSeq	ILMN_209143	ILMN_209143	MAGEA9	NM_181855.1	NM_181855.1		195772	32469504	NM_181855.1	Magea9	NP_862903.1	ILMN_1252512	004060121	S	676	GCTGGAAATGCCAAGAAGCTTTTTTCACTGAAACTTTTGTACGGGAAGGG	X	+	70115381-70115430	XqA7.3	Mus musculus melanoma antigen, family A, 9 (Magea9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mage-a9	Mage-a9
Mus musculus	RefSeq	ILMN_198986	ILMN_244015	ZC3H12C	XM_917341.2	XM_917341.2		244871	94385878	XM_917341.2	Zc3h12c	XP_922434.2	ILMN_1218498	001500561	S	2428	CGGCAGACGTACTCCTTACCCGATAATTCCACGCCCCCATGCTATGAGTC				9qA5.3	PREDICTED: Mus musculus zinc finger CCCH type containing 12C (Zc3h12c), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218937	ILMN_249871	ABCC5	NM_013790.2	NM_013790.2		27416	66932953	NM_013790.2	Abcc5	NP_038818.2	ILMN_2702171	001820228	S	3955	TGATGGAATAAGAATCAGTGACATCGGCCTGGCCGACCTCCGAAGCAAAC	16	-	20344753-20344802	16qA3	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 5 (Abcc5), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	MGC116567; Abcc5a; AI132311; Abcc5b; 2900011L11Rik; Mrp5	MGC116567; Abcc5a; AI132311; Abcc5b; 2900011L11Rik; Mrp5
Mus musculus	RefSeq	ILMN_198268	ILMN_198268	LOC225763	XM_123302.2	XM_123302.2			38083481	XM_123302.2	LOC225763		ILMN_1222649	005360564	S	1702	CGGGACGGCTGTGGCAGACCAATGACGGCAGACGAGCTTCAGCATCTTAT										
Mus musculus	RefSeq	ILMN_198181	ILMN_319353	LOC100043332	XM_001479985.1	XM_001479985.1		100043332	149268715	XM_001479985.1	LOC100043332	XP_001480035.1	ILMN_1237797	002450575	S	346	GACTGTGTGGACTTCCTGGAGATAGCAGAACCGGAATGCAGGGACCACCG	17	-	43672024-43672051:43675827-43675848	17qB3	PREDICTED: Mus musculus similar to hCG2042411 (LOC100043332), mRNA.					
Mus musculus	RefSeq	ILMN_188486	ILMN_188486	TXNRD3	NM_153162.3	NM_153162.3		232223	110735448	NM_153162.3	Txnrd3	NP_694802.2	ILMN_2453086	002120743	S	2389	CCTTTCCCAGTTGCTAGTGCTTTGACCCCTCACTTTGTTTCCATGAAGAG	6	+	89625076-89625125	6qD1	Mus musculus thioredoxin reductase 3 (Txnrd3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IDA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a disulfide group [goid 16654] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: thioredoxin + NADP+ = thioredoxin disulfide + NADPH + H+ [goid 4791] [evidence IDA]	AI196535; Tgr; TR2	AI196535; Tgr; TR2
Mus musculus	RefSeq	ILMN_214021	ILMN_214021	OLFR1361	NM_146541.2	NM_146541.2		258534	112983491	NM_146541.2	Olfr1361	NP_666752.1	ILMN_2643367	005050376	S	760	TCTCTCTTCTACGGTACCATCATATACATGTACCTCCAGCCGGCAAACAC	13	-	21750381-21750430	13qA3.1	Mus musculus olfactory receptor 1361 (Olfr1361), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-12; RP23-138F20.2	MOR256-12; RP23-138F20.2
Mus musculus	RefSeq	ILMN_212965	ILMN_212965	PPP1R9A	NM_181595.3	NM_181595.3		243725	118130685	NM_181595.3	Ppp1r9a	NP_853626.1	ILMN_2632092	007000692	S	9295	GCATGGGAGAAACAGCAGTGCCACACCTAATTTGTTCTCTGGCGCTTCGT	6	+	5115409-5115458	6qA1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 9A (Ppp1r9a), mRNA.	The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISO]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISO]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IPI]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810430P21Rik; neurabin-I; BB181831; mKIAA1222; 5330407E15; A230094E16Rik; 4930518N04Rik	2810430P21Rik; neurabin-I; BB181831; mKIAA1222; 5330407E15; A230094E16Rik; 4930518N04Rik
Mus musculus	RefSeq	ILMN_195934	ILMN_256799	PKN1	NM_177262.3	NM_177262.3		320795	32813438	NM_177262.3	Pkn1	NP_796236.2	ILMN_1246525	000630358	S	2731	CACTGAGCGCGATGCAGAAGATGTGAAAAAACAGCCTTTCTTCCGGTCTC	8	-	86194263-86194267:86194638-86194682	8qC2	Mus musculus protein kinase N1 (Pkn1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell [goid 6972] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]	F730027O18Rik; Prkcl1; Pkn; PAK1; DBK; PRK1; Stk3	F730027O18Rik; Prkcl1; Pkn; PAK1; DBK; PRK1; Stk3
Mus musculus	RefSeq	ILMN_256799	ILMN_256799	PKN1	NM_177262.3	NM_177262.3		320795	32813438	NM_177262.3	Pkn1	NP_796236.2	ILMN_2990872	001070451	S	2838	CAGGGCGCACAGATGTCAGCAACTTCGATGAGGAGTTCACTGGGGAGGCC	8	-	86194156-86194205	8qC2	Mus musculus protein kinase N1 (Pkn1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell [goid 6972] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]	F730027O18Rik; Prkcl1; Pkn; PAK1; DBK; PRK1; Stk3	F730027O18Rik; Prkcl1; Pkn; PAK1; DBK; PRK1; Stk3
Mus musculus	RefSeq	ILMN_195934	ILMN_256799	PKN1	NM_177262.3	NM_177262.3		320795	32813438	NM_177262.3	Pkn1	NP_796236.2	ILMN_2603383	005890288	S	1806	TGAATCTCGGTGCTGACTCAGACAGCTCGTCCCAAAAGAGCCCACCAGGG	8	-	86201446-86201495	8qC2	Mus musculus protein kinase N1 (Pkn1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell [goid 6972] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]	F730027O18Rik; Prkcl1; Pkn; PAK1; DBK; PRK1; Stk3	F730027O18Rik; Prkcl1; Pkn; PAK1; DBK; PRK1; Stk3
Mus musculus	RefSeq	ILMN_211901	ILMN_211901	PPP2R5B	NM_198168.3	NM_198168.3		225849	142364854	NM_198168.3	Ppp2r5b	NP_937811.1	ILMN_2620573	000020102	S	2161	TGAGGCCCACGCCTCCCCGTGGCCTTGCCGGAGTGGCTCTAGGACTCCCT	19	-	6228264-6228313	19qA	Mus musculus protein phosphatase 2, regulatory subunit B (B56), beta isoform (Ppp2r5b), mRNA.				BC026670	BC026670
Mus musculus	MEEBO	ILMN_186566	ILMN_186566	GLG1	scl34321.28_401				6677904	NM_009149	Glg1		ILMN_1246601	004880674	S	1	CCCCTGCAGTTCCTTGTTTTTACTGTTCATGCTGTGTAATTTTGAGATGT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211809	ILMN_211809	BC049635	NM_177785.3	NM_177785.3		277773	142375499	NM_177785.3	BC049635	NP_808453.1	ILMN_1260363	007050458	S	1348	CCCAAAGCTCTGCATCGCCCCCAACAAAGGCTGTCACCCGTCATTTCTAC	4	-	42881133-42881182	4qA5	Mus musculus cDNA sequence BC049635 (BC049635), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-124L1.1; 4931430D02; MGC58387	RP23-124L1.1; 4931430D02; MGC58387
Mus musculus	MEEBO	ILMN_218897	ILMN_218897	STRBP	scl0020744.1_165	NM_009261.1			6678108	NM_009261.1	Strbp		ILMN_1223596	004250538	S	2675	GACATGCTCTCTCTCTTAATCTGGGCAATGGTAGAAACTCATGCAGGCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	Behavior that is dependent upon the sensation of a mechanical stimulus [goid 7638] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]; Interacting selectively with single-stranded RNA [goid 3727] [evidence IDA]		
Mus musculus	MEEBO	ILMN_218897	ILMN_218897	STRBP	scl0020744.1_165	NM_009261.1			6678108	NM_009261.1	Strbp		ILMN_2701637	005910450	S	2725	CCACTGAGGAGGTCTGCACTTTATACAGAGTCCTTTTCGGGTTCAATGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	Behavior that is dependent upon the sensation of a mechanical stimulus [goid 7638] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]; Interacting selectively with single-stranded RNA [goid 3727] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209774	ILMN_209774	MOCS2	NM_013826.2	NM_013826.2		17434	118130892	NM_013826.2	Mocs2	NP_038854.1	ILMN_1229613	002070494	S	732	GATGTCTGCAATAGACTCAGCCTTCTGTGACTAACTCCTAACTAACCAGC	13	+	115618709-115618758	13qD2.2	Mus musculus molybdenum cofactor synthesis 2 (Mocs2), mRNA.		The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione [goid 6790] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	AI415403	AI415403
Mus musculus	RefSeq	ILMN_214217	ILMN_214217	BCAP29	NM_007530.2	NM_007530.2		12033	31982865	NM_007530.2	Bcap29	NP_031556.1	ILMN_2866752	002760349	S	1513	CAGCACTGTTGATAGTGTGTGTTGCTACTGTGCTTCTGTGCCTATAAGAC	12	-	32280612-32280661	12qA3	Mus musculus B-cell receptor-associated protein 29 (Bcap29), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Bap29; AW208404	Bap29; AW208404
Mus musculus	RefSeq	ILMN_214217	ILMN_214217	BCAP29	NM_007530.2	NM_007530.2		12033	31982865	NM_007530.2	Bcap29	NP_031556.1	ILMN_2645620	004050246	S	1458	CTACGGCCTTAGGGCTCTTCAAGCCTCATGATTGTACAACCTACTCGAAA	12	-	32280667-32280716	12qA3	Mus musculus B-cell receptor-associated protein 29 (Bcap29), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Bap29; AW208404	Bap29; AW208404
Mus musculus	RefSeq	ILMN_251763	ILMN_251763	PORCN	NM_145908.1	NM_145908.1		53627	22094144	NM_145908.1	Porcn	NP_665915.1	ILMN_3093626	000050519	A	1679	GGAACACACACAACTTTCTATGCCTGTCAATCCTCACCCCGCCACCAGGC	X	-	7350943-7350992	XqA1.1	Mus musculus porcupine homolog (Drosophila) (Porcn), transcript variant Mporc-b, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The chemical reactions and pathways involving glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9100] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mporc; DXHXS7465e; porc; Ppn; Mporc-b; Mporc-a; Mporc-d; Mporc-c; 2410004O13Rik; mMg61; AW045557	Mporc; DXHXS7465e; porc; Ppn; Mporc-b; Mporc-a; Mporc-d; Mporc-c; 2410004O13Rik; mMg61; AW045557
Mus musculus	RefSeq	ILMN_219308	ILMN_219308	CAPN8	NM_130890.1	NM_130890.1		170725	18700033	NM_130890.1	Capn8	NP_570960.1	ILMN_2723789	006350706	S	2037	GACGGTTTTGTGGCTTGTATGATCCGCCTGGAGATCCTGTTCAAATTGTT	1	+	184558805-184558846:184560233-184560240	1qH5	Mus musculus calpain 8 (Capn8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]	nCL-2; nCL-2'; MGC159211; MGC159207	nCL-2; nCL-2'; MGC159211; MGC159207
Mus musculus	RefSeq	ILMN_219308	ILMN_219308	CAPN8	NM_130890.1	NM_130890.1		170725	18700033	NM_130890.1	Capn8	NP_570960.1	ILMN_2805144	006770209	S	2025	GGTGTTGATTTTGACGGTTTTGTGGCTTGTATGATCCGCCTGGAGATCCT	1	+	184558793-184558842	1qH5	Mus musculus calpain 8 (Capn8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]	nCL-2; nCL-2'; MGC159211; MGC159207	nCL-2; nCL-2'; MGC159211; MGC159207
Mus musculus	RefSeq	ILMN_219308	ILMN_219308	CAPN8	NM_130890.1	NM_130890.1		170725	18700033	NM_130890.1	Capn8	NP_570960.1	ILMN_2707071	005360521	S	1114	AATGGAACCTGGTACTCTTCAACGGCCGCTGGACACGGGGTTCTACAGCC	1	+	184534661-184534710	1qH5	Mus musculus calpain 8 (Capn8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]	nCL-2; nCL-2'; MGC159211; MGC159207	nCL-2; nCL-2'; MGC159211; MGC159207
Mus musculus	MEEBO	ILMN_189991	ILMN_189991	SYT1	scl37517.13_240				31543795	NM_009306	Syt1		ILMN_2608416	004390703	S	3510	CAATCTCCAAACCCTGGTTCTTCCCTCATTGGAGAAGAGGCAAAGCCTTT						A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IDA]	Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence TAS]		
Mus musculus	MEEBO	ILMN_189991	ILMN_189991	SYT1	scl37517.13_240				31543795	NM_009306	Syt1		ILMN_1224963	005490296	S	2	GCTCGTGGCCCGCGAGCCAACTCCTTTAGCTGTATTCTTCCTTCATTTTT						A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IDA]	Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence TAS]		
Mus musculus	Riken	ILMN_203911	ILMN_203911	9630024J24RIK	ri|9630024J24|PX00116G21|AK035982|1388					AK035982	9630024J24Rik		ILMN_1233435	006020048	S	1195	GAGCTGTAACTGGCTGGACCTGAAAGGACAAGTGGGAAAGCGGCTGCCAG										
Mus musculus	Riken	ILMN_205513	ILMN_205513	D130056F09RIK	ri|D130056F09|PX00184H14|AK051552|2087					AK051552	D130056F09Rik		ILMN_1255920	003130195	S	1800	CCCACCAGAGACCTAATAAACTCCACCCAGTCCTGTCTGAGGAGCTAAGC										
Mus musculus	RefSeq	ILMN_199675	ILMN_227698	LOC669994	XR_002743.1	XR_002743.1		669994	94397957	XR_002743.1	LOC669994		ILMN_1240265	007200497	S	2293	CAGATTCTCAGCTTCCTAGAGAGCATGGCCAGTGGTACCCTCCACCTGCG					PREDICTED: Mus musculus similar to chromosome 10 open reading frame 64 (LOC669994), mRNA.					
Mus musculus	RefSeq	ILMN_220472	ILMN_220472	THUMPD1	NM_145585.1	NM_145585.1		233802	21704175	NM_145585.1	Thumpd1	NP_663560.1	ILMN_2722488	004280156	S	2254	GTCCCTACTGGCTATTTGCCAGTTGTACAGTGCTGTGTGCTCTTGGGATC	7	-	126858959-126859008	7qF2	Mus musculus THUMP domain containing 1 (Thumpd1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC7161; 6330575P11Rik	MGC7161; 6330575P11Rik
Mus musculus	Riken	ILMN_205045	ILMN_205045	A830024H12RIK	ri|A830024H12|PX00154D01|AK043722|1489					AK043722	A830024H12Rik		ILMN_1260187	003420386	S	1222	GTGGCACCCATCATGTCTCTTAGTAGAGCAGCCCGTGTGTACAGAGCTCA										
Mus musculus	RefSeq	ILMN_222743	ILMN_243303	KCND3	NM_001039347.1	NM_001039347.1		56543	86991433	NM_001039347.1	Kcnd3	NP_001034436.1	ILMN_2754136	000670082	S	2195	AAGCAGACGATGGACTGAGACCAAACTGCAAAACATCCCAGATTACCACG	3	+	105471946-105471995	3qF2.2	Mus musculus potassium voltage-gated channel, Shal-related family, member 3 (Kcnd3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Kncd3; AW045978	Kncd3; AW045978
Mus musculus	RefSeq	ILMN_211102	ILMN_211102	CYYR1	NM_144853.3	NM_144853.3		224405	118130051	NM_144853.3	Cyyr1	NP_659102.1	ILMN_2612532	005270068	S	755	GACAATTAGCAATTTTACCCAGAACAAAATGCCTCAACTTAGAAACATGC	16	-	85457718-85457759:85457760-85457767	16qC3.3	Mus musculus cysteine and tyrosine-rich protein 1 (Cyyr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC107464	MGC107464
Mus musculus	MEEBO	ILMN_221885	ILMN_221885	9430093N24RIK	scl0320924.5_4	NM_178793.2			31342026	NM_178793.2	9430093N24Rik		ILMN_2741598	007560497	S	696	CCGCTGAACTGGGCAAGTATGTCAATGGTGACAAGGTACTGGCCTCAAAC										
Mus musculus	RefSeq	ILMN_207499	ILMN_207499	4933413B09RIK	XM_148384.1	XM_148384.1			20891620	XM_148384.1	4933413B09Rik		ILMN_1260482	004610041	I	1140	AGCTGATGGCCCCTGGACCGGGAAAGGTCCGAAAGCGAGCAAACAAGGAT										
Mus musculus	RefSeq	ILMN_199379	ILMN_199379	FBXW15	NM_199036.2	NM_199036.2		382105	115299772	NM_199036.2	Fbxw15	NP_950201.2	ILMN_2535043	002350360	S	1385	GCTCAGCCTCAGCTCTCTGACTTCATATGCCTTGAACATCTGCTCTTGAA	9	-	109455176-109455177:109455178-109455225	9qF2	Mus musculus F-box and WD-40 domain protein 15 (Fbxw15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]			MGC117507	MGC117507
Mus musculus	Riken	ILMN_206835	ILMN_206835	MTAP2	ri|D930031J16|PX00202L13|AK086484|3047					AK086484	Mtap2		ILMN_1240895	006100195	S	2544	CAAAAGTCTGCTGAAGGGAGAATGGTTATTGACGCCTCTCACTCAGTGGG						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209782	ILMN_209782	PRPF38A	NM_172697.2	NM_172697.2		230596	142385028	NM_172697.2	Prpf38a	NP_766285.1	ILMN_2630704	001030427	S	1421	TTAGCAGGGTCAAGAAGACCTGGGAATTTGAGAGGTAAAAAGATGTGATC	4	-	108237511-108237560	4qC7	Mus musculus PRP38 pre-mRNA processing factor 38 (yeast) domain containing A (Prpf38a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		2410002M20Rik	2410002M20Rik
Mus musculus	RefSeq	ILMN_209782	ILMN_209782	PRPF38A	NM_172697.2	NM_172697.2		230596	142385028	NM_172697.2	Prpf38a	NP_766285.1	ILMN_2599164	001990097	S	639	GCATGTAGATGAGTTCATTTATGAACTCCTGCACAGTGAGAGAGTCTGTG	4	-	108245433-108245482	4qC7	Mus musculus PRP38 pre-mRNA processing factor 38 (yeast) domain containing A (Prpf38a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		2410002M20Rik	2410002M20Rik
Mus musculus	RefSeq	ILMN_184564	ILMN_184564	TRPM5	NM_020277.1	NM_020277.1		56843	12383053	NM_020277.1	Trpm5	NP_064673.1	ILMN_2859192	001400242	S	3637	CTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAG	7	-	150264338-150264387	7qF5	Mus musculus transient receptor potential cation channel, subfamily M, member 5 (Trpm5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	9430099A16Rik; Ltrpc5; Mtr1	9430099A16Rik; Ltrpc5; Mtr1
Mus musculus	RefSeq	ILMN_200730	ILMN_200730	LOC383469	XM_357084.1	XM_357084.1			38085662	XM_357084.1	LOC383469		ILMN_1256269	006770452	S	383	TGATCAGCAACTGCAGCCCAGCTACGGTTATGGAAAGACCAAGGCTTGCC										
Mus musculus	RefSeq	ILMN_223577	ILMN_223577	TCFAP2C	NM_009335.1	NM_009335.1		21420	6678252	NM_009335.1	Tcfap2c	NP_033361.1	ILMN_2783226	000050139	S	2389	CCCTAAGTCCCCGAGGAGGCTCCGTGCTGAGAAACTGTTGAGTGTACAGA	2	+	172383694-172383743	2qH3	Mus musculus transcription factor AP-2, gamma (Tcfap2c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AA409384; Ap-2.2	AA409384; Ap-2.2
Mus musculus	RefSeq	ILMN_223577	ILMN_223577	TCFAP2C	NM_009335.1	NM_009335.1		21420	6678252	NM_009335.1	Tcfap2c	NP_033361.1	ILMN_1231632	003780711	S	1681	CGCCCGCCCACACCGCACTCTGGACCTGCCCTCTTGGAGTCTTTGTGACT	2	+	172382986-172383035	2qH3	Mus musculus transcription factor AP-2, gamma (Tcfap2c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AA409384; Ap-2.2	AA409384; Ap-2.2
Mus musculus	RefSeq	ILMN_223577	ILMN_223577	TCFAP2C	NM_009335.1	NM_009335.1		21420	6678252	NM_009335.1	Tcfap2c	NP_033361.1	ILMN_2783225	004180167	S	2703	TTGTGTGGGTGACGTGTGGATTGGGACTGGACCTCTAAGCCTGTCCGTGC	2	+	172384008-172384057	2qH3	Mus musculus transcription factor AP-2, gamma (Tcfap2c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AA409384; Ap-2.2	AA409384; Ap-2.2
Mus musculus	MEEBO	ILMN_192482	ILMN_192482	SCL0003541.1_1	scl0003541.1_1	AK077713.1			26346648	AK077713.1	scl0003541.1_1		ILMN_1237801	000990528	S	4	GTTCGACAGCTGGAAGAACAGTTAAGAATAATGGATCAGACCTTGAAAGC										
Mus musculus	RefSeq	ILMN_186462	ILMN_186462	WTAP	NM_175394.1	NM_175394.1		60532	33946270	NM_175394.1	Wtap	NP_780603.1	ILMN_2435756	003360193	S	3131	ATGGTATTCCTGCCCTTTGCTGCAGGTCTAATTTTGAGGGATAAAGATCT	17	-	13165679-13165728	17qA1	Mus musculus Wilms' tumour 1-associating protein (Wtap), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		9430038B09Rik; 2810408K05Rik	9430038B09Rik; 2810408K05Rik
Mus musculus	RefSeq	ILMN_186462	ILMN_186462	WTAP	NM_175394.1	NM_175394.1		60532	33946270	NM_175394.1	Wtap	NP_780603.1	ILMN_2491016	000360739	S	16	GCACCTAAAGATGTATGGTGGAAAAACTTTATCTAACGCTGAAACTACTA	17	-	13185347-13185396	17qA1	Mus musculus Wilms' tumour 1-associating protein (Wtap), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		9430038B09Rik; 2810408K05Rik	9430038B09Rik; 2810408K05Rik
Mus musculus	RefSeq	ILMN_186462	ILMN_186462	WTAP	NM_175394.1	NM_175394.1		60532	33946270	NM_175394.1	Wtap	NP_780603.1	ILMN_2500548	002100360	S	11	TTCAGCGTTAGATAAAGTTTTTCCACCATACATCTTTAGGTGCATTCATC	17	-	13185352-13185401	17qA1	Mus musculus Wilms' tumour 1-associating protein (Wtap), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		9430038B09Rik; 2810408K05Rik	9430038B09Rik; 2810408K05Rik
Mus musculus	MEEBO	ILMN_223018	ILMN_223018	GCAT	scl026912.9_26				31560487	NM_013847	Gcat		ILMN_2777696	007400612	S	1362	GACTTCTAGAGCCTGGTTGAAAATGGGCCTGTACTTGTCATCAGAGAGAC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + glycine = CoA + 2-amino-3-oxobutanoate [goid 8890] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210406	ILMN_210406	SCG3	NM_009130.1	NM_009130.1		20255	6677866	NM_009130.1	Scg3	NP_033156.1	ILMN_2856986	002630079	S	1661	CTCGACAAGGAAGAAGCCAACGCCATCAAACGCATCTACAGCAGCCTGTG	9	-	75429732-75429734:75429735-75429781	9qD	Mus musculus secretogranin III (Scg3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AI385542; Chgd; SgIII; 1B1075	AI385542; Chgd; SgIII; 1B1075
Mus musculus	MEEBO	ILMN_216513	ILMN_216513	4930431F12RIK	scl27846.9.1_271				51710983	XM_485602	4930431F12Rik		ILMN_2671970	003310204	S	2142	TCATAAATTTTGCAAATCTACAAAATTGGAATTTTATTATTTTCATCACA										
Mus musculus	RefSeq	ILMN_215483	ILMN_215483	SLC25A5	NM_007451.3	NM_007451.3		11740	142360208	NM_007451.3	Slc25a5	NP_031477.1	ILMN_2660099	005870092	S	967	ATACACATAATTATGTCCTAGGTGTTCTCCCCGAGAACAGGCATGTTGTA	X	+	34338530-34338539:34338540-34338579	XqA3.3	Mus musculus solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5 (Slc25a5), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC101927; Ant2	MGC101927; Ant2
Mus musculus	RefSeq	ILMN_195577	ILMN_195577	ZHX2	NM_199449.2	NM_199449.2		387609	114326467	NM_199449.2	Zhx2	NP_955520.1	ILMN_2516833	006350201	S	3979	CACCACCTTTTCTTGGTGTGGCTTTTGGCAAGATTTCAGCTCAAAGCCTC	15	+	57670992-57671041	15qD1	Mus musculus zinc fingers and homeoboxes 2 (Zhx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Afr-1; Afr1; mKIAA0854; Raf	Afr-1; Afr1; mKIAA0854; Raf
Mus musculus	RefSeq	ILMN_210688	ILMN_210688	KLF8	NM_173780.4	NM_173780.4		245671	146198805	NM_173780.4	Klf8	NP_776141.1	ILMN_2608214	003800722	S	4032	GGTTTGATGGATTAGTGGAGTTCATTATGTACAAACCCACGAATGTTTGT				XqF3	Mus musculus Kruppel-like factor 8 (Klf8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ZNF74; BKLF3; A830097P10Rik	ZNF74; BKLF3; A830097P10Rik
Mus musculus	Riken	ILMN_202432	ILMN_202432	HMG20A	ri|5730490E10|PX00005O21|AK017716|1699					AK017716	Hmg20a		ILMN_1228489	006590075	S	1386	CAGAAGTGGGGTGTCCTCAGACCATCAAGACTGCTAAAACCTGGAGCTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210193	ILMN_236207	1700008O03RIK	XM_917139.3	XM_917139.3		69349	149257128	XM_917139.3	1700008O03Rik	XP_922232.2	ILMN_2603147	001090609	S	487	GGGCCATGGAAAGCGGGCGCGTGAACAGCATCCGCTACGAGAATATGAAT				7qB4	PREDICTED: Mus musculus RIKEN cDNA 1700008O03 gene, transcript variant 3 (1700008O03Rik), mRNA.					
Mus musculus	MEEBO	ILMN_224145	ILMN_224145	4930526D03RIK	scl0277496.2_7				39841044	NM_199023	4930526D03Rik		ILMN_1222484	005690730	S	467	AAATCTCTTTGCTGATCCAGAAGCAGAGCTCCGCGCGCGCTGCCATCCGA										
Mus musculus	RefSeq	ILMN_199918	ILMN_199918	LOC381571	XM_355533.1	XM_355533.1			38078971	XM_355533.1	LOC381571		ILMN_2536956	000670300	S	243	CCCTTGCCTGAATATGGTGATCTGTCGCCATTGTCCAGATCAGGATGACT										
Mus musculus	Riken	ILMN_207294	ILMN_207294	4632408I12RIK	ri|4632408I12|PX00637I02|AK076276|2782					AK076276	4632408I12Rik		ILMN_1242082	002630471	S	2688	CTACACTGTACAAAACCAGAGCAACTCAATAGTTTCCAGGGTGGGCGGGG										
Mus musculus	RefSeq	ILMN_197171	ILMN_230174	2010003H20RIK	NM_001081310.2	NM_001081310.2		625286	148224958	NM_001081310.2	2010003H20Rik	NP_001074779.1	ILMN_1219704	004610520	S	720	TAGGACGATGTCTCAAAGAGATGTTCGGGCGGAGCTGTTCCTGCGAAGCT				2qA2	Mus musculus RIKEN cDNA 2010003H20 gene (2010003H20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_185061	ILMN_228863	CDH13	NM_019707.4	NM_019707.4		12554	153792365	NM_019707.4	Cdh13	NP_062681.2	ILMN_2659503	006760195	S	201	AGTGTTACACATCCACCAGCCTGCCGAATTCATCGAGGACCAGCCTGTCC				8qE1	Mus musculus cadherin 13 (Cdh13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with adiponectin, a protein hormone produced by adipose tissue that modulates a number of metabolic processes, including glucose regulation and fatty acid catabolism [goid 55100] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	4932416G01Rik; Cdht; T-cadherin; Tcad	4932416G01Rik; Cdht; T-cadherin; Tcad
Mus musculus	RefSeq	ILMN_185061	ILMN_228863	CDH13	NM_019707.4	NM_019707.4		12554	153792365	NM_019707.4	Cdh13	NP_062681.2	ILMN_2592321	004040025	S	1992	CTGGAAGATCTCCAAAATCAACAACACCCACGCCCTCGTGAGCCTTCTTC				8qE1	Mus musculus cadherin 13 (Cdh13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with adiponectin, a protein hormone produced by adipose tissue that modulates a number of metabolic processes, including glucose regulation and fatty acid catabolism [goid 55100] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	4932416G01Rik; Cdht; T-cadherin; Tcad	4932416G01Rik; Cdht; T-cadherin; Tcad
Mus musculus	MEEBO	ILMN_208756	ILMN_208756	SLC24A2	scl0076376.1_316	NM_172426.1			27369562	NM_172426.1	Slc24a2		ILMN_1216404	002760092	S	1142	TCTCGCAATAATGTTATCAAGGTGACAGTGCCAGAAGCCCAAGCAAAGTC										
Mus musculus	RefSeq	ILMN_216803	ILMN_216803	SFXN1	NM_027324.4	NM_027324.4		14057	145301601	NM_027324.4	Sfxn1	NP_081600.1	ILMN_1233606	002900592	S	1133	GCCTCTACAAGATCTTCGTTAAGAGTCAAGCTGCCGGTCAGGAGTCTGAC				13qB1	Mus musculus sideroflexin 1 (Sfxn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence TAS]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	f; A930015P12Rik; 2810002O05Rik	f; A930015P12Rik; 2810002O05Rik
Mus musculus	RefSeq	ILMN_216803	ILMN_216803	SFXN1	NM_027324.4	NM_027324.4		14057	145301601	NM_027324.4	Sfxn1	NP_081600.1	ILMN_2675569	004180577	S	2683	CAGCTATCAGTATTAGCGAGGTGTCTTGCCGATATCAGAGTCAGTGTGTC				13qB1	Mus musculus sideroflexin 1 (Sfxn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence TAS]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	f; A930015P12Rik; 2810002O05Rik	f; A930015P12Rik; 2810002O05Rik
Mus musculus	MEEBO	ILMN_192212	ILMN_192212	RAPGEF5	scl42691.1.1_74				31341676	NM_175930	Rapgef5		ILMN_2717716	004830142	S	2405	AGCAAGGTAGACTGGGTTTCTCATCCAATAAGGAGCTTGGCATTGTTCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192212	ILMN_192212	RAPGEF5	scl42691.1.1_74				31341676	NM_175930	Rapgef5		ILMN_1242902	004290634	S	2643	GCAGAACATCAACCCATGAGGGAGGGTGAGTGAAGCCAAGTATATGAAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201942	ILMN_261731	9130008F23RIK	NM_027834.2	NM_027834.2		71583	142383729	NM_027834.2	9130008F23Rik	NP_082110.1	ILMN_1236953	002140386	S	1077	GCTAGCCCAGGCTTACTTTGGACTTGGTGTCTAGCCTGTGATGGCTAACC	17	-	41013457-41013506	17qB2	Mus musculus RIKEN cDNA 9130008F23 gene (9130008F23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194007	ILMN_261731	9130008F23RIK	NM_027834.2	NM_027834.2		71583	142383729	NM_027834.2	9130008F23Rik	NP_082110.1	ILMN_1220766	004200402	S	2084	CTTTCACTGAACATGACCCTTAAGAGAATAAAGGATAAGCTTTATTTGCA	17	-	41012450-41012499	17qB2	Mus musculus RIKEN cDNA 9130008F23 gene (9130008F23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220628	ILMN_243322	EG232801	NM_001081239.1	NM_001081239.1		232801	124486980	NM_001081239.1	EG232801	NP_001074708.1	ILMN_2724603	004570544	S	1959	AGGCTGTACAAAGGAACCTGAACATTCTATGGAAAGAAGAGATACTATTG	7	+	4194921-4194970	7qA1	Mus musculus predicted gene, EG232801 (EG232801), mRNA.				E030017K20; Lilrc1	E030017K20; Lilrc1
Mus musculus	RefSeq	ILMN_243322	ILMN_243322	EG232801	NM_001081239.1	NM_001081239.1		232801	124486980	NM_001081239.1	EG232801	NP_001074708.1	ILMN_2784514	006590379	S	303	CCCCCACTGGGTGGTCAGAGCACAGTGACCCTCTAGAGCTTGCAGTGACA	7	+	4189972-4190021	7qA1	Mus musculus predicted gene, EG232801 (EG232801), mRNA.				E030017K20; Lilrc1	E030017K20; Lilrc1
Mus musculus	Riken	ILMN_202515	ILMN_202515	5330402L21RIK	ri|5330402L21|PX00053A21|AK017232|1629					AK017232	5330402L21Rik		ILMN_2550197	007050452	S	1428	CTCTCCCAGACTCTCACTGAGTAGCACAGCTTCCTTGGAAAATGCTAGAG										
Mus musculus	MEEBO	ILMN_220071	ILMN_220071	AMOT	scl53754.13.1_160	NM_153319.1			23503332	NM_153319.1	Amot		ILMN_1220506	004860044	S	2607	TCCTGCAAATCCAGGTGCCAGTTCCGGACCACGCCGCTTGTCTACACCAA						A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISO]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISO]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of embryonic development [goid 40019] [evidence IMP]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence ISO]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISO]		
Mus musculus	Riken	ILMN_205844	ILMN_205844	A730041H09RIK	ri|A730041H09|PX00150B19|AK042935|2147					AK042935	A730041H09Rik		ILMN_1216682	002480521	S	1740	GCCTAGGCCTAAGTTAGCAGACGGAGGCAGTGGCCAATATTTACAACAGG										
Mus musculus	Riken	ILMN_207150	ILMN_207150	F730045P10RIK	ri|F730045P10|PL00003J02|AK089525|1605					AK089525	F730045P10Rik		ILMN_1245300	004640754	S	1383	TGTCATGGATGGCGACTCCCTTTGTGGCAACTCCCAACACTCCTGAGCCG										
Mus musculus	MEEBO	ILMN_218031	ILMN_218031	C330001K17RIK	scl36126.13.1_36	XM_134745.2			28490265	XM_134745.2	C330001K17Rik		ILMN_1214455	006220239	S	1898	TCGAAGCCCGCAGCAAGAAGCGCAATAGGTTGCGCAGATCTTAGACTCGC										
Mus musculus	RefSeq	ILMN_216654	ILMN_252836	SBF1	NM_001081030.1	NM_001081030.1		77980	124486641	NM_001081030.1	Sbf1	NP_001074499.1	ILMN_2692351	004830196	S	581	CGCCAAAGACTCTGGTTCTGGTGTCTCGACTGGACCATGCCGAAGTGTTC	15	-	89138120-89138169	15qE3	Mus musculus SET binding factor 1 (Sbf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Maintains the phosphorylation state of certain molecules by associating with them and preventing them from associating with active phosphatases, and thus inhibiting the enzyme activity without interacting with the enzyme. Often pertains to proteins belonging to dual-specificity phosphatase family but lacking critical active site residues [goid 1691] [evidence TAS]	B230113C15Rik; 2610510A08Rik; MGC37151; Mtmr5; mKIAA3020	B230113C15Rik; 2610510A08Rik; MGC37151; Mtmr5; mKIAA3020
Mus musculus	RefSeq	ILMN_252836	ILMN_252836	SBF1	NM_001081030.1	NM_001081030.1		77980	124486641	NM_001081030.1	Sbf1	NP_001074499.1	ILMN_3139818	000510524	A	6055	TGGGCTTGTAAATAGTCCACCCTACCCGGCCCATCAGTGTGCTGGCCCTG	15	-	89118776-89118825	15qE3	Mus musculus SET binding factor 1 (Sbf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Maintains the phosphorylation state of certain molecules by associating with them and preventing them from associating with active phosphatases, and thus inhibiting the enzyme activity without interacting with the enzyme. Often pertains to proteins belonging to dual-specificity phosphatase family but lacking critical active site residues [goid 1691] [evidence TAS]	B230113C15Rik; 2610510A08Rik; MGC37151; Mtmr5; mKIAA3020	B230113C15Rik; 2610510A08Rik; MGC37151; Mtmr5; mKIAA3020
Mus musculus	MEEBO	ILMN_224212	ILMN_224212	KLF16	scl37728.2_209				17505215	NM_078477	Klf16		ILMN_2776651	005550646	S	2481	CTGATTGATTAACTGGGACTTGGGTCTAACCATTGAAGGGTGATGAACGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218652	ILMN_218652	GPR61	NM_175470.3	NM_175470.3		229714	142357360	NM_175470.3	Gpr61	NP_780679.1	ILMN_1254930	007000619	S	3254	GGCTCACTCAACATGAAAGGGGGAAAGTGGGTTGGGGTGGAGTAGTTTCC	3	-	107951621-107951670	3qF2.3	Mus musculus G protein-coupled receptor 61 (Gpr61), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222181	ILMN_222181	SNAPC1	NM_178392.4	NM_178392.4		75627	142386213	NM_178392.4	Snapc1	NP_848479.1	ILMN_2745849	000510373	S	1447	GTGTTAAACTTGTTAGACTTGTTAGGGGTCTGTATGAGTGGAGATAGAGT	12	+	75085129-75085178	12qC3	Mus musculus small nuclear RNA activating complex, polypeptide 1 (Snapc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AU015787; 2700033G17Rik	AU015787; 2700033G17Rik
Mus musculus	RefSeq	ILMN_222678	ILMN_222678	BC107230	NM_153172.1	NM_153172.1		260408	23346625	NM_153172.1	BC107230	NP_694812.1	ILMN_1245069	006280379	S	1023	CCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGCAACGG	9	+	110743605-110743654	9qF3	Mus musculus cDNA sequence BC107230 (BC107230), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MGC130166; MGC130165; Tessp5	MGC130166; MGC130165; Tessp5
Mus musculus	RefSeq	ILMN_211030	ILMN_211030	1300010M03RIK	NM_028933.1	NM_028933.1		67998	28077024	NM_028933.1	1300010M03Rik	NP_083209.1	ILMN_1225106	003120152	S	2998	CGTTGTGTACTTCCTTGATAAGTCTTCTCATTAATCTGATAATAGCTAAT	11	-	100912543-100912592	11qD	Mus musculus RIKEN cDNA 1300010M03 gene (1300010M03Rik), transcript variant 2, mRNA.				4933404C01Rik; AI551748	4933404C01Rik; AI551748
Mus musculus	Riken	ILMN_203774	ILMN_203774	A230061N24RIK	ri|A230061N24|PX00128G01|AK038775|4950					AK038775	A230061N24Rik		ILMN_1259711	006860270	S	4653	CGGGCCGATGAGGGACTGATGGTATTGTGCTCATTTGAGGCCCAGAGCAG										
Mus musculus	RefSeq	ILMN_218521	ILMN_218521	CHPT1	NM_144807.2	NM_144807.2		212862	38604066	NM_144807.2	Chpt1	NP_659056.2	ILMN_2740152	003990037	S	378	GCTCTCCCTTAGGGGAACTATTTGATCATGGTTGTGACTCTCTTTCCACA	10	-	87952327-87952376	10qC1	Mus musculus choline phosphotransferase 1 (Chpt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Catalysis of the reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine [goid 4142] [evidence IEA]	MGC28885	MGC28885
Mus musculus	RefSeq	ILMN_218521	ILMN_218521	CHPT1	NM_144807.2	NM_144807.2		212862	38604066	NM_144807.2	Chpt1	NP_659056.2	ILMN_2740151	004010356	S	377	TGCTCTCCCTTAGGGGAACTATTTGATCATGGTTGTGACTCTCTTTCCAC	10	-	87952328-87952377	10qC1	Mus musculus choline phosphotransferase 1 (Chpt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Catalysis of the reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine [goid 4142] [evidence IEA]	MGC28885	MGC28885
Mus musculus	RefSeq	ILMN_218521	ILMN_218521	CHPT1	NM_144807.2	NM_144807.2		212862	38604066	NM_144807.2	Chpt1	NP_659056.2	ILMN_2740149	007330274	S	366	GGACAAACTCTTGCTCTCCCTTAGGGGAACTATTTGATCATGGTTGTGAC	10	-	87952339-87952388	10qC1	Mus musculus choline phosphotransferase 1 (Chpt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Catalysis of the reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine [goid 4142] [evidence IEA]	MGC28885	MGC28885
Mus musculus	RefSeq	ILMN_224206	ILMN_232760	CORO6	NM_139130.2	NM_139130.2		216961	118129989	NM_139130.2	Coro6	NP_624356.1	ILMN_2776578	004180377	S	693	TCATATCTTCACCACGGGATTCACCCGCATGAGCCAGCGAGAGCTAGGCC	11	+	77281311-77281360	11qB5	Mus musculus coronin 6 (Coro6), transcript variant B, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_215987	ILMN_215987	APOH	NM_013475.3	NM_013475.3		11818	94400778	NM_013475.3	Apoh	NP_038503.3	ILMN_1243128	007550086	S	1050	CAGAACTGACACCGTGCTGAAGTCGTTTCCAGAATCAAAATTGAATGTCG	11	+	108275590-108275609:108275610-108275639	11qE1	Mus musculus apolipoprotein H (Apoh), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of blood coagulation [goid 30193] [evidence IMP]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	beta-2-GPI; B2GPI; beta2-GPI	beta-2-GPI; B2GPI; beta2-GPI
Mus musculus	RefSeq	ILMN_213292	ILMN_213292	ACTL6B	NM_031404.4	NM_031404.4		83766	145386507	NM_031404.4	Actl6b	NP_113581.1	ILMN_2696182	004060338	S	1380	AATACCCGTCCACCCCATCCACGGAGAAACGCCAGAGGGGCGTTCTACCA				5qG2	Mus musculus actin-like 6B (Actl6b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence IDA]	The formation or destruction of chromatin structures [goid 6333] [evidence IC ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	Baf53b; Actl6; ArpNa	Baf53b; Actl6; ArpNa
Mus musculus	RefSeq	ILMN_213292	ILMN_213292	ACTL6B	NM_031404.4	NM_031404.4		83766	145386507	NM_031404.4	Actl6b	NP_113581.1	ILMN_1237413	002650398	S	107	TGAGGTGGGGGCGCTCGTCTTTGACATTGGCTCTTTCTCAGTCCGAGCTG				5qG2	Mus musculus actin-like 6B (Actl6b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence IDA]	The formation or destruction of chromatin structures [goid 6333] [evidence IC ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	Baf53b; Actl6; ArpNa	Baf53b; Actl6; ArpNa
Mus musculus	RefSeq	ILMN_213292	ILMN_213292	ACTL6B	NM_031404.4	NM_031404.4		83766	145386507	NM_031404.4	Actl6b	NP_113581.1	ILMN_2707416	007330215	S	394	GCAAACATGTCAAGTCCGAGCCAAACCTGCACCCAGTACTCATGTCGGAG				5qG2	Mus musculus actin-like 6B (Actl6b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence IDA]	The formation or destruction of chromatin structures [goid 6333] [evidence IC ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	Baf53b; Actl6; ArpNa	Baf53b; Actl6; ArpNa
Mus musculus	Riken	ILMN_207275	ILMN_207275	RAB3IP1-PENDING	ri|G630010A09|PL00013I17|AK090169|1558					AK090169	Rab3ip1-pending		ILMN_2586370	002060259	S	1090	GCAGGAGGAGACAAGGTATACAGACTTGGTACAGACAAGACATCAAGTTC										
Mus musculus	RefSeq	ILMN_188426	ILMN_188426	TRIM9	NM_053167.2	NM_053167.2		94090	142374604	NM_053167.2	Trim9	NP_444397.1	ILMN_1246118	000160682	S	2789	GATGGCTCCTACCAGGCCCCAGGAATGCCCAGGAAAAGCAAATCTTAGGC	12	-	71348930-71348979	12qC2	Mus musculus tripartite motif protein 9 (Trim9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]	Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	C030048G07Rik; AI835002; mKIAA0282	C030048G07Rik; AI835002; mKIAA0282
Mus musculus	RefSeq	ILMN_188426	ILMN_188426	TRIM9	NM_053167.2	NM_053167.2		94090	142374604	NM_053167.2	Trim9	NP_444397.1	ILMN_2452579	004540139	S	2114	TGACAGTGACGTGCAGTAGCTACGATGACCGGGTGGTGCTGGGGAAAACC	12	-	71352134-71352183	12qC2	Mus musculus tripartite motif protein 9 (Trim9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]	Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	C030048G07Rik; AI835002; mKIAA0282	C030048G07Rik; AI835002; mKIAA0282
Mus musculus	RefSeq	ILMN_188426	ILMN_188426	TRIM9	NM_053167.2	NM_053167.2		94090	142374604	NM_053167.2	Trim9	NP_444397.1	ILMN_2454955	005490673	S	1888	CTACAACCCAGCTTCCCCGGGAGGTCCTACTTTGATTTCCGGTCCTCACC	12	-	71356071-71356120	12qC2	Mus musculus tripartite motif protein 9 (Trim9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]	Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	C030048G07Rik; AI835002; mKIAA0282	C030048G07Rik; AI835002; mKIAA0282
Mus musculus	RefSeq	ILMN_247458	ILMN_247458	D930001I22RIK	NM_173397.2	NM_173397.2		228859	61098158	NM_173397.2	D930001I22Rik	NP_775573.1	ILMN_2858399	007210082	S	3329	CCTTCCAAGCGTCTGTTGTCCCTTGGTGGTAAACCCCAGGCTTTGGGAGC	2	-	163157952-163158001	2qH3	Mus musculus RIKEN cDNA D930001I22 gene (D930001I22Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			AI414861	AI414861
Mus musculus	MEEBO	ILMN_210019	ILMN_210019	2610018I05RIK	scl38016.2.1_20	NM_183279.1			34304078	NM_183279.1	2610018I05Rik		ILMN_1238187	007650632	S	368	CCCCGTGAAGACCAAAGGAAGCTATTTGGGCCTGCCTCGTCAAGAAGCCC										
Mus musculus	RefSeq	ILMN_214311	ILMN_214311	DNAJC9	NM_134081.4	NM_134081.4		108671	146149284	NM_134081.4	Dnajc9	NP_598842.1	ILMN_1224989	000630445	S	1432	TATTTAAAGGACTTAAGTAACCTAGTCAGCATTGTAACAGACAGGCTGGC				14qA3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 9 (Dnajc9), mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	AU020082; 5330419I01Rik	AU020082; 5330419I01Rik
Mus musculus	RefSeq	ILMN_200548	ILMN_200548	LOC383327	XM_356985.1	XM_356985.1			38083602	XM_356985.1	LOC383327		ILMN_1238670	001770047	S	168	GTGTCATATAACTGTGAGCACTGGTTTGACCCAGACTGCTACACCAACAG										
Mus musculus	MEEBO	ILMN_214703	ILMN_214703	IGL-V1	scl0016142.1_65	XM_148393.1			20891992	XM_148393.1	Igl-V1		ILMN_1245146	005080091	S	669	GCCCAAGTGTATCCTTGGTGCTTTTGCCTACCATAGCCCTTCTCTCTACC								Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_214703	ILMN_214703	IGL-V1	scl0016142.1_65	XM_148393.1			20891992	XM_148393.1	Igl-V1		ILMN_1230696	004730180	S	496	GTACATGGCTAGCAGCTACCTGACCCTGACAGCAAGAGCATGGGAAAGGC								Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204596	ILMN_204596	CUL2	ri|1300003D18|R000010J22|AK004875|2799					AK004875	Cul2		ILMN_1247069	001470474	S	2206	CCGCATCATGAAAGCACGAAAAGTGCTTCGGCACAACGCCCTCATTCAAG						Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_212734	ILMN_212734	RCN1	NM_009037.2	NM_009037.2		19672	89179319	NM_009037.2	Rcn1	NP_033063.1	ILMN_2629701	000540131	S	1714	GTGAACAAAAACGGAATTTTAGGGATAGGAAAAAGATGGATGCTAGGTAT	2	-	105227404-105227453	2qE3	Mus musculus reticulocalbin 1 (Rcn1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Rcn	Rcn
Mus musculus	RefSeq	ILMN_217126	ILMN_217126	OLFR492	NM_146497.1	NM_146497.1		258490	33239115	NM_146497.1	Olfr492	NP_666708.1	ILMN_2679373	004250408	S	562	GTGGAACTCTCTTGTTCTGATATCAATGTTTCTGTAGTCATTACCACAAT	7	-	115466577-115466626	7qE3	Mus musculus olfactory receptor 492 (Olfr492), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR204-18	MOR204-18
Mus musculus	RefSeq	ILMN_219029	ILMN_219029	ANKZF1	NM_026187.4	NM_026187.4		52231	110556648	NM_026187.4	Ankzf1	NP_080463.3	ILMN_2703321	005310167	S	2615	CCTAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTGGAAGATGGGTGG	1	+	75195812-75195861	1qC3	Mus musculus ankyrin repeat and zinc finger domain containing 1 (Ankzf1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1300008P06Rik; 2810025E10Rik; D1Ertd161e	1300008P06Rik; 2810025E10Rik; D1Ertd161e
Mus musculus	RefSeq	ILMN_219029	ILMN_219029	ANKZF1	NM_026187.4	NM_026187.4		52231	110556648	NM_026187.4	Ankzf1	NP_080463.3	ILMN_1259463	002340750	S	2521	GCCTTCGAGACCATCGCAGTCAGGCGGGGAGACCTTCATCTTGATTTCTT	1	+	75195718-75195762:75195763-75195767	1qC3	Mus musculus ankyrin repeat and zinc finger domain containing 1 (Ankzf1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1300008P06Rik; 2810025E10Rik; D1Ertd161e	1300008P06Rik; 2810025E10Rik; D1Ertd161e
Mus musculus	MEEBO	ILMN_188025	ILMN_188025	5730559C18RIK	scl0074329.1_248				51571944	NM_028872	5730559C18Rik		ILMN_2479377	004730064	S	15	GCTGAACGAGCATCGCTGCAGAGCCTTCTGCCTACTGAACTTTTCTCCCT										
Mus musculus	MEEBO	ILMN_188025	ILMN_188025	5730559C18RIK	scl0074329.1_248				51571944	NM_028872	5730559C18Rik		ILMN_1234520	001450674	S	16	TCTAGACAAGTTGTTCCTGTTTCTCGGCTCCTCTGTCTGCTGTACTCACC										
Mus musculus	MEEBO	ILMN_189379	ILMN_189379	6330404F12RIK	scl21216.1.1627_35						6330404F12Rik		ILMN_2460754	000430678	S	11	GGTCTTGGAGAAGGTGCTGCTCCTCAGAACATGGACAAAGGATGCACAGG										
Mus musculus	RefSeq	ILMN_214405	ILMN_214405	OLFR95	NM_146513.1	NM_146513.1		258506	33238909	NM_146513.1	Olfr95	NP_666724.1	ILMN_1233741	006520435	S	621	GTGCCCCTTTGGCCTCATTCTTAGCTCCTACGGACGGATCCTGGTCACCA	17	-	37395055-37395104	17qB1	Mus musculus olfactory receptor 95 (Olfr95), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISO]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISO]	MOR263-6	MOR263-6
Mus musculus	RefSeq	ILMN_211838	ILMN_211838	SOAT2	NM_146064.1	NM_146064.1		223920	22122546	NM_146064.1	Soat2	NP_666176.1	ILMN_1227282	007040333	S	1901	GCACACCAAAGTCTGACACGTTTGGTTCTTTCTGCTTCTCCCAATGCAAC	15	+	101993642-101993691	15qF3	Mus musculus sterol O-acyltransferase 2 (Soat2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + a sterol = CoA + a sterol ester [goid 4772] [evidence IDA]	MGC36039; D15Wsu97e; ACAT2	MGC36039; D15Wsu97e; ACAT2
Mus musculus	RefSeq	ILMN_211838	ILMN_211838	SOAT2	NM_146064.1	NM_146064.1		223920	22122546	NM_146064.1	Soat2	NP_666176.1	ILMN_2811886	002490253	S	1722	ATTTGGAGTCAGGGACTTGCACATAGGACCTTCCAGGGGGCCATGGGGAC	15	+	101993463-101993512	15qF3	Mus musculus sterol O-acyltransferase 2 (Soat2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + a sterol = CoA + a sterol ester [goid 4772] [evidence IDA]	MGC36039; D15Wsu97e; ACAT2	MGC36039; D15Wsu97e; ACAT2
Mus musculus	RefSeq	ILMN_221665	ILMN_221665	ARL2BP	NM_024191.1	NM_024191.1		107566	18859590	NM_024191.1	Arl2bp	NP_077153.1	ILMN_2745036	004890327	S	1085	TCCTGCGATTACAGCTTGATTGGCTGTGGGGATCCACCGAGAGAGCTGCC	8	+	97197502-97197551	8qC5	Mus musculus ADP-ribosylation factor-like 2 binding protein (Arl2bp), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence ISO]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence ISO]	6330544B05Rik; Bart1; 1700027H16Rik; 1700010P10Rik; AI482273; AI849834	6330544B05Rik; Bart1; 1700027H16Rik; 1700010P10Rik; AI482273; AI849834
Mus musculus	RefSeq	ILMN_221665	ILMN_221665	ARL2BP	NM_024191.1	NM_024191.1		107566	18859590	NM_024191.1	Arl2bp	NP_077153.1	ILMN_2745037	003890538	S	1088	CTGCGATTACAGCTTGATTGGCTGTGGGGATCCACCGAGAGAGCTGCCCT	8	+	97197505-97197554	8qC5	Mus musculus ADP-ribosylation factor-like 2 binding protein (Arl2bp), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence ISO]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence ISO]	6330544B05Rik; Bart1; 1700027H16Rik; 1700010P10Rik; AI482273; AI849834	6330544B05Rik; Bart1; 1700027H16Rik; 1700010P10Rik; AI482273; AI849834
Mus musculus	MEEBO	ILMN_213149	ILMN_213149	3830405G04RIK	scl071440.1_256	NM_027796.1			21313349	NM_027796.1	3830405G04Rik		ILMN_2634180	007510246	S	950	GTAGATTTAATAATGTAAGTTCTTTCAGATAGTGGGTGTATACTTGTAAT										
Mus musculus	Riken	ILMN_201900	ILMN_201900	4932442I06RIK	ri|4933414I15|PX00020G20|AK016813|1338					AK016813	4932442I06Rik		ILMN_2545478	001170142	S	1248	GTCACAGACTGCATCTCACTCCCTCCGTACGGTGGAAGATGTCTCTTAAT										
Mus musculus	RefSeq	ILMN_220350	ILMN_220350	GSG2	NM_010353.1	NM_010353.1		14841	7106328	NM_010353.1	Gsg2	NP_034483.1	ILMN_1235363	006420215	S	2220	CCTGCAACATTTCCACAGGACTGTACTGAGTTTCAGCTCTGCCACGGACC	11	-	72949527-72949576	11qB4	Mus musculus germ cell-specific gene 2 (Gsg2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	MGC130563; Haspin	MGC130563; Haspin
Mus musculus	RefSeq	ILMN_254339	ILMN_254339	AAK1	NM_001040106.1	NM_001040106.1		269774	91992156	NM_001040106.1	Aak1	NP_001035195.1	ILMN_3060943	004280162	I	2069	AGTACATCCAGCAGCCCAGCAACCAGTCACTGCTCAGTTCCCTGTGGGGT				6qD1	Mus musculus AP2 associated kinase 1 (Aak1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA1048; AU067724; R75501; 5530400K14Rik; 9630042K20; C79663; MGC40785; AU067726; BC028270; D6Ertd245e	mKIAA1048; AU067724; R75501; 5530400K14Rik; 9630042K20; C79663; MGC40785; AU067726; BC028270; D6Ertd245e
Mus musculus	MEEBO	ILMN_221930	ILMN_221930	4933407L21RIK	scl17724.1_126	XM_129929.1			20855075	XM_129929.1	4933407L21Rik		ILMN_1245406	004730315	S	1020	AGACGTTACTCTTGTATGCCCTATCAGGCTTGGGTGCCACCCTTATAGCC										
Mus musculus	Riken	ILMN_206998	ILMN_206998	GTF2H2	ri|6430580E21|PX00648J18|AK078297|1066					AK078297	Gtf2h2		ILMN_1220401	000870440	S	870	GTACTGCAGAGACTAAGGCAGGAGGCTCATGAGTTTGAGGTCAACCTGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217946	ILMN_217946	6430548G04	scl19508.7.1_150				51706056	XM_488939	6430548G04		ILMN_2689624	002260296	S	3789	CTGAAGTTGCATGGCAACTGGAAAACCTGCTGAAGAGGAATGGCCAGTCC										
Mus musculus	RefSeq	ILMN_192559	ILMN_230692	ACTR1B	NM_146107.2	NM_146107.2		226977	118130225	NM_146107.2	Actr1b	NP_666219.1	ILMN_3161327	004220561	S	1640	TCAGGGTGGTGAGGCACAGTGGTGTTTGATGCTGCCTCCTCTTTCTGGCC	1	-	36756434-36756483	1qB	Mus musculus ARP1 actin-related protein 1 homolog B, centractin beta (yeast) (Actr1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI851923; AA960180; MGC36526; 2310066K23Rik; Arp1b	AI851923; AA960180; MGC36526; 2310066K23Rik; Arp1b
Mus musculus	Riken	ILMN_202478	ILMN_202478	COPG2AS2	ri|6330562F22|PX00044A17|AK018238|1208					AK018238	Copg2as2		ILMN_2549929	005360402	S	774	CAGTGATGGGAGCAGTGAGTGGAAATCAGGAAGTGATCAGACAGGGCTAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_207065	ILMN_207065	6430571H07RIK	ri|6430571H07|PX00648F06|AK078286|1116					AK078286	6430571H07Rik		ILMN_1219432	004900255	S	948	TGCTCAGTAGACCAGGCTGGCCATGAACCTGTCTTTTCCATCAGCTGGGA										
Mus musculus	RefSeq	ILMN_199286	ILMN_199286	EG270499	XM_195264.1	XM_195264.1		270499	25032836	XM_195264.1	EG270499	XP_195264.1	ILMN_1244958	000940689	S	390	CAGAGAGAACAAGGCGTGTGTTTACTTAGCTCCTGATTGTGAGGCTCCAG	7	-	33489520-33489569	7qB1	PREDICTED: Mus musculus predicted gene, EG270499 (EG270499), mRNA.					
Mus musculus	RefSeq	ILMN_189462	ILMN_256776	EG546337	XM_909284.3	XM_909284.3		546337	149271967	XM_909284.3	EG546337	XP_914377.1	ILMN_2461469	002490546	S	695	CCACTCTTCTTCCACCAATACCAAATTCCATACCACTCAGAGGCCAGGTT				XqB	PREDICTED: Mus musculus predicted gene, EG546337, transcript variant 5 (EG546337), mRNA.					
Mus musculus	RefSeq	ILMN_211927	ILMN_211927	FANCG	NM_053081.1	NM_053081.1		60534	16716362	NM_053081.1	Fancg	NP_444311.1	ILMN_1251234	006350138	S	1696	GAAAAGATTGGATCGGAAGAATGAGGCCAGTGCTTTTTGGCGGGAGGCCC	4	-	43017316-43017350:43017431-43017445	4qA5	Mus musculus Fanconi anemia, complementation group G (Fancg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Xrcc9; AU041407	Xrcc9; AU041407
Mus musculus	RefSeq	ILMN_212829	ILMN_212829	4930504E06RIK	NM_133858.3	NM_133858.3		75007	141802760	NM_133858.3	4930504E06Rik	NP_598619.2	ILMN_2630827	004280246	S	1362	CCCCGATCATCACCCAGAGCACCAATGGTCCGTGTCCTCTTCTAGCCATC	3	+	95092246-95092295	3qF2.1	Mus musculus RIKEN cDNA 4930504E06 gene (4930504E06Rik), mRNA.				mKIAA1390; cI-40; AA960384; ni; AA562754; 1810005H09Rik; AW561904	mKIAA1390; cI-40; AA960384; ni; AA562754; 1810005H09Rik; AW561904
Mus musculus	RefSeq	ILMN_212829	ILMN_212829	4930504E06RIK	NM_133858.3	NM_133858.3		75007	141802760	NM_133858.3	4930504E06Rik	NP_598619.2	ILMN_1237664	006650131	S	2690	GGGCTACCCCACAGACCCTGCCGTCTTTGTTTTAGGGTTTGGTTTGAGTT	3	+	95099978-95100027	3qF2.1	Mus musculus RIKEN cDNA 4930504E06 gene (4930504E06Rik), mRNA.				mKIAA1390; cI-40; AA960384; ni; AA562754; 1810005H09Rik; AW561904	mKIAA1390; cI-40; AA960384; ni; AA562754; 1810005H09Rik; AW561904
Mus musculus	MEEBO	ILMN_209167	ILMN_209167	LYST	scl0017101.1_301	NM_010748.1			6754591	NM_010748.1	Lyst		ILMN_1225022	004640102	S	11718	GGCGTGGAAGGCTGGGTCTGCACACACTAGCCAATTAAAGTCAGAATCTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IMP]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IMP]; Reactions triggered in response to the presence of a protozoan that act to protect the cell or organism [goid 42832] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a secretory granule in a mast cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion [goid 33364] [evidence IMP]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]			
Mus musculus	RefSeq	ILMN_213713	ILMN_213713	OPN5	NM_181753.4	NM_181753.4		353344	146198703	NM_181753.4	Opn5	NP_861418.2	ILMN_1257341	003180209	S	671	ATCGCCAAGGTGAAGTCTTCTTCTAAAGAGGTAGCCCATTTCGACAGTCG				17qB3	Mus musculus opsin 5 (Opn5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpr136; PGR12; TMEM13; Neuropsin	Gpr136; PGR12; TMEM13; Neuropsin
Mus musculus	Riken	ILMN_203958	ILMN_203958	A430077H08RIK	ri|A430077H08|PX00138O19|AK040210|934					AK040210	A430077H08Rik		ILMN_1253865	000070082	S	428	AGGTAAGGATCTGTCTCCTATCTTAGAACAGCGAGGCCCCTGCCAGACGC										
Mus musculus	Riken	ILMN_204285	ILMN_204285	SLC20A1	ri|9630015N15|PX00115N19|AK035898|1992					AK035898	Slc20a1		ILMN_2563813	007100358	S	1878	GCTTGTGACCGCCAAGTAGGTCCCGCCTCTGGTTCATGGATTGTGACCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 5315] [evidence IEA]		
Mus musculus	RefSeq	ILMN_257642	ILMN_257642	LTK	NM_008523.2	NM_008523.2		17005	45935374	NM_008523.2	Ltk	NP_032549.2	ILMN_3126724	005340259	A	2013	CAACCTGGCCTCCCACACTGGAAACTAGCCCAGACCCTCTTGGGGAAGGT	2	-	119577233-119577282	2qE5	Mus musculus leukocyte tyrosine kinase (Ltk), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222533	ILMN_222533	PCGF6	NM_027654.1	NM_027654.1		71041	28076972	NM_027654.1	Pcgf6	NP_081930.1	ILMN_1251165	000020025	S	1663	TGAGGTGCTTCTTTCTGATGGGACACTGGGTCAGGTGTCACAAAATTCCC	19	-	47087315-47087364	19qC3	Mus musculus polycomb group ring finger 6 (Pcgf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence ISA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISA]	MBLR; Rnf134; 4933407A11Rik; AI604840; MGC106622	MBLR; Rnf134; 4933407A11Rik; AI604840; MGC106622
Mus musculus	RefSeq	ILMN_218548	ILMN_218548	1300003B13RIK	NM_198003.2	NM_198003.2		74149	142371067	NM_198003.2	1300003B13Rik	NP_932120.1	ILMN_2697164	002810372	S	2397	ACAAACTTGTAAAAGTCTTCAAGTCTTAGAAGCAAGTATTTTTGCTGAGA	17	+	22593136-22593185	17qA3.3	Mus musculus RIKEN cDNA 1300003B13 gene (1300003B13Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_201815	ILMN_201815	ANXA10	ri|2210414M14|ZX00054O23|AK008930|1594					AK008930	Anxa10		ILMN_1230010	002350273	S	1381	CTGAGTTGAAACAGCTGAGAACTAAACCATTGCCAAGGAGAATGCCAGCT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212177	ILMN_212177	COLEC10	NM_173422.2	NM_173422.2		239447	142362070	NM_173422.2	Colec10	NP_775598.1	ILMN_2623644	001240367	S	4338	GTTATGCTGCTTTTAGAATATCAGGCCTTCAAACTACAGCTGAATCCTTT	15	+	54297664-54297713	15qD1	Mus musculus collectin sub-family member 10 (Colec10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence NAS]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence NAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence NAS]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence NAS]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]	CL-L1; MGC123727; MGC123951; MGC123950	CL-L1; MGC123727; MGC123951; MGC123950
Mus musculus	Riken	ILMN_203861	ILMN_203861	A630032B19RIK	ri|A630032B19|PX00144H11|AK041719|1616					AK041719	A630032B19Rik		ILMN_1259267	004120541	S	1421	GTGATGGGTGGTAGGTCCTGCTTTGGTACACTGGTTGCTCTTCAGAGGAC										
Mus musculus	MEEBO	ILMN_213325	ILMN_213325	9530064J02	scl0330631.1_241				51761845	XM_489200	9530064J02		ILMN_2636004	000830280	S	2857	CTCCCCATCTCTCAGCAAGGCATGTCTCTGACCCTAGAGAATTCATTTAC										
Mus musculus	RefSeq	ILMN_197720	ILMN_197720	LOC381492	XM_358598.1	XM_358598.1			38077576	XM_358598.1	LOC381492		ILMN_1224745	001740598	S	611	GTTTGTTGCTTGGTTCTGAGATAGGTTTCACCACCACACTCCAGCCTGCC										
Mus musculus	Riken	ILMN_204246	ILMN_204246	A830095J16RIK	ri|A830095J16|PX00156G02|AK044156|1389					AK044156	A830095J16Rik		ILMN_1235777	003390356	S	1141	TTCTTAAAGCCCACGGCCCTCTTTGGCTCTCCTCCATACTTAACACCCTC										
Mus musculus	RefSeq	ILMN_215936	ILMN_215936	NNMT	NM_010924.1	NM_010924.1		18113	6754865	NM_010924.1	Nnmt	NP_035054.1	ILMN_2665411	003370551	S	485	CTGAAGAAGGAACCAGGAGCCTTTGACTGGTCCCCAGTGGTCACCTATGT	9	-	48355343-48355392	9qA5.3	Mus musculus nicotinamide N-methyltransferase (Nnmt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + nicotinamide = S-adenosyl-L-homocysteine + 1-methylnicotinamide [goid 8112] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215936	ILMN_215936	NNMT	NM_010924.1	NM_010924.1		18113	6754865	NM_010924.1	Nnmt	NP_035054.1	ILMN_2885277	006560497	S	953	CTCCCTAGTGGGGCGAAAGCCAGGCAGATCTGAATGACATCCTGTGATCC	9	-	48343884-48343896:48343897-48343933	9qA5.3	Mus musculus nicotinamide N-methyltransferase (Nnmt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + nicotinamide = S-adenosyl-L-homocysteine + 1-methylnicotinamide [goid 8112] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219527	ILMN_219527	ARHGAP1	NM_146124.2	NM_146124.2		228359	31981891	NM_146124.2	Arhgap1	NP_666236.2	ILMN_2786160	000160528	S	2960	GGTCCTGTCAGTCTGTGGCAGGGGACGCTCTTACTGTGAATCTAGTGTTC	2	+	91473033-91473082	2qE1	Mus musculus Rho GTPase activating protein 1 (Arhgap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence ISO]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence IDA]	B230365D05Rik; p50rhoGAP; MGC7050; MGC101942; C76222	B230365D05Rik; p50rhoGAP; MGC7050; MGC101942; C76222
Mus musculus	RefSeq	ILMN_219527	ILMN_219527	ARHGAP1	NM_146124.2	NM_146124.2		228359	31981891	NM_146124.2	Arhgap1	NP_666236.2	ILMN_2786164	004860315	S	2860	CAGGCCTGGGTCCACTCTGCTTTTGCCCACATTTTTGTATCAAGTGTTGC	2	+	91472933-91472982	2qE1	Mus musculus Rho GTPase activating protein 1 (Arhgap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence ISO]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence IDA]	B230365D05Rik; p50rhoGAP; MGC7050; MGC101942; C76222	B230365D05Rik; p50rhoGAP; MGC7050; MGC101942; C76222
Mus musculus	RefSeq	ILMN_185693	ILMN_225691	ZDHHC8	NM_172151.3	NM_172151.3		27801	84619698	NM_172151.3	Zdhhc8	NP_742163.3	ILMN_2429203	001850369	S	3291	GGCCTGAGTAAGCACATGGCAGCGTCCGCTTGCATCGTGTCTGTTCTATG	16	-	18224602-18224651	16qA3	Mus musculus zinc finger, DHHC domain containing 8 (Zdhhc8), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC103030; E330009O14Rik; MGC7847; MGC118171; D16H22S1738E; ZDHHCL1	MGC103030; E330009O14Rik; MGC7847; MGC118171; D16H22S1738E; ZDHHCL1
Mus musculus	RefSeq	ILMN_200023	ILMN_225691	ZDHHC8	NM_172151.3	NM_172151.3		27801	84619698	NM_172151.3	Zdhhc8	NP_742163.3	ILMN_1239490	000580474	S	988	AATGGGCTGAAAGCTGGCCGCAGCAAGTCCAAGGGCAGTCTAGACCAGCT	16	-	18228451-18228468:18228407-18228438	16qA3	Mus musculus zinc finger, DHHC domain containing 8 (Zdhhc8), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC103030; E330009O14Rik; MGC7847; MGC118171; D16H22S1738E; ZDHHCL1	MGC103030; E330009O14Rik; MGC7847; MGC118171; D16H22S1738E; ZDHHCL1
Mus musculus	RefSeq	ILMN_196108	ILMN_241005	2210018M11RIK	NM_172280.2	NM_172280.2		233545	124249083	NM_172280.2	2210018M11Rik	NP_758484.2	ILMN_2521686	005550372	S	3167	CTCCGAACCAACCAAAAATCTACGTGCAACCCCAAACTCCTCAGAGCCAG	7	-	105743300-105743349	7qE2	Mus musculus RIKEN cDNA 2210018M11 gene (2210018M11Rik), mRNA. XM_897432 XM_897454 XM_897463 XM_897475 XM_919189 XM_919240 XM_919255 XM_919276 XM_919295 XM_919307 XM_974468 XM_974623 XM_988525	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		MGC101920; Emsy; AU019557; AU019521; 2310016L09Rik	MGC101920; Emsy; AU019557; AU019521; 2310016L09Rik
Mus musculus	RefSeq	ILMN_187836	ILMN_241005	2210018M11RIK	NM_172280.2	NM_172280.2		233545	124249083	NM_172280.2	2210018M11Rik	NP_758484.2	ILMN_2447538	001500730	S	3939	CGCCGGAGTGCACTTTAGAGCCTGCGTGGTTACCAAATGTCCAGGGAAAC	7	-	105739141-105739190	7qE2	Mus musculus RIKEN cDNA 2210018M11 gene (2210018M11Rik), mRNA. XM_897432 XM_897454 XM_897463 XM_897475 XM_919189 XM_919240 XM_919255 XM_919276 XM_919295 XM_919307 XM_974468 XM_974623 XM_988525	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		MGC101920; Emsy; AU019557; AU019521; 2310016L09Rik	MGC101920; Emsy; AU019557; AU019521; 2310016L09Rik
Mus musculus	MEEBO	ILMN_222035	ILMN_222035	PRKCB	scl018751.17_49	NM_008855.1			6679344	NM_008855.1	Prkcb		ILMN_1229458	001050224	S	2116	CAGCTGTCATGGTGACATTTTTTCTTTTTCATTGCCGAGTTACATCCGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IDA];  [goid 5246] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221161	ILMN_196604	EAR2	NM_007895.2	NM_007895.2		13587	34328111	NM_007895.2	Ear2	NP_031921.1	ILMN_2731735	004070148	S	639	GTCCTCGTGAAACCTGTCACTTACTCCCTTTAATTTTGCTGAATAGATCT	14	+	44681119-44681168	14qC1	Mus musculus eosinophil-associated, ribonuclease A family, member 2 (Ear2), mRNA.		The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	Rnase2; EAR-13	Rnase2; EAR-13
Mus musculus	RefSeq	ILMN_196604	ILMN_196604	EAR2	NM_007895.2	NM_007895.2		13587	34328111	NM_007895.2	Ear2	NP_031921.1	ILMN_1232396	003130681	S	38	AGTTCCACGGGAGCCACAAAGCAGACAGGGAAACATGGGTCCGAAGCTGC	14	+	44680356-44680384:44680547-44680551:44680552-44680567	14qC1	Mus musculus eosinophil-associated, ribonuclease A family, member 2 (Ear2), mRNA.		The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	Rnase2; EAR-13	Rnase2; EAR-13
Mus musculus	RefSeq	ILMN_196604	ILMN_196604	EAR2	NM_007895.2	NM_007895.2		13587	34328111	NM_007895.2	Ear2	NP_031921.1	ILMN_2925653	005870605	S	613	CTCTGTCTGCGCTCCATATAGCACATGTCCTCGTGAAACCTGTCACTTAC	14	+	44681093-44681142	14qC1	Mus musculus eosinophil-associated, ribonuclease A family, member 2 (Ear2), mRNA.		The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	Rnase2; EAR-13	Rnase2; EAR-13
Mus musculus	RefSeq	ILMN_196604	ILMN_196604	EAR2	NM_007895.2	NM_007895.2		13587	34328111	NM_007895.2	Ear2	NP_031921.1	ILMN_2524992	002810379	S	1	ACACATTTATCCCTGATTTCCAGGACAACCAGCCCTAAGTTCCACGGGAG	14	+	44680319-44680368	14qC1	Mus musculus eosinophil-associated, ribonuclease A family, member 2 (Ear2), mRNA.		The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	Rnase2; EAR-13	Rnase2; EAR-13
Mus musculus	MEEBO	ILMN_214251	ILMN_214251	PARK2	scl0001606.1_1	NM_016694.2			34328227	NM_016694.2	Park2		ILMN_2773073	002140164	S	1614	CAGGCTGCAGATTACAGAAGCAGCCCCTAGATCCTTTCCAGGGCACCCAC						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42415] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IMP]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The directed movement of dopamine into a cell, typically presynaptic neurons or glial cells. Dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 51583] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215787	ILMN_215787	CD99L2	NM_138309.2	NM_138309.2		171486	118129961	NM_138309.2	Cd99l2	NP_612182.1	ILMN_1230457	001410521	S	2070	GCTGGGAAGAGGCAACACTCACCTTAAGAAACTCCCTAACTCTTGTGCTG	X	-	68675225-68675274	XqA7.2	Mus musculus CD99 antigen-like 2 (Cd99l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Mic2l1; AW548191; Xap89	Mic2l1; AW548191; Xap89
Mus musculus	RefSeq	ILMN_210587	ILMN_329385	LOC100044210	XM_001471732.1	XM_001471732.1		100044210	149251762	XM_001471732.1	LOC100044210	XP_001471782.1	ILMN_1214947	004830154	S	1914	CAGATGAAGTGCAGGTCTACCACAGTAGTAGGTCAGAGTGGGAAGAGGTG					PREDICTED: Mus musculus hypothetical protein LOC100044210 (LOC100044210), mRNA.					
Mus musculus	Riken	ILMN_205435	ILMN_205435	E330029N20RIK	ri|E330029N20|PX00212F11|AK054478|2278					AK054478	E330029N20Rik		ILMN_1234037	006450068	S	1881	CTGCCAGGACTCATGCTGTTGCTGCTTGTTCAGTGGAGTCTGTCTTCTGA										
Mus musculus	RefSeq	ILMN_200682	ILMN_200682	LOC383445	XM_357064.1	XM_357064.1			38085114	XM_357064.1	LOC383445		ILMN_2539628	005860050	S	354	CGTTAGCGGTCCACTGTGGCCTAGAGTGGTGTCAGCTATGGGAAGAATGC										
Mus musculus	MEEBO	ILMN_195871	ILMN_195871	4932439E07RIK	scl37828.1.1_32						4932439E07Rik		ILMN_1237703	000270603	S	5	GGGGGGTTACAGATCTTCTTTGTCTTGTCTAGAGCTGCTCCTCTTTGTGC										
Mus musculus	RefSeq	ILMN_222945	ILMN_222945	OLFR33	NM_147073.1	NM_147073.1		18332	22165411	NM_147073.1	Olfr33	NP_667284.1	ILMN_2757105	001400201	S	21	GTCAATATCACCTTCTTCCAGCCACAATCTTTCCTGATGACTGGCATACC	7	-	109862855-109862904	7qE3	Mus musculus olfactory receptor 33 (Olfr33), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR11-2; MTPCR33; ORL181; MGC123818; MGC123819	MOR11-2; MTPCR33; ORL181; MGC123818; MGC123819
Mus musculus	RefSeq	ILMN_222945	ILMN_222945	OLFR33	NM_147073.1	NM_147073.1		18332	22165411	NM_147073.1	Olfr33	NP_667284.1	ILMN_2830783	002490563	S	609	CCTATATGGACTCTATGTGGTTCTGTCCACAGTGGGTATAGACTCCTTGC	7	-	109862267-109862316	7qE3	Mus musculus olfactory receptor 33 (Olfr33), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR11-2; MTPCR33; ORL181; MGC123818; MGC123819	MOR11-2; MTPCR33; ORL181; MGC123818; MGC123819
Mus musculus	RefSeq	ILMN_213661	ILMN_213661	KLRB1C	NM_008527.1	NM_008527.1		17059	6678745	NM_008527.1	Klrb1c	NP_032553.1	ILMN_2952650	006100184	S	2451	GACATCAGAGCAGGCATGGTTTCTGGGGGGCAAAGTAGCGTTAATCAGGG	6	-	128728564-128728613	6qF3	Mus musculus killer cell lectin-like receptor subfamily B member 1C (Klrb1c), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity [goid 45954] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	NKR-P1C; Nk-1; NKR-P1; CD161; NK-1.1; AI462337; NKR-P1 40; Ly-59; Ly55c; Ly59; NK1.1; Nkrp1-c; Nk1; Nkrp1c; NK-RP1; Nk-1.2	NKR-P1C; Nk-1; NKR-P1; CD161; NK-1.1; AI462337; NKR-P1 40; Ly-59; Ly55c; Ly59; NK1.1; Nkrp1-c; Nk1; Nkrp1c; NK-RP1; Nk-1.2
Mus musculus	RefSeq	ILMN_222138	ILMN_222138	TAF7L	NM_028958.3	NM_028958.3		74469	118130557	NM_028958.3	Taf7l	NP_083234.1	ILMN_1245915	006860048	S	1497	CTATGGTACCATGAGATCATTCAGCCGTCCTTGTCAAAGGTTTAGGCTAG	X	-	130994847-130994896	XqE3	Mus musculus TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf7l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [evidence IEA]	50kDa; Taf2q; MGC124181; 4933438I11Rik	50kDa; Taf2q; MGC124181; 4933438I11Rik
Mus musculus	RefSeq	ILMN_211682	ILMN_211682	EIF4A1	NM_144958.3	NM_144958.3		13681	142366509	NM_144958.3	Eif4a1	NP_659207.1	ILMN_2618481	004920180	S	1188	AACACCTCCATTGAAGAGATGCCCCTCAACGTTGCTGACCTCATTTGAGG	11	-	69480972-69480974:69480975-69481021	11qB3	Mus musculus eukaryotic translation initiation factor 4A1 (Eif4a1), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	Eif4; Ddx2a; BM-010	Eif4; Ddx2a; BM-010
Mus musculus	MEEBO	ILMN_224188	ILMN_224188	A730042J05RIK	scl35084.16.1_17				31341242	NM_178708	A730042J05Rik		ILMN_2776271	005220725	S	1996	CCGGGAAGGAGACAGCTGGGCTTCGGTTTGTTTATGGAGGCTACCTTTGT										
Mus musculus	RefSeq	ILMN_187349	ILMN_322786	LOC100047674	XM_001478657.1	XM_001478657.1		100047674	149252707	XM_001478657.1	LOC100047674	XP_001478707.1	ILMN_2704855	004890100	S	2817	CCAGCACATTGTTAACCACATGGACAGATAGAGGGGGCAGAGCCTGGAAC					PREDICTED: Mus musculus similar to solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 (LOC100047674), mRNA.					
Mus musculus	RefSeq	ILMN_187349	ILMN_322786	LOC100047674	XM_001478657.1	XM_001478657.1		100047674	149252707	XM_001478657.1	LOC100047674	XP_001478707.1	ILMN_1217418	006330452	S	3800	GCTGACGAGCGACCTTTGCCTACAGGTGTTCGCCTCTCACACGTCTTTTC					PREDICTED: Mus musculus similar to solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 (LOC100047674), mRNA.					
Mus musculus	RefSeq	ILMN_197425	ILMN_250331	EG620119	XM_907340.2	XM_907340.2		620119	94396683	XM_907340.2	EG620119	XP_912433.1	ILMN_2528091	004390026	S	339	TCCAGAGTGCAGCTATTGGTGCTTTGCAGGAGGCAAGTGAGGCCTACCAG				14qA3	PREDICTED: Mus musculus predicted gene, EG620119 (EG620119), mRNA.					
Mus musculus	MEEBO	ILMN_195159	ILMN_195159	SNX19	scl37167.10_205				39930454	NM_028874	Snx19		ILMN_2691536	001400343	S	2889	TTCTTCGGGAATCTATCTGGCCTGGTGGAGTGCTGCCCAAGTTTCCACGG										
Mus musculus	MEEBO	ILMN_195159	ILMN_195159	SNX19	scl37167.10_205				39930454	NM_028874	Snx19		ILMN_1256066	006420286	S	2890	TCTTCGGGAATCTATCTGGCCTGGTGGAGTGCTGCCCAAGTTTCCACGGC										
Mus musculus	RefSeq	ILMN_191512	ILMN_246529	PILRA	NM_153510.2	NM_153510.2		231805	141803285	NM_153510.2	Pilra	NP_705730.1	ILMN_2665307	005910482	S	823	CCAAAGAAAACCCCAAGGATAATAACATCGTGTATGCTTCCATCTCCCTC	5	-	138276721-138276770	5qG2	Mus musculus paired immunoglobin-like type 2 receptor alpha (Pilra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AV021745; FDF03	AV021745; FDF03
Mus musculus	RefSeq	ILMN_222500	ILMN_222500	FOS	NM_010234.2	NM_010234.2		14281	31560587	NM_010234.2	Fos	NP_034364.1	ILMN_2750515	000510368	S	1825	GTCCTTCAGCGTCAATGTTCATTGTCATGTTACTGATCATGCATTGTCGA	12	+	86817951-86818000	12qD2	Mus musculus FBJ osteosarcoma oncogene (Fos), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	c-fos; D12Rfj1	c-fos; D12Rfj1
Mus musculus	RefSeq	ILMN_209404	ILMN_209404	ATG4B	NM_174874.3	NM_174874.3		66615	146198771	NM_174874.3	Atg4b	NP_777363.1	ILMN_1240472	003520288	S	2744	GGGGTGGACATATGGAACACTACAACCTGAGGGAACTCTCAGGGCTTGAG				1qD	Mus musculus autophagy-related 4B (yeast) (Atg4b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; Any multimeric complex connected to a microtubule [goid 5875] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [evidence ISS]; The process of directing proteins towards the vacuole using signals contained within the protein [goid 6623] [evidence ISS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISS]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISS]	Apg4b; Autl1; Atg4bl; 2510009N07Rik	Apg4b; Autl1; Atg4bl; 2510009N07Rik
Mus musculus	RefSeq	ILMN_221215	ILMN_221215	LYRM2	NM_175364.3	NM_175364.3		108755	141801833	NM_175364.3	Lyrm2	NP_780573.1	ILMN_2732585	004540242	S	1074	CTCGCGGAGCTTTAGTGGAAATAGCTAAGAACACCAAGAAGAGGGAGCAC	4	+	32888979-32889028	4qA5	Mus musculus LYR motif containing 2 (Lyrm2), mRNA.				2610208E05Rik; RP23-301P13.1	2610208E05Rik; RP23-301P13.1
Mus musculus	RefSeq	ILMN_221215	ILMN_221215	LYRM2	NM_175364.3	NM_175364.3		108755	141801833	NM_175364.3	Lyrm2	NP_780573.1	ILMN_2739340	006370187	S	570	CCTCATGAAGACTCTTGCTGCCAAGGACAGAAGTTTGGTCCCTGTGACAC	4	+	32888475-32888524	4qA5	Mus musculus LYR motif containing 2 (Lyrm2), mRNA.				2610208E05Rik; RP23-301P13.1	2610208E05Rik; RP23-301P13.1
Mus musculus	RefSeq	ILMN_215181	ILMN_215181	ADCK1	NM_028105.3	NM_028105.3		72113	118130450	NM_028105.3	Adck1	NP_082381.1	ILMN_2656440	001780332	S	1810	CTTCACGCTGGGACGACCCACTGACCCATGGCTGCCTAGGGTTGGCTGTG	12	+	89699685-89699734	12qD3	Mus musculus aarF domain containing kinase 1 (Adck1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2610005A10Rik	2610005A10Rik
Mus musculus	Riken	ILMN_206179	ILMN_206179	MMP28	ri|E330009J09|PX00211N12|AK087705|1455					AK087705	Mmp28		ILMN_1233866	004560215	S	1138	GAGGAGGCAACGCTCCCCTTTCACATATAAGGATTCGCTTGTCTCTCTGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISO]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_209960	ILMN_209960	1700026J04RIK	scl071864.2_139	XM_127285.2			38074400	XM_127285.2	1700026J04Rik		ILMN_2600839	004200180	S	1887	CTATTCCACAAAACCCAGCTAAAATATGGTTCATCATTGAGACACAGGTA										
Mus musculus	RefSeq	ILMN_221607	ILMN_221607	RNF122	NM_175136.2	NM_175136.2		68867	118129848	NM_175136.2	Rnf122	NP_780345.1	ILMN_2737725	000360600	S	3475	GAAGTACTGTGTGGAAGCCAGGAACAGGATTGGATAGAGTAAGCACCCTG	8	+	32241873-32241922	8qA3	Mus musculus ring finger protein 122 (Rnf122), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110063C11Rik	1110063C11Rik
Mus musculus	RefSeq	ILMN_260715	ILMN_260715	MAGEA4	NM_020280.1	NM_020280.1		17140	9937975	NM_020280.1	Magea4	NP_064676.1	ILMN_2930242	007550131	S	864	CACTGAAAAATATGCAGAGGCTTTGAGAGATGAGACAGAGAGGGCCCAGG	X	+	69465680-69465729	XqA7.3	Mus musculus melanoma antigen, family A, 4 (Magea4), mRNA.				MGC123682; Mage-a4; MGC123681	MGC123682; Mage-a4; MGC123681
Mus musculus	MEEBO	ILMN_224182	ILMN_224182	OLFR985	scl6608.1.1_231				22129158	NM_146855	Olfr985		ILMN_2776112	000580220	S	778	CTGAAACCCGCTTCTAATGGTTCCGTCATCCACGAAAAAGTGACCTCAGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218439	ILMN_218439	RAN	NM_009391.3	NM_009391.3		19384	114431265	NM_009391.3	Ran	NP_033417.1	ILMN_2721231	002360239	S	2215	GTGTTTAACCAGAGTGCAGAGATTTACATTATTTATTGGAAGAACTTAAA	5	+	129530123-129530172	5qG1.3	Mus musculus RAN, member RAS oncogene family (Ran), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218439	ILMN_218439	RAN	NM_009391.3	NM_009391.3		19384	114431265	NM_009391.3	Ran	NP_033417.1	ILMN_2934457	001050097	S	1706	CGGGGTTTATATAGGTTGTGCAGGAGAGGAAATGCTAGGGCTACTGCCAC	5	+	129529614-129529663	5qG1.3	Mus musculus RAN, member RAS oncogene family (Ran), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_207483	ILMN_218439	RAN	NM_009391.3	NM_009391.3		19384	114431265	NM_009391.3	Ran	NP_033417.1	ILMN_1260567	005670086	I	98	CCGACTGGAGCTGGAAAGATGGCGGAAGCGCGATTCAAATGCCGGAGACG	5	+	129526128-129526153:129526403-129526413:129526414-129526426	5qG1.3	Mus musculus RAN, member RAS oncogene family (Ran), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_201886	ILMN_201886	4931419E09RIK	ri|4931419E09|PX00016I04|AK016463|1528					AK016463	4931419E09Rik		ILMN_1259164	003370358	S	583	GTAGCGCACTATGGATGTAAAGGGAGCCGGTCAAAATGGTTGGCAGCAGC										
Mus musculus	RefSeq	ILMN_242000	ILMN_242000	ARAP1	NM_001040111.1	NM_001040111.1		69710	92091594	NM_001040111.1	Arap1	NP_001035200.1	ILMN_3069785	000450050	I	498	GAAGCGACACATCTTCCGTTCACCACCTGTGCCCGTCACTCCACCAGAGC	7	+	108521758-108521807	7qE3	Mus musculus ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 (Arap1), transcript variant 3, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2410002L19Rik; mKIAA0782	2410002L19Rik; mKIAA0782
Mus musculus	Riken	ILMN_201744	ILMN_201744	2610511G22RIK	ri|2610511G22|ZX00045N09|AK012112|743					AK012112	2610511G22Rik		ILMN_2544244	004850471	S	469	CGCTTTTCCAGCCTTCAGGACCACGGTGGAGAATTCTGGACCTCTCCCCT										
Mus musculus	RefSeq	ILMN_225026	ILMN_225026	PNPLA6	NM_015801.1	NM_015801.1		50767	7657400	NM_015801.1	Pnpla6	NP_056616.1	ILMN_2855515	006250414	S	4314	TTGGCTCCAAGGACCACACACTGGACTGACTTGCCCTGTCCCTAAGGGGA	8	+	3544143-3544192	8qA1.1	Mus musculus patatin-like phospholipase domain containing 6 (Pnpla6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline. They are important constituents of cell membranes [goid 46470] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence ISS]	AI661849; MSws; Nte	AI661849; MSws; Nte
Mus musculus	MEEBO	ILMN_214863	ILMN_214863	PRP2	scl0083380.1_28	NM_031499.1			13928675	NM_031499.1	Prp2		ILMN_1218867	006650286	S	40	GCTCTGCTCAGGGACCCCGTGAAGAACTTCAGAATCAAATCCAGATCCCG										
Mus musculus	Riken	ILMN_204944	ILMN_204944	D230048N11RIK	ri|D230048N11|PX00190M21|AK052125|2623					AK052125	D230048N11Rik		ILMN_1259028	004640167	S	1853	GGTCCTGGGAACCACACTCAGTCCCTCTGTCTCGTAAGAGCAGTATGTAC										
Mus musculus	MEEBO	ILMN_194948	ILMN_194948	5730530J16RIK	scl0070642.1_321						5730530J16Rik		ILMN_1249981	003120553	S	18	TGATCATTGTTCTTTTTAAAAGTTTTATTTCACTGTTATTTCAATAAAAA										
Mus musculus	RefSeq	ILMN_201019	ILMN_316540	LOC100042351	XM_001477266.1	XM_001477266.1		100042351	149273285	XM_001477266.1	LOC100042351	XP_001477316.1	ILMN_1243580	003460113	S	780	GCCTGTCACCCATAGGAAGGCCATCATTCTAGGTCAACTGCCAACAAGCC	Y|NT_166353.1	+	147572-147621		PREDICTED: Mus musculus similar to putative, transcript variant 1 (LOC100042351), mRNA.					
Mus musculus	RefSeq	ILMN_212241	ILMN_212241	TLCD1	NM_026708.1	NM_026708.1		68385	21539616	NM_026708.1	Tlcd1	NP_080984.1	ILMN_2781458	004280471	S	1210	GTCCTTTGAGCCTGTGATGGAGCAGTGTCCCAGGAGAACCAACACCTGTC	11	+	77994201-77994250	11qB5	Mus musculus TLC domain containing 1 (Tlcd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA690150; AU015616; 0610030G03Rik; RP23-185A18.3; 0610007A15Rik	AA690150; AU015616; 0610030G03Rik; RP23-185A18.3; 0610007A15Rik
Mus musculus	RefSeq	ILMN_188897	ILMN_312578	KCNB2	XM_001473596.1	XM_001473596.1		98741	149233659	XM_001473596.1	Kcnb2	XP_001473646.1	ILMN_2456651	007550273	S	5184	GCAAATGGCGTCAAACTCAGAGGAGAACATGTAAGTCTGGAAAGACCTGG				1qA3	PREDICTED: Mus musculus potassium voltage gated channel, Shab-related subfamily, member 2 (Kcnb2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188897	ILMN_312578	KCNB2	XM_001473596.1	XM_001473596.1		98741	149233659	XM_001473596.1	Kcnb2	XP_001473646.1	ILMN_2523970	002900463	S	2475	CAGCCCCAACTGCCTAGCAGATAAGCCTGGCGATGCCAGAGACTCTTTAA				1qA3	PREDICTED: Mus musculus potassium voltage gated channel, Shab-related subfamily, member 2 (Kcnb2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190148	ILMN_238688	DUSP16	NM_001048054.1	NM_001048054.1		70686	114205413	NM_001048054.1	Dusp16	NP_001041519.1	ILMN_2467596	007160397	S	3931	GGATGGTACAAAATGGACTCTGTGAGAAATGCTGGAAACCGTTCAGGCCG	6	-	134665651-134665700	6qG1	Mus musculus dual specificity phosphatase 16 (Dusp16), transcript variant B1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IDA]	Mkpm; D6Ertd213e; MKP-7; MKP7; AW558566; 3830417M17Rik	Mkpm; D6Ertd213e; MKP-7; MKP7; AW558566; 3830417M17Rik
Mus musculus	RefSeq	ILMN_190148	ILMN_238688	DUSP16	NM_001048054.1	NM_001048054.1		70686	114205413	NM_001048054.1	Dusp16	NP_001041519.1	ILMN_2754148	006220279	S	3815	GTATCAGTTCTTGGAATCACGACTACCATGCTGAAAGGGCTGCCTCTGAG	6	-	134665767-134665816	6qG1	Mus musculus dual specificity phosphatase 16 (Dusp16), transcript variant B1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IDA]	Mkpm; D6Ertd213e; MKP-7; MKP7; AW558566; 3830417M17Rik	Mkpm; D6Ertd213e; MKP-7; MKP7; AW558566; 3830417M17Rik
Mus musculus	Riken	ILMN_201869	ILMN_201869	1300003O07RIK	ri|4633401I16|PX00013B11|AK014613|1435					AK014613	1300003O07Rik		ILMN_1242074	001300356	S	1272	TAGACCAGGCTAGCCTCAAGTCACAGAGATCTTGCTGCCTCTGCCTCGCT										
Mus musculus	RefSeq	ILMN_219080	ILMN_259139	PAIP2B	NM_146169.1	NM_146169.1		232164	22165389	NM_146169.1	Paip2b	NP_666281.2	ILMN_2704015	001820397	S	3187	GCTTCATTAAGATTGTAAGGTTAACCATGGCTTAAAAATAAATGGTTTTG	6	-	83756063-83756112	6qC3	Mus musculus poly(A) binding protein interacting protein 2B (Paip2b), mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence ISO]	Antagonizes the ribosome-mediated translation of mRNA into a polypeptide via direct binding to nucleic acid [goid 900] [evidence ISO]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence ISO]	MGC27648; MGC49717	MGC27648; MGC49717
Mus musculus	RefSeq	ILMN_219080	ILMN_259139	PAIP2B	NM_146169.1	NM_146169.1		232164	22165389	NM_146169.1	Paip2b	NP_666281.2	ILMN_1236391	003310402	S	1746	TGTGGTGAATGACAGGTCTGGAAAGATCATGCTGCTTCCAGCAGTCCATC	6	-	83757504-83757553	6qC3	Mus musculus poly(A) binding protein interacting protein 2B (Paip2b), mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence ISO]	Antagonizes the ribosome-mediated translation of mRNA into a polypeptide via direct binding to nucleic acid [goid 900] [evidence ISO]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence ISO]	MGC27648; MGC49717	MGC27648; MGC49717
Mus musculus	RefSeq	ILMN_259139	ILMN_259139	PAIP2B	NM_146169.1	NM_146169.1		232164	22165389	NM_146169.1	Paip2b	NP_666281.2	ILMN_3005212	006350719	S	3110	ACACCAAGCTGTACTCCAGGCCCGTGAAAGGTTGAGACTGGGTTAGCACT	6	-	83756140-83756189	6qC3	Mus musculus poly(A) binding protein interacting protein 2B (Paip2b), mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence ISO]	Antagonizes the ribosome-mediated translation of mRNA into a polypeptide via direct binding to nucleic acid [goid 900] [evidence ISO]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence ISO]	MGC27648; MGC49717	MGC27648; MGC49717
Mus musculus	RefSeq	ILMN_201025	ILMN_201025	LOC385575	XM_358291.1	XM_358291.1			38088001	XM_358291.1	LOC385575		ILMN_1250887	004180408	S	200	GGCGCCAAATTGCTTTCAAATCCAGAGGCTCCTCTCAACCTCAGAAGAGC										
Mus musculus	RefSeq	ILMN_216465	ILMN_216465	MAEL	NM_175296.4	NM_175296.4		98558	118129866	NM_175296.4	Mael	NP_780505.1	ILMN_2671385	006940270	S	1472	AATGTCACTCCTAAAACCTACTTAATTTGTAAGGAAACTATTTCATAGAT	1	-	168131540-168131589	1qH2.3	Mus musculus maelstrom homolog (Drosophila) (Mael), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1741] [evidence IDA]; A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182) [goid 33391] [evidence IDA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IDA]; Any chromosome other than a sex chromosome [goid 30849] [evidence IDA]; The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males [goid 805] [evidence IDA]; The sex chromosome present in males of species in which the male is the heterogametic sex; generally, the sex chromosome that pairs with the X chromosome in the heterogametic sex. The Y chromosome is absent from the cells of females and present in one copy in the somatic cells of males [goid 806] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU019877; 4933405K18Rik	AU019877; 4933405K18Rik
Mus musculus	RefSeq	ILMN_209424	ILMN_214377	ARMC9	NM_030184.2	NM_030184.2		78795	119637816	NM_030184.2	Armc9	NP_084460.1	ILMN_2695415	005570181	S	4613	CAGAGGAGTTCAGAGCCAGCACTGCTGTCCAGTCACAGACACATCCATAC	1	+	88174315-88174364	1qC5	Mus musculus armadillo repeat containing 9 (Armc9), transcript variant 1, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930438O05Rik; 5730415N24Rik; 3830422A13Rik; 4831423D23Rik	4930438O05Rik; 5730415N24Rik; 3830422A13Rik; 4831423D23Rik
Mus musculus	MEEBO	ILMN_194113	ILMN_194113	PGM5	scl52629.12_611				33238873	NM_175013	Pgm5		ILMN_2729608	006420274	S	776	GCACGGCCGTTCAGTGCTAGATAACACCATGCAACAGCCACAGCTTTTCA						A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence ISO]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IDA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence ISO]		
Mus musculus	MEEBO	ILMN_213430	ILMN_213430	C630011I23	scl0214470.3_49	NM_177608.2			31341207	NM_177608.2	C630011I23		ILMN_2636990	000620543	S	1572	CGAGCCAAGAGTCAGAAGAAAAAAGCGTTAGCTGCAGCCCTTGCTACAGC										
Mus musculus	RefSeq	ILMN_221211	ILMN_221211	RDH7	NM_017473.3	NM_017473.3		54150	146134420	NM_017473.3	Rdh7	NP_059501.1	ILMN_1226515	006060605	S	1010	CTGGAGCTCTGTAAAGCCTGCCCAAGCCCTGTGAATCTGCACGTGTGTGC				10qD3	Mus musculus retinol dehydrogenase 7 (Rdh7), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IEA]	CRAD2; AI194929	CRAD2; AI194929
Mus musculus	RefSeq	ILMN_209780	ILMN_320773	LOC100044159	XM_001471713.1	XM_001471713.1		100044159	149262646	XM_001471713.1	LOC100044159	XP_001471763.1	ILMN_2599145	000520201	S	845	AGCAGAAGAGTTGGAACTGCCCACTCCCAAGGCCAGACGGCTGCATGGGA					PREDICTED: Mus musculus hypothetical protein LOC100044159 (LOC100044159), mRNA.					
Mus musculus	RefSeq	ILMN_220975	ILMN_234792	SPOPL	NM_029773.1	NM_029773.1		76857	63079700	NM_029773.1	Spopl	NP_084049.1	ILMN_2729354	001450215	S	1597	TGGTTTATACTTCAGCTTTAAATCTGACTGATTGATTCACTTCAAGGCCT	2	-	23366638-23366687	2qA3	Mus musculus speckle-type POZ protein-like (Spopl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BB233739; E430033K04Rik; AU014935; MGC130583	BB233739; E430033K04Rik; AU014935; MGC130583
Mus musculus	MEEBO	ILMN_196054	ILMN_196054	4930540L03RIK	scl24471.8.1_182				21312845	NM_026293	4930540L03Rik		ILMN_2596249	005720021	S	830	TTGGGCGGCAGTGAAATCCTTCTGGGGGTCAAAAACTTCAGCAACTGAGA										
Mus musculus	MEEBO	ILMN_196054	ILMN_196054	4930540L03RIK	scl24471.8.1_182				21312845	NM_026293	4930540L03Rik		ILMN_1239790	004860674	S	19	TGCTTTCAAATCAATCAAGTGGATCTTACATTTGTATCATGTGTTTTAAA										
Mus musculus	RefSeq	ILMN_221549	ILMN_221549	CDH11	NM_009866.4	NM_009866.4		12552	114687887	NM_009866.4	Cdh11	NP_033996.4	ILMN_2751663	002970551	S	3644	TATTTTATGAACATTGTACTGTTGCTTTAATATGAGCTTCAATATAAGAA	8	-	105157417-105157466	8qD2	Mus musculus cadherin 11 (Cdh11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cad11; MGC25339	Cad11; MGC25339
Mus musculus	RefSeq	ILMN_221549	ILMN_221549	CDH11	NM_009866.4	NM_009866.4		12552	114687887	NM_009866.4	Cdh11	NP_033996.4	ILMN_1240529	005420026	S	271	TGACCAATCAGATGGGTGGAGCATGTTATAGGAATTGGCAGCAGGTATCC	8	-	105244326-105244375	8qD2	Mus musculus cadherin 11 (Cdh11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cad11; MGC25339	Cad11; MGC25339
Mus musculus	RefSeq	ILMN_194771	ILMN_232946	NSMCE4A	XM_917462.3	XM_917462.3		67872	149258121	XM_917462.3	Nsmce4a	XP_922555.1	ILMN_2674838	007320278	S	1341	AAGATGAAGATTTGTTTTTGGTAAAATGTAGCTTTTGATAGTTATTGGAT				7qF3	PREDICTED: Mus musculus non-SMC element 4 homolog A (S. cerevisiae), transcript variant 5 (Nsmce4a), mRNA.					
Mus musculus	RefSeq	ILMN_194771	ILMN_232946	NSMCE4A	XM_917462.3	XM_917462.3		67872	149258121	XM_917462.3	Nsmce4a	XP_922555.1	ILMN_2509457	003390278	S	1107	AGTGAGGGAATTGACCACAACATTCAAATTAGGAGTCAAGGAATTATAGC				7qF3	PREDICTED: Mus musculus non-SMC element 4 homolog A (S. cerevisiae), transcript variant 5 (Nsmce4a), mRNA.					
Mus musculus	RefSeq	ILMN_209311	ILMN_209311	OLFR2	NM_010983.1	NM_010983.1		18317	7242164	NM_010983.1	Olfr2	NP_035113.1	ILMN_2594611	001940064	S	462	GGCTGGAGGTTTTGGTATCTCCATGGTTAAAGTTTTCCTCATTTCTCGCC	7	-	114144861-114144910	7qE3	Mus musculus olfactory receptor 2 (Olfr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	I7; MOR103-15; I54; Olfr41	I7; MOR103-15; I54; Olfr41
Mus musculus	RefSeq	ILMN_209311	ILMN_209311	OLFR2	NM_010983.1	NM_010983.1		18317	7242164	NM_010983.1	Olfr2	NP_035113.1	ILMN_2880140	007320148	S	691	ATGCGCATCCCCTCAGCTGCTGGCCGCCATAAGGCCTTTTCAACCTGTGC	7	-	114144632-114144681	7qE3	Mus musculus olfactory receptor 2 (Olfr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	I7; MOR103-15; I54; Olfr41	I7; MOR103-15; I54; Olfr41
Mus musculus	RefSeq	ILMN_222489	ILMN_222489	MEA1	NM_010787.1	NM_010787.1		17256	6754673	NM_010787.1	Mea1	NP_034917.1	ILMN_2750258	005960136	S	381	TTGGAGAGTGAGGATGAAGATGAGGAGGGAGCCGCCGCATTGAGCAGCCA	17	+	46818988-46819037	17qC	Mus musculus male enhanced antigen 1 (Mea1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Mea-1	Mea-1
Mus musculus	MEEBO	ILMN_188483	ILMN_188483	3110099E03RIK	scl18845.5_449				51706313	XM_488954	3110099E03Rik		ILMN_2453058	004850025	S	3	AGGAACCCGCATATCTGTCGCATAATGTCATCCTTCAGCATCTAAATGGA										
Mus musculus	RefSeq	ILMN_222388	ILMN_222388	LSM14A	NM_025948.2	NM_025948.2		67070	118129889	NM_025948.2	Lsm14a	NP_080224.1	ILMN_2748914	007570291	S	2609	CCTCTGGCACCTGTAAAACATCACTAACATAGTATGCGGGCCTGTGGCCT	7	-	35129803-35129852	7qB1	Mus musculus LSM14 homolog A (SCD6, S. cerevisiae) (Lsm14a), mRNA.				AU017544; AA407828; Tral; 2700023B17Rik	AU017544; AA407828; Tral; 2700023B17Rik
Mus musculus	MEEBO	ILMN_188134	ILMN_188134	4930485B16RIK	scl5692.1.1_126				51765799	XM_147444	4930485B16Rik		ILMN_1215423	001110653	S	7548	TTGAGCATTGACATTATGCTAGGCATCCTTCTAGCCTCTGAGGATAGGTC										
Mus musculus	RefSeq	ILMN_215355	ILMN_215355	OLFR720	NM_146392.1	NM_146392.1		258387	33238901	NM_146392.1	Olfr720	NP_666504.1	ILMN_3004522	004890441	S	888	GGCAGGGGCTTTAAAGAGGGTGATAGCAAGACACAGAGGAGCCTGCAGTG	14	-	15007657-15007706	14qA1	Mus musculus olfactory receptor 720 (Olfr720), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR274-2	MOR274-2
Mus musculus	RefSeq	ILMN_194095	ILMN_260758	GDF10	NM_145741.2	NM_145741.2		14560	40254186	NM_145741.2	Gdf10	NP_665684.2	ILMN_1249941	003120136	S	2289	CGGAGAGAGTCGATCCCATCCCCTGCAGAGGTAATAATGCAAGTTAGGTG	14	+	34748248-34748297	14qB	Mus musculus growth differentiation factor 10 (Gdf10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_233733	ILMN_233733	STX4A	NM_009294.2	NM_009294.2		20909	31981984	NM_009294.2	Stx4a	NP_033320.1	ILMN_2822053	000770474	S	1139	TCTTGGCATTGGGAGAGACAGAGACCCAGCTTTTGTGGAGGTGGGGCAGG	7	+	127639811-127639815:127639899-127639943	7qF3	Mus musculus syntaxin 4A (placental) (Stx4a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence TAS]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Stx4; Syn4	Stx4; Syn4
Mus musculus	RefSeq	ILMN_199235	ILMN_199235	LOC333615	XM_289690.2	XM_289690.2			38092189	XM_289690.2	LOC333615		ILMN_2534519	005720246	S	10	AGGAGGGCAGCGCCCAGGCTACCCAGGCTGGCACGCCGCTTCGGACCCGA										
Mus musculus	RefSeq	ILMN_222114	ILMN_222114	DDX25	NM_013932.3	NM_013932.3		30959	141801077	NM_013932.3	Ddx25	NP_038960.1	ILMN_1237338	002260113	S	1536	GAGGCCTTCGTTGTTTGTGGGCTAGTTTACGTGAGAATGTTTCAGCAGAG	9	-	35349516-35349565	9qA4	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 (Ddx25), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182) [goid 33391] [evidence IDA]	The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IDA]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [evidence IDA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	AW047046; GRTH	AW047046; GRTH
Mus musculus	RefSeq	ILMN_216715	ILMN_261619	LYG1	NM_027111.3	NM_027111.3		69541	141802162	NM_027111.3	Lyg1	NP_081387.1	ILMN_2674398	006480138	S	697	CTGACCCACTGATATGTCAAGCTGGTGAAGCCTGCAGTCGCACATCTGAG	1	-	38003634-38003683	1qB	Mus musculus lysozyme G-like 1 (Lyg1), mRNA. XM_978849	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]	2300002O18Rik	2300002O18Rik
Mus musculus	RefSeq	ILMN_223394	ILMN_223394	TBCEL	NM_173038.3	NM_173038.3		272589	146198715	NM_173038.3	Tbcel	NP_766626.1	ILMN_2763459	000780168	S	4787	ACCGAGAGGGGACTGGACTCTCAGGCCCTTTACAGTTGTCTCCTGCAGTT				9qA5.1	Mus musculus tubulin folding cofactor E-like (Tbcel), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Lrrc35; D330014K23; E130107N23Rik	Lrrc35; D330014K23; E130107N23Rik
Mus musculus	MEEBO	ILMN_224160	ILMN_224160	CER1	scl24173.2_450				6753409	NM_009887	Cer1		ILMN_2775793	001940092	S	1436	GAATAGTGAAGGTACTCTTAACAGTTTACACGTGGAAGGGGCTCAGGCAC						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IDA]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IGI]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]		
Mus musculus	RefSeq	ILMN_240697	ILMN_240697	1110017D15RIK	NM_028624.1	NM_028624.1		73721	114520610	NM_028624.1	1110017D15Rik	NP_082900.1	ILMN_3043178	004920121	I	120	GGTAGCAAATGTTTCGAGTTAGAGCTTAAGGTACCACGTGTGCCACTTCC	4	-	41454628-41454677	4qA5	Mus musculus RIKEN cDNA 1110017D15 gene (1110017D15Rik), transcript variant 2, mRNA. XM_896996 XM_911474 XM_921988 XM_921993 XM_921997 XM_922001 XM_922006 XM_984085 XM_984115 XM_984145 XM_984173 XM_984201 XM_984239				Cbe1; smrp1; RP23-100C7.3	Cbe1; smrp1; RP23-100C7.3
Mus musculus	RefSeq	ILMN_240697	ILMN_240697	1110017D15RIK	NM_028624.1	NM_028624.1		73721	114520610	NM_028624.1	1110017D15Rik	NP_082900.1	ILMN_3118081	004670553	A	491	GGTCACCGGCCAGGAATGCAATGTGCTGTTACAACTCCCCCGCCATCATT	4	-	41452621-41452670	4qA5	Mus musculus RIKEN cDNA 1110017D15 gene (1110017D15Rik), transcript variant 2, mRNA. XM_896996 XM_911474 XM_921988 XM_921993 XM_921997 XM_922001 XM_922006 XM_984085 XM_984115 XM_984145 XM_984173 XM_984201 XM_984239				Cbe1; smrp1; RP23-100C7.3	Cbe1; smrp1; RP23-100C7.3
Mus musculus	RefSeq	ILMN_211632	ILMN_240697	1110017D15RIK	NM_028624.1	NM_028624.1		73721	114520610	NM_028624.1	1110017D15Rik	NP_082900.1	ILMN_2617920	000540274	S	590	GGTGGTTCCCAGAGAAACAACTATGTAGTCCATCCTGAGTTTGTGTCTGA	4	-	41452123-41452172	4qA5	Mus musculus RIKEN cDNA 1110017D15 gene (1110017D15Rik), transcript variant 2, mRNA. XM_896996 XM_911474 XM_921988 XM_921993 XM_921997 XM_922001 XM_922006 XM_984085 XM_984115 XM_984145 XM_984173 XM_984201 XM_984239				Cbe1; smrp1; RP23-100C7.3	Cbe1; smrp1; RP23-100C7.3
Mus musculus	RefSeq	ILMN_202275	ILMN_231665	1700086D15RIK	XM_917005.2	XM_917005.2		74282	94390468	XM_917005.2	1700086D15Rik	XP_922098.1	ILMN_1230671	003940370	S	906	CTGCAGGATGAGGACACAGGATCTAGAAGTGCACGAAGGGGTGACAGGCC				11qB3	PREDICTED: Mus musculus RIKEN cDNA 1700086D15 gene (1700086D15Rik), mRNA.					
Mus musculus	MEEBO	ILMN_210804	ILMN_210804	LOC384418	IGKV8-34_AJ235958_Ig_kappa_variable_8-34_148	XM_357636.1			38084366	XM_357636.1	LOC384418		ILMN_2609359	004180128	S	154	GTGGCAACCAAAATAACTACTTGGCCTGGCACCAGCAGAAACCAGGACGA										
Mus musculus	RefSeq	ILMN_218007	ILMN_218007	RUVBL2	NM_011304.3	NM_011304.3		20174	142383697	NM_011304.3	Ruvbl2	NP_035434.1	ILMN_2690410	002470386	S	1337	ATGTGGAGATGAGTGAGGACGCCTACACAGTGCTGACCCGCATTGGGCTC	7	-	52677820-52677869	7qB4	Mus musculus RuvB-like protein 2 (Ruvbl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]	MGC144733; MGC144734; p47; mp47	MGC144733; MGC144734; p47; mp47
Mus musculus	RefSeq	ILMN_194930	ILMN_232240	EG330503	NM_001033540.2	NM_001033540.2		330503	141802898	NM_001033540.2	EG330503	NP_001028712.1	ILMN_2510971	000070021	S	992	GACCGTGGGAAGGCTTCATTCGTGGTTCCCTGCTTACTGTACATTGGAGA	7	+	30963265-30963314	7qB1	Mus musculus predicted gene, EG330503 (EG330503), mRNA.				B430201F14	B430201F14
Mus musculus	RefSeq	ILMN_258864	ILMN_258864	TDPOZ2	NM_001007222.2	NM_001007222.2		399673	124126980	NM_001007222.2	Tdpoz2	NP_001007223.2	ILMN_2819311	003120711	S	609	AGTTATCCTAGCAGCTCGCTCTCCAGTTTTCAGAGCCATGTTTGAACCTC	3|NT_080257.1	+	55583-55632	3qF2.1	Mus musculus TD and POZ domain containing 2 (Tdpoz2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212117	ILMN_232768	EG434674	NM_001013820.2	NM_001013820.2		434674	142345757	NM_001013820.2	EG434674	NP_001013842.1	ILMN_1236134	007650347	S	62	CCTGCAGTGGAGAAGCGATGAGGGACACATGAAGAACAACCCTACTTAGG	19	-	8206361-8206410	19qA	Mus musculus predicted gene, EG434674 (EG434674), mRNA. XM_922736 XM_922739 XM_922744 XM_922747					
Mus musculus	RefSeq	ILMN_217289	ILMN_217289	RRP7A	NM_029101.3	NM_029101.3		74778	142371277	NM_029101.3	Rrp7a	NP_083377.2	ILMN_1213124	007150386	S	4056	GTGGTAGATAGCACTGGGTCCTAGTGAGTATCTGATACCCAGTCTCATCT	15	-	82944082-82944131	15qE1	Mus musculus ribosomal RNA processing 7 homolog A (S. cerevisiae) (Rrp7a), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AA408146	AA408146
Mus musculus	MEEBO	ILMN_210486	ILMN_210486	CDC40	scl0071713.1_60				51765560	XM_483893	Cdc40		ILMN_2606108	004070286	S	3254	CGGGGCTTTCTCTTTTTTAAATCACATGCTGAACATTGCACTGCCTAGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]			
Mus musculus	RefSeq	ILMN_212007	ILMN_212007	NPHS1	NM_019459.2	NM_019459.2		54631	120586996	NM_019459.2	Nphs1	NP_062332.2	ILMN_2621716	003990128	S	3633	GACATGGCCTTCCCCGGACACCTGTATGACGAGGTGGAGAGAGTCTATGG	7	+	31267507-31267556	7qB1	Mus musculus nephrosis 1 homolog, nephrin (human) (Nphs1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	nephrin	nephrin
Mus musculus	MEEBO	ILMN_217891	ILMN_217891	5730427M17RIK	scl098814.1_180	NM_175297.2			31341548	NM_175297.2	5730427M17Rik		ILMN_1229066	001440673	S	4789	TAGAAGGAACGTGGTCTGTCCATGAAGCTCAGTAGGTGGTAGGGAGAGGG										
Mus musculus	RefSeq	ILMN_209459	ILMN_310613	LOC100039532	XM_001473099.1	XM_001473099.1		100039532	149263817	XM_001473099.1	LOC100039532	XP_001473149.1	ILMN_2595967	003990605	S	188	GCCCGAGATGAAACGGAGTTCTACTTAGGCAAGAGATGTGCTTATGTGTA	13	-	6661988-6662037	13qA1	PREDICTED: Mus musculus similar to ribosomal protein L35a (LOC100039532), mRNA.					
Mus musculus	RefSeq	ILMN_191575	ILMN_232254	1700037H04RIK	NM_026091.2	NM_026091.2		67326	141801935	NM_026091.2	1700037H04Rik	NP_080367.1	ILMN_1213070	005690228	S	1162	CCCCTACCCCCTCAGGTCTGTGGTACTTGGTTTTTAAATGACTGGTTGGG	2	-	130972090-130972139	2qF1	Mus musculus RIKEN cDNA 1700037H04 gene (1700037H04Rik), mRNA.				RP23-32L15.2	RP23-32L15.2
Mus musculus	RefSeq	ILMN_209356	ILMN_209356	CLDN10	NM_023878.2	NM_023878.2		58187	142357583	NM_023878.2	Cldn10	NP_076367.1	ILMN_1214954	000270575	S	804	CAAGACACCCAGAATGGGCTACACATACAACGGACCCACGTCTGCCATGT	14	+	119272919-119272930:119273414-119273451	14qE4	Mus musculus claudin 10 (Cldn10), transcript variant 1, mRNA.				D14Ertd728e; 6720456I16Rik	D14Ertd728e; 6720456I16Rik
Mus musculus	RefSeq	ILMN_198996	ILMN_198996	LOC268288	XM_193552.2	XM_193552.2			38090404	XM_193552.2	LOC268288		ILMN_1232090	006380187	S	1462	GCTCTGGCTGCTTTGGTGTCTGCTTTCCGTGTGTTTGGGATCGAGTGTCC										
Mus musculus	RefSeq	ILMN_215652	ILMN_215652	HPCAL4	NM_174998.3	NM_174998.3		170638	146198535	NM_174998.3	Hpcal4	NP_778163.1	ILMN_2662054	007400717	S	4216	TGGGTGAGGCTTTGTGTTGGCTTTAGAAATCACCACGGGGCTAAGAATAC				4qD2.2	Mus musculus hippocalcin-like 4 (Hpcal4), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI846570; NVP-2	AI846570; NVP-2
Mus musculus	MEEBO	ILMN_220424	ILMN_220424	3010022N24RIK	scl068069.1_6	XM_149833.1			20914999	XM_149833.1	3010022N24Rik		ILMN_1227414	003140739	S	880	CCCTGGCGCCTTGACTTGCTTAGGCTCGTACCTGCTCCCTTCTTTGATAC										
Mus musculus	RefSeq	ILMN_222300	ILMN_222300	HAT1	NM_026115.3	NM_026115.3		107435	142385474	NM_026115.3	Hat1	NP_080391.2	ILMN_2747651	000020246	S	1314	CCTGCAGATTTCTGTGCATCGTGCTGTGAACCTCTGATGACCCTAAAGTT	2	+	71279414-71279463	2qC2	Mus musculus histone aminotransferase 1 (Hat1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]	AA536933; Hat-1; 2410071B14Rik	AA536933; Hat-1; 2410071B14Rik
Mus musculus	RefSeq	ILMN_211669	ILMN_261050	FLNC	NM_001081185.1	NM_001081185.1		68794	124487138	NM_001081185.1	Flnc	NP_001074654.1	ILMN_2618364	004850180	S	8837	AAGTCACCCTCACAAACCGCCGTGCCTAAGGACTCTGTCAGGCCCGTCTG	6	+	29411559-29411608	6qA3.3	Mus musculus filamin C, gamma (Flnc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence TAS]	Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]	ABPL; ABP-280; 1110055E19Rik; Fln2	ABPL; ABP-280; 1110055E19Rik; Fln2
Mus musculus	RefSeq	ILMN_221234	ILMN_261050	FLNC	NM_001081185.1	NM_001081185.1		68794	124487138	NM_001081185.1	Flnc	NP_001074654.1	ILMN_1260135	002320019	S	5531	TGGAGGAGCCCGCGGAAATGCTGCAGATGCGCCAGCCCTATGCCCCTCTT	6	+	29402821-29402870	6qA3.3	Mus musculus filamin C, gamma (Flnc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence TAS]	Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]	ABPL; ABP-280; 1110055E19Rik; Fln2	ABPL; ABP-280; 1110055E19Rik; Fln2
Mus musculus	MEEBO	ILMN_218796	ILMN_218796	BRI3	scl21206.2.1_228	NM_018772.1			9055175	NM_018772.1	Bri3		ILMN_2700334	000870437	S	581	ACGCAGAGGTGGAAGGCAGCGACCTGCCCCCAAGGCTAAGGGTAACGTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_216112	ILMN_216112	5330411L03RIK	scl29194.2_475				51711884	XM_485738	5330411L03Rik		ILMN_1231895	001340195	S	2722	GATCCCCTCCTGCATATCTTAAACCACCCATCAATCACACTTGTAAAGGG										
Mus musculus	MEEBO	ILMN_209865	ILMN_209865	2610024G14RIK	scl26446.8.1_29	NM_019836.1			9790048	NM_019836.1	2610024G14Rik		ILMN_2599935	000010019	S	1940	ACACCTGAAGGGACTGCTCTGACTGTCCACCCCCCTGTCTTGCCATATAT						The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217870	ILMN_217870	CLDN14	NM_019500.3	NM_019500.3		56173	34328493	NM_019500.3	Cldn14	NP_062373.3	ILMN_1234745	000380209	S	1079	TTATCCTGCCAGGACGAGGCCCCCTACAGACCCTACCCGCCCCAGTCCAG	16	-	93919605-93919654	16qC4	Mus musculus claudin 14 (Cldn14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AI851731	AI851731
Mus musculus	RefSeq	ILMN_216751	ILMN_216751	POLN	NM_181857.2	NM_181857.2		272158	114158584	NM_181857.2	Poln	NP_862905.1	ILMN_2786217	006330324	S	2588	GCCCCTAAAAGTGAACTTGAGTGTTGGCCGCTCATGGGGACACCTGACCC	5	-	34350106-34350155	5qB2	Mus musculus DNA polymerase N (Poln), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence ISO]	POL4P	POL4P
Mus musculus	MEEBO	ILMN_214297	ILMN_214297	9430025M13RIK	scl32768.5_201	XM_133396.3			38086545	XM_133396.3	9430025M13Rik		ILMN_2646550	002070100	S	1394	TGAGCACTGTAGGAAGACCTTCTACTTCAAGAAACAACTCACTCGGCATC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222934	ILMN_222934	TRIM54	NM_021447.1	NM_021447.1		58522	10946823	NM_021447.1	Trim54	NP_067422.1	ILMN_2756950	000240435	S	1335	AGCCAAGGGATGCTGAGGATCTGCGCAGAGACCACCGCGCCACCAAGCTC	5	+	31439902-31439951	5qB1	Mus musculus tripartite motif-containing 54 (Trim54), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC130202; MGC130201; 4930486E09Rik; Rnf30; MURF; MURF-3; 4930566I02Rik	MGC130202; MGC130201; 4930486E09Rik; Rnf30; MURF; MURF-3; 4930566I02Rik
Mus musculus	RefSeq	ILMN_213974	ILMN_213974	GSTK1	NM_029555.2	NM_029555.2		76263	118130626	NM_029555.2	Gstk1	NP_083831.1	ILMN_2776008	005270377	S	859	CTTCTGTGCCTCACAAGTGCCTTTTGAAAAGCCTTAAATTCTGCATTCCC	6	+	42200369-42200418	6qB2.1	Mus musculus glutathione S-transferase kappa 1 (Gstk1), mRNA.	The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin cell wall [goid 30288] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IDA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IDA]	0610025I19Rik; AW260476	0610025I19Rik; AW260476
Mus musculus	RefSeq	ILMN_213974	ILMN_213974	GSTK1	NM_029555.2	NM_029555.2		76263	118130626	NM_029555.2	Gstk1	NP_083831.1	ILMN_2792924	005890487	S	801	ATCTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCACCTTTAGCTGTGCC	6	+	42200311-42200360	6qB2.1	Mus musculus glutathione S-transferase kappa 1 (Gstk1), mRNA.	The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin cell wall [goid 30288] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IDA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IDA]	0610025I19Rik; AW260476	0610025I19Rik; AW260476
Mus musculus	Riken	ILMN_201740	ILMN_201740	MRPL15	ri|2610044N23|ZX00045D13|AK011775|500					AK011775	Mrpl15		ILMN_1215584	006590064	S	105	GCCCAGTCCTAACTCCAGAAAACGGTTTCAGGCACCAGTATCAGCCTTTG						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]; The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome [goid 2] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]		
Mus musculus	RefSeq	ILMN_220546	ILMN_220546	TJP3	NM_013769.2	NM_013769.2		27375	114052810	NM_013769.2	Tjp3	NP_038797.2	ILMN_2723524	006900309	S	2155	CCGGACTGACAGCCCATCCAAGATCATCAAACTGGACACAGTGCGGGTGA	10	-	80737929-80737978	10qC1	Mus musculus tight junction protein 3 (Tjp3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ZO-3	ZO-3
Mus musculus	RefSeq	ILMN_220818	ILMN_220818	PGP	NM_025954.3	NM_025954.3		67078	118129884	NM_025954.3	Pgp	NP_080230.2	ILMN_2727318	005900360	S	950	CCTGACTTCTATGTTGACAGCATTGCCGACCTCTTGCCTGCCCTTCAAGG	17	+	24608459-24608508	17qA3.3	Mus musculus phosphoglycolate phosphatase (Pgp), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: 2-phosphoglycolate + H2O = glycolate + phosphate [goid 8967] [evidence IEA]	AI481330; MGC103027	AI481330; MGC103027
Mus musculus	RefSeq	ILMN_209798	ILMN_209798	2210010L05RIK	NM_178081.4	NM_178081.4		98682	146198861	NM_178081.4	2210010L05Rik	NP_835182.1	ILMN_2599306	003830253	S	3041	TAAAGTCATACCCTGACTTTGGAAAAAGAATGTGCCTTCTGTGAACAGTT				1qC1.1	Mus musculus RIKEN cDNA 2210010L05 gene (2210010L05Rik), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI836200; 9630025I22Rik; MMR2; AW212394	AI836200; 9630025I22Rik; MMR2; AW212394
Mus musculus	Riken	ILMN_202425	ILMN_202425	1700010M06RIK	ri|1700010M06|ZX00050G06|AK005845|576					AK005845	1700010M06Rik		ILMN_2549511	003710220	S	384	GGAAGAGACGTGAACATCGTCCGGGCCAATGGCAGGCCACAGAAGAGGCA										
Mus musculus	RefSeq	ILMN_221087	ILMN_221087	SLC22A8	NM_031194.3	NM_031194.3		19879	142345666	NM_031194.3	Slc22a8	NP_112471.2	ILMN_2730888	006400646	S	3272	CTCAGCTTGGATCAGTTCCATCCAAGCACTCAACAGAGGCTATTGCCACT	19	+	8686153-8686202	19qA	Mus musculus solute carrier family 22 (organic anion transporter), member 8 (Slc22a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]	Oat3; Roct	Oat3; Roct
Mus musculus	Riken	ILMN_207089	ILMN_207089	C430020E23RIK	ri|C430020E23|PX00667P16|AK082922|2917					AK082922	C430020E23Rik		ILMN_1221998	003420343	S	2664	GTGGGTGTGGCATCCCAAGATGTAGCCCCAGATTCCCCATTTCTGAGACC										
Mus musculus	RefSeq	ILMN_201596	ILMN_201596	SOX14	XM_284529.7	XM_284529.7		20669	149260177	XM_284529.7	Sox14	XP_284529.4	ILMN_1257039	006400139	S	1868	CAGCTAGGCACCATTTGCTCTTCCTGTGTGTGGGGAGGTGAAAGGCTTAA	9	-	99774876-99774925	9qE3.3	PREDICTED: Mus musculus SRY-box containing gene 14 (Sox14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201596	ILMN_201596	SOX14	XM_284529.7	XM_284529.7		20669	149260177	XM_284529.7	Sox14	XP_284529.4	ILMN_2664638	003400398	S	2198	CCCTCATTCCTCTGTTCATTTGTTGAACAAAGACGTTTTGAATAAAGACA	9	-	99774546-99774595	9qE3.3	PREDICTED: Mus musculus SRY-box containing gene 14 (Sox14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	Riken	ILMN_204024	ILMN_204024	TERF2	ri|A630098C24|PX00148G16|AK042508|1189					AK042508	Terf2		ILMN_1222324	001770494	S	929	GCTGGTTGGCGGGGCCTGGTTGGGCCTGGTTTTACTTCCATGAATGACGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32206] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32206] [evidence IMP]; A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse [goid 31848] [evidence IMP]; A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse [goid 31848] [evidence IDA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_243396	ILMN_243396	TMSB10	NM_025284.3	NM_025284.3		19240	86476070	NM_025284.3	Tmsb10	NP_079560.1	ILMN_3145331	003710278	A	252	TCATCTCCAAGACCCCCTCGTGATGTGGAGGAAGAGCCACCTGCAAGATG	6	-	72907520-72907569	6qC1	Mus musculus thymosin, beta 10 (Tmsb10), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]; The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers [goid 42989] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [evidence TAS]	Ptmb10; TB10	Ptmb10; TB10
Mus musculus	RefSeq	ILMN_243396	ILMN_243396	TMSB10	NM_025284.3	NM_025284.3		19240	86476070	NM_025284.3	Tmsb10	NP_079560.1	ILMN_3067068	005130273	I	9	CTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGAGCTCGGAAGGAGAAT	6	-	72908335-72908384	6qC1	Mus musculus thymosin, beta 10 (Tmsb10), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]; The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers [goid 42989] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [evidence TAS]	Ptmb10; TB10	Ptmb10; TB10
Mus musculus	RefSeq	ILMN_254223	ILMN_254223	OLFR564	NM_146359.1	NM_146359.1		258356	22129584	NM_146359.1	Olfr564	NP_666471.1	ILMN_2842554	002070523	S	808	GCTCCGCCATATGTCCATACTCTGATTGCCAATGCCTACCTGCTGATCCC	7	+	109952801-109952850	7qE3	Mus musculus olfactory receptor 564 (Olfr564), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR14-10	MOR14-10
Mus musculus	RefSeq	ILMN_214354	ILMN_214354	NUDC	NM_010948.1	NM_010948.1		18221	6754909	NM_010948.1	Nudc	NP_035078.1	ILMN_2962958	002900291	S	1193	GCTCCAAGGATTCACTGGAGAAGGGCTGGGTCTTGTCCTTGCCATTCGTC	4	-	133088483-133088532	4qD2.3	Mus musculus nuclear distribution gene C homolog (Aspergillus) (Nudc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Silg92; SIG-92	Silg92; SIG-92
Mus musculus	RefSeq	ILMN_214354	ILMN_214354	NUDC	NM_010948.1	NM_010948.1		18221	6754909	NM_010948.1	Nudc	NP_035078.1	ILMN_1249749	000130154	S	391	CAAGGAGTTGACTGATGAGGAGGCAGAGCGACTGCAACTGGAGATTGACC	4	-	133091477-133091490:133091583-133091618	4qD2.3	Mus musculus nuclear distribution gene C homolog (Aspergillus) (Nudc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Silg92; SIG-92	Silg92; SIG-92
Mus musculus	Riken	ILMN_205449	ILMN_205449	E330034F13RIK	ri|E330034F13|PX00318D10|AK054511|2439					AK054511	E330034F13Rik		ILMN_2572643	006590056	S	2380	GTGCCTAAGCCACATTAGCTACATTGTAATTATCCAATAAACATATAGGC										
Mus musculus	MEEBO	ILMN_209817	ILMN_209817	NOL8	scl0070930.1_123				51829610	XM_484255	Nol8		ILMN_2599478	001850441	S	4365	CCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224100	ILMN_244032	LOC672705	XR_003956.1	XR_003956.1		672705	94391710	XR_003956.1	LOC672705		ILMN_1236972	000840553	S	3438	ACCAGGTCTCAACCCCAGCACAGGAATCCCAACAAACTGGCTGCCTTCCT					PREDICTED: Mus musculus similar to max binding protein (LOC672705), mRNA.					
Mus musculus	RefSeq	ILMN_207470	ILMN_207470	KIF1B	NM_008441.2	NM_008441.2		16561	86990457	NM_008441.2	Kif1b	NP_032467.2	ILMN_3034877	002100243	I	6638	GTGGTCACTGCTGTAGCGGGTGCCTTCCTGGTCCTTTGTTGACTTGCCTT	4	-	148608221-148608270	4qE2	Mus musculus kinesin family member 1B (Kif1b), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence NAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence TAS]	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204
Mus musculus	RefSeq	ILMN_207470	ILMN_207470	KIF1B	NM_008441.2	NM_008441.2		16561	86990457	NM_008441.2	Kif1b	NP_032467.2	ILMN_3108623	000380170	A	1951	CGGAGTGAGAGGAGCAACACTGGTGAAGTTATTGTGACCTTGGAGCCCTG	4	-	148620507-148620529:148621337-148621363	4qE2	Mus musculus kinesin family member 1B (Kif1b), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence NAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence TAS]	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204
Mus musculus	RefSeq	ILMN_189061	ILMN_189061	ZFP398	NM_027477.2	NM_027477.2		272347	141803216	NM_027477.2	Zfp398	NP_081753.1	ILMN_2458022	001190017	S	414	GGGACAGCAGAGAAGAAACTAGCAAGCTGTGAAAAGACAGTGGCAGAGCT	6	+	47790440-47790489	6qB2.3	Mus musculus zinc finger protein 398 (Zfp398), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	5730513I23Rik; 6430539K21	5730513I23Rik; 6430539K21
Mus musculus	RefSeq	ILMN_189061	ILMN_189061	ZFP398	NM_027477.2	NM_027477.2		272347	141803216	NM_027477.2	Zfp398	NP_081753.1	ILMN_1242042	002000020	S	2510	TCGCTCAGTAATTGTTGGGAGGTTGTGCTTTAGCCACTTGTTATGTTGCC	6	+	47817324-47817373	6qB2.3	Mus musculus zinc finger protein 398 (Zfp398), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	5730513I23Rik; 6430539K21	5730513I23Rik; 6430539K21
Mus musculus	RefSeq	ILMN_198954	ILMN_198954	LOC331012	XM_286166.2	XM_286166.2			38090043	XM_286166.2	LOC331012		ILMN_2533520	002000731	S	235	GGACAGAAACCAGAAAGAGTCAAGCCTTTTATGGCTGGAGCTGTGGAGCA										
Mus musculus	Riken	ILMN_202750	ILMN_202750	LIPE	ri|4931402D16|PX00015P13|AK019846|2760					AK019846	Lipe		ILMN_2552000	005550139	S	731	GGAACTTGATCGCTGGAATTGGGCCCCGCGCCAGGACTGGAAAGAATTGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of triacylglycerol, any triester of glycerol [goid 19433] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 46340] [evidence IMP];  [goid 6361] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the reactions: diacylglycerol + H2O = monoacylglycerol + a carboxylate, triacylglycerol + H2O = diacylglycerol + a carboxylate, and monoacylglycerol + H2O = glycerol + a carboxylate [goid 33878] [evidence IEA]; Interacting selectively with an unprocessed ribosomal RNA transcript [goid 42134] [evidence ISS]; Any activity that brings about termination of transcription by RNA polymerase I [goid 3716] [evidence ISS]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]		
Mus musculus	RefSeq	ILMN_201383	ILMN_201383	LOC385073	XM_358033.1	XM_358033.1			38093435	XM_358033.1	LOC385073		ILMN_1239342	000430121	S	210	GCCCGAGCCGGACTACTTCACTGCACCCTTTGACAAGAGCAAGGTGGACT										
Mus musculus	RefSeq	ILMN_208992	ILMN_208992	BBOX1	NM_130452.1	NM_130452.1		170442	18485501	NM_130452.1	Bbox1	NP_569719.1	ILMN_2591533	004260368	S	1565	ACTGTTTTATAAATGATTAAAGCTTGTGTTTCAAATAAAAGATCTTAAAA	2	-	110105253-110105302	2qE3	Mus musculus butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) (Bbox1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 45329] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 4-trimethylammoniobutanoate + 2-oxoglutarate + O2 = 3-hydroxy-4-trimethylammoniobutanoate + succinate + CO2 [goid 8336] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AI874739	AI874739
Mus musculus	RefSeq	ILMN_208992	ILMN_208992	BBOX1	NM_130452.1	NM_130452.1		170442	18485501	NM_130452.1	Bbox1	NP_569719.1	ILMN_2686029	000450072	S	1260	CTCCTGGCCTTAGACTTTAGTGCAAGTCCAGTGACTGAATGCTCCTATCT	2	-	110105558-110105607	2qE3	Mus musculus butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) (Bbox1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 45329] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 4-trimethylammoniobutanoate + 2-oxoglutarate + O2 = 3-hydroxy-4-trimethylammoniobutanoate + succinate + CO2 [goid 8336] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AI874739	AI874739
Mus musculus	RefSeq	ILMN_222503	ILMN_227182	1700106N22RIK	NM_028576.2	NM_028576.2		73582	141802462	NM_028576.2	1700106N22Rik	NP_082852.1	ILMN_1242751	002260048	S	247	CAGAAGCCACAAAAAAGGGAACTGAAAAAGAGGCTGGTGTGTGGGTCCAG	17	+	85495912-85495961	17qE4	Mus musculus RIKEN cDNA 1700106N22 gene (1700106N22Rik), mRNA. XM_899398 XM_899405 XM_918109 XM_925497 XM_925501 XM_925503 XM_925505 XM_925507 XM_989263 XM_989293 XM_989318 XM_989355 XM_989382 XM_989412 XM_989447				AV099781	AV099781
Mus musculus	RefSeq	ILMN_208729	ILMN_208729	DCUN1D4	NM_178896.4	NM_178896.4		100737	146198790	NM_178896.4	Dcun1d4	NP_849227.1	ILMN_1259737	003450452	S	3507	GCCATGGTAGCCTTTGGCGTGCCCCTTTTGAAGCATGAACTCTTGTGTTC				5qC3.3	Mus musculus DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) (Dcun1d4), mRNA.				AI836376; MGC117952	AI836376; MGC117952
Mus musculus	Riken	ILMN_205261	ILMN_205261	E330013M12RIK	ri|E330013M12|PX00211E20|AK054306|1635					AK054306	E330013M12Rik		ILMN_2571211	006020598	S	1402	GCCATTGGAATGGAGACAATGGAATACTTACTCAGTGGTCAGATGGACAC										
Mus musculus	RefSeq	ILMN_218416	ILMN_218416	FEN1	NM_007999.3	NM_007999.3		14156	47132513	NM_007999.3	Fen1	NP_032025.2	ILMN_1259473	003460037	S	1921	GAAATTTGAACTTGCTGCCTGCTGAGTCCAGTAGTTGTGCAGGGAGTGAG	19	-	10273873-10273922	19qA	Mus musculus flap structure specific endonuclease 1 (Fen1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]	Catalysis of the cleavage of a flap structure in DNA, but not other DNA structures; processes the ends of Okazaki fragments in lagging strand DNA synthesis [goid 48256] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IDA]	AW538437	AW538437
Mus musculus	RefSeq	ILMN_184387	ILMN_243228	LEPREL1	NM_173379.2	NM_173379.2		210530	118129815	NM_173379.2	Leprel1	NP_775555.1	ILMN_1249635	006330086	S	2095	CACTGGACCCTCTTTACCGAGAACTGGAGCGGATACAGGCAGATGAAGTG	16	-	25960512-25960536:25965810-25965834	16qB1	Mus musculus leprecan-like 1 (Leprel1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-3-hydroxy-L-proline + succinate + CO2 [goid 19797] [evidence IEA]	AW553532; 4832416N06; Mlat4	AW553532; 4832416N06; Mlat4
Mus musculus	Riken	ILMN_203720	ILMN_203720	9830107H15RIK	ri|9830107H15|PX00117H10|AK036432|2592					AK036432	9830107H15Rik		ILMN_1243754	000990768	S	2448	GCTATCAACTGAAGCTCTTTGGGAGCCCTCAGGACCCTCCATGCTGTCTC										
Mus musculus	RefSeq	ILMN_212355	ILMN_212355	ZFP672	NM_178761.3	NM_178761.3		319475	142382632	NM_178761.3	Zfp672	NP_848876.1	ILMN_1258449	000610241	S	3047	GCTGGTGATATTGTTACTTGCTTGGGTTTGTGACACCAAGAACCCCTTTG				11qB1.3	Mus musculus zinc finger protein 672 (Zfp672), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4930511N19Rik; RP23-386K17.2; 4930488P06Rik	4930511N19Rik; RP23-386K17.2; 4930488P06Rik
Mus musculus	MEEBO	ILMN_215859	ILMN_215859	ALDOA-PS2	scl24223.1.37_22	NM_181346.2			31343424	NM_181346.2	Aldoa-ps2		ILMN_2664521	000460563	S	1656	AAACACGAATTTGTTTCAACTGAACTAATACCTATGCATCCATTTCACCT										
Mus musculus	RefSeq	ILMN_214408	ILMN_260350	E130102H24RIK	XM_992447.1	XM_992447.1		77866	94372074	XM_992447.1	E130102H24Rik	XP_997541.1	ILMN_2647694	006940156	S	636	TGACAGCTTTGCATTTGGTCCTTCACTGTTGGGTGGTCAGAGTTAAACAG				4qC6	PREDICTED: Mus musculus RIKEN cDNA E130102H24 gene (E130102H24Rik), mRNA.					
Mus musculus	Riken	ILMN_204840	ILMN_204840	A130028H19RIK	ri|A130028H19|PX00122B13|AK037589|1889					AK037589	A130028H19Rik		ILMN_1250457	007550020	S	1613	GCCAGGGCTACACAGAGAAACCCTATGTCAAAGCCCTCCCCCCCAAAAAA										
Mus musculus	RefSeq	ILMN_191630	ILMN_191630	ZMYND19	NM_026021.1	NM_026021.1		67187	13385525	NM_026021.1	Zmynd19	NP_080297.1	ILMN_1257785	006650743	S	20	CGGCGGGCGCGAGGCGGCGGCGGTGGCCCGATCCCGGCCCAGCCTCGTCC	2	+	24771830-24771879	2qA3	Mus musculus zinc finger, MYND domain containing 19 (Zmynd19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AU014915; 2700064H14Rik; mizip; AA536891	AU014915; 2700064H14Rik; mizip; AA536891
Mus musculus	RefSeq	ILMN_212236	ILMN_253973	ITCH	NM_008395.2	NM_008395.2		16396	124487316	NM_008395.2	Itch	NP_032421.2	ILMN_2624286	000130477	S	125	GGCCTTCTGGAAACAACGCCTTAACCCTAAGAAGTGACTCAGCCATTGAG	2	+	154963951-154964000	2qH1	Mus musculus itchy, E3 ubiquitin protein ligase (Itch), mRNA. XM_902526 XM_902527 XM_902529 XM_907054 XM_976340	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence ISA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	KIAA4011; C230047C07Rik; 8030492O04Rik; 6720481N21Rik; A130065M08; mKIAA4011	KIAA4011; C230047C07Rik; 8030492O04Rik; 6720481N21Rik; A130065M08; mKIAA4011
Mus musculus	RefSeq	ILMN_213640	ILMN_253126	BCLP2	NM_001080816.1	NM_001080816.1		229687	124249100	NM_001080816.1	Bclp2	NP_001074285.1	ILMN_1225950	005090673	S	1112	TCTGCAACCAGGGCCAATTCCCTCTGACATCTACCCTGAAGAATGCCCTC	3	-	105820900-105820949	3qF2.2	Mus musculus chitinase like protein 2 (Bclp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Bclp; MGC156874; Bclp1	Bclp; MGC156874; Bclp1
Mus musculus	Riken	ILMN_205105	ILMN_205105	D830037I21RIK	ri|D830037I21|PX00199N18|AK052911|1155					AK052911	D830037I21Rik		ILMN_1215654	004210368	S	943	GCCGGTGACGGAACAGATTTGCTAGTGAGAGAGAGTGAGAGCAATCGGGC										
Mus musculus	MEEBO	ILMN_218258	ILMN_218258	4632415L05RIK	scl0070808.1_164	NM_027561.2			27754021	NM_027561.2	4632415L05Rik		ILMN_2701030	003120592	S	907	GAGGAAAATGAGCCAGAAAGGCGAAGAGAAAGGGGATCCAGCAAAGATCT										
Mus musculus	MEEBO	ILMN_218258	ILMN_218258	4632415L05RIK	scl0070808.1_164	NM_027561.2			27754021	NM_027561.2	4632415L05Rik		ILMN_2693645	007510753	S	874	GTGAGGGGGCGCATCAACAAGCAGATGAGAGAAGAGGAAAATGAGCCAGA										
Mus musculus	RefSeq	ILMN_212285	ILMN_212285	EGFL7	NM_198724.1	NM_198724.1		353156	38570124	NM_198724.1	Egfl7	NP_942017.1	ILMN_1215919	002060291	S	1039	CCAGCAGCTGGACCGAATTGATTCACTGAGTGAGCAGGTGTCCTTCTTGG	2	+	26447732-26447781	2qA3	Mus musculus EGF-like domain 7 (Egfl7), transcript variant b, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [pmid 15085134] [evidence IEP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [pmid 15162510] [evidence IEP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	VE-statin; Zneu1	VE-statin; Zneu1
Mus musculus	RefSeq	ILMN_219655	ILMN_233634	MYO16	NM_001081397.1	NM_001081397.1		244281	124487112	NM_001081397.1	Myo16	NP_001074866.1	ILMN_1251959	002690730	S	3036	GTTGCTTTCAAAGGTCAAGGTGCGGCCTTCACTGTCATGCACTACGCAGG	8	+	10476135-10476184	8qA1.1	Mus musculus myosin XVI (Myo16), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence ISO]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]	C230040D10Rik; mKIAA0865; KIAA0865; Gm1105	C230040D10Rik; mKIAA0865; KIAA0865; Gm1105
Mus musculus	Riken	ILMN_203555	ILMN_203555	GRIK2	ri|9330159L23|PX00106F01|AK034147|4366					AK034147	Grik2		ILMN_1244418	007380441	S	4288	GTTCCTGTCAGGGGTGTGATGTCAAGCATGAACGGTAGTGCGTGTGCACC						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]; A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex [goid 8328] [evidence IC ]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence TAS]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IGI]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity [goid 48172] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA];  [goid 15277] [evidence IGI];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA];  [goid 15277] [evidence IGI];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 15277] [evidence IMP]		
Mus musculus	RefSeq	ILMN_210457	ILMN_210457	MTERFD3	NM_028832.1	NM_028832.1		74238	46518495	NM_028832.1	Mterfd3	NP_083108.1	ILMN_2997379	004070671	S	1111	CCTAGAAGAGAGAATCCAGGCACTGCTGAAAGAAGGCATCTCCATAGCTC	10	-	84549612-84549661	10qC1	Mus musculus MTERF domain containing 3 (Mterfd3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA]		1700007D05Rik	1700007D05Rik
Mus musculus	RefSeq	ILMN_210457	ILMN_210457	MTERFD3	NM_028832.1	NM_028832.1		74238	46518495	NM_028832.1	Mterfd3	NP_083108.1	ILMN_2997382	002140524	S	1307	AGCAAAATGCAAGCCAAACAAGGAAGGCCATTATTTAACCCTGTGGCATC	10	-	84549416-84549465	10qC1	Mus musculus MTERF domain containing 3 (Mterfd3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA]		1700007D05Rik	1700007D05Rik
Mus musculus	RefSeq	ILMN_213471	ILMN_208682	HIST2H2BE	NM_178214.3	NM_178214.3		319190	141801732	NM_178214.3	Hist2h2be	NP_835586.2	ILMN_1231066	002510379	S	2542	TAAATCCATTCACTGCATGTGCATTTTCAAGTGGGTAGACACTGTTATTA	3	+	96027585-96027634	3qF2.1	Mus musculus histone cluster 2, H2be (Hist2h2be), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AV127319; H2b-613; T25626	AV127319; H2b-613; T25626
Mus musculus	RefSeq	ILMN_220803	ILMN_314590	LOC100046264	XM_001476094.1	XM_001476094.1		100046264	149250396	XM_001476094.1	LOC100046264	XP_001476144.1	ILMN_2727142	005390427	S	637	CCCAGAGCTGTGCGAGGCACAGGGGCTTCCAATCGAAGCAGCTTTTTCCT					PREDICTED: Mus musculus hypothetical protein LOC100046264 (LOC100046264), mRNA.					
Mus musculus	RefSeq	ILMN_184420	ILMN_184420	ZBTB8B	NM_153541.3	NM_153541.3		215627	142377519	NM_153541.3	Zbtb8b	NP_705769.2	ILMN_2418483	003440386	S	2470	GGTTTCAAGCCGGTCTGCTTTTCACCCACTCTGCAGCCAGGTCACAACTG	4	-	129103777-129103826	4qD2.2	Mus musculus zinc finger and BTB domain containing 8b (Zbtb8b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC38362; BC023839; AV220464; BOZF1	MGC38362; BC023839; AV220464; BOZF1
Mus musculus	MEEBO	ILMN_209695	ILMN_209695	1700041C02RIK	scl0073332.1_46	XM_131596.2			28545800	XM_131596.2	1700041C02Rik		ILMN_2598309	004210577	S	3137	CTGCGCTTTGCACTTAGTGTCCTTATTCAAGTATGTGTTCATTGGAGGAC										
Mus musculus	RefSeq	ILMN_206122	ILMN_254547	GPRASP1	NM_001005385.1	NM_001005385.1		67298	53729354	NM_001005385.1	Gprasp1	NP_001005385.1	ILMN_1219563	004480075	S	546	TGCCCCGTGGAGTACACTCTTACCCAGACCAACAGCAACCACCACTGCTC	X	+	132283295-132283321:132286484-132286506	XqF1	Mus musculus G protein-coupled receptor associated sorting protein 1 (Gprasp1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C87852; MGC100209; GASP1; GASP; 3110031O14Rik; 2210415K24Rik	C87852; MGC100209; GASP1; GASP; 3110031O14Rik; 2210415K24Rik
Mus musculus	RefSeq	ILMN_219331	ILMN_254547	GPRASP1	NM_001005385.1	NM_001005385.1		67298	53729354	NM_001005385.1	Gprasp1	NP_001005385.1	ILMN_1224770	003120129	S	5409	CCCAGCTGCTTCCTTGTTTCAGTGTACCTCTCTAATGCTGGTGGCAATTC	X	+	132337741-132337790	XqF1	Mus musculus G protein-coupled receptor associated sorting protein 1 (Gprasp1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C87852; MGC100209; GASP1; GASP; 3110031O14Rik; 2210415K24Rik	C87852; MGC100209; GASP1; GASP; 3110031O14Rik; 2210415K24Rik
Mus musculus	RefSeq	ILMN_222106	ILMN_222106	CDCA3	NM_013538.3	NM_013538.3		14793	32129294	NM_013538.3	Cdca3	NP_038566.1	ILMN_2832219	004920148	S	1182	GGGTTTAGCTATTGCTTACCTGCTTGTAATTTCCAGGTCCCCCTCTCGAC	6	+	124799073-124799122	6qF2	Mus musculus cell division cycle associated 3 (Cdca3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410005A12Rik; Grcc8; C8; Tome-1	2410005A12Rik; Grcc8; C8; Tome-1
Mus musculus	RefSeq	ILMN_223705	ILMN_223705	PKN3	NM_153805.1	NM_153805.1		263803	24418928	NM_153805.1	Pkn3	NP_722500.1	ILMN_1242571	001300296	S	2846	CACGGCAGCATGGGTGGCTTTTCTTTTTAATACTTGACTTTATATAGAGC	2	+	29938396-29938445	2qB	Mus musculus protein kinase N3 (Pkn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	BC034126; MGC31699; AW209115	BC034126; MGC31699; AW209115
Mus musculus	RefSeq	ILMN_192633	ILMN_192633	V1RC15	NM_134170.3	NM_134170.3		171188	142381477	NM_134170.3	V1rc15	NP_598931.1	ILMN_2489903	005860112	S	2241	AATATCTGATGGTAGTTTTAATTCTGGTTCCTAATTATAACCTATGGTTT	6	-	66502328-66502377	6qC1	Mus musculus vomeronasal 1 receptor, C15 (V1rc15), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	MGC141380; MGC141379	MGC141380; MGC141379
Mus musculus	RefSeq	ILMN_213969	ILMN_213969	C230078M08RIK	NM_176995.2	NM_176995.2		319749	31342547	NM_176995.2	C230078M08Rik	NP_795969.1	ILMN_1245335	006130482	S	2579	CTCTTGCAGTTTGCAGGTGGAATGATAGTGTTCACCCCCACCCATCCCCG	17	+	26582996-26583045	17qA3.3	Mus musculus RIKEN cDNA C230078M08 gene (C230078M08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219774	ILMN_219774	ABHD4	NM_134076.1	NM_134076.1		105501	19527301	NM_134076.1	Abhd4	NP_598837.1	ILMN_2713464	006370270	S	2127	CTCTCCAGTGAATCTCATTCCAGGTCCTGCTCTAAGGCTCTGGGGACTAG	14	+	54888630-54888679	14qC2	Mus musculus abhydrolase domain containing 4 (Abhd4), mRNA.		The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]	1110035H23Rik; AI429574	1110035H23Rik; AI429574
Mus musculus	RefSeq	ILMN_185517	ILMN_325093	LOC100048163	XM_001479665.1	XM_001479665.1		100048163	149249502	XM_001479665.1	LOC100048163	XP_001479715.1	ILMN_1258445	001770762	S	3430	AATTGCTGTGAACGGACCGCCCATCGCCAACTTTGATGCCAAGCGAGCCC					PREDICTED: Mus musculus similar to hCG1991368 (LOC100048163), mRNA.					
Mus musculus	RefSeq	ILMN_196989	ILMN_196989	LOC238333	XM_138106.2	XM_138106.2			38050571	XM_138106.2	LOC238333		ILMN_2526509	002650630	S	1415	CCCCAGAGTTTGAGCATCTTACCTGGAGCCCAGAAAGGGTTGCAGAGTGG										
Mus musculus	RefSeq	ILMN_207393	ILMN_211334	ELOVL6	NM_130450.2	NM_130450.2		170439	91598889	NM_130450.2	Elovl6	NP_569717.1	ILMN_1228218	005090762	S	2298	GACCAAATCAGAAGAGAGAGAGAACCTCTATGCTTCAAGTAAGCGTCATA	3	+	129337760-129337809	3qG3	Mus musculus ELOVL family member 6, elongation of long chain fatty acids (yeast) (Elovl6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The elongation of a fatty acid chain by the sequential addition of two-carbon units [goid 30497] [evidence IDA]	Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor) [goid 16747] [evidence IDA]	MGC107467; FAE; C77826; LCE	MGC107467; FAE; C77826; LCE
Mus musculus	RefSeq	ILMN_211334	ILMN_211334	ELOVL6	NM_130450.2	NM_130450.2		170439	91598889	NM_130450.2	Elovl6	NP_569717.1	ILMN_2614752	000670608	S	5635	GTGGCACTTCAGACTTTTGTTCTCCTGGTTGATCAAGGTGTTGCCTGGTG	3	+	129341097-129341146	3qG3	Mus musculus ELOVL family member 6, elongation of long chain fatty acids (yeast) (Elovl6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The elongation of a fatty acid chain by the sequential addition of two-carbon units [goid 30497] [evidence IDA]	Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor) [goid 16747] [evidence IDA]	MGC107467; FAE; C77826; LCE	MGC107467; FAE; C77826; LCE
Mus musculus	RefSeq	ILMN_258207	ILMN_258207	MFAP1B	NM_001081975.1	NM_001081975.1		100034361	126517471	NM_001081975.1	Mfap1b	NP_001075444.1	ILMN_2802103	004390075	S	1692	CTGAGTGTTTGTCTAGCCTGGATCAGATACCTGGACATATGAATGGATGG				2qE5	Mus musculus microfibrillar-associated protein 1B (Mfap1b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_211324	ILMN_211324	FEM1C	scl51436.1.1_135	NM_175117.2			31341176	NM_175117.2	Fem1c		ILMN_2614663	005550504	S	2988	GGCTCTGTAGTGCAGTCGAGATGTTTTATTATTTCTGTGGGTGGGAACTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]			
Mus musculus	RefSeq	ILMN_214353	ILMN_214353	WDR61	NM_023191.2	NM_023191.2		66317	70778818	NM_023191.2	Wdr61	NP_075680.1	ILMN_3124364	001010767	A	1009	TAAACACCAGCATCCTCGGGGCTAGGGCCTCAGACTACACAGGGTTGATC	9	-	54565105-54565152:54565153-54565154	9qA5.3	Mus musculus WD repeat domain 61 (Wdr61), transcript variant 2, mRNA.				REC14; 2700038L12Rik; 2810418I05Rik	REC14; 2700038L12Rik; 2810418I05Rik
Mus musculus	RefSeq	ILMN_214353	ILMN_214353	WDR61	NM_023191.2	NM_023191.2		66317	70778818	NM_023191.2	Wdr61	NP_075680.1	ILMN_2647119	006020706	S	1091	AGTACAGCATATATTGTAGAACTTTTGTAGATACAATATAAATTTTTCCT	9	-	54565023-54565072	9qA5.3	Mus musculus WD repeat domain 61 (Wdr61), transcript variant 2, mRNA.				REC14; 2700038L12Rik; 2810418I05Rik	REC14; 2700038L12Rik; 2810418I05Rik
Mus musculus	MEEBO	ILMN_215295	ILMN_215295	DDX46	scl44724.21.5_2	NM_145975.1			22122416	NM_145975.1	Ddx46		ILMN_2657734	003850041	S	2109	CGAGCTGGCTGTGCAGAAAGCAAAGGCAGAGATCACCAGGCTCATAAAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]		
Mus musculus	MEEBO	ILMN_224207	ILMN_224207	PSAP	scl38880.29_102				34328184	NM_011179	Psap		ILMN_2776600	005560470	S	2232	GAATGTAACTTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]			
Mus musculus	RefSeq	ILMN_196958	ILMN_259980	SLC38A6	XM_916892.2	XM_916892.2		625098	94392780	XM_916892.2	Slc38a6	XP_921985.1	ILMN_1214469	001090079	S	1354	CCTGCTCCTCACAGGCGCTGTGGTCGGAAGCTTCAGTTTAGTGCTCATCA				12qC3	PREDICTED: Mus musculus solute carrier family 38, member 6 (Slc38a6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_218432	ILMN_218432	SLC25A12	NM_172436.2	NM_172436.2		78830	31982066	NM_172436.2	Slc25a12	NP_766024.1	ILMN_2972855	000650390	S	2615	ATAAGAAACGCGTGGGAAGGGTGCTTGCCCGTGGATGCCAGAGGATGAGC	2	-	71075393-71075442	2qC2	Mus musculus solute carrier family 25 (mitochondrial carrier, Aralar), member 12 (Slc25a12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of transferring reducing equivalents from the cytosol into the mitochondria; NADH is used to synthesise malate in the cytosol; this compound is then transported into the mitochondria where it is converted to oxaloacetate using NADH, the oxaloacetate reacts with gluamate to form aspartate, and the aspartate then returns to the cytosol to complete the cycle [goid 43490] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BB129864; B230107K20Rik; AI839531; 2610002D09Rik	BB129864; B230107K20Rik; AI839531; 2610002D09Rik
Mus musculus	RefSeq	ILMN_198685	ILMN_316229	LOC100047167	XM_001477568.1	XM_001477568.1		100047167	149257357	XM_001477568.1	LOC100047167	XP_001477618.1	ILMN_1222315	003460026	S	3775	GGTGCTCATGTGTTTTGGGGACAAAGGTGAAATGAGTCTGTTGTCACACC					PREDICTED: Mus musculus similar to mKIAA0990 protein (LOC100047167), mRNA.					
Mus musculus	RefSeq	ILMN_211999	ILMN_211999	SLC26A11	NM_178743.3	NM_178743.3		268512	85540462	NM_178743.3	Slc26a11	NP_848858.2	ILMN_2621606	003060669	S	2347	TCATGTGTTTTTTAAATGGAAGTCACTCTGGTGTTTTTGTAAAGCAAAAC	11	+	119242045-119242094	11qE2	Mus musculus solute carrier family 26, member 11 (Slc26a11), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	 [goid 15380] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	RP23-25M3.3; F630021I08Rik	RP23-25M3.3; F630021I08Rik
Mus musculus	Riken	ILMN_202818	ILMN_202818	LPIN2	ri|9130211E06|PX00061O10|AK033662|1538					AK033662	Lpin2		ILMN_2552541	001050148	S	1442	CTGGCCTCTGTGGGCACCAGGCACACAGCCATATATCAGGCAAAACATGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]		
Mus musculus	MEEBO	ILMN_191350	ILMN_191350	CD200	scl017470.1_35				31543262	NM_010818	Cd200		ILMN_3160771	007550671	S	1157	CCAGCTCTCAGACCGACTAGGGCTCCCATCGGAGGAACAAATCGTAGTCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_191350	ILMN_191350	CD200	scl017470.1_35				31543262	NM_010818	Cd200		ILMN_3160770	004890451	S	1642	GTAGTTCACATCTTTACAAAAGCATGCTTTCCCTATCCCATTGGGCCCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211164	ILMN_211164	D030070L09RIK	NM_172625.1	NM_172625.1		225280	27369893	NM_172625.1	D030070L09Rik	NP_766213.1	ILMN_2946873	003390121	S	1870	GCATTTTTCTGAACCCATGCCTCTTGGGACGAGATCACAGGACTTGACCC	18	-	24248211-24248260	18qA2	Mus musculus RIKEN cDNA D030070L09 gene (D030070L09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223171	ILMN_223171	MRGPRF	NM_145379.2	NM_145379.2		211577	118130108	NM_145379.2	Mrgprf	NP_663354.1	ILMN_2760254	000010577	S	1810	CTTCCAGGCCACTGTAGTCCACTGCTAAGTCCTCAATCTCCTGTACCCAT	7	+	152495266-152495315	7qF5	Mus musculus MAS-related GPR, member F (Mrgprf), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	BC019711; MGC18825; MrgF	BC019711; MGC18825; MrgF
Mus musculus	RefSeq	ILMN_185797	ILMN_185797	V1RH5	NM_134214.1	NM_134214.1		171248	21955273	NM_134214.1	V1rh5	NP_598975.1	ILMN_1229904	006590386	S	987	CAGGGATGGGCTTCTGTTTGAATGTTGTCATGCTCAGTTGAAGAAACTGA	13	+	23127193-23127242	13qA3.1	Mus musculus vomeronasal 1 receptor, H5 (V1rh5), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]		
Mus musculus	RefSeq	ILMN_206069	ILMN_321368	LOC100039607	XM_001473184.1	XM_001473184.1		100039607	149250503	XM_001473184.1	LOC100039607	XP_001473234.1	ILMN_1241482	002260376	S	1130	GGTAGGGGTGCTTGCCACAAAGCCTGACTACCTGAGTTTGATCCTGGTAC	2	+	180703113-180703162	2qH4	PREDICTED: Mus musculus hypothetical protein LOC100039607 (LOC100039607), mRNA.					
Mus musculus	RefSeq	ILMN_192363	ILMN_248345	PA2G4	NM_011119.3	NM_011119.3		18813	142383894	NM_011119.3	Pa2g4	NP_035249.1	ILMN_1248733	004640411	S	873	GGCCTGAAAATGAAAACTTCACGTGCCTTTTTCAGTGAGGTGGAACGGCG	10	-	127998000-127998049	10qD3	Mus musculus proliferation-associated 2G4 (Pa2g4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence ISA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	Plfap; Ebp1; 38kDa; AA672939	Plfap; Ebp1; 38kDa; AA672939
Mus musculus	RefSeq	ILMN_210438	ILMN_210438	OLFR585	NM_147087.1	NM_147087.1		259091	22128790	NM_147087.1	Olfr585	NP_667298.1	ILMN_2946430	003520040	S	603	TCGGGCAAATAACATCTGTGGACTAGTTGATCTCATTCTGACGACAGGGC	7	+	102972166-102972215	7qE3	Mus musculus olfactory receptor 585 (Olfr585), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR14-4	MOR14-4
Mus musculus	RefSeq	ILMN_194955	ILMN_260764	DPEP2	NM_176913.3	NM_176913.3		319446	32880213	NM_176913.3	Dpep2	NP_795887.2	ILMN_2692316	007150333	S	1430	GTCTACATACCCAGTGCTCATAGAGGAGTTGCTGAGACGAGGCTGGAATG	8	-	108509355-108509404	8qD3	Mus musculus dipeptidase 2 (Dpep2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain, in a reaction that requires a free N-terminal amino group, C-terminal carboxyl group or both [goid 8238] [evidence IDA]	MBD-2; F630103D06Rik	MBD-2; F630103D06Rik
Mus musculus	MEEBO	ILMN_219095	ILMN_219095	TCF7L2	scl000500.1_44				15011289	AF363724	Tcf7l2		ILMN_2704212	007610431	S	636	CACTGTCAGCACGCAAGTCTTCAGGGACACGAAAAGCAGCCACTCCTTAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 30538] [evidence IGI]; The process by which the anatomical structures of the hindgut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48619] [evidence IGI]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]		
Mus musculus	RefSeq	ILMN_214875	ILMN_214875	CTSC	NM_009982.3	NM_009982.3		13032	141802487	NM_009982.3	Ctsc	NP_034112.2	ILMN_1238486	001030368	S	1895	GAATTTTTGTCACCTACTTCTTCCCTTAGAAGCATTTATGCTCCATGGAC	7	+	95458850-95458899	7qE1	Mus musculus cathepsin C (Ctsc), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	DPP1; AI047818; DPPI	DPP1; AI047818; DPPI
Mus musculus	RefSeq	ILMN_194796	ILMN_314795	1700030C10RIK	XR_035444.1	XR_035444.1		69513	149262887	XR_035444.1	1700030C10Rik		ILMN_2509674	002100064	S	1402	GGGCTAAAGAACTTGAAGCTGGATGACCTGTTTCTCAAGCGCTATGCGTG	12	-	20810525-20810574	12qA1.2	PREDICTED: Mus musculus RIKEN cDNA 1700030C10 gene (1700030C10Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_218341	ILMN_256604	2310079G19RIK	XM_489598.3	XM_489598.3		69699	149267980	XM_489598.3	2310079G19Rik	XP_489598.1	ILMN_2694562	004850403	S	742	TCCTTTTTAGCTGAACTTCTTGGTGCCTTAAGGGTGTGTATCACTTACTT				16qC3.3	PREDICTED: Mus musculus RIKEN cDNA 2310079G19 gene (2310079G19Rik), mRNA.					
Mus musculus	MEEBO	ILMN_186283	ILMN_186283	ADAM11	scl40853.26_29				6752959	NM_009613	Adam11		ILMN_2434200	006400239	S	4	GGAGGCAGGGCCCGGGGCCCACATTAAAGATTAAAGATCACATTCTGGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217848	ILMN_313385	H2AFV	XM_001476068.1	XM_001476068.1		77605	149261600	XM_001476068.1	H2afv	XP_001476118.1	ILMN_2703385	004480102	S	195	GCATCCACAGACACTTGAAGACTCGCACCACAAGCCATGGACGGGTGGGC	11	-	6333777-6333826	11qA1	PREDICTED: Mus musculus H2A histone family, member V (H2afv), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208888	ILMN_208888	MUC1	NM_013605.1	NM_013605.1		17829	7305292	NM_013605.1	Muc1	NP_038633.1	ILMN_1250138	006270553	S	1674	GGCATTGCCCTGCTGGTGCTGGTCTGTATTTTGGTTGCTTTGGCTATCGT	3	+	89035741-89035790	3qF1	Mus musculus mucin 1, transmembrane (Muc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]			Muc-1; EMA; CD227	Muc-1; EMA; CD227
Mus musculus	RefSeq	ILMN_208888	ILMN_208888	MUC1	NM_013605.1	NM_013605.1		17829	7305292	NM_013605.1	Muc1	NP_038633.1	ILMN_2928489	002480241	S	1873	GTAGCCCCTATGAGGAGGTTTCGGCAGGTAATGGCAGTAGCAGTCTCTCT	3	+	89036021-89036037:89036946-89036978	3qF1	Mus musculus mucin 1, transmembrane (Muc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]			Muc-1; EMA; CD227	Muc-1; EMA; CD227
Mus musculus	RefSeq	ILMN_208888	ILMN_208888	MUC1	NM_013605.1	NM_013605.1		17829	7305292	NM_013605.1	Muc1	NP_038633.1	ILMN_1231229	003420079	S	1488	GGCTCCGTGGTGGTAGAATCGACTGTGGTTTTCCGGGAGGGTACTTTTAG	3	+	89035427-89035476	3qF1	Mus musculus mucin 1, transmembrane (Muc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]			Muc-1; EMA; CD227	Muc-1; EMA; CD227
Mus musculus	RefSeq	ILMN_208888	ILMN_208888	MUC1	NM_013605.1	NM_013605.1		17829	7305292	NM_013605.1	Muc1	NP_038633.1	ILMN_1259202	001260047	S	1084	CGGTGCTACCTACCAGTTCTGTGTTGGGCTCAGCTACCAGTCTAGTCTAT	3	+	89034790-89034839	3qF1	Mus musculus mucin 1, transmembrane (Muc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]			Muc-1; EMA; CD227	Muc-1; EMA; CD227
Mus musculus	RefSeq	ILMN_219350	ILMN_224531	ARV1	NM_026855.3	NM_026855.3		68865	146141194	NM_026855.3	Arv1	NP_081131.1	ILMN_2775050	006400746	S	945	CCCCAGAAGATCTGAACCACCTATACCAAGGCTGAACGCTCTCAGGCAGC				8qE2	Mus musculus ARV1 homolog (yeast) (Arv1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]		AW121084; 1110067L22Rik; AI461928	AW121084; 1110067L22Rik; AI461928
Mus musculus	Riken	ILMN_202293	ILMN_202293	4933405P16RIK	ri|4933405P16|PX00019F14|AK016678|1981					AK016678	4933405P16Rik		ILMN_1214562	006060224	S	1670	GGAATCCCAAGACGGTTTCATCACCTCAGGGAGAGCTTGGGTGTGGAGCT										
Mus musculus	RefSeq	ILMN_186130	ILMN_216959	MPRIP	NM_201245.2	NM_201245.2		26936	118130928	NM_201245.2	Mprip	NP_957697.1	ILMN_1224072	004050370	S	1385	CTCCACACCGAAGAGCCAAGTCATTGGACAGGAGGTCCACAGAATCCTCC	11	+	59555545-59555594	11qB1.3	Mus musculus myosin phosphatase Rho interacting protein (Mprip), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	9530046C02; RP23-180B18.4; MGC67316; p116Rip; AI647711; Rhoip3; RIP3; C76423; mKIAA0864	9530046C02; RP23-180B18.4; MGC67316; p116Rip; AI647711; Rhoip3; RIP3; C76423; mKIAA0864
Mus musculus	RefSeq	ILMN_186130	ILMN_216959	MPRIP	NM_201245.2	NM_201245.2		26936	118130928	NM_201245.2	Mprip	NP_957697.1	ILMN_1254067	001300674	S	3790	CACACAGCGGAGCACCACCCTTGATGGTCAGAGCAGAGCCACCGAATGTT	11	+	59589471-59589520	11qB1.3	Mus musculus myosin phosphatase Rho interacting protein (Mprip), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	9530046C02; RP23-180B18.4; MGC67316; p116Rip; AI647711; Rhoip3; RIP3; C76423; mKIAA0864	9530046C02; RP23-180B18.4; MGC67316; p116Rip; AI647711; Rhoip3; RIP3; C76423; mKIAA0864
Mus musculus	RefSeq	ILMN_237382	ILMN_237382	DNAJB6	NM_001037941.1	NM_001037941.1		23950	83816912	NM_001037941.1	Dnajb6	NP_001033030.1	ILMN_3107377	003170717	A	98	CCCTCCTCGCTGGCCGCCGTGTCCTCGGATTTATTCCAACAGTCAGTTAA	5	+	30066879-30066903:30079132-30079156	5qB1	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 6 (Dnajb6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Mrj; MGC102124; mDj4	Mrj; MGC102124; mDj4
Mus musculus	RefSeq	ILMN_230609	ILMN_230609	CPT2	NM_009949.1	NM_009949.1		12896	6753513	NM_009949.1	Cpt2	NP_034079.1	ILMN_2885532	002000450	S	1957	GACGCAATGCCCGAGAGTTTCTCCACTGTGTCCAGAAGTGCTTGGAAGAC	4	-	107576875-107576924	4qC7	Mus musculus carnitine palmitoyltransferase 2 (Cpt2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine [goid 4095] [evidence IEA]	CPTII; AI323697	CPTII; AI323697
Mus musculus	RefSeq	ILMN_239572	ILMN_239572	KRT10	NM_010660.2	NM_010660.2		16661	112983635	NM_010660.2	Krt10	NP_034790.2	ILMN_2849285	002070593	S	1830	GAGTCTCTTCATACGGGCCACTGGACAGACGTGTGGAAAACATAAATGTC	11	-	99246782-99246831	11qD	Mus musculus keratin 10 (Krt10), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	K1C1; K10; Krt1-10; D130054E02Rik; Krt-1.10	K1C1; K10; Krt1-10; D130054E02Rik; Krt-1.10
Mus musculus	RefSeq	ILMN_212907	ILMN_212907	SERF1	NM_011353.1	NM_011353.1		20365	6755469	NM_011353.1	Serf1	NP_035483.1	ILMN_2631518	002850523	S	391	GCTATTGCCAGTGGGTGCATCATACGCTCTAAGATTAAAATTTCACAGTG	13	+	100884019-100884068	13qD1	Mus musculus small EDRK-rich factor 1 (Serf1), mRNA.				4F5; Msmac1; m4F5	4F5; Msmac1; m4F5
Mus musculus	RefSeq	ILMN_212907	ILMN_212907	SERF1	NM_011353.1	NM_011353.1		20365	6755469	NM_011353.1	Serf1	NP_035483.1	ILMN_2747109	003520750	S	455	GTGTTATAACTTGTCCTTATAAAACTATTTTAAACTTTACTCTTCAGCCT	13	+	100884083-100884132	13qD1	Mus musculus small EDRK-rich factor 1 (Serf1), mRNA.				4F5; Msmac1; m4F5	4F5; Msmac1; m4F5
Mus musculus	Riken	ILMN_205561	ILMN_205561	6030458P06RIK	ri|6030458P06|PX00057J09|AK031605|2390					AK031605	6030458P06Rik		ILMN_1257704	000050372	S	434	AGTCACTTTCCATCGAGCGGCCTGACCTGACCGATTCCCAGGCTTCGCAA										
Mus musculus	RefSeq	ILMN_210989	ILMN_210989	PTP4A2	NM_008974.3	NM_008974.3		19244	56711341	NM_008974.3	Ptp4a2	NP_033000.1	ILMN_2611331	006180309	S	1100	CAGCCTTTGTTGCTGTAGATGTGCGTGTGTCTGGCAGCCTTAAGCCCACC	4	+	129525552-129525601	4qD2.2	Mus musculus protein tyrosine phosphatase 4a2 (Ptp4a2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	MGC102154; Prl-2; MGC103400	MGC102154; Prl-2; MGC103400
Mus musculus	RefSeq	ILMN_210989	ILMN_210989	PTP4A2	NM_008974.3	NM_008974.3		19244	56711341	NM_008974.3	Ptp4a2	NP_033000.1	ILMN_2647282	000160491	S	1312	GTGCCCCTGATCTACCATTAGGGTGTGAGAGGTAGCCAGGAACCTTTGGT	4	+	129525764-129525813	4qD2.2	Mus musculus protein tyrosine phosphatase 4a2 (Ptp4a2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	MGC102154; Prl-2; MGC103400	MGC102154; Prl-2; MGC103400
Mus musculus	RefSeq	ILMN_210989	ILMN_210989	PTP4A2	NM_008974.3	NM_008974.3		19244	56711341	NM_008974.3	Ptp4a2	NP_033000.1	ILMN_2725835	004540255	S	440	GCTAGTTGCGCTTGCATTGATTGAATGCGGAATGAAGTATGAAGATGCTG	4	+	129523718-129523767	4qD2.2	Mus musculus protein tyrosine phosphatase 4a2 (Ptp4a2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	MGC102154; Prl-2; MGC103400	MGC102154; Prl-2; MGC103400
Mus musculus	RefSeq	ILMN_197653	ILMN_324600	LOC100042627	XM_001478533.1	XM_001478533.1		100042627	149266741	XM_001478533.1	LOC100042627	XP_001478583.1	ILMN_1218545	002570709	S	699	ACAGAAAGAGCACCTTGTGACTTTGGCCCACGGCTCCCGTCACGGAGGTT	15	-	93541166-93541215	15qE3	PREDICTED: Mus musculus hypothetical protein LOC100042627 (LOC100042627), mRNA.					
Mus musculus	RefSeq	ILMN_192001	ILMN_239596	TTBK2	NM_001024856.2	NM_001024856.2		140810	114326516	NM_001024856.2	Ttbk2	NP_001020027.1	ILMN_1255889	003310014	S	10822	GAACAAGAGAAATAAGTCAATGTTCTGCTGTCCTCCTCTTAATGAGATGC	2	-	120558832-120558881	2qE5	Mus musculus tau tubulin kinase 2 (Ttbk2), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	Ttbk1; KIAA0847; 2610507N02Rik; TTK; AI326283; mKIAA0847; Ttbk; B930008N24Rik	Ttbk1; KIAA0847; 2610507N02Rik; TTK; AI326283; mKIAA0847; Ttbk; B930008N24Rik
Mus musculus	RefSeq	ILMN_191691	ILMN_239596	TTBK2	NM_001024856.2	NM_001024856.2		140810	114326516	NM_001024856.2	Ttbk2	NP_001020027.1	ILMN_2481309	001410471	S	1527	AAATACAGATGAAGTGTTTCCAGATGAACAGCTTAGTGATGGGGAGAACG	2	-	120581690-120581739	2qE5	Mus musculus tau tubulin kinase 2 (Ttbk2), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	Ttbk1; KIAA0847; 2610507N02Rik; TTK; AI326283; mKIAA0847; Ttbk; B930008N24Rik	Ttbk1; KIAA0847; 2610507N02Rik; TTK; AI326283; mKIAA0847; Ttbk; B930008N24Rik
Mus musculus	RefSeq	ILMN_211751	ILMN_211751	KCNA7	NM_010596.2	NM_010596.2		16495	128485673	NM_010596.2	Kcna7	NP_034726.2	ILMN_2619156	001990110	S	2778	GGCCCGTTGAACAAGTTTACTCAGGGTTATGCATTGTAGAGCTGGTAGTG	7	+	52666036-52666085	7qB4	Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 7 (Kcna7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Kv1.7	Kv1.7
Mus musculus	MEEBO	ILMN_193790	ILMN_193790	ADAMTS12	scl48076.25_607				29789428	NM_175501	Adamts12		ILMN_1234413	004250154	S	4	CTCCCTACCATTGCCCTCCAAAATAATGGTGTGACATCCATGGCTAACGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218018	ILMN_218018	TERF1	NM_009352.2	NM_009352.2		21749	31981960	NM_009352.2	Terf1	NP_033378.1	ILMN_1256480	004390397	S	1525	TTTATTTTTGTAAAATATAGATATGTTGAACCCTACCAAATTCAGTACCC	1	+	15833402-15833451	1qA3	Mus musculus telomeric repeat binding factor 1 (Terf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Trbf1; Trf1; Pin2	Trbf1; Trf1; Pin2
Mus musculus	RefSeq	ILMN_211389	ILMN_211389	SGOL1	NM_028232.1	NM_028232.1		72415	13386293	NM_028232.1	Sgol1	NP_082508.1	ILMN_1235414	002510102	S	884	GGAAGTTAAAGGAAGTAGATGTAGAGAAGTAACCGTAACCCTGCACAGAC	17	-	53818792-53818841	17qC	Mus musculus shugoshin-like 1 (S. pombe) (Sgol1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]; A cohesin complex that mediates sister chromatid cohesion during mitosis; has a subunit composition distinct from that of the meiotic cohesin complex [goid 30892] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle [goid 45132] [evidence IEA]		C81037; MGC113769; 3300001M08Rik; Sgo1	C81037; MGC113769; 3300001M08Rik; Sgo1
Mus musculus	RefSeq	ILMN_211389	ILMN_211389	SGOL1	NM_028232.1	NM_028232.1		72415	13386293	NM_028232.1	Sgol1	NP_082508.1	ILMN_2686509	000940427	S	2257	GTGTAAATAAAGGTGTGAATAAAGGGGCTTCTGGCTTTGATATGTGAACA	17	-	53815411-53815460	17qC	Mus musculus shugoshin-like 1 (S. pombe) (Sgol1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]; A cohesin complex that mediates sister chromatid cohesion during mitosis; has a subunit composition distinct from that of the meiotic cohesin complex [goid 30892] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle [goid 45132] [evidence IEA]		C81037; MGC113769; 3300001M08Rik; Sgo1	C81037; MGC113769; 3300001M08Rik; Sgo1
Mus musculus	RefSeq	ILMN_211389	ILMN_211389	SGOL1	NM_028232.1	NM_028232.1		72415	13386293	NM_028232.1	Sgol1	NP_082508.1	ILMN_2854968	003780110	S	1977	GCAGGAGAATTGCAGAGTACAAAACTTGCATCGTAGAAAACTTACATAGG	17	-	53815691-53815740	17qC	Mus musculus shugoshin-like 1 (S. pombe) (Sgol1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]; A cohesin complex that mediates sister chromatid cohesion during mitosis; has a subunit composition distinct from that of the meiotic cohesin complex [goid 30892] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle [goid 45132] [evidence IEA]		C81037; MGC113769; 3300001M08Rik; Sgo1	C81037; MGC113769; 3300001M08Rik; Sgo1
Mus musculus	RefSeq	ILMN_211389	ILMN_211389	SGOL1	NM_028232.1	NM_028232.1		72415	13386293	NM_028232.1	Sgol1	NP_082508.1	ILMN_2854962	001580626	S	1850	AGACAGTGCACAATGGGCAGAACCTCTACCAGGCTCTGATCAGGAGGGTC	17	-	53815818-53815867	17qC	Mus musculus shugoshin-like 1 (S. pombe) (Sgol1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]; A cohesin complex that mediates sister chromatid cohesion during mitosis; has a subunit composition distinct from that of the meiotic cohesin complex [goid 30892] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle [goid 45132] [evidence IEA]		C81037; MGC113769; 3300001M08Rik; Sgo1	C81037; MGC113769; 3300001M08Rik; Sgo1
Mus musculus	MEEBO	ILMN_195209	ILMN_195209	SPI15	scl0020711.1_71						Spi15		ILMN_2513501	003890487	S	20	GCATTTGTGCCTTTGCAGGTTATGTCTTAATGATGCCATATAGCCTTTGC										
Mus musculus	RefSeq	ILMN_216520	ILMN_316286	1700001G17RIK	XR_035294.1	XR_035294.1		67503	149233703	XR_035294.1	1700001G17Rik		ILMN_1251827	001400521	S	784	GGGCTGGGAGTGGTCGGGTTTAGAAATGCATAGTATATCCTAGTACTTTG				1qB	PREDICTED: Mus musculus RIKEN cDNA 1700001G17 gene (1700001G17Rik), misc RNA.					
Mus musculus	Riken	ILMN_201863	ILMN_201863	MATK	ri|6330416J22|PX00008J18|AK018182|1075					AK018182	Matk		ILMN_2545178	006510753	S	708	CTGCAGAGGAGGAGCTCGCCAAGGGTATGAGAGCCATACTGCAGAAGGGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]		
Mus musculus	RefSeq	ILMN_258497	ILMN_316416	B430319F04RIK	XR_035392.1	XR_035392.1		619306	149258014	XR_035392.1	B430319F04Rik		ILMN_3161055	005220575	S	2449	CTGCAAGAACAAGTACTCTTGACTGCTGAGCCATCTCTCCAGGACTCTGG				7qF1	PREDICTED: Mus musculus RIKEN cDNA B430319F04 gene (B430319F04Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_218803	ILMN_218803	GALNT11	NM_144908.3	NM_144908.3		231050	146149201	NM_144908.3	Galnt11	NP_659157.1	ILMN_2700400	004730255	S	2124	CAGGAGCGCCACTGGGATTTGGGTTTACTTCCGAGCTGCTGTTAAGGGAT				5qA3	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (Galnt11), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	A430075I06Rik; AI648252; E430002F06Rik	A430075I06Rik; AI648252; E430002F06Rik
Mus musculus	RefSeq	ILMN_215692	ILMN_215692	E2F2	NM_177733.2	NM_177733.2		242705	31343170	NM_177733.2	E2f2	NP_808401.1	ILMN_2836137	006550164	S	3226	GTCAGCTTCCTGGTGCCACAAACTTAGTCCTGTCCGAGGAGTGGTCAGCG	4	+	135466620-135466669	4qD3	Mus musculus E2F transcription factor 2 (E2f2), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	E130207A07	E130207A07
Mus musculus	RefSeq	ILMN_215692	ILMN_215692	E2F2	NM_177733.2	NM_177733.2		242705	31343170	NM_177733.2	E2f2	NP_808401.1	ILMN_2673776	000770162	S	3193	TGCCCATTTGGGTTAATTTGTCTTATCCTCGAGTCAGCTTCCTGGTGCCA	4	+	135466587-135466636	4qD3	Mus musculus E2F transcription factor 2 (E2f2), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	E130207A07	E130207A07
Mus musculus	RefSeq	ILMN_187963	ILMN_254575	AMPD3	NM_009667.2	NM_009667.2		11717	66792801	NM_009667.2	Ampd3	NP_033797.2	ILMN_1212698	000540446	S	1171	TGAAATGTCAGAGTTCAAGGAATTGAAGAGTAACCCCCACAGAGACTTTT	7	+	117939259-117939308	7qF1	Mus musculus adenosine monophosphate deaminase 3 (Ampd3), mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]; Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187963	ILMN_254575	AMPD3	NM_009667.2	NM_009667.2		11717	66792801	NM_009667.2	Ampd3	NP_033797.2	ILMN_2448651	001580730	S	3838	CTGTCCTGTGACTGTCATCCTTCCAGTTGTTGTGTAGCGTATGGAACCAT	7	+	117955663-117955712	7qF1	Mus musculus adenosine monophosphate deaminase 3 (Ampd3), mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]; Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188107	ILMN_188107	BXDC1	scl38032.11.1_165				31982661	NM_023323	Bxdc1		ILMN_1226709	006370725	S	15	TGGTTGTTTACTAAAGAGAATTGCTCTACTTGAGGCTGTTCGGTTTCCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215312	ILMN_246726	IL1RL1	NM_001025602.1	NM_001025602.1		17082	71037394	NM_001025602.1	Il1rl1	NP_001020773.1	ILMN_1243504	005340390	S	803	TCCTGTGGCAGATTAACAAAACAGTAGTTGGAAATTTTGGTGAAGCAAGA	1	+	40502995-40503044	1qB	Mus musculus interleukin 1 receptor-like 1 (Il1rl1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43124] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with interleukin-33 [goid 2113] [evidence IPI]; Combining with interleukin-33 to initiate a change in cell activity [goid 2114] [evidence IPI]	T1/ST2; Fit-1; St2-rs1; St2; Ly84; DER4; T1; ST2L	T1/ST2; Fit-1; St2-rs1; St2; Ly84; DER4; T1; ST2L
Mus musculus	RefSeq	ILMN_261972	ILMN_261972	FGL1	NM_145594.1	NM_145594.1		234199	21704195	NM_145594.1	Fgl1	NP_663569.1	ILMN_2897167	000130022	S	784	ACGACAACTACCAAGGAAACTGTGCTGAGGAAGAGCAGTCTGGCTGGTGG	8	-	42282319-42282368	8qA4	Mus musculus fibrinogen-like protein 1 (Fgl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	Mfire1; MGC37822	Mfire1; MGC37822
Mus musculus	RefSeq	ILMN_213446	ILMN_213446	PKP2	NM_026163.2	NM_026163.2		67451	142349260	NM_026163.2	Pkp2	NP_080439.1	ILMN_2637122	004230619	S	1846	GAGTACCCGAAACTATACCCAAGAGGCATCACTTGGGGCTCTCCAGAACC	16	+	16262762-16262811	16qA2	Mus musculus plakophilin 2 (Pkp2), mRNA.	A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IMP]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]		1200008D14Rik; AA516617; 1200012P04Rik	1200008D14Rik; AA516617; 1200012P04Rik
Mus musculus	RefSeq	ILMN_213446	ILMN_213446	PKP2	NM_026163.2	NM_026163.2		67451	142349260	NM_026163.2	Pkp2	NP_080439.1	ILMN_2665948	000940246	S	2290	CTCTGTCCTCCTTTACTCTCTGTGGGCACATACAGAGCTGCATCACGCCT	16	+	16269808-16269857	16qA2	Mus musculus plakophilin 2 (Pkp2), mRNA.	A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IMP]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]		1200008D14Rik; AA516617; 1200012P04Rik	1200008D14Rik; AA516617; 1200012P04Rik
Mus musculus	RefSeq	ILMN_185146	ILMN_185146	ZKSCAN6	NM_026107.2	NM_026107.2		52712	31981072	NM_026107.2	Zkscan6	NP_080383.2	ILMN_2520748	000070270	S	1848	AAGCATCAGAGATCACACTTGGGGAAGATGCCCTGCCCATAGCCACGTCC	11	+	65642287-65642328:65642329-65642336	11qB3	Mus musculus zinc finger with KRAB and SCAN domains 6 (Zkscan6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D11Ertd714e; KOX11; 1700128E15Rik; Zfp535	D11Ertd714e; KOX11; 1700128E15Rik; Zfp535
Mus musculus	RefSeq	ILMN_185146	ILMN_185146	ZKSCAN6	NM_026107.2	NM_026107.2		52712	31981072	NM_026107.2	Zkscan6	NP_080383.2	ILMN_2424555	004180647	S	2197	GGGAGGTAGGGTCGACTGTGAGTGCATGCCATCTTTGTCAGACTGGTGAC	11	+	65642636-65642685	11qB3	Mus musculus zinc finger with KRAB and SCAN domains 6 (Zkscan6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D11Ertd714e; KOX11; 1700128E15Rik; Zfp535	D11Ertd714e; KOX11; 1700128E15Rik; Zfp535
Mus musculus	RefSeq	ILMN_218810	ILMN_218810	OLFR110	NM_146328.1	NM_146328.1		258325	22129642	NM_146328.1	Olfr110	NP_666440.1	ILMN_1250690	006580577	S	815	GATTGATCTCAGTGCTGTATAGTGTTGTCACACCCATGCTGAATCCTGTA	17	+	37636412-37636461	17qB1	Mus musculus olfactory receptor 110 (Olfr110), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR249-2	MOR249-2
Mus musculus	RefSeq	ILMN_186921	ILMN_186921	TRAF3	NM_011632.2	NM_011632.2		22031	114842404	NM_011632.2	Traf3	NP_035762.2	ILMN_3144289	000270025	A	6616	CATGCCGTCTGTAGTAACCGCTCGCTGTGAGGCCCCATCTTGACAGTCCA	12	+	112505000-112505049	12qF1	Mus musculus Tnf receptor-associated factor 3 (Traf3), transcript variant 1, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD40bp; CAP-1; AI528849; amn; LAP1; CRAF1; T-BAM	CD40bp; CAP-1; AI528849; amn; LAP1; CRAF1; T-BAM
Mus musculus	RefSeq	ILMN_186921	ILMN_186921	TRAF3	NM_011632.2	NM_011632.2		22031	114842404	NM_011632.2	Traf3	NP_035762.2	ILMN_3066172	007160156	I	848	CCGAGTGTGTCAATGCCCCCAGCACCTGTAGTTTTAAGCGCTATGGCTGC	12	+	112489357-112489406	12qF1	Mus musculus Tnf receptor-associated factor 3 (Traf3), transcript variant 1, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD40bp; CAP-1; AI528849; amn; LAP1; CRAF1; T-BAM	CD40bp; CAP-1; AI528849; amn; LAP1; CRAF1; T-BAM
Mus musculus	RefSeq	ILMN_186921	ILMN_186921	TRAF3	NM_011632.2	NM_011632.2		22031	114842404	NM_011632.2	Traf3	NP_035762.2	ILMN_2439638	005420441	S	6612	GACACATGCCGTCTGTAGTAACCGCTCGCTGTGAGGCCCCATCTTGACAG	12	+	112504996-112505045	12qF1	Mus musculus Tnf receptor-associated factor 3 (Traf3), transcript variant 1, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD40bp; CAP-1; AI528849; amn; LAP1; CRAF1; T-BAM	CD40bp; CAP-1; AI528849; amn; LAP1; CRAF1; T-BAM
Mus musculus	Riken	ILMN_202414	ILMN_202414	1700021O21RIK	ri|1700021O21|ZX00037J13|AK006226|440					AK006226	1700021O21Rik		ILMN_2549439	001690221	S	96	ATGGCCCCCTGTTCTGCCAGTTGGGACGTTCTGACAGTGGATTCCTTCCC										
Mus musculus	RefSeq	ILMN_198419	ILMN_244423	GRIP2	XM_001000130.2	XM_001000130.2		243547	149255675	XM_001000130.2	Grip2	XP_001000130.2	ILMN_1236926	006650347	S	2919	GCACAAAGACCCGGTGAGGAACGACTTTGGTTTCAGCGTCTCAGATGGCC				6qD1	PREDICTED: Mus musculus glutamate receptor interacting protein 2 (Grip2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]		Interacting selectively with a glutamate receptor [goid 35254] [evidence ISO]		
Mus musculus	MEEBO	ILMN_221449	ILMN_221449	9030416H16RIK	scl071521.2_63	XM_358357.1			38081736	XM_358357.1	9030416H16Rik		ILMN_1220514	006220246	S	1658	TGGCAGAGAATATCAAGCTAACCAGAGACGCCCAGTCTCCCGATGAATCC										
Mus musculus	RefSeq	ILMN_218867	ILMN_218867	SLC6A14	NM_020049.3	NM_020049.3		56774	142362684	NM_020049.3	Slc6a14	NP_064433.2	ILMN_1248270	002350605	S	2197	GGGAAATGTACATGTCATGCTCAGTACATGATTGTAAGTACTTTTTTCAC	X	+	21318306-21318355	XqA2	Mus musculus solute carrier family 6 (neurotransmitter transporter), member 14 (Slc6a14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of amines, including polyamines, from one side of the membrane to the other. Amines are organic compounds that are weakly basic in character and contain an amino (-NH2) or substituted amino group [goid 5275] [evidence ISS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	CATB0plus; ATB0plus; 9030613J17Rik; 1110007A17Rik; MGC150294; MGC150295	CATB0plus; ATB0plus; 9030613J17Rik; 1110007A17Rik; MGC150294; MGC150295
Mus musculus	RefSeq	ILMN_189900	ILMN_231519	ZBTB8OS	NM_025970.3	NM_025970.3		67106	146149089	NM_025970.3	Zbtb8os	NP_080246.1	ILMN_2740159	004040253	S	565	CTTCCGTTTGAGAGGATGTGATGACTCATTTTCTATAGTATCTATGCTAA				4qD2.2	Mus musculus zinc finger and BTB domain containing 8 opposite strand (Zbtb8os), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Arch; 2010001H09Rik; Archm; 2310028N13Rik; AI851226; RP23-391E6.4	Arch; 2010001H09Rik; Archm; 2310028N13Rik; AI851226; RP23-391E6.4
Mus musculus	MEEBO	ILMN_186091	ILMN_186091	TRIB2	scl42611.4_130	NM_144551.3			31560871	NM_144551.3	Trib2		ILMN_2432550	000540753	S	16	CTCGGTGGGAGGAAAGATTGGAAACATGCATGATGGGGACTAATGGCCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	Riken	ILMN_205633	ILMN_205633	A230104G09RIK	ri|A230104G09|PX00063J23|AK039171|2829					AK039171	A230104G09Rik		ILMN_2574066	000060343	S	2430	GCTGGCACCCAGCCTCATAGAGCATCAAGCAAGGAAGAAGATGATACAGC										
Mus musculus	Riken	ILMN_201959	ILMN_201959	BOP1	ri|0710005A22|R000005E04|AK002984|276					AK002984	Bop1		ILMN_1258723	000380437	S	3	CTCGTGTCCGCAGGGGCTTGTAGATACGTTTGCCATCCAGGTCATAACCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IMP]; The formation of the constituents of the large ribosomal subunit, their assembly, and their transport to the sites of protein synthesis [goid 42273] [evidence IMP]	Interacting selectively with any complex of RNA and protein [goid 43021] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214835	ILMN_255463	DFNA5H	NM_018769.3	NM_018769.3		54722	146134502	NM_018769.3	Dfna5h	NP_061239.1	ILMN_2652482	006840435	S	1899	CCTTCAGACATGCTGTACACTACTGGGTGACTGGGAAACCAGAAATGCTA				6qB2.3	Mus musculus deafness, autosomal dominant 5 homolog (human) (Dfna5h), mRNA.				4932441K13Rik; 2310037D07Rik; DFNA5; Fin15	4932441K13Rik; 2310037D07Rik; DFNA5; Fin15
Mus musculus	RefSeq	ILMN_251477	ILMN_251477	GIMAP8	NM_212486.2	NM_212486.2		243374	56549089	NM_212486.2	Gimap8	NP_997651.1	ILMN_3088269	004010402	A	3135	GGCTCTGCTTGGAGGGTGGCACAGATGTTAGGTGAGGGTAAGATTCTGGT	6	+	48610361-48610410	6qB2.3	Mus musculus GTPase, IMAP family member 8 (Gimap8), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	IAN9; IMAP8; Gm457	IAN9; IMAP8; Gm457
Mus musculus	RefSeq	ILMN_214386	ILMN_256125	1700106J16RIK	XM_914729.2	XM_914729.2		74297	94390697	XM_914729.2	1700106J16Rik	XP_919822.1	ILMN_1213028	005390739	S	2788	ACATGTTGGTCAGGAGCCACAACCCGCTGCGAGCCATCAGGAAGAGCCAG				11qC	PREDICTED: Mus musculus RIKEN cDNA 1700106J16 gene (1700106J16Rik), mRNA.					
Mus musculus	MEEBO	ILMN_187956	ILMN_187956	A730017D01RIK	scl28224.2_30						A730017D01Rik		ILMN_2448591	003850113	S	6	CCTTCCCCCTTTCAGTATTACTGCCGTGCAAGGCACCAATAAAACAGCAA										
Mus musculus	RefSeq	ILMN_214452	ILMN_244807	4933403O08RIK	XM_909353.2	XM_909353.2		71030	94408061	XM_909353.2	4933403O08Rik	XP_914446.2	ILMN_2648155	000670400	S	2088	GGGCAGTGGTTTTGGAGTTTACATGGGCAATAGTGGTAGACCTTCTGGAC				XqE1	PREDICTED: Mus musculus RIKEN cDNA 4933403O08 gene (4933403O08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198151	ILMN_328913	LOC100044012	XM_001474916.1	XM_001474916.1		100044012	149269188	XM_001474916.1	LOC100044012	XP_001474966.1	ILMN_2530666	002230484	S	332	CCCCCCGTGGCTCCTGGATCCAGGAGTTGGCAGCTCTGGAGGTGAACTGG	17	-	34258874-34258901:34259288-34259309		PREDICTED: Mus musculus hypothetical protein LOC100044012 (LOC100044012), mRNA.					
Mus musculus	Riken	ILMN_204322	ILMN_204322	MAN1A	ri|4732479I16|PX00052I15|AK028996|3356					AK028996	Man1a		ILMN_2564090	001090332	S	2841	CCGTCAGGGCTCCCGAGGCCACATCTGTGAGCTTGCATATTATCTTTCCA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]		
Mus musculus	RefSeq	ILMN_234223	ILMN_234223	ITIH3	NM_008407.1	NM_008407.1		16426	6680495	NM_008407.1	Itih3	NP_032433.1	ILMN_2862623	001570301	S	2695	GGCCTGGGTGGCCTGGAAAAAGGACACAGAATGGGGCTTGTGGGAAAGAC	14	-	31721789-31721838	14qB	Mus musculus inter-alpha trypsin inhibitor, heavy chain 3 (Itih3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Intin3; AW108094; Itih-3	Intin3; AW108094; Itih-3
Mus musculus	RefSeq	ILMN_194854	ILMN_254778	STAT1	NM_009283.3	NM_009283.3		20846	114326481	NM_009283.3	Stat1	NP_033309.3	ILMN_2510233	003990452	S	4814	GTAGCACTTGGGATAAGCTGATCTAGGGACTTCCTGAGGCGGCAGAGCTT	1	+	52218355-52218404	1qC1.1	Mus musculus signal transducer and activator of transcription 1 (Stat1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AA408197; 2010005J02Rik	AA408197; 2010005J02Rik
Mus musculus	RefSeq	ILMN_194854	ILMN_254778	STAT1	NM_009283.3	NM_009283.3		20846	114326481	NM_009283.3	Stat1	NP_033309.3	ILMN_2593196	004260528	S	2517	CTGCTTCCCATGTCTCCAGAGGAGTTTGATGAGATGTCCCGGATAGTGGG	1	+	52212858-52212907	1qC1.1	Mus musculus signal transducer and activator of transcription 1 (Stat1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AA408197; 2010005J02Rik	AA408197; 2010005J02Rik
Mus musculus	RefSeq	ILMN_194854	ILMN_254778	STAT1	NM_009283.3	NM_009283.3		20846	114326481	NM_009283.3	Stat1	NP_033309.3	ILMN_2655721	000240725	S	3944	ACCCCGAGTGCAGGTGTGAACCACGGTAAGTGTGCACAGTCCTTAGGGAA	1	+	52217485-52217534	1qC1.1	Mus musculus signal transducer and activator of transcription 1 (Stat1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AA408197; 2010005J02Rik	AA408197; 2010005J02Rik
Mus musculus	RefSeq	ILMN_209413	ILMN_209413	CACNB2	NM_023116.3	NM_023116.3		12296	146134886	NM_023116.3	Cacnb2	NP_075605.1	ILMN_1217815	005820086	S	2755	ATGCCAAGTCAGCAGGTTTGCTTTATGAATCACAGGGACTAGAAATGCCC				2qA2	Mus musculus calcium channel, voltage-dependent, beta 2 subunit (Cacnb2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]	MGC129334; AW060387; Cchb2; MGC129335	MGC129334; AW060387; Cchb2; MGC129335
Mus musculus	RefSeq	ILMN_222820	ILMN_222820	KLRA2	NM_008462.4	NM_008462.4		16633	141803076	NM_008462.4	Klra2	NP_032488.3	ILMN_1251941	007050619	S	936	GTATTTGTGAAAAGAGATTGAATAAATTCCCTATTCCAGGGAGCTGTGCC	6	-	131170134-131170183	6qF3	Mus musculus killer cell lectin-like receptor, subfamily A, member 2 (Klra2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Klra30; Ly49b	Klra30; Ly49b
Mus musculus	RefSeq	ILMN_197584	ILMN_197584	LOC239281	XM_139265.2	XM_139265.2			38076694	XM_139265.2	LOC239281		ILMN_1219478	002260743	S	218	AGGGTCGCGTCCTGACACTCTCGGTGGACAGAGCACCTCAAGGGATACAT										
Mus musculus	RefSeq	ILMN_221731	ILMN_221731	OLFR693	NM_146453.1	NM_146453.1		258445	33238889	NM_146453.1	Olfr693	NP_666664.1	ILMN_2739637	000130528	S	763	CTCACAGTCATGTACATCCTGCCTAGTTCCTACCACAGTTCCAAACAAGA	7	-	113821186-113821235	7qE3	Mus musculus olfactory receptor 693 (Olfr693), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR283-8	MOR283-8
Mus musculus	Riken	ILMN_206690	ILMN_206690	SURF6	ri|1110028N13|ZA00008E11|AK075636|2026					AK075636	Surf6		ILMN_1233178	005080647	S	1861	GGGACCCAGAAAACCAGCCTCTATATCTTTGCCCAGTGATTGGCTTGTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure found in the nucleolus, which contains nearly completed preribosomal particles destined for the cytoplasm [goid 1652] [evidence IDA]	The aggregation, arrangement and bonding together of the mature ribosome and of its subunits [goid 42255] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]		
Mus musculus	Riken	ILMN_203394	ILMN_203394	6430544A07RIK	ri|6430544A07|PX00046H04|AK032428|3373					AK032428	6430544A07Rik		ILMN_1226155	005490273	S	3045	AGAGTTAGGTTTGCTGAAAGCCTATAATTTTCTCTAAGCTCAGTGCCTCC										
Mus musculus	MEEBO	ILMN_219400	ILMN_219400	A830048P05	scl0244670.1_64	NM_172917.1			27370409	NM_172917.1	A830048P05		ILMN_2708331	005390017	S	2826	ACGGAAAGACCGCCTGTCATAGGGGACCTTGCTTGTCCGCAGGGATGAAG										
Mus musculus	RefSeq	ILMN_186411	ILMN_247695	GABPB1	NM_207669.1	NM_207669.1		14391	46575941	NM_207669.1	Gabpb1	NP_997552.1	ILMN_2646381	000360626	S	868	GGTGCAATTCAGCAAGTAGTTAGCTCAGGGGGTCAGCAAGTCATCACGAT	2	-	126472393-126472442	2qF1	Mus musculus GA repeat binding protein, beta 1 (Gabpb1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		NRF2B2; Gabp beta1; GABPB; E4TF1-47; E4TF1; NRF2B1; GABPB1-1; E4TF1-53; BABPB2; E4Tf1B; GABPB1-2	NRF2B2; Gabp beta1; GABPB; E4TF1-47; E4TF1; NRF2B1; GABPB1-1; E4TF1-53; BABPB2; E4Tf1B; GABPB1-2
Mus musculus	RefSeq	ILMN_210249	ILMN_210249	BIRC5	NM_009689.2	NM_009689.2		11799	59859886	NM_009689.2	Birc5	NP_033819.1	ILMN_2632712	001240446	S	591	CACGCATCCCAGCTTTTCCAGCCAGGGCCTCCTAGCAGGATCTTAGAGAA	11	+	117716676-117716725	11qE2	Mus musculus baculoviral IAP repeat-containing 5 (Birc5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence RCA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA];  [goid 4869] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	survivin40; AAC-11; TIAP; Api4	survivin40; AAC-11; TIAP; Api4
Mus musculus	RefSeq	ILMN_210249	ILMN_210249	BIRC5	NM_009689.2	NM_009689.2		11799	59859886	NM_009689.2	Birc5	NP_033819.1	ILMN_2603699	002810612	S	223	CGAATGGCGGAGGCTGGCTTCATCCACTGCCCTACCGAGAACGAGCCTGA	11	+	117710773-117710775:117711068-117711114	11qE2	Mus musculus baculoviral IAP repeat-containing 5 (Birc5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence RCA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA];  [goid 4869] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	survivin40; AAC-11; TIAP; Api4	survivin40; AAC-11; TIAP; Api4
Mus musculus	RefSeq	ILMN_194001	ILMN_245234	GNAO1	NM_010308.3	NM_010308.3		14681	116325994	NM_010308.3	Gnao1	NP_034438.1	ILMN_2753422	002260327	S	2208	GCTCATCACCTATAGAAATCCAGCCCTATAGAAGCAATTCACCCAGCCCC	8	+	96492548-96492597	8qC5	Mus musculus guanine nucleotide binding protein, alpha O (Gnao1), transcript variant A, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IMP]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IMP]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gnao	Gnao
Mus musculus	RefSeq	ILMN_194001	ILMN_245234	GNAO1	NM_010308.3	NM_010308.3		14681	116325994	NM_010308.3	Gnao1	NP_034438.1	ILMN_2773191	004880369	S	1673	GTACCAAGCCCCTGTCTAACCTACGACCCCAGAGTGACTGACGGCTGTGT	8	+	96492013-96492062	8qC5	Mus musculus guanine nucleotide binding protein, alpha O (Gnao1), transcript variant A, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IMP]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IMP]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gnao	Gnao
Mus musculus	RefSeq	ILMN_201207	ILMN_201207	LOC385037	XM_358008.1	XM_358008.1			38089827	XM_358008.1	LOC385037		ILMN_2541472	000060725	S	486	GCTGAGAGATTTTGTCACCACCAGGCCTGCCCTAAAAGAGCTCCTGAAGG										
Mus musculus	RefSeq	ILMN_192095	ILMN_192095	TUBGCP5	NM_146190.2	NM_146190.2		233276	46560556	NM_146190.2	Tubgcp5	NP_666302.2	ILMN_2484958	007000554	S	2241	GGAGACACCATGTATGACTTCTATACTTCAATTTTTGATAAAATAAGAGA	7	+	63074133-63074182	7qB5	Mus musculus tubulin, gamma complex associated protein 5 (Tubgcp5), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]		B130010C12Rik; GCP5; mKIAA1899; MGC38608	B130010C12Rik; GCP5; mKIAA1899; MGC38608
Mus musculus	RefSeq	ILMN_192095	ILMN_192095	TUBGCP5	NM_146190.2	NM_146190.2		233276	46560556	NM_146190.2	Tubgcp5	NP_666302.2	ILMN_2928987	000520341	S	3433	CCTGGTGCTCAGAAGCAATAAAAGAACATCAGATACCCTGTAAGTTTTAC	7	+	63086569-63086618	7qB5	Mus musculus tubulin, gamma complex associated protein 5 (Tubgcp5), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]		B130010C12Rik; GCP5; mKIAA1899; MGC38608	B130010C12Rik; GCP5; mKIAA1899; MGC38608
Mus musculus	RefSeq	ILMN_192095	ILMN_192095	TUBGCP5	NM_146190.2	NM_146190.2		233276	46560556	NM_146190.2	Tubgcp5	NP_666302.2	ILMN_2486776	003420019	S	3477	TTTTACATTTCCTCTTACCTAAAAATTGTCTTAGATTTCACTATCCTGGA	7	+	63086613-63086662	7qB5	Mus musculus tubulin, gamma complex associated protein 5 (Tubgcp5), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]		B130010C12Rik; GCP5; mKIAA1899; MGC38608	B130010C12Rik; GCP5; mKIAA1899; MGC38608
Mus musculus	RefSeq	ILMN_190214	ILMN_190214	V1RA4	NM_053219.1	NM_053219.1		113846	16716524	NM_053219.1	V1ra4	NP_444449.1	ILMN_1241623	006420270	S	7	TGAGCACTGAAAAACATTTAGTTAACTTCTTTAGGTCCATGTGTGAGTGG	6	+	89971888-89971937	6qD1	Mus musculus vomeronasal 1 receptor, A4 (V1ra4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]	V1RA7	V1RA7
Mus musculus	RefSeq	ILMN_211799	ILMN_211799	CNOT7	NM_011135.4	NM_011135.4		18983	146134325	NM_011135.4	Cnot7	NP_035265.1	ILMN_2745540	005290121	S	2801	CTCCAGTTTTATGACAGCACCGCCTCCCTTGATCGGCTTCCTTTTACTCC				8qA4	Mus musculus CCR4-NOT transcription complex, subunit 7 (Cnot7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large multimeric transcription factor complex that can regulate transcription positively or negatively; consists of a core complex plus additional proteins; may interact with other proteins to control initiation of transcription. In Saccharomyces the core complex comprises Ccr4p, Caf1p, Not1p, Not2p, Not3p, Not4p, and Not5p; Caf4p, Caf16p, and several less well characterized proteins [goid 30014] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Pop2; Caf1; AU022737	Pop2; Caf1; AU022737
Mus musculus	RefSeq	ILMN_211799	ILMN_211799	CNOT7	NM_011135.4	NM_011135.4		18983	146134325	NM_011135.4	Cnot7	NP_035265.1	ILMN_2619657	004250520	S	2890	TATGATGTTCTTGATTTGTTAACTACACAAATCAATTTCATTAAAGTCCA				8qA4	Mus musculus CCR4-NOT transcription complex, subunit 7 (Cnot7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large multimeric transcription factor complex that can regulate transcription positively or negatively; consists of a core complex plus additional proteins; may interact with other proteins to control initiation of transcription. In Saccharomyces the core complex comprises Ccr4p, Caf1p, Not1p, Not2p, Not3p, Not4p, and Not5p; Caf4p, Caf16p, and several less well characterized proteins [goid 30014] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Pop2; Caf1; AU022737	Pop2; Caf1; AU022737
Mus musculus	RefSeq	ILMN_209660	ILMN_209660	KLHL17	NM_198305.1	NM_198305.1		231003	38142483	NM_198305.1	Klhl17	NP_938047.1	ILMN_2924601	004490014	S	2588	GGGTCTTCTATGGAGCTGGGCACACAACATGCACTTAGATCCTACACAGC	4	-	155603508-155603557	4qE2	Mus musculus kelch-like 17 (Drosophila) (Klhl17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	BC058738; AL022703	BC058738; AL022703
Mus musculus	RefSeq	ILMN_200727	ILMN_200727	LOC384513	XM_357682.1	XM_357682.1			38085590	XM_357682.1	LOC384513		ILMN_1230132	005870609	S	605	CTGCTGGTAAGTCACCTGTTCTGAACAAAGCCATAGATGGCCACAGTGGG										
Mus musculus	RefSeq	ILMN_200842	ILMN_240854	EG668360	XM_001001097.2	XM_001001097.2		668360	149271815	XM_001001097.2	EG668360	XP_001001097.2	ILMN_1220237	007000154	S	568	AGTAACAACACGTTCAACCAGGTCCCTGAAGTCTACACCCAGGGCCCAGT	X	+	100028970-100029019	XqD	PREDICTED: Mus musculus predicted gene, EG668360 (EG668360), mRNA.					
Mus musculus	RefSeq	ILMN_199890	ILMN_199890	LOC384044	XM_357384.1	XM_357384.1			38078715	XM_357384.1	LOC384044		ILMN_1227612	004860274	S	1713	GGCACATATAAAACGGTGCCCATCAAAATTCCAGCCAGCACCCGGCAGTC										
Mus musculus	MEEBO	ILMN_221346	ILMN_221346	E030024N20RIK	scl53316.1.1_226	NM_176911.2			31342370	NM_176911.2	E030024N20Rik		ILMN_1224281	003890168	S	1762	CTGACTTCACTGTGTGTTTAAGCCTTTATTTGTTGTGATTGGAAGGTGTC										
Mus musculus	RefSeq	ILMN_190636	ILMN_224598	C1GALT1	NM_052993.2	NM_052993.2		94192	40538829	NM_052993.2	C1galt1	NP_443719.2	ILMN_2742667	005870202	S	1760	CTAAAGATAATCAACCCGATACCAAGTCCCCATTGTCCCCTTTCCAAATG	6	+	7821846-7821895	6qA1	Mus musculus core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 (C1galt1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The stepwise addition of sugar residues to the initially added O-linked sugar (usually GalNAc) to form the core 1 O-glycan structure, Gal-beta-1->3-GalNAc [goid 16267] [evidence ISO]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence ISO]; Catalysis of the addition of a galactosyl residue to a non-reducing O-linked N-acetylgalactosamine residue in an O-glycan [goid 16263] [evidence IEA]	2210410E06Rik; T-synthase; AV284120	2210410E06Rik; T-synthase; AV284120
Mus musculus	MEEBO	ILMN_188251	ILMN_188251	DBN1	scl0003730.1_82				34328250	NM_019813	Dbn1		ILMN_2451077	006420102	S	7	TGTCCGTTCGGCCTCGGTCCGGCCCGCAGCATGGCCGGCGTCAGCTTCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188251	ILMN_188251	DBN1	scl0003730.1_82				34328250	NM_019813	Dbn1		ILMN_2736005	004610689	S	2128	TGCAGTGCCAGCATTAGCAGCAGCCCCGCCTGGCTCCCACTCTGGATTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200926	ILMN_200926	LOC385468	XM_358246.1	XM_358246.1			38087110	XM_358246.1	LOC385468		ILMN_1257021	007330554	S	246	TTACCTCATGGTTTATGGAAATGAGCCTCGCGGAGAGGCACTTGGGCTCC										
Mus musculus	Riken	ILMN_203301	ILMN_203301	PIK3C2A	ri|C530003F13|PX00080F16|AK049609|1711					AK049609	Pik3c2a		ILMN_1232743	004640189	S	1254	GCCCAGGGCCAAGTATCTCAGATTGAAGACCAAATTTCCATATACTGATC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IDA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate [goid 35005] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215372	ILMN_215372	LTC4S	NM_008521.1	NM_008521.1		17001	6678733	NM_008521.1	Ltc4s	NP_032547.1	ILMN_2658687	005390692	S	518	GGAGATCTTCGAACAAAACGCTGGGGTGCCCGCCCCCGAATCCCAGTTTT	11	-	50049994-50050043	11qB1.3	Mus musculus leukotriene C4 synthase (Ltc4s), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence ISO]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [evidence IEA]; Catalysis of the reaction: leukotriene C4 = leukotriene A4 + glutathione [goid 4464] [evidence IDA]; Catalysis of the reaction: leukotriene C4 = leukotriene A4 + glutathione [goid 4464] [evidence ISO]; Interacting selectively with a lipid [goid 8289] [evidence IDA]; Interacting selectively with a lipid [goid 8289] [evidence ISO]		
Mus musculus	RefSeq	ILMN_187343	ILMN_187343	TNFAIP3	NM_009397.2	NM_009397.2		21929	31543879	NM_009397.2	Tnfaip3	NP_033423.2	ILMN_1252202	000430523	S	4035	CCTAGCACCTGAAGATACTTGTGATGTCTAACTCTGCATAGCCTTTTCTC	10	-	18721010-18721059	10qA3	Mus musculus tumor necrosis factor, alpha-induced protein 3 (Tnfaip3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	A20; Tnfip3	A20; Tnfip3
Mus musculus	RefSeq	ILMN_222441	ILMN_259905	4921530D09RIK	XM_913680.3	XM_913680.3		77058	149249126	XM_913680.3	4921530D09Rik	XP_918773.3	ILMN_2749622	000840524	S	1542	GCGGGCGGAGATAAAGAAACAGGCCCAACAGCTGATCGAGGCGAAGCTCA				2qA3	PREDICTED: Mus musculus RIKEN cDNA 4921530D09 gene (4921530D09Rik), mRNA.					
Mus musculus	MEEBO	ILMN_216164	ILMN_216164	DNASE1L3	scl45915.9_517	NM_007870.2			31560709	NM_007870.2	Dnase1l3		ILMN_2667994	006520193	S	1846	ATGTGGCGCCATCTTGCTTGTATGCAGGGCACCCGTTTTTGTGCATTTCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187412	ILMN_187412	PCDHB13	scl52061.1_698				18087788	NM_053138	Pcdhb13		ILMN_1239577	004780176	S	2297	GCGAAAGGCAATTAATCCCCACTTTCCTTCTGTGCCCTCTGAGAGGAACA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220923	ILMN_220923	PRR18	NM_178774.3	NM_178774.3		320111	40254340	NM_178774.3	Prr18	NP_848889.2	ILMN_2728682	004670424	S	3308	CGGGGTCTCTACCTCGTTGCTGACATTCTGAGGACATTTTCTAGTCACTG	17	+	8536878-8536927	17qA1	Mus musculus proline rich region 18 (Prr18), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			9630019K15Rik	9630019K15Rik
Mus musculus	RefSeq	ILMN_218387	ILMN_230489	EG328314	XM_488691.3	XM_488691.3		328314	94395639	XM_488691.3	EG328314	XP_488691.2	ILMN_2695134	006770364	S	920	CTCCAGGCCTCAACGCATCATGGTTTTGTCTCGAGTCTGATAAATTCTGT	13	+	98353572-98353621	13qD1	PREDICTED: Mus musculus predicted gene, EG328314 (EG328314), mRNA.					
Mus musculus	Riken	ILMN_205731	ILMN_205731	LCP2	ri|A130068B11|PX00124P08|AK037970|2210					AK037970	Lcp2		ILMN_1216191	002350241	S	2152	GTGCACATCAGTCAGGTGAAAGCCCTGAACTTCATCTCTGGCCCCAAAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IMP]; The regulated release of cytokines from a cell or group of cells. Cytokines are any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 50663] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210463	ILMN_210463	TBPL1	NM_011603.4	NM_011603.4		237336	146134450	NM_011603.4	Tbpl1	NP_035733.1	ILMN_2605872	000460093	S	2024	CCAGGAGTGGCTTTACCTACCAATAAACTAGGTGGAGTCAAAACTTAGAT				10qA3	Mus musculus TATA box binding protein-like 1 (Tbpl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IDA]; The chemical reactions and pathways resulting in the formation of dTTP, deoxyribosylthymine triphosphate [goid 6235] [evidence IMP]; The formation of the acrosome from the spermatid Golgi [goid 1675] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Tlp; TRP; TRF2; AW491032; TLF; 4732475G08; AW011832; STD; D18347	Tlp; TRP; TRF2; AW491032; TLF; 4732475G08; AW011832; STD; D18347
Mus musculus	RefSeq	ILMN_200266	ILMN_310219	LOC100043402	XM_001479915.1	XM_001479915.1		100043402	149249994	XM_001479915.1	LOC100043402	XP_001479965.1	ILMN_1219230	005260431	S	3904	ACAAAACCAAGTTCACACAATATCTTTCCACGAATCCAGCCCTTCAAAGG	2	-	105787194-105787243	2qE3	PREDICTED: Mus musculus hypothetical protein LOC100043402 (LOC100043402), mRNA.					
Mus musculus	RefSeq	ILMN_218158	ILMN_218158	ADAMTSL5	NM_025629.2	NM_025629.2		66548	142374574	NM_025629.2	Adamtsl5	NP_079905.1	ILMN_2692399	006200044	S	901	GGAGCCAAGGCTCTTGTTGATTGGGCTTCCCCTGATTGGCCTCTGACAGA	10	-	79805522-79805552:79805553-79805571	10qC1	Mus musculus ADAMTS-like 5 (Adamtsl5), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC41037; Thsd6; 2010109H09Rik	MGC41037; Thsd6; 2010109H09Rik
Mus musculus	RefSeq	ILMN_216672	ILMN_216672	ITIH2	NM_010582.2	NM_010582.2		16425	141803557	NM_010582.2	Itih2	NP_034712.1	ILMN_2673879	004540450	S	2932	GGCCTTAATGGCTTATAGTTTTGGAAACTGTATGTGTATCCTTTTCTCCC	2	-	10016338-10016380:10016381-10016387	2qA1	Mus musculus inter-alpha trypsin inhibitor, heavy chain 2 (Itih2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Itih-2; AI747202; Intin2	Itih-2; AI747202; Intin2
Mus musculus	MEEBO	ILMN_187427	ILMN_187427	9130422G05RIK	scl24167.2_315				31542040	NM_025782	9130422G05Rik		ILMN_2633062	002450259	S	3008	AAGTGCACACCGCACCTTGTATGTCACAGCCCAGTGGTTCTTAGGTTCTG										
Mus musculus	RefSeq	ILMN_211310	ILMN_211310	MCAM	NM_023061.1	NM_023061.1		84004	12746443	NM_023061.1	Mcam	NP_075548.1	ILMN_2955919	003310491	S	2545	GAAGGCTACTGAGCCCAAGCTTCCCGCATTCCCTTAGTAACAAGAGACAG	9	+	43950475-43950524	9qA5.1	Mus musculus melanoma cell adhesion molecule (Mcam), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISO]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	s-endo; s-gicerin; Muc18; CD146; CD149; AV025631; 1-gicerin	s-endo; s-gicerin; Muc18; CD146; CD149; AV025631; 1-gicerin
Mus musculus	RefSeq	ILMN_211310	ILMN_211310	MCAM	NM_023061.1	NM_023061.1		84004	12746443	NM_023061.1	Mcam	NP_075548.1	ILMN_2614531	000940327	S	2671	GGGGCCAGGTCCTAGAGAGCCCAAGTGGGAGAATGGTATTTAGGAGATGA	9	+	43950601-43950650	9qA5.1	Mus musculus melanoma cell adhesion molecule (Mcam), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISO]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	s-endo; s-gicerin; Muc18; CD146; CD149; AV025631; 1-gicerin	s-endo; s-gicerin; Muc18; CD146; CD149; AV025631; 1-gicerin
Mus musculus	RefSeq	ILMN_211310	ILMN_211310	MCAM	NM_023061.1	NM_023061.1		84004	12746443	NM_023061.1	Mcam	NP_075548.1	ILMN_1229960	007160041	S	2671	GGGGGCCAGGTCCTAGAGAGCCCAAGTGGGAGAATGGTATTTAGGAGATG	9	+	43950601-43950650	9qA5.1	Mus musculus melanoma cell adhesion molecule (Mcam), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISO]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	s-endo; s-gicerin; Muc18; CD146; CD149; AV025631; 1-gicerin	s-endo; s-gicerin; Muc18; CD146; CD149; AV025631; 1-gicerin
Mus musculus	RefSeq	ILMN_193708	ILMN_241542	COL4A6	NM_053185.1	NM_053185.1		94216	16716478	NM_053185.1	Col4a6	NP_444415.1	ILMN_1252184	000150554	S	153	CCTGAATAAGGAACAAACTGCCAAGCATCAACGGAGCCCAGATGAGCCCG	X	-	137908417-137908466	XqF1-qF2	Mus musculus procollagen, type IV, alpha 6 (Col4a6), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]	BB116301	BB116301
Mus musculus	RefSeq	ILMN_193708	ILMN_241542	COL4A6	NM_053185.1	NM_053185.1		94216	16716478	NM_053185.1	Col4a6	NP_444415.1	ILMN_1254059	001170131	S	5893	GCCCATGCCCCATCTTGAGTAGGAAAGGCTGAAAGGCCAGTATTTGGTCC	X	-	137600651-137600700	XqF1-qF2	Mus musculus procollagen, type IV, alpha 6 (Col4a6), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]	BB116301	BB116301
Mus musculus	RefSeq	ILMN_241542	ILMN_241542	COL4A6	NM_053185.1	NM_053185.1		94216	16716478	NM_053185.1	Col4a6	NP_444415.1	ILMN_2854065	005050372	S	5570	TGGCTACCTTAGGAAGGTGTGCTAAGCTGTCACTTGCGACGATGGTAGAG	X	-	137600974-137601023	XqF1-qF2	Mus musculus procollagen, type IV, alpha 6 (Col4a6), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]	BB116301	BB116301
Mus musculus	RefSeq	ILMN_189922	ILMN_236995	V1RC21	NM_134176.1	NM_134176.1		171194	21717672	NM_134176.1	V1rc21	NP_598937.1	ILMN_1222122	003120288	S	643	ATCAGCCACCTGAGAGCCTCCCCTGAGAAAAGGGCTACCCAGACCATCGT	6	+	56907149-56907198	6qB3	Mus musculus vomeronasal 1 receptor, C21 (V1rc21), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	C230065D10Rik	C230065D10Rik
Mus musculus	RefSeq	ILMN_189922	ILMN_236995	V1RC21	NM_134176.1	NM_134176.1		171194	21717672	NM_134176.1	V1rc21	NP_598937.1	ILMN_2469469	000380669	S	513	CATCAGAGGATTGATTTTAACAATGACCATCTTAAGAGACGTGTTTCTTG	6	+	56907019-56907068	6qB3	Mus musculus vomeronasal 1 receptor, C21 (V1rc21), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	C230065D10Rik	C230065D10Rik
Mus musculus	RefSeq	ILMN_218359	ILMN_218359	2410076I21RIK	XM_134948.5	XM_134948.5		73673	94386142	XM_134948.5	2410076I21Rik	XP_134948.4	ILMN_2694782	001400414	S	680	GGGGAACAGAAGAATTGGGACCTTTTCTACGCTTATGTCTCATGGATCAA	9	-	58500814-58500863	9qB	PREDICTED: Mus musculus RIKEN cDNA 2410076I21 gene, transcript variant 1 (2410076I21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210504	ILMN_228783	C730007P19RIK	NM_009286.1	NM_009286.1		20865	6678158	NM_009286.1	C730007P19Rik	NP_033312.1	ILMN_1242564	006520768	S	829	AAGTTTTCCAGGAGAAAATGGCCGGATTCCCCCCAGGGATGTTCCCATGG	7	+	12673021-12673069:12673070-12673070		Mus musculus RIKEN cDNA C730007P19 gene (C730007P19Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC159068; Sth2; MGC159070; Sult2a2; mSTa2	MGC159068; Sth2; MGC159070; Sult2a2; mSTa2
Mus musculus	RefSeq	ILMN_212010	ILMN_212010	ARID2	NM_175251.2	NM_175251.2		77044	110624795	NM_175251.2	Arid2	NP_780460.2	ILMN_2621735	005420215	S	4993	CCTACCCCACTGACACAGTGGGGTCTCAAAGTCAAATACATTTCACATAC	15	+	96232531-96232580	15qF1	Mus musculus AT rich interactive domain 2 (ARID, RFX-like) (Arid2), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]	4432409D24Rik; zipzap/p200	4432409D24Rik; zipzap/p200
Mus musculus	RefSeq	ILMN_212010	ILMN_212010	ARID2	NM_175251.2	NM_175251.2		77044	110624795	NM_175251.2	Arid2	NP_780460.2	ILMN_2777804	005690411	S	5106	CTCCATGATGCTGAGAGGAAACTTCGTATTCTGATCTCTGAACGAATCCC	15	+	96232644-96232693	15qF1	Mus musculus AT rich interactive domain 2 (ARID, RFX-like) (Arid2), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]	4432409D24Rik; zipzap/p200	4432409D24Rik; zipzap/p200
Mus musculus	RefSeq	ILMN_212451	ILMN_241739	DENND3	NM_001081066.1	NM_001081066.1		105841	124486709	NM_001081066.1	Dennd3	NP_001074535.1	ILMN_1224129	006330575	S	5151	GGCCAGCGGCCAAGGGCACAGGTTCACACTGTCTTTGTAAAAGTCGACCA	15	+	73402524-73402573	15qD3	Mus musculus DENN/MADD domain containing 3 (Dennd3), mRNA.				E030003N15Rik; AI447457	E030003N15Rik; AI447457
Mus musculus	RefSeq	ILMN_223669	ILMN_223669	ANGPTL2	NM_011923.4	NM_011923.4		26360	141803564	NM_011923.4	Angptl2	NP_036053.2	ILMN_1254653	003400630	S	1978	GTGATGATGATTCGGCCCAACCCCAACACCTTCCACTAAGCTCTCCCTGC	2	+	33101768-33101806:33101807-33101817	2qB	Mus musculus angiopoietin-like 2 (Angptl2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	AI593246; Arp2; AW260363	AI593246; Arp2; AW260363
Mus musculus	MEEBO	ILMN_221751	ILMN_221751	METRN	scl070083.1_37				51317367	NM_133719	Metrn		ILMN_2739843	004640161	S	876	CTGGACTGAGAGACCTGGGAGCAAGCCCTGGATGGACCTTCTTCTGGAGA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_215150	ILMN_215150	BC010462	scl0001451.1_53	NM_145373.1			21703747	NM_145373.1	BC010462		ILMN_2656107	002120491	S	251	AACATCTCTAACACCTTCACCGATGTCACCATCCAGCTGTCTGCCAATGG										
Mus musculus	RefSeq	ILMN_212371	ILMN_212371	ESX1	NM_007957.1	NM_007957.1		13984	6679696	NM_007957.1	Esx1	NP_031983.1	ILMN_2625674	004390100	S	1586	GTAAACACTATCACGCATTACCTGTCAAGAAGCTGTTAAACGAAATGTAC	X	-	133649992-133650041	XqF1	Mus musculus extraembryonic, spermatogenesis, homeobox 1 (Esx1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Spx1	Spx1
Mus musculus	MEEBO	ILMN_186796	ILMN_186796	PEX1	scl071382.1_229						Pex1		ILMN_2438565	001770377	S	3	TTCCCAAGTCTGTATTAAATCCTTAATGATATTACGTCAATGGTGGACCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The microtubule-based process by which a peroxisome is transported to, and/or maintained in, a specific location. A peroxisome is a small membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 60152] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187420	ILMN_187420	2010110I21RIK	scl070260.1_10						2010110I21Rik		ILMN_2443980	004280634	S	6	CCTGGACTTCATGCTTAGATATATGTATAACAAGGTGAATAGTGTCTTTC										
Mus musculus	RefSeq	ILMN_243883	ILMN_243883	ATP5H	NM_027862.1	NM_027862.1		71679	21313678	NM_027862.1	Atp5h	NP_082138.1	ILMN_3004441	005560255	S	356	GGATCCCAGCTCAGGATCCAGGAGTATGAGAAGCAGCTGGAGAAAATGAG	11	-	115277179-115277193:115277329-115277363	11qE2	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d (Atp5h), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	0610009D10Rik	0610009D10Rik
Mus musculus	MEEBO	ILMN_190040	ILMN_190040	4930553M18RIK	scl37267.8_259				47059164	NM_026541	4930553M18Rik		ILMN_1254513	005690348	S	1	GGGCTGAATGAAAGTAGCCTTTCTGAACATCTATATTGGATAGGTCCACG										
Mus musculus	MEEBO	ILMN_190040	ILMN_190040	4930553M18RIK	scl37267.8_259				47059164	NM_026541	4930553M18Rik		ILMN_2726808	002650097	S	967	GCACTGGCACTTCCTTCATAAAGATTAGAGTTGTGAGTGTGAGGAATGGA										
Mus musculus	RefSeq	ILMN_195614	ILMN_259089	APC	NM_007462.2	NM_007462.2		11789	110225369	NM_007462.2	Apc	NP_031488.2	ILMN_2650013	001580402	S	355	CACTGAAGATGGAGAACTCAAATCTTCGACAAGAGCTAGAAGATAATTCC	18	+	34420720-34420769	18qB1	Mus musculus adenomatosis polyposis coli (Apc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence ISO]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; The establishment, maintenance and elaboration of a pattern along a line or a point [goid 9798] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IDA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]	AU020952; AW124434; Min; AI047805	AU020952; AW124434; Min; AI047805
Mus musculus	RefSeq	ILMN_214793	ILMN_214793	B230342M21RIK	NM_133898.3	NM_133898.3		100637	144922705	NM_133898.3	B230342M21Rik	NP_598659.2	ILMN_1224250	007160370	S	1602	GCCATGCCCACCTGGATGAGCAGTCTGGCTGTTGTATGTGGTGTTGAGAC	5	-	151374901-151374950	5qG3	Mus musculus RIKEN cDNA B230342M21 gene (B230342M21Rik), mRNA.				AI428195	AI428195
Mus musculus	RefSeq	ILMN_195355	ILMN_321951	C030034I22RIK	XM_001478807.1	XM_001478807.1		77533	149269409	XM_001478807.1	C030034I22Rik	XP_001478857.1	ILMN_1245711	003190392	S	862	CGACCGAATAGCACAGGTTCCCTTCACCGATATGAGCTCGGGTAGCATTC				17qE1.3	PREDICTED: Mus musculus RIKEN cDNA C030034I22 gene (C030034I22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201457	ILMN_244045	EG546250	XM_486530.3	XM_486530.3		546250	94397010	XM_486530.3	EG546250	XP_486530.3	ILMN_1237498	006280113	S	483	GTTGCTGAATGAGAACAGAAAGCTGCTGGTAGAGCAGGCTGACCAAGAGG	14	-	44913329-44913378	14qC1	PREDICTED: Mus musculus predicted gene, EG546250 (EG546250), mRNA.					
Mus musculus	MEEBO	ILMN_211949	ILMN_211949	4833431D13RIK	scl38801.3.1_98	XM_196000.3			38090505	XM_196000.3	4833431D13Rik		ILMN_1218640	000270561	S	888	GTGTGTCTCGGTGGATAGAATGCTCTCCCTACTGTGCTCAAGGCTTTGAC										
Mus musculus	RefSeq	ILMN_213935	ILMN_213935	NEUROD1	NM_010894.2	NM_010894.2		18012	142387581	NM_010894.2	Neurod1	NP_035024.1	ILMN_1228141	001500689	S	2423	CCTGTGTATTATGGTGTAATGCACAATTTAGAAAACTCCCATGCAGTTGC	2	-	79292819-79292868	2qC3	Mus musculus neurogenic differentiation 1 (Neurod1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48562] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Neurod; BETA2; BHF-1	Neurod; BETA2; BHF-1
Mus musculus	Riken	ILMN_205204	ILMN_205204	D030032G01RIK	ri|D030032G01|PX00179L07|AK050903|2816					AK050903	D030032G01Rik		ILMN_2570785	002360424	S	2554	CATTTCTCAGGACCAAAGATAGAAGGAGACGTGAAAGGGGGCCAGACCGG										
Mus musculus	RefSeq	ILMN_193911	ILMN_193911	GPN1	NM_133756.4	NM_133756.4		74254	146149305	NM_133756.4	Gpn1	NP_598517.1	ILMN_1219168	006110253	S	984	GACTCGAGGAACCTTGGATGAGGAGGATGAAGAAGCTGACAGTGACACGG				5qB1	Mus musculus GPN-loop GTPase 1 (Gpn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MBDIN; NTPBP; AI449615; 2410004J02Rik	MBDIN; NTPBP; AI449615; 2410004J02Rik
Mus musculus	RefSeq	ILMN_215423	ILMN_224363	CNOT1	XM_914270.2	XM_914270.2		234594	94384255	XM_914270.2	Cnot1	XP_919363.2	ILMN_2659323	000780438	S	1436	GTGGTTTATGGCATTCAAAGGGGTCTGGGCATGGAAGTGTTTCCAGTAGA				8qD1	PREDICTED: Mus musculus CCR4-NOT transcription complex, subunit 1, transcript variant 16 (Cnot1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_221681	ILMN_224363	CNOT1	XM_914270.2	XM_914270.2		234594	94384255	XM_914270.2	Cnot1	XP_919363.2	ILMN_1222249	007510731	S	6413	GCTTGGCTCGAATTGATTTCCCATCGGATCTTTATTGCAAGAATGCTGGC				8qD1	PREDICTED: Mus musculus CCR4-NOT transcription complex, subunit 1, transcript variant 16 (Cnot1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_204663	ILMN_224363	CNOT1	XM_914270.2	XM_914270.2		234594	94384255	XM_914270.2	Cnot1	XP_919363.2	ILMN_1259419	004010280	S	4006	TGTGGTGCCCTTTGTTGCCAAAGTTCTAGAGTCCAGCATTCGCAGCCTGG				8qD1	PREDICTED: Mus musculus CCR4-NOT transcription complex, subunit 1, transcript variant 16 (Cnot1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_185208	ILMN_224363	CNOT1	XM_914270.2	XM_914270.2		234594	94384255	XM_914270.2	Cnot1	XP_919363.2	ILMN_1217219	004040072	S	7276	CACCTTCATTGAGCTGATTAAAAACCCAGCATTTAAGTTCTGGAACCATG				8qD1	PREDICTED: Mus musculus CCR4-NOT transcription complex, subunit 1, transcript variant 16 (Cnot1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_207020	ILMN_312357	LOC100040041	XM_001473901.1	XM_001473901.1		100040041	149263485	XM_001473901.1	LOC100040041	XP_001473951.1	ILMN_2584445	001230521	S	287	CGCTCCACACCAGGGACACCGCCGTGATATTGGGCTGTCTTGAGGTTGAA	12	+	101123042-101123091	12qE	PREDICTED: Mus musculus hypothetical protein LOC100040041 (LOC100040041), mRNA.					
Mus musculus	RefSeq	ILMN_210089	ILMN_210089	ACRBP	NM_016845.1	NM_016845.1		54137	8392844	NM_016845.1	Acrbp	NP_058541.1	ILMN_2602125	002320017	S	316	CTTATGCTTCCTGGTTTGAGTCCTTCTGCCAGTTTGCTCAGTATCGTTGC	6	+	125000886-125000935	6qF2	Mus musculus proacrosin binding protein (Acrbp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence ISA]	The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence ISA]	OY-TES-1; sp32	OY-TES-1; sp32
Mus musculus	RefSeq	ILMN_210089	ILMN_210089	ACRBP	NM_016845.1	NM_016845.1		54137	8392844	NM_016845.1	Acrbp	NP_058541.1	ILMN_1217276	002470438	S	900	CGGTCTGCCCAGGAAATGGATGAAATGAATGAACTGTATGATGACTCCTG	6	+	125003900-125003949	6qF2	Mus musculus proacrosin binding protein (Acrbp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence ISA]	The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence ISA]	OY-TES-1; sp32	OY-TES-1; sp32
Mus musculus	RefSeq	ILMN_223670	ILMN_223670	SFPI1	NM_011355.1	NM_011355.1		20375	6755473	NM_011355.1	Sfpi1	NP_035485.1	ILMN_1235139	001740301	S	1009	GCCATAGCATTAACCCGTCGCCCGGCCCGGACACAGGGAGGACATTCCCA	2	+	90955589-90955638	2qE1	Mus musculus SFFV proviral integration 1 (Sfpi1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; The process whereby a relatively unspecialized precursor cell acquires specialized features of B cells, T cells, or natural killer cells [goid 30098] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process by which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils [goid 30851] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PU.1; Spi-1; Tfpu.1; Dis-1; Dis1; Sfpi-1; Tcfpu1	PU.1; Spi-1; Tfpu.1; Dis-1; Dis1; Sfpi-1; Tcfpu1
Mus musculus	RefSeq	ILMN_221954	ILMN_239401	PHRF1	NM_001081118.1	NM_001081118.1		101471	124487442	NM_001081118.1	Phrf1	NP_001074587.1	ILMN_2742583	000380326	S	5073	GGCCAACCTGGTGAAGGCCTATGTGGACAAATACAGGCATATGCGCAGAC	7	+	148448349-148448398	7qF5	Mus musculus PHD and ring finger domains 1 (Phrf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence ISO]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence ISO]		
Mus musculus	RefSeq	ILMN_239401	ILMN_239401	PHRF1	NM_001081118.1	NM_001081118.1		101471	124487442	NM_001081118.1	Phrf1	NP_001074587.1	ILMN_3136355	006420181	A	4979	GAGAAGTGACCAAGGAGGAGTACAAGGACATACTGCGCAAAGCCGTGCAG	7	+	148447751-148447800	7qF5	Mus musculus PHD and ring finger domains 1 (Phrf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence ISO]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence ISO]		
Mus musculus	RefSeq	ILMN_239401	ILMN_239401	PHRF1	NM_001081118.1	NM_001081118.1		101471	124487442	NM_001081118.1	Phrf1	NP_001074587.1	ILMN_3059135	005870541	I	4592	CAGAAGGGCTTCCAGCTGCTGGGACTCTGCACTCAGCAGGGGGTATTCTT	7	+	148447131-148447180	7qF5	Mus musculus PHD and ring finger domains 1 (Phrf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence ISO]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence ISO]		
Mus musculus	RefSeq	ILMN_219147	ILMN_236152	PLA1A	NM_134102.3	NM_134102.3		85031	141801864	NM_134102.3	Pla1a	NP_598863.2	ILMN_2722024	006330358	S	869	CCTGGAGGAACGCTTGGATGCTGGAGACGCCCTGTTTGTAGAAGCCATCC	16	-	38412186-38412235	16qB4	Mus musculus phospholipase A1 member A (Pla1a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Ps-pla1; Pspla1; AA986889	Ps-pla1; Pspla1; AA986889
Mus musculus	RefSeq	ILMN_214915	ILMN_214915	PSCD3	NM_011182.2	NM_011182.2		19159	31981543	NM_011182.2	Pscd3	NP_035312.2	ILMN_2791746	000940102	S	3281	GGAACCGTCTGGGGATGGGACTTACTGTGCTTCCTGTCATGCTGAGTTCA	5	+	143965499-143965548	5qG2	Mus musculus pleckstrin homology, Sec7 and coiled-coil domains 3 (Pscd3), mRNA.				AI648983; mKIAA4241; KIAA4241; Grp1	AI648983; mKIAA4241; KIAA4241; Grp1
Mus musculus	RefSeq	ILMN_224050	ILMN_248235	OLFR305	NM_146616.2	NM_146616.2		258609	112982874	NM_146616.2	Olfr305	NP_666827.2	ILMN_1227979	005690349	S	601	GGTGTTTGTCTAGGCATGTCTTGTTTTATCTGTGTTGTGATTTCCTACAT	7	-	93512195-93512244	7qD3	Mus musculus olfactory receptor 305 (Olfr305), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR219-2	MOR219-2
Mus musculus	RefSeq	ILMN_198505	ILMN_251502	PSG29	NM_054064.2	NM_054064.2		114872	142356091	NM_054064.2	Psg29	NP_473405.1	ILMN_1249265	004220411	S	1533	TACCAGTGTGTGGTCGTCAACCGAAATGGTGATGCAAAGGCCAGTCACCC	7	+	17797197-17797246	7qA2	Mus musculus pregnancy-specific glycoprotein 29 (Psg29), mRNA.				AA409969; cea17; AA102956; MGC107527	AA409969; cea17; AA102956; MGC107527
Mus musculus	RefSeq	ILMN_210276	ILMN_210276	PADI4	NM_011061.1	NM_011061.1		18602	6755017	NM_011061.1	Padi4	NP_035191.1	ILMN_2725484	000160187	S	791	GCAGACTTCAAAGGGCTCATTCCCCTCACCATCTCCCTGCTGGACAAGTC	4	-	140316446-140316477:140317516-140317533	4qD3	Mus musculus peptidyl arginine deiminase, type IV (Padi4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of peptidyl-arginine to form peptidyl-citrulline [goid 18101] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3 [goid 4668] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Pdi4	Pdi4
Mus musculus	MEEBO	ILMN_192223	ILMN_192223	BC003281	scl49186.10_30				48976071	NM_030253	BC003281		ILMN_2486102	006130682	S	4	CAGTGGAGTTGTGTGTGAAGCAGGGTAGGCATGCTGTGTGTATGCTGTCT										
Mus musculus	RefSeq	ILMN_216307	ILMN_227199	GPR64	NM_001079857.1	NM_001079857.1		237175	119943130	NM_001079857.1	Gpr64	NP_001073326.1	ILMN_2669589	006330669	S	2771	GCTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTATCCAGCTC	X	+	156930546-156930595	XqF4	Mus musculus G protein-coupled receptor 64 (Gpr64), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AW212196; Me6; B830041D06Rik	AW212196; Me6; B830041D06Rik
Mus musculus	RefSeq	ILMN_220977	ILMN_220977	H2-D4	NM_008200.1	NM_008200.1		14967	7110618	NM_008200.1	H2-D4	NP_032226.1	ILMN_2729386	005050451	S	440	TTCCAGTGGATGTCTGGCTGTGACCTCGGCTCCTCCGCGGGTACATGCAG	17	+	34951177-34951202:34988464-34988487		Mus musculus histocompatibility 2, D region locus 4 (H2-D4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	H-2D4	H-2D4
Mus musculus	MEEBO	ILMN_222209	ILMN_222209	2010204N08RIK	scl22072.25.1_0	XM_143332.3			38076573	XM_143332.3	2010204N08Rik		ILMN_2746320	004250025	S	5345	GGGAAAAGGAACAACCAGTATCAGTCAGGTTAATCTGACTTATGGTGGGA										
Mus musculus	RefSeq	ILMN_222341	ILMN_215069	PKMYT1	NM_023058.3	NM_023058.3		268930	142389041	NM_023058.3	Pkmyt1	NP_075545.2	ILMN_2748229	004280278	S	1996	TATTAGACACGGAAGTTTCAGGGGAGAGGTGGGCAAGACGGTCAGAGGTT	17	+	23873653-23873696	17qA3.3	Mus musculus protein kinase, membrane associated tyrosine/threonine 1 (Pkmyt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	6230424P17; Myt1; AW209059	6230424P17; Myt1; AW209059
Mus musculus	RefSeq	ILMN_215069	ILMN_215069	PKMYT1	NM_023058.3	NM_023058.3		268930	142389041	NM_023058.3	Pkmyt1	NP_075545.2	ILMN_1251921	003190343	S	1973	CCCCTGAAACTTCCGTGTCTAATAAAAAGTAATGCGTCTTGGGAACACCC	17	+	23873630-23873679	17qA3.3	Mus musculus protein kinase, membrane associated tyrosine/threonine 1 (Pkmyt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	6230424P17; Myt1; AW209059	6230424P17; Myt1; AW209059
Mus musculus	MEEBO	ILMN_217560	ILMN_217560	E2F3	scl0013557.1_74				51767596	XM_127250	E2f3		ILMN_1214485	000160671	S	4793	CGGGGTGCAGGCTTTTGTAAAAAAGGAAGTGTTTCTCCCAACACTGGGAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_247640	ILMN_247640	PPP2R2B	NM_027531.1	NM_027531.1		72930	67972401	NM_027531.1	Ppp2r2b	NP_081807.1	ILMN_3028493	007330242	I	139	CCGGCTTCTGGTTCCCACGCAAGTAAGCCTGCTGTCAATGGAGGAGGACA	18	-	43058455-43058468:43058469-43058504	18qB3	Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform (Ppp2r2b), transcript variant 1, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]	MGC113781; 6330404L05Rik; E130009M08Rik; PR55-BETA; PP2A-PR55B; SCA12; 2900026H06Rik	MGC113781; 6330404L05Rik; E130009M08Rik; PR55-BETA; PP2A-PR55B; SCA12; 2900026H06Rik
Mus musculus	RefSeq	ILMN_247640	ILMN_247640	PPP2R2B	NM_027531.1	NM_027531.1		72930	67972401	NM_027531.1	Ppp2r2b	NP_081807.1	ILMN_3101674	003460482	A	1490	CAAGACAAGGTTAACTAGAAGGACGAGCTACTACTTAGTCTCACATACTG	18	-	42805349-42805381:42805382-42805398	18qB3	Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform (Ppp2r2b), transcript variant 1, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]	MGC113781; 6330404L05Rik; E130009M08Rik; PR55-BETA; PP2A-PR55B; SCA12; 2900026H06Rik	MGC113781; 6330404L05Rik; E130009M08Rik; PR55-BETA; PP2A-PR55B; SCA12; 2900026H06Rik
Mus musculus	RefSeq	ILMN_217327	ILMN_244554	CRCT1	NM_028798.2	NM_028798.2		74175	141801668	NM_028798.2	Crct1	NP_083074.1	ILMN_2681913	005670554	S	525	CACTTTGATGTTCAGAAACTTCACCCTGTTCTTAGACCTGTCCTCTAACG	3	-	92818269-92818318	3qF1	Mus musculus cysteine-rich C-terminal 1 (Crct1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA589624; Nice-1; 2300002G24Rik	AA589624; Nice-1; 2300002G24Rik
Mus musculus	Riken	ILMN_206860	ILMN_206860	IL15	ri|D630025K20|PX00197O02|AK085441|2178					AK085441	Il15		ILMN_1219669	001710347	S	2050	GTGGCTAAGGCATGAAAGGAAACAGATAACAGATACCCCAAAAGCCGGCC						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of T cell selection that occurs in extrathymic locations, often resulting T cells of distinct specificities from those selected in the thymus [goid 45062] [evidence IMP]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IMP]; Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism [goid 50691] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IMP]; The expansion of a NK T cell population by cell division [goid 1866] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IMP];  [goid 5126] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216743	ILMN_216743	SNX11	NM_028965.3	NM_028965.3		74479	142357419	NM_028965.3	Snx11	NP_083241.1	ILMN_2674752	007050736	S	2164	GCGGGATTGTCAGTGGCATTTAGTTGAGAGTTGAGGGGCTTTGGCCTGAA	11	-	96629206-96629255	11qD	Mus musculus sorting nexin 11 (Snx11), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4933439F10Rik; AI117694; A930041K09Rik	4933439F10Rik; AI117694; A930041K09Rik
Mus musculus	MEEBO	ILMN_217962	ILMN_217962	LOC56304	scl0056304.1_278	NM_019633.1			9790002	NM_019633.1	LOC56304		ILMN_1226820	000670132	S	727	CTTACTTTTGCCAACAGGATTTTACGCTTCCGTTCACGTTCGGAGGGGGG										
Mus musculus	RefSeq	ILMN_224287	ILMN_252773	ROM1	NM_009073.3	NM_009073.3		19881	142374669	NM_009073.3	Rom1	NP_033099.2	ILMN_1238331	006280377	S	1340	AGGAGTTAAGAGCAAGCGGAGCTGGGCTGGAATGAGAAGTCCAGGTGTCC	19	-	9002008-9002057	19qA	Mus musculus rod outer segment membrane protein 1 (Rom1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rom-1; Tspan23	Rom-1; Tspan23
Mus musculus	RefSeq	ILMN_234613	ILMN_234613	2610507B11RIK	NM_001002004.1	NM_001002004.1		72503	50284698	NM_001002004.1	2610507B11Rik	NP_001002004.1	ILMN_3086201	004200674	A	4873	AGGCTGTGTCATTGTATCGGCTGCCAAAGCTCAGTTGCTGCAGTGCCAAC	11	+	78085507-78085556	11qB5	Mus musculus RIKEN cDNA 2610507B11 gene (2610507B11Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]	Catalysis of the reaction: (S)-malate + acceptor = oxaloacetate + reduced acceptor [goid 8924] [evidence IEA]	AU022687; D11Bhm178e; E1; D11Bhm179e; mKIAA0100; KIAA0100; RP23-185A18.9	AU022687; D11Bhm178e; E1; D11Bhm179e; mKIAA0100; KIAA0100; RP23-185A18.9
Mus musculus	RefSeq	ILMN_234613	ILMN_234613	2610507B11RIK	NM_001002004.1	NM_001002004.1		72503	50284698	NM_001002004.1	2610507B11Rik	NP_001002004.1	ILMN_3014965	001190095	I	7022	GACCCAGGGATTGTGTCCAAGCCTAGTATCCTGCTCTTTCGGGGCAACAG	11	+	78086705-78086754	11qB5	Mus musculus RIKEN cDNA 2610507B11 gene (2610507B11Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]	Catalysis of the reaction: (S)-malate + acceptor = oxaloacetate + reduced acceptor [goid 8924] [evidence IEA]	AU022687; D11Bhm178e; E1; D11Bhm179e; mKIAA0100; KIAA0100; RP23-185A18.9	AU022687; D11Bhm178e; E1; D11Bhm179e; mKIAA0100; KIAA0100; RP23-185A18.9
Mus musculus	RefSeq	ILMN_217147	ILMN_217147	ERAP1	NM_030711.4	NM_030711.4		80898	146149238	NM_030711.4	Erap1	NP_109636.1	ILMN_2679591	004610324	S	3717	GTCACTGATCCCTTAAGTAGGGAGTAGGGTTGTAAATTCCTAAATAACTC				13qC1	Mus musculus endoplasmic reticulum aminopeptidase 1 (Erap1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that activates or increases angiogenesis [goid 45766] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IDA]	PILSAP; ERAAP; PILSA	PILSAP; ERAAP; PILSA
Mus musculus	RefSeq	ILMN_217147	ILMN_217147	ERAP1	NM_030711.4	NM_030711.4		80898	146149238	NM_030711.4	Erap1	NP_109636.1	ILMN_1222158	004920047	S	2774	CCATTGAGACCATTGAAGAAAACATACGATGGATGGATAAGAATTTTGAT				13qC1	Mus musculus endoplasmic reticulum aminopeptidase 1 (Erap1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that activates or increases angiogenesis [goid 45766] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IDA]	PILSAP; ERAAP; PILSA	PILSAP; ERAAP; PILSA
Mus musculus	RefSeq	ILMN_223549	ILMN_223549	ISLR2	NM_177193.4	NM_177193.4		320563	66793431	NM_177193.4	Islr2	NP_796167.2	ILMN_2944610	000240025	S	3788	CGCCGAGCGTGGGCTATAGACTTCTGTGTCCGTAAAGTGTGCCGGTGTAG	9	-	58044389-58044438	9qB	Mus musculus immunoglobulin superfamily containing leucine-rich repeat 2 (Islr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	B930052A04Rik; mKIAA1465	B930052A04Rik; mKIAA1465
Mus musculus	RefSeq	ILMN_196729	ILMN_196729	HIST1H2AH	NM_175659.1	NM_175659.1		319168	30061326	NM_175659.1	Hist1h2ah	NP_783590.1	ILMN_2730329	001470341	S	9	ACGCGGTAAGCAGGGCGGCAAGGCTCGCGCCAAGGCCAAGACCCGCTCCT	13	-	22127363-22127412	13qA3.1	Mus musculus histone cluster 1, H2ah (Hist1h2ah), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	RP23-9O16.9	RP23-9O16.9
Mus musculus	RefSeq	ILMN_196729	ILMN_196729	HIST1H2AH	NM_175659.1	NM_175659.1		319168	30061326	NM_175659.1	Hist1h2ah	NP_783590.1	ILMN_1246108	000670739	S	1	ATGTCTGGACGCGGTAAGCAGGGCGGCAAGGCTCGCGCCAAGGCCAAGAC	13	-	22127371-22127420	13qA3.1	Mus musculus histone cluster 1, H2ah (Hist1h2ah), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	RP23-9O16.9	RP23-9O16.9
Mus musculus	RefSeq	ILMN_206024	ILMN_311927	ENSMUSG00000053640	XM_001471945.1	XM_001471945.1		791306	149233937	XM_001471945.1	ENSMUSG00000053640	XP_001471995.1	ILMN_1238613	002060711	S	1187	AAGCGCGAGACGAGCCAGCCTCCATCACAACATGGCTTTGACAAGTGGCC					PREDICTED: Mus musculus predicted gene, ENSMUSG00000053640 (ENSMUSG00000053640), mRNA.					
Mus musculus	RefSeq	ILMN_220481	ILMN_220481	PCDHGB6	NM_033578.3	NM_033578.3		93703	118130767	NM_033578.3	Pcdhgb6	NP_291056.1	ILMN_2722632	007320041	S	2497	TCTCCTGGGGCCTTAATTCCGCTTCACCTTGGAGATGATTTGACAACACA	18	+	37904244-37904293	18qB3	Mus musculus protocadherin gamma subfamily B, 6 (Pcdhgb6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211545	ILMN_211545	SEC16B	NM_033354.2	NM_033354.2		89867	40254125	NM_033354.2	Sec16b	NP_203505.2	ILMN_1254335	004050601	S	3977	CTGACATCTGGCTATCAAGTTAGATTGCTGTAGGCATCATATCGCCATGG	1	+	159498119-159498168	1qH1	Mus musculus SEC16 homolog B (S. cerevisiae) (Sec16b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rgpr-p117; Lztr2; Rgpr	Rgpr-p117; Lztr2; Rgpr
Mus musculus	RefSeq	ILMN_200783	ILMN_237425	EG628855	XM_893647.3	XM_893647.3		628855	149271058	XM_893647.3	EG628855	XP_898740.3	ILMN_1255192	001010128	S	224	CAGACACCTATGCCACTTACTCTGGGACCTTGGTGATTATGGGAATGGGC	X	+	18498045-18498094	XqA1.3	PREDICTED: Mus musculus predicted gene, EG628855 (EG628855), mRNA.					
Mus musculus	Riken	ILMN_204419	ILMN_204419	A230069J08RIK	ri|A230069J08|PX00129O24|AK038866|2161					AK038866	A230069J08Rik		ILMN_1257843	006420228	S	1872	CATTAGTACCAGACACCTGGCCCCATCATCTAGGGAGAGACCCCTGAGGC										
Mus musculus	RefSeq	ILMN_220392	ILMN_220392	CSRP2	NM_007792.3	NM_007792.3		13008	142359742	NM_007792.3	Csrp2	NP_031818.2	ILMN_2721439	007150278	S	791	GACAGCGCTGCACTCTCCCGCCCACTCACTAGCGTCTAAGAGCATTCTTT	10	+	110376475-110376524	10qD1	Mus musculus cysteine and glycine-rich protein 2 (Csrp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW551867; SmLim; Crp2	AW551867; SmLim; Crp2
Mus musculus	RefSeq	ILMN_214288	ILMN_214288	GGA1	NM_145929.1	NM_145929.1		106039	22122346	NM_145929.1	Gga1	NP_666041.1	ILMN_2894943	001050008	S	2755	CTGTGGTCACAGAGCTGAAGGAGCTCTCCACTCAGCCCCCGGGGCCTCCA	15	+	78724736-78724785	15qE1	Mus musculus golgi associated, gamma adaptin ear containing, ARF binding protein 1 (Gga1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU016030; AW209092; 4930406E12Rik	AU016030; AW209092; 4930406E12Rik
Mus musculus	RefSeq	ILMN_214288	ILMN_214288	GGA1	NM_145929.1	NM_145929.1		106039	22122346	NM_145929.1	Gga1	NP_666041.1	ILMN_1248850	004640379	S	2743	TTTGGAATGGCCCTGTGGTCACAGAGCTGAAGGAGCTCTCCACTCAGCCC	15	+	78724724-78724773	15qE1	Mus musculus golgi associated, gamma adaptin ear containing, ARF binding protein 1 (Gga1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU016030; AW209092; 4930406E12Rik	AU016030; AW209092; 4930406E12Rik
Mus musculus	RefSeq	ILMN_214288	ILMN_214288	GGA1	NM_145929.1	NM_145929.1		106039	22122346	NM_145929.1	Gga1	NP_666041.1	ILMN_2717744	000460477	S	1834	ACCTCAGGCCACACCCACTGAGTTCTCCCTAACCAGCATCACTGTGCCCC	15	+	78723003-78723052	15qE1	Mus musculus golgi associated, gamma adaptin ear containing, ARF binding protein 1 (Gga1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU016030; AW209092; 4930406E12Rik	AU016030; AW209092; 4930406E12Rik
Mus musculus	RefSeq	ILMN_235875	ILMN_235875	LDB3	NM_001039075.2	NM_001039075.2		24131	122056489	NM_001039075.2	Ldb3	NP_001034164.1	ILMN_3136283	005360102	A	345	CTACAGAAGTCCAAGCGGCCTATTCCCATCTCCACGACAGCGCCTCCCAT	14	-	35391814-35391856:35392362-35392368	14qB	Mus musculus LIM domain binding 3 (Ldb3), transcript variant 6, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with protein kinase C [goid 5080] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271
Mus musculus	MEEBO	ILMN_188842	ILMN_188842	5330403D14RIK	scl16838.2_356						5330403D14Rik		ILMN_2456216	002370465	S	5	GCGACAGAGCCTCTGCACGGAGAGCAGGCATGCTTTATAGCACCAGATCA										
Mus musculus	RefSeq	ILMN_210132	ILMN_210132	RNF185	NM_145355.2	NM_145355.2		193670	31981756	NM_145355.2	Rnf185	NP_663330.2	ILMN_2957036	000060056	S	2628	CTGCCAGCAGCTGAGGCTAGACAGCCAACTTGGACTTTATGGGCCATTCC	11	-	3316175-3316224	11qA1	Mus musculus ring finger protein 185 (Rnf185), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700022N24Rik; AL033296; MGC19394	1700022N24Rik; AL033296; MGC19394
Mus musculus	RefSeq	ILMN_213138	ILMN_213138	CAB39L	NM_026908.3	NM_026908.3		69008	142378328	NM_026908.3	Cab39l	NP_081184.3	ILMN_1217943	004250670	S	2775	GGGTTTGAATTGGCTCTTTGCCAGCATCCTTTTATCCTAGCTGTGTACTT	14	+	60167478-60167527	14qC3-qD1	Mus musculus calcium binding protein 39-like (Cab39l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930520C08Rik; MO2L; 1500031K13Rik; AA589432; 2810425O13Rik	4930520C08Rik; MO2L; 1500031K13Rik; AA589432; 2810425O13Rik
Mus musculus	MEEBO	ILMN_208614	ILMN_208614	TAF7	scl0024074.2_26						Taf7		ILMN_2626060	006860561	S	1409	TGGTGGTGGGTTTTCATTCTTAAGAAAATAGGATTACATAGACAGGTTTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence IDA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]		
Mus musculus	MEEBO	ILMN_192603	ILMN_192603	2310016E02RIK	scl26747.2_127				21313563	NM_024460	2310016E02Rik		ILMN_1254063	007560707	S	1	GTCAGCTAGCCAGTGTCTCGAGACTAATTAGAAGTTATGCTTTGAAGTGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200010	ILMN_200010	LOC383096	XM_356870.1	XM_356870.1			38079843	XM_356870.1	LOC383096		ILMN_1259241	002810332	S	603	CCTCAGATTGACTGAGACAGGATTAACATGTGGCACAAACACCAACAGCG										
Mus musculus	Riken	ILMN_204544	ILMN_204544	B230371N03RIK	ri|B230371N03|PX00161L21|AK046333|1605					AK046333	B230371N03Rik		ILMN_2565791	004540035	S	1539	GGAGCTCAGTGGTAGAGTGTTTGTTTGCCTTGCATGCAGAAGGCCTTAGC										
Mus musculus	RefSeq	ILMN_196598	ILMN_196598	FAM100B	NM_176902.3	NM_176902.3		319370	114326476	NM_176902.3	Fam100b	NP_795876.1	ILMN_1247665	000380010	S	607	CCAACACCTTCCATCTCCACTGCCCACAGCCCACGTGGCCCCCCGGAGCA	11	+	116299516-116299565	11qE2	Mus musculus family with sequence similarity 100, member B (Fam100b), mRNA.				RP23-184G6.6; D030012E24Rik	RP23-184G6.6; D030012E24Rik
Mus musculus	RefSeq	ILMN_217105	ILMN_217105	VSTM2B	NM_021387.3	NM_021387.3		58188	146135042	NM_021387.3	Vstm2b	NP_067362.1	ILMN_1251276	004040674	S	1187	CCCTCTGAATCTTCATTTTGCACGAACTCTTGAGCAAGTCCCTTGAGGAT				7qB3	Mus musculus V-set and transmembrane domain containing 2B (Vstm2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AB030198	AB030198
Mus musculus	RefSeq	ILMN_217128	ILMN_251302	C430048L16RIK	NM_198957.2	NM_198957.2		77604	90186271	NM_198957.2	C430048L16Rik	NP_945195.1	ILMN_2679390	004480440	S	3062	CATTCTGTTTTTGAAAGGGGAGATTCCTGAATTCATTCGGTTCATTGATG	4	+	12023054-12023103	4qA1	Mus musculus RIKEN cDNA C430048L16 gene (C430048L16Rik), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	RP23-203A12.6; AV299215; MGC91091	RP23-203A12.6; AV299215; MGC91091
Mus musculus	MEEBO	ILMN_193400	ILMN_193400	SCL0001226.1_4	scl0001226.1_4	U17869.1			691719	U17869.1	scl0001226.1_4		ILMN_2496808	004120349	S	2	GCTCCAGCGGGCTTGCATGATCAGAAGAAAGGGAAGTTTGCTTGGTTTAG										
Mus musculus	MEEBO	ILMN_194323	ILMN_194323	4921513D23RIK	scl48737.1.522_30						4921513D23Rik		ILMN_2505392	000870288	S	16	CCTTTCCATCTTCCCATCTTATACTGTTTGCTTTTGATGAGGCTTGGGGG						A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185442	ILMN_185442	ZNRD1	NM_023162.4	NM_023162.4		66136	142378639	NM_023162.4	Znrd1	NP_075651.1	ILMN_1247048	002710240	S	549	TCCTTCTCTCGGAAGTGAAGATACTCGTCTTTGATGCCTCCTTGGTCCCC	17	-	37140076-37140125	17qB1	Mus musculus zinc ribbon domain containing, 1 (Znrd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1110014N07Rik; Rpa12	1110014N07Rik; Rpa12
Mus musculus	MEEBO	ILMN_211915	ILMN_211915	THRA	scl000082.1_54_REVCOMP	XM_126580.1			20913042	XM_126580.1	Thra		ILMN_2725595	002350504	S	1475	ACTACGTCAACCACCGCAAACACAACATTCCGCACTTCTGGCCCAAGCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Combining with thyroid hormone to initiate a change in cell activity [goid 4887] [evidence TAS]		
Mus musculus	RefSeq	ILMN_221642	ILMN_221642	OLFR1156	NM_146817.2	NM_146817.2		258814	124286813	NM_146817.2	Olfr1156	NP_667028.2	ILMN_2738305	000010487	S	603	CTGATGTTAGTACAAATGAGTTTTTCCTGTTCATCATTGTCAATTTCAAT	2	-	87789770-87789819	2qD	Mus musculus olfactory receptor 1156 (Olfr1156), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR174-3	MOR174-3
Mus musculus	Riken	ILMN_202904	ILMN_202904	1810047J07RIK	ri|6430628B13|PX00048I16|AK032595|2201					AK032595	1810047J07Rik		ILMN_1226013	001690747	S	1876	TAAATTAGGCTCTTGGGGAGCTCTGCTAACTCTTCGAGCTACTCGGAGGC										
Mus musculus	RefSeq	ILMN_213552	ILMN_236655	DNMT3B	NM_001003963.2	NM_001003963.2		13436	141803432	NM_001003963.2	Dnmt3b	NP_001003963.1	ILMN_1252310	001470044	S	3977	CTCGCAAGGTGTGGGCTTTTGTAACTTCACAGGTGTGGGGAGAGACTGCC	2	+	153513313-153513362	2qH1	Mus musculus DNA methyltransferase 3B (Dnmt3b), transcript variant 4, mRNA.	A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IGI]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence IDA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IMP]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IGI]; Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IGI]	Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence ISO]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IGI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC124407	MGC124407
Mus musculus	RefSeq	ILMN_198722	ILMN_257171	LOC667084	XR_001970.1	XR_001970.1		667084	94380880	XR_001970.1	LOC667084		ILMN_1224592	006280193	S	1169	TGCAGCATCTAAGCATGATGCTGTGCCATCTAAGATCAGCACGCTGGCAC	7	-	100071213-100071262		PREDICTED: Mus musculus similar to G2/mitotic-specific cyclin-B1 (LOC667084), mRNA.					
Mus musculus	RefSeq	ILMN_191341	ILMN_191341	V1RC22	NM_134177.1	NM_134177.1		171195	21717682	NM_134177.1	V1rc22	NP_598938.1	ILMN_2587700	006510372	I	837	ACAAATCAGTTCTGATAAGAGAGTAATCAACGTGTTGAAAAACTCACAAT	6	-	58384953-58385002	6qB3	Mus musculus vomeronasal 1 receptor, C22 (V1rc22), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	V1rc9	V1rc9
Mus musculus	RefSeq	ILMN_191341	ILMN_191341	V1RC22	NM_134177.1	NM_134177.1		171195	21717682	NM_134177.1	V1rc22	NP_598938.1	ILMN_2484864	003890246	S	378	TGTTTTATATATTTGGTTTTTTAATTTCTTGGCCAATAGTCACATGATAT	6	-	58385412-58385461	6qB3	Mus musculus vomeronasal 1 receptor, C22 (V1rc22), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	V1rc9	V1rc9
Mus musculus	RefSeq	ILMN_191341	ILMN_191341	V1RC22	NM_134177.1	NM_134177.1		171195	21717682	NM_134177.1	V1rc22	NP_598938.1	ILMN_2899010	006220224	S	772	GACCCAGTCATCCTGACTGTTCAGAAGCTTGTAGTGACTGCCTATCCCAC	6	-	58385018-58385067	6qB3	Mus musculus vomeronasal 1 receptor, C22 (V1rc22), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	V1rc9	V1rc9
Mus musculus	RefSeq	ILMN_191341	ILMN_191341	V1RC22	NM_134177.1	NM_134177.1		171195	21717682	NM_134177.1	V1rc22	NP_598938.1	ILMN_2899011	005270390	S	651	CCTGAGAGTGTCCCCTGAGAAAAGGGCCACCCAGACCATCTTACTACTTG	6	-	58385139-58385188	6qB3	Mus musculus vomeronasal 1 receptor, C22 (V1rc22), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	V1rc9	V1rc9
Mus musculus	RefSeq	ILMN_211186	ILMN_211186	SCYE1	NM_007926.2	NM_007926.2		13722	126012516	NM_007926.2	Scye1	NP_031952.2	ILMN_2613399	002810543	S	565	GCGTCTGGATCTTCGAATTGGTTGTATTGTTACTGCCAAGAAGCACCCTG	3	-	132335037-132335086	3qG3	Mus musculus small inducible cytokine subfamily E, member 1 (Scye1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IDA]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	p43; AIMP1; EMAPII; 9830137A06Rik; Emap2	p43; AIMP1; EMAPII; 9830137A06Rik; Emap2
Mus musculus	RefSeq	ILMN_190953	ILMN_223112	ST3GAL2	NM_178048.3	NM_178048.3		20444	142348044	NM_178048.3	St3gal2	NP_835149.1	ILMN_1235722	006330685	S	1873	CCTTCGAGTGGACAAAGAGAAGGTCCAGATTTACAACCCAGCCTTCTTCA	8	+	113493109-113493133:113493444-113493468	8qE1	Mus musculus ST3 beta-galactoside alpha-2,3-sialyltransferase 2 (St3gal2), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]	AI429591; ST3GalII; Siat5; AW822065	AI429591; ST3GalII; Siat5; AW822065
Mus musculus	RefSeq	ILMN_223112	ILMN_223112	ST3GAL2	NM_178048.3	NM_178048.3		20444	142348044	NM_178048.3	St3gal2	NP_835149.1	ILMN_1256849	005340056	S	3303	AATATTTCCCATTCTTAATGAGTTCACATTACCAAGCAGCCTGGTTGGGG	8	+	113495287-113495336	8qE1	Mus musculus ST3 beta-galactoside alpha-2,3-sialyltransferase 2 (St3gal2), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]	AI429591; ST3GalII; Siat5; AW822065	AI429591; ST3GalII; Siat5; AW822065
Mus musculus	RefSeq	ILMN_199595	ILMN_199595	LOC383710	XM_357199.1	XM_357199.1			38074850	XM_357199.1	LOC383710		ILMN_1218354	002190477	S	963	AGGTTGTGCAACACACAGGCCACAGGTTTCAGATGGAGAGGTGCTGGGGC										
Mus musculus	MEEBO	ILMN_185162	ILMN_185162	SCL0003399.1_126	scl0003399.1_126	AK033597.1			26083479	AK033597.1	scl0003399.1_126		ILMN_2424697	001070092	S	14	TGCCGGTCACCCGATCCACCCTGTAGCCCTGCAAACTTTATGGTATTCGG										
Mus musculus	RefSeq	ILMN_214972	ILMN_214972	OLFR411	NM_146709.1	NM_146709.1		258704	22129420	NM_146709.1	Olfr411	NP_666920.1	ILMN_2654085	001740551	S	607	TTTGGTCTGGGTGTCCTCATGGCTGGTGCACCTGTGATTCTCATTGTCAC	11	-	74160428-74160477	11qB5	Mus musculus olfactory receptor 411 (Olfr411), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-20M18.13; MOR255-3	RP23-20M18.13; MOR255-3
Mus musculus	MEEBO	ILMN_188799	ILMN_188799	GRAP2	scl47719.2.1_93				6754721	NM_010815	Grap2		ILMN_2701424	006130315	S	2639	GAGGAGGGACTGGAGGGCATCTGTTACTGAGGGAGACAAAAGAACAGTCT								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_188799	ILMN_188799	GRAP2	scl47719.2.1_93				6754721	NM_010815	Grap2		ILMN_2711241	006040180	S	964	CTGCGGCCTTGGAAGTGAGGTGAACGCCACGCTGATGCACCGGAGACACA								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_201756	ILMN_201756	2410041F14RIK	ri|2410041F14|ZX00047P09|AK010648|786					AK010648	2410041F14Rik		ILMN_1245742	004540209	S	736	TTTATTTAAAATAAAGTTTGATGCTCCTAATAAAAGCAAATGTACAACTT										
Mus musculus	RefSeq	ILMN_212103	ILMN_212103	PCCB	NM_025835.1	NM_025835.1		66904	13385309	NM_025835.1	Pccb	NP_080111.1	ILMN_2875938	003390020	S	2037	GGCTGGGCTCTGTGCTGAAGAGGCTAAGAGTTCTTAGTCTTTCCCCAGCT	9	-	100791594-100791643	9qE4	Mus musculus propionyl Coenzyme A carboxylase, beta polypeptide (Pccb), mRNA.	A protein complex that catalyzes the first step in long-chain fatty acid biosynthesis. For example, in E. coli the complex is heterohexameric and composed of biotin carbonyl carrier protein, biotin carboxylase and the acetate CoA-transferase complex [goid 9317] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + propanoyl-CoA + HCO3- = ADP + phosphate + (S)-methylmalonyl-CoA [goid 4658] [evidence ISS]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]	R74805; 1300012P06Rik; AI314687	R74805; 1300012P06Rik; AI314687
Mus musculus	RefSeq	ILMN_253794	ILMN_253794	DFNB59	NM_001080711.1	NM_001080711.1		381375	123959713	NM_001080711.1	Dfnb59	NP_001074180.1	ILMN_2862676	005090068	S	582	ATCCGCCAATCAAGGAGCAGCAGGAAGGCGGTGCTGTGCGTGGTCATGGA	2	+	76490276-76490325	2qC3	Mus musculus deafness, autosomal recessive 59 (human) (Dfnb59), mRNA. XM_912827 XM_986722	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm1001	Gm1001
Mus musculus	Riken	ILMN_203606	ILMN_203606	RHOIP3-PENDING	ri|A930017O22|PX00066C09|AK044512|3104					AK044512	Rhoip3-pending		ILMN_1212733	005080427	S	2838	AGGCAGTGAGCAGGTACATAAGCTAGAGGAAGAGCTGGAGGCCCGAGAGG										
Mus musculus	Riken	ILMN_203325	ILMN_203325	ZFPM2	ri|8030444C01|PX00103D06|AK033131|1606					AK033131	Zfpm2		ILMN_2556437	005050279	S	675	GTGTGCTTGTGCTGCTTGTGTGTGCTGCTTATATGGGAGTTTGGGTAAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]		
Mus musculus	RefSeq	ILMN_255027	ILMN_255027	OLFR1178	NM_001011868.1	NM_001011868.1		258203	58801497	NM_001011868.1	Olfr1178	NP_001011868.1	ILMN_2898381	007150647	S	377	AGCCCTTGCACTACACCATCCTTATGAGCAGGCAGAAGTGTGATGCTGTG	2	+	88231782-88231831	2qD	Mus musculus olfactory receptor 1178 (Olfr1178), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR225-6P	MOR225-6P
Mus musculus	RefSeq	ILMN_197281	ILMN_255027	OLFR1178	NM_001011868.1	NM_001011868.1		258203	58801497	NM_001011868.1	Olfr1178	NP_001011868.1	ILMN_1241122	003890095	S	909	GTCAGGGAGTGAAGGAAACAGGCTGAAGGGTGTCACTGTTTTCCACCATC	2	+	88232314-88232363	2qD	Mus musculus olfactory receptor 1178 (Olfr1178), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR225-6P	MOR225-6P
Mus musculus	RefSeq	ILMN_201212	ILMN_201212	LOC382080	XM_358703.1	XM_358703.1			38089871	XM_358703.1	LOC382080		ILMN_2541491	003290326	S	247	GGACCTGCAGCATCATGGTTTCCTATCTCACGAGCTGTCTCAGTGCCCTG										
Mus musculus	RefSeq	ILMN_224251	ILMN_260319	STC1	NM_009285.3	NM_009285.3		20855	134053907	NM_009285.3	Stc1	NP_033311.3	ILMN_2777319	003120747	S	3402	GATCTCCTCTCTTGTGATTTGGTTGCACTTTAGAACATTTTTGTGCCGTA	14	+	69659117-69659166	14qD2	Mus musculus stanniocalcin 1 (Stc1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The regulation of the levels, transport, and metabolism of monovalent inorganic anions within a cell or between a cell and its external environment [goid 30320] [evidence TAS]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence TAS]	Stc	Stc
Mus musculus	RefSeq	ILMN_200471	ILMN_200471	LOC384311	XM_357560.1	XM_357560.1			38082368	XM_357560.1	LOC384311		ILMN_2538876	002680592	S	525	GTACGAAGGCATCCTGGATGCAAGGCCCACAACAGCACAGTGTAAACCTG										
Mus musculus	RefSeq	ILMN_185669	ILMN_185669	V1RD19	NM_207619.1	NM_207619.1		404288	46518537	NM_207619.1	V1rd19	NP_997502.1	ILMN_2428992	001690367	S	811	CTGAGGCATTGCAATGACATTTTGGTTTCGGGTTTCCCTACAATTTATCC					Mus musculus vomeronasal 1 receptor, D19 (V1rd19), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_238781	ILMN_238781	GLRX	NM_053108.2	NM_053108.2		93692	31981457	NM_053108.2	Glrx	NP_444338.2	ILMN_2945348	004050112	S	1030	TGTCCAGAAAATCCCAAGCAGCTGTGTGTTGATCCGAGTTAGAGGGCCAG	13	+	76315882-76315931	13qC1	Mus musculus glutaredoxin (Glrx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 2 glutathione + protein-disulfide = oxidized glutathione + protein-dithiol [goid 19153] [evidence TAS]	D13Wsu156e; Glrx1; C86710	D13Wsu156e; Glrx1; C86710
Mus musculus	RefSeq	ILMN_214132	ILMN_214132	BZW2	NM_025840.2	NM_025840.2		66912	31981159	NM_025840.2	Bzw2	NP_080116.2	ILMN_2644587	004150181	S	1250	AGAAGCACACGCCGCCAAAGGCAAGAGCGTCTTTCTTGACCAGATGAAGA	12	-	36819569-36819618	12qA3	Mus musculus basic leucine zipper and W2 domains 2 (Bzw2), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110001I24Rik; Bdm2; HSPC028; MGC7203	1110001I24Rik; Bdm2; HSPC028; MGC7203
Mus musculus	RefSeq	ILMN_214132	ILMN_214132	BZW2	NM_025840.2	NM_025840.2		66912	31981159	NM_025840.2	Bzw2	NP_080116.2	ILMN_2876482	004480546	S	1611	TCAACAAGGGGGTCAGGTAGGAACCTGAAGCTCAAAACTCAGTACACCCC	12	-	36818551-36818600	12qA3	Mus musculus basic leucine zipper and W2 domains 2 (Bzw2), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110001I24Rik; Bdm2; HSPC028; MGC7203	1110001I24Rik; Bdm2; HSPC028; MGC7203
Mus musculus	RefSeq	ILMN_189646	ILMN_312494	LOC100041725	XM_001476892.1	XM_001476892.1		100041725	149251216	XM_001476892.1	LOC100041725	XP_001476942.1	ILMN_1224561	004890093	S	1532	CCCAACACTTCACATCTCCCTGCCCTTTCAGCCTTCCTCCTTTTAGCCCC	3	-	78769629-78769678	3qE3	PREDICTED: Mus musculus hypothetical protein LOC100041725 (LOC100041725), mRNA.					
Mus musculus	MEEBO	ILMN_223853	ILMN_223853	SLC27A5	scl31750.10.1_0				6678010	NM_009512	Slc27a5		ILMN_1228815	007400450	S	2018	AAGTCACGGCTGGTGCGTGAGGGTTTTGATGTGGGGATCATTGCTGACCC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reactions: (1) ATP + cholate + CoA = AMP + diphosphate + choloyl-CoA and (2) ATP + (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate + CoA = AMP + diphosphate + (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA [goid 47747] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200544	ILMN_315329	LOC100047675	XM_001478658.1	XM_001478658.1		100047675	149254395	XM_001478658.1	LOC100047675	XP_001478708.1	ILMN_2764127	004040128	S	210	TGAGGGTGGCCTTTTGAGCCCCTCCCCTCTGACAGACACAAAGAACACTC					PREDICTED: Mus musculus similar to sulfatase modifying factor 2 (LOC100047675), mRNA.					
Mus musculus	RefSeq	ILMN_214624	ILMN_214624	EDG3	NM_010101.2	NM_010101.2		13610	31542593	NM_010101.2	Edg3	NP_034231.1	ILMN_2935985	001570685	S	4101	TGAGACACCATTTCTCACTGAACCCGAAGCTGCCAGCTTTGGCTAGATTG	13	+	51435056-51435105	13qA5	Mus musculus endothelial differentiation, sphingolipid G-protein-coupled receptor, 3 (Edg3), mRNA.				AI132464; LPb3; S1P3	AI132464; LPb3; S1P3
Mus musculus	RefSeq	ILMN_198676	ILMN_198676	LOC207350	XM_142248.3	XM_142248.3			38086792	XM_142248.3	LOC207350		ILMN_1230828	001110524	S	1828	TGCCCAGGGAAACCTGCCCTCAATGTGACCCACTTTATCCACCGCCTGTG										
Mus musculus	RefSeq	ILMN_220343	ILMN_220343	SH3YL1	NM_013709.4	NM_013709.4		24057	141803283	NM_013709.4	Sh3yl1	NP_038737.1	ILMN_1237964	000830360	S	1630	CAGACAGGATTCACTGTTTACTGCAAACGTCAAGCACACCCTTGCTCTGC	12	+	31644908-31644957	12qA2	Mus musculus Sh3 domain YSC-like 1 (Sh3yl1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI314953; YSC84; Ray; MGC118159	AI314953; YSC84; Ray; MGC118159
Mus musculus	Riken	ILMN_205804	ILMN_205804	2010015J01RIK	ri|A130004L09|PX00121K07|AK037305|3879					AK037305	2010015J01Rik		ILMN_1249677	000460528	S	3065	GAGCCTAGCCATCCTTAACTGGCTTTGATGCACAGGGGACATGCTTCGGG										
Mus musculus	Riken	ILMN_207387	ILMN_207387	C530024C18RIK	ri|C530024C18|PX00669K05|AK082961|2248					AK082961	C530024C18Rik		ILMN_2587220	005270296	S	2039	CTTGCTTTCAAGTTCAGAGTTGCTTTGGCTCGGCAGGTGAATACATTGCA										
Mus musculus	RefSeq	ILMN_200170	ILMN_200170	LOC385855	XM_358974.1	XM_358974.1			38080774	XM_358974.1	LOC385855		ILMN_1222715	006200152	S	2443	CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACACGGGAGC										
Mus musculus	RefSeq	ILMN_209698	ILMN_209698	ALPK3	NM_054085.2	NM_054085.2		116904	117938323	NM_054085.2	Alpk3	NP_473426.2	ILMN_3001417	004260274	S	6247	CAGCACCCTGGGCCCTTTCTAGATACCCCTCCTGAGACCTGGAATGGAGT	7	+	88250376-88250425	7qD3	Mus musculus alpha-kinase 3 (Alpk3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	D330016D04; MAK; Midori; KIAA1330; mKIAA1330; AW319487	D330016D04; MAK; Midori; KIAA1330; mKIAA1330; AW319487
Mus musculus	RefSeq	ILMN_200650	ILMN_319936	MPEG1	NM_010821.1	NM_010821.1		17476	133506752	NM_010821.1	Mpeg1	NP_034951.1	ILMN_1247377	004010221	S	4197	CAAGGCACATCAGAAGACTCCCAGATCTTTAATGCAGAAACTTCCTGTTG	19	+	12539636-12539685	19qA	Mus musculus macrophage expressed gene 1 (Mpeg1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MPS1; MGC150003; MGC150002; Mpg-1	MPS1; MGC150003; MGC150002; Mpg-1
Mus musculus	RefSeq	ILMN_211149	ILMN_211149	EIF3EIP	NM_145139.2	NM_145139.2		223691	51093839	NM_145139.2	Eif3eip	NP_660121.2	ILMN_2720520	000380278	S	1635	CCAAAGTTGCCAGACGCTATGGGGATTTCTTTATCCGACAGATCCACAAG	15	+	78923789-78923838	15qE1	Mus musculus eukaryotic translation initiation factor 3, subunit E interacting protein (Eif3eip), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]; A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures [goid 1650] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Eif3ip; 0610011H21Rik; MGC37328; HSP-66Y; Eif3s6ip; PAF67	Eif3ip; 0610011H21Rik; MGC37328; HSP-66Y; Eif3s6ip; PAF67
Mus musculus	RefSeq	ILMN_211149	ILMN_211149	EIF3EIP	NM_145139.2	NM_145139.2		223691	51093839	NM_145139.2	Eif3eip	NP_660121.2	ILMN_2613044	000630600	S	1528	GAAGAATCTGGTGTGGACCAGTGGCATTTCTGCCCTAGATGGCGAATTCC	15	+	78920307-78920356	15qE1	Mus musculus eukaryotic translation initiation factor 3, subunit E interacting protein (Eif3eip), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]; A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures [goid 1650] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Eif3ip; 0610011H21Rik; MGC37328; HSP-66Y; Eif3s6ip; PAF67	Eif3ip; 0610011H21Rik; MGC37328; HSP-66Y; Eif3s6ip; PAF67
Mus musculus	RefSeq	ILMN_220491	ILMN_220491	TMEM209	NM_178625.3	NM_178625.3		72649	40254355	NM_178625.3	Tmem209	NP_848740.3	ILMN_2830837	001710632	S	3181	GGTTGCTGTAGAGTTCCTATAACAATGTCTACAAGTGTTTGAGCTAGCTG	6	-	30431405-30431454	6qA3.3	Mus musculus transmembrane protein 209 (Tmem209), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI428435	AI428435
Mus musculus	RefSeq	ILMN_220491	ILMN_220491	TMEM209	NM_178625.3	NM_178625.3		72649	40254355	NM_178625.3	Tmem209	NP_848740.3	ILMN_2830830	006480242	S	3255	ACAGAATTGGCACAGACATGGTGGGAAATTGCCAGGAACCTCAGCTGCTC	6	-	30431331-30431380	6qA3.3	Mus musculus transmembrane protein 209 (Tmem209), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI428435	AI428435
Mus musculus	RefSeq	ILMN_220491	ILMN_220491	TMEM209	NM_178625.3	NM_178625.3		72649	40254355	NM_178625.3	Tmem209	NP_848740.3	ILMN_2722759	006420367	S	2017	CTGCTTTCATTGTTGGATAGTAGTGTAAGTTCTCAGATGAACCTTGCTAG	6	-	30432569-30432618	6qA3.3	Mus musculus transmembrane protein 209 (Tmem209), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI428435	AI428435
Mus musculus	RefSeq	ILMN_221189	ILMN_221189	PIH1D1	NM_029406.1	NM_029406.1		68845	21313051	NM_029406.1	Pih1d1	NP_083682.1	ILMN_2806124	004230524	S	982	ACTGATGGTGTCCATGCCCCTCCTGACAGCGTCTTCTTGACCAGAGTGCC	7	+	45027987-45028025:45028026-45028036	7qB4	Mus musculus PIH1 domain containing 1 (Pih1d1), mRNA.				4933413A04Rik; Nop17; 1110061L23Rik	4933413A04Rik; Nop17; 1110061L23Rik
Mus musculus	RefSeq	ILMN_199552	ILMN_199552	LOC383623	XM_357162.1	XM_357162.1			38074189	XM_357162.1	LOC383623		ILMN_1236785	005810242	S	50	GTCTAGTAGAACTCAGCGGAGAGCTTGTGGACAAATGTATAGGGTCAAGA										
Mus musculus	RefSeq	ILMN_211024	ILMN_211024	4931417E11RIK	NM_025737.2	NM_025737.2		66740	141802493	NM_025737.2	4931417E11Rik	NP_080013.1	ILMN_2611700	004920398	S	807	GCTACAGTGATCTGATAAAAAAGGACAGACTTCTCGTTCTCTTCAGCCAG	6	-	73418805-73418854	6qC1	Mus musculus RIKEN cDNA 4931417E11 gene (4931417E11Rik), mRNA.					
Mus musculus	MEEBO	ILMN_192513	ILMN_192513	1700023G08RIK	scl8749.1.1_330						1700023G08Rik		ILMN_2488776	002600482	S	5	TGCCCAGGGAGTGTGATCTAATCATTGGTACATGAGAGTTCTGGGTCAAG										
Mus musculus	RefSeq	ILMN_197477	ILMN_197477	LOC381435	XM_358578.1	XM_358578.1			38076171	XM_358578.1	LOC381435		ILMN_1215051	001770021	S	796	AGAGAAAGTTTCCTTTTCCACGCAGTTTATGCGTCCCGAGGCCTGGGCCC										
Mus musculus	MEEBO	ILMN_216031	ILMN_216031	NDUFB4	scl48493.1_0	XM_148372.1			20892462	XM_148372.1	Ndufb4		ILMN_1233496	004670470	S	833	AAAATATTTTGGCAAGTGTGCTTTTAGACAGTTTCTTCTGTAAAAGCTGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]		
Mus musculus	Riken	ILMN_205582	ILMN_205582	A730013P10RIK	ri|A730013P10|PX00149J09|AK042657|2221					AK042657	A730013P10Rik		ILMN_1247524	005360270	S	1835	CTCCAAAGACTTTCAAGGACCTGTTGCTCAGCCTTCTTTGCTCTAAACAC										
Mus musculus	MEEBO	ILMN_223890	ILMN_223890	ETV5	scl48642.15_70				24528549	NM_023794	Etv5		ILMN_1235329	007610343	S	3124	AATTTGCTGTCCTTGACACTCCACACATTGTTGTTCCTCACGTGTGGGAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_194136	ILMN_243849	POLR2L	XM_888022.3	XM_888022.3		66491	149258256	XM_888022.3	Polr2l	XP_893115.2	ILMN_2503728	006290075	S	1264	GCCTGGCTGTGGCCCTGTGGCTAAGTCCTGTTACCCTGGAAGGAACTGTT	7	-	148659053-148659102	7qF5	PREDICTED: Mus musculus polymerase (RNA) II (DNA directed) polypeptide L (Polr2l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219618	ILMN_219618	CCDC40	NM_175430.4	NM_175430.4		207607	146198588	NM_175430.4	Ccdc40	NP_780639.1	ILMN_2711329	005360239	S	4130	AGCTGATGGAGCGTAAGCGCCTGAGCGTCCGGCTGTCCCAGCTCAACAAG				11qE2	Mus musculus coiled-coil domain containing 40 (Ccdc40), mRNA.				B930008I02Rik; RP23-13O17.4; MGC109697	B930008I02Rik; RP23-13O17.4; MGC109697
Mus musculus	RefSeq	ILMN_231208	ILMN_231208	HMX2	NM_145998.2	NM_145998.2		15372	110625930	NM_145998.2	Hmx2	NP_666110.1	ILMN_3161049	003400278	S	449	TCTCACCCGGACTTTAAGGAAGAGAAGGAGAGGCTTTTGCCGGCGGGCTC	7	+	138698024-138698073	7qF3	Mus musculus H6 homeo box 2 (Hmx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Nkx5-2; Nkx-5.2; MGC32455	Nkx5-2; Nkx-5.2; MGC32455
Mus musculus	Riken	ILMN_204104	ILMN_204104	A730089E14RIK	ri|A730089E14|PX00152F20|AK043370|993					AK043370	A730089E14Rik		ILMN_1245641	001780575	S	669	CGTGCTAGACCGGAGTTTGTCGAGGACCACCCTGCCTATTTCTTCCAAGC										
Mus musculus	Riken	ILMN_206237	ILMN_206237	C630029M13RIK	ri|C630029M13|PX00084D12|AK083231|995					AK083231	C630029M13Rik		ILMN_2578614	001850168	S	791	GGTGACTGGTGGCACATCCCCACCCCATAGAATCTGTCCCAGAGGAAGTC										
Mus musculus	RefSeq	ILMN_209773	ILMN_209773	SPAG9	NM_027569.2	NM_027569.2		70834	70887771	NM_027569.2	Spag9	NP_081845.2	ILMN_3061192	004920682	I	409	CTGCTGCGGGACGACAACGAGCAGCTCATCACCCAGTACGAGCGGGAGAA	11	+	93857813-93857862	11qD	Mus musculus sperm associated antigen 9 (Spag9), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IDA]; Interacting selectively with JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family [goid 8432] [evidence IDA]	Jip4; syd1; JSAP2; 3110018C07Rik; 4831406C20Rik; JLP; 4733401I23Rik; AW552012; Mapk8ip4; JSAP2a	Jip4; syd1; JSAP2; 3110018C07Rik; 4831406C20Rik; JLP; 4733401I23Rik; AW552012; Mapk8ip4; JSAP2a
Mus musculus	RefSeq	ILMN_216583	ILMN_216583	CCT7	NM_007638.3	NM_007638.3		12468	141802764	NM_007638.3	Cct7	NP_031664.2	ILMN_1233793	005490609	S	1794	GCTTGGTGTGTTTTTCATAAACATTTTCCTGCCTTAGAATTGGAGTCATG	6	+	85414879-85414928	6qC3	Mus musculus chaperonin containing Tcp1, subunit 7 (eta) (Cct7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cctz; AL022769; Ccth; AA408524	Cctz; AL022769; Ccth; AA408524
Mus musculus	RefSeq	ILMN_223046	ILMN_223046	OLFR900	NM_146874.1	NM_146874.1		258874	22129128	NM_146874.1	Olfr900	NP_667085.1	ILMN_2758599	001400079	S	58	CTTATGGGATTAACAGTTCAAAAAGAGCTCCAGTTGCCTCTTTTTGTCCT	9	+	38185525-38185574	9qA5.1	Mus musculus olfactory receptor 900 (Olfr900), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR170-2; MOR170-13; MGC129240	MOR170-2; MOR170-13; MGC129240
Mus musculus	RefSeq	ILMN_223046	ILMN_223046	OLFR900	NM_146874.1	NM_146874.1		258874	22129128	NM_146874.1	Olfr900	NP_667085.1	ILMN_2913877	005080167	S	576	GCTCTCTTGTACTAGCACCTATGTCAACGAGCTTGTGAGCTCTGCTGTGG	9	+	38186043-38186092	9qA5.1	Mus musculus olfactory receptor 900 (Olfr900), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR170-2; MOR170-13; MGC129240	MOR170-2; MOR170-13; MGC129240
Mus musculus	MEEBO	ILMN_209443	ILMN_209443	A630082K20RIK	scl00338523.1_40				51711914	XM_145254	A630082K20Rik		ILMN_2595814	002940600	S	6018	AGTTCAGTTTTGTCTGTCCGTTTGTCTGTCCGTGAAGGTGTCTTCTCCAG										
Mus musculus	MEEBO	ILMN_209443	ILMN_209443	A630082K20RIK	scl00338523.1_40				51711914	XM_145254	A630082K20Rik		ILMN_1231072	007160132	S	4189	ATAGCAAGCATGTTGGAATAGATCTTTGTGTGTGTGTGTGTGTATGCTAC										
Mus musculus	Riken	ILMN_207094	ILMN_207094	HIPK2	ri|E330003F13|PX00210F24|AK087674|2238					AK087674	Hipk2		ILMN_1218273	006560709	S	1938	AGTGCTGGACCACAGCTGGAGACTGTTTGCGAGCCAAGTGTCATGCTCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system that can be controlled at will [goid 50882] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	Riken	ILMN_201754	ILMN_201754	2510008P16RIK	ri|2510008P16|ZX00047L06|AK010939|1046					AK010939	2510008P16Rik		ILMN_1229515	001190176	S	517	CCCCTTGTGGGGCCGAGAAACCGAAGTGTAGGTGACGGTTCCGAGACATT										
Mus musculus	RefSeq	ILMN_210631	ILMN_210631	RNF11	NM_013876.3	NM_013876.3		29864	133892912	NM_013876.3	Rnf11	NP_038904.1	ILMN_1216143	005270102	S	2020	TTCATTTAGCATGTGTTTATTTTCCTTATGTTCTCCAGGTGATTCGTTCC	4	-	109125524-109125573	4qC7	Mus musculus ring finger protein 11 (Rnf11), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IPI]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210631	ILMN_210631	RNF11	NM_013876.3	NM_013876.3		29864	133892912	NM_013876.3	Rnf11	NP_038904.1	ILMN_2654403	005090500	S	424	CCGACACCTAGCCAGACTCGGCTAGCAACTCAGCTGACTGAAGAGGAACA	4	-	109129595-109129644	4qC7	Mus musculus ring finger protein 11 (Rnf11), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IPI]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_226516	ILMN_226516	1190005F20RIK	NM_026876.1	NM_026876.1		98685	74959789	NM_026876.1	1190005F20Rik	NP_081152.1	ILMN_2963792	003840041	S	2355	ACCGACAGGGTTGAGATGTCCGTGAGTGACAAAGCGGAAGCGAGTGGCTG	1	+	153220091-153220140	1qG2	Mus musculus RIKEN cDNA 1190005F20 gene (1190005F20Rik), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N2-methylguanine [goid 4809] [evidence IEA]	C1orf25; AW226554; Trm1-like; MGC70241	C1orf25; AW226554; Trm1-like; MGC70241
Mus musculus	RefSeq	ILMN_213838	ILMN_213838	APOA5	NM_080434.3	NM_080434.3		66113	142372938	NM_080434.3	Apoa5	NP_536682.2	ILMN_2641301	007380762	S	2240	CCCTTACCCTTGGTCCCATGTTCCAGATTCCTCATGCCTGCTTGACTCTC	9	+	46079921-46079970	9qA5.2	Mus musculus apolipoprotein A-V (Apoa5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The acquisition, loss or modification of a protein or lipid within a triglyceride-rich lipoprotein particle, including the hydrolysis of triglyceride by lipoprotein lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride from a triglyceride-rich lipoprotein particle [goid 34370] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	1300007O05Rik; Apoav; RAP3	1300007O05Rik; Apoav; RAP3
Mus musculus	RefSeq	ILMN_200054	ILMN_200054	LOC383183	XM_356908.1	XM_356908.1			38080076	XM_356908.1	LOC383183		ILMN_2537439	002450014	S	633	GTCAGATTCTTCTGGGCTCTCCATGGCTGAGTTGGGCCAGGCTACTGGCT										
Mus musculus	RefSeq	ILMN_220999	ILMN_220999	PSME3	NM_011192.3	NM_011192.3		19192	118130228	NM_011192.3	Psme3	NP_035322.1	ILMN_2729718	002940097	S	2408	CAGTAACAAACCAATCGCATTTTCGTTGGGCAGTGCACCTATCCACCCTC	11	+	101184633-101184682	11qD	Mus musculus proteaseome (prosome, macropain) 28 subunit, 3 (Psme3), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex that activates the hydrolysis of small nonubiquitinated peptides by binding to the proteasome core complex [goid 8537] [evidence IEA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the activation of the proteasome, a large multisubunit complex which performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis [goid 8538] [evidence IEA]	PA28gamma; pa28g; Ki; AU020960; AA410043	PA28gamma; pa28g; Ki; AU020960; AA410043
Mus musculus	RefSeq	ILMN_215128	ILMN_215128	CD83	NM_009856.1	NM_009856.1		12522	6753355	NM_009856.1	Cd83	NP_033986.1	ILMN_2865016	007150377	S	1726	TGGTCTTCTGTGTGAACTCCTCCTGAGAAACGTGGAGACTGGCTCAGCGC	13	+	43898178-43898227	13qA4	Mus musculus CD83 antigen (Cd83), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha beta T cell differentiation [goid 43372] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic substance stimulus [goid 14070] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production [goid 32713] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-10 production [goid 32733] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-2 production [goid 32743] [evidence IMP]		MGC130312; MGC130313	MGC130312; MGC130313
Mus musculus	MEEBO	ILMN_184216	ILMN_184216	4122401K19RIK	scl0074333.1_142						4122401K19Rik		ILMN_2416813	002350465	S	12	CCTTGACTGTAGGCTCTGGAATCAGAAAAGAGTGCACAAAGAGGGAAAGA										
Mus musculus	MEEBO	ILMN_195003	ILMN_195003	AZI2	scl36368.11_22				31980756	NM_013727	Azi2		ILMN_1251934	006350242	S	20	TCACATAAGCCTCTGATGGCAGTGCTGGCTAAGTTATCGCCGTAAGAGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]			
Mus musculus	RefSeq	ILMN_223383	ILMN_223383	ALX3	NM_007441.1	NM_007441.1		11694	7106249	NM_007441.1	Alx3	NP_031467.1	ILMN_3128478	004010521	A	897	CAGGATCTGGAAGCCCAGGGGGGCCCTGTCTCATGTCTCCAGAGGGCATC	3	+	107732855-107732904	3qF2.3	Mus musculus aristaless 3 (Alx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223383	ILMN_223383	ALX3	NM_007441.1	NM_007441.1		11694	7106249	NM_007441.1	Alx3	NP_031467.1	ILMN_3052026	004480400	I	1492	GACTGTTTCTAAGTCCAGGGAGCCCAGGAAGATGGGAGGAGGGTGCAGAC	3	+	107733450-107733499	3qF2.3	Mus musculus aristaless 3 (Alx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223383	ILMN_223383	ALX3	NM_007441.1	NM_007441.1		11694	7106249	NM_007441.1	Alx3	NP_031467.1	ILMN_1255793	000730709	S	1645	CGGTGAAGGTCAGCTCAATAATAGGTGGGGGGGTCTCCTCTGTTCCAAGC	3	+	107733603-107733652	3qF2.3	Mus musculus aristaless 3 (Alx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199781	ILMN_199781	LOC383925	XM_357327.1	XM_357327.1			38077287	XM_357327.1	LOC383925		ILMN_1255603	003460273	S	8	TTGTGGGCCAGCGTTGTTTCAAGATATTTTCCCACGACAACGTGCTCTCC										
Mus musculus	RefSeq	ILMN_223818	ILMN_232245	LIF	NM_008501.2	NM_008501.2		16878	88014750	NM_008501.2	Lif	NP_032527.1	ILMN_1234792	005050301	S	160	ATGAACTTCTGAAAACGGCCTGCATCTAAGGTCTCCTCCAAGGCCCTCTG	11	+	4166538-4166587	11qA1	Mus musculus leukemia inhibitory factor (Lif), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [evidence ISO]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence ISO]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IDA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of meiosis [goid 45835] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42503] [evidence IDA]; The process by which the anatomical structures of muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 48644] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IMP]; Interacting selectively with the leukemia inhibitory factor receptor [goid 5146] [evidence ISO]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISO]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_186166	ILMN_232245	LIF	NM_008501.2	NM_008501.2		16878	88014750	NM_008501.2	Lif	NP_032527.1	ILMN_1242312	005890204	S	210	CCAGAGGGCCTTGGAGGAGACCTTAGATGCAGGCCGTTTTCAGAAGTTCA	11	+	4166588-4166601:4166602-4166620:4168187-4168203	11qA1	Mus musculus leukemia inhibitory factor (Lif), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [evidence ISO]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence ISO]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IDA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of meiosis [goid 45835] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42503] [evidence IDA]; The process by which the anatomical structures of muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 48644] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IMP]; Interacting selectively with the leukemia inhibitory factor receptor [goid 5146] [evidence ISO]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISO]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_186473	ILMN_248686	6330405D24RIK	XM_917516.3	XM_917516.3		70715	149249970	XM_917516.3	6330405D24Rik	XP_922609.3	ILMN_2435825	001570524	S	1212	CTACAAGAACCACCAGCCTTTCGTGGTCAATGGACTAGAACGATAACTTG	2	-	119697919-119697968	2qE5	PREDICTED: Mus musculus RIKEN cDNA 6330405D24 gene (6330405D24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199656	ILMN_248686	6330405D24RIK	XM_917516.3	XM_917516.3		70715	149249970	XM_917516.3	6330405D24Rik	XP_922609.3	ILMN_1237795	007610554	S	189	AGGCGACTGTTTCCAGCAGCCATTTTGCCGAGAACTTGCCCTCAGTGCTC	2	-	119698942-119698991	2qE5	PREDICTED: Mus musculus RIKEN cDNA 6330405D24 gene (6330405D24Rik), mRNA.					
Mus musculus	Riken	ILMN_206216	ILMN_206216	NOV	ri|C130088N23|PX00172A19|AK081944|2303					AK081944	Nov		ILMN_1231797	007550661	S	143	TGCAGCCAACCGGTTTTGCGTCCCTGGAGCGCACTATAAAACCTGCACGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]		
Mus musculus	RefSeq	ILMN_256779	ILMN_221689	ORC2L	NM_008765.2	NM_008765.2		18393	31982141	NM_008765.2	Orc2l	NP_032791.1	ILMN_3163144	005550292	A	1635	GATTCATGTCTTACGAAGCCTTACCCCCAATGCAAGGGGGATTTTCAGGC	1	-	58524542-58524556:58526512-58526546	1qC1.3	Mus musculus origin recognition complex, subunit 2-like (S. cerevisiae) (Orc2l), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multisubunit complex that is located at the replication origins of a chromosome [goid 808] [evidence IEA]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [evidence IDA]; The region of a condensed chromosome kinetochore closest to centromeric DNA; in mammals the CREST antigens (CENP proteins) are found in this layer; this layer may help define underlying centromeric chromatin structure and position of the kinetochore on the chromosome [goid 939] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with the DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally [goid 3688] [evidence IDA]	Orc2; AU041563	Orc2; AU041563
Mus musculus	RefSeq	ILMN_221689	ILMN_221689	ORC2L	NM_008765.2	NM_008765.2		18393	31982141	NM_008765.2	Orc2l	NP_032791.1	ILMN_1220661	003850431	S	3237	TGCTTAATTTCTCTAGTGTAACTCCTACAGTATAAACAAACATCTGATTA	1	-	58519699-58519748	1qC1.3	Mus musculus origin recognition complex, subunit 2-like (S. cerevisiae) (Orc2l), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multisubunit complex that is located at the replication origins of a chromosome [goid 808] [evidence IEA]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [evidence IDA]; The region of a condensed chromosome kinetochore closest to centromeric DNA; in mammals the CREST antigens (CENP proteins) are found in this layer; this layer may help define underlying centromeric chromatin structure and position of the kinetochore on the chromosome [goid 939] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with the DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally [goid 3688] [evidence IDA]	Orc2; AU041563	Orc2; AU041563
Mus musculus	RefSeq	ILMN_184680	ILMN_184680	V1RH11	NM_134236.1	NM_134236.1		171270	21955267	NM_134236.1	V1rh11	NP_598997.1	ILMN_1220469	001660082	S	879	GCTGATTCACAGGGATGGCCTTTGGTTAAATTTTGGCATGCTCTGTGGCA	13	+	22616798-22616847	13qA3.1	Mus musculus vomeronasal 1 receptor, H11 (V1rh11), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_190255	ILMN_253624	PPP1R2	NM_025800.3	NM_025800.3		66849	85540464	NM_025800.3	Ppp1r2	NP_080076.1	ILMN_2759954	002850192	S	2135	CGGTTCCTCTAACATGATAGAGATTATGTGGGTTTCCTAGTTCCTGTGTG	16	-	31253516-31253565	16qB2	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 2 (Ppp1r2), mRNA.		Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	0610025N14Rik; IPP-2; 4930440J04Rik; 2310007G06Rik; 5430408E15Rik; D16Ertd248e	0610025N14Rik; IPP-2; 4930440J04Rik; 2310007G06Rik; 5430408E15Rik; D16Ertd248e
Mus musculus	MEEBO	ILMN_213810	ILMN_213810	4930463G05RIK	scl0070806.2_159	NM_027559.1			21312555	NM_027559.1	4930463G05Rik		ILMN_2691041	006760259	S	942	AGAAACCCTGAAGGTGACCGTGCTCCAGAAGGCGGAGGAGTTTCCACTTC										
Mus musculus	MEEBO	ILMN_213810	ILMN_213810	4930463G05RIK	scl0070806.2_159	NM_027559.1			21312555	NM_027559.1	4930463G05Rik		ILMN_2641040	002070131	S	2071	CACCATCGTGTTCAGTTAGAGTCGTTGACATTGCTGTTACGCCATCGGGA										
Mus musculus	RefSeq	ILMN_215858	ILMN_215858	OSGEP	NM_133676.2	NM_133676.2		66246	84662767	NM_133676.2	Osgep	NP_598437.2	ILMN_2664511	004490465	S	1199	GCCCTCTTCGCTGACAAGGGTATGGACCCTATATAAGGCTTAGGGTCCCT	14	-	51535408-51535457	14qC1	Mus musculus O-sialoglycoprotein endopeptidase (Osgep), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	GCPL-1; PRSMG1; 1500019L24Rik	GCPL-1; PRSMG1; 1500019L24Rik
Mus musculus	RefSeq	ILMN_209627	ILMN_209627	PMAIP1	NM_021451.2	NM_021451.2		58801	118130467	NM_021451.2	Pmaip1	NP_067426.1	ILMN_1245289	004060136	S	1567	CTTATATTCTCTAGGTTTGCCTGTTACTGGAAGCGAAAGCTAACACGCAG	18	+	66624125-66624174	18qE1	Mus musculus phorbol-12-myristate-13-acetate-induced protein 1 (Pmaip1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IMP]; The process by which a protein is incorporated into a mitochondrial membrane as an early step in apoptosis [goid 1844] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Noxa	Noxa
Mus musculus	RefSeq	ILMN_209627	ILMN_209627	PMAIP1	NM_021451.2	NM_021451.2		58801	118130467	NM_021451.2	Pmaip1	NP_067426.1	ILMN_2670625	005130367	S	1477	GAGAGGCAAGAAACTTGAGTAGACATTCCCAAAAGGCAGGTGGCCAGCAG	18	+	66624035-66624084	18qE1	Mus musculus phorbol-12-myristate-13-acetate-induced protein 1 (Pmaip1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IMP]; The process by which a protein is incorporated into a mitochondrial membrane as an early step in apoptosis [goid 1844] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Noxa	Noxa
Mus musculus	RefSeq	ILMN_220729	ILMN_234691	SERPINA3G	NM_009251.1	NM_009251.1		20715	86476055	NM_009251.1	Serpina3g	NP_033277.1	ILMN_2725927	001050092	S	1916	CTCAATGTCTCTTGTTGACCAACTACGTAGGACTGGTGGACACCTCTGCA	12	+	105480110-105480144	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 3G (Serpina3g), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA];  [goid 4869] [evidence IEA]	Spi2A; MGC107057; 2A2; Spi2/eb.1; spi2 (2a2); AI119734; Spi2-1	Spi2A; MGC107057; 2A2; Spi2/eb.1; spi2 (2a2); AI119734; Spi2-1
Mus musculus	RefSeq	ILMN_223642	ILMN_223642	BC062109	NM_182841.1	NM_182841.1		231503	33469052	NM_182841.1	BC062109	NP_878261.1	ILMN_2766971	006250403	S	2762	GTGGTGTGAGAAAGCCTCGAGTAGAGTATTCTCTTATTAAAAAAGGCGTC	5	-	100507163-100507212	5qE4	Mus musculus cDNA sequence BC062109 (BC062109), mRNA.					
Mus musculus	RefSeq	ILMN_219070	ILMN_219070	COTL1	NM_028071.1	NM_028071.1		72042	19482159	NM_028071.1	Cotl1	NP_082347.1	ILMN_2915232	000990438	S	1418	GGCTTTGTTTGCTTTTGAAGACAGCTGAGGCGGGCTTGGCTCCTCGAGAG	8	-	122695323-122695372	8qE1	Mus musculus coactosin-like 1 (Dictyostelium) (Cotl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Reactions triggered in response to the presence of a fungus that act to protect the cell or organism [goid 50832] [evidence IDA]	Interacting selectively with any enzyme [goid 19899] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	1810074P22Rik; 2010004C08Rik; Clp	1810074P22Rik; 2010004C08Rik; Clp
Mus musculus	MEEBO	ILMN_224269	ILMN_224269	CATNA2	scl0001136.1_34				21918868	NM_145732	Catna2		ILMN_2777650	003140468	S	221	GCTCCAGTGCCAGGAGGTTTTACTATGACAGATATTCACTCAAGCTACAC										
Mus musculus	RefSeq	ILMN_217049	ILMN_217049	MOS	NM_020021.2	NM_020021.2		17451	111955035	NM_020021.2	Mos	NP_064405.2	ILMN_2982636	005720685	S	1103	ACCAGGGAGGTGCCTTACTCCGGCGAACCTCAGTACGTGCAGTATGCAGT	4	-	3798100-3798149	4qA1	Mus musculus Moloney sarcoma oncogene (Mos), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210838	ILMN_210838	GNL3L	NM_198110.1	NM_198110.1		237107	37674223	NM_198110.1	Gnl3l	NP_932778.1	ILMN_2609716	000110386	S	2674	ATGTCCTAAAGGCTAGACTGCTGAGAAACCTGGTAGCAGTGGCGGGGGAG	X	-	147419755-147419804	XqF3	Mus musculus guanine nucleotide binding protein-like 3 (nucleolar)-like (Gnl3l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	BC020354	BC020354
Mus musculus	RefSeq	ILMN_210838	ILMN_210838	GNL3L	NM_198110.1	NM_198110.1		237107	37674223	NM_198110.1	Gnl3l	NP_932778.1	ILMN_2628122	001340706	S	4340	GTGTCGTAAGTCACACGGGGGCTTATTTTATGGCATTAAGCTTTTAGCTT	X	-	147418089-147418138	XqF3	Mus musculus guanine nucleotide binding protein-like 3 (nucleolar)-like (Gnl3l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	BC020354	BC020354
Mus musculus	Riken	ILMN_203312	ILMN_203312	HPBRII4	ri|B830031K20|PX00073O07|AK046856|2807					AK046856	HPBRII4		ILMN_1254635	001090243	S	2527	ACTCATGAAGAGTGGGGACAGAGCACTGTGAATCTTTTGAATGTGGCAGG										
Mus musculus	RefSeq	ILMN_199904	ILMN_199904	LOC384050	XM_357389.1	XM_357389.1			38078846	XM_357389.1	LOC384050		ILMN_1244075	002120445	S	2532	TGCAGTGGCTCCTACCTTCAGCCCTCCCATTACCTGCTCTAAGGTCACAG										
Mus musculus	RefSeq	ILMN_214479	ILMN_214479	ANAPC5	NM_021505.2	NM_021505.2		59008	109809750	NM_021505.2	Anapc5	NP_067480.2	ILMN_3158200	001660632	A	2655	GCTGTCTGTAACTCCTGTTCCAGGGACTCTGACACCCTCAGGCAGACATA	5	-	123237523-123237572	5qF	Mus musculus anaphase-promoting complex subunit 5 (Anapc5), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AA986414; AA536819; 2510006G12Rik; Anpc5; AA408751	AA986414; AA536819; 2510006G12Rik; Anpc5; AA408751
Mus musculus	RefSeq	ILMN_214479	ILMN_214479	ANAPC5	NM_021505.2	NM_021505.2		59008	109809750	NM_021505.2	Anapc5	NP_067480.2	ILMN_2648397	002750240	S	1119	GGAGGCAATTAGGATTGCCCAGGAGTCCAACGATCACGTGTGTCTGCAGC	5	-	123252839-123252888	5qF	Mus musculus anaphase-promoting complex subunit 5 (Anapc5), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AA986414; AA536819; 2510006G12Rik; Anpc5; AA408751	AA986414; AA536819; 2510006G12Rik; Anpc5; AA408751
Mus musculus	RefSeq	ILMN_214479	ILMN_214479	ANAPC5	NM_021505.2	NM_021505.2		59008	109809750	NM_021505.2	Anapc5	NP_067480.2	ILMN_2738536	001070398	S	2413	CCAGGACTCCCTGCTTGATGGTGTGCATTTAGGGGTGGGTCATTACATGC	5	-	123237765-123237814	5qF	Mus musculus anaphase-promoting complex subunit 5 (Anapc5), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AA986414; AA536819; 2510006G12Rik; Anpc5; AA408751	AA986414; AA536819; 2510006G12Rik; Anpc5; AA408751
Mus musculus	RefSeq	ILMN_218980	ILMN_218980	AVPR1A	NM_016847.2	NM_016847.2		54140	33149328	NM_016847.2	Avpr1a	NP_058543.2	ILMN_1242999	002630195	S	1952	CACAAAGTGAACTGGTCCGTGATTGAAAACCCAGTGTTGCTGTCAATCTG	10	+	121889790-121889839	10qD2	Mus musculus arginine vasopressin receptor 1A (Avpr1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The regulation of blood pressure mediated by the signaling molecule vasopressin. Vasopressin is produced in the hypothalamus, and affects vasoconstriction, and renal water transport [goid 1992] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]	AVPR; V1a; Avpr1; V1aR	AVPR; V1a; Avpr1; V1aR
Mus musculus	RefSeq	ILMN_218980	ILMN_218980	AVPR1A	NM_016847.2	NM_016847.2		54140	33149328	NM_016847.2	Avpr1a	NP_058543.2	ILMN_2890935	006330482	S	2549	ATTTAAAGCCTTGGTTTCTTGGCTGTACAATGGGCTTGGTAACACTCACC	10	+	121890387-121890436	10qD2	Mus musculus arginine vasopressin receptor 1A (Avpr1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The regulation of blood pressure mediated by the signaling molecule vasopressin. Vasopressin is produced in the hypothalamus, and affects vasoconstriction, and renal water transport [goid 1992] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]	AVPR; V1a; Avpr1; V1aR	AVPR; V1a; Avpr1; V1aR
Mus musculus	RefSeq	ILMN_197126	ILMN_197126	LOC381332	XM_355290.1	XM_355290.1			38074198	XM_355290.1	LOC381332		ILMN_2527003	003710463	S	64	TCGGCAGGACCGCTGGCTGCATCAGCAGCTTAATGAAAGCAGAAGCCGCT										
Mus musculus	RefSeq	ILMN_220574	ILMN_254373	GAB3	NM_153073.2	NM_153073.2		210710	142356007	NM_153073.2	Gab3	NP_694713.1	ILMN_2723939	004830487	S	1808	GGACTGATGAGAGGCAATCCAAAGTGTGAGAAGTGTGGGCTTGGGTGTGA	X	-	72234037-72234058:72234059-72234086	XqA7.3	Mus musculus growth factor receptor bound protein 2-associated protein 3 (Gab3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5930433H21Rik	5930433H21Rik
Mus musculus	RefSeq	ILMN_220574	ILMN_254373	GAB3	NM_153073.2	NM_153073.2		210710	142356007	NM_153073.2	Gab3	NP_694713.1	ILMN_1226514	000270431	S	1662	CAGCTTGGATTATTTGGCCCTGGACTTCAATTCAACATCACCAGCCCCTG	X	-	72235400-72235449	XqA7.3	Mus musculus growth factor receptor bound protein 2-associated protein 3 (Gab3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5930433H21Rik	5930433H21Rik
Mus musculus	RefSeq	ILMN_221904	ILMN_221904	OLFR1030	NM_146588.1	NM_146588.1		258581	22129472	NM_146588.1	Olfr1030	NP_666799.1	ILMN_2978444	000050554	S	444	GCGTCTGATTGCTGGTCCCTATATCTATGGCTTCCTTAGTGGCCTGATGG	2	+	85824442-85824491	2qD	Mus musculus olfactory receptor 1030 (Olfr1030), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR196-2	MOR196-2
Mus musculus	RefSeq	ILMN_217168	ILMN_217168	EPSTI1	NM_178825.3	NM_178825.3		108670	146198651	NM_178825.3	Epsti1	NP_849147.1	ILMN_2679830	004780746	S	773	GACGTTTAGGGACTGAAGATTAAGTATACGAAGTGACAGACATAGCACAG				14qD3	Mus musculus epithelial stromal interaction 1 (breast) (Epsti1), transcript variant b, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2310046K10Rik; BRESI1; 5033415K03Rik	2310046K10Rik; BRESI1; 5033415K03Rik
Mus musculus	RefSeq	ILMN_219552	ILMN_246048	GABPB2	NM_029885.1	NM_029885.1		213054	124301211	NM_029885.1	Gabpb2	NP_084161.1	ILMN_2710380	003420452	S	2630	CCATCCAGCTCCCAGGGATCATGCCCTTTTCTGGCATGTGTGTATATCCA	3	-	94991695-94991744	3qF2.1	Mus musculus GA repeat binding protein, beta 2 (Gabpb2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	A430024B14Rik; AV050852; 1810015F01Rik; 9430006E19Rik; Gabpb2-1; 5830427M07	A430024B14Rik; AV050852; 1810015F01Rik; 9430006E19Rik; Gabpb2-1; 5830427M07
Mus musculus	RefSeq	ILMN_187238	ILMN_246048	GABPB2	NM_029885.1	NM_029885.1		213054	124301211	NM_029885.1	Gabpb2	NP_084161.1	ILMN_2442384	006060167	S	420	GGCTGTACTGGGACTTGAACCTAGAGCCTTGCACATATAAAAAGTGTTCT	3	-	95012798-95012847	3qF2.1	Mus musculus GA repeat binding protein, beta 2 (Gabpb2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	A430024B14Rik; AV050852; 1810015F01Rik; 9430006E19Rik; Gabpb2-1; 5830427M07	A430024B14Rik; AV050852; 1810015F01Rik; 9430006E19Rik; Gabpb2-1; 5830427M07
Mus musculus	RefSeq	ILMN_197451	ILMN_197451	LOC380891	XM_358454.1	XM_358454.1			38075915	XM_358454.1	LOC380891		ILMN_1259096	006620039	S	922	GTGGATGGCCACAGAGAAGTCAATCCATGCCTTCCAGAGAAGGAGGGTGC										
Mus musculus	RefSeq	ILMN_223689	ILMN_223689	ATOH1	NM_007500.3	NM_007500.3		11921	142349947	NM_007500.3	Atoh1	NP_031526.1	ILMN_2767705	005290408	S	1878	AGTGTCAAAGGCATTTGGTCAATTTTATTTTGCTTTGTTAACATTAGAAA	6	+	64681028-64681077	6qC1	Mus musculus atonal homolog 1 (Drosophila) (Atoh1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of auditory hair cell differentiation [goid 45609] [evidence IDA]; Process by which a cell becomes capable of differentiating autonomously into an auditory hair cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42667] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into an auditory hair cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 42668] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA that is assembled into chromatin [goid 31490] [evidence IDA]	MATH-1; Math1; Hath1	MATH-1; Math1; Hath1
Mus musculus	RefSeq	ILMN_214983	ILMN_214983	ARID3B	NM_019689.2	NM_019689.2		56380	118130594	NM_019689.2	Arid3b	NP_062663.1	ILMN_1238558	001240484	S	3675	ACTAGGGCTTTGGCCCAAGTGGCGCTTCCCCCGCAGGTATAGTCCTGAAG	9	-	57638385-57638434	9qB	Mus musculus AT rich interactive domain 3B (BRIGHT-like) (Arid3b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC59291; Bdp; Dri2	MGC59291; Bdp; Dri2
Mus musculus	RefSeq	ILMN_213704	ILMN_213704	POLR3K	NM_025901.2	NM_025901.2		67005	31560205	NM_025901.2	Polr3k	NP_080177.1	ILMN_2842930	002230563	S	2161	TGGGATAACTTGTCTAATCTAGGTGGGCAGCTTGTATCATCGATTGACTC	2	+	181799558-181799571	2qH4	Mus musculus polymerase (RNA) III (DNA directed) polypeptide K (Polr3k), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C11; 1500004O14Rik; RPC10; 12.3kDa; RPC11; AI196849; AU014893	C11; 1500004O14Rik; RPC10; 12.3kDa; RPC11; AI196849; AU014893
Mus musculus	RefSeq	ILMN_189213	ILMN_257523	SLC25A35	NM_028048.2	NM_028048.2		71998	142354306	NM_028048.2	Slc25a35	NP_082324.1	ILMN_1258728	005220053	S	1553	CACTCCTCTGTTCTCCTAGGGTTGAGTCACTGAGTGGGTCTTGCTTTAAA	11	+	68785743-68785792	11qB3	Mus musculus solute carrier family 25, member 35 (Slc25a35), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP23-396M19.7; 1810012H11Rik	RP23-396M19.7; 1810012H11Rik
Mus musculus	RefSeq	ILMN_207459	ILMN_207459	PIRA1	NM_011087.1	NM_011087.1		18722	6755063	NM_011087.1	Pira1	NP_035217.1	ILMN_2655499	000010131	S	3135	CAGTACTAGACGGCTCACAAATATACAGTTCTATTTACCAAGGATTCCTG	7	-	3683490-3683539	7qA1	Mus musculus paired-Ig-like receptor A1 (Pira1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PIR-A1; 6M21; Pir; Ly89	PIR-A1; 6M21; Pir; Ly89
Mus musculus	RefSeq	ILMN_207459	ILMN_207459	PIRA1	NM_011087.1	NM_011087.1		18722	6755063	NM_011087.1	Pira1	NP_035217.1	ILMN_2587721	005220356	I	1492	TGCTATGGAGCACACAACCTTTCCTCTGAGTGGTCAGCCTCCAGTGAGCC	7	-	3687937-3687986	7qA1	Mus musculus paired-Ig-like receptor A1 (Pira1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PIR-A1; 6M21; Pir; Ly89	PIR-A1; 6M21; Pir; Ly89
Mus musculus	RefSeq	ILMN_260096	ILMN_260096	SERPINH1	NM_009825.1	NM_009825.1		12406	6753303	NM_009825.1	Serpinh1	NP_033955.1	ILMN_2822850	004850221	S	1960	TGCCCATCCTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGAGACAGCG	7	-	106494132-106494181	7qE2	Mus musculus serine (or cysteine) peptidase inhibitor, clade H, member 1 (Serpinh1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32964] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IMP]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an unfolded protein [goid 51082] [evidence IDA]	Serpinh2; Hsp47; colligin; BERF-1; gp46; J6; Cbp2; Cbp1	Serpinh2; Hsp47; colligin; BERF-1; gp46; J6; Cbp2; Cbp1
Mus musculus	MEEBO	ILMN_209703	ILMN_209703	4930408F14RIK	scl0074851.1_40				38086398	XM_356334	4930408F14Rik		ILMN_1258497	002190639	S	670	CAGCTTTTATATTACTTATGAGAGAGATCCCATATTATACACGTACCAGC										
Mus musculus	RefSeq	ILMN_232083	ILMN_232083	1190007F08RIK	NM_001033144.1	NM_001033144.1		68859	85701593	NM_001033144.1	1190007F08Rik	NP_001028316.1	ILMN_2893564	001690553	S	594	CTGGGGATAGCCATGAAGGTGCTGGGTGGAGTGGCCCTCTTCTGGATCAT	4	-	152867174-152867223	4qE2	Mus musculus RIKEN cDNA 1190007F08 gene (1190007F08Rik), mRNA. XM_921339 XM_921348 XM_921353				2700009I11Rik; 0610011H04Rik	2700009I11Rik; 0610011H04Rik
Mus musculus	RefSeq	ILMN_197265	ILMN_197265	LOC380854	XM_354759.1	XM_354759.1			38074876	XM_354759.1	LOC380854		ILMN_2527514	005080519	S	964	GGAGAGAAACCCTGCAAGTGTGATAAATGTGGCAAGGCCTTCCGCTTTCC										
Mus musculus	RefSeq	ILMN_221270	ILMN_221270	OLFR1423	NM_146680.1	NM_146680.1		258675	33239021	NM_146680.1	Olfr1423	NP_666891.1	ILMN_1246989	003850370	S	611	GCCTGGTCACTACCCTATGGTTTATCTTCCTTCTGGTGTCCTACATGGTC	19	-	12110570-12110619	19qA	Mus musculus olfactory receptor 1423 (Olfr1423), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR239-3	MOR239-3
Mus musculus	Riken	ILMN_202144	ILMN_202144	PCP2	ri|2900053A13|ZX00069K17|AK013674|332					AK013674	Pcp2		ILMN_2547346	001430138	S	30	GAGCGAGATGGGGGTGAAGCTGGAGGTGTTTCGGATGTCCCTCTACCTCA							The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	Riken	ILMN_206320	ILMN_206320	MYLA	ri|D330013N04|PX00191A17|AK084544|3273					AK084544	Myla		ILMN_1252533	004900373	S	2934	CCTAGGAAGGGCAGGGTTTATTCGGCTTACAGCTCTCAGGTCCCAGGTCC										
Mus musculus	MEEBO	ILMN_188978	ILMN_188978	TRNT1	scl057870.1_61				33859691	NM_027296	Trnt1		ILMN_1243843	005260072	S	1	CCTAAGAGATTCATGGAGCAAAGGCAGGCTTCATTTTTAGCATTGCCGAC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence ISO]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + tRNA(n) = diphosphate + tRNA(n+1) [goid 4810] [evidence IEA]; Catalysis of the reaction: tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate [goid 9022] [evidence ISO]		
Mus musculus	RefSeq	ILMN_220688	ILMN_220688	ST6GALNAC3	NM_011372.2	NM_011372.2		20447	118130191	NM_011372.2	St6galnac3	NP_035502.1	ILMN_3162403	007570148	S	3649	GCTCCTGTTGGCCCTGCAGGTACTAGTCCACCGAAAGATTTTATCCACAC	3	-	152865659-152865708	3qH3	Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 (St6galnac3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]	Siat7c	Siat7c
Mus musculus	MEEBO	ILMN_195116	ILMN_195116	IGHV1S119_L33961_IG_HEAVY_VARIABLE_1S119_14	IGHV1S119_L33961_Ig_heavy_variable_1S119_14						IGHV1S119_L33961_Ig_heavy_variable_1S119_14		ILMN_2512738	002000465	S	20	TCAGGAACTGCAGGTGTCCTCTCTGAGGTCCTGCTGCAACAGTCTGGACC										
Mus musculus	RefSeq	ILMN_198289	ILMN_325147	9630014M24RIK	XR_035375.1	XR_035375.1		381155	149269783	XR_035375.1	9630014M24Rik		ILMN_2531153	007200156	S	508	GGCGGCGATCTGTTGGAGAGCCAATCTTAGTATTTCAGAGGCAGAGACAG	18	+	38802217-38802266	18qB3	PREDICTED: Mus musculus RIKEN cDNA 9630014M24 gene (9630014M24Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_249108	ILMN_249108	ARMCX6	NM_001007578.1	NM_001007578.1		278097	56090482	NM_001007578.1	Armcx6	NP_001007579.1	ILMN_3012253	005220228	I	1551	GCCCTGCAGCCTTCTTCATGTGGTAAAGGGTAAGGGGCTCCCCGTGGCCA	X	-	131283420-131283469	XqE3	Mus musculus armadillo repeat containing, X-linked 6 (Armcx6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC27863; AW060994	MGC27863; AW060994
Mus musculus	RefSeq	ILMN_249108	ILMN_249108	ARMCX6	NM_001007578.1	NM_001007578.1		278097	56090482	NM_001007578.1	Armcx6	NP_001007579.1	ILMN_3082808	000010390	A	586	TCACAGCAATGGCTCGACCCTGGAGTGAGGATGGGGACTGGGATGAACCT	X	-	131284385-131284434	XqE3	Mus musculus armadillo repeat containing, X-linked 6 (Armcx6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC27863; AW060994	MGC27863; AW060994
Mus musculus	MEEBO	ILMN_193493	ILMN_193493	BC019943	scl33936.8.1_33				31542189	NM_144927	BC019943		ILMN_2611402	000650494	S	2809	CCACAAGCCATTCTTTATCCCACAGAGCTCACCTCAAAGTCACTCAGGTC										
Mus musculus	MEEBO	ILMN_213440	ILMN_213440	ASB4	scl30418.7_5	NM_023048.4			40254405	NM_023048.4	Asb4		ILMN_2748994	002570328	S	1198	GTGCCATTCGAAAAGCGCTACACAACAGATGCCACAAAGCAATCCCTATG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]			
Mus musculus	RefSeq	ILMN_201475	ILMN_244097	LOC669253	XM_974035.1	XM_974035.1		669253	94412186	XM_974035.1	LOC669253	XP_979129.1	ILMN_1238163	005260370	S	526	GAATTCATAGAAGATAAGGATTCCCTACAGGTGAGTCCCAGACACAGCTG					PREDICTED: Mus musculus similar to Spetex-2F protein (LOC669253), mRNA.					
Mus musculus	RefSeq	ILMN_217625	ILMN_217625	MAG	NM_010758.2	NM_010758.2		17136	118130141	NM_010758.2	Mag	NP_034888.1	ILMN_1237021	000160465	S	2332	TCCATGTTATTTATTGCTATCCCTTTCCTGGTCTCCTGTCCCTTACCTGG	7	-	31684247-31684296	7qB1	Mus musculus myelin-associated glycoprotein (Mag), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC123387; siglec-4a; Gma	MGC123387; siglec-4a; Gma
Mus musculus	Riken	ILMN_204682	ILMN_204682	OPHN1	ri|A330019G01|PX00130D09|AK039304|3402					AK039304	Ophn1		ILMN_1218910	002120487	S	3265	GTGGGCATACAGGGTCATCCTCTAGCTTCCAAGAGCCTTGCTGATTTACC						The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]		
Mus musculus	RefSeq	ILMN_220180	ILMN_220180	NDUFC2	NM_024220.1	NM_024220.1		68197	18859596	NM_024220.1	Ndufc2	NP_077182.1	ILMN_1251341	006960180	S	335	TTAAAACGTCAAAACTATTTGTATGCTGTGAAGGACCATGACATGTTTGG	7	+	104555444-104555493	7qE1	Mus musculus NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2 (Ndufc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]	G1; R75094; 2010300P09Rik; 1810004I06Rik	G1; R75094; 2010300P09Rik; 1810004I06Rik
Mus musculus	RefSeq	ILMN_220180	ILMN_220180	NDUFC2	NM_024220.1	NM_024220.1		68197	18859596	NM_024220.1	Ndufc2	NP_077182.1	ILMN_2976591	002340709	S	3	CACGCGTCCGGCGCGGAGGAGGACGGTAGCTCGGTCACGGCGTTTGAAGT	7	+	104548604-104548653	7qE1	Mus musculus NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2 (Ndufc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]	G1; R75094; 2010300P09Rik; 1810004I06Rik	G1; R75094; 2010300P09Rik; 1810004I06Rik
Mus musculus	RefSeq	ILMN_223111	ILMN_223111	AW544981	NM_145986.1	NM_145986.1		213956	22122434	NM_145986.1	AW544981	NP_666098.1	ILMN_2759499	002360743	S	2909	CACCGTGGCTTCCCAAGCCTTTGTGAGGATTAAACACTTCTGGTAAGTGC	15|NT_039622.1	+	80530273-80530322	15qE1	Mus musculus expressed sequence AW544981 (AW544981), mRNA.				MGC27770	MGC27770
Mus musculus	RefSeq	ILMN_217072	ILMN_217072	GCNT2	NM_023887.3	NM_023887.3		14538	39995101	NM_023887.3	Gcnt2	NP_076376.3	ILMN_2678801	000620398	S	335	CCAATATTTCAGTCTTAGCGGAAGTCTGCTTGCAGATGTTCAGTGGGGAG	13	+	40955835-40955884	13qA3.3	Mus musculus glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (Gcnt2), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R [goid 8109] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IDA]	IGnT; IGnTC; IGnTB; IGnTA; 5330430K10Rik	IGnT; IGnTC; IGnTB; IGnTA; 5330430K10Rik
Mus musculus	RefSeq	ILMN_215538	ILMN_215538	CD59B	NM_181858.1	NM_181858.1		333883	32469506	NM_181858.1	Cd59b	NP_862906.1	ILMN_2660766	005390193	S	220	TTGCTCTCCTAACCTGGATTCCTGTCTCTATGCTGTAGCCGGAAGGCAAG	2	+	103919076-103919093:103919087-103919104:103919105-103919118	2qE2	Mus musculus CD59b antigen (Cd59b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of cytolysis [goid 45918] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of complement activation [goid 45916] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade [goid 1971] [evidence IDA]			
Mus musculus	RefSeq	ILMN_215538	ILMN_215538	CD59B	NM_181858.1	NM_181858.1		333883	32469506	NM_181858.1	Cd59b	NP_862906.1	ILMN_2792143	004220253	S	321	GCCGATTAGACGTGGCAGGCATACAAAGCAAATGCTGTCAGTGGGACTTG	2	+	103921158-103921207	2qE2	Mus musculus CD59b antigen (Cd59b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of cytolysis [goid 45918] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of complement activation [goid 45916] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade [goid 1971] [evidence IDA]			
Mus musculus	RefSeq	ILMN_218561	ILMN_254895	RBM22	NM_025776.2	NM_025776.2		66810	141802908	NM_025776.2	Rbm22	NP_080052.1	ILMN_2697305	006840072	S	1748	GTGGCATAAAAGTGATTTAACTAATTTGAAGTCATACCCTCAGAGAGGGT	18	+	60732052-60732101	18qD3	Mus musculus RNA binding motif protein 22 (Rbm22), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	8430430L24Rik; MGC91134	8430430L24Rik; MGC91134
Mus musculus	RefSeq	ILMN_215492	ILMN_215492	TIMM50	NM_025616.3	NM_025616.3		66525	146134986	NM_025616.3	Timm50	NP_079892.1	ILMN_1241845	004640408	S	1106	TGAGCCTTGGGCCCCAGCCCTTACACGGCAAAGTGTGGACAGCTATGTGT				7qA3	Mus musculus translocase of inner mitochondrial membrane 50 homolog (yeast) (Timm50), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence ISA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence ISA]; Interacting selectively with the interleukin-2 receptor [goid 5134] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	TIM50L; 2810403L02Rik; AU015082	TIM50L; 2810403L02Rik; AU015082
Mus musculus	RefSeq	ILMN_201867	ILMN_256823	PGRMC2	XM_911696.2	XM_911696.2		70804	94369376	XM_911696.2	Pgrmc2	XP_916789.1	ILMN_1220641	002650215	S	2318	AGAAGCTCGGGTTCGATGGGAAGCAGAGGGCGAGCGGTGCTACACTCGTA				3qB	PREDICTED: Mus musculus progesterone receptor membrane component 2, transcript variant 3 (Pgrmc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221044	ILMN_312024	2610017I09RIK	XR_035175.1	XR_035175.1		66297	149233939	XR_035175.1	2610017I09Rik		ILMN_2730311	006280475	S	372	GCCTTCATCAAGTGGTATGAAGGCCCTACCCCAACAGAAAGTGCTGATGT				1qB	PREDICTED: Mus musculus RIKEN cDNA 2610017I09 gene (2610017I09Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_211549	ILMN_211549	4930518C23RIK	NM_175670.2	NM_175670.2		319210	31342296	NM_175670.2	4930518C23Rik	NP_783601.1	ILMN_2616962	004730215	S	2004	GGGCACTTGTGGTCTTGGCAGTCACTGCTGTGGGAGATTTGTGTATGTGC				3qE1	Mus musculus RIKEN cDNA 4930518C23 gene (4930518C23Rik), mRNA.					
Mus musculus	MEEBO	ILMN_222768	ILMN_222768	LDB2	scl0016826.1_74	NM_010698.2			13443027	NM_010698.2	Ldb2		ILMN_2754435	002140039	S	1631	CTGTGCAAACGTGCTCAGGATCTCAGTAACGGGCCGACCCCCAACTACAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218369	ILMN_218369	ZFP385C	NM_177790.3	NM_177790.3		278304	142374044	NM_177790.3	Zfp385c	NP_808458.1	ILMN_1218859	003310736	S	2597	GCCATTCCCCCATTCGACATGGGATTTCACCAGGATCCACCTATATCCCC	11	-	100488976-100489025	11qD	Mus musculus zinc finger protein 385C (Zfp385c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193500	ILMN_244225	FAM109A	NM_175474.3	NM_175474.3		231717	142385230	NM_175474.3	Fam109a	NP_780683.1	ILMN_2668178	000450600	S	2269	CTGATTCTGGGGCTAGGAGAGTTATCAATCATGGACAGGGTATGAGGGCC	5	+	122304542-122304591	5qF	Mus musculus family with sequence similarity 109, member A (Fam109a), mRNA.				AU017694	AU017694
Mus musculus	RefSeq	ILMN_222022	ILMN_222022	FABP6	NM_008375.1	NM_008375.1		16204	6680440	NM_008375.1	Fabp6	NP_032401.1	ILMN_2826304	002940646	S	247	ACCGTGAAGATGGAGGGTGGCAAGGTGGTGGCAGAGTTCCCCAACTATCA	11	-	43411003-43411052	11qB1.1	Mus musculus fatty acid binding protein 6, ileal (gastrotropin) (Fabp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence TAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	ILBP; ILBP3; Illbp; I-15P; RP23-26M1.3; I-BABP	ILBP; ILBP3; Illbp; I-15P; RP23-26M1.3; I-BABP
Mus musculus	RefSeq	ILMN_210832	ILMN_210832	TMEM144	NM_027495.2	NM_027495.2		70652	31560097	NM_027495.2	Tmem144	NP_081771.2	ILMN_2759730	000020706	S	839	CAGAACCGAGGACCGGAGTGCGGATTCCTCCTGGGTGGATAGACTTTCTA	3	-	79912768-79912817	3qE3	Mus musculus transmembrane protein 144 (Tmem144), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5730537D05Rik; 1110057I03Rik	5730537D05Rik; 1110057I03Rik
Mus musculus	RefSeq	ILMN_210832	ILMN_210832	TMEM144	NM_027495.2	NM_027495.2		70652	31560097	NM_027495.2	Tmem144	NP_081771.2	ILMN_2789346	000630161	S	2053	GCACACATACGTGTGTGCATGGTTTCAGATTTGGACACATTCTAGAGTTG	3	-	79899269-79899318	3qE3	Mus musculus transmembrane protein 144 (Tmem144), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5730537D05Rik; 1110057I03Rik	5730537D05Rik; 1110057I03Rik
Mus musculus	RefSeq	ILMN_262012	ILMN_262012	PTPRQ	NM_001081432.1	NM_001081432.1		237523	124487426	NM_001081432.1	Ptprq	NP_001074901.1	ILMN_3077866	006270609	I	6849	CTAGTAGCTGAACTGAGGAGTGAGAGAATGTGCATGGTGCAGAACCTGGC	10	-	106954966-106954968:106960556-106960602	10qD1	Mus musculus protein tyrosine phosphatase, receptor type, Q (Ptprq), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214247	ILMN_214247	TMEM140	NM_197986.2	NM_197986.2		68487	141802935	NM_197986.2	Tmem140	NP_932103.1	ILMN_2645901	002690379	S	2522	TTTCTCCACCCCACACCTCAGGATCAGGACCCACTAGGGACAGATGCAGG	6	+	34824854-34824903	6qB1	Mus musculus transmembrane protein 140 (Tmem140), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110007F12Rik	1110007F12Rik
Mus musculus	RefSeq	ILMN_220114	ILMN_220114	POLRMT	NM_172551.2	NM_172551.2		216151	142362326	NM_172551.2	Polrmt	NP_766139.1	ILMN_2717777	007380041	S	3615	GGTGATAAGATCCACCTACTTTTTCAGCTGACCCACGCCATGCGGTCCCT	10	-	79198959-79198978:79198979-79199008	10qC1	Mus musculus polymerase (RNA) mitochondrial (DNA directed) (Polrmt), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC118526; 4932416K13; 1110018N15Rik	MGC118526; 4932416K13; 1110018N15Rik
Mus musculus	RefSeq	ILMN_201235	ILMN_201235	LOC384964	XM_357965.1	XM_357965.1			38090027	XM_357965.1	LOC384964		ILMN_2541571	000070563	S	118	CCCCAGGATCATGCTCAAGAGACTCAGAGGGAGCACCCTCAAAAACTTCG										
Mus musculus	RefSeq	ILMN_215799	ILMN_239344	ANKRD26	NM_001081112.1	NM_001081112.1		232339	124487432	NM_001081112.1	Ankrd26	NP_001074581.1	ILMN_2663725	005550438	S	1530	GCATGAGTGGATCAAGAAGCTTTAAAATGGCTAAACTAGAGGAGTCAAGA	6	-	118490496-118490545	6qF1	Mus musculus ankyrin repeat domain 26 (Ankrd26), mRNA.	A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organ of an organism [goid 46621] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids [goid 19216] [evidence IMP]; Any process that modulates the rate, frequency or extent of the behavior associated with the intake of food [goid 60259] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1074; 5730521P14Rik; BC008111	mKIAA1074; 5730521P14Rik; BC008111
Mus musculus	RefSeq	ILMN_211457	ILMN_211457	1810010H24RIK	XM_286373.6	XM_286373.6		69066	149262547	XM_286373.6	1810010H24Rik	XP_286373.6	ILMN_2616099	006770327	S	849	GCCAAGTGCAAAAACTATTACATTTCAAGGGCTAATTCAAGCAAAACACC	11	+	106891506-106891555	11qE1	PREDICTED: Mus musculus RIKEN cDNA 1810010H24 gene (1810010H24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209289	ILMN_316117	YY2	NM_001098723.1	NM_001098723.1		100073351	148922952	NM_001098723.1	Yy2	NP_001092193.1	ILMN_2594376	004880189	S	812	GAAAAAGAAGATCCCATAGCTGAAGAACAGGCTGGTGAGTCACCCCCCGA					Mus musculus Yy2 transcription factor (Yy2), mRNA.					
Mus musculus	RefSeq	ILMN_221127	ILMN_312738	LOC100045688	XM_001472622.1	XM_001472622.1		100045688	149274501	XM_001472622.1	LOC100045688	XP_001472672.1	ILMN_1213122	004640129	S	508	CAAGAAATTCAAGCTGAAGAGATGTAACATTGGTTCTGTATAATTGATAG					PREDICTED: Mus musculus similar to coiled-coil-helix-coiled-coil-helix domain containing 2 (LOC100045688), mRNA.					
Mus musculus	MEEBO	ILMN_193719	ILMN_193719	1700030N03RIK	scl0070011.1_174						1700030N03Rik		ILMN_1239871	006180246	S	1	CATCCACAAGCCTGGGACACACATCAACCTGAATGCCCCACCCCTTTTCT										
Mus musculus	Riken	ILMN_205427	ILMN_205427	E330020G21RIK	ri|E330020G21|PX00211P24|AK054368|2866					AK054368	E330020G21Rik		ILMN_1248022	005270687	S	2561	CATGTAGTGCATCCAGAGACCCCACGGGTAAGATGCCTCCTGAAAGCTGA										
Mus musculus	RefSeq	ILMN_199064	ILMN_199064	LOC327803	XM_286290.2	XM_286290.2			38090691	XM_286290.2	LOC327803		ILMN_1238195	002690056	S	209	GAACCCAGGAGGCATTGCTAAGATCAGGGGGATATCTGTGATGTCCATAC										
Mus musculus	RefSeq	ILMN_212879	ILMN_246407	CEP76	NM_001081073.1	NM_001081073.1		225659	124486732	NM_001081073.1	Cep76	NP_001074542.1	ILMN_1253298	006980184	S	3097	CGGATCAGCCTATAAGTGACTAATGTCATTGACAAAAATCATAAGAGGCC	18	-	67777883-67777932	18qE1	Mus musculus centrosomal protein 76 (Cep76), mRNA.				6230425F05Rik; 9630013E05	6230425F05Rik; 9630013E05
Mus musculus	Riken	ILMN_205191	ILMN_205191	D030031C12RIK	ri|D030031C12|PX00179D14|AK050892|2272					AK050892	D030031C12Rik		ILMN_2570680	004230373	S	2061	GCTACACCCAGGAAATGTCAACAGTATGGTCACCTGAACAGGGATACGGC										
Mus musculus	RefSeq	ILMN_212998	ILMN_212998	BUB1	NM_009772.1	NM_009772.1		12235	30840981	NM_009772.1	Bub1	NP_033902.1	ILMN_2632462	004490068	S	2974	CTCTTTGGCTCTTACATGAAAGTAAAAAATGAAGGAGGAGTCTGGAAACC	2	-	127640410-127640459	2qF1	Mus musculus budding uninhibited by benzimidazoles 1 homolog (S. cerevisiae) (Bub1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	C80208; AL022991; Bub1a; D2Xrf87	C80208; AL022991; Bub1a; D2Xrf87
Mus musculus	RefSeq	ILMN_186670	ILMN_227460	OXTR	NM_001081147.1	NM_001081147.1		18430	124487242	NM_001081147.1	Oxtr	NP_001074616.1	ILMN_1215559	002100731	S	2308	GGGTGCACAATTCTGAGAACGTATTTAAAATTAATAAAGCAAACTCCAGC	6	-	112425888-112425937	6qE3	Mus musculus oxytocin receptor (Oxtr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which the force of blood traveling through the circulatory system is increased [goid 45777] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]; Combining with oxytocin to initiate a change in cell activity [goid 4990] [evidence IEA]	OTR	OTR
Mus musculus	RefSeq	ILMN_223187	ILMN_223187	PVRL3	NM_021497.1	NM_021497.1		58998	12957495	NM_021497.1	Pvrl3	NP_067472.1	ILMN_1233119	006420577	S	1601	GAGTGATCAGACTTTGTGTACAAATTAGAAAAGTGATGGCTACTGTGAAT	16	-	46436109-46436158	16qB5	Mus musculus poliovirus receptor-related 3 (Pvrl3), transcript variant gamma, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form [goid 60042] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA407785; AW538082; AU016832; 2610301B19Rik; 4921513D19Rik; 3000002N23Rik	AA407785; AW538082; AU016832; 2610301B19Rik; 4921513D19Rik; 3000002N23Rik
Mus musculus	RefSeq	ILMN_255240	ILMN_255240	ALS2CR13	NM_001037725.1	NM_001037725.1		72750	83582791	NM_001037725.1	Als2cr13	NP_001032814.1	ILMN_3084791	004480341	A	5150	CCTTAATGCTGGTGTGGGGGGTGTCAAACTGGACCAATGGAAATGCTGGA	1	+	59929510-59929559	1qC2	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 13 (human) (Als2cr13), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6330416D14Rik; 2810425F24Rik; MGC90831	6330416D14Rik; 2810425F24Rik; MGC90831
Mus musculus	RefSeq	ILMN_255240	ILMN_255240	ALS2CR13	NM_001037725.1	NM_001037725.1		72750	83582791	NM_001037725.1	Als2cr13	NP_001032814.1	ILMN_3013787	005820427	I	49	TGGTCCTGAAGTCAGGCTACGTCACCCGCTGGCTCAGGCCTTCCCTCGGG	1	+	59857600-59857649	1qC2	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 13 (human) (Als2cr13), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6330416D14Rik; 2810425F24Rik; MGC90831	6330416D14Rik; 2810425F24Rik; MGC90831
Mus musculus	RefSeq	ILMN_210600	ILMN_210600	EG215714	NM_175447.3	NM_175447.3		215714	141803322	NM_175447.3	EG215714	NP_780656.1	ILMN_2607287	006020682	S	2477	GAAAGCAGGTTAAAGTCTCACTTGTTTTCTACAGCGTCAGCAAGTGTCTG	1	+	137496386-137496435	1qE4	Mus musculus predicted gene, EG215714 (EG215714), mRNA.					
Mus musculus	RefSeq	ILMN_213960	ILMN_213960	4930550C14RIK	NM_029247.3	NM_029247.3		75311	146141155	NM_029247.3	4930550C14Rik	NP_083523.1	ILMN_1250814	004180161	S	1005	GGATTCCCTTTTCTGAGCGATGGACCTACCTTCAAGCCCACTTTCCAGCG				9qA5.3	Mus musculus RIKEN cDNA 4930550C14 gene (4930550C14Rik), mRNA.				AU017961	AU017961
Mus musculus	RefSeq	ILMN_217636	ILMN_240430	RXFP1	NM_212452.1	NM_212452.1		381489	47059054	NM_212452.1	Rxfp1	NP_997617.1	ILMN_2685751	000670392	S	1880	CCAAACGCTTTTTCTTTATCGTTTTCACCGACGCGCTGTGCTGGATTCCC	3	-	79452040-79452089	3qE3	Mus musculus relaxin/insulin-like family peptide receptor 1 (Rxfp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The reproductive process in which the parent is separated from its offspring either by giving birth to live young or by laying eggs [goid 7567] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any hormone, naturally occurring substances secreted by specialized cells that affect the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42562] [evidence IDA]	Lgr7; Gm1018	Lgr7; Gm1018
Mus musculus	MEEBO	ILMN_185211	ILMN_185211	E030031F02RIK	scl26915.10.1656_1				51710803	XM_485558	E030031F02Rik		ILMN_2425115	006100767	S	4	AGTCAAGGGTTCTGACACCCTAACCCTGTAACGAGCTAGAAGACTAACAG										
Mus musculus	RefSeq	ILMN_258373	ILMN_258373	CNOT2	NM_001037846.1	NM_001037846.1		72068	83745107	NM_001037846.1	Cnot2	NP_001032935.1	ILMN_3145881	002680521	A	119	GTACTGTGAGGAAAGGACACGACTCTATGGTGAGGACTGATGGACATACA	10	-	115953165-115953190:115953191-115953214	10qD2	Mus musculus CCR4-NOT transcription complex, subunit 2 (Cnot2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650
Mus musculus	RefSeq	ILMN_258373	ILMN_258373	CNOT2	NM_001037846.1	NM_001037846.1		72068	83745107	NM_001037846.1	Cnot2	NP_001032935.1	ILMN_3067780	001770368	I	2596	GCCCTGTGCACTAAAGGGCCAGATTTTCAGCAGCCAAGGACATCCATACC	10	-	115889430-115889479	10qD2	Mus musculus CCR4-NOT transcription complex, subunit 2 (Cnot2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650
Mus musculus	MEEBO	ILMN_216795	ILMN_216795	SH3BP1	scl47762.20_88	NM_009164.1			6677930	NM_009164.1	Sh3bp1		ILMN_2675449	006200576	S	1760	TCTGCCTCGCCGTCTGGTGGGCACCAGCCTCCGGGCCCCTACCATGCCTC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IPI]		
Mus musculus	RefSeq	ILMN_214254	ILMN_214254	NLRP5	NM_011860.2	NM_011860.2		23968	85362738	NM_011860.2	Nlrp5	NP_035990.1	ILMN_2646011	003290358	S	2008	GGTGGATATCAGAGACCTCCTCTCGGTAGATAATACTCTCGAGCTGTGCC	7	+	24203812-24203861	7qA3	Mus musculus NLR family, pyrin domain containing 5 (Nlrp5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Op1; Nalp5; PAN11; Mater	Op1; Nalp5; PAN11; Mater
Mus musculus	RefSeq	ILMN_214254	ILMN_214254	NLRP5	NM_011860.2	NM_011860.2		23968	85362738	NM_011860.2	Nlrp5	NP_035990.1	ILMN_2696556	005720324	S	3374	GAAGATGACCGAAACTGGTGGAAAAACTGAAGACATGAGCCCCCTCTCCT	7	+	24226803-24226832:24226833-24226852	7qA3	Mus musculus NLR family, pyrin domain containing 5 (Nlrp5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Op1; Nalp5; PAN11; Mater	Op1; Nalp5; PAN11; Mater
Mus musculus	RefSeq	ILMN_214254	ILMN_214254	NLRP5	NM_011860.2	NM_011860.2		23968	85362738	NM_011860.2	Nlrp5	NP_035990.1	ILMN_3152906	007160553	A	3404	AGACATGAGCCCCCTCTCCTTCACGTCCTAGCACTGCAGTATCTGTGAAA	7	+	24226833-24226882	7qA3	Mus musculus NLR family, pyrin domain containing 5 (Nlrp5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Op1; Nalp5; PAN11; Mater	Op1; Nalp5; PAN11; Mater
Mus musculus	MEEBO	ILMN_221395	ILMN_221395	RFC2	scl27145.4.1_19				50263039	NM_020022	Rfc2		ILMN_2749484	004730491	S	1160	CTCCACTGATGGAACTAGGAGAGTCTTTGTTGTGGGAGATGTGCCTCAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214497	ILMN_214497	CLCC1	NM_145543.1	NM_145543.1		229725	21704069	NM_145543.1	Clcc1	NP_663518.1	ILMN_1239653	006110021	S	2544	CCTAGCTAGCACTCTTTCTGTGCACGCAGGTGTCCTTTGTTGTTGCAACC	3	+	108480667-108480716	3qF3	Mus musculus chloride channel CLIC-like 1 (Clcc1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			Mclc	Mclc
Mus musculus	RefSeq	ILMN_220985	ILMN_220985	CEP55	NM_028760.1	NM_028760.1		74107	31745190	NM_028760.1	Cep55	NP_083036.1	ILMN_1243679	003710050	S	2318	TTGAAGAATGCCTTTAAGTGGCTGTATATTTTTACTCCTATTACCTGGCC	19	+	38148546-38148595	19qC2	Mus musculus centrosomal protein 55 (Cep55), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		2700032M20Rik; 1200008O12Rik	2700032M20Rik; 1200008O12Rik
Mus musculus	RefSeq	ILMN_200248	ILMN_200248	LOC386067	XM_359051.1	XM_359051.1			38081077	XM_359051.1	LOC386067		ILMN_2538092	001500044	S	12	GGGTATCCTGCTCCCAACTTCAAAAGCTACAGGTGTTATGCCAGATGGAC										
Mus musculus	MEEBO	ILMN_212368	ILMN_212368	FRMPD1	scl25475.13_629	XM_204152.2			38078284	XM_204152.2	Frmpd1		ILMN_2625610	001450541	S	5174	ACCTGCCCCTTCCAATGTTTACTACATAGAGTATTCAAATAAACTGCTGC						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_221454	ILMN_221454	4933403G17RIK	scl31631.1.2_288				51762774	XM_485891	4933403G17Rik		ILMN_2735849	003060427	S	1142	CCTTCCCGGGCCAGTCATTTAGTTGTGCTAAGTATTTTCTGTATCTGCGA										
Mus musculus	RefSeq	ILMN_215463	ILMN_215463	LIN54	NM_172714.1	NM_172714.1		231506	27370035	NM_172714.1	Lin54	NP_766302.1	ILMN_2793616	005960594	S	3616	GAAGCCTTTAACCTATCAGCCCCTTTCCTTCTGTGTGGTTCCAACTGAAC	5	-	100682569-100682618	5qE4	Mus musculus lin-54 homolog (C. elegans) (Lin54), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		KIAA2037; mKIAA2037; AI461788; 4832414L08	KIAA2037; mKIAA2037; AI461788; 4832414L08
Mus musculus	RefSeq	ILMN_197735	ILMN_321408	LOC381002	XR_035214.1	XR_035214.1		381002	149266346	XR_035214.1	LOC381002		ILMN_1220443	003710494	S	502	TCCTGCCCGGTAGACCCAGTCTTTCCACTGGTCACAGCTACCACAGCGAT				15qA1	PREDICTED: Mus musculus hypothetical LOC381002 (LOC381002), misc RNA.					
Mus musculus	RefSeq	ILMN_260574	ILMN_260574	AI314976	NM_207219.2	NM_207219.2		106821	110625731	NM_207219.2	AI314976	NP_997102.2	ILMN_2942000	001010048	S	378	GTCAACAAAAGAAGTCTGGAGAAGTGGCTGTTCTGAAGAGAGATGGGCGA				17qC	Mus musculus expressed sequence AI314976 (AI314976), mRNA.				AW558560	AW558560
Mus musculus	RefSeq	ILMN_191627	ILMN_191627	WDR37	NM_172445.2	NM_172445.2		207615	86476062	NM_172445.2	Wdr37	NP_766033.1	ILMN_1245927	000620474	S	2221	CTGTTCCGGTCCTGTAAAAGAAACCTGGATTTGCAACGTTTTGTGCAGAA	13	-	8804494-8804543	13qA1	Mus musculus WD repeat domain 37 (Wdr37), transcript variant 1, mRNA.				4933417A01Rik; mKIAA0982; AI481191; 3110035P10Rik; 6430603N07	4933417A01Rik; mKIAA0982; AI481191; 3110035P10Rik; 6430603N07
Mus musculus	RefSeq	ILMN_222844	ILMN_312441	LOC100044779	XR_030993.1	XR_030993.1		100044779	149265195	XR_030993.1	LOC100044779		ILMN_2755660	003140110	S	1182	GTGTATGTACCTAGCTGTACTATAAGTAGTTGGTTTGTATGAGATGGTTA					PREDICTED: Mus musculus similar to prothymosin alpha (LOC100044779), misc RNA.					
Mus musculus	RefSeq	ILMN_200831	ILMN_255733	PRRG1	XM_921217.3	XM_921217.3		546336	149271963	XM_921217.3	Prrg1	XP_926310.1	ILMN_1214039	005340524	S	694	GGCGTTCAGATTCGGTTTCCACTCGCCTTTCCAACTGTGATCCCCCACCT				XqB	PREDICTED: Mus musculus proline rich Gla (G-carboxyglutamic acid) 1, transcript variant 10 (Prrg1), mRNA.					
Mus musculus	RefSeq	ILMN_216470	ILMN_216470	CCDC77	NM_026028.3	NM_026028.3		67200	146135002	NM_026028.3	Ccdc77	NP_080304.1	ILMN_2671436	002630068	S	1878	TGGCACAGCTGCCCTGGCTGACTGCAGTCTCACCATCCTGCTAGCCTTGT				6qF1	Mus musculus coiled-coil domain containing 77 (Ccdc77), mRNA.				AV168274; 2700091N06Rik; 2400002C23Rik	AV168274; 2700091N06Rik; 2400002C23Rik
Mus musculus	RefSeq	ILMN_198573	ILMN_198573	LOC330689	XM_286083.1	XM_286083.1			28482642	XM_286083.1	LOC330689		ILMN_2532162	003870259	S	327	AGAGACCATGAAGAAACTCGATGACATTGATGTGACCAAAGTCCGTACCC										
Mus musculus	RefSeq	ILMN_220944	ILMN_220944	CDYL2	NM_029441.2	NM_029441.2		75796	124430753	NM_029441.2	Cdyl2	NP_083717.1	ILMN_2728967	001850241	S	1857	TTTGATTTTGTGTAAAGGTGGCAAACACAGCACCCTTGGCCTCCCTGTGC				8qE1	Mus musculus chromodomain protein, Y chromosome-like 2 (Cdyl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700029M19Rik; 4930453I21Rik	1700029M19Rik; 4930453I21Rik
Mus musculus	RefSeq	ILMN_190316	ILMN_190316	ZFP54	NM_011760.2	NM_011760.2		22712	124269707	NM_011760.2	Zfp54	NP_035890.2	ILMN_2469069	006980538	S	2216	CATGAGAGACAGGGGAAAGCCTTTAATAAAGTTTTAAATCTTACAATTTA	17	+	21572028-21572077	17qA3.2	Mus musculus zinc finger protein 54 (Zfp54), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Zfp-54; KRAB10; MGC91117; Zfp76; mszf83	Zfp-54; KRAB10; MGC91117; Zfp76; mszf83
Mus musculus	MEEBO	ILMN_196130	ILMN_196130	CCNH	scl43721.1.1_324						Ccnh		ILMN_2521908	005820519	S	7	AAGTTTAATATATTTTGATGTTTTCACATTGTACTATTTTTTTAAAAAGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence ISS]		
Mus musculus	RefSeq	ILMN_215554	ILMN_215554	RSPO2	NM_172815.1	NM_172815.1		239405	27370215	NM_172815.1	Rspo2	NP_766403.1	ILMN_2910230	006940035	S	2766	GGCTTCGCCCAAGTGAGAGCCACATCTTACATTTCTCTGTTGAATCGGAA	15	-	42851393-42851442	15qB3.1-qB3.2	Mus musculus R-spondin 2 homolog (Xenopus laevis) (Rspo2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	AA673245; D430027K22; 2610028F08Rik	AA673245; D430027K22; 2610028F08Rik
Mus musculus	RefSeq	ILMN_196486	ILMN_196486	2410072D24RIK	XM_357002.1	XM_357002.1			38083794	XM_357002.1	2410072D24Rik		ILMN_2757574	006450475	S	1163	GAGCGGCATTTCTTGGTGAATGGTAAGGACATCAATGTGTTGGTGAGGTG										
Mus musculus	RefSeq	ILMN_209547	ILMN_209547	LASP1	NM_010688.2	NM_010688.2		16796	31543111	NM_010688.2	Lasp1	NP_034818.1	ILMN_2879746	002190538	S	3312	CCCTCCTGGCCTTGTCCTTGGGATCATTTCTTTCTGGCCTGTTATGATTT	11	+	97654733-97654782	11qD	Mus musculus LIM and SH3 protein 1 (Lasp1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	SH3P6; AA408629; Def-4	SH3P6; AA408629; Def-4
Mus musculus	RefSeq	ILMN_209547	ILMN_209547	LASP1	NM_010688.2	NM_010688.2		16796	31543111	NM_010688.2	Lasp1	NP_034818.1	ILMN_2879745	006110730	S	2999	AACCCCATAATGCAAGAAGCCCCATGGTGAGCGACATAGGTTCTCCCCCC	11	+	97654420-97654469	11qD	Mus musculus LIM and SH3 protein 1 (Lasp1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	SH3P6; AA408629; Def-4	SH3P6; AA408629; Def-4
Mus musculus	RefSeq	ILMN_216260	ILMN_216260	MAD2L1BP	NM_025649.2	NM_025649.2		66591	142352597	NM_025649.2	Mad2l1bp	NP_079925.1	ILMN_2669087	000290592	S	721	TTTCAACCGAAACTGAACTACCGGGTGCCCAGCCGGGGCCACAAACTCAC	17	-	46285177-46285226	17qC	Mus musculus MAD2L1 binding protein (Mad2l1bp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence ISO]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mad2lbp; CMT2B; CMT2A; AW550977; 2510031P20Rik; C76045; AU018945; 0610009D16Rik; mKIAA0110; KIAA0110	Mad2lbp; CMT2B; CMT2A; AW550977; 2510031P20Rik; C76045; AU018945; 0610009D16Rik; mKIAA0110; KIAA0110
Mus musculus	RefSeq	ILMN_216260	ILMN_216260	MAD2L1BP	NM_025649.2	NM_025649.2		66591	142352597	NM_025649.2	Mad2l1bp	NP_079925.1	ILMN_1221616	005870066	S	882	CAATGGCTGAATTCTCTCCCATTCTCATGCTAGGGCACCCATCTTCCCAC	17	-	46285016-46285065	17qC	Mus musculus MAD2L1 binding protein (Mad2l1bp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence ISO]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mad2lbp; CMT2B; CMT2A; AW550977; 2510031P20Rik; C76045; AU018945; 0610009D16Rik; mKIAA0110; KIAA0110	Mad2lbp; CMT2B; CMT2A; AW550977; 2510031P20Rik; C76045; AU018945; 0610009D16Rik; mKIAA0110; KIAA0110
Mus musculus	Riken	ILMN_202952	ILMN_202952	RSDR1-PENDING	ri|A930024C19|PX00066H05|AK044571|1817					AK044571	Rsdr1-pending		ILMN_2553577	006760619	S	1559	ACTGCCCTGAGATTTACAATTCCTTCGGTGGCTGAGACTGAACTTTGGAG										
Mus musculus	RefSeq	ILMN_184898	ILMN_247095	UBAP1	NM_023305.3	NM_023305.3		67123	145966827	NM_023305.3	Ubap1	NP_075794.3	ILMN_2458274	000110162	S	2422	GTATCATTGGCCCTTTCCAGCACATGGGTGAGAAAACAGGCCACGACTTG				4qA5	Mus musculus ubiquitin-associated protein 1 (Ubap1), mRNA.				2700092A01Rik; Ubap; NAG20	2700092A01Rik; Ubap; NAG20
Mus musculus	RefSeq	ILMN_219583	ILMN_236367	CSF1R	NM_001037859.2	NM_001037859.2		12978	126723422	NM_001037859.2	Csf1r	NP_001032948.2	ILMN_2710819	003400369	S	3495	CCCGTCCCAAACTCTCGTGTTTCAATGGAAAGACTGATTTATGTCTCAAA	18	+	61290413-61290462	18qE1	Mus musculus colony stimulating factor 1 receptor (Csf1r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Csfmr; M-CSFR; CSF-1R; Fms; Fim-2; AI323359; CD115	Csfmr; M-CSFR; CSF-1R; Fms; Fim-2; AI323359; CD115
Mus musculus	RefSeq	ILMN_219583	ILMN_236367	CSF1R	NM_001037859.2	NM_001037859.2		12978	126723422	NM_001037859.2	Csf1r	NP_001032948.2	ILMN_1230485	000520647	S	2341	CCTGGTCAGGACTCCGAGGGAGACTCCAGCTACAAGAACATCCACCTGGA	18	+	61285423-61285472	18qE1	Mus musculus colony stimulating factor 1 receptor (Csf1r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Csfmr; M-CSFR; CSF-1R; Fms; Fim-2; AI323359; CD115	Csfmr; M-CSFR; CSF-1R; Fms; Fim-2; AI323359; CD115
Mus musculus	RefSeq	ILMN_222494	ILMN_222494	C230052I12RIK	NM_178643.3	NM_178643.3		101831	32129237	NM_178643.3	C230052I12Rik	NP_848758.1	ILMN_2994631	002140403	S	1339	CCAGAGACTCATTCCCAGCCGCAGCCAGCTGGAGCAGATTTGTACAAGAC	7	-	35101311-35101360	7qB2	Mus musculus RIKEN cDNA C230052I12 gene (C230052I12Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AW538696; AW124591	AW538696; AW124591
Mus musculus	Riken	ILMN_204116	ILMN_204116	B130044D17RIK	ri|B130044D17|PX00158C03|AK045185|1291					AK045185	B130044D17Rik		ILMN_1256229	004260373	S	988	CTTGATGGTAGGCACAGTGTTAAGAGCTTTCCTCTGAGGACTGCCTGCGG										
Mus musculus	RefSeq	ILMN_189985	ILMN_258929	EDNRA	NM_010332.2	NM_010332.2		13617	93102407	NM_010332.2	Ednra	NP_034462.1	ILMN_2674351	004040189	S	3526	GGGCCCTGGTAACTCTACTGGGCATTTTCCCAGATGTTTACAGACTGTGA	8	-	80186995-80187044	8qC1	Mus musculus endothelin receptor type A (Ednra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]; A decrease in the diameter of blood vessels, especially arteries, usually causing an increase in blood pressure [goid 42310] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence TAS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence TAS]; Combining with endothelin to initiate a change in cell activity [goid 4962] [evidence IMP]	Gpcr10; ET-AR; ETa	Gpcr10; ET-AR; ETa
Mus musculus	Riken	ILMN_207233	ILMN_207233	FKBP6	ri|G430069A15|PH00001D14|AK090036|1282					AK090036	Fkbp6		ILMN_1224270	006480576	S	1093	TCTCACGGCTCTCGCTCGCCACTGAGAACAGCATAGGACAGAATCCACTG						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The modification of peptidyl-proline [goid 18208] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IDA]; Interacting selectively with the immunosuppressant FK506 [goid 5528] [evidence IDA]		
Mus musculus	RefSeq	ILMN_194338	ILMN_256957	SIN3A	NM_011378.1	NM_011378.1		20466	7106406	NM_011378.1	Sin3a	NP_035508.1	ILMN_2612143	007330097	S	4833	CTGTTTTGTACCTGCTTCTTTACTAGTCTGCCCTAGTGCCATCCACCAGC	9	+	56975804-56975853	9qB	Mus musculus transcriptional regulator, SIN3A (yeast) (Sin3a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	KIAA4126; Sin3; mSin3A; AW553200; mKIAA4126	KIAA4126; Sin3; mSin3A; AW553200; mKIAA4126
Mus musculus	RefSeq	ILMN_213152	ILMN_213152	EAF1	NM_028932.3	NM_028932.3		74427	142362843	NM_028932.3	Eaf1	NP_083208.1	ILMN_1232473	007510386	S	363	GCGGCCCTATCAGAAAGACTGTGTGCTCATTATTAACCACGACACTGGAG	14	+	32313344-32313393	14qB	Mus musculus ELL associated factor 1 (Eaf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]	AI666536; 4933403C17Rik	AI666536; 4933403C17Rik
Mus musculus	RefSeq	ILMN_213152	ILMN_213152	EAF1	NM_028932.3	NM_028932.3		74427	142362843	NM_028932.3	Eaf1	NP_083208.1	ILMN_1223742	006020452	S	4021	TTAAACTGACATCTATGTGAAATAGAGTTAAGAATCCTTTATGTGGCTCT	14	+	32322891-32322940	14qB	Mus musculus ELL associated factor 1 (Eaf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]	AI666536; 4933403C17Rik	AI666536; 4933403C17Rik
Mus musculus	RefSeq	ILMN_209847	ILMN_209847	OLFR323	NM_146376.2	NM_146376.2		258373	147901463	NM_146376.2	Olfr323	NP_666488.2	ILMN_2599764	006370575	S	890	TCAAAGAAGCTGTGAGAAAAATCGTGAGAACCAAGTGTGGGGTCTACAGA				11qB1.3	Mus musculus olfactory receptor 323 (Olfr323), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR107-1; RP23-128D9.5	MOR107-1; RP23-128D9.5
Mus musculus	RefSeq	ILMN_210479	ILMN_317796	LOC100048721	XM_001481033.1	XM_001481033.1		100048721	149249754	XM_001481033.1	LOC100048721	XP_001481083.1	ILMN_2756578	001470128	S	201	GAATTTAGTGTGCTTCCTTCTCTTTCCATGAAGACTGCATGCACTGTGCC					PREDICTED: Mus musculus similar to fibronectin leucine rich transmembrane protein 3, transcript variant 1 (LOC100048721), mRNA.					
Mus musculus	RefSeq	ILMN_210479	ILMN_317796	LOC100048721	XM_001481033.1	XM_001481033.1		100048721	149249754	XM_001481033.1	LOC100048721	XP_001481083.1	ILMN_2750740	000650021	S	3259	CAATCAGGACTGCGTTCACATGAGACCCTTGTAGTATAAGCACAGGCCGT					PREDICTED: Mus musculus similar to fibronectin leucine rich transmembrane protein 3, transcript variant 1 (LOC100048721), mRNA.					
Mus musculus	RefSeq	ILMN_240786	ILMN_319777	LOC100045188	XM_001473819.1	XM_001473819.1		100045188	149251635	XM_001473819.1	LOC100045188	XP_001473869.1	ILMN_3163353	004780064	A	1142	AGCAGATTCGCCTGCTAGGGGGGTTTCAGAGTCTAGGTGGGCCTGGGGAA					PREDICTED: Mus musculus similar to ankyrin repeat domain 34 (LOC100045188), mRNA.					
Mus musculus	RefSeq	ILMN_207423	ILMN_244221	RBBP4	NM_009030.3	NM_009030.3		19646	118130570	NM_009030.3	Rbbp4	NP_033056.2	ILMN_1249638	007160392	S	2221	GTCTTCTCCCGAGAGCTACATAGGTTTCCAAGAATCTCAAAGGCAGTGTG	4	-	128986480-128986529	4qD2.2	Mus musculus retinoblastoma binding protein 4 (Rbbp4), mRNA.	An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mRbAp48	mRbAp48
Mus musculus	RefSeq	ILMN_217966	ILMN_244221	RBBP4	NM_009030.3	NM_009030.3		19646	118130570	NM_009030.3	Rbbp4	NP_033056.2	ILMN_2689917	004920240	S	3085	GCAGCCAATTTCTGCTATATGGATCCACAACTTTGTGCTACAGGTATTAG	4	-	128985616-128985665	4qD2.2	Mus musculus retinoblastoma binding protein 4 (Rbbp4), mRNA.	An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mRbAp48	mRbAp48
Mus musculus	RefSeq	ILMN_208824	ILMN_244221	RBBP4	NM_009030.3	NM_009030.3		19646	118130570	NM_009030.3	Rbbp4	NP_033056.2	ILMN_1230623	001190692	S	4212	GGGAACTTGAGTGCCTGAGAAGTGTGTATGTAGAACCTGGATTTAGGGTG	4	-	128984489-128984538	4qD2.2	Mus musculus retinoblastoma binding protein 4 (Rbbp4), mRNA.	An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mRbAp48	mRbAp48
Mus musculus	MEEBO	ILMN_211559	ILMN_211559	5730564L20RIK	scl0070651.1_285	XM_147675.1			20856719	XM_147675.1	5730564L20Rik		ILMN_2617103	002900563	S	2118	GGTGCAAGGCCTTGGGAGAGATTTCTCAAGCTGGCATTAAACTCTGGGTT										
Mus musculus	RefSeq	ILMN_248993	ILMN_248993	LOC436177	NM_001024708.1	NM_001024708.1		436177	85701537	NM_001024708.1	LOC436177	NP_001019879.1	ILMN_2860281	004210735	S	3691	TTCTTTTTGGCACGGGGTCTTGCACTAAGCCTGGAGCTCACTGATTGGGC	8	-	20406907-20406956		Mus musculus similar to Cadherin-11 precursor (Osteoblast-cadherin) (OB-cadherin) (OSF-4) (LOC436177), mRNA.					
Mus musculus	RefSeq	ILMN_211246	ILMN_222975	GIMAP4	NM_174990.3	NM_174990.3		107526	56549086	NM_174990.3	Gimap4	NP_778155.2	ILMN_1225854	005690519	S	1472	ATAGCATACAGTTCTCAATGGACATCAGGTTTGTTTAATTATATTTTCAC	6	+	48641723-48641772	6qB2.3	Mus musculus GTPase, IMAP family member 4 (Gimap4), transcript variant 1, mRNA.			Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	IMAP4; mIAN1; E430007K16Rik; Ian1; AU019574; MGC11734	IMAP4; mIAN1; E430007K16Rik; Ian1; AU019574; MGC11734
Mus musculus	RefSeq	ILMN_222975	ILMN_222975	GIMAP4	NM_174990.3	NM_174990.3		107526	56549086	NM_174990.3	Gimap4	NP_778155.2	ILMN_2757526	002750392	S	966	GAACACAAGTATGATACTTGAATTAATTATAAAAGCATGGGAGATTGCTT	6	+	48641217-48641266	6qB2.3	Mus musculus GTPase, IMAP family member 4 (Gimap4), transcript variant 1, mRNA.			Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	IMAP4; mIAN1; E430007K16Rik; Ian1; AU019574; MGC11734	IMAP4; mIAN1; E430007K16Rik; Ian1; AU019574; MGC11734
Mus musculus	MEEBO	ILMN_188260	ILMN_188260	DDX26	scl45445.19_47				51467748	NM_008715	Ddx26		ILMN_1217716	005310288	S	6023	CAAATCCCTCGCTTGTCATTGGCTCTTGCGTGTCAGTTTCCCTCAGGTTA										
Mus musculus	MEEBO	ILMN_188260	ILMN_188260	DDX26	scl45445.19_47				51467748	NM_008715	Ddx26		ILMN_2451146	003520286	S	20	ATGATGTTGACAGTATTTTCTTTTAACAGTCTGTGTTAAACTATGCTAAT										
Mus musculus	MEEBO	ILMN_184435	ILMN_184435	PDE1C	scl28968.23.1018_17				6755007	NM_011054	Pde1c		ILMN_2418607	002680463	S	17	TCAATAAACATTCACATGTGGAGAGTCTACATTGCTTATAAATGCCTACT							The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence ISO]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184435	ILMN_184435	PDE1C	scl28968.23.1018_17				6755007	NM_011054	Pde1c		ILMN_2632435	001690181	S	2819	TATTGGCCACTGCAAGCCTGTTCTCATTCCTGGGAGATTCAAGAAAAGGC							The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence ISO]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_257812	ILMN_257812	SLCO2A1	NM_033314.2	NM_033314.2		24059	110625830	NM_033314.2	Slco2a1	NP_201571.2	ILMN_2961216	007040100	S	3718	GCCTTCAGGGAGCCTTTGTTACTGGCAGTGTTCTTTCTGAAGCCACCGGG				9qF1	Mus musculus solute carrier organic anion transporter family, member 2a1 (Slco2a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of prostaglandins into, out of, within or between cells [goid 15732] [evidence IDA]	Catalysis of the transfer of prostaglandins from one side of the membrane to the other. A prostaglandin is any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 15132] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	2310021C19Rik; mPgt; Slc21a2; Pgt	2310021C19Rik; mPgt; Slc21a2; Pgt
Mus musculus	RefSeq	ILMN_257812	ILMN_257812	SLCO2A1	NM_033314.2	NM_033314.2		24059	110625830	NM_033314.2	Slco2a1	NP_201571.2	ILMN_2961221	004120167	S	3511	AAGATCCTGGTCTGACTGCCCATGCACACCCTGAGGCTCCAGCAGGTTGA				9qF1	Mus musculus solute carrier organic anion transporter family, member 2a1 (Slco2a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of prostaglandins into, out of, within or between cells [goid 15732] [evidence IDA]	Catalysis of the transfer of prostaglandins from one side of the membrane to the other. A prostaglandin is any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 15132] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	2310021C19Rik; mPgt; Slc21a2; Pgt	2310021C19Rik; mPgt; Slc21a2; Pgt
Mus musculus	RefSeq	ILMN_218352	ILMN_218352	BC003993	NM_030560.2	NM_030560.2		80744	27881424	NM_030560.2	BC003993	NP_085037.2	ILMN_2895293	004290537	S	2824	AGAGAGGCGCTGGGAAAAGCCTGGCAGACGCCCTGAACAGTCTAGAGAGT	2	-	77696897-77696946	2qC3	Mus musculus cDNA sequence BC003993 (BC003993), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC107219; B230213M24; MGC7531; mKIAA1604; AL022752; AI173004; AA684037; MGC107450	MGC107219; B230213M24; MGC7531; mKIAA1604; AL022752; AI173004; AA684037; MGC107450
Mus musculus	RefSeq	ILMN_185547	ILMN_185547	UGDH	NM_009466.2	NM_009466.2		22235	31981926	NM_009466.2	Ugdh	NP_033492.1	ILMN_1253090	001580152	S	2254	AAAAATATAACCTGAGAAGAAAAATCAACAGTATGGTCTATTTCATTTTG	5	-	65804599-65804648	5qC3.1	Mus musculus UDP-glucose dehydrogenase (Ugdh), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the reaction: UDP-glucose + 2 NAD+ + H2O = UDP-glucuronate + 2 NADH + H+ [goid 3979] [evidence IEA]	Udpgdh	Udpgdh
Mus musculus	RefSeq	ILMN_214126	ILMN_214126	OLFR372	NM_207555.1	NM_207555.1		404315	46430569	NM_207555.1	Olfr372	NP_997438.1	ILMN_2911964	002940440	S	637	CTCATCTTCATTTCCTACGGCCACGTTCTGGGAGCTGTACTGCACATGCG	8	+	74582217-74582266	8qB3.3	Mus musculus olfactory receptor 372 (Olfr372), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR282-1	MOR282-1
Mus musculus	RefSeq	ILMN_256835	ILMN_256835	RNF121	NM_029211.2	NM_029211.2		75212	70778931	NM_029211.2	Rnf121	NP_083487.2	ILMN_2903529	004280398	S	1314	CTCACCTCTGGCTGAGAGCACTGGTGGGTTTGCAGGAGGCTGGGTGCTTC	7	-	109168510-109168559	7qE3	Mus musculus ring finger protein 121 (Rnf121), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4930544L10Rik	4930544L10Rik
Mus musculus	RefSeq	ILMN_220851	ILMN_258616	4930523C11RIK	NM_001009545.1	NM_001009545.1		238405	57222275	NM_001009545.1	4930523C11Rik	NP_001009545.1	ILMN_1237945	006940754	S	928	GGGCCACAAGATAACCAGGTTAATCCAGCTGAGAGGAGTATATGTTCTTC	12|NT_114985.2	-	114729069-114729118	12qF1	Mus musculus RIKEN cDNA 4930523C11 gene (4930523C11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			ADAM6b	ADAM6b
Mus musculus	MEEBO	ILMN_213709	ILMN_213709	CCL20	scl17735.3_77				8394247	NM_016960	Ccl20		ILMN_1218692	002320451	S	583	CCCACAATCCATGGGGGCGCTTAGTGGAAGGATTAATATTATGTTTAAGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221768	ILMN_221768	OLFR211	NM_146912.1	NM_146912.1		258914	22129064	NM_146912.1	Olfr211	NP_667123.1	ILMN_2740062	003440491	S	804	GAAGAGCAAATTGGCTGGTGTGCTGTATACCATGTTGAGCCCTACGCTCA	6	+	116444432-116444481	6qE3	Mus musculus olfactory receptor 211 (Olfr211), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR253-9	MOR253-9
Mus musculus	RefSeq	ILMN_223249	ILMN_257847	MAP6D1	NM_198599.2	NM_198599.2		208158	139948799	NM_198599.2	Map6d1	NP_941001.2	ILMN_2761405	004060468	S	970	TTATTATTTATTTATTTTTGATGATGTATGATAGTATCCAGGCTGTATCC	16	-	20235636-20235685	16qA3	Mus musculus MAP6 domain containing 1 (Map6d1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IDA]; The palmitoylation of the N-terminal cysteine of proteins to form the derivative N-palmitoyl-cysteine [goid 18009] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	A330066I15Rik	A330066I15Rik
Mus musculus	Riken	ILMN_206553	ILMN_206553	D630036F01RIK	ri|D630036F01|PX00197P13|AK085510|1166					AK085510	D630036F01Rik		ILMN_1243477	003390070	S	1102	GTTTATCTCCTTGAACACAGGATCCAGCTCCATTTCACTCCTGTTGCCCC										
Mus musculus	RefSeq	ILMN_194525	ILMN_238539	GAS2L3	NM_001079876.1	NM_001079876.1		237436	120407061	NM_001079876.1	Gas2l3	NP_001073345.1	ILMN_1234549	004610270	S	2207	GCTAAAGGGCCTCCCAAAAGCAGCAAGCCACCAACTTCCTTCAGGGACCC	10	-	88876059-88876108	10qC2	Mus musculus growth arrest-specific 2 like 3 (Gas2l3), transcript variant 2, mRNA.		The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		8430435B07Rik; Gm240	8430435B07Rik; Gm240
Mus musculus	RefSeq	ILMN_194525	ILMN_238539	GAS2L3	NM_001079876.1	NM_001079876.1		237436	120407061	NM_001079876.1	Gas2l3	NP_001073345.1	ILMN_2507232	007160133	S	6584	CCTTTTCCCATAGTCCTGTTTCAGGGTCACACTTTGATACACCGTAAATG	10	-	88871682-88871731	10qC2	Mus musculus growth arrest-specific 2 like 3 (Gas2l3), transcript variant 2, mRNA.		The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		8430435B07Rik; Gm240	8430435B07Rik; Gm240
Mus musculus	RefSeq	ILMN_216656	ILMN_216656	B830045N13RIK	NM_153539.2	NM_153539.2		215378	71896638	NM_153539.2	B830045N13Rik	NP_705767.2	ILMN_2831407	000940520	S	2564	CGTGTAAATAAACTCTCCCCACCCGGTCAGCGCCGCCTGGATCTGTTTTC	1	+	148749072-148749121	1qF-qG1	Mus musculus RIKEN cDNA B830045N13 gene (B830045N13Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC107461; MGC40674	MGC107461; MGC40674
Mus musculus	RefSeq	ILMN_209992	ILMN_209992	KDELC1	NM_023645.3	NM_023645.3		72050	141801753	NM_023645.3	Kdelc1	NP_076134.1	ILMN_2601147	002360131	S	1681	CGAGCCCCAAATTCGAGAGGGTATGAAGAGGGTAGAGCCACAATCCGAGG	1	-	44164644-44164693	1qC1.1	Mus musculus KDEL (Lys-Asp-Glu-Leu) containing 1 (Kdelc1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			5730416C13Rik; 1810049A15Rik; EP58; Kdel1	5730416C13Rik; 1810049A15Rik; EP58; Kdel1
Mus musculus	RefSeq	ILMN_198558	ILMN_312722	LOC665672	XR_033256.1	XR_033256.1		665672	149271306	XR_033256.1	LOC665672		ILMN_1219716	001010192	S	198	CCCCACAGAAGCAGAGCTGCAGGACATGATCAATGAAGTAGATGCAGCTA				XqA4	PREDICTED: Mus musculus similar to ENSANGP00000012700 (LOC665672), misc RNA.					
Mus musculus	RefSeq	ILMN_189187	ILMN_189187	TTYH2	NM_053273.2	NM_053273.2		117160	68989250	NM_053273.2	Ttyh2	NP_444503.2	ILMN_2491860	007400301	S	3372	GGTTCTACAAGAGTCGGGTGGGCAAACCTCTTCTTGATCCATGTTCGCCC	11	+	114582214-114582263	11qE2	Mus musculus tweety homolog 2 (Drosophila) (Ttyh2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	1110001A03Rik	1110001A03Rik
Mus musculus	MEEBO	ILMN_211176	ILMN_211176	BRD8	scl0002168.1_7	NM_144864.1			21536259	NM_144864.1	Brd8		ILMN_2641624	005360187	S	2109	TAGTCTTAAGTCCTAGCGTGGCTGTAGCCTCTTGTTCATTCGTGTGCTGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]			
Mus musculus	Riken	ILMN_203321	ILMN_203321	E430003D02RIK	ri|E430003D02|PX00096C07|AK088068|2838					AK088068	E430003D02Rik		ILMN_1224932	007570056	S	2430	GCTTCTGTGGGGCGGAGTCTTAAGACACAGTTTCCCCTGTTCCAGCACAG										
Mus musculus	RefSeq	ILMN_222879	ILMN_247152	EG210155	NM_177593.1	NM_177593.1		210155	46559427	NM_177593.1	EG210155	NP_808261.1	ILMN_1246202	007050189	S	516	GTGGAAGTTTCTAATCCAGGCTCCAGCAAGTCACCCTCACGTGTAGTCGC	7	-	25507829-25507878	7qA3	Mus musculus predicted gene, EG210155 (EG210155), mRNA.				MGC48079	MGC48079
Mus musculus	RefSeq	ILMN_210360	ILMN_210360	OOG3	NM_201258.1	NM_201258.1		100012	41054937	NM_201258.1	Oog3	NP_957710.1	ILMN_2604834	003120274	S	1637	CAATCATGTAAAGGTCTGAGATAAACAATAAAAATGCAAGATATTCCTCT	4	-	143747611-143747660	4qE1	Mus musculus oogenesin 3 (Oog3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA617276; C86881	AA617276; C86881
Mus musculus	RefSeq	ILMN_219632	ILMN_219632	NLRP4A	NM_172896.1	NM_172896.1		243880	27370371	NM_172896.1	Nlrp4a	NP_766484.1	ILMN_2785420	004850035	S	3227	TCCATGCTTGCGCATCCTAAGCAGTCTGTAAGCAGAAGCAGAGAACAAGG	7	+	26183870-26183899:26183900-26183919	7qA3	Mus musculus NLR family, pyrin domain containing 4A (Nlrp4a), mRNA.		Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence RCA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NALP4; E330028A19Rik; E330021B02; Nalp4a; Nalp-ita; Nalp-eta	NALP4; E330028A19Rik; E330021B02; Nalp4a; Nalp-ita; Nalp-eta
Mus musculus	Riken	ILMN_207440	ILMN_207440	9530051E16RIK	ri|9530051E16|PX00653F14|AK079246|2477					AK079246	9530051E16Rik		ILMN_2587614	000150707	S	1	GCATCTTGTGTTGTTGAGGCTGAGGATTGACTTGGGTTCTGAGAGACTCC										
Mus musculus	Riken	ILMN_204882	ILMN_204882	A530023B05RIK	ri|A530023B05|PX00140C16|AK040752|1122					AK040752	A530023B05Rik		ILMN_2568340	007550142	S	147	GAGCCGGGAACTCTTGCTTGGTTAGTGTTTGCTTTCCGCCTCTGGGAGGA										
Mus musculus	MEEBO	ILMN_184811	ILMN_184811	SCL0001045.1_6	scl0001045.1_6	AK037114.1			26085616	AK037114.1	scl0001045.1_6		ILMN_2421769	002370537	S	14	CCAAAAAGGAAAAACGACCACACAGGAGGTGGCGGTCCAGAGCTATTGGC										
Mus musculus	RefSeq	ILMN_218598	ILMN_218598	KLHL25	NM_182782.1	NM_182782.1		207952	33354237	NM_182782.1	Klhl25	NP_877583.1	ILMN_1217241	003780372	S	2161	CCAGCAGCCATTCTGACGAAGTGAGGTCTAATGAAGTGACGTGGCTGTTC	7	+	83012295-83012344	7qD2	Mus musculus kelch-like 25 (Drosophila) (Klhl25), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC36331; 2810402K13Rik; BC027373	MGC36331; 2810402K13Rik; BC027373
Mus musculus	RefSeq	ILMN_199935	ILMN_226066	C030017K20RIK	XM_989220.1	XM_989220.1		381581	94372810	XM_989220.1	C030017K20Rik	XP_994314.1	ILMN_1232992	002680102	S	2441	AGCTGGACACAGACACAACAACCTCCCCTGCCACCCGAGAGCTACAAGTG	4	+	154309556-154309605		PREDICTED: Mus musculus RIKEN cDNA C030017K20 gene (C030017K20Rik), mRNA.					
Mus musculus	MEEBO	ILMN_215169	ILMN_215169	PTRF	scl019285.1_0	NM_008986.1			6679566	NM_008986.1	Ptrf		ILMN_1243992	002320014	S	997	AAGCTGCGCAAGTCCTTCACGCCCGACCATGTGGTGTATGCGCGCTCCAA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA];  [goid 6361] [evidence IDA]	Any activity that brings about termination of transcription by RNA polymerase I [goid 3716] [evidence IDA]; Interacting selectively with an unprocessed ribosomal RNA transcript [goid 42134] [evidence IDA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210499	ILMN_210499	ACTR10	NM_019785.1	NM_019785.1		56444	9789886	NM_019785.1	Actr10	NP_062759.1	ILMN_1233481	002940326	S	1245	CCCCTGGAAATGATGTTTGATGTGGGGAAAGCGCAACCACCGCTGATGAA	12	+	72062978-72063027	12qC3	Mus musculus ARP10 actin-related protein 10 homolog (S. cerevisiae) (Actr10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Arp11; Actr11	Arp11; Actr11
Mus musculus	RefSeq	ILMN_210499	ILMN_210499	ACTR10	NM_019785.1	NM_019785.1		56444	9789886	NM_019785.1	Actr10	NP_062759.1	ILMN_2703354	002490403	S	163	CTGGTCCACGATGTATAATTCCTAGTGTGATAAAAAGAGCTGGCATGTCT	12	+	72041822-72041857:72043246-72043259	12qC3	Mus musculus ARP10 actin-related protein 10 homolog (S. cerevisiae) (Actr10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Arp11; Actr11	Arp11; Actr11
Mus musculus	RefSeq	ILMN_211505	ILMN_211505	1700067P10RIK	NM_026625.2	NM_026625.2		68224	126722639	NM_026625.2	1700067P10Rik	NP_080901.2	ILMN_2616500	003420068	S	539	GGGGTTCACATCCCTAGGGCAGTATCTCCGGTGACATCACTGGTGGAAGA	17	+	48227615-48227664	17qC	Mus musculus RIKEN cDNA 1700067P10 gene (1700067P10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188033	ILMN_250999	GNAL1	NM_008136.2	NM_008136.2		14670	122937360	NM_008136.2	Gnal1	NP_032162.2	ILMN_1230243	000290600	S	2525	TATGGTGCCGGAGCCAGGACTGCTCGTGACCCAGACCTCATGGAGCACAG	17	+	36126188-36126237	17qB1	Mus musculus guanine nucleotide binding protein-like 1 (Gnal1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_250999	ILMN_250999	GNAL1	NM_008136.2	NM_008136.2		14670	122937360	NM_008136.2	Gnal1	NP_032162.2	ILMN_2932824	002450706	S	2394	TTTACGAGCGCTTTGTGGGTGAAGGAGCCGTGGAGGTGTGTCACCACGGA	17	+	36126057-36126106	17qB1	Mus musculus guanine nucleotide binding protein-like 1 (Gnal1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220614	ILMN_220614	1810037C20RIK	NM_025473.2	NM_025473.2		66294	48976070	NM_025473.2	1810037C20Rik	NP_079749.1	ILMN_2724415	003890544	S	1739	CTTCTGCAAGCCTGAATGGAGCAATCTGGCCTTAAGTGCCCAAGTAGCTG	X	-	71632919-71632924:71632967-71633010	XqA7.3	Mus musculus RIKEN cDNA 1810037C20 gene (1810037C20Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			RP23-436K3.15; MGC30343; Fam3A	RP23-436K3.15; MGC30343; Fam3A
Mus musculus	RefSeq	ILMN_209268	ILMN_209268	1700020N01RIK	NM_183266.1	NM_183266.1		67692	34304051	NM_183266.1	1700020N01Rik	NP_899089.1	ILMN_2795968	005270059	S	152	GAACCAAGGCGAGAGCTGTGTGAGCCTGGAGGACGTGTGCCTGCGTTTCA	10	+	21282822-21282871	10qA3	Mus musculus RIKEN cDNA 1700020N01 gene (1700020N01Rik), mRNA.				MGC118229	MGC118229
Mus musculus	RefSeq	ILMN_201154	ILMN_201154	LOC384867	XM_357907.1	XM_357907.1			38089501	XM_357907.1	LOC384867		ILMN_1256275	002370682	S	492	CCCGCAGGTGACCATCCTTACCAGTTTTCCTCCAGCCTATCAAGCAAGGG										
Mus musculus	RefSeq	ILMN_200025	ILMN_200025	LOC383123	XM_356888.1	XM_356888.1			38079900	XM_356888.1	LOC383123		ILMN_1242729	006380189	S	696	GGAGCAGACTTCAGATGGAAATGGTAGATCCAGAAGCGGAGACATTGCCC										
Mus musculus	RefSeq	ILMN_251066	ILMN_251066	TAAR7D	NM_001010838.1	NM_001010838.1		435206	58082072	NM_001010838.1	Taar7d	NP_001010838.1	ILMN_2991722	006840010	S	438	CATTGCAGTCAGTGATCCTCTGACCTACCCCACCAGGTTTACTGCATCTG	10	+	23747465-23747514	10qA4	Mus musculus trace amine-associated receptor 7D (Taar7d), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]		
Mus musculus	RefSeq	ILMN_209711	ILMN_209711	RABIF	NM_145510.1	NM_145510.1		98710	21704003	NM_145510.1	Rabif	NP_663485.1	ILMN_2672997	004390612	S	570	AGAGCATGCCTCCCACTTAGTCGTCTCTGTCGCACCTTGTCCTAAAGCCC	1	+	136403072-136403121	1qE4	Mus musculus RAB interacting factor (Rabif), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI842864; RASGFR3; E130318E12Rik; MSS4; AW549708	AI842864; RASGFR3; E130318E12Rik; MSS4; AW549708
Mus musculus	RefSeq	ILMN_209711	ILMN_209711	RABIF	NM_145510.1	NM_145510.1		98710	21704003	NM_145510.1	Rabif	NP_663485.1	ILMN_2598451	003420128	S	1487	GCTCTGTCATTTCTCATCTGGAGTGACCTGGTAGCTTAAAAGGACTCTGT	1	+	136403989-136404038	1qE4	Mus musculus RAB interacting factor (Rabif), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI842864; RASGFR3; E130318E12Rik; MSS4; AW549708	AI842864; RASGFR3; E130318E12Rik; MSS4; AW549708
Mus musculus	Riken	ILMN_206383	ILMN_206383	B230217C12RIK	ri|B230217C12|PX00070E23|AK080808|1609					AK080808	B230217C12Rik		ILMN_1256158	005560634	S	1547	TCCTTCCTGGACTATAAAGTGAATTTGAGAACATCCAGGGCTACTCAGAG										
Mus musculus	RefSeq	ILMN_217953	ILMN_217953	EBAG9	NM_019480.4	NM_019480.4		55960	111186465	NM_019480.4	Ebag9	NP_062353.3	ILMN_1250359	005080075	S	1289	AATAATTTTATGGTGGGAAACTACTCTGCTATCTATTATGCTTTTGTTCA	15	+	44472298-44472347	15qB3.2	Mus musculus estrogen receptor-binding fragment-associated gene 9 (Ebag9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		MGC118417; Rcas1	MGC118417; Rcas1
Mus musculus	RefSeq	ILMN_217953	ILMN_217953	EBAG9	NM_019480.4	NM_019480.4		55960	111186465	NM_019480.4	Ebag9	NP_062353.3	ILMN_1224670	006370341	S	200	GCCACCGGGCGTGGGATTGCGTAACCAGAAAGCTCGCGTGTGTGTTGTTT	15	+	44451386-44451435	15qB3.2	Mus musculus estrogen receptor-binding fragment-associated gene 9 (Ebag9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		MGC118417; Rcas1	MGC118417; Rcas1
Mus musculus	RefSeq	ILMN_187939	ILMN_187939	GLRX3	NM_023140.4	NM_023140.4		30926	142348626	NM_023140.4	Glrx3	NP_075629.2	ILMN_2500997	001050600	S	1086	CCTTGGAACAGTTGATGATTTGGTCCTGAGAAGTGGACTAACAGTAGAGA	7	+	144659712-144659761	7qF4	Mus musculus glutaredoxin 3 (Glrx3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	PICOT	PICOT
Mus musculus	RefSeq	ILMN_187939	ILMN_187939	GLRX3	NM_023140.4	NM_023140.4		30926	142348626	NM_023140.4	Glrx3	NP_075629.2	ILMN_1256672	003390603	S	1497	GCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGG	7	+	144660123-144660172	7qF4	Mus musculus glutaredoxin 3 (Glrx3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	PICOT	PICOT
Mus musculus	RefSeq	ILMN_187939	ILMN_187939	GLRX3	NM_023140.4	NM_023140.4		30926	142348626	NM_023140.4	Glrx3	NP_075629.2	ILMN_1212850	006480209	S	1504	GTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCAC	7	+	144660130-144660179	7qF4	Mus musculus glutaredoxin 3 (Glrx3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	PICOT	PICOT
Mus musculus	RefSeq	ILMN_198518	ILMN_320146	LOC333184	XR_032640.1	XR_032640.1		333184	149256787	XR_032640.1	LOC333184		ILMN_1228207	006840400	S	487	GGCCACAGGCAACCAAGGGAGTGACAAATGCAACCAAGGTCTCTGCTGGC				7qA1	PREDICTED: Mus musculus similar to Mitochondrial methionyl-tRNA formyltransferase (LOC333184), misc RNA.					
Mus musculus	Riken	ILMN_203870	ILMN_203870	A630032M05RIK	ri|A630032M05|PX00144N21|AK041730|1362					AK041730	A630032M05Rik		ILMN_2560594	006840452	S	487	CCAATGCTTGGGAGGCAGAGGCTGGTAGATCTTTGTAAGTTCAAGGCTAG										
Mus musculus	Riken	ILMN_202397	ILMN_202397	4930547N16RIK	ri|4930547N16|PX00035I17|AK016062|917					AK016062	4930547N16Rik		ILMN_1222197	005900475	S	243	GCTCTTCCAAATATGTGCTCTTGGTGCTGTTACCAGATTTGCCCTCTGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_230215	ILMN_230215	OLFR1390	NM_147065.1	NM_147065.1		259068	49227394	NM_147065.1	Olfr1390	NP_667276.1	ILMN_2863514	005910465	S	887	TCAAGGGGGCTCTGTGGAAGGTGCTAGGGAGAGCTACTGACTTGGGATAG	11	+	49154922-49154971	11qB1.2	Mus musculus olfactory receptor 1390 (Olfr1390), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-2; RP23-10M12.9	MOR256-2; RP23-10M12.9
Mus musculus	RefSeq	ILMN_215407	ILMN_224325	ANKIB1	NM_001003909.2	NM_001003909.2		70797	61656164	NM_001003909.2	Ankib1	NP_001003909.2	ILMN_2693286	000730201	S	6139	CCTAATATTTTTACAGTAACCCACTTGCTGAAAATTGTATACCCAAGAGG	5	-	3690237-3690286	5qA1	Mus musculus ankyrin repeat and IBR domain containing 1 (Ankib1), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	4631416I11Rik; mKIAA1386; MGC90780; C80642; AW494740; 2310061P20Rik	4631416I11Rik; mKIAA1386; MGC90780; C80642; AW494740; 2310061P20Rik
Mus musculus	RefSeq	ILMN_210476	ILMN_210476	MBL1	NM_010775.2	NM_010775.2		17194	118130139	NM_010775.2	Mbl1	NP_034905.1	ILMN_1238266	004120762	S	788	ATGACATTTCCTGTCAAGCTTCCTTCAAGGCTGTCTGCGAGTTCCCAGCC	14	+	41972113-41972162	14qB	Mus musculus mannose-binding lectin (protein A) 1 (Mbl1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MBP-A; MBL-A; S-MBP	MBP-A; MBL-A; S-MBP
Mus musculus	RefSeq	ILMN_218272	ILMN_218272	OCRL	NM_177215.3	NM_177215.3		320634	46195806	NM_177215.3	Ocrl	NP_796189.2	ILMN_1244077	003870411	S	4831	CAGATCCGATGGAAGAAACCTACTTCCCTATCCTGCCTATCCTGCCCCTC	X	+	45318692-45318741	XqA4	Mus musculus oculocerebrorenal syndrome of Lowe (Ocrl), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]		Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IDA]	9530014D17Rik; OCRL1; BB143339	9530014D17Rik; OCRL1; BB143339
Mus musculus	RefSeq	ILMN_236556	ILMN_236556	5830415F09RIK	NM_029086.1	NM_029086.1		74753	110626024	NM_029086.1	5830415F09Rik	NP_083362.1	ILMN_2924591	007330661	S	1325	GAACAATCATCAGTGGAAGAGGAGGTGCAGCAGAGAGCCGGACCCAGCAG				4qB1	Mus musculus RIKEN cDNA 5830415F09 gene (5830415F09Rik), mRNA. XM_976769			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	AV014846	AV014846
Mus musculus	MEEBO	ILMN_196149	ILMN_196149	C030021G16RIK	scl0077530.1_171						C030021G16Rik		ILMN_2522055	000070164	S	9	CCAGCCAACAGTCACCATTTTGAAATAAATAATACAGGGTACTGAACATC										
Mus musculus	RefSeq	ILMN_254277	ILMN_254277	RFESD	NM_178916.3	NM_178916.3		218341	82775348	NM_178916.3	Rfesd	NP_849247.2	ILMN_2920676	001440196	S	2607	GGGGGCTGGGAAGTTATAGATAGGAAGACCCAGGAAAACGTAGCTTGGTC	13	-	76467687-76467736	13qC1	Mus musculus Rieske (Fe-S) domain containing (Rfesd), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AI256775; D030068K09	AI256775; D030068K09
Mus musculus	RefSeq	ILMN_218861	ILMN_218861	GARNL1	NM_019994.4	NM_019994.4		56784	51230428	NM_019994.4	Garnl1	NP_064378.4	ILMN_1233651	002600288	S	7753	GCATGATTGATACCAACTGCATGTGTAAATATATCATCCTGACAAACCAC	12	-	56703987-56704036	12qC1	Mus musculus GTPase activating RANGAP domain-like 1 (Garnl1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the rate of GTP hydrolysis by a GTPase of the Ran family [goid 5098] [evidence ISA]	2310003F20Rik; Tulip1; GRIPE; AI563624; 4930400K19Rik; mKIAA0884	2310003F20Rik; Tulip1; GRIPE; AI563624; 4930400K19Rik; mKIAA0884
Mus musculus	Riken	ILMN_205781	ILMN_205781	D230018C02RIK	ri|D230018C02|PX00188A22|AK051910|2331					AK051910	D230018C02Rik		ILMN_1222804	000540053	S	2217	CTCTGCTCAAGGGAAAGTGTGCTAGGGCTAGGGAAATCTGGGGGCAGTGC										
Mus musculus	RefSeq	ILMN_198231	ILMN_198231	LOC195356	XM_111682.2	XM_111682.2			38083031	XM_111682.2	LOC195356		ILMN_1258634	004050201	S	1539	GCCCAGCTTCAGGAAGAGGATGGTATGGGAAATCCTACACAGTCACTTAC										
Mus musculus	Riken	ILMN_205341	ILMN_205341	A630040J04RIK	ri|A630040J04|PX00146K05|AK041827|1995					AK041827	A630040J04Rik		ILMN_1252015	001260278	S	1915	GAGCGTGGTGGCACAGAACATAGCAGCTGGGACCATGTGTTGGAAGAGGC										
Mus musculus	MEEBO	ILMN_187491	ILMN_187491	HERC1	scl0078507.1_160				51764931	XM_358383	Herc1		ILMN_2444603	002030100	S	2	GCAGGGTTGAGTGATAGCAACAGAACCCACATGCCTCCAAAGCTCTAAGA							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191528	ILMN_191528	C330014O21RIK	scl8016.1.1_328				51763220	XM_486035	C330014O21Rik		ILMN_2488580	002570377	S	19	AGACTTGGGGAGTTGATGAAATAGGTGGTCACGAGCTGGACCAGAGTGTG										
Mus musculus	MEEBO	ILMN_191528	ILMN_191528	C330014O21RIK	scl8016.1.1_328				51763220	XM_486035	C330014O21Rik		ILMN_1255410	006770280	S	11	ATGCATGGAGACTTGGGGAGTTGATGAAATAGGTGGTCACGAGCTGGACC										
Mus musculus	MEEBO	ILMN_191528	ILMN_191528	C330014O21RIK	scl8016.1.1_328				51763220	XM_486035	C330014O21Rik		ILMN_2497010	004060088	S	13	CTTTCCTGAAGTGCTGTCCAAAGGATTAGAGACAAGTCAGGCAAGAGCTC										
Mus musculus	Riken	ILMN_205387	ILMN_205387	D930046M07RIK	ri|D930046M07|PX00203C19|AK053082|3964					AK053082	D930046M07Rik		ILMN_1220138	006130475	S	3635	GACAGAGAGGGAAGGTGTTAGGACAGTCAAGACCACCGTGAAGGTCCTCC										
Mus musculus	RefSeq	ILMN_187484	ILMN_261172	LSS	NM_146006.1	NM_146006.1		16987	22122468	NM_146006.1	Lss	NP_666118.1	ILMN_2614161	005890553	S	2846	AAGTCATTTGAATGATCACCGACTCCCTTACTAAACAGACCCTGGGCGTA	10	+	76005301-76005308:76005213-76005240:76006596-76006609	10qC1	Mus musculus lanosterol synthase (Lss), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: (S)-2,3-epoxysqualene = lanosterol. This is a cyclization reaction that forms the sterol nucleus [goid 250] [evidence IEA]	2810025N20Rik; BC029082; MGC27893; D10Ertd116e	2810025N20Rik; BC029082; MGC27893; D10Ertd116e
Mus musculus	RefSeq	ILMN_197871	ILMN_197871	LOC236228	XM_135566.2	XM_135566.2			38079028	XM_135566.2	LOC236228		ILMN_2529654	007040332	S	1678	GCTGAGCCATATGACACTAGCCAAGGGAAAGGCACTTCTAGGGGGACATA										
Mus musculus	MEEBO	ILMN_218957	ILMN_218957	B230363K08RIK	scl16607.10.1_4	NM_172848.2			31559878	NM_172848.2	B230363K08Rik		ILMN_2702386	000670546	S	3813	TCATGTTTTGTTGTTGGGAAGGTATCACTTTAGAACAGTGGCTTGCACTT										
Mus musculus	RefSeq	ILMN_209301	ILMN_209301	PAPSS1	NM_011863.1	NM_011863.1		23971	6754981	NM_011863.1	Papss1	NP_035993.1	ILMN_2594477	000520243	S	1945	GAGTAACAGAGGGGACCACGCAGCCACCGACAGCCCTTCTCTGCGGTTGT	3	+	131306103-131306152	3qG3	Mus musculus 3'-phosphoadenosine 5'-phosphosulfate synthase 1 (Papss1), mRNA.	An enzyme complex that catalyzes the formation adenylylsulfate from sulfate and ATP [goid 9336] [evidence IC ]	The chemical reactions and pathways resulting in the formation of 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems [goid 50428] [evidence IDA]; The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds [goid 103] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: ATP + adenylylsulfate = ADP + 3'-phosphoadenosine 5'-phosphosulfate [goid 4020] [evidence IDA]; Catalysis of the reaction: ATP + SO4(2-) (sulfate) = diphosphate + adenylylsulfate [goid 4781] [evidence IDA]	SK1; AI325286; Asapk	SK1; AI325286; Asapk
Mus musculus	RefSeq	ILMN_209301	ILMN_209301	PAPSS1	NM_011863.1	NM_011863.1		23971	6754981	NM_011863.1	Papss1	NP_035993.1	ILMN_2859978	002650678	S	2019	CAGGCCGTTTCCCTCCGCGTGCATTGGTTTTGGTCTGTCTTTCAGTTCTG	3	+	131306177-131306226	3qG3	Mus musculus 3'-phosphoadenosine 5'-phosphosulfate synthase 1 (Papss1), mRNA.	An enzyme complex that catalyzes the formation adenylylsulfate from sulfate and ATP [goid 9336] [evidence IC ]	The chemical reactions and pathways resulting in the formation of 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems [goid 50428] [evidence IDA]; The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds [goid 103] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: ATP + adenylylsulfate = ADP + 3'-phosphoadenosine 5'-phosphosulfate [goid 4020] [evidence IDA]; Catalysis of the reaction: ATP + SO4(2-) (sulfate) = diphosphate + adenylylsulfate [goid 4781] [evidence IDA]	SK1; AI325286; Asapk	SK1; AI325286; Asapk
Mus musculus	RefSeq	ILMN_221845	ILMN_221845	PAICS	NM_025939.2	NM_025939.2		67054	31981122	NM_025939.2	Paics	NP_080215.1	ILMN_1234068	003310019	S	1969	CGTGGAGGGAATCTTTCTAGCTAGTAAAATTGGCATGACACTACTAAATT	5	+	77396121-77396170	5qC3.3	Mus musculus phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase (Paics), mRNA.	A protein complex that possesses phosphoribosylaminoimidazole carboxylase activity [goid 9320] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate [goid 6189] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate = 5-amino-1-(5-phospho-D-ribosyl)imidazole + CO2 [goid 4638] [evidence IEA]; Catalysis of the reaction: ATP + 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + L-aspartate = ADP + phosphate + (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate [goid 4639] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	PAIS; AIRC; 2610511I09Rik; ADE2H1	PAIS; AIRC; 2610511I09Rik; ADE2H1
Mus musculus	RefSeq	ILMN_216480	ILMN_216480	HCN1	NM_010408.1	NM_010408.1		15165	6754167	NM_010408.1	Hcn1	NP_034538.1	ILMN_2671559	003990259	S	2960	TATAACATTCAGTGTTACATGTCTTCCTCTCTTTAAAACCATTAAAGGAT	13	+	118765264-118765313	13qD2.3	Mus musculus hyperpolarization-activated, cyclic nucleotide-gated K+ 1 (Hcn1), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IMP]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HAC2; Bcng1	HAC2; Bcng1
Mus musculus	RefSeq	ILMN_214239	ILMN_214239	NEUROG2	NM_009718.2	NM_009718.2		11924	34328159	NM_009718.2	Neurog2	NP_033848.1	ILMN_2924180	006200647	S	1920	CAGGAGGGAGGATTGCTTCATGCATTATTTATCTCGACCTTTTAGGGGAG	3	+	127338252-127338301	3qG2	Mus musculus neurogenin 2 (Neurog2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	ngn-2; ngn2; Math4A; Atoh4	ngn-2; ngn2; Math4A; Atoh4
Mus musculus	RefSeq	ILMN_214239	ILMN_214239	NEUROG2	NM_009718.2	NM_009718.2		11924	34328159	NM_009718.2	Neurog2	NP_033848.1	ILMN_1213024	005290056	S	1451	CGTGTGAATCTCTCAGAGGGAATGCAACTGGTCCCTGTGATCTTTTCACC	3	+	127337783-127337832	3qG2	Mus musculus neurogenin 2 (Neurog2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	ngn-2; ngn2; Math4A; Atoh4	ngn-2; ngn2; Math4A; Atoh4
Mus musculus	MEEBO	ILMN_213182	ILMN_213182	1700015E13RIK	scl17244.2.1_12	XM_355274.1			38074092	XM_355274.1	1700015E13Rik		ILMN_2634503	003940408	S	557	GCCACATCAAGGGGGGTTTCAAGGAGGGTTTCAGCTGCAAGGTGTACTAC										
Mus musculus	RefSeq	ILMN_192635	ILMN_225559	CD226	NM_001039149.1	NM_001039149.1		225825	85540458	NM_001039149.1	Cd226	NP_001034238.1	ILMN_2489926	004390270	S	1334	CAAAGTTCATTATTCACTTATTAGCAAGAAGGTAGCATTATCATAAAGGA	18	+	89438905-89438954	18qE4	Mus musculus CD226 antigen (Cd226), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TLiSA1; Pta1; BC051526; DNAM1; DNAM-1	TLiSA1; Pta1; BC051526; DNAM1; DNAM-1
Mus musculus	RefSeq	ILMN_192635	ILMN_225559	CD226	NM_001039149.1	NM_001039149.1		225825	85540458	NM_001039149.1	Cd226	NP_001034238.1	ILMN_1239753	006650411	S	336	GGACAAGATGTCACACTCACTTGCCAGCTTCCAAGGACTTGGCCAGTGCA	18	+	89416427-89416476	18qE4	Mus musculus CD226 antigen (Cd226), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TLiSA1; Pta1; BC051526; DNAM1; DNAM-1	TLiSA1; Pta1; BC051526; DNAM1; DNAM-1
Mus musculus	RefSeq	ILMN_194926	ILMN_211945	PTPN14	NM_008976.2	NM_008976.2		19250	110825985	NM_008976.2	Ptpn14	NP_033002.2	ILMN_2510920	003460619	S	9079	AAGGCTTCTCACAACCAGGCCTCCCTCCTGTCCTAAGGGACAACACTGTC	1	+	191698907-191698956	1qH6	Mus musculus protein tyrosine phosphatase, non-receptor type 14 (Ptpn14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	PTP36; C130080N23Rik	PTP36; C130080N23Rik
Mus musculus	RefSeq	ILMN_206868	ILMN_211945	PTPN14	NM_008976.2	NM_008976.2		19250	110825985	NM_008976.2	Ptpn14	NP_033002.2	ILMN_2583288	002710154	S	313	CAGCTCCTGGAAGCCAGTGGTGGGGACCCAGACTCCCTGATGGTCAACGT	1	+	191552459-191552508	1qH6	Mus musculus protein tyrosine phosphatase, non-receptor type 14 (Ptpn14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	PTP36; C130080N23Rik	PTP36; C130080N23Rik
Mus musculus	RefSeq	ILMN_211945	ILMN_211945	PTPN14	NM_008976.2	NM_008976.2		19250	110825985	NM_008976.2	Ptpn14	NP_033002.2	ILMN_2621021	000460167	S	4033	TCCAGACCATTGCGCAGTACAAGTTCGTCTACCAAGTCCTCGTCCAGTTC	1	+	191693861-191693910	1qH6	Mus musculus protein tyrosine phosphatase, non-receptor type 14 (Ptpn14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	PTP36; C130080N23Rik	PTP36; C130080N23Rik
Mus musculus	MEEBO	ILMN_189491	ILMN_189491	DNM1L	scl48723.22_456				22779911	NM_152816	Dnm1l		ILMN_2660267	004200253	S	2017	CATCCTTATTAGATGACCTTCTGACTGAATCCGAGGACATGGCCCAACGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]		
Mus musculus	RefSeq	ILMN_227166	ILMN_227166	TBL1XR1	NM_030732.2	NM_030732.2		81004	31543000	NM_030732.2	Tbl1xr1	NP_109657.2	ILMN_2784170	005570307	S	2501	CTACATGACTTCCGTCATGTCACTCTCTAAGACACATCAGCAAAGGGTGT	3	+	22402173-22402222	3qA3	Mus musculus transducin (beta)-like 1X-linked receptor 1 (Tbl1xr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		Ira1; 8030499H02Rik; A630076E03Rik; DC42; C230089I12Rik; TBLR1; AW539987; C21	Ira1; 8030499H02Rik; A630076E03Rik; DC42; C230089I12Rik; TBLR1; AW539987; C21
Mus musculus	RefSeq	ILMN_196781	ILMN_196781	IFNA4	NM_010504.1	NM_010504.1		15967	6754293	NM_010504.1	Ifna4	NP_034634.1	ILMN_2738901	006860491	S	253	ACCCAGCAGATTTTGAACCTCTTCACATCAAAAGACTTGTCTGCTACTTG	4	+	88488017-88488066	4qC4	Mus musculus interferon alpha 4 (Ifna4), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	Ifa4; MGC143607	Ifa4; MGC143607
Mus musculus	RefSeq	ILMN_215073	ILMN_215073	HIST1H3F	NM_013548.2	NM_013548.2		260423	30102949	NM_013548.2	Hist1h3f	NP_038576.1	ILMN_2725359	007150687	S	1273	AAACTTGTTACATTGTTGGCATTTCAATTATTTTTACCTTATTTTGGTTA	13	+	23637106-23637155	13qA3.1	Mus musculus histone cluster 1, H3f (Hist1h3f), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Hist1; H3.2-221	Hist1; H3.2-221
Mus musculus	RefSeq	ILMN_215073	ILMN_215073	HIST1H3F	NM_013548.2	NM_013548.2		260423	30102949	NM_013548.2	Hist1h3f	NP_038576.1	ILMN_2925169	005900400	S	1420	GAGTATACCACTGAGATGGTATTACAAGCCAGTGCTGCTACCTAGCCGAG	13	+	23637253-23637302	13qA3.1	Mus musculus histone cluster 1, H3f (Hist1h3f), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Hist1; H3.2-221	Hist1; H3.2-221
Mus musculus	RefSeq	ILMN_215073	ILMN_215073	HIST1H3F	NM_013548.2	NM_013548.2		260423	30102949	NM_013548.2	Hist1h3f	NP_038576.1	ILMN_1213473	006480564	S	410	GTACTTCCGCATACATCATAGGCATTTGAAGATTTCAACCAATCAGGAGC	13	+	23636243-23636292	13qA3.1	Mus musculus histone cluster 1, H3f (Hist1h3f), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Hist1; H3.2-221	Hist1; H3.2-221
Mus musculus	RefSeq	ILMN_222333	ILMN_215073	HIST1H3F	NM_013548.2	NM_013548.2		260423	30102949	NM_013548.2	Hist1h3f	NP_038576.1	ILMN_2748164	002600048	S	804	AGGCGAGCGAGGCCTACCTTGTGGGTCTGTTTGAGGACACCAACCTGTGC	13	+	23636637-23636686	13qA3.1	Mus musculus histone cluster 1, H3f (Hist1h3f), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Hist1; H3.2-221	Hist1; H3.2-221
Mus musculus	RefSeq	ILMN_220174	ILMN_255530	COX8C	NM_001039049.1	NM_001039049.1		75483	84794656	NM_001039049.1	Cox8c	NP_001034138.1	ILMN_2718562	004860142	S	322	GGGAAAAAGTGCCTGTTTGAACCTCCTCTGACGAGTTAGTCCTATAACTG	12	+	104138590-104138639	12qE	Mus musculus cytochrome c oxidase, subunit VIIIc (Cox8c), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]			COXVIII-3; 1700007F21Rik; COX8-3	COXVIII-3; 1700007F21Rik; COX8-3
Mus musculus	RefSeq	ILMN_215207	ILMN_215207	OSBPL11	NM_176840.2	NM_176840.2		106326	31341158	NM_176840.2	Osbpl11	NP_789810.1	ILMN_1224333	001010411	S	4318	CCGTTCTCTTAGTAGGGTTCATAGGGTGAAAACAGCGACAATGATTTTTC	16	+	33243195-33243244	16qB3	Mus musculus oxysterol binding protein-like 11 (Osbpl11), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]		AU019795; AI132306; ORP-11; 9430097N02Rik	AU019795; AI132306; ORP-11; 9430097N02Rik
Mus musculus	RefSeq	ILMN_213298	ILMN_314683	PTHR1	NM_001083936.1	NM_001083936.1		19228	145279187	NM_001083936.1	Pthr1	NP_001077405.1	ILMN_2650356	005670347	S	1916	CACGCCAAGCCGGGCGCTCCAGCCATTGAGAACGAAACCATACCAGTTAC				9qF2	Mus musculus parathyroid hormone receptor 1 (Pthr1), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with parathyroid hormone to initiate a change in cell activity [goid 4991] [evidence TAS]; Combining with parathyroid hormone to initiate a change in cell activity [goid 4991] [evidence IMP]	PTH1R; PPR; Pthr	PTH1R; PPR; Pthr
Mus musculus	RefSeq	ILMN_213298	ILMN_314683	PTHR1	NM_001083936.1	NM_001083936.1		19228	145279187	NM_001083936.1	Pthr1	NP_001077405.1	ILMN_2635728	003460220	S	788	CACAACCGGACGTGGGCCAACTACAGCGAGTGCCTCAAGTTCATGACCAA				9qF2	Mus musculus parathyroid hormone receptor 1 (Pthr1), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with parathyroid hormone to initiate a change in cell activity [goid 4991] [evidence TAS]; Combining with parathyroid hormone to initiate a change in cell activity [goid 4991] [evidence IMP]	PTH1R; PPR; Pthr	PTH1R; PPR; Pthr
Mus musculus	Riken	ILMN_202767	ILMN_202767	4833444L21RIK	ri|4833444L21|PX00029K05|AK019527|2276					AK019527	4833444L21Rik		ILMN_1213630	002570450	S	2001	GTTTGCAGCACCAGGTCAGAGGATCTGGCTCCTTATTCTGGCCTCTGGGG										
Mus musculus	RefSeq	ILMN_210413	ILMN_210413	MAN2B2	NM_008550.1	NM_008550.1		17160	6678791	NM_008550.1	Man2b2	NP_032576.1	ILMN_2605393	004120754	S	3084	CCTTCTTCATTAAATTCCAGCAGTGACATCAATGCATTGGCCCCAGGGAC	5	-	37198330-37198354:37198355-37198379	5qB3	Mus musculus mannosidase 2, alpha B2 (Man2b2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IEA]	mKIAA0935	mKIAA0935
Mus musculus	Riken	ILMN_204309	ILMN_204309	4932411N02RIK	ri|4932411N02|PX00017M09|AK029975|3333					AK029975	4932411N02Rik		ILMN_1235200	006770747	S	2824	CTTCCCCCCTAAGTCTGAACGCCATGACTTCCCACAGATCCTGAACTGAG										
Mus musculus	MEEBO	ILMN_210161	ILMN_210161	9530020G05RIK	scl29164.14.1_54	XM_145240.5			38083925	XM_145240.5	9530020G05Rik		ILMN_2602848	007150497	S	2044	TTTCGACTCTGAGGGCAATTACATGCTGACGTGCTCTGCCACAGGGGGCC										
Mus musculus	RefSeq	ILMN_192303	ILMN_226418	LOC665393	XM_976628.1	XM_976628.1		665393	94400713	XM_976628.1	LOC665393	XP_981722.1	ILMN_2486858	003140600	S	387	GGCAAAGAGCAAGCTACATTTTACATTGCTTGAGTCACAATGGTCAGTCT	16	-	86664094-86664143		PREDICTED: Mus musculus hypothetical protein LOC665393 (LOC665393), mRNA.					
Mus musculus	RefSeq	ILMN_215092	ILMN_215092	NPY6R	NM_010935.3	NM_010935.3		18169	142368817	NM_010935.3	Npy6r	NP_035065.1	ILMN_2655419	000520411	S	2471	CCTAGGGTAAACCTCCCTGATACTTATTAAATTTGACTGCAGCCTATGTG	18	+	44437258-44437307	18qB3	Mus musculus neuropeptide Y receptor Y6 (Npy6r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IDA]; Combining with gut peptide YY to initiate a change in cell activity [goid 1601] [evidence IDA]	MGC124158	MGC124158
Mus musculus	RefSeq	ILMN_211676	ILMN_211676	ZXDC	NM_173002.2	NM_173002.2		80292	141802546	NM_173002.2	Zxdc	NP_766590.1	ILMN_2618423	001940692	S	3507	GGTTGCCTTGCACATATTTGTTAGTCAAGACTGGATACAGGGTCACTCAG	6	+	90352974-90353023	6qD1	Mus musculus ZXD family zinc finger C (Zxdc), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	B930086F11Rik; BC003332; MGC7160; A930012H20	B930086F11Rik; BC003332; MGC7160; A930012H20
Mus musculus	RefSeq	ILMN_211676	ILMN_211676	ZXDC	NM_173002.2	NM_173002.2		80292	141802546	NM_173002.2	Zxdc	NP_766590.1	ILMN_2667033	001050332	S	3484	TGGTCTTCCCCGTGGAGACGGTTGGTTGCCTTGCACATATTTGTTAGTCA	6	+	90352951-90353000	6qD1	Mus musculus ZXD family zinc finger C (Zxdc), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	B930086F11Rik; BC003332; MGC7160; A930012H20	B930086F11Rik; BC003332; MGC7160; A930012H20
Mus musculus	RefSeq	ILMN_198500	ILMN_198500	LOC232889	XM_149881.2	XM_149881.2			38085869	XM_149881.2	LOC232889		ILMN_1250497	000870014	S	2669	CCCCATCCTCATTTTTCCATGGCATTCCAGATTATGGGATTCATCATGGC										
Mus musculus	RefSeq	ILMN_192022	ILMN_244339	PCDHB2	NM_053127.2	NM_053127.2		93873	113866012	NM_053127.2	Pcdhb2	NP_444357.1	ILMN_1246378	007550452	S	2402	GTGTGCCTGACTGGAGATACTGGGACCCCAGATTTCAAGTTCTTGAAACC	18	+	37456895-37456944	18qB3	Mus musculus protocadherin beta 2 (Pcdhb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbB	PcdhbB
Mus musculus	RefSeq	ILMN_192022	ILMN_244339	PCDHB2	NM_053127.2	NM_053127.2		93873	113866012	NM_053127.2	Pcdhb2	NP_444357.1	ILMN_1241712	006280364	S	2561	TAGTCTCAGCTAAAACCTGGCCCGATTGTACTGCTTTGTTAACAGAAGTT	18	+	37457054-37457103	18qB3	Mus musculus protocadherin beta 2 (Pcdhb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbB	PcdhbB
Mus musculus	MEEBO	ILMN_216708	ILMN_216708	5830406C17RIK	scl0077597.1_111				51771548	XM_488874	5830406C17Rik		ILMN_2674275	005860494	S	1744	GGTAGGGCCAGGGAGACAGTTGTGTTATTAAGGAGCCTTCCAAGCTGGGG										
Mus musculus	RefSeq	ILMN_222536	ILMN_222536	SLC25A3	NM_133668.3	NM_133668.3		18674	142376554	NM_133668.3	Slc25a3	NP_598429.1	ILMN_2751046	002340364	S	755	CGTACTGTTGAAGCTTTGTACAAATTTGTGGTTCCTAAGCCCCGAAGTGA	10	-	90580838-90580887	10qC2	Mus musculus solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3 (Slc25a3), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5730556H19Rik; Phc; PTP	5730556H19Rik; Phc; PTP
Mus musculus	Riken	ILMN_201612	ILMN_201612	0610030P10RIK	ri|0610030P10|R000004M19|AK002715|815					AK002715	0610030P10Rik		ILMN_2543198	005260669	S	631	CAAGGAGGATCGATGTTACAGAGATAAGATCCAGAGTGCCCGCTGCCTGG										
Mus musculus	RefSeq	ILMN_184534	ILMN_310231	TTC28	XM_001476544.1	XM_001476544.1		209683	149254321	XM_001476544.1	Ttc28	XP_001476594.1	ILMN_1220397	002370762	S	8006	CCGAAGTCACAGCCACAATGCAATAACTCGCGTTGAAAGCTTGCATCCCC				5qF	PREDICTED: Mus musculus tetratricopeptide repeat domain 28 (Ttc28), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189654	ILMN_214989	ASXL3	XM_140204.7	XM_140204.7		211961	149269914	XM_140204.7	Asxl3	XP_140204.7	ILMN_1242555	004490722	S	10950	GGCCTTTATCTGTGTCTGGTGGTTCCTCAGTTATAATGTGCCTATATCAC				18qA2	PREDICTED: Mus musculus additional sex combs like 3 (Drosophila) (Asxl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_206873	ILMN_214989	ASXL3	XM_140204.7	XM_140204.7		211961	149269914	XM_140204.7	Asxl3	XP_140204.7	ILMN_1217023	004230167	S	6345	GAAATTGGGTACACGTGGAGTGGATGTAGCCCTCAGTCATGCCAGGGTGC				18qA2	PREDICTED: Mus musculus additional sex combs like 3 (Drosophila) (Asxl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198256	ILMN_214989	ASXL3	XM_140204.7	XM_140204.7		211961	149269914	XM_140204.7	Asxl3	XP_140204.7	ILMN_1240804	003940431	S	744	CACTAACCTGAGGGCACTAATCAACAAGCACACCTTTGCCTCCTTCCCTC				18qA2	PREDICTED: Mus musculus additional sex combs like 3 (Drosophila) (Asxl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214989	ILMN_214989	ASXL3	XM_140204.7	XM_140204.7		211961	149269914	XM_140204.7	Asxl3	XP_140204.7	ILMN_1215297	001500209	S	1472	CTTCCAAAGTATCAGAGCCCTCCAAGTCCCCCGATGGGATAAGAAATGAC				18qA2	PREDICTED: Mus musculus additional sex combs like 3 (Drosophila) (Asxl3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196776	ILMN_196776	H2-M10.3	NM_201608.1	NM_201608.1			42475537	NM_201608.1	H2-M10.3		ILMN_1248583	005310202	S	1022	GGCATGGACAGTGCCCAGAGCATCTGATGCATCTCTCCTAGTGAAGGTAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_184383	ILMN_184383	TREH	NM_021481.2	NM_021481.2		58866	118130466	NM_021481.2	Treh	NP_067456.1	ILMN_1248603	003850639	S	1968	CACGAGGGCGGAAACTGAATCCTGATACCTAAAGTATCCTATCGGGTACC	9	+	44494313-44494362	9qA5.2	Mus musculus trehalase (brush-border membrane glycoprotein) (Treh), mRNA.	Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi [goid 5991] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: alpha,alpha-trehalose + H2O = 2 D-glucose [goid 4555] [evidence IEA]	2210412M19Rik	2210412M19Rik
Mus musculus	Riken	ILMN_204066	ILMN_204066	USP14	ri|A630085A04|PX00147L14|AK042356|659					AK042356	Usp14		ILMN_2562107	005570291	S	522	CAACTTTACTGGGTTGGTTCTCTCCTTGGATTGTGTGGGTGTCCTTGGGG						That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184942	ILMN_184942	SCL0003155.1_68	scl0003155.1_68						scl0003155.1_68		ILMN_2422875	004150647	S	16	GGAAGGGCAGTCACTGTTCTTAACTGCTGAGCCATCTCTCCAGCCCCCTT										
Mus musculus	RefSeq	ILMN_217291	ILMN_217291	SLC39A6	NM_139143.2	NM_139143.2		106957	118130001	NM_139143.2	Slc39a6	NP_631882.1	ILMN_2681516	001580678	S	2754	CTAGATGTGTTTTAAAGGGGCATGTTTAGTTCCGAGTACGTGCGTGGACA	18	-	24738862-24738911	18qA2	Mus musculus solute carrier family 39 (metal ion transporter), member 6 (Slc39a6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Ermelin	Ermelin
Mus musculus	RefSeq	ILMN_255176	ILMN_255176	LOC238829	NM_001013760.1	NM_001013760.1		238829	62000637	NM_001013760.1	LOC238829	NP_001013782.1	ILMN_2778961	000430193	S	502	TGGGAAGAGTACGGAGGAATGCCACCTGCAATCCATTTAGACTTTCAGGC	X	+	72519884-72519933	XqA7.3	Mus musculus hypothetical LOC238829 (LOC238829), mRNA.					
Mus musculus	RefSeq	ILMN_240350	ILMN_240350	MYCS	NM_010850.1	NM_010850.1		17870	6754769	NM_010850.1	Mycs	NP_034980.1	ILMN_2909454	001410427	S	959	ACACTTCGCTAGCCCTCAAATGCGTCTTCCGGCCAAAGGCTCCGAGGTTG	X	-	5045134-5045183	XqA1.1	Mus musculus myc-like oncogene, s-myc protein (Mycs), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MGC151451	MGC151451
Mus musculus	RefSeq	ILMN_187870	ILMN_231005	ABL1	NM_009594.2	NM_009594.2		11350	141803247	NM_009594.2	Abl1	NP_033724.1	ILMN_2742730	004670328	S	71	TTGAAGTTGGTGGGCTGCAAATCCAAGAAGGGGCTCTCTTCGTCCTCCAG	2	+	31615572-31615621	2qB	Mus musculus v-abl Abelson murine leukemia oncogene 1 (Abl1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	MGC117749; AI325092; c-Abl; Abl; E430008G22Rik	MGC117749; AI325092; c-Abl; Abl; E430008G22Rik
Mus musculus	RefSeq	ILMN_187870	ILMN_231005	ABL1	NM_009594.2	NM_009594.2		11350	141803247	NM_009594.2	Abl1	NP_033724.1	ILMN_2675551	001940438	S	973	CCGGGAACCACCATTCTACATAATCACTGAGTTCATGACCTATGGGAACC	2	+	31646192-31646241	2qB	Mus musculus v-abl Abelson murine leukemia oncogene 1 (Abl1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	MGC117749; AI325092; c-Abl; Abl; E430008G22Rik	MGC117749; AI325092; c-Abl; Abl; E430008G22Rik
Mus musculus	RefSeq	ILMN_208873	ILMN_208873	MYLIP	NM_153789.3	NM_153789.3		218203	118130050	NM_153789.3	Mylip	NP_722484.2	ILMN_2735102	003400386	S	2916	ATATTAGCATATAAGCCTTTATTCCAAGAGGTATTTATTTTTTCACTTGT	13	+	45507242-45507291	13qA5	Mus musculus myosin regulatory light chain interacting protein (Mylip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC11702; Mir; 9430057C20Rik	MGC11702; Mir; 9430057C20Rik
Mus musculus	RefSeq	ILMN_208873	ILMN_208873	MYLIP	NM_153789.3	NM_153789.3		218203	118130050	NM_153789.3	Mylip	NP_722484.2	ILMN_2590339	001470184	S	1163	GAGAACATCCAAAGAGGTCTATGACCATGCCAGGAGGGCTCTGTACAACG	13	+	45503845-45503894	13qA5	Mus musculus myosin regulatory light chain interacting protein (Mylip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC11702; Mir; 9430057C20Rik	MGC11702; Mir; 9430057C20Rik
Mus musculus	RefSeq	ILMN_223899	ILMN_260938	LOC669660	XM_976375.1	XM_976375.1		669660	94371335	XM_976375.1	LOC669660	XP_981469.1	ILMN_2771219	004640717	S	72	GGACGTGGTTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATC					PREDICTED: Mus musculus similar to PDZ and LIM domain protein 5 (Enigma homolog) (Enigma-like PDZ and LIM domains protein) (LOC669660), mRNA.					
Mus musculus	RefSeq	ILMN_198238	ILMN_198238	LOC243311	XM_144609.2	XM_144609.2			38083216	XM_144609.2	LOC243311		ILMN_2530970	002470475	S	463	CACCATGAACAGTGTCAGAAGTCCCAGGAAGAGCAGCTTATGGAGTACAG										
Mus musculus	RefSeq	ILMN_216446	ILMN_216446	SIRT6	NM_181586.2	NM_181586.2		50721	31795585	NM_181586.2	Sirt6	NP_853617.1	ILMN_2684909	007150544	S	706	CTAAGCGCCGAGGAGGCCGTCTGGTCATTGTCAACCTGCAACCCACAAAA	10	-	81085497-81085546	10qC1	Mus musculus sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae) (Sirt6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	2810449N18Rik; AI043036	2810449N18Rik; AI043036
Mus musculus	RefSeq	ILMN_216446	ILMN_216446	SIRT6	NM_181586.2	NM_181586.2		50721	31795585	NM_181586.2	Sirt6	NP_853617.1	ILMN_2684910	005870082	S	707	TAAGCGCCGAGGAGGCCGTCTGGTCATTGTCAACCTGCAACCCACAAAAC	10	-	81085496-81085545	10qC1	Mus musculus sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae) (Sirt6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	2810449N18Rik; AI043036	2810449N18Rik; AI043036
Mus musculus	RefSeq	ILMN_216446	ILMN_216446	SIRT6	NM_181586.2	NM_181586.2		50721	31795585	NM_181586.2	Sirt6	NP_853617.1	ILMN_2671176	003870682	S	1549	TGACACAGAGCCACCAAGGGCCCACCAGGCACCCATCTGTGCTAAGGGCC	10	-	81084585-81084634	10qC1	Mus musculus sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae) (Sirt6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	2810449N18Rik; AI043036	2810449N18Rik; AI043036
Mus musculus	RefSeq	ILMN_189434	ILMN_250455	POLR1E	NM_022811.2	NM_022811.2		64424	84872197	NM_022811.2	Polr1e	NP_073722.1	ILMN_2709047	003780132	S	1493	GGACTCCATCATGCTCCACCACACCCCCGAGGCCTTACTTTAGGGTGGTT	4	+	45045113-45045162	4qB1	Mus musculus polymerase (RNA) I polypeptide E (Polr1e), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Praf1; D030019D19Rik; AU042259; 53kDa; Paf53	Praf1; D030019D19Rik; AU042259; 53kDa; Paf53
Mus musculus	Riken	ILMN_206499	ILMN_206499	D630013A16RIK	ri|D630013A16|PX00196F15|AK085335|3372					AK085335	D630013A16Rik		ILMN_1259192	006370445	S	3080	GGTACACTTTGGTTGGTGGTTTAGTTCCTGGGAGCTTTGGGGGAGAGCGG										
Mus musculus	RefSeq	ILMN_193201	ILMN_243255	OLFR152	NM_146646.2	NM_146646.2		258640	122056739	NM_146646.2	Olfr152	NP_666857.2	ILMN_1258236	006100746	S	758	CCATCTATCAGGGCACACTTCTCTTCATTTATTCTCGTCCCAGCTCCCTC	2	+	87623450-87623499	2qD	Mus musculus olfactory receptor 152 (Olfr152), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	V1; Olfr4-1; MOR181-1	V1; Olfr4-1; MOR181-1
Mus musculus	RefSeq	ILMN_220328	ILMN_220328	ABCA6	NM_147218.1	NM_147218.1		76184	22267461	NM_147218.1	Abca6	NP_671751.1	ILMN_2965613	006180397	S	4857	GTCTCAGGCCTTCCATAAACTAGAAGCAGTGAAGCATGGCTTTGACCTGG	11	-	110038532-110038553:110040086-110040113	11qE1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 6 (Abca6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	6330565N06Rik	6330565N06Rik
Mus musculus	RefSeq	ILMN_220328	ILMN_220328	ABCA6	NM_147218.1	NM_147218.1		76184	22267461	NM_147218.1	Abca6	NP_671751.1	ILMN_2720640	003310324	S	2088	CCTACTGTAGGACTCGATCCCTTTTCGAGGCAGCGAATATGGGGTTTCCT	11	-	110080248-110080297	11qE1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 6 (Abca6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	6330565N06Rik	6330565N06Rik
Mus musculus	RefSeq	ILMN_220328	ILMN_220328	ABCA6	NM_147218.1	NM_147218.1		76184	22267461	NM_147218.1	Abca6	NP_671751.1	ILMN_2965612	004830209	S	4928	GCACACTGGACAGAGTAATTTTGGAGCTTTCGAAGGAACAGGAGCTGGGA	11	-	110038348-110038384:110038498-110038510	11qE1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 6 (Abca6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	6330565N06Rik	6330565N06Rik
Mus musculus	RefSeq	ILMN_204412	ILMN_236431	6030446N20RIK	NM_178801.4	NM_178801.4		338363	148747426	NM_178801.4	6030446N20Rik	NP_848916.2	ILMN_1226917	005570022	S	856	GTTGACCATATGCTACTGTTTGCAGCTTCCTGCTTGGTGGACTTGGCGAG				18qA1	Mus musculus RIKEN cDNA 6030446N20 gene (6030446N20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_209162	ILMN_209162	TMCO3	NM_172282.2	NM_172282.2		234076	85861263	NM_172282.2	Tmco3	NP_758486.1	ILMN_2652644	002060064	S	2743	CTGGATGTGCCTTTTTTAATGAAAATTATTAACTTCCATTTGTTAATTTA	8	+	13321134-13321183	8qA1.1	Mus musculus transmembrane and coiled-coil domains 3 (Tmco3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]	B230339H12Rik; C87304	B230339H12Rik; C87304
Mus musculus	RefSeq	ILMN_209162	ILMN_209162	TMCO3	NM_172282.2	NM_172282.2		234076	85861263	NM_172282.2	Tmco3	NP_758486.1	ILMN_2593122	000290646	S	1876	TCATGAAGACGTATCTCATAGGACCGTATTATCGAAAGCTGCACCTGGAG	8	+	13310228-13310277	8qA1.1	Mus musculus transmembrane and coiled-coil domains 3 (Tmco3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]	B230339H12Rik; C87304	B230339H12Rik; C87304
Mus musculus	RefSeq	ILMN_209162	ILMN_209162	TMCO3	NM_172282.2	NM_172282.2		234076	85861263	NM_172282.2	Tmco3	NP_758486.1	ILMN_2628745	000020400	S	2156	CACCTTTGTGATCTATGAGTTGACGGTGCTGGTGTTCCTCACCCTGTCCG	8	+	13318859-13318908	8qA1.1	Mus musculus transmembrane and coiled-coil domains 3 (Tmco3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]	B230339H12Rik; C87304	B230339H12Rik; C87304
Mus musculus	RefSeq	ILMN_192015	ILMN_248138	1110032F04RIK	XM_485253.3	XM_485253.3		68725	94369641	XM_485253.3	1110032F04Rik	XP_485253.3	ILMN_2484234	005700762	S	2908	TGAAAAAGTCTGATGTCCTGGGAACTTTTTTAATGTATGGATTATAATAA	3	+	68675943-68675992	3qE1	PREDICTED: Mus musculus RIKEN cDNA 1110032F04 gene (1110032F04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_231580	ILMN_231580	ARHGEF2	NM_008487.2	NM_008487.2		16800	47271403	NM_008487.2	Arhgef2	NP_032513.2	ILMN_2782446	003460379	S	2833	CATGACCGCCTGGATTTGCCTGTGACTGTTCGTTCCCTCCACCGACCCTT	3	+	88450110-88450159	3qF1	Mus musculus rho/rac guanine nucleotide exchange factor (GEF) 2 (Arhgef2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IPI]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IDA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]	P40; GEF; LFP40; mKIAA0651; AA408978; Lfc; Lbcl1; GEF-H1; GEFH1	P40; GEF; LFP40; mKIAA0651; AA408978; Lfc; Lbcl1; GEF-H1; GEFH1
Mus musculus	RefSeq	ILMN_217432	ILMN_231580	ARHGEF2	NM_008487.2	NM_008487.2		16800	47271403	NM_008487.2	Arhgef2	NP_032513.2	ILMN_1217110	001710398	S	3031	GAAGAGACAGAAAGCCGAGATGGGGAGCCCACAGCTTCAGAGAGCTAAGG	3	+	88450737-88450785:88450786-88450786	3qF1	Mus musculus rho/rac guanine nucleotide exchange factor (GEF) 2 (Arhgef2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IPI]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IDA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]	P40; GEF; LFP40; mKIAA0651; AA408978; Lfc; Lbcl1; GEF-H1; GEFH1	P40; GEF; LFP40; mKIAA0651; AA408978; Lfc; Lbcl1; GEF-H1; GEFH1
Mus musculus	Riken	ILMN_206512	ILMN_206512	D830019K05RIK	ri|D830019K05|PX00198L10|AK085862|3125					AK085862	D830019K05Rik		ILMN_1214855	006960021	S	3001	CCAGGCAGTGGTGGCACATGCATTTAATCCCAGCAAGGCAGAGCAGGAGG										
Mus musculus	RefSeq	ILMN_235165	ILMN_235165	NLRC3	NM_001081280.1	NM_001081280.1		268857	124486872	NM_001081280.1	Nlrc3	NP_001074749.1	ILMN_2808722	001090224	S	520	TCCCCACTAGGATCCCAGAGCAATGAGTCAAGGATACCGAAGCACTCTGA	16	-	3965277-3965302:3965400-3965423	16qA1	Mus musculus NLR family, CARD domain containing 3 (Nlrc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISS]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence ISS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC161259; D230007K08Rik; mFLJ00348; FLJ00348; CLR16.2	MGC161259; D230007K08Rik; mFLJ00348; FLJ00348; CLR16.2
Mus musculus	RefSeq	ILMN_215896	ILMN_215896	CCDC12	NM_028312.2	NM_028312.2		72654	141802309	NM_028312.2	Ccdc12	NP_082588.1	ILMN_1213231	002940563	S	420	GGCCAAGAAGCTAGAGAAGCTAGAAAAGCGGACCCAGAGAGCCATCGCGG	9	+	110613608-110613657	9qF2	Mus musculus coiled-coil domain containing 12 (Ccdc12), mRNA.				2700094L05Rik; C76605	2700094L05Rik; C76605
Mus musculus	RefSeq	ILMN_212587	ILMN_212587	KRTAP13	NM_010671.1	NM_010671.1		16699	6754491	NM_010671.1	Krtap13	NP_034801.1	ILMN_2628157	000270397	S	565	TCCCTTCTAGGGATTTCTATTCTTGTTATCAGCCACTCTACACATCTCGC	16	-	88751259-88751308	16qC3.3	Mus musculus keratin associated protein 13 (Krtap13), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			4C32	4C32
Mus musculus	RefSeq	ILMN_212587	ILMN_212587	KRTAP13	NM_010671.1	NM_010671.1		16699	6754491	NM_010671.1	Krtap13	NP_034801.1	ILMN_1240657	001110619	S	567	CCCTTCTAGGGATTTCTATTCTTGTTATCAGCCACTCTACACATCTCGCT	16	-	88751257-88751306	16qC3.3	Mus musculus keratin associated protein 13 (Krtap13), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			4C32	4C32
Mus musculus	RefSeq	ILMN_216684	ILMN_216684	SMYD2	NM_026796.1	NM_026796.1		226830	30840983	NM_026796.1	Smyd2	NP_081072.1	ILMN_2674001	002600086	S	660	CAAAGGGACCCTGGCAGAAGTCAGAGCTGTACAGGAGATCCACCCAGGAG	1	-	191712698-191712747	1qH6	Mus musculus SET and MYND domain containing 2 (Smyd2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1110020E07Rik; Zmynd14; 4930402C15	1110020E07Rik; Zmynd14; 4930402C15
Mus musculus	RefSeq	ILMN_216684	ILMN_216684	SMYD2	NM_026796.1	NM_026796.1		226830	30840983	NM_026796.1	Smyd2	NP_081072.1	ILMN_2957161	005720050	S	1192	CTGGAAAACAAAGCGGCCGGCGAGAAGGCCCTGAAGAAGGCCATTGCCAT	1	-	191704734-191704745:191705988-191706025	1qH6	Mus musculus SET and MYND domain containing 2 (Smyd2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1110020E07Rik; Zmynd14; 4930402C15	1110020E07Rik; Zmynd14; 4930402C15
Mus musculus	RefSeq	ILMN_235384	ILMN_235384	LOC545238	NM_001034897.1	NM_001034897.1		545238	85702255	NM_001034897.1	LOC545238	NP_001030069.1	ILMN_2946959	002030482	S	2228	GGGTAAGAAGTTGTGTGTTGGACCCAGGCATGCTTCGAGGCCCTTGCTAG	18	+	3473855-3473904		Mus musculus similar to protease (LOC545238), mRNA.					
Mus musculus	Riken	ILMN_207140	ILMN_207140	1300010F03RIK	ri|F730029G24|PL00003B03|AK089438|3826					AK089438	1300010F03Rik		ILMN_1219587	007320445	S	3602	CCTGTAACACGGCCTAACATGACATCAGCATGCGAACTTACCATGGCTTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	Riken	ILMN_207253	ILMN_207253	F830033M10RIK	ri|F830033M10|PL00007A09|AK089857|1854					AK089857	F830033M10Rik		ILMN_2586196	001230156	S	1467	CCTACAGATTGGGAAAAATCTTCACTAACCCCACATCCAATAGAGGGCTG										
Mus musculus	MEEBO	ILMN_185222	ILMN_185222	SCL0070954.1_214	scl0070954.1_214	AK082371.1			26100616	AK082371.1	scl0070954.1_214		ILMN_2425193	002690433	S	3	GGTAAGCTATGGACCCCCATCCCCAATTGGTTATTTTATCTTAGTTATCA										
Mus musculus	Riken	ILMN_206719	ILMN_206719	ADAM22	ri|C230039C17|PX00174P19|AK082335|2322					AK082335	Adam22		ILMN_1217798	002000079	S	1874	CCCTTTTATAGCTACATTTGTGGCTTTGAGCATCTAGTACAGTGCTGCGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	Riken	ILMN_203700	ILMN_203700	9630012C05RIK	ri|9630012C05|PX00115E08|AK035864|2999					AK035864	9630012C05Rik		ILMN_2559313	000270161	S	2660	CCCAGGTGGGAACTTGTTATATAGTCAAAGTGGGTTTTATGGCGCTGAGG										
Mus musculus	Riken	ILMN_205348	ILMN_205348	B230337K13RIK	ri|B230337K13|PX00160E14|AK046047|2502					AK046047	B230337K13Rik		ILMN_1239573	003800692	S	2072	CCAAGGAAAAGGGTTGGTGACTTGAACCCCTCACAGGATGCCAAAGGAGT										
Mus musculus	RefSeq	ILMN_212465	ILMN_254940	2410012M07RIK	XM_486251.3	XM_486251.3		71979	94386334	XM_486251.3	2410012M07Rik	XP_486251.1	ILMN_2626768	001110369	S	1726	TTTTTGCTCTTATAAACCTAATTTGTAATGTTTTGTATGCAATGGTCATA	9	+	98766911-98766960	9qE3.3	PREDICTED: Mus musculus RIKEN cDNA 2410012M07 gene (2410012M07Rik), mRNA.					
Mus musculus	MEEBO	ILMN_208681	ILMN_208681	1200016D23RIK	scl000974.1_4	NM_028776.3			31044496	NM_028776.3	1200016D23Rik		ILMN_1235616	000020719	S	1530	AAGTCTTGGAGGACCCCTCGTCTAACGTATTCCCTAAATGGTTGTCTGGC										
Mus musculus	Riken	ILMN_203478	ILMN_203478	6430544C07RIK	ri|6430544C07|PX00046J14|AK032429|2948					AK032429	6430544C07Rik		ILMN_1219107	003420634	S	2753	TGGTCGTAGAATTTGAGGCCAGCCTGAGTTACCTGAGACACCCCCACCCC										
Mus musculus	RefSeq	ILMN_214138	ILMN_331077	1700049L16RIK	NR_003644.1	NR_003644.1		108950	153792577	NR_003644.1	1700049L16Rik		ILMN_1215184	006980110	S	736	GCTGTCATTGGAAGAGCTGCCCAGAGGACTGTGCCTTCTAGACTGCCAAG				10qB5.3	Mus musculus RIKEN cDNA 1700049L16 gene (1700049L16Rik), non-coding RNA.					
Mus musculus	RefSeq	ILMN_220535	ILMN_232672	STK35	NM_001038635.1	NM_001038635.1		67333	84490408	NM_001038635.1	Stk35	NP_001033724.1	ILMN_2723355	002480612	S	1038	ATAATAATTGTTTTTCTAAACATTAAACCATCAAGACTTCTGAAGAGCAG	2	+	129653660-129653709	2qF1	Mus musculus serine/threonine kinase 35 (Stk35), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	1700054C12Rik; CLIK1	1700054C12Rik; CLIK1
Mus musculus	RefSeq	ILMN_223390	ILMN_223390	MAGEA1	NM_020015.1	NM_020015.1		17137	21426894	NM_020015.1	Magea1	NP_064399.1	ILMN_2763422	005550300	S	873	GTATGCAGAGGCTTTGCGAGATGAGATATACAGGACCAAGGCCTGGATCT	X	-	151523349-151523398	XqF3	Mus musculus melanoma antigen, family A, 1 (Magea1), mRNA.				Mage-a1	Mage-a1
Mus musculus	RefSeq	ILMN_218942	ILMN_218942	TAS2R119	NM_020503.2	NM_020503.2		57254	154090950	NM_020503.2	Tas2r119	NP_065249.2	ILMN_1231441	003710253	S	765	CCTTTGCATTCTGCTTATTGGTTATTGGTATGTACCCCTCCTTACACTCG				15qB3.1	Mus musculus taste receptor, type 2, member 119 (Tas2r119), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence TAS]	Tas2r19; mGR19; T2r19; mt2r19	Tas2r19; mGR19; T2r19; mt2r19
Mus musculus	RefSeq	ILMN_198772	ILMN_317303	LOC100047902	XM_001479095.1	XM_001479095.1		100047902	149258025	XM_001479095.1	LOC100047902	XP_001479145.1	ILMN_1232230	003170670	S	540	GCTCACCGAGCAGAGACAGGACCAAAGGAAGACTCCAAAGTTCACCAGCC					PREDICTED: Mus musculus similar to RIKEN cDNA 1700022C21 gene (LOC100047902), mRNA.					
Mus musculus	RefSeq	ILMN_215357	ILMN_232860	SNX29	NM_028964.3	NM_028964.3		74478	146141196	NM_028964.3	Snx29	NP_083240.1	ILMN_1214294	000630390	S	195	GGTGCTTCATGGAGATGCGGATGCTGACACTGATGTACTCTTCCCTGTCA				16qA1	Mus musculus sorting nexin 29 (Snx29), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215357	ILMN_232860	SNX29	NM_028964.3	NM_028964.3		74478	146141196	NM_028964.3	Snx29	NP_083240.1	ILMN_1222361	003170630	S	1255	CGCAGCGTCATGAACAAGGTCATCCAGATGGTGCCTGAGTTTGCTGCCAA				16qA1	Mus musculus sorting nexin 29 (Snx29), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_205708	ILMN_205708	B430218F22RIK	ri|B430218F22|PX00071L05|AK046645|1496					AK046645	B430218F22Rik		ILMN_1237357	003890079	S	887	CGCACTTTTTTTCACACGCAAACATTCAGAAATATCCTCCAGCCGGGCGG										
Mus musculus	RefSeq	ILMN_256410	ILMN_256410	EIF4G1	NM_145941.2	NM_145941.2		208643	56699431	NM_145941.2	Eif4g1	NP_666053.2	ILMN_3159387	001340736	A	5095	TGAGCTAATAAAGTGGCTGATGAGGCAGGATGGCTTGGGGCTGCCTGGGC	16	+	20692634-20692683	16qB1	Mus musculus eukaryotic translation initiation factor 4, gamma 1 (Eif4g1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E030015G23Rik; MGC90776; MGC37551; eIF4GI	E030015G23Rik; MGC90776; MGC37551; eIF4GI
Mus musculus	MEEBO	ILMN_221228	ILMN_221228	9830002I17RIK	scl39967.13.1_225	XM_126365.3			38091457	XM_126365.3	9830002I17Rik		ILMN_2732757	006270634	S	1993	ACCATCCTTTAGGGAGTCTGGGCCCTGTGTCTACACCCTCCAGGGAGACC										
Mus musculus	Riken	ILMN_203856	ILMN_203856	A630006M12RIK	ri|A630006M12|PX00144E12|AK041395|3076					AK041395	A630006M12Rik		ILMN_2560480	006940543	S	2457	CTGATGCTAGGGAAGATAGGTGCCGAGTCTGTGGTGGGGATGGAAGCACC										
Mus musculus	RefSeq	ILMN_195642	ILMN_231155	SAMM50	NM_178614.2	NM_178614.2		68653	31340840	NM_178614.2	Samm50	NP_848729.1	ILMN_2595106	004780709	S	3276	AGCCCCTTGGGGGATATTCTTAGCTTTAAAAAACTGACATAAGCTGGGCA	15	+	84043679-84043728	15qE2	Mus musculus sorting and assembly machinery component 50 homolog (S. cerevisiae) (Samm50), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites [goid 19867] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]			1110030L07Rik	1110030L07Rik
Mus musculus	RefSeq	ILMN_191674	ILMN_191674	UCP2	NM_011671.2	NM_011671.2		22228	31543919	NM_011671.2	Ucp2	NP_035801.2	ILMN_2509798	003170504	S	16	GGCAGTAGGATAACTTGATCCCAAGGGTTTGGGGACAGCAGGGACAAGAC	7	+	100367461-100367510	7qE3	Mus musculus uncoupling protein 2 (mitochondrial, proton carrier) (Ucp2), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Slc25a8	Slc25a8
Mus musculus	RefSeq	ILMN_191674	ILMN_191674	UCP2	NM_011671.2	NM_011671.2		22228	31543919	NM_011671.2	Ucp2	NP_035801.2	ILMN_2855123	006130180	S	3543	GTCCTAGGTTCCAGACCCAGGGCCCACACTATAGCTCACAACCATCTGTT	7	+	100375684-100375733	7qE3	Mus musculus uncoupling protein 2 (mitochondrial, proton carrier) (Ucp2), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Slc25a8	Slc25a8
Mus musculus	RefSeq	ILMN_200900	ILMN_200900	LOC385458	XM_358240.1	XM_358240.1			38086913	XM_358240.1	LOC385458		ILMN_1254893	006370437	S	520	GCAGTCGCTGTCACCATGCCTGTTTCCACCCTTATCCTACTGCATCCATG										
Mus musculus	Riken	ILMN_205122	ILMN_205122	CSPG5	ri|E130318K13|PX00208L18|AK053891|4260					AK053891	Cspg5		ILMN_2570160	005870440	S	4120	GTGATAGCACATCCCTGTAATGCCAGTACTTGAAAGGGCCGAGGCAGAAG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]			
Mus musculus	MEEBO	ILMN_188287	ILMN_188287	DPYSL2	scl45397.1_353				40254594	NM_009955	Dpysl2		ILMN_2451389	003190474	S	20	AAGCATTCCGGAGGGCGAGGAGAGACTGGGTGACATAATGAGATCATCCC						A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188287	ILMN_188287	DPYSL2	scl45397.1_353				40254594	NM_009955	Dpysl2		ILMN_1240571	001010278	S	2038	TAAAGAGCCTGTGATAGTTGCTGTGGGCAGCCAGTTCCTGGGGCTTCCTC						A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184381	ILMN_184381	PPIFS	scl45801.3.1_22						Ppifs		ILMN_1213066	004780441	S	12	GGGCCAACAAAACTAAAACCAAGCTTCTGCATTTGTAACCATGCCGTAAC										
Mus musculus	RefSeq	ILMN_198530	ILMN_198530	LOC209100	XM_141598.2	XM_141598.2			28527654	XM_141598.2	LOC209100		ILMN_2532012	007100719	S	546	GTCAGTATCCTGCTCAGATGTGATGGGGAGAGGAAGGCATGTTTGGCTGG										
Mus musculus	MEEBO	ILMN_223976	ILMN_223976	2610034E18RIK	scl076915.3_6				37591184	NM_029797	2610034E18Rik		ILMN_2772523	000990156	S	408	GAACTTTCTTCATTTCGAGACCAAAGGCAACAACTTAAGGCAGAAGTGGA										
Mus musculus	Riken	ILMN_204496	ILMN_204496	B230325K09RIK	ri|B230325K09|PX00160A24|AK045943|2083					AK045943	B230325K09Rik		ILMN_2565428	006380053	S	1752	TGCCTGCTATTCCAGCCTCAGAGAAAAAGAGTCTCTGCGAAATACTTAGG										
Mus musculus	RefSeq	ILMN_187403	ILMN_220657	RIPK5	NM_172516.4	NM_172516.4		213452	124301222	NM_172516.4	Ripk5	NP_766104.2	ILMN_2443840	000290129	S	6103	ACATATTAAGTGTATAGAATAAAGGGCAATAACAAAAATTTACTCGACAC	1	+	134363254-134363303	1qE4	Mus musculus receptor interacting protein kinase 5 (Ripk5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	A930019K20Rik; C430014H23Rik; C820013G01	A930019K20Rik; C430014H23Rik; C820013G01
Mus musculus	RefSeq	ILMN_220657	ILMN_220657	RIPK5	NM_172516.4	NM_172516.4		213452	124301222	NM_172516.4	Ripk5	NP_766104.2	ILMN_2724910	002030093	S	2596	GCCCCTGAACTTTTCACAGGAAAGTATGATAACTCTGTGGACGTCTATGC	1	+	134356549-134356567:134359490-134359520	1qE4	Mus musculus receptor interacting protein kinase 5 (Ripk5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	A930019K20Rik; C430014H23Rik; C820013G01	A930019K20Rik; C430014H23Rik; C820013G01
Mus musculus	RefSeq	ILMN_220657	ILMN_220657	RIPK5	NM_172516.4	NM_172516.4		213452	124301222	NM_172516.4	Ripk5	NP_766104.2	ILMN_1260093	002630563	S	2650	GGGATCCTTTTTTGGTATATCTGCTCCGGCTCTATCAAGCTCCCTGAGGC	1	+	134359525-134359574	1qE4	Mus musculus receptor interacting protein kinase 5 (Ripk5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	A930019K20Rik; C430014H23Rik; C820013G01	A930019K20Rik; C430014H23Rik; C820013G01
Mus musculus	RefSeq	ILMN_219359	ILMN_229555	2010003K11RIK	NM_027237.1	NM_027237.1		69861	58037184	NM_027237.1	2010003K11Rik	NP_081513.1	ILMN_1220873	003140255	S	626	CTTAGCAAAGATCTCCATAGGCCTGAAGAGGAAATACCTGGCTCTCTACC	19	-	4497279-4497328	19qA	Mus musculus RIKEN cDNA 2010003K11 gene (2010003K11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200845	ILMN_200845	LOC381872	XM_358666.1	XM_358666.1			38086520	XM_358666.1	LOC381872		ILMN_1237035	006380296	S	208	CACGGTCACCCTTGTCGGGCAGGCTCAAATCAAGGCCTAATCCGGCCATA										
Mus musculus	RefSeq	ILMN_190311	ILMN_190311	TNNT3	NM_011620.2	NM_011620.2		21957	142378065	NM_011620.2	Tnnt3	NP_035750.1	ILMN_2469018	000110707	S	790	GCCAAGGGCAAAGTCGGTGGGCGCTGGAAGTAAAAGAGCAGAGAGGTGCA	7	+	149701703-149701735:149701736-149701752	7qF5	Mus musculus troponin T3, skeletal, fast (Tnnt3), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	fTnT	fTnT
Mus musculus	RefSeq	ILMN_211297	ILMN_211297	OLFR970	NM_146611.1	NM_146611.1		258604	33239223	NM_146611.1	Olfr970	NP_666822.1	ILMN_2614403	002100603	S	751	TCTTCGGTTCCCTTGCATTCATGTACTTGCAGCCATCATCAGTCAGCTCC	9	+	39627976-39628025	9qA5.1	Mus musculus olfactory receptor 970 (Olfr970), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-16	MOR171-16
Mus musculus	MEEBO	ILMN_212718	ILMN_212718	CALML4	scl36843.5.19_46	NM_138304.1			23956267	NM_138304.1	Calml4		ILMN_1246573	004850754	S	508	GACTACTAAGGGAGCCAAGATCAAGAGAGCAGATGAGAGCCTTCGGGGCC								Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214605	ILMN_214605	RSAD2	NM_021384.3	NM_021384.3		58185	142370736	NM_021384.3	Rsad2	NP_067359.2	ILMN_1225204	005560474	S	3514	CAGCAGTTAGCTCCTTACCGCAGTAACTCAGCTCATGGACTGCCCTCTTG	12	-	27127808-27127857	12qA2	Mus musculus radical S-adenosyl methionine domain containing 2 (Rsad2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IDA]	Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2510004L01Rik; cig5; Vig1	2510004L01Rik; cig5; Vig1
Mus musculus	RefSeq	ILMN_217646	ILMN_217646	HTRA3	NM_030127.2	NM_030127.2		78558	110815868	NM_030127.2	Htra3	NP_084403.2	ILMN_2685879	002970470	S	1450	CCCCTCAGATCGCATCACACGCTTCCTCTCTGAGTTCCAAAACAAGCATG	5	-	36006617-36006666	5qB3	Mus musculus HtrA serine peptidase 3 (Htra3), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2210021K23Rik; 9530081K03Rik; Prsp; Tasp	2210021K23Rik; 9530081K03Rik; Prsp; Tasp
Mus musculus	RefSeq	ILMN_222728	ILMN_222728	2310003L06RIK	XM_144408.5	XM_144408.5		74248	94374890	XM_144408.5	2310003L06Rik	XP_144408.3	ILMN_2753941	000630246	S	1529	GGAAACATCATTGACCTTCGAGATGGCTATCAAAACCCTATTGATGTCAC	5	+	88401821-88401870	5qE1	PREDICTED: Mus musculus RIKEN cDNA 2310003L06 gene (2310003L06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_250920	ILMN_250920	SMCR7L	NM_178719.3	NM_178719.3		239555	32129231	NM_178719.3	Smcr7l	NP_848834.2	ILMN_2940785	003290541	S	3712	GGATGCCAGGCAGAGTGCAAATGAACCCCCAGAACTTGAAGATGCTCAAG	15	+	80079292-80079341	15qE1	Mus musculus Smith-Magenis syndrome chromosome region, candidate 7-like (human) (Smcr7l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A230016E22; AI452372	A230016E22; AI452372
Mus musculus	RefSeq	ILMN_219916	ILMN_219916	STXBP3A	NM_011504.1	NM_011504.1		20912	6755689	NM_011504.1	Stxbp3a	NP_035634.1	ILMN_2715195	006280066	S	2314	AACACAATTTTATATGTTTGAGATCATGTCTGCTTAAGTTAGACGCCAAA	3	-	108596140-108596189	3qF3	Mus musculus syntaxin binding protein 3A (Stxbp3a), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IDA]	Sxtbp3; Stxbp3; Munc-18c; MGC86097	Sxtbp3; Stxbp3; Munc-18c; MGC86097
Mus musculus	Riken	ILMN_203058	ILMN_203058	A930035G08RIK	ri|A930035G08|PX00067M02|AK044714|2155					AK044714	A930035G08Rik		ILMN_1239551	000830241	S	1753	GTGCTGTTGGCAGGCAGGGGAAGCCAGTGTCAGGCCTTTAATTCTAGGAC										
Mus musculus	RefSeq	ILMN_216689	ILMN_216689	IWS1	NM_173441.2	NM_173441.2		73473	142348986	NM_173441.2	Iws1	NP_775617.1	ILMN_2674060	006100139	S	2138	GTCTCGGCCCATATTTGGTCTTACCTCAAACTATAAAGGAATGACAAGAG	18	+	32250090-32250139	18qB1	Mus musculus IWS1 homolog (S. cerevisiae) (Iws1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1700069O15Rik; 3000008H23	1700069O15Rik; 3000008H23
Mus musculus	Riken	ILMN_203662	ILMN_203662	FMO1	ri|9430065D03|PX00110G12|AK034946|3107					AK034946	Fmo1		ILMN_1250917	005490048	S	2938	GCTGCAAGTCTGAGGCCAGTCTGGGTTACATAGTGGAACTCTGTCGAGTC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196255	ILMN_315631	LOC100040085	XM_001474059.1	XM_001474059.1		100040085	149264222	XM_001474059.1	LOC100040085	XP_001474109.1	ILMN_1259213	001780451	S	217	CACTGCAGTGGATGCCTCCTGTAAGCTGTGTCCTCCTGGGTTGCATGGAG	13	+	50213431-50213454:50213455-50213480	13qA5	PREDICTED: Mus musculus hypothetical protein LOC100040085 (LOC100040085), mRNA.					
Mus musculus	Riken	ILMN_204837	ILMN_204837	A130015P11RIK	ri|A130015P11|PX00121F05|AK079475|2122					AK079475	A130015P11Rik		ILMN_1233210	000580288	S	1797	CATTCAGGGAGGGGCCTATGAGTCTGGTCAGTTTCTGGGATTTCCTGAAG										
Mus musculus	RefSeq	ILMN_192914	ILMN_214911	NRG1	NM_178591.2	NM_178591.2		211323	124377985	NM_178591.2	Nrg1	NP_848706.2	ILMN_1225579	004610730	S	310	TTCGAATACGACTCTCCTACCCACCTTGACCCTGGGGGGTTAGGCCAGGA	8	-	33028316-33028365	8qA3	Mus musculus neuregulin 1 (Nrg1), mRNA. XM_900811 XM_900817 XM_900821 XM_900824 XM_900832 XM_900835 XM_912993 XM_922562 XM_922570 XM_922577 XM_922594 XM_922603 XM_922607 XM_922617 XM_922623 XM_922629 XM_922636 XM_986275 XM_986302 XM_986330 XM_986362 XM_986394 XM_986425 XM_986458 XM_986492 XM_986565 XM_986605 XM_986645 XM_986682 XM_986725 XM_988214 XM_990248 XM_990278	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The disaggregation of a protein complex into its constituent components, occurring at the level of an individual cell. Protein complexes may have other associated non-protein prosthetic groups, such as nucleic acids, metal ions or carbohydrate groups [goid 43624] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]	The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence ISO]; Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [evidence IDA]; Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [evidence IGI]	6030402G23Rik; HRG; Hgl; HRGalpha; GGF; D230005F13Rik; NDF; SMDF; GGFII; ARIA	6030402G23Rik; HRG; Hgl; HRGalpha; GGF; D230005F13Rik; NDF; SMDF; GGFII; ARIA
Mus musculus	RefSeq	ILMN_214911	ILMN_214911	NRG1	NM_178591.2	NM_178591.2		211323	124377985	NM_178591.2	Nrg1	NP_848706.2	ILMN_2971688	002490039	S	2000	TGGCTGAGAGCAGGACTAACCCAGCAGGCCGCTTCTCCACACAGGAAGAA	8	-	32928553-32928602	8qA3	Mus musculus neuregulin 1 (Nrg1), mRNA. XM_900811 XM_900817 XM_900821 XM_900824 XM_900832 XM_900835 XM_912993 XM_922562 XM_922570 XM_922577 XM_922594 XM_922603 XM_922607 XM_922617 XM_922623 XM_922629 XM_922636 XM_986275 XM_986302 XM_986330 XM_986362 XM_986394 XM_986425 XM_986458 XM_986492 XM_986565 XM_986605 XM_986645 XM_986682 XM_986725 XM_988214 XM_990248 XM_990278	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The disaggregation of a protein complex into its constituent components, occurring at the level of an individual cell. Protein complexes may have other associated non-protein prosthetic groups, such as nucleic acids, metal ions or carbohydrate groups [goid 43624] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]	The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence ISO]; Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [evidence IDA]; Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [evidence IGI]	6030402G23Rik; HRG; Hgl; HRGalpha; GGF; D230005F13Rik; NDF; SMDF; GGFII; ARIA	6030402G23Rik; HRG; Hgl; HRGalpha; GGF; D230005F13Rik; NDF; SMDF; GGFII; ARIA
Mus musculus	RefSeq	ILMN_224148	ILMN_261983	ALDH1A1	NM_013467.3	NM_013467.3		11668	118129922	NM_013467.3	Aldh1a1	NP_038495.2	ILMN_1222734	005810470	S	1744	GAATAGAAGGATAGATATAAGCGCAAGCTCTCTGTAACTCCGTCATGACC	19	+	20717664-20717713	19qB	Mus musculus aldehyde dehydrogenase family 1, subfamily A1 (Aldh1a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The invagination of the optic vesicle to form two-walled indentations, the optic cups, that will go on to form the retina. This process begins with the optic vesicle becoming a two-walled structure and its subsequent shape changes. It does not include the fate commitment of cells to become the pigmented retina and the neural retina [goid 2072] [evidence IGI]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IMP]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IMP]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IGI]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal [goid 1758] [evidence IEA]; Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [evidence IDA]	Raldh1; E1; Ahd2; Aldh1a2; Ahd-2; Aldh1	Raldh1; E1; Ahd2; Aldh1a2; Ahd-2; Aldh1
Mus musculus	RefSeq	ILMN_212375	ILMN_212375	FAM171A2	NM_199200.2	NM_199200.2		217219	110347501	NM_199200.2	Fam171a2	NP_954670.2	ILMN_2704134	001110414	S	3011	GGGCTGGTGGCTGGGGCGATCCTGGAGACTAGAGGATAATGTGATAACAC	11	-	102298333-102298382	11qD	Mus musculus family with sequence similarity 171, member A2 (Fam171a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-226P4.5	RP23-226P4.5
Mus musculus	RefSeq	ILMN_248458	ILMN_248458	FAM162A	NM_027342.1	NM_027342.1		70186	21312545	NM_027342.1	Fam162a	NP_081618.1	ILMN_2987107	001300411	S	294	TGCTGCGAAGAACAAGCTCCGGGTGAAGGTCAGCTATCTAATGATTGCCC	16	-	36046508-36046557	16qB3	Mus musculus family with sequence similarity 162, member A (Fam162a), mRNA.					
Mus musculus	Riken	ILMN_203330	ILMN_203330	9030003C19RIK	ri|9030003C19|PX00104J15|AK033415|2235					AK033415	9030003C19Rik		ILMN_2556478	000510743	S	2045	CCATGGCTTTGAACGTGGGCTGCTGGGGAAGTGTCTTGTCAAGGTGTGCT										
Mus musculus	MEEBO	ILMN_216271	ILMN_216271	DBH	scl21140.12.1_50	NM_138942.2			24475822	NM_138942.2	Dbh		ILMN_2669234	002470719	S	2220	CTGTGTAGCCCTCCCTTCCTGTGTGAAGACTCACTTCCATAGACTAGTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process involved in the carrying out of an immune response by a leukocyte [goid 2443] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; Any homoeostatic process by which an organism maintains its internal body temperature at a relatively constant value. This is achieved by using metabolic processes to counteract fluctuations in the temperature of the environment [goid 42309] [evidence IMP]; The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42421] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42420] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 42423] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of vasoconstriction [goid 45907] [evidence IMP]; The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; Female behaviors associated with the care and rearing of offspring [goid 42711] [evidence IMP]; A change in the behavior of an organism as a result of an ethanol stimulus [goid 48149] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3,4-dihydroxyphenethylamine + ascorbate + O2 = noradrenaline + dehydroascorbate + H2O [goid 4500] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211517	ILMN_211517	SON	NM_178880.4	NM_178880.4		20658	124358954	NM_178880.4	Son	NP_849211.3	ILMN_2670835	003290132	S	8240	CAGCTACACCTAGATAGACGTAAATAAAAATGCTGTAACCGACTTATCTA	16	+	91679226-91679275	16qC3.3	Mus musculus Son DNA binding protein (Son), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA409051; 2900011L12Rik; C81487; mKIAA1019	AA409051; 2900011L12Rik; C81487; mKIAA1019
Mus musculus	RefSeq	ILMN_196882	ILMN_311287	LOC620009	XR_030609.1	XR_030609.1		620009	149233641	XR_030609.1	LOC620009		ILMN_1230951	005810167	S	845	TGCACATTGAAGCCATAGAAGCCAGTGTGATGAAGACATACCATCTCGTG				1qA1	PREDICTED: Mus musculus similar to pyruvate dehydrogenase (lipoamide) beta (LOC620009), misc RNA.					
Mus musculus	RefSeq	ILMN_213240	ILMN_311287	LOC620009	XR_030609.1	XR_030609.1		620009	149233641	XR_030609.1	LOC620009		ILMN_2635082	001300255	S	1381	CTAAGAAGTATATTATCTACATTTGCTGTTTAATTGTTTTGATAAGGAAT				1qA1	PREDICTED: Mus musculus similar to pyruvate dehydrogenase (lipoamide) beta (LOC620009), misc RNA.					
Mus musculus	RefSeq	ILMN_218242	ILMN_218242	TSR2	NM_175146.3	NM_175146.3		69499	142352950	NM_175146.3	Tsr2	NP_780355.1	ILMN_2763198	006760097	S	3061	GCAAGGCTTGGCTGCTGCTGACTCTTAACAACAAGTATAAGGGGTGTGCA	X	-	147522297-147522346	XqF3	Mus musculus TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) (Tsr2), mRNA.		Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		2310007F12Rik	2310007F12Rik
Mus musculus	Riken	ILMN_202865	ILMN_202865	ADD2	ri|4432405I01|PX00011C03|AK028425|3247					AK028425	Add2		ILMN_2552900	000540576	S	2937	GCAGAACGAGTAGATGAAGATCCTCGATGCAGGTCTGGCCTCTGGGTCAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_251899	ILMN_251899	OLFR1461	NM_146302.1	NM_146302.1		258299	49170041	NM_146302.1	Olfr1461	NP_666414.1	ILMN_2964937	004390450	S	689	GCTCAAGAGCAGGAGTTCAGAAGGCTCTTTCCACCTGTGTCTCCCACTTA	19	+	13240194-13240243	19qA	Mus musculus olfactory receptor 1461 (Olfr1461), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR202-35	MOR202-35
Mus musculus	RefSeq	ILMN_196770	ILMN_196770	KLK1B24	NM_010643.1	NM_010643.1		16617	8393674	NM_010643.1	Klk1b24	NP_034773.1	ILMN_1256024	004810296	S	687	ACGGTATCACATCATGGGGTCCTGTCCCATGTGGTAAACCCAATGCGCCG	7	+	51447661-51447710	7qB4	Mus musculus kallikrein 1-related peptidase b24 (Klk1b24), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence NAS]	mGk-24; Klk24	mGk-24; Klk24
Mus musculus	RefSeq	ILMN_196770	ILMN_196770	KLK1B24	NM_010643.1	NM_010643.1		16617	8393674	NM_010643.1	Klk1b24	NP_034773.1	ILMN_2622463	006420180	S	531	AGTGTGTGTTCATCAAGCTCCTGCCCAATGAGAACTGTACCAAACCCTAC	7	+	51447135-51447184	7qB4	Mus musculus kallikrein 1-related peptidase b24 (Klk1b24), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence NAS]	mGk-24; Klk24	mGk-24; Klk24
Mus musculus	MEEBO	ILMN_210551	ILMN_210551	FBXO12	scl0050757.1_3	XM_356187.1			38090094	XM_356187.1	Fbxo12		ILMN_1226750	003450685	S	316	CCTATGGAGTTTGAATTTCGGGCACATCCATGGTATATCTCAAGGCATGG										
Mus musculus	RefSeq	ILMN_220803	ILMN_220803	DHX35	NM_145742.1	NM_145742.1		71715	21919419	NM_145742.1	Dhx35	NP_665685.1	ILMN_2861225	005550750	S	2808	CGACCCATGGGGCTTCTCTTTAGCAGGAACTCACTACAGTTTAGACGCCC	2	+	158683559-158683608	2qH1	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 35 (Dhx35), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Ddx35; 1200009D07Rik	Ddx35; 1200009D07Rik
Mus musculus	RefSeq	ILMN_199393	ILMN_199393	OLFR1250	NM_146965.1	NM_146965.1		258967	22128996	NM_146965.1	Olfr1250	NP_667176.1	ILMN_1255403	000020372	S	633	CCTCCTTGTCTCCTATGGAATCATTCTAAACTCTCTTAAGACTCACAGTC	2	-	89496914-89496963	2qE1	Mus musculus olfactory receptor 1250 (Olfr1250), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR231-7	MOR231-7
Mus musculus	RefSeq	ILMN_188920	ILMN_248450	ADCYAP1R1	NM_007407.3	NM_007407.3		11517	70780367	NM_007407.3	Adcyap1r1	NP_031433.3	ILMN_2717038	002140347	S	1542	GCCACAGCGGGCTCAGCAGCACTCTTGCAAGATGTCAGAACTATCCACCA	6	+	55441248-55441297	6qB3	Mus musculus adenylate cyclase activating polypeptide 1 receptor 1 (Adcyap1r1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence TAS];  [goid 4999] [evidence TAS]	2900024I10Rik; AI846590; PACAP1-R; PAC1; PAC1R	2900024I10Rik; AI846590; PACAP1-R; PAC1; PAC1R
Mus musculus	RefSeq	ILMN_188920	ILMN_248450	ADCYAP1R1	NM_007407.3	NM_007407.3		11517	70780367	NM_007407.3	Adcyap1r1	NP_031433.3	ILMN_1243799	004610148	S	3344	GGGAGTGTGGGGTGCTGCCTTGCTCGCTGTTATATTAAGTAGAAGGAGTT	6	+	55448550-55448599	6qB3	Mus musculus adenylate cyclase activating polypeptide 1 receptor 1 (Adcyap1r1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence TAS];  [goid 4999] [evidence TAS]	2900024I10Rik; AI846590; PACAP1-R; PAC1; PAC1R	2900024I10Rik; AI846590; PACAP1-R; PAC1; PAC1R
Mus musculus	RefSeq	ILMN_190062	ILMN_190062	TRP53	NM_011640.2	NM_011640.2		22059	148747261	NM_011640.2	Trp53	NP_035770.2	ILMN_2466845	000110279	S	1380	TCCCGGTCCCTTCTGCTGCCTTTTTTACCTTGTAGCTAGGGCTCAGCCCC				11qB3	Mus musculus transformation related protein 53 (Trp53), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of glucose [goid 42149] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell [goid 2347] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IGI]; The expansion of a T cell population by cell division during an immune response [goid 2309] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A cell cycle checkpoint that arrests cell cycle progression G1 phase in response to DNA damage [goid 31571] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IGI]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The process whereby a lymphoid progenitor cell becomes committed to become any type of B cell [goid 2326] [evidence IMP]; The process by which a lymphoid progenitor cell becomes committed to becoming any type of T cell [goid 2360] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 30330] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The formation of a covalent cross-link between RNA and a protein [goid 18144] [evidence IEA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISO]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IGI]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISO]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IGI]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence ISO]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 30330] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	bhy; p53; bbl; bfy	bhy; p53; bbl; bfy
Mus musculus	RefSeq	ILMN_217579	ILMN_217579	BTG3	NM_009770.2	NM_009770.2		12228	118130269	NM_009770.2	Btg3	NP_033900.1	ILMN_3042627	007150433	I	3	CGCGTCGGGACTGCGTTCGCCCTGTCGGCCGCGCGCTCCGCCGCCCGCCA	16	-	78376978-78377027	16qC3.1	Mus musculus B-cell translocation gene 3 (Btg3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ANA; tob5	ANA; tob5
Mus musculus	RefSeq	ILMN_217579	ILMN_217579	BTG3	NM_009770.2	NM_009770.2		12228	118130269	NM_009770.2	Btg3	NP_033900.1	ILMN_3117483	001410470	A	552	GACGAGAACAAGGATGAAATCTCCAAGAAAGTTAGCAGGGCTCTGGATAA	16	-	78365155-78365204	16qC3.1	Mus musculus B-cell translocation gene 3 (Btg3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ANA; tob5	ANA; tob5
Mus musculus	RefSeq	ILMN_196674	ILMN_329481	LOC100039706	XM_001472741.1	XM_001472741.1		100039706	149257248	XM_001472741.1	LOC100039706	XP_001472791.1	ILMN_2525336	002260731	S	46	CCTGCTCTGTGTGCTACTGCTGGATGCTGAGAGGGAAATTCAGGCGAGCT	7	-	50122509-50122558	7qB4	PREDICTED: Mus musculus similar to Predicted gene, EG434179 (LOC100039706), mRNA.					
Mus musculus	RefSeq	ILMN_223407	ILMN_223407	FTO	NM_011936.1	NM_011936.1		26383	6753915	NM_011936.1	Fto	NP_036066.1	ILMN_2763674	007050364	S	3460	CCCATTGGTCTAAGTTCATGGTCTGCTTGTATTGCTGTGCTGTGTGCATT	8	+	94192248-94192297	8qC5	Mus musculus fat mass and obesity associated (Fto), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [pmid 10501967] [evidence IEP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [pmid 10501967] [evidence IEP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1752; AW743446	mKIAA1752; AW743446
Mus musculus	RefSeq	ILMN_258324	ILMN_258324	KRT36	NM_008472.1	NM_008472.1		16673	110625598	NM_008472.1	Krt36	NP_032498.1	ILMN_2985042	002360537	S	3311	TGCACCCCAGCTCCTCAAGTCAGCACCCAGATCCGGACCATCACCGAGGA				11qD	Mus musculus keratin 36 (Krt36), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			HRa-1; Krt1-5; Krt1-22	HRa-1; Krt1-5; Krt1-22
Mus musculus	RefSeq	ILMN_240892	ILMN_240892	CNTNAP5C	NM_001081653.1	NM_001081653.1		620292	126116575	NM_001081653.1	Cntnap5c	NP_001075122.1	ILMN_2849215	005050736	S	3285	GGCCAATAGAAGAGTGCACCAGGTGAAAATGAGCCGTGATGGTCCAGAAC	17	+	58498684-58498733	17qD	Mus musculus contactin associated protein-like 5C (Cntnap5c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EG620292; Caspr5-3	EG620292; Caspr5-3
Mus musculus	RefSeq	ILMN_240892	ILMN_240892	CNTNAP5C	NM_001081653.1	NM_001081653.1		620292	126116575	NM_001081653.1	Cntnap5c	NP_001075122.1	ILMN_2849210	003840437	S	3385	TCTGAGTTCCAGAGAGCAAGGTCGCTCGTCCTAGGCAAAGTCACAGAGAC	17	+	58503626-58503671:58534540-58534543	17qD	Mus musculus contactin associated protein-like 5C (Cntnap5c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EG620292; Caspr5-3	EG620292; Caspr5-3
Mus musculus	RefSeq	ILMN_208833	ILMN_208833	GINS3	NM_030198.3	NM_030198.3		78833	146149120	NM_030198.3	Gins3	NP_084474.1	ILMN_2589960	000050446	S	2088	CCCTGACCACTTACTGGGAGTCTCTTTAAACATGCACCAAACTGAGAGGG				8qD1	Mus musculus GINS complex subunit 3 (Psf3 homolog) (Gins3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]		2700085M18Rik; AI616142	2700085M18Rik; AI616142
Mus musculus	RefSeq	ILMN_215457	ILMN_215457	TMEM126A	NM_025460.1	NM_025460.1		66271	13384869	NM_025460.1	Tmem126a	NP_079736.1	ILMN_2803627	002650615	S	488	GGTGGTCTGTACCCTATCCTTTTGGCTATACCCGTCAATGGGGGCCTTGC	7	-	90326739-90326788	7qE1	Mus musculus transmembrane protein 126A (Tmem126a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1810020E01Rik	1810020E01Rik
Mus musculus	RefSeq	ILMN_210871	ILMN_210871	PLEKHG2	NM_138752.1	NM_138752.1		101497	20270286	NM_138752.1	Plekhg2	NP_620091.1	ILMN_2987027	004060239	S	5336	GCCTGGACATTAGGCTTCCTAAGCTTCAAGAACTTTCTTCACCAGGTGCC	7	-	28068490-28068539	7qA3	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 2 (Plekhg2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	AI194308; Clg; Cslg	AI194308; Clg; Cslg
Mus musculus	RefSeq	ILMN_214231	ILMN_313088	LOC100048638	XR_034832.1	XR_034832.1		100048638	149249681	XR_034832.1	LOC100048638		ILMN_1249743	003830475	S	2378	TCCAATCAGGGTGGACCAGTGGGGCCTGCGAGTAAGAGCAGTAGCCTGCT					PREDICTED: Mus musculus similar to lens fiber cell beaded-filament structure protein (LOC100048638), misc RNA.					
Mus musculus	RefSeq	ILMN_209177	ILMN_209177	CDO1	NM_033037.3	NM_033037.3		12583	118130772	NM_033037.3	Cdo1	NP_149026.1	ILMN_2975345	001410296	S	1346	TGCTGTGGAGACTAGGGACGCATAGAGCAGTTTGGTGCTTGGTAGTGACC	18	-	46872993-46873042	18qC	Mus musculus cysteine dioxygenase 1, cytosolic (Cdo1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving L-cysteine, the levorotatory isomer of 2-amino-3-mercaptopropanoic acid [goid 46439] [evidence IEA]; The chemical reactions and pathways involving taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats [goid 19530] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including taurine [goid 19452] [evidence TAS]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-cysteine + O2 = 3-sulfinoalanine [goid 17172] [evidence TAS]	D18Ucla3; Cdo; 1300002L19Rik	D18Ucla3; Cdo; 1300002L19Rik
Mus musculus	RefSeq	ILMN_223675	ILMN_223675	OTTMUSG00000008540	NM_177865.2	NM_177865.2		329919	31342812	NM_177865.2	OTTMUSG00000008540	NP_808533.1	ILMN_2793138	002690692	S	1026	GGATCACACATATTTCCCAGGACTCATGGACTAAGACATCACTAAGTGCT	4	+	112145120-112145169	4qD1	Mus musculus predicted gene, OTTMUSG00000008540 (OTTMUSG00000008540), mRNA.				A430070M19	A430070M19
Mus musculus	RefSeq	ILMN_185386	ILMN_226796	1700066B19RIK	NM_001033168.2	NM_001033168.2		73449	142388187	NM_001033168.2	1700066B19Rik	NP_001028340.1	ILMN_2426612	002030463	S	737	TGCACCTCTGATCTCCATCTCCCTTGAAGTAAAGTGAAGATTCCATCCCT	18	+	35888756-35888805	18qB2	Mus musculus RIKEN cDNA 1700066B19 gene (1700066B19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212976	ILMN_259673	BFAR	NM_025976.3	NM_025976.3		67118	146135049	NM_025976.3	Bfar	NP_080252.1	ILMN_2687865	002650021	S	451	GCCATTAGAATGCGAGTTGAAGACATTCAGCAGAATAATGATGTAGTCCA					Mus musculus bifunctional apoptosis regulator (Bfar), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW107665; 3010001A07Rik; BAR; AI666707; RNF47	AW107665; 3010001A07Rik; BAR; AI666707; RNF47
Mus musculus	RefSeq	ILMN_217475	ILMN_259673	BFAR	NM_025976.3	NM_025976.3		67118	146135049	NM_025976.3	Bfar	NP_080252.1	ILMN_2683630	004200753	S	1672	CCAGCTGACTGCTACCCAGGTCAGATTGGACTCATGGTCAATACCCAGCC					Mus musculus bifunctional apoptosis regulator (Bfar), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW107665; 3010001A07Rik; BAR; AI666707; RNF47	AW107665; 3010001A07Rik; BAR; AI666707; RNF47
Mus musculus	Riken	ILMN_204654	ILMN_204654	8030463A06RIK	ri|8030463A06|PX00103L03|AK033210|2619					AK033210	8030463A06Rik		ILMN_1257287	000150253	S	2160	GCAAGCATGGCACTGATGAGAAGTTGAGGCTGAGGCACCCTTTCTGCTTC										
Mus musculus	RefSeq	ILMN_210567	ILMN_210567	FBXW16	NM_177070.3	NM_177070.3		320083	134032047	NM_177070.3	Fbxw16	NP_796044.2	ILMN_2606912	003890156	S	857	TCCAGTGTCTACCAGTCTCAAATTTCCATTATGCCAAGGAGTCTTCTGGA	9	-	109340801-109340850	9qF2	Mus musculus F-box and WD-40 domain protein 16 (Fbxw16), mRNA.				MGC117551; 7420402K12Rik	MGC117551; 7420402K12Rik
Mus musculus	RefSeq	ILMN_197773	ILMN_226566	ENTHD1	XM_986112.1	XM_986112.1		383075	94399123	XM_986112.1	Enthd1	XP_991206.1	ILMN_2529309	002100403	S	678	CGTGGACGAGGCAGCGGACCTCCTACTCCATGTCATTCCCCAGCAGATTA				15qE1	PREDICTED: Mus musculus ENTH domain containing 1 (Enthd1), mRNA.					
Mus musculus	RefSeq	ILMN_261882	ILMN_261882	PMM2	NM_016881.1	NM_016881.1		54128	8393987	NM_016881.1	Pmm2	NP_058577.1	ILMN_2858742	004830255	S	1468	GAAGCCCACTGAAGGGACAGCACCATACCTCACTTCTCAGTCTGGTCACT	16	+	8572511-8572560	16qA1	Mus musculus phosphomannomutase 2 (Pmm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose [goid 19307] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-mannose 1-phosphate = D-mannose 6-phosphate [goid 4615] [evidence IEA]	C86848; AI585868	C86848; AI585868
Mus musculus	Riken	ILMN_204852	ILMN_204852	CRY2	ri|A130049D12|PX00124C08|AK037778|2130					AK037778	Cry2		ILMN_1256483	007160020	S	1577	CAGGACAAGGCACAGGAGAATCACCCTCACGGAGTGGGGCCTGTCATTTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IMP]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IPI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA [goid 3913] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219028	ILMN_219028	OLFR1410	NM_146491.1	NM_146491.1		258484	33239101	NM_146491.1	Olfr1410	NP_666702.1	ILMN_2703311	003190066	S	666	CATCTCTTATGGTTACATCACTGTCACCATCCTCAGAATGCGTTCAGGGT	1	+	94505081-94505130	1qD	Mus musculus olfactory receptor 1410 (Olfr1410), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC129256; MGC129257; MOR208-2	MGC129256; MGC129257; MOR208-2
Mus musculus	RefSeq	ILMN_209705	ILMN_209705	MUM1	NM_023431.5	NM_023431.5		68114	110625677	NM_023431.5	Mum1	NP_075920.4	ILMN_1215647	006110242	S	2300	CCTGTGCGTGGGTTCTACGTCTTCAGCCTAAGTCTGGGAGATCAGATGCC	10	+	79706472-79706521	10qC1	Mus musculus melanoma associated antigen (mutated) 1 (Mum1), mRNA.				9430059D04Rik; 2610019J09; UBE-1C2	9430059D04Rik; 2610019J09; UBE-1C2
Mus musculus	RefSeq	ILMN_200964	ILMN_239165	ITGAD	NM_001029872.1	NM_001029872.1		381924	71274167	NM_001029872.1	Itgad	NP_001025043.1	ILMN_1237406	000650386	S	3467	CCGGCCAGGCAGATTCCAACCATGAGACTCCTCCACATCTCACGTCCTAG	7	+	135348640-135348689	7qF3	Mus musculus integrin, alpha D (Itgad), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cd11d	Cd11d
Mus musculus	RefSeq	ILMN_187641	ILMN_239165	ITGAD	NM_001029872.1	NM_001029872.1		381924	71274167	NM_001029872.1	Itgad	NP_001025043.1	ILMN_2445862	006510349	S	2110	GCCCCAGAGTCTTCCTTCGGGTCAAAGTGCAGTTCTTCGTCTCATCAAAA	7	+	135335713-135335751:135335984-135335994	7qF3	Mus musculus integrin, alpha D (Itgad), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cd11d	Cd11d
Mus musculus	RefSeq	ILMN_239165	ILMN_239165	ITGAD	NM_001029872.1	NM_001029872.1		381924	71274167	NM_001029872.1	Itgad	NP_001025043.1	ILMN_3019915	003780475	I	2672	GGGCCAGCGCAAGCAGTGAGAATAATAAGCCTGAAACCAGCAAGACTGCC	7	+	135341916-135341931:135342040-135342073	7qF3	Mus musculus integrin, alpha D (Itgad), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cd11d	Cd11d
Mus musculus	RefSeq	ILMN_200963	ILMN_239165	ITGAD	NM_001029872.1	NM_001029872.1		381924	71274167	NM_001029872.1	Itgad	NP_001025043.1	ILMN_1222809	002140309	S	957	CCACGTGTTCAAGGTGGGCAATTTTGTAGCACTTCGCAGCATCCAGCGGC	7	+	135329485-135329534	7qF3	Mus musculus integrin, alpha D (Itgad), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cd11d	Cd11d
Mus musculus	RefSeq	ILMN_239165	ILMN_239165	ITGAD	NM_001029872.1	NM_001029872.1		381924	71274167	NM_001029872.1	Itgad	NP_001025043.1	ILMN_3092056	003140095	A	3582	GGCATGGGAACAAGTTCTCTTCAGCTCTGGGCTAGCCTGGGAAACTTCCC	7	+	135348755-135348804	7qF3	Mus musculus integrin, alpha D (Itgad), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cd11d	Cd11d
Mus musculus	Riken	ILMN_205294	ILMN_205294	2610305M23RIK	ri|4833431A09|PX00313J07|AK029403|2028					AK029403	2610305M23Rik		ILMN_1257396	006450626	S	1659	GCGCTGTGCAGCAAACACTCAAGGCAAATTCCTCCTGCTAATTCTGGTAG										
Mus musculus	RefSeq	ILMN_199528	ILMN_199528	LOC382677	XM_356622.1	XM_356622.1			38074000	XM_356622.1	LOC382677		ILMN_1250109	002760184	S	223	CTGGAGACCTACTGGAACCTCACTGTTATAGGACATTGTCAAAGTTCGAG										
Mus musculus	RefSeq	ILMN_196232	ILMN_196232	TNFSF12	NM_011614.1	NM_011614.1		21944	33438583	NM_011614.1	Tnfsf12	NP_035744.1	ILMN_2522794	006520300	S	1154	GTGGATTTTGAAAAGATACTATTTTTATTATTATTGTGACAAAATGTTAA	11	-	69499888-69499937	11qB3	Mus musculus tumor necrosis factor (ligand) superfamily, member 12 (Tnfsf12), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	Tweak; DR3LG; APO3L; DR3L	Tweak; DR3LG; APO3L; DR3L
Mus musculus	RefSeq	ILMN_197056	ILMN_318682	LOC100046513	XR_032976.1	XR_032976.1		100046513	149246601	XR_032976.1	LOC100046513		ILMN_2526748	005420551	S	197	CTCCACTATATGATCCATGAACCAGAACCTCACTGTTCCGGTGGCCACTG					PREDICTED: Mus musculus similar to Cks1 protein homologue (LOC100046513), misc RNA.					
Mus musculus	RefSeq	ILMN_197078	ILMN_313988	EG635956	XM_001473480.1	XM_001473480.1		635956	149247498	XM_001473480.1	EG635956	XP_001473530.1	ILMN_1253052	004390112	S	265	GAAAAGACGGGAAAACGGGAGGTCCCTCTACCCAAAGTTCATGAAAGTTA	1	+	197022796-197022845	1qH6	PREDICTED: Mus musculus predicted gene, EG635956 (EG635956), mRNA.					
Mus musculus	RefSeq	ILMN_199157	ILMN_199157	LOC380716	XM_354631.1	XM_354631.1			38091493	XM_354631.1	LOC380716		ILMN_1228331	004280731	S	94	GGTTATTCGAACGCCGGTCCAGGATGCGGAGCTATTCAGTGTGAGTCGAC										
Mus musculus	Riken	ILMN_203039	ILMN_203039	EPHA7	ri|6720483C07|PX00060F21|AK032973|3189					AK032973	Epha7		ILMN_2554261	006250377	S	2969	CCCGAAAGAGGACAGCAAACAAAAGTGGGCAGCTGGGAAATTGAGCTGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; The process by which the anatomical structures of branches in a nerve are generated and organized. Morphogenesis pertains to the creation of form. This term refers to an anatomical structure (nerve) not a cell (neuron) [goid 48755] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal [goid 45499] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217142	ILMN_231677	SMPD4	NM_029945.2	NM_029945.2		77626	142376053	NM_029945.2	Smpd4	NP_084221.1	ILMN_2726039	000630095	S	415	GTTTATAAACTTCAAGCTGAAGACTATAACTTTGATTTTCCTGTCTCCTG	16	+	17626056-17626105	16qA3	Mus musculus sphingomyelin phosphodiesterase 4 (Smpd4), mRNA.	The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence ISS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IEA]; Catalysis of the reaction: sphingomyelin + H2O = ceramide phosphate + choline [goid 50290] [evidence ISS]	4122402O22Rik; mKIAA1418	4122402O22Rik; mKIAA1418
Mus musculus	RefSeq	ILMN_217142	ILMN_231677	SMPD4	NM_029945.2	NM_029945.2		77626	142376053	NM_029945.2	Smpd4	NP_084221.1	ILMN_1212993	003180678	S	3027	CACCTTCACATCAAAGCTAAGACACCAAAGGGCTCAAGTTCACCCTGCAG	16	+	17643325-17643374	16qA3	Mus musculus sphingomyelin phosphodiesterase 4 (Smpd4), mRNA.	The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence ISS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IEA]; Catalysis of the reaction: sphingomyelin + H2O = ceramide phosphate + choline [goid 50290] [evidence ISS]	4122402O22Rik; mKIAA1418	4122402O22Rik; mKIAA1418
Mus musculus	RefSeq	ILMN_213265	ILMN_213265	UBOX5	NM_080562.4	NM_080562.4		140629	146149225	NM_080562.4	Ubox5	NP_542129.2	ILMN_2635377	002510131	S	3428	CCAGGGTGGGGGGAACCACACCCACACCGTAAATGTGATTAAGTTTTCCC				2qF1	Mus musculus U box domain containing 5 (Ubox5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ube7ip5; 1500010O06Rik; C330018L13Rik; Rnf37; Ubce7ip5; UIP5	Ube7ip5; 1500010O06Rik; C330018L13Rik; Rnf37; Ubce7ip5; UIP5
Mus musculus	RefSeq	ILMN_213265	ILMN_213265	UBOX5	NM_080562.4	NM_080562.4		140629	146149225	NM_080562.4	Ubox5	NP_542129.2	ILMN_2733026	004540241	S	2285	CATGAGTTAGCCATGTGTACCCCCACCTCTGCAGACACTTGCAGCCTTAA				2qF1	Mus musculus U box domain containing 5 (Ubox5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ube7ip5; 1500010O06Rik; C330018L13Rik; Rnf37; Ubce7ip5; UIP5	Ube7ip5; 1500010O06Rik; C330018L13Rik; Rnf37; Ubce7ip5; UIP5
Mus musculus	Riken	ILMN_203824	ILMN_203824	SNTG1	ri|A230066K05|PX00128P08|AK038832|2945					AK038832	Sntg1		ILMN_1223931	000070411	S	2511	GCTTTGCTGATAGACTTCCCCTGCAAAGTTATGATGGTGGTGAACAGTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198661	ILMN_246548	EG624153	XM_910275.1	XM_910275.1		624153	83003321	XM_910275.1	EG624153	XP_915368.1	ILMN_1227734	000830274	S	14	CGGAGAACTGTCTTCAAAGGTCTTCAGGTCACCGCCAACATCACTCCCGC				XqE1	PREDICTED: Mus musculus predicted gene, EG624153 (EG624153), mRNA.					
Mus musculus	RefSeq	ILMN_210317	ILMN_210317	CYP7A1	NM_007824.2	NM_007824.2		13122	31542444	NM_007824.2	Cyp7a1	NP_031850.2	ILMN_2604383	004880333	S	3499	TACAGAATGATGGGTCTCCTGGTGGTGCCTTCTTCTCATATTTTTATTCT	4	-	6193382-6193431	4qA1	Mus musculus cytochrome P450, family 7, subfamily a, polypeptide 1 (Cyp7a1), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: cholesterol + NADPH + H+ + O2 = 7-alpha-hydroxycholesterol + NADP+ + H2O [goid 8123] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: cholesterol + NADPH + H+ + O2 = 7-alpha-hydroxycholesterol + NADP+ + H2O [goid 8123] [evidence IDA]		
Mus musculus	RefSeq	ILMN_198897	ILMN_198897	LOC244660	XM_146528.2	XM_146528.2			38089503	XM_146528.2	LOC244660		ILMN_1241064	001300019	S	486	TGCAGTTGTGTGGCATCCACATCGCATAACCCAACAAAAACGTGACAAGG										
Mus musculus	RefSeq	ILMN_225832	ILMN_225832	1810015A11RIK	NM_026940.1	NM_026940.1		69101	63003922	NM_026940.1	1810015A11Rik	NP_081216.1	ILMN_2883952	000510338	S	1099	TTCCAGGTCCTCTAGGCTGAGTAGTGAGTAGTAGGCCGACCTTGGGCAGC	16	+	17062211-17062260	16qA3	Mus musculus RIKEN cDNA 1810015A11 gene (1810015A11Rik), mRNA.				4930521M19Rik; MGC144470	4930521M19Rik; MGC144470
Mus musculus	RefSeq	ILMN_235792	ILMN_235792	TRIM40	NM_001033235.1	NM_001033235.1		195359	84794618	NM_001033235.1	Trim40	NP_001028407.1	ILMN_2862338	004590100	S	1663	CCACAGTCCTCACCCTCATGTTCAGGTACTTGTAACTTTGTCCTCTGGAG	17	-	36490055-36490104	17qB1	Mus musculus tripartite motif-containing 40 (Trim40), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm35; Gm865; Gm319	Gm35; Gm865; Gm319
Mus musculus	RefSeq	ILMN_222984	ILMN_222984	LENG9	NM_175529.3	NM_175529.3		243813	142388035	NM_175529.3	Leng9	NP_780738.1	ILMN_2757682	004210300	S	1589	CTGGCTTTGCCGCATGGGTAGAGCAGGGCATAGCTATCTTCCCTTGGTAG	7	-	4099836-4099885	7qA1	Mus musculus leukocyte receptor cluster (LRC) member 9 (Leng9), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	F630035L11Rik; 9530024C23Rik	F630035L11Rik; 9530024C23Rik
Mus musculus	RefSeq	ILMN_213294	ILMN_213294	UBE2K	NM_016786.3	NM_016786.3		53323	118601007	NM_016786.3	Ube2k	NP_058066.2	ILMN_2655066	003830619	S	325	GAATTTTACAGAATTAAGAGGAGAAATAGCAGGACCTCCAGACACACCGT	5	+	65957266-65957315	5qC3.1	Mus musculus ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) (Ube2k), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	AW492011; D5Ertd601e	AW492011; D5Ertd601e
Mus musculus	RefSeq	ILMN_213294	ILMN_213294	UBE2K	NM_016786.3	NM_016786.3		53323	118601007	NM_016786.3	Ube2k	NP_058066.2	ILMN_2640742	002570747	S	461	TGGCACCCTAATATTAGTTCCGTCACAGGGGCTATTTGTTTGGATATCCT	5	+	65972646-65972695	5qC3.1	Mus musculus ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) (Ube2k), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	AW492011; D5Ertd601e	AW492011; D5Ertd601e
Mus musculus	RefSeq	ILMN_214230	ILMN_214230	KIF5A	NM_008447.3	NM_008447.3		16572	118130812	NM_008447.3	Kif5a	NP_032473.2	ILMN_2645752	002190553	S	3243	TCCACCAAGAGACAGCAGCCAGCTAACTCCCAACCCTGGCCACATATCTG	10	-	126666809-126666833:126666834-126666858	10qD3	Mus musculus kinesin family member 5A (Kif5a), transcript variant 1, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence TAS]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence TAS]	Kns; D10Bwg0738e; mKIAA4086; KIAA4086; Kif5	Kns; D10Bwg0738e; mKIAA4086; KIAA4086; Kif5
Mus musculus	MEEBO	ILMN_189962	ILMN_189962	6330419J24RIK	scl54924.2_558				33942107	NM_183030	6330419J24Rik		ILMN_2702785	007050661	S	2297	CAGAGATGTGGTTTTTGAAGTTGTCACATGTTGTCTCCCAAAGGTAAAAG										
Mus musculus	MEEBO	ILMN_189962	ILMN_189962	6330419J24RIK	scl54924.2_558				33942107	NM_183030	6330419J24Rik		ILMN_2465978	006620592	S	4	AGGTTCAGGTGAGAGGGTAGTTGGCAAGCAATCAAAAAACTCGATGAGAT										
Mus musculus	RefSeq	ILMN_220283	ILMN_220283	CRYBB3	NM_021352.2	NM_021352.2		12962	42476046	NM_021352.2	Crybb3	NP_067327.1	ILMN_2720107	006980377	S	601	AGTTCCCGGGCTACCGTGGGCGCCAGTACGTGTTCGAGCGGGGCGAATTC	5	-	113505007-113505056	5qF	Mus musculus crystallin, beta B3 (Crybb3), mRNA.			The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]	AI852419	AI852419
Mus musculus	RefSeq	ILMN_219704	ILMN_219704	FAR1	NM_027379.2	NM_027379.2		67420	68448550	NM_027379.2	Far1	NP_081655.2	ILMN_3135107	006480669	A	1474	GAAGAGATGTCTGGCCTCCCTGCTGCTCGGAAGCATCTCAACAAGTTGCG	7	+	120709983-120710026:120711609-120711614	7qF1	Mus musculus fatty acyl CoA reductase 1 (Far1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of wax, which includes C16 and C18 fatty acids [goid 10025] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a long-chain aldehyde + CoA + NADP+ = a long-chain acyl-CoA + NADPH [goid 50062] [evidence IDA]	FAR1; 2600011M19Rik; 3732409C05Rik	FAR1; 2600011M19Rik; 3732409C05Rik
Mus musculus	Riken	ILMN_203536	ILMN_203536	E130112L06RIK	ri|E130112L06|PX00091L13|AK053591|4723					AK053591	E130112L06Rik		ILMN_1216599	004210468	S	3725	CCGGGGGAGCTCAAGGAAGAGAAGCAAGTGTGCTGTTAAAGTCTTCCCAG										
Mus musculus	MEEBO	ILMN_194479	ILMN_194479	IGHV5S1_X01113$K02890_IG_HEAVY_VARIABLE_5S1_94	IGHV5S1_X01113$K02890_Ig_heavy_variable_5S1_94						IGHV5S1_X01113$K02890_Ig_heavy_variable_5S1_94		ILMN_1219018	005290661	S	5	GCCTAGAGAGTCCCTGAAACTCTCCTGTGAATCCAATGAATACGAATTCC										
Mus musculus	RefSeq	ILMN_187705	ILMN_249765	TXLNA	NM_001005506.2	NM_001005506.2		109658	91598585	NM_001005506.2	Txlna	NP_001005506.2	ILMN_1218078	002450470	S	4464	ATGTGTGGACCACCAGGCATCTGACTGCCCTTGACCAGCCTCGGGTAGGA	4	-	129305380-129305429	4qD2.2	Mus musculus taxilin alpha (Txlna), mRNA.		A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]		Txln; AW209241; Il14; MGC77972; AI425952; MGC86145; 2600010N21Rik	Txln; AW209241; Il14; MGC77972; AI425952; MGC86145; 2600010N21Rik
Mus musculus	MEEBO	ILMN_223268	ILMN_223268	PSEN1	scl0002290.1_15				15928540	BC014744	Psen1		ILMN_2761689	000380673	S	45	TTCGTCGGAAACAAAACAGCGGCAGCTGAGGCGGAAACCTAGGCTGCGAG						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43227] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Any process that modulates the establishment or extent of a resting potential, the electrical charge across the plasma membrane, with the interior of the cell negative with respect to the exterior. The resting potential is the membrane potential of a cell that is not stimulated to be depolarized or hyperpolarized [goid 60075] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IMP]; Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51966] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response [goid 2286] [evidence IGI]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IGI]; The process whereby precursor cell type acquires the specialized features of a hemopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells [goid 2244] [evidence IGI]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage [goid 2573] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence ISO]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [evidence IMP]; The process whereby a neuroblast acquires specialized structural and/or functional features of a Cajal-Retzius cell, one of a transient population of pioneering neurons in the cerebral cortex. These cells are slender bipolar cells of the developing marginal zone. One feature of these cells in mammals is that they express the Reelin gene [goid 21870] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings [goid 51563] [evidence IGI]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IGI]; The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis [goid 35282] [evidence IMP]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IMP]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IGI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein binding [goid 43393] [evidence IGI]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IMP]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IGI]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IGI]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IGI]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IGI]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IGI]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; The process by which synaptic vesicles are directed to specific destination membranes, mediated by molecules at the vesicle membrane and target membrane surfaces [goid 16080] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IMP]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IGI]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IMP]; The directed movement of choline into, out of, within or between cells. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 15871] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IGI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IPI]		
Mus musculus	MEEBO	ILMN_192961	ILMN_192961	CSNA	scl27639.28_16				31982443	NM_007784	Csna		ILMN_2492956	005290735	S	20	TAATAACAATACAAAAAGTTACAGATTAATAACAAATTTTCTTTAAGTCA										
Mus musculus	Riken	ILMN_207268	ILMN_207268	G630026M10RIK	ri|G630026M10|PL00013C13|AK090252|2012					AK090252	G630026M10Rik		ILMN_1257356	004250356	S	1890	GTTCTGTCACACAGGAGCCAAAGGCAGAGGGCGGTTTTGAGTTTGAGGCC										
Mus musculus	RefSeq	ILMN_222239	ILMN_222239	FKBP3	NM_013902.2	NM_013902.2		30795	31980718	NM_013902.2	Fkbp3	NP_038930.1	ILMN_2834850	006650471	S	692	GTGGAATTAGTAGACATTGACTGAAACCAGTACTTCCGATCGGACATCAG	12	-	65981242-65981290:65981291-65981291	12qC1	Mus musculus FK506 binding protein 3 (Fkbp3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	FKBP25; 25kDa	FKBP25; 25kDa
Mus musculus	Riken	ILMN_201647	ILMN_201647	1110038G02RIK	ri|1110038G02|R000018A19|AK004156|418					AK004156	1110038G02Rik		ILMN_1233220	004060161	S	115	GGTGGTTTTCACCTGCTTCATCGTCACCACCGGCCTGGTATTAGGATGGT										
Mus musculus	Riken	ILMN_203548	ILMN_203548	9330155C01RIK	ri|9330155C01|PX00105F01|AK034086|4178					AK034086	9330155C01Rik		ILMN_1244531	000650594	S	3951	GATCTATGCCCCCCCCCCCCCCAGAGTTCAGTGCCACAGATGTAAAGCAT										
Mus musculus	RefSeq	ILMN_208798	ILMN_208798	SMEK1	NM_211355.1	NM_211355.1		68734	46849744	NM_211355.1	Smek1	NP_997594.1	ILMN_2589639	005130543	S	4035	TTCGGAAATTTCATATCTTGGAGAAATGACGGTACATTAAATCAAAATTG	12	-	102277787-102277836	12qE	Mus musculus SMEK homolog 1, suppressor of mek1 (Dictyostelium) (Smek1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110034C04Rik; BC064465; mKIAA2010	1110034C04Rik; BC064465; mKIAA2010
Mus musculus	RefSeq	ILMN_208798	ILMN_208798	SMEK1	NM_211355.1	NM_211355.1		68734	46849744	NM_211355.1	Smek1	NP_997594.1	ILMN_3000456	001470242	S	3762	CGTGCTGGCACCTGCTTTACATGTGTAATTTGTGTTCTACATCACAGTTC	12	-	102278060-102278109	12qE	Mus musculus SMEK homolog 1, suppressor of mek1 (Dictyostelium) (Smek1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110034C04Rik; BC064465; mKIAA2010	1110034C04Rik; BC064465; mKIAA2010
Mus musculus	RefSeq	ILMN_208798	ILMN_208798	SMEK1	NM_211355.1	NM_211355.1		68734	46849744	NM_211355.1	Smek1	NP_997594.1	ILMN_3000465	007380768	S	3935	GCATCAGCAGCTGTCTTGAGATTTCAGGGAAATAGAGTGGAATTTAAAAC	12	-	102277887-102277936	12qE	Mus musculus SMEK homolog 1, suppressor of mek1 (Dictyostelium) (Smek1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110034C04Rik; BC064465; mKIAA2010	1110034C04Rik; BC064465; mKIAA2010
Mus musculus	RefSeq	ILMN_229058	ILMN_229058	BUD31	NM_001008705.1	NM_001008705.1		231889	57222237	NM_001008705.1	Bud31	NP_001008705.1	ILMN_2781966	004880044	S	201	GGAAATGCCCAAGGTCAAAAGAAGCCGGAAAGCACCTCCAGATGGCTGGG	5	+	145903339-145903342:145903343-145903388	5qG2	Mus musculus BUD31 homolog (yeast) (Bud31), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	EDG-2; C77604; EDG2; G10	EDG-2; C77604; EDG2; G10
Mus musculus	Riken	ILMN_202372	ILMN_202372	5430404L10RIK	ri|4930522A05|PX00033K14|AK015866|1052					AK015866	5430404L10Rik		ILMN_1248473	006280747	S	607	GCATTTGCAGCAAGAATGCCATGCTCTGACTGACCCAGGCTGTGCATCTC										
Mus musculus	MEEBO	ILMN_184356	ILMN_184356	BC026996	scl22952.21.1_59				41351530	NM_201407	BC026996		ILMN_2655025	004070577	S	4204	CCATCGACTGCCGAAAGTGTTTTGGAGCACCTCTGGAATGCTAGGGACCC										
Mus musculus	RefSeq	ILMN_185457	ILMN_231192	BC018473	NR_003364.1	NR_003364.1		193217	126090534	NR_003364.1	BC018473		ILMN_1245566	000940470	S	2752	TTGGTCCTCTCCCTGCAACACCCTGCCCCCTTACCCAACAGGCTGAAATG	11	+	116618686-116618735	11qE2	Mus musculus cDNA sequence BC018473 (BC018473), non-coding RNA.					
Mus musculus	RefSeq	ILMN_199295	ILMN_199295	LOC195531	XM_112237.3	XM_112237.3			38093968	XM_112237.3	LOC195531		ILMN_1230305	002940048	S	149	AAGGAGAGAACCCTTACAAATGCGAATGCAATCTGAGAAGGCATCAGAAA										
Mus musculus	Riken	ILMN_205721	ILMN_205721	9630027M13RIK	ri|9630027M13|PX00115D10|AK036022|4074					AK036022	9630027M13Rik		ILMN_1252189	002360373	S	3737	GTTGCAGCGAATGGACAACGGGCATGGTAGAAGTCGCTCTCAGGGGAGTG										
Mus musculus	MEEBO	ILMN_195185	ILMN_195185	ANKHD1	scl00108857.1_273						Ankhd1		ILMN_1239042	003310619	S	7	CCCATAGAGCCTCCGAGTGCAACCACCACTACTACAATTGGAATCTCTGC								Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218903	ILMN_218903	N6AMT2	NM_026526.2	NM_026526.2		68043	141802144	NM_026526.2	N6amt2	NP_080802.1	ILMN_1235697	002750521	S	746	TCTGTGGAAACATTGTGACCTCCCCCTTTCTCTGCCCTGGCTGGGACTCC	14	-	58168475-58168524	14qC3	Mus musculus N-6 adenine-specific DNA methyltransferase 2 (putative) (N6amt2), mRNA.		The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Ayu21-96; Gt(pU21)96Imeg; 2510005D08Rik; AW045965; GtAyu21-96	Ayu21-96; Gt(pU21)96Imeg; 2510005D08Rik; AW045965; GtAyu21-96
Mus musculus	RefSeq	ILMN_249620	ILMN_249620	POU3F4	NM_008901.1	NM_008901.1		18994	6679426	NM_008901.1	Pou3f4	NP_032927.1	ILMN_3162068	006900035	S	530	CGCACCACTGCCAGGACCACTCTGATGAAGAGACTCCAACCTCTGATGAG	X	+	108010333-108010382	XqE1	Mus musculus POU domain, class 3, transcription factor 4 (Pou3f4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain [goid 21879] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Otf9; Brn4; Slf; Brn-4; RP23-57B14.1	Otf9; Brn4; Slf; Brn-4; RP23-57B14.1
Mus musculus	RefSeq	ILMN_188730	ILMN_188730	ZFP281	NM_177643.2	NM_177643.2		226442	31342228	NM_177643.2	Zfp281	NP_808311.1	ILMN_2477243	004850068	S	9	GGGTACAGAGACAAGTGTGATCAAAGATGGAGAGGACCTTTACCCCTGTA	1	+	138441364-138441413	1qE4	Mus musculus zinc finger protein 281 (Zfp281), mRNA.				MGC7737; MGC70044	MGC7737; MGC70044
Mus musculus	RefSeq	ILMN_198818	ILMN_309877	LOC665143	XR_030951.1	XR_030951.1		665143	149258255	XR_030951.1	LOC665143		ILMN_1234050	006480180	S	561	TGCCACCAGGAGCAGGAGATGTGCAGTTGTCAGTTTCACAGAATATCCCC	7	-	148178838-148178887	7qF5	PREDICTED: Mus musculus similar to Nucleotide binding protein-like (LOC665143), misc RNA.					
Mus musculus	RefSeq	ILMN_196731	ILMN_196731	HIST1H2AO	NM_178185.1	NM_178185.1		319171	30061374	NM_178185.1	Hist1h2ao	NP_835492.1	ILMN_2836654	006510253	S	342	CGTGCTGCTGCCCAAGAAGACCGAGAGCCACCACAAGGCCAAGGGAAAAT	13	-	21924953-21925002	13qA3.1	Mus musculus histone cluster 1, H2ao (Hist1h2ao), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189295	ILMN_238449	OLFR100	NM_207673.1	NM_207673.1		404307	46575913	NM_207673.1	Olfr100	NP_997556.1	ILMN_1228606	003120279	S	779	GTCCCACCTCGGGGAGCTCTCTGGATCAGGACAGAATCATTGCCATCATG	17	-	37489878-37489927		Mus musculus olfactory receptor 100 (Olfr100), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_200448	ILMN_256082	LOC665290	XM_977121.2	XM_977121.2		665290	149275254	XM_977121.2	LOC665290	XP_982215.1	ILMN_1235211	002810133	S	1373	CAGCCAACTGGAGCAAGATGAATGTGGAACAATACCCTGTCCCTCTGGAG	Un|NT_166438.1	-	83175-83224		PREDICTED: Mus musculus similar to D5Ertd577e protein, transcript variant 4 (LOC665290), mRNA.					
Mus musculus	RefSeq	ILMN_200449	ILMN_256082	LOC665290	XM_977121.2	XM_977121.2		665290	149275254	XM_977121.2	LOC665290	XP_982215.1	ILMN_1234000	000730209	S	2350	GCCACATGTCCCTAGAGCCCTATTCCTATGGAGTCCCAAACTCTATGAAG	Un|NT_166438.1	-	82198-82247		PREDICTED: Mus musculus similar to D5Ertd577e protein, transcript variant 4 (LOC665290), mRNA.					
Mus musculus	RefSeq	ILMN_209018	ILMN_318712	LOC100048313	XM_001480281.1	XM_001480281.1		100048313	149259379	XM_001480281.1	LOC100048313	XP_001480331.1	ILMN_2591782	001010324	S	3999	GCTGAGAGGTAGTTAAATGGACACACCTGCCGTGCCTCTTGATGAGAAGC					PREDICTED: Mus musculus similar to ABC transporter, transcript variant 1 (LOC100048313), mRNA.					
Mus musculus	RefSeq	ILMN_192270	ILMN_314164	LOC100047052	XM_001477288.1	XM_001477288.1		100047052	149252236	XM_001477288.1	LOC100047052	XP_001477338.1	ILMN_2486539	000430347	S	1564	CCAGGCTGAGTGTCTAGTTGAAAATATGTGGCAGTCATCTACACAGAGAG					PREDICTED: Mus musculus similar to Aptx protein (LOC100047052), mRNA.					
Mus musculus	RefSeq	ILMN_192270	ILMN_314164	LOC100047052	XM_001477288.1	XM_001477288.1		100047052	149252236	XM_001477288.1	LOC100047052	XP_001477338.1	ILMN_2675681	003290332	S	454	AGAAAGAGGTCAGACTGTGATAGTGAGGAGATGGAAGCTGAGTCTGGGAC					PREDICTED: Mus musculus similar to Aptx protein (LOC100047052), mRNA.					
Mus musculus	RefSeq	ILMN_192270	ILMN_314164	LOC100047052	XM_001477288.1	XM_001477288.1		100047052	149252236	XM_001477288.1	LOC100047052	XP_001477338.1	ILMN_2619307	005550348	S	1370	GGCAAAGCCGGCTTGAGACTCAAATGCACGATGTAGAAGCAGAGGATTGG					PREDICTED: Mus musculus similar to Aptx protein (LOC100047052), mRNA.					
Mus musculus	Riken	ILMN_204675	ILMN_204675	A230029D22RIK	ri|A230029D22|PX00127F10|AK038537|2439					AK038537	A230029D22Rik		ILMN_1256185	006380541	S	1932	CTGACTTGAACCAGCCAGCCAGAGTTCAGAAAGAACAAGAAGGGCTGAGC										
Mus musculus	RefSeq	ILMN_223335	ILMN_223335	CD1D2	NM_007640.2	NM_007640.2		12480	110665732	NM_007640.2	Cd1d2	NP_031666.2	ILMN_1257334	007560754	S	1181	GAGCAACCAGTATGCTCCTTTAAATTTAGGAATATTACTTCCTAATTAAA	3	+	86793391-86793440	3qF1	Mus musculus CD1d2 antigen (Cd1d2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-4 [goid 45404] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer T cell activation [goid 51135] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]		CD1.2; Cd1b; Ly-38	CD1.2; Cd1b; Ly-38
Mus musculus	MEEBO	ILMN_223726	ILMN_223726	COX7A2L	scl020463.2_41	XM_123188.1			20901262	XM_123188.1	Cox7a2l		ILMN_1242107	005960327	S	696	GCGAAGCGCGGAAGCCTTTTGGAGTGTAGGTGTGATTGAGGAAGGAAAAC						The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221074	ILMN_221074	TMBIM4	NM_026617.3	NM_026617.3		68212	146141120	NM_026617.3	Tmbim4	NP_080893.1	ILMN_2730714	005810274	S	629	CAGACTCTCTCCCGAAGAGTACGTGATCGCTGCCATCAGTCTCTACATGG				10qD2	Mus musculus transmembrane BAX inhibitor motif containing 4 (Tmbim4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			0610007H07Rik; AU022431	0610007H07Rik; AU022431
Mus musculus	MEEBO	ILMN_186945	ILMN_186945	ZFP262	scl067785.1_22				51709461	XM_355521	Zfp262		ILMN_1232283	002070053	S	1528	GCAGTTGAAGAGCTAGGAGGGTGGCACCTGGGCTTGTAGAGTGACTTAAT										
Mus musculus	MEEBO	ILMN_186945	ILMN_186945	ZFP262	scl067785.1_22				51709461	XM_355521	Zfp262		ILMN_2439840	006840129	S	6	TCCAGACCTTGATTGATCGGAGGGAAAGCAGTTGGCCTGTCTGATAAGTC										
Mus musculus	Riken	ILMN_207051	ILMN_207051	LRP1B	ri|B830020C22|PX00073O18|AK080989|2917					AK080989	Lrp1b		ILMN_1250280	004860471	S	2227	CCACGTGTGGAACCAGGTCTGGGTTCTCCAGATGCTGAGAAGTAGAAGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IDA]		
Mus musculus	Riken	ILMN_202837	ILMN_202837	6720431C02RIK	ri|6720431C02|PX00059C16|AK032766|1442					AK032766	6720431C02Rik		ILMN_1235637	005960110	S	1186	AGCCATTATCCCAAGGACCCCAATGTACAGTCACAACTGCTCACTCTGAC										
Mus musculus	RefSeq	ILMN_198465	ILMN_198465	LOC213411	XM_124808.2	XM_124808.2			38085321	XM_124808.2	LOC213411		ILMN_2531788	004670632	S	38	CATACAAGAACATGCGATTTCTTATTACACACAATCCAACCAATGTGACC										
Mus musculus	RefSeq	ILMN_211870	ILMN_211870	ZFP709	NM_145624.2	NM_145624.2		236193	31559932	NM_145624.2	Zfp709	NP_663599.2	ILMN_2896341	001740010	S	3483	GTGCTACTATTGTGCTAGCATCTCACAGTGAAGTCCAGTTGATTTCTCAG	8	+	74821062-74821111	8qB3.3	Mus musculus zinc finger protein 709 (Zfp709), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC28841; BC021921; HIT-40	MGC28841; BC021921; HIT-40
Mus musculus	RefSeq	ILMN_213329	ILMN_213329	TPRGL	NM_026388.2	NM_026388.2		67808	71795665	NM_026388.2	Tprgl	NP_080664.1	ILMN_1255745	005390382	S	360	GGCTGGTGCTGGTCACCGACCAGTCGCTGCTCATCTGCAAATATGACTTC	4	-	153534291-153534340	4qE2	Mus musculus transformation related protein 63 regulated like (Tprgl), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	RP23-254N4.13	RP23-254N4.13
Mus musculus	RefSeq	ILMN_213329	ILMN_213329	TPRGL	NM_026388.2	NM_026388.2		67808	71795665	NM_026388.2	Tprgl	NP_080664.1	ILMN_2847269	006100685	S	1520	TGAGCACTGCTGAGCTTTGACACGCCAGCCACACACAGCTTGCTGCTGTC	4	-	153531766-153531815	4qE2	Mus musculus transformation related protein 63 regulated like (Tprgl), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	RP23-254N4.13	RP23-254N4.13
Mus musculus	RefSeq	ILMN_198607	ILMN_198607	EG245472	XM_141845.6	XM_141845.6		245472	149271698	XM_141845.6	EG245472	XP_141845.4	ILMN_1252688	005390044	S	664	CATAGTCCATCAAATACATCAGCTTCCCACAGCCAAGGAGGTGTCCCACC	X	+	71812981-71813030	XqA7.3	PREDICTED: Mus musculus predicted gene, EG245472 (EG245472), mRNA.					
Mus musculus	RefSeq	ILMN_201550	ILMN_201550	RPLP1	NM_018853.3	NM_018853.3		56040	118130696	NM_018853.3	Rplp1	NP_061341.1	ILMN_2964873	000540326	S	77	TACAGCATGGCTTCCGTCTCCGAGCTCGCTTGCATCTACTCCGCCCTCAT	9	-	61762191-61762235:61762236-61762240	9qB	Mus musculus ribosomal protein, large, P1 (Rplp1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC103133; Arpp1; C430017H15Rik; 2410042H16Rik	MGC103133; Arpp1; C430017H15Rik; 2410042H16Rik
Mus musculus	RefSeq	ILMN_214690	ILMN_214690	GDI2	NM_008112.4	NM_008112.4		14569	116089272	NM_008112.4	Gdi2	NP_032138.3	ILMN_2650812	000380279	S	311	GGTTCTTCATATGGATCAGAACCCATACTATGGAGGAGAAAGTGCGTCTA	13	+	3548150-3548199	13qA1	Mus musculus guanosine diphosphate (GDP) dissociation inhibitor 2 (Gdi2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IPI]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IPI]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IPI]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]	GDI-B; GDIB; Gdi3	GDI-B; GDIB; Gdi3
Mus musculus	Riken	ILMN_203074	ILMN_203074	E430035L19RIK	ri|E430035L19|PX00101E22|AK089013|1812					AK089013	E430035L19Rik		ILMN_1239306	005290468	S	1531	GTGTAGCCTAGACTGACTGGCCTCCAGCTTAGTGTGTATGTAGCCCAGGC										
Mus musculus	RefSeq	ILMN_223108	ILMN_223108	SPON2	NM_133903.2	NM_133903.2		100689	31981610	NM_133903.2	Spon2	NP_598664.2	ILMN_1229547	007570292	S	1715	GGCCCTTGTGTGTCGTTGATCCCCTTGCATTCGAATAAAGGTCGTGTTCC	5	-	33556584-33556633	5qB1	Mus musculus spondin 2, extracellular matrix protein (Spon2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310045I24Rik; AI504350; Mindin; M-spondin	2310045I24Rik; AI504350; Mindin; M-spondin
Mus musculus	RefSeq	ILMN_218658	ILMN_226898	1700022P22RIK	XM_886605.3	XM_886605.3		75558	149247242	XM_886605.3	1700022P22Rik	XP_891698.1	ILMN_2698647	006330670	S	293	CGAAAGTACCAGGACCTCCTGGGTCAAGCATGATCTCTCTGTGCACAAGG	1	+	192863662-192863711	1qH6	PREDICTED: Mus musculus RIKEN cDNA 1700022P22 gene (1700022P22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217003	ILMN_217003	EVX2	NM_007967.2	NM_007967.2		14029	118131041	NM_007967.2	Evx2	NP_031993.1	ILMN_1217013	003130162	S	1333	TCCGAGAGCGGCTTCTTGCCCTATTCCGCCGCGGTGCTCAGCAAGACCGC	2	-	74493718-74493767	2qC3	Mus musculus even skipped homeotic gene 2 homolog (Evx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Evx-2	Evx-2
Mus musculus	RefSeq	ILMN_217003	ILMN_217003	EVX2	NM_007967.2	NM_007967.2		14029	118131041	NM_007967.2	Evx2	NP_031993.1	ILMN_2677954	002000471	S	1338	GAGCGGCTTCTTGCCCTATTCCGCCGCGGTGCTCAGCAAGACCGCCGTCA	2	-	74493713-74493762	2qC3	Mus musculus even skipped homeotic gene 2 homolog (Evx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Evx-2	Evx-2
Mus musculus	Riken	ILMN_203035	ILMN_203035	6720470G16RIK	ri|6720470G16|PX00060B17|AK032904|3670					AK032904	6720470G16Rik		ILMN_1251512	002760593	S	3508	ACAGTGAACCGGGAAGAAAAATGCCGGCTGATAAGGAACCAGCCTGTTCG										
Mus musculus	RefSeq	ILMN_219398	ILMN_219398	ACTN3	NM_013456.1	NM_013456.1		11474	7304854	NM_013456.1	Actn3	NP_038484.1	ILMN_2747543	004860577	S	2505	CCGAGAGACTGCCGAGACAGACACGGCTGAACAAGTGGTAGCCTCCTTCA	19	-	4861604-4861653	19qA	Mus musculus actinin alpha 3 (Actn3), mRNA.	Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils [goid 5865] [evidence TAS]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IPI]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	MGC132876	MGC132876
Mus musculus	RefSeq	ILMN_219398	ILMN_219398	ACTN3	NM_013456.1	NM_013456.1		11474	7304854	NM_013456.1	Actn3	NP_038484.1	ILMN_3008110	001190347	S	2421	AGTGGAGTTTGCTCGAATCATGACCATGGTGGACCCCAATGCAGCTGGGG	19	-	4861688-4861737	19qA	Mus musculus actinin alpha 3 (Actn3), mRNA.	Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils [goid 5865] [evidence TAS]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IPI]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	MGC132876	MGC132876
Mus musculus	RefSeq	ILMN_219398	ILMN_219398	ACTN3	NM_013456.1	NM_013456.1		11474	7304854	NM_013456.1	Actn3	NP_038484.1	ILMN_2708303	003140164	S	1224	GATCAGGCGTCTGCAGAGGCTTCAGCACCTGGCTGAGAAGTTCCAACAGA	19	-	4867570-4867619	19qA	Mus musculus actinin alpha 3 (Actn3), mRNA.	Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils [goid 5865] [evidence TAS]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IPI]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	MGC132876	MGC132876
Mus musculus	RefSeq	ILMN_212346	ILMN_212346	KCNK4	NM_008431.1	NM_008431.1		16528	6680539	NM_008431.1	Kcnk4	NP_032457.1	ILMN_2940227	000940324	S	1417	ATCCAAAAAGCCTTCCAGACCCCGGGGTCCTGGGCGACTCCGAGACAAGG	19	-	6993002-6993026:6993027-6993051	19qA	Mus musculus potassium channel, subfamily K, member 4 (Kcnk4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	TRAAK; MGC144821; TRAAKt	TRAAK; MGC144821; TRAAKt
Mus musculus	RefSeq	ILMN_223152	ILMN_223152	CCDC21	NM_144527.2	NM_144527.2		70012	31541891	NM_144527.2	Ccdc21	NP_653110.2	ILMN_2759983	002690528	S	3526	CAGCACCATGGACCTCCAGGGCCTGAGGGGCCGCTTTGCCAGTGTTTTAA	4	-	133686028-133686077	4qD3	Mus musculus coiled-coil domain containing 21 (Ccdc21), mRNA.				AI173504; 2410030J07Rik; AI173272	AI173504; 2410030J07Rik; AI173272
Mus musculus	Riken	ILMN_206071	ILMN_206071	D830035G05RIK	ri|D830035G05|PX00200G17|AK052906|1409					AK052906	D830035G05Rik		ILMN_1250206	002340348	S	1290	CTTGGTAGAGAGCAGGACAGGAGGCCAGGGGTTTTTGTTCTGAGCACTGC										
Mus musculus	RefSeq	ILMN_216027	ILMN_216027	OLFR151	NM_207664.1	NM_207664.1		406176	46575898	NM_207664.1	Olfr151	NP_997547.1	ILMN_1247715	001050743	S	588	GGCTGTCTTCTTTTTAGCTGGGTTCAACATTATAGTCACAAGCTTAACCG	9	-	37537929-37537978	9qA4	Mus musculus olfactory receptor 151 (Olfr151), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	M71; MOR171-2	M71; MOR171-2
Mus musculus	RefSeq	ILMN_216027	ILMN_216027	OLFR151	NM_207664.1	NM_207664.1		406176	46575898	NM_207664.1	Olfr151	NP_997547.1	ILMN_1221152	006960619	S	435	GGCTTTTGTCTATGCCGTAGGACTCATCGGTTCAGCAATTGAGACTGGCC	9	-	37538082-37538131	9qA4	Mus musculus olfactory receptor 151 (Olfr151), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	M71; MOR171-2	M71; MOR171-2
Mus musculus	RefSeq	ILMN_184915	ILMN_253969	SH3BGRL2	NM_172507.4	NM_172507.4		212531	146149296	NM_172507.4	Sh3bgrl2	NP_766095.1	ILMN_2622804	005270220	S	2995	CCCAGACAGTGCCATTTGAATATTAGGTGACCGTGAAACACCATACTGCC				9qE2	Mus musculus SH3 domain binding glutamic acid-rich protein like 2 (Sh3bgrl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	A930014C21Rik; B930089I21; AA408038	A930014C21Rik; B930089I21; AA408038
Mus musculus	MEEBO	ILMN_195505	ILMN_195505	9330177P20RIK	scl24950.13_6				31343360	NM_177462	9330177P20Rik		ILMN_2724005	006660020	S	3934	CCTTCGGACTTGCGGTCCCACCCTAAGACTGGCAGTCACATCATTAGTTC										
Mus musculus	RefSeq	ILMN_221724	ILMN_221724	GRK1	NM_011881.2	NM_011881.2		24013	67514550	NM_011881.2	Grk1	NP_036011.2	ILMN_1260000	001770731	S	1864	GCAAGACTTTCGGTCTAGACCCTACAGACATGACAGTCCTATTTGTCCTA	8	+	13416384-13416433	8qA1.1	Mus musculus G protein-coupled receptor kinase 1 (Grk1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the anatomical structure of the retina is generated and organized in a camera-type eye during the post-embryonic life stage . Morphogenesis pertains to the creation of form [goid 60060] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Morphogenesis of photoreceptors, sensory cells that react to the presence of light [goid 8594] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + rhodopsin = ADP + phosphorhodopsin [goid 50254] [evidence IEA]	Rhok; RK; GPRK1	Rhok; RK; GPRK1
Mus musculus	Riken	ILMN_203902	ILMN_203902	9430067P06RIK	ri|9430067P06|PX00110E07|AK034962|2024					AK034962	9430067P06Rik		ILMN_1228685	005690646	S	1795	GGGTCTGGGAAACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACC										
Mus musculus	RefSeq	ILMN_188293	ILMN_216920	MRAS	NM_008624.3	NM_008624.3		17532	145301550	NM_008624.3	Mras	NP_032650.1	ILMN_2451441	000160451	S	3886	CCCTTTGCGTGACAGTATTAGCAGGTGGCAGTTGTCGTGTGAGGAGCGAG				9qE3.3	Mus musculus muscle and microspikes RAS (Mras), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI326250	AI326250
Mus musculus	RefSeq	ILMN_216920	ILMN_216920	MRAS	NM_008624.3	NM_008624.3		17532	145301550	NM_008624.3	Mras	NP_032650.1	ILMN_1252830	006520156	S	1243	CCAAACCTTTTGTGTGTTGACTGAGCCCAGTTCCCAGTCTCTTGGTGGGC				9qE3.3	Mus musculus muscle and microspikes RAS (Mras), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI326250	AI326250
Mus musculus	RefSeq	ILMN_196523	ILMN_196523	3110007G05RIK	XM_196444.3	XM_196444.3			38089096	XM_196444.3	3110007G05Rik		ILMN_1213702	005220300	S	930	ACAGTTAGCAGTACGCAGCACTCCAGGTTCCTCTGATGGCCTGTGCACCA										
Mus musculus	MEEBO	ILMN_217511	ILMN_217511	4833447P13RIK	scl28568.1_97				51712537	XM_485812	4833447P13Rik		ILMN_2684133	000990564	S	1739	TTTGTTCCAAATATACTCCCAGGCTTTAACATTATCCCTATCTGGCTGTA										
Mus musculus	RefSeq	ILMN_224249	ILMN_247135	CYPT4	NM_173412.2	NM_173412.2		235067	115299746	NM_173412.2	Cypt4	NP_775588.2	ILMN_2777305	006020634	S	460	CCTGGCTCCGAATGGAGAATTGGCCAACTCCTAGACTCCGAATGGGTCCA	9	+	24430088-24430121:24430122-24430137	9qA4	Mus musculus cysteine-rich perinuclear theca 4 (Cypt4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			Ckt1r2; 1700009B20Rik	Ckt1r2; 1700009B20Rik
Mus musculus	RefSeq	ILMN_222409	ILMN_222409	POT1A	NM_133931.4	NM_133931.4		101185	146149244	NM_133931.4	Pot1a	NP_598692.1	ILMN_1259980	006840102	S	3015	TCCCGTATTGCATTATTGAGGTCTTAGCACAATTGAATGTTCTGCATTTT				6qA3.1	Mus musculus protection of telomeres 1A (Pot1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence ISO]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [evidence ISO]	1500031H18Rik; Pot1; AI851169	1500031H18Rik; Pot1; AI851169
Mus musculus	MEEBO	ILMN_185543	ILMN_185543	TRPM3	scl53279.29.1_22	NM_177341.2			31340944	NM_177341.2	Trpm3		ILMN_1247907	000870474	S	20	TTGAAGCAGAAGTTGGCAGATTCTACAGGCAACGAACTTTCTGGAATTTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence ISA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISA]		
Mus musculus	RefSeq	ILMN_211960	ILMN_211960	ARFGAP1	NM_145760.2	NM_145760.2		228998	31542138	NM_145760.2	Arfgap1	NP_665703.2	ILMN_2908546	002260373	S	2450	CTGCAGTTGAGACCCATGTGTTATCAGTGGTTGGTGTGACAGCCGCCCCC	2	+	180717002-180717051	2qH4	Mus musculus ADP-ribosylation factor GTPase activating protein 1 (Arfgap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	Arf1gap; AI115377	Arf1gap; AI115377
Mus musculus	RefSeq	ILMN_211960	ILMN_211960	ARFGAP1	NM_145760.2	NM_145760.2		228998	31542138	NM_145760.2	Arfgap1	NP_665703.2	ILMN_2700126	004220605	S	371	TGGGTCAGCGTGACTTATGGCATCTGGATCTGCCTGGAATGCTCTGGGAG	2	+	180706311-180706360	2qH4	Mus musculus ADP-ribosylation factor GTPase activating protein 1 (Arfgap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	Arf1gap; AI115377	Arf1gap; AI115377
Mus musculus	RefSeq	ILMN_211960	ILMN_211960	ARFGAP1	NM_145760.2	NM_145760.2		228998	31542138	NM_145760.2	Arfgap1	NP_665703.2	ILMN_2908547	006100537	S	2132	CCCTGGACAGCTCAGAAATGAGGAAAGGAGAGTAAAGGGGCCGGGAGCAT	2	+	180716684-180716733	2qH4	Mus musculus ADP-ribosylation factor GTPase activating protein 1 (Arfgap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	Arf1gap; AI115377	Arf1gap; AI115377
Mus musculus	RefSeq	ILMN_218143	ILMN_218143	CBX2	NM_007623.2	NM_007623.2		12416	31542345	NM_007623.2	Cbx2	NP_031649.2	ILMN_2692207	000380255	S	3175	AACCAACCTCAATGCTGTGCCTTTTGGGGCAGACCCATATCCACAGCTCC	11	+	118892019-118892068	11qE2	Mus musculus chromobox homolog 2 (Drosophila Pc class) (Cbx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	pc; MOD2; M33	pc; MOD2; M33
Mus musculus	RefSeq	ILMN_188398	ILMN_239869	MS4A13	NM_198224.3	NM_198224.3		73466	118130838	NM_198224.3	Ms4a13	NP_937867.2	ILMN_2452344	001500754	S	1275	GCTTCTACCTCCACAAAGCGAGGCTCAAATGGTCACCAATGTAGTGCCTT	19	-	11243958-11244007	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 13 (Ms4a13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Tetm4.2; 1700060E18Rik	Tetm4.2; 1700060E18Rik
Mus musculus	RefSeq	ILMN_188398	ILMN_239869	MS4A13	NM_198224.3	NM_198224.3		73466	118130838	NM_198224.3	Ms4a13	NP_937867.2	ILMN_2597916	007160601	S	655	CCCCCTGGAATTCGCCATTGCCCTCTTGTACTCAATCTCTAGTTGTGCAT	19	-	11247025-11247074	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 13 (Ms4a13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Tetm4.2; 1700060E18Rik	Tetm4.2; 1700060E18Rik
Mus musculus	RefSeq	ILMN_222432	ILMN_222432	OAZ3	NM_016901.1	NM_016901.1		53814	8567381	NM_016901.1	Oaz3	NP_058597.1	ILMN_1237630	001300041	S	809	TGTTCCATCTCTGTGAGGGGTTGGAAACCTCAACACACGGGACTCTGAGG	3	-	94237365-94237414	3qF2.1	Mus musculus ornithine decarboxylase antizyme 3 (Oaz3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways involving polyamines, any organic compound containing two or more amino groups [goid 6595] [evidence TAS]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The stopping, prevention or reduction of the activity of the enzyme ornithine decarboxylase [goid 8073] [evidence IDA]; The stopping, prevention or reduction of the activity of the enzyme ornithine decarboxylase [goid 8073] [evidence IGI]	AZ-3; Oaz-t	AZ-3; Oaz-t
Mus musculus	RefSeq	ILMN_248676	ILMN_248676	GM52	NM_001013751.1	NM_001013751.1		214292	85701451	NM_001013751.1	Gm52	NP_001013773.1	ILMN_3160198	000940301	S	1689	GGTTTTCAGGCCTTGTCTTCTTAACTGCCTGACTCATTCTGTATCGCGGC	5	-	135034225-135034274	5qG2	Mus musculus gene model 52, (NCBI) (Gm52), mRNA.	The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]			Gm453; syncytin-A	Gm453; syncytin-A
Mus musculus	RefSeq	ILMN_218075	ILMN_218075	LINGO1	NM_181074.4	NM_181074.4		235402	55926183	NM_181074.4	Lingo1	NP_851419.1	ILMN_3162809	004900390	I	3049	AACAGCACGGTCAGTGGAAAGAGTCAGGAGCCAGAGGCAGGCCGATTCCT	9	-	56466478-56466527	9qB	Mus musculus leucine rich repeat and Ig domain containing 1 (Lingo1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte differentiation [goid 48715] [evidence IMP]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IDA]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IPI]	AV148400; UNQ201; Lrrn6a; 4930471K13Rik; LINGO-1; LERN1	AV148400; UNQ201; Lrrn6a; 4930471K13Rik; LINGO-1; LERN1
Mus musculus	RefSeq	ILMN_218703	ILMN_218703	GPR81	NM_175520.3	NM_175520.3		243270	142354991	NM_175520.3	Gpr81	NP_780729.1	ILMN_2699134	003610136	S	2756	AGGTTGTCCCTGTGGCTTCCTTTGCCAGAGGTGTTGAAGCCTAGGTGCGA	5	-	124327207-124327256	5qF	Mus musculus G protein-coupled receptor 81 (Gpr81), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]		
Mus musculus	Riken	ILMN_203797	ILMN_203797	RASGRF1	ri|A230077F10|PX00129K18|AK038936|3046					AK038936	Rasgrf1		ILMN_2560053	002710156	S	2906	GGGATACAGTGGGAAGAGCTTCCTGGGTGCTAGAAGTTATCTTTGCCTTA						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rac protein signal transduction [goid 35020] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Any process that activates or increases the activity of a GTPase of the Ras superfamily [goid 32320] [evidence IDA]; Any process that initiates the activity of an inactive GTPase of the Rac family through the replacement of GDP by GTP [goid 32863] [evidence IDA]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Interacting selectively with a glutamate receptor [goid 35254] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_185351	ILMN_255450	SENP2	NM_029457.2	NM_029457.2		75826	31560058	NM_029457.2	Senp2	NP_083733.1	ILMN_1250929	007330008	S	2872	GGAGAGAGATTAGTACTTGGCTCTGAGGTTGCCAGGTTTACAGGCATCTA	16	+	22047740-22047789	16qB1	Mus musculus SUMO/sentrin specific peptidase 2 (Senp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein [goid 16926] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	SuPr-1; 2310007L05Rik; 4930538C18Rik; Smt3ip2; AW554757; mKIAA1331; AI646780; SUMO-1; KIAA1331	SuPr-1; 2310007L05Rik; 4930538C18Rik; Smt3ip2; AW554757; mKIAA1331; AI646780; SUMO-1; KIAA1331
Mus musculus	RefSeq	ILMN_221982	ILMN_221982	NCF4	NM_008677.1	NM_008677.1		17972	6679021	NM_008677.1	Ncf4	NP_032703.1	ILMN_2743013	002940504	S	1325	GATGTAAGATGCAAACCTCCTGGCCCAGAGTGCCTACTGGACAGGATTCT	15	+	78092904-78092953	15qE1	Mus musculus neutrophil cytosolic factor 4 (Ncf4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI451400; p40phox	AI451400; p40phox
Mus musculus	RefSeq	ILMN_216823	ILMN_216823	2310046K01RIK	NM_027172.2	NM_027172.2		69698	142350464	NM_027172.2	2310046K01Rik	NP_081448.1	ILMN_2675760	003140041	S	2192	GACAGTGCGGACCTCAAAAGGGGTAGCTCAGGCAGGATGAGTTTCGTCTG	2	+	151834610-151834659	2qG3	Mus musculus RIKEN cDNA 2310046K01 gene (2310046K01Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_195585	ILMN_195585	UVRAG	NM_178635.2	NM_178635.2		78610	31982283	NM_178635.2	Uvrag	NP_848750.2	ILMN_2516899	007000711	S	3125	AGCATAGGGAGAGGCAGGATGCCCAGTGTGCAGACCACGAGACAGTTGAG	7	-	106035485-106035534	7qE2	Mus musculus UV radiation resistance associated gene (Uvrag), mRNA.				AI648770; Uvrag1; 9530039D02Rik	AI648770; Uvrag1; 9530039D02Rik
Mus musculus	RefSeq	ILMN_201334	ILMN_237383	LOC546486	XM_906790.2	XM_906790.2		546486	94388970	XM_906790.2	LOC546486	XP_911883.2	ILMN_2541932	005130475	S	820	CTGGCCCAGCGGGATGAGGATGTGAATGTCAACATCTATAGGGCCAGGCA					PREDICTED: Mus musculus similar to C42C1.13 (LOC546486), mRNA.					
Mus musculus	MEEBO	ILMN_224035	ILMN_224035	1110003P22RIK	scl30654.9_73				31559967	NM_144522	1110003P22Rik		ILMN_1213881	004830114	S	3236	GCGCTTTGAGGAACCGGAAAATGAACCTGCTGTTATATCTGTCTCCCGCC										
Mus musculus	RefSeq	ILMN_189256	ILMN_189256	TMOD1	NM_021883.1	NM_021883.1		21916	11230777	NM_021883.1	Tmod1	NP_068683.1	ILMN_2977404	000620615	S	1200	CAGGACGAATGCTGGCGTGGAGCTCTTGTGGCTCAGTTCTTTGTGCACTG	4	+	46135549-46135598	4qB1	Mus musculus tropomodulin 1 (Tmod1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence TAS]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]	Formation of myofibrils, the repeating units of striated muscle [goid 30239] [evidence IMP]; Formation of the myosin-based thick filaments of myofibrils [goid 30241] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]	E-Tmod; MGC124126; Tmod; MGC124125	E-Tmod; MGC124126; Tmod; MGC124125
Mus musculus	MEEBO	ILMN_221618	ILMN_221618	HYAL4	scl30312.5.1_180	XM_132998.1			20915091	XM_132998.1	Hyal4		ILMN_2737914	002600398	S	3034	CCAACAAACCCCTACCATATGCTGGTAACTTTTGGTGTACTATTTACTAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_219310	ILMN_219310	ZBTB41	NM_172643.3	NM_172643.3		226470	146198664	NM_172643.3	Zbtb41	NP_766231.1	ILMN_2707088	006250136	S	4280	GGGTTGCTGATGCTTAAGACAGGTAGGGTTGGCTCACTGTTAACATGCAG				1qF	Mus musculus zinc finger and BTB domain containing 41 homolog (Zbtb41), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI316857; 9430031N01; 8430415N23Rik; 9830132G07Rik	AI316857; 9430031N01; 8430415N23Rik; 9830132G07Rik
Mus musculus	RefSeq	ILMN_245904	ILMN_245904	GM1070	NM_001033462.1	NM_001033462.1		381785	85701978	NM_001033462.1	Gm1070	NP_001028634.1	ILMN_2835227	005310296	S	2108	TTGACAACCTGTGCTCCATCCCTGGGTCCTTCATGGCGGGAGGAGAGAGA	6	+	71232275-71232324	6qC1	Mus musculus gene model 1070, (NCBI) (Gm1070), mRNA.					
Mus musculus	RefSeq	ILMN_196764	ILMN_196764	IFNA11	NM_008333.1	NM_008333.1		15964	6680364	NM_008333.1	Ifna11	NP_032359.1	ILMN_2769241	000130470	S	1428	CCTGGGAATAAACCCCACTCATAATAGCCTCATAAGCCAGCCCTGGGAAG	4	+	88467224-88467273	4qC4	Mus musculus interferon alpha 11 (Ifna11), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	IFN-[a]11	IFN-[a]11
Mus musculus	RefSeq	ILMN_196761	ILMN_196764	IFNA11	NM_008333.1	NM_008333.1		15964	6680364	NM_008333.1	Ifna11	NP_032359.1	ILMN_2648399	003420360	S	565	GTCAGAGCAGAAGTCTGGAGAGCCCTGTCTTCCTCAGTTAACTTGCTGGC	4	+	88466361-88466410	4qC4	Mus musculus interferon alpha 11 (Ifna11), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	IFN-[a]11	IFN-[a]11
Mus musculus	Riken	ILMN_206838	ILMN_206838	OSMR	ri|E030032F15|PX00206L22|AK087179|2144					AK087179	Osmr		ILMN_2583052	000510707	S	1589	CTCCATCAGGCCCTTACTTCAACATTGGTTCATAGTGTGGATGATCTGTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with oncostatin-M to initiate a change in cell activity [goid 4924] [evidence IDA];  [goid 4896] [evidence IEA]		
Mus musculus	Riken	ILMN_203826	ILMN_203826	A230065N10RIK	ri|A230065N10|PX00129C08|AK038819|1030					AK038819	A230065N10Rik		ILMN_2560269	007100286	S	704	CCAAACCTTTCCTTGCGGGACCAGATTTTCCTTGAGGATATGCGCGGGGG										
Mus musculus	Riken	ILMN_206717	ILMN_206717	B930095I24RIK	ri|B930095I24|PX00166H01|AK081168|849					AK081168	B930095I24Rik		ILMN_2582179	000460673	S	547	GCACCCTGGGAGCTGATGACCTAAGATTCCTTTGAGTAACACCCAGAGAC										
Mus musculus	RefSeq	ILMN_218663	ILMN_218663	THRB	NM_009380.2	NM_009380.2		21834	118130406	NM_009380.2	Thrb	NP_033406.1	ILMN_2698682	001450082	S	1423	TGTCATCTTTCAACCTGGATGACACTGAAGTCGCCCTGCTTCAGGCCGTC	14	+	18862850-18862899	14qA2	Mus musculus thyroid hormone receptor beta (Thrb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with thyroid hormone to initiate a change in cell activity [goid 4887] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	MGC141270; MGC141269; T3R[b]; Nr1a2; Thrb1; T3Rbeta; c-erbAbeta; Thrb2	MGC141270; MGC141269; T3R[b]; Nr1a2; Thrb1; T3Rbeta; c-erbAbeta; Thrb2
Mus musculus	RefSeq	ILMN_222676	ILMN_222676	C130023O10RIK	NM_177110.2	NM_177110.2		320230	31342825	NM_177110.2	C130023O10Rik	NP_796084.1	ILMN_2753279	002140544	S	1814	ATTAGAAAACAAATGTTAGCTAAAACACATTTAGAAAAACATTTCAAGTA				2qE3	Mus musculus RIKEN cDNA C130023O10 gene (C130023O10Rik), mRNA.					
Mus musculus	MEEBO	ILMN_189399	ILMN_189399	V1RG4	scl9206.1.1_320				21717724	NM_134205	V1rg4		ILMN_2460929	005900730	S	16	TTGTTCTTATCAGCAACATGAAGTCTAGGGCCAGTGTGTTTTTACCCTGC						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_215604	ILMN_215604	MNAT1	NM_008612.2	NM_008612.2		17420	89363037	NM_008612.2	Mnat1	NP_032638.2	ILMN_2758632	006330368	S	751	GCAGCTCGAGAAGCCCAGATCCATGAAGCCAGTGACGTTTTCCACAGGAA	12	+	74289195-74289244	12qC3	Mus musculus menage a trois 1 (Mnat1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the activity of an enzyme [goid 50790] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process whose specific outcome is the progression of the brain ventricular system over time, from its formation to the mature structure. The brain ventricular system consists of four communicating cavities within the brain that are continuous with the central canal of the spinal cord. These cavities include two lateral ventricles, the third ventricle and the fourth ventricle. Cerebrospinal fluid fills the ventricles and is produced by the choroid plexus [goid 21591] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; The chemical reactions and pathways in multicellular organisms that occur at the tissue, organ, or organismal level. These processes, unlike cellular metabolism, can include transport of substances between cells when that transport is required [goid 44236] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	P36; E130115E11Rik; MAT1	P36; E130115E11Rik; MAT1
Mus musculus	RefSeq	ILMN_221977	ILMN_221977	FXYD5	NM_008761.2	NM_008761.2		18301	11612666	NM_008761.2	Fxyd5	NP_032787.1	ILMN_1235493	004780196	S	694	TGAAAGAATCCTGAAAGGAAGAGGCCACTGGAGGGAGTCAGGCTTAAGGC	7	-	31817826-31817875	7qB1	Mus musculus FXYD domain-containing ion transport regulator 5 (Fxyd5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	RIC; Oit2; EF-8	RIC; Oit2; EF-8
Mus musculus	RefSeq	ILMN_221977	ILMN_221977	FXYD5	NM_008761.2	NM_008761.2		18301	11612666	NM_008761.2	Fxyd5	NP_032787.1	ILMN_2742928	005310672	S	265	CCCAAACCGAGACCCAGCAACTGACAAAAATGGCCACCTCGAATCCAGTG	7	-	31822871-31822920	7qB1	Mus musculus FXYD domain-containing ion transport regulator 5 (Fxyd5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	RIC; Oit2; EF-8	RIC; Oit2; EF-8
Mus musculus	RefSeq	ILMN_221977	ILMN_221977	FXYD5	NM_008761.2	NM_008761.2		18301	11612666	NM_008761.2	Fxyd5	NP_032787.1	ILMN_2967266	002630008	S	545	GTAGGCAGTTGTCTCAATTTTGCCTGAATCGCCACAGGTGAGTGCGGGCC	7	-	31817975-31817987:31817988-31818024	7qB1	Mus musculus FXYD domain-containing ion transport regulator 5 (Fxyd5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	RIC; Oit2; EF-8	RIC; Oit2; EF-8
Mus musculus	RefSeq	ILMN_217066	ILMN_217066	ATG5	NM_053069.2	NM_053069.2		11793	31542134	NM_053069.2	Atg5	NP_444299.1	ILMN_2998135	003850450	S	2190	GGAAAGTTTGCTGCACTCTCTCGATGGCTGCTTGGAGACTCCTGCTGTTG	10	+	44052544-44052593	10qB2	Mus musculus autophagy-related 5 (yeast) (Atg5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IDA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence ISA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]	The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IDA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [evidence IMP]; The process whose specific outcome is the progression of a ventricular cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55015] [evidence IMP]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence IMP]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31397] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Paddy; Atg5l; AW319544; 2010107M05Rik; Apg5l; C88337; 3110067M24Rik	Paddy; Atg5l; AW319544; 2010107M05Rik; Apg5l; C88337; 3110067M24Rik
Mus musculus	RefSeq	ILMN_217066	ILMN_217066	ATG5	NM_053069.2	NM_053069.2		11793	31542134	NM_053069.2	Atg5	NP_444299.1	ILMN_2998139	004810064	S	2251	AGCTTGCTGTCCACATTGAATGTCAACCCATCTGAGTATGCTAAAAGATG	10	+	44052605-44052654	10qB2	Mus musculus autophagy-related 5 (yeast) (Atg5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IDA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence ISA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]	The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IDA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [evidence IMP]; The process whose specific outcome is the progression of a ventricular cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55015] [evidence IMP]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence IMP]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31397] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Paddy; Atg5l; AW319544; 2010107M05Rik; Apg5l; C88337; 3110067M24Rik	Paddy; Atg5l; AW319544; 2010107M05Rik; Apg5l; C88337; 3110067M24Rik
Mus musculus	MEEBO	ILMN_196221	ILMN_196221	GNAI1	scl0014677.1_236				51710872	XM_355574	Gnai1		ILMN_2522685	002350411	S	5	AGTCACGACCCTCAGTTCTGCAAAAGAGCCCGTCGCAAAAAAAGGCCGCT						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198669	ILMN_259433	LOC331528	XM_886275.2	XM_886275.2		331528	94408195	XM_886275.2	LOC331528	XP_891368.2	ILMN_1223578	000610669	S	92	GACCAGACTACAGGTGTGCCTCAAGATCTGGATTAAAGGGTGCCTGGAGC					PREDICTED: Mus musculus hypothetical LOC331528 (LOC331528), mRNA.					
Mus musculus	RefSeq	ILMN_210458	ILMN_210458	NEU4	NM_173772.3	NM_173772.3		241159	47271519	NM_173772.3	Neu4	NP_776133.1	ILMN_2716254	004290176	S	1642	GAGGAGGTTAGGGGTAGGTCAGCATGATGCTAGGATGGAGAGAGCTCTGT	1	+	95922042-95922091	1qD	Mus musculus sialidase 4 (Neu4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates [goid 4308] [evidence IDA]	9330166I04	9330166I04
Mus musculus	RefSeq	ILMN_210458	ILMN_210458	NEU4	NM_173772.3	NM_173772.3		241159	47271519	NM_173772.3	Neu4	NP_776133.1	ILMN_2605810	004540520	S	1612	GCCGCCTGGAGAGGAAGGGTAGACTATATAGAGGAGGTTAGGGGTAGGTC	1	+	95922012-95922061	1qD	Mus musculus sialidase 4 (Neu4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates [goid 4308] [evidence IDA]	9330166I04	9330166I04
Mus musculus	RefSeq	ILMN_210458	ILMN_210458	NEU4	NM_173772.3	NM_173772.3		241159	47271519	NM_173772.3	Neu4	NP_776133.1	ILMN_2686167	001690634	S	1653	GGGTAGGTCAGCATGATGCTAGGATGGAGAGAGCTCTGTCCCCTCGTGGA	1	+	95922053-95922102	1qD	Mus musculus sialidase 4 (Neu4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates [goid 4308] [evidence IDA]	9330166I04	9330166I04
Mus musculus	MEEBO	ILMN_210364	ILMN_210364	MYH9	scl0002520.1_2159	NM_181327.2			31342001	NM_181327.2	Myh9		ILMN_2604864	001470270	S	2825	GGTCACTGTCTTGTGGGTCCTTCAGTTTCACCCTGCTTTGGATGGCAGGT						An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence ISO]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISO]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence ISO]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a uropod, a rigid membrane projection with related cytoskeletal components at the trailing edge of a lymphocyte or other cell in the process of migrating or being activated [goid 32796] [evidence IMP]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IMP]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence ISO]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Progression through metaphase of meiosis I; analogous to mitotic metaphase [goid 7132] [evidence IDA]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]; The directed orientation of T cell signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with antigen presenting cell [goid 1768] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The cell cycle process whereby the directed movement of the meiotic spindle to a specific location in the cell occurs [goid 51295] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle [goid 212] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]	Interacting selectively with ADP, adenosine 5'-diphosphate [goid 43531] [evidence ISO]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of an actin filament to accelerate release of ADP and phosphate [goid 30898] [evidence ISO]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of an actin filament to accelerate release of ADP and phosphate [goid 30898] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_203855	ILMN_203855	A630014N10RIK	ri|A630014N10|PX00144D15|AK041487|2683					AK041487	A630014N10Rik		ILMN_2560476	002680209	S	706	GGAAATGTACAGAATCGGAGCATCAGCTGTGAGTCCAGAGGACAGGCTGG										
Mus musculus	Riken	ILMN_207257	ILMN_207257	G630013P12RIK	ri|G630013P12|PL00012F20|AK090184|1429					AK090184	G630013P12Rik		ILMN_2586230	005220349	S	1108	GGGAGTCCTGAGAGTTCAGCAGCTCAGGTGTGTGAGCACTGTTGTGTTTT										
Mus musculus	RefSeq	ILMN_216114	ILMN_216114	PSMB2	NM_011970.3	NM_011970.3		26445	142376021	NM_011970.3	Psmb2	NP_036100.2	ILMN_2765890	003170427	S	683	GCGGGACTCCTAACGTCACGTCCTTCCCTCCCACTCACCAGGGAACTTTT	4	+	126386818-126386830:126386831-126386867	4qD2.2	Mus musculus proteasome (prosome, macropain) subunit, beta type 2 (Psmb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	C7-I; AW108089; D4Wsu33e; AU045357	C7-I; AW108089; D4Wsu33e; AU045357
Mus musculus	MEEBO	ILMN_211798	ILMN_211798	GRIK3	scl24974.11.1_139	XM_131647.2			38078799	XM_131647.2	Grik3		ILMN_2619640	004570377	S	2901	CGGGGACTTCAGGCCCAGTCCACGCAGAGGAAGGCAAAGGAGACCCGAAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence ISO]		
Mus musculus	RefSeq	ILMN_197568	ILMN_197568	WDR49	XM_143339.5	XM_143339.5		213248	94369651	XM_143339.5	Wdr49	XP_143339.5	ILMN_1219856	001820246	S	2976	GGAAGGGCCGGAAGAGGATGTATCCCAAATTCCAGAGCTTCCTCTGCTCT	3	-	75102033-75102082	3qE3	PREDICTED: Mus musculus WD repeat domain 49 (Wdr49), mRNA.					
Mus musculus	MEEBO	ILMN_195725	ILMN_195725	WBP7	scl9130.2.1_28						Wbp7		ILMN_1254977	002070280	S	3	CGCTCCTCCCGTGTTATCAAGACACCCCGGCGATTTATGGATGAAGATCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200847	ILMN_200847	LOC381873	XM_355885.1	XM_355885.1			38086524	XM_355885.1	LOC381873		ILMN_1217611	005860326	S	384	GAGAAGTACGCTGTGGATGATGTCCAGTACACGGATGAGGTACGTAGCTG										
Mus musculus	Riken	ILMN_205617	ILMN_205617	D130031K05RIK	ri|D130031K05|PX00183B02|AK051297|2923					AK051297	D130031K05Rik		ILMN_2573940	001710673	S	2816	TCCAGCATGGTGACTGCCTGTAACTCCACTTCCCAGGGATCCAAAGCCTC										
Mus musculus	RefSeq	ILMN_196821	ILMN_196615	ASH1L	NM_138679.5	NM_138679.5		192195	76096373	NM_138679.5	Ash1l	NP_619620.3	ILMN_1223056	001030059	S	9755	GAGCAGTGTTCACTCTCGGAGTGTTTGTTCTAAGTGTAGGTTACCGACTG	3	+	88881782-88881831	3qF1	Mus musculus ash1 (absent, small, or homeotic)-like (Drosophila) (Ash1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	8030453L17Rik; E430018P19Rik; Ash1	8030453L17Rik; E430018P19Rik; Ash1
Mus musculus	RefSeq	ILMN_203454	ILMN_196615	ASH1L	NM_138679.5	NM_138679.5		192195	76096373	NM_138679.5	Ash1l	NP_619620.3	ILMN_1243996	003940730	S	543	CAGGTGACGCTACAGCCATCGACTGCCAAGCCGAAGAAAGCATCCATCTT	3	+	88785180-88785229	3qF1	Mus musculus ash1 (absent, small, or homeotic)-like (Drosophila) (Ash1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	8030453L17Rik; E430018P19Rik; Ash1	8030453L17Rik; E430018P19Rik; Ash1
Mus musculus	RefSeq	ILMN_196615	ILMN_196615	ASH1L	NM_138679.5	NM_138679.5		192195	76096373	NM_138679.5	Ash1l	NP_619620.3	ILMN_2525029	007380471	S	10429	GAGAGAAAGAGGGGATGGCATAGATCCCCTTGAGCAGAGAAAAAGCAAAA	3	+	88882456-88882505	3qF1	Mus musculus ash1 (absent, small, or homeotic)-like (Drosophila) (Ash1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	8030453L17Rik; E430018P19Rik; Ash1	8030453L17Rik; E430018P19Rik; Ash1
Mus musculus	RefSeq	ILMN_196615	ILMN_196615	ASH1L	NM_138679.5	NM_138679.5		192195	76096373	NM_138679.5	Ash1l	NP_619620.3	ILMN_2654787	002900731	S	5121	GCACAAATTGTAGCCCTACTCGTAAAAGGTCTTCATCTGAGAGTACTTCT	3	+	88805740-88805789	3qF1	Mus musculus ash1 (absent, small, or homeotic)-like (Drosophila) (Ash1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	8030453L17Rik; E430018P19Rik; Ash1	8030453L17Rik; E430018P19Rik; Ash1
Mus musculus	RefSeq	ILMN_196615	ILMN_196615	ASH1L	NM_138679.5	NM_138679.5		192195	76096373	NM_138679.5	Ash1l	NP_619620.3	ILMN_1245687	007050563	S	2824	GGCTCCATTTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCTGAAAGTG	3	+	88787461-88787510	3qF1	Mus musculus ash1 (absent, small, or homeotic)-like (Drosophila) (Ash1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	8030453L17Rik; E430018P19Rik; Ash1	8030453L17Rik; E430018P19Rik; Ash1
Mus musculus	RefSeq	ILMN_199391	ILMN_199391	OLFR535	NM_146954.1	NM_146954.1		258956	22129008	NM_146954.1	Olfr535	NP_667165.1	ILMN_2535079	006220762	S	241	CCCAAGGCTCTGATTGGCCTAGTGTTTGAGGAAAATACCATCTCCTTCAA	7	+	147678779-147678828	7qF4	Mus musculus olfactory receptor 535 (Olfr535), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR253-7	MOR253-7
Mus musculus	RefSeq	ILMN_199391	ILMN_199391	OLFR535	NM_146954.1	NM_146954.1		258956	22129008	NM_146954.1	Olfr535	NP_667165.1	ILMN_2763538	005360301	S	411	AATGAGTCCACAGCTATGTGGGGTACTGGCCATGAGTGTGTGGTCTGTCT	7	+	147678949-147678998	7qF4	Mus musculus olfactory receptor 535 (Olfr535), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR253-7	MOR253-7
Mus musculus	RefSeq	ILMN_199391	ILMN_199391	OLFR535	NM_146954.1	NM_146954.1		258956	22129008	NM_146954.1	Olfr535	NP_667165.1	ILMN_1236938	005360639	S	409	GAATGAGTCCACAGCTATGTGGGGTACTGGCCATGAGTGTGTGGTCTGTC	7	+	147678947-147678996	7qF4	Mus musculus olfactory receptor 535 (Olfr535), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR253-7	MOR253-7
Mus musculus	RefSeq	ILMN_184564	ILMN_184564	TRPM5	NM_020277.2	NM_020277.2		56843	148271108	NM_020277.2	Trpm5	NP_064673.2	ILMN_2419687	001940068	S	3255	TCAAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCG				7qF5	Mus musculus transient receptor potential cation channel, subfamily M, member 5 (Trpm5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	9430099A16Rik; Ltrpc5; Mtr1	9430099A16Rik; Ltrpc5; Mtr1
Mus musculus	MEEBO	ILMN_212390	ILMN_212390	1500010G04RIK	scl068965.1_2	NM_173366.1			27734051	NM_173366.1	1500010G04Rik		ILMN_1228020	003940050	S	3620	CGAATTCTAGGCTTAAGGATTCAGACTTGAATCCAGCGCTCACTAAGGGC										
Mus musculus	MEEBO	ILMN_212390	ILMN_212390	1500010G04RIK	scl068965.1_2	NM_173366.1			27734051	NM_173366.1	1500010G04Rik		ILMN_1240425	000020523	S	990	CCTCTGAAAACTCCTTTACAGATCTTTATGGCTAAACTGCCAAGACATCT										
Mus musculus	Riken	ILMN_205709	ILMN_205709	B430201C15RIK	ri|B430201C15|PX00071M03|AK046596|2553					AK046596	B430201C15Rik		ILMN_2574633	000290364	S	2443	AATGACTAAGTGACTGGGGTTGTTTCATCAGGTTTTCCGGAGTTCCCATC										
Mus musculus	RefSeq	ILMN_201568	ILMN_248746	EG546487	XM_621234.3	XM_621234.3		546487	149261120	XM_621234.3	EG546487	XP_621234.3	ILMN_1242092	006420220	S	1238	TCACAAACATCTTCATCCCCAGGGTCCTGGTCAGCATTACAACGGGAAAC	10	-	128483856-128483905	10qD3	PREDICTED: Mus musculus predicted gene, EG546487 (EG546487), mRNA.					
Mus musculus	RefSeq	ILMN_211954	ILMN_211954	RUFY3	NM_027530.2	NM_027530.2		52822	31542481	NM_027530.2	Rufy3	NP_081806.1	ILMN_2710484	005340301	S	3881	GGTGGCTTCAGCGTCAATTACTCTGTACCTGAGGGTGGCTCTGGGTATGG	5	+	89071591-89071640	5qE1	Mus musculus RUN and FYVE domain containing 3 (Rufy3), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330416M07Rik; mKIAA0871; Rpipx; D5Bwg0860e; AW455998; Ripx; 2810428M05Rik; AW538594	6330416M07Rik; mKIAA0871; Rpipx; D5Bwg0860e; AW455998; Ripx; 2810428M05Rik; AW538594
Mus musculus	RefSeq	ILMN_211954	ILMN_211954	RUFY3	NM_027530.2	NM_027530.2		52822	31542481	NM_027530.2	Rufy3	NP_081806.1	ILMN_2962364	004860132	S	3885	GCTTCAGCGTCAATTACTCTGTACCTGAGGGTGGCTCTGGGTATGGATTT	5	+	89071595-89071644	5qE1	Mus musculus RUN and FYVE domain containing 3 (Rufy3), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330416M07Rik; mKIAA0871; Rpipx; D5Bwg0860e; AW455998; Ripx; 2810428M05Rik; AW538594	6330416M07Rik; mKIAA0871; Rpipx; D5Bwg0860e; AW455998; Ripx; 2810428M05Rik; AW538594
Mus musculus	RefSeq	ILMN_211954	ILMN_211954	RUFY3	NM_027530.2	NM_027530.2		52822	31542481	NM_027530.2	Rufy3	NP_081806.1	ILMN_2962361	002470626	S	3710	CGTTCACAGAGTGTCCTTGTGGAGGTGAAGCCTGGGTAAGGTTGCTACAG	5	+	89071420-89071469	5qE1	Mus musculus RUN and FYVE domain containing 3 (Rufy3), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	6330416M07Rik; mKIAA0871; Rpipx; D5Bwg0860e; AW455998; Ripx; 2810428M05Rik; AW538594	6330416M07Rik; mKIAA0871; Rpipx; D5Bwg0860e; AW455998; Ripx; 2810428M05Rik; AW538594
Mus musculus	RefSeq	ILMN_234927	ILMN_234927	GRM7	NM_177328.3	NM_177328.3		108073	118130419	NM_177328.3	Grm7	NP_796302.2	ILMN_2872782	002690343	S	2890	TCGAGGCTGTCACACAAACCCAGTGACAGGCCCAATGGTGAGGCAAAGAC	6	+	111445815-111445864	6qE3	Mus musculus glutamate receptor, metabotropic 7 (Grm7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane portion of the presynaptic active zone; it is the site where docking and fusion of synaptic vesicles occurs for the release of neurotransmitters [goid 48787] [evidence TAS]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus [goid 1661] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information received a short time (up to about 30 minutes) ago. This type of memory is typically dependent on direct, transient effects of second messenger activation [goid 7614] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; A change in state or activity of a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 33555] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5246] [evidence IDA]; A G-protein coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity [goid 1642] [evidence TAS]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence TAS]	C030018L03; 6330570A01Rik; Gprc1g; E130018M02Rik; Gpr1g; BB176677; MGC90857; mGluR7	C030018L03; 6330570A01Rik; Gprc1g; E130018M02Rik; Gpr1g; BB176677; MGC90857; mGluR7
Mus musculus	RefSeq	ILMN_188551	ILMN_234927	GRM7	NM_177328.3	NM_177328.3		108073	118130419	NM_177328.3	Grm7	NP_796302.2	ILMN_1247084	007160605	S	3953	GAGGTTTTGTTCATGCCCCTATGACTGACCAATGTGATAAGGACTTTAAA	6	+	111516996-111517045	6qE3	Mus musculus glutamate receptor, metabotropic 7 (Grm7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane portion of the presynaptic active zone; it is the site where docking and fusion of synaptic vesicles occurs for the release of neurotransmitters [goid 48787] [evidence TAS]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus [goid 1661] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information received a short time (up to about 30 minutes) ago. This type of memory is typically dependent on direct, transient effects of second messenger activation [goid 7614] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; A change in state or activity of a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 33555] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5246] [evidence IDA]; A G-protein coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity [goid 1642] [evidence TAS]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence TAS]	C030018L03; 6330570A01Rik; Gprc1g; E130018M02Rik; Gpr1g; BB176677; MGC90857; mGluR7	C030018L03; 6330570A01Rik; Gprc1g; E130018M02Rik; Gpr1g; BB176677; MGC90857; mGluR7
Mus musculus	RefSeq	ILMN_257592	ILMN_257592	OLFR310	NM_001011520.1	NM_001011520.1		258222	58372125	NM_001011520.1	Olfr310	NP_001011520.1	ILMN_2886477	000020653	S	733	GTGGTGTCTGTCTTTGTTAGTTCTGCTGCCTTTGTGTATCTACGACCTCC	7	-	93417515-93417564	7qD3	Mus musculus olfactory receptor 310 (Olfr310), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR227-6P	MOR227-6P
Mus musculus	Riken	ILMN_204869	ILMN_204869	A130087I02RIK	ri|A130087I02|PX00125P14|AK038223|1001					AK038223	A130087I02Rik		ILMN_1232144	005420348	S	566	CGCTATGATCCTACCGTTTGGAAGGCTGAGGCGGGAGTTCAAGACCAGCC										
Mus musculus	Riken	ILMN_204305	ILMN_204305	4632412I06RIK	ri|4632412I06|PX00012J07|AK019493|3768					AK019493	4632412I06Rik		ILMN_1237943	006130192	S	3560	GGCTAGGGCTAAGCCAGGCCATCACTTTATCACTGAGTTAGCACCCCAAC										
Mus musculus	RefSeq	ILMN_220347	ILMN_220347	TCTEX1D2	NM_025329.3	NM_025329.3		66061	148540053	NM_025329.3	Tctex1d2	NP_079605.1	ILMN_2720925	005910372	S	512	GGTGGCAGCATTTGGGTGTTTCTACTATTGAATCGTTGGGAAGTGTGACT				16qB3	Mus musculus Tctex1 domain containing 2 (Tctex1d2), mRNA.				2410011K15Rik	2410011K15Rik
Mus musculus	MEEBO	ILMN_191484	ILMN_191484	SCL0001065.1_54	scl0001065.1_54	AK021056.1			12861828	AK021056.1	scl0001065.1_54		ILMN_1222935	001070494	S	11	GTGCAAACGATGCTATTGGCAAGGTGTACATTGACATCGACCCTTTACTG										
Mus musculus	RefSeq	ILMN_196417	ILMN_196417	CRB2	XM_140952.9	XM_140952.9		241324	94366261	XM_140952.9	Crb2	XP_140952.9	ILMN_1258618	004230008	S	3614	AGGGATGCAACCTCAACTCCACATGCAAGGATGGCGCCCCTTGTGAAGGC					PREDICTED: Mus musculus crumbs homolog 2 (Drosophila) (Crb2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_198446	ILMN_198446	LOC381226	XM_355163.1	XM_355163.1			38085171	XM_355163.1	LOC381226		ILMN_2531713	004050605	S	700	GGCCGGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTATGTGGTCAA										
Mus musculus	RefSeq	ILMN_258222	ILMN_258222	FZD3	NM_021458.1	NM_021458.1		14365	10946845	NM_021458.1	Fzd3	NP_067433.1	ILMN_2801520	001410025	S	2266	GGCACCAGCATGAACCGTGTTATTGAGGAGGATGGAACCAGTGCTTAGTC	14	-	65821536-65821555:65821556-65821585	14qD1	Mus musculus frizzled homolog 3 (Drosophila) (Fzd3), mRNA.	The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates [goid 1736] [evidence IGI]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU020229; Fz3	AU020229; Fz3
Mus musculus	RefSeq	ILMN_213756	ILMN_213756	SCYL2	NM_198021.2	NM_198021.2		213326	118130768	NM_198021.2	Scyl2	NP_932138.1	ILMN_1230364	006040468	S	3306	AGATCCAGTCCTTACTAGTCTCAAAGTGCGAAAGGACAACTGAATTATCC	10	-	89102927-89102976	10qC2	Mus musculus SCY1-like 2 (S. cerevisiae) (Scyl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AW536445; AU015688; D10Ertd802e; BC030932	AW536445; AU015688; D10Ertd802e; BC030932
Mus musculus	RefSeq	ILMN_245635	ILMN_245635	382044	NM_001081372.1	NM_001081372.1		382044	124487012	NM_001081372.1	382044	NP_001074841.1	ILMN_3112143	004760672	A	755	TGGGTCATCAGCAGGAGGTGTCAGTGTCTCTGTCCTTGTCTTATCTCCTC	8	-	95593266-95593279:95595766-95595801	8qC5	Mus musculus predicted gene, 382044 (382044), mRNA.					
Mus musculus	RefSeq	ILMN_201162	ILMN_245635	382044	NM_001081372.1	NM_001081372.1		382044	124487012	NM_001081372.1	382044	NP_001074841.1	ILMN_1247422	003400192	S	1317	GGAACAGATGACCCTGCCAAAAAGAGAGACCTTCTCCTGGACATGTTTTC	8	-	95586932-95586981	8qC5	Mus musculus predicted gene, 382044 (382044), mRNA.					
Mus musculus	RefSeq	ILMN_219090	ILMN_219090	YKT6	NM_019661.3	NM_019661.3		56418	133893017	NM_019661.3	Ykt6	NP_062635.2	ILMN_1246405	004920095	S	1730	GGTGAATCCAGAGTGTGCCCGGTTCCACATCACCTCTTCATGGTCTGCTG	11	+	5867111-5867160	11qA1	Mus musculus YKT6 homolog (S. Cerevisiae) (Ykt6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process by which vesicles are directed to specific destination membranes, mediated by microtubules that grow between molecules at the vesicle membrane and target membrane surfaces [goid 6903] [evidence ISS]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence ISS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence ISS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a palmitoleyl group to a sulfur atom on the cysteine of a protein molecule [goid 19706] [evidence ISS]	AW105923; RP23-340E18.4; 0610042I15Rik; 1810013M05Rik	AW105923; RP23-340E18.4; 0610042I15Rik; 1810013M05Rik
Mus musculus	RefSeq	ILMN_185316	ILMN_240894	6030408C04RIK	NM_001015099.1	NM_001015099.1		217558	62821812	NM_001015099.1	6030408C04Rik	NP_001015099.1	ILMN_1243663	001510132	S	1034	GTTGGAAGAGTCATCATCTAAGCTCCCCAGACAGTCAACTGTAGCCCAGC	12	+	52464468-52464517	12qC1	Mus musculus RIKEN cDNA 6030408C04 gene (6030408C04Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	AW046379; D930034K21Rik; 9030416F18; mKIAA1333	AW046379; D930034K21Rik; 9030416F18; mKIAA1333
Mus musculus	RefSeq	ILMN_185316	ILMN_240894	6030408C04RIK	NM_001015099.1	NM_001015099.1		217558	62821812	NM_001015099.1	6030408C04Rik	NP_001015099.1	ILMN_1215304	004540044	S	898	CCTGTTCCTCACTACAGTCTTGGGAACAAAATTGGGAGTGTTTGGACTGT	12	+	52464226-52464275	12qC1	Mus musculus RIKEN cDNA 6030408C04 gene (6030408C04Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	AW046379; D930034K21Rik; 9030416F18; mKIAA1333	AW046379; D930034K21Rik; 9030416F18; mKIAA1333
Mus musculus	RefSeq	ILMN_185316	ILMN_240894	6030408C04RIK	NM_001015099.1	NM_001015099.1		217558	62821812	NM_001015099.1	6030408C04Rik	NP_001015099.1	ILMN_1225047	006420608	S	2012	CCCACCAACTGGATTTAAACCCTCTCTGTCAGTTGAATGTCTACATGTGG	12	+	52473478-52473527	12qC1	Mus musculus RIKEN cDNA 6030408C04 gene (6030408C04Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	AW046379; D930034K21Rik; 9030416F18; mKIAA1333	AW046379; D930034K21Rik; 9030416F18; mKIAA1333
Mus musculus	Riken	ILMN_205728	ILMN_205728	9830166G06RIK	ri|9830166G06|PX00119M19|AK036717|3953					AK036717	9830166G06Rik		ILMN_1249029	004570537	S	928	TAGACCCCAAGTCACAGTGGCGAAGCAAGATCCTCCTGGGCTTGAACTTC										
Mus musculus	Riken	ILMN_203068	ILMN_203068	C330023D02RIK	ri|C330023D02|PX00076F16|AK049320|1868					AK049320	C330023D02Rik		ILMN_1213636	006100673	S	1813	GATAAGCCCCCGCCCAGGATGCCCCATGCTTGCAGAAACAGATGTGGACA										
Mus musculus	RefSeq	ILMN_191331	ILMN_236479	CAMTA1	NM_001081557.1	NM_001081557.1		100072	125719158	NM_001081557.1	Camta1	NP_001075026.1	ILMN_2481026	006280601	S	8184	TGGCGCCCAACGGGGGGTCCCTGAGACTTGCATGTAAAACTAGTCTAGAT	4	-	150433824-150433873	4qE2	Mus musculus calmodulin binding transcription activator 1 (Camta1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0833; 1810059M14Rik; AW987475; KIAA0833; AI316882; 2310058O09Rik	mKIAA0833; 1810059M14Rik; AW987475; KIAA0833; AI316882; 2310058O09Rik
Mus musculus	RefSeq	ILMN_191331	ILMN_236479	CAMTA1	NM_001081557.1	NM_001081557.1		100072	125719158	NM_001081557.1	Camta1	NP_001075026.1	ILMN_2478202	002360221	S	136	GTGTATTCTGCGGAACTAGCACCTACTGTGTTCTCAACACCGTGCCACCT	4	-	151209929-151209978	4qE2	Mus musculus calmodulin binding transcription activator 1 (Camta1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0833; 1810059M14Rik; AW987475; KIAA0833; AI316882; 2310058O09Rik	mKIAA0833; 1810059M14Rik; AW987475; KIAA0833; AI316882; 2310058O09Rik
Mus musculus	RefSeq	ILMN_221379	ILMN_231724	MRPL44	NM_001081210.1	NM_001081210.1		69163	124487074	NM_001081210.1	Mrpl44	NP_001074679.1	ILMN_1227033	004760601	S	875	GAGTCTCGACTCACCAGGCAGTCTGGAAGCACAACTGCTCTGCCTTTATA	1	+	79776174-79776223	1qC4	Mus musculus mitochondrial ribosomal protein L44 (Mrpl44), nuclear gene encoding mitochondrial protein, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt [goid 4525] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	AI463302; 1810030E18Rik; 5730593H20Rik	AI463302; 1810030E18Rik; 5730593H20Rik
Mus musculus	MEEBO	ILMN_218637	ILMN_218637	4933437N03RIK	scl25362.3.1_157				21313311	NM_025765	4933437N03Rik		ILMN_2774580	006520411	S	992	AGGGGACGGAAAGAACAAGCCACTGCTGAGTGCGTGGGGGACCTGTTTCT										
Mus musculus	RefSeq	ILMN_213970	ILMN_249316	ELOVL1	NM_001039175.1	NM_001039175.1		54325	85702350	NM_001039175.1	Elovl1	NP_001034264.1	ILMN_1224780	007380068	S	72	TCCGGCCCTGATCCCTTTGAACCCTTCACTGCTGCCCGCCTGGTTTCCAC	4	+	118100769-118100818	4qD2.1	Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 (Elovl1), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]		AA407424; BB151133; Ssc1	AA407424; BB151133; Ssc1
Mus musculus	RefSeq	ILMN_213970	ILMN_249316	ELOVL1	NM_001039175.1	NM_001039175.1		54325	85702350	NM_001039175.1	Elovl1	NP_001034264.1	ILMN_2723491	005260474	S	1050	TGCCTTAAACTTGGGAGAGGAACACTCAGGGCTGGCCGGCACGCACCCGG	4	+	118104988-118105037	4qD2.1	Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 (Elovl1), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]		AA407424; BB151133; Ssc1	AA407424; BB151133; Ssc1
Mus musculus	RefSeq	ILMN_217700	ILMN_217700	DDR2	NM_022563.1	NM_022563.1		18214	13937362	NM_022563.1	Ddr2	NP_072075.1	ILMN_1230373	003710180	S	3006	TCCAGGAAATACACCTCCTGCTTCTTCAGCAAGGAGCCGAGTGATGATGC	1	-	171907970-171907985:171907986-171908019	1qH3	Mus musculus discoidin domain receptor family, member 2 (Ddr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	tyro10; Ntrkr3; AW495251	tyro10; Ntrkr3; AW495251
Mus musculus	Riken	ILMN_203388	ILMN_203388	4932443E23RIK	ri|4932443E23|PX00019K17|AK030118|4102					AK030118	4932443E23Rik		ILMN_2556921	007000072	S	3440	GCCTAGAATCACTGGCCTTCTGCCTCAGCTTCCAATTATAGGTATGTGCC										
Mus musculus	RefSeq	ILMN_216674	ILMN_216674	APON	NM_133996.3	NM_133996.3		28194	60499026	NM_133996.3	Apon	NP_598757.1	ILMN_1214548	007400376	S	1083	CTTCAGTCTTTCAGTTTCTAAATGCTATGGGTATTGCAATTTCCCTCTTT	10	+	127692422-127692471	10qD3	Mus musculus apolipoprotein N (Apon), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]			D10Ucla2; AI195275; MGC37850	D10Ucla2; AI195275; MGC37850
Mus musculus	MEEBO	ILMN_224092	ILMN_224092	2610020O08RIK	scl54990.9_78				31541902	NM_025937	2610020O08Rik		ILMN_2774618	006370563	S	3872	GCAGTGAGGTCATCTGACAGTAGAAGAGATCTATGGGTAGTGGAGCCCTT										
Mus musculus	RefSeq	ILMN_213335	ILMN_226122	LOC633568	XM_001001323.1	XM_001001323.1		633568	94393191	XM_001001323.1	LOC633568	XP_001001323.1	ILMN_1235244	001190079	S	329	GCACCTACTATCTGGACTCCTTGAAGAGCCGTTTCATCATCTCGAGAGAC	12	-	114286410-114286459	12qF1	PREDICTED: Mus musculus similar to Ig heavy chain V region 5-84 precursor (LOC633568), mRNA.					
Mus musculus	RefSeq	ILMN_219680	ILMN_240474	A430035B10RIK	XM_489125.3	XM_489125.3		320312	94377037	XM_489125.3	A430035B10Rik	XP_489125.1	ILMN_1258316	002340368	S	1193	GAAACAGGAACCATATGATGCCTTTCTTATTCTACTCTAAGAAAGCAATG	6	-	8440040-8440089	6qA1	PREDICTED: Mus musculus RIKEN cDNA A430035B10 gene, transcript variant 1 (A430035B10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_185500	ILMN_231189	LOC668030	XM_001004301.1	XM_001004301.1		668030	94367714	XM_001004301.1	LOC668030	XP_001004301.1	ILMN_2427542	000460022	S	1255	CTTTTATAGAAAAAGTATGTTATAAATGTGAGCCAGATAATCAATACTGT	2	+	175649793-175649842	2qH4	PREDICTED: Mus musculus similar to gonadotropin inducible ovarian transcription factor 1, transcript variant 5 (LOC668030), mRNA.					
Mus musculus	RefSeq	ILMN_186636	ILMN_252787	CCDC80	NM_026439.2	NM_026439.2		67896	110625751	NM_026439.2	Ccdc80	NP_080715.2	ILMN_1234824	005810538	S	3106	CTGGGGATGCGCTGCCCAGAAGATGAGTATGCAGGATATGGTTACCATAG	16	+	45127495-45127544	16qB5	Mus musculus coiled-coil domain containing 80 (Ccdc80), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			2610001E17Rik; Ssg1; Urb	2610001E17Rik; Ssg1; Urb
Mus musculus	RefSeq	ILMN_213842	ILMN_232797	A830023I12RIK	XM_985287.2	XM_985287.2		320875	149254344	XM_985287.2	A830023I12Rik	XP_990381.1	ILMN_1232072	007200630	S	29	GTCATGACATCTTGAGTTCCTTAAATATAGCGGAAGATGACAGAATCAAG					PREDICTED: Mus musculus RIKEN cDNA A830023I12 gene (A830023I12Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211282	ILMN_211282	OLFR430	scl14322.1.1_227	NM_146718.1			22129404	NM_146718.1	Olfr430		ILMN_2614255	005900477	S	745	CATTGACTCTTGACCGCACTCTAGCCGTAGTCTACTCTGTGCTAACACCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_211547	ILMN_211547	NXT1	NM_019761.5	NM_019761.5		56488	141803395	NM_019761.5	Nxt1	NP_062735.3	ILMN_1234152	001850091	S	98	AAGAGGAGAACAGGAGAGAAACTCTTCTGGCCCGGGACCGCGACCGGGGC	2	+	148498475-148498524	2qG3	Mus musculus NTF2-related export protein 1 (Nxt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of RNA from the nucleus to the cytoplasm [goid 6405] [evidence IDA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [evidence IDA]	1110001N02Rik	1110001N02Rik
Mus musculus	RefSeq	ILMN_193577	ILMN_215169	PTRF	NM_008986.2	NM_008986.2		19285	71043973	NM_008986.2	Ptrf	NP_033012.1	ILMN_2498471	006450240	S	2894	CCTCACCTACATGTATTCCCTGCTTCTTAGAATTGTAGCTCATTGATATT	11	-	100818324-100818373	11qD	Mus musculus polymerase I and transcript release factor (Ptrf), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which transcription is completed; the formation of phosphodiester bonds ceases, the RNA-DNA hybrid dissociates, and RNA polymerase releases the DNA [goid 6353] [evidence IEA];  [goid 6361] [evidence IDA]	Any activity that brings about termination of transcription by RNA polymerase I [goid 3716] [evidence IDA]; Interacting selectively with an unprocessed ribosomal RNA transcript [goid 42134] [evidence IDA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC118550; AW546441; 2310075E07Rik	MGC118550; AW546441; 2310075E07Rik
Mus musculus	RefSeq	ILMN_211635	ILMN_211635	ANXA7	NM_009674.2	NM_009674.2		11750	142352931	NM_009674.2	Anxa7	NP_033804.1	ILMN_2617956	004780273	S	2547	TTTAATTTTAAGATAAATGTTTAAACAGTAAGTTTGGTCCTGTGACTTTA	14	-	21274534-21274583	14qA3	Mus musculus annexin A7 (Anxa7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of water within a cell [goid 9992] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment [goid 9651] [evidence IMP]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IMP]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Anx7; synexin; AI316497; AI265384	Anx7; synexin; AI316497; AI265384
Mus musculus	RefSeq	ILMN_214413	ILMN_214413	CCL11	NM_011330.2	NM_011330.2		20292	141802451	NM_011330.2	Ccl11	NP_035460.1	ILMN_2647757	006060520	S	335	CATAAACAACCTCCTCTCTTGACACTAACCCAGAGCCTAAGAACTGCTTG	11	+	81875809-81875813:81875814-81875858	11qC	Mus musculus small chemokine (C-C motif) ligand 11 (Ccl11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	eotaxin; Scya11	eotaxin; Scya11
Mus musculus	RefSeq	ILMN_194975	ILMN_254676	A330050F15RIK	XM_923953.2	XM_923953.2		320722	94403089	XM_923953.2	A330050F15Rik	XP_929046.1	ILMN_2511412	005130402	S	165	TCTAGAAACCCAAGGGTGTAGCGGCTGAAGGAAGTCATGGTGTTCGCTCC				17qE1.3	PREDICTED: Mus musculus RIKEN cDNA A330050F15 gene (A330050F15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210324	ILMN_236345	SIRT4	XM_988059.1	XM_988059.1		75387	94375333	XM_988059.1	Sirt4	XP_993153.1	ILMN_1259494	002060707	S	1437	GGACCAGGCAGAAGTCAGTAAACCACAACTGTCTATGAGGGGCAACGTGG				5qF	PREDICTED: Mus musculus sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae) (Sirt4), mRNA.	Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218688	ILMN_251053	ARRB1	NM_177231.2	NM_177231.2		109689	79750059	NM_177231.2	Arrb1	NP_796205.1	ILMN_2753077	000620575	S	3777	AGGCTTCCTACACGTCAGCATCCACATTCTTTCCGTTTATCCCACAGATC	7	+	106751946-106751995	7qE2	Mus musculus arrestin, beta 1 (Arrb1), transcript variant a, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1200006I17Rik; AW208571; MGC124269; MGC124270; G430100A01Rik	1200006I17Rik; AW208571; MGC124269; MGC124270; G430100A01Rik
Mus musculus	RefSeq	ILMN_218688	ILMN_251053	ARRB1	NM_177231.2	NM_177231.2		109689	79750059	NM_177231.2	Arrb1	NP_796205.1	ILMN_1233970	001340239	S	3687	CTGATACCAGACCCTTTAGCATTTGGACTAACCTCTCCTGTCCCCCATCC	7	+	106751856-106751905	7qE2	Mus musculus arrestin, beta 1 (Arrb1), transcript variant a, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1200006I17Rik; AW208571; MGC124269; MGC124270; G430100A01Rik	1200006I17Rik; AW208571; MGC124269; MGC124270; G430100A01Rik
Mus musculus	RefSeq	ILMN_218688	ILMN_251053	ARRB1	NM_177231.2	NM_177231.2		109689	79750059	NM_177231.2	Arrb1	NP_796205.1	ILMN_1229853	005670059	S	3153	TCATCTCCGTTTCTGTTCCTCTCTCTTAGTTCCACACTTGCCGGAGAAGG	7	+	106751322-106751371	7qE2	Mus musculus arrestin, beta 1 (Arrb1), transcript variant a, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1200006I17Rik; AW208571; MGC124269; MGC124270; G430100A01Rik	1200006I17Rik; AW208571; MGC124269; MGC124270; G430100A01Rik
Mus musculus	RefSeq	ILMN_218688	ILMN_251053	ARRB1	NM_177231.2	NM_177231.2		109689	79750059	NM_177231.2	Arrb1	NP_796205.1	ILMN_2698985	002600242	S	3708	TTTGGACTAACCTCTCCTGTCCCCCATCCTTAACTGATACGAGCAAAAGG	7	+	106751877-106751926	7qE2	Mus musculus arrestin, beta 1 (Arrb1), transcript variant a, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1200006I17Rik; AW208571; MGC124269; MGC124270; G430100A01Rik	1200006I17Rik; AW208571; MGC124269; MGC124270; G430100A01Rik
Mus musculus	RefSeq	ILMN_198113	ILMN_252143	KSR2	XM_992480.1	XM_992480.1		333050	94376738	XM_992480.1	Ksr2	XP_997574.1	ILMN_1222938	004220110	S	2316	AACCAGGCAGATCGCGCAAGAGATTGTAAAGGGCATGGGCTACCTCCACG				5qF	PREDICTED: Mus musculus kinase suppressor of ras 2 (Ksr2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_206240	ILMN_237018	CLASP1	XM_922019.2	XM_922019.2		76707	94364134	XM_922019.2	Clasp1	XP_927112.1	ILMN_1230864	004120731	S	1970	CTCTCAGGGCACATGTCTGTGGGGTCACCTCTAGCTGGTTTCCAAGACCC				1qE2.3	PREDICTED: Mus musculus CLIP associating protein 1, transcript variant 23 (Clasp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196665	ILMN_196665	BC020108	XM_128891.4	XM_128891.4			38083901	XM_128891.4	BC020108		ILMN_1244943	004040307	S	1744	CCCGATGTAGTCCGCACCCTTCTGGCTCGCCTGGCTGATTATAACCGTAC										
Mus musculus	Riken	ILMN_205866	ILMN_205866	B930096N04RIK	ri|B930096N04|PX00166H08|AK047599|2421					AK047599	B930096N04Rik		ILMN_2575811	004050278	S	974	GTGAGTTTTGCCTGTTGTAGATGCCTGTGTCCCCGAAGCCTCAGTCACTG										
Mus musculus	RefSeq	ILMN_223378	ILMN_223378	FOXN4	NM_148935.2	NM_148935.2		116810	91598890	NM_148935.2	Foxn4	NP_683737.2	ILMN_1248018	000060136	S	2779	ATCAGGGGCCATCTTTCAGGTCTCCCCACTGAGACAGTGCAGCCCAGCCC	5	-	114704314-114704363	5qF	Mus musculus forkhead box N4 (Foxn4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216928	ILMN_216928	ARHGEF16	XM_149562.8	XM_149562.8		230972	94373013	XM_149562.8	Arhgef16	XP_149562.6	ILMN_1239332	004850719	S	1700	AGCCCTTCCCCTGGGCTCACGGTTGAGTGCAGAACACTGAACATCTATAG				4qE2	PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 16, transcript variant 1 (Arhgef16), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_199991	ILMN_318069	LOC100039045	XR_030559.1	XR_030559.1		100039045	149253815	XR_030559.1	LOC100039045		ILMN_1233232	001450754	S	77	TTCAGAGAGCCAATGTGGATGGGAGAGACCAGAGAGGGGAGGAAGGACGC	5	-	26415680-26415729	5qB1	PREDICTED: Mus musculus hypothetical protein LOC100039045 (LOC100039045), misc RNA.					
Mus musculus	Riken	ILMN_202597	ILMN_202597	AFG3L1	ri|E430005H05|PX00097K16|AK088172|1281					AK088172	Afg3l1		ILMN_2550822	004730139	S	852	TATTGAGTCTGGCTGTGTTTGCAGGTCAGCAAGCCCCAGGGATCCTCCCG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198373	ILMN_198373	KCNG2	XM_140499.7	XM_140499.7		240444	94405073	XM_140499.7	Kcng2	XP_140499.6	ILMN_1216698	003870128	S	1339	ACGCGTGATGACAGTACACGTTCGGCCAGCGCCACTGAGGACAGCTCTCA	18	-	80492422-80492471	18qE3	PREDICTED: Mus musculus potassium voltage-gated channel, subfamily G, member 2 (Kcng2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200649	ILMN_198373	KCNG2	XM_140499.7	XM_140499.7		240444	94405073	XM_140499.7	Kcng2	XP_140499.6	ILMN_1216676	006060722	S	226	TACGACGTGAGCCGCGACGAGTTCTTCTTCGACCGCAGCCCGTGCGCTTT	18	-	80519599-80519648	18qE3	PREDICTED: Mus musculus potassium voltage-gated channel, subfamily G, member 2 (Kcng2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218837	ILMN_218837	ARRB2	NM_145429.4	NM_145429.4		216869	146149233	NM_145429.4	Arrb2	NP_663404.1	ILMN_2700848	001110451	S	1255	GCCCGGCTCCGGCTGAAGGGAATGAAGGATGATGACTGTGATGACCAGTT				11qB3	Mus musculus arrestin, beta 2 (Arrb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IGI]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RP23-42P20.7; AI326910; AW122872	RP23-42P20.7; AI326910; AW122872
Mus musculus	RefSeq	ILMN_198486	ILMN_244428	LOC269859	XR_001705.1	XR_001705.1		269859	94379338	XR_001705.1	LOC269859		ILMN_1252133	004220551	S	279	GTTGCCGTATTGCTGTCCATTGTGTTGCACGCCTTGGCAGAGCTCCAGTA	7	-	5625927-5625976	7qA1	PREDICTED: Mus musculus similar to protein tyrosine phosphatase 4a1 (LOC269859), mRNA.					
Mus musculus	RefSeq	ILMN_208898	ILMN_208898	IL1RAPL2	NM_030688.1	NM_030688.1		60367	13507615	NM_030688.1	Il1rapl2	NP_109613.1	ILMN_2590585	000840402	S	2233	TTTCGGCTACAGTGAGAATAAATTACACCTAAAAACATTAAGGTGCTGAA	X	+	135381222-135381271	XqF1	Mus musculus interleukin 1 receptor accessory protein-like 2 (Il1rapl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4910] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194031	ILMN_252618	VILL	NM_011700.1	NM_011700.1		22351	23956063	NM_011700.1	Vill	NP_035830.1	ILMN_2511391	003450615	S	1129	GGAAACCTGGAGGTAGGCAAGCTTCACACCCAGCCTGAGCTCGCGGCCCA	9	+	118972734-118972783	9qF3	Mus musculus villin-like (Vill), mRNA.		The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Villp	Villp
Mus musculus	RefSeq	ILMN_252618	ILMN_252618	VILL	NM_011700.1	NM_011700.1		22351	23956063	NM_011700.1	Vill	NP_035830.1	ILMN_2846432	005690202	S	2138	ACACCAGCAGCTGCAGTGACTCAATGGTCAATGGGAGCCTGCCCCGGGAA	9	+	118979823-118979872	9qF3	Mus musculus villin-like (Vill), mRNA.		The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Villp	Villp
Mus musculus	RefSeq	ILMN_260301	ILMN_260301	OLFR1510	NM_146431.1	NM_146431.1		258423	33239055	NM_146431.1	Olfr1510	NP_666642.1	ILMN_2926076	002450725	S	493	ACCACTCTGACCTTCAGATTGCCCTACTGTGGGCCCAACCAAATAGATTA	14	-	53030003-53030052	14qC2	Mus musculus olfactory receptor 1510 (Olfr1510), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC123810; MOR223-6	MGC123810; MOR223-6
Mus musculus	MEEBO	ILMN_224272	ILMN_224272	NTE	scl34136.35.1_121				7657400	NM_015801	Nte		ILMN_2777668	001240148	S	4252	GGGGAGCTCACACTATTATTCCCACTGCTGCTATACTTCAACACTCCCTG										
Mus musculus	MEEBO	ILMN_185712	ILMN_185712	MDM4	scl16292.14_505				31543244	NM_008575	Mdm4		ILMN_1257423	003840338	S	20	TCTTTGGCATGATTTGGGGAAGTGATTAAAAGTCATTGGCAGCTTTTCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197499	ILMN_225109	ZFHX2	NM_001039198.1	NM_001039198.1		239102	85986588	NM_001039198.1	Zfhx2	NP_001034287.1	ILMN_2528345	000240451	S	8507	CAGTCCAGCCTCCGGGGATCAGCGTTGCCCACCAATGGCAAATCCAAAGT	14	-	55680663-55680712	14qC3	Mus musculus zinc finger homeobox 2 (Zfhx2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	ZFH-5	ZFH-5
Mus musculus	RefSeq	ILMN_225109	ILMN_225109	ZFHX2	NM_001039198.1	NM_001039198.1		239102	85986588	NM_001039198.1	Zfhx2	NP_001034287.1	ILMN_2964785	006380634	S	8500	CTAAGGGCAGTCCAGCCTCCGGGGATCAGCGTTGCCCACCAATGGCAAAT	14	-	55680670-55680719	14qC3	Mus musculus zinc finger homeobox 2 (Zfhx2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	ZFH-5	ZFH-5
Mus musculus	RefSeq	ILMN_256243	ILMN_256243	7420426K07RIK	NM_001033983.2	NM_001033983.2		546157	141803508	NM_001033983.2	7420426K07Rik	NP_001029155.1	ILMN_3161102	006900431	S	1120	CCAGGTTGGTTCAAGCTGCTCTCCTCAAAAACTGACAATACCATAGGAGG	9	+	98804657-98804706	9qE3.3	Mus musculus RIKEN cDNA 7420426K07 gene (7420426K07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218782	ILMN_237955	JMJD1C	XM_975833.2	XM_975833.2		108829	149260923	XM_975833.2	Jmjd1c	XP_980927.2	ILMN_1258815	005130241	S	7779	CTATATAGCTGTTCCTGTATCATAGTGTATATGATGTTTGTGAAGATGCC	10	+	66718471-66718520	10qB5.1	PREDICTED: Mus musculus jumonji domain containing 1C (Jmjd1c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214208	ILMN_214208	MSI2H	scl39740.21_10				54262152	NM_054043	Msi2h		ILMN_2684651	000770450	S	2138	CACACTGAATCGAAGTTGTGATACGCGGAGCGGGAGGTGGGCATAGACTC										
Mus musculus	RefSeq	ILMN_218946	ILMN_218946	CRYGS	NM_009967.1	NM_009967.1		12970	6753531	NM_009967.1	Crygs	NP_034097.1	ILMN_2702266	001450593	S	447	GGTAGAAGGCACCTGGATTTTCTATGAGCTACCCAACTACCGTGGCAGAC	16	-	22805483-22805532	16qB1	Mus musculus crystallin, gamma S (Crygs), mRNA.		The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IMP]	AI327013; Opj; rncat	AI327013; Opj; rncat
Mus musculus	RefSeq	ILMN_196051	ILMN_245011	PIGY	NM_025574.3	NM_025574.3		66459	133930791	NM_025574.3	Pigy	NP_079850.1	ILMN_2521182	001440059	S	5324	GACACCTTATATTTTAGTTTGTTACATTATATTATGATTGCCTGCTTTTT	6	-	57634769-57634818	6qB3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class Y (Pigy), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]; An enzyme complex that catalyzes the transfer of GlcNAc from UDP-GlcNAc to an acceptor phosphatidylinositol, the first step in the production of GPI anchors for cell surface proteins. The complex contains PIG-A, PIG-C, PIG-H, PIG-Q, PIG-P, and DPM2 in human, and Eri1p, Gpi1p, Gpi2p, Gpi15p, Gpi19p, and Spt14p in budding yeast [goid 506] [evidence ISA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISA]		2610022G08Rik; Prey; AI847956	2610022G08Rik; Prey; AI847956
Mus musculus	RefSeq	ILMN_196051	ILMN_245011	PIGY	NM_025574.3	NM_025574.3		66459	133930791	NM_025574.3	Pigy	NP_079850.1	ILMN_2629610	006660253	S	3238	GTTTTCTGTGAGTCTGAATAAACTCTCAAGGGAACAGGACCCTTTCCCAA	6	-	57636855-57636904	6qB3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class Y (Pigy), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]; An enzyme complex that catalyzes the transfer of GlcNAc from UDP-GlcNAc to an acceptor phosphatidylinositol, the first step in the production of GPI anchors for cell surface proteins. The complex contains PIG-A, PIG-C, PIG-H, PIG-Q, PIG-P, and DPM2 in human, and Eri1p, Gpi1p, Gpi2p, Gpi15p, Gpi19p, and Spt14p in budding yeast [goid 506] [evidence ISA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISA]		2610022G08Rik; Prey; AI847956	2610022G08Rik; Prey; AI847956
Mus musculus	RefSeq	ILMN_221707	ILMN_227907	LOC635963	XM_974002.1	XM_974002.1		635963	94419540	XM_974002.1	LOC635963	XP_979096.1	ILMN_1224679	002000609	S	93	CAGCCTTGGAGATCAAGCATCTATCTCTTGCTCATCAAGTCAGAGCCTTG					PREDICTED: Mus musculus similar to Ig kappa chain V-II region 26-10 (LOC635963), mRNA.					
Mus musculus	MEEBO	ILMN_188597	ILMN_188597	KCNQ1	scl31852.1.1_22				6680545	NM_008434	Kcnq1		ILMN_1237984	001500709	S	9	GGAGGCCACACAGACAAGCTCAGGCCCAGATGTCCCATTTTATAGCTGTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IMP]; Any mechanism, at the level of transcription or post-transcription, causing long-term gene inactivation [goid 16458] [evidence IMP]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185914	ILMN_185914	ZFP119	NM_144546.5	NM_144546.5		104349	148747384	NM_144546.5	Zfp119	NP_653129.1	ILMN_2431067	002710538	S	1643	CAGTACTCTTCAAGAGCACAAAAGAATTCATACTGACAAAATCCCCAAGG				17qD	Mus musculus zinc finger protein 119 (Zfp119), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mzf13; AL024077	Mzf13; AL024077
Mus musculus	RefSeq	ILMN_221033	ILMN_221033	PNRC2	NM_026383.1	NM_026383.1		52830	13385875	NM_026383.1	Pnrc2	NP_080659.1	ILMN_2861331	002850441	S	1204	GCTGACTAGCACCCCACAAAGCTGCTAAAGTGATCCTGGCCTCACCTATA	4	-	135143636-135143685	4qD3	Mus musculus proline-rich nuclear receptor coactivator 2 (Pnrc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MGC11707; D4Bwg0593e; 0610011E17Rik	MGC11707; D4Bwg0593e; 0610011E17Rik
Mus musculus	RefSeq	ILMN_221033	ILMN_221033	PNRC2	NM_026383.1	NM_026383.1		52830	13385875	NM_026383.1	Pnrc2	NP_080659.1	ILMN_2861335	004260142	S	1798	CAGAGCAAGAGTTCAAGTCAAACATTGAGTATCCTAAAGGACAAGTTCAC	4	-	135143042-135143091	4qD3	Mus musculus proline-rich nuclear receptor coactivator 2 (Pnrc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MGC11707; D4Bwg0593e; 0610011E17Rik	MGC11707; D4Bwg0593e; 0610011E17Rik
Mus musculus	RefSeq	ILMN_221570	ILMN_240181	D230004J03RIK	XM_914443.2	XM_914443.2		194388	94377727	XM_914443.2	D230004J03Rik	XP_919536.1	ILMN_2737328	007320112	S	4868	CGCTGGTCTTCTACCAACACAAGAACCTCAACCAGCCCAACCACGGGCTG				6qC3	PREDICTED: Mus musculus RIKEN cDNA D230004J03 gene (D230004J03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221570	ILMN_240181	D230004J03RIK	XM_914443.2	XM_914443.2		194388	94377727	XM_914443.2	D230004J03Rik	XP_919536.1	ILMN_1223556	006450274	S	4852	CACCCCACCCGCATCTCGCTGGTCTTCTACCAACACAAGAACCTCAACCA				6qC3	PREDICTED: Mus musculus RIKEN cDNA D230004J03 gene (D230004J03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221096	ILMN_240181	D230004J03RIK	XM_914443.2	XM_914443.2		194388	94377727	XM_914443.2	D230004J03Rik	XP_919536.1	ILMN_2731048	001770075	S	2180	CCCTCAGTGGCTTCTTGGAGTCACCTCTAAAGTACCTAGACACACCTACT				6qC3	PREDICTED: Mus musculus RIKEN cDNA D230004J03 gene (D230004J03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_206417	ILMN_250954	SAMD3	NM_001013766.2	NM_001013766.2		268288	142366423	NM_001013766.2	Samd3	NP_001013788.2	ILMN_1215680	002760358	S	1915	CTAATGTGACAGGAAACCCCACAGCTGCTCGCCTATCCACCGCCATCTGA	10	+	25979905-25979954	10qA4	Mus musculus sterile alpha motif domain containing 3 (Samd3), transcript variant 1, mRNA. XM_919386				Gm623	Gm623
Mus musculus	MEEBO	ILMN_186337	ILMN_186337	5530401N12RIK	scl071377.1_15						5530401N12Rik		ILMN_2434685	003190575	S	20	CGGCTACCCTTGTGGGTCGAATCTCAGCGCTGTCAGTGTTCTCGAGGAAA										
Mus musculus	RefSeq	ILMN_188985	ILMN_247827	TRUB1	NM_028115.2	NM_028115.2		72133	27754011	NM_028115.2	Trub1	NP_082391.1	ILMN_1240735	001660541	S	1344	GAAGTGTTCAGTGTCGAGCTGTCCTGTGTGTTTGCAGAGCCTATGGCTGC	19	+	57563066-57563115	19qD2	Mus musculus TruB pseudouridine (psi) synthase homolog 1 (E. coli) (Trub1), transcript variant 1, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine in a tRNA molecule [goid 31119] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]	2610009I02Rik; 9030425C13Rik; C76870; MGC107612; BB118943; AI448235	2610009I02Rik; 9030425C13Rik; C76870; MGC107612; BB118943; AI448235
Mus musculus	RefSeq	ILMN_188985	ILMN_247827	TRUB1	NM_028115.2	NM_028115.2		72133	27754011	NM_028115.2	Trub1	NP_082391.1	ILMN_2654568	002630743	S	1340	ATTTGAAGTGTTCAGTGTCGAGCTGTCCTGTGTGTTTGCAGAGCCTATGG	19	+	57563062-57563111	19qD2	Mus musculus TruB pseudouridine (psi) synthase homolog 1 (E. coli) (Trub1), transcript variant 1, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine in a tRNA molecule [goid 31119] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]	2610009I02Rik; 9030425C13Rik; C76870; MGC107612; BB118943; AI448235	2610009I02Rik; 9030425C13Rik; C76870; MGC107612; BB118943; AI448235
Mus musculus	RefSeq	ILMN_248615	ILMN_248615	JMJD1A	NM_173001.1	NM_173001.1		104263	84662716	NM_173001.1	Jmjd1a	NP_766589.1	ILMN_3118169	003060672	A	3697	GGGTCAAGACAACCCTGCAGACCATGACCCTATCCACGATCAGAGCTGGT	6	-	71540764-71540813	6qC1	Mus musculus jumonji domain containing 1A (Jmjd1a), transcript variant 1, mRNA. XM_895834 XM_895843 XM_895849 XM_895856 XM_895859 XM_895866 XM_895873 XM_909665 XM_921390 XM_921393 XM_921399 XM_921405 XM_921412 XM_921421 XM_921426 XM_921433 XM_921440 XM_921445 XM_921451	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Jmjd1; Tsga; 1700105C21Rik; TGSA; C230043E16Rik; mKIAA0742	Jmjd1; Tsga; 1700105C21Rik; TGSA; C230043E16Rik; mKIAA0742
Mus musculus	RefSeq	ILMN_198369	ILMN_248615	JMJD1A	NM_173001.1	NM_173001.1		104263	84662716	NM_173001.1	Jmjd1a	NP_766589.1	ILMN_2707895	006660470	S	4268	GACCACGCATCCTTATACTGTGACTTCACCTAGATCTTCTACCAAGCTGA	6	-	71539386-71539435	6qC1	Mus musculus jumonji domain containing 1A (Jmjd1a), transcript variant 1, mRNA. XM_895834 XM_895843 XM_895849 XM_895856 XM_895859 XM_895866 XM_895873 XM_909665 XM_921390 XM_921393 XM_921399 XM_921405 XM_921412 XM_921421 XM_921426 XM_921433 XM_921440 XM_921445 XM_921451	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Jmjd1; Tsga; 1700105C21Rik; TGSA; C230043E16Rik; mKIAA0742	Jmjd1; Tsga; 1700105C21Rik; TGSA; C230043E16Rik; mKIAA0742
Mus musculus	RefSeq	ILMN_248615	ILMN_248615	JMJD1A	NM_173001.1	NM_173001.1		104263	84662716	NM_173001.1	Jmjd1a	NP_766589.1	ILMN_3043245	005490646	I	4444	TTCAGAGCACCCTCCCCCACCCACTAGGGTCCAGAAGAGCAATGGAGGAA	6	-	71539210-71539259	6qC1	Mus musculus jumonji domain containing 1A (Jmjd1a), transcript variant 1, mRNA. XM_895834 XM_895843 XM_895849 XM_895856 XM_895859 XM_895866 XM_895873 XM_909665 XM_921390 XM_921393 XM_921399 XM_921405 XM_921412 XM_921421 XM_921426 XM_921433 XM_921440 XM_921445 XM_921451	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Jmjd1; Tsga; 1700105C21Rik; TGSA; C230043E16Rik; mKIAA0742	Jmjd1; Tsga; 1700105C21Rik; TGSA; C230043E16Rik; mKIAA0742
Mus musculus	RefSeq	ILMN_218384	ILMN_218384	SORCS2	NM_030889.2	NM_030889.2		81840	124301216	NM_030889.2	Sorcs2	NP_112151.2	ILMN_2695085	001690521	S	5221	TCCCCATCTGTATCCCCACAGCATGGAAGTACCACCCAGTACCACACAGA	5	-	36360280-36360329	5qB3	Mus musculus sortilin-related VPS10 domain containing receptor 2 (Sorcs2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	N28137; mKIAA1329	N28137; mKIAA1329
Mus musculus	RefSeq	ILMN_211460	ILMN_211460	DNAJC19	NM_026332.3	NM_026332.3		67713	71061476	NM_026332.3	Dnajc19	NP_080608.3	ILMN_2669585	007610068	S	436	GCAGCCAAAATCAATGAAGCTAAAGACTTACTAGAAGGACAAGCTAAAAA	3	-	33976379-33976428	3qA3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 19 (Dnajc19), transcript variant 1, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	1810055D05Rik; AA959924; Tim14	1810055D05Rik; AA959924; Tim14
Mus musculus	RefSeq	ILMN_211460	ILMN_211460	DNAJC19	NM_026332.3	NM_026332.3		67713	71061476	NM_026332.3	Dnajc19	NP_080608.3	ILMN_3068630	005260356	I	420	AGGATCTCCTTATATAGCAGCCAAAATCAATGAAGCTAAAGACTTACTAG	3	-	33976395-33976444	3qA3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 19 (Dnajc19), transcript variant 1, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	1810055D05Rik; AA959924; Tim14	1810055D05Rik; AA959924; Tim14
Mus musculus	RefSeq	ILMN_219975	ILMN_310677	LOC100042540	XM_001479038.1	XM_001479038.1		100042540	149253174	XM_001479038.1	LOC100042540	XP_001479088.1	ILMN_2715931	004880025	S	155	CAGCTTTAAGGCCTCAGCTACTCATGCGCACCACTTTTGGTTTAGGTCCA	4	-	136019691-136019740	4qD3	PREDICTED: Mus musculus hypothetical protein LOC100042540 (LOC100042540), mRNA.					
Mus musculus	RefSeq	ILMN_214501	ILMN_214501	OLFR195	NM_146998.1	NM_146998.1		259000	22128940	NM_146998.1	Olfr195	NP_667209.1	ILMN_1247436	006350243	S	568	ACTGATCCAAATATCAATGAACTGATATTACTTGTCTTGGCAGGTTCAAT	16	+	59149245-59149294	16qC1.3	Mus musculus olfactory receptor 195 (Olfr195), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR184-5	MOR184-5
Mus musculus	MEEBO	ILMN_217694	ILMN_217694	CBARA1	scl38886.15_179	NM_144822.1			21450200	NM_144822.1	Cbara1		ILMN_2686513	001230204	S	1922	GAATGATAATGCAGATGACCCTGGCACCCTGAGCTGGCAGGAAGCCTGGC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208905	ILMN_208905	HEATR3	NM_172757.3	NM_172757.3		234549	40789300	NM_172757.3	Heatr3	NP_766345.3	ILMN_2590644	000630240	S	329	TAGTGCAGCAGCGGCCCGCACTACCAGACTTAGCCCGTCGGGATGCTGTG	8	+	90662229-90662278	8qC3	Mus musculus HEAT repeat containing 3 (Heatr3), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C030036P15Rik	C030036P15Rik
Mus musculus	RefSeq	ILMN_208905	ILMN_208905	HEATR3	NM_172757.3	NM_172757.3		234549	40789300	NM_172757.3	Heatr3	NP_766345.3	ILMN_2688270	004480088	S	2013	AGCGGCTTTGAAAGAATTCCAACCAGTCTTCAAAATGAAGATACGGAAAG	8	+	90691032-90691071:90694758-90694767	8qC3	Mus musculus HEAT repeat containing 3 (Heatr3), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C030036P15Rik	C030036P15Rik
Mus musculus	RefSeq	ILMN_204242	ILMN_208905	HEATR3	NM_172757.3	NM_172757.3		234549	40789300	NM_172757.3	Heatr3	NP_766345.3	ILMN_2563476	001710246	S	145	TCTTACCCATGGCGACGGAGGCTGCAGTGACAGACCAGAAGAGGACGACT	8	+	90661928-90661977	8qC3	Mus musculus HEAT repeat containing 3 (Heatr3), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C030036P15Rik	C030036P15Rik
Mus musculus	RefSeq	ILMN_208905	ILMN_208905	HEATR3	NM_172757.3	NM_172757.3		234549	40789300	NM_172757.3	Heatr3	NP_766345.3	ILMN_2762616	003180088	S	1973	GCGAAGCAGCTGAAAAGGCTTCAGTTCAAATTAAATTGTTAGCGGCTTTG	8	+	90690992-90691041	8qC3	Mus musculus HEAT repeat containing 3 (Heatr3), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C030036P15Rik	C030036P15Rik
Mus musculus	RefSeq	ILMN_208905	ILMN_208905	HEATR3	NM_172757.3	NM_172757.3		234549	40789300	NM_172757.3	Heatr3	NP_766345.3	ILMN_3007728	006370678	S	3085	CCAACCTGGACTACAGATGGAGCACCAGGATAGCCAGAGAGACCCTGTCT	8	+	90695790-90695839	8qC3	Mus musculus HEAT repeat containing 3 (Heatr3), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C030036P15Rik	C030036P15Rik
Mus musculus	RefSeq	ILMN_235256	ILMN_235256	ZCRB1	NM_026025.1	NM_026025.1		67197	21313087	NM_026025.1	Zcrb1	NP_080301.1	ILMN_2791551	007320246	S	694	ACCCAGGGGGTCCCTCGACCTCAGATGATTCCAGACGACCAAGGATAAAG	15	-	93214375-93214424	15qE3	Mus musculus zinc finger CCHC-type and RNA binding motif 1 (Zcrb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Madp-1; 2700088M22Rik	Madp-1; 2700088M22Rik
Mus musculus	RefSeq	ILMN_209934	ILMN_209934	ABCC6	NM_018795.1	NM_018795.1		27421	9055155	NM_018795.1	Abcc6	NP_061265.1	ILMN_2934941	001050369	S	4680	GCCATGCCCACCCCAGGCCAAAGAGAATGGTAACTCTCAGCCCAAGCTGT	7	-	53231977-53232026	7qB4	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 6 (Abcc6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	Abcc1b; Mrp6	Abcc1b; Mrp6
Mus musculus	RefSeq	ILMN_212924	ILMN_212924	SUV39H2	NM_022724.3	NM_022724.3		64707	141801869	NM_022724.3	Suv39h2	NP_073561.2	ILMN_2655823	002340753	S	1525	AGTATTTGGGACTCCTTTCTATTACCTACATATTGTATTATATGATGTTA	2	-	3375771-3375820	2qA1	Mus musculus suppressor of variegation 3-9 homolog 2 (Drosophila) (Suv39h2), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IGI]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [pmid 11094092] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D030054H19Rik; D2Ertd544e; 4930507K23Rik; AA536750	D030054H19Rik; D2Ertd544e; 4930507K23Rik; AA536750
Mus musculus	RefSeq	ILMN_212924	ILMN_212924	SUV39H2	NM_022724.3	NM_022724.3		64707	141801869	NM_022724.3	Suv39h2	NP_073561.2	ILMN_2631691	007320438	S	3940	ATTTTGTGATGTATCTTGGCATTTTGAAATGTTTTTAACTTTGCTAATTT	2	-	3373356-3373405	2qA1	Mus musculus suppressor of variegation 3-9 homolog 2 (Drosophila) (Suv39h2), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IGI]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [pmid 11094092] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D030054H19Rik; D2Ertd544e; 4930507K23Rik; AA536750	D030054H19Rik; D2Ertd544e; 4930507K23Rik; AA536750
Mus musculus	RefSeq	ILMN_211562	ILMN_212924	SUV39H2	NM_022724.3	NM_022724.3		64707	141801869	NM_022724.3	Suv39h2	NP_073561.2	ILMN_2751824	000670612	S	1276	CTGGGCAGCCGAGTATCAAGGTTATCGATGAAAACACTAAACACCTGAAG	2	-	3377047-3377096	2qA1	Mus musculus suppressor of variegation 3-9 homolog 2 (Drosophila) (Suv39h2), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IGI]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [pmid 11094092] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D030054H19Rik; D2Ertd544e; 4930507K23Rik; AA536750	D030054H19Rik; D2Ertd544e; 4930507K23Rik; AA536750
Mus musculus	RefSeq	ILMN_216777	ILMN_216777	TALDO1	NM_011528.3	NM_011528.3		21351	146134505	NM_011528.3	Taldo1	NP_035658.1	ILMN_2675261	007150121	S	1020	AAGTAGTGCAACACCCGAGGCCCCAGTCCTGCACCGAGGCTGACCCCAGA				7qF5	Mus musculus transaldolase 1 (Taldo1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate [goid 4801] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188296	ILMN_188296	VPS54	NM_139061.3	NM_139061.3		245944	142375345	NM_139061.3	Vps54	NP_620692.2	ILMN_2451470	000990450	S	4129	GCCTGTGTCTCACACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATC	11	+	21220945-21220994	11qA3.1	Mus musculus vacuolar protein sorting 54 (yeast) (Vps54), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system [goid 50881] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5330404P15Rik; Vps54l; Hcc8; wr; mSLP8	5330404P15Rik; Vps54l; Hcc8; wr; mSLP8
Mus musculus	MEEBO	ILMN_186859	ILMN_186859	C130002N06	scl00328291.1_261						C130002N06		ILMN_2439102	001110358	S	2	GCAGCAAAGGCGTGTGCCTACAAAACCACCTTGTTGGCGCTGAAATGGAT										
Mus musculus	RefSeq	ILMN_188453	ILMN_259291	CLPB	NM_009191.3	NM_009191.3		20480	118130483	NM_009191.3	Clpb	NP_033217.1	ILMN_2681446	003710095	S	4265	GCCCATGTATTCTGTGGTTATGATGTAGTAGGAAGTGTGTTGCTCCGTGC	7	+	108938455-108938504	7qE3	Mus musculus ClpB caseinolytic peptidase B homolog (E. coli) (Clpb), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	AL118244; Skd3	AL118244; Skd3
Mus musculus	Riken	ILMN_207306	ILMN_207306	4833438J18RIK	ri|4833438J18|PX00638B20|AK076521|1966					AK076521	4833438J18Rik		ILMN_2586607	005090551	S	1587	CTAGAGATGGATGCTTGTCTTGACTTCCTCCTGATGACAGCCCTCTTCCC										
Mus musculus	RefSeq	ILMN_238586	ILMN_238586	CCDC64	NM_001080808.1	NM_001080808.1		75665	124248513	NM_001080808.1	Ccdc64	NP_001074277.1	ILMN_2847304	003130364	S	1768	CTAGTGGCAGTCTGAAAAGGTTCCCCCTTAGCTGGAGCAGGGCAGCCACA	5	-	116099330-116099379	5qF	Mus musculus coiled-coil domain containing 64 (Ccdc64), mRNA.				2210403N09Rik; MGC143541	2210403N09Rik; MGC143541
Mus musculus	RefSeq	ILMN_219336	ILMN_219336	LOX	NM_010728.1	NM_010728.1		16948	6754567	NM_010728.1	Lox	NP_034858.1	ILMN_2997494	001410543	S	4191	GCAGACTCCATCTTCAGTGGGACCGTGGTCTAGCTTTCCTAGTTCCAGGA	18	-	52676250-52676299	18qD1	Mus musculus lysyl oxidase (Lox), mRNA.	Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence ISO]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + H2O2 [goid 4720] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TSC-160; AI893619	TSC-160; AI893619
Mus musculus	RefSeq	ILMN_215280	ILMN_215280	SGCG	NM_011892.3	NM_011892.3		24053	125490359	NM_011892.3	Sgcg	NP_036022.1	ILMN_2657543	002600408	S	1032	TGCCTCTTCGGCAGCACACGTACAATGTCTTGGTGAGACGACGGCTGTGG	14	-	61840385-61840434	14qD1	Mus musculus sarcoglycan, gamma (dystrophin-associated glycoprotein) (Sgcg), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5430420E18Rik; 35kDa; gamma-SG; AI642964	5430420E18Rik; 35kDa; gamma-SG; AI642964
Mus musculus	RefSeq	ILMN_220003	ILMN_220003	ARF3	NM_007478.3	NM_007478.3		11842	118131061	NM_007478.3	Arf3	NP_031504.1	ILMN_1252195	005570280	S	2956	AGTTCCAGATAGGTTTTGTACATTGCAGACATGAGTCCACTCCTGCACCC	15	-	98568532-98568581	15qF1	Mus musculus ADP-ribosylation factor 3 (Arf3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence TAS]	AI854770; 5430400P17Rik	AI854770; 5430400P17Rik
Mus musculus	RefSeq	ILMN_211177	ILMN_211177	OCIAD1	NM_023429.3	NM_023429.3		68095	142356968	NM_023429.3	Ociad1	NP_075918.1	ILMN_1237183	004570541	S	771	GGAGTAAGAACAGAGAGTCCTATGGAGTAACTTTACCCCACAAGACTGAC	5	+	73701572-73701621	5qC3.2	Mus musculus OCIA domain containing 1 (Ociad1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TPA018; AI481327; 6030432N09Rik; B230209J16Rik; BB021357; Asrij; OCIA; AW557942	TPA018; AI481327; 6030432N09Rik; B230209J16Rik; BB021357; Asrij; OCIA; AW557942
Mus musculus	RefSeq	ILMN_211177	ILMN_211177	OCIAD1	NM_023429.3	NM_023429.3		68095	142356968	NM_023429.3	Ociad1	NP_075918.1	ILMN_1225390	004610246	S	938	TCCATATCCAGCTTCATCCAGGTGTCGTTTGTACCTACATGCTTGGACTC	5	+	73704755-73704804	5qC3.2	Mus musculus OCIA domain containing 1 (Ociad1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TPA018; AI481327; 6030432N09Rik; B230209J16Rik; BB021357; Asrij; OCIA; AW557942	TPA018; AI481327; 6030432N09Rik; B230209J16Rik; BB021357; Asrij; OCIA; AW557942
Mus musculus	RefSeq	ILMN_208994	ILMN_208994	CD207	NM_144943.2	NM_144943.2		246278	31560763	NM_144943.2	Cd207	NP_659192.2	ILMN_2785648	005690056	S	1167	AATTGTCCCAAACACAGCCTGTGGTCTTTCTGTCTTGGCTGGCAGTTCTC	6	-	83621514-83621563	6qC3	Mus musculus CD207 antigen (Cd207), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IDA]	Langerin	Langerin
Mus musculus	RefSeq	ILMN_208994	ILMN_208994	CD207	NM_144943.2	NM_144943.2		246278	31560763	NM_144943.2	Cd207	NP_659192.2	ILMN_2591543	007560255	S	1027	GAGGCCCTACGTCCAAACAACTGAATGACAGATCTGGCCTGAGCTCGGCA	6	-	83621654-83621676:83621677-83621703	6qC3	Mus musculus CD207 antigen (Cd207), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IDA]	Langerin	Langerin
Mus musculus	RefSeq	ILMN_217016	ILMN_237595	DIDO1	NM_177852.3	NM_177852.3		23856	51571540	NM_177852.3	Dido1	NP_808520.2	ILMN_1257214	007400315	S	4612	CCCCAAGGCCTGTACTCCACACCACTTGGACTACATACACCTAAACTGGC	2	-	180403237-180403286	2qH4	Mus musculus death inducer-obliterator 1 (Dido1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Datf1; D130048F08Rik; C530043I07; Dido3; Dido2; mKIAA0333; 6720461J16Rik; DIO-1	Datf1; D130048F08Rik; C530043I07; Dido3; Dido2; mKIAA0333; 6720461J16Rik; DIO-1
Mus musculus	RefSeq	ILMN_248667	ILMN_248667	NR1H5	NM_201619.1	NM_201619.1		381463	42491363	NM_201619.1	Nr1h5	NP_963913.1	ILMN_3147526	000270243	A	1332	CCATCCAGAAGACCCACAGCATTTCGCCCACCTCATAGGGAGGCTTACTG	3	-	102744905-102744954	3qF2.2	Mus musculus nuclear receptor subfamily 1, group H, member 5 (Nr1h5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC141184; Fxrb	MGC141184; Fxrb
Mus musculus	RefSeq	ILMN_185027	ILMN_258960	LRCH1	NM_001033439.2	NM_001033439.2		380916	90991703	NM_001033439.2	Lrch1	NP_001028611.2	ILMN_2423579	001780739	S	4624	TAGTATGATAAGTAGACAGAATGTATATAATGCAAACCCTTTTATTATTT	14	-	75154513-75154562	14qD3	Mus musculus leucine-rich repeats and calponin homology (CH) domain containing 1 (Lrch1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1016; AW215503; 4832412D13Rik; Chdc1; AI552548	mKIAA1016; AW215503; 4832412D13Rik; Chdc1; AI552548
Mus musculus	RefSeq	ILMN_185027	ILMN_258960	LRCH1	NM_001033439.2	NM_001033439.2		380916	90991703	NM_001033439.2	Lrch1	NP_001028611.2	ILMN_2473718	002510356	S	4327	GTGATGGTCTAGAATGTTGTACCTTCAGGGCTTTGCACCCCAGAGTCCTG	14	-	75154810-75154859	14qD3	Mus musculus leucine-rich repeats and calponin homology (CH) domain containing 1 (Lrch1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1016; AW215503; 4832412D13Rik; Chdc1; AI552548	mKIAA1016; AW215503; 4832412D13Rik; Chdc1; AI552548
Mus musculus	RefSeq	ILMN_217366	ILMN_217366	GEMIN4	NM_177367.2	NM_177367.2		276919	31340774	NM_177367.2	Gemin4	NP_796341.1	ILMN_2963974	004610075	S	3208	TGAGGGCAGAACAAAACTATGCCTCCGTCCACCGTGGTGTTTCTGCAGGG	11	-	76024203-76024252	11qB5	Mus musculus gem (nuclear organelle) associated protein 4 (Gemin4), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any complex of RNA and protein [goid 43021] [evidence ISO]	AU015359; MGC28146; 4932415L08Rik	AU015359; MGC28146; 4932415L08Rik
Mus musculus	RefSeq	ILMN_217366	ILMN_217366	GEMIN4	NM_177367.2	NM_177367.2		276919	31340774	NM_177367.2	Gemin4	NP_796341.1	ILMN_2682362	007000475	S	3201	GACCTGTTGAGGGCAGAACAAAACTATGCCTCCGTCCACCGTGGTGTTTC	11	-	76024210-76024258:76024259-76024259	11qB5	Mus musculus gem (nuclear organelle) associated protein 4 (Gemin4), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any complex of RNA and protein [goid 43021] [evidence ISO]	AU015359; MGC28146; 4932415L08Rik	AU015359; MGC28146; 4932415L08Rik
Mus musculus	RefSeq	ILMN_217366	ILMN_217366	GEMIN4	NM_177367.2	NM_177367.2		276919	31340774	NM_177367.2	Gemin4	NP_796341.1	ILMN_1223348	006380735	S	1872	CCACACCCAAAGAAGAGAAGCAGTTTCTGGAGCTGGTAAGCTGCCTGACG	11	-	76025539-76025588	11qB5	Mus musculus gem (nuclear organelle) associated protein 4 (Gemin4), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any complex of RNA and protein [goid 43021] [evidence ISO]	AU015359; MGC28146; 4932415L08Rik	AU015359; MGC28146; 4932415L08Rik
Mus musculus	Riken	ILMN_204146	ILMN_204146	C730013O11RIK	ri|C730013O11|PX00086H23|AK050083|2881					AK050083	C730013O11Rik		ILMN_2562725	000520504	S	2687	TGTGAAATGAACTTTGTGCTGCTCCTCTTTTGCGGAGGATTGTGATGGGC										
Mus musculus	MEEBO	ILMN_222118	ILMN_222118	5730596B20RIK	scl0077580.1_294	NM_175261.2			31340750	NM_175261.2	5730596B20Rik		ILMN_1230418	006480768	S	3250	GGGTCAGGATTTTGCCAAATCTGAAGAGACCTAATGCCCTAGCCAAACCC										
Mus musculus	RefSeq	ILMN_193988	ILMN_232352	PPAT	XM_001002886.2	XM_001002886.2		231327	149253797	XM_001002886.2	Ppat	XP_001002886.1	ILMN_1222130	006560681	S	2406	CATGAAGAATTTGAGTTCATTGTGCCCCATAGGTATCTAGTCTGTACAGT				5qC3.3	PREDICTED: Mus musculus phosphoribosyl pyrophosphate amidotransferase, transcript variant 8 (Ppat), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193988	ILMN_232352	PPAT	XM_001002886.2	XM_001002886.2		231327	149253797	XM_001002886.2	Ppat	XP_001002886.1	ILMN_1245424	005890634	S	2111	GTAGGGTCATCAAGAAGTGGTCTACATACTGTTGTTACTCAGGTGGTACC				5qC3.3	PREDICTED: Mus musculus phosphoribosyl pyrophosphate amidotransferase, transcript variant 8 (Ppat), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	MEEBO	ILMN_224015	ILMN_224015	PMFBP1	scl33341.21.1_109				9910569	NM_019938	Pmfbp1		ILMN_2773224	001710110	S	3253	GGTCCATCAAGGCCCCTGTCTAGTTTGCAAGAAGTTATGCTTTGCTGAGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]				
Mus musculus	RefSeq	ILMN_221601	ILMN_221601	LCA5	NM_029434.2	NM_029434.2		75782	142366770	NM_029434.2	Lca5	NP_083710.1	ILMN_1219153	002600392	S	1814	CTGGAGTTGGTTTTTCTTAAGACCCAAAGTTGGGAGGGGGTGGATCTGAG	9	-	83285079-83285128	9qE2	Mus musculus Leber congenital amaurosis 5 (human) (Lca5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		ORF64; AV274874; 4930431B11Rik; 5730406O13Rik	ORF64; AV274874; 4930431B11Rik; 5730406O13Rik
Mus musculus	Riken	ILMN_202335	ILMN_202335	GT(ROSA)26ASSOR	ri|5430400L19|PX00038G01|AK017246|1765					AK017246	Gt(ROSA)26asSor		ILMN_1230124	003060195	S	1406	CTGGCATGCAGCTTGGTAGCCTGAGTGCTGGGATCATGGTACATATCACC										
Mus musculus	Riken	ILMN_206205	ILMN_206205	HSPG2	ri|C130012H18|PX00167M08|AK081381|1672					AK081381	Hspg2		ILMN_2578369	001850341	S	1506	AAGAATTTGGCTGGTGTGTATATCTGTCTCTGTCCGTGCTTATCTTCATG						A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_201326	ILMN_201326	LOC382449	XM_356511.1	XM_356511.1			38090939	XM_356511.1	LOC382449		ILMN_1238247	001940403	S	127	TCCCAGGACCTGGATGTGGTGAGTGTGCAGGTGTGGGATGTGGCTGCTGT										
Mus musculus	RefSeq	ILMN_214262	ILMN_311837	LOC665103	XR_030919.1	XR_030919.1		665103	149233649	XR_030919.1	LOC665103		ILMN_2738738	000780681	S	948	AAAAATCTAAAACTTAAATGTTGCCCTGTTTTCCAAATAAAGGGTGAAAA				1qA2	PREDICTED: Mus musculus similar to Translocase of inner mitochondrial membrane 23 homolog (yeast) (LOC665103), misc RNA.					
Mus musculus	RefSeq	ILMN_216935	ILMN_216935	NPFF	NM_018787.1	NM_018787.1		54615	9055293	NM_018787.1	Npff	NP_061257.1	ILMN_2677157	002630719	S	140	CCACAGTATGCCCACATTCCAGACAGGATCCAGACTCCTGGGTCCCTCTT	15	-	102354628-102354677	15qF3	Mus musculus neuropeptide FF-amide peptide precursor (Npff), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216414	ILMN_216414	HSD17B7	NM_010476.3	NM_010476.3		15490	87162469	NM_010476.3	Hsd17b7	NP_034606.3	ILMN_1229529	001070097	S	4460	GTTTCTGGCTATATTTCTAGTGTTTGACCAGTGCTTGCCATTTCCTGGGC	1	-	171879732-171879781	1qH3	Mus musculus hydroxysteroid (17-beta) dehydrogenase 7 (Hsd17b7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: 4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NADP+ = 4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-one + NADPH + H+ [goid 253] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: 4-alpha-methyl-5-alpha-cholest-7-en-3-beta-ol + NADP+ = 4-alpha-methyl-5-alpha-cholest-7-en-3-one + NADPH + H+ [goid 50576] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]	AI266814	AI266814
Mus musculus	RefSeq	ILMN_207471	ILMN_207471	B830017A01RIK	NM_028470.1	NM_028470.1			46849714	NM_028470.1	B830017A01Rik		ILMN_2587766	005220671	I	774	TCAAAGACCCGAGAAGCAGAGACGGTGGTGGCAGCTGATCTTCCCTCCCA										
Mus musculus	RefSeq	ILMN_222869	ILMN_222869	NMI	NM_019401.1	NM_019401.1		64685	33469124	NM_019401.1	Nmi	NP_062274.1	ILMN_2755958	006550367	S	1076	GGCCAGAGAAACCATATGAAACTTATAGCCTTGAACTAAAATCACTGCCA	2	-	51804038-51804087	2qC1.1	Mus musculus N-myc (and STAT) interactor (Nmi), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Mus musculus	RefSeq	ILMN_219112	ILMN_219112	DOC2G	NM_021791.2	NM_021791.2		60425	40254528	NM_021791.2	Doc2g	NP_068563.2	ILMN_2781153	006290653	S	1099	ATGATTTCATTGGTGGGGTGCAGCTGAGTGGCAGAGCCAGTGGGGAACGC	19	+	4006637-4006648:4006719-4006756	19qA	Mus musculus double C2, gamma (Doc2g), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	D830013O18Rik	D830013O18Rik
Mus musculus	RefSeq	ILMN_199662	ILMN_199662	LOC383796	XM_357258.1	XM_357258.1			38075730	XM_357258.1	LOC383796		ILMN_1241428	001260427	S	118	GGGATTGGAGTCTGCAGCAACTGGCTTGACTTGGCAGACGTAGAAAGAGC										
Mus musculus	RefSeq	ILMN_200249	ILMN_200249	LOC386068	XM_359052.1	XM_359052.1			38081085	XM_359052.1	LOC386068		ILMN_1214874	006760400	S	193	CGAAACCCCGTCCCTTTTAAGGAGAAATATCCTCCGCCTAGGACGTGTCT										
Mus musculus	RefSeq	ILMN_208841	ILMN_208841	OLFR464	NM_146412.1	NM_146412.1		258407	33239007	NM_146412.1	Olfr464	NP_666524.1	ILMN_2590050	000240494	S	740	TGTCTATGATCTTCATTCCCTGCATCTATATCTACTCCAGACCCTTCACC	11	-	87727617-87727666	11qC	Mus musculus olfactory receptor 464 (Olfr464), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR240-2	MOR240-2
Mus musculus	RefSeq	ILMN_215885	ILMN_215885	PPP1R16A	NM_033371.2	NM_033371.2		73062	67514552	NM_033371.2	Ppp1r16a	NP_203535.1	ILMN_2664779	000010259	S	2091	GGAGTGTCTCCTATCATCTGAGTCCTGAGGAGAACAGTGCCCCTGATGCC	15	+	76519397-76519446	15qD3	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 16A (Ppp1r16a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]			2900084E10Rik; Mypt3; R75527	2900084E10Rik; Mypt3; R75527
Mus musculus	Riken	ILMN_203832	ILMN_203832	A330030K22RIK	ri|A330030K22|PX00130B23|AK039354|1157					AK039354	A330030K22Rik		ILMN_1235680	002600487	S	753	CACCATCCACAGGTTGAGAAATGCTGTCTCCTGTGATTTGCGCTTCTGCG										
Mus musculus	MEEBO	ILMN_194730	ILMN_194730	HSF1	scl47794.10_431				33859479	NM_008296	Hsf1		ILMN_2509081	000110703	S	18	GGTCCTGCATGAATTAGCAGGGTAGGATAAGAACTCGCTGAGCTTTCCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_186652	ILMN_232747	B3GALT2	NM_020025.3	NM_020025.3		26878	141801472	NM_020025.3	B3galt2	NP_064409.2	ILMN_2610493	003780246	S	4299	CCAAAAGAAAGTTTACAGAATCAACTGTATAACACTAAACTCAAAGTGTT	1	+	145496834-145496883	1qF	Mus musculus UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 (B3galt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]		
Mus musculus	RefSeq	ILMN_185588	ILMN_317440	BIN1	NM_001083334.1	NM_001083334.1		30948	134053946	NM_001083334.1	Bin1	NP_001076803.1	ILMN_2628339	003120706	S	1732	TGAAAAGTGTCGGGAAACTGGGGGGCGGAAACCTAAGCCAAGAGGTATAC	18	+	32595004-32595053	18qB1	Mus musculus bridging integrator 1 (Bin1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BRAMP-2; Amphl; SH3P9; ALP-1	BRAMP-2; Amphl; SH3P9; ALP-1
Mus musculus	RefSeq	ILMN_207519	ILMN_228718	1810013L24RIK	XM_907664.2	XM_907664.2		69053	94400372	XM_907664.2	1810013L24Rik	XP_912757.2	ILMN_1260569	005810551	I	1280	GCCAGATCTTCAGGCTTCCATTTTTGCAGCCACACTGAACCACACATCTG				16qA1	PREDICTED: Mus musculus RIKEN cDNA 1810013L24 gene (1810013L24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211519	ILMN_228718	1810013L24RIK	XM_907664.2	XM_907664.2		69053	94400372	XM_907664.2	1810013L24Rik	XP_912757.2	ILMN_2616630	005860364	S	3537	GCTGAGTTCTCCACTGCAGTGTCCTGAACGTAGCTGAGAGGCTCACGAAC				16qA1	PREDICTED: Mus musculus RIKEN cDNA 1810013L24 gene (1810013L24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209359	ILMN_209359	ASB7	NM_178236.3	NM_178236.3		117589	141801909	NM_178236.3	Asb7	NP_839954.1	ILMN_2601670	001440477	S	1968	TGCCATTCCTGAATCCACACTGCACAGTGCAATTTAGTGCATTTGTAGAG	7	-	73822028-73822077	7qC	Mus musculus ankyrin repeat and SOCS box-containing protein 7 (Asb7), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Asb-7; AI449039; D030055C23Rik	Asb-7; AI449039; D030055C23Rik
Mus musculus	RefSeq	ILMN_189877	ILMN_209359	ASB7	NM_178236.3	NM_178236.3		117589	141801909	NM_178236.3	Asb7	NP_839954.1	ILMN_2701671	000730630	S	820	CCAAATGGCCGAGATGCCAATGGCTGGACCTTGCTCCATTTCTCTGCAGC	7	-	73824010-73824059	7qC	Mus musculus ankyrin repeat and SOCS box-containing protein 7 (Asb7), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Asb-7; AI449039; D030055C23Rik	Asb-7; AI449039; D030055C23Rik
Mus musculus	RefSeq	ILMN_198673	ILMN_230987	LOC666303	XR_001855.1	XR_001855.1		666303	94408276	XR_001855.1	LOC666303		ILMN_1245690	005690673	S	1158	ACGTGACTGGTGAAGGCACAACTCTGAGGTGCTCATGGGATCCAGTGGAG	X	-	132549942-132549991	XqF1	PREDICTED: Mus musculus hypothetical protein LOC666303 (LOC666303), mRNA.					
Mus musculus	RefSeq	ILMN_213369	ILMN_213369	RAB32	NM_026405.3	NM_026405.3		67844	141802847	NM_026405.3	Rab32	NP_080681.1	ILMN_1221274	001780619	S	1769	GGTTATATAATGCCTCGGGCACTTAGGAAGACCCACTATACTGTATTGCC	10	-	10265072-10265121	10qA1	Mus musculus RAB32, member RAS oncogene family (Rab32), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2810011A17Rik; AU022057	2810011A17Rik; AU022057
Mus musculus	RefSeq	ILMN_192747	ILMN_242745	CHRND	NM_021600.2	NM_021600.2		11447	110225334	NM_021600.2	Chrnd	NP_067611.2	ILMN_1229136	000870400	S	606	GGAGGAAAACAACCGCTCTTACCCCATCGAGTGGATCATCATTGACCCTG	1	+	89089469-89089518	1qD	Mus musculus cholinergic receptor, nicotinic, delta polypeptide (Chrnd), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IPI]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]	Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IGI]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IGI]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Achr-4; Acrd; L10076	Achr-4; Acrd; L10076
Mus musculus	RefSeq	ILMN_192747	ILMN_242745	CHRND	NM_021600.2	NM_021600.2		11447	110225334	NM_021600.2	Chrnd	NP_067611.2	ILMN_2662184	001340685	S	800	TCAACATTCTGGTACCCTGCGTGCTCATCTCCTTCATGATCAACCTAGTC	1	+	89091507-89091556	1qD	Mus musculus cholinergic receptor, nicotinic, delta polypeptide (Chrnd), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IPI]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]	Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IGI]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IGI]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Achr-4; Acrd; L10076	Achr-4; Acrd; L10076
Mus musculus	RefSeq	ILMN_220841	ILMN_220841	CLDN11	NM_008770.2	NM_008770.2		18417	118130649	NM_008770.2	Cldn11	NP_032796.1	ILMN_1246139	001850435	S	1713	GTGTCTAAGACTCTGGATACTGCAAGCTCCGTCCGGTGCATTTGTTCAGG	3	+	31063160-31063209	3qA3	Mus musculus claudin 11 (Cldn11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process by which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal [goid 8366] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Otm; Claudin-11; Claudin11; Osp	Otm; Claudin-11; Claudin11; Osp
Mus musculus	RefSeq	ILMN_193875	ILMN_193875	TRIM39	NM_024468.1	NM_024468.1		79263	13277375	NM_024468.1	Trim39	NP_077788.1	ILMN_1251912	004880278	S	2886	CCAAACAACCTGGATTATCTGCTGCCTGGGTAATCTTCACACAAGACTGA	17	-	36463684-36463733	17qB1	Mus musculus tripartite motif-containing 39 (Trim39), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	tfp; RBCC-B30.2; E130103K13Rik; Rnf23; 1100001D15Rik; KIAA4179; mKIAA4179	tfp; RBCC-B30.2; E130103K13Rik; Rnf23; 1100001D15Rik; KIAA4179; mKIAA4179
Mus musculus	RefSeq	ILMN_198614	ILMN_259161	GM614	NM_001033362.2	NM_001033362.2		245536	142370864	NM_001033362.2	Gm614	NP_001028534.1	ILMN_1239528	006770086	S	649	AAGACGGACCACCTTCCACCCGCAGACCATTCTACAAGACTAGAGCAGAC	X	-	98456764-98456813	XqD	Mus musculus gene model 614, (NCBI) (Gm614), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	RP23-440J15.1; Il2rg	RP23-440J15.1; Il2rg
Mus musculus	Riken	ILMN_204644	ILMN_204644	1520402A20RIK	ri|1520402A20|PX00101J18|AK028065|2270					AK028065	1520402A20Rik		ILMN_1240650	000290538	S	2129	CCCACAAGTCCTCTGACCTCCACATTTGCACTGGGGCACACATGCACAGC										
Mus musculus	MEEBO	ILMN_214545	ILMN_214545	PLCD1	scl35231.15.1_81	NM_019676.1			9790166	NM_019676.1	Plcd1		ILMN_2649091	002480372	S	2401	CTGAGTGGGCGGAGCTGTGTCCACACCTGTCTGGCAATGTTGCACCTCTG						That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215524	ILMN_215524	RUNDC3B	NM_198620.1	NM_198620.1		242819	39930588	NM_198620.1	Rundc3b	NP_941022.1	ILMN_2660596	007610280	S	3315	CCCAGTTGGTACACTTTTTCAGATCTGTCCGATAGAAGCACTAGTTTGTG	5	-	8490646-8490695	5qA1	Mus musculus RUN domain containing 3B (Rundc3b), mRNA.				MGC68340	MGC68340
Mus musculus	Riken	ILMN_204427	ILMN_204427	A430046P16RIK	ri|A430046P16|PX00135O10|AK040031|1660					AK040031	A430046P16Rik		ILMN_2564888	006330424	S	958	CTCCAGGCAACCTGTCAAGAGAATAGTGCTGCCCACAGTGGACTAGACCT										
Mus musculus	RefSeq	ILMN_196500	ILMN_196500	2510047L19RIK	XM_355816.1	XM_355816.1			38085260	XM_355816.1	2510047L19Rik		ILMN_1245138	007150372	S	198	AACCCTGAAGTAAATAGAGAAGGGAGAGCTGCTTTGACCGGGAGGAGGCC										
Mus musculus	MEEBO	ILMN_212366	ILMN_212366	RAB3B	scl25136.5_423	NM_023537.4			31543569	NM_023537.4	Rab3b		ILMN_1216073	007510551	S	3118	CTTGGAATCCTGCCCAAGCTGTCAGGTCCAAGTCCACCTGAGAAAAGATG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]; The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine [goid 18125] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_222468	ILMN_222468	LATS2	NM_015771.2	NM_015771.2		50523	68448548	NM_015771.2	Lats2	NP_056586.2	ILMN_2771735	006040240	S	3659	AAATGGGCAACAGGAAGAGTCAACATGATTTCAAATTAGCCCTCTGAGGA	14	-	58309981-58310030	14qC3	Mus musculus large tumor suppressor 2 (Lats2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AV277261; AW228608; 4932411G09Rik	AV277261; AW228608; 4932411G09Rik
Mus musculus	RefSeq	ILMN_216297	ILMN_216297	BSND	NM_080458.2	NM_080458.2		140475	91598893	NM_080458.2	Bsnd	NP_536706.2	ILMN_2669493	005220451	S	2640	GGACTGACTGTGACCCACATCAGACAGAGCAAAGTCAGCACCAGGGGATG	4	-	106156087-106156136	4qC7	Mus musculus Bartter syndrome, infantile, with sensorineural deafness (Barttin) (Bsnd), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IDA]	The regulation of the levels, transport, and metabolism of ions within a cell or between a cell and its external environment [goid 6873] [evidence ISO]; The regulation of the levels, transport, and metabolism of chloride ions within a cell or between a cell and its external environment [goid 30644] [evidence NAS]; The regulation of the levels, transport, and metabolism of potassium ions within a cell or between a cell and its external environment [goid 30007] [evidence NAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence NAS]	Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC47291	MGC47291
Mus musculus	RefSeq	ILMN_209943	ILMN_209943	EPB4.1L1	NM_013510.3	NM_013510.3		13821	76056873	NM_013510.3	Epb4.1l1	NP_038538.1	ILMN_2600659	007000066	S	2469	AAGACTTCATGACAACTCCCCCCTGCATCACCACAGAGACCATCTCAACC	2	+	156355151-156355200	2qH1	Mus musculus erythrocyte protein band 4.1-like 1 (Epb4.1l1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4.1N; mKIAA0338; NBL1	4.1N; mKIAA0338; NBL1
Mus musculus	RefSeq	ILMN_210435	ILMN_251486	EAF2	NM_134111.2	NM_134111.2		106389	40254104	NM_134111.2	Eaf2	NP_598872.1	ILMN_2742215	006380324	S	357	TTTGATTATTAACCATGATACTGGGGAATGTCGCCTAGAAAAGCTCAGCA	16	-	36810582-36810631	16qB3	Mus musculus ELL associated factor 2 (Eaf2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	FESTA-S; Festa; Traits; U19; FESTA-L; AW048865	FESTA-S; Festa; Traits; U19; FESTA-L; AW048865
Mus musculus	RefSeq	ILMN_210435	ILMN_251486	EAF2	NM_134111.2	NM_134111.2		106389	40254104	NM_134111.2	Eaf2	NP_598872.1	ILMN_2605601	007510634	S	932	TTTTGTATTGAGAATAAATATTCCTATGTTTATGGAAATTGTGCAACTTT	16	-	36793866-36793915	16qB3	Mus musculus ELL associated factor 2 (Eaf2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	FESTA-S; Festa; Traits; U19; FESTA-L; AW048865	FESTA-S; Festa; Traits; U19; FESTA-L; AW048865
Mus musculus	RefSeq	ILMN_251486	ILMN_251486	EAF2	NM_134111.2	NM_134111.2		106389	40254104	NM_134111.2	Eaf2	NP_598872.1	ILMN_2908933	002480458	S	1555	TGAAGCCCATTGCCAGGTGTTTGTGATATCGGTTGCTGAGAAAGAGTCAG	16	-	36793243-36793292	16qB3	Mus musculus ELL associated factor 2 (Eaf2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	FESTA-S; Festa; Traits; U19; FESTA-L; AW048865	FESTA-S; Festa; Traits; U19; FESTA-L; AW048865
Mus musculus	MEEBO	ILMN_211180	ILMN_211180	ALDOC	scl41206.9_150	XM_126120.5			38091506	XM_126120.5	Aldoc		ILMN_2613349	006840333	S	2306	CTCTGTGTGGCCTGACCTTATAATCAAAGCAGCTAACTCAGCAATTTCCA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate [goid 4332] [evidence NAS]		
Mus musculus	RefSeq	ILMN_245265	ILMN_245265	OLFR324	NM_001011743.1	NM_001011743.1		257892	58801279	NM_001011743.1	Olfr324	NP_001011743.1	ILMN_3161220	003830154	S	855	CGAGGGAGACAAACTGATCTCTGTGTTCTATGCGGTCATCGGACCCGCGC	11	+	58411748-58411797	11qB1.3	Mus musculus olfactory receptor 324 (Olfr324), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR102-2	MOR102-2
Mus musculus	RefSeq	ILMN_196915	ILMN_196915	LOC381267	XM_358539.1	XM_358539.1			38049554	XM_358539.1	LOC381267		ILMN_1239011	007150398	S	674	CTGGGTTATCTTTCTTCCATCCAGTGAGACTGTTGGTTGGGCCATCCTGC										
Mus musculus	RefSeq	ILMN_199180	ILMN_199180	LOC223263	XM_127892.2	XM_127892.2			38091629	XM_127892.2	LOC223263		ILMN_1212825	007320463	S	214	CAGAAGGCCACATTTGCAGGTTCTTACACCCTTGTTCCTTCAGGGGCACC										
Mus musculus	MEEBO	ILMN_219046	ILMN_219046	A530057A03RIK	scl20322.10.1_168	XM_130488.2			38075650	XM_130488.2	A530057A03Rik		ILMN_2703492	002060240	S	2363	GCTCAGGACACAGCTAACCTGAACCTGTGTTTGCTCATCATTTGGTGTAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sn-glycerol 3-phosphate = CoA + 1-acyl-sn-glycerol 3-phosphate [goid 4366] [evidence IEA]		
Mus musculus	RefSeq	ILMN_230229	ILMN_230229	ADRBK1	NM_130863.1	NM_130863.1		110355	33859768	NM_130863.1	Adrbk1	NP_570933.1	ILMN_3000318	003120537	S	3078	CCCCTCTTGTCTACTCACTCCTAGGGCGTTTCTTTGCCGATTTTTGAATG	19	-	4286055-4286104	19qA	Mus musculus adrenergic receptor kinase, beta 1 (Adrbk1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IGI]; The process that stops, prevents or reduces the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity after prolonged stimulation with an agonist of the pathway [goid 2029] [evidence IMP]; The process that stops, prevents or reduces the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity after prolonged stimulation with an agonist of the pathway [goid 2029] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor [goid 47696] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IDA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IMP]	betaARK1; Bark-1; GRK2; Adrbk-1	betaARK1; Bark-1; GRK2; Adrbk-1
Mus musculus	RefSeq	ILMN_209230	ILMN_209230	RABGAP1L	NM_013862.4	NM_013862.4		29809	142384545	NM_013862.4	Rabgap1l	NP_038890.2	ILMN_1214241	000450524	S	1623	CTGCAGAGAGAATCTGACAAGGAGGAGCCCATCACCCCTACTAGTGCTGG	1	-	162612209-162612258	1qH2.1	Mus musculus RAB GTPase activating protein 1-like (Rabgap1l), transcript variant 1, mRNA. XM_924767 XM_924771 XM_924774	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence ISO]	mKIAA0471; HHL; 5830411O09Rik; 8430421H08Rik; 9630005B12Rik; AW049894; Hh1	mKIAA0471; HHL; 5830411O09Rik; 8430421H08Rik; 9630005B12Rik; AW049894; Hh1
Mus musculus	Riken	ILMN_204132	ILMN_204132	B230310N24RIK	ri|B230310N24|PX00159C18|AK045780|1552					AK045780	B230310N24Rik		ILMN_2562622	004060181	S	1167	GGAGCAGATCTGACCTATGTGGTCTGCAGCTCCAAATACGAAGGTGGACA										
Mus musculus	MEEBO	ILMN_209550	ILMN_209550	KRTAP16-7	scl00170656.1_3				18700011	NM_130875	Krtap16-7		ILMN_1244522	006620129	S	4	CCTCCTGCCACCATGTGCTGCAACTACTACGGAAACTCCTGTGGAGGCTG							The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The process occurring during the post-embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31077] [evidence IMP]; The process, occurring after embryonic development, by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35129] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; A multicellular organismal process involved in the cyclical phases of growth (anagen), regression (catagen), quiescence (telogen), and shedding (exogen) in the life of a hair; one of the collection or mass of filaments growing from the skin of an animal, and forming a covering for a part of the head or for any part or the whole of the body [goid 22405] [evidence IMP]; The aggregation of coloring matter in a particular location in a tissue, occurring in response to an external stimulus [goid 43480] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]			
Mus musculus	RefSeq	ILMN_214063	ILMN_214063	CD247	NM_031162.1	NM_031162.1		12503	13624302	NM_031162.1	Cd247	NP_112439.1	ILMN_2828172	000240280	S	1117	CAAATCAAAGAAACCACCCTCCCCTGGCTTATAGCAGCAGTATTATGACC	1	+	167797367-167797416	1qH2.3	Mus musculus CD247 antigen (Cd247), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISO]; A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein [goid 42105] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4930549J05Rik; Cd3; CD3-zeta; T3z; CD3-eta; Cd3z; Cd3h; TCRk; Tcrz; AW552088	4930549J05Rik; Cd3; CD3-zeta; T3z; CD3-eta; Cd3z; Cd3h; TCRk; Tcrz; AW552088
Mus musculus	RefSeq	ILMN_214063	ILMN_214063	CD247	NM_031162.1	NM_031162.1		12503	13624302	NM_031162.1	Cd247	NP_112439.1	ILMN_1256639	001440315	S	1133	CCCTCCCCTGGCTTATAGCAGCAGTATTATGACCTGACCTGGCTGAGCTT	1	+	167797383-167797432	1qH2.3	Mus musculus CD247 antigen (Cd247), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISO]; A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein [goid 42105] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4930549J05Rik; Cd3; CD3-zeta; T3z; CD3-eta; Cd3z; Cd3h; TCRk; Tcrz; AW552088	4930549J05Rik; Cd3; CD3-zeta; T3z; CD3-eta; Cd3z; Cd3h; TCRk; Tcrz; AW552088
Mus musculus	RefSeq	ILMN_214063	ILMN_214063	CD247	NM_031162.1	NM_031162.1		12503	13624302	NM_031162.1	Cd247	NP_112439.1	ILMN_1253828	006520241	S	139	ATGAAGTGGAAAGTGTCTGTTCTCGCCTGCATCCTCCACGTGCGGTTCCC	1	+	167718992-167719017:167785297-167785320	1qH2.3	Mus musculus CD247 antigen (Cd247), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISO]; A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein [goid 42105] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4930549J05Rik; Cd3; CD3-zeta; T3z; CD3-eta; Cd3z; Cd3h; TCRk; Tcrz; AW552088	4930549J05Rik; Cd3; CD3-zeta; T3z; CD3-eta; Cd3z; Cd3h; TCRk; Tcrz; AW552088
Mus musculus	MEEBO	ILMN_214224	ILMN_214224	ADAMTS1	scl48269.9_156				47087139	NM_009621	Adamts1		ILMN_1238495	007320167	S	755	GTCCATGGCCGACTTCCACGGCAGCGGTCTAAAGCATTACCTTCTAACCC						A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence ISO]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IMP]		
Mus musculus	Riken	ILMN_205910	ILMN_205910	A830022J10RIK	ri|A830022J10|PX00154H20|AK043707|1117					AK043707	A830022J10Rik		ILMN_1228432	005390195	S	1028	GCAGGCTTGGTGGTGGGTGGTTTTACCTGCTGAGTCATCTTCCCAGCTCC										
Mus musculus	RefSeq	ILMN_218181	ILMN_261711	CLIP3	NM_001081114.1	NM_001081114.1		76686	124487424	NM_001081114.1	Clip3	NP_001074583.1	ILMN_1222626	000940743	S	1858	CCAGCCATCCCAAGATAGAGATTCCCAGTGACTTCAGAATAGAAACCCCG	7	+	31091944-31091993	7qB1	Mus musculus CAP-GLY domain containing linker protein 3 (Clip3), mRNA.				1500005P14Rik; AI844915	1500005P14Rik; AI844915
Mus musculus	MEEBO	ILMN_213048	ILMN_213048	EIF3S4	scl053356.4_13	NM_016876.2			31980807	NM_016876.2	Eif3s4		ILMN_2737192	000730139	S	862	CCAAGGGTTTTGCTTTTATCAGCTTTCACCGCCGGGAGGATGCTGCACGT										
Mus musculus	RefSeq	ILMN_212357	ILMN_242507	RAPGEFL1	NM_001080925.1	NM_001080925.1		268480	124257962	NM_001080925.1	Rapgefl1	NP_001074394.1	ILMN_1250569	001010524	S	4078	GTGAACCATGTATGTTGTTCAGACCTAGCCTTCATTGCAGAAACTGCTCG	11	+	98714234-98714283	11qD	Mus musculus Rap guanine nucleotide exchange factor (GEF)-like 1 (Rapgefl1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	B230105J10	B230105J10
Mus musculus	RefSeq	ILMN_242507	ILMN_242507	RAPGEFL1	NM_001080925.1	NM_001080925.1		268480	124257962	NM_001080925.1	Rapgefl1	NP_001074394.1	ILMN_2979257	001440296	S	3759	CTGGCAAAATGTCCACAGACATGCCATACGACCTCCCTGGCCCATAGTGG	11	+	98713915-98713964	11qD	Mus musculus Rap guanine nucleotide exchange factor (GEF)-like 1 (Rapgefl1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	B230105J10	B230105J10
Mus musculus	MEEBO	ILMN_196295	ILMN_196295	2010003O02RIK	scl25549.2.1_20						2010003O02Rik		ILMN_2523427	004880373	S	20	TTCTTAGCAAACACTTCTTTTCTTCAGATGGCACCTATGTAGACTCAAAG										
Mus musculus	RefSeq	ILMN_244206	ILMN_244206	OLFR1246	NM_146792.1	NM_146792.1		258788	22129268	NM_146792.1	Olfr1246	NP_667003.1	ILMN_3001871	001030397	S	691	AGGCGCAAAGCCCTGTCTACTTGCAGCTCCCACATCATGGTAGTTACACT	2	-	89430530-89430579	2qE1	Mus musculus olfactory receptor 1246 (Olfr1246), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-9	MOR231-9
Mus musculus	Riken	ILMN_201761	ILMN_201761	2210009F20RIK	ri|2210009F20|ZX00051B05|AK008685|1032					AK008685	2210009F20Rik		ILMN_1244042	002370201	S	921	CTCTCAGGATGGCTAAGACCAAACCTCAAGGGATAGCACATGCTCACAAG										
Mus musculus	RefSeq	ILMN_210886	ILMN_210886	OLFR890	NM_146481.2	NM_146481.2		258474	153945712	NM_146481.2	Olfr890	NP_666692.2	ILMN_1222814	006660711	S	648	GACTATTTTTATTTCTTACACCTTGATCCTTTCCAACATCCTCAGCATCC				9qA4	Mus musculus olfactory receptor 890 (Olfr890), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR162-3	MOR162-3
Mus musculus	Riken	ILMN_204936	ILMN_204936	D230011M17RIK	ri|D230011M17|PX00188I01|AK051860|1596					AK051860	D230011M17Rik		ILMN_1252938	003060044	S	1475	GATGAAGCATCCCGGAAACCCTTGCAAACGTCGAGCGCTTCTTGTCCCAA										
Mus musculus	RefSeq	ILMN_214157	ILMN_214157	HNRPLL	NM_144802.3	NM_144802.3		72692	110347534	NM_144802.3	Hnrpll	NP_659051.3	ILMN_2768850	007560424	S	2638	GACACGAACACACTTGTATGGTATGCACTCAAACTCAGATTGCTGTTTCT	17	-	80429255-80429304	17qE3	Mus musculus heterogeneous nuclear ribonucleoprotein L-like (Hnrpll), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AI852082; AI256697; PHGPx; 2810036L13Rik; 2510028H02Rik	AI852082; AI256697; PHGPx; 2810036L13Rik; 2510028H02Rik
Mus musculus	RefSeq	ILMN_214157	ILMN_214157	HNRPLL	NM_144802.3	NM_144802.3		72692	110347534	NM_144802.3	Hnrpll	NP_659051.3	ILMN_2684732	001400315	S	1980	GTCTGGGCTATTGGAGTGGAAGTGCAAAACTGATGCCGTGGAAGCTCTCA	17	-	80431913-80431962	17qE3	Mus musculus heterogeneous nuclear ribonucleoprotein L-like (Hnrpll), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AI852082; AI256697; PHGPx; 2810036L13Rik; 2510028H02Rik	AI852082; AI256697; PHGPx; 2810036L13Rik; 2510028H02Rik
Mus musculus	RefSeq	ILMN_201046	ILMN_201046	LOC384726	XM_357822.1	XM_357822.1			38088134	XM_357822.1	LOC384726		ILMN_1223831	001990554	S	449	ACAATCGGCCTGGCAACCAACAGAAGTTACACACAGACAGGTGCTGGCAG										
Mus musculus	RefSeq	ILMN_208869	ILMN_208869	SLC29A1	NM_022880.1	NM_022880.1		63959	12584967	NM_022880.1	Slc29a1	NP_075018.1	ILMN_2888144	005870687	S	1772	CTGACAGCTCCGACTGATGCCCGCTTACTCCAAGCACAAGAGACTCCAGG	17	-	45048993-45049042	17qB3	Mus musculus solute carrier family 29 (nucleoside transporters), member 1 (Slc29a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), into, out of, within or between cells [goid 15858] [evidence IDA]	Catalysis of the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other [goid 5337] [evidence IDA]	ENT1; 1200014D21Rik; AA407560	ENT1; 1200014D21Rik; AA407560
Mus musculus	RefSeq	ILMN_258468	ILMN_258468	SEMA3G	NM_001025379.1	NM_001025379.1		218877	84794604	NM_001025379.1	Sema3g	NP_001020550.1	ILMN_2925225	004560129	S	3351	GGGTCCATGAGCAGGTGTCCTCAAGAGCCAAGGTGACATTAGTTGGTTCA	14	+	32042362-32042411	14qB	Mus musculus sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G (Sema3g), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AK129018	AK129018
Mus musculus	Riken	ILMN_204462	ILMN_204462	COL6A2	ri|B130009B12|PX00157E22|AK044870|4287					AK044870	Col6a2		ILMN_1258759	005670184	S	4000	TGCGCAGCTGTGGATTGCTGGGGCTGTCTTTATGGAGTAGCAAGTTCCCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_205494	ILMN_205494	ALDH3A2	ri|D130018F03|PX00182P20|AK051219|2542					AK051219	Aldh3a2		ILMN_1258695	005720452	S	2368	GTCTAGGCTGAGTCTGGCAAAGCCTGCGTCCTGATTAAAAGTGAGTGGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]		
Mus musculus	Riken	ILMN_204650	ILMN_204650	4831444O18RIK	ri|4831444O18|PX00103E07|AK029261|2411					AK029261	4831444O18Rik		ILMN_1259727	001510048	S	1206	AAGGACTGACCATGAGCCTCTGAAAGGACGCATGGGAATAAATTTCCACC										
Mus musculus	RefSeq	ILMN_200231	ILMN_200231	LOC386014	XM_359033.1	XM_359033.1			38081013	XM_359033.1	LOC386014		ILMN_2538035	000630288	S	636	CTTTAGGAGCCAGAGCGCAAGAGAGCAAGAGAGAGAATGGGGAAACCCCG										
Mus musculus	Riken	ILMN_203346	ILMN_203346	B230215A15RIK	ri|B230215A15|PX00069J23|AK045605|3197					AK045605	B230215A15Rik		ILMN_1228862	007320243	S	2798	CAGAGGTCAGGATGAAAGCATGAACTGTCTGTCCTGCCTTACTGTATTTC										
Mus musculus	RefSeq	ILMN_197961	ILMN_325412	GM1758	XM_001474975.1	XM_001474975.1		385737	149267755	XM_001474975.1	Gm1758	XP_001475025.1	ILMN_2529983	001820598	S	241	GACAGGAGGAACAGGACTTCACTCCACTACGCATGTGCTCATAACCACCC				16qA1	PREDICTED: Mus musculus gene model 1758, (NCBI) (Gm1758), mRNA.					
Mus musculus	RefSeq	ILMN_209734	ILMN_209734	DNAJA1	NM_008298.2	NM_008298.2		15502	31542560	NM_008298.2	Dnaja1	NP_032324.1	ILMN_2800446	004120768	S	3064	GGCTGAGGGATAAGGCATGGGATTTGCATTGGATCAAAACCAGTCTGTGC	4	+	40923376-40923425	4qA5	Mus musculus DnaJ (Hsp40) homolog, subfamily A, member 1 (Dnaja1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISO]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Nedd7; Hsj2	Nedd7; Hsj2
Mus musculus	Riken	ILMN_202737	ILMN_202737	1700061G19RIK	ri|1700061G19|ZX00075D11|AK018867|944					AK018867	1700061G19Rik		ILMN_2551891	005570288	S	872	GTCACGTGTGAATTGTTTGTCACTCTGTGTCTCGTCTCAGTTTCCTCAAG										
Mus musculus	RefSeq	ILMN_213703	ILMN_213703	CBLN4	NM_175631.3	NM_175631.3		228942	146198642	NM_175631.3	Cbln4	NP_783439.1	ILMN_2639849	002120088	S	2521	GCGCCAAACCTTGGCAAAGTACCTCTCCTTGGTGGGAAATCGAATACTCT				2qH3	Mus musculus cerebellin 4 precursor protein (Cbln4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI848962	AI848962
Mus musculus	RefSeq	ILMN_230444	ILMN_230444	DPCR1	NM_001033366.1	NM_001033366.1		268949	84370307	NM_001033366.1	Dpcr1	NP_001028538.1	ILMN_2872879	003180187	S	2345	CTCCATCTTTACCGAAAGCGCGTGCTGGCTTCAACTTGCGGGAGTCACCG	17	-	35244021-35244070	17qB1	Mus musculus diffuse panbronchiolitis critical region 1 (human) (Dpcr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm630	Gm630
Mus musculus	RefSeq	ILMN_200755	ILMN_200755	LOC385308	XM_358181.1	XM_358181.1			38085905	XM_358181.1	LOC385308		ILMN_1228672	001400327	S	402	GGCTAGAGAGCACATAGCCCAAGCCCTACCACTCCCACTATTTGGCCATT										
Mus musculus	RefSeq	ILMN_189348	ILMN_239783	SLC39A9	XM_992396.1	XM_992396.1		328133	94394169	XM_992396.1	Slc39a9	XP_997490.1	ILMN_2460491	006580669	S	3661	GAGACCTGAAGATGGGGACTGGTGGGAAAGGACCAGCAGACATGTAGGAC				12qD1	PREDICTED: Mus musculus solute carrier family 39 (zinc transporter), member 9 (Slc39a9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]		
Mus musculus	RefSeq	ILMN_258172	ILMN_258172	ALDOC	NM_009657.3	NM_009657.3		11676	145386580	NM_009657.3	Aldoc	NP_033787.2	ILMN_3160137	005550470	S	1431	GCCTTACATTGCTGTACCCGAGACCACAGGATGGGAGGGTAGAGATGCCC				11qB5	Mus musculus aldolase C, fructose-bisphosphate (Aldoc), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate [goid 4332] [evidence NAS]	AI847350; AU040929; Scrg2; Aldo3	AI847350; AU040929; Scrg2; Aldo3
Mus musculus	MEEBO	ILMN_185280	ILMN_185280	TNC	scl0002731.1_70	NM_011607.1			7106434	NM_011607.1	Tnc		ILMN_2463180	005420333	S	11	ACCACACGGATCACTGAGGCACTGATGTAGGCCCCTCTGCAACGACTTCC						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence ISO]		
Mus musculus	RefSeq	ILMN_216362	ILMN_216362	TFPI2	NM_009364.3	NM_009364.3		21789	142382435	NM_009364.3	Tfpi2	NP_033390.1	ILMN_2670204	003990440	S	1186	CAATATTATGAAGAATAAGAGTTATTACAAAAAAGAGCTATAATTGTTAT	6	-	3912867-3912916	6qA1	Mus musculus tissue factor pathway inhibitor 2 (Tfpi2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	PP5/TFPI-2; AV000670	PP5/TFPI-2; AV000670
Mus musculus	MEEBO	ILMN_184585	ILMN_184585	SCL0002066.1_0	scl0002066.1_0	AK044634.1			26336658	AK044634.1	scl0002066.1_0		ILMN_2419873	006040630	S	16	AACGGCTCCTCCCCCACTTAATGAGGGAGAAAGTTTGGTCAGCCGCATCC										
Mus musculus	MEEBO	ILMN_193163	ILMN_193163	UPF3B	scl54333.11_68	XM_110787.2			25056786	XM_110787.2	Upf3b		ILMN_2494625	001450154	S	2	CACAAGTAGAGCGGAGGATAGAGCAAATTATGGCTGATGGAAAAGATTTA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence ISO]	Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence ISO]		
Mus musculus	RefSeq	ILMN_219469	ILMN_219469	IFFO1	NM_178787.5	NM_178787.5		320678	89179301	NM_178787.5	Iffo1	NP_848902.4	ILMN_2709270	004850215	S	2537	GCGCCCTTCCAATTTTATCTAATTTTACGTCTGTCTGCAGGAGGGCTGGG	6	+	125111497-125111546	6qF3	Mus musculus intermediate filament family orphan 1 (Iffo1), transcript variant 2, mRNA.				HOM-TES-103; 4733401N06Rik	HOM-TES-103; 4733401N06Rik
Mus musculus	RefSeq	ILMN_213583	ILMN_213583	MRGPRB1	NM_205810.4	NM_205810.4		233231	154240717	NM_205810.4	Mrgprb1	NP_991379.3	ILMN_1245063	006220326	S	896	GGTTCCTCTTAGAGTGGATTAGGGAATTTCATGATAATAAACCTTGTGGT				7qB4	Mus musculus MAS-related GPR, member B1 (Mrgprb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgB1	MrgB1
Mus musculus	RefSeq	ILMN_218299	ILMN_218299	SLCO1A6	NM_023718.2	NM_023718.2		28254	148540027	NM_023718.2	Slco1a6	NP_076207.1	ILMN_1214065	006130026	S	2349	TCACTTAATTTCATTGAATTTACATTTCAATATTGGAGGTAATTAGAGCT				6qG2	Mus musculus solute carrier organic anion transporter family, member 1a6 (Slco1a6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Slc21a13; AI790453; Oatp5; 4930422F19Rik; Oatp-5	Slc21a13; AI790453; Oatp5; 4930422F19Rik; Oatp-5
Mus musculus	MEEBO	ILMN_211053	ILMN_211053	NFKBIB	scl31572.8.1_327	NM_010908.3			31559895	NM_010908.3	Nfkbib		ILMN_2612007	000150672	S	1880	CGGACCATTTGTGAAGCGATGGCTATTTTGATTGCTGCTCCCAACTGAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_220891	ILMN_234687	SDCCAG10	NM_026072.1	NM_026072.1		67285	110625680	NM_026072.1	Sdccag10	NP_080348.1	ILMN_2728254	006620025	S	1770	TGTAAATCTGGAATGATGTAAGAAAATGCTTTTGGTTACTGATACATTTT	13	-	105421471-105421520	13qD1	Mus musculus serologically defined colon cancer antigen 10 (Sdccag10), mRNA. XM_980999 XM_981042 XM_981078	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	NY-CO-10; 3110009E13Rik	NY-CO-10; 3110009E13Rik
Mus musculus	RefSeq	ILMN_220785	ILMN_220785	NPPB	NM_008726.3	NM_008726.3		18158	141803024	NM_008726.3	Nppb	NP_032752.1	ILMN_2726837	003360681	S	444	TAGGAAGACCTCCTGGCTGCAGGAGACTCCAGTTTCTGACTCTGCCTGGG	4	+	147361086-147361087:147361088-147361135	4qE2	Mus musculus natriuretic peptide precursor type B (Nppb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	AA408272; BNP	AA408272; BNP
Mus musculus	RefSeq	ILMN_218768	ILMN_314666	ERBB4	NM_010154.1	NM_010154.1		13869	146134397	NM_010154.1	Erbb4	NP_034284.1	ILMN_2699974	002120561	S	3510	CAGCACCATACCAGAGGCTCCAGTAGCTCAGGGTGCAACGGCTGAGATGT				1qC3	Mus musculus v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) (Erbb4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217823	ILMN_217823	OLFR1090	NM_146847.1	NM_146847.1		258844	22129168	NM_146847.1	Olfr1090	NP_667058.1	ILMN_1246170	006060746	S	800	CTGATGACAATGATAAGGTGTCTTCAATTTTTTACACCCTCGTTATACCC	2	-	86594044-86594093	2qD	Mus musculus olfactory receptor 1090 (Olfr1090), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR188-4	MOR188-4
Mus musculus	RefSeq	ILMN_220554	ILMN_313837	LOC100046781	XM_001476801.1	XM_001476801.1		100046781	149262206	XM_001476801.1	LOC100046781	XP_001476851.1	ILMN_1249142	004920075	S	3892	CTTGGGAGACACTGCAGTAAGAAGAGAAATTCCTTCCGCCTTCAAAGAGC					PREDICTED: Mus musculus similar to carboxypeptidase D (LOC100046781), mRNA.					
Mus musculus	RefSeq	ILMN_220554	ILMN_313837	LOC100046781	XM_001476801.1	XM_001476801.1		100046781	149262206	XM_001476801.1	LOC100046781	XP_001476851.1	ILMN_2727598	006940731	S	3927	CCGCCTTCAAAGAGCTTTGGGAAGTTAGCCTGCTAAATTCATACTCTCTG					PREDICTED: Mus musculus similar to carboxypeptidase D (LOC100046781), mRNA.					
Mus musculus	Riken	ILMN_206527	ILMN_206527	D930015M12RIK	ri|D930015M12|PX00201J18|AK086241|2704					AK086241	D930015M12Rik		ILMN_1222557	005960692	S	2223	CCCCACTAATATGTCAGCACATTTACAGGGAAGCAGGGCCTATCCTAGAG										
Mus musculus	RefSeq	ILMN_208704	ILMN_208704	ANK1	NM_031158.1	NM_031158.1		11733	13624296	NM_031158.1	Ank1	NP_112435.1	ILMN_2609011	003990600	S	1496	ACATCGCCTGCAAGAAGAACCACATCCGTGTAATGGAGTTGCTGCTGAAG	8	+	24205703-24205752	8qA2	Mus musculus ankyrin 1, erythroid (Ank1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	nb; Ank-1	nb; Ank-1
Mus musculus	RefSeq	ILMN_208704	ILMN_208704	ANK1	NM_031158.1	NM_031158.1		11733	13624296	NM_031158.1	Ank1	NP_112435.1	ILMN_2715601	001260255	S	7874	CGCTCCCGTTGCTAGTAGGAGCTGTTTTAGGAGGAGTTTGGGGTCTCCAC	8	+	24260696-24260745	8qA2	Mus musculus ankyrin 1, erythroid (Ank1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	nb; Ank-1	nb; Ank-1
Mus musculus	RefSeq	ILMN_220756	ILMN_220756	KCNH3	NM_010601.2	NM_010601.2		16512	46560566	NM_010601.2	Kcnh3	NP_034731.2	ILMN_2726397	007610142	S	3214	CTAGAGATGGTGCTCATTGGCTGCCACGGTCCTGGCACGGTCCAGTGGAC	15	+	99072879-99072928	15qF1	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 3 (Kcnh3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	C030044P22Rik; AU019351; Elk2; Melk2	C030044P22Rik; AU019351; Elk2; Melk2
Mus musculus	MEEBO	ILMN_209827	ILMN_209827	IGH-6	IGHM_V00818_Ig_heavy_constant_mu_941	XM_354710.1			38073786	XM_354710.1	Igh-6		ILMN_2744657	005340278	S	1557	ATGGAACTCCGGAGAGACCTATACCTGTGTTGTAGGCCACGAGGCCCTGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bound antigen receptor complex consisting in its basic form of an antigen-binding subunit (the membrane immunoglobulin or mIg), comprised of two identical heavy chains and two identical light chains held together by disulfide bonds, and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins [goid 19815] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A multi-subunit complex that functions as an antibody and circulates in the blood, lymph, mucosal areas, and other fluids of the body. In its basic form, circulating immunoglobulin is composed of two identical heavy chains and two identical light chains, held together by disulfide bonds. Some forms are polymers of the basic structure and contain additional components such as J-chain and the secretory component [goid 42571] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A multi-subunit complex that functions as an antibody and circulates in the blood, lymph, mucosal areas, and other fluids of the body. In its basic form, circulating immunoglobulin is composed of two identical heavy chains and two identical light chains, held together by disulfide bonds. Some forms are polymers of the basic structure and contain additional components such as J-chain and the secretory component [goid 42571] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A multi-subunit complex that functions as an antibody and circulates in the blood, lymph, mucosal areas, and other fluids of the body. In its basic form, circulating immunoglobulin is composed of two identical heavy chains and two identical light chains, held together by disulfide bonds. Some forms are polymers of the basic structure and contain additional components such as J-chain and the secretory component [goid 42571] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IDA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IDA]; The directed movement of substances, in membrane-bounded vesicles, from the early sorting endosomes to the late sorting endosomes; transport occurs along microtubules and can be experimentally blocked with microtubule-depolymerizing drugs [goid 45022] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of endocytosis [goid 45807] [evidence IDA]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of B cell activation [goid 50871] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of B cell activation [goid 50871] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]	Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IDA]		
Mus musculus	MEEBO	ILMN_209827	ILMN_209827	IGH-6	IGHM_V00818_Ig_heavy_constant_mu_941	XM_354710.1			38073786	XM_354710.1	Igh-6		ILMN_2744660	001010138	S	1560	GAACTCCGGAGAGACCTATACCTGTGTTGTAGGCCACGAGGCCCTGCCAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bound antigen receptor complex consisting in its basic form of an antigen-binding subunit (the membrane immunoglobulin or mIg), comprised of two identical heavy chains and two identical light chains held together by disulfide bonds, and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins [goid 19815] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A multi-subunit complex that functions as an antibody and circulates in the blood, lymph, mucosal areas, and other fluids of the body. In its basic form, circulating immunoglobulin is composed of two identical heavy chains and two identical light chains, held together by disulfide bonds. Some forms are polymers of the basic structure and contain additional components such as J-chain and the secretory component [goid 42571] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A multi-subunit complex that functions as an antibody and circulates in the blood, lymph, mucosal areas, and other fluids of the body. In its basic form, circulating immunoglobulin is composed of two identical heavy chains and two identical light chains, held together by disulfide bonds. Some forms are polymers of the basic structure and contain additional components such as J-chain and the secretory component [goid 42571] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A multi-subunit complex that functions as an antibody and circulates in the blood, lymph, mucosal areas, and other fluids of the body. In its basic form, circulating immunoglobulin is composed of two identical heavy chains and two identical light chains, held together by disulfide bonds. Some forms are polymers of the basic structure and contain additional components such as J-chain and the secretory component [goid 42571] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IDA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IDA]; The directed movement of substances, in membrane-bounded vesicles, from the early sorting endosomes to the late sorting endosomes; transport occurs along microtubules and can be experimentally blocked with microtubule-depolymerizing drugs [goid 45022] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of endocytosis [goid 45807] [evidence IDA]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of B cell activation [goid 50871] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of B cell activation [goid 50871] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]	Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IDA]		
Mus musculus	RefSeq	ILMN_219678	ILMN_219678	S100A6	NM_011313.2	NM_011313.2		20200	113930761	NM_011313.2	S100a6	NP_035443.1	ILMN_2712120	005080326	S	611	ATGAAGCTCTGAAATAAAATGGGACCGTTGAGATGACTTCCGGGGGCCTC	3	+	90418228-90418244:90418245-90418277	3qF1	Mus musculus S100 calcium binding protein A6 (calcyclin) (S100a6), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]	Cacy; PRA; CALCYCLIN; 2A9; 5B10	Cacy; PRA; CALCYCLIN; 2A9; 5B10
Mus musculus	RefSeq	ILMN_201014	ILMN_309912	LOC100041256	XM_001475559.1	XM_001475559.1		100041256	149273584	XM_001475559.1	LOC100041256	XP_001475609.1	ILMN_1254824	002190392	S	664	TTTTCTTCAGGTGAGGGATGTCCACCTCGCCAGCGCCCTGGTTTGCAGAG	Y|NT_166382.1	+	14602-14651		PREDICTED: Mus musculus hypothetical protein LOC100041256, transcript variant 2 (LOC100041256), mRNA.					
Mus musculus	Riken	ILMN_205584	ILMN_205584	B930095G10RIK	ri|B930095G10|PX00166M08|AK047586|1782					AK047586	B930095G10Rik		ILMN_1223843	002750370	S	1369	GGACGCAGTGGCTGCTGCAGAGGCCCTTTAGTATGCTGTAGCTCAGGATG										
Mus musculus	RefSeq	ILMN_234960	ILMN_234960	620807	NM_001081285.1	NM_001081285.1		620807	124486864	NM_001081285.1	620807	NP_001074754.1	ILMN_2953807	001850730	S	375	AATGAATGGGGAAACCTTCCAGCTGATGTCGCTCTATGGCCGAGAACCAG	4	+	60018417-60018454:60018794-60018805	4qB3	Mus musculus predicted gene, 620807 (620807), mRNA.					
Mus musculus	RefSeq	ILMN_185501	ILMN_185501	YTHDF3	NM_172677.2	NM_172677.2		229096	46048311	NM_172677.2	Ythdf3	NP_766265.2	ILMN_2513536	001580019	S	3326	GTTAAGGGTGAAAATAGCAATACAGTAGATTTGAATGTCTTTTTGATCTG	3	+	16115266-16115315	3qA1	Mus musculus YTH domain family 3 (Ythdf3), mRNA.				9130022A11Rik	9130022A11Rik
Mus musculus	RefSeq	ILMN_185501	ILMN_185501	YTHDF3	NM_172677.2	NM_172677.2		229096	46048311	NM_172677.2	Ythdf3	NP_766265.2	ILMN_1222497	007610121	S	2871	CTGGGTGTTTGCGAGCCTGATTGCTATCATGAAGTAAAAATTTATTACTC	3	+	16114811-16114860	3qA1	Mus musculus YTH domain family 3 (Ythdf3), mRNA.				9130022A11Rik	9130022A11Rik
Mus musculus	RefSeq	ILMN_185501	ILMN_185501	YTHDF3	NM_172677.2	NM_172677.2		229096	46048311	NM_172677.2	Ythdf3	NP_766265.2	ILMN_1258789	005700286	S	4674	TGAAAAGCTGTGTTATTTTTGACTACCATGCATGTGGGGTTAAGCTGATG	3	+	16116614-16116663	3qA1	Mus musculus YTH domain family 3 (Ythdf3), mRNA.				9130022A11Rik	9130022A11Rik
Mus musculus	MEEBO	ILMN_195664	ILMN_195664	1110028F11RIK	scl41081.3.1_13						1110028F11Rik		ILMN_2517566	003870279	S	11	CACCGGTCCATTTGGAGACAGCACCTGCCCCTTCTGAGCTTTTCAGCTAC										
Mus musculus	Riken	ILMN_204108	ILMN_204108	CD38	ri|A730096A03|PX00153B19|AK043442|883					AK043442	Cd38		ILMN_1236213	002120477	S	654	GGCTTGTGGTTTCCATCAGACACCGCCCCTGCCCAGAAAGTTAAGGTCAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose [goid 3953] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IMP];  [goid 16849] [evidence IMP]		
Mus musculus	RefSeq	ILMN_211398	ILMN_211398	PRDX6-RS1	NM_177256.3	NM_177256.3		320769	142385325	NM_177256.3	Prdx6-rs1	NP_796230.1	ILMN_1244647	001030672	S	2778	ATTAGAGAGGAAATACCATCCCTAGAGTATATAAGAAAAGATCAGAACTT	2	+	80135409-80135458	2qC3	Mus musculus peroxiredoxin 6, related sequence 1 (Prdx6-rs1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107184; Prdx5-rs1; Aop2-rs1; 4930414C22Rik	MGC107184; Prdx5-rs1; Aop2-rs1; 4930414C22Rik
Mus musculus	RefSeq	ILMN_211398	ILMN_211398	PRDX6-RS1	NM_177256.3	NM_177256.3		320769	142385325	NM_177256.3	Prdx6-rs1	NP_796230.1	ILMN_2733146	001940220	S	1501	GCTTCGGGGAATCCATTGTAAGTTTCTATCAAAATGGGCTCAGAAAGCCT	2	+	80134132-80134181	2qC3	Mus musculus peroxiredoxin 6, related sequence 1 (Prdx6-rs1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107184; Prdx5-rs1; Aop2-rs1; 4930414C22Rik	MGC107184; Prdx5-rs1; Aop2-rs1; 4930414C22Rik
Mus musculus	RefSeq	ILMN_211398	ILMN_211398	PRDX6-RS1	NM_177256.3	NM_177256.3		320769	142385325	NM_177256.3	Prdx6-rs1	NP_796230.1	ILMN_1239281	001450209	S	1150	GTGACATGATCACAGCCGGTCTTATAGATCACTTGCTATACTCCTGGGTC	2	+	80133781-80133830	2qC3	Mus musculus peroxiredoxin 6, related sequence 1 (Prdx6-rs1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC107184; Prdx5-rs1; Aop2-rs1; 4930414C22Rik	MGC107184; Prdx5-rs1; Aop2-rs1; 4930414C22Rik
Mus musculus	MEEBO	ILMN_223852	ILMN_223852	2010305A19RIK	scl25147.5_521				31541861	NM_027250	2010305A19Rik		ILMN_2770438	004390445	S	2747	CAACTGGAGGATACTGGTATCCTCAAAAAGTGGACCCATACTTTTGGTCT								The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194416	ILMN_194416	MYLK2	scl20104.7.1_242				51712778	XM_130630	Mylk2		ILMN_2506244	001090762	S	6	AACAGGATGAACTGGCCCACGAGGAGTATGAAGCCATCGGGCAGACCCCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + (myosin-light-chain) = ADP + (myosin-light-chain) phosphate [goid 4687] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220153	ILMN_220153	MFSD1	NM_025813.3	NM_025813.3		66868	146134989	NM_025813.3	Mfsd1	NP_080089.1	ILMN_2718284	005080139	S	2780	TAGCTCACTTTGATTTGTCAGGAATTTGTGGCATTGTGGGCTTGGGGTGT				3qE1	Mus musculus major facilitator superfamily domain containing 1 (Mfsd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	1200003O06Rik	1200003O06Rik
Mus musculus	MEEBO	ILMN_217990	ILMN_217990	MS4A1	scl52729.7_192	NM_007641.2			31543266	NM_007641.2	Ms4a1		ILMN_2690194	001780187	S	2653	CATCCAGTAGGTCTTTACTAAGTTCTGCCCACTTACAAGCCACAGCACGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200000	ILMN_200000	LOC381629	XM_355589.1	XM_355589.1			38079630	XM_355589.1	LOC381629		ILMN_1225264	006480189	S	332	GTCCTGAGAACGGATCTTGTGCATCTGACGGTCCTGGTCTTTTGCAGTGC										
Mus musculus	RefSeq	ILMN_193602	ILMN_250069	ZMYND17	XM_907249.2	XM_907249.2		74843	94396679	XM_907249.2	Zmynd17	XP_912342.3	ILMN_1244036	006860242	S	1530	CGCATCCCTCAAACCAGAACAAGTCTATTCTAATCCCAACAAGCAACCAG				14qA3	PREDICTED: Mus musculus zinc finger, MYND domain containing 17 (Zmynd17), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220439	ILMN_220439	HMG20B	NM_010440.2	NM_010440.2		15353	142365672	NM_010440.2	Hmg20b	NP_034570.1	ILMN_1232386	000460435	S	1436	AGGAGGACCCCAGGTCGCTCACCATACAGCCAGGGGACCTGCTGCGCAGG	10	-	80808917-80808966	10qC1	Mus musculus high mobility group 20 B (Hmg20b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A heterodimeric complex of BRCA2 and BRAF35 (BRCA2-associated factor 35). The BRCA2-BRAF35 complex is often associated with condensed chromatin during mitosis [goid 2111] [evidence ISA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA containing four-way junctions, also known as Holliday junctions, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices [goid 400] [evidence ISA]	Smarce1r; AW610687; Hmgx2; BRAF35	Smarce1r; AW610687; Hmgx2; BRAF35
Mus musculus	MEEBO	ILMN_194633	ILMN_194633	2610528B01RIK	scl24815.1.459_5						2610528B01Rik		ILMN_1242103	002030328	S	1	GCTCCAATAAGGGGCTTCCAGTCCATGTAGCAGCTGTGTCAGGATCTCAG										
Mus musculus	RefSeq	ILMN_196555	ILMN_250842	LOC636687	XM_912173.3	XM_912173.3		636687	149258834	XM_912173.3	LOC636687	XP_917266.2	ILMN_1223215	000670577	S	22	GGTTGGGTCTGGAACCAGTTCTTTGTGATGGACGAGTACACTGGGCCCGA					PREDICTED: Mus musculus similar to 6820431F20Rik protein (LOC636687), mRNA.					
Mus musculus	RefSeq	ILMN_201082	ILMN_201082	LOC385022	XM_357998.1	XM_357998.1			38088933	XM_357998.1	LOC385022		ILMN_1222457	007150022	S	2	TGAGGCAGCCTCTGCCCCAAAAATCTAAAACAGCACCCACTGGAGTTGCG										
Mus musculus	RefSeq	ILMN_210601	ILMN_210601	MON1A	NM_028369.2	NM_028369.2		72825	142363576	NM_028369.2	Mon1a	NP_082645.1	ILMN_2607297	003870577	S	1828	GCGCCATCCATAAGCTGATGCGCTGGATCCGTAAAGAGGAAGACCGTCTC	9	+	107805256-107805305	9qF1	Mus musculus MON1 homolog A (yeast) (Mon1a), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; The regulated release of proteins from a cell or group of cells [goid 9306] [evidence IMP]		2810468K17Rik	2810468K17Rik
Mus musculus	RefSeq	ILMN_210601	ILMN_210601	MON1A	NM_028369.2	NM_028369.2		72825	142363576	NM_028369.2	Mon1a	NP_082645.1	ILMN_2734370	001050598	S	490	ACATGCGCCAGATTAGCCAGGACTTCAGCGAGCTAAGCACCCAGCTGACC	9	+	107802486-107802535	9qF1	Mus musculus MON1 homolog A (yeast) (Mon1a), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; The regulated release of proteins from a cell or group of cells [goid 9306] [evidence IMP]		2810468K17Rik	2810468K17Rik
Mus musculus	RefSeq	ILMN_217019	ILMN_217019	GARS	NM_180678.3	NM_180678.3		353172	93102416	NM_180678.3	Gars	NP_851009.2	ILMN_2678200	001230632	S	2304	GCATCCAGGGACGGTTTTTCCTCAGTGGCTGCTTGGTTTTACTCCCACAA	6	+	55029412-55029461	6qB3	Mus musculus glycyl-tRNA synthetase (Gars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]	A process of exocytosis in which soluble proteins and other substances are initially stored in secretory vesicles for later release. It is found mainly in cells that are specialized for secreting products such as hormones, neurotransmitters, or digestive enzymes rapidly on demand [goid 45055] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling glycine to glycyl-tRNA, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6426] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly) [goid 4820] [evidence IEA]	Nmf249; Sgrp23	Nmf249; Sgrp23
Mus musculus	RefSeq	ILMN_188218	ILMN_217019	GARS	NM_180678.3	NM_180678.3		353172	93102416	NM_180678.3	Gars	NP_851009.2	ILMN_2450786	003840161	S	1763	GATCCTGCCCAAGCCAAAGGAGGGCTCAATTACACTCGGAACAACTTCTT	6	+	55025428-55025477	6qB3	Mus musculus glycyl-tRNA synthetase (Gars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]	A process of exocytosis in which soluble proteins and other substances are initially stored in secretory vesicles for later release. It is found mainly in cells that are specialized for secreting products such as hormones, neurotransmitters, or digestive enzymes rapidly on demand [goid 45055] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling glycine to glycyl-tRNA, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6426] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly) [goid 4820] [evidence IEA]	Nmf249; Sgrp23	Nmf249; Sgrp23
Mus musculus	RefSeq	ILMN_192737	ILMN_252483	C030037D09RIK	XM_972794.1	XM_972794.1		193280	94391824	XM_972794.1	C030037D09Rik	XP_977888.1	ILMN_1249785	001110754	S	1160	TGGGACCTTTCAACATTCTCTATGGTCATTCTGAACACCCGCACCCTGCC					PREDICTED: Mus musculus RIKEN cDNA C030037D09 gene (C030037D09Rik), mRNA.					
Mus musculus	MEEBO	ILMN_192463	ILMN_192463	A730020E08RIK	scl00320902.1_236				51712003	XM_489138	A730020E08Rik		ILMN_2488301	007570347	S	4	AAGATGGGGTCATGAAAGACTTGCTCATCATTATATCTCTGAAGCGCTGT										
Mus musculus	RefSeq	ILMN_221684	ILMN_249766	OLFR584	NM_147054.1	NM_147054.1		259056	22128846	NM_147054.1	Olfr584	NP_667265.1	ILMN_2739006	004050291	S	898	GGAGTTAGAACCAAACAGATCAGAGACAGGGTTACCCGAGGGTTTTGTGT	7	+	110234931-110234980	7qE3	Mus musculus olfactory receptor 584 (Olfr584), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR30-2; MGC157596	MOR30-2; MGC157596
Mus musculus	RefSeq	ILMN_192585	ILMN_228727	SNHG10	NR_003145.2	NR_003145.2		69434	141803286	NR_003145.2	Snhg10		ILMN_1220023	001230519	S	411	CGGCAGAGTGTCAGTTAAATCGCCCCAGCGCCCGGAAGCTTTTATTCATG	12	-	106268895-106268944	12qE	Mus musculus small nucleolar RNA host gene (non-protein coding) 10 (Snhg10), non-coding RNA.				1700026B20Rik; AI642517	1700026B20Rik; AI642517
Mus musculus	Riken	ILMN_206570	ILMN_206570	C430003P19RIK	ri|C430003P19|PX00078G02|AK082887|1224					AK082887	C430003P19Rik		ILMN_1237228	001090349	S	826	AGTATGAGAGACTGGCTCTGTTCACTGTGGGGGGACTGTGCCTGAGCACA										
Mus musculus	RefSeq	ILMN_207480	ILMN_207480	HERC2	XM_149944.1	XM_149944.1			20830158	XM_149944.1	Herc2		ILMN_2587803	002340379	I	449	GCCAGCTCAGCAAAGCCATACCTCAGCAACCAGCTCCTTGGTAAACTACC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]		
Mus musculus	Riken	ILMN_203106	ILMN_203106	4833441B18RIK	ri|4833441B18|PX00028N12|AK029458|1011					AK029458	4833441B18Rik		ILMN_1219467	007550154	S	287	GGAGATGGCTCTTGGACAAATCCGAGCAGTACCACACACTGGGAGGGAAT										
Mus musculus	RefSeq	ILMN_209664	ILMN_209664	CDKN1A	NM_007669.2	NM_007669.2		12575	31542370	NM_007669.2	Cdkn1a	NP_031695.1	ILMN_2846776	002070377	S	1428	TGGCAACCCCCTGCATTGTGGGTCTAGGGTGGGTCCTTGGTGGTGAGACA	17	+	28827907-28827956	17qA3.3	Mus musculus cyclin-dependent kinase inhibitor 1A (P21) (Cdkn1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of non-apoptotic programmed cell death, cell death resulting from activation of endogenous cellular processes, by a mechanism other than apoptosis [goid 43071] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with cyclins, proteins whose levels in a cell varies markedly during the cell cycle, rising steadily until mitosis, then falling abruptly to zero. As cyclins reach a threshold level, they are thought to drive cells into G2 phase and thus to mitosis [goid 30332] [evidence IPI]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mda6; p21Cip1; P21; Cdkn1; p21WAF; Waf1; SDI1; CIP1; CDKI; CAP20	mda6; p21Cip1; P21; Cdkn1; p21WAF; Waf1; SDI1; CIP1; CDKI; CAP20
Mus musculus	RefSeq	ILMN_209664	ILMN_209664	CDKN1A	NM_007669.2	NM_007669.2		12575	31542370	NM_007669.2	Cdkn1a	NP_031695.1	ILMN_2846775	007040491	S	1611	CTTGGGGGCTAAGGGAGCTCACAGGACACTGAGCAATGGCTGATCCTTTC	17	+	28828090-28828139	17qA3.3	Mus musculus cyclin-dependent kinase inhibitor 1A (P21) (Cdkn1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of non-apoptotic programmed cell death, cell death resulting from activation of endogenous cellular processes, by a mechanism other than apoptosis [goid 43071] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with cyclins, proteins whose levels in a cell varies markedly during the cell cycle, rising steadily until mitosis, then falling abruptly to zero. As cyclins reach a threshold level, they are thought to drive cells into G2 phase and thus to mitosis [goid 30332] [evidence IPI]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mda6; p21Cip1; P21; Cdkn1; p21WAF; Waf1; SDI1; CIP1; CDKI; CAP20	mda6; p21Cip1; P21; Cdkn1; p21WAF; Waf1; SDI1; CIP1; CDKI; CAP20
Mus musculus	Riken	ILMN_204735	ILMN_204735	B930034F23RIK	ri|B930034F23|PX00163P06|AK047196|2733					AK047196	B930034F23Rik		ILMN_2567229	002230441	S	2244	TCTCCAAGGGTGACTGGTGTGAATGGCTCCCTGCTGTGAGGGCCTCTGTG										
Mus musculus	RefSeq	ILMN_210431	ILMN_210431	SGCD	NM_011891.4	NM_011891.4		24052	146134414	NM_011891.4	Sgcd	NP_036021.1	ILMN_2696134	007000537	S	1319	CACCAAGCTTCTCTTGTAGAGTCATTAGAGGCAGTGATGGCGGGAATCTT				11qB1.1	Mus musculus sarcoglycan, delta (dystrophin-associated glycoprotein) (Sgcd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	35kDa; delta-SG	35kDa; delta-SG
Mus musculus	RefSeq	ILMN_209972	ILMN_209972	RWDD2B	NM_016924.2	NM_016924.2		53858	119360351	NM_016924.2	Rwdd2b	NP_058620.2	ILMN_1239330	000770372	S	1892	GGCCCCTGAAGTGATGGCAAGAGAAAGGGCCAAGCTATCTCAGAGATGTC	16	-	87433738-87433787	16qC3.3	Mus musculus RWD domain containing 2B (Rwdd2b), mRNA.				ORF5	ORF5
Mus musculus	MEEBO	ILMN_223787	ILMN_223787	4930455F23RIK	scl17282.7.92_117				30794177	NM_029115	4930455F23Rik		ILMN_2769153	004780356	S	1679	CCAAGGCTTTCCGCTTCACCGACCACTACAACTGAAGCCACCCGGGAAAG										
Mus musculus	MEEBO	ILMN_212477	ILMN_212477	1700024D23RIK	scl072258.2_0	NM_029911.1			19882234	NM_029911.1	1700024D23Rik		ILMN_1251505	006620543	S	409	TCCGTTGGTCTGTTTAACCGACGAGTTGTAAATCTTGAAGACTTTATTAT										
Mus musculus	MEEBO	ILMN_208687	ILMN_208687	2610002D18RIK	scl24844.4_405	XM_131720.2			28498346	XM_131720.2	2610002D18Rik		ILMN_1221445	002070328	S	1079	CCAGGACTCTGAGGGTAATCGGGTTATCAGGCACTAGTTCTAGATGCTTA										
Mus musculus	RefSeq	ILMN_214427	ILMN_214427	KIF1B	NM_207682.2	NM_207682.2		16561	86990459	NM_207682.2	Kif1b	NP_997565.2	ILMN_1239729	001510553	S	10019	ATCTAACTGTGTATGGTAACCTTGCATCACAGAACTGCTAGTGAACGAGG	4	-	148550460-148550509	4qE2	Mus musculus kinesin family member 1B (Kif1b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence NAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence TAS]	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204
Mus musculus	RefSeq	ILMN_214427	ILMN_214427	KIF1B	NM_207682.2	NM_207682.2		16561	86990459	NM_207682.2	Kif1b	NP_997565.2	ILMN_2654314	003390722	S	8081	GACCTCATTAGAAAGCCAGGGAAAGTAAGGTTGGAGCTTGGGCACCTGTG	4	-	148552398-148552447	4qE2	Mus musculus kinesin family member 1B (Kif1b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence NAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence TAS]	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204
Mus musculus	RefSeq	ILMN_214427	ILMN_214427	KIF1B	NM_207682.2	NM_207682.2		16561	86990459	NM_207682.2	Kif1b	NP_997565.2	ILMN_2647921	004480114	S	5557	GACATGAATGACTGGTTATATGCCTTTAACCCACTTCTGGCTGGCACAAT	4	-	148555595-148555644	4qE2	Mus musculus kinesin family member 1B (Kif1b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence NAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence TAS]	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204
Mus musculus	RefSeq	ILMN_214427	ILMN_214427	KIF1B	NM_207682.2	NM_207682.2		16561	86990459	NM_207682.2	Kif1b	NP_997565.2	ILMN_2670778	006400672	S	9743	GAGTGGCGTCTCCTGTCACCATCCCCATGCTATAACAGAATCCATGAAGC	4	-	148550736-148550785	4qE2	Mus musculus kinesin family member 1B (Kif1b), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence NAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence TAS]	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204	mKIAA0591; KIF1Bp130; AI506502; D4Mil1e; A530096N05Rik; AI448212; KIF1Bp204
Mus musculus	RefSeq	ILMN_200286	ILMN_200286	LOC386136	XM_359087.1	XM_359087.1			38081220	XM_359087.1	LOC386136		ILMN_1225822	003870440	S	489	CCTAAAGCCCCGGTGGCCCAGTGTGGATCTCAAAATAATAGGCGTGCCTG										
Mus musculus	MEEBO	ILMN_208721	ILMN_208721	C530050E15RIK	scl0320489.1_63				51767585	XM_488665	C530050E15Rik		ILMN_2588897	007100768	S	1205	CCTCATGGGTGTTCTGCTCAACAAGCAAGTCCCTAATGCATCAATCCGTA										
Mus musculus	MEEBO	ILMN_208721	ILMN_208721	C530050E15RIK	scl0320489.1_63				51767585	XM_488665	C530050E15Rik		ILMN_2588898	006980768	S	1206	CTCATGGGTGTTCTGCTCAACAAGCAAGTCCCTAATGCATCAATCCGTAC										
Mus musculus	RefSeq	ILMN_191916	ILMN_246816	ATP4A	NM_018731.2	NM_018731.2		11944	110225336	NM_018731.2	Atp4a	NP_061201.2	ILMN_1242979	002320673	S	2761	CCAGCAGTACACCTGTTACACCGTGTTCTTCATCAGCATCGAGATGTGCC	7	+	31509232-31509281	7qB1	Mus musculus ATPase, H+/K+ exchanging, gastric, alpha polypeptide (Atp4a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that modulates the frequency, rate or extent of proton transport into, out of, within or between cells [goid 10155] [evidence IDA]; Any process that reduces the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 45851] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a inorganic cations with a valency of one from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage [goid 15077] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) + K+(out) = ADP + phosphate + H+(out) + K+(in) [goid 8900] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209572	ILMN_209572	ACLY	NM_134037.2	NM_134037.2		104112	40254106	NM_134037.2	Acly	NP_598798.1	ILMN_1240770	007050274	S	4108	GCTGTGAAATGTCTTGTGTCAGTGTCCTCTGTGTTCATGCAGCCGACTTG	11	-	100337806-100337855	11qD	Mus musculus ATP citrate lyase (Acly), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence TAS]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated [goid 6085] [evidence TAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ADP + phosphate + acetyl-CoA + oxaloacetate = ATP + citrate + CoA [goid 3878] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer [goid 46912] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate [goid 4775] [evidence IEA]	AW538652; A730098H14Rik	AW538652; A730098H14Rik
Mus musculus	Riken	ILMN_204178	ILMN_204178	A830003F04RIK	ri|A830003F04|PX00153O06|AK043510|2132					AK043510	A830003F04Rik		ILMN_1219524	000830068	S	1813	CGTCCTTCCACCATCTCAAGAATCCAGGCTTACTTTGCTGCAGTCTACCC										
Mus musculus	RefSeq	ILMN_256404	ILMN_256404	BUB1B	NM_009773.1	NM_009773.1		12236	6753211	NM_009773.1	Bub1b	NP_033903.1	ILMN_2985969	005910528	S	3263	CCCTGTGGAAGCTGGGGAAGACAATCAGCCCGGAAGCTTTGCTCACTCAG	2	+	118332672-118332721	2qE5	Mus musculus budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae) (Bub1b), mRNA.	A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]; The region of a condensed chromosome kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions [goid 940] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC36092; BUBR1; AU045529	MGC36092; BUBR1; AU045529
Mus musculus	RefSeq	ILMN_218161	ILMN_218161	CIZ1	NM_028412.1	NM_028412.1		68379	19882246	NM_028412.1	Ciz1	NP_082688.1	ILMN_2692421	000150762	S	2642	GCTCAGTCTGCTAATGCTTCCTAGGTATCTGTGTAGAAATGTTCAAGTGG	2	+	32233724-32233773	2qB	Mus musculus CDKN1A interacting zinc finger protein 1 (Ciz1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	0610038H21Rik; 2900056O04Rik; LSFR1; ZNF356	0610038H21Rik; 2900056O04Rik; LSFR1; ZNF356
Mus musculus	RefSeq	ILMN_201607	ILMN_218161	CIZ1	NM_028412.1	NM_028412.1		68379	19882246	NM_028412.1	Ciz1	NP_082688.1	ILMN_1253084	006770577	S	955	ATCCGGGGTCTGTGTCTGCTTTGGTGCTGTCATCTGGGTCTGAGGCTGGA	2	+	32226483-32226532	2qB	Mus musculus CDKN1A interacting zinc finger protein 1 (Ciz1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	0610038H21Rik; 2900056O04Rik; LSFR1; ZNF356	0610038H21Rik; 2900056O04Rik; LSFR1; ZNF356
Mus musculus	RefSeq	ILMN_218161	ILMN_218161	CIZ1	NM_028412.1	NM_028412.1		68379	19882246	NM_028412.1	Ciz1	NP_082688.1	ILMN_2760080	002100743	S	293	CACTCGACCTCCCTGCTCAATGGCCCCATGCTGCAAAGAGCTTTGCTCCT	2	+	32219791-32219840	2qB	Mus musculus CDKN1A interacting zinc finger protein 1 (Ciz1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	0610038H21Rik; 2900056O04Rik; LSFR1; ZNF356	0610038H21Rik; 2900056O04Rik; LSFR1; ZNF356
Mus musculus	RefSeq	ILMN_204767	ILMN_312440	LOC100040573	XM_001475151.1	XM_001475151.1		100040573	149264807	XM_001475151.1	LOC100040573	XP_001475201.1	ILMN_1257952	007160091	S	1075	CAGCTGTCACATGTGAAGGACTTGTTCCATTGTGAGAAATGTAACCGTTC	13|NT_166323.1	+	27153-27202		PREDICTED: Mus musculus similar to putative transcription factor ZNF131, transcript variant 3 (LOC100040573), mRNA.					
Mus musculus	Riken	ILMN_202095	ILMN_202095	MGEA5	ri|2810009A20|ZX00064H05|AK012695|379					AK012695	Mgea5		ILMN_2546960	001340731	S	36	TGGTCCGACCCAGAGTGTGGCGCTCATCCCGGAGGGTGGCGAGCCAAAAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212061	ILMN_212061	BRF2	NM_025686.2	NM_025686.2		66653	142347833	NM_025686.2	Brf2	NP_079962.1	ILMN_1258583	001070541	S	1292	GCAGCCATGCGTGTCCCTAACCCTCCCTGATGCACGTTCTTTAAGGTGTC	8	-	28234345-28234365:28234366-28234394	8qA2	Mus musculus BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like (Brf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AU022602; 5730512K07Rik; TFIIIB50; 2700059M06Rik; AU018504; BRFU	AU022602; 5730512K07Rik; TFIIIB50; 2700059M06Rik; AU018504; BRFU
Mus musculus	RefSeq	ILMN_193493	ILMN_260911	BC019943	NM_144927.2	NM_144927.2		234138	31542189	NM_144927.2	BC019943	NP_659176.2	ILMN_1224234	004390707	S	2808	GGCCACAAGCCATTCTTTATCCCACAGAGCTCACCTCAAAGTCACTCAGG	8	+	32271198-32271247	8qA3	Mus musculus cDNA sequence BC019943 (BC019943), mRNA.				MGC28346	MGC28346
Mus musculus	RefSeq	ILMN_199230	ILMN_228978	LRRC37A	XM_906537.3	XM_906537.3		237954	149262655	XM_906537.3	Lrrc37a	XP_911630.3	ILMN_1220636	002490112	S	9986	GGCCTCTGCACGACACCCGAAAGAAAAACATGGCTCAAGACCTTCAGGAC				11qE1	PREDICTED: Mus musculus leucine rich repeat containing 37A (Lrrc37a), mRNA.					
Mus musculus	RefSeq	ILMN_234920	ILMN_234920	P2RY12	NM_027571.2	NM_027571.2		70839	31980658	NM_027571.2	P2ry12	NP_081847.2	ILMN_2840082	001440050	S	2118	GTGCCATTATCGGTACTTATCTGCTAACTAGCTTTGAAAATGCCTGCTGC	3	-	59020419-59020468	3qD	Mus musculus purinergic receptor P2Y, G-protein coupled 12 (P2ry12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 43270] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IMP];  [goid 1621] [evidence IMP]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	4921504D23Rik; P2Y12; 2900079B22Rik	4921504D23Rik; P2Y12; 2900079B22Rik
Mus musculus	MEEBO	ILMN_215351	ILMN_215351	ATP6V0A1	scl011975.20_15	NM_016920.1			12025531	NM_016920.1	Atp6v0a1		ILMN_1247682	007550041	S	3817	TGGTGACCTTGTTTGAACCCCTCTGTCCTTTTGTGCCCGGTTACGTGATC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]		
Mus musculus	RefSeq	ILMN_227272	ILMN_227272	NDP52	NM_029755.1	NM_029755.1		76815	110626077	NM_029755.1	Ndp52	NP_084031.1	ILMN_2858587	006510025	S	675	GGAGGAAGAGAAGGCCTCCTGGGAGGAAGTGAAGGCCTATTGGTGGAATG				11qD	Mus musculus nuclear domain 10 protein 52 (Ndp52), mRNA. XM_989530 XM_989588 XM_992279 XM_992355				C77254; Ndp52l1; 2410154J16Rik	C77254; Ndp52l1; 2410154J16Rik
Mus musculus	Riken	ILMN_203122	ILMN_203122	6230421I24RIK	ri|6230421I24|PX00042J15|AK031780|2475					AK031780	6230421I24Rik		ILMN_1243220	006370102	S	2211	GGGAAGAAAGTAGAGAGCTGGAGAAAGGGAGGAAGGGCAAGAGAGAATCG										
Mus musculus	RefSeq	ILMN_213571	ILMN_213571	HNRNPK	NM_025279.2	NM_025279.2		15387	142350515	NM_025279.2	Hnrnpk	NP_079555.1	ILMN_1245987	002970408	S	502	CACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA	13	-	58497550-58497599	13qB1	Mus musculus heterogeneous nuclear ribonucleoprotein K (Hnrnpk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	hnRNPK; MGC102032; NOVA	hnRNPK; MGC102032; NOVA
Mus musculus	RefSeq	ILMN_213571	ILMN_213571	HNRNPK	NM_025279.2	NM_025279.2		15387	142350515	NM_025279.2	Hnrnpk	NP_079555.1	ILMN_2708776	001660360	S	1912	GTGTGCAGAATGTAATGCTCTTTTGTAAGAAACGTTTTATGATTTTTAAA	13	-	58493328-58493377	13qB1	Mus musculus heterogeneous nuclear ribonucleoprotein K (Hnrnpk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	hnRNPK; MGC102032; NOVA	hnRNPK; MGC102032; NOVA
Mus musculus	RefSeq	ILMN_215740	ILMN_215740	AIF1	NM_019467.2	NM_019467.2		11629	31980923	NM_019467.2	Aif1	NP_062340.1	ILMN_2804487	001400672	S	682	TGTATGAGGAGAAAAACAAAGAACACAAGAGGCCAACTGGTCCCCCAGCC	17	-	35309577-35309626	17qB1	Mus musculus allograft inflammatory factor 1 (Aif1), mRNA.	A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome [goid 1891] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	G1; AIF-1; D17H6S50E; AI607846; Iba1	G1; AIF-1; D17H6S50E; AI607846; Iba1
Mus musculus	RefSeq	ILMN_215740	ILMN_215740	AIF1	NM_019467.2	NM_019467.2		11629	31980923	NM_019467.2	Aif1	NP_062340.1	ILMN_1218123	000290068	S	802	GATGACAGCAGCATGGAAAAAAGAAACAGTCGTGAGCCAGAGTCAGACTA	17	-	35309463-35309465:35309460-35309484:35309485-35309506	17qB1	Mus musculus allograft inflammatory factor 1 (Aif1), mRNA.	A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome [goid 1891] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	G1; AIF-1; D17H6S50E; AI607846; Iba1	G1; AIF-1; D17H6S50E; AI607846; Iba1
Mus musculus	RefSeq	ILMN_215740	ILMN_215740	AIF1	NM_019467.2	NM_019467.2		11629	31980923	NM_019467.2	Aif1	NP_062340.1	ILMN_1212938	003940561	S	289	CTAAGACAACCAGCGTCTGAGGAGCCATGAGCCAAAGCAGGGATTTGCAG	17	-	35310433-35310482	17qB1	Mus musculus allograft inflammatory factor 1 (Aif1), mRNA.	A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome [goid 1891] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	G1; AIF-1; D17H6S50E; AI607846; Iba1	G1; AIF-1; D17H6S50E; AI607846; Iba1
Mus musculus	RefSeq	ILMN_187282	ILMN_314721	LOC100045697	XR_031796.1	XR_031796.1		100045697	149268982	XR_031796.1	LOC100045697		ILMN_1255772	002340520	S	643	CCGAACCTTCAGCTTTCTTGGCTTTGAGATTGTGAGACCCGGGCATCCCC					PREDICTED: Mus musculus similar to ornithine decarboxylase antizyme (LOC100045697), misc RNA.					
Mus musculus	RefSeq	ILMN_199222	ILMN_234941	GM885	NM_001033435.2	NM_001033435.2		380732	141803484	NM_001033435.2	Gm885	NP_001028607.1	ILMN_1254343	007650228	S	457	CCGGCTGTCACTGTTGCTCCCAGGGCTGTTACTGGGGATACTGGTAATAG	11	+	106622519-106622568	11qE1	Mus musculus gene model 885, (NCBI) (Gm885), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_250777	ILMN_250777	EMILIN2	NM_145158.2	NM_145158.2		246707	34328358	NM_145158.2	Emilin2	NP_660140.1	ILMN_2981363	005910164	S	3866	TCGAAGTTCTTGGGTTGAATCTACTTGGTGCTGTTCCGACTGGCCTGGGC	17	-	71601794-71601843	17qE1.3	Mus musculus elastin microfibril interfacer 2 (Emilin2), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FOAP-10	FOAP-10
Mus musculus	MEEBO	ILMN_212402	ILMN_212402	1700017G19RIK	scl22219.7.1_158				51707612	XM_485224	1700017G19Rik		ILMN_2626012	002760253	S	2180	ACGGGGAGGCTCTTGTGACAAATAACTTCACAAGTGACAGCCAAGAAAAG										
Mus musculus	MEEBO	ILMN_185471	ILMN_185471	RASGRP4	scl32847.13_506				21553108	NM_145149	Rasgrp4		ILMN_2427292	006250086	S	19	AAATCTCAGAAGGGGTTGACCATGTGAGAACTAGAGCCTGGCCGACAATC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190283	ILMN_190283	UXS1	NM_026430.1	NM_026430.1		67883	28076898	NM_026430.1	Uxs1	NP_080706.1	ILMN_2468778	003450255	S	1803	TTTCTCTTTTAATTCAGAGTTTTCTGAAGGTCTAGTTTTCAGTTGCAAAC	1	-	43806526-43806575	1qC1.1	Mus musculus UDP-glucuronate decarboxylase 1 (Uxs1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: UDP-D-glucuronic acid = UDP-D-xylose + CO2 [goid 48040] [evidence IEA]	AW550562; AI649125; AI451869; 1600025I13Rik	AW550562; AI649125; AI451869; 1600025I13Rik
Mus musculus	RefSeq	ILMN_209475	ILMN_209475	ISG20L1	NM_026531.2	NM_026531.2		68048	31541920	NM_026531.2	Isg20l1	NP_080807.2	ILMN_2924088	004880544	S	2523	GTCACACGTTCGGTCACTTCCTCTCTTGCTATTGTGAATAAGATAGCCGT	7	+	78782289-78782338	7qD3	Mus musculus interferon stimulated exonuclease gene 20-like 1 (Isg20l1), mRNA.				2700083B06Rik	2700083B06Rik
Mus musculus	RefSeq	ILMN_209475	ILMN_209475	ISG20L1	NM_026531.2	NM_026531.2		68048	31541920	NM_026531.2	Isg20l1	NP_080807.2	ILMN_2924083	006480563	S	2400	GTAACTCCTTATGGAACTCAGGCGATCCTCCTGCCTTAGCCCACCCAGGG	7	+	78782166-78782215	7qD3	Mus musculus interferon stimulated exonuclease gene 20-like 1 (Isg20l1), mRNA.				2700083B06Rik	2700083B06Rik
Mus musculus	RefSeq	ILMN_209174	ILMN_209174	MELK	NM_010790.2	NM_010790.2		17279	31981625	NM_010790.2	Melk	NP_034920.2	ILMN_2593241	002650347	S	2775	CCCCATGAAATGTTACTTTATGGTAATCTCTAAGTCTCAACGATGGCCCC	4	+	44377408-44377457	4qB1	Mus musculus maternal embryonic leucine zipper kinase (Melk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISA]	mKIAA0175; AI327312; MPK38	mKIAA0175; AI327312; MPK38
Mus musculus	RefSeq	ILMN_209174	ILMN_209174	MELK	NM_010790.2	NM_010790.2		17279	31981625	NM_010790.2	Melk	NP_034920.2	ILMN_1231392	004210671	S	528	GTCTTCCGTCAGATACTGTCTGCAGTTGCGTATGTCCACAGCCAGGGCTA	4	+	44321850-44321899	4qB1	Mus musculus maternal embryonic leucine zipper kinase (Melk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISA]	mKIAA0175; AI327312; MPK38	mKIAA0175; AI327312; MPK38
Mus musculus	RefSeq	ILMN_209174	ILMN_209174	MELK	NM_010790.2	NM_010790.2		17279	31981625	NM_010790.2	Melk	NP_034920.2	ILMN_3001043	002140156	S	2729	TCAGTAAGTATGTCCAGTCAACAATGATAAGTATCCGAACTGCAGGCCCC	4	+	44377362-44377411	4qB1	Mus musculus maternal embryonic leucine zipper kinase (Melk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISA]	mKIAA0175; AI327312; MPK38	mKIAA0175; AI327312; MPK38
Mus musculus	RefSeq	ILMN_220573	ILMN_220573	E2F6	NM_033270.1	NM_033270.1		50496	15149490	NM_033270.1	E2f6	NP_150373.1	ILMN_2791963	001690189	S	2058	ACCTCAGTGGGTAAGTCACTTACCTCTCTGTGCCTCAATTGCCTCAGTCA	12	+	16833249-16833298	12qA1.1	Mus musculus E2F transcription factor 6 (E2f6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that regulates transcription such that the target genes are transcribed during the G1/S phase of the mitotic cell cycle [goid 83] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AI462434; E2F6b; EMA	AI462434; E2F6b; EMA
Mus musculus	RefSeq	ILMN_220573	ILMN_220573	E2F6	NM_033270.1	NM_033270.1		50496	15149490	NM_033270.1	E2f6	NP_150373.1	ILMN_2734152	000540113	S	1224	AGCCAGTAGTGTTCTCCCGAGTCGCCTCCAGCACGGGGTCCTGATGGGTT	12	+	16832415-16832464	12qA1.1	Mus musculus E2F transcription factor 6 (E2f6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that regulates transcription such that the target genes are transcribed during the G1/S phase of the mitotic cell cycle [goid 83] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AI462434; E2F6b; EMA	AI462434; E2F6b; EMA
Mus musculus	RefSeq	ILMN_220573	ILMN_220573	E2F6	NM_033270.1	NM_033270.1		50496	15149490	NM_033270.1	E2f6	NP_150373.1	ILMN_2723931	006590053	S	2267	CAGGAGTCTGGGAAGCATCGTTAGTTTGGTAAACCTCTCCTGCTTTACAA	12	+	16833458-16833507	12qA1.1	Mus musculus E2F transcription factor 6 (E2f6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that regulates transcription such that the target genes are transcribed during the G1/S phase of the mitotic cell cycle [goid 83] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AI462434; E2F6b; EMA	AI462434; E2F6b; EMA
Mus musculus	RefSeq	ILMN_199615	ILMN_199615	LOC382801	XM_356684.1	XM_356684.1			38075115	XM_356684.1	LOC382801		ILMN_1245814	004730500	S	516	CTCAAGGTCTGTTCTGGAGTCCACTTGTCCTCCAAGAGAAGCTACTGCTG										
Mus musculus	Riken	ILMN_202895	ILMN_202895	6430518K01RIK	ri|6430518K01|PX00045H06|AK032312|2590					AK032312	6430518K01Rik		ILMN_2553138	000730341	S	2325	CCAGGAGCTCTGGAGACAAAGAGGACATCCAGTCAAGTTTCGAAAACCCA										
Mus musculus	RefSeq	ILMN_201317	ILMN_201317	LOC382425	XM_356499.1	XM_356499.1			38090772	XM_356499.1	LOC382425		ILMN_1241762	004850376	S	167	AGATGCAGGCCAGCAATGCAAAGGCAGCAGGGGCCAAAGCTCCAGCTAAG										
Mus musculus	RefSeq	ILMN_193920	ILMN_217979	HNRPDL	NM_016690.4	NM_016690.4		50926	148664249	NM_016690.4	Hnrpdl	NP_057899.2	ILMN_2501670	001470343	S	1692	AGGGGGTATTGGTCCACAGGAAGAAACTGGTTGTAGTATCCCCTGGTTTC				5qE4	Mus musculus heterogeneous nuclear ribonucleoprotein D-like (Hnrpdl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [evidence ISA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	hnRNP-DL; AA407431; JKTBP; D5Ertd650e; D5Wsu145e; AA959857	hnRNP-DL; AA407431; JKTBP; D5Ertd650e; D5Wsu145e; AA959857
Mus musculus	RefSeq	ILMN_217979	ILMN_217979	HNRPDL	NM_016690.4	NM_016690.4		50926	148664249	NM_016690.4	Hnrpdl	NP_057899.2	ILMN_2774965	002320685	S	1527	AATGTGGATTTGTGTTCATACAAATTTTTATTTGTGTGGTTTCATGTTAA				5qE4	Mus musculus heterogeneous nuclear ribonucleoprotein D-like (Hnrpdl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [evidence ISA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	hnRNP-DL; AA407431; JKTBP; D5Ertd650e; D5Wsu145e; AA959857	hnRNP-DL; AA407431; JKTBP; D5Ertd650e; D5Wsu145e; AA959857
Mus musculus	MEEBO	ILMN_215076	ILMN_215076	2310047H23RIK	scl44722.4.8_25				52693934	NM_175150	2310047H23Rik		ILMN_1223226	007050630	S	2839	CTTCCAGGAGAGCTTACTTTCTAATGCTGGAACTACTTTTCAGTGGCTCC										
Mus musculus	RefSeq	ILMN_213836	ILMN_213836	4921523A10RIK	NM_173449.3	NM_173449.3		110332	146198755	NM_173449.3	4921523A10Rik	NP_775625.1	ILMN_2641284	006060035	S	2164	CCTTAGACCGGGAAGGAAATACAAAAGCTGCAGCTTATATATCATGCGTA				17qC	Mus musculus RIKEN cDNA 4921523A10 gene (4921523A10Rik), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213836	ILMN_213836	4921523A10RIK	NM_173449.3	NM_173449.3		110332	146198755	NM_173449.3	4921523A10Rik	NP_775625.1	ILMN_2755841	001710575	S	1303	GATCATATCTGGAGTACTACACCTGGCAAATGCTGGAAACGTGCAAGCAG				17qC	Mus musculus RIKEN cDNA 4921523A10 gene (4921523A10Rik), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213836	ILMN_213836	4921523A10RIK	NM_173449.3	NM_173449.3		110332	146198755	NM_173449.3	4921523A10Rik	NP_775625.1	ILMN_1244138	005910600	S	1257	CCTATCAGCAGGGTTCCACCAGTCTTCCCTTCCAGAAGACTCCACAGATC				17qC	Mus musculus RIKEN cDNA 4921523A10 gene (4921523A10Rik), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198434	ILMN_252451	LOC213422	XR_002611.1	XR_002611.1		213422	94378995	XR_002611.1	LOC213422		ILMN_1222585	006760356	S	122	ACAGGCAAATTCACCGCAAGACTGTCAGAGTGCAGCCCGAGACCGATGGC				6qF1	PREDICTED: Mus musculus similar to ribosomal protein L28 (LOC213422), mRNA.					
Mus musculus	RefSeq	ILMN_199063	ILMN_199063	LOC380655	XM_358397.1	XM_358397.1			38090683	XM_358397.1	LOC380655		ILMN_2533916	000780102	S	102	TCGAGATCCTCGAATAACTGGACCTGCTGGACGGGTCAAGTGGCGCCCAA										
Mus musculus	RefSeq	ILMN_221057	ILMN_221057	1810030J14RIK	NM_025470.2	NM_025470.2		66289	141802333	NM_025470.2	1810030J14Rik	NP_079746.1	ILMN_1225061	002810279	S	594	CCATGTGGTCCCCCTAGAAAAGGTATCAGACAGCTGTAACAATGGCAACC	1	+	176262800-176262849	1qH3	Mus musculus RIKEN cDNA 1810030J14 gene (1810030J14Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AV054416	AV054416
Mus musculus	RefSeq	ILMN_213667	ILMN_213667	ROCK2	NM_009072.2	NM_009072.2		19878	134949012	NM_009072.2	Rock2	NP_033098.2	ILMN_1248041	002370575	S	4015	ATCACTTCCCAACCAACTGTGAGGCATGTATGAAGCCGCTGTGGCACATG	12	+	16984463-16984512	12qA1.1	Mus musculus Rho-associated coiled-coil containing protein kinase 2 (Rock2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Rho-kinase; mKIAA0619; ROKalpha; B230113H15Rik; Rock-II	Rho-kinase; mKIAA0619; ROKalpha; B230113H15Rik; Rock-II
Mus musculus	RefSeq	ILMN_213667	ILMN_213667	ROCK2	NM_009072.2	NM_009072.2		19878	134949012	NM_009072.2	Rock2	NP_033098.2	ILMN_2639442	001070639	S	1843	AGAAAAGGAACCAGAGCTCTCAGATATCCACTGAGAAGGTCAATCAGCTC	12	+	16965179-16965228	12qA1.1	Mus musculus Rho-associated coiled-coil containing protein kinase 2 (Rock2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Rho-kinase; mKIAA0619; ROKalpha; B230113H15Rik; Rock-II	Rho-kinase; mKIAA0619; ROKalpha; B230113H15Rik; Rock-II
Mus musculus	RefSeq	ILMN_210698	ILMN_210698	NUP188	NM_198304.2	NM_198304.2		227699	38678525	NM_198304.2	Nup188	NP_938046.2	ILMN_2608276	003060433	S	5617	TTTTTTGGTAATACCGTGGTCTATTTATACAAATATTAAAAGTGCTGTTT	2	+	30199729-30199778	2qB	Mus musculus nucleoporin 188 (Nup188), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		U89435; BC025526; KIAA0169; mKIAA0169	U89435; BC025526; KIAA0169; mKIAA0169
Mus musculus	RefSeq	ILMN_192220	ILMN_192220	V1RB3	NM_053226.1	NM_053226.1		113853	16716534	NM_053226.1	V1rb3	NP_444456.1	ILMN_2486080	004920347	S	537	CTTCAGAAAAAGCATGTTTTCCATACCCATGGCCATCAGGGAAGCCTTAC	6	-	90173757-90173806	6qD1	Mus musculus vomeronasal 1 receptor, B3 (V1rb3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]	VN5	VN5
Mus musculus	MEEBO	ILMN_186123	ILMN_186123	GCAP27	scl0014481.1_2						Gcap27		ILMN_1230119	004860041	S	17	GACTTCGGTCATTCCCCCCTGAGATCCATACTGTGACTCCCGTGTAGCCC										
Mus musculus	Riken	ILMN_204366	ILMN_204366	C730023J07RIK	ri|C730023J07|PX00086F10|AK050154|1818					AK050154	C730023J07Rik		ILMN_1256150	005570056	S	1561	CCCCCCAAAAACCATAAGAACCAAACCTTGCACAATCTCCATTCTGTGTA										
Mus musculus	RefSeq	ILMN_199211	ILMN_199211	LOC193300	XM_112564.1	XM_112564.1			20347917	XM_112564.1	LOC193300		ILMN_2534440	002900128	S	217	GGCCCTAGAGAAGATACTTGAGACTCAGCTCCTGCCTTCCAGAAGCCCTC										
Mus musculus	RefSeq	ILMN_210882	ILMN_315447	LOC100040897	XM_001475780.1	XM_001475780.1		100040897	149264862	XM_001475780.1	LOC100040897	XP_001475830.1	ILMN_2610148	004390717	S	757	GCCAGACTGAACTACAAAGTCCATCATACATTCAGTGTGGAGAGTGTGTC	14	+	4042996-4043045	14qA1	PREDICTED: Mus musculus similar to Predicted gene, EG545013, transcript variant 1 (LOC100040897), mRNA.					
Mus musculus	RefSeq	ILMN_231762	ILMN_231762	CANT1	NM_001025617.1	NM_001025617.1		76025	71043971	NM_001025617.1	Cant1	NP_001020788.1	ILMN_3113639	005910113	A	2675	TGTGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGG	11	-	118267751-118267800	11qE2	Mus musculus calcium activated nucleotidase 1 (Cant1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of a ribonucleoside diphosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with diphosphate on its glycose moiety [goid 9191] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments [goid 16462] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]; Catalysis of the reaction: GDP + H2O = GMP + phosphate [goid 4382] [evidence ISO]; Catalysis of the reaction: UDP + H2O = UMP + phosphate [goid 45134] [evidence ISO]	Entpd8; D11Bwg0554e; SCAN-1; Shapy; 5830420C20Rik; Apy1h	Entpd8; D11Bwg0554e; SCAN-1; Shapy; 5830420C20Rik; Apy1h
Mus musculus	RefSeq	ILMN_193543	ILMN_193543	V1RC25	NM_134180.1	NM_134180.1		171198	21717680	NM_134180.1	V1rc25	NP_598941.1	ILMN_1233564	006520563	S	488	GCTCACTCTACCCCATGAACTACATCATCAGGGGATCGATTTTAACAGTG	6	+	58215655-58215704	6qB3	Mus musculus vomeronasal 1 receptor, C25 (V1rc25), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	Riken	ILMN_207206	ILMN_207206	C130005N09RIK	ri|C130005N09|PX00666C09|AK081324|2117					AK081324	C130005N09Rik		ILMN_1256868	007560746	S	1901	AATAGGAGGGTGGCTGGCTCAGGGGGACTCTTCGCATGGTGGTTTGGACT										
Mus musculus	RefSeq	ILMN_187083	ILMN_237518	9130227C08RIK	NM_027143.2	NM_027143.2		219094	142359903	NM_027143.2	9130227C08Rik	NP_081419.1	ILMN_1225859	007040647	S	3597	GAGGCCAGAGTCGGGTAGAGGTATAAAAAGGTAAGGCAGGTGCCACTGGG	14	+	56515339-56515388	14qC3	Mus musculus RIKEN cDNA 9130227C08Rik gene (9130227C08Rik), mRNA.				AI605259; 6330555F21; mKIAA0323	AI605259; 6330555F21; mKIAA0323
Mus musculus	RefSeq	ILMN_221733	ILMN_221733	BIRC4	NM_009688.1	NM_009688.1		11798	6753087	NM_009688.1	Birc4	NP_033818.1	ILMN_2739651	003830750	S	2602	TGTTTTAGATGCTCACTTCTGTGTTTTAGGATTCTGCCCATTTACTTGGA	X	+	39458601-39458650	XqA4	Mus musculus baculoviral IAP repeat-containing 4 (Birc4), mRNA.				Aipa; ILP-1; XIAP; mXIAP; MIHA; Api3; IAP3	Aipa; ILP-1; XIAP; mXIAP; MIHA; Api3; IAP3
Mus musculus	RefSeq	ILMN_221733	ILMN_221733	BIRC4	NM_009688.1	NM_009688.1		11798	6753087	NM_009688.1	Birc4	NP_033818.1	ILMN_2961304	006450136	S	2251	CATCCTGCTGTTTCCAAATGGAGACCAATGCTAACAGCACTGTTTCCGTC	X	+	39458250-39458299	XqA4	Mus musculus baculoviral IAP repeat-containing 4 (Birc4), mRNA.				Aipa; ILP-1; XIAP; mXIAP; MIHA; Api3; IAP3	Aipa; ILP-1; XIAP; mXIAP; MIHA; Api3; IAP3
Mus musculus	RefSeq	ILMN_221733	ILMN_221733	BIRC4	NM_009688.1	NM_009688.1		11798	6753087	NM_009688.1	Birc4	NP_033818.1	ILMN_1221270	003800576	S	1028	CTGTGTGGGAAATAGAAATCCTTTTGCCCCTGACAGGCCACCTGAGACTC	X	+	39447932-39447981	XqA4	Mus musculus baculoviral IAP repeat-containing 4 (Birc4), mRNA.				Aipa; ILP-1; XIAP; mXIAP; MIHA; Api3; IAP3	Aipa; ILP-1; XIAP; mXIAP; MIHA; Api3; IAP3
Mus musculus	RefSeq	ILMN_216207	ILMN_216207	LAX1	NM_172842.2	NM_172842.2		240754	31982125	NM_172842.2	Lax1	NP_766430.2	ILMN_2668455	002810722	S	1729	AGTGGAAGCATGACGTGATAGAAAGTAATCAGGGTCACAAACTCCAGCTG	1	-	135576100-135576149	1qE4	Mus musculus lymphocyte transmembrane adaptor 1 (Lax1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A series of molecular signals initiated by the cross-linking of an antigen receptor on a B or T cell [goid 50851] [evidence IMP]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence IMP]; A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor [goid 46649] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		E430019B13Rik; A530029E09	E430019B13Rik; A530029E09
Mus musculus	MEEBO	ILMN_213657	ILMN_213657	MRPL17	scl027397.1_17	NM_025301.1			13384657	NM_025301.1	Mrpl17		ILMN_2639373	006350332	S	720	AATGAGACCCAGACCTCCCTGCTGACTCACACGATCCTCTTTGCACAGAA						The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]; The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome [goid 2] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]		
Mus musculus	RefSeq	ILMN_190091	ILMN_316834	B430105G09RIK	XM_001474888.1	XM_001474888.1		320907	149234006	XM_001474888.1	B430105G09Rik	XP_001474938.1	ILMN_2467096	000940601	S	1838	GGCTGGTTTTGCCGGTCTTTCATTGTGGCTAAGGGCAGTTCCAGGATACC				1qC1.3	PREDICTED: Mus musculus RIKEN cDNA B430105G09 gene (B430105G09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210217	ILMN_210217	PKNOX1	NM_016670.2	NM_016670.2		18771	34368579	NM_016670.2	Pknox1	NP_057879.2	ILMN_2780760	005260189	S	3681	GCTGTCTAGCAGAAATCTAGACTGGCTGACCCACTCCTCCGGTGGGCTCA	17	+	31744222-31744271	17qB1	Mus musculus Pbx/knotted 1 homeobox (Pknox1), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10551] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]	D17Wsu76e; PREP1	D17Wsu76e; PREP1
Mus musculus	RefSeq	ILMN_210217	ILMN_210217	PKNOX1	NM_016670.2	NM_016670.2		18771	34368579	NM_016670.2	Pknox1	NP_057879.2	ILMN_2780759	003890139	S	3894	AAATGCCCATCCCAGAGGCCCCTCCCGCAGGTTGTGACTGGAACACAGCA	17	+	31744435-31744484	17qB1	Mus musculus Pbx/knotted 1 homeobox (Pknox1), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10551] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]	D17Wsu76e; PREP1	D17Wsu76e; PREP1
Mus musculus	RefSeq	ILMN_189802	ILMN_251805	CACNB4	NM_001037099.1	NM_001037099.1		12298	80861467	NM_001037099.1	Cacnb4	NP_001032176.1	ILMN_1230917	005090044	S	2312	CCCAGCTGTGGAATTTATTTGCTGGAAGCTAAATTTACACTTCAAGTTGG	2	-	52289459-52289508	2qC1.1	Mus musculus calcium channel, voltage-dependent, beta 4 subunit (Cacnb4), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IMP]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process whose specific outcome is the progression of the muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48747] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48541] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; A neurological process that causes the sequential depolarization of a neuron's cell membrane along an axon [goid 19227] [evidence IMP]; The regulated release of gamm-aminobutyric acid by a cell or group of cells. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues [goid 14051] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 46058] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 51932] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	lh; lethargic; Cchb4; 3110038O15Rik; MGC31529	lh; lethargic; Cchb4; 3110038O15Rik; MGC31529
Mus musculus	RefSeq	ILMN_192615	ILMN_251805	CACNB4	NM_001037099.1	NM_001037099.1		12298	80861467	NM_001037099.1	Cacnb4	NP_001032176.1	ILMN_1223194	006900753	S	7710	GCGTAGCGTTCTACAAGGCATGCTGGGGAAAATACACTATGCAAATGTAC	2	-	52284061-52284110	2qC1.1	Mus musculus calcium channel, voltage-dependent, beta 4 subunit (Cacnb4), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IMP]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process whose specific outcome is the progression of the muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48747] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48541] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; A neurological process that causes the sequential depolarization of a neuron's cell membrane along an axon [goid 19227] [evidence IMP]; The regulated release of gamm-aminobutyric acid by a cell or group of cells. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues [goid 14051] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 46058] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 51932] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	lh; lethargic; Cchb4; 3110038O15Rik; MGC31529	lh; lethargic; Cchb4; 3110038O15Rik; MGC31529
Mus musculus	RefSeq	ILMN_198171	ILMN_261735	GPR116	NM_001081178.1	NM_001081178.1		224792	124487170	NM_001081178.1	Gpr116	NP_001074647.1	ILMN_2597987	003360242	S	8275	GGGCTTTTGCACCCCAAAGAGGAATCCAGGGACCCAGGTCAATAGAAGTC	17	+	43596246-43596295	17qB3	Mus musculus G protein-coupled receptor 116 (Gpr116), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	8430401C09Rik; 9330185D23; mKIAA0758; AI528491	8430401C09Rik; 9330185D23; mKIAA0758; AI528491
Mus musculus	RefSeq	ILMN_185090	ILMN_185090	UBE3B	NM_054093.2	NM_054093.2		117146	68533241	NM_054093.2	Ube3b	NP_473434.2	ILMN_2425415	005560014	S	4979	AAGCACCGATATCAACTTGACCCCTTTGTCTTTGACCTAGGGCTGTCTGT	5	+	114870963-114871012	5qF	Mus musculus ubiquitin protein ligase E3B (Ube3b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	AI449831; AU020130	AI449831; AU020130
Mus musculus	RefSeq	ILMN_185090	ILMN_185090	UBE3B	NM_054093.2	NM_054093.2		117146	68533241	NM_054093.2	Ube3b	NP_473434.2	ILMN_2855423	003800402	S	4936	CAGAGCCTGAGAGTTACAGCGGGCACACGGGAGAGTTAGTTGTAAGCACC	5	+	114870920-114870969	5qF	Mus musculus ubiquitin protein ligase E3B (Ube3b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	AI449831; AU020130	AI449831; AU020130
Mus musculus	RefSeq	ILMN_214033	ILMN_214033	FEZ1	NM_183171.1	NM_183171.1		235180	34147206	NM_183171.1	Fez1	NP_898994.1	ILMN_2643495	006560546	S	1390	CGCTGGGATTGCATGACACCACGTAACCTCCGGCGTGTATTTAAACGTGT	9	+	36628316-36628365	9qA4	Mus musculus fasciculation and elongation protein zeta 1 (zygin I) (Fez1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the microtubule constituent protein gamma-tubulin [goid 43015] [evidence IDA]	UNC-76; MGC19293; UNC76	UNC-76; MGC19293; UNC76
Mus musculus	RefSeq	ILMN_214033	ILMN_214033	FEZ1	NM_183171.1	NM_183171.1		235180	34147206	NM_183171.1	Fez1	NP_898994.1	ILMN_1213056	002940576	S	1385	CCATCGCTGGGATTGCATGACACCACGTAACCTCCGGCGTGTATTTAAAC	9	+	36628311-36628360	9qA4	Mus musculus fasciculation and elongation protein zeta 1 (zygin I) (Fez1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the microtubule constituent protein gamma-tubulin [goid 43015] [evidence IDA]	UNC-76; MGC19293; UNC76	UNC-76; MGC19293; UNC76
Mus musculus	Riken	ILMN_206594	ILMN_206594	E030004D24RIK	ri|E030004D24|PX00204M24|AK086841|2720					AK086841	E030004D24Rik		ILMN_1250393	001410181	S	2296	CCCATTCTTCCCTCCCAGGTACTGATGGAAATCTGGGGGAAGGCATTTTG										
Mus musculus	RefSeq	ILMN_216083	ILMN_216083	HBA-A1	NM_008218.2	NM_008218.2		15122	145301577	NM_008218.2	Hba-a1	NP_032244.2	ILMN_1212702	002000398	S	175	TTGATGTAAGCCACGGCTCTGCCCAGGTCAAGGGTCACGGCAAGAAGGTC				11qA4	Mus musculus hemoglobin alpha, adult chain 1 (Hba-a1), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IEA]	The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IGI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	Hba1	Hba1
Mus musculus	RefSeq	ILMN_218743	ILMN_218743	CD209F	XM_284386.5	XM_284386.5		69142	94383006	XM_284386.5	Cd209f	XP_284386.3	ILMN_2699665	006290093	S	1004	GTAGGTGATTTCAGTTCCACAAATCCTGAGCTCAGGAGTCCCCTCAGTAG	8	-	4102905-4102954	8qA1.1	PREDICTED: Mus musculus CD209f antigen, transcript variant 1 (Cd209f), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212581	ILMN_212581	INSR	NM_010568.1	NM_010568.1		16337	6754359	NM_010568.1	Insr	NP_034698.1	ILMN_2628026	000990161	S	4073	ACGGACCTATGATGAACACATCCCCTATACCCACATGAATGGGGGCAAGA	8	-	3155713-3155762	8qA1.1	Mus musculus insulin receptor (Insr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CD220; 4932439J01Rik; IR	CD220; 4932439J01Rik; IR
Mus musculus	Riken	ILMN_202389	ILMN_202389	4930563O14RIK	ri|4930563O14|PX00035B11|AK016212|643					AK016212	4930563O14Rik		ILMN_2549234	006960274	S	22	AGTAGATCGACCTGGGTTAGGCTGTGGGATCCATCATGCTAGCTCCTGAG										
Mus musculus	MEEBO	ILMN_195395	ILMN_195395	4432406C05RIK	scl48783.2_107				13385165	NM_025708	4432406C05Rik		ILMN_2515217	004780110	S	20	AGAGCCTGTAGGTCCTAGTATCCTCCGAAGCCATGCTTCAGTGACCTAAC										
Mus musculus	RefSeq	ILMN_212092	ILMN_212092	SEZ6L2	NM_144926.4	NM_144926.4		233878	148539965	NM_144926.4	Sez6l2	NP_659175.1	ILMN_1240947	005960114	S	595	ACTGAGCCAGGGACAGGGCCTCTGACGACAGCTGTCACCCCCAAGGGAGT				7qF3	Mus musculus seizure related 6 homolog like 2 (Sez6l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Psk1; MGC90604; MGC19060; AI835913; BSRP-A; AW121566	Psk1; MGC90604; MGC19060; AI835913; BSRP-A; AW121566
Mus musculus	Riken	ILMN_204263	ILMN_204263	B130005I07RIK	ri|B130005I07|PX00156P06|AK044820|2296					AK044820	B130005I07Rik		ILMN_1240644	004150446	S	2036	CACAGTGGGTTCTGAGGAAACCGTCATCCAGCCACCTTCCACCTTCACTC										
Mus musculus	Riken	ILMN_204810	ILMN_204810	C530040B18RIK	ri|C530040B18|PX00082L24|AK049694|1127					AK049694	C530040B18Rik		ILMN_2567788	003310554	S	963	ATGTTCTAATCAGAATGTTGTCAGGTCTTCTTGATTTTGGTTTCTTTGAT										
Mus musculus	Riken	ILMN_206940	ILMN_206940	D630008P07RIK	ri|D630008P07|PX00196H03|AK085306|1173					AK085306	D630008P07Rik		ILMN_1259101	006840296	S	687	CACTTCCCCTACCTGCACTGTGTGTGGAGTGCTGACAGAGGCTAACAGAA										
Mus musculus	RefSeq	ILMN_217056	ILMN_217056	2200001I15RIK	NM_183278.2	NM_183278.2		69134	142367260	NM_183278.2	2200001I15Rik	NP_899101.1	ILMN_2678637	000460682	S	193	AAGCCCAAGAATCAGGAGACAGGGTGGTGAAGGAGGTCACTGAGAAGGTC	14	-	35165192-35165241	14qB	Mus musculus RIKEN cDNA 2200001I15 gene (2200001I15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_190961	ILMN_190961	TMIE	NM_146260.2	NM_146260.2		20776	118130173	NM_146260.2	Tmie	NP_666372.1	ILMN_1218037	005390632	S	2343	TTCTATGGCCAGGACTCTCTGATGATGGCAGCAGTCAGCCATCTGCCTGC	9	-	110768594-110768643	9qF3	Mus musculus transmembrane inner ear (Tmie), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]		sr; Mm.87012; 5131400L21Rik	sr; Mm.87012; 5131400L21Rik
Mus musculus	Riken	ILMN_206889	ILMN_206889	E030025L23RIK	ri|E030025L23|PX00206A07|AK087080|1623					AK087080	E030025L23Rik		ILMN_1226375	004860739	S	1384	GTGTCTGTCCCCAGTCAGAGTTACCTAGAAGACAGGTGCTACCAACCCTC										
Mus musculus	Riken	ILMN_203079	ILMN_203079	ARHGEF1	ri|A430058L24|PX00136H20|AK040093|348					AK040093	Arhgef1		ILMN_1236256	006960608	S	267	CATCCCAGGAGTTGGGAAGCAGAGACAGGAGGATTGCCATGAGTTCGAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_216352	ILMN_216352	F630111L10RIK	scl0320463.1_145	NM_177165.2			31342958	NM_177165.2	F630111L10Rik		ILMN_2670074	005810563	S	2105	CCCCTCTCCACGTACTGCATTAGCTCTGGGGTAATTAAGCTCTGCACTAG										
Mus musculus	RefSeq	ILMN_218532	ILMN_323046	ECE2	NM_177940.1	NM_177940.1		107522	153945793	NM_177940.1	Ece2	NP_808809.1	ILMN_1216591	001980180	S	3223	GTCCCTGGGCCAAATAGAAAAGCAGATCGAGTAGAGAAAAGGAAAGAGTT				16qB1	Mus musculus endothelin converting enzyme 2 (Ece2), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	6330509A19Rik; 1810009K13Rik; MGC144386; MGC144385; 9630025D12Rik; BB127715	6330509A19Rik; 1810009K13Rik; MGC144386; MGC144385; 9630025D12Rik; BB127715
Mus musculus	RefSeq	ILMN_218586	ILMN_218586	TBK1	NM_019786.3	NM_019786.3		56480	142366446	NM_019786.3	Tbk1	NP_062760.2	ILMN_1241535	007330341	S	2719	CGGTTCCCTGACAAGGATAAAGTGGCATTATCTCATTTGACCGGGTGCCC	10	-	120983726-120983775	10qD2	Mus musculus TANK-binding kinase 1 (Tbk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC150301; 1200008B05Rik; AW048562; AI462036; MGC150302	MGC150301; 1200008B05Rik; AW048562; AI462036; MGC150302
Mus musculus	RefSeq	ILMN_257054	ILMN_257054	TMEM92	NM_001034896.2	NM_001034896.2		544806	119360342	NM_001034896.2	Tmem92	NP_001030068.1	ILMN_2866742	004010010	S	1843	TTGGGCTCTGAGAACTGGGCTTTTCCCTGTTGGAGGAGGTCACGTCAGCC	11	-	94638681-94638730	11qD	Mus musculus transmembrane protein 92 (Tmem92), mRNA.				AU016430	AU016430
Mus musculus	RefSeq	ILMN_199199	ILMN_257054	TMEM92	NM_001034896.2	NM_001034896.2		544806	119360342	NM_001034896.2	Tmem92	NP_001030068.1	ILMN_1259105	006590528	S	583	GATGAGAGGGCGTGCCTATGCAACCCTTTGAGCTTCCTTACACACATCTC	11	-	94639941-94639960:94639961-94639990	11qD	Mus musculus transmembrane protein 92 (Tmem92), mRNA.				AU016430	AU016430
Mus musculus	RefSeq	ILMN_213728	ILMN_213728	MARCH1	NM_175188.3	NM_175188.3		72925	42734482	NM_175188.3	March1	NP_780397.2	ILMN_2918977	002680669	S	2964	CCTGAAGAGGCAGAGATGGCCCTAAGAACCAAAGCACGGGCATCACGTTG	8	+	68994109-68994158	8qB3.1-qB3.2	Mus musculus membrane-associated ring finger (C3HC4) 1 (March1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BB085186; 2900024D24Rik	BB085186; 2900024D24Rik
Mus musculus	RefSeq	ILMN_213728	ILMN_213728	MARCH1	NM_175188.3	NM_175188.3		72925	42734482	NM_175188.3	March1	NP_780397.2	ILMN_2918981	004390274	S	2825	ACTGCAATGAGCTGGGTAAATACTCACAAACAGTAGTTAGCTGTCGAAAG	8	+	68993970-68994019	8qB3.1-qB3.2	Mus musculus membrane-associated ring finger (C3HC4) 1 (March1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BB085186; 2900024D24Rik	BB085186; 2900024D24Rik
Mus musculus	RefSeq	ILMN_214332	ILMN_214332	MTX1	NM_013604.1	NM_013604.1		17827	7305290	NM_013604.1	Mtx1	NP_038632.1	ILMN_2646938	004260754	S	271	GCTCGCCAAGGAGCAGATACCCTAGCCTTCATGTCTCTGCTGGAGGAGAA	3	-	89014521-89014570	3qF1	Mus musculus metaxin 1 (Mtx1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		Mtx; Gcap6	Mtx; Gcap6
Mus musculus	RefSeq	ILMN_214332	ILMN_214332	MTX1	NM_013604.1	NM_013604.1		17827	7305290	NM_013604.1	Mtx1	NP_038632.1	ILMN_2724919	004890338	S	969	GCGTTCCTGTTCCCAGGACTGACTTTTCTACTCGTGCATTCCAGCTGTCC	3	-	89013076-89013125	3qF1	Mus musculus metaxin 1 (Mtx1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		Mtx; Gcap6	Mtx; Gcap6
Mus musculus	RefSeq	ILMN_214332	ILMN_214332	MTX1	NM_013604.1	NM_013604.1		17827	7305290	NM_013604.1	Mtx1	NP_038632.1	ILMN_2972149	002940594	S	760	CCACTTCCACGCCAGACACCAGCAGCCCCTGAGACCGAGGAGGAGCCATA	3	-	89013285-89013334	3qF1	Mus musculus metaxin 1 (Mtx1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		Mtx; Gcap6	Mtx; Gcap6
Mus musculus	RefSeq	ILMN_213116	ILMN_213116	D1ERTD622E	NM_133825.2	NM_133825.2		52392	31981586	NM_133825.2	D1Ertd622e	NP_598586.1	ILMN_2633819	004810301	S	2636	GTTATTTATTGATGATTTTCCCTCTGGAACTGTATTATTTCTAACTGAAA	1	-	99540489-99540538	1qD	Mus musculus DNA segment, Chr 1, ERATO Doi 622, expressed (D1Ertd622e), mRNA.				AW047450; AI987691	AW047450; AI987691
Mus musculus	RefSeq	ILMN_199308	ILMN_199308	LOC212963	XM_159721.1	XM_159721.1			20964085	XM_159721.1	LOC212963		ILMN_2534790	004070288	S	168	TCCTCCTTACAGCAGCATCACTGTGGAAGCTCCTACCACTTCAGATACTG										
Mus musculus	RefSeq	ILMN_190726	ILMN_256859	EG245190	XM_486328.4	XM_486328.4		245190	94380878	XM_486328.4	EG245190	XP_486328.1	ILMN_2472741	002760053	S	4991	CTCAACTGAGAAATCTGGACCTCCCTTGGGCTGTTTTCTATAAAGTCTGC	7	-	106772603-106772652	7qE2	PREDICTED: Mus musculus predicted gene, EG245190 (EG245190), mRNA.					
Mus musculus	RefSeq	ILMN_210331	ILMN_210331	CLEC1A	NM_175526.1	NM_175526.1		243653	28202062	NM_175526.1	Clec1a	NP_780735.1	ILMN_2801601	007550022	S	2933	GCAGAACACAAGGGCAGCATCTGTAGTCATTAAAGAAGAAAGGTATTCTC	6	-	129392483-129392532	6qF3	Mus musculus C-type lectin domain family 1, member a (Clec1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5930406N14Rik	5930406N14Rik
Mus musculus	RefSeq	ILMN_191885	ILMN_230422	PPP6C	NM_024209.2	NM_024209.2		67857	142359530	NM_024209.2	Ppp6c	NP_077171.1	ILMN_1242053	005560593	S	1351	GGAAGTCCTCCTCATTTGTATCAGCCAGCCTTCTGTTTTTGTTTGGTAGG	2	-	39052475-39052524	2qB	Mus musculus protein phosphatase 6, catalytic subunit (Ppp6c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISO]	2310003C10Rik	2310003C10Rik
Mus musculus	RefSeq	ILMN_216061	ILMN_216061	ATP2A1	NM_007504.2	NM_007504.2		11937	36031131	NM_007504.2	Atp2a1	NP_031530.2	ILMN_2666864	000780356	S	3361	CCCGAACTCACGGGGCTTGCAGGCACAAGGCAACTGACTAGCTGATTGCT	7	-	133589403-133589452	7qF3	Mus musculus ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 (Atp2a1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISO]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence ISO]	SERCA1	SERCA1
Mus musculus	RefSeq	ILMN_228147	ILMN_228147	AI447904	NM_175026.1	NM_175026.1		236312	27923920	NM_175026.1	AI447904	NP_778191.1	ILMN_3083424	005860671	A	1475	AGACTCATATGCTTTAAACTGATCCCAGATGAAGAAAAAGCACAGCTGAG	1	+	175481436-175481485	1qH3	Mus musculus expressed sequence AI447904 (AI447904), mRNA.				4930422C14; MGC130359; MGC130358	4930422C14; MGC130359; MGC130358
Mus musculus	Riken	ILMN_202944	ILMN_202944	A930017G19RIK	ri|A930017G19|PX00066A18|AK044503|1771					AK044503	A930017G19Rik		ILMN_1230665	006860575	S	1449	CTTGGCTTTGTGAGCTGTGGCAGGGAGGGACCTAGCATGGGAGCAAAGGT										
Mus musculus	MEEBO	ILMN_213509	ILMN_213509	4930510E17RIK	scl36952.2.1_326				51764865	XM_486221	4930510E17Rik		ILMN_2637771	000070521	S	1566	CCACAGTAATGGCATCAGCATCACAACATCTTAAATTGTGCTCTTTACAC										
Mus musculus	MEEBO	ILMN_211487	ILMN_211487	OSR1	scl35223.18_513	XM_135264.4			38090153	XM_135264.4	Osr1		ILMN_1256444	002030670	S	4461	CGAGAGCAAGGATATACCAGCGAGGTCAGCCCCTCTAGAATGTTTGCTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones [goid 8406] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process whose specific outcome is the progression of the intermediate mesoderm over time, from its formation to the mature structure. The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads [goid 48389] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185806	ILMN_242678	PSMB3	NM_011971.4	NM_011971.4		26446	146134486	NM_011971.4	Psmb3	NP_036101.1	ILMN_2708599	004780736	S	476	CCTGCTCCGAACAAATGTATGGGATGTGTGAGTCTCTCTGGGAGCCCAAC				11qD	Mus musculus proteasome (prosome, macropain) subunit, beta type 3 (Psmb3), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence ISO]	C10-II; MGC106850; AL033320	C10-II; MGC106850; AL033320
Mus musculus	Riken	ILMN_202102	ILMN_202102	DCLRE1A	ri|2810043H12|ZX00065F13|AK012900|1395					AK012900	Dclre1a		ILMN_2547010	006620450	S	1240	GTTTCCACAAATGTCGCTGAACCTTTCTTTCACTCTGCTTTCTCCTACTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]			
Mus musculus	Riken	ILMN_206058	ILMN_206058	D330001K12RIK	ri|D330001K12|PX00190E22|AK052157|2655					AK052157	D330001K12Rik		ILMN_1213660	002260360	S	2105	TCTCTGGACTGAAAATGAGAAGTGGGGACAGGGCAAGTCTAGAGTGACAC										
Mus musculus	Riken	ILMN_203730	ILMN_203730	9830116C06RIK	ri|9830116C06|PX00118C24|AK036483|3272					AK036483	9830116C06Rik		ILMN_1216687	007560670	S	2796	GGAGACCTCCAAACAACACAGGCTGATGGTAGGACAGAGAGTCACTTGCT										
Mus musculus	RefSeq	ILMN_220642	ILMN_220642	OOG2	NM_198661.2	NM_198661.2		381570	141802198	NM_198661.2	Oog2	NP_941063.1	ILMN_1224497	004810435	S	1691	CTGAGACACATTGAAAAGAAATAATTGTCCTCAGAGCTGGTGAAGAGTAT	4	+	143784969-143785018	4qE1	Mus musculus oogenesin 2 (Oog2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC60747; C85069	MGC60747; C85069
Mus musculus	RefSeq	ILMN_214124	ILMN_314055	SRPX2	NM_001083895.1	NM_001083895.1		68792	140971049	NM_001083895.1	Srpx2	NP_001077364.1	ILMN_2644515	003520082	S	1204	GTGATTCGTTATACTGCCTATGACCGAGCCTACAACCGGGCCAGCTGCAA	X	+	130461664-130461713	XqE3	Mus musculus sushi-repeat-containing protein, X-linked 2 (Srpx2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			SRP; SRPUL; 1110039C07Rik	SRP; SRPUL; 1110039C07Rik
Mus musculus	RefSeq	ILMN_214124	ILMN_314055	SRPX2	NM_001083895.1	NM_001083895.1		68792	140971049	NM_001083895.1	Srpx2	NP_001077364.1	ILMN_2698728	004120719	S	2109	CCTATGAAACTGAGGACATGCCCTGGGTGGTGAGTTGTAGACCGAAGGCC	X	+	130466224-130466273	XqE3	Mus musculus sushi-repeat-containing protein, X-linked 2 (Srpx2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			SRP; SRPUL; 1110039C07Rik	SRP; SRPUL; 1110039C07Rik
Mus musculus	RefSeq	ILMN_199701	ILMN_199701	LOC383840	XM_357287.1	XM_357287.1			38076248	XM_357287.1	LOC383840		ILMN_1252160	000160725	S	334	GATCTTTTATGGGCTTCGGCATCATCAGAGAGAGCAGGTGGAAGCGCGGG										
Mus musculus	RefSeq	ILMN_188138	ILMN_188138	ZFP30	NM_013705.1	NM_013705.1		22693	7305644	NM_013705.1	Zfp30	NP_038733.1	ILMN_2450096	000670594	S	2521	CCGTGTCTTCCACTGCGACATTGTGATATTCCCACCTAACTCAACGCACC	7	+	30579476-30579525	7qB1	Mus musculus zinc finger protein 30 (Zfp30), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2610306P15Rik; Zfp-30	2610306P15Rik; Zfp-30
Mus musculus	RefSeq	ILMN_186098	ILMN_255960	GLB1	NM_009752.1	NM_009752.1		12091	6753189	NM_009752.1	Glb1	NP_033882.1	ILMN_1221935	003140047	S	2235	GGCTGAAGGGAGTGGACACCACAGGAAGACACAGGTTGGAGCAAAACTTG	9	+	114383377-114383426	9qF3	Mus musculus galactosidase, beta 1 (Glb1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A multimeric enzyme complex that in E. coli is a heterooctamer made up of four alpha subunits and four beta subunits. Catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides [goid 9341] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	Bge; Bgl-e; C130097A14Rik; Bgl-s; Bgs; AW125515; Bgl-t; Bgl; Bgt	Bge; Bgl-e; C130097A14Rik; Bgl-s; Bgs; AW125515; Bgl-t; Bgl; Bgt
Mus musculus	Riken	ILMN_204910	ILMN_204910	C130066G14RIK	ri|C130066G14|PX00170P13|AK048497|4289					AK048497	C130066G14Rik		ILMN_2568554	004200072	S	4040	GTCATCAAGGCAGGAGCGTGGTAGCATCTAAGCAGGCATGGTGCAGGAAG										
Mus musculus	RefSeq	ILMN_256045	ILMN_256045	XPNPEP2	NM_133213.1	NM_133213.1		170745	18875363	NM_133213.1	Xpnpep2	NP_573476.1	ILMN_3158369	005670400	A	3162	GGGGCCAGATGGGTTGGCATTCTAGTTCCTTTGCCCATCAGCACCATGCC	X	+	44381422-44381471	XqA4	Mus musculus X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound (Xpnpep2), transcript variant 1, mRNA.			Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	mAPP; 9030008G12Rik	mAPP; 9030008G12Rik
Mus musculus	RefSeq	ILMN_192436	ILMN_248261	DGKE	NM_019505.3	NM_019505.3		56077	126432551	NM_019505.3	Dgke	NP_062378.1	ILMN_2658108	001690671	S	1792	GTTGGCGTCTATGGGTCTTTCCACTGTGCTCAAATCCAGGTGAAACTGGC	11	-	88902798-88902847	11qC	Mus musculus diacylglycerol kinase, epsilon (Dgke), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DAGK6; DGK; C87606	DAGK6; DGK; C87606
Mus musculus	RefSeq	ILMN_209097	ILMN_209097	DIS3L2	NM_153530.1	NM_153530.1		208718	24233555	NM_153530.1	Dis3l2	NP_705758.1	ILMN_2592496	001570075	S	2758	CTGTGCCTGCCCTACCCTGCTGGCTTTTAGGAATAGGACCTTTTGACACC	1	+	88856411-88856430:88869975-88870004	1qD	Mus musculus DIS3 mitotic control homolog (S. cerevisiae)-like 2 (Dis3l2), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]	MGC37640; 8030493P09Rik; 4930429A22Rik	MGC37640; 8030493P09Rik; 4930429A22Rik
Mus musculus	RefSeq	ILMN_196606	ILMN_196606	EPM2A	NM_010146.2	NM_010146.2		13853	116063574	NM_010146.2	Epm2a	NP_034276.2	ILMN_2920454	002070541	S	846	GCTGCAGTGTGCGGCTGGCTCCACTATGTGATTGGCTGGAATCTGCGCAA	10	+	11177042-11177091	10qA1	Mus musculus epilepsy, progressive myoclonic epilepsy, type 2 gene alpha (Epm2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence TAS]		
Mus musculus	RefSeq	ILMN_211383	ILMN_211383	LIMD1	NM_013860.1	NM_013860.1		29806	7305236	NM_013860.1	Limd1	NP_038888.1	ILMN_2615259	004810520	S	4522	GACCAGCGCTGTTTTCTCTCTTTGGTTTCCCGGGCTGGCTTTGGCAAGGG	9	+	123430344-123430393	9qF4	Mus musculus LIM domains containing 1 (Limd1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D9Ertd192e; AW822033	D9Ertd192e; AW822033
Mus musculus	RefSeq	ILMN_197572	ILMN_197572	LOC380930	XM_358467.1	XM_358467.1			38076633	XM_358467.1	LOC380930		ILMN_1256060	004570176	S	585	GGCTTGAGTTTTCCCAAAGCCAGTTCCACAGCTGCCCTTCACGATTATGG										
Mus musculus	RefSeq	ILMN_200860	ILMN_315334	WDR88	XR_035588.1	XR_035588.1		384605	149257054	XR_035588.1	Wdr88		ILMN_2540257	005960040	S	1132	AGGTCCATCACTTCATGCTGCTTTGACCCTGACAGCCAGAAGGTGGCTTC				7qB1	PREDICTED: Mus musculus WD repeat domain 88 (Wdr88), misc RNA.					
Mus musculus	RefSeq	ILMN_213395	ILMN_213395	OLFR1138	NM_146639.1	NM_146639.1		258632	33239169	NM_146639.1	Olfr1138	NP_666850.1	ILMN_1224920	000110041	S	794	CCTACTCCCTAGATCAAGATAAAGTGACGTCCCTTTTTTATACACTTGTG	2	-	87577636-87577685	2qD	Mus musculus olfactory receptor 1138 (Olfr1138), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR177-8	MOR177-8
Mus musculus	Riken	ILMN_205639	ILMN_205639	9330158F14RIK	ri|9330158F14|PX00105J22|AK034126|2340					AK034126	9330158F14Rik		ILMN_2574113	007560451	S	1833	CAGGAACATAAGAAGTGAAAAGATGCAGCCAGATGTAAGGAGGCAGCCAG										
Mus musculus	RefSeq	ILMN_260500	ILMN_260500	PARD6A	NM_001047436.1	NM_001047436.1		56513	114145500	NM_001047436.1	Pard6a	NP_001040901.1	ILMN_3114759	001850110	A	1092	TCTGGCTGGGGGAATGGCATGCGAGGTGATGTTAGCGGATTCAGCCTCTG	8	+	108227212-108227261	8qD3	Mus musculus par-6 (partitioning defective 6,) homolog alpha (C. elegans) (Pard6a), transcript variant 3, mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The specification and formation of anisotropic intracellular organization or cell growth patterns [goid 30010] [evidence TAS]; The maintenance of junctions between cells [goid 45217] [evidence IDA]	Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TAX40; Par6; 0710008C04Rik; Tip-40; PAR6alpha; Par6c; Par-6	TAX40; Par6; 0710008C04Rik; Tip-40; PAR6alpha; Par6c; Par-6
Mus musculus	RefSeq	ILMN_219612	ILMN_251765	4930583I09RIK	XM_915248.2	XM_915248.2		78057	94403060	XM_915248.2	4930583I09Rik	XP_920341.1	ILMN_2711199	003520259	S	319	GCTTTGGCTCAGATTTACTGCCTGCCATTTGCTGCTTGATACCCTCCTTC				17qE1.1	PREDICTED: Mus musculus RIKEN cDNA 4930583I09 gene (4930583I09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223429	ILMN_223429	FCHO2	NM_172591.2	NM_172591.2		218503	34328382	NM_172591.2	Fcho2	NP_766179.1	ILMN_2764019	000270286	S	4547	GCCCAGTAGATTCAGTGGGAGACTATCTTATCTAGCAAGCTGGTTCTTGC	13	-	99493580-99493629	13qD1	Mus musculus FCH domain only 2 (Fcho2), mRNA.				5832424M12Rik; AA387320	5832424M12Rik; AA387320
Mus musculus	RefSeq	ILMN_229391	ILMN_229391	IGSF9B	NM_001033323.1	NM_001033323.1		235086	85701825	NM_001033323.1	Igsf9b	NP_001028495.1	ILMN_2858183	001450619	S	2585	CGACGTGGGAAATCTGTTGGATCTTGTGAGAGTGTGCTGGGTGCGGTACA	9	+	27079309-27079358	9qA4	Mus musculus immunoglobulin superfamily, member 9B (Igsf9b), mRNA.				KIAA1030; mKIAA1030; Gm508	KIAA1030; mKIAA1030; Gm508
Mus musculus	MEEBO	ILMN_186023	ILMN_186023	E430028B21RIK	scl46539.1.160_71				40538841	NM_178668	E430028B21Rik		ILMN_2510178	007040121	S	3	GCCAGTTCTGATATCTGTCCGATTTGACTGGTGTTTTTCAAGCTTATCTG										
Mus musculus	MEEBO	ILMN_186023	ILMN_186023	E430028B21RIK	scl46539.1.160_71				40538841	NM_178668	E430028B21Rik		ILMN_1255134	007650598	S	20	AATAGTATGATTTTGATAATACATATTGGAGGGAAAGGACTAGGAACACT										
Mus musculus	RefSeq	ILMN_185104	ILMN_185104	ZC3H3	NM_172121.1	NM_172121.1		223642	26006470	NM_172121.1	Zc3h3	NP_742119.1	ILMN_2507227	000110270	S	3153	TCTAGGACTTGTCCCTGGCTCCCCATCCATCAGGGTGCCATGTGAGGTTC	15	-	75585012-75585061	15qD3	Mus musculus zinc finger CCCH type containing 3 (Zc3h3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zc3hdc3; Kiaa0150; BC049953; Smicl	Zc3hdc3; Kiaa0150; BC049953; Smicl
Mus musculus	RefSeq	ILMN_185104	ILMN_185104	ZC3H3	NM_172121.1	NM_172121.1		223642	26006470	NM_172121.1	Zc3h3	NP_742119.1	ILMN_1223793	002030646	S	1698	GGCGCATCCCATTATCCAGGTCCCTAGTGCTAAACCGCCTTCGTCCAGCA	15	-	75616036-75616067:75639958-75639975	15qD3	Mus musculus zinc finger CCCH type containing 3 (Zc3h3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zc3hdc3; Kiaa0150; BC049953; Smicl	Zc3hdc3; Kiaa0150; BC049953; Smicl
Mus musculus	RefSeq	ILMN_185104	ILMN_185104	ZC3H3	NM_172121.1	NM_172121.1		223642	26006470	NM_172121.1	Zc3h3	NP_742119.1	ILMN_2850170	000620021	S	3272	ACTCCTGCCCAGGGAAGAGGCTAATGGCCAGGCCTCTCTGGTGGGTATTT	15	-	75584893-75584942	15qD3	Mus musculus zinc finger CCCH type containing 3 (Zc3h3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zc3hdc3; Kiaa0150; BC049953; Smicl	Zc3hdc3; Kiaa0150; BC049953; Smicl
Mus musculus	RefSeq	ILMN_220495	ILMN_220495	TAS2R113	NM_207018.1	NM_207018.1		387345	46309588	NM_207018.1	Tas2r113	NP_996901.1	ILMN_2722806	006960181	S	539	CCTTTACTAACCCTATGTTCACATTCATACCTTTTGTTATGTCCACGGTA	6	+	132843567-132843616	6qG1	Mus musculus taste receptor, type 2, member 113 (Tas2r113), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	T2R13; mGR13; Tas2r13; mt2r58	T2R13; mGR13; Tas2r13; mt2r58
Mus musculus	Riken	ILMN_205137	ILMN_205137	NDST1	ri|9530080J05|PX00114M19|AK035642|2775					AK035642	Ndst1		ILMN_1250134	007650280	S	2433	AATGGAAGCAGGAGGACCAGCCAGGAGTCAGCATCAGGTCTCCACACGAG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The chemical reactions and pathways resulting in the formation of polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages [goid 271] [evidence IMP]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IMP]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence TAS]; The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence TAS]; The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process by which the anatomical structures of neurocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The neurocranium is the portion of the vertebrate skull surrounding the brain [goid 48702] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-desulfoheparin = adenosine 3',5'-bisphosphate + heparin [goid 15016] [evidence TAS]		
Mus musculus	RefSeq	ILMN_213890	ILMN_213890	KIF13A	NM_010617.2	NM_010617.2		16553	120300943	NM_010617.2	Kif13a	NP_034747.2	ILMN_2641876	003370092	S	6216	CCAAGCAGGTGGAGTGCACAGGGAAGTGTTACTGCACACAACGCAGCGAT	13	-	46845056-46845105	13qA5	Mus musculus kinesin family member 13A (Kif13a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	mKIAA4109; 4930505I07Rik; KIAA4109	mKIAA4109; 4930505I07Rik; KIAA4109
Mus musculus	RefSeq	ILMN_211962	ILMN_211962	OLFR706	NM_146353.1	NM_146353.1		258350	22129596	NM_146353.1	Olfr706	NP_666465.1	ILMN_2621223	002850180	S	563	CCTGTGTAGATACCTCCCAATATGAGCTCATGGTTTATGTGACAGGGGTG	7	-	114029717-114029766	7qE3	Mus musculus olfactory receptor 706 (Olfr706), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR283-11	MOR283-11
Mus musculus	MEEBO	ILMN_208945	ILMN_208945	2810428J06RIK	scl21481.1.939_212	NM_025941.1			21313149	NM_025941.1	2810428J06Rik		ILMN_1256360	004880707	S	1576	CCCTATATGGTGACACTGGTGTCTGAGTACACTGAATTGTAATCTGGCAC										
Mus musculus	RefSeq	ILMN_223153	ILMN_259334	NUP210L	XM_982763.2	XM_982763.2		77595	149251579	XM_982763.2	Nup210l	XP_987857.2	ILMN_1231456	004920546	S	2259	CCCTCTGTGGAAAAGGTGCAGGTGCGTTTCATCTGTGCCCATCCTGCCAG				3qF1	PREDICTED: Mus musculus nucleoporin 210-like (Nup210l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_204551	ILMN_204551	B930008A12RIK	ri|B930008A12|PX00162F07|AK046962|1820					AK046962	B930008A12Rik		ILMN_1258704	006620154	S	1531	CTGCGGCTAAGTTCAAACCCACTTCCTGGATTTCTCCAAAGCCTGGAGGG										
Mus musculus	RefSeq	ILMN_214519	ILMN_214519	OLFR1098	NM_146845.2	NM_146845.2		258842	116174765	NM_146845.2	Olfr1098	NP_667056.2	ILMN_1240612	004260520	S	630	GCTAATCACGATATCCGCATCCTATGTATCTATTCTCTCTACAATTTTGA	2	-	86763008-86763057	2qD	Mus musculus olfactory receptor 1098 (Olfr1098), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR206-1	MOR206-1
Mus musculus	Riken	ILMN_206166	ILMN_206166	D130017D19RIK	ri|D130017D19|PX00182L09|AK083827|3639					AK083827	D130017D19Rik		ILMN_1226990	004040209	S	3434	GTTGGGTCCAGTCAGGTTCATCACAACTCACACTCCACGACAATGCAAAG										
Mus musculus	Riken	ILMN_207199	ILMN_207199	C030019P07RIK	ri|C030019P07|PX00665D20|AK081243|4431					AK081243	C030019P07Rik		ILMN_1215492	006350239	S	2629	CGGGTCTCAGGAAAGCCACCCACACGGCTACGGCAAAGTTGGCTGCATGA										
Mus musculus	Riken	ILMN_202513	ILMN_202513	1700120C01RIK	ri|1700120C01|ZX00078M03|AK007209|633					AK007209	1700120C01Rik		ILMN_1257166	001740019	S	484	TTTGGGCCACACCTCTGCAGGCATCCACAAAGGTAGCTAACCCAGACCCC										
Mus musculus	RefSeq	ILMN_214642	ILMN_214642	MAN2A2	NM_172903.1	NM_172903.1		140481	27777690	NM_172903.1	Man2a2	NP_766491.1	ILMN_2977791	004730132	S	3540	TGCAGGTCTGGTTCTCCGGCCTTACTGGGCTTCTCAAGGTAAAGGGCCAG	7	-	80234395-80234444	7qD3	Mus musculus mannosidase 2, alpha 2 (Man2a2), mRNA.			Catalysis of the hydrolysis of any N-glycosyl bond [goid 16799] [evidence IDA]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [evidence IDA]	1700052O22Rik; 4931438M07Rik; MX; AI480988	1700052O22Rik; 4931438M07Rik; MX; AI480988
Mus musculus	RefSeq	ILMN_211823	ILMN_211823	SLC25A1	NM_153150.1	NM_153150.1		13358	23943837	NM_153150.1	Slc25a1	NP_694790.1	ILMN_2619846	005700427	S	1067	CTCCATTCCAGACCCCCCGCCACCTACTCTGATGATTCCAGTGCAGTAGT	16	-	17926767-17926816	16qA3	Mus musculus solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 (Slc25a1), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC47055; Dgsj; 1300019P08Rik; AI194714; Slc20a3; Ctp; 2610100G11Rik	MGC47055; Dgsj; 1300019P08Rik; AI194714; Slc20a3; Ctp; 2610100G11Rik
Mus musculus	RefSeq	ILMN_211823	ILMN_211823	SLC25A1	NM_153150.1	NM_153150.1		13358	23943837	NM_153150.1	Slc25a1	NP_694790.1	ILMN_2919263	006060577	S	1495	GGCTATAGGCCCCCCTGCTTTTCCCGCCATTGGCCTTAAATGGCCCTCGG	16	-	17926283-17926332	16qA3	Mus musculus solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1 (Slc25a1), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC47055; Dgsj; 1300019P08Rik; AI194714; Slc20a3; Ctp; 2610100G11Rik	MGC47055; Dgsj; 1300019P08Rik; AI194714; Slc20a3; Ctp; 2610100G11Rik
Mus musculus	RefSeq	ILMN_238506	ILMN_238506	TRIM63	NM_001039048.2	NM_001039048.2		433766	124244069	NM_001039048.2	Trim63	NP_001034137.2	ILMN_3161060	007550246	S	999	TACAGAAGAGGAGGCTGATGAGGAAGAGGGCGTGACCACAGAGGGACACC	4	+	133881539-133881588	4qD3	Mus musculus tripartite motif-containing 63 (Trim63), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence ISA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence ISA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	Rnf28; RF1; MuRF1	Rnf28; RF1; MuRF1
Mus musculus	MEEBO	ILMN_215179	ILMN_215179	CTTN	scl0013043.1_48	NM_007803.1			6681086	NM_007803.1	Cttn		ILMN_2695663	000050022	S	229	GAAAAGGAGCAGAGATGGGGTGCTAAAACCGTGCAGGGATCGGGGCACCA						The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_215179	ILMN_215179	CTTN	scl0013043.1_48	NM_007803.1			6681086	NM_007803.1	Cttn		ILMN_2695662	001450039	S	228	TGAAAAGGAGCAGAGATGGGGTGCTAAAACCGTGCAGGGATCGGGGCACC						The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_239692	ILMN_239692	CASS4	NM_001033538.2	NM_001033538.2		320664	118131077	NM_001033538.2	Cass4	NP_001028710.1	ILMN_3061615	002850563	I	3625	GTACTCAGGAAGCTAAGGAAGGGGGTGGGGAGTTTCAGGCCAATCTAGGC	2	+	172254948-172254997	2qH3	Mus musculus Cas scaffolding protein family member 4 (Cass4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-228E2.3	RP23-228E2.3
Mus musculus	RefSeq	ILMN_198116	ILMN_234360	LOC676748	XR_004961.1	XR_004961.1		676748	94374563	XR_004961.1	LOC676748		ILMN_1223192	005910484	S	1301	CACTCAGGTGATTTCAGTTCGTGAAGCCAACGCCATCCCAAGGCCTGAGG					PREDICTED: Mus musculus similar to PAP associated domain containing 4 (LOC676748), mRNA.					
Mus musculus	RefSeq	ILMN_222233	ILMN_222233	LAPTM4A	NM_008640.2	NM_008640.2		17775	109689715	NM_008640.2	Laptm4a	NP_032666.2	ILMN_1254173	005560411	S	1523	GAAATGGCTGTGAAGATTCCTGAGAAAGAGCCACCACCTCCTTACCTGCC	12	+	8944941-8944990	12qA1.1	Mus musculus lysosomal-associated protein transmembrane 4A (Laptm4a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MTP; LAPTM4; AA286466; mKIAA0108; Mtrp	MTP; LAPTM4; AA286466; mKIAA0108; Mtrp
Mus musculus	RefSeq	ILMN_221477	ILMN_221477	PPT1	NM_008917.2	NM_008917.2		19063	121674796	NM_008917.2	Ppt1	NP_032943.2	ILMN_2736168	000990064	S	762	GGCCAAGCTAAGGAAACCATTCCCCTCCAGGAGAGCACTCTATACACAGA	4	+	122533070-122533119	4qD2.2	Mus musculus palmitoyl-protein thioesterase 1 (Ppt1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IMP]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process whereby cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes [goid 6907] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein by individual cells [goid 44257] [evidence IMP]; The removal of palymitoyl groups from a lipoprotein [goid 2084] [evidence IMP]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence ISO]; The chemical reactions and pathways resulting in the breakdown of a macromolecule, any large molecule including proteins, nucleic acids and carbohydrates, as carried out by individual cells [goid 44265] [evidence IMP]; Any process that modulates the activity of the enzyme phospholipase A2 [goid 32429] [evidence IMP]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-protein + H2O = palmitate + protein [goid 8474] [evidence IMP]; Catalysis of the reaction: palmitoyl-protein + H2O = palmitate + protein [goid 8474] [evidence IDA]	CLN1; 9530043G02Rik; MGC107420; D4Ertd184e; INCL; AA960502; C77813; PPT	CLN1; 9530043G02Rik; MGC107420; D4Ertd184e; INCL; AA960502; C77813; PPT
Mus musculus	RefSeq	ILMN_226456	ILMN_226456	PHGDH	NM_016966.3	NM_016966.3		236539	52353954	NM_016966.3	Phgdh	NP_058662.2	ILMN_2790181	007560047	S	241	ACTTGAGCAAGGAGGAGCTGATAGCTGAACTCCAGGACTGTGAAGGCCTC	3	-	98138869-98138884:98143618-98143651	3qF2.2	Mus musculus 3-phosphoglycerate dehydrogenase (Phgdh), mRNA.		The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6564] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: 3-phosphoglycerate + NAD+ = 3-phosphohydroxypyruvate + NADH + H+ [goid 4617] [evidence TAS]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]	PGD; 3-PGDH; PGDH; 4930479N23; SERA; MGC113796; MGC117966; PGAD; A10; 3PGDH	PGD; 3-PGDH; PGDH; 4930479N23; SERA; MGC113796; MGC117966; PGAD; A10; 3PGDH
Mus musculus	MEEBO	ILMN_212440	ILMN_212440	A330008L17RIK	scl0234624.3_178	NM_175479.2			31341998	NM_175479.2	A330008L17Rik		ILMN_1259993	007050554	S	3000	GCAGAAAAACAGCCAACATACATGACTTGCCCAAAACACAGAATGTGGTG										
Mus musculus	RefSeq	ILMN_192099	ILMN_246706	MAN2B1	NM_010764.2	NM_010764.2		17159	113195689	NM_010764.2	Man2b1	NP_034894.2	ILMN_2484987	005890056	S	3102	GAAGGAGGGGCAGGCCTCCCCTTCTCTTGCTGTAACCATTCACAAAAATC	8	+	87621415-87621416:87621417-87621464	8qC3	Mus musculus mannosidase 2, alpha B1 (Man2b1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IMP]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IDA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IMP]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LAMAN; AW107687	LAMAN; AW107687
Mus musculus	RefSeq	ILMN_192099	ILMN_246706	MAN2B1	NM_010764.2	NM_010764.2		17159	113195689	NM_010764.2	Man2b1	NP_034894.2	ILMN_2707967	004610711	S	3022	CCCTACCTCAGTCACACTGAAGCCTATGGAAATACGTACCTTCCTGGCCT	8	+	87621335-87621384	8qC3	Mus musculus mannosidase 2, alpha B1 (Man2b1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IMP]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IDA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IMP]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LAMAN; AW107687	LAMAN; AW107687
Mus musculus	RefSeq	ILMN_244009	ILMN_244009	LARP4	NM_001024526.2	NM_001024526.2		207214	124358933	NM_001024526.2	Larp4	NP_001019697.2	ILMN_3021547	007210592	I	121	GGGCCCGGGCCTGGGAGCCAGTTGGAGTCGCGGCAGCGTGAACGATCGGG	15	+	99803331-99803380	15qF1	Mus musculus La ribonucleoprotein domain family, member 4 (Larp4), transcript variant 1, mRNA. XM_924121 XM_924125			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	DXErtd793; DXErtd793e; C530046N12; D330037H05Rik	DXErtd793; DXErtd793e; C530046N12; D330037H05Rik
Mus musculus	RefSeq	ILMN_244009	ILMN_244009	LARP4	NM_001024526.2	NM_001024526.2		207214	124358933	NM_001024526.2	Larp4	NP_001019697.2	ILMN_3093934	006400025	A	383	TAATGTATTCTCCATCTTGTGAAACCACAAGGAATACTGCAGATGTTGAA	15	+	99816511-99816560	15qF1	Mus musculus La ribonucleoprotein domain family, member 4 (Larp4), transcript variant 1, mRNA. XM_924121 XM_924125			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	DXErtd793; DXErtd793e; C530046N12; D330037H05Rik	DXErtd793; DXErtd793e; C530046N12; D330037H05Rik
Mus musculus	RefSeq	ILMN_212373	ILMN_212373	CARD11	NM_175362.1	NM_175362.1		108723	28202024	NM_175362.1	Card11	NP_780571.1	ILMN_1254529	007330731	S	3770	AGACGCCTGGTGGAAGGTCAGGCTCTGCTGGCGTGAACAGAGATGAGCAA	5	-	141349156-141349205	5qG2	Mus musculus caspase recruitment domain family, member 11 (Card11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; The process of T cell selection that occurs in the thymus [goid 45061] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IMP]; Any process that modulates the frequency, rate or extent of B cell differentiation [goid 45577] [evidence IMP]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BIMP3; 0610008L17Rik; 2410011D02Rik; CARMA1	BIMP3; 0610008L17Rik; 2410011D02Rik; CARMA1
Mus musculus	MEEBO	ILMN_195455	ILMN_195455	END3	scl00353311.1_181						End3		ILMN_2515704	003460138	S	13	GCCTAAGAGAATCAATGCTGTCATAGGCGAATTGGTTCAGATGCTGGATT										
Mus musculus	RefSeq	ILMN_208759	ILMN_208759	ESCO2	NM_028039.1	NM_028039.1		71988	33859705	NM_028039.1	Esco2	NP_082315.2	ILMN_2834065	007050768	S	2148	CCATGGTTGTCTCATGCTCCATCAGTAGACTCTAAACACCGGCTATGAGC	14	-	66438480-66438529	14qD1	Mus musculus establishment of cohesion 1 homolog 2 (S. cerevisiae) (Esco2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	D030072L07Rik; 2410004I17Rik	D030072L07Rik; 2410004I17Rik
Mus musculus	RefSeq	ILMN_197962	ILMN_197962	LOC239727	XM_156408.2	XM_156408.2			38079875	XM_156408.2	LOC239727		ILMN_1246061	001570132	S	1040	GGGTGGGAGGGATTTTGTTTGGTGCTGCCATATGCTGTGGACTGGCATTC										
Mus musculus	RefSeq	ILMN_202273	ILMN_251520	1700065A05RIK	XM_988719.1	XM_988719.1		329877	94371992	XM_988719.1	1700065A05Rik	XP_993813.1	ILMN_1243739	003840608	S	5821	GCCTTAAATGTGAAGCTGGAGGTGGGGCTCAGTGGTGGGGCACTTGTCTC				4qC4	PREDICTED: Mus musculus RIKEN cDNA 1700065A05 gene, transcript variant 16 (1700065A05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_226592	ILMN_226592	TSC2	NM_001039363.1	NM_001039363.1		22084	86439991	NM_001039363.1	Tsc2	NP_001034452.1	ILMN_3135566	006590373	A	5352	GCCAGCAGATCCATGACTAGAGTCCTGTGGCCAGCCATGTAGCTATCCTG	17	-	24733498-24733547	17qA3.3	Mus musculus tuberous sclerosis 2 (Tsc2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; A series of reactions, mediated by the intracellular phosphoinositide 3-kinase (PI3K). PI3K cascades lie downstream of many cell surface receptor linked signaling pathways and regulate numerous cellular functions [goid 14065] [evidence IMP]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IMP]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IGI]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a higher concentration, in a concentration gradient of a specific chemical [goid 50918] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14067] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IGI]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that activates or increases the activity of a GTPase [goid 43547] [evidence IEA]; Any process that modulates the frequency, rate or extent of insulin receptor signaling [goid 46626] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IMP]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence ISO]; Any process that reduces cell size [goid 45792] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tcs2	Tcs2
Mus musculus	RefSeq	ILMN_186561	ILMN_240517	AKR1C12	NM_013777.2	NM_013777.2		622402	85719329	NM_013777.2	Akr1c12	NP_038805.2	ILMN_1254015	001030048	S	151	GGCTGCATGCCTAGCTCTAGATGTTGGGTACCGCCATGTTGATACTGCTT	13	-	4275569-4275618	13qA1	Mus musculus aldo-keto reductase family 1, member C12 (Akr1c12), mRNA.		The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence TAS]	Catalysis of the NADPH-dependent reduction of carbonyl compounds [goid 4033] [evidence ISS]	AI266976; Akra	AI266976; Akra
Mus musculus	Riken	ILMN_205933	ILMN_205933	C130038I05RIK	ri|C130038I05|PX00169C16|AK048166|1128					AK048166	C130038I05Rik		ILMN_1253629	004490129	S	876	TCCAACACCATCACATCTCCGCTAGTTGGGCGTGCTTCAGGCCACCTTCC										
Mus musculus	RefSeq	ILMN_216160	ILMN_239481	AYTL1B	NM_027599.2	NM_027599.2		70902	141802365	NM_027599.2	Aytl1b	NP_081875.1	ILMN_1256667	000240204	S	2202	AACTCAGTGGTTTTTACTCTAAGTAACATGGATACTGTCTTGGAAAAAGC	5	+	107862049-107862098	5qE5	Mus musculus acyltransferase like 1B (Aytl1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	Riken	ILMN_202707	ILMN_202707	CLA3	ri|E430014N21|PX00098J15|AK088401|1382					AK088401	Cla3		ILMN_2551668	000380100	S	1	GGTCATGGAGGCTCAGTCTCGCAGCAGCCATTGAAGGGGAAGGAACTGCG										
Mus musculus	MEEBO	ILMN_191940	ILMN_191940	DNAJC10	scl20712.21_78				26190605	NM_024181	Dnajc10		ILMN_2759811	002340369	S	2505	TGGAAACGCTCCAAAGCCAAGTAAAAAGAAATAAGGATGAGCTTTGAGGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222167	ILMN_222167	SLC34A3	NM_080854.1	NM_080854.1		142681	18252793	NM_080854.1	Slc34a3	NP_543130.1	ILMN_1258111	006060386	S	1889	TACCATAGCCAGCTCCACTAGCTTCAGGGCATTGGAGGCGGGAGAGACCG	2	-	25084501-25084550	2qA3	Mus musculus solute carrier family 34 (sodium phosphate), member 3 (Slc34a3), mRNA.	The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	 [goid 15321] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NptIIc; MGC159029; AI649385	NptIIc; MGC159029; AI649385
Mus musculus	RefSeq	ILMN_187036	ILMN_260326	4930431J08RIK	XM_908801.3	XM_908801.3		73884	149234019	XM_908801.3	4930431J08Rik	XP_913894.3	ILMN_2440612	004730128	S	11141	GACTGGACAGCAGAGTTGCCTTTTAGAGTGTTCCTGTGGTTCACTTGAGT				1qC2	PREDICTED: Mus musculus RIKEN cDNA 4930431J08 gene (4930431J08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213743	ILMN_260326	4930431J08RIK	XM_908801.3	XM_908801.3		73884	149234019	XM_908801.3	4930431J08Rik	XP_913894.3	ILMN_1227216	003890017	S	297	GACTGACTAATCAAGATGCAGAAAAGGCAAGGGTATTGCAGCTATTGCCG				1qC2	PREDICTED: Mus musculus RIKEN cDNA 4930431J08 gene (4930431J08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_190408	ILMN_239146	DDX54	NM_028041.2	NM_028041.2		71990	55742726	NM_028041.2	Ddx54	NP_082317.1	ILMN_1237306	002190152	S	3473	GACCAGCCCAGCTGTCAACCCCATTGTCTACTTAACTGAGTTCATACTGA	5	+	121078143-121078192	5qF	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 (Ddx54), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	DP97; AI414901; 2410015A15Rik	DP97; AI414901; 2410015A15Rik
Mus musculus	RefSeq	ILMN_190408	ILMN_239146	DDX54	NM_028041.2	NM_028041.2		71990	55742726	NM_028041.2	Ddx54	NP_082317.1	ILMN_2689678	007610538	S	2767	CTGCTTTTGACTGGGACATTGGGTGACCTCTGAAAGGATGCATAGGAGTC	5	+	121077437-121077486	5qF	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 (Ddx54), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	DP97; AI414901; 2410015A15Rik	DP97; AI414901; 2410015A15Rik
Mus musculus	RefSeq	ILMN_217263	ILMN_217263	RAB7L1	NM_144875.1	NM_144875.1		226422	21450114	NM_144875.1	Rab7l1	NP_659124.1	ILMN_2681186	002970639	S	845	CCTCTGGCTGGACATGCTGCTAGTTCTGTTTGGCTCCTTTTCTATCCAGG	1	+	133769135-133769157:133769158-133769184	1qE4	Mus musculus RAB7, member RAS oncogene family-like 1 (Rab7l1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC36539; MGC28972	MGC36539; MGC28972
Mus musculus	RefSeq	ILMN_229782	ILMN_327974	4933416C03RIK	NR_003651.1	NR_003651.1		619332	153792620	NR_003651.1	4933416C03Rik		ILMN_3161693	004120475	S	1838	GGGTTACATAGCAGCTTCCAGGACACACTGGTTTATATAGATCTGCCGCA				10qD2	Mus musculus RIKEN cDNA 4933416C03 gene (4933416C03Rik), non-coding RNA.					
Mus musculus	RefSeq	ILMN_187145	ILMN_187145	TSGA10	NM_207228.2	NM_207228.2		211484	118131026	NM_207228.2	Tsga10	NP_997111.1	ILMN_2441548	000450273	S	3242	GCCCAGGCACCATGCGTTTTTACAGTTGTGTTTGCTCTTACTGTTGTGAG	1	-	37811729-37811778	1qB	Mus musculus testis specific 10 (Tsga10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence ISA]	4933432N21Rik; Gm217; Mtsga10	4933432N21Rik; Gm217; Mtsga10
Mus musculus	RefSeq	ILMN_187145	ILMN_187145	TSGA10	NM_207228.2	NM_207228.2		211484	118131026	NM_207228.2	Tsga10	NP_997111.1	ILMN_2501276	003890681	S	88	GGGGCTCCAGTTTCTGAAGCTGGAAGAAACCAGAATACTTTCCAACTAGA	1	-	37912138-37912187	1qB	Mus musculus testis specific 10 (Tsga10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence ISA]	4933432N21Rik; Gm217; Mtsga10	4933432N21Rik; Gm217; Mtsga10
Mus musculus	RefSeq	ILMN_196863	ILMN_196863	LOC380748	XM_354662.1	XM_354662.1			38049299	XM_354662.1	LOC380748		ILMN_1234684	001410703	S	487	CCCCAACTGCAGAAGGCAGCCTGCATCTACGAAGGAGAACTTTGTGCTGT										
Mus musculus	RefSeq	ILMN_213694	ILMN_213694	1700019M22RIK	NM_027076.2	NM_027076.2		69423	124378006	NM_027076.2	1700019M22Rik	NP_081352.1	ILMN_1246636	002320114	S	203	CCTGTTCCAAATGTAGCAAGAAGATAAGAAGGCCCACGGTGCAAAAGCCT	12	-	97285180-97285229	12qE	Mus musculus RIKEN cDNA 1700019M22 gene (1700019M22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_186793	ILMN_249715	VRK1	NM_001029843.1	NM_001029843.1		22367	71067121	NM_001029843.1	Vrk1	NP_001025014.1	ILMN_2490870	006420379	S	1497	AATTTTTTGTGTACTTTACTGAAGGGTAATTTATAAAATTCTGAATCTTT	12	+	107313393-107313442	12qF1	Mus musculus vaccinia related kinase 1 (Vrk1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	51PK	51PK
Mus musculus	RefSeq	ILMN_249715	ILMN_249715	VRK1	NM_001029843.1	NM_001029843.1		22367	71067121	NM_001029843.1	Vrk1	NP_001025014.1	ILMN_3123657	005220189	A	3491	CTGAAGTTGCATAGCATGGCCTCAGTGTGCCCTTTGTCTCCGTGTGCCCG	12	+	107315387-107315436	12qF1	Mus musculus vaccinia related kinase 1 (Vrk1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	51PK	51PK
Mus musculus	Riken	ILMN_205300	ILMN_205300	4832436M01RIK	ri|4832436M01|PX00313O04|AK029335|4305					AK029335	4832436M01Rik		ILMN_1236954	004120504	S	4215	ACTACTCGGGGGGTTGGGGGGTGTTTGTTAGTTTGTGTGTTTCTCTCCTG										
Mus musculus	RefSeq	ILMN_218199	ILMN_218199	KCNIP3	NM_019789.2	NM_019789.2		56461	31981036	NM_019789.2	Kcnip3	NP_062763.2	ILMN_2911729	006110088	S	2505	GAAAAGCCAAGGCCACGGGAAAAGGCCACCACTCTAACCTGCTGCATCCC	2	-	127282411-127282460	2qF1	Mus musculus Kv channel interacting protein 3, calsenilin (Kcnip3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IDA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IMP]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IPI]	KChIP3; DREAM; 4933407H12Rik; R74849; AI413860; Csen	KChIP3; DREAM; 4933407H12Rik; R74849; AI413860; Csen
Mus musculus	RefSeq	ILMN_184181	ILMN_234853	NHEDC1	NM_028946.2	NM_028946.2		74446	142369459	NM_028946.2	Nhedc1	NP_083222.1	ILMN_2622286	005670139	S	1837	GGCAGGAGCTATACCCACTGCGACAGTTTACCCACCCAACTGATGGCATA	3	+	135055812-135055861	3qG3	Mus musculus Na+/H+ exchanger domain containing 1 (Nhedc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]	4933424B12Rik; 4933425K02Rik; 1700094G20Rik; AV258602	4933424B12Rik; 4933425K02Rik; 1700094G20Rik; AV258602
Mus musculus	RefSeq	ILMN_199413	ILMN_199413	OLFR1154	NM_146647.1	NM_146647.1		258641	33239201	NM_146647.1	Olfr1154	NP_666858.1	ILMN_1228004	001500010	S	706	GGGTTCTCTACTTGTGCTTCTCACCTGACAGTAGTTACTATTTATCATGG	2	-	87743076-87743125	2qD	Mus musculus olfactory receptor 1154 (Olfr1154), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR173-2	MOR173-2
Mus musculus	RefSeq	ILMN_202604	ILMN_234078	9430038I01RIK	XM_917763.2	XM_917763.2		77252	94381366	XM_917763.2	9430038I01Rik	XP_922856.1	ILMN_1253929	005490167	S	318	CCTGAGGTGTATCTCGGGGGAGTCTGGCCATTTTAATCATACCGACAATC				7qF4	PREDICTED: Mus musculus RIKEN cDNA 9430038I01 gene, transcript variant 6 (9430038I01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_228374	ILMN_228374	EG625716	NM_001081318.1	NM_001081318.1		625716	124486774	NM_001081318.1	EG625716	NP_001074787.1	ILMN_3009047	004810068	S	1520	CAGCCACACCTGGCTACACGGTTCTTCTGAGATGTGTGGAGTCTGAAGAG	6	-	141930618-141930627:141930834-141930843:141934009-141934038	6qG2	Mus musculus predicted gene, EG625716 (EG625716), mRNA.					
Mus musculus	MEEBO	ILMN_211523	ILMN_211523	ETOS1	scl30598.1.1_146	NM_053258.1			16751838	NM_053258.1	Etos1		ILMN_1258533	003840661	S	1777	TGGTGGACTTCCTCCTCCACTGCAAAACCTGCCCAACCACACCTGGTGCT										
Mus musculus	Riken	ILMN_202060	ILMN_202060	2610206P12RIK	ri|2610206P12|ZX00061J13|AK011905|915					AK011905	2610206P12Rik		ILMN_1254093	004890376	S	372	GCAGGGGTCAGTTCAGTGTTTAGTTGGTTACTTTCACAACCCCCAAGGCT										
Mus musculus	RefSeq	ILMN_196847	ILMN_196847	LOC240120	XM_140084.1	XM_140084.1			20900787	XM_140084.1	LOC240120		ILMN_2526007	005690551	S	188	CACTTCACAGCCCTCGGTGTCTAGGGGAGCTGTCACTCATTCCTCACTAG										
Mus musculus	RefSeq	ILMN_216875	ILMN_216875	PECR	NM_023523.4	NM_023523.4		111175	142350282	NM_023523.4	Pecr	NP_076012.2	ILMN_1220354	002260561	S	1102	GGGGGATCACTTTAATGTTAATAGCTTTATCTTTGCAAAGACTGCTCCCA	1	-	72305770-72305819	1qC3	Mus musculus peroxisomal trans-2-enoyl-CoA reductase (Pecr), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The elongation of a fatty acid chain by the sequential addition of two-carbon units [goid 30497] [evidence ISA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: acyl-CoA + NADP+ = trans-2,3-dehydroacyl-CoA + NADPH + H+ [goid 19166] [evidence ISA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2400003B18Rik	2400003B18Rik
Mus musculus	RefSeq	ILMN_200574	ILMN_200574	LOC383368	XM_357012.1	XM_357012.1			38083864	XM_357012.1	LOC383368		ILMN_2539234	003440291	S	625	GCAGCCTGGCCCTTACAGCCCACTAAGGAATGCGCATTTGTTTCAGTTCA										
Mus musculus	RefSeq	ILMN_200203	ILMN_200203	LOC385934	XM_359004.1	XM_359004.1			38080898	XM_359004.1	LOC385934		ILMN_2537936	006130059	S	466	GTCCGTGCAAGTGACACTGGCTGTACTGAAGACATCTTCACCAGGAATAC										
Mus musculus	RefSeq	ILMN_250520	ILMN_250520	ADORA3	NM_009631.2	NM_009631.2		11542	110347603	NM_009631.2	Adora3	NP_033761.2	ILMN_3061260	004070014	I	1552	GTGGAAGCCTGACGTGAAGGCAATGCATCCCTGATTACCACGGACTCTGC				3qF2.2	Mus musculus adenosine A3 receptor (Adora3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IMP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IMP]	ARA3; 4930578J19Rik; 1700001D09Rik; MGC118217; A3AR; Gpcr2	ARA3; 4930578J19Rik; 1700001D09Rik; MGC118217; A3AR; Gpcr2
Mus musculus	MEEBO	ILMN_192858	ILMN_192858	C130099A20RIK	scl077444.1_67				23510308	NM_153420	C130099A20Rik		ILMN_1253926	003290544	S	20	CCCACCACAGTTCAGAACGTAGTTACTTTTCTCCTTGCCTTACCCAAACG										
Mus musculus	MEEBO	ILMN_194995	ILMN_194995	A930004D18RIK	scl077940.1_16						A930004D18Rik		ILMN_2511602	001440048	S	9	CGGCTATGGGTCCGACACAGAGTGCATTGCCAGATGCAAATGTACAGAGG										
Mus musculus	RefSeq	ILMN_201553	ILMN_309911	LOC100039595	XM_001473109.1	XM_001473109.1		100039595	149272780	XM_001473109.1	LOC100039595	XP_001473159.1	ILMN_1213657	000360612	S	904	TCTTGAAGTTGAAAAATCATAAAGTACAGAAACGTAAACATATAGGACTG	Y|NT_161902.3	-	41833-41861:41862-41882		PREDICTED: Mus musculus similar to spermiogenesis specific transcript on the Y 1, transcript variant 1 (LOC100039595), mRNA.					
Mus musculus	RefSeq	ILMN_198687	ILMN_238071	ADAMTS17	NM_001033877.4	NM_001033877.4		233332	148529019	NM_001033877.4	Adamts17	NP_001029049.2	ILMN_1251915	005260131	S	3214	CTCTCTCAAAGCCAGCAGCCTACAGACAGTGCCACCAGGAGGTCTGCAAC				7qC	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 17 (Adamts17), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199073	ILMN_199073	LOC237512	XM_137226.3	XM_137226.3			38090752	XM_137226.3	LOC237512		ILMN_2533952	002030551	S	234	AGGCAAACGCCAGGTCCTCATCAGGCCTCGTTCTAAAGTCATCATTCAGC										
Mus musculus	MEEBO	ILMN_210974	ILMN_210974	STRM	scl020904.9_73	NM_011501.1			6755683	NM_011501.1	Strm		ILMN_1245677	001940672	S	2356	AGATTAGTGAGAAGTTGAAGCTGACCCACCATGGATTCCCATGTGTTGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]		
Mus musculus	RefSeq	ILMN_190937	ILMN_220562	MLLT3	NM_027326.3	NM_027326.3		70122	114205415	NM_027326.3	Mllt3	NP_081602.3	ILMN_2474596	003850521	S	5743	CCACTGCTGTCTGTACACTGTAAATATGTATTTTGGCACTTGTACTCCAG	4	-	87416148-87416197	4qC4	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 (Mllt3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D4Ertd321e; 2610012I03Rik; 2210011H10Rik; Af9; 3830408D16Rik	D4Ertd321e; 2610012I03Rik; 2210011H10Rik; Af9; 3830408D16Rik
Mus musculus	RefSeq	ILMN_220562	ILMN_220562	MLLT3	NM_027326.3	NM_027326.3		70122	114205415	NM_027326.3	Mllt3	NP_081602.3	ILMN_3035795	001110112	I	1113	TAACTTACTCACCGTCACCAGTGGGCAGCAGGACAAGAAGGCGCCCAGCA	4	-	87486863-87486912	4qC4	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 (Mllt3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D4Ertd321e; 2610012I03Rik; 2210011H10Rik; Af9; 3830408D16Rik	D4Ertd321e; 2610012I03Rik; 2210011H10Rik; Af9; 3830408D16Rik
Mus musculus	RefSeq	ILMN_221158	ILMN_220562	MLLT3	NM_027326.3	NM_027326.3		70122	114205415	NM_027326.3	Mllt3	NP_081602.3	ILMN_2750605	006960484	S	3139	CTTTGGGGAAAAATTCTTGGTTATTCTGCCATGAGAGACTATGTATTCAC	4	-	87418752-87418801	4qC4	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 (Mllt3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D4Ertd321e; 2610012I03Rik; 2210011H10Rik; Af9; 3830408D16Rik	D4Ertd321e; 2610012I03Rik; 2210011H10Rik; Af9; 3830408D16Rik
Mus musculus	RefSeq	ILMN_220562	ILMN_220562	MLLT3	NM_027326.3	NM_027326.3		70122	114205415	NM_027326.3	Mllt3	NP_081602.3	ILMN_1252757	000160333	S	1836	GGTAGAGCTCCACAGAAGGTTAATGACACTGAGGGAACGACACATTCTGC	4	-	87428195-87428244	4qC4	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 (Mllt3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D4Ertd321e; 2610012I03Rik; 2210011H10Rik; Af9; 3830408D16Rik	D4Ertd321e; 2610012I03Rik; 2210011H10Rik; Af9; 3830408D16Rik
Mus musculus	RefSeq	ILMN_220299	ILMN_220299	BC048679	NM_183143.1	NM_183143.1		210321	34147158	NM_183143.1	BC048679	NP_898966.1	ILMN_2815651	002190414	S	250	GTGTTTACTGCGGCCAAGGAGAGATCATACACTTTGAGGGCGCGGTGGCG	7	-	81368757-81368768:81369092-81369129	7qD3	Mus musculus cDNA sequence BC048679 (BC048679), mRNA.					
Mus musculus	RefSeq	ILMN_208806	ILMN_260740	OLFR801	NM_146285.1	NM_146285.1		258282	22129718	NM_146285.1	Olfr801	NP_666397.1	ILMN_1259762	005260242	S	601	GCTCTCATGACACTTGTCATCACCTTGATCTTAGTTATTCTTTCCTACAC	10	-	129106923-129106972	10qD3	Mus musculus olfactory receptor 801 (Olfr801), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR110-10	MOR110-10
Mus musculus	RefSeq	ILMN_212653	ILMN_212653	ITGAE	NM_172944.2	NM_172944.2		16407	144227222	NM_172944.2	Itgae	NP_766532.1	ILMN_2656090	002490382	S	3088	GGGAGTCTGTGATTGCATCGCTTTCCAAAGACTACAGATTCTCAAAGATA	11	+	72947611-72947660	11qB4	Mus musculus integrin alpha E, epithelial-associated (Itgae), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	A530055J10; CD103; alpha-E1	A530055J10; CD103; alpha-E1
Mus musculus	RefSeq	ILMN_212653	ILMN_212653	ITGAE	NM_172944.2	NM_172944.2		16407	144227222	NM_172944.2	Itgae	NP_766532.1	ILMN_2628900	005700017	S	2683	CCAAGCCAGTTGCTTCTGTCCTGGTCATGAACTGCAAGATTGGTCACCCC	11	+	72944456-72944505	11qB4	Mus musculus integrin alpha E, epithelial-associated (Itgae), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	A530055J10; CD103; alpha-E1	A530055J10; CD103; alpha-E1
Mus musculus	Riken	ILMN_203231	ILMN_203231	C030030I18RIK	ri|C030030I18|PX00074P15|AK047768|1362					AK047768	C030030I18Rik		ILMN_1258081	001580056	S	1110	CACGTGTCACCACAGAGTCATCCCTTCAGTTCCCTCGGGCAAAGATCATT										
Mus musculus	RefSeq	ILMN_220900	ILMN_220900	KLHL24	NM_029436.3	NM_029436.3		75785	46447824	NM_029436.3	Klhl24	NP_083712.4	ILMN_2860244	003440181	S	6395	AGCCAGTTTGAGGTCAGAGTTGGCCACATGAATTCCCATGTGAGAAACAG	16	+	20127529-20127578	16qA3	Mus musculus kelch-like 24 (Drosophila) (Klhl24), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6530402O20Rik; C85082; 4930429H24Rik; 1110046J11Rik	6530402O20Rik; C85082; 4930429H24Rik; 1110046J11Rik
Mus musculus	RefSeq	ILMN_220900	ILMN_220900	KLHL24	NM_029436.3	NM_029436.3		75785	46447824	NM_029436.3	Klhl24	NP_083712.4	ILMN_2860242	003290193	S	6275	AACGATTTGGTCTTGCTGGAGTTAGTGGTACAGAGCTGAGTGTGGTGGCA	16	+	20127409-20127458	16qA3	Mus musculus kelch-like 24 (Drosophila) (Klhl24), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6530402O20Rik; C85082; 4930429H24Rik; 1110046J11Rik	6530402O20Rik; C85082; 4930429H24Rik; 1110046J11Rik
Mus musculus	Riken	ILMN_203256	ILMN_203256	2610022G08RIK	ri|4831412O21|PX00102O14|AK029193|2009					AK029193	2610022G08Rik		ILMN_2555908	005260093	S	1785	GCAGGTTCTGAGGTTCAGTGACTCACAGGATGTGTGTTCTCCCAGTTCTC										
Mus musculus	MEEBO	ILMN_217838	ILMN_217838	ATP2B2	scl28534.23.1_70	NM_009723.1			6753139	NM_009723.1	Atp2b2		ILMN_2688213	003170148	S	3647	TAAATGAGGATGTGGAAGAGATAGACCACGCAGAGCGGGAGCTTCGCCGT						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate [goid 46068] [evidence IMP]; The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42428] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The precipitation of specific crystal forms of calcium carbonate with extracellular matrix proteins in the otolith organs of the vertebrate inner ear [goid 45299] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the size of a cell [goid 8361] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IMP]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structure of the cerebellar Purkinje cell layer is generated and organized. Morphogenesis pertains to the creation of form. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21692] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51928] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of calcium ion (Ca2+) [goid 30899] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of calcium (Ca) ions from one side of a membrane to the other [goid 15085] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216899	ILMN_216899	A2BP1	scl0001788.1_11	NM_021477.2			34556189	NM_021477.2	A2bp1		ILMN_1238309	003710209	S	1899	GGAGAGAGGAAGCTTTCCGAGGCCTGAGTGTTGCATCACATGCAGTAGGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	Riken	ILMN_203209	ILMN_203209	B230214C11RIK	ri|B230214C11|PX00069H20|AK045597|3248					AK045597	B230214C11Rik		ILMN_1232699	007040746	S	3017	CCTCTTGGACAGAAGGTGGTCTGGGCAGGTCAGGGTATGGGTCACTGGGA										
Mus musculus	RefSeq	ILMN_209403	ILMN_209403	SALL4	NM_175303.3	NM_175303.3		99377	117553630	NM_175303.3	Sall4	NP_780512.2	ILMN_2676148	000110139	S	1849	GCAACTAGTGGAGAACATAGACAAGGCCACTACTGACCCCAACGAGTGTC	2	-	168580692-168580741	2qH3	Mus musculus sal-like 4 (Drosophila) (Sall4), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C330011P20Rik; AW536104; Tex20; AA407717; C78563; AL022809; 5730441M18Rik; C78083	C330011P20Rik; AW536104; Tex20; AA407717; C78563; AL022809; 5730441M18Rik; C78083
Mus musculus	RefSeq	ILMN_209403	ILMN_209403	SALL4	NM_175303.3	NM_175303.3		99377	117553630	NM_175303.3	Sall4	NP_780512.2	ILMN_2595478	007330551	S	3492	CCTGATATGCAAGTGATGTGGCTTGTGACCATAGCCTTGGGCAATCCTAC	2	-	168575363-168575412	2qH3	Mus musculus sal-like 4 (Drosophila) (Sall4), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C330011P20Rik; AW536104; Tex20; AA407717; C78563; AL022809; 5730441M18Rik; C78083	C330011P20Rik; AW536104; Tex20; AA407717; C78563; AL022809; 5730441M18Rik; C78083
Mus musculus	Riken	ILMN_205973	ILMN_205973	DDX26	ri|D130058C17|PX00185E04|AK051573|2962					AK051573	Ddx26		ILMN_2576590	005090221	S	2383	GCCCTACGGATGAGCACCGCTTTGGTAGCAATTAGGTTTTATTCACCTGG										
Mus musculus	Riken	ILMN_202471	ILMN_202471	ITGA6	ri|5830464I15|PX00040B02|AK018033|1542					AK018033	Itga6		ILMN_1223670	001690129	S	1358	TGGTGAGAAAAGGAGACATTGGGGCGTGGGAGGAAAATGTCCCATGGTTC						The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits [goid 33627] [evidence IDA]; Any process that activates or increases the rate or extent of cell adhesion to another cell [goid 22409] [evidence IDA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IMP]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IGI]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IPI]		
Mus musculus	RefSeq	ILMN_185696	ILMN_225998	DNAHC1	XM_918655.2	XM_918655.2		110084	94396810	XM_918655.2	Dnahc1	XP_923748.2	ILMN_2429227	003290291	S	6052	ATCCTAGGGCTCATGCCATTCGTTGAGTGCTGGCTAAAACGTCTCCCTGC				14qB	PREDICTED: Mus musculus dynein, axonemal, heavy chain 1 (Dnahc1), mRNA.	A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IMP]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence TAS]		
Mus musculus	RefSeq	ILMN_219927	ILMN_225998	DNAHC1	XM_918655.2	XM_918655.2		110084	94396810	XM_918655.2	Dnahc1	XP_923748.2	ILMN_2715311	003370315	S	1336	GAAGTGAACCTGGACTACGAACGTAGCATGAACAAGATCAACTTTGACCA				14qB	PREDICTED: Mus musculus dynein, axonemal, heavy chain 1 (Dnahc1), mRNA.	A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IMP]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence TAS]		
Mus musculus	Riken	ILMN_203698	ILMN_203698	SEMA4F	ri|9630025H20|PX00115D13|AK035993|2719					AK035993	Sema4f		ILMN_1222378	004560082	S	2371	GCACAGGGACTTGTGAGATACCTGTCCTACTGTGGCCAACTTTGAGGCCG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence ISA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence ISA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_208747	ILMN_245330	PSG-PS1	NR_002857.1	NR_002857.1		232919	84872155	NR_002857.1	Psg-ps1		ILMN_2589126	006580551	S	1777	AAAGGCATCAAGGATTTAAGTTGTGGCTCAAATATATAGCCAGTCATCAG	7	+	18267264-18267313	7qA2	Mus musculus pregnancy specific glycoprotein pseudogene 1 (Psg-ps1), non-coding RNA. XR_000491 XR_000492 XR_000493				Cea-6; AV036018; Cea6	Cea-6; AV036018; Cea6
Mus musculus	RefSeq	ILMN_197229	ILMN_312319	LOC227885	XR_034341.1	XR_034341.1		227885	149249314	XR_034341.1	LOC227885		ILMN_2527380	006060364	S	1595	TGGTGACTAAGGAGGGACTGGAGCTATCAGAGGATGAGGAAGAGGAGAAG	2	+	50766798-50766847	2qC1.1	PREDICTED: Mus musculus similar to Hsp90ab1 protein (LOC227885), misc RNA.					
Mus musculus	RefSeq	ILMN_215866	ILMN_215866	NCDN	NM_011986.2	NM_011986.2		26562	31560512	NM_011986.2	Ncdn	NP_036116.2	ILMN_2762509	002070019	S	3339	CCAGGAACAAGAGGTCACCCCACCCTAGAATCCGCATGGTTTCCCTGTGA	4	-	126421236-126421285	4qD2.2	Mus musculus neurochondrin (Ncdn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU042419; mKIAA0607; MMS10-AE; Ms10ae; norbin	AU042419; mKIAA0607; MMS10-AE; Ms10ae; norbin
Mus musculus	RefSeq	ILMN_215866	ILMN_215866	NCDN	NM_011986.2	NM_011986.2		26562	31560512	NM_011986.2	Ncdn	NP_036116.2	ILMN_2664579	002570180	S	340	TGTCGTTCGACTTCATCAATGTCGTGTTGTGACCTGGCTGCGGCGGGACA	4	-	126429325-126429325:126430215-126430247:126430248-126430263	4qD2.2	Mus musculus neurochondrin (Ncdn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU042419; mKIAA0607; MMS10-AE; Ms10ae; norbin	AU042419; mKIAA0607; MMS10-AE; Ms10ae; norbin
Mus musculus	RefSeq	ILMN_215866	ILMN_215866	NCDN	NM_011986.2	NM_011986.2		26562	31560512	NM_011986.2	Ncdn	NP_036116.2	ILMN_1231405	002760634	S	3361	CCCTAGAATCCGCATGGTTTCCCTGTGATTGCACTCCACTGCTACCATGG	4	-	126421214-126421263	4qD2.2	Mus musculus neurochondrin (Ncdn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU042419; mKIAA0607; MMS10-AE; Ms10ae; norbin	AU042419; mKIAA0607; MMS10-AE; Ms10ae; norbin
Mus musculus	RefSeq	ILMN_215866	ILMN_215866	NCDN	NM_011986.2	NM_011986.2		26562	31560512	NM_011986.2	Ncdn	NP_036116.2	ILMN_2864497	000830315	S	3435	CAATCCCTGCTAAGCCTCTACTCTGCAGGGAGACGCGACTGGCGGCTCCA	4	-	126421140-126421189	4qD2.2	Mus musculus neurochondrin (Ncdn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU042419; mKIAA0607; MMS10-AE; Ms10ae; norbin	AU042419; mKIAA0607; MMS10-AE; Ms10ae; norbin
Mus musculus	RefSeq	ILMN_199928	ILMN_199928	LOC384082	XM_357408.1	XM_357408.1			38079017	XM_357408.1	LOC384082		ILMN_1257628	003290600	S	177	TGCCAGATCAGAGGTGCTGTTGGGCTGGGAAATGGGTAGGAGCGGGACAG										
Mus musculus	RefSeq	ILMN_198164	ILMN_315916	GM318	XM_001481303.1	XM_001481303.1		545204	149269325	XM_001481303.1	Gm318	XP_001481353.1	ILMN_1240736	003850711	S	1513	GCTGCTTCAAGAGAATGAGCAAGAGAATCAGGGCTTGCCTGTCACAACTC				17qB1	PREDICTED: Mus musculus gene model 318, (NCBI) (Gm318), mRNA.					
Mus musculus	Riken	ILMN_205088	ILMN_205088	D630011D02RIK	ri|D630011D02|PX00196H24|AK052644|1723					AK052644	D630011D02Rik		ILMN_2569894	004040392	S	1006	GGTAGGGGTTGTCACTTGTCAGAGATGTCCTGAAAGGAAGTGCCTCAAGG										
Mus musculus	MEEBO	ILMN_211527	ILMN_211527	5930422O12RIK	scl33927.1_156	NM_176978.2			31342508	NM_176978.2	5930422O12Rik		ILMN_2616694	004070458	S	1985	GCATTTGATTGAATATCACCTTAGCCCATTAGAGTAACAACATCAGGTCG										
Mus musculus	MEEBO	ILMN_211527	ILMN_211527	5930422O12RIK	scl33927.1_156	NM_176978.2			31342508	NM_176978.2	5930422O12Rik		ILMN_2681958	004180162	S	3029	CTCAGAATAAAGAAGGGGCATGGGCATAAAGTACTACTGCCAGTCTGGGA										
Mus musculus	MEEBO	ILMN_211527	ILMN_211527	5930422O12RIK	scl33927.1_156	NM_176978.2			31342508	NM_176978.2	5930422O12Rik		ILMN_1255546	001230685	S	3038	AAGAAGGGGCATGGGCATAAAGTACTACTGCCAGTCTGGGAGCTATTGGC										
Mus musculus	Riken	ILMN_207224	ILMN_207224	D530050H15RIK	ri|D530050H15|PX00673K14|AK085249|1757					AK085249	D530050H15Rik		ILMN_1219094	000290608	S	1672	GCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAG										
Mus musculus	RefSeq	ILMN_246426	ILMN_246426	LOC382106	NM_001013776.1	NM_001013776.1		382106	62945397	NM_001013776.1	LOC382106	NP_001013798.1	ILMN_3054831	003310201	I	242	TGTTTACCGAACATGGCAAGAACACGTCAAGTCCCGGGCAATTCCAGAAG	9	-	109482220-109482269	9qF2	Mus musculus hypothetical protein LOC382106 (LOC382106), mRNA.					
Mus musculus	RefSeq	ILMN_246426	ILMN_246426	LOC382106	NM_001013776.1	NM_001013776.1		382106	62945397	NM_001013776.1	LOC382106	NP_001013798.1	ILMN_3131601	007330487	A	1172	CAGCCCAGAAATGATTGTGAGACTATGGGTGGACCCCGTTCATGTCATCA	9	-	109462454-109462476:109462767-109462793	9qF2	Mus musculus hypothetical protein LOC382106 (LOC382106), mRNA.					
Mus musculus	RefSeq	ILMN_212484	ILMN_212484	CCR10	NM_007721.4	NM_007721.4		12777	113865996	NM_007721.4	Ccr10	NP_031747.2	ILMN_1230042	006770215	S	979	ACCTGCGGAGGCTGCTCCAGGGCGGAGGATGCAGCCCGAAGCCCAACCCT	11	-	101035008-101035057	11qD	Mus musculus chemokine (C-C motif) receptor 10 (Ccr10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with chemokines, small chemoattractant molecules normally used to stimulate leukocytes, to initiate a change in cell activity [goid 4950] [evidence IDA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IDA]	MGC151420; Gpr2; Cmkbr9	MGC151420; Gpr2; Cmkbr9
Mus musculus	RefSeq	ILMN_217017	ILMN_217017	1700012A03RIK	NM_029587.2	NM_029587.2		76382	142343827	NM_029587.2	1700012A03Rik	NP_083863.1	ILMN_2678187	005900343	S	694	GAGAGGAGAAGGTTGCTGTAAAAGCCACTGTAGAGACAAGTGTAGCACCT	6	+	32008691-32008740	6qA3.3	Mus musculus RIKEN cDNA 1700012A03 gene (1700012A03Rik), mRNA.				MGC107242; AI429084	MGC107242; AI429084
Mus musculus	Riken	ILMN_205455	ILMN_205455	4732488M06RIK	ri|4732488M06|PX00052O19|AK029073|2617					AK029073	4732488M06Rik		ILMN_1234263	004040301	S	2267	GAGGAGCACCCCCTCCCCCACACAATAATGCTTTGCAGCAGGAAGAGCGA										
Mus musculus	RefSeq	ILMN_209908	ILMN_209908	SQLE	NM_009270.3	NM_009270.3		20775	118130480	NM_009270.3	Sqle	NP_033296.1	ILMN_2737163	006450056	S	2224	CTGTATTTTAAACTTGGTGGAGAGTGTGTGACCGGTCCTGTTGGGTTGCT	15	+	59161327-59161376	15qD1	Mus musculus squalene epoxidase (Sqle), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the formation of a 2,3-epoxide in squalene [goid 4506] [evidence IEA]	AI323792	AI323792
Mus musculus	RefSeq	ILMN_209908	ILMN_209908	SQLE	NM_009270.3	NM_009270.3		20775	118130480	NM_009270.3	Sqle	NP_033296.1	ILMN_2600348	000290168	S	1081	GCAGCTACCTCAGTGTCGACCTCGTTCGTGACGGACCCGGAAGTGATCAT	15	+	59149393-59149442	15qD1	Mus musculus squalene epoxidase (Sqle), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the formation of a 2,3-epoxide in squalene [goid 4506] [evidence IEA]	AI323792	AI323792
Mus musculus	MEEBO	ILMN_195196	ILMN_195196	D930040M24RIK	scl50547.13.1_290				31343231	NM_177278	D930040M24Rik		ILMN_1235585	006520095	S	1	GTCAATGGGAACATATCACCTTTTCTATCCTAAATTTTCAGGGGCGGGTT										
Mus musculus	Riken	ILMN_204830	ILMN_204830	C530043J03RIK	ri|C530043J03|PX00083O15|AK049708|2421					AK049708	C530043J03Rik		ILMN_1242104	004640228	S	2072	GTTCCAGTGTGTGGCTACCTCTGCTGATGGCTGGTTCCAGTGTGTGGCCT										
Mus musculus	Riken	ILMN_206634	ILMN_206634	4921505L17RIK	ri|4921505L17|PX00313D10|AK076554|1991					AK076554	4921505L17Rik		ILMN_1219760	002360564	S	1127	CCCGGGAAATCTCTGCCTTTGTGTCAGACTTCACTGCAAACCAGGTCTAT										
Mus musculus	RefSeq	ILMN_219150	ILMN_225176	AI480653	NM_198626.1	NM_198626.1		268880	38348493	NM_198626.1	AI480653	NP_941028.1	ILMN_2704927	005550168	S	2559	GCCGGGCCCAGTTCCTCTGTTCTCCTTGCTACTTGATTTCCTATTCATAG	16	-	30956039-30956088	16qB2	Mus musculus expressed sequence AI480653 (AI480653), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC19367	MGC19367
Mus musculus	Riken	ILMN_202906	ILMN_202906	PTPRS	ri|6430703F15|PX00048O19|AK032604|2338					AK032604	Ptprs		ILMN_1241523	007510209	S	2245	GTGCGCATCAAACCCCCTTTACATCCCTCAGAGCTTCGAGAAGGTTGGTG								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]		
Mus musculus	MEEBO	ILMN_222577	ILMN_222577	RRH	scl21521.8.1_57	NM_009102.2			31560639	NM_009102.2	Rrh		ILMN_1222375	003440477	S	1416	TGACACCCCAGACCCAGAATTAAACATAGCTTTGAACAGAGACAATTGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190992	ILMN_246799	4930503E24RIK	XR_001631.2	XR_001631.2		75030	149261203	XR_001631.2	4930503E24Rik		ILMN_2475129	002570609	S	1224	GCCTAGGGAACTGGATTTTCATTCCCAATGGGGAAGTTGCTGACAGGAGG	10	+	123961435-123961484	10qD2	PREDICTED: Mus musculus RIKEN cDNA 4930503E24 gene (4930503E24Rik), misc RNA.					
Mus musculus	Riken	ILMN_202050	ILMN_202050	NUDEL-PENDING	ri|2600006O07|ZX00060D03|AK011168|1653					AK011168	Nudel-pending		ILMN_2546624	002370376	S	1321	GGTTTCCAAGGAGTTTGCTGCCCCTGGAATCTACAGCTTCTTTCCTGGGC										
Mus musculus	RefSeq	ILMN_199429	ILMN_199429	IFNA6	NM_206871.1	NM_206871.1		15969	46047422	NM_206871.1	Ifna6	NP_996754.1	ILMN_1230562	001500577	S	30	TTTGGTGGTGTTGAGCTACTGGTCAACCTGCTCTCTAGGATGTGACCTGC	4	+	88473349-88473398	4qC4	Mus musculus interferon alpha 6 (Ifna6), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	Ifa6; Ifna8; Ifa8; IFNa8/6	Ifa6; Ifna8; Ifa8; IFNa8/6
Mus musculus	RefSeq	ILMN_199429	ILMN_199429	IFNA6	NM_206871.1	NM_206871.1		15969	46047422	NM_206871.1	Ifna6	NP_996754.1	ILMN_2769622	000450592	S	181	TTCCCCTTGGAGAAGTGGGATGCCCAGCAGATCCAGGAGGCTCAAGCCAT	4	+	88473500-88473549	4qC4	Mus musculus interferon alpha 6 (Ifna6), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	Ifa6; Ifna8; Ifa8; IFNa8/6	Ifa6; Ifna8; Ifa8; IFNa8/6
Mus musculus	RefSeq	ILMN_199429	ILMN_199429	IFNA6	NM_206871.1	NM_206871.1		15969	46047422	NM_206871.1	Ifna6	NP_996754.1	ILMN_2845312	005820189	S	339	TCAGCAGCTCAATGACCTCAAAGCCTGTGTGATGCAGGAGGTGGGGGTGC	4	+	88473658-88473707	4qC4	Mus musculus interferon alpha 6 (Ifna6), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	Ifa6; Ifna8; Ifa8; IFNa8/6	Ifa6; Ifna8; Ifa8; IFNa8/6
Mus musculus	Riken	ILMN_206552	ILMN_206552	D630022P03RIK	ri|D630022P03|PX00197D17|AK085408|1338					AK085408	D630022P03Rik		ILMN_2580947	001780181	S	1082	GCTAAGCATGGCACCTTTAATCCCAGCACACCATAGGGATCTCTGAGTTC										
Mus musculus	RefSeq	ILMN_222994	ILMN_222994	IPPK	NM_199056.2	NM_199056.2		75678	133892241	NM_199056.2	Ippk	NP_951011.1	ILMN_2757838	006280243	S	2481	CTCCTAGCTGGCACTGAGAATTCTACGGGGTCACCAGAAGTGTGCCTGGC	13	+	49558064-49558113	13qA5	Mus musculus inositol 1,3,4,5,6-pentakisphosphate 2-kinase (Ippk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate = ADP + 1D-myo-inositol hexakisphosphate [goid 35299] [evidence IEA]	InsP6; 1810043M15Rik	InsP6; 1810043M15Rik
Mus musculus	RefSeq	ILMN_210231	ILMN_210231	OLFR796	NM_146931.1	NM_146931.1		258933	22129046	NM_146931.1	Olfr796	NP_667142.1	ILMN_1237133	007040037	S	652	TCTTATGCCCGCATCCTGGGAGCCATCCTGGCAATTGCTTCTAGCCAGAG	10	-	129044834-129044883	10qD3	Mus musculus olfactory receptor 796 (Olfr796), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR269-1	MOR269-1
Mus musculus	MEEBO	ILMN_192136	ILMN_192136	9530018I07RIK	scl16861.2.1270_90						9530018I07Rik		ILMN_2485340	001300121	S	15	CAGCCCAAGGAACCCCTTTGCTAGGTTGCACCAGGTTCTTTTCTCTGCAC										
Mus musculus	RefSeq	ILMN_190887	ILMN_190887	PRP15	NM_019629.1	NM_019629.1		56290	11602911	NM_019629.1	Prp15	NP_062603.1	ILMN_2474137	003450131	S	512	CTCCCTCCTGTTTTTCAACTGTCACGGCAGGGTCAGAACTGGAGATTCAC					Mus musculus proline-rich protein 15 (Prp15), mRNA.				Prpb; 15kDa	Prpb; 15kDa
Mus musculus	MEEBO	ILMN_194267	ILMN_194267	5730593N15RIK	scl39225.12.1_42				31340756	NM_175263	5730593N15Rik		ILMN_2692527	001400528	S	2469	TGTAACTACCTCCTCTACACATCCCCAGGCTCTGGTGACCAGCGAGAATG										
Mus musculus	RefSeq	ILMN_226603	ILMN_226603	JAK2	NM_001048177.1	NM_001048177.1		16452	114326477	NM_001048177.1	Jak2	NP_001041642.1	ILMN_3115162	005310050	A	3553	AGAGCTACTGAAGAGCAACGGAAGATTGCCAAGGCCAGAAGGATGCCCAG	19	+	29385477-29385526	19qC1	Mus musculus Janus kinase 2 (Jak2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IMP]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The transport of dimerized STAT (Signal Transducers and Activators of Transcription) proteins into the nucleus following activation by members of the janus activated kinase (JAK) family of tyrosine kinases [goid 7262] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 7260] [evidence IMP]; The process of introducing a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 7260] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43392] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the interleukin-12 receptor [goid 5143] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA];  [goid 4718] [evidence IDA];  [goid 4718] [evidence IMP]	Fd17; AI504024; C81284	Fd17; AI504024; C81284
Mus musculus	RefSeq	ILMN_212989	ILMN_212989	PSMC4	NM_011874.2	NM_011874.2		23996	124248576	NM_011874.2	Psmc4	NP_036004.2	ILMN_2632349	005050563	S	1348	CCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTT	7	-	28826759-28826808	7qA3	Mus musculus proteasome (prosome, macropain) 26S subunit, ATPase, 4 (Psmc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MIP224; CIP21; MGC103150	MIP224; CIP21; MGC103150
Mus musculus	MEEBO	ILMN_193396	ILMN_193396	0710007G10RIK	scl27459.1.1_117						0710007G10Rik		ILMN_1237581	000650181	S	2	GCAGCTTCCTTAGGTCTTATCCCACTGTTGGTGCTCTAGTCTGTATGTTC										
Mus musculus	Riken	ILMN_204048	ILMN_204048	FAAH	ri|A830060M14|PX00155J16|AK043963|2759					AK043963	Faah		ILMN_1229163	005050377	S	2565	AAGCCAGCAACATCTACTGGTCGGATTGGGACCTTCAGGGGCTTCCCCAC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185808	ILMN_325244	LOC100048247	XM_001480117.1	XM_001480117.1		100048247	149270762	XM_001480117.1	LOC100048247	XP_001480167.1	ILMN_1234513	002100242	S	5660	GCTGTCTTGTTCAGAATGGGGTTGGGGGCCTAAGTGTCCTTATGAAGCTG					PREDICTED: Mus musculus similar to polycomb group ring finger 5, transcript variant 1 (LOC100048247), mRNA.					
Mus musculus	RefSeq	ILMN_215160	ILMN_261904	IRGC1	NM_199013.2	NM_199013.2		210145	134031979	NM_199013.2	Irgc1	NP_950178.2	ILMN_2656211	006760288	S	1398	CTACTCGCAGTCCTCAGATGGTGCCATGCGGGTGGCCCGTGCCTTTGAGA	7	-	25217328-25217377	7qA3	Mus musculus immunity-related GTPase family, cinema 1 (Irgc1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Gm474; F630044M05Rik; Gm1102; Iigp5	Gm474; F630044M05Rik; Gm1102; Iigp5
Mus musculus	Riken	ILMN_202127	ILMN_202127	2900016J09RIK	ri|2900016J09|ZX00068E14|AK013540|2555					AK013540	2900016J09Rik		ILMN_1226108	005860468	S	2401	GTGCTGCTGACAGACCTTACATTGCTCATGGTGTTGTGATCTGTGATCTG										
Mus musculus	MEEBO	ILMN_186419	ILMN_186419	DNASE2A	scl33568.4.1_64				40538815	NM_010062	Dnase2a		ILMN_2435392	005670017	S	13	GTGCAATCGGATGGACGGCAGCCTTGCTACTCTATGGTGCATCCAGAGGG						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IMP]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products [goid 4531] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186419	ILMN_186419	DNASE2A	scl33568.4.1_64				40538815	NM_010062	Dnase2a		ILMN_2627328	006590626	S	3358	AAGGACCGGTTCAAAGAGGACAGCGATCGACTGGTGTGCAGCAGGTTCGA						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IMP]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products [goid 4531] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213240	ILMN_312362	LOC100044756	XM_001472989.1	XM_001472989.1		100044756	149265193	XM_001472989.1	LOC100044756	XP_001473039.1	ILMN_2707808	002000372	S	2792	GGCAAGCTGAGTTATACCTTTACCTCAGTCTATGGGCTCCTCACACCTAG					PREDICTED: Mus musculus similar to PX domain-containing protein kinase-like protein (Modulator of Na,K-ATPase) (MONaKA) (LOC100044756), mRNA.					
Mus musculus	RefSeq	ILMN_214300	ILMN_312362	LOC100044756	XM_001472989.1	XM_001472989.1		100044756	149265193	XM_001472989.1	LOC100044756	XP_001473039.1	ILMN_3163031	000770053	A	1560	CCAGCCTGTGAATGGTGTGAACCGTGGGGCCTTGCTCAGTTCCATCCAGA					PREDICTED: Mus musculus similar to PX domain-containing protein kinase-like protein (Modulator of Na,K-ATPase) (MONaKA) (LOC100044756), mRNA.					
Mus musculus	RefSeq	ILMN_189682	ILMN_249185	RBBP9	NM_015754.2	NM_015754.2		26450	86439976	NM_015754.2	Rbbp9	NP_056569.2	ILMN_1214213	003370270	S	1955	TAGAGTTCAGCCTCTTGTAGAGAGTATTCAAGCAACACTGCCGAGTCTTC	2	-	144368156-144368205	2qG1	Mus musculus retinoblastoma binding protein 9 (Rbbp9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Bog	Bog
Mus musculus	RefSeq	ILMN_249185	ILMN_249185	RBBP9	NM_015754.2	NM_015754.2		26450	86439976	NM_015754.2	Rbbp9	NP_056569.2	ILMN_2890496	002230424	S	1952	CTATAGAGTTCAGCCTCTTGTAGAGAGTATTCAAGCAACACTGCCGAGTC	2	-	144368159-144368208	2qG1	Mus musculus retinoblastoma binding protein 9 (Rbbp9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Bog	Bog
Mus musculus	RefSeq	ILMN_197350	ILMN_197350	LOC228898	XM_130719.2	XM_130719.2			38075268	XM_130719.2	LOC228898		ILMN_2527821	002900598	S	506	CCTTGAGCAGGTCAGCAAGGCCAGGTCGGTTGAAGAGAGTAAGTAGCCAC										
Mus musculus	RefSeq	ILMN_201232	ILMN_230334	GM1123	NM_001080776.1	NM_001080776.1		382097	124249110	NM_001080776.1	Gm1123	NP_001074245.1	ILMN_1239800	005720343	S	549	CTGTCCATCTGCCCTGCATGTTCACCTTTATCTCCAAGGACCAAGGACCG	9	-	98916439-98916488	9qE3.3	Mus musculus gene model 1123, (NCBI) (Gm1123), mRNA.				AV052824; MGC141178; CLSP	AV052824; MGC141178; CLSP
Mus musculus	RefSeq	ILMN_230334	ILMN_230334	GM1123	NM_001080776.1	NM_001080776.1		382097	124249110	NM_001080776.1	Gm1123	NP_001074245.1	ILMN_2865047	004610382	S	144	AGCAGACAATTCAGGAAGTCCAAGGGGAAACTGTCCATCTGCCCTGCATG	9	-	98923748-98923797	9qE3.3	Mus musculus gene model 1123, (NCBI) (Gm1123), mRNA.				AV052824; MGC141178; CLSP	AV052824; MGC141178; CLSP
Mus musculus	RefSeq	ILMN_192698	ILMN_192698	YWHAB	NM_018753.3	NM_018753.3		54401	31560854	NM_018753.3	Ywhab	NP_061223.2	ILMN_2935362	004210274	S	2658	GAAACCCCAGTTACTGATGTGCTAGATCCGTGTATGTCTAAACATTCTAG	2	+	163709911-163709960	2qH3	Mus musculus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide (Ywhab), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]	14-3-3 beta; 1300003C17Rik	14-3-3 beta; 1300003C17Rik
Mus musculus	Riken	ILMN_207215	ILMN_207215	PTPRK	ri|C530031L02|PX00669K24|AK083006|3961					AK083006	Ptprk		ILMN_2585911	003400445	S	3277	ACACTTGGTTGACATTCAGGAGTGGGTCCCCAGGGCAAGCTGACTAGCTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190071	ILMN_249862	CYBB	NM_007807.3	NM_007807.3		13058	144227198	NM_007807.3	Cybb	NP_031833.2	ILMN_2716935	003400458	S	2989	GAGTAAAATTACATCCGATATTTTATGGGCATCCAGAAATGCAAGACAGA	X	-	9014034-9014083	XqA1.1	Mus musculus cytochrome b-245, beta polypeptide (Cybb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	C88302; Cyd; Cgd; gp91<phox>; gp91phox; Nox2	C88302; Cyd; Cgd; gp91<phox>; gp91phox; Nox2
Mus musculus	MEEBO	ILMN_223790	ILMN_223790	OLFR1052	scl4926.1.1_78				22128916	NM_147010	Olfr1052		ILMN_2769198	001780484	S	623	TTGGTACTCTCTTGATTGTGTTCATATCCTATTTACTCATTGCTCTGGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_243454	ILMN_243454	PTF1A	NM_018809.1	NM_018809.1		19213	9055317	NM_018809.1	Ptf1a	NP_061279.1	ILMN_2917074	007100386	S	1008	CCCTCCTCTTGCAGGGCACTCTCTTTCCTGGACTGATGAAAAACAGCTCA	2	+	19368628-19368677	2qA3	Mus musculus pancreas specific transcription factor, 1a (Ptf1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons [goid 48699] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IDA]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IDA]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form [goid 60042] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PTF1p48; PTF1-p48	PTF1p48; PTF1-p48
Mus musculus	Riken	ILMN_205445	ILMN_205445	RDH5	ri|7530429G17|PX00312L11|AK033063|1311					AK033063	Rdh5		ILMN_1253251	007040632	S	960	TGTCACGCTGACTGGCCTGGAACTCACAGACACCATGCTGGGTTACACTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216332	ILMN_331422	DUOX1	NM_001099297.1	NM_001099297.1		99439	150010670	NM_001099297.1	Duox1	NP_001092767.1	ILMN_2669853	000020458	S	4905	AGAACTATAGGTTCAGAAGTAGGGGAGCTTTTGGGTTGAGACAAAGTGAG				2qE5	Mus musculus dual oxidase 1 (Duox1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	9930101G15Rik; P138-TOX; THOX1; Duox2; NOXEF2; LNOX2; THOX2; LNOX1; AW987690; NOXEF1	9930101G15Rik; P138-TOX; THOX1; Duox2; NOXEF2; LNOX2; THOX2; LNOX1; AW987690; NOXEF1
Mus musculus	MEEBO	ILMN_193137	ILMN_193137	SCL0002791.1_134	scl0002791.1_134						scl0002791.1_134		ILMN_2494421	004590114	S	11	GAGGTCCCATCACTTAGCAGTTTCCCTGAGTCTATATCTGAAGAGCTGGA										
Mus musculus	RefSeq	ILMN_215356	ILMN_215356	OPTC	NM_054076.1	NM_054076.1		269120	16905106	NM_054076.1	Optc	NP_473417.1	ILMN_1253158	004230564	S	1303	CCCAGATGGTGCTAAGAGGCTCACTGAGGGAGCACTATTTACCTGCACCC	1	-	135794308-135794357	1qE4	Mus musculus opticin (Optc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC117622	MGC117622
Mus musculus	RefSeq	ILMN_197089	ILMN_310293	LOC100045274	XM_001472447.1	XM_001472447.1		100045274	149274405	XM_001472447.1	LOC100045274	XP_001472497.1	ILMN_2526874	001260356	S	327	CTAAGAGACTATCAAGATAACAAAGCTGATGTAATCTTAAAGTACAATCC					PREDICTED: Mus musculus hypothetical protein LOC100045274 (LOC100045274), mRNA.					
Mus musculus	RefSeq	ILMN_200740	ILMN_260529	LOC637127	XR_002775.1	XR_002775.1		637127	94381619	XR_002775.1	LOC637127		ILMN_1235346	003420187	S	44	CCGAGGGCTTGTGCAAGGTCAACAAGAACTCAGAGGAGTCCGAGAACATC					PREDICTED: Mus musculus similar to DYnein Light chain (Tctex type] family member (dylt-2) (LOC637127), mRNA.					
Mus musculus	MEEBO	ILMN_194910	ILMN_194910	2810453I06RIK	scl27011.2_30				21313057	NM_026050	2810453I06Rik		ILMN_2510771	004860332	S	15	CCTGCAAGAGTGGTGAAGGCTCATGGTATTTATAAGCAATAAACGGGCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_217483	ILMN_224688	CATSPER3	NM_029772.3	NM_029772.3		76856	146149076	NM_029772.3	Catsper3	NP_084048.1	ILMN_2773872	000650296	S	1201	AGAGCTCGTCCAGCCTCTCGGGACTAAGTTAGAGGTAGCCGTAGCTGGGA				13qB1	Mus musculus cation channel, sperm associated 3 (Catsper3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; Cell motility due to movement of cilia or flagella [goid 1539] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5227] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	MGC107210; CACRC; 4921522D01Rik	MGC107210; CACRC; 4921522D01Rik
Mus musculus	RefSeq	ILMN_238873	ILMN_238873	SEPT5	NM_213614.1	NM_213614.1		18951	47132508	NM_213614.1	Sept5	NP_998779.1	ILMN_2828265	001850041	S	1413	TCTCGGCGTCCACCCTTCCCGGTCATTTGTATCTGCTTCCGAGTGCTCTG	16	-	19259404-19259453	16qA3	Mus musculus septin 5 (Sept5), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pnutl1; Cdcrel-1; Cdcrel1	Pnutl1; Cdcrel-1; Cdcrel1
Mus musculus	RefSeq	ILMN_198689	ILMN_229472	LOC670450	XR_002975.1	XR_002975.1		670450	94409490	XR_002975.1	LOC670450		ILMN_1222372	006560050	S	422	TATCAAGATGGGCAACCACCTCAACAACCTCCATAGGCTGGCAAGGCCAC					PREDICTED: Mus musculus similar to Ferritin light chain 1 (Ferritin L subunit 1) (LOC670450), mRNA.					
Mus musculus	RefSeq	ILMN_187892	ILMN_187892	V1RK1	NM_134227.1	NM_134227.1		171261	21717770	NM_134227.1	V1rk1	NP_598988.1	ILMN_1231428	003440278	S	711	TTCACTTTACCAACCCAAGAGCAACCCAGTATTGGATCTGATTGGTGGAG	7	-	13716947-13716996	7qA1	Mus musculus vomeronasal 1 receptor, K1 (V1rk1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_209229	ILMN_209229	SDK2	NM_172800.2	NM_172800.2		237979	40254253	NM_172800.2	Sdk2	NP_766388.2	ILMN_2885188	001340131	S	6485	ACTCCAACGCCCCAAAACCCCCCGAATCCCCAGAGTCAGCAGAGCACCCT	11	-	113642173-113642222	11qE2	Mus musculus sidekick homolog 2 (chicken) (Sdk2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1514; Sdk-2; 5330435L01Rik; 4632412F08Rik	mKIAA1514; Sdk-2; 5330435L01Rik; 4632412F08Rik
Mus musculus	RefSeq	ILMN_209229	ILMN_209229	SDK2	NM_172800.2	NM_172800.2		237979	40254253	NM_172800.2	Sdk2	NP_766388.2	ILMN_2593815	002760717	S	2490	CCACAAATTCTACAACCATCCGATTCACCTGGAATGCCCCAAGCCCGCAG	11	-	113712239-113712288	11qE2	Mus musculus sidekick homolog 2 (chicken) (Sdk2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1514; Sdk-2; 5330435L01Rik; 4632412F08Rik	mKIAA1514; Sdk-2; 5330435L01Rik; 4632412F08Rik
Mus musculus	RefSeq	ILMN_209229	ILMN_209229	SDK2	NM_172800.2	NM_172800.2		237979	40254253	NM_172800.2	Sdk2	NP_766388.2	ILMN_2622241	003780762	S	6247	CCAGGGAAGTGACAGCGAGTACGAAGTGGACACGAACACCCAGAAAGCCC	11	-	113642411-113642457:113652689-113652691	11qE2	Mus musculus sidekick homolog 2 (chicken) (Sdk2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1514; Sdk-2; 5330435L01Rik; 4632412F08Rik	mKIAA1514; Sdk-2; 5330435L01Rik; 4632412F08Rik
Mus musculus	RefSeq	ILMN_215293	ILMN_215293	SLC30A7	NM_023214.5	NM_023214.5		66500	146134908	NM_023214.5	Slc30a7	NP_075703.1	ILMN_1233693	007330253	S	1398	TACAACTCAGAAGCACCAAGGACGCAGGTAGAGTCAGCCGCGTGTTCGAG				3qG1	Mus musculus solute carrier family 30 (zinc transporter), member 7 (Slc30a7), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IC ]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IDA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	ZnT-7; ZnT7; Zntl2; 1810059J10Rik	ZnT-7; ZnT7; Zntl2; 1810059J10Rik
Mus musculus	RefSeq	ILMN_222667	ILMN_222667	1700025K23RIK	NM_183254.1	NM_183254.1		66337	34304029	NM_183254.1	1700025K23Rik	NP_899077.1	ILMN_1214517	005340161	S	622	GCATCATTAAGTCTTCTGTCGAGGGTTGACTAGGTCAAGGGTAATGGGCC	10	-	38838672-38838721	10qB1	Mus musculus RIKEN cDNA 1700025K23 gene (1700025K23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_241358	ILMN_241358	AI846148	NM_001033139.2	NM_001033139.2		68229	141803489	NM_001033139.2	AI846148	NP_001028311.1	ILMN_3162431	006650632	S	1424	GGCATTGGGCCTGTGGAGAACACCTTCCCTAATCCTTCGCTGACCTACCC	19	-	7432463-7432512	19qA	Mus musculus expressed sequence AI846148 (AI846148), mRNA. XM_896219 XM_896224 XM_912777 XM_922495 XM_922500 XM_922504 XM_922508 XM_922513 XM_922518				1700105P06Rik	1700105P06Rik
Mus musculus	RefSeq	ILMN_209401	ILMN_209401	CCDC65	NM_153518.1	NM_153518.1		105833	23943817	NM_153518.1	Ccdc65	NP_705738.1	ILMN_1253268	007510397	S	1606	CTACAACGTCATCGAAGCCGCCCACATTGCCTCCCATATCCTGTGACCGG	15	+	98553493-98553538:98553539-98553542	15qF1	Mus musculus coiled-coil domain containing 65 (Ccdc65), mRNA.				AI428139; 4933417K04Rik; AU020178; NYD-SP28	AI428139; 4933417K04Rik; AU020178; NYD-SP28
Mus musculus	RefSeq	ILMN_209401	ILMN_209401	CCDC65	NM_153518.1	NM_153518.1		105833	23943817	NM_153518.1	Ccdc65	NP_705738.1	ILMN_2595469	001820672	S	1602	TGTCTACAACGTCATCGAAGCCGCCCACATTGCCTCCCATATCCTGTGAC	15	+	98553489-98553538	15qF1	Mus musculus coiled-coil domain containing 65 (Ccdc65), mRNA.				AI428139; 4933417K04Rik; AU020178; NYD-SP28	AI428139; 4933417K04Rik; AU020178; NYD-SP28
Mus musculus	Riken	ILMN_203790	ILMN_203790	A230061B10RIK	ri|A230061B10|PX00128P23|AK038766|359					AK038766	A230061B10Rik		ILMN_1220078	007510519	S	201	GCTGGAGACCTACAGGAACCTCAGTGCTTTAGGTACATTTGTGAATTCCC										
Mus musculus	RefSeq	ILMN_201301	ILMN_201301	LOC385046	XM_358013.1	XM_358013.1			38090645	XM_358013.1	LOC385046		ILMN_2541806	002680343	S	245	GCCGTCACTACTGGGAAGTGGTCACCAGCGGAAGCACATGGAAGGACAGA										
Mus musculus	RefSeq	ILMN_214490	ILMN_214490	OLFR1444	NM_146702.1	NM_146702.1		258697	22129432	NM_146702.1	Olfr1444	NP_666913.1	ILMN_2648542	006220209	S	908	GGAAAATACTCAACAGATTTTACCCTGCGTCTTTTAGTGTGAGTAGGAAG	19	+	12937174-12937223	19qA	Mus musculus olfactory receptor 1444 (Olfr1444), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-4	MOR202-4
Mus musculus	MEEBO	ILMN_224062	ILMN_224062	CAR12	scl36787.11_464				31560837	NM_178396	Car12		ILMN_1251713	002320541	S	3532	CTGTCCCTCAGCCCATAGGCCACTGTGATAATTGTCTGCTCAGCATTTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196578	ILMN_196578	DUB2	NM_010089.3	NM_010089.3		13532	119964687	NM_010089.3	Dub2	NP_034219.3	ILMN_2613219	007550402	S	1379	CAGGAACAGAACCACCAGAAAGCTGGGCAGAGCCTCAGGAACACGGAAGG	7	+	110567370-110567419	7qE3	Mus musculus deubiquitinating enzyme 2 (Dub2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Dub2b	Dub2b
Mus musculus	RefSeq	ILMN_198734	ILMN_198734	LOC269980	XM_195683.2	XM_195683.2			38087161	XM_195683.2	LOC269980		ILMN_2532732	006350735	S	729	GGCTCAGAGCGTGAAGCAAGCCCTGCAGGATACCAAGAAGGCATAAGAGC										
Mus musculus	RefSeq	ILMN_212246	ILMN_212246	OLFR365	NM_146662.1	NM_146662.1		258656	33239285	NM_146662.1	Olfr365	NP_666873.1	ILMN_2624376	001510082	S	879	CCTGAGGAATAAAGATATGAAGAGAGGTTTGAGGAAGTTAATGGGTAAAG	2	+	37057641-37057690	2qB	Mus musculus olfactory receptor 365 (Olfr365), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR138-1	MOR138-1
Mus musculus	RefSeq	ILMN_189126	ILMN_189126	ZFP592	NM_178707.3	NM_178707.3		233410	141802739	NM_178707.3	Zfp592	NP_848822.1	ILMN_2458587	003850520	S	4704	GGGTGTGTGGCACACAGATATTGGGGTATTTGTATTTTTGTTCCTGTGCC	7	+	88187460-88187509	7qD3	Mus musculus zinc finger protein 592 (Zfp592), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA0211; 8430405N24; A730014M16Rik	mKIAA0211; 8430405N24; A730014M16Rik
Mus musculus	RefSeq	ILMN_220142	ILMN_220142	ADAM15	NM_009614.2	NM_009614.2		11490	109148518	NM_009614.2	Adam15	NP_033744.1	ILMN_3139103	004760730	A	2548	GCAGCATCTTCGCTCTACCTCTGACCTCTGGAGATTTGGCTGCCTCCTTC	3	-	89143806-89143832:89143833-89143855	3qF1	Mus musculus a disintegrin and metallopeptidase domain 15 (metargidin) (Adam15), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	metargidin; MDC15	metargidin; MDC15
Mus musculus	RefSeq	ILMN_217337	ILMN_217337	PNP1	NM_013632.3	NM_013632.3		18950	142368657	NM_013632.3	Pnp1	NP_038660.1	ILMN_1256020	007160609	S	1518	CACGTTCTCCATTTACTCCATTGCTTGAGTATCTGCATCTCACAGATCTC	14	+	51571886-51571935	14qC1	Mus musculus purine-nucleoside phosphorylase 1 (Pnp1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 6148] [evidence IMP]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence ISO]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; The chemical reactions and pathways resulting in the formation of urate, the anion of uric acid, 2,6,8-trioxypurine [goid 34418] [evidence IMP]; The chemical reactions and pathways resulting in the formation of urate, the anion of uric acid, 2,6,8-trioxypurine [goid 34418] [evidence ISO]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IMP]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IMP]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IC ]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IMP]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving dGTP, guanosine triphosphate [goid 46070] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IMP]; The chemical reactions and pathways involving dGTP, guanosine triphosphate [goid 46070] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyguanosine, a nucleoside consisting of the base guanine and the sugar deoxyribose [goid 6161] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyinosine, hypoxanthine deoxyriboside [goid 6149] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of guanine, guanine riboside, a nucleoside with a wide species distribution [goid 46115] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 6148] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 6148] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA repair [goid 45739] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor) [goid 16763] [evidence IEA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence ISO]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]	AL024301; Np-2; Np; Np-1; AU015798	AL024301; Np-2; Np; Np-1; AU015798
Mus musculus	RefSeq	ILMN_217337	ILMN_217337	PNP1	NM_013632.3	NM_013632.3		18950	142368657	NM_013632.3	Pnp1	NP_038660.1	ILMN_1215638	001170598	S	2502	AAGGGGGAAATGTGGGTGAGAGGAAAGTGGAGTACTCTCAGCTAACACAC	14	+	51572870-51572919	14qC1	Mus musculus purine-nucleoside phosphorylase 1 (Pnp1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 6148] [evidence IMP]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence ISO]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; The chemical reactions and pathways resulting in the formation of urate, the anion of uric acid, 2,6,8-trioxypurine [goid 34418] [evidence IMP]; The chemical reactions and pathways resulting in the formation of urate, the anion of uric acid, 2,6,8-trioxypurine [goid 34418] [evidence ISO]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IMP]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IMP]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IC ]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IMP]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving dGTP, guanosine triphosphate [goid 46070] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IMP]; The chemical reactions and pathways involving dGTP, guanosine triphosphate [goid 46070] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyguanosine, a nucleoside consisting of the base guanine and the sugar deoxyribose [goid 6161] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyinosine, hypoxanthine deoxyriboside [goid 6149] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of guanine, guanine riboside, a nucleoside with a wide species distribution [goid 46115] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 6148] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 6148] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA repair [goid 45739] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor) [goid 16763] [evidence IEA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence ISO]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]	AL024301; Np-2; Np; Np-1; AU015798	AL024301; Np-2; Np; Np-1; AU015798
Mus musculus	RefSeq	ILMN_217337	ILMN_217337	PNP1	NM_013632.3	NM_013632.3		18950	142368657	NM_013632.3	Pnp1	NP_038660.1	ILMN_1216954	003460431	S	1535	CCATTGCTTGAGTATCTGCATCTCACAGATCTCACTTCTCCAGCACTGCC	14	+	51571903-51571952	14qC1	Mus musculus purine-nucleoside phosphorylase 1 (Pnp1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 6148] [evidence IMP]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence ISO]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; The chemical reactions and pathways resulting in the formation of urate, the anion of uric acid, 2,6,8-trioxypurine [goid 34418] [evidence IMP]; The chemical reactions and pathways resulting in the formation of urate, the anion of uric acid, 2,6,8-trioxypurine [goid 34418] [evidence ISO]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IMP]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IMP]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IC ]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IMP]; The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside) [goid 42278] [evidence IDA]; The chemical reactions and pathways involving dGTP, guanosine triphosphate [goid 46070] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IMP]; The chemical reactions and pathways involving dGTP, guanosine triphosphate [goid 46070] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyguanosine, a nucleoside consisting of the base guanine and the sugar deoxyribose [goid 6161] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of deoxyinosine, hypoxanthine deoxyriboside [goid 6149] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of guanine, guanine riboside, a nucleoside with a wide species distribution [goid 46115] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 6148] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs [goid 6148] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA repair [goid 45739] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor) [goid 16763] [evidence IEA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence ISO]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IDA]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]; Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate [goid 4731] [evidence IMP]	AL024301; Np-2; Np; Np-1; AU015798	AL024301; Np-2; Np; Np-1; AU015798
Mus musculus	Riken	ILMN_203934	ILMN_203934	SATB1	ri|A130086L12|PX00125B19|AK038206|4803					AK038206	Satb1		ILMN_2561103	004120661	S	4669	ATAGCTTTATAGGCCGCATGCCTGCCTACCCTTCAATCACTGTCAAAGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell [goid 43367] [evidence IMP]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell [goid 43374] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; An automatic response to a stimulus beginning with a nerve impulse from a receptor and ending with the action of an effector such as a gland or a muscle. Signaling never reaches a level of consciousness [goid 60004] [evidence IMP]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_208624	ILMN_208624	EIF5A	scl40009.3.137_12						Eif5a		ILMN_1251631	002370446	S	105	AGCACAGTAGCGGGTTCGGAGGCAGCAGTTGGGCTCGCGGCGAGCGGACC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197073	ILMN_197073	LOC214302	XM_138257.2	XM_138257.2			38073798	XM_138257.2	LOC214302		ILMN_2526810	007560669	S	416	AGGCCCTGCTGCGCGAGAACCTGGAGCTGAAAGAGCTGGCCAGCCTGAGC										
Mus musculus	Riken	ILMN_205379	ILMN_205379	D130032I18RIK	ri|D130032I18|PX00184C19|AK051308|2342					AK051308	D130032I18Rik		ILMN_2572109	003060441	S	2151	GAGTCCAAAGCTCTACACCCTCAGCCATCAGGGATGCAACTCAGGTTACT										
Mus musculus	Riken	ILMN_201719	ILMN_201719	EIF2AK3	ri|2410004L11|ZX00041M24|AK010397|928					AK010397	Eif2ak3		ILMN_1221022	000270451	S	632	GATCCGAAACCAACCTACAGCTGTGCCTCTGAGCGTGTGTTGGGATGACC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IGI]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process of apoptosis in cells infected with a virus [goid 6926] [evidence IMP]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of protein binding [goid 32092] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IMP]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons [goid 31642] [evidence IMP]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199245	ILMN_199245	LOC331083	XM_285626.2	XM_285626.2			38093408	XM_285626.2	LOC331083		ILMN_1253041	000070154	S	659	CAGTGAAGCAAGTGGAGCACAGTGCCATCACAGTGGAGCACAATGTCACC										
Mus musculus	RefSeq	ILMN_196435	ILMN_245207	NAT12	XM_905858.2	XM_905858.2		70646	94397390	XM_905858.2	Nat12	XP_910951.1	ILMN_1245640	003460347	S	763	CAGCTGTGTTTCTTGGCCATGGTAGGGGAGGAGTGTGTAGGTGCCATCGT				14qC1	PREDICTED: Mus musculus N-acetyltransferase 12, transcript variant 3 (Nat12), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210415	ILMN_210415	COX6A1	scl012861.2_54	NM_007748.2			31982449	NM_007748.2	Cox6a1		ILMN_2605400	001170768	S	191	AAGTCGCGGCACGAAGAGCACGAGAGACCCCCGTTCGTTGCCTACCCTCA						The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210136	ILMN_210136	GMPR	NM_025508.3	NM_025508.3		66355	146134879	NM_025508.3	Gmpr	NP_079784.1	ILMN_2602581	000670626	S	1169	CAGCAGGAGAGCCACGTTCATCCGGGTGACCCAACAGCACAACACGGTGT				13qA5	Mus musculus guanosine monophosphate reductase (Gmpr), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NH3 + NADP+ = guanosine 5'-phosphate + NADPH + H+ [goid 3920] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2310004P21Rik; AV028449	2310004P21Rik; AV028449
Mus musculus	RefSeq	ILMN_185680	ILMN_185680	UTS2	NM_011910.1	NM_011910.1		24111	6755930	NM_011910.1	Uts2	NP_036040.1	ILMN_1252528	001470750	S	30	CCGCATCATGGACAGGGTGCCCTTCTGCTGCCTGCTCTTCATAGGACTTC	4	+	150371235-150371241:150371242-150371284	4qE2	Mus musculus urotensin 2 (Uts2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC130254; Ucn2; MGC130253; prepro-UII; UII	MGC130254; Ucn2; MGC130253; prepro-UII; UII
Mus musculus	RefSeq	ILMN_185680	ILMN_185680	UTS2	NM_011910.1	NM_011910.1		24111	6755930	NM_011910.1	Uts2	NP_036040.1	ILMN_2921248	007380010	S	411	AGACACAAGCGCCCGTTGGTCTCTCAGAACCATTACATTCAGGAAACGGG	4	+	150375792-150375841	4qE2	Mus musculus urotensin 2 (Uts2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC130254; Ucn2; MGC130253; prepro-UII; UII	MGC130254; Ucn2; MGC130253; prepro-UII; UII
Mus musculus	RefSeq	ILMN_185680	ILMN_185680	UTS2	NM_011910.1	NM_011910.1		24111	6755930	NM_011910.1	Uts2	NP_036040.1	ILMN_1225001	001470020	S	465	GCAGATGCTTGAAGCAAAATCACGCTAACGACGCCTTGTTCTTCATTATG	4	+	150375846-150375895	4qE2	Mus musculus urotensin 2 (Uts2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC130254; Ucn2; MGC130253; prepro-UII; UII	MGC130254; Ucn2; MGC130253; prepro-UII; UII
Mus musculus	MEEBO	ILMN_223719	ILMN_223719	PSMA5	scl0026442.1_315	NM_011967.1			7106386	NM_011967.1	Psma5		ILMN_2768119	002480671	S	876	ATATCCAGTATATGTGTGTGTGTTTTTTTATGAAGTCTGTACATAACAGC						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219777	ILMN_219777	OLFR1351	NM_147040.1	NM_147040.1		259042	33239283	NM_147040.1	Olfr1351	NP_667251.1	ILMN_1247058	001070538	S	880	AGGAATAATGACATGAAAAAGGCTCTGAAAATAGTTTTAGGGAGGGTAAC	10	+	78480948-78480997	10qC1	Mus musculus olfactory receptor 1351 (Olfr1351), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123826; MOR139-4	MGC123826; MOR139-4
Mus musculus	RefSeq	ILMN_187849	ILMN_187849	V1RC33	NM_134436.2	NM_134436.2		171206	148224751	NM_134436.2	V1rc33	NP_602318.2	ILMN_1257730	002060020	S	741	CTCAACCACATCAGTTCTGTTGTGGATTTATGATCCAGTCAGCCTGATGG				6qB3	Mus musculus vomeronasal 1 receptor, C33 (V1rc33), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_219517	ILMN_219517	SYNCRIP	NM_019796.4	NM_019796.4		56403	114145481	NM_019796.4	Syncrip	NP_062770.1	ILMN_2709935	005890608	S	2062	GGGATTACACCAGAAGCTTGCAGTGGAGTAATGGTAAGGAAAATCAAGCA	9	-	88349023-88349072	9qE3.1	Mus musculus synaptotagmin binding, cytoplasmic RNA interacting protein (Syncrip), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence IDA]	Nsap1; pp68; Nsap1l; 4632417O19Rik; GRY-RBP; 2610109K23Rik	Nsap1; pp68; Nsap1l; 4632417O19Rik; GRY-RBP; 2610109K23Rik
Mus musculus	RefSeq	ILMN_189844	ILMN_219517	SYNCRIP	NM_019796.4	NM_019796.4		56403	114145481	NM_019796.4	Syncrip	NP_062770.1	ILMN_1258420	000290424	S	6302	TTTCGTTCCTTTTGTCTCACTGAAAGCTGTCTGCAGGCTCTTTGATTTGG	9	-	88344783-88344832	9qE3.1	Mus musculus synaptotagmin binding, cytoplasmic RNA interacting protein (Syncrip), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence IDA]	Nsap1; pp68; Nsap1l; 4632417O19Rik; GRY-RBP; 2610109K23Rik	Nsap1; pp68; Nsap1l; 4632417O19Rik; GRY-RBP; 2610109K23Rik
Mus musculus	RefSeq	ILMN_223473	ILMN_223473	PDE5A	NM_153422.1	NM_153422.1		242202	23510316	NM_153422.1	Pde5a	NP_700471.1	ILMN_2764541	003890255	S	3154	CGTGGTACCTAATTGCTCTGCTCTTTCTAGGATGGGGAGAACTTGCAGTA	3	+	122558747-122558796	3qG1	Mus musculus phosphodiesterase 5A, cGMP-specific (Pde5a), mRNA.		The chemical reactions and pathways resulting in the breakdown of cyclic GMP, guanosine 3',5'-phosphate [goid 46069] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IDA]; Catalysis of the reaction: a nucleoside cyclic phosphate + H2O = a nucleoside phosphate [goid 4112] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]	CGB-PDE; Pde5; CN5N; PDE5A1	CGB-PDE; Pde5; CN5N; PDE5A1
Mus musculus	Riken	ILMN_205120	ILMN_205120	E130314P11RIK	ri|E130314P11|PX00208J12|AK053853|2676					AK053853	E130314P11Rik		ILMN_1259721	000630112	S	2422	CCAGCAGAATGTCATCCTACGGAGTTAGGTCAGGCTCAGCATAGTGTGGC										
Mus musculus	RefSeq	ILMN_247315	ILMN_247315	OLFR988	NM_001011534.1	NM_001011534.1		258166	58372139	NM_001011534.1	Olfr988	NP_001011534.1	ILMN_3162461	007100382	S	326	CCATTGACTCCTTCATCTTAGCTGCTATGGCTGTGGACCGCTATGTGGCC	2	-	85193706-85193755	2qD	Mus musculus olfactory receptor 988 (Olfr988), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR203-5P	MOR203-5P
Mus musculus	RefSeq	ILMN_209856	ILMN_209856	PBX2	NM_017463.1	NM_017463.1		18515	8567383	NM_017463.1	Pbx2	NP_059491.1	ILMN_2916489	003060162	S	2685	CTGTCACCATGGGGAACCCCTCCCATCAAAGGCCCAGGCTGGACTGAGGG	17	+	34732809-34732858	17qB1	Mus musculus pre B-cell leukemia transcription factor 2 (Pbx2), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	G17; AU043397	G17; AU043397
Mus musculus	RefSeq	ILMN_217121	ILMN_217121	EFNA1	NM_010107.3	NM_010107.3		13636	142374591	NM_010107.3	Efna1	NP_034237.2	ILMN_1244460	002490053	S	1333	GTCTGTGGAGTTTAGCTTAACGGGCAGGGCCCACATGTACAGTGTCTGTA	3	-	89075748-89075797	3qF1	Mus musculus ephrin A1 (Efna1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The series of molecular signals generated as a consequence of an ephrin receptor binding to an ephrin [goid 48013] [evidence IDA]; Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence IDA]		Epl1; Lerk1; EFL-1; Eplg1; B61; LERK-1; AI325262	Epl1; Lerk1; EFL-1; Eplg1; B61; LERK-1; AI325262
Mus musculus	RefSeq	ILMN_194897	ILMN_250002	4930487D11RIK	XM_979477.1	XM_979477.1		78172	94374711	XM_979477.1	4930487D11Rik	XP_984571.1	ILMN_2510641	006980670	S	213	AAGTCTCTGCAGCGGCCACCAGCATGTGAACAAAAGTCTTGGGGGCTGAG	5	+	38740308-38740336:38740337-38740357	5qB3	PREDICTED: Mus musculus RIKEN cDNA 4930487D11 gene (4930487D11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217048	ILMN_217048	GPR3	NM_008154.3	NM_008154.3		14748	148226917	NM_008154.3	Gpr3	NP_032180.1	ILMN_2678530	006200403	S	1659	GACCCCATTTCTGACCTCAGTTTCCGAAGGGGGCGGGATGGAAAAAGAGA				4qD2.3	Mus musculus G-protein coupled receptor 3 (Gpr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of meiosis, the process by which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes [goid 40020] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpcr21; Gpcr20; Gpcr3	Gpcr21; Gpcr20; Gpcr3
Mus musculus	RefSeq	ILMN_211366	ILMN_211366	ACCN3	NM_183000.2	NM_183000.2		171209	147905661	NM_183000.2	Accn3	NP_892045.2	ILMN_2699096	002650477	S	1665	GGGGTACTTCTGGAACAGAAGGAGCTCTCAAAGGCGCTCTGGCAACACTC				5qA3	Mus musculus amiloride-sensitive cation channel 3 (Accn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IMP]; The series of events in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50907] [evidence IMP]; The series of events involved in the perception of pain in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50968] [evidence IMP]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IMP]; The series of events in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50974] [evidence IMP]; The series of events in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50961] [evidence IMP]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence TAS]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP];  [goid 15280] [evidence ISO]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	ASIC3; AW742291; TNAC1; SLNAC1; DRASIC	ASIC3; AW742291; TNAC1; SLNAC1; DRASIC
Mus musculus	RefSeq	ILMN_211366	ILMN_211366	ACCN3	NM_183000.2	NM_183000.2		171209	147905661	NM_183000.2	Accn3	NP_892045.2	ILMN_2615124	004640438	S	1408	ATTCCCAGCCGCGCTTCAGCTCGCTACCTGGCCCGGAAATACAACCGTAG				5qA3	Mus musculus amiloride-sensitive cation channel 3 (Accn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IMP]; The series of events in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50907] [evidence IMP]; The series of events involved in the perception of pain in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50968] [evidence IMP]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IMP]; The series of events in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50974] [evidence IMP]; The series of events in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50961] [evidence IMP]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence TAS]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP];  [goid 15280] [evidence ISO]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	ASIC3; AW742291; TNAC1; SLNAC1; DRASIC	ASIC3; AW742291; TNAC1; SLNAC1; DRASIC
Mus musculus	RefSeq	ILMN_192560	ILMN_192560	VPREB1	NM_016982.1	NM_016982.1		22362	8850237	NM_016982.1	Vpreb1	NP_058678.1	ILMN_2846485	003870274	S	614	GCTCGGCTAGTCTGGTATGGGAAGGAGGGGTAGAACGTGAGGTTTTGCAG	16	-	16868593-16868642	16qA3	Mus musculus pre-B lymphocyte gene 1 (Vpreb1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IPI]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IPI]; Any process that modulates the size of a cell [goid 8361] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IGI]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IMP]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence IGI]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IGI]; The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 2377] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IPI]	CD179a; Vpreb-1; MGC151428	CD179a; Vpreb-1; MGC151428
Mus musculus	RefSeq	ILMN_229370	ILMN_229370	ABI1	NM_001077193.1	NM_001077193.1		11308	116089350	NM_001077193.1	Abi1	NP_001070661.1	ILMN_3094886	006900196	A	876	ATAGTGGAAGTAGTGGAGGAAGCGGAAGCCGAGAGAACAGTGGGAGCAGC	2	-	22812592-22812638:22816227-22816229	2qA3	Mus musculus abl-interactor 1 (Abi1), transcript variant 5, mRNA.	The area of a motile cell closest to the direction of movement [goid 31252] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISA]	Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IPI]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [evidence IDA]	NAP1; MGC6064; E3B1; Ssh3bp1	NAP1; MGC6064; E3B1; Ssh3bp1
Mus musculus	MEEBO	ILMN_186094	ILMN_186094	GRID2	scl29956.4_609				6680090	NM_008167	Grid2		ILMN_2432568	000020747	S	2	GCACCCCAGACGCTGCAGTGACTTCAGCTATCAACAAACTGTTAACCATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186094	ILMN_186094	GRID2	scl29956.4_609				6680090	NM_008167	Grid2		ILMN_2631224	002630358	S	2954	TCCTTATCAGCCTACTCCCACTCTGGGGCTCAATCTGGGCAATGACCCCG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]		
Mus musculus	RefSeq	ILMN_250571	ILMN_250571	ESPN	NM_207687.2	NM_207687.2		56226	111494241	NM_207687.2	Espn	NP_997570.1	ILMN_3045869	004570519	I	754	CACACCAAAGTGCTCAGCTGGCTCCTGCTGCACGGGGCAGAGATCTCGCA	4	-	151512899-151512948	4qE2	Mus musculus espin (Espn), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence TAS]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence ISO]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Assembly of actin filament bundles in which the filaments are tightly packed (approximately 10-20 nm apart) and oriented with the same polarity [goid 30046] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; The assembly of a network of actin filaments; actin filaments on different axes and with differing orientations are crosslinked together to form a mesh of filaments [goid 51639] [evidence NAS]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	je	je
Mus musculus	Riken	ILMN_206996	ILMN_206996	6430573D20RIK	ri|6430573D20|PX00648F22|AK078287|1643					AK078287	6430573D20Rik		ILMN_1251358	000870026	S	1403	GGTTCATTCATTTGACCAACAGTTGTCCCTTGGTGTCCAGGGTAGATGCC										
Mus musculus	Riken	ILMN_204570	ILMN_204570	C130023D01RIK	ri|C130023D01|PX00168A08|AK047949|2536					AK047949	C130023D01Rik		ILMN_1220112	002650358	S	2091	GGAGCAGTCCCTCCAAAGGCTGAAGCAGGAGGAATACTTGAGACCAGGAG										
Mus musculus	MEEBO	ILMN_223860	ILMN_223860	CPN1	scl52455.6.1_68				13507643	NM_030703	Cpn1		ILMN_1253362	002970750	S	1641	CCCTGCTCTCAAACCCCTTGATCACGCTTCTCTTTTATTATCTGGGACAG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]		
Mus musculus	RefSeq	ILMN_236590	ILMN_236590	LY6F	NM_008530.1	NM_008530.1		17071	6678749	NM_008530.1	Ly6f	NP_032556.1	ILMN_2809589	002630577	S	694	ATGCCATTTTGTGTGGCTTGCTAATCTTGGCCCTGGAGGCTCGTGGCTAG	15	+	75099306-75099355	15qD3	Mus musculus lymphocyte antigen 6 complex, locus F (Ly6f), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]				
Mus musculus	Riken	ILMN_204448	ILMN_204448	ADSS2	ri|A730079J21|PX00152N09|AK043273|1734					AK043273	Adss2		ILMN_1251260	004890538	S	1664	TTGAAGTACATACTGAGGTAGAGCTCAGCCTTGAGCAGGGCGAGGGTGGG										
Mus musculus	RefSeq	ILMN_253831	ILMN_253831	ZFP397OS	NM_001080810.1	NM_001080810.1		328918	124249106	NM_001080810.1	Zfp397os	NP_001074279.1	ILMN_2921638	006110427	S	622	CTGCAGTCCTTGGAGAGCCATTGCAAGAGTGAACCCCAGGATCCCCAGAT	18	-	24129477-24129526	18qA2	Mus musculus zinc finger protein 397 opposite strand (Zfp397os), mRNA.				Gm754	Gm754
Mus musculus	RefSeq	ILMN_210403	ILMN_313150	CACNA1D	NM_001083616.1	NM_001083616.1		12289	134288874	NM_001083616.1	Cacna1d	NP_001077085.1	ILMN_2663841	002490484	S	6705	GATTGCCGATGCCTGTGACCTAACCATAGACGAGATGGAAAGTGCTGCCA	14	-	30855434-30855483	14qB	Mus musculus calcium channel, voltage-dependent, L type, alpha 1D subunit (Cacna1d), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IMP]	Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cacnl1a2; Cchl1a; D-LTCC; C79217; 8430418G19Rik; Cchl1a2	Cacnl1a2; Cchl1a; D-LTCC; C79217; 8430418G19Rik; Cchl1a2
Mus musculus	RefSeq	ILMN_184211	ILMN_313150	CACNA1D	NM_001083616.1	NM_001083616.1		12289	134288874	NM_001083616.1	Cacna1d	NP_001077085.1	ILMN_2416764	006650524	S	8973	GCAGCGTTGACAGCTGACTTTGGGAACGATCACCCATTCCAGAACACACG	14	-	30853166-30853215	14qB	Mus musculus calcium channel, voltage-dependent, L type, alpha 1D subunit (Cacna1d), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IMP]	Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cacnl1a2; Cchl1a; D-LTCC; C79217; 8430418G19Rik; Cchl1a2	Cacnl1a2; Cchl1a; D-LTCC; C79217; 8430418G19Rik; Cchl1a2
Mus musculus	RefSeq	ILMN_210403	ILMN_313150	CACNA1D	NM_001083616.1	NM_001083616.1		12289	134288874	NM_001083616.1	Cacna1d	NP_001077085.1	ILMN_2605284	000990154	S	6689	CAGCGACAAAACATGAGATTGCCGATGCCTGTGACCTAACCATAGACGAG	14	-	30855450-30855499	14qB	Mus musculus calcium channel, voltage-dependent, L type, alpha 1D subunit (Cacna1d), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IMP]	Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cacnl1a2; Cchl1a; D-LTCC; C79217; 8430418G19Rik; Cchl1a2	Cacnl1a2; Cchl1a; D-LTCC; C79217; 8430418G19Rik; Cchl1a2
Mus musculus	RefSeq	ILMN_209431	ILMN_209431	ADPRH	NM_007414.3	NM_007414.3		11544	87252722	NM_007414.3	Adprh	NP_031440.1	ILMN_2595704	002260564	S	1500	GATGGGGTCAGCTTTTCCCATTCAGAAACCTCATAACCTTGTATTCCAGT	16	-	38445512-38445561	16qB4	Mus musculus ADP-ribosylarginine hydrolase (Adprh), mRNA.		The process of removing one or more ADP-ribose residues from a protein [goid 51725] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IMP]	Catalysis of the reaction: N2-(ADP-D-ribosyl)-L-arginine + H2O = L-arginine + ADP-ribose [goid 3875] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]	Arh1	Arh1
Mus musculus	Riken	ILMN_207404	ILMN_207404	G630019A19RIK	ri|G630019A19|PL00012B16|AK090210|1873					AK090210	G630019A19Rik		ILMN_1252611	004760435	S	1663	CTTAGCCCCAGGCTGCAAGGGTAAAGTCCAGGCCGCAGGAGAGCAAAGGT										
Mus musculus	RefSeq	ILMN_194554	ILMN_260314	HS6ST2	NM_001077202.1	NM_001077202.1		50786	116284407	NM_001077202.1	Hs6st2	NP_001070670.1	ILMN_1244144	002940154	S	1001	CAAACTTCAACTCAGGCGCCAACTCTCCATCCTCCACAAAGCCCCGGAGC	X	-	48781851-48781900	XqA5	Mus musculus heparan sulfate 6-O-sulfotransferase 2 (Hs6st2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	6OST2	6OST2
Mus musculus	RefSeq	ILMN_201054	ILMN_201054	LOC381972	XM_149976.3	XM_149976.3			38088293	XM_149976.3	LOC381972		ILMN_1224636	005340070	S	1252	CTTGCCATCGAGATGCTCCAGGTCTCCGGTTCTCTGAGCCAAGCAGGCAG										
Mus musculus	RefSeq	ILMN_209341	ILMN_209341	EIF3I	NM_018799.1	NM_018799.1		54709	9055369	NM_018799.1	Eif3i	NP_061269.1	ILMN_2789601	001190082	S	1024	CTGGGTCTCCATCCACAACAGAGAAGCTGCTCACAGAAGGGTTTAGACTG	4	-	129272310-129272359	4qD2.2	Mus musculus eukaryotic translation initiation factor 3, subunit I (Eif3i), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D4Ertd632e; 36kDa; Trip1; Eif3s2	D4Ertd632e; 36kDa; Trip1; Eif3s2
Mus musculus	RefSeq	ILMN_209341	ILMN_209341	EIF3I	NM_018799.1	NM_018799.1		54709	9055369	NM_018799.1	Eif3i	NP_061269.1	ILMN_2594881	000620639	S	1005	CGAGTTTGAGGCCTAAGTTCTGGGTCTCCATCCACAACAGAGAAGCTGCT	4	-	129272329-129272378	4qD2.2	Mus musculus eukaryotic translation initiation factor 3, subunit I (Eif3i), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D4Ertd632e; 36kDa; Trip1; Eif3s2	D4Ertd632e; 36kDa; Trip1; Eif3s2
Mus musculus	RefSeq	ILMN_209341	ILMN_209341	EIF3I	NM_018799.1	NM_018799.1		54709	9055369	NM_018799.1	Eif3i	NP_061269.1	ILMN_1258633	000620138	S	512	TCGGGGAGTGCGTCATCGCAGGCCACGAGAGCGGAGAGCTCAACCAGTAT	4	-	129272625-129272657:129274115-129274131	4qD2.2	Mus musculus eukaryotic translation initiation factor 3, subunit I (Eif3i), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D4Ertd632e; 36kDa; Trip1; Eif3s2	D4Ertd632e; 36kDa; Trip1; Eif3s2
Mus musculus	RefSeq	ILMN_261106	ILMN_261106	CRK	NM_133656.2	NM_133656.2		12928	31559994	NM_133656.2	Crk	NP_598417.2	ILMN_2987844	006550343	S	3125	CGTGAACTGTTTGGTTGGATTTGGCTGGGTGTAGCAGTTATTGGACCTCA	11	+	75519101-75519150	11qB5	Mus musculus v-crk sarcoma virus CT10 oncogene homolog (avian) (Crk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a phosphorylated amino acid residue within a protein [goid 45309] [evidence IDA]	Crk-II; Crk-III; Crko; Crkol; Crk-I; CrkIII; Crk3	Crk-II; Crk-III; Crko; Crkol; Crk-I; CrkIII; Crk3
Mus musculus	RefSeq	ILMN_208776	ILMN_208776	PLTP	NM_011125.2	NM_011125.2		18830	84042526	NM_011125.2	Pltp	NP_035255.1	ILMN_2589401	002260458	S	570	CCTGCGAGGCCTCTGTGTCTAAAATGAATATGGCCTTCGGGGGAACCTTC	2	-	164679767-164679816	2qH3	Mus musculus phospholipid transfer protein (Pltp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	OD107	OD107
Mus musculus	Riken	ILMN_202025	ILMN_202025	1600029O10RIK	ri|1600029O10|ZX00050K04|AK005563|581					AK005563	1600029O10Rik		ILMN_2546461	002680475	S	443	ATGTGCTGGGTGAGGTGGCTCGTGCCTTAAATCCCAGCTCCAGGGAGGTA										
Mus musculus	RefSeq	ILMN_200052	ILMN_200052	LOC384190	XM_357478.1	XM_357478.1			38080068	XM_357478.1	LOC384190		ILMN_2537434	007380259	S	135	CCGTTCGCTGGTGTTTGATCTCGGTGGCGGCAAGTTAGTCGTTTCGGTGT										
Mus musculus	RefSeq	ILMN_212644	ILMN_212644	CENPO	NM_134046.3	NM_134046.3		52504	31542078	NM_134046.3	Cenpo	NP_598807.2	ILMN_2650860	006960050	S	4012	CAGACGATCATCTAACCCCCGCCCACAAGGCTGCTAATAGGAACACCTGT	12	-	4213171-4213220	12qA1.1	Mus musculus centromere protein O (Cenpo), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D12Ertd482e; 8430427C03Rik; 2810429O05Rik; MGC36863	D12Ertd482e; 8430427C03Rik; 2810429O05Rik; MGC36863
Mus musculus	RefSeq	ILMN_212644	ILMN_212644	CENPO	NM_134046.3	NM_134046.3		52504	31542078	NM_134046.3	Cenpo	NP_598807.2	ILMN_2887846	002060458	S	4065	CCCTTGGTAAAAATTCCTTCACAACTGTCTCTCAGGACTATAGTGGCCAG	12	-	4213118-4213167	12qA1.1	Mus musculus centromere protein O (Cenpo), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D12Ertd482e; 8430427C03Rik; 2810429O05Rik; MGC36863	D12Ertd482e; 8430427C03Rik; 2810429O05Rik; MGC36863
Mus musculus	RefSeq	ILMN_212644	ILMN_212644	CENPO	NM_134046.3	NM_134046.3		52504	31542078	NM_134046.3	Cenpo	NP_598807.2	ILMN_2768773	004760735	S	3143	TGGTCATTTGTCCTTTCCCAAAGCTTTTCACTGCTTCCAAAAAAATCCCC	12	-	4214040-4214089	12qA1.1	Mus musculus centromere protein O (Cenpo), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D12Ertd482e; 8430427C03Rik; 2810429O05Rik; MGC36863	D12Ertd482e; 8430427C03Rik; 2810429O05Rik; MGC36863
Mus musculus	MEEBO	ILMN_217795	ILMN_217795	ATF7IP2	scl49442.10.1_3	XM_148109.3			38079692	XM_148109.3	Atf7ip2		ILMN_2687680	006020333	S	1191	CCATCTTTCACCCTGAAGTCAACTTCGAAAGCTGTTTTAAGATCAAAAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_212469	ILMN_212469	EPB7.2	scl19399.8_192	NM_013515.1			7710017	NM_013515.1	Epb7.2		ILMN_2641032	006330541	S	634	CGGATGACTGGGGGATCAAGGTGGAGCGGGTGGAGATTAAGGACGTGAAG										
Mus musculus	MEEBO	ILMN_212469	ILMN_212469	EPB7.2	scl19399.8_192	NM_013515.1			7710017	NM_013515.1	Epb7.2		ILMN_2641038	006400148	S	629	TGCCACGGATGACTGGGGGATCAAGGTGGAGCGGGTGGAGATTAAGGACG										
Mus musculus	RefSeq	ILMN_218514	ILMN_254360	OLFR958	NM_146330.1	NM_146330.1		258327	22129633	NM_146330.1	Olfr958	NP_666442.1	ILMN_1233657	004490762	S	757	GGACCTATAATCACTATATACCTACAGCCTACACCAAACCCCATGCTGGG	9	-	39357648-39357697	9qA5.1	Mus musculus olfactory receptor 958 (Olfr958), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR224-9	MOR224-9
Mus musculus	RefSeq	ILMN_211451	ILMN_211451	PTGES	NM_022415.2	NM_022415.2		64292	46852157	NM_022415.2	Ptges	NP_071860.1	ILMN_2786442	002370639	S	3312	GGTCTCTTGTCTGAGGCCATTTGTGGTGGCTTGAATAGGAATGGCCCCCC	2	-	30745276-30745325	2qB	Mus musculus prostaglandin E synthase (Ptges), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence IDA]	The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprosta-5,13-dienoate [goid 50220] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-9-alpha,15-dihydroxy-11-oxoprosta-5,13-dienoate [goid 4667] [evidence TAS]	mPGES-1; cPGES; 2410099E23Rik; D2Ertd369e; mPGES	mPGES-1; cPGES; 2410099E23Rik; D2Ertd369e; mPGES
Mus musculus	RefSeq	ILMN_211451	ILMN_211451	PTGES	NM_022415.2	NM_022415.2		64292	46852157	NM_022415.2	Ptges	NP_071860.1	ILMN_2616028	003890735	S	525	TGGCCCACCATCTGTGACCAGCAGCTGAAGCCTCCTCAGCTACCACAGTG	2	-	30748063-30748096:30748097-30748112	2qB	Mus musculus prostaglandin E synthase (Ptges), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence IDA]	The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprosta-5,13-dienoate [goid 50220] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-9-alpha,15-dihydroxy-11-oxoprosta-5,13-dienoate [goid 4667] [evidence TAS]	mPGES-1; cPGES; 2410099E23Rik; D2Ertd369e; mPGES	mPGES-1; cPGES; 2410099E23Rik; D2Ertd369e; mPGES
Mus musculus	RefSeq	ILMN_188866	ILMN_230158	ADAM15	NM_001037722.2	NM_001037722.2		11490	109148516	NM_001037722.2	Adam15	NP_001032811.2	ILMN_1240629	007320673	S	2405	AAGCTAGTGTGGTCAGCTTTCCAGTGCCCCCCTCCAGGCCGCTGCCACCT	3	-	89144808-89144857	3qF1	Mus musculus a disintegrin and metallopeptidase domain 15 (metargidin) (Adam15), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	metargidin; MDC15	metargidin; MDC15
Mus musculus	RefSeq	ILMN_191344	ILMN_230158	ADAM15	NM_001037722.2	NM_001037722.2		11490	109148516	NM_001037722.2	Adam15	NP_001032811.2	ILMN_1239236	004210747	S	2500	AATCCCCCCACTCGCCCTCTGCCCGCTGACCCTGTGGTGAGGCGCCCAAA	3	-	89144323-89144372	3qF1	Mus musculus a disintegrin and metallopeptidase domain 15 (metargidin) (Adam15), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	metargidin; MDC15	metargidin; MDC15
Mus musculus	RefSeq	ILMN_259522	ILMN_259522	FAM171A1	NM_001081161.1	NM_001081161.1		269233	124487204	NM_001081161.1	Fam171a1	NP_001074630.1	ILMN_3158937	001110047	A	3974	GCTCACCGAACGTGAGAGTATGGGCTGAGCAGGGGGATTGAATGTGACTG	2	+	3144909-3144958	2qA1	Mus musculus family with sequence similarity 171, member A1 (Fam171a1), mRNA.				AA409679; RP23-60E18.1	AA409679; RP23-60E18.1
Mus musculus	RefSeq	ILMN_219896	ILMN_259522	FAM171A1	NM_001081161.1	NM_001081161.1		269233	124487204	NM_001081161.1	Fam171a1	NP_001074630.1	ILMN_1244096	007160632	S	3979	CCGAACGTGAGAGTATGGGCTGAGCAGGGGGATTGAATGTGACTGTTAAA	2	+	3144914-3144963	2qA1	Mus musculus family with sequence similarity 171, member A1 (Fam171a1), mRNA.				AA409679; RP23-60E18.1	AA409679; RP23-60E18.1
Mus musculus	RefSeq	ILMN_213988	ILMN_213988	TMEM169	NM_175564.4	NM_175564.4		271711	146198521	NM_175564.4	Tmem169	NP_780773.1	ILMN_2643021	001660088	S	2704	CCAGAGGGGTTGATCAAGCTCCCCCAAAACCAGCCAGGGACATTTATTTA				1qC3	Mus musculus transmembrane protein 169 (Tmem169), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A830020B06Rik	A830020B06Rik
Mus musculus	RefSeq	ILMN_222519	ILMN_222519	RPA1	NM_026653.1	NM_026653.1		68275	18390320	NM_026653.1	Rpa1	NP_080929.1	ILMN_2750801	001340671	S	2747	GCTTCAGTTTGCATCAGTTACCGTTCGGTTGCCAGGCGGACCTGTGTACC	11	-	75113927-75113976	11qB5	Mus musculus replication protein A1 (Rpa1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [evidence ISO]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Rpa; 70kDa; 5031405K23Rik; AW557552; AA589576; RF-A; RP-A	Rpa; 70kDa; 5031405K23Rik; AW557552; AA589576; RF-A; RP-A
Mus musculus	RefSeq	ILMN_217910	ILMN_217910	AHDC1	NM_146155.3	NM_146155.3		230793	124244059	NM_146155.3	Ahdc1	NP_666267.3	ILMN_2689187	001450202	S	5615	TCTCCTCCACGCAGAAGCCGAAGGTGAGCCCTTTCTGCACAAAACCAGCA	4	+	132633038-132633087	4qD2.3	Mus musculus AT hook, DNA binding motif, containing 1 (Ahdc1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC29331; RP23-125F21.2; D030015G18Rik	MGC29331; RP23-125F21.2; D030015G18Rik
Mus musculus	RefSeq	ILMN_211070	ILMN_211070	CDC20	NM_023223.1	NM_023223.1		107995	12963586	NM_023223.1	Cdc20	NP_075712.1	ILMN_2867901	004570088	S	1265	GGCACATTCGCATTTGGAACGTCTGCTCAGGGGCCTGTCTGAGTGCTGTG	4	-	118107372-118107421	4qD2.1	Mus musculus cell division cycle 20 homolog (S. cerevisiae) (Cdc20), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C87100; p55CDC; 2310042N09Rik	C87100; p55CDC; 2310042N09Rik
Mus musculus	RefSeq	ILMN_211070	ILMN_211070	CDC20	NM_023223.1	NM_023223.1		107995	12963586	NM_023223.1	Cdc20	NP_075712.1	ILMN_2867899	004610722	S	1512	AGCTGATGAGACTCTACGGTTGTGGCGCTGCTTTGAGATGGACCCTGCCC	4	-	118105634-118105683	4qD2.1	Mus musculus cell division cycle 20 homolog (S. cerevisiae) (Cdc20), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C87100; p55CDC; 2310042N09Rik	C87100; p55CDC; 2310042N09Rik
Mus musculus	RefSeq	ILMN_211070	ILMN_211070	CDC20	NM_023223.1	NM_023223.1		107995	12963586	NM_023223.1	Cdc20	NP_075712.1	ILMN_2612206	004390228	S	1346	GTCTCCCCACTATAAGGAGCTGATCTCAGGTCACGGCTTTGCCCAGAACC	4	-	118106139-118106188	4qD2.1	Mus musculus cell division cycle 20 homolog (S. cerevisiae) (Cdc20), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C87100; p55CDC; 2310042N09Rik	C87100; p55CDC; 2310042N09Rik
Mus musculus	RefSeq	ILMN_211070	ILMN_211070	CDC20	NM_023223.1	NM_023223.1		107995	12963586	NM_023223.1	Cdc20	NP_075712.1	ILMN_2698767	001570754	S	12	TGTGTTCGGGAGAGCTGAGTACGGAGAGGGACCGGGCTGCTGCGAGCTGT	4	-	118109793-118109842	4qD2.1	Mus musculus cell division cycle 20 homolog (S. cerevisiae) (Cdc20), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C87100; p55CDC; 2310042N09Rik	C87100; p55CDC; 2310042N09Rik
Mus musculus	Riken	ILMN_206772	ILMN_206772	COL1A1	ri|D930048E22|PX00204B05|AK086730|1712					AK086730	Col1a1		ILMN_1246775	005360068	S	1200	CTGCCATCTGGGACATCAAGTTCATTTGTGAACCCATGCTTCCTCTCAGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence ISO]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IDA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]		
Mus musculus	RefSeq	ILMN_185689	ILMN_254487	GNAL	NM_010307.2	NM_010307.2		14680	124517707	NM_010307.2	Gnal	NP_034437.1	ILMN_2429164	005550753	S	3175	CATCTGTACCAACACATGATATGAGAGTGACTTTCAGTTCTCCTGCACTC	18	+	67384398-67384447	18qE1	Mus musculus guanine nucleotide binding protein, alpha stimulating, olfactory type (Gnal), transcript variant 1, mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence IDA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	MGC90869; 2610011C15Rik; AI843190; 9630020G10Rik; Gna10; Golf	MGC90869; 2610011C15Rik; AI843190; 9630020G10Rik; Gna10; Golf
Mus musculus	RefSeq	ILMN_254487	ILMN_254487	GNAL	NM_010307.2	NM_010307.2		14680	124517707	NM_010307.2	Gnal	NP_034437.1	ILMN_3036452	002970594	I	64	CGCGAGGCCAACAAAAAGATCGAGAAGCAGTTGCAGAAAGAGCGCCTGGC	18	+	67293543-67293592	18qE1	Mus musculus guanine nucleotide binding protein, alpha stimulating, olfactory type (Gnal), transcript variant 1, mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence IDA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	MGC90869; 2610011C15Rik; AI843190; 9630020G10Rik; Gna10; Golf	MGC90869; 2610011C15Rik; AI843190; 9630020G10Rik; Gna10; Golf
Mus musculus	RefSeq	ILMN_185689	ILMN_254487	GNAL	NM_010307.2	NM_010307.2		14680	124517707	NM_010307.2	Gnal	NP_034437.1	ILMN_1240054	007400324	S	726	GGTGATCCGGGAAGATAACAATACCAACAGACTTCGGGAATCACTGGACC	18	+	67373188-67373237	18qE1	Mus musculus guanine nucleotide binding protein, alpha stimulating, olfactory type (Gnal), transcript variant 1, mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence IDA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	MGC90869; 2610011C15Rik; AI843190; 9630020G10Rik; Gna10; Golf	MGC90869; 2610011C15Rik; AI843190; 9630020G10Rik; Gna10; Golf
Mus musculus	RefSeq	ILMN_249013	ILMN_249013	TMEM183A	NM_001042485.1	NM_001042485.1		57439	109809744	NM_001042485.1	Tmem183a	NP_001035950.1	ILMN_3143227	002750673	A	2877	CCACACTGAGGGGCATGCTGTCACTGGTTGAACAGATAGTGAGCCTGGGT	1	-	136242913-136242962	1qE4	Mus musculus transmembrane protein 183A (Tmem183a), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700020N19Rik; 1300007B12Rik	1700020N19Rik; 1300007B12Rik
Mus musculus	RefSeq	ILMN_216106	ILMN_249013	TMEM183A	NM_001042485.1	NM_001042485.1		57439	109809744	NM_001042485.1	Tmem183a	NP_001035950.1	ILMN_2667441	007400475	S	2894	CTGTCACTGGTTGAACAGATAGTGAGCCTGGGTCAATAAAAAGAACCACC	1	-	136242896-136242945	1qE4	Mus musculus transmembrane protein 183A (Tmem183a), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700020N19Rik; 1300007B12Rik	1700020N19Rik; 1300007B12Rik
Mus musculus	RefSeq	ILMN_208858	ILMN_208858	ITM2A	NM_008409.2	NM_008409.2		16431	51556453	NM_008409.2	Itm2a	NP_032435.2	ILMN_2590211	007000739	S	944	CAGATAAAGAGTATCCTTGATAATAAGAAGTCAGGAACTTACCGTCTGAC	X	-	104593172-104593221	XqD	Mus musculus integral membrane protein 2A (Itm2a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			AW108051; E25; Itm2	AW108051; E25; Itm2
Mus musculus	RefSeq	ILMN_208858	ILMN_208858	ITM2A	NM_008409.2	NM_008409.2		16431	51556453	NM_008409.2	Itm2a	NP_032435.2	ILMN_2607377	004390538	S	315	CCTAGGCCTCTCATTCATCTTGGCAGGACTGATTGTTGGTGGAGCCTGCA	X	-	104594928-104594977	XqD	Mus musculus integral membrane protein 2A (Itm2a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			AW108051; E25; Itm2	AW108051; E25; Itm2
Mus musculus	RefSeq	ILMN_228131	ILMN_228131	OLFR1133	NM_146351.1	NM_146351.1		258348	22129594	NM_146351.1	Olfr1133	NP_666463.1	ILMN_2976358	002750358	S	699	AGGCAGGCACAAAGCATTTTCCACCTGTGCTTCCCACCTCATGGCTTTGG	2	-	87485530-87485579	2qD	Mus musculus olfactory receptor 1133 (Olfr1133), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR176-2	MOR176-2
Mus musculus	MEEBO	ILMN_212800	ILMN_212800	CXCR4	scl16332.2_164	NM_009911.2			31560813	NM_009911.2	Cxcr4		ILMN_2630459	000160392	S	1500	TGTGTGGTAAATTGAATAAAGCTAGCCGTGATCCTCAGCTGTTGCTGCAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IGI]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]		
Mus musculus	Riken	ILMN_202580	ILMN_202580	2810035J02RIK	ri|2810035J02|ZX00083M03|AK012859|1070					AK012859	2810035J02Rik		ILMN_1255347	004260113	S	26	CGTGTCTCGAGGTAGGCTCCTCTCGGCTCTCCCATGGAGGAGGCGGCGCT										
Mus musculus	RefSeq	ILMN_220677	ILMN_220677	AZGP1	NM_013478.1	NM_013478.1		12007	7304910	NM_013478.1	Azgp1	NP_038506.1	ILMN_2725198	006660204	S	480	GCTAAAGTGGGAAGCAGAAAAGGTCTACGTGCAGCGAGCCAAGGCATACC	5	+	138428824-138428873	5qG2	Mus musculus alpha-2-glycoprotein 1, zinc (Azgp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence NAS]			
Mus musculus	RefSeq	ILMN_220677	ILMN_220677	AZGP1	NM_013478.1	NM_013478.1		12007	7304910	NM_013478.1	Azgp1	NP_038506.1	ILMN_2837080	007570044	S	1126	GTCAACCCTCACAATTGCCCTCATGCCTAGAACAGCACAGAAAGGAAGGC	5	+	138431311-138431360	5qG2	Mus musculus alpha-2-glycoprotein 1, zinc (Azgp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence NAS]			
Mus musculus	RefSeq	ILMN_199137	ILMN_250838	GM879	NM_001034874.2	NM_001034874.2		380702	142376508	NM_001034874.2	Gm879	NP_001030046.1	ILMN_1237848	003520471	S	1688	TCCCAGGCCATCACACCTGCTACACAGCCAGCAAGACTGAAGTGACCGTG	11	-	66030976-66031025	11qB3	Mus musculus gene model 879, (NCBI) (Gm879), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_225590	ILMN_225590	BANF2	NM_001044750.1	NM_001044750.1		403171	113679810	NM_001044750.1	Banf2	NP_001038215.1	ILMN_3105680	000070048	A	245	GAGTTCCAGAGGTGGATCATCTGCTGCTGTGGAGCTACGGAGTGTGAGGC	2	+	143899551-143899600	2qG1	Mus musculus barrier to autointegration factor 2 (Banf2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	RP23-17O9.1; Baf-L; Baf-like; Gm115	RP23-17O9.1; Baf-L; Baf-like; Gm115
Mus musculus	MEEBO	ILMN_213224	ILMN_213224	1810019D21RIK	scl069771.6_23				51764325	XM_489246	1810019D21Rik		ILMN_1227679	007560400	S	1110	CTCGACACCCCTGCAACCCATCGTCCTGACTATTTAAACTTCACAAGGTC										
Mus musculus	RefSeq	ILMN_217181	ILMN_217181	6720467C03RIK	NM_026558.2	NM_026558.2		68099	31980896	NM_026558.2	6720467C03Rik	NP_080834.2	ILMN_2837189	006480296	S	1029	GTGCACATCTGGAACTGGACAGATATCCACCTGCCGAACAAGGAAGGACC	4	-	12081098-12081125:12082796-12082817	4qA1	Mus musculus RIKEN cDNA 6720467C03 gene (6720467C03Rik), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217181	ILMN_217181	6720467C03RIK	NM_026558.2	NM_026558.2		68099	31980896	NM_026558.2	6720467C03Rik	NP_080834.2	ILMN_2837195	002190523	S	844	GAAATGTTATTTCATGGAAAAGCCTTAGAGGTCTTCACTGCTGCCTACCA	4	-	12084835-12084884	4qA1	Mus musculus RIKEN cDNA 6720467C03 gene (6720467C03Rik), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_215378	ILMN_215378	4930519G04RIK	NM_026263.2	NM_026263.2		67593	124286836	NM_026263.2	4930519G04Rik	NP_080539.1	ILMN_2658753	004900091	S	1713	ACTGTGATCCGGCAGCTCCAGTCAGCACCCAGTGTGTCCTAGAAACATAG	5	+	115333560-115333609	5qF	Mus musculus RIKEN cDNA 4930519G04 gene (4930519G04Rik), mRNA.				1700014B12Rik	1700014B12Rik
Mus musculus	RefSeq	ILMN_210774	ILMN_254491	KRTAP16-1	NM_130870.1	NM_130870.1		170651	21357426	NM_130870.1	Krtap16-1	NP_570940.1	ILMN_2609044	007000441	S	498	AGCCAAGAAGCTTTGGTGGTACTAAGCCAACTGAACATGTCAAATTCTAC	16	-	88873967-88874016	16qC3.3	Mus musculus keratin associated protein 16-1 (Krtap16-1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_190577	ILMN_231864	LOC641221	XM_918576.2	XM_918576.2		641221	94410402	XM_918576.2	LOC641221	XP_923669.1	ILMN_1246128	004060324	S	207	GAAAGGGTCTGGAGTGGCTGGGAGTAATATGGGCTGGTGGAAGCACAAAT					PREDICTED: Mus musculus similar to H prechain (AA -19 to 98) (LOC641221), mRNA.					
Mus musculus	RefSeq	ILMN_223560	ILMN_223560	CCDC68	NM_201362.1	NM_201362.1		381175	41235751	NM_201362.1	Ccdc68	NP_958750.1	ILMN_2765799	001980296	S	1331	ATTCTGCTTTAAACCTAAAAAAATGAAATTTGAATCTGTATCGTCAAATA	18	+	70094659-70094708	18qE2	Mus musculus coiled-coil domain containing 68 (Ccdc68), mRNA.				BC046343; MGC54896	BC046343; MGC54896
Mus musculus	RefSeq	ILMN_223560	ILMN_223560	CCDC68	NM_201362.1	NM_201362.1		381175	41235751	NM_201362.1	Ccdc68	NP_958750.1	ILMN_2929572	004200035	S	998	GTATCTAAGGCCGTCTCCACAAGCGAGTTGAAGACTGAAGGTGCTTCTCC	18	+	70092215-70092235:70094347-70094375	18qE2	Mus musculus coiled-coil domain containing 68 (Ccdc68), mRNA.				BC046343; MGC54896	BC046343; MGC54896
Mus musculus	Riken	ILMN_205628	ILMN_205628	4921520D03RIK	ri|4921520D03|PX00014F11|AK029539|5141					AK029539	4921520D03Rik		ILMN_2574030	006900187	S	4849	CAGGCTGAGAAAGCCATGAGGAGAAAGCTAGCAAGTAGCATCCCTCCATA										
Mus musculus	RefSeq	ILMN_219216	ILMN_212291	ADAM23	NM_011780.2	NM_011780.2		23792	82546877	NM_011780.2	Adam23	NP_035910.1	ILMN_1230599	003940286	S	6165	GGCTGCCTGTGAACGGAGATTCTGTCATCCTTACACGCATCTTTTAGTTG	1	+	63640153-63640202	1qC2	Mus musculus a disintegrin and metallopeptidase domain 23 (Adam23), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MDC3; AW046396	MDC3; AW046396
Mus musculus	RefSeq	ILMN_236729	ILMN_236729	LOC433721	NM_001081646.1	NM_001081646.1		433721	126032335	NM_001081646.1	LOC433721	NP_001075115.1	ILMN_2810827	002510541	S	1242	GAATCTTCCAGCACTGTATGGATCCTCAATGTCTCTATTTTATTGTAAAG	4	+	73303097-73303146		Mus musculus similar to hypothetical protein 4930503F14 (LOC433721), mRNA.					
Mus musculus	RefSeq	ILMN_212851	ILMN_212851	PIAS3	NM_146135.1	NM_146135.1		229615	22122654	NM_146135.1	Pias3	NP_666247.1	ILMN_2631014	004180689	S	2331	GTCGGGCGACAGGTCAGAGATGGACAGAGAACTCTATTTTGGATTGCAGA	3	+	96509443-96509492	3qF2.1	Mus musculus protein inhibitor of activated STAT 3 (Pias3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]	Pias3L; MGC27936	Pias3L; MGC27936
Mus musculus	RefSeq	ILMN_212851	ILMN_212851	PIAS3	NM_146135.1	NM_146135.1		229615	22122654	NM_146135.1	Pias3	NP_666247.1	ILMN_1227889	001980092	S	2294	GGTCTTTGACATCCATTCCGTTCTCTTTGACCATACAGTCGGGCGACAGG	3	+	96509406-96509455	3qF2.1	Mus musculus protein inhibitor of activated STAT 3 (Pias3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]	Pias3L; MGC27936	Pias3L; MGC27936
Mus musculus	RefSeq	ILMN_214948	ILMN_218483	LRRC50	NM_026648.3	NM_026648.3		68270	146141175	NM_026648.3	Lrrc50	NP_080924.1	ILMN_1218597	006900372	S	2489	TCCCCGAGGTAGCCCAGTGTGGGTCAGCTGTTGGAGGTTGATTGTGCCAC				8qE1	Mus musculus leucine rich repeat containing 50 (Lrrc50), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4930457P18Rik	4930457P18Rik
Mus musculus	RefSeq	ILMN_218483	ILMN_218483	LRRC50	NM_026648.3	NM_026648.3		68270	146141175	NM_026648.3	Lrrc50	NP_080924.1	ILMN_2696418	002100544	S	2128	GTGCGTGAAGCTACACCAATGTGCCTTGTACCCAACACGTCGGTATCCCC				8qE1	Mus musculus leucine rich repeat containing 50 (Lrrc50), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4930457P18Rik	4930457P18Rik
Mus musculus	MEEBO	ILMN_219079	ILMN_219079	4933440M02RIK	scl30703.5_1	NM_172408.1			27369528	NM_172408.1	4933440M02Rik		ILMN_2703989	000620286	S	3706	GTCATAGGTATCTCATTGGTGTCTTGTGCTTGATGGTCACCTGGACCTAG										
Mus musculus	MEEBO	ILMN_189408	ILMN_189408	FBXL17	scl49717.1.32_81				51770337	XM_128716	Fbxl17		ILMN_1249429	004860725	S	18	TGTACAACTGTCAGAGTGTTTGGGCCTTCTGTCCTGACTACTGGGTCAGG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]			
Mus musculus	MEEBO	ILMN_189408	ILMN_189408	FBXL17	scl49717.1.32_81				51770337	XM_128716	Fbxl17		ILMN_1258924	000990091	S	20	ATTATAGGCTTTTATTCTGTATCTCAGACCAACACTACAATGCTGTGTGG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]			
Mus musculus	RefSeq	ILMN_216304	ILMN_216304	FABP5	NM_010634.2	NM_010634.2		16592	118130073	NM_010634.2	Fabp5	NP_034764.1	ILMN_2685290	004830048	S	833	TGCCTTAAATCGTTTGAACTTTGTCAACTCAATAATTGAGACTATTCCTA	3	+	10016511-10016560	3qA1	Mus musculus fatty acid binding protein 5, epidermal (Fabp5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IGI]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	mal1; Klbp	mal1; Klbp
Mus musculus	RefSeq	ILMN_216304	ILMN_216304	FABP5	NM_010634.2	NM_010634.2		16592	118130073	NM_010634.2	Fabp5	NP_034764.1	ILMN_1235908	007550427	S	816	GCCCCGTCATTTAAGCTTGCCTTAAATCGTTTGAACTTTGTCAACTCAAT	3	+	10016494-10016543	3qA1	Mus musculus fatty acid binding protein 5, epidermal (Fabp5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IGI]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	mal1; Klbp	mal1; Klbp
Mus musculus	RefSeq	ILMN_219641	ILMN_219641	FLT1	NM_010228.3	NM_010228.3		14254	118129969	NM_010228.3	Flt1	NP_034358.2	ILMN_1227926	003830114	S	6214	GCTATCGGGATTCTCTGGTTCTGCTTAAAGACTTAGCTTTGGAGCCTATG	5	-	148373788-148373837	5qG3	Mus musculus FMS-like tyrosine kinase 1 (Flt1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IC ]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	VEGFR1; VEGFR-1; AI323757; Flt-1; sFlt1	VEGFR1; VEGFR-1; AI323757; Flt-1; sFlt1
Mus musculus	RefSeq	ILMN_219641	ILMN_219641	FLT1	NM_010228.3	NM_010228.3		14254	118129969	NM_010228.3	Flt1	NP_034358.2	ILMN_2732721	007650605	S	3232	CCCTCACCATGGAAGACCTGATTTCCTACAGTTTCCAAGTGGCCAGAGGC	5	-	148393702-148393751	5qG3	Mus musculus FMS-like tyrosine kinase 1 (Flt1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IC ]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	VEGFR1; VEGFR-1; AI323757; Flt-1; sFlt1	VEGFR1; VEGFR-1; AI323757; Flt-1; sFlt1
Mus musculus	MEEBO	ILMN_186591	ILMN_186591	2810402A17RIK	scl0067062.1_220				51772432	XM_489366	2810402A17Rik		ILMN_2436815	006480647	S	5	CCGTGCAGCTTTGAACCCTGCCTCTGACATGTTTACTTTGTCCTTAACCT										
Mus musculus	MEEBO	ILMN_209685	ILMN_209685	CXXC6	scl37890.3_480	XM_125673.2			38090491	XM_125673.2	Cxxc6		ILMN_2598232	001690450	S	3929	ACCCGAGACAATGTTGTTACCGTGTCCCCATACTCTCTCACTCATGTTGC										
Mus musculus	MEEBO	ILMN_218038	ILMN_218038	ATF7IP	scl072488.1_25	NM_175182.2			31340874	NM_175182.2	Atf7ip		ILMN_2690798	004570709	S	2490	GACTAATTTGTAAAACTCATCGCCTTGAGTCAGCAGAGAGGGAGGAGGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]		
Mus musculus	RefSeq	ILMN_192989	ILMN_192989	TST	NM_009437.4	NM_009437.4		22117	145966795	NM_009437.4	Tst	NP_033463.1	ILMN_2493175	000150373	S	757	TCATTGCCACGTGCCGCAAGGGGGTCACTGCCTGTCACGTTGCCCTGGCT				15qE1	Mus musculus thiosulfate sulfurtransferase, mitochondrial (Tst), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [evidence IEA]	Rhodanese	Rhodanese
Mus musculus	RefSeq	ILMN_217875	ILMN_217875	GRWD1	NM_153419.1	NM_153419.1		101612	23956277	NM_153419.1	Grwd1	NP_700468.1	ILMN_1215755	000990129	S	1263	GGATCGGTTAACTTGGCAAGGATCATTAGGCCTGTAGACTGCACCTCAGG	7	-	53081051-53081100	7qB4	Mus musculus glutamate-rich WD repeat containing 1 (Grwd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			A301; WDR28; GRWD; AI504353	A301; WDR28; GRWD; AI504353
Mus musculus	RefSeq	ILMN_217875	ILMN_217875	GRWD1	NM_153419.1	NM_153419.1		101612	23956277	NM_153419.1	Grwd1	NP_700468.1	ILMN_2815889	004830246	S	1381	GGATTTGGATTGACCCTTGGCTCTGCCTTACACCAAAGACTAGGTGCAGG	7	-	53080933-53080982	7qB4	Mus musculus glutamate-rich WD repeat containing 1 (Grwd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			A301; WDR28; GRWD; AI504353	A301; WDR28; GRWD; AI504353
Mus musculus	RefSeq	ILMN_250198	ILMN_250198	IGSF9	NM_033608.2	NM_033608.2		93842	24475735	NM_033608.2	Igsf9	NP_291086.1	ILMN_2804166	006400184	S	3946	CTACCTCTCTGTGTCTCGGTGGCCTGGTGGTAGGCTTGAGTGAGCTTGGT	1	+	174428753-174428802	1qH3	Mus musculus immunoglobulin superfamily, member 9 (Igsf9), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]		Dasm1; Ncaml; mKIAA1355; Kiaa1355-hp; NRT1; 644ETD8	Dasm1; Ncaml; mKIAA1355; Kiaa1355-hp; NRT1; 644ETD8
Mus musculus	RefSeq	ILMN_196647	ILMN_196647	D330001F17RIK	XM_283282.2	XM_283282.2			38077828	XM_283282.2	D330001F17Rik		ILMN_1247612	005550474	S	5285	CCATCCTTTTCCACACTTGCCACAGCATAGCCCAGGTCATCGCCAAGCGC										
Mus musculus	RefSeq	ILMN_196647	ILMN_196647	D330001F17RIK	XM_283282.2	XM_283282.2			38077828	XM_283282.2	D330001F17Rik		ILMN_2613806	004150328	S	5370	CTGCTGCCAGCCAGGGTCAAGACTGTGGTGCCCCAATTTATTGCCCAATA										
Mus musculus	RefSeq	ILMN_216489	ILMN_216489	CBFB	NM_022309.3	NM_022309.3		12400	142362453	NM_022309.3	Cbfb	NP_071704.2	ILMN_2757743	004860692	S	2544	CAGTCCGGCAGTCAGTAAGATCACATGGTGTTAATGTGGCCGTCCCTCTG	8	+	107741550-107741599	8qD3	Mus musculus core binding factor beta (Cbfb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized precursor cell acquires specialized features of B cells, T cells, or natural killer cells [goid 30098] [evidence IMP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PEBP2b; Pebp2; PEA2; Pebpb2; AI893578	PEBP2b; Pebp2; PEA2; Pebpb2; AI893578
Mus musculus	RefSeq	ILMN_216489	ILMN_216489	CBFB	NM_022309.3	NM_022309.3		12400	142362453	NM_022309.3	Cbfb	NP_071704.2	ILMN_2671644	002710452	S	515	CAGCTGGCAGGGAGAACAGCGACAAACACCTAGCCGGGAATATGTCGACT	8	+	107702540-107702589	8qD3	Mus musculus core binding factor beta (Cbfb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized precursor cell acquires specialized features of B cells, T cells, or natural killer cells [goid 30098] [evidence IMP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PEBP2b; Pebp2; PEA2; Pebpb2; AI893578	PEBP2b; Pebp2; PEA2; Pebpb2; AI893578
Mus musculus	RefSeq	ILMN_198409	ILMN_198409	LOC381217	XM_355152.1	XM_355152.1			38084880	XM_355152.1	LOC381217		ILMN_2531586	001030424	S	663	ACTCCATACGAAGCTGTAGTGAGCCAGACTGACCAGGAGCAGGAGTCTTC										
Mus musculus	Riken	ILMN_206928	ILMN_206928	D330046C14RIK	ri|D330046C14|PX00193J11|AK084811|1631					AK084811	D330046C14Rik		ILMN_1252594	000430192	S	1279	GACGTCACAGCAGAATGTAAGCCGTGCCTTTACTGGGAGTAATCTGAGCC										
Mus musculus	RefSeq	ILMN_187197	ILMN_238658	LITAF	NM_019980.1	NM_019980.1		56722	9910577	NM_019980.1	Litaf	NP_064364.1	ILMN_2665490	000150019	S	1833	GCCTAGCCATTGCCTGAGCTGTTCATACAATGATCCGGAAGTGCTAGCCA	16	-	10959645-10959694	16qA1	Mus musculus LPS-induced TN factor (Litaf), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TBX1; 3222402J11Rik; N4WBP3; C85531	TBX1; 3222402J11Rik; N4WBP3; C85531
Mus musculus	RefSeq	ILMN_220652	ILMN_220652	KLHL10	NM_025727.1	NM_025727.1		66720	13385187	NM_025727.1	Klhl10	NP_080003.1	ILMN_2921031	005340075	S	1840	GTTGGGGAGTATGCAGCTAGACGGGACAACTTCACGGGATTAGCACTGCG	11	+	100272942-100272991	11qD	Mus musculus kelch-like 10 (Drosophila) (Klhl10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The process by which the anatomical structures of male genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 48808] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4921517C11Rik	4921517C11Rik
Mus musculus	RefSeq	ILMN_234822	ILMN_234822	FN3K	NM_001038699.1	NM_001038699.1		63828	84662726	NM_001038699.1	Fn3k	NP_001033788.1	ILMN_3162855	007040086	I	3396	TTTCAGAAACTGCCCTGTGGGGCTGAGAGGTGACTAACAGCAGGTACTGC	11	+	121304378-121304427	11qE2	Mus musculus fructosamine 3 kinase (Fn3k), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	The chemical reactions and pathways involving fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group [goid 30389] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of fructosamine to form fructosamine-3-kinase [goid 30387] [evidence IDA]	2310074G21Rik	2310074G21Rik
Mus musculus	Riken	ILMN_204527	ILMN_204527	B230382E02RIK	ri|B230382E02|PX00161D14|AK046418|2192					AK046418	B230382E02Rik		ILMN_1245436	006350477	S	1658	CATTGCATGCATATGTGCATACCCACCCATAGTCCTCCCCCCCAACACAC										
Mus musculus	RefSeq	ILMN_211130	ILMN_260698	SAMD1	NM_001081415.1	NM_001081415.1		666704	124487220	NM_001081415.1	Samd1	NP_001074884.1	ILMN_1224665	000580451	S	1732	CAGCAGTGGAGTATGGGGTTGGAGGACTTGGTTGGCTCATTTACCTGGGG	8	+	86523946-86523995	8qC3	Mus musculus sterile alpha motif domain containing 1 (Samd1), mRNA.				AA589507	AA589507
Mus musculus	RefSeq	ILMN_197786	ILMN_234773	LOC666840	XR_001926.2	XR_001926.2		666840	149252072	XR_001926.2	LOC666840		ILMN_1217673	000020017	S	747	GTGCCTACAAGGTGATCAAGCTGAAAGCCATTAGCCTCTCTGTGGCAAAC	4	-	10366186-10366235	4qA1	PREDICTED: Mus musculus similar to Ldha protein (LOC666840), misc RNA.					
Mus musculus	RefSeq	ILMN_213627	ILMN_254552	9130227L01RIK	XM_920363.2	XM_920363.2		329159	94363580	XM_920363.2	9130227L01Rik	XP_925456.1	ILMN_2639118	003310494	S	1074	CCCCACAGCCTATTCTGGTCCTAGTTGGTAGCAATAAGCACTGACATTCT				1qC1.2	PREDICTED: Mus musculus RIKEN cDNA 9130227L01 gene (9130227L01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_191742	ILMN_208716	NR1I3	NM_009803.4	NM_009803.4		12355	145966686	NM_009803.4	Nr1i3	NP_033933.2	ILMN_2481771	000630471	S	1368	TTCCCGTGTGGGGTCCAGCGCTGTACCCTTTCCAGGCCAGTGTATCCCTG				1qH3	Mus musculus nuclear receptor subfamily 1, group I, member 3 (Nr1i3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MB67; ESTM32; CAR; MGC107281; Care2; AI551208; CAR-beta; AA209988	MB67; ESTM32; CAR; MGC107281; Care2; AI551208; CAR-beta; AA209988
Mus musculus	RefSeq	ILMN_208716	ILMN_208716	NR1I3	NM_009803.4	NM_009803.4		12355	145966686	NM_009803.4	Nr1i3	NP_033933.2	ILMN_1212992	000540575	S	1173	GCTGATGGGCCTGCTGGCTGACCTCCGGAGTATAAACAATGCATACTCCT				1qH3	Mus musculus nuclear receptor subfamily 1, group I, member 3 (Nr1i3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MB67; ESTM32; CAR; MGC107281; Care2; AI551208; CAR-beta; AA209988	MB67; ESTM32; CAR; MGC107281; Care2; AI551208; CAR-beta; AA209988
Mus musculus	RefSeq	ILMN_208716	ILMN_208716	NR1I3	NM_009803.4	NM_009803.4		12355	145966686	NM_009803.4	Nr1i3	NP_033933.2	ILMN_2588846	002600195	S	1335	TGGAAAGGGTACAGCGCTGGACCCCACACGGGAACCAGCAGGAAGGAGCT				1qH3	Mus musculus nuclear receptor subfamily 1, group I, member 3 (Nr1i3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MB67; ESTM32; CAR; MGC107281; Care2; AI551208; CAR-beta; AA209988	MB67; ESTM32; CAR; MGC107281; Care2; AI551208; CAR-beta; AA209988
Mus musculus	RefSeq	ILMN_195574	ILMN_208716	NR1I3	NM_009803.4	NM_009803.4		12355	145966686	NM_009803.4	Nr1i3	NP_033933.2	ILMN_1221049	002100138	S	1222	AGGAGTATGCATTGTTTATACTCCGGAGGTCAGCCAGCAGGCCCATCAGC				1qH3	Mus musculus nuclear receptor subfamily 1, group I, member 3 (Nr1i3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MB67; ESTM32; CAR; MGC107281; Care2; AI551208; CAR-beta; AA209988	MB67; ESTM32; CAR; MGC107281; Care2; AI551208; CAR-beta; AA209988
Mus musculus	RefSeq	ILMN_199408	ILMN_199408	OLFR494	NM_146737.1	NM_146737.1		258732	22129366	NM_146737.1	Olfr494	NP_666948.1	ILMN_2535125	001050639	S	241	ACACCCAATATGCTTGTCAACTTCCTCGTAAAGCAAAATACCATCTCCTA	7	+	115511246-115511295	7qE3	Mus musculus olfactory receptor 494 (Olfr494), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR204-10	MOR204-10
Mus musculus	RefSeq	ILMN_199408	ILMN_199408	OLFR494	NM_146737.1	NM_146737.1		258732	22129366	NM_146737.1	Olfr494	NP_666948.1	ILMN_2782683	000360184	S	809	CCACAGACCAGAATAAGGTGGTGTCTGTGTTCTACATGGTGGTCATCCCC	7	+	115511814-115511863	7qE3	Mus musculus olfactory receptor 494 (Olfr494), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR204-10	MOR204-10
Mus musculus	RefSeq	ILMN_199408	ILMN_199408	OLFR494	NM_146737.1	NM_146737.1		258732	22129366	NM_146737.1	Olfr494	NP_666948.1	ILMN_2706613	000020452	S	422	CAGAGTCCTGTATCCAGTTAGTCGTGGGATCTTATATAGGTGGCTTTCTT	7	+	115511427-115511476	7qE3	Mus musculus olfactory receptor 494 (Olfr494), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR204-10	MOR204-10
Mus musculus	RefSeq	ILMN_212224	ILMN_212224	FOXK1	NM_199068.2	NM_199068.2		17425	82546825	NM_199068.2	Foxk1	NP_951031.2	ILMN_1224018	000620300	S	2016	AGTAGCCGCTAATGCAGCGCCAACCCCAGCCGCCTCCACTACCACATCTG	5	+	142932539-142932588	5qG2	Mus musculus forkhead box K1 (Foxk1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	A630048H08Rik; Mnf; AI463295	A630048H08Rik; Mnf; AI463295
Mus musculus	RefSeq	ILMN_185855	ILMN_212224	FOXK1	NM_199068.2	NM_199068.2		17425	82546825	NM_199068.2	Foxk1	NP_951031.2	ILMN_1245680	002630711	S	1179	ACAGAGAGGTGTCTCCTGCTTCCGCACCCCCTTCGGGCCTCTGTCCTCAC	5	+	142927536-142927585	5qG2	Mus musculus forkhead box K1 (Foxk1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	A630048H08Rik; Mnf; AI463295	A630048H08Rik; Mnf; AI463295
Mus musculus	RefSeq	ILMN_212224	ILMN_212224	FOXK1	NM_199068.2	NM_199068.2		17425	82546825	NM_199068.2	Foxk1	NP_951031.2	ILMN_3059798	001510273	I	6488	GGCTGACTCTGAGCTCCGTGACCCACTGAATGTTCATGTTCTCTGTCCTG	5	+	142937011-142937060	5qG2	Mus musculus forkhead box K1 (Foxk1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	A630048H08Rik; Mnf; AI463295	A630048H08Rik; Mnf; AI463295
Mus musculus	RefSeq	ILMN_212224	ILMN_212224	FOXK1	NM_199068.2	NM_199068.2		17425	82546825	NM_199068.2	Foxk1	NP_951031.2	ILMN_3137073	004610626	A	3726	GTGGTCACAGGAGAGCAGATGACCGGGATGGATAAGTCCAAGCTCCGATG	5	+	142934249-142934298	5qG2	Mus musculus forkhead box K1 (Foxk1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	A630048H08Rik; Mnf; AI463295	A630048H08Rik; Mnf; AI463295
Mus musculus	RefSeq	ILMN_214566	ILMN_214566	RPS6KL1	NM_146244.3	NM_146244.3		238323	118130187	NM_146244.3	Rps6kl1	NP_666356.2	ILMN_2649333	003800327	S	2257	GCCACTCGCCACTCCTGACCCCTAACTTCTGATTTCTGACTTTGGAGAAT	12	-	86476727-86476776	12qD2	Mus musculus ribosomal protein S6 kinase-like 1 (Rps6kl1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	A830084F09Rik; MGC38756; AW046440	A830084F09Rik; MGC38756; AW046440
Mus musculus	RefSeq	ILMN_254210	ILMN_254210	TMEM81	NM_029025.1	NM_029025.1		74626	21312825	NM_029025.1	Tmem81	NP_083301.1	ILMN_2865473	004220008	S	1435	GCCAGAGTTGGCTAGGAGGCTGGGAAGATGTAACCTCAGTAGTTCAGGGC	1	+	134335878-134335927	1qE4	Mus musculus transmembrane protein 81 (Tmem81), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI465369; 4930429O20Rik	AI465369; 4930429O20Rik
Mus musculus	RefSeq	ILMN_187825	ILMN_240840	BRAF	NM_139294.5	NM_139294.5		109880	153791903	NM_139294.5	Braf	NP_647455.3	ILMN_2447445	006040349	S	9719	GCAGTCAATCTTTATTATAGCAGTATTCGCATATTCACATCAATTACATA				6qB1	Mus musculus Braf transforming gene (Braf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5057] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AA473386; C230098H17; AA387315; 9930012E13Rik; C87398; AA120551; D6Ertd631e; B-raf; Braf2; Braf-2	AA473386; C230098H17; AA387315; 9930012E13Rik; C87398; AA120551; D6Ertd631e; B-raf; Braf2; Braf-2
Mus musculus	RefSeq	ILMN_184458	ILMN_240840	BRAF	NM_139294.5	NM_139294.5		109880	153791903	NM_139294.5	Braf	NP_647455.3	ILMN_2418791	004760546	S	9500	TCATGTAAATTTGTATAATGGAAAATATTGTTCAGTTTGGATAGAAAGCA				6qB1	Mus musculus Braf transforming gene (Braf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 5057] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AA473386; C230098H17; AA387315; 9930012E13Rik; C87398; AA120551; D6Ertd631e; B-raf; Braf2; Braf-2	AA473386; C230098H17; AA387315; 9930012E13Rik; C87398; AA120551; D6Ertd631e; B-raf; Braf2; Braf-2
Mus musculus	RefSeq	ILMN_218751	ILMN_218751	GTF2IRD2	NM_053266.1	NM_053266.1		114674	16716602	NM_053266.1	Gtf2ird2	NP_444496.1	ILMN_1242837	003780500	S	3323	CACAGCTGTTCAGATGACCTGTGACACCTGTCTGTAGTTTGGTAAAGCCC	5	+	134692236-134692285	5qG2	Mus musculus GTF2I repeat domain containing 2 (Gtf2ird2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1700012P16Rik	1700012P16Rik
Mus musculus	RefSeq	ILMN_218751	ILMN_218751	GTF2IRD2	NM_053266.1	NM_053266.1		114674	16716602	NM_053266.1	Gtf2ird2	NP_444496.1	ILMN_1247989	004640608	S	1360	CGGGTATCTGGAGATCAGCTCCATGAGGAGGATCCTGGATGCTGCAGACT	5	+	134672317-134672366	5qG2	Mus musculus GTF2I repeat domain containing 2 (Gtf2ird2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1700012P16Rik	1700012P16Rik
Mus musculus	RefSeq	ILMN_218751	ILMN_218751	GTF2IRD2	NM_053266.1	NM_053266.1		114674	16716602	NM_053266.1	Gtf2ird2	NP_444496.1	ILMN_2808186	005360379	S	3182	CTGGCCATTCCTCTATGTGGAGACCTAGAATGTTCCAGACCTAATAGCCT	5	+	134692095-134692144	5qG2	Mus musculus GTF2I repeat domain containing 2 (Gtf2ird2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1700012P16Rik	1700012P16Rik
Mus musculus	MEEBO	ILMN_187726	ILMN_187726	RAD18	scl28558.13_421				10946725	NM_021385	Rad18		ILMN_2652042	004390632	S	1463	GACTCGCCGCACTAGAGCCAGTGAATGTGTTGAGATTGAACCAAGAAACA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187726	ILMN_187726	RAD18	scl28558.13_421				10946725	NM_021385	Rad18		ILMN_2446592	004880484	S	5	CACCTGTGTTTACTTATAGACTAGGTTTATAATGGGGCGGGGTAGGGGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221380	ILMN_221380	FPGS	NM_010236.1	NM_010236.1		14287	33469106	NM_010236.1	Fpgs	NP_034366.1	ILMN_2870443	004670270	S	2112	GGGCCCTTGCCTGGCATTTGGGGACTGTGTTGCTGGAACTAATTGAAGCT	2	-	32538187-32538236	2qB	Mus musculus folylpolyglutamyl synthetase (Fpgs), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]	AA408187	AA408187
Mus musculus	RefSeq	ILMN_221380	ILMN_221380	FPGS	NM_010236.1	NM_010236.1		14287	33469106	NM_010236.1	Fpgs	NP_034366.1	ILMN_2747070	002690008	S	524	CCATGCCCTCTTACTTCCGCTTCCTCACACTCATGGCCTTCCATGTCTTC	2	-	32543291-32543340	2qB	Mus musculus folylpolyglutamyl synthetase (Fpgs), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]	AA408187	AA408187
Mus musculus	RefSeq	ILMN_221380	ILMN_221380	FPGS	NM_010236.1	NM_010236.1		14287	33469106	NM_010236.1	Fpgs	NP_034366.1	ILMN_2769594	001710274	S	1843	GATTTTTTCGGACTGGCCCAGGGTCCTGGGCTCTTGGTAGAGTGTAGGGA	2	-	32538456-32538505	2qB	Mus musculus folylpolyglutamyl synthetase (Fpgs), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]	AA408187	AA408187
Mus musculus	RefSeq	ILMN_221380	ILMN_221380	FPGS	NM_010236.1	NM_010236.1		14287	33469106	NM_010236.1	Fpgs	NP_034366.1	ILMN_1233334	002690132	S	834	GTTGTACCTGTGTCCGCCATTGGAAGCCCTGGAGGAGGTTGGACTGCCAT	2	-	32542350-32542399	2qB	Mus musculus folylpolyglutamyl synthetase (Fpgs), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]	AA408187	AA408187
Mus musculus	RefSeq	ILMN_245226	ILMN_245226	OLFR514	NM_146726.1	NM_146726.1		258721	22129388	NM_146726.1	Olfr514	NP_666937.1	ILMN_2955084	002360136	S	461	CAGCTACTGTGTCGGTCACATGGGTGTTTAGCTTCCCCTTCTGTGGTCCT	7	-	115969001-115969050	7qE3	Mus musculus olfactory receptor 514 (Olfr514), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR268-1	MOR268-1
Mus musculus	Riken	ILMN_205760	ILMN_205760	B130017N24RIK	ri|B130017N24|PX00157L10|AK044987|2615					AK044987	B130017N24Rik		ILMN_1230028	003870368	S	1018	GTTCTTGCTTGGTCTGTGGGGCCCTTGGGAGAGGTGTTGGTGTAGCATTG										
Mus musculus	RefSeq	ILMN_256629	ILMN_256629	EG624367	NM_001037921.1	NM_001037921.1		624367	85702315	NM_001037921.1	EG624367	NP_001033010.1	ILMN_2960286	003180010	S	1447	CAGTTGCTGAGGAGTCCATATCCCAACTAGGGGCACCCAACACTGAGCAT	14	+	47150212-47150261	14qC1	Mus musculus predicted gene, EG624367 (EG624367), mRNA.					
Mus musculus	MEEBO	ILMN_212236	ILMN_212236	ITCH	scl016396.2_0	XM_192925.3			38075202	XM_192925.3	Itch		ILMN_1223898	002690273	S	89	CACAGTGGCCTTCTGGAAACAACGCCTTAACCCTAAGAAGTGACTCAGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence ISA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]		
Mus musculus	Riken	ILMN_203617	ILMN_203617	MAPK6	ri|A930039J04|PX00067F17|AK044752|3232					AK044752	Mapk6		ILMN_1213359	001780349	S	3094	CAGGATTTGTTTTGGGTTGAATTGTGTGTGTGAAGTGAGGGCAGGCGTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199585	ILMN_199585	LOC382761	XM_356664.1	XM_356664.1			38074722	XM_356664.1	LOC382761		ILMN_2535750	000160722	S	183	TGGAGGGTGCGTGCCTTCTTGTTACCTGGCAGTGTTTGAAGTCGGTGGCC										
Mus musculus	RefSeq	ILMN_201379	ILMN_319325	LOC624198	XR_032846.1	XR_032846.1		624198	149258393	XR_032846.1	LOC624198		ILMN_1235502	000290619	S	884	CCAGTACACACTGATGGCTCAGGCGGTGGACAGGGACACCAACAAACCAC	8	+	19687743-19687792	8qA1.3	PREDICTED: Mus musculus similar to cadherin 11 (LOC624198), misc RNA.					
Mus musculus	RefSeq	ILMN_200734	ILMN_257279	VMN2R43	NM_198961.2	NM_198961.2		381838	142383352	NM_198961.2	Vmn2r43	NP_945199.1	ILMN_1249256	005670528	S	2236	CTGTGTTCTTGGATACTTGGCCTGCCTGGCACTTGGAAGCTTCATTGTGG	7	+	9882360-9882409	7qA1	Mus musculus vomeronasal 2, receptor 43 (Vmn2r43), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	EC2-V2R	EC2-V2R
Mus musculus	RefSeq	ILMN_218424	ILMN_218424	4732429D16RIK	NM_145437.2	NM_145437.2		217305	118130119	NM_145437.2	4732429D16Rik	NP_663412.1	ILMN_1230287	004920162	S	2140	AGTCAGCCACATTCCCACTCATGCTCAGACCAACAATCATGGTTAAACTC	11	-	114844007-114844056	11qE2	Mus musculus RIKEN cDNA 4732429D16 gene (4732429D16Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	LMIR4; CLM5; RP23-331L12.3; clm-5	LMIR4; CLM5; RP23-331L12.3; clm-5
Mus musculus	RefSeq	ILMN_223162	ILMN_223162	OLIG1	NM_016968.4	NM_016968.4		50914	59894798	NM_016968.4	Olig1	NP_058664.2	ILMN_2760105	004150605	S	2079	CCGAATTTAACTGGCATTTTATTTGACCTCTAACTCTGTCCCTCCTGAAC	16	+	91272092-91272141	16qC3.3	Mus musculus oligodendrocyte transcription factor 1 (Olig1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISS]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW494459; AI836478; Olg-1; Bhlhb6; Oligo1	AW494459; AI836478; Olg-1; Bhlhb6; Oligo1
Mus musculus	MEEBO	ILMN_219673	ILMN_219673	PGD	scl0110208.1_282	NM_025801.1			21313271	NM_025801.1	Pgd		ILMN_2712066	000070630	S	2065	AGGAGTCGGTGGGCAGAGGCTCTCCTGTCGGGTATTTCTTACTGGCACAG							The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule [goid 19322] [evidence IDA]	Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+ [goid 4616] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = 6-phospho-2-dehydro-D-gluconate + NADPH [goid 8114] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198068	ILMN_255679	PRHOXNB	NM_001039678.1	NM_001039678.1		231903	89179305	NM_001039678.1	Prhoxnb	NP_001034767.1	ILMN_1229187	000380519	S	586	GGACACCCTGCGCCCCGGAATGGCTTGGGCCTGGAAAGACAATTCATACA	5	-	148126590-148126639	5qG3	Mus musculus parahox cluster neighbor (Prhoxnb), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The chemical reactions and pathways involving purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine [goid 6144] [evidence IEA]; The chemical reactions and pathways resulting in the formation of allantoin, (2,5-dioxo-4-imidazolidinyl)urea [goid 19428] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IDA]	Urad; EG231903	Urad; EG231903
Mus musculus	RefSeq	ILMN_255679	ILMN_255679	PRHOXNB	NM_001039678.1	NM_001039678.1		231903	89179305	NM_001039678.1	Prhoxnb	NP_001034767.1	ILMN_2819424	005900685	S	61	TTTGGGAACATTGTTGAGAAATGCCCTCTGATTGCCGCTGCTGTCTGGTC	5	-	148133806-148133855	5qG3	Mus musculus parahox cluster neighbor (Prhoxnb), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The chemical reactions and pathways involving purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine [goid 6144] [evidence IEA]; The chemical reactions and pathways resulting in the formation of allantoin, (2,5-dioxo-4-imidazolidinyl)urea [goid 19428] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IDA]	Urad; EG231903	Urad; EG231903
Mus musculus	RefSeq	ILMN_197725	ILMN_231412	EG545124	XM_619343.3	XM_619343.3		545124	94398794	XM_619343.3	EG545124	XP_619343.1	ILMN_1219885	001340035	S	2130	CCCGACCTGGAAAGCGCTAAAAAATGAACTTTCCAGTTAGCCATGCGCTG	15	+	82348813-82348862	15qE1	PREDICTED: Mus musculus predicted gene, EG545124, transcript variant 1 (EG545124), mRNA.					
Mus musculus	RefSeq	ILMN_210238	ILMN_210238	THAP1	NM_199042.1	NM_199042.1		73754	40068501	NM_199042.1	Thap1	NP_950243.1	ILMN_2603593	003830563	S	385	GTACAGCAGCATCTGCTCGGAGCACTTCACCCCGGACTGCTTTAAGAGGG	8	+	27271322-27271371	8qA2	Mus musculus THAP domain containing, apoptosis associated protein 1 (Thap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4833431A01Rik	4833431A01Rik
Mus musculus	RefSeq	ILMN_210238	ILMN_210238	THAP1	NM_199042.1	NM_199042.1		73754	40068501	NM_199042.1	Thap1	NP_950243.1	ILMN_2907066	004280632	S	681	AGCTGGAGCAGCAGGTGGAGAAACTCAGGAAGAAGCTCAAGACGGCCCAG	8	+	27273081-27273130	8qA2	Mus musculus THAP domain containing, apoptosis associated protein 1 (Thap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4833431A01Rik	4833431A01Rik
Mus musculus	RefSeq	ILMN_210238	ILMN_210238	THAP1	NM_199042.1	NM_199042.1		73754	40068501	NM_199042.1	Thap1	NP_950243.1	ILMN_1258989	000130168	S	127	TGCTGACCGACGCCACCGAGAGCGGCGAGCGTTATCAAGGCCGAGCGCGG	8	+	27268811-27268860	8qA2	Mus musculus THAP domain containing, apoptosis associated protein 1 (Thap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4833431A01Rik	4833431A01Rik
Mus musculus	RefSeq	ILMN_214113	ILMN_214113	SFXN2	NM_053196.3	NM_053196.3		94279	86439983	NM_053196.3	Sfxn2	NP_444426.3	ILMN_1213922	006380523	S	1263	TTTATTGGATTCCAGAGGGCAAAATTCAAAAGGGGATCAAGGTGGTTGGG	19	+	46669441-46669490	19qC3	Mus musculus sideroflexin 2 (Sfxn2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	F630107H02Rik; C79732	F630107H02Rik; C79732
Mus musculus	RefSeq	ILMN_214113	ILMN_214113	SFXN2	NM_053196.3	NM_053196.3		94279	86439983	NM_053196.3	Sfxn2	NP_444426.3	ILMN_2729281	000070193	S	1008	GCCAGAGCTACGGGACACCATCAAGGCCAAGTATGGAGAACAAGTCCTCT	19	+	46669186-46669235	19qC3	Mus musculus sideroflexin 2 (Sfxn2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	F630107H02Rik; C79732	F630107H02Rik; C79732
Mus musculus	RefSeq	ILMN_214113	ILMN_214113	SFXN2	NM_053196.3	NM_053196.3		94279	86439983	NM_053196.3	Sfxn2	NP_444426.3	ILMN_2760835	001780364	S	569	CAGCTACTACTACTGCGGTGGCCACTGCAGTGGGCATGAACATGTGGACA	19	+	46662448-46662497	19qC3	Mus musculus sideroflexin 2 (Sfxn2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	F630107H02Rik; C79732	F630107H02Rik; C79732
Mus musculus	RefSeq	ILMN_216546	ILMN_241743	PPIA	NM_008907.1	NM_008907.1		268373	6679438	NM_008907.1	Ppia	NP_032933.1	ILMN_1250983	002030575	S	294	GATGAGAACTTCATCCTAAAGCATACAGGTCCTGGCATCTTGTCCATGGC	11	+	6319179-6319228	11qA1	Mus musculus peptidylprolyl isomerase A (Ppia), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CyP-18; Cphn; CypA; 2700098C05	CyP-18; Cphn; CypA; 2700098C05
Mus musculus	RefSeq	ILMN_223097	ILMN_241743	PPIA	NM_008907.1	NM_008907.1		268373	6679438	NM_008907.1	Ppia	NP_032933.1	ILMN_1233954	004180114	S	323	TCCTGGCATCTTGTCCATGGCAAATGCTGGACCAAACACAAACGGTTCCC	11	+	6319208-6319257	11qA1	Mus musculus peptidylprolyl isomerase A (Ppia), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CyP-18; Cphn; CypA; 2700098C05	CyP-18; Cphn; CypA; 2700098C05
Mus musculus	RefSeq	ILMN_216397	ILMN_312680	LOC100046298	XM_001475994.1	XM_001475994.1		100046298	149252211	XM_001475994.1	LOC100046298	XP_001476044.1	ILMN_1230192	003890414	S	943	GTGAAGTTTACGCATGATCAGATAATGCGGCGATATGGAGAACAGCCTGC					PREDICTED: Mus musculus hypothetical protein LOC100046298 (LOC100046298), mRNA.					
Mus musculus	MEEBO	ILMN_216410	ILMN_216410	CPA1	scl30262.10.1_11	XM_284174.1			28522843	XM_284174.1	Cpa1		ILMN_2670847	001340102	S	1347	CCTACAGCCAGGGCATCAAGTATTCCTTCACTTTTGAGCTGAGGGACACT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221890	ILMN_221890	MED16	NM_198107.1	NM_198107.1		216154	37674219	NM_198107.1	Med16	NP_932775.1	ILMN_1213200	001170491	S	2710	TGCGGCATCTCTAGGGCCTGAAGTCCCATGGTCATATCCAAGCCAGTGTG	10	-	79357864-79357913	10qC1	Mus musculus mediator complex subunit 16 (Med16), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IC ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Thrap5; 95kDa; A630083L04; Trap95	Thrap5; 95kDa; A630083L04; Trap95
Mus musculus	RefSeq	ILMN_231526	ILMN_231526	MYOZ3	NM_133363.1	NM_133363.1		170947	19111171	NM_133363.1	Myoz3	NP_579941.1	ILMN_3011346	007150519	I	841	AGCCTCAGCCTGAAGCTACAATTCCCTGGGCTCAAGAAACATGCTTGTCT	18	-	60701664-60701713	18qD3	Mus musculus myozenin 3 (Myoz3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC123456; MGC123457	MGC123456; MGC123457
Mus musculus	RefSeq	ILMN_231526	ILMN_231526	MYOZ3	NM_133363.1	NM_133363.1		170947	19111171	NM_133363.1	Myoz3	NP_579941.1	ILMN_3081836	001170433	A	619	CGAGTGGCAGCAGAAGTCACACTCCCATCCCCCGAGACTATCGCAACTTC	18	-	60701886-60701887:60704305-60704352	18qD3	Mus musculus myozenin 3 (Myoz3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC123456; MGC123457	MGC123456; MGC123457
Mus musculus	Riken	ILMN_206989	ILMN_206989	5330423N11RIK	ri|5330423N11|PX00643A18|AK077331|1561					AK077331	5330423N11Rik		ILMN_1253083	000240465	S	1151	CCTTCCACAGTACCCCAGAGAAGAAAGGCACCCCAGAGAAATGGCTGCTA										
Mus musculus	Riken	ILMN_202815	ILMN_202815	ANXA4	ri|6720405P20|PX00059K17|AK032703|2187					AK032703	Anxa4		ILMN_2552516	004830343	S	1597	GCCAGTTCTTGTTCTAGCATAGCCCCAAGACAGCCTTCCCCACTACCTAC						The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence ISA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214246	ILMN_214246	MTAP2	NM_008632.2	NM_008632.2		17756	68341934	NM_008632.2	Mtap2	NP_032658.2	ILMN_3137552	006220632	A	5230	CTCTGTATGCTGGGATCCCAAGGTTTCAACACACCATCTGTGGGGGGTTC	1	+	66488960-66489009	1qC3	Mus musculus microtubule-associated protein 2 (Mtap2), transcript variant 2, mRNA. XM_901527 XM_901529 XM_901531 XM_901532 XM_901536 XM_901538 XM_901540	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mtap-2; MAP-2; MAP2	Mtap-2; MAP-2; MAP2
Mus musculus	RefSeq	ILMN_214144	ILMN_214144	HP	NM_017370.1	NM_017370.1		15439	8850218	NM_017370.1	Hp	NP_059066.1	ILMN_2668509	001170564	S	64	CTGTTGTCACTCTCCTGCTCTGGGGTCAGCTTTTTGCTGTGGAGTTGGGC	8	-	112101403-112101452	8qD3	Mus musculus haptoglobin (Hp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 30492] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	HP-1	HP-1
Mus musculus	RefSeq	ILMN_214144	ILMN_214144	HP	NM_017370.1	NM_017370.1		15439	8850218	NM_017370.1	Hp	NP_059066.1	ILMN_2668510	004390113	S	74	CTCTCCTGCTCTGGGGTCAGCTTTTTGCTGTGGAGTTGGGCAATGATGCC	8	-	112101393-112101442	8qD3	Mus musculus haptoglobin (Hp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 30492] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	HP-1	HP-1
Mus musculus	RefSeq	ILMN_214144	ILMN_214144	HP	NM_017370.1	NM_017370.1		15439	8850218	NM_017370.1	Hp	NP_059066.1	ILMN_2944824	000840044	S	844	ACGAGTCCCGTTGGGGTCCAGCCTATCTTGAACGAGCACACCTTCTGTGC	8	-	112099370-112099419	8qD3	Mus musculus haptoglobin (Hp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 30492] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	HP-1	HP-1
Mus musculus	RefSeq	ILMN_194107	ILMN_234386	SLC1A2	NM_011393.2	NM_011393.2		20511	133892173	NM_011393.2	Slc1a2	NP_035523.1	ILMN_2642339	000940725	S	1962	GGTGGTTGTCAGAACTTTAATGGCCTTCAGATATTCTCTTCCTCAAAGGA	2	+	102618098-102618147	2qE2	Mus musculus solute carrier family 1 (glial high affinity glutamate transporter), member 2 (Slc1a2), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IDA]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups [goid 43200] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glutamate(out) + Na+(out) = glutamate(in) + Na+(in) [goid 15501] [evidence IDA]	Eaat2; MGLT1; 1700091C19Rik; GLT-1; GLT1	Eaat2; MGLT1; 1700091C19Rik; GLT-1; GLT1
Mus musculus	RefSeq	ILMN_219662	ILMN_219662	SFRS3	NM_013663.4	NM_013663.4		20383	141803005	NM_013663.4	Sfrs3	NP_038691.1	ILMN_2733399	001340040	S	2327	CATCTAGGTGCCTAAGTGTCATGATGGCATCTCTACCCTGTATTGGACTG	17	+	29179958-29180007	17qA3.3	Mus musculus splicing factor, arginine/serine-rich 3 (SRp20) (Sfrs3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence TAS]	AL024116; X16	AL024116; X16
Mus musculus	RefSeq	ILMN_197888	ILMN_197888	LOC230461	XM_143894.1	XM_143894.1			20835225	XM_143894.1	LOC230461		ILMN_1218147	000840575	S	1150	AGGGAGGGCAAAATGATCCTCACCAATTTGACTGCTCTGCACAGGGACCC										
Mus musculus	RefSeq	ILMN_199151	ILMN_199151	LOC327963	XM_282967.1	XM_282967.1			28510395	XM_282967.1	LOC327963		ILMN_2534229	006280274	S	338	GGATTGTTGATGCAGAGGAAACACAACTTTGTCTTGTGAACATACTGAGA										
Mus musculus	RefSeq	ILMN_258475	ILMN_258475	STX3	NM_152220.1	NM_152220.1		20908	70778910	NM_152220.1	Stx3	NP_689344.1	ILMN_3162879	005820601	I	2871	TCGTTAGTGATAAGCCTCAGACCTTTGGTGGTCCCTGCCAGTATCCCGGA	19	-	11852325-11852374	19qA	Mus musculus syntaxin 3 (Stx3), transcript variant A, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	AV006285; AW536415; AA960228	AV006285; AW536415; AA960228
Mus musculus	RefSeq	ILMN_254380	ILMN_254380	OTTMUSG00000002177	NM_001025244.1	NM_001025244.1		432602	68989244	NM_001025244.1	OTTMUSG00000002177	NP_001020415.1	ILMN_2868414	006590181	S	839	GGTTACCCCCAATTTTTGTGTACTCTTTTTCTTCTTTCTGCTCACTTCCG	11	+	99753217-99753266	11qD	Mus musculus predicted gene, OTTMUSG00000002177 (OTTMUSG00000002177), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_254380	ILMN_254380	OTTMUSG00000002177	NM_001025244.1	NM_001025244.1		432602	68989244	NM_001025244.1	OTTMUSG00000002177	NP_001020415.1	ILMN_2868418	002140086	S	45	TCTCCTGACACCATGACCCACACCTGTCAGCCATGCTGCTGCAAGACCAC	11	+	99752423-99752433:99752434-99752472	11qD	Mus musculus predicted gene, OTTMUSG00000002177 (OTTMUSG00000002177), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_203153	ILMN_228109	2810407C02RIK	NM_001040396.2	NM_001040396.2		69227	143770877	NM_001040396.2	2810407C02Rik	NP_001035486.2	ILMN_1256474	001940360	S	2822	GAACACGTGCTCTCAGTGTGTGAGTGGCAGTGGCTGTGCACTCGCATTCG	3	+	58396742-58396791	3qD	Mus musculus RIKEN cDNA 2810407C02 gene (2810407C02Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SelT; 5730408P04Rik	SelT; 5730408P04Rik
Mus musculus	RefSeq	ILMN_201686	ILMN_228109	2810407C02RIK	NM_001040396.2	NM_001040396.2		69227	143770877	NM_001040396.2	2810407C02Rik	NP_001035486.2	ILMN_1215213	006040056	S	781	GTTTCTTGGCAGGCTCGTTGTACCTCTTGGAAAACCTCAGTGCAAGACAG	3	+	58394701-58394750	3qD	Mus musculus RIKEN cDNA 2810407C02 gene (2810407C02Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SelT; 5730408P04Rik	SelT; 5730408P04Rik
Mus musculus	RefSeq	ILMN_191181	ILMN_228109	2810407C02RIK	NM_001040396.2	NM_001040396.2		69227	143770877	NM_001040396.2	2810407C02Rik	NP_001035486.2	ILMN_1244600	000240072	S	249	AGTACATGCGGGTTATCAGCCAGCGGTATCCAGACATCCGCATTGAAGGC	3	+	58389185-58389234	3qD	Mus musculus RIKEN cDNA 2810407C02 gene (2810407C02Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SelT; 5730408P04Rik	SelT; 5730408P04Rik
Mus musculus	RefSeq	ILMN_204583	ILMN_228109	2810407C02RIK	NM_001040396.2	NM_001040396.2		69227	143770877	NM_001040396.2	2810407C02Rik	NP_001035486.2	ILMN_1240134	006220138	S	2670	TGTCTGTGCTCCATTAATCAGAAGATCGCAACGTATCAGCAGGCTGGCTA	3	+	58396590-58396639	3qD	Mus musculus RIKEN cDNA 2810407C02 gene (2810407C02Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SelT; 5730408P04Rik	SelT; 5730408P04Rik
Mus musculus	RefSeq	ILMN_213904	ILMN_231218	3010003L21RIK	XR_005252.1	XR_005252.1		109163	94378336	XR_005252.1	3010003L21Rik		ILMN_2642052	000450475	S	1606	CTGAAGGCAATAACCAACTTCTGCAAATTCGCCCCGCGCACCACATGCAC	6	+	148904158-148904207		PREDICTED: Mus musculus RIKEN cDNA 3010003L21 gene (3010003L21Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_214176	ILMN_214176	EFHA1	NM_028643.1	NM_028643.1		68514	27477042	NM_028643.1	Efha1	NP_082919.1	ILMN_2899174	002850338	S	1943	ATAGAGTGTCCTCTCCCAGACACTCCCAGGGGAGCTCAGCCAGCAAAGGA	14	-	56870707-56870756	14qC3	Mus musculus EF hand domain family A1 (Efha1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	4833427E09Rik; Smhs2; AU041871; 1110008L20Rik	4833427E09Rik; Smhs2; AU041871; 1110008L20Rik
Mus musculus	Riken	ILMN_202175	ILMN_202175	3110045I18RIK	ri|3110045I18|ZX00072I07|AK014181|1924					AK014181	3110045I18Rik		ILMN_1246445	003370598	S	1725	CCTTGTGTGCAACACTAATAACCTATTGCCCTACCTTGATCTTTTTCCCC										
Mus musculus	RefSeq	ILMN_200091	ILMN_200091	LOC381651	XM_355614.1	XM_355614.1			38080304	XM_355614.1	LOC381651		ILMN_2537556	006270458	S	388	GCAGGGAGAACTGAGAAGCGCAGACTTGTTGAAGCAAAAGAATCGGCGCC										
Mus musculus	RefSeq	ILMN_221560	ILMN_221560	SLC25A22	NM_026646.2	NM_026646.2		68267	142384143	NM_026646.2	Slc25a22	NP_080922.1	ILMN_2737237	006900020	S	2243	CCTGCCCCGGCCATGTGATTGTGTTTGGTGATTGACTGAAGTGCTGGTGC	7	-	148615887-148615936	7qF5	Mus musculus solute carrier family 25 (mitochondrial carrier, glutamate), member 22 (Slc25a22), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1300006L01Rik; AI060884	1300006L01Rik; AI060884
Mus musculus	RefSeq	ILMN_216773	ILMN_216773	CD33	NM_021293.2	NM_021293.2		12489	145301547	NM_021293.2	Cd33	NP_067268.1	ILMN_2675223	006860440	S	1151	GCAATAAGAGACCCGGGACAGAGTCTGTGCTCCTTCATTTATATCCCCAC				7qB4	Mus musculus CD33 antigen (Cd33), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	gp67; Siglec-3	gp67; Siglec-3
Mus musculus	Riken	ILMN_204079	ILMN_204079	A730015C16RIK	ri|A730015C16|PX00149M10|AK042682|1221					AK042682	A730015C16Rik		ILMN_1245537	001440255	S	723	GCGGCATGATCTCCAGGGGCATCCATGTGCGGATGTTTGGCGTCAACTTC										
Mus musculus	RefSeq	ILMN_219870	ILMN_219870	PAX4	NM_011038.1	NM_011038.1		18506	45544612	NM_011038.1	Pax4	NP_035168.1	ILMN_2714629	000160458	S	1218	GGACAAGTGCCATCAACCCATTGCTCAAACTGGCCATAAGAGGCCTCTAT	6	-	28392358-28392377:28392378-28392407	6qA3.3	Mus musculus paired box gene 4 (Pax4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Pax-4	Pax-4
Mus musculus	RefSeq	ILMN_237843	ILMN_237843	STAP2	NM_145934.1	NM_145934.1		106766	22122356	NM_145934.1	Stap2	NP_666046.1	ILMN_2834687	007550008	S	1236	CCGCTGAGCTGGAAGAGAAACTACAGAAGAGGAGGGCACTGGAACACTGA	17	-	56136709-56136719:56136720-56136758	17qD	Mus musculus signal transducing adaptor family member 2 (Stap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Stap2	Stap2
Mus musculus	RefSeq	ILMN_223043	ILMN_237843	STAP2	NM_145934.1	NM_145934.1		106766	22122356	NM_145934.1	Stap2	NP_666046.1	ILMN_2758562	004590019	S	964	ACCTCCCCTGCCTCAGTTACCAGACACGGATGAGAACTACGTGACTCCCA	17	-	56137229-56137278	17qD	Mus musculus signal transducing adaptor family member 2 (Stap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Stap2	Stap2
Mus musculus	RefSeq	ILMN_197946	ILMN_244053	EG667450	XM_001002194.1	XM_001002194.1		667450	94400533	XM_001002194.1	EG667450	XP_001002194.1	ILMN_2529927	000870369	S	241	GAAGAAGCAAGAGTCAAGGGCAGAATGGGAGACACAGCAAACTGGATCCG				16qB4	PREDICTED: Mus musculus predicted gene, EG667450 (EG667450), mRNA.					
Mus musculus	RefSeq	ILMN_216570	ILMN_216570	FOXN1	NM_008238.1	NM_008238.1		15218	6680210	NM_008238.1	Foxn1	NP_032264.1	ILMN_1240731	004010767	S	2091	GGGCTCACCTTAAAGGTCAAAGAAGGAAAACACTACCTGTCTCCTATGCC	11	-	78175036-78175085	11qB5	Mus musculus forkhead box N1 (Foxn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	nu; Whn; MGC124316; nude; Hfh11; MGC124317; D11Bhm185e	nu; Whn; MGC124316; nude; Hfh11; MGC124317; D11Bhm185e
Mus musculus	RefSeq	ILMN_221705	ILMN_221705	DAZAP2	NM_011873.2	NM_011873.2		23994	31982752	NM_011873.2	Dazap2	NP_036003.2	ILMN_2739287	002030576	S	1644	CTAAATCTTGTGTTCTGTACATGTGATGTTTGACTGTACCATCGACTGTT	15	+	100451014-100451063	15qF1	Mus musculus DAZ associated protein 2 (Dazap2), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Brbp; AI314727; mKIAA0058; MGC25222; Prtb; gt6-12	Brbp; AI314727; mKIAA0058; MGC25222; Prtb; gt6-12
Mus musculus	RefSeq	ILMN_204811	ILMN_218963	CSGALNACT1	NM_172753.3	NM_172753.3		234356	58332429	NM_172753.3	Csgalnact1	NP_766341.3	ILMN_1238770	006290753	S	281	CTAGCAGAAGGGGGCGGTACTTTCCCTCTGGACCCTGACTTGGAAGCCAA	8	-	71080935-71080984	8qB3.3	Mus musculus chondroitin sulfate N-acetylgalactosaminyltransferase 1 (Csgalnact1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP [goid 47237] [evidence IEA]	CSGalNAcT-1	CSGalNAcT-1
Mus musculus	RefSeq	ILMN_218963	ILMN_218963	CSGALNACT1	NM_172753.3	NM_172753.3		234356	58332429	NM_172753.3	Csgalnact1	NP_766341.3	ILMN_2702444	005090619	S	3494	ATCTAGTGAGACGGAAGATTTTGCTACATTTCCATTCACTCCTGGCTATG	8	-	70881067-70881116	8qB3.3	Mus musculus chondroitin sulfate N-acetylgalactosaminyltransferase 1 (Csgalnact1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP [goid 47237] [evidence IEA]	CSGalNAcT-1	CSGalNAcT-1
Mus musculus	RefSeq	ILMN_187066	ILMN_258671	EEA1	NM_001001932.3	NM_001001932.3		216238	92859696	NM_001001932.3	Eea1	NP_001001932.1	ILMN_2440868	005720017	S	7016	CCATGCCTCTTAAAAGGTCTTCATGATTACTTTCTATAGCTTTGAGGTCC	10	+	95507332-95507381	10qC2	Mus musculus early endosome antigen 1 (Eea1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; An enzyme complex that catalyzes the formation of hydroxypyruvate and alanine from serine and pyruvate [goid 5969] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	B230358H09Rik; A430109M19Rik; ZFYVE2	B230358H09Rik; A430109M19Rik; ZFYVE2
Mus musculus	RefSeq	ILMN_214674	ILMN_258671	EEA1	NM_001001932.3	NM_001001932.3		216238	92859696	NM_001001932.3	Eea1	NP_001001932.1	ILMN_2650638	001570717	S	747	TTAAGCAAATGAAAGATCTGTTTGAACAGAAAGCAGCCCAACTTGCTACT	10	+	95457573-95457622	10qC2	Mus musculus early endosome antigen 1 (Eea1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; An enzyme complex that catalyzes the formation of hydroxypyruvate and alanine from serine and pyruvate [goid 5969] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	B230358H09Rik; A430109M19Rik; ZFYVE2	B230358H09Rik; A430109M19Rik; ZFYVE2
Mus musculus	RefSeq	ILMN_214674	ILMN_258671	EEA1	NM_001001932.3	NM_001001932.3		216238	92859696	NM_001001932.3	Eea1	NP_001001932.1	ILMN_1218149	000130309	S	3019	GCAGGAGGACCTGAAAAAGTCACTCGAGAAAGAGAAAGAGACTTCTCAGC	10	+	95489748-95489787:95491027-95491036	10qC2	Mus musculus early endosome antigen 1 (Eea1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; An enzyme complex that catalyzes the formation of hydroxypyruvate and alanine from serine and pyruvate [goid 5969] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	B230358H09Rik; A430109M19Rik; ZFYVE2	B230358H09Rik; A430109M19Rik; ZFYVE2
Mus musculus	RefSeq	ILMN_242119	ILMN_242119	ADCY1	NM_009622.1	NM_009622.1		432530	61888831	NM_009622.1	Adcy1	NP_033752.1	ILMN_2859960	007560367	S	11883	GGGATAGAGGGTGCATGGACAAAGGGGGCATTTTATCCCACACGATACAC	11	+	7078133-7078182	11qA1	Mus musculus adenylate cyclase 1 (Adcy1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IGI]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence IGI]	mKIAA4070; D11Bwg1392e; I-AC; brl; KIAA4070; AC1	mKIAA4070; D11Bwg1392e; I-AC; brl; KIAA4070; AC1
Mus musculus	RefSeq	ILMN_196544	ILMN_242119	ADCY1	NM_009622.1	NM_009622.1		432530	61888831	NM_009622.1	Adcy1	NP_033752.1	ILMN_1236763	002570170	S	3430	CAGTACCTGTCATCCACAGCAGCAGGGAAGGAAGCCTAGTGGAGCCCATG	11	+	7069680-7069718:7069719-7069729	11qA1	Mus musculus adenylate cyclase 1 (Adcy1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IGI]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence IGI]	mKIAA4070; D11Bwg1392e; I-AC; brl; KIAA4070; AC1	mKIAA4070; D11Bwg1392e; I-AC; brl; KIAA4070; AC1
Mus musculus	MEEBO	ILMN_213133	ILMN_213133	GDI2	scl0014568.1_110	NM_008111.1			6679984	NM_008111.1	Gdi2		ILMN_2634006	006290494	S	1390	CCAGCCCTGGAGCTTTTGGAACCAATTGAGCAGAAATTCGTTAGCATCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IPI]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IPI]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IPI]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218996	ILMN_218996	1810009A15RIK	NM_025463.1	NM_025463.1		66276	13384875	NM_025463.1	1810009A15Rik	NP_079739.1	ILMN_2872246	005290427	S	319	CAGCCACAGCCCAAGCAACAAAAGAAGATAAAAGCTCCCCAGGACGTAGC	19	+	8957489-8957538	19qA	Mus musculus RIKEN cDNA 1810009A15 gene (1810009A15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213754	ILMN_213754	PCDHB22	NM_053147.3	NM_053147.3		93893	148728177	NM_053147.3	Pcdhb22	NP_444377.3	ILMN_2640457	001030632	S	2706	AGGACACTTCACGCTCCTGATTGAATTTGCCATAGTCTGTCCTAAAGAAC				18qB3	Mus musculus protocadherin beta 22 (Pcdhb22), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbV; Pcdhb15	PcdhbV; Pcdhb15
Mus musculus	RefSeq	ILMN_200653	ILMN_200653	LOC383433	XM_357049.1	XM_357049.1			38084899	XM_357049.1	LOC383433		ILMN_2539526	001780646	S	211	AGCAGCATGAGGACAGAGGAAGGTGCAGAGGATGAAGATCTGAAAAGCCA										
Mus musculus	RefSeq	ILMN_218829	ILMN_218829	TAF5L	NM_133966.2	NM_133966.2		102162	118129904	NM_133966.2	Taf5l	NP_598727.1	ILMN_2700751	004890634	S	2471	GGAGGTTCTTCATTGGCTGCACTTGTGTCAGCACTTGTACCCTGGGGAGA	8	-	126520582-126520631	8qE2	Mus musculus TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor (Taf5l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AI849020; 1110005N04Rik	AI849020; 1110005N04Rik
Mus musculus	Riken	ILMN_202640	ILMN_202640	AUH	ri|5730588O03|PX00093A16|AK019978|1649					AK019978	Auh		ILMN_2551152	000240270	S	1339	GGCAGGCCCCATGCCCAGGAACAGCTGGCCAACACAAAATGAACTTAATG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9083] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps: poly(A) tail shortening, deadenylylation-dependent decapping, and decay of the transcript body, and that can regulate mRNA stability [goid 288] [evidence TAS]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O [goid 4300] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = trans-3-methylglutaconyl-CoA + H2O [goid 4490] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219094	ILMN_219094	SNIP1	NM_175246.3	NM_175246.3		76793	142377792	NM_175246.3	Snip1	NP_780455.1	ILMN_2704199	001580537	S	1727	ATTGGCTGTCTTCGATAAACAGACACTCTGTGCGATGTCTGTGTGACAAG	4	+	124750689-124750738	4qD2.2	Mus musculus Smad nuclear interacting protein 1 (Snip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2410133M08Rik	2410133M08Rik
Mus musculus	MEEBO	ILMN_184218	ILMN_184218	6446580_744	6446580_744						6446580_744		ILMN_2416828	006900577	S	16	CTGGTTTTTGGTGCAAATGCTGTCCAACTACAACATCGGATATCAGGGCT										
Mus musculus	RefSeq	ILMN_229799	ILMN_229799	CHSY1	NM_001081163.1	NM_001081163.1		269941	124487198	NM_001081163.1	Chsy1	NP_001074632.1	ILMN_3095473	002370167	A	3530	CCAACCCTTCTTTTTAGAGGGTGCAGTATTATTAAGGGGGACAGAGTGGC	7	+	73318038-73318087	7qC	Mus musculus chondroitin sulfate synthase 1 (Chsy1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate [goid 30206] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,3)-N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50510] [evidence IEA]; Catalysis of the reaction: D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP [goid 47238] [evidence ISO]	KIAA0990; mKIAA0990	KIAA0990; mKIAA0990
Mus musculus	RefSeq	ILMN_217037	ILMN_217037	EFR3A	NM_133766.3	NM_133766.3		76740	118130889	NM_133766.3	Efr3a	NP_598527.2	ILMN_2694758	003400196	S	2171	TTGACCAACAAGATTGCGGAGTCCCTGGGTGGCAGCGGGTACAGTGTGGA	15	+	65689069-65689118	15qD1	Mus musculus EFR3 homolog A (S. cerevisiae) (Efr3a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence ISO]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]	KIAA0143; BB071175; A130089M23Rik; mKIAA0143; D030063F01Rik; C76891	KIAA0143; BB071175; A130089M23Rik; mKIAA0143; D030063F01Rik; C76891
Mus musculus	MEEBO	ILMN_184537	ILMN_184537	9430047L24RIK	scl22525.2.1_101						9430047L24Rik		ILMN_2419480	001850491	S	19	AGAAATCTGCCTGGGCCAAGCCTCTCCGGTACTTTATCTGTTCCTGTACA										
Mus musculus	RefSeq	ILMN_214654	ILMN_214654	MRE11A	NM_018736.2	NM_018736.2		17535	41056098	NM_018736.2	Mre11a	NP_061206.1	ILMN_1250857	005870193	S	2447	GGGGCTGCTCTGCCATATCGAGAACATTAACTTCCTGACAGAACTGTGTT	9	+	14638304-14638353	9qA2	Mus musculus meiotic recombination 11 homolog A (S. cerevisiae) (Mre11a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	Mre11b; Mre11	Mre11b; Mre11
Mus musculus	RefSeq	ILMN_214654	ILMN_214654	MRE11A	NM_018736.2	NM_018736.2		17535	41056098	NM_018736.2	Mre11a	NP_061206.1	ILMN_1227920	001470670	S	1934	CTCGAGGCAGGAGCTCAAAGGCCACCTCATCAACATCTAGAAACATGTCC	9	+	14631000-14631049	9qA2	Mus musculus meiotic recombination 11 homolog A (S. cerevisiae) (Mre11a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	Mre11b; Mre11	Mre11b; Mre11
Mus musculus	RefSeq	ILMN_214654	ILMN_214654	MRE11A	NM_018736.2	NM_018736.2		17535	41056098	NM_018736.2	Mre11a	NP_061206.1	ILMN_2982250	007650307	S	2643	GGCATGTGCTGTAACCATCTCCTAGATCTCCAGAAAGCCAGGCCCTCCTG	9	+	14638500-14638549	9qA2	Mus musculus meiotic recombination 11 homolog A (S. cerevisiae) (Mre11a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	Mre11b; Mre11	Mre11b; Mre11
Mus musculus	RefSeq	ILMN_225051	ILMN_225051	ATP2B1	NM_026482.1	NM_026482.1		67972	62234486	NM_026482.1	Atp2b1	NP_080758.1	ILMN_2878021	004780039	S	3571	TGGGGACCTTACTCTGGGGCCAGCTTATTTCAACCATTCCAACCAGCCGC	10	+	98479642-98479664:98481349-98481375	10qC3	Mus musculus ATPase, Ca++ transporting, plasma membrane 1 (Atp2b1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810442I22Rik; E130111D10Rik; Pmca1	2810442I22Rik; E130111D10Rik; Pmca1
Mus musculus	RefSeq	ILMN_247617	ILMN_247617	FANCD2	NM_001033244.2	NM_001033244.2		211651	141802416	NM_001033244.2	Fancd2	NP_001028416.1	ILMN_3161617	001940020	S	4578	TTCCCCAGTGGGTTTCACAGGTTGTCTAACCTCCAGGTCCCTGGTTCAGG	6	+	113546080-113546129	6qE3	Mus musculus Fanconi anemia, complementation group D2 (Fancd2), mRNA. XM_899748 XM_899764 XM_899772 XM_899780 XM_899788 XM_917138 XM_924688 XM_924694 XM_924701 XM_924706 XM_924709 XM_924714 XM_924717 XM_924719 XM_924720	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IMP]		FACD; FA-D2; FA4; FANCD; FAD; AU015151; 2410150O07Rik; BB137857	FACD; FA-D2; FA4; FANCD; FAD; AU015151; 2410150O07Rik; BB137857
Mus musculus	RefSeq	ILMN_211997	ILMN_211997	SMTN	NM_013870.1	NM_013870.1		29856	7305504	NM_013870.1	Smtn	NP_038898.1	ILMN_2955973	003370243	S	3093	CGCCATGAGCTGCGTTTGCGCGGCAAGAATGTCTAGCCACTCTGCTCACA	11	-	3417665-3417714	11qA1	Mus musculus smoothelin (Smtn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	smsmo	smsmo
Mus musculus	RefSeq	ILMN_186279	ILMN_248955	JAZF1	NM_173406.2	NM_173406.2		231986	142349394	NM_173406.2	Jazf1	NP_775582.1	ILMN_1220232	002070612	S	1978	AGTGGCCTACATCTGGATCGTCCTGGAGCTTCTCTCACCGACAGTACCAT	6	-	52718930-52718979	6qB3	Mus musculus JAZF zinc finger 1 (Jazf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISA]	Jaz1; AI591476; Tip27; C820002C15	Jaz1; AI591476; Tip27; C820002C15
Mus musculus	RefSeq	ILMN_196322	ILMN_196322	0610007P08RIK	NM_023507.2	NM_023507.2			31340591	NM_023507.2	0610007P08Rik		ILMN_1233643	006900500	S	1007	CAGTAACGCAAGTCAGCTGCAAGTCTCCTCATTCATCTTTGCCCAACACG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]		
Mus musculus	Riken	ILMN_205321	ILMN_205321	NISCH	ri|9630029O10|PX00116I05|AK036043|2396					AK036043	Nisch		ILMN_1254218	006370129	S	2297	GCCCATGAGTTCAAGGCCAGCCTGCTGACAAAGTGAGACCCTATCTCGAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]		
Mus musculus	RefSeq	ILMN_237738	ILMN_237738	TAAR8B	NM_001010837.1	NM_001010837.1		382348	58082070	NM_001010837.1	Taar8b	NP_001010837.1	ILMN_2973616	007610082	S	204	TCTCATCGCCTCTCTGGCCAGCGCTGACTTCTTGGTGGGCATCTCTGTGA	10	-	23811847-23811896	10qA4	Mus musculus trace amine-associated receptor 8B (Taar8b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm1149	Gm1149
Mus musculus	RefSeq	ILMN_201277	ILMN_237738	TAAR8B	NM_001010837.1	NM_001010837.1		382348	58082070	NM_001010837.1	Taar8b	NP_001010837.1	ILMN_1218142	004830424	S	830	TTGACTCATTGGTTGATGCTTTCGTGGGCTTCATTACTCCTGCCTATGTC	10	-	23811221-23811270	10qA4	Mus musculus trace amine-associated receptor 8B (Taar8b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]	Gm1149	Gm1149
Mus musculus	Riken	ILMN_203863	ILMN_203863	A630010I05RIK	ri|A630010I05|PX00144I20|AK041448|1263					AK041448	A630010I05Rik		ILMN_1213052	000240703	S	949	TCCAGGTTTTTTCCTCCTGGGCCCTGCTCCCGGAATGACTACTCTGAGAC										
Mus musculus	RefSeq	ILMN_200827	ILMN_200827	LOC382223	XM_356336.1	XM_356336.1			38086411	XM_356336.1	LOC382223		ILMN_2540144	007560240	S	677	AAGAAACTAGGAACCCAGAGCCCCTCATCACCGGACTGCCTCCAAGCTGG										
Mus musculus	RefSeq	ILMN_194950	ILMN_194950	ZBTB3	NM_133759.1	NM_133759.1		75291	29789326	NM_133759.1	Zbtb3	NP_598520.1	ILMN_2924299	005270136	S	1674	GCTAGATGGCTACAGAGAAGGCTGGAAGCACCTCATCACTCCAGGGTGGC	19	+	8871672-8871721	19qA	Mus musculus zinc finger and BTB domain containing 3 (Zbtb3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4930563M09Rik	4930563M09Rik
Mus musculus	RefSeq	ILMN_214134	ILMN_214134	HIGD1A	NM_019814.3	NM_019814.3		56295	142361374	NM_019814.3	Higd1a	NP_062788.1	ILMN_2644630	002190326	S	1418	TGAAATCCATGTCCAACCCAAACTAATATTCCATAGAGACAAGGTGTCAT	9	-	121757709-121757758	9qF4	Mus musculus HIG1 domain family, member 1A (Higd1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2210020B17Rik; AW049839; AI303276; HIMP1; 7420700H20Rik; Hig1	2210020B17Rik; AW049839; AI303276; HIMP1; 7420700H20Rik; Hig1
Mus musculus	RefSeq	ILMN_211212	ILMN_211212	A630047E20RIK	NM_173032.2	NM_173032.2		271981	141801858	NM_173032.2	A630047E20Rik	NP_766620.1	ILMN_2613656	006130494	S	2867	TACTACAAAATTTAAAGTTGTCTCAGCAGTATATAACTATGCCTGCCAAA	3	+	132459483-132459532	3qG3	Mus musculus RIKEN cDNA A630047E20 gene (A630047E20Rik), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence RCA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence RCA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence RCA]	9430001M19	9430001M19
Mus musculus	RefSeq	ILMN_196794	ILMN_221726	BC031781	NM_145943.1	NM_145943.1		208768	22122372	NM_145943.1	BC031781	NP_666055.1	ILMN_2525829	002370437	S	244	TCGTGGGGGGAAAGGAGGTTTTGGGTCTATGCTTCGAGCACTTGGTGCAC	1	+	182786035-182786051:182788254-182788286	1qH4	Mus musculus cDNA sequence BC031781 (BC031781), mRNA.				MGC30618	MGC30618
Mus musculus	RefSeq	ILMN_221726	ILMN_221726	BC031781	NM_145943.1	NM_145943.1		208768	22122372	NM_145943.1	BC031781	NP_666055.1	ILMN_2894040	002340438	S	3076	CTTTGGGGTGTTTTCAGGTGTGCCTAAATGTCTACTCTTCTGCTCTGGAG	1	+	182798131-182798180	1qH4	Mus musculus cDNA sequence BC031781 (BC031781), mRNA.				MGC30618	MGC30618
Mus musculus	RefSeq	ILMN_210796	ILMN_210796	GPR180	NM_021434.4	NM_021434.4		58245	146134909	NM_021434.4	Gpr180	NP_067409.2	ILMN_3161518	005260082	S	2207	CAGGACTGTTAGTTTCCGTCATCAACCTACCCACGAATTCCTGCCCAAGG				14qE4	Mus musculus G protein-coupled receptor 180 (Gpr180), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AB041545; E130016I23Rik; Itr	AB041545; E130016I23Rik; Itr
Mus musculus	RefSeq	ILMN_184632	ILMN_317234	LOC100043564	XM_001480904.1	XM_001480904.1		100043564	149267504	XM_001480904.1	LOC100043564	XP_001480954.1	ILMN_2420246	000010129	S	1372	ACATTCTTGCTACATTGGGATGAAGATAGAATCCCTAATTAAGTTCTATA	16	-	24379526-24379575	16qB1	PREDICTED: Mus musculus similar to BMP2 inducible kinase (LOC100043564), mRNA.					
Mus musculus	RefSeq	ILMN_196870	ILMN_313713	LOC100045840	XM_001475011.1	XM_001475011.1		100045840	149233671	XM_001475011.1	LOC100045840	XP_001475061.1	ILMN_1212937	004120093	S	183	AGAAATCAGGTGTGCTGGCTGCTCCTAACTCTCAGAAGAATGGGGAAGGG					PREDICTED: Mus musculus hypothetical protein LOC100045840 (LOC100045840), mRNA.					
Mus musculus	MEEBO	ILMN_196300	ILMN_196300	PSMF1	scl4716.1.1_69				21450256	NM_144889	Psmf1		ILMN_2523465	003940341	S	16	GCCAACAGGGCAAGCTACTGTGGACTCTGCTCTGCATGGTCTTGGTCAAA						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]				
Mus musculus	MEEBO	ILMN_196300	ILMN_196300	PSMF1	scl4716.1.1_69				21450256	NM_144889	Psmf1		ILMN_1233929	007560129	S	1201	CCCTCCACCCGATGCAGTCGCGGTCACAGCGCTATAAGAACAGAACGCAT						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]				
Mus musculus	Riken	ILMN_202298	ILMN_202298	4933408J17RIK	ri|4933408J17|PX00020I22|AK016739|1862					AK016739	4933408J17Rik		ILMN_1243603	000450112	S	1703	GGCACCTCCGTTCTAGTCACACAGCCAATGAACAGAATCCCCTCTGGGTC										
Mus musculus	RefSeq	ILMN_186258	ILMN_186258	USP18	NM_011909.1	NM_011909.1		24110	6755926	NM_011909.1	Usp18	NP_036039.1	ILMN_3131679	001580528	A	1550	GAGACAGGGACCAGTGGGAGATCATCGGTTCATGGGATCTCTCTCCTGAG	6	+	121220764-121220813	6qF1	Mus musculus ubiquitin specific peptidase 18 (Usp18), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent addition to a protein of ISG15, a ubiquitin-like protein [goid 32020] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of ISG15, a small ubiquitin-related modifier, from previously modified substrates [goid 19785] [evidence IMP]	UBP43; Ubp15; 1110058H21Rik; AW047653	UBP43; Ubp15; 1110058H21Rik; AW047653
Mus musculus	RefSeq	ILMN_186258	ILMN_186258	USP18	NM_011909.1	NM_011909.1		24110	6755926	NM_011909.1	Usp18	NP_036039.1	ILMN_3054914	004610139	I	108	CCGTGCTTGAGAGGGTCATTTGTCTCCGGCTTGTGTAGACTCTGCCTGGA	6	+	121202335-121202384	6qF1	Mus musculus ubiquitin specific peptidase 18 (Usp18), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent addition to a protein of ISG15, a ubiquitin-like protein [goid 32020] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of ISG15, a small ubiquitin-related modifier, from previously modified substrates [goid 19785] [evidence IMP]	UBP43; Ubp15; 1110058H21Rik; AW047653	UBP43; Ubp15; 1110058H21Rik; AW047653
Mus musculus	MEEBO	ILMN_186922	ILMN_186922	2810050O03RIK	scl072678.1_275						2810050O03Rik		ILMN_2439645	007650021	S	2	GTCAGCTGGAGTGGGGGACTCCATGCCAGAGGGATGGTTTGGTATTATGT										
Mus musculus	RefSeq	ILMN_217413	ILMN_325608	LOC100045628	XR_031850.1	XR_031850.1		100045628	149272076	XR_031850.1	LOC100045628		ILMN_1235366	001400035	S	3822	CGAACAAAATTTCAGAGCTTGAGACCTGGGACATTTAAATCCTCAAGGGG					PREDICTED: Mus musculus similar to X-linked PEST-containing transporter (LOC100045628), misc RNA.					
Mus musculus	MEEBO	ILMN_189041	ILMN_189041	MYOHD1	scl39801.4.135_9				31560256	NM_025414	Myohd1		ILMN_1248602	001090241	S	2600	TGCCTCTAGAATTTTGGCTGGGGGAGAACTTGCATATAGTTTACTAAGGG										
Mus musculus	MEEBO	ILMN_223867	ILMN_223867	2310002B14RIK	scl069533.1_324				21312309	NM_027105	2310002B14Rik		ILMN_2770748	002510228	S	901	CTGCTAGTGTTGCTTAGGCAGGGAACTGTGTACCTGATATGATCTGCACT										
Mus musculus	RefSeq	ILMN_219484	ILMN_219484	RASSF8	NM_027760.2	NM_027760.2		71323	133892929	NM_027760.2	Rassf8	NP_082036.1	ILMN_1235546	004570220	S	1664	TGTAATTGATTAATGTATGAATGTTGCTCTCTAATGTTTTATTAATACTT	6	+	145766035-145766084	6qG3	Mus musculus Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 (Rassf8), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		MGC144732; MGC144731; mHoj-1; AW123240; AA815821; 5133400D11Rik; Hoj1	MGC144732; MGC144731; mHoj-1; AW123240; AA815821; 5133400D11Rik; Hoj1
Mus musculus	MEEBO	ILMN_221888	ILMN_221888	2310076O14RIK	scl47776.8_377				51829785	XM_484487	2310076O14Rik		ILMN_2741639	005420356	S	1975	CCCAGGGACCCTCCGTCCTAGTGCACTGTAGAATTGAGCCCCTTATCTCT										
Mus musculus	RefSeq	ILMN_220925	ILMN_220925	ACTR1A	NM_016860.1	NM_016860.1		54130	8392846	NM_016860.1	Actr1a	NP_058556.1	ILMN_2728697	003310181	S	2682	CTCGCGAAGCCACTTTGCCTGGTGGGGCCCAGTGTACTTAAATAAAGTCG	19	-	46451314-46451363	19qC3	Mus musculus ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) (Actr1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	alpha-Arp1; Arp1	alpha-Arp1; Arp1
Mus musculus	RefSeq	ILMN_214435	ILMN_214435	OPRS1	NM_011014.2	NM_011014.2		18391	133892605	NM_011014.2	Oprs1	NP_035144.1	ILMN_1238081	006650520	S	435	CTGACACCATCATCTCTGGCACCTTCCACCAATGGAAAGAGGGCACCACG	4	-	41687444-41687493	4qA5	Mus musculus opioid receptor, sigma 1 (Oprs1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ergosterol, (22E)-ergosta-5,7,22-trien-3-beta-ol, a sterol found in ergot, yeast and moulds [goid 6696] [evidence IEA]	Catalysis of the reaction which results in unsaturation at C-7 in the B ring of sterols [goid 247] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	AL024364; mSigmaR1	AL024364; mSigmaR1
Mus musculus	RefSeq	ILMN_214435	ILMN_214435	OPRS1	NM_011014.2	NM_011014.2		18391	133892605	NM_011014.2	Oprs1	NP_035144.1	ILMN_2677170	001990044	S	1446	CCTGGAGAAGTAAGCCGGGGTCCAAGGAGCCACCCCATTCCAAAAGAAGC	4	-	41685464-41685513	4qA5	Mus musculus opioid receptor, sigma 1 (Oprs1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ergosterol, (22E)-ergosta-5,7,22-trien-3-beta-ol, a sterol found in ergot, yeast and moulds [goid 6696] [evidence IEA]	Catalysis of the reaction which results in unsaturation at C-7 in the B ring of sterols [goid 247] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	AL024364; mSigmaR1	AL024364; mSigmaR1
Mus musculus	RefSeq	ILMN_195688	ILMN_257722	HS3ST2	NM_001081327.1	NM_001081327.1		195646	124486752	NM_001081327.1	Hs3st2	NP_001074796.1	ILMN_1254744	001450561	S	1204	TGGAAAGCTGGCTGCGGTACTTCCCACTGGCCCAGATCCACTTCGTCAGT	7	+	128644216-128644265	7qF2	Mus musculus heparan sulfate (glucosamine) 3-O-sulfotransferase 2 (Hs3st2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate; modifies selected glucosamine residues preceded by GlcA2S [goid 33871] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A830061E14Rik; 6430516N12Rik; AW491345	A830061E14Rik; 6430516N12Rik; AW491345
Mus musculus	RefSeq	ILMN_210849	ILMN_257722	HS3ST2	NM_001081327.1	NM_001081327.1		195646	124486752	NM_001081327.1	Hs3st2	NP_001074796.1	ILMN_2609831	006200270	S	853	TGCGGGCCTTGGGCACTGAGCCCCACTTCTTCGACAGGAACTACGGACGA	7	+	128536662-128536711	7qF2	Mus musculus heparan sulfate (glucosamine) 3-O-sulfotransferase 2 (Hs3st2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate; modifies selected glucosamine residues preceded by GlcA2S [goid 33871] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A830061E14Rik; 6430516N12Rik; AW491345	A830061E14Rik; 6430516N12Rik; AW491345
Mus musculus	RefSeq	ILMN_197313	ILMN_323631	LOC218501	XR_031538.1	XR_031538.1		218501	149264641	XR_031538.1	LOC218501		ILMN_1235485	002850768	S	995	CAGAATACCCCGATAAATAGCATGGCGAGCACCCAGATGACTACCCTCGA	13	+	99384361-99384410	13qD1	PREDICTED: Mus musculus similar to calponin 3, acidic (LOC218501), misc RNA.					
Mus musculus	Riken	ILMN_206958	ILMN_206958	PFTK1	ri|E130006M03|PX00207B11|AK087398|3067					AK087398	Pftk1		ILMN_1237125	003800687	S	2468	CTGAGCGAGTGTCTCTGTACTGCGTGTGCTCCTGAGGGTAGTATAGCTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]		
Mus musculus	Riken	ILMN_205220	ILMN_205220	E230024B12RIK	ri|E230024B12|PX00209D12|AK087605|2166					AK087605	E230024B12Rik		ILMN_1253191	002490243	S	2036	AAGCACCGCCATCTTGGCATTTTGCTAAACCTCCTACTTCCTTGGGCGCC										
Mus musculus	Riken	ILMN_203666	ILMN_203666	9430096L22RIK	ri|9430096L22|PX00111A12|AK035179|2413					AK035179	9430096L22Rik		ILMN_2559046	003190747	S	1535	TTGTGGACAAACAGGAGTCTGCAGGGCCATCAGGCATGGGCAGGAACTCC										
Mus musculus	RefSeq	ILMN_213392	ILMN_238515	TOM1L1	NM_028011.2	NM_028011.2		71943	141803263	NM_028011.2	Tom1l1	NP_082287.1	ILMN_1249959	006650093	S	565	CGACCGACATCTGTCCCCACTGCACCTGCACTTTCTTCTATAATTGCTCC	11	-	90534180-90534229	11qD	Mus musculus target of myb1-like 1 (chicken) (Tom1l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence TAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [evidence IDA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	C80573; Srcasm; 2310045L10Rik	C80573; Srcasm; 2310045L10Rik
Mus musculus	MEEBO	ILMN_193266	ILMN_193266	B230369F24RIK	scl15860.2.1_0				51705420	XM_484944	B230369F24Rik		ILMN_1219581	007560619	S	1	TTAGTGGGCTTGAGATACATCTTCTGCTTTCGTGAATTTGAGAGTCACTA										
Mus musculus	RefSeq	ILMN_196991	ILMN_196991	LOC329240	XM_287038.1	XM_287038.1			28482107	XM_287038.1	LOC329240		ILMN_2526515	003290709	S	637	GGCTCCCAGTCTGTGGACACAATTGCCTCTTTTAGGTTTGCAAGGCTCCC										
Mus musculus	RefSeq	ILMN_186567	ILMN_186567	ZFP367	NM_175494.4	NM_175494.4		238673	146198865	NM_175494.4	Zfp367	NP_780703.1	ILMN_1257178	005900605	S	2706	GCCTTGGAGAGTGGAGGGAAGAAATGTCTTGAGAAGCGCCAATGTGAAGC				13qB3	Mus musculus zinc finger protein 367 (Zfp367), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ZFF29a; ZFF29b; 8030486J21Rik	ZFF29a; ZFF29b; 8030486J21Rik
Mus musculus	RefSeq	ILMN_197029	ILMN_258020	LOC269134	XR_003604.1	XR_003604.1		269134	94365751	XR_003604.1	LOC269134		ILMN_2526652	003190435	S	1296	GCCAGGGATTCAGTGCGACCCCTTGCAAAGAGCCATGTATGCGTTTCCTC				1qH2.1	PREDICTED: Mus musculus similar to glutamic pyruvate transaminase (alanine aminotransferase) 2 (LOC269134), mRNA.					
Mus musculus	RefSeq	ILMN_219386	ILMN_319459	LOC100048796	XM_001481256.1	XM_001481256.1		100048796	149274394	XM_001481256.1	LOC100048796	XP_001481306.1	ILMN_2708115	001570575	S	74	GCCCCTACTGCGTTCCGTGCTATGACAACACCTTCGCCAACACCTGTGCT					PREDICTED: Mus musculus similar to four and a half LIM domains 3 (LOC100048796), mRNA.					
Mus musculus	MEEBO	ILMN_213342	ILMN_213342	GPR110	scl50709.16.1_0				19527001	NM_133776	Gpr110		ILMN_2771563	005340750	S	3398	CAGTAGGTGACTTCAGTGATTCAACTCTGCCTCCTTTATTCCAAATTAAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213252	ILMN_213252	HERC3	NM_028705.2	NM_028705.2		73998	27777641	NM_028705.2	Herc3	NP_082981.2	ILMN_1221028	002480243	S	4361	CAGCAGGGGGATTATGTTAAGTCAAATGCGTGTGTCTCAAAAGTGACATG	6	+	58870011-58870060	6qB3	Mus musculus hect domain and RLD 3 (Herc3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730409F18Rik; mKIAA0032; MGC30404; AI646603	5730409F18Rik; mKIAA0032; MGC30404; AI646603
Mus musculus	RefSeq	ILMN_213252	ILMN_213252	HERC3	NM_028705.2	NM_028705.2		73998	27777641	NM_028705.2	Herc3	NP_082981.2	ILMN_2635218	004070647	S	2540	CCCGTTGGCTCTCTACAAGAAGTTACTGAATGTAAAGCCCAGCTTGGAAG	6	+	58840149-58840198	6qB3	Mus musculus hect domain and RLD 3 (Herc3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730409F18Rik; mKIAA0032; MGC30404; AI646603	5730409F18Rik; mKIAA0032; MGC30404; AI646603
Mus musculus	RefSeq	ILMN_198793	ILMN_198793	LOC233437	XM_145883.3	XM_145883.3			38087712	XM_145883.3	LOC233437		ILMN_1245187	001260082	S	2004	GGATACAGGAAAGAACCGTGCTCCAATGCTGGTGCCCGATAGAGGCAAGC										
Mus musculus	RefSeq	ILMN_196332	ILMN_196332	4632419I22RIK	NM_175205.2	NM_175205.2			31340806	NM_175205.2	4632419I22Rik		ILMN_1256618	004230301	S	3646	AGGGTGGACCAGTGGTTAAGAGCACTTGCTTCTCTTGTACAGGACCCAGG										
Mus musculus	MEEBO	ILMN_193443	ILMN_193443	SFMBT2	scl21295.26.802_230				31341439	NM_177386	Sfmbt2		ILMN_2659651	006290491	S	1768	ACGCTTCCCTAAGTAGCCAGCTAGAGAGGCACTCTTCACATGCCAAGAAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]			
Mus musculus	RefSeq	ILMN_213526	ILMN_213526	TCHP	NM_029992.2	NM_029992.2		77832	148222455	NM_029992.2	Tchp	NP_084268.2	ILMN_2637930	006450661	S	2655	GGTGTTGTTCCTGGTTATGGGAACCGAGAGTTTGCCTGGGCTCTGAGGGC				5qF	Mus musculus trichoplein, keratin filament binding (Tchp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]			A930031F18Rik; AV279199	A930031F18Rik; AV279199
Mus musculus	MEEBO	ILMN_221656	ILMN_221656	2010007L18RIK	scl0066432.1_29	XM_134478.2			38089591	XM_134478.2	2010007L18Rik		ILMN_2738548	006450465	S	1437	CACCTTTGGCAGTGGTACCAAGGAACAGTATGTATGAATGTGATGATCTT										
Mus musculus	RefSeq	ILMN_241846	ILMN_241846	CACNA1B	NM_001042528.1	NM_001042528.1		12287	110225367	NM_001042528.1	Cacna1b	NP_001035993.1	ILMN_3033572	001740722	I	5454	TGTGTGGGCTAATCTGCCCCAGAAGACTCTGGACTTACTGGTACCACCCC	2	-	24473780-24473829	2qA3	Mus musculus calcium channel, voltage-dependent, N type, alpha 1B subunit (Cacna1b), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]	AW060892; alpha(1B); AW822256; Cav2.2; Cchn1a; AW050276	AW060892; alpha(1B); AW822256; Cav2.2; Cchn1a; AW050276
Mus musculus	RefSeq	ILMN_191684	ILMN_241846	CACNA1B	NM_001042528.1	NM_001042528.1		12287	110225367	NM_001042528.1	Cacna1b	NP_001035993.1	ILMN_1241072	006760626	S	5433	GCTGAGAAAAGAGATCTCTTCTGTGTGGGCTAATCTGCCCCAGAAGACTC	2	-	24473801-24473850	2qA3	Mus musculus calcium channel, voltage-dependent, N type, alpha 1B subunit (Cacna1b), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]	AW060892; alpha(1B); AW822256; Cav2.2; Cchn1a; AW050276	AW060892; alpha(1B); AW822256; Cav2.2; Cchn1a; AW050276
Mus musculus	RefSeq	ILMN_241846	ILMN_241846	CACNA1B	NM_001042528.1	NM_001042528.1		12287	110225367	NM_001042528.1	Cacna1b	NP_001035993.1	ILMN_3107273	004150408	A	6661	TCTGAACACAATGCCCTGCTCCAGAAAGAGCCCCTGAGCCAGCCTCTAGC	2	-	24462363-24462412	2qA3	Mus musculus calcium channel, voltage-dependent, N type, alpha 1B subunit (Cacna1b), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]	AW060892; alpha(1B); AW822256; Cav2.2; Cchn1a; AW050276	AW060892; alpha(1B); AW822256; Cav2.2; Cchn1a; AW050276
Mus musculus	RefSeq	ILMN_218233	ILMN_254536	PPP1R12B	NM_001081307.1	NM_001081307.1		329251	124486802	NM_001081307.1	Ppp1r12b	NP_001074776.1	ILMN_1251203	006280228	S	3026	TCAAACCTTGAAGCAGATGAACGAACAACTGCAGGCTGAGAACAGGGCCC	1	-	136662581-136662630	1qE4	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 12B (Ppp1r12b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			1810037O03Rik; B230333M12; AI132431; A330043L12	1810037O03Rik; B230333M12; AI132431; A330043L12
Mus musculus	RefSeq	ILMN_204083	ILMN_254536	PPP1R12B	NM_001081307.1	NM_001081307.1		329251	124486802	NM_001081307.1	Ppp1r12b	NP_001074776.1	ILMN_1229556	005050673	S	834	GCCAAGGGTTACTCTGAAGTCCTCAGGCTTCTCATTCAGGCTGGCTATGA	1	-	136788855-136788879:136789927-136789951	1qE4	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 12B (Ppp1r12b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			1810037O03Rik; B230333M12; AI132431; A330043L12	1810037O03Rik; B230333M12; AI132431; A330043L12
Mus musculus	RefSeq	ILMN_200600	ILMN_200600	LOC383389	XM_357025.1	XM_357025.1			38084032	XM_357025.1	LOC383389		ILMN_1241126	006250189	S	637	GGCAGACAGATAGGGAAAGAGACCTCAGGTGGTGCAAACGCCCCAGCTCT										
Mus musculus	RefSeq	ILMN_210434	ILMN_210434	MAN2A1	NM_008549.1	NM_008549.1		17158	6678789	NM_008549.1	Man2a1	NP_032575.1	ILMN_1239578	003400050	S	5607	TGCTTTGGGTTATGGTCAGAAACTGGTTTCTCTGGCACACGTGGGCAGTC	17	+	65103979-65104028	17qE1.1	Mus musculus mannosidase 2, alpha 1 (Man2a1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IGI]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vacuole [goid 7033] [evidence IGI]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IGI]; The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any N-glycosyl bond [goid 16799] [evidence IDA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,3- and 1,6-linked alpha-D-mannose residues in the mannosyl-oligosaccharide Man(5)(GlcNAc)(3) [goid 4572] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Mana2; Mana-2; Map-2	Mana2; Mana-2; Map-2
Mus musculus	RefSeq	ILMN_218640	ILMN_218640	FMR1	NM_008031.2	NM_008031.2		14265	51036612	NM_008031.2	Fmr1	NP_032057.2	ILMN_1229462	003360717	S	4295	CATGTTTTTAAAATCTTATTAAAGTTTCAAAAATCTGAAGATTGTTTATC	X	+	65971038-65971087	XqA7.1	Mus musculus fragile X mental retardation syndrome 1 homolog (Fmr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fmr-1; FMRP	Fmr-1; FMRP
Mus musculus	RefSeq	ILMN_212781	ILMN_212781	ERH	NM_007951.1	NM_007951.1		13877	6679684	NM_007951.1	Erh	NP_031977.1	ILMN_2919786	001300110	S	610	CTGTCGAGTCTGCTTTTAAGCAGTGAGCGCACTAACCCTTTGTGGGGGTG	12	-	81552952-81553001	12qD1	Mus musculus enhancer of rudimentary homolog (Drosophila) (Erh), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Prei1; Mer; MGC130271; MGC103398; MGC130272	Prei1; Mer; MGC130271; MGC103398; MGC130272
Mus musculus	Riken	ILMN_207352	ILMN_207352	9530095P18RIK	ri|9530095P18|PX00654M17|AK079301|2730					AK079301	9530095P18Rik		ILMN_2586966	001300176	S	2333	GAATGGTTACCTTACTAGCAGGTGGTTATACCAAATGCAAGGTGGAAAGC										
Mus musculus	RefSeq	ILMN_200711	ILMN_200711	APOLD1	XM_355823.3	XM_355823.3		381823	94378168	XM_355823.3	Apold1	XP_355823.1	ILMN_1222453	002630746	S	620	GATTCAGAAACTGTCAGAGAGCCTGGAGTCGTGCACTGGCGCCCTGGATG	6	+	134934190-134934239	6qG1	PREDICTED: Mus musculus apolipoprotein L domain containing 1 (Apold1), mRNA.					
Mus musculus	RefSeq	ILMN_212065	ILMN_212065	ADRA1D	NM_013460.4	NM_013460.4		11550	110347546	NM_013460.4	Adra1d	NP_038488.4	ILMN_1255775	000130364	S	820	CCGGATGAGCGTTTCTGCGGCATCACCGAGGAGGTGGGCTATGCGATCTT	2	-	131387152-131387201	2qF1	Mus musculus adrenergic receptor, alpha 1d (Adra1d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that decreases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the baroreceptor response to increased blood pressure [goid 1986] [evidence IMP]; A process that results in a decrease in the diameter of an artery during the norepinephrine-epinephrine response to decreased blood pressure [goid 1994] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IDA]	Spr8; Adra1a; Adra-1; [a]1d; Adra1; alpha1D-AR; Gpcr8	Spr8; Adra1a; Adra-1; [a]1d; Adra1; alpha1D-AR; Gpcr8
Mus musculus	RefSeq	ILMN_212065	ILMN_212065	ADRA1D	NM_013460.4	NM_013460.4		11550	110347546	NM_013460.4	Adra1d	NP_038488.4	ILMN_2651797	004230286	S	1512	AGACACGCCGGAGGCGCAGGCTTCGGTCTCCGGCCGTCGAAAGCCAGCCT	2	-	131371925-131371974	2qF1	Mus musculus adrenergic receptor, alpha 1d (Adra1d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that decreases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the baroreceptor response to increased blood pressure [goid 1986] [evidence IMP]; A process that results in a decrease in the diameter of an artery during the norepinephrine-epinephrine response to decreased blood pressure [goid 1994] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IDA]	Spr8; Adra1a; Adra-1; [a]1d; Adra1; alpha1D-AR; Gpcr8	Spr8; Adra1a; Adra-1; [a]1d; Adra1; alpha1D-AR; Gpcr8
Mus musculus	RefSeq	ILMN_211694	ILMN_211694	CHN1	NM_175752.2	NM_175752.2		108699	142371256	NM_175752.2	Chn1	NP_786928.1	ILMN_2618597	004570646	S	3533	ATGCCAGACCTCAAAATACCTTTTTATTATCCTAAACTATCAGATTAATT	2	-	73448939-73448988	2qC3	Mus musculus chimerin (chimaerin) 1 (Chn1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700112L09Rik; ARHGAP2; AI413815; 2900046J01Rik; 0710001E19Rik; 0610007I19Rik	1700112L09Rik; ARHGAP2; AI413815; 2900046J01Rik; 0710001E19Rik; 0610007I19Rik
Mus musculus	Riken	ILMN_204342	ILMN_204342	A930019E22RIK	ri|A930019E22|PX00066B14|AK044530|2340					AK044530	A930019E22Rik		ILMN_2564238	006040546	S	1716	GTACATGCGTGACAGGAAGGAGCAGGTAACAAGGCCCCTGCTTAAAGCTC										
Mus musculus	RefSeq	ILMN_253065	ILMN_253065	AGAP1	NM_178119.3	NM_178119.3		347722	80978935	NM_178119.3	Agap1	NP_835220.1	ILMN_3021227	003830300	I	1969	TCAGATGGCAAGCGGCATCAGCCTGGTCTCCTTCAACAGCCGACCCGATG	1	+	91662906-91662955	1qD	Mus musculus ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 (Agap1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	Ggap1; R75364; mKIAA1099	Ggap1; R75364; mKIAA1099
Mus musculus	MEEBO	ILMN_194939	ILMN_194939	D930005L05RIK	scl0319415.3_166				51765544	XM_488552	D930005L05Rik		ILMN_2511069	001050136	S	4	CTACCCACTGAAAGCAAGCCTCCACATGTAAGTCTTGAGGGGACACATTC										
Mus musculus	RefSeq	ILMN_247306	ILMN_247306	OLFR1386	NM_001011741.1	NM_001011741.1		257888	58801275	NM_001011741.1	Olfr1386	NP_001011741.1	ILMN_2962701	004780706	S	774	CTTGCAACCCAAGAGCAGTTATTCTGAAAGCAAGGGGAAGTTTGTGGCCC	11	+	49284428-49284477	11qB1.2	Mus musculus olfactory receptor 1386 (Olfr1386), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-50	MOR256-50
Mus musculus	Riken	ILMN_202953	ILMN_202953	A930026F04RIK	ri|A930026F04|PX00066H11|AK044600|1516					AK044600	A930026F04Rik		ILMN_1238156	003060324	S	1056	TGACACCCACTGGAAAAGCCTGTGGCGTCCCTCACTGTCAATCCCCCAGG										
Mus musculus	Riken	ILMN_204091	ILMN_204091	B230320P20RIK	ri|B230320P20|PX00159F21|AK045903|968					AK045903	B230320P20Rik		ILMN_1240483	004120730	S	679	CAATGGTTGAGAGTTTTGCTTCAGCTGCGGAGGGAGACGGAAGGGCCACC										
Mus musculus	RefSeq	ILMN_219676	ILMN_219676	CNNM2	NM_033569.2	NM_033569.2		94219	118130766	NM_033569.2	Cnnm2	NP_291047.1	ILMN_1226325	006100520	S	2572	CCTTTCCTCTGTGCCCGGTGGGTGTCGCTGTCGAACTTGATGGATGAATG	19	+	46953000-46953049	19qC3	Mus musculus cyclin M2 (Cnnm2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FLJ20064; Acdp2; AU015877; AW048635	FLJ20064; Acdp2; AU015877; AW048635
Mus musculus	RefSeq	ILMN_207492	ILMN_309970	LOC100044622	XM_001472728.1	XM_001472728.1		100044622	149261234	XM_001472728.1	LOC100044622	XP_001472778.1	ILMN_2587844	002490021	I	792	CTTGCCGCCATTGACACGCACAGATACAACCCCAAGAAAGGCAGGGTCCT					PREDICTED: Mus musculus similar to TBP-associated factor 4 (LOC100044622), mRNA.					
Mus musculus	RefSeq	ILMN_191930	ILMN_329477	LOC100046552	XM_001476407.1	XM_001476407.1		100046552	149255587	XM_001476407.1	LOC100046552	XP_001476457.1	ILMN_2483493	001770767	S	282	CATCAGCAGCCTGCAGCCTGAAGACATTGCCACTTACTACTGTCAACAGG					PREDICTED: Mus musculus similar to Unknown (protein for MGC:103328) (LOC100046552), mRNA.					
Mus musculus	RefSeq	ILMN_213185	ILMN_213185	COX7B2	NM_030052.3	NM_030052.3		78174	114158709	NM_030052.3	Cox7b2	NP_084328.1	ILMN_2634537	002510672	S	269	CGGCAATATGATGCTAATTAGTGGGACTATTTTCTGTTTAGCTGGATATA	5	-	71834286-71834335	5qC3.1-qC3.2	Mus musculus cytochrome c oxidase subunit VIIb2 (Cox7b2), mRNA.			Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]	4930503B16Rik	4930503B16Rik
Mus musculus	MEEBO	ILMN_187332	ILMN_187332	MRPS18B	scl50759.5.1_46				23956151	NM_025878	Mrps18b		ILMN_1226334	004120438	S	133	CGCTTCCCGTTTCCCCATATGAGAGCGAGCCTTGGAAGTACCTGGATTCA						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	Riken	ILMN_202098	ILMN_202098	2810006K23RIK	ri|2810006K23|ZX00064L05|AK012682|484					AK012682	2810006K23Rik		ILMN_2546984	000050209	S	429	AATGGTGAAAACAGCCCCGTTCACAAAGAGAAGCTCGAGGCTGAGAGGAG							The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code) [goid 6415] [evidence IEA]	Involved in catalyzing the release of a nascent polypeptide chain from a ribosome [goid 3747] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195867	ILMN_313057	LOC100040244	XM_001473727.1	XM_001473727.1		100040244	149271669	XM_001473727.1	LOC100040244	XP_001473777.1	ILMN_1260579	004560184	I	2958	CAGTCTCAGACACTAGGGACTGCCACCATGTTGAGCACAGTTGATGTGGA	X	+	66077221-66077270	XqA7.1	PREDICTED: Mus musculus similar to phosphoserine/threonine/tyrosine interaction protein (LOC100040244), mRNA.					
Mus musculus	Riken	ILMN_206101	ILMN_206101	1110031I01RIK	ri|1110031I01|ZA00008G05|AK027948|485					AK027948	1110031I01Rik		ILMN_2577558	007320762	S	226	CAGAGTAAGATCCTGGAGGCAATAACGGGAGCAGAGGCGGGAGAGGAGTG										
Mus musculus	RefSeq	ILMN_213374	ILMN_213374	OSR1	NM_011859.2	NM_011859.2		23967	31981366	NM_011859.2	Osr1	NP_035989.1	ILMN_1259787	004250241	S	1175	TGCGGGCAGCGGGAGGGGCTTTCGGGATCTTCCTTCCACAGCAACAAAAT	12	+	9587525-9587574	12qA1.1	Mus musculus odd-skipped related 1 (Drosophila) (Osr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones [goid 8406] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process whose specific outcome is the progression of the intermediate mesoderm over time, from its formation to the mature structure. The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads [goid 48389] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Osr; Odd1	Osr; Odd1
Mus musculus	RefSeq	ILMN_220378	ILMN_220378	SLC2A4	NM_009204.2	NM_009204.2		20528	118026924	NM_009204.2	Slc2a4	NP_033230.2	ILMN_1222333	003840673	S	1871	GGAGGGGTGGTCCATGTACCCCTCATTCCCCCTGTGTGATTCTTTTGGAT	11	-	69758912-69758960:69759065-69759065	11qB3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 4 (Slc2a4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence ISO]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence TAS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISO]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence TAS]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence ISO]	Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence TAS]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+, in response to a stimulus by insulin. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 5360] [evidence TAS]	Glut4; Glut-4	Glut4; Glut-4
Mus musculus	RefSeq	ILMN_191465	ILMN_191465	U2AF2	NM_133671.1	NM_133671.1		22185	19526823	NM_133671.1	U2af2	NP_598432.1	ILMN_2479300	003440431	S	677	CCTGCATTTTTTCCTACTATTGACCTCTACACCCCTGACCCATATTCCAC	7	+	5020857-5020906	7qA1	Mus musculus U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 (U2af2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC118033; 65kDa	MGC118033; 65kDa
Mus musculus	RefSeq	ILMN_191465	ILMN_191465	U2AF2	NM_133671.1	NM_133671.1		22185	19526823	NM_133671.1	U2af2	NP_598432.1	ILMN_2496310	002750528	S	2164	ATTTTATGGCCAAACTATTTTGAATTTTGTTGTCTGGCCCTCAGTGCCCT	7	+	5031287-5031336	7qA1	Mus musculus U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 (U2af2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC118033; 65kDa	MGC118033; 65kDa
Mus musculus	RefSeq	ILMN_191465	ILMN_191465	U2AF2	NM_133671.1	NM_133671.1		22185	19526823	NM_133671.1	U2af2	NP_598432.1	ILMN_2509142	004120528	S	684	TTTTTCCTACTATTGACCTCTACACCCCTGACCCATATTCCACTGTCCCT	7	+	5020864-5020913	7qA1	Mus musculus U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 (U2af2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC118033; 65kDa	MGC118033; 65kDa
Mus musculus	MEEBO	ILMN_223314	ILMN_223314	MRPS23	scl064656.5_1	NM_024174.4			31981265	NM_024174.4	Mrps23		ILMN_2762361	004180056	S	899	CCCTCGGCCGTGTCTGCGGGTGGTGTTTGTACTTTTTTTCTGTAGAGCTG						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]		The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]		
Mus musculus	RefSeq	ILMN_200027	ILMN_200027	LOC383125	XM_356890.1	XM_356890.1			38079905	XM_356890.1	LOC383125		ILMN_1230375	005870762	S	538	GGAACCAGAGTGGAACCAGTGACCCTCGGAGACTTTACCTCTTGGCTTAC										
Mus musculus	Riken	ILMN_203196	ILMN_203196	STATIP1	ri|A930034F08|PX00067F12|AK044699|2530					AK044699	Statip1		ILMN_2555452	007320201	S	2416	CTGCCATCCTACTGGCTCTGTTTCTTTAAAGTTTCTGTGGGATTCGGGAG										
Mus musculus	Riken	ILMN_206271	ILMN_206271	D030067F24RIK	ri|D030067F24|PX00181L23|AK083689|1175					AK083689	D030067F24Rik		ILMN_1213249	003710743	S	445	TCTGGGTCTTCAAGAGGTCTCCTACCAATAGTTGGGTGAGTGTTGTTGGA										
Mus musculus	RefSeq	ILMN_221559	ILMN_322017	LOC100045793	XM_001474945.1	XM_001474945.1		100045793	149262980	XM_001474945.1	LOC100045793	XP_001474995.1	ILMN_2737232	000610408	S	1127	ACATCGATGCCGCCAACAACGTGGTCTACAAGCAGTACGAAGACATGGTG					PREDICTED: Mus musculus similar to growth/differentiation factor 7 (LOC100045793), mRNA.					
Mus musculus	RefSeq	ILMN_188202	ILMN_258382	ARIH1	NM_019927.1	NM_019927.1		23806	39930388	NM_019927.1	Arih1	NP_064311.1	ILMN_2712427	001690243	S	2039	CACAGTTGGATTCACTTTCTCTCATACCCTCAGGTCATGAGTGAATAATG	9	-	59240618-59240667	9qB	Mus musculus ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) (Arih1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARI; HHARI; UBCH7BP; AU021774; UIP77; Ari1; HARI	ARI; HHARI; UBCH7BP; AU021774; UIP77; Ari1; HARI
Mus musculus	RefSeq	ILMN_213672	ILMN_213672	FLYWCH2	NM_029798.2	NM_029798.2		76917	142372204	NM_029798.2	Flywch2	NP_084074.1	ILMN_1256528	002710735	S	590	CCAGCACTTCCCCATAACCTTGGCAACTGCTGTTGCATAAGCTACTTTTA	17	-	23913935-23913968:23913969-23913984	17qA3.3	Mus musculus FLYWCH family member 2 (Flywch2), mRNA.				2810417J12Rik; AW548203; 3010014L17Rik	2810417J12Rik; AW548203; 3010014L17Rik
Mus musculus	RefSeq	ILMN_188448	ILMN_261388	RWDD1	NM_025614.3	NM_025614.3		66521	146134916	NM_025614.3	Rwdd1	NP_079890.1	ILMN_2642525	007650520	S	27	GGCTGTTTCTCAGCAATCCGTGCCAGGCGTGGCTCCAGGCCTTTCCACTC				10qB1	Mus musculus RWD domain containing 1 (Rwdd1), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2610002D06Rik; 0710001K08Rik; 2700069A07Rik	2610002D06Rik; 0710001K08Rik; 2700069A07Rik
Mus musculus	RefSeq	ILMN_260097	ILMN_260097	SERAC1	NM_001033127.1	NM_001033127.1		321007	85701653	NM_001033127.1	Serac1	NP_001028299.1	ILMN_3134990	005490243	A	963	GAGGCTCTACCAGCTTCACAAGGACTGCCCCAAAGTACAGAGAAACGTCA	17	-	6016743-6016792	17qA1	Mus musculus serine active site containing 1 (Serac1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	D17Ertd141e; 4930511N22Rik	D17Ertd141e; 4930511N22Rik
Mus musculus	RefSeq	ILMN_196248	ILMN_260216	TCOF1	NM_011552.2	NM_011552.2		21453	118130121	NM_011552.2	Tcof1	NP_035682.1	ILMN_2608933	005270563	S	3838	GTGGCGAGCAGAGCGACCCGAAGAGCAAGTCGAAAAAGAAGAAATCCCTC	18	-	60975658-60975707	18qE1	Mus musculus Treacher Collins Franceschetti syndrome 1, homolog (Tcof1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The synthesis of the large ribosomal RNA (rRNA) transcript which encodes several rRNAs, e.g. in mammals 28S, 18S and 5.8S, from a nuclear DNA template [goid 42790] [evidence IMP]		AW209012; treacle; AA408847	AW209012; treacle; AA408847
Mus musculus	RefSeq	ILMN_217614	ILMN_217614	RDH14	NM_023697.1	NM_023697.1		105014	12963790	NM_023697.1	Rdh14	NP_076186.1	ILMN_2685478	004200411	S	763	CCCGTCGCTTAGAAGGAACAAACGTGACTGTCAATGTGCTGCATCCTGGT	12	+	10401659-10401708	12qA1.1	Mus musculus retinol dehydrogenase 14 (all-trans and 9-cis) (Rdh14), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	PAN2; AW215439; 3110030G19Rik	PAN2; AW215439; 3110030G19Rik
Mus musculus	RefSeq	ILMN_217614	ILMN_217614	RDH14	NM_023697.1	NM_023697.1		105014	12963790	NM_023697.1	Rdh14	NP_076186.1	ILMN_2685477	002650626	S	761	AGCCCGTCGCTTAGAAGGAACAAACGTGACTGTCAATGTGCTGCATCCTG	12	+	10401657-10401706	12qA1.1	Mus musculus retinol dehydrogenase 14 (all-trans and 9-cis) (Rdh14), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	PAN2; AW215439; 3110030G19Rik	PAN2; AW215439; 3110030G19Rik
Mus musculus	RefSeq	ILMN_247148	ILMN_247148	TMPRSS11B	NM_177024.2	NM_177024.2		319875	31342623	NM_177024.2	Tmprss11b	NP_795998.1	ILMN_2882189	004050703	S	1220	TTGGGATAGTGAGCTGGGGGCATGAATGTGGCAGAGTCAACAAGCCAGGG	5	-	87735081-87735130	5qE1	Mus musculus transmembrane protease, serine 11b (Tmprss11b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	9930019B18Rik	9930019B18Rik
Mus musculus	RefSeq	ILMN_198169	ILMN_198169	LOC231069	XM_144245.2	XM_144245.2			38082409	XM_144245.2	LOC231069		ILMN_1235105	006770487	S	605	AGACCCAAGAGCTAGAGGAGAACAAGCGGTCCCTTGCCGCCCTGGATACA										
Mus musculus	MEEBO	ILMN_196022	ILMN_196022	SC5D	scl35983.7_0				27777692	NM_172769	Sc5d		ILMN_1225039	004150747	S	6	CTATACCAGTGCCAACACCACTCCTGGTCAAGACAGACAGATCCTTAACC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 5-alpha-cholest-7-en-3-beta-ol + O2 = cholesta-5,7-dien-3-beta-ol + H2O2 [goid 50046] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212519	ILMN_249480	GABRR2	NM_008076.3	NM_008076.3		14409	87299641	NM_008076.3	Gabrr2	NP_032102.2	ILMN_2771013	007510603	S	1698	ATCTCATGATATTCCAGTTCACACTTTTGACTTCTCTGAACAGACAGCTG	4	+	33182718-33182767	4qA5	Mus musculus gamma-aminobutyric acid (GABA-C) receptor, subunit rho 2 (Gabrr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IMP]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence TAS]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IMP]		
Mus musculus	Riken	ILMN_207151	ILMN_207151	CPO	ri|F730036D03|PL00003J09|AK089471|1362					AK089471	Cpo		ILMN_1226474	003710561	S	991	AAACAAAGATACTGCTGGGGTGAGCCGAGGAGCGGGCGTTGAACCCAACG										
Mus musculus	Riken	ILMN_202438	ILMN_202438	5530401P20RIK	ri|5530401P20|PX00023C17|AK017443|1950					AK017443	5530401P20Rik		ILMN_1239072	005220129	S	1498	CTGCAGCAGAAAGATGTAAGCTGCAGAGAAGCTAGAAACTCCTAACCTTC										
Mus musculus	RefSeq	ILMN_211717	ILMN_211717	GADD45GIP1	NM_183358.2	NM_183358.2		102060	40254410	NM_183358.2	Gadd45gip1	NP_899202.2	ILMN_2830860	002570048	S	833	GCCATGAACTGGGGCTTTGGGGAGAGAGAAAGGGGAATGGATGGGCAAAT	8	+	87724686-87724735	8qC3	Mus musculus growth arrest and DNA-damage-inducible, gamma interacting protein 1 (Gadd45gip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		Plinp1; Crif1; 2310040G17Rik; AI425883	Plinp1; Crif1; 2310040G17Rik; AI425883
Mus musculus	RefSeq	ILMN_246413	ILMN_246413	SSXB10	NM_199064.1	NM_199064.1		385312	51468089	NM_199064.1	Ssxb10	NP_951019.1	ILMN_2981324	004280348	S	696	ACTGACAGTCGAAATAAGCCCACGGTGGAAGAAGGAGGGAGTGGCGATTC	X	+	7912776-7912779:7913184-7913229	XqA1.1	Mus musculus synovial sarcoma, X member B, breakpoint 10 (Ssxb10), mRNA.					
Mus musculus	RefSeq	ILMN_200557	ILMN_200557	LOC383347	XM_356997.1	XM_356997.1			38083669	XM_356997.1	LOC383347		ILMN_1218838	004480465	S	719	ACAGGGGATCCTGTACCTTGGGCAGAGAGGGGCAAGCAGATGCCAAGTTC										
Mus musculus	RefSeq	ILMN_219894	ILMN_219894	TIAM2	NM_011878.1	NM_011878.1		24001	6755267	NM_011878.1	Tiam2	NP_036008.1	ILMN_2836875	001340762	S	5937	GGCCCCTACCCCCAGTCCTTTGGGCATTTTCTTTGAGCTGTTAGGTTTTG	17	+	3519207-3519256	17qA1	Mus musculus T-cell lymphoma invasion and metastasis 2 (Tiam2), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA];  [goid 5057] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]	STEF; mKIAA2016; 3000002F19Rik	STEF; mKIAA2016; 3000002F19Rik
Mus musculus	RefSeq	ILMN_213122	ILMN_213122	PDE6D	NM_008801.2	NM_008801.2		18582	31982129	NM_008801.2	Pde6d	NP_032827.1	ILMN_3158668	001990291	A	823	GGGATAAGCCTCGACTCCTTCCTGGCGCAAACATGGGAACAAACCCTCCC	1	-	88439809-88439858	1qD	Mus musculus phosphodiesterase 6D, cGMP-specific, rod, delta (Pde6d), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence TAS]	AI841218	AI841218
Mus musculus	RefSeq	ILMN_213122	ILMN_213122	PDE6D	NM_008801.2	NM_008801.2		18582	31982129	NM_008801.2	Pde6d	NP_032827.1	ILMN_3079421	007400008	I	154	TGTCAGCCAAGGACGAGCGGGCCAGGGATATCCTGAGAGGCTTCAAACTA	1	-	88444191-88444192:88478875-88478922	1qD	Mus musculus phosphodiesterase 6D, cGMP-specific, rod, delta (Pde6d), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence TAS]	AI841218	AI841218
Mus musculus	RefSeq	ILMN_213122	ILMN_213122	PDE6D	NM_008801.2	NM_008801.2		18582	31982129	NM_008801.2	Pde6d	NP_032827.1	ILMN_2633897	000460451	S	452	CTCCACAAACACCTGGCAGTCCTTGATAGAAGCAGCGCCTGAGTCCCAGA	1	-	88442298-88442347	1qD	Mus musculus phosphodiesterase 6D, cGMP-specific, rod, delta (Pde6d), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence TAS]	AI841218	AI841218
Mus musculus	RefSeq	ILMN_213122	ILMN_213122	PDE6D	NM_008801.2	NM_008801.2		18582	31982129	NM_008801.2	Pde6d	NP_032827.1	ILMN_1260174	001010730	S	570	GTCAGCACATCCAAAGTGAGGCTTTTCTATGTTTGAGAGAATTTGTGTGC	1	-	88440062-88440076:88440077-88440111	1qD	Mus musculus phosphodiesterase 6D, cGMP-specific, rod, delta (Pde6d), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence TAS]	AI841218	AI841218
Mus musculus	Riken	ILMN_206280	ILMN_206280	A230078D05RIK	ri|A230078D05|PX00316C24|AK079563|1759					AK079563	A230078D05Rik		ILMN_2578939	004220164	S	1319	GAAGTAGTGGATGATTGTGAGCCATCATTTGGGTGCTGATGGTGGACACC										
Mus musculus	RefSeq	ILMN_215058	ILMN_215058	OLFR1388	NM_146467.1	NM_146467.1		258459	33238931	NM_146467.1	Olfr1388	NP_666678.1	ILMN_2655044	001070347	S	624	CCCTGCGGCACTTATCCTGGGTTCCTATGCTCATATCACCAGGGCGGTAC	11	+	49257978-49258027	11qB1.2	Mus musculus olfactory receptor 1388 (Olfr1388), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-27B20.3; MGC129185; MOR256-28	RP23-27B20.3; MGC129185; MOR256-28
Mus musculus	RefSeq	ILMN_213391	ILMN_320684	LOC100048858	XM_001472990.1	XM_001472990.1		100048858	149268386	XM_001472990.1	LOC100048858	XP_001473040.1	ILMN_2655510	003890064	S	2981	GCTTTTTAAGTGAGGATCGTCCTGATGGTATCTAATGTCAGCAGTATTCC	17	+	7507187-7507236		PREDICTED: Mus musculus similar to Ribosomal protein S6 kinase, polypeptide 2 (LOC100048858), mRNA.					
Mus musculus	RefSeq	ILMN_214671	ILMN_214671	OSTN	NM_198112.2	NM_198112.2		239790	133892371	NM_198112.2	Ostn	NP_932780.1	ILMN_2650611	000650519	S	974	CTGAGCAATTGTGTTCTTTAGGAACTAATAAAGGATAGTATAATTGGCCC	16	+	27351001-27351050	16qB2	Mus musculus osteocrin (Ostn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IC ]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IDA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ostc	Ostc
Mus musculus	RefSeq	ILMN_184882	ILMN_225283	PAQR5	NM_028748.2	NM_028748.2		74090	142383667	NM_028748.2	Paqr5	NP_083024.1	ILMN_1222389	005860288	S	309	CCTGCATCCTCAGCCTCTTCCAAATGACCAATGAGACCCTCAACATCTGG	9	-	61823898-61823947	9qB	Mus musculus progestin and adipoQ receptor family member V (Paqr5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	0610010I15Rik; MGC118370; AV002411; BB115488	0610010I15Rik; MGC118370; AV002411; BB115488
Mus musculus	MEEBO	ILMN_188961	ILMN_188961	4931413I07RIK	scl0113875.1_242						4931413I07Rik		ILMN_1226310	000990274	S	17	GTCAATTTGCCCTAAGGGTCTTCTTGTCAGACAGGTTTTCTGTGCCAGGC										
Mus musculus	RefSeq	ILMN_256809	ILMN_256809	OLFR1500	NM_001011831.1	NM_001011831.1		258097	58801425	NM_001011831.1	Olfr1500	NP_001011831.1	ILMN_3161537	004040114	S	427	AGTTTTGTGGCTGGGGCTTACATTGCTGGCCTCCTCAGTGCCTTGGTGAG	19	-	13902408-13902457	19qA	Mus musculus olfactory receptor 1500 (Olfr1500), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR212-4P	MOR212-4P
Mus musculus	MEEBO	ILMN_210422	ILMN_210422	DOCK5	scl45385.18.1_0	NM_172811.1			27370209	NM_172811.1	Dock5		ILMN_2605457	005360632	S	3564	GGCTCCAGCGAGCTGTGCATCACCTCTTATCCGTGTGAATGTTTTCTGAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_224739	ILMN_224739	4921515J06RIK	NM_001078646.1	NM_001078646.1		66715	118403305	NM_001078646.1	4921515J06Rik	NP_001072114.1	ILMN_3111540	001240142	A	1190	CAGAGACTGCTCACTTACCCCAAACTGCACCGCCTGTGTGCTGATGAGGA	3	+	108763101-108763150	3qF3	Mus musculus RIKEN cDNA 4921515J06 gene (4921515J06Rik), transcript variant 2, mRNA.				MGC117573	MGC117573
Mus musculus	RefSeq	ILMN_184637	ILMN_249829	LETM2	NM_173012.2	NM_173012.2		270035	142345806	NM_173012.2	Letm2	NP_766600.1	ILMN_2630340	000870500	S	2626	TCTTCCACTTAGCAATATGCAATTACAGTTCTCCCATGAGGGACTAGAGA	8	-	26702424-26702473	8qA2	Mus musculus leucine zipper-EF-hand containing transmembrane protein 2 (Letm2), mRNA. XM_984118	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			D030041N04Rik; 6030453H13	D030041N04Rik; 6030453H13
Mus musculus	MEEBO	ILMN_193620	ILMN_193620	FREQ	scl5074.1.1_211				45433565	NM_019681	Freq		ILMN_2498878	002970746	S	15	CCCTCGGTGTCTCTTTTTGGGGTGCCGTCCTGTCTATGTCTTGGGGGACA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50806] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]		
Mus musculus	MEEBO	ILMN_195643	ILMN_195643	DDAH1	scl22489.6_38				38371754	NM_026993	Ddah1		ILMN_1256676	002060592	S	1	GACGCTAGTTGCCAGCTGCCTGCTCCTAATGTACACCAGTCAAGACAGAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence ISA]; The addition of a nitrosyl group to a protein amino acid [goid 17014] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2 [goid 16813] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence ISA]; Catalysis of the reaction: N(G),N(G)-dimethyl-L-arginine + H2O = dimethylamine + L-citrulline [goid 16403] [evidence ISA]		
Mus musculus	RefSeq	ILMN_209525	ILMN_209525	PDXDC1	NM_053181.2	NM_053181.2		94184	88758581	NM_053181.2	Pdxdc1	NP_444411.2	ILMN_2727980	005820500	S	2854	CACCTGCCACTTGAAACACTGCTCTCATGGCTCTGAAGCTAATCGTGATG	16	-	13836112-13836161	16qA1	Mus musculus pyridoxal-dependent decarboxylase domain containing 1 (Pdxdc1), transcript variant 1, mRNA.		The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	2210010A19Rik; AA415817; MGC8182; Kiaa0251-hp	2210010A19Rik; AA415817; MGC8182; Kiaa0251-hp
Mus musculus	RefSeq	ILMN_209525	ILMN_209525	PDXDC1	NM_053181.2	NM_053181.2		94184	88758581	NM_053181.2	Pdxdc1	NP_444411.2	ILMN_1250922	003800445	S	2687	GGGAGTTTTGCACAGACACATGTCAGAAAAGCGGGCTTTCTAGGGGGCAA	16	-	13836279-13836328	16qA1	Mus musculus pyridoxal-dependent decarboxylase domain containing 1 (Pdxdc1), transcript variant 1, mRNA.		The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	2210010A19Rik; AA415817; MGC8182; Kiaa0251-hp	2210010A19Rik; AA415817; MGC8182; Kiaa0251-hp
Mus musculus	RefSeq	ILMN_198843	ILMN_244895	ZFP583	NM_001033249.2	NM_001033249.2		213011	142376695	NM_001033249.2	Zfp583	NP_001028421.1	ILMN_1228620	006280577	S	1744	GGCCTTCAGCAACAGTTCATCGCTTGCACAGCATCAGAGAAGTCACACAG	7	-	6268238-6268287	7qA1	Mus musculus zinc finger protein 583 (Zfp583), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BC056221; Znf583	BC056221; Znf583
Mus musculus	RefSeq	ILMN_201203	ILMN_201203	LOC382074	XM_356153.1	XM_356153.1			38089803	XM_356153.1	LOC382074		ILMN_1252469	007160577	S	950	CTGGCCCCGGAAGCCTGGAAGAACACAGTCCGTCACAATCTCAGTTTCCG										
Mus musculus	RefSeq	ILMN_219687	ILMN_219687	GGN	NM_182694.2	NM_182694.2		243897	123173828	NM_182694.2	Ggn	NP_874353.2	ILMN_2712196	005570162	S	1646	CCCAAATTCGACTGGGTGAGCCCTCCTGATGGCACTGAACGGCATTTCCG	7	+	29957290-29957339	7qB1	Mus musculus gametogenetin (Ggn), transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence NAS]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [pmid 12574169] [evidence IEP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 12574169] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IDA]	MGC102222; AI593290	MGC102222; AI593290
Mus musculus	RefSeq	ILMN_199567	ILMN_199567	LOC382744	XM_356654.1	XM_356654.1			38074409	XM_356654.1	LOC382744		ILMN_2535686	006840477	S	1055	GCACACTCAGGTTCTTTGAAGGATTTTGCCTGGCTGGAATCATCCTCACC										
Mus musculus	RefSeq	ILMN_249213	ILMN_249213	OLFR1056	NM_147018.1	NM_147018.1		259020	27544964	NM_147018.1	Olfr1056	NP_667229.1	ILMN_2982525	005860678	S	534	TTGTGACAGTCTTCCCTTACTGACCTTGATCTGTTCAGGCACACGTGACG	2	-	86195954-86196003	2qD	Mus musculus olfactory receptor 1056 (Olfr1056), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR186-2	MOR186-2
Mus musculus	RefSeq	ILMN_218749	ILMN_218749	IHH	NM_010544.2	NM_010544.2		16147	31981670	NM_010544.2	Ihh	NP_034674.1	ILMN_2699737	004260612	S	1976	GTTTCTCGGGGCCTGGGATTGTGACTTTACTGTTGGCAACTGATCACAGT	1	-	74992310-74992359	1qC3	Mus musculus Indian hedgehog (Ihh), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The removal of an internal amino acid sequence (an intein) from a protein during protein maturation; the excision of inteins is precise and the N- and C-terminal exteins are joined by a normal peptide bond. Protein splicing involves 4 nucleophilic displacements by the 3 conserved splice junction residues [goid 16539] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_214608	ILMN_239993	SPECC1	NM_001029936.2	NM_001029936.2		432572	118131156	NM_001029936.2	Specc1	NP_001025107.1	ILMN_1229059	005270646	S	1333	CTGTAGCCTACGGAAGGTTGAGGAAGAAAACCAAGGCGCTATAGACATGA	11	+	61932394-61932443	11qB2	Mus musculus sperm antigen with calponin homology and coiled-coil domains 1 (Specc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-102H10.1; 2810012G08Rik; B230396K10Rik; KIAA4061; mKIAA4061	RP23-102H10.1; 2810012G08Rik; B230396K10Rik; KIAA4061; mKIAA4061
Mus musculus	RefSeq	ILMN_214608	ILMN_239993	SPECC1	NM_001029936.2	NM_001029936.2		432572	118131156	NM_001029936.2	Specc1	NP_001025107.1	ILMN_2649818	004540427	S	1324	GCAGCTGACCTGTAGCCTACGGAAGGTTGAGGAAGAAAACCAAGGCGCTA	11	+	61932385-61932434	11qB2	Mus musculus sperm antigen with calponin homology and coiled-coil domains 1 (Specc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-102H10.1; 2810012G08Rik; B230396K10Rik; KIAA4061; mKIAA4061	RP23-102H10.1; 2810012G08Rik; B230396K10Rik; KIAA4061; mKIAA4061
Mus musculus	RefSeq	ILMN_191985	ILMN_239993	SPECC1	NM_001029936.2	NM_001029936.2		432572	118131156	NM_001029936.2	Specc1	NP_001025107.1	ILMN_2483948	006760521	S	6523	GGCCTCCTTTCTGTCAAGAGCACACTAGATAGCACCAAGCACTGCCCAAG	11	+	62036362-62036411	11qB2	Mus musculus sperm antigen with calponin homology and coiled-coil domains 1 (Specc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-102H10.1; 2810012G08Rik; B230396K10Rik; KIAA4061; mKIAA4061	RP23-102H10.1; 2810012G08Rik; B230396K10Rik; KIAA4061; mKIAA4061
Mus musculus	RefSeq	ILMN_215830	ILMN_228456	ASPSCR1	NM_198223.1	NM_198223.1		68938	38016199	NM_198223.1	Aspscr1	NP_937866.1	ILMN_2682865	004730639	S	1374	TGACCCTGTATCCCTGGAGTCTGAGCCAATCGCTGAGGATGGGGCACTGG	11	+	120570462-120570511	11qE2	Mus musculus alveolar soft part sarcoma chromosome region, candidate 1 (human) (Aspscr1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IDA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; Any process that modulates the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46324] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ASPS; ASPC; ASPCR1; TUG; 1190006K01Rik; ASPL; RCC17	ASPS; ASPC; ASPCR1; TUG; 1190006K01Rik; ASPL; RCC17
Mus musculus	RefSeq	ILMN_228456	ILMN_228456	ASPSCR1	NM_198223.1	NM_198223.1		68938	38016199	NM_198223.1	Aspscr1	NP_937866.1	ILMN_3156058	005220546	A	1260	TCTCTATCTGGAACCTGGGCTGCTAGAACACACCGTCTCCCCATCTACAG	11	+	120570277-120570313:120570385-120570397	11qE2	Mus musculus alveolar soft part sarcoma chromosome region, candidate 1 (human) (Aspscr1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IDA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; Any process that modulates the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46324] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ASPS; ASPC; ASPCR1; TUG; 1190006K01Rik; ASPL; RCC17	ASPS; ASPC; ASPCR1; TUG; 1190006K01Rik; ASPL; RCC17
Mus musculus	RefSeq	ILMN_220351	ILMN_220351	GPD1	NM_010271.2	NM_010271.2		14555	31542905	NM_010271.2	Gpd1	NP_034401.1	ILMN_2808811	003710019	S	2300	GAGGGAGATCAGAGGGGGATGGGAGACTGCTTTGCACTGGCCCTGTTCCA	15	+	99554953-99555002	15qF1	Mus musculus glycerol-3-phosphate dehydrogenase 1 (soluble) (Gpd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate [goid 9331] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 46168] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 6072] [evidence IMP]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH + H+ [goid 4367] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16614] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Gdc1; AI747587; KIAA4010; mKIAA4010; Gdc-1	Gdc1; AI747587; KIAA4010; mKIAA4010; Gdc-1
Mus musculus	RefSeq	ILMN_222771	ILMN_222771	AY026312	NM_133359.1	NM_133359.1		170939	19111167	NM_133359.1	AY026312	NP_579937.1	ILMN_2851218	006840239	S	142	GGTTCCAGCTATGGCCTTGGGGGCTATGGTGGCTATGGCTACTTCAGTCC	16	-	88820932-88820981	16qC3.3	Mus musculus cDNA sequence AY026312 (AY026312), mRNA.					
Mus musculus	RefSeq	ILMN_202187	ILMN_227849	1700081D17RIK	NM_028526.3	NM_028526.3		73523	148232307	NM_028526.3	1700081D17Rik	NP_082802.1	ILMN_1246186	000430719	S	500	TGAGTGAACTGGGTTGGCTGAAGGAGAACGTGGGGCCCTGACTTGCCTTT				14qD2	Mus musculus RIKEN cDNA 1700081D17 gene (1700081D17Rik), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]			AI429082; 1700051A02Rik	AI429082; 1700051A02Rik
Mus musculus	RefSeq	ILMN_223543	ILMN_223543	GRID2IP	NM_133355.1	NM_133355.1		170935	19111165	NM_133355.1	Grid2ip	NP_579933.1	ILMN_2765510	005690592	S	3359	TCCGGTGGCCACCCACCCTTCCGCCTCGATGCCCACAACGGTGAATAAAA	5	+	144153377-144153426	5qG2	Mus musculus glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1 (Grid2ip), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor coupled to effectors through GTP-binding proteins [goid 7216] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_194757	ILMN_240032	WIPF3	XM_620310.4	XM_620310.4		330319	149255188	XM_620310.4	Wipf3	XP_620310.4	ILMN_2509327	002470754	S	4236	CCAAAAATAGCAAGCGAGGAACGGTCTCAGGGATCTGGCCTAGCAGCTCA	6	+	54453472-54453521	6qB3	PREDICTED: Mus musculus WAS/WASL interacting protein family, member 3 (Wipf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	Riken	ILMN_203943	ILMN_203943	A430083G20RIK	ri|A430083G20|PX00138B03|AK040288|2356					AK040288	A430083G20Rik		ILMN_1220256	003440047	S	1797	ACCCTAACTGGGTAAACAGAGGAGAGAGAAATGAGGGGGTGGCCTAGGAC										
Mus musculus	RefSeq	ILMN_213121	ILMN_213121	ATP2B3	NM_177236.3	NM_177236.3		320707	56699477	NM_177236.3	Atp2b3	NP_796210.2	ILMN_1243177	005270338	S	3628	GAAGAAGAAATTGACCATGCTGAACGAGAGCTCCGCAGGGGCCAGATCCT	X	+	70782437-70782466:70782294-70782313	XqA7.3	Mus musculus ATPase, Ca++ transporting, plasma membrane 3 (Atp2b3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]	Pmca3; 6430519O13Rik	Pmca3; 6430519O13Rik
Mus musculus	RefSeq	ILMN_213121	ILMN_213121	ATP2B3	NM_177236.3	NM_177236.3		320707	56699477	NM_177236.3	Atp2b3	NP_796210.2	ILMN_2677687	001090307	S	2916	CTCCAAGTTCCTGCAGTTTCAGTTGACAGTCAACGTGGTAGCTGTGATCG	X	+	70780861-70780910	XqA7.3	Mus musculus ATPase, Ca++ transporting, plasma membrane 3 (Atp2b3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]	Pmca3; 6430519O13Rik	Pmca3; 6430519O13Rik
Mus musculus	RefSeq	ILMN_217897	ILMN_217897	OPN4	NM_013887.1	NM_013887.1		30044	14349304	NM_013887.1	Opn4	NP_038915.1	ILMN_2689040	000990356	S	1689	CCCATACATCCCAGTTTCCCCTTGCTTTCCTAGAGGATGATGTGACTCTC	14	-	35405946-35405995	14qB	Mus musculus opsin 4 (melanopsin) (Opn4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; Any process that modulates the frequency, rate or extent of a circadian rhythm behavior [goid 42752] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [evidence IMP]		
Mus musculus	RefSeq	ILMN_186813	ILMN_259376	PACSIN2	NM_011862.2	NM_011862.2		23970	141802023	NM_011862.2	Pacsin2	NP_035992.1	ILMN_2712697	000770408	S	1298	AACCCCGCCCAGTCCACGCAGTTACAGTCCAGCTACAACCCCTTCGAGGA	15	-	83210146-83210195	15qE1	Mus musculus protein kinase C and casein kinase substrate in neurons 2 (Pacsin2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IDA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AI197433	AI197433
Mus musculus	RefSeq	ILMN_189962	ILMN_310453	6330419J24RIK	XM_001472650.1	XM_001472650.1		320237	149271634	XM_001472650.1	6330419J24Rik	XP_001472700.1	ILMN_1232801	005910754	S	454	CCCCATTGGCCAAAAGCGGGAGAGCCCAAAAGAGAGCATGCTACTACCAC	X	+	53628304-53628353	XqA5	PREDICTED: Mus musculus RIKEN cDNA 6330419J24 gene (6330419J24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210295	ILMN_210295	LRRC3	NM_145152.3	NM_145152.3		237387	142365689	NM_145152.3	Lrrc3	NP_660134.1	ILMN_2604179	006290035	S	1744	CCTGTCAACCTCGGTGGCTCTTGTGCCTTGCTTTCTACTGCCAATATCTA	10	-	77362796-77362845	10qC1	Mus musculus leucine rich repeat containing 3 (Lrrc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C21orf102	C21orf102
Mus musculus	RefSeq	ILMN_210265	ILMN_210265	S1PR4	NM_010102.1	NM_010102.1		13611	6753717	NM_010102.1	S1pr4	NP_034232.1	ILMN_2839479	001470687	S	1404	CAGCCATTAATCCTCTCATCTACTCCTTCCGCAGCCGTGAGGTGCAGCGC	10	-	80961429-80961478	10qC1	Mus musculus sphingosine-1-phosphate receptor 4 (S1pr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence TAS]	S1P4; MGC129298; lpC1	S1P4; MGC129298; lpC1
Mus musculus	RefSeq	ILMN_198727	ILMN_258709	LOC635720	XM_910856.3	XM_910856.3		635720	149271938	XM_910856.3	LOC635720	XP_915949.2	ILMN_1228478	002630246	S	448	CCAGCTGGAAACCTTAGAGAACTCGCACATGAAGATACCTGTCCAGAGTA					PREDICTED: Mus musculus similar to odorant binding protein Ib (LOC635720), mRNA.					
Mus musculus	RefSeq	ILMN_198609	ILMN_258709	LOC635720	XM_910856.3	XM_910856.3		635720	149271938	XM_910856.3	LOC635720	XP_915949.2	ILMN_2532295	005390332	S	223	GTCACTGGGTATAAGCAAGAAGATGGCAAGACTTTTAAAAACCAGTATGA					PREDICTED: Mus musculus similar to odorant binding protein Ib (LOC635720), mRNA.					
Mus musculus	RefSeq	ILMN_199277	ILMN_199277	LOC214151	XM_142537.2	XM_142537.2			38093691	XM_142537.2	LOC214151		ILMN_1240655	004760437	S	559	AGTGACATCATTAAGCTGAACAAGATGCAGCAAGGACTTCGTGACAGGCC										
Mus musculus	RefSeq	ILMN_218742	ILMN_218742	RASGRF1	NM_011245.2	NM_011245.2		19417	89111132	NM_011245.2	Rasgrf1	NP_035375.1	ILMN_1233146	000580746	S	4106	CGTCGCGTGCCTCTGTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATAT	9	+	89921695-89921744	9qE3.1	Mus musculus RAS protein-specific guanine nucleotide-releasing factor 1 (Rasgrf1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rac protein signal transduction [goid 35020] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Any process that activates or increases the activity of a GTPase of the Ras superfamily [goid 32320] [evidence IDA]; Any process that initiates the activity of an inactive GTPase of the Rac family through the replacement of GDP by GTP [goid 32863] [evidence IDA]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Interacting selectively with a glutamate receptor [goid 35254] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CDC25Mm; p190; p190RhoGEF; Ras-GRF1; Grfbeta; Grf1; P190-A; CDC25	CDC25Mm; p190; p190RhoGEF; Ras-GRF1; Grfbeta; Grf1; P190-A; CDC25
Mus musculus	RefSeq	ILMN_197672	ILMN_224479	GM1652	XM_924201.2	XM_924201.2		381481	94370462	XM_924201.2	Gm1652	XP_929294.2	ILMN_2528953	003940563	S	686	CAGGCGTGTGTGTGGAAGGACGATGGTTTCAGGCCGTGCATCAGAGAGTC				3qH2	PREDICTED: Mus musculus gene model 1652, (NCBI) (Gm1652), mRNA.					
Mus musculus	Riken	ILMN_202030	ILMN_202030	NUDT7	ri|2210404C19|ZX00051F16|AK008824|702					AK008824	Nudt7		ILMN_2546495	001510706	S	513	AAGAGGGGAGCCACCTCAGTGAGTTTCAGACTGGTGCCATGGAACTCTGG						A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways involving a nucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with diphosphate on its glycose moiety [goid 9132] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15938] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated [goid 46356] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + H2O = CoA + acetate [goid 3986] [evidence IDA]		
Mus musculus	Riken	ILMN_205434	ILMN_205434	E330023A07RIK	ri|E330023A07|PX00212F01|AK054406|2107					AK054406	E330023A07Rik		ILMN_1252615	000450593	S	1893	TGAGCAAGGTGACCAAGCCAAACAGGACGAGGTTGTCAGCAAGGTGGGCC										
Mus musculus	RefSeq	ILMN_212573	ILMN_212573	SERPINB6C	NM_148942.2	NM_148942.2		97848	142347363	NM_148942.2	Serpinb6c	NP_683744.2	ILMN_2627952	002970500	S	1097	CTGAAGGGGTCATCACGGTCCACCCCTTGTTTCTGTGTTAACCGCCCCTT	13	-	33971866-33971915	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 6c (Serpinb6c), mRNA.				ovalbumin; C76174; C76171; SPIC; RP23-262J21.6; SPI3C	ovalbumin; C76174; C76171; SPIC; RP23-262J21.6; SPI3C
Mus musculus	RefSeq	ILMN_212294	ILMN_212294	TCF19	NM_025674.1	NM_025674.1		106795	22094990	NM_025674.1	Tcf19	NP_079950.1	ILMN_2624827	006330725	S	1336	CCGGTCCCAGAAACCATTCCTAGAAGGTATGGTTTTATTTTGCTGAAGCC	17	-	35687645-35687694	17qB1	Mus musculus transcription factor 19 (Tcf19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			5730403J10Rik; AW495861	5730403J10Rik; AW495861
Mus musculus	RefSeq	ILMN_215477	ILMN_215477	TTC23	NM_025905.2	NM_025905.2		67009	31981131	NM_025905.2	Ttc23	NP_080181.2	ILMN_1241020	001450164	S	2034	ATGGCAGTACCATGAATCTTCCACACCCCAATTGTGAATGCCCTTTGGGG	7	+	74871170-74871219	7qC	Mus musculus tetratricopeptide repeat domain 23 (Ttc23), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1600012K10Rik	1600012K10Rik
Mus musculus	RefSeq	ILMN_202058	ILMN_215477	TTC23	NM_025905.2	NM_025905.2		67009	31981131	NM_025905.2	Ttc23	NP_080181.2	ILMN_1223191	004250360	S	714	CCCTGAGCCAGATTAACATACGCCTCCGCTAGTTTCCAGTGCCAGTCGCC	7	+	74812157-74812172:74814584-74814617	7qC	Mus musculus tetratricopeptide repeat domain 23 (Ttc23), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1600012K10Rik	1600012K10Rik
Mus musculus	RefSeq	ILMN_223206	ILMN_322374	LOC100044182	XM_001471872.1	XM_001471872.1		100044182	149267710	XM_001471872.1	LOC100044182	XP_001471922.1	ILMN_2760743	000780327	S	1455	TGTGTATATTTAACATTCTATTCTGATGTACTTATCAAAGAGCAGCTGTC					PREDICTED: Mus musculus hypothetical protein LOC100044182 (LOC100044182), mRNA.					
Mus musculus	RefSeq	ILMN_184627	ILMN_184627	USP8	NM_019729.2	NM_019729.2		84092	31981043	NM_019729.2	Usp8	NP_062703.2	ILMN_2420200	005910026	S	2331	GCTGAGATTTCGAGGCTTTCTGCTTCTCAGATTCGGAACCTCAATCCTGT	2	+	126576735-126576784	2qF1	Mus musculus ubiquitin specific peptidase 8 (Usp8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]	AI574262; mKIAA0055; AW557536; Ubpy	AI574262; mKIAA0055; AW557536; Ubpy
Mus musculus	RefSeq	ILMN_184627	ILMN_184627	USP8	NM_019729.2	NM_019729.2		84092	31981043	NM_019729.2	Usp8	NP_062703.2	ILMN_2451520	004590070	S	356	TGAGGAAAGGGCCTATGTGCTTTATATGAAATATGTGGCAGTTTATAATC	2	+	126545821-126545870	2qF1	Mus musculus ubiquitin specific peptidase 8 (Usp8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]	AI574262; mKIAA0055; AW557536; Ubpy	AI574262; mKIAA0055; AW557536; Ubpy
Mus musculus	RefSeq	ILMN_184627	ILMN_184627	USP8	NM_019729.2	NM_019729.2		84092	31981043	NM_019729.2	Usp8	NP_062703.2	ILMN_1214515	006040463	S	19	AGCTGAGATTTCGAGGCTTTCTGCTTCTCAGATTCGGAACCTCAATCCTG	2	+	126533117-126533166	2qF1	Mus musculus ubiquitin specific peptidase 8 (Usp8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]	AI574262; mKIAA0055; AW557536; Ubpy	AI574262; mKIAA0055; AW557536; Ubpy
Mus musculus	RefSeq	ILMN_222241	ILMN_222241	FA2H	NM_178086.2	NM_178086.2		338521	31342560	NM_178086.2	Fa2h	NP_835187.1	ILMN_2746783	002810706	S	2176	CTGGCCCCAAATGAAGTAGCTGGTCAGATGGCCCTTTCTAATCCTATGTA	8	-	113869298-113869347	8qE1	Mus musculus fatty acid 2-hydroxylase (Fa2h), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	FAAH; Faxdc1; G630055L08Rik	FAAH; Faxdc1; G630055L08Rik
Mus musculus	Riken	ILMN_203337	ILMN_203337	9130022E12RIK	ri|9130022E12|PX00026B23|AK033596|2359					AK033596	9130022E12Rik		ILMN_1247847	006900301	S	1750	CCGAGTGGTACAGAGGGTATGGCAGGGTGCCTGCTGAGTTCGTTACAACT										
Mus musculus	RefSeq	ILMN_198248	ILMN_243632	LOC636884	XM_912426.2	XM_912426.2		636884	149268989	XM_912426.2	LOC636884	XP_917519.2	ILMN_1224569	006100327	S	1558	GACTCCTTGGGCATAGCTCTCACCACCACAGCACTGTGCTTATCTGTGCT					PREDICTED: Mus musculus similar to putative pheromone receptor (LOC636884), mRNA.					
Mus musculus	RefSeq	ILMN_216079	ILMN_246789	DAPL1	NM_029723.2	NM_029723.2		76747	142370442	NM_029723.2	Dapl1	NP_083999.1	ILMN_1226556	001570288	S	337	GAAGAGGGCCTACATTATTCAGCAACCTCGAAAATGTTAGACCAGGACAG	2	+	59342845-59342884:59342885-59342894	2qC1.1	Mus musculus death associated protein-like 1 (Dapl1), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		2310032F03Rik; EEDA	2310032F03Rik; EEDA
Mus musculus	RefSeq	ILMN_217079	ILMN_217079	RUSC1	NM_028188.2	NM_028188.2		72296	139948763	NM_028188.2	Rusc1	NP_082464.2	ILMN_2678877	006350743	S	1620	CTCTTTACGCCTCTGACCGGGTGGTCCAATTCCCGGCTCCGGCTGCTGGG	3	-	88894680-88894729	3qF1	Mus musculus RUN and SH3 domain containing 1 (Rusc1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			NESCA; 2210403N08Rik; AA408288	NESCA; 2210403N08Rik; AA408288
Mus musculus	MEEBO	ILMN_195915	ILMN_195915	A430106G13RIK	scl17415.2_717						A430106G13Rik		ILMN_1228804	002480343	S	20	TGTGTTTTGTTTCAAGCCACAATATCTGCCTCTTTGCTGTCCTGAACACT										
Mus musculus	Riken	ILMN_201673	ILMN_201673	1810015H18RIK	ri|1810015H18|R000022L19|AK007511|1150					AK007511	1810015H18Rik		ILMN_1237614	000050040	S	902	CTTGTTTCAAGTAGTATACAGATGAGAGCTAACTATTTGTGTTTAAAGGG										
Mus musculus	RefSeq	ILMN_219158	ILMN_219158	DSCR3	NM_007834.1	NM_007834.1		13185	6681144	NM_007834.1	Dscr3	NP_031860.1	ILMN_2988631	004280768	S	1930	AACTGGGGCACTGCTGCTGGGGCCTCACCAGGGAAACTGAGAAGACTTAG	16	-	94606761-94606810	16qC4	Mus musculus Down syndrome critical region gene 3 (Dscr3), mRNA.	A conserved multimeric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. For example, the budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p [goid 30904] [evidence IEA]	The directed movement of substances into, out of or within a vacuole [goid 7034] [evidence IEA]		AW538125; Dcra; MGC5833	AW538125; Dcra; MGC5833
Mus musculus	RefSeq	ILMN_193720	ILMN_241100	WDR75	NM_028599.2	NM_028599.2		73674	141801733	NM_028599.2	Wdr75	NP_082875.1	ILMN_2524043	004280142	S	2092	ACGACCCCATTTTCTTTCATATTGGGAAAACACAGGCAACAGCAGGGTGC	1	+	45879317-45879366	1qC1.1	Mus musculus WD repeat domain 75 (Wdr75), mRNA. XM_899942 XM_899949 XM_905443 XM_919350 XM_919365 XM_919374 XM_919385 XM_919393 XM_919402				FLJ12545; 1300003A18Rik; MGC143988; C77608; 2410118I19Rik	FLJ12545; 1300003A18Rik; MGC143988; C77608; 2410118I19Rik
Mus musculus	RefSeq	ILMN_217827	ILMN_217827	ATP13A5	NM_175650.3	NM_175650.3		268878	141802262	NM_175650.3	Atp13a5	NP_783581.1	ILMN_2688054	000450753	S	4220	TGAAGCATATTTATGTACATATGTTGGCCAGGATCATGAAATGCCTCCTG	16	-	29232265-29232314	16qB2	Mus musculus ATPase type 13A5 (Atp13a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	C630015F21Rik	C630015F21Rik
Mus musculus	RefSeq	ILMN_216878	ILMN_216878	FASTKD2	NM_172422.2	NM_172422.2		75619	142377682	NM_172422.2	Fastkd2	NP_766010.1	ILMN_2676388	000150288	S	2632	CCAAGTTCTCAAGCCGTAGGTCATGCAAGAGTTGGTGAGGTAGCATGTGA	1	+	63799412-63799461	1qC2	Mus musculus FAST kinase domains 2 (Fastkd2), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2810421I24Rik	2810421I24Rik
Mus musculus	RefSeq	ILMN_241459	ILMN_241459	LOC382243	NM_001037716.1	NM_001037716.1		382243	83423521	NM_001037716.1	LOC382243	NP_001032805.1	ILMN_3160984	004610386	S	742	GCCCAAAGAGGGAGAGCTCATGATAACCATACAGGGTTAGCTCATCACAA	X	+	144957549-144957598	XqF3	Mus musculus similar to ovary testis transcribed (LOC382243), mRNA.				MGC129143	MGC129143
Mus musculus	RefSeq	ILMN_234813	ILMN_234813	AMY2	NM_009669.1	NM_009669.1		11723	6753051	NM_009669.1	Amy2	NP_033799.1	ILMN_2874291	002030343	S	333	TGTCCGTATTTATGTGGATGCTGTCATTAACCACATGTGTGGCGCAGGCA	3	-	113384967-113385016		Mus musculus amylase 2, pancreatic (Amy2), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the hydrolysis of amylose or an amylose derivative [goid 16160] [evidence IDA]	Amy-2	Amy-2
Mus musculus	MEEBO	ILMN_187128	ILMN_187128	ZFP67	scl022724.2_70	NM_009565.1			6677624	NM_009565.1	Zfp67		ILMN_2441391	006220014	S	5	CAACGGGGAGCACATAAAACAAGTGGTATCGGGGTCGGGGGTGCTGAACC										
Mus musculus	RefSeq	ILMN_195778	ILMN_195778	XPR1	NM_011273.2	NM_011273.2		19775	71067118	NM_011273.2	Xpr1	NP_035403.1	ILMN_2845849	001070184	S	7212	CACACCCCGTGTTGGTTAGGTGATGCTGTCCGGTGACTCCCTGAACTATA	1	-	157123176-157123225	1qG3	Mus musculus xenotropic and polytropic retrovirus receptor 1 (Xpr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	Rmc-1; Syg1; Sxv; XR; Rmc1	Rmc-1; Syg1; Sxv; XR; Rmc1
Mus musculus	RefSeq	ILMN_204336	ILMN_195778	XPR1	NM_011273.2	NM_011273.2		19775	71067118	NM_011273.2	Xpr1	NP_035403.1	ILMN_1214765	002000133	S	7301	GGTGACCCTTGCCCCATGTGCACCCTTGCTTTCTTTCCTACTCTCCACTC	1	-	157123087-157123136	1qG3	Mus musculus xenotropic and polytropic retrovirus receptor 1 (Xpr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	Rmc-1; Syg1; Sxv; XR; Rmc1	Rmc-1; Syg1; Sxv; XR; Rmc1
Mus musculus	RefSeq	ILMN_256117	ILMN_256117	NVL	NM_026171.1	NM_026171.1		67459	33468980	NM_026171.1	Nvl	NP_080447.1	ILMN_2936954	004010041	S	2625	CGCTACCTGGCATGGAGGAGGTGTCTAGTGTGTGGAACTCACCACGAATC	1	-	183023939-183023988	1qH4	Mus musculus nuclear VCP-like (Nvl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	1200009I24Rik	1200009I24Rik
Mus musculus	RefSeq	ILMN_195377	ILMN_256117	NVL	NM_026171.1	NM_026171.1		67459	33468980	NM_026171.1	Nvl	NP_080447.1	ILMN_1235669	003940368	S	127	GTGGCAAATATGTGGACACTGGAATCTTAGCATCCGACTTGCAAAGACTG	1	-	183072461-183072510	1qH4	Mus musculus nuclear VCP-like (Nvl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	1200009I24Rik	1200009I24Rik
Mus musculus	RefSeq	ILMN_197666	ILMN_261543	HOXC11	NM_001024842.1	NM_001024842.1		109663	67625730	NM_001024842.1	Hoxc11	NP_001020013.1	ILMN_1245642	002070382	S	612	GAACACGAATCCCAGCTCGTCCGGTTCTTCCCACTCGGCGACCAAGGAGC	15	+	102785568-102785617	15qF3	Mus musculus homeo box C11 (Hoxc11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-3.7	Hox-3.7
Mus musculus	RefSeq	ILMN_261543	ILMN_261543	HOXC11	NM_001024842.1	NM_001024842.1		109663	67625730	NM_001024842.1	Hoxc11	NP_001020013.1	ILMN_2988178	006380093	S	679	CCCAACGCCCCCCGCACCCGCAAGAAGCGCTGCCCTTATTCGAAATTCCA	15	+	102785635-102785638:102786900-102786945	15qF3	Mus musculus homeo box C11 (Hoxc11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-3.7	Hox-3.7
Mus musculus	Riken	ILMN_201671	ILMN_201671	1810020C02RIK	ri|1810020C02|R000022J12|AK007556|418					AK007556	1810020C02Rik		ILMN_2543655	000070162	S	205	TGATGGGAACAGGACCTAGTTTTGCCTGTTTTGGTTACGGCCTCACAGGC										
Mus musculus	RefSeq	ILMN_217060	ILMN_217060	ODF3L1	NM_198673.1	NM_198673.1		382075	38348575	NM_198673.1	Odf3l1	NP_941075.1	ILMN_1226833	004670102	S	819	TCCCACGACATCCAGCCGGTCACTGTGCACAAACCCCGCATACCTGCCTT	9	-	56696677-56696726	9qB	Mus musculus outer dense fiber of sperm tails 3-like 1 (Odf3l1), mRNA.				MGC58606; Gm1116; BC049697	MGC58606; Gm1116; BC049697
Mus musculus	MEEBO	ILMN_223877	ILMN_223877	MAP3K6	scl24866.28.1_30				33186927	NM_016693	Map3k6		ILMN_2770894	005670240	S	4245	CCCAACCCCAATGGGTGGAACTAACTAGGGAGGCACCCAAAGGACACTAC							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210426	ILMN_210426	TEX261	NM_009357.1	NM_009357.1		21766	6678296	NM_009357.1	Tex261	NP_033383.1	ILMN_1253322	006590091	S	1288	GTAGAAAGTCTGTAGCTGGGTTAGAGATGTAGACCATCTACAATACCCTA	6	-	83720471-83720520	6qC3	Mus musculus testis expressed gene 261 (Tex261), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TEG-261; 3110001O07Rik; AI480706; AA409339; AL033351	TEG-261; 3110001O07Rik; AI480706; AA409339; AL033351
Mus musculus	RefSeq	ILMN_210426	ILMN_210426	TEX261	NM_009357.1	NM_009357.1		21766	6678296	NM_009357.1	Tex261	NP_033383.1	ILMN_2605494	006110114	S	1005	GTCCTGTCCAATGCTGATTCCCTTTCGAATAAAGATTCTAGGTGGCACTG	6	-	83720754-83720803	6qC3	Mus musculus testis expressed gene 261 (Tex261), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TEG-261; 3110001O07Rik; AI480706; AA409339; AL033351	TEG-261; 3110001O07Rik; AI480706; AA409339; AL033351
Mus musculus	RefSeq	ILMN_225630	ILMN_225630	BC080695	NM_001007579.1	NM_001007579.1		329986	56090468	NM_001007579.1	BC080695	NP_001007580.1	ILMN_2947329	007570386	S	1874	GCTCAGCTTGGAGGCAACCTCACTGTAGGACTCTATTCATTAGGGCTCCC	4	+	142840256-142840305	4qE1	Mus musculus cDNA sequence BC080695 (BC080695), mRNA.				MGC91106	MGC91106
Mus musculus	Riken	ILMN_202253	ILMN_202253	4933412A02RIK	ri|4933412A02|PX00020A11|AK016783|1521					AK016783	4933412A02Rik		ILMN_1248084	002480500	S	466	GATGGGTACCGTCACCTGCTGTGTCTCCAGCTCCTCTCAAAAGGATGTGC										
Mus musculus	RefSeq	ILMN_232926	ILMN_232926	LOC545013	NM_001025085.1	NM_001025085.1		545013	68226434	NM_001025085.1	LOC545013	NP_001020256.1	ILMN_3022981	004250431	I	32	CCTTTCTGTTTGCTCTGGGATTACCAGCAGGAATGTTCTCCTGGCTGCTC	14	-	6122723-6122741:6122742-6122772	14qA1	Mus musculus hypothetical protein LOC545013 (LOC545013), mRNA.					
Mus musculus	RefSeq	ILMN_232926	ILMN_232926	LOC545013	NM_001025085.1	NM_001025085.1		545013	68226434	NM_001025085.1	LOC545013	NP_001020256.1	ILMN_3095356	006180379	A	726	CATGGGACTTGGGCTCCATAGTTTCTTCACAGCCAGACTGAACTACAAAG	14	-	6114618-6114667	14qA1	Mus musculus hypothetical protein LOC545013 (LOC545013), mRNA.					
Mus musculus	RefSeq	ILMN_185444	ILMN_185444	ZFP212	NM_145576.1	NM_145576.1		232784	21704157	NM_145576.1	Zfp212	NP_663551.1	ILMN_2521753	004730446	S	1576	CCCGAAGACACACTACAAAGTCTGGCTGGCTCCTTCCTGAGGAGAATTGC	6	+	47881632-47881681	6qB2.3	Mus musculus Zinc finger protein 212 (Zfp212), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mKIAA3011; Znf212	mKIAA3011; Znf212
Mus musculus	RefSeq	ILMN_185444	ILMN_185444	ZFP212	NM_145576.1	NM_145576.1		232784	21704157	NM_145576.1	Zfp212	NP_663551.1	ILMN_2455178	006510278	S	2292	GAGTTCAGTCCTGGGACTTTAGTGTCCCCTCTCCCCGATGTGTTTCTGCA	6	+	47882348-47882397	6qB2.3	Mus musculus Zinc finger protein 212 (Zfp212), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mKIAA3011; Znf212	mKIAA3011; Znf212
Mus musculus	RefSeq	ILMN_185444	ILMN_185444	ZFP212	NM_145576.1	NM_145576.1		232784	21704157	NM_145576.1	Zfp212	NP_663551.1	ILMN_1218015	006220088	S	1426	TGTCCAGAAGCAGCACCTCCTGCAGCACCAGAAAATTCACCAGCGGGAGC	6	+	47881482-47881531	6qB2.3	Mus musculus Zinc finger protein 212 (Zfp212), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mKIAA3011; Znf212	mKIAA3011; Znf212
Mus musculus	RefSeq	ILMN_185444	ILMN_185444	ZFP212	NM_145576.1	NM_145576.1		232784	21704157	NM_145576.1	Zfp212	NP_663551.1	ILMN_1245653	007040725	S	1496	TCTGCCAGACCCAATGGCCTGCTTTAAGGTTGCCAGCCCCTCACCGTCGT	6	+	47881552-47881566:47881567-47881601	6qB2.3	Mus musculus Zinc finger protein 212 (Zfp212), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mKIAA3011; Znf212	mKIAA3011; Znf212
Mus musculus	RefSeq	ILMN_185444	ILMN_185444	ZFP212	NM_145576.1	NM_145576.1		232784	21704157	NM_145576.1	Zfp212	NP_663551.1	ILMN_2946726	004480605	S	2509	GGGAGGTGAGAGTGGGTTCCTTGGTCATATGTGAATGTACTCTTGTCTGG	6	+	47882565-47882614	6qB2.3	Mus musculus Zinc finger protein 212 (Zfp212), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mKIAA3011; Znf212	mKIAA3011; Znf212
Mus musculus	Riken	ILMN_204610	ILMN_204610	VTI1-PENDING	ri|5330429B06|PX00054C12|AK030538|3372					AK030538	Vti1-pending		ILMN_1229729	000270484	S	2694	AAGGTAGGTTCCGAGTGGACTGCCCATAACTCCTGTAAGAAAAGCTCTGC										
Mus musculus	RefSeq	ILMN_207510	ILMN_207510	DRP2	XM_142131.1	XM_142131.1			20985495	XM_142131.1	Drp2		ILMN_1260472	002810079	I	3450	CACCTGTGGCACATGTGCCATCCTTCCTCGGCAGTCTAGCGGTGTGACTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200192	ILMN_200192	LOC385905	XM_358993.1	XM_358993.1			38080866	XM_358993.1	LOC385905		ILMN_1259916	005420148	S	776	GCGAGGAAGCAGAGAAATGTGCCAAGGGATCTTTGAAGGAAGAAGATGAG										
Mus musculus	RefSeq	ILMN_217560	ILMN_231647	E2F3	NM_010093.2	NM_010093.2		13557	142366145	NM_010093.2	E2f3	NP_034223.1	ILMN_2743503	005670253	S	1739	GCCTCTGGTGGAGGACTTCATGTGTAGTTGATTGGGCTTTGTACAAACTG	13	-	30001752-30001771:30001772-30001801	13qA3.2	Mus musculus E2F transcription factor 3 (E2f3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	E2F3b; E2f3a; mKIAA0075	E2F3b; E2f3a; mKIAA0075
Mus musculus	RefSeq	ILMN_214725	ILMN_321284	1700055D18RIK	XR_035225.1	XR_035225.1		73405	149252358	XR_035225.1	1700055D18Rik		ILMN_2651224	004050730	S	1515	AATGTCATGAAAATGAGAACACTTATATGTTTAACAAGATTTAATATAAA	4	+	45027208-45027257	4qB1	PREDICTED: Mus musculus RIKEN cDNA 1700055D18 gene (1700055D18Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_187902	ILMN_330430	5830416P10RIK	XM_001472614.1	XM_001472614.1		381232	149270831	XM_001472614.1	5830416P10Rik	XP_001472664.1	ILMN_2448110	005860593	S	39	GCAGTGGCTACAAACCAAAGGAGGACAGATAAGCAGGCTGCCCTGGACAC					PREDICTED: Mus musculus RIKEN cDNA 5830416P10 gene (5830416P10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_190234	ILMN_226040	MYLK	NM_139300.3	NM_139300.3		107589	126157498	NM_139300.3	Mylk	NP_647461.3	ILMN_1218347	000050048	S	7464	GCTGCATTGCCACTTCTTCCCCTGTTTCGCTTCTCTTAAGCAGTTTCAAT	16	+	35002175-35002224	16qB3	Mus musculus myosin, light polypeptide kinase (Mylk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + (myosin-light-chain) = ADP + (myosin-light-chain) phosphate [goid 4687] [evidence IEA]	MLCK108; AW489456; KRP; 9530072E15Rik; Mlck; MLCK210; A930019C19Rik	MLCK108; AW489456; KRP; 9530072E15Rik; Mlck; MLCK210; A930019C19Rik
Mus musculus	RefSeq	ILMN_190234	ILMN_226040	MYLK	NM_139300.3	NM_139300.3		107589	126157498	NM_139300.3	Mylk	NP_647461.3	ILMN_1219471	000430014	S	5693	TCAGGGAGTCCCGCCACTTCCAGATAGACTACGACGAAGACGGCAACTGC	16	+	35000404-35000453	16qB3	Mus musculus myosin, light polypeptide kinase (Mylk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + (myosin-light-chain) = ADP + (myosin-light-chain) phosphate [goid 4687] [evidence IEA]	MLCK108; AW489456; KRP; 9530072E15Rik; Mlck; MLCK210; A930019C19Rik	MLCK108; AW489456; KRP; 9530072E15Rik; Mlck; MLCK210; A930019C19Rik
Mus musculus	RefSeq	ILMN_190234	ILMN_226040	MYLK	NM_139300.3	NM_139300.3		107589	126157498	NM_139300.3	Mylk	NP_647461.3	ILMN_2662602	001240348	S	5412	CGGGAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAAT	16	+	34995186-34995235	16qB3	Mus musculus myosin, light polypeptide kinase (Mylk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + (myosin-light-chain) = ADP + (myosin-light-chain) phosphate [goid 4687] [evidence IEA]	MLCK108; AW489456; KRP; 9530072E15Rik; Mlck; MLCK210; A930019C19Rik	MLCK108; AW489456; KRP; 9530072E15Rik; Mlck; MLCK210; A930019C19Rik
Mus musculus	RefSeq	ILMN_185159	ILMN_220697	CNOT6L	NM_178854.3	NM_178854.3		231464	121674806	NM_178854.3	Cnot6l	NP_849185.2	ILMN_2642671	002900725	S	1750	CGGGGATCTGTCGCTATGGACCTGTACAGTTGTAAATCAAAGTATGTAGG	5	-	96506126-96506175	5qE3	Mus musculus CCR4-NOT transcription complex, subunit 6-like (Cnot6l), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4932442K20Rik; DKFZp434K098; MGC29037	4932442K20Rik; DKFZp434K098; MGC29037
Mus musculus	RefSeq	ILMN_220697	ILMN_220697	CNOT6L	NM_178854.3	NM_178854.3		231464	121674806	NM_178854.3	Cnot6l	NP_849185.2	ILMN_2725466	006620270	S	3049	GTTGGCCAGGAGGTGCCACTTGAGAATCTTACGTAAGAGGCAGAGAGCAT	5	-	96504827-96504876	5qE3	Mus musculus CCR4-NOT transcription complex, subunit 6-like (Cnot6l), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4932442K20Rik; DKFZp434K098; MGC29037	4932442K20Rik; DKFZp434K098; MGC29037
Mus musculus	RefSeq	ILMN_220590	ILMN_237273	OLFR677	NM_146358.1	NM_146358.1		258355	22129582	NM_146358.1	Olfr677	NP_666470.1	ILMN_1251653	003610315	S	628	GTGGACATGATCCTGATTGCCTCTTCCTATGTGCTTATCCTTCGAGCTGT	7	+	112205389-112205438	7qE3	Mus musculus olfactory receptor 677 (Olfr677), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR32-11	MOR32-11
Mus musculus	RefSeq	ILMN_196716	ILMN_196716	KLRA20	NM_053150.1	NM_053150.1		93967	21361213	NM_053150.1	Klra20	NP_444380.1	ILMN_1254393	000770193	S	680	GGCATGGATTGACAATGGCCCATCTAAACTTGCCTTGAACACAACGAAAT	6	-	130009846-130009867:130018658-130018685		Mus musculus killer cell lectin-like receptor subfamily A, member 20 (Klra20), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ly49t	Ly49t
Mus musculus	RefSeq	ILMN_196716	ILMN_196716	KLRA20	NM_053150.1	NM_053150.1		93967	21361213	NM_053150.1	Klra20	NP_444380.1	ILMN_1241820	006020438	S	935	GTGTTTTACCATTGGACATAGACTGGAGTGCAAAGAGAGAGACAATCTGG	6	-	130009591-130009640		Mus musculus killer cell lectin-like receptor subfamily A, member 20 (Klra20), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ly49t	Ly49t
Mus musculus	RefSeq	ILMN_199546	ILMN_199546	LOC383617	XM_357158.1	XM_357158.1			38074138	XM_357158.1	LOC383617		ILMN_2535610	003840019	S	10	TCCAACTTGGGCTGGTGGAATGGCTCCAGCAGAGAAGGATGGCAAGAAGG										
Mus musculus	MEEBO	ILMN_223847	ILMN_223847	DEFB37	scl35038.2.1_104				32129202	NM_181683	Defb37		ILMN_2770363	007650066	S	258	GCCACAAAAACTGATGATACGTCAGAACTTGCAAGAAGAAAGTGAAACCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	RefSeq	ILMN_216044	ILMN_216044	CEL	NM_009885.1	NM_009885.1		12613	6753405	NM_009885.1	Cel	NP_034015.1	ILMN_2666677	004760382	S	1709	TGACCCACCTTCAGACGACTCCCAGGTTGTTCCTGTCCCACCTACAGATG	2	-	28411619-28411668	2qA3	Mus musculus carboxyl ester lipase (Cel), mRNA.		The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of ceramides, any N-acetylated sphingoid [goid 46514] [evidence IMP]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion [goid 4104] [evidence IEA]; Catalysis of the reaction: a steryl ester + H2O = a sterol + a fatty acid [goid 4771] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]	BAL; 1810036E18Rik	BAL; 1810036E18Rik
Mus musculus	RefSeq	ILMN_213986	ILMN_213986	PLD5	NM_176916.4	NM_176916.4		319455	119943137	NM_176916.4	Pld5	NP_795890.2	ILMN_1213763	000050719	S	690	CATCTTTTCAGCGGTGGACATCATGGGAGAGGATGAGGATGGACTCTCAG	1	-	178070117-178070166	1qH4	Mus musculus phospholipase D family, member 5 (Pld5), mRNA. XM_899968 XM_915002 XM_923506 XM_923510 XM_923521 XM_923527	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	B230365F16Rik	B230365F16Rik
Mus musculus	RefSeq	ILMN_221864	ILMN_221864	GM672	NM_201354.1	NM_201354.1		269037	41235721	NM_201354.1	Gm672	NP_958742.1	ILMN_2741367	000610035	S	3358	AGGCAGCCAGATAGACAATGAAGTTCTTCAGGCTAGAAACAAAGTCCTGG	18	-	75593501-75593550	18qE3	Mus musculus gene model 672, (NCBI) (Gm672), mRNA.		The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC67202	MGC67202
Mus musculus	MEEBO	ILMN_211446	ILMN_211446	C330011J12RIK	scl17472.12.1_23	XM_136225.3			38073312	XM_136225.3	C330011J12Rik		ILMN_2615978	001740347	S	2446	CACGGTGGCAAGGAACTTTGCAGCCCCCTGCAGACCCGGCGGGCTCACTT										
Mus musculus	RefSeq	ILMN_209155	ILMN_209155	1700072E05RIK	NM_028554.1	NM_028554.1		73495	13386319	NM_028554.1	1700072E05Rik	NP_082830.1	ILMN_3080550	002450608	I	945	GGGGGCTCTGGCATCTGCCAGAAGATTTCTTTAAAAATGTGTCTGTATGC	X	+	82299929-82299978	XqC1	Mus musculus RIKEN cDNA 1700072E05 gene (1700072E05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209155	ILMN_209155	1700072E05RIK	NM_028554.1	NM_028554.1		73495	13386319	NM_028554.1	1700072E05Rik	NP_082830.1	ILMN_3160066	003140168	A	881	GGATCCACAGAGTGAAGTGGAGGCCCAGTGTGCTTCCAGACTGATCAATC	X	+	82299865-82299914	XqC1	Mus musculus RIKEN cDNA 1700072E05 gene (1700072E05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209155	ILMN_209155	1700072E05RIK	NM_028554.1	NM_028554.1		73495	13386319	NM_028554.1	1700072E05Rik	NP_082830.1	ILMN_2593058	000940754	S	674	AGCAGCCTTTGCACATTTGTTTCCGTGAGCTGGAACCATGTTGTAGACCT	X	+	82299658-82299707	XqC1	Mus musculus RIKEN cDNA 1700072E05 gene (1700072E05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220948	ILMN_319501	LOC100048436	XR_034485.1	XR_034485.1		100048436	149255786	XR_034485.1	LOC100048436		ILMN_2729015	004760424	S	1608	GAGCCCCTGTTGATATATGCAGCTATCGTGATAATCTGGATTTCTTGAGA					PREDICTED: Mus musculus similar to CDNA sequence BC049816 (LOC100048436), misc RNA.					
Mus musculus	RefSeq	ILMN_209924	ILMN_209924	NARG1L	NM_025832.2	NM_025832.2		66897	34328273	NM_025832.2	Narg1l	NP_080108.1	ILMN_2956743	001090735	S	3625	CATAGTGCTGTTGGACAGTATTTGAGGGGAGCCCTTTTTGCCATATCTAC	14	-	79734514-79734563	14qD3	Mus musculus NMDA receptor regulated 1-like (Narg1l), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1300019C06Rik	1300019C06Rik
Mus musculus	RefSeq	ILMN_209924	ILMN_209924	NARG1L	NM_025832.2	NM_025832.2		66897	34328273	NM_025832.2	Narg1l	NP_080108.1	ILMN_2733933	002570292	S	3427	CAGGCGATTGGGTAGGAATTGTGTTTTCGTGGTTGAGCTGCTTGGAGACT	14	-	79734712-79734761	14qD3	Mus musculus NMDA receptor regulated 1-like (Narg1l), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1300019C06Rik	1300019C06Rik
Mus musculus	RefSeq	ILMN_209924	ILMN_209924	NARG1L	NM_025832.2	NM_025832.2		66897	34328273	NM_025832.2	Narg1l	NP_080108.1	ILMN_2956741	007570521	S	3517	GGACTTGGCAGAGTACACACTAGAACACAGCACTACCTCCCTCACAGCCC	14	-	79734622-79734671	14qD3	Mus musculus NMDA receptor regulated 1-like (Narg1l), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1300019C06Rik	1300019C06Rik
Mus musculus	Riken	ILMN_202915	ILMN_202915	SMCX	ri|4732450E13|PX00051E19|AK028739|3524					AK028739	Smcx		ILMN_1254555	004860424	S	3174	AAAAAATATAACCCGGGCGAGGTGGTGCATGCCTGTAATCCCAGCACTCG										
Mus musculus	RefSeq	ILMN_224013	ILMN_236171	EAR14	NM_017389.2	NM_017389.2		503847	59933229	NM_017389.2	Ear14	NP_059085.2	ILMN_2773201	006900242	S	294	GGTATTTATAACTTTTTGTAACCTCACTACGCCGACAAGAATATGCACAC	14	+	51823663-51823712	14qC1	Mus musculus eosinophil-associated, ribonuclease A family, member 14 (Ear14), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199423	ILMN_199423	OLFR1324	NM_146292.1	NM_146292.1		258289	22129700	NM_146292.1	Olfr1324	NP_666404.1	ILMN_1239031	000050551	S	949	AGGGCACTGAGAAGGCTGCTCAGCCAAAAAAGCTTGATTTGTAGTTGGTG	X	-	47778673-47778722	XqA5	Mus musculus olfactory receptor 1324 (Olfr1324), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR128-2	MOR128-2
Mus musculus	RefSeq	ILMN_199423	ILMN_199423	OLFR1324	NM_146292.1	NM_146292.1		258289	22129700	NM_146292.1	Olfr1324	NP_666404.1	ILMN_1256784	000130639	S	841	GCTTCCAGCTACTCAGCAGAAAGGGATAAGGTAGCTGCCATCATGTATAC	X	-	47778781-47778830	XqA5	Mus musculus olfactory receptor 1324 (Olfr1324), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR128-2	MOR128-2
Mus musculus	RefSeq	ILMN_218381	ILMN_218381	CHMP2A	NM_026885.1	NM_026885.1		68953	21312150	NM_026885.1	Chmp2a	NP_081161.1	ILMN_2801790	001030242	S	786	CAGACCTGGAAGAGAGGCTCAAGAACCTTCGCAGGGACTGAAAACACCCC	7	-	11932243-11932253:11932254-11932292	7qA1	Mus musculus chromatin modifying protein 2A (Chmp2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1500016L11Rik	1500016L11Rik
Mus musculus	MEEBO	ILMN_213999	ILMN_213999	4921513O20RIK	scl47603.21_30	XM_283303.1			28486704	XM_283303.1	4921513O20Rik		ILMN_2643132	006130397	S	3329	ATTAATAAACGTTATAAAAAGATTAGGGGGAAGAGAGAAATACTCAAAAA										
Mus musculus	RefSeq	ILMN_213076	ILMN_255470	LOC640739	XM_925296.2	XM_925296.2		640739	94366899	XM_925296.2	LOC640739	XP_930389.1	ILMN_1229210	001990270	S	454	TAGCCTGAGGAGGCCACGAGCACCGCAGAGACTATGGCAGGGGATCTTTT					PREDICTED: Mus musculus hypothetical LOC640739 (LOC640739), mRNA.					
Mus musculus	RefSeq	ILMN_211333	ILMN_233597	DAB2IP	NM_001001602.1	NM_001001602.1		69601	48675374	NM_001001602.1	Dab2ip	NP_001001602.1	ILMN_2615559	001050040	S	6243	GGTTGGATCGGCCGGAGCCCTTTCCTCCAGTCGAGACTTTTAACCCTGTA	2	+	35586363-35586412	2qB	Mus musculus disabled homolog 2 (Drosophila) interacting protein (Dab2ip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310011D08Rik; AI480459; mKIAA1743; KIAA1743; MGC144147	2310011D08Rik; AI480459; mKIAA1743; KIAA1743; MGC144147
Mus musculus	RefSeq	ILMN_233597	ILMN_233597	DAB2IP	NM_001001602.1	NM_001001602.1		69601	48675374	NM_001001602.1	Dab2ip	NP_001001602.1	ILMN_2950503	006380424	S	6123	GGGAGCCAGACTGTCCAGGGAACCAGCCCCTCTTTTCTATATACTCGGCC	2	+	35586243-35586292	2qB	Mus musculus disabled homolog 2 (Drosophila) interacting protein (Dab2ip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310011D08Rik; AI480459; mKIAA1743; KIAA1743; MGC144147	2310011D08Rik; AI480459; mKIAA1743; KIAA1743; MGC144147
Mus musculus	RefSeq	ILMN_214418	ILMN_214418	TMEM168	NM_028990.3	NM_028990.3		101118	141803401	NM_028990.3	Tmem168	NP_083266.1	ILMN_2752345	002650424	S	4267	GGAGCTAGGCTCCCCTACCTAAGTGGAAAGGCATTGCTCTCTCTAGCTCT	6	-	13530920-13530969	6qA1	Mus musculus transmembrane protein 168 (Tmem168), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI504145; 5730526F17Rik; AI462344; 8430437G11Rik	AI504145; 5730526F17Rik; AI462344; 8430437G11Rik
Mus musculus	RefSeq	ILMN_214418	ILMN_214418	TMEM168	NM_028990.3	NM_028990.3		101118	141803401	NM_028990.3	Tmem168	NP_083266.1	ILMN_1249517	006860689	S	875	GGTGGAGAAGTCTCTGAGTGTTATTTTGCTGGTTATGGCTTTGGCCATGC	6	-	13552797-13552846	6qA1	Mus musculus transmembrane protein 168 (Tmem168), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI504145; 5730526F17Rik; AI462344; 8430437G11Rik	AI504145; 5730526F17Rik; AI462344; 8430437G11Rik
Mus musculus	MEEBO	ILMN_213275	ILMN_213275	BRP17	scl000778.1_76	NM_019999.1			9910441	NM_019999.1	Brp17		ILMN_2731550	005550414	S	2661	AGGCTACCTCTGCACCTGTAAATGCTTCTCTCGTGGCACCTATCACACCG										
Mus musculus	RefSeq	ILMN_210845	ILMN_210845	SEC61B	NM_024171.2	NM_024171.2		66212	142378097	NM_024171.2	Sec61b	NP_077133.1	ILMN_2609807	001710731	S	4	GCCTGTATCTACGAGAGTTCTGAGTGCTCGGCAACTTCACGACTTCCCTC	4	+	47487536-47487585	4qB1	Mus musculus Sec61 beta subunit (Sec61b), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any part of a ribosome [goid 43022] [evidence IDA]	AI326121; AW122942; 1190006C12Rik; MGC102034	AI326121; AW122942; 1190006C12Rik; MGC102034
Mus musculus	RefSeq	ILMN_216250	ILMN_216250	1500032D16RIK	NM_030087.2	NM_030087.2		78330	140972308	NM_030087.2	1500032D16Rik	NP_084363.2	ILMN_2688822	007200195	S	502	CGGGGTTCTGACTCAAAGGCTCAGGGGCACGTGCAGAAAGTGACAAACGA	17	+	31664485-31664534	17qB1	Mus musculus RIKEN cDNA 1500032D16 gene (1500032D16Rik), transcript variant 1, mRNA.					
Mus musculus	Riken	ILMN_204841	ILMN_204841	A130023E24RIK	ri|A130023E24|PX00122B19|AK037522|2270					AK037522	A130023E24Rik		ILMN_1228715	006860279	S	2075	GGAGTGGGCCAACAGTGACAGAAGCCCAGACCTGTGTCTCATTAACACTG										
Mus musculus	RefSeq	ILMN_210322	ILMN_249943	EG545216	XM_914705.3	XM_914705.3		545216	149269393	XM_914705.3	EG545216	XP_919798.3	ILMN_2604423	001170634	S	1416	CTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGACTT				17qD	PREDICTED: Mus musculus predicted gene, EG545216 (EG545216), mRNA.					
Mus musculus	RefSeq	ILMN_211806	ILMN_211806	D230025D16RIK	NM_145604.1	NM_145604.1		234678	21704215	NM_145604.1	D230025D16Rik	NP_663579.1	ILMN_2651918	005820673	S	606	CCCATGGAGCAACTGTAAAACGAATGTACATCTATAGTGGGAACAGCCTC	8	+	107764778-107764827	8qD3	Mus musculus RIKEN cDNA D230025D16 gene (D230025D16Rik), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISO]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence ISO]	The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane [goid 43001] [evidence ISO]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]	MGC6480; BC006874; Lin10	MGC6480; BC006874; Lin10
Mus musculus	RefSeq	ILMN_222310	ILMN_222310	CRLF1	NM_018827.2	NM_018827.2		12931	118130761	NM_018827.2	Crlf1	NP_061297.1	ILMN_2747811	003780450	S	1433	GACCTGGAGGCTCACCTGAATTGGAGCCCCTCTGTACCATCTGGGCAACA	8	+	73027767-73027816	8qB3.3	Mus musculus cytokine receptor-like factor 1 (Crlf1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CRLM3; CLF-1; NR6.1	CRLM3; CLF-1; NR6.1
Mus musculus	RefSeq	ILMN_196219	ILMN_259944	SLC9A2	NM_001033289.2	NM_001033289.2		226999	75832048	NM_001033289.2	Slc9a2	NP_001028461.2	ILMN_2729799	003990154	S	1851	GCATGCCATTGAAATGGCAGAGACAGGGATGATAAGCACTGTCCCCTCAT	1	+	40818845-40818894	1qB	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 2 (Slc9a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IDA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IDA]	NHE2; MGC124410; 2210416H12Rik; MGC124408; 4932415O19Rik; AV333884	NHE2; MGC124410; 2210416H12Rik; MGC124408; 4932415O19Rik; AV333884
Mus musculus	RefSeq	ILMN_215502	ILMN_215502	SPINK12	NM_030061.3	NM_030061.3		78242	142354206	NM_030061.3	Spink12	NP_084337.1	ILMN_2660373	004070367	S	415	TGGGGAAACTTGGTTTCAAACATGAAGGGAAATGCTGATTCTCGAACATC	18	+	44267721-44267758:44267759-44267770	18qB3	Mus musculus serine peptidase inhibitor, Kazal type 11 (Spink12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45861] [evidence IDA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of the serine endopeptidase trypsin [goid 30304] [evidence IDA]	9230117E20Rik	9230117E20Rik
Mus musculus	Riken	ILMN_205861	ILMN_205861	B130066D09RIK	ri|B130066D09|PX00158L11|AK045339|969					AK045339	B130066D09Rik		ILMN_1243461	001470327	S	513	TTGGTCGGGAATTCCAGCACATGCAGAAAAGGAAGGCTCTATAGCCATGC										
Mus musculus	RefSeq	ILMN_199266	ILMN_199266	LOC245109	XM_142517.3	XM_142517.3			38093573	XM_142517.3	LOC245109		ILMN_2534628	003990286	S	1149	GAGGAATTACCACAGATCTGACTGAACTATCTAACATCCTTAGCAGAGAC										
Mus musculus	RefSeq	ILMN_188881	ILMN_243863	2410131K14RIK	NM_001081236.1	NM_001081236.1		76792	124486988	NM_001081236.1	2410131K14Rik	NP_001074705.1	ILMN_1216547	007380240	S	257	AACCTCCTCCAGGTTCAAGACCGGGAACAGCCCATCCCGTGGAAGGTGCA	5	+	118705703-118705752	5qF	Mus musculus RIKEN cDNA 2410131K14 gene (2410131K14Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC129458; MGC129459	MGC129458; MGC129459
Mus musculus	RefSeq	ILMN_222399	ILMN_243863	2410131K14RIK	NM_001081236.1	NM_001081236.1		76792	124486988	NM_001081236.1	2410131K14Rik	NP_001074705.1	ILMN_1255447	004060296	S	2379	GTGAGTTTATAGTCTGTGCCGTCATGATCAAGAATCCAGTCTGCTCGTGC	5	+	118712832-118712881	5qF	Mus musculus RIKEN cDNA 2410131K14 gene (2410131K14Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC129458; MGC129459	MGC129458; MGC129459
Mus musculus	RefSeq	ILMN_189668	ILMN_252216	ARHGAP8	NM_028455.2	NM_028455.2		73167	142365448	NM_028455.2	Arhgap8	NP_082731.1	ILMN_1228093	000050168	S	1157	CCCTGAGCGCCCTGGTACCTCTGAACTTGTTCACAGAGCTGCTGATAGAG	15	+	84602305-84602354	15qE2	Mus musculus Rho GTPase activating protein 8 (Arhgap8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	AI430858	AI430858
Mus musculus	RefSeq	ILMN_220492	ILMN_236127	TTPAL	NM_029512.2	NM_029512.2		76080	112821701	NM_029512.2	Ttpal	NP_083788.2	ILMN_1257566	001260475	S	2655	TCTTTTAGGTCCTGGCTAAGCTTTAGGGCCAATATACCCCTCTTGACTGC	2	+	163442881-163442930	2qH3	Mus musculus tocopherol (alpha) transfer protein-like (Ttpal), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	3110080A02Rik	3110080A02Rik
Mus musculus	RefSeq	ILMN_220492	ILMN_236127	TTPAL	NM_029512.2	NM_029512.2		76080	112821701	NM_029512.2	Ttpal	NP_083788.2	ILMN_2722769	005290193	S	1902	GTGGCTGCTGAAGTTGTTAGGCTTCTGCTTGGGAAGACATTACCTAGAGG	2	+	163442128-163442177	2qH3	Mus musculus tocopherol (alpha) transfer protein-like (Ttpal), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	3110080A02Rik	3110080A02Rik
Mus musculus	RefSeq	ILMN_236127	ILMN_236127	TTPAL	NM_029512.2	NM_029512.2		76080	112821701	NM_029512.2	Ttpal	NP_083788.2	ILMN_3136789	004480747	A	4274	ACCCTCTCTGATGGGTGGGAACTGGGCTATTTTCCTGACCAGTCTAGGCC	2	+	163444500-163444549	2qH3	Mus musculus tocopherol (alpha) transfer protein-like (Ttpal), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	3110080A02Rik	3110080A02Rik
Mus musculus	RefSeq	ILMN_185869	ILMN_236127	TTPAL	NM_029512.2	NM_029512.2		76080	112821701	NM_029512.2	Ttpal	NP_083788.2	ILMN_2430704	007320168	S	4223	GGGCCCAACAGGTAAAATACTTGAAACTTCTCAGTGGCCAAGACCTCAGA	2	+	163444449-163444498	2qH3	Mus musculus tocopherol (alpha) transfer protein-like (Ttpal), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	3110080A02Rik	3110080A02Rik
Mus musculus	RefSeq	ILMN_222255	ILMN_222255	CARKD	NM_026995.3	NM_026995.3		69225	146141159	NM_026995.3	Carkd	NP_081271.1	ILMN_2746968	000510445	S	1062	CAGCAGGCTCTTCACGACCTGAACCTGTGCAGACTGGAGTGACAGACTGA				8qA1.1	Mus musculus carbohydrate kinase domain containing (Carkd), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810407E01Rik	2810407E01Rik
Mus musculus	RefSeq	ILMN_198024	ILMN_198024	LOC278041	XM_205152.2	XM_205152.2			38080474	XM_205152.2	LOC278041		ILMN_1239587	005670097	S	1337	TGGGGTATTTTCAGTAATGGCCACTATACTTGCCTGCATCCCCATGCGGA										
Mus musculus	Riken	ILMN_203993	ILMN_203993	A630038M18RIK	ri|A630038M18|PX00145F04|AK041797|1072					AK041797	A630038M18Rik		ILMN_1245951	001740202	S	750	CCTGAAGCTCAAACCCCAAATGACGTTCCTGCTCTGTTGCCTGTACCCTG										
Mus musculus	RefSeq	ILMN_212967	ILMN_235331	ATXN10	NM_016843.3	NM_016843.3		54138	142376666	NM_016843.3	Atxn10	NP_058539.2	ILMN_2771326	005130349	S	1459	AAGAGTGGGGATAAACTGATTCTGAAGTCTAATAATGACATCCCCCCGCC	15	+	85292847-85292896	15qE2	Mus musculus ataxin 10 (Atxn10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI325283; Tex169; TEG-169; Sca10; C77170; E46	AI325283; Tex169; TEG-169; Sca10; C77170; E46
Mus musculus	RefSeq	ILMN_220222	ILMN_220222	MFN1	NM_024200.3	NM_024200.3		67414	142351556	NM_024200.3	Mfn1	NP_077162.1	ILMN_1232014	006860523	S	1354	ACTGGACTTTATCCGAAACCAGATGAACCTTTTAACACTGGATGTTAAGA	3	+	32461973-32462022	3qA3	Mus musculus mitofusin 1 (Mfn1), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310002F04Rik; 6330416C07Rik; KIAA4032; HR2; mKIAA4032; D3Ertd265e	2310002F04Rik; 6330416C07Rik; KIAA4032; HR2; mKIAA4032; D3Ertd265e
Mus musculus	RefSeq	ILMN_223527	ILMN_315696	A330070K13RIK	XR_035384.1	XR_035384.1		381673	149254402	XR_035384.1	A330070K13Rik		ILMN_2765214	006960139	S	399	CACATCAGAGCCACTCAGAGTAGAGTGCCAACCATTGAAGGACCCCTGGG				5qG1.3	PREDICTED: Mus musculus RIKEN cDNA A330070K13 gene (A330070K13Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_186492	ILMN_186492	ULK2	NM_013881.3	NM_013881.3		29869	31982529	NM_013881.3	Ulk2	NP_038909.2	ILMN_1244059	000510692	S	3894	GCGTTCATGTGAACCTTTGCATTTTTCTCACCTGTTATCTTCACCAACAG	11	-	61590494-61590543	11qB2	Mus musculus Unc-51 like kinase 2 (C. elegans) (Ulk2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of collateral sprouting [goid 48671] [evidence IMP]; Long distance growth of a single process [goid 48675] [evidence IMP]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA0623; AU015340; Unc51.2; A830085I22Rik	mKIAA0623; AU015340; Unc51.2; A830085I22Rik
Mus musculus	RefSeq	ILMN_186492	ILMN_186492	ULK2	NM_013881.3	NM_013881.3		29869	31982529	NM_013881.3	Ulk2	NP_038909.2	ILMN_2496817	007550376	S	5034	GCTTGGAGAGGGTAAGGTTGGTGTGAAGACAGGAAGTAGGCAAGTGTTGA	11	-	61589354-61589403	11qB2	Mus musculus Unc-51 like kinase 2 (C. elegans) (Ulk2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of collateral sprouting [goid 48671] [evidence IMP]; Long distance growth of a single process [goid 48675] [evidence IMP]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA0623; AU015340; Unc51.2; A830085I22Rik	mKIAA0623; AU015340; Unc51.2; A830085I22Rik
Mus musculus	RefSeq	ILMN_219262	ILMN_219262	HMGB3	NM_008253.3	NM_008253.3		15354	133892877	NM_008253.3	Hmgb3	NP_032279.1	ILMN_1241213	006100474	S	1583	CTGTTATTTTTTGTATGTTTAGAATGCTGAAATGTTTTTGAAGTTAAATA	X	+	68813088-68813137	XqA7.2	Mus musculus high mobility group box 3 (Hmgb3), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of B cell differentiation [goid 45578] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Hmg4; Hmg2a	Hmg4; Hmg2a
Mus musculus	RefSeq	ILMN_216766	ILMN_216766	EPHA10	NM_177671.4	NM_177671.4		230735	142364312	NM_177671.4	Epha10	NP_808339.2	ILMN_2675125	006520326	S	1477	AGCGAAAGATGAAGCTGAACACAGAGGTGCGTGAGATCGGCCCCCTCAGC	4	+	124563107-124563156	4qD2.2	Mus musculus Eph receptor A10 (Epha10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	A330090H18	A330090H18
Mus musculus	RefSeq	ILMN_220336	ILMN_220336	BC025546	NM_146215.2	NM_146215.2		234728	31981919	NM_146215.2	BC025546	NP_666327.2	ILMN_2720763	002490170	S	3153	TGGTGTGCAGTCTCCTGTGGGTTACACCGGAGTGTGATGGTTGTGGCGAA	8	+	113113223-113113272	8qE1	Mus musculus cDNA sequence BC025546 (BC025546), mRNA.				MGC38131; AU022703; C730036L12Rik	MGC38131; AU022703; C730036L12Rik
Mus musculus	RefSeq	ILMN_201462	ILMN_201462	LOC385212	XM_358121.1	XM_358121.1			38094001	XM_358121.1	LOC385212		ILMN_1240801	005820110	S	652	CCTTTGACAGATCTAGAGGTGATGTTAGCGACCCCAAGGCTGGGGCAGCC										
Mus musculus	RefSeq	ILMN_200394	ILMN_200394	LOC381687	XM_355664.1	XM_355664.1			38081590	XM_355664.1	LOC381687		ILMN_1239982	004230685	S	481	GTTTTTCTGTCTTCACAAACCGGCGGGTAGTGATGGAACTTGACCCAGCA										
Mus musculus	RefSeq	ILMN_199281	ILMN_231016	LOC674008	XM_001006885.1	XM_001006885.1		674008	94412071	XM_001006885.1	LOC674008	XP_001006885.1	ILMN_1216697	003460528	S	882	CCAAAATGTGACCTCTCAGATAGACGGCATCCTGACCTCTCAGATAGACC					PREDICTED: Mus musculus similar to A-kinase anchor protein 5 (LOC674008), mRNA.					
Mus musculus	RefSeq	ILMN_199697	ILMN_199697	LOC383833	XM_357282.1	XM_357282.1			38076207	XM_357282.1	LOC383833		ILMN_1214072	005910021	S	400	GGGGGAGGCACTCAGTTGTATGTCTGTGTTAGCCCCTGTGGAAGCAAAGC										
Mus musculus	RefSeq	ILMN_211629	ILMN_234604	DIS3L	NM_001001295.1	NM_001001295.1		213550	47604967	NM_001001295.1	Dis3l	NP_001001295.1	ILMN_1227726	002350170	S	3167	GGAGGAGATAAGGGACCTAGCTCTTCTGGATGTCTCTGACAGTTGTGCAA	9	-	64154854-64154903	9qC	Mus musculus DIS3 mitotic control homolog (S. cerevisiae)-like (Dis3l), transcript variant 1, mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]	AV340375	AV340375
Mus musculus	MEEBO	ILMN_191332	ILMN_191332	2700050L05RIK	scl31960.11.1_24				22122450	NM_145995	2700050L05Rik		ILMN_2478218	004560722	S	9	CTCACGACTCTGTGTGAAGAAACTGAAGACAAGTACCAGAACCCATTCAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_192542	ILMN_233346	LOC665566	XM_977814.1	XM_977814.1		665566	94372164	XM_977814.1	LOC665566	XP_982908.1	ILMN_2489047	005050689	S	3484	CAGACACATGGGCTTGACGCTGGGGAATTGCTTACAAAGCACGCAGTCAT	4	+	105858703-105858752		PREDICTED: Mus musculus similar to Probable ubiquitin carboxyl-terminal hydrolase FAF-X (Ubiquitin thiolesterase FAF-X) (Ubiquitin-specific-processing protease FAF-X) (Deubiquitinating enzyme FAF-X) (Fat facets protein-related, X-linked) (Ubiquitin-specific protease 9, X ... (LOC665566), mRNA.					
Mus musculus	RefSeq	ILMN_213235	ILMN_213235	NUPL1	NM_170591.1	NM_170591.1		71844	24497430	NM_170591.1	Nupl1	NP_733479.1	ILMN_2872537	001240176	S	2273	GTTTGTTCCTTGACAAGGCCTTTTGAACTGTGCTGCAGGGCATCTTGTGG	14	-	60838376-60838425	14qD1	Mus musculus nucleoporin like 1 (Nupl1), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700017F11Rik; mKIAA0410	1700017F11Rik; mKIAA0410
Mus musculus	RefSeq	ILMN_213235	ILMN_213235	NUPL1	NM_170591.1	NM_170591.1		71844	24497430	NM_170591.1	Nupl1	NP_733479.1	ILMN_1245500	006370114	S	1413	GAGTTACTACTGGACCCACTCCTTTCAGCACCATGCCAAACGCAGCAGCC	14	-	60847591-60847640	14qD1	Mus musculus nucleoporin like 1 (Nupl1), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700017F11Rik; mKIAA0410	1700017F11Rik; mKIAA0410
Mus musculus	RefSeq	ILMN_213235	ILMN_213235	NUPL1	NM_170591.1	NM_170591.1		71844	24497430	NM_170591.1	Nupl1	NP_733479.1	ILMN_2635024	006900553	S	2218	TGCACATTGGTTTCTTATGCAGATGGTATAAACTCTAGGGCCTGTGCTAG	14	-	60838431-60838480	14qD1	Mus musculus nucleoporin like 1 (Nupl1), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700017F11Rik; mKIAA0410	1700017F11Rik; mKIAA0410
Mus musculus	RefSeq	ILMN_218872	ILMN_218872	ES1	NM_007954.2	NM_007954.2		13884	142348402	NM_007954.2	Es1	NP_031980.1	ILMN_1235564	001510092	S	1774	CTGCACAATAGTACAGTATCACAATTTGAAAATAAATTTCCTTTTAGAAA	8	-	95622918-95622967	8qC5	Mus musculus esterase 1 (Es1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IDA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Es-4; Es-1; Ee-1; Es-N	Es-4; Es-1; Ee-1; Es-N
Mus musculus	RefSeq	ILMN_193122	ILMN_193503	CREBZF	NM_145151.2	NM_145151.2		233490	122056688	NM_145151.2	Crebzf	NP_660133.2	ILMN_1220787	006290010	S	2726	ATAAGGAAACAGAGGTAATATCAGGGCTTCTGCTGTCTTTTATTTTTAAA	7	+	97594016-97594065	7qE1	Mus musculus CREB/ATF bZIP transcription factor (Crebzf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	LAZipII; LAZip; 1110034C16Rik; AI606244; Zf	LAZipII; LAZip; 1110034C16Rik; AI606244; Zf
Mus musculus	Riken	ILMN_203964	ILMN_203964	A530031I11RIK	ri|A530031I11|PX00140C22|AK040863|1308					AK040863	A530031I11Rik		ILMN_1226933	006620224	S	1184	GGCGGCAACCCTGTATCTGCCAGCCCGTTCATGCGTTTAAAGAGCCACTA										
Mus musculus	MEEBO	ILMN_218681	ILMN_218681	EHD2	scl36563.1.1_32	NM_153068.1			23346468	NM_153068.1	Ehd2		ILMN_2698921	001470435	S	2469	TATTTAAAAACTTTAGAGATAAATGAAAACGGATGTCACAACAAATGCAC						A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]		
Mus musculus	RefSeq	ILMN_185615	ILMN_255958	FXR2	NM_011814.2	NM_011814.2		23879	83921588	NM_011814.2	Fxr2	NP_035944.2	ILMN_1230048	006020324	S	2873	GGGGAGTTGGGAGGAAATAACCTTGTCTGGTGGATGAGAAGGCGTATTTA	11	+	69466702-69466751	11qB3	Mus musculus fragile X mental retardation, autosomal homolog 2 (Fxr2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fxr2h	Fxr2h
Mus musculus	RefSeq	ILMN_185615	ILMN_255958	FXR2	NM_011814.2	NM_011814.2		23879	83921588	NM_011814.2	Fxr2	NP_035944.2	ILMN_1260445	004830215	S	2260	CTCTTTCAGGACAGAAGGGTGACTCTGTCAGCAAGCTTCCCAAGGGCCCC	11	+	69465793-69465809:69466106-69466138	11qB3	Mus musculus fragile X mental retardation, autosomal homolog 2 (Fxr2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fxr2h	Fxr2h
Mus musculus	RefSeq	ILMN_191674	ILMN_191674	UCP2	NM_011671.3	NM_011671.3		22228	141801756	NM_011671.3	Ucp2	NP_035801.2	ILMN_2481182	004920594	S	3710	GCCCAGGAATCTGACCGAAGGCCCACATTTGACTGTTAAAATGAGATGCT	7	+	107650278-107650327	7qE3	Mus musculus uncoupling protein 2 (mitochondrial, proton carrier) (Ucp2), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Slc25a8	Slc25a8
Mus musculus	Riken	ILMN_201945	ILMN_201945	ERAL1	ri|9130407C09|PX00026K18|AK018664|908					AK018664	Eral1		ILMN_1231263	000510670	S	526	TAAACCTGAGCCCAAGGAGAGGCGAGTGGAGAAGGCTGTCAAAGAGTTTG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_200803	ILMN_254037	LOC672264	XM_992203.1	XM_992203.1		672264	94381951	XM_992203.1	LOC672264	XP_997297.1	ILMN_1219498	005870524	S	2380	GCGTCATCCAACCAGGCCATGCCAGTGAGTGGAGCATCAATCAACCAGGC					PREDICTED: Mus musculus similar to CG32656-PA (LOC672264), mRNA.					
Mus musculus	MEEBO	ILMN_188618	ILMN_188618	UNC5C	scl0319658.1_5				6678504	NM_009472	Unc5c		ILMN_2461665	000020630	S	7	TTTCCTAATGACCCCCAGTGGCTGCGGAGTGCTCTCCAGCATTCTGCTCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A transmembrane receptor activity that responds to the netrin family of ligands and results in chemotaxis when activated [goid 5042] [evidence IDA]		
Mus musculus	MEEBO	ILMN_188618	ILMN_188618	UNC5C	scl0319658.1_5				6678504	NM_009472	Unc5c		ILMN_2454223	002510291	S	20	AGCCAAATTTGATGGCTACTCTCTCATATATGGCTCAGCTGGGAGACAAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A transmembrane receptor activity that responds to the netrin family of ligands and results in chemotaxis when activated [goid 5042] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213401	ILMN_213401	GCS1	NM_020619.2	NM_020619.2		57377	31981105	NM_020619.2	Gcs1	NP_065644.2	ILMN_1255453	005860767	S	2591	GGAAAGCTAGGCCATTTGTGTCACTTGGAATATGCAGACAAGGGCTTGGG	6	+	83068713-83068762	6qC3	Mus musculus glucosidase 1 (Gcs1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the exohydrolysis of the non-reducing terminal glucose residue in the mannosyl-oligosaccharide Glc(3)Man(9)GlcNAc(2) [goid 4573] [evidence IEA]	1810017N02Rik; AI181835	1810017N02Rik; AI181835
Mus musculus	Riken	ILMN_205070	ILMN_205070	D330037H01RIK	ri|D330037H01|PX00192A04|AK052357|3327					AK052357	D330037H01Rik		ILMN_1256596	003440494	S	1170	GAACATGCGGGGCCAGAGAGACAGCTCAGTGGTTAAAAGCGCTGGTTCTC										
Mus musculus	RefSeq	ILMN_229280	ILMN_229280	OTTMUSG00000005523	NM_001045540.1	NM_001045540.1		620913	113865922	NM_001045540.1	OTTMUSG00000005523	NP_001039005.1	ILMN_2847773	004210349	S	4939	CCCCTCTTCTGTAAGAGAGAAAGACTCTGAGGCCAGGCTAGTGCAGGAGC	11	-	48718433-48718482	11qB1.2	Mus musculus predicted gene, OTTMUSG00000005523 (OTTMUSG00000005523), mRNA.				Rp23-14f5.7; MGC6071	Rp23-14f5.7; MGC6071
Mus musculus	RefSeq	ILMN_188131	ILMN_247934	RAB11A	NM_017382.4	NM_017382.4		53869	142373351	NM_017382.4	Rab11a	NP_059078.2	ILMN_1230413	001010110	S	1022	GTTCTCAGTTATTGTTTACTCTTCATCATGGAAGCCTGTCACTGTAGGAC	9	-	64569527-64569576	9qC	Mus musculus RAB11a, member RAS oncogene family (Rab11a), mRNA.	The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212911	ILMN_212911	9430023L20RIK	NM_026566.2	NM_026566.2		68118	142362390	NM_026566.2	9430023L20Rik	NP_080842.1	ILMN_1238679	001410730	S	1143	CCTGGATGCAGCCTTTCCACCTGCTCTGGTGGGGTTCAAGTTCTACACTG	15	+	101121278-101121327	15qF2	Mus musculus RIKEN cDNA 9430023L20 gene (9430023L20Rik), mRNA.				AA407441; AU022967	AA407441; AU022967
Mus musculus	MEEBO	ILMN_196120	ILMN_196120	STK33	scl36235.1.1_130				51761835	XM_358897	Stk33		ILMN_1242818	004860129	S	14	GGAGTGGTGGGGTGGAGCTATTTTCCTAGTTATATGCCCAAAGACTGGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_246572	ILMN_246572	CEP97	NM_028815.3	NM_028815.3		74201	45433567	NM_028815.3	Cep97	NP_083091.1	ILMN_2848828	000020553	S	5307	CTGCAGAGGCATAAACTTGTACCACATAGGCAGGCAAGACTGGCACATGC	16	-	55902548-55902597	16qC1.1	Mus musculus centrosomal protein 97 (Cep97), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA437768; E130116N02Rik; 4932439K18Rik; 2810403B08Rik	AA437768; E130116N02Rik; 4932439K18Rik; 2810403B08Rik
Mus musculus	RefSeq	ILMN_192820	ILMN_246572	CEP97	NM_028815.3	NM_028815.3		74201	45433567	NM_028815.3	Cep97	NP_083091.1	ILMN_1230717	005560300	S	2640	AAATTCAATTCGATTTTCTTATGTTTTCAAGTGTCTCTTTTGCAGGGGAG	16	-	55905215-55905264	16qC1.1	Mus musculus centrosomal protein 97 (Cep97), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA437768; E130116N02Rik; 4932439K18Rik; 2810403B08Rik	AA437768; E130116N02Rik; 4932439K18Rik; 2810403B08Rik
Mus musculus	MEEBO	ILMN_193377	ILMN_193377	2310004I03RIK	scl7469.1.1_188						2310004I03Rik		ILMN_1245869	006590113	S	19	GGTGGAGGTCTTTGAGTTAAGCACTTAAAGTGCCTGCTGTCTCAGCACTG										
Mus musculus	RefSeq	ILMN_222043	ILMN_222043	IRF2	NM_008391.3	NM_008391.3		16363	142363638	NM_008391.3	Irf2	NP_032417.2	ILMN_1251696	000270709	S	2286	TAAGATTCCTTTTCCTGTTCATCAGCAGTTGTTATTACATCCCTTGTGGC	8	+	47932644-47932693	8qB1.1	Mus musculus interferon regulatory factor 2 (Irf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	MGC117893; Irf-2; 9830146E22Rik; AI646973	MGC117893; Irf-2; 9830146E22Rik; AI646973
Mus musculus	RefSeq	ILMN_217716	ILMN_217716	SH3MD4	NM_172788.2	NM_172788.2		237353	40254251	NM_172788.2	Sh3md4	NP_766376.1	ILMN_2686733	005900139	S	2730	TACGGCACACCTTTTTAATGTACAACTCTTAGACTTTATATATTTCTAAT	10	+	58599381-58599430	10qB4	Mus musculus SH3 multiple domains 4 (Sh3md4), mRNA.				4831416G18Rik	4831416G18Rik
Mus musculus	RefSeq	ILMN_217716	ILMN_217716	SH3MD4	NM_172788.2	NM_172788.2		237353	40254251	NM_172788.2	Sh3md4	NP_766376.1	ILMN_2897748	005670468	S	4810	CAAGGCGGAGCACCCCAAAATCAGCCCAGTAGATGTGGAAGCCCTTGTAC	10	+	58601461-58601510	10qB4	Mus musculus SH3 multiple domains 4 (Sh3md4), mRNA.				4831416G18Rik	4831416G18Rik
Mus musculus	RefSeq	ILMN_217716	ILMN_217716	SH3MD4	NM_172788.2	NM_172788.2		237353	40254251	NM_172788.2	Sh3md4	NP_766376.1	ILMN_2754881	002070369	S	4776	GAGAGACAAGATGGTCCATAGTGAGGCGTAAATACAAGGCGGAGCACCCC	10	+	58601427-58601476	10qB4	Mus musculus SH3 multiple domains 4 (Sh3md4), mRNA.				4831416G18Rik	4831416G18Rik
Mus musculus	RefSeq	ILMN_219214	ILMN_219214	GSTM5	NM_010360.2	NM_010360.2		14866	133892313	NM_010360.2	Gstm5	NP_034490.1	ILMN_2705777	001570102	S	489	ACTTGGAACAGCTACCTGCACAGCTGAAACAATTCTCATTGTTCCTGGGG	3	+	107695903-107695952	3qF2.3	Mus musculus glutathione S-transferase, mu 5 (Gstm5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221945	ILMN_239476	LOC668433	XM_001003627.1	XM_001003627.1		668433	94390544	XM_001003627.1	LOC668433	XP_001003627.1	ILMN_2742451	001170014	S	548	AGAATGGGGGAACAGATAATCCATCACTGTCCCAGTCCAACCCTGTGTCC				11qB3	PREDICTED: Mus musculus hypothetical LOC668433 (LOC668433), mRNA.					
Mus musculus	RefSeq	ILMN_197166	ILMN_197166	LOC238564	XM_111421.2	XM_111421.2			38074388	XM_111421.2	LOC238564		ILMN_1233311	002630441	S	2005	CCTGCAGAAGAGAGCTGCCAAGGAGGCAGTGCTGAAACCTTCCAGGAGTC										
Mus musculus	MEEBO	ILMN_218579	ILMN_218579	A630026F04	scl53838.1.496_260	NM_183319.1			34303998	NM_183319.1	A630026F04		ILMN_1213039	006370390	S	2814	GCAATATACCAAATTAGCAAGTGAAGAGGATGCAAGCACTTAGCCCTCAG										
Mus musculus	RefSeq	ILMN_259739	ILMN_259739	GHR	NM_001048178.1	NM_001048178.1		14600	114520604	NM_001048178.1	Ghr	NP_001041643.1	ILMN_3138922	002710068	A	628	TGGATACCCTACTGCATCAAGCTAACTACAAATGGTGATTTGCTGGACCA	15	-	3290944-3290993	15qA1	Mus musculus growth hormone receptor (Ghr), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with any peptide with hormonal activity in animals [goid 17046] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with growth hormone to initiate a change in cell activity [goid 4903] [evidence IDA]	GHBP; AA986417; GHR/BP	GHBP; AA986417; GHR/BP
Mus musculus	RefSeq	ILMN_223583	ILMN_223583	GFRA1	NM_010279.2	NM_010279.2		14585	34328183	NM_010279.2	Gfra1	NP_034409.1	ILMN_2893409	006450450	S	2874	GGAAGGTGAACTGAATGGCACAAGTACACAGAGCAGGAGGGGACGCTCGA	19	-	58311482-58311531	19qD2	Mus musculus glial cell line derived neurotrophic factor family receptor alpha 1 (Gfra1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence TAS]	The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence TAS]	AU042498	AU042498
Mus musculus	RefSeq	ILMN_220191	ILMN_317934	1600012H06RIK	NM_001083882.1	NM_001083882.1		67912	139949023	NM_001083882.1	1600012H06Rik	NP_001077351.1	ILMN_2718861	004830291	S	1735	CCTGGGGAAATGAGCCATTTCTCTGACTTTGTTTCAAGGGTAGAAGTTGC	17	+	15081923-15081972	17qA2	Mus musculus RIKEN cDNA 1600012H06 gene (1600012H06Rik), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_220191	ILMN_317934	1600012H06RIK	NM_001083882.1	NM_001083882.1		67912	139949023	NM_001083882.1	1600012H06Rik	NP_001077351.1	ILMN_1238211	006940168	S	2565	AATTGCACAATTACCTGTATAATGTTTTAATAGAATTACTGTGATTTACT	17	+	15082753-15082802	17qA2	Mus musculus RIKEN cDNA 1600012H06 gene (1600012H06Rik), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_194477	ILMN_317934	1600012H06RIK	NM_001083882.1	NM_001083882.1		67912	139949023	NM_001083882.1	1600012H06Rik	NP_001077351.1	ILMN_2506772	005050433	S	2613	GTAAATCACAGTAATTCTATTAAAACATTATACAGGTAATTGTGCAATTT	17	+	15082801-15082850	17qA2	Mus musculus RIKEN cDNA 1600012H06 gene (1600012H06Rik), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215578	ILMN_245747	SUCLG2	XM_985084.1	XM_985084.1		20917	94378913	XM_985084.1	Suclg2	XP_990178.1	ILMN_1234619	007000274	S	3288	CCCCGATGTTGTACCAGTATCATGCCTGTATCCTGAAGTGTGTGGAACGG				6qD2	PREDICTED: Mus musculus succinate-Coenzyme A ligase, GDP-forming, beta subunit (Suclg2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate [goid 4776] [evidence IEA]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [evidence ISA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215578	ILMN_245747	SUCLG2	XM_985084.1	XM_985084.1		20917	94378913	XM_985084.1	Suclg2	XP_990178.1	ILMN_2743139	002370091	S	3388	CCTAAGTCCCCCTATGTGCCCTACTCTGGTGTGTCCCATGTCTTGAATTT				6qD2	PREDICTED: Mus musculus succinate-Coenzyme A ligase, GDP-forming, beta subunit (Suclg2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate [goid 4776] [evidence IEA]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [evidence ISA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_226308	ILMN_226308	PFKP	NM_019703.2	NM_019703.2		56421	31543472	NM_019703.2	Pfkp	NP_062677.1	ILMN_2807702	004040097	S	3554	GCATGCAGTGGCCATAGAGTCCTGAAGAGGACATCAGATCCCTGGAACCT	13	-	6579502-6579551	13qA1	Mus musculus phosphofructokinase, platelet (Pfkp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence ISS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	9330125N24Rik; PFK-C; 1200015H23Rik	9330125N24Rik; PFK-C; 1200015H23Rik
Mus musculus	RefSeq	ILMN_196484	ILMN_243764	CTTNBP2	NM_080285.1	NM_080285.1		30785	91982737	NM_080285.1	Cttnbp2	NP_525024.1	ILMN_1242097	002070433	S	227	GCGTGATGGAAGGTGAACTAGAAGCCAGAGACCTGGTGATTGAGGCCCTG	6	-	18451951-18452000	6qA2	Mus musculus cortactin binding protein 2 (Cttnbp2), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISO]	Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence ISO]	mKIAA1758; 6430526E05; 3010022N24Rik; ORF4; Cortbp2; 9130022E09Rik; AU040881; 4732477G22Rik	mKIAA1758; 6430526E05; 3010022N24Rik; ORF4; Cortbp2; 9130022E09Rik; AU040881; 4732477G22Rik
Mus musculus	RefSeq	ILMN_223444	ILMN_243764	CTTNBP2	NM_080285.1	NM_080285.1		30785	91982737	NM_080285.1	Cttnbp2	NP_525024.1	ILMN_1234350	004200368	S	5632	GTATATATATATTTACTCTTCTGAGTTTGCATTTATGACTTGTAAAATAT	6	-	18319575-18319624	6qA2	Mus musculus cortactin binding protein 2 (Cttnbp2), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISO]	Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence ISO]	mKIAA1758; 6430526E05; 3010022N24Rik; ORF4; Cortbp2; 9130022E09Rik; AU040881; 4732477G22Rik	mKIAA1758; 6430526E05; 3010022N24Rik; ORF4; Cortbp2; 9130022E09Rik; AU040881; 4732477G22Rik
Mus musculus	RefSeq	ILMN_212459	ILMN_249238	RANBP3	NM_027933.2	NM_027933.2		71810	117676380	NM_027933.2	Ranbp3	NP_082209.1	ILMN_1237007	000050398	S	1171	CCGGGGACTTCTCAGGCTCAATGACATGGCGTCAACCGACGATGGCACAT	17	+	56848693-56848742	17qD	Mus musculus RAN binding protein 3 (Ranbp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence IEA]		AA408221; 2610024N24Rik	AA408221; 2610024N24Rik
Mus musculus	Riken	ILMN_201924	ILMN_201924	MOR, GPCR	ri|4933433E02|PX00021O14|AK017036|1394					AK017036	MOR, GPCR		ILMN_1214501	006510326	S	647	ACATTGGGTGGTGCAGAGGACCTCCTTCTGGCCTTCATGGCCTATGATAG										
Mus musculus	RefSeq	ILMN_219477	ILMN_219477	GEMIN7	NM_027189.2	NM_027189.2		69731	141801804	NM_027189.2	Gemin7	NP_081465.1	ILMN_1249986	005050112	S	190	AGAGTCACAGGAACAGCGGGCCCGAGCCACTCTGCGAGAGCGCTACCTCC	7	-	20150821-20150870	7qA3	Mus musculus gem (nuclear organelle) associated protein 7 (Gemin7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI461688; AI120175; 2400008I04Rik	AI461688; AI120175; 2400008I04Rik
Mus musculus	RefSeq	ILMN_187973	ILMN_242693	RNF148	XM_889230.2	XM_889230.2		71300	94377054	XM_889230.2	Rnf148	XP_894323.1	ILMN_2448740	006200736	S	907	CAGGACGGAGATAAGGAGTTAGACCCGAATGAAGACAGCTGCGTGGTTTG	6	-	23604180-23604229	6qA3.1	PREDICTED: Mus musculus ring finger protein 148 (Rnf148), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212856	ILMN_212856	SLC10A4	NM_173403.2	NM_173403.2		231290	87044891	NM_173403.2	Slc10a4	NP_775579.2	ILMN_1251845	001090564	S	1916	CGACAGGATAGCATTGCATCGTCAAACCACTCTCAAGCCAGAGAAAATCA	5	+	73404025-73404074	5qC3.2	Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 4 (Slc10a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	E130304D01	E130304D01
Mus musculus	RefSeq	ILMN_212856	ILMN_212856	SLC10A4	NM_173403.2	NM_173403.2		231290	87044891	NM_173403.2	Slc10a4	NP_775579.2	ILMN_2631057	002680288	S	217	TGACAACCTCACCCTGTCTCCCAACGCCGGCAGCCCGAGCGCCAGCACCC	5	+	73398359-73398408	5qC3.2	Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 4 (Slc10a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	E130304D01	E130304D01
Mus musculus	RefSeq	ILMN_200313	ILMN_200313	LOC386200	XM_359117.1	XM_359117.1			38081286	XM_359117.1	LOC386200		ILMN_2538325	006200735	S	494	CCCTGAGTGAGGTAACCCAGACCCAAAAGGATACTCAGGGTGTGTACTCA										
Mus musculus	RefSeq	ILMN_199355	ILMN_199355	LOC386411	XM_359214.1	XM_359214.1			38081558	XM_359214.1	LOC386411		ILMN_1255136	000730044	S	588	GGCATCATATGACCTCTTCTTCAGTCTCAGGCTTGTACCAGATGCCCTGG										
Mus musculus	RefSeq	ILMN_222709	ILMN_222709	OLFR1123	NM_146350.2	NM_146350.2		258347	121583710	NM_146350.2	Olfr1123	NP_666462.2	ILMN_1235323	000380592	S	816	CTTACAACCCAAGCCAAATCAATCAGAAATAACTGGAAAACTGTTGTCTC	2	+	87259022-87259071	2qD	Mus musculus olfactory receptor 1123 (Olfr1123), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR264-17	MOR264-17
Mus musculus	RefSeq	ILMN_223665	ILMN_223665	CAPN1	NM_007600.2	NM_007600.2		12333	31982478	NM_007600.2	Capn1	NP_031626.1	ILMN_2767401	000270537	S	2863	CTCTCTTTTTTTGTATATATACTGGTCATTTTCAAGGGAATGCCTGAGGG	19	-	5988637-5988686	19qA	Mus musculus calpain 1 (Capn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence TAS]	mu-calpin; Capa-1; Capa1	mu-calpin; Capa-1; Capa1
Mus musculus	RefSeq	ILMN_223665	ILMN_223665	CAPN1	NM_007600.2	NM_007600.2		12333	31982478	NM_007600.2	Capn1	NP_031626.1	ILMN_2981550	005690021	S	2895	TCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGG	19	-	5988605-5988654	19qA	Mus musculus calpain 1 (Capn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence TAS]	mu-calpin; Capa-1; Capa1	mu-calpin; Capa-1; Capa1
Mus musculus	MEEBO	ILMN_188608	ILMN_188608	FBXO15	scl51712.12.87_136						Fbxo15		ILMN_2454150	003060019	S	7	GAGGAGTGTGCGCAGACCTAGGGTGGTTTGAAAATACCGATGAATACTTC						A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1) [goid 19005] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IC ]		
Mus musculus	RefSeq	ILMN_199483	ILMN_199483	LOC382598	XM_356588.1	XM_356588.1			38050524	XM_356588.1	LOC382598		ILMN_1245290	004180274	S	288	AGCCTCGGGTCAGGGCTGGGAGAAGAAGGGACACCAGAATGCTGAGCAGC										
Mus musculus	RefSeq	ILMN_210540	ILMN_210540	GFI1	NM_010278.1	NM_010278.1		14581	6753973	NM_010278.1	Gfi1	NP_034408.1	ILMN_2790382	007040446	S	2661	GGGACTTTATTAGATGCCTGCGCTGGGAGATGTGGGGTGAAGCTATGGCC	5	-	107957109-107957158	5qF	Mus musculus growth factor independent 1 (Gfi1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Behavior that is dependent upon the sensation of a mechanical stimulus [goid 7638] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that restricts, stops or prevents a cell from adopting a specific cell fate [goid 9996] [evidence IMP]; Any process that activates or enables a cell to adopt a specific fate [goid 42660] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Pal1; Pal-1; AW495828	Pal1; Pal-1; AW495828
Mus musculus	RefSeq	ILMN_255922	ILMN_255922	ZFP488	NM_001013777.1	NM_001013777.1		382867	85701467	NM_001013777.1	Zfp488	NP_001013799.1	ILMN_2808383	002600411	S	2952	CCCTCAGAATAAGCATGCTGGGTTCCCAGGTGTCCTCTGGAAGTCCCACC	14	-	34781555-34781604	14qB	Mus musculus zinc finger protein 488 (Zfp488), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation [goid 48714] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gm1206	Gm1206
Mus musculus	RefSeq	ILMN_196469	ILMN_196469	A730013O20	XM_284165.2	XM_284165.2			38081596	XM_284165.2	A730013O20		ILMN_1238123	006760142	S	2469	CCTGGCAAGCAGCTGCCGATACTAAGTAAGGAAATAGCGTTCCATCCCAC										
Mus musculus	RefSeq	ILMN_250019	ILMN_250019	CXXC4	NM_001004367.2	NM_001004367.2		319478	52345427	NM_001004367.2	Cxxc4	NP_001004367.1	ILMN_3048058	004390064	I	4561	CATGGGCCACCAAGTGTACTCCGTTCCCAGTGTCCTCCCGTTCTGAACTG	3	+	133924779-133924828	3qG3	Mus musculus CXXC finger 4 (Cxxc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC90862; C030003J12Rik; Idax; 9330210J02Rik	MGC90862; C030003J12Rik; Idax; 9330210J02Rik
Mus musculus	RefSeq	ILMN_250019	ILMN_250019	CXXC4	NM_001004367.2	NM_001004367.2		319478	52345427	NM_001004367.2	Cxxc4	NP_001004367.1	ILMN_3123909	006560398	A	647	AGAAGAGGAAAAGGTGTGGGGTCTGCGTGCCCTGCAAGAGGCTCATCAAC	3	+	133903528-133903577	3qG3	Mus musculus CXXC finger 4 (Cxxc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC90862; C030003J12Rik; Idax; 9330210J02Rik	MGC90862; C030003J12Rik; Idax; 9330210J02Rik
Mus musculus	RefSeq	ILMN_247004	ILMN_247004	BRSK2	NM_001009929.2	NM_001009929.2		75770	118131126	NM_001009929.2	Brsk2	NP_001009929.1	ILMN_3036891	004670020	I	1977	TGCTGGGCTTAAGGGCCAGAAGGTGGCCACCAGCTACGAGAGTAGCCTCT	7	+	149184859-149184908	7qF5	Mus musculus BR serine/threonine kinase 2 (Brsk2), transcript variant 2, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; The specification and formation of anisotropic intracellular organization or cell growth patterns [goid 30010] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IC ]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IC ]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	SAD-A; SADA; 4833424K13Rik	SAD-A; SADA; 4833424K13Rik
Mus musculus	RefSeq	ILMN_247004	ILMN_247004	BRSK2	NM_001009929.2	NM_001009929.2		75770	118131126	NM_001009929.2	Brsk2	NP_001009929.1	ILMN_3110964	007650358	A	1817	ATGGCATCTACTCAGTCACATTCACTTTACTCTCAGGCCCCAGTCGCCGC	7	+	149184428-149184463:149184538-149184551	7qF5	Mus musculus BR serine/threonine kinase 2 (Brsk2), transcript variant 2, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; The specification and formation of anisotropic intracellular organization or cell growth patterns [goid 30010] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IC ]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IC ]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	SAD-A; SADA; 4833424K13Rik	SAD-A; SADA; 4833424K13Rik
Mus musculus	RefSeq	ILMN_217503	ILMN_217503	CFL2	NM_007688.2	NM_007688.2		12632	126513132	NM_007688.2	Cfl2	NP_031714.1	ILMN_1241871	004860196	S	2424	CTGTGGCTTTTTGGTAAGGCTGCTTAGAAGCATGAGAAGCATGAGAATGG	12	-	55960270-55960319	12qC1	Mus musculus cofilin 2, muscle (Cfl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217503	ILMN_217503	CFL2	NM_007688.2	NM_007688.2		12632	126513132	NM_007688.2	Cfl2	NP_031714.1	ILMN_1249976	000020136	S	11	CAGCTCCCGGCGTGCCCTGCACTCTCTGCTGCCCGCCGCCGACCCCTCCT	12	-	55963804-55963853	12qC1	Mus musculus cofilin 2, muscle (Cfl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185151	ILMN_323552	LOC100044101	XM_001472383.1	XM_001472383.1		100044101	149268072	XM_001472383.1	LOC100044101	XP_001472433.1	ILMN_1231952	007510598	S	1122	GAGAAGATGTGGATGGAACATCGTGTGTCCTGCAGGGATGACTATACCCC	16	+	18467894-18467943		PREDICTED: Mus musculus similar to thioredoxin reductase 2 (LOC100044101), mRNA.					
Mus musculus	RefSeq	ILMN_198865	ILMN_314608	MBOAT4	XM_001472220.1	XM_001472220.1		234155	149258660	XM_001472220.1	Mboat4	XP_001472270.1	ILMN_1231327	004050180	S	1626	GGTGGAGGGCCGGAGCCTTTCCTCTCTCTGCCAACTGTGCTGTTCTTACA				8qA4	PREDICTED: Mus musculus membrane bound O-acyltransferase domain containing 4 (Mboat4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	The posttranslational octanoylation of peptidyl-serine to form peptidyl-O3-octanoyl-L-serine, typical of the protein ghrelin [goid 18191] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acyl group to an oxygen atom on the serine molecule [goid 16412] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221196	ILMN_247379	ANKRD39	NM_026241.3	NM_026241.3		109346	146134919	NM_026241.3	Ankrd39	NP_080517.1	ILMN_1253761	003060349	S	1491	GCTAGTCGGGCTGCACACCTGTCTTTGACTTTCCTATTTATGCCCATTCG				1qB	Mus musculus ankyrin repeat domain 39 (Ankrd39), mRNA.				9130416N05Rik; C030004B10Rik	9130416N05Rik; C030004B10Rik
Mus musculus	MEEBO	ILMN_192357	ILMN_192357	EIF3S6	scl9969.3.1_209				45476572	NM_008388	Eif3s6		ILMN_2487358	006770672	S	16	GCGAGGGTGTGTACACAGTTTGCTGTTTATCTTAAGGTGATCCTAGGCTC										
Mus musculus	Riken	ILMN_205168	ILMN_205168	A830055I09RIK	ri|A830055I09|PX00155F05|AK043943|2735					AK043943	A830055I09Rik		ILMN_1252200	000990037	S	2463	AGTCATGCCTCCTTCCCTAAGCTTTCTGTAGTACCTGATGGTTGACTGAC										
Mus musculus	RefSeq	ILMN_220707	ILMN_315415	4930529C04RIK	XR_033699.1	XR_033699.1		619677	149251582	XR_033699.1	4930529C04Rik		ILMN_2725583	004060315	S	1970	TCAGCAGGGGCAAGAAGCCCACCAACCTGGGCACCAGCTGTCTCCTGAGA				3qF1	PREDICTED: Mus musculus RIKEN cDNA 4930529C04 gene (4930529C04Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_212582	ILMN_212582	RRP1	NM_010925.2	NM_010925.2		18114	117676366	NM_010925.2	Rrp1	NP_035055.2	ILMN_2628045	005570338	S	1291	CCCTGAAAAAGCCTACAAGAAGATGCTGGAAGGGAGGCGGGAACGGAAGA	10	-	77868170-77868219	10qC1	Mus musculus ribosomal RNA processing 1 homolog (S. cerevisiae) (Rrp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit [goid 30688] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		AL033305; Nnp1; NNP-1; AL033306; AU018604	AL033305; Nnp1; NNP-1; AL033306; AU018604
Mus musculus	RefSeq	ILMN_200632	ILMN_200632	LOC384433	XM_357645.1	XM_357645.1			38084579	XM_357645.1	LOC384433		ILMN_2539449	002900148	S	104	TGGGATCAAGGCCACATGGACCGTTGCAGAGTAGGTTGCTACCACCGGCT										
Mus musculus	RefSeq	ILMN_189059	ILMN_231317	PRPF4B	NM_013830.1	NM_013830.1		19134	23956073	NM_013830.1	Prpf4b	NP_038858.1	ILMN_2719633	004760328	S	4471	GCCATTTTTAAAAGATTTTGTCTTCAGTGCTGGTAAGTCAGGTAAACTGT	13	+	34994754-34994803	13qA3.3	Mus musculus PRP4 pre-mRNA processing factor 4 homolog B (yeast) (Prpf4b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISS]	cbp143; Prpk; Prp4; Prp4k; 2610037H07; MGC5960	cbp143; Prpk; Prp4; Prp4k; 2610037H07; MGC5960
Mus musculus	RefSeq	ILMN_189059	ILMN_231317	PRPF4B	NM_013830.1	NM_013830.1		19134	23956073	NM_013830.1	Prpf4b	NP_038858.1	ILMN_1260179	001580181	S	4547	CTCCTGAAAGGATTACCTGCTAAAGATGTAACTCAGTATAGCCTTATTTC	13	+	34994830-34994879	13qA3.3	Mus musculus PRP4 pre-mRNA processing factor 4 homolog B (yeast) (Prpf4b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISS]	cbp143; Prpk; Prp4; Prp4k; 2610037H07; MGC5960	cbp143; Prpk; Prp4; Prp4k; 2610037H07; MGC5960
Mus musculus	RefSeq	ILMN_198506	ILMN_326177	LOC676461	XR_033411.1	XR_033411.1		676461	149256872	XR_033411.1	LOC676461		ILMN_1234795	001470041	S	1529	CTTCCAGTCAGATGGCCTTGATGAATGAGCACCCCCTCCTCTCATCCTAC					PREDICTED: Mus musculus hypothetical LOC676461 (LOC676461), misc RNA.					
Mus musculus	RefSeq	ILMN_217143	ILMN_217143	LAGE3	NM_025410.2	NM_025410.2		66192	142349821	NM_025410.2	Lage3	NP_079686.1	ILMN_2679532	000650059	S	364	CGAACCACATCGAGGACTGGTAGGGAAGGAGCTTAAAGTGAGCGGCTGCA	X	-	71600048-71600097	XqA7.3	Mus musculus L antigen family, member 3 (Lage3), mRNA.				Itba2; 1110049G11Rik; Eso3	Itba2; 1110049G11Rik; Eso3
Mus musculus	MEEBO	ILMN_191853	ILMN_191853	4930432J01RIK	scl0068269.1_31						4930432J01Rik		ILMN_2482775	002000500	S	18	GGCCTGGGCTTATCGCCAACACTTGAAGAGGCCAGAGCCAAAAACAAGAA										
Mus musculus	RefSeq	ILMN_234999	ILMN_234999	GTF2A1	NM_031391.1	NM_031391.1		83602	13878224	NM_031391.1	Gtf2a1	NP_113568.1	ILMN_3087593	005340414	A	932	CTGAAGATGGGCAGGTGGAAGAAGAGCCGCTCAACAGCGAGGATGACGTC	12	-	92801411-92801438:92805980-92806001	12qD3	Mus musculus general transcription factor II A, 1 (Gtf2a1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12) [goid 5672] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	TfIIAa/b; AA536742	TfIIAa/b; AA536742
Mus musculus	RefSeq	ILMN_212423	ILMN_212423	1700001C02RIK	NM_029285.1	NM_029285.1		75434	21729772	NM_029285.1	1700001C02Rik	NP_083561.1	ILMN_3003501	004480669	S	587	TCCTCTCAAGAGCGCCAAAGGCGGGACCTTTACTTCGAGTTCAGAGCCTG	5	+	30786335-30786384	5qB1	Mus musculus RIKEN cDNA 1700001C02 gene (1700001C02Rik), mRNA.				1700047H18Rik	1700047H18Rik
Mus musculus	RefSeq	ILMN_212138	ILMN_212138	SLC26A9	NM_177243.2	NM_177243.2		320718	31343152	NM_177243.2	Slc26a9	NP_796217.1	ILMN_1254047	004560450	S	1543	TGCCCTACGGTGTCGCAGTGGGTGTAGCCTTCTCCATCCTGGTTGTGATC	1	+	133589295-133589344	1qE4	Mus musculus solute carrier family 26, member 9 (Slc26a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IDA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IDA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion A(out) + anion B(in) = anion A(in) + anion B(out) [goid 15301] [evidence IDA]; Catalysis of the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3- [goid 15106] [evidence IDA]	E030002L01Rik	E030002L01Rik
Mus musculus	RefSeq	ILMN_212138	ILMN_212138	SLC26A9	NM_177243.2	NM_177243.2		320718	31343152	NM_177243.2	Slc26a9	NP_796217.1	ILMN_2833703	000630280	S	3579	GGATTGTTCCAGACTGGATCTCCCTCTACGTGGAACTCTTAACAATCTCC	1	+	133597890-133597939	1qE4	Mus musculus solute carrier family 26, member 9 (Slc26a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IDA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IDA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion A(out) + anion B(in) = anion A(in) + anion B(out) [goid 15301] [evidence IDA]; Catalysis of the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3- [goid 15106] [evidence IDA]	E030002L01Rik	E030002L01Rik
Mus musculus	RefSeq	ILMN_217460	ILMN_217460	MUG1	NM_008645.2	NM_008645.2		17836	31982170	NM_008645.2	Mug1	NP_032671.2	ILMN_1224954	005310523	S	2204	AATTTCTTGGAGTTTACGCACAACATTGAGTAAAAGACCTGAAGAGCCAC	6	+	121823670-121823719	6qF1	Mus musculus murinoglobulin 1 (Mug1), mRNA. XM_981606	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 17114] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217460	ILMN_217460	MUG1	NM_008645.2	NM_008645.2		17836	31982170	NM_008645.2	Mug1	NP_032671.2	ILMN_2683432	003520129	S	4486	CTGAATACAGCAGCCCCTGCAGCACAGACAAACAAAATGTTTGAAACTCC	6	+	121838596-121838622:121838931-121838947:121838948-121838953	6qF1	Mus musculus murinoglobulin 1 (Mug1), mRNA. XM_981606	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 17114] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_253611	ILMN_253611	CTSE	NM_007799.2	NM_007799.2		13034	31982440	NM_007799.2	Ctse	NP_031825.1	ILMN_2960325	002140639	S	1831	GATGGCAAGATAAATACCCACACACCTCTGCCTCAGGTCACAACCCATCC	1	+	133571795-133571844	1qE4	Mus musculus cathepsin E (Ctse), mRNA.	The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	A430072O03Rik; C920004C08Rik; CE; CatE	A430072O03Rik; C920004C08Rik; CE; CatE
Mus musculus	RefSeq	ILMN_209741	ILMN_209741	STARD3NL	NM_024270.2	NM_024270.2		76205	70794798	NM_024270.2	Stard3nl	NP_077232.2	ILMN_2598775	005490403	S	927	TGATACCTCATGGACATCGCTCCACCTCCACTCAAACCATCCCTGCCTGC	13	-	19449852-19449901	13qA2	Mus musculus STARD3 N-terminal like (Stard3nl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			AW124774; MENTHO; 6530409L22Rik; 0610035N01Rik	AW124774; MENTHO; 6530409L22Rik; 0610035N01Rik
Mus musculus	RefSeq	ILMN_217471	ILMN_312040	LOC100046320	XR_032844.1	XR_032844.1		100046320	149253451	XR_032844.1	LOC100046320		ILMN_1243283	004120669	S	1735	AGCAAGAACTTGGTCGTGTGATACATCTCAGCAATTTACCTCATTCTGGC					PREDICTED: Mus musculus similar to Matrin 3 (LOC100046320), misc RNA.					
Mus musculus	RefSeq	ILMN_209669	ILMN_256176	1700049K14RIK	NM_028525.2	NM_028525.2		73382	117676358	NM_028525.2	1700049K14Rik	NP_082801.2	ILMN_2598050	003370593	S	959	GCCGGGCTATCTTGTTCCTATATTTTGTAATGTTTCTTCTAACCTGATGA	14	+	64732524-64732570:64732571-64732573	14qD1	Mus musculus RIKEN cDNA 1700049K14 gene (1700049K14Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220270	ILMN_220270	LRDD	NM_022654.1	NM_022654.1		57913	12083586	NM_022654.1	Lrdd	NP_073145.1	ILMN_2992009	006940242	S	2661	CTTGGAACAGAGTGATCGGCGGGATGTGGCTGAAGAGGTGCGTGCCATCT	7	-	148624603-148624652	7qF5	Mus musculus leucine-rich and death domain containing (Lrdd), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1200011D09Rik; AU042446; Pidd	1200011D09Rik; AU042446; Pidd
Mus musculus	RefSeq	ILMN_188120	ILMN_260237	LRRTM2	NM_178005.3	NM_178005.3		107065	146198625	NM_178005.3	Lrrtm2	NP_821072.1	ILMN_2593391	002190040	S	3530	TAACACAGTATCCTGCATTCAAGACTTATTCTCTCCCCATGATTGGACTG				18qB1	Mus musculus leucine rich repeat transmembrane neuronal 2 (Lrrtm2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0416; AI851755; BB129880; C630011A14Rik	mKIAA0416; AI851755; BB129880; C630011A14Rik
Mus musculus	Riken	ILMN_205656	ILMN_205656	A630066E21RIK	ri|A630066E21|PX00147G15|AK042170|814					AK042170	A630066E21Rik		ILMN_1223953	002480259	S	514	CCTCTGCCTCAGATACCTCACTTGTGTTGTTCCTGTGCTCCAAGGGAAGC										
Mus musculus	RefSeq	ILMN_200513	ILMN_200513	LOC384331	XM_357578.1	XM_357578.1			38083048	XM_357578.1	LOC384331		ILMN_1242100	000630671	S	958	GGAAGATGTAAAACCAGAGATAGACAATGCAAATACATCTGGGGGCAAAG										
Mus musculus	RefSeq	ILMN_214789	ILMN_318054	2010300C02RIK	XM_001476698.1	XM_001476698.1		72097	149233727	XM_001476698.1	2010300C02Rik	XP_001476748.1	ILMN_1245276	003370465	S	3826	GCAGGGATTCCCTTTACAAGAGCAGCTACCCACTTAACAATCCAGTTTCC				1qB	PREDICTED: Mus musculus RIKEN cDNA 2010300C02 gene (2010300C02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221483	ILMN_326768	LOC100048056	XR_034510.1	XR_034510.1		100048056	149261470	XR_034510.1	LOC100048056		ILMN_2736221	002000112	S	1341	GGCTTATGTTAAGAAGTTTTCCTACCAAAGTGTAACGACTGATGACTGGA					PREDICTED: Mus musculus similar to Lta4h protein (LOC100048056), misc RNA.					
Mus musculus	RefSeq	ILMN_221483	ILMN_326768	LOC100048056	XR_034510.1	XR_034510.1		100048056	149261470	XR_034510.1	LOC100048056		ILMN_2739486	007160709	S	1659	GGGGCACATAAAGCGAATGCAAGAGGTGTACAACTTCAATGCCATTAACA					PREDICTED: Mus musculus similar to Lta4h protein (LOC100048056), misc RNA.					
Mus musculus	RefSeq	ILMN_217340	ILMN_217340	KIF27	NM_175214.3	NM_175214.3		75050	32401468	NM_175214.3	Kif27	NP_780423.2	ILMN_2742145	003310044	S	4133	CTGGGGGCCGGTCAATGACTGCTGATTCCCTTGAAGACCCCGAAGAAAAC	13	-	58389156-58389205	13qB1	Mus musculus kinesin family member 27 (Kif27), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	4930517I18Rik	4930517I18Rik
Mus musculus	RefSeq	ILMN_217340	ILMN_217340	KIF27	NM_175214.3	NM_175214.3		75050	32401468	NM_175214.3	Kif27	NP_780423.2	ILMN_1229095	007000176	S	4302	CAGGAAAGGGGGTTGGCACCACTCCTATGTATGACAGTGTATGTGGGGGC	13	-	58388987-58389036	13qB1	Mus musculus kinesin family member 27 (Kif27), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	4930517I18Rik	4930517I18Rik
Mus musculus	MEEBO	ILMN_215266	ILMN_215266	RPS18	scl0001649.1_199	NM_138946.1			20336729	NM_138946.1	Rps18		ILMN_2747410	005270221	S	959	TATAATTTAAGTTAGTGCTTAAGTCAGAAGGCAAGGTGGGCGTGGGGCCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215266	ILMN_215266	RPS18	scl0001649.1_199	NM_138946.1			20336729	NM_138946.1	Rps18		ILMN_2657409	002810437	S	212	CTGTGCCCCGTGTGACCTGCTGGGAGATGATTACAGCTGACTTCGAATGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	RefSeq	ILMN_254020	ILMN_254020	HDAC6	NM_010413.2	NM_010413.2		15185	6996925	NM_010413.2	Hdac6	NP_034543.2	ILMN_2943818	003460703	S	3369	GTCAACCTGGTGTTATGTCTGTCAGGCTTATGTCCACCAGGACGATCTCC	X	-	7507656-7507663:7507910-7507951	XqA1.1	Mus musculus histone deacetylase 6 (Hdac6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IDA]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Sfc6; mHDA2; Hdac5	Sfc6; mHDA2; Hdac5
Mus musculus	RefSeq	ILMN_210764	ILMN_210764	PER2	NM_011066.1	NM_011066.1		18627	6755027	NM_011066.1	Per2	NP_035196.1	ILMN_2987863	005900497	S	5533	GCCAAGCATCCAGCCCTGTTTTCTTTAGAATGTGTGCTTACACGGGTGTC	1	-	93246610-93246659	1qD	Mus musculus period homolog 2 (Drosophila) (Per2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0347; mPer2	mKIAA0347; mPer2
Mus musculus	RefSeq	ILMN_210764	ILMN_210764	PER2	NM_011066.1	NM_011066.1		18627	6755027	NM_011066.1	Per2	NP_035196.1	ILMN_2987862	005670424	S	5631	GCTCTCAGAGTTTGTGCGATGATGATTCGTGAGCCTTGCCGGACAAGAGG	1	-	93246512-93246561	1qD	Mus musculus period homolog 2 (Drosophila) (Per2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0347; mPer2	mKIAA0347; mPer2
Mus musculus	RefSeq	ILMN_201404	ILMN_201404	LOC385108	XM_358057.1	XM_358057.1			38093544	XM_358057.1	LOC385108		ILMN_1234786	003940328	S	286	CGTTTTCGCAGCTACCAAGACAGCAATGCAGTAGCAAGCCAGTGGCTGAC										
Mus musculus	Riken	ILMN_206142	ILMN_206142	A530064L23RIK	ri|A530064L23|PX00142F01|AK080118|3462					AK080118	A530064L23Rik		ILMN_1252992	003450411	S	3320	GCAGAGGACCTAAGCTTTTATCCCAGAGCTCATGTTGGGCAGCTTACAAC										
Mus musculus	RefSeq	ILMN_218541	ILMN_218541	4931440F15RIK	NM_176829.2	NM_176829.2		216622	142377548	NM_176829.2	4931440F15Rik	NP_789799.1	ILMN_2697082	004890148	S	2927	CCCAGTATCCCAATAACTTCTGGGGATGGGCTTCTAACCAAGATAGGGGG	11	-	29722692-29722741	11qA3.3	Mus musculus RIKEN cDNA 4931440F15 gene (4931440F15Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		RP23-76P22.2	RP23-76P22.2
Mus musculus	RefSeq	ILMN_184980	ILMN_218541	4931440F15RIK	NM_176829.2	NM_176829.2		216622	142377548	NM_176829.2	4931440F15Rik	NP_789799.1	ILMN_1229697	007050195	S	97	TCTGCCCCAGTGTGTGGTTTTAGGATATAAATGAGAATATAAACTGGACC	11	-	29725522-29725571	11qA3.3	Mus musculus RIKEN cDNA 4931440F15 gene (4931440F15Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		RP23-76P22.2	RP23-76P22.2
Mus musculus	RefSeq	ILMN_218541	ILMN_218541	4931440F15RIK	NM_176829.2	NM_176829.2		216622	142377548	NM_176829.2	4931440F15Rik	NP_789799.1	ILMN_1232094	006960386	S	84	CACACTGGGGCAGACAGACAATCAAGATTTAACAGAAGCAGGAGAACCGC	11	-	29725535-29725584	11qA3.3	Mus musculus RIKEN cDNA 4931440F15 gene (4931440F15Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		RP23-76P22.2	RP23-76P22.2
Mus musculus	RefSeq	ILMN_219195	ILMN_219195	HMGCL	NM_008254.1	NM_008254.1		15356	6680232	NM_008254.1	Hmgcl	NP_032280.1	ILMN_1256234	006660601	S	831	GTCCCTATGCAAAAGGGGCATCAGGGAACTTGGCTACTGAGGACCTGGTC	4	+	135516742-135516791	4qD3	Mus musculus 3-hydroxy-3-methylglutaryl-Coenzyme A lyase (Hmgcl), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetyl-CoA + acetoacetate [goid 4419] [evidence IEA]	HL; AW476067	HL; AW476067
Mus musculus	RefSeq	ILMN_219195	ILMN_219195	HMGCL	NM_008254.1	NM_008254.1		15356	6680232	NM_008254.1	Hmgcl	NP_032280.1	ILMN_2822131	007050612	S	1335	GGTGGGGGTTGATCTGCGTCTGTGGTCATCTGCCAACGAAATCTCCACTC	4	+	135518446-135518495	4qD3	Mus musculus 3-hydroxy-3-methylglutaryl-Coenzyme A lyase (Hmgcl), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetyl-CoA + acetoacetate [goid 4419] [evidence IEA]	HL; AW476067	HL; AW476067
Mus musculus	RefSeq	ILMN_219195	ILMN_219195	HMGCL	NM_008254.1	NM_008254.1		15356	6680232	NM_008254.1	Hmgcl	NP_032280.1	ILMN_2822134	006580192	S	1097	GAGGAGATGGAATGAGAGCAAATGAGCCGGCATCACAGAGGTCCCTGTCC	4	+	135518208-135518257	4qD3	Mus musculus 3-hydroxy-3-methylglutaryl-Coenzyme A lyase (Hmgcl), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetyl-CoA + acetoacetate [goid 4419] [evidence IEA]	HL; AW476067	HL; AW476067
Mus musculus	RefSeq	ILMN_217021	ILMN_217021	MMP2	NM_008610.2	NM_008610.2		17390	47271505	NM_008610.2	Mmp2	NP_032636.1	ILMN_2678218	003870072	S	2815	TCCTGCCCAAAGGACTCGGGTTGTCTGACATCGCTGCATGATGCATCTCA	8	+	95377093-95377142	8qC5	Mus musculus matrix metallopeptidase 2 (Mmp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state [goid 1955] [evidence IGI]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]	Clg4a; GelA; MMP-2	Clg4a; GelA; MMP-2
Mus musculus	RefSeq	ILMN_213727	ILMN_260115	BOLA1	NM_026975.2	NM_026975.2		69168	142387316	NM_026975.2	Bola1	NP_081251.1	ILMN_2640140	003360274	S	342	TACATGCCCTGGCCATCCAGGCGAAGACCCCCGCCCAGTGGAGAGAAAAC	3	-	96000848-96000897	3qF2.1	Mus musculus bolA-like 1 (E. coli) (Bola1), mRNA.				1810037G04Rik	1810037G04Rik
Mus musculus	MEEBO	ILMN_188356	ILMN_188356	D730046L02RIK	scl20498.5_293				30794249	NM_172979	D730046L02Rik		ILMN_2451987	007610563	S	20	CATATCAATATTCCGATCTTTTATTTCTTGCAAAATGTGCCATGGGTCCA										
Mus musculus	RefSeq	ILMN_237872	ILMN_237872	SPATA20	NM_144827.3	NM_144827.3		217116	46559394	NM_144827.3	Spata20	NP_659076.2	ILMN_2878078	000510228	S	2360	CGGATCCCTGTGAGTTACGAAAGCTGCTACACCAATGACTGCCCAGAACC	11	-	94340397-94340409:94340410-94340446	11qD	Mus musculus spermatogenesis associated 20 (Spata20), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Tisp78	Tisp78
Mus musculus	RefSeq	ILMN_212656	ILMN_237872	SPATA20	NM_144827.3	NM_144827.3		217116	46559394	NM_144827.3	Spata20	NP_659076.2	ILMN_2628925	007160598	S	2168	AGGCCAAGGACACCAAGGCCCTGCTGCAATGTGTCCACTCCATCTACGTC	11	-	94340761-94340810	11qD	Mus musculus spermatogenesis associated 20 (Spata20), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Tisp78	Tisp78
Mus musculus	RefSeq	ILMN_204952	ILMN_225437	ZFP820	NM_029281.2	NM_029281.2		75424	145386574	NM_029281.2	Zfp820	NP_083557.2	ILMN_1242159	001440709	S	3074	GGCATGGACTTTGTCCAAGTCATATTGTTTGCAACACTTGAAGCTCCACA				17qA3.3	Mus musculus zinc finger protein 820 (Zfp820), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC29393	MGC29393
Mus musculus	RefSeq	ILMN_215285	ILMN_225437	ZFP820	NM_029281.2	NM_029281.2		75424	145386574	NM_029281.2	Zfp820	NP_083557.2	ILMN_2657619	000670162	S	613	TCTAAAAGCCCTGTTAACTGTTTAAATTTGTTCTCTACCATTAGTTTAAC				17qA3.3	Mus musculus zinc finger protein 820 (Zfp820), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC29393	MGC29393
Mus musculus	RefSeq	ILMN_201253	ILMN_201253	LOC382118	XM_356204.1	XM_356204.1			38090171	XM_356204.1	LOC382118		ILMN_2541641	005670411	S	457	GTGAAGCAGGAACCAGGAAGCCAGACATGGGGACAGAAGAACTACCTTCC										
Mus musculus	RefSeq	ILMN_198868	ILMN_309962	LOC619780	XR_035697.1	XR_035697.1		619780	149258587	XR_035697.1	LOC619780		ILMN_2533206	000540441	S	329	GGGAGCACGATAACAGGAAAACTGAAGGATGGGAAGTTGATTGTGGAGCG	8	-	35370387-35370436	8qA4	PREDICTED: Mus musculus similar to Fatty acid binding protein 5, epidermal (LOC619780), misc RNA.					
Mus musculus	Riken	ILMN_207217	ILMN_207217	FISH	ri|D530025L04|PX00673A16|AK085227|2130					AK085227	Fish		ILMN_1239318	005340189	S	412	CTTGCTATATGGCCTGTCCTTGGGGCCCGGCAAGCTGCGAGCCCTGGCTA										
Mus musculus	RefSeq	ILMN_214320	ILMN_214320	GCDH	NM_008097.2	NM_008097.2		270076	113680424	NM_008097.2	Gcdh	NP_032123.2	ILMN_1228907	003890524	S	1639	GGACACAACTTTTATGGTGGAAAGTGAGACACTGATTTGAGATTCAGGAC	8	-	87410774-87410823	8qC3	Mus musculus glutaryl-Coenzyme A dehydrogenase (Gcdh), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: glutaryl-CoA + acceptor = crotonoyl-CoA + CO2 + reduced acceptor [goid 4361] [evidence IEA]	AI266902; D17825; 9030411L18	AI266902; D17825; 9030411L18
Mus musculus	RefSeq	ILMN_214320	ILMN_214320	GCDH	NM_008097.2	NM_008097.2		270076	113680424	NM_008097.2	Gcdh	NP_032123.2	ILMN_1222337	000450411	S	1621	GCTCAAGAAGAAATGTATGGACACAACTTTTATGGTGGAAAGTGAGACAC	8	-	87410792-87410841	8qC3	Mus musculus glutaryl-Coenzyme A dehydrogenase (Gcdh), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: glutaryl-CoA + acceptor = crotonoyl-CoA + CO2 + reduced acceptor [goid 4361] [evidence IEA]	AI266902; D17825; 9030411L18	AI266902; D17825; 9030411L18
Mus musculus	RefSeq	ILMN_215925	ILMN_215925	A930025D01RIK	NM_178762.2	NM_178762.2		319513	31343419	NM_178762.2	A930025D01Rik	NP_848877.1	ILMN_2899022	002600253	S	3563	CTTTGGGGGAGACAAGAGACTTGCAGAGGCACTGGTACAGTACCTAAGAC	2	-	130109718-130109767	2qF1	Mus musculus RIKEN cDNA A930025D01 gene (A930025D01Rik), mRNA.				AI480484	AI480484
Mus musculus	RefSeq	ILMN_196395	ILMN_196395	9130416J18RIK	XM_147931.1	XM_147931.1			20902986	XM_147931.1	9130416J18Rik		ILMN_2523948	004290438	S	1921	CCCAGCACTTGGGAGGTGAAAGCAAGAAGAACAAGAGTTCAAGGGCAGCC										
Mus musculus	RefSeq	ILMN_215714	ILMN_215714	PDIA4	NM_009787.2	NM_009787.2		12304	86198315	NM_009787.2	Pdia4	NP_033917.2	ILMN_1249670	004040274	S	1890	ATACCAGCCTAGGCAAGAAATACAAGGGCCAGAAGGACCTGGTCATCGCC	6	-	47746681-47746730	6qB2.3	Mus musculus protein disulfide isomerase associated 4 (Pdia4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	Erp72; AI987846; Cai	Erp72; AI987846; Cai
Mus musculus	Riken	ILMN_203708	ILMN_203708	GRID2	ri|9630045A19|PX00116B10|AK036192|4275					AK036192	Grid2		ILMN_2559374	000150014	S	3951	GTTACATGGGACCCTTGAGACAGGCAGTAACTGGTATAGTCAGGCAGTTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192552	ILMN_324019	LOC100044557	XM_001472571.1	XM_001472571.1		100044557	149275181	XM_001472571.1	LOC100044557	XP_001472621.1	ILMN_2609984	004180630	S	1908	AGCAAAGAACCCTGCCATAGTTTTGACTCAGCCCCATGCATCCTTTCCCT					PREDICTED: Mus musculus similar to cyclin N-terminal domain containing 1 (LOC100044557), mRNA.					
Mus musculus	RefSeq	ILMN_185977	ILMN_314192	V1RH1	XM_001471795.1	XM_001471795.1		171245	149263868	XM_001471795.1	V1rh1	XP_001471845.1	ILMN_2431594	005220019	S	573	TTCTATCATAAGTACAGGTATGAATATATCACAGCATAAGAATAGTGACA	13	+	22533713-22533762	13qA3.1	PREDICTED: Mus musculus vomeronasal 1 receptor, H1 (V1rh1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_213898	ILMN_213898	SF3A2	NM_013651.3	NM_013651.3		20222	22296887	NM_013651.3	Sf3a2	NP_038679.2	ILMN_1223689	002190750	S	1276	GTGTCCACCCACCAGCTCCAGGGGTACACCCCCCAACTCCAGGGGTGCAC	10	+	80267148-80267197	10qC1	Mus musculus splicing factor 3a, subunit 2 (Sf3a2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [evidence TAS]	SFA66; 66kDa; PRP11; Sap62	SFA66; 66kDa; PRP11; Sap62
Mus musculus	RefSeq	ILMN_189681	ILMN_189681	TRAPPC3	NM_013718.2	NM_013718.2		27096	31560502	NM_013718.2	Trappc3	NP_038746.1	ILMN_2463447	004150044	S	162	GAGCGCTTGTCACCCAGCTGTGCAAGGACTATGAAAACGACGAAGACGTG	4	+	125949950-125949999	4qD2.2	Mus musculus trafficking protein particle complex 3 (Trappc3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bet3; 1110058K12Rik; AI835942; AU019197	Bet3; 1110058K12Rik; AI835942; AU019197
Mus musculus	RefSeq	ILMN_189681	ILMN_189681	TRAPPC3	NM_013718.2	NM_013718.2		27096	31560502	NM_013718.2	Trappc3	NP_038746.1	ILMN_1238661	003360255	S	2	GACCTATGGAGCGCTTGTCACCCAGCTGTGCAAGGACTATGAAAACGACG	4	+	125939650-125939699	4qD2.2	Mus musculus trafficking protein particle complex 3 (Trappc3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bet3; 1110058K12Rik; AI835942; AU019197	Bet3; 1110058K12Rik; AI835942; AU019197
Mus musculus	RefSeq	ILMN_189681	ILMN_189681	TRAPPC3	NM_013718.2	NM_013718.2		27096	31560502	NM_013718.2	Trappc3	NP_038746.1	ILMN_2909634	004670224	S	952	GGGACGAGCCTGATGCATCTGTTCCTGCGACTTCATGACGCCATTGGCAA	4	+	125952823-125952872	4qD2.2	Mus musculus trafficking protein particle complex 3 (Trappc3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bet3; 1110058K12Rik; AI835942; AU019197	Bet3; 1110058K12Rik; AI835942; AU019197
Mus musculus	RefSeq	ILMN_189681	ILMN_189681	TRAPPC3	NM_013718.2	NM_013718.2		27096	31560502	NM_013718.2	Trappc3	NP_038746.1	ILMN_2503748	000050097	S	375	ACTGGAGCCCAGCCGGAGATGAATTCTCCCTCATCCTGGAAAACAACCCT	4	+	125951177-125951226	4qD2.2	Mus musculus trafficking protein particle complex 3 (Trappc3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bet3; 1110058K12Rik; AI835942; AU019197	Bet3; 1110058K12Rik; AI835942; AU019197
Mus musculus	MEEBO	ILMN_189837	ILMN_189837	1700120J03RIK	scl074313.4_216						1700120J03Rik		ILMN_1231746	006060475	S	14	GGGCAAATTTGGCACTCTCAAGAATCCACAATGAACTGAGAAAGCTGCCG										
Mus musculus	RefSeq	ILMN_194132	ILMN_194132	V1RJ2	NM_134226.1	NM_134226.1		171260	21717760	NM_134226.1	V1rj2	NP_598987.1	ILMN_2503699	000630142	S	888	GCAATTCACTTCTTCATTTTCGGTACTGAGGATGACATGTCATCAAAGTT	7	+	13805575-13805624	7qA1	Mus musculus vomeronasal 1 receptor, J2 (V1rj2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	V1RE8	V1RE8
Mus musculus	RefSeq	ILMN_211933	ILMN_211933	DLGAP2	NM_172910.2	NM_172910.2		244310	142359060	NM_172910.2	Dlgap2	NP_766498.1	ILMN_2620893	000630500	S	4391	CCCAGGGTACCTTTAAAGGGGTTTGCTTGTTTCAGAAGCCAGTTGTGATG	8	+	14847568-14847617	8qA1.1	Mus musculus discs, large (Drosophila) homolog-associated protein 2 (Dlgap2), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]		DAP2; Sapap2; 6430596N04Rik	DAP2; Sapap2; 6430596N04Rik
Mus musculus	Riken	ILMN_204874	ILMN_204874	A130089L14RIK	ri|A130089L14|PX00126E02|AK038246|2085					AK038246	A130089L14Rik		ILMN_1218834	006650228	S	1842	GTGCTGGAGTGACTGCTTTCCAGTAGACCAGATGGGTAGGAGAGGGAAGC										
Mus musculus	RefSeq	ILMN_222173	ILMN_222173	OLFR1198	NM_207567.1	NM_207567.1		404330	46430593	NM_207567.1	Olfr1198	NP_997450.1	ILMN_2745761	006060243	S	593	CCACTACAGGAGTTCTGTCCATTTTGACCTTTCTTGCCTTGGTCATTTCT	2	-	88586401-88586450	2qE1	Mus musculus olfactory receptor 1198 (Olfr1198), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR225-13	MOR225-13
Mus musculus	RefSeq	ILMN_245638	ILMN_245638	LCE3A	NM_001039594.1	NM_001039594.1		545548	88853566	NM_001039594.1	Lce3a	NP_001034683.1	ILMN_2781577	001340521	S	320	CAGCTCTGGGGGCTGCTGCTAACTTGCATCCTGAGTTTGAGACAAAAGGG	3	-	92729388-92729416:92729417-92729437	3qF1	Mus musculus late cornified envelope 3A (Lce3a), mRNA.				EG545548; MGC118457	EG545548; MGC118457
Mus musculus	RefSeq	ILMN_198356	ILMN_320230	LOC213320	XR_032186.1	XR_032186.1		213320	149255130	XR_032186.1	LOC213320		ILMN_1220937	004210037	S	2059	CAGGATCCAGATAAGGACAGGAATGGGAGTGCACTTGCTGGTTACAAATG	6	+	50560664-50560713	6qB2.3	PREDICTED: Mus musculus similar to crooked neck-like 1 protein (LOC213320), misc RNA.					
Mus musculus	MEEBO	ILMN_209978	ILMN_209978	TACC2	scl000285.1_4	NM_206856.1			45827758	NM_206856.1	Tacc2		ILMN_1225058	005960324	S	274	CTGCCCGTGCAAGTCCTGCTCCTTTGGCCCCAGAACATACAGCCTCGGCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles [goid 30953] [evidence IDA]; The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle [goid 22027] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton [goid 32886] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence ISO]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]		
Mus musculus	MEEBO	ILMN_209978	ILMN_209978	TACC2	scl000285.1_4	NM_206856.1			45827758	NM_206856.1	Tacc2		ILMN_2601026	004210537	S	2641	AGTTTGCTGTCATGCGGATAGAAGCCCTGAAGCTGGCCAGGCAGATCGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles [goid 30953] [evidence IDA]; The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle [goid 22027] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton [goid 32886] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence ISO]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]		
Mus musculus	MEEBO	ILMN_217720	ILMN_217720	B630019A10RIK	scl00320099.1_311	NM_177072.2			31342736	NM_177072.2	B630019A10Rik		ILMN_2686764	006110255	S	2564	AAGTCTCTTGAGAGTAGGTCAGTAGCCACGGATGGGAAGGAACCAGCCCA										
Mus musculus	MEEBO	ILMN_188209	ILMN_188209	1700127G21RIK	scl078644.3_2						1700127G21Rik		ILMN_2450718	004640537	S	5	GCTCTGGGGGAGAAGCATGGAGTTAGACATGCAGAAGACACAATAATAAG										
Mus musculus	Riken	ILMN_203024	ILMN_203024	6030416D17RIK	ri|6030416D17|PX00056O16|AK031375|2530					AK031375	6030416D17Rik		ILMN_1259386	007610241	S	2257	GGCAGCAGGGGGTCACACATAAACCTGGACATCCGAGAGCTTGGTACAGG										
Mus musculus	RefSeq	ILMN_225306	ILMN_225306	CRIM1	NM_015800.2	NM_015800.2		50766	118131067	NM_015800.2	Crim1	NP_056615.1	ILMN_2910295	003190750	S	3429	AGCAGCGCCGATGAGGTCCCGAAAGACGGAGAAAGACGAAAATCTGCTCT	17	+	78773581-78773630	17qE2-qE3	Mus musculus cysteine rich transmembrane BMP regulator 1 (chordin like) (Crim1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	AU015004	AU015004
Mus musculus	RefSeq	ILMN_219691	ILMN_219691	2210023G05RIK	NM_197999.1	NM_197999.1		72361	37574079	NM_197999.1	2210023G05Rik	NP_932116.1	ILMN_1247906	007100630	S	2122	CCTATCACAGGGGTGGGCTGTGTCAGAACCACATGCTCCCTCTCATCAGC	8	+	107492722-107492771	8qD3	Mus musculus RIKEN cDNA 2210023G05 gene (2210023G05Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219691	ILMN_219691	2210023G05RIK	NM_197999.1	NM_197999.1		72361	37574079	NM_197999.1	2210023G05Rik	NP_932116.1	ILMN_2895284	007100458	S	2557	ATAGGTGGCTGAAGCCATGATTCCCTCCATGTTTACTCTCCGGTTGGTGG	8	+	107493157-107493206	8qD3	Mus musculus RIKEN cDNA 2210023G05 gene (2210023G05Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216621	ILMN_237705	OLFR920	NM_146787.1	NM_146787.1		258783	22129274	NM_146787.1	Olfr920	NP_666998.1	ILMN_1232797	000610082	S	594	GGTGTTAATTGTAGCAGGGAAGGATATCATTGTGCCCACTGTGATCATCT	9	+	38563868-38563917	9qA5.1	Mus musculus olfactory receptor 920 (Olfr920), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR165-6	MOR165-6
Mus musculus	RefSeq	ILMN_215623	ILMN_215623	CCL25	NM_009138.1	NM_009138.1		20300	6677880	NM_009138.1	Ccl25	NP_033164.1	ILMN_2942353	006900546	S	916	ACGGGAGAGAGAGGAACGAGAGGATAGTGAGTGTGTGAGAGTGCCTACAC	8	+	4359905-4359954	8qA1.1	Mus musculus chemokine (C-C motif) ligand 25 (Ccl25), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IDA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TECK; Scya25; AI852536; CKb15	TECK; Scya25; AI852536; CKb15
Mus musculus	RefSeq	ILMN_219726	ILMN_219726	MRPS6	NM_080456.1	NM_080456.1		121022	23956243	NM_080456.1	Mrps6	NP_536704.1	ILMN_1246725	003890102	S	548	AGGATACTTTAGCCCATGACCATTTTGCTGCAGGAGGTAGAAACTGCTGG	16	+	92112240-92112289	16qC4	Mus musculus mitochondrial ribosomal protein S6 (Mrps6), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	AW046321	AW046321
Mus musculus	RefSeq	ILMN_194484	ILMN_234738	LRRC29	NM_177449.2	NM_177449.2		234684	31343342	NM_177449.2	Lrrc29	NP_803232.1	ILMN_2732696	004230431	S	1428	GTTCGTTCATCATTGGTTACTTAAAGATCCCTTGCCCCCCAGCGATGTCA	8	-	108211047-108211096	8qD3	Mus musculus leucine rich repeat containing 29 (Lrrc29), mRNA.				A630024J02Rik; FBL9; FBXL9	A630024J02Rik; FBL9; FBXL9
Mus musculus	Riken	ILMN_201635	ILMN_201635	DGUOK	ri|1110012K08|R000016I17|AK003639|760					AK003639	Dguok		ILMN_1230963	002070471	S	479	GCAGTCACATACACTAAGGGGAGTACTGAGACGGCAGCATACAGTAGGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The chemical reactions and pathways involving dGTP, guanosine triphosphate [goid 46070] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + deoxyguanosine = ADP + dGMP [goid 4138] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + deoxyguanosine = ADP + dGMP [goid 4138] [evidence IDA]		
Mus musculus	RefSeq	ILMN_250332	ILMN_250332	BC051019	NM_001040700.2	NM_001040700.2		57355	110625625	NM_001040700.2	BC051019	NP_001035790.1	ILMN_2875039	002680441	S	1640	TTGACAACGGAACTGGAGGAGGCTGAGCGGTGGCGGACAAGAGTGCCTAA	7	-	116859810-116859859	7qE3	Mus musculus cDNA sequence BC051019 (BC051019), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA571491; D7H11orf16; ICRFP703B1614Q5.5	AA571491; D7H11orf16; ICRFP703B1614Q5.5
Mus musculus	RefSeq	ILMN_219526	ILMN_219526	TMEM108	NM_178638.2	NM_178638.2		81907	31340901	NM_178638.2	Tmem108	NP_848753.1	ILMN_2804559	002230070	S	1836	CCAATGGCGACTATCGAGACACTGGGATGGTCCTCGTGAACCCCTTCTGC	9	-	103342855-103342904	9qF1	Mus musculus transmembrane protein 108 (Tmem108), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI462967; R74726; B130017P16Rik	AI462967; R74726; B130017P16Rik
Mus musculus	Riken	ILMN_202547	ILMN_202547	2810453H10RIK	ri|2810453H10|ZX00083I22|AK013337|1766					AK013337	2810453H10Rik		ILMN_2550439	006450601	S	771	GCGAGGGAGGGCTGTTTGGGCGGCAGAAGATTAAGTCAAATAAGAGTAGC										
Mus musculus	RefSeq	ILMN_214667	ILMN_235009	OLFR643	NM_147077.1	NM_147077.1		259081	22128812	NM_147077.1	Olfr643	NP_667288.1	ILMN_2650565	006280333	S	811	CCAAGGTATGTGCACACCCTGCTCTCACTTGTTTATCTGTTTGTGCCTCC	7	-	111207254-111207303	7qE3	Mus musculus olfactory receptor 643 (Olfr643), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123671; MOR13-2	MGC123671; MOR13-2
Mus musculus	RefSeq	ILMN_215550	ILMN_215550	SIRT7	NM_153056.1	NM_153056.1		209011	23346442	NM_153056.1	Sirt7	NP_694696.1	ILMN_1253970	003400632	S	1609	GGGTATGCGGCACAGGGAGAATCTAACTAAGCCTCCAGTCTGAGCAAGTC	11	-	120479707-120479756	11qE2	Mus musculus sirtuin 7 (silent mating type information regulation 2, homolog) 7 (S. cerevisiae) (Sirt7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC37560; MGC31235	MGC37560; MGC31235
Mus musculus	RefSeq	ILMN_209001	ILMN_233947	A430107O13RIK	NM_001081351.1	NM_001081351.1		214642	124486850	NM_001081351.1	A430107O13Rik	NP_001074820.1	ILMN_2591599	005360279	S	3684	TAGACACATTCACTATCACAATGGGACGGCACAAAGAATTTCTGCAGGGC	6	+	22187669-22187718	6qA3.1	Mus musculus RIKEN cDNA A430107O13 gene (A430107O13Rik), mRNA.				6720481P07	6720481P07
Mus musculus	RefSeq	ILMN_227382	ILMN_227382	MED1	NM_001080118.1	NM_001080118.1		19014	121582397	NM_001080118.1	Med1	NP_001073587.1	ILMN_3106388	004810477	A	1728	GACGATGAGGGCTATTCGGAGGAAGGCTGAAACCATACAGGCTGACACCC	11	-	98028217-98028223:98028833-98028875	11qD	Mus musculus mediator complex subunit 1 (Med1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The formation of either of the compounds secreted by the thyroid gland, mainly thyroxine and triiodothyronine. This is achieved by the iodination and joining of tyrosine molecules to form the precursor thyroglobin, proteolysis of this precursor gives rise to the thyroid hormones [goid 6590] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IC ]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IPI]	MGC90617; MED1; CRSP210; TRAP220; PBP; Pparbp; DRIP205; AI480703	MGC90617; MED1; CRSP210; TRAP220; PBP; Pparbp; DRIP205; AI480703
Mus musculus	RefSeq	ILMN_196776	ILMN_196776	H2-M10.3	NM_201608.2	NM_201608.2		110696	118130960	NM_201608.2	H2-M10.3	NP_963902.1	ILMN_2862866	003140347	S	1092	CCTGAGCTGGGGCCACTTGCTAGAATGGAATTATGGTTGGTATGGATGCC	17	-	36569838-36569887	17qB1	Mus musculus histocompatibility 2, M region locus 10.3 (H2-M10.3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			5.3H	5.3H
Mus musculus	RefSeq	ILMN_198161	ILMN_196776	H2-M10.3	NM_201608.2	NM_201608.2		110696	118130960	NM_201608.2	H2-M10.3	NP_963902.1	ILMN_1247647	001240241	S	1218	CTTAGGTGACTTCAAAAGCTCCTGACTTTTCTTTCAATGGCTGACACCTG	17	-	36569712-36569761	17qB1	Mus musculus histocompatibility 2, M region locus 10.3 (H2-M10.3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			5.3H	5.3H
Mus musculus	RefSeq	ILMN_200511	ILMN_196776	H2-M10.3	NM_201608.2	NM_201608.2		110696	118130960	NM_201608.2	H2-M10.3	NP_963902.1	ILMN_1260360	006380152	S	1022	AGGCATGGACAGTGCCCAGAGATCTGATGCATCTCTCCTAGTAAGGTAGG	17	-	36569908-36569957	17qB1	Mus musculus histocompatibility 2, M region locus 10.3 (H2-M10.3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			5.3H	5.3H
Mus musculus	MEEBO	ILMN_188144	ILMN_188144	IGLC2_J00595_IG_LAMBDA_CONSTANT_2_14	IGLC2_J00595_Ig_lambda_constant_2_14						IGLC2_J00595_Ig_lambda_constant_2_14		ILMN_2450155	000130162	S	5	TCGCACAGGTCAGCCCAAGTCCACTCCCACTCTCACCGTGTTTCCACCTT										
Mus musculus	RefSeq	ILMN_213740	ILMN_213740	MIB1	NM_144860.2	NM_144860.2		225164	32189427	NM_144860.2	Mib1	NP_659109.2	ILMN_2933834	005550270	S	3624	TGCCAGCTCTGTGGAGACCGGATGAGTGAATGCCCAATTTGTCGCAAGGC	18	+	10812046-10812095	18qA1	Mus musculus mindbomb homolog 1 (Drosophila) (Mib1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of endocytosis [goid 45807] [evidence IDA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC18948; mKIAA1323; Mib; DIP-1; E430019M12Rik	MGC18948; mKIAA1323; Mib; DIP-1; E430019M12Rik
Mus musculus	RefSeq	ILMN_191581	ILMN_191581	TNP1	NM_009407.1	NM_009407.1		21958	6678394	NM_009407.1	Tnp1	NP_033433.1	ILMN_1236328	004230762	S	307	GCCAGTCGTGACGAAATTCGGAATGTATATGTTGGCTGTTTCTCCCCAAC	1	-	73061691-73061740	1qC3	Mus musculus transition protein 1 (Tnp1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence TAS]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Tp-1; TP1; Stp-1	Tp-1; TP1; Stp-1
Mus musculus	RefSeq	ILMN_223828	ILMN_325481	LOC100044439	XM_001472253.1	XM_001472253.1		100044439	149259138	XM_001472253.1	LOC100044439	XP_001472303.1	ILMN_2770066	006020487	S	1449	GCAGTGATCTCTGAGCTGGCGTGGGACTCTCCTATCCATCCACCCACCTG					PREDICTED: Mus musculus similar to cytochrome P450 CYP4F18 (LOC100044439), mRNA.					
Mus musculus	RefSeq	ILMN_231237	ILMN_231237	PCDHA11	NM_009960.1	NM_009960.1		12942	23956047	NM_009960.1	Pcdha11	NP_034090.1	ILMN_2946047	001660278	S	2012	GCGGCCAAGCTCCAAAGTCCTTTTCACAGGCATCAGGTCGTGCTTCAGCC	18	+	37172523-37172572	18qB3	Mus musculus protocadherin alpha 11 (Pcdha11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A830022B16Rik; Cnr7; Crnr7	A830022B16Rik; Cnr7; Crnr7
Mus musculus	RefSeq	ILMN_197611	ILMN_197611	LOC208642	XM_142686.2	XM_142686.2			38076838	XM_142686.2	LOC208642		ILMN_1220994	001260133	S	364	ACAAACCTTCAGCTGGGGGTGAGTGGCCAGCAGGAGAAACGTGACCAGCA										
Mus musculus	RefSeq	ILMN_200106	ILMN_311755	LOC100040885	XM_001475748.1	XM_001475748.1		100040885	149254029	XM_001475748.1	LOC100040885	XP_001475798.1	ILMN_1249936	001850670	S	1636	GGCAAGACCTGTGTCTATGGCCAGGGGGCAAGGCTTTGTTCCTGTTTGCA	5	-	93911295-93911344	5qE2	PREDICTED: Mus musculus similar to Expressed sequence AA792892, transcript variant 1 (LOC100040885), mRNA.					
Mus musculus	RefSeq	ILMN_209569	ILMN_311755	LOC100040885	XM_001475748.1	XM_001475748.1		100040885	149254029	XM_001475748.1	LOC100040885	XP_001475798.1	ILMN_2597051	000460735	S	2529	GGTACCTTTGCTACATAAAGTATTTACTTTCAAAAAGACTTGTATTTTAA	5	-	93910402-93910451	5qE2	PREDICTED: Mus musculus similar to Expressed sequence AA792892, transcript variant 1 (LOC100040885), mRNA.					
Mus musculus	Riken	ILMN_203508	ILMN_203508	4831413G18RIK	ri|4831413G18|PX00102O07|AK029196|4697					AK029196	4831413G18Rik		ILMN_2557844	006860646	S	4296	GGACAGTGCTTGCACAGACAAGTCAACCCCCAACATAGACATGTGCATGC										
Mus musculus	MEEBO	ILMN_195697	ILMN_195697	4930402E16RIK	scl33317.19_405				38142487	NM_198308	4930402E16Rik		ILMN_1250521	006520500	S	2	GCTCGGTCTGTAGGTTCTCATCCCCCACATCAGCCCTCTTTGTTCAAAAT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid [goid 6546] [evidence IEA]	Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein [goid 4047] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214124	ILMN_214124	SRPX2	NM_026838.1	NM_026838.1		68792	21703701	NM_026838.1	Srpx2	NP_081114.1	ILMN_2818294	002190139	S	1540	CAAGCAGGGTATTGACCGGGAACGCTATATGGAACCTGTCACCCCTGAGG	X	+	129277684-129277733	XqE3	Mus musculus sushi-repeat-containing protein, X-linked 2 (Srpx2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			SRP; SRPUL; 1110039C07Rik	SRP; SRPUL; 1110039C07Rik
Mus musculus	RefSeq	ILMN_186172	ILMN_253907	PDLIM1	NM_016861.3	NM_016861.3		54132	146134346	NM_016861.3	Pdlim1	NP_058557.1	ILMN_1234072	007560673	S	1274	CCCTGTCCCTTCACCCACACCTCAATGCACCTTCTTCACTTGGAGTCTTC				19qC3	Mus musculus PDZ and LIM domain 1 (elfin) (Pdlim1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]	Clim1	Clim1
Mus musculus	MEEBO	ILMN_224018	ILMN_224018	LUM	scl38510.3.1_11				6678739	NM_008524	Lum		ILMN_2773259	006650021	S	1190	AATATCCTTCTCGTTGCTGGTGGTATTACTTCATGGATTTTAATTAATGA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189952	ILMN_189952	4930445K14RIK	scl18342.1.40_0						4930445K14Rik		ILMN_2465890	005360523	S	7	GATCTTGTCTAGTCTGCCCACAGACACCTGACCATCGACCCCAGGTGTGT										
Mus musculus	MEEBO	ILMN_191705	ILMN_191705	AKR1B3	scl17956.1.1_169				31981908	NM_009658	Akr1b3		ILMN_2481458	005050273	S	14	GGGGGGACATGTAATTTATTTGGGTCAGCGACAAGTTAATCTTCCTGCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alditol + NADP+ = an aldose + NADPH + H+ [goid 4032] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218123	ILMN_218123	SSU72	NM_026899.2	NM_026899.2		68991	141803020	NM_026899.2	Ssu72	NP_081175.1	ILMN_1257298	006590497	S	870	CCTGCACAGCCACCTTTGTTGAAGCCACTTTTTCAGTGTGTTTTCCTTTC	4	+	155107710-155107759	4qE2	Mus musculus Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) (Ssu72), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]	1500011L16Rik; 2610101M12Rik; 1190002E22Rik	1500011L16Rik; 2610101M12Rik; 1190002E22Rik
Mus musculus	RefSeq	ILMN_200048	ILMN_200048	LOC381645	XM_358634.1	XM_358634.1			38080051	XM_358634.1	LOC381645		ILMN_1250584	004810176	S	92	GCATCCAGACGCTTGTTGTTCCTAGTCCCGATGAAGTCAAGGTCCCCTCG										
Mus musculus	Riken	ILMN_203631	ILMN_203631	MAPK8	ri|5730585A15|PX00093O23|AK030767|2813					AK030767	Mapk8		ILMN_1239233	001340768	S	2019	CTCTCAGACACACACACACAGGGGAGGGGGGTAGAAAGAGAGTTTTCCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of introducing a phosphate group into a JUN protein [goid 7258] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IMP]; The process of introducing a phosphate group into a JUN protein [goid 7258] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214722	ILMN_214722	RASSF9	NM_146240.4	NM_146240.4		237504	146149218	NM_146240.4	Rassf9	NP_666352.1	ILMN_1226106	002750332	S	1879	CCCCCCACAGCTTCTATGAGGCATGAATGATAGGAACGTAAAATTAGTTC				10qD1	Mus musculus Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 (Rassf9), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		MGC41694; AW322107	MGC41694; AW322107
Mus musculus	RefSeq	ILMN_219834	ILMN_228817	SLC5A10	NM_001033227.2	NM_001033227.2		109342	142361551	NM_001033227.2	Slc5a10	NP_001028399.1	ILMN_1222016	003170692	S	2097	CCTGGGTTGGACATGAAGGCCTAAGGAATAGAATGTGCCCACAGATAAAC	11	-	61486398-61486447	11qB2	Mus musculus solute carrier family 5 (sodium/glucose cotransporter), member 10 (Slc5a10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	C330021F16Rik; SGLT5	C330021F16Rik; SGLT5
Mus musculus	RefSeq	ILMN_221202	ILMN_221202	CPNE7	NM_170684.2	NM_170684.2		102278	92373430	NM_170684.2	Cpne7	NP_733785.1	ILMN_1256248	000150487	S	2005	CTGCACCCAACAGGCAAGGAGCAGGGTGTTCTGAAAGAAATGGGGCTGCA	8	+	125658685-125658734	8qE1	Mus musculus copine VII (Cpne7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW047065	AW047065
Mus musculus	RefSeq	ILMN_221640	ILMN_226459	1700057K13RIK	NM_028540.2	NM_028540.2		73435	141803467	NM_028540.2	1700057K13Rik	NP_082816.1	ILMN_1247752	007400209	S	684	CGTCTGGAGCTGCTTTCTAATTTATCTGTACTTCAACTTCGCCGAGGTGG	1	-	159029443-159029473:159029474-159029492	1qH1	Mus musculus RIKEN cDNA 1700057K13 gene (1700057K13Rik), mRNA.				MGC118391; MGC144290	MGC118391; MGC144290
Mus musculus	RefSeq	ILMN_216911	ILMN_216911	4930570C03RIK	NM_026353.2	NM_026353.2		67739	31560174	NM_026353.2	4930570C03Rik	NP_080629.1	ILMN_2912471	000270209	S	2448	TCCACTGACGATGTCCCACCAACATCCAGGAGGCGTTCTCCCAAGGACTT	15	+	97620648-97620697	15qF1	Mus musculus RIKEN cDNA 4930570C03 gene (4930570C03Rik), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_200421	ILMN_200421	LOC384263	XM_357531.1	XM_357531.1			38081778	XM_357531.1	LOC384263		ILMN_2538701	004610088	S	3	GGGTAGTGCTGGAAATCAAGGGGTCTTCAATAAGCCTGCTGGACCCATGG										
Mus musculus	RefSeq	ILMN_216320	ILMN_216320	SLC6A2	NM_009209.2	NM_009209.2		20538	31543742	NM_009209.2	Slc6a2	NP_033235.2	ILMN_2922875	005910717	S	5662	CCTGGCCCTGGTTGGTGAATGTGAAGTCAGGGGCACCTGTCCTTGCTCTA	8	+	95525338-95525387	8qC5	Mus musculus solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2 (Slc6a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IDA]; The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of, within or between cells [goid 15844] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of the membrane to the other [goid 8504] [evidence ISO]	Slc6a5; NET; NE-T	Slc6a5; NET; NE-T
Mus musculus	RefSeq	ILMN_216320	ILMN_216320	SLC6A2	NM_009209.2	NM_009209.2		20538	31543742	NM_009209.2	Slc6a2	NP_033235.2	ILMN_2669736	001070279	S	1188	GTATCCAGAAGCCATCTCTACTCTGTCAGGATCCACGTTCTGGGCCGTCC	8	+	95516727-95516776	8qC5	Mus musculus solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2 (Slc6a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IDA]; The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of, within or between cells [goid 15844] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of the membrane to the other [goid 8504] [evidence ISO]	Slc6a5; NET; NE-T	Slc6a5; NET; NE-T
Mus musculus	RefSeq	ILMN_216320	ILMN_216320	SLC6A2	NM_009209.2	NM_009209.2		20538	31543742	NM_009209.2	Slc6a2	NP_033235.2	ILMN_1247040	004120521	S	861	CGTCACACTGCCCGGTGCCTCCAATGGCATCAATGCCTACTTGCACATTG	8	+	95512977-95513026	8qC5	Mus musculus solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2 (Slc6a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IDA]; The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of, within or between cells [goid 15844] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of the membrane to the other [goid 8504] [evidence ISO]	Slc6a5; NET; NE-T	Slc6a5; NET; NE-T
Mus musculus	MEEBO	ILMN_190554	ILMN_190554	SCL0003955.1_3	scl0003955.1_3	AK041138.1			26088279	AK041138.1	scl0003955.1_3		ILMN_2471161	006760500	S	18	CCACCACCTCCTATCTGGATTTAAAGATAGGGGAGCAGGCCGTAAGCAGC										
Mus musculus	RefSeq	ILMN_199937	ILMN_311852	PUSL1	XM_001476573.1	XM_001476573.1		433813	149253447	XM_001476573.1	Pusl1	XP_001476623.1	ILMN_1260144	007200750	S	861	CTCGAGTTGCTCCAGCCCGTGGCCTGTTCTTGAAGTCAGTGCTGTATGAC				4qE2	PREDICTED: Mus musculus pseudouridylate synthase-like 1, transcript variant 1 (Pusl1), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]		
Mus musculus	Riken	ILMN_205597	ILMN_205597	C030038O19RIK	ri|9630054L13|PX00117G09|AK036299|2721					AK036299	C030038O19Rik		ILMN_2573778	005900161	S	2519	CAGGCTGGTCTGTTCTTTTTCACACATGGCTAACCTATCCCCCAATCCCA										
Mus musculus	RefSeq	ILMN_242647	ILMN_242647	PHF8	NM_177201.2	NM_177201.2		320595	31343052	NM_177201.2	Phf8	NP_796175.1	ILMN_2879921	004050398	S	3009	CATGATTGGGGAGAATCTTTAAGGTGTTGCAGGTAGGGGAGGTAGGCATG	X	+	146966453-146966502	XqF3	Mus musculus PHD finger protein 8 (Phf8), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9830141C09Rik; mKIAA1111	9830141C09Rik; mKIAA1111
Mus musculus	RefSeq	ILMN_216517	ILMN_216517	OLFR156	NM_019474.1	NM_019474.1		29846	11276076	NM_019474.1	Olfr156	NP_062347.1	ILMN_2672012	006270056	S	1158	GTGAGTGACTGGGCTGGACCATGGACTCTTTAGAATCAAGACACTGGTTG	4|NT_039296.1	+	36740-36789	4qB1	Mus musculus olfactory receptor 156 (Olfr156), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123974; MGC123977; MGC123975; MOR262-6; OR37B; Olfr37b; mOR37b	MGC123974; MGC123977; MGC123975; MOR262-6; OR37B; Olfr37b; mOR37b
Mus musculus	Riken	ILMN_206436	ILMN_206436	C230046E07RIK	ri|C230046E07|PX00175I15|AK082395|2582					AK082395	C230046E07Rik		ILMN_2580065	004260100	S	2284	GTGCACTATACACATGAGGAATGTCATCATTTTAGCACATTCTGAGAAGG										
Mus musculus	RefSeq	ILMN_201259	ILMN_201259	LOC384998	XM_357980.1	XM_357980.1			38090229	XM_357980.1	LOC384998		ILMN_1242600	004570523	S	95	ATGGAGCATGGAGCAGGTCAGGGCGAGAGGCTTGGGAGATGAACCGTGAA										
Mus musculus	RefSeq	ILMN_258839	ILMN_258839	ZFP68	NM_001044747.1	NM_001044747.1		24135	113680983	NM_001044747.1	Zfp68	NP_001038212.1	ILMN_3133085	004860242	A	4108	TCCCATGGATAGGTCATGGTCGGCGAGAGGGTTAGCAAGCACTGTTTAAC	5	-	139045357-139045406	5qG2	Mus musculus zinc finger protein 68 (Zfp68), transcript variant 2, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	KRAZ2; mszf49; mszf22	KRAZ2; mszf49; mszf22
Mus musculus	RefSeq	ILMN_217442	ILMN_217442	3830406C13RIK	NM_178141.2	NM_178141.2		218734	114051362	NM_178141.2	3830406C13Rik	NP_835277.1	ILMN_3154231	005890180	A	1945	GGGCTCCAGCCATGCAGTTGATTTAGCAGGGAAATGCAGGTTTCTCAGCA	14	+	13135274-13135323	14qA1	Mus musculus RIKEN cDNA 3830406C13 gene (3830406C13Rik), transcript variant 2, mRNA.				MGC36213; AV167947	MGC36213; AV167947
Mus musculus	RefSeq	ILMN_217442	ILMN_217442	3830406C13RIK	NM_178141.2	NM_178141.2		218734	114051362	NM_178141.2	3830406C13Rik	NP_835277.1	ILMN_2683277	003170221	S	2022	GTAGACAGGAACACGAGGAAGGGCTCTTTTTAAACATCCAGTCTCCCAGC	14	+	13135351-13135400	14qA1	Mus musculus RIKEN cDNA 3830406C13 gene (3830406C13Rik), transcript variant 2, mRNA.				MGC36213; AV167947	MGC36213; AV167947
Mus musculus	RefSeq	ILMN_185613	ILMN_257947	NUS1	NM_030250.1	NM_030250.1		52014	13384839	NM_030250.1	Nus1	NP_084526.1	ILMN_2614895	000460753	S	1013	CAGTATGCAGCTTGCGAACAGCGACTGGGAAAGTAATGGTCCCTACTTGC	10	+	52156450-52156473:52156474-52156499	10qB3	Mus musculus nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) (Nus1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	D10Ertd438e; AW538011; 1600027K07Rik; MGC7199; AU019165; BC003223	D10Ertd438e; AW538011; 1600027K07Rik; MGC7199; AU019165; BC003223
Mus musculus	RefSeq	ILMN_196357	ILMN_311430	LOC100045250	XR_031459.1	XR_031459.1		100045250	149266890	XR_031459.1	LOC100045250		ILMN_2753714	001500082	S	799	CAAGCTCTGATGGTGCTGAGCGATAGCCAACTCAATCTGCTGGCCCAGTC					PREDICTED: Mus musculus hypothetical protein LOC100045250 (LOC100045250), misc RNA.					
Mus musculus	RefSeq	ILMN_196357	ILMN_311430	LOC100045250	XR_031459.1	XR_031459.1		100045250	149266890	XR_031459.1	LOC100045250		ILMN_1214305	006980050	S	1148	GTCCTGGATACATTTGATATATTGCACCATGCATGTTTTAGGCCAGTGGG					PREDICTED: Mus musculus hypothetical protein LOC100045250 (LOC100045250), misc RNA.					
Mus musculus	MEEBO	ILMN_186716	ILMN_186716	SLC5A5	scl34686.15_590				17298677	NM_053248	Slc5a5		ILMN_1245214	000270086	S	8	GACACAGTGTCTTAAGGTAGTCTGGCTGATGTCTGGCTATCACTCAGCGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: iodide(out) + Na+(out) = iodide(in) + Na+(in) [goid 8507] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196488	ILMN_196488	A330042I05RIK	XM_128977.1	XM_128977.1			20878970	XM_128977.1	A330042I05Rik		ILMN_1232578	002750164	S	542	ACCAGGGCTACCAGATCCTGCAGTTGGGAAGTTGTCCGGCTGTACCAGCA										
Mus musculus	RefSeq	ILMN_210327	ILMN_210327	TMEM42	NM_025339.3	NM_025339.3		66079	142370779	NM_025339.3	Tmem42	NP_079615.1	ILMN_2604467	001070228	S	712	CCTGTAAGGGGAAGCTAACCACCACAGTATGAGGCCCAAGTCCTTCAGTG	9	+	122932276-122932325	9qF4	Mus musculus transmembrane protein 42 (Tmem42), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AV003444; 0610027O18Rik; 4933429E06Rik; MGC29956; D9Ertd662e	AV003444; 0610027O18Rik; 4933429E06Rik; MGC29956; D9Ertd662e
Mus musculus	RefSeq	ILMN_197258	ILMN_197258	LOC381375	XM_355340.1	XM_355340.1			38074825	XM_355340.1	LOC381375		ILMN_2527490	006560577	S	928	TGGACGCCATCTCTCGTTCCCAGCTTTACCTGGACGACCTCTTTTCTGAC										
Mus musculus	RefSeq	ILMN_244125	ILMN_244125	OTTMUSG00000005491	NM_001013783.1	NM_001013783.1		432552	62000655	NM_001013783.1	OTTMUSG00000005491	NP_001013805.1	ILMN_3161932	003360398	S	1890	GGCCTACTCCAAAAGCAGGGGACACCTCATGTGATAGAGGAGGGGTAGAC	11	+	46221189-46221238	11qB1.1	Mus musculus predicted gene, OTTMUSG00000005491 (OTTMUSG00000005491), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_201516	ILMN_201516	PSG18	NM_011963.1	NM_011963.1		26438	6755189	NM_011963.1	Psg18	NP_036093.1	ILMN_2717406	004570605	S	1153	AATAGACAGCAATGTGAGAGTTGTAACAGCACATGTCCAAGTCAACATCC	7	-	18934433-18934482	7qA2	Mus musculus pregnancy specific glycoprotein 18 (Psg18), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators [goid 9691] [evidence TAS]		Cea3; Cea-3; mmCGM6	Cea3; Cea-3; mmCGM6
Mus musculus	RefSeq	ILMN_201516	ILMN_201516	PSG18	NM_011963.1	NM_011963.1		26438	6755189	NM_011963.1	Psg18	NP_036093.1	ILMN_1220748	001110692	S	464	CCCTGTACTTGCACGTGTACTCCTCTCTTTTCATCTGTGTGCGTCCTACT	7	-	18936426-18936454:18938654-18938674	7qA2	Mus musculus pregnancy specific glycoprotein 18 (Psg18), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators [goid 9691] [evidence TAS]		Cea3; Cea-3; mmCGM6	Cea3; Cea-3; mmCGM6
Mus musculus	RefSeq	ILMN_201516	ILMN_201516	PSG18	NM_011963.1	NM_011963.1		26438	6755189	NM_011963.1	Psg18	NP_036093.1	ILMN_2662491	002340468	S	469	GTACTTGCACGTGTACTCCTCTCTTTTCATCTGTGTGCGTCCTACTACCC	7	-	18936421-18936454:18938654-18938669	7qA2	Mus musculus pregnancy specific glycoprotein 18 (Psg18), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators [goid 9691] [evidence TAS]		Cea3; Cea-3; mmCGM6	Cea3; Cea-3; mmCGM6
Mus musculus	Riken	ILMN_205641	ILMN_205641	9530085L02RIK	ri|9530085L02|PX00114E03|AK035675|3635					AK035675	9530085L02Rik		ILMN_1245580	000540026	S	3316	AGGATGGAGAGGTTCTTTCTGTCACCACTCATGCATGTTAAATGGCCCCC										
Mus musculus	MEEBO	ILMN_216174	ILMN_216174	2210408O09RIK	scl072366.2_140	NM_028212.1			27229152	NM_028212.1	2210408O09Rik		ILMN_2668086	004830403	S	1196	TCGCACCTCAAGGAACAGGCTGGCATAGGAGGCTGGCAATCATCTGCATT										
Mus musculus	RefSeq	ILMN_210311	ILMN_210311	CTBS	NM_028836.3	NM_028836.3		74245	146149339	NM_028836.3	Ctbs	NP_083112.1	ILMN_2604319	004850576	S	2251	TGATCCCCTTCCAAATTGGAATAAGTGACTAATCAACTGTCTGTTATGAC				3qH2	Mus musculus chitobiase, di-N-acetyl- (Ctbs), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]	CTB; 2210401K11Rik	CTB; 2210401K11Rik
Mus musculus	RefSeq	ILMN_225443	ILMN_225443	TMTC4	NM_028651.1	NM_028651.1		70551	58037338	NM_028651.1	Tmtc4	NP_082927.1	ILMN_2897110	001660450	S	2280	CCTTGCAGCTTGACCCTGTGGCAGTAGGCACCAAGGAGAATTACAGTCTT	14	-	122055215-122055264	14qE5	Mus musculus transmembrane and tetratricopeptide repeat containing 4 (Tmtc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930403J22Rik; 5730419O14Rik	4930403J22Rik; 5730419O14Rik
Mus musculus	RefSeq	ILMN_220105	ILMN_220105	NIF3L1	NM_022988.2	NM_022988.2		65102	41056092	NM_022988.2	Nif3l1	NP_075364.2	ILMN_2717690	004200181	S	1290	GGCTCAACAAAAGCCATAGCTCATTCGGTAAAACTGTCTGTAAAGAGTAC	1	+	58518298-58518347	1qC1.3	Mus musculus Ngg1 interacting factor 3-like 1 (S. pombe) (Nif3l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			MGC107114; 1110030G24Rik	MGC107114; 1110030G24Rik
Mus musculus	RefSeq	ILMN_220105	ILMN_220105	NIF3L1	NM_022988.2	NM_022988.2		65102	41056092	NM_022988.2	Nif3l1	NP_075364.2	ILMN_2738837	000730520	S	908	TTGTGGCCCTGTGTGCTGGTTCTGGGGGCAGTGTTCTACAAGGAGTGGAG	1	+	58514639-58514688	1qC1.3	Mus musculus Ngg1 interacting factor 3-like 1 (S. pombe) (Nif3l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			MGC107114; 1110030G24Rik	MGC107114; 1110030G24Rik
Mus musculus	RefSeq	ILMN_184224	ILMN_232155	GM967	XM_912427.3	XM_912427.3		381217	149270626	XM_912427.3	Gm967	XP_917520.3	ILMN_2416876	000460537	S	2412	TTGGCAACAACAAGAGCCATGAGGGGTGAGGCAGGCAAAGGCTAGGGAGC				19qB	PREDICTED: Mus musculus gene model 967, (NCBI) (Gm967), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213332	ILMN_213332	1810010D01RIK	scl30433.3.1_19	XM_358679.1			38087604	XM_358679.1	1810010D01Rik		ILMN_2636041	002940180	S	661	AAAGGGCTCGATTGTCTGCGGCAGCCGGAAAGGCCTGGAGGAGGCGGCCG										
Mus musculus	Riken	ILMN_203583	ILMN_203583	A230086C11RIK	ri|A230086C11|PX00130E13|AK039020|1352					AK039020	A230086C11Rik		ILMN_1237152	004560431	S	993	GCTCTCTAACAGCAATGGCTTCCCCCATCTCCAACTGCAGCAAGCTGAGC										
Mus musculus	RefSeq	ILMN_223399	ILMN_223399	KCNV1	NM_026200.1	NM_026200.1		67498	28460684	NM_026200.1	Kcnv1	NP_080476.1	ILMN_2763517	003190152	S	3449	ATTTCCATGGCATGAGTTTTTTTAGTATAATTTTTCTACTTTAATTGTGA	15	-	44937248-44937297	15qB3.3	Mus musculus potassium channel, subfamily V, member 1 (Kcnv1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	vibe; 2700023A03Rik	vibe; 2700023A03Rik
Mus musculus	RefSeq	ILMN_223399	ILMN_223399	KCNV1	NM_026200.1	NM_026200.1		67498	28460684	NM_026200.1	Kcnv1	NP_080476.1	ILMN_2796420	007330347	S	4110	TGTGCATTGATCTTGTTGTGCTTAGAGGGCTTTGGACCCCCTATTCCCTC	15	-	44936587-44936636	15qB3.3	Mus musculus potassium channel, subfamily V, member 1 (Kcnv1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	vibe; 2700023A03Rik	vibe; 2700023A03Rik
Mus musculus	RefSeq	ILMN_213875	ILMN_213875	1110002H13RIK	NM_025376.1	NM_025376.1		66139	13384749	NM_025376.1	1110002H13Rik	NP_079652.1	ILMN_2641700	006020189	S	772	GCCAAGCTGACCTTCTCCACCCTCTGCTGCACTTGTGTCTGACTATACCC	2	-	26884187-26884196:26884197-26884236	2qA3	Mus musculus RIKEN cDNA 1110002H13 gene (1110002H13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI131587	AI131587
Mus musculus	RefSeq	ILMN_211662	ILMN_211662	GPR171	NM_173398.2	NM_173398.2		229323	141802624	NM_173398.2	Gpr171	NP_775574.1	ILMN_1256824	002370039	S	1582	CAGGAAGCCCTTCAGCGATACCTTAAAGGTCTTCTGTGACCTAGAAAAAT	3	-	58900914-58900963	3qD	Mus musculus G protein-coupled receptor 171 (Gpr171), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	H963; A630006E05; F730001G15Rik	H963; A630006E05; F730001G15Rik
Mus musculus	RefSeq	ILMN_200666	ILMN_200666	LOC381804	XM_358656.1	XM_358656.1			38085016	XM_358656.1	LOC381804		ILMN_1232892	007570543	S	378	GCCTACTGGCTGGTAGAGCAGATCACTTGGCAGCGGACTCCAGCCTATCT										
Mus musculus	RefSeq	ILMN_217453	ILMN_245923	ASNA1	NM_019652.1	NM_019652.1		56495	12025541	NM_019652.1	Asna1	NP_062626.1	ILMN_2683374	003140338	S	955	CATTGTAAAGCTGCCACTGTTACCTCACGAGGTTCGGGGAGCCGACAAAG	8	-	87542078-87542127	8qC3	Mus musculus arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) (Asna1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides [goid 46685] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + arsenite(in) = ADP + phosphate + arsenite(out) [goid 15446] [evidence IEA]	1810048H22Rik; ArsA	1810048H22Rik; ArsA
Mus musculus	MEEBO	ILMN_189287	ILMN_189287	SCL0001828.1_20	scl0001828.1_20	AK080946.1			26099573	AK080946.1	scl0001828.1_20		ILMN_1225015	005390537	S	19	CCGGGTGGACGCTTCCTGAGCGGTGGCGGCCGTCGCAGCCGGGTCGCAAG										
Mus musculus	RefSeq	ILMN_192060	ILMN_192060	UNC5D	NM_153135.1	NM_153135.1		210801	23346574	NM_153135.1	Unc5d	NP_694775.1	ILMN_2819736	003370673	S	3554	GCCCCACGGGCCAGATGATCCTGAGACCAGATTTTCAGATTCCAACCGAC	8	-	30118269-30118318	8qA2-qA3	Mus musculus unc-5 homolog D (C. elegans) (Unc5d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D930029E11Rik; KIAA1777; Unc5h4; mKIAA1777	D930029E11Rik; KIAA1777; Unc5h4; mKIAA1777
Mus musculus	RefSeq	ILMN_209801	ILMN_209801	FRMD4B	NM_145148.1	NM_145148.1		232288	21553102	NM_145148.1	Frmd4b	NP_660130.1	ILMN_2599341	005050403	S	4731	GATAACTGCTCCTTTGTCATTTGTATCACTAGAAATGAAGTTCGGGGAAA	6	-	97237033-97237082	6qD3	Mus musculus FERM domain containing 4B (Frmd4b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	GRSP1; R74720; 6030440G05Rik; GOBLIN; mKIAA1013; C87375	GRSP1; R74720; 6030440G05Rik; GOBLIN; mKIAA1013; C87375
Mus musculus	RefSeq	ILMN_217607	ILMN_217607	PLCH2	NM_175556.3	NM_175556.3		269615	121583636	NM_175556.3	Plch2	NP_780765.2	ILMN_2925433	006280564	S	5235	GGAAGCAAGAAACAGCATTGTCCACCTGTCCTTCTGGGTGGTTCCCACGT	4	-	154357523-154357572	4qE2	Mus musculus phospholipase C, eta 2 (Plch2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways involving phosphoinositides, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of inositol. They are important constituents of cell membranes [goid 30384] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IDA]	A930027K05Rik; Plc-eta2; Plcl4; PLCeta2	A930027K05Rik; Plc-eta2; Plcl4; PLCeta2
Mus musculus	RefSeq	ILMN_219122	ILMN_219122	NELL2	NM_016743.1	NM_016743.1		54003	7949112	NM_016743.1	Nell2	NP_058023.1	ILMN_2869715	003180315	S	2223	CTGCTTGCAAGGAGAAGTTGACTGTTGGCCCCTGGCTTGCCCAGAGGTAG	15	-	95057444-95057488:95059477-95059481	15qE3-qF1	Mus musculus NEL-like 2 (chicken) (Nell2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	A330108N19Rik; mel91; R75516	A330108N19Rik; mel91; R75516
Mus musculus	MEEBO	ILMN_189967	ILMN_189967	HIVEP3	scl25023.8_94				41054732	NM_010657	Hivep3		ILMN_2466021	002350300	S	7	CCTCAGTGTGGTGATCAAGGAGGAAGGGAACGGTGCAGGCAAATGTAAGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]		
Mus musculus	MEEBO	ILMN_189967	ILMN_189967	HIVEP3	scl25023.8_94				41054732	NM_010657	Hivep3		ILMN_2627929	000150386	S	8850	GTTCACCTCTGTCCCTGAGGAACAACACGTCACATTTCCTTCATGGCTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]		
Mus musculus	RefSeq	ILMN_184184	ILMN_238150	ZFP184	NM_183014.1	NM_183014.1		193452	33942077	NM_183014.1	Zfp184	NP_898835.1	ILMN_1257607	002120025	S	2618	GTAAATTTTTCTCTGTCACATGGTGGGATGGAGAGCCCATTGGGCTGTTC	13	+	22052269-22052318	13qA3.1	Mus musculus zinc finger protein 184 (Kruppel-like) (Zfp184), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC62472; 4930500C15Rik	MGC62472; 4930500C15Rik
Mus musculus	RefSeq	ILMN_189548	ILMN_242533	SEMA6A	NM_018744.2	NM_018744.2		20358	67846118	NM_018744.2	Sema6a	NP_061214.2	ILMN_2705946	001990477	S	3139	GGCTACCAGCACGAGTACGTAGATCAGCCCAAAATGAGCGAGGTGGTGGC	18	-	47408613-47408662	18qC	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A (Sema6a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence NAS]; Any process by which a centrosome is transported to, and/or maintained in, a specific location within the cell [goid 51642] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with semaphorin receptors [goid 30215] [evidence IPI]; Interacting selectively with semaphorin receptors [goid 30215] [evidence IGI]	Sema6A-1; AI851735; 9330158E07; A730020P05Rik; VIa; Semaq	Sema6A-1; AI851735; 9330158E07; A730020P05Rik; VIa; Semaq
Mus musculus	RefSeq	ILMN_189548	ILMN_242533	SEMA6A	NM_018744.2	NM_018744.2		20358	67846118	NM_018744.2	Sema6a	NP_061214.2	ILMN_1215472	006180619	S	3115	GTGGTCCTGCCCATCACGCAGCAGGGCTACCAGCACGAGTACGTAGATCA	18	-	47408637-47408686	18qC	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A (Sema6a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence NAS]; Any process by which a centrosome is transported to, and/or maintained in, a specific location within the cell [goid 51642] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with semaphorin receptors [goid 30215] [evidence IPI]; Interacting selectively with semaphorin receptors [goid 30215] [evidence IGI]	Sema6A-1; AI851735; 9330158E07; A730020P05Rik; VIa; Semaq	Sema6A-1; AI851735; 9330158E07; A730020P05Rik; VIa; Semaq
Mus musculus	RefSeq	ILMN_189548	ILMN_242533	SEMA6A	NM_018744.2	NM_018744.2		20358	67846118	NM_018744.2	Sema6a	NP_061214.2	ILMN_2462284	002370019	S	6464	CCTCAGTTGTGTTACGGAGACCCATGTCAAAACCCACATTCCTACACCCC	18	-	47405288-47405337	18qC	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A (Sema6a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence NAS]; Any process by which a centrosome is transported to, and/or maintained in, a specific location within the cell [goid 51642] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with semaphorin receptors [goid 30215] [evidence IPI]; Interacting selectively with semaphorin receptors [goid 30215] [evidence IGI]	Sema6A-1; AI851735; 9330158E07; A730020P05Rik; VIa; Semaq	Sema6A-1; AI851735; 9330158E07; A730020P05Rik; VIa; Semaq
Mus musculus	MEEBO	ILMN_214378	ILMN_214378	RCOR3	scl15754.9.1_26	NM_144814.1			21450184	NM_144814.1	Rcor3		ILMN_2721954	002140520	S	1180	GTAAACTACAGGCGTCGGTTTAACTTAGAGGAGGTATTGCAGGAGTGGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210234	ILMN_210234	SLC39A7	scl50031.6.1_11	NM_008202.1			6680146	NM_008202.1	Slc39a7		ILMN_2603540	007100039	S	1685	CTGGGGGGTGTTGCCATGATGGTACTGATTGCCCATCTTGAGTGAGGGGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]		
Mus musculus	Riken	ILMN_204719	ILMN_204719	B3GAT1	ri|A530099I12|PX00143N24|AK041316|1667					AK041316	B3gat1		ILMN_1225775	004490349	S	1491	GCCAGAGTGGCCAGTGCAATAGACAAGTGGCACCAGTTTGGGATACATCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence TAS]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]; Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 15018] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221388	ILMN_238108	1190003J15RIK	NM_029821.2	NM_029821.2		76974	142347753	NM_029821.2	1190003J15Rik	NP_084097.1	ILMN_2734924	006660475	S	449	CCCATGGTCCTACACCACCTACCGGGGGAGTTAAAGTGATGTGTTACCTG	7	+	148023641-148023674:148023675-148023690	7qF5	Mus musculus RIKEN cDNA 1190003J15 gene (1190003J15Rik), mRNA. XM_133915 XM_900078 XM_900080 XM_900083 XM_917938 XM_925372 XM_925374 XM_925375	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine [goid 6144] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IDA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Catalysis of the reaction: 5-hydroxyisourate + H2O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate [goid 33971] [evidence IEA]	Urah; 2810420C16Rik	Urah; 2810420C16Rik
Mus musculus	MEEBO	ILMN_218522	ILMN_218522	1700095G12RIK	scl40013.3.1_12	XM_126335.2			38091437	XM_126335.2	1700095G12Rik		ILMN_2696841	001450035	S	666	CCTATGTGTATACTGTAAATCCTCCACCTCCCAGTCCAGAGGCTTTGAGC										
Mus musculus	RefSeq	ILMN_211670	ILMN_211670	OLFR131	NM_146867.1	NM_146867.1		258867	22129142	NM_146867.1	Olfr131	NP_667078.1	ILMN_2997843	002600731	S	789	CATGGCACCGAAGAGCAGCTCAGCCAAACTGAAGGGCAAGCTTTTGGCAC	17	-	38219083-38219132	17qB1	Mus musculus olfactory receptor 131 (Olfr131), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-4	MOR256-4
Mus musculus	RefSeq	ILMN_215523	ILMN_215523	DUSP8	NM_008748.2	NM_008748.2		18218	142388432	NM_008748.2	Dusp8	NP_032774.1	ILMN_1228031	001430470	S	2222	TTTAAGCTAGTGATCTGGCAACTGTGCGGGGCGGCCCTAAAGCTCTGTTT	7	-	149267581-149267630	7qF5	Mus musculus dual specificity phosphatase 8 (Dusp8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	Nttp1	Nttp1
Mus musculus	MEEBO	ILMN_188253	ILMN_188253	SCL000055.1_1_REVCOMP	scl000055.1_1_REVCOMP						scl000055.1_1_REVCOMP		ILMN_2451101	004560142	S	10	GTTTTCCAGCAGATGCCTCTTTGTTTTAATATATTAAAATCTTGCAAAAC										
Mus musculus	RefSeq	ILMN_222911	ILMN_222911	IL12B	NM_008352.2	NM_008352.2		16160	133892765	NM_008352.2	Il12b	NP_032378.1	ILMN_2756639	004390600	S	1199	GGAAGACATTAAGGAAGAAAAATTTAAACTCAGGATGGAAGAGTCCCCCA	11	+	44226767-44226816	11qB1.1	Mus musculus interleukin 12b (Il12b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that is composed of an interleukin-12 alpha and an interleukin-12 beta subunit and is secreted into the extracellular space [goid 43514] [evidence IDA]; A protein complex that is composed of an interleukin-12 alpha and an interleukin-12 beta subunit and is secreted into the extracellular space [goid 43514] [evidence IGI]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]	 [goid 4896] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Interacting selectively with the alpha subunit of interleukin-12 [goid 42164] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	Il12p40; Il-12b; p40; Il-12p40	Il12p40; Il-12b; p40; Il-12p40
Mus musculus	RefSeq	ILMN_215082	ILMN_215082	CARS	NM_013742.2	NM_013742.2		27267	31980753	NM_013742.2	Cars	NP_038770.2	ILMN_2887824	000150309	S	2905	ACTCAGCCTAACGGATCCCCCTGAGTCCCAGACAAAAGCCACTCAGTTGG	7	-	143366853-143366902	7qF5	Mus musculus cysteinyl-tRNA synthetase (Cars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6423] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys) [goid 4817] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	CA3	CA3
Mus musculus	RefSeq	ILMN_215559	ILMN_215559	1110018G07RIK	NM_178065.3	NM_178065.3		68497	40538837	NM_178065.3	1110018G07Rik	NP_835166.2	ILMN_2661005	003420075	S	4803	TGGGAGACCAGCTGCCCTCCTGGCTTTTGGCTTTTTGGTGTCCTTGAAGG	12	-	86259248-86259297	12qD2	Mus musculus RIKEN cDNA 1110018G07 gene (1110018G07Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	AI649076; mKIAA0317; AW610792	AI649076; mKIAA0317; AW610792
Mus musculus	RefSeq	ILMN_200806	ILMN_248723	EG626305	XM_890897.2	XM_890897.2		626305	94380127	XM_890897.2	EG626305	XP_895990.1	ILMN_2540079	006370452	S	198	ACTGCAAAAATCAAGCAATGTGTCGATAGCACCTTGACAGAGGAAGACAA	7	+	32498000-32498049	7qB1	PREDICTED: Mus musculus predicted gene, EG626305 (EG626305), mRNA.					
Mus musculus	Riken	ILMN_202957	ILMN_202957	CACNB2	ri|A930022N14|PX00066N04|AK044560|2145					AK044560	Cacnb2		ILMN_2553612	003120039	S	1938	GGATGGAAGGAGAAAGATGGGAAGACTTTATCTTCCTGTGGGTGGCTGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence TAS]		
Mus musculus	MEEBO	ILMN_223721	ILMN_223721	GNG7	scl37714.6_223	NM_010319.2			31542901	NM_010319.2	Gng7		ILMN_1216625	000670139	S	2973	CCTAAGGAGAAGGTTGGTGGGCATGGGGGGGTGTATCCTACACAGAAGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses guanylyl cyclase activity [goid 7168] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IMP]		
Mus musculus	Riken	ILMN_202525	ILMN_202525	LDLR	ri|D030054N16|PX00093N09|AK018697|1736					AK018697	Ldlr		ILMN_1233469	000870243	S	1429	ACTCTTGCCTTACAGGTAGCTCTGGATTCTGTCCCCAGTGCATCGCAACC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42159] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42159] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42159] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IGI]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IGI]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with low-density lipoprotein, one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 30169] [evidence IDA]; Combining with a very-low-density lipoprotein to initiate a change in cell activity [goid 30229] [evidence IDA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IMP]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IDA]		
Mus musculus	RefSeq	ILMN_216644	ILMN_216644	ACSS2	NM_019811.3	NM_019811.3		60525	133892533	NM_019811.3	Acss2	NP_062785.2	ILMN_1231116	003130706	S	164	GAGGTCAGACGCTCGGCGCACGTCCCCTCTCTGCAGCGCTACCGCGAGCT	2	+	155343942-155343991	2qH1	Mus musculus acyl-CoA synthetase short-chain family member 2 (Acss2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated [goid 6085] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IDA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AceCS1; 1110017C11Rik; ACAS; Acs1; Acas2; Acas1	AceCS1; 1110017C11Rik; ACAS; Acs1; Acas2; Acas1
Mus musculus	RefSeq	ILMN_216644	ILMN_216644	ACSS2	NM_019811.3	NM_019811.3		60525	133892533	NM_019811.3	Acss2	NP_062785.2	ILMN_2734181	004570333	S	2594	CCTTGCAGATGGTAGCATTGTCTACCAGTTGGTTCAGTCTCCATAGGACT	2	+	155388240-155388289	2qH1	Mus musculus acyl-CoA synthetase short-chain family member 2 (Acss2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated [goid 6085] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IDA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AceCS1; 1110017C11Rik; ACAS; Acs1; Acas2; Acas1	AceCS1; 1110017C11Rik; ACAS; Acs1; Acas2; Acas1
Mus musculus	MEEBO	ILMN_216532	ILMN_216532	2900052N01RIK	scl36994.3.1_0	NM_175192.2			31340843	NM_175192.2	2900052N01Rik		ILMN_2672162	001820521	S	1795	CTGCTAGCCAAGGAGTACAGTCTTATCTGAATCCCAGAGGCACATGCCCT										
Mus musculus	RefSeq	ILMN_186725	ILMN_331083	LOC100044430	XM_001472240.1	XM_001472240.1		100044430	149246426	XM_001472240.1	LOC100044430	XP_001472290.1	ILMN_1233449	002190133	S	966	ATCTGGGAAAGCAGATCAGCCTCCCTGTTGTGAAGGACCCACAGCCACAT					PREDICTED: Mus musculus similar to Interferon activated gene 205 (LOC100044430), mRNA.					
Mus musculus	MEEBO	ILMN_218284	ILMN_218284	4833444G19RIK	scl36751.1.1150_295	NM_177062.2			31342719	NM_177062.2	4833444G19Rik		ILMN_2693934	007550592	S	1989	GGCCACCATTGCCACTACACTTAAATGCACACACCCACACAACCATACCT										
Mus musculus	RefSeq	ILMN_209763	ILMN_209763	LNX2	NM_080795.3	NM_080795.3		140887	34328410	NM_080795.3	Lnx2	NP_542985.3	ILMN_2779913	004640521	S	3701	GATCCTGAAGTGCAATTGACGTGAAACAGTGTGTCCTGCTCCCCAGGTAC	5	-	147828980-147829029	5qG3	Mus musculus ligand of numb-protein X 2 (Lnx2), mRNA.		The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IDA]	AW209022; 9630046H24	AW209022; 9630046H24
Mus musculus	RefSeq	ILMN_209763	ILMN_209763	LNX2	NM_080795.3	NM_080795.3		140887	34328410	NM_080795.3	Lnx2	NP_542985.3	ILMN_2598990	000770164	S	3466	ACCTCCTCAGCCAGTATTGCTGGGCTTTGTATCCCTGTCGCTGGTTCTTC	5	-	147829215-147829264	5qG3	Mus musculus ligand of numb-protein X 2 (Lnx2), mRNA.		The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IDA]	AW209022; 9630046H24	AW209022; 9630046H24
Mus musculus	Riken	ILMN_206275	ILMN_206275	D330004F16RIK	ri|D330004F16|PX00191A07|AK084474|1720					AK084474	D330004F16Rik		ILMN_2578895	000610301	S	1264	GGGGGAATTGTACTCCCCAAGGTCGCCAAAAGCACATCTTGTTCTCTTAC										
Mus musculus	Riken	ILMN_206182	ILMN_206182	TEP1	ri|E330014B22|PX00212I11|AK087740|1275					AK087740	Tep1		ILMN_1246512	006770241	S	964	CAAGGCACACACAGAATGGGTTGGCGAGATGGGTCAGCATTGAGAACACT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISO]	The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IGI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]		
Mus musculus	MEEBO	ILMN_191105	ILMN_191105	TUBA6	scl022146.5_240	XM_147357.1			20982684	XM_147357.1	Tuba6		ILMN_2476139	006840021	S	4	ATGAGGAGGTTGGGGCAGATAGTGCTGAAGGAGACGATGAGGGTGAGGAA										
Mus musculus	RefSeq	ILMN_226166	ILMN_226166	FRMPD1	NM_001081172.1	NM_001081172.1		666060	124487184	NM_001081172.1	Frmpd1	NP_001074641.1	ILMN_2995023	006980246	S	618	GAGAACGGACAGACCAAAGCTTTCAAGTTTGAGGCAAACACAACTGTGAA				4qB1	Mus musculus FERM and PDZ domain containing 1 (Frmpd1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC031840; mKIAA0967	BC031840; mKIAA0967
Mus musculus	MEEBO	ILMN_217081	ILMN_217081	BCL2A1C	scl0012046.1_196	NM_007535.1			6671627	NM_007535.1	Bcl2a1c		ILMN_2678894	005820253	S	215	CCAAGTGATGGAAAAAGAGTTTGAAGATGGCATCATTAATTGGGGAAGGA							A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]			
Mus musculus	RefSeq	ILMN_238257	ILMN_238257	TPBPB	NM_026429.1	NM_026429.1		116913	13385925	NM_026429.1	Tpbpb	NP_080705.1	ILMN_2867252	004010377	S	561	ACTGGGACAAGGGCAAGCATAAAACAGCAGGGGCCTCCCCAACTCAGTAG	13	-	60911016-60911065	13qB2	Mus musculus trophoblast specific protein beta (Tpbpb), mRNA.				1600012N09Rik; MGC117631	1600012N09Rik; MGC117631
Mus musculus	RefSeq	ILMN_191546	ILMN_213192	0610007P22RIK	NM_026676.2	NM_026676.2		68327	142372926	NM_026676.2	0610007P22Rik	NP_080952.1	ILMN_2480021	006590561	S	1103	AGCAGGCCCGTCCATCCCCAGGTCCTACTGCCACTTCTGAATAATGCACA	17	+	25379683-25379732	17qA3.3	Mus musculus RIKEN cDNA 0610007P22 gene (0610007P22Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AL022759; MGC113771; 1110014B11Rik	AL022759; MGC113771; 1110014B11Rik
Mus musculus	RefSeq	ILMN_225927	ILMN_225927	4930503B20RIK	NM_029144.2	NM_029144.2		75015	126722681	NM_029144.2	4930503B20Rik	NP_083420.2	ILMN_2993567	007210523	S	873	GACGAGAAATGACGTGTTGACAGGACTTCAGCTAAAACTGGGGCCTGCTC				3qH2	Mus musculus RIKEN cDNA 4930503B20 gene (4930503B20Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700095G21Rik; 1700013A07Rik; 4930483N21Rik	1700095G21Rik; 1700013A07Rik; 4930483N21Rik
Mus musculus	MEEBO	ILMN_211812	ILMN_211812	4930553D19RIK	scl43131.3.1_32	XM_126952.3			38050415	XM_126952.3	4930553D19Rik		ILMN_1238452	003610360	S	402	AATGCCCTTTTAGTATGTGAGCAACCAAAGGAGCTTCTGATGTTTTTCAA										
Mus musculus	RefSeq	ILMN_219169	ILMN_219169	MAGIX	NM_018832.2	NM_018832.2		54634	134053861	NM_018832.2	Magix	NP_061302.2	ILMN_2705203	005890450	S	1286	CGCGCAGCTTCTCCTAGTCCCTTCCCGACCGGGAGGTAATAAAATAGTTG	X	-	7251758-7251807	XqA1.1	Mus musculus MAGI family member, X-linked (Magix), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Sfc18; Pdzx; MGC117659	Sfc18; Pdzx; MGC117659
Mus musculus	MEEBO	ILMN_222258	ILMN_222258	LRRC16	scl44198.21_82	NM_026825.1			30794441	NM_026825.1	Lrrc16		ILMN_2747022	002900451	S	3463	CTCGATAGAGCAATTTATTCTTGATGTATGCAATTGCACATTGTAATTAT										
Mus musculus	RefSeq	ILMN_220540	ILMN_220540	NUBP2	NM_011956.2	NM_011956.2		26426	31981334	NM_011956.2	Nubp2	NP_036086.1	ILMN_2723438	000540400	S	816	CGCACTCACGTCCATAGCCCAGAGAGTTGTGCACAGGATGTCTGCCCTGT	17	-	25021375-25021424	17qA3.3	Mus musculus nucleotide binding protein 2 (Nubp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D17Wsu11e	D17Wsu11e
Mus musculus	RefSeq	ILMN_220540	ILMN_220540	NUBP2	NM_011956.2	NM_011956.2		26426	31981334	NM_011956.2	Nubp2	NP_036086.1	ILMN_2925567	000160215	S	1118	AGGCTTTCGTCCAACCCTAGTCACTTCTGCCCCAGGTCAACAGGCTGCTC	17	-	25021151-25021157:25021070-25021112	17qA3.3	Mus musculus nucleotide binding protein 2 (Nubp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D17Wsu11e	D17Wsu11e
Mus musculus	RefSeq	ILMN_220540	ILMN_220540	NUBP2	NM_011956.2	NM_011956.2		26426	31981334	NM_011956.2	Nubp2	NP_036086.1	ILMN_2925570	004760487	S	966	GCAATGGCTGGACTATGCGATTACATCCATGCGGAGATCTGCAGGCCCCC	17	-	25021351-25021400	17qA3.3	Mus musculus nucleotide binding protein 2 (Nubp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D17Wsu11e	D17Wsu11e
Mus musculus	RefSeq	ILMN_200927	ILMN_200927	LOC385469	XM_358247.1	XM_358247.1			38087112	XM_358247.1	LOC385469		ILMN_2540496	004730603	S	68	GTCCCATCTGCTTTGATATGACTGAGGAGGCATACATGACCAAATGTGGC										
Mus musculus	RefSeq	ILMN_221076	ILMN_221076	TAS2R104	NM_207011.1	NM_207011.1		387340	46275827	NM_207011.1	Tas2r104	NP_996894.1	ILMN_2730744	004850474	S	803	CAGCCATGTATCCCTGTTGCCATTCCTTTATCCTAATTCTAACAAGCAGG	6	-	131634910-131634959	6qF3	Mus musculus taste receptor, type 2, member 104 (Tas2r104), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mt2r45; T2R04; mGR04; Tas2r4	mt2r45; T2R04; mGR04; Tas2r4
Mus musculus	MEEBO	ILMN_186279	ILMN_186279	AI591476	scl28991.5_454				27734161	NM_173406	AI591476		ILMN_2434172	006650092	S	18	CACGTTGCCCAAGGATATTCTATGGAGGACTCGCCAGGATGCTGAAGGTG										
Mus musculus	RefSeq	ILMN_215143	ILMN_215143	NBN	NM_013752.3	NM_013752.3		27354	145386523	NM_013752.3	Nbn	NP_038780.3	ILMN_1240392	004250092	S	2369	CCTTGTAAAGGAAGCTGTAGAAACACATTTCTACTTCAGACCAACTGAGA				4qA2	Mus musculus nibrin (Nbn), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation [goid 1832] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence ISO]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]	Interacting selectively with damaged DNA [goid 3684] [evidence IDA]	Nbs1	Nbs1
Mus musculus	RefSeq	ILMN_215143	ILMN_215143	NBN	NM_013752.3	NM_013752.3		27354	145386523	NM_013752.3	Nbn	NP_038780.3	ILMN_2656006	001690148	S	310	TAAAAGATAATTCTAAGTATGGAACCTTTGTTAATGAAGAAAAAATGCAG				4qA2	Mus musculus nibrin (Nbn), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation [goid 1832] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence ISO]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]	Interacting selectively with damaged DNA [goid 3684] [evidence IDA]	Nbs1	Nbs1
Mus musculus	RefSeq	ILMN_213631	ILMN_213631	PRCP	NM_028243.2	NM_028243.2		72461	141802793	NM_028243.2	Prcp	NP_082519.1	ILMN_2639155	001980128	S	2183	GTCCTGCTCTCTTTGTTTCCAAGGCCAATTTTATGGTGGTCTGGCTACAT	7	+	100082354-100082403	7qE1	Mus musculus prolylcarboxypeptidase (angiotensinase C) (Prcp), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	HUMPCP; PCP; 2610104A14Rik; 2510048K03Rik; AI451719	HUMPCP; PCP; 2610104A14Rik; 2510048K03Rik; AI451719
Mus musculus	RefSeq	ILMN_199071	ILMN_255235	LOC216229	XR_002536.1	XR_002536.1		216229	94389592	XR_002536.1	LOC216229		ILMN_1248762	001030131	S	1038	TGGAGAAGTGCAGTCCCCAGAAGATACAGAGGATGGATCCCCAGAGTTTA				10qC2	PREDICTED: Mus musculus similar to Histone-binding protein RBBP4 (Retinoblastoma-binding protein 4) (RBBP-4) (Retinoblastoma-binding protein p48) (Chromatin assembly factor 1 subunit C) (CAF-1 subunit C) (Chromatin assembly factor I p48 subunit) (CAF-I 48 kDa subunit) (CA... (LOC216229), mRNA.					
Mus musculus	RefSeq	ILMN_214416	ILMN_226042	SLC35D3	NM_029529.3	NM_029529.3		76157	146141177	NM_029529.3	Slc35d3	NP_083805.1	ILMN_1216110	001170523	S	2522	CTGCACACCCCAAAACTCTGTTACAAAAAGAGCCACTGCTATATTCGCAT				10qA3	Mus musculus solute carrier family 35, member D3 (Slc35d3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	Frcl1; 6230421J19Rik	Frcl1; 6230421J19Rik
Mus musculus	RefSeq	ILMN_223415	ILMN_223415	CLEC2G	NM_027562.1	NM_027562.1		70809	13386235	NM_027562.1	Clec2g	NP_081838.1	ILMN_2792036	002650241	S	1782	TCCAGGAGCCTTCTGGCCCAGGCCAGTGTAATGGTGGAGTCTATATAGAA	6	+	128949642-128949691	6qF3	Mus musculus C-type lectin domain family 2, member g (Clec2g), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IC ]	Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4632413B12Rik; Ocilrp1; MGC144756	4632413B12Rik; Ocilrp1; MGC144756
Mus musculus	RefSeq	ILMN_223415	ILMN_223415	CLEC2G	NM_027562.1	NM_027562.1		70809	13386235	NM_027562.1	Clec2g	NP_081838.1	ILMN_2763762	001710056	S	2169	ACTGAGCCTTTAAAAAAATATTGAAAATCTTATAGATTGAGCTACCATGT	6	+	128950029-128950078	6qF3	Mus musculus C-type lectin domain family 2, member g (Clec2g), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IC ]	Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4632413B12Rik; Ocilrp1; MGC144756	4632413B12Rik; Ocilrp1; MGC144756
Mus musculus	MEEBO	ILMN_191372	ILMN_191372	TXNL4	scl027366.4_62	NM_025299.1			13384655	NM_025299.1	Txnl4		ILMN_1218612	002970754	S	12	GAAATGGTTGACATCATAGAGACCGTGTACCGTGGCGCCCGCAAAGGCCG										
Mus musculus	MEEBO	ILMN_186467	ILMN_186467	IGSF3	scl22810.11_304				46402170	NM_207205	Igsf3		ILMN_1219384	004860450	S	6	CCCAGGACACTATATGACCACACCCTCTCTCATCGGTGTGTTTCTGTAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_187553	ILMN_219143	RHBDD2	NM_146002.2	NM_146002.2		215160	84872209	NM_146002.2	Rhbdd2	NP_666114.1	ILMN_2445117	000060546	S	1540	GAAACAACACAGATACAGGGACATTTATCAAAGTACTCTTCAGAGCTGGC	5	+	136119615-136119664	5qG2	Mus musculus rhomboid domain containing 2 (Rhbdd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Usmg1; 0610011L13Rik; AI480532; MGC18730; Rhbdl7	Usmg1; 0610011L13Rik; AI480532; MGC18730; Rhbdl7
Mus musculus	RefSeq	ILMN_219143	ILMN_219143	RHBDD2	NM_146002.2	NM_146002.2		215160	84872209	NM_146002.2	Rhbdd2	NP_666114.1	ILMN_2993185	005260142	S	4014	CCAGGCTGGGGTCAGAGACATGCCATGAAATATGTACTGGGGACACGGGT	5	+	136122089-136122138	5qG2	Mus musculus rhomboid domain containing 2 (Rhbdd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Usmg1; 0610011L13Rik; AI480532; MGC18730; Rhbdl7	Usmg1; 0610011L13Rik; AI480532; MGC18730; Rhbdl7
Mus musculus	RefSeq	ILMN_214707	ILMN_214707	ACBD5	NM_028793.2	NM_028793.2		74159	133892632	NM_028793.2	Acbd5	NP_083069.1	ILMN_1220016	001110164	S	2519	CTAGCCATTAAAACAGAGAGAAGATCAATTTAGATCCCGGAACACTGTAT	2	+	22969039-22969088	2qA3	Mus musculus acyl-Coenzyme A binding domain containing 5 (Acbd5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]	1300014E15Rik; MGC90942	1300014E15Rik; MGC90942
Mus musculus	RefSeq	ILMN_214707	ILMN_214707	ACBD5	NM_028793.2	NM_028793.2		74159	133892632	NM_028793.2	Acbd5	NP_083069.1	ILMN_2682307	000610139	S	220	ACAAACAGGCAACTGAAGGACCCTGTAAACTTTCACGGCCTGGATTCTGG	2	+	22931058-22931107	2qA3	Mus musculus acyl-Coenzyme A binding domain containing 5 (Acbd5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]	1300014E15Rik; MGC90942	1300014E15Rik; MGC90942
Mus musculus	Riken	ILMN_207415	ILMN_207415	IL18R1	ri|F630101C07|PL00015C04|AK089237|1920					AK089237	Il18r1		ILMN_1244895	004230113	S	159	TGGCGGAGGAGTCAGCTGAGATCCAGGCAGGAGAACTCCAGGGGCTCTAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195874	ILMN_233527	CREM	NM_013498.1	NM_013498.1		12916	7304976	NM_013498.1	Crem	NP_038526.1	ILMN_1216758	004260632	S	292	GAAGAAAAATCAGAGGAAGAAGGGACACCACCTAACATTGCTACCATGGC	18	-	3295078-3295127	18qA1	Mus musculus cAMP responsive element modulator (Crem), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ICER	ICER
Mus musculus	RefSeq	ILMN_195874	ILMN_233527	CREM	NM_013498.1	NM_013498.1		12916	7304976	NM_013498.1	Crem	NP_038526.1	ILMN_2747264	006560601	S	182	CAGAAGTAATTGATTCGCATAAACGTAGAGAAATTCTTTCACGAAGACCC	18	-	3295327-3295376	18qA1	Mus musculus cAMP responsive element modulator (Crem), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ICER	ICER
Mus musculus	RefSeq	ILMN_233527	ILMN_233527	CREM	NM_013498.1	NM_013498.1		12916	7304976	NM_013498.1	Crem	NP_038526.1	ILMN_2964986	006250373	S	2004	ATGGGGTCCAGGGGAAGAGGTTAGAGGTTAGCCTTTGTGCTGTACTAGGC	18	-	3266649-3266698	18qA1	Mus musculus cAMP responsive element modulator (Crem), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ICER	ICER
Mus musculus	RefSeq	ILMN_195874	ILMN_233527	CREM	NM_013498.1	NM_013498.1		12916	7304976	NM_013498.1	Crem	NP_038526.1	ILMN_1242622	003130719	S	2070	GGAGAGTTTCTGCTGATGACCCTCCATTGTGAATTCTTGCAACCTCAGGA	18	-	3266583-3266632	18qA1	Mus musculus cAMP responsive element modulator (Crem), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ICER	ICER
Mus musculus	RefSeq	ILMN_211204	ILMN_250058	1700030J22RIK	NM_027103.2	NM_027103.2		69528	141802465	NM_027103.2	1700030J22Rik	NP_081379.1	ILMN_1231468	004150598	S	2881	GCGCTGGCTGGGGCAGCTCGAGAAGAGTTTGTTAGAGTCCTTTTGTCCAC	8	-	119493539-119493588	8qE1	Mus musculus RIKEN cDNA 1700030J22 gene (1700030J22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_185879	ILMN_254277	RFESD	NM_178916.4	NM_178916.4		218341	144922685	NM_178916.4	Rfesd	NP_849247.2	ILMN_1246045	005390215	S	1197	GCTATGGACATTCGCTGTTACCATTCTGGAGGGCCCTTACACTTGGGAGA	13	-	76145437-76145465:76145559-76145579	13qC1	Mus musculus Rieske (Fe-S) domain containing (Rfesd), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AI256775; D030068K09	AI256775; D030068K09
Mus musculus	RefSeq	ILMN_260920	ILMN_260920	5730494M16RIK	NM_001004361.1	NM_001004361.1		66648	52345391	NM_001004361.1	5730494M16Rik	NP_001004361.1	ILMN_3163221	000650082	A	1135	CTGTACCCAATCCTTAACTTCTTAGCAGTAATTAGAGAGGTCACCCTCCC	18	-	25297123-25297172	18qA2	Mus musculus RIKEN cDNA 5730494M16 gene (5730494M16Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730437P09Rik; MGC91164; AI666318	5730437P09Rik; MGC91164; AI666318
Mus musculus	RefSeq	ILMN_230572	ILMN_230572	EG432825	NM_001024706.1	NM_001024706.1		432825	67010058	NM_001024706.1	EG432825	NP_001019877.1	ILMN_3079301	006620411	I	496	ATCAAGCAGAAAAGAGGTTCTGTGAGGAGGCCAGCAAGAACATGTGTGTC	14	-	20418788-20418831:20418944-20418949	14qA3	Mus musculus predicted gene, EG432825 (EG432825), mRNA.					
Mus musculus	RefSeq	ILMN_230572	ILMN_230572	EG432825	NM_001024706.1	NM_001024706.1		432825	67010058	NM_001024706.1	EG432825	NP_001019877.1	ILMN_3158532	000770440	A	200	GGTCTGCTAGAAATACTTCAACCCAAAATTCCAACATCACTAATCAGATA	14	-	20420828-20420877	14qA3	Mus musculus predicted gene, EG432825 (EG432825), mRNA.					
Mus musculus	Riken	ILMN_207319	ILMN_207319	4921539B16RIK	ri|4921539B16|PX00639E19|AK076625|1728					AK076625	4921539B16Rik		ILMN_1226721	002850689	S	1608	TGCACAGTGTAGACAGACAAGTGTCTAGGAACAACAGCTAAGCCATGCTG										
Mus musculus	Riken	ILMN_205196	ILMN_205196	D030026M07RIK	ri|D030026M07|PX00179H10|AK050861|2049					AK050861	D030026M07Rik		ILMN_2570721	006040167	S	1929	ATGTGAGGCCGGTCCCAACTGCCTGTAAGTCCAGCTCCAAGGGGTCTACA										
Mus musculus	RefSeq	ILMN_218275	ILMN_218275	CLCN1	NM_013491.1	NM_013491.1		12723	29789047	NM_013491.1	Clcn1	NP_038519.1	ILMN_2802672	001740324	S	3105	GGGCCCATGTCAGAGAGTGGACGTGTATGTGATATGGAGAGGCCTCCACT	6	+	42243823-42243872	6qB2.1	Mus musculus chloride channel 1 (Clcn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IMP]; A neurological process that causes the sequential depolarization of a neuron's cell membrane along an axon [goid 19227] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]	nmf355; adr; Clc-1; mto; Clc1; myotonia; MGC124486; SMCC1	nmf355; adr; Clc-1; mto; Clc1; myotonia; MGC124486; SMCC1
Mus musculus	RefSeq	ILMN_218156	ILMN_218156	EAPA2	NM_203396.1	NM_203396.1		403088	42794266	NM_203396.1	Eapa2	NP_981933.1	ILMN_2692367	007510309	S	2887	CAACCGAAAAGCCCTAATGATTCAAGATTCAATTTTAGGGACCACCCCCG	6	-	42537385-42537434	6qB2.1	Mus musculus experimental autoimmune prostatitis antigen 2 (Eapa2), mRNA.					
Mus musculus	RefSeq	ILMN_191627	ILMN_242417	WDR37	NM_001039389.1	NM_001039389.1		207615	86476060	NM_001039389.1	Wdr37	NP_001034478.1	ILMN_1235689	001070594	S	361	CTGCCGTCCTCAGTTCGCAGTACACTGCTGGAATTGTTTGGCCAGATAGA	13	-	8856115-8856164	13qA1	Mus musculus WD repeat domain 37 (Wdr37), transcript variant 3, mRNA.				4933417A01Rik; mKIAA0982; AI481191; 3110035P10Rik; 6430603N07	4933417A01Rik; mKIAA0982; AI481191; 3110035P10Rik; 6430603N07
Mus musculus	RefSeq	ILMN_190170	ILMN_240483	UAP1L1	NM_001033293.2	NM_001033293.2		227620	142383016	NM_001033293.2	Uap1l1	NP_001028465.1	ILMN_2467800	001410113	S	1632	TGAAGCAAGTGTGCTAGTTGCTCTGAAAGATTGGGACCTCTTGGATCCCC	2	-	25217020-25217069	2qA3	Mus musculus UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 (Uap1l1), mRNA. XM_918982		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	5730445F03Rik	5730445F03Rik
Mus musculus	MEEBO	ILMN_213126	ILMN_213126	1110018H23RIK	scl50993.2.1_3	XM_128459.2			38082084	XM_128459.2	1110018H23Rik		ILMN_2633926	000630064	S	1230	AGGTTAGTAGCCACCGGCTCCCGCTTCAGAGAGGGCTATGAGATCCCTCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222057	ILMN_261880	GPR165	NM_029536.2	NM_029536.2		76206	142388875	NM_029536.2	Gpr165	NP_083812.1	ILMN_2743974	001980746	S	960	TTGGAAAGATGACATGTCACCTCAGTCGCTTTGCCCAGTACTCATGTGCC	X	+	93910442-93910491	XqC3	Mus musculus G protein-coupled receptor 165 (Gpr165), mRNA. XM_981895 XM_981931 XM_981971 XM_982599			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	6530406P05Rik	6530406P05Rik
Mus musculus	Riken	ILMN_203368	ILMN_203368	9330171D12RIK	ri|9330171D12|PX00106K14|AK034275|1775					AK034275	9330171D12Rik		ILMN_2556771	003130634	S	1606	CTGCCCATGAACTCAACTGTCTTTCTTGGCAGAGGTGACAGCCTCCAGGC										
Mus musculus	RefSeq	ILMN_201245	ILMN_255687	C85627	NM_001033794.1	NM_001033794.1		546161	85702118	NM_001033794.1	C85627	NP_001028966.1	ILMN_1220842	002490079	S	1306	GCAACTCAGTAAGTGTTATCGGCTGCAAAACAGAAGACGGCTTCCACGGC	9	-	109590847-109590896	9qF2	Mus musculus expressed sequence C85627 (C85627), mRNA.					
Mus musculus	RefSeq	ILMN_212865	ILMN_257579	OLFR358	NM_207235.1	NM_207235.1		227789	46402224	NM_207235.1	Olfr358	NP_997118.1	ILMN_2631135	000460433	S	795	TGACTTAAACCAGGATCGACAGATTGCCATCTTCTACACATTGGTCACCC	2	-	36860288-36860337	2qB	Mus musculus olfactory receptor 358 (Olfr358), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	GA_x6K02T2NLDC-33697309-33696317; MOR159-4	GA_x6K02T2NLDC-33697309-33696317; MOR159-4
Mus musculus	RefSeq	ILMN_198746	ILMN_198746	LOC245511	XM_141919.2	XM_141919.2			28528775	XM_141919.2	LOC245511		ILMN_1254311	006380309	S	2045	CTATTTGTAATGTGATTCCAGTAGGGTCTTCAGGGGACAAAACAAGATGC										
Mus musculus	RefSeq	ILMN_192364	ILMN_233866	PRRT3	NM_172487.3	NM_172487.3		210673	118130011	NM_172487.3	Prrt3	NP_766075.2	ILMN_2487421	003400156	S	2638	TTGGTTCGAGAGAGTGTGTTCCAACGCTGTGGTCTCCGTGGCTTGGCCTC	6	-	113444705-113444754	6qE3	Mus musculus proline-rich transmembrane protein 3 (Prrt3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			B230206N24Rik; 6330505P20	B230206N24Rik; 6330505P20
Mus musculus	RefSeq	ILMN_233866	ILMN_233866	PRRT3	NM_172487.3	NM_172487.3		210673	118130011	NM_172487.3	Prrt3	NP_766075.2	ILMN_2902767	001090477	S	3174	TGAGCATTTGAAAAATTGGCCCTCCCGGGCCTCCACCAGACTGCAGCTCC	6	-	113444169-113444218	6qE3	Mus musculus proline-rich transmembrane protein 3 (Prrt3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			B230206N24Rik; 6330505P20	B230206N24Rik; 6330505P20
Mus musculus	RefSeq	ILMN_223581	ILMN_223581	OTTMUSG00000015529	NM_177848.3	NM_177848.3		329514	142377485	NM_177848.3	OTTMUSG00000015529	NP_808516.1	ILMN_1238850	002940273	S	2149	TAATGTTTTATATTGTGATATAAATATTAACATAACATCTTGGGGATAAA	2	+	129201208-129201257	2qF1	Mus musculus predicted gene, OTTMUSG00000015529 (OTTMUSG00000015529), mRNA.				MGC132797; 9430083I22; MGC132798	MGC132797; 9430083I22; MGC132798
Mus musculus	RefSeq	ILMN_253583	ILMN_253583	CXCL10	NM_021274.1	NM_021274.1		15945	10946575	NM_021274.1	Cxcl10	NP_067249.1	ILMN_3142803	003140209	A	177	GGAAGCTTGAAATCATCCCTGCGAGCCTATCCTGCCCACGTGTTGAGATC	5	-	92777116-92777165	5qE2	Mus musculus chemokine (C-X-C motif) ligand 10 (Cxcl10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	Scyb10; IP10; mob-1; INP10; CRG-2; gIP-10; C7; IP-10; Ifi10	Scyb10; IP10; mob-1; INP10; CRG-2; gIP-10; C7; IP-10; Ifi10
Mus musculus	Riken	ILMN_205074	ILMN_205074	D330028K02RIK	ri|D330028K02|PX00192L16|AK052326|3983					AK052326	D330028K02Rik		ILMN_1229106	005690014	S	3173	GTGTCCTTGCTGAAGCTTGATGTGTGCACGTACCGTCCTAACGGACTGCC										
Mus musculus	RefSeq	ILMN_214214	ILMN_214214	DRG1	NM_007879.1	NM_007879.1		13494	6681224	NM_007879.1	Drg1	NP_031905.1	ILMN_1252761	000620431	S	329	GCAGGAGTGTATTCTGAAGTGGCAGCCTATGAATTCACTACATTGACCAC	11	-	3162531-3162580	11qA1	Mus musculus developmentally regulated GTP binding protein 1 (Drg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Nedd3; AI132520; AA408859	Nedd3; AI132520; AA408859
Mus musculus	RefSeq	ILMN_214214	ILMN_214214	DRG1	NM_007879.1	NM_007879.1		13494	6681224	NM_007879.1	Drg1	NP_031905.1	ILMN_1238919	003710068	S	868	GCCTCACTGTGTACCCATCTCTGCTCATCACCGCTGGAATTTTGATGACC	11	-	3152686-3152735	11qA1	Mus musculus developmentally regulated GTP binding protein 1 (Drg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Nedd3; AI132520; AA408859	Nedd3; AI132520; AA408859
Mus musculus	RefSeq	ILMN_214214	ILMN_214214	DRG1	NM_007879.1	NM_007879.1		13494	6681224	NM_007879.1	Drg1	NP_031905.1	ILMN_2950302	001050242	S	1114	TCCTCAGAAAGTGGGTAAAGACCACACATTGGAAGATGAAGACGTCATTC	11	-	3150285-3150334	11qA1	Mus musculus developmentally regulated GTP binding protein 1 (Drg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Nedd3; AI132520; AA408859	Nedd3; AI132520; AA408859
Mus musculus	RefSeq	ILMN_215289	ILMN_314158	4933406J08RIK	XM_001480682.1	XM_001480682.1		74401	149249699	XM_001480682.1	4933406J08Rik	XP_001480732.1	ILMN_2657671	005220369	S	1488	AGGCCAGTTACAAAGCCTCTATACAGCGTGTAGAAGGTCCTGTGTTCAAG				2qE5	PREDICTED: Mus musculus RIKEN cDNA 4933406J08 gene (4933406J08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201476	ILMN_201476	LOC385234	XM_358133.1	XM_358133.1			38094062	XM_358133.1	LOC385234		ILMN_1253820	007510725	S	161	CTGGGTGTAAAGGTCATGGCAAGGAAGGCTGTCCATCTAGCCTGGTGGCC										
Mus musculus	MEEBO	ILMN_186037	ILMN_186037	4833420G11RIK	scl4624.1.1_234						4833420G11Rik		ILMN_2432075	006200307	S	20	ACTGCTTGCTTATCCATGGTCTGTTAGTGCCTAGAAACCCCCTCCAAGGA										
Mus musculus	Riken	ILMN_204111	ILMN_204111	A830005C06RIK	ri|A830005C06|PX00153N11|AK043522|1821					AK043522	A830005C06Rik		ILMN_1239579	002940598	S	1692	AGATCCATTTGGGGAAATTGTAAGTTGAAACGACAGGGCACACCTGGGCC										
Mus musculus	RefSeq	ILMN_258007	ILMN_258007	OLFR1434	NM_207626.1	NM_207626.1		404338	46518541	NM_207626.1	Olfr1434	NP_997509.1	ILMN_2944076	000290747	S	665	TCGCCTCGTCCATCATGAAGATCACTTCAGCAAATGGTAGGTCCAAGGCC					Mus musculus olfactory receptor 1434 (Olfr1434), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR214-4	MOR214-4
Mus musculus	RefSeq	ILMN_217134	ILMN_217134	MCM10	NM_027290.2	NM_027290.2		70024	142369377	NM_027290.2	Mcm10	NP_081566.1	ILMN_2679464	000650121	S	2886	TGGTGCCTACCCGCTTTCCTCCATGTGCTGGCCTGACACCATATTTGACA	2	-	4912272-4912321	2qA1	Mus musculus minichromosome maintenance deficient 10 (S. cerevisiae) (Mcm10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C79164; AU018508; C330019M07Rik; 2410041F14Rik	C79164; AU018508; C330019M07Rik; 2410041F14Rik
Mus musculus	RefSeq	ILMN_197842	ILMN_197842	LOC332942	XM_289292.2	XM_289292.2			38078836	XM_289292.2	LOC332942		ILMN_2529556	001300767	S	1313	CAGAGCTGGATGTAGGTGACTGGCTGATTTTCCCTGACATGGGTGCCTAC										
Mus musculus	RefSeq	ILMN_217352	ILMN_217352	SLC2A9	NM_145559.1	NM_145559.1		117591	21704101	NM_145559.1	Slc2a9	NP_663534.1	ILMN_2682223	003290605	S	3135	CCAGGGCCAGTGACCATGAGGCCGGAGGCCAGCAATTATTATTGTTATGT	5	-	38740603-38740652	5qB3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 9 (Slc2a9), transcript variant b, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IDA]	Glut9	Glut9
Mus musculus	RefSeq	ILMN_211127	ILMN_211127	ANAPC10	NM_026904.2	NM_026904.2		68999	118130278	NM_026904.2	Anapc10	NP_081180.1	ILMN_1250542	006280253	S	1262	GGCAGAGACCTGTCACCTGAGACATACTTAATGTGCTGAAGCAAAGCATG	8	+	82299680-82299729	8qC2	Mus musculus anaphase promoting complex subunit 10 (Anapc10), mRNA.	A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1500026N15Rik; A830003M23Rik; APC10	1500026N15Rik; A830003M23Rik; APC10
Mus musculus	RefSeq	ILMN_211127	ILMN_211127	ANAPC10	NM_026904.2	NM_026904.2		68999	118130278	NM_026904.2	Anapc10	NP_081180.1	ILMN_2740930	005360386	S	2644	TGAACATTGTGTCCTTAGATAGCCAGTTTCTGCTCAGTGGCCACCTGGCC	8	+	82301062-82301111	8qC2	Mus musculus anaphase promoting complex subunit 10 (Anapc10), mRNA.	A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1500026N15Rik; A830003M23Rik; APC10	1500026N15Rik; A830003M23Rik; APC10
Mus musculus	RefSeq	ILMN_218482	ILMN_218482	GABRB2	NM_008070.3	NM_008070.3		14401	124301234	NM_008070.3	Gabrb2	NP_032096.1	ILMN_2696413	005890092	S	3608	TAGGGTCCCCAGTTAAGTGTATAGGGGTCAAGGCTGGTTTTATTCTGCAG	11	+	42442149-42442198	11qA5	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 (Gabrb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C030021G16Rik; Gabrb-2; C030002O17Rik; Gabrab2; AI834970	C030021G16Rik; Gabrb-2; C030002O17Rik; Gabrab2; AI834970
Mus musculus	RefSeq	ILMN_210250	ILMN_218482	GABRB2	NM_008070.3	NM_008070.3		14401	124301234	NM_008070.3	Gabrb2	NP_032096.1	ILMN_1247588	004220327	S	7347	GGACTTCTAAAAATCTCTGGGATACATGCGGTAGTAAAATTCAAAAGAGG	11	+	42445888-42445937	11qA5	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 (Gabrb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C030021G16Rik; Gabrb-2; C030002O17Rik; Gabrab2; AI834970	C030021G16Rik; Gabrb-2; C030002O17Rik; Gabrab2; AI834970
Mus musculus	RefSeq	ILMN_231170	ILMN_231170	GBA	NM_001077411.1	NM_001077411.1		14466	116734814	NM_001077411.1	Gba	NP_001070879.1	ILMN_3130172	007100722	A	1713	TCGCCAGTGATGGAACTGACACCTGAGCAGGCACCTGGGCTTAGCATGGA	3	+	89012535-89012544:89012545-89012584	3qF1	Mus musculus glucosidase, beta, acid (Gba), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine [goid 4348] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GC; GBA1; GLUC; GCase	GC; GBA1; GLUC; GCase
Mus musculus	RefSeq	ILMN_200089	ILMN_200089	LOC381649	XM_355612.1	XM_355612.1			38080300	XM_355612.1	LOC381649		ILMN_1241536	000050762	S	56	CACCGTGTTCTTTGACATCACTGCTGATGATGACGAGCCCTTGGGCCTCG										
Mus musculus	MEEBO	ILMN_186583	ILMN_186583	SPN	scl30656.3_651				49274635	NM_009259	Spn		ILMN_2715730	003170400	S	2339	GACCCCGCCAGCCCAGGCACGTGGTCCAAAGGTGGTTGCATGGAGGAGAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan [goid 1562] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence ISO]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism [goid 50688] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response [goid 1808] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell activation [goid 50868] [evidence IMP]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any part of a bacterial cell [goid 8367] [evidence ISO]; Interacting selectively with any part of a bacterial cell [goid 8367] [evidence IMP]		
Mus musculus	RefSeq	ILMN_220127	ILMN_220127	SERPINA5	NM_172953.2	NM_172953.2		268591	142385329	NM_172953.2	Serpina5	NP_766541.1	ILMN_1238098	001980093	S	1439	CCATCCATCTCTTGGTTGCTAGTGATTTTCATAGAGTAGATTGACTAGTA	12	+	105343624-105343673	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 5 (Serpina5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	4933415L04; Pci; PAI-3	4933415L04; Pci; PAI-3
Mus musculus	RefSeq	ILMN_222890	ILMN_235808	5330439C02RIK	XM_903022.2	XM_903022.2		217143	94390858	XM_903022.2	5330439C02Rik	XP_908115.1	ILMN_2756275	006380681	S	1066	GGCAGAGGTGCAAGGGCGGGCTTTGGTAAAGCAAGGCTAATGTACAACCT	11	-	97165631-97165680	11qD	PREDICTED: Mus musculus RIKEN cDNA 5330439C02 gene, transcript variant 3 (5330439C02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_184722	ILMN_320562	MACF1	XM_001476175.1	XM_001476175.1		11426	149252990	XM_001476175.1	Macf1	XP_001476225.1	ILMN_1251266	005690685	S	15933	TGACAAACCCTGGTTGATAAACAGTAAAGCTGTCAAGGACAGCCATTGTC				4qD2.2	PREDICTED: Mus musculus microtubule-actin crosslinking factor 1 (Macf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane [goid 6620] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198778	ILMN_316777	GPR123	NM_177469.3	NM_177469.3		52389	144446129	NM_177469.3	Gpr123	NP_803420.2	ILMN_1229727	004480487	S	314	GCAGGAGACCTGTGCCTCTTCGGCTGCCTTTACCAAAATAGGTGGGTCAG	7	+	147020386-147020426:147021102-147021110	7qF4	Mus musculus G protein-coupled receptor 123 (Gpr123), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	D7Ertd680e; 2900059M17Rik	D7Ertd680e; 2900059M17Rik
Mus musculus	RefSeq	ILMN_215330	ILMN_316777	GPR123	NM_177469.3	NM_177469.3		52389	144446129	NM_177469.3	Gpr123	NP_803420.2	ILMN_2658198	004220246	S	4407	GACCACCAGGCTGTTTCAGCTCCTTTCACTAACGGACTTTTTTACCTGCT	7	+	147063636-147063685	7qF4	Mus musculus G protein-coupled receptor 123 (Gpr123), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	D7Ertd680e; 2900059M17Rik	D7Ertd680e; 2900059M17Rik
Mus musculus	RefSeq	ILMN_216346	ILMN_216346	OLFR374	NM_146338.1	NM_146338.1		258335	22129620	NM_146338.1	Olfr374	NP_666450.1	ILMN_2670007	004040544	S	582	CAATGACATCATGGTATACACTGTGGGCGCATTGCCCATCATCACCCCCT	8	+	74634048-74634097	8qB3.3	Mus musculus olfactory receptor 374 (Olfr374), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR130-1	MOR130-1
Mus musculus	RefSeq	ILMN_188309	ILMN_188309	TRMU	NM_028063.2	NM_028063.2		72026	118130414	NM_028063.2	Trmu	NP_082339.1	ILMN_2451578	005270445	S	1090	ATCAGGATGGCACTGTGTGGGTAACGGCTGTGAAGGCTGTGAGGGGCCTT	15	+	85727286-85727335	15qE2	Mus musculus tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase (Trmu), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylaminomethyl-2-thiouridylate [goid 4808] [evidence IEA]	Trmt1; 1600025P05Rik; 1110005N20Rik; AI314320	Trmt1; 1600025P05Rik; 1110005N20Rik; AI314320
Mus musculus	RefSeq	ILMN_188309	ILMN_188309	TRMU	NM_028063.2	NM_028063.2		72026	118130414	NM_028063.2	Trmu	NP_082339.1	ILMN_1255485	001660494	S	311	CGAGTATGAGAAAGGAAGGACTCCAAACCCCGACATCAACTGCAATAAGC	15	+	85715528-85715577	15qE2	Mus musculus tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase (Trmu), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylaminomethyl-2-thiouridylate [goid 4808] [evidence IEA]	Trmt1; 1600025P05Rik; 1110005N20Rik; AI314320	Trmt1; 1600025P05Rik; 1110005N20Rik; AI314320
Mus musculus	RefSeq	ILMN_214766	ILMN_214766	OLFR1494	NM_146990.1	NM_146990.1		258992	22128952	NM_146990.1	Olfr1494	NP_667201.1	ILMN_2651687	004670603	S	858	CACGCCATTACTCAATCCTCTGATTTACACCCTTCGGAATAAAGATGTGA	19	+	13824455-13824504	19qA	Mus musculus olfactory receptor 1494 (Olfr1494), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC123672; MGC123731; MOR266-1; MGC123732	MGC123672; MGC123731; MOR266-1; MGC123732
Mus musculus	RefSeq	ILMN_219229	ILMN_219229	BC043934	NM_177770.3	NM_177770.3		270185	142351520	NM_177770.3	BC043934	NP_808438.1	ILMN_1253937	006590424	S	1987	CTCAATAGTAAAACACATATCTAGCAACACGGGTTTAAGGCCCAGAGCTG	9	-	96336521-96336570	9qE3.3	Mus musculus cDNA sequence BC043934 (BC043934), mRNA.				MGC31404; MGC49691; D030022H06	MGC31404; MGC49691; D030022H06
Mus musculus	RefSeq	ILMN_186905	ILMN_186905	TMPRSS3	NM_080727.1	NM_080727.1		140765	18141558	NM_080727.1	Tmprss3	NP_542765.1	ILMN_1243162	005050328	S	2501	CACACATAGCCATTGTACTTTGACTCAACCCTATCCAGATTAGAGCCCCC	17	-	31316397-31316446	17qA3.3	Mus musculus transmembrane protease, serine 3 (Tmprss3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISO]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The regulation of the levels, transport, and metabolism of sodium ions within a cell or between a cell and its external environment [goid 6883] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA];  [goid 17080] [evidence ISO]	MGC130589	MGC130589
Mus musculus	RefSeq	ILMN_223647	ILMN_223647	3110082I17RIK	NM_028469.3	NM_028469.3		73212	146134370	NM_028469.3	3110082I17Rik	NP_082745.2	ILMN_2767057	001240706	S	988	GGTGGGGGACTCCTACATATTCGATCTGGGTGCCATTGCAGTGCAGCCTG				5qG2	Mus musculus RIKEN cDNA 3110082I17 gene (3110082I17Rik), mRNA.				AW411904	AW411904
Mus musculus	RefSeq	ILMN_197251	ILMN_257272	KBTBD10	NM_001081087.1	NM_001081087.1		228003	124487328	NM_001081087.1	Kbtbd10	NP_001074556.1	ILMN_2527465	007570747	S	1808	ATGGGCTGGGATGCTGAAGGAAATCCGTTACGCTTCGGGAGCTAGTTGCC	2	+	69521566-69521615	2qC2	Mus musculus kelch repeat and BTB (POZ) domain containing 10 (Kbtbd10), mRNA.				SARCOSIN; Gm112	SARCOSIN; Gm112
Mus musculus	RefSeq	ILMN_201349	ILMN_322626	LOC100045176	XM_001473795.1	XM_001473795.1		100045176	149262035	XM_001473795.1	LOC100045176	XP_001473845.1	ILMN_1241625	003390609	S	290	AGACTCTGGAAGCAGTGAAGGGGAAACAGATTGGGGAGTATGGAGCTGCT					PREDICTED: Mus musculus similar to mitchondrial ribosomal protein S7 (LOC100045176), mRNA.					
Mus musculus	RefSeq	ILMN_218374	ILMN_218374	SAP30	NM_021788.1	NM_021788.1		60406	12408289	NM_021788.1	Sap30	NP_068560.1	ILMN_2694917	007200240	S	947	GGCCGACAGTGGTGTTCACTAGGAGAGATGCTGTTCACACTAGCCCATAG	8	-	59961682-59961724:59961725-59961731	8qB2	Mus musculus sin3 associated polypeptide (Sap30), mRNA.	A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins [goid 16580] [evidence ISA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	30kDa	30kDa
Mus musculus	RefSeq	ILMN_220077	ILMN_220077	GJA10	NM_010289.2	NM_010289.2		14610	117168288	NM_010289.2	Gja10	NP_034419.2	ILMN_2717340	006550255	S	1273	CCAGGAAGTCGCAAGGCCAGCTTTCTATCGAGGCTGATGTCAGAAAAGGG	4	-	32688035-32688084	4qA5	Mus musculus gap junction protein, alpha 10 (Gja10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]	The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IDA]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence IMP]; The series of events involved in visual perception in which a sensory light stimulus is received by a cell and converted into a molecular signal [goid 50908] [evidence IMP]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	A wide pore channel activity that enables a direct cytoplasmic connection from one cell to an adjacent cell. The gap junction can pass large solutes as well as electrical signals between cells. Gap junctions consist of two gap junction hemi-channels, or connexons, one contributed by each membrane through which the gap junction passes [goid 5243] [evidence IDA]	Cx-57; Cx59	Cx-57; Cx59
Mus musculus	RefSeq	ILMN_191989	ILMN_225706	EARS2	NM_026140.2	NM_026140.2		67417	29568091	NM_026140.2	Ears2	NP_080416.1	ILMN_2741790	006330703	S	1663	GCAGGAAACCTGGAGCCTATTGGGACCCTTTCAGGATGAACAGCTGTAGA	7	-	129182468-129182517	7qF3	Mus musculus glutamyl-tRNA synthetase 2 (mitochondrial)(putative) (Ears2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling glutamate to glutamyl-tRNA, catalyzed by glutamyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'- adenosine residue of the tRNA [goid 6424] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu) [goid 4818] [evidence IEA]	mKIAA1970; 3230401I01Rik; AL024049	mKIAA1970; 3230401I01Rik; AL024049
Mus musculus	RefSeq	ILMN_222159	ILMN_222159	OLFML2B	NM_177068.3	NM_177068.3		320078	31982213	NM_177068.3	Olfml2b	NP_796042.2	ILMN_2745551	002030142	S	2574	GCAAATGAACTTCTCCTTCTGACCAGTAACTACCTTCTTTCGTGCTCTGA	1	+	172612702-172612751	1qH3	Mus musculus olfactomedin-like 2B (Olfml2b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]		Interacting selectively with a component of the extracellular matrix [goid 50840] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	1110018N05Rik; AI467542; 4832415H08Rik	1110018N05Rik; AI467542; 4832415H08Rik
Mus musculus	Riken	ILMN_202394	ILMN_202394	4930564O18RIK	ri|4930564O18|PX00035F14|AK016223|1274					AK016223	4930564O18Rik		ILMN_1258852	003800382	S	946	TCAGGCTAGCTCCCAGCAGGTGAAGTGACTGAGGACAAGGAACCCTGGTT										
Mus musculus	MEEBO	ILMN_196060	ILMN_196060	C030014I23RIK	scl37034.2.1_141						C030014I23Rik		ILMN_1258455	005670750	S	7	GACACAGGTTGCTACTGTTCTTTGTGAAGCAGTCAGCGCTCGCTCGGCAC										
Mus musculus	Riken	ILMN_207366	ILMN_207366	C130071N01RIK	ri|C130071N01|PX00666J13|AK081722|2754					AK081722	C130071N01Rik		ILMN_2587068	006860184	S	2380	GGTTTGTCAAGGTAAGGTTTCTCTGTGCAGCCTGGCTGGCCTGGAACTCA										
Mus musculus	RefSeq	ILMN_219116	ILMN_219116	LARP5	NM_172585.2	NM_172585.2		217980	71061463	NM_172585.2	Larp5	NP_766173.1	ILMN_2704474	004860670	S	2263	CCAGTTATGCAGAGATTTGTCAGAGAACGAGTAAAGACCCTTCTTCCTCC	13	+	9169911-9169960	13qA1	Mus musculus La ribonucleoprotein domain family, member 5 (Larp5), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC78318; D13Wsu64e; AI256361; A630096F19	MGC78318; D13Wsu64e; AI256361; A630096F19
Mus musculus	RefSeq	ILMN_219116	ILMN_219116	LARP5	NM_172585.2	NM_172585.2		217980	71061463	NM_172585.2	Larp5	NP_766173.1	ILMN_2756286	005550315	S	2639	CTGTGGGGCCCGTGGGATACCTGCAAGTTACTTCCTTCTGTGAGTCGGAT	13	+	9170287-9170336	13qA1	Mus musculus La ribonucleoprotein domain family, member 5 (Larp5), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC78318; D13Wsu64e; AI256361; A630096F19	MGC78318; D13Wsu64e; AI256361; A630096F19
Mus musculus	RefSeq	ILMN_197563	ILMN_197563	LOC381453	XM_355405.1	XM_355405.1			38076575	XM_355405.1	LOC381453		ILMN_1258390	006060435	S	3	ATTTGCCTGCGATGCGCGGCGAGAGGACTGCGGCGGCTGATTTACACAGT										
Mus musculus	RefSeq	ILMN_196738	ILMN_196738	IFNA12	NM_177361.2	NM_177361.2		242519	31340762	NM_177361.2	Ifna12	NP_796335.1	ILMN_1236929	003890278	S	728	GTGCATGATTTGAAAGAAGTTGCCTTGATGTTTCAACAGTAATTAGCAAT	4	-	88248503-88248552	4qC4	Mus musculus interferon alpha 12 (Ifna12), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	MGC129420; MGC129421	MGC129420; MGC129421
Mus musculus	RefSeq	ILMN_189983	ILMN_189983	ZDHHC13	NM_028031.3	NM_028031.3		243983	146141157	NM_028031.3	Zdhhc13	NP_082307.1	ILMN_1255849	004890220	S	2091	TCTTCAGCAAGAGTGGACCTTCCGTCAGACCCAGAAAGATGGCCTGTTAC				7qB4	Mus musculus zinc finger, DHHC domain containing 13 (Zdhhc13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Hip14l; C530010M18; HIP3RP; 2410004E01Rik	Hip14l; C530010M18; HIP3RP; 2410004E01Rik
Mus musculus	RefSeq	ILMN_219335	ILMN_219335	DCTD	NM_178788.3	NM_178788.3		320685	142368337	NM_178788.3	Dctd	NP_848903.1	ILMN_1241225	003190048	S	1747	AGAGGGCTGTGGGAAACTGTGTACCTGGAGGTGGTCCATGCCAGATCCTC	8	+	49226709-49226758	8qB1.2	Mus musculus dCMP deaminase (Dctd), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: dCMP + H2O = dUMP + NH3 [goid 4132] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	6030466N05Rik	6030466N05Rik
Mus musculus	RefSeq	ILMN_190087	ILMN_190087	VIP	NM_011702.1	NM_011702.1		22353	30794515	NM_011702.1	Vip	NP_035832.1	ILMN_2943387	000510468	S	1395	CTCCCATAGTCACTCACAATGATATTTTGTCTTATTGGCTTCCTTTGCTG	10	-	4699009-4699058	10qA1	Mus musculus vasoactive intestinal polypeptide (Vip), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC107202	MGC107202
Mus musculus	RefSeq	ILMN_207454	ILMN_207454	PROM2	NM_138750.1	NM_138750.1		192212	20270282	NM_138750.1	Prom2	NP_620089.1	ILMN_1260510	007160181	I	20	AACCTGTCGGGCCGGTTTGTAGAGCCACAGGGACGGAGGGAAGAAGGCTA	2	-	127367134-127367183	2qF1	Mus musculus prominin 2 (Prom2), transcript variant 1, mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]			AI507243; MGC31164; Prom-rp	AI507243; MGC31164; Prom-rp
Mus musculus	RefSeq	ILMN_207454	ILMN_207454	PROM2	NM_138750.1	NM_138750.1		192212	20270282	NM_138750.1	Prom2	NP_620089.1	ILMN_3091416	006650670	A	2661	ACCGGGCAAGGTGATTCCTGGGGGCTTCCTGTCCTTTGTCCTTGTCTCAG	2	-	127354294-127354340:127354482-127354484	2qF1	Mus musculus prominin 2 (Prom2), transcript variant 1, mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]			AI507243; MGC31164; Prom-rp	AI507243; MGC31164; Prom-rp
Mus musculus	RefSeq	ILMN_196370	ILMN_318571	LOC100046568	XM_001473240.1	XM_001473240.1		100046568	149274842	XM_001473240.1	LOC100046568	XP_001473290.1	ILMN_1258903	006770279	S	2923	GTTGAGTTTTGTATTGCTTGCATGGACATTTTGTGCTTGTAGATTTCCCC					PREDICTED: Mus musculus hypothetical protein LOC100046568 (LOC100046568), mRNA.					
Mus musculus	RefSeq	ILMN_221367	ILMN_221367	STIM1	NM_009287.4	NM_009287.4		20866	145966856	NM_009287.4	Stim1	NP_033313.2	ILMN_2734646	004570630	S	3161	GGTTTGTTCTATGGAAGTGTGGTAGACTGGAGGGAACCTCATCCTGGAGC				7qE3	Mus musculus stromal interaction molecule 1 (Stim1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SIM	SIM
Mus musculus	RefSeq	ILMN_220064	ILMN_220064	AQP12	NM_177587.1	NM_177587.1		208760	29243943	NM_177587.1	Aqp12	NP_808255.1	ILMN_2871767	006960097	S	879	CCATCAGGGCCACCTTCCCCGCCTTTTCCAGAGAAATCTGTTCTACCGGC	1	+	94908637-94908686	1qD	Mus musculus aquaporin 12 (Aqp12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC130119; mAQP12; MGC130120; AB084104	MGC130119; mAQP12; MGC130120; AB084104
Mus musculus	RefSeq	ILMN_199651	ILMN_199651	LOC382846	XM_356707.1	XM_356707.1			38075576	XM_356707.1	LOC382846		ILMN_1218479	001260521	S	50	GGGGTAAAAGCCAAAGCACTTCAGTCATCCCAACCACACCAGGACAGAGC										
Mus musculus	Riken	ILMN_201826	ILMN_201826	PDE4B	ri|2610306O03|ZX00062K09|AK011999|779					AK011999	Pde4b		ILMN_2544890	000870195	S	606	AGGGCATTTGGGGGTTTATAACACGTCCTTTGTGATGCTGACATGGTCTG							A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]	Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence ISS]		
Mus musculus	RefSeq	ILMN_199605	ILMN_199605	LOC382776	XM_356672.1	XM_356672.1			38074973	XM_356672.1	LOC382776		ILMN_1247698	000620270	S	297	GACAGGCTGGGTGATGCTTGGAGAGACTCTAAGCCTGGGACCATCCAAGG										
Mus musculus	RefSeq	ILMN_200856	ILMN_247655	KLK13	NM_001039042.2	NM_001039042.2		626834	110681721	NM_001039042.2	Klk13	NP_001034131.2	ILMN_1237292	004120598	S	701	AAACCCTGCAGTGCGCCAACATTGAACTGCGCTCAGATGAGGAGTGCCGG	7	+	50979137-50979186	7qB4	Mus musculus kallikrein related-peptidase 13 (Klk13), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	mGk-13; Egfbp-2	mGk-13; Egfbp-2
Mus musculus	RefSeq	ILMN_247655	ILMN_247655	KLK13	NM_001039042.2	NM_001039042.2		626834	110681721	NM_001039042.2	Klk13	NP_001034131.2	ILMN_3115315	007040110	A	599	TCCGTACCCTGAAACTCTCTGCAGATGACTGCCTGCCCACTGGCACCTGC	7	+	50976817-50976866	7qB4	Mus musculus kallikrein related-peptidase 13 (Klk13), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	mGk-13; Egfbp-2	mGk-13; Egfbp-2
Mus musculus	RefSeq	ILMN_247655	ILMN_247655	KLK13	NM_001039042.2	NM_001039042.2		626834	110681721	NM_001039042.2	Klk13	NP_001034131.2	ILMN_3040588	002450364	I	700	AAAACCCTGCAGTGCGCCAACATTGAACTGCGCTCAGATGAGGAGTGCCG	7	+	50979136-50979185	7qB4	Mus musculus kallikrein related-peptidase 13 (Klk13), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	mGk-13; Egfbp-2	mGk-13; Egfbp-2
Mus musculus	RefSeq	ILMN_201375	ILMN_201375	LOC385061	XM_358025.1	XM_358025.1			38093404	XM_358025.1	LOC385061		ILMN_1237768	004120520	S	155	AACAGAGCATCCATTGCCAAGAAGCCGGAAAAAGGGGCAGGCTTGAGGAC										
Mus musculus	RefSeq	ILMN_187004	ILMN_235105	2610030H06RIK	NM_001081356.1	NM_001081356.1		67048	124486866	NM_001081356.1	2610030H06Rik	NP_001074825.1	ILMN_2440349	000670398	S	2443	CAATGTGTTTGACCATTAAAATATTCACACTGGTATTTAGAATTATTATA	X	+	69068110-69068159	XqA7.2	Mus musculus RIKEN cDNA 2610030H06 gene (2610030H06Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI840175; RP23-304N5.3	AI840175; RP23-304N5.3
Mus musculus	RefSeq	ILMN_215596	ILMN_252694	CASC5	NM_029617.2	NM_029617.2		76464	125628637	NM_029617.2	Casc5	NP_083893.2	ILMN_2661412	000540739	S	6459	ACCAAGATCTACTTAAGGACTGAAAGTTTTCCCGTAAGACCCACAGATCA	2	+	118929791-118929813:118929814-118929840	2qE5	Mus musculus cancer susceptibility candidate 5 (Casc5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2310043D08Rik; MGC91208; 5730505K17Rik	2310043D08Rik; MGC91208; 5730505K17Rik
Mus musculus	RefSeq	ILMN_245192	ILMN_245192	RBMS2	NM_001039080.1	NM_001039080.1		56516	84872206	NM_001039080.1	Rbms2	NP_001034169.1	ILMN_3111877	004890102	A	5252	ACTCCCATGTCTATGCCAACACTACCTATCGCTCACTCTCCGTGGCTGAC	10	-	127566614-127566663	10qD3	Mus musculus RNA binding motif, single stranded interacting protein 2 (Rbms2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2610315E04Rik; Scr3	2610315E04Rik; Scr3
Mus musculus	RefSeq	ILMN_245192	ILMN_245192	RBMS2	NM_001039080.1	NM_001039080.1		56516	84872206	NM_001039080.1	Rbms2	NP_001034169.1	ILMN_3037580	001500647	I	189	TTACTTCTGGAGAATGTGTGTGGCAGCAGTGGGAGGCCTGAGGAGGGGCT	10	-	127617115-127617164	10qD3	Mus musculus RNA binding motif, single stranded interacting protein 2 (Rbms2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2610315E04Rik; Scr3	2610315E04Rik; Scr3
Mus musculus	RefSeq	ILMN_189487	ILMN_245192	RBMS2	NM_001039080.1	NM_001039080.1		56516	84872206	NM_001039080.1	Rbms2	NP_001034169.1	ILMN_2461707	005390132	S	5242	GTAGTTTCATACTCCCATGTCTATGCCAACACTACCTATCGCTCACTCTC	10	-	127566624-127566673	10qD3	Mus musculus RNA binding motif, single stranded interacting protein 2 (Rbms2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2610315E04Rik; Scr3	2610315E04Rik; Scr3
Mus musculus	RefSeq	ILMN_210503	ILMN_210503	BC016548	NM_174994.1	NM_174994.1		211039	33239404	NM_174994.1	BC016548	NP_778159.1	ILMN_2887435	003610544	S	452	CCCTTGGGGCTCTCAGAGACAGAACCACCAACTACAGAACATACATGGAC	2	-	103185121-103185170		Mus musculus cDNA sequence BC016548 (BC016548), mRNA.				MGC27847	MGC27847
Mus musculus	RefSeq	ILMN_210503	ILMN_210503	BC016548	NM_174994.1	NM_174994.1		211039	33239404	NM_174994.1	BC016548	NP_778159.1	ILMN_2606269	007380487	S	204	TGGACCTCTCAGAGTTCATGTTAACTGGTGACTTATTGCACTCAAGAGTC	2	-	103188930-103188979		Mus musculus cDNA sequence BC016548 (BC016548), mRNA.				MGC27847	MGC27847
Mus musculus	Riken	ILMN_205476	ILMN_205476	C920007D24RIK	ri|C920007D24|PX00178K03|AK050589|1150					AK050589	C920007D24Rik		ILMN_2572849	006480010	S	956	TGGCAGGTCCCGGTGCCGGTGTGGCTGTCTCTGGAACTTGATTTGCTCAT										
Mus musculus	RefSeq	ILMN_223317	ILMN_223317	FBXO25	NM_025785.2	NM_025785.2		66822	142368939	NM_025785.2	Fbxo25	NP_080061.1	ILMN_2762397	000830176	S	1815	CCCAGTGAGGCTGAAGTTCTCTTGTAGAAATTCCTTTCCTGGGTAAAGTG	8	+	13940328-13940377	8qA1.1	Mus musculus F-box protein 25 (Fbxo25), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9130015I06Rik; Fbx25; AI649137	9130015I06Rik; Fbx25; AI649137
Mus musculus	RefSeq	ILMN_205853	ILMN_320154	9330154J02RIK	XR_035460.1	XR_035460.1		442799	149259750	XR_035460.1	9330154J02Rik		ILMN_1226437	006370326	S	1830	GCACGTTGGTACATGCAGGGAAGTGCAGGTCTCAGGCTGGCCAGTGATTT				9qE3.1	PREDICTED: Mus musculus RIKEN cDNA 9330154J02 gene (9330154J02Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_222626	ILMN_259735	NPAL1	NM_001081205.1	NM_001081205.1		70701	124487088	NM_001081205.1	Npal1	NP_001074674.1	ILMN_2752454	002750167	S	630	GGGTCAACTGTGATGGTTATCCACGCCCCACAAGAGGGAGAAGTCACATC	5	+	73058091-73058140	5qC3.2	Mus musculus NIPA-like domain containing 1 (Npal1), mRNA.				3830408G10Rik	3830408G10Rik
Mus musculus	MEEBO	ILMN_185224	ILMN_185224	D11LGP2E	scl39552.13.1_17				13386455	NM_030150	D11Lgp2e		ILMN_2615439	001440139	S	746	GCTCGTCTCTTCCGCTACCTTGAGCATATGAGGCTTGTGGGACCCTTTGA										
Mus musculus	MEEBO	ILMN_214834	ILMN_214834	1110059H15RIK	scl068795.2_59				51706197	XM_485005	1110059H15Rik		ILMN_2652470	002350390	S	4358	TCAACTAAATGAAAATAAGAGTTGTTAGTGACGAGCATATGTTACAATAA										
Mus musculus	RefSeq	ILMN_189600	ILMN_189600	TRAPPC4	NM_021789.2	NM_021789.2		60409	31982682	NM_021789.2	Trappc4	NP_068561.1	ILMN_1225507	001240523	S	631	ACAGGGCAGTTCAGGCATTGAGATGCTGGAAACAGACACCTTCAAACTGC	9	-	44213346-44213395	9qA5.2	Mus musculus trafficking protein particle complex 4 (Trappc4), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IEA]; A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of neurotransmitter receptors [goid 45212] [evidence TAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1500017G03Rik; Sbd; HSPC172; TRS23; Sbdn; PTD009; Sdcbp2; AI303617	1500017G03Rik; Sbd; HSPC172; TRS23; Sbdn; PTD009; Sdcbp2; AI303617
Mus musculus	RefSeq	ILMN_189600	ILMN_189600	TRAPPC4	NM_021789.2	NM_021789.2		60409	31982682	NM_021789.2	Trappc4	NP_068561.1	ILMN_2790573	003370451	S	939	AGACGTGCTCCAGAGGGCTTTGCTGTGTCTACTCGGTGAGGGTCCTGTTG	9	-	44212021-44212070	9qA5.2	Mus musculus trafficking protein particle complex 4 (Trappc4), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IEA]; A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of neurotransmitter receptors [goid 45212] [evidence TAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1500017G03Rik; Sbd; HSPC172; TRS23; Sbdn; PTD009; Sdcbp2; AI303617	1500017G03Rik; Sbd; HSPC172; TRS23; Sbdn; PTD009; Sdcbp2; AI303617
Mus musculus	RefSeq	ILMN_213555	ILMN_213555	TEX16	NM_031382.2	NM_031382.2		83556	115299740	NM_031382.2	Tex16	NP_113559.2	ILMN_2638256	006560433	S	3622	CCATGTGACAATTGCCCCTTCCATATGATTTACATGTGGCAGAGTATGGA	X	+	109240585-109240634	XqE1	Mus musculus testis expressed gene 16 (Tex16), mRNA.					
Mus musculus	MEEBO	ILMN_209416	ILMN_209416	DUSP16	scl0001037.1_475	NM_181320.2			31343372	NM_181320.2	Dusp16		ILMN_2769543	004860112	S	1470	GTGCAGCTGGCTGGAACAATTTGTGGAGAGAGGATCATTTATTCTTGCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213247	ILMN_213247	HIBCH	NM_146108.1	NM_146108.1		227095	22122624	NM_146108.1	Hibch	NP_666220.1	ILMN_2635150	004070270	S	1137	GGAAACCAGCCAATCTAAAAGATGTTACGGATGAAGACTTGAATAGTTAC	1	+	52977137-52977186	1qC1.1	Mus musculus 3-hydroxyisobutyryl-Coenzyme A hydrolase (Hibch), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9083] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 3-hydroxy-2-methylpropanoyl-CoA + H2O = CoA + 3-hydroxy-2-methylpropanoate [goid 3860] [evidence IEA]	2610509I15Rik; AI648812; MGC31364	2610509I15Rik; AI648812; MGC31364
Mus musculus	MEEBO	ILMN_187038	ILMN_187038	3526401B18RIK	scl3767.1.1_123						3526401B18Rik		ILMN_2440634	006660202	S	19	ATAAACCGTATATCTCCTCTGATTTGTGACCAGGTGCAGGAGAAGGCCTG										
Mus musculus	MEEBO	ILMN_188985	ILMN_188985	2610009I02RIK	scl53014.9_624				27754011	NM_028115	2610009I02Rik		ILMN_2457372	003120370	S	8	GGAAGCAATAAGAGCTTGTGATCCCCTGGGCTGTAACATATAGTACCACC										
Mus musculus	RefSeq	ILMN_215127	ILMN_215127	PCDHB17	NM_053142.3	NM_053142.3		93888	148728176	NM_053142.3	Pcdhb17	NP_444372.2	ILMN_1214296	006620142	S	3179	GCCTAGAAATTGACGTTGAGTTTTCAATGGCTTACAATCTAGTCACACTC				18qB3	Mus musculus protocadherin beta 17 (Pcdhb17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcdhb16; mKIAA1621; PcdhbQ	Pcdhb16; mKIAA1621; PcdhbQ
Mus musculus	RefSeq	ILMN_196600	ILMN_196600	H2AFJ	NM_177688.4	NM_177688.4		232440	148539863	NM_177688.4	H2afj	NP_808356.1	ILMN_1222767	000770240	S	1609	GGGGGAGTCAGAGTTCAAGTCTTCCTCTTCATTTGCAGTATTTCCCCTCG				6qG1	Mus musculus H2A histone family, member J (H2afj), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	E130307C13; MGC118637	E130307C13; MGC118637
Mus musculus	RefSeq	ILMN_196600	ILMN_196600	H2AFJ	NM_177688.4	NM_177688.4		232440	148539863	NM_177688.4	H2afj	NP_808356.1	ILMN_2524980	006020619	S	1370	CTGGGATCAGGTTTCTTCTTTTCCGTAACTGTTGAGTTGGGTGATGGCGC				6qG1	Mus musculus H2A histone family, member J (H2afj), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	E130307C13; MGC118637	E130307C13; MGC118637
Mus musculus	RefSeq	ILMN_223891	ILMN_227146	2310007A19RIK	NM_025506.2	NM_025506.2		66353	115292447	NM_025506.2	2310007A19Rik	NP_079782.1	ILMN_1222196	003310543	S	552	AGTGTGGATTTCCAAGCTGTGTGGGCCTTCTCCTATCAGGGGCCTTTAAG	3	-	94268933-94268982	3qF2.1	Mus musculus RIKEN cDNA 2310007A19 gene (2310007A19Rik), mRNA.				MGC129400	MGC129400
Mus musculus	RefSeq	ILMN_224123	ILMN_257869	OLFR1062	NM_147078.2	NM_147078.2		259082	124301220	NM_147078.2	Olfr1062	NP_667289.2	ILMN_2775190	000770088	S	894	GTGTGCATTGAAAGAATTCCTAAAAAATCCATGCAAAAAATTCAATCTTA	2	-	86262888-86262937	2qD	Mus musculus olfactory receptor 1062 (Olfr1062), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR185-1	MOR185-1
Mus musculus	RefSeq	ILMN_220045	ILMN_244625	BC016423	XM_980152.1	XM_980152.1		105203	94395770	XM_980152.1	BC016423	XP_985246.1	ILMN_1223300	006480541	S	6175	GGAGTTGTGAGAGAGGCTTGTAAGAGCCCTTTCTGGTTCTACCTCGTTGA					PREDICTED: Mus musculus cDNA sequence BC016423, transcript variant 2 (BC016423), mRNA.					
Mus musculus	RefSeq	ILMN_210554	ILMN_210554	NFRKB	NM_172766.2	NM_172766.2		235134	40254248	NM_172766.2	Nfrkb	NP_766354.2	ILMN_2830686	007330367	S	4959	CCTGGCCATTTCACATTTCTTAGCCACCATCAGCCACAGACAGAGCTCAG	9	+	31228737-31228786	9qA4	Mus musculus nuclear factor related to kappa B binding protein (Nfrkb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	A530090G11Rik	A530090G11Rik
Mus musculus	RefSeq	ILMN_210554	ILMN_210554	NFRKB	NM_172766.2	NM_172766.2		235134	40254248	NM_172766.2	Nfrkb	NP_766354.2	ILMN_2606777	001300075	S	4135	CTAGGTTCTGCTGCCACGCTCCAGAGTGAAGCTCTGAAAGGGGTCCCTCT	9	+	31227913-31227962	9qA4	Mus musculus nuclear factor related to kappa B binding protein (Nfrkb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	A530090G11Rik	A530090G11Rik
Mus musculus	MEEBO	ILMN_190879	ILMN_190879	5830411I20	scl26886.1_238						5830411I20		ILMN_2474052	004150403	S	3	GGTGCGTGTTAGCAGTAGAGACTGTTACAGGGTTGTCCCTTCTAGGTGCG										
Mus musculus	RefSeq	ILMN_186062	ILMN_318059	4930412O13RIK	XR_035725.1	XR_035725.1		381347	149249054	XR_035725.1	4930412O13Rik		ILMN_2432292	000730484	S	445	AGAGCCCGGGCGGGGATTGCAGCGTGCACGGAATCGAATTAAACGCATCT				2qA1	PREDICTED: Mus musculus RIKEN cDNA 4930412O13 gene (4930412O13Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_210127	ILMN_318059	4930412O13RIK	XR_035725.1	XR_035725.1		381347	149249054	XR_035725.1	4930412O13Rik		ILMN_2602505	000840273	S	286	TTGATTAATAGAAAACGAAGTGAAAAGACCGTGGTCGCTGTGCGTCTGGG				2qA1	PREDICTED: Mus musculus RIKEN cDNA 4930412O13 gene (4930412O13Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_198936	ILMN_198936	LOC235470	XM_150190.1	XM_150190.1			20890789	XM_150190.1	LOC235470		ILMN_1222748	000010164	S	299	CACAAAGCACTGCATGGAGGCATCAGCAGACAGCCGAGGAGAGGGAAGAG										
Mus musculus	RefSeq	ILMN_192794	ILMN_245475	TM7SF3	NM_026281.2	NM_026281.2		67623	119964707	NM_026281.2	Tm7sf3	NP_080557.2	ILMN_2491392	000540543	S	3038	CTGGCTTGTCACATGCTTGCATTTTAGTTGTACAGATTGTTGGAGAACTA	6	-	146551022-146551071	6qG3	Mus musculus transmembrane 7 superfamily member 3 (Tm7sf3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			2010003B14Rik; NARP1	2010003B14Rik; NARP1
Mus musculus	RefSeq	ILMN_218397	ILMN_218397	SPATA3	NM_028647.1	NM_028647.1		70060	22208841	NM_028647.1	Spata3	NP_082923.1	ILMN_2695308	003610678	S	881	ACTGGGTGCACCAGATAACTGGAGGAAGTACTCTCAGGACAAAGCAGGGC	1	+	87858183-87858232	1qC5	Mus musculus spermatogenesis associated 3 (Spata3), transcript variant 3, mRNA.				Mtsarg1; 1700029H01Rik; 1700011N12Rik; 4930424D10Rik; Tsarg1	Mtsarg1; 1700029H01Rik; 1700011N12Rik; 4930424D10Rik; Tsarg1
Mus musculus	RefSeq	ILMN_193322	ILMN_236895	LSM12	NM_172947.3	NM_172947.3		268490	146198816	NM_172947.3	Lsm12	NP_766535.1	ILMN_1227773	000840291	S	972	CTGCCATCCTGATTTTATAAGTGGATATACTTGCCTTCTGAATGATTGAA				11qD	Mus musculus LSM12 homolog (S. cerevisiae) (Lsm12), mRNA.				1110059P07; 1110032E16Rik; 2600001B17Rik	1110059P07; 1110032E16Rik; 2600001B17Rik
Mus musculus	RefSeq	ILMN_193322	ILMN_236895	LSM12	NM_172947.3	NM_172947.3		268490	146198816	NM_172947.3	Lsm12	NP_766535.1	ILMN_2730926	007570367	S	48	AAGATGGCGGCACCTCCGGGCGAGTACTTCAGCGTTGGGAGCCAGGTGTC				11qD	Mus musculus LSM12 homolog (S. cerevisiae) (Lsm12), mRNA.				1110059P07; 1110032E16Rik; 2600001B17Rik	1110059P07; 1110032E16Rik; 2600001B17Rik
Mus musculus	RefSeq	ILMN_221199	ILMN_221199	NUDCD3	NM_173748.2	NM_173748.2		209586	31343434	NM_173748.2	Nudcd3	NP_776109.1	ILMN_2837226	002320546	S	3421	ACATGAGTGGTCGTTACCCTTGACTTCTAGCCGTGAGTCCTGCTTCCCTC	11	-	6005897-6005946	11qA1	Mus musculus NudC domain containing 3 (Nudcd3), mRNA.				BC024322; mKIAA1068; AI427847; RP23-28G13.2; RP23-198N14.1; KIAA1068	BC024322; mKIAA1068; AI427847; RP23-28G13.2; RP23-198N14.1; KIAA1068
Mus musculus	Riken	ILMN_202416	ILMN_202416	2310004H21RIK	ri|2310004H21|ZX00038L17|AK009138|520					AK009138	2310004H21Rik		ILMN_1225234	002470424	S	372	GGGCTTCCTCAATGTGTCACGGTTGAGCCATGCCATCTTCCAGTGTAGAG										
Mus musculus	RefSeq	ILMN_200185	ILMN_200185	LOC385883	XM_358983.1	XM_358983.1			38080842	XM_358983.1	LOC385883		ILMN_1222208	003130044	S	457	CAGGAAAGTCAGAAGAGAGAAGAACAAAGATTCCCAGATCAAAGGACCTG										
Mus musculus	MEEBO	ILMN_209409	ILMN_209409	1110007F05RIK	scl23736.8.1_149	XM_355561.1			38079349	XM_355561.1	1110007F05Rik		ILMN_2595530	002140408	S	470	ATGACCTTTTTCTATTGTGAAGCTTCTATCTTTTTGAATGTGATTTATAA										
Mus musculus	RefSeq	ILMN_184355	ILMN_251894	UHRF1BP1L	NM_029166.1	NM_029166.1		75089	34536812	NM_029166.1	Uhrf1bp1l	NP_083442.1	ILMN_1258677	006510176	S	4617	GCTAGAGCGCTGGAGAAGGACGGCTAGGTTTAACAGAAGGATGTAACCAG	10	+	89280820-89280869	10qC2	Mus musculus UHRF1 (ICBP90) binding protein 1-like (Uhrf1bp1l), mRNA.				4930506D01Rik; mKIAA0701; 2010319N22Rik; KIAA0701; AA589495; C80672	4930506D01Rik; mKIAA0701; 2010319N22Rik; KIAA0701; AA589495; C80672
Mus musculus	Riken	ILMN_206367	ILMN_206367	AEBP1	ri|E230025G16|PX00210C02|AK087614|2047					AK087614	Aebp1		ILMN_2579578	002190435	S	1818	GCAGCCAAGAGTTGCTGCTGTTCACTCTGGATGTACAGATAGGATGCCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200849	ILMN_326260	LOC100039094	XM_001472249.1	XM_001472249.1		100039094	149257200	XM_001472249.1	LOC100039094	XP_001472299.1	ILMN_1256974	005910561	S	493	AGTCGGGAGCCCAGCCAGAAGGAGACCAGGAGGCAGACGTTGGTGCCTTA	7	+	48154308-48154357	7qB3	PREDICTED: Mus musculus hypothetical protein LOC100039094 (LOC100039094), mRNA.					
Mus musculus	RefSeq	ILMN_192770	ILMN_247761	RAD51C	NM_053269.2	NM_053269.2		114714	60593000	NM_053269.2	Rad51c	NP_444499.1	ILMN_2748321	003840356	S	1015	ACACCTCAGGGATTTAGAGACGCTGTTGTCACTGCTGCCTCATCACAGAC	11	-	87192942-87192989:87194334-87194335	11qC	Mus musculus Rad51 homolog c (S. cerevisiae) (Rad51c), mRNA.	A protein complex that mediates the conversion of a Holliday junction into two separate duplex DNA molecules; the complex includes a single- or multisubunit helicase that catalyzes the extension of heteroduplex DNA by branch migration and a nuclease that resolves the junction by nucleolytic cleavage [goid 48476] [evidence IC ]	The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence IMP]; The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a female [goid 7066] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Catalysis of the endonucleolytic cleavage at a junction such as a reciprocal single-stranded crossover between two homologous DNA duplexes (Holliday junction) [goid 8821] [evidence IMP]	Rad51l2	Rad51l2
Mus musculus	RefSeq	ILMN_192770	ILMN_247761	RAD51C	NM_053269.2	NM_053269.2		114714	60593000	NM_053269.2	Rad51c	NP_444499.1	ILMN_2491161	003360253	S	1844	GTGGAAAGCTGACCTTATGTTACCTATCTGGATTTACCACCCAGAGTGGA	11	-	87192113-87192162	11qC	Mus musculus Rad51 homolog c (S. cerevisiae) (Rad51c), mRNA.	A protein complex that mediates the conversion of a Holliday junction into two separate duplex DNA molecules; the complex includes a single- or multisubunit helicase that catalyzes the extension of heteroduplex DNA by branch migration and a nuclease that resolves the junction by nucleolytic cleavage [goid 48476] [evidence IC ]	The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence IMP]; The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a female [goid 7066] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Catalysis of the endonucleolytic cleavage at a junction such as a reciprocal single-stranded crossover between two homologous DNA duplexes (Holliday junction) [goid 8821] [evidence IMP]	Rad51l2	Rad51l2
Mus musculus	RefSeq	ILMN_197346	ILMN_227261	WFDC10	NM_001039501.2	NM_001039501.2		629756	141803526	NM_001039501.2	Wfdc10	NP_001034590.1	ILMN_2527805	004780735	S	173	CAAGGAGTGTGAGGGGAAGCCCAAACGGTATCTGTGCAGCCGCCATTGTG	2	+	164482582-164482631	2qH3	Mus musculus WAP four-disulfide core domain 10 (Wfdc10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218571	ILMN_250260	TMEM184B	NM_172608.1	NM_172608.1		223693	61969667	NM_172608.1	Tmem184b	NP_766196.1	ILMN_2697433	003830612	S	3226	CCTGTGACTGCCATGCGTTCCACCAGAAAGCCGCTCTATTTTGGTCTCTG	15	-	79191199-79191248	15qE1	Mus musculus transmembrane protein 184b (Tmem184b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4732495E13Rik; 2610507A11	4732495E13Rik; 2610507A11
Mus musculus	RefSeq	ILMN_191442	ILMN_239272	PXDN	NM_181395.1	NM_181395.1		69675	75677554	NM_181395.1	Pxdn	NP_852060.1	ILMN_1256073	005860086	S	452	GATCCAATCAATTGACAGGCAAGCATTTAAGGGACTTGCCTCTCTAGAGC	12	+	30664123-30664172	12qA2	Mus musculus peroxidasin homolog (Drosophila) (Pxdn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C85409; 2310075M15Rik; E330004E07; mKIAA0230	C85409; 2310075M15Rik; E330004E07; mKIAA0230
Mus musculus	RefSeq	ILMN_239272	ILMN_239272	PXDN	NM_181395.1	NM_181395.1		69675	75677554	NM_181395.1	Pxdn	NP_852060.1	ILMN_2828896	000610280	S	4684	GTGTTTGTAGAAGGAAATTGAGCAGGCGGGAGTGGGTGCAGGCTCTGGCC	12	+	30700593-30700642	12qA2	Mus musculus peroxidasin homolog (Drosophila) (Pxdn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C85409; 2310075M15Rik; E330004E07; mKIAA0230	C85409; 2310075M15Rik; E330004E07; mKIAA0230
Mus musculus	RefSeq	ILMN_219682	ILMN_219682	PIK3R5	NM_177320.2	NM_177320.2		320207	86262160	NM_177320.2	Pik3r5	NP_796294.2	ILMN_1234494	000070360	S	1853	TCTCTGAGCCAAGCATCTCCACTCCCTGCAGACTCCCTGAAGTACCCCAG	11	+	68306684-68306733	11qB3	Mus musculus phosphoinositide-3-kinase, regulatory subunit 5, p101 (Pik3r5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	RP23-432M23.2; F730038I15Rik; AV230647	RP23-432M23.2; F730038I15Rik; AV230647
Mus musculus	RefSeq	ILMN_260240	ILMN_260240	GM904	NM_001033770.1	NM_001033770.1		380845	85702080	NM_001033770.1	Gm904	NP_001028942.1	ILMN_2921438	001510685	S	472	GCTTTATTGATGCCAGAGGCCTGACGAAGCTCCATCCCAGGCTAAAGGAC	13	+	50741030-50741079	13qA5	Mus musculus gene model 904, (NCBI) (Gm904), mRNA.				Gm1135	Gm1135
Mus musculus	RefSeq	ILMN_197190	ILMN_260240	GM904	NM_001033770.1	NM_001033770.1		380845	85702080	NM_001033770.1	Gm904	NP_001028942.1	ILMN_1251608	003120240	S	225	CCACAGGATGTGAAGAGGTGGCAGAGGAAGACCAGTAAGAAAACTGCTAC	13	+	50738821-50738826:50740052-50740095	13qA5	Mus musculus gene model 904, (NCBI) (Gm904), mRNA.				Gm1135	Gm1135
Mus musculus	RefSeq	ILMN_217788	ILMN_240681	4831426I19RIK	NM_001042699.1	NM_001042699.1		212073	111607452	NM_001042699.1	4831426I19Rik	NP_001036164.1	ILMN_2687612	005560131	S	5217	AGAGGGATTGGGGGAGAGCTGTTTGCTACGAATGTGGGCGTGTCTCCTGA	12	-	106168328-106168377	12qE	Mus musculus RIKEN cDNA 4831426I19 gene (4831426I19Rik), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	nesprin-3; MGC106312	nesprin-3; MGC106312
Mus musculus	RefSeq	ILMN_200151	ILMN_200151	LOC385809	XM_358952.1	XM_358952.1			38080710	XM_358952.1	LOC385809		ILMN_1255896	005870735	S	115	ACACTGGCTGCAGAGTTCAGGCCCATGTCTGCTGAGGGTTCTGGCCCAAA										
Mus musculus	RefSeq	ILMN_186583	ILMN_228679	SPN	NM_009259.4	NM_009259.4		20737	83716007	NM_009259.4	Spn	NP_033285.1	ILMN_1255969	001690167	S	3582	GTGGGGTCGGGAAAATTAAATGATCTGTAAATACATCTGTAAGAAGCTAC	7	-	134277321-134277370	7qF3	Mus musculus sialophorin (Spn), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan [goid 1562] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence ISO]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism [goid 50688] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response [goid 1808] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell activation [goid 50868] [evidence IMP]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any part of a bacterial cell [goid 8367] [evidence ISO]; Interacting selectively with any part of a bacterial cell [goid 8367] [evidence IMP]	Cd43; Ly48; Ly-48; Galgp; A630014B01Rik	Cd43; Ly48; Ly-48; Galgp; A630014B01Rik
Mus musculus	RefSeq	ILMN_216745	ILMN_216745	PLEKHA4	NM_148927.1	NM_148927.1		69217	22507324	NM_148927.1	Plekha4	NP_683729.1	ILMN_3102085	001780170	A	1878	AATGTCGTCAACCCTCATCTCCACTGCTGAGAACTAAGGCCCCGCTGGCG	7	+	52804639-52804676:52805174-52805185	7qB4	Mus musculus pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 (Plekha4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	C88169; PEPP1; 2410005C22Rik	C88169; PEPP1; 2410005C22Rik
Mus musculus	RefSeq	ILMN_216745	ILMN_216745	PLEKHA4	NM_148927.1	NM_148927.1		69217	22507324	NM_148927.1	Plekha4	NP_683729.1	ILMN_1243826	005860753	S	2557	GGGCCAGGGCCGCTATGGTCAAAGATTGATTTTCCCAACACTGTCCAAAA	7	+	52809501-52809550	7qB4	Mus musculus pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 (Plekha4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	C88169; PEPP1; 2410005C22Rik	C88169; PEPP1; 2410005C22Rik
Mus musculus	RefSeq	ILMN_216745	ILMN_216745	PLEKHA4	NM_148927.1	NM_148927.1		69217	22507324	NM_148927.1	Plekha4	NP_683729.1	ILMN_3028896	003710730	I	1677	CAGACTTGGTGGCAAGTACCCTTATCTGCGGAGATATCTCACCAGCCCCT	7	+	52803912-52803961	7qB4	Mus musculus pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 (Plekha4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	C88169; PEPP1; 2410005C22Rik	C88169; PEPP1; 2410005C22Rik
Mus musculus	RefSeq	ILMN_251588	ILMN_251588	PHF14	NM_029404.1	NM_029404.1		75725	21313037	NM_029404.1	Phf14	NP_083680.1	ILMN_2988275	001090747	S	3122	CTACTCAAAGTGATCGGGGGAGGCGGGCATGGATGGAAAGCAAAAGGTGC	6	+	11957782-11957831	6qA1	Mus musculus PHD finger protein 14 (Phf14), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0783; 1110001C23Rik; 5730446A07Rik; 4932409F11Rik; KIAA0783; AV297001; AA623952	mKIAA0783; 1110001C23Rik; 5730446A07Rik; 4932409F11Rik; KIAA0783; AV297001; AA623952
Mus musculus	RefSeq	ILMN_215338	ILMN_215338	SP8	NM_177082.3	NM_177082.3		320145	31581568	NM_177082.3	Sp8	NP_796056.2	ILMN_2658312	000430392	S	3921	GGAGACAGAGGGGGTCAAGCTAACAAAAGCTTGTTTTCTGGCACTCTATG	12	+	120090673-120090722	12qF2	Mus musculus trans-acting transcription factor 8 (Sp8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	mBtd; D930049B17Rik; MGC105193	mBtd; D930049B17Rik; MGC105193
Mus musculus	Riken	ILMN_202625	ILMN_202625	5730593H20RIK	ri|5730593H20|PX00093G20|AK019986|886					AK019986	5730593H20Rik		ILMN_2551039	006590551	S	734	TCATGCATTCCTTTGCTAGATCTTGGTACAACTGACTGTTCCTACCCCCA										
Mus musculus	MEEBO	ILMN_223936	ILMN_223936	AES	scl38644.7_75				6754071	NM_010347	Aes		ILMN_1213591	004200193	S	777	GACGCCAGAGGGACACCCCACGCTAAGGGTTCTTCCCCACCTTCAACATT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199554	ILMN_257720	MTR	NM_001081128.2	NM_001081128.2		238505	153792499	NM_001081128.2	Mtr	NP_001074597.1	ILMN_2594180	002630674	S	1829	GTGGAGGTCTTTCCAACTTATCCTTCTCCTTCCGAGGGATGGAAGCCATT				13qA1	Mus musculus 5-methyltetrahydrofolate-homocysteine methyltransferase (Mtr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IMP]	Interacting selectively with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 31419] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine [goid 8898] [evidence IEA]; Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = diphosphate + dihydropteroate [goid 4156] [evidence IEA]; Catalysis of the reaction: 5-methyltetrahydrofolate + L-homocysteine = tetrahydrofolate + L-methionine [goid 8705] [evidence IMP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]	MS; AI894170; D830038K18Rik	MS; AI894170; D830038K18Rik
Mus musculus	RefSeq	ILMN_184161	ILMN_317930	V2R3	XM_001474565.1	XM_001474565.1		22309	149265953	XM_001474565.1	V2r3	XP_001474615.1	ILMN_2416361	007160240	S	2540	CTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAAGCCAGT					PREDICTED: Mus musculus vomeronasal 2, receptor, 3, transcript variant 2 (V2r3), mRNA.					
Mus musculus	RefSeq	ILMN_211255	ILMN_211255	AMAC1	NM_019871.2	NM_019871.2		56293	114145472	NM_019871.2	Amac1	NP_063924.2	ILMN_1225521	002630452	S	987	GCTGGAGCTGTGTGGTGGCAGTGGGGCTCCTTGCATTGGTTTCCTTTGTA	11	-	69573849-69573898	11qB3	Mus musculus acyl-malonyl condensing enzyme 1 (Amac1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_207460	ILMN_207460	PEA15A	NM_011063.2	NM_011063.2		18611	86439980	NM_011063.2	Pea15a	NP_035193.1	ILMN_1260506	001190291	I	486	CCCGTATTCCCAGTGCCAAGAAGTACAAAGACATTATCCGGCAGCCCTCT	1	-	174128801-174128821:174129242-174129270	1qH3	Mus musculus phosphoprotein enriched in astrocytes 15A (Pea15a), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence NAS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with protein kinase C [goid 5080] [evidence TAS]	Pkcs15; Pea15; PEA-15; Mat1	Pkcs15; Pea15; PEA-15; Mat1
Mus musculus	RefSeq	ILMN_184878	ILMN_184878	TRAP1	NM_026508.2	NM_026508.2		68015	118129831	NM_026508.2	Trap1	NP_080784.1	ILMN_2422333	007150292	S	2166	GATTTAGTGTCAACCCAGGTCTTCTCGGGTGATAATGGACCTGCCTGGGG	16	-	4040058-4040107	16qA1	Mus musculus TNF receptor-associated protein 1 (Trap1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2410002K23Rik; HSP75	2410002K23Rik; HSP75
Mus musculus	RefSeq	ILMN_197367	ILMN_242574	NDUFS6	NM_010888.1	NM_010888.1		407785	56711243	NM_010888.1	Ndufs6	NP_035018.1	ILMN_1233115	004880037	S	60	ACGGGGTTTCGGGGTTCAAGTGTCGCCGAGCGGGGAAAAGATCACGCATA	13	-	73465794-73465843	13qC1	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 6 (Ndufs6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		MGC107676; IP13; BC059730	MGC107676; IP13; BC059730
Mus musculus	RefSeq	ILMN_242574	ILMN_242574	NDUFS6	NM_010888.1	NM_010888.1		407785	56711243	NM_010888.1	Ndufs6	NP_035018.1	ILMN_2842572	005910475	S	387	TCCTATGGAACATCTCCACGCTGGGTGTTCTGTGTGAGGCCACTGCTCTG	13	-	73457366-73457415	13qC1	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 6 (Ndufs6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		MGC107676; IP13; BC059730	MGC107676; IP13; BC059730
Mus musculus	MEEBO	ILMN_220567	ILMN_220567	PKM2	scl0004183.1_9	XM_131934.4			38079553	XM_131934.4	Pkm2		ILMN_2723860	004610192	S	1089	TGCCATCTACCACTTGCAGCTATTTGAGGAATTCCGCCGCCTGGCGCCCA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IDA]		
Mus musculus	RefSeq	ILMN_188732	ILMN_224834	RAB21	NM_024454.1	NM_024454.1		216344	33859750	NM_024454.1	Rab21	NP_077774.1	ILMN_2763867	005690239	S	1586	CTGTTATAGCGCTCACCACCCCTTCCCTTGTCTTAACGTGGAAGTGCGCA	10	-	114727106-114727155	10qD2	Mus musculus RAB21, member RAS oncogene family (Rab21), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	9630024B22	9630024B22
Mus musculus	RefSeq	ILMN_217390	ILMN_238237	BC039632	NM_001081268.1	NM_001081268.1		330657	124486910	NM_001081268.1	BC039632	NP_001074737.1	ILMN_2682674	002030370	S	1904	CCCAAGTTCTGCTTTCCAACAGAGATGTCTCCAGTATTCCCTAGCCAATC	7	-	135029535-135029584	7qF3	Mus musculus cDNA sequence BC039632 (BC039632), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	mFLJ00289; FLJ00289	mFLJ00289; FLJ00289
Mus musculus	RefSeq	ILMN_215689	ILMN_215689	C87499	NM_198663.2	NM_198663.2		381590	142350864	NM_198663.2	C87499	NP_941065.1	ILMN_2662468	001190452	S	1456	CGTTGCATTAAATGTCGTGGCTTCTTGGTCTATGATCTGGAGACCCAACG	4	-	88273545-88273594	4qC4	Mus musculus expressed sequence C87499 (C87499), mRNA.				MGC60825	MGC60825
Mus musculus	Riken	ILMN_205998	ILMN_205998	MITF	ri|D830028J19|PX00200E19|AK052895|1117					AK052895	Mitf		ILMN_1241269	002570600	S	175	ATGCGTGAGCAGATGCAGGAGCAGGAGCGCAGGGAGCAGCAGCAGAAGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISS]; The continuous turnover of bone matrix and mineral that involves first, an increase in resorption (osteoclastic activity) and later, reactive bone formation (osteoblastic activity). The process of bone remodeling takes place in the adult skeleton at discrete foci. The process ensures the mechanical integrity of the skeleton throughout life and plays an important role in calcium homeostasis. An imbalance in the regulation of bone resorption and bone formation results in many of the metabolic bone diseases, such as osteoporosis [goid 46849] [evidence IMP]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Any process that modulates the frequency, rate or extent of osteoclast differentiation [goid 45670] [evidence IGI]; Any process that modulates the frequency, rate or extent of osteoclast differentiation [goid 45670] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]		
Mus musculus	RefSeq	ILMN_187546	ILMN_227876	TTC15	NM_178811.3	NM_178811.3		217449	31982374	NM_178811.3	Ttc15	NP_848926.2	ILMN_2502614	005700612	S	2794	GCCATATGCATGGCATTCAGAAACAGGGAACATAAGGACGTGGGGTTCCC	12	-	29375956-29376005	12qA2	Mus musculus tetratricopeptide repeat domain 15 (Ttc15), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	D930014A20Rik; CGI-87	D930014A20Rik; CGI-87
Mus musculus	RefSeq	ILMN_221305	ILMN_221305	COX7A2	NM_009945.3	NM_009945.3		12866	83921587	NM_009945.3	Cox7a2	NP_034075.2	ILMN_2733698	002750059	S	564	CTGCCAATAAAGCAATCCTTAACCATTTTGTGTCTCCCTTTTCACTTGAG	9	-	79603188-79603237	9qE1	Mus musculus cytochrome c oxidase, subunit VIIa 2 (Cox7a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]	COX7AL; CoxVIIa-L; Cox7a3	COX7AL; CoxVIIa-L; Cox7a3
Mus musculus	RefSeq	ILMN_216603	ILMN_216603	DDX17	NM_199079.1	NM_199079.1		67040	40068490	NM_199079.1	Ddx17	NP_951061.1	ILMN_2751194	001820097	S	1726	CCCACCCCGTTTATTTTCAAAGTTCCGTCTGGCTCCTAGCAGTCTTTGGT	15	-	79366136-79366185	15qE1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (Ddx17), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	MGC79147; Gm926; 2610007K22Rik; C80929; AI047725; A430025E01Rik	MGC79147; Gm926; 2610007K22Rik; C80929; AI047725; A430025E01Rik
Mus musculus	Riken	ILMN_207447	ILMN_207447	D730024P12RIK	ri|D730024P12|PX00673F12|AK085716|3371					AK085716	D730024P12Rik		ILMN_2587667	001430392	S	1781	GATCAGCGGCCTCTTGACAGAGCTGAGGAAACATCCTGAGGACCACTGGG										
Mus musculus	RefSeq	ILMN_222204	ILMN_222204	E130203B14RIK	NM_178791.2	NM_178791.2		320736	31341937	NM_178791.2	E130203B14Rik	NP_848906.1	ILMN_2803786	007510133	S	2536	GTGTCTAGTCGCTCTTCCTTTACCACATAGACCACTAACCGTGAATTGAC	14	+	31768374-31768423	14qB	Mus musculus RIKEN cDNA E130203B14 gene (E130203B14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_207530	ILMN_207530	LOC280487	XM_207856.3	XM_207856.3			38081456	XM_207856.3	LOC280487		ILMN_2588002	006580373	I	566	CAGGAAAGTGGAGACTGCTCCATGACCTCAGAGCCATTAATGAGCAAATG										
Mus musculus	RefSeq	ILMN_242298	ILMN_242298	ZFP386	NM_001004066.2	NM_001004066.2		56220	93102384	NM_001004066.2	Zfp386	NP_001004066.1	ILMN_3067404	004210634	I	274	AGGACAGCATCCCTGCAGAGCTCCCAACGCACTGCCACCATTTCATGCCT	12	+	117293320-117293369	12qF2	Mus musculus zinc finger protein 386 (Kruppel-like) (Zfp386), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Kzf1; KIAA4205; mKIAA4205	Kzf1; KIAA4205; mKIAA4205
Mus musculus	RefSeq	ILMN_202085	ILMN_324343	2700046G09RIK	XR_035347.1	XR_035347.1		67188	149270424	XR_035347.1	2700046G09Rik		ILMN_2546887	001940215	S	487	AGCTCCCAAGGTGAATCTGATGGCCGCTTTCCCTAAGCAGTAGAGACCCT	19	+	32464511-32464560	19qC1	PREDICTED: Mus musculus RIKEN cDNA 2700046G09 gene (2700046G09Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_216339	ILMN_324343	2700046G09RIK	XR_035347.1	XR_035347.1		67188	149270424	XR_035347.1	2700046G09Rik		ILMN_1256315	003440563	S	1278	CTCGCCTTGAAAGTAACTTGAATGGCGTGGTCATAAGAGATGCTTCAGAG	19	+	32465302-32465351	19qC1	PREDICTED: Mus musculus RIKEN cDNA 2700046G09 gene (2700046G09Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_217459	ILMN_217459	GAS7	NM_008088.1	NM_008088.1		14457	6679944	NM_008088.1	Gas7	NP_032114.1	ILMN_2924831	004830138	S	2652	GCACATCACGGATAGCTTACTAATCTTGGACCTTCTGGCAGCCCATCCAC	11	+	67500928-67500977	11qB3	Mus musculus growth arrest specific 7 (Gas7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites [goid 48812] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	AW124766; Gas7-cb	AW124766; Gas7-cb
Mus musculus	RefSeq	ILMN_217459	ILMN_217459	GAS7	NM_008088.1	NM_008088.1		14457	6679944	NM_008088.1	Gas7	NP_032114.1	ILMN_2776850	003830577	S	2816	CCAACCTGTGCTCAGCATGAACTGTGACATCAGCCTTTGATAGTAGGACA	11	+	67501092-67501141	11qB3	Mus musculus growth arrest specific 7 (Gas7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites [goid 48812] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	AW124766; Gas7-cb	AW124766; Gas7-cb
Mus musculus	RefSeq	ILMN_190239	ILMN_214128	ERLIN1	NM_145502.2	NM_145502.2		226144	31981798	NM_145502.2	Erlin1	NP_663477.2	ILMN_2468392	003310022	S	3001	ACAATGGCGCTTCCCTGCTCCTCACCGGGGCCTATGACCGGTAAGAAATC	19	-	44109554-44109603	19qC3	Mus musculus ER lipid raft associated 1 (Erlin1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			C80197; Keo4; Spfh1; 2810439N09Rik	C80197; Keo4; Spfh1; 2810439N09Rik
Mus musculus	RefSeq	ILMN_214128	ILMN_214128	ERLIN1	NM_145502.2	NM_145502.2		226144	31981798	NM_145502.2	Erlin1	NP_663477.2	ILMN_1224256	003370288	S	3013	GAAAGCACTTCCACTTGAGCTCCTTATGGAGTGAGCTTCCCTGTGCCCAC	19	-	44109542-44109591	19qC3	Mus musculus ER lipid raft associated 1 (Erlin1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			C80197; Keo4; Spfh1; 2810439N09Rik	C80197; Keo4; Spfh1; 2810439N09Rik
Mus musculus	RefSeq	ILMN_188771	ILMN_234279	LOC676704	XM_001003389.1	XM_001003389.1		676704	94400426	XM_001003389.1	LOC676704	XP_001003389.1	ILMN_2455575	004590097	S	1672	TACTGTATATCTTTTTATTTACATACCTGTATGGAAAATATTTAGTCTGC					PREDICTED: Mus musculus similar to downregulated in ovarian cancer 1 isoform 2 (LOC676704), mRNA.					
Mus musculus	RefSeq	ILMN_216569	ILMN_234279	LOC676704	XM_001003389.1	XM_001003389.1		676704	94400426	XM_001003389.1	LOC676704	XP_001003389.1	ILMN_1223198	004730634	S	1277	CACTTAGGAAGTCCTTACATGCAAGCTGTGGCTGGCCCCATGAGACCTGC					PREDICTED: Mus musculus similar to downregulated in ovarian cancer 1 isoform 2 (LOC676704), mRNA.					
Mus musculus	Riken	ILMN_203719	ILMN_203719	9830004G04RIK	ri|9830004G04|PX00117F11|AK036390|3130					AK036390	9830004G04Rik		ILMN_1254898	006060463	S	1210	GATACAAGTAGTGCTGGCGATTTTCTAAACGACAATGCGGTTGAGATCCC										
Mus musculus	RefSeq	ILMN_238149	ILMN_238149	TBP	NM_013684.2	NM_013684.2		21374	111185894	NM_013684.2	Tbp	NP_038712.2	ILMN_2869461	005570341	S	1188	AGCACTACTGTGAGTTGCTTGCTCTGTGCTGCTACTTGGGCGGCACTGCC	17	+	15653927-15653976	17qA2	Mus musculus TATA box binding protein (Tbp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [evidence TAS]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IDA]; The pronucleus originating from the spermatozoa that was involved in fertilization [goid 1940] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	SCA17; mTBP; TFIID; GTF2D1; Gtf2d	SCA17; mTBP; TFIID; GTF2D1; Gtf2d
Mus musculus	RefSeq	ILMN_188669	ILMN_238149	TBP	NM_013684.2	NM_013684.2		21374	111185894	NM_013684.2	Tbp	NP_038712.2	ILMN_2454677	002140341	S	1270	GTTGGTGATTGTTGGTTTAAGGGACAGAACTTTAAGTGTTCAAGCCACCT	17	+	15654009-15654058	17qA2	Mus musculus TATA box binding protein (Tbp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [evidence TAS]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IDA]; The pronucleus originating from the spermatozoa that was involved in fertilization [goid 1940] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	SCA17; mTBP; TFIID; GTF2D1; Gtf2d	SCA17; mTBP; TFIID; GTF2D1; Gtf2d
Mus musculus	RefSeq	ILMN_216970	ILMN_216970	AW121567	NM_173446.2	NM_173446.2		270028	118129839	NM_173446.2	AW121567	NP_775622.1	ILMN_2677569	003830220	S	3014	CAGACAGATCTATCCTCTGCATCATGCTTAACCCTGCGACATGCGTACAG	8	-	9206088-9206137	8qA1.1	Mus musculus expressed sequence AW121567 (AW121567), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW121567; 6430500D16	AW121567; 6430500D16
Mus musculus	RefSeq	ILMN_185881	ILMN_185881	ZFP398	NM_173034.2	NM_173034.2		272347	142353529	NM_173034.2	Zfp398	NP_766622.1	ILMN_2430804	007160390	S	2460	AAGAGCCCAGAGACCCCAGGCACAACAGGGATCATCACATGGCCTAAAAA	6	+	47817668-47817717	6qB2.3	Mus musculus zinc finger protein 398 (Zfp398), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	5730513I23Rik; 6430539K21	5730513I23Rik; 6430539K21
Mus musculus	RefSeq	ILMN_209272	ILMN_243872	MITD1	NM_026913.2	NM_026913.2		69028	141802096	NM_026913.2	Mitd1	NP_081189.1	ILMN_1217646	002100193	S	607	GCCTGGAAGAAATAAAGCAGTCCCTCGGGAGTCACGGAGTGGTGCTGGAA	1	-	37937815-37937864	1qB	Mus musculus MIT, microtubule interacting and transport, domain containing 1 (Mitd1), mRNA. XM_978698	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1500032H18Rik	1500032H18Rik
Mus musculus	RefSeq	ILMN_209149	ILMN_209149	ST6GAL2	NM_172829.2	NM_172829.2		240119	142352074	NM_172829.2	St6gal2	NP_766417.1	ILMN_2593002	002100601	S	2051	GAGCCTCACCATATTGAAGGATGTGAGATTCTTACCACTCTGAGCGATGG	17	+	55638297-55638346	17qC	Mus musculus beta galactoside alpha 2,6 sialyltransferase 2 (St6gal2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways involving N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid [goid 6054] [evidence IC ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IDA]; Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-acetyl-beta-D-glucosamine = CMP + alpha-N-acetylneuraminyl-2,6-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosamine [goid 3835] [evidence ISA]	ST6Gal II; mKIAA1877; C230064G14Rik	ST6Gal II; mKIAA1877; C230064G14Rik
Mus musculus	Riken	ILMN_202762	ILMN_202762	CATNB	ri|5830416C23|PX00038P22|AK020013|2361					AK020013	Catnb		ILMN_1255869	002030553	S	2264	TGTTTCTGGCCCCTTTCCATAGGATGGCCTCATAGTTAAGGTGCTGTGCC										
Mus musculus	RefSeq	ILMN_185674	ILMN_238446	GPAM	NM_008149.3	NM_008149.3		14732	141802122	NM_008149.3	Gpam	NP_032175.2	ILMN_2655954	002470427	S	3624	CCTCTGTTGTAGTGGGTAGGTGCCTTTCTCATGAGCGGGGAGCATAACTG	19	-	55144378-55144427	19qD2	Mus musculus glycerol-3-phosphate acyltransferase, mitochondrial (Gpam), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sn-glycerol 3-phosphate = CoA + 1-acyl-sn-glycerol 3-phosphate [goid 4366] [evidence IDA]	GPAT1; GPAT	GPAT1; GPAT
Mus musculus	RefSeq	ILMN_213013	ILMN_213013	NEIL1	NM_028347.2	NM_028347.2		72774	118130491	NM_028347.2	Neil1	NP_082623.1	ILMN_2632630	003170246	S	757	TTTGCTGCCTTTCGAGCCTGGCTTCGGTGCTATGGTGTGCCAGGCATGAG	9	-	56992033-56992082	9qB	Mus musculus nei endonuclease VIII-like 1 (E. coli) (Neil1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IDA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [evidence IDA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of any N-glycosyl bond [goid 16799] [evidence IEA]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]	Nei1; 2810450N13Rik	Nei1; 2810450N13Rik
Mus musculus	RefSeq	ILMN_218672	ILMN_218672	HOXA3	NM_010452.2	NM_010452.2		15400	66955872	NM_010452.2	Hoxa3	NP_034582.1	ILMN_1237475	005310669	S	126	AAAAGATTCCCTGAGCACCTGGAACTGGAGACCATTCCTGGTTCAGATTT	6	-	52133720-52133769	6qB3	Mus musculus homeo box A3 (Hoxa3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ [goid 48645] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IGI]; The regionalization process by which information that determines the correct position at which organ primordia are formed is generated and perceived resulting in correct positioning of the new organ [goid 10159] [evidence IGI]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion [goid 21615] [evidence IMP]; The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion [goid 21615] [evidence IGI]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-1.5; Mo-10	Hox-1.5; Mo-10
Mus musculus	RefSeq	ILMN_218672	ILMN_218672	HOXA3	NM_010452.2	NM_010452.2		15400	66955872	NM_010452.2	Hoxa3	NP_034582.1	ILMN_1234863	005720347	S	1491	TGCCATGGACTACGGGGGCACTGGGCCGCTGGGCAGCGGACACCACCATG	6	-	52120039-52120088	6qB3	Mus musculus homeo box A3 (Hoxa3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ [goid 48645] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IGI]; The regionalization process by which information that determines the correct position at which organ primordia are formed is generated and perceived resulting in correct positioning of the new organ [goid 10159] [evidence IGI]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion [goid 21615] [evidence IMP]; The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion [goid 21615] [evidence IGI]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-1.5; Mo-10	Hox-1.5; Mo-10
Mus musculus	RefSeq	ILMN_210439	ILMN_218672	HOXA3	NM_010452.2	NM_010452.2		15400	66955872	NM_010452.2	Hoxa3	NP_034582.1	ILMN_1258410	003060605	S	2204	AAATAATATTTAAAACTTAGACTATTCAATGCTTGCAAAAAATATAAATA	6	-	52119326-52119375	6qB3	Mus musculus homeo box A3 (Hoxa3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ [goid 48645] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IGI]; The regionalization process by which information that determines the correct position at which organ primordia are formed is generated and perceived resulting in correct positioning of the new organ [goid 10159] [evidence IGI]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion [goid 21615] [evidence IMP]; The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion [goid 21615] [evidence IGI]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-1.5; Mo-10	Hox-1.5; Mo-10
Mus musculus	MEEBO	ILMN_221967	ILMN_221967	OLFR898	scl37098.1.424_224				22129138	NM_146871	Olfr898		ILMN_2742768	006510129	S	783	CTCCTTGCTTATGTCAAGCCATCATCTGCTGAGACTGTGGGTCAGGGGAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210532	ILMN_210532	ATIC	NM_026195.2	NM_026195.2		108147	141801830	NM_026195.2	Atic	NP_080471.1	ILMN_2606564	004830484	S	1524	GGGTGAAGAGAGCAGAGATCTCCAATGCGATTGATCAGTATGTGACCGGC	1	+	71623312-71623361	1qC3	Mus musculus 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase (Atic), mRNA.		The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate [goid 6188] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide [goid 3937] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide = tetrahydrofolate + 5'-phosphoribosyl-5-formamido-4-imidazolecarboxamide [goid 4643] [evidence IEA]	AA536954; AW212393; 2610509C24Rik	AA536954; AW212393; 2610509C24Rik
Mus musculus	MEEBO	ILMN_219684	ILMN_219684	1700014D04RIK	scl074224.1_24				51767715	XM_484266	1700014D04Rik		ILMN_2712169	001070059	S	2046	GATGATACTCAAGGCCAGGGAGCTGTTTGTTCGGTCAGGGTCTGATTCTA										
Mus musculus	RefSeq	ILMN_218769	ILMN_218769	GP9	NM_018762.1	NM_018762.1		54368	9055225	NM_018762.1	Gp9	NP_061232.1	ILMN_2842601	004280414	S	514	TAGTGGCTGTGGCTGTGCTGGGCCTGATTCTGCTGGCTGGTCTATTGAAC	6	+	87729459-87729508	6qD1	Mus musculus glycoprotein 9 (platelet) (Gp9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	GPIX; MGC130579; Cd42	GPIX; MGC130579; Cd42
Mus musculus	RefSeq	ILMN_216806	ILMN_216806	TAS2R115	NM_207020.1	NM_207020.1		353325	46309576	NM_207020.1	Tas2r115	NP_996903.1	ILMN_2675609	005270411	S	866	AGGACTTGCTTTCAGTACTGAAGTGGCTACAGTATTGGTGCAAGCGTGAG	6	-	132687089-132687138	6qG1	Mus musculus taste receptor, type 2, member 115 (Tas2r115), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	T2R15; Tas2r15; mGR15; mt2r49	T2R15; Tas2r15; mGR15; mt2r49
Mus musculus	RefSeq	ILMN_198234	ILMN_198234	LOC333744	XM_289803.2	XM_289803.2			38083108	XM_289803.2	LOC333744		ILMN_1225882	003400743	S	1129	ATTCCACTCCCATCGGGTGTTGGTGTGCCTGTGATTGGTGAGATCGATGG										
Mus musculus	RefSeq	ILMN_197217	ILMN_197217	LOC381361	XM_355327.1	XM_355327.1			38074634	XM_355327.1	LOC381361		ILMN_2527331	006380129	S	1068	CTCTGCTGAGGCCTTCCTCATGACCAGCGAGTGGGCAAAGAGCAACAAGG										
Mus musculus	Riken	ILMN_202820	ILMN_202820	9230101E03RIK	ri|9230101E03|PX00061N15|AK033744|1894					AK033744	9230101E03Rik		ILMN_1236619	000290184	S	1357	CAGAGGGTATCCTAATTCCAAGTGGCTTATCCCATTTGCAGCCCTGGTGC										
Mus musculus	RefSeq	ILMN_200965	ILMN_200965	LOC381925	XM_355946.1	XM_355946.1			38087446	XM_355946.1	LOC381925		ILMN_1215845	003450086	S	680	GAGGAGACGCTCTGGTCCTCCCGTTCGCTTGCTTGGAGCATTTAAGCGTG										
Mus musculus	RefSeq	ILMN_244624	ILMN_244624	MRPS5	NM_029963.2	NM_029963.2		77721	21914844	NM_029963.2	Mrps5	NP_084239.1	ILMN_2780177	004180195	S	1203	CCTGAGGTTCCTGATACCAAGCTGGACTGGCAGGACGTGAAGGCCATGCA	2	+	127429491-127429540	2qF1	Mus musculus mitochondrial ribosomal protein S5 (Mrps5), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	1620401I16Rik; AI850294	1620401I16Rik; AI850294
Mus musculus	RefSeq	ILMN_197512	ILMN_197512	LOC380914	XM_358462.1	XM_358462.1			38076370	XM_358462.1	LOC380914		ILMN_1259225	007160324	S	237	CCAAGCATGATGTCCGATGTCTGCTATAGTGGAAGGCTGTTCCAGCCGCC										
Mus musculus	RefSeq	ILMN_214846	ILMN_214846	SPIC	NM_011461.2	NM_011461.2		20728	26324128	NM_011461.2	Spic	NP_035591.2	ILMN_2652608	005670048	S	399	CGTACAGAACATAGCTGAAAGCCAGCTGGTACAACCCCCCTTCTTCCAGC	10	-	88140259-88140308	10qC1	Mus musculus Spi-C transcription factor (Spi-1/PU.1 related) (Spic), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Prf; Spi-C; AU019198; C76795	Prf; Spi-C; AU019198; C76795
Mus musculus	RefSeq	ILMN_214846	ILMN_214846	SPIC	NM_011461.2	NM_011461.2		20728	26324128	NM_011461.2	Spic	NP_035591.2	ILMN_2854004	001450086	S	783	CCCTCAGTATGGCCAACCTGATCAGGGCTACCTCAGTTTAAACCACTGGA	10	-	88138446-88138495	10qC1	Mus musculus Spi-C transcription factor (Spi-1/PU.1 related) (Spic), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Prf; Spi-C; AU019198; C76795	Prf; Spi-C; AU019198; C76795
Mus musculus	RefSeq	ILMN_192676	ILMN_192676	WDHD1	NM_172598.2	NM_172598.2		218973	40254223	NM_172598.2	Wdhd1	NP_766186.2	ILMN_1245448	004280338	S	3267	CTGCCAGCGATGGAGCTGAAGCAAAGAAGCGAAAGCGTGTGGTCAGCGAG	14	-	47861409-47861458	14qC1	Mus musculus WD repeat and HMG-box DNA binding protein 1 (Wdhd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AND-1; D630024B06Rik; A630092E18	AND-1; D630024B06Rik; A630092E18
Mus musculus	RefSeq	ILMN_200609	ILMN_200609	LOC384391	XM_357617.1	XM_357617.1			38084272	XM_357617.1	LOC384391		ILMN_2539360	005050215	S	278	ATGTGGCCAAAGTCAATACCGTGATGAAGCCCAATGGAGAGAAGAAGGCA										
Mus musculus	RefSeq	ILMN_214046	ILMN_233852	OLFR837	NM_146565.1	NM_146565.1		258558	22129516	NM_146565.1	Olfr837	NP_666776.1	ILMN_2643659	005860445	S	882	CAGGGATATGAAAGAAGCACTGAAGAAGGTAATTGGTAGAACAGTTTCTC	9	+	18942320-18942369	9qA2	Mus musculus olfactory receptor 837 (Olfr837), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR152-2	MOR152-2
Mus musculus	MEEBO	ILMN_215691	ILMN_215691	2310043I08RIK	scl24622.2.1_30	XM_131826.1			20850870	XM_131826.1	2310043I08Rik		ILMN_1241346	005690626	S	306	TGACGGGACAGTCATCCCAGTGGACAGTGATAGCCCCGCACACAGCACTG										
Mus musculus	RefSeq	ILMN_222841	ILMN_222841	AVPI1	NM_027106.1	NM_027106.1		69534	19526464	NM_027106.1	Avpi1	NP_081382.1	ILMN_2813186	003520093	S	492	ACAAGTGCTAGAGCCCCCCGGAACTGGAATAAGCCAGGCCCCACAGGTTA	19	-	42177020-42177069	19qC3	Mus musculus arginine vasopressin-induced 1 (Avpi1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	VIT32; esu; AA410041; 2310008N12Rik; mVIT32	VIT32; esu; AA410041; 2310008N12Rik; mVIT32
Mus musculus	MEEBO	ILMN_194850	ILMN_194850	GTPBP1	scl47740.13_198				7305116	NM_013818	Gtpbp1		ILMN_2510196	007000494	S	9	CTCCTTTCCCAATGTCACCCAACACAACCGCTACAGCCATGCCACATAGC								Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198698	ILMN_316101	LOC245676	XR_032431.1	XR_032431.1		245676	149272524	XR_032431.1	LOC245676		ILMN_1228611	001470142	S	204	ACCGAGCGGTGTAGGTTCCAAGACCTGGGGTCAATTCCAGATGAGGATCC	X	-	151585601-151585650	XqF3	PREDICTED: Mus musculus similar to ribosomal protein S20 (LOC245676), misc RNA.					
Mus musculus	Riken	ILMN_202704	ILMN_202704	MSCP-PENDING	ri|4930526G11|PX00034A17|AK019700|924					AK019700	Mscp-pending		ILMN_2551648	004250315	S	427	CGGACCTCTAGAAGAGGGATTCCTGGTGCAAGGAATGGCAGCTGCTTTTC										
Mus musculus	RefSeq	ILMN_202074	ILMN_240435	HEATR6	NM_145432.3	NM_145432.3		217026	126432548	NM_145432.3	Heatr6	NP_663407.2	ILMN_2546800	006060671	S	588	TTGATGAAATTGAGTGATTTATCTCACTCTGACCCTGAAGTCAGGAGAGC	11	+	83571824-83571873	11qC	Mus musculus HEAT repeat containing 6 (Heatr6), mRNA. XM_001004600 XM_001004601 XM_354634 XM_902903 XM_902906 XM_902915 XM_902919 XM_902921 XM_907748 XM_920525 XM_920537 XM_920567 XM_920586 XM_920593			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BB135312; BB249351; 2700008B19Rik; FLJ22087	BB135312; BB249351; 2700008B19Rik; FLJ22087
Mus musculus	MEEBO	ILMN_210131	ILMN_210131	LRMP	scl29369.20.1_111				34328141	NM_008511	Lrmp		ILMN_2602542	005340369	S	1978	ATGATGGACCACTGCCAGTGTGACTGACGTGCAGCTCAATGTACCCTTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]				
Mus musculus	RefSeq	ILMN_196389	ILMN_196389	2410030I24RIK	XM_138566.1	XM_138566.1			20893516	XM_138566.1	2410030I24Rik		ILMN_1233610	001850707	S	1032	CGAGACTCCATCAACCTTACATGACCAGAAGCGCTACATAAGAGGGAACG										
Mus musculus	RefSeq	ILMN_218888	ILMN_218888	NTNG2	NM_133501.1	NM_133501.1		171171	41281647	NM_133501.1	Ntng2	NP_598008.1	ILMN_2701486	006250020	S	1350	GGGCTACTATCGCAATGGCTCCGCAGAGCTGGATGATGAGAACGTCTGCA	2	-	29052504-29052553	2qB	Mus musculus netrin G2 (Ntng2), transcript variant b, mRNA.	Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]		Lmnt2; 2610016D08Rik	Lmnt2; 2610016D08Rik
Mus musculus	RefSeq	ILMN_218888	ILMN_218888	NTNG2	NM_133501.1	NM_133501.1		171171	41281647	NM_133501.1	Ntng2	NP_598008.1	ILMN_2701485	004900634	S	1348	TGGGCTACTATCGCAATGGCTCCGCAGAGCTGGATGATGAGAACGTCTGC	2	-	29052506-29052555	2qB	Mus musculus netrin G2 (Ntng2), transcript variant b, mRNA.	Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]		Lmnt2; 2610016D08Rik	Lmnt2; 2610016D08Rik
Mus musculus	RefSeq	ILMN_210241	ILMN_210241	COMMD2	NM_175095.4	NM_175095.4		52245	141802801	NM_175095.4	Commd2	NP_780304.2	ILMN_2731967	001010315	S	1853	GGACAGACGATGAACTAGGTTTCCCCACTCCCAATATTGAATGATTAGCC	3	-	57449329-57449378	3qD	Mus musculus COMM domain containing 2 (Commd2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HSPC042; D3Ertd176e; AI047739; 1190017G07Rik	HSPC042; D3Ertd176e; AI047739; 1190017G07Rik
Mus musculus	RefSeq	ILMN_210241	ILMN_210241	COMMD2	NM_175095.4	NM_175095.4		52245	141802801	NM_175095.4	Commd2	NP_780304.2	ILMN_1238741	004040324	S	1886	ATATTGAATGATTAGCCTGTGTCCTTCTAAGCAACCTTTCTTCCACCCCT	3	-	57449296-57449345	3qD	Mus musculus COMM domain containing 2 (Commd2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HSPC042; D3Ertd176e; AI047739; 1190017G07Rik	HSPC042; D3Ertd176e; AI047739; 1190017G07Rik
Mus musculus	RefSeq	ILMN_210241	ILMN_210241	COMMD2	NM_175095.4	NM_175095.4		52245	141802801	NM_175095.4	Commd2	NP_780304.2	ILMN_2642615	004640040	S	2190	TGGTGATGGGCCCTTTGGGGGCAAAGAAAGATTGTGAGTAATCCCCCTGC	3	-	57448992-57449041	3qD	Mus musculus COMM domain containing 2 (Commd2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HSPC042; D3Ertd176e; AI047739; 1190017G07Rik	HSPC042; D3Ertd176e; AI047739; 1190017G07Rik
Mus musculus	RefSeq	ILMN_194790	ILMN_243928	4833418A01RIK	NM_198005.1	NM_198005.1		75763	37574097	NM_198005.1	4833418A01Rik	NP_932122.1	ILMN_1219446	006980372	S	1336	CACCGTTACAGCTTCTGGACGTGTGGTGAAAAGAAATGTCAGCCTTCTGG	2	+	70925386-70925435	2qC2	Mus musculus RIKEN cDNA 4833418A01 gene (4833418A01Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A030004A10Rik; AI448937; 2810055O12Rik	A030004A10Rik; AI448937; 2810055O12Rik
Mus musculus	Riken	ILMN_201617	ILMN_201617	0710007C18RIK	ri|0710007C18|R000005G16|AK003009|947					AK003009	0710007C18Rik		ILMN_1252989	007560368	S	616	GTCTTCACAGATAGCACGGGGATACCTCAGAGTCTCACTAGAGCTTGCTC										
Mus musculus	RefSeq	ILMN_215468	ILMN_215468	OLFR1420	NM_146410.1	NM_146410.1		258405	33238899	NM_146410.1	Olfr1420	NP_666522.1	ILMN_2659916	006550553	S	560	GCCTGGCTTGTGGAGACACGCATGTTCATAGGACTGCCCTGTATATCATC	19	+	11971072-11971121	19qA	Mus musculus olfactory receptor 1420 (Olfr1420), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR266-4	MOR266-4
Mus musculus	RefSeq	ILMN_198298	ILMN_198298	LOC232577	XM_124833.3	XM_124833.3			38083721	XM_124833.3	LOC232577		ILMN_1216218	004810196	S	655	ATAACAGCTGCCAGGACCAGCAGGAACCAAGCTGCCAGCCGTCCCTCAAA										
Mus musculus	RefSeq	ILMN_212215	ILMN_212215	CLEC2E	NM_153506.3	NM_153506.3		232409	130488530	NM_153506.3	Clec2e	NP_705726.3	ILMN_2624092	004670707	S	594	GGGGGATCTACAACAGCAGTGGGGATATACATAAAAAATGGATTTGTAAC	6	-	129043474-129043523	6qF3	Mus musculus C-type lectin domain family 2, member e (Clec2e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Clra	Clra
Mus musculus	Riken	ILMN_206100	ILMN_206100	1110025H03RIK	ri|1110025H03|ZA00008C23|AK027936|374					AK027936	1110025H03Rik		ILMN_2577549	005810161	S	188	CTGTCTTGGAGCTCACAGAGATCCGCCAACTCTGCCGACCCCTACTTAAC										
Mus musculus	RefSeq	ILMN_217911	ILMN_217911	CEP78	NM_198019.2	NM_198019.2		208518	48976075	NM_198019.2	Cep78	NP_932136.2	ILMN_1241270	000730739	S	2447	CAGGAACGTGTCCATTCGTCAGCACACCTAACCTGACATAGGTCTAACCT	19	-	16030315-16030329:16030330-16030364	19qA	Mus musculus centrosomal protein 78 (Cep78), mRNA.				D030027P05; 5730599I05Rik	D030027P05; 5730599I05Rik
Mus musculus	RefSeq	ILMN_210930	ILMN_225648	1700030G11RIK	XM_913826.3	XM_913826.3		70065	149250424	XM_913826.3	1700030G11Rik	XP_918919.3	ILMN_2676860	001090553	S	346	TGGCATTACGATGGTTGGACGGAACTGGTTTTGGCCGCCGTGGAAGGGGA				2qH4	PREDICTED: Mus musculus RIKEN cDNA 1700030G11 gene (1700030G11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210930	ILMN_225648	1700030G11RIK	XM_913826.3	XM_913826.3		70065	149250424	XM_913826.3	1700030G11Rik	XP_918919.3	ILMN_2610714	004010543	S	669	TGGTGCCTCCATCCATGACAGAGACTTGAAGAGCGACACGCCCATCACCA				2qH4	PREDICTED: Mus musculus RIKEN cDNA 1700030G11 gene (1700030G11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212124	ILMN_247134	OLFR784	NM_146729.1	NM_146729.1		258724	22129384	NM_146729.1	Olfr784	NP_666940.1	ILMN_2623022	001090019	S	601	GCTGTCATGACACTTATCATCACCTTGATTTTAGTGATCCTCTCCTACAC	10	+	128825291-128825340	10qD3	Mus musculus olfactory receptor 784 (Olfr784), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR110-3	MOR110-3
Mus musculus	RefSeq	ILMN_191903	ILMN_323039	MAGI2	NM_015823.2	NM_015823.2		50791	153792115	NM_015823.2	Magi2	NP_056638.1	ILMN_1238370	007100390	S	3433	GCCTCTCCATGTGCATGAAAAGTGACAAGCATGGGTCCCCATATTTCTAC				5qA3	Mus musculus membrane associated guanylate kinase, WW and PDZ domain containing 2 (Magi2), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IPI]	Acvrip1; mKIAA0705; Acvrinp1; Magi-2; S-SCAM; Acvri1	Acvrip1; mKIAA0705; Acvrinp1; Magi-2; S-SCAM; Acvri1
Mus musculus	RefSeq	ILMN_224017	ILMN_247007	CEACAM14	NM_025957.4	NM_025957.4		67084	146134894	NM_025957.4	Ceacam14	NP_080233.1	ILMN_2773246	004010014	S	776	GTCACAAAGAATGACACAGGGCTTTACACCCTACGAACCATATCTGTTGA				7qA2	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 14 (Ceacam14), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1600025E09Rik; 1600021E03Rik; AV033953	1600025E09Rik; 1600021E03Rik; AV033953
Mus musculus	MEEBO	ILMN_195741	ILMN_195741	SLC17A2	scl44987.9_12				21450226	NM_144836	Slc17a2		ILMN_2595395	000020382	S	1500	TCTCACCCGCCTCTGAGGATGTAGGGTTGGAGACCAACCAAAGTGCTGAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195741	ILMN_195741	SLC17A2	scl44987.9_12				21450226	NM_144836	Slc17a2		ILMN_1236971	005130132	S	11	GAGCTCTCAAAGAATGATTGTAGTCTGGGAGTTAAATTGAGAGAGGGAAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212394	ILMN_212394	VSTM2A	NM_145967.1	NM_145967.1		211739	22122404	NM_145967.1	Vstm2a	NP_666079.1	ILMN_2973467	002650523	S	3081	TTTACAGCAAGCCAAATGTGTACCCGTATCAGTAATGTTCACCATGCTTG	11	+	16184054-16184103	11qA2	Mus musculus V-set and transmembrane domain containing 2A (Vstm2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			BC027127; MGC38877; 9330184N17Rik; RP23-188C13.2	BC027127; MGC38877; 9330184N17Rik; RP23-188C13.2
Mus musculus	RefSeq	ILMN_212394	ILMN_212394	VSTM2A	NM_145967.1	NM_145967.1		211739	22122404	NM_145967.1	Vstm2a	NP_666079.1	ILMN_2725902	004920328	S	615	TGCAGGGTGACTGACGCTAACTACGGGGAGCTTCAGGAACACAAGGCCCA	11	+	16162998-16163047	11qA2	Mus musculus V-set and transmembrane domain containing 2A (Vstm2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			BC027127; MGC38877; 9330184N17Rik; RP23-188C13.2	BC027127; MGC38877; 9330184N17Rik; RP23-188C13.2
Mus musculus	RefSeq	ILMN_212394	ILMN_212394	VSTM2A	NM_145967.1	NM_145967.1		211739	22122404	NM_145967.1	Vstm2a	NP_666079.1	ILMN_2625913	006590477	S	3085	CAGCAAGCCAAATGTGTACCCGTATCAGTAATGTTCACCATGCTTGTAAT	11	+	16184058-16184107	11qA2	Mus musculus V-set and transmembrane domain containing 2A (Vstm2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			BC027127; MGC38877; 9330184N17Rik; RP23-188C13.2	BC027127; MGC38877; 9330184N17Rik; RP23-188C13.2
Mus musculus	RefSeq	ILMN_220082	ILMN_220082	FBXO36	NM_025386.2	NM_025386.2		66153	142371227	NM_025386.2	Fbxo36	NP_079662.1	ILMN_2717387	003400091	S	585	GAGAAGCTTGCTTAGGGGATGGCTGTTTCCAACAGCGGAGCCACAGTGGT	1	+	84896761-84896810	1qC5	Mus musculus F-box protein 36 (Fbxo36), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		0610008D19Rik; D1Ertd757e; 1110020F21Rik; 2410002G19Rik	0610008D19Rik; D1Ertd757e; 1110020F21Rik; 2410002G19Rik
Mus musculus	RefSeq	ILMN_197388	ILMN_197388	LOC380884	XM_354793.1	XM_354793.1			38075525	XM_354793.1	LOC380884		ILMN_1242819	005290288	S	849	GCCTCTCCATATGCAGGTGCTGGGAATTCCGTCCTTTTGGTCAGCAACCT										
Mus musculus	Riken	ILMN_204994	ILMN_204994	9330161M17RIK	ri|9330161M17|PX00106A04|AK034182|2169					AK034182	9330161M17Rik		ILMN_1238231	004150706	S	1842	GGGACCGTCTCTAAGGAGGGCAAATTCTGTGTCCCCACCATCACCATCTC										
Mus musculus	RefSeq	ILMN_211335	ILMN_211335	TIMP3	NM_011595.2	NM_011595.2		21859	119637812	NM_011595.2	Timp3	NP_035725.1	ILMN_2741096	001400309	S	4409	GGGACAGGGGTACCTTAGATTCTCTGTCTATTTTTCCTCTAGCAAGCCAG	10	+	85811978-85812027	10qC1	Mus musculus tissue inhibitor of metalloproteinase 3 (Timp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Timp-3	Timp-3
Mus musculus	RefSeq	ILMN_211335	ILMN_211335	TIMP3	NM_011595.2	NM_011595.2		21859	119637812	NM_011595.2	Timp3	NP_035725.1	ILMN_2614759	006660427	S	1804	AGGCAACCTGCCCGTCTGTACAAAAAACTCAAAGGGCTGAGATGAACGTC	10	+	85809373-85809422	10qC1	Mus musculus tissue inhibitor of metalloproteinase 3 (Timp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Timp-3	Timp-3
Mus musculus	RefSeq	ILMN_206443	ILMN_211335	TIMP3	NM_011595.2	NM_011595.2		21859	119637812	NM_011595.2	Timp3	NP_035725.1	ILMN_1232928	006940221	S	3319	GCCGACTGGGGCCATTGGTTCTGCCCATTGGTTTTATCTTCAGGTGCCTC	10	+	85810888-85810937	10qC1	Mus musculus tissue inhibitor of metalloproteinase 3 (Timp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]	Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Timp-3	Timp-3
Mus musculus	MEEBO	ILMN_185322	ILMN_185322	A930004K21RIK	scl18755.20_323				51036626	NM_172673	A930004K21Rik		ILMN_1230834	000110026	S	1880	CCGGGAACATTCAGTTTCTTCAGAGGCTCTTCCGAGAAAGGCTCAGCAAC										
Mus musculus	RefSeq	ILMN_214570	ILMN_251191	SAMD14	NM_146025.2	NM_146025.2		217125	118130977	NM_146025.2	Samd14	NP_666137.1	ILMN_1235581	003130382	S	126	TTCCCTACCGTTCTTTGTCTCCCGGGCGCTCGGCCTCCCCATAAGCGTAT	11	+	94871318-94871367	11qD	Mus musculus sterile alpha motif domain containing 14 (Samd14), transcript variant 1, mRNA.				RP23-112C19.4; AI839049; AI854782; MGC31049; BC034054	RP23-112C19.4; AI839049; AI854782; MGC31049; BC034054
Mus musculus	RefSeq	ILMN_214570	ILMN_251191	SAMD14	NM_146025.2	NM_146025.2		217125	118130977	NM_146025.2	Samd14	NP_666137.1	ILMN_1240598	002810575	S	3245	CCAAGTGTGCCCACCTGCATGTGAAGGGGGAAGATGGCTATCAACTTCTT	11	+	94887328-94887377	11qD	Mus musculus sterile alpha motif domain containing 14 (Samd14), transcript variant 1, mRNA.				RP23-112C19.4; AI839049; AI854782; MGC31049; BC034054	RP23-112C19.4; AI839049; AI854782; MGC31049; BC034054
Mus musculus	RefSeq	ILMN_258406	ILMN_258406	1700065O13RIK	NM_028543.1	NM_028543.1		73451	58037330	NM_028543.1	1700065O13Rik	NP_082819.1	ILMN_2845839	004150482	S	3319	TGCTTGGCTGGCCTAGAGCTTACATAGTTCCTGCCTTTGCCTCCAAAGAG	17	-	32755298-32755347	17qB1	Mus musculus RIKEN cDNA 1700065O13 gene (1700065O13Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI839635	AI839635
Mus musculus	MEEBO	ILMN_213744	ILMN_213744	P2RY12	scl22118.5_93				31980658	NM_027571	P2ry12		ILMN_2771753	003710292	S	1921	GGCCTGGATTATTGTAAATGCACATTAAGATGGTAGAGGTTTAAAAAGCG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 43270] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IMP];  [goid 1621] [evidence IMP]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	Riken	ILMN_206652	ILMN_206652	ITGAV	ri|A630065O05|PX00316H09|AK080357|1681					AK080357	Itgav		ILMN_1234725	006620739	S	1319	GCCTGCGTGTCTGTTGGTTGCTCCAATGAAAGTCACACCCAGGTGATGTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte [goid 43277] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_238421	ILMN_238421	4930481F22RIK	NM_029139.1	NM_029139.1		668110	114326486	NM_029139.1	4930481F22Rik	NP_083415.1	ILMN_3143842	004480091	A	705	TGGAGGAATTGGAGGGGCAGTCCCAGCGCAGCCCAGAAGCTCAGAATGAT	8	+	116179010-116179058:116179059-116179059	8qE1	Mus musculus RIKEN cDNA 4930481F22 gene (4930481F22Rik), transcript variant 2, mRNA. XM_001004671 XM_001004675 XM_917147 XM_924718		Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]		MMRP; PSESS	MMRP; PSESS
Mus musculus	RefSeq	ILMN_238421	ILMN_238421	4930481F22RIK	NM_029139.1	NM_029139.1		668110	114326486	NM_029139.1	4930481F22Rik	NP_083415.1	ILMN_3065871	006060692	I	402	GTGTACAGTCCAGTTCTCAGGATTCAGACCAAAGAAGCTGGGGTTGCTTC	8	+	116177679-116177728	8qE1	Mus musculus RIKEN cDNA 4930481F22 gene (4930481F22Rik), transcript variant 2, mRNA. XM_001004671 XM_001004675 XM_917147 XM_924718		Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]		MMRP; PSESS	MMRP; PSESS
Mus musculus	RefSeq	ILMN_249563	ILMN_249563	OLFR329	NM_001011531.1	NM_001011531.1		259148	58372141	NM_001011531.1	Olfr329	NP_001011531.1	ILMN_2954467	000630243	S	885	CACAGAAGCTATGAAGAAACTGTTGGGTGAAAACCCCTCTTTCCAGAAAC	11	-	58356024-58356073	11qB1.3	Mus musculus olfactory receptor 329 (Olfr329), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR275-6P	MOR275-6P
Mus musculus	RefSeq	ILMN_200995	ILMN_235645	LOC672604	XR_003913.1	XR_003913.1		672604	94382612	XR_003913.1	LOC672604		ILMN_1251826	007160427	S	478	GCCCTCAGCAGATGTCACCATACCCTGCAAAATCCCTGGCTGGACCTCAA					PREDICTED: Mus musculus similar to olfactory receptor 688 (LOC672604), mRNA.					
Mus musculus	RefSeq	ILMN_193428	ILMN_193428	MED4	NM_026119.3	NM_026119.3		67381	118129849	NM_026119.3	Med4	NP_080395.1	ILMN_2497094	003710187	S	896	AGGAGCCCATGAAAATCAGCGGGTTTTCTTCCTAGAGCCCGAGCCCCTGG	14	+	73917944-73917993	14qD3	Mus musculus mediator of RNA polymerase II transcription, subunit 4 homolog (yeast) (Med4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HSPC126; 2410046H15Rik; TRAP36; Vdirp; DRIP36; Vdrip	HSPC126; 2410046H15Rik; TRAP36; Vdirp; DRIP36; Vdrip
Mus musculus	MEEBO	ILMN_218959	ILMN_218959	BTBD6	scl0399566.4_97				42517137	NM_201646	Btbd6		ILMN_2774822	006060370	S	1782	TTCTCTATCAGCCAGAGTCTGAAACTTGACTTCTCACAGCCCGTGTCCGC								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184409	ILMN_184409	MJ-5000-153_4699	MJ-5000-153_4699						MJ-5000-153_4699		ILMN_2418393	001940376	S	1	GGAAAAGAACTTGGAGGAAGTGGAGGAGGGCATAGTGAGGCTGGTGGACT										
Mus musculus	RefSeq	ILMN_221265	ILMN_221265	ALDH2	NM_009656.3	NM_009656.3		11669	142371450	NM_009656.3	Aldh2	NP_033786.1	ILMN_2733179	002340349	S	2112	CGTCCAGATGTGCAGGATGCTGCCTTCAACCTGCAGTCCCTAAGCAGCAA	5	-	122017741-122017790	5qF	Mus musculus aldehyde dehydrogenase 2, mitochondrial (Aldh2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]	Ahd5; Ahd-5	Ahd5; Ahd-5
Mus musculus	RefSeq	ILMN_200119	ILMN_200119	LOC384223	XM_357500.1	XM_357500.1			38080486	XM_357500.1	LOC384223		ILMN_1224020	007650743	S	575	CTGATGAATGCAGGCAAGTTTGGGAGCAGGCTAGAATGCATGCAGACGAG										
Mus musculus	MEEBO	ILMN_192799	ILMN_192799	STCH	scl48300.6_12				30089676	NM_030201	Stch		ILMN_2491439	006420528	S	5	TTTGGACAAATATTGTTTTCTATCTTAAGAAATCCATTTTATGATGTCTT										
Mus musculus	RefSeq	ILMN_186041	ILMN_311568	LOC100046855	XM_001476916.1	XM_001476916.1		100046855	149253724	XM_001476916.1	LOC100046855	XP_001476966.1	ILMN_2432110	000580465	S	4518	CCTGTTATGTACCTAGTGTTAGAGGGTCAGAATAATCTTTCTGCTTGGCA					PREDICTED: Mus musculus similar to BKLF (LOC100046855), mRNA.					
Mus musculus	RefSeq	ILMN_237208	ILMN_237208	CASZ1	NM_027195.1	NM_027195.1		69743	124377979	NM_027195.1	Casz1	NP_081471.1	ILMN_2938507	003190347	S	4022	GATGAGGGCGCAAGCGACCTTACCCCCAGTGATCCGTTGGGATCCTTCAA	4	+	148318874-148318923	4qE2	Mus musculus castor homolog 1, zinc finger (Drosophila) (Casz1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AV096627; MGC31683; Cst; D4Ertd432e; BC040081; 2410019P08Rik	AV096627; MGC31683; Cst; D4Ertd432e; BC040081; 2410019P08Rik
Mus musculus	RefSeq	ILMN_215913	ILMN_237208	CASZ1	NM_027195.1	NM_027195.1		69743	124377979	NM_027195.1	Casz1	NP_081471.1	ILMN_2665095	004730440	S	4259	GGGTGGAAGGAACCTTCTTCACTTAATGGTGGTGGCTTCTTGCGGCGAGA	4	+	148319111-148319160	4qE2	Mus musculus castor homolog 1, zinc finger (Drosophila) (Casz1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AV096627; MGC31683; Cst; D4Ertd432e; BC040081; 2410019P08Rik	AV096627; MGC31683; Cst; D4Ertd432e; BC040081; 2410019P08Rik
Mus musculus	RefSeq	ILMN_208819	ILMN_208819	KCTD20	NM_025888.5	NM_025888.5		66989	146134949	NM_025888.5	Kctd20	NP_080164.2	ILMN_2740646	003830164	S	2119	TCAGGCTTACACGTGTGGTAGACGGCAGCCCAGATCATTCCCTAGCTCCT				17qA3.3	Mus musculus potassium channel tetramerisation domain containing 20 (Kctd20), mRNA. XM_923925 XM_923928 XM_923933	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	AI451943; D17Ertd562e; 2410004N11Rik; AW541186	AI451943; D17Ertd562e; 2410004N11Rik; AW541186
Mus musculus	RefSeq	ILMN_220144	ILMN_208819	KCTD20	NM_025888.5	NM_025888.5		66989	146134949	NM_025888.5	Kctd20	NP_080164.2	ILMN_1248360	002750561	S	244	GGCAGCAGCTTGGTGTCCTCTGGTCTGCATAGTGTCACTTATCCCCTAGC				17qA3.3	Mus musculus potassium channel tetramerisation domain containing 20 (Kctd20), mRNA. XM_923925 XM_923928 XM_923933	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	AI451943; D17Ertd562e; 2410004N11Rik; AW541186	AI451943; D17Ertd562e; 2410004N11Rik; AW541186
Mus musculus	RefSeq	ILMN_208819	ILMN_208819	KCTD20	NM_025888.5	NM_025888.5		66989	146134949	NM_025888.5	Kctd20	NP_080164.2	ILMN_2589838	004180500	S	2326	CTTGAAGGCTGCTCCCATAAGACCATGTATAGCATAACTACTTGATGGCA				17qA3.3	Mus musculus potassium channel tetramerisation domain containing 20 (Kctd20), mRNA. XM_923925 XM_923928 XM_923933	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	AI451943; D17Ertd562e; 2410004N11Rik; AW541186	AI451943; D17Ertd562e; 2410004N11Rik; AW541186
Mus musculus	RefSeq	ILMN_218215	ILMN_218215	MILL1	NM_153749.3	NM_153749.3		266815	142360553	NM_153749.3	Mill1	NP_715630.2	ILMN_1219038	002710161	S	1745	CAGGGGCAAAGAAGCAGGCTAGACATCCACAACAAAGTACGAGTTGTGGC	7	+	18850697-18850746	7qA2	Mus musculus MHC I like leukocyte 1 (Mill1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC129328; 5530400I18Rik; MGC129329	MGC129328; 5530400I18Rik; MGC129329
Mus musculus	RefSeq	ILMN_195816	ILMN_226800	HOXA7	NM_010455.2	NM_010455.2		15404	118130010	NM_010455.2	Hoxa7	NP_034585.1	ILMN_2621038	005720112	S	1866	GGCACAGGACCCTGGCTGCACAGGACAGTTGGAAAAGCGTCTTTAAGAGA	6	-	52165658-52165707	6qB3	Mus musculus homeo box A7 (Hoxa7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of keratinocyte differentiation [goid 45617] [evidence ISO]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	AV118143; Hox-1.1	AV118143; Hox-1.1
Mus musculus	Riken	ILMN_205140	ILMN_205140	BAZ1B	ri|9630042I17|PX00116M10|AK036160|4286					AK036160	Baz1b		ILMN_1246235	004230280	S	3795	GCCTTTAATCCTAGCACTTGGATCACAGACCGGCAGATCTCTGTTCGAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IDA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_203704	ILMN_203704	9630013A09RIK	ri|9630013A09|PX00115M01|AK035873|3767					AK035873	9630013A09Rik		ILMN_1249160	001940324	S	3223	GTGGCTGGCTGTGCGGCAGGCTACACTGGAGAACAAGAGAAACAAAACCC										
Mus musculus	MEEBO	ILMN_192516	ILMN_192516	4930451E13RIK	scl40608.3_4				51766586	XM_109751	4930451E13Rik		ILMN_2488797	007210253	S	2	TCACACATAGAAAACAAAATAGAAACCCCTGAAAATACAAGAAGAAATAT										
Mus musculus	RefSeq	ILMN_210888	ILMN_257546	GPR1	NM_146250.1	NM_146250.1		241070	22122832	NM_146250.1	Gpr1	NP_666362.1	ILMN_1249644	001580369	S	1080	CTCAACTGGCTTAGCCTTCCTCAATAGCTGCTTGAATCCCATCCTTTACG	1	-	63229741-63229790	1qC2	Mus musculus G protein-coupled receptor 1 (Gpr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC41704	MGC41704
Mus musculus	RefSeq	ILMN_257546	ILMN_257546	GPR1	NM_146250.1	NM_146250.1		241070	22122832	NM_146250.1	Gpr1	NP_666362.1	ILMN_2967037	004150324	S	1443	CATGTATCTTTCTGGCTGCCCTCTGGTGGCCGTTCTGATACTGACAGCCT	1	-	63229378-63229427	1qC2	Mus musculus G protein-coupled receptor 1 (Gpr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC41704	MGC41704
Mus musculus	RefSeq	ILMN_209290	ILMN_209290	SLC25A24	NM_172685.3	NM_172685.3		229731	146198678	NM_172685.3	Slc25a24	NP_766273.1	ILMN_2709504	007510465	S	126	TACGAAACGCTCTTCCGGGCGCTGGACCGCAATGGGGACGGCGTGGTGGA				3qF3	Mus musculus solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 (Slc25a24), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2610016M12Rik	2610016M12Rik
Mus musculus	RefSeq	ILMN_209290	ILMN_209290	SLC25A24	NM_172685.3	NM_172685.3		229731	146198678	NM_172685.3	Slc25a24	NP_766273.1	ILMN_1213947	000840403	S	3065	TTTTGTACTATATAAAGAAAGGAGGGGACTCTGCTTCATCTTCGGGGTTA				3qF3	Mus musculus solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24 (Slc25a24), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2610016M12Rik	2610016M12Rik
Mus musculus	RefSeq	ILMN_222391	ILMN_316005	LOC100045966	XR_032149.1	XR_032149.1		100045966	149269978	XR_032149.1	LOC100045966		ILMN_1235004	004640110	S	2496	CCCCGGTCTACCTCCATGTCCTGGATCTGCAGAACCATCTGTTTCTTTGG					PREDICTED: Mus musculus similar to protocadherin alpha 8 (LOC100045966), misc RNA.					
Mus musculus	RefSeq	ILMN_220147	ILMN_220147	KLHL26	NM_178771.3	NM_178771.3		234378	142383777	NM_178771.3	Klhl26	NP_848886.1	ILMN_2718208	004880133	S	298	TGCGTGAGGCCAACCAGGCTGTCATCCAGCTGCAGGGTGTGTCTGCACGT	8	-	72976848-72976897	8qB3.3	Mus musculus kelch-like 26 (Drosophila) (Klhl26), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC38024; C630013N10Rik; Klkl26	MGC38024; C630013N10Rik; Klkl26
Mus musculus	RefSeq	ILMN_198143	ILMN_254054	GM749	NM_001034871.1	NM_001034871.1		328788	85702210	NM_001034871.1	Gm749	NP_001030043.1	ILMN_1214910	006280538	S	159	AGTGACTGTTGCCTCATAGACCTGGAGAGAAGCGGAGCCTTCTGCACCCC	17	+	28686470-28686519	17qA3.3	Mus musculus gene model 749, (NCBI) (Gm749), mRNA.					
Mus musculus	RefSeq	ILMN_254054	ILMN_254054	GM749	NM_001034871.1	NM_001034871.1		328788	85702210	NM_001034871.1	Gm749	NP_001030043.1	ILMN_2869966	002510014	S	163	ACTGTTGCCTCATAGACCTGGAGAGAAGCGGAGCCTTCTGCACCCCCAAG	17	+	28686474-28686523	17qA3.3	Mus musculus gene model 749, (NCBI) (Gm749), mRNA.					
Mus musculus	RefSeq	ILMN_210104	ILMN_210104	CHFR	NM_172717.1	NM_172717.1		231600	27370049	NM_172717.1	Chfr	NP_766305.1	ILMN_2985111	001170327	S	3051	GTTGTCTTGCTCTTGATACAGACTGAGAGGCAGTACTCTGTGTTTGTGGG	5	+	110412179-110412228	5qF	Mus musculus checkpoint with forkhead and ring finger domains (Chfr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IMP]	RNF116; C230082M18; 5730484M20Rik	RNF116; C230082M18; 5730484M20Rik
Mus musculus	RefSeq	ILMN_220104	ILMN_220104	TMEM106A	NM_144830.3	NM_144830.3		217203	141803040	NM_144830.3	Tmem106a	NP_659079.1	ILMN_1238346	000430358	S	1037	GGAAAGACTGTAGGGACTTTGTTGAAGGAAAAGTCCTGCTTTGGGCCCTG	11	+	101451835-101451884	11qD	Mus musculus transmembrane protein 106A (Tmem106a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC37887; 0610008L10Rik; BC022145; RP23-382C19.2; MGC30290; AI043106	MGC37887; 0610008L10Rik; BC022145; RP23-382C19.2; MGC30290; AI043106
Mus musculus	RefSeq	ILMN_221600	ILMN_221600	0610008C08RIK	NM_026673.2	NM_026673.2		68316	142368551	NM_026673.2	0610008C08Rik	NP_080949.1	ILMN_2737647	002630593	S	279	CGTGCCCACCTCCTCGGCTAATGCCCTTTTGGGGTTGTGGGGAGGATGAA	X	+	91612771-91612789:91612790-91612820	XqC3	Mus musculus RIKEN cDNA 0610008C08 gene (0610008C08Rik), mRNA.				RP23-272D10.2; MGC130105; MGC130106; 1110019O03Rik	RP23-272D10.2; MGC130105; MGC130106; 1110019O03Rik
Mus musculus	RefSeq	ILMN_188939	ILMN_224730	RBM31Y	XM_486938.3	XM_486938.3		74484	94409738	XM_486938.3	Rbm31y	XP_486938.1	ILMN_1244760	007330433	S	1582	GGTTTCCAAGACTCTAATGGTGATTATTTCGTCCTCTATAGTTATGGGGC	Y|NT_161902.3	-	397904-397953		PREDICTED: Mus musculus RNA binding motif 31, Y-linked (Rbm31y), mRNA.					
Mus musculus	RefSeq	ILMN_215795	ILMN_215795	DMAP1	NM_023178.2	NM_023178.2		66233	31981291	NM_023178.2	Dmap1	NP_075667.1	ILMN_2663674	004180392	S	1349	ACCCCACCAAGGATACCATCATTGATGTCGTGGGTGCACCCCTCACACCC	4	-	117347631-117347680	4qD2.1	Mus musculus DNA methyltransferase 1-associated protein 1 (Dmap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	DNMTAP1; mKIAA1425; DNMAP1; 1500016M21Rik; Dmtap1	DNMTAP1; mKIAA1425; DNMAP1; 1500016M21Rik; Dmtap1
Mus musculus	RefSeq	ILMN_210391	ILMN_210391	C1QTNF4	NM_026161.3	NM_026161.3		67445	147903608	NM_026161.3	C1qtnf4	NP_080437.2	ILMN_1252584	005670039	S	926	AAGCTGCCGCGCAAGACGCTGTCGGTGAAGCTGATGAAGAACCGCGACGA				2qE1	Mus musculus C1q and tumor necrosis factor related protein 4 (C1qtnf4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CTRP4; 0710001E10Rik; 9430004J15Rik	CTRP4; 0710001E10Rik; 9430004J15Rik
Mus musculus	RefSeq	ILMN_200293	ILMN_200293	LOC386155	XM_359096.1	XM_359096.1			38081242	XM_359096.1	LOC386155		ILMN_1251560	003120066	S	1011	GGACACAATGAGAAGACCAAACCTACGGATAAAAGGAGCAAAAGACACCG										
Mus musculus	RefSeq	ILMN_230400	ILMN_230400	OLFR1229	NM_001011761.1	NM_001011761.1		257921	58801309	NM_001011761.1	Olfr1229	NP_001011761.1	ILMN_2913720	001450228	S	423	TACTCTAGTGGGAGTGGCCTGGACAGGAGGATTCTTACACTCTATCATCC	2	-	89122816-89122865	2qE1	Mus musculus olfactory receptor 1229 (Olfr1229), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR233-22; MOR233-19	MOR233-22; MOR233-19
Mus musculus	MEEBO	ILMN_192188	ILMN_192188	ZBTB10	scl0229055.1_167	NM_177660.2			31343574	NM_177660.2	Zbtb10		ILMN_2485794	000110209	S	11	AATCTGCTTTATTAGACAGTAGTTCACTGTTGCGTAGAAACTGGACGTGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_210152	ILMN_210152	OPRK1	NM_011011.1	NM_011011.1		18387	24111247	NM_011011.1	Oprk1	NP_035141.1	ILMN_1226095	007000551	S	1199	GCGGTGTTTTAGGGACTTCTGCTTCCCTATTAAGATGCGAATGGAGCGCC	1	+	5592736-5592785	1qA1	Mus musculus opioid receptor, kappa 1 (Oprk1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an opioid, any narcotic derived from or resembling opium, to initiate a change in cell activity [goid 4985] [evidence IEA];  [goid 4987] [evidence TAS]	KOR-1; R21; KOR; MGC151172; Oprk2	KOR-1; R21; KOR; MGC151172; Oprk2
Mus musculus	RefSeq	ILMN_218916	ILMN_322444	4930433N12RIK	XR_035187.1	XR_035187.1		114673	149259436	XR_035187.1	4930433N12Rik		ILMN_2701920	003190554	S	943	CACCCAGAACCCTTTGATGTGCAAAAAGATTATAAGCGGCAACTTGGGGA	9	-	3134929-3134978	9qA1	PREDICTED: Mus musculus RIKEN cDNA 4930433N12 gene (4930433N12Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_197148	ILMN_252989	AA619741	XM_984675.2	XM_984675.2		241051	149233745	XM_984675.2	AA619741	XP_989769.2	ILMN_1220435	004890008	S	771	CGAGCTGGATAAGCACTTCGCCTCAGACAATGCAGAAGGAGCTGCGGGCC				1qB	PREDICTED: Mus musculus expressed sequence AA619741 (AA619741), mRNA.					
Mus musculus	Riken	ILMN_201824	ILMN_201824	2610312E17RIK	ri|2610312E17|ZX00062G17|AK012014|1096					AK012014	2610312E17Rik		ILMN_2544868	003840327	S	975	GCTGCTTCCATTGGTCCTTAGCTGGGGCAGTACTCTAACTTGGCTTTCCC										
Mus musculus	RefSeq	ILMN_197469	ILMN_197469	LOC219001	XM_139016.2	XM_139016.2			38076114	XM_139016.2	LOC219001		ILMN_1231422	006280743	S	1960	TGGTCCATCAGCCCAGCAAATAGAACTGCCTCCTCTAGGCCTGGAACAGC										
Mus musculus	MEEBO	ILMN_220781	ILMN_220781	2410018G20RIK	scl48728.3.1_20	XM_148413.1			20891858	XM_148413.1	2410018G20Rik		ILMN_2726772	006940048	S	922	CTATCCACCTTCACTCCTCAAACCCTTCTGAGGAGCTGAATGTCTGTAGC										
Mus musculus	RefSeq	ILMN_208781	ILMN_208781	PRKRIP1	NM_025774.1	NM_025774.1		66801	13385243	NM_025774.1	Prkrip1	NP_080050.1	ILMN_2851889	007050753	S	738	CCTGCCTGGGGAGCAGAGGGAGCGACCTTAGACATTTGCAGATTGCATTC	5	-	136465850-136465899	5qG2	Mus musculus Prkr interacting protein 1 (IL11 inducible) (Prkrip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]	C114; 8430424D23Rik	C114; 8430424D23Rik
Mus musculus	RefSeq	ILMN_208781	ILMN_208781	PRKRIP1	NM_025774.1	NM_025774.1		66801	13385243	NM_025774.1	Prkrip1	NP_080050.1	ILMN_2851888	006350309	S	671	ATGGCTGTGTGTGACCAGCTGCTAGACTGGCTGTGTTGGGAGAAGGCAGG	5	-	136465917-136465966	5qG2	Mus musculus Prkr interacting protein 1 (IL11 inducible) (Prkrip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]	C114; 8430424D23Rik	C114; 8430424D23Rik
Mus musculus	RefSeq	ILMN_243333	ILMN_243333	EG194588	NM_001038676.1	NM_001038676.1		194588	84579822	NM_001038676.1	EG194588	NP_001033765.1	ILMN_2778712	006200600	S	1041	ACTCCAGCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCTTATGGCCA	7	+	15251122-15251171	7qA1	Mus musculus predicted gene, EG194588 (EG194588), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC117731	MGC117731
Mus musculus	RefSeq	ILMN_212081	ILMN_212081	SFRS7	NM_146083.1	NM_146083.1		225027	22122584	NM_146083.1	Sfrs7	NP_666195.1	ILMN_2785104	005700541	S	1860	GGGTTTTTCCTCCTTTGGTAGTGTCTGGTAGACCTTAGAATGGTGTAGCC	17	-	80599782-80599831	17qE3	Mus musculus splicing factor, arginine/serine-rich 7 (Sfrs7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	NX-96; 9G8; 35kDa; MGC38287; 9430065L19Rik	NX-96; 9G8; 35kDa; MGC38287; 9430065L19Rik
Mus musculus	RefSeq	ILMN_197192	ILMN_197192	LOC245070	XM_159530.2	XM_159530.2			38074522	XM_159530.2	LOC245070		ILMN_1237192	001450176	S	2948	CCTGCCCAGTAGCACAGCAAAGCTTGCAGAGAAACCAGAGACATCCCATG										
Mus musculus	RefSeq	ILMN_240463	ILMN_240463	OBFC2A	NM_028696.2	NM_028696.2		109019	126723204	NM_028696.2	Obfc2a	NP_082972.2	ILMN_2996904	000610273	S	1021	GTCAAACAGTCAGGACCACAATAAGTAACGCCAGAGATCCGAGGAGAGCC				1qC1.1	Mus musculus oligonucleotide/oligosaccharide-binding fold containing 2A (Obfc2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]	5830411E10Rik; 4930442A21Rik; AI852561; 4930488J04Rik; 4930434H03Rik; 4933440J18Rik; Nabp1; Nbp1	5830411E10Rik; 4930442A21Rik; AI852561; 4930488J04Rik; 4930434H03Rik; 4933440J18Rik; Nabp1; Nbp1
Mus musculus	Riken	ILMN_205418	ILMN_205418	MRC2	ri|E230023O15|PX00209J24|AK054150|832					AK054150	Mrc2		ILMN_1212796	003130482	S	682	GTCTTGAGACTGGAAACAACCAAACAGGGGCATAGAGGTCGGTGCTGACA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence ISA]		
Mus musculus	RefSeq	ILMN_216894	ILMN_216894	TBCE	NM_178337.2	NM_178337.2		70430	118130586	NM_178337.2	Tbce	NP_848027.1	ILMN_1213734	004250521	S	1746	GTTTTGTTGGGAAAAGACCATTTGGTTGTATATTAATAGAATAATAAAGG	13	-	14090229-14090278	13qA1	Mus musculus tubulin-specific chaperone e (Tbce), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; A process, occurring in the muscle, that is characterized by a decrease in protein content, fibre diameter, force production and fatigue resistance in response to different conditions such as starvation, aging and disuse [goid 14889] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; Generation of a long process from a neuron whose cell body resides in the peripheral nervous system. The axon carries action potential from the cell body towards target cells [goid 48936] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; The aggregation and bonding together of alpha- and beta-tubulin to form a tubulin heterodimer [goid 7021] [evidence TAS]; Folding of the microtubule constituent protein alpha-tubulin [goid 7024] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence TAS]	2610206D02Rik; C530005D02Rik; pmn	2610206D02Rik; C530005D02Rik; pmn
Mus musculus	MEEBO	ILMN_194842	ILMN_194842	9430028L06RIK	scl51346.13.1_11				27369907	NM_172629	9430028L06Rik		ILMN_1259941	006330280	S	3475	CCATGGCAGCAAAACTAATCCTGACAATCAGCATCCCTTAGGATGGGGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_194471	ILMN_194471	ZADH2	NM_146090.4	NM_146090.4		225791	146149199	NM_146090.4	Zadh2	NP_666202.2	ILMN_1232404	004230730	S	2841	CTGTCCCTTTCAGACCTAGCCACTGTAACAGGAGAGACCTCGCTGGCTCT				18qE4	Mus musculus zinc binding alcohol dehydrogenase, domain containing 2 (Zadh2), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C530046K17Rik; MGC32469	C530046K17Rik; MGC32469
Mus musculus	RefSeq	ILMN_198211	ILMN_310721	LOC100043900	XM_001481201.1	XM_001481201.1		100043900	149268925	XM_001481201.1	LOC100043900	XP_001481251.1	ILMN_1253050	003710524	S	437	GATGTGATGACTCGTCCGCACCGTATTGACTGACAGCGGGTGGCCTTTTC	17	-	83497567-83497616	17qE4	PREDICTED: Mus musculus hypothetical protein LOC100043900, transcript variant 1 (LOC100043900), mRNA.					
Mus musculus	RefSeq	ILMN_218581	ILMN_218581	H2-T3	NM_008208.3	NM_008208.3		15043	142387477	NM_008208.3	H2-T3	NP_032234.2	ILMN_1259837	006220300	S	2090	GACCTGAGCAGTTCACTTGTGGGTAAATTAAAGGATTGAGAATATCTGAG	17	-	36322554-36322603	17qB1	Mus musculus histocompatibility 2, T region locus 3 (H2-T3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]		H-2T3; TL antigen	H-2T3; TL antigen
Mus musculus	RefSeq	ILMN_195790	ILMN_315512	LOC100039636	XM_001473491.1	XM_001473491.1		100039636	149255053	XM_001473491.1	LOC100039636	XP_001473541.1	ILMN_1239946	002030725	S	858	AGAATGAACTAGAGTTGTCATTTTTCTCTTCACTGGATGTTTATTTATAA	6	+	37756828-37756877	6qB1	PREDICTED: Mus musculus similar to vacuolar H(+)-ATPase (LOC100039636), mRNA.					
Mus musculus	RefSeq	ILMN_211625	ILMN_211625	PDCL2	NM_023508.5	NM_023508.5		79455	146141214	NM_023508.5	Pdcl2	NP_075997.1	ILMN_2632847	002710044	S	239	GACACTGGCACAACTGAAAGAAGCAGAAGATGAATTTGATGAAGAAGACA				5qC3.3	Mus musculus phosducin-like 2 (Pdcl2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mgcphlp; Tphlp; 1700010B22Rik; 1700016K07Rik	Mgcphlp; Tphlp; 1700010B22Rik; 1700016K07Rik
Mus musculus	RefSeq	ILMN_211625	ILMN_211625	PDCL2	NM_023508.5	NM_023508.5		79455	146141214	NM_023508.5	Pdcl2	NP_075997.1	ILMN_2617797	004050192	S	609	GAAGGCAAATTCATTGGAATTATAGAATGTGGAGGGATAAATCTCAAGCT				5qC3.3	Mus musculus phosducin-like 2 (Pdcl2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mgcphlp; Tphlp; 1700010B22Rik; 1700016K07Rik	Mgcphlp; Tphlp; 1700010B22Rik; 1700016K07Rik
Mus musculus	Riken	ILMN_204669	ILMN_204669	9630058G16RIK	ri|9630058G16|PX00117I22|AK036329|2145					AK036329	9630058G16Rik		ILMN_1227636	000430110	S	1876	CACACCAACTACCTCAGTGTCTAGCCAGGGCACCAACCTCTGTGTAGCCC										
Mus musculus	RefSeq	ILMN_212270	ILMN_331198	LOC100039087	XM_001472144.1	XM_001472144.1		100039087	149263422	XM_001472144.1	LOC100039087	XP_001472194.1	ILMN_1236074	002120364	S	1578	CGGCATACCCAATGTTGCCGTTTTGTGGAACTACTATAAGCTTGATTGTG	12	+	89198811-89198849:89198850-89198860	12qD2	PREDICTED: Mus musculus similar to Oog1 protein, transcript variant 1 (LOC100039087), mRNA.					
Mus musculus	RefSeq	ILMN_242617	ILMN_242617	CPNE4	NM_028719.1	NM_028719.1		74020	58037332	NM_028719.1	Cpne4	NP_082995.1	ILMN_2818246	001400017	S	3120	GTCCAACTTTCCGTTCTAATCGCTTGGTCTTTGAGCTCACTGTGGGGGCC	9	+	104936340-104936389	9qF1	Mus musculus copine IV (Cpne4), mRNA.				4933406O10Rik; 3632411M23Rik	4933406O10Rik; 3632411M23Rik
Mus musculus	MEEBO	ILMN_191271	ILMN_191271	SCL0002292.1_30	scl0002292.1_30	BC050108.1			29476926	BC050108.1	scl0002292.1_30		ILMN_2477665	004060372	S	19	ATACTGCTCTAGCACACGTAGCAATGCCTGTCCGTGAAACCAACCCCTGG										
Mus musculus	RefSeq	ILMN_217141	ILMN_217141	WDR16	NM_027963.2	NM_027963.2		71860	134053951	NM_027963.2	Wdr16	NP_082239.2	ILMN_2679522	004120358	S	1831	CGGATAAGTCCAGGAAACCAGTATATCGTCAGTGTGAGCGCAGATGGAGC	11	-	67738628-67738677	11qB3	Mus musculus WD repeat domain 16 (Wdr16), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			4933417B11Rik; WDRPUH; 1700019F09Rik; RP23-464J2.3; MGC141350	4933417B11Rik; WDRPUH; 1700019F09Rik; RP23-464J2.3; MGC141350
Mus musculus	RefSeq	ILMN_219937	ILMN_219937	B4GALT2	NM_017377.4	NM_017377.4		53418	77682040	NM_017377.4	B4galt2	NP_059073.1	ILMN_2715436	004860717	S	1958	ACTAGGGGGCAGTGTCTCTTCCAGGGGGGAATTCCTCAGATCTGGAGACC	4	-	117546022-117546071	4qD2.1	Mus musculus UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 (B4galt2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-galactose + D-glucose = UDP + lactose [goid 4461] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine [goid 3945] [evidence IEA]	Ggtb2	Ggtb2
Mus musculus	RefSeq	ILMN_218442	ILMN_218442	KCNJ12	NM_010603.4	NM_010603.4		16515	141803056	NM_010603.4	Kcnj12	NP_034733.2	ILMN_2695900	005090037	S	2086	GGTCCCAGCCCCGGTGGGAGGAGGCTGTGTATGTACACTTCATTGGTTTT	11	+	60884256-60884305	11qB2	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 12 (Kcnj12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]	MGC144838; MGC144839; Kir2.2; MB-IRK2; IRK2	MGC144838; MGC144839; Kir2.2; MB-IRK2; IRK2
Mus musculus	RefSeq	ILMN_217884	ILMN_217884	OLFR648	NM_146751.1	NM_146751.1		258746	22129342	NM_146751.1	Olfr648	NP_666962.1	ILMN_1256392	004670669	S	848	TGTTATTCCACCGGCAATGAACCCCATTGTCTACGGAGTGAAAACCAAGC	7	-	111328023-111328072	7qE3	Mus musculus olfactory receptor 648 (Olfr648), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC129237; MOR31-12	MGC129237; MOR31-12
Mus musculus	RefSeq	ILMN_200318	ILMN_200318	LOC386218	XM_359123.1	XM_359123.1			38081300	XM_359123.1	LOC386218		ILMN_1235173	002100577	S	1107	GTTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAA										
Mus musculus	RefSeq	ILMN_202130	ILMN_211583	GRIN2B	NM_008171.3	NM_008171.3		14812	117168298	NM_008171.3	Grin2b	NP_032197.3	ILMN_2547237	000510431	S	199	TTTGCAGGAAAGAAAACGTCTCAAACCCTCGACACCCGCCACCCCTCTCC	6	-	136122912-136122961	6qG1	Mus musculus glutamate receptor, ionotropic, NMDA2B (epsilon 2) (Grin2b), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD [goid 17146] [evidence IPI]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IDA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IDA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Any process that modulates the establishment or extent of the postsynaptic membrane potential, which is generated by changes in the membrane potential of the post synaptic neuron that receives information at a synapse. The presynaptic neuron releases neurotransmitters into the synaptic cleft which bind to receptors on the postsynaptic neuron. After being bound by the neurotransmitters, these receptors can open or close an ion channel, allowing ions to enter or leave the cell and therefore altering the membrane potential of the postsynaptic neuron [goid 60078] [evidence IMP]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence TAS]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IGI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IGI]; The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure [goid 7423] [evidence IMP]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IMP]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IGI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nmdar2b; NR2B	Nmdar2b; NR2B
Mus musculus	RefSeq	ILMN_219084	ILMN_219084	SLC4A4	NM_018760.1	NM_018760.1		54403	9055345	NM_018760.1	Slc4a4	NP_061230.1	ILMN_2993221	003400554	S	2993	AGGCATGGACTACCTCTTCTCCCAGCATGACCTCAGCTTCCTTGATGATG	5	+	90303439-90303488	5qE1	Mus musculus solute carrier family 4 (anion exchanger), member 4 (Slc4a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence TAS]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence ISS]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]	Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA];  [goid 5452] [evidence IEA];  [goid 15380] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + HCO3-(out) = Na+(in) + HCO3-(in) [goid 8510] [evidence ISS]	NBC; NBC1; AI835705	NBC; NBC1; AI835705
Mus musculus	RefSeq	ILMN_219084	ILMN_219084	SLC4A4	NM_018760.1	NM_018760.1		54403	9055345	NM_018760.1	Slc4a4	NP_061230.1	ILMN_1221628	005490019	S	2966	GATCTTGGCACTTGTAGCTGTCAGAAAAGGCATGGACTACCTCTTCTCCC	5	+	90303412-90303461	5qE1	Mus musculus solute carrier family 4 (anion exchanger), member 4 (Slc4a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence TAS]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence ISS]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]	Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA];  [goid 5452] [evidence IEA];  [goid 15380] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + HCO3-(out) = Na+(in) + HCO3-(in) [goid 8510] [evidence ISS]	NBC; NBC1; AI835705	NBC; NBC1; AI835705
Mus musculus	RefSeq	ILMN_191359	ILMN_233625	TMPRSS7	NM_172455.2	NM_172455.2		208171	117168266	NM_172455.2	Tmprss7	NP_766043.2	ILMN_1229433	003450647	S	2181	GTCTACACAAGGGTGTCAAGCTTTGTTCCCTGGATTCATAAGTATGTCCC	16	-	45656533-45656582	16qB5	Mus musculus transmembrane serine protease 7 (Tmprss7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Gm1748; B230219I23Rik	Gm1748; B230219I23Rik
Mus musculus	RefSeq	ILMN_200276	ILMN_229440	BC055004	NM_001013773.2	NM_001013773.2		381680	110625602	NM_001013773.2	BC055004	NP_001013795.2	ILMN_1258189	004060746	S	2604	TGGTTTGGTGAGGTGGTGGTTGGGGAGGTGGGGACATCCTTGTGGAGACA	5	+	138693598-138693647	5qG2	Mus musculus cDNA sequence BC055004 (BC055004), mRNA.				MGC118496	MGC118496
Mus musculus	Riken	ILMN_204687	ILMN_204687	A230091C07RIK	ri|A230091C07|PX00130M23|AK039058|3113					AK039058	A230091C07Rik		ILMN_1251711	007200632	S	2380	CTTGGCATCACTCACTCCGGGGGACGCTACACAGAAGACTAGATAGGTTC										
Mus musculus	RefSeq	ILMN_197984	ILMN_197984	LOC224161	XM_156207.3	XM_156207.3			38079949	XM_156207.3	LOC224161		ILMN_1235130	001510356	S	480	GGGTGCATGTTGTGGTGCAGAAGCTGCAAATGATGAAGCGGACAAAACCT										
Mus musculus	RefSeq	ILMN_215899	ILMN_215899	RNF138	NM_207623.1	NM_207623.1		56515	46488940	NM_207623.1	Rnf138	NP_997506.1	ILMN_2664937	006770242	S	893	GGGGAGATCCTAGCCAGATTACTAGAAATTTCGTTAGTCATCTAAATCAA	18	+	21182938-21182987	18qA2	Mus musculus ring finger protein 138 (Rnf138), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	STRIN; Trif; Trif-d; 2410015A17Rik; 2810480D20Rik	STRIN; Trif; Trif-d; 2410015A17Rik; 2810480D20Rik
Mus musculus	RefSeq	ILMN_200172	ILMN_200172	LOC385865	XM_358975.1	XM_358975.1			38080778	XM_358975.1	LOC385865		ILMN_2537836	006510386	S	331	GCCACCTCACCAGGCATACAGCTTCAGCTAATCAGGGCAGCAGGGGCATA										
Mus musculus	MEEBO	ILMN_209624	ILMN_209624	RABL3	scl49167.8_434	NM_026297.1			13385791	NM_026297.1	Rabl3		ILMN_1249313	002970685	S	1676	TATGAGCCCGTGTTTGAGGTTTCATCATCACGCTGCAACGTTTTTGGCGG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	Riken	ILMN_203491	ILMN_203491	B830003C01RIK	ri|B830003C01|PX00072A08|AK046775|3070					AK046775	B830003C01Rik		ILMN_1227177	004480176	S	2889	CTTACCTGTGGACATAAGCTAGAACAAGTGACTGGCGGGTGCCCATCCCC										
Mus musculus	Riken	ILMN_205525	ILMN_205525	D130051O21RIK	ri|D130051O21|PX00185A07|AK051476|2325					AK051476	D130051O21Rik		ILMN_1258579	003390528	S	2152	CCACATAGGCTGGCTGCCGCTGCCTAATGACTTACAGAAAACTCACACTG										
Mus musculus	RefSeq	ILMN_190497	ILMN_190497	TMEM47	NM_175771.4	NM_175771.4		192216	146198812	NM_175771.4	Tmem47	NP_786965.1	ILMN_2470672	006400634	S	2480	CTCCCAGAGCAGATTTCTGCTTTCAGCTTATCTTAAGAATGGTTGCCAAG				XqB	Mus musculus transmembrane protein 47 (Tmem47), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]			Tm4sf10; BCMP1; AI115536; 3010015F07Rik	Tm4sf10; BCMP1; AI115536; 3010015F07Rik
Mus musculus	RefSeq	ILMN_259237	ILMN_259237	KLHL15	NM_153165.2	NM_153165.2		236904	84794639	NM_153165.2	Klhl15	NP_694805.1	ILMN_3143069	001780356	A	1056	TGCAGTCTTGGCTGCGACATGATAGACGACGGTGGAGACACACAGATACC	X	+	91498362-91498411	XqC3	Mus musculus kelch-like 15 (Drosophila) (Klhl15), transcript variant 4, mRNA.				6330500C13Rik; MGC47138	6330500C13Rik; MGC47138
Mus musculus	RefSeq	ILMN_235198	ILMN_235198	MEF2C	NM_025282.1	NM_025282.1		17260	13384623	NM_025282.1	Mef2c	NP_079558.1	ILMN_2887992	002570427	S	2146	GGTTTGGACAGACCCGGCAAGTGGTGACTACCGGTAATTGTAGGAACACG	13	+	84141004-84141053	13qC3	Mus musculus myocyte enhancer factor 2C (Mef2c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AV011172; 5430401D19Rik; 9930028G15Rik	AV011172; 5430401D19Rik; 9930028G15Rik
Mus musculus	RefSeq	ILMN_206667	ILMN_227322	C230029F24RIK	NM_001002792.2	NM_001002792.2		442837	142357047	NM_001002792.2	C230029F24Rik	NP_001002792.1	ILMN_1234917	006550241	S	87	AAGAGTGAGATTTTCCAGAGTGCCAAGAGACAGGGAGAGGAGAGGAGAGG	1	+	49301546-49301572:49367664-49367686	1qC1.1	Mus musculus RIKEN cDNA C230029F24 gene (C230029F24Rik), mRNA.					
Mus musculus	Riken	ILMN_206841	ILMN_206841	E330019C05RIK	ri|E330019C05|PX00211I08|AK087769|632					AK087769	E330019C05Rik		ILMN_1252088	000070594	S	452	TTGCAAGGAAGGCTTTTGGGAGCCCAGAGACTGAGGAGCAACAGCACGCC										
Mus musculus	RefSeq	ILMN_193957	ILMN_313476	1700028I16RIK	XM_001475840.1	XM_001475840.1		70003	149260967	XM_001475840.1	1700028I16Rik	XP_001475890.1	ILMN_2502017	005490201	S	545	CCCTTCTTGCTTTGGATCTTCTGAATTCCTGCAGTTGGGACAGCTCACAC	10	+	82281795-82281844	10qC1	PREDICTED: Mus musculus RIKEN cDNA 1700028I16 gene (1700028I16Rik), mRNA.					
Mus musculus	Riken	ILMN_207272	ILMN_207272	G630008C18RIK	ri|G630008C18|PL00013E06|AK090160|3006					AK090160	G630008C18Rik		ILMN_1240192	005270327	S	2672	TCTGCAGGGTCTGTGCATGATAGAGAGTCAGGAGATGAAGGGAAGAGGGG										
Mus musculus	RefSeq	ILMN_221032	ILMN_221032	SMPD2	NM_009213.2	NM_009213.2		20598	77539780	NM_009213.2	Smpd2	NP_033239.1	ILMN_2867033	005490500	S	1271	CTGGTGGGCTGCATTCTCTGGCTATGTGATCGTTTGGGGGCTGTCCCTTC	10	-	41207259-41207308	10qB2	Mus musculus sphingomyelin phosphodiesterase 2, neutral (Smpd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IMP]	nSMase; nSMase1; AW108287	nSMase; nSMase1; AW108287
Mus musculus	RefSeq	ILMN_222569	ILMN_222569	OLFR419	NM_146715.1	NM_146715.1		258710	22129406	NM_146715.1	Olfr419	NP_666926.1	ILMN_2751611	003990736	S	638	TAATTAGTGTCTCCTATGCCTATATTTTGGTAGCAATCCTGAGAATCCCT	1	-	176180369-176180418	1qH3	Mus musculus olfactory receptor 419 (Olfr419), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-6	MOR267-6
Mus musculus	RefSeq	ILMN_211540	ILMN_211540	ABCA4	NM_007378.1	NM_007378.1		11304	6671494	NM_007378.1	Abca4	NP_031404.1	ILMN_2829604	006960615	S	6931	CAGGAGCCTTTGCCCGCAGGATCTGAACAACTGGCTAACGGAAGCAACCC	3	+	121882662-121882711	3qG1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 4 (Abca4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The transfer of a phospholipid from its site of synthesis to the plasma membrane [goid 6649] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [evidence IMP]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IMP]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence TAS]	D430003I15Rik; Abc10; Abcr; RmP; AW050280	D430003I15Rik; Abc10; Abcr; RmP; AW050280
Mus musculus	RefSeq	ILMN_211540	ILMN_211540	ABCA4	NM_007378.1	NM_007378.1		11304	6671494	NM_007378.1	Abca4	NP_031404.1	ILMN_2728706	000290368	S	5567	TGTTGAGGAAGTTGCTCATTGTCTTCCCCCACTTCTGCCTGGGCAGGGGC	3	+	121860775-121860824	3qG1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 4 (Abca4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The transfer of a phospholipid from its site of synthesis to the plasma membrane [goid 6649] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [evidence IMP]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IMP]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence TAS]	D430003I15Rik; Abc10; Abcr; RmP; AW050280	D430003I15Rik; Abc10; Abcr; RmP; AW050280
Mus musculus	RefSeq	ILMN_211540	ILMN_211540	ABCA4	NM_007378.1	NM_007378.1		11304	6671494	NM_007378.1	Abca4	NP_031404.1	ILMN_2829608	002060338	S	6991	GAAGATAAGCACACCAGGAGTCCACAGTGAGCTGGAGGAGACTCTTTCAG	3	+	121882722-121882751:121882752-121882771	3qG1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 4 (Abca4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The transfer of a phospholipid from its site of synthesis to the plasma membrane [goid 6649] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [evidence IMP]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IMP]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence TAS]	D430003I15Rik; Abc10; Abcr; RmP; AW050280	D430003I15Rik; Abc10; Abcr; RmP; AW050280
Mus musculus	Riken	ILMN_206593	ILMN_206593	E030007H10RIK	ri|E030007H10|PX00204L24|AK086878|1352					AK086878	E030007H10Rik		ILMN_2581247	002850195	S	874	GTGCTCTCTGAAGTGGTGGACATACGTGTGAGAAGGCAGACACCATAGTG										
Mus musculus	RefSeq	ILMN_216490	ILMN_216490	AANAT	NM_009591.2	NM_009591.2		11298	133892622	NM_009591.2	Aanat	NP_033721.1	ILMN_2671661	000430088	S	880	AGCATGAAGGGAGACAGCGGTTCCCAACTGGAGTACAGAGGTAAGGGCCA	11	+	116458521-116458570	11qE2	Mus musculus arylalkylamine N-acetyltransferase (Aanat), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + an aralkylamine = CoA + an N-acetylaralkylamine [goid 4059] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [evidence IDA]	Nat4; Nat-2; SNAT; MGC151344	Nat4; Nat-2; SNAT; MGC151344
Mus musculus	RefSeq	ILMN_219001	ILMN_219001	MKX	NM_177595.3	NM_177595.3		210719	142364700	NM_177595.3	Mkx	NP_808263.1	ILMN_1249634	006660041	S	3049	GCCTGCCCAGATGTGCATGAGGCAGTGAGAAGCAAGAACGAATACTTCAC	18	-	6935043-6935092	18qA1	Mus musculus mohawk (Mkx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 16408284] [evidence IEP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9430023B20Rik; Irxl1	9430023B20Rik; Irxl1
Mus musculus	RefSeq	ILMN_212377	ILMN_212377	NCAPD2	NM_146171.1	NM_146171.1		68298	22165391	NM_146171.1	Ncapd2	NP_666283.1	ILMN_2625746	003930196	S	3963	GGCATGGATGGAATAGAGGAGTTTGAAACTGGCCAGGGAGGCAGCCAGCG	6	-	125118910-125118959	6qF3	Mus musculus non-SMC condensin I complex, subunit D2 (Ncapd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence ISO]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells [goid 30261] [evidence IEA]		MGC39046; mKIAA0159; CAP-D2; 2810406C15Rik; CNAP1	MGC39046; mKIAA0159; CAP-D2; 2810406C15Rik; CNAP1
Mus musculus	RefSeq	ILMN_212377	ILMN_212377	NCAPD2	NM_146171.1	NM_146171.1		68298	22165391	NM_146171.1	Ncapd2	NP_666283.1	ILMN_2625747	005090180	S	3965	GCATGGATGGAATAGAGGAGTTTGAAACTGGCCAGGGAGGCAGCCAGCGA	6	-	125118908-125118957	6qF3	Mus musculus non-SMC condensin I complex, subunit D2 (Ncapd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence ISO]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells [goid 30261] [evidence IEA]		MGC39046; mKIAA0159; CAP-D2; 2810406C15Rik; CNAP1	MGC39046; mKIAA0159; CAP-D2; 2810406C15Rik; CNAP1
Mus musculus	RefSeq	ILMN_212377	ILMN_212377	NCAPD2	NM_146171.1	NM_146171.1		68298	22165391	NM_146171.1	Ncapd2	NP_666283.1	ILMN_2956102	004480070	S	4120	GGTCGTCCACAAACTCAGCAGCGCAAGAAGTCCCAGAGGAAAGCCAAAGT	6	-	125118639-125118688	6qF3	Mus musculus non-SMC condensin I complex, subunit D2 (Ncapd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence ISO]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells [goid 30261] [evidence IEA]		MGC39046; mKIAA0159; CAP-D2; 2810406C15Rik; CNAP1	MGC39046; mKIAA0159; CAP-D2; 2810406C15Rik; CNAP1
Mus musculus	RefSeq	ILMN_211852	ILMN_211852	P2RX4	NM_011026.2	NM_011026.2		18438	117676373	NM_011026.2	P2rx4	NP_035156.2	ILMN_1237644	002030484	S	1325	TGCTGCGTCTGTCACTCTAGAGACGGTTCCAGAGTCTCACTCGGTCTCCA	5	+	123178383-123178432	5qF	Mus musculus purinergic receptor P2X, ligand-gated ion channel 4 (P2rx4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IDA]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence TAS]	D5Ertd444e; AI504491; AW555605; P2X4	D5Ertd444e; AI504491; AW555605; P2X4
Mus musculus	RefSeq	ILMN_211852	ILMN_211852	P2RX4	NM_011026.2	NM_011026.2		18438	117676373	NM_011026.2	P2rx4	NP_035156.2	ILMN_2620122	003120341	S	546	TTCCATTCAACGCGTCTGTGAAGACCTGTGAGGTGGCCGCATGGTGCCCA	5	+	123169160-123169209	5qF	Mus musculus purinergic receptor P2X, ligand-gated ion channel 4 (P2rx4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IDA]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence TAS]	D5Ertd444e; AI504491; AW555605; P2X4	D5Ertd444e; AI504491; AW555605; P2X4
Mus musculus	Riken	ILMN_202045	ILMN_202045	PINX1-PENDING	ri|2610028A01|ZX00055J02|AK011578|1211					AK011578	Pinx1-pending		ILMN_2546598	003830037	S	151	CTAGGTCAGCACAGAAGGACCAGCAGAATCACGGAGCTCTGGAACATGCA										
Mus musculus	MEEBO	ILMN_196101	ILMN_196101	SCL0002993.1_1671	scl0002993.1_1671	AK083396.1			26101219	AK083396.1	scl0002993.1_1671		ILMN_1236077	000730343	S	11	GGAAGCAACAGAGCTTGGGGTGGGGCTCTGAAGATTACTAAGATCTCTGC										
Mus musculus	RefSeq	ILMN_212139	ILMN_212139	EHBP1	NM_153078.2	NM_153078.2		216565	154240709	NM_153078.2	Ehbp1	NP_694718.2	ILMN_2623163	003400537	S	4022	CACAGAGCTCCAGATAGCTTTAAAGACTCTTTGAGTTAATCATGAAATCA				11qA3.2	Mus musculus EH domain binding protein 1 (Ehbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Flj21950; NACSIN; AF424697; RP23-51G7.3	Flj21950; NACSIN; AF424697; RP23-51G7.3
Mus musculus	RefSeq	ILMN_201543	ILMN_201543	RAET1A	NM_009016.1	NM_009016.1		19368	6679616	NM_009016.1	Raet1a	NP_033042.1	ILMN_2985228	004220181	S	1328	GAGAATATAGTTTGAATATTATTAAACCCAGGGCAAGTCCCACAGTAAGC	10	+	22063350-22063399		Mus musculus retinoic acid early transcript 1, alpha (Raet1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]	RAE-1alpha; Raet1; Rae1alpha	RAE-1alpha; Raet1; Rae1alpha
Mus musculus	RefSeq	ILMN_201543	ILMN_201543	RAET1A	NM_009016.1	NM_009016.1		19368	6679616	NM_009016.1	Raet1a	NP_033042.1	ILMN_2644699	005870543	S	980	ATGAATTCTTAAAGCAGCCCAAGGAAAAGCCAAGATCAACCTCAAGGTCC	10	+	22061026-22061046:22061605-22061633		Mus musculus retinoic acid early transcript 1, alpha (Raet1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]	RAE-1alpha; Raet1; Rae1alpha	RAE-1alpha; Raet1; Rae1alpha
Mus musculus	RefSeq	ILMN_205667	ILMN_234849	LMO7	XM_895728.2	XM_895728.2		380928	94397293	XM_895728.2	Lmo7	XP_900821.1	ILMN_2574336	003390475	S	3109	CCCCTGCACTCCTTAGTGGGACTGTGGTTCTGTTTTCCTTCTGAGTGGGT	14	+	100817145-100817194	14qE2.3	PREDICTED: Mus musculus LIM domain only 7, transcript variant 7 (Lmo7), mRNA.	The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISO]; An adherens junction which connects two cells to each other [goid 5913] [evidence ISO]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with actinin, any member of a family of proteins that crosslink F-actin [goid 42805] [evidence ISO]		
Mus musculus	RefSeq	ILMN_219559	ILMN_219559	HEBP2	NM_019487.3	NM_019487.3		56016	118130701	NM_019487.3	Hebp2	NP_062360.1	ILMN_2710455	001500528	S	1641	GATGGCGCTCACTCTGATGCAGGCTCCTGGGAAGATGGCTCTGACAGTGT	10	-	18260148-18260197	10qA3	Mus musculus heme binding protein 2 (Hebp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			SOUL	SOUL
Mus musculus	RefSeq	ILMN_191942	ILMN_241384	AKR1C20	NM_054080.1	NM_054080.1		116852	16905110	NM_054080.1	Akr1c20	NP_473421.1	ILMN_2663228	003520719	S	948	CAGTAACATTCTATCTTAGCATTATATTGGAAATTTAACCTTAAGTGTGT	13	-	4506713-4506762	13qA1	Mus musculus aldo-keto reductase family 1, member C20 (Akr1c20), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence ISA]	Catalysis of the NADPH-dependent reduction of carbonyl compounds [goid 4033] [evidence ISA]	2610528B18Rik	2610528B18Rik
Mus musculus	RefSeq	ILMN_242198	ILMN_242198	CASS4	NM_001080820.1	NM_001080820.1		320664	124249363	NM_001080820.1	Cass4	NP_001074289.1	ILMN_3138107	001050543	A	1844	GGAGAGATGGACTTGAAGTGTGAGAGATGCATCCGGCCTCCCCAAAGAGA	2	+	172253276-172253325	2qH3	Mus musculus Cas scaffolding protein family member 4 (Cass4), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-228E2.3	RP23-228E2.3
Mus musculus	RefSeq	ILMN_209978	ILMN_244476	TACC2	NM_001004468.2	NM_001004468.2		57752	59624975	NM_001004468.2	Tacc2	NP_001004468.1	ILMN_2738739	005360382	S	5397	TGCCCGTGCAAGTCCTGCTCCTTTGGCCCCAGAACATACAGCCTCGGCTC	7	+	137818131-137818180	7qF3	Mus musculus transforming, acidic coiled-coil containing protein 2 (Tacc2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles [goid 30953] [evidence IDA]; The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle [goid 22027] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton [goid 32886] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence ISO]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]	KIAA4180; mKIAA4180	KIAA4180; mKIAA4180
Mus musculus	RefSeq	ILMN_209978	ILMN_244476	TACC2	NM_001004468.2	NM_001004468.2		57752	59624975	NM_001004468.2	Tacc2	NP_001004468.1	ILMN_2724156	006200142	S	5297	TTGACCCGGGACACCCACCCTTAGCTGACTCGTCCCACCATGGTGACGCT	7	+	137806571-137806620	7qF3	Mus musculus transforming, acidic coiled-coil containing protein 2 (Tacc2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles [goid 30953] [evidence IDA]; The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle [goid 22027] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton [goid 32886] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence ISO]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]	KIAA4180; mKIAA4180	KIAA4180; mKIAA4180
Mus musculus	Riken	ILMN_203435	ILMN_203435	D730005F20RIK	ri|D730005F20|PX00089F14|AK052793|1635					AK052793	D730005F20Rik		ILMN_1232173	001690653	S	1484	GAACACCCGTAAGTCCCATCACTAAACCCCACCAAAGTGCTGGCTGCAGG										
Mus musculus	MEEBO	ILMN_216037	ILMN_216037	NINJ1	scl44797.9.1_24	NM_013610.1			7305314	NM_013610.1	Ninj1		ILMN_2666582	004210553	S	575	AAGGTGGCCACCGCTGGACCATGGTCAGGGACGGACTTCCGTCCAACTGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The regrowth of lost or destroyed tissues [goid 42246] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_220884	ILMN_220884	D030034H08	scl0329695.3_190				47604965	NM_001001306	D030034H08		ILMN_1252957	004120075	S	1367	CGGTAAGACTCCATGTGATCTAAGAGAAAGTTCCTCGGGGGACTCTGGGC										
Mus musculus	MEEBO	ILMN_186356	ILMN_186356	MTDNA_ND2	mtDNA_ND2						mtDNA_ND2		ILMN_2434853	004540195	S	14	CCATCATCTACTTCACAATCTTCTTAGGTCCTGTAATCACAATATCCAGC										
Mus musculus	Riken	ILMN_206315	ILMN_206315	PFTK1	ri|D130009P16|PX00182M11|AK083790|2338					AK083790	Pftk1		ILMN_1240518	000520671	S	2275	GGTCAGGCAGTTGAATACCACTGGACACATTAACTCTGCTGGGTTTTGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]		
Mus musculus	MEEBO	ILMN_187533	ILMN_187533	1500015A07RIK	scl51880.1_321						1500015A07Rik		ILMN_2444941	005090349	S	7	GGGACTTGGATGAACGGGTATCTGAATGAGAAGATGGACTAGTGTTTGAG										
Mus musculus	MEEBO	ILMN_223859	ILMN_223859	MTHFD1	scl0002379.1_67				20270274	NM_138745	Mthfd1		ILMN_2770528	006560161	S	1850	GACTGGGCAGAATGGTGGTAGCGTCCAGTAAGAAAGGGGAGCCTATCAGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 105] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IMP]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + NADP+ + H2O = tetrahydrofolate + CO2 + NADPH + H+ [goid 16155] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: ATP + formate + tetrahydrofolate = ADP + phosphate + 10-formyltetrahydrofolate [goid 4329] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP+ = 5,10-methenyltetrahydrofolate + NADPH + H+ [goid 4488] [evidence IEA]; Catalysis of the reaction: 5,10-methenyltetrahydrofolate + H2O = 10-formyltetrahydrofolate [goid 4477] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223859	ILMN_223859	MTHFD1	scl0002379.1_67				20270274	NM_138745	Mthfd1		ILMN_1229915	005810544	S	3057	ATGTCATGTATAAATTAACATAAATCATGTCTATTTACATAGTGAAGGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 105] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IMP]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + NADP+ + H2O = tetrahydrofolate + CO2 + NADPH + H+ [goid 16155] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: ATP + formate + tetrahydrofolate = ADP + phosphate + 10-formyltetrahydrofolate [goid 4329] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP+ = 5,10-methenyltetrahydrofolate + NADPH + H+ [goid 4488] [evidence IEA]; Catalysis of the reaction: 5,10-methenyltetrahydrofolate + H2O = 10-formyltetrahydrofolate [goid 4477] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199551	ILMN_199551	LOC383621	XM_357161.1	XM_357161.1			38074185	XM_357161.1	LOC383621		ILMN_1216120	002570465	S	132	CCGCACCACCGCCTGCTTGCTTTTTTCCCACTCTCGCTTTGCATTACTGG										
Mus musculus	RefSeq	ILMN_225702	ILMN_225702	ASCC1	NM_026937.1	NM_026937.1		69090	58037140	NM_026937.1	Ascc1	NP_081213.1	ILMN_2859902	001660725	S	947	GGAAAGACCCCAACGCGGAAGGCAGGTACAATCTCTACACAGCAGATGGC	10	+	59525318-59525332:59527071-59527105	10qB4	Mus musculus activating signal cointegrator 1 complex subunit 1 (Ascc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISO]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	CGI-18; ASC1p50; AI550520; 1810015P09Rik	CGI-18; ASC1p50; AI550520; 1810015P09Rik
Mus musculus	RefSeq	ILMN_211349	ILMN_225702	ASCC1	NM_026937.1	NM_026937.1		69090	58037140	NM_026937.1	Ascc1	NP_081213.1	ILMN_1249719	003850577	S	1331	TCCTTACCCTCCACCCTCCTTTCTGTGACTCTGCTCCTGAGCTCTGTGGT	10	+	59562615-59562664	10qB4	Mus musculus activating signal cointegrator 1 complex subunit 1 (Ascc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISO]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	CGI-18; ASC1p50; AI550520; 1810015P09Rik	CGI-18; ASC1p50; AI550520; 1810015P09Rik
Mus musculus	RefSeq	ILMN_229140	ILMN_229140	EG667723	NR_002945.2	NR_002945.2		667723	95007002	NR_002945.2	EG667723		ILMN_3136416	001660521	A	663	GGAACTTAAGAAGTATGGAGTTACCACAATAGTAAGAGTATGTGAAGCAA				19qC3	Mus musculus predicted gene, EG667723 (EG667723), non-coding RNA.					
Mus musculus	RefSeq	ILMN_222540	ILMN_222540	PTPN20	NM_008978.2	NM_008978.2		19256	118130575	NM_008978.2	Ptpn20	NP_033004.1	ILMN_2751150	004200491	S	2572	GTCCGCTGTTCCATTCATTATATCAGGACTCAGACAAATGTGGTGGTTCC	14	+	34453422-34453471	14qB	Mus musculus protein tyrosine phosphatase, non-receptor type 20 (Ptpn20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	typ	typ
Mus musculus	RefSeq	ILMN_200378	ILMN_200378	LOC386370	XM_359189.1	XM_359189.1			38081470	XM_359189.1	LOC386370		ILMN_2538549	000160468	S	341	CCAGCACTCATGTCAAGCAGTTCACGCACAACAACAGCAGTAACTCCAGC										
Mus musculus	RefSeq	ILMN_201098	ILMN_201098	LOC384780	XM_357861.1	XM_357861.1			38089112	XM_357861.1	LOC384780		ILMN_2541072	003400347	S	1151	AAGCAGAGAACACAAAATCCTGCCGCTTCAAGGACACCTGCTACCTTGTG										
Mus musculus	MEEBO	ILMN_217576	ILMN_217576	HNRPH1	scl0001293.1_51	NM_021510.1			10946927	NM_021510.1	Hnrph1		ILMN_2684986	002120280	S	535	ACGGGGGAGGCCTTCGTGCAGTTTGCTTCACAGGAAATAGCTGAAAAGGC										
Mus musculus	RefSeq	ILMN_209051	ILMN_209051	IFT20	NM_018854.3	NM_018854.3		55978	32129288	NM_018854.3	Ift20	NP_061342.1	ILMN_2847618	003940575	S	573	ACGAGAAGATGAAGGCCATTGGTGCTCGGAACTTGCTGAAGTCCATAGCG	11	+	78356228-78356240:78357090-78357126	11qB5	Mus musculus intraflagellar transport 20 homolog (Chlamydomonas) (Ift20), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]		0610009H04Rik; RP23-399H5.8; AU015496	0610009H04Rik; RP23-399H5.8; AU015496
Mus musculus	RefSeq	ILMN_209051	ILMN_209051	IFT20	NM_018854.3	NM_018854.3		55978	32129288	NM_018854.3	Ift20	NP_061342.1	ILMN_2592093	006180189	S	256	TGTGACAAGCAACTGGACTTTCCTCTTTCCTGACCCTTGCTCCTATGACA	11	+	78354819-78354868	11qB5	Mus musculus intraflagellar transport 20 homolog (Chlamydomonas) (Ift20), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]		0610009H04Rik; RP23-399H5.8; AU015496	0610009H04Rik; RP23-399H5.8; AU015496
Mus musculus	MEEBO	ILMN_187442	ILMN_187442	MEP1B	scl15265.3.1_6				6678861	NM_008586	Mep1b		ILMN_2634670	003190445	S	863	AAGTTCGGGGGATAGTGCTGACTGGCAGCGGGTTTCACAGGTTCTCAGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187442	ILMN_187442	MEP1B	scl15265.3.1_6				6678861	NM_008586	Mep1b		ILMN_2634667	002750603	S	859	TCCAAAGTTCGGGGGATAGTGCTGACTGGCAGCGGGTTTCACAGGTTCTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192870	ILMN_255855	LOC630408	XM_903553.1	XM_903553.1		630408	82954760	XM_903553.1	LOC630408	XP_908646.1	ILMN_2492102	000870762	S	21	ACTAGTGGTCCTGTGGCTTCAGCTACACTGGGTGAACAGCCAGCAGAAGG	14	+	53285018-53285046:53285227-53285247		PREDICTED: Mus musculus similar to TRAV7-1 (LOC630408), mRNA.					
Mus musculus	RefSeq	ILMN_220710	ILMN_220710	OLFR1377	NM_146911.1	NM_146911.1		258913	22129070	NM_146911.1	Olfr1377	NP_667122.1	ILMN_2725638	004210452	S	804	GCAGGACACGGTGGCTACTGTCATCTTTACAGTGGTGACTCCATTGGTCA	11	+	50799008-50799057	11qB1.3	Mus musculus olfactory receptor 1377 (Olfr1377), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR129-1	MOR129-1
Mus musculus	RefSeq	ILMN_196438	ILMN_196438	ARL14	XM_130919.5	XM_130919.5		71619	94369645	XM_130919.5	Arl14	XP_130919.1	ILMN_2638388	002480646	S	991	AGTTCCCAGATGTTACTGGCATTGAATTTCTACCCTGTCCTTAGGTAGTA	3	+	69027331-69027380	3qE1	PREDICTED: Mus musculus ADP-ribosylation factor-like 14 (Arl14), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196438	ILMN_196438	ARL14	XM_130919.5	XM_130919.5		71619	94369645	XM_130919.5	Arl14	XP_130919.1	ILMN_1233922	005810608	S	545	AGCAACCGGAACTGGTATGTGCAACCCTGCTGTGCGGTCACTGGAGAAGG	3	+	69026885-69026934	3qE1	PREDICTED: Mus musculus ADP-ribosylation factor-like 14 (Arl14), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219795	ILMN_219795	KAP	NM_010594.2	NM_010594.2		16483	117676368	NM_010594.2	Kap	NP_034724.1	ILMN_2713664	001780224	S	426	GAAATAAACCTGCGACTGCCATTCAGGATATTGTCTTTGTAGAAAATGAT	6	-	133800005-133800054	6qG1	Mus musculus kidney androgen regulated protein (Kap), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AW146435; FKSG22	AW146435; FKSG22
Mus musculus	RefSeq	ILMN_214351	ILMN_214351	PCMTD2	NM_153594.2	NM_153594.2		245867	31559900	NM_153594.2	Pcmtd2	NP_705822.1	ILMN_2647084	004570181	S	2816	GGTTGTTCTTGATGTTAACTCTGATTGTTAGCTAGACTTTTGTTACCTGG	2	+	181591462-181591511	2qH4	Mus musculus protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 (Pcmtd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester [goid 4719] [evidence IEA]	AI314201; 5330414D10Rik; MGC36470	AI314201; 5330414D10Rik; MGC36470
Mus musculus	Riken	ILMN_206822	ILMN_206822	TNFRSF6	ri|E030012O08|PX00205A16|AK086933|532					AK086933	Tnfrsf6		ILMN_2582933	003610377	S	220	AACTAGGCTGAGCATTTTGGAGACCATCAGAAATTCAGCCCGTTGGAGTG										
Mus musculus	RefSeq	ILMN_220787	ILMN_220787	MADCAM1	NM_013591.1	NM_013591.1		17123	7305250	NM_013591.1	Madcam1	NP_038619.1	ILMN_2865448	003840711	S	1111	AATTCCTCCTCCACCGTCGTCCTATGGATTGGCAGCTTGGTGCTGGGGCT	10	+	79129515-79129515:79130982-79131030	10qC1	Mus musculus mucosal vascular addressin cell adhesion molecule 1 (Madcam1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC144710; MGC35998; AV211525; MGC144711	MGC144710; MGC35998; AV211525; MGC144711
Mus musculus	RefSeq	ILMN_221342	ILMN_256294	HOOK2	NM_133255.1	NM_133255.1		170833	18875435	NM_133255.1	Hook2	NP_573518.1	ILMN_1235962	006580129	S	2364	GCAGGTAGCAGGTGTGGAACTATTCCTTTTAGCAATGTGATTCTTCTTGA	8	+	87527034-87527083	8qC3	Mus musculus hook homolog 2 (Drosophila) (Hook2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]	MGC91008; MGC28586; A630054I03Rik	MGC91008; MGC28586; A630054I03Rik
Mus musculus	RefSeq	ILMN_198411	ILMN_312279	LOC665826	XR_030727.1	XR_030727.1		665826	149270256	XR_030727.1	LOC665826		ILMN_1237271	000610386	S	725	CGGGGAAGAAGGTGTCCTCGGCCCTAGCCGTCATCATTGTCGTCCAGAAA	19	-	3317514-3317563	19qA	PREDICTED: Mus musculus similar to Ribosomal protein L7a (LOC665826), misc RNA.					
Mus musculus	RefSeq	ILMN_198270	ILMN_198270	LOC381138	XM_358512.1	XM_358512.1			38083536	XM_358512.1	LOC381138		ILMN_1223741	005290091	S	496	GGACACCCTACCAGCAGAACAGGAGATGGAACACGGACAGTAACGAGGGG										
Mus musculus	RefSeq	ILMN_209865	ILMN_209865	2610024G14RIK	NM_019836.2	NM_019836.2		56412	118130590	NM_019836.2	2610024G14Rik	NP_062810.1	ILMN_2835461	002710270	S	2042	GAAGCCTCCGTCCCTGGTGCACAACCTGAAGAAGCACAGATGAGTGAGGC	5	-	77723377-77723384:77723385-77723426	5qC3.3	Mus musculus RIKEN cDNA 2610024G14 gene (2610024G14Rik), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	mAtNOS1; AtNOS1; AU022345	mAtNOS1; AtNOS1; AU022345
Mus musculus	RefSeq	ILMN_209865	ILMN_209865	2610024G14RIK	NM_019836.2	NM_019836.2		56412	118130590	NM_019836.2	2610024G14Rik	NP_062810.1	ILMN_1258552	001110477	S	1943	ACCTGAAGGGACTGCTCTGACTGTCCACCCCCCTGTCTTGCCATATATCG	5	-	77723476-77723525	5qC3.3	Mus musculus RIKEN cDNA 2610024G14 gene (2610024G14Rik), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	mAtNOS1; AtNOS1; AU022345	mAtNOS1; AtNOS1; AU022345
Mus musculus	Riken	ILMN_206374	ILMN_206374	4933401B08RIK	ri|4933401B08|PX00019K07|AK077074|1376					AK077074	4933401B08Rik		ILMN_1256988	004010703	S	1268	CCCGAGTTCTAATCGGAAGTCATAGTCGAGTTCGCATCTCGGGGATGTTG										
Mus musculus	RefSeq	ILMN_214358	ILMN_327461	LOC100044299	XM_001471746.1	XM_001471746.1		100044299	149260199	XM_001471746.1	LOC100044299	XP_001471796.1	ILMN_2772130	006130368	S	747	AACAGACCTTAAGGCTGATTGGGACCTGAGCCGAGAGAACTTGGTATTGG					PREDICTED: Mus musculus hypothetical protein LOC100044299 (LOC100044299), mRNA.					
Mus musculus	RefSeq	ILMN_224112	ILMN_238633	GLI1	NM_010296.2	NM_010296.2		14632	90186272	NM_010296.2	Gli1	NP_034426.2	ILMN_2774992	005670301	S	3599	TCCAGGAAAGAACAAACTTTAATAATGACACAGTTTCCTGACAATAAAGG	10	-	126766951-126767000	10qD3	Mus musculus GLI-Kruppel family member GLI1 (Gli1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IGI]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The developmental process by which the stucture of the notochord is destroyed in an embryo [goid 60032] [evidence IGI]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IGI]; The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate [goid 7418] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IGI]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	AV235269; Zfp-5; Zfp5	AV235269; Zfp-5; Zfp5
Mus musculus	MEEBO	ILMN_220125	ILMN_220125	PTGS2	scl019225.10_46	NM_011198.2			31981524	NM_011198.2	Ptgs2		ILMN_1231600	002490537	S	3823	CTGACCCAAGCATGTTATAAAGACTGACATTTTAGACATTTTGAAGGCCC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IGI]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence ISO]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O [goid 4666] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212684	ILMN_239978	MEX3C	NM_001039214.3	NM_001039214.3		240396	116174796	NM_001039214.3	Mex3c	NP_001034303.2	ILMN_2629183	002030537	S	2814	TATTTCCACTTGAAGAGTTACATTTCGTATAAAGTTTACAAATAACGGTT	18	+	73751682-73751731	18qE2	Mus musculus mex3 homolog C (C. elegans) (Mex3c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rkhd2; BM-013; A130001D14Rik; BC035207	Rkhd2; BM-013; A130001D14Rik; BC035207
Mus musculus	RefSeq	ILMN_239978	ILMN_239978	MEX3C	NM_001039214.3	NM_001039214.3		240396	116174796	NM_001039214.3	Mex3c	NP_001034303.2	ILMN_3117714	001010446	A	1248	CTGAGAGCATAGAACACCCACTTGCTCGAAGGGTGAGGAGTGACCCACCT	18	+	73750116-73750165	18qE2	Mus musculus mex3 homolog C (C. elegans) (Mex3c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rkhd2; BM-013; A130001D14Rik; BC035207	Rkhd2; BM-013; A130001D14Rik; BC035207
Mus musculus	Riken	ILMN_204741	ILMN_204741	1200011A11RIK	ri|B930037H14|PX00164A18|AK047228|1448					AK047228	1200011A11Rik		ILMN_2567274	006580086	S	1318	CAAGGCCTGGTATAGTACTTGGGACGCAGAGGCAGAGGCAGGCAGATCTC										
Mus musculus	RefSeq	ILMN_221602	ILMN_221602	PDK2	NM_133667.1	NM_133667.1		18604	19526815	NM_133667.1	Pdk2	NP_598428.1	ILMN_2737658	005890139	S	1862	TAGCGATTCTCACCCGGGGCCCACCGAGAGGGCAGGCCTAGGAGTAAGCT	11	-	94887875-94887924	11qD	Mus musculus pyruvate dehydrogenase kinase, isoenzyme 2 (Pdk2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The posttranslational phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine) [goid 18106] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine [goid 4673] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate dehydrogenase (acetyl-transferring) = ADP + pyruvate dehydrogenase (acetyl-transferring) phosphate [goid 4740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210602	ILMN_210602	OLFR1402	NM_146275.1	NM_146275.1		258272	22129732	NM_146275.1	Olfr1402	NP_666387.1	ILMN_1257769	000610519	S	904	GGTGCGCTGAGAAAACTGACTGGAGTGCCTTCCTTAACAATAGCAGTGGC	3	-	97214149-97214198	3qF2.1	Mus musculus olfactory receptor 1402 (Olfr1402), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR217-1; MGC123878; MGC123879	MOR217-1; MGC123878; MGC123879
Mus musculus	Riken	ILMN_203420	ILMN_203420	RAB23	ri|B230202K21|PX00069F21|AK045454|1088					AK045454	Rab23		ILMN_2557166	005550324	S	806	TGGAGGCTGAGATAGGGCTACCCAGGTTCTGGGCCAGCTTGGGCTACATA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45861] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199047	ILMN_199047	LOC380644	XM_354553.1	XM_354553.1			38090588	XM_354553.1	LOC380644		ILMN_1234321	000650546	S	291	CGAGTTGCTGACACTTTTCAGGCAGTAGTAATGTTGGGGATACACTCCCC										
Mus musculus	RefSeq	ILMN_220727	ILMN_256636	LOC676708	XM_992322.2	XM_992322.2		676708	149275083	XM_992322.2	LOC676708	XP_997416.2	ILMN_2725914	006900592	S	1009	AAAGTAAGAGACAACCCTCAGGATCCAGGCAGAGACAGCGCCCAGAGCTC					PREDICTED: Mus musculus similar to class I (Qa) Q2k antigen (LOC676708), mRNA.					
Mus musculus	RefSeq	ILMN_195854	ILMN_195854	VPS45	NM_013841.2	NM_013841.2		22365	142367309	NM_013841.2	Vps45	NP_038869.1	ILMN_2519345	001580368	S	2397	AAACAGAAGATGAGATGGCAGTGGAGAGCGGCGAGAATGTCATGGCCTCC	3	-	95803934-95803983	3qF2.1	Mus musculus vacuolar protein sorting 45 (yeast) (Vps45), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mVps45; AW554165; AI462172	mVps45; AW554165; AI462172
Mus musculus	RefSeq	ILMN_185574	ILMN_328829	LOC100048514	XR_034737.1	XR_034737.1		100048514	149269511	XR_034737.1	LOC100048514		ILMN_2770052	006620408	S	1366	AAGGAAAATATTCACTATATGTCTGTCATTCTTTTTCAAATAAAAAATTT					PREDICTED: Mus musculus similar to Dynein cytoplasmic 2 light intermediate chain 1 (LOC100048514), misc RNA.					
Mus musculus	RefSeq	ILMN_185574	ILMN_328829	LOC100048514	XR_034737.1	XR_034737.1		100048514	149269511	XR_034737.1	LOC100048514		ILMN_1243833	004480168	S	1273	GGCAACATGTGAAGAAAGTTGAGCATATAACCTGTTAGGGAAAATCTGTT					PREDICTED: Mus musculus similar to Dynein cytoplasmic 2 light intermediate chain 1 (LOC100048514), misc RNA.					
Mus musculus	RefSeq	ILMN_215998	ILMN_215998	DPP10	NM_199021.2	NM_199021.2		269109	46048413	NM_199021.2	Dpp10	NP_950186.2	ILMN_2666205	000580209	S	4035	TCACAGCCTAAATCTGATCTTTGGGAAAGCTGGGTTTCTCTGTCCTCTGA	1	-	125229253-125229302	1qE2.3	Mus musculus dipeptidylpeptidase 10 (Dpp10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [evidence ISO]	DPRP3; 6430601K09Rik	DPRP3; 6430601K09Rik
Mus musculus	RefSeq	ILMN_212608	ILMN_212608	CCDC45	NM_177088.2	NM_177088.2		320162	142351923	NM_177088.2	Ccdc45	NP_796062.1	ILMN_1246221	003780524	S	2313	GCTAGCAGAAGCCATCTCACAGGAACGTCAAGAACTCAAAGTGAGACAGA	11	+	106679518-106679567	11qE1	Mus musculus coiled-coil domain containing 45 (Ccdc45), mRNA.				4732496G21Rik; F630025I20Rik; D330027A14Rik; AI448335	4732496G21Rik; F630025I20Rik; D330027A14Rik; AI448335
Mus musculus	MEEBO	ILMN_219600	ILMN_219600	F730043H23	scl42631.3.1_55				51766801	XM_484115	F730043H23		ILMN_2711026	001770678	S	2350	CCAGTCATCGAACAACTCCTGTCCCCAAGGAGGAGCAGACGTGACATGAG										
Mus musculus	RefSeq	ILMN_227636	ILMN_227636	CXADR	NM_001025192.2	NM_001025192.2		13052	110347539	NM_001025192.2	Cxadr	NP_001020363.1	ILMN_3089725	001110082	A	982	GTGCCTCCTCCAAAGAGTCGGACATCCACTGCCAGGAGCTATATTGGCAG	16	+	78336440-78336489	16qC3.1	Mus musculus coxsackie virus and adenovirus receptor (Cxadr), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle fiber over time, from its formation to the mature structure [goid 48739] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU016810; CAR; MCAR; AW553441; 2610206D03Rik; MCVADR	AU016810; CAR; MCAR; AW553441; 2610206D03Rik; MCVADR
Mus musculus	RefSeq	ILMN_227636	ILMN_227636	CXADR	NM_001025192.2	NM_001025192.2		13052	110347539	NM_001025192.2	Cxadr	NP_001020363.1	ILMN_3018017	005810414	I	5267	CACAGGTGCTGAGAAGGACCACAGTTCACCAACTGACTTATTCTTGTCCC	16	+	78340725-78340774	16qC3.1	Mus musculus coxsackie virus and adenovirus receptor (Cxadr), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle fiber over time, from its formation to the mature structure [goid 48739] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU016810; CAR; MCAR; AW553441; 2610206D03Rik; MCVADR	AU016810; CAR; MCAR; AW553441; 2610206D03Rik; MCVADR
Mus musculus	RefSeq	ILMN_208845	ILMN_208845	RGR	NM_021340.2	NM_021340.2		57811	31981123	NM_021340.2	Rgr	NP_067315.1	ILMN_2590090	001710086	S	1492	ATACAAATTGGACAAGAGCATGCAGGTTAGGTGTCCCCTGACCACCAGCA	14	-	35948848-35948897	14qB	Mus musculus retinal G protein coupled receptor (Rgr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208845	ILMN_208845	RGR	NM_021340.2	NM_021340.2		57811	31981123	NM_021340.2	Rgr	NP_067315.1	ILMN_2957721	001690746	S	1411	TGTAATGACACCAGTGACTTATTCTGCTCCTTGCTCTATGTCCCTTAGTG	14	-	35948929-35948978	14qB	Mus musculus retinal G protein coupled receptor (Rgr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210653	ILMN_313100	LOC100047323	XR_033441.1	XR_033441.1		100047323	149254365	XR_033441.1	LOC100047323		ILMN_1241944	000840253	S	1069	CCGTCTCACCCCTCTGCTCATGGTTCTCCAGCTCCTGTCTCTACTATGCC					PREDICTED: Mus musculus similar to ataxin 2 (LOC100047323), misc RNA.					
Mus musculus	RefSeq	ILMN_210653	ILMN_313100	LOC100047323	XR_033441.1	XR_033441.1		100047323	149254365	XR_033441.1	LOC100047323		ILMN_1235437	004830168	S	3422	GGCATGTAGGGACTTGTGGCTGTTCCATAATTCCATGTGCTGTTGCAGGG					PREDICTED: Mus musculus similar to ataxin 2 (LOC100047323), misc RNA.					
Mus musculus	RefSeq	ILMN_218280	ILMN_218280	SLCO6D1	XM_129964.3	XM_129964.3		70866	94363832	XM_129964.3	Slco6d1	XP_129964.1	ILMN_2693887	003460445	S	1954	GGGTATTAATGAATGTGGAGAAAAAGTACGGTGTTGGATCTATAATACAG	1	+	100396394-100396443	1qD	PREDICTED: Mus musculus solute carrier organic anion transporter family, member 6d1, transcript variant 1 (Slco6d1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_184480	ILMN_184480	6530406A20RIK	scl42010.1_83						6530406A20Rik		ILMN_1217148	000290239	S	1	GTGGGAGGACTGGCGAAGATATGAGCTAGCACACAGCTCCCAGAGCAACA										
Mus musculus	RefSeq	ILMN_218053	ILMN_218053	OLFR601	NM_146314.1	NM_146314.1		258311	22129660	NM_146314.1	Olfr601	NP_666426.1	ILMN_1256141	003870551	S	870	CCCCATTGTTTATGGTGTTAGGACCAAGAAAATTCGAGATTATGTTCTTA	7	-	110506787-110506836	7qE3	Mus musculus olfactory receptor 601 (Olfr601), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR24-3	MOR24-3
Mus musculus	MEEBO	ILMN_186513	ILMN_186513	WDR22	scl42293.9_384				31542047	NM_177267	Wdr22		ILMN_1246452	002570327	S	20	AGGAGTCTCGTGTTGTCTGTCAAGGTGCCTTCCTCTGCTGAAGCCTTACC										
Mus musculus	MEEBO	ILMN_192879	ILMN_192879	A930038D23RIK	scl077824.1_168						A930038D23Rik		ILMN_2492181	004040543	S	5	TGTGTTCAGGGGGCCCAACCTCAAGGTATTGGGAGATGCTAGGTCTCTAG										
Mus musculus	RefSeq	ILMN_217679	ILMN_217679	TBCC	NM_178385.3	NM_178385.3		72726	87044900	NM_178385.3	Tbcc	NP_848472.2	ILMN_2839588	003850576	S	1698	TCTGCACCACACCCTGCTCATGTTTCTTTTCCCTCAAGAGCTACAAGGCC	17	+	47029267-47029316	17qC	Mus musculus tubulin-specific chaperone c (Tbcc), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC103238; 2810055C19Rik	MGC103238; 2810055C19Rik
Mus musculus	RefSeq	ILMN_212434	ILMN_212434	NOMO1	NM_153057.3	NM_153057.3		211548	141802551	NM_153057.3	Nomo1	NP_694697.2	ILMN_2626389	004480228	S	3771	GTGTTGGTGTCCTGCCTGTCTGTCCTCTCCTGTGTAGCCCTGTGGTGCAA	7	+	53339216-53339265	7qB4	Mus musculus nodal modulator 1 (Nomo1), mRNA.				MGC37848; pM5; MGC37454; D7Ertd156e; Nomo	MGC37848; pM5; MGC37454; D7Ertd156e; Nomo
Mus musculus	RefSeq	ILMN_209879	ILMN_209879	ORC4L	NM_011958.3	NM_011958.3		26428	124286817	NM_011958.3	Orc4l	NP_036088.3	ILMN_2689513	006130441	S	1392	TATGAATGCTCTACAGAAATACTCCAACTGCCCTACAGATGTTAGGCAGT	2	-	48760959-48761008	2qC1.1	Mus musculus origin recognition complex, subunit 4-like (S. cerevisiae) (Orc4l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	mMmORC4; Orc4; Orc4P	mMmORC4; Orc4; Orc4P
Mus musculus	RefSeq	ILMN_209879	ILMN_209879	ORC4L	NM_011958.3	NM_011958.3		26428	124286817	NM_011958.3	Orc4l	NP_036088.3	ILMN_2600085	007210164	S	3877	GGGAGATACGGGTTGAGACTGCATAAAAAACGTACTGCTGGTTGAATATC	2	-	48758474-48758523	2qC1.1	Mus musculus origin recognition complex, subunit 4-like (S. cerevisiae) (Orc4l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	mMmORC4; Orc4; Orc4P	mMmORC4; Orc4; Orc4P
Mus musculus	RefSeq	ILMN_212233	ILMN_212233	B630005N14RIK	NM_175312.3	NM_175312.3		101148	141802979	NM_175312.3	B630005N14Rik	NP_780521.1	ILMN_1230054	002510575	S	3508	CTCAGATTAAAACTTACACCAATACATATTCCACAGGCCAGTTCCATGTG	6	-	13576258-13576307	6qA1	Mus musculus RIKEN cDNA B630005N14 gene (B630005N14Rik), mRNA.				AI666701	AI666701
Mus musculus	RefSeq	ILMN_189476	ILMN_189476	TRHR2	NM_133202.2	NM_133202.2		170732	118131032	NM_133202.2	Trhr2	NP_573465.1	ILMN_2461612	006130037	S	1043	ACGTGCAGCATGCGCCCCCACCAGCAACTACAGTGCTGCCCAGGAGACCT	8	-	124881114-124881163	8qE1	Mus musculus thyrotropin releasing hormone receptor 2 (Trhr2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TRH-R2	TRH-R2
Mus musculus	RefSeq	ILMN_221663	ILMN_221663	CBLC	NM_023224.4	NM_023224.4		80794	141802419	NM_023224.4	Cblc	NP_075713.2	ILMN_2738699	004780050	S	1344	ACTACTCCCTGAAGATCAGTTCCCTCAGGGACCCCAAGACAAAGGCTGGC	7	-	20370159-20370208	7qA3	Mus musculus Casitas B-lineage lymphoma c (Cblc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence ISO]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISO]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC117886; 2310079L19Rik; Cbl3; 2310076I21Rik	MGC117886; 2310079L19Rik; Cbl3; 2310076I21Rik
Mus musculus	RefSeq	ILMN_216650	ILMN_216650	1700020O03RIK	NM_027405.2	NM_027405.2		70373	42475993	NM_027405.2	1700020O03Rik	NP_081681.2	ILMN_2673628	005910056	S	3810	TCAAGTTTTGTTGTCAGTATTGAAGATCACCTGCAGCCCTTAAAGATGGC	12	+	87632209-87632258	12qD2	Mus musculus RIKEN cDNA 1700020O03 gene (1700020O03Rik), mRNA.				4732487G21Rik; A630090I05Rik	4732487G21Rik; A630090I05Rik
Mus musculus	RefSeq	ILMN_260947	ILMN_260947	TDG	NM_011561.1	NM_011561.1		21665	6755753	NM_011561.1	Tdg	NP_035691.1	ILMN_3102643	004780671	A	1718	GGTGAAAGCAGATGTGCCTATCTCTGTTGGAAGCCGACTAACCCTCCGCC	10	+	82111881-82111930	10qC1	Mus musculus thymine DNA glycosylase (Tdg), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with the small ubiquitin-like protein SUMO [goid 32183] [evidence IPI]	JZA-3; Jza1; E130317C12Rik	JZA-3; Jza1; E130317C12Rik
Mus musculus	RefSeq	ILMN_244895	ILMN_244895	ZFP583	NM_001033249.1	NM_001033249.1		213011	85701749	NM_001033249.1	Zfp583	NP_001028421.1	ILMN_3055220	004060497	I	480	GCAGTGGCTGAGTGACACACAGAGAGATTTGTACAGGAAGGTGACATTGG	7	-	5928564-5928613	7qA1	Mus musculus zinc finger protein 583 (Zfp583), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BC056221; Znf583	BC056221; Znf583
Mus musculus	RefSeq	ILMN_209318	ILMN_209318	B2M	NM_009735.2	NM_009735.2		12010	31981889	NM_009735.2	B2m	NP_033865.2	ILMN_2739999	006110736	S	322	TCACCCCCACTGAGACTGATACATACGCCTGCAGAGTTAAGCATGCCAGT	2	+	121842517-121842566	2qE5	Mus musculus beta-2 microglobulin (B2m), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class Ib molecule. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family [goid 2481] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [evidence IMP]; A defense response that is mediated by cells [goid 6968] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ly-m11; beta2-m	Ly-m11; beta2-m
Mus musculus	RefSeq	ILMN_209318	ILMN_209318	B2M	NM_009735.2	NM_009735.2		12010	31981889	NM_009735.2	B2m	NP_033865.2	ILMN_1216746	005570253	S	321	TTCACCCCCACTGAGACTGATACATACGCCTGCAGAGTTAAGCATGCCAG	2	+	121842516-121842565	2qE5	Mus musculus beta-2 microglobulin (B2m), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class Ib molecule. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family [goid 2481] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [evidence IMP]; A defense response that is mediated by cells [goid 6968] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ly-m11; beta2-m	Ly-m11; beta2-m
Mus musculus	Riken	ILMN_205657	ILMN_205657	SCGN10	ri|A730069C18|PX00151L08|AK043202|3414					AK043202	Scgn10		ILMN_1228563	000870347	S	3291	TTGAGAAACATCACGAAGGCCAGGGAGGCAAGAGCAGTGAGCACGGGAGG										
Mus musculus	RefSeq	ILMN_199342	ILMN_246766	MRPPLF4	XM_001005014.1	XM_001005014.1		107849	94420009	XM_001005014.1	Mrpplf4	XP_001005014.1	ILMN_1219870	003360039	S	793	CACTACAATGCCTAAGTACCTGAGCAGGGTGTTGTTACCACCATCATTCC				13qA1	PREDICTED: Mus musculus mitogen regulated protein, proliferin 4 (Mrpplf4), mRNA.					
Mus musculus	Riken	ILMN_207260	ILMN_207260	G630022F09RIK	ri|G630022F09|PL00012J24|AK090228|3289					AK090228	G630022F09Rik		ILMN_2586252	004570274	S	2830	ATCCAAACATCTGAGCATGGGGTGGGAAGGGAGTGGGCAGGCAGGCCAGA										
Mus musculus	MEEBO	ILMN_192493	ILMN_192493	RIMS3	scl25010.7_694				33859822	NM_182929	Rims3		ILMN_2488599	004570672	S	6	GTCCTTGCCAATCCCCCTGAGGAGAAAATTCTTCACATGGCTTCTGCATG						A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]			
Mus musculus	RefSeq	ILMN_212991	ILMN_212991	OLFR1111	NM_146593.1	NM_146593.1		258586	22129460	NM_146593.1	Olfr1111	NP_666804.1	ILMN_2632379	002100348	S	779	TGCGTCCCACCACTAGCTATTCCCCAGACACTGATAAGGTAGTTGCTTTG	2	-	86989988-86990037	2qD	Mus musculus olfactory receptor 1111 (Olfr1111), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR181-2; MGC123583	MOR181-2; MGC123583
Mus musculus	RefSeq	ILMN_212320	ILMN_212320	CDKAL1	NM_144536.2	NM_144536.2		68916	118130026	NM_144536.2	Cdkal1	NP_653119.1	ILMN_2691878	005290673	S	1388	CTAGTCACTGAAGAGTCTTTTGACTCCAAGTTTTATGTTGCTCATAACCG	13	-	29449381-29449430	13qA3.1-qA3.2	Mus musculus CDK5 regulatory subunit associated protein 1-like 1 (Cdkal1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	6620401C13Rik; 1190005B03Rik; RP23-202F3.2	6620401C13Rik; 1190005B03Rik; RP23-202F3.2
Mus musculus	RefSeq	ILMN_221655	ILMN_221655	HRC	NM_010473.2	NM_010473.2		15464	133778930	NM_010473.2	Hrc	NP_034603.2	ILMN_1259206	003890288	S	2370	CCCTGACCTGGCCGCCTGGCAAGAGCTGCATCTATTTCTTTGAATAAATG	7	+	52594282-52594287:52594288-52594331	7qB4	Mus musculus histidine rich calcium binding protein (Hrc), mRNA.	The lipid bilayer surrounding the sarcoplasmic reticulum [goid 33017] [evidence IDA]	The regulation of the levels, transport, and metabolism of calcium ions [goid 55074] [evidence IDA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IDA]			
Mus musculus	RefSeq	ILMN_213040	ILMN_213040	CDKN2C	NM_007671.2	NM_007671.2		12580	31982862	NM_007671.2	Cdkn2c	NP_031697.1	ILMN_1215651	004070762	S	93	GCTCTACTCCAGATTAACCATCCCAGTCCTTCTGTCAGCCTCCGATGCCA	4	-	109337835-109337884	4qC7	Mus musculus cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) (Cdkn2c), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	INK4d; C77269; INK4c; p18INK4c; p18	INK4d; C77269; INK4c; p18INK4c; p18
Mus musculus	RefSeq	ILMN_213040	ILMN_213040	CDKN2C	NM_007671.2	NM_007671.2		12580	31982862	NM_007671.2	Cdkn2c	NP_031697.1	ILMN_1228366	007150528	S	634	GGGGGACACCGCCTTCGACTTGGCCAGGTTCTATGGAAGAAATGAGGTCA	4	-	109333903-109333952	4qC7	Mus musculus cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) (Cdkn2c), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	INK4d; C77269; INK4c; p18INK4c; p18	INK4d; C77269; INK4c; p18INK4c; p18
Mus musculus	MEEBO	ILMN_189048	ILMN_189048	TRIB1	scl47164.1_185				31543890	NM_144549	Trib1		ILMN_2457892	006330682	S	10	GGTCATTCTATTCACTGCCAGGGATACCATCTGCACGCGGACAAGGTCGC							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200319	ILMN_200319	LOC386222	XM_359124.1	XM_359124.1			38081302	XM_359124.1	LOC386222		ILMN_1226893	000520747	S	25	CCAAACTTTGTCTCTAACTCCTTCCAACCACTCTGGAAATCAGTCTGGCG										
Mus musculus	RefSeq	ILMN_220796	ILMN_220796	DYNLT3	NM_025975.5	NM_025975.5		67117	146134975	NM_025975.5	Dynlt3	NP_080251.3	ILMN_1216559	001740280	S	2064	GGCTCATTTTCAAAGTATCAAATCATACCTCGTGAGCTTGCTATCTGCTG				XqA1.1	Mus musculus dynein light chain Tctex-type 3 (Dynlt3), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU042796; Tcte1l; 2310075M16Rik	AU042796; Tcte1l; 2310075M16Rik
Mus musculus	RefSeq	ILMN_212949	ILMN_212949	GULO	NM_178747.2	NM_178747.2		268756	31343390	NM_178747.2	Gulo	NP_848862.1	ILMN_2631948	006650674	S	1662	AGAAGTGGCCTCTCACTCAAATTCCTGTTTGCATCTCCACGAGCCATACA	14	-	64941450-64941499	14qD1	Mus musculus gulonolactone (L-) oxidase (Gulo), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions [goid 19853] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-arabinono-1,4-lactone + O2 = D-erythro-ascorbate + H2O2 [goid 3885] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an oxygen molecule [goid 16899] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: L-gulono-1,4-lactone + O2 = L-xylo-hex-3-ulonolactone + H2O2 [goid 50105] [evidence IEA]	MGC29968; unhip; unh; BC028822; 5730581M22; sfx; MGC37793; MGC37880; AU018375	MGC29968; unhip; unh; BC028822; 5730581M22; sfx; MGC37793; MGC37880; AU018375
Mus musculus	RefSeq	ILMN_213195	ILMN_213195	ANKLE2	NM_027922.1	NM_027922.1		71782	40789238	NM_027922.1	Ankle2	NP_082198.1	ILMN_2737158	001050709	S	4973	GAGTTTTACCCGAGCCATCTTGCTCGCCCATTTTAAACCCTAAGCTGCCT	5	+	110685424-110685473	5qF	Mus musculus ankyrin repeat and LEM domain containing 2 (Ankle2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]			AI661024; 1110001J12Rik	AI661024; 1110001J12Rik
Mus musculus	RefSeq	ILMN_213195	ILMN_213195	ANKLE2	NM_027922.1	NM_027922.1		71782	40789238	NM_027922.1	Ankle2	NP_082198.1	ILMN_2693803	001170730	S	3158	CATGAAAGAATGTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGG	5	+	110683609-110683658	5qF	Mus musculus ankyrin repeat and LEM domain containing 2 (Ankle2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]			AI661024; 1110001J12Rik	AI661024; 1110001J12Rik
Mus musculus	RefSeq	ILMN_213195	ILMN_213195	ANKLE2	NM_027922.1	NM_027922.1		71782	40789238	NM_027922.1	Ankle2	NP_082198.1	ILMN_2916686	003360246	S	4979	TACCCGAGCCATCTTGCTCGCCCATTTTAAACCCTAAGCTGCCTTTGGAC	5	+	110685430-110685479	5qF	Mus musculus ankyrin repeat and LEM domain containing 2 (Ankle2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]			AI661024; 1110001J12Rik	AI661024; 1110001J12Rik
Mus musculus	RefSeq	ILMN_213195	ILMN_213195	ANKLE2	NM_027922.1	NM_027922.1		71782	40789238	NM_027922.1	Ankle2	NP_082198.1	ILMN_2634612	005360598	S	899	GCTGCCAAGTTGATCAAAGGGTCCCGGTTTAAAGCTTTTCGAACAAGAGA	5	+	110665333-110665382	5qF	Mus musculus ankyrin repeat and LEM domain containing 2 (Ankle2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]			AI661024; 1110001J12Rik	AI661024; 1110001J12Rik
Mus musculus	RefSeq	ILMN_188173	ILMN_244414	4933427G23RIK	XR_005167.1	XR_005167.1		330053	94374283	XR_005167.1	4933427G23Rik		ILMN_1223907	003520487	S	538	TACAATGAGGAGCGCGATGACTTTGAGTCTTCTTGTCCTGGCTTCTCAGC				5qA3	PREDICTED: Mus musculus RIKEN cDNA 4933427G23 gene (4933427G23Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_199327	ILMN_199327	LOC235966	XM_142538.2	XM_142538.2			38095700	XM_142538.2	LOC235966		ILMN_2534848	006450608	S	267	TGGCACCTCTTTGGATGGCCTACATATGAACATCCAGCTTGCCACAACAC										
Mus musculus	RefSeq	ILMN_235821	ILMN_235821	V1RC29	NM_134184.2	NM_134184.2		171202	110611911	NM_134184.2	V1rc29	NP_598945.2	ILMN_2891481	004900487	S	647	GGCACCTGAGAGCATCACCTGAGAAAAGAGCCACCCAGACCATCTTACTG	6	-	57272933-57272982	6qB3	Mus musculus vomeronasal 1 receptor, C29 (V1rc29), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_197457	ILMN_313166	OTTMUSG00000019524	NM_001099324.1	NM_001099324.1		100041724	150010675	NM_001099324.1	OTTMUSG00000019524	NP_001092794.1	ILMN_1227493	007400192	S	382	ATCTCTTCCTCCACAGGGCTGAGGCGCTGCCACTCCACAACAGGGCACGT				14qC1	Mus musculus predicted gene, OTTMUSG00000019524 (OTTMUSG00000019524), mRNA.					
Mus musculus	RefSeq	ILMN_210480	ILMN_210480	PLA2G4A	NM_008869.3	NM_008869.3		18783	133891677	NM_008869.3	Pla2g4a	NP_032895.1	ILMN_2606027	001450653	S	2570	AACAGTTTCTGACAGTATGAATTTTTTGACATTAGCATAGAGCTATATAC	1	-	151676978-151677027	1qG1	Mus musculus phospholipase A2, group IVA (cytosolic, calcium-dependent) (Pla2g4a), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]	Catalysis of the hydrolysis of a glycerophospholipid [goid 4620] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Pla2g4; cPLA2	Pla2g4; cPLA2
Mus musculus	RefSeq	ILMN_243966	ILMN_243966	METTL7A2	NM_199477.2	NM_199477.2		393082	61098177	NM_199477.2	Mettl7a2	NP_955771.2	ILMN_2991019	002570112	S	1460	GAGTGGTTGGTGGCAGAGCCTCAATCCCAGCTCTCAGGTGGCAGAGGTAG	15	+	100191931-100191980	15qF1	Mus musculus methyltransferase like 7A2 (Mettl7a2), mRNA.				UbiE2; Gm921	UbiE2; Gm921
Mus musculus	RefSeq	ILMN_217297	ILMN_251267	CCDC23	NM_001038998.1	NM_001038998.1		69216	84872228	NM_001038998.1	Ccdc23	NP_001034087.1	ILMN_2681604	005720630	S	478	AGCCTGCATCCCCGGCAGAGGAACTGGTGCCTGCCTTTGTCTGTGAGCTC	4	+	118873592-118873641	4qD2.1	Mus musculus coiled-coil domain containing 23 (Ccdc23), transcript variant 1, mRNA.				RP23-344D2.7; AI851162; 2410005K17Rik	RP23-344D2.7; AI851162; 2410005K17Rik
Mus musculus	RefSeq	ILMN_259151	ILMN_259151	PKN2	NM_178654.2	NM_178654.2		109333	31340959	NM_178654.2	Pkn2	NP_848769.1	ILMN_2972239	001990370	S	3301	GACCAAGCAGACTGACCAACAAGAAGACCTCTTGAAAACAGCAGCCCTGC	3	-	142731130-142731179	3qH1	Mus musculus protein kinase N2 (Pkn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	6030436C20Rik; Prkcl2; Stk7; AI507382; PRK2	6030436C20Rik; Prkcl2; Stk7; AI507382; PRK2
Mus musculus	MEEBO	ILMN_185198	ILMN_185198	IGHV1S41_X06868_IG_HEAVY_VARIABLE_1S41_72	IGHV1S41_X06868_Ig_heavy_variable_1S41_72						IGHV1S41_X06868_Ig_heavy_variable_1S41_72		ILMN_2424996	006900348	S	17	AGAGGCCTGGACAGGGCCTTGAGTGGATAGGCGCTATTGCTCCTGGAAGT										
Mus musculus	RefSeq	ILMN_220453	ILMN_220453	HIST1H3C	NM_175653.1	NM_175653.1		319148	30089711	NM_175653.1	Hist1h3c	NP_783584.1	ILMN_1229755	004860209	S	405	CGCCCGCCGCATCCGCGGAGAGAGGGCATAATGGTTTTTATGCTATTTAA	13	-	23836936-23836955:23836956-23836985	13qA3.1	Mus musculus histone cluster 1, H3c (Hist1h3c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H3-143	H3-143
Mus musculus	RefSeq	ILMN_209393	ILMN_209393	RNF31	NM_194346.2	NM_194346.2		268749	40254408	NM_194346.2	Rnf31	NP_919327.2	ILMN_2595387	004260730	S	3100	CCTCATCAATGCCCATTCACTGGACCCAGCTACCTTGTATGAAGTGGAGG	14	+	56214773-56214801:56214844-56214864	14qC3	Mus musculus ring finger protein 31 (Rnf31), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HOIP; Paul; BC031509; mFLJ00217; AL033293; Flj10111	HOIP; Paul; BC031509; mFLJ00217; AL033293; Flj10111
Mus musculus	RefSeq	ILMN_221321	ILMN_221321	AATK	NM_007377.3	NM_007377.3		11302	118130971	NM_007377.3	Aatk	NP_031403.2	ILMN_1231439	006940196	S	5186	GTTTGAGGCTTAGGATGGACGCTGGTGCAATGATTTTCTTGTTCCTTGTT	11	-	119868655-119868704	11qE2	Mus musculus apoptosis-associated tyrosine kinase (Aatk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence ISS]	aatyk1; mKIAA0641; AATYK	aatyk1; mKIAA0641; AATYK
Mus musculus	RefSeq	ILMN_214140	ILMN_214140	D19ERTD737E	NM_029648.3	NM_029648.3		76539	31340923	NM_029648.3	D19Ertd737e	NP_083924.2	ILMN_2644708	006100164	S	384	ACCGGGTGAGTGCCGCCGAGTTCCAGGTTGTCCGTGCGGGAAGGGGTGTG	19	-	60280927-60280976	19qD3	Mus musculus DNA segment, Chr 19, ERATO Doi 737, expressed (D19Ertd737e), mRNA.				2610015K05Rik; 2310065H12Rik	2610015K05Rik; 2310065H12Rik
Mus musculus	RefSeq	ILMN_214140	ILMN_214140	D19ERTD737E	NM_029648.3	NM_029648.3		76539	31340923	NM_029648.3	D19Ertd737e	NP_083924.2	ILMN_2888572	000730195	S	1982	CCCCTGTCACTCCTTGGAGGATGGAATGAATTAATGAGACAAAAGAGAGA	19	-	60253252-60253301	19qD3	Mus musculus DNA segment, Chr 19, ERATO Doi 737, expressed (D19Ertd737e), mRNA.				2610015K05Rik; 2310065H12Rik	2610015K05Rik; 2310065H12Rik
Mus musculus	RefSeq	ILMN_209073	ILMN_209073	PQLC1	NM_025861.2	NM_025861.2		66943	142382679	NM_025861.2	Pqlc1	NP_080137.1	ILMN_2592266	006270131	S	2187	CCTCGGATATTCTAAGTTGTGTGAGCGAGATTCTTGCTTACTCTTTGGCC	18	+	80489284-80489333	18qE3	Mus musculus PQ loop repeat containing 1 (Pqlc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C78974; 5730564E11Rik; 2310009N05Rik; 4933425L21Rik	C78974; 5730564E11Rik; 2310009N05Rik; 4933425L21Rik
Mus musculus	RefSeq	ILMN_212811	ILMN_212811	FSCN1	NM_007984.2	NM_007984.2		14086	113680347	NM_007984.2	Fscn1	NP_032010.2	ILMN_2630605	004540221	S	2276	AAGGCCCTAGGCAAGCCTGCCCTGTTGGTTGTAGTCGTGAGTGGTCTTGG	5	+	143734477-143734526	5qG2	Mus musculus fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus) (Fscn1), mRNA.	Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IEA]	Fan1; AI663989	Fan1; AI663989
Mus musculus	RefSeq	ILMN_213101	ILMN_213101	NOL11	NM_133702.1	NM_133702.1		68979	19526871	NM_133702.1	Nol11	NP_598463.1	ILMN_2925675	004280564	S	2830	TCAGTCGGAAGCTGTTCCCAGTCATCTGTATCATGGAGCACTCAGGGCAC	11	-	107028134-107028183	11qE1	Mus musculus nucleolar protein 11 (Nol11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AU015220; AU019874; 1500002M01Rik	AU015220; AU019874; 1500002M01Rik
Mus musculus	RefSeq	ILMN_216673	ILMN_230376	CDV3	NM_175565.3	NM_175565.3		321022	145301557	NM_175565.3	Cdv3	NP_780774.1	ILMN_2673894	003360452	S	3720	GCTTCACTCCAGCGTGACACACAAACACAGATTCTGTTTGGGGTTATGGT				9qF1	Mus musculus carnitine deficiency-associated gene expressed in ventricle 3 (Cdv3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			2510010F10Rik; TPP36; C230084J24Rik; C79446	2510010F10Rik; TPP36; C230084J24Rik; C79446
Mus musculus	RefSeq	ILMN_193791	ILMN_313461	1500011B03RIK	XM_001478355.1	XM_001478355.1		66236	149254371	XM_001478355.1	1500011B03Rik	XP_001478405.1	ILMN_2500434	004180487	S	1002	ACGGGTGGCAACCTGAGACTTAGGACTTAGTCTCCCTTTCTCCCTAGGTG				5qF	PREDICTED: Mus musculus RIKEN cDNA 1500011B03 gene, transcript variant 2 (1500011B03Rik), mRNA.					
Mus musculus	Riken	ILMN_204249	ILMN_204249	C030038O19RIK	ri|A830084E21|PX00156H15|AK044049|1971					AK044049	C030038O19Rik		ILMN_2563533	005050209	S	1623	GCTGTGTATACTATGTTCCTACCAGCTACTGTGGTCTTCCCAGCCCAGTG										
Mus musculus	RefSeq	ILMN_256468	ILMN_256468	VEPH1	NM_145820.1	NM_145820.1		72789	41281745	NM_145820.1	Veph1	NP_665819.1	ILMN_3082949	003460390	A	2660	CTCAGCAAGGTACAGAGCGTGAAAGCTGTGGCTAAGAAACGCCGGGACCG	3	-	65861183-65861232	3qE1	Mus musculus ventricular zone expressed PH domain homolog 1 (zebrafish) (Veph1), transcript variant Veph-A, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Veph; 2810471M23Rik	Veph; 2810471M23Rik
Mus musculus	RefSeq	ILMN_256468	ILMN_256468	VEPH1	NM_145820.1	NM_145820.1		72789	41281745	NM_145820.1	Veph1	NP_665819.1	ILMN_3012325	006040451	I	2048	GCCTTGGAAATCGCAAAAAAGGTCCCAATCCCAGACCAGTGCACCATCGA	3	-	65961833-65961882	3qE1	Mus musculus ventricular zone expressed PH domain homolog 1 (zebrafish) (Veph1), transcript variant Veph-A, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Veph; 2810471M23Rik	Veph; 2810471M23Rik
Mus musculus	RefSeq	ILMN_216692	ILMN_216692	PKIA	NM_008862.3	NM_008862.3		18767	113865954	NM_008862.3	Pkia	NP_032888.1	ILMN_2674122	003370025	S	3338	GCCCACTGTTCACACCCTACCACTGAGTCTTCCTTAAATGTGACATCAAG	3	+	7445021-7445070	3qA1	Mus musculus protein kinase inhibitor, alpha (Pkia), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of proteins from the cytoplasm into the nucleus [goid 42308] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops or reduces the activity of an enzyme [goid 43086] [evidence IDA]; Any process that modulates the rate or extent of progression from G2 phase to M phase of the mitotic cell cycle [goid 10389] [evidence IMP]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IDA]	PKIalpha; AI415001	PKIalpha; AI415001
Mus musculus	RefSeq	ILMN_241801	ILMN_241801	EG432939	NM_001013791.1	NM_001013791.1		432939	85701477	NM_001013791.1	EG432939	NP_001013813.1	ILMN_2821833	006380301	S	537	GACGAGCACTTTGGGTAGCACCGCGACACACAATAGCCACCACGGTTAGG	15	+	25359453-25359502	15qB1	Mus musculus predicted gene, EG432939 (EG432939), mRNA.					
Mus musculus	RefSeq	ILMN_199194	ILMN_199194	LOC327995	XM_283029.2	XM_283029.2			38091759	XM_283029.2	LOC327995		ILMN_1221218	007150136	S	503	AACTGTTGGAGGCTGGTGGTTCTGTCTCCAGGGTCTCAGCAGAGGGAGGT										
Mus musculus	RefSeq	ILMN_219971	ILMN_219971	POLS	NM_198600.1	NM_198600.1		210106	38348447	NM_198600.1	Pols	NP_941002.1	ILMN_2715876	007510743	S	3701	TATCTGCATTAAGGAGCCACCGTGGGGCCGTTCGAGTGACCCGCAGATGT	13	-	69637058-69637107	13qC1	Mus musculus polymerase (DNA directed) sigma (Pols), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	POLK; MGC69673; LAK-1; TRF4; TRF4-1	POLK; MGC69673; LAK-1; TRF4; TRF4-1
Mus musculus	RefSeq	ILMN_216270	ILMN_216270	DCLK2	NM_027539.3	NM_027539.3		70762	40254280	NM_027539.3	Dclk2	NP_081815.3	ILMN_2990152	002650136	S	3924	ACAGGGGCCCCCACAGTTCACTCTCACTGTTAGATTTTGCCTTTTCCAGG	3	-	86590113-86590162	3qF1	Mus musculus doublecortin-like kinase 2 (Dclk2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Click-II; AU044875; Dcamkl2; 6330415M09Rik	Click-II; AU044875; Dcamkl2; 6330415M09Rik
Mus musculus	RefSeq	ILMN_195505	ILMN_261612	ZMYM6	NM_177462.4	NM_177462.4		100177	146198738	NM_177462.4	Zmym6	NP_803413.1	ILMN_1213680	006290110	S	3809	GGGTCAATGCAAAGACAAGTTATCCCAAGCTCCATGAAAAGGCATTGAAG				4qD2.2	Mus musculus zinc finger, MYM-type 6 (Zmym6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI593204; AI661340; 9330177P20Rik; D4Wsu24e; Zfp258	AI593204; AI661340; 9330177P20Rik; D4Wsu24e; Zfp258
Mus musculus	RefSeq	ILMN_216426	ILMN_216426	IFI44	NM_133871.1	NM_133871.1		99899	19527085	NM_133871.1	Ifi44	NP_598632.1	ILMN_2670987	002650524	S	1091	CACACGTGGATAGCCTGGATCTGATTACAAAAGAAGACATGACAGACATA	3	-	151401213-151401262	3qH3	Mus musculus interferon-induced protein 44 (Ifi44), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			p44; MTAP44; A430056A10Rik; AW261460	p44; MTAP44; A430056A10Rik; AW261460
Mus musculus	RefSeq	ILMN_216426	ILMN_216426	IFI44	NM_133871.1	NM_133871.1		99899	19527085	NM_133871.1	Ifi44	NP_598632.1	ILMN_2680136	003940482	S	2718	GCTACAAGGACCAATCGCAATTCTGTTGGATTTATATTCTGTATCTATGA	3	-	151393917-151393966	3qH3	Mus musculus interferon-induced protein 44 (Ifi44), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			p44; MTAP44; A430056A10Rik; AW261460	p44; MTAP44; A430056A10Rik; AW261460
Mus musculus	RefSeq	ILMN_186634	ILMN_250243	RNF216	NM_080561.3	NM_080561.3		108086	46391096	NM_080561.3	Rnf216	NP_542128.2	ILMN_1237483	005690544	S	2198	GCCGCTGTGGTGCCCAGATGTGCTACCTCTGTCGAGTTTCTATCAATGGC	5	-	143777386-143777435	5qG2	Mus musculus ring finger protein 216 (Rnf216), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU019462; Ubce7ip1; UIP83; AI647468; F830018F18Rik; C86502; TRIAD3	AU019462; Ubce7ip1; UIP83; AI647468; F830018F18Rik; C86502; TRIAD3
Mus musculus	RefSeq	ILMN_186634	ILMN_250243	RNF216	NM_080561.3	NM_080561.3		108086	46391096	NM_080561.3	Rnf216	NP_542128.2	ILMN_2462922	004230333	S	2053	GGCCTCACCTGTGAAGAGCTGGCAGAAAAGGATGACATCAAGTACCGGAC	5	-	143789630-143789679	5qG2	Mus musculus ring finger protein 216 (Rnf216), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU019462; Ubce7ip1; UIP83; AI647468; F830018F18Rik; C86502; TRIAD3	AU019462; Ubce7ip1; UIP83; AI647468; F830018F18Rik; C86502; TRIAD3
Mus musculus	RefSeq	ILMN_186634	ILMN_250243	RNF216	NM_080561.3	NM_080561.3		108086	46391096	NM_080561.3	Rnf216	NP_542128.2	ILMN_2442516	002260180	S	4428	ATCATATGTAACTTGACTTTTGTGTAAATAAATGTTTGTGAACGCTTAAA				5qG2	Mus musculus ring finger protein 216 (Rnf216), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU019462; Ubce7ip1; UIP83; AI647468; F830018F18Rik; C86502; TRIAD3	AU019462; Ubce7ip1; UIP83; AI647468; F830018F18Rik; C86502; TRIAD3
Mus musculus	MEEBO	ILMN_187654	ILMN_187654	4732466D17RIK	scl17493.16.2045_235				38073311	XM_129420	4732466D17Rik		ILMN_2445971	003060167	S	4	CAGGTGTTCAAACACCTTTTTGTTGACCCAAAAATGACATCACAGAACTT										
Mus musculus	RefSeq	ILMN_185961	ILMN_185961	XRCC4	NM_028012.3	NM_028012.3		108138	146141152	NM_028012.3	Xrcc4	NP_082288.1	ILMN_1240711	001090291	S	1318	ATCTTTAACACTTTTTTAGTTGCACTTTAAATTATCTTTGTTGAAGCATT				13qC3	Mus musculus X-ray repair complementing defective repair in Chinese hamster cells 4 (Xrcc4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence ISO]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IDA]	The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50769] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a pro-B cell. Pro-B cells are the earliest stage of the B cell lineage and undergo heavy chain D and J gene rearrangements, although they are not fully committed [goid 2328] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IMP]; The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase [goid 6266] [evidence IDA]; The process by which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33151] [evidence IMP]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2310057B22Rik; AW545101; AW413319	2310057B22Rik; AW545101; AW413319
Mus musculus	Riken	ILMN_205983	ILMN_205983	DPP6	ri|D130067B08|PX00185L23|AK051708|2140					AK051708	Dpp6		ILMN_2576662	000070367	S	560	GATCAAGACCGCTAAAATGCAGGGCAACGTGATGGAGCTGGTGGGGAGTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200901	ILMN_200901	LOC385461	XM_358241.1	XM_358241.1			38086921	XM_358241.1	LOC385461		ILMN_1238908	006960110	S	887	AGTATATAGGACTGGACGGGAACATCACCTGCTTCGTGAATGGTGCTGGG										
Mus musculus	RefSeq	ILMN_187362	ILMN_187362	TNRC18	NM_178242.2	NM_178242.2		231861	31342462	NM_178242.2	Tnrc18	NP_839973.1	ILMN_3003152	000150592	S	5738	GGCTGTAGCCGTCTAGGTTTTTGGCAGCGTAGCCTGCCCTATCCGCCTAT	5	-	143516953-143517002	5qG2	Mus musculus trinucleotide repeat containing 18 (Tnrc18), transcript variant B, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC59613; BC025631	MGC59613; BC025631
Mus musculus	RefSeq	ILMN_187362	ILMN_187362	TNRC18	NM_178242.2	NM_178242.2		231861	31342462	NM_178242.2	Tnrc18	NP_839973.1	ILMN_2495393	001030639	S	5348	ACTCTGACGAAGACGAAGACTTCCTGAAGAATGAGTGGTCTGCCCAGGGC	5	-	143517343-143517392	5qG2	Mus musculus trinucleotide repeat containing 18 (Tnrc18), transcript variant B, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC59613; BC025631	MGC59613; BC025631
Mus musculus	RefSeq	ILMN_187362	ILMN_187362	TNRC18	NM_178242.2	NM_178242.2		231861	31342462	NM_178242.2	Tnrc18	NP_839973.1	ILMN_2443470	003890112	S	4682	ACAGGCACGAGGATGCCCATAGAAGCCTGGCACGCAGAGGCCCTGGCAGG	5	-	143526587-143526636	5qG2	Mus musculus trinucleotide repeat containing 18 (Tnrc18), transcript variant B, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC59613; BC025631	MGC59613; BC025631
Mus musculus	RefSeq	ILMN_208669	ILMN_208669	GRINA	NM_023168.3	NM_023168.3		66168	118130342	NM_023168.3	Grina	NP_075657.1	ILMN_2588411	002140753	S	1612	GAGCAGAGAGGATGTCATGTTTCAAGGGAGGAGGCTCTCTCGTGCTGCCA	15	+	76080253-76080302	15qD3	Mus musculus glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) (Grina), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1110025J15Rik; Lag	1110025J15Rik; Lag
Mus musculus	Riken	ILMN_203531	ILMN_203531	5330435L01RIK	ri|5330435L01|PX00054P14|AK030591|4199					AK030591	5330435L01Rik		ILMN_1221064	004920711	S	4081	TGACCTTTGGGGCGTTGTAACATGCCAGCAGGGACAAACATGAGCCCTGA										
Mus musculus	RefSeq	ILMN_218174	ILMN_258542	BARHL2	NM_001005477.1	NM_001005477.1		104382	56699435	NM_001005477.1	Barhl2	NP_001005477.1	ILMN_1257175	001780382	S	1565	AACCAACTGGAATAGAGGCAGAGGAGTAAAAGGGGGAGCTCACCGGTGGG	5	-	106882241-106882290	5qE5	Mus musculus BarH-like 2 (Drosophila) (Barhl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 45727] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]; Any process that modulates the rate, direction or extent of axon extension [goid 30516] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MBH1; E130309B19Rik; MGC90874	MBH1; E130309B19Rik; MGC90874
Mus musculus	RefSeq	ILMN_216257	ILMN_253823	C330002I19RIK	NM_001081378.1	NM_001081378.1		77480	124487038	NM_001081378.1	C330002I19Rik	NP_001074847.1	ILMN_1213331	001340255	S	7106	CACTGTCTGTGAAGTTAATGCTGGAGTGCCAAGTGCACACGGGGACTAGG	12	+	25744266-25744315	12qA1.3	Mus musculus RIKEN cDNA C330002I19 gene (C330002I19Rik), mRNA.				Kidins220; mKIAA1250; 3110039L19Rik; AI316525; AI194387	Kidins220; mKIAA1250; 3110039L19Rik; AI316525; AI194387
Mus musculus	RefSeq	ILMN_216257	ILMN_253823	C330002I19RIK	NM_001081378.1	NM_001081378.1		77480	124487038	NM_001081378.1	C330002I19Rik	NP_001074847.1	ILMN_1233456	001260202	S	3644	CTCACGTTCATCAGTAAAAACGAGTTTGCCCAGAGATCAGAACAATGGCC	12	+	25725383-25725432	12qA1.3	Mus musculus RIKEN cDNA C330002I19 gene (C330002I19Rik), mRNA.				Kidins220; mKIAA1250; 3110039L19Rik; AI316525; AI194387	Kidins220; mKIAA1250; 3110039L19Rik; AI316525; AI194387
Mus musculus	RefSeq	ILMN_199932	ILMN_199932	LOC381578	XM_355538.1	XM_355538.1			38079047	XM_355538.1	LOC381578		ILMN_1214825	000160497	S	82	ACCAACCTTGACTTTCAGATGGAGCAGAACACAGGCCAGCGAGCTGTGCT										
Mus musculus	RefSeq	ILMN_196344	ILMN_196344	GPD1L	NM_175380.3	NM_175380.3		333433	34594656	NM_175380.3	Gpd1l	NP_780589.2	ILMN_2991214	005690762	S	1189	GAACAGCTCTGCTGTGCCCACTGGAGGAATCCGGGGCTTGGCAGTGGGAT	9	-	114751031-114751080	9qF3	Mus musculus glycerol-3-phosphate dehydrogenase 1-like (Gpd1l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate [goid 9331] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 46168] [evidence IEA]; The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 6072] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH + H+ [goid 4367] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16614] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	2210409H23Rik; D9Ertd660e	2210409H23Rik; D9Ertd660e
Mus musculus	RefSeq	ILMN_214185	ILMN_214185	NTNG1	NM_030699.1	NM_030699.1		80883	13507635	NM_030699.1	Ntng1	NP_109624.1	ILMN_2645263	001990519	S	3830	GATTTATGGTGATCATGTGACTCTAGGGATGCCGATCTATGTATCCTTCC	3	-	109584191-109584240	3qF3	Mus musculus netrin G1 (Ntng1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]		Lmnt1; AI853992; A930010C08Rik; MGC99878	Lmnt1; AI853992; A930010C08Rik; MGC99878
Mus musculus	RefSeq	ILMN_214185	ILMN_214185	NTNG1	NM_030699.1	NM_030699.1		80883	13507635	NM_030699.1	Ntng1	NP_109624.1	ILMN_2829625	002100546	S	3644	GGAAGACGGATTGATGGTCACTAGCTTGGACAACGTCTGCAAAATATGAG	3	-	109584377-109584426	3qF3	Mus musculus netrin G1 (Ntng1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]		Lmnt1; AI853992; A930010C08Rik; MGC99878	Lmnt1; AI853992; A930010C08Rik; MGC99878
Mus musculus	RefSeq	ILMN_214185	ILMN_214185	NTNG1	NM_030699.1	NM_030699.1		80883	13507635	NM_030699.1	Ntng1	NP_109624.1	ILMN_1217847	001980020	S	2372	ACGGTGCGAAGAGGCGGGCAGCTGTGGCTCCGAATCCGGCCAGGGAGCAC	3	-	109585649-109585698	3qF3	Mus musculus netrin G1 (Ntng1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]		Lmnt1; AI853992; A930010C08Rik; MGC99878	Lmnt1; AI853992; A930010C08Rik; MGC99878
Mus musculus	MEEBO	ILMN_189482	ILMN_189482	AA881470	scl27046.14_1				27370061	NM_172724	AA881470		ILMN_1253882	002750138	S	16	CATAATCTTTAAAGAATTCAGATACATTAAAAGTTCAAAGTCACAACTGT										
Mus musculus	RefSeq	ILMN_217829	ILMN_217829	HFE2	NM_027126.2	NM_027126.2		69585	31560103	NM_027126.2	Hfe2	NP_081402.2	ILMN_2688092	006660767	S	191	TTCACTAGGTAGGAGGCTCATCATCTGGGAAGAACCGGTGCCTGGGGGGA	3	+	96611876-96611925	3qF2.1	Mus musculus hemochromatosis type 2 (juvenile) (human homolog) (Hfe2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI414844; DL-M; 5230400G09Rik; hemojuvelin; 2310035L15Rik; AI789733; Rgmc; HJV	AI414844; DL-M; 5230400G09Rik; hemojuvelin; 2310035L15Rik; AI789733; Rgmc; HJV
Mus musculus	RefSeq	ILMN_217829	ILMN_217829	HFE2	NM_027126.2	NM_027126.2		69585	31560103	NM_027126.2	Hfe2	NP_081402.2	ILMN_2688089	005570021	S	193	CACTAGGTAGGAGGCTCATCATCTGGGAAGAACCGGTGCCTGGGGGGACC	3	+	96611878-96611927	3qF2.1	Mus musculus hemochromatosis type 2 (juvenile) (human homolog) (Hfe2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI414844; DL-M; 5230400G09Rik; hemojuvelin; 2310035L15Rik; AI789733; Rgmc; HJV	AI414844; DL-M; 5230400G09Rik; hemojuvelin; 2310035L15Rik; AI789733; Rgmc; HJV
Mus musculus	RefSeq	ILMN_222451	ILMN_222451	2410004L22RIK	NM_029621.2	NM_029621.2		76478	141802841	NM_029621.2	2410004L22Rik	NP_083897.1	ILMN_2749747	000870241	S	1220	CCTCAGGCAGCCTGTCCTACCTGAGTATTTCCTAGCTGGCCTTTCTGCTC	8	-	73775206-73775255	8qB3.3	Mus musculus RIKEN cDNA 2410004L22 gene (2410004L22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210933	ILMN_210933	MYL4	NM_010858.4	NM_010858.4		17896	118130182	NM_010858.4	Myl4	NP_034988.2	ILMN_2610744	002510561	S	799	TACGGAGTATTGGACTCACATGGCTTCTCTGACCCACAACCTTCCCTGGA	11	+	104448449-104448498	11qE1	Mus musculus myosin, light polypeptide 4 (Myl4), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ALC1; AMLC; MLC1a; GT1; Myla; ELC; ELC1a	ALC1; AMLC; MLC1a; GT1; Myla; ELC; ELC1a
Mus musculus	RefSeq	ILMN_222613	ILMN_245311	IFITM6	NM_001033632.1	NM_001033632.1		213002	75812951	NM_001033632.1	Ifitm6	NP_001028804.1	ILMN_1218181	005130059	S	452	GGACTCCATGCACTGTCAAAGTCAATGGACTACTAAATTCTTCCATGCAC	7	-	148201750-148201799	7qF5	Mus musculus interferon induced transmembrane protein 6 (Ifitm6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			fragilis5; MGC129399; A330075D07; MGC129398; Fgls5	fragilis5; MGC129399; A330075D07; MGC129398; Fgls5
Mus musculus	RefSeq	ILMN_245400	ILMN_245400	MARK3	NM_021516.1	NM_021516.1		17169	12313870	NM_021516.1	Mark3	NP_067491.1	ILMN_3134078	005090377	A	1699	TTGCTTCAACCCACAGTATTAGCAGTGCGACCACCCCAGATCGCATCCGC	12	+	112095309-112095358	12qF1	Mus musculus MAP/microtubule affinity-regulating kinase 3 (Mark3), transcript variant 1, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	1600015G02Rik; KIAA4230; mKIAA4230; mKIAA1860; A430080F22Rik; ETK-1; Emk2	1600015G02Rik; KIAA4230; mKIAA4230; mKIAA1860; A430080F22Rik; ETK-1; Emk2
Mus musculus	RefSeq	ILMN_217071	ILMN_239114	4930465K10RIK	XR_005150.1	XR_005150.1		67640	94405014	XR_005150.1	4930465K10Rik		ILMN_1252934	005690328	S	1563	CGCAGACCGAGAAAATGGAAGGCAAAGACGGAAAACAAATGCGCCTCTTG				18qE3	PREDICTED: Mus musculus RIKEN cDNA 4930465K10 gene (4930465K10Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_199831	ILMN_199831	LOC383067	XM_356836.1	XM_356836.1			38077731	XM_356836.1	LOC383067		ILMN_1220061	004150735	S	323	AGGAGGTACGGGAGACTGACCGCAACGGCCGGGCAATTGGGACCCCATTT										
Mus musculus	RefSeq	ILMN_240809	ILMN_240809	GM867	NM_001037714.1	NM_001037714.1		333670	83423527	NM_001037714.1	Gm867	NP_001032803.1	ILMN_2806315	005550402	S	919	TCCCAGGGGACCACTTGCAAATACCTCTCCAGTCTCCCTGCTTAGGAGTG	10	-	75381691-75381740	10qC1	Mus musculus gene model 867, (NCBI) (Gm867), mRNA.				Gm736	Gm736
Mus musculus	RefSeq	ILMN_213453	ILMN_213453	OLFR157	NM_019475.3	NM_019475.3		100040268	148596975	NM_019475.3	Olfr157	NP_062348.1	ILMN_1229628	007330678	S	1390	ACCCAGTGCCACACTCTCTTCTTACATCAGCCCTCATCCTGTCACCATCA				4qB1	Mus musculus olfactory receptor 157 (Olfr157), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence TAS]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR262-12; OR37C; Olfr37c; mOR37c	MOR262-12; OR37C; Olfr37c; mOR37c
Mus musculus	RefSeq	ILMN_197552	ILMN_258166	B020017C02RIK	XM_915637.2	XM_915637.2		212507	94369389	XM_915637.2	B020017C02Rik	XP_920730.1	ILMN_1239145	000360286	S	1793	AAGCTGCCGGTTTGCCCTAGCCGATACACCCAGACGCCCAAAATGCTGGA				3qC	PREDICTED: Mus musculus RIKEN cDNA B020017C02 gene (B020017C02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209118	ILMN_209118	CUZD1	NM_008411.3	NM_008411.3		16433	133778950	NM_008411.3	Cuzd1	NP_032437.3	ILMN_2592718	005090746	S	2114	ATGAAGCAGCTCCCTGTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCC	7	-	138452160-138452209	7qF3	Mus musculus CUB and zona pellucida-like domains 1 (Cuzd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded, cytoplasmic secretory granule found in enzyme-secreting cells and visible by light microscopy. Contain zymogen, an inactive enzyme precursor, often of a digestive enzyme [goid 42588] [evidence IDA]; The lipid bilayer surrounding a zymogen granule [goid 42589] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Itmap1; UTCZP; UO-44; ERG-1; USG	Itmap1; UTCZP; UO-44; ERG-1; USG
Mus musculus	RefSeq	ILMN_220902	ILMN_220902	SMC6	NM_025695.4	NM_025695.4		67241	118130281	NM_025695.4	Smc6	NP_079971.2	ILMN_2728385	001820296	S	3532	ATGGCAGATTCCCAACGTTTTAGACAATTTATCTTGCTTACCCCTCAAAG	12	+	11323467-11323516	12qA1.1	Mus musculus structural maintenance of chromosomes 6 (Smc6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Smc6l1; KIAA4103; MGC96146; AA990493; AW742439; AU018782; 3830418C19Rik; mKIAA4103; 2810489L22Rik	Smc6l1; KIAA4103; MGC96146; AA990493; AW742439; AU018782; 3830418C19Rik; mKIAA4103; 2810489L22Rik
Mus musculus	MEEBO	ILMN_196242	ILMN_196242	ARSA	scl47615.4.1_0				33468880	NM_009713	Arsa		ILMN_1247106	005810286	S	19	CTCGTATGAAATCTGGAACATTCACCACACCAGGATCTTAAAATCTGGGG						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a cerebroside 3-sulfate + H2O = a cerebroside + SO4(2-) (sulfate) [goid 4098] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISO]		
Mus musculus	Riken	ILMN_204520	ILMN_204520	EDN3	ri|B230345P12|PX00160N11|AK046164|1438					AK046164	Edn3		ILMN_1258861	000540332	S	469	ACCTTTTCTGTCCTGAACCTGGACTCCCCTGAAAAAGCAGCCAGGCGGGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A decrease in the diameter of blood vessels, especially arteries, usually causing an increase in blood pressure [goid 42310] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IMP]			
Mus musculus	RefSeq	ILMN_195523	ILMN_315444	D430019H16RIK	XM_001476158.1	XM_001476158.1		268595	149263533	XM_001476158.1	D430019H16Rik	XP_001476208.1	ILMN_2516338	003360278	S	5511	GAGAGCATCAGCCAAGCTTCTGTGTTTGTGACGATTGCTTAGCCAGCTTG	12	+	106731030-106731079	12qE	PREDICTED: Mus musculus RIKEN cDNA D430019H16 gene (D430019H16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199492	ILMN_199492	LOC383563	XM_357126.1	XM_357126.1			38073370	XM_357126.1	LOC383563		ILMN_2535414	002000209	S	647	TGCTACTGACCTTCGCGCTGCCGCTGGCTGTCACCCTGATCTGCTACTGG										
Mus musculus	RefSeq	ILMN_219509	ILMN_229531	LOC672329	XM_992692.1	XM_992692.1		672329	94378735	XM_992692.1	LOC672329	XP_997786.1	ILMN_2709834	006520437	S	25	CTCTTCCTGCTGTTCAGAATCACAGGCATAATATGTGACATCCAGATGAC					PREDICTED: Mus musculus similar to Ig kappa chain V-I region HK102 precursor (LOC672329), mRNA.					
Mus musculus	RefSeq	ILMN_229041	ILMN_229041	POGZ	NM_172683.1	NM_172683.1		229584	27369993	NM_172683.1	Pogz	NP_766271.1	ILMN_2857204	007330315	S	4108	TCTGAGGAGCACTCAGCTTCTGCCCCCCGACCCAGGTCATCTCCTGAAGA	3	+	94965585-94965634	3qF2.1	Mus musculus pogo transposable element with ZNF domain (Pogz), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	9530006B08Rik; AU044539; AU015913	9530006B08Rik; AU044539; AU015913
Mus musculus	MEEBO	ILMN_190837	ILMN_190837	1110059G02RIK	scl9945.1.1_54						1110059G02Rik		ILMN_2473692	006520240	S	15	CTTGGTAGATTCTTCCTCAGTTGCCCGAGCCTGGATTCATTAGTCTGGTA										
Mus musculus	RefSeq	ILMN_218243	ILMN_218243	CSTF2T	NM_031249.2	NM_031249.2		83410	148277060	NM_031249.2	Cstf2t	NP_112539.2	ILMN_2693476	002630176	S	3680	TTCTTATAGTCTTTGTTATAAGAAAATCTCTGCATTGTTTAATGAAAATT				19qC1	Mus musculus cleavage stimulation factor, 3' pre-RNA subunit 2, tau (Cstf2t), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	tauCstF-64; 64kDa; C77975; tCstF-64	tauCstF-64; 64kDa; C77975; tCstF-64
Mus musculus	RefSeq	ILMN_199023	ILMN_199023	LOC380636	XM_358390.1	XM_358390.1			38090499	XM_358390.1	LOC380636		ILMN_2533773	006110528	S	502	GCTGCCCTTCTCACACACGCAGTTGTTTTTCACAGACTGAGGCTCCTGCG										
Mus musculus	RefSeq	ILMN_220588	ILMN_220588	PDK4	NM_013743.2	NM_013743.2		27273	118130875	NM_013743.2	Pdk4	NP_038771.1	ILMN_1259322	004120131	S	3020	GCAGTGACTTTCACAGCAGGACTTTGACTCCCACATTGGTTGATCACACA	6	-	5433734-5433783	6qA1	Mus musculus pyruvate dehydrogenase kinase, isoenzyme 4 (Pdk4), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The posttranslational phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine) [goid 18106] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate [goid 6086] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine [goid 4673] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate dehydrogenase (acetyl-transferring) = ADP + pyruvate dehydrogenase (acetyl-transferring) phosphate [goid 4740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine/tyrosine = ADP + protein serine/threonine/tyrosine phosphate [goid 4712] [evidence TAS]	AV005916	AV005916
Mus musculus	RefSeq	ILMN_200264	ILMN_200264	LOC386097	XM_359068.1	XM_359068.1			38081145	XM_359068.1	LOC386097		ILMN_1242681	005490494	S	260	GGGGTCTTGCAGAGTACATGCTGGTTGGAAGGACTGAGTGTGAGCTTCTC										
Mus musculus	RefSeq	ILMN_204001	ILMN_249619	2310051N18RIK	XM_977376.1	XM_977376.1		71941	94384567	XM_977376.1	2310051N18Rik	XP_982470.1	ILMN_1218543	006250088	S	1241	GGTAGAGAGCACAGCTTGCAGGTTACTCCAGGTCTGAAAAGAAGACGGCG				8qA1.1	PREDICTED: Mus musculus RIKEN cDNA 2310051N18 gene, transcript variant 1 (2310051N18Rik), mRNA.					
Mus musculus	MEEBO	ILMN_222288	ILMN_222288	5730410E15RIK	scl0319613.1_56	NM_178765.2			31343447	NM_178765.2	5730410E15Rik		ILMN_2747501	004480221	S	2530	TAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222962	ILMN_222962	LY9	NM_008534.2	NM_008534.2		17085	111955337	NM_008534.2	Ly9	NP_032560.2	ILMN_1231309	001660025	S	2097	CCTGCCATGGCTTAGACTAGCCTGAATTTGATGCCTTCCTCTTCTTGTCA	1	-	173519046-173519095	1qH3	Mus musculus lymphocyte antigen 9 (Ly9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	T100; AI893573; Lgp100; CD229; SLAMF3; Ly-9	T100; AI893573; Lgp100; CD229; SLAMF3; Ly-9
Mus musculus	MEEBO	ILMN_210086	ILMN_210086	C030034I22RIK	scl49657.3_384				51770374	XM_488832	C030034I22Rik		ILMN_1238113	001660338	S	2094	CCACCCTCTTGGACTGAATATCTCAGGTCATCTTAGGGTTTCCTCCCGGA										
Mus musculus	RefSeq	ILMN_211481	ILMN_211481	PTTG1IP	NM_145925.2	NM_145925.2		108705	141803230	NM_145925.2	Pttg1ip	NP_666037.1	ILMN_2616309	006330309	S	2108	AGCCTAAGGAGTGCAGCAGGTGCTCGTGGGAGTGGTCTGTGCCTACCTTT	10	+	77061338-77061387	10qC1	Mus musculus pituitary tumor-transforming 1 interacting protein (Pttg1ip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AI314311; AU018448; C79540; 1810010L20Rik; MGC36923	AI314311; AU018448; C79540; 1810010L20Rik; MGC36923
Mus musculus	MEEBO	ILMN_188760	ILMN_188760	FLG	scl22917.1.4_251						Flg		ILMN_2455468	004010743	S	6	CCTGCAATAGGACTGACTTCTCCATGTGTTCCCCTTGGACTTTCTAGGAT						An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence TAS]			
Mus musculus	RefSeq	ILMN_254160	ILMN_254160	CAMK2N1	NM_025451.1	NM_025451.1		66259	113930674	NM_025451.1	Camk2n1	NP_079727.1	ILMN_2810963	006330195	S	1343	ATAGGGGTTCTCTTAAGGCTCGCCAGCTGCCTGTTTTGCATGGTATTTGC	4	+	138013809-138013858	4qD3	Mus musculus calcium/calmodulin-dependent protein kinase II inhibitor 1 (Camk2n1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]		Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IDA]	1810006K23Rik	1810006K23Rik
Mus musculus	RefSeq	ILMN_192324	ILMN_254160	CAMK2N1	NM_025451.1	NM_025451.1		66259	113930674	NM_025451.1	Camk2n1	NP_079727.1	ILMN_2487046	001580349	S	1325	GAGTCTTTTCTGTTATTTATAGGGGTTCTCTTAAGGCTCGCCAGCTGCCT	4	+	138013791-138013840	4qD3	Mus musculus calcium/calmodulin-dependent protein kinase II inhibitor 1 (Camk2n1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]		Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IDA]	1810006K23Rik	1810006K23Rik
Mus musculus	RefSeq	ILMN_215430	ILMN_215430	2810048G17RIK	NM_133746.2	NM_133746.2		72691	31981571	NM_133746.2	2810048G17Rik	NP_598507.2	ILMN_2887198	002760500	S	1678	AGGTTCACAGAAATTGAGGTGGGGTGAGGGTAGGGAGGGGGTAGGGACTG	19	-	47185864-47185913	19qC3	Mus musculus RIKEN cDNA 2810048G17 gene (2810048G17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196602	ILMN_196605	EAR3	NM_017388.1	NM_017388.1		53876	8393282	NM_017388.1	Ear3	NP_059084.1	ILMN_2524986	006860674	S	223	GCTGTTGGTGTGTGTGGAAATCCAAGTGGCTTGTGCAGTGACAATATAAG					Mus musculus eosinophil-associated, ribonuclease A family, member 3 (Ear3), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	Rnase3; mR3	Rnase3; mR3
Mus musculus	RefSeq	ILMN_196605	ILMN_196605	EAR3	NM_017388.1	NM_017388.1		53876	8393282	NM_017388.1	Ear3	NP_059084.1	ILMN_1256943	002140035	S	295	TCTCGGGTACATATAACTGTCTGTAACATCACCAGTCGGAGGAGAATACC					Mus musculus eosinophil-associated, ribonuclease A family, member 3 (Ear3), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	Rnase3; mR3	Rnase3; mR3
Mus musculus	RefSeq	ILMN_196605	ILMN_196605	EAR3	NM_017388.1	NM_017388.1		53876	8393282	NM_017388.1	Ear3	NP_059084.1	ILMN_1219174	004180435	S	379	GTGGAGTACTACACAGTTGCCTGTAATCCCAGAACTTCACTGGACAGTCC					Mus musculus eosinophil-associated, ribonuclease A family, member 3 (Ear3), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	Rnase3; mR3	Rnase3; mR3
Mus musculus	RefSeq	ILMN_216821	ILMN_216821	TBC1D10C	NM_178650.3	NM_178650.3		108995	126517464	NM_178650.3	Tbc1d10c	NP_848765.2	ILMN_2842338	000380672	S	1561	GAAGGATGCTGAGTGGAGCTTGTGGGGAGCTGTTTGGTGCTTGCCATTGC	19	-	4184505-4184554	19qA	Mus musculus TBC1 domain family, member 10c (Tbc1d10c), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	1810062O14Rik; AI428527	1810062O14Rik; AI428527
Mus musculus	RefSeq	ILMN_203175	ILMN_216821	TBC1D10C	NM_178650.3	NM_178650.3		108995	126517464	NM_178650.3	Tbc1d10c	NP_848765.2	ILMN_1246704	007150228	S	647	TTGGTGCAGATCTGCGAGGTCTACCTCCCTGGCTACTATGGGCCCCACAT	19	-	4188246-4188295	19qA	Mus musculus TBC1 domain family, member 10c (Tbc1d10c), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	1810062O14Rik; AI428527	1810062O14Rik; AI428527
Mus musculus	Riken	ILMN_206095	ILMN_206095	E530017G24RIK	ri|E530017G24|PX00319E14|AK054557|4064					AK054557	E530017G24Rik		ILMN_1228450	000940671	S	3823	CTGTAATTCCCAACACCCCAGCAGTGGGAAACTGTTAGTCAGGGTCCTGC										
Mus musculus	RefSeq	ILMN_253324	ILMN_253324	ANAPC11	NM_001038230.1	NM_001038230.1		66156	84039695	NM_001038230.1	Anapc11	NP_001033319.1	ILMN_3099265	003420546	A	3201	TCCACCTCGGTCCCATTGGAGTTCCTGCCTTGGCTTTCTACAGCGGACTG	11	+	120469423-120469472	11qE2	Mus musculus anaphase promoting complex subunit 11 (Anapc11), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	R75218; 1110011I19Rik	R75218; 1110011I19Rik
Mus musculus	RefSeq	ILMN_223042	ILMN_223042	CLDN23	NM_027998.3	NM_027998.3		71908	148287019	NM_027998.3	Cldn23	NP_082274.1	ILMN_2758545	002350398	S	1681	GTCTTCCAAAAGCCAAGGCGATGCTACACTGTCCTGTTCCCGAGATACCT				8qA4	Mus musculus claudin 23 (Cldn23), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	2310014B08Rik	2310014B08Rik
Mus musculus	Riken	ILMN_204913	ILMN_204913	TBXAS1	ri|C130072B09|PX00171H18|AK048544|2483					AK048544	Tbxas1		ILMN_2568578	001170392	S	1699	AATCACACGCACAAGATGGTAGAATGAATGGGCCAGGGAGCCCCAAGCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-9-alpha,11-alpha-epoxy-15-hydroxythromba-5,13-dienoate [goid 4796] [evidence IMP]		
Mus musculus	RefSeq	ILMN_200659	ILMN_200659	LOC381792	XM_358653.1	XM_358653.1			38084941	XM_358653.1	LOC381792		ILMN_1216861	004260168	S	161	AGAGGAGGCGTTCAGGGCCCAAGCAGAACCAACACTGGTTTGGAGGATGA										
Mus musculus	RefSeq	ILMN_221994	ILMN_221994	AA409316	NM_134087.1	NM_134087.1		105732	29789362	NM_134087.1	AA409316	NP_598848.1	ILMN_2743155	000730121	S	4289	GAGTTGGCCTCGGGCAGTTTAAGGGAAGAGAGGGATGCTGGCTAGGACAG	15	-	75831686-75831735	15qD3	Mus musculus expressed sequence AA409316 (AA409316), mRNA.		The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]			
Mus musculus	RefSeq	ILMN_238151	ILMN_238151	DCPP3	NM_001077633.1	NM_001077633.1		620253	117647231	NM_001077633.1	Dcpp3	NP_001071101.1	ILMN_2846792	000630767	S	288	CTGTCTAAGGAAGAGCACATCACTGGGGTCGAAGGCTCATACTCTCCTTC	17	+	24056086-24056135	17qA3.3	Mus musculus demilune cell and parotid protein 3 (Dcpp3), mRNA.				Dcpp-3; SPT-3; EG620253	Dcpp-3; SPT-3; EG620253
Mus musculus	RefSeq	ILMN_194164	ILMN_194164	ZBTB43	NM_027947.2	NM_027947.2		71834	71037382	NM_027947.2	Zbtb43	NP_082223.2	ILMN_2514599	006520612	S	190	CAGATAGGGCACCAAGGACAGAGCAAAGTACGATTCCATCATCAAAGTCC	2	-	33317799-33317848	2qB	Mus musculus zinc finger and BTB domain containing 43 (Zbtb43), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Zfp297b; mKIAA0414; 1700010E06Rik	Zfp297b; mKIAA0414; 1700010E06Rik
Mus musculus	RefSeq	ILMN_215170	ILMN_215170	SAMD10	NM_172676.2	NM_172676.2		229011	34328388	NM_172676.2	Samd10	NP_766264.2	ILMN_2656359	002450528	S	1804	CCCCTCTGTGTGCCAAGAGCTGGCCTCGATTCAAGGTTGCTCATTACAGT	2	-	181330168-181330217	2qH4	Mus musculus sterile alpha motif domain containing 10 (Samd10), mRNA.				D930033N23Rik; E130318E08	D930033N23Rik; E130318E08
Mus musculus	RefSeq	ILMN_214374	ILMN_257962	GGA2	NM_028758.2	NM_028758.2		74105	131890064	NM_028758.2	Gga2	NP_083034.1	ILMN_1227459	005570373	S	2703	TTGTGACCCTGTGTTCGTTGTTGTGAATCATAGTTAAGGGGGGCCAGCCC	7	-	129132374-129132423	7qF2-qF3	Mus musculus golgi associated, gamma adaptin ear containing, ARF binding protein 2 (Gga2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISO]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ARF, ADP-ribosylation factor, a small monomeric cytosolic GTPase that, when bound to GTP, binds to the membranes of cells [goid 30306] [evidence ISO]	1200007E24Rik; mKIAA1080	1200007E24Rik; mKIAA1080
Mus musculus	RefSeq	ILMN_214374	ILMN_257962	GGA2	NM_028758.2	NM_028758.2		74105	131890064	NM_028758.2	Gga2	NP_083034.1	ILMN_2647346	005670437	S	1551	GTGTATGACCGGAATGGCTTCCGAATTCTGCTGCACTTCTCCCAGACTGG	7	-	129135107-129135156	7qF2-qF3	Mus musculus golgi associated, gamma adaptin ear containing, ARF binding protein 2 (Gga2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISO]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ARF, ADP-ribosylation factor, a small monomeric cytosolic GTPase that, when bound to GTP, binds to the membranes of cells [goid 30306] [evidence ISO]	1200007E24Rik; mKIAA1080	1200007E24Rik; mKIAA1080
Mus musculus	RefSeq	ILMN_214374	ILMN_257962	GGA2	NM_028758.2	NM_028758.2		74105	131890064	NM_028758.2	Gga2	NP_083034.1	ILMN_2705689	007380564	S	2547	TCACTACAGTGCCTTAGATACTCCCTTAGACGGACCCTCTTGAGGCCTTG	7	-	129132530-129132579	7qF2-qF3	Mus musculus golgi associated, gamma adaptin ear containing, ARF binding protein 2 (Gga2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISO]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ARF, ADP-ribosylation factor, a small monomeric cytosolic GTPase that, when bound to GTP, binds to the membranes of cells [goid 30306] [evidence ISO]	1200007E24Rik; mKIAA1080	1200007E24Rik; mKIAA1080
Mus musculus	RefSeq	ILMN_200182	ILMN_200182	LOC385653	XM_358848.1	XM_358848.1			38080828	XM_358848.1	LOC385653		ILMN_1234076	002370113	S	707	GGAGGGAGATACTTGAAAGAAGGCACACTGTGGAAGAAGCATGGAAAACG										
Mus musculus	RefSeq	ILMN_216737	ILMN_216737	TDO2	NM_019911.2	NM_019911.2		56720	31982696	NM_019911.2	Tdo2	NP_064295.2	ILMN_2674643	004180187	S	1373	GTCCAATCCTGGAAAAAAGTTTATGATCTTGCATATCATGATGGTGAGCG	3	-	81762546-81762595	3qE3	Mus musculus tryptophan 2,3-dioxygenase (Tdo2), mRNA.		The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-tryptophan + O2 = N-formyl-L-kynurenine [goid 4833] [evidence IEA]	TDO; TO; AA407491	TDO; TO; AA407491
Mus musculus	RefSeq	ILMN_214028	ILMN_214028	OLFR569	NM_147088.1	NM_147088.1		259092	22128792	NM_147088.1	Olfr569	NP_667299.1	ILMN_1231609	002190167	S	804	CCACGTGCCACGAGTTGTCCATATCATGTTTGCTAATTTCTATCTGCTTG	7	-	110035812-110035861	7qE3	Mus musculus olfactory receptor 569 (Olfr569), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR30-1	MOR30-1
Mus musculus	RefSeq	ILMN_218679	ILMN_218679	AI837181	NM_134149.1	NM_134149.1		107242	19527385	NM_134149.1	AI837181	NP_598910.1	ILMN_2847950	004010722	S	1361	GTACATGTTCTGGCCAAGAGGAGACGCAGGGTCATGGACATGGGGTCTGC	19	+	5427145-5427194	19qA	Mus musculus expressed sequence AI837181 (AI837181), mRNA.				N28173; Bles03	N28173; Bles03
Mus musculus	RefSeq	ILMN_217834	ILMN_217834	OLFR883	NM_146419.2	NM_146419.2		258414	112982849	NM_146419.2	Olfr883	NP_666531.1	ILMN_2688153	004050753	S	626	CCACCCTGACAATCTTTATTTCTTACACCTTGATCCTTTCCAACATCCTC	9	+	37834018-37834067	9qA4	Mus musculus olfactory receptor 883 (Olfr883), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR162-6	MOR162-6
Mus musculus	RefSeq	ILMN_213745	ILMN_213745	P2RY13	NM_028808.2	NM_028808.2		74191	141803469	NM_028808.2	P2ry13	NP_083084.1	ILMN_2640346	000270136	S	2343	AGTGACACCCAAAGTTGCTGTCCCTTACTCCAGGTAACCTTACCTGCCCA	3	-	59011949-59011998	3qD	Mus musculus purinergic receptor P2Y, G-protein coupled 13 (P2ry13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	2010001L06Rik; P2Y13; SP174; Gpr86; GPR94; GPCR1	2010001L06Rik; P2Y13; SP174; Gpr86; GPR94; GPCR1
Mus musculus	RefSeq	ILMN_185355	ILMN_248421	ZIC4	NM_009576.2	NM_009576.2		22774	70780385	NM_009576.2	Zic4	NP_033602.2	ILMN_1246394	000060482	S	3399	GGTTTACATGATAGTGGGGAAAAAATGCATGCACGTGCCTCCTCCCTCCC	9	+	91283497-91283546	9qE3.3	Mus musculus zinc finger protein of the cerebellum 4 (Zic4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_248421	ILMN_248421	ZIC4	NM_009576.2	NM_009576.2		22774	70780385	NM_009576.2	Zic4	NP_033602.2	ILMN_2810424	005890528	S	3598	TGAAGAACTGTCCCCAAGTTGTAACCCATGTACTCCCTTAGAGTTGCTGC	9	+	91283696-91283745	9qE3.3	Mus musculus zinc finger protein of the cerebellum 4 (Zic4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215155	ILMN_215155	DUS1L	NM_026824.4	NM_026824.4		68730	146141189	NM_026824.4	Dus1l	NP_081100.2	ILMN_1246694	001430647	S	1774	CCTCTTTGACACAGAAGAACCTGTTGATGTCTGCAGGTGGGGTCTGGCAA				11qE2	Mus musculus dihydrouridine synthase 1-like (S. cerevisiae) (Dus1l), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor [goid 17150] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	1110032N12Rik	1110032N12Rik
Mus musculus	RefSeq	ILMN_215155	ILMN_215155	DUS1L	NM_026824.4	NM_026824.4		68730	146141189	NM_026824.4	Dus1l	NP_081100.2	ILMN_1235751	002370138	S	1755	GCCTTTACTCAGGGAATCTCCTCTTTGACACAGAAGAACCTGTTGATGTC				11qE2	Mus musculus dihydrouridine synthase 1-like (S. cerevisiae) (Dus1l), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor [goid 17150] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	1110032N12Rik	1110032N12Rik
Mus musculus	MEEBO	ILMN_186940	ILMN_186940	6230400D17RIK	scl45841.4_210						6230400D17Rik		ILMN_2439799	003710452	S	19	TGGATTGACAGATGGGGGCCCAAGCCAGGTTAGGGATGGAGTACTGGATA										
Mus musculus	RefSeq	ILMN_184190	ILMN_239930	IFI27	NM_029803.1	NM_029803.1		76933	44771123	NM_029803.1	Ifi27	NP_084079.1	ILMN_2762944	004830543	S	308	GATGACACTTCTATCAGCTCAACTCAAAGCCTGTACAGACTACGCAGGAG	12	-	104680461-104680510	12qE	Mus musculus interferon, alpha-inducible protein 27 (Ifi27), mRNA.		The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]		Isg12(b1); 2310061N23Rik; Isg12	Isg12(b1); 2310061N23Rik; Isg12
Mus musculus	MEEBO	ILMN_224266	ILMN_224266	MUTED	scl0003718.1_141				31341803	NM_178054	Muted		ILMN_2777567	001710291	S	543	CACCAACGGAGCCATTTCCCAGCCCCCAGTCATGTTTAATAATTCAAATA							The process by which the anatomical structures of an otolith are generated and organized. Morphogenesis pertains to the creation of form [goid 32474] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204691	ILMN_204691	A330055I17RIK	ri|A330055I17|PX00131B08|AK039530|3472					AK039530	A330055I17Rik		ILMN_1242386	002000544	S	3201	GGTGACCACAGCCTGGTGCCATGGAGATGTAGGTTGTGAAGAGTCTGTCT										
Mus musculus	RefSeq	ILMN_213481	ILMN_260191	SAPS2	NM_026813.1	NM_026813.1		71474	54145495	NM_026813.1	Saps2	NP_081089.1	ILMN_2718952	003840603	S	1890	AGCTGGAGACCACCCCATCCATCACCAGCCCTCCTGAGAACACAATGGTG	15	+	89104561-89104610	15qE3	Mus musculus SAPS domain family, member 2 (Saps2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with any protein phosphatase [goid 19903] [evidence ISA]	8430411H09Rik; Pp6r2; B230107H12Rik; 1110033O10Rik	8430411H09Rik; Pp6r2; B230107H12Rik; 1110033O10Rik
Mus musculus	RefSeq	ILMN_214394	ILMN_260191	SAPS2	NM_026813.1	NM_026813.1		71474	54145495	NM_026813.1	Saps2	NP_081089.1	ILMN_2647553	002070397	S	923	TATGACTTCCTGGACCAGGAGCCGCCACTCAACCCTCTGCTTGCCAGTTT	15	+	89087185-89087234	15qE3	Mus musculus SAPS domain family, member 2 (Saps2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with any protein phosphatase [goid 19903] [evidence ISA]	8430411H09Rik; Pp6r2; B230107H12Rik; 1110033O10Rik	8430411H09Rik; Pp6r2; B230107H12Rik; 1110033O10Rik
Mus musculus	RefSeq	ILMN_213481	ILMN_260191	SAPS2	NM_026813.1	NM_026813.1		71474	54145495	NM_026813.1	Saps2	NP_081089.1	ILMN_2637440	000840039	S	3388	CGGCCGTGGCCCGCCCTGGTCAGGCTGCTTCCTTAATCAAGAAAACTACC	15	+	89116589-89116638	15qE3	Mus musculus SAPS domain family, member 2 (Saps2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with any protein phosphatase [goid 19903] [evidence ISA]	8430411H09Rik; Pp6r2; B230107H12Rik; 1110033O10Rik	8430411H09Rik; Pp6r2; B230107H12Rik; 1110033O10Rik
Mus musculus	RefSeq	ILMN_210527	ILMN_210527	ATP6AP2	NM_027439.2	NM_027439.2		70495	31980649	NM_027439.2	Atp6ap2	NP_081715.1	ILMN_2939424	005810521	S	1826	CCCCTGTGAAGTTACTCTTGGTTTGTGTGTGGTATGGCTTCAATCTGTAG	X	+	11773568-11773617	XqA1.1	Mus musculus ATPase, H+ transporting, lysosomal accessory protein 2 (Atp6ap2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	M8-9; APT6M8-9; 5730403E06Rik; Atp6ip2; ATP6M8-9	M8-9; APT6M8-9; 5730403E06Rik; Atp6ip2; ATP6M8-9
Mus musculus	RefSeq	ILMN_210527	ILMN_210527	ATP6AP2	NM_027439.2	NM_027439.2		70495	31980649	NM_027439.2	Atp6ap2	NP_081715.1	ILMN_2628657	006020593	S	137	ATGGAAATTGGCCTATACCAGGAGATCGAATCCCAGACGTAGCTGCACTG	X	+	11751779-11751828	XqA1.1	Mus musculus ATPase, H+ transporting, lysosomal accessory protein 2 (Atp6ap2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	M8-9; APT6M8-9; 5730403E06Rik; Atp6ip2; ATP6M8-9	M8-9; APT6M8-9; 5730403E06Rik; Atp6ip2; ATP6M8-9
Mus musculus	RefSeq	ILMN_210308	ILMN_210308	HAVCR1	NM_134248.1	NM_134248.1		171283	19527409	NM_134248.1	Havcr1	NP_599009.1	ILMN_2604307	000150632	S	845	AAGCTTTGCAGAACGCAGCGGTTGTGCATTCCCGAGCTGAAGACAACATC	11	+	46592042-46592091	11qB1.1	Mus musculus hepatitis A virus cellular receptor 1 (Havcr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Timd1; Tim1; AI503787	Timd1; Tim1; AI503787
Mus musculus	RefSeq	ILMN_221550	ILMN_221550	DDC8	NM_021440.1	NM_021440.1		58251	10946811	NM_021440.1	Ddc8	NP_067415.1	ILMN_1248326	002810059	S	1769	GGACAAACAGAACCAGATGATTCGTGACCTCCAGCAGCAGATCTTAGAGC	11	-	118193799-118193848	11qE2	Mus musculus testis specific protein, Ddc8 (Ddc8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_242858	ILMN_242858	HDC	NM_008230.4	NM_008230.4		15186	31982163	NM_008230.4	Hdc	NP_032256.3	ILMN_2965903	002970324	S	2290	GCGCTTGTGTGATAGAAGGGGCTGAGACGGTGGCGTGCTGTTGAGCTTGT	2	-	126285147-126285196	2qF1	Mus musculus histidine decarboxylase (Hdc), mRNA.		The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 42423] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids, as carried out by individual cells [goid 6519] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence TAS]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-histidine = histamine + CO2 [goid 4398] [evidence IMP]; Catalysis of the reaction: L-histidine = histamine + CO2 [goid 4398] [evidence TAS]	Hdc-a; AW108189; 4732480P20; Hdc-e; Hdc-s; Hdc-c	Hdc-a; AW108189; 4732480P20; Hdc-e; Hdc-s; Hdc-c
Mus musculus	RefSeq	ILMN_186080	ILMN_186080	TOP3B	NM_011624.2	NM_011624.2		21976	31981463	NM_011624.2	Top3b	NP_035754.1	ILMN_2432458	007610202	S	2635	GGCCAAGTCTCCCCTTCCTGGCAATGAGACACAGCACACAGGCTGCATCT	16	+	16892755-16892804	16qA3	Mus musculus topoisomerase (DNA) III beta (Top3b), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]	The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IMP]	Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA [goid 3916] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216345	ILMN_216345	CD248	NM_054042.2	NM_054042.2		70445	31982596	NM_054042.2	Cd248	NP_473383.1	ILMN_2670001	006520523	S	2010	AAGGGAAGGAGTTCCCAGTCCCAAATCAGTGCCACAGCTGCCCTCGGTGC	19	+	5070087-5070136	19qA	Mus musculus CD248 antigen, endosialin (Cd248), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Cd164l1; 2610111G01Rik; Tem1; AI842296	Cd164l1; 2610111G01Rik; Tem1; AI842296
Mus musculus	RefSeq	ILMN_216345	ILMN_216345	CD248	NM_054042.2	NM_054042.2		70445	31982596	NM_054042.2	Cd248	NP_473383.1	ILMN_2896843	004210427	S	2388	TGCTTTGGACACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCC	19	+	5070465-5070514	19qA	Mus musculus CD248 antigen, endosialin (Cd248), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Cd164l1; 2610111G01Rik; Tem1; AI842296	Cd164l1; 2610111G01Rik; Tem1; AI842296
Mus musculus	RefSeq	ILMN_214509	ILMN_317104	LOC100048710	XM_001480970.1	XM_001480970.1		100048710	149249741	XM_001480970.1	LOC100048710	XP_001481020.1	ILMN_2648732	002340181	S	126	CTTTTAGATGACCATGAAGTATTCCACAGTACAGATGTGCTGCAAGTGAC					PREDICTED: Mus musculus hypothetical protein LOC100048710 (LOC100048710), mRNA.					
Mus musculus	RefSeq	ILMN_209582	ILMN_209582	DOCK3	NM_153413.2	NM_153413.2		208869	148277095	NM_153413.2	Dock3	NP_700462.2	ILMN_1216210	003370274	S	6358	AGCATGATGAGGGTATGCTATTGCGGGAGGAGGCTGAGAGGCCAAGGGGC				9qF1	Mus musculus dedicator of cyto-kinesis 3 (Dock3), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	mKIAA0299; PBP; MOCA	mKIAA0299; PBP; MOCA
Mus musculus	RefSeq	ILMN_209582	ILMN_209582	DOCK3	NM_153413.2	NM_153413.2		208869	148277095	NM_153413.2	Dock3	NP_700462.2	ILMN_2698381	002030612	S	6409	TGCACCGCAAGGCCTCCCTGCCTCCTGGAAGTGTCAAGGAGGAACAGGCC				9qF1	Mus musculus dedicator of cyto-kinesis 3 (Dock3), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	mKIAA0299; PBP; MOCA	mKIAA0299; PBP; MOCA
Mus musculus	RefSeq	ILMN_192779	ILMN_227563	GRIP1	NM_028736.1	NM_028736.1		74053	19263325	NM_028736.1	Grip1	NP_083012.1	ILMN_2647580	004860544	S	136	ACACTAAATCTGCCAGCCAGACAAAGCCGCCCGATGGAGCATTGGCTGTG	10	+	119334783-119334832	10qD2	Mus musculus glutamate receptor interacting protein 1 (Grip1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4931400F03Rik; eb; KIAA4223; mKIAA4223	4931400F03Rik; eb; KIAA4223; mKIAA4223
Mus musculus	RefSeq	ILMN_220905	ILMN_220905	GPR33	NM_008159.1	NM_008159.1		14762	33469078	NM_008159.1	Gpr33	NP_032185.1	ILMN_2862316	005050598	S	1278	ACCCCCAGTCCCTAGGAATCCAGCATCTTCATCTGACCTCCATGGGCACC	12	-	53124049-53124098	12qC1	Mus musculus G protein-coupled receptor 33 (Gpr33), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an N-formyl peptide to initiate a change in cell activity [goid 4982] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188365	ILMN_188365	KCNF1	scl43364.1.2_72				41462414	NM_201531	Kcnf1		ILMN_2452057	001410167	S	2	GGTGACGTCTCTGATCCAAGCTTTCCCTCACTTAGGAAAGGAGGGCAAGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209160	ILMN_209160	TMCC2	NM_178874.2	NM_178874.2		68875	31341188	NM_178874.2	Tmcc2	NP_849205.1	ILMN_2593104	007650484	S	3035	CCAGGACTTATTCTTGGTTCATCATACTCCAGACCATGTATCCTCTGGTG	1	-	134253217-134253266	1qE4	Mus musculus transmembrane and coiled-coil domains 2 (Tmcc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110063G11Rik; KIAA0481	1110063G11Rik; KIAA0481
Mus musculus	RefSeq	ILMN_197517	ILMN_322463	LOC100043189	XM_001479710.1	XM_001479710.1		100043189	149265680	XM_001479710.1	LOC100043189	XP_001479760.1	ILMN_1225840	006060348	S	159	AAGCCTGCGGACTAAACAGACCCAAAATAAGGAGCTTCCCACTTGCCCGG	14	-	76244423-76244464:76244581-76244588	14qD3	PREDICTED: Mus musculus hypothetical protein LOC100043189 (LOC100043189), mRNA.					
Mus musculus	Riken	ILMN_205309	ILMN_205309	9030206N17RIK	ri|9030206N17|PX00060L14|AK033447|2394					AK033447	9030206N17Rik		ILMN_1245982	006650360	S	2147	CCAAAGTGCCGTGCGTCAACATATCAGAATCAGCGGCCACGTAGAACATC										
Mus musculus	RefSeq	ILMN_222084	ILMN_242346	OLFR1102	NM_207154.1	NM_207154.1		228228	47131204	NM_207154.1	Olfr1102	NP_997037.1	ILMN_1239130	005270349	S	658	CTAATCACCATCCTCATTGTCCTGGTCTCTTATGGATTTGTCCTGTTGGC	2	+	86842785-86842834	2qD	Mus musculus olfactory receptor 1102 (Olfr1102), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR179-4	MOR179-4
Mus musculus	RefSeq	ILMN_209164	ILMN_257293	DOCK10	XM_976471.1	XM_976471.1		210293	94365295	XM_976471.1	Dock10	XP_981565.1	ILMN_2749063	000290670	S	1295	GGTCCATGTCTATACAGCTTCTGCGCCTCTGTGTCTAGCATTTCCCTCAG				1qC4	PREDICTED: Mus musculus dedicator of cytokinesis 10, transcript variant 3 (Dock10), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	Riken	ILMN_202783	ILMN_202783	USP9X	ri|4631404M21|PX00011O24|AK028443|3020					AK028443	Usp9x		ILMN_1225278	007320725	S	2776	TGGACCAAAGTGGTCTGAGTCCTTTAGTACCTTGTTTTACAGTGTCTGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197351	ILMN_317720	LOC269365	XM_001481027.1	XM_001481027.1		269365	149249752	XM_001481027.1	LOC269365	XP_001481077.1	ILMN_1223354	004670133	S	274	TGGTGTCAGACCCAGTCACTTCAGTAGAGGCTCTAAGAGTCTGGCTCGCC				2qF3	PREDICTED: Mus musculus similar to ribosomal protein S19 (LOC269365), mRNA.					
Mus musculus	RefSeq	ILMN_223785	ILMN_223785	9130011E15RIK	NM_198296.2	NM_198296.2		71617	139947659	NM_198296.2	9130011E15Rik	NP_938038.2	ILMN_1233304	004760594	S	2797	GTCAGCACAATAGGCCCACAACTTTAGCCTTGCCTTTTTAGTCTGTTTTA	19	-	45965801-45965824:45966556-45966581	19qC3	Mus musculus RIKEN cDNA 9130011E15 gene (9130011E15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI431055; AW050122	AI431055; AW050122
Mus musculus	RefSeq	ILMN_215166	ILMN_215166	CHUK	NM_007700.1	NM_007700.1		12675	6680941	NM_007700.1	Chuk	NP_031726.1	ILMN_2656282	001260068	S	2742	GCTGACAAGTAAAATTGCTCTTCCTGAAGACTAAGCCCAGCCTCCTTGTG	19	-	44148500-44148549	19qC3	Mus musculus conserved helix-loop-helix ubiquitous kinase (Chuk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IMP]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IMP]; The process of introducing a phosphate group into an I-kappaB protein [goid 7252] [evidence TAS]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA];  [goid 4702] [evidence TAS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + IkappaB protein = ADP + IkappaB phosphoprotein [goid 8384] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Fbx24; IKKalpha; IKK-1; Fbxo24; AI256658; IKK1; Chuk1; IKK[a]; IKK-alpha	Fbx24; IKKalpha; IKK-1; Fbxo24; AI256658; IKK1; Chuk1; IKK[a]; IKK-alpha
Mus musculus	MEEBO	ILMN_193372	ILMN_193372	1700112M01RIK	scl27714.2.1_67						1700112M01Rik		ILMN_1241578	006280040	S	7	AGATAACTTGAATCCAAGCGACCAGAACAGCAGTACAGCAGGCTCTCCCC										
Mus musculus	Riken	ILMN_203139	ILMN_203139	HYAL1	ri|4732472K22|PX00052C15|AK028942|2688					AK028942	Hyal1		ILMN_1253049	007200309	S	2333	CTTAAAGCCTGGTGTTTGAGATTTGGGGGGAAGGGGGGAGAGGGCTGTCC						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196752	ILMN_196752	H2-Q5	NM_010393.1	NM_010393.1		15016	6754137	NM_010393.1	H2-Q5	NP_034523.1	ILMN_2685581	006980075	S	885	CTGAGATGGGAGCCTCCTTCATCCACCAAGACTAACACAGTAATCATTGC	17	+	34991176-34991186:34991314-34991352		Mus musculus histocompatibility 2, Q region locus 5 (H2-Q5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			H-2Q5; Qa-5; Qat-5; Qa5	H-2Q5; Qa-5; Qat-5; Qa5
Mus musculus	RefSeq	ILMN_196752	ILMN_196752	H2-Q5	NM_010393.1	NM_010393.1		15016	6754137	NM_010393.1	H2-Q5	NP_034523.1	ILMN_2862706	003130240	S	961	GTCATCCTTGGAGCTGTGGTGGCTTTTGTGATGAAGAGGAGGAGAAACAC	17	+	34991379-34991428		Mus musculus histocompatibility 2, Q region locus 5 (H2-Q5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			H-2Q5; Qa-5; Qat-5; Qa5	H-2Q5; Qa-5; Qat-5; Qa5
Mus musculus	MEEBO	ILMN_185399	ILMN_185399	ZFP106	scl020402.3_53				46849711	NM_011743	Zfp106		ILMN_1259839	002680687	S	5	GTCCAAAACAGGAACACATCTCCCAGAGCCAAACCTCAATAGCGCTCGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect [goid 1515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]		
Mus musculus	MEEBO	ILMN_195794	ILMN_195794	C030027H14RIK	scl5203.1.1_176						C030027H14Rik		ILMN_1239464	002190187	S	8	CCATCCTGTCCCTTGCTCTGTACCGGTTCTCTCTGAGGTGAGGAGAAAAG										
Mus musculus	RefSeq	ILMN_222013	ILMN_222013	MYT1	NM_008665.3	NM_008665.3		17932	118130724	NM_008665.3	Myt1	NP_032691.2	ILMN_2798973	000870086	S	5384	TGGCCAAGCTGCCCAGGATCTTGATACCCCAATACTGTGACCCTCCTTCC	2	+	181562348-181562397	2qH4	Mus musculus myelin transcription factor 1 (Myt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	NZF-2a; mKIAA0835; Nztf2; NZF-2b; Nzf2	NZF-2a; mKIAA0835; Nztf2; NZF-2b; Nzf2
Mus musculus	MEEBO	ILMN_194257	ILMN_194257	5730409N16RIK	scl0070475.1_40						5730409N16Rik		ILMN_2504790	006280010	S	10	GGTCTCTTTTGAAGCCTGTTAGGGTCACTGAAAGCTATCTTTGTGCCGGG										
Mus musculus	RefSeq	ILMN_240724	ILMN_240724	ZFP764	NM_146203.2	NM_146203.2		233893	31981906	NM_146203.2	Zfp764	NP_666315.2	ILMN_2960774	006250075	S	921	ACCATTTTGTTGCCCCGACTGCAACAAATCCTTCAGCCGGTCTTCTTCCC	7	-	127196353-127196402	7qF3	Mus musculus zinc finger protein 764 (Zfp764), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC31213; 8030466O12Rik	MGC31213; 8030466O12Rik
Mus musculus	MEEBO	ILMN_190007	ILMN_190007	AASDHPPT	scl36277.6_45				21735430	NM_026276	Aasdhppt		ILMN_2644455	002000576	S	1432	AGTTACTGTCTTGTATGACATCTGTTTAAGGTATCAACATTGCAACACTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass [goid 9059] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: CoA + substrate-serine = adenosine 3',5'-bisphosphate + substrate-serine-4'-phosphopantetheine. The transfer of the 4'-phosphopantetheine (Ppant) co-factor from coenzyme A to the hydroxyl side chain of the serine residue of acyl- or peptidyl-carrier protein (ACP or PCP) to convert them from the apo to the holo form [goid 8897] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217319	ILMN_217319	USP46	NM_177561.3	NM_177561.3		69727	118130433	NM_177561.3	Usp46	NP_808229.1	ILMN_2681814	004670431	S	911	AACAGCTCCACAGGTACACCAAGCTGTCTTACCGGGTGGTCTTCCCTCTG	5	-	74399264-74399313	5qC3.3	Mus musculus ubiquitin specific peptidase 46 (Usp46), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	1190009E20Rik; 2410018I08Rik; AI451644	1190009E20Rik; 2410018I08Rik; AI451644
Mus musculus	RefSeq	ILMN_190707	ILMN_230993	MSR1	NM_031195.2	NM_031195.2		20288	85861253	NM_031195.2	Msr1	NP_112472.2	ILMN_2619240	006180196	S	1693	TTATAAGACTAATTACCTCTAGGAGATACAAATACATCAGTTATAAACAA	8	-	40690706-40690755	8qA4	Mus musculus macrophage scavenger receptor 1 (Msr1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Scara1; SR-AII; MSR-A; Scvr; MSR; SR-AI	Scara1; SR-AII; MSR-A; Scvr; MSR; SR-AI
Mus musculus	RefSeq	ILMN_210760	ILMN_210760	CD55	NM_010016.2	NM_010016.2		13136	114326521	NM_010016.2	Cd55	NP_034146.2	ILMN_1248714	001090064	S	1078	CCCAGCATGTACCTGTTACCAAGACAACAGTACGTCATCCAATAAGAACA	1	-	132344932-132344981	1qE4	Mus musculus CD55 antigen (Cd55), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]		Daf1; Daf-GPI; Daf; GPI-DAF	Daf1; Daf-GPI; Daf; GPI-DAF
Mus musculus	RefSeq	ILMN_217280	ILMN_217280	MAPRE2	NM_153058.2	NM_153058.2		212307	31543238	NM_153058.2	Mapre2	NP_694698.2	ILMN_2909378	001660270	S	3568	CCACTGTCAGATTGGAAGTGACCGAAGCAGGGGATGAAGAGAAAGCTCAC	18	+	24036409-24036458	18qA2	Mus musculus microtubule-associated protein, RP/EB family, member 2 (Mapre2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]	RP1; EB1; C820009F03Rik; D18Abb1e; AI314113; EB2	RP1; EB1; C820009F03Rik; D18Abb1e; AI314113; EB2
Mus musculus	RefSeq	ILMN_188870	ILMN_214495	DLC1	NM_015802.2	NM_015802.2		50768	113195691	NM_015802.2	Dlc1	NP_056617.2	ILMN_1227039	001660138	S	4247	GACTAGTTCAAGGCTAACCACCAAGCTTCCCTTTGACTGGCTCCAAAGGC	8	-	37632598-37632647	8qA4	Mus musculus deleted in liver cancer 1 (Dlc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process by which the anatomical structure of the hindbrain is generated and organized. Morphogenesis pertains to the creation of form. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions [goid 21575] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	STARD12; Arhgap7; HP	STARD12; Arhgap7; HP
Mus musculus	RefSeq	ILMN_214495	ILMN_214495	DLC1	NM_015802.2	NM_015802.2		50768	113195691	NM_015802.2	Dlc1	NP_056617.2	ILMN_2648569	003420332	S	116	TGCCCGAGCTGGGGCGAAGCGTAAGGAAGCTGCGAACCAGGATGTGCTGA	8	-	37676763-37676812	8qA4	Mus musculus deleted in liver cancer 1 (Dlc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process by which the anatomical structure of the hindbrain is generated and organized. Morphogenesis pertains to the creation of form. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions [goid 21575] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	STARD12; Arhgap7; HP	STARD12; Arhgap7; HP
Mus musculus	RefSeq	ILMN_210878	ILMN_210878	SNRPD1	NM_009226.4	NM_009226.4		20641	145966689	NM_009226.4	Snrpd1	NP_033252.1	ILMN_1225361	005910139	S	25	CGCTTTTCCGGCCATTCATAACCCCAGTCCGTGGATCTCTGGAGCCTGAA				18qA1	Mus musculus small nuclear ribonucleoprotein D1 (Snrpd1), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]		SMD1; AA407109; AL023031	SMD1; AA407109; AL023031
Mus musculus	RefSeq	ILMN_190569	ILMN_190569	TTC16	NM_177384.1	NM_177384.1		338348	28893556	NM_177384.1	Ttc16	NP_796358.1	ILMN_2471317	001980010	S	2734	CTTCTTGGAACTGACTAACCTTTTAACTCAGGAAGTCCAACAGATCCCAG	2	-	32617892-32617941	2qB	Mus musculus tetratricopeptide repeat domain 16 (Ttc16), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1200002K10Rik	1200002K10Rik
Mus musculus	RefSeq	ILMN_227322	ILMN_227322	C230029F24RIK	NM_001002792.1	NM_001002792.1		442837	50582604	NM_001002792.1	C230029F24Rik	NP_001002792.1	ILMN_3114339	001660008	A	21	TCCAAGAAAGCAGGAAACAAAGCAATGTAGGTCAGAAAACAAGCAGGAGG	1	+	49189181-49189230	1qC1.1	Mus musculus RIKEN cDNA C230029F24 gene (C230029F24Rik), mRNA.					
Mus musculus	MEEBO	ILMN_184226	ILMN_184226	1700049J03RIK	scl50146.1.6_6						1700049J03Rik		ILMN_2416897	003420408	S	6	ACGCTCCACGCAGCCCATTGGGCGCCGCCACATCCACCGGCCGCCCCTTC										
Mus musculus	MEEBO	ILMN_209842	ILMN_209842	GABRG3	scl014407.4_128	NM_008074.1			6679916	NM_008074.1	Gabrg3		ILMN_2599735	003870239	S	1339	GTCTCTGAGCTGGACTCCTACTCTCGGGTCTTCTTCCCGACATCCTTCCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215012	ILMN_330992	PRR8	NM_028234.1	NM_028234.1		381626	145966791	NM_028234.1	Prr8	NP_082510.1	ILMN_2654516	004610053	S	6076	GCAGTGTCCTTCTCACAGGGAAGTCAGACGGTGGAAGATCTGCTGCAACC				5qB1	Mus musculus proline rich 8 (Prr8), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AA386890; 6430512A10Rik; 3200001K10Rik	AA386890; 6430512A10Rik; 3200001K10Rik
Mus musculus	Riken	ILMN_205923	ILMN_205923	MRG1	ri|B130038I01|PX00158I07|AK045126|3314					AK045126	Mrg1		ILMN_1232525	006900193	S	3078	GGGAAGCCATCACGAGCGCTCATTGGGTTTCTTGCTTTGACCTGTCGTGG										
Mus musculus	RefSeq	ILMN_238017	ILMN_238017	PRM1	NM_013637.4	NM_013637.4		19118	50657349	NM_013637.4	Prm1	NP_038665.1	ILMN_2806549	002680050	S	334	CCACCGTCCGATGAAAAACAGGAGCCTGCTAAGGAACAATGCCACCTGTC	16	-	10796441-10796490	16qA1	Mus musculus protamine 1 (Prm1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nucleus [goid 6997] [evidence IMP]; The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells [goid 30261] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]	Prm-1	Prm-1
Mus musculus	RefSeq	ILMN_217793	ILMN_238017	PRM1	NM_013637.4	NM_013637.4		19118	50657349	NM_013637.4	Prm1	NP_038665.1	ILMN_2687652	003440753	S	330	AATGCCACCGTCCGATGAAAAACAGGAGCCTGCTAAGGAACAATGCCACC	16	-	10796445-10796494	16qA1	Mus musculus protamine 1 (Prm1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nucleus [goid 6997] [evidence IMP]; The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division, or during apoptosis, in eukaryotic cells [goid 30261] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]	Prm-1	Prm-1
Mus musculus	RefSeq	ILMN_194838	ILMN_235333	3110021N24RIK	XM_897870.3	XM_897870.3		73133	149252839	XM_897870.3	3110021N24Rik	XP_902963.1	ILMN_1252656	003800056	S	915	CCCTCCAAGAAGGTATGTGAATGCTTTCGTCACTCGTCTCCGAGAGCGGG	4	+	108453577-108453626	4qC7	PREDICTED: Mus musculus RIKEN cDNA 3110021N24 gene (3110021N24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_192666	ILMN_235333	3110021N24RIK	XM_897870.3	XM_897870.3		73133	149252839	XM_897870.3	3110021N24Rik	XP_902963.1	ILMN_1259861	002810209	S	1294	GTTGTCCTGAAACCGATAAACAACTTAAAGGTAAGAAAAGACTCATCCTT	4	+	108453956-108454005	4qC7	PREDICTED: Mus musculus RIKEN cDNA 3110021N24 gene (3110021N24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215159	ILMN_224994	PRSS33	XM_979978.1	XM_979978.1		353130	94403485	XM_979978.1	Prss33	XP_985072.1	ILMN_1231590	004200722	S	987	CTTCTATCACTCAGGGATCTTCTGTGAGTCCCCTGCACTTACACTCTGCT				17qA3.3	PREDICTED: Mus musculus protease, serine, 33, transcript variant 3 (Prss33), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	Riken	ILMN_202469	ILMN_202469	5830436K05RIK	ri|5830436K05|PX00039D16|AK017975|1565					AK017975	5830436K05RIK		ILMN_2549852	000130661	S	1394	CTGACTGGGAGGATTCCCTGGGATGTAGGTTGACCCTGGGGAGATAAAAA										
Mus musculus	RefSeq	ILMN_201074	ILMN_201074	LOC381986	XM_356036.1	XM_356036.1			38088610	XM_356036.1	LOC381986		ILMN_2540983	000510369	S	716	GGGGACATACGGACTTCTCCCAGGAGCACCTATCAAATGAGAGCGAGGAG										
Mus musculus	RefSeq	ILMN_222148	ILMN_222148	KIF4	NM_008446.1	NM_008446.1		16571	6680567	NM_008446.1	Kif4	NP_032472.1	ILMN_2747641	001770168	S	3891	GTGGCCGAGCAGGACAATGAGGACAGTGACGACCATGCTGATGAGGAGTG	X	+	97913913-97913962	XqC3	Mus musculus kinesin family member 4 (Kif4), mRNA.	Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Kns4; D330050K22Rik; AI323435	Kns4; D330050K22Rik; AI323435
Mus musculus	RefSeq	ILMN_222148	ILMN_222148	KIF4	NM_008446.1	NM_008446.1		16571	6680567	NM_008446.1	Kif4	NP_032472.1	ILMN_1232030	006520215	S	3888	CTGTGGCCGAGCAGGACAATGAGGACAGTGACGACCATGCTGATGAGGAG	X	+	97913910-97913959	XqC3	Mus musculus kinesin family member 4 (Kif4), mRNA.	Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Kns4; D330050K22Rik; AI323435	Kns4; D330050K22Rik; AI323435
Mus musculus	RefSeq	ILMN_222148	ILMN_222148	KIF4	NM_008446.1	NM_008446.1		16571	6680567	NM_008446.1	Kif4	NP_032472.1	ILMN_1220039	006660050	S	4645	GGAGAGAGAACCAACTGACCTGCCTGATAAGTCTAGAGGAGCCAGTCCCC	X	+	97922215-97922264	XqC3	Mus musculus kinesin family member 4 (Kif4), mRNA.	Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Kns4; D330050K22Rik; AI323435	Kns4; D330050K22Rik; AI323435
Mus musculus	RefSeq	ILMN_221911	ILMN_233001	OLFR606	NM_147094.1	NM_147094.1		259098	22128780	NM_147094.1	Olfr606	NP_667305.1	ILMN_2741953	000990041	S	563	GCCTTGCCTGCGCTGACATCAGGTTTAATGTTATATACGGAATGGTGGTG	7	+	110600415-110600464	7qE3	Mus musculus olfactory receptor 606 (Olfr606), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR17-2	MOR17-2
Mus musculus	RefSeq	ILMN_223710	ILMN_223710	SGSM3	NM_134091.1	NM_134091.1		105835	19527317	NM_134091.1	Sgsm3	NP_598852.1	ILMN_2987294	004260253	S	2570	TGGGCCTCCCCAGTTCAGGCTACCACGGCTGTCAAAAGCATACAGTGGTG	15	+	80842333-80842382	15qE1	Mus musculus small G protein signaling modulator 3 (Sgsm3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 45732] [evidence IDA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cip85; BB175482; AI428557; R75178; 1810012I01Rik; RUSC3	Cip85; BB175482; AI428557; R75178; 1810012I01Rik; RUSC3
Mus musculus	RefSeq	ILMN_224257	ILMN_226690	STXBP6	NM_144552.2	NM_144552.2		217517	84370281	NM_144552.2	Stxbp6	NP_653135.2	ILMN_2777454	007320546	S	1430	GTAGTTCAAATACGAAATTCAGACCAAATAATAAGCCATGTATAAATTGG	12	-	45725617-45725666	12qB3	Mus musculus syntaxin binding protein 6 (amisyn) (Stxbp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		MGC30948; BC024598	MGC30948; BC024598
Mus musculus	Riken	ILMN_206084	ILMN_206084	E230027K01RIK	ri|E230027K01|PX00210L05|AK054197|2665					AK054197	E230027K01Rik		ILMN_1257307	000870079	S	2497	GTGTCTCCGAGGAAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGAT										
Mus musculus	MEEBO	ILMN_195610	ILMN_195610	DPPA4	scl49054.1_6				21312073	NM_028610	Dppa4		ILMN_1248480	001470450	S	381	CTCCTTGCAAGGGCTTTCCCAGAACAATTGCTGGAGTTGAGGAACGTCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_185807	ILMN_185807	V1RE8	NM_134197.1	NM_134197.1		171231	21717708	NM_134197.1	V1re8	NP_598958.1	ILMN_1217421	004490114	S	677	GGCACAAACAGCAAGTTCAATACGTCCGCAGTACTCATGCTTCCCCTAGC	17	+	20984191-20984240	17qA3.2	Mus musculus vomeronasal 1 receptor, E8 (V1re8), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_210545	ILMN_245096	MORN5	NM_029309.2	NM_029309.2		75495	118130578	NM_029309.2	Morn5	NP_083585.1	ILMN_2712454	002710524	S	506	ACATGAGTGGATTGTCAGGACCTGCCGCAAGGGCTGGTTGCCAATGCCCA	2	+	35935045-35935094	2qB	Mus musculus MORN repeat containing 5 (Morn5), mRNA.				RP23-169L4.2	RP23-169L4.2
Mus musculus	RefSeq	ILMN_210545	ILMN_245096	MORN5	NM_029309.2	NM_029309.2		75495	118130578	NM_029309.2	Morn5	NP_083585.1	ILMN_1253329	006620356	S	309	GACAGCTATGACCGGAGGTTCTACACCGAGATCTGCTATGGCCTGAAGCC	2	+	35910538-35910587	2qB	Mus musculus MORN repeat containing 5 (Morn5), mRNA.				RP23-169L4.2	RP23-169L4.2
Mus musculus	RefSeq	ILMN_219470	ILMN_219470	TAS1R1	NM_031867.1	NM_031867.1		110326	13994191	NM_031867.1	Tas1r1	NP_114073.1	ILMN_1220280	004120672	S	2591	CGGCTTCAGCGGCTATTTCCTCCCTAAATGCTACGTGATTCTCTGCCGTC	4	-	151402245-151402294	4qE2	Mus musculus taste receptor, type 1, member 1 (Tas1r1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpr70; T1r1; TR1	Gpr70; T1r1; TR1
Mus musculus	RefSeq	ILMN_184362	ILMN_241331	IGF1R	NM_010513.2	NM_010513.2		16001	112983655	NM_010513.2	Igf1r	NP_034643.2	ILMN_1249824	006960678	S	11292	CTCCCCGTGCATTATTGGCCATGTCTCTCTGGTTCCACAAGATACCGTTG	7	+	75377867-75377916	7qD1	Mus musculus insulin-like growth factor I receptor (Igf1r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IC ]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	IGF-1R; A330103N21Rik; hyft; D930020L01; CD221	IGF-1R; A330103N21Rik; hyft; D930020L01; CD221
Mus musculus	RefSeq	ILMN_224147	ILMN_241331	IGF1R	NM_010513.2	NM_010513.2		16001	112983655	NM_010513.2	Igf1r	NP_034643.2	ILMN_1239663	005270689	S	4099	ACTACTACCGGAAAGGCGGGAAGGGGTTGCTGCCTGTGCGCTGGATGTCT	7	+	75359838-75359887	7qD1	Mus musculus insulin-like growth factor I receptor (Igf1r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IC ]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	IGF-1R; A330103N21Rik; hyft; D930020L01; CD221	IGF-1R; A330103N21Rik; hyft; D930020L01; CD221
Mus musculus	RefSeq	ILMN_219736	ILMN_219736	LRP6	NM_008514.1	NM_008514.1		16974	6678717	NM_008514.1	Lrp6	NP_032540.1	ILMN_2712949	003850192	S	5353	GCCTTTGGGTTAACTAACATTTGAGGGCCGACAAGTCGAGAACCCATGAA	6	-	134400328-134400377	6qG1	Mus musculus low density lipoprotein receptor-related protein 6 (Lrp6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence ISO]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence ISO]	Cd	Cd
Mus musculus	RefSeq	ILMN_209712	ILMN_255057	AXIN1	NM_009733.1	NM_009733.1		12005	50979283	NM_009733.1	Axin1	NP_033863.1	ILMN_1246329	004390259	S	2627	TTGTGCACCGGTGCTGAGTGTGGTACCAGCCGTGTCGGACTTGGAACTCT	17	+	26310528-26310576:26310585-26310585	17qA3.3	Mus musculus axin 1 (Axin1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IPI]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IDA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Axin; Kb; MGC132911; kinky; knobbly; Ki; Fu; fused; AI316800	Axin; Kb; MGC132911; kinky; knobbly; Ki; Fu; fused; AI316800
Mus musculus	RefSeq	ILMN_209712	ILMN_255057	AXIN1	NM_009733.1	NM_009733.1		12005	50979283	NM_009733.1	Axin1	NP_033863.1	ILMN_1217662	000290632	S	3564	GGGGGCGGTGTGTCTGGTCCCTTCCAAGTGTCCGTGTAAATATGTACATT	17	+	26324926-26324975	17qA3.3	Mus musculus axin 1 (Axin1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IPI]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IDA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Axin; Kb; MGC132911; kinky; knobbly; Ki; Fu; fused; AI316800	Axin; Kb; MGC132911; kinky; knobbly; Ki; Fu; fused; AI316800
Mus musculus	MEEBO	ILMN_185262	ILMN_185262	4930524J08RIK	scl11029.1.1_237						4930524J08Rik		ILMN_2425557	002760368	S	20	TACAAGAGCCTAACGCCGGCCACGATTCTTTGAAGTCACTATGGATTGGG										
Mus musculus	RefSeq	ILMN_187828	ILMN_187828	UCP1	NM_009463.2	NM_009463.2		22227	31981931	NM_009463.2	Ucp1	NP_033489.1	ILMN_2994373	002630639	S	650	AGAATGCAAGCCCAGAGCCATCTGCATGGGATCAAACCCCGCTACACGGG	8	+	85817890-85817939	8qC2	Mus musculus uncoupling protein 1 (mitochondrial, proton carrier) (Ucp1), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria [goid 50873] [pmid 15567149] [evidence IEP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of protons from mitochondrial intermembrane space into mitochondrial matrix, dissipating the proton gradient across the mitochondrial inner membrane established by the electron transport chain during the oxidative phosphorylation (proton leak). Proton leak uncouples the processes of electron transport/proton generation and ATP synthesis [goid 17077] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AI385626; Slc25a7; Ucp	AI385626; Slc25a7; Ucp
Mus musculus	MEEBO	ILMN_189498	ILMN_189498	GPRK6	scl44732.17_56				7242151	NM_011938	Gprk6		ILMN_2461800	003850672	S	13	TGGCCTAGCTGAGTTTGACAAGGCCTGGGCCATCTTGGGACAAAGGTGCG										
Mus musculus	RefSeq	ILMN_208742	ILMN_208742	LRRC10	NM_146242.2	NM_146242.2		237560	113930741	NM_146242.2	Lrrc10	NP_666354.1	ILMN_2589073	004830259	S	1172	ACCAAAGAACAAGACCAGCCACAGCACTCTTCCACCACGCAGGAGTAGCT	10	+	116483568-116483617	10qD2	Mus musculus leucine rich repeat containing 10 (Lrrc10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Serdin1; MGC107614; D330003I11Rik; Hrlrrp	Serdin1; MGC107614; D330003I11Rik; Hrlrrp
Mus musculus	RefSeq	ILMN_196818	ILMN_208742	LRRC10	NM_146242.2	NM_146242.2		237560	113930741	NM_146242.2	Lrrc10	NP_666354.1	ILMN_2525911	000130301	S	323	GCCTTGGATTTCAACAACTTCAAAGCTCTCCCCCGGGTGGTGTGTACCTT	10	+	116482719-116482768	10qD2	Mus musculus leucine rich repeat containing 10 (Lrrc10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Serdin1; MGC107614; D330003I11Rik; Hrlrrp	Serdin1; MGC107614; D330003I11Rik; Hrlrrp
Mus musculus	RefSeq	ILMN_214979	ILMN_324889	LOC667370	XM_001480084.1	XM_001480084.1		667370	149270758	XM_001480084.1	LOC667370	XP_001480134.1	ILMN_1246194	003460504	S	144	TCAGGGAAGGAAGTATGTCCAGTCATATGGAAGACAGGGTGTGCAACCAG				19qC1	PREDICTED: Mus musculus similar to interferon-induced protein with tetratricopeptide repeats 3 (LOC667370), mRNA.					
Mus musculus	RefSeq	ILMN_197003	ILMN_197003	LOC240761	XM_136180.1	XM_136180.1			20910640	XM_136180.1	LOC240761		ILMN_1229013	006760360	S	71	CTGTCAGCAGAAGGCACTGCCCCTTTAGAGACGGATGCTTTAGCTCTCTG										
Mus musculus	MEEBO	ILMN_223327	ILMN_223327	SEMA4D	scl020354.1_53	NM_013660.1			7305470	NM_013660.1	Sema4d		ILMN_2762582	006100382	S	2667	GCCCCTCTGTCTTCGTGGAGAGTGTTGTGTTGAGCCCATTCAGTAGCCGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence IGI]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216844	ILMN_216844	KITL	NM_013598.1	NM_013598.1		17311	7305266	NM_013598.1	Kitl	NP_038626.1	ILMN_2676022	000050343	S	5362	CGACCCTTTTGATACAGGTTTGAATTTGAAATTACATTATATAAACATAT	10	+	99562958-99563007	10qD1	Mus musculus kit ligand (Kitl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte differentiation [goid 2763] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of melanocyte differentiation [goid 45636] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence IDA]	Steel; SLF; Kitlg; Clo; Mgf; SCF; Con; Sl; SF; contrasted; Gb	Steel; SLF; Kitlg; Clo; Mgf; SCF; Con; Sl; SF; contrasted; Gb
Mus musculus	RefSeq	ILMN_216844	ILMN_216844	KITL	NM_013598.1	NM_013598.1		17311	7305266	NM_013598.1	Kitl	NP_038626.1	ILMN_2751988	006550291	S	745	TTATGTTACCCCCTGTTGCAGCCAGCTCCCTTAGGAATGACAGCAGTAGC	10	+	99543518-99543567	10qD1	Mus musculus kit ligand (Kitl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte differentiation [goid 2763] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of melanocyte differentiation [goid 45636] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence IDA]	Steel; SLF; Kitlg; Clo; Mgf; SCF; Con; Sl; SF; contrasted; Gb	Steel; SLF; Kitlg; Clo; Mgf; SCF; Con; Sl; SF; contrasted; Gb
Mus musculus	RefSeq	ILMN_200743	ILMN_200743	LOC384530	XM_357694.1	XM_357694.1			38085737	XM_357694.1	LOC384530		ILMN_2539845	004590674	S	2129	CCCTACTCCAATGTGTTCTGTGTGCTATCTGGCTAGAAGTTTCTCCTCCC										
Mus musculus	RefSeq	ILMN_223656	ILMN_223656	1810020D17RIK	NM_183251.2	NM_183251.2		66273	40254392	NM_183251.2	1810020D17Rik	NP_899074.2	ILMN_2896944	001510561	S	644	TGGGACAGATTGGTGGGAGGCTGAGGCACAGGTTTTGCACTCCAGGTTGC	7	-	104698958-104699007	7qE2	Mus musculus RIKEN cDNA 1810020D17 gene (1810020D17Rik), mRNA.				1810037D19Rik	1810037D19Rik
Mus musculus	Riken	ILMN_203404	ILMN_203404	5930400G23RIK	ri|5930400G23|PX00055M05|AK031061|2922					AK031061	5930400G23Rik		ILMN_1252245	000130451	S	2561	CAAGCAAGGAGGGGTATATGGGAAGGTTTGGAGGGAAGGGAGAAATGACG										
Mus musculus	RefSeq	ILMN_197804	ILMN_197804	LOC328548	XM_128314.3	XM_128314.3			38078326	XM_128314.3	LOC328548		ILMN_1226279	002750519	S	83	ACACCAGGGAAACTGACCAGGCCATCAAGGGTATGCTCCACAAAGCTACC										
Mus musculus	RefSeq	ILMN_235502	ILMN_235502	TMEM90A	NM_001033334.1	NM_001033334.1		627191	85362732	NM_001033334.1	Tmem90a	NP_001028506.1	ILMN_2907241	002360176	S	2326	AGCTATGGACCATCGTGCATGATTTGGGGGACCTGGCCATTTCCTTGCCC	12	-	85567149-85567198	12qD1	Mus musculus transmembrane protein 90a (Tmem90a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm261	Gm261
Mus musculus	RefSeq	ILMN_214494	ILMN_225004	GDF1	NM_008107.3	NM_008107.3		14559	118130966	NM_008107.3	Gdf1	NP_032133.2	ILMN_1236725	003520008	S	1443	GCGTCTATCACCCATCTCCGTGCTCTTCTTCGACAATAGTGACAACGTGG					Mus musculus growth differentiation factor 1 (Gdf1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Gdf-1; AI385651; UOG-1	Gdf-1; AI385651; UOG-1
Mus musculus	Riken	ILMN_205947	ILMN_205947	HPBRII-4	ri|C130087M08|PX00172M13|AK048615|3805					AK048615	HPBRII-4		ILMN_1236580	005090593	S	3640	GAGGGTGGGGGTGGGCTTAAATGCATATATTCCGAGTGCAAACCTATCTG										
Mus musculus	Riken	ILMN_206112	ILMN_206112	B430201G11RIK	ri|B430201G11|PX00071I06|AK080891|2732					AK080891	B430201G11Rik		ILMN_2577643	001500682	S	2278	GACTTGGTGCCTGAGGCCACTGTCTCCTACTTTTACCCTGTCTGTTGGGC										
Mus musculus	RefSeq	ILMN_219558	ILMN_219558	CRIP2	NM_024223.1	NM_024223.1		68337	13195645	NM_024223.1	Crip2	NP_077185.1	ILMN_2710449	002260471	S	1074	CTACCCTCACATGGTTCATGGCTATGGAGACTTTTGCTGTCAATAAATAG	12	+	114378043-114378079:114378024-114378036	12qF1	Mus musculus cysteine rich protein 2 (Crip2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CRP2; Crp; ESP1; C77570; Hlp; AW743261; 0610010I23Rik	CRP2; Crp; ESP1; C77570; Hlp; AW743261; 0610010I23Rik
Mus musculus	MEEBO	ILMN_189417	ILMN_189417	1110049L02RIK	scl35811.1.467_45						1110049L02Rik		ILMN_2461077	000070491	S	13	ATACATATATTATGAATTTGGGAGTGTTACTAGTATAGCACTTGAAGTTT										
Mus musculus	MEEBO	ILMN_194326	ILMN_194326	C430010C01	scl19766.3.1_93						C430010C01		ILMN_2505418	005130360	S	4	GGGGTGACTGAATACTCAAGTGCCTTGGAAGAAACCAGAAACCAAACTGC										
Mus musculus	Riken	ILMN_201818	ILMN_201818	ATPI	ri|2610204M17|ZX00061D11|AK011886|1013					AK011886	Atpi		ILMN_1252120	004730544	S	732	GTAGCTGCTCAAGGTTAGACTTCCCCCACTCCGGGAGACTTGCACTACTC										
Mus musculus	Riken	ILMN_206574	ILMN_206574	8030451F13RIK	ri|8030451F13|PX00103H14|AK078761|1296					AK078761	8030451F13Rik		ILMN_1238561	004920603	S	996	GCGGCAGAGCATGGCTCAGAGCATTTGACGTCCATGAAAACGAATGAGTG										
Mus musculus	MEEBO	ILMN_217249	ILMN_217249	MTVR2	scl017826.2_113				12963546	NM_023166	Mtvr2		ILMN_2680872	003610524	S	855	CCCTTAGTCTGACTGTGGGGCCCAAAGCGTCTTGCACTCCCGTTTGCATC								Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_226669	ILMN_226669	IGF2BP1	NM_009951.3	NM_009951.3		140486	118129819	NM_009951.3	Igf2bp1	NP_034081.1	ILMN_3006804	004560066	S	2680	CCGATCCACGTTTAAAAGGAGTCCTTGGGCTAAGGATAGAGCTCGCCGGG	11	-	95824097-95824146	11qD	Mus musculus insulin-like growth factor 2 mRNA binding protein 1 (Igf2bp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D11Moh45; AW549074; CRD-BP; Zbp1; Neilsen; IMP-1; Crdbp; D030026A21Rik; AL024068	D11Moh45; AW549074; CRD-BP; Zbp1; Neilsen; IMP-1; Crdbp; D030026A21Rik; AL024068
Mus musculus	RefSeq	ILMN_188100	ILMN_254853	XIRP2	NM_001024618.2	NM_001024618.2		241431	142377342	NM_001024618.2	Xirp2	NP_001019789.1	ILMN_2449798	002320376	S	11707	GAAACGTGATCTTTACAAATTCATCAAAAGGTTAGCGATGATCCCGGGGT	2	+	67364415-67364464	2qC1.3	Mus musculus xin actin-binding repeat containing 2 (Xirp2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	XIN2; 2310008C07Rik; myomaxin; Cmya3; A530024P18Rik; Gm352; 2310003D02Rik; AI452089	XIN2; 2310008C07Rik; myomaxin; Cmya3; A530024P18Rik; Gm352; 2310003D02Rik; AI452089
Mus musculus	RefSeq	ILMN_212818	ILMN_254853	XIRP2	NM_001024618.2	NM_001024618.2		241431	142377342	NM_001024618.2	Xirp2	NP_001019789.1	ILMN_1228343	001260070	S	1665	CAACTTGGACAGCTTCACTCAGTGGATGAATTGAACTTGTTACAACTCAG	2	+	67346893-67346942	2qC1.3	Mus musculus xin actin-binding repeat containing 2 (Xirp2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	XIN2; 2310008C07Rik; myomaxin; Cmya3; A530024P18Rik; Gm352; 2310003D02Rik; AI452089	XIN2; 2310008C07Rik; myomaxin; Cmya3; A530024P18Rik; Gm352; 2310003D02Rik; AI452089
Mus musculus	RefSeq	ILMN_193487	ILMN_254853	XIRP2	NM_001024618.2	NM_001024618.2		241431	142377342	NM_001024618.2	Xirp2	NP_001019789.1	ILMN_2497657	004040551	S	11700	CACGTTTCAAATCTCTTTCACAGCGCATTATTTCTTGTATGCACTCCGTA	2	+	67364408-67364457	2qC1.3	Mus musculus xin actin-binding repeat containing 2 (Xirp2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	XIN2; 2310008C07Rik; myomaxin; Cmya3; A530024P18Rik; Gm352; 2310003D02Rik; AI452089	XIN2; 2310008C07Rik; myomaxin; Cmya3; A530024P18Rik; Gm352; 2310003D02Rik; AI452089
Mus musculus	Riken	ILMN_203263	ILMN_203263	9330161M13RIK	ri|9330161M13|PX00106K08|AK034180|2120					AK034180	9330161M13Rik		ILMN_1241634	006550139	S	1730	GGGGGATTTCTTTCTTGCAGATGGATGTGGCTGCTTCTGACCACAGACCC										
Mus musculus	RefSeq	ILMN_209113	ILMN_209113	CARM1	NM_021531.2	NM_021531.2		59035	50511309	NM_021531.2	Carm1	NP_067506.2	ILMN_3003076	000060131	S	2285	AGCACAGCCAGCTGGACCTCTCCTTCAACTACCAGGCCACATGGTCACCA	9	+	21339026-21339075	9qA3	Mus musculus coactivator-associated arginine methyltransferase 1 (Carm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any series of molecular signals generated as a consequence of a steroid hormone binding to its receptor [goid 30518] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [evidence IEA]	MGC46828; Prmt4	MGC46828; Prmt4
Mus musculus	MEEBO	ILMN_184548	ILMN_184548	E430012K20RIK	scl22221.2_127				51707611	XM_130845	E430012K20Rik		ILMN_2525152	005290192	S	5656	CTGCATGTGGAGGGCACAAGGAGTGTTGTTTTGTGGAAGCTCAGATGCGT										
Mus musculus	MEEBO	ILMN_184548	ILMN_184548	E430012K20RIK	scl22221.2_127				51707611	XM_130845	E430012K20Rik		ILMN_1231517	002370600	S	5525	CTTGGGGACTCGGTGCTCTCCACGTGCTGTTGCTAAGGGGAAATGGGGAA										
Mus musculus	RefSeq	ILMN_224205	ILMN_224205	SPEER1-PS1	NR_001586.1	NR_001586.1		70896	38093635	NR_001586.1	Speer1-ps1		ILMN_3065555	000650093	I	181	CAGAGCTGCACCTCCTCATCCAGCTGAGAAATGAGCAGAGAGATCACCTG	5	+	11348762-11348811	5qA1	Mus musculus spermatogenesis associated glutamate (E)-rich protein 1, pseudogene 1 (Speer1-ps1) on chromosome 5.				Speer1-ps; 4921519H07Rik; SPEER-1	Speer1-ps; 4921519H07Rik; SPEER-1
Mus musculus	RefSeq	ILMN_224205	ILMN_224205	SPEER1-PS1	NR_001586.1	NR_001586.1		70896	38093635	NR_001586.1	Speer1-ps1		ILMN_3143494	003890482	A	800	TCTAGCAACACCTCTTGAGAAACAACTGAGGTGACTGCCCCTCCAACAGC	5	+	11351972-11352021	5qA1	Mus musculus spermatogenesis associated glutamate (E)-rich protein 1, pseudogene 1 (Speer1-ps1) on chromosome 5.				Speer1-ps; 4921519H07Rik; SPEER-1	Speer1-ps; 4921519H07Rik; SPEER-1
Mus musculus	Riken	ILMN_204826	ILMN_204826	SKD3	ri|C530047H07|PX00083N07|AK049768|2172					AK049768	Skd3		ILMN_1248442	003370368	S	1716	GAACCTAGGGCTTCAGGCATGCAAGACAAGCCAGTGAGACACGCCAGCTT										
Mus musculus	RefSeq	ILMN_210806	ILMN_210806	RBM35A	NM_194055.1	NM_194055.1		207920	34610208	NM_194055.1	Rbm35a	NP_918944.1	ILMN_2947559	003830445	S	2884	AGCCGCTCCTGCCCGAAGCTCTGAAGAACTGAGATGCCAGAGATGCTTAC	4	-	11259145-11259194	4qA1	Mus musculus RNA binding motif protein 35A (Rbm35a), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC25805; 2210008M09Rik; A630065D16; BC031468	MGC25805; 2210008M09Rik; A630065D16; BC031468
Mus musculus	RefSeq	ILMN_218659	ILMN_218659	SMYD5	NM_144918.2	NM_144918.2		232187	154689580	NM_144918.2	Smyd5	NP_659167.2	ILMN_2698652	003840079	S	1077	TACTTAGACTGCTGTCAGCGGGAGCGCAGCCGACACAGCCGACACAAGAT				6qC3	Mus musculus SET and MYND domain containing 5 (Smyd5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rai15; MGC29044; Rrg1; AW536703; NN8-4AG	Rai15; MGC29044; Rrg1; AW536703; NN8-4AG
Mus musculus	RefSeq	ILMN_214131	ILMN_214131	1700065I17RIK	NM_026099.3	NM_026099.3		67343	142388507	NM_026099.3	1700065I17Rik	NP_080375.2	ILMN_1240536	005720184	S	390	CCAGATACCAGAGCACAGTGATTTCCCACGGTTTCCGGAGGCGACTGATC	18	+	56754259-56754308	18qD3	Mus musculus RIKEN cDNA 1700065I17 gene (1700065I17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_193784	ILMN_193784	V1RC16	NM_134171.1	NM_134171.1		171189	21717670	NM_134171.1	V1rc16	NP_598932.1	ILMN_2500382	000010685	S	535	GTGACAACCTCCAGAGATGTATTTCTCGTAGGAGTCATGCTGATCACAAG	6	-	57310788-57310837	6qB3	Mus musculus vomeronasal 1 receptor, C16 (V1rc16), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_191923	ILMN_191923	ZAP70	NM_009539.2	NM_009539.2		22637	31981915	NM_009539.2	Zap70	NP_033565.2	ILMN_3005740	003360280	S	1953	CAAGCCTCCCTACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTA	1	+	36839434-36839483	1qB	Mus musculus zeta-chain (TCR) associated protein kinase (Zap70), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IMP]; The process of T cell selection that occurs in the thymus [goid 45061] [evidence IMP]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence ISO]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IGI]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process by which successful recombination of a T cell receptor beta chain into a translatable protein coding sequence leads to rescue from apoptosis and subsequent proliferation of an immature T cell [goid 43366] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IMP]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI327364; ZAP-70; TZK; 70kDa; mur; Srk; mrtle	AI327364; ZAP-70; TZK; 70kDa; mur; Srk; mrtle
Mus musculus	RefSeq	ILMN_191923	ILMN_191923	ZAP70	NM_009539.2	NM_009539.2		22637	31981915	NM_009539.2	Zap70	NP_033565.2	ILMN_1223542	002810048	S	816	AGGCGGATGGACTAATTTACCGCTTGAAGGAGGTCTGTCCCAACAGCAGC	1	+	36835247-36835296	1qB	Mus musculus zeta-chain (TCR) associated protein kinase (Zap70), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IMP]; The process of T cell selection that occurs in the thymus [goid 45061] [evidence IMP]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence ISO]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IGI]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process by which successful recombination of a T cell receptor beta chain into a translatable protein coding sequence leads to rescue from apoptosis and subsequent proliferation of an immature T cell [goid 43366] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IMP]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI327364; ZAP-70; TZK; 70kDa; mur; Srk; mrtle	AI327364; ZAP-70; TZK; 70kDa; mur; Srk; mrtle
Mus musculus	RefSeq	ILMN_191923	ILMN_191923	ZAP70	NM_009539.2	NM_009539.2		22637	31981915	NM_009539.2	Zap70	NP_033565.2	ILMN_2513870	002970544	S	1967	CCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATG	1	+	36839448-36839497	1qB	Mus musculus zeta-chain (TCR) associated protein kinase (Zap70), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IMP]; The process of T cell selection that occurs in the thymus [goid 45061] [evidence IMP]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence ISO]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IGI]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process by which successful recombination of a T cell receptor beta chain into a translatable protein coding sequence leads to rescue from apoptosis and subsequent proliferation of an immature T cell [goid 43366] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IMP]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI327364; ZAP-70; TZK; 70kDa; mur; Srk; mrtle	AI327364; ZAP-70; TZK; 70kDa; mur; Srk; mrtle
Mus musculus	RefSeq	ILMN_211221	ILMN_211221	KLK14	NM_174866.1	NM_174866.1		317653	33469048	NM_174866.1	Klk14	NP_777355.1	ILMN_2613722	001010187	S	681	TGGCTACCCAGGAGTCTACGCCAACCTGTGCAATTACCACAGCTGGATCC	7	+	50950317-50950366	7qB4	Mus musculus kallikrein related-peptidase 14 (Klk14), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MGC157618; GK14	MGC157618; GK14
Mus musculus	RefSeq	ILMN_198701	ILMN_198701	LOC244049	XM_145693.2	XM_145693.2			38086936	XM_145693.2	LOC244049		ILMN_1220160	005900750	S	1529	CAGCCCTAGAGAACTGGAAGGGCACATGGCTGAGCTTGCGTGCAGTATGC										
Mus musculus	RefSeq	ILMN_200997	ILMN_320892	LOC547210	XM_001478250.1	XM_001478250.1		547210	149272588	XM_001478250.1	LOC547210	XP_001478300.1	ILMN_2540740	006510768	S	241	GTGTGTCAGGTGGTACAGAACAAGGAACAGCTCCACCAACTCTTCAAACA	Y	+	1855249-1855298	YqA1	PREDICTED: Mus musculus similar to histone variant H2al2 (LOC547210), mRNA.					
Mus musculus	RefSeq	ILMN_221308	ILMN_221308	TLR2	NM_011905.2	NM_011905.2		24088	31981332	NM_011905.2	Tlr2	NP_036035.2	ILMN_2733733	002000131	S	2607	CTGTGTTCGTGCTTTCTGAGAACTTCGTACGGAGCGAGTGGTGCAAGTAC	3	-	83640551-83640600	3qE3	Mus musculus toll-like receptor 2 (Tlr2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor and relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2755] [evidence IGI]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octomer oligosaccharide [goid 2238] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a cell surface pattern recognition receptor (PRR). Such receptors bind for molecular patterns based on a repeating or polymeric structures, like those of polysaccharides or peptidoglycans, which are sometimes associated with potential pathogens [goid 2752] [evidence IMP]; The directed movement of chloramphenicol, a broad-spectrum antibiotic that inhibits bacterial protein synthesis, into, out of, within or between cells [goid 42892] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ly105	Ly105
Mus musculus	RefSeq	ILMN_200681	ILMN_200681	LOC383444	XM_357063.1	XM_357063.1			38085110	XM_357063.1	LOC383444		ILMN_1233955	004640053	S	520	GCGTCACTCACCAACCTGCCTCTCTTGGCTCCACAAACCTGGAAGAGGAT										
Mus musculus	MEEBO	ILMN_224106	ILMN_224106	1110005F07RIK	scl23602.11_383				31560260	NM_025383	1110005F07Rik		ILMN_2774882	004810746	S	1683	GAGGGAGCTCTGTCAGCCGGAAGTTCAGGCCACCAGACGTAGTGATTTGT										
Mus musculus	RefSeq	ILMN_209354	ILMN_209354	YOD1	NM_178691.3	NM_178691.3		226418	142352842	NM_178691.3	Yod1	NP_848806.1	ILMN_2595026	000240195	S	3199	GGGTTATGCACCGTATTTATAGAGCTTACCTTTACCACTTGAGCATCCAA	1	+	132618006-132618055	1qE4	Mus musculus YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae) (Yod1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	Hshin7; 9930028C20Rik	Hshin7; 9930028C20Rik
Mus musculus	MEEBO	ILMN_195062	ILMN_195062	MKIAA0250	scl000930.1_29	XM_129516.5			38073498	XM_129516.5	mKIAA0250		ILMN_1215748	003830053	S	1	GGACCTGTTAAAGAGTCTGGCTGCCTTGGAGGAAGAGGAAGAGCTGATCT										
Mus musculus	RefSeq	ILMN_200210	ILMN_200210	LOC385659	XM_358862.1	XM_358862.1			38080933	XM_358862.1	LOC385659		ILMN_2537961	000730743	S	915	GCTGGCTGACCAGGGTGTGTGCTGTATTGATGAGTTTGACAAGATGGCCG										
Mus musculus	RefSeq	ILMN_191653	ILMN_247571	NKAIN2	NM_001013411.1	NM_001013411.1		432450	61696137	NM_001013411.1	Nkain2	NP_001013429.1	ILMN_1251064	000110626	S	2725	GCGGGCCTTTTTAGGAGCAGTAAGCAAAGTAGTGTGATTCTAGCTGGGAA	10	-	31409351-31409400	10qA4	Mus musculus Na+/K+ transporting ATPase interacting 2 (Nkain2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			NKAIN2; 6330571D19Rik; AW455467	NKAIN2; 6330571D19Rik; AW455467
Mus musculus	RefSeq	ILMN_218691	ILMN_328985	BC053440	XR_032374.1	XR_032374.1		234344	149258863	XR_032374.1	BC053440		ILMN_2699013	006280446	S	3270	AGCACATCTTGAGAAGTCTAATTATATATTACTTCATAACTTAATCATTA	8	+	69413902-69413951	8qB3.3	PREDICTED: Mus musculus cDNA sequence BC053440 (BC053440), misc RNA.					
Mus musculus	RefSeq	ILMN_195628	ILMN_319119	LOC100043357	XM_001480351.1	XM_001480351.1		100043357	149234342	XM_001480351.1	LOC100043357	XP_001480401.1	ILMN_2517271	003520184	S	308	GCCTCGGCTCTTTGCTTCCTTAACGGTACAGAGGTTTTCGAGGAGATCTG	1	+	155746749-155746798	1qG3	PREDICTED: Mus musculus hypothetical protein LOC100043357 (LOC100043357), mRNA.					
Mus musculus	RefSeq	ILMN_208864	ILMN_208864	IL1RAP	NM_008364.1	NM_008364.1		16180	6680420	NM_008364.1	Il1rap	NP_032390.1	ILMN_2740465	007000601	S	1071	CTCAGATTTTGAGCATCAAGAAAGTCACCCCGGAGGATCTCAGGCGCAAC	16	+	26701222-26701271	16qB2	Mus musculus interleukin 1 receptor accessory protein (Il1rap), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The chemical reactions and pathways resulting in the formation of interleukin-2 [goid 42094] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IDA]	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955
Mus musculus	RefSeq	ILMN_208864	ILMN_208864	IL1RAP	NM_008364.1	NM_008364.1		16180	6680420	NM_008364.1	Il1rap	NP_032390.1	ILMN_1233678	000670315	S	2393	GACTGATTAAGCGACATACTGCCTTCCTGCTACTAAACCCCATTCGCTCT	16	+	26715714-26715763	16qB2	Mus musculus interleukin 1 receptor accessory protein (Il1rap), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The chemical reactions and pathways resulting in the formation of interleukin-2 [goid 42094] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IDA]	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955
Mus musculus	RefSeq	ILMN_208864	ILMN_208864	IL1RAP	NM_008364.1	NM_008364.1		16180	6680420	NM_008364.1	Il1rap	NP_032390.1	ILMN_1226428	002370703	S	1244	GGTAGTGGTTCTCATTGTGGTTTACCATGTTTACTGGCTGGAGATGGTCC	16	+	26710639-26710688	16qB2	Mus musculus interleukin 1 receptor accessory protein (Il1rap), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The chemical reactions and pathways resulting in the formation of interleukin-2 [goid 42094] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IDA]	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955
Mus musculus	RefSeq	ILMN_208864	ILMN_208864	IL1RAP	NM_008364.1	NM_008364.1		16180	6680420	NM_008364.1	Il1rap	NP_032390.1	ILMN_2740464	002100470	S	1069	GACTCAGATTTTGAGCATCAAGAAAGTCACCCCGGAGGATCTCAGGCGCA	16	+	26701220-26701269	16qB2	Mus musculus interleukin 1 receptor accessory protein (Il1rap), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The chemical reactions and pathways resulting in the formation of interleukin-2 [goid 42094] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IDA]	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955
Mus musculus	MEEBO	ILMN_186998	ILMN_186998	MKIAA1294	scl0003186.1_2				26006264	AB093292	mKIAA1294		ILMN_2440288	006520521	S	14	CTCTCCCATCATGGATGGGTCTGAGTCTCCAACACACCAAAGTACTGATG										
Mus musculus	RefSeq	ILMN_215964	ILMN_215964	LDHC	NM_013580.4	NM_013580.4		16833	146134382	NM_013580.4	Ldhc	NP_038608.1	ILMN_1248952	002340601	S	1085	TCACTGATCACGGCAGTCCCACTGAAAGTGTTTCCACATCATAACAAAGT				7qB4	Mus musculus lactate dehydrogenase C (Ldhc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA];  [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IEA]	Ldh3; Ldh-3; Ldhc4; Ldh-x	Ldh3; Ldh-3; Ldhc4; Ldh-x
Mus musculus	MEEBO	ILMN_218206	ILMN_218206	SRD5A1	scl078925.3_27	NM_175283.2			31341518	NM_175283.2	Srd5a1		ILMN_2692927	001090474	S	484	TGCAGAGCCGATACTTGAGCCAGTTTGCGGTGTATGCTGAAGACTGGGTA						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics [goid 6702] [evidence IMP]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor [goid 3865] [evidence IMP]		
Mus musculus	RefSeq	ILMN_221885	ILMN_221885	CCBE1	NM_178793.4	NM_178793.4		320924	124378017	NM_178793.4	Ccbe1	NP_848908.1	ILMN_2741601	000650156	S	770	CTGAACTGGGCAAGTATGTCAATGGTGACAAGGTACTGGCCTCAAACGCC	18	-	66230900-66230949	18qE1	Mus musculus collagen and calcium binding EGF domains 1 (Ccbe1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4933426F18Rik; mKIAA1983; 9430093N24Rik; MGC118667; KIAA1983	4933426F18Rik; mKIAA1983; 9430093N24Rik; MGC118667; KIAA1983
Mus musculus	RefSeq	ILMN_193911	ILMN_193911	XAB1	NM_133756.2	NM_133756.2		74254	31981573	NM_133756.2	Xab1	NP_598517.1	ILMN_2921749	004120494	S	1442	ACGTCTGTCCCAGAGACGCTTTGGACCTTGACTAGCTGGGTCTGTGGGCA	5	+	31787803-31787852	5qB1	Mus musculus XPA binding protein 1 (Xab1), mRNA.				MBDIN; NTPBP; AI449615; 2410004J02Rik	MBDIN; NTPBP; AI449615; 2410004J02Rik
Mus musculus	RefSeq	ILMN_223011	ILMN_223011	CCNT1	NM_009833.1	NM_009833.1		12455	6753315	NM_009833.1	Ccnt1	NP_033963.1	ILMN_2758087	002350482	S	1967	AAGACACTGTGAATATGCTCCACTCCCTGCTTAGTGCCCAGGGGGTTCAG	15	-	98373800-98373849	15qF1	Mus musculus cyclin T1 (Ccnt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a small nuclear RNA (snRNA) [goid 17069] [evidence IDA]	CycT1; AI115585; 2810478G24Rik	CycT1; AI115585; 2810478G24Rik
Mus musculus	RefSeq	ILMN_213920	ILMN_213920	PTGS1	NM_008969.3	NM_008969.3		19224	144227245	NM_008969.3	Ptgs1	NP_032995.1	ILMN_1224866	006620445	S	2573	CCCAACTTGAATGTCTAGAATGTGGAATTGGTTCATTTTCCTGTTCAGTG	2	+	36107498-36107547	2qB	Mus musculus prostaglandin-endoperoxide synthase 1 (Ptgs1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O [goid 4666] [evidence IEA]	Cox-1; COX1; Pghs1; Cox-3	Cox-1; COX1; Pghs1; Cox-3
Mus musculus	RefSeq	ILMN_213920	ILMN_213920	PTGS1	NM_008969.3	NM_008969.3		19224	144227245	NM_008969.3	Ptgs1	NP_032995.1	ILMN_1239239	000290722	S	1507	CCCGAGAGATGCGCCTACAGCCCTTCAATGAATACCGAAAGAGGTTTGGC	2	+	36104680-36104729	2qB	Mus musculus prostaglandin-endoperoxide synthase 1 (Ptgs1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O [goid 4666] [evidence IEA]	Cox-1; COX1; Pghs1; Cox-3	Cox-1; COX1; Pghs1; Cox-3
Mus musculus	RefSeq	ILMN_213920	ILMN_213920	PTGS1	NM_008969.3	NM_008969.3		19224	144227245	NM_008969.3	Ptgs1	NP_032995.1	ILMN_1233864	006330100	S	1358	GCAGTTTTTATTTAACACTTCTATGCTGGTGGACTATGGGGTTGAGGCAC	2	+	36100766-36100815	2qB	Mus musculus prostaglandin-endoperoxide synthase 1 (Ptgs1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O [goid 4666] [evidence IEA]	Cox-1; COX1; Pghs1; Cox-3	Cox-1; COX1; Pghs1; Cox-3
Mus musculus	MEEBO	ILMN_212686	ILMN_212686	INPP4B	scl33620.26.1_275	XM_134427.3			38089360	XM_134427.3	Inpp4b		ILMN_1226239	001090671	S	4693	CTCAAACGTGCTTCCATTTAAGAGCCATACCAGCAGGCGGATCTGCGGAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of molecular signals in which a cell uses a water-soluble inositol phosphate to convert an extracellular signal into a response [goid 48016] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence ISO]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 34597] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 3,4-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 16316] [evidence IEA]		
Mus musculus	Riken	ILMN_205038	ILMN_205038	A530095B06RIK	ri|A530095B06|PX00143O08|AK041258|3945					AK041258	A530095B06Rik		ILMN_1221761	003520414	S	3721	TGGCTGCCCAGTTACTACGGGTGCTTTTACTTTTTGCACTGGGGCTGGAG										
Mus musculus	RefSeq	ILMN_210378	ILMN_248230	OLFR703	NM_146596.1	NM_146596.1		258589	22129456	NM_146596.1	Olfr703	NP_666807.1	ILMN_1244304	002650114	S	888	GGTCACAGGGGCTTTAAGGAGAATTTTTGGAAAATGGTTGGGGCCAGCCC	7	+	113989014-113989063	7qE3	Mus musculus olfactory receptor 703 (Olfr703), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR283-7	MOR283-7
Mus musculus	RefSeq	ILMN_213787	ILMN_213787	SGK3	NM_177547.3	NM_177547.3		170755	83649752	NM_177547.3	Sgk3	NP_808215.2	ILMN_1214762	000620280	S	1667	GGAGGCAGATGATGCATTTGTTGGTTTTTCTTACGCCCCTCCTTCGGAAG	1	+	9888908-9888957	1qA2	Mus musculus serum/glucocorticoid regulated kinase 3 (Sgk3), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	A330005P07Rik; 2510015P22Rik; Cisk	A330005P07Rik; 2510015P22Rik; Cisk
Mus musculus	RefSeq	ILMN_213787	ILMN_213787	SGK3	NM_177547.3	NM_177547.3		170755	83649752	NM_177547.3	Sgk3	NP_808215.2	ILMN_2640789	006860156	S	511	GAGCAGGATTGAATGAGTTCATTCAGAACTTGGTCAGATATCCAGAGCTT	1	+	9862357-9862406	1qA2	Mus musculus serum/glucocorticoid regulated kinase 3 (Sgk3), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	A330005P07Rik; 2510015P22Rik; Cisk	A330005P07Rik; 2510015P22Rik; Cisk
Mus musculus	RefSeq	ILMN_213787	ILMN_213787	SGK3	NM_177547.3	NM_177547.3		170755	83649752	NM_177547.3	Sgk3	NP_808215.2	ILMN_1232875	000010079	S	2214	TGCTTAGTAGGATTAAAATGCAAGGGCAGATGAAGCACACTGGCTGCTAG	1	+	9889455-9889504	1qA2	Mus musculus serum/glucocorticoid regulated kinase 3 (Sgk3), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	A330005P07Rik; 2510015P22Rik; Cisk	A330005P07Rik; 2510015P22Rik; Cisk
Mus musculus	RefSeq	ILMN_213787	ILMN_213787	SGK3	NM_177547.3	NM_177547.3		170755	83649752	NM_177547.3	Sgk3	NP_808215.2	ILMN_2665359	004920553	S	1237	TCAGAAAACAGCCCTATGACAACACTGTGGACTGGTGGTGCCTGGGCGCT	1	+	9876147-9876196	1qA2	Mus musculus serum/glucocorticoid regulated kinase 3 (Sgk3), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	A330005P07Rik; 2510015P22Rik; Cisk	A330005P07Rik; 2510015P22Rik; Cisk
Mus musculus	MEEBO	ILMN_211327	ILMN_211327	E030027L17	scl00329912.1_59	NM_183300.1			34303965	NM_183300.1	E030027L17		ILMN_2614692	002350768	S	1094	GGTCCTGTGGACTTCTACGGTCTTAGTCTTGTACTCGGGTGATGTCTTCT										
Mus musculus	RefSeq	ILMN_188423	ILMN_188423	ZFP526	NM_175436.2	NM_175436.2		210172	31341898	NM_175436.2	Zfp526	NP_780645.1	ILMN_2859647	004860220	S	3207	CTTAGGCCCATCTCTATTGTGAGTAAGACTTGACCCCTCGGTGACCACAG	7	+	24936120-24936169	7qA3	Mus musculus zinc finger protein 526 (Zfp526), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D030024H03Rik; MGC106217	D030024H03Rik; MGC106217
Mus musculus	Riken	ILMN_203411	ILMN_203411	A230109H16RIK	ri|A230109H16|PX00063B22|AK039221|1403					AK039221	A230109H16Rik		ILMN_1215902	006100452	S	1089	TAAAGGAGTAAGCAGGACCGCAGCCTAGCAGTGAGAAGCCTGTCTGCATG										
Mus musculus	Riken	ILMN_202992	ILMN_202992	NTRK2	ri|4732460C10|PX00051F11|AK028827|2285					AK028827	Ntrk2		ILMN_2553897	000940114	S	2080	TCCTGCTGTGGTAATGGGCAGGTGAGGCACAGGGGAGAGAGAGTCTATGG						Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IMP]; Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light [goid 46548] [evidence IMP]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_206769	ILMN_206769	2310079N02RIK	ri|D930047C07|PX00203N14|AK086714|1511					AK086714	2310079N02Rik		ILMN_1229532	002690241	S	1111	GAACTACAGACAGTTGTGAACCACCTTGTCCTGGGAAACACAGGCCCTCT								Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_218624	ILMN_218624	RABAC1	scl00015.1_21	NM_010261.1			33859557	NM_010261.1	Rabac1		ILMN_2710112	004290762	S	379	GGCTGTCTTCTTTGGCGCCTGTTACATTCTCTATCTGCGCACGTTGCAGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209481	ILMN_209481	ANKRD13B	NM_172945.2	NM_172945.2		268445	117956382	NM_172945.2	Ankrd13b	NP_766533.2	ILMN_1247053	000240682	S	3092	GGTGCTAACCCCGGCTCTCCCTTTTCCACCCTACCCACCTAAAGAAGCAC	11	-	77284183-77284232	11qB5	Mus musculus ankyrin repeat domain 13b (Ankrd13b), mRNA.				B930093C12Rik; AW124583	B930093C12Rik; AW124583
Mus musculus	Riken	ILMN_206608	ILMN_206608	E030040L08RIK	ri|E030040L08|PX00206L11|AK087265|1360					AK087265	E030040L08Rik		ILMN_1240161	002850475	S	1055	GAAGTCAGTACCGTCCACCTCACTGTGGTTCCATGAATCAGCACAGGCTG										
Mus musculus	RefSeq	ILMN_213816	ILMN_213816	GBL	NM_019988.3	NM_019988.3		56716	142367623	NM_019988.3	Gbl	NP_064372.2	ILMN_1238928	004920092	S	3293	TTTCTTGGTGTTGCCTCCGGACTCCTGAGCTAGACACCGGAACTATCAAT	17	-	24610513-24610562	17qA3.3	Mus musculus G protein beta subunit-like (Gbl), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610033N12Rik; AI851821; AA409454; AI505104	0610033N12Rik; AI851821; AA409454; AI505104
Mus musculus	Riken	ILMN_205604	ILMN_205604	B930083D07RIK	ri|B930083D07|PX00166A07|AK047525|1772					AK047525	B930083D07Rik		ILMN_1254133	001940050	S	1571	GAATCCAGTGGAACGTAGACCTTGGCCCCAGGACAGTCAGTTGCTCTAGC										
Mus musculus	Riken	ILMN_202483	ILMN_202483	6530409L22RIK	ri|6530409L22|PX00048B09|AK018331|1125					AK018331	6530409L22Rik		ILMN_1216710	006480437	S	768	ATACAGAAATCATCACAGCCCAGTGGAGGTGCGGCTGGAACTAGAGCCCG										
Mus musculus	RefSeq	ILMN_214949	ILMN_214949	1700013G24RIK	NM_027063.2	NM_027063.2		69380	124378009	NM_027063.2	1700013G24Rik	NP_081339.1	ILMN_2653832	002100187	S	340	GGAAGATCTGCATGGGCCGCCCCTATACCTCCAAGTGTGTAGAGACGAGT	4	+	137010680-137010729	4qD3	Mus musculus RIKEN cDNA 1700013G24 gene (1700013G24Rik), mRNA.				AI507018	AI507018
Mus musculus	RefSeq	ILMN_222003	ILMN_222003	GLT1D1	NM_177005.2	NM_177005.2		319804	31342572	NM_177005.2	Glt1d1	NP_795979.1	ILMN_2743297	005900243	S	1626	GGCCAGGAAGTGAACTTTTGACCTTTCCGAATCTGCTTTCGGGAGCAGGC	5	+	127981018-127981067	5qG1.2	Mus musculus glycosyltransferase 1 domain containing 1 (Glt1d1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	5730455A04Rik	5730455A04Rik
Mus musculus	MEEBO	ILMN_184492	ILMN_184492	5033413D16RIK	scl45988.2_408						5033413D16Rik		ILMN_2419078	006940504	S	2	GCAAGGGCCGTTCTAGTAGCATGCCTGCTCCTTGGAGTTTTCCAGATTAT										
Mus musculus	RefSeq	ILMN_222051	ILMN_222051	ROBLD3	NM_031248.3	NM_031248.3		83409	42476187	NM_031248.3	Robld3	NP_112538.1	ILMN_1244381	004890592	S	438	CATAACAGCGTGATGGAGGCTGGAGTAGAAAAGGGATGATGATCTGGAGG	3	-	88353824-88353869:88353870-88353873	3qF1	Mus musculus roadblock domain containing 3 (Robld3), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2010111E04Rik; Rab25; AL022628; P14	2010111E04Rik; Rab25; AL022628; P14
Mus musculus	RefSeq	ILMN_192875	ILMN_234025	CRAT	NM_007760.3	NM_007760.3		12908	86198337	NM_007760.3	Crat	NP_031786.2	ILMN_2771339	005890102	S	609	AAGCAACTGGTGGATGAGTTTCAGACCTCAGGGGGCGTAGGGGAACGCCT	2	-	30268545-30268594	2qB	Mus musculus carnitine acetyltransferase (Crat), nuclear gene encoding mitochondrial protein, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + carnitine = CoA + O-acetylcarnitine [goid 4092] [evidence IEA]	AW107812; CARAT	AW107812; CARAT
Mus musculus	RefSeq	ILMN_192875	ILMN_234025	CRAT	NM_007760.3	NM_007760.3		12908	86198337	NM_007760.3	Crat	NP_031786.2	ILMN_2679456	000160121	S	2491	GGCTGAACAAGACTACGGCCCAGGTTCCCAATGTATCATCCACTCCATGA	2	-	30257848-30257897	2qB	Mus musculus carnitine acetyltransferase (Crat), nuclear gene encoding mitochondrial protein, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + carnitine = CoA + O-acetylcarnitine [goid 4092] [evidence IEA]	AW107812; CARAT	AW107812; CARAT
Mus musculus	RefSeq	ILMN_192875	ILMN_234025	CRAT	NM_007760.3	NM_007760.3		12908	86198337	NM_007760.3	Crat	NP_031786.2	ILMN_1220786	004780400	S	758	CTACTCCAGCCCAGGAGTGATCCTGCCCAAGCAGGACTTTGTGGATCTAC	2	-	30265489-30265538	2qB	Mus musculus carnitine acetyltransferase (Crat), nuclear gene encoding mitochondrial protein, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + carnitine = CoA + O-acetylcarnitine [goid 4092] [evidence IEA]	AW107812; CARAT	AW107812; CARAT
Mus musculus	RefSeq	ILMN_196886	ILMN_196886	LOC226887	XM_136541.2	XM_136541.2			38049396	XM_136541.2	LOC226887		ILMN_2526141	006020553	S	720	GCAGCTGATGAAGAGGGACCTAAAGAAGAAGGCAAAGGCCAAGGAATCTA										
Mus musculus	RefSeq	ILMN_219763	ILMN_219763	TUT1	NM_197993.2	NM_197993.2		70044	142350735	NM_197993.2	Tut1	NP_932110.1	ILMN_1232593	003610364	S	2623	TCCCAAGGCCTGTTCCCTGGTCTTCATCATTTTCTACAGGGTTTTATCCC	19	+	9040573-9040622	19qA	Mus musculus terminal uridylyl transferase 1, U6 snRNA-specific (Tut1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: UTP + RNA(n) = diphosphate + RNA(n+1) [goid 50265] [evidence IEA]	PAPD2; Rbm21; 2700038E08Rik	PAPD2; Rbm21; 2700038E08Rik
Mus musculus	RefSeq	ILMN_213556	ILMN_213556	SH3GL3	NM_017400.2	NM_017400.2		20408	119226238	NM_017400.2	Sh3gl3	NP_059096.2	ILMN_1256133	003710152	S	1069	AGATGAAAACTGGTATGAAGGGATGCTTCGTGGGGAATCCGGCTTCTTCC	7	+	89455415-89455464	7qD3	Mus musculus SH3-domain GRB2-like 3 (Sh3gl3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	Sh3d2c; Sh3d2c2; MGC118269; EEN-B2; SH3P13	Sh3d2c; Sh3d2c2; MGC118269; EEN-B2; SH3P13
Mus musculus	Riken	ILMN_205328	ILMN_205328	GABRG1	ri|A230092H19|PX00130C10|AK039068|1927					AK039068	Gabrg1		ILMN_1259481	002000753	S	1779	AGCTTGTTTGGCTCTCAAGCCTATGACCACTTCAGCCACTGGTAGGAAGC						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223565	ILMN_241954	6330417G02RIK	XM_355952.5	XM_355952.5		74004	149257753	XM_355952.5	6330417G02Rik	XP_355952.4	ILMN_2765846	006480195	S	1325	AAGATGAGAGAGAGATCGACTTCCTAAAGCTCCAGATCGTGGAGCAGCAG	7	+	146212514-146212563	7qF4	PREDICTED: Mus musculus RIKEN cDNA 6330417G02 gene (6330417G02Rik), mRNA.					
Mus musculus	Riken	ILMN_206852	ILMN_206852	D430013G08RIK	ri|D430013G08|PX00194I04|AK084925|992					AK084925	D430013G08Rik		ILMN_1241865	005130681	S	638	CAGACAGCAGCAGAGAGACCTGCCTTTGGGAAAGTGTCCTCCAAGAGGTG										
Mus musculus	Riken	ILMN_202650	ILMN_202650	ENAH	ri|9030215D04|PX00060F10|AK020248|776					AK020248	Enah		ILMN_1244697	005390403	S	703	TGAATCAGAGGCAGGTGGGTCTGTGAGTTTGAGGCCAGCCAGGGCTATCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence TAS]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IDA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [evidence IDA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin [goid 5522] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]		
Mus musculus	MEEBO	ILMN_213767	ILMN_213767	GP6	scl31821.8.1_20	XM_145298.2			28476917	XM_145298.2	Gp6		ILMN_2640560	004830358	S	837	CTGGTCCGGATATGCCTTGGTGCCACGATTATAATAATTTTGTTGGGGCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218315	ILMN_218315	LXN	NM_016753.4	NM_016753.4		17035	146134454	NM_016753.4	Lxn	NP_058033.2	ILMN_2694275	003520221	S	871	CTAACCCGTAGACAACCGTCAGCATGCTCGCTAACCACGTGTGTGACTGG				3qE1	Mus musculus latexin (Lxn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IMP]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IMP]	MGC144353; MGC144352	MGC144353; MGC144352
Mus musculus	RefSeq	ILMN_213210	ILMN_213210	PDCD1	NM_008798.1	NM_008798.1		18566	6679238	NM_008798.1	Pdcd1	NP_032824.1	ILMN_1260060	000070338	S	1684	CAGCAGGGAAGGAAAGGGGGATATAACCTTGACGCAAACCAACACTGGGG	1	-	95935078-95935127	1qD	Mus musculus programmed cell death 1 (Pdcd1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ly101; Pdc1; PD-1	Ly101; Pdc1; PD-1
Mus musculus	RefSeq	ILMN_223586	ILMN_223586	MFSD7A	NM_172883.2	NM_172883.2		243197	141803112	NM_172883.2	Mfsd7a	NP_766471.1	ILMN_2766105	004780138	S	1899	GAGGGCGGTGAGCTGGTCTGAGTAGAGTAGGGAACATATTCTCTGCAATG	5	-	108870632-108870681	5qF	Mus musculus major facilitator superfamily domain containing 7A (Mfsd7a), mRNA.				4732482E20Rik	4732482E20Rik
Mus musculus	RefSeq	ILMN_200599	ILMN_200599	LOC383388	XM_357024.1	XM_357024.1			38084030	XM_357024.1	LOC383388		ILMN_2539325	004010523	S	13	CCTGGGTGGTGTATGCTACAGAGTTTCTTTGCCTATGGAGTCAGGCTTGC										
Mus musculus	RefSeq	ILMN_217015	ILMN_217015	ILVBL	NM_173751.3	NM_173751.3		216136	42476077	NM_173751.3	Ilvbl	NP_776112.1	ILMN_2844370	005080458	S	2041	CCAGGGTTAGTGTGCTTGCCTCTTTGGACCAGGACTTTGTCTACCTGGAG	10	+	78042023-78042072	10qC1	Mus musculus ilvB (bacterial acetolactate synthase)-like (Ilvbl), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]	5830463I21; AI415009	5830463I21; AI415009
Mus musculus	RefSeq	ILMN_217015	ILMN_217015	ILVBL	NM_173751.3	NM_173751.3		216136	42476077	NM_173751.3	Ilvbl	NP_776112.1	ILMN_1256292	004890041	S	2176	GAGGCACCTTGGCAACCCTGGGTAGCTCTTTCCAAAAGGTTCAGCTGTAC	10	+	78042248-78042297	10qC1	Mus musculus ilvB (bacterial acetolactate synthase)-like (Ilvbl), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]	5830463I21; AI415009	5830463I21; AI415009
Mus musculus	RefSeq	ILMN_217015	ILMN_217015	ILVBL	NM_173751.3	NM_173751.3		216136	42476077	NM_173751.3	Ilvbl	NP_776112.1	ILMN_1218540	006450646	S	292	ATGGTGGAGAGAGTGTCGCAGCTGTGCTCCGAGCCCATGGTGTACGCTTT	10	+	78037445-78037494	10qC1	Mus musculus ilvB (bacterial acetolactate synthase)-like (Ilvbl), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]	5830463I21; AI415009	5830463I21; AI415009
Mus musculus	RefSeq	ILMN_217015	ILMN_217015	ILVBL	NM_173751.3	NM_173751.3		216136	42476077	NM_173751.3	Ilvbl	NP_776112.1	ILMN_2844376	006660544	S	1820	GGGCAGTGATGTAGCCTGTAGCCTGGCTTACACTGATTATCACAAGGCAG	10	+	78041785-78041834	10qC1	Mus musculus ilvB (bacterial acetolactate synthase)-like (Ilvbl), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]	5830463I21; AI415009	5830463I21; AI415009
Mus musculus	RefSeq	ILMN_217729	ILMN_232028	AMOTL2	NM_019764.2	NM_019764.2		56332	119120837	NM_019764.2	Amotl2	NP_062738.2	ILMN_2774049	007160437	S	3485	AGAAAAGTCCTCATTATGGTGCCCCCACCACAGAATGGCACCCTTAGAGG	9	+	102635041-102635090	9qF1	Mus musculus angiomotin-like 2 (Amotl2), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	MASCOT; Lccp; AW549739; mKIAA0989; C79691	MASCOT; Lccp; AW549739; mKIAA0989; C79691
Mus musculus	RefSeq	ILMN_257489	ILMN_257489	9430070O13RIK	NM_001033180.1	NM_001033180.1		77352	85701603	NM_001033180.1	9430070O13Rik	NP_001028352.1	ILMN_2975028	001510703	S	1747	TCATGGCAGGGATGCATGTGCAAGGGAGGGTATCCCCTGGCAAGTCAGAG	1	-	158201963-158202012	1qG3	Mus musculus RIKEN cDNA 9430070O13 gene (9430070O13Rik), mRNA.				Gm979	Gm979
Mus musculus	RefSeq	ILMN_239682	ILMN_239682	GPRC5A	NM_181444.3	NM_181444.3		232431	32129215	NM_181444.3	Gprc5a	NP_852109.1	ILMN_2854943	006060026	S	1818	CCCCAGACCTCTGTGTCCTTTGCCAGGAGCTCTTTGGGACATTACTGGAG	6	+	135050173-135050222	6qG1	Mus musculus G protein-coupled receptor, family C, group 5, member A (Gprc5a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Raig1; Rai3	Raig1; Rai3
Mus musculus	MEEBO	ILMN_190777	ILMN_190777	SRP54	scl024067.4_92				31981337	NM_011899	Srp54		ILMN_2473183	002370181	S	3	CGAAAATAAATGGAAGGACTATTAACTTTTCTGGAAGTGGGCTATTTAAA										
Mus musculus	RefSeq	ILMN_210718	ILMN_241008	CLASP2	NM_001081960.1	NM_001081960.1		76499	126506305	NM_001081960.1	Clasp2	NP_001075429.1	ILMN_2761128	000010301	S	4056	CCCTCCTCAAGGAAAGGACACTCAAGTACAGCTTTGGGACTCAGCTGCGG	9	+	113827244-113827293	9qF3	Mus musculus CLIP associating protein 2 (Clasp2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	1500004F14Rik; 8030404L10Rik; mKIAA0627; C77448; CLASP2beta	1500004F14Rik; 8030404L10Rik; mKIAA0627; C77448; CLASP2beta
Mus musculus	RefSeq	ILMN_210718	ILMN_241008	CLASP2	NM_001081960.1	NM_001081960.1		76499	126506305	NM_001081960.1	Clasp2	NP_001075429.1	ILMN_2608475	003190333	S	194	ATGATGAGGAATCAGTGGATGGAAATAGGCCGTCGTCAGCTGCTTCAGCC	9	+	113722272-113722321	9qF3	Mus musculus CLIP associating protein 2 (Clasp2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	1500004F14Rik; 8030404L10Rik; mKIAA0627; C77448; CLASP2beta	1500004F14Rik; 8030404L10Rik; mKIAA0627; C77448; CLASP2beta
Mus musculus	RefSeq	ILMN_200737	ILMN_200737	LOC384518	XM_357686.1	XM_357686.1			38085716	XM_357686.1	LOC384518		ILMN_1240189	002600093	S	935	CGTTTGTCCGACTGGTCGCTACTACTCCCGAATTGCAGACTTACGCCGTG										
Mus musculus	Riken	ILMN_204319	ILMN_204319	6430530L21RIK	ri|6430530L21|PX00046D22|AK032382|3186					AK032382	6430530L21Rik		ILMN_1249943	004220129	S	2901	CCTGCAGAGAGGGCCGTTTACCTGTCGGGTCTGACTAGCCTGAAACAGCA										
Mus musculus	RefSeq	ILMN_187027	ILMN_227673	EIF5B	NM_198303.2	NM_198303.2		226982	84043960	NM_198303.2	Eif5b	NP_938045.2	ILMN_2744399	000940044	S	3173	CAGACACTAAATGCTATCAAACTAGAAGAAAAAGGAGTTTATGTCCAGGC	1	+	38105662-38105711	1qB	Mus musculus eukaryotic translation initiation factor 5B (Eif5b), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	A030003E17Rik; BC018347; IF2	A030003E17Rik; BC018347; IF2
Mus musculus	RefSeq	ILMN_213219	ILMN_227673	EIF5B	NM_198303.2	NM_198303.2		226982	84043960	NM_198303.2	Eif5b	NP_938045.2	ILMN_2634841	006420064	S	5330	ATGGAAGCACACTGAAAGTGACCTGACTGCTGTGCAGAGGGCCTGGGGCT	1	+	38109957-38110006	1qB	Mus musculus eukaryotic translation initiation factor 5B (Eif5b), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	A030003E17Rik; BC018347; IF2	A030003E17Rik; BC018347; IF2
Mus musculus	RefSeq	ILMN_187027	ILMN_227673	EIF5B	NM_198303.2	NM_198303.2		226982	84043960	NM_198303.2	Eif5b	NP_938045.2	ILMN_2590722	007050309	S	3643	GTGCGTTCCAAGCAAAAATTTTGTTGACATTGGGATAGTAACAAGCATTG	1	+	38107152-38107170:38107968-38107998	1qB	Mus musculus eukaryotic translation initiation factor 5B (Eif5b), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	A030003E17Rik; BC018347; IF2	A030003E17Rik; BC018347; IF2
Mus musculus	RefSeq	ILMN_221657	ILMN_221657	OLFR1213	NM_146898.1	NM_146898.1		258900	22129090	NM_146898.1	Olfr1213	NP_667109.1	ILMN_1233473	005090035	S	804	AAACATGTTTTTATTTGCTACTATCCTGACACCATTGCTAAATCCTATGA	2	-	88813193-88813242	2qE1	Mus musculus olfactory receptor 1213 (Olfr1213), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR233-7	MOR233-7
Mus musculus	Riken	ILMN_203219	ILMN_203219	B430108N21RIK	ri|B430108N21|PX00070H21|AK046580|1460					AK046580	B430108N21Rik		ILMN_2555625	005960082	S	1087	GTTTGGTTGTGGTATGTGTCAGCTGTGTAGCCTGGCTGTCCTGGAACTCT										
Mus musculus	MEEBO	ILMN_193025	ILMN_193025	C230012O17RIK	scl24494.3.1_115				31342439	NM_176944	C230012O17Rik		ILMN_1248284	006180167	S	2684	TCCTGACTGATCTTTCTGGATTCGCAGTGGTGCTATAGAGCATGGCAGGC										
Mus musculus	MEEBO	ILMN_193025	ILMN_193025	C230012O17RIK	scl24494.3.1_115				31342439	NM_176944	C230012O17Rik		ILMN_2493449	007000546	S	20	TGTTTCAGGAACTTGTTAGACCATTTTGCAACCATGACCATCTTACAACC										
Mus musculus	RefSeq	ILMN_211549	ILMN_225651	LOC677026	XR_004996.1	XR_004996.1		677026	94369427	XR_004996.1	LOC677026		ILMN_2775273	001500255	S	605	GCTCAATACCCAGTGATAAATTCCAGATTGAGGCCATGGTGACTCTCATC					PREDICTED: Mus musculus similar to tissue-type vomeronasal neurons putative pheromone receptor V2R2 (LOC677026), mRNA.					
Mus musculus	RefSeq	ILMN_217437	ILMN_217437	ADAM7	NM_007402.2	NM_007402.2		11500	110347490	NM_007402.2	Adam7	NP_031428.2	ILMN_2683204	006220593	S	3119	GAAGCTCCTACAAGCTCTGGGTTCCTAGGTCTATCTACCTTTCTAGAGGT	14	-	69115693-69115742	14qD2	Mus musculus a disintegrin and metallopeptidase domain 7 (Adam7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	EAPI; EAP1	EAPI; EAP1
Mus musculus	RefSeq	ILMN_214371	ILMN_214371	1810029B16RIK	NM_025465.2	NM_025465.2		66282	133891762	NM_025465.2	1810029B16Rik	NP_079741.1	ILMN_2647318	006560280	S	976	GTAATTATCTGTATGTAAGAATTTGCTATTGAACTCACTCAAATAAGTAT	8	-	69000307-69000356	8qB3.2	Mus musculus RIKEN cDNA 1810029B16 gene (1810029B16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214371	ILMN_214371	1810029B16RIK	NM_025465.2	NM_025465.2		66282	133891762	NM_025465.2	1810029B16Rik	NP_079741.1	ILMN_2701207	006760291	S	1025	TTTGCAGTTTTAAAATAGATTTATGATTTTTATTTAAGAATTCTCTTTAA	8	-	69000258-69000307	8qB3.2	Mus musculus RIKEN cDNA 1810029B16 gene (1810029B16Rik), mRNA.					
Mus musculus	MEEBO	ILMN_212564	ILMN_212564	4930512M02RIK	scl40515.5.1_1	NM_029171.1			21630278	NM_029171.1	4930512M02Rik		ILMN_2627862	006020202	S	587	ACAGGGTGCCCTGTTTATACTGCAGAATTTCAGCATATATTTGACAACTC										
Mus musculus	MEEBO	ILMN_212786	ILMN_212786	DCTN4	scl067665.1_0	NM_026302.2			31542551	NM_026302.2	Dctn4		ILMN_2630293	007320743	S	14	CGTCCCTGCTGCAGTCGGAGCGGGTTCTCTATCTCGTCCAAGGAGAAAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_201120	ILMN_201120	LOC384833	XM_357886.1	XM_357886.1			38089288	XM_357886.1	LOC384833		ILMN_1219665	005310026	S	333	GAACATGCTTGGCAGTCCCTGTCTCACTGAGGAAAGTGTTGAAGGAACCG										
Mus musculus	RefSeq	ILMN_218552	ILMN_218552	NOC3L	NM_021315.1	NM_021315.1		57753	23956107	NM_021315.1	Noc3l	NP_067290.1	ILMN_1219173	000430286	S	2530	GCATGTGCATGGCAGAGACACAAGGATATGTGAGGGCCTGTTTCTGTTTG	19	-	38863978-38864027	19qC3	Mus musculus nucleolar complex associated 3 homolog (S. cerevisiae) (Noc3l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]		AF233884; Fad24	AF233884; Fad24
Mus musculus	RefSeq	ILMN_246443	ILMN_246443	CCDC109A	NM_001033259.1	NM_001033259.1		215999	85701765	NM_001033259.1	Ccdc109a	NP_001028431.1	ILMN_2863060	002350538	S	896	GATCCGAGATGACCGTGAATCCCGGCAGAGAGTGCGCCTGTTTGTAACTC	10	-	58844087-58844136	10qB4	Mus musculus coiled-coil domain containing 109A (Ccdc109a), mRNA. XM_918871	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2010012O16Rik; D130073L02Rik; AV064928; C10orf42; Gm64	2010012O16Rik; D130073L02Rik; AV064928; C10orf42; Gm64
Mus musculus	RefSeq	ILMN_214474	ILMN_214474	BST1	NM_009763.3	NM_009763.3		12182	145301544	NM_009763.3	Bst1	NP_033893.2	ILMN_2648346	001690170	S	1868	CCAAGGTGGCATCTCACATAAACTTCTCAAAACTCTCAAAGCTGTGCATC				5qB3	Mus musculus bone marrow stromal cell antigen 1 (Bst1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose [goid 3953] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	A530073F09; 114/A10; Bsta1; BP-3; CD157; Bp3; Ly65	A530073F09; 114/A10; Bsta1; BP-3; CD157; Bp3; Ly65
Mus musculus	RefSeq	ILMN_196791	ILMN_191073	ZBTB6	NM_146253.4	NM_146253.4		241322	142375919	NM_146253.4	Zbtb6	NP_666365.1	ILMN_2525819	001430370	S	305	GGCTGGAAGTTGCTGTTGTCCTGCTATACTGGAGCACTTGAAGTAAAAAG	2	-	37285144-37285193	2qB	Mus musculus zinc finger and BTB domain containing 6 (Zbtb6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC41441; A830092L04Rik; Zfp482; ZID	MGC41441; A830092L04Rik; Zfp482; ZID
Mus musculus	RefSeq	ILMN_191073	ILMN_191073	ZBTB6	NM_146253.4	NM_146253.4		241322	142375919	NM_146253.4	Zbtb6	NP_666365.1	ILMN_2475867	000730762	S	1738	GTACTGTCTTAAAACTAAAGGAGCACAATTCAAATTCACATGGGGCCAGC	2	-	37283711-37283760	2qB	Mus musculus zinc finger and BTB domain containing 6 (Zbtb6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC41441; A830092L04Rik; Zfp482; ZID	MGC41441; A830092L04Rik; Zfp482; ZID
Mus musculus	RefSeq	ILMN_220757	ILMN_220757	NSMCE2	NM_026746.2	NM_026746.2		68501	142354824	NM_026746.2	Nsmce2	NP_081022.1	ILMN_2738773	007400431	S	524	GGGAGCTGAAGAAGCAATATGGTATTCATGCAGACAGAGAGAATGATCTG	15	+	59287004-59287021:59423252-59423283	15qD1	Mus musculus non-SMC element 2 homolog (MMS21, S. cerevisiae) (Nsmce2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	AI661537; 1110014D18Rik	AI661537; 1110014D18Rik
Mus musculus	RefSeq	ILMN_220757	ILMN_220757	NSMCE2	NM_026746.2	NM_026746.2		68501	142354824	NM_026746.2	Nsmce2	NP_081022.1	ILMN_2752497	002680180	S	678	TGGCCATACATACGAAGAGGAAGCCATTGTTCGCATGATTGAATCCAAGC	15	+	59423728-59423777	15qD1	Mus musculus non-SMC element 2 homolog (MMS21, S. cerevisiae) (Nsmce2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	AI661537; 1110014D18Rik	AI661537; 1110014D18Rik
Mus musculus	RefSeq	ILMN_220757	ILMN_220757	NSMCE2	NM_026746.2	NM_026746.2		68501	142354824	NM_026746.2	Nsmce2	NP_081022.1	ILMN_1255898	007650524	S	24	AGCCACAGAAGTGGGCTGAGGAAAGGAGTCGGGGTCTGGGCGTGCGACGT	15	+	59205825-59205874	15qD1	Mus musculus non-SMC element 2 homolog (MMS21, S. cerevisiae) (Nsmce2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	AI661537; 1110014D18Rik	AI661537; 1110014D18Rik
Mus musculus	RefSeq	ILMN_210374	ILMN_210374	NSUN3	NM_178925.2	NM_178925.2		106338	31342146	NM_178925.2	Nsun3	NP_849256.1	ILMN_2604965	006280215	S	3371	CTGACCAGTGTGTTTATAGTAAATGTTTATCTCTTGGGCCTATCTAATGT	16	-	62732643-62732692	16qC1.3	Mus musculus NOL1/NOP2/Sun domain family 3 (Nsun3), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AU022521; 6720484A09Rik	AU022521; 6720484A09Rik
Mus musculus	Riken	ILMN_204457	ILMN_204457	CN1A	ri|B130007L17|PX00157C04|AK044844|1428					AK044844	Cn1a		ILMN_1230390	000610239	S	1211	GGTTCTTGCAATATAGGCCTGGCTGGTGTAGCACTCTGTAGCCCAGGCTG										
Mus musculus	RefSeq	ILMN_197954	ILMN_197954	LOC381051	XM_358494.1	XM_358494.1			38079824	XM_358494.1	LOC381051		ILMN_1258163	002900097	S	2	TGTCCGAAGGTCATCTGTATTTGTGTCTCCAAAAGGGTCCAGCCCTCGGG										
Mus musculus	RefSeq	ILMN_212759	ILMN_212759	FZR1	NM_019757.1	NM_019757.1		56371	9789958	NM_019757.1	Fzr1	NP_062731.1	ILMN_1254374	002000435	S	1401	ACTCACAGAACCAGATCCTCGTGTGGAAGTACCCGTCCCTTACGCAGGTG	10	-	80830914-80830963	10qC1	Mus musculus fizzy/cell division cycle 20 related 1 (Drosophila) (Fzr1), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the frequency, rate or extent of meiosis, the process by which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes [goid 40020] [evidence IDA]		Cdh1; HCDH; FZR; FZR2; Fyr; HCDH1; AW108046	Cdh1; HCDH; FZR; FZR2; Fyr; HCDH1; AW108046
Mus musculus	RefSeq	ILMN_212759	ILMN_212759	FZR1	NM_019757.1	NM_019757.1		56371	9789958	NM_019757.1	Fzr1	NP_062731.1	ILMN_2629971	000160446	S	1924	TGTGCCCCTCTCTGCTGCCACTCCAAACCAGAAGACCCTGGGAGGCACTG	10	-	80829904-80829953	10qC1	Mus musculus fizzy/cell division cycle 20 related 1 (Drosophila) (Fzr1), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the frequency, rate or extent of meiosis, the process by which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes [goid 40020] [evidence IDA]		Cdh1; HCDH; FZR; FZR2; Fyr; HCDH1; AW108046	Cdh1; HCDH; FZR; FZR2; Fyr; HCDH1; AW108046
Mus musculus	RefSeq	ILMN_212759	ILMN_212759	FZR1	NM_019757.1	NM_019757.1		56371	9789958	NM_019757.1	Fzr1	NP_062731.1	ILMN_2962747	001770523	S	2191	GGATTCCCAGTGTGGTGGCTGTGGCCTATGGTGTGTGCACGTGTGTATAT	10	-	80829637-80829686	10qC1	Mus musculus fizzy/cell division cycle 20 related 1 (Drosophila) (Fzr1), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the frequency, rate or extent of meiosis, the process by which the nucleus of a diploid cell divides twice forming four haploid cells, one or more of which usually function as gametes [goid 40020] [evidence IDA]		Cdh1; HCDH; FZR; FZR2; Fyr; HCDH1; AW108046	Cdh1; HCDH; FZR; FZR2; Fyr; HCDH1; AW108046
Mus musculus	RefSeq	ILMN_209121	ILMN_313188	BC059842	XM_001477657.1	XM_001477657.1		230676	149252884	XM_001477657.1	BC059842	XP_001477707.1	ILMN_2592748	000020661	S	9898	CACTTGGAGTCTGTCATCAACACAGCCTGTTTCACCCTCTGGACCCGCCT	4	-	118035939-118035988	4qD2.1	PREDICTED: Mus musculus cDNA sequence BC059842 (BC059842), mRNA.					
Mus musculus	RefSeq	ILMN_216254	ILMN_310968	LOC100048187	XM_001480136.1	XM_001480136.1		100048187	149262173	XM_001480136.1	LOC100048187	XP_001480186.1	ILMN_2669015	006420242	S	82	GGAGAAGAGGAAACACAAGAAAAAGCGCCTGGTGCAGAGCCCCAATTCCT					PREDICTED: Mus musculus similar to ribosomal protein S27 (metallopanstimulin 1) (LOC100048187), mRNA.					
Mus musculus	RefSeq	ILMN_210783	ILMN_210783	EIF4E	NM_007917.3	NM_007917.3		13684	83627716	NM_007917.3	Eif4e	NP_031943.3	ILMN_1260038	002480471	S	2365	GGGTAGCAGAGTGGAAACCATTGGCTGAGAGAAAAATGCTCTTTAAGTGG	3	+	138220046-138220095	3qG3-qH1	Mus musculus eukaryotic translation initiation factor 4E (Eif4e), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IDA]	MGC103177; eIF-4E; If4e; Eif4e-ps	MGC103177; eIF-4E; If4e; Eif4e-ps
Mus musculus	RefSeq	ILMN_217084	ILMN_319355	LOC100046744	XM_001475765.1	XM_001475765.1		100046744	149269059	XM_001475765.1	LOC100046744	XP_001475815.1	ILMN_2729870	000630279	S	6281	GTATGCCTTCCCTTGAACCTTGGCAGCATCTTGAGGGGAGAGCGTCCTCT					PREDICTED: Mus musculus similar to Serine/arginine repetitive matrix protein 2 (LOC100046744), mRNA.					
Mus musculus	RefSeq	ILMN_217084	ILMN_319355	LOC100046744	XM_001475765.1	XM_001475765.1		100046744	149269059	XM_001475765.1	LOC100046744	XP_001475815.1	ILMN_2678921	004260010	S	5095	CCCAGGGTGCCCCTTTCTGCTTATGATCGTGTTAGTGGCAGAACCTCACC					PREDICTED: Mus musculus similar to Serine/arginine repetitive matrix protein 2 (LOC100046744), mRNA.					
Mus musculus	RefSeq	ILMN_199867	ILMN_239306	LOC634731	XM_988632.2	XM_988632.2		634731	149252426	XM_988632.2	LOC634731	XP_993726.2	ILMN_1224714	002710053	S	2251	CAACACTTCTCCTGCTGACGGATATGTGGCTGCAGAAATCCTGGCCAGTG	4	-	59342462-59342511	4qB3	PREDICTED: Mus musculus similar to sushi domain containing 1 (LOC634731), mRNA.					
Mus musculus	RefSeq	ILMN_198033	ILMN_198033	LOC277044	XM_203579.2	XM_203579.2			38080706	XM_203579.2	LOC277044		ILMN_1252376	003930494	S	1099	GTCTGGCAGTTCCTTAGAAAATTGGGCATAGTACTACTGGAGGATCCAGC										
Mus musculus	RefSeq	ILMN_214930	ILMN_247974	DPH1	NM_144491.2	NM_144491.2		116905	118026918	NM_144491.2	Dph1	NP_652762.2	ILMN_2653574	003450451	S	1798	AGCTGCATCTCAGCGTCAGGCCTACCTTAAGTTCTTGGACCAGTTTGCAG	11	-	74991400-74991449	11qB5	Mus musculus DPH1 homolog (S. cerevisiae) (Dph1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310011M22Rik; 4930488F09Rik; Dph2l1; AW551873; Ovca1	2310011M22Rik; 4930488F09Rik; Dph2l1; AW551873; Ovca1
Mus musculus	RefSeq	ILMN_214930	ILMN_247974	DPH1	NM_144491.2	NM_144491.2		116905	118026918	NM_144491.2	Dph1	NP_652762.2	ILMN_1234555	003780446	S	1697	GATACTGATCGAGTCATCCCTTCTCAGGAGAGTATGCAATTGGCTAGCCG	11	-	74991501-74991550	11qB5	Mus musculus DPH1 homolog (S. cerevisiae) (Dph1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310011M22Rik; 4930488F09Rik; Dph2l1; AW551873; Ovca1	2310011M22Rik; 4930488F09Rik; Dph2l1; AW551873; Ovca1
Mus musculus	RefSeq	ILMN_222785	ILMN_238678	ANKRD53	NM_029245.1	NM_029245.1		75305	74315966	NM_029245.1	Ankrd53	NP_083521.1	ILMN_2754746	001470630	S	1342	GGCCACCCACAGAATATTCGCCTGGGTGTGCACCCAGAACCCTATAAGGA	6	+	83717923-83717972	6qC3	Mus musculus ankyrin repeat domain 53 (Ankrd53), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4930564N15Rik	4930564N15Rik
Mus musculus	MEEBO	ILMN_196256	ILMN_196256	2610019N19RIK	scl068023.2_32						2610019N19Rik		ILMN_1233665	002970100	S	11	GAGACACATTCTAACCCCACAGCCTACAATTGATTGATAAGGTAATCCAG										
Mus musculus	RefSeq	ILMN_217191	ILMN_256890	TMEM174	NM_026685.1	NM_026685.1		68344	58037110	NM_026685.1	Tmem174	NP_080961.1	ILMN_1216425	001470168	S	1990	GGCTGCCCCCAAGAGAGATACAGGAATTGTCAGGTCTTGAAGGTTTTGGT	13	-	99405068-99405117	13qD1	Mus musculus transmembrane protein 174 (Tmem174), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA986094; 0610009B10Rik	AA986094; 0610009B10Rik
Mus musculus	RefSeq	ILMN_219893	ILMN_219893	FUT7	NM_013524.2	NM_013524.2		14347	118129912	NM_013524.2	Fut7	NP_038552.1	ILMN_1244868	000130601	S	1913	GAATTAATGAGGAGCATATGGGGAAGGTGGCTGAGGGTCCCTGACTTACC	2	+	25281619-25281668	2qA3	Mus musculus fucosyltransferase 7 (Fut7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IEA]	AI853193; FucT-VII; FTVII; MGC124225; Fuc-TVII	AI853193; FucT-VII; FTVII; MGC124225; Fuc-TVII
Mus musculus	Riken	ILMN_204294	ILMN_204294	A730047M10RIK	ri|A730047M10|PX00151F13|AK043011|2345					AK043011	A730047M10Rik		ILMN_2563877	002630594	S	1976	CCTCTAGCACAGGCGCCAAGTCACTGCGTCTCCTTTAGCATGGACTTGTC										
Mus musculus	MEEBO	ILMN_194622	ILMN_194622	1810053B01RIK	scl19949.3.1_91						1810053B01Rik		ILMN_2508057	002470129	S	3	TCCACCTTCTTGACTGAAGATTGGGTGTTTTCCATATTCTGGGAACATTT										
Mus musculus	RefSeq	ILMN_223567	ILMN_223567	NFE2L3	NM_010903.1	NM_010903.1		18025	6754833	NM_010903.1	Nfe2l3	NP_035033.1	ILMN_2787212	002480204	S	1702	GGATGCCTTGATAACCCAGATAGAAACTTGAGCCGTGATGAACAGCGTGC	6	+	51407925-51407974	6qB3	Mus musculus nuclear factor, erythroid derived 2, like 3 (Nfe2l3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	Nrf3	Nrf3
Mus musculus	RefSeq	ILMN_223567	ILMN_223567	NFE2L3	NM_010903.1	NM_010903.1		18025	6754833	NM_010903.1	Nfe2l3	NP_035033.1	ILMN_2787209	007650685	S	2206	GAGAGAAGAAACTGAATAGCTCCAGTGACCAGCATCACAAACTGTCCAAC	6	+	51408429-51408443:51408444-51408478	6qB3	Mus musculus nuclear factor, erythroid derived 2, like 3 (Nfe2l3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	Nrf3	Nrf3
Mus musculus	RefSeq	ILMN_212176	ILMN_212176	PHF5A	NM_026737.3	NM_026737.3		68479	141802545	NM_026737.3	Phf5a	NP_081013.1	ILMN_1251761	004200068	S	762	TTGCAGGTGGTGCTGGGCTCGTGTTATTTTCCTTGTAAGTTGGAAGTTTC	15	-	81695782-81695831	15qE1	Mus musculus PHD finger protein 5A (Phf5a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1110007B08Rik	1110007B08Rik
Mus musculus	RefSeq	ILMN_228906	ILMN_228906	THSD4	NM_001040426.1	NM_001040426.1		207596	94536768	NM_001040426.1	Thsd4	NP_001035516.1	ILMN_3141249	000630608	A	5567	CCCAGGGAAATCAGCTGTTCCTGAGAGTTCAGTCCCATTGAGAAGGTTGC				9qB	Mus musculus thrombospondin, type I, domain containing 4 (Thsd4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	B230114P05Rik; AI585901	B230114P05Rik; AI585901
Mus musculus	RefSeq	ILMN_228906	ILMN_228906	THSD4	NM_001040426.1	NM_001040426.1		207596	94536768	NM_001040426.1	Thsd4	NP_001035516.1	ILMN_3063544	000940056	I	1324	AGGCAACCGGCTACCGCTTCTACGTCCGGCAAGCTGAGAAGGTCATCGAT				9qB	Mus musculus thrombospondin, type I, domain containing 4 (Thsd4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	B230114P05Rik; AI585901	B230114P05Rik; AI585901
Mus musculus	Riken	ILMN_207194	ILMN_207194	PIPK5K3	ri|A730074E01|PX00661C16|AK080527|1303					AK080527	Pipk5k3		ILMN_1226208	007650133	S	1056	CCTGTGAGAGTGTGCACCAGGAAAACACCAGGAAAACAGAACAGCGGAGT										
Mus musculus	RefSeq	ILMN_253710	ILMN_253710	NDST1	NM_008306.2	NM_008306.2		15531	42734443	NM_008306.2	Ndst1	NP_032332.2	ILMN_2832641	005560403	S	5908	CCCACTAACAGCCATTGTCTAGTCTGTACCTAAAGTTGTCTCCCAGCCCC	18	-	60811459-60811508	18qE1	Mus musculus N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 (Ndst1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The chemical reactions and pathways resulting in the formation of polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages [goid 271] [evidence IMP]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IMP]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence TAS]; The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence TAS]; The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process by which the anatomical structures of neurocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The neurocranium is the portion of the vertebrate skull surrounding the brain [goid 48702] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-desulfoheparin = adenosine 3',5'-bisphosphate + heparin [goid 15016] [evidence TAS]	NDST-1; 1200015G06Rik; Hsst	NDST-1; 1200015G06Rik; Hsst
Mus musculus	RefSeq	ILMN_210955	ILMN_210955	PBP2	NM_029595.3	NM_029595.3		76400	128485804	NM_029595.3	Pbp2	NP_083871.3	ILMN_1250250	002190373	S	1135	GGCTTGGCATGAGCCCGGATGCAGTCCTGAACAAAAATAGTTATTCTGGG	6	-	135259218-135259267	6qG1	Mus musculus phosphatidylethanolamine binding protein 2 (Pbp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC130303; Pebp2; AI326308; MGC130302; Pebp-2; 1700023A18Rik	MGC130303; Pebp2; AI326308; MGC130302; Pebp-2; 1700023A18Rik
Mus musculus	RefSeq	ILMN_241990	ILMN_241990	AU040320	NM_001035525.1	NM_001035525.1		100317	78482608	NM_001035525.1	AU040320	NP_001030602.1	ILMN_3097156	003940358	A	2712	CAGCCATGCTCAAGAGCGAGCTGCAGAAGCAGAAGGCTGACTTCCTCATC	4	+	126523667-126523716	4qD2.2	Mus musculus expressed sequence AU040320 (AU040320), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A730047D20Rik	A730047D20Rik
Mus musculus	RefSeq	ILMN_241990	ILMN_241990	AU040320	NM_001035525.1	NM_001035525.1		100317	78482608	NM_001035525.1	AU040320	NP_001030602.1	ILMN_3097151	007330397	A	3077	AAACCAACCTCCCGAGCAGGCAGCAAACAGAAAGGCCCCACGCTGAGCAG	4	+	126526128-126526146:126530410-126530440	4qD2.2	Mus musculus expressed sequence AU040320 (AU040320), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A730047D20Rik	A730047D20Rik
Mus musculus	RefSeq	ILMN_241990	ILMN_241990	AU040320	NM_001035525.1	NM_001035525.1		100317	78482608	NM_001035525.1	AU040320	NP_001030602.1	ILMN_3024494	000990202	I	5	AATTGCCCGAGTCTGGGGCCTGAGTGCTCGAGCTAAGGAGGAAAGGTGCG	4	+	126430803-126430852	4qD2.2	Mus musculus expressed sequence AU040320 (AU040320), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A730047D20Rik	A730047D20Rik
Mus musculus	RefSeq	ILMN_213409	ILMN_213409	RAB9	NM_019773.1	NM_019773.1		56382	9790226	NM_019773.1	Rab9	NP_062747.1	ILMN_1258125	002450487	S	18	GCCATATTGGTTCTTCTGCCCCAGTCGCTCCCTCTTGGAAGCGCTCTCGA	X	-	162917561-162917610	XqF5	Mus musculus RAB9, member RAS oncogene family (Rab9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Sid6061p; 2410064E05Rik; AI195561	Sid6061p; 2410064E05Rik; AI195561
Mus musculus	RefSeq	ILMN_213409	ILMN_213409	RAB9	NM_019773.1	NM_019773.1		56382	9790226	NM_019773.1	Rab9	NP_062747.1	ILMN_2641484	004540551	S	1205	ATTGTATTCTTGGTCTAGGAAAGTAAATTCCTACAGCAGTACTATTAAAG	X	-	162895206-162895255	XqF5	Mus musculus RAB9, member RAS oncogene family (Rab9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Sid6061p; 2410064E05Rik; AI195561	Sid6061p; 2410064E05Rik; AI195561
Mus musculus	RefSeq	ILMN_213409	ILMN_213409	RAB9	NM_019773.1	NM_019773.1		56382	9790226	NM_019773.1	Rab9	NP_062747.1	ILMN_2783918	003420725	S	1104	CAGACGACAACCTTGGCTATTCTAGAAGTACACTTAGATTGTTTTGACCC	X	-	162895307-162895356	XqF5	Mus musculus RAB9, member RAS oncogene family (Rab9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Sid6061p; 2410064E05Rik; AI195561	Sid6061p; 2410064E05Rik; AI195561
Mus musculus	RefSeq	ILMN_215184	ILMN_215184	TSSK5	NM_183099.2	NM_183099.2		73542	117676381	NM_183099.2	Tssk5	NP_898922.2	ILMN_2656489	006660435	S	1004	GGAACACCAGCCCCATCGCATGCTGAACCTGATTCGTCGAGGTCCCATCT	15	-	76203311-76203360	15qD3	Mus musculus testis-specific serine kinase 5 (Tssk5), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	1700091F14Rik	1700091F14Rik
Mus musculus	RefSeq	ILMN_218180	ILMN_218180	IGHMBP2	NM_009212.2	NM_009212.2		20589	153945807	NM_009212.2	Ighmbp2	NP_033238.2	ILMN_2692657	003060739	S	4683	CCCCACCCTGACTGTTGCTTCGTTAAAATGCTGGATTCCAAGTTTGTGTT				19qA	Mus musculus immunoglobulin mu binding protein 2 (Ighmbp2), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AEP; Smbp2; nmd; RIPE3b1; Smubp2; sma; Smbp-2; Catf1	AEP; Smbp2; nmd; RIPE3b1; Smubp2; sma; Smbp-2; Catf1
Mus musculus	RefSeq	ILMN_217566	ILMN_240392	GPX4	NM_001037741.2	NM_001037741.2		625249	90903232	NM_001037741.2	Gpx4	NP_001032830.2	ILMN_2684855	003830386	S	719	ATGGTCCCATGGAGGAGCCCCAGGTGATAGAGAAGGACCTGCCGTGCTAT	10	+	79518822-79518844:79518931-79518957	10qC1	Mus musculus glutathione peroxidase 4 (Gpx4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IDA]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence IDA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: a lipid hydroperoxide + 2 reduced glutathione = 2 H2O + lipid + 2 oxidized glutathione [goid 47066] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IDA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence ISO]	MGC103187; snGPx; 1700027O09Rik; PHGPx; mtPHGPx; MGC118087	MGC103187; snGPx; 1700027O09Rik; PHGPx; mtPHGPx; MGC118087
Mus musculus	RefSeq	ILMN_240392	ILMN_240392	GPX4	NM_001037741.2	NM_001037741.2		625249	90903232	NM_001037741.2	Gpx4	NP_001032830.2	ILMN_3100812	002480072	A	628	CAGCCCAAGGGCAGGGGCATGCTGGGAAATGCCATCAAATGGAACTTTAC	10	+	79517836-79517864:79518668-79518688	10qC1	Mus musculus glutathione peroxidase 4 (Gpx4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IDA]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence IDA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: a lipid hydroperoxide + 2 reduced glutathione = 2 H2O + lipid + 2 oxidized glutathione [goid 47066] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IDA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence ISO]	MGC103187; snGPx; 1700027O09Rik; PHGPx; mtPHGPx; MGC118087	MGC103187; snGPx; 1700027O09Rik; PHGPx; mtPHGPx; MGC118087
Mus musculus	RefSeq	ILMN_240392	ILMN_240392	GPX4	NM_001037741.2	NM_001037741.2		625249	90903232	NM_001037741.2	Gpx4	NP_001032830.2	ILMN_3027761	004890519	I	213	TCTGCTGCAAGAGCCTCCCCAGTACTGCAACAGCTCCGAGTTCCTGGGCT	10	+	79516994-79517043	10qC1	Mus musculus glutathione peroxidase 4 (Gpx4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IDA]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence IDA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: a lipid hydroperoxide + 2 reduced glutathione = 2 H2O + lipid + 2 oxidized glutathione [goid 47066] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IDA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence ISO]	MGC103187; snGPx; 1700027O09Rik; PHGPx; mtPHGPx; MGC118087	MGC103187; snGPx; 1700027O09Rik; PHGPx; mtPHGPx; MGC118087
Mus musculus	RefSeq	ILMN_220043	ILMN_220043	PLP1	NM_011123.2	NM_011123.2		18823	88196798	NM_011123.2	Plp1	NP_035253.1	ILMN_1240381	001780221	S	2380	CTGGAGCCGCAGAGAGGACAGGCAGAATTTGAAACCTAAAGAACTCCCAG	X	+	133372118-133372167	XqF1	Mus musculus proteolipid protein (myelin) 1 (Plp1), mRNA.	An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process by which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal [goid 8366] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence TAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	rsh; jp; DM20; Plp; msd; jimpy	rsh; jp; DM20; Plp; msd; jimpy
Mus musculus	RefSeq	ILMN_188210	ILMN_310327	LOC100046650	XM_001476721.1	XM_001476721.1		100046650	149254323	XM_001476721.1	LOC100046650	XP_001476771.1	ILMN_2710312	000670026	S	573	GCTTATTTGGCGTCTCCAGAGCTGTCCAGGAATTTGGTCTTGCCCGGTTC					PREDICTED: Mus musculus similar to PRELI domain containing 1 (LOC100046650), mRNA.					
Mus musculus	RefSeq	ILMN_187296	ILMN_233872	LOC637785	XM_913557.2	XM_913557.2		637785	94411156	XM_913557.2	LOC637785	XP_918650.2	ILMN_1259003	003850241	S	111	CCTCTTCTTGGTATCAACAGCTACAGGTGTCCACTCCCAGGTCCAACTGC					PREDICTED: Mus musculus similar to Ig heavy chain V region 3 precursor (LOC637785), mRNA.					
Mus musculus	RefSeq	ILMN_189655	ILMN_229959	AP1G1	NM_009677.4	NM_009677.4		11765	148539995	NM_009677.4	Ap1g1	NP_033807.2	ILMN_2745354	005080131	S	2744	GGGCTCGGCAATGCAAGATCTAGCAGAAGTGAACAATTTCCCCCCTCAGT				8qD3	Mus musculus adaptor protein complex AP-1, gamma 1 subunit (Ap1g1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes [goid 30136] [evidence ISO]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU041323; D8Ertd374e; Adtg; AW551707; AA409002	AU041323; D8Ertd374e; Adtg; AW551707; AA409002
Mus musculus	RefSeq	ILMN_198182	ILMN_198182	LOC210540	XM_140031.3	XM_140031.3			38082559	XM_140031.3	LOC210540		ILMN_1252059	006350102	S	579	CCCGTGGGAACCTCAGGAGAATGGAGGAGCAACCGAGGAAGACGTGCCTT										
Mus musculus	Riken	ILMN_205401	ILMN_205401	E030045A12RIK	ri|E030045A12|PX00206L14|AK053222|1725					AK053222	E030045A12Rik		ILMN_2572276	004890128	S	554	CATTGACTGAGCAAGGAAGGCTCAAGTTGTCCCAGAGCAGCAAGGCCCCG										
Mus musculus	MEEBO	ILMN_190755	ILMN_190755	GPRC2A-RS5	scl012379.1_30						Gprc2a-rs5		ILMN_2472994	001070408	S	9	GCCACTGTTCCAGCTCAAATAGTGAGATGGTTAATGGTATCAAGAGCCCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198591	ILMN_310183	EG630825	XM_001472389.1	XM_001472389.1		630825	149271630	XM_001472389.1	EG630825	XP_001472439.1	ILMN_1234916	007610035	S	545	AGTCCCCAGATCAGCTGCTGGCTGACTCCAGTGAACCTGAGGAAATCCAG	X	-	53209168-53209217	XqA5	PREDICTED: Mus musculus predicted gene, EG630825 (EG630825), mRNA.					
Mus musculus	MEEBO	ILMN_193964	ILMN_193964	GGN	scl000277.1_0				33186858	NM_182695	Ggn		ILMN_2776369	007610192	S	211	GACCTGGCGAATCGGAGAACTGAAGACTTAAGAGCCGGGGGGCTGAGATA						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence NAS]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [pmid 12574169] [evidence IEP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 12574169] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222931	ILMN_222931	DNAJB1	NM_018808.1	NM_018808.1		81489	9055241	NM_018808.1	Dnajb1	NP_061278.1	ILMN_1240323	004540020	S	2116	GGGCGTGAAAGTATCTGTTCTTTGGAGCTAGCCTGGTGTTCTGACCATTC	8	+	86135672-86135721	8qC2	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 1 (Dnajb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IGI]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	0610007I11Rik; Hsp40; HSPF1	0610007I11Rik; Hsp40; HSPF1
Mus musculus	RefSeq	ILMN_194493	ILMN_194493	VPS28	NM_025842.3	NM_025842.3		66914	146134931	NM_025842.3	Vps28	NP_080118.1	ILMN_1226704	002490014	S	696	CTGGAGTCCGCTTACAACGCCTTTAACCGCTTCCTACACGCCTAAGCCTC				15qD3	Mus musculus vacuolar protein sorting 28 (yeast) (Vps28), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI847241; 1110014J03Rik; D730005C08Rik	AI847241; 1110014J03Rik; D730005C08Rik
Mus musculus	RefSeq	ILMN_216876	ILMN_216876	OLFR1279	NM_146393.1	NM_146393.1		258388	33238991	NM_146393.1	Olfr1279	NP_666505.1	ILMN_1230736	005890189	S	890	GAATAGCAATTGGAAGATTAAGCAAAAGGGCTGTTTGTAGCAGATTTTGC	2	+	111147247-111147296	2qE3	Mus musculus olfactory receptor 1279 (Olfr1279), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR245-12; MGC130468	MOR245-12; MGC130468
Mus musculus	MEEBO	ILMN_214634	ILMN_214634	2210408I21RIK	scl072371.5_325	NM_028215.1			46518493	NM_028215.1	2210408I21Rik		ILMN_2650144	006380221	S	2524	ATTTCCACTTAACAATTTAACATAAATGTGTACTGTCTTAATCAAATAAA										
Mus musculus	Riken	ILMN_202665	ILMN_202665	A930008A22RIK	ri|A930008A22|PX00065K11|AK020827|891					AK020827	A930008A22Rik		ILMN_1248475	000060440	S	361	GTGGTGTCCTCTTTCTGGGTGGACATTTGTGACTCTGCCAAGCCGGGGTC										
Mus musculus	Riken	ILMN_204545	ILMN_204545	B230397F11RIK	ri|B230397F11|PX00161M18|AK046479|3215					AK046479	B230397F11Rik		ILMN_1240789	006200286	S	2951	TGTCAGTGTTTGTTGAGCAGGATTACCGGGGGGACTTGGGGAAGAGACTG										
Mus musculus	Riken	ILMN_204592	ILMN_204592	C130043I17RIK	ri|C130043I17|PX00169M11|AK048252|2352					AK048252	C130043I17Rik		ILMN_1234210	003440129	S	1868	CCCAGTGACATTTTACTTTGTTGAATAAGGAGCTGTAGTGCCAGGTGTAA										
Mus musculus	RefSeq	ILMN_198827	ILMN_198827	LOC207731	XM_142533.2	XM_142533.2			38088419	XM_142533.2	LOC207731		ILMN_1217106	005080240	S	1591	CAGAACTCACACCTTCAAGTTCACTACAGAATCCACACAGGAGAGAAACC										
Mus musculus	RefSeq	ILMN_198884	ILMN_260541	LOC234520	XR_003325.1	XR_003325.1		234520	94385245	XR_003325.1	LOC234520		ILMN_1245597	002260673	S	409	CTGCAATGCTTCCTGCACCAACTGCTTAGCTTCCAGCAGAGTCATCCATG					PREDICTED: Mus musculus similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (LOC234520), mRNA.					
Mus musculus	RefSeq	ILMN_210789	ILMN_210789	GCNT2	NM_133219.1	NM_133219.1		14538	39995103	NM_133219.1	Gcnt2	NP_573482.1	ILMN_2609197	001070242	S	354	CAACAGCTCCAGCGAAAGGACGTCTGTCACCATCTGTGATTACGGCTTGC	13	+	41013356-41013405	13qA3.3	Mus musculus glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (Gcnt2), transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R [goid 8109] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IDA]	IGnT; IGnTC; IGnTB; IGnTA; 5330430K10Rik	IGnT; IGnTC; IGnTB; IGnTA; 5330430K10Rik
Mus musculus	RefSeq	ILMN_185475	ILMN_210789	GCNT2	NM_133219.1	NM_133219.1		14538	39995103	NM_133219.1	Gcnt2	NP_573482.1	ILMN_2427324	000110722	S	3099	ATCCTAAGGCTTGCTACATCATCTGCAAGATGCAGGTCCTCATGTGGCCC	13	+	41055355-41055404	13qA3.3	Mus musculus glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (Gcnt2), transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R [goid 8109] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IDA]	IGnT; IGnTC; IGnTB; IGnTA; 5330430K10Rik	IGnT; IGnTC; IGnTB; IGnTA; 5330430K10Rik
Mus musculus	RefSeq	ILMN_209304	ILMN_210789	GCNT2	NM_133219.1	NM_133219.1		14538	39995103	NM_133219.1	Gcnt2	NP_573482.1	ILMN_1227951	006270739	S	3885	AGGAGCGTAGCATTTGCATAGCAGGGATTGTGCCTGTATCTACTGTGTCC	13	+	41056141-41056190	13qA3.3	Mus musculus glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (Gcnt2), transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R [goid 8109] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IDA]	IGnT; IGnTC; IGnTB; IGnTA; 5330430K10Rik	IGnT; IGnTC; IGnTB; IGnTA; 5330430K10Rik
Mus musculus	MEEBO	ILMN_215360	ILMN_215360	GYS3	scl014937.10_25				6680140	NM_008195	Gys3		ILMN_2658553	005890372	S	1536	TTATGAGGAATTTGTCCGCGGCTGTCACCTTGGGGTCTTCCCCTCCTACT										
Mus musculus	RefSeq	ILMN_192835	ILMN_231557	CEACAM19	NM_177036.2	NM_177036.2		319930	31342653	NM_177036.2	Ceacam19	NP_796010.1	ILMN_1239323	006420278	S	3205	TCTAAACACGTTTAACCCACATCCCAGCCGCCTTTTCCAGATAGGGCGTC	7	-	19034370-19034419	7qA3	Mus musculus CEA-related cell adhesion molecule 19 (Ceacam19), mRNA.				CEAL1; C130022P09Rik; MGC130156; MGC130130; MGC130155	CEAL1; C130022P09Rik; MGC130156; MGC130130; MGC130155
Mus musculus	RefSeq	ILMN_195878	ILMN_231393	HK1	NM_010438.2	NM_010438.2		15275	142388724	NM_010438.2	Hk1	NP_034568.1	ILMN_2644025	004150397	S	2866	CATCCACACTTCTCCAGAATCATGCACCAAACAGTGAAGGAACTGTCACC	10	-	61732762-61732804:61734337-61734343	10qB4	Mus musculus hexokinase 1 (Hk1), nuclear gene encoding mitochondrial protein, mRNA. XM_979094 XM_979123 XM_979164 XM_979202 XM_979240 XM_979287	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [evidence TAS]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [evidence IDA]	Hk1-s; BB404130; mHk1-s; Hk-1; dea	Hk1-s; BB404130; mHk1-s; Hk-1; dea
Mus musculus	RefSeq	ILMN_199597	ILMN_226195	LOC383712	XM_911155.2	XM_911155.2		383712	94366599	XM_911155.2	LOC383712	XP_916248.1	ILMN_1232692	002030246	S	30	CTACCCCTTTGCTGATGCAAGTAAGGGTGATGACCTGCATCCTGCTGGCT				2qC3	PREDICTED: Mus musculus similar to putative translation initiation factor A121/Sui1 (LOC383712), mRNA.					
Mus musculus	RefSeq	ILMN_200302	ILMN_200302	LOC386181	XM_359106.1	XM_359106.1			38081262	XM_359106.1	LOC386181		ILMN_1217619	000270082	S	45	ATCTATTGACACCTGCTCTGGAATCATGTTTGCTTCTCCGTTAACCGGAG										
Mus musculus	RefSeq	ILMN_209278	ILMN_209278	SVAL2	NM_032542.1	NM_032542.1		84543	14211543	NM_032542.1	Sval2	NP_115931.1	ILMN_3160610	003170181	S	229	ATCAAGTACCTTTCTGCTCACGCCATTTACACTTCCTGCCTTTGCAGTGC	6	+	41813812-41813861	6qB2.1	Mus musculus seminal vesicle antigen-like 2 (Sval2), mRNA.				SLP-M	SLP-M
Mus musculus	MEEBO	ILMN_212058	ILMN_212058	AA407526	scl0003945.1_36	NM_172711.1			27370037	NM_172711.1	AA407526		ILMN_2637956	005490097	S	1916	GTGGTGATATTACCCGGAAAATGAAACTTCTGAAGAGACAGTCCGAAGGG										
Mus musculus	RefSeq	ILMN_185485	ILMN_245835	SLC5A9	NM_145551.3	NM_145551.3		230612	142386140	NM_145551.3	Slc5a9	NP_663526.2	ILMN_1242204	004610010	S	3054	GCATGCCTAGGAGCCGGGATCAATGGAGATGCACAACCTGACTTTGTACC	4	-	111549167-111549216	4qD1	Mus musculus solute carrier family 5 (sodium/glucose cotransporter), member 9 (Slc5a9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AI159731; SGLT4; MGC29197	AI159731; SGLT4; MGC29197
Mus musculus	RefSeq	ILMN_199292	ILMN_225249	1700123A16RIK	XM_984400.1	XM_984400.1		73610	94388477	XM_984400.1	1700123A16Rik	XP_989494.1	ILMN_1221985	003060132	S	1316	GTATGTACTCAGTGTGGTAAAGCCTTTGCACGTTGCAGTCACCTTCATGT	10	+	81342763-81342812	10qC1	PREDICTED: Mus musculus RIKEN cDNA 1700123A16 gene (1700123A16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215565	ILMN_251664	DNAJB14	XM_924518.2	XM_924518.2		70604	94370360	XM_924518.2	Dnajb14	XP_929611.1	ILMN_2661062	003290598	S	1169	GTCGCCATGAAGCTGAAGAAGATTTGATTAAAGACTAAGCTGAGTAGTTG				3qG3	PREDICTED: Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 14, transcript variant 8 (Dnajb14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219300	ILMN_219300	SPATA9	NM_029343.3	NM_029343.3		75571	146141211	NM_029343.3	Spata9	NP_083619.1	ILMN_2706972	001500047	S	932	GGACCAATTTATATAAGCTGAATGTAAATTTAAGAAGGGACAGGGTAGGG				13qC1	Mus musculus spermatogenesis associated 9 (Spata9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		4930599C08Rik; 1700030K01Rik; A930023H06Rik	4930599C08Rik; 1700030K01Rik; A930023H06Rik
Mus musculus	RefSeq	ILMN_222693	ILMN_222693	EG328479	NM_177817.3	NM_177817.3		328479	142370587	NM_177817.3	EG328479	NP_808485.1	ILMN_1234678	003140373	S	1805	CCATGGCATGATTTATGGTAATTAAAATCTGGAAATAACTCAAACATATG	14	-	122834229-122834278	14qE5	Mus musculus predicted gene, EG328479 (EG328479), mRNA.				6530402A20; MGC161193	6530402A20; MGC161193
Mus musculus	RefSeq	ILMN_220235	ILMN_220235	4430402I18RIK	NM_198651.2	NM_198651.2		381218	119372320	NM_198651.2	4430402I18Rik	NP_941053.2	ILMN_2719487	000020437	S	1631	TCGGTCTTTTGTGCCCAAGGTAAGAATTGTTGATTAAATTCTGTCTGGGG	19	-	28998025-28998074	19qC1	Mus musculus RIKEN cDNA 4430402I18 gene (4430402I18Rik), mRNA.				AW122618	AW122618
Mus musculus	RefSeq	ILMN_187417	ILMN_228824	CDKN2D	NM_009878.3	NM_009878.3		12581	154350216	NM_009878.3	Cdkn2d	NP_034008.2	ILMN_1225214	006250600	S	944	GGTGTGTTGGACAAAGAAGGGGCTCCTACAGGCAACAGCCATCTAAACGG				9qA3	Mus musculus cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) (Cdkn2d), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	INK4d; p19; p19INK4d	INK4d; p19; p19INK4d
Mus musculus	RefSeq	ILMN_200370	ILMN_200370	LOC386346	XM_359178.1	XM_359178.1			38081446	XM_359178.1	LOC386346		ILMN_1251781	006110148	S	642	GATGCCCATGATCATACAAGAAGCATACAGAACTTCAAATAGACTGGACC										
Mus musculus	RefSeq	ILMN_199527	ILMN_199527	LOC383612	XM_357153.1	XM_357153.1			38073988	XM_357153.1	LOC383612		ILMN_1245739	001260630	S	66	CCACCACTTCGCTCGAGTGTCGCGGATGTCGAGAGTGCATCTGTTTCAGT										
Mus musculus	RefSeq	ILMN_222495	ILMN_222495	RIPK3	NM_019955.1	NM_019955.1		56532	9910533	NM_019955.1	Ripk3	NP_064339.1	ILMN_2750356	006480133	S	1541	CTCAAGTTCGGCCAAGTATGACCAAGCACAGTTCGGCAGGGGTAGGGGCT	14	-	56404054-56404103	14qC3	Mus musculus receptor-interacting serine-threonine kinase 3 (Ripk3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA];  [goid 4704] [evidence IDA]	AW107945; Rip3; 2610528K09Rik	AW107945; Rip3; 2610528K09Rik
Mus musculus	RefSeq	ILMN_210603	ILMN_210603	FKRP	NM_173430.2	NM_173430.2		243853	89941471	NM_173430.2	Fkrp	NP_775606.1	ILMN_2607313	000990632	S	2396	TCCCCCTCCCTTCTAGGAAGGGATAAACCTTCGCCATAGCTCACATTTAC	7	-	17394976-17395025	7qA2	Mus musculus fukutin related protein (Fkrp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [evidence IDA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AI847300; A830029B19Rik; AI842067; MDC1C; LGMD1I	AI847300; A830029B19Rik; AI842067; MDC1C; LGMD1I
Mus musculus	RefSeq	ILMN_211188	ILMN_243241	MAP3K10	NM_001081292.1	NM_001081292.1		269881	124486846	NM_001081292.1	Map3k10	NP_001074761.1	ILMN_2613415	003870168	S	1491	TCGACGCCTTGGCCGTGGCTTACGGTGTGGCTATGAACAAGCTGACGCTA	7	-	28450014-28450063	7qA3	Mus musculus mitogen-activated protein kinase kinase kinase 10 (Map3k10), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	BC028668; BC046514; Mlk2; MST	BC028668; BC046514; Mlk2; MST
Mus musculus	RefSeq	ILMN_196242	ILMN_254441	ARSA	NM_009713.3	NM_009713.3		11883	133893310	NM_009713.3	Arsa	NP_033843.2	ILMN_1225552	006200743	S	3297	GGTGATAAACTGATCATTCCGGGTAGAGTTAAAGGACCTGGGGACCCTGC	15	-	89303063-89303112	15qE3	Mus musculus arylsulfatase A (Arsa), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a cerebroside 3-sulfate + H2O = a cerebroside + SO4(2-) (sulfate) [goid 4098] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISO]	AW212749; ASA; C230037L18Rik; As-2; AS-A; As2; TISP73	AW212749; ASA; C230037L18Rik; As-2; AS-A; As2; TISP73
Mus musculus	RefSeq	ILMN_198593	ILMN_198593	LOC245436	XM_141784.3	XM_141784.3			38086363	XM_141784.3	LOC245436		ILMN_1216319	005340343	S	1596	GGACCGGTTGACTGCTGATGACAAACTCTTCGAAATGGCGTATAAAAAGG										
Mus musculus	Riken	ILMN_204226	ILMN_204226	ITGP	ri|A730060L24|PX00151G09|AK043151|1358					AK043151	Itgp		ILMN_1249132	006580139	S	1051	AAGCCGAGGGAAGAATAGGAATTTTTGTGACCATATACCGCCCGGCAAGC										
Mus musculus	RefSeq	ILMN_185695	ILMN_185695	TPD52L1	NM_009413.1	NM_009413.1		21987	6678408	NM_009413.1	Tpd52l1	NP_033439.1	ILMN_2434472	003460224	S	507	GCAGGGCAGAAGGCAACAGCAGCTTTCAATAACGTGGGAACTGCCATCAG	10	-	31066437-31066486	10qA4	Mus musculus tumor protein D52-like 1 (Tpd52l1), mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	D53	D53
Mus musculus	RefSeq	ILMN_185695	ILMN_185695	TPD52L1	NM_009413.1	NM_009413.1		21987	6678408	NM_009413.1	Tpd52l1	NP_033439.1	ILMN_1249224	005700433	S	218	GGAGACGGAACCGCTACAAGGAAGAGATGGGGATGCAGTAGGCAGTGCTG	10	-	31099079-31099128	10qA4	Mus musculus tumor protein D52-like 1 (Tpd52l1), mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	D53	D53
Mus musculus	MEEBO	ILMN_195858	ILMN_195858	NEK2	scl17045.9_212				6754817	NM_010892	Nek2		ILMN_2519385	006100398	S	14	AAGTCATCTTATTTATAAATTTTCCAATATAATATAAATCTATTTTGTGG						A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195858	ILMN_195858	NEK2	scl17045.9_212				6754817	NM_010892	Nek2		ILMN_2705554	006550138	S	3023	CCATTGTTTATAATTAACCAATCATCTTATTTAAAATTTTCCCAAATAAA						A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196559	ILMN_196559	DEFCR6	NM_007852.1	NM_007852.1		13240	13937346	NM_007852.1	Defcr6	NP_031878.1	ILMN_2642565	003520370	S	206	GAGGCTGCAAAGGAAGAGAACGCATGAATGGGACCTGCAGAAAGGGTCAT					Mus musculus defensin related cryptdin 6 (Defcr6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]			
Mus musculus	RefSeq	ILMN_196559	ILMN_196559	DEFCR6	NM_007852.1	NM_007852.1		13240	13937346	NM_007852.1	Defcr6	NP_031878.1	ILMN_1255021	003870639	S	202	GCAAGAGGCTGCAAAGGAAGAGAACGCATGAATGGGACCTGCAGAAAGGG					Mus musculus defensin related cryptdin 6 (Defcr6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]			
Mus musculus	RefSeq	ILMN_196559	ILMN_196559	DEFCR6	NM_007852.1	NM_007852.1		13240	13937346	NM_007852.1	Defcr6	NP_031878.1	ILMN_1254739	002320110	S	108	GGAAGAGGACCAGGCTGTGTCTGTCTCTTTTGGAGACCCAGAAGGCACTT					Mus musculus defensin related cryptdin 6 (Defcr6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]			
Mus musculus	RefSeq	ILMN_212588	ILMN_212588	ACSS1	NM_080575.1	NM_080575.1		68738	18034772	NM_080575.1	Acss1	NP_542142.1	ILMN_2628174	006200719	S	3468	CGTGGCTGAGTATAGTTACTGTGCCCTTTGAAATGGCCTAGGTTTCTAGG	2	-	150443912-150443961	2qG3	Mus musculus acyl-CoA synthetase short-chain family member 1 (Acss1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]	The chemical reactions and pathways resulting in the formation of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated [goid 6085] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IDA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AceCS2; AI788978; 1110032O15Rik; Acas2l; Acas2	AceCS2; AI788978; 1110032O15Rik; Acas2l; Acas2
Mus musculus	RefSeq	ILMN_196335	ILMN_196335	THNSL1	NM_177588.2	NM_177588.2		208967	68533244	NM_177588.2	Thnsl1	NP_808256.1	ILMN_1226652	005490575	S	2295	AGCTGCCCAGTGCTCATTGCATCCACAGCTCACTACTCCAAGTTTGCCCC	2	+	21135032-21135081	2qA3	Mus musculus threonine synthase-like 1 (bacterial) (Thnsl1), transcript variant 1, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins [goid 9088] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: ATP + shikimate = ADP + shikimate 3-phosphate [goid 4765] [evidence IEA]; Catalysis of the reaction: O-phospho-L-homoserine + H2O = L-threonine + phosphate [goid 4795] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AW413632	AW413632
Mus musculus	RefSeq	ILMN_212190	ILMN_196335	THNSL1	NM_177588.2	NM_177588.2		208967	68533244	NM_177588.2	Thnsl1	NP_808256.1	ILMN_2623788	000990544	S	3147	GATCCAAGATTAGTAATGTTTAAGATGCTTTATTAAAGTTCAGTTATAGA	2	+	21135884-21135933	2qA3	Mus musculus threonine synthase-like 1 (bacterial) (Thnsl1), transcript variant 1, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins [goid 9088] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: ATP + shikimate = ADP + shikimate 3-phosphate [goid 4765] [evidence IEA]; Catalysis of the reaction: O-phospho-L-homoserine + H2O = L-threonine + phosphate [goid 4795] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AW413632	AW413632
Mus musculus	RefSeq	ILMN_196335	ILMN_196335	THNSL1	NM_177588.2	NM_177588.2		208967	68533244	NM_177588.2	Thnsl1	NP_808256.1	ILMN_3064134	005360242	I	1744	GGGCTCGACTACTTCCGCAGATAGTTTATCATGCCTCTGCATACCTTGAG	2	+	21134481-21134530	2qA3	Mus musculus threonine synthase-like 1 (bacterial) (Thnsl1), transcript variant 1, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins [goid 9088] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: ATP + shikimate = ADP + shikimate 3-phosphate [goid 4765] [evidence IEA]; Catalysis of the reaction: O-phospho-L-homoserine + H2O = L-threonine + phosphate [goid 4795] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AW413632	AW413632
Mus musculus	RefSeq	ILMN_184970	ILMN_245162	DSG2	NM_007883.1	NM_007883.1		13511	22779878	NM_007883.1	Dsg2	NP_031909.1	ILMN_1242566	007200292	S	3732	GCTCTGTGATTATTGGGGGATGGAGTTAAGATGCTAGTTCCTCAGTGCCT	18	+	20761021-20761070	18qA2	Mus musculus desmoglein 2 (Dsg2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D18Ertd293e; AA408168	D18Ertd293e; AA408168
Mus musculus	RefSeq	ILMN_245162	ILMN_245162	DSG2	NM_007883.1	NM_007883.1		13511	22779878	NM_007883.1	Dsg2	NP_031909.1	ILMN_2955047	002570402	S	3562	CCTAAAGAGAAGCCAGCCGCAGTCGGATCTGGACCTTAACTAGCATCCAC	18	+	20760851-20760900	18qA2	Mus musculus desmoglein 2 (Dsg2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D18Ertd293e; AA408168	D18Ertd293e; AA408168
Mus musculus	RefSeq	ILMN_184970	ILMN_245162	DSG2	NM_007883.1	NM_007883.1		13511	22779878	NM_007883.1	Dsg2	NP_031909.1	ILMN_1215475	001740082	S	2269	GCGTAGGAGGTGCGATGCTCAAGGAAGGCATGATGAAAGGCAGCAGCTCA	18	+	20756914-20756963	18qA2	Mus musculus desmoglein 2 (Dsg2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D18Ertd293e; AA408168	D18Ertd293e; AA408168
Mus musculus	RefSeq	ILMN_220126	ILMN_220126	MRPS18A	NM_026768.3	NM_026768.3		68565	146141094	NM_026768.3	Mrps18a	NP_081044.1	ILMN_2717916	001090121	S	652	CACTTGCTCCTCCCACCAGAACCATTATCCTCCACAACAGCACAGAGAAC				17qC	Mus musculus mitochondrial ribosomal protein S18A (Mrps18a), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	1110004O20Rik; C79712; MGC66832	1110004O20Rik; C79712; MGC66832
Mus musculus	MEEBO	ILMN_185002	ILMN_185002	2310014D11RIK	scl5999.1.1_59						2310014D11Rik		ILMN_2423372	002060671	S	1	CATTGGATGCAGTAGGGGGGTCCGTGCAAGTGCTAACATATCTCCAGGAT										
Mus musculus	RefSeq	ILMN_196950	ILMN_196950	LOC217602	XM_126988.2	XM_126988.2			38050396	XM_126988.2	LOC217602		ILMN_2526362	001820136	S	2879	ATCTCAGAGCACAAGTCCGTGGCAAAATGGGACTGATAGCGGAAGCTATG										
Mus musculus	RefSeq	ILMN_216074	ILMN_229303	OLFR716	NM_146604.1	NM_146604.1		258597	22129444	NM_146604.1	Olfr716	NP_666815.1	ILMN_1222834	002680600	S	763	GCAATATTTAACTATATGCAGCCAAACACCAAAACTAGGAAGAAACAGGA	7	+	114291594-114291643	7qE3	Mus musculus olfactory receptor 716 (Olfr716), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR260-2	MOR260-2
Mus musculus	MEEBO	ILMN_213919	ILMN_213919	NFKB2	scl52956.24.4_13	NM_019408.1			9506920	NM_019408.1	Nfkb2		ILMN_2642239	002070014	S	3017	CTGTCTAATCGAAATCTTATTTAAACCTCAAGCCCACATCTCGGTGGGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized precursor cell acquires the specialized features of a follicular dendritic cell [goid 2268] [evidence IMP]; The process by which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation [goid 2467] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196386	ILMN_227736	1700037C18RIK	NM_028484.2	NM_028484.2		73261	145864484	NM_028484.2	1700037C18Rik	NP_082760.2	ILMN_1250924	001260441	S	811	CAGTGTTACTGAGGAAGGGTTCGTCCCAGCGGCAGTCCTCCCCATTGAGA				16qA1	Mus musculus RIKEN cDNA 1700037C18 gene (1700037C18Rik), mRNA.				2810022L20Rik	2810022L20Rik
Mus musculus	Riken	ILMN_204954	ILMN_204954	D330028P16RIK	ri|D330028P16|PX00192M13|AK052327|2670					AK052327	D330028P16Rik		ILMN_2568879	003450209	S	2219	GGAAACTGCTGGCTGTGGGTCTTCAAGACTCAGTACCACTTTTTGGGGAT										
Mus musculus	MEEBO	ILMN_196053	ILMN_196053	D630045J12RIK	scl0330286.2_101				51711907	XM_485743	D630045J12Rik		ILMN_2602177	002370543	S	4375	GGACACTTCCTTAGACTGGTTTTCAGTCTTTTTAGACAAGTGAGATTGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_184657	ILMN_230545	OPRM1	NM_001039652.1	NM_001039652.1		18390	89001113	NM_001039652.1	Oprm1	NP_001034741.1	ILMN_2420443	007510372	S	2138	GGCAGTCCCTCACAACTTGCCATTGGGAGTATCTGCATGAAAATATTTGG	10	-	3308785-3308834	10qA1	Mus musculus opioid receptor, mu 1 (Oprm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an opioid, any narcotic derived from or resembling opium, to initiate a change in cell activity [goid 4985] [evidence IEA];  [goid 4988] [evidence IDA]	MOR-1O; mor; muOR; MOR-1; Oprm	MOR-1O; mor; muOR; MOR-1; Oprm
Mus musculus	RefSeq	ILMN_185084	ILMN_227812	C030046E11RIK	NM_001081319.1	NM_001081319.1		226089	124486766	NM_001081319.1	C030046E11Rik	NP_001074788.1	ILMN_2424027	006620605	S	5318	GTGTAAGGTTTTACGCTGGATTCTGCATGACTATACTCACTCTTGGAATA	19	+	29679447-29679496	19qC1	Mus musculus RIKEN cDNA C030046E11 gene (C030046E11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C130057E09Rik; MGC159151	C130057E09Rik; MGC159151
Mus musculus	RefSeq	ILMN_197823	ILMN_197823	LOC242610	XM_143984.3	XM_143984.3			28545664	XM_143984.3	LOC242610		ILMN_2773575	006280722	S	8105	TAAATCTACTTCATTAATGGTAAACACTTGACTTTGAATTTACTTTATGG										
Mus musculus	Riken	ILMN_202647	ILMN_202647	H13	ri|5031424B04|PX00037G24|AK019877|2772					AK019877	H13		ILMN_1251954	005260255	S	2235	AAAAGAGAGAGAACAGGGAAGGCACCGGCAAGCTGAGTGTGTTAGCTCAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]		
Mus musculus	Riken	ILMN_204283	ILMN_204283	9630013D22RIK	ri|9630013D22|PX00115M23|AK035878|1552					AK035878	9630013D22Rik		ILMN_1236805	001260348	S	1341	CCTCTCCTTATGTGCTAGATAGGTGGCAGGGCTGGGGTGGGAGCATCAAG										
Mus musculus	Riken	ILMN_201845	ILMN_201845	5730525O22RIK	ri|5730525O22|PX00006I01|AK017789|2411					AK017789	5730525O22Rik		ILMN_2545037	001230040	S	2178	GATGCCTGATTCACAGAGCGACAGTGACCATCAGGTGTGCTGTGCAGTCC										
Mus musculus	RefSeq	ILMN_214977	ILMN_214977	KCTD5	NM_027008.1	NM_027008.1		69259	30794419	NM_027008.1	Kctd5	NP_081284.1	ILMN_2831579	001500504	S	2064	GACCGACCTCCTCCTTTCCTAAGGTCTGTTGTATGTTGTTAAGGTGTGGC	17	-	24184982-24185031	17qA3.3	Mus musculus potassium channel tetramerisation domain containing 5 (Kctd5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	2610030N08Rik; mKIAA0176	2610030N08Rik; mKIAA0176
Mus musculus	RefSeq	ILMN_214977	ILMN_214977	KCTD5	NM_027008.1	NM_027008.1		69259	30794419	NM_027008.1	Kctd5	NP_081284.1	ILMN_1239815	006200196	S	1896	GCTTCTTGACCTTCCCAAGGGAGCTGTGCAAACTGACCACTATGGCTGCC	17	-	24185150-24185199	17qA3.3	Mus musculus potassium channel tetramerisation domain containing 5 (Kctd5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	2610030N08Rik; mKIAA0176	2610030N08Rik; mKIAA0176
Mus musculus	RefSeq	ILMN_220412	ILMN_220412	AU040320	NM_133886.2	NM_133886.2		100317	78482606	NM_133886.2	AU040320	NP_598647.1	ILMN_1237034	002370041	S	4151	CGAGTGTATGTGCCCATTCCTCATAGGTCTCTTGGCTGCTCTCAAGGTTA	4	+	126531347-126531396	4qD2.2	Mus musculus expressed sequence AU040320 (AU040320), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A730047D20Rik	A730047D20Rik
Mus musculus	RefSeq	ILMN_231789	ILMN_231789	EFCAB4B	NM_001033464.1	NM_001033464.1		381812	85701988	NM_001033464.1	Efcab4b	NP_001028636.1	ILMN_3108021	002070561	A	749	GCTCAGCTCCAAGAAGCCCATGAGCAGAAGAACGAACTGGAATGTGCCCT	6	+	127577097-127577146	6qF3	Mus musculus EF-hand calcium binding domain 4B (Efcab4b), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Gm1073	Gm1073
Mus musculus	RefSeq	ILMN_231789	ILMN_231789	EFCAB4B	NM_001033464.1	NM_001033464.1		381812	85701988	NM_001033464.1	Efcab4b	NP_001028636.1	ILMN_3034320	006480370	I	942	TGAGCGCCAAGGAGCAGGAGCTGGAGCGACTCAATCAGAAGCAGAGGAAG	6	+	127595405-127595454	6qF3	Mus musculus EF-hand calcium binding domain 4B (Efcab4b), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Gm1073	Gm1073
Mus musculus	Riken	ILMN_203556	ILMN_203556	9330160L15RIK	ri|9330160L15|PX00106F09|AK034161|3761					AK034161	9330160L15Rik		ILMN_1243957	005960593	S	3432	CAACAGAGGTTTGTGGAAGCTAAGAGTAGGGTGGGATGGAGATGCATGGC										
Mus musculus	MEEBO	ILMN_194691	ILMN_194691	1810058I24RIK	scl30209.3_96						1810058I24Rik		ILMN_2508719	007330619	S	17	CCCCTAAGAGAAGTGTGGTGCAAATGTTGGTAAAGTGAGTCTCTCTGGGA										
Mus musculus	RefSeq	ILMN_218373	ILMN_218373	MYL1	NM_021285.2	NM_021285.2		17901	141802182	NM_021285.2	Myl1	NP_067260.1	ILMN_2694907	005220224	S	117	TTTTAATCAAAATGGCACCAAAGAAAGACGTGAAGAAGCCCGCTGCTGCG	1	-	66991440-66991479:66991480-66991489	1qC3	Mus musculus myosin, light polypeptide 1 (Myl1), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Mylf; AI325107; MLC1f; MLC3f	Mylf; AI325107; MLC1f; MLC3f
Mus musculus	RefSeq	ILMN_217400	ILMN_217400	RASSF7	NM_025886.3	NM_025886.3		66985	118403309	NM_025886.3	Rassf7	NP_080162.3	ILMN_2682778	001240754	S	1074	ATAGAGGAGAACTCCAGGGAGTCCCCCAGAGCCACATCCTAGTGTCCAGC	7	+	148404005-148404054	7qF5	Mus musculus Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 (Rassf7), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		2400009B11Rik; AW210608	2400009B11Rik; AW210608
Mus musculus	RefSeq	ILMN_217400	ILMN_217400	RASSF7	NM_025886.3	NM_025886.3		66985	118403309	NM_025886.3	Rassf7	NP_080162.3	ILMN_2778094	006040747	S	1253	ACAGGACTCTTTCCCTAAAGCTAAGCTGTCCTGCGGTTTCTGCTTCAGGG	7	+	148404285-148404334	7qF5	Mus musculus Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 (Rassf7), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		2400009B11Rik; AW210608	2400009B11Rik; AW210608
Mus musculus	RefSeq	ILMN_221776	ILMN_318424	LOC100048046	XM_001479690.1	XM_001479690.1		100048046	149254452	XM_001479690.1	LOC100048046	XP_001479740.1	ILMN_2740176	006180288	S	736	CTCGTATCCAGGCCATGAAACCCATGACAAAGGAGGAGTGGGATGCCCGA					PREDICTED: Mus musculus similar to SRp25 nuclear protein, transcript variant 1 (LOC100048046), mRNA.					
Mus musculus	RefSeq	ILMN_221776	ILMN_318424	LOC100048046	XM_001479690.1	XM_001479690.1		100048046	149254452	XM_001479690.1	LOC100048046	XP_001479740.1	ILMN_2760116	000770682	S	776	GGATGCCCGACAGAGCGTTATTCGAAAGGTGGTGGACCCAGAGACAGGAC					PREDICTED: Mus musculus similar to SRp25 nuclear protein, transcript variant 1 (LOC100048046), mRNA.					
Mus musculus	RefSeq	ILMN_209576	ILMN_227896	1700019O17RIK	XM_905829.2	XM_905829.2		71863	94364040	XM_905829.2	1700019O17Rik	XP_910922.1	ILMN_1234805	005270368	S	1658	CCCCAACCCTGCACTAGGTAACTGTCCCCTGCCTTTCAGTAAATAACCAC				1qD	PREDICTED: Mus musculus RIKEN cDNA 1700019O17 gene, transcript variant 3 (1700019O17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219669	ILMN_219669	LRRC1	NM_172528.2	NM_172528.2		214345	31982081	NM_172528.2	Lrrc1	NP_766116.2	ILMN_2868459	001240551	S	2388	GGATCCATGACTTACGTGTCACAGAAGAATGACTGTTGCCGAAGGAAGCT	9	-	77278943-77278992	9qD-qE1	Mus musculus leucine rich repeat containing 1 (Lrrc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA4018; A430093J20Rik; mKIAA4018; MGC90936; AU016091; D030059I21	KIAA4018; A430093J20Rik; mKIAA4018; MGC90936; AU016091; D030059I21
Mus musculus	RefSeq	ILMN_219669	ILMN_219669	LRRC1	NM_172528.2	NM_172528.2		214345	31982081	NM_172528.2	Lrrc1	NP_766116.2	ILMN_2744478	006980612	S	1594	CCCTCAGTCCATCCGCGTACCAGTAGCCTCCCGTCCTAATTCTGTTCAAT	9	-	77279737-77279786	9qD-qE1	Mus musculus leucine rich repeat containing 1 (Lrrc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA4018; A430093J20Rik; mKIAA4018; MGC90936; AU016091; D030059I21	KIAA4018; A430093J20Rik; mKIAA4018; MGC90936; AU016091; D030059I21
Mus musculus	RefSeq	ILMN_219669	ILMN_219669	LRRC1	NM_172528.2	NM_172528.2		214345	31982081	NM_172528.2	Lrrc1	NP_766116.2	ILMN_2868457	005810647	S	2305	CTGCTCCAGAGGCATGGGCCACCTGGGTAACAGCACACAGCAGAAAAGCA	9	-	77279026-77279075	9qD-qE1	Mus musculus leucine rich repeat containing 1 (Lrrc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA4018; A430093J20Rik; mKIAA4018; MGC90936; AU016091; D030059I21	KIAA4018; A430093J20Rik; mKIAA4018; MGC90936; AU016091; D030059I21
Mus musculus	RefSeq	ILMN_221470	ILMN_221470	CDH6	NM_007666.3	NM_007666.3		12563	110665731	NM_007666.3	Cdh6	NP_031692.2	ILMN_2736042	000520544	S	2332	CATTGTGCCTGAAGCTCTTTTTCTACCCCGGCGGACTCCAACAGCTCGTG	15	-	12964205-12964254	15qA1	Mus musculus cadherin 6 (Cdh6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC129360; K-cadherin; cadherin-6; MGC129338; cad6	MGC129360; K-cadherin; cadherin-6; MGC129338; cad6
Mus musculus	RefSeq	ILMN_261731	ILMN_261731	9130008F23RIK	NM_027834.1	NM_027834.1		71583	58037250	NM_027834.1	9130008F23Rik	NP_082110.1	ILMN_2867735	000840270	S	1622	ATCTAGCATGGGGTTGTGGGGGTGGGACGGGAGCGGTGGGGTCAGTCATT	17	-	40339447-40339496	17qB2	Mus musculus RIKEN cDNA 9130008F23 gene (9130008F23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_247269	ILMN_247269	RNPEP	NM_145417.1	NM_145417.1		215615	21703831	NM_145417.1	Rnpep	NP_663392.1	ILMN_2780316	001740711	S	1988	CAAGGACAGTTAGAGGCTTCGCCTGGGTGGTCCCTGCCTCAGAAAGGCTT	1	-	137079323-137079372	1qE4	Mus musculus arginyl aminopeptidase (aminopeptidase B) (Rnpep), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	MGC29229	MGC29229
Mus musculus	RefSeq	ILMN_210949	ILMN_312640	LOC100045272	XR_031489.1	XR_031489.1		100045272	149270902	XR_031489.1	LOC100045272		ILMN_2610928	000780292	S	2064	CTAGAATCATGGGCTTGTTGTGGATATAAAACAAGGACATTGCGGACCAT					PREDICTED: Mus musculus similar to chloride channel 5 (LOC100045272), misc RNA.					
Mus musculus	Riken	ILMN_201727	ILMN_201727	MTAP7	ri|2010001M21|ZX00043F17|AK008018|795					AK008018	Mtap7		ILMN_1231159	006220348	S	701	GACGGGCTGTAAACCAGCTGATGCCCTGACCAGTCTCTGAGGATTGAACG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis [goid 33327] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IPI]; The process whose specific outcome is the progression of a Sertoli cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a Sertoli cell fate [goid 60009] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nucleus [goid 6997] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_233187	ILMN_233187	ZFP182	NM_001013387.1	NM_001013387.1		319535	67972405	NM_001013387.1	Zfp182	NP_001013405.1	ILMN_2815571	001710255	S	1529	CAGAAATCCTACCTCATGCTACATCAACGAGGCCACACTGGCGAGAAGCC	X	-	20607616-20607665	XqA1.3	Mus musculus zinc finger protein 182 (Zfp182), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	6330583I20Rik	6330583I20Rik
Mus musculus	RefSeq	ILMN_222110	ILMN_328909	SLC35A4	NM_001083317.1	NM_001083317.1		67843	134031967	NM_001083317.1	Slc35a4	NP_001076786.1	ILMN_2744758	000360204	S	2505	CCCCTGTGCTAACTCGAGAGCCCTGTTGAAGCCTTTCCCTCTGAAGCACT	18	+	36843286-36843335	18qB2	Mus musculus solute carrier family 35, member A4 (Slc35a4), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	MGC143688; 2610030J16Rik; MGC143687	MGC143688; 2610030J16Rik; MGC143687
Mus musculus	RefSeq	ILMN_198524	ILMN_198524	LOC235841	XM_142415.3	XM_142415.3			38085982	XM_142415.3	LOC235841		ILMN_1231554	000430433	S	238	GTTGTCATGGGCCCAGGTTTACCAACTCTGAGAAGACTCTCAGGGCAGCC										
Mus musculus	RefSeq	ILMN_201304	ILMN_201304	LOC382401	XM_356486.1	XM_356486.1			38090733	XM_356486.1	LOC382401		ILMN_2541817	004810022	S	454	GGAGGACACAGGACAACAGAAAGAGTCAACAATGGAGGACACAGGACAAC										
Mus musculus	RefSeq	ILMN_212678	ILMN_212678	RFWD2	NM_011931.3	NM_011931.3		26374	118129976	NM_011931.3	Rfwd2	NP_036061.1	ILMN_2707245	003610603	S	2615	GGAACACCTTTTTGTCAGATGGGGTGAGAGTCTTTTGAAGAAGTTGCACT	1	+	161275270-161275319	1qH1	Mus musculus ring finger and WD repeat domain 2 (Rfwd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C80879; Cop1; AI316802	C80879; Cop1; AI316802
Mus musculus	RefSeq	ILMN_212678	ILMN_212678	RFWD2	NM_011931.3	NM_011931.3		26374	118129976	NM_011931.3	Rfwd2	NP_036061.1	ILMN_2629120	006760598	S	1019	GGCCTCTACTCTCCTGTCAGTGAAGATAGCACAGTGCCTCAATTTGAAGC	1	+	161198249-161198298	1qH1	Mus musculus ring finger and WD repeat domain 2 (Rfwd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C80879; Cop1; AI316802	C80879; Cop1; AI316802
Mus musculus	RefSeq	ILMN_188435	ILMN_212678	RFWD2	NM_011931.3	NM_011931.3		26374	118129976	NM_011931.3	Rfwd2	NP_036061.1	ILMN_1233127	001050220	S	4976	CAGGGGTTTTGTAGGGTTTCTTACACAACTTGTCTTTATTCCCATTTGTC	1	+	161277631-161277680	1qH1	Mus musculus ring finger and WD repeat domain 2 (Rfwd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C80879; Cop1; AI316802	C80879; Cop1; AI316802
Mus musculus	RefSeq	ILMN_211111	ILMN_225253	SNRPD2	NM_026943.1	NM_026943.1		107686	58037144	NM_026943.1	Snrpd2	NP_081219.1	ILMN_2612635	001030463	S	132	CAGGTCCCCTCTCAGTGCTCACGCAGTCGGTCAAGAACAACACGCAAGTG	7	+	19736641-19736690	7qA3	Mus musculus small nuclear ribonucleoprotein D2 (Snrpd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC62953; SMD2; 1810009A06Rik	MGC62953; SMD2; 1810009A06Rik
Mus musculus	Riken	ILMN_202454	ILMN_202454	4930572L20RIK	ri|4930572L20|PX00036D09|AK016282|1442					AK016282	4930572L20Rik		ILMN_1234310	000070528	S	1280	AGATGTGGCAAGAGGAAGGGGGTGAGAGGGAGCAGGAGAGAAACCAGAGG										
Mus musculus	RefSeq	ILMN_255109	ILMN_255109	TMEM141	NM_001040130.1	NM_001040130.1		51875	92110402	NM_001040130.1	Tmem141	NP_001035219.1	ILMN_2923707	004280433	S	695	GGGGTCCTGCCTGAAAAACCTGTGAAGACTACTGCTGCACCAAATCCAGG				2qA3	Mus musculus transmembrane protein 141 (Tmem141), mRNA. XM_979169	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110065P14Rik; D2Ertd217e; AI663999	1110065P14Rik; D2Ertd217e; AI663999
Mus musculus	RefSeq	ILMN_205268	ILMN_211818	ACOX1	NM_015729.2	NM_015729.2		11430	66793428	NM_015729.2	Acox1	NP_056544.2	ILMN_1247196	006350048	S	666	CCCACCTTGCTTCACCAGGCCACCGAAGAGCAGCAGGAGCGTTTCTTCAT	11	-	116044833-116044882	11qE2	Mus musculus acyl-Coenzyme A oxidase 1, palmitoyl (Acox1), mRNA.	The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + H2O2 [goid 3997] [evidence TAS]	D130055E20Rik; AI042784; AOX	D130055E20Rik; AI042784; AOX
Mus musculus	RefSeq	ILMN_211818	ILMN_211818	ACOX1	NM_015729.2	NM_015729.2		11430	66793428	NM_015729.2	Acox1	NP_056544.2	ILMN_2771368	005090039	S	3685	GGCTAGTTGGAACTCTTTGTTCTTAAAAGCACAGTAGAGAGATCATTGTG	11	-	116033454-116033503	11qE2	Mus musculus acyl-Coenzyme A oxidase 1, palmitoyl (Acox1), mRNA.	The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + H2O2 [goid 3997] [evidence TAS]	D130055E20Rik; AI042784; AOX	D130055E20Rik; AI042784; AOX
Mus musculus	MEEBO	ILMN_184804	ILMN_184804	A930004J17RIK	scl24878.1.1_66						A930004J17Rik		ILMN_1212958	002340576	S	1	GGCCACCCCACTGTTACTGAGCCATGGTACTGTTATAACATCTTTGCTGC										
Mus musculus	RefSeq	ILMN_246386	ILMN_246386	DPH3	NM_001047433.1	NM_001047433.1		105638	114145562	NM_001047433.1	Dph3	NP_001040898.1	ILMN_3134412	005050167	A	2449	CGAACAGACCGGGGATGAGTGCCTGGTAGGAGCGGGTGTGACTTTGTATT	14	-	32894190-32894239	14qB	Mus musculus DPH3 homolog (KTI11, S. cerevisiae) (Dph3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DELGIP1; 2610018L09Rik; DelgipP1; AL022916; 5730511P15Rik; Desr1; AV083614; Zcsl2	DELGIP1; 2610018L09Rik; DelgipP1; AL022916; 5730511P15Rik; Desr1; AV083614; Zcsl2
Mus musculus	RefSeq	ILMN_219129	ILMN_246386	DPH3	NM_001047433.1	NM_001047433.1		105638	114145562	NM_001047433.1	Dph3	NP_001040898.1	ILMN_2717172	004200703	S	2872	GTACTGCGTGGATCAGTTCATTAGAACGACTTGCATTGCCAAGCTAATAA	14	-	32893767-32893816	14qB	Mus musculus DPH3 homolog (KTI11, S. cerevisiae) (Dph3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DELGIP1; 2610018L09Rik; DelgipP1; AL022916; 5730511P15Rik; Desr1; AV083614; Zcsl2	DELGIP1; 2610018L09Rik; DelgipP1; AL022916; 5730511P15Rik; Desr1; AV083614; Zcsl2
Mus musculus	RefSeq	ILMN_252831	ILMN_252831	EG432987	NM_001004170.1	NM_001004170.1		432987	51921342	NM_001004170.1	EG432987	NP_001004170.1	ILMN_3161002	000730370	S	2788	GTTCTTACTCAAGAAATGCACACGTCCCTTTGAGTTTCCAGCGGCCTGAG	15	-	101473573-101473622	15qF2	Mus musculus predicted gene, EG432987 (EG432987), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			MGC54654	MGC54654
Mus musculus	Riken	ILMN_206481	ILMN_206481	D430021F02RIK	ri|D430021F02|PX00194C19|AK084981|2241					AK084981	D430021F02Rik		ILMN_1220981	000110131	S	1892	CCCACCACAGTGAGCTCTGGATACCCCAAAACACCTGACTATCAAGACGC										
Mus musculus	RefSeq	ILMN_198802	ILMN_198802	LOC233466	XM_145917.3	XM_145917.3			38087731	XM_145917.3	LOC233466		ILMN_1239602	007200070	S	1889	GGATCACCTTCCTCCCTGTCTACCACAGCACTAAGGAACTGCAAGGAAAT										
Mus musculus	RefSeq	ILMN_198314	ILMN_228880	LOC671184	XM_992301.1	XM_992301.1		671184	94405321	XM_992301.1	LOC671184	XP_997395.1	ILMN_1225194	005310056	S	982	CAGGTCTTGTTACATAGCAGAGTATGGCCTTGAACTGCGTGAGCCTCCTC					PREDICTED: Mus musculus similar to CG16865-PA, transcript variant 3 (LOC671184), mRNA.					
Mus musculus	RefSeq	ILMN_192308	ILMN_192308	WISP2	NM_016873.1	NM_016873.1		22403	8394540	NM_016873.1	Wisp2	NP_058569.1	ILMN_2486906	004280477	S	9	TGTCCCAAAGATTATGGGTGACCTTGTAAGTGTGCCTTTCCTGATCTGAG	2	+	163637872-163637874:163646634-163646680	2qH3	Mus musculus WNT1 inducible signaling pathway protein 2 (Wisp2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Crgr4; rCop1	Crgr4; rCop1
Mus musculus	RefSeq	ILMN_223072	ILMN_223072	EXDL1	NM_172857.2	NM_172857.2		241624	142351361	NM_172857.2	Exdl1	NP_766445.1	ILMN_3160260	006940408	S	2625	GGAGGGGCCTAAGAAGAGCAGTAATGGGTGAGGTCAAACATGCCATTCCA	2	-	119345608-119345657	2qE5	Mus musculus exonuclease 3'-5' domain-like 1 (Exdl1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4932702D22Rik	4932702D22Rik
Mus musculus	RefSeq	ILMN_254689	ILMN_254689	CRYGN	NM_153076.1	NM_153076.1		214301	23346484	NM_153076.1	Crygn	NP_694716.1	ILMN_3102770	002140689	A	381	CTGTGTCAACGCCATCAAGGTGTATGGGGACGGAGCGTGGGTCCTCTATG	5	-	24256993-24257007:24259952-24259986	5qA3	Mus musculus crystallin, gamma N (Crygn), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_254689	ILMN_254689	CRYGN	NM_153076.1	NM_153076.1		214301	23346484	NM_153076.1	Crygn	NP_694716.1	ILMN_3029509	000020131	I	209	CTGAATTCTTCCGCTGGAATGGCCACAACGACCACATGGGCTCCTGTCGG	5	-	24261866-24261915	5qA3	Mus musculus crystallin, gamma N (Crygn), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_192041	ILMN_192041	2310011E23RIK	scl0069610.1_138						2310011E23Rik		ILMN_1225951	001780477	S	6	CATGTGGGATCCATCACACCTGTCTTTTCTTGCCTTTTCACATGTGTATT										
Mus musculus	MEEBO	ILMN_195796	ILMN_195796	ACVR1B	scl47487.1.1186_63				6680629	NM_007395	Acvr1b		ILMN_2740103	006370327	S	1918	GAGAGGAACCGGAAGTTTCTCCCTCCTTCCCGTAGCAGTCCTGAGCCACA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence ISA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence TAS]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [evidence IPI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194661	ILMN_239608	PCYT1A	NM_009981.3	NM_009981.3		13026	142386747	NM_009981.3	Pcyt1a	NP_034111.1	ILMN_2688728	000150475	S	1597	CCAGATCCTTCAAACAGGGAGCCATGCTAATGGCCAATTTGGGGACTATC	16	+	32472036-32472085	16qB3	Mus musculus phosphate cytidylyltransferase 1, choline, alpha isoform (Pcyt1a), mRNA.	Cytoplasmic bead-like structures of animal cells, visible by electron microscope. Each granule is a functional unit with the biosynthesis and catabolism of glycogen being catalyzed by enzymes bound to the granule surface [goid 42587] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (non-living) stimulus [goid 9628] [evidence IDA]; The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IDA]; The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IMP]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: CTP + choline phosphate = diphosphate + CDP-choline [goid 4105] [evidence IEA]	CTalpha; Cttalpha; Ctpct	CTalpha; Cttalpha; Ctpct
Mus musculus	RefSeq	ILMN_216783	ILMN_253683	H2-Q6	NM_207648.1	NM_207648.1		110557	46559399	NM_207648.1	H2-Q6	NP_997531.1	ILMN_2675337	004040095	S	828	GAATTACACATGCCATGTGAACCATGAGGGGCTGCCTGAGCCTCTCACCC	17	+	35562206-35562255	17qB1	Mus musculus histocompatibility 2, Q region locus 6 (H2-Q6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			H-2Q6; Qa-6; Qa6	H-2Q6; Qa-6; Qa6
Mus musculus	RefSeq	ILMN_211235	ILMN_211235	PRG2	NM_008920.4	NM_008920.4		19074	145966809	NM_008920.4	Prg2	NP_032946.1	ILMN_2613878	004280180	S	697	GAGACGTCCCTTCATCTGTTCGTATTGAGCTGGTTCCAGCTGGGAGTTCA				2qD	Mus musculus proteoglycan 2, bone marrow (Prg2), mRNA.		Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	mMBP; MGC130327; MBP; mMBP-1	mMBP; MGC130327; MBP; mMBP-1
Mus musculus	Riken	ILMN_204566	ILMN_204566	FTO	ri|B930005B09|PX00162P21|AK046935|1770					AK046935	Fto		ILMN_2565964	004640070	S	1627	CCACTAAATAGATGGCTGAGATGAGAGGCCAGGCTGCAGAGCACACCTGA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [pmid 10501967] [evidence IEP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [pmid 10501967] [evidence IEP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212668	ILMN_212668	PAQR3	NM_198422.2	NM_198422.2		231474	118130829	NM_198422.2	Paqr3	NP_940814.1	ILMN_2629025	004210040	S	776	GCTCTGTTTCGGGATATGGAGTGATCCCTACTCTTCACTGGGTTTGGCTC	5	-	97528594-97528643	5qE3	Mus musculus progestin and adipoQ receptor family member III (Paqr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	6330415A20Rik; AY424292	6330415A20Rik; AY424292
Mus musculus	RefSeq	ILMN_209482	ILMN_246639	HYAL5	NM_028957.2	NM_028957.2		74468	142368352	NM_028957.2	Hyal5	NP_083233.1	ILMN_2596220	000070593	S	1700	CCCTTGTAATTTCAGACAAAAGCGAACTACCCAAGGACTGGAATCGCCCT	6	+	24841588-24841637	6qA3.1	Mus musculus hyaluronoglucosaminidase 5 (Hyal5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IDA]	Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [evidence IDA]	4933439A12Rik	4933439A12Rik
Mus musculus	RefSeq	ILMN_184178	ILMN_184178	TTLL1	NM_178869.2	NM_178869.2		319953	31343471	NM_178869.2	Ttll1	NP_849200.1	ILMN_2966826	007100180	S	1924	TTTGAGATAGGTACCTCTGGATGGCCTGGAACTTGCCATGTAGACCAGGC	15	-	83311605-83311654	15qE1	Mus musculus tubulin tyrosine ligase-like 1 (Ttll1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	AV014541; 6330444E16Rik	AV014541; 6330444E16Rik
Mus musculus	MEEBO	ILMN_190446	ILMN_190446	ZFP128	scl33080.4_549				30466264	NM_153802	Zfp128		ILMN_1220117	004250504	S	20	GTATTAACATGGAGAAGCCCTGATACAAACTCAACCCAGAAGGTTGAGTA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_190446	ILMN_190446	ZFP128	scl33080.4_549				30466264	NM_153802	Zfp128		ILMN_2470238	002570408	S	2	CAGTGCTTCTGGGCCAGAATTTGAATGAAAGCAGTGACTGGGGTTATTGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_186342	ILMN_186342	B230220E17RIK	scl48049.3_3				51769071	XM_484451	B230220E17Rik		ILMN_2434722	006100400	S	7	ACAACATAGCATCATGGAATACAAATTGTTTGCTATAAACTTTCAATCCA										
Mus musculus	RefSeq	ILMN_219788	ILMN_219788	ABCA7	NM_013850.1	NM_013850.1		27403	15451839	NM_013850.1	Abca7	NP_038878.1	ILMN_2896639	002480170	S	6135	TGAGCCGGCGATAGCCTTCATCAGGATCACATTCCCTGGGGCTGAACTCC	10	+	79477740-79477789	10qC1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 7 (Abca7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [evidence IDA]	ABCX; Abc51	ABCX; Abc51
Mus musculus	RefSeq	ILMN_219788	ILMN_219788	ABCA7	NM_013850.1	NM_013850.1		27403	15451839	NM_013850.1	Abca7	NP_038878.1	ILMN_2716039	000620131	S	426	GGAGAGTGACCAGCCGACCAGTCAAGGGTCAGTGACTAAGCTTCTGGAGA	10	+	79461206-79461255	10qC1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 7 (Abca7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [evidence IDA]	ABCX; Abc51	ABCX; Abc51
Mus musculus	RefSeq	ILMN_219788	ILMN_219788	ABCA7	NM_013850.1	NM_013850.1		27403	15451839	NM_013850.1	Abca7	NP_038878.1	ILMN_1221703	002000692	S	6400	GTTTCCAAACCTGGCCGGCAGCATCCCAAACGTGTCAGCCGATTCCTGGA	10	+	79478123-79478172	10qC1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 7 (Abca7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [evidence IDA]	ABCX; Abc51	ABCX; Abc51
Mus musculus	RefSeq	ILMN_209785	ILMN_209785	SIGLECE	NM_031181.1	NM_031181.1		83382	13626035	NM_031181.1	Siglece	NP_112458.1	ILMN_2969577	001070022	S	1862	TCCAAGACAGGGTTTCTCTGTGTAGCCTTGGCTGCCTAGAACTTGCTCTG				7qB4	Mus musculus sialic acid binding Ig-like lectin E (Siglece), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA];  [goid 5057] [evidence IPI]; Interacting selectively with any monosaccharide. Monosaccharides are the simplest carbohydrates; they are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H[CHOH]nC(=O)[CHOH]mH with three or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides [goid 48029] [evidence IDA]	Siglec9; mSiglec-E; Siglec5; Cd170; Siglecl1	Siglec9; mSiglec-E; Siglec5; Cd170; Siglecl1
Mus musculus	RefSeq	ILMN_209144	ILMN_209144	SCG5	NM_009162.3	NM_009162.3		20394	117938283	NM_009162.3	Scg5	NP_033188.3	ILMN_2592953	005310379	S	847	TGCCTCCATACCAATGCCTGTGCTTTCTGCTACATTAGAATAAAAGCTCC	2	-	113616800-113616849	2qE4	Mus musculus secretogranin V (Scg5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46883] [evidence IDA]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]	7B2; AI325031; Sgne-1; Sgne1	7B2; AI325031; Sgne-1; Sgne1
Mus musculus	Riken	ILMN_206189	ILMN_206189	A530058G07RIK	ri|A530058G07|PX00142A14|AK080080|1296					AK080080	A530058G07Rik		ILMN_2578245	006250068	S	967	TAAGAGAACCCTCATTTGGGGGGTGGGGGTGGGTCTGGCTCAGGTGGCAC										
Mus musculus	MEEBO	ILMN_184847	ILMN_184847	4933437C06RIK	scl7526.2.1_136						4933437C06Rik		ILMN_2422077	005420446	S	11	CCCTTAGAGACCAAGATTCCTAAATAGTCATAGAAGGAGTCAGTTGCAAG										
Mus musculus	RefSeq	ILMN_246529	ILMN_246529	PILRA	NM_153510.1	NM_153510.1		231805	23943819	NM_153510.1	Pilra	NP_705730.1	ILMN_2910768	003520039	S	718	AGAAGAAGGCAAGGCCAGAAGACTAAAGCTGAAATCCCAGCCAGGGAGCC	5	-	138053830-138053837:138056642-138056672:138060916-138060926	5qG2	Mus musculus paired immunoglobin-like type 2 receptor alpha (Pilra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AV021745; FDF03	AV021745; FDF03
Mus musculus	RefSeq	ILMN_211842	ILMN_211842	CAPN2	NM_009794.2	NM_009794.2		12334	142345046	NM_009794.2	Capn2	NP_033924.1	ILMN_2620030	007040477	S	2112	CCCGGTTTGCAGACGACGAGCTAATCATCGACTTTGACAATTTTGTGCGG	1	-	184400838-184400887	1qH5	Mus musculus calpain 2 (Capn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	m-calpin; m-calpain; AI326419; Capa2; Capa-2	m-calpin; m-calpain; AI326419; Capa2; Capa-2
Mus musculus	RefSeq	ILMN_211842	ILMN_211842	CAPN2	NM_009794.2	NM_009794.2		12334	142345046	NM_009794.2	Capn2	NP_033924.1	ILMN_2683586	004480167	S	2017	GGACAGGTCTGGAACCATGAATTCCTACGAGATGCGGAAAGCACTGGAAG	1	-	184402658-184402707	1qH5	Mus musculus calpain 2 (Capn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	m-calpin; m-calpain; AI326419; Capa2; Capa-2	m-calpin; m-calpain; AI326419; Capa2; Capa-2
Mus musculus	RefSeq	ILMN_198224	ILMN_198224	LOC225070	XM_128790.2	XM_128790.2			38082975	XM_128790.2	LOC225070		ILMN_1248030	001780333	S	156	CCCCAAACCTCACCAGGAGAAAATGCAGTGCAAGAAAGGGCGGTGTGGCG										
Mus musculus	Riken	ILMN_207098	ILMN_207098	E330019N15RIK	ri|E330019N15|PX00211M04|AK087777|1733					AK087777	E330019N15Rik		ILMN_1218951	004280113	S	1352	GTGGTGTGGGTGCGTGGACTCTTACGGTACCTGGCGAAGGTATGAAGTGA										
Mus musculus	RefSeq	ILMN_207561	ILMN_207561	ACTB	NM_007393.1	NM_007393.1		11461	6671508	NM_007393.1	Actb	NP_031419.1	ILMN_2617433	002480577	S	14	TCCACCCGCGAGCACAGCTTCTTTGCAGCTCCTTCGTTGCCGGTCCACAC	5	-	143171801-143171850	5qG2	Mus musculus actin, beta, cytoplasmic (Actb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Actx; E430023M04Rik; beta-actin	Actx; E430023M04Rik; beta-actin
Mus musculus	RefSeq	ILMN_207561	ILMN_207561	ACTB	NM_007393.1	NM_007393.1		11461	6671508	NM_007393.1	Actb	NP_031419.1	ILMN_2846865	000780386	S	1412	GGTGAAGGCGACAGCAGTTGGTTGGAGCAAACATCCCCCAAAGTTCTACA	5	-	143168683-143168732	5qG2	Mus musculus actin, beta, cytoplasmic (Actb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Actx; E430023M04Rik; beta-actin	Actx; E430023M04Rik; beta-actin
Mus musculus	RefSeq	ILMN_210605	ILMN_210605	CLDN9	NM_020293.2	NM_020293.2		56863	61098101	NM_020293.2	Cldn9	NP_064689.2	ILMN_2607331	005700037	S	892	ATGCTAGGGGGAGGGCTCCTCTGCTGTACGTGTCCCCCGTCACACTTTGA	17	-	23820044-23820093	17qA3.3	Mus musculus claudin 9 (Cldn9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201036	ILMN_313776	LOC100039829	XM_001473382.1	XM_001473382.1		100039829	149272831	XM_001473382.1	LOC100039829	XP_001473432.1	ILMN_1217982	002100070	S	1149	TCATTCCAGAGACCCCTCTGGCTGAGGCGAGATCAGGTGATGAAAATGAC	Y|NT_161916.3	-	585875-585924		PREDICTED: Mus musculus similar to putative, transcript variant 1 (LOC100039829), mRNA.					
Mus musculus	RefSeq	ILMN_228023	ILMN_228023	PRICKLE2	NM_001081146.1	NM_001081146.1		243548	124487246	NM_001081146.1	Prickle2	NP_001074615.1	ILMN_3015864	006900307	I	2368	AGGGAGGACTATGACCAGTTCATGCGCCAACGCAGCTTCCAGGAGAGCCT	6	-	92326267-92326316	6qD1	Mus musculus prickle-like 2 (Drosophila) (Prickle2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The apical end of the lateral plasma membrane of epithelial cells [goid 16327] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IDA]	Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell [goid 45197] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	6720451F06Rik; 6230400G14Rik	6720451F06Rik; 6230400G14Rik
Mus musculus	RefSeq	ILMN_219097	ILMN_219097	HSPA4	NM_008300.3	NM_008300.3		15525	112293265	NM_008300.3	Hspa4	NP_032326.3	ILMN_2716838	000380204	S	2656	CAGTCCTATAATTTCAAAACCCAAACCCAAAGTGGAACCCCCAAAGGAGG	11	-	53075250-53075299	11qB1.3	Mus musculus heat shock protein 4 (Hspa4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hsp70RY; 70kDa; APG-2; mKIAA4025; KIAA4025; Hsp110; AI317151	Hsp70RY; 70kDa; APG-2; mKIAA4025; KIAA4025; Hsp110; AI317151
Mus musculus	RefSeq	ILMN_219097	ILMN_219097	HSPA4	NM_008300.3	NM_008300.3		15525	112293265	NM_008300.3	Hspa4	NP_032326.3	ILMN_2704237	004050630	S	2394	CTGAAGAAAGACCAAAATTATTTGAAGAACTAGGGAAGCAAATCCAACAG	11	-	53076414-53076463	11qB1.3	Mus musculus heat shock protein 4 (Hspa4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hsp70RY; 70kDa; APG-2; mKIAA4025; KIAA4025; Hsp110; AI317151	Hsp70RY; 70kDa; APG-2; mKIAA4025; KIAA4025; Hsp110; AI317151
Mus musculus	RefSeq	ILMN_217397	ILMN_217397	PDC	NM_024458.1	NM_024458.1		20028	13277351	NM_024458.1	Pdc	NP_077778.1	ILMN_1241917	004540014	S	125	GCCGCCAGCCAAAGCTTAGAAGAAGATTTTGAAGGACAGGCCACGCACAC	1	+	152175498-152175530:152177856-152177872	1qG1	Mus musculus phosducin (Pdc), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]		Rpr1; Rpr-1	Rpr1; Rpr-1
Mus musculus	RefSeq	ILMN_217397	ILMN_217397	PDC	NM_024458.1	NM_024458.1		20028	13277351	NM_024458.1	Pdc	NP_077778.1	ILMN_2795189	000160561	S	811	CCTAGAGCAGACCAACATGGAAGACGAGGACATTGAATAAGCCTTCACCA	1	+	152180612-152180632:152180633-152180661	1qG1	Mus musculus phosducin (Pdc), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]		Rpr1; Rpr-1	Rpr1; Rpr-1
Mus musculus	RefSeq	ILMN_217397	ILMN_217397	PDC	NM_024458.1	NM_024458.1		20028	13277351	NM_024458.1	Pdc	NP_077778.1	ILMN_2682754	001010358	S	120	AGAAGCCGCCAGCCAAAGCTTAGAAGAAGATTTTGAAGGACAGGCCACGC	1	+	152175493-152175530:152177856-152177867	1qG1	Mus musculus phosducin (Pdc), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]		Rpr1; Rpr-1	Rpr1; Rpr-1
Mus musculus	RefSeq	ILMN_188045	ILMN_188045	TNFRSF17	NM_011608.1	NM_011608.1		21935	6755822	NM_011608.1	Tnfrsf17	NP_035738.1	ILMN_2854497	002940482	S	455	CTAGGATCAGGGCTGGTGACGACAGGATCTTTCCCCGAAGCCTGGAGTAT	16	+	11319804-11319853	16qA1	Mus musculus tumor necrosis factor receptor superfamily, member 17 (Tnfrsf17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	BCMA; Tnfrsf13a; BCM; Tnfrsf13	BCMA; Tnfrsf13a; BCM; Tnfrsf13
Mus musculus	RefSeq	ILMN_221752	ILMN_221752	CYP1A2	NM_009993.2	NM_009993.2		13077	31982808	NM_009993.2	Cyp1a2	NP_034123.1	ILMN_2795106	005260367	S	1519	GTGGACCTGACACCCAACTATGGGTTGACCATGAAGCCCGGGACCTGTGA	9	-	57475397-57475446	9qB	Mus musculus cytochrome P450, family 1, subfamily a, polypeptide 2 (Cyp1a2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern [goid 18894] [evidence IMP]; The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IMP]; The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern [goid 18894] [evidence IMP]; The chemical reactions and pathways involving a drug, a substance used in the diagnosis, treatment or prevention of a disease; as used here antibiotic substances (see antibiotic metabolism) are considered to be drugs, even if not used in medical or veterinary practice [goid 17144] [evidence IMP]; The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 50665] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The chemical reactions and pathways involving any member of a large group of derivatives or analogs of porphyrin. Porphyrins consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6778] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 9404] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IDA]	CP12; P450-3	CP12; P450-3
Mus musculus	MEEBO	ILMN_187121	ILMN_187121	ABCG1	scl50881.16_363				6752939	NM_009593	Abcg1		ILMN_2441335	006840326	S	2	CCGGTCAGACGCACTGGTGTCTGTGTACTTCGGGAATGTTTATCTGTGAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol [goid 45542] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211012	ILMN_211012	SAMHD1	NM_018851.2	NM_018851.2		56045	46909601	NM_018851.2	Samhd1	NP_061339.2	ILMN_1221736	003190577	S	1779	CACAACTGCTGCCAGAGAAATTTGCAGAGCAGCTCATTCGGGTGTACTGT	2	-	156927540-156927589	2qH1	Mus musculus SAM domain and HD domain, 1 (Samhd1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Mg11; E330031J07Rik	Mg11; E330031J07Rik
Mus musculus	RefSeq	ILMN_211012	ILMN_211012	SAMHD1	NM_018851.2	NM_018851.2		56045	46909601	NM_018851.2	Samhd1	NP_061339.2	ILMN_1257505	006860278	S	1941	CACCTCTGAAATGGAATAATAAGACTTCATCTTGCCTCCAAGAAGTATCC	2	-	156925161-156925210	2qH1	Mus musculus SAM domain and HD domain, 1 (Samhd1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Mg11; E330031J07Rik	Mg11; E330031J07Rik
Mus musculus	MEEBO	ILMN_190415	ILMN_190415	TRAV14D-2_U04312_T_CELL_RECEPTOR_ALPHA_VARIABLE_14D-2_3	TRAV14D-2_U04312_T_cell_receptor_alpha_variable_14D-2_3						TRAV14D-2_U04312_T_cell_receptor_alpha_variable_14D-2_3		ILMN_1228518	002510056	S	9	CCTGACAGCATCATGTTTACTCCTAGGCCATCACCTAGCTGGGGTGAGTG										
Mus musculus	RefSeq	ILMN_194626	ILMN_242929	SAP130	NM_172965.2	NM_172965.2		269003	141803087	NM_172965.2	Sap130	NP_766553.1	ILMN_2680937	000290390	S	3737	CCACAGCACCCAGAGAACTGCCACATCTCACGCAAAAGGATCCAGCGATC	18	+	31882437-31882486	18qB1	Mus musculus Sin3A associated protein (Sap130), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		6720406D06; 2610304F09Rik	6720406D06; 2610304F09Rik
Mus musculus	MEEBO	ILMN_185315	ILMN_185315	SCL000231.1_58	scl000231.1_58	AK009720.1			12844688	AK009720.1	scl000231.1_58		ILMN_2426005	007000162	S	18	GCTAGGAGAACTGAGGCTTCAAACCTGAAGCTATCTAATGAGGAGGCTGA										
Mus musculus	RefSeq	ILMN_199114	ILMN_253943	OLFR772	NM_146266.1	NM_146266.1		257666	49170035	NM_146266.1	Olfr772	NP_666378.1	ILMN_1225795	004230064	S	552	CTCTTGTTCAGACACTTGGTTCATGGAGCAGACAGTTCTCATCTGTGCTG	10	-	128611474-128611523	10qD3	Mus musculus olfactory receptor 772 (Olfr772), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR114-3; GA_x5J8B7W1NLL-1408-2343	MOR114-3; GA_x5J8B7W1NLL-1408-2343
Mus musculus	RefSeq	ILMN_253943	ILMN_253943	OLFR772	NM_146266.1	NM_146266.1		257666	49170035	NM_146266.1	Olfr772	NP_666378.1	ILMN_2835003	002690577	S	790	GAGGTGGCCATCAACAAGGGTGTGACAGTTCTCACTACTTCCATTGCCCC	10	-	128611236-128611285	10qD3	Mus musculus olfactory receptor 772 (Olfr772), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR114-3; GA_x5J8B7W1NLL-1408-2343	MOR114-3; GA_x5J8B7W1NLL-1408-2343
Mus musculus	RefSeq	ILMN_199823	ILMN_199823	LOC383060	XM_356830.1	XM_356830.1			38077697	XM_356830.1	LOC383060		ILMN_2536609	005360201	S	444	GACAAAAGGTGTCTGTTACCTGAAAGAGCTGGTGTGGCGCCCGACGTGGA										
Mus musculus	RefSeq	ILMN_247174	ILMN_247174	COMP	NM_016685.1	NM_016685.1		12845	7710009	NM_016685.1	Comp	NP_057894.1	ILMN_2869110	004900242	S	2357	ATCCCTCTGAAGGGGTGTTTGGCCTGGGGAGGAGAGGCAAATAAAGTACG	8	+	72905906-72905955	8qB3.3	Mus musculus cartilage oligomeric matrix protein (Comp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213163	ILMN_213163	ABR	NM_198018.1	NM_198018.1		109934	37574112	NM_198018.1	Abr	NP_932135.1	ILMN_2634300	000380703	S	77	TACGCAGCTGACATGCTATTAGGCGGGTGGAGACAGCAGAACCGCTCCTC	11	-	76322795-76322844	11qB5	Mus musculus active BCR-related gene (Abr), transcript variant 1, mRNA.		The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	AU042359; 6330400K15Rik	AU042359; 6330400K15Rik
Mus musculus	RefSeq	ILMN_187913	ILMN_222873	SLC8A1	NM_011406.2	NM_011406.2		20541	119120889	NM_011406.2	Slc8a1	NP_035536.2	ILMN_2448213	003800349	S	18516	CGACTGTGTAACAAATCGTTGTGTTCTCTGTTTTCCTAACCTCACCGTGT	17	-	81772478-81772527	17qE3	Mus musculus solute carrier family 8 (sodium/calcium exchanger), member 1 (Slc8a1), transcript variant A, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	Ncx1; D930008O12Rik; AI852629; MGC90693	Ncx1; D930008O12Rik; AI852629; MGC90693
Mus musculus	RefSeq	ILMN_216327	ILMN_216327	NT5C1B	NM_027588.2	NM_027588.2		70881	24475685	NM_027588.2	Nt5c1b	NP_081864.1	ILMN_2669801	004880754	S	1597	GGCTGGAGCCCCTAAAGGTCCCATCTTAGTGAAGATTCGGCCCCACATCT	12	+	10396795-10396844	12qA1.1	Mus musculus 5'-nucleotidase, cytosolic IB (Nt5c1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4921514H13Rik; CN-IB; AIRP	4921514H13Rik; CN-IB; AIRP
Mus musculus	RefSeq	ILMN_189159	ILMN_232420	BOLL	NM_029267.2	NM_029267.2		75388	142375380	NM_029267.2	Boll	NP_083543.1	ILMN_2747255	006270722	S	260	CAAGATACGGAACTGTGATCCCTAACCGCATCTTTGTAGGAGGAATTGAC	1	-	55417465-55417514	1qC1.2	Mus musculus bol, boule-like (Drosophila) (Boll), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence ISO]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4930554P13Rik; 4930597B14Rik	4930554P13Rik; 4930597B14Rik
Mus musculus	RefSeq	ILMN_220791	ILMN_220791	BLNK	NM_008528.4	NM_008528.4		17060	118130752	NM_008528.4	Blnk	NP_032554.2	ILMN_2726931	006840424	S	1098	TAGATCAACCAAGCCAAACAGTTCCTCAAAGCACATGTCGCCTCCAGGGA	19	-	41043005-41043038:41047076-41047091	19qC3	Mus musculus B-cell linker (Blnk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ly57; SLP-65; Bca; BASH; Lyw-57; Ly-57	Ly57; SLP-65; Bca; BASH; Lyw-57; Ly-57
Mus musculus	RefSeq	ILMN_251426	ILMN_251426	SYN3	NM_013722.1	NM_013722.1		27204	7305534	NM_013722.1	Syn3	NP_038750.1	ILMN_2993083	001110328	S	1610	AGTCAGGCTCTCCACAGCAGCAAAGGTCACCGGGGTCTCCACAGCTATCC	10	-	85487313-85487362	10qC1	Mus musculus synapsin III (Syn3), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC130403	MGC130403
Mus musculus	Riken	ILMN_204619	ILMN_204619	B430004P05RIK	ri|B430004P05|PX00070B10|AK046549|1701					AK046549	B430004P05Rik		ILMN_1240750	004860682	S	1608	ACTTAGGAATCTGAGGCAGGAAGCTTGTGAGTTCAAGGGGGAGCCAGGGC										
Mus musculus	Riken	ILMN_203919	ILMN_203919	9930001I18RIK	ri|9930001I18|PX00119D08|AK036757|2091					AK036757	9930001I18Rik		ILMN_2560983	004900195	S	1811	CAAAGCCCTTGGGAGGTGAAGGCAGGGGGATTAGGAATTCAAAGTCATCC										
Mus musculus	RefSeq	ILMN_241492	ILMN_241492	7420416P09RIK	NM_001033776.1	NM_001033776.1		432677	76253889	NM_001033776.1	7420416P09Rik	NP_001028948.1	ILMN_3162257	006580167	S	2698	GGCTGCTTCCTCAAACCCTCGGTGGAGAAGGACTGAGCTTCACAGAACAC	12	+	85992075-85992124	12qD1	Mus musculus RIKEN cDNA 7420416P09 gene (7420416P09Rik), mRNA.				MGC117755	MGC117755
Mus musculus	RefSeq	ILMN_188233	ILMN_327636	LOC100045143	XR_031313.1	XR_031313.1		100045143	149259171	XR_031313.1	LOC100045143		ILMN_2450932	002450600	S	1525	TCCATTTAACACCTTTAGGAAGCACAGAAAGTTCTATGAGAAATACAACT					PREDICTED: Mus musculus similar to Tpd52 protein (LOC100045143), misc RNA.					
Mus musculus	RefSeq	ILMN_201586	ILMN_201586	SALF-PENDING	XM_140120.4	XM_140120.4			38082940	XM_140120.4	Salf-pending		ILMN_1242853	006270292	S	1825	GTCATTCAGGTCACTGTCGGGTCAGCAAAATATGAGAGCGCCTACCGGGC										
Mus musculus	RefSeq	ILMN_201586	ILMN_201586	SALF-PENDING	XM_140120.4	XM_140120.4			38082940	XM_140120.4	Salf-pending		ILMN_2671214	003120048	S	2702	TCATGTTGAAACTTGGAGGCGCTGCTATCTGATGCAAGACCTGCTGGCCA										
Mus musculus	RefSeq	ILMN_227730	ILMN_227730	OTTMUSG00000010136	NM_001039595.2	NM_001039595.2		545693	118131175	NM_001039595.2	OTTMUSG00000010136	NP_001034684.1	ILMN_2861524	002350035	S	1885	GGCCACCTACATATAAAGATCTCTAGGAGATAGACAAGTCTCTGTCCTCC	4	+	143107564-143107613	4qE1	Mus musculus predicted gene, OTTMUSG00000010136 (OTTMUSG00000010136), mRNA.				MGC118150	MGC118150
Mus musculus	RefSeq	ILMN_188819	ILMN_241132	ZHX3	NM_177263.3	NM_177263.3		320799	40254320	NM_177263.3	Zhx3	NP_796237.2	ILMN_2502623	002100253	S	4386	GGTGCTGGGCATCACTGGACAGATTCCTGTGAGGGTGTTTTTAAAGTTCC	2	-	160596227-160596276	2qH2	Mus musculus zinc fingers and homeoboxes 3 (Zhx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0395; 9530010N21Rik; 1810059C13Rik; Tix1; 4932418O04Rik	mKIAA0395; 9530010N21Rik; 1810059C13Rik; Tix1; 4932418O04Rik
Mus musculus	MEEBO	ILMN_221569	ILMN_221569	2310047K21RIK	scl20526.1.1_7				51706297	XM_488951	2310047K21Rik		ILMN_1238880	003290156	S	1398	TCCTCCTCCCTCTACAACATTTACTTCCAGCAGACTGGTGATCTGGAGTC										
Mus musculus	MEEBO	ILMN_218742	ILMN_218742	RASGRF1	scl36632.28.1_170	NM_011245.1			6755287	NM_011245.1	Rasgrf1		ILMN_2699663	006270465	S	4108	GTCGCGTGCCTCTGTACTTGTTCTCCAGCGTGTGCTTCCCCGAGAATATA						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rac protein signal transduction [goid 35020] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Any process that activates or increases the activity of a GTPase of the Ras superfamily [goid 32320] [evidence IDA]; Any process that initiates the activity of an inactive GTPase of the Rac family through the replacement of GDP by GTP [goid 32863] [evidence IDA]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Interacting selectively with a glutamate receptor [goid 35254] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_196753	ILMN_311049	LOC100039728	XM_001473390.1	XM_001473390.1		100039728	149258278	XM_001473390.1	LOC100039728	XP_001473440.1	ILMN_1222629	006330438	S	83	AGCTGTGGGGGCTGTGGCTCCAGCTGTTGCAAGCCTGTGTGCTGCTGTGT	7	-	149306548-149306597	7qF5	PREDICTED: Mus musculus similar to keratin associated protein 5-4 (LOC100039728), mRNA.					
Mus musculus	RefSeq	ILMN_184558	ILMN_253538	ANKRD11	NM_001081379.1	NM_001081379.1		77087	124487032	NM_001081379.1	Ankrd11	NP_001074848.1	ILMN_2419633	007210228	S	8290	CCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCT	8	-	125407829-125407878	8qE1	Mus musculus ankyrin repeat domain 11 (Ankrd11), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2410104C19Rik; 6330578C09Rik; 9530048I21Rik; 3010027A04Rik; Gm176	2410104C19Rik; 6330578C09Rik; 9530048I21Rik; 3010027A04Rik; Gm176
Mus musculus	RefSeq	ILMN_184558	ILMN_253538	ANKRD11	NM_001081379.1	NM_001081379.1		77087	124487032	NM_001081379.1	Ankrd11	NP_001074848.1	ILMN_2676641	006860468	S	4419	GGATGCAGAGACTTACGGGGTTTCTTACCCCACAAAAGCTGACGTGGAGG	8	-	125416666-125416715	8qE1	Mus musculus ankyrin repeat domain 11 (Ankrd11), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2410104C19Rik; 6330578C09Rik; 9530048I21Rik; 3010027A04Rik; Gm176	2410104C19Rik; 6330578C09Rik; 9530048I21Rik; 3010027A04Rik; Gm176
Mus musculus	RefSeq	ILMN_184558	ILMN_253538	ANKRD11	NM_001081379.1	NM_001081379.1		77087	124487032	NM_001081379.1	Ankrd11	NP_001074848.1	ILMN_2672832	001340767	S	142	AAATGAAGATCAAGTAAGGGGAGGAGAACGATGCCCAAGGGTGGGTGTTC	8	-	125439819-125439868	8qE1	Mus musculus ankyrin repeat domain 11 (Ankrd11), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2410104C19Rik; 6330578C09Rik; 9530048I21Rik; 3010027A04Rik; Gm176	2410104C19Rik; 6330578C09Rik; 9530048I21Rik; 3010027A04Rik; Gm176
Mus musculus	RefSeq	ILMN_184558	ILMN_253538	ANKRD11	NM_001081379.1	NM_001081379.1		77087	124487032	NM_001081379.1	Ankrd11	NP_001074848.1	ILMN_2727235	004610307	S	1146	CGCCCCGTCATTCGCACCTTCCAGCTCCGTCGATGGCAATAACACAGACT	8	-	125419939-125419988	8qE1	Mus musculus ankyrin repeat domain 11 (Ankrd11), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2410104C19Rik; 6330578C09Rik; 9530048I21Rik; 3010027A04Rik; Gm176	2410104C19Rik; 6330578C09Rik; 9530048I21Rik; 3010027A04Rik; Gm176
Mus musculus	RefSeq	ILMN_224353	ILMN_224353	GM757	NM_001033410.1	NM_001033410.1		329360	85701916	NM_001033410.1	Gm757	NP_001028582.1	ILMN_2782813	003850022	S	1764	TTTGAATCTGCTGACCTCAGAGCCTCCGTGCATTCCCAGGCCACCTGAGG	2	-	25056692-25056741	2qA3	Mus musculus gene model 757, (NCBI) (Gm757), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_202407	ILMN_202407	3110001P07RIK	ri|3110001P07|ZX00035A18|AK013971|1454					AK013971	3110001P07Rik		ILMN_1257135	007570022	S	1376	AAGCCCTTGGGTTTTTGTATTATCAACTACCTGATTTTGGCGCCTGGCCC										
Mus musculus	Riken	ILMN_206003	ILMN_206003	A830038H15RIK	ri|A830038H15|PX00155I07|AK043832|2443					AK043832	A830038H15Rik		ILMN_1232103	003290603	S	2230	GGGTTATCCCCATGGAATTCTTCAGCCTCTGCACATATGGGGTGGGCAGC										
Mus musculus	Riken	ILMN_203788	ILMN_203788	A230059K20RIK	ri|A230059K20|PX00128P13|AK038746|665					AK038746	A230059K20Rik		ILMN_1231103	000540291	S	335	CATTGTTGCTGGCACAGGGCGCAAATGCTGTGATTCCAGGTGTCTCTGGC										
Mus musculus	RefSeq	ILMN_208967	ILMN_208967	NR2F6	NM_010150.2	NM_010150.2		13864	112807198	NM_010150.2	Nr2f6	NP_034280.2	ILMN_1215135	000050431	S	737	ACAAGGCTGGTGGGAGCTACCCACGCGCGACCGAGGACGATTCGGCGTCA	8	-	73905065-73905114	8qB3.3	Mus musculus nuclear receptor subfamily 2, group F, member 6 (Nr2f6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IMP]; The synchronization of a circadian rhythm to photoperiod, the intermittent cycle of light (day) and dark (night) [goid 43153] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	Erbal2; AV090102; EAR2; COUP-TF3	Erbal2; AV090102; EAR2; COUP-TF3
Mus musculus	RefSeq	ILMN_208967	ILMN_208967	NR2F6	NM_010150.2	NM_010150.2		13864	112807198	NM_010150.2	Nr2f6	NP_034280.2	ILMN_2777598	003140382	S	1833	CTGGCCCTATGGCTCGGGCTAGTGATAGTCACCTTCCAGGACATACATGG	8	-	73898353-73898381:73898382-73898402	8qB3.3	Mus musculus nuclear receptor subfamily 2, group F, member 6 (Nr2f6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IMP]; The synchronization of a circadian rhythm to photoperiod, the intermittent cycle of light (day) and dark (night) [goid 43153] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	Erbal2; AV090102; EAR2; COUP-TF3	Erbal2; AV090102; EAR2; COUP-TF3
Mus musculus	RefSeq	ILMN_197305	ILMN_197305	LOC268701	XM_193740.1	XM_193740.1			25053216	XM_193740.1	LOC268701		ILMN_1238363	003800433	S	402	GTTGATGGCGATTGTTATGTGGGATGCTTTAGGGTTTGCTTGGGGCAGAC										
Mus musculus	RefSeq	ILMN_210882	ILMN_210882	4930555G01RIK	NM_175393.2	NM_175393.2		108978	31341770	NM_175393.2	4930555G01Rik	NP_780602.1	ILMN_2972249	006100561	S	1568	CTGCATTCTTCAAGGGACCTGGGCTCCATAGTTTCTTCACAGCCAGACTG	14	-	4598042-4598091	14qA1	Mus musculus RIKEN cDNA 4930555G01 gene (4930555G01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_252024	ILMN_252024	ARHGAP19	NM_027667.1	NM_027667.1		71085	58037232	NM_027667.1	Arhgap19	NP_081943.1	ILMN_2872266	001340047	S	1631	CCGACTGATACCTCTAACCCCCTCACTGGATGTCTCTGAAGCTGTGCGTC	19	-	41823308-41823357	19qC3	Mus musculus Rho GTPase activating protein 19 (Arhgap19), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FLJ00368; 4933411B03Rik; mFLJ00368; AW546831; AI120128	FLJ00368; 4933411B03Rik; mFLJ00368; AW546831; AI120128
Mus musculus	RefSeq	ILMN_214392	ILMN_214392	CALY	NM_026769.4	NM_026769.4		68566	146141139	NM_026769.4	Caly	NP_081045.2	ILMN_2647530	000990474	S	415	GATCATGTACAAGGCCATCTGGTATGACCAGTTTACCTGCCCAGATGGCT				7qF4	Mus musculus calcyon neuron-specific vesicular protein (Caly), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IEA]	Interacting selectively with a dopamine receptor [goid 50780] [evidence IEA]	1110004A22Rik; 0710001P07Rik; Calcyon	1110004A22Rik; 0710001P07Rik; Calcyon
Mus musculus	RefSeq	ILMN_223547	ILMN_223547	PFDN2	NM_011070.3	NM_011070.3		18637	47271538	NM_011070.3	Pfdn2	NP_035200.2	ILMN_1219667	006040341	S	231	TGGTTGGAGGTGTGCTGGTGGAGCGGACTGTCAAAGAAGTGCTGCCTGCC	1	+	173286889-173286938	1qH3	Mus musculus prefoldin 2 (Pfdn2), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IDA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	W48336; ESTM27	W48336; ESTM27
Mus musculus	RefSeq	ILMN_188374	ILMN_230307	LOC676865	XR_005068.1	XR_005068.1		676865	94384316	XR_005068.1	LOC676865		ILMN_2452138	004810382	S	375	CACATTGTTCAGAAAACGTAATGAGGGAAAGGAGTCACCAAACAAGCTCT					PREDICTED: Mus musculus similar to ribosomal protein L31 (LOC676865), misc RNA.					
Mus musculus	RefSeq	ILMN_220002	ILMN_316963	TCRG-C	XM_001475166.1	XM_001475166.1		432729	149263913	XM_001475166.1	Tcrg-C	XP_001475216.1	ILMN_2716283	004060128	S	376	AGTATCTAATATATGTCTCAACAAACTACAATCAACGACCCTTAGGAGGG	13	+	19432161-19432210	13qA2	PREDICTED: Mus musculus T-cell receptor gamma, constant region, transcript variant 1 (Tcrg-C), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212847	ILMN_212847	CHEK1	NM_007691.4	NM_007691.4		12649	145966709	NM_007691.4	Chek1	NP_031717.2	ILMN_2630974	000010397	S	2700	CTGATGGTATGCAGTACTGTCTTCCGAGCCTGTATCTCTCAAGTCATGAT				9qA4	Mus musculus checkpoint kinase 1 homolog (S. pombe) (Chek1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence IMP]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IDA]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]	rad27; Chk1; C85740	rad27; Chk1; C85740
Mus musculus	RefSeq	ILMN_212847	ILMN_212847	CHEK1	NM_007691.4	NM_007691.4		12649	145966709	NM_007691.4	Chek1	NP_031717.2	ILMN_2666965	001230348	S	208	GAAGCGGGCCATAGACTGTCCAGAAAATATTAAGAAAGAGATCTGCATCA				9qA4	Mus musculus checkpoint kinase 1 homolog (S. pombe) (Chek1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence IMP]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IDA]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]	rad27; Chk1; C85740	rad27; Chk1; C85740
Mus musculus	RefSeq	ILMN_223130	ILMN_223130	TAF9	NM_027592.1	NM_027592.1		108143	28076974	NM_027592.1	Taf9	NP_081868.1	ILMN_2759702	005310142	S	790	CCGTGAGAAACCTTACACAATCTCAGATATGAATATAACTTATTAAAGAT	13	+	101436219-101436268	13qD1	Mus musculus TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf9), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]	AA673500; 4921516M08Rik; 2810046E22Rik; 2310012M09Rik; Taf2g; AU045423; MGC117979	AA673500; 4921516M08Rik; 2810046E22Rik; 2310012M09Rik; Taf2g; AU045423; MGC117979
Mus musculus	RefSeq	ILMN_215710	ILMN_215710	PTPRF	NM_011213.2	NM_011213.2		19268	115648047	NM_011213.2	Ptprf	NP_035343.2	ILMN_2662690	000060400	S	5894	CGGTATGAGGGTGTGGTTGACATGTTCCAGACCGTGAAGACCCTCCGCAC	4	-	117883001-117883050	4qD2.1	Mus musculus protein tyrosine phosphatase, receptor type, F (Ptprf), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	LARS; AA591035; LAR	LARS; AA591035; LAR
Mus musculus	RefSeq	ILMN_210271	ILMN_210271	PRLPC3	NM_023741.1	NM_023741.1		74188	21699033	NM_023741.1	Prlpc3	NP_076230.1	ILMN_2786010	006110307	S	316	CTGGTTCGGCGGGATGAGATTGTTTTCAGAGCTGCATCTCACTGCCATTC	13	-	27517082-27517131	13qA3.1	Mus musculus prolactin-like protein C 3 (Prlpc3), mRNA.				AV036230; PLP-Cgamma; 1600032B14Rik; RP23-117C5.4	AV036230; PLP-Cgamma; 1600032B14Rik; RP23-117C5.4
Mus musculus	RefSeq	ILMN_215325	ILMN_215325	HKDC1	NM_145419.1	NM_145419.1		216019	21703835	NM_145419.1	Hkdc1	NP_663394.1	ILMN_2658130	002260577	S	3365	CCAGGTACTGTTTATCATTCATGTGACACAGTAGGTGTCGCTGTTTTCTG	10	-	61845953-61846002	10qB4	Mus musculus hexokinase domain containing 1 (Hkdc1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [evidence IEA]	MGC28816; BC016235	MGC28816; BC016235
Mus musculus	Riken	ILMN_206287	ILMN_206287	9530065M15RIK	ri|9530065M15|PX00113G04|AK079264|3036					AK079264	9530065M15Rik		ILMN_1214117	004850292	S	2786	ATGGCCCATGCCTAGCTCACATCTGCACTCAGCACAGTGAGGGTTTCTGG										
Mus musculus	MEEBO	ILMN_221478	ILMN_221478	GYS1	scl0014936.1_71	NM_030678.2			31560021	NM_030678.2	Gys1		ILMN_1251254	007400470	S	2663	CCTACACCCGAATCAGCCAAGTTCAGAGTTATGACATTTCAGGGATTAAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Intracellular foci at which aggregated proteins have been sequestered [goid 16234] [evidence IDA]	The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: UDP-glucose + (1,4)-alpha-D-glucosyl(n) = UDP + (1,4)-alpha-D-glucosyl(n+1) [goid 4373] [evidence IMP]		
Mus musculus	RefSeq	ILMN_196611	ILMN_310780	LOC100043555	XM_001480194.1	XM_001480194.1		100043555	149255329	XM_001480194.1	LOC100043555	XP_001480244.1	ILMN_1225998	000940328	S	5962	ACAGTGAAATGGAATAGAGGACAGGGGAGGGTTGGTGGAACCCAGCCGTC	6	+	86951740-86951789	6qD1	PREDICTED: Mus musculus similar to Aak1 protein (LOC100043555), mRNA.					
Mus musculus	RefSeq	ILMN_186417	ILMN_310780	LOC100043555	XM_001480194.1	XM_001480194.1		100043555	149255329	XM_001480194.1	LOC100043555	XP_001480244.1	ILMN_2435373	001340450	S	7305	GTAATACCTCTCATTGCAGGCTGTTGGGTTTCTGTCGTTCACTCGGTGTG	6	+	86953083-86953132	6qD1	PREDICTED: Mus musculus similar to Aak1 protein (LOC100043555), mRNA.					
Mus musculus	RefSeq	ILMN_198385	ILMN_198385	LOC381195	XM_355125.1	XM_355125.1			38084789	XM_355125.1	LOC381195		ILMN_1218399	001090240	S	341	GGCAGCTGTACCACCATGATGCCAAGACTCAACAGAGACTGCAGGCCTCC										
Mus musculus	RefSeq	ILMN_197883	ILMN_253469	BC057079	NM_001081184.1	NM_001081184.1		230393	124487122	NM_001081184.1	BC057079	NP_001074653.1	ILMN_2529696	006840592	S	1198	GGCCCCTCCAGGCAGCAGTTAGCTCTCAGTCTTGTGGAAGTGCTACAGAA	4	+	87831909-87831958	4qC4	Mus musculus cDNA sequence BC057079 (BC057079), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA1797	mKIAA1797
Mus musculus	RefSeq	ILMN_223158	ILMN_253469	BC057079	NM_001081184.1	NM_001081184.1		230393	124487122	NM_001081184.1	BC057079	NP_001074653.1	ILMN_2760064	000840546	S	5618	CTGTGTGCGTGGCCAGGAGAAGGGTGCATTCCTTGGGTACCTGGGCATTT	4	+	88056737-88056786	4qC4	Mus musculus cDNA sequence BC057079 (BC057079), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA1797	mKIAA1797
Mus musculus	RefSeq	ILMN_196852	ILMN_315969	LOC631071	XM_001473773.1	XM_001473773.1		631071	149258353	XM_001473773.1	LOC631071	XP_001473823.1	ILMN_1252009	003310021	S	60	GTCTGGGCCCTAGAGATGTAGCCTGGGGTCCCCAAACCAAGGCCGAATGC	8	+	4087335-4087384	8qA1.1	PREDICTED: Mus musculus similar to RIKEN cDNA 2610208M17 gene (LOC631071), mRNA.					
Mus musculus	RefSeq	ILMN_194932	ILMN_239549	ZFP71-RS1	XM_001006930.1	XM_001006930.1		235907	94412142	XM_001006930.1	Zfp71-rs1	XP_001006930.1	ILMN_2511000	007150600	S	3599	CATATAAGATTGAGGAATGGGGCAAGTAAAGACTTTGGAATCATTCACAC					PREDICTED: Mus musculus zinc finger protein 71, related sequence 1 (Zfp71-rs1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218239	ILMN_218239	CTXN1	NM_183315.1	NM_183315.1		330695	34304000	NM_183315.1	Ctxn1	NP_899138.1	ILMN_1255166	003780427	S	831	GGCAGGCTTTCTTCGACTCACATTGGACGCTGCCTACCTATAATGCACGG	8	-	4257927-4257976	8qA1.1	Mus musculus cortexin 1 (Ctxn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BC028881; Ctxn; MGC25920	BC028881; Ctxn; MGC25920
Mus musculus	MEEBO	ILMN_219439	ILMN_219439	A730091E08RIK	scl00319459.1_119	NM_176917.2			31342381	NM_176917.2	A730091E08Rik		ILMN_1247820	000630687	S	1963	TGTTTGTGAGAAAACCTGAAAGAAAGCAAGAGTCTTGTGACTTCAGATTC										
Mus musculus	RefSeq	ILMN_225310	ILMN_225310	ELK3	NM_205536.1	NM_205536.1		13713	45383917	NM_205536.1	Elk3	NP_991099.1	ILMN_3119014	006110519	A	1473	TGCTGAACTCCGCTTGCATACACGATGTAACCAGCTGTGCCTTCCTTTGC	10	-	92712308-92712357	10qC2	Mus musculus ELK3, member of ETS oncogene family (Elk3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Sap-2; D430049E23Rik; Etrp; Net; Erp	Sap-2; D430049E23Rik; Etrp; Net; Erp
Mus musculus	RefSeq	ILMN_209011	ILMN_209011	CALU	NM_184053.2	NM_184053.2		12321	119672915	NM_184053.2	Calu	NP_908942.1	ILMN_1216590	001410091	S	453	TCAAGACGGCTTAATCTCCTGGGATGAGTACAGAAACGTGACTTATGGCA	6	+	29311695-29311744	6qA3.3	Mus musculus calumenin (Calu), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	9530075H20Rik	9530075H20Rik
Mus musculus	RefSeq	ILMN_195003	ILMN_240551	AZI2	NM_013727.3	NM_013727.3		27215	114326519	NM_013727.3	Azi2	NP_038755.1	ILMN_2689632	000160475	S	3218	GAGGGAATCCCCTCTAACTAGTAGTAACCGTTATCAAAAAGGATTGCTAG	9	+	117972779-117972828	9qF3	Mus musculus 5-azacytidine induced gene 2 (Azi2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IDA]		AZ2; AA410145	AZ2; AA410145
Mus musculus	RefSeq	ILMN_222452	ILMN_210676	GPSM1	NM_153410.4	NM_153410.4		67839	146149078	NM_153410.4	Gpsm1	NP_700459.2	ILMN_1226151	000430482	S	3315	CCTCTCGGGTCAGAAAGGACCCATGAACAACATGGCAAACACATGTAAGC				2qA3	Mus musculus G-protein signalling modulator 1 (AGS3-like, C. elegans) (Gpsm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW107933; 1810037C22Rik; Ags3	AW107933; 1810037C22Rik; Ags3
Mus musculus	RefSeq	ILMN_210676	ILMN_210676	GPSM1	NM_153410.4	NM_153410.4		67839	146149078	NM_153410.4	Gpsm1	NP_700459.2	ILMN_1243154	005670360	S	3266	GCTTACATGTGTTTGCCATGTTGTTCATGGGTCCTTTCTGACCCGAGAGG				2qA3	Mus musculus G-protein signalling modulator 1 (AGS3-like, C. elegans) (Gpsm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW107933; 1810037C22Rik; Ags3	AW107933; 1810037C22Rik; Ags3
Mus musculus	RefSeq	ILMN_184194	ILMN_258659	CYTH4	NM_028195.3	NM_028195.3		72318	89337279	NM_028195.3	Cyth4	NP_082471.2	ILMN_2416628	007160044	S	2665	CTTTGGTCCCTTTCCCCTCTCTGGTTCTCCACTTCTTCCCTGACACCAAG	15	+	78452323-78452372	15qE1	Mus musculus cytohesin 4 (Cyth4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	AI467541; 5830469K17Rik; 2510004M07Rik; mFLJ00017; FLJ00017	AI467541; 5830469K17Rik; 2510004M07Rik; mFLJ00017; FLJ00017
Mus musculus	RefSeq	ILMN_184194	ILMN_258659	CYTH4	NM_028195.3	NM_028195.3		72318	89337279	NM_028195.3	Cyth4	NP_082471.2	ILMN_1251229	002060121	S	1324	TGTCGGCAAGTAGTGAACTTCCAGGAGGCGGTGCTGGCAACCTCGTAGGG	15	+	78450982-78450994:78450995-78451031	15qE1	Mus musculus cytohesin 4 (Cyth4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	AI467541; 5830469K17Rik; 2510004M07Rik; mFLJ00017; FLJ00017	AI467541; 5830469K17Rik; 2510004M07Rik; mFLJ00017; FLJ00017
Mus musculus	RefSeq	ILMN_196527	ILMN_196527	5832418A03	XM_146604.4	XM_146604.4			38089368	XM_146604.4	5832418A03		ILMN_2524657	006250202	S	1666	AGAAAGTGACTGTGTGGTAGCTGGTAAGGACCAGAGGCAGGTGCTGGACC										
Mus musculus	RefSeq	ILMN_197303	ILMN_197303	LOC380866	XM_358447.1	XM_358447.1			38075060	XM_358447.1	LOC380866		ILMN_1242738	002230239	S	205	CTCCCAGCCAGGAGTCTGGAAGAAGCCAGCAGGCAGTGTAGTCATTTGGT										
Mus musculus	RefSeq	ILMN_201515	ILMN_201515	PRL2C2	NM_031191.1	NM_031191.1		18811	13654250	NM_031191.1	Prl2c2	NP_112468.1	ILMN_2617996	004760477	S	468	CCGGAACGGGGTTAATGCCCTCATGAGCACCATGCTTCAGAATGGAGATG	13	-	13088663-13088678:13089552-13089585	13qA1	Mus musculus prolactin family 2, subfamily c, member 2 (Prl2c2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A process that modulates the formation of a microvillus [goid 32534] [evidence IDA]; Any process that activates or increases angiogenesis [goid 45766] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the migration of the endothelial cells of blood vessels [goid 43536] [evidence IDA]; The extension of new blood vessels from existing capillaries into avascular tissues resulting from the proliferation of blood vessel endothelial cells [goid 2040] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections [goid 31346] [evidence IDA]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PLF-1; Plf; MRP-1	PLF-1; Plf; MRP-1
Mus musculus	RefSeq	ILMN_201515	ILMN_201515	PRL2C2	NM_031191.1	NM_031191.1		18811	13654250	NM_031191.1	Prl2c2	NP_112468.1	ILMN_1259967	002450215	S	297	AGGAACAAGCCAGGCTCACACACTATTCAGCTCTTCTGAAATCAGGAGCC	13	-	13089707-13089734:13090848-13090869	13qA1	Mus musculus prolactin family 2, subfamily c, member 2 (Prl2c2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A process that modulates the formation of a microvillus [goid 32534] [evidence IDA]; Any process that activates or increases angiogenesis [goid 45766] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the migration of the endothelial cells of blood vessels [goid 43536] [evidence IDA]; The extension of new blood vessels from existing capillaries into avascular tissues resulting from the proliferation of blood vessel endothelial cells [goid 2040] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections [goid 31346] [evidence IDA]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PLF-1; Plf; MRP-1	PLF-1; Plf; MRP-1
Mus musculus	RefSeq	ILMN_222381	ILMN_214833	JAK2	NM_008413.2	NM_008413.2		16452	114326479	NM_008413.2	Jak2	NP_032439.2	ILMN_2748786	006650113	S	306	CGACGGGAACAAGATGTGAACTGTTTTCCCTCCCCAGAAGAAGAGGCCCT	19	+	29326941-29326990	19qC1	Mus musculus Janus kinase 2 (Jak2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IMP]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The transport of dimerized STAT (Signal Transducers and Activators of Transcription) proteins into the nucleus following activation by members of the janus activated kinase (JAK) family of tyrosine kinases [goid 7262] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 7260] [evidence IMP]; The process of introducing a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 7260] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43392] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the interleukin-12 receptor [goid 5143] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA];  [goid 4718] [evidence IDA];  [goid 4718] [evidence IMP]	Fd17; AI504024; C81284	Fd17; AI504024; C81284
Mus musculus	RefSeq	ILMN_214833	ILMN_214833	JAK2	NM_008413.2	NM_008413.2		16452	114326479	NM_008413.2	Jak2	NP_032439.2	ILMN_1245579	002760431	S	3850	GCTCTGTAGCCTTGTGTCTACACATCCTTATCATGATGCTAGCTAGGCAG	19	+	29386390-29386439	19qC1	Mus musculus Janus kinase 2 (Jak2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IMP]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The transport of dimerized STAT (Signal Transducers and Activators of Transcription) proteins into the nucleus following activation by members of the janus activated kinase (JAK) family of tyrosine kinases [goid 7262] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 7260] [evidence IMP]; The process of introducing a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 7260] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43392] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the interleukin-12 receptor [goid 5143] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA];  [goid 4718] [evidence IDA];  [goid 4718] [evidence IMP]	Fd17; AI504024; C81284	Fd17; AI504024; C81284
Mus musculus	RefSeq	ILMN_214833	ILMN_214833	JAK2	NM_008413.2	NM_008413.2		16452	114326479	NM_008413.2	Jak2	NP_032439.2	ILMN_1254831	004290292	S	2727	GTGGACAGAGTTAGCAAACCTTATAAATAATTGCATGGACTATGAGCCAG	19	+	29373122-29373171	19qC1	Mus musculus Janus kinase 2 (Jak2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IMP]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The transport of dimerized STAT (Signal Transducers and Activators of Transcription) proteins into the nucleus following activation by members of the janus activated kinase (JAK) family of tyrosine kinases [goid 7262] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 7260] [evidence IMP]; The process of introducing a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 7260] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43392] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the interleukin-12 receptor [goid 5143] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA];  [goid 4718] [evidence IDA];  [goid 4718] [evidence IMP]	Fd17; AI504024; C81284	Fd17; AI504024; C81284
Mus musculus	MEEBO	ILMN_191656	ILMN_191656	IGHV1S135_AF304556_IG_HEAVY_VARIABLE_1S135_43	IGHV1S135_AF304556_Ig_heavy_variable_1S135_43						IGHV1S135_AF304556_Ig_heavy_variable_1S135_43		ILMN_1241705	005870296	S	19	CCTGCAAGGCTTCTGGTTACTCATTCACTGACTACAACATGTACTGGGTG										
Mus musculus	RefSeq	ILMN_216986	ILMN_216986	RDHE2	NM_181989.1	NM_181989.1		242285	32526862	NM_181989.1	Rdhe2	NP_871789.1	ILMN_1235403	000630452	S	991	CATAGATGCCATTCTCCAGGAGCAGCTCTACTTGTATATGCCCAAGTTTT	4	-	3932668-3932717	4qA1	Mus musculus retinal short chain dehydrogenase reductase 2 (Rdhe2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC124012; Scdr9; MGC124013	MGC124012; Scdr9; MGC124013
Mus musculus	RefSeq	ILMN_251055	ILMN_251055	CNTNAP4	NM_130457.2	NM_130457.2		170571	31982590	NM_130457.2	Cntnap4	NP_569724.2	ILMN_2932508	000130193	S	4455	GGAAATGCTTCTGAGATCCTGTTTGGCTGGTGTTCGCATCTTCAATGGCC	8	+	115406212-115406261	8qE1	Mus musculus contactin associated protein-like 4 (Cntnap4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Caspr4; E130114F09Rik	Caspr4; E130114F09Rik
Mus musculus	RefSeq	ILMN_218865	ILMN_251055	CNTNAP4	NM_130457.2	NM_130457.2		170571	31982590	NM_130457.2	Cntnap4	NP_569724.2	ILMN_2736242	003390286	S	4060	TCCTTTTACTAGCCAGGGGCTCTCAGAGGACGAGAACTGCTCTAACCCTG	8	+	115405817-115405866	8qE1	Mus musculus contactin associated protein-like 4 (Cntnap4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Caspr4; E130114F09Rik	Caspr4; E130114F09Rik
Mus musculus	RefSeq	ILMN_211018	ILMN_211018	MIPEP	NM_027436.2	NM_027436.2		70478	142377084	NM_027436.2	Mipep	NP_081712.1	ILMN_2737310	006650634	S	2855	GCCCACTGAGTTTCCAGAACTGTCCATCCCACAAACCATATATTGGTACC	14	+	61523306-61523315:61524008-61524047	14qD1	Mus musculus mitochondrial intermediate peptidase (Mipep), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	5730405E07Rik	5730405E07Rik
Mus musculus	RefSeq	ILMN_211018	ILMN_211018	MIPEP	NM_027436.2	NM_027436.2		70478	142377084	NM_027436.2	Mipep	NP_081712.1	ILMN_1222492	001030731	S	1911	CGCTCCAGCTTCAGCGATCACTGAGGAGACATTTTCTGACAAGCCTTAAA	14	+	61522362-61522411	14qD1	Mus musculus mitochondrial intermediate peptidase (Mipep), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	5730405E07Rik	5730405E07Rik
Mus musculus	RefSeq	ILMN_197989	ILMN_252511	LOC677448	XR_005062.2	XR_005062.2		677448	149267941	XR_005062.2	LOC677448		ILMN_1217826	004890114	S	1470	TGGATCAACAAGCAGGAGTATGATGAGTCAGGCCCCACCAGCGTCCATCG				16qC1.3	PREDICTED: Mus musculus similar to actin (LOC677448), misc RNA.					
Mus musculus	MEEBO	ILMN_187899	ILMN_187899	TTYH1	scl33140.15_600				47825407	NM_001001454	Ttyh1		ILMN_2448080	006370653	S	18	CTTTCCAGCGTCACAGTCCAGTGGCTACTCCCATTCCTCAAGCGACGCGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The portion of the plasma membrane surrounding a filopodium [goid 31527] [evidence IDA]; The end of a filopodium distal to the body of the cell [goid 32433] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IDA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212414	ILMN_212414	FBLN2	NM_007992.2	NM_007992.2		14115	124517703	NM_007992.2	Fbln2	NP_032018.2	ILMN_2626153	005900152	S	2315	GGAAACAGTTCTGTGTGAACACCCTGGGATCCTTCTACTGTGTCAACCAC	6	+	91209663-91209712	6qD1	Mus musculus fibulin 2 (Fbln2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5730577E14Rik	5730577E14Rik
Mus musculus	RefSeq	ILMN_216639	ILMN_216639	MRGPRE	NM_175534.2	NM_175534.2		244238	31342123	NM_175534.2	Mrgpre	NP_780743.1	ILMN_2673484	007210148	S	3102	GGACACCCACTTCTTCATGGGGGAAAGCCCATGCCAGCCTTACAGGTGTC	7	-	150964823-150964872	7qF5	Mus musculus MAS-related GPR, member E (Mrgpre), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Ebrt3; MrgE; C130069N09Rik	Ebrt3; MrgE; C130069N09Rik
Mus musculus	Riken	ILMN_201972	ILMN_201972	2610017A06RIK	ri|2610017A06|ZX00033D07|AK011430|1426					AK011430	2610017A06Rik		ILMN_2546026	002260086	S	594	CGAGGCCCAGATGAGCTGCACTACAGAAGGGAGACCTGGTGAAAGTTCTG										
Mus musculus	RefSeq	ILMN_215232	ILMN_215232	RAB17	NM_008998.3	NM_008998.3		19329	142386732	NM_008998.3	Rab17	NP_033024.1	ILMN_2752490	006020019	S	652	CTACTTCAGGGGTGCCAATGCTGCGCTCCTGGTTTATGACATCACTCGGA	1	-	92857689-92857738	1qD	Mus musculus RAB17, member RAS oncogene family (Rab17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AW413472	AW413472
Mus musculus	Riken	ILMN_204774	ILMN_204774	C130017I15RIK	ri|C130017I15|PX00167J20|AK047868|2850					AK047868	C130017I15Rik		ILMN_1234729	004150338	S	2539	ATCGTTGAGCGAGCAGAACTAATCCAGGTGACCGCAGGAGACCCAGCCAC										
Mus musculus	RefSeq	ILMN_212118	ILMN_212118	SETD1A	NM_178029.3	NM_178029.3		233904	119508421	NM_178029.3	Setd1a	NP_821172.2	ILMN_1247099	005220435	S	5707	GGGGCCTTTGGCCCCTAGTCCTGGGAACTCTGTGCCTGGAACCCTGCCTC	7	+	134943409-134943458	7qF3	Mus musculus SET domain containing 1A (Setd1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	mNSC1; mKIAA0339; MGC55143; Nsccn1; BC010250	mNSC1; mKIAA0339; MGC55143; Nsccn1; BC010250
Mus musculus	RefSeq	ILMN_196390	ILMN_196390	2810426P10RIK	XM_148728.1	XM_148728.1			20895633	XM_148728.1	2810426P10Rik		ILMN_1218732	003450068	S	598	GGGACCTCCATCACTCAGATGCTGTTTGTCTTTGTCATCTTCATCTTTCC										
Mus musculus	Riken	ILMN_204185	ILMN_204185	B130065G19RIK	ri|B130065G19|PX00159C11|AK045321|4642					AK045321	B130065G19Rik		ILMN_1259499	001170402	S	4286	CTGGGTCTCAACAGACAACTCAGAAGGCTCCCAAATCCAAAGCCAGACAC										
Mus musculus	RefSeq	ILMN_211399	ILMN_211399	FGFR1OP2	NM_026218.2	NM_026218.2		67529	118601005	NM_026218.2	Fgfr1op2	NP_080494.1	ILMN_2615468	002490068	S	2554	AAGAAAAGCGGCACAGACGAGATGAGTCAGATCGATGTATTGAGCAGGTC	6	+	146547446-146547495	6qG3	Mus musculus FGFR1 oncogene partner 2 (Fgfr1op2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1500031J01Rik	1500031J01Rik
Mus musculus	RefSeq	ILMN_211399	ILMN_211399	FGFR1OP2	NM_026218.2	NM_026218.2		67529	118601005	NM_026218.2	Fgfr1op2	NP_080494.1	ILMN_2628188	007150376	S	44	GGTTCTGGTCCGCCCGGGATGGGGCCGAGACGAGTGGGTTTCCCGTACGT	6	+	146526476-146526525	6qG3	Mus musculus FGFR1 oncogene partner 2 (Fgfr1op2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1500031J01Rik	1500031J01Rik
Mus musculus	Riken	ILMN_203525	ILMN_203525	4732494O09RIK	ri|4732494O09|PX00052L12|AK029125|4151					AK029125	4732494O09Rik		ILMN_2557976	004120747	S	3454	AAATGCTCTCACTTTTCAACCAAGGGCAGGCCTGTGCATGTGGTCTGTGC										
Mus musculus	RefSeq	ILMN_211046	ILMN_211046	CTNNA2	NM_009819.1	NM_009819.1		12386	6753295	NM_009819.1	Ctnna2	NP_033949.1	ILMN_1241780	006180528	S	2654	TTGTGATGTCATAGATGGGGGCAGGGCTAGTCAACTTTCTACCCACCTCC	6	-	76852325-76852374	6qC3	Mus musculus catenin (cadherin associated protein), alpha 2 (Ctnna2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Catna2; cdf; AI481747; Catna; chp	Catna2; cdf; AI481747; Catna; chp
Mus musculus	RefSeq	ILMN_211046	ILMN_211046	CTNNA2	NM_009819.1	NM_009819.1		12386	6753295	NM_009819.1	Ctnna2	NP_033949.1	ILMN_2769762	006550091	S	3476	CTGTTTGAGTGCAAAACTGTACTAGCCAATACGCTGAAGTGTGTGGCCCA	6	-	76832054-76832103	6qC3	Mus musculus catenin (cadherin associated protein), alpha 2 (Ctnna2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Catna2; cdf; AI481747; Catna; chp	Catna2; cdf; AI481747; Catna; chp
Mus musculus	RefSeq	ILMN_211046	ILMN_211046	CTNNA2	NM_009819.1	NM_009819.1		12386	6753295	NM_009819.1	Ctnna2	NP_033949.1	ILMN_2611924	005900332	S	209	TTTAAAATGGGATCCCAAAAGTTTGGAAATCCGGACACTCACAGTGGAAA	6	-	77795489-77795538	6qC3	Mus musculus catenin (cadherin associated protein), alpha 2 (Ctnna2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Catna2; cdf; AI481747; Catna; chp	Catna2; cdf; AI481747; Catna; chp
Mus musculus	RefSeq	ILMN_214621	ILMN_214621	FEM1B	NM_010193.3	NM_010193.3		14155	46402518	NM_010193.3	Fem1b	NP_034323.1	ILMN_1230162	005090017	S	6081	GGCCTTAACCTACTGGCAGGACCCTGTCCTTTGTAATGTTCACCGCACCC	9	-	62639950-62639999	9qB	Mus musculus feminization 1 homolog b (C. elegans) (Fem1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		mKIAA0396	mKIAA0396
Mus musculus	MEEBO	ILMN_222385	ILMN_222385	FCER1G	scl15940.5.1_15	NM_010185.2			40254589	NM_010185.2	Fcer1g		ILMN_2748875	002230039	S	308	CAGAACAGACGTGCTTGGCTGCATTCTTTTCCCACTTCTAATTCTCTCCG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A protein complex composed of an Fc-epsilon RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without an Fc-episilon RI beta chain and additional signaling components. The complex functions primarily as an activating receptor for IgE [goid 32998] [evidence IMP]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IMP]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-10 production [goid 32733] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 42590] [evidence IMP]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of type IIa hypersensitivity, a type of inflammatory response [goid 1798] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of type III hypersensitivity, a type of inflammatory response [goid 1805] [evidence IMP]; A series of molecular signals generated as a consequence of a the binding of the Fc portion of an immunoglobulin by an Fc receptor capable of activating or perpetuating an immune response. The Fc portion of an immunoglobulin is its C-terminal constant region [goid 2431] [evidence IMP]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IDA]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a mast cell apoptosis [goid 33026] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a mast cell apoptosis [goid 33026] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of mast cell cytokine production [goid 32765] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of mast cell cytokine production [goid 32765] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mast cell degranulation [goid 43306] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mast cell degranulation [goid 43306] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of type I hypersensitivity, a type of inflammatory response [goid 1812] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IMP]; Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IDA]; Combining with an immunoglobulin of the IgE isotype via the Fc region to initiate a change in cell activity [goid 19767] [evidence IDA]; Combining with an immunoglobulin of the IgE isotype via the Fc region to initiate a change in cell activity [goid 19767] [evidence IMP]; Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IDA]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IMP]		
Mus musculus	Riken	ILMN_203533	ILMN_203533	B830028B07RIK	ri|B830028B07|PX00073I17|AK046845|2958					AK046845	B830028B07Rik		ILMN_1253435	006270184	S	2830	GGGTGTGTTCAGACCCTTTGTAATCTCAGAACTCAGAGGAGGCCATGGTC										
Mus musculus	RefSeq	ILMN_208739	ILMN_208739	GHSR	NM_177330.4	NM_177330.4		208188	146198834	NM_177330.4	Ghsr	NP_796304.1	ILMN_1221883	007150050	S	1201	CCCCATTCTCTACAACATCATGTCCAAGAAGTACCGGGTGGCCGTGTTCA				3qA3	Mus musculus growth hormone secretagogue receptor (Ghsr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that increases appetite [goid 32100] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat [goid 32094] [evidence IDA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IDA]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IGI]; Any process that increases the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43568] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51963] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [evidence IEA]	C530020I22Rik	C530020I22Rik
Mus musculus	RefSeq	ILMN_208739	ILMN_208739	GHSR	NM_177330.4	NM_177330.4		208188	146198834	NM_177330.4	Ghsr	NP_796304.1	ILMN_2589048	000520082	S	4291	CTGCGGTGCAGGCTGTTGTGGTTATGATGTTGAGGTTATGATGGACAGAC				3qA3	Mus musculus growth hormone secretagogue receptor (Ghsr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that increases appetite [goid 32100] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat [goid 32094] [evidence IDA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IDA]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IGI]; Any process that increases the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43568] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51963] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [evidence IEA]	C530020I22Rik	C530020I22Rik
Mus musculus	RefSeq	ILMN_196792	ILMN_321631	LOC100039623	XM_001473374.1	XM_001473374.1		100039623	149245274	XM_001473374.1	LOC100039623	XP_001473424.1	ILMN_1230346	002850544	S	1483	TCCTTTCCCCAAGGTGAAATGGAGGGTGCTGTGGGGCCCTGCCCACTCCA	1	-	163655862-163655911	1qH2.1	PREDICTED: Mus musculus similar to Aph1a protein (LOC100039623), mRNA.					
Mus musculus	RefSeq	ILMN_199871	ILMN_199871	LOC384019	XM_357372.1	XM_357372.1			38078463	XM_357372.1	LOC384019		ILMN_1241220	002340307	S	195	GCATGGAATCGTTAGAGAAAATAGCATTGACCTATCTAATGCCAGCTCAG										
Mus musculus	Riken	ILMN_203503	ILMN_203503	E130301F19RIK	ri|E130301F19|PX00092J08|AK053713|3450					AK053713	E130301F19Rik		ILMN_1255758	004260711	S	2562	CTGAGGCACAGGTCTCAGAGGCGCAGCATCCTTAATTTACTGTCCTCCCA										
Mus musculus	RefSeq	ILMN_217377	ILMN_217377	TGM4	NM_177911.3	NM_177911.3		331046	142344020	NM_177911.3	Tgm4	NP_808579.1	ILMN_1245431	005260424	S	2487	GAAAGCATCTTGGAGCTGGTCCTGGGTCAGGCACTACACCCTCTTATCCC	9	+	122976396-122976445	9qF4	Mus musculus transglutaminase 4 (prostate) (Tgm4), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IEA]	9530008N10Rik; TGP; Eapa1	9530008N10Rik; TGP; Eapa1
Mus musculus	MEEBO	ILMN_215427	ILMN_215427	DSCR1	scl0001766.1_49	NM_019466.2			31542573	NM_019466.2	Dscr1		ILMN_2701991	003440615	S	2062	GCCGCCGGCCCAGTGTTTCTAGTTCTGCACTTTGAACCGGAGAGGCTAAC										
Mus musculus	RefSeq	ILMN_192153	ILMN_192153	TRAF2	NM_009422.2	NM_009422.2		22030	83921632	NM_009422.2	Traf2	NP_033448.2	ILMN_1215661	003060474	S	2908	GCTCTAGGATTTCTCCATAGACATTGCCCATTTCTGTCCGTTTTTTCTAC	2	-	25373542-25373591	2qA3	Mus musculus Tnf receptor-associated factor 2 (Traf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI325259	AI325259
Mus musculus	Riken	ILMN_203727	ILMN_203727	ITGAV	ri|9830116F24|PX00118A23|AK036485|2532					AK036485	Itgav		ILMN_1254152	003850424	S	2388	TCAGTCTGGGCAGTGATGACAGATGCCTTTAATCCCAGCATTCAGAAGGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte [goid 43277] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210555	ILMN_210555	GBP4	NM_008620.3	NM_008620.3		17472	126157520	NM_008620.3	Gbp4	NP_032646.2	ILMN_2606792	003460132	S	2589	GTTAGATTGGGAACAAATTTTATATGACTTTGTTCTTGAAGTACTGTATA	5	-	105546622-105546671	5qE5	Mus musculus guanylate binding protein 4 (Gbp4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW228052; Mpa2; Mag-2; mKIAA4245; Mpa-2; KIAA4245	AW228052; Mpa2; Mag-2; mKIAA4245; Mpa-2; KIAA4245
Mus musculus	RefSeq	ILMN_219985	ILMN_257580	NIPBL	NM_027707.2	NM_027707.2		71175	49169844	NM_027707.2	Nipbl	NP_081983.2	ILMN_1234693	002260519	S	1325	CCTTGTTCATCACCTCGAGATGTTCCTCCAGATATCTTACTAGATTCTCC	15	-	8309178-8309227	15qA1	Mus musculus Nipped-B homolog (Drosophila) (Nipbl), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		C79399; Idn3; 4933421G18Rik; 4921518A06Rik	C79399; Idn3; 4933421G18Rik; 4921518A06Rik
Mus musculus	RefSeq	ILMN_257580	ILMN_257580	NIPBL	NM_027707.2	NM_027707.2		71175	49169844	NM_027707.2	Nipbl	NP_081983.2	ILMN_3048503	001570541	I	8655	AGCGCCGCGATGGCCGCAAACTGGTGCCTTGGGTAGACACTATTAAAGAG	15	-	8241335-8241384	15qA1	Mus musculus Nipped-B homolog (Drosophila) (Nipbl), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		C79399; Idn3; 4933421G18Rik; 4921518A06Rik	C79399; Idn3; 4933421G18Rik; 4921518A06Rik
Mus musculus	RefSeq	ILMN_257580	ILMN_257580	NIPBL	NM_027707.2	NM_027707.2		71175	49169844	NM_027707.2	Nipbl	NP_081983.2	ILMN_3124374	006350358	A	8386	CACAGCAGCAGACACAGAAGATGAGGAGAGTGATGGGGAGGATAGAGGAG	15	-	8242150-8242199	15qA1	Mus musculus Nipped-B homolog (Drosophila) (Nipbl), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		C79399; Idn3; 4933421G18Rik; 4921518A06Rik	C79399; Idn3; 4933421G18Rik; 4921518A06Rik
Mus musculus	Riken	ILMN_205546	ILMN_205546	E330010P20RIK	ri|E330010P20|PX00212I19|AK054292|1748					AK054292	E330010P20Rik		ILMN_1247394	007560176	S	1487	CCCCTGAGGCCCGAAGAGCTTGGATCCCCTTGAGCTAGAGTGACGGGTTT										
Mus musculus	RefSeq	ILMN_210212	ILMN_210212	SERTAD2	NM_021372.2	NM_021372.2		58172	84490404	NM_021372.2	Sertad2	NP_067347.2	ILMN_1231586	006370019	S	1657	CCTGCTGCCCTGGCGTAGGAGAGAAGACATTTGAAGACTGTGTTGCTAAT	11	+	20548953-20549002	11qA3.1	Mus musculus SERTA domain containing 2 (Sertad2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	mKIAA0127; AU021878; MNCb-1504; TRIP-Br2; AB041541; Kiaa0127; Sei2; SEI-2	mKIAA0127; AU021878; MNCb-1504; TRIP-Br2; AB041541; Kiaa0127; Sei2; SEI-2
Mus musculus	RefSeq	ILMN_210212	ILMN_210212	SERTAD2	NM_021372.2	NM_021372.2		58172	84490404	NM_021372.2	Sertad2	NP_067347.2	ILMN_2670886	002760280	S	1715	GTGAACAGGAACAGTTCAAGTGAAGCACAAGGATTAAGTTGGAAAAGCTG	11	+	20549011-20549060	11qA3.1	Mus musculus SERTA domain containing 2 (Sertad2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	mKIAA0127; AU021878; MNCb-1504; TRIP-Br2; AB041541; Kiaa0127; Sei2; SEI-2	mKIAA0127; AU021878; MNCb-1504; TRIP-Br2; AB041541; Kiaa0127; Sei2; SEI-2
Mus musculus	Riken	ILMN_205048	ILMN_205048	A830026L17RIK	ri|A830026L17|PX00154H15|AK043736|2546					AK043736	A830026L17Rik		ILMN_2569591	001110181	S	2295	GCTTTGTAGCCTGGCTCTTCTGCATAGCCATACTGTTATGAGCAGGCACC										
Mus musculus	RefSeq	ILMN_198460	ILMN_331575	LOC100043091	XR_034222.1	XR_034222.1		100043091	149270533	XR_034222.1	LOC100043091		ILMN_1218362	004260601	S	1906	TTCTTGTCCATTACCCGTGTAATCACCTGGCTCTGCTACAAGCACAGAGG	19	+	60156890-60156939	19qD3	PREDICTED: Mus musculus similar to Csf3r protein (LOC100043091), misc RNA.					
Mus musculus	MEEBO	ILMN_222834	ILMN_222834	RBM27	scl0225432.1_95	XM_128924.4			38083815	XM_128924.4	Rbm27		ILMN_2755481	002900440	S	5993	ATAGTATGCCTGTATTATAGTTTTTACAAGATTGTGAACTTGTGTAATAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184938	ILMN_184938	WNT10B	NM_011718.1	NM_011718.1		22410	6756002	NM_011718.1	Wnt10b	NP_035848.1	ILMN_2422848	005820754	S	1923	CTCCTCCACTACAGCCCAGAACCTCCTCTTATGGGACCTCGGGTGACAAT	15	-	98602437-98602486	15qF1	Mus musculus wingless related MMTV integration site 10b (Wnt10b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	Wnt12	Wnt12
Mus musculus	RefSeq	ILMN_184938	ILMN_184938	WNT10B	NM_011718.1	NM_011718.1		22410	6756002	NM_011718.1	Wnt10b	NP_035848.1	ILMN_2432242	006400471	S	17	AATTTTAGCAAAACTAGCATTCTCTGCCACTGAATTATTTGCATATACAT	15	-	98608515-98608564	15qF1	Mus musculus wingless related MMTV integration site 10b (Wnt10b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	Wnt12	Wnt12
Mus musculus	RefSeq	ILMN_222323	ILMN_222323	OLFR1360	NM_146543.1	NM_146543.1		258536	22203784	NM_146543.1	Olfr1360	NP_666754.1	ILMN_2748037	002060630	S	677	TGAGAATAAGATCAGCTGAAGGTCGGCGAAAGGCATTTGGGACATGTGGC	13	-	21766085-21766134	13qA3.1	Mus musculus olfactory receptor 1360 (Olfr1360), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-35; MOR256-10	MOR256-35; MOR256-10
Mus musculus	RefSeq	ILMN_185792	ILMN_228030	SERPINB10	NM_198028.2	NM_198028.2		241197	38569435	NM_198028.2	Serpinb10	NP_932145.2	ILMN_1240353	006940376	S	1161	CTGGAAGTGAAATCAGTGTTCGAATTAAGGCACCTTCCATTGAATTAAAT	1	+	109443519-109443568	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10 (Serpinb10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	9830131G07; BB233602	9830131G07; BB233602
Mus musculus	Riken	ILMN_206968	ILMN_206968	4930570N19RIK	ri|4930570N19|PX00640L08|AK076950|565					AK076950	4930570N19Rik		ILMN_2584046	005220184	S	365	CCAGCGGAAAGGAAGGACAAGACGGGGCACACAACTCCCACACAGCAGTA										
Mus musculus	MEEBO	ILMN_217210	ILMN_217210	D130084M03RIK	scl50625.8.1_226				51830584	XM_484644	D130084M03Rik		ILMN_2680371	006420129	S	3167	GCCCAGTGTCTTGGGCTAAGTGGACACAAAAGAGAGGGGAGCACAGTCAG										
Mus musculus	MEEBO	ILMN_190055	ILMN_190055	SCL0001284.1_18	scl0001284.1_18	AK021409.1			12862292	AK021409.1	scl0001284.1_18		ILMN_2466797	001300630	S	9	CCCTGTAGCGAGTCCCCTAGTCCCGGGCCACAAATGTTCTTGCAAACCCT										
Mus musculus	RefSeq	ILMN_198761	ILMN_198761	LOC236917	XM_142002.1	XM_142002.1			20984760	XM_142002.1	LOC236917		ILMN_1234787	002600504	S	210	TGCTGATTTCCAAGCAGGAGGAAAAGCTAGGCTGGGATGCCTGGTCCACA										
Mus musculus	RefSeq	ILMN_218908	ILMN_218908	MEN1	NM_008583.1	NM_008583.1		17283	6678857	NM_008583.1	Men1	NP_032609.1	ILMN_1219210	004120593	S	2579	GCCCCAGAGCACAGTTGCTACCTGGAAACCAAGGACCATTCAGTCCCTAG	19	+	6335359-6335408	19qA	Mus musculus multiple endocrine neoplasia 1 (Men1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence ISO]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IGI]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the covalent addition of methyl groups to histones [goid 31062] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell division [goid 51781] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organ of an organism [goid 46621] [evidence IDA]; A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IDA]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that activates or increases the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43280] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IGI]; The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone [goid 2051] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell division [goid 51781] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the covalent addition of methyl groups to histones [goid 31062] [evidence IMP]; The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1776] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AW045611	AW045611
Mus musculus	RefSeq	ILMN_218908	ILMN_218908	MEN1	NM_008583.1	NM_008583.1		17283	6678857	NM_008583.1	Men1	NP_032609.1	ILMN_2837476	000160746	S	2512	TGACAGGAGCCCAAGTCACGCCTGAACAGTAGGGCATTCCTCCCACTTGG	19	+	6335292-6335341	19qA	Mus musculus multiple endocrine neoplasia 1 (Men1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence ISO]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IGI]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the covalent addition of methyl groups to histones [goid 31062] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell division [goid 51781] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organ of an organism [goid 46621] [evidence IDA]; A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IDA]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that activates or increases the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43280] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IGI]; The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone [goid 2051] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell division [goid 51781] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the covalent addition of methyl groups to histones [goid 31062] [evidence IMP]; The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1776] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AW045611	AW045611
Mus musculus	RefSeq	ILMN_218908	ILMN_218908	MEN1	NM_008583.1	NM_008583.1		17283	6678857	NM_008583.1	Men1	NP_032609.1	ILMN_2701797	000430458	S	234	TAGAAGGCCCTATATAGCCTTGGTTGAAGGGTCTCAGAAACCGAGCCGCC	19	+	6330572-6330621	19qA	Mus musculus multiple endocrine neoplasia 1 (Men1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence ISO]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IGI]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the covalent addition of methyl groups to histones [goid 31062] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell division [goid 51781] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organ of an organism [goid 46621] [evidence IDA]; A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IDA]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that activates or increases the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43280] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IGI]; The commitment of mesenchymal cells to the specific cell fate of an osteoblast. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone [goid 2051] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell division [goid 51781] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the covalent addition of methyl groups to histones [goid 31062] [evidence IMP]; The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1776] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AW045611	AW045611
Mus musculus	RefSeq	ILMN_212606	ILMN_212606	OLFR689	NM_146750.1	NM_146750.1		258745	22129348	NM_146750.1	Olfr689	NP_666961.1	ILMN_2628377	004220431	S	608	GCCAGTTGACATTGGCCTGGTTGATACTTGGAATTGACATGATTCTGGTC	7	+	112463127-112463176	7qE3	Mus musculus olfactory receptor 689 (Olfr689), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR40-3	MOR40-3
Mus musculus	RefSeq	ILMN_218943	ILMN_218943	HOMEZ	NM_183174.2	NM_183174.2		239099	65301480	NM_183174.2	Homez	NP_898997.2	ILMN_2757356	001690424	S	2692	GGAATTACTGGTAACAATTGGTTAGTCATCTGAAAATAGAGTGCAAGACC	14	-	55474440-55474489	14qC3	Mus musculus homeodomain leucine zipper-encoding gene (Homez), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	mKIAA1443	mKIAA1443
Mus musculus	Riken	ILMN_206750	ILMN_206750	D630037D12RIK	ri|D630037D12|PX00198A03|AK085521|1345					AK085521	D630037D12Rik		ILMN_1220558	004040626	S	1063	AGCGCTCGCTCCCTGGGCTGGGTTTTGAGTCTTTGGAAGACGTGAAGTGT										
Mus musculus	RefSeq	ILMN_197274	ILMN_197274	LOC269292	XM_195132.2	XM_195132.2			38074931	XM_195132.2	LOC269292		ILMN_1223345	003780576	S	438	GGTGGAAAAGGAATGCAAGAACTAGGACACTGAGGCAGACCCTAGTGAGG										
Mus musculus	RefSeq	ILMN_196353	ILMN_196353	A630001G21RIK	NM_177055.2	NM_177055.2			31342691	NM_177055.2	A630001G21Rik		ILMN_2523794	000940215	S	986	CTGGACCAACCACTCTTGAAGGACATCGAGGAGTCCAGGGGCTCAGTCTC										
Mus musculus	RefSeq	ILMN_221434	ILMN_221434	ACOX3	NM_030721.2	NM_030721.2		80911	34328333	NM_030721.2	Acox3	NP_109646.2	ILMN_2949844	006840070	S	3672	ACCAACTGGGTATATCTTGGTCTCTGGGGTAGGGACTGGCTCTCTGGACA	5	+	35956166-35956215	5qB3	Mus musculus acyl-Coenzyme A oxidase 3, pristanoyl (Acox3), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The material contained within the membrane of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase [goid 5782] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: pristanoyl-CoA + O2 = trans-2,3-dehydropristanoyl-CoA + H2O2 [goid 16402] [evidence TAS]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + H2O2 [goid 3997] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	PCOX; BI685180; EST-s59	PCOX; BI685180; EST-s59
Mus musculus	RefSeq	ILMN_221434	ILMN_221434	ACOX3	NM_030721.2	NM_030721.2		80911	34328333	NM_030721.2	Acox3	NP_109646.2	ILMN_2735573	004880370	S	2095	GCGGTGGCCTTGGTAGATGTCATCGCCCCCTCCGACTTTGTTCTGAACTC	5	+	35952397-35952446	5qB3	Mus musculus acyl-Coenzyme A oxidase 3, pristanoyl (Acox3), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The material contained within the membrane of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase [goid 5782] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: pristanoyl-CoA + O2 = trans-2,3-dehydropristanoyl-CoA + H2O2 [goid 16402] [evidence TAS]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + H2O2 [goid 3997] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	PCOX; BI685180; EST-s59	PCOX; BI685180; EST-s59
Mus musculus	RefSeq	ILMN_221434	ILMN_221434	ACOX3	NM_030721.2	NM_030721.2		80911	34328333	NM_030721.2	Acox3	NP_109646.2	ILMN_1254761	002320373	S	3849	GGGTAGAGGCTACATTATTGAAACAAACTTGAAAAGGTCCCATAAAAATG	5	+	35956343-35956392	5qB3	Mus musculus acyl-Coenzyme A oxidase 3, pristanoyl (Acox3), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The material contained within the membrane of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase [goid 5782] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: pristanoyl-CoA + O2 = trans-2,3-dehydropristanoyl-CoA + H2O2 [goid 16402] [evidence TAS]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + H2O2 [goid 3997] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	PCOX; BI685180; EST-s59	PCOX; BI685180; EST-s59
Mus musculus	RefSeq	ILMN_186034	ILMN_254206	EG667583	XM_991341.1	XM_991341.1		667583	94397117	XM_991341.1	EG667583	XP_996435.1	ILMN_2432052	000830110	S	146	GTGCCTCCAACTACTTCCCTTGGTATAAGCAAGAACCTGGAGAGAATCCT	14	+	53621710-53621759	14qC2	PREDICTED: Mus musculus predicted gene, EG667583 (EG667583), mRNA.					
Mus musculus	Riken	ILMN_203588	ILMN_203588	6030408K21RIK	ri|6030408K21|PX00056A04|AK031339|3974					AK031339	6030408K21Rik		ILMN_1218028	001740142	S	3343	GTGGTTAGTGAGAGGCAGACTGCATAGGAGTCAGTGCTTCTAAAGGGTCT										
Mus musculus	RefSeq	ILMN_199490	ILMN_199490	LOC383559	XM_357122.1	XM_357122.1			38073355	XM_357122.1	LOC383559		ILMN_1232637	004540368	S	122	TCAAGTCCGTGGAAGAGAAAGGCTGCTGGGAGAACAAGATTGGCAAGCCC										
Mus musculus	MEEBO	ILMN_222824	ILMN_222824	PRSSL1	scl37751.5.62_171	XM_196763.2			28497722	XM_196763.2	Prssl1		ILMN_2755337	007380040	S	1001	TCAACTCCAGCCGCCGCCCTTAATCCACAGTCACCCTTGTAACCAAGACC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210797	ILMN_210797	BPIL2	NM_177772.3	NM_177772.3		270757	141802277	NM_177772.3	Bpil2	NP_808440.1	ILMN_2609293	003130273	S	2232	TGCTTAATTAAAATTGTTTTCTAACGATGTCAGAATCTATGTGTGAAAGC	10	-	85422478-85422527	10qC1	Mus musculus bactericidal/permeability-increasing protein-like 2 (Bpil2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	4732454E24; MGC130596	4732454E24; MGC130596
Mus musculus	RefSeq	ILMN_208805	ILMN_208805	FAM84A	NM_029007.2	NM_029007.2		105005	31543344	NM_029007.2	Fam84a	NP_083283.2	ILMN_2800051	004900369	S	2719	GGCAAGAGTTTGTGGATTTTTCTCCAAGGGGTACAACCCCAGCCTAACTG	12	-	14155015-14155064	12qA1.1	Mus musculus family with sequence similarity 84, member A (Fam84a), mRNA.				Nse1; 2310003N02Rik; 4731402F03Rik	Nse1; 2310003N02Rik; 4731402F03Rik
Mus musculus	Riken	ILMN_204374	ILMN_204374	2400010G15RIK	ri|9430090G08|PX00110L04|AK035119|2771					AK035119	2400010G15Rik		ILMN_1259897	004120091	S	2524	CAGGTCACCCTTCCACATGGCTTCTGGGGATCGGGTTTAGATTGTCAGCC										
Mus musculus	RefSeq	ILMN_210952	ILMN_210952	GPR172B	NM_029643.2	NM_029643.2		52710	31560046	NM_029643.2	Gpr172b	NP_083919.1	ILMN_2957617	001690408	S	2323	CCCTTCTGCCAAGATCGTCACCTTCAGAGTTTGGTGCAAGGTCCAGGTAC	15	+	76369008-76369057	15qD3	Mus musculus G protein-coupled receptor 172B (Gpr172b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2010003P03Rik; D15Ertd747e; GPCR; PAR2; GPCR42	2010003P03Rik; D15Ertd747e; GPCR; PAR2; GPCR42
Mus musculus	RefSeq	ILMN_210952	ILMN_210952	GPR172B	NM_029643.2	NM_029643.2		52710	31560046	NM_029643.2	Gpr172b	NP_083919.1	ILMN_2610954	000620435	S	1864	CCAAAGAGCAGGCCCAGACCCAGGGATAGATTGGAGCTGCGCGGCCTTCA	15	+	76368549-76368598	15qD3	Mus musculus G protein-coupled receptor 172B (Gpr172b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2010003P03Rik; D15Ertd747e; GPCR; PAR2; GPCR42	2010003P03Rik; D15Ertd747e; GPCR; PAR2; GPCR42
Mus musculus	RefSeq	ILMN_216866	ILMN_216866	GZMG	NM_010375.2	NM_010375.2		14944	70778833	NM_010375.2	Gzmg	NP_034505.1	ILMN_1216490	001820332	S	701	GGAGTTGTATCCTATGGAATAAACAGGACAATCACTCCAGGAGTCTTCAC	14	-	56775577-56775626	14qC3	Mus musculus granzyme G (Gzmg), mRNA.		The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Ctla-7; MGC117682; Ctla7	Ctla-7; MGC117682; Ctla7
Mus musculus	RefSeq	ILMN_214198	ILMN_214198	BMI1	NM_007552.4	NM_007552.4		12151	133893249	NM_007552.4	Bmi1	NP_031578.2	ILMN_2645439	005420368	S	1355	GCAACAGCCCCAGTGCTAACCACCAATCTTCCTTTGCCAGTAGACCTCGA	2	+	18606017-18606066	2qA3	Mus musculus Bmi1 polycomb ring finger oncogene (Bmi1), mRNA.	A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IDA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The modification of histones by addition of acetyl groups [goid 16573] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; An immune response mediated through a body fluid [goid 6959] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]; The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33092] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; The process by which the neural tube is divided into specific regions along the rostrocaudal axis [goid 21903] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pcgf4; AW546694; Bmi-1	Pcgf4; AW546694; Bmi-1
Mus musculus	RefSeq	ILMN_224084	ILMN_231082	RIPK4	NM_023663.5	NM_023663.5		72388	146141137	NM_023663.5	Ripk4	NP_076152.2	ILMN_2774497	003850086	S	3247	GTTGTACTCTGAGGAGTCAGATTCGATAGCCTTTTGTTGTACCTTCCCCA				16qC4	Mus musculus receptor-interacting serine-threonine kinase 4 (Ripk4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	DIk; ANKK2; 2310069J12Rik; Ankrd3; PKK; AI552420; RIP4	DIk; ANKK2; 2310069J12Rik; Ankrd3; PKK; AI552420; RIP4
Mus musculus	RefSeq	ILMN_197447	ILMN_197447	LOC218877	XM_138955.2	XM_138955.2			38075892	XM_138955.2	LOC218877		ILMN_1215026	005090102	S	4188	GACAGAGTCTAGGTTTGGCAAGCTCTGGGCAGGGTCCTCTGGGGAAATGG										
Mus musculus	MEEBO	ILMN_196127	ILMN_196127	JEREMYREITER_BGALACTOSIDASE_40	JeremyReiter_bGalactosidase_40						JeremyReiter_bGalactosidase_40		ILMN_1217889	006480047	S	5	GAACAAAAGCTGGGTACCGGGCCCCCCCTCGAGGTCGACGGTATCGATAA										
Mus musculus	RefSeq	ILMN_213879	ILMN_213879	PRG4	XM_355243.5	XM_355243.5		96875	94364303	XM_355243.5	Prg4	XP_355243.4	ILMN_2641731	000940524	S	103	GGGGAAGGGTACTCTAGAGATGCCACCTGCAACTGTGATTATAACTGTCA					PREDICTED: Mus musculus proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) (Prg4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_222952	ILMN_222952	9230101H05RIK	scl36218.5.1_257	NM_177905.2			31342703	NM_177905.2	9230101H05Rik		ILMN_2757170	006480017	S	2049	CCCTAAAATGCCACAGGTACTGTGCTCCCAGGATGGTACTATGGTAGAAT										
Mus musculus	RefSeq	ILMN_201676	ILMN_311241	1810032O08RIK	XR_035342.1	XR_035342.1		66293	149262518	XR_035342.1	1810032O08Rik		ILMN_1230176	006420554	S	349	AGGGCCTTCGGGATGCCTCTATCTGGTTATTGCCCTGTAGTGCCAGAGAG	11	+	116535665-116535689:116536822-116536846	11qE2	PREDICTED: Mus musculus RIKEN cDNA 1810032O08 gene (1810032O08Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_201528	ILMN_311241	1810032O08RIK	XR_035342.1	XR_035342.1		66293	149262518	XR_035342.1	1810032O08Rik		ILMN_2770148	007000735	S	1062	CACTCCCCATCAAATGTGCAGACACATGAGTGTCCTTTACCAATGCTCCA	11	+	116537510-116537559	11qE2	PREDICTED: Mus musculus RIKEN cDNA 1810032O08 gene (1810032O08Rik), misc RNA.					
Mus musculus	MEEBO	ILMN_217648	ILMN_217648	6720469N11RIK	scl21996.1.1532_72	NM_177138.2			31342888	NM_177138.2	6720469N11Rik		ILMN_2685890	004540674	S	2184	GACTGCCAACCCCAGTCATTCCTCGGATTGTTATCTCCATCTGATGCCTG										
Mus musculus	RefSeq	ILMN_252315	ILMN_252315	1700057G04RIK	NM_001033184.1	NM_001033184.1		78459	85701691	NM_001033184.1	1700057G04Rik	NP_001028356.1	ILMN_2903992	007330747	S	435	TGCTGTGGGGCCATTAGACCTTTCACCATGAGGATCTTTGATAACTCAGG	9	+	92154799-92154848	9qE3.3	Mus musculus RIKEN cDNA 1700057G04 gene (1700057G04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221205	ILMN_221205	CHRNA6	NM_021369.2	NM_021369.2		11440	31542394	NM_021369.2	Chrna6	NP_067344.2	ILMN_2732437	000630367	S	2324	GCTCATGGATTTGGAGGACTCTGCCCATGATCACTAGGTCCCATTGCCTC	8	-	28514216-28514265	8qA2	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 6 (Chrna6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Acra6; Nica6	Acra6; Nica6
Mus musculus	RefSeq	ILMN_221205	ILMN_221205	CHRNA6	NM_021369.2	NM_021369.2		11440	31542394	NM_021369.2	Chrna6	NP_067344.2	ILMN_2732438	001190553	S	2328	CATGGATTTGGAGGACTCTGCCCATGATCACTAGGTCCCATTGCCTCTGG	8	-	28514212-28514261	8qA2	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 6 (Chrna6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Acra6; Nica6	Acra6; Nica6
Mus musculus	MEEBO	ILMN_223365	ILMN_223365	GLUD1	scl014661.15_41	NM_008133.2			34328124	NM_008133.2	Glud1		ILMN_2763080	002570368	S	2658	TCGAGTGTCCCAGAAAAAAAGACTTGGGCTCCCTGTTTGGAGTCTGGCAG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IGI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: L-glutamate + H2O + NAD(P)+ = 2-oxoglutarate + NH3 + NAD(P)H + H+ [goid 4353] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212381	ILMN_230695	PRDM2	NM_001081355.1	NM_001081355.1		110593	124486860	NM_001081355.1	Prdm2	NP_001074824.1	ILMN_2707291	006840170	S	8322	CCTCAAAACGCTTGCGTTACACCAGCCCTCGATGCCTTCTTTCATGTGAA	4	-	142718383-142718432	4qE1	Mus musculus PR domain containing 2, with ZNF domain (Prdm2), mRNA.				Riz; 4833427P12Rik; Gm1033; ZNFPR1C1; Riz1; E330024L24Rik	Riz; 4833427P12Rik; Gm1033; ZNFPR1C1; Riz1; E330024L24Rik
Mus musculus	RefSeq	ILMN_212381	ILMN_230695	PRDM2	NM_001081355.1	NM_001081355.1		110593	124486860	NM_001081355.1	Prdm2	NP_001074824.1	ILMN_1250454	001440634	S	8305	CAGATCGGGTGTGCCCACCTCAAAACGCTTGCGTTACACCAGCCCTCGAT	4	-	142718400-142718449	4qE1	Mus musculus PR domain containing 2, with ZNF domain (Prdm2), mRNA.				Riz; 4833427P12Rik; Gm1033; ZNFPR1C1; Riz1; E330024L24Rik	Riz; 4833427P12Rik; Gm1033; ZNFPR1C1; Riz1; E330024L24Rik
Mus musculus	RefSeq	ILMN_199916	ILMN_230695	PRDM2	NM_001081355.1	NM_001081355.1		110593	124486860	NM_001081355.1	Prdm2	NP_001074824.1	ILMN_1241493	003370241	S	255	TACCATCTGCGGTCGACAAGACTCGGATTGGTGTCTGGGCCACTAAACCA	4	-	142769274-142769294:142770780-142770808	4qE1	Mus musculus PR domain containing 2, with ZNF domain (Prdm2), mRNA.				Riz; 4833427P12Rik; Gm1033; ZNFPR1C1; Riz1; E330024L24Rik	Riz; 4833427P12Rik; Gm1033; ZNFPR1C1; Riz1; E330024L24Rik
Mus musculus	RefSeq	ILMN_216051	ILMN_216051	IFI30	NM_023065.3	NM_023065.3		65972	125628656	NM_023065.3	Ifi30	NP_075552.2	ILMN_1228213	004290709	S	440	GGAGGCAGCGTTCCTAACCATCGTCTGTATGGAGGAGATGGATGATATGG	8	-	73288463-73288512	8qB3.3	Mus musculus interferon gamma inducible protein 30 (Ifi30), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction that interconverts reduced sulfide groups and oxidized disulfide bonds in a substrate [goid 15036] [evidence TAS]	IP30; GILT	IP30; GILT
Mus musculus	RefSeq	ILMN_216051	ILMN_216051	IFI30	NM_023065.3	NM_023065.3		65972	125628656	NM_023065.3	Ifi30	NP_075552.2	ILMN_2767918	004730367	S	590	TGAGAATGCCCAGCTCACAGATGCCCTACACCCACCCCACGAGTATGTGC	8	-	73287646-73287695	8qB3.3	Mus musculus interferon gamma inducible protein 30 (Ifi30), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction that interconverts reduced sulfide groups and oxidized disulfide bonds in a substrate [goid 15036] [evidence TAS]	IP30; GILT	IP30; GILT
Mus musculus	RefSeq	ILMN_208666	ILMN_208666	PPP1R3A	NM_080464.2	NM_080464.2		140491	144922614	NM_080464.2	Ppp1r3a	NP_536712.2	ILMN_2588375	000070541	S	6986	TACATCCAATGTTTGTAAATTGCCAGAAAATAAAGTAAGATGTCAATTAC	6	-	14663906-14663955	6qA1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 3A (Ppp1r3a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence TAS]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISO]	GM; MGC124391; RGL; MGC124392; RG1	GM; MGC124391; RGL; MGC124392; RG1
Mus musculus	RefSeq	ILMN_198168	ILMN_248931	LOC672822	XR_004022.1	XR_004022.1		672822	94403789	XR_004022.1	LOC672822		ILMN_1246536	000150735	S	2362	CCCCGTACTGGCATTGTGGATATTCCTATTCTTACTACAGGAATGAGGGC				17qB1	PREDICTED: Mus musculus similar to DNA replication licensing factor MCM4 (CDC21 homolog) (P1-CDC21) (LOC672822), mRNA.					
Mus musculus	Riken	ILMN_207291	ILMN_207291	KNSL5	ri|4632406J10|PX00637G14|AK076271|2992					AK076271	Knsl5		ILMN_1250752	001850037	S	2683	GCCTGCCTGCCCAGTGATGGCCTTAGCTTGTTGCTACCTAGATGCGTGCA										
Mus musculus	RefSeq	ILMN_221605	ILMN_221605	TIAM1	NM_009384.2	NM_009384.2		21844	142372435	NM_009384.2	Tiam1	NP_033410.1	ILMN_2737710	005270452	S	7046	GCAGAGGTGTCGGATAGTCACATTTTCTGGTCTCCCTGCAACACGTCCAT	16	-	89787550-89787599	16qC3.3	Mus musculus T-cell lymphoma invasion and metastasis 1 (Tiam1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]; The series of molecular signals generated as a consequence of an ephrin receptor binding to an ephrin [goid 48013] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence IMP]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA];  [goid 5057] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]; Interacting selectively with an ephrin receptor [goid 46875] [evidence IPI]	D16Ium10; AI847750; D16Ium10e	D16Ium10; AI847750; D16Ium10e
Mus musculus	RefSeq	ILMN_199299	ILMN_314428	LOC100048814	XM_001471620.1	XM_001471620.1		100048814	149253481	XM_001471620.1	LOC100048814	XP_001471670.1	ILMN_1231460	004480524	S	1799	GAGAAAAACGGTCTGAGAAGGCATCAGAGAATTCATACAGGAGAGAAACC	4|NT_166299.1	-	35681-35730		PREDICTED: Mus musculus hypothetical protein LOC100048814 (LOC100048814), mRNA.					
Mus musculus	RefSeq	ILMN_235616	ILMN_235616	ANGEL2	NM_021421.3	NM_021421.3		52477	70794812	NM_021421.3	Angel2	NP_067396.3	ILMN_3160697	001170202	S	2118	CATGCTGCCTTTTCTGGAGACCCAGTTTCATTGGGAGAAGCCTGTGCGTG	1	+	192769298-192769347	1qH6	Mus musculus angel homolog 2 (Drosophila) (Angel2), mRNA.				D1Ertd396e; D1Ertd654e; 2610307I21Rik; 5730410O10Rik; AI845692	D1Ertd396e; D1Ertd654e; 2610307I21Rik; 5730410O10Rik; AI845692
Mus musculus	RefSeq	ILMN_210967	ILMN_210967	2310057J18RIK	NM_026336.1	NM_026336.1		67719	13385839	NM_026336.1	2310057J18Rik	NP_080612.1	ILMN_2940678	003400224	S	805	GGCCTGCCCCCACGAGTCCTTGTTGATACTGACATAGCCCCTTTTATTCC	10	-	28663335-28663384	10qA4	Mus musculus RIKEN cDNA 2310057J18 gene (2310057J18Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			2210414P04Rik	2210414P04Rik
Mus musculus	RefSeq	ILMN_215726	ILMN_215726	NMBR	NM_008703.2	NM_008703.2		18101	118130681	NM_008703.2	Nmbr	NP_032729.1	ILMN_2662901	001740044	S	990	CTTTAGGAAGCACTTCAACAGCCAGCTCTGTTGTGGGCGGAAGTCCTATC	10	+	14490179-14490228	10qA2	Mus musculus neuromedin B receptor (Nmbr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with bombesin to initiate a change in cell activity [goid 4946] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214976	ILMN_251791	OLFR1039	NM_001011784.1	NM_001011784.1		257950	58801337	NM_001011784.1	Olfr1039	NP_001011784.1	ILMN_1242316	002140187	S	859	CCGCTGATCTATAGTTTGAGAAATAAGGAGGTTAAAAATGCCCTGAAGCG	2	-	85970910-85970959	2qD	Mus musculus olfactory receptor 1039 (Olfr1039), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr1517; MOR185-9P; MOR185-5	Olfr1517; MOR185-9P; MOR185-5
Mus musculus	MEEBO	ILMN_189217	ILMN_189217	5730422E09RIK	scl070543.1_134						5730422E09Rik		ILMN_1233191	004480687	S	8	CAAGTAAGATTTCTTTTTGTATGGATTATGAGGTTTTTGAGAAAGTATTT										
Mus musculus	RefSeq	ILMN_223851	ILMN_233033	RRAGC	NM_017475.2	NM_017475.2		54170	114145486	NM_017475.2	Rragc	NP_059503.2	ILMN_2770414	005900224	S	2387	CCACTGGGCCCCTTGAGTGCGTCAGTGCAGCTGGTGAGTGAAATGTACTC	4	+	123614021-123614070	4qD2.2	Mus musculus Ras-related GTP binding C (Rragc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISS]	YGR163W; MGC47404; Gtr2; TIB929; RAGC; AU041672	YGR163W; MGC47404; Gtr2; TIB929; RAGC; AU041672
Mus musculus	RefSeq	ILMN_197260	ILMN_197260	LOC269283	XM_195160.3	XM_195160.3			38074856	XM_195160.3	LOC269283		ILMN_1240057	002370477	S	906	TGTTGCTGCACTCTCCCAGGGACTCAAACCGAAGACACCCTCACACCTGA										
Mus musculus	RefSeq	ILMN_190180	ILMN_260853	SNORA69	NR_002900.1	NR_002900.1		104369	86604690	NR_002900.1	Snora69		ILMN_2467877	001230563	S	26	GGAGTACTGCCATTATCCTGCTGAAAGAAAAGCCATGTTGGTTGTTTCTG	X	-	33514403-33514452		Mus musculus small nucleolar RNA, H/ACA box 69 (Snora69), non-coding RNA.	A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		MBI-134; Rnu69	MBI-134; Rnu69
Mus musculus	RefSeq	ILMN_210209	ILMN_210209	LRRCC1	NM_028915.2	NM_028915.2		71710	142365220	NM_028915.2	Lrrcc1	NP_083191.1	ILMN_2699571	007200161	S	3234	GCTGATGACAGTTGCACAGCTCTATATATTACAACCTACAAAGACTGAAA	3	+	14572533-14572582	3qA1	Mus musculus leucine rich repeat and coiled-coil domain containing 1 (Lrrcc1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC106275; AI447421; AI195358; 1200008A14Rik; 4932441F23Rik	MGC106275; AI447421; AI195358; 1200008A14Rik; 4932441F23Rik
Mus musculus	RefSeq	ILMN_210209	ILMN_210209	LRRCC1	NM_028915.2	NM_028915.2		71710	142365220	NM_028915.2	Lrrcc1	NP_083191.1	ILMN_2603279	004180452	S	347	GTCATCTAATCAAATAAGTCAAATTGAAGGCCTGAACACACTGACAAAGC	3	+	14536110-14536159	3qA1	Mus musculus leucine rich repeat and coiled-coil domain containing 1 (Lrrcc1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC106275; AI447421; AI195358; 1200008A14Rik; 4932441F23Rik	MGC106275; AI447421; AI195358; 1200008A14Rik; 4932441F23Rik
Mus musculus	RefSeq	ILMN_210245	ILMN_210245	B230312A22RIK	NM_172691.2	NM_172691.2		230088	141803417	NM_172691.2	B230312A22Rik	NP_766279.1	ILMN_2603662	006040286	S	2481	CTCGGCTTTCTCTATTCCTTTTCCCTTTCCTGCCCTTCAACCCATCTTCG	4	-	43045912-43045961	4qA5	Mus musculus RIKEN cDNA B230312A22 gene (B230312A22Rik), mRNA.				KIAA1539; RP23-124L1.9; mKIAA1539	KIAA1539; RP23-124L1.9; mKIAA1539
Mus musculus	RefSeq	ILMN_220689	ILMN_220689	TNFAIP8L1	NM_025566.2	NM_025566.2		66443	31560243	NM_025566.2	Tnfaip8l1	NP_079842.2	ILMN_2780552	005490053	S	2038	GTCGACCCCTGAGATCTGTGAAGATCGAGTCTGTGGAGGGGCTGGCACAG	17	+	56313134-56313183	17qD	Mus musculus tumor necrosis factor, alpha-induced protein 8-like 1 (Tnfaip8l1), mRNA.				2600017J23Rik	2600017J23Rik
Mus musculus	RefSeq	ILMN_220689	ILMN_220689	TNFAIP8L1	NM_025566.2	NM_025566.2		66443	31560243	NM_025566.2	Tnfaip8l1	NP_079842.2	ILMN_2780550	003290520	S	2187	AAGGCAATGTGTACAACCTGGAGCCTGTGGTGACGGGTGGGAGTCACTGC	17	+	56313283-56313332	17qD	Mus musculus tumor necrosis factor, alpha-induced protein 8-like 1 (Tnfaip8l1), mRNA.				2600017J23Rik	2600017J23Rik
Mus musculus	Riken	ILMN_206448	ILMN_206448	EXT2	ri|C230064K14|PX00176K19|AK082572|3723					AK082572	Ext2		ILMN_1222215	002030603	S	3396	CGATAAGCAAACCTCGGTGGTCATGTGGTCCTTTCAGCAGGGATTGTGGC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence IEA]; Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50509] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + heparan sulfate = UDP + (N-acetyl-D-glucosaminyl)-heparan sulfate [goid 42328] [evidence IC ]		
Mus musculus	RefSeq	ILMN_217402	ILMN_253741	DNMT3A	NM_007872.4	NM_007872.4		13435	114145580	NM_007872.4	Dnmt3a	NP_031898.1	ILMN_1224446	004070709	S	3245	GAGTTTTCAATGTTAACCTTCAGTCCTATCTAAAAAGCAAAATAGGCCCC	12	+	3908094-3908143	12qA1.1	Mus musculus DNA methyltransferase 3A (Dnmt3a), transcript variant 1, mRNA.	A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IDA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IGI]; Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence TAS]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IGI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	W91664; AU015806	W91664; AU015806
Mus musculus	RefSeq	ILMN_217402	ILMN_253741	DNMT3A	NM_007872.4	NM_007872.4		13435	114145580	NM_007872.4	Dnmt3a	NP_031898.1	ILMN_1259562	006860524	S	9683	TTATTTTCGCTATAAATAGAGCTTCAATAAACATCTTTATGTTTTGGCTT				12qA1.1	Mus musculus DNA methyltransferase 3A (Dnmt3a), transcript variant 1, mRNA.	A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IDA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IGI]; Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence TAS]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IGI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	W91664; AU015806	W91664; AU015806
Mus musculus	Riken	ILMN_206217	ILMN_206217	C130086K02RIK	ri|C130086K02|PX00172C15|AK081911|1925					AK081911	C130086K02Rik		ILMN_1239684	006580333	S	1785	GTCGGCTTGCACCGATTGCTTCTCCGTGCACTTCTGATATTTGCACAGTC										
Mus musculus	RefSeq	ILMN_214734	ILMN_238841	TNKS2	XM_917270.3	XM_917270.3		74493	149270766	XM_917270.3	Tnks2	XP_922363.1	ILMN_1221470	001260253	S	5524	GCAATGTTTATTGGGAGCTGGGAGTTTGGGGGTGTGGTTTAGTGCTTTGC				19qC2	PREDICTED: Mus musculus tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2, transcript variant 8 (Tnks2), mRNA.		Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence ISS]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]	Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]		
Mus musculus	Riken	ILMN_202475	ILMN_202475	6230401I02RIK	ri|6230401I02|PX00041P22|AK018078|1668					AK018078	6230401I02Rik		ILMN_2549903	004640685	S	1169	CTTCTTAGGAGCCTGCGTATATTGTTTACTGGCAGGTGGCATCCACGGCG										
Mus musculus	RefSeq	ILMN_198336	ILMN_198336	LOC225609	XM_148839.2	XM_148839.2			28524514	XM_148839.2	LOC225609		ILMN_1223337	002630487	S	627	CCATCCTCAGACAAGCTGCCAGTCACTTCGCCATCACCTTGGCAACCGTG										
Mus musculus	RefSeq	ILMN_240053	ILMN_240053	D930049A15RIK	NM_001033402.1	NM_001033402.1		328364	85701906	NM_001033402.1	D930049A15Rik	NP_001028574.1	ILMN_2904947	003400575	S	2315	CTAGGAGCGTGTGCAGCGAGGAGTGCAGTTAGAGGGAGATGGTGTTGTCC	14	+	24295255-24295304	14qA3	Mus musculus RIKEN cDNA D930049A15 gene (D930049A15Rik), mRNA.				C130026E14	C130026E14
Mus musculus	MEEBO	ILMN_191758	ILMN_191758	CPEB2	scl27864.15_173				31341662	NM_175937	Cpeb2		ILMN_1236346	003800022	S	20	GTCTGTTGTACTGGTAATTTAACTCTGTAATGGAATAGTTTGCTGCCAAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any stretch of pyrimidines (cytosine or uracil) in an RNA molecule [goid 8187] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211647	ILMN_211647	MAOB	NM_172778.1	NM_172778.1		109731	27370153	NM_172778.1	Maob	NP_766366.1	ILMN_1258219	006520324	S	303	GGCCAAAGAGCTAGGATTGGAGACCTATAAAGTTAATGAAGTTGAGCGGC	X	-	16345519-16345568	XqA1.2	Mus musculus monoamine oxidase B (Maob), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]	6330414K01Rik	6330414K01Rik
Mus musculus	RefSeq	ILMN_211647	ILMN_211647	MAOB	NM_172778.1	NM_172778.1		109731	27370153	NM_172778.1	Maob	NP_766366.1	ILMN_2719069	003310309	S	1846	CCCTTGCTATCTCACAACCTACCTGCCCCATGTACACAGGGTTTTTCAAA	X	-	16286921-16286970	XqA1.2	Mus musculus monoamine oxidase B (Maob), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]	6330414K01Rik	6330414K01Rik
Mus musculus	RefSeq	ILMN_223928	ILMN_256781	PPIL2	NM_144954.2	NM_144954.2		66053	118131059	NM_144954.2	Ppil2	NP_659203.1	ILMN_2771686	005670286	S	1747	AGGGCTGACAGCTTTGGCTAGGAGACAGGGAGGCCAAGGCGCTCTGTTTG	16	-	17087042-17087091	16qA3	Mus musculus peptidylprolyl isomerase (cyclophilin)-like 2 (Ppil2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence ISO]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISO]; Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [evidence ISO]	4930511F14Rik; AA589416; 4921520K19Rik; 1700016N17Rik; C130078A06Rik; 0610009L05Rik	4930511F14Rik; AA589416; 4921520K19Rik; 1700016N17Rik; C130078A06Rik; 0610009L05Rik
Mus musculus	MEEBO	ILMN_221849	ILMN_221849	IL17F	scl16953.2.1_157	NM_145856.1			22003915	NM_145856.1	Il17f		ILMN_2741201	002000414	S	392	CAGGTTGGAGAAGATGCTCCTAAAAGTTGGCTGCACCTGTGTCAAGCCCA							Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]			
Mus musculus	RefSeq	ILMN_223963	ILMN_231150	ASPH	NM_133723.2	NM_133723.2		65973	125628653	NM_133723.2	Asph	NP_598484.2	ILMN_1259678	004070307	S	1250	TGTCCAGGTTGAGCTCGTGCCTCACACCTTATCTCCTACCTTCCTGTCCC	4	-	9548518-9548567	4qA1	Mus musculus aspartate-beta-hydroxylase (Asph), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The alteration of an amino acid residue in a peptide [goid 18193] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690	BAH; AI848629; cI-37; 2310005F16Rik; 3110001L23Rik; AW561901; C79816; AW261690
Mus musculus	RefSeq	ILMN_219926	ILMN_219926	OLFR178	NM_146997.2	NM_146997.2		258999	148228033	NM_146997.2	Olfr178	NP_667208.2	ILMN_1255012	002470463	S	906	AGTTATGAAGATCTATACCATTTTTAAAAGGTCTTCAGCTTCTGCAGCTC				16qC1.2	Mus musculus olfactory receptor 178 (Olfr178), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR184-6	MOR184-6
Mus musculus	RefSeq	ILMN_205085	ILMN_215606	DDX10	XM_284494.5	XM_284494.5		77591	94386109	XM_284494.5	Ddx10	XP_284494.3	ILMN_1232189	000840193	S	1454	CAGCTGTGAATTGGGTCCTTCAGTTTGATTGTCCAGAGGATGCCAACACG	9	-	53031793-53031842	9qA5.3	PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 (Ddx10), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210397	ILMN_210397	SLC6A8	NM_133987.1	NM_133987.1		102857	19527207	NM_133987.1	Slc6a8	NP_598748.1	ILMN_2605212	006350086	S	3771	CGTGTAGCAGCTTAAACCCACATCTGTGTCCCATCAAGCCTGAAACAGCC	X	+	70925203-70925218:70925258-70925291	XqA7.3	Mus musculus solute carrier family 6 (neurotransmitter transporter, creatine), member 8 (Slc6a8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of creatine into, out of, within or between cells. Creatine is a compound synthesized from the amino acids arginine, glycine, and methionine that occurs in muscle [goid 15881] [evidence ISS]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: creatine(out) + Na+(out) = creatine(in) + Na+(in) [goid 5309] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the directed movement of creatine into, out of, within or between cells. Creatine is a compound synthesized from the amino acids arginine, glycine, and methionine that occurs in muscle [goid 5308] [evidence ISS]	Creat; AA589632; CT1; CRTR; CRT	Creat; AA589632; CT1; CRTR; CRT
Mus musculus	RefSeq	ILMN_188306	ILMN_316767	1700085B13RIK	XM_001474173.1	XM_001474173.1		76721	149257076	XM_001474173.1	1700085B13Rik	XP_001474223.1	ILMN_2451556	006550746	S	113	TTGGACCTACGGACCCGCAGGGGGCAGTCTCGCGCCGGTCTAACTCAGTA	7	+	29216682-29216731	7qA3	PREDICTED: Mus musculus RIKEN cDNA 1700085B13 gene (1700085B13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212455	ILMN_253676	SFRS10	NM_009186.4	NM_009186.4		20462	145966756	NM_009186.4	Sfrs10	NP_033212.1	ILMN_2738865	002600102	S	265	CGCTCCAAGGAAGACTCAAGGCGTTCTAGATCAAAGTCCAGGTCCAGGTC				16qB1	Mus musculus splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila) (Sfrs10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	TRA2beta; Silg41; SIG-41; TRA2B; 5730405G21Rik; MGC102169; D16Ertd266e	TRA2beta; Silg41; SIG-41; TRA2B; 5730405G21Rik; MGC102169; D16Ertd266e
Mus musculus	RefSeq	ILMN_212455	ILMN_253676	SFRS10	NM_009186.4	NM_009186.4		20462	145966756	NM_009186.4	Sfrs10	NP_033212.1	ILMN_2703529	005290019	S	2077	CAATATTGTTCTTGCTTCAAGATAACATTAAATCTATTTCTCAAATATAT				16qB1	Mus musculus splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila) (Sfrs10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	TRA2beta; Silg41; SIG-41; TRA2B; 5730405G21Rik; MGC102169; D16Ertd266e	TRA2beta; Silg41; SIG-41; TRA2B; 5730405G21Rik; MGC102169; D16Ertd266e
Mus musculus	Riken	ILMN_203145	ILMN_203145	LSP1	ri|6030456M18|PX00057P22|AK031587|2667					AK031587	Lsp1		ILMN_1219338	003400132	S	2412	GCTTGCTCAGCCTAACACCCTGAGTTTGATGCCCAGGACCCACATGGTGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence TAS]	Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]		
Mus musculus	Riken	ILMN_206713	ILMN_206713	A530038O16RIK	ri|A530038O16|PX00141E11|AK079979|2187					AK079979	A530038O16Rik		ILMN_1238814	005910669	S	1860	CACGTCAGTCACTTCACAGCCCTGAGCTGATGATCTCTCAGCCTAGCTCC										
Mus musculus	RefSeq	ILMN_214968	ILMN_311663	ZUBR1	XM_001479450.1	XM_001479450.1		69116	149253186	XM_001479450.1	Zubr1	XP_001479500.1	ILMN_1226294	002320519	S	13702	GGTGCTAAGCATCATGGAGATCATTCTAGATGAATCCAACGCAGAGCCCC	4	+	139027703-139027752	4qD3	PREDICTED: Mus musculus zinc finger, UBR1 type 1, transcript variant 1 (Zubr1), mRNA.					
Mus musculus	RefSeq	ILMN_214968	ILMN_311663	ZUBR1	XM_001479450.1	XM_001479450.1		69116	149253186	XM_001479450.1	Zubr1	XP_001479500.1	ILMN_1222599	001940392	S	9915	CTGTCCTGTACTTCCTCCTGCAAGTGAGTTTCCTGGTAGATGAGGGGGTG	4	+	139007643-139007692	4qD3	PREDICTED: Mus musculus zinc finger, UBR1 type 1, transcript variant 1 (Zubr1), mRNA.					
Mus musculus	RefSeq	ILMN_213634	ILMN_213634	COPS4	NM_012001.1	NM_012001.1		26891	6753489	NM_012001.1	Cops4	NP_036131.1	ILMN_2729985	007050221	S	471	TGGAGACTTACCTGAAGATTGCAAGGCTATACCTGGAGGATGACGATCCC	5	+	100962300-100962349	5qE4	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana) (Cops4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC151203; MGC151177; AW208976; D5Ertd774e	MGC151203; MGC151177; AW208976; D5Ertd774e
Mus musculus	RefSeq	ILMN_213634	ILMN_213634	COPS4	NM_012001.1	NM_012001.1		26891	6753489	NM_012001.1	Cops4	NP_036131.1	ILMN_1215493	005960196	S	1416	TAGCTCCCGTGAGATCTGGGTCTGTGTATTGAACTAACTCAGACGCTTTG	5	+	100976630-100976679	5qE4	Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana) (Cops4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC151203; MGC151177; AW208976; D5Ertd774e	MGC151203; MGC151177; AW208976; D5Ertd774e
Mus musculus	RefSeq	ILMN_212843	ILMN_212843	NT5C2	NM_029810.3	NM_029810.3		76952	141802147	NM_029810.3	Nt5c2	NP_084086.2	ILMN_2630939	000870433	S	101	GCCTGCTAACATGGATAAGCATGCCTTGAAAAAGTACCGTCGAGAAGCCT	19	-	47025342-47025391	19qC3	Mus musculus 5'-nucleotidase, cytosolic II (Nt5c2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]	cN-II; 2010002I23Rik; NT5B; PNT5; GMP	cN-II; 2010002I23Rik; NT5B; PNT5; GMP
Mus musculus	RefSeq	ILMN_212843	ILMN_212843	NT5C2	NM_029810.3	NM_029810.3		76952	141802147	NM_029810.3	Nt5c2	NP_084086.2	ILMN_2674822	005690152	S	2444	CTGAAGAGTACAGAGGAGCAAGTTCCCAGAGCAGCAGCCACGGCATCGTG	19	-	46962553-46962602	19qC3	Mus musculus 5'-nucleotidase, cytosolic II (Nt5c2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]	cN-II; 2010002I23Rik; NT5B; PNT5; GMP	cN-II; 2010002I23Rik; NT5B; PNT5; GMP
Mus musculus	RefSeq	ILMN_197424	ILMN_197424	LOC380888	XM_354797.1	XM_354797.1			38075702	XM_354797.1	LOC380888		ILMN_1256871	003060204	S	584	GCTCGTAGACTAGCACACTCCAACATAAGGCCACATTGATCCAGCGATCC										
Mus musculus	MEEBO	ILMN_217442	ILMN_217442	3830406C13RIK	scl000372.1_1017	NM_178141.1			30025021	NM_178141.1	3830406C13Rik		ILMN_2683283	004230369	S	2006	CAGGAACACGAGGAAGGGCTCTTTTTAAACATCCAGTCTCCCAGCATATG										
Mus musculus	RefSeq	ILMN_210560	ILMN_210560	LIPG	NM_010720.2	NM_010720.2		16891	31543122	NM_010720.2	Lipg	NP_034850.2	ILMN_2606841	001940307	S	3530	ACAAATCTATGGTTAGTTTTTACTTTAAGATTAACCGATTTCAAGATTTA	18	-	75099026-75099075	18qE2	Mus musculus lipase, endothelial (Lipg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 50746] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate [goid 4465] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 2-acylglycerophosphocholine + a carboxylate [goid 8970] [evidence ISO]	EL; mEDL; 3110013K01Rik	EL; mEDL; 3110013K01Rik
Mus musculus	RefSeq	ILMN_215808	ILMN_215808	FYN	NM_008054.1	NM_008054.1		14360	6679878	NM_008054.1	Fyn	NP_032080.1	ILMN_2912082	006960494	S	2860	TGCAACTAAAATTATGGGAAGGCTAAGGGTGGGGGGTTGGTACACGTCCC	10	+	39284807-39284856	10qB1	Mus musculus Fyn proto-oncogene (Fyn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IGI]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of tubulin, including microtubules [goid 15631] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI448320; AW552119; MGC115870	AI448320; AW552119; MGC115870
Mus musculus	RefSeq	ILMN_215808	ILMN_215808	FYN	NM_008054.1	NM_008054.1		14360	6679878	NM_008054.1	Fyn	NP_032080.1	ILMN_2751207	005810291	S	994	GGCTAAAGATGCTTGGGAAGTTGCACGTGACTCGTTGTTTCTGGAGAAGA	10	+	39249795-39249844	10qB1	Mus musculus Fyn proto-oncogene (Fyn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IGI]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of tubulin, including microtubules [goid 15631] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI448320; AW552119; MGC115870	AI448320; AW552119; MGC115870
Mus musculus	RefSeq	ILMN_215808	ILMN_215808	FYN	NM_008054.1	NM_008054.1		14360	6679878	NM_008054.1	Fyn	NP_032080.1	ILMN_2663821	005220152	S	3183	TTTAAATTGTTTAACTTTCCTAATTTAGTAATTAAAAAGAGAGCATTTTA	10	+	39285130-39285179	10qB1	Mus musculus Fyn proto-oncogene (Fyn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IGI]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of tubulin, including microtubules [goid 15631] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI448320; AW552119; MGC115870	AI448320; AW552119; MGC115870
Mus musculus	RefSeq	ILMN_212194	ILMN_243242	GJD4	NM_153086.5	NM_153086.5		225152	146149330	NM_153086.5	Gjd4	NP_694726.2	ILMN_2770767	004010301	S	1538	ATCTAATCACTTTTATTGAACTGTTTGATTAAGAAAAACCTCCCTCTGCA				18qA1	Mus musculus gap junction protein, delta 4 (Gjd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]		Cx39; connexin 39	Cx39; connexin 39
Mus musculus	RefSeq	ILMN_212194	ILMN_243242	GJD4	NM_153086.5	NM_153086.5		225152	146149330	NM_153086.5	Gjd4	NP_694726.2	ILMN_1243047	004610161	S	2509	TCAATGCTCTCAAATACCCCTTCTCTCTCTCCAAGTGAAGGCTGGTTCTT				18qA1	Mus musculus gap junction protein, delta 4 (Gjd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]		Cx39; connexin 39	Cx39; connexin 39
Mus musculus	RefSeq	ILMN_217521	ILMN_217521	TLR4	NM_021297.2	NM_021297.2		21898	118130391	NM_021297.2	Tlr4	NP_067272.1	ILMN_2690004	002470053	S	228	AAGCTATAGCTTCTCCAATTTTTCAGAACTTCAGTGGCTGGATTTATCCA	4	+	66494933-66494982	4qC1	Mus musculus toll-like receptor 4 (Tlr4), mRNA.	Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence NAS]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-13 [goid 45368] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-1 [goid 45362] [evidence NAS]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; The synthesis or release of nitric oxide following a stimulus during an acute inflammatory response, resulting in an increase in its intracellular or extracellular levels [goid 2537] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IGI]; The appearance of interferon-gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon-gamma is also known as type II interferon [goid 32609] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ly87; Rasl2-8; Lps; Ran/M1	Ly87; Rasl2-8; Lps; Ran/M1
Mus musculus	RefSeq	ILMN_217521	ILMN_217521	TLR4	NM_021297.2	NM_021297.2		21898	118130391	NM_021297.2	Tlr4	NP_067272.1	ILMN_2752966	000130086	S	2636	CTAAGCTATAGCATGGACCTTACCGGGCAGAAGGAAGTAGCACTGACACC	4	+	66502342-66502391	4qC1	Mus musculus toll-like receptor 4 (Tlr4), mRNA.	Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence NAS]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-13 [goid 45368] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-1 [goid 45362] [evidence NAS]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; The synthesis or release of nitric oxide following a stimulus during an acute inflammatory response, resulting in an increase in its intracellular or extracellular levels [goid 2537] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IGI]; The appearance of interferon-gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon-gamma is also known as type II interferon [goid 32609] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ly87; Rasl2-8; Lps; Ran/M1	Ly87; Rasl2-8; Lps; Ran/M1
Mus musculus	RefSeq	ILMN_219162	ILMN_228906	THSD4	NM_001040426.2	NM_001040426.2		207596	142351523	NM_001040426.2	Thsd4	NP_001035516.1	ILMN_1235124	001770086	S	5794	CCACCTTCTTCTTGGGCCTCTTCACATTCCCTTCATTGGCTGTGGTTTGG	9	-	59817690-59817739	9qB	Mus musculus thrombospondin, type I, domain containing 4 (Thsd4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	B230114P05Rik; AI585901	B230114P05Rik; AI585901
Mus musculus	RefSeq	ILMN_211040	ILMN_211040	RAD9B	NM_144912.3	NM_144912.3		231724	118130068	NM_144912.3	Rad9b	NP_659161.2	ILMN_1225080	005220445	S	1506	GACAGCAGGCATTCCAGTGTATGTGATGGCCTGACAGGTTTTGTTCAGAG	5	-	122775554-122775603	5qF	Mus musculus RAD9 homolog B (S. cerevisiae) (Rad9b), mRNA.		The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	MGC28469; BC021784; A630082N15Rik	MGC28469; BC021784; A630082N15Rik
Mus musculus	RefSeq	ILMN_222848	ILMN_222848	SPIN4	NM_178753.3	NM_178753.3		270624	142364187	NM_178753.3	Spin4	NP_848868.1	ILMN_2755717	006060333	S	3848	GCCCAGTTCAGAAAATGTAATAAATTCATCAGCTATAATGGTAGTATAAT	X	-	92218124-92218173	XqC3	Mus musculus spindlin family, member 4 (Spin4), mRNA.		The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]		RP23-230K20.2; 9630042H07Rik	RP23-230K20.2; 9630042H07Rik
Mus musculus	RefSeq	ILMN_261056	ILMN_261056	ASAP3	NM_001008232.1	NM_001008232.1		230837	56711263	NM_001008232.1	Asap3	NP_001008233.1	ILMN_3000369	005720129	S	3741	CAAGCCGAACAGGGGAGGCCAGAGGGCACCAAGTGAGTAGCCAGCAGTGT	4	+	135800706-135800755	4qD3	Mus musculus ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 (Asap3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	Gm140; 9430088F20Rik; MGC102639; UPLC1	Gm140; 9430088F20Rik; MGC102639; UPLC1
Mus musculus	RefSeq	ILMN_196459	ILMN_261056	ASAP3	NM_001008232.1	NM_001008232.1		230837	56711263	NM_001008232.1	Asap3	NP_001008233.1	ILMN_1222403	004640309	S	2740	GGCACATTCCGGTTGGCCTCGTGGAAGGAGATGGCTCAAAGATCGGGGTT	4	+	135799705-135799754	4qD3	Mus musculus ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 (Asap3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	Gm140; 9430088F20Rik; MGC102639; UPLC1	Gm140; 9430088F20Rik; MGC102639; UPLC1
Mus musculus	RefSeq	ILMN_190997	ILMN_239626	WASF2	NM_153423.5	NM_153423.5		242687	146149278	NM_153423.5	Wasf2	NP_700472.1	ILMN_2495363	001240270	S	3882	GTTCTCATCCTACAGCTGGTTTGGTAATGATCTGCAAGTCCCGGAGAGCA				4qD2.3	Mus musculus WAS protein family, member 2 (Wasf2), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISA]	Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IMP]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cell wall [goid 5199] [evidence IEA]	WAVE2; D4Ertd13e; AW742646	WAVE2; D4Ertd13e; AW742646
Mus musculus	RefSeq	ILMN_247536	ILMN_247536	CCHCR1	NM_146248.1	NM_146248.1		240084	22122830	NM_146248.1	Cchcr1	NP_666360.1	ILMN_2929518	003180039	S	2420	GGAATCTGTGAAAGGCTCCCTGACCGTCCTGCTTGATAACCTGCAAGGCC	17	+	35667490-35667503:35667646-35667681	17qB1	Mus musculus coiled-coil alpha-helical rod protein 1 (Cchcr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC28303; Hcr	MGC28303; Hcr
Mus musculus	RefSeq	ILMN_214869	ILMN_247536	CCHCR1	NM_146248.1	NM_146248.1		240084	22122830	NM_146248.1	Cchcr1	NP_666360.1	ILMN_2652882	005220195	S	2477	GGCCATTTCCAGAGATGAAGATATTTGTGTGGAAGATAACCAGAACACCA	17	+	35667689-35667738	17qB1	Mus musculus coiled-coil alpha-helical rod protein 1 (Cchcr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC28303; Hcr	MGC28303; Hcr
Mus musculus	RefSeq	ILMN_217909	ILMN_217909	NR2E1	NM_152229.2	NM_152229.2		21907	133892952	NM_152229.2	Nr2e1	NP_689415.1	ILMN_2689177	007320494	S	3101	CCCGAGGGGGGAAATTCAGCACTGGCTTAGCATAGGATGAGTCAAACTTC	10	-	42281859-42281908	10qB2	Mus musculus nuclear receptor subfamily 2, group E, member 1 (Nr2e1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal process is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum [goid 21960] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex [goid 21772] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The orderly movement of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system [goid 8347] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mtll; TLL; fierce; Tlx; Mtl1; XTLL; frc	Mtll; TLL; fierce; Tlx; Mtl1; XTLL; frc
Mus musculus	RefSeq	ILMN_191561	ILMN_191561	UBE2Q1	NM_027315.2	NM_027315.2		70093	31541871	NM_027315.2	Ube2q1	NP_081591.2	ILMN_2520380	001660041	S	20	ATCTCCCCTCCCGGGGATCGGTGCCGGGGGACCCCGTCCGCATCCACTGC	3	+	89859562-89859611	3qF1	Mus musculus ubiquitin-conjugating enzyme E2Q (putative) 1 (Ube2q1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	AI854014; NICE-5; 2310012M18Rik; PRO3094; Ube2q; 1110002C01Rik	AI854014; NICE-5; 2310012M18Rik; PRO3094; Ube2q; 1110002C01Rik
Mus musculus	RefSeq	ILMN_217351	ILMN_248202	RPL34	NM_026724.1	NM_026724.1		68436	55742884	NM_026724.1	Rpl34	NP_081000.1	ILMN_2682218	005900504	S	395	ACTGTCTAAGACACAGAAGCACGTCAGCAGGGCCTATGGCGGCTCCATGT	3	-	130431687-130431736	3qG3	Mus musculus ribosomal protein L34 (Rpl34), transcript variant 1, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1100001I22Rik; RPL34; MGC103270	1100001I22Rik; RPL34; MGC103270
Mus musculus	Riken	ILMN_204751	ILMN_204751	B930045J24RIK	ri|B930045J24|PX00164F01|AK047284|2874					AK047284	B930045J24Rik		ILMN_2567349	007570142	S	2730	CAGCCAAGAGCTGATGAGACTGAGAAAGAGTGCTGAGCTGCCAACTCCCC										
Mus musculus	MEEBO	ILMN_210712	ILMN_210712	LAMC2	scl0016782.1_264	NM_008485.2			19115955	NM_008485.2	Lamc2		ILMN_1233962	003850554	S	5022	AATTGCTGAAGGAACCAGAGGCATTGGGACCTCAGTTTGGAAGACTACTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]		
Mus musculus	RefSeq	ILMN_219247	ILMN_219247	KLHDC3	NM_027910.1	NM_027910.1		71765	17017964	NM_027910.1	Klhdc3	NP_082186.1	ILMN_2851023	004050452	S	1845	CAGGCTGTGTGTGCTGGAAAGGGACAGGAGTGGGAGAAGCCAGCAGTGTT	17	-	46137946-46137995	17qC	Mus musculus kelch domain containing 3 (Klhdc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]		1300011D16Rik; Peas	1300011D16Rik; Peas
Mus musculus	MEEBO	ILMN_211572	ILMN_211572	D430007I03	scl0231989.3_270				51711977	XM_489136	D430007I03		ILMN_1233660	004860082	S	1169	GGGTCACTTCAAATTCTTAGTTCTCCACAGGATTGTATTACCTAAGATAG										
Mus musculus	RefSeq	ILMN_213746	ILMN_213746	TMEM110	NM_028839.3	NM_028839.3		69179	141802607	NM_028839.3	Tmem110	NP_083115.2	ILMN_2640348	003370246	S	3432	TCCAAGTTGCCTTATGAGGTGGGACCCTTTACTGGCTGATTGCGGGCGAC	14	+	31690112-31690161	14qB	Mus musculus transmembrane protein 110 (Tmem110), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2310014H19Rik; 1810038N08Rik; AW554125	2310014H19Rik; 1810038N08Rik; AW554125
Mus musculus	Riken	ILMN_207370	ILMN_207370	C130082I06RIK	ri|C130082I06|PX00666P13|AK081854|2939					AK081854	C130082I06Rik		ILMN_1223771	007040092	S	2561	GGGTGAGTGACTGCTGCTTCCAAAGCTTCCCTTTGGCTTCTCAGACTTCA										
Mus musculus	Riken	ILMN_204021	ILMN_204021	NDRP	ri|A630078H11|PX00147L11|AK042284|1630					AK042284	Ndrp		ILMN_2561766	005960288	S	507	CAAACAGTTGCTTTCCATACGTGGAGCTGACACGAGTATGGTGAATGGTG										
Mus musculus	RefSeq	ILMN_190041	ILMN_257760	LOC630393	XM_903829.2	XM_903829.2		630393	94372751	XM_903829.2	LOC630393	XP_908922.1	ILMN_1230924	005360097	S	75	GAAGAAGCTGAAGGGGAGGATGACCCAATATGAACACCACCAGCCTCACC					PREDICTED: Mus musculus similar to PRAME family member DJ1198H6.2, transcript variant 3 (LOC630393), mRNA.					
Mus musculus	RefSeq	ILMN_221102	ILMN_221102	EVX1	NM_007966.3	NM_007966.3		14028	145966690	NM_007966.3	Evx1	NP_031992.1	ILMN_2731113	001500066	S	2651	GGGAGCCACTTAGGAACTCCTGTACTCATCCTTATAGCCAGTGTTTGAGG				6qB3	Mus musculus even skipped homeotic gene 1 homolog (Evx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in the commitment of a cell to become an interneuron in the ventral spinal cord [goid 21913] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Evx-1	Evx-1
Mus musculus	RefSeq	ILMN_209941	ILMN_209941	PFDN1	NM_026027.3	NM_026027.3		67199	146134928	NM_026027.3	Pfdn1	NP_080303.1	ILMN_2600643	001660356	S	780	GGAAGAAGACGACAAGTTGATAGGTGTGGTGGACAGAGGCACAGTTGGCT				18qB2	Mus musculus prefoldin 1 (Pfdn1), mRNA.	A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	2700086I23Rik; AA408327; AU044714	2700086I23Rik; AA408327; AU044714
Mus musculus	RefSeq	ILMN_219728	ILMN_219728	ADAM21	NM_020330.4	NM_020330.4		56622	141803337	NM_020330.4	Adam21	NP_065063.1	ILMN_1221608	000650338	S	2646	ATTGTAAAATACCTTCTGGTCCCAAAGAGACTAAGGCCTCTTCACCAGGT	12	-	82659786-82659835	12qD1	Mus musculus a disintegrin and metallopeptidase domain 21 (Adam21), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Adam31	Adam31
Mus musculus	MEEBO	ILMN_194512	ILMN_194512	1700073K01RIK	scl0319411.1_316				31541840	NM_026626	1700073K01Rik		ILMN_1229981	001400709	S	11	GGGACTGCATTAATCAGCCTTTGTAGGCTTTGTGATGCTGAATCTTCACC										
Mus musculus	RefSeq	ILMN_201431	ILMN_201431	LOC385151	XM_358089.1	XM_358089.1			38093687	XM_358089.1	LOC385151		ILMN_1240698	002650592	S	705	CCCTCCTTTAGGCAAGAGAATGTGCCAGCCCTTTGATACTTTTAAGCTGC										
Mus musculus	MEEBO	ILMN_214879	ILMN_214879	BC016608	scl49720.1.1_123	NM_146080.1			22122580	NM_146080.1	BC016608		ILMN_2652989	004200551	S	1191	AAGAGGCTTCAATGTTGGTGGTGTTAGCTCTCTCTGAGTACCCAAGGAAC										
Mus musculus	Riken	ILMN_202923	ILMN_202923	AB041549	ri|4732484F03|PX00052B21|AK029046|4115					AK029046	AB041549		ILMN_2553359	004810601	S	2583	TTTATCCTTCCTGGGGCCTTTTCCTTGATTACCGAGACTCTGAGGGGCTC										
Mus musculus	RefSeq	ILMN_212251	ILMN_212251	OLFR1153	NM_146640.2	NM_146640.2		258633	122056737	NM_146640.2	Olfr1153	NP_666851.2	ILMN_1238624	005290348	S	573	CCTATTACTATCTTGTTCAGATACAGAGGTCAATGAACTAGTTATATTCA	2	+	87736906-87736955	2qD	Mus musculus olfactory receptor 1153 (Olfr1153), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR177-7	MOR177-7
Mus musculus	MEEBO	ILMN_191618	ILMN_191618	TMEM23	scl52550.23_145	NM_144792.2			31981717	NM_144792.2	Tmem23		ILMN_2480682	003800228	S	9	TCCAGAGAGGTTTGCTCGCCTGGGGTTTTATACAGTCAGCAGAGACGGTG										
Mus musculus	MEEBO	ILMN_185986	ILMN_185986	1700003N22RIK	scl0229049.1_330				38076167	XM_130789	1700003N22Rik		ILMN_2431667	003780669	S	20	CCGCCCGCTCCCTTACCAGTTTATAACTTCTATGAATATTCCCATTTAAA										
Mus musculus	RefSeq	ILMN_222491	ILMN_254102	C77370	NM_001077354.2	NM_001077354.2		245555	148539921	NM_001077354.2	C77370	NP_001070822.2	ILMN_1218340	003890392	S	1602	CCCCAGTGTCTTTACTACGTGTCCCAAGCGGGAATCTAAGAGTGGAATCC				XqD	Mus musculus expressed sequence C77370 (C77370), mRNA. XM_985501		The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	KIAA2022; mKIAA2022; C77386; A230051P11	KIAA2022; mKIAA2022; C77386; A230051P11
Mus musculus	RefSeq	ILMN_212153	ILMN_312880	LOC100040601	XM_001475251.1	XM_001475251.1		100040601	149264817	XM_001475251.1	LOC100040601	XP_001475301.1	ILMN_2623315	006960270	S	4299	TCTAGGGTAACTGCTGGGAGGACACACTGTGGGCAGGAAATGCACAGCTG	13|NT_166323.1	+	93024-93073		PREDICTED: Mus musculus hypothetical protein LOC100040601 (LOC100040601), mRNA.					
Mus musculus	RefSeq	ILMN_197993	ILMN_197993	LOC268906	XM_196164.2	XM_196164.2			38080032	XM_196164.2	LOC268906		ILMN_2530103	004850309	S	244	TGTGTACTGCAGCCAGTGACTCTGAATGGGAACTCCGGAGTAGCATGCAG										
Mus musculus	RefSeq	ILMN_199147	ILMN_199147	LOC380707	XM_354622.1	XM_354622.1			38091458	XM_354622.1	LOC380707		ILMN_1252450	006520475	S	276	TCAGCTGGTGGTGATTGCCCATGACACATGCACCACTGTTGCCTTCACAC										
Mus musculus	RefSeq	3010033P07Rik	ILMN_213995	RPS9	NM_029767.2	NM_029767.2		76846	142375455	NM_029767.2	Rps9	NP_084043.1	ILMN_1377921	000520379	S	251	CCCCGGCGTCTGTTTGAAGGCAATGCTCTCCTGCGGCGGCTTGTTCGCAT	7	+	3656352-3656370:3657335-3657365	7qA1	Mus musculus ribosomal protein S9 (Rps9), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	AL022771; AL022885; MGC4138; 3010033P07Rik	AL022771; AL022885; MGC4138; 3010033P07Rik
Mus musculus	RefSeq	ILMN_213995	ILMN_213995	RPS9	NM_029767.2	NM_029767.2		76846	142375455	NM_029767.2	Rps9	NP_084043.1	ILMN_2643092	002340100	S	203	AAGATCCGTAAGGCGGCCCGGGAGCTGTTGACGCTAGACGAGAAGGATCC	7	+	3656304-3656353	7qA1	Mus musculus ribosomal protein S9 (Rps9), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	AL022771; AL022885; MGC4138; 3010033P07Rik	AL022771; AL022885; MGC4138; 3010033P07Rik
Mus musculus	RefSeq	ILMN_220641	ILMN_312843	LOC100042910	XM_001479893.1	XM_001479893.1		100042910	149249321	XM_001479893.1	LOC100042910	XP_001479943.1	ILMN_2724752	002690554	S	422	GGAGAAAAATCGGAAGCCCTGGGCAGCATTGCACTTGACAAATATGGGCC	2	+	57089059-57089108	2qC1.1	PREDICTED: Mus musculus hypothetical protein LOC100042910 (LOC100042910), mRNA.					
Mus musculus	RefSeq	ILMN_229155	ILMN_229155	NCAPH	NM_144818.1	NM_144818.1		215387	21450192	NM_144818.1	Ncaph	NP_659067.1	ILMN_2797642	006200367	S	2372	CACCACGCTAGGAAGCTCCATGCTGTTGGAAGGTCTCACGTGGGTAACGT	2	-	126795474-126795523	2qF1	Mus musculus non-SMC condensin I complex, subunit H (Ncaph), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]		MGC38424; mKIAA0074; HCAP-H; A730011O11Rik; Brrn1	MGC38424; mKIAA0074; HCAP-H; A730011O11Rik; Brrn1
Mus musculus	RefSeq	ILMN_221631	ILMN_221631	SPAG6	NM_015773.1	NM_015773.1		50525	7657606	NM_015773.1	Spag6	NP_056588.1	ILMN_2855931	005960142	S	2016	GACGACAGGGCATTGCAACCCTTGTATAAGAGGTTTGGATGCTAATGCAG	16	-	16753440-16753489	16qA3	Mus musculus sperm associated antigen 6 (Spag6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221631	ILMN_221631	SPAG6	NM_015773.1	NM_015773.1		50525	7657606	NM_015773.1	Spag6	NP_056588.1	ILMN_2855928	003850661	S	2237	TGGCCACAGTGTTCTCCTGGCTTAGGCTCACATTACCAAATGCCCAAGTC	16	-	16753219-16753268	16qA3	Mus musculus sperm associated antigen 6 (Spag6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_242355	ILMN_242355	OLFR1331	NM_001011856.1	NM_001011856.1		258159	58801469	NM_001011856.1	Olfr1331	NP_001011856.1	ILMN_2966586	004860204	S	763	CCAGCCACTTACACTTACTTGAGGCCCAACTCCAGTTACTCCCCTGAGAG	4	+	118542150-118542199	4qD2.1	Mus musculus olfactory receptor 1331 (Olfr1331), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR259-3P	MOR259-3P
Mus musculus	RefSeq	ILMN_198304	ILMN_198304	LOC232606	XM_124826.2	XM_124826.2			38083743	XM_124826.2	LOC232606		ILMN_2531208	006510672	S	122	AAATGATTGGCCTGAAGGCTAAGCTCTACCATAAACAGCGCCATGCTGAG										
Mus musculus	RefSeq	ILMN_218493	ILMN_218493	DDX17	NM_152806.3	NM_152806.3		67040	93588009	NM_152806.3	Ddx17	NP_690019.2	ILMN_2696511	004920382	S	630	GTGGTTACTAAGTTCTTCTACATTCTAGCTTCGAAAGGGGGTGGCACTAG	15	-	79362668-79362717	15qE1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (Ddx17), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	MGC79147; Gm926; 2610007K22Rik; C80929; AI047725; A430025E01Rik	MGC79147; Gm926; 2610007K22Rik; C80929; AI047725; A430025E01Rik
Mus musculus	RefSeq	ILMN_225532	ILMN_225532	EG545253	NM_001033789.1	NM_001033789.1		545253	85702102	NM_001033789.1	EG545253	NP_001028961.1	ILMN_3162692	003120730	I	1592	GATAACCCTAAGGGCGCAGTAGTGGCACACATATCCTGGTGGTAACCAAC	18	+	39130333-39130382	18qB3	Mus musculus predicted gene, EG545253 (EG545253), mRNA.					
Mus musculus	RefSeq	ILMN_198630	ILMN_325879	LOC668387	XR_031651.1	XR_031651.1		668387	149272077	XR_031651.1	LOC668387		ILMN_1249235	000110647	S	267	GAGAACTGGAGAGAGGAAGTGCAAGTCTGTTCGTGGATGCAATGTGGACG				XqD	PREDICTED: Mus musculus similar to ribosomal protein S6 (LOC668387), misc RNA.					
Mus musculus	MEEBO	ILMN_187745	ILMN_187745	ZFP458	scl0238690.1_271				47564120	NM_001001152	Zfp458		ILMN_2446766	003120095	S	12	GTGGAGCTGTTAGACTCTGTGTTTGTCCTTGAAGACTTGGAGCTGATAGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212916	ILMN_212916	TMEM71	NM_172514.3	NM_172514.3		213068	146149303	NM_172514.3	Tmem71	NP_766102.1	ILMN_2631610	000940682	S	2395	CAGATATAACCTGTTGAGGATGCTCCATGCTGAGCAATGTCTATGTATAG				15qD2	Mus musculus transmembrane protein 71 (Tmem71), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			E430024D12; AI661017	E430024D12; AI661017
Mus musculus	RefSeq	ILMN_223127	ILMN_212125	EPC1	NM_007935.1	NM_007935.1		13831	6679654	NM_007935.1	Epc1	NP_031961.1	ILMN_2768330	005340270	S	2860	TTGTGTAGCTGGTGTCATCACATCATGTGCATGGTGCGGAACCTGCTGTC	18	-	6436835-6436884	18qA1	Mus musculus enhancer of polycomb homolog 1 (Drosophila) (Epc1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]; Any epigenetic process that stops, prevents or reduces the rate of gene expression [goid 45814] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]		A930032N02Rik; 5730566F07Rik; 2400007E14Rik	A930032N02Rik; 5730566F07Rik; 2400007E14Rik
Mus musculus	RefSeq	ILMN_212125	ILMN_212125	EPC1	NM_007935.1	NM_007935.1		13831	6679654	NM_007935.1	Epc1	NP_031961.1	ILMN_2623032	000070474	S	3584	CCACAAATATCGGGTGCCTTCCTTTGGAAACATTTGACCTCTCTTCTGTG	18	-	6436111-6436160	18qA1	Mus musculus enhancer of polycomb homolog 1 (Drosophila) (Epc1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]; Any epigenetic process that stops, prevents or reduces the rate of gene expression [goid 45814] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISA]		A930032N02Rik; 5730566F07Rik; 2400007E14Rik	A930032N02Rik; 5730566F07Rik; 2400007E14Rik
Mus musculus	Riken	ILMN_201609	ILMN_201609	DAB2	ri|0610039N04|R000004J19|AK002850|1098					AK002850	Dab2		ILMN_2543173	001050672	S	849	CAACAGGTGACTGTTCAGAAGTCTAACATTGTGACTCCTGTTTGGTGTCC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]	The process whereby cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes [goid 6907] [evidence IMP]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IMP]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IPI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_201128	ILMN_253043	1500034J01RIK	XM_912953.3	XM_912953.3		66498	149258846	XM_912953.3	1500034J01Rik	XP_918046.1	ILMN_1242559	006660180	S	1813	TCCAGCCACGGATCTGGCAAGGCCCCTTCACTGCTCTGACCTCGAGCACT				8qB3.3	PREDICTED: Mus musculus RIKEN cDNA 1500034J01 gene (1500034J01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201128	ILMN_253043	1500034J01RIK	XM_912953.3	XM_912953.3		66498	149258846	XM_912953.3	1500034J01Rik	XP_918046.1	ILMN_2541190	001430048	S	274	GTGACAGAAAAGACGAACATACTTCTGCGGTACCTGCACCAGCAATGGGA				8qB3.3	PREDICTED: Mus musculus RIKEN cDNA 1500034J01 gene (1500034J01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_241678	ILMN_241678	EG435970	NM_001034893.1	NM_001034893.1		435970	85702249	NM_001034893.1	EG435970	NP_001030065.1	ILMN_3114461	002320240	A	2973	TGCCCAGTGAAGTCAACTCAGAATTGAGAAGGCCATTGGGCGTGACTGTG	7	+	43059889-43059938		Mus musculus predicted gene, EG435970 (EG435970), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC76792	MGC76792
Mus musculus	RefSeq	ILMN_199944	ILMN_326251	LOC666652	XR_034422.1	XR_034422.1		666652	149253355	XR_034422.1	LOC666652		ILMN_1222286	002750292	S	522	GGACCACCAGAAATATACAGTGACACACAGTTCCCATCCCTGCACTCCAC	4	-	147120097-147120146	4qE2	PREDICTED: Mus musculus similar to CDV3 protein (LOC666652), misc RNA.					
Mus musculus	RefSeq	ILMN_232032	ILMN_232032	OLFR1211	NM_001011804.1	NM_001011804.1		258025	58801373	NM_001011804.1	Olfr1211	NP_001011804.1	ILMN_3160459	001940435	S	305	CTGAGCACTTCCTTGCAGCAGTAGAAGTGATTGTCTTGACAGCCATGGCC	2	-	88770116-88770165	2qE1	Mus musculus olfactory receptor 1211 (Olfr1211), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR233-16P; MOR233-21	MOR233-16P; MOR233-21
Mus musculus	Riken	ILMN_202713	ILMN_202713	2410006F04RIK	ri|2410006F04|ZX00033M23|AK019107|755					AK019107	2410006F04Rik		ILMN_1230434	006220358	S	485	GCAGTATCTTCTGGCCTCCTCCAAGGGGCTGGCTTCAAGTCTCCAGCTCT										
Mus musculus	RefSeq	ILMN_218402	ILMN_218402	DNTTIP2	NM_153806.1	NM_153806.1		99480	24418930	NM_153806.1	Dnttip2	NP_722501.1	ILMN_2695391	005820017	S	2299	ATAGCATTTTATACATCTTGATTTGCTGAAGGTTATCACATAATTTCTAT	3	+	121988085-121988134	3qG1	Mus musculus deoxynucleotidyltransferase, terminal, interacting protein 2 (Dnttip2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AA408582; 4930588M11Rik; MGC27716; HSU15552; AU014960	AA408582; 4930588M11Rik; MGC27716; HSU15552; AU014960
Mus musculus	RefSeq	ILMN_214505	ILMN_214505	CAP1	NM_007598.2	NM_007598.2		12331	31560729	NM_007598.2	Cap1	NP_031624.1	ILMN_2648661	003440343	S	2309	ACATCAGAATCTTGCACAGCATTGCAAAATCCCAGTGCTCCCTCTAGGAC	4	-	122536456-122536505	4qD2.2	Mus musculus CAP, adenylate cyclase-associated protein 1 (yeast) (Cap1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IGI]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191243	ILMN_191243	2610024B07RIK	scl32175.1_62						2610024B07Rik		ILMN_1252402	003120424	S	19	CATGGCTTCTCTGTTGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCG										
Mus musculus	RefSeq	ILMN_188509	ILMN_224882	CDH10	NM_009865.2	NM_009865.2		320873	142364105	NM_009865.2	Cdh10	NP_033995.1	ILMN_2745139	007380095	S	2514	GAACCCTGCAGCTATCGAGGAGAAAAAGCTCCGGCGAGATATAATTCCTG	15	+	18943098-18943147	15qA2	Mus musculus cadherin 10 (Cdh10), mRNA. XM_907354 XM_920350 XM_920370 XM_920380 XM_920385 XM_920393 XM_978178 XM_978217 XM_978262 XM_978299 XM_978342 XM_978375 XM_978402 XM_978430 XM_978467 XM_978537 XM_983229	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A830016G23Rik; C030003B10Rik; C030011H18Rik	A830016G23Rik; C030003B10Rik; C030011H18Rik
Mus musculus	MEEBO	ILMN_219521	ILMN_219521	A630029G22RIK	scl0239606.2_21	XM_139533.3			38077111	XM_139533.3	A630029G22Rik		ILMN_1241567	004250592	S	1595	CACCCCTCCATAACCTTATCTGCACTTGTGAGTCGACGTTTTTGCTTGTC										
Mus musculus	RefSeq	ILMN_187774	ILMN_259879	BAZ2B	NM_001001182.3	NM_001001182.3		407823	118131072	NM_001001182.3	Baz2b	NP_001001182.2	ILMN_2446999	002750129	S	2161	TGACACTGAAGGCGAGAAACCTGCCGTGAACCTGACCCAGACAAGCTCCT	2	-	59798036-59798085	2qC1.1	Mus musculus bromodomain adjacent to zinc finger domain, 2B (Baz2b), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC053917; 5830435C13Rik; D2Ertd794e	BC053917; 5830435C13Rik; D2Ertd794e
Mus musculus	RefSeq	ILMN_196261	ILMN_259879	BAZ2B	NM_001001182.3	NM_001001182.3		407823	118131072	NM_001001182.3	Baz2b	NP_001001182.2	ILMN_2523119	002120291	S	2303	TCTGAGTCCCAGCCTCCTGCTTTTCTTGGCACTTCTTCTTCCACACTCAC	2	-	59797894-59797943	2qC1.1	Mus musculus bromodomain adjacent to zinc finger domain, 2B (Baz2b), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC053917; 5830435C13Rik; D2Ertd794e	BC053917; 5830435C13Rik; D2Ertd794e
Mus musculus	RefSeq	ILMN_222649	ILMN_222649	FOLR4	NM_022888.1	NM_022888.1		64931	12584981	NM_022888.1	Folr4	NP_075026.1	ILMN_2752836	005870129	S	743	CCCTTTTTCGTATCACTTCCCCACCCCGGATGACCTGTGTGAGAAGATCT	9	-	14704965-14705014	9qA2	Mus musculus folate receptor 4 (delta) (Folr4), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence TAS]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	0910001L11Rik; Folbp3; C86255	0910001L11Rik; Folbp3; C86255
Mus musculus	RefSeq	ILMN_194739	ILMN_194739	TRIM17	NM_031172.2	NM_031172.2		56631	141802118	NM_031172.2	Trim17	NP_112449.1	ILMN_2509171	006350750	S	1525	ATAGAGGCTTGAAGCCGGGCAGACACTGGGTGTGCCACAGTTCCCCAGAA	11	+	58785076-58785079:58785080-58785125	11qB1.3	Mus musculus tripartite motif-containing 17 (Trim17), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rnf16; terf	Rnf16; terf
Mus musculus	RefSeq	ILMN_217831	ILMN_217831	OLFR1038	NM_147013.2	NM_147013.2		259015	112983542	NM_147013.2	Olfr1038	NP_667224.1	ILMN_1237162	001110040	S	816	CCTGCGGCTCCCACATGGTAGCTGTTACTATTTTTTATGGTACGCTCATC	2	+	85962800-85962849	2qD	Mus musculus olfactory receptor 1038 (Olfr1038), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR185-3	MOR185-3
Mus musculus	RefSeq	ILMN_242066	ILMN_242066	AI316807	NM_001012667.1	NM_001012667.1		102032	60592995	NM_001012667.1	AI316807	NP_001012685.1	ILMN_3160963	006100050	S	1364	CTGTCTTGCTCCCTGTTGCTGTGGATGGTTACAGCAGTGTCTTCTGCTGC	8	-	23573107-23573156	8qA2	Mus musculus expressed sequence AI316807 (AI316807), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BG694986; EST-c39	BG694986; EST-c39
Mus musculus	Riken	ILMN_202133	ILMN_202133	2900024F02RIK	ri|2900024F02|ZX00068M20|AK013586|477					AK013586	2900024F02Rik		ILMN_2547260	006290424	S	63	GCGCTCACGCCGTTGCTAGGCGACCACAGCAGTTTTTCCTATCTGATTGG										
Mus musculus	MEEBO	ILMN_223499	ILMN_223499	OLFR493	scl0258307.1_39				22129670	NM_146310	Olfr493		ILMN_2764828	001580154	S	586	GTGTCTCTGAAGTGGTAACGTCATTTTTTTCTGGCTCAGTTACTATGATC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	Riken	ILMN_205460	ILMN_205460	2310061K05RIK	ri|A430025D19|PX00135I14|AK039886|1431					AK039886	2310061K05Rik		ILMN_1232277	001170044	S	1232	GTGACACTCCAAGACCCAGTCAACACAGGTCTCCACTGCCATCTTCAACC										
Mus musculus	RefSeq	ILMN_213715	ILMN_213715	1700034I23RIK	NM_028494.1	NM_028494.1		73297	13386311	NM_028494.1	1700034I23Rik	NP_082770.1	ILMN_2862353	000380176	S	1947	GCGCCTGCCCAAACTCAACACTGTCAGCGCCAGAACACAATGACACTAAG	3	-	40997096-40997145	3qB	Mus musculus RIKEN cDNA 1700034I23 gene (1700034I23Rik), mRNA.				MGC143484	MGC143484
Mus musculus	Riken	ILMN_203892	ILMN_203892	GDAP1	ri|C530015K17|PX00081C13|AK049655|2164					AK049655	Gdap1		ILMN_1236913	000540520	S	2076	CCAGGAGGATCACTGAGTTCCAGGCCACCCTGAGCTACAAAGTGAGATAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Mus musculus	RefSeq	ILMN_185419	ILMN_310146	LOC100040839	XM_001475373.1	XM_001475373.1		100040839	149257292	XM_001475373.1	LOC100040839	XP_001475423.1	ILMN_2426898	004220445	S	246	GGTGACTCCCCTGTACCCTGCAACTCGTGGTGTCCTAGTGAAGAGAGGGC	7	+	63972078-63972127	7qC	PREDICTED: Mus musculus hypothetical protein LOC100040839 (LOC100040839), mRNA.					
Mus musculus	RefSeq	ILMN_211115	ILMN_211115	2810002N01RIK	NM_026511.1	NM_026511.1		68020	21735434	NM_026511.1	2810002N01Rik	NP_080787.1	ILMN_1217827	004850681	S	694	TCCCTTGGGCCGTGCTTGCCTGGCTCAGGCTCCTCAGTACGCTGTATGCT	12	+	112972070-112972119	12qF1	Mus musculus RIKEN cDNA 2810002N01 gene (2810002N01Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Apop-1; 1700081D05Rik	Apop-1; 1700081D05Rik
Mus musculus	RefSeq	ILMN_229800	ILMN_229800	ZFP661	NM_028141.2	NM_028141.2		72180	34328309	NM_028141.2	Zfp661	NP_082417.2	ILMN_2854593	003130255	S	2639	GAGCCTAAGGGGGCAATTCTCATTCAAACCACCACATTCTGCTCACGGAC	2	-	127401560-127401609	2qF1	Mus musculus zinc finger protein 661 (Zfp661), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	A1-5; 2810405K07Rik	A1-5; 2810405K07Rik
Mus musculus	RefSeq	ILMN_224296	ILMN_252669	RAB5C	NM_024456.2	NM_024456.2		19345	113866023	NM_024456.2	Rab5c	NP_077776.2	ILMN_1225414	000650064	S	1577	AACCAATCAGTATCTTGTCAATATAGTCAGCCGATCGATCGACCTCACGC				11qD	Mus musculus RAB5C, member RAS oncogene family (Rab5c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence IDA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IDA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AI326010; Rabl	AI326010; Rabl
Mus musculus	MEEBO	ILMN_191098	ILMN_191098	MBTD1	scl41036.22_23				19527229	NM_134012	Mbtd1		ILMN_2476070	003290092	S	20	AGGTTTTTACATTGTTTCTGTGTGCGTTTGATATATAAACAATATCTGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_257405	ILMN_257405	SCOC	NM_019708.3	NM_019708.3		56367	114687764	NM_019708.3	Scoc	NP_062682.1	ILMN_3149024	001850072	A	1320	GCTCGCAGTGTTTTCCCTCTAAATGTGTATTACCTCTGGCCCACAGCTGC	8	-	85958953-85959002	8qC2	Mus musculus short coiled-coil protein (Scoc), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2810002J11Rik; AA415030; 0610011C06Rik	2810002J11Rik; AA415030; 0610011C06Rik
Mus musculus	RefSeq	ILMN_219806	ILMN_236297	ATAD5	NM_001029856.1	NM_001029856.1		237877	71143101	NM_001029856.1	Atad5	NP_001025027.1	ILMN_2713786	006550364	S	2578	CAAGTCCAACTTCTATAAGAGAACCAGAGAAAAGTCAGAAGAAACTTCAG	11	+	79915309-79915358	11qB5	Mus musculus ATPase family, AAA domain containing 5 (Atad5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	FLJ12735; FRAG1; C130052G03Rik; RP23-328O2.1; Gm17	FLJ12735; FRAG1; C130052G03Rik; RP23-328O2.1; Gm17
Mus musculus	RefSeq	ILMN_185616	ILMN_185616	TREM1	NM_021406.2	NM_021406.2		58217	31543891	NM_021406.2	Trem1	NP_067381.1	ILMN_2871945	004280504	S	2646	GATCAGAAGCAGGCAGACCCCAAGGGTCCAGTTTATCCTCTGCTCTTGAC	17	+	47711988-47712037	17qC	Mus musculus triggering receptor expressed on myeloid cells 1 (Trem1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185616	ILMN_185616	TREM1	NM_021406.2	NM_021406.2		58217	31543891	NM_021406.2	Trem1	NP_067381.1	ILMN_2428545	006510215	S	14	ACTTTGGGTTGGTGCTCTGGGACACGTCTTTGGAGGGCTGGTGCAGATGC	17	+	47698191-47698200:47698201-47698240	17qC	Mus musculus triggering receptor expressed on myeloid cells 1 (Trem1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219960	ILMN_219960	GK2	NM_010294.1	NM_010294.1		14626	6753999	NM_010294.1	Gk2	NP_034424.1	ILMN_1259416	005130725	S	1665	GAGCAAGATGTGTCTCAACTGCTGAAGAGTAATTTGAACCACGGACTTGC	5	-	97884313-97884331:97884332-97884362	5qE3	Mus musculus glycerol kinase 2 (Gk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 6072] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + glycerol = ADP + glycerol 3-phosphate [goid 4370] [evidence IEA]	GKTA; Gk-rs2	GKTA; Gk-rs2
Mus musculus	MEEBO	ILMN_217890	ILMN_217890	F10	scl34064.10_3	NM_007972.2			31982376	NM_007972.2	F10		ILMN_2688912	001230639	S	1797	ACCCACAGCCGAGACCCCAAGGACAGCAGGTCCGCCCAATTAAAGCAGTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_202251	ILMN_202251	4931406B18RIK	ri|4931406B18|PX00016A17|AK016431|2568					AK016431	4931406B18Rik		ILMN_1223910	002570458	S	2245	GCTCTTGGACTGAGCACCAGCTAGGCCCCAGCTCCTCAAAAGAGCACTCT										
Mus musculus	RefSeq	ILMN_186874	ILMN_252091	CSMD1	NM_053171.2	NM_053171.2		94109	124248565	NM_053171.2	Csmd1	NP_444401.2	ILMN_1230420	001260678	S	11226	CGTCTGCTGGCATAACGCAGTGGGAATTTCTTCTCAACCATGACCGAGTC	8	-	15895547-15895596	8qA1.1-qA1.3	Mus musculus CUB and Sushi multiple domains 1 (Csmd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1890; KIAA1890; B930082H09	mKIAA1890; KIAA1890; B930082H09
Mus musculus	RefSeq	ILMN_186874	ILMN_252091	CSMD1	NM_053171.2	NM_053171.2		94109	124248565	NM_053171.2	Csmd1	NP_444401.2	ILMN_2518319	004010474	S	13052	GGGTCCACAGAGGTTCTTCATTGGCTCCCTGGGAAATTCAGATGATGTCA	8	-	15893721-15893770	8qA1.1-qA1.3	Mus musculus CUB and Sushi multiple domains 1 (Csmd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1890; KIAA1890; B930082H09	mKIAA1890; KIAA1890; B930082H09
Mus musculus	RefSeq	ILMN_223125	ILMN_227169	SMAD7	NM_001042660.1	NM_001042660.1		17131	111154104	NM_001042660.1	Smad7	NP_001036125.1	ILMN_2759660	001050403	S	4225	TATAAGCATCATTATTTATGTATTGTGCAATGTGTATAAACGAGAAGAAT	18	+	75555372-75555421	18qE3	Mus musculus MAD homolog 7 (Drosophila) (Smad7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IPI]	Madh7	Madh7
Mus musculus	RefSeq	ILMN_198209	ILMN_228662	CDKL4	NM_001033443.3	NM_001033443.3		381113	146198538	NM_001033443.3	Cdkl4	NP_001028615.1	ILMN_1248671	003460048	S	1426	GCCGGGCTTCCTCAGGCAATCGGTACTGTGCATCTGTGGACTTATGCTCC				17qE3	Mus musculus cyclin-dependent kinase-like 4 (Cdkl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	Gm942	Gm942
Mus musculus	MEEBO	ILMN_217550	ILMN_217550	NALP6	scl31905.5_10	NM_133946.1			23956261	NM_133946.1	Nalp6		ILMN_2684600	004480653	S	2730	CACCATCGCACCATTGCAATAAATGCATCCCTTCATCCTTCCAAACCTCC										
Mus musculus	RefSeq	ILMN_220177	ILMN_220177	MTO1	NM_026658.1	NM_026658.1		68291	19073794	NM_026658.1	Mto1	NP_080934.1	ILMN_2718612	002100332	S	1939	TGTCATTGTCCCAGGAAGTCCGGGAGAAGCTACACTTGAGTCGCCCACAG	9	+	78318546-78318595	9qE1	Mus musculus mitochondrial translation optimization 1 homolog (S. cerevisiae) (Mto1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The process whereby a uridine in position 34 of a tRNA is post-transcriptionally modified [goid 2098] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence TAS]	Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	2310039H01Rik; 5730419A02Rik	2310039H01Rik; 5730419A02Rik
Mus musculus	RefSeq	ILMN_187285	ILMN_243660	E130308A19RIK	NM_153158.3	NM_153158.3		230259	146149068	NM_153158.3	E130308A19Rik	NP_694798.1	ILMN_2686320	001300072	S	2547	TATAATCACTGTTACAGACTGGCAAAAACCATAGCGGTTCTCAGGCAACT				4qB3	Mus musculus RIKEN cDNA E130308A19 gene (E130308A19Rik), transcript variant 1, mRNA.				MGC47072	MGC47072
Mus musculus	Riken	ILMN_205291	ILMN_205291	4832408C21RIK	ri|4832408C21|PX00313I10|AK029270|3164					AK029270	4832408C21Rik		ILMN_1246021	006520398	S	3084	GTGACTGCCCCTGATGTAATGTTCCACGTATGGTTGGGACTGTGCTGGGG										
Mus musculus	RefSeq	ILMN_188327	ILMN_240341	ACSL5	NM_027976.2	NM_027976.2		433256	75992928	NM_027976.2	Acsl5	NP_082252.1	ILMN_2451718	007400739	S	726	TCCTGCCAGCAAGAAGCCGGAGCCAGAAAGCCTCACTCGGAAGCTCCAAG	19	+	55328584-55328633	19qD2	Mus musculus acyl-CoA synthetase long-chain family member 5 (Acsl5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]	ACS2; 1700030F05Rik; Facl5; ACS5	ACS2; 1700030F05Rik; Facl5; ACS5
Mus musculus	RefSeq	ILMN_240341	ILMN_240341	ACSL5	NM_027976.2	NM_027976.2		433256	75992928	NM_027976.2	Acsl5	NP_082252.1	ILMN_2892222	001500102	S	2974	GTCCTGAGTTGGGAACAAAGCACTGTGGGCAAGGTCGATGCAATGCCTGC	19	+	55370941-55370990	19qD2	Mus musculus acyl-CoA synthetase long-chain family member 5 (Acsl5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]	ACS2; 1700030F05Rik; Facl5; ACS5	ACS2; 1700030F05Rik; Facl5; ACS5
Mus musculus	RefSeq	ILMN_240341	ILMN_240341	ACSL5	NM_027976.2	NM_027976.2		433256	75992928	NM_027976.2	Acsl5	NP_082252.1	ILMN_2892227	000730463	S	2515	CCAGGAGCAGACCAGTATTGCAAGTTTTTGTCCATGGGGAGAGCTTACGG	19	+	55368171-55368220	19qD2	Mus musculus acyl-CoA synthetase long-chain family member 5 (Acsl5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]	ACS2; 1700030F05Rik; Facl5; ACS5	ACS2; 1700030F05Rik; Facl5; ACS5
Mus musculus	RefSeq	ILMN_219182	ILMN_219182	DUS3L	NM_144858.1	NM_144858.1		224907	21450076	NM_144858.1	Dus3l	NP_659107.1	ILMN_2705331	004250364	S	193	GAATATCTGGATGGAGACAAGCAGGAGGGTGCATGCCAGGAAGTGCCCAC	17	+	56904976-56905025	17qD	Mus musculus dihydrouridine synthase 3-like (S. cerevisiae) (Dus3l), mRNA. XM_978180 XM_978219 XM_978263		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor [goid 17150] [evidence IEA]	MGC56820; AI662135; AW557805	MGC56820; AI662135; AW557805
Mus musculus	RefSeq	ILMN_219182	ILMN_219182	DUS3L	NM_144858.1	NM_144858.1		224907	21450076	NM_144858.1	Dus3l	NP_659107.1	ILMN_1256514	006370543	S	1530	TGGGGACATCCTTTCGTTTGAGGACGCCAACTGTGCCATGCAGACAGGCG	17	+	56908477-56908526	17qD	Mus musculus dihydrouridine synthase 3-like (S. cerevisiae) (Dus3l), mRNA. XM_978180 XM_978219 XM_978263		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor [goid 17150] [evidence IEA]	MGC56820; AI662135; AW557805	MGC56820; AI662135; AW557805
Mus musculus	RefSeq	ILMN_219182	ILMN_219182	DUS3L	NM_144858.1	NM_144858.1		224907	21450076	NM_144858.1	Dus3l	NP_659107.1	ILMN_2904979	005690747	S	1628	TCACGGAGATCAAAGAACAGAGGCACTGGGACATCTCGTCCTCCGAGCGC	17	+	56908699-56908748	17qD	Mus musculus dihydrouridine synthase 3-like (S. cerevisiae) (Dus3l), mRNA. XM_978180 XM_978219 XM_978263		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor [goid 17150] [evidence IEA]	MGC56820; AI662135; AW557805	MGC56820; AI662135; AW557805
Mus musculus	Riken	ILMN_206810	ILMN_206810	D930002C22RIK	ri|D930002C22|PX00200F16|AK086066|2065					AK086066	D930002C22Rik		ILMN_2582856	004120022	S	1670	CGGTAAAGGGGACTGAGAGCGAATGGTTGAAATCAGAGCGTTTCGTCCCA										
Mus musculus	Riken	ILMN_202086	ILMN_202086	SNRP70	ri|2700022N21|ZX00063I09|AK012272|2170					AK012272	Snrp70		ILMN_2546888	005910468	S	1779	GGCTGGGACCTGGACAGGGACTTTTTGGCCTTCTTAACAGCCCTGCCTGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215633	ILMN_215633	AGXT2L1	NM_027907.2	NM_027907.2		71760	141802115	NM_027907.2	Agxt2l1	NP_082183.1	ILMN_1229990	004850725	S	2179	GCCATGTTGTGGGAACTGGAAGGGAACACATACACAGAGACCCTTGCGTG	3	+	130338156-130338205	3qG3	Mus musculus alanine-glyoxylate aminotransferase 2-like 1 (Agxt2l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	1300019H02Rik; AI195447	1300019H02Rik; AI195447
Mus musculus	RefSeq	ILMN_215024	ILMN_215024	NAGPA	NM_013796.2	NM_013796.2		27426	142371629	NM_013796.2	Nagpa	NP_038824.1	ILMN_2654635	004670494	S	1836	CCCAGGAAGCCACTAGCAAATGGAACTCTGTAACCCCATCATGACAAGAG	16	-	5195639-5195688	16qA1	Mus musculus N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase (Nagpa), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: glycoprotein N-acetyl-D-glucosaminyl-phospho-D-mannose + H2O = N-acetyl-D-glucosamine + glycoprotein phospho-D-mannose [goid 3944] [evidence IEA]	AI596180	AI596180
Mus musculus	MEEBO	ILMN_223509	ILMN_223509	2610528A17RIK	scl26230.6_207	XM_132261.2			28520195	XM_132261.2	2610528A17Rik		ILMN_1222334	004040020	S	1713	AAATGATGTGTTTACTCCAGATAGTCTGATGACTTAAGAAAAAAACTGTC										
Mus musculus	Riken	ILMN_206892	ILMN_206892	E030038D23RIK	ri|E030038D23|PX00206H01|AK087243|1604					AK087243	E030038D23Rik		ILMN_1249710	002710433	S	1489	GGGTCTAGTGCTATGCACTTGTAATTCCAGTGCTTGGAAGGGGAAGGATC										
Mus musculus	RefSeq	ILMN_185469	ILMN_228753	GTF2H3	NM_181410.2	NM_181410.2		209357	31340972	NM_181410.2	Gtf2h3	NP_852075.1	ILMN_1243127	001400722	S	1649	GAGTTCAAACCAACCAGGGTTGCATCTTGCCACCTTTTTTACAAAAATAT	5	+	125046697-125046746	5qF	Mus musculus general transcription factor IIH, polypeptide 3 (Gtf2h3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex that contains kinase activity directed towards the C-terminal Domain (CTD) of the largest subunit of RNA polymerase II and is essential for initiation at RNA polymerase II promoters in vitro. In S. cerevisiae, it is composed of the 5-subunit core (Rad3p, Tfb1p, Tfb2p, Ssl1p and Tfb4p), Ssl2p, and TFIIK (Kin28p, Ccl1p, and Tfb3p). All of the subunits have equivalents in humans: the 5 subunit core is composed of XPD, p62, p55, p44, p34; the equivalent of the TFIIK subcomplex is composed of MO15, Mat1, and a cyclin; the human equivalent of Ssl2p is XPB [goid 439] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [evidence IEA]	34kDa; D5Ertd679e; BTF2; 5033417D07Rik; TFIIH; C730029A10	34kDa; D5Ertd679e; BTF2; 5033417D07Rik; TFIIH; C730029A10
Mus musculus	RefSeq	ILMN_208949	ILMN_208949	FBXW5	NM_013908.4	NM_013908.4		30839	146134347	NM_013908.4	Fbxw5	NP_038936.1	ILMN_1224907	004860376	S	2267	CAGTTTTTGCTACTGAGTGGCCTGCAGTGGACTGTGGGTGCTGCATGCTG				2qA3	Mus musculus F-box and WD-40 domain protein 5 (Fbxw5), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		AI159739; Fbw5	AI159739; Fbw5
Mus musculus	Riken	ILMN_205952	ILMN_205952	LPIN2	ri|C130095G16|PX00173M04|AK048657|3072					AK048657	Lpin2		ILMN_2576431	006760220	S	2651	TAAGAACGGGACGTTTGCTCTGCTTGAGATGAGCTCGCAGAAAGCAGTAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]		
Mus musculus	Riken	ILMN_203019	ILMN_203019	5031439A09RIK	ri|6030432I20|PX00056H14|AK031444|2341					AK031444	5031439A09Rik		ILMN_2554118	000840220	S	2135	CTGTGGGAAAATGGGGATCTGAGGTCACTTGTATGCAGGACTTCCATGGG										
Mus musculus	MEEBO	ILMN_188126	ILMN_188126	NUP93	scl33490.26.1_204				27369532	NM_172410	Nup93		ILMN_2758695	007100240	S	2547	TCATGAATTAAGCGCTGTGTTTGATGGGGTCTGGGACTGCACACTGTCAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]			
Mus musculus	Riken	ILMN_202229	ILMN_202229	4930400K19RIK	ri|4930400K19|PX00029H07|AK015025|971					AK015025	4930400K19Rik		ILMN_2547978	003940113	S	812	CAGATGTGCAAGGCCAGCTTGATACTAGCTCTGAAGCCTTGGCTCTGACG										
Mus musculus	Riken	ILMN_203980	ILMN_203980	A530014K09RIK	ri|A530014K09|PX00140M20|AK040684|1534					AK040684	A530014K09Rik		ILMN_1241495	007160681	S	1419	GCTGGAGCCTGGGAAAAAGACGCCCATCTCAGGGTTTGCTCAATGCTTGG										
Mus musculus	RefSeq	ILMN_208847	ILMN_311502	5133400J02RIK	XM_001475111.1	XM_001475111.1		71297	149261887	XM_001475111.1	5133400J02Rik	XP_001475161.1	ILMN_1254120	004590524	S	831	CAGTCATCAGGTAAGAGGACCTGTCCTATGAGAAGCTGACTCTACAGATT	11	-	51003391-51003440	11qB1.3	PREDICTED: Mus musculus RIKEN cDNA 5133400J02 gene (5133400J02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199105	ILMN_199105	LOC331595	XM_284853.2	XM_284853.2			38090934	XM_284853.2	LOC331595		ILMN_1226007	003870369	S	2818	AACAAGTTGCTGGAGGCAGAGCGCTTGAGGATGGAGGCCTTGGCAGCTCA										
Mus musculus	RefSeq	ILMN_214986	ILMN_214986	ALOX12E	NM_145684.1	NM_145684.1		11685	21729794	NM_145684.1	Alox12e	NP_663717.1	ILMN_2654225	004730092	S	2205	CCCCAACTCTATGATATGTGCTTGTTTAGTCTTGAATCCCTAGTACCCAC	11	-	70133291-70133309:70133136-70133166	11qB3	Mus musculus arachidonate lipoxygenase, epidermal (Alox12e), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,14Z)-(12S)-12-hydroperoxyicosa-5,8,10,14-tetraenoate [goid 4052] [evidence IEA]	Alox12-ps2; e-LOX1; AW259591; Aloxe; Alox12-ps1; 8-LOX	Alox12-ps2; e-LOX1; AW259591; Aloxe; Alox12-ps1; 8-LOX
Mus musculus	RefSeq	ILMN_187788	ILMN_187788	WARS2	NM_027462.2	NM_027462.2		70560	31543951	NM_027462.2	Wars2	NP_081738.2	ILMN_2888110	002630053	S	4049	GGGAGAAAACATAGCATGCTGTCTTTAACCTGGAGACTCAGGACAGCAGC	3	+	99348925-99348974	3qF2.2	Mus musculus tryptophanyl tRNA synthetase 2 (mitochondrial) (Wars2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IDA]; The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6436] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophanyl-tRNA(Trp) [goid 4830] [evidence IEA]	AI413375; 5730427B17Rik; TrpRS; 9430020O07Rik	AI413375; 5730427B17Rik; TrpRS; 9430020O07Rik
Mus musculus	RefSeq	ILMN_190074	ILMN_242741	PXMP2	NM_008993.2	NM_008993.2		19301	112421057	NM_008993.2	Pxmp2	NP_033019.2	ILMN_1219748	005090187	S	434	TTCATGGAATACTCGGTCCCTCCTGAGGTTCCCTGGGCCAGCGTCAAGAG	5	-	110710288-110710337	5qF	Mus musculus peroxisomal membrane protein 2 (Pxmp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]			22kDa; PMP22	22kDa; PMP22
Mus musculus	RefSeq	ILMN_213734	ILMN_240628	RKHD3	XM_912460.3	XM_912460.3		108797	149257394	XM_912460.3	Rkhd3	XP_917553.3	ILMN_2640229	004890709	S	2636	CTTATGGCAAAGAACACTGTATTATTTTAATAATCACACGATTGTGACGG				7qD3	PREDICTED: Mus musculus ring finger and KH domain containing 3 (Rkhd3), mRNA.					
Mus musculus	RefSeq	ILMN_216921	ILMN_216921	PCDH21	NM_130878.2	NM_130878.2		170677	42476151	NM_130878.2	Pcdh21	NP_570948.1	ILMN_2980815	002060296	S	4110	GTCCTCATCTGGAGGTCTGTAGTCTCTGGCCCACGTAGTATTGAGGGACA	14	-	37891179-37891228	14qB	Mus musculus protocadherin 21 (Pcdh21), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IMP]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mKIAA1775; Prcad	mKIAA1775; Prcad
Mus musculus	RefSeq	ILMN_209300	ILMN_209300	WDR20A	NM_027149.2	NM_027149.2		69641	61742803	NM_027149.2	Wdr20a	NP_081425.2	ILMN_2795022	003360711	S	2008	TCATCCCTCTGGGTATATAGAGTCCCAAAGTTAGCGCTCCTGTATGAGGC	12	+	112032819-112032868	12qF1	Mus musculus WD repeat domain 20a (Wdr20a), mRNA.				2310040A13Rik; 4930421J07Rik; WDR20; AI549910	2310040A13Rik; 4930421J07Rik; WDR20; AI549910
Mus musculus	MEEBO	ILMN_191779	ILMN_191779	RPS20	scl24587.3_163				37693517	NM_026147	Rps20		ILMN_2482103	001740750	S	18	CCTCATTCTTCTTAACTATTTTGTAGGCGTTTGCTATTCAAAGCACAATC						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218306	ILMN_328703	LOC100046401	XR_032583.1	XR_032583.1		100046401	149251749	XR_032583.1	LOC100046401		ILMN_2774349	001170037	S	628	AGTGGGCTAAATAACCTGGGCCTTTATGTGTAATTCTGCATCCCTAAGGG					PREDICTED: Mus musculus similar to SDR2 (LOC100046401), misc RNA.					
Mus musculus	RefSeq	ILMN_190161	ILMN_254939	GNAS	NM_010309.3	NM_010309.3		14683	117959906	NM_010309.3	Gnas	NP_034439.2	ILMN_2761847	004060500	S	2285	GCAGCAAGCTCATCGACAAGCAACTGGAGGAGGAGAAGATGGACTACATG	2	+	174125644-174125693	2qH4	Mus musculus GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus (Gnas), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS];  [goid 6112] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1
Mus musculus	RefSeq	ILMN_189408	ILMN_321241	FBXL17	XM_001478436.1	XM_001478436.1		50758	149269397	XM_001478436.1	Fbxl17	XP_001478486.1	ILMN_1243964	001500484	S	1890	AAGCCTTTTGTAAATTTGTATATGGAGGCAACAGTCTGATGTCCCCTGGC				17qE1.1	PREDICTED: Mus musculus F-box and leucine-rich repeat protein 17 (Fbxl17), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]			
Mus musculus	RefSeq	ILMN_210746	ILMN_210746	F11	NM_028066.1	NM_028066.1		109821	21312499	NM_028066.1	F11	NP_082342.1	ILMN_1236044	003060113	S	456	GGGCATGAACTATAACAGCTCTGTCGTGAAGAATGCTCGAGAATGCCAGG	8	-	46337442-46337491	8qB1.1	Mus musculus coagulation factor XI (F11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of blood coagulation [goid 30193] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	AI503996; FXI; Cf11; 1600027G01Rik	AI503996; FXI; Cf11; 1600027G01Rik
Mus musculus	RefSeq	ILMN_210746	ILMN_210746	F11	NM_028066.1	NM_028066.1		109821	21312499	NM_028066.1	F11	NP_082342.1	ILMN_3000236	005340504	S	2127	CAGAATTCCTGATCTGGGAGAACCACTGGTTGTTTTCTGCATCCAGCTAC	8	-	46326591-46326640	8qB1.1	Mus musculus coagulation factor XI (F11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of blood coagulation [goid 30193] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	AI503996; FXI; Cf11; 1600027G01Rik	AI503996; FXI; Cf11; 1600027G01Rik
Mus musculus	RefSeq	ILMN_210746	ILMN_210746	F11	NM_028066.1	NM_028066.1		109821	21312499	NM_028066.1	F11	NP_082342.1	ILMN_2609762	004760280	S	2024	CTTGACGTCTCTGATGAAGACACTGGGATACTGACTCTTCCACTGTAACC	8	-	46326694-46326743	8qB1.1	Mus musculus coagulation factor XI (F11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of blood coagulation [goid 30193] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	AI503996; FXI; Cf11; 1600027G01Rik	AI503996; FXI; Cf11; 1600027G01Rik
Mus musculus	MEEBO	ILMN_212147	ILMN_212147	2010111I01RIK	scl072061.9_22	XM_127387.4			38074738	XM_127387.4	2010111I01Rik		ILMN_2623255	000610338	S	2078	CTGGGCCATGGGATTGCCCTGCTTCTGGACAATGAAGGAAGCCAAGATGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISS]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence ISS]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence ISS]		
Mus musculus	RefSeq	ILMN_196878	ILMN_314496	LOC100045342	XR_030763.1	XR_030763.1		100045342	149274540	XR_030763.1	LOC100045342		ILMN_1218634	004920332	S	770	GTGACAGTAATTTCCTCAACACATTGGCCTGCAGCCTGGCCCTTACAGCC					PREDICTED: Mus musculus hypothetical protein LOC100045342 (LOC100045342), misc RNA.					
Mus musculus	RefSeq	ILMN_210861	ILMN_210861	EPHA7	NM_010141.2	NM_010141.2		13841	34328169	NM_010141.2	Epha7	NP_034271.2	ILMN_1228560	004670148	S	1620	GGCAGGAGCCGGAGCATCCCAATGGAGTCATCACGGAATATGAAATCAAG	4	+	28862917-28862966	4qA4	Mus musculus Eph receptor A7 (Epha7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; The process by which the anatomical structures of branches in a nerve are generated and organized. Morphogenesis pertains to the creation of form. This term refers to an anatomical structure (nerve) not a cell (neuron) [goid 48755] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal [goid 45499] [evidence IDA]	Ebk; Ehk3; Hek11; Cek11; Mdk1	Ebk; Ehk3; Hek11; Cek11; Mdk1
Mus musculus	RefSeq	ILMN_210861	ILMN_210861	EPHA7	NM_010141.2	NM_010141.2		13841	34328169	NM_010141.2	Epha7	NP_034271.2	ILMN_2826671	006250154	S	3874	GTTTGCTGATTGGCAGGTAGTTCAAAATTGCAAGTTGCCAAGAGCTCTGA	4	+	28891798-28891847	4qA4	Mus musculus Eph receptor A7 (Epha7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; The process by which the anatomical structures of branches in a nerve are generated and organized. Morphogenesis pertains to the creation of form. This term refers to an anatomical structure (nerve) not a cell (neuron) [goid 48755] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal [goid 45499] [evidence IDA]	Ebk; Ehk3; Hek11; Cek11; Mdk1	Ebk; Ehk3; Hek11; Cek11; Mdk1
Mus musculus	RefSeq	ILMN_210861	ILMN_210861	EPHA7	NM_010141.2	NM_010141.2		13841	34328169	NM_010141.2	Epha7	NP_034271.2	ILMN_2826669	007050327	S	4176	AGCTCTCCAGCTTTGGCTAACCCAATCCGAGCACATCAAGAGCTTCAGTC	4	+	28892100-28892149	4qA4	Mus musculus Eph receptor A7 (Epha7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; The process by which the anatomical structures of branches in a nerve are generated and organized. Morphogenesis pertains to the creation of form. This term refers to an anatomical structure (nerve) not a cell (neuron) [goid 48755] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal [goid 45499] [evidence IDA]	Ebk; Ehk3; Hek11; Cek11; Mdk1	Ebk; Ehk3; Hek11; Cek11; Mdk1
Mus musculus	MEEBO	ILMN_223960	ILMN_223960	RRM1	scl32275.19.1_102				31982025	NM_009103	Rrm1		ILMN_1258715	002340243	S	2521	TGATGTGTGGATCCTGAGAAAATCAGGGCCTGGGAGACGCAGCGGGCTCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex composed of 2-4 or more subunits, which usually contains nonheme iron and requires ATP for catalysis. Catalyzes the formation of 2'-deoxyribonucleoside diphosphate and thioredoxin disulfide from ribonucleoside diphosphate and thioredoxin [goid 5971] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IPI]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_206886	ILMN_206886	TC10L-PENDING	ri|E030020D03|PX00205G02|AK087019|1830					AK087019	Tc10l-pending		ILMN_1215494	003850356	S	1619	GTGCATTTGCAAGGACCACTGACATGTGTATGTGAGACAGGAAAGCTGGG										
Mus musculus	RefSeq	ILMN_215816	ILMN_215816	SLFN1	NM_011407.1	NM_011407.1		20555	6755567	NM_011407.1	Slfn1	NP_035537.1	ILMN_2663930	003520746	S	1764	AGCTCACTGCTGCTTCATGAGCCCCCTCCAACCTCTTGCTTTTCGTAACA	11	+	82936068-82936117	11qC	Mus musculus schlafen 1 (Slfn1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]		AV316259	AV316259
Mus musculus	RefSeq	ILMN_233543	ILMN_233543	LRRC6	NM_019457.1	NM_019457.1		54562	9506866	NM_019457.1	Lrrc6	NP_062330.1	ILMN_2914714	006450754	S	1223	GCCCAAGGTAGGAGAAATGATCACAGGAGGTCAACGAACACCCACGTCTG	15	-	66228571-66228620	15qD2	Mus musculus leucine rich repeat containing 6 (testis) (Lrrc6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LRTP	LRTP
Mus musculus	RefSeq	ILMN_208620	ILMN_240514	B3GNTL1	NM_178664.3	NM_178664.3		210004	142349568	NM_178664.3	B3gntl1	NP_848779.1	ILMN_2588121	001470093	S	2095	CCTACCTAGCTGGGATGTCTCGCCCTGAGGCTCCACAACAAGCTTTACCA	11	-	121478216-121478265	11qE2	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 (B3gntl1), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	6030413G23Rik; MGC113804; MGC159329	6030413G23Rik; MGC113804; MGC159329
Mus musculus	RefSeq	ILMN_215439	ILMN_215439	SVIL	NM_153153.1	NM_153153.1		225115	23346600	NM_153153.1	Svil	NP_694793.1	ILMN_2659523	004260044	S	3048	CAGGCCTCAGAGGAGAACACAGATGTGGAAACTGTCATGAGGAAGTTCTC	18	+	5063727-5063768:5064469-5064476	18qA1	Mus musculus supervillin (Svil), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	B430302E16Rik; AU024053	B430302E16Rik; AU024053
Mus musculus	RefSeq	ILMN_215439	ILMN_215439	SVIL	NM_153153.1	NM_153153.1		225115	23346600	NM_153153.1	Svil	NP_694793.1	ILMN_1243373	007050634	S	2213	TGGGGTCACCCACCCTGTAACGGCGAGACTTCCTAGCCCCACTGTAGCTA	18	+	5060553-5060602	18qA1	Mus musculus supervillin (Svil), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	B430302E16Rik; AU024053	B430302E16Rik; AU024053
Mus musculus	RefSeq	ILMN_215439	ILMN_215439	SVIL	NM_153153.1	NM_153153.1		225115	23346600	NM_153153.1	Svil	NP_694793.1	ILMN_1224247	004290086	S	6249	ATTCATGCTGGGCTAGAGCCCCTGACATTCACCAACATGTTTCCCAGCTG	18	+	5117025-5117074	18qA1	Mus musculus supervillin (Svil), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	B430302E16Rik; AU024053	B430302E16Rik; AU024053
Mus musculus	RefSeq	ILMN_215439	ILMN_215439	SVIL	NM_153153.1	NM_153153.1		225115	23346600	NM_153153.1	Svil	NP_694793.1	ILMN_1240861	004210678	S	1420	TCGATGTAGAATCTGAGAGGGAGCGGCAAGTTCAACACCTGCCCACTCAG	18	+	5056497-5056546	18qA1	Mus musculus supervillin (Svil), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	B430302E16Rik; AU024053	B430302E16Rik; AU024053
Mus musculus	RefSeq	ILMN_215706	ILMN_215439	SVIL	NM_153153.1	NM_153153.1		225115	23346600	NM_153153.1	Svil	NP_694793.1	ILMN_2662644	000270242	S	451	CTCGATATGCCAAGTCTCGGAAGGACCCAGATGTGACTGAGAGACGAGGA	18	+	5049124-5049173	18qA1	Mus musculus supervillin (Svil), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	B430302E16Rik; AU024053	B430302E16Rik; AU024053
Mus musculus	RefSeq	ILMN_215439	ILMN_215439	SVIL	NM_153153.1	NM_153153.1		225115	23346600	NM_153153.1	Svil	NP_694793.1	ILMN_2675800	003360291	S	6128	AAACAAGATAACCGGCTCTGCCCGCATTCGCTGGGCCTCAGACCGGAAGA	18	+	5116053-5116102	18qA1	Mus musculus supervillin (Svil), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	B430302E16Rik; AU024053	B430302E16Rik; AU024053
Mus musculus	RefSeq	ILMN_242514	ILMN_242514	ACD	NM_001012638.1	NM_001012638.1		497652	60593058	NM_001012638.1	Acd	NP_001012656.1	ILMN_2930819	003130347	S	1318	CCCAGGTATGAGGAGTCACTGGGACATAGCAGAGGACACATGGGCTGACG	8	-	108222116-108222155:108222156-108222165	8qD3	Mus musculus adrenocortical dysplasia (Acd), mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex of DNA and protein located at the end of a linear chromosome in the nucleus that protects and stabilizes a linear chromosome [goid 783] [evidence ISO]	The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence ISO]; The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis [goid 35282] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_206085	ILMN_242514	ACD	NM_001012638.1	NM_001012638.1		497652	60593058	NM_001012638.1	Acd	NP_001012656.1	ILMN_1219304	000130333	S	236	GGCCGTGTTACTTGTGTCAGACGGAACCCACAGTGTCCGATGCGTGGTGA	8	-	108224630-108224679	8qD3	Mus musculus adrenocortical dysplasia (Acd), mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex of DNA and protein located at the end of a linear chromosome in the nucleus that protects and stabilizes a linear chromosome [goid 783] [evidence ISO]	The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence ISO]; The regionalization process that divides an organism or part of an organism into a series of semi-repetitive parts, or segments, often arranged along a longitudinal axis [goid 35282] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_202328	ILMN_202328	4930515K21RIK	ri|4930515K21|PX00033E08|AK015797|1750					AK015797	4930515K21Rik		ILMN_2548754	002260747	S	1321	TGGAGGTCATGGGTTGCAGGTTCTACCATGCTGCTTCCATTGCAGCCCGG										
Mus musculus	RefSeq	ILMN_212012	ILMN_212012	IRF5	NM_012057.3	NM_012057.3		27056	146134441	NM_012057.3	Irf5	NP_036187.1	ILMN_2621752	003140646	S	1811	CATCACTAGCCTGAGGCCTTTAGTACCACGGAGTCCAATTACCCCAGGGT				6qA3.3	Mus musculus interferon regulatory factor 5 (Irf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	mirf5; AW491843	mirf5; AW491843
Mus musculus	RefSeq	ILMN_217248	ILMN_256204	ATP11B	NM_029570.3	NM_029570.3		76295	62632753	NM_029570.3	Atp11b	NP_083846.2	ILMN_1234195	002320441	S	1167	GAAATATACCTGGCAAGCTGAAGAAAAATGGGATGAACCTTGGTATAACC	3	+	35704725-35704774	3qB	Mus musculus ATPase, class VI, type 11B (Atp11b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	1110019I14Rik; mKIAA0956; ATPIR; ATPIF	1110019I14Rik; mKIAA0956; ATPIR; ATPIF
Mus musculus	RefSeq	ILMN_217248	ILMN_256204	ATP11B	NM_029570.3	NM_029570.3		76295	62632753	NM_029570.3	Atp11b	NP_083846.2	ILMN_1257807	004920088	S	4575	TTGCATGCTTCAACCTGGCTAATATATTTAAATCCACCGCATCTCTCCTC	3	+	35754909-35754958	3qB	Mus musculus ATPase, class VI, type 11B (Atp11b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	1110019I14Rik; mKIAA0956; ATPIR; ATPIF	1110019I14Rik; mKIAA0956; ATPIR; ATPIF
Mus musculus	MEEBO	ILMN_218211	ILMN_218211	2810410P22RIK	scl0075423.2_59	NM_182994.1			33695143	NM_182994.1	2810410P22Rik		ILMN_2692986	003170131	S	3898	GGTAAAGACAGGGTTTCCTTACTTAACGGATTTGAGCGCTTCTGTTCTCC										
Mus musculus	MEEBO	ILMN_218211	ILMN_218211	2810410P22RIK	scl0075423.2_59	NM_182994.1			33695143	NM_182994.1	2810410P22Rik		ILMN_2692989	006940494	S	3893	GGTGAGGTAAAGACAGGGTTTCCTTACTTAACGGATTTGAGCGCTTCTGT										
Mus musculus	Riken	ILMN_202503	ILMN_202503	CBLC	ri|2310016M15|ZX00059O09|AK009399|1058					AK009399	Cblc		ILMN_1245110	004180739	S	1	TGGGTCCCAAGCCACCCGAGGGACCCATGGCTGCGGCGGCAGCCCCGCGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence ISO]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISO]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215043	ILMN_215043	SERBP1	NM_025814.1	NM_025814.1		66870	13385279	NM_025814.1	Serbp1	NP_080090.1	ILMN_2931900	001980601	S	2886	GACTTGAGCTGGTGGCTTACATGTTCTGTATTAGTGCTGCTTGAAGTTTT	6	+	67235497-67235546	6qC1	Mus musculus Serpine1 mRNA binding protein 1 (Serbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Pairbp1; 9330147J08Rik; 1200009K13Rik; AL022786	Pairbp1; 9330147J08Rik; 1200009K13Rik; AL022786
Mus musculus	RefSeq	ILMN_215043	ILMN_215043	SERBP1	NM_025814.1	NM_025814.1		66870	13385279	NM_025814.1	Serbp1	NP_080090.1	ILMN_2683071	000380184	S	1175	CAACTGGAGATCAATTTTGGAGACTTAGGCCGCCCAGGACGTGGTGGCAG	6	+	67231705-67231754	6qC1	Mus musculus Serpine1 mRNA binding protein 1 (Serbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Pairbp1; 9330147J08Rik; 1200009K13Rik; AL022786	Pairbp1; 9330147J08Rik; 1200009K13Rik; AL022786
Mus musculus	RefSeq	ILMN_215043	ILMN_215043	SERBP1	NM_025814.1	NM_025814.1		66870	13385279	NM_025814.1	Serbp1	NP_080090.1	ILMN_1237677	003370010	S	2960	GAGGCAAGGATTAGTCCATTTAGACTTGGTGACCCCTTTGAGATTGTAGC	6	+	67235571-67235620	6qC1	Mus musculus Serpine1 mRNA binding protein 1 (Serbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Pairbp1; 9330147J08Rik; 1200009K13Rik; AL022786	Pairbp1; 9330147J08Rik; 1200009K13Rik; AL022786
Mus musculus	MEEBO	ILMN_209580	ILMN_209580	B330003H21	scl44290.2.1_103	NM_183202.1			34147261	NM_183202.1	B330003H21		ILMN_1248649	002030402	S	3529	GTTACATGTGTGATAAAAACTTAAAAGGTCACAGAAATCCCCAAATTAAG										
Mus musculus	RefSeq	ILMN_197402	ILMN_245660	LOC675056	XR_004725.1	XR_004725.1		675056	94396642	XR_004725.1	LOC675056		ILMN_1215601	004260039	S	1387	GGTGTGAGTTCTCTGTGTTCAGTGTGAATAACGACTGGATGAGTGTGAAG					PREDICTED: Mus musculus similar to SKD1 (LOC675056), misc RNA.					
Mus musculus	RefSeq	ILMN_200709	ILMN_247736	EG545886	XM_622400.4	XM_622400.4		545886	149255376	XM_622400.4	EG545886	XP_622400.2	ILMN_1236364	003060307	S	227	GTCTTCTGCCAACTCTGGGAGTGAACAGGAACAGCAACAGCAAGCTCAGG	6	-	133715564-133715613	6qG1	PREDICTED: Mus musculus predicted gene, EG545886 (EG545886), mRNA.					
Mus musculus	RefSeq	ILMN_221400	ILMN_221400	2210412D01RIK	NM_133722.1	NM_133722.1		70178	19526905	NM_133722.1	2210412D01Rik	NP_598483.1	ILMN_1217822	000050608	S	1923	TTACCCTAAGCTGATCTCTTAGTTTAGGAGTTATTTGGGTTTTGACACTG	7	-	91258131-91258180	7qD3	Mus musculus RIKEN cDNA 2210412D01 gene (2210412D01Rik), mRNA.				AL023007	AL023007
Mus musculus	RefSeq	ILMN_213823	ILMN_213823	ZFP446	NM_175558.3	NM_175558.3		269870	141803275	NM_175558.3	Zfp446	NP_780767.1	ILMN_2641160	000630296	S	736	CTCCAAGGCAGGCCTTGCGGAGGCACCGCTGAAGGCCGGGATAGATCGAT	7	+	13564889-13564938	7qA1	Mus musculus zinc finger protein 446 (Zfp446), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AV306632; A930031C22; A630035I11Rik; AA120513	AV306632; A930031C22; A630035I11Rik; AA120513
Mus musculus	RefSeq	ILMN_213823	ILMN_213823	ZFP446	NM_175558.3	NM_175558.3		269870	141803275	NM_175558.3	Zfp446	NP_780767.1	ILMN_2726595	006220746	S	2958	GTTTAAGACAGTCTCACTTTAATGCCCTCAAACTATCTGTAGTCCTTCAA	7	+	13569406-13569455	7qA1	Mus musculus zinc finger protein 446 (Zfp446), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AV306632; A930031C22; A630035I11Rik; AA120513	AV306632; A930031C22; A630035I11Rik; AA120513
Mus musculus	RefSeq	ILMN_215375	ILMN_215375	FOXI1	NM_023907.2	NM_023907.2		14233	24475696	NM_023907.2	Foxi1	NP_076396.2	ILMN_2722232	005550279	S	1697	CTGGTTACGGCAAATGCACGCACACTCCCCACTGGCTTCTAGTGATGCTC	11	-	34104948-34104997	11qA4	Mus musculus forkhead box I1 (Foxi1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	HFH-3; 5830401E05Rik; Hfh3; Fkh10; FREAC6	HFH-3; 5830401E05Rik; Hfh3; Fkh10; FREAC6
Mus musculus	RefSeq	ILMN_215375	ILMN_215375	FOXI1	NM_023907.2	NM_023907.2		14233	24475696	NM_023907.2	Foxi1	NP_076396.2	ILMN_3000416	001660324	S	1971	CCCTGAACCCTCACCCAAGTACTGCCCACCCACAAAATCTCATAACCACC	11	-	34104674-34104723	11qA4	Mus musculus forkhead box I1 (Foxi1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	HFH-3; 5830401E05Rik; Hfh3; Fkh10; FREAC6	HFH-3; 5830401E05Rik; Hfh3; Fkh10; FREAC6
Mus musculus	MEEBO	ILMN_187095	ILMN_187095	TRIM24	scl30200.21.1_7	NM_145076.1			34328066	NM_145076.1	Trim24		ILMN_1249746	004890360	S	20	TGGCTGCCACACGAAGGGGTAGGTGCAGAAATGTCACTGAGAATGGTATC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively, in a ligand dependent manner, with a nuclear receptor protein [goid 16922] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218096	ILMN_218096	NRIP2	NM_021717.1	NM_021717.1		60345	33468976	NM_021717.1	Nrip2	NP_068363.1	ILMN_2816690	003130451	S	862	AGACTGTGGCATGCTCGGCCCAGGTGGTGGATGTGGACAGCCCTGAATTT	6	+	128357464-128357493:128357704-128357723	6qF3	Mus musculus nuclear receptor interacting protein 2 (Nrip2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	NIX1; MGC144354; AW491344	NIX1; MGC144354; AW491344
Mus musculus	RefSeq	ILMN_192472	ILMN_192472	ZC3H8	NM_020594.2	NM_020594.2		57432	85719325	NM_020594.2	Zc3h8	NP_065619.2	ILMN_1253864	004560706	S	1356	GCTAGGGGGTTATTTATTGGGGTAACAAATAAGTCACACCTCTACGTGTC	2	-	128752165-128752214	2qF1	Mus musculus zinc finger CCCH type containing 8 (Zc3h8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Fliz1; E130108N08Rik; Zc3hdc8; AU020882	Fliz1; E130108N08Rik; Zc3hdc8; AU020882
Mus musculus	Riken	ILMN_204732	ILMN_204732	SEMA4F	ri|B930015M09|PX00163M23|AK047067|2855					AK047067	Sema4f		ILMN_1234391	006550630	S	2719	CCACCCCTTCCACCACTGCTGCCTGACCAACACTGTTTTTAATGACTTCG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence ISA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence ISA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216250	ILMN_216250	1500032D16RIK	NM_030087.1	NM_030087.1		78330	33859743	NM_030087.1	1500032D16Rik	NP_084363.1	ILMN_3008277	000450161	S	1361	GCAGCACCATGACTACAACACATACACCTTCCTGGACCTGAACCTGGACC	17	+	31259860-31259909	17qB1	Mus musculus RIKEN cDNA 1500032D16 gene (1500032D16Rik), mRNA.					
Mus musculus	MEEBO	ILMN_194268	ILMN_194268	4930430J02RIK	scl36907.3.1_167						4930430J02Rik		ILMN_1236018	006940594	S	1	GCCCTGACCATGCTAAGTTATGCATACCTGCTGTTAGGGTTTGAAAACCA										
Mus musculus	RefSeq	ILMN_218981	ILMN_218981	CRELD1	NM_133930.1	NM_133930.1		171508	19527147	NM_133930.1	Creld1	NP_598691.1	ILMN_1232170	005090411	S	1960	GTGTATTCACCGCCCACGCCCTAGCCATCGACTTATTTATTCATCTCAGG	6	+	113443258-113443307	6qE3	Mus musculus cysteine-rich with EGF-like domains 1 (Creld1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI843811	AI843811
Mus musculus	RefSeq	ILMN_217155	ILMN_242932	C530044N13RIK	NM_146067.3	NM_146067.3		223978	142351105	NM_146067.3	C530044N13Rik	NP_666179.2	ILMN_1255438	006380193	S	2557	CCCTGTGGGGCCTGCTGATGTGGGGAGCAAAAGTGTGTAATCTATGTAAC	16	-	11803870-11803919	16qA1	Mus musculus RIKEN cDNA C530044N13 gene (C530044N13Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC27760	MGC27760
Mus musculus	RefSeq	ILMN_211617	ILMN_211617	PDLIM2	NM_145978.1	NM_145978.1		213019	22122422	NM_145978.1	Pdlim2	NP_666090.1	ILMN_2764732	000520164	S	543	TCTGACACACTCTCCAGGCCTTGCTGCTGCTCACCACTTGACCTACCCTG	14	-	70571046-70571095	14qD2	Mus musculus PDZ and LIM domain 2 (Pdlim2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC37634; mystique; Slim	MGC37634; mystique; Slim
Mus musculus	RefSeq	ILMN_211617	ILMN_211617	PDLIM2	NM_145978.1	NM_145978.1		213019	22122422	NM_145978.1	Pdlim2	NP_666090.1	ILMN_2880906	005260204	S	1245	GTCCTTGCTGGGTGAGGCCAAGGGTTGGGACTAATGTCAGGTTGCTAGTG	14	-	70564244-70564293	14qD2	Mus musculus PDZ and LIM domain 2 (Pdlim2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC37634; mystique; Slim	MGC37634; mystique; Slim
Mus musculus	RefSeq	ILMN_211617	ILMN_211617	PDLIM2	NM_145978.1	NM_145978.1		213019	22122422	NM_145978.1	Pdlim2	NP_666090.1	ILMN_1221178	006420639	S	749	AGGGACGGGCCGCCCCAAGGCAGTCCAGCTCTTTTCGACTCTTACAGGAA	14	-	70567489-70567538	14qD2	Mus musculus PDZ and LIM domain 2 (Pdlim2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC37634; mystique; Slim	MGC37634; mystique; Slim
Mus musculus	RefSeq	ILMN_211617	ILMN_211617	PDLIM2	NM_145978.1	NM_145978.1		213019	22122422	NM_145978.1	Pdlim2	NP_666090.1	ILMN_2619767	004560743	S	887	TGGCCACTCCACCCAAGCTCCACACCTGTGAGAAATGCAGCGTCAACATC	14	-	70565898-70565947	14qD2	Mus musculus PDZ and LIM domain 2 (Pdlim2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC37634; mystique; Slim	MGC37634; mystique; Slim
Mus musculus	RefSeq	ILMN_196350	ILMN_224505	BC066140	XM_923645.2	XM_923645.2		233826	94381257	XM_923645.2	BC066140	XP_928738.1	ILMN_1223765	006900093	S	2986	GCCAGAAGAGGCGTCAGATTCCCGAGATTAGAGTGCAGGTGGCCGGGAGT				7qF3	PREDICTED: Mus musculus cDNA sequence BC066140, transcript variant 9 (BC066140), mRNA.					
Mus musculus	RefSeq	ILMN_200816	ILMN_200816	GM1140	XM_356330.3	XM_356330.3		382217	94407518	XM_356330.3	Gm1140	XP_356330.3	ILMN_2540110	007200577	S	262	GATGTAGTAACTTCTGTTAAGCGCCTGAGTGAAAAACTTGTCAGCATTTA	X	-	64944021-64944070	XqA7.1	PREDICTED: Mus musculus gene model 1140, (NCBI) (Gm1140), mRNA.					
Mus musculus	RefSeq	ILMN_211347	ILMN_211347	HDAC11	NM_144919.2	NM_144919.2		232232	118130074	NM_144919.2	Hdac11	NP_659168.1	ILMN_2614912	005090079	S	2262	CTGGACCAGACCCCACAGTACTAATAGTGCAGCACCACACCCCTCTGTCA	6	+	91124445-91124494	6qD1	Mus musculus histone deacetylase 11 (Hdac11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC27683	MGC27683
Mus musculus	RefSeq	ILMN_197755	ILMN_197755	LOC223653	XM_147965.2	XM_147965.2			28486524	XM_147965.2	LOC223653		ILMN_2529254	000430300	S	864	GGGGGGACCTGCCCCCCTATCTTTGACACTCTGTGCTGTAATCTTAAGTC										
Mus musculus	RefSeq	ILMN_225933	ILMN_225933	LOC100034363	NM_001080967.2	NM_001080967.2		100034363	126723624	NM_001080967.2	LOC100034363	NP_001074436.1	ILMN_2909163	005090132	S	181	ATACTGAAGTAAAAAATACTCTTCCGTCGAATGAAAACAAGATGAGCGAT	X	-	133490012-133490021:133491274-133491313	XqF1	Mus musculus similar to thymosin beta-like protein (LOC100034363), mRNA.					
Mus musculus	RefSeq	ILMN_211782	ILMN_211782	ARFIP2	NM_029802.3	NM_029802.3		76932	141803130	NM_029802.3	Arfip2	NP_084078.2	ILMN_2619491	006590253	S	1245	TGGGATGTCCTTTGCCACTTACTTGCTGGCTTGGGCTCGTTTTTTCTGAC	7	-	112784628-112784677	7qE3	Mus musculus ADP-ribosylation factor interacting protein 2 (Arfip2), mRNA.				POR; Por1; 2310002N04Rik	POR; Por1; 2310002N04Rik
Mus musculus	RefSeq	ILMN_211782	ILMN_211782	ARFIP2	NM_029802.3	NM_029802.3		76932	141803130	NM_029802.3	Arfip2	NP_084078.2	ILMN_1233495	006270286	S	543	TGCGTGAGACGAAGCGCAAGTATGAAAGTGTCCTGCAGCTGGGCCGGGCA	7	-	112786422-112786471	7qE3	Mus musculus ADP-ribosylation factor interacting protein 2 (Arfip2), mRNA.				POR; Por1; 2310002N04Rik	POR; Por1; 2310002N04Rik
Mus musculus	MEEBO	ILMN_217683	ILMN_217683	BUB1B	scl20444.23.1_130				6753211	NM_009773	Bub1b		ILMN_2774007	002350095	S	3400	GAGCACACTTAGACACATCAGCAGTCCTTCACTAGGGGTCACTCTCAGTA						A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]; The region of a condensed chromosome kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions [goid 940] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211300	ILMN_211300	EGFR	scl0001412.1_13	NM_207655.1			46560581	NM_207655.1	Egfr		ILMN_2614432	005090372	S	3475	TTGCAGCGGTACAGCTCCGACCCCACAGGTGCTGTAACAGAGGACAACAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence ISO]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IGI]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISO]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [evidence IDA]		
Mus musculus	RefSeq	ILMN_257602	ILMN_257602	DYNC1LI2	NM_001013380.1	NM_001013380.1		234663	62945389	NM_001013380.1	Dync1li2	NP_001013398.1	ILMN_3161897	000520528	S	2748	CCTGGTCGGATCATTGCTGTCAGACCGACAGGTGGGTGCTTTCCATGGAG	8	-	106943367-106943416	8qD3	Mus musculus dynein, cytoplasmic 1 light intermediate chain 2 (Dync1li2), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C920003I06; Dncli2; LIC2; Dnclic2; AA409702	C920003I06; Dncli2; LIC2; Dnclic2; AA409702
Mus musculus	RefSeq	ILMN_194439	ILMN_225797	KY	NM_024291.3	NM_024291.3		16716	114145524	NM_024291.3	Ky	NP_077253.3	ILMN_2506428	006940010	S	5324	AGTAAAGCCGCAGAGGTGACTATTTCTCCCCGTGTGTGCTGAGTAGTGTG	9	+	102448444-102448493	9qF1	Mus musculus kyphoscoliosis peptidase (Ky), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	D9Mgc44e; CD1	D9Mgc44e; CD1
Mus musculus	RefSeq	ILMN_204567	ILMN_225797	KY	NM_024291.3	NM_024291.3		16716	114145524	NM_024291.3	Ky	NP_077253.3	ILMN_1221382	001820259	S	2046	GGCCCAAGCTAAGAGCAGAGAGCCCAGGACACCACTAATCTGCATGAAAC	9	+	102445166-102445215	9qF1	Mus musculus kyphoscoliosis peptidase (Ky), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	D9Mgc44e; CD1	D9Mgc44e; CD1
Mus musculus	RefSeq	ILMN_225797	ILMN_225797	KY	NM_024291.3	NM_024291.3		16716	114145524	NM_024291.3	Ky	NP_077253.3	ILMN_2906855	002940470	S	5328	AAGCCGCAGAGGTGACTATTTCTCCCCGTGTGTGCTGAGTAGTGTGGGCC	9	+	102448448-102448497	9qF1	Mus musculus kyphoscoliosis peptidase (Ky), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	D9Mgc44e; CD1	D9Mgc44e; CD1
Mus musculus	MEEBO	ILMN_194886	ILMN_194886	IGHV15S1_U39293_IG_HEAVY_VARIABLE_15S1_164	IGHV15S1_U39293_Ig_heavy_variable_15S1_164						IGHV15S1_U39293_Ig_heavy_variable_15S1_164		ILMN_2510526	005690204	S	6	GGCAGAAGCCTGGGCATGGATTTGAATGGATTGGAGACATACTCCCAAGT										
Mus musculus	RefSeq	ILMN_206591	ILMN_220616	FBF1	NM_172571.3	NM_172571.3		217335	144922652	NM_172571.3	Fbf1	NP_766159.3	ILMN_1242796	005910201	S	695	CTTCAGCCTCCCAAGTGCTGGGATTGCAGGGAAGATGAGCTTGCTGGGCA	11	-	116027205-116027226:116028447-116028474	11qE2	Mus musculus Fas (TNFRSF6) binding factor 1 (Fbf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			1110033G01Rik; RP23-42F6.10; mKIAA1863; 5930413D20	1110033G01Rik; RP23-42F6.10; mKIAA1863; 5930413D20
Mus musculus	RefSeq	ILMN_220616	ILMN_220616	FBF1	NM_172571.3	NM_172571.3		217335	144922652	NM_172571.3	Fbf1	NP_766159.3	ILMN_2724451	003120563	S	5102	CCCTCTAGTAGGGTATCAGGAGACGGCCTCGGAAGGGAAATGATCCAGCA	11	-	116003820-116003869	11qE2	Mus musculus Fas (TNFRSF6) binding factor 1 (Fbf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			1110033G01Rik; RP23-42F6.10; mKIAA1863; 5930413D20	1110033G01Rik; RP23-42F6.10; mKIAA1863; 5930413D20
Mus musculus	MEEBO	ILMN_223939	ILMN_223939	ROBO3	scl019649.2_21				7106392	NM_011248	Robo3		ILMN_1247463	005810309	S	4631	CGCTGGTAGCAATTCTTCTAGGGGTTCCAACAGCTCTCGAGGTTCTCGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_219349	ILMN_219349	PCDHGA5	NM_033588.4	NM_033588.4		93713	148539910	NM_033588.4	Pcdhga5	NP_291066.1	ILMN_1215224	003830047	S	2325	TGCTGACAGGCTCATTAGTGAAGAGAGCTGTGAGAAGAGTGAGCCTCTTC				18qB3	Mus musculus protocadherin gamma subfamily A, 5 (Pcdhga5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_208824	ILMN_208824	RBBP4	scl23784.13_65				47059483	NM_009030	Rbbp4		ILMN_1235327	005860608	S	1523	ACCGGTGAATCTTAACTGGGGGTTTAAGTCAGCAAAGCCTCGTTGGTGGC						An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220229	ILMN_227136	1500031H01RIK	XM_622593.3	XM_622593.3		207740	94400357	XM_622593.3	1500031H01Rik	XP_622593.1	ILMN_2719431	006020041	S	810	CCTCACCATGTTCTCCCGTCTCAAGGCCTCTGAAAGCTTCCACGGGGGTG				16qA1	PREDICTED: Mus musculus RIKEN cDNA 1500031H01 gene (1500031H01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220229	ILMN_227136	1500031H01RIK	XM_622593.3	XM_622593.3		207740	94400357	XM_622593.3	1500031H01Rik	XP_622593.1	ILMN_2767126	007050500	S	842	AAAGCTTCCACGGGGGTGGCGGCAGCAGCAGCCCAATGGCCACGTCGGCC				16qA1	PREDICTED: Mus musculus RIKEN cDNA 1500031H01 gene (1500031H01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213808	ILMN_213808	ABCG8	NM_026180.2	NM_026180.2		67470	24475677	NM_026180.2	Abcg8	NP_080456.1	ILMN_2789904	000650438	S	3532	GCACACGGTTGGCTCCCAGTTGCTGCGTGCTGTTGACTCTGATTGCCTGA	17	+	85099548-85099597	17qE4	Mus musculus ATP-binding cassette, sub-family G (WHITE), member 8 (Abcg8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of sterol within an organism or cell [goid 55092] [evidence IMP]; The directed movement of sterols into, out of, within or between cells. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 15918] [evidence IMP]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	1300003C16Rik; Sterolin-2; sterolin 2; AI114946	1300003C16Rik; Sterolin-2; sterolin 2; AI114946
Mus musculus	RefSeq	ILMN_247036	ILMN_247036	ABCE1	NM_015751.2	NM_015751.2		24015	114205430	NM_015751.2	Abce1	NP_056566.2	ILMN_2982652	001340241	S	3370	CTGGAATTATGAGGAAGGTGGATTACAATGAACAGGGCAGGCAGAACAGG	8	-	82207734-82207783	8qC2	Mus musculus ATP-binding cassette, sub-family E (OABP), member 1 (Abce1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	C79080; Rnaseli; Oabp; RNS41; RLI	C79080; Rnaseli; Oabp; RNS41; RLI
Mus musculus	RefSeq	ILMN_194599	ILMN_247036	ABCE1	NM_015751.2	NM_015751.2		24015	114205430	NM_015751.2	Abce1	NP_056566.2	ILMN_2507861	002850279	S	3714	ATCCACCTTAATGCTAATGACAATATGTGAATAAGAGTATTTTTGTGCAA	8	-	82207390-82207439	8qC2	Mus musculus ATP-binding cassette, sub-family E (OABP), member 1 (Abce1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	C79080; Rnaseli; Oabp; RNS41; RLI	C79080; Rnaseli; Oabp; RNS41; RLI
Mus musculus	RefSeq	ILMN_212407	ILMN_212407	CMTM6	NM_026036.3	NM_026036.3		67213	146134938	NM_026036.3	Cmtm6	NP_080312.1	ILMN_1226069	006380044	S	2972	CTGGTTGGCTTTTGCATTCTATGGAGGGAGATGGGGTTAAAGACTGTGGC				9qF3	Mus musculus CKLF-like MARVEL transmembrane domain containing 6 (Cmtm6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	AA536733; 2810051A14Rik; Cklfsf6	AA536733; 2810051A14Rik; Cklfsf6
Mus musculus	RefSeq	ILMN_214845	ILMN_214845	HSD3B1	NM_008293.3	NM_008293.3		15492	142387492	NM_008293.3	Hsd3b1	NP_032319.1	ILMN_2652602	000360463	S	1719	ATTACAATTTACTTTCACTTAGAACTTAGTATTGCTTTTATTTCCCCCTT	3	-	98656203-98656252	3qF2.2	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 (Hsd3b1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid [goid 4769] [evidence IEA]	D3Ertd383e	D3Ertd383e
Mus musculus	Riken	ILMN_205203	ILMN_205203	D030005C18RIK	ri|D030005C18|PX00179K08|AK050697|1717					AK050697	D030005C18Rik		ILMN_2570776	006510242	S	996	ATGGGTTCAGGGAACTGAACTTGGGTCCTCGGGAAGAGCAGCAGTGCTCC										
Mus musculus	Riken	ILMN_207110	ILMN_207110	1200008A14RIK	ri|6720462A07|PX00649F09|AK078433|3671					AK078433	1200008A14Rik		ILMN_2585112	007380730	S	3496	GATGCCCTAGACTCAGAATTGCAAATAGTTGTGAGCTGCCATGTGGGTGG										
Mus musculus	MEEBO	ILMN_212321	ILMN_212321	CX3CR1	scl35213.3_207	NM_009987.2			31542433	NM_009987.2	Cx3cr1		ILMN_2625125	006620376	S	2750	ACGGCGGCATGTCTGATATCTCCTTGGCAGTCTGTATGTTTGTGTCGAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with chemokines, small chemoattractant molecules normally used to stimulate leukocytes, to initiate a change in cell activity [goid 4950] [evidence IEA]		
Mus musculus	Riken	ILMN_204278	ILMN_204278	9630025O15RIK	ri|9630025O15|PX00115J20|AK035999|2127					AK035999	9630025O15Rik		ILMN_1213086	006940192	S	1966	CACGTACACGGACCGGTGAGATGTCCTGATGTGCAAATGCCTCTGCCACC										
Mus musculus	MEEBO	ILMN_222788	ILMN_222788	2610301K12RIK	scl072477.16_0	XM_130410.4			38075656	XM_130410.4	2610301K12Rik		ILMN_1237528	005960162	S	1518	ACTAAGAGCCTCAAAAACGGTTTCAAACGGAACAGCTAAACCTACGTCTG										
Mus musculus	RefSeq	ILMN_214709	ILMN_214709	OAS3	NM_145226.2	NM_145226.2		246727	118130089	NM_145226.2	Oas3	NP_660261.1	ILMN_1216020	004890689	S	4203	TCTAGTCTGCTGTTCATCTACCATGGGCTCTGCCCCAACTTCCACAGCCC	5	-	121203572-121203621	5qF	Mus musculus 2'-5' oligoadenylate synthetase 3 (Oas3), mRNA.				Oasl10	Oasl10
Mus musculus	RefSeq	ILMN_214709	ILMN_214709	OAS3	NM_145226.2	NM_145226.2		246727	118130089	NM_145226.2	Oas3	NP_660261.1	ILMN_2650991	007550379	S	1749	ATTGAACAGAAGCCCAACGCTCTGCAACTCCAGCTGGCGTCCACCGACCT	5	-	121216053-121216102	5qF	Mus musculus 2'-5' oligoadenylate synthetase 3 (Oas3), mRNA.				Oasl10	Oasl10
Mus musculus	MEEBO	ILMN_222624	ILMN_222624	2210010N04RIK	scl25795.24.1_9	XM_149712.5			38081581	XM_149712.5	2210010N04Rik		ILMN_2752436	006110681	S	3443	AGCCGGGGGACGGTGTGTCGTCGCATGGGTGTCCAGCCTCGGGAGCCCAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222548	ILMN_259070	LOC666337	XM_986137.2	XM_986137.2		666337	149256492	XM_986137.2	LOC666337	XP_991231.1	ILMN_2751259	005870386	S	1690	GGCGTAATCACTTTGAGAGCACATAATTCAGAGTCCATTAGTAGAAAATG	7	-	15879078-15879127	7qA1	PREDICTED: Mus musculus similar to OBOX3, transcript variant 1 (LOC666337), mRNA.					
Mus musculus	RefSeq	ILMN_212044	ILMN_312103	TBX10	NM_011533.1	NM_011533.1		109575	133506835	NM_011533.1	Tbx10	NP_035663.1	ILMN_2622107	000360296	S	1545	CCTGCTGCCTCGAGGATGCCTCCTCTAAATCCTGCTTCGAATGTCCTTCC	19	+	3999436-3999485	19qA	Mus musculus T-box 10 (Tbx10), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Tbx13; MGC129317; MGC129316; Tbx7; Dc	Tbx13; MGC129317; MGC129316; Tbx7; Dc
Mus musculus	MEEBO	ILMN_196281	ILMN_196281	SCL000994.1_0	scl000994.1_0	AK052936.1			26343108	AK052936.1	scl000994.1_0		ILMN_1213912	000010398	S	1	AACATTAAAGCAACCCAATGAAGCCCAGGGCCTGCCTGCACAGTGCTGGC										
Mus musculus	Riken	ILMN_203757	ILMN_203757	A130013J22RIK	ri|A130013J22|PX00121O18|AK037389|2703					AK037389	A130013J22Rik		ILMN_1244984	004560187	S	2415	GGACTAACACCCCACAAAAGAGAATTGGGCTGGGTGTGGTGCTGTACACC										
Mus musculus	MEEBO	ILMN_187380	ILMN_187380	2900026A02RIK	scl26199.2.1_1				27370347	NM_172884	2900026A02Rik		ILMN_2443618	000020255	S	19	CATCCCCTGTCGCCTTACAGAATCTGTTATATGGGGCTCACAGAGGTTGT										
Mus musculus	RefSeq	ILMN_220866	ILMN_220866	TSPO	NM_009775.2	NM_009775.2		12257	31981874	NM_009775.2	Tspo	NP_033905.2	ILMN_2727920	002760544	S	122	TTCATGGGAGCCTACTTTGTACGTGGCGAGGGCCTCCGGTGGTATGCTAG	15	+	83399238-83399287	15qE1	Mus musculus translocator protein (Tspo), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IBP; PBR; Bzrp	IBP; PBR; Bzrp
Mus musculus	RefSeq	ILMN_220866	ILMN_220866	TSPO	NM_009775.2	NM_009775.2		12257	31981874	NM_009775.2	Tspo	NP_033905.2	ILMN_2877069	006270709	S	502	TTGCCACCGTGCTCAACTACTATGTATGGCGTGATAACTCTGGCCGGCGA	15	+	83401653-83401702	15qE1	Mus musculus translocator protein (Tspo), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IBP; PBR; Bzrp	IBP; PBR; Bzrp
Mus musculus	RefSeq	ILMN_216066	ILMN_216066	OLFR1265	NM_146343.1	NM_146343.1		258340	22129611	NM_146343.1	Olfr1265	NP_666455.1	ILMN_1257124	002750402	S	592	GTTGCCAATGCGGGAACTCTGTCAGTGATCAGCTTTGTGGTCCTCTTAGC	2	+	89877669-89877718	2qE1	Mus musculus olfactory receptor 1265 (Olfr1265), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR228-2	MOR228-2
Mus musculus	Riken	ILMN_202063	ILMN_202063	2610528C06RIK	ri|2610528C06|ZX00062D02|AK012163|767					AK012163	2610528C06Rik		ILMN_2546707	004880113	S	1	GATTTTCTGCGCCCCGGCGTTCCAACCTTGAGCGCGCGTTCGTGTTTCTA										
Mus musculus	RefSeq	ILMN_207525	ILMN_207525	1810013L24RIK	XM_358758.1	XM_358758.1			38080164	XM_358758.1	1810013L24Rik		ILMN_2587978	002320048	I	41	GCCGGGGAAGCGCCGCTGGCCAAGTGGGCGGCGCTTTCCAGTCAGCATGT										
Mus musculus	RefSeq	ILMN_217874	ILMN_311560	4930429B21RIK	XR_035269.1	XR_035269.1		67576	149250872	XR_035269.1	4930429B21Rik		ILMN_2688663	007050037	S	1823	GGCCTCTCGGGCCACTGCATGATAACAATCTCCATTCCTCACATGGGACT	3	+	32265906-32265955	3qA3	PREDICTED: Mus musculus RIKEN cDNA 4930429B21 gene (4930429B21Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_207493	ILMN_311560	4930429B21RIK	XR_035269.1	XR_035269.1		67576	149250872	XR_035269.1	4930429B21Rik		ILMN_1260566	001440494	I	268	CACCGATCCCGATCCCGCAGCCATTCGCACAGCCGCCTCGGCGACTCGGT	3	+	32264351-32264400	3qA3	PREDICTED: Mus musculus RIKEN cDNA 4930429B21 gene (4930429B21Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_214809	ILMN_214809	CUX1	NM_198602.2	NM_198602.2		13047	110815858	NM_198602.2	Cux1	NP_941004.2	ILMN_2652187	006270470	S	2527	GTCACTACCCAGTCTGGCATTTCTATAGCCTCTCTTAGGACCCCGCCACA	5	-	136724400-136724449	5qG2	Mus musculus cut-like homeobox 1 (Cux1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Cux1; AA407197; KIAA4047; mKIAA4047; Cux-1; Phox2; Cux; CDP; MGC102214	Cux1; AA407197; KIAA4047; mKIAA4047; Cux-1; Phox2; Cux; CDP; MGC102214
Mus musculus	RefSeq	ILMN_207189	ILMN_221292	E330016A19RIK	NM_173386.3	NM_173386.3		214763	145301618	NM_173386.3	E330016A19Rik	NP_775562.2	ILMN_1239863	007380630	S	3863	GTTGCATGGGTTGTTGCAGGAGCCTTTTCCAGTGGTCTGTAGCTGTTCCC				9qE1	Mus musculus RIKEN cDNA E330016A19 gene (E330016A19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221292	ILMN_221292	E330016A19RIK	NM_173386.3	NM_173386.3		214763	145301618	NM_173386.3	E330016A19Rik	NP_775562.2	ILMN_1246502	002350221	S	3051	TGACGCTCTCATGAAATCTGCCCCCCTCCCCAACTCCTTGACACACACCC				9qE1	Mus musculus RIKEN cDNA E330016A19 gene (E330016A19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_208848	ILMN_208848	GRM3	NM_181850.2	NM_181850.2		108069	118130617	NM_181850.2	Grm3	NP_862898.1	ILMN_1238513	000460725	S	3411	GGGTGAGTTTCTACGTTGTATATTAAAGTTACATTGCGTGTAACAGAACG	5	-	9485311-9485360	5qA1	Mus musculus glutamate receptor, metabotropic 3 (Grm3), mRNA.	A specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, synaptic vesicles, and a specialized cortical cytoskeletal matrix [goid 48786] [evidence NAS]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence TAS]; Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 51930] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A G-protein coupled receptor that is activated by trans-1-aminocyclopentane-1,3-dicarboxylic acid (t-ACPD) and inhibits adenylate cyclase activity [goid 1641] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5246] [evidence IDA]	mGluR3; Gprc1c; 0710001G23Rik	mGluR3; Gprc1c; 0710001G23Rik
Mus musculus	MEEBO	ILMN_196088	ILMN_196088	IGKV12-E_J00546_IG_KAPPA_VARIABLE_12-E_98	IGKV12-e_J00546_Ig_kappa_variable_12-e_98						IGKV12-e_J00546_Ig_kappa_variable_12-e_98		ILMN_2521517	007200593	S	16	TGGTTATTCAGCAGAAACAGGGAAAACCCCCCCAGCTTGGTCTATGCTGC										
Mus musculus	RefSeq	ILMN_196510	ILMN_259287	4921509A18RIK	XM_980994.1	XM_980994.1		70864	94407866	XM_980994.1	4921509A18Rik	XP_986088.1	ILMN_2734745	001740360	S	1374	CTCTCATTTCAAATATTGAACGGAATATATATGATGAAGTTATCACTAAA				XqB	PREDICTED: Mus musculus RIKEN cDNA 4921509A18 gene (4921509A18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196510	ILMN_259287	4921509A18RIK	XM_980994.1	XM_980994.1		70864	94407866	XM_980994.1	4921509A18Rik	XP_986088.1	ILMN_1239898	004560224	S	917	GCAGGAGGCTCAGCAAAGTGAAAGAGATCAGATTCTCCATACAGGAGGCA				XqB	PREDICTED: Mus musculus RIKEN cDNA 4921509A18 gene (4921509A18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213942	ILMN_213942	6330406I15RIK	NM_027519.3	NM_027519.3		70717	146141109	NM_027519.3	6330406I15Rik	NP_081795.1	ILMN_1213736	002650019	S	2098	GGGCCCCTAGTGGCATCTTTTCTGTCCTTCTAAAAACATATTCCCACACT				5qG3	Mus musculus RIKEN cDNA 6330406I15 gene (6330406I15Rik), mRNA.				MGC143803; MGC143804	MGC143803; MGC143804
Mus musculus	Riken	ILMN_201910	ILMN_201910	4933430B08RIK	ri|4933430B08|PX00021A24|AK016988|1097					AK016988	4933430B08Rik		ILMN_1259122	000610474	S	7	AACCACCCGCTACGATTCGGCGCGGTACCGCTACTGGAGCTCTCGGAGGA										
Mus musculus	RefSeq	ILMN_215531	ILMN_215531	PRDX1	NM_011034.4	NM_011034.4		18477	146149207	NM_011034.4	Prdx1	NP_035164.1	ILMN_1223738	001050402	S	824	GGTCTGAGCTGTGTTTTGGGCAGACCAATCTTCTATCAGTCACAGAAAAC				4qD1	Mus musculus peroxiredoxin 1 (Prdx1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; Any process that modulates the frequency, rate or extent of the transfer of NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters, from the cytoplasm into the nucleus, across the nuclear membrane [goid 42345] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors [goid 42267] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process of regulating the production and elimination of erythrocytes within an organism [goid 34101] [evidence IMP]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade [goid 32872] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence ISO]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence ISO]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	PrxI; MSP23; Tdpx2; PAG; OSF-3; Paga; TPx-A; TDX2; NkefA	PrxI; MSP23; Tdpx2; PAG; OSF-3; Paga; TPx-A; TDX2; NkefA
Mus musculus	Riken	ILMN_206334	ILMN_206334	D330036A12RIK	ri|D330036A12|PX00192E08|AK084726|800					AK084726	D330036A12Rik		ILMN_1229140	001660554	S	539	AGGGAAGGCCCTGGAGAAGCCGAGTCTGCCTGTAAAAAAAGCGGTGGTTG										
Mus musculus	RefSeq	ILMN_214388	ILMN_214388	PRKD1	NM_008858.3	NM_008858.3		18760	153945801	NM_008858.3	Prkd1	NP_032884.2	ILMN_2749503	007510500	S	1489	GAGGGTAGTGCAGTCTGTGAAGCACACGAAGCGGAGGAGCAGCACTGTGA				12qB3	Mus musculus protein kinase D1 (Prkd1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	PKD; PKD1; Pkcm	PKD; PKD1; Pkcm
Mus musculus	RefSeq	ILMN_214388	ILMN_214388	PRKD1	NM_008858.3	NM_008858.3		18760	153945801	NM_008858.3	Prkd1	NP_032884.2	ILMN_2647484	000270605	S	3057	CGGTCAGGTTTAACATTTGCCTTGCAGAACTGCCATTATTTTCTGTCAGA				12qB3	Mus musculus protein kinase D1 (Prkd1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	PKD; PKD1; Pkcm	PKD; PKD1; Pkcm
Mus musculus	Riken	ILMN_207391	ILMN_207391	2810403A07RIK	ri|C530033N14|PX00669O22|AK083018|2388					AK083018	2810403A07Rik		ILMN_1257904	000020059	S	2254	TCCTGTCTTCACCTCCCACGTGCTAGAATGACACATCTGACACTGCTCAG										
Mus musculus	RefSeq	ILMN_197697	ILMN_197697	LOC380982	XM_358479.1	XM_358479.1			38077451	XM_358479.1	LOC380982		ILMN_2529046	002970364	S	3	GGGCAAGTTTGTGAACAAGCGAGAGCAAGCACATGCAGACGAAATTAATC										
Mus musculus	MEEBO	ILMN_219449	ILMN_219449	9930014A18RIK	scl47876.3.953_3	NM_177166.2			31342959	NM_177166.2	9930014A18Rik		ILMN_1247954	007550196	S	2227	GTGGTGGCATCCATCACAAGGCATGAGTCAAGCAGAAGCTGGGACCATGG										
Mus musculus	RefSeq	ILMN_220152	ILMN_220152	FKBP5	NM_010220.2	NM_010220.2		14229	31560586	NM_010220.2	Fkbp5	NP_034350.1	ILMN_2718266	004850176	S	3198	GGAAGGTGCCCAGCACCCCTGGATTTTACATGTTCTTGTATTCAGTAATC	17	-	28537188-28537237	17qA3.3	Mus musculus FK506 binding protein 5 (Fkbp5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Dit1; D17Ertd592e; 51kDa; FKBP51	Dit1; D17Ertd592e; 51kDa; FKBP51
Mus musculus	RefSeq	ILMN_218781	ILMN_218781	TAS2R120	NM_207023.1	NM_207023.1		387348	46309594	NM_207023.1	Tas2r120	NP_996906.1	ILMN_2783020	000830411	S	760	GCACCAGTCTTCCTGTTTTGTGTGACAATTGGATCCTTCTACCCAGCAGG	6	+	132607734-132607783	6qG1	Mus musculus taste receptor, type 2, member 120 (Tas2r120), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mGR20; mt2r47; Tas2r20; T2R20	mGR20; mt2r47; Tas2r20; T2R20
Mus musculus	Riken	ILMN_206053	ILMN_206053	D230033G18RIK	ri|D230033G18|PX00189K06|AK051999|3706					AK051999	D230033G18Rik		ILMN_1242521	006590291	S	3311	CGCGTGTGCTGCCACACCCAATTTTTAATGGAATGCAGCAAAAGGAACAC										
Mus musculus	RefSeq	ILMN_218700	ILMN_239279	NLE1	NM_145431.1	NM_145431.1		217011	21703859	NM_145431.1	Nle1	NP_663406.1	ILMN_2712419	005910609	S	615	CACTGGCCACAGCAAATGGATCACAGGCCTGAGCTGGGAGCCCCTTCACA	11	-	82718472-82718486:82718780-82718814	11qC	Mus musculus notchless homolog 1 (Drosophila) (Nle1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an inner cell mass cell [goid 1826] [evidence IMP]		BC018399; AL022765; Nle; MGC25690	BC018399; AL022765; Nle; MGC25690
Mus musculus	RefSeq	ILMN_239279	ILMN_239279	NLE1	NM_145431.1	NM_145431.1		217011	21703859	NM_145431.1	Nle1	NP_663406.1	ILMN_2984434	007380056	S	1611	TTACAGCGTGGAGCTAAGCCATGGGCACTTCCTGGCTAACAGCAGTGGGG	11	-	82714352-82714401	11qC	Mus musculus notchless homolog 1 (Drosophila) (Nle1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an inner cell mass cell [goid 1826] [evidence IMP]		BC018399; AL022765; Nle; MGC25690	BC018399; AL022765; Nle; MGC25690
Mus musculus	RefSeq	ILMN_192069	ILMN_260561	THSD1	NM_019576.1	NM_019576.1		56229	9625040	NM_019576.1	Thsd1	NP_062522.1	ILMN_2759285	005090376	S	2648	CCCTGCTCACATACTTTCTGTGGGCTGCACTGTACAACCGTGGGAATTAG	8	+	23370194-23370243	8qA2	Mus musculus thrombospondin, type I, domain 1 (Thsd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tmtsp; 4833423O18Rik; AW121720	Tmtsp; 4833423O18Rik; AW121720
Mus musculus	RefSeq	ILMN_199246	ILMN_199246	LOC195150	XM_111306.1	XM_111306.1			20342867	XM_111306.1	LOC195150		ILMN_2534556	000990400	S	156	TGATGGTGTAAGGAGGCTGTGCCACATAAGAGGAAAGTTGACAAAAAAGG										
Mus musculus	RefSeq	ILMN_192405	ILMN_241074	TMEM1	XM_990525.1	XM_990525.1		216131	94389413	XM_990525.1	Tmem1	XP_995619.1	ILMN_2510956	005960059	S	3533	CTGCAGCCATGTGTCATGTTCTGGAACACCAGAGAGGCAAGGTCTTAGAC				10qC1	PREDICTED: Mus musculus transmembrane protein 1, transcript variant 2 (Tmem1), mRNA.					
Mus musculus	Riken	ILMN_205517	ILMN_205517	D130047L08RIK	ri|D130047L08|PX00184J14|AK051418|2491					AK051418	D130047L08Rik		ILMN_2573159	005080114	S	2016	CCAACCTCACTTTTTCATCCAAGCCTCTAGCCCAAGCACAGTCTTGCTGC										
Mus musculus	RefSeq	ILMN_198557	ILMN_198557	LOC232993	XM_133252.3	XM_133252.3			38086155	XM_133252.3	LOC232993		ILMN_1254002	004880047	S	904	GGGTGTGACAGTTGGTGCTTCTTTAATGATACCTGCCTTGATCCGCACAG										
Mus musculus	Riken	ILMN_205235	ILMN_205235	ARVCF	ri|E130315O14|PX00209M12|AK053865|1605					AK053865	Arvcf		ILMN_1257452	000650133	S	1442	CACCAGACCCTGTCGCCCTGGTTCCTAAACTGGAGCTTGTGCCTTGGAGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_201473	ILMN_201473	LOC385231	XM_358132.1	XM_358132.1			38094044	XM_358132.1	LOC385231		ILMN_1252909	005890603	S	222	GATACCCAGTGCCCTCCGGCTGCGCCCACACCTGGGAAAAGTTTCTGGTA										
Mus musculus	Riken	ILMN_207343	ILMN_207343	9430090I01RIK	ri|9430090I01|PX00653C22|AK079154|1389					AK079154	9430090I01Rik		ILMN_1242202	003520296	S	536	GTACAGCTGGTGAAGGAGACTGCTTTCCAGGTTTCATTTTGGCACAGTGA										
Mus musculus	RefSeq	ILMN_198332	ILMN_226349	KLF14	XM_884028.3	XM_884028.3		619665	149255031	XM_884028.3	Klf14	XP_889121.3	ILMN_1228719	004610289	S	1105	GCTCGTCGCCATCCAACTTACCATCCCGACATGATCGAGTACCGAGGTCG	6	-	30907828-30907877	6qA3.3	PREDICTED: Mus musculus Kruppel-like factor 14 (Klf14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209771	ILMN_209771	GTF3C6	NM_026113.4	NM_026113.4		67371	146135085	NM_026113.4	Gtf3c6	NP_080389.2	ILMN_1257110	003940068	S	618	CCCTTCTGAGATGGAAAGTTCTGTTTTCATGGGAACTCAAGATGGAAATG				10qB1	Mus musculus general transcription factor IIIC, polypeptide 6, alpha (Gtf3c6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2410016F19Rik; AU019813	2410016F19Rik; AU019813
Mus musculus	MEEBO	ILMN_184143	ILMN_184143	5530400B01RIK	scl071434.1_160						5530400B01Rik		ILMN_2416218	007380474	S	13	TCTATCACTCTCCCACCACTCTTACCTGGTCACTGCCGGCACTGGAATGG										
Mus musculus	MEEBO	ILMN_210633	ILMN_210633	9430029K10RIK	scl00029.1_14	XM_284281.2			38086196	XM_284281.2	9430029K10Rik		ILMN_2607608	002060164	S	754	CCTCACGGGTCTGCTCTTTGGAAAGATCGGCTACTACCTGGTGCTTGCCT										
Mus musculus	RefSeq	ILMN_198041	ILMN_198041	LOC280118	XM_207121.2	XM_207121.2			38080856	XM_207121.2	LOC280118		ILMN_2530276	006770717	S	72	AAAAAAGACAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATG										
Mus musculus	RefSeq	ILMN_212460	ILMN_212460	2810426N06RIK	NM_023363.2	NM_023363.2		67607	130493405	NM_023363.2	2810426N06Rik	NP_075852.1	ILMN_2626713	005310333	S	216	TGACAAAGATAGCACACATGTCAAGAGAAGGGTCTCAAGACACACCTGGC	7	+	48898723-48898772	7qB3	Mus musculus RIKEN cDNA 2810426N06 gene (2810426N06Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI605193; AI256342	AI605193; AI256342
Mus musculus	RefSeq	ILMN_212460	ILMN_212460	2810426N06RIK	NM_023363.2	NM_023363.2		67607	130493405	NM_023363.2	2810426N06Rik	NP_075852.1	ILMN_2656296	002230368	S	3043	TGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATGTATGGAATAACTC	7	+	48906114-48906163	7qB3	Mus musculus RIKEN cDNA 2810426N06 gene (2810426N06Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI605193; AI256342	AI605193; AI256342
Mus musculus	MEEBO	ILMN_208682	ILMN_208682	HIST2H2BE	scl00319190.1_155	NM_178214.1			30061396	NM_178214.1	Hist2h2be		ILMN_1253851	002340315	S	166	AGAAATCGACCGAGCTGCTGATCCGCAAGCTGCCGTTCCAGCGCCTGGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_220770	ILMN_220770	ARSB	scl0011881.1_109	NM_009712.1			33859509	NM_009712.1	Arsb		ILMN_2726639	003390541	S	2938	GCACAGCGGTACCATCTTGTTAGCACTCACAGCAGAGTCCAGGAGAAATG						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the hydrolysis of the 4-sulfate groups of the N-acetyl-D-galactosamine 4-sulfate units of chondroitin sulfate and dermatan sulfate [goid 3943] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [evidence IDA]		
Mus musculus	RefSeq	ILMN_235654	ILMN_235654	MAP2K4	NM_009157.2	NM_009157.2		26398	31543232	NM_009157.2	Map2k4	NP_033183.1	ILMN_2920549	003890241	S	3135	GTAATTCTGACTGTCCAGGAGCTATCTCACTTTCTGCTGTGTGGGCGGCC	11	-	65504948-65504997	11qB3	Mus musculus mitogen activated protein kinase kinase 4 (Map2k4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MEK4; Serk1; MKK4; Sek1; JNKK1; PRKMK4	MEK4; Serk1; MKK4; Sek1; JNKK1; PRKMK4
Mus musculus	RefSeq	ILMN_197980	ILMN_197980	LOC207787	XM_156162.2	XM_156162.2			38079939	XM_156162.2	LOC207787		ILMN_1237807	002350041	S	897	TCCTACAAGCTCTGAAGAGACGAGGGTCGGCAAAGAATTGCTCAGCGCTC										
Mus musculus	RefSeq	ILMN_198743	ILMN_231300	LOC270621	XR_002741.1	XR_002741.1		270621	94409031	XR_002741.1	LOC270621		ILMN_1235805	006100307	S	807	CTCTATGTCATCAATTCTTGTGGGGTCCCCGGGCACAATGTGAAATCAGC					PREDICTED: Mus musculus gene model 649, (NCBI) (LOC270621), mRNA.					
Mus musculus	MEEBO	ILMN_194875	ILMN_194875	USMG5	scl0066477.1_316	NM_023211.1			13128953	NM_023211.1	Usmg5		ILMN_1223794	005130017	S	14	CCTCATTTATGATAACTCCGGTAACTTCCCTAAACTCCAGATCTCTAGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]				
Mus musculus	Riken	ILMN_205686	ILMN_205686	E130318P05RIK	ri|E130318P05|PX00208F22|AK053894|2357					AK053894	E130318P05Rik		ILMN_1237655	007100088	S	1479	CCGCGGCCTTCGCGCCCCAGGCTTCTAGGGGCTACATGACATCAGGTGAT										
Mus musculus	RefSeq	ILMN_200677	ILMN_200677	LOC384471	XM_357663.1	XM_357663.1			38085074	XM_357663.1	LOC384471		ILMN_2539611	001500377	S	235	AAGGCTCCAGAGGAAGTGGCGAGGGAGAGCAATGATGACAACAGTGACTG										
Mus musculus	MEEBO	ILMN_224281	ILMN_224281	4930556L07RIK	scl18508.3_584				21312915	NM_029235	4930556L07Rik		ILMN_1212847	000730348	S	1543	GGAGCCATAATTCCAGCACACACTTGTTACAAAGGCTGCCACTGGGAAAT										
Mus musculus	RefSeq	ILMN_189011	ILMN_189011	TRP53INP2	NM_178111.3	NM_178111.3		68728	118130530	NM_178111.3	Trp53inp2	NP_835212.1	ILMN_2457585	000360674	S	3535	CCCCAGCCTGGAACCCTCTGATCAACTTGCTGGGACCTATAACGTCTTAG	2	+	155215184-155215233	2qH1	Mus musculus transformation related protein 53 inducible nuclear protein 2 (Trp53inp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Tp53inp2; 1110029F20Rik	Tp53inp2; 1110029F20Rik
Mus musculus	RefSeq	ILMN_191045	ILMN_237906	VDAC1	NM_011694.3	NM_011694.3		22333	146134384	NM_011694.3	Vdac1	NP_035824.1	ILMN_2475585	006840731	S	1593	CCCTGACAACACTAGGGATCTCAACTGACTCCTCTTGTAGCCTCACCACT				11qB1.3	Mus musculus voltage-dependent anion channel 1 (Vdac1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Catalysis of the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion [goid 8308] [evidence IEA]	AL033343; Vdac5	AL033343; Vdac5
Mus musculus	RefSeq	ILMN_221488	ILMN_221488	MTHFSD	NM_172761.1	NM_172761.1		234814	27370129	NM_172761.1	Mthfsd	NP_766349.1	ILMN_2848466	003120400	S	1529	GAGGTAGACAATGGAGACCTGTTTCAGGGTGTTCAAGGAGAGCGGAGGCC	8	-	123984338-123984387	8qE1	Mus musculus methenyltetrahydrofolate synthetase domain containing (Mthfsd), mRNA.		The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate [goid 30272] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC62465; BC052066; AW049977; C920004D05	MGC62465; BC052066; AW049977; C920004D05
Mus musculus	RefSeq	ILMN_221488	ILMN_221488	MTHFSD	NM_172761.1	NM_172761.1		234814	27370129	NM_172761.1	Mthfsd	NP_766349.1	ILMN_2848463	001030754	S	1707	TGGAGCTCTGTTCCTGGAGACGCTGCATTGTGAGCATGCGTGATGGCTGC	8	-	123984160-123984209	8qE1	Mus musculus methenyltetrahydrofolate synthetase domain containing (Mthfsd), mRNA.		The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate [goid 30272] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC62465; BC052066; AW049977; C920004D05	MGC62465; BC052066; AW049977; C920004D05
Mus musculus	RefSeq	ILMN_220885	ILMN_312765	5430433G21RIK	XM_001480745.1	XM_001480745.1		319909	149249676	XM_001480745.1	5430433G21Rik	XP_001480795.1	ILMN_2728134	000650392	S	2514	GCATCGTGCCGTTATGAGATGATCCGTTCTGTGGGGTAGAACTTGAGGAC				2qF3	PREDICTED: Mus musculus RIKEN cDNA 5430433G21 gene (5430433G21Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222062	ILMN_222062	RDH19	NM_147222.2	NM_147222.2		216453	117320519	NM_147222.2	Rdh19	NP_671755.2	ILMN_1240738	003460201	S	1660	ACTTGGCTTTGGAGGTTAGTGAGGTTTGGAAGACAGAGGTATTGGGAATG	10	+	127298003-127298052	10qD3	Mus musculus retinol dehydrogenase 19 (Rdh19), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IDA]	RDH-S2; RDH-S	RDH-S2; RDH-S
Mus musculus	RefSeq	ILMN_196436	ILMN_196436	4631434O19RIK	XM_130859.4	XM_130859.4			38076267	XM_130859.4	4631434O19Rik		ILMN_1251169	003440327	S	617	GATTATGTAGGCAGACTCCTAAAGCCAGGGGAGGAGCCATCAGAGTACAC										
Mus musculus	RefSeq	ILMN_196436	ILMN_196436	4631434O19RIK	XM_130859.4	XM_130859.4			38076267	XM_130859.4	4631434O19Rik		ILMN_2524167	003170743	S	489	CCAGGGGGCTGGCGACATTCTGCCTGGATAAGGATGCACTTAGAGATGAA										
Mus musculus	RefSeq	ILMN_193728	ILMN_226753	TNS1	XM_984786.1	XM_984786.1		21961	94363689	XM_984786.1	Tns1	XP_989880.1	ILMN_1223049	005050494	S	508	CTGTAAGGCCATGGACACCTGGCTCAATGCAGACCCCCACAATGTCGTTG				1qC3	PREDICTED: Mus musculus tensin 1 (Tns1), mRNA.	A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]		
Mus musculus	RefSeq	ILMN_189707	ILMN_226753	TNS1	XM_984786.1	XM_984786.1		21961	94363689	XM_984786.1	Tns1	XP_989880.1	ILMN_1229315	001660220	S	6718	TTAGGCCAAAGGTCCTATGGTCCATTTGCAGGGTTGGAAAGGCCCTTGCC				1qC3	PREDICTED: Mus musculus tensin 1 (Tns1), mRNA.	A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]		
Mus musculus	RefSeq	ILMN_210754	ILMN_210754	CKM	NM_007710.2	NM_007710.2		12715	118131179	NM_007710.2	Ckm	NP_031736.1	ILMN_2608804	002510053	S	1189	ATCGACGACATGATCCCCGCGCAGAAGTAGGCGCAGGGCGTGGCGCACCA	7	+	20006706-20006735:20006736-20006755	7qA3	Mus musculus creatine kinase, muscle (Ckm), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving phosphocreatine, a phosphagen of creatine present in high concentration in striated muscle which is synthesized and broken down by creatine phosphokinase to buffer ATP concentration. It acts as an immediate energy reserve for muscle [goid 6603] [evidence TAS]; The chemical reactions and pathways resulting in the formation of phosphocreatine, a phosphagen of creatine which is synthesized and broken down by creatine phosphokinase [goid 46314] [evidence IDA]	Catalysis of the reaction: ATP + creatine = ADP + phosphocreatine [goid 4111] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MCK; M-CK; Ckmm	MCK; M-CK; Ckmm
Mus musculus	RefSeq	ILMN_199361	ILMN_199361	KLK1B4	NM_010915.2	NM_010915.2		18048	141803584	NM_010915.2	Klk1b4	NP_035045.1	ILMN_2697256	001090333	S	708	GCCCACTGAGCCAAGTGTCTACACCAAACTTATTAAGTTCAGCTCCTGGA	7	+	51466997-51467046	7qB4	Mus musculus kallikrein 1-related pepidase b4 (Klk1b4), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA];  [goid 5057] [evidence IDA]	Ngfa; mGk-4	Ngfa; mGk-4
Mus musculus	RefSeq	ILMN_199361	ILMN_199361	KLK1B4	NM_010915.2	NM_010915.2		18048	141803584	NM_010915.2	Klk1b4	NP_035045.1	ILMN_1253983	003120189	S	678	CACATCATGGGGCCCTGAACCATGTGGTGAGCCCACTGAGCCAAGTGTCT	7	+	51466967-51467016	7qB4	Mus musculus kallikrein 1-related pepidase b4 (Klk1b4), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA];  [goid 5057] [evidence IDA]	Ngfa; mGk-4	Ngfa; mGk-4
Mus musculus	MEEBO	ILMN_184651	ILMN_184651	6430702L21RIK	scl076217.1_78				51770867	XM_129010	6430702L21Rik		ILMN_1252293	005820450	S	2235	ACCTAATCCTTCTCGGCAGCCAGTACCAGGCCCCTCTGGTTTCTGTGACC										
Mus musculus	MEEBO	ILMN_184651	ILMN_184651	6430702L21RIK	scl076217.1_78				51770867	XM_129010	6430702L21Rik		ILMN_1230527	004560315	S	1	CTGGAGTCATCTAAAGTCCGGAAGAAGCTCTTAAATGTAAAAAACTTTGA										
Mus musculus	RefSeq	ILMN_185047	ILMN_258584	GRAMD1B	NM_172768.1	NM_172768.1		235283	27777682	NM_172768.1	Gramd1b	NP_766356.1	ILMN_2646411	006450600	S	2675	ATCAGGTCCCGAGACTACACAGCTGAGAGCGACGAGAAGAGGAACCGCTA	9	-	40105581-40105630	9qA5.1	Mus musculus GRAM domain containing 1B (Gramd1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA1201; 3222402H23; AI593249; KIAA1201; A930008A22Rik	mKIAA1201; 3222402H23; AI593249; KIAA1201; A930008A22Rik
Mus musculus	RefSeq	ILMN_223809	ILMN_225179	CBLN1	NM_019626.3	NM_019626.3		12404	133506687	NM_019626.3	Cbln1	NP_062600.2	ILMN_1252953	004060072	S	2214	CTCGCGATTGCGCTCATTCGCAGGACTTTCAAGGGGTTCGTCCAGAAGTT	8	-	89992823-89992872	8qC3	Mus musculus cerebellin 1 precursor protein (Cbln1), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI323299	AI323299
Mus musculus	RefSeq	ILMN_212797	ILMN_212797	1700013B16RIK	NM_028157.1	NM_028157.1		72219	30794391	NM_028157.1	1700013B16Rik	NP_082433.1	ILMN_2630401	007560577	S	4107	CTAGGAGTTTCCGGCTGCCCTTCTTTGTGTGGAAGGCACTGTTGGGAGGT	13	-	59709810-59709859	13qB2	Mus musculus RIKEN cDNA 1700013B16 gene (1700013B16Rik), mRNA.					
Mus musculus	MEEBO	ILMN_185484	ILMN_185484	SCL0004162.1_2	scl0004162.1_2	AK032498.1			26328314	AK032498.1	scl0004162.1_2		ILMN_1247755	003140482	S	7	CCTTTAGTCACTGCTATACCGAACTACCTACTTCAAGTCATTTAAAGACC										
Mus musculus	RefSeq	ILMN_201114	ILMN_318436	4930448N21RIK	XM_001474568.1	XM_001474568.1		384817	149258716	XM_001474568.1	4930448N21Rik	XP_001474618.1	ILMN_1254107	003140746	S	1087	ACAGCCGCGGTGGCCGAGACTTTTTTCCTAGGCTGGATCGACGAGCAGGT				8qB1.1	PREDICTED: Mus musculus RIKEN cDNA 4930448N21 gene (4930448N21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201114	ILMN_318436	4930448N21RIK	XM_001474568.1	XM_001474568.1		384817	149258716	XM_001474568.1	4930448N21Rik	XP_001474618.1	ILMN_1259347	000110241	S	2116	CGCATTTGGTTAATACGTTTGTAATGACATTGAAAGAGAAATGGTATGGG				8qB1.1	PREDICTED: Mus musculus RIKEN cDNA 4930448N21 gene (4930448N21Rik), mRNA.					
Mus musculus	Riken	ILMN_203246	ILMN_203246	GHR	ri|E130111P21|PX00091J18|AK053579|1795					AK053579	Ghr		ILMN_1247348	002120520	S	1477	GAGCCCTCACAGCCATCCTTGTTTCTCACTTTCTTCAGTCAGAGCCACAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with any peptide with hormonal activity in animals [goid 17046] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with growth hormone to initiate a change in cell activity [goid 4903] [evidence IDA]		
Mus musculus	RefSeq	ILMN_241102	ILMN_241102	1600027N09RIK	NM_028479.1	NM_028479.1		73247	110625964	NM_028479.1	1600027N09Rik	NP_082755.1	ILMN_2805631	006020687	S	919	AGAACTCCTCAGACTTGGGGTGCAAAGAAGGGGCAGACAAGCGGAAGCGC	2	+	180320066-180320115	2qH4	Mus musculus RIKEN cDNA 1600027N09 gene (1600027N09Rik), mRNA. XM_992877	A multisubunit complex that catalyzes the acetylation of histones H4 and H2A [goid 43189] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]		RP23-74K21.4; MGC118164; AW060503; C80444	RP23-74K21.4; MGC118164; AW060503; C80444
Mus musculus	RefSeq	ILMN_199995	ILMN_199995	LOC384164	XM_357459.1	XM_357459.1			38079611	XM_357459.1	LOC384164		ILMN_1224231	005390152	S	211	TCTGATGAAGTCACAAAGATGTCGTCGGAGGAGGACCGGAGCGCGGAGCA										
Mus musculus	RefSeq	ILMN_214853	ILMN_214853	CTSL	NM_009984.2	NM_009984.2		13039	31560603	NM_009984.2	Ctsl	NP_034114.1	ILMN_2904703	006350132	S	1473	GTGGCAGGTGCTCTGGAGCCTTCGGATTTCACCTCAGTGTCCCATCAGAT	13	-	64378393-64378442	13qB3	Mus musculus cathepsin L (Ctsl), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence TAS]	1190035F06Rik; MEP; fs; nkt	1190035F06Rik; MEP; fs; nkt
Mus musculus	RefSeq	ILMN_191464	ILMN_260128	PHF20	NM_172674.2	NM_172674.2		228829	124487306	NM_172674.2	Phf20	NP_766262.2	ILMN_1214647	004590243	S	1519	GTGCCAGCTGTGGACCTAGACCACAAGTTTCGATGCAAGGTTCTGGACTG	2	+	156113581-156113630	2qH1	Mus musculus PHD finger protein 20 (Phf20), mRNA. XM_902658 XM_921032 XM_921093 XM_977098 XM_980964 XM_981001 XM_981043 XM_981080 XM_981121 XM_981157	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6820402O20Rik	6820402O20Rik
Mus musculus	RefSeq	ILMN_191464	ILMN_260128	PHF20	NM_172674.2	NM_172674.2		228829	124487306	NM_172674.2	Phf20	NP_766262.2	ILMN_1233234	004850142	S	1509	GACGTTGAATGTGCCAGCTGTGGACCTAGACCACAAGTTTCGATGCAAGG	2	+	156113571-156113620	2qH1	Mus musculus PHD finger protein 20 (Phf20), mRNA. XM_902658 XM_921032 XM_921093 XM_977098 XM_980964 XM_981001 XM_981043 XM_981080 XM_981121 XM_981157	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6820402O20Rik	6820402O20Rik
Mus musculus	RefSeq	ILMN_191464	ILMN_260128	PHF20	NM_172674.2	NM_172674.2		228829	124487306	NM_172674.2	Phf20	NP_766262.2	ILMN_2664077	005960673	S	5616	CTGTGTTTACACGCTATTAGACAGAAGGCACTGTACATATGAGTGTTGCT	2	+	156135572-156135621	2qH1	Mus musculus PHD finger protein 20 (Phf20), mRNA. XM_902658 XM_921032 XM_921093 XM_977098 XM_980964 XM_981001 XM_981043 XM_981080 XM_981121 XM_981157	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6820402O20Rik	6820402O20Rik
Mus musculus	RefSeq	ILMN_198310	ILMN_198310	LOC381160	XM_358518.1	XM_358518.1			38083784	XM_358518.1	LOC381160		ILMN_1223521	002750494	S	3	GGACCTTTCTCAATACATGGGGGTCTTGATACAACTTCAGAACGGTTTCC										
Mus musculus	MEEBO	ILMN_211033	ILMN_211033	D030072B18RIK	scl0328079.1_71	XM_283056.2			38049432	XM_283056.2	D030072B18Rik		ILMN_2611773	002750228	S	2582	CTAACACAGAACTTAACCTTTGCACGGGTAGTATTTCCAACAAAGGTTCA										
Mus musculus	MEEBO	ILMN_211033	ILMN_211033	D030072B18RIK	scl0328079.1_71	XM_283056.2			38049432	XM_283056.2	D030072B18Rik		ILMN_1242553	007160482	S	9067	CACGGTATCATGCTCCAAAGGGTGGCTGATGTTGTTAGTGTCACCACGCC										
Mus musculus	RefSeq	ILMN_196957	ILMN_237242	LOC209183	XR_003581.1	XR_003581.1		209183	94394137	XR_003581.1	LOC209183		ILMN_1226802	000620440	S	751	GCCAGATGGCCTAAACCTCAGGAGTTTCCCAAGATGGCAACAAGCCGCTG				12qC3	PREDICTED: Mus musculus similar to dehydrogenase/reductase (SDR family) member 7 (predicted) (LOC209183), mRNA.					
Mus musculus	RefSeq	ILMN_219265	ILMN_219265	ZFP646	NM_172749.3	NM_172749.3		233905	51491886	NM_172749.3	Zfp646	NP_766337.2	ILMN_2706460	006450709	S	6182	GCCTTTTACTATAGTTTGTAACTTATTTTCTAAAATCTATTTTGTAACAA	7	+	135029382-135029431	7qF3	Mus musculus zinc finger protein 646 (Zfp646), mRNA.				6820429M01	6820429M01
Mus musculus	RefSeq	ILMN_219265	ILMN_219265	ZFP646	NM_172749.3	NM_172749.3		233905	51491886	NM_172749.3	Zfp646	NP_766337.2	ILMN_2991339	004540048	S	5669	TCTCATTGTCCTCGCCGCTTCCGCCACCGAATCAGCTTTCTGCGACACCA	7	+	135027345-135027394	7qF3	Mus musculus zinc finger protein 646 (Zfp646), mRNA.				6820429M01	6820429M01
Mus musculus	RefSeq	ILMN_249712	ILMN_249712	NLRP4E	NM_001004194.1	NM_001004194.1		446099	51921378	NM_001004194.1	Nlrp4e	NP_001004194.1	ILMN_2968409	006480605	S	1912	CTGTTGGCATCATGTGTGCTCTGTGCTCACAAGCAGTAAGGATATCCACG	7	+	24121259-24121308	7qA3	Mus musculus NLR family, pyrin domain containing 4E (Nlrp4e), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Nalp4e; Nlrp4; Nalp-epsilon; 4930406H16Rik	Nalp4e; Nlrp4; Nalp-epsilon; 4930406H16Rik
Mus musculus	RefSeq	ILMN_219253	ILMN_219253	LCE1G	NM_025413.2	NM_025413.2		66195	124107617	NM_025413.2	Lce1g	NP_079689.2	ILMN_1244317	003310468	S	627	GTTCTGAATTGTCCTCATGAAATGACAATGACCATTTGCCTCTTTGTTAT	3	-	92554318-92554367	3qF1	Mus musculus late cornified envelope 1G (Lce1g), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI604448; 1110058A15Rik	AI604448; 1110058A15Rik
Mus musculus	RefSeq	ILMN_201446	ILMN_201446	LOC382165	XM_356265.1	XM_356265.1			38093918	XM_356265.1	LOC382165		ILMN_1226878	003390242	S	403	CTGGAAATCAGTTGTGGCTACTGTCCATGAGCTCAGAAGCTCTTCCTTGG										
Mus musculus	MEEBO	ILMN_222065	ILMN_222065	2900042B11RIK	scl25161.8.1_87	XM_204090.2			38078630	XM_204090.2	2900042B11Rik		ILMN_2744100	001450301	S	478	GACTAACAGTCTCAAGTCTTCCTTAGTAATTACAACAAAATGCTCTGAAC										
Mus musculus	RefSeq	ILMN_200984	ILMN_224667	EG381936	NM_001037248.2	NM_001037248.2		381936	142383440	NM_001037248.2	EG381936	NP_001032325.1	ILMN_1233419	007570746	S	638	GGAGAGCGAGACTCGAAGGCTGTTTGCCCAGATAGTACATGCGGTGCAGT	7	-	21310754-21310803	7qA3	Mus musculus predicted gene, EG381936 (EG381936), mRNA.					
Mus musculus	MEEBO	ILMN_188097	ILMN_188097	BC034507	scl11232.1.1_97				51710790	XM_131888	BC034507		ILMN_2754795	005260750	S	2049	TGCATAACGTGTACAGAAGACCCAGGCTAGCAAGCACACAGTCTAGCAAG										
Mus musculus	Riken	ILMN_202209	ILMN_202209	2200005K02RIK	ri|2200005K02|ZX00079C18|AK008639|559					AK008639	2200005K02Rik		ILMN_2547840	004070048	S	374	GAGGCGCTCCAGAAGTAGAGAGCGAGACAGAAGCCGAGAGCGGAGAAGAT										
Mus musculus	RefSeq	ILMN_219634	ILMN_219634	PIP5K1B	NM_008846.2	NM_008846.2		18719	110835699	NM_008846.2	Pip5k1b	NP_032872.1	ILMN_2711562	001090239	S	2046	TGGCCAATCACCCTTTTGGACTGGGAAGCGCTATTTTCCTATAGGCTCTC	19	-	24369716-24369765	19qB	Mus musculus phosphatidylinositol-4-phosphate 5-kinase, type 1 beta (Pip5k1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [evidence IDA]	Pipk5a; AI844522; Pip5k1a; STM7; Pipk5b	Pipk5a; AI844522; Pip5k1a; STM7; Pipk5b
Mus musculus	RefSeq	ILMN_213958	ILMN_213958	SLC1A4	NM_018861.2	NM_018861.2		55963	31980934	NM_018861.2	Slc1a4	NP_061349.2	ILMN_2888552	003830709	S	3537	ATTATGTAGGAACTGGAGCTGGACAGTGAAACCCCCTGGCTGGCACTCAG	11	-	20202480-20202529	11qA3.1	Mus musculus solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 (Slc1a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]	SATT; ASCT1; AW045657	SATT; ASCT1; AW045657
Mus musculus	RefSeq	ILMN_216057	ILMN_216057	RPL14	NM_025974.2	NM_025974.2		67115	142373739	NM_025974.2	Rpl14	NP_080250.1	ILMN_1227142	001400482	S	871	GTACAACAGTGTCGTTAACCCTAACAAATAAATTTCCCACCAACGGGTGG	9	+	120483706-120483755	9qF4	Mus musculus ribosomal protein L14 (Rpl14), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CAG-ISL-7; AL022816; L14; AA407502; CTG-B33; 3100001N19Rik	CAG-ISL-7; AL022816; L14; AA407502; CTG-B33; 3100001N19Rik
Mus musculus	RefSeq	ILMN_257572	ILMN_257572	CAMSAP1L1	NM_001081360.1	NM_001081360.1		67886	124486888	NM_001081360.1	Camsap1l1	NP_001074829.1	ILMN_3131302	004640634	A	3916	GACACCAAATGAGGACCAACTGAGCCAGCCCACAGAGCCACCTCCTAAAC	1	-	138177049-138177098	1qE4	Mus musculus calmodulin regulated spectrin-associated protein 1-like 1 (Camsap1l1), mRNA.				4930541M15Rik; mKIAA1078; 1600013L13Rik	4930541M15Rik; mKIAA1078; 1600013L13Rik
Mus musculus	RefSeq	ILMN_221737	ILMN_221737	TGIF2LX	NM_153109.1	NM_153109.1		245583	23346540	NM_153109.1	Tgif2lx	NP_694749.1	ILMN_2739692	006480484	S	817	CTCTGGGAGGTTCATTTATACTTAACCTGATTAGCTTGTAATGCCGTCTT	X	-	115593472-115593521	XqE1	Mus musculus TGFB-induced factor homeobox 2-like, X-linked (Tgif2lx), mRNA.				Tex1; MGC130458	Tex1; MGC130458
Mus musculus	RefSeq	ILMN_228043	ILMN_228043	OTTMUSG00000010673	NM_001014397.1	NM_001014397.1		433804	85701491	NM_001014397.1	OTTMUSG00000010673	NP_001014419.1	ILMN_2898886	004640639	S	2208	TATTCATGGTGTCCTGGCAACACTTGAGGCTCCACACTAGAGAATTAGTG	4	+	146428401-146428450	4qE1	Mus musculus predicted gene, OTTMUSG00000010673 (OTTMUSG00000010673), mRNA. XM_902030 XM_902032 XM_902035 XM_918501	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_205745	ILMN_260142	ADAL	NM_029475.1	NM_029475.1		75894	110626055	NM_029475.1	Adal	NP_083751.1	ILMN_1260070	003370470	S	1294	CTCCAGCCCCTTCAACTGGTAAGTTCGAGGTTTTGCATGGCTGCACTTCC	2	+	120981391-120981440	2qE5	Mus musculus adenosine deaminase-like (Adal), mRNA. XM_900859 XM_900862 XM_917792 XM_925262 XM_925265 XM_925269 XM_925272 XM_925275 XM_986097 XM_986134 XM_986169 XM_986201 XM_986236 XM_986298		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]	MGC62428; 4930578F03Rik; MGC63264	MGC62428; 4930578F03Rik; MGC63264
Mus musculus	RefSeq	ILMN_260142	ILMN_260142	ADAL	NM_029475.1	NM_029475.1		75894	110626055	NM_029475.1	Adal	NP_083751.1	ILMN_2948663	007100471	S	2115	GGTTCTGGGTGGAAAGCAAAGGAAATGGAACAAGGCACGAGGAGCAAGCC	2	+	120982212-120982261	2qE5	Mus musculus adenosine deaminase-like (Adal), mRNA. XM_900859 XM_900862 XM_917792 XM_925262 XM_925265 XM_925269 XM_925272 XM_925275 XM_986097 XM_986134 XM_986169 XM_986201 XM_986236 XM_986298		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]	MGC62428; 4930578F03Rik; MGC63264	MGC62428; 4930578F03Rik; MGC63264
Mus musculus	RefSeq	ILMN_220507	ILMN_260142	ADAL	NM_029475.1	NM_029475.1		75894	110626055	NM_029475.1	Adal	NP_083751.1	ILMN_1242772	002470500	S	1864	CTTAGATCACCAATAATCCCATGCCCACATGATAGCCTACAGGTATAGAC	2	+	120981961-120982010	2qE5	Mus musculus adenosine deaminase-like (Adal), mRNA. XM_900859 XM_900862 XM_917792 XM_925262 XM_925265 XM_925269 XM_925272 XM_925275 XM_986097 XM_986134 XM_986169 XM_986201 XM_986236 XM_986298		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]	MGC62428; 4930578F03Rik; MGC63264	MGC62428; 4930578F03Rik; MGC63264
Mus musculus	RefSeq	ILMN_202455	ILMN_260142	ADAL	NM_029475.1	NM_029475.1		75894	110626055	NM_029475.1	Adal	NP_083751.1	ILMN_1248376	002630706	S	839	GTGGACTTCGTGAGGCAACACCAGATACCCCTCGAACTTTGTTTGACCTC	2	+	120978271-120978304:120980455-120980470	2qE5	Mus musculus adenosine deaminase-like (Adal), mRNA. XM_900859 XM_900862 XM_917792 XM_925262 XM_925265 XM_925269 XM_925272 XM_925275 XM_986097 XM_986134 XM_986169 XM_986201 XM_986236 XM_986298		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]	MGC62428; 4930578F03Rik; MGC63264	MGC62428; 4930578F03Rik; MGC63264
Mus musculus	RefSeq	ILMN_233548	ILMN_233548	NUDT7	NM_024437.1	NM_024437.1		67528	18859594	NM_024437.1	Nudt7	NP_077757.1	ILMN_3123836	005420685	A	864	CCTACAATGTGGCTGTGAGATCCTTGCCTGACTTCCTGTTGCTGCTTTAG	8	+	117038095-117038144	8qE1	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 7 (Nudt7), transcript variant 1, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways involving a nucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with diphosphate on its glycose moiety [goid 9132] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15938] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated [goid 46356] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + H2O = CoA + acetate [goid 3986] [evidence IDA]	2210404C19Rik; 1300007B24Rik	2210404C19Rik; 1300007B24Rik
Mus musculus	RefSeq	ILMN_199270	ILMN_199270	LOC209901	XM_142849.2	XM_142849.2			38093621	XM_142849.2	LOC209901		ILMN_1246214	002450044	S	1755	CCATGCAGCAGTCCCACTGCCTGGAACTGAGCAGAGAGATAAAGACTTCG										
Mus musculus	RefSeq	ILMN_192705	ILMN_192705	TSPAN4	NM_053082.2	NM_053082.2		64540	54020728	NM_053082.2	Tspan4	NP_444312.1	ILMN_2490548	005310487	S	1193	GCACCCAGGGCTAAGGGCCCAGGGAACTTTGACACTTTTTATATCCATAT	7	+	148679053-148679102	7qF5	Mus musculus tetraspanin 4 (Tspan4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI325509; AI746565; NAG-2; MGC102386; D130042I01Rik; Tm4sf7; Tspan-4	AI325509; AI746565; NAG-2; MGC102386; D130042I01Rik; Tm4sf7; Tspan-4
Mus musculus	RefSeq	ILMN_211388	ILMN_192705	TSPAN4	NM_053082.2	NM_053082.2		64540	54020728	NM_053082.2	Tspan4	NP_444312.1	ILMN_2615322	006290162	S	1235	TATAAAAAGTGTCAAAGTTCCCTGGGCCCTTAGCCCTGGGTGCCATTTGG	7	+	148679095-148679144	7qF5	Mus musculus tetraspanin 4 (Tspan4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI325509; AI746565; NAG-2; MGC102386; D130042I01Rik; Tm4sf7; Tspan-4	AI325509; AI746565; NAG-2; MGC102386; D130042I01Rik; Tm4sf7; Tspan-4
Mus musculus	RefSeq	ILMN_192705	ILMN_192705	TSPAN4	NM_053082.2	NM_053082.2		64540	54020728	NM_053082.2	Tspan4	NP_444312.1	ILMN_2962584	001240315	S	1066	AGGACTGGTGTTCTGCTGAATGCAGGGGGAAGAGCTGGAGGCCAGAGCAC	7	+	148678926-148678975	7qF5	Mus musculus tetraspanin 4 (Tspan4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI325509; AI746565; NAG-2; MGC102386; D130042I01Rik; Tm4sf7; Tspan-4	AI325509; AI746565; NAG-2; MGC102386; D130042I01Rik; Tm4sf7; Tspan-4
Mus musculus	RefSeq	ILMN_197115	ILMN_259650	TUBAL3	NM_001033879.2	NM_001033879.2		238463	142385159	NM_001033879.2	Tubal3	NP_001029051.1	ILMN_1244458	003180382	S	1273	CCTGCACTGGTACATCACAGAAGGCATGGAGCTTGGGGAGTTTGTAGAGG	13	+	3932700-3932749	13qA1	Mus musculus tubulin, alpha-like 3 (Tubal3), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197569	ILMN_317001	LMO7	NM_201529.1	NM_201529.1		380928	146149261	NM_201529.1	Lmo7	NP_963287.1	ILMN_1248999	006860088	S	4922	GTCTACATCAAACCGTGCCTACATGCGGAACCCATCCTCTGCGGTGCCAC				14qE2.3	Mus musculus LIM domain only 7 (Lmo7), mRNA.	The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISO]; An adherens junction which connects two cells to each other [goid 5913] [evidence ISO]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with actinin, any member of a family of proteins that crosslink F-actin [goid 42805] [evidence ISO]	Gm914; C78582; mKIAA0858; FBXO20	Gm914; C78582; mKIAA0858; FBXO20
Mus musculus	RefSeq	ILMN_193223	ILMN_193223	ZFYVE16	NM_173392.3	NM_173392.3		218441	146198852	NM_173392.3	Zfyve16	NP_775568.1	ILMN_1244584	004810307	S	5035	CCTCATAGATGACGAGAATGAAGGAGAGACCTGCGTTGTGTGGATGCTAG				13qC3	Mus musculus zinc finger, FYVE domain containing 16 (Zfyve16), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	B130031L15; B130024H06Rik; mKIAA0305; AI035632	B130031L15; B130024H06Rik; mKIAA0305; AI035632
Mus musculus	RefSeq	ILMN_214018	ILMN_214018	2210020M01RIK	NM_183259.2	NM_183259.2		66528	142361183	NM_183259.2	2210020M01Rik	NP_899082.1	ILMN_2643326	002490070	S	829	GAACATGGCAGCATTCTGGTTAAAATTTGTCTGCTTATTTCCAAGTAAAC	11	+	115767511-115767560	11qE2	Mus musculus RIKEN cDNA 2210020M01 gene (2210020M01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199733	ILMN_199733	LOC382933	XM_356755.1	XM_356755.1			38076661	XM_356755.1	LOC382933		ILMN_1246736	006280398	S	190	GATGAAGTCATGGAGGCTCAGAGACTGGAAGTGGCTTGCTGGACATTGTC										
Mus musculus	RefSeq	ILMN_213192	ILMN_213192	0610007P22RIK	NM_026676.1	NM_026676.1		68327	21489946	NM_026676.1	0610007P22Rik	NP_080952.1	ILMN_2634564	001070170	S	1050	CTGGTGTGCATTATTCAGAAGTGGCAGTAGGACCTGGGGATGGACGGGCC	17	+	24970285-24970334	17qA3.3	Mus musculus RIKEN cDNA 0610007P22 gene (0610007P22Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AL022759; MGC113771; 1110014B11Rik	AL022759; MGC113771; 1110014B11Rik
Mus musculus	Riken	ILMN_205302	ILMN_205302	4832436F04RIK	ri|4832436F04|PX00313O06|AK029333|2981					AK029333	4832436F04Rik		ILMN_2571535	004890521	S	2664	AGAGGTGGGCCTGGTAACACCCATACCAATCCAACGTGTGGGAAGTGGGG										
Mus musculus	RefSeq	ILMN_185019	ILMN_252918	SNX30	NM_172468.2	NM_172468.2		209131	84781798	NM_172468.2	Snx30	NP_766056.1	ILMN_2705578	005270671	S	2345	GAGTGAGCACGCCAGCGTCCTTGTCCTTATGGGATGCCTCAGGATCTTGT	4	+	59912450-59912499	4qB3	Mus musculus sorting nexin family member 30 (Snx30), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4732481H14Rik; MGC106086; C030041J06Rik	4732481H14Rik; MGC106086; C030041J06Rik
Mus musculus	RefSeq	ILMN_221086	ILMN_221086	AU021034	NM_177629.2	NM_177629.2		219170	31341317	NM_177629.2	AU021034	NP_808297.1	ILMN_2914305	002630367	S	2003	GGCAGCCCTACCAGTCTACGCTAACCTTCCCCAGTCTCCACACAAGCCTT	14	-	76815364-76815413	14qD3	Mus musculus expressed sequence AU021034 (AU021034), mRNA.				9330158N17	9330158N17
Mus musculus	MEEBO	ILMN_192036	ILMN_192036	PFKFB2	scl16323.27.1_101				34147044	NM_008825	Pfkfb2		ILMN_2687339	005290307	S	1169	TCATGGAGCTAGAGCGTCAAGGCAACATCCTCGTTATCTCTCACCAGGCT							The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 6000] [evidence IEA]; The chemical reactions and pathways involving fructose 2,6-bisphosphate. The D enantiomer is an important regulator of the glycolytic and gluconeogenic pathways. It inhibits fructose 1,6-bisphosphatase and activates phosphofructokinase [goid 6003] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 2,6-bisphosphate [goid 3873] [evidence IEA]; Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 4331] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192036	ILMN_192036	PFKFB2	scl16323.27.1_101				34147044	NM_008825	Pfkfb2		ILMN_2484411	003710722	S	20	TTGAAGGCTGATATTTTACTGAAAGATAGAATGGTCACTGACATTCCACC							The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 6000] [evidence IEA]; The chemical reactions and pathways involving fructose 2,6-bisphosphate. The D enantiomer is an important regulator of the glycolytic and gluconeogenic pathways. It inhibits fructose 1,6-bisphosphatase and activates phosphofructokinase [goid 6003] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 2,6-bisphosphate [goid 3873] [evidence IEA]; Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 4331] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201598	ILMN_232465	SYNE1	NM_153399.2	NM_153399.2		64009	119120858	NM_153399.2	Syne1	NP_700448.2	ILMN_1248614	002850259	S	4650	GCAGGCCAAGTCAATCAAGGAGCAGGTCACAACCCTGGAAGACACGCTTG	10	+	5007260-5007309	10qA1	Mus musculus synaptic nuclear envelope 1 (Syne1), transcript variant 1, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1
Mus musculus	RefSeq	ILMN_202954	ILMN_232465	SYNE1	NM_153399.2	NM_153399.2		64009	119120858	NM_153399.2	Syne1	NP_700448.2	ILMN_1219831	003370735	S	531	CACAAAATGGATCAATTCCCATCTGGCCAAGCGGAAGCCTCCCATGGTGG	10	+	4889704-4889734:4903306-4903324	10qA1	Mus musculus synaptic nuclear envelope 1 (Syne1), transcript variant 1, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1
Mus musculus	RefSeq	ILMN_232465	ILMN_232465	SYNE1	NM_153399.2	NM_153399.2		64009	119120858	NM_153399.2	Syne1	NP_700448.2	ILMN_3049961	002650139	I	6689	GAACTCAGTTCCTTGGAAGCGTCAGCATCTGCCGCGGATGTGCAGATCAG	10	+	5009299-5009348	10qA1	Mus musculus synaptic nuclear envelope 1 (Syne1), transcript variant 1, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1
Mus musculus	RefSeq	ILMN_211140	ILMN_211140	CNTFR	NM_016673.1	NM_016673.1		12804	7710005	NM_016673.1	Cntfr	NP_057882.1	ILMN_1226232	006420025	S	1339	GCAGACCCCGGTTTCTATTTTGCACACGGGCAGGAGGACCTTTTGCATTC	4	-	41605068-41605117	4qA5	Mus musculus ciliary neurotrophic factor receptor (Cntfr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4896] [evidence IEA]	Cntfralpha	Cntfralpha
Mus musculus	RefSeq	ILMN_211140	ILMN_211140	CNTFR	NM_016673.1	NM_016673.1		12804	7710005	NM_016673.1	Cntfr	NP_057882.1	ILMN_1255032	000460286	S	87	CCCAGGAAGACTTTGGTCTGGAGAGGAGGATAATATTGATGTGTGTGGAG	4	-	41633847-41633896	4qA5	Mus musculus ciliary neurotrophic factor receptor (Cntfr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 4896] [evidence IEA]	Cntfralpha	Cntfralpha
Mus musculus	RefSeq	ILMN_199033	ILMN_310793	LOC100040182	XM_001475086.1	XM_001475086.1		100040182	149260928	XM_001475086.1	LOC100040182	XP_001475136.1	ILMN_2533810	004230273	S	186	ATCAGACAAGGCAAATTGAAGTTGGTTATCCTCGCCAACAGCTGCCCAGC	10	+	68788136-68788185	10qB5.3	PREDICTED: Mus musculus similar to ribosomal protein L30 (LOC100040182), mRNA.					
Mus musculus	RefSeq	ILMN_212553	ILMN_212553	CYP8B1	NM_010012.2	NM_010012.2		13124	31981807	NM_010012.2	Cyp8b1	NP_034142.2	ILMN_2627744	004900341	S	1844	CGATGCCCTTACTCCAAATCCTACCAGCTCAGACTCCAGGGATGTTGCTC	9	-	121823516-121823565	9qF4	Mus musculus cytochrome P450, family 8, subfamily b, polypeptide 1 (Cyp8b1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 7alpha-hydroxycholest-4-en-3-one + NADPH + H+ + O2 = 7alpha,12alpha-dihydroxycholest-4-en-3-one + NADP+ + H2O [goid 33778] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221185	ILMN_221185	AI836003	NM_177716.2	NM_177716.2		239650	142386196	NM_177716.2	AI836003	NP_808384.1	ILMN_2732079	005910541	S	2119	CGGTACCCTCTGCTTTCTGGTGTTGCCTCCATAATGTCTTGTGTTATGTG	15	+	98000209-98000258	15qF1	Mus musculus expressed sequence AI836003 (AI836003), mRNA.				5630400A08	5630400A08
Mus musculus	RefSeq	ILMN_194589	ILMN_244232	1500035H01RIK	NM_023831.3	NM_023831.3		76568	141802295	NM_023831.3	1500035H01Rik	NP_076320.2	ILMN_2667894	006270398	S	3115	CCACTGCAGGGACTTTGAGCAAAGTGGTTGCTTCCTCTCACCTCCTCACC	9	+	44600575-44600624	9qA5.2	Mus musculus RIKEN cDNA 1500035H01 gene (1500035H01Rik), mRNA.				IFT46; AA408110; AI663846; c11orf2; R75047	IFT46; AA408110; AI663846; c11orf2; R75047
Mus musculus	MEEBO	ILMN_190435	ILMN_190435	PLCL1	scl0227120.5_21				51705008	XM_129785	Plcl1		ILMN_2470157	004290736	S	20	GTTCCAGGGTGGAGCTTTTAGGACGGGTATGAACCCTGAAGGCATTGATC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with the gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor [goid 50811] [evidence TAS]		
Mus musculus	MEEBO	ILMN_190435	ILMN_190435	PLCL1	scl0227120.5_21				51705008	XM_129785	Plcl1		ILMN_2643486	004230433	S	3498	GGGCAAAGGAAGGCTTGAAGGGAAGAAAACTCAACAAGGCCATTGAGAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with the gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor [goid 50811] [evidence TAS]		
Mus musculus	RefSeq	ILMN_199287	ILMN_199287	LOC333472	XM_285687.2	XM_285687.2			38093905	XM_285687.2	LOC333472		ILMN_1215437	007160497	S	281	CCTCTCAGGACAAGCTGGAACAGAAGATCGAGGACCATAACCCACCCTTC										
Mus musculus	Riken	ILMN_207183	ILMN_207183	6820427D17RIK	ri|6820427D17|PX00650C05|AK078510|3656					AK078510	6820427D17Rik		ILMN_1216792	000580372	S	3437	CAGAGTGTGCATTCCACGGTTGCCTTTCTGGCTGGGTAAGGATCCGGCAG										
Mus musculus	RefSeq	ILMN_200346	ILMN_200346	LOC386270	XM_359149.1	XM_359149.1			38081384	XM_359149.1	LOC386270		ILMN_2538436	002470551	S	879	CCTGGAGGGCATCATCTTGAGTGAGGTAACCCAATCACAAATGAACTCGC										
Mus musculus	RefSeq	ILMN_186759	ILMN_323018	TSGA8	XR_035356.1	XR_035356.1		60600	149271791	XR_035356.1	Tsga8		ILMN_1253044	005130121	S	912	CGAGGAGGAACCGACCAGCGGAGAAGCAGTCGCTACTACAACCATGACCT	X	-	80732125-80732174	XqC1	PREDICTED: Mus musculus testis specific gene A8 (Tsga8), misc RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_210400	ILMN_210400	RAB9B	NM_176971.1	NM_176971.1		319642	28892800	NM_176971.1	Rab9b	NP_795945.1	ILMN_2977871	004900068	S	3604	GTGCCTGCCTTGGCCATCTCTACTTTATTCTGAGGTATTCCACCATCCTC	X	-	132204622-132204671	XqF1	Mus musculus RAB9B, member RAS oncogene family (Rab9b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC130383; 9330195C02Rik	MGC130383; 9330195C02Rik
Mus musculus	Riken	ILMN_206355	ILMN_206355	D430019K11RIK	ri|D430019K11|PX00194B23|AK084960|859					AK084960	D430019K11Rik		ILMN_1252502	005960601	S	505	GTGGTGGAGTTGGGTAAGAAGAGATTGGCACCTCCAAGCCTCTGGGTTCC										
Mus musculus	RefSeq	ILMN_220442	ILMN_220442	OLFR976	NM_146367.1	NM_146367.1		258364	22129568	NM_146367.1	Olfr976	NP_666479.1	ILMN_3161316	006860112	S	609	CACCTCCCTAGCGCAGACTGTGAGTTTTACTAATGTTGGCGTTGTTGCGC	9	-	39763896-39763945	9qA5.1	Mus musculus olfactory receptor 976 (Olfr976), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR224-10	MOR224-10
Mus musculus	RefSeq	ILMN_198171	ILMN_198171	LOC328820	XM_283438.2	XM_283438.2			38082495	XM_283438.2	LOC328820		ILMN_2530729	003890360	S	2921	CTCTCCTCAATGCCTTCCAGTCAACATCCATAGGTTCGTCAACACCCGTG										
Mus musculus	RefSeq	ILMN_219861	ILMN_219861	TLR12	NM_205823.2	NM_205823.2		384059	148539900	NM_205823.2	Tlr12	NP_991392.1	ILMN_2714500	000990121	S	2602	TAGATAGCATGTTGAGCAGCCGTACCACACTCTGCGTGTTGAGTGGGCAG				4qD2.2	Mus musculus toll-like receptor 12 (Tlr12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm1365	Gm1365
Mus musculus	RefSeq	ILMN_220212	ILMN_241847	LOC674114	XM_975388.1	XM_975388.1		674114	94393748	XM_975388.1	LOC674114	XP_980482.1	ILMN_1230239	003830435	S	283	GTGGTAGCACCTATTATCCAGACACTGTAAAGGGCCGATTCACCATCTCC					PREDICTED: Mus musculus similar to Ig heavy chain V region 5-84 precursor (LOC674114), mRNA.					
Mus musculus	RefSeq	ILMN_220212	ILMN_241847	LOC674114	XM_975388.1	XM_975388.1		674114	94393748	XM_975388.1	LOC674114	XP_980482.1	ILMN_2761406	006660746	S	254	GGAGTGGGTCGCATACATTAGTAATGGTGGTGGTAGCACCTATTATCCAG					PREDICTED: Mus musculus similar to Ig heavy chain V region 5-84 precursor (LOC674114), mRNA.					
Mus musculus	RefSeq	ILMN_214336	ILMN_214336	HOXA10	NM_008263.1	NM_008263.1		15395	6680242	NM_008263.1	Hoxa10	NP_032289.1	ILMN_2672443	002600035	S	523	AAGAGAGCTCCTACTGCCTCTACGATGCTGCGGACAAATGCCCCAAGGGC	6	-	52184366-52184415	6qB3	Mus musculus homeo box A10 (Hoxa10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]	Hoxa-10; Hox-1.8	Hoxa-10; Hox-1.8
Mus musculus	RefSeq	ILMN_214336	ILMN_214336	HOXA10	NM_008263.1	NM_008263.1		15395	6680242	NM_008263.1	Hoxa10	NP_032289.1	ILMN_2646967	004540669	S	2413	GTTTAAGCAAATGCATTCTATCGTTATTATAAATGTTAGTTCTAGCTTTA	6	-	52181298-52181347	6qB3	Mus musculus homeo box A10 (Hoxa10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]	Hoxa-10; Hox-1.8	Hoxa-10; Hox-1.8
Mus musculus	RefSeq	ILMN_200887	ILMN_200887	LOC381892	XM_358673.1	XM_358673.1			38086835	XM_358673.1	LOC381892		ILMN_2540350	006200747	S	113	GCGGGGACAAGATGAAGTACCAGAAATACCTGACGGTGCTGCAGATGGCC										
Mus musculus	RefSeq	ILMN_198603	ILMN_310542	LOC628002	XR_031284.1	XR_031284.1		628002	149271897	XR_031284.1	LOC628002		ILMN_1244525	005390554	S	1312	AGATACTGGATGCCACCTATCGGTCCATGAATGGGAAGGGCCCTGCGTAC				XqA7.1	PREDICTED: Mus musculus similar to YTH domain family, member 2 (LOC628002), misc RNA.					
Mus musculus	RefSeq	ILMN_249320	ILMN_249320	UBL7	NM_027086.1	NM_027086.1		69459	21312293	NM_027086.1	Ubl7	NP_081362.1	ILMN_2972063	000010743	S	1151	ATCCAAGCAGCCCTGGAACTCATCTTTGCTGGAGGAGCCCCATGAACTTC	9	+	57727944-57727987:57727988-57727993	9qB	Mus musculus ubiquitin-like 7 (bone marrow stromal cell-derived) (Ubl7), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		2300004C15Rik	2300004C15Rik
Mus musculus	MEEBO	ILMN_219642	ILMN_219642	SCNM1	scl21849.6.80_71				51708272	XM_485277	Scnm1		ILMN_2711714	002140048	S	767	TCTCCCCTTGGACTAACATTAATAACCCCTTTCCCCATTTGTCCTACAAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216575	ILMN_216575	ARTN	NM_009711.2	NM_009711.2		11876	31542147	NM_009711.2	Artn	NP_033841.1	ILMN_2941280	000240608	S	1932	CACTGACCAACAGTCCCAAGTTGTTCATGGATCACAGCTCTACAGACAGG	4	-	117424289-117424338	4qD2.1	Mus musculus artemin (Artn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; A growth factor that binds to glial cell line-derived neurotrophic factor receptors [goid 30116] [evidence ISA]; A growth factor that binds to glial cell line-derived neurotrophic factor receptors [goid 30116] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]	neublastin	neublastin
Mus musculus	RefSeq	ILMN_223520	ILMN_223520	9330155M09RIK	NM_177254.4	NM_177254.4		320756	141802085	NM_177254.4	9330155M09Rik	NP_796228.2	ILMN_2765053	006580750	S	1842	CACTATGATATGAAACGATGGCCTTTAGAGAGCTTTTGACAGTTTCATCA	16	-	67444094-67444143	16qC2	Mus musculus RIKEN cDNA 9330155M09 gene (9330155M09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220383	ILMN_220383	LHFPL2	NM_172589.2	NM_172589.2		218454	141803108	NM_172589.2	Lhfpl2	NP_766177.1	ILMN_2721357	006200397	S	4094	GCAGAAGGGTCTTTAGGTGCTGGGAAGGAACTTGGGCACCACTTGATGTC	13	+	94965110-94965159	13qD1	Mus musculus lipoma HMGIC fusion partner-like 2 (Lhfpl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			6030465B15; mKIAA0206; AI447312; AW050335	6030465B15; mKIAA0206; AI447312; AW050335
Mus musculus	RefSeq	ILMN_198947	ILMN_198947	LOC245000	XM_147046.2	XM_147046.2			38090004	XM_147046.2	LOC245000		ILMN_1216913	004670356	S	1167	GCAGTCATGTCAATGGTTGGCTACATCCTGGGGCTTGGAGACCGTCATGG										
Mus musculus	RefSeq	ILMN_222121	ILMN_222121	CHTF18	NM_145409.1	NM_145409.1		214901	21703815	NM_145409.1	Chtf18	NP_663384.1	ILMN_1232175	001260022	S	2907	TGGTTCCGGTTCAACGAGGGCGTCTCAAATGCTGTTCGGCGCAGCCTGTA	17	-	25856111-25856160	17qA3.3	Mus musculus CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) (Chtf18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Chl12; 6030457M03Rik; MGC38008	Chl12; 6030457M03Rik; MGC38008
Mus musculus	Riken	ILMN_207144	ILMN_207144	F730021A14RIK	ri|F730021A14|PL00003E02|AK089391|2173					AK089391	F730021A14Rik		ILMN_2585368	001690575	S	1983	TCCAGTTCTTCATTGCACGTTAACAGTTGCAGCACTGGGTTCTGGCAGCC										
Mus musculus	RefSeq	ILMN_189676	ILMN_227328	ZCCHC4	NM_030185.2	NM_030185.2		78796	142370225	NM_030185.2	Zcchc4	NP_084461.1	ILMN_2463405	006660243	S	1847	GGAAGCGTCACAGGTTAATGTGGGATTCAAACGCTGCCCCTAGAACTCTG	5	+	53210927-53210976	5qC1	Mus musculus zinc finger, CCHC domain containing 4 (Zcchc4), mRNA. XM_923669 XM_923685 XM_923691 XM_977051 XM_977085 XM_977122 XM_977192		The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4930449I23Rik	4930449I23Rik
Mus musculus	MEEBO	ILMN_216512	ILMN_216512	2700060E02RIK	scl0068045.1_0	NM_026528.1			13386025	NM_026528.1	2700060E02Rik		ILMN_1246483	003850626	S	0	TTCGCGGTCGCCGGTGCCTGCGCTGCCCGCCTCACCTCGCTCTCCTGTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_199971	ILMN_199971	LOC384129	XM_357442.1	XM_357442.1			38079355	XM_357442.1	LOC384129		ILMN_2537134	007560768	S	310	TTCCCCAACCACCAGTACAACTCCTACTACCCCAACCGCAGCGCCTACCC										
Mus musculus	RefSeq	ILMN_197198	ILMN_314724	LOC100039755	XM_001473445.1	XM_001473445.1		100039755	149269624	XM_001473445.1	LOC100039755	XP_001473495.1	ILMN_1258097	001230528	S	655	GATCCCCATACCTCCAAGTCGGTTCTCGGGTGTGAGGGGTGGTCGCGTTT	18	-	9592947-9592996	18qA1	PREDICTED: Mus musculus hypothetical protein LOC100039755 (LOC100039755), mRNA.					
Mus musculus	RefSeq	ILMN_215077	ILMN_215077	SLU7	NM_198936.1	NM_198936.1		193116	39812172	NM_198936.1	Slu7	NP_945174.1	ILMN_2655273	005910753	S	3559	CTCTACCTCGACATGGGTGGTTCAACACAAAGTCGGTTATTGGTGTCTAT	11	+	43261389-43261438	11qA5-qB1.1	Mus musculus SLU7 splicing factor homolog (S. cerevisiae) (Slu7), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AU018913; D3Bwg0878e; RP23-26M1.8; MGC31026; D11Ertd730e	AU018913; D3Bwg0878e; RP23-26M1.8; MGC31026; D11Ertd730e
Mus musculus	RefSeq	ILMN_219136	ILMN_219136	6330409N04RIK	NM_025697.3	NM_025697.3		66674	146135008	NM_025697.3	6330409N04Rik	NP_079973.1	ILMN_2704715	004060576	S	1180	CTGAACTTGAGTCACCATAGTCTGTAATCCAATAATTTTGTGTCTCCCTG				14qD1	Mus musculus RIKEN cDNA 6330409N04 gene (6330409N04Rik), mRNA.					
Mus musculus	Riken	ILMN_204080	ILMN_204080	A730014G01RIK	ri|A730014G01|PX00149M17|AK042669|1597					AK042669	A730014G01Rik		ILMN_2562204	002120433	S	1333	ACGCAGTTTCCACCTTTAATTGTCCTCCGTAAACACCTCTGTGACTGCAC										
Mus musculus	RefSeq	ILMN_199482	ILMN_199482	LOC382596	XM_356587.1	XM_356587.1			38050522	XM_356587.1	LOC382596		ILMN_1235087	006900138	S	291	CGAAGAGGAATCAAAACCAGAAAAGAACTTCCAGCAGCGACATGTTGGGC										
Mus musculus	RefSeq	ILMN_184522	ILMN_184522	USP6NL	NM_181399.3	NM_181399.3		98910	123173768	NM_181399.3	Usp6nl	NP_852064.2	ILMN_1254995	006020440	S	4005	CCCAACTCCTGACAGAATAACCAGGCTCTTGATTTAGATCATGTGGAAGG	2	+	6364208-6364257	2qA1	Mus musculus USP6 N-terminal like (Usp6nl), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	TRE2NL; RNTRE; mKIAA0019; AI316785	TRE2NL; RNTRE; mKIAA0019; AI316785
Mus musculus	RefSeq	ILMN_218288	ILMN_218288	NCL	NM_010880.3	NM_010880.3		17975	84875536	NM_010880.3	Ncl	NP_035010.3	ILMN_2693976	000460497	S	3244	CAGTGGCCTTTTTGACTTAAAGGTTGTCAGAGGTCCAGTTTAACTAGGGA	1	-	88246257-88246306	1qD	Mus musculus nucleolin (Ncl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Nucl; B530004O11Rik; D1Nds28; D0Nds28; C23	Nucl; B530004O11Rik; D1Nds28; D0Nds28; C23
Mus musculus	RefSeq	ILMN_218288	ILMN_218288	NCL	NM_010880.3	NM_010880.3		17975	84875536	NM_010880.3	Ncl	NP_035010.3	ILMN_2723850	000630088	S	3268	TGTCAGAGGTCCAGTTTAACTAGGGATAATACAGTGGCCCTTGGCCTGTG	1	-	88246233-88246282	1qD	Mus musculus nucleolin (Ncl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Nucl; B530004O11Rik; D1Nds28; D0Nds28; C23	Nucl; B530004O11Rik; D1Nds28; D0Nds28; C23
Mus musculus	RefSeq	ILMN_223518	ILMN_223518	CHRD	NM_009893.1	NM_009893.1		12667	6753417	NM_009893.1	Chrd	NP_034023.1	ILMN_2765047	007320273	S	3173	GCACCAAGGGTTCCCTCACACCATTCCTGCTACCCCTGAGCTGAGCAGAG	16	+	20742355-20742404	16qB1	Mus musculus chordin (Chrd), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IDA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IDA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with syndecan, an integral membrane proteoglycan (250-300 kDa) associated largely with epithelial cells [goid 45545] [evidence IDA]	Chd	Chd
Mus musculus	RefSeq	ILMN_210850	ILMN_210850	TMEM46	NM_145463.3	NM_145463.3		219134	31343535	NM_145463.3	Tmem46	NP_663438.1	ILMN_2824801	005960392	S	2701	GGTTTATTTTTCCAGCAGCAGGAGCTATGAAATCCAGAGAAAAGCTCCCC	14	+	58585352-58585401	14qD1	Mus musculus transmembrane protein 46 (Tmem46), mRNA.				shisa; 9430059P22Rik; mShisa	shisa; 9430059P22Rik; mShisa
Mus musculus	RefSeq	ILMN_199416	ILMN_199416	OLFR319	NM_146500.1	NM_146500.1		258493	33238879	NM_146500.1	Olfr319	NP_666711.1	ILMN_2728212	001470685	S	581	AATATGAGCATATGATTGTCATGAGTGTCCTTGTCCTTGTGTTGCTCCCC	11	+	58504271-58504320	11qB1.3	Mus musculus olfactory receptor 319 (Olfr319), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR285-2; RP23-128D9.9; MGC129171	MOR285-2; RP23-128D9.9; MGC129171
Mus musculus	RefSeq	ILMN_185603	ILMN_237612	TPM4	NM_001001491.1	NM_001001491.1		326618	47894397	NM_001001491.1	Tpm4	NP_001001491.1	ILMN_2515363	004040037	S	1769	GATGTGGAGTGCTCTGTAGGCTGCACATTTTTTGGCTTTGTAGTTTTCCT	8	+	74676715-74676764	8qB3.3	Mus musculus tropomyosin 4 (Tpm4), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm [goid 2102] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185603	ILMN_237612	TPM4	NM_001001491.1	NM_001001491.1		326618	47894397	NM_001001491.1	Tpm4	NP_001001491.1	ILMN_1223539	007210747	S	167	AAGGAGATGCAGCCGCTCTCAACCGCCGCATCCAACTGCTGGAGGAGGAA	8	+	74662491-74662540	8qB3.3	Mus musculus tropomyosin 4 (Tpm4), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm [goid 2102] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210346	ILMN_210346	PILRB1	NM_133209.1	NM_133209.1		170741	18875355	NM_133209.1	Pilrb1	NP_573472.1	ILMN_1259100	004570204	S	632	GAGCCATGGTCACGATGCTCCTGGCTAAAGTTTTGGTCATAGTCCTAGTC	5	-	138298737-138298753:138298384-138298416	5qG2	Mus musculus paired immunoglobin-like type 2 receptor beta 1 (Pilrb1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Pilrb; FDFACT; Fdact	Pilrb; FDFACT; Fdact
Mus musculus	RefSeq	ILMN_193775	ILMN_254218	JMJD2C	NM_144787.1	NM_144787.1		76804	21450132	NM_144787.1	Jmjd2c	NP_659036.1	ILMN_2686994	001170066	S	3704	CCGGTGGGTGTATTTATATATATTTTCCACAGCCAGGGAAAGAGTCTCAC	4	+	74051284-74051333	4qC3	Mus musculus jumonji domain containing 2C (Jmjd2c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2410141F18Rik; Gasc1; AA517467	2410141F18Rik; Gasc1; AA517467
Mus musculus	RefSeq	ILMN_231262	ILMN_231262	EDIL3	NM_001037987.1	NM_001037987.1		13612	83921563	NM_001037987.1	Edil3	NP_001033076.1	ILMN_3124083	004780121	A	1848	TCCTTGGTCCTGGTATGGAAGGATCACTCTGCGGTCAGAGCTGCTGGGCT	13	+	89793960-89794009	13qC3	Mus musculus EGF-like repeats and discoidin I-like domains 3 (Edil3), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Del1	Del1
Mus musculus	RefSeq	ILMN_231262	ILMN_231262	EDIL3	NM_001037987.1	NM_001037987.1		13612	83921563	NM_001037987.1	Edil3	NP_001033076.1	ILMN_3048235	002340692	I	82	CCGCGGCAGCAGCGTGAGCCGTAGTCACTGCTGGCCGCTTCGCCTGCGGT	13	+	89295798-89295847	13qC3	Mus musculus EGF-like repeats and discoidin I-like domains 3 (Edil3), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Del1	Del1
Mus musculus	RefSeq	ILMN_212541	ILMN_323734	LOC100045228	XM_001473899.1	XM_001473899.1		100045228	149272050	XM_001473899.1	LOC100045228	XP_001473949.1	ILMN_1218482	005700201	S	3315	CCCTGGGTATATAATCTGGGTTCTGCCTCTGCCCTTGGGGACATGATATC					PREDICTED: Mus musculus similar to neuroligin 3 (LOC100045228), mRNA.					
Mus musculus	RefSeq	ILMN_223493	ILMN_223493	NUFIP1	NM_013745.4	NM_013745.4		27275	146134331	NM_013745.4	Nufip1	NP_038773.1	ILMN_2764790	001410044	S	3119	TTTCAATTCAAGAGTTATTTAACAGTGACCAAGGGTAGTATTTTAAAGAG				14qD3	Mus musculus nuclear fragile X mental retardation protein interacting protein 1 (Nufip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation [goid 8023] [evidence ISS]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence ISS]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISS]; A specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, synaptic vesicles, and a specialized cortical cytoskeletal matrix [goid 48786] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; Structures of variable diameter visible in the nucleoplasm by electron microscopy, mainly observed near the border of condensed chromatin. The fibrils are enriched in RNA, and are believed to be sites of pre-mRNA splicing and polyadenylylation representing the in situ form of nascent transcripts [goid 5726] [evidence ISS]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nufip	Nufip
Mus musculus	RefSeq	ILMN_185446	ILMN_231817	HIST2H2AA1	NM_013549.1	NM_013549.1		15267	20799906	NM_013549.1	Hist2h2aa1	NP_038577.1	ILMN_1231053	007050546	S	445	CTCGCGTCGGCCCGCGTCTCTGTGATATAACCCCCGCGAGCTCCTAAAAA	3	-	96043722-96043771	3qF2.1	Mus musculus histone cluster 2, H2aa1 (Hist2h2aa1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI448581; H2a-615; Hist2	AI448581; H2a-615; Hist2
Mus musculus	RefSeq	ILMN_195980	ILMN_210184	NCSTN	NM_021607.2	NM_021607.2		59287	31981204	NM_021607.2	Ncstn	NP_067620.2	ILMN_1228135	000460719	S	86	ACCACGGAAAAAGACAGAAGAAGAAGACCCCGACTTCCTGGGTCAGGCCC	1	-	174011406-174011447:174012732-174012739	1qH3	Mus musculus nicastrin (Ncstn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nct; Aph2; AA727311; 9430068N19Rik; Kiaa0253; mKIAA0253	Nct; Aph2; AA727311; 9430068N19Rik; Kiaa0253; mKIAA0253
Mus musculus	RefSeq	ILMN_210184	ILMN_210184	NCSTN	NM_021607.2	NM_021607.2		59287	31981204	NM_021607.2	Ncstn	NP_067620.2	ILMN_2914416	000450647	S	2595	CCCACTGTCCTTTCTCCAGGTGTGCAGATGGCATGTTAGTGTGGGCACGC	1	-	173996299-173996348	1qH3	Mus musculus nicastrin (Ncstn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nct; Aph2; AA727311; 9430068N19Rik; Kiaa0253; mKIAA0253	Nct; Aph2; AA727311; 9430068N19Rik; Kiaa0253; mKIAA0253
Mus musculus	RefSeq	ILMN_210184	ILMN_210184	NCSTN	NM_021607.2	NM_021607.2		59287	31981204	NM_021607.2	Ncstn	NP_067620.2	ILMN_1212949	000450326	S	24	TAGGGGCGGCTCTGGGCCTGACCCAGGAAGTCGGGGTCTTCTTCTTCTGT	1	-	174012752-174012801	1qH3	Mus musculus nicastrin (Ncstn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nct; Aph2; AA727311; 9430068N19Rik; Kiaa0253; mKIAA0253	Nct; Aph2; AA727311; 9430068N19Rik; Kiaa0253; mKIAA0253
Mus musculus	RefSeq	ILMN_210184	ILMN_210184	NCSTN	NM_021607.2	NM_021607.2		59287	31981204	NM_021607.2	Ncstn	NP_067620.2	ILMN_2914418	002340138	S	2495	GCTGCACCAGGAAGAGGGTGTGAAAGATTGTGCATCTGCATTCAACTACC	1	-	173996399-173996448	1qH3	Mus musculus nicastrin (Ncstn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nct; Aph2; AA727311; 9430068N19Rik; Kiaa0253; mKIAA0253	Nct; Aph2; AA727311; 9430068N19Rik; Kiaa0253; mKIAA0253
Mus musculus	RefSeq	ILMN_197091	ILMN_197091	LOC214403	XM_129490.4	XM_129490.4			38073957	XM_129490.4	LOC214403		ILMN_2526875	007510270	S	1698	TGGGGTAGCCTGCTACATGGGAAAATGGAGCACTCCACCTCGCTGTGTTG										
Mus musculus	MEEBO	ILMN_188749	ILMN_188749	4933430H15RIK	scl21993.14_154				51708190	XM_135711	4933430H15Rik		ILMN_2455380	001030121	S	14	GCTTAGGAGACGAAAGCCACGGAGACTTGGGCTAACAGGAGGAAGAGACA										
Mus musculus	RefSeq	ILMN_212576	ILMN_212576	LHFP	NM_175386.3	NM_175386.3		108927	34328412	NM_175386.3	Lhfp	NP_780595.1	ILMN_1220198	005420538	S	1902	GGTGAGAATTCAGTTGCAGATTTGAGAGTGAGGAGAGCTTTCTCCAGTTG	3	+	53065414-53065463	3qC	Mus musculus lipoma HMGIC fusion partner (Lhfp), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2810489O06Rik; AI194968	2810489O06Rik; AI194968
Mus musculus	RefSeq	ILMN_212576	ILMN_212576	LHFP	NM_175386.3	NM_175386.3		108927	34328412	NM_175386.3	Lhfp	NP_780595.1	ILMN_2746887	004260544	S	724	CCCTGATGGGTTGCTGCGTGTCGGAACTCATCTCCAGGACTGTAGGAAGA	3	+	52847536-52847585	3qC	Mus musculus lipoma HMGIC fusion partner (Lhfp), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2810489O06Rik; AI194968	2810489O06Rik; AI194968
Mus musculus	RefSeq	ILMN_212576	ILMN_212576	LHFP	NM_175386.3	NM_175386.3		108927	34328412	NM_175386.3	Lhfp	NP_780595.1	ILMN_2879588	003360431	S	1838	AGTGAACTGAGTAGCTTCTGCTGTAACAACCTCACGTAGAACAGGACAGC	3	+	53065350-53065399	3qC	Mus musculus lipoma HMGIC fusion partner (Lhfp), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2810489O06Rik; AI194968	2810489O06Rik; AI194968
Mus musculus	RefSeq	ILMN_196413	ILMN_196413	5330427M13RIK	XM_140850.3	XM_140850.3			38074422	XM_140850.3	5330427M13Rik		ILMN_2524061	002370519	S	3350	CAGAGATGCTGGATGTCTTTGTCCTGATGTAACGGTTAGGGTTGACTCCC										
Mus musculus	RefSeq	ILMN_196413	ILMN_196413	5330427M13RIK	XM_140850.3	XM_140850.3			38074422	XM_140850.3	5330427M13Rik		ILMN_2524062	001940528	S	2974	CAGACAACTCATGTGTGGGGGCTCTACTGAGTTCTGCTCAGTGTGATAAC										
Mus musculus	RefSeq	ILMN_192288	ILMN_235038	ATG4D	NM_153583.9	NM_153583.9		235040	142368974	NM_153583.9	Atg4d	NP_705811.8	ILMN_1243563	001170195	S	2240	AAGAAGGCCAGGCTGCTGGGTCCCACGGTGACACTTGGAGGTCACAAGTT	9	+	21078511-21078560	9qA3	Mus musculus autophagy-related 4D (yeast) (Atg4d), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any multimeric complex connected to a microtubule [goid 5875] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of directing proteins towards the vacuole using signals contained within the protein [goid 6623] [evidence ISS]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [evidence ISS]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence ISS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISS]	9830134P12Rik; Atg4dl; MGC31226; Autl4; Apg4d; APG4-D	9830134P12Rik; Atg4dl; MGC31226; Autl4; Apg4d; APG4-D
Mus musculus	RefSeq	ILMN_188027	ILMN_235038	ATG4D	NM_153583.9	NM_153583.9		235040	142368974	NM_153583.9	Atg4d	NP_705811.8	ILMN_2601710	002230020	S	2309	CTAAGGTCTCAGCCTGGGGTGTCTTCTGGTCAGCTCCATTGGGTGTGAAC	9	+	21078580-21078629	9qA3	Mus musculus autophagy-related 4D (yeast) (Atg4d), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any multimeric complex connected to a microtubule [goid 5875] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of directing proteins towards the vacuole using signals contained within the protein [goid 6623] [evidence ISS]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [evidence ISS]; The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence ISS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISS]	9830134P12Rik; Atg4dl; MGC31226; Autl4; Apg4d; APG4-D	9830134P12Rik; Atg4dl; MGC31226; Autl4; Apg4d; APG4-D
Mus musculus	RefSeq	ILMN_199226	ILMN_239921	MYO15B	XM_981684.2	XM_981684.2		217328	149262701	XM_981684.2	Myo15b	XP_986778.2	ILMN_1219746	005550056	S	3731	GGCCTAACTTGGAGACTGAGAAGGAAAGAGCAGGGTTGCTTCGGGTGTTG					PREDICTED: Mus musculus myosin XVB (Myo15b), mRNA.					
Mus musculus	RefSeq	ILMN_213044	ILMN_213044	PHOX2A	NM_008887.1	NM_008887.1		11859	6679398	NM_008887.1	Phox2a	NP_032913.1	ILMN_1243025	000510139	S	1139	CCTGTCCCTCACTCAGTGCCCAATCATAAAGGGTCCTAAGAAGCCGAGCC	7	+	108970947-108970996	7qE3	Mus musculus paired-like homeobox 2a (Phox2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of somatic motor neurons. Somatic motor neurons innervate skeletal muscle targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21523] [evidence IMP]; Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment [goid 43576] [evidence IMP]; The process whose specific outcome is the progression of the parasympathetic nervous system over time, from its formation to the mature structure. The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia [goid 48486] [evidence IMP]; The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [goid 48485] [evidence IMP]; The process whose specific outcome is the progression of the locus ceruleus over time, from its formation to the mature structure. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic [goid 21703] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Arix; Pmx2; Phox2; Pmx2a	Arix; Pmx2; Phox2; Pmx2a
Mus musculus	RefSeq	ILMN_210142	ILMN_247445	EG269105	XM_913807.2	XM_913807.2		269105	94363146	XM_913807.2	EG269105	XP_918900.1	ILMN_2602633	002690148	S	295	GCCCTGAAGATTCCTGTGCCTGAGGATAAATACACAGCCCTGGTGGACCA				1qA3	PREDICTED: Mus musculus predicted gene, EG269105 (EG269105), mRNA.					
Mus musculus	RefSeq	ILMN_236930	ILMN_236930	DYNC1I2	NM_010064.1	NM_010064.1		13427	6753657	NM_010064.1	Dync1i2	NP_034194.1	ILMN_2995290	006420692	S	2280	CCGCACTAAGTACATACCTCCGTGTCAGTGGTGTTCTTCCTGTCCAAGTG	2	+	71063970-71064019	2qC2	Mus musculus dynein cytoplasmic 1 intermediate chain 2 (Dync1i2), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	AW554389; Dncic2; 3110079H08Rik	AW554389; Dncic2; 3110079H08Rik
Mus musculus	RefSeq	ILMN_196498	ILMN_196498	AW049900	XM_129295.5	XM_129295.5			38085145	XM_129295.5	AW049900		ILMN_1249034	001340296	S	906	GAAGAAGGTGGGGTCTGAAAGTTCGTCTGCTGTCCCCTGTCCAAACCACC										
Mus musculus	RefSeq	ILMN_210357	ILMN_210357	ATP5E	NM_025983.3	NM_025983.3		67126	114158704	NM_025983.3	Atp5e	NP_080259.1	ILMN_2604794	006280612	S	203	CGAACGCTGAGAAGACTTCGGGCAGCAGCATAAAAATTGTGAAAGTCTCG	2	-	174288015-174288064	2qH4	Mus musculus ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit (Atp5e), nuclear gene encoding mitochondrial protein, mRNA.	The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled [goid 45261] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [evidence ISA]	The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence ISA]	2410043G19Rik; ATPE; AV000645	2410043G19Rik; ATPE; AV000645
Mus musculus	RefSeq	ILMN_200086	ILMN_200086	LOC385751	XM_358930.1	XM_358930.1			38080288	XM_358930.1	LOC385751		ILMN_1218140	005870168	S	839	CCTCTGACCAATGGAATAGAATGGAAGACGCAAAAATGAACCCACACACC										
Mus musculus	RefSeq	ILMN_210596	ILMN_210596	PRDX6	NM_007453.3	NM_007453.3		11758	142378927	NM_007453.3	Prdx6	NP_031479.1	ILMN_2623947	005090440	S	2241	CCCCAGGGGCTCAGATTACAAATGTTACCATCATGCCCTATGCCATCAGC	1	-	163170286-163170335	1qH2.1	Mus musculus peroxiredoxin 6 (Prdx6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The assembly of a bleb, a cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32060] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IMP]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	ORF06; Prdx6-rs3; Brp-12; 9430088D19Rik; Aop2; Prdx5; Lvtw-4; CP-3; Ltw4; aiPLA2; Aop2-rs3; mKIAA0106; Ltw-4; KIAA0106; AA690119; 1-cysPrx; GPx	ORF06; Prdx6-rs3; Brp-12; 9430088D19Rik; Aop2; Prdx5; Lvtw-4; CP-3; Ltw4; aiPLA2; Aop2-rs3; mKIAA0106; Ltw-4; KIAA0106; AA690119; 1-cysPrx; GPx
Mus musculus	RefSeq	ILMN_220939	ILMN_220939	ABCG2	NM_011920.3	NM_011920.3		26357	110815847	NM_011920.3	Abcg2	NP_036050.1	ILMN_2728879	002360102	S	2390	TTGCCTACCTGAAATTGTTGTTTCTTAAAAAGTATTCTTAATTTCCCCTT	6	+	58642344-58642384:58642385-58642393	6qB3	Mus musculus ATP-binding cassette, sub-family G (WHITE), member 2 (Abcg2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	BCRP; Bcrp1; MXR; ABC15; ABCP; AI428558; MXR1	BCRP; Bcrp1; MXR; ABC15; ABCP; AI428558; MXR1
Mus musculus	Riken	ILMN_202872	ILMN_202872	A130075K23RIK	ri|A130075K23|PX00124D20|AK038067|555					AK038067	A130075K23Rik		ILMN_1217850	006770066	S	325	GCTAGAAATGAGGGTTGTACATTACAGACAGCCATGCACAGGGAGGCAGG										
Mus musculus	RefSeq	ILMN_202813	ILMN_322950	LOC100040938	XM_001475521.1	XM_001475521.1		100040938	149233787	XM_001475521.1	LOC100040938	XP_001475571.1	ILMN_1214211	001770193	S	2128	GACACAGGGTTCATCCTGGCCCAGCAGCTGAATTTATGTTTGGTGCTCTC	1	-	34472666-34472715	1qB	PREDICTED: Mus musculus hypothetical protein LOC100040938 (LOC100040938), mRNA.					
Mus musculus	MEEBO	ILMN_184570	ILMN_184570	D030063E12	scl47266.1.808_307						D030063E12		ILMN_2419748	001510626	S	17	GGGATTCTGGGTCAGCTCTTACCCTTGGCAACATGTACCTGTGGAGTTTT										
Mus musculus	MEEBO	ILMN_194794	ILMN_194794	WDT2	scl00116971.1_124				53749211	NM_001005423	Wdt2		ILMN_2509661	001400538	S	20	TCGCATGCACGCGTACGTAAGCTTGGATCCTCTAGAGCGGCCGCCCTTTT										
Mus musculus	MEEBO	ILMN_211967	ILMN_211967	D7ERTD413E	scl0052325.1_20	NM_177468.2			31343379	NM_177468.2	D7Ertd413e		ILMN_2621268	005910477	S	1348	CTTGCAGGTTTTGCTGTGGGCACAAGCCTTTATGCATTTGTACTTTATGC										
Mus musculus	MEEBO	ILMN_187165	ILMN_187165	9430014F16RIK	scl11651.1.1_162						9430014F16Rik		ILMN_2441724	001340204	S	5	CTCCCCAATTTTCATCCGCAGACTTCAAGGATGGCTCCTGCATACAGCTG										
Mus musculus	RefSeq	ILMN_205754	ILMN_312023	NBEAL1	NM_173444.2	NM_173444.2		269198	153791556	NM_173444.2	Nbeal1	NP_775620.2	ILMN_1237873	004490743	S	4069	GCAGTCCCAGCCAGATGCAGCATACCAGATATCACAACAAGTGGGTTGGC				1qC2	Mus musculus neurobeachin like 1 (Nbeal1), mRNA.				ALS2CR17; A530083I02Rik; A530050O19Rik	ALS2CR17; A530083I02Rik; A530050O19Rik
Mus musculus	RefSeq	ILMN_189790	ILMN_312023	NBEAL1	NM_173444.2	NM_173444.2		269198	153791556	NM_173444.2	Nbeal1	NP_775620.2	ILMN_2464393	001240670	S	6025	CGGCAGATTAGAAGTCACTACTCAACACATTTACTTCCATGATAACAGTG				1qC2	Mus musculus neurobeachin like 1 (Nbeal1), mRNA.				ALS2CR17; A530083I02Rik; A530050O19Rik	ALS2CR17; A530083I02Rik; A530050O19Rik
Mus musculus	RefSeq	ILMN_216873	ILMN_312023	NBEAL1	NM_173444.2	NM_173444.2		269198	153791556	NM_173444.2	Nbeal1	NP_775620.2	ILMN_1246260	000380309	S	8800	GTTAAAGTCCCTTAACCTAAGTAGCAAAATTCAAAATATTCCTAATAAAG				1qC2	Mus musculus neurobeachin like 1 (Nbeal1), mRNA.				ALS2CR17; A530083I02Rik; A530050O19Rik	ALS2CR17; A530083I02Rik; A530050O19Rik
Mus musculus	RefSeq	ILMN_260778	ILMN_260778	OLFR1028	NM_001011774.1	NM_001011774.1		257936	58801323	NM_001011774.1	Olfr1028	NP_001011774.1	ILMN_3161438	002350176	S	921	AAACGTCATCAGGACAGCATTGATGCGTCCACCTTCCAACAAACTGCAAC	2	+	85792142-85792191	2qD	Mus musculus olfactory receptor 1028 (Olfr1028), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR198-6_p; MOR198-4	MOR198-6_p; MOR198-4
Mus musculus	RefSeq	ILMN_200332	ILMN_200332	LOC386252	XM_359139.1	XM_359139.1			38081334	XM_359139.1	LOC386252		ILMN_1246635	002190441	S	928	CAACAACCACTGAAAACTTCGCCTCACAGACGTATGTCTTCGGAGAACCC										
Mus musculus	Riken	ILMN_202379	ILMN_202379	4930547K05RIK	ri|4930547K05|PX00034F18|AK016057|1511					AK016057	4930547K05Rik		ILMN_1223513	006860376	S	619	TGCCTGTCACAATGTAATAAAAAGATGCCAGCAGAGGGACACTAACCAAG										
Mus musculus	RefSeq	ILMN_210477	ILMN_313236	LOC100044317	XM_001471589.1	XM_001471589.1		100044317	149272194	XM_001471589.1	LOC100044317	XP_001471639.1	ILMN_2620683	001430632	S	163	CAAAGTTGAAGAAAACTAATACTGAAGTAAAAAATACTCTTCCGTCGAAT					PREDICTED: Mus musculus hypothetical protein LOC100044317 (LOC100044317), mRNA.					
Mus musculus	RefSeq	ILMN_220638	ILMN_220638	5930416I19RIK	NM_197981.1	NM_197981.1		72440	37574051	NM_197981.1	5930416I19Rik	NP_932098.1	ILMN_2724719	001050424	S	1359	CCAGAGTCGGAGTTCGGTTTCTAGGGTTCCGCCTCGCACCAGGAACCGTT	6	-	128307507-128307556	6qF3	Mus musculus RIKEN cDNA 5930416I19 gene (5930416I19Rik), mRNA.				2510047L19Rik	2510047L19Rik
Mus musculus	MEEBO	ILMN_213648	ILMN_213648	CLN5	scl46010.5_526	XM_127882.3			28480796	XM_127882.3	Cln5		ILMN_2639291	003890445	S	2314	GCTTTCCAGCACTCTTCAGATTGTGGCCTTTAGACCGGTATCTGTGCACC						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; The volume enclosed within the vacuolar membrane [goid 5775] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_219665	ILMN_219665	MRPL1	NM_053158.2	NM_053158.2		94061	84875527	NM_053158.2	Mrpl1	NP_444388.2	ILMN_2747281	000830221	S	856	GACCAGATAGCTGCCAATCTTCAAGCAGTTATAAATGAGGTCTGTAAGCA	5	+	96691096-96691145	5qE3	Mus musculus mitochondrial ribosomal protein L1 (Mrpl1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AI462572; 2410002L03Rik; 5830418D04Rik	AI462572; 2410002L03Rik; 5830418D04Rik
Mus musculus	RefSeq	ILMN_209492	ILMN_209492	OLFR877	NM_146417.1	NM_146417.1		258412	33239251	NM_146417.1	Olfr877	NP_666529.1	ILMN_1243598	006980082	S	871	AGCCTGAGGAATAAGGATGTCAAAATTGCTCTGAAGAAAACCTTGAGCAG	9	+	37663275-37663324	9qA4	Mus musculus olfactory receptor 877 (Olfr877), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR161-5	MOR161-5
Mus musculus	Riken	ILMN_204323	ILMN_204323	USP23	ri|4732494L18|PX00052N15|AK029124|2707					AK029124	Usp23		ILMN_1240421	002680048	S	2360	CCACATTTGGGCAGGGGGTACTGTGTGGACCACGAGGGGATGGATCAGAT										
Mus musculus	RefSeq	ILMN_214675	ILMN_214675	4933440H19RIK	NM_194335.1	NM_194335.1		71254	37059815	NM_194335.1	4933440H19Rik	NP_919316.1	ILMN_2805908	003520551	S	2726	AGCAGCAGAATGGCCTGCTACAGATGATCCGGCGTTCTCAGGAGGTGCAG	2	+	32277038-32277087	2qB	Mus musculus RIKEN cDNA 4933440H19 gene (4933440H19Rik), mRNA.				2310007O20Rik	2310007O20Rik
Mus musculus	RefSeq	ILMN_211393	ILMN_211393	DNAJC18	NM_029669.3	NM_029669.3		76594	142377320	NM_029669.3	Dnajc18	NP_083945.1	ILMN_2615369	004010762	S	2327	CTGAGTGCCCTGCACATTTTAGTGTGAGATAGTGATGTGACCTTTCACCC	18	-	35833526-35833575	18qB2	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 18 (Dnajc18), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	2700075B01Rik	2700075B01Rik
Mus musculus	RefSeq	ILMN_185498	ILMN_232682	MACROD2	NM_028387.1	NM_028387.1		72899	78214344	NM_028387.1	Macrod2	NP_082663.1	ILMN_1257817	005700097	S	229	CCCCCACGGCAGCATGTACCCCAGCAACAAGAAGAAAAAGGTGTGGAGAG	2	+	140221399-140221448	2qF3	Mus musculus MACRO domain containing 2 (Macrod2), transcript variant 2, mRNA.				2610107G07Rik; 1110033L15Rik; 2900006F19Rik; MGC100276	2610107G07Rik; 1110033L15Rik; 2900006F19Rik; MGC100276
Mus musculus	RefSeq	ILMN_196163	ILMN_232682	MACROD2	NM_028387.1	NM_028387.1		72899	78214344	NM_028387.1	Macrod2	NP_082663.1	ILMN_1226796	003940709	S	3217	GAGTACATACCTATGTAAAGGTGTGGCTTTGCTTTAGTCTTCCCCAGCGA	2	+	140248355-140248404	2qF3	Mus musculus MACRO domain containing 2 (Macrod2), transcript variant 2, mRNA.				2610107G07Rik; 1110033L15Rik; 2900006F19Rik; MGC100276	2610107G07Rik; 1110033L15Rik; 2900006F19Rik; MGC100276
Mus musculus	Riken	ILMN_204814	ILMN_204814	C630007L23RIK	ri|C630007L23|PX00083C24|AK049893|2917					AK049893	C630007L23Rik		ILMN_2567817	006480500	S	2749	CCTTCACCATGGACTTTTAAATCAGGCAGAAGTGCAGTTAATCCCTTAGG										
Mus musculus	RefSeq	ILMN_199368	ILMN_199368	GSDMC1	NM_031378.3	NM_031378.3		83492	142381263	NM_031378.3	Gsdmc1	NP_113555.1	ILMN_1257797	000130241	S	968	GACCTTTCCAATGAGATTTGTGGGAATGTCTGGACATCTAAGATATCAGG	15	-	63611567-63611616	15qD1	Mus musculus gasdermin C1 (Gsdmc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]			Gsdmc1	Gsdmc1
Mus musculus	RefSeq	ILMN_199368	ILMN_199368	GSDMC1	NM_031378.3	NM_031378.3		83492	142381263	NM_031378.3	Gsdmc1	NP_113555.1	ILMN_1240230	000870193	S	534	AAGGCTGACCTGGATGTCGAAACCATTGCAGGAGGAGAAGCAGGGTTTGT	15	-	63635205-63635254	15qD1	Mus musculus gasdermin C1 (Gsdmc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]			Gsdmc1	Gsdmc1
Mus musculus	MEEBO	ILMN_216718	ILMN_216718	CGB	scl0094225.1_182	NM_053189.1			16716486	NM_053189.1	Cgb		ILMN_2674434	004040682	S	288	GACCCCGTGGTCTCCGTTCCCGTGGCTCTCAGCTGTCGTTGTGCACTCTG										
Mus musculus	RefSeq	ILMN_197900	ILMN_197900	LOC242377	XM_143698.1	XM_143698.1			20825394	XM_143698.1	LOC242377		ILMN_2529760	000940196	S	1098	GGCTCTGGCAATGACCGCACTGGACGTCATCTTTAAGCCTGCATTGCTCG										
Mus musculus	RefSeq	ILMN_198449	ILMN_198449	LOC381230	XM_355167.1	XM_355167.1			38085190	XM_355167.1	LOC381230		ILMN_1219510	005890161	S	246	CACTGTGCGAGAAAAAGCAGATGGTGGTCCCTGCTGCCCTCAAGGTTGTG										
Mus musculus	RefSeq	ILMN_231407	ILMN_231407	OTTMUSG00000017827	NM_001081476.1	NM_001081476.1		628053	125490330	NM_001081476.1	OTTMUSG00000017827	NP_001074945.1	ILMN_2871648	006520202	S	308	CCTGGGTATGAGCGCACCAGCCACTCATGTTACCTTAGATATGGCCGGAC	X	+	67745403-67745452	XqA7.2	Mus musculus predicted gene, OTTMUSG00000017827 (OTTMUSG00000017827), mRNA.					
Mus musculus	Riken	ILMN_204265	ILMN_204265	N4WBP5-PENDING	ri|C820018D16|PX00088B05|AK050560|1393					AK050560	N4wbp5-pending		ILMN_1258613	001990377	S	821	TCTCTGGCAGATGTTTTCTGGCAAAGGCTTCCTGCACTGATGAAGTCCCC										
Mus musculus	RefSeq	ILMN_213285	ILMN_213285	ATL3	NM_146091.3	NM_146091.3		109168	142380963	NM_146091.3	Atl3	NP_666203.2	ILMN_2635606	000020768	S	1715	GCCAATGCCATCACGGGTCCAATTCCAGAGGAATGGCAGATCTGAGACCA	19	+	7608576-7608625	19qA	Mus musculus atlastin GTPase 3 (Atl3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	4633402C03Rik; AI465397; MGC28761	4633402C03Rik; AI465397; MGC28761
Mus musculus	RefSeq	ILMN_213285	ILMN_213285	ATL3	NM_146091.3	NM_146091.3		109168	142380963	NM_146091.3	Atl3	NP_666203.2	ILMN_2671829	003370008	S	33	AGGCTCCATGTTGTCCCCTCAGCGAACTGCAGCGGTGGCATCGAGAGGAG	19	+	7569099-7569105:7569106-7569148	19qA	Mus musculus atlastin GTPase 3 (Atl3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	4633402C03Rik; AI465397; MGC28761	4633402C03Rik; AI465397; MGC28761
Mus musculus	RefSeq	ILMN_213285	ILMN_213285	ATL3	NM_146091.3	NM_146091.3		109168	142380963	NM_146091.3	Atl3	NP_666203.2	ILMN_1241909	000460040	S	2448	CAGATTGTAAGGCCTTACACCGAGGAGGCTGGCAGTTTTGTCGACATTGC	19	+	7609309-7609358	19qA	Mus musculus atlastin GTPase 3 (Atl3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	4633402C03Rik; AI465397; MGC28761	4633402C03Rik; AI465397; MGC28761
Mus musculus	RefSeq	ILMN_219187	ILMN_219187	ASAH3	NM_175731.3	NM_175731.3		171168	141802077	NM_175731.3	Asah3	NP_783858.1	ILMN_2705390	005310100	S	1456	CAAAGCTTGATTTTCTGCTCCACAGTATTCAGCTTGCATAGCCCTGAGGG	17	-	57093836-57093885	17qD	Mus musculus N-acylsphingosine amidohydrolase (alkaline ceramidase) 3 (Asah3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids [goid 19216] [evidence IDA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of ceramides, any N-acetylated sphingoid [goid 46514] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine [goid 17040] [evidence IDA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]	AI662009; Cer1; 2310024P18Rik	AI662009; Cer1; 2310024P18Rik
Mus musculus	RefSeq	ILMN_199953	ILMN_199953	LOC384105	XM_357430.1	XM_357430.1			38079179	XM_357430.1	LOC384105		ILMN_1237025	001740739	S	173	TGGCAACAGATGGCACTGGCAAACCCGAGAAGCTGCTGTATGCCGTCTCC										
Mus musculus	RefSeq	ILMN_222206	ILMN_222206	NALCN	NM_177393.4	NM_177393.4		338370	123173781	NM_177393.4	Nalcn	NP_796367.3	ILMN_2746248	004810438	S	818	GATCCGGGCTTTCAGGATTTATTTCCGATTCGAACTGCCAAGGACAAGAA	14	-	123992149-123992198	14qE5	Mus musculus sodium leak channel, non-selective (Nalcn), mRNA. XM_904119	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	A530023G15Rik; Vgcnl1	A530023G15Rik; Vgcnl1
Mus musculus	RefSeq	ILMN_217159	ILMN_222206	NALCN	NM_177393.4	NM_177393.4		338370	123173781	NM_177393.4	Nalcn	NP_796367.3	ILMN_1234979	003170050	S	5571	GACCTCCTGGATATTTAGATGGGAAGCAAGGCATAGGGAGTCCTAGGGTG	14	-	123677357-123677389:123677390-123677406	14qE5	Mus musculus sodium leak channel, non-selective (Nalcn), mRNA. XM_904119	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	A530023G15Rik; Vgcnl1	A530023G15Rik; Vgcnl1
Mus musculus	RefSeq	ILMN_211910	ILMN_211910	D18ERTD653E	NM_172631.2	NM_172631.2		52662	31324574	NM_172631.2	D18Ertd653e	NP_766219.2	ILMN_2897281	002600164	S	2018	GGTGTGCCAAGGTTTTAAAGTTGGAGAAGTTAGACGAGTGAGAGGAAGTG	18	+	68380443-68380492	18qE2	Mus musculus DNA segment, Chr 18, ERATO Doi 653, expressed (D18Ertd653e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			A430108L08Rik; C18orf1; A430083H02; D330030L18Rik; 8230401C20Rik	A430108L08Rik; C18orf1; A430083H02; D330030L18Rik; 8230401C20Rik
Mus musculus	RefSeq	ILMN_188694	ILMN_240985	LHX8	NM_010713.2	NM_010713.2		16875	113195679	NM_010713.2	Lhx8	NP_034843.2	ILMN_2454905	004590300	S	1205	TATTCTGCCTACGTACCCCAGGATGGGACGATGCTGACTGCGCTGCACTC	3	-	153974514-153974563	3qH4	Mus musculus LIM homeobox protein 8 (Lhx8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IMP]; The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell [goid 21884] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain [goid 21879] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Lhx7; L3	Lhx7; L3
Mus musculus	RefSeq	ILMN_210108	ILMN_210108	HRSP12	NM_008287.2	NM_008287.2		15473	40807497	NM_008287.2	Hrsp12	NP_032313.2	ILMN_1251300	003780563	S	334	TGACTTTGGCACTGTCAATGAGATCTATAAAACATATTTCCAGGGTAGCC	15	-	34415395-34415410:34416366-34416399	15qB3.1	Mus musculus heat-responsive protein 12 (Hrsp12), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HRP12; HR12	HRP12; HR12
Mus musculus	RefSeq	ILMN_210108	ILMN_210108	HRSP12	NM_008287.2	NM_008287.2		15473	40807497	NM_008287.2	Hrsp12	NP_032313.2	ILMN_2816876	006450494	S	351	ATGAGATCTATAAAACATATTTCCAGGGTAGCCTTCCTGCCAGGGCTGCT	15	-	34415378-34415410:34416366-34416382	15qB3.1	Mus musculus heat-responsive protein 12 (Hrsp12), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HRP12; HR12	HRP12; HR12
Mus musculus	RefSeq	ILMN_210108	ILMN_210108	HRSP12	NM_008287.2	NM_008287.2		15473	40807497	NM_008287.2	Hrsp12	NP_032313.2	ILMN_2610706	005390039	S	167	ACATTTCTGGACAGGTAGGCCTGGATCCTTCCAGTGGACAGCTTGTGCCA	15	-	34418356-34418405	15qB3.1	Mus musculus heat-responsive protein 12 (Hrsp12), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HRP12; HR12	HRP12; HR12
Mus musculus	RefSeq	ILMN_210108	ILMN_210108	HRSP12	NM_008287.2	NM_008287.2		15473	40807497	NM_008287.2	Hrsp12	NP_032313.2	ILMN_2610703	006180445	S	172	TTCTGGACAGGTAGGCCTGGATCCTTCCAGTGGACAGCTTGTGCCAGGAG	15	-	34418351-34418400	15qB3.1	Mus musculus heat-responsive protein 12 (Hrsp12), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HRP12; HR12	HRP12; HR12
Mus musculus	RefSeq	ILMN_213774	ILMN_257923	OLFR212	NM_001011800.2	NM_001011800.2		258019	74271897	NM_001011800.2	Olfr212	NP_001011800.1	ILMN_1250164	004260592	S	2139	GGTCTCCATGCCAATGAAATGCAAATAATTCAGGAGAAATTTCCTCAGAG	6	+	116467450-116467499	6qE3	Mus musculus olfactory receptor 212 (Olfr212), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR119-4; 4931403F16Rik	MOR119-4; 4931403F16Rik
Mus musculus	RefSeq	ILMN_210001	ILMN_210001	CTSM	NM_022326.3	NM_022326.3		64139	153792607	NM_022326.3	Ctsm	NP_071721.2	ILMN_1235814	005130674	S	1137	GTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATA				13qB3	Mus musculus cathepsin M (Ctsm), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	Catm; AI324100; 1600027J17Rik	Catm; AI324100; 1600027J17Rik
Mus musculus	Riken	ILMN_202150	ILMN_202150	3110003L01RIK	ri|3110003L01|ZX00070D07|AK013987|1280					AK013987	3110003L01Rik		ILMN_2547383	003460059	S	866	CCAGAGGTGCTGCACAATCGCTACCTCCATGGGAGCCAGGGCCGCCATCT										
Mus musculus	Riken	ILMN_205704	ILMN_205704	FBN1	ri|B430209H23|PX00071I02|AK046621|1927					AK046621	Fbn1		ILMN_2574595	004390240	S	107	AGTCGCCGGGTTCTGGCTCTGCAGCTAGTTGGGATCGAGTGGTCCTCGTT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins [goid 1527] [evidence TAS]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192481	ILMN_192481	2600010L24RIK	scl25906.1_29						2600010L24Rik		ILMN_2488472	006290730	S	15	TTCCTGTTCATGTATTGAGTAATTTGGTTCATATAGTTTTGTCCCTGAAT										
Mus musculus	RefSeq	ILMN_219592	ILMN_219592	AVP	NM_009732.1	NM_009732.1		11998	6753149	NM_009732.1	Avp	NP_033862.1	ILMN_2710928	001240746	S	370	TTTTTCCGCCTCACCCGCGCTCGGGAGCCAAGCAACGCCACACAGCTGGA	2	-	130406500-130406549	2qF1	Mus musculus arginine vasopressin (Avp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of renal water excretion [goid 30146] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30819] [evidence IDA]; A decrease in the diameter of blood vessels, especially arteries, usually causing an increase in blood pressure [goid 42310] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA];  [goid 5185] [evidence IEA]	Vp; Vsp	Vp; Vsp
Mus musculus	Riken	ILMN_204139	ILMN_204139	B230323D24RIK	ri|B230323D24|PX00159L22|AK045917|2270					AK045917	B230323D24Rik		ILMN_1213297	004810681	S	2220	TGTGCCCAATGTAGACCCAACTCAGATGTCATTAAACTTACCTGGGTTCC										
Mus musculus	RefSeq	ILMN_215954	ILMN_251885	BAIAP2L1	NM_025833.3	NM_025833.3		66898	92110034	NM_025833.3	Baiap2l1	NP_080109.1	ILMN_2665609	003710731	S	2811	GAGAAATTATCCCCAAATTGGTCCGGGTCTATGTACAGGAAACGCCGTCC	5	-	145025781-145025830	5qG2	Mus musculus BAI1-associated protein 2-like 1 (Baiap2l1), mRNA.		The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	1300006M19Rik; AI585895	1300006M19Rik; AI585895
Mus musculus	Riken	ILMN_205677	ILMN_205677	5430426F23RIK	ri|D030020H07|PX00179H20|AK050799|2645					AK050799	5430426F23Rik		ILMN_1246868	001740475	S	2250	TCACACTCGGGTCATCAAACTCACATTGACCGGCTTGGTGACAAGGGCCC										
Mus musculus	RefSeq	ILMN_220695	ILMN_220695	SYTL3	NM_183370.1	NM_183370.1		83672	34368587	NM_183370.1	Sytl3	NP_899226.1	ILMN_3077961	006450241	I	273	GCCCTGCTGGTGTATGGGGTGTGTAAATTCACCGAAACACGCATCTCCCG	17	+	6913310-6913339:6913449-6913468	17qA1	Mus musculus synaptotagmin-like 3 (Sytl3), transcript variant 5, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IDA]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]	A430092N21; Slp3-b; Slp3-a; Slp3; mFLJ00307; MGC117869	A430092N21; Slp3-b; Slp3-a; Slp3; mFLJ00307; MGC117869
Mus musculus	RefSeq	ILMN_220695	ILMN_220695	SYTL3	NM_183370.1	NM_183370.1		83672	34368587	NM_183370.1	Sytl3	NP_899226.1	ILMN_3157081	003190379	A	1320	AGGCTTGGTTCAAAGGGAGGTGCTGCGGGTTGTCCCGACTCAGGTTCACA	17	+	6942099-6942148	17qA1	Mus musculus synaptotagmin-like 3 (Sytl3), transcript variant 5, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IDA]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]	A430092N21; Slp3-b; Slp3-a; Slp3; mFLJ00307; MGC117869	A430092N21; Slp3-b; Slp3-a; Slp3; mFLJ00307; MGC117869
Mus musculus	RefSeq	ILMN_220496	ILMN_220496	B430203M17RIK	NM_177096.2	NM_177096.2		320193	31342796	NM_177096.2	B430203M17Rik	NP_796070.1	ILMN_1217999	004900196	S	2452	GAAGTTTAATTCAGGTCATTATGGAAATTTAAAGCCATTTTCTTCAATAA	19	+	32883487-32883536	19qC1	Mus musculus RIKEN cDNA B430203M17 gene (B430203M17Rik), mRNA.					
Mus musculus	Riken	ILMN_205097	ILMN_205097	D630050P10RIK	ri|D630050P10|PX00198J03|AK052779|2533					AK052779	D630050P10Rik		ILMN_1213065	003890402	S	2345	CATGTGGCTCAATCTGTCTTAGAACTTACCATGCAGACCGGGGTGGCCTG										
Mus musculus	Riken	ILMN_205406	ILMN_205406	2400010G15RIK	ri|E030049E20|PX00207G22|AK053241|3168					AK053241	2400010G15Rik		ILMN_2572315	004640747	S	3048	CATCTGGGCATAGCAGATACCTTGAGTGCTGGGGTCTCCTGGGGTTCAGG										
Mus musculus	MEEBO	ILMN_186330	ILMN_186330	POGZ	scl22900.19_473				27369993	NM_172683	Pogz		ILMN_2434612	005390202	S	20	ACTCTGAATGTGAGGCTACGAGTGTAGGCGTAGGGTCTGAGCACCACCAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186330	ILMN_186330	POGZ	scl22900.19_473				27369993	NM_172683	Pogz		ILMN_1231788	000240154	S	19	TACTCTGAATGTGAGGCTACGAGTGTAGGCGTAGGGTCTGAGCACCACCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197034	ILMN_197034	LOC380774	XM_354685.1	XM_354685.1			38073594	XM_354685.1	LOC380774		ILMN_1233284	003130575	S	736	GAGGAGTTCCACCAGGAGAAGAGAGTGCCAAAAACACAGCATAGTAGGCG										
Mus musculus	MEEBO	ILMN_193560	ILMN_193560	5430401O09RIK	scl34314.28_61				31342397	NM_176923	5430401O09Rik		ILMN_2498312	007150450	S	10	CTCATGAATGGATTAGGAAATCAGTCTCGTAGATAAAAACCAACACTTTC										
Mus musculus	RefSeq	ILMN_216128	ILMN_216128	RHOX6	NM_008955.1	NM_008955.1		19202	6679512	NM_008955.1	Rhox6	NP_032981.1	ILMN_1250192	000940288	S	768	GCCAGATGAGGATGGCTTCTTCTGAGCCACCCATGATGGCCATGACAACC	X	+	35182937-35182986	XqA3.3	Mus musculus reproductive homeobox 6 (Rhox6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	AW548842; Psx1; AV213605	AW548842; Psx1; AV213605
Mus musculus	RefSeq	ILMN_193704	ILMN_229954	1110067D22RIK	NM_173752.3	NM_173752.3		216551	146149221	NM_173752.3	1110067D22Rik	NP_776113.1	ILMN_1222356	006290762	S	2990	CTACCATGTTAACAGATGACTTCTACTTCCTGGGCAATCCCAGAATTGTC				11qA3.1	Mus musculus RIKEN cDNA 1110067D22 gene (1110067D22Rik), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	RP23-455B19.1; A530071M23	RP23-455B19.1; A530071M23
Mus musculus	Riken	ILMN_202090	ILMN_202090	TPTF-PENDING	ri|2700031G06|ZX00063M11|AK012307|1539					AK012307	Tptf-pending		ILMN_1229403	007320440	S	1131	GCCACAGATTCCTGATGTTAGACACCTGAGACCTAAAAGAGGACAGAAGC										
Mus musculus	RefSeq	ILMN_260480	ILMN_260480	OLFR1162	NM_001011835.1	NM_001011835.1		258105	58801433	NM_001011835.1	Olfr1162	NP_001011835.1	ILMN_3162441	005870528	S	809	GGCAAGTCGTTAAAGTGGCCTCTGTCTTTTACACTGTTGTCAACCCCATG	2	-	87889921-87889970	2qD	Mus musculus olfactory receptor 1162 (Olfr1162), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR174-14	MOR174-14
Mus musculus	RefSeq	ILMN_216575	ILMN_216575	ARTN	NM_009711.3	NM_009711.3		11876	141803588	NM_009711.3	Artn	NP_033841.1	ILMN_2672725	002970632	S	887	CAGCTACCGCTGCTGAGTTGACTCTAGCTACTCCAACCTCCTGGGTCGCT	4	-	117600423-117600472	4qD2.1	Mus musculus artemin (Artn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; A growth factor that binds to glial cell line-derived neurotrophic factor receptors [goid 30116] [evidence ISA]; A growth factor that binds to glial cell line-derived neurotrophic factor receptors [goid 30116] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]	neublastin	neublastin
Mus musculus	RefSeq	ILMN_216575	ILMN_216575	ARTN	NM_009711.3	NM_009711.3		11876	141803588	NM_009711.3	Artn	NP_033841.1	ILMN_1254114	004010075	S	1898	CGGCATGACAGACAGAGTGAAAGATGTCGGAACCACTGACCAACAGTCCC	4	-	117598996-117599045	4qD2.1	Mus musculus artemin (Artn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; A growth factor that binds to glial cell line-derived neurotrophic factor receptors [goid 30116] [evidence ISA]; A growth factor that binds to glial cell line-derived neurotrophic factor receptors [goid 30116] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]	neublastin	neublastin
Mus musculus	RefSeq	ILMN_216575	ILMN_216575	ARTN	NM_009711.3	NM_009711.3		11876	141803588	NM_009711.3	Artn	NP_033841.1	ILMN_1223072	006180086	S	500	AAGAGGCGCTGCCAGGTGCACAACTCTGGGCATGATCCACTTGAGCTTCG	4	-	117601686-117601735	4qD2.1	Mus musculus artemin (Artn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; A growth factor that binds to glial cell line-derived neurotrophic factor receptors [goid 30116] [evidence ISA]; A growth factor that binds to glial cell line-derived neurotrophic factor receptors [goid 30116] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]	neublastin	neublastin
Mus musculus	MEEBO	ILMN_221515	ILMN_221515	5730590C14RIK	scl0077097.1_81	NM_181071.2			31341105	NM_181071.2	5730590C14Rik		ILMN_2736593	001710300	S	2030	CCCCCATGTAAGGCGTATGATAAGAAGCCACCGGTAGAACATCTGTCGGA										
Mus musculus	RefSeq	ILMN_199497	ILMN_199497	LOC383577	XM_357132.1	XM_357132.1			38073512	XM_357132.1	LOC383577		ILMN_1242844	007380128	S	731	TGCAGGGAAAAGTGAGAAAGAGCCAGCAGCACACAGGAAGGGGAAGCAGC										
Mus musculus	RefSeq	ILMN_203945	ILMN_235515	ANKRD11	XM_925044.2	XM_925044.2		77087	94384368	XM_925044.2	Ankrd11	XP_930137.1	ILMN_1222223	005870348	S	409	GGACTTGTCTTCCTTTCCAGTCAAGAAACCCTCTGCAGGAATGGGCTGGC				8qE1	PREDICTED: Mus musculus ankyrin repeat domain 11, transcript variant 13 (Ankrd11), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197886	ILMN_229837	LOC665095	XM_974565.1	XM_974565.1		665095	94372134	XM_974565.1	LOC665095	XP_979659.1	ILMN_1238643	003990465	S	1329	CTCAGTGGGAAAGAGAGGTTGCCCTGGAGAACAACTAGCAAGATCTGAAC	4	-	96111420-96111462:96113911-96113917	4qC5	PREDICTED: Mus musculus similar to cytochrome P450, family 2, subfamily j, polypeptide 11 (LOC665095), mRNA.					
Mus musculus	RefSeq	ILMN_224599	ILMN_224599	FUSIP1	NM_001080387.1	NM_001080387.1		14105	122937371	NM_001080387.1	Fusip1	NP_001073856.1	ILMN_3090825	006290546	A	1	GAGAAGAGGCAGTTGCCGTAGCGGAGCCCTCTGGGTCTGTGCGAGTGTGG	4	+	135412007-135412056	4qD3	Mus musculus FUS interacting protein (serine-arginine rich) 1 (Fusip1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence NAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism [goid 48025] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, or within the cytoplasm of a cell [goid 16482] [evidence IDA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IC ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence NAS]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence NAS]	NSSR2; Nssr; SRrp40; TASR; FUSIP2; NSSR1; TASR2; TASR1	NSSR2; Nssr; SRrp40; TASR; FUSIP2; NSSR1; TASR2; TASR1
Mus musculus	RefSeq	ILMN_224599	ILMN_224599	FUSIP1	NM_001080387.1	NM_001080387.1		14105	122937371	NM_001080387.1	Fusip1	NP_001073856.1	ILMN_3019002	006650561	I	1472	CTGGGGATTGATGCCAACTGGGTTAAATAGCGTTTTCAGGGAGAGTGCCC	4	+	135420489-135420538	4qD3	Mus musculus FUS interacting protein (serine-arginine rich) 1 (Fusip1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence NAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism [goid 48025] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, or within the cytoplasm of a cell [goid 16482] [evidence IDA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IC ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence NAS]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence NAS]	NSSR2; Nssr; SRrp40; TASR; FUSIP2; NSSR1; TASR2; TASR1	NSSR2; Nssr; SRrp40; TASR; FUSIP2; NSSR1; TASR2; TASR1
Mus musculus	RefSeq	ILMN_207155	ILMN_232736	PXN	NM_011223.2	NM_011223.2		19303	114326500	NM_011223.2	Pxn	NP_035353.1	ILMN_2585456	002470681	S	556	CATGACGGTAGGTGAGGGCTCTGCCGACTTCTGCTTGTTGGGGAAGCTGT	5	+	115995426-115995475	5qF	Mus musculus paxillin (Pxn), transcript variant alpha, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence TAS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]	Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with the BH4 domain of a protein of the Bcl-2 family. All anti-apoptotic proteins contain BH1 and BH2 domains; some also contain an additional N-terminal BH4 domain, which is almost never seen in pro-apoptotic proteins. Loss of the BH4 domain can diminish or abrogate anti-apoptotic function or even impart outright death-promoting properties to the protein [goid 51435] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW123232; AW108311	AW123232; AW108311
Mus musculus	RefSeq	ILMN_189327	ILMN_232736	PXN	NM_011223.2	NM_011223.2		19303	114326500	NM_011223.2	Pxn	NP_035353.1	ILMN_1225102	005310201	S	1952	ACTCCGGGTCGGTCCTGCCTGTCTCTCGTCCCTACCACCTGCTAAAGGGG	5	+	116004268-116004317	5qF	Mus musculus paxillin (Pxn), transcript variant alpha, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence TAS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]	Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with the BH4 domain of a protein of the Bcl-2 family. All anti-apoptotic proteins contain BH1 and BH2 domains; some also contain an additional N-terminal BH4 domain, which is almost never seen in pro-apoptotic proteins. Loss of the BH4 domain can diminish or abrogate anti-apoptotic function or even impart outright death-promoting properties to the protein [goid 51435] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW123232; AW108311	AW123232; AW108311
Mus musculus	RefSeq	ILMN_209664	ILMN_209664	CDKN1A	NM_007669.3	NM_007669.3		12575	142368234	NM_007669.3	Cdkn1a	NP_031695.1	ILMN_2634083	003130630	S	1734	CATCCTGGTCTGGACTGTCTACCCTTAGCCCGCACCCCAAGAACATGTAT	17	+	29237494-29237543	17qA3.3	Mus musculus cyclin-dependent kinase inhibitor 1A (P21) (Cdkn1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of non-apoptotic programmed cell death, cell death resulting from activation of endogenous cellular processes, by a mechanism other than apoptosis [goid 43071] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with cyclins, proteins whose levels in a cell varies markedly during the cell cycle, rising steadily until mitosis, then falling abruptly to zero. As cyclins reach a threshold level, they are thought to drive cells into G2 phase and thus to mitosis [goid 30332] [evidence IPI]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mda6; p21Cip1; P21; Cdkn1; p21WAF; Waf1; SDI1; CIP1; CDKI; CAP20	mda6; p21Cip1; P21; Cdkn1; p21WAF; Waf1; SDI1; CIP1; CDKI; CAP20
Mus musculus	RefSeq	ILMN_186899	ILMN_246482	RNF38	NM_001038993.2	NM_001038993.2		73469	142363897	NM_001038993.2	Rnf38	NP_001034082.1	ILMN_2676434	004760564	S	1488	GTGATTTTGAGTCAAGGCAGCTTCTTAGAGTCTTACCTTGTAACCACGAG	4	-	44144448-44144497	4qB1	Mus musculus ring finger protein 38 (Rnf38), transcript variant 2, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Oip1; AA673263; 2610202O07Rik; 1700065B19Rik	Oip1; AA673263; 2610202O07Rik; 1700065B19Rik
Mus musculus	RefSeq	ILMN_186899	ILMN_246482	RNF38	NM_001038993.2	NM_001038993.2		73469	142363897	NM_001038993.2	Rnf38	NP_001034082.1	ILMN_2703286	000010458	S	2258	GATTGCTAAGGGTGCATCCATTCTAAGCATTGAATACTCCATCCCCTTCC	4	-	44141791-44141840	4qB1	Mus musculus ring finger protein 38 (Rnf38), transcript variant 2, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Oip1; AA673263; 2610202O07Rik; 1700065B19Rik	Oip1; AA673263; 2610202O07Rik; 1700065B19Rik
Mus musculus	RefSeq	ILMN_186899	ILMN_246482	RNF38	NM_001038993.2	NM_001038993.2		73469	142363897	NM_001038993.2	Rnf38	NP_001034082.1	ILMN_2698423	001190039	S	129	CTGGCCATCCTAACAAGGTGATTTGTGAAAGGGTGAGACTTCAGAGCCTG	4	-	44171843-44171892	4qB1	Mus musculus ring finger protein 38 (Rnf38), transcript variant 2, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Oip1; AA673263; 2610202O07Rik; 1700065B19Rik	Oip1; AA673263; 2610202O07Rik; 1700065B19Rik
Mus musculus	RefSeq	ILMN_220428	ILMN_220428	KRTAP9-3	NM_029351.2	NM_029351.2		75586	124378018	NM_029351.2	Krtap9-3	NP_083627.2	ILMN_1235009	006590279	S	567	CACGGCTACATAATTTCCCAGGAGGTAAATTCATTTGGGGTGGAAGAGCC	11	-	99458804-99458853	11qD	Mus musculus keratin associated protein 9-3 (Krtap9-3), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	MEEBO	ILMN_221175	ILMN_221175	6330405H19	scl27465.5_88	XM_358637.1			38080358	XM_358637.1	6330405H19		ILMN_2731908	005420392	S	728	GCTCAGCGTTTCCCCACACCAGGTCCGTGTGCTAAAGGTTTTATTACAGT										
Mus musculus	RefSeq	ILMN_220801	ILMN_241246	CYPT8	NM_001039941.2	NM_001039941.2		664723	142363362	NM_001039941.2	Cypt8	NP_001035030.1	ILMN_2727114	000620609	S	329	GGGAGCAATCACTTCAAAGAAGAATTAGGAGACAATTGACGCGGAGCCAA					Mus musculus cysteine-rich perinuclear theca 8 (Cypt8), mRNA.					
Mus musculus	RefSeq	ILMN_214757	ILMN_214757	PLAGL1	NM_009538.1	NM_009538.1		22634	7110736	NM_009538.1	Plagl1	NP_033564.1	ILMN_2886742	002000575	S	2493	AGAAGCCCAAATAGCAGGACTCGTCTATAAGAAATGGACAGTTTAGTTCC	10	+	12848786-12848802:12849432-12849461:12849462-12849464	10qA2	Mus musculus pleiomorphic adenoma gene-like 1 (Plagl1), mRNA.		Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]	Zac1; Lot1	Zac1; Lot1
Mus musculus	RefSeq	ILMN_214757	ILMN_214757	PLAGL1	NM_009538.1	NM_009538.1		22634	7110736	NM_009538.1	Plagl1	NP_033564.1	ILMN_1252582	004280546	S	604	TATTCCCACTCCAGGGAGCGCCCATTCAAGTGCTCGAAGGCTGAGTGTGG	10	+	12844891-12844940	10qA2	Mus musculus pleiomorphic adenoma gene-like 1 (Plagl1), mRNA.		Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]	Zac1; Lot1	Zac1; Lot1
Mus musculus	RefSeq	ILMN_214757	ILMN_214757	PLAGL1	NM_009538.1	NM_009538.1		22634	7110736	NM_009538.1	Plagl1	NP_033564.1	ILMN_1240034	000990703	S	2693	CGACTTCATTTATCTTAAAGACAAAACTGGTTGTCAGTCATATCTGACAG	10	+	12849615-12849664	10qA2	Mus musculus pleiomorphic adenoma gene-like 1 (Plagl1), mRNA.		Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]	Zac1; Lot1	Zac1; Lot1
Mus musculus	RefSeq	ILMN_201387	ILMN_244195	LOC673458	XM_001005634.1	XM_001005634.1		673458	94421410	XM_001005634.1	LOC673458	XP_001005634.1	ILMN_1225017	006760324	S	13	AAGTGGCACCTTGGCCTGAACTGCGAGACGGCGTCCGACCTCTGCCACCA					PREDICTED: Mus musculus similar to arylsulfatase E precursor (LOC673458), mRNA.					
Mus musculus	RefSeq	ILMN_221664	ILMN_256179	ANUBL1	NM_001081317.1	NM_001081317.1		67492	124486776	NM_001081317.1	Anubl1	NP_001074786.1	ILMN_2738707	001110315	S	2461	CTGCATTATTTTTGTTCGACTCCAAAAGATTTGCCAAATAACAAGCGCAC	6	+	116279570-116279619	6qE3	Mus musculus AN1, ubiquitin-like, homolog (Xenopus laevis) (Anubl1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810002D23Rik	2810002D23Rik
Mus musculus	MEEBO	ILMN_195811	ILMN_195811	1700022P15RIK	scl31606.2.1_49						1700022P15Rik		ILMN_1255167	007330468	S	1	CTTTGGAAGGGTTAAAGCCTCGGATCCCACTCTCAGCTCAGCTCCCCACC										
Mus musculus	RefSeq	ILMN_215302	ILMN_215302	RHBDF1	NM_010117.1	NM_010117.1		13650	32306546	NM_010117.1	Rhbdf1	NP_034247.1	ILMN_2657828	003840598	S	2709	AACAGATGGGTGCTTCCTGGACACTGACCTCTTGTGCCTTGCTCGCTCCG	11	-	32113123-32113159:32113052-32113064	11qA4	Mus musculus rhomboid family 1 (Drosophila) (Rhbdf1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C16ORF8; KIAA4242; mKIAA4242; Dist1; Egfr-rs	C16ORF8; KIAA4242; mKIAA4242; Dist1; Egfr-rs
Mus musculus	RefSeq	ILMN_194465	ILMN_246062	PSPC1	NM_025682.2	NM_025682.2		66645	142366164	NM_025682.2	Pspc1	NP_079958.2	ILMN_1238688	001450064	S	2219	GGCATGGGGGTTAAGATTGTATAAACCATAGATCCTGTGTAAGTTAGAGT	14	-	57341392-57341441	14qC3	Mus musculus paraspeckle protein 1 (Pspc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5730470C09Rik; AI449052; AI327109	5730470C09Rik; AI449052; AI327109
Mus musculus	RefSeq	ILMN_236378	ILMN_236378	WDR37	NM_001039388.1	NM_001039388.1		207615	86476058	NM_001039388.1	Wdr37	NP_001034477.1	ILMN_3047987	001170719	I	194	CAGATGGACTTAAAACCTGCCTGACCGTGGACCCCTCACCGGAATCCCTG	13	-	8870733-8870782	13qA1	Mus musculus WD repeat domain 37 (Wdr37), transcript variant 2, mRNA.				4933417A01Rik; mKIAA0982; AI481191; 3110035P10Rik; 6430603N07	4933417A01Rik; mKIAA0982; AI481191; 3110035P10Rik; 6430603N07
Mus musculus	RefSeq	ILMN_236378	ILMN_236378	WDR37	NM_001039388.1	NM_001039388.1		207615	86476058	NM_001039388.1	Wdr37	NP_001034477.1	ILMN_3123826	006400131	A	558	AGCTGGTGAAGGACAAGCGATCGATGGGGCAGAATTGAGTAAGGGCCAAC	13	-	8853257-8853306	13qA1	Mus musculus WD repeat domain 37 (Wdr37), transcript variant 2, mRNA.				4933417A01Rik; mKIAA0982; AI481191; 3110035P10Rik; 6430603N07	4933417A01Rik; mKIAA0982; AI481191; 3110035P10Rik; 6430603N07
Mus musculus	Riken	ILMN_202840	ILMN_202840	6720486H14RIK	ri|6720486H14|PX00060K10|AK032990|1965					AK032990	6720486H14Rik		ILMN_1232302	002970400	S	1588	CGAGGTGAAGCTGGACGGAGGAGGAAGAGGTCAGGTCCATAGTGCTTTTC										
Mus musculus	RefSeq	ILMN_200117	ILMN_231623	LOC384221	XM_911331.1	XM_911331.1		384221	82898430	XM_911331.1	LOC384221	XP_916424.1	ILMN_1238771	002750593	S	2388	CAGTACCAGGGGAAAGGCCATGGTAGTTGTGGAGGTCTTCTCCATCTTGG				5qF	PREDICTED: Mus musculus similar to vomeronasal 2, receptor, 1 (LOC384221), mRNA.					
Mus musculus	MEEBO	ILMN_195154	ILMN_195154	A230052G17RIK	scl37664.1.20_13						A230052G17Rik		ILMN_2513067	005340309	S	7	CATGTATGTGACAGATTAAGAATGGAAAATGGATGGTTTCTTAAGTTGAG										
Mus musculus	RefSeq	ILMN_223911	ILMN_239772	0610007P14RIK	NM_021446.2	NM_021446.2		58520	133892239	NM_021446.2	0610007P14Rik	NP_067421.1	ILMN_2773981	004490064	S	964	GGGCAAGGGCTGCTTCAAGGTCCTGAGCACATAGACTGGGCTCCTTTCTA	12	-	87156576-87156625	12qD2	Mus musculus RIKEN cDNA 0610007P14 gene (0610007P14Rik), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]		AU019315; C77855; 1190004E09Rik; ORF11	AU019315; C77855; 1190004E09Rik; ORF11
Mus musculus	RefSeq	ILMN_223911	ILMN_239772	0610007P14RIK	NM_021446.2	NM_021446.2		58520	133892239	NM_021446.2	0610007P14Rik	NP_067421.1	ILMN_2771349	004150367	S	8	GGAGCTGGCCTAGGGAGAGCTGGTTTGCGGATGCTGCTGATACTGCTGCA	12	-	87165438-87165487	12qD2	Mus musculus RIKEN cDNA 0610007P14 gene (0610007P14Rik), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]		AU019315; C77855; 1190004E09Rik; ORF11	AU019315; C77855; 1190004E09Rik; ORF11
Mus musculus	Riken	ILMN_206064	ILMN_206064	D330008I21RIK	ri|D330008I21|PX00190P09|AK052205|3018					AK052205	D330008I21Rik		ILMN_1236811	004920196	S	2645	GCCTTGTTGGTTGGAGTAGGTGTGGCCTTGTTGGAGCAAGTGGGTCACTG										
Mus musculus	RefSeq	ILMN_209302	ILMN_209302	GTF2A1L	NM_023630.1	NM_023630.1		71828	12963758	NM_023630.1	Gtf2a1l	NP_076119.1	ILMN_2594502	002230392	S	1521	CTCCATCAAAGAATTGATTAACTTTTTGTTCACTATATGGAATTAAATAA	17	+	89114437-89114486	17qE4	Mus musculus general transcription factor IIA, 1-like (Gtf2a1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12) [goid 5672] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	1700011N16Rik; Alf	1700011N16Rik; Alf
Mus musculus	RefSeq	ILMN_221014	ILMN_246619	6530409C15RIK	XM_994638.1	XM_994638.1		76224	94377088	XM_994638.1	6530409C15Rik	XP_999732.1	ILMN_2729926	006350273	S	1352	GCCGACAGTCTTTCCGACTTCCACAGGTCTGAAATGGGTTTATTTGCTGA	6	+	28168681-28168730	6qA3.2	PREDICTED: Mus musculus RIKEN cDNA 6530409C15 gene (6530409C15Rik), mRNA.					
Mus musculus	MEEBO	ILMN_208940	ILMN_208940	ACSL4	scl0050790.1_147	NM_207625.1			46518527	NM_207625.1	Acsl4		ILMN_2690135	006290100	S	2330	CTCAAAGACATTGAGCGAATGTATGGGGGCAAATAAAATGCGGCTCTCTG						A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence ISA]		
Mus musculus	RefSeq	ILMN_208950	ILMN_208950	PTPN12	NM_011203.2	NM_011203.2		19248	34328194	NM_011203.2	Ptpn12	NP_035333.2	ILMN_2783403	000540288	S	2861	GCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGATCAAAGATTGTA	5	-	20492718-20492767	5qA3	Mus musculus protein tyrosine phosphatase, non-receptor type 12 (Ptpn12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	P19-PTP; PTP-P19; PTPG1; PTP-PEST	P19-PTP; PTP-P19; PTPG1; PTP-PEST
Mus musculus	RefSeq	ILMN_208950	ILMN_208950	PTPN12	NM_011203.2	NM_011203.2		19248	34328194	NM_011203.2	Ptpn12	NP_035333.2	ILMN_2759943	005900692	S	359	GTGGCAACCCAAGGGCCTTTGGCGAATACAGTCATAGACTTCTGGAGGAT	5	-	20525053-20525102	5qA3	Mus musculus protein tyrosine phosphatase, non-receptor type 12 (Ptpn12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	P19-PTP; PTP-P19; PTPG1; PTP-PEST	P19-PTP; PTP-P19; PTPG1; PTP-PEST
Mus musculus	RefSeq	ILMN_208950	ILMN_208950	PTPN12	NM_011203.2	NM_011203.2		19248	34328194	NM_011203.2	Ptpn12	NP_035333.2	ILMN_2759945	000870328	S	362	GGCAACCCAAGGGCCTTTGGCGAATACAGTCATAGACTTCTGGAGGATGA	5	-	20525050-20525099	5qA3	Mus musculus protein tyrosine phosphatase, non-receptor type 12 (Ptpn12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	P19-PTP; PTP-P19; PTPG1; PTP-PEST	P19-PTP; PTP-P19; PTPG1; PTP-PEST
Mus musculus	RefSeq	ILMN_208950	ILMN_208950	PTPN12	NM_011203.2	NM_011203.2		19248	34328194	NM_011203.2	Ptpn12	NP_035333.2	ILMN_2759944	001050446	S	360	TGGCAACCCAAGGGCCTTTGGCGAATACAGTCATAGACTTCTGGAGGATG	5	-	20525052-20525101	5qA3	Mus musculus protein tyrosine phosphatase, non-receptor type 12 (Ptpn12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	P19-PTP; PTP-P19; PTPG1; PTP-PEST	P19-PTP; PTP-P19; PTPG1; PTP-PEST
Mus musculus	RefSeq	ILMN_208950	ILMN_208950	PTPN12	NM_011203.2	NM_011203.2		19248	34328194	NM_011203.2	Ptpn12	NP_035333.2	ILMN_2651197	002000292	S	477	TGTGAGCGCTACTGGCCTTTGTATGGAGAAGATCCTATAACATTTGCACC	5	-	20520527-20520576	5qA3	Mus musculus protein tyrosine phosphatase, non-receptor type 12 (Ptpn12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	P19-PTP; PTP-P19; PTPG1; PTP-PEST	P19-PTP; PTP-P19; PTPG1; PTP-PEST
Mus musculus	RefSeq	ILMN_213036	ILMN_213036	SLC46A1	NM_026740.1	NM_026740.1		52466	26892297	NM_026740.1	Slc46a1	NP_081016.1	ILMN_2909275	000540475	S	1577	GAGAGGGAGTTCAAGCCAGTTATGAGCAACACCTACTCTCTGACTGAGCC	11	+	78280000-78280049	11qB5	Mus musculus solute carrier family 46, member 1 (Slc46a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, into, out of, within or between cells [goid 15886] [evidence IDA]	Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, into, out of, within or between cells [goid 15232] [evidence IDA]	D11Ertd18e; mFLJ00234; HCP1; 1110002C08Rik; RP23-399H5.1; FLJ00234	D11Ertd18e; mFLJ00234; HCP1; 1110002C08Rik; RP23-399H5.1; FLJ00234
Mus musculus	Riken	ILMN_201663	ILMN_201663	PPARBP	ri|1500011F08|R000020M18|AK005207|1371					AK005207	Pparbp		ILMN_1222371	003140673	S	826	ACCCCGCGGAGTGGGGGTTTGTGACTATACTGTACCTGTCTTCAGACACC										
Mus musculus	RefSeq	ILMN_206867	ILMN_249200	EG665075	XM_979977.1	XM_979977.1		665075	94396669	XM_979977.1	EG665075	XP_985071.1	ILMN_1256802	000670022	S	490	GCGGCATTCAGGATCATGTGGGAGAATCTGGGAGACCTGGCATTCACAGC				14qA3	PREDICTED: Mus musculus predicted gene, EG665075 (EG665075), mRNA.					
Mus musculus	Riken	ILMN_203477	ILMN_203477	6430531D06RIK	ri|6430531D06|PX00046D24|AK032385|3341					AK032385	6430531D06Rik		ILMN_1249619	007650082	S	2869	GAGTTGGGTTTGTTGAGTAGATCTGTGCCCTCAGTGAATGTTGTCTGGGC										
Mus musculus	RefSeq	ILMN_212543	ILMN_212543	NMU	NM_019515.1	NM_019515.1		56183	9506926	NM_019515.1	Nmu	NP_062388.1	ILMN_1240160	007040397	S	724	CTCTCTTGCAAACCCCTGTATTGTAACATTCTCTGCGATGGTTGAGATTA	5	-	76762563-76762612	5qC3.3	Mus musculus neuromedin U (Nmu), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence ISO]	Interacting selectively with one or more specific sites on a neuromedin U receptor [goid 42922] [evidence ISO]		
Mus musculus	RefSeq	ILMN_212159	ILMN_212159	GPR149	NM_177346.4	NM_177346.4		229357	146198723	NM_177346.4	Gpr149	NP_796320.2	ILMN_3162332	007560241	S	3093	GGCTGCTTTTTACTGCAAAAGAGAAAAGAGATGTTCTGGCCATAGGGGGG				3qE1	Mus musculus G protein-coupled receptor 149 (Gpr149), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	PGR10; 9630018L10Rik	PGR10; 9630018L10Rik
Mus musculus	MEEBO	ILMN_215095	ILMN_215095	4930519L02RIK	scl22511.3.1_164	XM_131210.1			20878620	XM_131210.1	4930519L02Rik		ILMN_1225132	007200148	S	532	GGGATGCTTCATCGGCCAAGTTTCTATCTCTGTACTAGGCAACCATTACA										
Mus musculus	RefSeq	ILMN_201367	ILMN_201367	LOC382555	XM_356566.1	XM_356566.1			38092642	XM_356566.1	LOC382555		ILMN_2542048	001440326	S	228	CTCAGAGTTCTCCAAGAAGTGTTCAGAAAGGTGGAAGGCCATGTCTGCTA										
Mus musculus	RefSeq	ILMN_200279	ILMN_200279	LOC386124	XM_359080.1	XM_359080.1			38081206	XM_359080.1	LOC386124		ILMN_2538208	003780528	S	168	GGACTTTAATAAATCACTTAAAGAAATACAGGAGAACACTGCTAAAGAGT										
Mus musculus	RefSeq	ILMN_217451	ILMN_217451	ATP6V1G3	NM_177397.3	NM_177397.3		338375	118130425	NM_177397.3	Atp6v1g3	NP_796371.1	ILMN_2683356	003460593	S	1395	AAGTTCCCTCCCAGGAAGCTTTCTAAATACCCACTGCTGAGCACTAGCAG	1	+	140185547-140185596	1qE4	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit G3 (Atp6v1g3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IC ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence IC ]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	MGC130213; MGC130214	MGC130213; MGC130214
Mus musculus	MEEBO	ILMN_215333	ILMN_215333	PPARBP	scl0001273.1_3109	NM_013634.1			7305400	NM_013634.1	Pparbp		ILMN_2658227	002900121	S	4834	GAAACTAATGATATATGTAAACCAACCCGAGGGGTGAGTCAGACAGGCCC										
Mus musculus	Riken	ILMN_204848	ILMN_204848	SLC7A11	ri|A130046A05|PX00123D12|AK037742|1906					AK037742	Slc7a11		ILMN_2568074	006760079	S	1562	TGAAGTAACTGAAAGATGTTGTAGGAACTTGTAAATTTGGGAGCTTGGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214808	ILMN_214808	MAST2	NM_008641.2	NM_008641.2		17776	112363077	NM_008641.2	Mast2	NP_032667.2	ILMN_2652181	003140291	S	5591	GGGGGCCAGCAAGATCATCAGGACTTAGCACTGACATCAGATGAGCTCTT	4	-	115979432-115979481	4qD1	Mus musculus microtubule associated serine/threonine kinase 2 (Mast2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a spermatid cell [goid 48515] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45075] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]	mKIAA0807; Mtssk; MAST205	mKIAA0807; Mtssk; MAST205
Mus musculus	RefSeq	ILMN_214808	ILMN_214808	MAST2	NM_008641.2	NM_008641.2		17776	112363077	NM_008641.2	Mast2	NP_032667.2	ILMN_3125920	006400537	A	5541	CCCTGAGCCCAGAAACCCGGCCCAGCCTGCTCTGGAAAAGCCAAGAACTT	4	-	115979482-115979531	4qD1	Mus musculus microtubule associated serine/threonine kinase 2 (Mast2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a spermatid cell [goid 48515] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45075] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]	mKIAA0807; Mtssk; MAST205	mKIAA0807; Mtssk; MAST205
Mus musculus	RefSeq	ILMN_222717	ILMN_239103	9030404E10RIK	XM_985879.1	XM_985879.1		71528	94400132	XM_985879.1	9030404E10Rik	XP_990973.1	ILMN_1258282	003450608	S	324	GGAGGTCCTATGCATCTGGAAACCAAGGCTGTGAGGATTGACGCGCCTGG	16	-	30026449-30026458:30026459-30026498	16qB2	PREDICTED: Mus musculus RIKEN cDNA 9030404E10 gene (9030404E10Rik), mRNA.					
Mus musculus	Riken	ILMN_202225	ILMN_202225	MOR, GPCR	ri|4930430C20|PX00030J23|AK015248|686					AK015248	MOR, GPCR		ILMN_2547950	007160703	S	617	CCCAACACTGTTGTGGATTTTCTGCTCAGAGACAACACCATGATATATAC										
Mus musculus	MEEBO	ILMN_187022	ILMN_187022	ARNT	scl22882.20_49				6806900	NM_009709	Arnt		ILMN_1255317	000730356	S	12	GCAGATGCAGGTAACTGCTTTTACCCTTTACCGTCCTCAGGTGAGTCTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]		
Mus musculus	MEEBO	ILMN_213553	ILMN_213553	OLFR635	scl00259122.1_264				22128748	NM_147118	Olfr635		ILMN_2704500	002480561	S	645	GTATTGGACCCTCTGCTCATTGTACTCTCCTATGCACTTATCCTGAAGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	Riken	ILMN_203206	ILMN_203206	B230213E18RIK	ri|B230213E18|PX00069D20|AK045580|1641					AK045580	B230213E18Rik		ILMN_1240505	002000706	S	1577	CGTAAGAGCCGTGGTGGTGAGTTAGAAAAAAATCATGTTGCACGTGACCC										
Mus musculus	RefSeq	ILMN_189096	ILMN_189096	TRH	NM_009426.2	NM_009426.2		22044	134031936	NM_009426.2	Trh	NP_033452.2	ILMN_1237934	006660132	S	1223	GCCCCATATGGCAAGACTGACCTGGTATAACTTCAGCGCATCCTCCAAGG	6	-	92192164-92192213	6qD1	Mus musculus thyrotropin releasing hormone (Trh), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 8437] [evidence ISA]	AL022609; AI324969	AL022609; AI324969
Mus musculus	Riken	ILMN_207287	ILMN_207287	ADPRT2	ri|3830425K23|PX00636H21|AK076193|864					AK076193	Adprt2		ILMN_2586462	000150431	S	740	TGGCTCGTTACTACTGGAGAGCTACACTCAGGGTTTAGGGCAAGGAACCC										
Mus musculus	RefSeq	ILMN_221423	ILMN_221423	LRTM2	NM_172492.2	NM_172492.2		211187	40254213	NM_172492.2	Lrtm2	NP_766080.1	ILMN_2735391	001300609	S	3886	TGAGACAGAAGATTTTTAAAGGCAAAATTATATTTCTGGTTTGTCGTTTC	6	-	119265183-119265232	6qF1	Mus musculus leucine-rich repeats and transmembrane domains 2 (Lrtm2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A230084J22; AI841794	A230084J22; AI841794
Mus musculus	RefSeq	ILMN_200131	ILMN_200131	LOC385791	XM_358946.1	XM_358946.1			38080565	XM_358946.1	LOC385791		ILMN_1216393	005560037	S	238	GCTGCAGCCAGCAACTATTTCAGGTCAGTCTGCTTTGAATACCGAGTCAA										
Mus musculus	RefSeq	ILMN_221151	ILMN_221151	CD209B	NM_026972.2	NM_026972.2		69165	83699397	NM_026972.2	Cd209b	NP_081248.2	ILMN_3078388	002470307	I	1576	GCTTTCAGGTTTCTCTGGGCTTAGGGCTCACTGTTGTCCCCCCACTTCAG	8	-	3918051-3918100	8qA1.1	Mus musculus CD209b antigen (Cd209b), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [evidence IDA]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]; The series of events in which a stimulus from a yeast is received and converted into a molecular signal [goid 1879] [evidence IDA]	Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any polysaccharide [goid 30247] [evidence IDA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]; Interacting selectively with zymosan [goid 1872] [evidence IDA]	SIGNR1; 1810030I22Rik; mSIGNR1; OtB7	SIGNR1; 1810030I22Rik; mSIGNR1; OtB7
Mus musculus	RefSeq	ILMN_221151	ILMN_221151	CD209B	NM_026972.2	NM_026972.2		69165	83699397	NM_026972.2	Cd209b	NP_081248.2	ILMN_3157658	005090309	A	973	AGTCTGCAACCCCATGCACTGAAGGCTAGCTCATCTCCGCTCCTACCTTC	8	-	3918654-3918676:3918677-3918703	8qA1.1	Mus musculus CD209b antigen (Cd209b), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [evidence IDA]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]; The series of events in which a stimulus from a yeast is received and converted into a molecular signal [goid 1879] [evidence IDA]	Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any polysaccharide [goid 30247] [evidence IDA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]; Interacting selectively with zymosan [goid 1872] [evidence IDA]	SIGNR1; 1810030I22Rik; mSIGNR1; OtB7	SIGNR1; 1810030I22Rik; mSIGNR1; OtB7
Mus musculus	RefSeq	ILMN_214933	ILMN_214933	CD63	NM_007653.3	NM_007653.3		12512	110431342	NM_007653.3	Cd63	NP_031679.1	ILMN_3128907	005090053	A	815	AATGTAGGGGTGGGGGGCGTTTGGTCTTTTCATGGAGTGGATTCTCCAGG	10	+	128349790-128349796:128349797-128349839	10qD3	Mus musculus CD63 antigen (Cd63), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence ISO]			ME491; C75951; MGC103180; MGC107286; Tspan30	ME491; C75951; MGC103180; MGC107286; Tspan30
Mus musculus	RefSeq	ILMN_214933	ILMN_214933	CD63	NM_007653.3	NM_007653.3		12512	110431342	NM_007653.3	Cd63	NP_031679.1	ILMN_3052430	003140193	I	40	GAGACGGCGGCTGAGCCGCGGCAGGAGAGTACTGAGAAGCGTCGGGGAGC	10	+	128346961-128347010	10qD3	Mus musculus CD63 antigen (Cd63), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence ISO]			ME491; C75951; MGC103180; MGC107286; Tspan30	ME491; C75951; MGC103180; MGC107286; Tspan30
Mus musculus	RefSeq	ILMN_197692	ILMN_197692	LOC213544	XM_160224.2	XM_160224.2			38077425	XM_160224.2	LOC213544		ILMN_2529028	005890500	S	1030	CCATGGGTAGAATCTCTAGCTTGCTGGAGAGTGTTCTCACAAGCTACCAA										
Mus musculus	MEEBO	ILMN_192078	ILMN_192078	SCL0002255.1_1	scl0002255.1_1	AK017012.1			12856051	AK017012.1	scl0002255.1_1		ILMN_2484784	004890685	S	20	CCATCTTCCCTCTAATGCGCTGGTTGAAGAGCATCTACGTGACTATGCAC										
Mus musculus	MEEBO	ILMN_192569	ILMN_192569	PODXL2	scl0319655.1_154				31542456	NM_176973	Podxl2		ILMN_1244905	005270484	S	19	TGTTCTATGAGGACACTCACCTGTGATCGCCGGGCCACGGGCGCGATACT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_205722	ILMN_205722	9630009L01RIK	ri|9630009L01|PX00115M13|AK035840|3390					AK035840	9630009L01Rik		ILMN_1254153	006520477	S	3062	CCTTGGTGTGCTGGGGTGAGTGAGGTTCTGGACTCAGTGGAGGTAGGAAG										
Mus musculus	RefSeq	ILMN_197507	ILMN_197507	LOC380908	XM_358459.1	XM_358459.1			38076347	XM_358459.1	LOC380908		ILMN_2528373	004670612	S	698	TTGAGTTCCACTCCTTTATCCATTCACCTGGCAGTGGGCCTCATCATGCC										
Mus musculus	RefSeq	ILMN_201145	ILMN_201145	LOC385027	XM_358001.1	XM_358001.1			38089447	XM_358001.1	LOC385027		ILMN_1255900	002230689	S	252	GGTCCAGGCAGGACTTTGGCTTGGAGAAGGCCCTCACAATAGAGGAAGGC										
Mus musculus	RefSeq	ILMN_185839	ILMN_238610	PVT1	NR_003368.1	NR_003368.1		19296	126722733	NR_003368.1	Pvt1		ILMN_1237084	006270703	S	1006	GGTGATAGATCCAGCCATGATACTGACCCTAAGAGAATGAGACGCTCTGC	15	+	62074005-62074054	15qD1	Mus musculus plasmacytoma variant translocation 1 (Pvt1), non-coding RNA.				Mis-1; Gt(pU21)84Imeg; Mlvi-1; Pvt-1	Mis-1; Gt(pU21)84Imeg; Mlvi-1; Pvt-1
Mus musculus	RefSeq	ILMN_214110	ILMN_214110	CCL1	NM_011329.2	NM_011329.2		20290	142387472	NM_011329.2	Ccl1	NP_035459.1	ILMN_1255735	001190241	S	40	CTAGAGAGGCTTGAGACAGAAACTTATCACCATGAAACCCACTGCCATGG	11	-	81993227-81993246:81993247-81993276	11qC	Mus musculus chemokine (C-C motif) ligand 1 (Ccl1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Scya1; Tca-3; BF534335; I-309	Scya1; Tca-3; BF534335; I-309
Mus musculus	MEEBO	ILMN_192960	ILMN_192960	C730009D12	scl51859.1.3752_6						C730009D12		ILMN_2492944	005270379	S	17	TAACATGAACCTGGGCATGTTGGCAATGCAGACCGCGCAATTCCTTACCG										
Mus musculus	RefSeq	ILMN_199036	ILMN_199036	LOC211870	XM_137113.4	XM_137113.4			38090534	XM_137113.4	LOC211870		ILMN_1249762	000010020	S	642	CGGTGGCAATTTTGGACCAGGACCAGGACCAGGAAACAACTTACGGGGGG										
Mus musculus	RefSeq	ILMN_199233	ILMN_199233	LOC217240	XM_137878.4	XM_137878.4			38092060	XM_137878.4	LOC217240		ILMN_2534518	005340491	S	1585	ACAGTACCAAGGGAGGCAGATGGAGAGGAAGTGCTGCTGGAGGAGGACCT										
Mus musculus	Riken	ILMN_206896	ILMN_206896	UTRN	ri|E030042O06|PX00206N01|AK087303|2568					AK087303	Utrn		ILMN_1251617	003460022	S	2304	GGTCTCCGCAGCAAAGAAATAACTTACCCAGTTGTACCATCCCAGGCTGG						A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	The process whose specific outcome is the progression of the adult somatic muscle over time, from its formation to the mature structure [goid 7527] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_192686	ILMN_259475	PREI4	NM_001042672.1	NM_001042672.1		74182	111185946	NM_001042672.1	Prei4	NP_001036137.1	ILMN_1251682	001110538	S	732	AGGTCTCTCCCACTGTTCTTCACAAAATGTCCAACAGCCTGGAGATATCC	2	-	132376187-132376236	2qF2	Mus musculus preimplantation protein 4 (Prei4), transcript variant 4, mRNA.		The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	2310032D16Rik; mKIAA1434; AU015213; 2310004G06Rik	2310032D16Rik; mKIAA1434; AU015213; 2310004G06Rik
Mus musculus	RefSeq	ILMN_192068	ILMN_259475	PREI4	NM_001042672.1	NM_001042672.1		74182	111185946	NM_001042672.1	Prei4	NP_001036137.1	ILMN_2484679	003400328	S	446	GGTCCATGTCAAGTCATAGTTCACAAGTGGGAGACTCATCTACAACCACG	2	-	132384359-132384408	2qF2	Mus musculus preimplantation protein 4 (Prei4), transcript variant 4, mRNA.		The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	2310032D16Rik; mKIAA1434; AU015213; 2310004G06Rik	2310032D16Rik; mKIAA1434; AU015213; 2310004G06Rik
Mus musculus	RefSeq	ILMN_191957	ILMN_259475	PREI4	NM_001042672.1	NM_001042672.1		74182	111185946	NM_001042672.1	Prei4	NP_001036137.1	ILMN_2483718	001820132	S	3165	CTTCCTAGGAATTGGTATATAAGATGTAAGTTTAATAGCTGCTAATACTT	2	-	132358638-132358687	2qF2	Mus musculus preimplantation protein 4 (Prei4), transcript variant 4, mRNA.		The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	2310032D16Rik; mKIAA1434; AU015213; 2310004G06Rik	2310032D16Rik; mKIAA1434; AU015213; 2310004G06Rik
Mus musculus	RefSeq	ILMN_259430	ILMN_259430	AMPD1	NM_001033303.2	NM_001033303.2		229665	114431239	NM_001033303.2	Ampd1	NP_001028475.2	ILMN_2971142	000610671	S	2042	TTCACCAAGGAGCCCCTGATGGAAGAATACGCCATCGCTGCGCAAGTCTT	3	+	102902758-102902766:102902949-102902989	3qF2.2	Mus musculus adenosine monophosphate deaminase 1 (isoform M) (Ampd1), mRNA. XM_921992		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]; Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [evidence IEA]	AI553520; Ampd-1	AI553520; Ampd-1
Mus musculus	RefSeq	ILMN_197624	ILMN_259430	AMPD1	NM_001033303.2	NM_001033303.2		229665	114431239	NM_001033303.2	Ampd1	NP_001028475.2	ILMN_1237871	004290273	S	2102	ACGTGTGACATGTGTGAGGTGGCAAGGAACAGTGTCCTGCAGTGTGGGAT	3	+	102903000-102903049	3qF2.2	Mus musculus adenosine monophosphate deaminase 1 (isoform M) (Ampd1), mRNA. XM_921992		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]; Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [evidence IEA]	AI553520; Ampd-1	AI553520; Ampd-1
Mus musculus	RefSeq	ILMN_210683	ILMN_210683	NOC2L	NM_021303.2	NM_021303.2		57741	124301226	NM_021303.2	Noc2l	NP_067278.2	ILMN_2851005	002600132	S	2312	CCTCGACAGCAACTGTGCGGCGAGAGGACAGCAGAGCGTAAACAGGCTTT					Mus musculus nucleolar complex associated 2 homolog (S. cerevisiae) (Noc2l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35067] [evidence ISA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISA]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence ISA]; Interacting selectively with a histone that is assembled into a nucleosome [goid 31493] [evidence ISA]; Interacting selectively with one of the p53 family of proteins [goid 2039] [evidence ISA]	AA410003; NIR; AF155546	AA410003; NIR; AF155546
Mus musculus	RefSeq	ILMN_235246	ILMN_235246	HIST1H1C	NM_015786.1	NM_015786.1		50708	9845256	NM_015786.1	Hist1h1c	NP_056601.1	ILMN_2855315	000050079	S	1252	CGGTTTGTTTGCCACAGCGATGGAGTTGTGGGTTGAACTGCGTCACAACC	13	+	23831927-23831976	13qA3.1	Mus musculus histone cluster 1, H1c (Hist1h1c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another [goid 16584] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MGC107646; His1a; H1.2; H1c; H1f2; 0610008C09Rik; H1var1	MGC107646; His1a; H1.2; H1c; H1f2; 0610008C09Rik; H1var1
Mus musculus	Riken	ILMN_203234	ILMN_203234	SMCY	ri|C030040N04|PX00075G03|AK047790|2178					AK047790	Smcy		ILMN_1256584	000510132	S	2083	GTAGAAGTCAGACAAACAACCCCATGGAAGGAAAAGAGTCCCAAGAGGAG										
Mus musculus	RefSeq	ILMN_198257	ILMN_311796	LOC100044699	XM_001472722.1	XM_001472722.1		100044699	149269912	XM_001472722.1	LOC100044699	XP_001472772.1	ILMN_1247563	000540451	S	1057	CGCCGCGACACACGGGTGGAAATCCTAATGGAGGGATCGCTGACTTCCTT					PREDICTED: Mus musculus hypothetical protein LOC100044699 (LOC100044699), mRNA.					
Mus musculus	RefSeq	ILMN_200535	ILMN_311796	LOC100044699	XM_001472722.1	XM_001472722.1		100044699	149269912	XM_001472722.1	LOC100044699	XP_001472772.1	ILMN_2539101	006220411	S	2348	CGGGGACTCAGGCAAGACCAAGACGGTGACCCGTAAGAAATATGAGCGGA					PREDICTED: Mus musculus hypothetical protein LOC100044699 (LOC100044699), mRNA.					
Mus musculus	RefSeq	ILMN_190605	ILMN_255533	TMEM167B	NM_026198.1	NM_026198.1		67495	21312927	NM_026198.1	Tmem167b	NP_080474.1	ILMN_1215233	002120279	S	2621	ATGAGGGTAACAATATTACTTCAGATTCAGGCTGGCGTGGCCACCAACCC	3	-	108359449-108359498	3qF3	Mus musculus transmembrane protein 167B (Tmem167b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_223069	ILMN_223069	ZFP811	NM_183177.1	NM_183177.1		240063	34147227	NM_183177.1	Zfp811	NP_899000.1	ILMN_1260451	005390370	S	1823	TAGCTGTGGTGTTTTCACATAAACTCACTGGAGAAAAGGGGGACTTTTTG	17	-	32934206-32934255	17qB1	Mus musculus zinc finger protein 811 (Zfp811), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC052046; MGC62423	BC052046; MGC62423
Mus musculus	MEEBO	ILMN_217535	ILMN_217535	1810022K09RIK	scl069126.1_46				51707561	XM_485210	1810022K09Rik		ILMN_2684402	004560181	S	488	TGGCTCAGTTGTAATACAGAGATAGTGCATCACATTCCCCCAAAGATCAA										
Mus musculus	RefSeq	ILMN_199405	ILMN_199405	OLFR1271	NM_146793.1	NM_146793.1		258789	22129262	NM_146793.1	Olfr1271	NP_667004.1	ILMN_2712519	001300743	S	857	CTCTAAGGAATACAGAAATGAAAAATGCTATACGTATGTTCTGGAGCCAA	2	-	90105679-90105728	2qE1	Mus musculus olfactory receptor 1271 (Olfr1271), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123514; MGC123497; MOR227-5	MGC123514; MGC123497; MOR227-5
Mus musculus	RefSeq	ILMN_224104	ILMN_258920	PAK1	NM_011035.2	NM_011035.2		18479	112181193	NM_011035.2	Pak1	NP_035165.2	ILMN_1214850	006560075	S	1893	GCCTTCTATGAAATAAACACTTGTTTCAGGAACTCCGACCCCTCATGTCC	7	+	105059723-105059772	7qE2	Mus musculus p21 (CDKN1A)-activated kinase 1 (Pak1), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IGI]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IGI]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence TAS]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	PAK-1; Paka; AW045634	PAK-1; Paka; AW045634
Mus musculus	RefSeq	ILMN_215229	ILMN_215229	SYT17	NM_138649.1	NM_138649.1		110058	20149721	NM_138649.1	Syt17	NP_619590.1	ILMN_2656996	001260273	S	1334	GAGGCACAATTGATCCTTTTTACAATGAATCCTTCAGCTTCAAAGTTCCC	7	-	125551575-125551624	7qF2	Mus musculus synaptotagmin XVII (Syt17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Bk	Bk
Mus musculus	Riken	ILMN_204215	ILMN_204215	A730029D09RIK	ri|A730029D09|PX00150I20|AK042840|1841					AK042840	A730029D09Rik		ILMN_1224431	007610309	S	701	TGGGAGAGGGTATGTCCCGATGGCTGCAGCTGCTAAGTCTTCTGGTCCCA										
Mus musculus	RefSeq	ILMN_253364	ILMN_253364	GPR155	NM_001080707.1	NM_001080707.1		68526	123959715	NM_001080707.1	Gpr155	NP_001074176.1	ILMN_2968183	005270187	S	2456	CACTTGGGGTTTTGTAGATAATGGCAGTGCTCGACACGGGACCAACCCTC	2	-	73189068-73189117	2qC3	Mus musculus G protein-coupled receptor 155 (Gpr155), mRNA. XM_921852 XM_921857			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AW319992; DEPDC3; F730029F15Rik; PGR22; 1110017O10Rik	AW319992; DEPDC3; F730029F15Rik; PGR22; 1110017O10Rik
Mus musculus	RefSeq	ILMN_198926	ILMN_198926	LOC270152	XM_194453.3	XM_194453.3			38089807	XM_194453.3	LOC270152		ILMN_1231204	006940398	S	1857	TCTGGGATTTCCTCGGGCTGGGAATCTGCACTGATGGCTGAAGCTAGGCC										
Mus musculus	RefSeq	ILMN_200546	ILMN_258266	LOC620693	XR_002803.1	XR_002803.1		620693	94405680	XR_002803.1	LOC620693		ILMN_1247882	004570470	S	1305	ACTTGGTGTCTGAGTACCAACGCTGCAGAGGTCCAGTTCGAATAGGAGGC				18qE4	PREDICTED: Mus musculus similar to tubulin, beta 4 (LOC620693), mRNA.					
Mus musculus	RefSeq	ILMN_219609	ILMN_219609	OXCT2A	NM_022033.2	NM_022033.2		64059	141802949	NM_022033.2	Oxct2a	NP_071316.1	ILMN_1246336	001940373	S	1672	CCTCCAGCTTCCTTCTGCTAGATGGTGTCTATCGAGAGCCATGTGACCTT	4	-	122999138-122999187	4qD2.2	Mus musculus 3-oxoacid CoA transferase 2A (Oxct2a), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving succinyl-CoA, a compound composed of the univalent acyl group 3-carboxypropanoyl, derived from succinic acid by loss of one OH group, linked to coenzyme A [goid 6104] [evidence ISA]; The chemical reactions and pathways involving ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone, as carried out by individual cells. Although 3-hydroxybutyrate is not a ketone, it is classed as a ketone body because it exists in an equilibrium with acetoacetate. Ketone bodies may accumulate in excessive amounts in the body in starvation, diabetes mellitus or in other defects of carbohydrate metabolism [goid 46950] [evidence IDA]	Catalysis of the reaction: succinyl-CoA + a 3-oxo acid = succinate + a 3-oxo-acyl-CoA [goid 8260] [evidence ISA]; Catalysis of the reaction: succinyl-CoA + a 3-oxo acid = succinate + a 3-oxo-acyl-CoA [goid 8260] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Oxct; Scot-t1; Oxct2; Scot	Oxct; Scot-t1; Oxct2; Scot
Mus musculus	RefSeq	ILMN_197764	ILMN_197764	LOC381502	XM_355459.1	XM_355459.1			38077869	XM_355459.1	LOC381502		ILMN_1253156	005670537	S	1230	CACTTTAACTATTCAGGGGATGCTGCGGGCGTCTTCCATGGGCTACTGGG										
Mus musculus	RefSeq	ILMN_216151	ILMN_216151	GPR21	NM_177383.2	NM_177383.2		338346	31341432	NM_177383.2	Gpr21	NP_796357.1	ILMN_1246464	001710343	S	2165	GCATCGTGAGCATGTGTGCAGTAATGACATTACAGTGCTCTTTCTGGGCC	2	+	37341158-37341207	2qB	Mus musculus G protein-coupled receptor 21 (Gpr21), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	C230004C13Rik; MGC130598	C230004C13Rik; MGC130598
Mus musculus	RefSeq	ILMN_221420	ILMN_221420	TH	NM_009377.1	NM_009377.1		21823	6678336	NM_009377.1	Th	NP_033403.1	ILMN_1222014	003420017	S	1457	GGATGAGCTGCACACCCTGACCCAAGCACTGAGTGCCATTAGCTAAATGC	7	-	150078931-150078935:150078936-150078980	7qF5	Mus musculus tyrosine hydroxylase (Th), mRNA.	The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IMP]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IGI]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IMP]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IGI]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 42423] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The chemical reactions and pathways resulting in the formation of dopamine (3,4-dihydroxyphenylethylamine) from L-tyrosine, via the metabolic precursor 3,4-dihydroxy-L-phenylalanine (L-dopa). Dopamine is a catecholamine neurotransmitter and a metabolic precursor of norepinephrine and epinephrine [goid 6585] [evidence TAS]; The chemical reactions and pathways resulting in the formation of dopamine (3,4-dihydroxyphenylethylamine) from L-tyrosine, via the metabolic precursor 3,4-dihydroxy-L-phenylalanine (L-dopa). Dopamine is a catecholamine neurotransmitter and a metabolic precursor of norepinephrine and epinephrine [goid 6585] [evidence IDA]; The chemical reactions and pathways resulting in the formation of dopamine (3,4-dihydroxyphenylethylamine) from L-tyrosine, via the metabolic precursor 3,4-dihydroxy-L-phenylalanine (L-dopa). Dopamine is a catecholamine neurotransmitter and a metabolic precursor of norepinephrine and epinephrine [goid 6585] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-tyrosine + tetrahydrobiopterin + O2 = 3,4-dihydroxy-L-phenylalanine + 4-alpha-hydroxytetrahydrobiopterin + H2O [goid 4511] [evidence TAS]		
Mus musculus	MEEBO	ILMN_223032	ILMN_223032	4933415I03RIK	scl51772.11.1_222	XM_128864.2			28524648	XM_128864.2	4933415I03Rik		ILMN_2758393	006220255	S	1695	ACGCTTATTCTCCGAGTTTGTATACTTTATTAGACATAATTTTCTTCCTT										
Mus musculus	RefSeq	ILMN_223537	ILMN_223537	NPPC	NM_010933.4	NM_010933.4		18159	146134381	NM_010933.4	Nppc	NP_035063.1	ILMN_1220857	003450626	S	653	GGCAATACACAACACCAGCTGTTTTATTATTATTTGGGGAGGGGAGGGTA				1qD	Mus musculus natriuretic peptide precursor type C (Nppc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48513] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence TAS]	MGC130574; CNP	MGC130574; CNP
Mus musculus	Riken	ILMN_203080	ILMN_203080	A430049M06RIK	ri|A430049M06|PX00136I16|AK040044|495					AK040044	A430049M06Rik		ILMN_2554588	007610039	S	268	CAGTGCCTGCAGAGGTGAAGCTGGAATTACCGGTGGTTGTGAGATGTCTG										
Mus musculus	RefSeq	ILMN_199166	ILMN_246584	MKS1	NM_001039684.2	NM_001039684.2		380718	148747584	NM_001039684.2	Mks1	NP_001034773.2	ILMN_1231624	006350564	S	2311	GAAAAGGTGAGAGTAAGGGGCCTCAACTTCCTGGCTAAGTCTCTGTCCCC				11qC	Mus musculus Meckel syndrome, type 1 (Mks1), mRNA. XM_921744				AK190930	AK190930
Mus musculus	RefSeq	ILMN_215426	ILMN_248399	ODAM	NM_027128.1	NM_027128.1		69592	71274124	NM_027128.1	Odam	NP_081404.1	ILMN_2659342	004070685	S	891	ACTTGATTGCAATGATAATCTTCCAAACATTCATGTGACACCCAAGTGCA	5	+	88323061-88323110	5qE1	Mus musculus odontogenic, ameloblast asssociated (Odam), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]		APIN; 2310011G06Rik	APIN; 2310011G06Rik
Mus musculus	RefSeq	ILMN_197558	ILMN_197558	LOC381451	XM_358583.1	XM_358583.1			38076565	XM_358583.1	LOC381451		ILMN_1232731	002260239	S	459	TGGGCTGAGGCTGCTGTCTTTGGCATTCTCGGGGGCTTTCTTGGGAGATC										
Mus musculus	RefSeq	ILMN_201389	ILMN_230643	8430426H19RIK	NM_178875.3	NM_178875.3		71508	110665715	NM_178875.3	8430426H19Rik	NP_849206.2	ILMN_2542129	002940093	S	346	TAAAGCCTTTGCTTTACATGCTCACAGTCATGCCCAAAGGCATGAAAGGA	13	-	62556452-62556501	13qB3	Mus musculus RIKEN cDNA 8430426H19 gene (8430426H19Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC107309; Es113; MGC132990	MGC107309; Es113; MGC132990
Mus musculus	RefSeq	ILMN_218226	ILMN_230643	8430426H19RIK	NM_178875.3	NM_178875.3		71508	110665715	NM_178875.3	8430426H19Rik	NP_849206.2	ILMN_2693167	001990762	S	1798	TGAATGTATAAGTGAACATACTGAAGAGAAAGACTATGAATGTGATCATA	13	-	62555000-62555049	13qB3	Mus musculus RIKEN cDNA 8430426H19 gene (8430426H19Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC107309; Es113; MGC132990	MGC107309; Es113; MGC132990
Mus musculus	RefSeq	ILMN_211500	ILMN_211500	NAGK	NM_019542.1	NM_019542.1		56174	9506738	NM_019542.1	Nagk	NP_062415.1	ILMN_2851330	005050274	S	911	CTTCAGGAAGGCTGGAGAGATGCTGGGCAGACATGTTGTGGCAGTATTGC	6	+	83751131-83751180	6qC3	Mus musculus N-acetylglucosamine kinase (Nagk), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate [goid 9384] [evidence IDA]; Catalysis of the reaction: ATP + N-acetyl-D-glucosamine = ADP + N-acetyl-D-glucosamine 6-phosphate [goid 45127] [evidence IDA]	Gnk	Gnk
Mus musculus	RefSeq	ILMN_211500	ILMN_211500	NAGK	NM_019542.1	NM_019542.1		56174	9506738	NM_019542.1	Nagk	NP_062415.1	ILMN_2653215	006200370	S	269	TTCTGAGGATGGGCAGATCCTGGCAGAAGCAGATGGACTGAGCACAAACC	6	+	83746943-83746985:83747171-83747177	6qC3	Mus musculus N-acetylglucosamine kinase (Nagk), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate [goid 9384] [evidence IDA]; Catalysis of the reaction: ATP + N-acetyl-D-glucosamine = ADP + N-acetyl-D-glucosamine 6-phosphate [goid 45127] [evidence IDA]	Gnk	Gnk
Mus musculus	RefSeq	ILMN_211500	ILMN_211500	NAGK	NM_019542.1	NM_019542.1		56174	9506738	NM_019542.1	Nagk	NP_062415.1	ILMN_2652172	000450132	S	993	CTTGGCCTCCCCATTCTGTGTGTGGGCTCAGTGTGGAAGAGCTGGGAGCT	6	+	83751522-83751570:83752262-83752262	6qC3	Mus musculus N-acetylglucosamine kinase (Nagk), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate [goid 9384] [evidence IDA]; Catalysis of the reaction: ATP + N-acetyl-D-glucosamine = ADP + N-acetyl-D-glucosamine 6-phosphate [goid 45127] [evidence IDA]	Gnk	Gnk
Mus musculus	RefSeq	ILMN_211500	ILMN_211500	NAGK	NM_019542.1	NM_019542.1		56174	9506738	NM_019542.1	Nagk	NP_062415.1	ILMN_2616461	005290044	S	479	GTTGAGGCACCGCTTTCCCAACCTGAGTGAAAACTACTTAATCACCACGG	6	+	83748018-83748067	6qC3	Mus musculus N-acetylglucosamine kinase (Nagk), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate [goid 9384] [evidence IDA]; Catalysis of the reaction: ATP + N-acetyl-D-glucosamine = ADP + N-acetyl-D-glucosamine 6-phosphate [goid 45127] [evidence IDA]	Gnk	Gnk
Mus musculus	RefSeq	ILMN_196186	ILMN_224664	NKX2-4	NM_023504.1	NM_023504.1		228731	28202072	NM_023504.1	Nkx2-4	NP_075993.1	ILMN_2719346	004610670	S	1015	TACGGCGGAGGCGTGCTCGGCGCCAACCTGCTCTATGGCAGAACGTGGTG	2	-	146909612-146909661	2qG2	Mus musculus NK2 transcription factor related, locus 4 (Drosophila) (Nkx2-4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nkx-2.4; 1700001P03Rik; tinman	Nkx-2.4; 1700001P03Rik; tinman
Mus musculus	RefSeq	ILMN_190208	ILMN_190208	WBP11	NM_021714.3	NM_021714.3		60321	31982142	NM_021714.3	Wbp11	NP_068360.3	ILMN_1213144	005870059	S	2340	GTCAGCGAGGTCTTAGTTACTTGTTTTTGACTCATGTGCCGTGGGCACTA	6	-	136762419-136762468	6qG1	Mus musculus WW domain binding protein 11 (Wbp11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulation of the activity of the enzyme protein phosphatase type 1 [goid 8599] [evidence IDA]	D6Wsu113e; 2510026P17Rik; SIPP1; Npwbp	D6Wsu113e; 2510026P17Rik; SIPP1; Npwbp
Mus musculus	RefSeq	ILMN_220304	ILMN_235169	FAIM3	NM_026976.2	NM_026976.2		69169	141802450	NM_026976.2	Faim3	NP_081252.1	ILMN_1221820	001990546	S	1374	CTAGCACGTTTTCCTTATAGGATCCCTGTCATGGCGTATGTCCTATACCC	1	+	132777250-132777299	1qE4	Mus musculus Fas apoptotic inhibitory molecule 3 (Faim3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		Toso; MGC144826; 1810037B05Rik; MGC144825	Toso; MGC144826; 1810037B05Rik; MGC144825
Mus musculus	RefSeq	ILMN_210712	ILMN_210712	LAMC2	NM_008485.3	NM_008485.3		16782	110624797	NM_008485.3	Lamc2	NP_032511.3	ILMN_1228148	000990082	S	3082	CCCGTGCCAACCTTGCTAAAAACAGAGCCCAAGAAGCGCTAAGTATGGGC	1	-	154977211-154977260	1qG3	Mus musculus laminin, gamma 2 (Lamc2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	AA589349	AA589349
Mus musculus	RefSeq	ILMN_210712	ILMN_210712	LAMC2	NM_008485.3	NM_008485.3		16782	110624797	NM_008485.3	Lamc2	NP_032511.3	ILMN_2775307	000870445	S	4180	AGTCCTGCTGCTATGTCAGGACAAGAGATCTAATCCCGCTGTGGCCAGTA	1	-	154970820-154970869	1qG3	Mus musculus laminin, gamma 2 (Lamc2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	AA589349	AA589349
Mus musculus	RefSeq	ILMN_210712	ILMN_210712	LAMC2	NM_008485.3	NM_008485.3		16782	110624797	NM_008485.3	Lamc2	NP_032511.3	ILMN_1233823	003060255	S	3230	GAGACTCTCCTCTATTAGCCAGAAGGTTGCAGATGCCAGTGACAAGACCC	1	-	154976184-154976233	1qG3	Mus musculus laminin, gamma 2 (Lamc2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	AA589349	AA589349
Mus musculus	MEEBO	ILMN_223972	ILMN_223972	NEDD1	scl37604.17_345				6679031	NM_008682	Nedd1		ILMN_2772461	002630372	S	3235	GCAGCTATGGCCGCATTATGACTTGTAACAAGTCCCCTTACATGTCACTC										
Mus musculus	RefSeq	ILMN_219586	ILMN_219586	RAG2	NM_009020.3	NM_009020.3		19374	144227233	NM_009020.3	Rag2	NP_033046.1	ILMN_1245983	000870390	S	3264	GAGCTCAGACAAAGGTTTGGGACTATCACTCTCAAGGAGGCTCTACTGCT	2	+	101467536-101467585	2qE2	Mus musculus recombination activating gene 2 (Rag2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The process by which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33151] [evidence IGI]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; The process whereby a lymphoid progenitor cell becomes committed to become any type of B cell [goid 2326] [evidence IMP]; The process by which a lymphoid progenitor cell becomes committed to becoming any type of T cell [goid 2360] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IMP]; The non-specific expansion of B cell populations within a whole or part of an organism to reach to a total number of B cells which will then remain stable over time in the absence of an external stimulus [goid 2358] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Rag-2	Rag-2
Mus musculus	Riken	ILMN_204999	ILMN_204999	2010013E09RIK	ri|9530009I20|PX00112C23|AK035283|2209					AK035283	2010013E09Rik		ILMN_1256124	000360630	S	2121	CTAGGCCCCATGCCCTACAGGCCCCCCCATATTACCTTCAACACATGGTC										
Mus musculus	RefSeq	ILMN_222194	ILMN_222194	OLFR781	NM_146728.1	NM_146728.1		258723	33239325	NM_146728.1	Olfr781	NP_666939.1	ILMN_2819395	003990278	S	560	CAGACACATGGCTGATAGAACAGATGGTGATAGCTGGAGCTGTGTTGACA	10	+	128770498-128770547	10qD3	Mus musculus olfactory receptor 781 (Olfr781), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR114-6	MOR114-6
Mus musculus	RefSeq	ILMN_222194	ILMN_222194	OLFR781	NM_146728.1	NM_146728.1		258723	33239325	NM_146728.1	Olfr781	NP_666939.1	ILMN_2746142	000010088	S	22	CCTTCATTTTGTTGGGTCTCACAGATGATATTCGGCTGCAAATTCTGCTT	10	+	128769960-128770009	10qD3	Mus musculus olfactory receptor 781 (Olfr781), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR114-6	MOR114-6
Mus musculus	RefSeq	ILMN_213716	ILMN_213716	MBC2	NM_011843.2	NM_011843.2		23943	118130020	NM_011843.2	Mbc2	NP_035973.1	ILMN_1240994	000770477	S	3596	CTGGCCACTGGCAGCATTAGCAGTGGCATTCGCTCATGCCAAATACAGCT	10	-	127953760-127953809	10qD3	Mus musculus membrane bound C2 domain containing protein (Mbc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			vp115	vp115
Mus musculus	RefSeq	ILMN_219014	ILMN_219014	GEMIN8	NM_146238.3	NM_146238.3		237221	125628630	NM_146238.3	Gemin8	NP_666350.2	ILMN_2705863	001450270	S	1063	TAGCAATACTGCCTATTGTTTTGCATTTTTAATGTCCTTCTTTAAACCAT	X	+	162627671-162627720	XqF5	Mus musculus gem (nuclear organelle) associated protein 8 (Gemin8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		B130034M20Rik; RP23-224N1.1; MGC32253; BC023488; B930082C09Rik	B130034M20Rik; RP23-224N1.1; MGC32253; BC023488; B930082C09Rik
Mus musculus	RefSeq	ILMN_191758	ILMN_255597	CPEB2	NM_175937.2	NM_175937.2		231207	31341662	NM_175937.2	Cpeb2	NP_787951.1	ILMN_2589667	002370707	S	1786	CCCAGCTCTCGATACATGCATCGTTATCAGCAGCCAAAACACTACAAGCC	5	+	43677293-43677342	5qB3	Mus musculus cytoplasmic polyadenylation element binding protein 2 (Cpeb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any stretch of pyrimidines (cytosine or uracil) in an RNA molecule [goid 8187] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	A630055H10Rik	A630055H10Rik
Mus musculus	MEEBO	ILMN_224275	ILMN_224275	CCNB3	scl54458.14.1_100				33942086	NM_183015	Ccnb3		ILMN_2777737	005570551	S	4347	CTGGGCAGAAATACCAATAGTATGAATTTATTCATTTATCTTATGCATGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]			
Mus musculus	RefSeq	ILMN_252394	ILMN_252394	DHX29	NM_172594.2	NM_172594.2		218629	46852275	NM_172594.2	Dhx29	NP_766182.2	ILMN_2892376	001770358	S	3788	CCTACGGGTGGCTCTTGTACCAGGAGAAGGTGAGGTACACCAGAGTCTAC	13	+	113754920-113754948:113755423-113755443	13qD2.2	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 29 (Dhx29), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	Ddxx; AU043276; E130202M19Rik; 3732415M03	Ddxx; AU043276; E130202M19Rik; 3732415M03
Mus musculus	RefSeq	ILMN_186847	ILMN_252394	DHX29	NM_172594.2	NM_172594.2		218629	46852275	NM_172594.2	Dhx29	NP_766182.2	ILMN_1233045	000830259	S	660	GACAACCGTGGAGGTGAATATGAAGGAGTGGATTTTGAGATATGCTGAGC	13	+	113725691-113725740	13qD2.2	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 29 (Dhx29), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	Ddxx; AU043276; E130202M19Rik; 3732415M03	Ddxx; AU043276; E130202M19Rik; 3732415M03
Mus musculus	RefSeq	ILMN_192758	ILMN_230738	CCDC88A	NM_176841.3	NM_176841.3		108686	63025207	NM_176841.3	Ccdc88a	NP_789811.2	ILMN_2491063	005690435	S	2368	ACATGTGGAAAACTAAGCAAGATTGAATTTGAAAAAAGACAAATGAAAAA	11	+	29363258-29363307	11qA3.3	Mus musculus coiled coil domain containing 88A (Ccdc88a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IDA]; Any process that initiates the activity of the inactive enzyme protein kinase B [goid 32148] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA replication [goid 6275] [evidence IMP]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with protein kinase B, an intracellular kinase that is important in regulating glucose metabolism [goid 43422] [evidence IPI]	Ape; C130096N06Rik; A430106J12Rik; RP23-92B18.2; Giv; C330012F17Rik; Hkrp1; Girdin; AI848406; D130005J21Rik	Ape; C130096N06Rik; A430106J12Rik; RP23-92B18.2; Giv; C330012F17Rik; Hkrp1; Girdin; AI848406; D130005J21Rik
Mus musculus	RefSeq	ILMN_193145	ILMN_230738	CCDC88A	NM_176841.3	NM_176841.3		108686	63025207	NM_176841.3	Ccdc88a	NP_789811.2	ILMN_1258136	003400440	S	7536	CCCACTCTCTGTAATAGTCACTAGCAGGTTGTGTTTATAGCAACCATTGG	11	+	29409085-29409134	11qA3.3	Mus musculus coiled coil domain containing 88A (Ccdc88a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IDA]; Any process that initiates the activity of the inactive enzyme protein kinase B [goid 32148] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA replication [goid 6275] [evidence IMP]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with protein kinase B, an intracellular kinase that is important in regulating glucose metabolism [goid 43422] [evidence IPI]	Ape; C130096N06Rik; A430106J12Rik; RP23-92B18.2; Giv; C330012F17Rik; Hkrp1; Girdin; AI848406; D130005J21Rik	Ape; C130096N06Rik; A430106J12Rik; RP23-92B18.2; Giv; C330012F17Rik; Hkrp1; Girdin; AI848406; D130005J21Rik
Mus musculus	RefSeq	ILMN_240351	ILMN_240351	GM813	NM_001033404.1	NM_001033404.1		328695	85701900	NM_001033404.1	Gm813	NP_001028576.1	ILMN_2806235	002100446	S	531	GCGTTTGAAAGGCACTCGAAAGAAGCCAAGGAGATGACCAGGTGATAGCG	16	-	58556350-58556364:58556365-58556399	16qC1.2	Mus musculus gene model 813, (NCBI) (Gm813), mRNA.				Gm1781	Gm1781
Mus musculus	MEEBO	ILMN_184735	ILMN_184735	V2R12	scl0022303.1_124				6678532	NM_009488	V2r12		ILMN_2500450	004250040	S	20	AAGTAGAGTCTCAGAAAAAGGCAAAACCCAAAAGATATTTCACTGCTTGT										
Mus musculus	Riken	ILMN_202829	ILMN_202829	5930413D20RIK	ri|5930413D20|PX00055M19|AK031140|1993					AK031140	5930413D20Rik		ILMN_1220536	004890332	S	544	AGATTGATGCTGTCACCAGCGCTACCTCCCATACTCGGTATGTGTGCTGC										
Mus musculus	MEEBO	ILMN_187893	ILMN_187893	AA589481	scl35961.11_37				26080425	NM_172162	AA589481		ILMN_2618037	005260653	S	1129	GCAAGAAGCACCAGTTCAAGTGGCCCTCAGGACACCCTCGCTTTCGGTAC										
Mus musculus	RefSeq	ILMN_217649	ILMN_217649	RUFY2	NM_027425.3	NM_027425.3		70432	119637824	NM_027425.3	Rufy2	NP_081701.2	ILMN_2763657	000630709	S	1694	AAAGCACTACAGGGACTGGTCTGGTTAAAAGACAAAGATGCAACCCACTG	10	+	62472141-62472152:62474166-62474203	10qB4	Mus musculus RUN and FYVE domain-containing 2 (Rufy2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	LZ-FYVE; Denn; AI844453; 2610111M19Rik; ZFYVE13	LZ-FYVE; Denn; AI844453; 2610111M19Rik; ZFYVE13
Mus musculus	RefSeq	ILMN_217649	ILMN_217649	RUFY2	NM_027425.3	NM_027425.3		70432	119637824	NM_027425.3	Rufy2	NP_081701.2	ILMN_2685903	005910097	S	1084	GCATGAGATGGAGCTGGCCATGAAGCTGTTGGAGAAAGACATTCACGAGA	10	+	62463019-62463068	10qB4	Mus musculus RUN and FYVE domain-containing 2 (Rufy2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	LZ-FYVE; Denn; AI844453; 2610111M19Rik; ZFYVE13	LZ-FYVE; Denn; AI844453; 2610111M19Rik; ZFYVE13
Mus musculus	RefSeq	ILMN_189910	ILMN_217649	RUFY2	NM_027425.3	NM_027425.3		70432	119637824	NM_027425.3	Rufy2	NP_081701.2	ILMN_2465508	003610753	S	8855	CCCAGAAAAATGTTATGCTTACCCACCCCATTTAAGCAACAGTGACCCAC	10	+	62481409-62481458	10qB4	Mus musculus RUN and FYVE domain-containing 2 (Rufy2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	LZ-FYVE; Denn; AI844453; 2610111M19Rik; ZFYVE13	LZ-FYVE; Denn; AI844453; 2610111M19Rik; ZFYVE13
Mus musculus	RefSeq	ILMN_204621	ILMN_235385	COQ10A	XM_989351.1	XM_989351.1		210582	94389804	XM_989351.1	Coq10a	XP_994445.1	ILMN_1251600	003180561	S	2286	TGCTGCAAAGGGTCGAGTTTGTTTCCCAGCCCCACCTGGAGGCATACTGC				10qD3	PREDICTED: Mus musculus coenzyme Q10 homolog A (yeast), transcript variant 4 (Coq10a), mRNA.					
Mus musculus	RefSeq	ILMN_209546	ILMN_209546	MAPK13	NM_011950.1	NM_011950.1		26415	13994135	NM_011950.1	Mapk13	NP_036080.1	ILMN_2955452	000730059	S	989	CCCTGAGGAGGAGACAGAGGCCCAGCAGCCTTTTGATGATGCCTTAGAAC	17	+	28912701-28912712:28913080-28913117	17qA3.3	Mus musculus mitogen-activated protein kinase 13 (Mapk13), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	SAPK4; Serk4	SAPK4; Serk4
Mus musculus	RefSeq	ILMN_209546	ILMN_209546	MAPK13	NM_011950.1	NM_011950.1		26415	13994135	NM_011950.1	Mapk13	NP_036080.1	ILMN_1212692	001440671	S	841	AGAGCCCCAAGAAGGATTTCACACAGCTCTTCCCACGCGCCAGTCCGCAA	17	+	28912394-28912443	17qA3.3	Mus musculus mitogen-activated protein kinase 13 (Mapk13), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	SAPK4; Serk4	SAPK4; Serk4
Mus musculus	RefSeq	ILMN_210975	ILMN_210975	OLFR141	NM_181818.2	NM_181818.2		257913	120444915	NM_181818.2	Olfr141	NP_861539.2	ILMN_2611205	002630474	S	601	GTGAGTTTCATCGAGCTAGTCACCATTCTGATTGTCCTGGTCTCCTATGC	2	-	86646504-86646553	2qD	Mus musculus olfactory receptor 141 (Olfr141), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	K17; MOR179-5	K17; MOR179-5
Mus musculus	Riken	ILMN_202490	ILMN_202490	1700012K20RIK	ri|1700012K20|ZX00036N12|AK005920|396					AK005920	1700012K20Rik		ILMN_1222981	000730600	S	171	TCTTCAGTGGCGGGAGGGGTGAGGAGGACAAGGAGGGTAAGGTCCACTTT										
Mus musculus	MEEBO	ILMN_189915	ILMN_189915	GPR83	scl37269.5.71_15				6753987	NM_010287	Gpr83		ILMN_2465552	002570612	S	14	GTAACTGAAGCACCAATTGGTTAAGCCTGATTTGGTAACAAACCTAGGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]		
Mus musculus	Riken	ILMN_202849	ILMN_202849	9930016I07RIK	ri|9930016I07|PX00119D04|AK079432|823					AK079432	9930016I07Rik		ILMN_2552783	003780474	S	563	TGGACCATAGTCACCGGTTTCCATAAAATGTGTGCCTTTGCTTCCTGTCT										
Mus musculus	RefSeq	ILMN_254549	ILMN_254549	ANKFN1	NM_001080933.1	NM_001080933.1		382543	124286855	NM_001080933.1	Ankfn1	NP_001074402.1	ILMN_3127224	002510189	A	1963	GACTGCCCCATGCAATTGTTCTTCTACGAGCTCCAGATGGCAGTGGCGGC	11	-	89284116-89284165	11qC	Mus musculus ankyrin-repeat and fibronectin type III domain containing 1 (Ankfn1), mRNA.				Gm1175	Gm1175
Mus musculus	RefSeq	ILMN_188549	ILMN_235084	DNAHC6	XM_974790.1	XM_974790.1		330355	94378791	XM_974790.1	Dnahc6	XP_979884.1	ILMN_2453613	001410022	S	9404	CCAACTTTGTGGGGACTGTCTTCTTACCCTCCAAGAGGATCAGTGATTAC				6qC1	PREDICTED: Mus musculus dynein, axonemal, heavy chain 6 (Dnahc6), mRNA.					
Mus musculus	RefSeq	ILMN_204513	ILMN_213655	PTPRO	NM_011216.2	NM_011216.2		19277	47059068	NM_011216.2	Ptpro	NP_035346.2	ILMN_1216741	006660066	S	828	AGTACCCTTGTGGAGTACAGTGGTGTGAGCCATGAACCCAAACAGCACAG	6	+	137326624-137326673	6qG1	Mus musculus protein tyrosine phosphatase, receptor type, O (Ptpro), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	GLEPP1; PTPROt; PTP-phi; PTP-BK; PTP-U2	GLEPP1; PTPROt; PTP-phi; PTP-BK; PTP-U2
Mus musculus	RefSeq	ILMN_213655	ILMN_213655	PTPRO	NM_011216.2	NM_011216.2		19277	47059068	NM_011216.2	Ptpro	NP_035346.2	ILMN_1226086	001980100	S	2884	GGAGTGTGTTTGCTCTCTTAACCCTGCTGCCTTCATGTCTTTGGACTGAC	6	+	137368850-137368899	6qG1	Mus musculus protein tyrosine phosphatase, receptor type, O (Ptpro), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	GLEPP1; PTPROt; PTP-phi; PTP-BK; PTP-U2	GLEPP1; PTPROt; PTP-phi; PTP-BK; PTP-U2
Mus musculus	RefSeq	ILMN_213655	ILMN_213655	PTPRO	NM_011216.2	NM_011216.2		19277	47059068	NM_011216.2	Ptpro	NP_035346.2	ILMN_1213978	001780019	S	4418	GCGAGTGTGCTCCTCGCTCCAACCTTGAAGCTACGGGTCAGGAGTAGGCA	6	+	137411117-137411166	6qG1	Mus musculus protein tyrosine phosphatase, receptor type, O (Ptpro), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	GLEPP1; PTPROt; PTP-phi; PTP-BK; PTP-U2	GLEPP1; PTPROt; PTP-phi; PTP-BK; PTP-U2
Mus musculus	MEEBO	ILMN_191025	ILMN_191025	2610202E01RIK	scl072494.1_139						2610202E01Rik		ILMN_1224840	000770445	S	16	CCCGCCTTGGAGAAATCCTCCAGGACTTAGGTTTGTGCTTTCTGGTTGCC										
Mus musculus	RefSeq	ILMN_201163	ILMN_201163	LOC382045	XM_356118.1	XM_356118.1			38089552	XM_356118.1	LOC382045		ILMN_2541313	001070711	S	1497	CTGCTCACAAAAGCGTTACTCGGATGCCGAAGCCAAGGCGGAGATGGAGG										
Mus musculus	RefSeq	ILMN_221725	ILMN_221725	MECR	NM_025297.1	NM_025297.1		26922	13384651	NM_025297.1	Mecr	NP_079573.1	ILMN_2739517	001990730	S	1248	CCATATTGTCTCTTCCTACCAGGAGGGTGGGGGACCAACTCTAGGCTCCC	4	+	131423613-131423662	4qD2.3	Mus musculus mitochondrial trans-2-enoyl-CoA reductase (Mecr), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: acyl-CoA + NADP+ = trans-2,3-dehydroacyl-CoA + NADPH + H+ [goid 19166] [evidence IEA]; Interacting selectively, in a ligand dependent manner, with a nuclear receptor protein [goid 16922] [evidence ISO]	Nrbf1; AI195831	Nrbf1; AI195831
Mus musculus	MEEBO	ILMN_186930	ILMN_186930	MAP2K7	scl34117.16_22				6754625	NM_011944	Map2k7		ILMN_2768200	004390279	S	1563	ATTCAATCATAACCTCTGGGCTGGGGTAACCCCCAGGGGCAGAGAGACGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A series of molecular signals in which a stress-activated MAP kinase cascade relays one or more of the signals; MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase [goid 51403] [evidence IDA]	Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_201042	ILMN_260232	GM1096	XM_906502.2	XM_906502.2		381959	94379850	XM_906502.2	Gm1096	XP_911595.1	ILMN_2540880	007150041	S	347	AGGCTATCATTTTTTACCACATATGTGACATTGAACTGTGCAACAGAGCT				7qA3	PREDICTED: Mus musculus gene model 1096, (NCBI) (Gm1096), mRNA.					
Mus musculus	MEEBO	ILMN_190179	ILMN_190179	HS1BP3	scl43409.6.1_34				10946793	NM_021429	Hs1bp3		ILMN_2775918	004490121	S	1151	TGGACATCTTGCAGTATATCCGGGACCATGACACACTTGCCCAAGACTCC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence TAS]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_194773	ILMN_194773	SIX5	scl33010.3_528						Six5		ILMN_1228115	004850202	S	12	AGCCCCACTGATACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221314	ILMN_221314	2900010J23RIK	NM_175190.3	NM_175190.3		72931	142354012	NM_175190.3	2900010J23Rik	NP_780399.1	ILMN_2733835	004760020	S	562	TATGGTTTTCAGATTTTAAAAGATGCTAGAAGCCCTCCAAAGTTTGGGGT	2	-	32134437-32134486	2qB	Mus musculus RIKEN cDNA 2900010J23 gene (2900010J23Rik), mRNA.				AI046671; 1500019F05Rik; RP23-161B9.6	AI046671; 1500019F05Rik; RP23-161B9.6
Mus musculus	RefSeq	ILMN_211007	ILMN_211007	SLC25A19	NM_026071.2	NM_026071.2		67283	142362932	NM_026071.2	Slc25a19	NP_080347.1	ILMN_2611532	005820356	S	178	GATCAGTGTCAGGATTTGTCACCCGTGCCCTGATCAGCCCTTTGGACGTC	11	-	115485530-115485579	11qE2	Mus musculus solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 (Slc25a19), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	TPC; 2900089E13Rik; DNC; MUP1	TPC; 2900089E13Rik; DNC; MUP1
Mus musculus	RefSeq	ILMN_211007	ILMN_211007	SLC25A19	NM_026071.2	NM_026071.2		67283	142362932	NM_026071.2	Slc25a19	NP_080347.1	ILMN_1237074	005490561	S	1401	TGCAGACGGGGCCGGGCTCTTTGCACAGTTCTAACCTATACAACTTGGTC	11	-	115476342-115476391	11qE2	Mus musculus solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 (Slc25a19), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	TPC; 2900089E13Rik; DNC; MUP1	TPC; 2900089E13Rik; DNC; MUP1
Mus musculus	RefSeq	ILMN_213043	ILMN_258423	OLFR895	NM_146875.2	NM_146875.2		258875	153945841	NM_146875.2	Olfr895	NP_667086.2	ILMN_2632950	006380463	S	612	GAGCTCTGCTGTGGTGGGTACAGCTATTATCTTATGTTGCCTCATTATCT				9qA5.1	Mus musculus olfactory receptor 895 (Olfr895), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR170-1	MOR170-1
Mus musculus	MEEBO	ILMN_185050	ILMN_185050	SCL0003547.1_6	scl0003547.1_6						scl0003547.1_6		ILMN_1230443	007330521	S	16	AAAGAGAAGCTGCTGCGGGCGTCGGAGGACGAGCGGGACCGGGTGCTAGA										
Mus musculus	Riken	ILMN_204151	ILMN_204151	FMO3	ri|C730018G15|PX00086M04|AK050123|1261					AK050123	Fmo3		ILMN_1226862	006420719	S	1207	TATGACATGTACCCTGACAAGCATGAAGAGGGCTCTGTTTGTTCTCCTGC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_233693	ILMN_233693	2610028H24RIK	NM_029816.1	NM_029816.1		76964	58037478	NM_029816.1	2610028H24Rik	NP_084092.1	ILMN_3005431	000240097	S	886	CCTGACCGAGGCATCGACCTCCCATCCTAGCTATCCTTAGCACACAAGTG	10	+	75915292-75915341	10qC1	Mus musculus RIKEN cDNA 2610028H24 gene (2610028H24Rik), mRNA.				ORF67	ORF67
Mus musculus	RefSeq	ILMN_259511	ILMN_259511	IGFBPL1	NM_018741.1	NM_018741.1		75426	9055245	NM_018741.1	Igfbpl1	NP_061211.1	ILMN_2828112	000580767	S	2568	ACAACACGTAATTGGGTCTGGCTCACAGAACTGCCCGGATGCAGGAGGCC	4	-	45830706-45830755	4qB1	Mus musculus insulin-like growth factor binding protein-like 1 (Igfbpl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	2810011G06Rik; 2810453O06Rik; IGFBPL	2810011G06Rik; 2810453O06Rik; IGFBPL
Mus musculus	RefSeq	ILMN_196828	ILMN_196828	LOC237759	XM_137835.1	XM_137835.1			20883189	XM_137835.1	LOC237759		ILMN_2525944	000870189	S	951	GCCACCAGGGATCCCTGGAGCCAAGGGTCCCAAAGGACCAAAAGGAGACC										
Mus musculus	MEEBO	ILMN_219142	ILMN_219142	1700095K08RIK	scl35773.11.1_4	XM_134945.1			20890225	XM_134945.1	1700095K08Rik		ILMN_2704802	001340278	S	1193	ACTCTTCAACTATGGGGTCAAGATCAAGTCCTATAAGTACTGGGGTGAGG										
Mus musculus	Riken	ILMN_202686	ILMN_202686	RPGRIP1	ri|A930002K18|PX00065K10|AK020800|947					AK020800	Rpgrip1		ILMN_1233669	005860014	S	627	GCCAACTGTGAGTACCTCGGGCGGGTCCCATGTTGTTACCCACAAAGCTT						A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_213949	ILMN_213949	KIR4.2	scl0001888.1_15				18376408	AJ300828	Kir4.2		ILMN_1215835	006840554	S	30	GTCAGAGAGTGGAAGCAGTCTGACTGGAGAAACGGCTTTGTTCACGGCCC										
Mus musculus	RefSeq	ILMN_188259	ILMN_188259	TOLLIP	NM_023764.3	NM_023764.3		54473	142359098	NM_023764.3	Tollip	NP_076253.1	ILMN_1229720	002680014	S	2112	GCCTTACATTGCCGTTACTTTTTGTTTTCTGAGAATCTGCACACCCGGTT	7	-	149069033-149069082	7qF5	Mus musculus toll interacting protein (Tollip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	4930403G24Rik; 4931428G15Rik	4930403G24Rik; 4931428G15Rik
Mus musculus	MEEBO	ILMN_184865	ILMN_184865	RNF121	scl30951.12_249				27229214	NM_029211	Rnf121		ILMN_2422239	003870673	S	19	GCATAGGCAGAATGAGGCCTGAATAAAGATGGGCTCTGAAAGGGGACTTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184865	ILMN_184865	RNF121	scl30951.12_249				27229214	NM_029211	Rnf121		ILMN_1223096	000360253	S	1256	TATTGGACACTCAGGGCACTCGTCCGTGCTCCCACACAAAGACATTGGGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_205915	ILMN_205915	A830015D01RIK	ri|A830015D01|PX00154N02|AK043646|1116					AK043646	A830015D01Rik		ILMN_1249165	006840465	S	82	TCGCGCCTCAGCCGCCCGGCCAGACATGAGTGAGGCGGCTCGGGATCTCT										
Mus musculus	RefSeq	ILMN_212310	ILMN_311288	LOC100041596	XM_001477538.1	XM_001477538.1		100041596	149234225	XM_001477538.1	LOC100041596	XP_001477588.1	ILMN_1252511	001300241	S	1211	CAGGTTCTCTCTACGTAATTCTTACTGTTCTGGAACTTATGATGTAGACC	1	+	95814420-95814469	1qD	PREDICTED: Mus musculus similar to galactose 3-O-sulfotransferase-2, transcript variant 2 (LOC100041596), mRNA.					
Mus musculus	RefSeq	ILMN_200232	ILMN_200232	LOC386018	XM_359034.1	XM_359034.1			38081015	XM_359034.1	LOC386018		ILMN_2538039	006420626	S	714	CGGAGAGCAGGAATTTGCAACATCAAGAGACTACAGCTGGATCAGCAGAC										
Mus musculus	RefSeq	ILMN_185646	ILMN_253594	5031439G07RIK	NM_001033273.2	NM_001033273.2		223739	142387530	NM_001033273.2	5031439G07Rik	NP_001028445.1	ILMN_1252809	005390181	S	2435	GAGTCTGCATTGTCCTCAGTGGGTGCAAGAGGCCATGTGGGTCATCAGCC	15	-	84778697-84778746	15qE2	Mus musculus RIKEN cDNA 5031439G07 gene (5031439G07Rik), mRNA.				AW554572; mKIAA0930	AW554572; mKIAA0930
Mus musculus	Riken	ILMN_205939	ILMN_205939	C130052O15RIK	ri|C130052O15|PX00169L05|AK048362|874					AK048362	C130052O15Rik		ILMN_2576336	004920519	S	11	AAATGGCGCCGATGTGAGCGAGAGACCGTGTCGCCGAGGAAGACGCCCCT										
Mus musculus	RefSeq	ILMN_229115	ILMN_229115	DTYMK	NM_023136.1	NM_023136.1		21915	12963516	NM_023136.1	Dtymk	NP_075625.1	ILMN_2971845	000670538	S	1	ATCTAACATTGGCGGGAACCTGGCAAGTTGACCGGTGCTGTGCGGGCGAT	1	-	95698402-95698404:95698405-95698451	1qD	Mus musculus deoxythymidylate kinase (Dtymk), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate [goid 4798] [evidence IEA]	TYPK; D10Ertd203e; mtmk; CDC8; Tmk; TMPK; AU044245	TYPK; D10Ertd203e; mtmk; CDC8; Tmk; TMPK; AU044245
Mus musculus	RefSeq	ILMN_209732	ILMN_209732	SLC34A1	NM_011392.2	NM_011392.2		20505	119120880	NM_011392.2	Slc34a1	NP_035522.2	ILMN_2598639	006270180	S	2405	GGCCTTCTGTATACATGGGCCTTACTTCTGCCAATTCTGCTAACTGTGCA	13	+	55515380-55515429	13qB1	Mus musculus solute carrier family 34 (sodium phosphate), member 1 (Slc34a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [evidence IEA]; The continuous turnover of bone matrix and mineral that involves first, an increase in resorption (osteoclastic activity) and later, reactive bone formation (osteoblastic activity). The process of bone remodeling takes place in the adult skeleton at discrete foci. The process ensures the mechanical integrity of the skeleton throughout life and plays an important role in calcium homeostasis. An imbalance in the regulation of bone resorption and bone formation results in many of the metabolic bone diseases, such as osteoporosis [goid 46849] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA];  [goid 15321] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Slc17a2; Npt2a; Npt2	Slc17a2; Npt2a; Npt2
Mus musculus	RefSeq	ILMN_198769	ILMN_236077	GM382	NM_001033241.2	NM_001033241.2		211208	141802851	NM_001033241.2	Gm382	NP_001028413.1	ILMN_1259534	003120369	S	3823	AGCTGCCATAAACCACGGATCTCAGCAAGAACAACCTAAAAGTATGTCCC	X	+	123598271-123598320	XqE3	Mus musculus gene model 382, (NCBI) (Gm382), mRNA.					
Mus musculus	Riken	ILMN_206845	ILMN_206845	D430007J11RIK	ri|D430007J11|PX00193K17|AK084902|1361					AK084902	D430007J11Rik		ILMN_2583102	007510139	S	813	GAGAAGCACTCCTCCATTGCTGGTGGGACTGCAAGCTGGTAAAACCACTT										
Mus musculus	MEEBO	ILMN_188548	ILMN_188548	1700127F24RIK	scl3358.1.1_287						1700127F24Rik		ILMN_2453606	002940753	S	7	GGCTCCTGTGGTTTGCTCCCAGAAACTGCGACAATGACACATTCATCAGG										
Mus musculus	Riken	ILMN_207203	ILMN_207203	C030009H01RIK	ri|C030009H01|PX00665N23|AK081218|2775					AK081218	C030009H01Rik		ILMN_1246086	002450072	S	2379	GGTTTGGAGCCAGAGACATGAAAGGCAGGCAGCAGGGCAGTGACCACATG										
Mus musculus	RefSeq	ILMN_192665	ILMN_243324	PRKAR2B	NM_011158.3	NM_011158.3		19088	89179324	NM_011158.3	Prkar2b	NP_035288.2	ILMN_1253819	007510129	S	3248	GGCGTTCACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTG	12	-	32643404-32643453	12qA3	Mus musculus protein kinase, cAMP dependent regulatory, type II beta (Prkar2b), mRNA.	An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IDA]	AI451071; RII(beta); Pkarb2; AW061005	AI451071; RII(beta); Pkarb2; AW061005
Mus musculus	RefSeq	ILMN_192665	ILMN_243324	PRKAR2B	NM_011158.3	NM_011158.3		19088	89179324	NM_011158.3	Prkar2b	NP_035288.2	ILMN_1220477	002810110	S	604	CCGATGATCAGAGAAACAGATTGCAAGAGGCTTGCAAAGACATCCTGCTG	12	-	32672762-32672811	12qA3	Mus musculus protein kinase, cAMP dependent regulatory, type II beta (Prkar2b), mRNA.	An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IDA]	AI451071; RII(beta); Pkarb2; AW061005	AI451071; RII(beta); Pkarb2; AW061005
Mus musculus	RefSeq	ILMN_252260	ILMN_252260	V1RD21	NM_207547.1	NM_207547.1		404290	46430553	NM_207547.1	V1rd21	NP_997430.1	ILMN_2949970	005090170	S	662	TCCTCACTCCCAATCAGGATGCCAGAGGCCAAGCTGAGTCCAGAGCAACC	7	-	20723726-20723775	7qA3	Mus musculus vomeronasal 1 receptor, D21 (V1rd21), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191042	ILMN_191042	VPS37D	NM_177574.3	NM_177574.3		194309	146198624	NM_177574.3	Vps37d	NP_808242.1	ILMN_1234930	000450315	S	1115	CTTCTGACCTGCACAGGTGAGAGCCTGCCACCCCCAGGAAAGACCATTCT				5qG2	Mus musculus vacuolar protein sorting 37D (yeast) (Vps37d), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC51411; Wbscr24	MGC51411; Wbscr24
Mus musculus	RefSeq	ILMN_198606	ILMN_198606	LOC236856	XM_141841.3	XM_141841.3			38086415	XM_141841.3	LOC236856		ILMN_1258938	003130736	S	2083	ACAGAGGGGCTGAAGGAAGAGTCAGAAAATGAGGATGGGGCATGGGAGTC										
Mus musculus	Riken	ILMN_206620	ILMN_206620	NHE7	ri|7030408G21|PX00312A19|AK078577|1580					AK078577	NHE7		ILMN_1220891	006060102	S	1285	GAGACGTGGTACTACCGATAAGATGGGTCATGCGTAGTGATTGAGCCCCC										
Mus musculus	RefSeq	ILMN_259372	ILMN_259372	AW554918	NM_001033532.2	NM_001033532.2		225289	142348178	NM_001033532.2	AW554918	NP_001028704.1	ILMN_3161241	004200379	S	1011	GCAAGCGTGCGAGCCACACATTTAGCCTTCTAACAGTGATACTTGATGTC	18	+	25448993-25449042	18qA2	Mus musculus expressed sequence AW554918 (AW554918), mRNA.				AI461742; KIAA1328; mKIAA1328; 4921538P22	AI461742; KIAA1328; mKIAA1328; 4921538P22
Mus musculus	RefSeq	ILMN_211561	ILMN_309860	OTTMUSG00000004551	XM_001474235.1	XM_001474235.1		100038514	149252165	XM_001474235.1	OTTMUSG00000004551	XP_001474285.1	ILMN_1258360	001990259	S	768	ACATCCCCACTTTCGAGTGTTATTTCCCAATTTTTGCAGGAACTGCCTGC				4qA2	PREDICTED: Mus musculus predicted gene, OTTMUSG00000004551 (OTTMUSG00000004551), mRNA.					
Mus musculus	MEEBO	ILMN_192905	ILMN_192905	PDE1B	scl47440.14_6				6679242	NM_008800	Pde1b		ILMN_2730293	003420056	S	2828	GTGGGCCCTGTTCTTGTGAAGTCCATCTCCATGGTCATTAGACCTGCCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IMP]	Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]		
Mus musculus	RefSeq	ILMN_212918	ILMN_247088	PNKD	NM_001039509.1	NM_001039509.1		56695	87239983	NM_001039509.1	Pnkd	NP_001034598.1	ILMN_1222177	003460731	S	220	ATACATTCCCAGAAAGAGGGGCAAGAACCCCATGAAAGCCGTGGGGCTAG	1	+	74332531-74332580	1qC3	Mus musculus paroxysmal nonkinesiogenic dyskinesia (Pnkd), transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2810403H05Rik; Tahccp2; 2210013N15Rik; MNCb-5687; Brp17; MR-1; AI854243	2810403H05Rik; Tahccp2; 2210013N15Rik; MNCb-5687; Brp17; MR-1; AI854243
Mus musculus	RefSeq	ILMN_218144	ILMN_218144	HSD17B3	NM_008291.1	NM_008291.1		15487	6680284	NM_008291.1	Hsd17b3	NP_032317.1	ILMN_2885555	004610592	S	744	CCCCAATGACAAAGTACCTAAATAACAAGATGACCAAGACCGCCGATGAG	13	-	64068712-64068761	13qB3	Mus musculus hydroxysteroid (17-beta) dehydrogenase 3 (Hsd17b3), mRNA.		The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NADP+ + testosterone = NADPH + H+ + androst-4-ene-3,17-dione [goid 47045] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212725	ILMN_212725	COX6A2	NM_009943.2	NM_009943.2		12862	83816955	NM_009943.2	Cox6a2	NP_034073.2	ILMN_2629581	002470356	S	397	TCAAATTGGCCTTCTGCACACCGGCTCTGAGAGCCCCTGAGGTTCCAGTG	7	-	135349161-135349210	7qF3	Mus musculus cytochrome c oxidase, subunit VI a, polypeptide 2 (Cox6a2), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	VIaH; COXVIaH	VIaH; COXVIaH
Mus musculus	MEEBO	ILMN_212031	ILMN_212031	SORT1	scl0020661.1_145				34610210	NM_019972	Sort1		ILMN_1232295	005360706	S	2993	GCTTTTCTCCATCCGCAGACAGCCCTGTTCAGAGAGTACCGAGCACCAGC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215284	ILMN_215284	CACNA1F	scl55080.40.1_74	NM_019582.1			9624972	NM_019582.1	Cacna1f		ILMN_2657593	004570593	S	5000	AGAGGCAGTGGGTCAGGAGGCTGAGGAAGAGGAAGCTGAGAACAACCCAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]		
Mus musculus	RefSeq	ILMN_217361	ILMN_217361	KIF2C	NM_134471.3	NM_134471.3		73804	141802894	NM_134471.3	Kif2c	NP_608301.2	ILMN_1218967	001780543	S	2492	ATCCACTGCTGGTGGAAACCTCGCTGCGAGGTGCCGCTGTGAGGTGTGCC	4	-	116839514-116839563	4qD1	Mus musculus kinesin family member 2C (Kif2c), mRNA. XM_986361	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	MCAK; X83316; MGC11883; 4930402F02Rik; Knsl6; ESTM5	MCAK; X83316; MGC11883; 4930402F02Rik; Knsl6; ESTM5
Mus musculus	MEEBO	ILMN_219743	ILMN_219743	API5	scl0011800.1_127	NM_007466.1			6671566	NM_007466.1	Api5		ILMN_1239371	005220390	S	3042	AAAACAATTCCTTTGTGAGAATCACTGCAAGTATTTATGGCGAAAATATT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]			
Mus musculus	MEEBO	ILMN_194826	ILMN_194826	A430108E01RIK	scl00384382.1_186						A430108E01Rik		ILMN_2509973	006550546	S	8	TGTGACGTGAATGGAAAACTATATTTAATGCAGGAGACAACAATCCTATG										
Mus musculus	MEEBO	ILMN_194987	ILMN_194987	9330133O14RIK	scl33224.1_436				31342449	NM_176948	9330133O14Rik		ILMN_2511527	006660193	S	15	GCATGTAGCGTCACATCTTGGAGAGGAGCTGGAGTATTTGTGTGGGGAAG										
Mus musculus	MEEBO	ILMN_194987	ILMN_194987	9330133O14RIK	scl33224.1_436				31342449	NM_176948	9330133O14Rik		ILMN_1221598	002140025	S	1825	AGGATGCTGTTTGTGGATTTCTGTGCCCCTGTCGCTTGTCCCTTTGAACT										
Mus musculus	RefSeq	ILMN_223454	ILMN_242225	LOC671624	XM_988087.1	XM_988087.1		671624	94370662	XM_988087.1	LOC671624	XP_993181.1	ILMN_2764324	004390706	S	130	GCCCGGACCCATGCGGCGCGGCGCGCAGCCCGCGGAGGCCCAGCCCGTGC					PREDICTED: Mus musculus hypothetical protein LOC671624 (LOC671624), mRNA.					
Mus musculus	RefSeq	ILMN_193008	ILMN_241581	TMEM214	NM_144525.3	NM_144525.3		68796	142353473	NM_144525.3	Tmem214	NP_653108.2	ILMN_2629993	003710286	S	589	GCAGGGTCTGTGGAGCTCTTTTTTGACCACTGTCTATTCACCATGCTGCA	5	+	31174159-31174208	5qB1	Mus musculus transmembrane protein 214 (Tmem214), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI841294; 4921530J21Rik; AU018742; C76280; FLJ20254	AI841294; 4921530J21Rik; AU018742; C76280; FLJ20254
Mus musculus	RefSeq	ILMN_211713	ILMN_211713	MTRF1L	NM_175374.3	NM_175374.3		108853	89363036	NM_175374.3	Mtrf1l	NP_780583.1	ILMN_1226275	000610445	S	1332	GGCTAGGAACGTTCTAGTGCAAATCCATTGTGTGCAAATACTTAGCCAGG	10	+	4533365-4533414	10qA1	Mus musculus mitochondrial translational release factor 1-like (Mtrf1l), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code) [goid 6415] [evidence IEA]	Involved in catalyzing the release of a nascent polypeptide chain from a ribosome [goid 3747] [evidence IEA]; A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site [goid 16149] [evidence IEA]	9130004K12Rik	9130004K12Rik
Mus musculus	MEEBO	ILMN_218904	ILMN_218904	4932411K12	scl44452.7.1_18	NM_177812.2			31342956	NM_177812.2	4932411K12		ILMN_2701732	004040609	S	2775	CAGTGTTCCAAACCTTGGGTATGCAGTGGTGGGAGCCTATGATACTTGGG										
Mus musculus	RefSeq	ILMN_192724	ILMN_261621	1500005K14RIK	XM_983541.2	XM_983541.2		76566	149262230	XM_983541.2	1500005K14Rik	XP_988635.2	ILMN_1217606	003850278	S	1141	AGGACAATGATAGGACAGTGATATCTGGGCAGGTGGAGGTGAGCTTGTCC				11qB5	PREDICTED: Mus musculus RIKEN cDNA 1500005K14 gene (1500005K14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217666	ILMN_217666	MFAP3	NM_145426.2	NM_145426.2		216760	84579903	NM_145426.2	Mfap3	NP_663401.2	ILMN_2686125	007210754	S	1456	GCTGGAGTGATGTGTGTTAAGATTGAAAGGTGCCTGGGCCTGAGTAAGAC	11	+	57343911-57343960	11qB1.3	Mus musculus microfibrillar-associated protein 3 (Mfap3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AW536327; 2700079M14Rik; RP23-206L21.3; 2610509F16Rik	AW536327; 2700079M14Rik; RP23-206L21.3; 2610509F16Rik
Mus musculus	MEEBO	ILMN_217029	ILMN_217029	CPVL	scl28987.12.1_57	XM_132566.1			20821269	XM_132566.1	Cpvl		ILMN_2678290	005820373	S	1306	GATCAATCGCTTCATCTATGACAGAGGATGGGAACCTTATAATTCATAAG							The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [evidence IEA]		
Mus musculus	RefSeq	ILMN_226707	ILMN_226707	MLXIP	NM_133917.1	NM_133917.1		208104	83776544	NM_133917.1	Mlxip	NP_598678.1	ILMN_3061863	006510204	I	2375	TCATCTCCTGCCAACAGCTGCTACCTGCCACAGGAGTCCCAGTCAACTGC	5	+	123900229-123900232:123900436-123900481	5qF	Mus musculus MLX interacting protein (Mlxip), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW228700; mKIAA0867; B930074I24; Mir	AW228700; mKIAA0867; B930074I24; Mir
Mus musculus	RefSeq	ILMN_212562	ILMN_226707	MLXIP	NM_133917.1	NM_133917.1		208104	83776544	NM_133917.1	Mlxip	NP_598678.1	ILMN_1223190	002030520	S	943	GGCCTGATCCCTTTGCAACCCAACCTGGACTTCATGGACACCTTTGAGCC	5	+	123893917-123893966	5qF	Mus musculus MLX interacting protein (Mlxip), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW228700; mKIAA0867; B930074I24; Mir	AW228700; mKIAA0867; B930074I24; Mir
Mus musculus	RefSeq	ILMN_226707	ILMN_226707	MLXIP	NM_133917.1	NM_133917.1		208104	83776544	NM_133917.1	Mlxip	NP_598678.1	ILMN_3139380	002100341	A	1595	CAGCCGTGGGACCTCCCCAACCTCATTTAACTTTTATACACCCCAAACCT	5	+	123895979-123896028	5qF	Mus musculus MLX interacting protein (Mlxip), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW228700; mKIAA0867; B930074I24; Mir	AW228700; mKIAA0867; B930074I24; Mir
Mus musculus	RefSeq	ILMN_206196	ILMN_256868	NETO2	XM_922064.2	XM_922064.2		74513	94384205	XM_922064.2	Neto2	XP_927157.1	ILMN_1222253	000130523	S	752	GGAGGTATTTTAAATCCCATTCCAGATTGCCAGTTTGAGCTCTCTGGAGC				8qC3	PREDICTED: Mus musculus neuropilin (NRP) and tolloid (TLL)-like 2, transcript variant 8 (Neto2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217010	ILMN_217010	4930451E10RIK	scl43916.3.1_87	NM_183130.1			34147140	NM_183130.1	4930451E10Rik		ILMN_2678071	001050519	S	351	AAACTTTTCAGCCTGCCCTCTAGAGATCAAATCTTCAATAAACATTTACC										
Mus musculus	Riken	ILMN_204460	ILMN_204460	B130040C13RIK	ri|B130040C13|PX00157D13|AK045144|2217					AK045144	B130040C13Rik		ILMN_2565147	002810343	S	1323	GTGAGTGGGGGAGGGGGGAGACGTGGCAACGCTGTTCTTTCATCAACTTT										
Mus musculus	RefSeq	ILMN_222884	ILMN_313099	LOC100040981	XM_001476028.1	XM_001476028.1		100040981	149254043	XM_001476028.1	LOC100040981	XP_001476078.1	ILMN_2756204	003290382	S	1538	CTGGCGGTGAACATGGATTCAGAACTTCTGCATGTGAATAAATGACAGTC	5	-	94354063-94354103:94354104-94354112	5qE3	PREDICTED: Mus musculus similar to CDNA sequence BC061212 (LOC100040981), mRNA.					
Mus musculus	RefSeq	ILMN_224069	ILMN_313099	LOC100040981	XM_001476028.1	XM_001476028.1		100040981	149254043	XM_001476028.1	LOC100040981	XP_001476078.1	ILMN_2774186	004860100	S	1777	TTTGTCATGGACTTGTAAACTTTTTGTTCTTCACTGTAATATATAATTGA	5	-	94353824-94353873	5qE3	PREDICTED: Mus musculus similar to CDNA sequence BC061212 (LOC100040981), mRNA.					
Mus musculus	RefSeq	ILMN_218047	ILMN_218047	OLFR617	NM_146841.1	NM_146841.1		258838	22129182	NM_146841.1	Olfr617	NP_667052.1	ILMN_2690901	003460292	S	886	CCCATCATTTATGGAGTGAAGACTAAACAAATTCAGGAGAGGGTTATCCA	7	+	110733423-110733472	7qE3	Mus musculus olfactory receptor 617 (Olfr617), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR31-10	MOR31-10
Mus musculus	RefSeq	ILMN_208725	ILMN_208725	APIP	NM_019735.2	NM_019735.2		56369	31981003	NM_019735.2	Apip	NP_062709.2	ILMN_2799945	002490176	S	609	CACTCCTGAAGAGAAGGATCTCAAAGAAAGGATGGCTCATGCCATGAACG	2	+	102892625-102892674	2qE2	Mus musculus APAF1 interacting protein (Apip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	APIP2; Mmrp19; CGI-29	APIP2; Mmrp19; CGI-29
Mus musculus	RefSeq	ILMN_209058	ILMN_209058	TCTEX1D1	NM_026100.2	NM_026100.2		67344	142371576	NM_026100.2	Tctex1d1	NP_080376.1	ILMN_1226708	003800204	S	684	GCCTCTGGAATCCTAAAAGTGATACTGTCTCGTCCTATACTTTCAAAAAT	4	+	102676854-102676903	4qC6	Mus musculus Tctex1 domain containing 1 (Tctex1d1), mRNA.				MGC118261; 1700055O19Rik	MGC118261; 1700055O19Rik
Mus musculus	RefSeq	ILMN_186780	ILMN_209058	TCTEX1D1	NM_026100.2	NM_026100.2		67344	142371576	NM_026100.2	Tctex1d1	NP_080376.1	ILMN_2438439	000020408	S	934	TCCCCCTCCACCAGTCCTCACGAGAGCGACCAAAGCTTCCAGTTGTTTGA	4	+	102677104-102677153	4qC6	Mus musculus Tctex1 domain containing 1 (Tctex1d1), mRNA.				MGC118261; 1700055O19Rik	MGC118261; 1700055O19Rik
Mus musculus	MEEBO	ILMN_222672	ILMN_222672	EIF3S5	scl32211.7.1_6				21313619	NM_025344	Eif3s5		ILMN_2753213	005130170	S	1165	GGCAAAGGGTTTCTTTGTGGTCTTGAGTCACGGTGACTCAGTCAGCTGCT										
Mus musculus	RefSeq	ILMN_199367	ILMN_199367	MRPL51	NM_025595.3	NM_025595.3		66493	146135039	NM_025595.3	Mrpl51	NP_079871.1	ILMN_2653020	007100121	S	564	GAGAAGGGGAACAGGACTTATCCCAGCAAGGAGAGAGCTTTGTGTGCTCG				6qF3	Mus musculus mitochondrial ribosomal protein L51 (Mrpl51), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IDA]	Mrp64; HSPC241; CDA09; 2610511M02Rik	Mrp64; HSPC241; CDA09; 2610511M02Rik
Mus musculus	RefSeq	ILMN_199367	ILMN_199367	MRPL51	NM_025595.3	NM_025595.3		66493	146135039	NM_025595.3	Mrpl51	NP_079871.1	ILMN_2645772	006220253	S	1012	GGGAACTTGTCTGAGTACCACAGCATTTCCCATCCTCTTGAATAGGGCAG				6qF3	Mus musculus mitochondrial ribosomal protein L51 (Mrpl51), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IDA]	Mrp64; HSPC241; CDA09; 2610511M02Rik	Mrp64; HSPC241; CDA09; 2610511M02Rik
Mus musculus	MEEBO	ILMN_190296	ILMN_190296	D130060J02RIK	scl25686.1_154				31342844	NM_177120	D130060J02Rik		ILMN_2699212	007550561	S	3892	GATCTACTATCAGAGGAATTGGGTATCCAGAGGAGATGAAAGCATGGATT										
Mus musculus	MEEBO	ILMN_190296	ILMN_190296	D130060J02RIK	scl25686.1_154				31342844	NM_177120	D130060J02Rik		ILMN_2699213	004590022	S	3904	GAGGAATTGGGTATCCAGAGGAGATGAAAGCATGGATTTAATAGATGTGC										
Mus musculus	MEEBO	ILMN_187077	ILMN_187077	IGHG1_J00453$V00793_IG_HEAVY_CONSTANT_GAMMA_1_792	IGHG1_J00453$V00793_Ig_heavy_constant_gamma_1_792						IGHG1_J00453$V00793_Ig_heavy_constant_gamma_1_792		ILMN_2440960	006420458	S	17	CTCAGCCCATCATGAACACGAATGGCTCTTACTTCGTCTACAGCAAGCTC										
Mus musculus	RefSeq	ILMN_212623	ILMN_212623	KLK1B8	NM_008457.2	NM_008457.2		16624	118130782	NM_008457.2	Klk1b8	NP_032483.1	ILMN_1216962	001500139	S	524	GATGATCTCCAGTGTGTGTTCCTCAAGCTCCTGCCTATTAAGAACTGTAT	7	+	51209615-51209664	7qB4	Mus musculus kallikrein 1-related peptidase b8 (Klk1b8), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Nrpn; TADG14; MGC18615; mGK-8; Klk8	Nrpn; TADG14; MGC18615; mGK-8; Klk8
Mus musculus	RefSeq	ILMN_192689	ILMN_261316	IMPAD1	NM_177730.3	NM_177730.3		242291	118130493	NM_177730.3	Impad1	NP_808398.1	ILMN_1216426	003370291	S	4403	GATGGCCTTCCTGGGACAACCTGGAAGGTCAAAGCAAGAACTCTTGAGAT	4	-	4691672-4691721	4qA1	Mus musculus inositol monophosphatase domain containing 1 (Impad1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: myo-inositol 1-phosphate + H2O = myo-inositol + phosphate [goid 8934] [evidence IEA]	AA408880; 1110001C20Rik; AL022796; AI451589; B230207P20	AA408880; 1110001C20Rik; AL022796; AI451589; B230207P20
Mus musculus	MEEBO	ILMN_184558	ILMN_184558	3010027A04RIK	scl34210.5.1_30				51764372	XM_134514	3010027A04Rik		ILMN_1234708	004830348	S	15	ACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCC										
Mus musculus	RefSeq	ILMN_218342	ILMN_237333	LOC631037	XM_982144.1	XM_982144.1		631037	94372204	XM_982144.1	LOC631037	XP_987238.1	ILMN_2694569	001070619	S	51	CCCACTGCGCTTTTCTCCTGAGAATATGACAGGACGGCATCCCTTTGCCT	4	-	115255531-115255556:115255557-115255580	4qD1	PREDICTED: Mus musculus similar to CYP4B1 (LOC631037), mRNA.					
Mus musculus	RefSeq	ILMN_214724	ILMN_214724	LUC7L	NM_028190.2	NM_028190.2		66978	114158676	NM_028190.2	Luc7l	NP_082466.2	ILMN_3162618	003890192	I	1179	ATTCCAATGGCAAGACTGCATCGCGGAGGTCGGAGGAGAAGGAGGCTGGC	17	+	26418653-26418702	17qA3.3	Mus musculus Luc7 homolog (S. cerevisiae)-like (Luc7l), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]	1810045C04Rik; 2410018D03Rik	1810045C04Rik; 2410018D03Rik
Mus musculus	RefSeq	ILMN_211171	ILMN_211171	CCDC70	NM_026459.3	NM_026459.3		67929	142386013	NM_026459.3	Ccdc70	NP_080735.1	ILMN_2613264	000450292	S	720	AGTCCCTCTGGGAGGAAGAGAATGCCCTCTGGGAGGAAGAAAAAGCCCTC	8	+	23084179-23084228	8qA2	Mus musculus coiled-coil domain containing 70 (Ccdc70), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			1700112P19Rik	1700112P19Rik
Mus musculus	RefSeq	ILMN_198572	ILMN_198572	LOC330686	XM_286081.2	XM_286081.2			38086264	XM_286081.2	LOC330686		ILMN_1213205	004920524	S	373	ACCCTGACAAGGCCTAACAGAGAGAAGAAGACTTATGTTCGATTAGCTCC										
Mus musculus	RefSeq	ILMN_230251	ILMN_230251	TRCG1	NM_001014398.1	NM_001014398.1		541610	71480099	NM_001014398.1	Trcg1	NP_001014420.1	ILMN_3162445	002690431	S	2249	GGAGCTTCGTGGACTGCTGACGAGACAGCTAACCTCAGTTCTCCAGCCTT	9	+	57095789-57095816:57095911-57095932	9qB	Mus musculus taste receptor protein 1 (Trcg1), mRNA.					
Mus musculus	RefSeq	ILMN_192543	ILMN_246646	SYRADB	NM_172656.5	NM_172656.5		227154	87239985	NM_172656.5	Syradb	NP_766244.4	ILMN_2663920	006250273	S	984	GTCCCACCTGCATAGTTTGCTTAAGCACGGACAAAGGCATAGGGCTGTGT	1	+	59049108-59049157	1qC1.3	Mus musculus STE20-related kinase adaptor beta (Syradb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	ILPIPA; ILPIP; B830008M19; D1Ucla2; AA792893; PRO1038; Papk	ILPIPA; ILPIP; B830008M19; D1Ucla2; AA792893; PRO1038; Papk
Mus musculus	RefSeq	ILMN_192543	ILMN_246646	SYRADB	NM_172656.5	NM_172656.5		227154	87239985	NM_172656.5	Syradb	NP_766244.4	ILMN_2681123	003390687	S	1967	CATTTTACTGTTCTCTGGGGAATGAACCCTTCCTCGGAGGACACTGCTTC	1	+	59051615-59051664	1qC1.3	Mus musculus STE20-related kinase adaptor beta (Syradb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	ILPIPA; ILPIP; B830008M19; D1Ucla2; AA792893; PRO1038; Papk	ILPIPA; ILPIP; B830008M19; D1Ucla2; AA792893; PRO1038; Papk
Mus musculus	RefSeq	ILMN_217358	ILMN_217358	INHBC	NM_010565.2	NM_010565.2		16325	31560578	NM_010565.2	Inhbc	NP_034695.1	ILMN_2792344	002940546	S	1535	TGCTGCCTTCCAAAGAAAGGCTCATCTCTCAAATCTGGAGACCCGAGCCC	10	-	126793651-126793700	10qD3	Mus musculus inhibin beta-C (Inhbc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220629	ILMN_220629	RSHL1	NM_031255.1	NM_031255.1		83434	13752582	NM_031255.1	Rshl1	NP_112545.1	ILMN_1238997	006770609	S	2024	AAGAGTACCCCAGCGGCCCCGAAATCACGGAGATGAGTGACCCCACAGTG	7	+	19659470-19659519	7qA3	Mus musculus radial spokehead-like 1 (Rshl1), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence ISA]			RSP4	RSP4
Mus musculus	RefSeq	ILMN_221391	ILMN_221391	OLFR823	NM_146673.2	NM_146673.2		258668	121583929	NM_146673.2	Olfr823	NP_666884.2	ILMN_2734952	001070333	S	896	AGGTAAAAAGTGCTTTGAAGAAGACATTGCTGAGAAAAATACCCTGGCAC	10	-	129548899-129548948	10qD3	Mus musculus olfactory receptor 823 (Olfr823), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR210-4	MOR210-4
Mus musculus	RefSeq	ILMN_211238	ILMN_211238	SECTM1B	NM_026907.3	NM_026907.3		58210	114145547	NM_026907.3	Sectm1b	NP_081183.3	ILMN_1252655	006660296	S	2164	CCGCCCTCACCTGCTGTTCCTCTCGGGCTAGTTTATCTTCTTTACTCTAA	11	-	120914845-120914894	11qE2	Mus musculus secreted and transmembrane 1B (Sectm1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]			K12; 1810003C24Rik; Sectm1	K12; 1810003C24Rik; Sectm1
Mus musculus	Riken	ILMN_206249	ILMN_206249	C130087O04RIK	ri|C130087O04|PX00172H17|AK081929|2589					AK081929	C130087O04Rik		ILMN_1226096	006110176	S	2303	CAGCTGTCACAAGCAGTTCCGGTGTTCCACCACCTCCCTTATGGCTCAGC										
Mus musculus	Riken	ILMN_203630	ILMN_203630	E130119H03RIK	ri|E130119H03|PX00092A18|AK053659|3861					AK053659	E130119H03Rik		ILMN_1213408	001400059	S	3657	AGCTATTATACTTGTCCTAGTAGAGGGCAGAGTTTCAATGTGTCACAGGG										
Mus musculus	RefSeq	ILMN_199303	ILMN_313395	LOC100040657	XM_001475283.1	XM_001475283.1		100040657	149264828	XM_001475283.1	LOC100040657	XP_001475333.1	ILMN_1240828	000840743	S	566	AGCTGCTGGTGGAGCAGGCTGGAACGAAAGTGTCTCATGGGGAAGAAAAG	14	+	3032871-3032920	14qA1	PREDICTED: Mus musculus similar to 1700001E04Rik protein (LOC100040657), mRNA.					
Mus musculus	MEEBO	ILMN_195351	ILMN_195351	THRAP3	scl3008.1.1_10				29788988	NM_146153	Thrap3		ILMN_1219518	003830767	S	2641	GGCCTGGCTATATTTGCAATGATGTGCACATAACACTGTTATTAAGAGGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]		
Mus musculus	MEEBO	ILMN_195351	ILMN_195351	THRAP3	scl3008.1.1_10				29788988	NM_146153	Thrap3		ILMN_2514821	002370452	S	13	TGGGACCTATTAACCCAGGGTCACTCACACAAGCAACAAACACAGTCCGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]		
Mus musculus	MEEBO	ILMN_220924	ILMN_220924	C130022M03RIK	scl0320803.2_12				51769041	XM_488734	C130022M03Rik		ILMN_1258740	007550070	S	3406	CCAGAGCTGTTGTCTTAATTGTGGTGGAACTGCTTTTCATATTCCCTTAG										
Mus musculus	RefSeq	ILMN_198711	ILMN_242791	PPEF1	NM_011147.1	NM_011147.1		237178	124244034	NM_011147.1	Ppef1	NP_035277.1	ILMN_1235025	002320039	S	1611	CCACAGTAGGTCAGGAAGGATTTCATTGGCCGAGTGGGCATTTTCTATGG	X	-	157063736-157063772:157069787-157069799	XqF4	Mus musculus protein phosphatase with EF hand calcium-binding domain 1 (Ppef1), mRNA.		The series of events involved in sensory perception in which a sensory stimulus is received by a cell and converted into a molecular signal [goid 50906] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	PPEF-1	PPEF-1
Mus musculus	RefSeq	ILMN_200873	ILMN_329018	LOC100046339	XM_001476045.1	XM_001476045.1		100046339	149272105	XM_001476045.1	LOC100046339	XP_001476095.1	ILMN_1257544	002070136	S	76	AGCAGCCAAGTGGAGCCAAGTCATCCTGTGACATCGCACTCTGAGGCCAC					PREDICTED: Mus musculus similar to H2A histone family, member B3 (LOC100046339), mRNA.					
Mus musculus	RefSeq	ILMN_199794	ILMN_199794	LOC383940	XM_357336.1	XM_357336.1			38077411	XM_357336.1	LOC383940		ILMN_2536510	003060431	S	184	GAGTCGGTCTTGGATCAAGACATACAGCACATTGTCAATGAGCATGGGCA										
Mus musculus	Riken	ILMN_203823	ILMN_203823	A230051F10RIK	ri|A230051F10|PX00128F21|AK038623|3426					AK038623	A230051F10Rik		ILMN_1255782	006960131	S	1567	CCGCATGGAACACTTGAAGCACTTGAGAGGAGGGAGCCGAAGAGAGTCAG										
Mus musculus	Riken	ILMN_204609	ILMN_204609	4930429A08RIK	ri|5330440F01|PX00054B24|AK030636|2694					AK030636	4930429A08Rik		ILMN_1241414	004180592	S	2436	GCTGCTGCAGTCACTGTGGGAGTGATTCATAGTTGCCTAGCCTCTGTCTC										
Mus musculus	MEEBO	ILMN_214779	ILMN_214779	2310039L15RIK	scl38526.3.1_60	XM_290098.1			28503864	XM_290098.1	2310039L15Rik		ILMN_2651831	000110333	S	439	ACGTCTTGGGATGGGGGTCCAAACCCCTTTCAGCCACTGTCTGCAGTGTC										
Mus musculus	RefSeq	ILMN_215151	ILMN_215151	F8	NM_007977.1	NM_007977.1		14069	6679732	NM_007977.1	F8	NP_032003.1	ILMN_2679421	006200551	S	6444	GGAATGGCTTCTGGAAGCATCCGTGATTTCCAGATTACAGCTTCAGGACA	X	-	72532655-72532704	XqA7.3	Mus musculus coagulation factor VIII (F8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FVIII; Cf8; Cf-8	FVIII; Cf8; Cf-8
Mus musculus	RefSeq	ILMN_215151	ILMN_215151	F8	NM_007977.1	NM_007977.1		14069	6679732	NM_007977.1	F8	NP_032003.1	ILMN_1221937	002940435	S	7249	TGAATTCTCTAGACCCACCATTACTCACTCGCTATCTTCGAATTCACCCC	X	-	72531850-72531899	XqA7.3	Mus musculus coagulation factor VIII (F8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FVIII; Cf8; Cf-8	FVIII; Cf8; Cf-8
Mus musculus	RefSeq	ILMN_215151	ILMN_215151	F8	NM_007977.1	NM_007977.1		14069	6679732	NM_007977.1	F8	NP_032003.1	ILMN_2950044	002000546	S	7124	TACCAGCATGTTTGTGAAAGAGTTCCTTATTTCCAGCAGTCAAGATGGCC	X	-	72531975-72532024	XqA7.3	Mus musculus coagulation factor VIII (F8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FVIII; Cf8; Cf-8	FVIII; Cf8; Cf-8
Mus musculus	RefSeq	ILMN_207466	ILMN_207466	CHN1	NM_029716.2	NM_029716.2		108699	118130637	NM_029716.2	Chn1	NP_083992.1	ILMN_2587749	002340546	I	167	TGACCGGTTCATGAGAAGGGACCTAACACCTTCCAGAAGGCCTCACCTCT	2	-	73463581-73463630	2qC3	Mus musculus chimerin (chimaerin) 1 (Chn1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700112L09Rik; ARHGAP2; AI413815; 2900046J01Rik; 0710001E19Rik; 0610007I19Rik	1700112L09Rik; ARHGAP2; AI413815; 2900046J01Rik; 0710001E19Rik; 0610007I19Rik
Mus musculus	RefSeq	ILMN_201000	ILMN_201000	LOC381946	XM_358681.1	XM_358681.1			38087856	XM_358681.1	LOC381946		ILMN_1228434	006980040	S	481	GGCCCCACAGCATTGGCTGAGTGTTTATGTCTTCCAACCGAGTCTCCATT										
Mus musculus	RefSeq	ILMN_210414	ILMN_210414	SIGLECH	NM_178706.2	NM_178706.2		233274	31341229	NM_178706.2	Siglech	NP_848821.1	ILMN_2928599	006220164	S	2179	GAGTGAGGTCTAGGACAGCCAGAGCTACACAGAGAAACTCTGTCTCAAAG	7	+	55646730-55646779	7qB5	Mus musculus sialic acid binding Ig-like lectin H (Siglech), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC106898; Siglec-H; 6430529G09Rik	MGC106898; Siglec-H; 6430529G09Rik
Mus musculus	MEEBO	ILMN_212305	ILMN_212305	PEA15	scl15925.5_61	NM_008556.1			6678811	NM_008556.1	Pea15		ILMN_2624938	004210538	S	1473	CTGGGGTGTTCCATGGGAGCAGGAGTGAGACGGCGCTTCCCTTATGGAAG										
Mus musculus	RefSeq	ILMN_191949	ILMN_230590	LOC545835	XM_620301.3	XM_620301.3		545835	94377284	XM_620301.3	LOC545835	XP_620301.1	ILMN_2483650	001170296	S	195	CTCTGGACATAGCAATGTGGTCTGGTACCAGCAGACTCTGGGGAAGGAAT	6	+	41043467-41043516		PREDICTED: Mus musculus similar to T-cell receptor beta chain V region CTL-L17 precursor (LOC545835), mRNA.					
Mus musculus	RefSeq	ILMN_222238	ILMN_222238	HTRA1	NM_019564.2	NM_019564.2		56213	142363255	NM_019564.2	Htra1	NP_062510.1	ILMN_2746738	006220703	S	1407	CCCTGAACATGGTTGTCCGCAGGGGCAATGAAGACATTGTGATTACCGTG	7	+	138128572-138128621	7qF3	Mus musculus HtrA serine peptidase 1 (Htra1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Prss11; HTRA; RSPP11; AI429470; L56	Prss11; HTRA; RSPP11; AI429470; L56
Mus musculus	RefSeq	ILMN_218763	ILMN_218763	LACTB2	NM_145381.2	NM_145381.2		212442	118130117	NM_145381.2	Lactb2	NP_663356.1	ILMN_2699921	000520609	S	1192	ATTAAGAATAATAGATTTTGAACAATTCAAACCAGTTAATACTTTAGAGT	1	-	13616626-13616675	1qA3	Mus musculus lactamase, beta 2 (Lactb2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	E430032H21Rik; Cgi-83; MGC7674	E430032H21Rik; Cgi-83; MGC7674
Mus musculus	RefSeq	ILMN_214338	ILMN_214338	ATF5	NM_030693.1	NM_030693.1		107503	13507623	NM_030693.1	Atf5	NP_109618.1	ILMN_2646985	006520129	S	1558	GGACAGGAAGGGGTGATTGTAGTTGGTAACTAGGGGTCATTTTAGCTCTG	7	-	52067748-52067797	7qB4	Mus musculus activating transcription factor 5 (Atf5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]	AFTA; Atf7; MGC102397; Atfx; ODA-10	AFTA; Atf7; MGC102397; Atfx; ODA-10
Mus musculus	RefSeq	ILMN_192391	ILMN_261122	ACTA2	NM_007392.2	NM_007392.2		11475	31982518	NM_007392.2	Acta2	NP_031418.1	ILMN_2710354	001850022	S	238	GGGGGATGAAGCCCAGAGCAAGAGAGGGATCCTGACGCTGAAGTATCCGA	19	-	34326260-34326309	19qC1	Mus musculus actin, alpha 2, smooth muscle, aorta (Acta2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; A process, occurring in the vascular tissue, whereby actin/myosin complex activity generates force through ATP hydrolysis resulting in a change in smooth muscle geometry. This process is always coupled to chemo-mechanical energy conversion [goid 14829] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	0610041G09Rik; SMalphaA; a-SMA; Actvs	0610041G09Rik; SMalphaA; a-SMA; Actvs
Mus musculus	RefSeq	ILMN_218281	ILMN_261122	ACTA2	NM_007392.2	NM_007392.2		11475	31982518	NM_007392.2	Acta2	NP_031418.1	ILMN_2693895	000430068	S	1245	TTGTGGATCAGCGCCTCCAGTTCCTTTCCAAATCATTCCTGCCCAAAGCT	19	-	34316066-34316115	19qC1	Mus musculus actin, alpha 2, smooth muscle, aorta (Acta2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; A process, occurring in the vascular tissue, whereby actin/myosin complex activity generates force through ATP hydrolysis resulting in a change in smooth muscle geometry. This process is always coupled to chemo-mechanical energy conversion [goid 14829] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	0610041G09Rik; SMalphaA; a-SMA; Actvs	0610041G09Rik; SMalphaA; a-SMA; Actvs
Mus musculus	RefSeq	ILMN_261122	ILMN_261122	ACTA2	NM_007392.2	NM_007392.2		11475	31982518	NM_007392.2	Acta2	NP_031418.1	ILMN_2923445	002140255	S	1330	CAGACATGTGCTACCCTTAACTTGTAGCCCTGGCCTAGCAACACTGATTC	19	-	34315981-34316030	19qC1	Mus musculus actin, alpha 2, smooth muscle, aorta (Acta2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; A process, occurring in the vascular tissue, whereby actin/myosin complex activity generates force through ATP hydrolysis resulting in a change in smooth muscle geometry. This process is always coupled to chemo-mechanical energy conversion [goid 14829] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	0610041G09Rik; SMalphaA; a-SMA; Actvs	0610041G09Rik; SMalphaA; a-SMA; Actvs
Mus musculus	RefSeq	ILMN_211465	ILMN_211465	4930471M23RIK	NM_175675.2	NM_175675.2		74919	141801901	NM_175675.2	4930471M23Rik	NP_783606.1	ILMN_2616180	002680220	S	2762	AACAGCTTTCTTTGTGAGGGGAAGGGGCTCTTGATGAGCTAAGCCCTCAG	5	+	30961806-30961855	5qB1	Mus musculus RIKEN cDNA 4930471M23 gene (4930471M23Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730478O19Rik; p40	5730478O19Rik; p40
Mus musculus	RefSeq	ILMN_196761	ILMN_196761	IFNA5	NM_010505.1	NM_010505.1		15968	6754295	NM_010505.1	Ifna5	NP_034635.1	ILMN_1220596	004480592	S	497	GGTCAGAGCAGAAGTCTGGAGAGCCCTGTCTTCCTCAGTTAACTTGCTGG	4	+	88481925-88481974	4qC4	Mus musculus interferon alpha 5 (Ifna5), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	Ifa5	Ifa5
Mus musculus	RefSeq	ILMN_196761	ILMN_196761	IFNA5	NM_010505.1	NM_010505.1		15968	6754295	NM_010505.1	Ifna5	NP_034635.1	ILMN_1253698	002140047	S	333	AGTCCATCAGCAGCTCAATGACCTCAAAGCCTGTGTGATGCAACAGGTCG	4	+	88481761-88481810	4qC4	Mus musculus interferon alpha 5 (Ifna5), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	Ifa5	Ifa5
Mus musculus	RefSeq	ILMN_198254	ILMN_239041	LOC671761	XM_988958.1	XM_988958.1		671761	94377023	XM_988958.1	LOC671761	XP_994052.1	ILMN_1217537	002850427	S	481	CAGGAGAGAAGCATCAAGATGACCTGATTTCACCACAAGCCTGGATTGCC					PREDICTED: Mus musculus hypothetical protein LOC671761 (LOC671761), mRNA.					
Mus musculus	RefSeq	ILMN_221970	ILMN_221970	EPO	NM_007942.2	NM_007942.2		13856	113931667	NM_007942.2	Epo	NP_031968.1	ILMN_2742822	006760615	S	167	CTGCGACAGTCGAGTTCTGGAGAGGTACATCTTAGAGGCCAAGGAGGCAG	5	-	137926402-137926450:137926961-137926961	5qG2	Mus musculus erythropoietin (Epo), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IDA]; The chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 42541] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with the erythropoietin receptor [goid 5128] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197467	ILMN_316706	LOC676604	XR_031200.1	XR_031200.1		676604	149265931	XR_031200.1	LOC676604		ILMN_1256822	001980398	S	153	GGGATGGCCAGAATCCTTACACAGAGTCAATGGATATTCTAGAAGACCTC					PREDICTED: Mus musculus similar to TATA box-binding protein-associated factor, RNA polymerase II, K, 18kD (LOC676604), misc RNA.					
Mus musculus	RefSeq	ILMN_220968	ILMN_253344	5830431A10RIK	XR_002313.1	XR_002313.1		76024	94394746	XR_002313.1	5830431A10Rik		ILMN_2729252	001770411	S	528	GCCAACGACTTGAGTAAACATCGCAGACCCCTTTTTGGCAGTCAGCAAAC	13	-	24690344-24690393	13qA3.1	PREDICTED: Mus musculus RIKEN cDNA 5830431A10 gene (5830431A10Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_214464	ILMN_214464	CYP17A1	NM_007809.2	NM_007809.2		13074	42476041	NM_007809.2	Cyp17a1	NP_031835.2	ILMN_2874352	000670653	S	1611	GTGCGACAAGCATGGAAGGATGCACAGGTTGAGGTTAGCACCTAGAGGCC	19	-	46741809-46741814:46741815-46741858	19qC3	Mus musculus cytochrome P450, family 17, subfamily a, polypeptide 1 (Cyp17a1), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol [goid 6704] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: a steroid + AH2 + O2 = a 17a-hydroxysteroid + A + H2O [goid 4508] [evidence IMP]; Catalysis of the reaction: a steroid + AH2 + O2 = a 17a-hydroxysteroid + A + H2O [goid 4508] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Cyp17; p450c17	Cyp17; p450c17
Mus musculus	RefSeq	ILMN_201337	ILMN_201337	LOC385054	XM_358020.1	XM_358020.1			38091223	XM_358020.1	LOC385054		ILMN_2541944	005090768	S	6	CCCCCAAGGGTTTCGGCCGCTTAATATTGATTCTCGCCCTGTGGAAATAA										
Mus musculus	RefSeq	ILMN_196592	ILMN_196592	GSTA1	NM_008181.3	NM_008181.3		14857	154350201	NM_008181.3	Gsta1	NP_032207.3	ILMN_1231997	000460403	S	555	CATCCACCTACTGGAAGTTCTCCTCTATGTTGAAGAGTTTGATGCCAGCC				9qE1	Mus musculus glutathione S-transferase, alpha 1 (Ya) (Gsta1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence ISA]	Gst2-1	Gst2-1
Mus musculus	RefSeq	ILMN_216169	ILMN_216169	SYT9	NM_021889.4	NM_021889.4		60510	146135070	NM_021889.4	Syt9	NP_068689.2	ILMN_2668020	006380750	S	3613	TGTGGGGGCATTCAGGCGAAGAAGACTACCCACGTGGTAAACAGATGGCT				7qE3	Mus musculus synaptotagmin IX (Syt9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_202000	ILMN_208912	PIK3AP1	NM_031376.2	NM_031376.2		83490	84872201	NM_031376.2	Pik3ap1	NP_113553.1	ILMN_1257623	000770189	S	3595	ACCCAGGTATGGGACTATCAGCTGCCGCCTTCACTTTGGGCTTTCATACC	19	-	41347726-41347775	19qC3	Mus musculus phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 5066] [evidence IDA]	BCAP; 1810044J04Rik	BCAP; 1810044J04Rik
Mus musculus	Riken	ILMN_207172	ILMN_207172	F830002E14RIK	ri|F830002E14|PL00004M15|AK089567|1280					AK089567	F830002E14Rik		ILMN_1215076	004850010	S	1068	TTCCGTGATTTTCAGTTTTCTCGCCATATTCCAGGTCCTACAGTGTGGAG										
Mus musculus	RefSeq	ILMN_217995	ILMN_255566	6330500D04RIK	NM_001080381.1	NM_001080381.1		193385	123314461	NM_001080381.1	6330500D04Rik	NP_001073850.1	ILMN_2690249	006620360	S	2127	GCAGTACAAAGAGTTCCAGGATCTGAACCAAGAAGTCACTCACTTGGATG	13	+	24793539-24793588	13qA3.1	Mus musculus RIKEN cDNA 6330500D04 gene (6330500D04Rik), transcript variant 2, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	E430013J17Rik; 1700108N18Rik; AI225904	E430013J17Rik; 1700108N18Rik; AI225904
Mus musculus	RefSeq	ILMN_217995	ILMN_255566	6330500D04RIK	NM_001080381.1	NM_001080381.1		193385	123314461	NM_001080381.1	6330500D04Rik	NP_001073850.1	ILMN_2758418	004010519	S	1425	GCGAGACACTTTCTTTGCCACGTTGCACCACAACCACTCTGTCGGTGACC	13	+	24788372-24788421	13qA3.1	Mus musculus RIKEN cDNA 6330500D04 gene (6330500D04Rik), transcript variant 2, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	E430013J17Rik; 1700108N18Rik; AI225904	E430013J17Rik; 1700108N18Rik; AI225904
Mus musculus	RefSeq	ILMN_222881	ILMN_222881	GATA1	NM_008089.1	NM_008089.1		14460	6679946	NM_008089.1	Gata1	NP_032115.1	ILMN_1237279	005910687	S	1273	CCAGCAGCACCAGCGTGATCGCCCCACTCAGTTCTTGAAGGTACACAGAA	X	-	7536870-7536882:7536883-7536919	XqA1.1	Mus musculus GATA binding protein 1 (Gata1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Gf-1; Gata-1	Gf-1; Gata-1
Mus musculus	RefSeq	ILMN_222881	ILMN_222881	GATA1	NM_008089.1	NM_008089.1		14460	6679946	NM_008089.1	Gata1	NP_032115.1	ILMN_2935686	002230397	S	1433	TCCTGCCTCTACCTCCCGAGTACTGAGATTCAGGCATGTATTGCTATGCC	X	-	7536710-7536759	XqA1.1	Mus musculus GATA binding protein 1 (Gata1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Gf-1; Gata-1	Gf-1; Gata-1
Mus musculus	RefSeq	ILMN_186471	ILMN_186471	TRIM11	NM_053168.1	NM_053168.1		94091	16716454	NM_053168.1	Trim11	NP_444398.1	ILMN_2435814	005360349	S	1970	TAGCGTGGCCCCAGAGATGAAGCAATCTAGTAGGGGCTGAATCCTACAGG	11	+	58804678-58804727	11qB1.3	Mus musculus tripartite motif-containing 11 (Trim11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]		
Mus musculus	MEEBO	ILMN_219930	ILMN_219930	2810039B14RIK	scl47816.3.1_30				51829764	XM_488747	2810039B14Rik		ILMN_2715371	005570364	S	782	GGCCTTCATCTGGGGCTCGGTGCTCATCGAACACCAGCTCATTCACACTG										
Mus musculus	RefSeq	ILMN_198219	ILMN_198219	LOC240170	XM_140167.1	XM_140167.1			20901583	XM_140167.1	LOC240170		ILMN_1250366	007320189	S	1	ATGGCCTCCATTTGTCAATCAACTGCAGAAGGCATCTTTTCACATTCATC										
Mus musculus	RefSeq	ILMN_250346	ILMN_250346	ZFP2	NM_001044697.1	NM_001044697.1		22678	113374175	NM_001044697.1	Zfp2	NP_001038162.1	ILMN_3100688	000840500	A	2956	CTGAGCAAGCAGCACTCCTCATGGCATCAGCTCCTGCCTCTAGGTTCCTG	11	-	50712296-50712345	11qB1.3	Mus musculus zinc finger protein 2 (Zfp2), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9930007F06Rik; Fnp-2; mszf87; mkr-2; MGC107189; Zfp-2	9930007F06Rik; Fnp-2; mszf87; mkr-2; MGC107189; Zfp-2
Mus musculus	RefSeq	ILMN_217276	ILMN_217276	MMAB	NM_029956.2	NM_029956.2		77697	40254151	NM_029956.2	Mmab	NP_084232.1	ILMN_1212791	003440634	S	946	GAGGCCACGGAGGGGATGGGCTCCTCGGAATTGAGAATGAACATGGGGAA	5	-	114694024-114694073	5qF	Mus musculus methylmalonic aciduria (cobalamin deficiency) type B homolog (human) (Mmab), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 9236] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + cob(I)alamin + H2O = phosphate + diphosphate + adenosylcobalamin [goid 8817] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ATR; 9130222L19Rik	ATR; 9130222L19Rik
Mus musculus	RefSeq	ILMN_217276	ILMN_217276	MMAB	NM_029956.2	NM_029956.2		77697	40254151	NM_029956.2	Mmab	NP_084232.1	ILMN_2959956	000540452	S	2750	GCCTGAACTTGTAGCACATCCCAATGATAAATGTCCCCCGTTCCAAGTCC	5	-	114692220-114692269	5qF	Mus musculus methylmalonic aciduria (cobalamin deficiency) type B homolog (human) (Mmab), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 9236] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + cob(I)alamin + H2O = phosphate + diphosphate + adenosylcobalamin [goid 8817] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ATR; 9130222L19Rik	ATR; 9130222L19Rik
Mus musculus	RefSeq	ILMN_188307	ILMN_230541	IRX6	NM_022428.2	NM_022428.2		64379	68448552	NM_022428.2	Irx6	NP_071873.2	ILMN_2624301	003870193	S	2287	CTGTGTAACTTTCTTGCTGAAATGGTCTCCAAGGACTGTCTGTGTCTCCT	8	+	95203886-95203935	8qC5	Mus musculus Iroquois related homeobox 6 (Drosophila) (Irx6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC161201	MGC161201
Mus musculus	RefSeq	ILMN_221895	ILMN_224656	BBS1	NM_001033128.2	NM_001033128.2		52028	142366848	NM_001033128.2	Bbs1	NP_001028300.1	ILMN_1237390	003420435	S	3128	GCCCATCCCCCTCAAGACAGTACTACCTGAGCAAGGAGAGCAAAGGGTTC	19	-	4889286-4889335	19qA	Mus musculus Bardet-Biedl syndrome 1 (human) (Bbs1), mRNA. XM_902508 XM_907591 XM_920481 XM_920493 XM_920494 XM_920497 XM_920501	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A cilium that consists of a 9 + 2 arrangement of microtubules, radial spokes, and a dynein apparatus. Motile cilia, found on cells that line the lumenal ducts of various tissues, beat with a characteristic whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface [goid 31514] [evidence IMP]	Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; A process that is carried out at the cellular level and by which the structure of a cilium is organized. Morphogenesis pertains to the creation of form [goid 60271] [evidence IMP]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IGI]; A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function [goid 1895] [evidence IMP]; The assembly of a flagellum. In bacteria, this is a whiplike motility appendage present on the surface of some species; in eukaryotes, flagella are threadlike protoplasmic extensions used to propel flagellates and sperm. Flagella are composed of flagellin and have the same basic structure as cilia but are longer in proportion to the cell and present in much smaller numbers [goid 9296] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The actions or reactions of an organism in response to an odor [goid 42048] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IMP]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; Morphogenesis of photoreceptors, sensory cells that react to the presence of light [goid 8594] [evidence IMP]; The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking [goid 21756] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI451249; D19Ertd609e	AI451249; D19Ertd609e
Mus musculus	MEEBO	ILMN_193520	ILMN_193520	EPB4.1L1	scl20027.27_426				51712788	XM_487678	Epb4.1l1		ILMN_1217998	007400491	S	2	ACACCCTGAGCCTCTTTCCCATTCTGTGTCTCATGCGCCTTTGTTTTCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205014	ILMN_205014	A130024J05RIK	ri|A130024J05|PX00122I10|AK037541|2807					AK037541	A130024J05Rik		ILMN_2569336	006650470	S	2382	CTAAAATCTTCAGCTAGGTCTGAACTAGCAACAAGTTCCTCCACACTTGC										
Mus musculus	RefSeq	ILMN_200285	ILMN_200285	LOC386135	XM_359086.1	XM_359086.1			38081218	XM_359086.1	LOC386135		ILMN_1216435	005310647	S	1593	GCAGCATTTGGGCCTTATTTTGTCCAATGAGAGAGCAGCGTTGGGGGATA										
Mus musculus	RefSeq	ILMN_252903	ILMN_253603	BAIAP2	NM_001037755.2	NM_001037755.2		108100	142369752	NM_001037755.2	Baiap2	NP_001032844.1	ILMN_3163374	003290634	A	1345	GCACTATGGGGAGAGTGAGAAGACCAAGATGCGGGGCTGGTTCCCCTTCT	11	+	119858975-119859004:119859948-119859967	11qE2	Mus musculus brain-specific angiogenesis inhibitor 1-associated protein 2 (Baiap2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	R75030; IRSp53	R75030; IRSp53
Mus musculus	RefSeq	ILMN_211864	ILMN_211864	CENTD3	NM_139206.1	NM_139206.1		106952	27885014	NM_139206.1	Centd3	NP_631945.1	ILMN_1243107	006020255	S	5044	ATGTTATTCCGCTTCCTATGTACTGGAACTGCCTTGAGGCCCTAGAGTGG	18	-	38132358-38132407	18qB3	Mus musculus centaurin, delta 3 (Centd3), mRNA.				AI851258; Drag1; mKIAA4097; E030006K04Rik; KIAA4097; Arap3	AI851258; Drag1; mKIAA4097; E030006K04Rik; KIAA4097; Arap3
Mus musculus	RefSeq	ILMN_220605	ILMN_225462	PDE4C	NM_201607.2	NM_201607.2		110385	118130951	NM_201607.2	Pde4c	NP_963901.1	ILMN_2724315	005890349	S	2611	TTAGATATCAGGAGGCCGGTGACCCTCCTAGAAGACCACTGCAGGCCTCA	8	+	73274493-73274542	8qB3.3	Mus musculus phosphodiesterase 4C, cAMP specific (Pde4c), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	E130301F19Rik; MGC31320; dunce; Dpde1	E130301F19Rik; MGC31320; dunce; Dpde1
Mus musculus	Riken	ILMN_206561	ILMN_206561	E530016P10RIK	ri|E530016P10|PX00319A22|AK089149|1281					AK089149	E530016P10Rik		ILMN_1224376	004280544	S	1228	GTTGGATGGGGTCACAGCCAGGAGGCTTCAGAAGTTGGTCTAATTCTCTG										
Mus musculus	Riken	ILMN_206669	ILMN_206669	NOPE	ri|C230016D20|PX00174C16|AK082162|1137					AK082162	Nope		ILMN_1231305	004220309	S	897	GGTGGAGCAAGCAGAGAGATGACGGCTTGGCAGTTGTAAATGCGAGCTAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]				
Mus musculus	RefSeq	ILMN_220021	ILMN_220021	BNIP3L	NM_009761.2	NM_009761.2		12177	31542233	NM_009761.2	Bnip3l	NP_033891.1	ILMN_2716567	003390053	S	3020	ACTCTCACGGTGAAGCAGCTGTTGGAACTCCTGGTATTAATGGAGCCAGA	14	-	67604191-67604240	14qD1	Mus musculus BCL2/adenovirus E1B interacting protein 3-like (Bnip3l), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]		C86132; Nip3L; D14Ertd719e; Nix	C86132; Nip3L; D14Ertd719e; Nix
Mus musculus	RefSeq	ILMN_219409	ILMN_219409	RAB40B	NM_139147.2	NM_139147.2		217371	66955875	NM_139147.2	Rab40b	NP_631886.1	ILMN_1217761	005270431	S	463	TCCTAAAATCTTGGTGGGAAATCGGCTGCACCTGGCATTCAAGCGACAGG	11	-	121219332-121219381	11qE2	Mus musculus Rab40b, member RAS oncogene family (Rab40b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	SEC4L; rar	SEC4L; rar
Mus musculus	MEEBO	ILMN_213723	ILMN_213723	AOX1	scl17939.35.1_294	NM_009676.1			6753067	NM_009676.1	Aox1		ILMN_1238033	006450414	S	159	GGCCTGCACAGTGATGATCTCGCGGTACAACCCCAGCACCAAGGCGATCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with molybdenum (Mo) ions [goid 30151] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: an aldehyde + H2O + O2 = a carboxylic acid + H2O2 [goid 4031] [evidence IDA]		
Mus musculus	MEEBO	ILMN_191424	ILMN_191424	1700012B15RIK	scl43447.9.129_14				21729768	NM_028796	1700012B15Rik		ILMN_2727461	001570041	S	2621	TACCAAAAATTGTTTTAACACAGACCCTGCAATAAAAAGAGTTAATCATG										
Mus musculus	MEEBO	ILMN_191424	ILMN_191424	1700012B15RIK	scl43447.9.129_14				21729768	NM_028796	1700012B15Rik		ILMN_1246016	000060292	S	14	CAGACTCACTGGAAAGATGCAAAGCAATGTCAGGTTACACAACAAAAGGC										
Mus musculus	Riken	ILMN_206261	ILMN_206261	D030032D21RIK	ri|D030032D21|PX00179L11|AK083499|1252					AK083499	D030032D21Rik		ILMN_2578798	007160630	S	1075	AATGGTACGTGAGGGTCAAAGGGCGCGGAGACAGCAACAAGCAGCAACGG										
Mus musculus	RefSeq	ILMN_200620	ILMN_323935	MCC	NM_001085374.1	NM_001085374.1		328949	145699134	NM_001085374.1	Mcc	NP_001078843.1	ILMN_1224994	001990647	S	1546	CAGTCCTGGGCTCGGAAATCAGTAGCATCGGGGTTTCCAGCAGTGTGGCA				18qB3	Mus musculus mutated in colorectal cancers (Mcc), transcript variant 2, mRNA.				D18Ertd451e; E330037C19	D18Ertd451e; E330037C19
Mus musculus	RefSeq	ILMN_200648	ILMN_323935	MCC	NM_001085374.1	NM_001085374.1		328949	145699134	NM_001085374.1	Mcc	NP_001078843.1	ILMN_1253886	001030050	S	1206	GAGAAAGAGCTGGCTGGACTGCGGGAAGAGAACGAAAGCCTGACGGCCAT				18qB3	Mus musculus mutated in colorectal cancers (Mcc), transcript variant 2, mRNA.				D18Ertd451e; E330037C19	D18Ertd451e; E330037C19
Mus musculus	RefSeq	ILMN_219510	ILMN_219510	GJB1	NM_008124.2	NM_008124.2		14618	22165405	NM_008124.2	Gjb1	NP_032150.2	ILMN_2948476	003180192	S	1236	CACTTTGGGAGTCATGTCGGTGGGGAGGGATGTGGGCAAGCAGAGTGGAG	X	+	98580703-98580752	XqD	Mus musculus gap junction protein, beta 1 (Gjb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]		Cx32; Gjb-1; MGC6217; Cnx32; AI118175	Cx32; Gjb-1; MGC6217; Cnx32; AI118175
Mus musculus	RefSeq	ILMN_188390	ILMN_188390	UQCRC1	NM_025407.2	NM_025407.2		22273	46593020	NM_025407.2	Uqcrc1	NP_079683.2	ILMN_1256673	003610040	S	1481	GATCCGCAGTGGCATGTTCTGGCTGCGCTTCTAGGCAGGAAGTCTGCACA	9	+	108851511-108851544:108851545-108851560	9qF2	Mus musculus ubiquinol-cytochrome c reductase core protein 1 (Uqcrc1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC97899; 1110032G10Rik	MGC97899; 1110032G10Rik
Mus musculus	RefSeq	ILMN_218148	ILMN_218148	RPS16	NM_013647.1	NM_013647.1		20055	7305444	NM_013647.1	Rps16	NP_038675.1	ILMN_1227972	004480026	S	110	CTGTGGCCCACTGCAAACGGGGAAATGGGCTCATCAAGGTGAACGGACGT	7	+	29131037-29131086	7qA3	Mus musculus ribosomal protein S16 (Rps16), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	AA420385; AI317031	AA420385; AI317031
Mus musculus	RefSeq	ILMN_210474	ILMN_310765	RARRES1	XM_001475793.1	XM_001475793.1		109222	149251197	XM_001475793.1	Rarres1	XP_001475843.1	ILMN_2664202	001440121	S	1129	ATTGGGCTCCCTGATTGGGCTCGGCAGGCTCAGCACATCTACCACATAGC	3	-	67283130-67283179	3qE1	PREDICTED: Mus musculus retinoic acid receptor responder (tazarotene induced) 1 (Rarres1), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210474	ILMN_310765	RARRES1	XM_001475793.1	XM_001475793.1		109222	149251197	XM_001475793.1	Rarres1	XP_001475843.1	ILMN_2605971	004850092	S	1237	TTTTCATTACTCTGGACATATTGTGGTTATTTTATGTTGCTGAATTGTTC	3	-	67283022-67283071	3qE1	PREDICTED: Mus musculus retinoic acid receptor responder (tazarotene induced) 1 (Rarres1), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211800	ILMN_211800	ST3GAL3	NM_009176.3	NM_009176.3		20441	141801788	NM_009176.3	St3gal3	NP_033202.2	ILMN_1219183	001340059	S	1730	CCAGAGAGGGACAGTGCCAAGAGACCCGAGGGCCAGTGAGGCCTTGGCAA	4	-	117605528-117605577	4qD2.1	Mus musculus ST3 beta-galactoside alpha-2,3-sialyltransferase 3 (St3gal3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein [goid 8118] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]	Siat3; Siat6	Siat3; Siat6
Mus musculus	Riken	ILMN_203349	ILMN_203349	B430003N09RIK	ri|B430003N09|PX00070M06|AK046548|2982					AK046548	B430003N09Rik		ILMN_2556625	003400022	S	1404	CCAGGAACATGGGAAGCTTACCCGCCCTGAGGCATACAGAGAAGAGGAGC										
Mus musculus	Riken	ILMN_204726	ILMN_204726	GRIA4	ri|B930032D04|PX00163F15|AK047179|3063					AK047179	Gria4		ILMN_1244887	004560491	S	2925	GACAGTGAAGCAGCCAAGGAAGATGGGAGTATATGAGCAGTGACAAAGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus [goid 32281] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210672	ILMN_210672	PALM2	NM_172868.2	NM_172868.2		242481	93004083	NM_172868.2	Palm2	NP_766456.1	ILMN_2670330	007510026	S	1014	GATGAAGACGATGAAAAGTCGCTAAGAGAGAAGACAGTGACGGATGTGTC	4	+	57722853-57722902	4qB3	Mus musculus paralemmin 2 (Palm2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	pEN70; B130066I24; MGC130608; 53-H12	pEN70; B130066I24; MGC130608; 53-H12
Mus musculus	RefSeq	ILMN_210672	ILMN_210672	PALM2	NM_172868.2	NM_172868.2		242481	93004083	NM_172868.2	Palm2	NP_766456.1	ILMN_2608025	001740398	S	2769	GTTCCCATGGAAGAACCACACGCTGTGACCTGCGATGTCACGTCTTCACA	4	+	57724608-57724657	4qB3	Mus musculus paralemmin 2 (Palm2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	pEN70; B130066I24; MGC130608; 53-H12	pEN70; B130066I24; MGC130608; 53-H12
Mus musculus	Riken	ILMN_205214	ILMN_205214	PLAT	ri|E130020K19|PX00208C13|AK053476|4044					AK053476	Plat		ILMN_1232110	001260750	S	3594	AGGCTCCGCATCTAAGGGAGTCAGATCCCAGCAAAGAGGCCTGGGATACT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The orderly movement of smooth muscle cells from one site to another, often during the development of a multicellular organism [goid 14909] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]		
Mus musculus	MEEBO	ILMN_195738	ILMN_195738	DNALI1	scl23832.1.5_6				31340647	NM_175223	Dnali1		ILMN_1241955	001580102	S	1920	TAAAAAACTCTGGGGCTGGGGACTTCCTGTTGCCACAGAACTGGGGTGCG						Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196872	ILMN_250562	GM106	NM_001033288.3	NM_001033288.3		226866	146198589	NM_001033288.3	Gm106	NP_001028460.1	ILMN_1244310	002510280	S	860	ATATAGAGCACCTGGGAGCGACTTCCGAGCATGCGTGTGAATGGGCCGAG				1qA3	Mus musculus gene model 106, (NCBI) (Gm106), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	Riken	ILMN_205318	ILMN_205318	9330102G19RIK	ri|9330102G19|PX00104N21|AK033855|3369					AK033855	9330102G19Rik		ILMN_1251575	006420148	S	3127	ACACAGTGGTCTGGTGACACTTGCTCCTATGTGACTATTCGTTTGCTTGC										
Mus musculus	Riken	ILMN_203372	ILMN_203372	9430072I10RIK	ri|9430072I10|PX00110E24|AK035002|1394					AK035002	9430072I10Rik		ILMN_1252875	005560747	S	1040	ACTGCGAGCGAGACTGACTGTCTTCAAGGCCAGGGTTCTGTTTACACGAG										
Mus musculus	RefSeq	ILMN_247444	ILMN_247444	OLFR225	NM_001011740.2	NM_001011740.2		257886	145699140	NM_001011740.2	Olfr225	NP_001011740.2	ILMN_3160900	004560192	S	706	GCCTTCAACACCTGCTCGTCACACATGGCGGTGGTGTCTCTTTTCTACAG				11qB1.3	Mus musculus olfactory receptor 225 (Olfr225), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-51	MOR256-51
Mus musculus	RefSeq	ILMN_198495	ILMN_198495	LOC212386	XM_142890.2	XM_142890.2			38085856	XM_142890.2	LOC212386		ILMN_2531895	002230064	S	666	CTTGAAGCCTCCTGTCATGGTCCATGTCTCAATGCAAGGACAAGAAGCCC										
Mus musculus	MEEBO	ILMN_215756	ILMN_215756	6720401G13RIK	scl00103012.1_306				51772008	XM_489349	6720401G13Rik		ILMN_1240212	002060750	S	5601	CTATATGTCCTTTAAAAGTGTTCTCTCTCATGAACAATCTCTGCTTTATT										
Mus musculus	RefSeq	ILMN_213250	ILMN_213250	PSAPL1	NM_175249.3	NM_175249.3		76943	124301213	NM_175249.3	Psapl1	NP_780458.2	ILMN_2635197	001340196	S	2157	CCCATATCCTGTCCCACCAAGAGGAGTTTGTCTACTCACCCAGACTTGAG	5	+	36548826-36548875	5qB3	Mus musculus prosaposin-like 1 (Psapl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]		2310020A21Rik	2310020A21Rik
Mus musculus	RefSeq	ILMN_216867	ILMN_216867	FAM134C	NM_026501.2	NM_026501.2		67998	141802672	NM_026501.2	Fam134c	NP_080777.1	ILMN_2676253	007320674	S	475	GTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCATAAGGAATCTTTTGCT	11	-	100964221-100964270	11qD	Mus musculus family with sequence similarity 134, member C (Fam134c), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4933404C01Rik; AI551748	4933404C01Rik; AI551748
Mus musculus	MEEBO	ILMN_218656	ILMN_218656	5730412N02RIK	scl29578.22.1_283				51717052	XM_485819	5730412N02Rik		ILMN_2698625	001440475	S	3151	GGAAGTAGAAGGGAGTGAGTTATACAGTGGTGCGCATGTAGCAATTGAGT										
Mus musculus	RefSeq	ILMN_215167	ILMN_215167	MAS1	NM_008552.3	NM_008552.3		17171	142371805	NM_008552.3	Mas1	NP_032578.2	ILMN_1253860	001570482	S	2180	GCTCTAGCAGGAAGTATCCCAAATGTGACCTGGAGAACCTGGGGAGACTG	17	-	13034116-13034165	17qA1	Mus musculus MAS1 oncogene (Mas1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Mas-1	Mas-1
Mus musculus	RefSeq	ILMN_215938	ILMN_233537	ANKS1B	XM_001003405.1	XM_001003405.1		77531	94388564	XM_001003405.1	Anks1b	XP_001003405.1	ILMN_1243372	004010687	S	188	TGCCTGGTTCTGGGGGGCTGTATGACGCACTGGTCGGTAGTAAAGATTAA	10	+	90006597-90006646	10qC2	PREDICTED: Mus musculus ankyrin repeat and sterile alpha motif domain containing 1B, transcript variant 3 (Anks1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]				
Mus musculus	MEEBO	ILMN_194173	ILMN_194173	4930519F16RIK	scl53958.6.1_10				51772271	XM_486739	4930519F16Rik		ILMN_1255197	003420184	S	1	CCAGTCCTGTTCTATGTCTCCTAATGAACCACTGGGAACTAGTGGGCCTC								Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197867	ILMN_310025	AADACL3	NM_001085503.2	NM_001085503.2		230883	153792399	NM_001085503.2	Aadacl3	NP_001078972.1	ILMN_1240709	002600300	S	1035	GCTCCCAGAAACCTGCATTGTGAGCTGTGAGTATGACCTTCTCCGGGACC				4qE1	Mus musculus arylacetamide deacetylase-like 3 (Aadacl3), mRNA.				Gm435	Gm435
Mus musculus	Riken	ILMN_207221	ILMN_207221	D730008J19RIK	ri|D730008J19|PX00673H17|AK085676|2401					AK085676	D730008J19Rik		ILMN_2585956	006290593	S	2307	TTCAGGATGCTGCAGTGCTCACGGGGAAACGTGCACAACAGGGTAGTGGG										
Mus musculus	RefSeq	ILMN_214127	ILMN_214127	TMEM63C	NM_172583.2	NM_172583.2		217733	42475966	NM_172583.2	Tmem63c	NP_766171.1	ILMN_1233991	005870148	S	2953	GGGGTCAAGCTGATGAGAGTGTGCGTACGGGAAGAGATAGGATGAAGCCC	12	+	88430609-88430658	12qD2	Mus musculus transmembrane protein 63c (Tmem63c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4932420N09; 9330187M14Rik	4932420N09; 9330187M14Rik
Mus musculus	RefSeq	ILMN_220621	ILMN_220621	CPNE6	NM_009947.2	NM_009947.2		12891	25141336	NM_009947.2	Cpne6	NP_034077.1	ILMN_1232850	004180184	S	1932	CTGAGGACCCTCAATAACTTCCTCCAGTGGTTGTGACTTTATGGATGTAA	14	+	56136196-56136245	14qC3	Mus musculus copine VI (Cpne6), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 1786] [evidence IDA]	AU067659; BB076446	AU067659; BB076446
Mus musculus	RefSeq	ILMN_197831	ILMN_197831	LOC230592	XM_143986.2	XM_143986.2			38078690	XM_143986.2	LOC230592		ILMN_2529519	004570327	S	149	GCTCCAAAAATGGTGGGGTAACAAGAAAGGAGCTGGCCACTGTCAGGACC										
Mus musculus	Riken	ILMN_203385	ILMN_203385	AQR	ri|4932441D08|PX00019A05|AK030090|3179					AK030090	Aqr		ILMN_1242046	002060343	S	2827	ACAGGGCGTGCGGCTTTGGAGTTTATCTTGTATATGCCTGCCTGAAGTAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_204677	ILMN_204677	TRRP1	ri|A230054C16|PX00128J01|AK038676|1339					AK038676	Trrp1		ILMN_1243031	006840719	S	922	CCATGGCGAGGAGGGAGCCTTGATCCCAAAGTTGCCCCACTTCTGTCACT										
Mus musculus	RefSeq	ILMN_248708	ILMN_248708	ZKSCAN1	NM_029869.1	NM_029869.1		74570	68510028	NM_029869.1	Zkscan1	NP_084145.1	ILMN_3154351	003450524	A	7535	GGATACCCTATTAGTGGGTGGGCTGTGATGTGGCTCCGTGATTGCCTACC	5	+	138548549-138548598	5qG2	Mus musculus zinc finger with KRAB and SCAN domains 1 (Zkscan1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C87323; 9230118B16Rik; 5930429A01Rik; 9130423L19Rik; KOX18; ZNF139; AI646829; PHZ-37; AI788588; MGC63357	C87323; 9230118B16Rik; 5930429A01Rik; 9130423L19Rik; KOX18; ZNF139; AI646829; PHZ-37; AI788588; MGC63357
Mus musculus	RefSeq	ILMN_187574	ILMN_248708	ZKSCAN1	NM_029869.1	NM_029869.1		74570	68510028	NM_029869.1	Zkscan1	NP_084145.1	ILMN_2744259	005490593	S	2708	CTAAGTATAAACAAAGGTTGGTCAGCTACCTGCAGAGACTGCAAATATGG	5	+	138543722-138543771	5qG2	Mus musculus zinc finger with KRAB and SCAN domains 1 (Zkscan1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C87323; 9230118B16Rik; 5930429A01Rik; 9130423L19Rik; KOX18; ZNF139; AI646829; PHZ-37; AI788588; MGC63357	C87323; 9230118B16Rik; 5930429A01Rik; 9130423L19Rik; KOX18; ZNF139; AI646829; PHZ-37; AI788588; MGC63357
Mus musculus	RefSeq	ILMN_188464	ILMN_224744	MBP	NM_001025254.2	NM_001025254.2		17196	95104792	NM_001025254.2	Mbp	NP_001020425.1	ILMN_1227299	002750601	S	272	CTCTGCCCTCTCATGCCCGCAGCCGTCCTGGGCTGTGCCACATGTACAAG	18	+	82731198-82731247	18qE3	Mus musculus myelin basic protein (Mbp), transcript variant 2, mRNA.	An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath [goid 33269] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]	mld; shi; R75289; C76307; golli-mbp; Hmbpr	mld; shi; R75289; C76307; golli-mbp; Hmbpr
Mus musculus	RefSeq	ILMN_213705	ILMN_224744	MBP	NM_001025254.2	NM_001025254.2		17196	95104792	NM_001025254.2	Mbp	NP_001020425.1	ILMN_2639865	006420364	S	508	GACTATAAATCGGCTCACAAGGGATTCAAGGGGGCCTACGACGCCCAGGG	18	+	82748376-82748425	18qE3	Mus musculus myelin basic protein (Mbp), transcript variant 2, mRNA.	An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath [goid 33269] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]	mld; shi; R75289; C76307; golli-mbp; Hmbpr	mld; shi; R75289; C76307; golli-mbp; Hmbpr
Mus musculus	RefSeq	ILMN_222407	ILMN_222407	LRRC4C	NM_178725.3	NM_178725.3		241568	32129227	NM_178725.3	Lrrc4c	NP_848840.2	ILMN_2826687	002470079	S	3309	GACCTGTTCTGTATTTATGAGGAGGACATTCTGTGGAGAAAGACAAAAAG	2	+	97432320-97432369	2qE1	Mus musculus leucine rich repeat containing 4C (Lrrc4c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]	Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA1580; 6430556C10Rik; NGL-1	mKIAA1580; 6430556C10Rik; NGL-1
Mus musculus	RefSeq	ILMN_215623	ILMN_215623	CCL25	NM_009138.2	NM_009138.2		20300	133892127	NM_009138.2	Ccl25	NP_033164.1	ILMN_2661722	001780307	S	427	TATGAAGTCCAAGGTGGAGAACCCCAACAGTACAAGCGTGAGGAGTGCCA	8	+	4357624-4357673	8qA1.1	Mus musculus chemokine (C-C motif) ligand 25 (Ccl25), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IDA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TECK; Scya25; AI852536; CKb15	TECK; Scya25; AI852536; CKb15
Mus musculus	RefSeq	ILMN_215758	ILMN_215758	2310045A20RIK	NM_172710.3	NM_172710.3		231238	154689956	NM_172710.3	2310045A20Rik	NP_766298.2	ILMN_2663281	006200348	S	4195	CTAGGAAATCTTTACCGTTTAAGTGTAGTCTGCTTCCCCATGAGTCACCA				5qC1	Mus musculus RIKEN cDNA 2310045A20 gene (2310045A20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI429585; mKIAA0746	AI429585; mKIAA0746
Mus musculus	RefSeq	ILMN_219226	ILMN_219226	DEFB4	NM_019728.3	NM_019728.3		56519	142379735	NM_019728.3	Defb4	NP_062702.1	ILMN_2705918	007000368	S	123	GACCAATGGAGCCATATGCTGGGGTCCGTGCCCTACCGCTTTTCGACAGA	8	+	19201214-19201263	8qA1.3	Mus musculus defensin beta 4 (Defb4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		MBD-4; 2310001F05Rik	MBD-4; 2310001F05Rik
Mus musculus	RefSeq	ILMN_186211	ILMN_186211	ZFP282	NM_146175.3	NM_146175.3		101095	114158688	NM_146175.3	Zfp282	NP_666287.3	ILMN_1256121	004810326	S	3635	CTGCTTTCCTCAGACCCTTTTTTGCCGTGCAAAGGGAATTCTTGAAATTA	6	+	47856897-47856946	6qB2.3	Mus musculus zinc finger protein 282 (Zfp282), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	E430019K09Rik; MGC36603; HUB1; C81429; AI449432	E430019K09Rik; MGC36603; HUB1; C81429; AI449432
Mus musculus	Riken	ILMN_207304	ILMN_207304	4732442E24RIK	ri|4732442E24|PX00637P07|AK076334|3328					AK076334	4732442E24Rik		ILMN_2586591	004670543	S	3178	GCAGCCAAGCCACCATTTACTATGCGATGTAACTTGCGCCGCTGCCCTCC										
Mus musculus	Riken	ILMN_207117	ILMN_207117	2610103J23RIK	ri|E130305A01|PX00675E10|AK087486|2486					AK087486	2610103J23Rik		ILMN_2585167	003370053	S	2199	TATTGCAGTCTAAGTAAGGAGAAGCAAACAAAGGCACTATCTGGGAAGGC										
Mus musculus	RefSeq	ILMN_187306	ILMN_187306	ZSCAN12	NM_016684.2	NM_016684.2		22758	134032036	NM_016684.2	Zscan12	NP_057893.2	ILMN_1246450	002690014	S	1825	TGATGACTACAGGGAAGCTACCTCACGGTGTCGGCTGATGAAGAGTATTG	13	+	21461578-21461627	13qA3.1	Mus musculus zinc finger and SCAN domain containing 12 (Zscan12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfp96; mKIAA0426; 2510038J07Rik; FPM315	Zfp96; mKIAA0426; 2510038J07Rik; FPM315
Mus musculus	RefSeq	ILMN_218084	ILMN_218084	POLR3D	NM_025945.2	NM_025945.2		67065	31981108	NM_025945.2	Polr3d	NP_080221.2	ILMN_1215692	004040592	S	1581	TCTCCCAGAGTAGAATGGGGCAGGCTTCTTTTTGGGGAGCCGTGGGCTAC	14	-	70838949-70838998	14qD2	Mus musculus polymerase (RNA) III (DNA directed) polypeptide D (Polr3d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5666] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	BN51T; 44kDa; TSBN51; AI326118; RPC4; 2810426M17Rik; AW489084	BN51T; 44kDa; TSBN51; AI326118; RPC4; 2810426M17Rik; AW489084
Mus musculus	RefSeq	ILMN_218084	ILMN_218084	POLR3D	NM_025945.2	NM_025945.2		67065	31981108	NM_025945.2	Polr3d	NP_080221.2	ILMN_1230721	003420100	S	539	TCAAAAAAGAGAAGAGAGAAACAGACGAAGAGACCAAGCAGATCCTGCGC	14	-	70840861-70840910	14qD2	Mus musculus polymerase (RNA) III (DNA directed) polypeptide D (Polr3d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5666] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	BN51T; 44kDa; TSBN51; AI326118; RPC4; 2810426M17Rik; AW489084	BN51T; 44kDa; TSBN51; AI326118; RPC4; 2810426M17Rik; AW489084
Mus musculus	RefSeq	ILMN_201382	ILMN_324068	LOC100046946	XR_033543.1	XR_033543.1		100046946	149263669	XR_033543.1	LOC100046946		ILMN_1213857	004810114	S	459	CAGGATGCCAAGAGGCTGTACTACACAAAGGCCATTGCTCTCAACTTCAT					PREDICTED: Mus musculus similar to serine (or cysteine) proteinase inhibitor, clade A, member 1c (LOC100046946), misc RNA.					
Mus musculus	RefSeq	ILMN_214215	ILMN_229928	PARP6	NM_029922.2	NM_029922.2		67287	112807188	NM_029922.2	Parp6	NP_084198.2	ILMN_2768073	003120544	S	2536	CCAGGAACTACTCCACATTTGGATGGCCCTGACTGACTCCCACCCCTGAT	9	+	59497979-59498028	9qB	Mus musculus poly (ADP-ribose) polymerase family, member 6 (Parp6), mRNA. XM_917769 XM_925210 XM_925215 XM_925220 XM_925235 XM_977183	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]	C030013N01Rik; 3110038K10Rik; 2310028P13Rik; 1700119G14Rik	C030013N01Rik; 3110038K10Rik; 2310028P13Rik; 1700119G14Rik
Mus musculus	MEEBO	ILMN_212696	ILMN_212696	4732486I23RIK	scl099003.2_10	XM_130565.3			38075003	XM_130565.3	4732486I23Rik		ILMN_2629307	003800102	S	8347	TTCAAATGAGTGGTTGAAGAAAGGGTCTCCTTCCCGTTTCCTCACAGTCC										
Mus musculus	RefSeq	ILMN_213269	ILMN_213269	D930038D03RIK	NM_177142.2	NM_177142.2		320355	31342899	NM_177142.2	D930038D03Rik	NP_796116.1	ILMN_2635416	004260487	S	1222	GTGGATATGTAAAAAGCACAGCTCCTACGGGAAATGGGAAGTTTAGTGCT	16	-	75423414-75423463	16qC3.1	Mus musculus RIKEN cDNA D930038D03 gene (D930038D03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220875	ILMN_222476	ARHGAP24	NM_029270.1	NM_029270.1		231532	30840989	NM_029270.1	Arhgap24	NP_083546.1	ILMN_2728038	006550470	S	2808	CAGGTGTGGGATCAGGTGGTTGGTCTGTGTAGAGCTTCATCTGGTGCAGG	5	+	103326418-103326467	5qE5	Mus musculus Rho GTPase activating protein 24 (Arhgap24), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610025G21Rik; MGC38749	0610025G21Rik; MGC38749
Mus musculus	RefSeq	ILMN_222476	ILMN_222476	ARHGAP24	NM_029270.1	NM_029270.1		231532	30840989	NM_029270.1	Arhgap24	NP_083546.1	ILMN_2750062	003800528	S	583	TCAAGACTTGGCACACCCGGTGGTTTGTGCTTAAGGGGGATCAGCTTTAT	5	+	102981255-102981304	5qE5	Mus musculus Rho GTPase activating protein 24 (Arhgap24), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610025G21Rik; MGC38749	0610025G21Rik; MGC38749
Mus musculus	RefSeq	ILMN_189396	ILMN_260859	4631424J17RIK	XM_896131.2	XM_896131.2		70802	94390037	XM_896131.2	4631424J17Rik	XP_901224.1	ILMN_2460900	006900435	S	3504	CTAAATACATAGTATGAAACCCCTTAATTTTTCTTGTTTAATGAATGGAG	11	+	43564685-43564734	11qB1.1	PREDICTED: Mus musculus RIKEN cDNA 4631424J17 gene, transcript variant 6 (4631424J17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188349	ILMN_260859	4631424J17RIK	XM_896131.2	XM_896131.2		70802	94390037	XM_896131.2	4631424J17Rik	XP_901224.1	ILMN_1256888	004560341	S	3898	CCCAGAGCATTTCCTAATCCTGAGCAATGGGCTGTTGGGTACTCTCACCC	11	+	43565079-43565128	11qB1.1	PREDICTED: Mus musculus RIKEN cDNA 4631424J17 gene, transcript variant 6 (4631424J17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215251	ILMN_215251	A730008H23RIK	NM_172505.1	NM_172505.1		212427	27369699	NM_172505.1	A730008H23Rik	NP_766093.1	ILMN_1232341	004610328	S	2068	CACAGCATCATCTCTGTCCTTTCTTGTGGGATGTTGGTACCTTGGGCTTC	Un	-	485-534		Mus musculus RIKEN cDNA A730008H23 gene (A730008H23Rik), mRNA.				MGC117857	MGC117857
Mus musculus	Riken	ILMN_202798	ILMN_202798	4930465J06RIK	ri|4930465J06|PX00032B19|AK029681|3083					AK029681	4930465J06Rik		ILMN_2552380	004480678	S	2013	CTGGGAACCCCTGAGATGCACAATGTTTCTTCAGCAGCTTCCAAAGGAGC										
Mus musculus	MEEBO	ILMN_186189	ILMN_186189	SCL000554.1_19	scl000554.1_19						scl000554.1_19		ILMN_1230845	000580139	S	6	ATGCCTGTTGAGCCCCGGCAGCCCGTGCAGCCCGTGCAGCCCATCGCTGG										
Mus musculus	MEEBO	ILMN_196190	ILMN_196190	YBX2	scl41354.10.1_7	NM_016875.1			8393790	NM_016875.1	Ybx2		ILMN_1241788	007400167	S	20	CCCCCCCACCACCATACTGGAGTGATTCCAACTCAGAGGACACCCAGAGC						A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IDA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules [goid 48255] [evidence IMP]; Any process that stops or reduces the rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51100] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with a lipid [goid 8289] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with any complex of RNA and protein [goid 43021] [evidence IDA]		
Mus musculus	RefSeq	ILMN_193991	ILMN_244616	TBC1D20	NM_024196.3	NM_024196.3		67231	146135006	NM_024196.3	Tbc1d20	NP_077158.1	ILMN_1226035	005960438	S	1804	CACCAGGATGATGTTGCCCGTGTCTCCCTGTTCTTTCTCCTCTACAAGCC				2qG3	Mus musculus TBC1 domain family, member 20 (Tbc1d20), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AI414693; 2810442O16Rik; 1110028I04Rik	AI414693; 2810442O16Rik; 1110028I04Rik
Mus musculus	MEEBO	ILMN_223855	ILMN_223855	RGS19IP3	scl0209047.3_12				22507362	NM_148951	Rgs19ip3		ILMN_2770482	005890066	S	593	CTGTGGAATCTAAAGTGATCAGCGGGAGGGAAACATTACGCCTGCGCTCA										
Mus musculus	Riken	ILMN_205258	ILMN_205258	MRPL3	ri|E230026B07|PX00210N17|AK054185|1745					AK054185	Mrpl3		ILMN_2571191	006450019	S	916	GTGTAGACCAGATAGACTGAGGTAAAGCCTGGGCGCTTCCGAGGATCTGC						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_209376	ILMN_209376	SLC26A4	NM_011867.3	NM_011867.3		23985	146134337	NM_011867.3	Slc26a4	NP_035997.1	ILMN_1220193	006330279	S	2781	GCCCTGAGAATTAGCAATGTTCGGATGTGCTGCAGTGACTCACTATGTGC				12qA3	Mus musculus solute carrier family 26, member 4 (Slc26a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence ISS]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence ISS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	pendrin; Pds	pendrin; Pds
Mus musculus	MEEBO	ILMN_188141	ILMN_188141	BC038167	scl37041.7.1_1				51764821	XM_196478	BC038167		ILMN_2450117	003610240	S	9	GGGTGTTCACAGGACAACCTGGACTGTCTACTGGCCAAGCTGAGAGTGGT										
Mus musculus	Riken	ILMN_201674	ILMN_201674	1810009H17RIK	ri|1810009H17|R000022O09|AK007402|874					AK007402	1810009H17Rik		ILMN_2543672	001340162	S	620	TAAGTATTGAAGCATCTGGCATACCTTACCTTTATAAGACGGGTGATTCC										
Mus musculus	Riken	ILMN_203168	ILMN_203168	9230114N12RIK	ri|9230114N12|PX00062G03|AK033817|2384					AK033817	9230114N12Rik		ILMN_1255307	002030121	S	2012	CCAGGAGAGGACACTGGTAAAGCGAAGAAACCCCAGTTGCAGTGATGGCC										
Mus musculus	MEEBO	ILMN_194599	ILMN_194599	ABCE1	scl34605.21_672				7657517	NM_015751	Abce1		ILMN_2726182	001940332	S	3189	CCATTGCTGCAGTGCAATCCTATTTGTTGGAATCAAAGGACATTATCCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223725	ILMN_223725	OLFR1501	NM_146633.2	NM_146633.2		258626	110671327	NM_146633.2	Olfr1501	NP_666844.1	ILMN_2803864	006980719	S	542	CACCCCTGCTGAAGCTTTCCTGTAGTGAGACTAAGTTACGCGAACAGGTC	19	-	13913070-13913119	19qA	Mus musculus olfactory receptor 1501 (Olfr1501), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR212-3	MOR212-3
Mus musculus	Riken	ILMN_207307	ILMN_207307	4833440I11RIK	ri|4833440I11|PX00638D04|AK076523|2051					AK076523	4833440I11Rik		ILMN_2586614	004540528	S	1767	GATCTTGACATTTGATCTTGGGGATACTTACAGGCACTTTTACCGTAGCC										
Mus musculus	RefSeq	ILMN_241050	ILMN_241050	SLC22A14	NM_001037749.1	NM_001037749.1		382113	83627688	NM_001037749.1	Slc22a14	NP_001032838.1	ILMN_2874193	003830538	S	1899	CCACGCTCAATGCCGTGACTTTCAAGCCAGAAGAAAATAGCCTCCTCAAC	9	-	119018403-119018452	9qF3	Mus musculus solute carrier family 22 (organic cation transporter), member 14 (Slc22a14), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC118292; Gm1128	MGC118292; Gm1128
Mus musculus	RefSeq	ILMN_199249	ILMN_315074	EG382161	XM_001477831.1	XM_001477831.1		382161	149268987	XM_001477831.1	EG382161	XP_001477881.1	ILMN_1218324	006450017	S	1749	ATGTAACCAGTGTGGTAAAACCTTTGCACGACACAGTCAGCTTCAAACAC				17qA3.1	PREDICTED: Mus musculus predicted gene, EG382161 (EG382161), mRNA.					
Mus musculus	RefSeq	ILMN_200241	ILMN_200241	LOC386054	XM_359045.1	XM_359045.1			38081055	XM_359045.1	LOC386054		ILMN_1238117	005570139	S	999	CCACGACAAAAACAAATTCACACAATATCTTACCACGAATCCAGCCCTTC										
Mus musculus	Riken	ILMN_206457	ILMN_206457	MSI1H	ri|D130076N11|PX00186M13|AK084019|2638					AK084019	Msi1h		ILMN_1251865	001510180	S	2332	GGCCGGTTACAAAAAGGAGAATCCAAGCCTCAGACGCCACAGTGTCACGG										
Mus musculus	RefSeq	ILMN_189931	ILMN_189931	ZFP59	NM_011762.3	NM_011762.3		22717	124269714	NM_011762.3	Zfp59	NP_035892.2	ILMN_2939348	000110072	S	694	GCAGGTCAACTCTTACTCAGCATCAGAGTGTTCACACTGGAGAGAAGCCC	7	+	28638691-28638740	7qA3	Mus musculus zinc finger protein 59 (Zfp59), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Mfg-2; Mfg2	Mfg-2; Mfg2
Mus musculus	RefSeq	ILMN_218505	ILMN_235842	OLFR1202	NM_146462.1	NM_146462.1		258454	33239029	NM_146462.1	Olfr1202	NP_666673.1	ILMN_2696660	000270133	S	630	CCTACTGCTTGTCTCCTACCTGGTCATTCTTAACTCCCTAAGGAGCCACA	2	+	88657959-88658008	2qE1	Mus musculus olfactory receptor 1202 (Olfr1202), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR232-7	MOR232-7
Mus musculus	MEEBO	ILMN_191702	ILMN_191702	D230050P06	scl0330916.3_15						D230050P06		ILMN_2481426	002480689	S	7	CAGCAAAGACCTCTTTATCCACTCTGGGATGAGACAGCCACTCAGGAAGT										
Mus musculus	RefSeq	ILMN_200664	ILMN_200664	LOC381801	XM_355803.1	XM_355803.1			38084987	XM_355803.1	LOC381801		ILMN_2539564	002690634	S	2726	GGATCATTGTGGAAACAGACGCACCCTACTTTCTCCCTCGCCAGGTGCCG										
Mus musculus	MEEBO	ILMN_187044	ILMN_187044	D1ERTD471E	scl027877.2_206						D1Ertd471e		ILMN_2440679	005340612	S	16	GAGTCGGGTGCAAAGATGCCTACTTCATGAGAATCACCTGCCCAGTTGTT										
Mus musculus	RefSeq	ILMN_190955	ILMN_226111	TUSC1	NM_026954.1	NM_026954.1		69136	51890206	NM_026954.1	Tusc1	NP_081230.1	ILMN_1217068	001580075	S	1293	GGCCTCCAGAGATCTTTTTAGAGTATCTTCTGACAGGTGATGATTTGAGC	4	-	93000860-93000909	4qC5	Mus musculus tumor suppressor candidate 1 (Tusc1), mRNA.				TSG-9; 2200001D17Rik	TSG-9; 2200001D17Rik
Mus musculus	RefSeq	ILMN_226111	ILMN_226111	TUSC1	NM_026954.1	NM_026954.1		69136	51890206	NM_026954.1	Tusc1	NP_081230.1	ILMN_3122885	007000437	A	552	TAGAGAAGCTGGAGGTCATGTACCGCCGAGCGCTCCTGCAGCTGCACCTA	4	-	93001601-93001650	4qC5	Mus musculus tumor suppressor candidate 1 (Tusc1), mRNA.				TSG-9; 2200001D17Rik	TSG-9; 2200001D17Rik
Mus musculus	Riken	ILMN_204272	ILMN_204272	CALN1	ri|9630012C17|PX00115A14|AK035865|1261					AK035865	Caln1		ILMN_1231273	005290398	S	263	ACAAAGGGGGACCAAGAAACCCCCGAAAGGGGAGAGGAGCCACGGAGAAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISA]		
Mus musculus	RefSeq	ILMN_188853	ILMN_316844	FLG	XM_001481265.1	XM_001481265.1		14246	149251593	XM_001481265.1	Flg	XP_001481315.1	ILMN_2456327	000060711	S	759	GAGGGAAACAGAAGACCCAGAGCAGACTCCCAGAAGGAACCCCAGTCATC				3qF2.1	PREDICTED: Mus musculus filaggrin (Flg), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence TAS]			
Mus musculus	MEEBO	ILMN_221925	ILMN_221925	SEC22L2	scl48518.8_338	NM_133704.3			31559773	NM_133704.3	Sec22l2		ILMN_1215824	000450619	S	3655	GCTAGGGTCAGAAGGGAGCAAGTTAGACAGGGCTCTGTCAAAGATGAAAC										
Mus musculus	RefSeq	ILMN_191139	ILMN_243740	CPM	XM_994613.1	XM_994613.1		70574	94388683	XM_994613.1	Cpm	XP_999707.1	ILMN_2476452	003420600	S	5133	AACCTTAAGCTCACAAGCCAACCCACAGCTCTGTGCGAGAGACTTCATGC	10	+	117124029-117124078	10qD2	PREDICTED: Mus musculus carboxypeptidase M (Cpm), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212685	ILMN_243740	CPM	XM_994613.1	XM_994613.1		70574	94388683	XM_994613.1	Cpm	XP_999707.1	ILMN_2629191	005360181	S	3052	GGGGAAGTGTCTCAGCTACCGCTACAGACCTTTCCAGAACGCTAAGGATC	10	+	117121948-117121997	10qD2	PREDICTED: Mus musculus carboxypeptidase M (Cpm), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184644	ILMN_184644	9629514_325	9629514_325						9629514_325		ILMN_2420341	001170240	S	19	CCTTATTTGAATTAACCAATCAGCCTGCTTCTCGCTTCTGTTCGCGCGCT										
Mus musculus	RefSeq	ILMN_198644	ILMN_236918	GM581	XM_923359.3	XM_923359.3		210541	149257129	XM_923359.3	Gm581	XP_928452.2	ILMN_1256038	005870753	S	524	AACCAGTCTTGCACCTCGATGCCCCGAAGGACCCGCTGGATCTCTACTTC				7qB4	PREDICTED: Mus musculus gene model 581, (NCBI) (Gm581), mRNA.					
Mus musculus	MEEBO	ILMN_195491	ILMN_195491	TRPV5	scl29083.15.1_50				51711942	XM_112633	Trpv5		ILMN_1252742	003290059	S	16	CCATCTCCTTACCCTTCTAGGGACTCTCTTCCCAGCTAGCAAATCCCATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence NAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212228	ILMN_212228	RIC3	NM_178780.3	NM_178780.3		320360	84490398	NM_178780.3	Ric3	NP_848895.2	ILMN_1216534	000270541	S	1596	GTGTGCCTCACCTGTGCACAGCAGCAGGAGTTTTCATGCATCTTGGATAC	7	-	116190521-116190570	7qE3	Mus musculus resistance to inhibitors of cholinesterase 3 homolog (C. elegans) (Ric3), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			E130307J04Rik	E130307J04Rik
Mus musculus	RefSeq	ILMN_212228	ILMN_212228	RIC3	NM_178780.3	NM_178780.3		320360	84490398	NM_178780.3	Ric3	NP_848895.2	ILMN_2624193	004050554	S	505	CAGAAGAAGCCATGGAAAAATTAATCAACAGAGTTGGACCTAATGGTGAG	7	-	116197880-116197929	7qE3	Mus musculus resistance to inhibitors of cholinesterase 3 homolog (C. elegans) (Ric3), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			E130307J04Rik	E130307J04Rik
Mus musculus	RefSeq	ILMN_209931	ILMN_209931	WIPI1	NM_145940.2	NM_145940.2		52639	118130229	NM_145940.2	Wipi1	NP_666052.1	ILMN_1216091	005550601	S	700	GCACTGTCATCCGAGTGTTCTCTGTTCCCGAGGGCCAGAAACTCTATGAG	11	-	109444460-109444509	11qE1	Mus musculus WD repeat domain, phosphoinositide interacting 1 (Wipi1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A punctate structure localized in the vicinity of the vacuole that is required for the formation of autophagosomes [goid 407] [evidence ISO]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]	MGC36416; AW411817; D11Ertd498e; 4930533H01Rik	MGC36416; AW411817; D11Ertd498e; 4930533H01Rik
Mus musculus	RefSeq	ILMN_209931	ILMN_209931	WIPI1	NM_145940.2	NM_145940.2		52639	118130229	NM_145940.2	Wipi1	NP_666052.1	ILMN_1236411	000060598	S	1430	CCTCAGAAGTCAGGACACTCCCCTGTCAGGTGGTTTTGGAGAGAACGAGG	11	-	109435172-109435221	11qE1	Mus musculus WD repeat domain, phosphoinositide interacting 1 (Wipi1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A punctate structure localized in the vicinity of the vacuole that is required for the formation of autophagosomes [goid 407] [evidence ISO]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]	MGC36416; AW411817; D11Ertd498e; 4930533H01Rik	MGC36416; AW411817; D11Ertd498e; 4930533H01Rik
Mus musculus	RefSeq	ILMN_209931	ILMN_209931	WIPI1	NM_145940.2	NM_145940.2		52639	118130229	NM_145940.2	Wipi1	NP_666052.1	ILMN_2834677	001030523	S	1617	TTGAGCCATAGACCGCAGTTAGCCCCCCGACCCAAGCCCCTCAGCCTTGA	11	-	109434985-109435034	11qE1	Mus musculus WD repeat domain, phosphoinositide interacting 1 (Wipi1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A punctate structure localized in the vicinity of the vacuole that is required for the formation of autophagosomes [goid 407] [evidence ISO]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]	MGC36416; AW411817; D11Ertd498e; 4930533H01Rik	MGC36416; AW411817; D11Ertd498e; 4930533H01Rik
Mus musculus	RefSeq	ILMN_226460	ILMN_226460	BC085271	NM_001008551.1	NM_001008551.1		434632	56606036	NM_001008551.1	BC085271	NP_001008551.1	ILMN_2960822	006960563	S	732	GCCAGAGAGCTTCTTTTCCTGGTTTACAGACCATTCTGACGCAGGTGCTA	1|NT_165754.2	-	168706-168755		Mus musculus cDNA sequence BC085271 (BC085271), mRNA.				MGC103372	MGC103372
Mus musculus	Riken	ILMN_206762	ILMN_206762	D930012N15RIK	ri|D930012N15|PX00201H20|AK086200|2861					AK086200	D930012N15Rik		ILMN_2582518	002760307	S	2805	CTCCTGTCTGTTTCCCAAGAACTGGGATTACAGGCATGCACCACTTTCTC										
Mus musculus	RefSeq	ILMN_217757	ILMN_217757	ID3	NM_008321.1	NM_008321.1		15903	6680340	NM_008321.1	Id3	NP_032347.1	ILMN_2687169	000110471	S	699	ACTGGCTTTTCCGAGAATGGGGTGTCGAGAGGGTGTGGGGGGATGCGAGT	4	+	135701053-135701102	4qD3	Mus musculus inhibitor of DNA binding 3 (Id3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	HLH462; Idb3	HLH462; Idb3
Mus musculus	RefSeq	ILMN_199480	ILMN_199480	LOC383555	XM_357120.1	XM_357120.1			38050469	XM_357120.1	LOC383555		ILMN_1239044	005420326	S	99	TTGCAGGGAAGCCAGCAGGCAGGAGTGTGGGACTTGGAGAAATCGCCTAG										
Mus musculus	RefSeq	ILMN_187921	ILMN_187921	GZF1	NM_028986.1	NM_028986.1		74533	37674206	NM_028986.1	Gzf1	NP_083262.1	ILMN_3007956	000840358	S	3765	AGGAGCTGGCGAGGCCACCAAAAGGGGTTCCAGGTGCTGGTAATGTTTCC	2	+	148384064-148384113	2qG3	Mus musculus GDNF-inducible zinc finger protein 1 (Gzf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mGZF1; Zfp336; 8430437G08Rik	mGZF1; Zfp336; 8430437G08Rik
Mus musculus	RefSeq	ILMN_187921	ILMN_187921	GZF1	NM_028986.1	NM_028986.1		74533	37674206	NM_028986.1	Gzf1	NP_083262.1	ILMN_3007959	006840451	S	3911	GTGATTGGCATATGACCATTTTATCTGGTAAGAGAAAACCTGCCCAGCTG	2	+	148384210-148384259	2qG3	Mus musculus GDNF-inducible zinc finger protein 1 (Gzf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mGZF1; Zfp336; 8430437G08Rik	mGZF1; Zfp336; 8430437G08Rik
Mus musculus	RefSeq	ILMN_213405	ILMN_213405	BCAN	NM_007529.1	NM_007529.1		12032	6671617	NM_007529.1	Bcan	NP_031555.1	ILMN_2670486	006980561	S	2297	GGGAGTACCAGTGGATTGGGCTCAATGACAGGACCATCGAGGGTGACTTC	3	-	87793111-87793160	3qF1	Mus musculus brevican (Bcan), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Cspg7	Cspg7
Mus musculus	RefSeq	ILMN_213405	ILMN_213405	BCAN	NM_007529.1	NM_007529.1		12032	6671617	NM_007529.1	Bcan	NP_031555.1	ILMN_2636745	002030044	S	2736	AGAAGGACCACGGGGACAGCTCTCGAGGCACAGGAAGGCACCGTTGACAC	3	-	87791808-87791857	3qF1	Mus musculus brevican (Bcan), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Cspg7	Cspg7
Mus musculus	RefSeq	ILMN_213405	ILMN_213405	BCAN	NM_007529.1	NM_007529.1		12032	6671617	NM_007529.1	Bcan	NP_031555.1	ILMN_2995619	006550315	S	3067	CGATCTTGATTGTCGAAGAGTTTTTAGGATGGAGTACCAGCAAAACCAGG	3	-	87791477-87791526	3qF1	Mus musculus brevican (Bcan), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Cspg7	Cspg7
Mus musculus	RefSeq	ILMN_220406	ILMN_220406	CALCB	NM_054084.1	NM_054084.1		116903	16930814	NM_054084.1	Calcb	NP_473425.1	ILMN_1252436	005340707	S	591	GCTTGCATCCTGATAGATAATGAGGGAAACCACCGTTGTTACTTGAGAGG	7	+	121866502-121866551	7qF1	Mus musculus calcitonin-related polypeptide, beta (Calcb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	CGRP2; MGC130530; Calc2	CGRP2; MGC130530; Calc2
Mus musculus	RefSeq	ILMN_208692	ILMN_208692	OLFR826	NM_146676.1	NM_146676.1		258671	33239099	NM_146676.1	Olfr826	NP_666887.1	ILMN_2588637	001570349	S	554	GACCAGTTCAGAGATTATCTTGTAATAATCTTTTTGTCCATAAAATAGTA	10	-	129617331-129617380	10qD3	Mus musculus olfactory receptor 826 (Olfr826), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR210-2	MOR210-2
Mus musculus	RefSeq	ILMN_211721	ILMN_211721	SLC2A10	NM_130451.2	NM_130451.2		170441	133893061	NM_130451.2	Slc2a10	NP_569718.1	ILMN_1243491	004900682	S	2660	GGGGGCGTTGTAAAGGTCAGTCAACTGGAGACAAGCAAGAGCCTCAGGTC	2	+	165344720-165344769	2qH3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 10 (Slc2a10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence ISO]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence ISO]	Glut10; AA450473	Glut10; AA450473
Mus musculus	RefSeq	ILMN_212090	ILMN_212090	SRR	NM_013761.2	NM_013761.2		27364	31543771	NM_013761.2	Srr	NP_038789.1	ILMN_2622605	003800491	S	3075	TGTGAGATGACTGCTTCTGTGCTGGGTGTAGGAGAGTAAGCTAGTAGGGA	11	-	74723033-74723082	11qB5	Mus musculus serine racemase (Srr), mRNA.		The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine [goid 9069] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the synthesis of free D-serine from L-serine [goid 30378] [evidence IDA]; Catalysis of the reaction: L-threonine = D-threonine [goid 18114] [evidence IDA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	Srs	Srs
Mus musculus	RefSeq	ILMN_217009	ILMN_217009	AFM	NM_145146.2	NM_145146.2		280662	125347463	NM_145146.2	Afm	NP_660128.2	ILMN_2678063	005890706	S	1953	GAAGGTTTTTCCGTAACCCTTTCTTGAATCATGTTCCTACAAAAGGCAAT	5	+	90982501-90982550	5qE1	Mus musculus afamin (Afm), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC118711; Alf; alpha-Alb	MGC118711; Alf; alpha-Alb
Mus musculus	RefSeq	ILMN_200772	ILMN_200772	CEACAM3	XM_357710.6	XM_357710.6		384557	149256541	XM_357710.6	Ceacam3	XP_357710.5	ILMN_2539947	001070129	S	1918	GCTGACACTGGAATCTCCACCCAGTGGCTCTTCAACAACCAGAATCTGCG	7	+	17748377-17748426	7qA2	PREDICTED: Mus musculus carcinoembryonic antigen-related cell adhesion molecule 3 (Ceacam3), mRNA.					
Mus musculus	RefSeq	ILMN_184686	ILMN_310063	LOC100039649	XM_001473263.1	XM_001473263.1		100039649	149258258	XM_001473263.1	LOC100039649	XP_001473313.1	ILMN_1221082	002680068	S	700	AATGTGAGAGGCTGCTGACCTCCGCAGCCTTCGAGGACTGCCAGACCCGC	7	+	148879478-148879527	7qF5	PREDICTED: Mus musculus similar to secreted gel-forming mucin (LOC100039649), mRNA.					
Mus musculus	RefSeq	ILMN_184686	ILMN_310063	LOC100039649	XM_001473263.1	XM_001473263.1		100039649	149258258	XM_001473263.1	LOC100039649	XP_001473313.1	ILMN_1215436	001710497	S	3245	CTACAACCCCCCGGACGAGTGTGAATGGCACTATGAACCCTGTGGGAACC	7	+	148886719-148886768	7qF5	PREDICTED: Mus musculus similar to secreted gel-forming mucin (LOC100039649), mRNA.					
Mus musculus	MEEBO	ILMN_195269	ILMN_195269	AI875142	scl39409.1_209						AI875142		ILMN_1256967	006100674	S	12	AGGGGCTGATCCACTGCTCGTTTGGTTACTGGGCAGGTGAGGTAGACATG										
Mus musculus	RefSeq	ILMN_198889	ILMN_198889	LOC380623	XM_358377.1	XM_358377.1			38089426	XM_358377.1	LOC380623		ILMN_1258466	005820504	S	937	CACGTTCGCTGCTTATGGTGCAGCCGGAACTCATCCGTGACAGCCTTGTA										
Mus musculus	RefSeq	ILMN_250562	ILMN_250562	GM106	NM_001033288.1	NM_001033288.1		226866	85701801	NM_001033288.1	Gm106	NP_001028460.1	ILMN_2802928	000770209	S	2510	CGGTAGCTCCAGGATGTTTGGTCGGGCACTCTGAGGCATAAGTAACCACT	1	-	15839264-15839313	1qA3	Mus musculus gene model 106, (NCBI) (Gm106), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_214401	ILMN_214401	ATM	NM_007499.1	NM_007499.1		11920	6680739	NM_007499.1	Atm	NP_031525.1	ILMN_2647620	007330671	S	3818	CCCACATTTGGTAATCAGAAGCCATTTTGATGAGGTGAAGTCCATTGCTA	9	-	53301318-53301367	9qA5.3	Mus musculus ataxia telangiectasia mutated homolog (human) (Atm), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IGI]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42159] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence TAS]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence TAS]	C030026E19Rik; AI256621	C030026E19Rik; AI256621
Mus musculus	RefSeq	ILMN_214401	ILMN_214401	ATM	NM_007499.1	NM_007499.1		11920	6680739	NM_007499.1	Atm	NP_031525.1	ILMN_2783896	004560551	S	9239	GTGACCTTCACCCTTAAACTCGAACTTCAGAAATGACATCTCACCCACCA	9	-	53247804-53247850:53247851-53247853	9qA5.3	Mus musculus ataxia telangiectasia mutated homolog (human) (Atm), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IGI]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42159] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence TAS]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence TAS]	C030026E19Rik; AI256621	C030026E19Rik; AI256621
Mus musculus	RefSeq	ILMN_214401	ILMN_214401	ATM	NM_007499.1	NM_007499.1		11920	6680739	NM_007499.1	Atm	NP_031525.1	ILMN_1258206	006280605	S	9402	CTCAAGATCCATTCGTAGGATACGTGCTGACTCTTAGGTCATGCTTGTGC	9	-	53247641-53247690	9qA5.3	Mus musculus ataxia telangiectasia mutated homolog (human) (Atm), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IGI]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42159] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence TAS]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence TAS]	C030026E19Rik; AI256621	C030026E19Rik; AI256621
Mus musculus	RefSeq	ILMN_212033	ILMN_212033	BC011248	NM_144857.1	NM_144857.1		224823	21450074	NM_144857.1	BC011248	NP_659106.1	ILMN_2998479	003840379	S	993	GCAGGGGCTTCAGAAGAGCCACTTTGGAAACAAGTCTGTTTCTCCTTGTT	17	-	46804559-46804608	17qC	Mus musculus cDNA sequence BC011248 (BC011248), mRNA.				MGC19067	MGC19067
Mus musculus	RefSeq	ILMN_212033	ILMN_212033	BC011248	NM_144857.1	NM_144857.1		224823	21450074	NM_144857.1	BC011248	NP_659106.1	ILMN_1232115	006450192	S	506	TTGAAGCAGGAGCGCCGGGCTCAGGCACAGCAGGGCCATCGGCCATACTT	17	-	46806864-46806913	17qC	Mus musculus cDNA sequence BC011248 (BC011248), mRNA.				MGC19067	MGC19067
Mus musculus	RefSeq	ILMN_202576	ILMN_245055	DDRGK1	NM_029832.2	NM_029832.2		77006	141802963	NM_029832.2	Ddrgk1	NP_084108.1	ILMN_1213244	000940348	S	468	CAGGCTCGAAAGGCTCAGCGAGAGGCAGAGGAGGCTGAACGTGAAGAACG	2	-	130487548-130487574:130487813-130487835	2qF1	Mus musculus DDRGK domain containing 1 (Ddrgk1), mRNA. XM_925578 XM_925581 XM_925583 XM_994018 XM_994040 XM_994059 XM_994077	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			RP23-100C5.9; AI326138; 1110001I20Rik	RP23-100C5.9; AI326138; 1110001I20Rik
Mus musculus	RefSeq	ILMN_211432	ILMN_245055	DDRGK1	NM_029832.2	NM_029832.2		77006	141802963	NM_029832.2	Ddrgk1	NP_084108.1	ILMN_2615854	006660398	S	1043	TGAGTGTATCCTGTGGCCTACATGTGTCTTCATCCTTCCCTAATGCCGTC	2	-	130479827-130479876	2qF1	Mus musculus DDRGK domain containing 1 (Ddrgk1), mRNA. XM_925578 XM_925581 XM_925583 XM_994018 XM_994040 XM_994059 XM_994077	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			RP23-100C5.9; AI326138; 1110001I20Rik	RP23-100C5.9; AI326138; 1110001I20Rik
Mus musculus	RefSeq	ILMN_193661	ILMN_252279	CKB	NM_021273.3	NM_021273.3		12709	118131180	NM_021273.3	Ckb	NP_067248.1	ILMN_1224754	004920487	S	1292	CTGAGCCCTTAGCCTCGCTGTAGAGACTTCTGTCGCCCTGGGTAGAGTTT	12	-	112907632-112907681	12qF1	Mus musculus creatine kinase, brain (Ckb), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + creatine = ADP + phosphocreatine [goid 4111] [evidence IEA]	B-CK; Ck-3	B-CK; Ck-3
Mus musculus	RefSeq	ILMN_213206	ILMN_213206	S100B	NM_009115.2	NM_009115.2		20203	54262155	NM_009115.2	S100b	NP_033141.1	ILMN_2634742	005310184	S	195	GCTGAAGAAGTCAGAACTGAAGGAGCTTATCAACAACGAGCTCTCTCACT	10	+	75714841-75714890	10qC1	Mus musculus S100 protein, beta polypeptide, neural (S100b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	 [goid 6112] [evidence NAS]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence NAS]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence NAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42035] [evidence NAS]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence NAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]	AI850290; MGC74317; Bpb	AI850290; MGC74317; Bpb
Mus musculus	RefSeq	ILMN_209117	ILMN_209117	IFNGR2	NM_008338.3	NM_008338.3		15980	133892283	NM_008338.3	Ifngr2	NP_032364.1	ILMN_1258300	006760088	S	1025	CTTCTCCAGAAAAGGAGCGAGATGATGTGCTCCAAACACCGTGAACCAGG	16	+	91563207-91563250:91563251-91563256	16qC3.3	Mus musculus interferon gamma receptor 2 (Ifngr2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ifgr2; Ifgt	Ifgr2; Ifgt
Mus musculus	RefSeq	ILMN_220158	ILMN_220158	CISH	NM_009895.3	NM_009895.3		12700	118129844	NM_009895.3	Cish	NP_034025.1	ILMN_2718330	004200017	S	1962	GATGCTTATCCAAGGGCCGCAGATGTAGCTCCCTTGTGTCCGTTTCCTGC	9	+	107204093-107204142	9qF1	Mus musculus cytokine inducible SH2-containing protein (Cish), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CIS1; F23; Cis; AI385595; F17	CIS1; F23; Cis; AI385595; F17
Mus musculus	RefSeq	ILMN_196976	ILMN_196976	LOC236356	XM_142894.2	XM_142894.2			38050507	XM_142894.2	LOC236356		ILMN_1215627	001990136	S	896	GCCAGTCACAGCTAGTCTACATCAGCAAACTCACACAGTCAGACCTCACT										
Mus musculus	MEEBO	ILMN_213578	ILMN_213578	2210412E05RIK	scl075690.1_185	XM_355890.1			38086580	XM_355890.1	2210412E05Rik		ILMN_1213261	002370554	S	3349	CAAGGCTTGAAGTAGCCATTACCACATTAGACGGACTTCCCCCTCTCCCC										
Mus musculus	Riken	ILMN_204764	ILMN_204764	BICC1	ri|B930044I03|PX00164L05|AK047271|3050					AK047271	Bicc1		ILMN_2567433	004590224	S	2838	GTCTGATTCTCTAATGACCCACAGTGCAGTCAGCTCAGAGGCAGGCTGCT							The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]		
Mus musculus	Riken	ILMN_202258	ILMN_202258	GRIN2B	ri|0710001J21|R000005M01|AK002963|2462					AK002963	Grin2b		ILMN_2548201	000830477	S	2111	CACCCAGGGATGGATTGCTTTGCACTAATTGTGTGTGGCCCCCCATGGAG						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD [goid 17146] [evidence IPI]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IDA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IDA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Any process that modulates the establishment or extent of the postsynaptic membrane potential, which is generated by changes in the membrane potential of the post synaptic neuron that receives information at a synapse. The presynaptic neuron releases neurotransmitters into the synaptic cleft which bind to receptors on the postsynaptic neuron. After being bound by the neurotransmitters, these receptors can open or close an ion channel, allowing ions to enter or leave the cell and therefore altering the membrane potential of the postsynaptic neuron [goid 60078] [evidence IMP]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence TAS]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IGI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IGI]; The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure [goid 7423] [evidence IMP]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IMP];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IGI];  [goid 4972] [evidence IMP]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IGI]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220988	ILMN_260705	CCDC124	NM_026964.3	NM_026964.3		234388	133893353	NM_026964.3	Ccdc124	NP_081240.1	ILMN_1232067	000450053	S	552	TTGAGGAGGTGCAACTGCCACGGTTGAAGCAGGAGAACCCCAACATGCGG	8	-	73392435-73392484	8qB3.3	Mus musculus coiled-coil domain containing 124 (Ccdc124), mRNA.				1810023B24Rik	1810023B24Rik
Mus musculus	RefSeq	ILMN_213424	ILMN_213424	CRP	NM_007768.3	NM_007768.3		12944	87162477	NM_007768.3	Crp	NP_031794.2	ILMN_1247653	003710022	S	1610	ATCTGTACCTGAACTTCCCCAGTCCATGAGTCAATAAAGTCACCTTTGGC	1	+	174630079-174630091	1qH3	Mus musculus C-reactive protein, pentraxin-related (Crp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI255847	AI255847
Mus musculus	MEEBO	ILMN_212426	ILMN_212426	RBM12	scl075710.1_90	NM_029397.2			25952124	NM_029397.2	Rbm12		ILMN_2626300	002030424	S	3572	AATAGAAACGTGAGTAGAGCTCGTGGAGGGGGCTCATGCCAGTGATGGCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223311	ILMN_223311	CEPT1	NM_133869.3	NM_133869.3		99712	142365741	NM_133869.3	Cept1	NP_598630.2	ILMN_2762334	000650437	S	1833	GTGGCACATACATCTTACTAGCTTGTGAGGTGAGAGCAGTGATAAGGACC	3	-	106306068-106306117	3qF2.3	Mus musculus choline/ethanolaminephosphotransferase 1 (Cept1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Catalysis of the reaction: CDP-ethanolamine + 1,2-diacylglycerol = CMP + a phosphatidylethanolamine [goid 4307] [evidence IEA]; Catalysis of the reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine [goid 4142] [evidence IEA]	AI788721; BB118941; 9930118K05Rik	AI788721; BB118941; 9930118K05Rik
Mus musculus	RefSeq	ILMN_223862	ILMN_253828	PPP1R3F	NM_138605.2	NM_138605.2		54646	124248586	NM_138605.2	Ppp1r3f	NP_613071.2	ILMN_1255926	006770634	S	2761	GCTGGTCTCCTGTTTGGGCCTGAGTGTATAGGGTAGTCACATTCTGGGGA	X	-	7136205-7136254	XqA1.1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 3F (Ppp1r3f), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Sfc15; DXImx48e	Sfc15; DXImx48e
Mus musculus	RefSeq	ILMN_232232	ILMN_232232	LOC380994	NM_001037748.1	NM_001037748.1		380994	83627696	NM_001037748.1	LOC380994	NP_001032837.1	ILMN_2852764	006560132	S	40	CTCCTCTTAGATGAGCTAAGACTACTGAGTTCTTATGAGAAGAATGGCTC	Y|NT_166414.1	+	11811-11827:13188-13213:13214-13220		Mus musculus similar to Sycp3 like Y-linked (LOC380994), mRNA.				MGC118285; MGC118201	MGC118285; MGC118201
Mus musculus	RefSeq	ILMN_213549	ILMN_213549	ATP7B	NM_007511.2	NM_007511.2		11979	116256506	NM_007511.2	Atp7b	NP_031537.2	ILMN_2752104	004150270	S	3481	CGGTTTAACCATCTCCAGTGACATCAGTGACGCCATGACAGATCACGAGA	8	-	23110556-23110605	8qA2	Mus musculus ATPase, Cu++ transporting, beta polypeptide (Atp7b), mRNA.	The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IDA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions within a cell [goid 15680] [evidence IMP]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IDA]	Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+ = ADP + phosphate + Cu2+, directly driving the transport of the copper ions across a membrane [goid 43682] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+ = ADP + phosphate + Cu2+, directly driving the transport of the copper ions across a membrane [goid 43682] [evidence IMP]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	WND; tx; Atp7a	WND; tx; Atp7a
Mus musculus	RefSeq	ILMN_213549	ILMN_213549	ATP7B	NM_007511.2	NM_007511.2		11979	116256506	NM_007511.2	Atp7b	NP_031537.2	ILMN_2670738	004060730	S	3533	AAAGGACAGACGGCCATCCTGGTGGCCATTGATGGTGTGCTCTGCGGGAT	8	-	23108823-23108839:23110521-23110553	8qA2	Mus musculus ATPase, Cu++ transporting, beta polypeptide (Atp7b), mRNA.	The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IDA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions within a cell [goid 15680] [evidence IMP]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IDA]	Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+ = ADP + phosphate + Cu2+, directly driving the transport of the copper ions across a membrane [goid 43682] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+ = ADP + phosphate + Cu2+, directly driving the transport of the copper ions across a membrane [goid 43682] [evidence IMP]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	WND; tx; Atp7a	WND; tx; Atp7a
Mus musculus	RefSeq	ILMN_213549	ILMN_213549	ATP7B	NM_007511.2	NM_007511.2		11979	116256506	NM_007511.2	Atp7b	NP_031537.2	ILMN_2731102	002370112	S	3472	GCGGCGAAACGGTTTAACCATCTCCAGTGACATCAGTGACGCCATGACAG	8	-	23110565-23110614	8qA2	Mus musculus ATPase, Cu++ transporting, beta polypeptide (Atp7b), mRNA.	The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IDA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions within a cell [goid 15680] [evidence IMP]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IDA]	Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+ = ADP + phosphate + Cu2+, directly driving the transport of the copper ions across a membrane [goid 43682] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+ = ADP + phosphate + Cu2+, directly driving the transport of the copper ions across a membrane [goid 43682] [evidence IMP]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	WND; tx; Atp7a	WND; tx; Atp7a
Mus musculus	RefSeq	ILMN_213549	ILMN_213549	ATP7B	NM_007511.2	NM_007511.2		11979	116256506	NM_007511.2	Atp7b	NP_031537.2	ILMN_2638192	007610128	S	4604	GCCACTAGGTTGGGGAAAGTATACCATTCCTGCTTTTCATGAGGGCGAGA	8	-	23104877-23104926	8qA2	Mus musculus ATPase, Cu++ transporting, beta polypeptide (Atp7b), mRNA.	The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IDA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions within a cell [goid 15680] [evidence IMP]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IDA]	Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+ = ADP + phosphate + Cu2+, directly driving the transport of the copper ions across a membrane [goid 43682] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+ = ADP + phosphate + Cu2+, directly driving the transport of the copper ions across a membrane [goid 43682] [evidence IMP]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	WND; tx; Atp7a	WND; tx; Atp7a
Mus musculus	RefSeq	ILMN_226002	ILMN_226002	4930502E18RIK	NM_029142.1	NM_029142.1		75013	110626043	NM_029142.1	4930502E18Rik	NP_083418.1	ILMN_2858477	003130474	S	1146	CCTGCTAGTGGCTTTGTTTATTGATTGAGAGACATGCAGAGGGAGGCCAG	X	+	51041342-51041391	XqA5	Mus musculus RIKEN cDNA 4930502E18 gene (4930502E18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187083	ILMN_310009	2310014G06RIK	NM_001082975.1	NM_001082975.1		654795	131889221	NM_001082975.1	2310014G06Rik	NP_001076444.1	ILMN_2470889	003990445	S	1136	TGGCTTCTGTGTTACATTGTTGCCCTGGTTCTCATATATGCTGTGTAGAC	14	-	56516163-56516212	14qC3	Mus musculus RIKEN cDNA 2310014G06 gene (2310014G06Rik), mRNA.		The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218765	ILMN_218765	QDPR	NM_024236.1	NM_024236.1		110391	21312519	NM_024236.1	Qdpr	NP_077198.1	ILMN_2699933	004780463	S	963	GGGAAATGAGCAGAGGCCTGTAGGTAGCACCTGAGGGTCCAGGGAGGTAT	5	-	45825580-45825629	5qB3	Mus musculus quinoid dihydropteridine reductase (Qdpr), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NADP+ + 5,6,7,8-tetrahydropteridine = NADPH + H+ + 6,7-dihydropteridine [goid 4155] [evidence IEA]	Dhpr; PKU2; D5Ertd371e; 2610008L04Rik	Dhpr; PKU2; D5Ertd371e; 2610008L04Rik
Mus musculus	RefSeq	ILMN_216638	ILMN_216638	MFSD11	NM_178620.3	NM_178620.3		69900	57863770	NM_178620.3	Mfsd11	NP_848735.1	ILMN_2682173	002970424	S	242	CTGCTTCAAATTTGATCACTCCGTCCGTGGTCGCCATTGTTGGACCTCAG	11	+	116719814-116719863	11qE2	Mus musculus major facilitator superfamily domain containing 11 (Mfsd11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC113819; 2600014M03Rik	MGC113819; 2600014M03Rik
Mus musculus	RefSeq	ILMN_216551	ILMN_226234	FLNA	NM_010227.2	NM_010227.2		192176	125347375	NM_010227.2	Flna	NP_034357.2	ILMN_1245994	004490475	S	7937	GGACAAAGGGGAGTACACACTGGTGGTCAAGTGGGGTGATGAGCATATCC	X	-	71480118-71480167	XqA7.3	Mus musculus filamin, alpha (Flna), mRNA. XM_920635 XM_920660	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances, in membrane-bounded vesicles, from the early sorting endosomes to the late sorting endosomes; transport occurs along microtubules and can be experimentally blocked with microtubule-depolymerizing drugs [goid 45022] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]; Interacting selectively with protein kinase C [goid 5080] [evidence IDA]	Dilp2; ABP-280; F730004A14Rik; Fln1	Dilp2; ABP-280; F730004A14Rik; Fln1
Mus musculus	Riken	ILMN_205989	ILMN_205989	D430036N09RIK	ri|D430036N09|PX00195O21|AK052497|2092					AK052497	D430036N09Rik		ILMN_1223222	006020458	S	1845	AAGAAGGCACTTGGCAAGCCACAGCCGTCCTCTGAATGGATCCTCACTGC										
Mus musculus	Riken	ILMN_202424	ILMN_202424	2810425O13RIK	ri|2810425O13|ZX00046N05|AK013161|1281					AK013161	2810425O13Rik		ILMN_2549504	006650671	S	92	AAACTTTTACTGGCTGCTTGGAAAATGAAGATGCAGACTCCAGATTGGCG										
Mus musculus	RefSeq	ILMN_223763	ILMN_223763	CASD1	NM_145398.2	NM_145398.2		213819	37620156	NM_145398.2	Casd1	NP_663373.2	ILMN_2768787	001450041	S	3189	TCCAATCCAAACAGTCTATTTCTTTTTCCTAAACTATACCAGAATTTAAA	6	+	4592810-4592859	6qA1	Mus musculus CAS1 domain containing 1 (Casd1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC6840; Cas1; Cast1	MGC6840; Cas1; Cast1
Mus musculus	MEEBO	ILMN_220795	ILMN_220795	1810022O10RIK	scl00243924.1_251				51762998	XM_145521	1810022O10Rik		ILMN_2745463	007380377	S	1045	TCGAATGATCAGGTGCCTCAAAGTAGCACAGCTGGTACGGTTTGCTCTGC										
Mus musculus	MEEBO	ILMN_220795	ILMN_220795	1810022O10RIK	scl00243924.1_251				51762998	XM_145521	1810022O10Rik		ILMN_2745462	006840445	S	1044	GTCGAATGATCAGGTGCCTCAAAGTAGCACAGCTGGTACGGTTTGCTCTG										
Mus musculus	MEEBO	ILMN_220743	ILMN_220743	2310006J04RIK	scl0067620.2_98	NM_026278.2			31982649	NM_026278.2	2310006J04Rik		ILMN_1257248	005720079	S	1454	GACACCAATCAAATTGCTGGGAAGAGTATTCCGAGAGCAACCTCTTAGCC										
Mus musculus	RefSeq	ILMN_191756	ILMN_239220	PLXNC1	NM_018797.1	NM_018797.1		54712	9055375	NM_018797.1	Plxnc1	NP_061267.1	ILMN_2756855	006940397	S	4385	CAGAACAGCAACTGGGGAAGGAAGCACCAACCAATAAACTTCTCTATGCC	10	-	94257441-94257471:94259115-94259133	10qC2	Mus musculus plexin C1 (Plxnc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AW742158; Vespr; 2510048K12Rik; CD232	AW742158; Vespr; 2510048K12Rik; CD232
Mus musculus	RefSeq	ILMN_215941	ILMN_215941	PTPRR	NM_011217.1	NM_011217.1		19279	6755247	NM_011217.1	Ptprr	NP_035347.1	ILMN_2706730	001940736	S	2730	CCCTGTTGTAAGTGCTATTAACTATCTCAGTTACCAGAATCTTGCTGCTC	10	+	115711285-115711334	10qD2	Mus musculus protein tyrosine phosphatase, receptor type, R (Ptprr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	Gmcp1; PTPBR7; PTP-SL; mPTP213	Gmcp1; PTPBR7; PTP-SL; mPTP213
Mus musculus	RefSeq	ILMN_215941	ILMN_215941	PTPRR	NM_011217.1	NM_011217.1		19279	6755247	NM_011217.1	Ptprr	NP_035347.1	ILMN_2665459	004760392	S	928	TGGTTTGCATCAGAGTTTACCACAGTTTGGAATTACAGACGTCGCCCCTG	10	+	115599614-115599663	10qD2	Mus musculus protein tyrosine phosphatase, receptor type, R (Ptprr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	Gmcp1; PTPBR7; PTP-SL; mPTP213	Gmcp1; PTPBR7; PTP-SL; mPTP213
Mus musculus	RefSeq	ILMN_215941	ILMN_215941	PTPRR	NM_011217.1	NM_011217.1		19279	6755247	NM_011217.1	Ptprr	NP_035347.1	ILMN_2924500	002320475	S	3336	CACTCAGCAAACAGGAGATGTTCTGCTCAGATATGAATTTTCAATGCAGC	10	+	115711891-115711940	10qD2	Mus musculus protein tyrosine phosphatase, receptor type, R (Ptprr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	Gmcp1; PTPBR7; PTP-SL; mPTP213	Gmcp1; PTPBR7; PTP-SL; mPTP213
Mus musculus	RefSeq	ILMN_218224	ILMN_234561	2010002M12RIK	NM_053217.2	NM_053217.2		112419	141801872	NM_053217.2	2010002M12Rik	NP_444447.1	ILMN_2693141	004150192	S	1022	AAGCCTTGGAGACAAAACCTTCCTCTCCTTACTTGCATTTCCAGATTGGC	19	-	34693834-34693883	19qC1	Mus musculus RIKEN cDNA 2010002M12 gene (2010002M12Rik), mRNA.				AW412491	AW412491
Mus musculus	RefSeq	ILMN_210939	ILMN_249411	LOC674706	XM_976559.2	XM_976559.2		674706	149250317	XM_976559.2	LOC674706	XP_981653.2	ILMN_2610798	000580563	S	2967	CCAGCAAGAACTTGCAGAGGAGATTTCCACAGCTATCTCCAAACCTGTGG					PREDICTED: Mus musculus similar to Zinc finger protein 341 (LOC674706), mRNA.					
Mus musculus	RefSeq	ILMN_201556	ILMN_201556	RANGRF	NM_021329.2	NM_021329.2		57785	56961625	NM_021329.2	Rangrf	NP_067304.1	ILMN_2707147	000670253	S	480	GGCCTTGCTGCGGCTGCCCCAGTATCAGACTGATCTTTTGCTCACCTTCA	11	-	68786454-68786503	11qB3	Mus musculus RAN guanine nucleotide release factor (Rangrf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]	RP23-396M19.8; Mog1; MGC107268; 2400006H24Rik; Rangnrf	RP23-396M19.8; Mog1; MGC107268; 2400006H24Rik; Rangnrf
Mus musculus	MEEBO	ILMN_193286	ILMN_193286	MTDNA_ND3	mtDNA_ND3						mtDNA_ND3		ILMN_2495796	005260411	S	13	ACTGTTATCTTCATTAATATTTTATTATCCCTAACGCTAATTCTAGTTGC										
Mus musculus	RefSeq	ILMN_186312	ILMN_251930	NFATC2	NM_010899.2	NM_010899.2		18019	81295417	NM_010899.2	Nfatc2	NP_035029.2	ILMN_2626984	003830056	S	3190	CAAAGCCAAACAGCCTTGCCCTGACAGGACCACCTGTCCCAACTTCTCAG	2	-	168305330-168305379	2qH3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 (Nfatc2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISO]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	NFAT1-D; NFAT1; AI607462; Nfatp	NFAT1-D; NFAT1; AI607462; Nfatp
Mus musculus	RefSeq	ILMN_186312	ILMN_251930	NFATC2	NM_010899.2	NM_010899.2		18019	81295417	NM_010899.2	Nfatc2	NP_035029.2	ILMN_2761672	002070470	S	2849	AGGACCTCCCTCCCGAAATCAGACCTAGAAACAAACATAATCTCGCGACG	2	-	168305671-168305693:168305694-168305720	2qH3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 (Nfatc2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISO]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	NFAT1-D; NFAT1; AI607462; Nfatp	NFAT1-D; NFAT1; AI607462; Nfatp
Mus musculus	RefSeq	ILMN_251289	ILMN_251289	EG666085	NM_001081449.1	NM_001081449.1		666085	124517669	NM_001081449.1	EG666085	NP_001074918.1	ILMN_2803839	002850692	S	362	ACATTACATCTTCCCATGCAGTTACCCAGCTGATAATTCACTTTCAATGG	7	-	13217943-13217992	7qA1	Mus musculus predicted gene, EG666085 (EG666085), mRNA.				Feb06V2Rchr7-11.542	Feb06V2Rchr7-11.542
Mus musculus	Riken	ILMN_202856	ILMN_202856	4921507O14RIK	ri|4932409K22|PX00017E21|AK029948|2599					AK029948	4921507O14Rik		ILMN_1222618	006940138	S	2456	GCAAGGGCTTCATGTATGCTGGACAAGATGAACTACATGCCTCAGCCTTC										
Mus musculus	Riken	ILMN_206061	ILMN_206061	INSR	ri|D330005C22|PX00190J13|AK052187|1676					AK052187	Insr		ILMN_1251719	004610204	S	1399	GTAAGTCCTGGATGAGGGTCTGGGGAAGGAATTGGAAGCTGGTGCTATGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_202742	ILMN_202742	D530030H10RIK	ri|D530030H10|PX00089D14|AK021302|1111					AK021302	D530030H10Rik		ILMN_1255885	005420161	S	829	GTAGACACATATTTTATAGCCTGAGGAGGGCTGCGGGGAGTGAGCGTGCG										
Mus musculus	RefSeq	ILMN_210201	ILMN_210201	SYBL1	NM_011515.1	NM_011515.1		20955	33468928	NM_011515.1	Sybl1	NP_035645.1	ILMN_2883961	001980671	S	2091	CTCAGCCAACTATTAGCCTAGTCATGTGCCTTGAATATCTATGTGTCCTA	X	-	11131-11180		Mus musculus synaptobrevin like 1 (Sybl1), mRNA.				TI-VAMP; VAMP-7	TI-VAMP; VAMP-7
Mus musculus	RefSeq	ILMN_217985	ILMN_217985	TGM5	NM_028799.1	NM_028799.1		74176	27229193	NM_028799.1	Tgm5	NP_083075.1	ILMN_2690147	001070754	S	2157	CGTCCCCTTCAAGAGTGGCCAAAGGCAGATCCAAGCTAATCTGAGGAGCA	2	-	120737876-120737925	2qE5	Mus musculus transglutaminase 5 (Tgm5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC143848; 2310007C07Rik; TGMX; TGx; MGC143849	MGC143848; 2310007C07Rik; TGMX; TGx; MGC143849
Mus musculus	RefSeq	ILMN_217985	ILMN_217985	TGM5	NM_028799.1	NM_028799.1		74176	27229193	NM_028799.1	Tgm5	NP_083075.1	ILMN_2690144	000290209	S	2153	AGACCGTCCCCTTCAAGAGTGGCCAAAGGCAGATCCAAGCTAATCTGAGG	2	-	120737880-120737929	2qE5	Mus musculus transglutaminase 5 (Tgm5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC143848; 2310007C07Rik; TGMX; TGx; MGC143849	MGC143848; 2310007C07Rik; TGMX; TGx; MGC143849
Mus musculus	RefSeq	ILMN_199914	ILMN_199914	LOC381566	XM_358620.1	XM_358620.1			38078927	XM_358620.1	LOC381566		ILMN_1220295	002470192	S	884	TTCCAGCCGTTTCGTGGTTCTCCATCAGGAAGGGAGGGGGGCTGTGATTG										
Mus musculus	RefSeq	ILMN_216616	ILMN_216616	CTRL	NM_023182.2	NM_023182.2		109660	91598840	NM_023182.2	Ctrl	NP_075671.1	ILMN_2673260	004490324	S	733	GGGGCACTAAGAACTGCAACATACAAGCACCGGCCATGTACACTCGGGTC	8	-	108455999-108456048	8qD3	Mus musculus chymotrypsin-like (Ctrl), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during the chemical reactions and pathways resulting in the breakdown of a protein by individual cells [goid 51603] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Ctra-1; 1810004D15Rik; Ctra1; 0910001G08Rik; mFLJ00366; AV005227; FLJ00366	Ctra-1; 1810004D15Rik; Ctra1; 0910001G08Rik; mFLJ00366; AV005227; FLJ00366
Mus musculus	RefSeq	ILMN_259227	ILMN_259227	2610207I05RIK	NM_001031814.1	NM_001031814.1		233789	73532757	NM_001031814.1	2610207I05Rik	NP_001026984.1	ILMN_2930057	002600079	S	15125	GGCAGTGGTTGTTCTCCCTTTTTCTGACAGTGTGGTTCAGCTCCTGTTTC	7	-	125275204-125275253	7qF2	Mus musculus RIKEN cDNA 2610207I05 gene (2610207I05Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA0421; C130002K18Rik; 5430435M13Rik	mKIAA0421; C130002K18Rik; 5430435M13Rik
Mus musculus	RefSeq	ILMN_188315	ILMN_259227	2610207I05RIK	NM_001031814.1	NM_001031814.1		233789	73532757	NM_001031814.1	2610207I05Rik	NP_001026984.1	ILMN_2451627	003460139	S	15400	AAAAGTTGAATAAATAACACCAGCTTCCTGAAAATGTCCATAATGCATCA	7	-	125274929-125274978	7qF2	Mus musculus RIKEN cDNA 2610207I05 gene (2610207I05Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA0421; C130002K18Rik; 5430435M13Rik	mKIAA0421; C130002K18Rik; 5430435M13Rik
Mus musculus	RefSeq	ILMN_193589	ILMN_259227	2610207I05RIK	NM_001031814.1	NM_001031814.1		233789	73532757	NM_001031814.1	2610207I05Rik	NP_001026984.1	ILMN_2498580	003830195	S	2046	TTGGGAGAAATGACTTGTGCACTAAACAATCTGCTACACAGTCTCCAGCT	7	-	125337099-125337148	7qF2	Mus musculus RIKEN cDNA 2610207I05 gene (2610207I05Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA0421; C130002K18Rik; 5430435M13Rik	mKIAA0421; C130002K18Rik; 5430435M13Rik
Mus musculus	RefSeq	ILMN_194551	ILMN_259227	2610207I05RIK	NM_001031814.1	NM_001031814.1		233789	73532757	NM_001031814.1	2610207I05Rik	NP_001026984.1	ILMN_2507446	000060458	S	2144	GTTCAACATTGACAATGCCAACTTTGTAGTTATATTTGATCTCAGTGCAC	7	-	125337001-125337050	7qF2	Mus musculus RIKEN cDNA 2610207I05 gene (2610207I05Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA0421; C130002K18Rik; 5430435M13Rik	mKIAA0421; C130002K18Rik; 5430435M13Rik
Mus musculus	RefSeq	ILMN_205209	ILMN_259227	2610207I05RIK	NM_001031814.1	NM_001031814.1		233789	73532757	NM_001031814.1	2610207I05Rik	NP_001026984.1	ILMN_1257239	004570601	S	6186	CAGATGCTTGTGGCAGAGCTTCGTAGGGTCACTGTACTCTGGGATGAGCT	7	-	125309585-125309634	7qF2	Mus musculus RIKEN cDNA 2610207I05 gene (2610207I05Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA0421; C130002K18Rik; 5430435M13Rik	mKIAA0421; C130002K18Rik; 5430435M13Rik
Mus musculus	RefSeq	ILMN_223041	ILMN_223041	MAD1L1	NM_010752.3	NM_010752.3		17120	115648090	NM_010752.3	Mad1l1	NP_034882.2	ILMN_2758523	005690601	S	2361	GCATCATGTCACAAACACTAGCCGTGGCCTCTGCTCAAGCAGCCACTGTC	5	-	140484872-140484921	5qG2	Mus musculus mitotic arrest deficient 1-like 1 (Mad1l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		Mad1; AI173502; AW550425	Mad1; AI173502; AW550425
Mus musculus	RefSeq	ILMN_211711	ILMN_211711	1700016H13RIK	XM_132216.7	XM_132216.7		74218	94374981	XM_132216.7	1700016H13Rik	XP_132216.1	ILMN_2618779	005270564	S	796	TGCCTATGGCGATGAGGCCAGTGTTTCCAGACACGGCTCGGTGGATGCTA	5	-	104077698-104077747	5qE5	PREDICTED: Mus musculus RIKEN cDNA 1700016H13 gene, transcript variant 1 (1700016H13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197981	ILMN_249576	GM608	NM_001029889.1	NM_001029889.1		207806	71274137	NM_001029889.1	Gm608	NP_001025060.1	ILMN_1256630	000510148	S	627	GCTCAACGGAGGGAGCAGCGAACAAGCTGAAGAAATTAAAAAGCTACGGA	16	+	44212824-44212849:44215528-44215551	16qB4	Mus musculus gene model 608, (NCBI) (Gm608), mRNA.				Gm1779; mKIAA2018	Gm1779; mKIAA2018
Mus musculus	RefSeq	ILMN_200180	ILMN_249576	GM608	NM_001029889.1	NM_001029889.1		207806	71274137	NM_001029889.1	Gm608	NP_001025060.1	ILMN_1239338	002450377	S	327	AAGGCCGAGAGAAGCCCTGCAGTGGATGAGCACGGAACTGTAATGTGGGG	16	+	44199229-44199278	16qB4	Mus musculus gene model 608, (NCBI) (Gm608), mRNA.				Gm1779; mKIAA2018	Gm1779; mKIAA2018
Mus musculus	RefSeq	ILMN_249576	ILMN_249576	GM608	NM_001029889.1	NM_001029889.1		207806	71274137	NM_001029889.1	Gm608	NP_001025060.1	ILMN_2909681	006860154	S	8950	AACTGAATAGAGGGAGAGGTACACAGAACTGCCCGCCCGTTGGCTGGGTG	16	+	44223825-44223874	16qB4	Mus musculus gene model 608, (NCBI) (Gm608), mRNA.				Gm1779; mKIAA2018	Gm1779; mKIAA2018
Mus musculus	RefSeq	ILMN_214305	ILMN_214305	1810030O07RIK	NM_175141.4	NM_175141.4		69155	146198579	NM_175141.4	1810030O07Rik	NP_780350.1	ILMN_2646649	001470707	S	2224	TGGGAATTACCTGTAAGGCATCTAAAGGAAAGAAACGGTTTGAAGGGTGG				XqA1.1	Mus musculus RIKEN cDNA 1810030O07 gene (1810030O07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215905	ILMN_215905	LRPPRC	NM_028233.1	NM_028233.1		72416	21389319	NM_028233.1	Lrpprc	NP_082509.1	ILMN_2845214	001440541	S	3588	CTGAGAGCAGCCTTGGATTTGAAGCAGGTTCCGTCCCAGATCGCCGTGAC	17	-	84618928-84618977	17qE4	Mus musculus leucine-rich PPR-motif containing (Lrpprc), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]	GP130; 3110001K13Rik; C76645; Lrp130; LSFC	GP130; 3110001K13Rik; C76645; Lrp130; LSFC
Mus musculus	RefSeq	ILMN_215905	ILMN_215905	LRPPRC	NM_028233.1	NM_028233.1		72416	21389319	NM_028233.1	Lrpprc	NP_082509.1	ILMN_2845208	005700484	S	4177	GCATGAAAAGCTATGCCTTAGACAAAGATGTGGCCTCGGCTAAAGCACTG	17	-	84613696-84613741:84613742-84613745	17qE4	Mus musculus leucine-rich PPR-motif containing (Lrpprc), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]	GP130; 3110001K13Rik; C76645; Lrp130; LSFC	GP130; 3110001K13Rik; C76645; Lrp130; LSFC
Mus musculus	RefSeq	ILMN_212234	ILMN_212234	KRT28	XM_203344.4	XM_203344.4		70843	94409639	XM_203344.4	Krt28	XP_203344.3	ILMN_2624267	003850653	S	327	GGTGAAGACGGTGGTTGAAGAAATAGATCAGCGTGGGAAGGTGCTGTCCT					PREDICTED: Mus musculus keratin 28 (Krt28), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219325	ILMN_219325	DTNB	NM_007886.1	NM_007886.1		13528	6681234	NM_007886.1	Dtnb	NP_031912.1	ILMN_2920027	000070438	S	2136	GGCTGCCAGACTCACTCAACCTCCAGAGAGAGGAGCCAAGCCTATGGGAA	12	+	3781213-3781262	12qA1.1	Mus musculus dystrobrevin, beta (Dtnb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	dtn-b	dtn-b
Mus musculus	RefSeq	ILMN_211612	ILMN_211612	OLFR1145	NM_146320.2	NM_146320.2		258317	121247418	NM_146320.2	Olfr1145	NP_666432.2	ILMN_2617646	000620373	S	807	TGGGTCTGGCACCATTACATACTTGAGGCCAAAGTCTACGCATTCCCCTG	2	+	87650785-87650834	2qD	Mus musculus olfactory receptor 1145 (Olfr1145), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR264-19	MOR264-19
Mus musculus	RefSeq	ILMN_209504	ILMN_209504	LPAR3	NM_022983.3	NM_022983.3		65086	142352989	NM_022983.3	Lpar3	NP_075359.1	ILMN_2596435	002340575	S	1826	CCGCTGAGGGGCTTGCTGGATCCCAAGTGCAAAGTAATTGCACATCGAGT	3	+	145948534-145948583	3qH2	Mus musculus lysophosphatidic acid receptor 3 (Lpar3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The assembly of a bleb, a cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32060] [evidence IGI]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IDA]	lpA3	lpA3
Mus musculus	RefSeq	ILMN_201895	ILMN_255345	LOC677375	XM_001002943.1	XM_001002943.1		677375	94377884	XM_001002943.1	LOC677375	XP_001002943.1	ILMN_1247736	003890608	S	102	AGGAGAAGAGATAGCATGTGACGTACCAAGTGGAGCGAGGGGCAGCACAG				6qF1	PREDICTED: Mus musculus hypothetical LOC677375 (LOC677375), mRNA.					
Mus musculus	RefSeq	ILMN_200556	ILMN_315364	LOC100045947	XM_001475336.1	XM_001475336.1		100045947	149269964	XM_001475336.1	LOC100045947	XP_001475386.1	ILMN_1257768	002470059	S	623	TCCTGGAGCCCACCGAGCAGCCCTTAGTTTTTAAGACAGCCTTTGCCCCG					PREDICTED: Mus musculus similar to NTAK alpha2, transcript variant 1 (LOC100045947), mRNA.					
Mus musculus	RefSeq	ILMN_223736	ILMN_315364	LOC100045947	XM_001475336.1	XM_001475336.1		100045947	149269964	XM_001475336.1	LOC100045947	XP_001475386.1	ILMN_1246781	007560053	S	1365	GCAGAACATGTGCCCAGCCCACCAGAACCGAAGCCTGGCCAACGGGCCCA					PREDICTED: Mus musculus similar to NTAK alpha2, transcript variant 1 (LOC100045947), mRNA.					
Mus musculus	RefSeq	ILMN_241154	ILMN_241154	EAR12	NM_001012766.1	NM_001012766.1		503845	61097918	NM_001012766.1	Ear12	NP_001012784.1	ILMN_2814127	004540543	S	320	GCATCACCAGTCGGAGAAGAACACCTTATACCCAATGCAGATACCAACCA					Mus musculus eosinophil-associated, ribonuclease A family, member 12 (Ear12), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	Riken	ILMN_206416	ILMN_206416	C230027G13RIK	ri|C230027G13|PX00174C17|AK082238|2443					AK082238	C230027G13Rik		ILMN_1258435	005340753	S	2315	GATGGCTGCAATGTGGGTGCTTGGAACCTAACCTGGGGTCCTCTGGAAAG										
Mus musculus	RefSeq	ILMN_211197	ILMN_211197	2310039E09RIK	NM_026509.1	NM_026509.1		68016	13385999	NM_026509.1	2310039E09Rik	NP_080785.1	ILMN_2897214	000540615	S	1936	ACGAGGCTCCAAGGCCAGAGCTGAGCGGAAAGTGGGGTGGTTCAAAGTCT	4	+	48694527-48694576	4qB1	Mus musculus RIKEN cDNA 2310039E09 gene (2310039E09Rik), mRNA.				MGC107637	MGC107637
Mus musculus	MEEBO	ILMN_214889	ILMN_214889	2010005J08RIK	scl0072046.1_240	NM_178623.2			31340871	NM_178623.2	2010005J08Rik		ILMN_1226228	002750612	S	3165	GCTGGCAGACAGGGGTGTTTCAGGTTGTCCCAAGGAAGCAGACTCCACAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	Riken	ILMN_207170	ILMN_207170	F830008E12RIK	ri|F830008E12|PL00004J20|AK089672|1713					AK089672	F830008E12Rik		ILMN_2585573	004070630	S	1269	CCCAAAGCCCACTCCCAATGACACACCTCCTCTAACAAAGCCACACCCCT										
Mus musculus	RefSeq	ILMN_221464	ILMN_221464	TLR13	NM_205820.1	NM_205820.1		279572	45429998	NM_205820.1	Tlr13	NP_991389.1	ILMN_2894587	007320020	S	3590	GGGGAGATTGAAATATTCCACCCTGCATGGAAGCTTGTTAAGACAGGAGG	X	+	103355408-103355457	XqD	Mus musculus toll-like receptor 13 (Tlr13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]	Gm713; AI666735	Gm713; AI666735
Mus musculus	RefSeq	ILMN_221464	ILMN_221464	TLR13	NM_205820.1	NM_205820.1		279572	45429998	NM_205820.1	Tlr13	NP_991389.1	ILMN_2735961	002900575	S	3445	GCTCATGTTGTTTCTCCAAATCAGTTGTGGTCATGGGAGACTGCACTTGT	X	+	103355263-103355312	XqD	Mus musculus toll-like receptor 13 (Tlr13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]	Gm713; AI666735	Gm713; AI666735
Mus musculus	MEEBO	ILMN_217087	ILMN_217087	B830007D08RIK	scl35449.1.1_268	XM_150222.1			20893717	XM_150222.1	B830007D08Rik		ILMN_1230345	005360253	S	701	CGCTGTATGTCCGCTCCATATACAGTTTTCGATGGTGTAGTGCATGCAAA										
Mus musculus	RefSeq	ILMN_214298	ILMN_234421	DIO1	NM_007860.3	NM_007860.3		13370	110825975	NM_007860.3	Dio1	NP_031886.3	ILMN_2772070	003130612	S	241	GTTTGTCCTGAAGGTCCGCTGGCAGAGACTGGAAGACAGGGCTGAGTTTG	4	-	106979458-106979507	4qC7	Mus musculus deiodinase, iodothyronine, type I (Dio1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3,5,3'-L-triiodo-L-thyronine + iodide + acceptor + H+ = L-thyroxine + donor-H2 [goid 4800] [evidence IDA]	ITDI1; MGC107659; 5DI; TXDI1; D1	ITDI1; MGC107659; 5DI; TXDI1; D1
Mus musculus	RefSeq	ILMN_214298	ILMN_234421	DIO1	NM_007860.3	NM_007860.3		13370	110825975	NM_007860.3	Dio1	NP_031886.3	ILMN_2647234	004860341	S	1110	CTCCTGAAGATGACGTCAAAAGCTCAATCCATGTGTCCAATTTTGCCACT	4	-	106964574-106964623	4qC7	Mus musculus deiodinase, iodothyronine, type I (Dio1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3,5,3'-L-triiodo-L-thyronine + iodide + acceptor + H+ = L-thyroxine + donor-H2 [goid 4800] [evidence IDA]	ITDI1; MGC107659; 5DI; TXDI1; D1	ITDI1; MGC107659; 5DI; TXDI1; D1
Mus musculus	RefSeq	ILMN_191823	ILMN_247988	1700084E18RIK	XM_979472.1	XM_979472.1		67350	94366450	XM_979472.1	1700084E18Rik	XP_984566.1	ILMN_1216439	003170553	S	933	TTAGCTGACTCGCTGCCCAAACTCTTCAGGTGCCCGCAAATGTAACTGCC	2	-	30087572-30087621	2qB	PREDICTED: Mus musculus RIKEN cDNA 1700084E18 gene (1700084E18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_241424	ILMN_241424	PIGW	NM_001077636.1	NM_001077636.1		70325	117647260	NM_001077636.1	Pigw	NP_001071104.1	ILMN_3150102	000450152	A	2066	CAGGCGTGAGCCACCACACCCACTTGTTGATAGTTTTGACACTGGAAGGT	11	-	84689957-84690006	11qC	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class W (Pigw), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor) [goid 16746] [evidence IEA]	Gwt1; 2610044A17Rik	Gwt1; 2610044A17Rik
Mus musculus	RefSeq	ILMN_214444	ILMN_224984	KNTC1	NM_001042421.1	NM_001042421.1		208628	109288013	NM_001042421.1	Kntc1	NP_001035886.1	ILMN_2648080	001410070	S	6690	ATTCAAAGCATTGTGGGAAGCCTGTGCCAGCAGATGCAGCTCCCTGTGAG	5	+	124269911-124269960	5qF	Mus musculus kinetochore associated 1 (Kntc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		D330012D13	D330012D13
Mus musculus	RefSeq	ILMN_217612	ILMN_217612	WWC2	NM_133791.4	NM_133791.4		52357	118130862	NM_133791.4	Wwc2	NP_598552.2	ILMN_2685464	002650239	S	4972	AGAGCCGTGTTCTTCAAGCTGGGTTTTAACTTACCAGACCCCGGGCACTT	8	-	48912969-48913018	8qB1.1	Mus musculus WW, C2 and coiled-coil domain containing 2 (Wwc2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D8Ertd594e; C85457; AU022508; 5330431C14Rik	D8Ertd594e; C85457; AU022508; 5330431C14Rik
Mus musculus	RefSeq	ILMN_217612	ILMN_217612	WWC2	NM_133791.4	NM_133791.4		52357	118130862	NM_133791.4	Wwc2	NP_598552.2	ILMN_2748806	002470601	S	3761	AACGCAGAGAGGTTGATGAGGCAGGTCTCCAAGGATGTGTGCCGACTGCG	8	-	48917007-48917056	8qB1.1	Mus musculus WW, C2 and coiled-coil domain containing 2 (Wwc2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D8Ertd594e; C85457; AU022508; 5330431C14Rik	D8Ertd594e; C85457; AU022508; 5330431C14Rik
Mus musculus	RefSeq	ILMN_198379	ILMN_198379	LOC381190	XM_358523.1	XM_358523.1			38084753	XM_358523.1	LOC381190		ILMN_1237834	003360070	S	311	CAGATCGGGACGGAGGTTAACTGATACAGAATGGGCCACAAAACGGGCCC										
Mus musculus	RefSeq	ILMN_191850	ILMN_191850	USF2	NM_011680.1	NM_011680.1		22282	6755944	NM_011680.1	Usf2	NP_035810.1	ILMN_2513041	005690280	S	717	CACCCCTATTCTCCGAAAATTGATGGAACCAGAACTCCTCGAGATGAGAG	7	-	31732061-31732078:31739763-31739794	7qB1	Mus musculus upstream transcription factor 2 (Usf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter [goid 432] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Usf-2; MGC91056	Usf-2; MGC91056
Mus musculus	RefSeq	ILMN_191850	ILMN_191850	USF2	NM_011680.1	NM_011680.1		22282	6755944	NM_011680.1	Usf2	NP_035810.1	ILMN_2519634	004060300	S	1616	TTTATGGAAAATGGACAAAAAATAGAGAGAGAGGTATTTAACTGCAATAA				7qB1	Mus musculus upstream transcription factor 2 (Usf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter [goid 432] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Usf-2; MGC91056	Usf-2; MGC91056
Mus musculus	RefSeq	ILMN_191850	ILMN_191850	USF2	NM_011680.1	NM_011680.1		22282	6755944	NM_011680.1	Usf2	NP_035810.1	ILMN_2482756	004280358	S	8	AGGCACGATTTGCTTATTTTCCAGCATCCAGTGTGGGCGATACCACAGCT	7	-	31741741-31741776:31741777-31741790	7qB1	Mus musculus upstream transcription factor 2 (Usf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter [goid 432] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Usf-2; MGC91056	Usf-2; MGC91056
Mus musculus	Riken	ILMN_207052	ILMN_207052	NCOA2	ri|E130119M23|PX00092K21|AK087443|3808					AK087443	Ncoa2		ILMN_1217248	005560026	S	3583	CTTTTTAACCCAGAGAGGAGCAAAGAACACGGTGGGGGCTCGCAGCTCGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any series of molecular signals generated as a consequence of a steroid hormone binding to its receptor [goid 30518] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IGI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA];  [goid 30375] [evidence IDA];  [goid 30374] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]		
Mus musculus	Riken	ILMN_204643	ILMN_204643	E430033D06RIK	ri|E430033D06|PX00100J22|AK088950|4061					AK088950	E430033D06Rik		ILMN_2566545	002470373	S	2949	GGTGATGCGGTCAGATAATGGCTGATGTGGCTCGATGCTCCATCTCAGTC										
Mus musculus	RefSeq	ILMN_221479	ILMN_221479	OLFR97	NM_146512.1	NM_146512.1		258505	33239263	NM_146512.1	Olfr97	NP_666723.1	ILMN_2736190	001240612	S	580	AGAGTCTAATGATGGCTTTGGCTGGAGTTTTGGGAATCAGTGCACTGCTC	17	-	37417375-37417424	17qB1	Mus musculus olfactory receptor 97 (Olfr97), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR156-2	MOR156-2
Mus musculus	RefSeq	ILMN_220950	ILMN_244472	ARPM1	NM_029690.2	NM_029690.2		76652	142376348	NM_029690.2	Arpm1	NP_083966.1	ILMN_2729052	004220484	S	1507	GGTGGGTGTTGTAGGAGATGAGCCACAGCTCAGAAATCGCCACAGCTCAG	3	-	30496330-30496379	3qA3	Mus musculus actin related protein M1 (Arpm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC130225; 1700119I24Rik	MGC130225; 1700119I24Rik
Mus musculus	RefSeq	ILMN_197489	ILMN_310856	EG626367	XR_032288.1	XR_032288.1		626367	149250861	XR_032288.1	EG626367		ILMN_1237565	005700408	S	6	GGCCCGGCAGAATGGCTCCTGCAAAGAAGGGTGGTGAGAAGAAGGGCCGT	3	+	37633641-37633690	3qB	PREDICTED: Mus musculus predicted gene, EG626367 (EG626367), misc RNA.					
Mus musculus	RefSeq	ILMN_197762	ILMN_237926	KCNK9	NM_001033876.1	NM_001033876.1		223604	76443667	NM_001033876.1	Kcnk9	NP_001029048.1	ILMN_1224831	002100008	S	100	GAGATGCGCGAGGAGGAGAAACTTAAAGCCGAAGAAGTCCGTCTCAGAGG	15	-	72376560-72376609	15qD3	Mus musculus potassium channel, subfamily K, member 9 (Kcnk9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence ISO]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence ISO]	Task3	Task3
Mus musculus	RefSeq	ILMN_197763	ILMN_237926	KCNK9	NM_001033876.1	NM_001033876.1		223604	76443667	NM_001033876.1	Kcnk9	NP_001029048.1	ILMN_1218268	000150092	S	1100	CTCCAGACGTGCTGAGGAACACCTACTTCCGGTCCGTTTTCGGCGCCATT	15	-	72342608-72342657	15qD3	Mus musculus potassium channel, subfamily K, member 9 (Kcnk9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence ISO]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence ISO]	Task3	Task3
Mus musculus	RefSeq	ILMN_237926	ILMN_237926	KCNK9	NM_001033876.1	NM_001033876.1		223604	76443667	NM_001033876.1	Kcnk9	NP_001029048.1	ILMN_2922808	006620619	S	1160	TGCACACCTGCGGGGACCATAGGCTGCACCTCCGTCGCAAGTCCATCTAA				15qD3	Mus musculus potassium channel, subfamily K, member 9 (Kcnk9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence ISO]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence ISO]	Task3	Task3
Mus musculus	RefSeq	ILMN_241501	ILMN_241501	1700024G13RIK	NM_001034037.1	NM_001034037.1		67085	77404226	NM_001034037.1	1700024G13Rik	NP_001029209.1	ILMN_2788707	000160376	S	342	CAGTCTACAGTACCTGCAAAAGGGGCTTAGGAGCCACATGGACGGTGGGC	14	-	33189694-33189743	14qB	Mus musculus RIKEN cDNA 1700024G13 gene (1700024G13Rik), mRNA.				MGC130144; MGC130143	MGC130144; MGC130143
Mus musculus	Riken	ILMN_204016	ILMN_204016	A630046H09RIK	ri|A630046H09|PX00145D23|AK041909|2986					AK041909	A630046H09Rik		ILMN_1215630	003830286	S	2720	TCCTGGAACTCACAGAAACCTGACTGCCTCTGCTTCCCCAGGGTTGGGCT										
Mus musculus	MEEBO	ILMN_190622	ILMN_190622	TAF13	scl22718.4_567				20270191	NM_025444	Taf13		ILMN_2471814	000650068	S	15	CGCATTTTTTACCCACTTTATACAGAAAAGTGTGTGCACCCTGAATTGAC						Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219013	ILMN_219013	NUMBL	NM_010950.2	NM_010950.2		18223	87042276	NM_010950.2	Numbl	NP_035080.2	ILMN_2775005	004830593	S	2293	CCTAGTTTCTGTTGTGCCCTTCCACCTTCCAGTGTTGGGCAGGGTGGAGG	7	+	28066729-28066778	7qA3	Mus musculus numb-like (Numbl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]		nbl	nbl
Mus musculus	RefSeq	ILMN_219013	ILMN_219013	NUMBL	NM_010950.2	NM_010950.2		18223	87042276	NM_010950.2	Numbl	NP_035080.2	ILMN_1221506	001240113	S	304	AACAAGTTACGGCAGAGTCTGCGGCGGAGGAAGCCAGCCTATGTGCCTGA	7	+	28049912-28049961	7qA3	Mus musculus numb-like (Numbl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]		nbl	nbl
Mus musculus	RefSeq	ILMN_185641	ILMN_256527	CYP51	NM_020010.2	NM_020010.2		13121	71061450	NM_020010.2	Cyp51	NP_064394.2	ILMN_2688075	000540020	S	1695	GAAGTTTGCCTATGTGCCATTTGGAGCTGGGCGTCATCGTTGTGTTGGAG	5	-	4083282-4083303:4086460-4086487	5qA1	Mus musculus cytochrome P450, family 51 (Cyp51), mRNA.		The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence TAS]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: obtusifoliol + 3 O2 + 3 NADPH + 3 H+ = 4-alpha-methyl-5-alpha-ergosta-8,14,24(28)-trien-3-beta-ol + formate + 3 NADP+ + 3 H2O [goid 8398] [evidence TAS]	AI426508	AI426508
Mus musculus	RefSeq	ILMN_220713	ILMN_321026	AI854703	XR_035307.1	XR_035307.1		243373	149255141	XR_035307.1	AI854703		ILMN_2725719	006040681	S	3121	ATGGTTGGATATTCCCAAAGGTCCCTGATATCTGTTGGAGGAGGTGACTC	6	+	48583618-48583667	6qB2.3	PREDICTED: Mus musculus expressed sequence AI854703 (AI854703), misc RNA.					
Mus musculus	RefSeq	ILMN_196582	ILMN_196582	AP1GBP1	NM_194341.1	NM_194341.1		217030	34996506	NM_194341.1	Ap1gbp1	NP_919322.1	ILMN_2935734	003370112	S	4093	TAAAGAGAGCACTGCTGTCTCCACTGGACAGTGGCAGGCAAGGAGGACAC	11	+	83855101-83855150	11qC	Mus musculus AP1 gamma subunit binding protein 1 (Ap1gbp1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	L71-5; SYNG; C76297; AF007009	L71-5; SYNG; C76297; AF007009
Mus musculus	RefSeq	ILMN_196582	ILMN_196582	AP1GBP1	NM_194341.1	NM_194341.1		217030	34996506	NM_194341.1	Ap1gbp1	NP_919322.1	ILMN_2669146	003140634	S	3954	GTCTTCAGCCGGCTCGCTTATATCGCCGTCATCATGGCTCTAGGAAGCAG	11	+	83854962-83855011	11qC	Mus musculus AP1 gamma subunit binding protein 1 (Ap1gbp1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	L71-5; SYNG; C76297; AF007009	L71-5; SYNG; C76297; AF007009
Mus musculus	RefSeq	ILMN_185953	ILMN_313836	2810001G20RIK	XM_001476904.1	XM_001476904.1		66456	149261919	XM_001476904.1	2810001G20Rik	XP_001476954.1	ILMN_2431398	002340397	S	431	GTATCCTGGCTGATGTATTTAGTGAATGGCCTAGGGGGCTGAACAACCTG	11	+	63896393-63896442	11qB3	PREDICTED: Mus musculus RIKEN cDNA 2810001G20 gene (2810001G20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200258	ILMN_200258	LOC386082	XM_359061.1	XM_359061.1			38081127	XM_359061.1	LOC386082		ILMN_1248832	007550615	S	159	GGACCTGGAGGGCATCATCCTGAGTGAGATTGCTTTTACAAAAATTCAGG										
Mus musculus	RefSeq	ILMN_217096	ILMN_217096	DCTN2	NM_027151.1	NM_027151.1		69654	28076934	NM_027151.1	Dctn2	NP_081427.1	ILMN_2679063	005290187	S	1552	CGTCCTCTAACGTCTGTCTCTGGCCGAGTCTAACACTGTACAACTGTCTC	10	+	126718786-126718835	10qD3	Mus musculus dynactin 2 (Dctn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DCTN-50; C130077D06Rik; 2310042E05Rik; RBP50; p50; C87049	DCTN-50; C130077D06Rik; 2310042E05Rik; RBP50; p50; C87049
Mus musculus	RefSeq	ILMN_217096	ILMN_217096	DCTN2	NM_027151.1	NM_027151.1		69654	28076934	NM_027151.1	Dctn2	NP_081427.1	ILMN_2707623	004150632	S	38	CACTCGGTCACCAGCCCCGGCTCCTCCGAGGCCTCGGTCCCCCAGCCCCG	10	+	126703492-126703541	10qD3	Mus musculus dynactin 2 (Dctn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DCTN-50; C130077D06Rik; 2310042E05Rik; RBP50; p50; C87049	DCTN-50; C130077D06Rik; 2310042E05Rik; RBP50; p50; C87049
Mus musculus	RefSeq	ILMN_217096	ILMN_217096	DCTN2	NM_027151.1	NM_027151.1		69654	28076934	NM_027151.1	Dctn2	NP_081427.1	ILMN_2859659	006270167	S	1207	TGCTCTCCTGACCCAGGTGCAGACAACGATGCGTGAAAACTTGGCCACAG	10	+	126715449-126715464:126718457-126718490	10qD3	Mus musculus dynactin 2 (Dctn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DCTN-50; C130077D06Rik; 2310042E05Rik; RBP50; p50; C87049	DCTN-50; C130077D06Rik; 2310042E05Rik; RBP50; p50; C87049
Mus musculus	RefSeq	ILMN_212348	ILMN_240731	OLFR1286	NM_207254.1	NM_207254.1		277562	46402260	NM_207254.1	Olfr1286	NP_997137.1	ILMN_1229865	001660594	S	836	CACCTCTCCTGAATCCAGCCATCTACACACTGAGAAATAAAGATATTAAA	2	-	111260221-111260270	2qE3	Mus musculus olfactory receptor 1286 (Olfr1286), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	GA_x6K02T2Q125-72472405-72471488; GA_x5J8B7TU5VU-1563-1372; MOR248-21	GA_x6K02T2Q125-72472405-72471488; GA_x5J8B7TU5VU-1563-1372; MOR248-21
Mus musculus	RefSeq	ILMN_196713	ILMN_196713	KLRA12	NM_010646.1	NM_010646.1		16630	21327664	NM_010646.1	Klra12	NP_034776.1	ILMN_2911776	003170398	S	419	AGAACAGATGGTACAGTGAAACCAAGACTTTTTCAGATTCCTCACAGCAC	6	-	130253182-130253231	6qF3	Mus musculus killer cell lectin-like receptor subfamily A, member 12 (Klra12), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ly49l3; Ly49L; Ly49l2; Ly49l4; Ly49p/d; Ly49l1	Ly49l3; Ly49L; Ly49l2; Ly49l4; Ly49p/d; Ly49l1
Mus musculus	RefSeq	ILMN_196713	ILMN_196713	KLRA12	NM_010646.1	NM_010646.1		16630	21327664	NM_010646.1	Klra12	NP_034776.1	ILMN_1254647	006270630	S	604	GAGGATGAACTGAAGTTCCTTAAGCTCCTGGTTCCTTCAGACAGTTGCTG	6	-	130248786-130248824:130251166-130251176	6qF3	Mus musculus killer cell lectin-like receptor subfamily A, member 12 (Klra12), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ly49l3; Ly49L; Ly49l2; Ly49l4; Ly49p/d; Ly49l1	Ly49l3; Ly49L; Ly49l2; Ly49l4; Ly49p/d; Ly49l1
Mus musculus	RefSeq	ILMN_196713	ILMN_196713	KLRA12	NM_010646.1	NM_010646.1		16630	21327664	NM_010646.1	Klra12	NP_034776.1	ILMN_1254500	004260538	S	689	GGGCATGGATTAACAATGGCCCATCTAAACTTGCCTTGAACACAATGAAA	6	-	130216558-130216577:130248721-130248750	6qF3	Mus musculus killer cell lectin-like receptor subfamily A, member 12 (Klra12), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ly49l3; Ly49L; Ly49l2; Ly49l4; Ly49p/d; Ly49l1	Ly49l3; Ly49L; Ly49l2; Ly49l4; Ly49p/d; Ly49l1
Mus musculus	RefSeq	ILMN_195323	ILMN_195323	V1RE1	NM_134190.1	NM_134190.1		171224	21717702	NM_134190.1	V1re1	NP_598951.1	ILMN_1224914	006650273	S	625	GGACACAAAAAGAGGGTTCAACACATCCTCCACACTCATGCTTCCCCTAG	17	+	20952083-20952132	17qA3.2	Mus musculus vomeronasal 1 receptor, E1 (V1re1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]		
Mus musculus	Riken	ILMN_206912	ILMN_206912	A130062I03RIK	ri|A130062I03|PX00123N21|AK079494|2562					AK079494	A130062I03Rik		ILMN_1217426	001500537	S	2439	CATCAGAACCAGAGGGGGCTGGAAGGGGTGTGTGTTTCCCAGTTGAGTGC										
Mus musculus	RefSeq	ILMN_258652	ILMN_258652	C530028I08RIK	NM_001033314.1	NM_001033314.1		232933	75677483	NM_001033314.1	C530028I08Rik	NP_001028486.1	ILMN_3041258	003460746	I	382	GGAGGACCGGATGACAGCTGACCAGTGGCGTGGAGAGTTTGATGCCAACT	7	-	18062073-18062074:18062304-18062351	7qA3	Mus musculus RIKEN cDNA C530028I08 gene (C530028I08Rik), mRNA.				Gm159	Gm159
Mus musculus	RefSeq	ILMN_258652	ILMN_258652	C530028I08RIK	NM_001033314.1	NM_001033314.1		232933	75677483	NM_001033314.1	C530028I08Rik	NP_001028486.1	ILMN_3116014	004920039	A	1728	GCTCCGACTTCCAGGGAGCTGACATGGCTGAAATAGATGCCCGCCTGAAG	7	-	18049638-18049687	7qA3	Mus musculus RIKEN cDNA C530028I08 gene (C530028I08Rik), mRNA.				Gm159	Gm159
Mus musculus	Riken	ILMN_206009	ILMN_206009	B130051A04RIK	ri|B130051A04|PX00158G18|AK045246|2877					AK045246	B130051A04Rik		ILMN_1238430	002970204	S	2774	TAGAGATACAGGCAGGTGGAGTTCTCTGGGTCTGTGGCCAGCTTGGCTCT										
Mus musculus	RefSeq	ILMN_210015	ILMN_210015	PIK3IP1	NM_178149.4	NM_178149.4		216505	111120320	NM_178149.4	Pik3ip1	NP_835362.2	ILMN_2769772	000940180	S	1558	CTGGGCCCGAGGGTCTCTTCCTATCTCGTAAGGAAAGGGAAGAATTGCAC	11	+	3242289-3242338	11qA1	Mus musculus phosphoinositide-3-kinase interacting protein 1 (Pik3ip1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-191E3.6; Hgfl; 1500004A08Rik; Crkd	RP23-191E3.6; Hgfl; 1500004A08Rik; Crkd
Mus musculus	MEEBO	ILMN_185006	ILMN_185006	SLAC2B	scl36950.1.1_88				31341147	NM_176846	Slac2b		ILMN_2717314	001940494	S	5640	GAGCAGCAGTTGGCTTTCTTGGAGAACGTCAAACGCTCACTCACACAGGG										
Mus musculus	Riken	ILMN_207241	ILMN_207241	F730035P03RIK	ri|F730035P03|PL00003H13|AK089468|869					AK089468	F730035P03Rik		ILMN_1224040	002680392	S	513	CCCTTGCATCCCAACTCCTAAAGATCGTGTCAGAAGGGGAGGATTCTGGG										
Mus musculus	RefSeq	ILMN_200562	ILMN_245453	EG546894	XM_621703.4	XM_621703.4		546894	149254870	XM_621703.4	EG546894	XP_621703.4	ILMN_1260275	006960554	S	2025	CGGCCAGGAGCCAGATAAGGACAGGAATGAGGGTGAATCCTCATCTCTCT	6	-	23107987-23108036	6qA3.1	PREDICTED: Mus musculus predicted gene, EG546894 (EG546894), mRNA.					
Mus musculus	Riken	ILMN_203745	ILMN_203745	DSC1	ri|9930022D13|PX00120E24|AK036893|2874					AK036893	Dsc1		ILMN_1234954	004200470	S	2502	GCGCTGTGAGGTAGGGACGAAAACTTTAACACATGGACCACCCAGGGCAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197397	ILMN_197397	LOC218726	XM_127573.4	XM_127573.4			38075568	XM_127573.4	LOC218726		ILMN_2527994	004560672	S	525	CCCAGCTGCCTACGTTGGTATCTATGACACTGCAAAGGGAATGATTCCAC										
Mus musculus	RefSeq	ILMN_213963	ILMN_213963	RNF128	NM_023270.4	NM_023270.4		66889	142378619	NM_023270.4	Rnf128	NP_075759.2	ILMN_2642781	000010379	S	2087	ATCAGTATATTAGTGACACCACACAAGATTATAGACATAAAAAGTTTCTT	X	+	136207021-136207070	XqF1	Mus musculus ring finger protein 128 (Rnf128), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42036] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISA]	1300002C13Rik; GRAIL; AI987883; Greul1	1300002C13Rik; GRAIL; AI987883; Greul1
Mus musculus	RefSeq	ILMN_235584	ILMN_235584	CYP2D12	NM_201360.1	NM_201360.1		380997	51100967	NM_201360.1	Cyp2d12	NP_958748.1	ILMN_2875737	002630242	S	1541	GTGATACGTGAGCAAGGACACTAATTCCATACAGGCTCTGCAGGGAAGGC	15	+	82389760-82389783:82389784-82389809	15qE1	Mus musculus cytochrome P450, family 2, subfamily d, polypeptide 12 (Cyp2d12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_217157	ILMN_217157	TM2D2	NM_027194.2	NM_027194.2		69742	141802111	NM_027194.2	Tm2d2	NP_081470.1	ILMN_2679723	001240279	S	1032	CCAGGATAAACCAAGTGAGTGTTTATCCACTCACAGCCTTTCGTGACCCT	8	+	26133552-26133601	8qA2	Mus musculus TM2 domain containing 2 (Tm2d2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2410018G23Rik; Blp1	2410018G23Rik; Blp1
Mus musculus	MEEBO	ILMN_192689	ILMN_192689	1110001C20RIK	scl24581.5_217				31343175	NM_177730	1110001C20Rik		ILMN_2667045	003870437	S	4406	GGCCTTCCTGGGACAACCTGGAAGGTCAAAGCAAGAACTCTTGAGATTAT										
Mus musculus	RefSeq	ILMN_202799	ILMN_249263	STARD9	XM_001004201.2	XM_001004201.2		668880	149249974	XM_001004201.2	Stard9	XP_001004201.2	ILMN_1254226	004590373	S	10458	GAATGACCAAAGTTCAAATGAGCTGCCTCTGGTTGGAGGGAGTGCCACCG	2	+	120529361-120529410	2qE5	PREDICTED: Mus musculus START domain containing 9 (Stard9), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189236	ILMN_249263	STARD9	XM_001004201.2	XM_001004201.2		668880	149249974	XM_001004201.2	Stard9	XP_001004201.2	ILMN_2459519	002060196	S	6178	CAGGACTTAGAGGACCAGGAGAAGGCGGACCATGTCCCTACGCCAGAAAG	2	+	120525081-120525130	2qE5	PREDICTED: Mus musculus START domain containing 9 (Stard9), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195606	ILMN_249263	STARD9	XM_001004201.2	XM_001004201.2		668880	149249974	XM_001004201.2	Stard9	XP_001004201.2	ILMN_2517079	007400482	S	14800	CCTGGTTGAACACTCTGAAGATTTTCCATGTTGATTCAGAAATGGTAGGG	2	+	120541420-120541469	2qE5	PREDICTED: Mus musculus START domain containing 9 (Stard9), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189029	ILMN_249263	STARD9	XM_001004201.2	XM_001004201.2		668880	149249974	XM_001004201.2	Stard9	XP_001004201.2	ILMN_1241057	000130307	S	722	TCACAGCAGCCACCCATGTTCACGAGGCCAGCAGCAGATCCCATGCCATC	2	+	120499341-120499390	2qE5	PREDICTED: Mus musculus START domain containing 9 (Stard9), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_227368	ILMN_227368	NKAIN2	NM_001025286.1	NM_001025286.1		432450	70778939	NM_001025286.1	Nkain2	NP_001020457.1	ILMN_3092427	006980497	A	320	ATATAGACCTCGTTACGTAACAGGATATGCTGTCTGGCTAGTTCTCTGGG	10	-	32049626-32049651:32122042-32122065	10qA4	Mus musculus Na+/K+ transporting ATPase interacting 2 (Nkain2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			NKAIN2; 6330571D19Rik; AW455467	NKAIN2; 6330571D19Rik; AW455467
Mus musculus	RefSeq	ILMN_203460	ILMN_227368	NKAIN2	NM_001025286.1	NM_001025286.1		432450	70778939	NM_001025286.1	Nkain2	NP_001020457.1	ILMN_1254298	003990400	S	61	TCCTGTCCTTCCCCACGATCTGATTGGATAAACTGGGGCCTCGACGGTGG	10	-	32609544-32609593	10qA4	Mus musculus Na+/K+ transporting ATPase interacting 2 (Nkain2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			NKAIN2; 6330571D19Rik; AW455467	NKAIN2; 6330571D19Rik; AW455467
Mus musculus	RefSeq	ILMN_213736	ILMN_245982	LAMA5	NM_001081171.2	NM_001081171.2		16776	147904403	NM_001081171.2	Lama5	NP_001074640.1	ILMN_2640248	001410768	S	10938	CCGTTTGCCAGAGAGCTTGGCTGGTTCTCCAGCACTTCTGCACCTCGGGA				2qH4	Mus musculus laminin, alpha 5 (Lama5), mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A laminin complex composed of alpha5, beta1 and gamma1 polypeptide chains [goid 43259] [evidence IPI]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]; The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity [goid 7431] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process by which the anatomical structures of polarized epithelium are generated and organized. Morphogenesis pertains to the creation of form. A polarized epithelium is an epithelium where the epithelial sheet is oriented with respect to the planar axis [goid 1738] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]	Interacting selectively with an integrin [goid 5178] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA408760; AI853660; AA408762; mKIAA0533; [a]5	AA408760; AI853660; AA408762; mKIAA0533; [a]5
Mus musculus	RefSeq	ILMN_217042	ILMN_217042	MAT1A	NM_133653.2	NM_133653.2		11720	118130982	NM_133653.2	Mat1a	NP_598414.1	ILMN_2678460	000050379	S	2937	GATGCTGTGTGTGACTTAGAAGCTTGAGTCTTTCCATAGGGTTCGGAGCT	14	+	41937430-41937479	14qB	Mus musculus methionine adenosyltransferase I, alpha (Mat1a), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine [goid 4478] [evidence TAS]	SAMS1; AI046368; SAMS; Ams; MAT; MATA1; AdoMet	SAMS1; AI046368; SAMS; Ams; MAT; MATA1; AdoMet
Mus musculus	RefSeq	ILMN_185265	ILMN_236051	4930589O11RIK	XM_923354.3	XM_923354.3		78214	149253751	XM_923354.3	4930589O11Rik	XP_928447.1	ILMN_1250395	005490326	S	2918	CCCATGTAAGAAAGGACGGGAAATACCAGCAAATTGAAGTGTGGAGCCTG				5qC3.1	PREDICTED: Mus musculus RIKEN cDNA 4930589O11 gene (4930589O11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_191911	ILMN_191911	LYVE1	NM_053247.4	NM_053247.4		114332	118131124	NM_053247.4	Lyve1	NP_444477.2	ILMN_2483304	004880201	S	2282	CTGATATTACTCAACACATTCTCATGTATAGCGGAGTGTGGGCTGAAGCT	7	-	117994396-117994445	7qF1	Mus musculus lymphatic vessel endothelial hyaluronan receptor 1 (Lyve1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars [goid 6027] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IDA]	Lyve-1; Xlkd1; Crsbp-1; 1200012G08Rik	Lyve-1; Xlkd1; Crsbp-1; 1200012G08Rik
Mus musculus	RefSeq	ILMN_213846	ILMN_213846	EMR1	NM_010130.1	NM_010130.1		13733	33859545	NM_010130.1	Emr1	NP_034260.1	ILMN_2847787	002710110	S	2989	CCAAACTCCAGGAGTTTCATGCACCAAGGAGAAACACAGGATATCTACCC	17	+	57168613-57168662	17qD	Mus musculus EGF-like module containing, mucin-like, hormone receptor-like sequence 1 (Emr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Ly71; EGF-TM7; F4/80; TM7LN3; Gpf480; DD7A5-7	Ly71; EGF-TM7; F4/80; TM7LN3; Gpf480; DD7A5-7
Mus musculus	Riken	ILMN_204428	ILMN_204428	TRIM6	ri|A430041K04|PX00135O12|AK040000|1491					AK040000	Trim6		ILMN_1255191	004780546	S	1194	GAACCATAAGTATGCCAGGTGCATAAGGAGGCCAGAAGTTCCCTCTTCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_227442	ILMN_227442	PROK1	NM_001044382.1	NM_001044382.1		246691	117676356	NM_001044382.1	Prok1	NP_001037847.1	ILMN_2886025	003990575	S	327	CGGACGGCAGGTACCGCTGCTTCCGGGACTTGAAGAATGCCAACTTTTAG	3	-	107038486-107038486:107038487-107038535	3qF2.3	Mus musculus prokineticin 1 (Prok1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IDA]		EG-VEGF	EG-VEGF
Mus musculus	RefSeq	ILMN_211321	ILMN_211321	C87436	NM_146170.3	NM_146170.3		232196	142384996	NM_146170.3	C87436	NP_666282.2	ILMN_1229035	006020152	S	1724	GTAGCTTTATCCAGAACCGGGATGGAACTTACGAGCTGTTTAAATGCCCC	6	+	86415814-86415863	6qD1	Mus musculus expressed sequence C87436 (C87436), mRNA.				MGC25529	MGC25529
Mus musculus	Riken	ILMN_205699	ILMN_205699	B430205M18RIK	ri|B430205M18|PX00071E06|AK046612|1883					AK046612	B430205M18Rik		ILMN_1239902	000990402	S	432	GGCGGCGGGCGGACCCTGTACTATGGCTGTGTACTGCCTATGCCCTCAAT										
Mus musculus	RefSeq	ILMN_218956	ILMN_241963	DEFB36	NM_001037247.2	NM_001037247.2		266620	142368751	NM_001037247.2	Defb36	NP_001032324.1	ILMN_2702382	005670577	S	109	TCCCACGATGAAGCTCCTGCTGCTGACTTTGGCTGCGCTCCTGCTCGTGT	2	+	152430217-152430223:152430224-152430266	2qH1	Mus musculus defensin beta 36 (Defb36), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defb123	Defb123
Mus musculus	RefSeq	ILMN_213434	ILMN_213434	PPP2R2D	NM_026391.2	NM_026391.2		52432	42734457	NM_026391.2	Ppp2r2d	NP_080667.1	ILMN_1218424	000730497	S	1501	GACCAAGTGTTGTCTTGCATATGTACGCCGGTCAATTAGTTTTCCTGTCA	7	+	146074187-146074236	7qF4	Mus musculus protein phosphatase 2, regulatory subunit B, delta isoform (Ppp2r2d), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]	MDS026; D7Ertd753e; 1300017E19Rik	MDS026; D7Ertd753e; 1300017E19Rik
Mus musculus	RefSeq	ILMN_209837	ILMN_209837	GLDN	NM_177350.4	NM_177350.4		235379	146198849	NM_177350.4	Gldn	NP_796324.1	ILMN_2599692	001260021	S	4439	GTCACTCGTCATCCTCCAAGCATAGCAAGTACCTTACTCAGGCATTGCCT				9qA5.3	Mus musculus gliomedin (Gldn), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CRG-L2; Crlg2; Clom; Colm; Crgl2	CRG-L2; Crlg2; Clom; Colm; Crgl2
Mus musculus	RefSeq	ILMN_201793	ILMN_231920	0610030E20RIK	XM_921694.2	XM_921694.2		68364	94377646	XM_921694.2	0610030E20Rik	XP_926787.1	ILMN_2544634	002190551	S	839	TAAGGTAGCTGGGACCCGGCCAGGAAACGCTGTCCACCAGTGTGATCTAT				6qC1	PREDICTED: Mus musculus RIKEN cDNA 0610030E20 gene, transcript variant 9 (0610030E20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218792	ILMN_218792	H13	NM_010376.3	NM_010376.3		14950	142360213	NM_010376.3	H13	NP_034506.1	ILMN_2700292	002760093	S	827	GCTGGAGAAGGGCCTTGAAGCAGACAACTTTGCCATGCTGGGACTTGGAG	2	+	152517548-152517597	2qH1	Mus musculus histocompatibility 13 (H13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	Spp; H-13; AV020344; 4930443L17Rik; 1200006O09Rik; 5031424B04Rik; PSL3	Spp; H-13; AV020344; 4930443L17Rik; 1200006O09Rik; 5031424B04Rik; PSL3
Mus musculus	RefSeq	ILMN_218792	ILMN_218792	H13	NM_010376.3	NM_010376.3		14950	142360213	NM_010376.3	H13	NP_034506.1	ILMN_1212794	006860253	S	3114	GACCATCCCTGCAAGAAACCCCATACTCTATACATGCTTACCGGGTTAGC	2	+	152532354-152532403	2qH1	Mus musculus histocompatibility 13 (H13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	Spp; H-13; AV020344; 4930443L17Rik; 1200006O09Rik; 5031424B04Rik; PSL3	Spp; H-13; AV020344; 4930443L17Rik; 1200006O09Rik; 5031424B04Rik; PSL3
Mus musculus	RefSeq	ILMN_218792	ILMN_218792	H13	NM_010376.3	NM_010376.3		14950	142360213	NM_010376.3	H13	NP_034506.1	ILMN_2742160	006130131	S	680	CCTGCACCTGAACAACGTGAGCACTGGCTGTATCCTGCTCGGAGGACTCT	2	+	152514629-152514678	2qH1	Mus musculus histocompatibility 13 (H13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	Spp; H-13; AV020344; 4930443L17Rik; 1200006O09Rik; 5031424B04Rik; PSL3	Spp; H-13; AV020344; 4930443L17Rik; 1200006O09Rik; 5031424B04Rik; PSL3
Mus musculus	RefSeq	ILMN_217725	ILMN_217725	NCBP2	NM_026554.2	NM_026554.2		68092	31560153	NM_026554.2	Ncbp2	NP_080830.1	ILMN_2788263	005360138	S	1447	GAGTCTGAAAATTGGGAGAGAAAACCTACTCTAGGAGCCTCTGGTTACAC	16	+	31877722-31877771	16qB2	Mus musculus nuclear cap binding protein subunit 2 (Ncbp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	C79367; 20kDa; AI843301; AA536802; 5930413E18Rik	C79367; 20kDa; AI843301; AA536802; 5930413E18Rik
Mus musculus	RefSeq	ILMN_217725	ILMN_217725	NCBP2	NM_026554.2	NM_026554.2		68092	31560153	NM_026554.2	Ncbp2	NP_080830.1	ILMN_2788260	001230615	S	1333	GTGAATCTGCCTCACAATCGGAACTTAAAGGGGCAGGGGAAGGTGCCAGG	16	+	31877608-31877657	16qB2	Mus musculus nuclear cap binding protein subunit 2 (Ncbp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	C79367; 20kDa; AI843301; AA536802; 5930413E18Rik	C79367; 20kDa; AI843301; AA536802; 5930413E18Rik
Mus musculus	RefSeq	ILMN_215824	ILMN_215824	RNF186	NM_025786.2	NM_025786.2		66825	110681694	NM_025786.2	Rnf186	NP_080062.3	ILMN_2663996	006040717	S	1125	CTCAAGGGTGGTGGGGTCCCTACCCCTATTCCAGAGCTCCTAAGTTTTGT	4	+	138524156-138524205	4qD3	Mus musculus ring finger protein 186 (Rnf186), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9130020G10Rik	9130020G10Rik
Mus musculus	RefSeq	ILMN_249964	ILMN_249964	RDH12	NM_030017.1	NM_030017.1		77974	58037512	NM_030017.1	Rdh12	NP_084293.1	ILMN_2836501	007000376	S	1394	GCTTACACGCTCACAGGGACACCGGCATCACACATTTCTATTCCCTCCAG	12	+	80141221-80141270	12qC3	Mus musculus retinol dehydrogenase 12 (Rdh12), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	A930033N07Rik	A930033N07Rik
Mus musculus	RefSeq	ILMN_234490	ILMN_234490	LOC554327	NM_001033118.1	NM_001033118.1		554327	75677390	NM_001033118.1	LOC554327	NP_001028290.1	ILMN_2814258	000110685	S	644	ACAACAGTGTGAAATAGTCCAGCAGAAGGCAGAACATGGCACAGACCACG	14	+	3749274-3749293:3751834-3751843:3751844-3751863	14qA1	Mus musculus hypothetical protein LOC554327 (LOC554327), mRNA.					
Mus musculus	RefSeq	ILMN_219033	ILMN_219033	ALDH1L1	NM_027406.1	NM_027406.1		107747	27532958	NM_027406.1	Aldh1l1	NP_081682.1	ILMN_3027287	002030332	I	1556	GGCCTTTGAGAATGGACTGTGGGGAAAGATAAATGCGCGTGACCGGGGCC	6	+	90521926-90521975	6qD1	Mus musculus aldehyde dehydrogenase 1 family, member L1 (Aldh1l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate [goid 9258] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + NADP+ + H2O = tetrahydrofolate + CO2 + NADPH + H+ [goid 16155] [evidence IEA];  [goid 16742] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]	Fthfd; 1810048F20Rik	Fthfd; 1810048F20Rik
Mus musculus	RefSeq	ILMN_219033	ILMN_219033	ALDH1L1	NM_027406.1	NM_027406.1		107747	27532958	NM_027406.1	Aldh1l1	NP_081682.1	ILMN_3100276	000380754	A	2423	GGAGTATTGCCAACGTGGTGTGAAGGAAGGGGCCACACTGGTCTGTGGTG	6	+	90544572-90544621	6qD1	Mus musculus aldehyde dehydrogenase 1 family, member L1 (Aldh1l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate [goid 9258] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + NADP+ + H2O = tetrahydrofolate + CO2 + NADPH + H+ [goid 16155] [evidence IEA];  [goid 16742] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]	Fthfd; 1810048F20Rik	Fthfd; 1810048F20Rik
Mus musculus	RefSeq	ILMN_185590	ILMN_314321	SYNE2	NM_001005510.2	NM_001005510.2		319565	145699090	NM_001005510.2	Syne2	NP_001005510.2	ILMN_1232181	005090056	S	2888	TCGAGCTGTTGAAGAACTGAAGCGTACTGTCCCCGGTGGTGCGAAGCTGC				12qC3	Mus musculus synaptic nuclear envelope 2 (Syne2), mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nesp2g; NUA; AW546258; mKIAA1011; MGC96690; 6820443O06Rik; D12Ertd777e	Nesp2g; NUA; AW546258; mKIAA1011; MGC96690; 6820443O06Rik; D12Ertd777e
Mus musculus	RefSeq	ILMN_191836	ILMN_314321	SYNE2	NM_001005510.2	NM_001005510.2		319565	145699090	NM_001005510.2	Syne2	NP_001005510.2	ILMN_2482651	006040750	S	2989	ATGAAATTTCTTTGTATCTCCAACAACTAAAAATAGCTATTGAAGAAGAA				12qC3	Mus musculus synaptic nuclear envelope 2 (Syne2), mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nesp2g; NUA; AW546258; mKIAA1011; MGC96690; 6820443O06Rik; D12Ertd777e	Nesp2g; NUA; AW546258; mKIAA1011; MGC96690; 6820443O06Rik; D12Ertd777e
Mus musculus	RefSeq	ILMN_185590	ILMN_314321	SYNE2	NM_001005510.2	NM_001005510.2		319565	145699090	NM_001005510.2	Syne2	NP_001005510.2	ILMN_2428311	006840008	S	21398	AAGGAAATTTTATTGCATGGATGTCGTTATTTGTGCATATTTTTTAACAA				12qC3	Mus musculus synaptic nuclear envelope 2 (Syne2), mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nesp2g; NUA; AW546258; mKIAA1011; MGC96690; 6820443O06Rik; D12Ertd777e	Nesp2g; NUA; AW546258; mKIAA1011; MGC96690; 6820443O06Rik; D12Ertd777e
Mus musculus	RefSeq	ILMN_206465	ILMN_314321	SYNE2	NM_001005510.2	NM_001005510.2		319565	145699090	NM_001005510.2	Syne2	NP_001005510.2	ILMN_1215572	005490386	S	1721	GGATGTCTGGAACGGCACTTATGAGAGCAAGGAGTCTGTGGAAGTCCTGC				12qC3	Mus musculus synaptic nuclear envelope 2 (Syne2), mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nesp2g; NUA; AW546258; mKIAA1011; MGC96690; 6820443O06Rik; D12Ertd777e	Nesp2g; NUA; AW546258; mKIAA1011; MGC96690; 6820443O06Rik; D12Ertd777e
Mus musculus	MEEBO	ILMN_223194	ILMN_223194	2900057K09RIK	scl30996.1.1917_2	NM_175388.2			31341758	NM_175388.2	2900057K09Rik		ILMN_2760568	004890286	S	1104	GGGACTTGGGACAAGGTATGCCCTGTCAGGGATGCTTTTACCACAAAGGA										
Mus musculus	MEEBO	ILMN_224132	ILMN_224132	MAPKAPK3	scl35378.12_17				31542088	NM_178907	Mapkapk3		ILMN_2775360	005360477	S	2455	GTCGCACTTGGCTCCCTGTTTGTTATCTAGGACCTTTTCTGGTACTCTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185851	ILMN_185851	TWSG1	NM_023053.2	NM_023053.2		65960	141802034	NM_023053.2	Twsg1	NP_075540.1	ILMN_1235253	000450348	S	2169	AAGCATGAATCAAAAACAAATATCTATAATACACAGGTTCAATTTTATAG	17	-	66274176-66274225	17qE1.1	Mus musculus twisted gastrulation homolog 1 (Drosophila) (Twsg1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity [goid 30513] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IGI]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9030422N06Rik; AW552143; 1810013J15Rik; D17Ertd403e; Twg; Tsg	9030422N06Rik; AW552143; 1810013J15Rik; D17Ertd403e; Twg; Tsg
Mus musculus	RefSeq	ILMN_185851	ILMN_185851	TWSG1	NM_023053.2	NM_023053.2		65960	141802034	NM_023053.2	Twsg1	NP_075540.1	ILMN_2463979	003310441	S	3632	GAGTAGAATGTACTGTTCACACAGCGTGTTGTGAAAGGGGTCCTCACACC	17	-	66272713-66272762	17qE1.1	Mus musculus twisted gastrulation homolog 1 (Drosophila) (Twsg1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity [goid 30513] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IGI]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9030422N06Rik; AW552143; 1810013J15Rik; D17Ertd403e; Twg; Tsg	9030422N06Rik; AW552143; 1810013J15Rik; D17Ertd403e; Twg; Tsg
Mus musculus	RefSeq	ILMN_218449	ILMN_323224	LOC100046275	XM_001475919.1	XM_001475919.1		100046275	149274920	XM_001475919.1	LOC100046275	XP_001475969.1	ILMN_1219434	004260735	S	188	GAAAGGGTCTGGAGTGGCTGGCACACATTTACTGGGATGATGACAAGCGC					PREDICTED: Mus musculus similar to Igha protein (LOC100046275), mRNA.					
Mus musculus	RefSeq	ILMN_213066	ILMN_213066	ASB6	NM_133346.2	NM_133346.2		72323	115311559	NM_133346.2	Asb6	NP_579924.1	ILMN_1252320	004850528	S	563	CCTGCCTGCAGCGCCTCTTGGATCTTGGAGCAGATGTCAATGCAGCTGAC	2	-	30680978-30681027	2qB	Mus musculus ankyrin repeat and SOCS box-containing 6 (Asb6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		2510004M11Rik; AA409356	2510004M11Rik; AA409356
Mus musculus	RefSeq	ILMN_213066	ILMN_213066	ASB6	NM_133346.2	NM_133346.2		72323	115311559	NM_133346.2	Asb6	NP_579924.1	ILMN_1254737	006480561	S	1750	CCATTCAGTAAGGCCCTACCCATTCATTCTGCCGCCTCGGGTCTCATGAT	2	-	30678931-30678980	2qB	Mus musculus ankyrin repeat and SOCS box-containing 6 (Asb6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		2510004M11Rik; AA409356	2510004M11Rik; AA409356
Mus musculus	MEEBO	ILMN_193759	ILMN_193759	4733401I05RIK	scl0070848.1_225						4733401I05Rik		ILMN_2500157	002070246	S	6	GAAGTGCCGCATTAAAATAACGTCTGGAGTCCCAGGGTGCCTTGTCCGCC										
Mus musculus	MEEBO	ILMN_186901	ILMN_186901	9629553_1729	9629553_1729						9629553_1729		ILMN_1224289	006900100	S	4	TCATGGCAGAGTATGAAGAGTGGCACAAGTCTCCCATGCTCAAGTATGTG										
Mus musculus	RefSeq	ILMN_221591	ILMN_221591	OLFR60	NM_146955.1	NM_146955.1		18361	22203808	NM_146955.1	Olfr60	NP_667166.1	ILMN_2737550	003400292	S	578	CATACGTAAACAGCATTATGACTCTAATAGCAGATGTCTTCTATGGAGGC	7	-	147531259-147531308	7qF4	Mus musculus olfactory receptor 60 (Olfr60), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123562; IH6; MGC123563; MOR253-6	MGC123562; IH6; MGC123563; MOR253-6
Mus musculus	RefSeq	ILMN_223487	ILMN_223487	ACTN2	NM_033268.3	NM_033268.3		11472	59709448	NM_033268.3	Actn2	NP_150371.3	ILMN_2797061	001050678	S	2779	GCTTCGTCGAGAGCTGCCTCCGGATCAGGCCCAGTACTGCATCAAGAGAA	13	-	12361849-12361898	13qA1	Mus musculus actinin alpha 2 (Actn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils [goid 5865] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IPI]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 30375] [evidence IDA];  [goid 30374] [evidence IDA]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with Z-band alternatively spliced PDZ motif protein (ZASP). ZASP is a Z-band protein specifically expressed in heart and skeletal muscle. This protein contains N-terminal PDZ domain and C-terminal LIM domain [goid 51370] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence TAS]	MGC107582; 1110008F24Rik	MGC107582; 1110008F24Rik
Mus musculus	MEEBO	ILMN_211015	ILMN_211015	A930025A13RIK	scl49736.1.1929_187	NM_177196.2			31343039	NM_177196.2	A930025A13Rik		ILMN_2611605	005670601	S	1867	GCTTCTATGCCATCCCTGTAATACTAGGACTGGACCTAATAGTCTTCCTC										
Mus musculus	MEEBO	ILMN_214059	ILMN_214059	2900093K20RIK	scl19963.1.70_73				51707120	XM_488984	2900093K20Rik		ILMN_1221258	001450465	S	1415	CCAAGAAGGTATTAATTGGACGAGGCCCAGGCGGTGGATGCTGCCCGGAA										
Mus musculus	RefSeq	ILMN_209880	ILMN_209880	CTS3	NM_026906.2	NM_026906.2		117066	19424143	NM_026906.2	Cts3	NP_081182.2	ILMN_2850260	005090544	S	1159	GGCACTTCCATTTCAAAACAGCGGGTCACTGCAGTGAATATGAGACACTG	13	-	61666162-61666211	13qB3	Mus musculus cathepsin 3 (Cts3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC117532; 1600000I23Rik	MGC117532; 1600000I23Rik
Mus musculus	Riken	ILMN_203481	ILMN_203481	6430562A12RIK	ri|6430562A12|PX00047N03|AK032481|2997					AK032481	6430562A12Rik		ILMN_2557626	006560224	S	2830	GCGAAATGCCTCAGATTGCAGGACACTAGAGTGGGACTCAGTCAAAGGTG										
Mus musculus	RefSeq	ILMN_212774	ILMN_212774	SYP	NM_009305.1	NM_009305.1		20977	6678194	NM_009305.1	Syp	NP_033331.1	ILMN_2630182	000990392	S	2159	GGACCCTCTGCTGTGTCTGTGACGTTGGTAGTGCCTGTGATCGTGTGTTG	X	+	7230190-7230239	XqA1.1	Mus musculus synaptophysin (Syp), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; Penetrating at least one phospholipid bilayer of a synaptic vesicle membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30285] [evidence TAS]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISO]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence ISO]	p38; Syn; AI848995; A230093K24Rik	p38; Syn; AI848995; A230093K24Rik
Mus musculus	RefSeq	ILMN_194129	ILMN_232861	ADARB2	NM_052977.4	NM_052977.4		94191	142366571	NM_052977.4	Adarb2	NP_443209.2	ILMN_2503671	006350592	S	4180	GCAGATGTCACAAGAATTTGGTAAACATGAAATACATTCAATTGTAGCTA	13	+	8758278-8758327	13qA1	Mus musculus adenosine deaminase, RNA-specific, B2 (Adarb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	RED2; Adar3	RED2; Adar3
Mus musculus	RefSeq	ILMN_216941	ILMN_216941	TTC26	NM_153600.2	NM_153600.2		264134	42734470	NM_153600.2	Ttc26	NP_705828.2	ILMN_2677233	005810440	S	3757	CCTTGAGAGAAGACGGTCTGTCCCCAACAGCAGAATTTTAGATTACTGTT	6	+	38377264-38377313	6qB1	Mus musculus tetratricopeptide repeat domain 26 (Ttc26), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	9430097H08Rik; MGC28016	9430097H08Rik; MGC28016
Mus musculus	RefSeq	ILMN_197819	ILMN_197819	LOC230416	XM_143884.2	XM_143884.2			38078499	XM_143884.2	LOC230416		ILMN_2529477	005670196	S	352	GTCCCACCACTGAGTGAGAAAGCTCCTATAGTCCCACCACTGATTGAGAG										
Mus musculus	RefSeq	ILMN_214893	ILMN_214893	SEPX1	NM_013759.2	NM_013759.2		27361	110832840	NM_013759.2	Sepx1	NP_038787.1	ILMN_1257142	004010343	S	824	CCCCCCTTGATTGCTCTCTGGGATGATCAAGTAGAAGTCAATAAACATGC	17	+	24879661-24879710	17qA3.3	Mus musculus selenoprotein X 1 (Sepx1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues [goid 30091] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin [goid 8113] [evidence IEA]; Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on oxidized methionine in peptide linkage with specificity for the R enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 318] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Sepr; SelR; MsrB1; SELX; D17Wsu82e	Sepr; SelR; MsrB1; SELX; D17Wsu82e
Mus musculus	RefSeq	ILMN_200581	ILMN_200581	LOC381754	XM_355749.1	XM_355749.1			38083919	XM_355749.1	LOC381754		ILMN_1212852	002900689	S	500	GGTGCTAAGAGTTTGGTCCCTGGTGTGATGATGGGGAGAGAGGATGGGGC										
Mus musculus	MEEBO	ILMN_184584	ILMN_184584	E230020D15RIK	scl00319744.1_306						E230020D15Rik		ILMN_2419858	003890008	S	3	GCCTAATGAGGAGTCCTTGCCTGTGCAAATCACCACAGAGTTAGGAGTAA										
Mus musculus	MEEBO	ILMN_215779	ILMN_215779	4931407J08RIK	scl48601.1.3_216	XM_148433.1			20892216	XM_148433.1	4931407J08Rik		ILMN_1227492	007200286	S	1309	GTGGTCTCCTGATATGGATTTTTTCTCCGATAGTAGCTAAGCATGGGACC										
Mus musculus	MEEBO	ILMN_217192	ILMN_217192	4933409N07RIK	scl34845.7_126	NM_175162.2			31340966	NM_175162.2	4933409N07Rik		ILMN_2680102	000060463	S	2286	ACAACGTCTCTGATGACGACGACTCCGAGGAGGGGGCCAACAAAAACGCG										
Mus musculus	RefSeq	ILMN_201049	ILMN_201049	LOC384730	XM_357824.1	XM_357824.1			38088156	XM_357824.1	LOC384730		ILMN_2540900	002120022	S	294	CAATGACAGCACTCTCTACCCATGGCCCCCTCCTACCTTCACTGTTGGAA										
Mus musculus	RefSeq	ILMN_219523	ILMN_219523	ORF9	NM_020622.1	NM_020622.1		52793	22296879	NM_020622.1	ORF9	NP_065647.1	ILMN_2789762	001230653	S	571	GGAAGTTCCAAACTGAAGGCTCAAGCAAAGGATGCCATAGAAGCCCTTGG	16	-	97580250-97580290:97580645-97580653	16qC4	Mus musculus open reading frame 9 (ORF9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence ISA]	The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence NAS]	2-21; 9030624C24Rik; D16Jhu19e; FAM3B	2-21; 9030624C24Rik; D16Jhu19e; FAM3B
Mus musculus	MEEBO	ILMN_223799	ILMN_223799	IGSF9	scl17196.19_30				24475735	NM_033608	Igsf9		ILMN_1243523	005220138	S	3502	TGGCCCAGAAAGGTGGCCCCGCAGGGAGCATGTGGTGACAGTCAGCAAAA						A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]			
Mus musculus	RefSeq	ILMN_229282	ILMN_229282	3321401G04RIK	NM_029930.1	NM_029930.1		77574	58037490	NM_029930.1	3321401G04Rik	NP_084206.1	ILMN_2937425	005810484	S	3395	CCCACAGCTCAGAAGTTCACATCAGCCTTTCTCTTAGACTCCTTCTGCCC	6	-	42602447-42602496	6qB2.1	Mus musculus RIKEN cDNA 3321401G04 gene (3321401G04Rik), mRNA.				A230020K05Rik; AI848529; KIAA0738; 2810407D09Rik	A230020K05Rik; AI848529; KIAA0738; 2810407D09Rik
Mus musculus	Riken	ILMN_204950	ILMN_204950	CRADD	ri|D330023M19|PX00191J10|AK052304|2665					AK052304	Cradd		ILMN_1253258	000770072	S	2288	GCGCACAGGAATCCTAGAGTAGAGATCAGCCTTATGCTGAGTCAGGCACC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_204355	ILMN_204355	C030003K17RIK	ri|C030003K17|PX00073P14|AK047630|2244					AK047630	C030003K17Rik		ILMN_2564336	007040255	S	1748	AGAACCACTCAGCACCTGGGGGAACAAAGAGGCCGGGCAGCCAGAAAGAG										
Mus musculus	RefSeq	ILMN_218391	ILMN_218391	4930524B15RIK	NM_026262.1	NM_026262.1		67592	13385771	NM_026262.1	4930524B15Rik	NP_080538.1	ILMN_2885470	006200025	S	1676	AGCCCAATAGTCTGTTCTTGTGGCAGTGCATTCTGAGAAATGTACCACAG	11	+	31879368-31879417	11qA4	Mus musculus RIKEN cDNA 4930524B15 gene (4930524B15Rik), mRNA.				RP23-71G18.2	RP23-71G18.2
Mus musculus	RefSeq	ILMN_218391	ILMN_218391	4930524B15RIK	NM_026262.1	NM_026262.1		67592	13385771	NM_026262.1	4930524B15Rik	NP_080538.1	ILMN_2695208	006350411	S	1222	GCTCTGTTAGTATGTATGCATTTCACTGTCACGTGAGTGTCACGCTGGAG	11	+	31878914-31878963	11qA4	Mus musculus RIKEN cDNA 4930524B15 gene (4930524B15Rik), mRNA.				RP23-71G18.2	RP23-71G18.2
Mus musculus	Riken	ILMN_206751	ILMN_206751	D830005N24RIK	ri|D830005N24|PX00198B02|AK085766|884					AK085766	D830005N24Rik		ILMN_1232998	001030020	S	521	GCTCGTTTAGGGCGTTTCCCTCATCAGTGTGACTTTGCTTTTGCGCTCAG										
Mus musculus	Riken	ILMN_203065	ILMN_203065	C030005K15RIK	ri|C030005K15|PX00073H10|AK047662|1882					AK047662	C030005K15Rik		ILMN_1259650	002940341	S	1755	CTGAAGGGACCAGTATTGGCTAAACACACCCCAAGACCAAGTACTCAGCC										
Mus musculus	RefSeq	ILMN_216118	ILMN_216118	ACAT3	NM_153151.3	NM_153151.3		224530	112181180	NM_153151.3	Acat3	NP_694791.2	ILMN_2748150	004730328	S	73	CAGACGCCAGGGGAGAGCAACAGGATGAACACAAGATCCGACCCAGTGGT	17	-	13133140-13133166:13133167-13133189	17qA1	Mus musculus acetyl-Coenzyme A acetyltransferase 3 (Acat3), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ACTL	ACTL
Mus musculus	RefSeq	ILMN_211761	ILMN_211761	RABEP1	NM_019400.1	NM_019400.1		54189	9507020	NM_019400.1	Rabep1	NP_062273.1	ILMN_2619286	003440465	S	2582	CCGGGCTATTCTGAATGATACCAAACTGACAGACATTAACCAGCTCCCTG	11	+	70731108-70731157	11qB3-qB4	Mus musculus rabaptin, RAB GTPase binding effector protein 1 (Rabep1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	AV213537; MGC150053; AW240603; AI481320; MGC150054; AA409789; Rab5ep	AV213537; MGC150053; AW240603; AI481320; MGC150054; AA409789; Rab5ep
Mus musculus	RefSeq	ILMN_211761	ILMN_211761	RABEP1	NM_019400.1	NM_019400.1		54189	9507020	NM_019400.1	Rabep1	NP_062273.1	ILMN_2999748	007510424	S	2750	AATGCAAATCTGGAGGGAGAAGGCTGCTGTGTGCAGGGACAGCCAACACC	11	+	70731276-70731284:70732679-70732719	11qB3-qB4	Mus musculus rabaptin, RAB GTPase binding effector protein 1 (Rabep1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	AV213537; MGC150053; AW240603; AI481320; MGC150054; AA409789; Rab5ep	AV213537; MGC150053; AW240603; AI481320; MGC150054; AA409789; Rab5ep
Mus musculus	RefSeq	ILMN_211761	ILMN_211761	RABEP1	NM_019400.1	NM_019400.1		54189	9507020	NM_019400.1	Rabep1	NP_062273.1	ILMN_2999755	004540228	S	2940	CCCAATAGTGTTTGGAATTACGTTTTCTGTTCATACAAACCGGGAGAGAG	11	+	70733687-70733736	11qB3-qB4	Mus musculus rabaptin, RAB GTPase binding effector protein 1 (Rabep1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	AV213537; MGC150053; AW240603; AI481320; MGC150054; AA409789; Rab5ep	AV213537; MGC150053; AW240603; AI481320; MGC150054; AA409789; Rab5ep
Mus musculus	RefSeq	ILMN_209086	ILMN_209086	SDHB	NM_023374.3	NM_023374.3		67680	34328285	NM_023374.3	Sdhb	NP_075863.2	ILMN_2769065	003180075	S	608	TCTGAAGAAGAAGGATGAGTCCCAGGAGGGCAAGCAACAGTATCTGCAGT	4	+	140529623-140529672	4qD3	Mus musculus succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (Sdhb), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing [goid 51538] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: succinate + quinone = fumarate + quinol [goid 8177] [evidence IEA]	0710008N11Rik	0710008N11Rik
Mus musculus	RefSeq	ILMN_209086	ILMN_209086	SDHB	NM_023374.3	NM_023374.3		67680	34328285	NM_023374.3	Sdhb	NP_075863.2	ILMN_2592389	001470709	S	372	AAGATCAAGAATGAAGTGGATTCTACTTTAACCTTCCGAAGATCTTGTAG	4	+	140527083-140527132	4qD3	Mus musculus succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (Sdhb), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing [goid 51538] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: succinate + quinone = fumarate + quinol [goid 8177] [evidence IEA]	0710008N11Rik	0710008N11Rik
Mus musculus	RefSeq	ILMN_209086	ILMN_209086	SDHB	NM_023374.3	NM_023374.3		67680	34328285	NM_023374.3	Sdhb	NP_075863.2	ILMN_2769064	005890743	S	606	ATCTGAAGAAGAAGGATGAGTCCCAGGAGGGCAAGCAACAGTATCTGCAG	4	+	140529621-140529670	4qD3	Mus musculus succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (Sdhb), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing [goid 51538] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: succinate + quinone = fumarate + quinol [goid 8177] [evidence IEA]	0710008N11Rik	0710008N11Rik
Mus musculus	RefSeq	ILMN_186820	ILMN_237493	FUBP3	NM_001033389.2	NM_001033389.2		320267	141802436	NM_001033389.2	Fubp3	NP_001028561.1	ILMN_2438771	006450148	S	3451	CCTGAGGAACATTCCGTTTGAAACGTGCTCGTTACGGTTTGCCGTTCTTG	2	+	31472842-31472891	2qB	Mus musculus far upstream element (FUSE) binding protein 3 (Fubp3), mRNA. XM_924611 XM_924618 XM_924622 XM_924627	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Interacting selectively with single-stranded DNA [goid 3697] [evidence ISO]	MGC118501; A330051M14Rik; AV006371; FBP3	MGC118501; A330051M14Rik; AV006371; FBP3
Mus musculus	RefSeq	ILMN_222319	ILMN_222319	SOX17	NM_011441.2	NM_011441.2		20671	31543757	NM_011441.2	Sox17	NP_035571.1	ILMN_2784446	002940446	S	2936	TAATGAGGCTGTTCAAAAATTTCGGATTTTCAGTCATCTCGACACCTGCC	1	-	4481153-4481202	1qA1	Mus musculus SRY-box containing gene 17 (Sox17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Sox	Sox
Mus musculus	Riken	ILMN_206782	ILMN_206782	E030040E19RIK	ri|E030040E19|PX00206K04|AK087258|2124					AK087258	E030040E19Rik		ILMN_1237020	003370064	S	1169	CCTGAACCCACATGGTTGAAGGAGAGAACTGACCCACACATGACAGATAC										
Mus musculus	MEEBO	ILMN_185893	ILMN_185893	V1RC1	scl0113858.2_86	NM_053231.1			16716544	NM_053231.1	V1rc1		ILMN_1241127	002650400	S	86	TGTCCTGGGTCACAAGACCTAAGCCCACAGACCTGATCTCCTGTCAACTG							The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]		
Mus musculus	MEEBO	ILMN_187909	ILMN_187909	SCL000070.1_2_REVCOMP	scl000070.1_2_REVCOMP						scl000070.1_2_REVCOMP		ILMN_2448175	005390619	S	14	AGAGGCCGACCGGCGCGTAGAGCAGTAGCGCGAGCAGCAGGAAGCCGTCA										
Mus musculus	RefSeq	ILMN_213994	ILMN_213994	ATXN2L	NM_183020.1	NM_183020.1		233871	33942088	NM_183020.1	Atxn2l	NP_898841.1	ILMN_1241354	001240730	S	3337	GGACCAGTCCTAGCCCCGTCCCCAACCCCTTTCCCTTGGGGAGTTGGGGG	7	-	133635553-133635602	7qF3	Mus musculus ataxin 2-like (Atxn2l), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Atxnl2; A2lp; A2LG; A2RP; A2D	Atxnl2; A2lp; A2LG; A2RP; A2D
Mus musculus	MEEBO	ILMN_215599	ILMN_215599	NFIB	scl0002601.1_68				1524156	Y07685	NfiB		ILMN_1239265	001690010	S	2280	CGACCTGTGACCCTGACCATGACAGATACTAAACCCATCACTACATCCAC										
Mus musculus	RefSeq	ILMN_197460	ILMN_197460	LOC380897	XM_354811.1	XM_354811.1			38076067	XM_354811.1	LOC380897		ILMN_1240606	002970487	S	14	ACCTGAGGCTCAATCGGCTTAGGAAAGCCTGTGAACTGCTTTCTCTGTCC										
Mus musculus	RefSeq	ILMN_194163	ILMN_261550	HYAL2	NM_010489.2	NM_010489.2		15587	45331201	NM_010489.2	Hyal2	NP_034619.2	ILMN_1230039	002810435	S	1755	GCTAGGCCAGAGAAGGCCTGACTCTACTCCCTGCTCCTGGATAGTTTATA	9	+	107475015-107475064	9qF1	Mus musculus hyaluronoglucosaminidase 2 (Hyal2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AI256841; AU020858; AW555733	AI256841; AU020858; AW555733
Mus musculus	RefSeq	ILMN_212578	ILMN_212578	TBX6	NM_011538.2	NM_011538.2		21389	48928034	NM_011538.2	Tbx6	NP_035668.2	ILMN_1249014	006130121	S	1631	CCTGGGGGCCTTGTTACTAGTGCAAGCCATGCCAATTTGTTCTCAGGATC	7	+	133928978-133929027	7qF3	Mus musculus T-box 6 (Tbx6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	rv	rv
Mus musculus	RefSeq	ILMN_212578	ILMN_212578	TBX6	NM_011538.2	NM_011538.2		21389	48928034	NM_011538.2	Tbx6	NP_035668.2	ILMN_2660916	001230458	S	1277	CTCTACCGTACCCAGGACCTGGAGGTTATCTGGACATGGGATCCAAGCCA	7	+	133928624-133928673	7qF3	Mus musculus T-box 6 (Tbx6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	rv	rv
Mus musculus	RefSeq	ILMN_187331	ILMN_237509	SMARCA2	NM_026003.2	NM_026003.2		67155	51593082	NM_026003.2	Smarca2	NP_080279.1	ILMN_1252932	005490364	S	173	GCCGGCTTGTTAATTTTATCCCCACTAACTGTGATTTCCGATAGCCGGCC	19	+	26824372-26824421	19qC1	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (Smarca2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence TAS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence TAS]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SNF2alpha; brahma; Snf2l2; brm; 2610209L14Rik	SNF2alpha; brahma; Snf2l2; brm; 2610209L14Rik
Mus musculus	RefSeq	ILMN_221884	ILMN_221884	1700029G01RIK	NM_025856.2	NM_025856.2		66938	118130252	NM_025856.2	1700029G01Rik	NP_080132.1	ILMN_1250435	001110021	S	1772	GGGACATCTATCCTGCTTGGGCCACCCCGGTCCTTGCACACAACTTTGAC	4	-	125827883-125827932	4qD2.2	Mus musculus RIKEN cDNA 1700029G01 gene (1700029G01Rik), mRNA.				AU019788	AU019788
Mus musculus	RefSeq	ILMN_215519	ILMN_215519	DPY19L3	NM_178704.2	NM_178704.2		233115	31341222	NM_178704.2	Dpy19l3	NP_848819.1	ILMN_2660541	001110100	S	3832	GGAAACATGTTCACCAGTGCTAAAGGCTTAATGAGGCTGTAGTGCCTGCT	7	-	36474252-36474301	7qB2	Mus musculus dpy-19-like 3 (C. elegans) (Dpy19l3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			6030410G08; 9330164H19Rik	6030410G08; 9330164H19Rik
Mus musculus	RefSeq	ILMN_195224	ILMN_234653	DACH1	NM_001038610.1	NM_001038610.1		13134	84370381	NM_001038610.1	Dach1	NP_001033699.1	ILMN_2513639	005910315	S	4843	TAAAGTTTTCTAAAAATGATAAAAGGTTATTACGAATTTTGTTGTACAAA	14	-	98186242-98186291	14qE2.1	Mus musculus dachshund 1 (Drosophila) (Dach1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Dac; Dach; E130112M23Rik; AI182278	Dac; Dach; E130112M23Rik; AI182278
Mus musculus	RefSeq	ILMN_218984	ILMN_313813	LOC100046775	XM_001476786.1	XM_001476786.1		100046775	149252230	XM_001476786.1	LOC100046775	XP_001476836.1	ILMN_1225654	003140519	S	1564	GAAGACTGAGAACTCTAGTGATGCATTTGTGCCATTTACTGTCTGGTTCC					PREDICTED: Mus musculus similar to CMP-sialic acid transporter (LOC100046775), mRNA.					
Mus musculus	RefSeq	ILMN_217277	ILMN_217277	TCTEX1D4	NM_175030.2	NM_175030.2		242646	141803150	NM_175030.2	Tctex1d4	NP_778195.1	ILMN_1214031	000990669	S	546	TCATACCGCTTAGAACCGGCGCCTGGGGAACACTGGGAAGCTGCAGGTGC	4	+	116800666-116800715	4qD1	Mus musculus Tctex1 domain containing 4 (Tctex1d4), mRNA.					
Mus musculus	RefSeq	ILMN_185139	ILMN_247362	CALB1	NM_009788.4	NM_009788.4		12307	145864481	NM_009788.4	Calb1	NP_033918.1	ILMN_1224884	004780470	S	2529	CAATTAGGGTAGAAAAGTAGATATCGTGAATCATTATAGCCGAAGGACTC				4qA2	Mus musculus calbindin 1 (Calb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 5499] [evidence IEA]	CB; Calb-1; Brain-2; Calb	CB; Calb-1; Brain-2; Calb
Mus musculus	RefSeq	ILMN_215872	ILMN_215872	STMN3	NM_009133.3	NM_009133.3		20262	142349134	NM_009133.3	Stmn3	NP_033159.1	ILMN_1225704	003130768	S	696	CAACTACAAGATGGAGCTGAGCAAGGAGATCCGCGAGGCGCACTTGGCAG	2	-	181041946-181041995	2qH4	Mus musculus stathmin-like 3 (Stmn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of Rac protein signal transduction [goid 35021] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 51493] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IDA]; Any process that modulates the activity of a GTPase of the Rac family [goid 32314] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]	9330161A03Rik; Sclip; AI604839; R75323	9330161A03Rik; Sclip; AI604839; R75323
Mus musculus	RefSeq	ILMN_216796	ILMN_216796	PTPN2	NM_008977.2	NM_008977.2		19255	118130582	NM_008977.2	Ptpn2	NP_033003.1	ILMN_1212685	002140673	S	1438	GTGTATGAAATGTAGAAAGATGTAAAGGAAATAAATTAGGAGCGACTACT	18	-	67825235-67825284	18qE1	Mus musculus protein tyrosine phosphatase, non-receptor type 2 (Ptpn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	TC-PTP; Ptpt; AI325124	TC-PTP; Ptpt; AI325124
Mus musculus	RefSeq	ILMN_215887	ILMN_215887	9030625A04RIK	NM_172488.1	NM_172488.1		210808	27369671	NM_172488.1	9030625A04Rik	NP_766076.1	ILMN_2949217	001570703	S	2002	GCTGGGAGATACCTGTTCCCTTAGGTTTCCTTATGGCATTCTCAAGCGCC	14	-	75758723-75758772	14qD3	Mus musculus RIKEN cDNA 9030625A04 gene (9030625A04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219920	ILMN_219920	ANXA9	NM_023628.2	NM_023628.2		71790	145864474	NM_023628.2	Anxa9	NP_076117.2	ILMN_2715226	001820687	S	1515	GCTCAGCCATTCAACAGGAATCCTGTTTTTACCCCAGTACTGCACTTAAC				3qF2.1	Mus musculus annexin A9 (Anxa9), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	2310069F17Rik; 1110003P15Rik	2310069F17Rik; 1110003P15Rik
Mus musculus	RefSeq	ILMN_196565	ILMN_196565	CDC27	NM_145436.2	NM_145436.2		217232	124378021	NM_145436.2	Cdc27	NP_663411.2	ILMN_1222385	002480598	S	1708	CCTTCTCATCACTACAGTACTGGTTGGGTCCTATGCCAGATTGGACGGGC	11	-	104382005-104382054	11qE1	Mus musculus cell division cycle 27 homolog (S. cerevisiae) (Cdc27), mRNA. XM_001000657 XM_001000666 XM_001000677 XM_001000684 XM_001000693 XM_001000711 XM_001004163 XM_895207 XM_903089 XM_903091-XM_903097 XM_911095 XM_921895 XM_921914 XM_921924 XM_921931 XM_921943 XM_921947 XM_921951 XM_984141	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence ISO]	The cell cycle process whereby a cell progresses from metaphase to anaphase during mitosis, triggered by the destruction of mitotic cyclins [goid 7091] [evidence ISO]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	APC3; BC023187; AI452358	APC3; BC023187; AI452358
Mus musculus	RefSeq	ILMN_195462	ILMN_196565	CDC27	NM_145436.2	NM_145436.2		217232	124378021	NM_145436.2	Cdc27	NP_663411.2	ILMN_2515768	001190630	S	5451	TCCTGACTTATTTCAGAAATTGTATAGTCTTTGGGGGGAAAGTCTTCTCT	11	-	104364120-104364169	11qE1	Mus musculus cell division cycle 27 homolog (S. cerevisiae) (Cdc27), mRNA. XM_001000657 XM_001000666 XM_001000677 XM_001000684 XM_001000693 XM_001000711 XM_001004163 XM_895207 XM_903089 XM_903091-XM_903097 XM_911095 XM_921895 XM_921914 XM_921924 XM_921931 XM_921943 XM_921947 XM_921951 XM_984141	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence ISO]	The cell cycle process whereby a cell progresses from metaphase to anaphase during mitosis, triggered by the destruction of mitotic cyclins [goid 7091] [evidence ISO]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	APC3; BC023187; AI452358	APC3; BC023187; AI452358
Mus musculus	RefSeq	ILMN_196565	ILMN_196565	CDC27	NM_145436.2	NM_145436.2		217232	124378021	NM_145436.2	Cdc27	NP_663411.2	ILMN_2991534	007550653	S	2609	CCCAGGAGGAACAGATCATGGGGACAGATGAATCCCAGGAGAGCAGCATG	11	-	104366962-104366994:104368452-104368468	11qE1	Mus musculus cell division cycle 27 homolog (S. cerevisiae) (Cdc27), mRNA. XM_001000657 XM_001000666 XM_001000677 XM_001000684 XM_001000693 XM_001000711 XM_001004163 XM_895207 XM_903089 XM_903091-XM_903097 XM_911095 XM_921895 XM_921914 XM_921924 XM_921931 XM_921943 XM_921947 XM_921951 XM_984141	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence ISO]	The cell cycle process whereby a cell progresses from metaphase to anaphase during mitosis, triggered by the destruction of mitotic cyclins [goid 7091] [evidence ISO]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	APC3; BC023187; AI452358	APC3; BC023187; AI452358
Mus musculus	MEEBO	ILMN_214195	ILMN_214195	SOS2	scl42385.21_636	XM_127051.3			38050411	XM_127051.3	Sos2		ILMN_1235158	003840451	S	5474	GCCATTGTAAAGTAGCCAAAAGCCACGTTGTTTATCTACTGGTCTGTGGC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_240151	ILMN_240151	LOC434960	NM_001025241.1	NM_001025241.1		434960	68989246	NM_001025241.1	LOC434960	NP_001020412.1	ILMN_2866712	006450739	S	346	CCAGGCCCTGGGGAATATTGTTGGCTGCAGAATTTCTCATGGGTGGAAGG	Y	-	45317-45366		Mus musculus similar to spermiogenesis specific transcript on the Y 2 (LOC434960), mRNA.				MGC107173	MGC107173
Mus musculus	Riken	ILMN_204378	ILMN_204378	9830113C24RIK	ri|9830113C24|PX00117F02|AK036465|2209					AK036465	9830113C24Rik		ILMN_1248237	004180553	S	1336	CTGATGGGAGGAGCCTCAGTTCCACTCCTACTGATGTCTTTACTGGCTGC										
Mus musculus	RefSeq	ILMN_207295	ILMN_212667	COL12A1	NM_007730.2	NM_007730.2		12816	111074528	NM_007730.2	Col12a1	NP_031756.2	ILMN_1224404	005270673	S	9588	CTCGCGGCAGATATGGTTAACGAACTGGGTCGGCATCATACAGGAGGGTG	9	-	79448819-79448868	9qE1	Mus musculus collagen, type XII, alpha 1 (Col12a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AW743884	AW743884
Mus musculus	RefSeq	ILMN_212667	ILMN_212667	COL12A1	NM_007730.2	NM_007730.2		12816	111074528	NM_007730.2	Col12a1	NP_031756.2	ILMN_2862538	003870360	S	11212	AAAACCAAAAAGGAGGGGAACACCAGCTCACTGCAGCAGTTCTCCCTTCT	9	-	79447195-79447244	9qE1	Mus musculus collagen, type XII, alpha 1 (Col12a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AW743884	AW743884
Mus musculus	RefSeq	ILMN_217061	ILMN_328357	DLX6	NM_010057.1	NM_010057.1		13396	147900421	NM_010057.1	Dlx6	NP_034187.1	ILMN_1213404	002000681	S	845	GGCGTCAGTATGCCTCCCAACAGCTACATGCCGGGGTATTCACACTGGTA					Mus musculus distal-less homeobox 6 (Dlx6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223384	ILMN_223384	2410017P07RIK	NM_026643.2	NM_026643.2		103268	27754047	NM_026643.2	2410017P07Rik	NP_080919.2	ILMN_2807750	006220133	S	1598	GGCCTTGACCTCATGAAGCTCTTTAGAAGCATCTGTTTTGCAGCTCCCAT	10	-	41407847-41407896	10qB2	Mus musculus RIKEN cDNA 2410017P07 gene (2410017P07Rik), mRNA.				AI607327; 4930484D11Rik	AI607327; 4930484D11Rik
Mus musculus	Riken	ILMN_205023	ILMN_205023	SP100	ri|A430075G10|PX00138C12|AK040186|3808					AK040186	Sp100		ILMN_1258416	004040148	S	3646	CTGAAGGGTCTTCGGGGTCCCTCTGGCGCCTACAGAATCATCTACAGCAG						A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212139	ILMN_212139	EHBP1	NM_153078.1	NM_153078.1		216565	23346488	NM_153078.1	Ehbp1	NP_694718.1	ILMN_2868981	003170066	S	4520	GTTCAATGTGCAGCAGTTTACAAAGACAGCTCATCAGCTGATGATGCACC	11	-	21906082-21906131	11qA3.2	Mus musculus EH domain binding protein 1 (Ehbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Flj21950; NACSIN; AF424697; RP23-51G7.3	Flj21950; NACSIN; AF424697; RP23-51G7.3
Mus musculus	RefSeq	ILMN_200191	ILMN_200191	LOC385904	XM_358992.1	XM_358992.1			38080864	XM_358992.1	LOC385904		ILMN_1213147	002070364	S	348	GGCATCCATTCGGTCTGAAGACACCAAACCTGGACACTGTTGCTGCTACC										
Mus musculus	RefSeq	ILMN_244948	ILMN_244948	OLFR918	NM_146375.1	NM_146375.1		258372	22129550	NM_146375.1	Olfr918	NP_666487.1	ILMN_2937928	004290184	S	425	CACTGCTGTATAAGGTCACCATGTCCCCACAGGTCTGCTCAATGCTATCA	9	-	38480592-38480641	9qA5.1	Mus musculus olfactory receptor 918 (Olfr918), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR164-3	MOR164-3
Mus musculus	RefSeq	ILMN_192848	ILMN_248104	RND1	NM_172612.3	NM_172612.3		223881	146198530	NM_172612.3	Rnd1	NP_766200.1	ILMN_1243466	000990241	S	1957	CTCTGAATCCCACCTGCATCCTGCTAAGCCAAGAAAGAGGTCCTTGGCCC				15qF1	Mus musculus Rho family GTPase 1 (Rnd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Arhs; A830014L09Rik	Arhs; A830014L09Rik
Mus musculus	RefSeq	ILMN_222229	ILMN_238068	ISX	NM_027837.2	NM_027837.2		71597	142386977	NM_027837.2	Isx	NP_082113.1	ILMN_1240449	004230343	S	1559	CGTGTACTTGTTCATGATGTCCATACTGAACACTGAGCATTGTGCACTTG	8	+	77417172-77417221	8qC1	Mus musculus intestine specific homeobox (Isx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9130012O13Rik	9130012O13Rik
Mus musculus	MEEBO	ILMN_192898	ILMN_192898	TBX4	scl41099.10_175				27777678	NM_011536	Tbx4		ILMN_1253515	005560671	S	8	CGTCAGGGCGGCCGGTATGAACTCTGGAGATCACTAAACTCTTTGCATGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence ISS]; The process by which the anatomical structures of leg are generated and organized. Morphogenesis pertains to the creation of form. A leg is a limb on which an animal walks and stands [goid 35110] [evidence ISS]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_203569	ILMN_203569	9530013D10RIK	ri|9530013D10|PX00111K20|AK035303|2874					AK035303	9530013D10Rik		ILMN_1245463	000630408	S	2328	CTGCGTTCCAAACGCCTCTATTTAAGGCTGGGGGACAGAAGCCTTTAGCT										
Mus musculus	RefSeq	ILMN_210778	ILMN_210778	MRPL40	NM_010922.1	NM_010922.1		18100	6754861	NM_010922.1	Mrpl40	NP_035052.1	ILMN_2609087	002680164	S	579	AGAGCTCTATGCCGAGGCCATAAAGCGGGATACCAGCCTATTCCCCTTCG	16	-	18872537-18872586	16qA3	Mus musculus mitochondrial ribosomal protein L40 (Mrpl40), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nlvcf	Nlvcf
Mus musculus	RefSeq	ILMN_200390	ILMN_200390	LOC386398	XM_359203.1	XM_359203.1			38081528	XM_359203.1	LOC386398		ILMN_1230911	006270598	S	456	CCAGCGGCTCCTAAGTGTGTCCGTTACTAAACCCACCAAGTCGTACCCTA										
Mus musculus	RefSeq	ILMN_218619	ILMN_218619	ARX	NM_007492.3	NM_007492.3		11878	31982501	NM_007492.3	Arx	NP_031518.2	ILMN_1252013	004920619	S	2344	CCAAAGGGAAATACTCTGCTAGAATATGGACTGTTGAAGTCACCAAACTG	X	+	90543309-90543358	XqC3	Mus musculus aristaless related homeobox (Arx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration [goid 21800] [evidence IMP]; The progression of the globus pallidus over time from its initial formation until its mature state. The globus pallidus is one of the basal ganglia involved with control of voluntary movement in the brain [goid 21759] [evidence IMP]; The migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex [goid 21853] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The creation of greater cell numbers in the forebrain due to cell division of progenitor cells [goid 21846] [evidence IMP]; The directed movement of individual interneuron precursors during the embryonic development of the olfactory bulb [goid 21831] [evidence IMP]; The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex [goid 21772] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209289	ILMN_328663	LOC100047187	XM_001476633.1	XM_001476633.1		100047187	149272381	XM_001476633.1	LOC100047187	XP_001476683.1	ILMN_2700779	006400619	S	2883	GCAAAGGGAAACTGCTGCTGGCATTGATTCACTGATGACACTGTTCATTG					PREDICTED: Mus musculus similar to zinc finger, X-linked, duplicated B (LOC100047187), mRNA.					
Mus musculus	RefSeq	ILMN_201250	ILMN_201250	LOC382114	XM_358707.1	XM_358707.1			38090157	XM_358707.1	LOC382114		ILMN_2541629	004810553	S	918	GTGCAAATCTACTGTTCACCCACAGCACGGAGCTCTTGCAGTATAGCTGG										
Mus musculus	RefSeq	ILMN_214044	ILMN_214044	A530064D06RIK	NM_178796.5	NM_178796.5		328830	149363669	NM_178796.5	A530064D06Rik	NP_848911.2	ILMN_1229939	003610300	S	545	GTTGCAAATAACACGTCAGTTTATCTCAGAAATATCCACCTGGTGGTGTC				17qC	Mus musculus RIKEN cDNA A530064D06 gene (A530064D06Rik), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214044	ILMN_214044	A530064D06RIK	NM_178796.5	NM_178796.5		328830	149363669	NM_178796.5	A530064D06Rik	NP_848911.2	ILMN_1214183	000010253	S	1783	CTGATTTATTGTTTGCATGTAGATAAATTGGTATAAGAGCAGCCTGCGGG				17qC	Mus musculus RIKEN cDNA A530064D06 gene (A530064D06Rik), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_203426	ILMN_203426	GABT1	ri|C030005M05|PX00073J12|AK047663|2276					AK047663	Gabt1		ILMN_1256498	000610541	S	2152	TGGCACCAAGACACCCCCAGAAGCCCACCTGGAGAAGGAGACAAGTGCCT										
Mus musculus	RefSeq	ILMN_222047	ILMN_239335	LOC667754	XR_002069.1	XR_002069.1		667754	94383778	XR_002069.1	LOC667754		ILMN_2743848	006110202	S	1876	AAAATACTCTGTATTACTTATCATTCTGGCCAAACTTTCATTAAATTCAA	8	+	107397895-107397944	8qD3	PREDICTED: Mus musculus similar to Carboxylesterase 2 (LOC667754), misc RNA.					
Mus musculus	MEEBO	ILMN_189204	ILMN_189204	MTDNA_ND6	mtDNA_ND6						mtDNA_ND6		ILMN_1219839	002120576	S	1	GGTTGGTTGTCTTGGGTTAGCATTAAAGCCTTCACCTATTTATGGAGGTT										
Mus musculus	Riken	ILMN_206937	ILMN_206937	NNT	ri|D630001M09|PX00195I12|AK085260|3054					AK085260	Nnt		ILMN_2583813	003610133	S	2914	CATGCGTTGCTGGTTTCACACACGCCAGGTTAAGTCCCCCACTACTGAAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+ [goid 8746] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD+ and B-specific (i.e. the pro-S hydrogen is transferred) with respect to NADP+ [goid 8750] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_254276	ILMN_254276	A830006F12RIK	NM_177164.3	NM_177164.3		320460	70887781	NM_177164.3	A830006F12Rik	NP_796138.2	ILMN_2778438	001570064	S	4353	GCAGCCACAGTTACCTCTGTTACCATTTCTCCTCTGCCTTTGGCTCTCGG	1	+	70931669-70931718	1qC3	Mus musculus RIKEN cDNA A830006F12 gene (A830006F12Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_189887	ILMN_254276	A830006F12RIK	NM_177164.3	NM_177164.3		320460	70887781	NM_177164.3	A830006F12Rik	NP_796138.2	ILMN_2465282	002260609	S	1570	GCCAGCTACAACAGGGTCACCAGCAAAACCTTCTGGGGTTGACAAAAGTG	1	+	70928886-70928935	1qC3	Mus musculus RIKEN cDNA A830006F12 gene (A830006F12Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	MEEBO	ILMN_186463	ILMN_186463	GAPDS	scl31511.11.1_22				6679938	NM_008085	Gapds		ILMN_1244385	002900189	S	18	CCTCCTCCGCTACATGTTTAGCCGAGAGAAGTAACACAAAAGGCCCCTCC										
Mus musculus	RefSeq	ILMN_199837	ILMN_199837	LOC383070	XM_356838.1	XM_356838.1			38077858	XM_356838.1	LOC383070		ILMN_1240320	004880347	S	54	GAACCCTGGCAAGATGAACAAAGAAAACATTGGAAGGGCATGGTGGCTGC										
Mus musculus	RefSeq	ILMN_220725	ILMN_259453	SERPINA1F	NM_026687.1	NM_026687.1		68348	77404228	NM_026687.1	Serpina1f	NP_080963.1	ILMN_2725876	006900612	S	1331	GTACAAACTCATGCTTTAAAAAGCTCGGATCGACTGATATGGGCCGGATG	12	-	104928031-104928080	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 1f (Serpina1f), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	0610012A11Rik; epserin; AI327419	0610012A11Rik; epserin; AI327419
Mus musculus	Riken	ILMN_203570	ILMN_203570	9530010N18RIK	ri|9530010N18|PX00111L14|AK035292|2511					AK035292	9530010N18Rik		ILMN_1247088	002810601	S	2159	CGATGAGGTGGTTGTGTGGTCCATGCATGCTTCCTGGGGGTGTAATTGGC										
Mus musculus	RefSeq	ILMN_198132	ILMN_226423	BAIAP3	XM_619443.3	XM_619443.3		545192	94402521	XM_619443.3	Baiap3	XP_619443.2	ILMN_1227729	000150348	S	1070	ATCCCTATCCGGGAGGTGCCTGTGGCAGGTGCTGACCGCTGGTTTAAGCT					PREDICTED: Mus musculus BAI1-associated protein 3 (Baiap3), mRNA.					
Mus musculus	RefSeq	ILMN_198131	ILMN_226423	BAIAP3	XM_619443.3	XM_619443.3		545192	94402521	XM_619443.3	Baiap3	XP_619443.2	ILMN_1214015	002750630	S	3494	CGGATGCTAGAAGGCCGCACCAGCAGAGAAGCACAGGAGTTTGTCAAGAA					PREDICTED: Mus musculus BAI1-associated protein 3 (Baiap3), mRNA.					
Mus musculus	Riken	ILMN_206439	ILMN_206439	TLL	ri|C230061N18|PX00175L04|AK082541|2520					AK082541	Tll		ILMN_1228130	002710685	S	2344	GACCAAGGTGAGGTGTCCCTACTGTGAGTTCAAGCATATGCAAACCCTGG										
Mus musculus	RefSeq	ILMN_215821	ILMN_215821	DNMT3L	NM_019448.2	NM_019448.2		54427	31980899	NM_019448.2	Dnmt3l	NP_062321.1	ILMN_3112268	000460746	A	1498	CAGGCCTTCGGGTTTCTCTCCTGTTTGATTGCCAGGATGCCTCTGTGCAG	10	+	77466573-77466622	10qC1	Mus musculus DNA (cytosine-5-)-methyltransferase 3-like (Dnmt3l), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [evidence IDA]; Increases the activity of an enzyme [goid 8047] [evidence ISO]; Interacting selectively with any enzyme [goid 19899] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D6Ertd14e; ecat7; MGC102308	D6Ertd14e; ecat7; MGC102308
Mus musculus	MEEBO	ILMN_192139	ILMN_192139	4930405J17RIK	scl38147.3.1_123						4930405J17Rik		ILMN_2485365	004010424	S	2	CCTGCAGGACTCCGACCTCGAAAAGCAGCAAAGGGTTTCCCTCTTTTACA										
Mus musculus	Riken	ILMN_206749	ILMN_206749	D630024O03RIK	ri|D630024O03|PX00197J13|AK085434|1298					AK085434	D630024O03Rik		ILMN_2582415	007100671	S	720	TATTTCAGAGGACTCCTGGGATCCAGAAGATCTGGGCTATGTCAGGGCCC										
Mus musculus	RefSeq	ILMN_193790	ILMN_242188	ADAMTS12	NM_175501.2	NM_175501.2		239337	153945811	NM_175501.2	Adamts12	NP_780710.2	ILMN_2671344	007570176	S	4795	CCTCTGTGACCATCAAGTCAAACCCCCAGAATTCCAAACATGCAACCAGC				15qA1	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 (Adamts12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	AI605170; ADAMTS-12	AI605170; ADAMTS-12
Mus musculus	RefSeq	ILMN_199665	ILMN_199665	LOC383800	XM_357261.1	XM_357261.1			38075760	XM_357261.1	LOC383800		ILMN_1242684	002030717	S	390	GGTCCGGGGTCGCCTTGTTGCCTGCGCTCTTGACCGAGAAATTGACATTG										
Mus musculus	RefSeq	ILMN_199037	ILMN_240809	GM867	NM_001037714.2	NM_001037714.2		333670	144226203	NM_001037714.2	Gm867	NP_001032803.1	ILMN_1246014	006380528	S	319	CAAGTGACCTATGTCCTGGTACAGAAGGGAAAGATGGGACCCCTACTCAC	10	-	75402199-75402225:75402465-75402487	10qC1	Mus musculus gene model 867, (NCBI) (Gm867), mRNA.				Gm736	Gm736
Mus musculus	MEEBO	ILMN_185973	ILMN_185973	SORCS3	scl52928.27_344				23956143	NM_025696	Sorcs3		ILMN_1233371	007200110	S	3773	GCATTGCCACCATTGCAAGCAGCGAGAGCACAAAGGAGATCCCCAACTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_194513	ILMN_194513	COG5	scl43305.23.1_10						Cog5		ILMN_2507101	005220168	S	20	AATTTTCTTAAAAATAGAAATACAGAATCAAATGCATATAATGAACAATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances from one Golgi cisterna to another, mediated by small transport vesicles [goid 48219] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_222377	ILMN_310475	4930544G11RIK	NR_003637.1	NR_003637.1		67653	153792075	NR_003637.1	4930544G11Rik		ILMN_1233275	004760369	S	1124	GTTTACTCCCTAACAACTTTCACTGCCATCTTTATTCTCTTGGAAATCTC				6qC1	Mus musculus RIKEN cDNA 4930544G11 gene (4930544G11Rik), non-coding RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC130069; MGC130070	MGC130069; MGC130070
Mus musculus	RefSeq	ILMN_214788	ILMN_214788	RAB5A	NM_025887.2	NM_025887.2		271457	31981152	NM_025887.2	Rab5a	NP_080163.1	ILMN_2786763	006550446	S	1318	TCCATGTGAAAGTGCAGGGGAACAGCTCATCTCCAGTGGGTATGGACCCA	17	+	52971561-52971610	17qC	Mus musculus RAB5A, member RAS oncogene family (Rab5a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AI663973; AU021172; 2410015H04Rik	AI663973; AU021172; 2410015H04Rik
Mus musculus	RefSeq	ILMN_214788	ILMN_214788	RAB5A	NM_025887.2	NM_025887.2		271457	31981152	NM_025887.2	Rab5a	NP_080163.1	ILMN_2786764	000620541	S	1140	GGCAAAAACCATGGAGTTGGGAGCATTTAGCCGGCCCAGTGTGACTTCCA	17	+	52971383-52971432	17qC	Mus musculus RAB5A, member RAS oncogene family (Rab5a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AI663973; AU021172; 2410015H04Rik	AI663973; AU021172; 2410015H04Rik
Mus musculus	RefSeq	ILMN_200746	ILMN_200746	LOC383473	XM_357085.1	XM_357085.1			38085755	XM_357085.1	LOC383473		ILMN_2539855	005270184	S	416	ACCAGGCACCGGTTCTTACTCTCCCGGAAAGGGGGTCTCGAGAGTCTGAA										
Mus musculus	Riken	ILMN_206513	ILMN_206513	D630041K24RIK	ri|D630041K24|PX00198O12|AK085566|2650					AK085566	D630041K24Rik		ILMN_2580658	004040519	S	2409	TCTCCAAAACCCATGGCGTGCTGTGTACAATGATCTCTTAGGTCTCAGTG										
Mus musculus	RefSeq	ILMN_215836	ILMN_215836	AMIGO1	NM_146137.2	NM_146137.2		229715	51988880	NM_146137.2	Amigo1	NP_666249.2	ILMN_1214975	002320270	S	4972	CCCATGGGCTCTATAACTAGACAATGACCATTAAACCTGGCTTGAGTCTC	3	+	107994636-107994685	3qF2.3	Mus musculus adhesion molecule with Ig like domain 1 (Amigo1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISO]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence ISO]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence ISS]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence ISS]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence ISS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-89M15.6; ali2; A; Amigo; MGC25558	RP23-89M15.6; ali2; A; Amigo; MGC25558
Mus musculus	RefSeq	ILMN_222195	ILMN_222195	D630002G06RIK	NM_172776.2	NM_172776.2		236293	142344222	NM_172776.2	D630002G06Rik	NP_766364.1	ILMN_1225143	004490551	S	1939	ATTAATAACTCAAGATAAAATAGAAAACTGATCACATAGGAATTGCTGCA	19	-	8234877-8234926	19qA	Mus musculus RIKEN cDNA D630002G06 gene (D630002G06Rik), mRNA.				MGC143567	MGC143567
Mus musculus	MEEBO	ILMN_189764	ILMN_189764	PCLO	scl28100.26.1_27				15277339	NM_011995	Pclo		ILMN_2665813	003390154	S	14699	AAACCAGTGTCGCCCAGACCCACCTGGAAGATGCAGGGGCGGCCATAGCC						The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]; A series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response [goid 19933] [evidence IDA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]; The process by which synaptic vesicles are directed to specific destination membranes, mediated by molecules at the vesicle membrane and target membrane surfaces [goid 16080] [evidence NAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin [goid 5522] [evidence IDA]		
Mus musculus	Riken	ILMN_202892	ILMN_202892	8430438E03RIK	ri|8430438E03|PX00025A16|AK033406|2247					AK033406	8430438E03Rik		ILMN_2553116	002060408	S	1862	GGGCTCGATCTCCAGGATAGAGGAAAAACTGGGGTCTGAAGCGAGAGTTT										
Mus musculus	Riken	ILMN_202663	ILMN_202663	A430110D14RIK	ri|A430110D14|PX00065C11|AK020790|1207					AK020790	A430110D14Rik		ILMN_1252390	000050630	S	730	GCAACCAAGCTGGTCCTTCTCAGGAGCCTCCTCTCAGCTTAGACTCAAAG										
Mus musculus	RefSeq	ILMN_219206	ILMN_219206	NLGN1	NM_138666.2	NM_138666.2		192167	34447216	NM_138666.2	Nlgn1	NP_619607.2	ILMN_1222411	004290612	S	5421	CTGTAACAGAAACCTTTCTTTCCAGCTACCCTTTTTCAAGAATCGAAAGC	3	-	25330922-25330971	3qA3	Mus musculus neuroligin 1 (Nlgn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IMP]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IGI]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which synaptic vesicles are directed to specific destination membranes, mediated by molecules at the vesicle membrane and target membrane surfaces [goid 16080] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IDA]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IDA]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IMP]	mKIAA1070; MGC107366; BB179718; 6330415N05Rik	mKIAA1070; MGC107366; BB179718; 6330415N05Rik
Mus musculus	RefSeq	ILMN_218500	ILMN_224578	OLFR582	NM_147053.1	NM_147053.1		259055	22128844	NM_147053.1	Olfr582	NP_667264.1	ILMN_2696600	001190093	S	905	GAACCAAGCAGATCAGAGACAGAGTTACCCAAGCATTTTGTGGAAAAGGC	7	+	110190899-110190948	7qE3	Mus musculus olfactory receptor 582 (Olfr582), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC130306; MOR30-3; MGC130307	MGC130306; MOR30-3; MGC130307
Mus musculus	MEEBO	ILMN_191645	ILMN_191645	9626962_211_RC	9626962_211_rc						9626962_211_rc		ILMN_1225181	000110215	S	2	TCACTCAGAGGAGACCCTCCCAAGGAACAGCGAGACCACGATTCGGATGC										
Mus musculus	Riken	ILMN_202616	ILMN_202616	9430024O13RIK	ri|9430024O13|PX00108H20|AK020437|1271					AK020437	9430024O13Rik		ILMN_1214108	000510187	S	1175	ACAGTAGTTCCAAGGGATTCTGGCTTCCAAGGGCGCTGCATGTGTGTGGC										
Mus musculus	RefSeq	ILMN_204860	ILMN_324209	LOC100045795	XM_001474947.1	XM_001474947.1		100045795	149251695	XM_001474947.1	LOC100045795	XP_001474997.1	ILMN_1250256	000670088	S	6431	TATGCCATGCATCGTCACAAGCCTACGGCTGCTCTAAATGCAGGTAACCA					PREDICTED: Mus musculus similar to mKIAA3002 protein (LOC100045795), mRNA.					
Mus musculus	RefSeq	ILMN_189625	ILMN_247823	KISS1	NM_178260.2	NM_178260.2		280287	31342202	NM_178260.2	Kiss1	NP_839991.1	ILMN_2735829	004290017	S	349	AGAAGGACCTGTCGACCTACAACTGGAACTCCTTCGGCCTGCGCTACGGC	1	+	135157121-135157170	1qE4	Mus musculus KiSS-1 metastasis-suppressor (Kiss1), mRNA.		The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a G-protein-coupled receptor [goid 1664] [evidence TAS]	metastatin	metastatin
Mus musculus	RefSeq	ILMN_189856	ILMN_189856	UNC119	NM_011676.2	NM_011676.2		22248	31981438	NM_011676.2	Unc119	NP_035806.1	ILMN_2847834	000270332	S	946	GGCTGTCCCCATGTTCAGGAAGGCCTCCTGCAAGAGGAGGACTCCTGGAT	11	+	78162323-78162372	11qB5	Mus musculus unc-119 homolog (C. elegans) (Unc119), mRNA. XM_001004318		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]		MRG4; HRG4; Unc119h	MRG4; HRG4; Unc119h
Mus musculus	RefSeq	ILMN_189856	ILMN_189856	UNC119	NM_011676.2	NM_011676.2		22248	31981438	NM_011676.2	Unc119	NP_035806.1	ILMN_2464999	000060278	S	723	GGTGATGCATAACAAAGCAGACTATTCCTACAGTGGGACACCCTGACCCC	11	+	78162100-78162145:78162146-78162149	11qB5	Mus musculus unc-119 homolog (C. elegans) (Unc119), mRNA. XM_001004318		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]		MRG4; HRG4; Unc119h	MRG4; HRG4; Unc119h
Mus musculus	MEEBO	ILMN_189668	ILMN_189668	3110043J09RIK	scl47668.10_45				21312154	NM_028455	3110043J09Rik		ILMN_1215997	001430273	S	8	GCTTCTATGGTTCTACTGCCAATGTCCCTAGTGGTTCTTTCACTCAGAGC										
Mus musculus	MEEBO	ILMN_189668	ILMN_189668	3110043J09RIK	scl47668.10_45				21312154	NM_028455	3110043J09Rik		ILMN_2732934	005080180	S	172	CAGGGGAGACGCATCTTCACTTTCAGCTGCTGCCGGCTGCCACCCTTGCA										
Mus musculus	RefSeq	ILMN_216076	ILMN_216076	DEFB38	NM_183036.1	NM_183036.1		360212	33942121	NM_183036.1	Defb38	NP_898857.1	ILMN_1260230	006760440	S	103	GCCTGTCACTACTTTGAATGCCCATGGTTGTATTATTCTGTTGGCACCTG	8	-	19023503-19023552	8qA1.3	Mus musculus defensin beta 38 (Defb38), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	MEEBO	ILMN_187216	ILMN_187216	C030032C09RIK	scl0077531.1_129						C030032C09Rik		ILMN_2442177	004280630	S	17	CCCCGGGACCAAAGGCCCAGCCCTCTCCACAGATAAAGAGACTTGTTTTC										
Mus musculus	RefSeq	ILMN_219384	ILMN_219384	OLFR871	NM_146903.1	NM_146903.1		258905	22129076	NM_146903.1	Olfr871	NP_667114.1	ILMN_2708077	001450113	S	610	TGTGTCCTTGGCTTCATCCCTTTCTCAGGGATCCTTTATTCATACTGTAA	9	+	20017404-20017453	9qA3	Mus musculus olfactory receptor 871 (Olfr871), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR141-2	MOR141-2
Mus musculus	MEEBO	ILMN_223155	ILMN_223155	CXCL13	scl27566.4_105	NM_018866.1			9256520	NM_018866.1	Cxcl13		ILMN_2760019	003060040	S	760	TGCGAGATGGACTTCAGTTATTTTGCACCCTTGTAAAACGCAGGCTTCCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]		
Mus musculus	RefSeq	ILMN_237588	ILMN_237588	2610020O08RIK	NM_025937.2	NM_025937.2		67050	31541902	NM_025937.2	2610020O08Rik	NP_080213.2	ILMN_2854659	000450022	S	3993	CCTAGAGCTAGGCAGAGAGAAGGACCAGACAGCTAAGGGCCAGTGGCTGA	X	+	33581975-33582024	XqA3.3	Mus musculus RIKEN cDNA 2610020O08 gene (2610020O08Rik), mRNA.				AI849147; NKAP; AA987160; AL024236	AI849147; NKAP; AA987160; AL024236
Mus musculus	RefSeq	ILMN_208864	ILMN_217463	IL1RAP	NM_134103.1	NM_134103.1		16180	19882202	NM_134103.1	Il1rap	NP_598864.1	ILMN_1243228	005340068	S	1067	GGACTCAGATTTTGAGCATCAAGAAAGTCACCCCGGAGGATCTCAGGCGC	16	+	26701218-26701267	16qB2	Mus musculus interleukin 1 receptor accessory protein (Il1rap), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The chemical reactions and pathways resulting in the formation of interleukin-2 [goid 42094] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IDA]	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955
Mus musculus	RefSeq	ILMN_217463	ILMN_217463	IL1RAP	NM_134103.1	NM_134103.1		16180	19882202	NM_134103.1	Il1rap	NP_598864.1	ILMN_1226650	002940373	S	1497	GCTAGAGCCACATATGGTCAGTGAAGCACAAAGATGCCTTTAGAAGGAAC	16	+	26701648-26701697	16qB2	Mus musculus interleukin 1 receptor accessory protein (Il1rap), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The chemical reactions and pathways resulting in the formation of interleukin-2 [goid 42094] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IDA]	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955	IL-1R AcP; AV239853; 6430709H04Rik; IL-1RAcP; AI255955
Mus musculus	RefSeq	ILMN_191717	ILMN_243639	CD53	NM_007651.2	NM_007651.2		12508	19745182	NM_007651.2	Cd53	NP_031677.1	ILMN_2657478	006560301	S	1477	GTCAGTCTGGTAGCCTTGAATTACATTGCCATAAAACAACCCAGAAGTAT	3	-	106562956-106563005	3qF2.3	Mus musculus CD53 antigen (Cd53), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Ox-44; AI323659; Tspan25	Ox-44; AI323659; Tspan25
Mus musculus	RefSeq	ILMN_221949	ILMN_221949	APOOL	NM_026565.2	NM_026565.2		68117	27754049	NM_026565.2	Apool	NP_080841.1	ILMN_1227426	002650367	S	863	GCAAACAATGGTGAAAAATCACATAATGAACGGGTAACTGACAAAATGTG	X	+	109485942-109485991	XqE1	Mus musculus apolipoprotein O-like (Apool), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]			E130106L15Rik; 9430083G14Rik; RP23-436F2.1; 6720473G16Rik	E130106L15Rik; 9430083G14Rik; RP23-436F2.1; 6720473G16Rik
Mus musculus	Riken	ILMN_202108	ILMN_202108	B3GAT3	ri|2810405M13|ZX00065P18|AK013004|1162					AK013004	B3Gat3		ILMN_1221140	004860327	S	925	GCACAGTGGTAGAACACTCACAAGTGTAAGGCCCTGGGTTGGAGCCCCAG										
Mus musculus	RefSeq	ILMN_198425	ILMN_198425	LOC330416	XM_287637.2	XM_287637.2			38085042	XM_287637.2	LOC330416		ILMN_1240782	006560521	S	413	GCAAGGCTTTCCTCGTGGCTCAGCAGATAAGAGTGCACAGCATGGAAACC										
Mus musculus	RefSeq	ILMN_193623	ILMN_250982	JAM3	NM_023277.3	NM_023277.3		83964	146135071	NM_023277.3	Jam3	NP_075766.1	ILMN_2633439	007560554	S	1739	CAACTTAAGGTAGAAGGCTTGGGCTGCTAGTGTTTAATTGGAAAATACCA				9qA4	Mus musculus junction adhesion molecule 3 (Jam3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	JAM-C; 1110002N23Rik; C85515; Jcam3; JAM-3	JAM-C; 1110002N23Rik; C85515; Jcam3; JAM-3
Mus musculus	RefSeq	ILMN_212040	ILMN_212040	TIPRL	NM_145513.3	NM_145513.3		226591	141801998	NM_145513.3	Tiprl	NP_663488.1	ILMN_2622066	004010600	S	3909	GCTGAGGATAAGCAGTACTTTAAAACACACAGACTGCTGGGAAGCGTGGA	1	-	167142838-167142887	1qH2.3	Mus musculus TIP41, TOR signalling pathway regulator-like (S. cerevisiae) (Tiprl), mRNA.				1810011K17Rik	1810011K17Rik
Mus musculus	RefSeq	ILMN_216389	ILMN_216389	OLFR1384	NM_146472.1	NM_146472.1		258464	33238941	NM_146472.1	Olfr1384	NP_666683.1	ILMN_2670532	004900204	S	889	GGGGCTCTGTGCAAGGTACTTGTAAAAGGAAAAAAGGAGACTAAGACTAG	11	+	49328030-49328079	11qB1.2	Mus musculus olfactory receptor 1384 (Olfr1384), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RP23-58E13.3; MOR256-23	RP23-58E13.3; MOR256-23
Mus musculus	RefSeq	ILMN_238375	ILMN_238375	TRMT2A	NM_001081000.1	NM_001081000.1		15547	124487420	NM_001081000.1	Trmt2a	NP_001074469.1	ILMN_3143116	002350438	A	2277	CAGTTCCCTAGTAAGCAGAGGGTGACTAAGCATTGGTGAGGCGTGAGGCC	16	+	18251043-18251092	16qA3	Mus musculus TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) (Trmt2a), transcript variant 1, mRNA.		Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule [goid 8173] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219696	ILMN_219696	CECR6	NM_033567.1	NM_033567.1		94047	15808997	NM_033567.1	Cecr6	NP_291045.1	ILMN_1248101	006620348	S	4663	CAGGAGTGCCCTGTGTCATCCAACCAAGACTGTGCCTGTTAACCATGCTC	6	-	120439113-120439162	6qF1	Mus musculus cat eye syndrome chromosome region, candidate 6 homolog (human) (Cecr6), mRNA.				AW048664	AW048664
Mus musculus	RefSeq	ILMN_197239	ILMN_197239	LOC236223	XM_135563.3	XM_135563.3			38074729	XM_135563.3	LOC236223		ILMN_2527419	004570192	S	446	GAGATCCATCTGGAGCTTACGTTTTCTGGAAGGCCACAGCAATGGGAAAG										
Mus musculus	RefSeq	ILMN_211874	ILMN_211874	CYP27A1	NM_024264.3	NM_024264.3		104086	31340947	NM_024264.3	Cyp27a1	NP_077226.2	ILMN_2960108	003440014	S	1576	CGGGATGGGAGAAGTAAAGACTGTGTCCCGCATCGTCCTGGTTCCCAGCA	1	+	74670783-74670832	1qC3	Mus musculus cytochrome P450, family 27, subfamily a, polypeptide 1 (Cyp27a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol + NADPH + O2 = 5-beta-cholestane-3-alpha,7-alpha,12-alpha,26-tetraol + NADP+ + H2O [goid 47749] [evidence IEA]	Cyp27; 1300013A03Rik	Cyp27; 1300013A03Rik
Mus musculus	RefSeq	ILMN_211874	ILMN_211874	CYP27A1	NM_024264.3	NM_024264.3		104086	31340947	NM_024264.3	Cyp27a1	NP_077226.2	ILMN_2960114	004010020	S	1732	TGTCACATGTCACGATGTCAGATTCAACAGGAGAACTCTGTGCCCTTCCT	1	+	74670939-74670988	1qC3	Mus musculus cytochrome P450, family 27, subfamily a, polypeptide 1 (Cyp27a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol + NADPH + O2 = 5-beta-cholestane-3-alpha,7-alpha,12-alpha,26-tetraol + NADP+ + H2O [goid 47749] [evidence IEA]	Cyp27; 1300013A03Rik	Cyp27; 1300013A03Rik
Mus musculus	RefSeq	ILMN_209042	ILMN_232432	OLFR846	NM_146282.1	NM_146282.1		258279	22129722	NM_146282.1	Olfr846	NP_666394.1	ILMN_1229446	006100079	S	724	GGGTCTCACCTTTCAGTTGTCTCGTTATTTTATGGTGCAGGAGTTGGAGT	9	-	19165024-19165073	9qA2	Mus musculus olfactory receptor 846 (Olfr846), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR149-3	MOR149-3
Mus musculus	MEEBO	ILMN_191897	ILMN_191897	DNCLI2	scl0234663.1_330				51764297	XM_134573	Dncli2		ILMN_2483172	002350288	S	4	CCGATAGGCTTTCGAATTAAGAAACTGATACGTGACCATTTTATTACCCA										
Mus musculus	RefSeq	ILMN_186732	ILMN_234249	TRAPPC2	NM_025432.1	NM_025432.1		66226	13384831	NM_025432.1	Trappc2	NP_079708.1	ILMN_2438032	004220242	S	1049	ACTAGAGGTTTATTTGAATTTATTAGTATCTGTACTTGGAAAATGTTATA	X	+	161796908-161796957	XqF5	Mus musculus trafficking protein particle complex 2 (Trappc2), mRNA.	A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1810064C02Rik; AW496358; 1110066L09Rik; Sedl; MGC118266; TRS20; MIP-2A	1810064C02Rik; AW496358; 1110066L09Rik; Sedl; MGC118266; TRS20; MIP-2A
Mus musculus	MEEBO	ILMN_223735	ILMN_223735	D16H22S680E	scl027883.1_63	XM_147173.1			20891970	XM_147173.1	D16H22S680E		ILMN_2768364	003520132	S	1149	TCACCTCACACGTTTGGGCAGTGGGTCTCATCCATGGACGGGTAACAAAA										
Mus musculus	RefSeq	ILMN_196587	ILMN_196587	CYP2A5	NM_007812.4	NM_007812.4		13087	147902914	NM_007812.4	Cyp2a5	NP_031838.2	ILMN_1229267	000840114	S	224	CCTGTATTCACCATCTACCTGGGACCTCGCCGAATTGTGGTGCTGTGCGG				7qA3	Mus musculus cytochrome P450, family 2, subfamily a, polypeptide 5 (Cyp2a5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	Coh; Cyp15a2	Coh; Cyp15a2
Mus musculus	RefSeq	ILMN_196587	ILMN_196587	CYP2A5	NM_007812.4	NM_007812.4		13087	147902914	NM_007812.4	Cyp2a5	NP_031838.2	ILMN_2734598	001500180	S	505	TCGGAAGACGAACGGTGCTTTTATTGACCCCACCTTCTACCTTAGCCGAA				7qA3	Mus musculus cytochrome P450, family 2, subfamily a, polypeptide 5 (Cyp2a5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	Coh; Cyp15a2	Coh; Cyp15a2
Mus musculus	RefSeq	ILMN_196560	ILMN_196587	CYP2A5	NM_007812.4	NM_007812.4		13087	147902914	NM_007812.4	Cyp2a5	NP_031838.2	ILMN_1244847	002470010	S	992	ATTGAGGCCAAGGTCCATGAGGAGATTGATCGGGTGATTGGCAGGAACCG				7qA3	Mus musculus cytochrome P450, family 2, subfamily a, polypeptide 5 (Cyp2a5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	Coh; Cyp15a2	Coh; Cyp15a2
Mus musculus	RefSeq	ILMN_213924	ILMN_213924	FIZ1	NM_011813.2	NM_011813.2		23877	31981387	NM_011813.2	Fiz1	NP_035943.2	ILMN_2642313	005390288	S	2381	CCCTTATGCTGTAGAGCACAGTCCTTTGACCACGATTTCCCAATCCTGTG	7	-	4958867-4958916	7qA1	Mus musculus Flt3 interacting zinc finger protein 1 (Fiz1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC117900; AI790204; FLJ00416; mFLJ00416	MGC117900; AI790204; FLJ00416; mFLJ00416
Mus musculus	MEEBO	ILMN_210442	ILMN_210442	LOC406217	scl0406217.3_307				47059052	NM_212457	LOC406217		ILMN_1249794	002650692	S	694	ATTTAATTCAAACATTCCTGTTAGCATGGCAATTTAACCCATTTTAGAAA										
Mus musculus	Riken	ILMN_205067	ILMN_205067	RBBP2	ri|D230045B14|PX00190I17|AK052087|2715					AK052087	Rbbp2		ILMN_1258652	004390246	S	2378	TCCCTTGAGTGTTGTAGTGCGGTGTTTGCAGAGTATCTGCTCCGTATCAC										
Mus musculus	Riken	ILMN_206776	ILMN_206776	SLC13A3	ri|D930050K17|PX00204K14|AK086775|1969					AK086775	Slc13a3		ILMN_1220229	001450189	S	1813	TAGTGGCCTTGTTTGCCACCCCAACCCCCCAAAACCACAAGATGCAGGCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 15362] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197173	ILMN_197173	LOC381349	XM_358555.1	XM_358555.1			38074450	XM_358555.1	LOC381349		ILMN_1225351	006580392	S	474	TCTCCAGGCGCTGAGAAACTCCTGGGACTCGTTTGGGCCTGAACCCACAC										
Mus musculus	RefSeq	ILMN_206290	ILMN_188156	USP29	NM_021323.2	NM_021323.2		57775	114145572	NM_021323.2	Usp29	NP_067298.2	ILMN_1223512	006370446	S	4860	GCCCTCTGACCTCTAGGGAAGCTATCACATGAACACCCATAAACAGATGG	7	+	6917472-6917521	7qA1	Mus musculus ubiquitin specific peptidase 29 (Usp29), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Ocat	Ocat
Mus musculus	RefSeq	ILMN_188156	ILMN_188156	USP29	NM_021323.2	NM_021323.2		57775	114145572	NM_021323.2	Usp29	NP_067298.2	ILMN_1229634	006040243	S	7148	TGGTAGAGTAATGCTACAGCCTACCCCGTCCCCCTCGAGTTGTGGTCTTG	7	+	6919760-6919809	7qA1	Mus musculus ubiquitin specific peptidase 29 (Usp29), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Ocat	Ocat
Mus musculus	MEEBO	ILMN_217230	ILMN_217230	C230040D14	scl0328233.2_67				51829582	XM_488676	C230040D14		ILMN_1213992	004280392	S	2517	TGCTGCTTTGGAGCAGAGCGAGAGCCACGGTGTGCCGCCCCTGGACAGGT										
Mus musculus	RefSeq	ILMN_211086	ILMN_211086	PRPF8	NM_138659.2	NM_138659.2		192159	115583686	NM_138659.2	Prpf8	NP_619600.2	ILMN_2612369	005910202	S	7174	CGACATGATCCCAACATGAAATACGAGCTGCAGCTGGCAAACCCCAAGGA	11	+	75308265-75308314	11qB5	Mus musculus pre-mRNA processing factor 8 (Prpf8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Ribonucleoprotein complex containing small nuclear RNA U5; a component of both the major and minor spliceosome complexes [goid 5682] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	D11Bwg0410e; AU019467; DBF3/PRP8; Prp8; Sfprp8l	D11Bwg0410e; AU019467; DBF3/PRP8; Prp8; Sfprp8l
Mus musculus	RefSeq	ILMN_211086	ILMN_211086	PRPF8	NM_138659.2	NM_138659.2		192159	115583686	NM_138659.2	Prpf8	NP_619600.2	ILMN_2637661	006980762	S	4004	TGCGTGTGGATGATGAGTCAATGCAACGCTTCCATAACCGTGTGCGGCAG	11	+	75303566-75303615	11qB5	Mus musculus pre-mRNA processing factor 8 (Prpf8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Ribonucleoprotein complex containing small nuclear RNA U5; a component of both the major and minor spliceosome complexes [goid 5682] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	D11Bwg0410e; AU019467; DBF3/PRP8; Prp8; Sfprp8l	D11Bwg0410e; AU019467; DBF3/PRP8; Prp8; Sfprp8l
Mus musculus	RefSeq	ILMN_219339	ILMN_219339	GTF2H4	NM_010364.1	NM_010364.1		14885	6754093	NM_010364.1	Gtf2h4	NP_034494.1	ILMN_2997308	007400259	S	1299	CAGACCAGATTCGGCTGTGGGAGCTGGAAAGGGACAGACTCCGGTTCACT	17	-	35276481-35276530	17qB1	Mus musculus general transcription factor II H, polypeptide 4 (Gtf2h4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	p44; AW545633; TFIIH; p52	p44; AW545633; TFIIH; p52
Mus musculus	RefSeq	ILMN_215196	ILMN_215196	H2-M10.4	NM_177634.1	NM_177634.1		224753	29244029	NM_177634.1	H2-M10.4	NP_808302.1	ILMN_2656625	000460685	S	479	GGGAAAAGTAGGTGGAAAATTTAATCCAGACCGGACGCAAGGAAGCGTGA	17	-	36672460-36672509	17qB1	Mus musculus histocompatibility 2, M region locus 10.4 (H2-M10.4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			15H	15H
Mus musculus	RefSeq	ILMN_215196	ILMN_215196	H2-M10.4	NM_177634.1	NM_177634.1		224753	29244029	NM_177634.1	H2-M10.4	NP_808302.1	ILMN_2656626	005890538	S	481	GGAAAAGTAGGTGGAAAATTTAATCCAGACCGGACGCAAGGAAGCGTGAC	17	-	36672458-36672507	17qB1	Mus musculus histocompatibility 2, M region locus 10.4 (H2-M10.4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			15H	15H
Mus musculus	RefSeq	ILMN_220115	ILMN_220115	VWA3A	NM_177697.3	NM_177697.3		233813	117320532	NM_177697.3	Vwa3a	NP_808365.2	ILMN_2717788	003800132	S	4319	GGTACCAGTAGCCTAGCTTGGCGAAAGACGCAGCCAAGAGCCAAGTCTAC	7	+	127948799-127948848	7qF2	Mus musculus von Willebrand factor A domain containing 3A (Vwa3a), mRNA.					
Mus musculus	RefSeq	ILMN_185359	ILMN_216401	TROVE2	NM_013835.2	NM_013835.2		20822	134133269	NM_013835.2	Trove2	NP_038863.1	ILMN_2426380	002600301	S	8521	GGTCTATGGAACTTTCCACGGGCATTATGTTAACACTCTCAAGTTTCCAG	1	-	145598070-145598119	1qF	Mus musculus TROVE domain family, member 2 (Trove2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI646302; A530054J02Rik; SS-A/Ro; 1810007I17Rik; Ssa2; Ssa	AI646302; A530054J02Rik; SS-A/Ro; 1810007I17Rik; Ssa2; Ssa
Mus musculus	RefSeq	ILMN_188779	ILMN_233422	TOP1MT	NM_028404.2	NM_028404.2		72960	141801374	NM_028404.2	Top1mt	NP_082680.1	ILMN_2455637	004490575	S	1828	GCCGCTGAAATGTTCTTTCTCACTGTGAAGCAGTATTGTGGTTTTTCTAG	15	-	75487480-75487529	15qD3	Mus musculus DNA topoisomerase 1, mitochondrial (Top1mt), nuclear gene encoding mitochondrial protein, mRNA.			Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IEA]	2900052H09Rik	2900052H09Rik
Mus musculus	MEEBO	ILMN_190161	ILMN_190161	GNAS	scl0071358.1_234				47271395	NM_010309	Gnas		ILMN_1252926	004900403	S	13	TCACCCTTCCAGTGACAATTACGTCATTCCTTCATCGCCTCATGAGTTTA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS];  [goid 6112] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]		
Mus musculus	Riken	ILMN_206164	ILMN_206164	D030015B04RIK	ri|D030015B04|PX00178P11|AK083439|3210					AK083439	D030015B04Rik		ILMN_1244503	004250497	S	2873	GGCTGATTGGCTACAGGTGTCGAGTTGTGAAAGTACCTGGGCCCTTGGCC										
Mus musculus	Riken	ILMN_205264	ILMN_205264	E330017C12RIK	ri|E330017C12|PX00212A01|AK054337|2113					AK054337	E330017C12Rik		ILMN_1217300	001400671	S	1878	CATGGCAGGAAACAGAGAGGCACAGCACTGGGACAATAGCTGGGAGCTTT										
Mus musculus	RefSeq	ILMN_209202	ILMN_209202	IGTP	NM_018738.3	NM_018738.3		16145	141801713	NM_018738.3	Igtp	NP_061208.2	ILMN_2593554	006290037	S	1737	AGGCTGCCTCAGGGTCTTTTTGCTTAGAGCCCTAGCTAGTCACTAGAAAG	11	+	58020808-58020857	11qB1.3	Mus musculus interferon gamma induced GTPase (Igtp), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]	AW558444	AW558444
Mus musculus	RefSeq	ILMN_188739	ILMN_258503	CAMK4	NM_009793.2	NM_009793.2		12326	142377596	NM_009793.2	Camk4	NP_033923.1	ILMN_2708107	003170435	S	2948	GAGGTTTCTCCAGGCTGTTAGAGTGTCAGCACTTCAGCAGGTCAAGCACA	18	+	33346353-33346402	18qB1	Mus musculus calcium/calmodulin-dependent protein kinase IV (Camk4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IMP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence TAS]	D18Bwg0362e; A430110E23Rik; CaMKIV/Gr; CaMKIV; AI666733	D18Bwg0362e; A430110E23Rik; CaMKIV/Gr; CaMKIV; AI666733
Mus musculus	RefSeq	ILMN_214943	ILMN_238738	4833423E24RIK	NM_001081664.1	NM_001081664.1		228151	126157489	NM_001081664.1	4833423E24Rik	NP_001075133.1	ILMN_1241916	006110634	S	1933	AAGGGAAGACACTCTACTTTTTCATTAGGGTTAAAATTGGACTTAGTTCC	2	-	85324040-85324089	2qD	Mus musculus RIKEN cDNA 4833423E24 gene (4833423E24Rik), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water [goid 16717] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	Gm113	Gm113
Mus musculus	RefSeq	ILMN_193068	ILMN_212975	MTIF3	NM_029581.3	NM_029581.3		76366	142367401	NM_029581.3	Mtif3	NP_083857.1	ILMN_2493815	007570438	S	1272	GTGAGGCCTGCTTGGCGTCTGTCCATCCGCATACCCCATCCTGCGTGTCT	5	-	147766743-147766792	5qG3	Mus musculus mitochondrial translational initiation factor 3 (Mtif3), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The disaggregation of a ribosome into its constituent components; includes the dissociation of ribosomal subunits [goid 32790] [evidence ISS]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence ISS]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any part of the small ribosomal subunit [goid 43024] [evidence ISS]	2810012L14Rik; AI414549	2810012L14Rik; AI414549
Mus musculus	RefSeq	ILMN_212975	ILMN_212975	MTIF3	NM_029581.3	NM_029581.3		76366	142367401	NM_029581.3	Mtif3	NP_083857.1	ILMN_2632187	000450196	S	1206	ACACCCTCAGCAGGCACAGACACGCAGGATGGGGTATGCGGATGGACAGA	5	-	147766809-147766858	5qG3	Mus musculus mitochondrial translational initiation factor 3 (Mtif3), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The disaggregation of a ribosome into its constituent components; includes the dissociation of ribosomal subunits [goid 32790] [evidence ISS]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence ISS]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any part of the small ribosomal subunit [goid 43024] [evidence ISS]	2810012L14Rik; AI414549	2810012L14Rik; AI414549
Mus musculus	RefSeq	ILMN_211702	ILMN_211702	TMEM106C	NM_201359.1	NM_201359.1		380967	41235746	NM_201359.1	Tmem106c	NP_958747.1	ILMN_2618696	003850064	S	1452	CCCCATACAAAGTGATTACAGTTTCCCCCGCAAGGGTCTATCGAAGGGCT	15	+	97800584-97800633	15qF1	Mus musculus transmembrane protein 106C (Tmem106c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			MGC54819; D15Ertd405e; AI046681; BC046621	MGC54819; D15Ertd405e; AI046681; BC046621
Mus musculus	RefSeq	ILMN_214561	ILMN_227075	LOC243431	XM_991819.1	XM_991819.1		243431	94378704	XM_991819.1	LOC243431	XP_996913.1	ILMN_2649286	004220100	S	37	TTGTTGCTCTGGTTTCCAGGTACCAGATGTGACATCCAGATGACCCAGTC				6qC1	PREDICTED: Mus musculus similar to Ig kappa chain V-V region MOPC 41 precursor (LOC243431), mRNA.					
Mus musculus	MEEBO	ILMN_212874	ILMN_212874	9130023H24RIK	scl30619.1.4_211	NM_177001.2			31342563	NM_177001.2	9130023H24Rik		ILMN_2631218	006400563	S	3167	CCTGGTTAGGGGAATGGCTTAGTAAGCCTCAGTTCTCAAATCTGGGGTCT										
Mus musculus	MEEBO	ILMN_223122	ILMN_223122	4930544O15RIK	scl23968.2.1_218				51709406	XM_485433	4930544O15Rik		ILMN_1243985	007400672	S	646	GCTGTAGTTTCCTCTTAGTGAGGGTGGGAGCTGCAAGTACCAAAGGCTCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_252599	ILMN_252599	TRIM75	NM_001033429.1	NM_001033429.1		333307	85701940	NM_001033429.1	Trim75	NP_001028601.1	ILMN_2984717	005290470	S	2161	AGTCAACCGGGCTAGCCTTGACTAACTTTACAACCCAGCCTGGTCCAGCC	8	-	67505845-67505894	8qB3.1	Mus musculus tripartite motif-containing 75 (Trim75), mRNA. XM_921187	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm794	Gm794
Mus musculus	RefSeq	ILMN_220397	ILMN_228613	E030049G20RIK	NM_001081756.1	NM_001081756.1		210356	126362960	NM_001081756.1	E030049G20Rik	NP_001075225.1	ILMN_2721512	000430372	S	4690	GGTCATGTTGTGCATTCAGGAGAATGTGGAAAAGGGCCAAGTGCAGACAA	1	-	127921231-127921280	1qE3	Mus musculus RIKEN cDNA E030049G20 gene (E030049G20Rik), transcript variant 1, mRNA.				Erih2; MGC90557; Nap5; 8430408F21; Erih1; D130011D22Rik; Gm1548	Erih2; MGC90557; Nap5; 8430408F21; Erih1; D130011D22Rik; Gm1548
Mus musculus	RefSeq	ILMN_228613	ILMN_228613	E030049G20RIK	NM_001081756.1	NM_001081756.1		210356	126362960	NM_001081756.1	E030049G20Rik	NP_001075225.1	ILMN_3146603	006770341	A	5410	GATTGGAACCTTTCCCCTCCCAGACTCAGGAAACCGCTCAGTGGGACGAT	1	-	127878190-127878239	1qE3	Mus musculus RIKEN cDNA E030049G20 gene (E030049G20Rik), transcript variant 1, mRNA.				Erih2; MGC90557; Nap5; 8430408F21; Erih1; D130011D22Rik; Gm1548	Erih2; MGC90557; Nap5; 8430408F21; Erih1; D130011D22Rik; Gm1548
Mus musculus	RefSeq	ILMN_212914	ILMN_228613	E030049G20RIK	NM_001081756.1	NM_001081756.1		210356	126362960	NM_001081756.1	E030049G20Rik	NP_001075225.1	ILMN_2631591	004390653	S	6981	GCCTACAGACCAGGCAGACTAGAGCTATGTTTAGGATTTGTGTGGTTACC	1	-	127810395-127810444	1qE3	Mus musculus RIKEN cDNA E030049G20 gene (E030049G20Rik), transcript variant 1, mRNA.				Erih2; MGC90557; Nap5; 8430408F21; Erih1; D130011D22Rik; Gm1548	Erih2; MGC90557; Nap5; 8430408F21; Erih1; D130011D22Rik; Gm1548
Mus musculus	Riken	ILMN_203298	ILMN_203298	C430048N08RIK	ri|C430048N08|PX00080D07|AK049593|1923					AK049593	C430048N08Rik		ILMN_2556233	005910685	S	1530	AACTGGGAAGTTGGAAGGATGGTCTGGGACATCGTGTGGGGTAACTGTCC										
Mus musculus	RefSeq	ILMN_241785	ILMN_241785	OTTMUSG00000007485	NM_001012323.1	NM_001012323.1		381530	59858560	NM_001012323.1	OTTMUSG00000007485	NP_001012323.1	ILMN_2881950	001170092	S	840	GAATTTCTTCCTCTTCCTGTTCAATAAATGATTACACTTGCACTTAAAAA	4	-	61618148-61618150:61711268-61711314	4qB3	Mus musculus predicted gene, OTTMUSG00000007485 (OTTMUSG00000007485), mRNA.			Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence IDA]	MGC103310; MGC107671	MGC103310; MGC107671
Mus musculus	RefSeq	ILMN_196504	ILMN_196504	NKPD1	XM_133219.7	XM_133219.7		69547	149256329	XM_133219.7	Nkpd1	XP_133219.7	ILMN_2677668	004060382	S	2611	CCACACACCCTGATGACTTTGGAAGCCAAGGGGAAGCAGGTACTACTAGC	7	+	20110257-20110306	7qA3	PREDICTED: Mus musculus NTPase, KAP family P-loop domain containing 1 (Nkpd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_196504	ILMN_196504	NKPD1	XM_133219.7	XM_133219.7		69547	149256329	XM_133219.7	Nkpd1	XP_133219.7	ILMN_1214468	002490110	S	2384	GCACGTCCCATGCGGGCCAAGGATCAGGACACAGTAAAGAGGCACATCAG	7	+	20110030-20110079	7qA3	PREDICTED: Mus musculus NTPase, KAP family P-loop domain containing 1 (Nkpd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_187966	ILMN_233229	TTC9	NM_001033149.2	NM_001033149.2		69480	142380851	NM_001033149.2	Ttc9	NP_001028321.1	ILMN_2448678	006660373	S	1967	CCTTTTCAAAGCACTTTCATGTATTTTTCGTGTGACTTAGTGAGACACTA	12	+	82765853-82765902	12qD1	Mus musculus tetratricopeptide repeat domain 9 (Ttc9), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI429215; AI853559; 1700029M07Rik	AI429215; AI853559; 1700029M07Rik
Mus musculus	RefSeq	ILMN_222319	ILMN_222319	SOX17	NM_011441.4	NM_011441.4		20671	146134353	NM_011441.4	Sox17	NP_035571.1	ILMN_2747986	003460189	S	2493	GGGCTACACGAGATTTTTGTTTTAAATGCCTTGAGGGACTTGCTCCCCAC				1qA1	Mus musculus SRY-box containing gene 17 (Sox17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Sox	Sox
Mus musculus	Riken	ILMN_206107	ILMN_206107	2810439F02RIK	ri|B430203J24|PX00071A02|AK080904|3244					AK080904	2810439F02Rik		ILMN_1216935	001710400	S	3134	CAGTGGTCCCTGAACCCAGATGGCTGGAAAACGACCTTCCAGGATTTGCT										
Mus musculus	MEEBO	ILMN_222105	ILMN_222105	MAP3K7	scl0002804.1_11				13879375	BC006665	Map3k7		ILMN_2744665	002370195	S	1375	GGGGCCACCGTAAAACCGCTTCATTTGGCAACATTCTGGATGTCCCTGAG							Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The process of introducing a phosphate group into an I-kappaB protein [goid 7252] [evidence IGI]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IGI]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217942	ILMN_217942	PIPOX	NM_008952.1	NM_008952.1		19193	6679506	NM_008952.1	Pipox	NP_032978.1	ILMN_2916202	004200709	S	1340	CTCCTTCCCAGAAAGTCAGCGAGATTCACCATCACAGAACAGCAAGGGGC	11	-	77694413-77694462	11qB5	Mus musculus pipecolic acid oxidase (Pipox), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin moiety [goid 46653] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: sarcosine + H2O + O2 = glycine + formaldehyde + H2O2 [goid 8115] [evidence IEA]; Catalysis of the reaction: L-pipecolate + O2 = 2,3,4,5-tetrahydropyridine-2-carboxylate + H2O2 [goid 50031] [evidence IEA]	LPIPOX; Pso	LPIPOX; Pso
Mus musculus	RefSeq	ILMN_217942	ILMN_217942	PIPOX	NM_008952.1	NM_008952.1		19193	6679506	NM_008952.1	Pipox	NP_032978.1	ILMN_2689581	003060487	S	1149	TCTCTACGCTGAGCAAAGCCCACCTTTGACCCCAGCTGACTCTCTCCTGG	11	-	77694604-77694625:77694626-77694653	11qB5	Mus musculus pipecolic acid oxidase (Pipox), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin moiety [goid 46653] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: sarcosine + H2O + O2 = glycine + formaldehyde + H2O2 [goid 8115] [evidence IEA]; Catalysis of the reaction: L-pipecolate + O2 = 2,3,4,5-tetrahydropyridine-2-carboxylate + H2O2 [goid 50031] [evidence IEA]	LPIPOX; Pso	LPIPOX; Pso
Mus musculus	RefSeq	ILMN_212052	ILMN_226684	RNASEH2B	NM_026001.2	NM_026001.2		67153	142343619	NM_026001.2	Rnaseh2b	NP_080277.1	ILMN_2622209	001850524	S	630	CGCTATGCCCATGGTCTGATCTCTGATTACATCCCTAAAGAACTGAGTGA	14	+	62982878-62982927	14qD1	Mus musculus ribonuclease H2, subunit B (Rnaseh2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2610207P08Rik; 1110019N06Rik; Dleu8	2610207P08Rik; 1110019N06Rik; Dleu8
Mus musculus	RefSeq	ILMN_212281	ILMN_212281	MED27	NM_026896.3	NM_026896.3		68975	146141100	NM_026896.3	Med27	NP_081172.2	ILMN_2624703	005420504	S	998	ACAGCCCGACCCATTCACCACACAGGAGTCTACCACTGTTCTCCCTGGCA				2qB	Mus musculus mediator complex subunit 27 (Med27), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]	1500015J03Rik; D2Ertd434e; AA682045; Crsp8; 2310042P07Rik	1500015J03Rik; D2Ertd434e; AA682045; Crsp8; 2310042P07Rik
Mus musculus	Riken	ILMN_204330	ILMN_204330	FBLN1	ri|6030434L12|PX00056N16|AK031454|4019					AK031454	Fbln1		ILMN_1223682	001050167	S	3887	GTAGGACCACAGTGACATCAAGGACTAGAGATGTTCAGTGCAGAGGCCCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218929	ILMN_218929	OLFR1051	NM_207562.1	NM_207562.1		404324	46430575	NM_207562.1	Olfr1051	NP_997445.1	ILMN_2702078	002480037	S	566	GTTCACATGTAGAGGAGACAGAATTATTGACTATACTGTTTTCAGCCTTC	2	-	86116027-86116076	2qD	Mus musculus olfactory receptor 1051 (Olfr1051), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR187-5	MOR187-5
Mus musculus	RefSeq	ILMN_216012	ILMN_216012	OIT3	NM_010959.1	NM_010959.1		18302	27545184	NM_010959.1	Oit3	NP_035089.1	ILMN_2781596	005810435	S	2581	TGGCTCCATATACCCAGAATATCAGTATTCTGTGCCCTGGGTTAGATAAG	10	-	58818402-58818451	10qB4	Mus musculus oncoprotein induced transcript 3 (Oit3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	EF-9; LZP	EF-9; LZP
Mus musculus	RefSeq	ILMN_218605	ILMN_218605	1810065E05RIK	NM_027239.1	NM_027239.1		69864	21312451	NM_027239.1	1810065E05Rik	NP_081515.1	ILMN_1241864	005220669	S	637	GGTTGGATCTGGCTGTGCGACAGAAAGCGCCTGTAACCTGAATATGACCG	11	+	58239235-58239284	11qB1.3	Mus musculus RIKEN cDNA 1810065E05 gene (1810065E05Rik), mRNA.				RP23-465K20.5; AV047390	RP23-465K20.5; AV047390
Mus musculus	RefSeq	ILMN_213902	ILMN_213902	3110035E14RIK	NM_178399.2	NM_178399.2		76982	31341585	NM_178399.2	3110035E14Rik	NP_848486.1	ILMN_2846297	006100347	S	2745	GCTCTGGATAAACTGAAACATGGCGGTAAGTCAAACCCAGACTTCCAGGC	1	+	9611914-9611963	1qA2	Mus musculus RIKEN cDNA 3110035E14 gene (3110035E14Rik), mRNA.				AV164974; R75066; AI415019	AV164974; R75066; AI415019
Mus musculus	RefSeq	ILMN_196956	ILMN_196956	LOC381285	XM_355225.1	XM_355225.1			38050419	XM_355225.1	LOC381285		ILMN_2526382	000830703	S	543	TTACCAAACTATGTCAGACACCGCGTTCAAGGCCTTGCGCCGGCAGCTTC										
Mus musculus	RefSeq	ILMN_196121	ILMN_221891	BACH1	NM_007520.2	NM_007520.2		12013	82659113	NM_007520.2	Bach1	NP_031546.1	ILMN_1238701	005340184	S	5658	CATAATATAATTTTTCTAACTGCAATAAAACCACTGAACTTATATATTCC	16	+	87733391-87733440	16qC3.3	Mus musculus BTB and CNC homology 1 (Bach1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	6230421P05Rik; AI323795	6230421P05Rik; AI323795
Mus musculus	RefSeq	ILMN_221891	ILMN_221891	BACH1	NM_007520.2	NM_007520.2		12013	82659113	NM_007520.2	Bach1	NP_031546.1	ILMN_2741677	001990487	S	3089	GGCTGTCGATCATCTCATTGCAGGTCGTTGATGACCATGAGGGCATTGGA	16	+	87730822-87730871	16qC3.3	Mus musculus BTB and CNC homology 1 (Bach1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	6230421P05Rik; AI323795	6230421P05Rik; AI323795
Mus musculus	RefSeq	ILMN_234841	ILMN_234841	2810030E01RIK	NM_028317.1	NM_028317.1		72668	55926232	NM_028317.1	2810030E01Rik	NP_082593.1	ILMN_2896976	006100672	S	2460	GCGTATTCCTTAAACACCACTAAGGATTCCCAACCTCCTCACAAGGCCCA	2	-	17967315-17967364	2qA3	Mus musculus RIKEN cDNA 2810030E01 gene (2810030E01Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC59463; BB088113	MGC59463; BB088113
Mus musculus	RefSeq	ILMN_234841	ILMN_234841	2810030E01RIK	NM_028317.1	NM_028317.1		72668	55926232	NM_028317.1	2810030E01Rik	NP_082593.1	ILMN_2896979	002060747	S	2341	ACAGACGCAAAAAGGTAGCCAGCAATGTAGCATCAGCAGTGAAAAGGCCA	2	-	17967434-17967483	2qA3	Mus musculus RIKEN cDNA 2810030E01 gene (2810030E01Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC59463; BB088113	MGC59463; BB088113
Mus musculus	MEEBO	ILMN_220319	ILMN_220319	OLFR1083	scl0404326.1_326	NM_207564.1			46430579	NM_207564.1	Olfr1083		ILMN_2720537	004150438	S	884	AGATGCAAAAGATGCCATAGAAAGAACCTGGAAAAAGATAGTTACCAGTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190240	ILMN_190240	5630401D06RIK	scl31196.1.22_140						5630401D06Rik		ILMN_2468405	006290408	S	13	CATGCCAAGGGTCCAGGCTGCTGTAGTCCACCTGTGCCCTACTCATTTGG										
Mus musculus	RefSeq	ILMN_208638	ILMN_208638	TM2D3	NM_178056.2	NM_178056.2		68634	31341817	NM_178056.2	Tm2d3	NP_835157.1	ILMN_2696537	000620162	S	794	CCGCTGGCTCAGGCAATAAAGGATCCGGGCCCAACACGTACATTCTCTGT	7	+	72840101-72840150	7qC	Mus musculus TM2 domain containing 3 (Tm2d3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110025I09Rik; 5930422O05Rik; Blp2	1110025I09Rik; 5930422O05Rik; Blp2
Mus musculus	RefSeq	ILMN_210729	ILMN_208638	TM2D3	NM_178056.2	NM_178056.2		68634	31341817	NM_178056.2	Tm2d3	NP_835157.1	ILMN_2608574	005810228	S	1135	AAATTCCACCACCTGCATGACCGTGGCTTGCCCTCGGCAGCGCTATTTCG	7	+	72844031-72844053:72846479-72846505	7qC	Mus musculus TM2 domain containing 3 (Tm2d3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110025I09Rik; 5930422O05Rik; Blp2	1110025I09Rik; 5930422O05Rik; Blp2
Mus musculus	RefSeq	ILMN_208638	ILMN_208638	TM2D3	NM_178056.2	NM_178056.2		68634	31341817	NM_178056.2	Tm2d3	NP_835157.1	ILMN_1235089	003610112	S	322	CCCTGGCTTCATGGGTCAGCGGAACTAAAATGGGCTAACCACATCGCATC	7	+	72838149-72838198	7qC	Mus musculus TM2 domain containing 3 (Tm2d3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110025I09Rik; 5930422O05Rik; Blp2	1110025I09Rik; 5930422O05Rik; Blp2
Mus musculus	RefSeq	ILMN_197579	ILMN_197579	LOC212084	XM_139220.2	XM_139220.2			38076672	XM_139220.2	LOC212084		ILMN_2528623	005910376	S	213	ACCTAAGGTGGCGAAGATGCACCTGAGGGACATGGTCATCCTACCCAAGA										
Mus musculus	RefSeq	ILMN_252610	ILMN_252610	C77080	NM_001033189.1	NM_001033189.1		97130	75677515	NM_001033189.1	C77080	NP_001028361.1	ILMN_2850198	005550136	S	3035	TGAACTTCGGAGCATTTCAGAGCATCGGCCACCTCCCCAGGCCCAGAAGA	4	-	128724321-128724370	4qD2.2	Mus musculus expressed sequence C77080 (C77080), mRNA.				mKIAA1522	mKIAA1522
Mus musculus	RefSeq	ILMN_212223	ILMN_212223	OLFR1428	NM_146678.1	NM_146678.1		258673	33239017	NM_146678.1	Olfr1428	NP_666889.1	ILMN_1244582	004120403	S	602	CCAACAATGGCCTGGTAACCCTGTTGTGGTTCTTCCTGCTCTTAGGCTCC	19	-	12183383-12183432	19qA	Mus musculus olfactory receptor 1428 (Olfr1428), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR239-5; MGC140907	MOR239-5; MGC140907
Mus musculus	RefSeq	ILMN_213915	ILMN_213915	CYP2C54	NM_206537.1	NM_206537.1		404195	45504401	NM_206537.1	Cyp2c54	NP_996260.1	ILMN_1241818	001660373	S	257	TCTGGTTGACCATGGGGATGTCTTTGCTGGAAGGGGAAGGCTCCCAGTTT	19	-	40146881-40146930	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 54 (Cyp2c54), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	EG404195	EG404195
Mus musculus	RefSeq	ILMN_223833	ILMN_244582	OLFR1013	NM_146762.2	NM_146762.2		258757	121583642	NM_146762.2	Olfr1013	NP_666973.2	ILMN_1226609	004060358	S	423	GTGTTTTGTGGTAGCCTCATATGTGGGTGGTTTTATTAACTCTGTGATCA	2	+	85610382-85610431	2qD	Mus musculus olfactory receptor 1013 (Olfr1013), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR213-2	MOR213-2
Mus musculus	MEEBO	ILMN_187060	ILMN_187060	SP100	scl17729.23.8_7				7305512	NM_013673	Sp100		ILMN_1241356	003060041	S	1376	GGAAACTGTGAAAAAGCCAAGAACTGGCGGCAAACGATCCGCTGCAAGGG						A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214396	ILMN_260531	SNAI2	NM_011415.2	NM_011415.2		20583	42476308	NM_011415.2	Snai2	NP_035545.1	ILMN_2647563	004010632	S	1394	GAAGAGAGTCTGCCAGACACTATCTCAGGTGCCTTATAAAGTACTCCAAG	16	+	14708858-14708907	16qA1	Mus musculus snail homolog 2 (Drosophila) (Snai2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IMP]; Any process that modulates the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45884] [evidence IC ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Snail2; Slug; Slugh	Snail2; Slug; Slugh
Mus musculus	MEEBO	ILMN_193270	ILMN_193270	A430090L17RIK	scl44357.1.1_160				31342569	NM_177004	A430090L17Rik		ILMN_2604134	006860202	S	3580	CCCTCCCACTTTAGCTTCTTTTAAGATGGACCCGTGTCAAAAGTTCCCAG										
Mus musculus	MEEBO	ILMN_193270	ILMN_193270	A430090L17RIK	scl44357.1.1_160				31342569	NM_177004	A430090L17Rik		ILMN_1228541	004060241	S	8	CCAATCGTGTGAGAATCTTTCTTCTAACCCATGACTGTATCCATACCTTG										
Mus musculus	MEEBO	ILMN_211517	ILMN_211517	SON	scl0020658.1_193	NM_178880.3			34850741	NM_178880.3	Son		ILMN_2670834	003780156	S	8062	TCAGCTACACCTAGATAGACGTAAATAAAAATGCTGTAACCGACTTATCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210613	ILMN_311708	LOC100045117	XR_031345.1	XR_031345.1		100045117	149270891	XR_031345.1	LOC100045117		ILMN_2703566	005490279	S	504	TTTCGAGGCCGAATACCGACTTGGCCCCCTCCTGGGTAAGGGAGGCTTTG					PREDICTED: Mus musculus similar to Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 (LOC100045117), misc RNA.					
Mus musculus	RefSeq	ILMN_211950	ILMN_211950	ETHE1	NM_023154.3	NM_023154.3		66071	62990178	NM_023154.3	Ethe1	NP_075643.1	ILMN_2621074	005960435	S	1295	TGCAAATATGCGCTGTGGGGTCCAGACTCCACCCTCCTGATTCGTCCCAG	7	+	25393755-25393794:25393795-25393804	7qA3	Mus musculus ethylmalonic encephalopathy 1 (Ethe1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Hsco; 0610025L15Rik; MGC102424	Hsco; 0610025L15Rik; MGC102424
Mus musculus	RefSeq	ILMN_196463	ILMN_229357	MOBKL1A	NM_026735.2	NM_026735.2		68473	118600996	NM_026735.2	Mobkl1a	NP_081011.1	ILMN_2606966	004540161	S	1992	GGTGCCCATACTTACAGTTTGGGAGACTTCCTTTTAGAGATCAGCTTCCA	5	+	89186301-89186350	5qE1	Mus musculus MOB1, Mps One Binder kinase activator-like 1A (yeast) (Mobkl1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	B230364F10; MGC129510; 1110003E08Rik; AU015450; MGC129511	B230364F10; MGC129510; 1110003E08Rik; AU015450; MGC129511
Mus musculus	RefSeq	ILMN_229357	ILMN_229357	MOBKL1A	NM_026735.2	NM_026735.2		68473	118600996	NM_026735.2	Mobkl1a	NP_081011.1	ILMN_2895536	004560746	S	3027	CCAGTCCTAGAAACTAGTGCTTGACAGCAGACTTACCACTCCGTGTGGAG	5	+	89187336-89187385	5qE1	Mus musculus MOB1, Mps One Binder kinase activator-like 1A (yeast) (Mobkl1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	B230364F10; MGC129510; 1110003E08Rik; AU015450; MGC129511	B230364F10; MGC129510; 1110003E08Rik; AU015450; MGC129511
Mus musculus	RefSeq	ILMN_198752	ILMN_198752	EG236891	XM_141933.2	XM_141933.2		236891	38087231	XM_141933.2	EG236891	XP_141933.2	ILMN_1222520	003710739	S	992	TGCCTGGCCATGTTGTGGATGTCAGGGATGTCAGGACTCATCGCAGATCC	X	+	88871725-88871774	XqC2	PREDICTED: Mus musculus predicted gene, EG236891 (EG236891), mRNA.					
Mus musculus	RefSeq	ILMN_209442	ILMN_209442	CLSTN3	NM_153508.2	NM_153508.2		232370	31981949	NM_153508.2	Clstn3	NP_705728.1	ILMN_2827217	006940711	S	3779	TATTTTTTCAATGTTGTCGTGAGCGCAGCTCCTGTGTTTCTGTGTGCAGC	6	-	124396493-124396542	6qF2	Mus musculus calsyntenin 3 (Clstn3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cst-3; mKIAA0726; Cs3; CSTN3	Cst-3; mKIAA0726; Cs3; CSTN3
Mus musculus	Riken	ILMN_206538	ILMN_206538	1810062O14RIK	ri|1810062O14|ZX00043I14|AK075803|1711					AK075803	1810062O14Rik		ILMN_2580847	006180068	S	1	GAGGTGCAGCAAGGAGCCTGTGACACTGGGGTCCAGGGCAGAATGGCCCA										
Mus musculus	RefSeq	ILMN_261502	ILMN_261502	E430002G05RIK	NM_173749.3	NM_173749.3		210622	31982079	NM_173749.3	E430002G05Rik	NP_776110.2	ILMN_2870864	003170603	S	2592	ATCAGTTTGGGTTGAGAAGGTTGATTTGGGGAGGCCTGGGCTGCACCTGG	2	+	102482964-102483013	2qE2	Mus musculus RIKEN cDNA E430002G05 gene (E430002G05Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Ramp; 5930437L24	Ramp; 5930437L24
Mus musculus	RefSeq	ILMN_217635	ILMN_217635	RGS9BP	NM_145840.3	NM_145840.3		243923	148539898	NM_145840.3	Rgs9bp	NP_665839.1	ILMN_1237501	003890167	S	6405	GAGTTGAGTGTTGCTTGCGTGGCTATGGATGTATTAGGTGTGTGGAAGCG				7qB2	Mus musculus regulator of G-protein signalling 9 binding protein (Rgs9bp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of events involved in visual perception in which a sensory light stimulus is received by a cell and converted into a molecular signal [goid 50908] [evidence IMP]		Rgs9-1bp; R9AP	Rgs9-1bp; R9AP
Mus musculus	RefSeq	ILMN_228308	ILMN_228308	MRPS33	NM_001010930.1	NM_001010930.1		14548	58331152	NM_001010930.1	Mrps33	NP_001010930.1	ILMN_3163302	006400470	A	368	CCCGAGTATTAGAGGAACATGACTTCCCTCAGTAGACGCCAACCCTGTGT	6	-	39752324-39752373	6qB1	Mus musculus mitochondrial ribosomal protein S33 (Mrps33), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gdap3; CGI-139; PTD003; AI841153; MRP-S33; MGC106490	Gdap3; CGI-139; PTD003; AI841153; MRP-S33; MGC106490
Mus musculus	Riken	ILMN_204096	ILMN_204096	9830002L24RIK	ri|9830002L24|PX00117N11|AK036384|4415					AK036384	9830002L24Rik		ILMN_1255901	002650703	S	4144	GCAATGCTGACCCACACTGGAGACGGGAGCCCTTGACAGTAGACCTGATC										
Mus musculus	RefSeq	ILMN_214121	ILMN_214121	MFSD3	NM_027122.2	NM_027122.2		69572	31560111	NM_027122.2	Mfsd3	NP_081398.2	ILMN_2644477	006100129	S	855	ATGGTGCTTCTGCCTCAGACTTGGGGCTATGGAGTGGCTTGGGTGCTGTG	15	+	76529944-76529993	15qD3	Mus musculus major facilitator superfamily domain containing 3 (Mfsd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	2310010G13Rik	2310010G13Rik
Mus musculus	RefSeq	ILMN_214417	ILMN_214417	RAB13	NM_026677.1	NM_026677.1		68328	21311974	NM_026677.1	Rab13	NP_080953.1	ILMN_2647792	005390161	S	436	CTGGGAAACAAGTGTGACATGGAGGCCAAGCGGCAGGTGCAGAGAGAGCA	3	+	90310450-90310499	3qF1	Mus musculus RAB13, member RAS oncogene family (Rab13), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	B230212B15Rik; 0610007N03Rik	B230212B15Rik; 0610007N03Rik
Mus musculus	RefSeq	ILMN_218665	ILMN_218665	BYSL	NM_016859.2	NM_016859.2		53414	46560590	NM_016859.2	Bysl	NP_058555.2	ILMN_2698719	005810671	S	2785	GTTTGTATATCTGAGAAGGTTTGGTCTGTTGAGTTCATATTTGCTTACAC	17	-	47737291-47737340	17qC	Mus musculus bystin-like (Bysl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Enp1; Bys	Enp1; Bys
Mus musculus	RefSeq	ILMN_236599	ILMN_236599	OLFR735	NM_001011754.1	NM_001011754.1		257909	58801295	NM_001011754.1	Olfr735	NP_001011754.1	ILMN_3160906	005870164	S	834	CACCTGTGCTTCTCACTTGACGGTGGTCAGCCTGATCTTTGTACCCTGTG	14	-	50965232-50965281	14qC1	Mus musculus olfactory receptor 735 (Olfr735), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR243-1	MOR243-1
Mus musculus	RefSeq	ILMN_223186	ILMN_223186	MAPK8IP1	NM_011162.4	NM_011162.4		19099	146134467	NM_011162.4	Mapk8ip1	NP_035292.2	ILMN_2760485	001110347	S	2190	CGTGCATTTCAGCAGTTCTACAAGCAGTTTGTGGAGTATACCTGTCCTAC				2qE1	Mus musculus mitogen-activated protein kinase 8 interacting protein 1 (Mapk8ip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]	Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of introducing a phosphate group into a JUN protein [goid 7258] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [evidence NAS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IPI]	Skip; Prkm8ip; mjip-2a; JIP-1; IB1	Skip; Prkm8ip; mjip-2a; JIP-1; IB1
Mus musculus	RefSeq	ILMN_189845	ILMN_189845	AMZ2	NM_025275.4	NM_025275.4		13929	115496472	NM_025275.4	Amz2	NP_079551.3	ILMN_2464898	005960471	S	1149	CCGGCGTCCTCTGAATGTTTGCCCTATCTGCTTACGAAAGCTGCAGAGTG	11	+	109295989-109296038	11qE1	Mus musculus archaelysin family metallopeptidase 2 (Amz2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	ESTM12; AA408420; Amz2	ESTM12; AA408420; Amz2
Mus musculus	RefSeq	ILMN_192254	ILMN_247880	TECT1	NM_001039153.2	NM_001039153.2		654470	109809734	NM_001039153.2	Tect1	NP_001034242.2	ILMN_2486390	001580538	S	1548	CGGGCCCAGGATGTGCAGGACTGGGTGCCTGTGCACTTTGTCACCTACTC	5	-	122695521-122695570	5qF	Mus musculus tectonic 1 (Tect1), mRNA.					
Mus musculus	RefSeq	ILMN_207482	ILMN_247880	TECT1	NM_001039153.2	NM_001039153.2		654470	109809734	NM_001039153.2	Tect1	NP_001034242.2	ILMN_1260568	000990386	I	1442	CTGACAGCCAGACTGCACATTGTAGCCAAATAGCACAGGGGTGCGAAGCC	5	-	122695627-122695672:122696494-122696497	5qF	Mus musculus tectonic 1 (Tect1), mRNA.					
Mus musculus	Riken	ILMN_205904	ILMN_205904	A830022K22RIK	ri|A830022K22|PX00154B17|AK043708|1289					AK043708	A830022K22Rik		ILMN_1238892	004290477	S	1098	AGTACAGAACCTGTCAGAGTGGAGGCTTGCTGCCCAGAGAGAAGGACCCC										
Mus musculus	RefSeq	ILMN_197030	ILMN_322064	LOC435651	XR_031375.1	XR_031375.1		435651	149245282	XR_031375.1	LOC435651		ILMN_1243881	002060176	S	492	GGTCGGGAACTGTTTTGAGGAATACAGCGGTGCTGTCGTGAACATCTGCA	1	-	164558666-164558715	1qH2.1	PREDICTED: Mus musculus similar to oocyte-specific eukaryotic translation initiation factor 4E-like (LOC435651), misc RNA.					
Mus musculus	RefSeq	ILMN_209870	ILMN_209870	NCOR1	NM_011308.2	NM_011308.2		20185	68299754	NM_011308.2	Ncor1	NP_035438.2	ILMN_2599997	004640358	S	7165	TCAGTGGTGACGAGCAGCGAGGCACGGAGAGATGAAGGGGAGCCATCACC	11	-	62134505-62134554	11qB2	Mus musculus nuclear receptor co-repressor 1 (Ncor1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	mKIAA1047; 5730405M06Rik; N-CoR; Rxrip13; RIP13; A230020K14Rik	mKIAA1047; 5730405M06Rik; N-CoR; Rxrip13; RIP13; A230020K14Rik
Mus musculus	RefSeq	ILMN_191803	ILMN_209870	NCOR1	NM_011308.2	NM_011308.2		20185	68299754	NM_011308.2	Ncor1	NP_035438.2	ILMN_1213703	001820475	S	6337	CCTGCTGGGACCGATAATGATGCAGTGGACCTTCATACTGTCGAGTGGAC	11	-	62143538-62143587	11qB2	Mus musculus nuclear receptor co-repressor 1 (Ncor1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	mKIAA1047; 5730405M06Rik; N-CoR; Rxrip13; RIP13; A230020K14Rik	mKIAA1047; 5730405M06Rik; N-CoR; Rxrip13; RIP13; A230020K14Rik
Mus musculus	Riken	ILMN_202168	ILMN_202168	ZFHX1A	ri|3110032K11|ZX00071N09|AK014114|998					AK014114	Zfhx1a		ILMN_1251561	005700154	S	749	AAACTTGGCCAGGCATCTGGGAAGTGCAGGACTCTCTGAGAAGTGGCTCC										
Mus musculus	RefSeq	ILMN_229152	ILMN_229152	USP48	NM_130879.2	NM_130879.2		170707	114053324	NM_130879.2	Usp48	NP_570949.2	ILMN_3002971	005310458	S	4034	GAGCTCCGTAGGATAGCACGGGTTTTCATAGACAGCCCTCCCGCTCTCCA	4	+	137212740-137212789	4qD3	Mus musculus ubiquitin specific peptidase 48 (Usp48), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	MGC25724; Usp31; BC021769; 2810449C13Rik; AI115503; D330022K21Rik	MGC25724; Usp31; BC021769; 2810449C13Rik; AI115503; D330022K21Rik
Mus musculus	RefSeq	ILMN_259590	ILMN_259590	UBE3A	NM_011668.2	NM_011668.2		22215	76880493	NM_011668.2	Ube3a	NP_035798.2	ILMN_3155274	005290097	A	2972	TCCAGGCACTAGAAGAAACTACAGAGTATGACGGTGGCTATACGAGGGAA	7	+	66544087-66544136	7qC	Mus musculus ubiquitin protein ligase E3A (Ube3a), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	KIAA4216; Hpve6a; A130086L21Rik; 5830462N02Rik; mKIAA4216; 4732496B02	KIAA4216; Hpve6a; A130086L21Rik; 5830462N02Rik; mKIAA4216; 4732496B02
Mus musculus	RefSeq	ILMN_218574	ILMN_218574	NOPE	NM_020043.2	NM_020043.2		56741	146231955	NM_020043.2	Nope	NP_064427.2	ILMN_2697499	002230687	S	5935	TCTGTTGGCCTTTTACAGGGCATTAGTCCCTTTGTCGTTTGCCATGGATG				9qC	Mus musculus neighbor of Punc E11 (Nope), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]			DDM36; 9330155G14Rik; WI-18508; mKIAA1628	DDM36; 9330155G14Rik; WI-18508; mKIAA1628
Mus musculus	MEEBO	ILMN_191573	ILMN_191573	RGS3	scl25373.30_5				9506438	NM_019492	Rgs3		ILMN_2610678	006380100	S	482	GCCAGACCACACAGATCATTCCAGACTGCCGAGACCCAGCTTTCCACGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191573	ILMN_191573	RGS3	scl25373.30_5				9506438	NM_019492	Rgs3		ILMN_1255271	000510592	S	1	GAGGAGCAGATTCACAGAGAGAAGTCTGTGGGGGCATGGCTCATAGTAGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	Riken	ILMN_205556	ILMN_205556	STIM1	ri|5830485P11|PX00041K03|AK031003|3839					AK031003	Stim1		ILMN_1216313	004280138	S	3620	GGCACATGATTATTGTCCCGACACTCAAGAGGCAGAGGTAGAGGCAGGTG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197117	ILMN_241534	EG432721	XM_484210.5	XM_484210.5		432721	149263814	XM_484210.5	EG432721	XP_484210.1	ILMN_1254838	001170132	S	12	CCGGTCCCAGGCACTTCGGGAGCCGCGGGTTACTGTGCAGACATGGCCAA	13	+	4613384-4613425:4613426-4613433	13qA1	PREDICTED: Mus musculus predicted gene, EG432721 (EG432721), mRNA.					
Mus musculus	Riken	ILMN_201846	ILMN_201846	5730531E12RIK	ri|5730531E12|PX00006I13|AK017800|1414					AK017800	5730531E12Rik		ILMN_1241407	006040441	S	556	AGGAGTTCTGGTGGAAGACCTCAACCCCGAGAAGACCCCAAACTGGCTGC										
Mus musculus	MEEBO	ILMN_188580	ILMN_188580	PEX11C	scl35158.6_20				21735444	NM_026951	Pex11c		ILMN_2453891	005090142	S	20	GACATGGAACCAAAGGACAGATACTTCTAGAAAAGGCAGCCCACCCGAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments [goid 16559] [evidence IEA]			
Mus musculus	MEEBO	ILMN_188580	ILMN_188580	PEX11C	scl35158.6_20				21735444	NM_026951	Pex11c		ILMN_2467365	002360435	S	20	TCGAGCAGGTGGGACCACCAGAGATAGGAGCTGATCCTGGCCTACTCATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments [goid 16559] [evidence IEA]			
Mus musculus	RefSeq	ILMN_187167	ILMN_240531	ADAMTS10	NM_172619.2	NM_172619.2		224697	91064868	NM_172619.2	Adamts10	NP_766207.2	ILMN_1229828	001450021	S	3654	GAGAGAGGACTCCTTGTTGCACACATATTTAAGTCCCTAGCACCCCTCCC	17	+	33690344-33690393	17qB1	Mus musculus a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10 (Adamts10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	9430006O18; MGC118623; AW045948; ZnMP	9430006O18; MGC118623; AW045948; ZnMP
Mus musculus	MEEBO	ILMN_195296	ILMN_195296	2600005C20RIK	scl0072462.1_197				28076996	NM_028244	2600005C20Rik		ILMN_2595282	000150646	S	1956	GACAGCATCCAGCACCCTTGACCCCTGTGATCCGTCCAGTCAAAAACCAG										
Mus musculus	RefSeq	ILMN_200560	ILMN_200560	LOC384348	XM_357593.1	XM_357593.1			38083727	XM_357593.1	LOC384348		ILMN_1258330	001850239	S	567	ATCGAATTACCTGAAGGGGAACTGGTCGCAGGAGCTGGAGAGGTTGCAGG										
Mus musculus	MEEBO	ILMN_219155	ILMN_219155	9230101D24RIK	scl21168.5.1_82	NM_177840.2			31342878	NM_177840.2	9230101D24Rik		ILMN_2704962	000770161	S	1263	GTGGTACTGGCGCTGATTGGCTGCTCTCCTAGGCTCTTGCTTGGGTTCAA										
Mus musculus	RefSeq	ILMN_230063	ILMN_230063	GLT8D2	NM_029102.1	NM_029102.1		74782	58037388	NM_029102.1	Glt8d2	NP_083378.1	ILMN_2836637	004860446	S	1671	CAGGGGCTCTGACATTCTCTTCTGGCCTTCACAGGCACTGGGTACACATG	10	-	82080664-82080713	10qC1	Mus musculus glycosyltransferase 8 domain containing 2 (Glt8d2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	1110021D20Rik; MGC100315	1110021D20Rik; MGC100315
Mus musculus	RefSeq	ILMN_218880	ILMN_218880	ANKS3	NM_028301.2	NM_028301.2		72615	142361387	NM_028301.2	Anks3	NP_082577.1	ILMN_2735877	006400551	S	2326	CAGGTGCCATACTGAGGTCTGATCTTACAGACAAGGTCTGGGGTGCCTAG	16	-	4941474-4941523	16qA1	Mus musculus ankyrin repeat and sterile alpha motif domain containing 3 (Anks3), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C81345; 2700067D09Rik; mKIAA1977	C81345; 2700067D09Rik; mKIAA1977
Mus musculus	RefSeq	ILMN_218880	ILMN_218880	ANKS3	NM_028301.2	NM_028301.2		72615	142361387	NM_028301.2	Anks3	NP_082577.1	ILMN_2701383	004850446	S	277	GGACAGCGCTGATGTATGCCTCCTACATTGGACACGATACCATTGTTCAC	16	-	4958170-4958219	16qA1	Mus musculus ankyrin repeat and sterile alpha motif domain containing 3 (Anks3), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C81345; 2700067D09Rik; mKIAA1977	C81345; 2700067D09Rik; mKIAA1977
Mus musculus	RefSeq	ILMN_218512	ILMN_218512	GPC2	NM_172412.2	NM_172412.2		71951	144226221	NM_172412.2	Gpc2	NP_766000.1	ILMN_2696721	005860093	S	2436	CACATCCATCACAAACTTCCACTTCATATTTCAGTGTTCATATCAGTGTC	5	-	138714915-138714964	5qG2	Mus musculus glypican 2 (cerebroglycan) (Gpc2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]			MGC90563; 2410016G05Rik	MGC90563; 2410016G05Rik
Mus musculus	RefSeq	ILMN_246858	ILMN_246858	BTBD6	NM_201646.1	NM_201646.1		399566	42517137	NM_201646.1	Btbd6	NP_964008.1	ILMN_2839682	007560730	S	1808	TGACTTCTCACAGCCCGTGTCGGCTGACCCTAGACAGCATTCCACAGGTG	12	+	114216892-114216941	12qF1	Mus musculus BTB (POZ) domain containing 6 (Btbd6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209375	ILMN_209375	MPP1	NM_008621.2	NM_008621.2		17524	31982179	NM_008621.2	Mpp1	NP_032647.1	ILMN_3161936	002480398	S	1294	GCTGAGCTTTCACCTTTCATTGTGTTCATCGCACCTACTGACCAGGGCAC	X	-	72363154-72363203	XqA7.3	Mus musculus membrane protein, palmitoylated (Mpp1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C130070C03Rik; 55kDa	C130070C03Rik; 55kDa
Mus musculus	RefSeq	ILMN_214883	ILMN_258488	PROC	NM_001042768.1	NM_001042768.1		19123	112421045	NM_001042768.1	Proc	NP_001036233.1	ILMN_2653056	004010491	S	1436	GTGGGCACACCAACAACTATGGCATCTACACCAAAGTGGGAAGCTACCTC	18	-	32282943-32282992	18qB1	Mus musculus protein C (Proc), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of blood coagulation [goid 30195] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence NAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	PC	PC
Mus musculus	RefSeq	ILMN_200547	ILMN_200547	LOC383324	XM_356984.1	XM_356984.1			38083600	XM_356984.1	LOC383324		ILMN_2539145	001110386	S	5	CCTTCCAGAAGCCCAGGGGGAAAGCGCTGATTCCAGAGCTGACAGCAGAG										
Mus musculus	RefSeq	ILMN_209658	ILMN_209658	PGPEP1	NM_023217.2	NM_023217.2		66522	31560232	NM_023217.2	Pgpep1	NP_075706.1	ILMN_2846254	002490521	S	1855	GGATGCCACCTTCTCTTTTGTGGATGGATAGAGACCTCGGTGTCCCCACG	8	-	73578345-73578394	8qB3.3	Mus musculus pyroglutamyl-peptidase I (Pgpep1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]	PGPI; PGP; Pcp; 2810003H13Rik; PGP-I	PGPI; PGP; Pcp; 2810003H13Rik; PGP-I
Mus musculus	RefSeq	ILMN_209658	ILMN_209658	PGPEP1	NM_023217.2	NM_023217.2		66522	31560232	NM_023217.2	Pgpep1	NP_075706.1	ILMN_2846255	004220193	S	2078	GTGCTGGGCCTGGCTACTTTTAAGCTCTAGTGTTCCTTGTTCTGATGTGG	8	-	73578122-73578171	8qB3.3	Mus musculus pyroglutamyl-peptidase I (Pgpep1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]	PGPI; PGP; Pcp; 2810003H13Rik; PGP-I	PGPI; PGP; Pcp; 2810003H13Rik; PGP-I
Mus musculus	RefSeq	ILMN_215965	ILMN_215965	CHST5	NM_019950.2	NM_019950.2		56773	110815848	NM_019950.2	Chst5	NP_064334.1	ILMN_2665754	001340164	S	1547	CCTTTCTCGTTGACTCTCTCCCCTCTTTGATCATACCATGCAATCGCAGA	8	-	114413373-114413422	8qE1	Mus musculus carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 (Chst5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IDA]; The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione [goid 6790] [evidence IDA]; The chemical reactions and pathways resulting in the formation of keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues [goid 18146] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-acetyl-D-glucosamine = adenosine 3',5'-bisphosphate + N-acetyl-D-glucosamine 6-sulfate [goid 1517] [evidence IDA]	AI173964; I-GlcNAc-6-ST; GST-4	AI173964; I-GlcNAc-6-ST; GST-4
Mus musculus	RefSeq	ILMN_196221	ILMN_245167	GNAI1	NM_010305.1	NM_010305.1		14677	74271898	NM_010305.1	Gnai1	NP_034435.1	ILMN_2592815	002470040	S	1018	GTTTACAGACACGTCCATCATCCTTTTCCTCAACAAGAAGGACCTCTTCG	5	-	17777694-17777743	5qA3	Mus musculus guanine nucleotide binding protein (G protein), alpha inhibiting 1 (Gnai1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Gnai-1; AU046200; Gialpha1	Gnai-1; AU046200; Gialpha1
Mus musculus	RefSeq	ILMN_215736	ILMN_215736	SFRS12	NM_172592.2	NM_172592.2		218543	118129995	NM_172592.2	Sfrs12	NP_766180.1	ILMN_2662996	001300670	S	3563	CCTTACCTCATGAAGAGTTATGTTCACAGACTGAAAAAGCCAAGTAGCAC	13	-	104532145-104532194	13qD1	Mus musculus splicing factor, arginine/serine-rich 12 (Sfrs12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI450757; SRrp508; SRrp86; 8430401B01; AI462342	AI450757; SRrp508; SRrp86; 8430401B01; AI462342
Mus musculus	RefSeq	ILMN_215736	ILMN_215736	SFRS12	NM_172592.2	NM_172592.2		218543	118129995	NM_172592.2	Sfrs12	NP_766180.1	ILMN_1217577	006770014	S	168	GCAGCCAACACGAACGGTTGTCATGTGTAACACAACTTTCGATCACCGCG	13	-	104554445-104554494	13qD1	Mus musculus splicing factor, arginine/serine-rich 12 (Sfrs12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI450757; SRrp508; SRrp86; 8430401B01; AI462342	AI450757; SRrp508; SRrp86; 8430401B01; AI462342
Mus musculus	MEEBO	ILMN_194705	ILMN_194705	MT-ND6	scl0017722.1_181						mt-Nd6		ILMN_1238153	007560477	S	18	CCAACAAACCCACTAACAATTAAACCTAAACCTCCATAAATAGGTGAAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214610	ILMN_227795	KLHDC9	NM_001033039.2	NM_001033039.2		68874	142357547	NM_001033039.2	Klhdc9	NP_001028211.1	ILMN_1217812	005050138	S	1200	GGGAGGCACTCTGTGTTGTGGCAAACCTACAAAGCGATCTCATCAGAGCT	1	-	173288885-173288934	1qH3	Mus musculus kelch domain containing 9 (Klhdc9), mRNA.				ESTM31; 1190002J23Rik; AA087357	ESTM31; 1190002J23Rik; AA087357
Mus musculus	RefSeq	ILMN_220314	ILMN_220314	LPGAT1	NM_172266.2	NM_172266.2		226856	118130036	NM_172266.2	Lpgat1	NP_758470.1	ILMN_2720479	006760450	S	1229	CTATTTTAGGAATTGACTTGGACTTGCTACATAGGAGTTCAGACTTCTTC	1	+	193602405-193602413:193602414-193602454	1qH6	Mus musculus lysophosphatidylglycerol acyltransferase 1 (Lpgat1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KIAA0205; MGC18768; BC013667; AI649174	KIAA0205; MGC18768; BC013667; AI649174
Mus musculus	RefSeq	ILMN_199868	ILMN_199868	LOC381528	XM_355489.1	XM_355489.1			38078434	XM_355489.1	LOC381528		ILMN_1256780	006040328	S	698	GAGTCACCTGCTATTGCCAGCAGCCACAACGCCTCAGGGAAGCCTATACC										
Mus musculus	RefSeq	ILMN_219716	ILMN_219716	ARHGEF10L	NM_172415.2	NM_172415.2		72754	40254211	NM_172415.2	Arhgef10l	NP_766003.2	ILMN_2726433	003840689	S	799	CGTCAGGACTAAGAGAGACATCTTGGCTTTGAGAGTTGGGGGTAGAGACA	4	-	140142730-140142779	4qD3	Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like (Arhgef10l), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]	2810441C07Rik; mKIAA1626	2810441C07Rik; mKIAA1626
Mus musculus	RefSeq	ILMN_219716	ILMN_219716	ARHGEF10L	NM_172415.2	NM_172415.2		72754	40254211	NM_172415.2	Arhgef10l	NP_766003.2	ILMN_2726432	004050446	S	797	ACGTCAGGACTAAGAGAGACATCTTGGCTTTGAGAGTTGGGGGTAGAGAC	4	-	140142732-140142781	4qD3	Mus musculus Rho guanine nucleotide exchange factor (GEF) 10-like (Arhgef10l), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]	2810441C07Rik; mKIAA1626	2810441C07Rik; mKIAA1626
Mus musculus	RefSeq	ILMN_189696	ILMN_330319	LOC100046793	XM_001476823.1	XM_001476823.1		100046793	149255599	XM_001476823.1	LOC100046793	XP_001476873.1	ILMN_2463573	006330239	S	24	CAGCTTCCTGCTAATCAGTGCCTCAGTCATAATGTCCAGAGGACAAATTG					PREDICTED: Mus musculus similar to light chain of the monoclonal antibody MST2 (LOC100046793), mRNA.					
Mus musculus	RefSeq	ILMN_190389	ILMN_330319	LOC100046793	XM_001476823.1	XM_001476823.1		100046793	149255599	XM_001476823.1	LOC100046793	XP_001476873.1	ILMN_2469743	006960673	S	15	GCAGATTTTCAGCTTCCTGCTAATCAGTGCCTCAGTCATAATGTCCAGAG					PREDICTED: Mus musculus similar to light chain of the monoclonal antibody MST2 (LOC100046793), mRNA.					
Mus musculus	RefSeq	ILMN_212338	ILMN_212338	IFI35	NM_027320.4	NM_027320.4		70110	146141138	NM_027320.4	Ifi35	NP_081596.1	ILMN_2625290	004120014	S	483	AGGAACACAGAGTTAACTTAGAGGACTGCCGGCTGCGGGTGCAGGTCCAG				11qD	Mus musculus interferon-induced protein 35 (Ifi35), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			IFP35; 2010008K16Rik; AW986054	IFP35; 2010008K16Rik; AW986054
Mus musculus	RefSeq	ILMN_220008	ILMN_220008	PRR3	NM_145487.2	NM_145487.2		75210	34328353	NM_145487.2	Prr3	NP_663462.2	ILMN_2797322	001570711	S	2577	CAGCAGTGAACATGGTGGGTTTTGAACAGGCCCTACGGAAGTGGGTCAGG	17	-	36109586-36109635	17qB1	Mus musculus proline-rich polypeptide 3 (Prr3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	CAT56; 4930540G07Rik	CAT56; 4930540G07Rik
Mus musculus	RefSeq	ILMN_192317	ILMN_245281	ATP6V0A2	NM_011596.4	NM_011596.4		21871	148747156	NM_011596.4	Atp6v0a2	NP_035726.2	ILMN_2747311	006220201	S	2747	CCGGTCAGAACTTACCAGGGGAAAGTTCCACCCTCGTTGATTGCCTTACG				5qF	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A2 (Atp6v0a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TJ6M; ATP6a2; AI385560; Atp6n2; C76904; Tj6; Stv1; 8430408C20Rik; AW489264; TJ6s; MGC124342; MGC124341; Atp6n1d	TJ6M; ATP6a2; AI385560; Atp6n2; C76904; Tj6; Stv1; 8430408C20Rik; AW489264; TJ6s; MGC124342; MGC124341; Atp6n1d
Mus musculus	Riken	ILMN_203961	ILMN_203961	A530020H22RIK	ri|A530020H22|PX00140B12|AK079944|1233					AK079944	A530020H22Rik		ILMN_1245693	000990017	S	898	CTTCTGGGAGAATCACCATTCCTGTTCCAAGCAGTTCTATAGAGCAGTCA										
Mus musculus	MEEBO	ILMN_190269	ILMN_190269	MARK1	scl15807.17_339				21704013	NM_145515	Mark1		ILMN_2468657	007570487	S	18	TTGTCTTTGGCTCTTTCTCGAGCTGTGAATCACCTGTTTGCTGCTTGGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209646	ILMN_209646	RMND1	NM_025343.3	NM_025343.3		66084	86198295	NM_025343.3	Rmnd1	NP_079619.3	ILMN_2955535	001170022	S	1683	AAGCAGGCAGATCCTGATGTCCAGAGCAGCCCTGGCTACACAGGGAAACG	10	+	5943224-5943273	10qA1	Mus musculus required for meiotic nuclear division 1 homolog (S. cerevisiae) (Rmnd1), mRNA.				AW536662; AI462664; 0610042C05Rik; AA408137	AW536662; AI462664; 0610042C05Rik; AA408137
Mus musculus	RefSeq	ILMN_217328	ILMN_217328	CHRNA2	NM_144803.2	NM_144803.2		110902	133892762	NM_144803.2	Chrna2	NP_659052.1	ILMN_2681916	005490333	S	3247	GCTCTCCTTCCGAACCCCACACACAGCACCTCGACAGACCTAGGAGATCT	14	+	66771505-66771554	14qD1	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal) (Chrna2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IEA]	BC011490; Acra-2; Acra2; MGC18795	BC011490; Acra-2; Acra2; MGC18795
Mus musculus	RefSeq	ILMN_207485	ILMN_207485	FZD7	XM_123681.1	XM_123681.1			20847562	XM_123681.1	Fzd7		ILMN_2587820	000450138	I	17	AGAAGCTTGTTGCTCGTCGCCGCAGAGAAAGCCGCACCGTTACGTCTCGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216023	ILMN_311954	LOC100048301	XM_001480232.1	XM_001480232.1		100048301	149257015	XM_001480232.1	LOC100048301	XP_001480282.1	ILMN_2666438	001410068	S	606	ATCATCGCAGACGTGTCCCAGGACCCCACGTTGCCCCGGACGGAGGACCA					PREDICTED: Mus musculus similar to RNA Polymerase II subunit 14.5 kD (LOC100048301), mRNA.					
Mus musculus	RefSeq	ILMN_213368	ILMN_213368	SCOTIN	NM_026381.3	NM_026381.3		66940	146135010	NM_026381.3	Scotin	NP_080657.1	ILMN_2636360	000540524	S	19	AACTGAGTGGCCTCTGATGAAAAGAGGGGAAGTCCTGGGCTGCAGGAGCC				9qF2	Mus musculus scotin gene (Scotin), transcript variant 2, mRNA.				6430628I05Rik; 2310008D10Rik	6430628I05Rik; 2310008D10Rik
Mus musculus	RefSeq	ILMN_209352	ILMN_213368	SCOTIN	NM_026381.3	NM_026381.3		66940	146135010	NM_026381.3	Scotin	NP_080657.1	ILMN_2651077	006960674	S	1287	CCAGTTTGTCCCAGTAGCAGGGACACCAAGGCCAATGGGTTATCTGGACC				9qF2	Mus musculus scotin gene (Scotin), transcript variant 2, mRNA.				6430628I05Rik; 2310008D10Rik	6430628I05Rik; 2310008D10Rik
Mus musculus	RefSeq	ILMN_199692	ILMN_199692	LOC383819	XM_357277.1	XM_357277.1			38076187	XM_357277.1	LOC383819		ILMN_1253489	002120288	S	223	GGCTTCAAGGGGTCACAAGGAAGATCAGTGCCTGCTGACTCTGGGATCAG										
Mus musculus	Riken	ILMN_205133	ILMN_205133	9430046I01RIK	ri|9430046I01|PX00109K15|AK034843|2529					AK034843	9430046I01Rik		ILMN_1260152	002970435	S	2445	GCCATATTCGGTAGATGTCCTTGGGTAGAAGGGCGGGTAACTGCGGTCAA										
Mus musculus	RefSeq	ILMN_215706	ILMN_215706	SVIL	NM_178046.2	NM_178046.2		225115	31341499	NM_178046.2	Svil	NP_835147.1	ILMN_2662648	003180612	S	918	GCCAAGTCTCGGAAGGACCCAGATGTGACTGAGAGACGAGGAAAAAGTGA	18	+	5049116-5049165	18qA1	Mus musculus supervillin (Svil), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	B430302E16Rik; AU024053	B430302E16Rik; AU024053
Mus musculus	RefSeq	ILMN_211903	ILMN_245102	PACS2	NM_001081170.1	NM_001081170.1		217893	124487180	NM_001081170.1	Pacs2	NP_001074639.1	ILMN_2620583	000510687	S	5388	CTGTCCCATGCGACCATGTGGACGATTTCAAGGTGCTGAAGCGACACTAA	12	+	114312520-114312569	12qF1	Mus musculus phosphofurin acidic cluster sorting protein 2 (Pacs2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Pacs1l; AW489976; mKIAA0602; AW208651; E230011J22; 6720425G15Rik	Pacs1l; AW489976; mKIAA0602; AW208651; E230011J22; 6720425G15Rik
Mus musculus	RefSeq	ILMN_217813	ILMN_217813	RAB23	NM_008999.3	NM_008999.3		19335	142377153	NM_008999.3	Rab23	NP_033025.2	ILMN_2687881	003850021	S	2926	GTGTGTGGTCTGTCTCTTTAAAACAGTGTCTGGTGATGGCTGCCGTTTCC	1	+	33798014-33798063	1qB	Mus musculus RAB23, member RAS oncogene family (Rab23), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45861] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	opb; AW545388; opb2	opb; AW545388; opb2
Mus musculus	RefSeq	ILMN_236984	ILMN_236984	OLFR1352	NM_147071.1	NM_147071.1		259074	49227375	NM_147071.1	Olfr1352	NP_667282.1	ILMN_3161761	006020347	S	777	CCTCAGTTCTGCAGTAAGTCACAGCTCACAAGCAAGTGCAACAGCCTCTG	10	+	78447313-78447362	10qC1	Mus musculus olfactory receptor 1352 (Olfr1352), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR139-1	MOR139-1
Mus musculus	RefSeq	ILMN_228521	ILMN_228521	AU023871	NM_001033221.2	NM_001033221.2		106722	141802318	NM_001033221.2	AU023871	NP_001028393.1	ILMN_3161372	003610131	S	1873	GCCCTCAGAGAGTTTCTCCACAATGTTCTCCCTACAATACTCGTTGGCTC	17	-	35201524-35201573	17qB1	Mus musculus expressed sequence AU023871 (AU023871), mRNA.					
Mus musculus	RefSeq	ILMN_185522	ILMN_224754	OGFRL1	XM_973033.1	XM_973033.1		70155	94364886	XM_973033.1	Ogfrl1	XP_978127.1	ILMN_1236107	002000356	S	1815	GCCGGTTGTCATGCTGAGGTAGTGGCACAGCAAAATGCCACAAACCCCCA				1qA5	PREDICTED: Mus musculus opioid growth factor receptor-like 1 (Ogfrl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196677	ILMN_196677	DOCK1	XM_194386.3	XM_194386.3			38087466	XM_194386.3	Dock1		ILMN_1250773	007330370	S	5901	CAGTCTGGAGCTGAACGGCATGATGGGAATGGATGTGGCCGATGTCCCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_201903	ILMN_201903	4933424N09RIK	ri|4933424N09|PX00020K08|AK016902|1242					AK016902	4933424N09Rik		ILMN_1257748	006580523	S	883	CCTGAAATTTGGGCCACACCCTCTGGTGGCAGCCTAGAGAAAGGATGTGC										
Mus musculus	RefSeq	ILMN_210407	ILMN_210407	DPYD	NM_170778.2	NM_170778.2		99586	118130082	NM_170778.2	Dpyd	NP_740748.1	ILMN_2605329	001850139	S	4080	GCGCTGAGCCATAGGCTTCAAGATTCAACAACAAAGTGTGTCATATCTGA	3	+	119135479-119135528	3qG1	Mus musculus dihydropyrimidine dehydrogenase (Dpyd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of pyrimidine bases, 1,3-diazine, organic nitrogenous bases [goid 6208] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (S)-dihydroorotate + O2 = orotate + H2O2 [goid 4158] [evidence IEA]; Catalysis of the reaction: (S)-dihydroorotate + acceptor = orotate + reduced acceptor [goid 4152] [evidence IEA]; Catalysis of the reaction: 5,6-dihydrouracil + NADP+ = uracil + NADPH + H+ [goid 17113] [evidence IDA]	E330028L06Rik; AI315208; DPD; MGC37940	E330028L06Rik; AI315208; DPD; MGC37940
Mus musculus	Riken	ILMN_207407	ILMN_207407	G630008F16RIK	ri|G630008F16|PL00013K15|AK090163|1347					AK090163	G630008F16Rik		ILMN_2587365	005890079	S	964	CCACGGAGGGGACTCAAGGTAACCCCAAATTACTGGGCTTTGAACTTCCA										
Mus musculus	RefSeq	ILMN_216543	ILMN_216543	HOXC5	NM_175730.4	NM_175730.4		15424	146198781	NM_175730.4	Hoxc5	NP_783857.1	ILMN_1230286	001980463	S	2451	GTTGAAGGAGGAAGTACTTTACAGGAGAAACAAACGCACGGAATGGGCCC				15qF3	Mus musculus homeo box C5 (Hoxc5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	AI181837; Hox-6.2; Hox-3.4	AI181837; Hox-6.2; Hox-3.4
Mus musculus	RefSeq	ILMN_190064	ILMN_241327	D4ERTD196E	XM_975887.1	XM_975887.1		52174	94373842	XM_975887.1	D4Ertd196e	XP_980981.1	ILMN_1239980	002850671	S	266	GATCAAGAGTGGAGTCAGACCATCCCGGAACCACATCTTTGGACCTTCAG				4qD2.3	PREDICTED: Mus musculus DNA segment, Chr 4, ERATO Doi 196, expressed, transcript variant 1 (D4Ertd196e), mRNA.					
Mus musculus	RefSeq	ILMN_194791	ILMN_228764	BPTF	NM_176850.2	NM_176850.2		207165	140969816	NM_176850.2	Bptf	NP_789820.2	ILMN_1247699	004860167	S	6618	GCAGCTCATGCAAGCTGCAATGCCGAATGGCACCGTTCAGCGTTTCCTCT	11	-	106917266-106917315	11qE1	Mus musculus bromodomain PHD finger transcription factor (Bptf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence ISS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence ISS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]	Falz; MGC54978; 9430093H17Rik	Falz; MGC54978; 9430093H17Rik
Mus musculus	RefSeq	ILMN_194791	ILMN_228764	BPTF	NM_176850.2	NM_176850.2		207165	140969816	NM_176850.2	Bptf	NP_789820.2	ILMN_1235943	002510437	S	7347	GATCCAGTCGCAGGTTGTGGCTCAGATACAGGCCCAGCAAAGTGGTGTGC	11	-	106915984-106916033	11qE1	Mus musculus bromodomain PHD finger transcription factor (Bptf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence ISS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence ISS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]	Falz; MGC54978; 9430093H17Rik	Falz; MGC54978; 9430093H17Rik
Mus musculus	RefSeq	ILMN_194791	ILMN_228764	BPTF	NM_176850.2	NM_176850.2		207165	140969816	NM_176850.2	Bptf	NP_789820.2	ILMN_2509623	003120332	S	8912	TTGGCCAATTTTGTCCAACGGACAAAGGAAAAGCAAAGTCAACGGCACCG	11	-	106896921-106896970	11qE1	Mus musculus bromodomain PHD finger transcription factor (Bptf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence ISS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence ISS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]	Falz; MGC54978; 9430093H17Rik	Falz; MGC54978; 9430093H17Rik
Mus musculus	RefSeq	ILMN_196725	ILMN_318359	LOC100041230	XM_001476063.1	XM_001476063.1		100041230	149263931	XM_001476063.1	LOC100041230	XP_001476113.1	ILMN_1246576	005890411	S	54	AAAGGAGGAAAAGGCCTGGGCAAAGGCGGCGCCAAGCGCCACCGCAAAGT	13	+	21903668-21903717	13qA3.1	PREDICTED: Mus musculus similar to histone H4 (LOC100041230), mRNA.					
Mus musculus	RefSeq	ILMN_219423	ILMN_219423	B3GAT1	NM_029792.1	NM_029792.1		76898	30794189	NM_029792.1	B3gat1	NP_084068.1	ILMN_2708717	007150551	S	3148	AACCCTGGTGGACTGCGGCCTTCATCTCTGTTGGGAATGAGTTTGTTGCA	9	+	26568645-26568694	9qA4	Mus musculus beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) (B3gat1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence TAS]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]; Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 15018] [evidence IEA]	HNK-1; mKIAA4235; KIAA4235; 0710007K08Rik; GlcAT-P; AI846286	HNK-1; mKIAA4235; KIAA4235; 0710007K08Rik; GlcAT-P; AI846286
Mus musculus	RefSeq	ILMN_219423	ILMN_219423	B3GAT1	NM_029792.1	NM_029792.1		76898	30794189	NM_029792.1	B3gat1	NP_084068.1	ILMN_2724433	004200196	S	1558	TGGGGTGAGGGAGGTCAGAAAACCCTACTGTGGAGTGCAGCATGGCTCTC	9	+	26567055-26567104	9qA4	Mus musculus beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) (B3gat1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence TAS]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]; Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 15018] [evidence IEA]	HNK-1; mKIAA4235; KIAA4235; 0710007K08Rik; GlcAT-P; AI846286	HNK-1; mKIAA4235; KIAA4235; 0710007K08Rik; GlcAT-P; AI846286
Mus musculus	RefSeq	ILMN_219423	ILMN_219423	B3GAT1	NM_029792.1	NM_029792.1		76898	30794189	NM_029792.1	B3gat1	NP_084068.1	ILMN_2853122	007200079	S	3079	GCAGATGCTACTTCAGTTGTTTTCATGTAATGTCCTCCCTTCACTGCATG	9	+	26568576-26568625	9qA4	Mus musculus beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) (B3gat1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence TAS]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]; Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 15018] [evidence IEA]	HNK-1; mKIAA4235; KIAA4235; 0710007K08Rik; GlcAT-P; AI846286	HNK-1; mKIAA4235; KIAA4235; 0710007K08Rik; GlcAT-P; AI846286
Mus musculus	RefSeq	ILMN_219423	ILMN_219423	B3GAT1	NM_029792.1	NM_029792.1		76898	30794189	NM_029792.1	B3gat1	NP_084068.1	ILMN_1249371	002140020	S	106	CGGCCCATGCCTGTTCTTTTCTTCCTTGTGCTGCCGGCGCTCCGTGGCCA	9	+	26559252-26559301	9qA4	Mus musculus beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) (B3gat1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence TAS]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]; Catalysis of the reaction: UDP-glucuronate + 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein = UDP + 3-beta-D-glucuronosyl-3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 15018] [evidence IEA]	HNK-1; mKIAA4235; KIAA4235; 0710007K08Rik; GlcAT-P; AI846286	HNK-1; mKIAA4235; KIAA4235; 0710007K08Rik; GlcAT-P; AI846286
Mus musculus	RefSeq	ILMN_213537	ILMN_260574	AI314976	NM_207219.3	NM_207219.3		106821	142382757	NM_207219.3	AI314976	NP_997102.2	ILMN_2638036	000610725	S	594	CTGCGATTCTCGAAGAGGTGTTTGAGTCAACAGACATCAAAATTACTGTG	17	+	48556050-48556099	17qC	Mus musculus expressed sequence AI314976 (AI314976), mRNA.				AW558560	AW558560
Mus musculus	RefSeq	ILMN_223743	ILMN_223743	RAG1	NM_009019.2	NM_009019.2		19373	133778932	NM_009019.2	Rag1	NP_033045.2	ILMN_1217622	005270373	S	6483	GAGGGGAGGTTTAGACACCAGGATGCAATGTACTATTTGATTTGAGGACC	2	-	101478670-101478719	2qE2	Mus musculus recombination activating gene 1 (Rag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process by which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33151] [evidence IGI]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IDA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence TAS]; A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism [goid 16265] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rag-1	Rag-1
Mus musculus	RefSeq	ILMN_219072	ILMN_321917	LOC100046558	XM_001476273.1	XM_001476273.1		100046558	149256805	XM_001476273.1	LOC100046558	XP_001476323.1	ILMN_1237612	002810022	S	1286	GCCCTAGTGTGAGATAACCCTGGAGGAACTGAGCTAAACTGCAAATCTGG					PREDICTED: Mus musculus similar to CaBP5 (LOC100046558), mRNA.					
Mus musculus	RefSeq	ILMN_252257	ILMN_252257	G3BP2	NM_001080794.1	NM_001080794.1		23881	124248567	NM_001080794.1	G3bp2	NP_001074263.1	ILMN_3114413	001940093	A	3901	GGAGCTACGAGCCATTCAGCTTCAGCCTTTCCAGACCACACACGAGACAT	5	-	92481552-92481601	5qE2	Mus musculus GTPase activating protein (SH3 domain) binding protein 2 (G3bp2), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AA409541; KIAA0660; E430034L04Rik; mKIAA0660; G3BP	AA409541; KIAA0660; E430034L04Rik; mKIAA0660; G3BP
Mus musculus	RefSeq	ILMN_261748	ILMN_261748	CABC1	NM_023341.2	NM_023341.2		67426	70778881	NM_023341.2	Cabc1	NP_075830.2	ILMN_2800813	003800750	S	3223	GGTCTTCACAGATGCTGCCTTGGAGGCCCAGTGCGACTTGAAAGATCTGA	1	-	182096114-182096163	1qH4	Mus musculus chaperone, ABC1 activity of bc1 complex like (S. pombe) (Cabc1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI462003; 4632432J16Rik; mKIAA0451	AI462003; 4632432J16Rik; mKIAA0451
Mus musculus	RefSeq	ILMN_233680	ILMN_233680	TRPD52L3	NM_025741.1	NM_025741.1		66745	13385201	NM_025741.1	Trpd52l3	NP_080017.1	ILMN_2989947	001230187	S	2151	AGCTCTGAAGCCATTGATAAATCCCAGCCCTCCACTGAGTCCCAAAGGCC	19	+	30080430-30080479	19qC1	Mus musculus tumor protein D52-like 3 (Trpd52l3), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	4931412G03Rik	4931412G03Rik
Mus musculus	RefSeq	ILMN_212160	ILMN_212160	OLFR340	NM_146951.1	NM_146951.1		258953	22129018	NM_146951.1	Olfr340	NP_667162.1	ILMN_2623440	005260209	S	569	CAGACACTACCATCAATGAGCTTGTCATCCTTGTTTTAGGTAATATGGTC	2	+	36308675-36308724	2qB	Mus musculus olfactory receptor 340 (Olfr340), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129200; MOR136-1	MGC129200; MOR136-1
Mus musculus	RefSeq	ILMN_222327	ILMN_222327	CCDC93	NM_029955.2	NM_029955.2		70829	142371535	NM_029955.2	Ccdc93	NP_084231.1	ILMN_1252430	006400703	S	651	CCCTATTCCTGCCTTAGGAGTGCCTCCCTATGGCTTATATACCTAGGTGC	1	+	123340488-123340537	1qE2.3	Mus musculus coiled-coil domain containing 93 (Ccdc93), transcript variant 3, mRNA.				9230102M16Rik; 4633402D15Rik	9230102M16Rik; 4633402D15Rik
Mus musculus	RefSeq	ILMN_218733	ILMN_218733	SMR2	NM_021289.2	NM_021289.2		20600	72534646	NM_021289.2	Smr2	NP_067264.2	ILMN_2699540	004880403	S	392	TACGTCCAGATATTGAACCTCCAAGCAAATATATTCAACCAGTTCCCAGA	5	+	88537794-88537843	5qE1	Mus musculus submaxillary gland androgen regulated protein 2 (Smr2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IEA]		MSG2; MGC130573	MSG2; MGC130573
Mus musculus	RefSeq	ILMN_212092	ILMN_212092	SEZ6L2	NM_144926.2	NM_144926.2		233878	31981740	NM_144926.2	Sez6l2	NP_659175.1	ILMN_2811861	005560438	S	3203	CTGTATGAAGCTGGGGATACGAGGGAGTATGAAGTTTCCATCTGAGCCTC	7	+	126759390-126759404:126761201-126761230:126761231-126761235	7qF3	Mus musculus seizure related 6 homolog like 2 (Sez6l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Psk1; MGC90604; MGC19060; AI835913; BSRP-A; AW121566	Psk1; MGC90604; MGC19060; AI835913; BSRP-A; AW121566
Mus musculus	RefSeq	ILMN_212092	ILMN_212092	SEZ6L2	NM_144926.2	NM_144926.2		233878	31981740	NM_144926.2	Sez6l2	NP_659175.1	ILMN_2647218	000460373	S	3557	ACAAGAACTGTCCCCCAGCTCTGCTATCCCCATGGCCATGAAGGCTCCCT	7	+	126761540-126761589	7qF3	Mus musculus seizure related 6 homolog like 2 (Sez6l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Psk1; MGC90604; MGC19060; AI835913; BSRP-A; AW121566	Psk1; MGC90604; MGC19060; AI835913; BSRP-A; AW121566
Mus musculus	RefSeq	ILMN_216324	ILMN_216324	METTL8	NM_145524.2	NM_145524.2		228019	142381685	NM_145524.2	Mettl8	NP_663499.1	ILMN_2669774	000870372	S	2028	TCCGGGCTATTCTTAGATATGCAGATCATCTTTGAGACACTGTCTGTGCT	2	-	70802957-70803006	2qC2	Mus musculus methyltransferase like 8 (Mettl8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IDA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]	Catalysis of the addition of an acetyl group to a histone, specific for histones H3 and H4 [goid 4406] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC7995; BC004636; MGC67805; Tip5; RP23-359E23.1	MGC7995; BC004636; MGC67805; Tip5; RP23-359E23.1
Mus musculus	RefSeq	ILMN_209299	ILMN_209299	SIX6	NM_011384.4	NM_011384.4		20476	146134416	NM_011384.4	Six6	NP_035514.1	ILMN_2594461	006980471	S	3802	GCCCAGATCTTCAAACAGCAATTTACTCAATCACCCGAATCAGCCCATAA				12qC3	Mus musculus sine oculis-related homeobox 6 homolog (Drosophila) (Six6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Optx2; Six9	Optx2; Six9
Mus musculus	MEEBO	ILMN_190921	ILMN_190921	3830408C21RIK	scl070690.5_27						3830408C21Rik		ILMN_1218177	005290746	S	1	GACTACTGAGGCCAATGAGTTTGAGAAGAATGTTAATATCAAGACAACAG										
Mus musculus	RefSeq	ILMN_224032	ILMN_228276	1810006K21RIK	XM_983803.1	XM_983803.1		69038	94406499	XM_983803.1	1810006K21Rik	XP_988897.1	ILMN_2773491	003440093	S	258	GACGCCATGAGTAGGTACACCAGCCCAGTGAACCCGGCTGTCTTCCCTCA				19qA	PREDICTED: Mus musculus RIKEN cDNA 1810006K21 gene (1810006K21Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_209179	ILMN_209179	ADAM26A	NM_010085.2	NM_010085.2		13525	148539873	NM_010085.2	Adam26a	NP_034215.2	ILMN_1244723	004210382	S	537	CTTCTTATTATTCACTTATAGTGACCAAGGTGATCTCCTTGAACAACACC				8qA4	Mus musculus a disintegrin and metallopeptidase domain 26A (testase 3) (Adam26a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence ISS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Dtgn4; Adam26	Dtgn4; Adam26
Mus musculus	RefSeq	ILMN_209179	ILMN_209179	ADAM26A	NM_010085.2	NM_010085.2		13525	148539873	NM_010085.2	Adam26a	NP_034215.2	ILMN_1229860	005820711	S	2296	CCACCTCCATTGCCTTTATCTCATTCCAAATGGATTGTGTACATCCTTAT				8qA4	Mus musculus a disintegrin and metallopeptidase domain 26A (testase 3) (Adam26a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence ISS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Dtgn4; Adam26	Dtgn4; Adam26
Mus musculus	RefSeq	ILMN_223076	ILMN_223076	OLFR113	NM_146289.1	NM_146289.1		258286	22129710	NM_146289.1	Olfr113	NP_666401.1	ILMN_2759037	001980500	S	494	CTATCAGATTCTGTGGGGACAGAATAATCCACCAATTCTTCTGTGATGTC	17	-	37719348-37719397	17qB1	Mus musculus olfactory receptor 113 (Olfr113), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR218-9	MOR218-9
Mus musculus	Riken	ILMN_204930	ILMN_204930	D130070F09RIK	ri|D130070F09|PX00186K12|AK051740|1665					AK051740	D130070F09Rik		ILMN_1218524	004590743	S	1334	GCCCGGCAAGGCTGGTGGGCTTGGCATGGAGTTAGGACTTAGATTATGAC										
Mus musculus	RefSeq	ILMN_210852	ILMN_312365	A930017M01RIK	XR_035330.1	XR_035330.1		239410	149266553	XR_035330.1	A930017M01Rik		ILMN_1239505	004590360	S	3046	GTCTACCAATAGGTATAGTCGTTGTGTAAGAGCTTTCTGAGGCCTTCCTG				15qB3.3	PREDICTED: Mus musculus RIKEN cDNA A930017M01 gene (A930017M01Rik), misc RNA.					
Mus musculus	MEEBO	ILMN_185587	ILMN_185587	5730507C05RIK	scl41072.1.1_60						5730507C05Rik		ILMN_1215265	001260220	S	16	CATAATTTGATGATAGATTGATAACCCACAATACTGGAATACCACAGATT										
Mus musculus	RefSeq	ILMN_219158	ILMN_219158	DSCR3	NM_007834.2	NM_007834.2		13185	142352653	NM_007834.2	Dscr3	NP_031860.1	ILMN_2704993	004610039	S	2044	ATTTAAACAATCTAGTACCCAAAAAATGTGGGCCGTACTTTCTAGTGAGT	16	-	94720316-94720365	16qC4	Mus musculus Down syndrome critical region gene 3 (Dscr3), mRNA.	A conserved multimeric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. For example, the budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p [goid 30904] [evidence IEA]	The directed movement of substances into, out of or within a vacuole [goid 7034] [evidence IEA]		AW538125; Dcra; MGC5833	AW538125; Dcra; MGC5833
Mus musculus	RefSeq	ILMN_219158	ILMN_219158	DSCR3	NM_007834.2	NM_007834.2		13185	142352653	NM_007834.2	Dscr3	NP_031860.1	ILMN_2755258	003390156	S	424	GCGGTCCCTGTTGGCCAAGGACCTGACCAAGACCTGTGAATTCATCGTTC	16	-	94732377-94732426	16qC4	Mus musculus Down syndrome critical region gene 3 (Dscr3), mRNA.	A conserved multimeric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. For example, the budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p [goid 30904] [evidence IEA]	The directed movement of substances into, out of or within a vacuole [goid 7034] [evidence IEA]		AW538125; Dcra; MGC5833	AW538125; Dcra; MGC5833
Mus musculus	RefSeq	ILMN_184139	ILMN_258963	BC030046	XM_147850.7	XM_147850.7		277154	94397167	XM_147850.7	BC030046	XP_147850.5	ILMN_1234939	000070538	S	4188	CTACCGAACCTCTTATCGGGGCTCTCTGTTTGCTGTGACAGTGGACACTC	14	+	56490384-56490433	14qC3	PREDICTED: Mus musculus cDNA sequence BC030046 (BC030046), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193340	ILMN_193340	SCL0078462.1_70	scl0078462.1_70	AK018879.1			12858838	AK018879.1	scl0078462.1_70		ILMN_2496281	006550037	S	20	CAACTTCATGAAGATGCTCTATCTAGAAGTCTCCCTACCCTGAAGGGGAA										
Mus musculus	Riken	ILMN_205438	ILMN_205438	SEC61A	ri|E330014L21|PX00212G19|AK054318|2525					AK054318	Sec61a		ILMN_1243932	000360309	S	2208	GCCGTCCATTCTACAGTTGGACCACCCATTTGGGAGCAGTGTGGAAGCCC										
Mus musculus	RefSeq	ILMN_197638	ILMN_197638	LOC380955	XM_358471.1	XM_358471.1			38077032	XM_358471.1	LOC380955		ILMN_1259104	005550722	S	73	GGCGGCTCCCCTCTCACACAGCGGGACTGGAGGTCTGTTATCTTGATGAA										
Mus musculus	RefSeq	ILMN_239834	ILMN_239834	CYP2D40	NM_023623.2	NM_023623.2		71754	124249070	NM_023623.2	Cyp2d40	NP_076112.2	ILMN_2802643	002600612	S	699	TATCCCTAAGGGGACAACCCTCATCTGCAACCTGTCCTCCGTGCTGAAGG	15	-	82590716-82590756:82591182-82591190	15qE1	Mus musculus cytochrome P450, family 2, subfamily d, polypeptide 40 (Cyp2d40), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	P450-DB3; 1300013D18Rik; CYPIID3	P450-DB3; 1300013D18Rik; CYPIID3
Mus musculus	MEEBO	ILMN_213733	ILMN_213733	8430432M10RIK	scl066812.1_16	NM_176831.2			31341193	NM_176831.2	8430432M10Rik		ILMN_1254386	006200598	S	1364	TCAGATTTCCCACAGTCTGTACTGAGAGTAGGGGCACGAACAGGTCTGGG										
Mus musculus	RefSeq	ILMN_235805	ILMN_235805	TSPAN31	NM_025982.1	NM_025982.1		67125	13385481	NM_025982.1	Tspan31	NP_080258.1	ILMN_2964076	003520075	S	1124	GTTTTGATGGGAACACGATTATGGATGAGGGGAGGTAGGCCTCGGGCCCT	10	-	126470608-126470657	10qD3	Mus musculus tetraspanin 31 (Tspan31), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Sas; AW742554; 2700085A14Rik	Sas; AW742554; 2700085A14Rik
Mus musculus	RefSeq	ILMN_218126	ILMN_218126	SVEP1	NM_022814.2	NM_022814.2		64817	124783267	NM_022814.2	Svep1	NP_073725.2	ILMN_2691951	000630292	S	10640	AATGGAGGTGTCTGTCAACGTCCAAATGCTTGCTCATGCCCAGACGGCTG	4	-	58061005-58061054	4qB3	Mus musculus sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 (Svep1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	4833413O10Rik; Polydom; RP23-332H16.3; D430029O09Rik; 1110021D17Rik; AA387071	4833413O10Rik; Polydom; RP23-332H16.3; D430029O09Rik; 1110021D17Rik; AA387071
Mus musculus	Riken	ILMN_207276	ILMN_207276	TXN2-PENDING	ri|G630016F24|PL00013I24|AK090199|1779					AK090199	Txn2-pending		ILMN_1256179	000240079	S	1392	ACACACTCTGACCGCACCAAAGAGCATTCAGGAAAGTTGAGGGGTGGGAG										
Mus musculus	RefSeq	ILMN_197907	ILMN_231475	LOC384149	XR_003123.1	XR_003123.1		384149	94376032	XR_003123.1	LOC384149		ILMN_1260327	006770152	S	701	AGGTGGCCTGAGAGTCCAGTGACAATGGGGACAATAGGCAGGATGGGGGA				5qA1	PREDICTED: Mus musculus similar to NEDD4-binding protein 1 (N4BP1) (LOC384149), mRNA.					
Mus musculus	RefSeq	ILMN_218680	ILMN_218680	TMEM59L	NM_182991.2	NM_182991.2		67937	118130703	NM_182991.2	Tmem59l	NP_892036.1	ILMN_2698911	006770079	S	1179	ATCCCTTAGTCCCCTTGAGACAAGTGGACCTAAGTGGCCGAGAGAGGAGG	8	-	73008028-73008077	8qB3.3	Mus musculus transmembrane protein 59-like (Tmem59l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5330410G16Rik	5330410G16Rik
Mus musculus	RefSeq	ILMN_201297	ILMN_201297	LOC382390	XM_356481.1	XM_356481.1			38090631	XM_356481.1	LOC382390		ILMN_1236091	004610068	S	11	GCTCACAGCCTCGGACATCTAAAAGAAAAAAGCAAGCTGGGCTTCCACAG										
Mus musculus	RefSeq	ILMN_215322	ILMN_215322	ACSM5	NM_178758.3	NM_178758.3		272428	124249087	NM_178758.3	Acsm5	NP_848873.1	ILMN_1220520	004850739	S	2213	GACAAATCGGCACAGCCTTAGGGCATCCTTGGTCTCATTATGCCAGTGGG	7	+	126686596-126686645	7qF2	Mus musculus acyl-CoA synthetase medium-chain family member 5 (Acsm5), mRNA. XM_979651 XM_979684 XM_989322 XM_989384 XM_989414	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	C730019D22	C730019D22
Mus musculus	RefSeq	ILMN_215322	ILMN_215322	ACSM5	NM_178758.3	NM_178758.3		272428	124249087	NM_178758.3	Acsm5	NP_848873.1	ILMN_2658072	002630484	S	326	GGCAGCCAGTGCCCGAGTACTTCAACTTTGCTCATGATGTGTTGGATGTG	7	+	126672085-126672134	7qF2	Mus musculus acyl-CoA synthetase medium-chain family member 5 (Acsm5), mRNA. XM_979651 XM_979684 XM_989322 XM_989384 XM_989414	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	C730019D22	C730019D22
Mus musculus	RefSeq	ILMN_210242	ILMN_210242	SIRPB1	NM_198405.1	NM_198405.1		320832	41282034	NM_198405.1	Sirpb1	NP_940797.1	ILMN_2603636	003420044	S	1225	CTGTTAATTGCTGCCACTGTCATTTACATGCGTAAGAAGCAAAATGCCTG	3	-	15378995-15379044	3qA1	Mus musculus signal-regulatory protein beta 1 (Sirpb1), transcript variant 2, mRNA.				SIRP-beta; Sirpb; 9930027N05Rik	SIRP-beta; Sirpb; 9930027N05Rik
Mus musculus	RefSeq	ILMN_211820	ILMN_211820	DPYSL5	NM_023047.2	NM_023047.2		65254	40789287	NM_023047.2	Dpysl5	NP_075534.1	ILMN_3161282	006060609	S	4841	GAGCTGTCAGCACCCCAGCACCCAAGTGACTTCCTCACTCTGTAAATGTC	5	+	31101562-31101611	5qB1	Mus musculus dihydropyrimidinase-like 5 (Dpysl5), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IPI]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CRAM; Crmp5; CRMP-5	CRAM; Crmp5; CRMP-5
Mus musculus	RefSeq	ILMN_215443	ILMN_215443	GPR132	NM_019925.4	NM_019925.4		56696	141803482	NM_019925.4	Gpr132	NP_064309.1	ILMN_2659578	002900487	S	1681	CTGAGTGGACATAATTGTCTTCTGGAGGAGCCATGGAGCACGGTGGCCAA	12	-	114089795-114089844	12qF1	Mus musculus G protein-coupled receptor 132 (Gpr132), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISS]	G2a	G2a
Mus musculus	RefSeq	ILMN_200350	ILMN_200350	LOC386277	XM_359154.1	XM_359154.1			38081394	XM_359154.1	LOC386277		ILMN_1237488	005080689	S	1816	GAGGAAGAAGAGGCAGGAAGATTGTTAGAGCCAGAGGGTATAGAGAACGC										
Mus musculus	RefSeq	ILMN_219345	ILMN_219345	ARNTL	NM_007489.3	NM_007489.3		11865	118131159	NM_007489.3	Arntl	NP_031515.1	ILMN_2707510	006550593	S	2510	CTCCATAAAAGCCACCTCAGAGCCATTGATACAAGTCAATCTACCATGTG	7	+	120457242-120457291	7qF1	Mus musculus aryl hydrocarbon receptor nuclear translocator-like (Arntl), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IMP]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Bmal1; MOP3; bmal1b'; BMAL1b; Arnt3	Bmal1; MOP3; bmal1b'; BMAL1b; Arnt3
Mus musculus	RefSeq	ILMN_199134	ILMN_315150	LOC100042448	XM_001478614.1	XM_001478614.1		100042448	149261933	XM_001478614.1	LOC100042448	XP_001478664.1	ILMN_1245401	000990497	S	2195	CTGCAGGAACATCATGCCAAGAAAGAAGCTGCCCAGAAAGTGGGCACTGT	11	-	60387087-60387136	11qB2	PREDICTED: Mus musculus similar to Poly A binding protein, cytoplasmic 4, transcript variant 1 (LOC100042448), mRNA.					
Mus musculus	MEEBO	ILMN_190770	ILMN_190770	USH2A	scl17078.20.1_330				51705472	XM_484953	Ush2a		ILMN_2473127	005700020	S	19	CCCTAAGCCTGCACAATGAAAAAGAGACTTTGTTACATCTTCTGATGTGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; An actin-based, cross-linked cellular protrusion on the apical surface of auditory and vestibular hair cells. Stereocilium bundles act as mechanosensory organelles by responding to fluid motion or fluid pressure changes [goid 32421] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]	Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IDA]		
Mus musculus	MEEBO	ILMN_190770	ILMN_190770	USH2A	scl17078.20.1_330				51705472	XM_484953	Ush2a		ILMN_2491645	004210433	S	18	GGCCCATCAGAAGAAGAGCCCTGGATCAGATAGGGAAAGCGAATGGTTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; An actin-based, cross-linked cellular protrusion on the apical surface of auditory and vestibular hair cells. Stereocilium bundles act as mechanosensory organelles by responding to fluid motion or fluid pressure changes [goid 32421] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]	Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211002	ILMN_315139	LOC100044257	XM_001471785.1	XM_001471785.1		100044257	149257343	XM_001471785.1	LOC100044257	XP_001471835.1	ILMN_1245118	007000097	S	3362	CCTAGCATCTGCCTCGTACCTGTGGAAACTCAATAGCCATTGCAAGAGTA					PREDICTED: Mus musculus hypothetical protein LOC100044257 (LOC100044257), mRNA.					
Mus musculus	Riken	ILMN_202514	ILMN_202514	1700113I01RIK	ri|1700113I01|ZX00078O03|AK007197|854					AK007197	1700113I01Rik		ILMN_2550189	007160619	S	598	GGGAAGTAGAAGTCAGCAGCCATGAAAGTCAGACCTGATCTGGGCCTATG										
Mus musculus	RefSeq	ILMN_218034	ILMN_218034	MTF1	NM_008636.3	NM_008636.3		17764	142362528	NM_008636.3	Mtf1	NP_032662.2	ILMN_2690756	006510189	S	5239	CCTGAGTTTTGCCTGAGGCTTTGTATTATGCTGAATGTGTCCAGAGGGAC	4	+	124521783-124521832	4qD2.2	Mus musculus metal response element binding transcription factor 1 (Mtf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus [goid 46686] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Initiates or upregulates transcription in the presence of zinc [goid 42156] [evidence IDA]	Thyls; MTF-1	Thyls; MTF-1
Mus musculus	RefSeq	ILMN_215937	ILMN_215937	AFG3L1	NM_054070.2	NM_054070.2		114896	66792805	NM_054070.2	Afg3l1	NP_473411.2	ILMN_2707782	002900343	S	1670	CTACAACCCAGTGAAAAGACAACTGTAGCCTACCACGAGGCTGGGCATGC	8	+	126023915-126023964	8qE1-qE2	Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast) (Afg3l1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	1700047G05Rik; 3110061K15Rik	1700047G05Rik; 3110061K15Rik
Mus musculus	RefSeq	ILMN_215937	ILMN_215937	AFG3L1	NM_054070.2	NM_054070.2		114896	66792805	NM_054070.2	Afg3l1	NP_473411.2	ILMN_2746055	000290201	S	2154	AGAAGGTTGGCAGGCGTCTCCTGGAGAAAGAAGTGCTGGAGAAAGCCGAC	8	+	126025605-126025609:126025748-126025792	8qE1-qE2	Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast) (Afg3l1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	1700047G05Rik; 3110061K15Rik	1700047G05Rik; 3110061K15Rik
Mus musculus	RefSeq	ILMN_215937	ILMN_215937	AFG3L1	NM_054070.2	NM_054070.2		114896	66792805	NM_054070.2	Afg3l1	NP_473411.2	ILMN_1252760	001110465	S	2257	ATTTGTAGAGGGCACCGGCAGCCTAGAGGAGGACACATCCCTTCCTGAGG	8	+	126025846-126025895	8qE1-qE2	Mus musculus AFG3(ATPase family gene 3)-like 1 (yeast) (Afg3l1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	1700047G05Rik; 3110061K15Rik	1700047G05Rik; 3110061K15Rik
Mus musculus	Riken	ILMN_202814	ILMN_202814	NAP1L1	ri|6720469M23|PX00060B13|AK032896|1391					AK032896	Nap1l1		ILMN_1215717	002940689	S	1228	GAAGAAGCTGACGAGGGTTATCAGCTCTTTGAAGAAGTCAAAAGCTGCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_208709	ILMN_208709	MED18	NM_026039.2	NM_026039.2		67219	46358371	NM_026039.2	Med18	NP_080315.1	ILMN_1214075	006350079	S	147	GGAGGCGCCTCCAGTCACCATGATGCCCGTCACTGGGGGCACCATTAACA	4	-	132018800-132018849	4qD2.3	Mus musculus mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) (Med18), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		2810046C01Rik	2810046C01Rik
Mus musculus	RefSeq	ILMN_208709	ILMN_208709	MED18	NM_026039.2	NM_026039.2		67219	46358371	NM_026039.2	Med18	NP_080315.1	ILMN_1214050	001580184	S	1529	GCCATTGATATACAAGGTTTACAATGGTGGTGTGAGCCAGCATTGTGTGG	4	-	132014667-132014716	4qD2.3	Mus musculus mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) (Med18), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		2810046C01Rik	2810046C01Rik
Mus musculus	RefSeq	ILMN_208709	ILMN_208709	MED18	NM_026039.2	NM_026039.2		67219	46358371	NM_026039.2	Med18	NP_080315.1	ILMN_2826067	001580767	S	1276	GTTTTTCAATACAAGACAGGGTTTCTCTGTGTTGCTTTGGCTGCCCTGGA	4	-	132014920-132014969	4qD2.3	Mus musculus mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) (Med18), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		2810046C01Rik	2810046C01Rik
Mus musculus	MEEBO	ILMN_193509	ILMN_193509	1110018N20RIK	scl19889.5.1_15						1110018N20Rik		ILMN_2497853	001690192	S	12	GTCAGCTCCCGGATTCCCAGCCTCGGTGTTGAGACTATTTCAGAGTGAGC										
Mus musculus	RefSeq	ILMN_248474	ILMN_248474	UNC84B	NM_194342.1	NM_194342.1		223697	34996500	NM_194342.1	Unc84b	NP_919323.1	ILMN_3004864	005090445	S	3542	CTGCAAGGCAGCCCGGTTAGTGTTCGGGTGAAATGGCAAGTTGTACAGCC	15	-	79554613-79554662	15qE1	Mus musculus unc-84 homolog B (C. elegans) (Unc84b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence ISO]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IDA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence ISO]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B230369L08Rik; AI551766; C030011B15; SUN2	B230369L08Rik; AI551766; C030011B15; SUN2
Mus musculus	RefSeq	ILMN_200142	ILMN_200142	LOC385632	XM_358812.1	XM_358812.1			38080649	XM_358812.1	LOC385632		ILMN_2537734	002450673	S	694	ACTGGGGAACCGGATCATCAATGCCTTCTTCTCAGAGGGAGAGGATCAGG										
Mus musculus	RefSeq	ILMN_244701	ILMN_244701	BTNL7	NM_001081663.1	NM_001081663.1		195349	126157505	NM_001081663.1	Btnl7	NP_001075132.1	ILMN_2840034	001190136	S	939	TGCTCGAAGGAAATCAGCTTACAGGGCAGCTTGGAGGAAGGCCCAGCTGT	17	-	34678511-34678560	17qB1	Mus musculus butyrophilin-like 7 (Btnl7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm34	Gm34
Mus musculus	RefSeq	ILMN_213738	ILMN_213738	CYP2C29	NM_007815.3	NM_007815.3		13095	116268124	NM_007815.3	Cyp2c29	NP_031841.3	ILMN_2769991	004730403	S	1699	CAGTTTTCTGATTCCTTGTGTTTATGTGTATCCATTCTTGAGTAAAAATA	19	+	39405116-39405165	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 29 (Cyp2c29), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]	AHOH; Ahh-1; Cyp2c; AI159681; AI196010; Ah-2; P450-2C; AHOHase	AHOH; Ahh-1; Cyp2c; AI159681; AI196010; Ah-2; P450-2C; AHOHase
Mus musculus	RefSeq	ILMN_213738	ILMN_213738	CYP2C29	NM_007815.3	NM_007815.3		13095	116268124	NM_007815.3	Cyp2c29	NP_031841.3	ILMN_1251150	002100025	S	570	CTCAATTATTTTCCAGAATCGTTTTGATTATAAGGATAAGGAATTTCTTA	19	+	39382153-39382202	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 29 (Cyp2c29), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]	AHOH; Ahh-1; Cyp2c; AI159681; AI196010; Ah-2; P450-2C; AHOHase	AHOH; Ahh-1; Cyp2c; AI159681; AI196010; Ah-2; P450-2C; AHOHase
Mus musculus	RefSeq	ILMN_219783	ILMN_219783	NARG2	NM_145618.3	NM_145618.3		93697	46195813	NM_145618.3	Narg2	NP_663593.2	ILMN_2802952	007560097	S	3845	AAACACTTGATGATCCTATCAGACATGGTGAAGGTGCCATTAAGCCTAGG	9	+	69263425-69263474	9qC	Mus musculus NMDA receptor-regulated gene 2 (Narg2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			B230343B06Rik	B230343B06Rik
Mus musculus	RefSeq	ILMN_219783	ILMN_219783	NARG2	NM_145618.3	NM_145618.3		93697	46195813	NM_145618.3	Narg2	NP_663593.2	ILMN_1226827	004590273	S	3067	GCCTGTTCAGCAAGTTGAAAATGAAGGAGTGGCTCGGAATAAAAGGAAAA	9	+	69263637-69263686	9qC	Mus musculus NMDA receptor-regulated gene 2 (Narg2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			B230343B06Rik	B230343B06Rik
Mus musculus	RefSeq	ILMN_222895	ILMN_222895	NMB	NM_026523.2	NM_026523.2		68039	142366023	NM_026523.2	Nmb	NP_080799.1	ILMN_2756334	004730070	S	269	GTGGGGACAGCACCCCCTAACACCCCGAGGGACCAGAGACTACAGCTGAG	7	-	88049089-88049138	7qD3	Mus musculus neuromedin B (Nmb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]		3110023K12Rik	3110023K12Rik
Mus musculus	RefSeq	ILMN_187075	ILMN_245960	ZFP236	XM_484752.5	XM_484752.5		329002	149270232	XM_484752.5	Zfp236	XP_484752.5	ILMN_1259712	004490025	S	7441	TGCAATGCTGTTTTAGGAAAGTGGTTTCTAGCCTCATGTGTAACCAGGGT	18	-	82764934-82764983	18qE3	PREDICTED: Mus musculus zinc finger protein 236, transcript variant 1 (Zfp236), mRNA.					
Mus musculus	RefSeq	ILMN_198380	ILMN_245960	ZFP236	XM_484752.5	XM_484752.5		329002	149270232	XM_484752.5	Zfp236	XP_484752.5	ILMN_1226669	000380440	S	3696	CCCAAAGAAGGCCAGGAAGCCTGTCACACGAAGCTCTTCAGAAAGTCTCC	18	-	82790623-82790672	18qE3	PREDICTED: Mus musculus zinc finger protein 236, transcript variant 1 (Zfp236), mRNA.					
Mus musculus	RefSeq	ILMN_198363	ILMN_245960	ZFP236	XM_484752.5	XM_484752.5		329002	149270232	XM_484752.5	Zfp236	XP_484752.5	ILMN_1257649	003180484	S	2036	GTGGCAGCTTACGGCGACACATGGGCATACATAATGACCTCCGTCCCTAC	18	-	82808779-82808828	18qE3	PREDICTED: Mus musculus zinc finger protein 236, transcript variant 1 (Zfp236), mRNA.					
Mus musculus	RefSeq	ILMN_187075	ILMN_245960	ZFP236	XM_484752.5	XM_484752.5		329002	149270232	XM_484752.5	Zfp236	XP_484752.5	ILMN_2498787	004730086	S	7329	CCTCACCATCAAAGCTGCTTCCTTACCAACATTCCTTGACAATACAAGGT	18	-	82765046-82765095	18qE3	PREDICTED: Mus musculus zinc finger protein 236, transcript variant 1 (Zfp236), mRNA.					
Mus musculus	RefSeq	ILMN_209683	ILMN_209683	MOSC2	NM_133684.3	NM_133684.3		67247	141801777	NM_133684.3	Mosc2	NP_598445.1	ILMN_2602195	003400379	S	1189	TTTAGGAATGTGAGGCTGTATAAATTTTAGATAATGAGGTTTTTAGAAAA	1	-	186637591-186637640	1qH5	Mus musculus MOCO sulphurase C-terminal domain containing 2 (Mosc2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with molybdenum (Mo) ions [goid 30151] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	2810484M10Rik	2810484M10Rik
Mus musculus	RefSeq	ILMN_198991	ILMN_239912	LOC666363	XR_001864.1	XR_001864.1		666363	94387897	XR_001864.1	LOC666363		ILMN_1243555	006840091	S	1344	TTCAGCCACCACTCGGATGCCAAGCAAAACTGAACCCAGAGCTCAGCTGG	10	+	3828328-3828377		PREDICTED: Mus musculus similar to mouse RING finger 1 (LOC666363), mRNA.					
Mus musculus	MEEBO	ILMN_189815	ILMN_189815	NRG3	scl45689.9_691				6679127	NM_008734	Nrg3		ILMN_2750172	006180164	S	2336	CTTTCTCCCCCTGAGTCCCACGGCCAAATCAGAACGAGAGGCACAATTTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_189815	ILMN_189815	NRG3	scl45689.9_691				6679127	NM_008734	Nrg3		ILMN_2464600	003850681	S	2	CATGGGGCATTCAAGGAAACTAGTGTTCACATACCCAGTCTTTATCCAAT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_213392	ILMN_213392	SRCASM	scl39720.14_667	XM_126629.2			28514072	XM_126629.2	Srcasm		ILMN_1243012	001450471	S	4206	GGACCATAATACCTAACCCAATGTACTGGGAATATTGCAACAAGCCTTCC										
Mus musculus	RefSeq	ILMN_199445	ILMN_199445	LOC382560	XM_356570.1	XM_356570.1			38049301	XM_356570.1	LOC382560		ILMN_1249300	005360243	S	268	CCTTTCACCAAGAAGGCAGGAGAGCTTAAATCAAAACAGGGCGCAGTGCC										
Mus musculus	Riken	ILMN_206904	ILMN_206904	F830018F06RIK	ri|F830018F06|PL00005L04|AK089774|1176					AK089774	F830018F06Rik		ILMN_1256975	004900524	S	1052	GGAGGTGGTGTTGGAAGAGGTGTGCCCTCATTGGCACAAATGTTACTGGG										
Mus musculus	RefSeq	ILMN_220606	ILMN_220606	CIRH1A	NM_011574.1	NM_011574.1		21771	31982958	NM_011574.1	Cirh1a	NP_035704.1	ILMN_2724322	004040343	S	1548	AAGGACACTTGTGGCAGTAGAGCGACCCCTGGACGACATCATTGCTCAAC	8	+	109446794-109446843	8qD3	Mus musculus cirrhosis, autosomal recessive 1A (human) (Cirh1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TEG-292; Tex292	TEG-292; Tex292
Mus musculus	RefSeq	ILMN_200775	ILMN_200775	LOC384569	XM_357715.1	XM_357715.1			38086000	XM_357715.1	LOC384569		ILMN_2539961	002350767	S	688	CTCAACACGTTGGCCAGCTACGGCTACAACACCAACTCGCTCAGCCTGGG										
Mus musculus	RefSeq	ILMN_189314	ILMN_189314	TXNDC8	NM_026132.2	NM_026132.2		67402	142365363	NM_026132.2	Txndc8	NP_080408.2	ILMN_2460188	000780753	S	544	CCCTGCGAGCTGTTCTCTATTGGTCTCTCCTGACGCTCTGTCGGAAGAAC	4	-	57996925-57996974	4qB3	Mus musculus thioredoxin domain containing 8 (Txndc8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		MGC151142; 4930429J24Rik; Trx6; MGC151140; Sptrx3; Sptrx-3	MGC151142; 4930429J24Rik; Trx6; MGC151140; Sptrx3; Sptrx-3
Mus musculus	RefSeq	ILMN_217794	ILMN_217794	SEC16A	NM_153125.2	NM_153125.2		227648	124378049	NM_153125.2	Sec16a	NP_694765.2	ILMN_1225772	000870161	S	8483	GGCTTCCAGGACGTTCCATAGATGAGTGTACTTGGACCCTCCTGTTCCTG	2	-	26265157-26265206	2qA3	Mus musculus SEC16 homolog A (S. cerevisiae) (Sec16a), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]		Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [evidence ISA]	MGC38812; AU024582; C230052J16Rik	MGC38812; AU024582; C230052J16Rik
Mus musculus	Riken	ILMN_201775	ILMN_201775	2010007K12RIK	ri|2010007K12|ZX00053B01|AK008150|1201					AK008150	2010007K12Rik		ILMN_1220626	003800739	S	899	TCGCAGACAGCCCTCCAAGTTATGAACCATCTCCACTTACATAAGTCCTC										
Mus musculus	RefSeq	ILMN_220162	ILMN_220162	OGN	NM_008760.4	NM_008760.4		18295	145966716	NM_008760.4	Ogn	NP_032786.1	ILMN_2740622	000450537	S	1841	CTGTATATGTTCACCCAAACAAACTAAATATGCTCATTCCAGCCCAAGAG				13qA5	Mus musculus osteoglycin (Ogn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	OG; SLRR3A; mimecan; 3110079A16Rik; mimican; OIF	OG; SLRR3A; mimecan; 3110079A16Rik; mimican; OIF
Mus musculus	RefSeq	ILMN_194357	ILMN_194357	UBE2C	NM_026785.2	NM_026785.2		68612	142350135	NM_026785.2	Ube2c	NP_081061.1	ILMN_1229321	002490035	S	632	TTCTTAGACTATCTGTCCTTTCTCCTTGATTTCTAAACTATGTTATTTTT	2	+	164598103-164598152	2qH3	Mus musculus ubiquitin-conjugating enzyme E2C (Ube2c), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	D2Ertd695e; 1110015A16Rik	D2Ertd695e; 1110015A16Rik
Mus musculus	Riken	ILMN_205207	ILMN_205207	SLC19A1	ri|D030009C17|PX00179O15|AK050714|2851					AK050714	Slc19a1		ILMN_1233018	004780243	S	2510	GGTGTTAAGTCTGGTGGGCCAGTGAGGAGGCAGGTGGAGAAGGTGTTTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Catalysis of the transfer of reduced folate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8518] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212769	ILMN_212769	LRRN3	NM_010733.2	NM_010733.2		16981	46402513	NM_010733.2	Lrrn3	NP_034863.1	ILMN_2630078	004590619	S	2785	CTCCTGACCAAGGGAGAGGTGAAAGTTCGGCATTTTAATTGACTGGCTTC	12	-	42178605-42178654	12qB1	Mus musculus leucine rich repeat protein 3, neuronal (Lrrn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NLRR-3	NLRR-3
Mus musculus	MEEBO	ILMN_188279	ILMN_188279	AW011738	scl24594.3_72				51709745	XM_489070	AW011738		ILMN_1248890	002760661	S	4	GACCACATATATGAGGGCTTTATCTCCTGGACCATTGCACTACTAAACGG										
Mus musculus	RefSeq	ILMN_232655	ILMN_232655	BRDT	NM_001079873.1	NM_001079873.1		114642	120431732	NM_001079873.1	Brdt	NP_001073342.1	ILMN_3127006	005290332	A	1171	GCCGTATGCATGGCCCTTCTATAATCCTGTGGATGCTGATGCTTTGGGAC	5	+	107779343-107779392	5qE5	Mus musculus bromodomain, testis-specific (Brdt), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IDA]	7420412D09Rik; Fsrg3; Brd6	7420412D09Rik; Fsrg3; Brd6
Mus musculus	RefSeq	ILMN_190541	ILMN_190541	WDR4	NM_021322.1	NM_021322.1		57773	10946627	NM_021322.1	Wdr4	NP_067297.1	ILMN_2508208	003310242	S	646	TGAGACTCTGGGAGTACAGAAGCGGTAGGCAGCTGCAGTGCTGTGACCTG	17	-	31637597-31637646	17qB1	Mus musculus WD repeat domain 4 (Wdr4), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]		D530049K22Rik; AI415180; AI448349	D530049K22Rik; AI415180; AI448349
Mus musculus	RefSeq	ILMN_190541	ILMN_190541	WDR4	NM_021322.1	NM_021322.1		57773	10946627	NM_021322.1	Wdr4	NP_067297.1	ILMN_2471045	004890056	S	350	GGACCGAGTCTTGGTGGCTGACAAGTCTGGAGACGTCTACTCCTTTTCGG	17	-	31640516-31640565	17qB1	Mus musculus WD repeat domain 4 (Wdr4), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]		D530049K22Rik; AI415180; AI448349	D530049K22Rik; AI415180; AI448349
Mus musculus	RefSeq	ILMN_190541	ILMN_190541	WDR4	NM_021322.1	NM_021322.1		57773	10946627	NM_021322.1	Wdr4	NP_067297.1	ILMN_2499970	001030196	S	2255	GCAGCTATCAGTCGAATGGGTGGTGTTCACGGAGCAGGGTGCTCACCTCT	17	-	31632622-31632671	17qB1	Mus musculus WD repeat domain 4 (Wdr4), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]		D530049K22Rik; AI415180; AI448349	D530049K22Rik; AI415180; AI448349
Mus musculus	RefSeq	ILMN_190541	ILMN_190541	WDR4	NM_021322.1	NM_021322.1		57773	10946627	NM_021322.1	Wdr4	NP_067297.1	ILMN_1212966	001340121	S	1811	GAAGGAAATGAACAGAAATCACAGCATCAATAAAGACAAACTTTGCATAG	17	-	31633066-31633115	17qB1	Mus musculus WD repeat domain 4 (Wdr4), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]		D530049K22Rik; AI415180; AI448349	D530049K22Rik; AI415180; AI448349
Mus musculus	RefSeq	ILMN_210137	ILMN_210137	ZC3HC1	NM_172735.1	NM_172735.1		232679	27370071	NM_172735.1	Zc3hc1	NP_766323.1	ILMN_2864798	002710754	S	1528	TCCGGCAGTGGGAGTCTTCATCCTCATCGTGAAGATGCTCCGGACAGAAC	6	-	30316667-30316716	6qA3.3	Mus musculus zinc finger, C3HC type 1 (Zc3hc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110054L24Rik; Nipa; HSPC216; AU019789; AU018540	1110054L24Rik; Nipa; HSPC216; AU019789; AU018540
Mus musculus	RefSeq	ILMN_209262	ILMN_209262	KRTAP8-2	NM_010676.2	NM_010676.2		16704	113722126	NM_010676.2	Krtap8-2	NP_034806.2	ILMN_2594119	004590577	S	230	GGAGCCAGCATCTTAAATATGAAAACATTACCCCTAACTCATACTAGGAC	16	-	88896415-88896464	16qC3.3	Mus musculus keratin associated protein 8-2 (Krtap8-2), mRNA.					
Mus musculus	RefSeq	ILMN_199117	ILMN_313296	LOC100041242	XM_001476031.1	XM_001476031.1		100041242	149261598	XM_001476031.1	LOC100041242	XP_001476081.1	ILMN_1258786	007210044	S	318	TGGCATCCAGGGAGCAACAAGGGAAGCAGGTGATGTTGTGTGGCCCAGGG	11	-	6131097-6131146	11qA1	PREDICTED: Mus musculus hypothetical protein LOC100041242 (LOC100041242), mRNA.					
Mus musculus	RefSeq	ILMN_186620	ILMN_254330	UPK1A	NM_026815.2	NM_026815.2		109637	142373524	NM_026815.2	Upk1a	NP_081091.1	ILMN_1240084	002970164	S	944	CCCTTCTTGTGATCCCAACATCCCTTTCTAGATGTAGGAGCTGCCTCGGG	7	-	31388425-31388474	7qB1	Mus musculus uroplakin 1A (Upk1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Interacting selectively with any monosaccharide. Monosaccharides are the simplest carbohydrates; they are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H[CHOH]nC(=O)[CHOH]mH with three or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides [goid 48029] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Upk1; Tspan21; C87192; AU019298; 1110031P12Rik	Upk1; Tspan21; C87192; AU019298; 1110031P12Rik
Mus musculus	RefSeq	ILMN_220473	ILMN_220473	D1PAS1	NM_033077.2	NM_033077.2		110957	31542466	NM_033077.2	D1Pas1	NP_149068.1	ILMN_2874631	001030541	S	2900	GGTACTCTAAGGAAGGCAGGGGTGAAGCCCAGGATGAAGGATGGCATTTG	1	+	188794194-188794243	1qH5	Mus musculus DNA segment, Chr 1, Pasteur Institute 1 (D1Pas1), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	Pl10; AU016353	Pl10; AU016353
Mus musculus	RefSeq	ILMN_220089	ILMN_220089	IL15RA	NM_008358.1	NM_008358.1		16169	6680408	NM_008358.1	Il15ra	NP_032384.1	ILMN_1236536	006400270	S	2	TGGCCTCGCCGCAGCTCCGGGGCTATGGAGTCCAGGCCATTCCTGTGTTG	2	+	11627476-11627525	2qA1	Mus musculus interleukin 15 receptor, alpha chain (Il15ra), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA690181	AA690181
Mus musculus	RefSeq	ILMN_200057	ILMN_200057	LOC386451	XM_359272.1	XM_359272.1			38080087	XM_359272.1	LOC386451		ILMN_1232556	005690564	S	302	TAAGGATGCGGCGAGCCACACGGACACTGTCTCTAGCTCAAGGAAACCAT										
Mus musculus	RefSeq	ILMN_209137	ILMN_209137	OLFR42	NM_010984.1	NM_010984.1		18341	46559421	NM_010984.1	Olfr42	NP_035114.1	ILMN_2592893	001230280	S	779	TACAACCCGGTAACAGGGCCTCTAAGGACCAGGGCAAGTTCCTCACCCTC	13	+	21225424-21225473	13qA3.1	Mus musculus olfactory receptor 42 (Olfr42), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-31; MGC151295; IA3; MOR256-61	MOR256-31; MGC151295; IA3; MOR256-61
Mus musculus	RefSeq	ILMN_223299	ILMN_223299	GPATCH1	NM_026181.1	NM_026181.1		67471	13385691	NM_026181.1	Gpatch1	NP_080457.1	ILMN_2926257	000060070	S	2778	GCTGCTGAGAAGACTGAAGTGTCTCCCCCTAAGAAGGCAATAATGGAGCC	7	-	36061792-36061799:36061800-36061830:36066351-36066361	7qB1	Mus musculus G patch domain containing 1 (Gpatch1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Gpatc1; ECGP; 1300003A17Rik	Gpatc1; ECGP; 1300003A17Rik
Mus musculus	RefSeq	ILMN_223299	ILMN_223299	GPATCH1	NM_026181.1	NM_026181.1		67471	13385691	NM_026181.1	Gpatch1	NP_080457.1	ILMN_2762189	007050725	S	2328	TTCGGAGGAGGAGCAAGATGATAGTGAGGACAGTCAAGAGCACACTGAGG	7	-	36072198-36072247	7qB1	Mus musculus G patch domain containing 1 (Gpatch1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Gpatc1; ECGP; 1300003A17Rik	Gpatc1; ECGP; 1300003A17Rik
Mus musculus	Riken	ILMN_203259	ILMN_203259	1810047K05RIK	ri|6430403F18|PX00103M13|AK032155|1358					AK032155	1810047K05Rik		ILMN_2555935	004220097	S	1305	CCCCTTTTCGTGTGATGTGTTACTGTGGGAGACAATACAGCTGCTCTATG										
Mus musculus	RefSeq	ILMN_230837	ILMN_230837	KRR1	NM_178610.2	NM_178610.2		52705	31340821	NM_178610.2	Krr1	NP_848725.1	ILMN_2938019	002350341	S	3391	AACCCATTGCATATGTGATAACCTTCCACCCATACACTGCCTATCCTAGA	10	+	111391030-111391079	10qD2	Mus musculus KRR1, small subunit (SSU) processome component, homolog (yeast) (Krr1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AI255219; 2610511F02Rik; D10Ertd773e; AI428520; Hrb2	AI255219; 2610511F02Rik; D10Ertd773e; AI428520; Hrb2
Mus musculus	MEEBO	ILMN_209617	ILMN_209617	APP	scl0011820.2_119	NM_007471.1			6680707	NM_007471.1	App		ILMN_2597532	005860075	S	2246	GCGGCCTCTGAACTTGGACAGCGAAACCATTGCTTCACTACCCATCGGTG						A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]; The area in the center of the spindle where the spindle microtubules from opposite poles overlap [goid 51233] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The growth of a synapse at a neuromuscular junction, the site of apposition of a motor end plate and the subneural cleft of the skeletal muscle fiber that it innervates [goid 51124] [evidence IGI]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; The process by which outgrowths develop from the axons of intact undamaged neurons [goid 48669] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings [goid 51563] [evidence IGI]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The recognition of molecules at the central nervous system midline choice point by an axon growth cone; this choice point determines whether the growth cone will cross the midline [goid 16199] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IDA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IMP]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IGI]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IGI]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence IMP]; The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IGI]; Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50803] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor, followed by the movement of ions through a channel in the receptor complex [goid 35235] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IGI]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_244096	ILMN_244096	F430201B04RIK	NM_001039038.1	NM_001039038.1		621239	85702335	NM_001039038.1	F430201B04Rik	NP_001034127.1	ILMN_2902336	005670767	S	1726	CTTAGGTGGGGTGCTGGGACGGTTCTGGGTAGCACAGGTTCTTTCATACC	17	-	25670198-25670247	17qA3.3	Mus musculus RIKEN cDNA F430201B04 gene (F430201B04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187656	ILMN_187656	TRIM35	NM_029979.3	NM_029979.3		66854	133506655	NM_029979.3	Trim35	NP_084255.2	ILMN_2469541	006060114	S	3077	CCCCACAACTGACATGTTTCTTTCAGAGCTTTTGTAAACACAAATTCCTA	14	+	66929654-66929703	14qD1	Mus musculus tripartite motif-containing 35 (Trim35), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HLS5; AW046487; Mair; mKIAA1098; 0710005M05Rik; NC8; A430106H13Rik	HLS5; AW046487; Mair; mKIAA1098; 0710005M05Rik; NC8; A430106H13Rik
Mus musculus	RefSeq	ILMN_219056	ILMN_318863	1810019J16RIK	NM_001083916.1	NM_001083916.1		69073	144922628	NM_001083916.1	1810019J16Rik	NP_001077385.1	ILMN_2703678	007200201	S	1361	CAGGTGTACTGCTAACCCCTACTGGCCCAGCAGTCACGGCCTCTCCTGGA	4	+	133086270-133086284:133086285-133086319	4qD2.3	Mus musculus RIKEN cDNA 1810019J16 gene (1810019J16Rik), transcript variant 1, mRNA.				RP23-137L22.4	RP23-137L22.4
Mus musculus	Riken	ILMN_202657	ILMN_202657	C030018L16RIK	ri|6720484E09|PX00060I13|AK020174|963					AK020174	C030018L16Rik		ILMN_1234688	004120241	S	303	TCCTACATGGAATCGGCTGGGTTCCGGGCTAGCTCCAGTTCTCTTTGCGG										
Mus musculus	RefSeq	ILMN_219536	ILMN_219536	1110031B06RIK	NM_144521.2	NM_144521.2		67826	118130016	NM_144521.2	1110031B06Rik	NP_653104.1	ILMN_2710151	006110301	S	1124	TGCAGAAGAACTTGCCACTGTTCTCTGAGGGGGAAGCCCAGGAGCTGACA	11	-	59235029-59235078	11qB1.3	Mus musculus RIKEN cDNA 1110031B06 gene (1110031B06Rik), mRNA.				RP23-378H5.4	RP23-378H5.4
Mus musculus	RefSeq	ILMN_238721	ILMN_238721	CPS1	NM_001080809.1	NM_001080809.1		227231	124248511	NM_001080809.1	Cps1	NP_001074278.1	ILMN_2913078	000070112	S	4321	GTGGCTTGGCCATCTCAGGAAGGACAGAATCCCAGCCTCTCTTCCATCAG	1	+	67274870-67274919	1qC3	Mus musculus carbamoyl-phosphate synthetase 1 (Cps1), nuclear gene encoding mitochondrial protein, mRNA. XM_993466	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a reaction that results in the formation of carbamoyl phosphate [goid 4086] [evidence IEA]; Catalysis of the reaction: 2 ATP + NH3 + CO2 + H2O = 2 ADP + phosphate + carbamoyl phosphate [goid 4087] [evidence IEA]	D1Ucla3; 4732433M03Rik; CPS	D1Ucla3; 4732433M03Rik; CPS
Mus musculus	RefSeq	ILMN_196403	ILMN_238721	CPS1	NM_001080809.1	NM_001080809.1		227231	124248511	NM_001080809.1	Cps1	NP_001074278.1	ILMN_1252849	007650176	S	4540	CGCACTGTGGACTCCAAGAGTCTGTTCCACTACAGGCAGTACAGTGCTGG	1	+	67276858-67276907	1qC3	Mus musculus carbamoyl-phosphate synthetase 1 (Cps1), nuclear gene encoding mitochondrial protein, mRNA. XM_993466	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a reaction that results in the formation of carbamoyl phosphate [goid 4086] [evidence IEA]; Catalysis of the reaction: 2 ATP + NH3 + CO2 + H2O = 2 ADP + phosphate + carbamoyl phosphate [goid 4087] [evidence IEA]	D1Ucla3; 4732433M03Rik; CPS	D1Ucla3; 4732433M03Rik; CPS
Mus musculus	MEEBO	ILMN_223750	ILMN_223750	1700090G07RIK	scl50408.6.1_2	XM_355035.1			38082932	XM_355035.1	1700090G07Rik		ILMN_2768593	002750634	S	611	CTACGTTGCCAAGGAGACGGTCTTCTTTCTCTTCTCCAAGCACTACCTGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]				
Mus musculus	RefSeq	ILMN_215162	ILMN_215162	EMX2	NM_010132.2	NM_010132.2		13797	119964699	NM_010132.2	Emx2	NP_034262.2	ILMN_1237798	007040411	S	2538	ACTTCCAAGAAGTATGTCAATGTCAATATTTTGTCAATAAAGATTTATCA	19	+	59539787-59539836	19qD3	Mus musculus empty spiracles homolog 2 (Drosophila) (Emx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The creation of greater cell numbers in the forebrain due to cell division of progenitor cells [goid 21846] [evidence IMP]; The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus [goid 21542] [evidence IMP]; The orderly movement of cells from one site to another at least one of which is located in the forebrain [goid 21885] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Pdo	Pdo
Mus musculus	RefSeq	ILMN_212029	ILMN_212029	CLCN7	NM_011930.3	NM_011930.3		26373	141802324	NM_011930.3	Clcn7	NP_036060.1	ILMN_2621921	006200433	S	3594	CAGATGGCACTTTAAACAGTAGTTGCTGTCTGTGTCGGGCAGTGGTGCAG	17	+	25298575-25298624	17qA3.3	Mus musculus chloride channel 7 (Clcn7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]	AA409691; AW538136; D17Wsu51e; ClC-7	AA409691; AW538136; D17Wsu51e; ClC-7
Mus musculus	RefSeq	ILMN_219249	ILMN_219249	EHD3	NM_020578.2	NM_020578.2		57440	141802831	NM_020578.2	Ehd3	NP_065603.1	ILMN_1232989	000010753	S	3246	CTCCCGTTCATTAGCCTAAAGCATCCCAGCTCAAATTCAGCCCCAGGCTT	17	+	74181052-74181101	17qE2	Mus musculus EH-domain containing 3 (Ehd3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ehd2	Ehd2
Mus musculus	RefSeq	ILMN_212138	ILMN_212138	SLC26A9	NM_177243.4	NM_177243.4		320718	154090972	NM_177243.4	Slc26a9	NP_796217.2	ILMN_2636728	003130228	S	1544	GCCCTACGGTGTCGCAGTGGGTGTAGCCTTCTCCATCCTGGTTGTGATCT				1qE4	Mus musculus solute carrier family 26, member 9 (Slc26a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IDA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IDA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion A(out) + anion B(in) = anion A(in) + anion B(out) [goid 15301] [evidence IDA]; Catalysis of the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3- [goid 15106] [evidence IDA]	E030002L01Rik	E030002L01Rik
Mus musculus	RefSeq	ILMN_212138	ILMN_212138	SLC26A9	NM_177243.4	NM_177243.4		320718	154090972	NM_177243.4	Slc26a9	NP_796217.2	ILMN_2623155	002450037	S	2543	GATACACTCGGGATTGCAGGAGTGACTGAGAGAAGAGTATGTCTGCCAAG				1qE4	Mus musculus solute carrier family 26, member 9 (Slc26a9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IDA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IDA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion A(out) + anion B(in) = anion A(in) + anion B(out) [goid 15301] [evidence IDA]; Catalysis of the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3- [goid 15106] [evidence IDA]	E030002L01Rik	E030002L01Rik
Mus musculus	RefSeq	ILMN_190763	ILMN_313029	LOC100047419	XM_001478110.1	XM_001478110.1		100047419	149259288	XM_001478110.1	LOC100047419	XP_001478160.1	ILMN_2473066	006020743	S	1163	CTGAGCAGCATACTTCATGTAGGGCATAGCTCACCTTTGAACCGGGCCAT					PREDICTED: Mus musculus similar to c-Maf long form (LOC100047419), mRNA.					
Mus musculus	RefSeq	ILMN_209725	ILMN_209725	SMARCC2	NM_198160.1	NM_198160.1		68094	37718971	NM_198160.1	Smarcc2	NP_937803.1	ILMN_2598571	002190019	S	4261	AGTTCCCCAAATGAGGACAAAGATTTGGGAGCAGTGCAGCGTGCCTCTGC	10	+	127918736-127918785	10qD3	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 (Smarcc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	5930405J04Rik	5930405J04Rik
Mus musculus	MEEBO	ILMN_210578	ILMN_210578	A830008O07	scl47112.9.1_305	NM_177819.2			31342940	NM_177819.2	A830008O07		ILMN_2607048	003130553	S	1613	TTACTCTTAACATTTTATCCTTGGATTTTAGGCTTTAGCTAGGGGGTGGA										
Mus musculus	Riken	ILMN_205751	ILMN_205751	CD4	ri|A430065A10|PX00137F11|AK040115|1649					AK040115	Cd4		ILMN_1217214	007150400	S	1440	ACAGAGGTTGGAGATAGAAGTGAGGAGAGAGAGGGGTCCTGGGCTCTAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which T cells that express T cell receptors that are restricted by self MHC protein complexes and tolerant to self antigens are selected for further maturation [goid 45058] [evidence ISS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_203188	ILMN_203188	JUNB	ri|A930003K15|PX00065O05|AK044253|3095					AK044253	Junb		ILMN_1254833	001340187	S	2971	ATACACCAGCATGGCCAGTTTTATGCTGTCCTGGGGACTGAACTCAGGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_257179	ILMN_257179	PRKCZ	NM_001039079.1	NM_001039079.1		18762	84872204	NM_001039079.1	Prkcz	NP_001034168.1	ILMN_3158919	005720575	A	4030	TCGCCCTCCACGGCCAAGGTCGTTCTTACTCTTGCACATCCATTAAAGAC	4	-	154634241-154634290	4qE2	Mus musculus protein kinase C, zeta (Prkcz), transcript variant 2, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 4700] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	zetaPKC; C80388; AI098070; Pkcz; R74924	zetaPKC; C80388; AI098070; Pkcz; R74924
Mus musculus	RefSeq	ILMN_257179	ILMN_257179	PRKCZ	NM_001039079.1	NM_001039079.1		18762	84872204	NM_001039079.1	Prkcz	NP_001034168.1	ILMN_3079645	000670184	I	248	GGAAGATGCCTCCTTGCACGCCCACCTTCGGTAGAGCATAAAGAATCCTG	4	-	154719584-154719633	4qE2	Mus musculus protein kinase C, zeta (Prkcz), transcript variant 2, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 4700] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	zetaPKC; C80388; AI098070; Pkcz; R74924	zetaPKC; C80388; AI098070; Pkcz; R74924
Mus musculus	RefSeq	ILMN_218620	ILMN_218620	CRYBA4	NM_021351.1	NM_021351.1		12959	10946671	NM_021351.1	Cryba4	NP_067326.1	ILMN_1258732	007050255	S	644	AAACGACTGGGTGACTGGCCGGAGGATGTGGCTGCTCTTGGTTCTGGCTA	5	-	112675611-112675660	5qF	Mus musculus crystallin, beta A4 (Cryba4), mRNA.			The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196931	ILMN_196931	LOC277856	XM_204210.2	XM_204210.2			38049697	XM_204210.2	LOC277856		ILMN_2526297	003180204	S	777	GGCGCGCGATGAAGGGAGCAAGGCTTTTTTCAAGGGCACATGGTTCAACG										
Mus musculus	RefSeq	ILMN_213298	ILMN_213298	PTHR1	NM_011199.1	NM_011199.1		19228	6755221	NM_011199.1	Pthr1	NP_035329.1	ILMN_2850309	000990327	S	1499	ACACGAGTGTGACCAATGTGGGCCCCCGTGCAGGACTCAGCCTTCCCCTT	9	-	110624980-110625029	9qF2	Mus musculus parathyroid hormone receptor 1 (Pthr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with parathyroid hormone to initiate a change in cell activity [goid 4991] [evidence TAS]; Combining with parathyroid hormone to initiate a change in cell activity [goid 4991] [evidence IMP]	PTH1R; PPR; Pthr	PTH1R; PPR; Pthr
Mus musculus	RefSeq	ILMN_196890	ILMN_196890	LOC211591	XM_147649.1	XM_147649.1			20847334	XM_147649.1	LOC211591		ILMN_2526156	002690754	S	39	ATCCTCTTATCCCATGGACAGATTCTGTGAAGATCAGCAGCTATGTCTCC										
Mus musculus	RefSeq	ILMN_209285	ILMN_209285	NEDD4	NM_010890.3	NM_010890.3		17999	56699422	NM_010890.3	Nedd4	NP_035020.2	ILMN_2725991	001850592	S	802	AGAGTTAAAGGTTATCTGAGATTAAAAATGACTTATTTACCTAAAAATGG	9	+	72559984-72560033	9qD	Mus musculus neural precursor cell expressed, developmentally down-regulated 4 (Nedd4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IPI]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	AU019897; E430025J12Rik; Nedd4a; Nedd4-1; AL023035; mKIAA0093; AA959633	AU019897; E430025J12Rik; Nedd4a; Nedd4-1; AL023035; mKIAA0093; AA959633
Mus musculus	RefSeq	ILMN_209285	ILMN_209285	NEDD4	NM_010890.3	NM_010890.3		17999	56699422	NM_010890.3	Nedd4	NP_035020.2	ILMN_2594344	002760386	S	5000	GATGATTCAGTGACATCACAGAACCTGGTGTCCCCCTCCCTACCCCAGGT	9	+	72597161-72597210	9qD	Mus musculus neural precursor cell expressed, developmentally down-regulated 4 (Nedd4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IPI]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	AU019897; E430025J12Rik; Nedd4a; Nedd4-1; AL023035; mKIAA0093; AA959633	AU019897; E430025J12Rik; Nedd4a; Nedd4-1; AL023035; mKIAA0093; AA959633
Mus musculus	RefSeq	ILMN_223087	ILMN_223087	SPTLC3	NM_175467.3	NM_175467.3		228677	146198847	NM_175467.3	Sptlc3	NP_780676.1	ILMN_1247080	000060072	S	1983	CCCCTTCTGAGGACAATTTCATTTTCCAAACAGGCTTAATTGGAAAAGGG				2qF3	Mus musculus serine palmitoyltransferase, long chain base subunit 3 (Sptlc3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + L-serine = CoA + 3-dehydro-D-sphinganine + CO2 [goid 4758] [evidence IEA]	RP23-347C2.1; C130053K05Rik	RP23-347C2.1; C130053K05Rik
Mus musculus	Riken	ILMN_206961	ILMN_206961	PCSK5	ri|E030046G19|PX00207E07|AK087337|2963					AK087337	Pcsk5		ILMN_1227047	006350020	S	2838	TCCAGAACCCACACAGCAGCTTACAACCATCTATACCAGGGGGTCCAGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract [goid 30323] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [evidence IDA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IDA]; The chemical reactions and pathways resulting in the formation of cytokines, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 42089] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; Any process involved in the assembly, maturation, egress, and release of progeny virions [goid 19067] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190454	ILMN_190454	V1RC30	NM_134185.1	NM_134185.1		171203	21717698	NM_134185.1	V1rc30	NP_598946.1	ILMN_1234237	000780754	S	289	CTGAGTGTGTTCCAGGCTGTCACTATCAGTCCCAATACCTCTTTGATGGC	6	+	57021224-57021273	6qB3	Mus musculus vomeronasal 1 receptor, C30 (V1rc30), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_190454	ILMN_190454	V1RC30	NM_134185.1	NM_134185.1		171203	21717698	NM_134185.1	V1rc30	NP_598946.1	ILMN_1213355	006100246	S	764	GGATGTATGACCCACTCATCCTGACTGTTCAGAAGTTTATGATGAATGCC	6	+	57021699-57021748	6qB3	Mus musculus vomeronasal 1 receptor, C30 (V1rc30), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_233395	ILMN_233395	EG545861	NM_001034902.2	NM_001034902.2		545861	133778970	NM_001034902.2	EG545861	NP_001030074.2	ILMN_3162020	001070504	S	4420	CCTTCCAAGTTCATCTGCTTACACATGTGTCCTTGAGAGACTGTCCAAGC	6	-	85061583-85061632	6qC3	Mus musculus predicted gene, EG545861 (EG545861), mRNA.					
Mus musculus	RefSeq	ILMN_214565	ILMN_214565	AI661453	NM_145489.1	NM_145489.1		224833	21703963	NM_145489.1	AI661453	NP_663464.1	ILMN_2830520	000290279	S	1207	CCTGGTTTAAGGGATTGGGCCCAAGGAACATGGAGATGGGTCTTGGAAGG	17	+	47606914-47606963	17qC	Mus musculus expressed sequence AI661453 (AI661453), mRNA.					
Mus musculus	RefSeq	ILMN_214565	ILMN_214565	AI661453	NM_145489.1	NM_145489.1		224833	21703963	NM_145489.1	AI661453	NP_663464.1	ILMN_2649325	006100450	S	363	CAGCCACGCTGAAAGCCCGGCCACGAGTCCGGCCCCTGTTGACTTTCATT	17	+	47583565-47583614	17qC	Mus musculus expressed sequence AI661453 (AI661453), mRNA.					
Mus musculus	RefSeq	ILMN_217933	ILMN_217933	IDI2	NM_177197.4	NM_177197.4		320581	149363647	NM_177197.4	Idi2	NP_796171.1	ILMN_1216803	002230356	S	2004	CTACCATCTCTCCTGCATCGGGGTCAACACTTGGACTTCGGGACAGTTCC				13qA1	Mus musculus isopentenyl-diphosphate delta isomerase 2 (Idi2), mRNA.			Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the isomerization of isopentenyl diphosphate into dimethylallyl diphosphate [goid 4452] [evidence IEA]	IPPI2; 4833405L16Rik	IPPI2; 4833405L16Rik
Mus musculus	Riken	ILMN_201736	ILMN_201736	DLM1-PENDING	ri|2010010H03|ZX00043N04|AK008179|726					AK008179	Dlm1-pending		ILMN_1218547	004810184	S	552	GTCTTGCCATGTAGCCCTGGATGTCCTAGAACTCACCATGTAGACCAAGC										
Mus musculus	RefSeq	ILMN_186642	ILMN_260908	9530091C08RIK	NM_177159.3	NM_177159.3		320440	141801720	NM_177159.3	9530091C08Rik	NP_796133.1	ILMN_2437257	002120095	S	2427	GGAGAGCCTAGAGAGATGTCATTAGGAACGAACAGCTGGAATGCCAGGGG	9	+	68615579-68615628	9qC	Mus musculus RIKEN cDNA 9530091C08 gene (9530091C08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188844	ILMN_260908	9530091C08RIK	NM_177159.3	NM_177159.3		320440	141801720	NM_177159.3	9530091C08Rik	NP_796133.1	ILMN_2699803	002750196	S	3948	CTTCCTGTCATTCATGGAACTTCTCGTGCCTGCAATCCACTGGAGTTCTG	9	+	68617100-68617149	9qC	Mus musculus RIKEN cDNA 9530091C08 gene (9530091C08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199301	ILMN_331375	LOC245219	XR_030666.1	XR_030666.1		245219	149264430	XR_030666.1	LOC245219		ILMN_1252201	006040059	S	1348	TCGTCATCTCCAAACACATACAAGGATACATCCTGGAGAAAAACCCTACT					PREDICTED: Mus musculus similar to RIKEN cDNA 8430426H19 gene (LOC245219), misc RNA.					
Mus musculus	RefSeq	ILMN_217134	ILMN_217134	MCM10	NM_027290.1	NM_027290.1		70024	29789188	NM_027290.1	Mcm10	NP_081566.1	ILMN_2970532	004220326	S	3337	GCCATGGGACTCGGATAGAAATGCCTAAGCTCTCCTCACCTTTAGTGTGG	2	-	4908047-4908096	2qA1	Mus musculus minichromosome maintenance deficient 10 (S. cerevisiae) (Mcm10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C79164; AU018508; C330019M07Rik; 2410041F14Rik	C79164; AU018508; C330019M07Rik; 2410041F14Rik
Mus musculus	RefSeq	ILMN_198258	ILMN_198258	LOC381129	XM_355047.1	XM_355047.1			38083396	XM_355047.1	LOC381129		ILMN_1259821	007400709	S	619	GGCCCAACAGTCAGAAATGACGGATATAGGCAAGGAAGAGGAGTCTGTGC										
Mus musculus	Riken	ILMN_201975	ILMN_201975	3200001D21RIK	ri|3200001D21|ZX00035H23|AK014278|2285					AK014278	3200001D21Rik		ILMN_2546051	001090278	S	1640	CCCTTAAAGGCTCGTGTGTCAAACACCTGGGCCCCAGCTGCTGGCAATGT										
Mus musculus	Riken	ILMN_204940	ILMN_204940	D230026E03RIK	ri|D230026E03|PX00189K19|AK051967|3750					AK051967	D230026E03Rik		ILMN_1213804	002030113	S	3528	TGGCAGGCCATGTCTGGACTAAGGTCTTTTTGGACTGTCTCCAGGCCTCC										
Mus musculus	Riken	ILMN_205486	ILMN_205486	D030041N04RIK	ri|D030041N04|PX00180J15|AK050943|1522					AK050943	D030041N04Rik		ILMN_1245878	005260427	S	1268	GAAACAATGACAGAGATGGCGAGGAGAAACCGAGCGAAGCTGGGAGATGC										
Mus musculus	RefSeq	ILMN_219505	ILMN_219505	1810023F06RIK	NM_145449.1	NM_145449.1		217845	21703895	NM_145449.1	1810023F06Rik	NP_663424.1	ILMN_1232995	004610731	S	992	AGATGCACTGGTTCTTTGTACTTCAGAGAATGAGGGTACTTCAAAACCCT	12	-	104689159-104689208	12qE	Mus musculus RIKEN cDNA 1810023F06 gene (1810023F06Rik), mRNA.				ISG12(b2)	ISG12(b2)
Mus musculus	RefSeq	ILMN_217736	ILMN_217736	TGIF2	NM_173396.2	NM_173396.2		228839	118129800	NM_173396.2	Tgif2	NP_775572.1	ILMN_1212828	001110228	S	2409	TAGGAGACCCAGCAGGCTCAACTCTCTGTCACCCTGAGGCACTGCTGGGA	2	+	156680885-156680934	2qH1	Mus musculus TGFB-induced factor homeobox 2 (Tgif2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4921501K24; C81206; C80753; 5730599O09Rik	4921501K24; C81206; C80753; 5730599O09Rik
Mus musculus	MEEBO	ILMN_209499	ILMN_209499	KCNA6	scl28393.5.1_16	NM_013568.3			34328479	NM_013568.3	Kcna6		ILMN_2760927	003140612	S	5229	GCTGGTCTGATCAAAGGAGAGGAGGTGTTAGGATGATCTGGGATCGGAAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]		
Mus musculus	MEEBO	ILMN_209499	ILMN_209499	KCNA6	scl28393.5.1_16	NM_013568.3			34328479	NM_013568.3	Kcna6		ILMN_2596385	007000487	S	5288	GTGTGCTGCAGAGTCGCCCAGGCACTCGCTGGCTGAGGAAGAGTAACTAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]		
Mus musculus	RefSeq	ILMN_206837	ILMN_237689	CP	NM_001042611.1	NM_001042611.1		12870	110815852	NM_001042611.1	Cp	NP_001036076.1	ILMN_1232202	006200037	S	4353	TTTGCTTCACTGTTCTGTGTGTTGGGAGGACAAGGTCCGATTCTGTCTCC	3	+	19907398-19907447	3qA2	Mus musculus ceruloplasmin (Cp), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O [goid 4322] [evidence IDA]	D3Ertd555e	D3Ertd555e
Mus musculus	RefSeq	ILMN_199836	ILMN_199836	LOC383972	XM_357357.1	XM_357357.1			38077779	XM_357357.1	LOC383972		ILMN_2536660	002350372	S	182	ACAACAGCACCCCTGACAACAGCACCCCTGACAACAGCACCCCTGACAAC										
Mus musculus	MEEBO	ILMN_195971	ILMN_195971	5730466H23RIK	scl40497.6_233				23956179	NM_026576	5730466H23Rik		ILMN_2520417	006040482	S	10	TACTTACATACATTCTTTATCTTAAAGAACTAACTAATCTTTCCAGGATT										
Mus musculus	Riken	ILMN_205357	ILMN_205357	D030003E11RIK	ri|D030003E11|PX00179O03|AK050684|1214					AK050684	D030003E11Rik		ILMN_2571942	006180725	S	1164	AAGAGCCCATTGTCCCTCAAACACAGGAAGAGACCTGGGCAGAGCCACCC										
Mus musculus	RefSeq	ILMN_198692	ILMN_235499	LASS3	XM_907730.2	XM_907730.2		545975	149257397	XM_907730.2	Lass3	XP_912823.1	ILMN_1243498	004880075	S	1146	CTCCTACATCTTCCTCAACCTCCAACTCATGATCCTTCAGGGCCTCCACG				7qC	PREDICTED: Mus musculus longevity assurance homolog 3 (S. cerevisiae) (Lass3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]		
Mus musculus	RefSeq	ILMN_220523	ILMN_220523	UCK2	NM_030724.1	NM_030724.1		80914	13507679	NM_030724.1	Uck2	NP_109649.1	ILMN_2880529	004920615	S	961	AAGCGGCAGACGAACGGCTATCTCAACGGCTACACCCCTTCCCGCAAGAG	1	-	169063085-169063134	1qH2.3	Mus musculus uridine-cytidine kinase 2 (Uck2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + uridine = ADP + UMP [goid 4849] [evidence IEA]	UK; AI481316; AU020720; UMK; TSA903; Umpk; AU018180; AA407809	UK; AI481316; AU020720; UMK; TSA903; Umpk; AU018180; AA407809
Mus musculus	RefSeq	ILMN_220523	ILMN_220523	UCK2	NM_030724.1	NM_030724.1		80914	13507679	NM_030724.1	Uck2	NP_109649.1	ILMN_2880536	007050370	S	1162	CCACGGAGATGAAATGCCTTGATTTCCCTTTCTGCCTTTTTGTACTTTGG	1	-	169062884-169062933	1qH2.3	Mus musculus uridine-cytidine kinase 2 (Uck2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + uridine = ADP + UMP [goid 4849] [evidence IEA]	UK; AI481316; AU020720; UMK; TSA903; Umpk; AU018180; AA407809	UK; AI481316; AU020720; UMK; TSA903; Umpk; AU018180; AA407809
Mus musculus	MEEBO	ILMN_188932	ILMN_188932	ALDH3A2	scl40135.12_123				6680677	NM_007437	Aldh3a2		ILMN_2456946	003800221	S	2	CCTCACTGCCTTCCTGGGGTCCTAATTAACTCGGCCTACTCAATGAGAAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222360	ILMN_222360	FZD4	NM_008055.3	NM_008055.3		14366	142348436	NM_008055.3	Fzd4	NP_032081.2	ILMN_1212935	007650523	S	3009	GCCTTTCCCCCCTGTAGCATAAGAATGTTATCGGAGTTTGGTCTACTTGC	7	+	96557972-96558021	7qE1	Mus musculus frizzled homolog 4 (Drosophila) (Fzd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fz4	Fz4
Mus musculus	RefSeq	ILMN_221543	ILMN_221543	POU2F3	NM_011139.2	NM_011139.2		18988	119226248	NM_011139.2	Pou2f3	NP_035269.2	ILMN_2736986	002120008	S	334	TCCAGCAGCTCGTGCTGGTCCCTGGCCACTTGCAGTCTGTATCCCAGTTC	9	-	42953332-42953381	9qA5.1	Mus musculus POU domain, class 2, transcription factor 3 (Pou2f3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IGI]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IDA]	Otf11; Otf-11; Skin-1a; Skn-li; Skn-1a; Oct11; Oct-11a; Epoc-1; Skin	Otf11; Otf-11; Skin-1a; Skn-li; Skn-1a; Oct11; Oct-11a; Epoc-1; Skin
Mus musculus	RefSeq	ILMN_223398	ILMN_223398	PYCARD	NM_023258.3	NM_023258.3		66824	31581581	NM_023258.3	Pycard	NP_075747.2	ILMN_2936476	005810739	S	1156	GGCACCTAGAAACAAACCAGTCCGTAGAAGACTTTGGGCTCTGGGAACTC	7	-	135135696-135135745	7qF3	Mus musculus PYD and CARD domain containing (Pycard), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 16505] [evidence ISO]	TNS1; masc; Asc; TMS-1; 9130417A21Rik; CARD5	TNS1; masc; Asc; TMS-1; 9130417A21Rik; CARD5
Mus musculus	RefSeq	ILMN_223398	ILMN_223398	PYCARD	NM_023258.3	NM_023258.3		66824	31581581	NM_023258.3	Pycard	NP_075747.2	ILMN_2763498	006330594	S	990	TCCAGGTCAAGCTAAAAAGCGAGAGGGGGGGATGGGAACCAGGTAATGGT	7	-	135135862-135135911	7qF3	Mus musculus PYD and CARD domain containing (Pycard), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 16505] [evidence ISO]	TNS1; masc; Asc; TMS-1; 9130417A21Rik; CARD5	TNS1; masc; Asc; TMS-1; 9130417A21Rik; CARD5
Mus musculus	RefSeq	ILMN_220883	ILMN_220883	RRP12	NM_199447.2	NM_199447.2		107094	40804766	NM_199447.2	Rrp12	NP_955518.1	ILMN_2728118	006280128	S	4147	GAGACATTGCCAACATCTAGGAGTGGAAATGTGACGTCGCTACCTCTGAG	19	-	41937464-41937513	19qC3	Mus musculus ribosomal RNA processing 12 homolog (S. cerevisiae) (Rrp12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA408556; AA536972; mKIAA0690	AA408556; AA536972; mKIAA0690
Mus musculus	RefSeq	ILMN_208940	ILMN_258494	ACSL4	NM_019477.3	NM_019477.3		50790	75992926	NM_019477.3	Acsl4	NP_062350.3	ILMN_1244872	004640356	S	2280	ATTGAGCGAATGTATGGGGGCAAATAAAATGCGGCTCTCTGATTTCCATT	X	-	138755196-138755219:138755220-138755245	XqF2	Mus musculus acyl-CoA synthetase long-chain family member 4 (Acsl4), transcript variant 2, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence ISA]	AU018108; Facl4; ACS4; 9430020A05Rik; Lacs4	AU018108; Facl4; ACS4; 9430020A05Rik; Lacs4
Mus musculus	RefSeq	ILMN_213603	ILMN_213603	SLC25A26	NM_026255.4	NM_026255.4		67582	142347475	NM_026255.4	Slc25a26	NP_080531.2	ILMN_1256867	007160450	S	1031	AAACTGGGGCCACCGTCTCAGTCCTCTCAATAAATACTCCCGGTAAGGCC	6	+	94553792-94553841	6qD2	Mus musculus solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26 (Slc25a26), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Slc25a6; D6Bwg0781e; AW557176; 4930433D19Rik; 4933433F13Rik	Slc25a6; D6Bwg0781e; AW557176; 4930433D19Rik; 4933433F13Rik
Mus musculus	RefSeq	ILMN_198048	ILMN_198048	LOC277234	XM_203694.2	XM_203694.2			38080957	XM_203694.2	LOC277234		ILMN_1214240	006020086	S	2180	ACCTGATAAACAGCTTCGGTGAAAGGAGAAAGTGGGGAAAAGCCTTGAAG										
Mus musculus	MEEBO	ILMN_195057	ILMN_195057	MT-ND4L	scl0017720.1_306						mt-Nd4l		ILMN_2512204	003060209	S	14	TTATCCTTATTTATTATAACTTCAGTAACTTCCCTAAACTCCAACTCCAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]		
Mus musculus	Riken	ILMN_206491	ILMN_206491	D430029B19RIK	ri|D430029B19|PX00195E16|AK085041|3251					AK085041	D430029B19Rik		ILMN_1256169	004070753	S	2930	TCAGTGTAACCTCTGGGGTGCCTTTTGAAGCTCCGAACTCTGTTCCTCTG										
Mus musculus	Riken	ILMN_206698	ILMN_206698	LDLC	ri|C130079D02|PX00171N09|AK081817|1701					AK081817	Ldlc		ILMN_2582036	005900753	S	1585	GGGCACCTGGCCACATGCTCAGGGTTAATTACTGAGAATTCCCATCCTAG										
Mus musculus	RefSeq	ILMN_198635	ILMN_322302	LOC100044315	XM_001471707.1	XM_001471707.1		100044315	149272030	XM_001471707.1	LOC100044315	XP_001471757.1	ILMN_2532387	006650050	S	3141	GCATAGCTCGACTCAGTCTGGAGCAGCAGGAAGCCATCAAGAAGCTCCTG					PREDICTED: Mus musculus hypothetical protein LOC100044315 (LOC100044315), mRNA.					
Mus musculus	RefSeq	ILMN_185070	ILMN_185070	ZFP112	NM_021307.2	NM_021307.2		57745	113865972	NM_021307.2	Zfp112	NP_067282.2	ILMN_1221408	002970291	S	3396	CAGGAATATTTTCATCTGCAATAACCACAGTTTGGCTAGTTAGCATCCCC	7	+	24912860-24912909	7qA3	Mus musculus zinc finger protein 112 (Zfp112), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Znf228	Znf228
Mus musculus	RefSeq	ILMN_250809	ILMN_250809	CEACAM1	NM_001039187.1	NM_001039187.1		26365	85719312	NM_001039187.1	Ceacam1	NP_001034276.1	ILMN_3126609	001050465	A	822	GCGCCATTGCTGGCATCGTGATTGGAGTTGTGGCTGGGGTGGCTCTAATA	7	-	26251376-26251425	7qA3	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 1 (Ceacam1), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mmCGM2; Bgp; CD66a; Bgp1; Cea1; mmCGM1; mCEA1; Cea-7; bb-1; MHVR; mmCGM1a; C-CAM; Hv2; Mhv-1; Cea-1; Hv-2; Cea7	mmCGM2; Bgp; CD66a; Bgp1; Cea1; mmCGM1; mCEA1; Cea-7; bb-1; MHVR; mmCGM1a; C-CAM; Hv2; Mhv-1; Cea-1; Hv-2; Cea7
Mus musculus	RefSeq	ILMN_251353	ILMN_251353	OLFR456	NM_001011528.1	NM_001011528.1		259144	58372127	NM_001011528.1	Olfr456	NP_001011528.1	ILMN_3160851	007650504	S	801	TGAGCAGGACAAGGTGGTAGTGATCTTCTATGCTTTGGTCACCCCCATGA	6	-	42436340-42436389	6qB2.1	Mus musculus olfactory receptor 456 (Olfr456), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR257-7P	MOR257-7P
Mus musculus	Riken	ILMN_202079	ILMN_202079	2700025J07RIK	ri|2700025J07|ZX00063E06|AK012290|929					AK012290	2700025J07Rik		ILMN_1247145	002260338	S	559	GGCACCTGTTCCTCTTGACGATTCCAACAGGTAATTCCACATTGGTGCCT										
Mus musculus	RefSeq	ILMN_210887	ILMN_210887	MTCH2	NM_019758.2	NM_019758.2		56428	46909582	NM_019758.2	Mtch2	NP_062732.1	ILMN_1229238	001090577	S	138	TGCCATCATGGCGGACGCGGCCAGTCAGGTGCTCCTGGGCTCCGGTCTCA	2	+	90687449-90687455:90687456-90687498	2qE1	Mus musculus mitochondrial carrier homolog 2 (C. elegans) (Mtch2), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930539J07Rik; 2310034D24Rik; HSPC032	4930539J07Rik; 2310034D24Rik; HSPC032
Mus musculus	RefSeq	ILMN_210887	ILMN_210887	MTCH2	NM_019758.2	NM_019758.2		56428	46909582	NM_019758.2	Mtch2	NP_062732.1	ILMN_2848583	007200168	S	1928	GGTTCTTAGGATATTGTCCAGCTCAAATGTCAGACCCTCAGTTAGGCATG	2	+	90706299-90706348	2qE1	Mus musculus mitochondrial carrier homolog 2 (C. elegans) (Mtch2), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930539J07Rik; 2310034D24Rik; HSPC032	4930539J07Rik; 2310034D24Rik; HSPC032
Mus musculus	RefSeq	ILMN_210887	ILMN_210887	MTCH2	NM_019758.2	NM_019758.2		56428	46909582	NM_019758.2	Mtch2	NP_062732.1	ILMN_2610204	006280056	S	1925	CATGGTTCTTAGGATATTGTCCAGCTCAAATGTCAGACCCTCAGTTAGGC	2	+	90706296-90706345	2qE1	Mus musculus mitochondrial carrier homolog 2 (C. elegans) (Mtch2), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930539J07Rik; 2310034D24Rik; HSPC032	4930539J07Rik; 2310034D24Rik; HSPC032
Mus musculus	RefSeq	ILMN_221553	ILMN_221553	PSMD12	NM_025894.1	NM_025894.1		66997	13385383	NM_025894.1	Psmd12	NP_080170.1	ILMN_2896805	003130484	S	1047	CCTCAGAGACCCCGGCGACTGACGTTTTCAGCTCTACAGAAGAAGGGGAA	11	+	107310809-107310858	11qE1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 (Psmd12), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			P55; AI480719; 1500002F15Rik	P55; AI480719; 1500002F15Rik
Mus musculus	RefSeq	ILMN_220564	ILMN_220564	SERPINB12	NM_027971.1	NM_027971.1		71869	21735460	NM_027971.1	Serpinb12	NP_082247.1	ILMN_3140610	007650035	A	1470	GGGCATTTGTGTTTGGCTGAGTGCCTGAAGCTGACCACCTGCTGCTACAG	1	+	108784408-108784457	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12 (Serpinb12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of the serine endopeptidase trypsin [goid 30304] [evidence ISS]	4833409F13Rik; 2300003F07Rik	4833409F13Rik; 2300003F07Rik
Mus musculus	Riken	ILMN_205967	ILMN_205967	XPR1	ri|C230078O06|PX00176P11|AK048887|1606					AK048887	Xpr1		ILMN_1219592	006420709	S	1263	AGCACAGTGGGCCAGGAGCCACAAGATGGAGGCCAAAATGAGGGCCAAGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]		
Mus musculus	MEEBO	ILMN_211215	ILMN_211215	ACE	scl0001510.1_130	NM_207624.1			46559388	NM_207624.1	Ace		ILMN_2613682	001940605	S	1872	GTCCTAGGCTGGCCAGAGAATCAGTGGCGTCCACCGTTACCCGACAACTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42447] [evidence IDA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IDA]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the release of C-terminal dipeptides from a polypeptide chain [goid 8241] [evidence IDA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	Riken	ILMN_204694	ILMN_204694	A330046D11RIK	ri|A330046D11|PX00132C09|AK039466|2017					AK039466	A330046D11Rik		ILMN_2566923	003130671	S	1824	GACTCTGGATTTTCTGGCTTTCCCTGTGCCCAATGTAGTGACGGCTTCAG										
Mus musculus	RefSeq	ILMN_212563	ILMN_212563	9430015G10RIK	NM_145557.1	NM_145557.1		230996	21704097	NM_145557.1	9430015G10Rik	NP_663532.1	ILMN_2963754	002940564	S	2199	GAAGTCCTGCCAGGTAGTTTGATAAGAATGCCTACCCAGTGCCCCCAGGC	4	+	154970734-154970783	4qE2	Mus musculus RIKEN cDNA 9430015G10 gene (9430015G10Rik), mRNA.					
Mus musculus	MEEBO	ILMN_223359	ILMN_223359	A630098G03RIK	scl25108.1.1_4				46849800	NM_177669	A630098G03Rik		ILMN_2763039	005570482	S	43	CTCTGTTCTTTCTTTTCACACAGTAACATTGACTTCCACAGAATTGTCTC										
Mus musculus	RefSeq	ILMN_204136	ILMN_240806	LOC432471	XM_977739.1	XM_977739.1		432471	94388270	XM_977739.1	LOC432471	XP_982833.1	ILMN_1246680	001400274	S	1511	CCTGACCCGTTGAGGACAGAGGGACAAGACAGGAAGGTGAGCAGTGATGA	10	+	72946646-72946695	10qB5.3	PREDICTED: Mus musculus hypothetical gene supported by AK080816 (LOC432471), mRNA.					
Mus musculus	MEEBO	ILMN_189132	ILMN_189132	5730407I07RIK	scl10769.1.1_54						5730407I07Rik		ILMN_2458641	003400711	S	20	TACCAGTTAGTATATCCCAAAGAATTTCCAAGCTAAACTTACCTCTGAGC										
Mus musculus	Riken	ILMN_203255	ILMN_203255	LMO4	ri|8030411F07|PX00102N21|AK033097|1630					AK033097	Lmo4		ILMN_1247702	005910068	S	1431	CCCAACAGGCTTCAGGGCAGCTAATGGAAAGAATTCAGGAGGTCAGGTGC						Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191698	ILMN_191698	10181072_290	10181072_290						10181072_290		ILMN_2481382	003390376	S	19	GCTGCACCCAGTTAGGGGCAACCCGTATAGGGACCGTGGAGTGTTGTACA										
Mus musculus	MEEBO	ILMN_221296	ILMN_221296	AP3B2	scl0011775.1_36	XM_358374.1			38088793	XM_358374.1	Ap3b2		ILMN_2733615	002100280	S	2376	GGAAATGGGCCAGAGAGCCTGTTTTATTGAGCTTATGTGTTGGGAGGCAA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223173	ILMN_223173	RORC	NM_011281.1	NM_011281.1		19885	6755343	NM_011281.1	Rorc	NP_035411.1	ILMN_2760272	004260152	S	2064	GACATGGATCTAGCTCAGAGACTGGTGGCAAGCCCCCAGAAGGACCTGTA	3	+	94201682-94201731	3qF2.1	Mus musculus RAR-related orphan receptor gamma (Rorc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; The process whose specific outcome is the progression of mucosal- associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48537] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of an alpha-beta T cell [goid 46632] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	Nr1f3; RORgamma; Thor; TOR	Nr1f3; RORgamma; Thor; TOR
Mus musculus	RefSeq	ILMN_223173	ILMN_223173	RORC	NM_011281.1	NM_011281.1		19885	6755343	NM_011281.1	Rorc	NP_035411.1	ILMN_2900431	000580743	S	2479	GCCTGAGGTTCTAATTCATACAGGACACCAGAATTCATCCCAGCTCCAGC	3	+	94202097-94202146	3qF2.1	Mus musculus RAR-related orphan receptor gamma (Rorc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; The process whose specific outcome is the progression of mucosal- associated lymphoid tissue over time, from its formation to the mature structure. Mucosal-associated lymphoid tissue is typically found as nodules associated with mucosal epithelia with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48537] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of an alpha-beta T cell [goid 46632] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]	Nr1f3; RORgamma; Thor; TOR	Nr1f3; RORgamma; Thor; TOR
Mus musculus	RefSeq	ILMN_198467	ILMN_239297	PRKG1	NM_001013833.1	NM_001013833.1		19091	62177130	NM_001013833.1	Prkg1	NP_001013855.1	ILMN_1253373	002490195	S	425	AGGTCCTTCCACGACCTGCGCCAGGCGTTCCGGAAGTTCACTAAATCCGA	19	-	31839049-31839098	19qC1	Mus musculus protein kinase, cGMP-dependent, type I (Prkg1), transcript variant 1, mRNA.	An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]	Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cGMP [goid 4692] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IDA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]	MGC132849; CGKI; AW125416; Prkgr1b; Prkg1b	MGC132849; CGKI; AW125416; Prkgr1b; Prkg1b
Mus musculus	RefSeq	ILMN_222213	ILMN_222213	TEX19.2	NM_027622.2	NM_027622.2		70956	142352532	NM_027622.2	Tex19.2	NP_081898.1	ILMN_1212878	005900465	S	1977	GGATTCAGAGTTGACTGCTTTGTGCTACTTGCTCAGTTCGTGCCCTGTGC	11	-	120977548-120977597	11qE2	Mus musculus testis expressed gene 19.2 (Tex19.2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-400P17.8	RP23-400P17.8
Mus musculus	Riken	ILMN_205815	ILMN_205815	A430013B18RIK	ri|A430013B18|PX00134O12|AK039830|3332					AK039830	A430013B18Rik		ILMN_1260338	006560626	S	3022	GGCATATTGGTCACACAGCACTCTTCTAAGGGGAAAGATTGATGCTGCTG										
Mus musculus	RefSeq	ILMN_196457	ILMN_196457	AIM1L	XM_131754.7	XM_131754.7		230806	94372629	XM_131754.7	Aim1l	XP_131754.6	ILMN_1214944	005080600	S	4680	CACCAGTTTCCTTCAGGAGGCTTTTGCTGGGATGAAGTGTTTTATACAGA	4	+	133648338-133648387	4qD3	PREDICTED: Mus musculus absent in melanoma 1-like, transcript variant 1 (Aim1l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_196457	ILMN_196457	AIM1L	XM_131754.7	XM_131754.7		230806	94372629	XM_131754.7	Aim1l	XP_131754.6	ILMN_1224946	005870376	S	4391	TGAAGATGGCCTGCTGAAGAACCAGATGGCCCCCACCATGAGCCTACAGG	4	+	133647127-133647151:133647965-133647989	4qD3	PREDICTED: Mus musculus absent in melanoma 1-like, transcript variant 1 (Aim1l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_225115	ILMN_225115	2600011E07RIK	NM_028113.1	NM_028113.1		72125	58037286	NM_028113.1	2600011E07Rik	NP_082389.1	ILMN_2967750	003890762	S	2363	GAGGGCCTTGCGGAGTCACTGAACAACAGGATTCTTGCCTTTCTTTCCAG	14	+	59334818-59334867	14qD1	Mus musculus RIKEN cDNA 2600011E07 gene (2600011E07Rik), mRNA.					
Mus musculus	Riken	ILMN_205325	ILMN_205325	A130098G01RIK	ri|A130098G01|PX00126I24|AK038360|2582					AK038360	A130098G01Rik		ILMN_2571699	004200349	S	1945	GCTGAGGCTGGAGAATCGTAGCCTATGGTAGACTGTAAATCCAAGACCAG										
Mus musculus	MEEBO	ILMN_184927	ILMN_184927	TOR3A	scl000762.1_8				12963524	NM_023141	Tor3a		ILMN_2422743	000460010	S	20	GGTCGCTGGATGTGCTCACTGCATGGCTCTGTCGCTTTCAGGACTGCTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198821	ILMN_311643	EG634762	XR_032950.1	XR_032950.1		634762	149234232	XR_032950.1	EG634762		ILMN_1214492	002070010	S	1997	CAGATTCCTCCTCTCTTCAAGTTCAACACAGAATCCATTCTGGAGATATA	1	+	119883582-119883631	1qE2.3	PREDICTED: Mus musculus predicted gene, EG634762 (EG634762), misc RNA.					
Mus musculus	RefSeq	ILMN_215667	ILMN_215667	NEK8	NM_080849.2	NM_080849.2		140859	32307137	NM_080849.2	Nek8	NP_543125.1	ILMN_2662243	002810112	S	2331	TGCAAGGCTCCAGTCTGGCAGGGGTCAACAGAAGGACGGCCTTCAAAACC	11	-	77980027-77980076	11qB5	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 8 (Nek8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	4632401F23Rik; jck	4632401F23Rik; jck
Mus musculus	Riken	ILMN_203973	ILMN_203973	A530017D12RIK	ri|A530017D12|PX00140I15|AK040704|2088					AK040704	A530017D12Rik		ILMN_1233801	002140722	S	1636	CATCTCTGGGCAGAAAAAAAGAGAGCAGGCAAAGGCCAGAAGTCCAGTGC										
Mus musculus	RefSeq	ILMN_218367	ILMN_218367	GPATCH3	NM_172876.2	NM_172876.2		242691	141802392	NM_172876.2	Gpatch3	NP_766464.1	ILMN_2694857	002600369	S	1327	CCTGAGGCCCTGGATGGAGATGGCCAGCATCCTAGATGCAAGCGCGGCTT	4	+	133138972-133139021	4qD2.3	Mus musculus G patch domain containing 3 (Gpatch3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D930035B09Rik; MGC106307; Gpatc3	D930035B09Rik; MGC106307; Gpatc3
Mus musculus	RefSeq	ILMN_188949	ILMN_188949	KLF17	NM_029416.2	NM_029416.2		75753	88853590	NM_029416.2	Klf17	NP_083692.2	ILMN_2469125	005700088	S	2215	GCTTTCCTGTATTTGCCTGGAAAGTTCTGGAGTTAAACCACCCAGCTGGC	4	-	117430594-117430643	4qD2.1	Mus musculus Kruppel-like factor 17 (Klf17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfp393; AU043468; C85123; AA420409; D4Ertd561e; Gzf; 7420700M05Rik	Zfp393; AU043468; C85123; AA420409; D4Ertd561e; Gzf; 7420700M05Rik
Mus musculus	RefSeq	ILMN_188949	ILMN_188949	KLF17	NM_029416.2	NM_029416.2		75753	88853590	NM_029416.2	Klf17	NP_083692.2	ILMN_1226178	002630707	S	906	GCTGTGGAAAATCTTATACCAAGCGCTCTCACCTTGTGAGTCACCAACGC	4	-	117432929-117432978	4qD2.1	Mus musculus Kruppel-like factor 17 (Klf17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfp393; AU043468; C85123; AA420409; D4Ertd561e; Gzf; 7420700M05Rik	Zfp393; AU043468; C85123; AA420409; D4Ertd561e; Gzf; 7420700M05Rik
Mus musculus	RefSeq	ILMN_215067	ILMN_215067	SUV420H2	NM_146177.1	NM_146177.1		232811	22122710	NM_146177.1	Suv420h2	NP_666289.1	ILMN_1260420	003120367	S	2047	TTTTTCACGGTGCTATCCCTGGTGCTACTGGGGTGTCGGGGAGGCTTCCT	7	+	4698989-4699038	7qA1	Mus musculus suppressor of variegation 4-20 homolog 2 (Drosophila) (Suv420h2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the addition of a methyl group onto lysine at position 20 of the histone H4 protein [goid 42799] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	MGC36471; BC024816; Suv4-20h2	MGC36471; BC024816; Suv4-20h2
Mus musculus	MEEBO	ILMN_193682	ILMN_193682	2210420N10RIK	scl070137.4_74						2210420N10Rik		ILMN_2499470	001980187	S	2	GCCTTGAGGAGGAAAGTCGAACTTGTAGAGCTATCTGTAATTTCCTAGTA										
Mus musculus	MEEBO	ILMN_184768	ILMN_184768	CSMD2	scl24932.1.1_293						Csmd2		ILMN_2421411	001690750	S	6	CCCTGTATATGAGGCTTCCCCTAGGGTTCTGCGTTATGGGACTTTCCGGA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_200830	ILMN_200830	LOC385382	XM_358217.1	XM_358217.1			38086423	XM_358217.1	LOC385382		ILMN_2540159	000730050	S	10	ACAGCAACATGTGGGTCTGTGTTCAGAGATGTTGAAGCAGTTCAGAAATT										
Mus musculus	RefSeq	ILMN_191058	ILMN_241596	REXO1	NM_025852.3	NM_025852.3		66932	118150646	NM_025852.3	Rexo1	NP_080128.2	ILMN_1245568	003450228	S	3961	TGAGACCAACCCTCAGCCCAACCCCACACCTGCCCAACGTGACATCACCT	10	-	80004909-80004958	10qC1	Mus musculus REX1, RNA exonuclease 1 homolog (S. cerevisiae) (Rexo1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]	AW050347; 2610511M11Rik; EloA-BP1; 1700021P10Rik; Tceb3bp1	AW050347; 2610511M11Rik; EloA-BP1; 1700021P10Rik; Tceb3bp1
Mus musculus	RefSeq	ILMN_191058	ILMN_241596	REXO1	NM_025852.3	NM_025852.3		66932	118150646	NM_025852.3	Rexo1	NP_080128.2	ILMN_2592554	005570452	S	3881	CTGTAATAAAACATGACAGCTGACCACGCGTCTCCCAAGCTCCAGCTGCA	10	-	80004989-80005038	10qC1	Mus musculus REX1, RNA exonuclease 1 homolog (S. cerevisiae) (Rexo1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]	AW050347; 2610511M11Rik; EloA-BP1; 1700021P10Rik; Tceb3bp1	AW050347; 2610511M11Rik; EloA-BP1; 1700021P10Rik; Tceb3bp1
Mus musculus	RefSeq	ILMN_199020	ILMN_199020	LOC215086	XM_137083.3	XM_137083.3			38090462	XM_137083.3	LOC215086		ILMN_1250399	003830301	S	1038	CCGTTGGCTGTACAACGAGGACCAAATGGCTGTGGAGAAGCTCTTCGATG										
Mus musculus	MEEBO	ILMN_187053	ILMN_187053	1110021P09RIK	scl068600.1_95						1110021P09Rik		ILMN_2440765	002760504	S	9	CAAAAGGGAAAGAAGAATGTGATGTAAGTCTATTTACTCAAAATATGGTT										
Mus musculus	RefSeq	ILMN_215801	ILMN_313569	PCDH10	NM_001098170.1	NM_001098170.1		18526	148271083	NM_001098170.1	Pcdh10	NP_001091640.1	ILMN_2727239	006060131	S	3418	GCCATCGTCACCGGGTACAGCGACCAGCAACCAGACATCATTTCCAACGG				3qB	Mus musculus protocadherin 10 (Pcdh10), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1400; 6430521D13Rik; 6430703F07Rik	mKIAA1400; 6430521D13Rik; 6430703F07Rik
Mus musculus	MEEBO	ILMN_211532	ILMN_211532	SP1	scl020683.28_44	NM_013672.1			7305514	NM_013672.1	Sp1		ILMN_2616755	004810053	S	3813	GTGGTTCCTAAGGGAAAGGGAAGCACACAATCATGGGAACGATAGCCCAG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The process by which the anatomical structures of the eye are generated and organized during embryonic development. Morphogenesis pertains to the creation of form [goid 48596] [evidence IGI]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IGI]; A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother [goid 60136] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process by which a myeloid precursor cell acquires specializes features of a megakaryocyte [goid 30219] [evidence IGI]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199833	ILMN_313740	LOC665235	XR_031650.1	XR_031650.1		665235	149260000	XR_031650.1	LOC665235		ILMN_2536649	001690524	S	309	GAGCACATCAAGCACTCGAAGAGCAGGGACAGCTTCCTGAAGCGGGTGAA	9	-	57685810-57685859	9qB	PREDICTED: Mus musculus similar to hCG1642689 (LOC665235), misc RNA.					
Mus musculus	RefSeq	ILMN_214026	ILMN_214026	MRPS14	NM_025474.3	NM_025474.3		64659	118130313	NM_025474.3	Mrps14	NP_079750.1	ILMN_1256760	001820482	S	1720	TTTATTATAAGTAAAACATAGTGGTACCTTTATATTAATTCTATATTTAT	1	+	162131067-162131116	1qH2.1	Mus musculus mitochondrial ribosomal protein S14 (Mrps14), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	AL022847; 1810032L21Rik; Rpms14	AL022847; 1810032L21Rik; Rpms14
Mus musculus	RefSeq	ILMN_251709	ILMN_251709	PPP3CA	NM_008913.1	NM_008913.1		19055	42415472	NM_008913.1	Ppp3ca	NP_032939.1	ILMN_2971286	002140528	S	1708	GTTGGATGTTCTTGCCTCTGAAGGTAGCTTGTTTGCTCTGGGGGCCAGGA	3	+	136872680-136872729	3qG3	Mus musculus protein phosphatase 3, catalytic subunit, alpha isoform (Ppp3ca), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin [goid 5955] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IDA]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IDA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CnA; AW413465; Calna; AI841391; MGC106804; CN; Caln; 2900074D19Rik	CnA; AW413465; Calna; AI841391; MGC106804; CN; Caln; 2900074D19Rik
Mus musculus	MEEBO	ILMN_194258	ILMN_194258	B130063F10RIK	scl47729.1.135_89						B130063F10Rik		ILMN_2504796	005550747	S	1	GCCACATATTGCTGCCTTCAGCAAACCTGAGCCAAGAAAATGAACTGAAG										
Mus musculus	RefSeq	ILMN_215158	ILMN_215158	HRG	NM_053176.1	NM_053176.1		94175	16716460	NM_053176.1	Hrg	NP_444406.1	ILMN_2815337	004880092	S	1600	GGATATACACCTCCAAAATAAAACCTGATTCCTTGGTAGGGGGAAGAGGA	16	+	22961637-22961657:22961658-22961686	16qB1	Mus musculus histidine-rich glycoprotein (Hrg), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the frequency, rate or extent of fibrinolysis, an ongoing process that solubilizes fibrin, resulting in the removal of small blood clots [goid 51918] [evidence IMP]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IMP]	AI265597; AW413091; D16JH2; HRGP; D18020; HPRG	AI265597; AW413091; D16JH2; HRGP; D18020; HPRG
Mus musculus	RefSeq	ILMN_215158	ILMN_215158	HRG	NM_053176.1	NM_053176.1		94175	16716460	NM_053176.1	Hrg	NP_444406.1	ILMN_2656185	006100300	S	965	TTCCACAACTGCCCCCTGGCTATCCCCCTCATTCTGGTGCCAACAGAACC	16	+	22961002-22961051	16qB1	Mus musculus histidine-rich glycoprotein (Hrg), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the frequency, rate or extent of fibrinolysis, an ongoing process that solubilizes fibrin, resulting in the removal of small blood clots [goid 51918] [evidence IMP]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IMP]	AI265597; AW413091; D16JH2; HRGP; D18020; HPRG	AI265597; AW413091; D16JH2; HRGP; D18020; HPRG
Mus musculus	RefSeq	ILMN_233855	ILMN_233855	OLFR190	NM_146397.1	NM_146397.1		258392	27544954	NM_146397.1	Olfr190	NP_666509.1	ILMN_2927112	005220091	S	751	GGGCCTCTTCTCATCATGTATATTTTCCCCGTGTCCCAAGAAGCAGATGG	16	-	59074104-59074153	16qC1.3	Mus musculus olfactory receptor 190 (Olfr190), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123482; MGC123481; MOR183-4	MGC123482; MGC123481; MOR183-4
Mus musculus	RefSeq	ILMN_258804	ILMN_258804	5430437P03RIK	NM_026636.1	NM_026636.1		68251	30794445	NM_026636.1	5430437P03Rik	NP_080912.1	ILMN_2801798	002030524	S	1159	TGCTGGAGGAGGACGAGGAGGCTGGAGAAGAGGAAGCCACTGTGTGAACT	8	+	73928251-73928297:73928298-73928300	8qB3.3	Mus musculus RIKEN cDNA 5430437P03 gene (5430437P03Rik), mRNA.					
Mus musculus	Riken	ILMN_203162	ILMN_203162	9930102A09RIK	ri|9930102A09|PX00062B21|AK037041|1962					AK037041	9930102A09Rik		ILMN_1215017	002750689	S	1216	CTCTAAGTTGAAGTCACTGGGAGGAAAGGGGAGGGGGACTTACCTCTGCC										
Mus musculus	MEEBO	ILMN_210723	ILMN_210723	4632407F12RIK	scl0002003.1_281	XM_110709.2			25055650	XM_110709.2	4632407F12Rik		ILMN_2711532	005860768	S	2488	TGTATGTCTGGTGGGCTTGGGGGAATTCAAGGGAGGGCCTAAAAGCACTT										
Mus musculus	RefSeq	ILMN_187490	ILMN_233740	CDH3	NM_007665.2	NM_007665.2		12560	141802137	NM_007665.2	Cdh3	NP_031691.1	ILMN_1222853	000840025	S	2852	CCCCACTTGGAATGGCTCCCTCTCTTTAGAAAGAGGCCCCTAACTAAGGC	8	+	109079668-109079717	8qD3	Mus musculus cadherin 3 (Cdh3), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	P-cadherin; AI385538; Cadp; Pcad	P-cadherin; AI385538; Cadp; Pcad
Mus musculus	Riken	ILMN_204087	ILMN_204087	A830054H12RIK	ri|A830054H12|PX00155N05|AK043936|3811					AK043936	A830054H12Rik		ILMN_2562261	003870730	S	3012	GGTTAGGCCCGAATCTTGGCACCAAAAGAGTGTGCATCTGCTCTAGCTGC										
Mus musculus	Riken	ILMN_203309	ILMN_203309	YBX3	ri|4833436O22|PX00028P19|AK029441|2683					AK029441	Ybx3		ILMN_1246770	006510112	S	2498	CAGCCTTGGCCTGAGAGTTTGAGCTGGTACACGGATGGCAGTAGCCTGGA										
Mus musculus	RefSeq	ILMN_211489	ILMN_211489	PAX8	NM_011040.3	NM_011040.3		18510	118130210	NM_011040.3	Pax8	NP_035170.1	ILMN_1256173	000780392	S	2322	GCTCTTTCCCCACATACAACCTCACTGTAAATACCGTAAATGAAACTCTG	2	-	24276235-24276284	2qA3	Mus musculus paired box gene 8 (Pax8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Pax-8	Pax-8
Mus musculus	RefSeq	ILMN_211489	ILMN_211489	PAX8	NM_011040.3	NM_011040.3		18510	118130210	NM_011040.3	Pax8	NP_035170.1	ILMN_2616389	002320603	S	1084	GCCATAAAGCAGGAAACCCCAGAGCTCTCCAGTTCTAGCTCCACCCCTTC	2	-	24291422-24291471	2qA3	Mus musculus paired box gene 8 (Pax8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Pax-8	Pax-8
Mus musculus	RefSeq	ILMN_192880	ILMN_192880	V1RH20	NM_134243.1	NM_134243.1		171277	21717794	NM_134243.1	V1rh20	NP_599004.1	ILMN_2492196	003390139	S	772	ACCATAGAGAATTATTCTACAGTACTAGATGTTCCAGAGTTTTTAACCAT	13	-	22943543-22943592	13qA3.1	Mus musculus vomeronasal 1 receptor, H20 (V1rh20), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_200962	ILMN_200962	LOC381922	XM_358678.1	XM_358678.1			38087419	XM_358678.1	LOC381922		ILMN_2540617	004670114	S	93	CCTTGATATAACTCTGGGGTCACCGCCTCCAAGAAGGAATCAGGAGAGCC										
Mus musculus	RefSeq	ILMN_221856	ILMN_221856	PIK3CA	NM_008839.1	NM_008839.1		18706	6679316	NM_008839.1	Pik3ca	NP_032865.1	ILMN_2825201	004230615	S	2897	AGGGAGCACAAGAGTACACCAAGACCAGAGAGTTTGAGAGGTTTCAGGAG	3	+	32360731-32360770:32361483-32361492	3qA3	Mus musculus phosphatidylinositol 3-kinase, catalytic, alpha polypeptide (Pik3ca), mRNA.	A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IPI]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IDA]; Interacting selectively with any of the insulin receptor substrate (IRS) proteins, adaptor proteins that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex [goid 43560] [evidence IPI]	p110; MGC161268; caPI3K; 6330412C24Rik	p110; MGC161268; caPI3K; 6330412C24Rik
Mus musculus	RefSeq	ILMN_223204	ILMN_223204	OLFR344	NM_146628.1	NM_146628.1		258621	33239293	NM_146628.1	Olfr344	NP_666839.1	ILMN_2990335	000670138	S	437	GAATGTTCTGGGTCTTATCTTCAGCCAATGCCCTTGTGCAAACCCTTCTC	2	+	36424556-36424605	2qB	Mus musculus olfactory receptor 344 (Olfr344), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR136-12	MOR136-12
Mus musculus	RefSeq	ILMN_223204	ILMN_223204	OLFR344	NM_146628.1	NM_146628.1		258621	33239293	NM_146628.1	Olfr344	NP_666839.1	ILMN_2760721	004610491	S	799	CCAGTGAAAAAAATGCCATTGTGGCTGTTATGTACACAGTTGTCACACCT	2	+	36424918-36424967	2qB	Mus musculus olfactory receptor 344 (Olfr344), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR136-12	MOR136-12
Mus musculus	RefSeq	ILMN_247648	ILMN_247648	V1RB9	NM_053230.1	NM_053230.1		113857	16716542	NM_053230.1	V1rb9	NP_444460.1	ILMN_2869205	005810221	S	562	GCGATAGCCATCAGGGAAGCCTTTCTCATTAGTCTCTTTGCCCTGTGCAG	6	+	89697037-89697086	6qD1	Mus musculus vomeronasal 1 receptor, B9 (V1rb9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]	V1RA12	V1RA12
Mus musculus	Riken	ILMN_203736	ILMN_203736	CDC25A	ri|9830119L18|PX00118I09|AK036499|2445					AK036499	Cdc25a		ILMN_1214835	006590047	S	2176	CAGCCCTGGGGAAGCTAAGGCAGAGGATCAGAAGTGTAAAGCCAGCCTGA						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through M phase, the part of the mitotic cell cycle during which mitosis takes place [goid 87] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192213	ILMN_227180	CENPE	NM_173762.4	NM_173762.4		229841	115648100	NM_173762.4	Cenpe	NP_776123.3	ILMN_2759415	007510068	S	1771	GTTTCCAACTTAAAGAATTTAATTAAACACGCAGAAGAATATAATCAAGA	3	+	134896710-134896759	3qG3	Mus musculus centromere protein E (Cenpe), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	The process by which spindle microtubules become physically associated with the proteins making up the kinetochore complex [goid 8608] [evidence TAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	312kDa; AU019344; CENP-E; BC049989; Kif10; C530022J18	312kDa; AU019344; CENP-E; BC049989; Kif10; C530022J18
Mus musculus	RefSeq	ILMN_212363	ILMN_261447	GSG1L	XM_914623.2	XM_914623.2		269994	94381312	XM_914623.2	Gsg1l	XP_919716.1	ILMN_2625567	001770598	S	1048	ACGTGAGTGAAGAGGAAGACTTCCGCCTTGCCTGCCGCCACGAGAGATAC				7qF3	PREDICTED: Mus musculus GSG1-like (Gsg1l), mRNA.					
Mus musculus	RefSeq	ILMN_189624	ILMN_261447	GSG1L	XM_914623.2	XM_914623.2		269994	94381312	XM_914623.2	Gsg1l	XP_919716.1	ILMN_2462901	005700164	S	3812	TAGAAAACTGTGTACGGGCGTGTCCACGCTCCAGATGCAGGCACTGCTGC				7qF3	PREDICTED: Mus musculus GSG1-like (Gsg1l), mRNA.					
Mus musculus	RefSeq	ILMN_199723	ILMN_246442	5330432B20RIK	XM_976590.1	XM_976590.1		99937	94370711	XM_976590.1	5330432B20Rik	XP_981684.1	ILMN_2635860	004640731	S	1971	GCACAGAGCTCCTTACAGCAGCATGAAAATAGCCCAGGTGTTCTACCCCC					PREDICTED: Mus musculus RIKEN cDNA 5330432B20 gene (5330432B20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_192207	ILMN_246442	5330432B20RIK	XM_976590.1	XM_976590.1		99937	94370711	XM_976590.1	5330432B20Rik	XP_981684.1	ILMN_2485989	000240332	S	2118	ATAAATTACAACGTATGAAACATGGCAAGCTAACATAGCTATTAACAAGG					PREDICTED: Mus musculus RIKEN cDNA 5330432B20 gene (5330432B20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218725	ILMN_218725	OLFR1350	NM_146389.1	NM_146389.1		258384	33239059	NM_146389.1	Olfr1350	NP_666501.1	ILMN_2699462	005570504	S	874	AACAAGGACATGAAAGCAGCTCTGCGGAAGCTTTATCCACAGGTGCCATC	7	+	6523577-6523626	7qA1	Mus musculus olfactory receptor 1350 (Olfr1350), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR222-3; MGC123533	MOR222-3; MGC123533
Mus musculus	MEEBO	ILMN_187896	ILMN_187896	SCL0002986.1_2	scl0002986.1_2	BC051701.1			30704238	BC051701.1	scl0002986.1_2		ILMN_2448060	004200102	S	9	AATTGATATTCAAGCCTATTTAAGTCAATGGCAAGATGAGCTTCTTAAAA										
Mus musculus	RefSeq	ILMN_237524	ILMN_237524	ARSI	NM_001038499.1	NM_001038499.1		545260	84370327	NM_001038499.1	Arsi	NP_001033588.1	ILMN_2852844	005270619	S	1442	GACCCGATGTAGTCCGCACCCTTCTGGCTCGCCTGGCTGATTATAACCGT	18	+	61077142-61077191	18qE1	Mus musculus arylsulfatase i (Arsi), mRNA.				BC020108	BC020108
Mus musculus	RefSeq	ILMN_223006	ILMN_223006	JTB	NM_206924.2	NM_206924.2		23922	124377999	NM_206924.2	Jtb	NP_996807.1	ILMN_1226138	000670288	S	692	GGCGTTGTGGTGGCTGTAGCTTTAGTCTTCGCCTGCCTTGTCATCGTTCG	3	+	90035849-90035879:90035868-90035886	3qF1	Mus musculus jumping translocation breakpoint (Jtb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm622	Gm622
Mus musculus	RefSeq	ILMN_186748	ILMN_230584	UTRN	NM_011682.4	NM_011682.4		22288	110431377	NM_011682.4	Utrn	NP_035812.3	ILMN_2475832	006760328	S	11038	GGATGACTACACTAAAAATCCTGTGGACTTTAACGGCAAGCTGCTGGGGT	10	-	12103280-12103329	10qA1	Mus musculus utrophin (Utrn), mRNA.	A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	The process whose specific outcome is the progression of the adult somatic muscle over time, from its formation to the mature structure [goid 7527] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DRP; Dmdl; AA589569	DRP; Dmdl; AA589569
Mus musculus	RefSeq	ILMN_214534	ILMN_241291	CTCF	NM_181322.2	NM_181322.2		13018	31342434	NM_181322.2	Ctcf	NP_851839.1	ILMN_2648973	006280196	S	3713	AATGGGGTTGAAGGCTGGGGAGGAGGATCTACTGCTGTACAGCTAATAAA	8	+	108206753-108206802	8qD3	Mus musculus CCCTC-binding factor (Ctcf), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process involved in maintaining the methylation state of a nucleotide sequence [goid 10216] [evidence IMP]; Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence TAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IDA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IDA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AW108038	AW108038
Mus musculus	RefSeq	ILMN_258192	ILMN_258192	PROC	NM_001042767.1	NM_001042767.1		19123	112421030	NM_001042767.1	Proc	NP_001036232.1	ILMN_3109675	004210609	A	938	ATCCTCGTCCACCCTAACTACACCCGGAGCAGCAGTGACAACGACATTGC	18	-	32283361-32283410	18qB1	Mus musculus protein C (Proc), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of blood coagulation [goid 30195] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence NAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	PC	PC
Mus musculus	RefSeq	ILMN_188286	ILMN_188286	ZFP397	NM_027007.2	NM_027007.2		69256	113865965	NM_027007.2	Zfp397	NP_081283.2	ILMN_2451377	006560390	S	3456	GCTCTGGACGGTGAGACAAGGTTGAAGCATTCCTGGCCAATTGAAGCTAC	18	+	24121141-24121190	18qA2	Mus musculus zinc finger protein 397 (Zfp397), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	6720480F11Rik; 2810411K16Rik; AI461664	6720480F11Rik; 2810411K16Rik; AI461664
Mus musculus	RefSeq	ILMN_209838	ILMN_209838	H2-AB1	NM_207105.2	NM_207105.2		14961	144227216	NM_207105.2	H2-Ab1	NP_996988.1	ILMN_1226525	002570487	S	898	TCTCAGACTGTAAGACCTGAATGTCTCTGCTCCGAATTCCTGACTGCCAG	17	+	34404300-34404349	17qB1	Mus musculus histocompatibility 2, class II antigen A, beta 1 (H2-Ab1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; The process by which an antigen-presenting cell expresses peptide antigen in association with an MHC protein complex on its cell surface, including proteolysis and transport steps for the peptide antigen both prior to and following assembly with the MHC protein complex. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein [goid 48002] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IDA]	Rmcs1; I-A<b>; H2-Ab; AI845868; I-Abeta; IAb; Ia-2; Ia2; H-2Ab; Abeta	Rmcs1; I-A<b>; H2-Ab; AI845868; I-Abeta; IAb; Ia-2; Ia2; H-2Ab; Abeta
Mus musculus	RefSeq	ILMN_209838	ILMN_209838	H2-AB1	NM_207105.2	NM_207105.2		14961	144227216	NM_207105.2	H2-Ab1	NP_996988.1	ILMN_2631423	001440307	S	180	CCAGTTCATGGGCGAGTGCTACTTCACCAACGGGACGCAGCGCATACGAT	17	+	34400356-34400405	17qB1	Mus musculus histocompatibility 2, class II antigen A, beta 1 (H2-Ab1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; The process by which an antigen-presenting cell expresses peptide antigen in association with an MHC protein complex on its cell surface, including proteolysis and transport steps for the peptide antigen both prior to and following assembly with the MHC protein complex. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein [goid 48002] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IDA]	Rmcs1; I-A<b>; H2-Ab; AI845868; I-Abeta; IAb; Ia-2; Ia2; H-2Ab; Abeta	Rmcs1; I-A<b>; H2-Ab; AI845868; I-Abeta; IAb; Ia-2; Ia2; H-2Ab; Abeta
Mus musculus	RefSeq	ILMN_208846	ILMN_208846	CRISPLD2	NM_030209.2	NM_030209.2		78892	60592999	NM_030209.2	Crispld2	NP_084485.1	ILMN_1257551	003780102	S	2747	CTGGCTCCCATCACTTAGGAGCCTGGTCCAAACCCACTGTAAAATGAAGC	8	+	122575296-122575345	8qE1	Mus musculus cysteine-rich secretory protein LCCL domain containing 2 (Crispld2), mRNA.				Lcrisp2; MGC116029; 1810049K24Rik	Lcrisp2; MGC116029; 1810049K24Rik
Mus musculus	RefSeq	ILMN_221158	ILMN_221158	MLLT3	NM_029931.2	NM_029931.2		70122	114205403	NM_029931.2	Mllt3	NP_084207.2	ILMN_1256890	006940634	S	19	TGTAACAGCACTCAGTCCCTTCCTGACACTTGTGAGCCTGGCCACGTCTG	4	-	87452150-87452199	4qC4	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 (Mllt3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D4Ertd321e; 2610012I03Rik; 2210011H10Rik; Af9; 3830408D16Rik	D4Ertd321e; 2610012I03Rik; 2210011H10Rik; Af9; 3830408D16Rik
Mus musculus	RefSeq	ILMN_211842	ILMN_211842	CAPN2	NM_009794.1	NM_009794.1		12334	6753253	NM_009794.1	Capn2	NP_033924.1	ILMN_1219583	004390020	S	2011	CGATGTGGACAGGTCTGGAACCATGAATTCCTACGAGATGCGGAAAGCAC	1	-	184309208-184309257	1qH5	Mus musculus calpain 2 (Capn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	m-calpin; m-calpain; AI326419; Capa2; Capa-2	m-calpin; m-calpain; AI326419; Capa2; Capa-2
Mus musculus	RefSeq	ILMN_220432	ILMN_220432	RCL1	NM_021525.2	NM_021525.2		59028	31581584	NM_021525.2	Rcl1	NP_067500.1	ILMN_1237527	002710541	S	441	GCCTGGCTCCGTTTATGAAACACCCATTAAAAATCGTTCTGCGAGGAGTG	19	+	29192817-29192866	19qC1	Mus musculus RNA terminal phosphate cyclase-like 1 (Rcl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence ISA]	Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate [goid 3963] [evidence ISA]	AI789745; 2310040A02Rik; RPCL1; C76567; Rnac	AI789745; 2310040A02Rik; RPCL1; C76567; Rnac
Mus musculus	RefSeq	ILMN_220432	ILMN_220432	RCL1	NM_021525.2	NM_021525.2		59028	31581584	NM_021525.2	Rcl1	NP_067500.1	ILMN_1254929	000130553	S	1630	TGGGGCACTGGTTCCCTCTCTCGTCTTAGGAATAATTTGCTTGCATGGGC	19	+	29218160-29218209	19qC1	Mus musculus RNA terminal phosphate cyclase-like 1 (Rcl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence ISA]	Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate [goid 3963] [evidence ISA]	AI789745; 2310040A02Rik; RPCL1; C76567; Rnac	AI789745; 2310040A02Rik; RPCL1; C76567; Rnac
Mus musculus	RefSeq	ILMN_220432	ILMN_220432	RCL1	NM_021525.2	NM_021525.2		59028	31581584	NM_021525.2	Rcl1	NP_067500.1	ILMN_2966386	002370445	S	1695	CATGGTAACTTGTGTTTGTGTGGGCCTGGTGGTTGGGATGGGGAGGGCAG	19	+	29218225-29218274	19qC1	Mus musculus RNA terminal phosphate cyclase-like 1 (Rcl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence ISA]	Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate [goid 3963] [evidence ISA]	AI789745; 2310040A02Rik; RPCL1; C76567; Rnac	AI789745; 2310040A02Rik; RPCL1; C76567; Rnac
Mus musculus	RefSeq	ILMN_220435	ILMN_220435	AW551984	NM_178737.5	NM_178737.5		244810	146198873	NM_178737.5	AW551984	NP_848852.1	ILMN_1215599	001780152	S	3811	GACCCAGACCTTCTCCAAATTCAGCTAGCCCAAGACTTCTCCAATGTGAT				9qA5.1	Mus musculus expressed sequence AW551984 (AW551984), mRNA.		Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]		3222402N16	3222402N16
Mus musculus	RefSeq	ILMN_220435	ILMN_220435	AW551984	NM_178737.5	NM_178737.5		244810	146198873	NM_178737.5	AW551984	NP_848852.1	ILMN_2721980	003290328	S	2472	CGTGATCTGGCTGCATGCCAATGGCAAGGAATTGAAGGACGAGTGGGAGC				9qA5.1	Mus musculus expressed sequence AW551984 (AW551984), mRNA.		Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]		3222402N16	3222402N16
Mus musculus	RefSeq	ILMN_218162	ILMN_311385	LOC675440	XM_001479274.1	XM_001479274.1		675440	149249298	XM_001479274.1	LOC675440	XP_001479324.1	ILMN_1221126	001690110	S	328	CAGATTCCGGTTTGATGGGCAGCCAATCAACGAAACAGACACACCTGCAC	2	+	36244825-36244874	2qB	PREDICTED: Mus musculus similar to SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae), transcript variant 1 (LOC675440), mRNA.					
Mus musculus	RefSeq	ILMN_219904	ILMN_311385	LOC675440	XM_001479274.1	XM_001479274.1		675440	149249298	XM_001479274.1	LOC675440	XP_001479324.1	ILMN_2715025	000540270	S	881	TCATTGTAAAACCAAGGACAATTTTATAACTTTTTTGTACGTAGCTGTTA	2	+	36245378-36245427	2qB	PREDICTED: Mus musculus similar to SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae), transcript variant 1 (LOC675440), mRNA.					
Mus musculus	RefSeq	ILMN_199589	ILMN_199589	LOC383698	XM_357193.1	XM_357193.1			38074832	XM_357193.1	LOC383698		ILMN_1221786	001440086	S	190	CACCTGGACGTGAATGATGCCATTCTGGGAGGGCAAATGGGCTACAACGG										
Mus musculus	MEEBO	ILMN_221519	ILMN_221519	C230097I24RIK	scl51590.5.1_119	XM_283527.1			28524137	XM_283527.1	C230097I24Rik		ILMN_2736658	003780730	S	1195	GGACATGCTATAAGATAGCTGGATTTGACTAGGCCCTTAGGCAACTGTTT										
Mus musculus	MEEBO	ILMN_191152	ILMN_191152	NDP52	scl39674.7.1_330				51766388	XM_203409	Ndp52		ILMN_2542023	004890576	S	582	ACACAAAGTGGAAGAGAAGGCCTCCTGGGAGAAAGAGAAGGCCTCCTGGG										
Mus musculus	RefSeq	ILMN_210481	ILMN_210481	COL11A1	NM_007729.2	NM_007729.2		12814	124487345	NM_007729.2	Col11a1	NP_031755.2	ILMN_2606039	004560196	S	4215	CTGGTGCTGCAGGTCCTGCTGGTATTAAGGGGCCACCAGGTGATGATGGG	3	+	113888457-113888506	3qF3	Mus musculus collagen, type XI, alpha 1 (Col11a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IGI]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]	C530001D20Rik; cho	C530001D20Rik; cho
Mus musculus	RefSeq	ILMN_210481	ILMN_210481	COL11A1	NM_007729.2	NM_007729.2		12814	124487345	NM_007729.2	Col11a1	NP_031755.2	ILMN_1217703	006520184	S	1156	CGAGTATGACTATGAATATGGGGAGACAGACTATAAAGAGGCTGAGAGTG	3	+	113797455-113797504	3qF3	Mus musculus collagen, type XI, alpha 1 (Col11a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IGI]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]	C530001D20Rik; cho	C530001D20Rik; cho
Mus musculus	RefSeq	ILMN_210481	ILMN_210481	COL11A1	NM_007729.2	NM_007729.2		12814	124487345	NM_007729.2	Col11a1	NP_031755.2	ILMN_2776931	001170192	S	923	CCCCTCGATAGAAGTGAGAGATCGATAGTCGATACCAATGGAATCATGGT	3	+	113769406-113769455	3qF3	Mus musculus collagen, type XI, alpha 1 (Col11a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IGI]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]	C530001D20Rik; cho	C530001D20Rik; cho
Mus musculus	Riken	ILMN_201605	ILMN_201605	MBTPS1	ri|0610038M03|R000004D09|AK002809|850					AK002809	Mbtps1		ILMN_1254957	000780092	S	761	TCAGGCAGAAGGGCAGAGCAGGAATCTGCGACCTGGACCTGACCGGAGCT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IDA]	The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus [goid 42990] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213350	ILMN_213350	SMNDC1	NM_172429.2	NM_172429.2		76479	118130023	NM_172429.2	Smndc1	NP_766017.1	ILMN_2636192	000990398	S	1979	CTTGTACACAGAACTACAATGCTAAGGCTGGTAAATGGTTCACAGATCCT	19	-	53453800-53453849	19qD2	Mus musculus survival motor neuron domain containing 1 (Smndc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC106917; 4933440I19Rik; 2410004J23Rik	MGC106917; 4933440I19Rik; 2410004J23Rik
Mus musculus	RefSeq	ILMN_190786	ILMN_240590	PRKG1	NM_011160.2	NM_011160.2		19091	133893043	NM_011160.2	Prkg1	NP_035290.1	ILMN_2693295	001450519	S	2653	GTGGGTCGCAGAGTTCATGTCAAACCAGTGCTAGATGTTTCTGAGTTTCT	19	-	30643175-30643224	19qC1	Mus musculus protein kinase, cGMP-dependent, type I (Prkg1), transcript variant 2, mRNA.	An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]	Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cGMP [goid 4692] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IDA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]	MGC132849; CGKI; AW125416; Prkgr1b; Prkg1b	MGC132849; CGKI; AW125416; Prkgr1b; Prkg1b
Mus musculus	RefSeq	ILMN_246327	ILMN_246327	INMT	NM_009349.1	NM_009349.1		21743	6678280	NM_009349.1	Inmt	NP_033375.1	ILMN_2803249	002360050	S	708	CTGAAGTGCAACTGCGTCTCCCTCAGCTACTCGGAGGCTTACTGCTCCCA	6	-	55100470-55100519	6qB3	Mus musculus indolethylamine N-methyltransferase (Inmt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + an amine = S-adenosyl-L-homocysteine + a methylated amine [goid 30748] [evidence IEA]	Temt	Temt
Mus musculus	RefSeq	ILMN_240501	ILMN_240501	KCNJ6	NM_001025585.2	NM_001025585.2		16522	95006996	NM_001025585.2	Kcnj6	NP_001020756.1	ILMN_3038066	006400465	I	1702	ATGCCTGGTGCCTGTGGGGCCAGAAGAGGGCTCCAAAATCCCTAGAACTG	16	-	95053634-95053683	16qC4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 6 (Kcnj6), transcript variant Girk2B, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA];  [goid 15467] [evidence IDA]	KCNJ7; BIR1; KATP2; weaver; Kir3.2; wv; GIRK2	KCNJ7; BIR1; KATP2; weaver; Kir3.2; wv; GIRK2
Mus musculus	RefSeq	ILMN_202350	ILMN_240501	KCNJ6	NM_001025585.2	NM_001025585.2		16522	95006996	NM_001025585.2	Kcnj6	NP_001020756.1	ILMN_1257700	005690376	S	1485	GATGGGTTTCGCCCTGGGTTTTCTGTGAGAAATGCATTCAGACCCTCAGG	16	-	95053851-95053873:95053874-95053900	16qC4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 6 (Kcnj6), transcript variant Girk2B, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA];  [goid 15467] [evidence IDA]	KCNJ7; BIR1; KATP2; weaver; Kir3.2; wv; GIRK2	KCNJ7; BIR1; KATP2; weaver; Kir3.2; wv; GIRK2
Mus musculus	RefSeq	ILMN_240501	ILMN_240501	KCNJ6	NM_001025585.2	NM_001025585.2		16522	95006996	NM_001025585.2	Kcnj6	NP_001020756.1	ILMN_3112363	006840288	A	1311	TATCAACGTGGGGTACTACACAGGGGACGACCGGCTCTTTCTGGTGTCAC	16	-	95054025-95054074	16qC4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 6 (Kcnj6), transcript variant Girk2B, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA];  [goid 15467] [evidence IDA]	KCNJ7; BIR1; KATP2; weaver; Kir3.2; wv; GIRK2	KCNJ7; BIR1; KATP2; weaver; Kir3.2; wv; GIRK2
Mus musculus	MEEBO	ILMN_184415	ILMN_184415	DLL4	scl20424.11_450				9506546	NM_019454	Dll4		ILMN_1250828	002650110	S	3071	GGGTACAGGCCTCACTGGGGAGCTCAGGGCCTTCATGCTAAACTCCCAAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the migration of the endothelial cells of blood vessels [goid 43537] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [evidence IDA]		
Mus musculus	MEEBO	ILMN_184415	ILMN_184415	DLL4	scl20424.11_450				9506546	NM_019454	Dll4		ILMN_1249195	000110673	S	15	GGAATTTATTACTTCTTGGGTCCTATCTGTGTAATAGCAGAGTGGGGATC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the migration of the endothelial cells of blood vessels [goid 43537] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215057	ILMN_215057	RNF135	NM_028019.3	NM_028019.3		71956	146141202	NM_028019.3	Rnf135	NP_082295.1	ILMN_2655034	004490600	S	543	GGGGGAACATTCCTTGGATTCTCCAAAGCTGGTGACCTTCAGTATATCTC				11qB5	Mus musculus ring finger protein 135 (Rnf135), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC13061; 2410006N06Rik; 0610037N03Rik; RP23-345E8.1	MGC13061; 2410006N06Rik; 0610037N03Rik; RP23-345E8.1
Mus musculus	MEEBO	ILMN_220691	ILMN_220691	CD9	scl28399.6.24_1	NM_007657.2			31982463	NM_007657.2	Cd9		ILMN_2725414	003990674	S	567	ACTGCTGTGGCATAGCTGGTCCTTTGGAGCAGTTTATCTCGGACACCTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Formation of the junction between an axon and the glial cell that forms the myelin sheath. Paranodal junctions form at each paranode, i.e. at the ends of the unmyelinated nodes of Ranvier [goid 30913] [evidence IDA]; The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220320	ILMN_220320	OLFR347	NM_146943.1	NM_146943.1		258945	22129026	NM_146943.1	Olfr347	NP_667154.1	ILMN_1242663	006330397	S	581	CCAACAAGCTGGTTATACTTCTTTTAGGTAATGTGATCATTACCCTGCCA	2	+	36590423-36590472	2qB	Mus musculus olfactory receptor 347 (Olfr347), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR136-9	MOR136-9
Mus musculus	RefSeq	ILMN_188843	ILMN_261228	RSRC2	NM_001005523.1	NM_001005523.1		208606	53988373	NM_001005523.1	Rsrc2	NP_001005523.1	ILMN_2456241	002060008	S	140	CGGAGAGGCAGAACATGTTTTGCTGTACCTCTGTGCCAAGGGGATATTTT	5	-	124195533-124195582	5qF	Mus musculus arginine/serine-rich coiled-coil 2 (Rsrc2), transcript variant 3, mRNA.				1500011J06Rik	1500011J06Rik
Mus musculus	RefSeq	ILMN_218221	ILMN_261228	RSRC2	NM_001005523.1	NM_001005523.1		208606	53988373	NM_001005523.1	Rsrc2	NP_001005523.1	ILMN_1227647	002450369	S	835	TCAGAACTCGTTCCCGATCCAGATCCAGACACAGGCATAGGACTAGAAGC	5	-	124189526-124189575	5qF	Mus musculus arginine/serine-rich coiled-coil 2 (Rsrc2), transcript variant 3, mRNA.				1500011J06Rik	1500011J06Rik
Mus musculus	Riken	ILMN_202246	ILMN_202246	4930435M24RIK	ri|4930435M24|PX00031N17|AK015327|1290					AK015327	4930435M24Rik		ILMN_1246414	001410072	S	932	GGTAGCTGCAGCTTTGTGGGACCAGGCGTTATACAAGCTTTACAGTGCAG										
Mus musculus	RefSeq	ILMN_211083	ILMN_313854	LOC383196	XM_001474081.1	XM_001474081.1		383196	149268272	XM_001474081.1	LOC383196	XP_001474131.1	ILMN_2612346	006110220	S	30	TCTTCTCCTCTGTGTCTCTGATTCTAGGGCAGAAACAACTGTGACCCAGT	17	+	3041834-3041853:3042002-3042031	17qA1	PREDICTED: Mus musculus hypothetical LOC383196 (LOC383196), mRNA.					
Mus musculus	RefSeq	ILMN_211083	ILMN_313854	LOC383196	XM_001474081.1	XM_001474081.1		383196	149268272	XM_001474081.1	LOC383196	XP_001474131.1	ILMN_1250188	005870358	S	34	CTCCTCTGTGTCTCTGATTCTAGGGCAGAAACAACTGTGACCCAGTCTCC	17	+	3041838-3041853:3042002-3042035	17qA1	PREDICTED: Mus musculus hypothetical LOC383196 (LOC383196), mRNA.					
Mus musculus	RefSeq	ILMN_211168	ILMN_211168	NPAS3	NM_013780.2	NM_013780.2		27386	154090946	NM_013780.2	Npas3	NP_038808.2	ILMN_1233029	005900008	S	2710	ACGCTGCCCTTCCCAGTCTACAGCAACGGTATCCACGCGGCACAGACTCT				12qC1	Mus musculus neuronal PAS domain protein 3 (Npas3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Female behaviors associated with the care and rearing of offspring [goid 42711] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	4930423H22Rik	4930423H22Rik
Mus musculus	RefSeq	ILMN_211168	ILMN_211168	NPAS3	NM_013780.2	NM_013780.2		27386	154090946	NM_013780.2	Npas3	NP_038808.2	ILMN_2744737	003360326	S	89	CTCTGCCCAACCAATCAGAATGTAGGAAAATCTACAGATATGACGGAATC				12qC1	Mus musculus neuronal PAS domain protein 3 (Npas3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Female behaviors associated with the care and rearing of offspring [goid 42711] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	4930423H22Rik	4930423H22Rik
Mus musculus	RefSeq	ILMN_191781	ILMN_211168	NPAS3	NM_013780.2	NM_013780.2		27386	154090946	NM_013780.2	Npas3	NP_038808.2	ILMN_2482116	001230168	S	5586	TGTAGAGTTGGTAACACTGCTAAGGTTTTTACGAACAGAAAGATCCCTTT				12qC1	Mus musculus neuronal PAS domain protein 3 (Npas3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Female behaviors associated with the care and rearing of offspring [goid 42711] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	4930423H22Rik	4930423H22Rik
Mus musculus	RefSeq	ILMN_213925	ILMN_213925	CEACAM13	NM_027210.2	NM_027210.2		69785	142352676	NM_027210.2	Ceacam13	NP_081486.1	ILMN_2642321	004120215	S	882	CAAGGAAGAAGATGTAAACCATGGCCCTTGAAGAATCAAAGAAGAAAGGC	7	+	18604456-18604505	7qA2	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 13 (Ceacam13), mRNA.				1600025J19Rik; 1600012K03Rik; MGC117613	1600025J19Rik; 1600012K03Rik; MGC117613
Mus musculus	RefSeq	ILMN_209072	ILMN_213925	CEACAM13	NM_027210.2	NM_027210.2		69785	142352676	NM_027210.2	Ceacam13	NP_081486.1	ILMN_2592257	005560162	S	761	CAATGTCAAGAAGAAAGACGCAGGGCTTTATACCCTACGAACCGTATCTG	7	+	18598661-18598710	7qA2	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 13 (Ceacam13), mRNA.				1600025J19Rik; 1600012K03Rik; MGC117613	1600025J19Rik; 1600012K03Rik; MGC117613
Mus musculus	RefSeq	ILMN_222382	ILMN_222382	OLFR1132	NM_146836.1	NM_146836.1		258833	22129190	NM_146836.1	Olfr1132	NP_667047.1	ILMN_2748817	001170162	S	794	CCTACTCTCTAGATCAAGACAAAATGACCTCACTCTTCTACACCCTGGTG	2	-	87475059-87475108	2qD	Mus musculus olfactory receptor 1132 (Olfr1132), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR177-1	MOR177-1
Mus musculus	RefSeq	ILMN_235098	ILMN_235098	SEMA6D	NM_199238.1	NM_199238.1		214968	40385874	NM_199238.1	Sema6d	NP_954708.1	ILMN_3103992	006580327	A	2804	ACTATATTCAGGGGACACCGGTGAGTGTTCATCTGCAGCCCTCCCTCTCC	2	+	124490852-124490901	2qF1	Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D (Sema6d), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Sema6D-6; Sema6D-5; Sema6D-2; 1110067B02Rik; AA409156; Sema6D-4; D330011G23; Sema6D-1; mKIAA1479	Sema6D-6; Sema6D-5; Sema6D-2; 1110067B02Rik; AA409156; Sema6D-4; D330011G23; Sema6D-1; mKIAA1479
Mus musculus	RefSeq	ILMN_203840	ILMN_310171	0610007N19RIK	XM_001475444.1	XM_001475444.1		66835	149266519	XM_001475444.1	0610007N19Rik	XP_001475494.1	ILMN_1242440	002000424	S	504	CTGCCTCGACTTCCCTCGTAGTACACTGAAGAGGACCCTTGGAGCAGCTC				15qB3.1	PREDICTED: Mus musculus RIKEN cDNA 0610007N19 gene (0610007N19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188213	ILMN_310171	0610007N19RIK	XM_001475444.1	XM_001475444.1		66835	149266519	XM_001475444.1	0610007N19Rik	XP_001475494.1	ILMN_1233188	003850678	S	1776	GATGGTTGACATAGACTGATCTACCTTCACCCACCCCAAGTGAGTTCTGC				15qB3.1	PREDICTED: Mus musculus RIKEN cDNA 0610007N19 gene (0610007N19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_190110	ILMN_231650	AVPR1B	NM_011924.2	NM_011924.2		26361	61675709	NM_011924.2	Avpr1b	NP_036054.1	ILMN_2667432	004200538	S	1535	GGGACGAGAATGCCCCTAATGAAGATTCTACCAATGTGGCTTTCACCATC	1	+	133497225-133497248:133505988-133506013	1qE4	Mus musculus arginine vasopressin receptor 1B (Avpr1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The regulation of blood pressure mediated by the signaling molecule vasopressin. Vasopressin is produced in the hypothalamus, and affects vasoconstriction, and renal water transport [goid 1992] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]	VIBR; VPR3; V3/V1b; AVPR3	VIBR; VPR3; V3/V1b; AVPR3
Mus musculus	RefSeq	ILMN_193091	ILMN_235356	EHD4	NM_133838.4	NM_133838.4		98878	146149325	NM_133838.4	Ehd4	NP_598599.2	ILMN_1224768	004210192	S	3275	GTGTCAGTGTCCATGGAGAGGTGATGCCTGGGAGGTCTTGACTTTCCTCC				2qE5	Mus musculus EH-domain containing 4 (Ehd4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2210022F10Rik; AV006278; AI846352; Past2; AI197390	2210022F10Rik; AV006278; AI846352; Past2; AI197390
Mus musculus	RefSeq	ILMN_212689	ILMN_212689	OLFR109	NM_146835.1	NM_146835.1		258832	22129188	NM_146835.1	Olfr109	NP_667046.1	ILMN_2629227	005080577	S	762	TGGTTTCACATACATCCGCCCTGCCACAGCATCAGCCTCCTCCATGAGTG	17	+	37603914-37603963	17qB1	Mus musculus olfactory receptor 109 (Olfr109), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR250-1	MOR250-1
Mus musculus	Riken	ILMN_205887	ILMN_205887	A430034C19RIK	ri|A430034C19|PX00134L12|AK039937|980					AK039937	A430034C19Rik		ILMN_1225310	006220537	S	196	CCATGCCTACCCCACCGTGCCAATCTTCTGGGAAACGAAAGGGGAGAAAG										
Mus musculus	RefSeq	ILMN_218220	ILMN_218220	ZC3H11A	NM_144530.5	NM_144530.5		70579	124378001	NM_144530.5	Zc3h11a	NP_653113.4	ILMN_1254632	003940332	S	1796	GCTCCGCATCACCAAGAGAGCAGGTGTAAAAGAAGAGAAAAAATGTGGCC	1	-	135522480-135522507:135523344-135523365	1qE4	Mus musculus zinc finger CCCH type containing 11A (Zc3h11a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mKIAA0663; G630041M05Rik; 5730454B08Rik; 1110003F06Rik; KIAA0663; Zc3hdc11a	mKIAA0663; G630041M05Rik; 5730454B08Rik; 1110003F06Rik; KIAA0663; Zc3hdc11a
Mus musculus	MEEBO	ILMN_218518	ILMN_218518	STK10	scl020868.20_22	NM_009288.1			6678162	NM_009288.1	Stk10		ILMN_1214907	006020047	S	1661	GCACAATAAGACCCTGAAACGGACCCGCCGGTTTGTGGTGGATGGTGTGG							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence TAS]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208633	ILMN_208633	BTBD12	NM_177472.4	NM_177472.4		52864	118130426	NM_177472.4	Btbd12	NP_803423.2	ILMN_2651526	002510068	S	5587	AGTTTGGGTTTTCACAGCCTGTGAGTGTCCTTGTGTGTTTTAAATACAGT	16	-	3979195-3979244	16qA1	Mus musculus BTB (POZ) domain containing 12 (Btbd12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI426760; D16Bwg1016e; AI256635	AI426760; D16Bwg1016e; AI256635
Mus musculus	RefSeq	ILMN_214453	ILMN_256014	OLFR747	NM_207156.2	NM_207156.2		258264	112982847	NM_207156.2	Olfr747	NP_997039.2	ILMN_1232300	001260196	S	509	CCCTTCTGTGGTTCTAATATCATTGATCACTTCCTCTGTGACATGGACCC	14	-	51300762-51300811	14qC1	Mus musculus olfactory receptor 747 (Olfr747), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR106-16; MOR106-7	MOR106-16; MOR106-7
Mus musculus	RefSeq	ILMN_211882	ILMN_255560	PARN	NM_028761.3	NM_028761.3		74108	146141218	NM_028761.3	Parn	NP_083037.1	ILMN_2620390	007160184	S	2166	CTAAACTGACCTTTGGCACACGTCGTGGTTGAGGGCTTCTGCAAGCGTGT				16qA1	Mus musculus poly(A)-specific ribonuclease (deadenylation nuclease) (Parn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP [goid 4535] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1200003I18Rik; DAN	1200003I18Rik; DAN
Mus musculus	RefSeq	ILMN_199687	ILMN_199687	LOC382888	XM_356733.1	XM_356733.1			38076112	XM_356733.1	LOC382888		ILMN_2536119	007000152	S	528	AACTCTAGGACTTCTCATCAACTCAGAAGGGCCATATTGCCGCCGCCCCG										
Mus musculus	MEEBO	ILMN_220142	ILMN_220142	ADAM15	scl21941.24.1_72	NM_009614.1			6752961	NM_009614.1	Adam15		ILMN_2718144	005290392	S	2666	AATACCTGGGGACGCACTAAAATAGCTGCAGCGGGATGCTGGGGAGGGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194602	ILMN_194602	DDX27	scl19891.17.1_25				23346462	NM_153065	Ddx27		ILMN_2634582	001050193	S	1790	AGTAACACACAAAAAACAGTATTATTTTGGACAGGAGAGATGGCTCTGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189155	ILMN_189155	0610006L08RIK	scl31173.6_20						0610006L08Rik		ILMN_2458837	002070673	S	5	GGAAGCCCCGCTTCTTCAGCATAACACACGAGCTCTCAGATCTTCCAATG										
Mus musculus	RefSeq	ILMN_216608	ILMN_216608	FOXE1	NM_183298.1	NM_183298.1		110805	34304110	NM_183298.1	Foxe1	NP_899121.1	ILMN_3163279	002260040	A	1067	ACGCCACCGCCTACCCCGGCGCGGTGGATCGGTTCGTGTCTGCCATGTGA	4	+	46358132-46358181	4qB1	Mus musculus forkhead box E1 (Foxe1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48562] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The formation of either of the compounds secreted by the thyroid gland, mainly thyroxine and triiodothyronine. This is achieved by the iodination and joining of tyrosine molecules to form the precursor thyroglobin, proteolysis of this precursor gives rise to the thyroid hormones [goid 6590] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISO]	Titf2	Titf2
Mus musculus	Riken	ILMN_204829	ILMN_204829	C630012A10RIK	ri|C630012A10|PX00083N22|AK049927|1796					AK049927	C630012A10Rik		ILMN_1245862	003360367	S	1667	CATACTTTGCAACCCCCCCAAGCGTTTTCTGACCTCCACAATTGATCACC										
Mus musculus	RefSeq	ILMN_217002	ILMN_231722	DMRTC1C	XM_904802.2	XM_904802.2		71083	94410577	XM_904802.2	Dmrtc1c	XP_909895.3	ILMN_2677947	006130176	S	1527	CCAGGCACCCCTGTACTTGTATGTGGAGAAGTTTCAACTTGTGTCTAGGC				XqD	PREDICTED: Mus musculus DMRT-like family C1c (Dmrtc1c), mRNA.					
Mus musculus	RefSeq	ILMN_252595	ILMN_252595	GRXCR1	NM_001018019.1	NM_001018019.1		433899	65301144	NM_001018019.1	Grxcr1	NP_001018019.1	ILMN_2791392	003780681	S	598	CTCTAAACGGTGACTATGGGAAAGAGTTGGATGAACGGTGCAGGAGAGTC	5	+	68501693-68501742	5qC3.1	Mus musculus glutaredoxin, cysteine rich 1 (Grxcr1), mRNA.		Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	Grxcr1	Grxcr1
Mus musculus	RefSeq	ILMN_221482	ILMN_223692	REXO4	NM_207234.2	NM_207234.2		227656	76563951	NM_207234.2	Rexo4	NP_997117.2	ILMN_2736209	000010093	S	1327	CCCCAGCTGCCACTCCACAGCACCGCATCAAGAACTCTTAGCACCATCCT	2	-	26809987-26809996:26809997-26810036	2qA3	Mus musculus REX4, RNA exonuclease 4 homolog (S. cerevisiae) (Rexo4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]	Xpmc2h; Gm111	Xpmc2h; Gm111
Mus musculus	RefSeq	ILMN_213983	ILMN_213983	CYP2D26	NM_029562.2	NM_029562.2		76279	142355089	NM_029562.2	Cyp2d26	NP_083838.1	ILMN_2642975	002120035	S	365	GAGAGGACACTTCTGACCGCCCCCTAATGCCCATCTATAATCACATAGGC	15	-	82623574-82623623	15qE1	Mus musculus cytochrome P450, family 2, subfamily d, polypeptide 26 (Cyp2d26), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	1300006E06Rik	1300006E06Rik
Mus musculus	RefSeq	ILMN_213983	ILMN_213983	CYP2D26	NM_029562.2	NM_029562.2		76279	142355089	NM_029562.2	Cyp2d26	NP_083838.1	ILMN_2704777	000940736	S	1175	GCTTTGCAGACATCGTCCCAACAAATTTACCACATATGACATCCCGAGAC	15	-	82621429-82621478	15qE1	Mus musculus cytochrome P450, family 2, subfamily d, polypeptide 26 (Cyp2d26), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	1300006E06Rik	1300006E06Rik
Mus musculus	RefSeq	ILMN_204972	ILMN_312506	LOC100046025	XM_001475823.1	XM_001475823.1		100046025	149255993	XM_001475823.1	LOC100046025	XP_001475873.1	ILMN_1223496	004900475	S	3856	GGGTATTACCACATCAACTTGAAGCCTTTGGATGCACTCATATCCCCATC					PREDICTED: Mus musculus similar to mKIAA1230 protein, transcript variant 1 (LOC100046025), mRNA.					
Mus musculus	RefSeq	ILMN_221953	ILMN_312506	LOC100046025	XM_001475823.1	XM_001475823.1		100046025	149255993	XM_001475823.1	LOC100046025	XP_001475873.1	ILMN_1220307	006350451	S	4337	CTGGGGGACAGGTGGACAGGTCACTTTACAGTGATAGATCTGGTGATAGC					PREDICTED: Mus musculus similar to mKIAA1230 protein, transcript variant 1 (LOC100046025), mRNA.					
Mus musculus	RefSeq	ILMN_216728	ILMN_216728	COMMD8	NM_178599.4	NM_178599.4		27784	146198652	NM_178599.4	Commd8	NP_848714.1	ILMN_2674548	004200129	S	3242	GTGCTCTGACAGTTCCTTTCTAAATGCAAGGCCTTCGGATACTCCGTTCC				5qC3.2	Mus musculus COMM domain containing 8 (Commd8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC106259; D5Buc26e; C77770	MGC106259; D5Buc26e; C77770
Mus musculus	RefSeq	ILMN_216064	ILMN_216064	KCTD18	NM_030211.2	NM_030211.2		51960	142345025	NM_030211.2	Kctd18	NP_084487.1	ILMN_1258642	003420373	S	276	CCGTGATGGACATCTATTCAAATACATTTTGGACTACCTGCACGGGGAGG	1	-	58022318-58022367	1qC1.3	Mus musculus potassium channel tetramerisation domain containing 18 (Kctd18), mRNA.				6530404F10Rik; 4932411A20Rik	6530404F10Rik; 4932411A20Rik
Mus musculus	RefSeq	ILMN_194062	ILMN_235865	PRTG	NM_175485.4	NM_175485.4		235472	153945725	NM_175485.4	Prtg	NP_780694.3	ILMN_2748795	001170255	S	4433	CTGCAAAACCACCTTTCCCTTTGCTCCACAGCCGGCCAAGGGCTGCGCTG				9qD	Mus musculus protogenin homolog (Gallus gallus) (Prtg), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		A230098A12Rik	A230098A12Rik
Mus musculus	Riken	ILMN_205852	ILMN_205852	A730031E08RIK	ri|A730031E08|PX00150O04|AK042854|3166					AK042854	A730031E08Rik		ILMN_1230309	001440598	S	2835	AGCCAGGTGTTTACGTCTGTGACTTGGCTAGGTGCCCTCTTCCCATGACA										
Mus musculus	MEEBO	ILMN_184956	ILMN_184956	SYNPO	scl51376.2_283						Synpo		ILMN_2422982	005670634	S	3	CCACAGCTTGCCTGTATCCTGCCTTGTGCCTCTTGTAGAATTCAGAGCAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence ISO]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence NAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30865] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]		
Mus musculus	RefSeq	ILMN_219738	ILMN_219738	PCDHB20	NM_053145.2	NM_053145.2		93891	89994746	NM_053145.2	Pcdhb20	NP_444375.2	ILMN_2979449	001990114	S	2874	GTCCATAAGCAGGCAGCCCCGGATGGATCTACAACAAAAGACATGGAGGG	18	+	37666791-37666840	18qB3	Mus musculus protocadherin beta 20 (Pcdhb20), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcdhb14; PcdhbT	Pcdhb14; PcdhbT
Mus musculus	RefSeq	ILMN_226537	ILMN_226537	KIF5A	NM_001039000.1	NM_001039000.1		16572	84781726	NM_001039000.1	Kif5a	NP_001034089.1	ILMN_3143833	003390692	A	3167	TATCAACGACAACAGGAGTGACCTGCCGTGTGGCTATGAGGCTGAGGACC	10	-	126632769-126632805:126633098-126633110	10qD3	Mus musculus kinesin family member 5A (Kif5a), transcript variant 2, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence TAS]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence TAS]	Kns; D10Bwg0738e; mKIAA4086; KIAA4086; Kif5	Kns; D10Bwg0738e; mKIAA4086; KIAA4086; Kif5
Mus musculus	RefSeq	ILMN_226537	ILMN_226537	KIF5A	NM_001039000.1	NM_001039000.1		16572	84781726	NM_001039000.1	Kif5a	NP_001034089.1	ILMN_3065852	005490131	I	5738	TGGCCAGCCTTCCCTCCTCGGCAAGATGTAAGGGACACGGCCATTTGCTA	10	-	126628875-126628924	10qD3	Mus musculus kinesin family member 5A (Kif5a), transcript variant 2, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence TAS]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence TAS]	Kns; D10Bwg0738e; mKIAA4086; KIAA4086; Kif5	Kns; D10Bwg0738e; mKIAA4086; KIAA4086; Kif5
Mus musculus	RefSeq	ILMN_187032	ILMN_230085	ST3GAL6	NM_018784.2	NM_018784.2		54613	118130739	NM_018784.2	St3gal6	NP_061254.1	ILMN_2695199	004150670	S	1351	GCCCCAACAGTCCTTTACACTACTACGGGAATGCCACCATGTCTTTGATG	16	-	58472429-58472478	16qC1.2	Mus musculus ST3 beta-galactoside alpha-2,3-sialyltransferase 6 (St3gal6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence ISO]	St3galVI; AW552396; AI930218; 1700023B24Rik; Siat10	St3galVI; AW552396; AI930218; 1700023B24Rik; Siat10
Mus musculus	RefSeq	ILMN_232661	ILMN_232661	ADCY5	NM_001012765.2	NM_001012765.2		224129	84370218	NM_001012765.2	Adcy5	NP_001012783.2	ILMN_3075672	000670286	I	253	GTAGTGGTTCTGCGCTCGGCTACGGTGGGCCAGCCGCCGGCAACGAGGAA	16	+	35074876-35074925	16qB3	Mus musculus adenylate cyclase 5 (Adcy5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [evidence IGI]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The series of molecular signals generated as a consequence of an adenosine receptor binding to one of its physiological ligands [goid 1973] [evidence IGI]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AW121902; Ac5	AW121902; Ac5
Mus musculus	RefSeq	ILMN_199183	ILMN_199183	LOC276878	XM_205705.2	XM_205705.2			38091634	XM_205705.2	LOC276878		ILMN_1252170	006770368	S	936	GCTGATGGTACCTGCAGGCTGCTCACATGTCATGCCTGATAGCATGATGC										
Mus musculus	RefSeq	ILMN_211277	ILMN_243794	CASC4	NM_199038.2	NM_199038.2		319996	141803515	NM_199038.2	Casc4	NP_950239.1	ILMN_1246107	004050167	S	3114	GTTGGTTCCTCTGTTATAAAAGCAGTCACTTGATTTTATGGTACCTATCT	2	+	121761282-121761331	2qE5	Mus musculus cancer susceptibility candidate 4 (Casc4), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			VGFG2573; D130060C09Rik	VGFG2573; D130060C09Rik
Mus musculus	RefSeq	ILMN_241347	ILMN_241347	GM1661	NM_001033774.1	NM_001033774.1		381544	85702082	NM_001033774.1	Gm1661	NP_001028946.1	ILMN_2955129	002940142	S	1065	GATAAAGGACCTGATCCACTACGACGTGCGCTTGCCTCTGCTCAAGGGCC	4	-	116713432-116713481	4qD1	Mus musculus gene model 1661, (NCBI) (Gm1661), mRNA.				Gm1662	Gm1662
Mus musculus	MEEBO	ILMN_184617	ILMN_184617	2610103J23RIK	scl48004.13_40				31982232	NM_026002	2610103J23Rik		ILMN_2701562	004050474	S	2357	GAGGCCAGTAGGCAAGTCCTTGGATCTTATGCACGACCTTAGACCATTTG										
Mus musculus	MEEBO	ILMN_184617	ILMN_184617	2610103J23RIK	scl48004.13_40				31982232	NM_026002	2610103J23Rik		ILMN_2420119	004230376	S	2	CGTGGCCATGTCAGAGTTCTCCAACTGCATTATACCTATACCCTAAATTG										
Mus musculus	Riken	ILMN_205739	ILMN_205739	A330089M16RIK	ri|A330089M16|PX00133C22|AK039696|1385					AK039696	A330089M16Rik		ILMN_2574865	001570224	S	965	GGTCCTGGGGGAATTGTTGAGACAGGCTTAACCAGGAGTTTTGGGGAGGA										
Mus musculus	RefSeq	ILMN_204257	ILMN_258543	PPP1R3E	XM_993154.1	XM_993154.1		105651	94397162	XM_993154.1	Ppp1r3e	XP_998248.1	ILMN_1249922	005720286	S	3666	CCTCGTCTCTCAGCAGTTCGTGGCTTCAGTCTTCAAGGACAGGGGTTGCC	14	-	55494714-55494763	14qC3	PREDICTED: Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 3E (Ppp1r3e), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]			
Mus musculus	RefSeq	ILMN_220413	ILMN_317487	LOC100041585	XM_001476532.1	XM_001476532.1		100041585	149260721	XM_001476532.1	LOC100041585	XP_001476582.1	ILMN_1249590	004610059	S	3020	GCATAGGTTTGTGTGGAACAAAGCCTAGAACAACTGTAGGTAAACTAGTG	10	-	35428629-35428678	10qB1	PREDICTED: Mus musculus similar to S-adenosylmethionine decarboxylase (LOC100041585), mRNA.					
Mus musculus	Riken	ILMN_207032	ILMN_207032	C330034C07RIK	ri|C330034C07|PX00667D15|AK082825|770					AK082825	C330034C07Rik		ILMN_2584527	006330129	S	633	CTTTTGCTTTTGTTTTGTATGTTGCCGCAAACCTTGCACGTAGCAGCCTG										
Mus musculus	RefSeq	ILMN_214478	ILMN_214478	5730427N09RIK	NM_021552.4	NM_021552.4		59050	148540167	NM_021552.4	5730427N09Rik	NP_067527.3	ILMN_2648386	005900484	S	917	TGCTGGTCTGACAGTGACGTCACTCATACACGTCATTCCACTCACTGCTG				13qD1	Mus musculus RIKEN cDNA 5730427N09 gene (5730427N09Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		LNR42; Yr29; Nsa2p; MGC118054	LNR42; Yr29; Nsa2p; MGC118054
Mus musculus	RefSeq	ILMN_220030	ILMN_220030	GPR182	NM_007412.2	NM_007412.2		11536	117606338	NM_007412.2	Gpr182	NP_031438.2	ILMN_2765378	006330088	S	1349	CGTTCAGGCGTCCTCTCCGCCTCCAAACACCTCACCTACACTCTGCAATT	10	-	127186953-127187002	10qD3	Mus musculus G protein-coupled receptor 182 (Gpr182), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpcr22; MB10; Gpcr17; NOW; AM-R; G10-D	Gpcr22; MB10; Gpcr17; NOW; AM-R; G10-D
Mus musculus	RefSeq	ILMN_220030	ILMN_220030	GPR182	NM_007412.2	NM_007412.2		11536	117606338	NM_007412.2	Gpr182	NP_031438.2	ILMN_1213615	005690670	S	1584	AGTACACTATTTGTTTGGGTACTGATGTCTAAGGGAGCCACACCGGTGGG	10	-	127186718-127186767	10qD3	Mus musculus G protein-coupled receptor 182 (Gpr182), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpcr22; MB10; Gpcr17; NOW; AM-R; G10-D	Gpcr22; MB10; Gpcr17; NOW; AM-R; G10-D
Mus musculus	RefSeq	ILMN_222465	ILMN_222465	5033411D12RIK	NM_138654.2	NM_138654.2		192136	34328351	NM_138654.2	5033411D12Rik	NP_619595.2	ILMN_2749935	005310739	S	1027	TGAAGGAAGTGGGATCCCATATGGACCAATCAACAGCCTGAAGGATGTGT	13	-	17344338-17344387	13qA2	Mus musculus RIKEN cDNA 5033411D12 gene (5033411D12Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5033411D12Rik; D17907	5033411D12Rik; D17907
Mus musculus	RefSeq	ILMN_188588	ILMN_188588	TRAF1	NM_009421.3	NM_009421.3		22029	88900511	NM_009421.3	Traf1	NP_033447.2	ILMN_1230586	003850463	S	2084	CTCTCGAGGTCAGGGCATAACTGGAAAAATGCCCCCATCTCTCTGTTCAG	2	-	34798969-34799018	2qB	Mus musculus Tnf receptor-associated factor 1 (Traf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4732496E14Rik	4732496E14Rik
Mus musculus	Riken	ILMN_206813	ILMN_206813	HPS3	ri|D930010E08|PX00200P14|AK086167|2299					AK086167	Hps3		ILMN_1230925	002450703	S	2027	GAACTGCGATGGTTTGGGTACTTGTTGTTTGTTAGCGTCAGGGAGGGGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]			
Mus musculus	Riken	ILMN_205784	ILMN_205784	D230019K24RIK	ri|D230019K24|PX00188K22|AK051923|4712					AK051923	D230019K24Rik		ILMN_1225591	003460730	S	3647	GAGCACTGGCATAAAGGCATGCACCCCGTCTGGTCCAATGTGTGAGGATC										
Mus musculus	RefSeq	ILMN_213546	ILMN_213546	TCL1	NM_009337.2	NM_009337.2		21432	31981970	NM_009337.2	Tcl1	NP_033363.1	ILMN_2985612	001990484	S	1263	CCCAGGGAAGCCTTGGTCTCCTAGTAAGAATGTTGAAAGGGAATGTGTGG	12	-	106455019-106455068	12qE	Mus musculus T-cell lymphoma breakpoint 1 (Tcl1), mRNA.	The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]			
Mus musculus	RefSeq	ILMN_213546	ILMN_213546	TCL1	NM_009337.2	NM_009337.2		21432	31981970	NM_009337.2	Tcl1	NP_033363.1	ILMN_2638171	002680438	S	813	CCATGAGGGACAAGACCTCGTCATTGGAATCTGGCCAGGCCCCAGATCAG	12	-	106455469-106455518	12qE	Mus musculus T-cell lymphoma breakpoint 1 (Tcl1), mRNA.	The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]			
Mus musculus	RefSeq	ILMN_212710	ILMN_212710	TFPT	NM_023524.1	NM_023524.1		69714	13122605	NM_023524.1	Tfpt	NP_076013.1	ILMN_2877706	002450411	S	740	GGCAGCCAAGGCACAGATGTCCCTACCCCAGGCAATGCTGAGAATGAACC	7	-	3572529-3572578	7qA1	Mus musculus TCF3 (E2A) fusion partner (Tfpt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]	2400004F01Rik; FB1; Amida; AI450389	2400004F01Rik; FB1; Amida; AI450389
Mus musculus	RefSeq	ILMN_212710	ILMN_212710	TFPT	NM_023524.1	NM_023524.1		69714	13122605	NM_023524.1	Tfpt	NP_076013.1	ILMN_1217000	005420259	S	599	GAGCGAGTCTTGAACAGGCTCCATCAGGTGCAAAGGATAACTCGGAGACT	7	-	3576215-3576264	7qA1	Mus musculus TCF3 (E2A) fusion partner (Tfpt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]	2400004F01Rik; FB1; Amida; AI450389	2400004F01Rik; FB1; Amida; AI450389
Mus musculus	RefSeq	ILMN_212710	ILMN_212710	TFPT	NM_023524.1	NM_023524.1		69714	13122605	NM_023524.1	Tfpt	NP_076013.1	ILMN_1222401	000240538	S	961	TGGCTTTGAAGCAGATGAGGCCTTGGATTCAAGTTGGGTTTCCCGAGAGC	7	-	3572006-3572055	7qA1	Mus musculus TCF3 (E2A) fusion partner (Tfpt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]	2400004F01Rik; FB1; Amida; AI450389	2400004F01Rik; FB1; Amida; AI450389
Mus musculus	Riken	ILMN_204302	ILMN_204302	A830097B02RIK	ri|A830097B02|PX00156P13|AK044167|2388					AK044167	A830097B02Rik		ILMN_2563934	000110070	S	2084	TCGCTACAGAAGCTGAGAAGCGAGATGGGGCATGGACCAATCCAGTGGGC										
Mus musculus	RefSeq	ILMN_229959	ILMN_229959	AP1G1	NM_009677.3	NM_009677.3		11765	56744241	NM_009677.3	Ap1g1	NP_033807.2	ILMN_3071104	007000133	I	3690	AGACTCTGTCACAAAACACCGTGGCCCATAGGAAGAGCAGACCCAGACTC	8	+	112385051-112385100	8qD3	Mus musculus adaptor protein complex AP-1, gamma 1 subunit (Ap1g1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes [goid 30136] [evidence ISO]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU041323; D8Ertd374e; Adtg; AW551707; AA409002	AU041323; D8Ertd374e; Adtg; AW551707; AA409002
Mus musculus	MEEBO	ILMN_209502	ILMN_209502	COPG	scl29780.26_164	NM_017477.1			8567337	NM_017477.1	Copg		ILMN_2596412	004180025	S	3603	CTATGGCCTATTTCATGACTGGTCCTGGCTCCACCATGTACTTGGTCAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212625	ILMN_212625	PGM1	NM_025700.2	NM_025700.2		66681	118130267	NM_025700.2	Pgm1	NP_079976.1	ILMN_2628578	005870397	S	1945	CTTGATTGTTAAAGCAATAATATTTTAGGGCCAAGTGATTCAGATAATCA	5	+	64519166-64519215	5qC3.1	Mus musculus phosphoglucomutase 1 (Pgm1), mRNA.		The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IDA]	Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence IDA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence IMP]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence IDA]	Pgm-1; Pgm2; 3230402E02Rik	Pgm-1; Pgm2; 3230402E02Rik
Mus musculus	Riken	ILMN_203922	ILMN_203922	9930018C24RIK	ri|9930018C24|PX00119P08|AK036848|2535					AK036848	9930018C24Rik		ILMN_1219224	003450008	S	2225	GCTGGTGTTCCACATCTTGCTCTTCAGCCTCCAGAAGGGACTGTGAGCCA										
Mus musculus	RefSeq	ILMN_214798	ILMN_214798	AP4S1	NM_021710.1	NM_021710.1		11782	17998680	NM_021710.1	Ap4s1	NP_068356.1	ILMN_2805071	006100020	S	732	GAGCCAGAATTCTTGCCCCTCTGCTGATTCTTGACAAGCTGTCGGAAAGC	12	+	52660249-52660298	12qC1	Mus musculus adaptor-related protein complex AP-4, sigma 1 (Ap4s1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI314282	AI314282
Mus musculus	MEEBO	ILMN_211745	ILMN_211745	DNAJB6	scl0023950.1_557	NM_011847.1			6754735	NM_011847.1	Dnajb6		ILMN_1221204	003940608	S	557	CGGCGCCATTTTTCTCTACCTTCAGTGGATTTCCTTCTTTTGGAAGTGGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]		
Mus musculus	RefSeq	ILMN_220535	ILMN_220535	STK35	NM_183262.2	NM_183262.2		67333	84490406	NM_183262.2	Stk35	NP_899085.2	ILMN_3155190	001500364	A	5603	ACAGCCATTACTGAGGGCCAAGTCTGCTACCATTCATTGCCTAGGGCCCC	2	+	129657475-129657524	2qF1	Mus musculus serine/threonine kinase 35 (Stk35), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	1700054C12Rik; CLIK1	1700054C12Rik; CLIK1
Mus musculus	RefSeq	ILMN_220535	ILMN_220535	STK35	NM_183262.2	NM_183262.2		67333	84490406	NM_183262.2	Stk35	NP_899085.2	ILMN_3076180	004560019	I	1534	CCCACAGGACCGACCTGATGCTTTTGAACTTGAAACCCGAATGGACCAGG	2	+	129636870-129636919	2qF1	Mus musculus serine/threonine kinase 35 (Stk35), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	1700054C12Rik; CLIK1	1700054C12Rik; CLIK1
Mus musculus	RefSeq	ILMN_196556	ILMN_196556	DEFCR-RS10	NM_007845.1	NM_007845.1		13219	6681162	NM_007845.1	Defcr-rs10	NP_031871.1	ILMN_2746576	006130438	S	268	CCATGGTGCCCAATGTGCCCGAGGTGCCCGAGCTGCAAATGCAATCCAAA					Mus musculus defensin related cryptdin, related sequence 10 (Defcr-rs10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]		CRS4C-4	CRS4C-4
Mus musculus	RefSeq	ILMN_196556	ILMN_196556	DEFCR-RS10	NM_007845.1	NM_007845.1		13219	6681162	NM_007845.1	Defcr-rs10	NP_031871.1	ILMN_1218165	004610035	S	206	TTCAAGATGCAGCCGTAGGAATGGCTCGGCCGTGCCCACCATGCCCCAGT					Mus musculus defensin related cryptdin, related sequence 10 (Defcr-rs10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]		CRS4C-4	CRS4C-4
Mus musculus	RefSeq	ILMN_222378	ILMN_222378	PPAPDC3	NM_145521.3	NM_145521.3		227721	142356125	NM_145521.3	Ppapdc3	NP_663496.1	ILMN_1215127	006580328	S	1022	AGAGAGGTGGCTAGAGGTGGGTCAGTGAGTGGGGACGGACCGACTCAACT	2	+	31965538-31965587	2qB	Mus musculus phosphatidic acid phosphatase type 2 domain containing 3 (Ppapdc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	D830019K17Rik	D830019K17Rik
Mus musculus	RefSeq	ILMN_215649	ILMN_215649	RAP2IP	NM_016759.1	NM_016759.1		51799	7949124	NM_016759.1	Rap2ip	NP_058039.1	ILMN_2856798	001110255	S	1400	ATGAGTCCCCCAACCCAGGCCACCCTTCAAGAACACCACCAACCTAGCCT	11	+	102218272-102218321	11qD	Mus musculus Rap2 interacting protein (Rap2ip), mRNA.				Rpip8	Rpip8
Mus musculus	RefSeq	ILMN_210799	ILMN_210799	ITGB1	NM_010578.1	NM_010578.1		16412	45504393	NM_010578.1	Itgb1	NP_034708.1	ILMN_2609304	003890670	S	14	AGGCCCGCCGACGCCACCCGAGACCAACCGAGAAGCCGAGGCCCGCCGAC	8	+	131209694-131209743	8qE2	Mus musculus integrin beta 1 (fibronectin receptor beta) (Itgb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence ISO]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence ISO]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IMP]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IPI]	Fnrb; AA960159; 4633401G24Rik; gpIIa; CD29; AA409975	Fnrb; AA960159; 4633401G24Rik; gpIIa; CD29; AA409975
Mus musculus	RefSeq	ILMN_210799	ILMN_210799	ITGB1	NM_010578.1	NM_010578.1		16412	45504393	NM_010578.1	Itgb1	NP_034708.1	ILMN_2789077	003930307	S	3472	CACAAATACTGTAAGCTGTCCTGCTGCTTGCAGGACTACAGGGCCTGGGC	8	+	131256884-131256933	8qE2	Mus musculus integrin beta 1 (fibronectin receptor beta) (Itgb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence ISO]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence ISO]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IMP]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IPI]	Fnrb; AA960159; 4633401G24Rik; gpIIa; CD29; AA409975	Fnrb; AA960159; 4633401G24Rik; gpIIa; CD29; AA409975
Mus musculus	Riken	ILMN_205828	ILMN_205828	A530078M04RIK	ri|A530078M04|PX00142H17|AK041066|1951					AK041066	A530078M04Rik		ILMN_2575526	007150364	S	1315	GGGAAGAAACTTCTGCGGCCCAAGCACAGGAGTGAGTCGTTCCCTTTACC										
Mus musculus	RefSeq	ILMN_205906	ILMN_248319	9830167H18RIK	XM_910524.3	XM_910524.3		620419	149258840	XM_910524.3	9830167H18Rik	XP_915617.1	ILMN_1226315	004890593	S	708	GAGTGTGGAAAGAACTCTGTTTGTGCACATGGAGGAAGCCCCACTATGGG					PREDICTED: Mus musculus RIKEN cDNA 9830167H18 gene, transcript variant 1 (9830167H18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215103	ILMN_215103	TAF9	NM_027139.4	NM_027139.4		108143	142373000	NM_027139.4	Taf9	NP_081415.1	ILMN_1224778	007550021	S	442	CCCCCGAGAGATTTCTTATTAGATATTGCACGACAAAGAAATCAAACCCC	13	+	101425265-101425314	13qD1	Mus musculus TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf9), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]	AA673500; 4921516M08Rik; 2810046E22Rik; 2310012M09Rik; Taf2g; AU045423; MGC117979	AA673500; 4921516M08Rik; 2810046E22Rik; 2310012M09Rik; Taf2g; AU045423; MGC117979
Mus musculus	RefSeq	ILMN_199806	ILMN_199806	LOC383036	XM_356814.1	XM_356814.1			38077521	XM_356814.1	LOC383036		ILMN_2536553	003840035	S	336	GGAGCAGCTGACTCAGGACCAGGATGTGGATGTCAAGTACTTTGTCCAGA										
Mus musculus	MEEBO	ILMN_190309	ILMN_190309	ZFP617	scl0170938.6_163	NM_133358.1			20373158	NM_133358.1	Zfp617		ILMN_2503418	002640386	S	16	ACTGAAAATGCATACAAAAATCCTGGGGGAAATCTAAGATACCAAGTGGT								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190309	ILMN_190309	ZFP617	scl0170938.6_163	NM_133358.1			20373158	NM_133358.1	Zfp617		ILMN_2503420	007510707	S	17	CTGAAAATGCATACAAAAATCCTGGGGGAAATCTAAGATACCAAGTGGTA								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184683	ILMN_184683	SMS	scl22129.3_290				31543746	NM_009214	Sms		ILMN_1232323	006840064	S	1	TGAGGGACCGTGTCAGGCTGCGGGCCCACAACTAAATAATTACAGTCATG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses, which is involved in nucleic acid packaging. Synthesis is regulated by ornithine decarboxylase which plays a key role in control of DNA replication [goid 8215] [evidence IMP]	Catalysis of the reaction: S-adenosylmethioninamine + spermidine = 5'-methylthioadenosine + spermine [goid 16768] [evidence ISA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209738	ILMN_209738	SMPDL3A	NM_020561.2	NM_020561.2		57319	114431241	NM_020561.2	Smpdl3a	NP_065586.3	ILMN_1224116	006520128	S	1372	GACAGCAGTGCAACTTGTGACCAGCATTGTAAGACCTTACAGGTCTGTGC	10	+	57531217-57531266	10qB4	Mus musculus sphingomyelin phosphodiesterase, acid-like 3A (Smpdl3a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IEA]	AI529588; 0610010C24Rik; ASML3A; ASM3A; ASML3	AI529588; 0610010C24Rik; ASML3A; ASM3A; ASML3
Mus musculus	Riken	ILMN_205779	ILMN_205779	D230009O13RIK	ri|D230009O13|PX00187L08|AK051848|2469					AK051848	D230009O13Rik		ILMN_1220492	007510142	S	1937	TGTGCAGGAGCCCTGAGGAAAACCAGACCAGGGCACTGAGTTGGAGATGG										
Mus musculus	RefSeq	ILMN_215986	ILMN_215986	OLFR129	NM_146327.1	NM_146327.1		258324	22129639	NM_146327.1	Olfr129	NP_666439.1	ILMN_2666043	000630270	S	648	GGTAGCCATCCTCTGTATTTCTAGTCCATTTTTACTCATCATTTATTCCT	17	-	38191839-38191888	17qB1	Mus musculus olfactory receptor 129 (Olfr129), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR263-9	MOR263-9
Mus musculus	RefSeq	ILMN_209457	ILMN_209457	SCX	NM_198885.2	NM_198885.2		20289	40254412	NM_198885.2	Scx	NP_942588.1	ILMN_1226016	000240646	S	681	AGAGACGGCGGCGAGAACACCCAGCCCAAACAGATCTGCACCTTCTGCCT	15	+	76288548-76288597	15qD3	Mus musculus scleraxis (Scx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	BB114693; Scl	BB114693; Scl
Mus musculus	MEEBO	ILMN_186218	ILMN_186218	AW125296	scl26440.1.1796_1						AW125296		ILMN_2433635	005360519	S	17	CCCATGGTTTCAGGTAGGCCAGAGACATCTGTGCAGCCTGTCTGACTCTT										
Mus musculus	RefSeq	ILMN_222046	ILMN_222046	PEPD	NM_008820.1	NM_008820.1		18624	6679278	NM_008820.1	Pepd	NP_032846.1	ILMN_2743831	003400551	S	1489	ATGGCAGGCTGCGACAAGGCATCTGTGCCCTTCTCTGGCCAAAAGTAGAG	7	+	35829339-35829387:35829388-35829388	7qB1	Mus musculus peptidase D (Pepd), mRNA.		The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	Pep-4; Pep4	Pep-4; Pep4
Mus musculus	RefSeq	ILMN_214705	ILMN_214705	CIAO1	NM_025296.2	NM_025296.2		26371	31542398	NM_025296.2	Ciao1	NP_079572.2	ILMN_1218843	000940139	S	2630	TGGGGCAGTGGTTTTAACAGTACAGGATGCATGGGTACAGCTGAGGAGCC	2	-	126932700-126932749	2qF1	Mus musculus cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae) (Ciao1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	Wdr39; AW210570	Wdr39; AW210570
Mus musculus	RefSeq	ILMN_213327	ILMN_238823	KLC4	NM_029091.2	NM_029091.2		74764	142366781	NM_029091.2	Klc4	NP_083367.1	ILMN_1251301	002970273	S	2117	TCTCTACTTTGGAGTCCTCTAGAGTAGCTGACTGAGGCTCCCAAGGTGGG	17	-	46767735-46767784	17qC	Mus musculus kinesin light chain 4 (Klc4), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	AA408085; Knsl8; AW146303; 1200014P03Rik	AA408085; Knsl8; AW146303; 1200014P03Rik
Mus musculus	RefSeq	ILMN_214578	ILMN_258826	A330102K04RIK	XR_001572.1	XR_001572.1		328563	94399083	XR_001572.1	A330102K04Rik		ILMN_1252157	005900324	S	1999	CGTGTGATGGTCTTCTTAACTGATGCTGGTTCCATGGTAGTGATGTTTTA				15qE1	PREDICTED: Mus musculus RIKEN cDNA A330102K04 gene (A330102K04Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_200355	ILMN_200355	LOC386287	XM_359159.1	XM_359159.1			38081404	XM_359159.1	LOC386287		ILMN_1244290	001740719	S	1431	AGTTGCTGTGGAGTTTACACCCAAAGTCTGCTCAGGGCACCAGCCCAGAC										
Mus musculus	MEEBO	ILMN_219248	ILMN_219248	CCNT1	scl0328601.1_103	XM_286697.2			38077140	XM_286697.2	Ccnt1		ILMN_1239224	000430553	S	526	ATTATTCTGCTGTCGCCTCTGTCCTCCGTGGGGCACCTCAGTTTTGGGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a small nuclear RNA (snRNA) [goid 17069] [evidence IDA]		
Mus musculus	MEEBO	ILMN_222182	ILMN_222182	1700116B05RIK	scl49039.2.1_17	XM_354966.1			38079813	XM_354966.1	1700116B05Rik		ILMN_2745860	001940086	S	242	GCTATGCCTCGTCCAAGCTGTCAGGCGTCAACATTCGTCAAGCCTTTCGG										
Mus musculus	RefSeq	ILMN_260474	ILMN_260474	D430018E03RIK	NM_001002769.1	NM_001002769.1		442800	50582562	NM_001002769.1	D430018E03Rik	NP_001002769.1	ILMN_2831523	006060037	S	3592	TCCTGGTCTACAGGACGGCAGGTTCCAGGACAGCCAAAATTACACAGAGA	5	-	143139407-143139456	5qG2	Mus musculus RIKEN cDNA D430018E03 gene (D430018E03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214508	ILMN_214508	PARD3	NM_033620.1	NM_033620.1		93742	15809049	NM_033620.1	Pard3	NP_296369.1	ILMN_1253126	001570327	S	3864	GGTATTCCAGTTACCAGGGCTCAAGGAATGGCTATCTAGGCGGGCACGGC	8	+	130134427-130134476	8qE2	Mus musculus par-3 (partitioning defective 3) homolog (C. elegans) (Pard3), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IC ]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ASIP; AI256638; PAR-3; AA960621; Par3; D8Ertd580e	ASIP; AI256638; PAR-3; AA960621; Par3; D8Ertd580e
Mus musculus	RefSeq	ILMN_214508	ILMN_214508	PARD3	NM_033620.1	NM_033620.1		93742	15809049	NM_033620.1	Pard3	NP_296369.1	ILMN_2648709	004610497	S	2277	AGGGGCTGGATGAGTCGCCCACCAGGAACGCAGCACTGAGCAGGATAATG	8	+	129922600-129922649	8qE2	Mus musculus par-3 (partitioning defective 3) homolog (C. elegans) (Pard3), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IC ]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ASIP; AI256638; PAR-3; AA960621; Par3; D8Ertd580e	ASIP; AI256638; PAR-3; AA960621; Par3; D8Ertd580e
Mus musculus	RefSeq	ILMN_221376	ILMN_221376	SH3BP5L	NM_024480.3	NM_024480.3		79566	142363838	NM_024480.3	Sh3bp5l	NP_077800.2	ILMN_2734789	007210497	S	2834	GATGGTCACAATGAAAACCTGTGGGTTTGAGGTGGCTGTTCAGGCAGCAC	11	+	58161084-58161133	11qB1.3	Mus musculus SH3 binding domain protein 5 like (Sh3bp5l), mRNA.				2310074E09Rik; mKIAA1720; MGC7813; BC003251; RP23-386K17.4	2310074E09Rik; mKIAA1720; MGC7813; BC003251; RP23-386K17.4
Mus musculus	RefSeq	ILMN_221579	ILMN_221579	H2-M10.2	NM_177923.1	NM_177923.1		333715	29244569	NM_177923.1	H2-M10.2	NP_808591.1	ILMN_2737429	006330259	S	497	AGACAGACTTGGTGAATGTAGGCGCAGCGGAAGGCTGGAGGACCTACCTG	17	-	36490092-36490141	17qB1	Mus musculus histocompatibility 2, M region locus 10.2 (H2-M10.2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			4.7H	4.7H
Mus musculus	Riken	ILMN_206044	ILMN_206044	IKBKB	ri|D130002N23|PX00182K01|AK051128|3350					AK051128	Ikbkb		ILMN_1238472	004830452	S	3018	GTTCCCAGTGAGGACTTATTACGAATGGGCCTGAGCTCCGTGCAGGCAAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The process of introducing a phosphate group into an I-kappaB protein [goid 7252] [evidence TAS]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + IkappaB protein = ADP + IkappaB phosphoprotein [goid 8384] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA];  [goid 4702] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_192728	ILMN_213911	SIPA1	NM_011379.3	NM_011379.3		20469	61556719	NM_011379.3	Sipa1	NP_035509.3	ILMN_1221660	000130189	S	93	AGACCCTGAGGAGGTCTGCTCTTGTTTGGTTCTGGAGACCCAGCTGAGGG	19	-	5662716-5662765	19qA	Mus musculus signal-induced proliferation associated gene 1 (Sipa1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA4074; SPA-1; KIAA4074	mKIAA4074; SPA-1; KIAA4074
Mus musculus	RefSeq	ILMN_213911	ILMN_213911	SIPA1	NM_011379.3	NM_011379.3		20469	61556719	NM_011379.3	Sipa1	NP_035509.3	ILMN_2642133	004760725	S	3318	AAAGGTCTCTCACCTAGAGTCCATGCTCTGGAAGCTCCAGGAGGACCTGC	19	-	5651640-5651689	19qA	Mus musculus signal-induced proliferation associated gene 1 (Sipa1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA4074; SPA-1; KIAA4074	mKIAA4074; SPA-1; KIAA4074
Mus musculus	MEEBO	ILMN_218072	ILMN_218072	4930432F03RIK	scl24281.1.2_22	XM_149432.1			20828464	XM_149432.1	4930432F03Rik		ILMN_2691204	004850259	S	378	GGAGGATGTAAAACGTTTAGTAGTACCCCCATACGGTCCACAAAAGTGCC										
Mus musculus	MEEBO	ILMN_210628	ILMN_210628	9130218E19RIK	scl17656.1.1_37	XM_358331.1			38050322	XM_358331.1	9130218E19Rik		ILMN_2607557	007510504	S	879	GGAGTGGATCTCCATCCATTCCTCAAAAATGAGCATTAGCGGTATCCTCC										
Mus musculus	RefSeq	ILMN_215844	ILMN_229918	MEI1	XM_901649.3	XM_901649.3		74369	149266714	XM_901649.3	Mei1	XP_906742.2	ILMN_1236781	002680682	S	3820	GTCCAGAGCATGGGTCTCCTAAATGACCAACACATGACCCAGACCTTGCA	15	+	81955583-81955632	15qE1	PREDICTED: Mus musculus meiosis defective 1, transcript variant 4 (Mei1), mRNA.		Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IMP]			
Mus musculus	RefSeq	ILMN_218057	ILMN_218057	OLFR123	NM_146630.1	NM_146630.1		258623	33238929	NM_146630.1	Olfr123	NP_666841.1	ILMN_2900151	003840056	S	582	GGTCCAACTCTTTGTAGCCTCATTGGTCTTGCTGCTCCTACCCTTAGCCC	17	+	37932972-37933021	17qB1	Mus musculus olfactory receptor 123 (Olfr123), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR256-9	MOR256-9
Mus musculus	RefSeq	ILMN_254712	ILMN_254712	B230217C12RIK	NM_001080935.1	NM_001080935.1		68127	124286857	NM_001080935.1	B230217C12Rik	NP_001074404.1	ILMN_3040617	002060687	I	658	TGCTTCACAAGCAGGCGTTCCCTTGTAACCTCAAGGGCAAACACTGATCA	11	+	97703826-97703875	11qD	Mus musculus RIKEN cDNA B230217C12 gene (B230217C12Rik), mRNA.				AI840637	AI840637
Mus musculus	MEEBO	ILMN_217581	ILMN_217581	EDG5	scl36156.3_7				45433561	NM_010333	Edg5		ILMN_2773936	006760397	S	2731	CATATAGCTTCCCAGATGTCCTCCTTGTGCTGGAAACCCAGATCTGGGCC										
Mus musculus	RefSeq	ILMN_217444	ILMN_217444	MTCP1	NM_010839.5	NM_010839.5		17763	142343581	NM_010839.5	Mtcp1	NP_034969.1	ILMN_1234358	004060068	S	714	GAGAAGTTGGCAATGAAGTCTGGATCCAAGTAAAGTTGTACTGAGATGTT	X	-	72661648-72661697	XqA7.3	Mus musculus mature T-cell proliferation 1 (Mtcp1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]				
Mus musculus	RefSeq	ILMN_217227	ILMN_217227	PIK3CB	NM_029094.1	NM_029094.1		74769	29789234	NM_029094.1	Pik3cb	NP_083370.1	ILMN_2680549	003440286	S	4559	CTTTCTTCTCCAAAGACATGTGGGAGCCTTCAATCCTCAGTGGCATGGGA	9	-	98847875-98847924	9qE3.3	Mus musculus phosphatidylinositol 3-kinase, catalytic, beta polypeptide (Pik3cb), mRNA.	A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IMP]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence IMP]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IMP]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any of the insulin receptor substrate (IRS) proteins, adaptor proteins that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex [goid 43560] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	1110001J02Rik; AI447572; p110beta; MGC150132	1110001J02Rik; AI447572; p110beta; MGC150132
Mus musculus	MEEBO	ILMN_215072	ILMN_215072	NBR1	scl40878.26_32	NM_008676.1			6679019	NM_008676.1	Nbr1		ILMN_1220889	006620279	S	2848	GGATTCACCAGGAGTGGATTCACCAGCTACCATGCACGAAGTTCCCCCAG								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215072	ILMN_215072	NBR1	scl40878.26_32	NM_008676.1			6679019	NM_008676.1	Nbr1		ILMN_2664797	006020114	S	2849	GATTCACCAGGAGTGGATTCACCAGCTACCATGCACGAAGTTCCCCCAGC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223425	ILMN_223425	GPBAR1	NM_174985.1	NM_174985.1		227289	27923942	NM_174985.1	Gpbar1	NP_778150.1	ILMN_1248346	005290309	S	751	GAGCGTCGCCCACCACTAGGGCCTGGAACTCTGTTATCGCTCATCTCATT	1	+	74325924-74325973	1qC3	Mus musculus G protein-coupled bile acid receptor 1 (Gpbar1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISO]	GPR131; M-BAR; GPCR; BG37; TGR5	GPR131; M-BAR; GPCR; BG37; TGR5
Mus musculus	RefSeq	ILMN_215223	ILMN_215223	TMEM79	NM_024246.5	NM_024246.5		71913	146149228	NM_024246.5	Tmem79	NP_077208.1	ILMN_1231048	003120719	S	1848	CTCCAAAAGAACTGGGTGTGAACTCACATGGTGGCTAGGAAGGCAGAGCG				3qF1	Mus musculus transmembrane protein 79 (Tmem79), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2310074C17Rik; 2310042N02Rik	2310074C17Rik; 2310042N02Rik
Mus musculus	RefSeq	ILMN_187480	ILMN_187480	TMEM189	NM_145538.2	NM_145538.2		407243	118130157	NM_145538.2	Tmem189	NP_663513.1	ILMN_1243662	002470538	S	325	GGCCTGGTACATTGGGGTGCTGATACATGGGGTTCTGTGGACCTGCCCAT	2	-	167472477-167472526	2qH3	Mus musculus transmembrane protein 189 (Tmem189), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	Kua; RP23-118A2.8	Kua; RP23-118A2.8
Mus musculus	RefSeq	ILMN_221042	ILMN_221042	OLFR125	NM_146290.1	NM_146290.1		258287	22129704	NM_146290.1	Olfr125	NP_666402.1	ILMN_2730288	003390368	S	673	ATTCCATCAGCTGATAGTCGGACTAAGGTGTTCTCCACCTGTCTACCACA	17	+	37972618-37972667	17qB1	Mus musculus olfactory receptor 125 (Olfr125), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR218-8	MOR218-8
Mus musculus	RefSeq	ILMN_223329	ILMN_223329	SMARCB1	NM_011418.1	NM_011418.1		20587	6755577	NM_011418.1	Smarcb1	NP_035548.1	ILMN_1254840	000670376	S	1103	GGCGGGGAGTTTGTCACCACCATTGCATACAGCATCCGAGGACAGCTGAG	10	-	75372992-75373026:75374264-75374278	10qC1	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (Smarcb1), mRNA.	A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1741] [evidence IDA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence ISO]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process involved in the replication of a retroviral genome. Retroviruses use RNA as their nucleic acid and reverse transcriptase to copy their genome into the DNA of the host cells chromosomes [goid 45090] [evidence ISO]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; The hatching of the cellular blastocyst from the zona pellucida [goid 1835] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SNF5/INI1; Snf5; AU020204; MGC132387; Ini1; Baf47	SNF5/INI1; Snf5; AU020204; MGC132387; Ini1; Baf47
Mus musculus	RefSeq	ILMN_188281	ILMN_256484	RPS6KB2	NM_021485.2	NM_021485.2		58988	118130463	NM_021485.2	Rps6kb2	NP_067460.1	ILMN_2611256	005550445	S	1234	AGACGCCTTAACAGCAGTCCCCGCACCCCCATCAGCCCCCTCAAGTTCTC	19	-	4157184-4157199:4157482-4157515	19qA	Mus musculus ribosomal protein S6 kinase, polypeptide 2 (Rps6kb2), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	70kDa; S6K2	70kDa; S6K2
Mus musculus	MEEBO	ILMN_211418	ILMN_211418	ACAA2	scl0002163.1_25				31343391	NM_177470	Acaa2		ILMN_2704826	004010398	S	89	TTGGAGCTTACGGGGGCCTTCTCAAGGACTTCTCTGCCACCGATTTAACT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA [goid 3988] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211418	ILMN_211418	ACAA2	scl0002163.1_25				31343391	NM_177470	Acaa2		ILMN_2704822	005090414	S	90	TGGAGCTTACGGGGGCCTTCTCAAGGACTTCTCTGCCACCGATTTAACTG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA [goid 3988] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193691	ILMN_310049	LOC100042018	XM_001477989.1	XM_001477989.1		100042018	149253164	XM_001477989.1	LOC100042018	XP_001478039.1	ILMN_2499546	006370215	S	632	CCCTCTCTCCTAGCTTGGTAATGAAGTGTATTTATTGGTGAAGGAAACAG	4	+	132848754-132848803	4qD2.3	PREDICTED: Mus musculus hypothetical protein LOC100042018 (LOC100042018), mRNA.					
Mus musculus	RefSeq	ILMN_237726	ILMN_237726	TBC1D10B	NM_144522.2	NM_144522.2		68449	31559967	NM_144522.2	Tbc1d10b	NP_653105.2	ILMN_3008497	006200315	S	3294	TGAAGAGTGCTGTAGAGTAAGGGGAGTGGGGGAGGCAGGCACAAAGTCTG	7	-	126988877-126988926	7qF3	Mus musculus TBC1 domain family, member 10b (Tbc1d10b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	C87963; 1110003P22Rik	C87963; 1110003P22Rik
Mus musculus	MEEBO	ILMN_209323	ILMN_209323	A630031M04RIK	scl0320659.6_58	NM_177220.2			31343099	NM_177220.2	A630031M04Rik		ILMN_1248558	006180035	S	2643	TCAGGAGCTATGAATCCAAGTGCTTCAGAGTGAGGTATGGGGATCTGAAC										
Mus musculus	MEEBO	ILMN_209323	ILMN_209323	A630031M04RIK	scl0320659.6_58	NM_177220.2			31343099	NM_177220.2	A630031M04Rik		ILMN_2594726	004900367	S	2644	CAGGAGCTATGAATCCAAGTGCTTCAGAGTGAGGTATGGGGATCTGAACT										
Mus musculus	RefSeq	ILMN_199985	ILMN_199985	LOC384154	XM_357451.1	XM_357451.1			38079567	XM_357451.1	LOC384154		ILMN_1227410	003180041	S	561	CGTCGCAGTTCCAGGGTGCCTAGTACAGGAGTCTGTGGGCAGCAGAGAGA										
Mus musculus	Riken	ILMN_206579	ILMN_206579	D830027M14RIK	ri|D830027M14|PX00199D24|AK085913|1806					AK085913	D830027M14Rik		ILMN_2581136	007650706	S	1735	CATGGCAAGATGCACTTACGTTCCTAGGCCCATGCTACTACCTACATGAG										
Mus musculus	RefSeq	ILMN_244670	ILMN_244670	PCDHAC2	NM_001003672.1	NM_001003672.1		353237	51092282	NM_001003672.1	Pcdhac2	NP_001003672.1	ILMN_2999354	002070450	S	2475	GACTGACAACAGGCAACTCACCGGCCAAAGTAGGCACAGTACCGGGAACC	18	+	37306097-37306146	18qB3	Mus musculus protocadherin alpha subfamily C, 2 (Pcdhac2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CNRc2	CNRc2
Mus musculus	RefSeq	ILMN_222616	ILMN_222616	PANK3	NM_145962.2	NM_145962.2		211347	139948619	NM_145962.2	Pank3	NP_666074.1	ILMN_2752327	005820577	S	2192	CTGAAGTTTTTGCGCATATTTGGTGGCGCTACACTTTCTTTATCTCATGC	11	+	35599614-35599663	11qA4	Mus musculus pantothenate kinase 3 (Pank3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15937] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + pantothenate = ADP + D-4'-phosphopantothenate [goid 4594] [evidence IEA]	MGC38148	MGC38148
Mus musculus	Riken	ILMN_206484	ILMN_206484	D430019F01RIK	ri|D430019F01|PX00194G14|AK084957|3320					AK084957	D430019F01Rik		ILMN_1239713	000050020	S	2970	TTATCTCTCCTCTGCCGGGCCAAGCCCCACGTTTGACTCAGCAATAACAG										
Mus musculus	Riken	ILMN_205522	ILMN_205522	PPM1D	ri|D130053L12|PX00184N16|AK051509|3165					AK051509	Ppm1d		ILMN_1246823	004150475	S	2856	TAAACAGAGTTAGCGTTTGCAGCCTGTCATCCATCCTCAGGCCAAGGTCC						A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the removal of a serine- or threonine-bound phosphate group from a protein; action dependent on magnesium [goid 4724] [evidence ISS]		
Mus musculus	RefSeq	ILMN_221742	ILMN_221742	LEFTY1	NM_010094.3	NM_010094.3		13590	126012509	NM_010094.3	Lefty1	NP_034224.1	ILMN_1246073	004810187	S	1323	TTTTTACCTTCGAGGAATGTGACTCGCTGGCCCCTGGAGGCGCTCTGACC	1	+	182868251-182868300	1qH4	Mus musculus left right determination factor 1 (Lefty1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IGI]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the transforming growth factor beta receptor [goid 5160] [evidence IEA]	lefty; Stra3; lefty-1; Leftb; AI450052; Tgfb4	lefty; Stra3; lefty-1; Leftb; AI450052; Tgfb4
Mus musculus	Riken	ILMN_204974	ILMN_204974	B830005I23RIK	ri|B830005I23|PX00072D20|AK046784|3355					AK046784	B830005I23Rik		ILMN_2569032	003420246	S	3176	CCCAAGACCTTAAATCAGGGCAGACTGAAACGCAGTTCCAGCCAGGCAGC										
Mus musculus	MEEBO	ILMN_184214	ILMN_184214	SPG20	scl23190.10_91				21450268	NM_144895	Spg20		ILMN_2416791	006270270	S	5	CCACAGGGAAGAATATGGAACCCTTGGTGGGGAGCCCCAACTTTTGCAGA										
Mus musculus	MEEBO	ILMN_184214	ILMN_184214	SPG20	scl23190.10_91				21450268	NM_144895	Spg20		ILMN_1244819	006580100	S	4	ACCACAGGGAAGAATATGGAACCCTTGGTGGGGAGCCCCAACTTTTGCAG										
Mus musculus	RefSeq	ILMN_223802	ILMN_259802	LAMA2	NM_008481.2	NM_008481.2		16773	117647248	NM_008481.2	Lama2	NP_032507.2	ILMN_2769479	005910039	S	8778	GTGGGGATTCTGTATGTCGGTGGATTGCCGATCAACTATACCACACGCAG	10	-	26710621-26710670	10qA4	Mus musculus laminin, alpha 2 (Lama2), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]; Any process that activates, maintains or increases the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 32224] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	mer; dy; merosin; KIAA4087; 5830440B04; mKIAA4087	mer; dy; merosin; KIAA4087; 5830440B04; mKIAA4087
Mus musculus	RefSeq	ILMN_196112	ILMN_236290	B4GALT5	NM_019835.2	NM_019835.2		56336	116089305	NM_019835.2	B4galt5	NP_062809.2	ILMN_1220235	005340044	S	3006	TTGTTCTTTTTGTAGACTAGTGTGGTAACTAGGGAACAGATGGCACTGCA	2	-	167125093-167125142	2qH3	Mus musculus UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 (B4galt5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9430078I07Rik; AW049941; AW539721	9430078I07Rik; AW049941; AW539721
Mus musculus	RefSeq	ILMN_196112	ILMN_236290	B4GALT5	NM_019835.2	NM_019835.2		56336	116089305	NM_019835.2	B4galt5	NP_062809.2	ILMN_2641660	000270035	S	1417	GGACCATAGGGGTTCCAGAAAACTGTCACAGAGCACACGCACAAAGGCCT	2	-	167126682-167126731	2qH3	Mus musculus UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5 (B4galt5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9430078I07Rik; AW049941; AW539721	9430078I07Rik; AW049941; AW539721
Mus musculus	RefSeq	ILMN_200908	ILMN_200908	LOC382254	XM_358721.1	XM_358721.1			38086959	XM_358721.1	LOC382254		ILMN_2540427	001500639	S	241	CCGTTGGTCCCCCTGCATTCAAAGCCCAACTCCTTTAAGCTATGCGCGGT										
Mus musculus	MEEBO	ILMN_223870	ILMN_223870	CDC25B	scl20268.15_133				12963486	NM_023117	Cdc25b		ILMN_2770798	004230632	S	2832	TTTGGAAATGTTAAAGAAGCATTGTTATGGGGAGGGGGGAGCAACCTCTG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IMP]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through M phase, the part of the mitotic cell cycle during which mitosis takes place [goid 87] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The cell cycle process whereby the first meiotic division occurs in the female germline [goid 7144] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196349	ILMN_196349	1700123K08RIK	NM_029693.2	NM_029693.2		76658	141802060	NM_029693.2	1700123K08Rik	NP_083969.1	ILMN_2760476	000840634	S	575	TTGGAGGATCAGGAGGCCATCGCACTTAAACTTGAGGAAGATCCCCTAGG	5	-	139003769-139003779:139004047-139004085	5qG2	Mus musculus RIKEN cDNA 1700123K08 gene (1700123K08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196349	ILMN_196349	1700123K08RIK	NM_029693.2	NM_029693.2		76658	141802060	NM_029693.2	1700123K08Rik	NP_083969.1	ILMN_2648526	007160471	S	828	ATGTGGCAATAGATGAAGCTGCAGATGAGGCTGCAGATGTTTCACCTGCC	5	-	139003516-139003565	5qG2	Mus musculus RIKEN cDNA 1700123K08 gene (1700123K08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_253965	ILMN_253965	RHEB	NM_053075.2	NM_053075.2		19744	28626507	NM_053075.2	Rheb	NP_444305.2	ILMN_3079738	006380609	I	1226	GTCCTGGAACCCACTCTGTAGACCAGGCTGTCCTCGAACTCGAGATTTGC	5	-	24313133-24313182	5qA3	Mus musculus RAS-homolog enriched in brain (Rheb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_253965	ILMN_253965	RHEB	NM_053075.2	NM_053075.2		19744	28626507	NM_053075.2	Rheb	NP_444305.2	ILMN_3159059	001050541	A	640	GAGCAGCTTCACAAGGAAAGTCTTCGTGCTCGGTGATGTGACAATTCTGC	5	-	24313719-24313728:24313729-24313768	5qA3	Mus musculus RAS-homolog enriched in brain (Rheb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223372	ILMN_242262	ERBB3	NM_010153.1	NM_010153.1		13867	61098018	NM_010153.1	Erbb3	NP_034283.1	ILMN_1250597	002900164	S	259	GTACTGGTGGCCATGAATGAATTCTCTGTACTGCCCTTACCTAACCTCCG	10	-	128022180-128022229	10qD3	Mus musculus v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) (Erbb3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence ISO]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions [goid 21545] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Erbb-3; C76256; MGC117742; Her3; Erbb3r	Erbb-3; C76256; MGC117742; Her3; Erbb3r
Mus musculus	RefSeq	ILMN_209613	ILMN_258435	LOC544904	XM_914633.2	XM_914633.2		544904	94410324	XM_914633.2	LOC544904	XP_919726.2	ILMN_2597469	000780064	S	71	TCTTCCTGATGGCAGTGGTTACAGGGGTCAATTCAGAGGTTCAGCTGCAG					PREDICTED: Mus musculus similar to idiotypic anti-NP IgG(1) heavy chain V-D-J (LOC544904), mRNA.					
Mus musculus	Riken	ILMN_202316	ILMN_202316	4833412N02RIK	ri|4833412N02|PX00028M15|AK014688|1659					AK014688	4833412N02Rik		ILMN_1242482	005890692	S	1493	GCCCCGGCAGGCCTCAGTGAAACCCAAGCACTTCCTACTGTTGTTTCTAC										
Mus musculus	RefSeq	ILMN_212470	ILMN_212470	DUSP2	NM_010090.2	NM_010090.2		13537	46560572	NM_010090.2	Dusp2	NP_034220.2	ILMN_3009243	001170521	S	1159	TGACGGCTGCTCTGATATGGTGCTCTTCTGAGGTGGCATAAGGGCTGGCC	2	+	127163654-127163703	2qF1	Mus musculus dual specificity phosphatase 2 (Dusp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Interacting selectively with a mitogen-activated protein kinase [goid 51019] [evidence IPI]	PAC1	PAC1
Mus musculus	RefSeq	ILMN_212470	ILMN_212470	DUSP2	NM_010090.2	NM_010090.2		13537	46560572	NM_010090.2	Dusp2	NP_034220.2	ILMN_1242406	004860379	S	1110	TCCTCCCTCCTCATCTTGCCGTCCCACTGGGGTGCTAGGAAATCCAGGAT	2	+	127163605-127163654	2qF1	Mus musculus dual specificity phosphatase 2 (Dusp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Interacting selectively with a mitogen-activated protein kinase [goid 51019] [evidence IPI]	PAC1	PAC1
Mus musculus	RefSeq	ILMN_213396	ILMN_213396	MAPK12	NM_013871.2	NM_013871.2		29857	31980730	NM_013871.2	Mapk12	NP_038899.1	ILMN_2697615	004570414	S	778	GTCCGTTGGCTGCATCATGGCGGAGATGATTACTGGGAAGATCCTGTTCA	15	-	88963510-88963559	15qE3	Mus musculus mitogen-activated protein kinase 12 (Mapk12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Erk6; P38gamma; Sapk3; Prkm12; AW123708	Erk6; P38gamma; Sapk3; Prkm12; AW123708
Mus musculus	RefSeq	ILMN_213396	ILMN_213396	MAPK12	NM_013871.2	NM_013871.2		29857	31980730	NM_013871.2	Mapk12	NP_038899.1	ILMN_1248106	002690392	S	486	GGCACTGATCTGGGCAAACTCATGAAGCATGAGACCCTGAGTGAAGACAG	15	-	88966035-88966084	15qE3	Mus musculus mitogen-activated protein kinase 12 (Mapk12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Erk6; P38gamma; Sapk3; Prkm12; AW123708	Erk6; P38gamma; Sapk3; Prkm12; AW123708
Mus musculus	RefSeq	ILMN_213396	ILMN_213396	MAPK12	NM_013871.2	NM_013871.2		29857	31980730	NM_013871.2	Mapk12	NP_038899.1	ILMN_2724570	003870079	S	1493	CTGTCCAAGACCCCTACCCAACATGGGACTAGCCTTTGAATTCTGGAGTT	15	-	88961268-88961317	15qE3	Mus musculus mitogen-activated protein kinase 12 (Mapk12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Erk6; P38gamma; Sapk3; Prkm12; AW123708	Erk6; P38gamma; Sapk3; Prkm12; AW123708
Mus musculus	RefSeq	ILMN_214306	ILMN_214306	PEBP1	NM_018858.2	NM_018858.2		23980	84794551	NM_018858.2	Pebp1	NP_061346.2	ILMN_1214488	002760220	S	783	CTGGGGAGGGGTCTAATGTTCTGATGGAGTCATTCTGTTGTTGATATAAA	5	-	117733009-117733058	5qF	Mus musculus phosphatidylethanolamine binding protein 1 (Pebp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IDA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC102065; Pbpr; Pbp1; MGC103131; Pbp; HCNP	MGC102065; Pbpr; Pbp1; MGC103131; Pbp; HCNP
Mus musculus	MEEBO	ILMN_196106	ILMN_196106	2310047B19RIK	scl6673.1.1_89				51764784	XM_150151	2310047B19Rik		ILMN_2716692	005910301	S	1679	CAAACTAGGGAGCTGGAGGAGAGCCCCGTGGTTGGGAATCCTCTCACTGT										
Mus musculus	Riken	ILMN_206637	ILMN_206637	4930412F15RIK	ri|4930412F15|PX00313L20|AK076680|1604					AK076680	4930412F15Rik		ILMN_1253364	003840068	S	1453	GGCAGCCCCAGATACAGCACCCTGATAATCTATATCCGAGCAACCCGAAG										
Mus musculus	RefSeq	ILMN_258085	ILMN_258085	CD52	NM_013706.1	NM_013706.1		23833	14719423	NM_013706.1	Cd52	NP_038734.1	ILMN_2910934	006290768	S	341	ACTGCTGCCACCATCAGTAGCGAGAGACATCCCAACCCACGGGAAGGGTT	4	-	133649554-133649603	4qD3	Mus musculus CD52 antigen (Cd52), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			CLS1; B7-Ag; B7; AI463198; MB7; CAMPATH-1	CLS1; B7-Ag; B7; AI463198; MB7; CAMPATH-1
Mus musculus	Riken	ILMN_206564	ILMN_206564	ANXA6	ri|5930413M14|PX00055D09|AK077843|2079					AK077843	Anxa6		ILMN_1256492	006980682	S	1947	TGGAAGTCAGAGAGGGTGGCTGATTTTTAAAGCACACAGCAAATCTGACC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189745	ILMN_189745	9130215G10RIK	scl0109302.1_30						9130215G10Rik		ILMN_2464003	003610341	S	12	CGTCGTCTGCTCTAGAACATCTGTTACAATTGCCTGTGATTATGATGCCA										
Mus musculus	MEEBO	ILMN_215768	ILMN_215768	5230401M06RIK	scl45424.1.1_193	XM_147852.1			20876439	XM_147852.1	5230401M06Rik		ILMN_2663383	004730296	S	1092	GTAGATAAGGTATCGGGGAAAAGGGTTATGGGGTTCCCAGAGAAGCAGCT										
Mus musculus	RefSeq	ILMN_215556	ILMN_215556	MASP1	NM_008555.1	NM_008555.1		17174	6678809	NM_008555.1	Masp1	NP_032581.1	ILMN_2660969	007510292	S	4862	CTAAATTCATAACCTTATGCCAACCGACTCACTACCTTCACATCCAGCCA	16	-	23449711-23449760	16qB1	Mus musculus mannan-binding lectin serine peptidase 1 (Masp1), mRNA.		Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Masp1/3; CCPII; Crarf; AW048060	Masp1/3; CCPII; Crarf; AW048060
Mus musculus	MEEBO	ILMN_211264	ILMN_211264	5830417I10RIK	scl0002121.1_81	XM_194592.3			38077556	XM_194592.3	5830417I10Rik		ILMN_1224016	004830609	S	989	TTCTCCAGAAAGGCTTGGCGACAGAAGCGGCCATTGGTCCAGAAGCCCCT										
Mus musculus	MEEBO	ILMN_211264	ILMN_211264	5830417I10RIK	scl0002121.1_81	XM_194592.3			38077556	XM_194592.3	5830417I10Rik		ILMN_1222261	002970167	S	5739	CCCAGGGGCTCGTAGTCAAGGAGAGGAACACTGAACTGTGAACTTTGTTT										
Mus musculus	MEEBO	ILMN_222816	ILMN_222816	CDCA1	scl15966.13.1_42	NM_023284.1			12963616	NM_023284.1	Cdca1		ILMN_2755241	000150674	S	1373	CCACTGTTAATCAAGAAATCCACAAGATTAAATCTGCAATTCAACAACTG										
Mus musculus	Riken	ILMN_205064	ILMN_205064	D230036B16RIK	ri|D230036B16|PX00189B11|AK052020|2864					AK052020	D230036B16Rik		ILMN_1259270	006550706	S	2517	CAGAGGAATAACAAAGGCCACCAGCCCTACCTGTCCCTAGACTCTGGTCC										
Mus musculus	RefSeq	ILMN_220583	ILMN_220583	1700001E04RIK	NM_029288.2	NM_029288.2		75438	142353533	NM_029288.2	1700001E04Rik	NP_083564.1	ILMN_2724055	002360148	S	647	GCCAAGGAGCAGCAGGTGTGATCATGAAATCCCCCAGATATCAGACCCAG					Mus musculus RIKEN cDNA 1700001E04 gene (1700001E04Rik), mRNA.					
Mus musculus	Riken	ILMN_205172	ILMN_205172	B230345N14RIK	ri|B230345N14|PX00160F02|AK046161|2314					AK046161	B230345N14Rik		ILMN_1252962	007150445	S	1905	CGTCAGGAAGCAGAGGGCAATGTGCTGGTGTTCAGCTGCCATCCTCCTTT										
Mus musculus	Riken	ILMN_206541	ILMN_206541	2700024D06RIK	ri|2700024D06|ZX00063G09|AK076051|1851					AK076051	2700024D06Rik		ILMN_1245251	006180142	S	36	TGCGGCGAAGGCTGTCCGAGGTAGGCTCCTCTCGGCTCTCCCATGGAGGA										
Mus musculus	RefSeq	ILMN_194906	ILMN_194906	ZFP426	NM_146221.3	NM_146221.3		235028	141803273	NM_146221.3	Zfp426	NP_666333.1	ILMN_2510740	006420133	S	3327	TTAAAGTTATTTGTCCTGCATTCTCAACCATTCTATTATTTTTGAAGTCA	9	-	20273173-20273222	9qA3	Mus musculus zinc finger protein 426 (Zfp426), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfp68-rs1; MGC38791; Zfo61; mKIAA4237; 2900057C04Rik; KRAB1; KIAA4237	Zfp68-rs1; MGC38791; Zfo61; mKIAA4237; 2900057C04Rik; KRAB1; KIAA4237
Mus musculus	RefSeq	ILMN_185446	ILMN_241379	LOC677006	XM_994730.1	XM_994730.1		677006	94394992	XM_994730.1	LOC677006	XP_999824.1	ILMN_1248674	001510193	S	2839	CAGACTCATTTTCTACCCTAAACCTTCGACCCTGTGGGGACTTGTAACTG					PREDICTED: Mus musculus similar to H2A histone family, member O (LOC677006), mRNA.					
Mus musculus	RefSeq	ILMN_214182	ILMN_214182	SDS	NM_145565.1	NM_145565.1		231691	21704135	NM_145565.1	Sds	NP_663540.1	ILMN_1255497	004290259	S	737	CGGGGCGCAGACCCTGAAGCTGTTTTACGAACACCCCATTTTCTCCGAGG	5	+	120933103-120933152	5qF	Mus musculus serine dehydratase (Sds), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-serine = pyruvate + NH3 [goid 3941] [evidence IEA]	SDH; 4432411H13Rik	SDH; 4432411H13Rik
Mus musculus	RefSeq	ILMN_214182	ILMN_214182	SDS	NM_145565.1	NM_145565.1		231691	21704135	NM_145565.1	Sds	NP_663540.1	ILMN_2763983	006270133	S	840	AAGATTCTGGTGGAGCCCGCGTGCGGCGCGGCGCTGGCTGCTGTGTACAG	5	+	120933590-120933639	5qF	Mus musculus serine dehydratase (Sds), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-serine = pyruvate + NH3 [goid 3941] [evidence IEA]	SDH; 4432411H13Rik	SDH; 4432411H13Rik
Mus musculus	RefSeq	ILMN_222012	ILMN_234428	9430056A22RIK	XM_923102.2	XM_923102.2		403208	94399205	XM_923102.2	9430056A22Rik	XP_928195.1	ILMN_1236581	005340519	S	1900	CATGTGACCACGAATATGTAAATAACGTCACCCAAATAACAGTTCAAGGC					PREDICTED: Mus musculus RIKEN cDNA 9430056A22 gene, transcript variant 2 (9430056A22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_186409	ILMN_233774	BRAP	NM_028227.2	NM_028227.2		72399	70608138	NM_028227.2	Brap	NP_082503.2	ILMN_2596880	000780358	S	1997	GGGTCTGCTGGGACCTTTGCTGAGCGGAAGTGTGGGCCCTAATAAGTACG	5	+	122135541-122135590	5qF	Mus musculus BRCA1 associated protein (Brap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence ISO]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence ISO]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus [goid 8139] [evidence ISO]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISO]	3010002G07Rik	3010002G07Rik
Mus musculus	MEEBO	ILMN_191349	ILMN_191349	SCL000078.1_211_REVCOMP	scl000078.1_211_REVCOMP						scl000078.1_211_REVCOMP		ILMN_2478342	007380754	S	3	GCCAAGACCTTAATTCAGCCAGACTTGGTCAATTCTATCAAAACTAGACA										
Mus musculus	RefSeq	ILMN_219062	ILMN_219062	OLFR107	NM_146511.1	NM_146511.1		258504	33239257	NM_146511.1	Olfr107	NP_666722.1	ILMN_1247423	000110047	S	571	CTCAGTGAGGGCCTGATGATGGCTTTGTCTGGAGTTTTGGGAATGAGCTC	17	+	37543065-37543114	17qB1	Mus musculus olfactory receptor 107 (Olfr107), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR156-3	MOR156-3
Mus musculus	RefSeq	ILMN_218453	ILMN_310755	ITGAM	NM_001082960.1	NM_001082960.1		16409	132626288	NM_001082960.1	Itgam	NP_001076429.1	ILMN_2696017	000290204	S	3522	AGGACATGATGAATGAAGCTGCCCCCCAAGACGCCCCACCTCAGTAACGG	7	+	135260845-135260891:135260892-135260894	7qF3	Mus musculus integrin alpha M (Itgam), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]; The migration of leukocytes from the blood vessels into the surrounding tissue [goid 45123] [evidence IMP]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a heparan sulfate proteoglycan, any proteoglycan containing heparan sulfate as the glycosaminoglycan carbohydrate unit [goid 43395] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with an opsonin, such as a complement component or antibody, deposited on the surface of a bacteria, virus, immune complex, or other particulate material [goid 1846] [evidence IDA]; Interacting selectively with an opsonin, such as a complement component or antibody, deposited on the surface of a bacteria, virus, immune complex, or other particulate material [goid 1846] [evidence IMP]	Mac-1; CR3; Mac-1a; F730045J24Rik; CR3A; Ly-40; CD11b/CD18; Cd11b	Mac-1; CR3; Mac-1a; F730045J24Rik; CR3A; Ly-40; CD11b/CD18; Cd11b
Mus musculus	RefSeq	ILMN_200153	ILMN_200153	LOC385816	XM_358956.1	XM_358956.1			38080720	XM_358956.1	LOC385816		ILMN_1241219	001580241	S	2156	AGAGGACCCACCAAGAACCAGATGCAGACAGAGGAGCGATGGAGCATCAC										
Mus musculus	RefSeq	ILMN_221275	ILMN_221275	RPS3A	NM_016959.2	NM_016959.2		20091	31980668	NM_016959.2	Rps3a	NP_058655.2	ILMN_2733330	005390743	S	521	AGAAGATGATGGAAATCATGACCCGAGAGGTGCAGACTAATGACTTGAAG	3	-	86224983-86225032	3qF1	Mus musculus ribosomal protein S3a (Rps3a), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC117914; MGC102469	MGC117914; MGC102469
Mus musculus	RefSeq	ILMN_259837	ILMN_259837	IHPK2	NM_029634.1	NM_029634.1		76500	58037446	NM_029634.1	Ihpk2	NP_083910.1	ILMN_3055507	007550441	I	1338	GACCTCTCCGAAGAGTCGGCTGATGAGTCTGCCGGTGCCTATGCCTACAA	9	+	108708160-108708209	9qF2	Mus musculus inositol hexaphosphate kinase 2 (Ihpk2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AW050208; 1500005N04Rik	AW050208; 1500005N04Rik
Mus musculus	RefSeq	ILMN_259837	ILMN_259837	IHPK2	NM_029634.1	NM_029634.1		76500	58037446	NM_029634.1	Ihpk2	NP_083910.1	ILMN_3132262	004070358	A	1469	GGTGCATGAGGGCCAGGATGCTGGCTATATCTTTGGGCTGCAGAGCCTGA	9	+	108708291-108708340	9qF2	Mus musculus inositol hexaphosphate kinase 2 (Ihpk2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AW050208; 1500005N04Rik	AW050208; 1500005N04Rik
Mus musculus	RefSeq	ILMN_222773	ILMN_259837	IHPK2	NM_029634.1	NM_029634.1		76500	58037446	NM_029634.1	Ihpk2	NP_083910.1	ILMN_2754506	007330093	S	1208	GCTAACTGAGCTCAAGGCCGTGTTGGAGCGACAGGAATCCTACCGCTTCT	9	+	108708030-108708079	9qF2	Mus musculus inositol hexaphosphate kinase 2 (Ihpk2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AW050208; 1500005N04Rik	AW050208; 1500005N04Rik
Mus musculus	RefSeq	ILMN_198325	ILMN_198325	LOC225139	XM_123251.3	XM_123251.3			38083866	XM_123251.3	LOC225139		ILMN_2531285	002510035	S	5	CTTTAGATAGGCTTGCACCAGGGACTGAAGACCCTGTGAATCAGAGAGCC										
Mus musculus	RefSeq	ILMN_193042	ILMN_231883	1700020N18RIK	XM_976173.1	XM_976173.1		67086	94364085	XM_976173.1	1700020N18Rik	XP_981267.1	ILMN_1245336	002710164	S	472	GCCAGCACTCGACCCTTGCTCTTTCTCCTGTAGCTTTGCCTTGGCTCAAG				1qD	PREDICTED: Mus musculus RIKEN cDNA 1700020N18 gene (1700020N18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211908	ILMN_211908	OLFR1032	NM_146579.2	NM_146579.2		258572	148226892	NM_146579.2	Olfr1032	NP_666790.2	ILMN_2620637	007570376	S	601	GCAGGCATTAACTTCACATATTCACTTTCTGTAGTCATCATCTCCTACCT				2qD	Mus musculus olfactory receptor 1032 (Olfr1032), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR199-1	MOR199-1
Mus musculus	RefSeq	ILMN_227947	ILMN_227947	RDH11	NM_021557.2	NM_021557.2		17252	19482171	NM_021557.2	Rdh11	NP_067532.2	ILMN_2899318	000650411	S	2930	CTTTGGGGGTATGCTCTCCTGAAATGTTGAGGCCCCTGGGTTTGATCCCA	12	-	80093459-80093508	12qC3	Mus musculus retinol dehydrogenase 11 (Rdh11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ube-1c; Arsdr1; HCBP12; C85936; AU045252; Mdt1; UBE-1c1; SCALD; Psdr1; AI428145; M42C60; 2610319N22Rik; CGI-82	Ube-1c; Arsdr1; HCBP12; C85936; AU045252; Mdt1; UBE-1c1; SCALD; Psdr1; AI428145; M42C60; 2610319N22Rik; CGI-82
Mus musculus	RefSeq	ILMN_197423	ILMN_197423	LOC381422	XM_358573.1	XM_358573.1			38075686	XM_358573.1	LOC381422		ILMN_1239388	001110608	S	310	CTGGAAAAGGATTGGCCCAGACTGGAACCACTGGGCTGCATCTCTACAGC										
Mus musculus	RefSeq	ILMN_221539	ILMN_221539	BCDIN3D	NM_029236.1	NM_029236.1		75284	21312917	NM_029236.1	Bcdin3d	NP_083512.1	ILMN_2736925	002630609	S	844	CCACGAGACTCAGGCAATCCCCGAATCGTCAACAAAAGAGACACGGACAG	15	-	99300891-99300940	15qF1	Mus musculus BCDIN3 domain containing (Bcdin3d), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	4930556P03Rik; AV138748	4930556P03Rik; AV138748
Mus musculus	MEEBO	ILMN_222745	ILMN_222745	H2-Q7	scl015018.6_2	XM_359282.1			38083090	XM_359282.1	H2-Q7		ILMN_2754167	001980037	S	840	TTTGGGGAGGAGCAGAATTACACATGCCATGTGCACCATGAGGGGCTGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]			
Mus musculus	Riken	ILMN_206729	ILMN_206729	SLIT2	ri|D130076F04|PX00186D03|AK084012|3209					AK084012	Slit2		ILMN_1232381	000940224	S	2857	GGGTCCTCTGTTGAATGGAGAGGCACTTGGTGTTTGGTGCTGTAGCCCTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]		
Mus musculus	RefSeq	ILMN_212712	ILMN_212712	PTPRN	NM_008985.2	NM_008985.2		19275	116089338	NM_008985.2	Ptprn	NP_033011.2	ILMN_2629455	000270521	S	3341	CCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAAACCC	1	-	75243760-75243809	1qC3	Mus musculus protein tyrosine phosphatase, receptor type, N (Ptprn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [evidence TAS]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence TAS]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	mKIAA4064; IA-2; KIAA4064; mIA-A	mKIAA4064; IA-2; KIAA4064; mIA-A
Mus musculus	RefSeq	ILMN_191891	ILMN_191891	TNNI3	NM_009406.3	NM_009406.3		21954	142373266	NM_009406.3	Tnni3	NP_033432.1	ILMN_3163526	005260450	A	657	GTGAAGAAGGAGGACATTGAGAAGGAAAACCGGGAGGTGGGAGACTGGCG	7	-	4470027-4470053:4471000-4471022	7qA1	Mus musculus troponin I, cardiac 3 (Tnni3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence ISO]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IDA]; The process that modulates blood pressure by the detection of carbon dioxide levels in the brain stem. Increased levels activate the sympathetic vasoconstrictor mechanism increasing the force with which blood flows through the circulatory system [goid 1980] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IDA]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Tn1; cTnI	Tn1; cTnI
Mus musculus	Riken	ILMN_205000	ILMN_205000	9530031H08RIK	ri|9530031H08|PX00112E22|AK035401|2659					AK035401	9530031H08Rik		ILMN_1246046	005570707	S	2289	GGTCATTCAGTGTGTTTACACCGTAGTCCTGGGTGGCTCACTTTCTTCCC										
Mus musculus	RefSeq	ILMN_220063	ILMN_245369	4930546H06RIK	NM_029205.2	NM_029205.2		75202	141802652	NM_029205.2	4930546H06Rik	NP_083481.1	ILMN_2717117	000580075	S	866	CTATTCCTGCTCGCGGCCACCGCTGCACTTGGGTCTGCCAGTGTTACTCT	17	+	17975432-17975481	17qA3.2	Mus musculus RIKEN cDNA 4930546H06 gene (4930546H06Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			B230206P06Rik	B230206P06Rik
Mus musculus	MEEBO	ILMN_211049	ILMN_211049	C230086A09RIK	scl47398.10.1_131	NM_177123.2			31342854	NM_177123.2	C230086A09Rik		ILMN_2611952	005130259	S	1328	CTTACTCGATAGCAAAGATTATGAAGATTATAAGGTACATACTAATATGT										
Mus musculus	RefSeq	ILMN_210002	ILMN_210002	RAD51L1	NM_009014.2	NM_009014.2		19363	31982071	NM_009014.2	Rad51l1	NP_033040.2	ILMN_2966766	005960278	S	1653	TCGATGGCCTCAGAACTCGCTGACAGGCTCAGACCTCACTTCGGAGCAGA	12	+	80733325-80733374	12qC3	Mus musculus RAD51-like 1 (S. cerevisiae) (Rad51l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	mREC2; R51H2; AI553500; Rad51b	mREC2; R51H2; AI553500; Rad51b
Mus musculus	Riken	ILMN_203356	ILMN_203356	C430009E20RIK	ri|C430009E20|PX00078B09|AK049433|3592					AK049433	C430009E20Rik		ILMN_2556685	006590092	S	1870	CCTAGTGCTCCCTTTAATACAGTTACTCACGTTACAGTGACCCCCCCACC										
Mus musculus	Riken	ILMN_206231	ILMN_206231	D130098J21RIK	ri|D130098J21|PX00187C06|AK084134|1673					AK084134	D130098J21Rik		ILMN_2578565	007160576	S	1437	GCTCTGTGCTGTGTGGCAGAGGCTGAATTTTGTCTGAAAGATGAGAGGCG										
Mus musculus	RefSeq	ILMN_184571	ILMN_257629	ZFP383	XM_001002189.1	XM_001002189.1		73729	94379825	XM_001002189.1	Zfp383	XP_001002189.1	ILMN_1214658	006960653	S	2499	GTGTACGTATTGGTTTGCCATGAGAACTCAATGAACTCATAAATAGAACT					PREDICTED: Mus musculus zinc finger protein 383, transcript variant 3 (Zfp383), mRNA.					
Mus musculus	Riken	ILMN_205893	ILMN_205893	A730094H17RIK	ri|A730094H17|PX00153C13|AK043421|1196					AK043421	A730094H17Rik		ILMN_2575994	002350079	S	982	GTGAGGCAGAAGAGGTGTGGATCTCTGTGAGCTTGAAGCCAGCTTGGTCT										
Mus musculus	Riken	ILMN_205330	ILMN_205330	A330073P05RIK	ri|A330073P05|PX00132F23|AK039617|1855					AK039617	A330073P05Rik		ILMN_2571733	005910152	S	1016	GAAGCCTGAGCCGGTCTCACACAACTTGGGGCCTGCATGATGCCTGAAGA										
Mus musculus	RefSeq	ILMN_211869	ILMN_211869	SLITRK6	NM_175499.3	NM_175499.3		239250	142365695	NM_175499.3	Slitrk6	NP_780708.1	ILMN_2620270	001570494	S	3537	GTGCACCATTAACGATTCCGAATTTTCAACAAAGGGTGCCATTGCTAAGG	14	-	111148377-111148426	14qE3	Mus musculus SLIT and NTRK-like family, member 6 (Slitrk6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4832410J21Rik; Sltk6	4832410J21Rik; Sltk6
Mus musculus	RefSeq	ILMN_204023	ILMN_330163	LOC100045340	XM_001474145.1	XM_001474145.1		100045340	149260587	XM_001474145.1	LOC100045340	XP_001474195.1	ILMN_1245803	007210768	S	1086	CTAAGATAATTCCCCAGCATTGCCCAGTTGTTAGTGTCGGTGCTACCCCC					PREDICTED: Mus musculus hypothetical protein LOC100045340 (LOC100045340), mRNA.					
Mus musculus	RefSeq	ILMN_210318	ILMN_230997	CELSR2	NM_001004177.2	NM_001004177.2		53883	114050896	NM_001004177.2	Celsr2	NP_001004177.2	ILMN_1254576	000520743	S	5936	CCATAGAGGCTGGGATCTGGTGGCCCCGCACGCGGTTCGGGCTACCTGCT	3	-	108202562-108202611	3qF3	Mus musculus cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila) (Celsr2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the DNA-dependent transcription of a specific gene or genes [goid 32583] [evidence IDA]; The process that regulates the coordinated growth and differentiation that establishes the non-random anterior-posterior spatial arrangement of the neural plate [goid 21999] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mKIAA0279; Flamingo1; mfmi1; KIAA0279; EGFL2	mKIAA0279; Flamingo1; mfmi1; KIAA0279; EGFL2
Mus musculus	RefSeq	ILMN_198977	ILMN_253548	OLFR149	NM_207138.1	NM_207138.1		235256	54261731	NM_207138.1	Olfr149	NP_997021.1	ILMN_1254213	007550411	S	648	CAGCTGTATAGTTCGGTCCATCCTACAGATCCGCTCCACTGAGGGTCGAC	9	-	39509655-39509704	9qA5.1	Mus musculus olfactory receptor 149 (Olfr149), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	M31; MOR224-8	M31; MOR224-8
Mus musculus	RefSeq	ILMN_253548	ILMN_253548	OLFR149	NM_207138.1	NM_207138.1		235256	54261731	NM_207138.1	Olfr149	NP_997021.1	ILMN_2938420	006200681	S	770	ATCTAAGGCCAACACCAAGTCCTTGGTTGGATGCAACTGTTCAGATTCTG	9	-	39509533-39509582	9qA5.1	Mus musculus olfactory receptor 149 (Olfr149), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	M31; MOR224-8	M31; MOR224-8
Mus musculus	RefSeq	ILMN_214619	ILMN_214619	ACO1	NM_007386.2	NM_007386.2		11428	110347486	NM_007386.2	Aco1	NP_031412.2	ILMN_1216382	006400707	S	3181	ATCTGGATTCTAGAATCACGGGAAGGTCCGTAGTACCAAAGAGAACTCGC	4	+	40144904-40144953	4qA5	Mus musculus aconitase 1 (Aco1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; Any process by which nutrients are taken up from the contents of the intestine [goid 50892] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IGI]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IGI]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with the iron-responsive element, a regulatory sequence found in the 5'- and 3'-untranslated regions of mRNAs encoding many iron-binding proteins [goid 30350] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: citrate = cis-aconitate + H2O = isocitrate; i.e. the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate [goid 3994] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with the iron-responsive element, a regulatory sequence found in the 5'- and 3'-untranslated regions of mRNAs encoding many iron-binding proteins [goid 30350] [evidence IDA]	Irp1; Aco-1; Irebp; AI256519	Irp1; Aco-1; Irebp; AI256519
Mus musculus	RefSeq	ILMN_194269	ILMN_237951	LTBP3	NM_008520.2	NM_008520.2		16998	124487414	NM_008520.2	Ltbp3	NP_032546.2	ILMN_2776619	004250692	S	4940	GCTTTATCCCCAAGGGTGATTCCTAGAAACTTCGACATCAGATCTGCCCC	19	+	5758282-5758331	19qA	Mus musculus latent transforming growth factor beta binding protein 3 (Ltbp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence ISA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IPI]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ltbp2; mFLJ00070	Ltbp2; mFLJ00070
Mus musculus	RefSeq	ILMN_194269	ILMN_237951	LTBP3	NM_008520.2	NM_008520.2		16998	124487414	NM_008520.2	Ltbp3	NP_032546.2	ILMN_2608746	002750170	S	3382	CGAACACACCAGGCTCTTTCCAGTGTCAGTGCCTCTCCGGCTATCATCTG	19	+	5753682-5753731	19qA	Mus musculus latent transforming growth factor beta binding protein 3 (Ltbp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence ISA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IPI]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ltbp2; mFLJ00070	Ltbp2; mFLJ00070
Mus musculus	RefSeq	ILMN_209519	ILMN_209519	1700113I22RIK	NM_026865.2	NM_026865.2		73635	118130264	NM_026865.2	1700113I22Rik	NP_081141.1	ILMN_2596569	005960097	S	1173	GGATGGTGCCTTCTTCAACTACTTGGTTTGCATCAAGATCCACAGAGACC	11	-	101280366-101280415	11qD	Mus musculus RIKEN cDNA 1700113I22 gene (1700113I22Rik), mRNA.				1110069E20Rik	1110069E20Rik
Mus musculus	RefSeq	ILMN_209519	ILMN_209519	1700113I22RIK	NM_026865.2	NM_026865.2		73635	118130264	NM_026865.2	1700113I22Rik	NP_081141.1	ILMN_2662036	003120142	S	772	TTTGCGTTGAGGACAGCACCGACGTCAGTGTGCTCATTGAGGACCACCGC	11	-	101285479-101285528	11qD	Mus musculus RIKEN cDNA 1700113I22 gene (1700113I22Rik), mRNA.				1110069E20Rik	1110069E20Rik
Mus musculus	MEEBO	ILMN_196182	ILMN_196182	D930014N22RIK	scl0320689.1_82						D930014N22Rik		ILMN_2522345	005220241	S	2	GCTTAGCCATCACACGTCCAATGATGGGCAGTAGTAGTAACTCATGTCCC										
Mus musculus	RefSeq	ILMN_219011	ILMN_219011	CHD8	NM_201637.2	NM_201637.2		67772	119392063	NM_201637.2	Chd8	NP_963999.2	ILMN_2703082	003520228	S	8044	CCAGACGCCTCCATTAACCACAGACTATGTAGCGCTGGCCCTAGCCTCTG	14	-	52817922-52817971	14qC2	Mus musculus chromodomain helicase DNA binding protein 8 (Chd8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1564; Duplin; 5830451P18Rik; HELSNF1; AU015341	mKIAA1564; Duplin; 5830451P18Rik; HELSNF1; AU015341
Mus musculus	RefSeq	ILMN_210783	ILMN_259041	LOC630527	XM_925747.3	XM_925747.3		630527	149251835	XM_925747.3	LOC630527	XP_930840.2	ILMN_2777405	002030255	S	476	AAGGTGATAAGATAGCAATATGGACTACTGAGTGTGAAAACAGAGATGCA					PREDICTED: Mus musculus similar to eIF-4E (LOC630527), mRNA.					
Mus musculus	RefSeq	ILMN_221220	ILMN_221220	KPTN	NM_133727.1	NM_133727.1		70394	19526915	NM_133727.1	Kptn	NP_598488.1	ILMN_2732642	004250603	S	1359	CAGGTGTGGGCACCTCGTATCTATCATTGTTGATGGGGAGCGAAGCATCT	7	+	16712607-16712656	7qA2	Mus musculus kaptin (Kptn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	2310042D10Rik; 2E4; C030013F01Rik	2310042D10Rik; 2E4; C030013F01Rik
Mus musculus	RefSeq	ILMN_221245	ILMN_221245	EPHA8	NM_007939.1	NM_007939.1		13842	6679662	NM_007939.1	Epha8	NP_031965.1	ILMN_2895412	004210598	S	4525	CCTATGGAAGTGGGAAACATGGTCAGGACACGAGGGGTGGGGACACCTTG	4	-	136485474-136485523	4qD3	Mus musculus Eph receptor A8 (Epha8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	KIAA1459; Hek3; mKIAA1459; AW047546; Eek	KIAA1459; Hek3; mKIAA1459; AW047546; Eek
Mus musculus	RefSeq	ILMN_218195	ILMN_218195	SLC25A31	NM_178386.2	NM_178386.2		73333	31341621	NM_178386.2	Slc25a31	NP_848473.1	ILMN_1234063	000130379	S	355	GCCTTAAACTTCGCTTTTAAGGACAAATACAAAGAACTTTTCATGTCTGG	3	+	40520497-40520546	3qB	Mus musculus solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 (Slc25a31), nuclear gene encoding mitochondrial protein, mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Sfec; 1700034J06Rik	Sfec; 1700034J06Rik
Mus musculus	RefSeq	ILMN_218195	ILMN_218195	SLC25A31	NM_178386.2	NM_178386.2		73333	31341621	NM_178386.2	Slc25a31	NP_848473.1	ILMN_1228264	005490370	S	1367	ATTGTATGACCAATAGTTGAAAAGTTGATAATGACTTAGTGACACTATCA	3	+	40529334-40529383	3qB	Mus musculus solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 (Slc25a31), nuclear gene encoding mitochondrial protein, mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Sfec; 1700034J06Rik	Sfec; 1700034J06Rik
Mus musculus	RefSeq	ILMN_222343	ILMN_222343	PLA2G3	NM_172791.1	NM_172791.1		237625	27370177	NM_172791.1	Pla2g3	NP_766379.1	ILMN_1240081	000730072	S	2027	CCAGAGAGTTAGCGTCTTACACTCTAGAAATGCCTCCTTTTACTTTGGCA	11	+	3398772-3398821	11qA1	Mus musculus phospholipase A2, group III (Pla2g3), mRNA.				9130003P18Rik	9130003P18Rik
Mus musculus	MEEBO	ILMN_187888	ILMN_187888	4930522L14RIK	scl078020.3_12						4930522L14Rik		ILMN_1239588	001820435	S	15	CCCTGTTCACTGCTCTCTGTCATGCCACTGAATGCTGTTTAGGGTGCTCA										
Mus musculus	Riken	ILMN_201893	ILMN_201893	4933406L05RIK	ri|4933406L05|PX00019L14|AK016700|1379					AK016700	4933406L05Rik		ILMN_2545424	003780129	S	1011	ATGATCCACGAGGGGAGGCTGAGGAGGAGCTGGTTGAGGATGAGGATGAG										
Mus musculus	RefSeq	ILMN_210377	ILMN_210377	SEC14L4	NM_146013.1	NM_146013.1		103655	22165367	NM_146013.1	Sec14l4	NP_666125.1	ILMN_2605013	001030167	S	2180	CGTCTGCATGTCTAAGGAGAGAGTTGAAGCTGCCAACATCACTTCCCGTG	11	+	3947250-3947299	11qA1	Mus musculus SEC14-like 4 (S. cerevisiae) (Sec14l4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC30313; AI256582; TAP; AW536553; SPF	MGC30313; AI256582; TAP; AW536553; SPF
Mus musculus	RefSeq	ILMN_210377	ILMN_210377	SEC14L4	NM_146013.1	NM_146013.1		103655	22165367	NM_146013.1	Sec14l4	NP_666125.1	ILMN_2837447	001580768	S	2760	TGGAGAAAAACAGTAAACCTGGAAGATGAGGGAGCTCTTCAGAGGAGCCC	11	+	3947830-3947879	11qA1	Mus musculus SEC14-like 4 (S. cerevisiae) (Sec14l4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC30313; AI256582; TAP; AW536553; SPF	MGC30313; AI256582; TAP; AW536553; SPF
Mus musculus	RefSeq	ILMN_210621	ILMN_210621	ABCD4	NM_008992.1	NM_008992.1		19300	6680613	NM_008992.1	Abcd4	NP_033018.1	ILMN_2607474	001240678	S	1409	CCACGGGGTGCTGTTCCTGCCTCAGAAGCCATTCTTCACTGATGGGACAC	12	-	85946832-85946881	12qD1	Mus musculus ATP-binding cassette, sub-family D (ALD), member 4 (Abcd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	P69r; P70R; Pxmp1l	P69r; P70R; Pxmp1l
Mus musculus	RefSeq	ILMN_210621	ILMN_210621	ABCD4	NM_008992.1	NM_008992.1		19300	6680613	NM_008992.1	Abcd4	NP_033018.1	ILMN_2981792	004560390	S	1925	ACAGACAAGGAAGCCCGATGAGCCGGGAAGGAGCCACAGATTCACCTGAG	12	-	85943937-85943986	12qD1	Mus musculus ATP-binding cassette, sub-family D (ALD), member 4 (Abcd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	P69r; P70R; Pxmp1l	P69r; P70R; Pxmp1l
Mus musculus	Riken	ILMN_203813	ILMN_203813	TSN	ri|6720490E18|PX00060D22|AK033003|2998					AK033003	Tsn		ILMN_2560171	004120523	S	1240	TTGGTGTGTGAGGACTTACAGGAAAAGTAGCTGAGGACTAATGGCCTCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199380	ILMN_199380	PRL2C4	NM_011954.2	NM_011954.2		26421	42476177	NM_011954.2	Prl2c4	NP_036084.2	ILMN_2996648	006590435	S	1	AAGAGGTAATCCATCTTCCCGGAATCCACAGCTAAGCCTGGGTAGGACTC	13	-	12855137-12855186		Mus musculus prolactin family 2, subfamily c, member 4 (Prl2c4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	mrp/plf3; MRP-3; Mrpplf3; PLF-3	mrp/plf3; MRP-3; Mrpplf3; PLF-3
Mus musculus	RefSeq	ILMN_213352	ILMN_213352	TBC1D9	NM_027758.1	NM_027758.1		71310	30794403	NM_027758.1	Tbc1d9	NP_082034.1	ILMN_2920541	006520196	S	4194	GACTGTTTGTAGAAGGAAGGGGCATTGTGAGCTGGGGTAAAATCTCGAAG	8	+	86162090-86162139	8qC2	Mus musculus TBC1 domain family, member 9 (Tbc1d9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AI847101; AW490653; 4933431N12Rik; C76116	AI847101; AW490653; 4933431N12Rik; C76116
Mus musculus	MEEBO	ILMN_187618	ILMN_187618	C030033M12RIK	scl9432.1.1_2						C030033M12Rik		ILMN_2445666	001170722	S	20	TACTGCACATGCCAATGAGGTGCACAAAGATCTGCAATGGTGACGCTGAG										
Mus musculus	RefSeq	ILMN_190236	ILMN_237973	RNF123	NM_032543.1	NM_032543.1		84585	54027903	NM_032543.1	Rnf123	NP_115932.1	ILMN_2468369	004120148	S	2754	TCGAGACTCACTGATGCAGGCCCTGGCCAGCTATGTGTGCTACCCACACT	9	-	107960873-107960922	9qF2	Mus musculus ring finger protein 123 (Rnf123), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Kpc1; BC003945	Kpc1; BC003945
Mus musculus	RefSeq	ILMN_212952	ILMN_237973	RNF123	NM_032543.1	NM_032543.1		84585	54027903	NM_032543.1	Rnf123	NP_115932.1	ILMN_1226216	002190608	S	3360	CCGGGTGACAGCTGAGAGGAACCTGTTTGACCGTGTAGTTACCCTACGGC	9	-	107958693-107958742	9qF2	Mus musculus ring finger protein 123 (Rnf123), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Kpc1; BC003945	Kpc1; BC003945
Mus musculus	RefSeq	ILMN_237973	ILMN_237973	RNF123	NM_032543.1	NM_032543.1		84585	54027903	NM_032543.1	Rnf123	NP_115932.1	ILMN_2975900	002000048	S	3651	TTATATCAGCGCTGAGGAGCTGGCCCAGGTGGAACAGATGCTGGCTCACC	9	-	107954582-107954631	9qF2	Mus musculus ring finger protein 123 (Rnf123), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Kpc1; BC003945	Kpc1; BC003945
Mus musculus	RefSeq	ILMN_219496	ILMN_219496	MESDC2	NM_023403.2	NM_023403.2		67943	31543246	NM_023403.2	Mesdc2	NP_075892.2	ILMN_2709604	006040673	S	3678	GTAGCCCTCCCCCAAATTATATATCCCTAAAAGTGCTTTAACACCCAAAC	7	+	91048770-91048819	7qD3	Mus musculus mesoderm development candidate 2 (Mesdc2), mRNA.		The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence NAS]		mKIAA0081; 2210015O11Rik; AW537813; MGC25959	mKIAA0081; 2210015O11Rik; AW537813; MGC25959
Mus musculus	RefSeq	ILMN_191520	ILMN_191520	UBQLN1	NM_152234.1	NM_152234.1		56085	22726190	NM_152234.1	Ubqln1	NP_689420.1	ILMN_2479786	003940296	S	1065	TCGAACAGAAAATAGGGATCCGCTCCCCAACCCGTGGGCTCCGCAGACTT	13	-	58293211-58293260	13qB1	Mus musculus ubiquilin 1 (Ubqln1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space [goid 19215] [evidence NAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence NAS]	1110046H03Rik; D13Ertd372e; C77538; DA41; XDRP1; Plic-1; Dsk2; AU019746; 1810030E05Rik	1110046H03Rik; D13Ertd372e; C77538; DA41; XDRP1; Plic-1; Dsk2; AU019746; 1810030E05Rik
Mus musculus	RefSeq	ILMN_191520	ILMN_191520	UBQLN1	NM_152234.1	NM_152234.1		56085	22726190	NM_152234.1	Ubqln1	NP_689420.1	ILMN_2482555	006100180	S	921	TATTCCTGGGGGCTATAATGCCTTACGGCGCATGTACACCGATATCCAGG	13	-	58293466-58293515	13qB1	Mus musculus ubiquilin 1 (Ubqln1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space [goid 19215] [evidence NAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence NAS]	1110046H03Rik; D13Ertd372e; C77538; DA41; XDRP1; Plic-1; Dsk2; AU019746; 1810030E05Rik	1110046H03Rik; D13Ertd372e; C77538; DA41; XDRP1; Plic-1; Dsk2; AU019746; 1810030E05Rik
Mus musculus	RefSeq	ILMN_222940	ILMN_233166	AY761184	NM_001007582.1	NM_001007582.1		382000	57222283	NM_001007582.1	AY761184	NP_001007583.1	ILMN_2757031	000050315	S	130	GAAGAGACTAAAACTGGGGAGCAGCCAGAGGAAGAGGACCAGGCTGTTTC	8	-	22813940-22813989	8qA2	Mus musculus cDNA sequence AY761184 (AY761184), mRNA.		Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]		CRS1C-3	CRS1C-3
Mus musculus	MEEBO	ILMN_194836	ILMN_194836	HPAP	HPAP						HPAP		ILMN_1241048	004890414	S	3	ACACGGTCCTCCTATACGGAAACGGTCCAGGCTATGTGCTCAAGGACGGC										
Mus musculus	RefSeq	ILMN_218551	ILMN_218551	ASTN1	NM_007495.2	NM_007495.2		11899	46488925	NM_007495.2	Astn1	NP_031521.2	ILMN_2697205	006660184	S	6838	GTCCAGCTGAGATCTCTATTGTTTCCTCTTGAATGTCCACGAACCACTGT	1	+	160621607-160621656	1qH1	Mus musculus astrotactin 1 (Astn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Astn; mKIAA0289; GC14	Astn; mKIAA0289; GC14
Mus musculus	RefSeq	ILMN_218551	ILMN_218551	ASTN1	NM_007495.2	NM_007495.2		11899	46488925	NM_007495.2	Astn1	NP_031521.2	ILMN_2727272	000270440	S	7048	CAACTTCAACTACAACAGTGTTGTTTAAGAGATTTATTGTACGATTATGA	1	+	160621817-160621866	1qH1	Mus musculus astrotactin 1 (Astn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Astn; mKIAA0289; GC14	Astn; mKIAA0289; GC14
Mus musculus	RefSeq	ILMN_223134	ILMN_223134	MSX1	NM_010835.2	NM_010835.2		17701	113199782	NM_010835.2	Msx1	NP_034965.2	ILMN_1246173	005670739	S	1292	GCTACACACTTCCTCCTGGTTGTCGCTTCCTAAACCTTCCTCATCTGACC	5	-	38212319-38212368	5qB3	Mus musculus homeobox, msh-like 1 (Msx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Hox7.1; Hox-7; msh; AA675338; AI324650; Hox7	Hox7.1; Hox-7; msh; AA675338; AI324650; Hox7
Mus musculus	RefSeq	ILMN_186695	ILMN_236030	ANK2	NM_001034168.1	NM_001034168.1		109676	77681980	NM_001034168.1	Ank2	NP_001029340.1	ILMN_2718030	003890678	S	4446	CGCCATGTCTGCTCTTCAGCTTGCAGATGAGATTTTGGGAAATCCTTGGA	3	-	126625496-126625545	3qG2	Mus musculus ankyrin 2, brain (Ank2), transcript variant 3, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		AW491075; Ankyrin-B; Ank-2; ankyrin>B<; AI835472; ankyrin B; Ankyrin-2	AW491075; Ankyrin-B; Ank-2; ankyrin>B<; AI835472; ankyrin B; Ankyrin-2
Mus musculus	RefSeq	ILMN_190610	ILMN_256040	GLA	NM_013463.2	NM_013463.2		11605	133778923	NM_013463.2	Gla	NP_038491.2	ILMN_2626086	006040465	S	2477	AAAACAAGGGATGTATATTGAAGCATGCTCCCCAGACTCCCTTAATGCCT	X	-	131123213-131123262	XqE3	Mus musculus galactosidase, alpha (Gla), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group [goid 46477] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group [goid 46477] [evidence IDA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group [goid 46477] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group [goid 46477] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactohydrolase [goid 4557] [evidence IDA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactohydrolase [goid 4557] [evidence IMP]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactohydrolase [goid 4557] [evidence IDA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]	Ags	Ags
Mus musculus	MEEBO	ILMN_192487	ILMN_192487	20198505_4692_RC	20198505_4692_rc						20198505_4692_rc		ILMN_2488532	005890491	S	20	AAGGTGTGCTTGTACATGACGAAGCTGTGGGTCATGTTCCGCGGCACGCG										
Mus musculus	MEEBO	ILMN_186790	ILMN_186790	8030451K01RIK	scl22163.1_255				27369691	NM_172501	8030451K01Rik		ILMN_2438516	006940593	S	11	GGAACTCTTGAAACCTCTGCCTCCTAGGCTTATTCTTGACACAGAGGGGA										
Mus musculus	Riken	ILMN_205152	ILMN_205152	A130095C03RIK	ri|A130095C03|PX00125L24|AK038312|3514					AK038312	A130095C03Rik		ILMN_1250695	002470497	S	3302	TGGTTATGCAAGCCTTTGTGGGGCTGCCTGTAGTGGAGGAGAGGTCTTGG										
Mus musculus	RefSeq	ILMN_228818	ILMN_228818	NFIX	NM_001081981.1	NM_001081981.1		18032	126517473	NM_001081981.1	Nfix	NP_001075450.1	ILMN_3078175	006450255	I	928	CCTCCCCAAGTCCCACCGCCCTAACTCATAACTCTGTTGAGCCCAGAATC	8	-	87297291-87297340	8qC3	Mus musculus nuclear factor I/X (Nfix), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210548	ILMN_228818	NFIX	NM_001081981.1	NM_001081981.1		18032	126517473	NM_001081981.1	Nfix	NP_001075450.1	ILMN_2606700	005860082	S	2322	CCCCTTCCTATGCCTGATTCCAAAACCACCAGCACGGCCCCAGACGGCGC	8	-	87240059-87240108	8qC3	Mus musculus nuclear factor I/X (Nfix), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210548	ILMN_228818	NFIX	NM_001081981.1	NM_001081981.1		18032	126517473	NM_001081981.1	Nfix	NP_001075450.1	ILMN_2626432	006220280	S	2018	ACGCATGGCTTTCACCCACCACCCGCTGCCTGTGCTTGCTGGAGTCAGAC	8	-	87245717-87245717:87247627-87247675	8qC3	Mus musculus nuclear factor I/X (Nfix), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223202	ILMN_223202	D030056L22RIK	NM_177640.4	NM_177640.4		225995	146198655	NM_177640.4	D030056L22Rik	NP_808308.1	ILMN_2760671	002000291	S	1443	CCTGTGTTGTGCAGATGGGGCCAGAACCACTAGACTAGCAGCCTTTCCTG				19qB	Mus musculus RIKEN cDNA D030056L22 gene (D030056L22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211940	ILMN_211940	CXXC1	NM_028868.3	NM_028868.3		74322	146141090	NM_028868.3	Cxxc1	NP_083144.1	ILMN_2620959	000380187	S	2424	CACCGTCTGTCTCCTCTTTCCATAGTCAGGGCTGGGGTGAGACTCAAACT				18qE2	Mus musculus CXXC finger 1 (PHD domain) (Cxxc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5830420C16Rik; Cgbp; 2410002I16Rik; PHF18; AI426635	5830420C16Rik; Cgbp; 2410002I16Rik; PHF18; AI426635
Mus musculus	RefSeq	ILMN_211940	ILMN_211940	CXXC1	NM_028868.3	NM_028868.3		74322	146141090	NM_028868.3	Cxxc1	NP_083144.1	ILMN_2706251	002480347	S	510	AGATTCGTTACCGCCACAAAAAGTGCCGGGAGAGGGATGGCAGTGAGCGG				18qE2	Mus musculus CXXC finger 1 (PHD domain) (Cxxc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5830420C16Rik; Cgbp; 2410002I16Rik; PHF18; AI426635	5830420C16Rik; Cgbp; 2410002I16Rik; PHF18; AI426635
Mus musculus	Riken	ILMN_203519	ILMN_203519	5031428M13RIK	ri|5031428M13|PX00037J19|AK030317|3441					AK030317	5031428M13Rik		ILMN_1218136	003610044	S	3310	CCAGGTACAAGGAGGGAAGGCTTTAGAGCAATGATTACGTACTGTCGAGG										
Mus musculus	RefSeq	ILMN_193650	ILMN_255403	TMEM65	NM_175212.4	NM_175212.4		74868	119360291	NM_175212.4	Tmem65	NP_780421.2	ILMN_2499166	001580594	S	3576	CTCAGAGGCGCTGGGTTATTCTATGACAGAAGGAAACAGGATCAATGAAT	15	-	58613842-58613891	15qD1	Mus musculus transmembrane protein 65 (Tmem65), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610029O13Rik; 4930438D12Rik	2610029O13Rik; 4930438D12Rik
Mus musculus	RefSeq	ILMN_255403	ILMN_255403	TMEM65	NM_175212.4	NM_175212.4		74868	119360291	NM_175212.4	Tmem65	NP_780421.2	ILMN_2987564	000160519	S	3360	CGGCATCGTGCGCTGCTGTAGTCCTGTCTGTTCAGAATCCATGGTGTTTG	15	-	58614058-58614107	15qD1	Mus musculus transmembrane protein 65 (Tmem65), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610029O13Rik; 4930438D12Rik	2610029O13Rik; 4930438D12Rik
Mus musculus	RefSeq	ILMN_203095	ILMN_255403	TMEM65	NM_175212.4	NM_175212.4		74868	119360291	NM_175212.4	Tmem65	NP_780421.2	ILMN_2554688	005340446	S	1283	CAGTCACTGATACTGTACTGTACTGTACTGTTCTGACTTGGGTTTGCATA	15	-	58616135-58616184	15qD1	Mus musculus transmembrane protein 65 (Tmem65), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610029O13Rik; 4930438D12Rik	2610029O13Rik; 4930438D12Rik
Mus musculus	RefSeq	ILMN_209626	ILMN_209626	LCP2	NM_010696.3	NM_010696.3		16822	118130099	NM_010696.3	Lcp2	NP_034826.2	ILMN_1259461	002600133	S	3122	GACTTTATGATGGCATGGAAGTGATGCTTGTTAAGCACGAACTGTACGTC	11	+	33992054-33992103	11qA4	Mus musculus lymphocyte cytosolic protein 2 (Lcp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IMP]; The regulated release of cytokines from a cell or group of cells. Cytokines are any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 50663] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	twm; AI323664; BB161688; SLP-76	twm; AI323664; BB161688; SLP-76
Mus musculus	RefSeq	ILMN_209626	ILMN_209626	LCP2	NM_010696.3	NM_010696.3		16822	118130099	NM_010696.3	Lcp2	NP_034826.2	ILMN_1231012	005290647	S	2108	CTTTTGTCAGGCCGAGGCATGTTCTGTTTTTTACACAACTTAAAATGATT	11	+	33991040-33991089	11qA4	Mus musculus lymphocyte cytosolic protein 2 (Lcp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IMP]; The regulated release of cytokines from a cell or group of cells. Cytokines are any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 50663] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	twm; AI323664; BB161688; SLP-76	twm; AI323664; BB161688; SLP-76
Mus musculus	RefSeq	ILMN_200444	ILMN_200444	LOC384293	XM_357549.1	XM_357549.1			38081975	XM_357549.1	LOC384293		ILMN_1241968	002600767	S	268	GAAGAAGAGGTTGCTGATTCGCCACAGTGGGCATTGCCAGAGCAGACACC										
Mus musculus	RefSeq	ILMN_198308	ILMN_198308	LOC381157	XM_355079.1	XM_355079.1			38083767	XM_355079.1	LOC381157		ILMN_1248460	007610750	S	5091	CTTCAGTGGACTCCTCCTGTACCTCTGCGACTCTTTTGTAGGTGCTACCC										
Mus musculus	RefSeq	ILMN_208955	ILMN_208955	IL27RA	NM_016671.2	NM_016671.2		50931	31980646	NM_016671.2	Il27ra	NP_057880.1	ILMN_2591156	004040315	S	1908	GTCTGATCTGCTTACGGCTAGGGGCTGTACCCCTATCTTGGGCTAGACGT	8	-	86554885-86554929:86554930-86554934	8qC3	Mus musculus interleukin 27 receptor, alpha (Il27ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a T-helper 2 type immune response [goid 2829] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a T-helper 1 type immune response [goid 2827] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IMP]; Any process that modulates the frequency, rate or extent of isotype switching to IgG isotypes [goid 48302] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with interleukin-27 to initiate a change in cell activity [goid 45509] [evidence IDA]	Tccr; WSX-1; IL-27R; zcytor1; Wsx1; CRL1	Tccr; WSX-1; IL-27R; zcytor1; Wsx1; CRL1
Mus musculus	RefSeq	ILMN_208955	ILMN_208955	IL27RA	NM_016671.2	NM_016671.2		50931	31980646	NM_016671.2	Il27ra	NP_057880.1	ILMN_3002095	006620446	S	2505	ACTCCAGGTCCAAGGAATCCAATGCCCTCTTCTGGCTTCTGTGAGCCCCG	8	-	86554288-86554337	8qC3	Mus musculus interleukin 27 receptor, alpha (Il27ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a T-helper 2 type immune response [goid 2829] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a T-helper 1 type immune response [goid 2827] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IMP]; Any process that modulates the frequency, rate or extent of isotype switching to IgG isotypes [goid 48302] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with interleukin-27 to initiate a change in cell activity [goid 45509] [evidence IDA]	Tccr; WSX-1; IL-27R; zcytor1; Wsx1; CRL1	Tccr; WSX-1; IL-27R; zcytor1; Wsx1; CRL1
Mus musculus	MEEBO	ILMN_219649	ILMN_219649	LOC384413	IGKV12-46_AJ235956_Ig_kappa_variable_12-46_18	XM_357631.1			38084355	XM_357631.1	LOC384413		ILMN_1258548	001050731	S	37	TGTGGCTTACAGATGCCAGATGTGACATCCAGATGACTCAGTCTCCAGCC										
Mus musculus	RefSeq	ILMN_218471	ILMN_218471	ARIH2	NM_011790.4	NM_011790.4		23807	150456455	NM_011790.4	Arih2	NP_035920.1	ILMN_2696247	006580349	S	3681	GTGGCGTCTCATCTGTGGAAACCTTTGTTTTTGCACCCTCAGTGGTTGTC				9qF2	Mus musculus ariadne homolog 2 (Drosophila) (Arih2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	UIP48; TRIAD1; AI843547; ARI2	UIP48; TRIAD1; AI843547; ARI2
Mus musculus	RefSeq	ILMN_212341	ILMN_212341	FGFR4	NM_008011.2	NM_008011.2		14186	112293259	NM_008011.2	Fgfr4	NP_032037.2	ILMN_2625318	002480546	S	334	GAGCGTGGTCGTCACTGGTACAAAGAGGGCAGCCGCCTAGCATCTGCTGG	13	+	55257681-55257730	13qB1	Mus musculus fibroblast growth factor receptor 4 (Fgfr4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Fgfr-4	Fgfr-4
Mus musculus	RefSeq	ILMN_185520	ILMN_257666	AK7	XM_994344.1	XM_994344.1		78801	94393130	XM_994344.1	Ak7	XP_999438.1	ILMN_2427705	000770735	S	2099	AACTCGAACACAAGGAGGCCATGGAGATGGCGGAGAAGATAGCCCGCTGG	12	+	107006902-107006951	12qE	PREDICTED: Mus musculus adenylate kinase 7 (Ak7), mRNA.		The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219055	ILMN_219055	DLD	NM_007861.3	NM_007861.3		13382	141801890	NM_007861.3	Dld	NP_031887.2	ILMN_2703657	002230408	S	1803	TCCTGGAAAGTTTTGACCTGTTTTCATACTGTCTACGAGATTCAACTTCA	12	-	32016778-32016827	12qA3	Mus musculus dihydrolipoamide dehydrogenase (Dld), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction [goid 43159] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IDA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+ [goid 4148] [evidence IMP]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AI746344; AI315664	AI746344; AI315664
Mus musculus	RefSeq	ILMN_219786	ILMN_310051	LOC100046567	XM_001476475.1	XM_001476475.1		100046567	149254317	XM_001476475.1	LOC100046567	XP_001476525.1	ILMN_2713557	004260551	S	3435	GACTAAGTAAGTGTAAGAAGACATTGTTGAAACATAAATCAAAATATACT					PREDICTED: Mus musculus similar to Transmembrane emp24 protein transport domain containing 5, transcript variant 1 (LOC100046567), mRNA.					
Mus musculus	RefSeq	ILMN_217906	ILMN_326776	A530095I07RIK	XR_035386.1	XR_035386.1		210373	149264364	XR_035386.1	A530095I07Rik		ILMN_1255121	007320044	S	466	GGCCGCCATCAGTTCAATGACTCAAGTTTAAAAAGAAGGTGAAATTCAGA	13	-	69682255-69682304	13qC1	PREDICTED: Mus musculus RIKEN cDNA A530095I07 gene (A530095I07Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_222620	ILMN_222620	OLFR1143	NM_146293.2	NM_146293.2		258290	112983469	NM_146293.2	Olfr1143	NP_666405.1	ILMN_2752398	003450022	S	556	CCTCCCATCTTACTACTGTCCTGCTCAGATACACAGGTCAATGAGTTAGC	2	+	87643103-87643152	2qD	Mus musculus olfactory receptor 1143 (Olfr1143), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR177-14	MOR177-14
Mus musculus	RefSeq	ILMN_224681	ILMN_224681	AGAP1	NM_001037136.1	NM_001037136.1		347722	80978936	NM_001037136.1	Agap1	NP_001032213.1	ILMN_3086136	002060193	A	9214	CCACCCACAGACATTTCGCTTTGCTTGTTCGTTCATACGACCTTGTTCGG	1	+	91791649-91791698	1qD	Mus musculus ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 (Agap1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	Ggap1; R75364; mKIAA1099	Ggap1; R75364; mKIAA1099
Mus musculus	RefSeq	ILMN_222486	ILMN_222486	BC066135	NM_173031.3	NM_173031.3		271887	154091039	NM_173031.3	BC066135	NP_766619.2	ILMN_2750219	000840682	S	2005	GCGGGGCCTGGAATGTGATGGGTGTGTCTCTAGACACCTGGAGAATAGCA				2qH4	Mus musculus cDNA sequence BC066135 (BC066135), mRNA.				RP23-16P3.6; 4732416F18	RP23-16P3.6; 4732416F18
Mus musculus	RefSeq	ILMN_200225	ILMN_200225	LOC385991	XM_359027.1	XM_359027.1			38080999	XM_359027.1	LOC385991		ILMN_1228756	000020240	S	646	CCGGAGGATTCAGCTCCAAACTTTGTCTCTGGTAAGAAGGACACATGCTC										
Mus musculus	RefSeq	ILMN_222108	ILMN_222108	UFC1	NM_025388.2	NM_025388.2		66155	142379212	NM_025388.2	Ufc1	NP_079664.1	ILMN_2744693	002350523	S	562	TCCTTGGCTGGCAGTGGAAGTCCCCGATCTGATCCAGAAGGGTGTGATCC	1	-	173219047-173219096	1qH3	Mus musculus ubiquitin-fold modifier conjugating enzyme 1 (Ufc1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA062310; 1110021H02Rik; ESTM29	AA062310; 1110021H02Rik; ESTM29
Mus musculus	Riken	ILMN_202696	ILMN_202696	4930572F24RIK	ri|4930572F24|PX00036H14|AK019808|422					AK019808	4930572F24Rik		ILMN_1247212	001500240	S	162	GGTTGGAAGCTGTGCCTTTGGGAGTGCAAGGCTTCTCCATGTGGCGGCAC										
Mus musculus	RefSeq	ILMN_213987	ILMN_213987	RAB3IL1	NM_144538.2	NM_144538.2		74760	87239979	NM_144538.2	Rab3il1	NP_653121.1	ILMN_2643016	004230360	S	583	GGTGACAGCCTTGAAGACATTGGTCATCACATCCACACCAGCCTCTCCCA	19	+	10102795-10102844	19qA	Mus musculus RAB3A interacting protein (rabin3)-like 1 (Rab3il1), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rab family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 17112] [evidence ISO]	Rab3ail1; 1200014K04Rik; AI115013; C76746	Rab3ail1; 1200014K04Rik; AI115013; C76746
Mus musculus	RefSeq	ILMN_213987	ILMN_213987	RAB3IL1	NM_144538.2	NM_144538.2		74760	87239979	NM_144538.2	Rab3il1	NP_653121.1	ILMN_1242474	003870538	S	1740	TAGACTGCCCCAGTGGTAGGGCAAATGTCTCCAATCTGAACAAGGTGGAG	19	+	10109496-10109545	19qA	Mus musculus RAB3A interacting protein (rabin3)-like 1 (Rab3il1), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rab family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 17112] [evidence ISO]	Rab3ail1; 1200014K04Rik; AI115013; C76746	Rab3ail1; 1200014K04Rik; AI115013; C76746
Mus musculus	RefSeq	ILMN_220216	ILMN_220216	ECHS1	NM_053119.1	NM_053119.1		93747	29789288	NM_053119.1	Echs1	NP_444349.1	ILMN_2888181	003450162	S	1211	GCTCAAGATGTGAGCTTCAAGAGGGAAGTGGCCCTCTCTGCTGATTCCCA	7	-	139957273-139957322	7qF4	Mus musculus enoyl Coenzyme A hydratase, short chain, 1, mitochondrial (Echs1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O [goid 4300] [evidence IEA]	C80529	C80529
Mus musculus	Riken	ILMN_204688	ILMN_204688	A230091B22RIK	ri|A230091B22|PX00130O03|AK039056|2687					AK039056	A230091B22Rik		ILMN_1238437	002570647	S	2170	CATTCCTTCTGGTCACCCCCTGTAGAGCTGGCTTAGTAGTAGTAAAGTCC										
Mus musculus	Riken	ILMN_204963	ILMN_204963	4930579N16RIK	ri|4930579N16|PX00036O07|AK029817|3035					AK029817	4930579N16Rik		ILMN_1251579	000160131	S	2691	CCTTCGAAAATGTCACCTCATTAAGCACCAGCTGACCCACATTGCTGACC										
Mus musculus	MEEBO	ILMN_218303	ILMN_218303	D730002M21RIK	scl53009.2_40				51771631	XM_488879	D730002M21Rik		ILMN_2694138	006110156	S	1021	TATCCCAAAGGGTCTTGAAGGTGTTCTGAAGGCTAAGCCCCACCTGTCAC										
Mus musculus	MEEBO	ILMN_218479	ILMN_218479	2310010B21RIK	scl44658.7.15_3	NM_027123.2			31541869	NM_027123.2	2310010B21Rik		ILMN_2696360	005560414	S	2153	CAAAGGAAGCTGTTTTCTCAAAGCTCCGCTGTCCACTGGTAATAGAGGAA										
Mus musculus	RefSeq	ILMN_199743	ILMN_199743	LOC386446	XM_359267.1	XM_359267.1			38076755	XM_359267.1	LOC386446		ILMN_1256555	003940528	S	338	CTCAAATCCATCAGCCTTGTCATTTCAGCCTTACAACCAGACGATTCGGG										
Mus musculus	RefSeq	ILMN_235295	ILMN_235295	THTPA	NM_153083.2	NM_153083.2		105663	26449158	NM_153083.2	Thtpa	NP_694723.1	ILMN_2794825	002100524	S	2495	GGGTGACCTTTTGAGGAGAACTCCCTATGGACCGTCCTATGCCTGTGCAG	14	+	54052773-54052822	14qC3	Mus musculus thiamine triphosphatase (Thtpa), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving thiamin (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 6772] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: thiamin triphosphate + H2O = thiamin diphosphate + phosphate [goid 50333] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence IEA]	MGC38198; AW122966	MGC38198; AW122966
Mus musculus	RefSeq	ILMN_201843	ILMN_247250	SCO1	NM_001040026.1	NM_001040026.1		52892	90991709	NM_001040026.1	Sco1	NP_001035115.1	ILMN_1218036	004060014	S	1323	CAGGTCTGCATCTCTGTCACACAGTAGGTGCTGCTTTGGGCTGGAGGAGA	11	+	66877985-66878034	11qB3	Mus musculus SCO cytochrome oxidase deficient homolog 1 (yeast) (Sco1), nuclear gene encoding mitochondrial protein, mRNA.				D11Bwg1310e; 2610001C07Rik	D11Bwg1310e; 2610001C07Rik
Mus musculus	RefSeq	ILMN_194879	ILMN_247250	SCO1	NM_001040026.1	NM_001040026.1		52892	90991709	NM_001040026.1	Sco1	NP_001035115.1	ILMN_2510467	007400095	S	2209	GCCTGCTGAGTAATGAATCTTGGCTTTGTTTCTGAATTAAACTTCCCTGA	11	+	66878871-66878920	11qB3	Mus musculus SCO cytochrome oxidase deficient homolog 1 (yeast) (Sco1), nuclear gene encoding mitochondrial protein, mRNA.				D11Bwg1310e; 2610001C07Rik	D11Bwg1310e; 2610001C07Rik
Mus musculus	RefSeq	ILMN_216247	ILMN_216247	TAS2R105	NM_020501.1	NM_020501.1		57252	10048425	NM_020501.1	Tas2r105	NP_065247.1	ILMN_2898982	005340672	S	459	GGACGGTAAAGTGAATCATAGAAACAGGACCTCGGAGATGTACTGGGAGA	6	-	131636973-131637022	6qF3	Mus musculus taste receptor, type 2, member 105 (Tas2r105), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required to receive a bitter taste stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50913] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence TAS]	mGR05; T2r5; Tas2r5; T2R05; mt2r5; T2R9	mGR05; T2r5; Tas2r5; T2R05; mt2r5; T2R9
Mus musculus	RefSeq	ILMN_190076	ILMN_236391	LOC432709	XM_484191.3	XM_484191.3		432709	94393316	XM_484191.3	LOC432709	XP_484191.3	ILMN_2466965	002570743	S	189	GAAGGGTCTGGAGTGGCTGGCACACATTTATTGGGATGAGGACAAGCACT	12	-	115916259-115916308	12qF2	PREDICTED: Mus musculus similar to Ig heavy chain V-II region SESS precursor (LOC432709), mRNA.					
Mus musculus	RefSeq	ILMN_191085	ILMN_236391	LOC432709	XM_484191.3	XM_484191.3		432709	94393316	XM_484191.3	LOC432709	XP_484191.3	ILMN_2475959	000620719	S	86	GTATATTGCAGCCCTCCCAGACCCTCAGTCTGACCTGTTCTTTCTCTGTG	12	-	115916362-115916411	12qF2	PREDICTED: Mus musculus similar to Ig heavy chain V-II region SESS precursor (LOC432709), mRNA.					
Mus musculus	RefSeq	ILMN_191087	ILMN_260694	SLCO3A1	NM_023908.2	NM_023908.2		108116	84579879	NM_023908.2	Slco3a1	NP_076397.2	ILMN_1235635	002370136	S	2323	GTGACTACAGGAGGGCTGAACTCTGTATTTGTGAACAAAGAGTCATTTTC	7	-	81429126-81429175	7qD2	Mus musculus solute carrier organic anion transporter family, member 3a1 (Slco3a1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence ISO]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence ISO]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISO]	Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence ISO]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISO]	Anr1; MJAM; Slc21a11; R75096; 5830414C08Rik; OATP-D	Anr1; MJAM; Slc21a11; R75096; 5830414C08Rik; OATP-D
Mus musculus	RefSeq	ILMN_191087	ILMN_260694	SLCO3A1	NM_023908.2	NM_023908.2		108116	84579879	NM_023908.2	Slco3a1	NP_076397.2	ILMN_2663230	000070037	S	2224	GGGGAGGGACCCTGTGCCCGCACACCAGACACATAGGACAAAATTTATCT	7	-	81429225-81429274	7qD2	Mus musculus solute carrier organic anion transporter family, member 3a1 (Slco3a1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence ISO]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence ISO]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISO]	Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence ISO]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISO]	Anr1; MJAM; Slc21a11; R75096; 5830414C08Rik; OATP-D	Anr1; MJAM; Slc21a11; R75096; 5830414C08Rik; OATP-D
Mus musculus	RefSeq	ILMN_191087	ILMN_260694	SLCO3A1	NM_023908.2	NM_023908.2		108116	84579879	NM_023908.2	Slco3a1	NP_076397.2	ILMN_1235735	006060356	S	1604	AACAACAACTGTGAATGCCAGACGGACTCCTTCACGCCAGTGTGCGGGGC	7	-	81463393-81463442	7qD2	Mus musculus solute carrier organic anion transporter family, member 3a1 (Slco3a1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence ISO]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence ISO]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISO]	Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence ISO]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISO]	Anr1; MJAM; Slc21a11; R75096; 5830414C08Rik; OATP-D	Anr1; MJAM; Slc21a11; R75096; 5830414C08Rik; OATP-D
Mus musculus	RefSeq	ILMN_195450	ILMN_230944	MYO3A	NM_148413.2	NM_148413.2		667663	145279210	NM_148413.2	Myo3a	NP_680779.2	ILMN_2694204	004730521	S	4613	ATAAGGAATTTTTGCCTACTCATTACGGACCCAAGGCACATAGCTCTAAT				2qA3	Mus musculus myosin IIIA (Myo3a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	9030416P08Rik	9030416P08Rik
Mus musculus	RefSeq	ILMN_199878	ILMN_316378	LOC381535	NM_001085519.1	NM_001085519.1		381535	148227897	NM_001085519.1	LOC381535	NP_001078988.1	ILMN_1240901	000070241	S	851	GGGACCACATGAAACACTTGTTCAGATGCCTGAAGAGCCCCTTGGAGTCC				4qC6	Mus musculus novel protein similar to Prame proteins (LOC381535), mRNA.					
Mus musculus	RefSeq	ILMN_215861	ILMN_215861	HTR7	NM_008315.2	NM_008315.2		15566	113865997	NM_008315.2	Htr7	NP_032341.2	ILMN_2664542	006520661	S	1467	CCCTGGAGAAGAAGTAATGCAGAACAGGGGGAAACAACGAAACCATTGGC	19	-	36034784-36034833	19qC2	Mus musculus 5-hydroxytryptamine (serotonin) receptor 7 (Htr7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with melanocortin to initiate a change in cell activity [goid 4977] [evidence IEA]	5-HT7; MGC151363	5-HT7; MGC151363
Mus musculus	RefSeq	ILMN_235172	ILMN_235172	FCGR2B	NM_001077189.1	NM_001077189.1		14130	116063578	NM_001077189.1	Fcgr2b	NP_001070657.1	ILMN_3029178	001780500	I	859	GAGAAACCCTTCCAGAGGAAGTAGGTGAGTACAGACAGCCCTCTGGGGGC	1	-	172893513-172893562	1qH3	Mus musculus Fc receptor, IgG, low affinity IIb (Fcgr2b), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IDA]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50777] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]; Any process that stops, prevents, or reduces the rate of type I hypersensitivity, a type of inflammatory response [goid 1811] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus [goid 2862] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5057] [evidence TAS]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IDA]	Fc[g]RII; Fcgr2; Ly-17; LyM-1; Fcr-2; F630109E10Rik; AI528646; Fcr-3; Fcgr2a; FcgRII; CD32; Ly-m20	Fc[g]RII; Fcgr2; Ly-17; LyM-1; Fcr-2; F630109E10Rik; AI528646; Fcr-3; Fcgr2a; FcgRII; CD32; Ly-m20
Mus musculus	RefSeq	ILMN_187887	ILMN_235172	FCGR2B	NM_001077189.1	NM_001077189.1		14130	116063578	NM_001077189.1	Fcgr2b	NP_001070657.1	ILMN_2447970	007210142	S	830	CCCAGGAAACCCTGATCACAGGGAAATGGGAGAAACCCTTCCAGAGGAAG	1	-	172893542-172893591	1qH3	Mus musculus Fc receptor, IgG, low affinity IIb (Fcgr2b), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IDA]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50777] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]; Any process that stops, prevents, or reduces the rate of type I hypersensitivity, a type of inflammatory response [goid 1811] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus [goid 2862] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5057] [evidence TAS]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IDA]	Fc[g]RII; Fcgr2; Ly-17; LyM-1; Fcr-2; F630109E10Rik; AI528646; Fcr-3; Fcgr2a; FcgRII; CD32; Ly-m20	Fc[g]RII; Fcgr2; Ly-17; LyM-1; Fcr-2; F630109E10Rik; AI528646; Fcr-3; Fcgr2a; FcgRII; CD32; Ly-m20
Mus musculus	RefSeq	ILMN_235172	ILMN_235172	FCGR2B	NM_001077189.1	NM_001077189.1		14130	116063578	NM_001077189.1	Fcgr2b	NP_001070657.1	ILMN_3102376	005700220	A	1095	CCCTTGGCATTGGGAAAAGCAAGCCAGAAAGGCCAGGATCTAGTGTCTCC	1	-	172891091-172891140	1qH3	Mus musculus Fc receptor, IgG, low affinity IIb (Fcgr2b), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IDA]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50777] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]; Any process that stops, prevents, or reduces the rate of type I hypersensitivity, a type of inflammatory response [goid 1811] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus [goid 2862] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5057] [evidence TAS]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IDA]	Fc[g]RII; Fcgr2; Ly-17; LyM-1; Fcr-2; F630109E10Rik; AI528646; Fcr-3; Fcgr2a; FcgRII; CD32; Ly-m20	Fc[g]RII; Fcgr2; Ly-17; LyM-1; Fcr-2; F630109E10Rik; AI528646; Fcr-3; Fcgr2a; FcgRII; CD32; Ly-m20
Mus musculus	RefSeq	ILMN_242708	ILMN_242708	MUSK	NM_001037129.1	NM_001037129.1		18198	82533044	NM_001037129.1	Musk	NP_001032206.1	ILMN_3102277	000770661	A	3039	CCCGGTTACGTTCCTACATAATCTCTCAGAGCGAGACTGCAGTGCTTAGG	4	+	58386861-58386910	4qB3	Mus musculus muscle, skeletal, receptor tyrosine kinase (Musk), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptic growth at neuromuscular junctions [goid 8582] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IGI]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IGI]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IGI]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IMP]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mdk4; Mlk; Nsk2; MGC117677; Nsk1; Nsk3	Mdk4; Mlk; Nsk2; MGC117677; Nsk1; Nsk3
Mus musculus	MEEBO	ILMN_192318	ILMN_192318	2900019M05RIK	scl067257.1_121						2900019M05Rik		ILMN_2487003	000430309	S	8	TCCACAAGCACCCTCGCCTGCGGTGGGACCCGCAATGCCACAGATCACAG										
Mus musculus	RefSeq	ILMN_223526	ILMN_223526	CAMK2G	NM_178597.4	NM_178597.4		12325	85362743	NM_178597.4	Camk2g	NP_848712.2	ILMN_2765196	005260520	S	3358	CAGCCAACAGATACCTTCATCACAGGGTTTGGTTTTGCTGGCTTGAAGAC	14	-	21554392-21554441	14qA3	Mus musculus calcium/calmodulin-dependent protein kinase II gamma (Camk2g), transcript variant 1, mRNA. XM_896390 XM_896399 XM_896412 XM_896420 XM_896426 XM_896437 XM_896445 XM_896451 XM_896460 XM_896470 XM_896481 XM_896491 XM_896501 XM_896509 XM_896518 XM_896526 XM_896534 XM_896546 XM_907307		Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	5930429P18Rik; Camkg	5930429P18Rik; Camkg
Mus musculus	RefSeq	ILMN_186126	ILMN_186126	WDR8	NM_021499.2	NM_021499.2		59002	70778725	NM_021499.2	Wdr8	NP_067474.2	ILMN_1256186	007320326	S	623	ATCGAGTGGGCCCCGAATGGCTGTGTACTGGCCGCGTGGGACACCTGCTT	4	+	153526480-153526529	4qE2	Mus musculus WD repeat domain 8 (Wdr8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			5330425N03Rik; Dd57; 2610044M17Rik	5330425N03Rik; Dd57; 2610044M17Rik
Mus musculus	RefSeq	ILMN_196789	ILMN_196789	LOC241293	XM_140862.1	XM_140862.1			20824491	XM_140862.1	LOC241293		ILMN_1227331	006660736	S	358	CTACTCCAGATTGACAAAGATGTCAGAGCCACTGAGTACCCCTGCCTGCT										
Mus musculus	MEEBO	ILMN_196165	ILMN_196165	NUP155	scl48106.36_437				31559997	NM_133227	Nup155		ILMN_1242526	006290703	S	1	TTTATGTCTTATTGACTTGTAAATCCTGTTTTATCTAGTTTGTTTTTGTT						Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the nuclear pore complex [goid 17056] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212481	ILMN_212481	AGBL2	NM_178755.2	NM_178755.2		271813	142370920	NM_178755.2	Agbl2	NP_848870.1	ILMN_2626930	004480097	S	3390	CGACCAGCAGCAAGACGACACCTATTCATGTCTGAGGGTTGTTTTTAGGC	2	+	90674206-90674255	2qE1	Mus musculus ATP/GTP binding protein-like 2 (Agbl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	4930524K04; A430081C19Rik	4930524K04; A430081C19Rik
Mus musculus	RefSeq	ILMN_198124	ILMN_238014	DCPP2	NM_001039238.2	NM_001039238.2		630537	117647233	NM_001039238.2	Dcpp2	NP_001034327.2	ILMN_1221839	005860711	S	372	AGCCGCGCCTGCTAATGGTGGGGTATCTCGTGGGTAATTATCAGTACTCT	17	+	24037515-24037564	17qA3.3	Mus musculus demilune cell and parotid protein 2 (Dcpp2), mRNA.				EG630537; MGC70235; SPT-2; Dcpp-2	EG630537; MGC70235; SPT-2; Dcpp-2
Mus musculus	RefSeq	ILMN_238014	ILMN_238014	DCPP2	NM_001039238.2	NM_001039238.2		630537	117647233	NM_001039238.2	Dcpp2	NP_001034327.2	ILMN_2816271	007050196	S	364	AACCACTCAGCCGCGCCTGCTAATGGTGGGGTATCTCGTGGGTAATTATC	17	+	24037507-24037556	17qA3.3	Mus musculus demilune cell and parotid protein 2 (Dcpp2), mRNA.				EG630537; MGC70235; SPT-2; Dcpp-2	EG630537; MGC70235; SPT-2; Dcpp-2
Mus musculus	RefSeq	ILMN_240727	ILMN_240727	RAD23B	NM_009011.2	NM_009011.2		19359	31543572	NM_009011.2	Rad23b	NP_033037.1	ILMN_2796353	005290672	S	2444	CCCTCCGTAGAGATGTGTTTGATCAGCAAGTCAGGAGTCAAACTGCTGCC	4	+	55411985-55412034	4qB3	Mus musculus RAD23b homolog (S. cerevisiae) (Rad23b), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]	0610007D13Rik; p58; AV001138; mHR23B	0610007D13Rik; p58; AV001138; mHR23B
Mus musculus	RefSeq	ILMN_198006	ILMN_198006	LOC331510	XM_204448.3	XM_204448.3			38080222	XM_204448.3	LOC331510		ILMN_1236669	000990709	S	1140	AAATAAAGATAGAATATTAAAAGCAGTCAAATCTAAGTGGATCAAGGAAC										
Mus musculus	RefSeq	ILMN_189440	ILMN_255166	EXOC7	NM_016857.1	NM_016857.1		53413	8393336	NM_016857.1	Exoc7	NP_058553.1	ILMN_1252619	000290167	S	1857	GGGGTTCAATGATGGACTCGAAGAGCTGTGCAAGATTCAGAAGGTCTGGG	11	-	116150923-116150972	11qE2	Mus musculus exocyst complex component 7 (Exoc7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals [goid 145] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		mKIAA1067; sec70; Exo70; 70kDa	mKIAA1067; sec70; Exo70; 70kDa
Mus musculus	RefSeq	ILMN_207489	ILMN_207489	RAD51L1	XM_147664.1	XM_147664.1			20857307	XM_147664.1	Rad51l1		ILMN_1260533	001740528	I	1550	GAACTGTGGTTCCTAACGTGTGATCTTGGGTCCCTGGAGGCCACTGAGAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213457	ILMN_213457	MRPS22	scl35468.7.1_95				13384903	NM_025485	Mrps22		ILMN_2771594	007040470	S	1099	ACAGTTAAAAACACATTTCATAGTAATGCCCTTCCATTTTGGTAATACTA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISO]		The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISO]		
Mus musculus	RefSeq	ILMN_198071	ILMN_198071	LOC330240	XM_285905.2	XM_285905.2			38081624	XM_285905.2	LOC330240		ILMN_1216554	001050735	S	253	GAATGTGTGTTGACAGCCGTGTTGACTGGCAGCGTGGGGCTTTCCAGTAC										
Mus musculus	RefSeq	ILMN_188005	ILMN_238045	ZC3H7B	NM_001081016.1	NM_001081016.1		20286	124486615	NM_001081016.1	Zc3h7b	NP_001074485.1	ILMN_1259945	000650152	S	4689	ACCCCCACAGGTAGACACAGCCTCCCCTGGCTACCCAAGACATTCCAGAA	15	+	81625430-81625479	15qE1	Mus musculus zinc finger CCCH type containing 7B (Zc3h7b), mRNA. XM_901542 XM_901543 XM_901547 XM_907777 XM_920542 XM_920548 XM_920563 XM_920570				Gm627; Zc2h7b; mKIAA1031; Scrg3	Gm627; Zc2h7b; mKIAA1031; Scrg3
Mus musculus	RefSeq	ILMN_188005	ILMN_238045	ZC3H7B	NM_001081016.1	NM_001081016.1		20286	124486615	NM_001081016.1	Zc3h7b	NP_001074485.1	ILMN_2449032	000380095	S	5874	GTCTAGTATCTTGATAATAATGTAGATGTTTTAATAACAATTTTTGTCCT	15	+	81626615-81626664	15qE1	Mus musculus zinc finger CCCH type containing 7B (Zc3h7b), mRNA. XM_901542 XM_901543 XM_901547 XM_907777 XM_920542 XM_920548 XM_920563 XM_920570				Gm627; Zc2h7b; mKIAA1031; Scrg3	Gm627; Zc2h7b; mKIAA1031; Scrg3
Mus musculus	RefSeq	ILMN_196534	ILMN_196534	2900041A11RIK	XM_135241.5	XM_135241.5			38090163	XM_135241.5	2900041A11Rik		ILMN_1256879	000620397	S	1174	TCCAGCGAGGTGAAGACCCTCAGGAGCCAGATGACAACCCTGGTGGAGAA										
Mus musculus	Riken	ILMN_204114	ILMN_204114	B130047O12RIK	ri|B130047O12|PX00158A24|AK045212|1739					AK045212	B130047O12Rik		ILMN_1232714	004210112	S	1321	CACCCACACACTCACAGTGGAGGGAGGCAGGAACAAAAGCTGGGAAGTAC										
Mus musculus	RefSeq	ILMN_218417	ILMN_218417	MRGPRB4	NM_205795.1	NM_205795.1		233230	45429987	NM_205795.1	Mrgprb4	NP_991364.1	ILMN_2695581	000020554	S	710	GCTGGTTCCTCTTATCAAGGATTATGGAGTTTGATAGCATTTTCTTTAAC	7	-	55453789-55453838	7qB4	Mus musculus MAS-related GPR, member B4 (Mrgprb4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MrgB4	MrgB4
Mus musculus	RefSeq	ILMN_215211	ILMN_260439	FANCE	XM_986338.2	XM_986338.2		72775	149268640	XM_986338.2	Fance	XP_991432.1	ILMN_2656810	004920142	S	1685	GACCATACACAAGGACACACCGCCCTGACTGCTTGTCTCAGAACACACAG	17	+	28463197-28463198:28463199-28463246	17qA3.3	PREDICTED: Mus musculus Fanconi anemia, complementation group E (Fance), mRNA.					
Mus musculus	Riken	ILMN_202149	ILMN_202149	2900093E15RIK	ri|2900093E15|ZX00070A02|AK013846|1004					AK013846	2900093E15Rik		ILMN_2547377	000130253	S	486	ACGCGCACCTGTAGAGACTGCGCCGTCCACCCTCTCGCGCCATCTAAGAT										
Mus musculus	RefSeq	ILMN_198972	ILMN_198972	LOC330891	XM_286141.1	XM_286141.1			28490210	XM_286141.1	LOC330891		ILMN_2533588	007650427	S	283	TTGAAGAGACTGCCATCTGCCTTCTTTATGTTTTGCTCTGAACATTGCCC										
Mus musculus	RefSeq	ILMN_200688	ILMN_239613	LOC545291	NM_001081257.1	NM_001081257.1		545291	124486930	NM_001081257.1	LOC545291	NP_001074726.1	ILMN_1259508	000270360	S	477	CAAGCAGAAAGGCTGTAAGATTGCCCAGCACCCTGATGTCATGCTGGAGC	19	-	43368776-43368825	19qC3	Mus musculus similar to Heparanase-2 (Hpa2) (LOC545291), mRNA.					
Mus musculus	RefSeq	ILMN_239613	ILMN_239613	LOC545291	NM_001081257.1	NM_001081257.1		545291	124486930	NM_001081257.1	LOC545291	NP_001074726.1	ILMN_3068112	001230735	I	701	ACTCCTGGAACAGTTCTAGTGCCCTGAGCCTGTTGAAGTACAGTGCCAGC	19	-	43087568-43087617	19qC3	Mus musculus similar to Heparanase-2 (Hpa2) (LOC545291), mRNA.					
Mus musculus	RefSeq	ILMN_219023	ILMN_236702	OLFR641	NM_147072.1	NM_147072.1		259075	22128814	NM_147072.1	Olfr641	NP_667283.1	ILMN_2703233	006840474	S	739	GCTGTGCTTGCATTTTATGTGCCAATGATAGGGGTCTCTACAGTTCACCG	7	+	111189050-111189099	7qE3	Mus musculus olfactory receptor 641 (Olfr641), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR13-3	MOR13-3
Mus musculus	RefSeq	ILMN_219603	ILMN_238628	1110034B05RIK	NM_001037742.1	NM_001037742.1		68736	83627690	NM_001037742.1	1110034B05Rik	NP_001032831.1	ILMN_1250467	000150382	S	858	GGTCTTACGTATTCAAGACAAAGCCTACAGCAAGAACTTTGAGTAAAAAA	1	-	57445335-57445339:57445340-57445384	1qC1.3	Mus musculus RIKEN cDNA 1110034B05 gene (1110034B05Rik), mRNA. XM_900579 XM_907447 XM_920365 XM_920379 XM_920383 XM_920391 XM_920399				MGC117744; FLJ37953	MGC117744; FLJ37953
Mus musculus	RefSeq	ILMN_219895	ILMN_219895	MEF2D	NM_133665.3	NM_133665.3		17261	145301627	NM_133665.3	Mef2d	NP_598426.1	ILMN_2714918	004610048	S	1791	TGGAGGATCCTATGAGACCGGGGACCGGGATGATGGACGGGGGGACTTTG				3qF1	Mus musculus myocyte enhancer factor 2D (Mef2d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	MGC31718; C80750	MGC31718; C80750
Mus musculus	RefSeq	ILMN_190858	ILMN_190858	TTC19	NM_028360.2	NM_028360.2		72795	110347536	NM_028360.2	Ttc19	NP_082636.3	ILMN_2473858	001070300	S	2164	CGGTGTGAGTACGATTGCCAGTGGACTTTGGTTCATGTGTTTGTTCTGGG	11	+	62128671-62128720	11qB2	Mus musculus tetratricopeptide repeat domain 19 (Ttc19), transcript variant 1, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2810460C24Rik; 2010204O13Rik; AI505442; RP23-330N10.4	2810460C24Rik; 2010204O13Rik; AI505442; RP23-330N10.4
Mus musculus	RefSeq	ILMN_199758	ILMN_199758	LOC382965	XM_356778.1	XM_356778.1			38076891	XM_356778.1	LOC382965		ILMN_2536378	006370075	S	676	TCAAGCTTCAGAGACACTGGAGGGGCAGCCTTGGTCTTCAAGCGCCAGAC										
Mus musculus	RefSeq	ILMN_198602	ILMN_312976	LOC434788	XR_031704.1	XR_031704.1		434788	149271668	XR_031704.1	LOC434788		ILMN_2532269	002230576	S	697	TGGGGGCCCAAGTCATCATCACCACGATCGACCCCATCACTGCACTACAA	X	+	65883299-65883348	XqA7.1	PREDICTED: Mus musculus similar to S-adenosylhomocysteine hydrolase (LOC434788), misc RNA.					
Mus musculus	MEEBO	ILMN_188646	ILMN_188646	TRIM6	scl094088.6_27	XM_133616.2			28480483	XM_133616.2	Trim6		ILMN_2454466	004920348	S	6	AAATCTTTGGATGGTTTCAAGAAGAGATTGTAGCTTTGGTTTTAACAATA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_214183	ILMN_214183	STX7	NM_016797.4	NM_016797.4		53331	142365428	NM_016797.4	Stx7	NP_058077.2	ILMN_2645255	002750367	S	2059	GTCTGGCTTTGTGGCCATTATACCTTCCCTCGTGCGCCATGGAACACTTC	10|NT_114865.1	+	31628-31677	10qA4	Mus musculus syntaxin 7 (Stx7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW107239; AI317144; AI315064; Syn7	AW107239; AI317144; AI315064; Syn7
Mus musculus	Riken	ILMN_206629	ILMN_206629	7530401O03RIK	ri|7530401O03|PX00312K15|AK078674|2389					AK078674	7530401O03Rik		ILMN_2581506	000580373	S	2277	GTGAAGAAGAGGTGGTGACGGAGGCTTGGGGATTGGTGGGATGTGGGCTT										
Mus musculus	MEEBO	ILMN_223810	ILMN_223810	OLFR99	scl49931.1.1_57				33239261	NM_146515	Olfr99		ILMN_1230728	001410398	S	581	TCCTGGTGATAATTTTGGTTGGAATTTTAGGAATCAGTGCGGTTCTCTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_204531	ILMN_228119	4933432B09RIK	XM_901172.2	XM_901172.2		75729	94398761	XM_901172.2	4933432B09Rik	XP_906265.2	ILMN_1244875	003460608	S	1211	GCTGGCCCCAGTCTTGTGGAGTTCAGCTTCTTTTGCATCCCAAGTGCTGG	15	-	79456035-79456084	15qE1	PREDICTED: Mus musculus RIKEN cDNA 4933432B09 gene, transcript variant 3 (4933432B09Rik), mRNA.					
Mus musculus	MEEBO	ILMN_194340	ILMN_194340	B230217C12RIK	scl40952.3_414				51766405	XM_484073	B230217C12Rik		ILMN_2505553	005870187	S	19	GCTACAGCTCTAGTTTATTCCCAGACTGGAAAAGATTTCCTATCTCTTCC										
Mus musculus	RefSeq	ILMN_212388	ILMN_212388	GPX8	NM_027127.2	NM_027127.2		69590	142368412	NM_027127.2	Gpx8	NP_081403.1	ILMN_2653166	007050328	S	496	GCCAAGGTGGAATTTTTGGAAGTATCTGGTCAACCCTGAGGGACAAGTCG	13	-	113833441-113833490	13qD2.2	Mus musculus glutathione peroxidase 8 (putative) (Gpx8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AU017063	AU017063
Mus musculus	RefSeq	ILMN_212388	ILMN_212388	GPX8	NM_027127.2	NM_027127.2		69590	142368412	NM_027127.2	Gpx8	NP_081403.1	ILMN_2625855	003870328	S	290	CACAAGGAGTTCGGGCCCTATCACTTCAACGTCCTGGCTTTTCCGTGCAA	13	-	113835779-113835828	13qD2.2	Mus musculus glutathione peroxidase 8 (putative) (Gpx8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AU017063	AU017063
Mus musculus	Riken	ILMN_206766	ILMN_206766	E030001K11RIK	ri|E030001K11|PX00203H20|AK086795|3371					AK086795	E030001K11Rik		ILMN_2582551	006060187	S	3100	GCTGGTGGGGACAGGCTTCACACAGCAGACTGAGGAGCAATACTTCCAGT										
Mus musculus	RefSeq	ILMN_222417	ILMN_222417	DDX20	NM_017397.2	NM_017397.2		53975	31980856	NM_017397.2	Ddx20	NP_059093.2	ILMN_2749303	006330615	S	2696	GGGGTTTGGTGGCATTTTGGAGGAACTTGAGAGGACTTGAGGCTTTCTAC	3	-	105481347-105481396	3qF2.2	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 (Ddx20), mRNA.	A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IPI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC159174; GEMIN3; dp103	MGC159174; GEMIN3; dp103
Mus musculus	RefSeq	ILMN_208746	ILMN_208746	SRA1	NM_025291.2	NM_025291.2		24068	141801852	NM_025291.2	Sra1	NP_079567.1	ILMN_2659132	002060072	S	198	CCAGTGGATCATCCACCTCCTTCAAGTAAGGCTTCCAGGCCTCCGCCCAT	18	-	36828429-36828478	18qB2	Mus musculus steroid receptor RNA activator 1 (Sra1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A protein complex consisting of a steroid receptor associated with nonreceptor proteins, minimally a dimer of Hsp90 and a monomer of hsp56/FKBP59; forms in the absence of bound ligand [goid 5831] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; The area of a motile cell closest to the direction of movement [goid 31252] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA];  [goid 30374] [evidence IDA]	SRA; STRAA1; AA959952; Strra1	SRA; STRAA1; AA959952; Strra1
Mus musculus	RefSeq	ILMN_208746	ILMN_208746	SRA1	NM_025291.2	NM_025291.2		24068	141801852	NM_025291.2	Sra1	NP_079567.1	ILMN_1235049	007040152	S	607	CTTCAGAGGAGACCAAAGAAGAGAAATTTACAGTGGAACCTGAGAACCAG	18	-	36827137-36827186	18qB2	Mus musculus steroid receptor RNA activator 1 (Sra1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A protein complex consisting of a steroid receptor associated with nonreceptor proteins, minimally a dimer of Hsp90 and a monomer of hsp56/FKBP59; forms in the absence of bound ligand [goid 5831] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; The area of a motile cell closest to the direction of movement [goid 31252] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA];  [goid 30374] [evidence IDA]	SRA; STRAA1; AA959952; Strra1	SRA; STRAA1; AA959952; Strra1
Mus musculus	RefSeq	ILMN_198193	ILMN_329926	LOC668573	XR_035016.1	XR_035016.1		668573	149268880	XR_035016.1	LOC668573		ILMN_1245207	002810600	S	180	TAATGCAAAGGCAGTGAGTGCGCGCGCAGAGGCCATCAAGCCCAAGATGC	17	+	56378511-56378560	17qD	PREDICTED: Mus musculus similar to ribosomal protein (LOC668573), misc RNA.					
Mus musculus	RefSeq	ILMN_214071	ILMN_214071	OLFR1396	NM_146337.1	NM_146337.1		258334	22129627	NM_146337.1	Olfr1396	NP_666449.1	ILMN_1244707	006520605	S	436	GTCCTCATGAATCAGAAGGTCTGTCTGCAGATCATTGGGAGCTCTTGGGC	11	-	48926774-48926823	11qB1.2	Mus musculus olfactory receptor 1396 (Olfr1396), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC123862; MOR276-2	MGC123862; MOR276-2
Mus musculus	RefSeq	ILMN_214071	ILMN_214071	OLFR1396	NM_146337.1	NM_146337.1		258334	22129627	NM_146337.1	Olfr1396	NP_666449.1	ILMN_2965854	007000736	S	918	TCGCGATGTGATAGGAGCACTGCAGAAAGGGCTGGACCGATGCAGGGTTG	11	-	48926292-48926341	11qB1.2	Mus musculus olfactory receptor 1396 (Olfr1396), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC123862; MOR276-2	MGC123862; MOR276-2
Mus musculus	RefSeq	ILMN_200439	ILMN_200439	LOC384290	XM_357546.1	XM_357546.1			38081946	XM_357546.1	LOC384290		ILMN_2538765	001260672	S	11	GGGTGCTCAGTGCCATTGATGGAGAGCAGTTGAGCTGTAGAATTTTCAGG										
Mus musculus	RefSeq	ILMN_212946	ILMN_212946	LCE1C	NM_028622.2	NM_028622.2		73719	142353719	NM_028622.2	Lce1c	NP_082898.1	ILMN_1237529	006420356	S	566	GGAAGACCAGCCCATGTTTTCTGCTCTCCTTTTCTTCGGTCCTTCATGTC	3	+	92484682-92484731	3qF1	Mus musculus late cornified envelope 1C (Lce1c), mRNA.				1110014K05Rik	1110014K05Rik
Mus musculus	RefSeq	ILMN_222655	ILMN_222655	EXOC2	NM_025588.2	NM_025588.2		66482	31543676	NM_025588.2	Exoc2	NP_079864.1	ILMN_2752948	005550608	S	3828	CCTCTGTTGCACTTCACTCTTCAGACTGATCTGTGGATAATGTAGGCTCC	13	-	30906159-30906208	13qA3.2	Mus musculus exocyst complex component 2 (Exoc2), mRNA.	A protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals [goid 145] [evidence TAS]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of exocytosis [goid 45921] [evidence TAS]	Interacting selectively with Ral protein, any member of the Ral subfamily of the Ras superfamily of monomeric GTPases [goid 17160] [evidence IDA]	AI648199; Sec5; 2410030I24Rik; Sec5l1; RP23-213G18.3	AI648199; Sec5; 2410030I24Rik; Sec5l1; RP23-213G18.3
Mus musculus	RefSeq	ILMN_214279	ILMN_214279	D4BWG0951E	NM_026821.4	NM_026821.4		52829	146149309	NM_026821.4	D4Bwg0951e	NP_081097.2	ILMN_2646296	003310025	S	1353	GGGACTGGTGTGCAATTAAACTTGTATGTATCCTTCTTCTCTGCTGCTAT				4qC3	Mus musculus DNA segment, Chr 4, Brigham & Women's Genetics 0951 expressed (D4Bwg0951e), mRNA.				WI-13707; bM350F23.1; RP24-318C20.1; AV175137; AV077978; 1110029A09Rik	WI-13707; bM350F23.1; RP24-318C20.1; AV175137; AV077978; 1110029A09Rik
Mus musculus	MEEBO	ILMN_216006	ILMN_216006	ARRDC3	scl00105171.1_137	NM_178917.2			31342769	NM_178917.2	Arrdc3		ILMN_2666279	001980411	S	3869	TGAGGGCCACAGTCATGCTCTAGTATTCAAGATAGCTTCCTAATTTTTCA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_209337	ILMN_209337	C9	NM_013485.1	NM_013485.1		12279	15375311	NM_013485.1	C9	NP_038513.1	ILMN_2937379	007650368	S	1709	AATATAGCCTTCAGGAAACAAAGCAAACCCTGGTTCACATGGAAGGGGGA	15	+	6447166-6447172:6447173-6447179:6448432-6448467	15qA1	Mus musculus complement component 9 (C9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow [goid 5579] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]			
Mus musculus	RefSeq	ILMN_209337	ILMN_209337	C9	NM_013485.1	NM_013485.1		12279	15375311	NM_013485.1	C9	NP_038513.1	ILMN_2937375	007100075	S	1427	TGATAAGACTGACTTCGCCAACTGGGCCTCGTCCCTGGCAAACGCTCCAG	15	+	6441473-6441522	15qA1	Mus musculus complement component 9 (C9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow [goid 5579] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]			
Mus musculus	RefSeq	ILMN_209337	ILMN_209337	C9	NM_013485.1	NM_013485.1		12279	15375311	NM_013485.1	C9	NP_038513.1	ILMN_2594846	004060220	S	1212	AATATGGATTTACGTATTCCTCTACAAGACGACTTAAAGGATGCATCAGT	15	+	6439866-6439915	15qA1	Mus musculus complement component 9 (C9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow [goid 5579] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]			
Mus musculus	MEEBO	ILMN_185754	ILMN_185754	ZFP294	scl48263.32_138	XM_128374.5			38080023	XM_128374.5	Zfp294		ILMN_2429721	005090725	S	12	TGGGAACGCATTCTGGGAGACTTGTGTGCATAGCTGTCAGTTCACACCGG								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222102	ILMN_222102	EPHA6	NM_007938.2	NM_007938.2		13840	145312273	NM_007938.2	Epha6	NP_031964.2	ILMN_1237726	001170736	S	4006	GTGGCATCTTCAGAGACGTGTGTGGAGTTTGATGATAGATAAGAAGAAAA				16qC1.3	Mus musculus Eph receptor A6 (Epha6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Hek12; Ehk2; m-ehk2	Hek12; Ehk2; m-ehk2
Mus musculus	RefSeq	ILMN_197957	ILMN_222102	EPHA6	NM_007938.2	NM_007938.2		13840	145312273	NM_007938.2	Epha6	NP_031964.2	ILMN_1248242	003360079	S	124	GTGAAGGTGCAGTTCTGGGGACCCAAGTGCTCTCTGCATCCAAGTGGGCA				16qC1.3	Mus musculus Eph receptor A6 (Epha6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Hek12; Ehk2; m-ehk2	Hek12; Ehk2; m-ehk2
Mus musculus	RefSeq	ILMN_213595	ILMN_213595	HMMR	NM_013552.1	NM_013552.1		15366	7305144	NM_013552.1	Hmmr	NP_038580.1	ILMN_1246838	004860458	S	124	CCGGGTGCTTATGATGTTAAAACTTCAGAAGCAACTAAAGGACCAGTGTC	11	-	40542658-40542707	11qA5	Mus musculus hyaluronan mediated motility receptor (RHAMM) (Hmmr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AA386826; Rhamm; CD168	AA386826; Rhamm; CD168
Mus musculus	RefSeq	ILMN_213595	ILMN_213595	HMMR	NM_013552.1	NM_013552.1		15366	7305144	NM_013552.1	Hmmr	NP_038580.1	ILMN_2681054	005910544	S	2560	TTAATTTCTACTGCCTAGTCTTAGGTATATGAAACGGTAATTCAGCATTT	11	-	40516179-40516228	11qA5	Mus musculus hyaluronan mediated motility receptor (RHAMM) (Hmmr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AA386826; Rhamm; CD168	AA386826; Rhamm; CD168
Mus musculus	MEEBO	ILMN_187379	ILMN_187379	1700020O03RIK	scl3445.3.1_52						1700020O03Rik		ILMN_1230160	007330168	S	18	GTGTGGGCTCACTCATACAATGGAGTAAAGCATGCAACTCTGCCTTCACC										
Mus musculus	RefSeq	ILMN_187538	ILMN_261884	MACF1	XM_910859.3	XM_910859.3		11426	149252986	XM_910859.3	Macf1	XP_915952.3	ILMN_1259884	002140575	S	4529	GGAACAGATCTCTGAGCAGTTGCGTGTGCTGAACAAGACTTACCATGACC				4qD2.2	PREDICTED: Mus musculus microtubule-actin crosslinking factor 1, transcript variant 21 (Macf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane [goid 6620] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_187538	ILMN_261884	MACF1	XM_910859.3	XM_910859.3		11426	149252986	XM_910859.3	Macf1	XP_915952.3	ILMN_2620934	006100445	S	18290	CACCCAGGATATTGTTCATGACTTAGAAAGCCCTGGTATTGACCCATCCA				4qD2.2	PREDICTED: Mus musculus microtubule-actin crosslinking factor 1, transcript variant 21 (Macf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane [goid 6620] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_203644	ILMN_203644	CLCN5	ri|9330181N07|PX00106N20|AK034356|4734					AK034356	Clcn5		ILMN_2558874	002900682	S	4279	GATGGTGCCACATACCTGTAATCTCAGGACTTGTGTAGTAGAGACAGGAG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]		
Mus musculus	MEEBO	ILMN_212593	ILMN_212593	2700078E11RIK	scl0078832.1_319	XM_129335.2			28527325	XM_129335.2	2700078E11Rik		ILMN_1233198	002490270	S	3179	TCTTTTTCTCTAAAAGAATTTTGCCTATATAAAAGCATTATATTAAATAA						Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215314	ILMN_215314	FBXW4	NM_013907.2	NM_013907.2		30838	118130948	NM_013907.2	Fbxw4	NP_038935.1	ILMN_1241696	005360246	S	1362	TACAACCTCCACGTCTTAGACTTTCAGAACCCATGACAGAGCAGCCCTGC	19	-	45706356-45706405	19qC3	Mus musculus F-box and WD-40 domain protein 4 (Fbxw4), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IMP]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IGI]		dactylin; Dac; SHFM3; SHSF3; Fbw4	dactylin; Dac; SHFM3; SHSF3; Fbw4
Mus musculus	RefSeq	ILMN_215314	ILMN_215314	FBXW4	NM_013907.2	NM_013907.2		30838	118130948	NM_013907.2	Fbxw4	NP_038935.1	ILMN_2657986	003840333	S	862	GGCAGTGCTTACACACCATCCAGACCGAAGACCGAGTCTGGTCCATTGCT	19	-	45714936-45714985	19qC3	Mus musculus F-box and WD-40 domain protein 4 (Fbxw4), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IMP]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IGI]		dactylin; Dac; SHFM3; SHSF3; Fbw4	dactylin; Dac; SHFM3; SHSF3; Fbw4
Mus musculus	RefSeq	ILMN_196871	ILMN_243383	XKR9	NM_001011873.2	NM_001011873.2		381246	118131129	NM_001011873.2	Xkr9	NP_001011873.1	ILMN_1229264	002650348	S	123	CAGCAGAGGCGAAGATACAGCAAGGCCTTCTTGTACCACTTGATCTGGCG	1	+	13662232-13662281	1qA3	Mus musculus X Kell blood group precursor related family member 9 homolog (Xkr9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			XRG9; Gm1620	XRG9; Gm1620
Mus musculus	RefSeq	ILMN_243383	ILMN_243383	XKR9	NM_001011873.2	NM_001011873.2		381246	118131129	NM_001011873.2	Xkr9	NP_001011873.1	ILMN_3159558	003710735	A	1347	GTGCTAGGCACCCTGGGAATCTTGACTGTATTCTGGATCTACCCTCTTTC	1	+	13691225-13691274	1qA3	Mus musculus X Kell blood group precursor related family member 9 homolog (Xkr9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			XRG9; Gm1620	XRG9; Gm1620
Mus musculus	RefSeq	ILMN_243383	ILMN_243383	XKR9	NM_001011873.2	NM_001011873.2		381246	118131129	NM_001011873.2	Xkr9	NP_001011873.1	ILMN_3080183	006020685	I	1802	ACCACTGAGTTGCACCCCCAGCCATCTCGCTGGTTCCAAAAGTCTTGAGT	1	+	13691680-13691729	1qA3	Mus musculus X Kell blood group precursor related family member 9 homolog (Xkr9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			XRG9; Gm1620	XRG9; Gm1620
Mus musculus	RefSeq	ILMN_184920	ILMN_324430	LOC100046895	XM_001477026.1	XM_001477026.1		100046895	149268446	XM_001477026.1	LOC100046895	XP_001477076.1	ILMN_2422687	007210386	S	1621	GCATCATGCATGAACCTTCGGTCAGGGATGTCGTTGGGGAAGTGACTTCA					PREDICTED: Mus musculus similar to Quaking protein (LOC100046895), mRNA.					
Mus musculus	Riken	ILMN_202770	ILMN_202770	4930523M17RIK	ri|4930523M17|PX00033O16|AK019693|2820					AK019693	4930523M17Rik		ILMN_2552161	000510408	S	2342	GCCCTGTCTTCCCAGGGTTCTAAGCCAGCCATTTGTAACTGAGTCCTGGA										
Mus musculus	RefSeq	ILMN_191238	ILMN_191238	WNT9B	NM_011719.3	NM_011719.3		22412	141801906	NM_011719.3	Wnt9b	NP_035849.2	ILMN_1231288	001070201	S	4018	GAAAATCAGTTCACTGGCAAATGGGACCTGCATCCTGACCTGGCTGCCTG	11	-	103589128-103589177	11qE1	Mus musculus wingless-type MMTV integration site 9B (Wnt9b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	MGC124412; Wnt15; Wnt14b	MGC124412; Wnt15; Wnt14b
Mus musculus	RefSeq	ILMN_219340	ILMN_219340	GCLM	NM_008129.3	NM_008129.3		14630	142373116	NM_008129.3	Gclm	NP_032155.1	ILMN_1256354	006900097	S	1398	CTCTGCAGCAGCGCGCTCACAGGAACCACTGTATTCTAATCATTAAGCTG	3	+	121969494-121969543	3qG1	Mus musculus glutamate-cysteine ligase , modifier subunit (Gclm), mRNA.	An enzyme complex that catalyzes the ligation of glutamate to cysteine, forming glutamylcysteine [goid 17109] [evidence IDA]	The chemical reactions and pathways involving cysteine, 2-amino-3-mercaptopropanoic acid [goid 6534] [evidence IMP]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that modulates the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51900] [evidence IGI]; Any process that activates or increases the activity of glutamate-cysteine ligase, typically by lowering its sensitivity to inhibition by glutathione and by increasing its affinity for glutamate [goid 35229] [evidence IDA]	Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with the catalytic subunit of glutamate-cysteine ligase [goid 35226] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Glclr	Glclr
Mus musculus	RefSeq	ILMN_254281	ILMN_254281	PANX1	NM_019482.2	NM_019482.2		55991	86262133	NM_019482.2	Panx1	NP_062355.2	ILMN_2946088	004150148	S	1939	TAAGAGCACAGAGCCTCAGCCACAGAGGAGCAGCATTCTGGACTGGCAGG	9	-	14810315-14810364	9qA2	Mus musculus pannexin 1 (Panx1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 alpha from a cell or group of cells [goid 50717] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]		AI847747	AI847747
Mus musculus	RefSeq	ILMN_211385	ILMN_211385	CXCL17	NM_153576.2	NM_153576.2		232983	133891726	NM_153576.2	Cxcl17	NP_705804.2	ILMN_1226394	006380441	S	298	CACAGCAGTGCTGGGGCCACCAAGGAAGCAGTGTCCCTGTGATCACGTCA	7	-	26187188-26187237	7qA3	Mus musculus chemokine (C-X-C motif) ligand 17 (Cxcl17), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	VCC-1; Vcc1; MGC37641	VCC-1; Vcc1; MGC37641
Mus musculus	RefSeq	ILMN_201463	ILMN_312111	EG666731	XR_035637.1	XR_035637.1		666731	149275114	XR_035637.1	EG666731		ILMN_1245116	004860059	S	646	GTGTTCTGACTCCCAGGAGCACAGCGGTCACACACACTGTTCCATTGATG				9qE3.1	PREDICTED: Mus musculus predicted gene, EG666731 (EG666731), misc RNA.					
Mus musculus	Riken	ILMN_203885	ILMN_203885	A630063F18RIK	ri|A630063F18|PX00146P05|AK042141|2385					AK042141	A630063F18Rik		ILMN_2560716	004850132	S	1867	GTGTATCTGTGAGGTATATGATGGGGAGTTTGATTGTCATGGAGTTGGAG										
Mus musculus	RefSeq	ILMN_221961	ILMN_221961	OTTMUSG00000011275	NM_206867.1	NM_206867.1		230398	46047410	NM_206867.1	OTTMUSG00000011275	NP_996750.1	ILMN_2742656	006480152	S	184	CCCCAGGAGAAGGTGGATACCCTGAAGATCCAGAAAGAGAAAGCCATCCC	4	-	88322527-88322576	4qC4	Mus musculus predicted gene, OTTMUSG00000011275 (OTTMUSG00000011275), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	BC114392; Ifna6T; Ifnat6	BC114392; Ifna6T; Ifnat6
Mus musculus	MEEBO	ILMN_224056	ILMN_224056	TIGD4	scl0403175.1_274				46402304	NM_207278	Tigd4		ILMN_2773826	002000202	S	3355	CTTATTTTCTATTGTTGATTTGCTCGGCTGTGAGGATTTAGTTGAGCCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221907	ILMN_221907	ASCC3L1	NM_177214.4	NM_177214.4		320632	118130349	NM_177214.4	Ascc3l1	NP_796188.2	ILMN_2741899	005810170	S	6504	CTGAGGCACTGAACCTGAAAACAGGAATGTGGACTAGGTCTGTCAGGCTG	2	+	127065951-127066000	2qF1	Mus musculus activating signal cointegrator 1 complex subunit 3-like 1 (Ascc3l1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	U5-200-KD; A330064G03Rik; KIAA0788; HELIC2; U5-200KD; BC011390	U5-200-KD; A330064G03Rik; KIAA0788; HELIC2; U5-200KD; BC011390
Mus musculus	RefSeq	ILMN_214767	ILMN_214767	2310046O06RIK	NM_175273.2	NM_175273.2		78323	31341494	NM_175273.2	2310046O06Rik	NP_780482.1	ILMN_2651698	001430142	S	2737	CAGTAGTGTCCAGCTAGGAGGGATAGAAATGGGCAGCTGTTAGGGGACAG	9	+	57341055-57341104	9qB	Mus musculus RIKEN cDNA 2310046O06 gene (2310046O06Rik), mRNA.				AI594866	AI594866
Mus musculus	RefSeq	ILMN_219779	ILMN_249974	HIST1H1E	NM_015787.2	NM_015787.2		50709	60097927	NM_015787.2	Hist1h1e	NP_056602.1	ILMN_2713491	003190364	S	702	CCGCAGCCAAGAAAAAGTAAATTTTCTTTGGCCAACTGCTTAGAAGCCCA	13	-	23713676-23713706:23713707-23713725	13qA3.1	Mus musculus histone cluster 1, H1e (Hist1h1e), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another [goid 16584] [evidence IMP]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	H1f4; H1var2; H1-4; H1e; H1s-4	H1f4; H1var2; H1-4; H1e; H1s-4
Mus musculus	MEEBO	ILMN_186875	ILMN_186875	SCL0003052.1_338	scl0003052.1_338	AK087503.1			26104325	AK087503.1	scl0003052.1_338		ILMN_2439251	006180592	S	3	CTCTTTTCACAGAGGACAGAGGGTCCTCATCCCTAACACCTATGTGTCCC										
Mus musculus	MEEBO	ILMN_223840	ILMN_223840	OLFR457	scl0258989.1_267				22128962	NM_146987	Olfr457		ILMN_2770235	006180100	S	818	TGGTTGTGCTATTCTATGCTGTGGTCACTCCCCATGCTGAATCCTCTCAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216387	ILMN_216387	FNTB	NM_145927.2	NM_145927.2		110606	118130233	NM_145927.2	Fntb	NP_666039.1	ILMN_2670517	002690102	S	2484	CTGCCTCTGATTCCCTGTTGCTTTGGTGTACTGGGCTATGTATTACCTCC	12	+	78022323-78022372	12qC3	Mus musculus farnesyltransferase, CAAX box, beta (Fntb), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate [goid 4660] [evidence IEA]; Catalysis of the reaction: trans,trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate [goid 4311] [evidence IMP]	2010013E13Rik; AA409500	2010013E13Rik; AA409500
Mus musculus	RefSeq	ILMN_204447	ILMN_237086	4930563E22RIK	XM_917911.2	XM_917911.2		75304	94390514	XM_917911.2	4930563E22Rik	XP_923004.1	ILMN_1216391	000430554	S	3214	TGTGCTGGGTAATAGTTGTGTCTTGCCTTCAGCTGTGTCAGCCAGGTTAG				11qB4	PREDICTED: Mus musculus RIKEN cDNA 4930563E22 gene, transcript variant 3 (4930563E22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223389	ILMN_223389	CCDC60	NM_177759.3	NM_177759.3		269693	141802445	NM_177759.3	Ccdc60	NP_808427.1	ILMN_2763420	005870072	S	2487	GTGCCATGTGTTTTGCCTGCGTAATGTAATTATTTATATTGGCATATGAC	5	-	116575635-116575684	5qF	Mus musculus coiled-coil domain containing 60 (Ccdc60), mRNA.				C130098D09; AU018954	C130098D09; AU018954
Mus musculus	RefSeq	ILMN_217308	ILMN_217308	GARNL3	NM_178888.4	NM_178888.4		99326	142385742	NM_178888.4	Garnl3	NP_849219.2	ILMN_1235488	004610288	S	3258	GTGCCATCTTTCTCGACCCTGTTTCTTTCCATTCAAGAACCGTCGGTCCC	2	-	32841965-32842014	2qB	Mus musculus GTPase activating RANGAP domain-like 3 (Garnl3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]	AW120551	AW120551
Mus musculus	RefSeq	ILMN_215734	ILMN_215734	OLFR134	NM_146832.1	NM_146832.1		258829	22129198	NM_146832.1	Olfr134	NP_667043.1	ILMN_1213093	005960575	S	872	CTCTGAGAAATAAGGATGTAAAGGGGGCATTAGGTAACCTGTTCAAGAAC	17	+	38312902-38312951	17qB1	Mus musculus olfactory receptor 134 (Olfr134), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-5	MOR256-5
Mus musculus	RefSeq	ILMN_218285	ILMN_218285	OLFR1347	NM_146385.1	NM_146385.1		258383	22129530	NM_146385.1	Olfr1347	NP_666497.1	ILMN_2693946	000060671	S	478	GGCTGGGTGGCCTTGTGGTCTCGGCGATAAAGACAAAATGCATTGCAAGC	7	-	6441056-6441105	7qA1	Mus musculus olfactory receptor 1347 (Olfr1347), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC157588; MOR103-11	MGC157588; MOR103-11
Mus musculus	RefSeq	ILMN_215686	ILMN_218285	OLFR1347	NM_146385.1	NM_146385.1		258383	22129530	NM_146385.1	Olfr1347	NP_666497.1	ILMN_2662427	006250161	S	864	CTACACAGTGGTCACACCTCTCTGCAACCCTATCATCTACTGTCTGAGAA	7	-	6440670-6440719	7qA1	Mus musculus olfactory receptor 1347 (Olfr1347), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC157588; MOR103-11	MGC157588; MOR103-11
Mus musculus	MEEBO	ILMN_223410	ILMN_223410	BC003324	scl26031.4.1_17				13385073	NM_030259	BC003324		ILMN_2763710	001510121	S	900	TCTGGGGACAGACCTGGACAGTCAGTAAGCTTTGGCCAGGCCAAATGAGG										
Mus musculus	RefSeq	ILMN_221739	ILMN_221739	4732496O08RIK	NM_172877.2	NM_172877.2		242736	142375940	NM_172877.2	4732496O08Rik	NP_766465.1	ILMN_1212648	000430368	S	3696	TCTAGCCTCCGGCTGTCCCTTTGAAAACAAAGGTCTCCAGTAGATGTCCC	4	+	143010804-143010853	4qE1	Mus musculus RIKEN cDNA 4732496O08 gene (4732496O08Rik), mRNA.				AU023234	AU023234
Mus musculus	Riken	ILMN_206759	ILMN_206759	BRCA1	ri|D930010H15|PX00200P18|AK086173|1919					AK086173	Brca1		ILMN_1239750	003130132	S	133	TTGGGGCTTCTCCGTCCTCGGCGCTTGGAAGTACGGATCTTTTTTCTCGG						A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence TAS]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching [goid 43009] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence ISO]; The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51298] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IDA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The cell cycle process whereby centrosome duplication and separation takes place. The centrosome cycle can operate with a considerable degree of independence from other processes of the cell cycle [goid 7098] [evidence IGI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; Interacting selectively with damaged DNA [goid 3684] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190082	ILMN_236678	BBX	NM_027444.2	NM_027444.2		70508	141802692	NM_027444.2	Bbx	NP_081720.1	ILMN_2669461	002490091	S	3321	GCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGCG	16	-	50197320-50197369	16qB5	Mus musculus bobby sox homolog (Drosophila) (Bbx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	5730403O13Rik	5730403O13Rik
Mus musculus	Riken	ILMN_207245	ILMN_207245	F830016N17RIK	ri|F830016N17|PL00005B16|AK089767|2968					AK089767	F830016N17Rik		ILMN_1229242	003060689	S	2628	GTAACTGCTCCTAATCCCTCTCAACAGGAACTGCCAGGGGTATGTGCGTG										
Mus musculus	RefSeq	ILMN_216753	ILMN_216753	IL10RB	NM_008349.4	NM_008349.4		16155	153791598	NM_008349.4	Il10rb	NP_032375.2	ILMN_1250260	003800142	S	1504	GGCCACTGAATGTAATTTGAGCCCTTTGTGCTCACTAAAACAAGGATCAC				16qC3.3	Mus musculus interleukin 10 receptor, beta (Il10rb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with interleukin-10 to initiate a change in cell activity [goid 4920] [evidence IMP]	D16H21S58; 6620401D04Rik; IL-10R2; CRF2-4; Il10r2; D21S58h; Crfb4; AI528744	D16H21S58; 6620401D04Rik; IL-10R2; CRF2-4; Il10r2; D21S58h; Crfb4; AI528744
Mus musculus	RefSeq	ILMN_220625	ILMN_220625	RNF141	NM_025999.2	NM_025999.2		67150	84781807	NM_025999.2	Rnf141	NP_080275.2	ILMN_1229687	003890291	S	1683	CCTCCTCACCAAGCAGTTGTAAAACCCTAAACTCCAGACCTTGATTGGCT	7	-	117959331-117959380	7qF1	Mus musculus ring finger protein 141 (Rnf141), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AU022812; ZNF230; 2610110L04Rik; AA792898; ZFP36	AU022812; ZNF230; 2610110L04Rik; AA792898; ZFP36
Mus musculus	MEEBO	ILMN_184485	ILMN_184485	SCL000022.1_12_REVCOMP	scl000022.1_12_REVCOMP						scl000022.1_12_REVCOMP		ILMN_1213245	000780148	S	20	CAATAAATACAGCTGAGTTAGCTTTCCAACCCGATCTCCTTAAGAAAGGG										
Mus musculus	RefSeq	ILMN_200186	ILMN_200186	LOC385885	XM_358984.1	XM_358984.1			38080844	XM_358984.1	LOC385885		ILMN_1250753	003890435	S	314	GTGAGGGCGGCTCCCCACAACAACTCACAGACCATATGGAGCTTAGAAGG										
Mus musculus	Riken	ILMN_206241	ILMN_206241	B130055B01RIK	ri|B130055B01|PX00158I10|AK080784|1384					AK080784	B130055B01Rik		ILMN_2578645	001170427	S	747	AAAGAGTACTCTGGCATCTGACACTCAGGAGAGAGCTGGGCTCCCAGGAC										
Mus musculus	RefSeq	ILMN_220265	ILMN_238158	PENK1	NM_001002927.2	NM_001002927.2		18619	141801808	NM_001002927.2	Penk1	NP_001002927.1	ILMN_2719921	002260520	S	824	AGAGAGCACCAACAATGACGAAGACATGAGCAAGAGGTATGGGGGCTTCA	4	-	4061221-4061270	4qA1	Mus musculus preproenkephalin 1 (Penk1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]	Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect [goid 1515] [evidence IEA]	AI326464; PPA; ENK; Penk	AI326464; PPA; ENK; Penk
Mus musculus	RefSeq	ILMN_209691	ILMN_209691	DDB2	NM_028119.2	NM_028119.2		107986	29150250	NM_028119.2	Ddb2	NP_082395.2	ILMN_2791769	004900474	S	1377	GGGAGACACACTGGCCTCTACTATGGGTTATCATATTCTCATTTGGAGCC	2	-	91012825-91012851:91013119-91013141	2qE1	Mus musculus damage specific DNA binding protein 2 (Ddb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The repair of UV-induced T-T, C-T and C-C dimers [goid 6290] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC117576; 2610043A19Rik	MGC117576; 2610043A19Rik
Mus musculus	RefSeq	ILMN_216417	ILMN_216417	5730470L24RIK	NM_025679.3	NM_025679.3		66641	141803299	NM_025679.3	5730470L24Rik	NP_079955.1	ILMN_2670897	000670243	S	2730	TAATTTACCACTGAAGTCTATTTCCATGTTTCTTAAAATGCACCTAATGA	3	+	102807769-102807818	3qF2.2	Mus musculus RIKEN cDNA 5730470L24 gene (5730470L24Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			AI839862; 2810005O12Rik	AI839862; 2810005O12Rik
Mus musculus	MEEBO	ILMN_213811	ILMN_213811	9330104G04RIK	scl0320950.1_233				51743313	XM_489165	9330104G04Rik		ILMN_2641050	006760768	S	550	GCGGCCAGCATGTGTCACTACACCCGGTGTGTCGGCAACGTTTGTGAAAT										
Mus musculus	MEEBO	ILMN_213811	ILMN_213811	9330104G04RIK	scl0320950.1_233				51743313	XM_489165	9330104G04Rik		ILMN_1255975	006650551	S	1683	CAAAGACGAACTTGCTGCACAAACACAGGACTGGTACTTGGATCCCCACG										
Mus musculus	RefSeq	ILMN_215694	ILMN_215694	SGK2	NM_013731.1	NM_013731.1		27219	7305482	NM_013731.1	Sgk2	NP_038759.1	ILMN_2827081	000380008	S	2295	GAGAGAAAGGGGAGGATGTAGGTGACCAGCACTCTGGGAGAGAGCCTCTT	2	+	162839681-162839730	2qH2	Mus musculus serum/glucocorticoid regulated kinase 2 (Sgk2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Sgkl; AW146006; AI098171	Sgkl; AW146006; AI098171
Mus musculus	RefSeq	ILMN_215694	ILMN_215694	SGK2	NM_013731.1	NM_013731.1		27219	7305482	NM_013731.1	Sgk2	NP_038759.1	ILMN_2827080	003520519	S	2184	GGCTGCCCAGAAACCGTCTGGTGGCTTCCTTTAGTGTGTCGTAAATCTCC	2	+	162839570-162839619	2qH2	Mus musculus serum/glucocorticoid regulated kinase 2 (Sgk2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Sgkl; AW146006; AI098171	Sgkl; AW146006; AI098171
Mus musculus	RefSeq	ILMN_209813	ILMN_209813	ABPG	NM_194338.1	NM_194338.1		110187	45331197	NM_194338.1	Abpg	NP_919319.1	ILMN_2599449	006940669	S	260	GTTATCTCTATACTTAAGCCCAGAATGCAAGAAATACTATGGCGATGACA	7	-	34728231-34728280	7qB1	Mus musculus androgen binding protein gamma (Abpg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Scgb2b4; MGC130244; MGC130243; C2d	Scgb2b4; MGC130244; MGC130243; C2d
Mus musculus	RefSeq	ILMN_223616	ILMN_252697	SIPA1L2	NM_001081337.1	NM_001081337.1		244668	124487492	NM_001081337.1	Sipa1l2	NP_001074806.1	ILMN_2766592	000270435	S	5966	TTGTAGTTGCTCTGCTGCAGTCAGTCAGTCTACCCTCCCCGATAGAGCCC	8	-	127942312-127942361	8qE2	Mus musculus signal-induced proliferation-associated 1 like 2 (Sipa1l2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC058408; mKIAA1389	BC058408; mKIAA1389
Mus musculus	Riken	ILMN_206891	ILMN_206891	E030040N07RIK	ri|E030040N07|PX00206D03|AK087267|2422					AK087267	E030040N07Rik		ILMN_1215366	001470181	S	2007	GACCCTGCCCAACCACCCACATCATATGTGTAGAGCTAGCATGTGCTCTG										
Mus musculus	MEEBO	ILMN_186351	ILMN_186351	C330005L02RIK	scl35480.11_267				31559974	NM_138756	C330005L02Rik		ILMN_2434798	005340040	S	5	TACCAGCATTAGGCTGTGTGTAGAACAGACTGCATTGTTCTGAGTTACGC										
Mus musculus	RefSeq	ILMN_241077	ILMN_241077	PTPLB	NM_023587.2	NM_023587.2		70757	84872190	NM_023587.2	Ptplb	NP_076076.2	ILMN_2945551	004070554	S	3114	GAAAGTCTAAAGCAAACTGAGCAAGAGGACAGTGTGGATGGTGCCCGGCC	16	+	35108772-35108821	16qB3	Mus musculus protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b (Ptplb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI481689; AI255777; 6330408J20Rik	AI481689; AI255777; 6330408J20Rik
Mus musculus	RefSeq	ILMN_185813	ILMN_246039	TMEM2	NM_001033759.1	NM_001033759.1		83921	76253921	NM_001033759.1	Tmem2	NP_001028931.1	ILMN_2430220	006770719	S	4982	TGCTCAGTCCTGCGCTAACTCCAGTCGCTGCCCTGTTCAGTGATGTCTGG	19	+	21931214-21931263	19qB	Mus musculus transmembrane protein 2 (Tmem2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC102198; mKIAA1412; 3110012M15Rik	MGC102198; mKIAA1412; 3110012M15Rik
Mus musculus	RefSeq	ILMN_185813	ILMN_246039	TMEM2	NM_001033759.1	NM_001033759.1		83921	76253921	NM_001033759.1	Tmem2	NP_001028931.1	ILMN_1250486	002570142	S	5119	GCCTGGTCATGTGCTCTTTTTATTCACTTGTATACTGATTACTTTTGAGG	19	+	21931351-21931400	19qB	Mus musculus transmembrane protein 2 (Tmem2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC102198; mKIAA1412; 3110012M15Rik	MGC102198; mKIAA1412; 3110012M15Rik
Mus musculus	RefSeq	ILMN_191116	ILMN_237624	2700023E23RIK	XM_915679.2	XM_915679.2		70036	94374589	XM_915679.2	2700023E23Rik	XP_920772.2	ILMN_1230037	006660471	S	224	TCGAAGCTGAAATAGGTGAAGTGAGGGCCATGTGAGTTTCCTTGAATGGC				5qC3.3	PREDICTED: Mus musculus RIKEN cDNA 2700023E23 gene (2700023E23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199369	ILMN_199370	OBOX5	NM_145709.2	NM_145709.2		252829	125490389	NM_145709.2	Obox5	NP_663755.2	ILMN_2772986	004760139	S	320	CAGTCCCTGAAAGGAACCTACTTCAGCAAGAGTCTGAAGGATCATCAAGA	7	+	16343046-16343095	7qA2	Mus musculus oocyte specific homeobox 5 (Obox5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C87544	C87544
Mus musculus	RefSeq	ILMN_199370	ILMN_199370	OBOX5	NM_145709.2	NM_145709.2		252829	125490389	NM_145709.2	Obox5	NP_663755.2	ILMN_1218255	002070445	S	912	GACTGACATAGCAGTAGCTGAAGCTCCAGTCAGGCTGGCATATGCTGCCC	7	+	16344223-16344272	7qA2	Mus musculus oocyte specific homeobox 5 (Obox5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C87544	C87544
Mus musculus	RefSeq	ILMN_201135	ILMN_201135	LOC382026	XM_356096.1	XM_356096.1			38089358	XM_356096.1	LOC382026		ILMN_1236569	004150519	S	5	CAGCCAGGAGAGAGGATTGGACACACAGTCTCACCCACAAGACACGGAGT										
Mus musculus	RefSeq	ILMN_220810	ILMN_220810	KRT33A	NM_027983.2	NM_027983.2		71888	141803035	NM_027983.2	Krt33a	NP_082259.1	ILMN_1235868	006110767	S	1322	GTAATGCCACCCCTTCCCAAGTCCTCAAAGAGTCACCGCACTGGACAAAG	11	-	99872820-99872869	11qD	Mus musculus keratin 33A (Krt33a), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2310015J09Rik	2310015J09Rik
Mus musculus	RefSeq	ILMN_233131	ILMN_233131	OLFR1282	NM_146907.1	NM_146907.1		258909	49227583	NM_146907.1	Olfr1282	NP_667118.1	ILMN_2788613	001170010	S	754	GGGCCCATCATTTTTATCTATCTGTGGCCAGTCAGCATCACCTGGGTTGA	2	-	111175430-111175479	2qE3	Mus musculus olfactory receptor 1282 (Olfr1282), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR248-2	MOR248-2
Mus musculus	MEEBO	ILMN_185860	ILMN_185860	2610034E13RIK	scl31407.22_35				20149311	NM_029365	2610034E13Rik		ILMN_2612090	001030091	S	256	GTGGACTGCGCTCCAGAGTCCTATGTACAATGTCACGCACCTACCAGCAG										
Mus musculus	MEEBO	ILMN_185860	ILMN_185860	2610034E13RIK	scl31407.22_35				20149311	NM_029365	2610034E13Rik		ILMN_2612091	006380075	S	258	GGACTGCGCTCCAGAGTCCTATGTACAATGTCACGCACCTACCAGCAGTG										
Mus musculus	RefSeq	ILMN_208867	ILMN_208867	STAMBP	NM_024239.1	NM_024239.1		70527	17941276	NM_024239.1	Stambp	NP_077201.1	ILMN_1218176	001300719	S	1977	GGTGGGATGTGCATGAGGCGTTCACAGCCCCCATACATGGATCTTGTTTA	6	-	83493261-83493310	6qC3	Mus musculus Stam binding protein (Stambp), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	mKIAA4198; 5730422L11Rik; Amsh; 5330424L14Rik; KIAA4198; AW107289	mKIAA4198; 5730422L11Rik; Amsh; 5330424L14Rik; KIAA4198; AW107289
Mus musculus	MEEBO	ILMN_211677	ILMN_211677	TARDBP	scl0230908.3_49	NM_145556.2			31543841	NM_145556.2	Tardbp		ILMN_1244811	004120626	S	3809	TGGTAACATTAAAATGGTTTTCGGGGACCTCCAAAGACGGCCAGGAGTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212870	ILMN_212870	1700019G17RIK	NM_029331.2	NM_029331.2		75541	40254166	NM_029331.2	1700019G17Rik	NP_083607.2	ILMN_2758803	005960398	S	2811	GCTCAGGAGACTCTGGAGAGCGTTCCTCTCTGATGTCACCCAGGCAGTAA	6	-	85849203-85849252	6qC3	Mus musculus RIKEN cDNA 1700019G17 gene (1700019G17Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212870	ILMN_212870	1700019G17RIK	NM_029331.2	NM_029331.2		75541	40254166	NM_029331.2	1700019G17Rik	NP_083607.2	ILMN_2631180	006220630	S	1192	CTTGGGGATCAGGGATGTGACCTGTTATCCTTTGTTTGCCTTGGAGGCTC	6	-	85850822-85850852:85850853-85850871	6qC3	Mus musculus RIKEN cDNA 1700019G17 gene (1700019G17Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212870	ILMN_212870	1700019G17RIK	NM_029331.2	NM_029331.2		75541	40254166	NM_029331.2	1700019G17Rik	NP_083607.2	ILMN_2631179	002360201	S	1190	GCTTGGGGATCAGGGATGTGACCTGTTATCCTTTGTTTGCCTTGGAGGCT	6	-	85850824-85850852:85850853-85850873	6qC3	Mus musculus RIKEN cDNA 1700019G17 gene (1700019G17Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212870	ILMN_212870	1700019G17RIK	NM_029331.2	NM_029331.2		75541	40254166	NM_029331.2	1700019G17Rik	NP_083607.2	ILMN_2695190	004290341	S	2616	ATTGCAGAGAATACGTGACTGATCCTTTGATATAGCCCAATATTGGGCCA	6	-	85849398-85849447	6qC3	Mus musculus RIKEN cDNA 1700019G17 gene (1700019G17Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_258620	ILMN_258620	EG545370	NM_001024720.1	NM_001024720.1		545370	85701545	NM_001024720.1	EG545370	NP_001019891.1	ILMN_2926311	000060719	S	3284	CTGTGAACCTCTGAGCACAAGAGCCCCATAGTTCTCACGTAGCCTGTGCT	1	-	152636032-152636081	1qG1	Mus musculus predicted gene, EG545370 (EG545370), mRNA.					
Mus musculus	RefSeq	ILMN_215698	ILMN_215698	HSP90AA1	NM_010480.3	NM_010480.3		15519	42476088	NM_010480.3	Hsp90aa1	NP_034610.1	ILMN_2662557	004850296	S	17	CTTCTGGAAAGAAGCGCCGCGCGCTGGGCGGGCCCGCCTCTATATAAGGC	12	-	111144136-111144185	12qF1	Mus musculus heat shock protein 90kDa alpha (cytosolic), class A member 1 (Hsp90aa1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cytotoxic T cell differentiation [goid 45585] [evidence TAS]; The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones [goid 42026] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence TAS]; Modulates the activity of nitric oxide synthase [goid 30235] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Hspca; AL024080; AL024147; Hsp89; Hsp86-1; hsp4; Hsp90; 86kDa; 89kDa	Hspca; AL024080; AL024147; Hsp89; Hsp86-1; hsp4; Hsp90; 86kDa; 89kDa
Mus musculus	RefSeq	ILMN_198471	ILMN_198471	LOC209202	XM_145058.3	XM_145058.3			38085381	XM_145058.3	LOC209202		ILMN_2531810	001190468	S	1984	GGGTTTTGGGAAAGGGGCACAGAATTGCCCTGCAGGAGAAAAAGAGAGCC										
Mus musculus	RefSeq	ILMN_217459	ILMN_217459	GAS7	NM_008088.2	NM_008088.2		14457	142389036	NM_008088.2	Gas7	NP_032114.1	ILMN_2683424	001850280	S	374	ACCCCGGCGCACCCTCCAGAGACTGCCCACATGAGTCTCCGAAAATCCAC	11	+	67473549-67473598	11qB3	Mus musculus growth arrest specific 7 (Gas7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites [goid 48812] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	AW124766; Gas7-cb	AW124766; Gas7-cb
Mus musculus	Riken	ILMN_201930	ILMN_201930	MSH5	ri|5430414C05|PX00022P03|AK017308|856					AK017308	Msh5		ILMN_2545718	005310433	S	806	TGTAGGTGACTCATCCAAACCTCAACCAAAGTAAAGAGGACTGGGAGGTC						A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IMP]; Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells [goid 7127] [evidence IMP]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]		
Mus musculus	Riken	ILMN_204804	ILMN_204804	MYO5A	ri|6720408E05|PX00059I07|AK032713|1920					AK032713	Myo5a		ILMN_1259456	002120682	S	1687	GTAATGTAGAGGCTTACAGCAGGGGGCTCACCATGAGTTTGAGGCAGGCC						Any complex of actin, myosin, and accessory proteins [goid 42641] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 6582] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IDA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; Movement of a vesicle along an actin filament, mediated by motor proteins [goid 30050] [evidence TAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence IDA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process by which endoplasmic reticulum is transported to, and/or maintained in, a specific location within the cell [goid 51643] [evidence IMP]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IMP]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IDA]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement [goid 31987] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence ISA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of the IP3 receptor [goid 31585] [evidence IMP]; Any process by which a secretory granule is transported to, and/or maintained in, a specific location within the cell [goid 32252] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the plus end of a microtubule [goid 51010] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200362	ILMN_200362	LOC386321	XM_359169.1	XM_359169.1			38081428	XM_359169.1	LOC386321		ILMN_1255372	006330097	S	724	CAGGCTCCTAGAGGGGAGGTAGAAAGTGTAGTCCATGAGGAAATTCGCTA										
Mus musculus	RefSeq	ILMN_221566	ILMN_224612	SCRN3	NM_029022.1	NM_029022.1		74616	61969659	NM_029022.1	Scrn3	NP_083298.1	ILMN_1217164	000010187	S	2961	AAAAAAGAATTTAAACAGGTCTTTCTACAGAAATGTAAGGTTGAATAAAT	2	+	73175578-73175627	2qC3	Mus musculus secernin 3 (Scrn3), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]	Ses3; AI427019; AV002033; 4833415E20Rik	Ses3; AI427019; AV002033; 4833415E20Rik
Mus musculus	Riken	ILMN_206664	ILMN_206664	PARG	ri|A630047F13|PX00146A12|AK080306|804					AK080306	Parg		ILMN_1223185	007000167	S	181	GCGCCGAGAAGGAGGCGCAGTCCGTCCCTGTCCGGTTTTCAAACAAAAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IMP]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of poly(ADP-ribose) at glycosidic (1''-2') linkage of ribose-ribose bond to produce free ADP-ribose [goid 4649] [evidence IMP]		
Mus musculus	RefSeq	ILMN_207464	ILMN_207464	1700052N19RIK	NM_024261.1	NM_024261.1			13195679	NM_024261.1	1700052N19Rik		ILMN_2590231	000630026	S	410	GTATCGGAGAATTCATGAAGCCATCATGCAGAGGCAAGTGTACAGCCAGT										
Mus musculus	RefSeq	ILMN_200861	ILMN_259885	EG434168	XM_973360.2	XM_973360.2		434168	149274764	XM_973360.2	EG434168	XP_978454.2	ILMN_1242672	001430338	S	18	GGTTCAGAAGGGCCCCCTAAAGCTGAAAGGCGTGGCGGAGCTTGGTGTGA				7qB3	PREDICTED: Mus musculus predicted gene, EG434168 (EG434168), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_213535	ILMN_213535	VASH1	NM_177354.3	NM_177354.3		238328	142368240	NM_177354.3	Vash1	NP_796328.1	ILMN_2713769	004670500	S	2255	CTCCTTCTCCCACCAAGGACCGGAAGAAGGATGTTTCCTCCCCACAGAGG	12	+	88031832-88031881	12qD2	Mus musculus vasohibin 1 (Vash1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence ISA]		G630009D10Rik	G630009D10Rik
Mus musculus	RefSeq	ILMN_213535	ILMN_213535	VASH1	NM_177354.3	NM_177354.3		238328	142368240	NM_177354.3	Vash1	NP_796328.1	ILMN_1246239	000620743	S	2380	AAAGCCATGCCAGACCTCAGTGGGTACCAGATCCGGGTGTGAGGCAGATG	12	+	88032822-88032858:88032859-88032871	12qD2	Mus musculus vasohibin 1 (Vash1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence ISA]		G630009D10Rik	G630009D10Rik
Mus musculus	RefSeq	ILMN_211971	ILMN_211971	PLXDC1	NM_028199.2	NM_028199.2		72324	31560780	NM_028199.2	Plxdc1	NP_082475.2	ILMN_2827162	002450500	S	2728	CCAGGACGGCTTCTAAAGGACAATGAAAACCTAGAGCTCACCTTCATCCC	11	-	97784591-97784640	11qD	Mus musculus plexin domain containing 1 (Plxdc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]			Tem7; AI848450; MGC130377; 2410003I07Rik	Tem7; AI848450; MGC130377; 2410003I07Rik
Mus musculus	RefSeq	ILMN_211971	ILMN_211971	PLXDC1	NM_028199.2	NM_028199.2		72324	31560780	NM_028199.2	Plxdc1	NP_082475.2	ILMN_1248298	007570619	S	2294	ATCAACGGCAGTAGTTTCCTTCAAAGAGGGGGACAATTTACCTGGCTCCT	11	-	97785025-97785074	11qD	Mus musculus plexin domain containing 1 (Plxdc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]			Tem7; AI848450; MGC130377; 2410003I07Rik	Tem7; AI848450; MGC130377; 2410003I07Rik
Mus musculus	RefSeq	ILMN_218214	ILMN_218214	HHAT	NM_144881.3	NM_144881.3		226861	141802754	NM_144881.3	Hhat	NP_659130.2	ILMN_1235623	006400195	S	1406	CCTCCATGCTCATCCTCTTCAACCTGGTGTTCCTCGGGGGAATTCAAGTT	1	-	194376854-194376903	1qH6	Mus musculus hedgehog acyltransferase (Hhat), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IMP]	2810432O22Rik; AI462858; Skn; MGC11697	2810432O22Rik; AI462858; Skn; MGC11697
Mus musculus	RefSeq	ILMN_218214	ILMN_218214	HHAT	NM_144881.3	NM_144881.3		226861	141802754	NM_144881.3	Hhat	NP_659130.2	ILMN_2693022	006270349	S	2368	CCATGGAGGAACATGGTGGTTCCTCTCACAGCTGTTCTGCACAGAAGTGG	1	-	194336929-194336978	1qH6	Mus musculus hedgehog acyltransferase (Hhat), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IMP]	2810432O22Rik; AI462858; Skn; MGC11697	2810432O22Rik; AI462858; Skn; MGC11697
Mus musculus	RefSeq	ILMN_184255	ILMN_184255	TMPRSS8	NM_013921.2	NM_013921.2		30943	24496767	NM_013921.2	Tmprss8	NP_038949.2	ILMN_1258386	007200670	S	978	CTGTGAGCTCTAGAGTTCTAGATCCTCTTCTGCTGGGCTCGGAGACTCAG	17	-	24109519-24109568	17qA3.3	Mus musculus transmembrane protease, serine 8 (intestinal) (Tmprss8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence ISA]	Disp1; 2010015P21Rik; Disp	Disp1; 2010015P21Rik; Disp
Mus musculus	RefSeq	ILMN_217599	ILMN_217599	GRIP1	NM_130891.1	NM_130891.1		74053	19263333	NM_130891.1	Grip1	NP_570961.1	ILMN_2685318	006040411	S	3113	CAGCAACCCAGCCACGGTGGTAATCTAGAGACACGAGAACCCACTAACAC	10	+	119512516-119512565	10qD2	Mus musculus glutamate receptor interacting protein 1 (Grip1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4931400F03Rik; eb; KIAA4223; mKIAA4223	4931400F03Rik; eb; KIAA4223; mKIAA4223
Mus musculus	RefSeq	ILMN_217599	ILMN_217599	GRIP1	NM_130891.1	NM_130891.1		74053	19263333	NM_130891.1	Grip1	NP_570961.1	ILMN_3126646	000380253	A	2952	GTGCGGACGAGAGACTTTGACTGCTGCCTGGTGGTGCCTCTCATAGCTGA	10	+	119512355-119512404	10qD2	Mus musculus glutamate receptor interacting protein 1 (Grip1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4931400F03Rik; eb; KIAA4223; mKIAA4223	4931400F03Rik; eb; KIAA4223; mKIAA4223
Mus musculus	RefSeq	ILMN_199504	ILMN_254877	LOC631924	XM_905877.3	XM_905877.3		631924	149246457	XM_905877.3	LOC631924	XP_910970.3	ILMN_1243021	002060279	S	2851	GTGTTTCTCAAGGCTTCACTGGAAAACGCTGGTTCTGCTCCACAGGCCCA					PREDICTED: Mus musculus similar to Kinesin-Like Protein family member (klp-6) (LOC631924), mRNA.					
Mus musculus	RefSeq	ILMN_217044	ILMN_217044	GJA5	NM_008121.2	NM_008121.2		14613	46575906	NM_008121.2	Gja5	NP_032147.1	ILMN_2691641	000360133	S	2783	CCCATCTCTGGGTCCCTCTGCTGGCATTTGGTTGCTACTAATGGATAGAA	3	+	96857231-96857280	3qF2.1	Mus musculus gap junction membrane channel protein alpha 5 (Gja5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]		Cnx40; Gja-5; Cx40; 5730555N10Rik	Cnx40; Gja-5; Cx40; 5730555N10Rik
Mus musculus	RefSeq	ILMN_217044	ILMN_217044	GJA5	NM_008121.2	NM_008121.2		14613	46575906	NM_008121.2	Gja5	NP_032147.1	ILMN_2908132	004390634	S	2860	GGAAGACGGGCTGTTCCAGTCCCAGTGCATTTCATCCATTCCCGACACTG	3	+	96857308-96857357	3qF2.1	Mus musculus gap junction membrane channel protein alpha 5 (Gja5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]		Cnx40; Gja-5; Cx40; 5730555N10Rik	Cnx40; Gja-5; Cx40; 5730555N10Rik
Mus musculus	RefSeq	ILMN_217044	ILMN_217044	GJA5	NM_008121.2	NM_008121.2		14613	46575906	NM_008121.2	Gja5	NP_032147.1	ILMN_2678477	000450010	S	6	AGTGGGCAGTTGAACAGCAGCCAGAGCCTGAAGAAGCCAACTCCAGGGAG	3	+	96836344-96836393	3qF2.1	Mus musculus gap junction membrane channel protein alpha 5 (Gja5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]		Cnx40; Gja-5; Cx40; 5730555N10Rik	Cnx40; Gja-5; Cx40; 5730555N10Rik
Mus musculus	RefSeq	ILMN_217044	ILMN_217044	GJA5	NM_008121.2	NM_008121.2		14613	46575906	NM_008121.2	Gja5	NP_032147.1	ILMN_2908133	004290204	S	2722	AAGATCAGGCATGAGAAGTTCAGGAGGGTGAAGGGTCAGAGGTCAGTCCC	3	+	96857170-96857219	3qF2.1	Mus musculus gap junction membrane channel protein alpha 5 (Gja5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]		Cnx40; Gja-5; Cx40; 5730555N10Rik	Cnx40; Gja-5; Cx40; 5730555N10Rik
Mus musculus	Riken	ILMN_204995	ILMN_204995	ODZ1	ri|9330172M18|PX00106G03|AK034286|4556					AK034286	Odz1		ILMN_2569199	000240382	S	3071	GAGACATGGCCTTTGATGGCCTCCATGATTCTTGCTTAGAAATCCTCATC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]			
Mus musculus	MEEBO	ILMN_218401	ILMN_218401	3110027P15RIK	scl45157.6.1_89				51768637	XM_488727	3110027P15Rik		ILMN_2695376	004780392	S	2036	ATATCAACACTACCACTATGGATTCAGAAGTTTCTAACCTTTCTATAAAA										
Mus musculus	RefSeq	ILMN_196714	ILMN_196714	KLRA3	NM_010648.2	NM_010648.2		16634	133922592	NM_010648.2	Klra3	NP_034778.2	ILMN_1237580	001850553	S	1180	ACGCATCTACTCGGGTGAATGGGCACGCTTTGCCCTAAAGCCTTCAGAAT	6	-	130273367-130273416	6qF3	Mus musculus killer cell lectin-like receptor, subfamily A, member 3 (Klra3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Nk2.1; 5E6; MGC123910; NK-2.1; Nk-2; Ly49c; Nk2	Nk2.1; 5E6; MGC123910; NK-2.1; Nk-2; Ly49c; Nk2
Mus musculus	RefSeq	ILMN_196714	ILMN_196714	KLRA3	NM_010648.2	NM_010648.2		16634	133922592	NM_010648.2	Klra3	NP_034778.2	ILMN_2716458	002490221	S	575	TAGATTCCTCACGGGACACAGGCAGAGGTGTTAAATACTGGTTCTGCTAT	6	-	130280250-130280279:130283153-130283172	6qF3	Mus musculus killer cell lectin-like receptor, subfamily A, member 3 (Klra3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Nk2.1; 5E6; MGC123910; NK-2.1; Nk-2; Ly49c; Nk2	Nk2.1; 5E6; MGC123910; NK-2.1; Nk-2; Ly49c; Nk2
Mus musculus	RefSeq	ILMN_219030	ILMN_239805	OLFR983	NM_146827.1	NM_146827.1		258824	22129202	NM_146827.1	Olfr983	NP_667038.1	ILMN_1256987	000360647	S	637	CCCAGTCTCACCGTCTTTATTTCTTATACCTTGATCCTCTCCAATATCCT	9	-	39899863-39899912	9qA5.1	Mus musculus olfactory receptor 983 (Olfr983), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR162-1	MOR162-1
Mus musculus	RefSeq	ILMN_221133	ILMN_221133	D4WSU53E	NM_023665.3	NM_023665.3		27981	148539954	NM_023665.3	D4Wsu53e	NP_076154.3	ILMN_2731439	002030441	S	898	GAAAAGCAGACTGAAGATGCAACTAAAAATACCAGTGAAAAGTCTTCTAC				4qD3	Mus musculus DNA segment, Chr 4, Wayne State University 53, expressed (D4Wsu53e), mRNA.				D4Ucla2; 2700043I21Rik	D4Ucla2; 2700043I21Rik
Mus musculus	RefSeq	ILMN_223306	ILMN_223306	CRISPLD1	NM_031402.2	NM_031402.2		83691	123173745	NM_031402.2	Crispld1	NP_113579.2	ILMN_1230529	004560202	S	2315	CTTTTAAGTCACTTTTGTTTTTCAAACCAGTCCAGTATTCAGTTCTGACC	1	+	17754597-17754646	1qA3	Mus musculus cysteine-rich secretory protein LCCL domain containing 1 (Crispld1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lcrisp1; Cocoacrisp	Lcrisp1; Cocoacrisp
Mus musculus	MEEBO	ILMN_188453	ILMN_188453	SKD3	scl32293.21.11_271				31543714	NM_009191	Skd3		ILMN_2452811	006330326	S	16	GCATTTAGAAAACCCAAAGGCAGTTGTAAAAGCTTAACTTGGTGACTGAC										
Mus musculus	RefSeq	ILMN_217815	ILMN_217815	PLCB2	NM_177568.2	NM_177568.2		18796	61676178	NM_177568.2	Plcb2	NP_808236.2	ILMN_2922899	006900465	S	4805	CCCCAAACCTTTGAGCCGTCTGGGCCTCTTTAGGAACACCGAGAGTGACC	2	-	118533543-118533592	2qE5	Mus musculus phospholipase C, beta 2 (Plcb2), mRNA.		The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The series of events required to receive a bitter taste stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50913] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]	B230205M18Rik; B230399N12; AI550384	B230205M18Rik; B230399N12; AI550384
Mus musculus	RefSeq	ILMN_201659	ILMN_240009	SRGAP2	XM_977299.1	XM_977299.1		14270	94365527	XM_977299.1	Srgap2	XP_982393.1	ILMN_1222560	001580743	S	3299	CATCTCAAGGGGCCAGACACCAAGTCCTACAGACCTCTTTCCGCCAGACC				1qE4	PREDICTED: Mus musculus SLIT-ROBO Rho GTPase activating protein 2, transcript variant 3 (Srgap2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216255	ILMN_216255	NOLA3	NM_025403.2	NM_025403.2		66181	142373287	NM_025403.2	Nola3	NP_079679.1	ILMN_2669023	000050736	S	44	CTGAGGGCAGTTATGTTTCTCCAATATTACCTCAACGAGCAGGGCGATCG	2	+	112102169-112102180:112102181-112102218	2qE3	Mus musculus nucleolar protein family A, member 3 (Nola3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	NOP10; 1110036B12Rik; NOP10P	NOP10; 1110036B12Rik; NOP10P
Mus musculus	RefSeq	ILMN_252541	ILMN_252541	OTTMUSG00000003802	NM_001004166.1	NM_001004166.1		432615	51921330	NM_001004166.1	OTTMUSG00000003802	NP_001004166.1	ILMN_2943027	004050070	S	1964	AGAGTCCAGGAAAGTTGATGGCGGTAGGAGTAGGGGCAGGTGCAGTACAG	11	+	117304757-117304806		Mus musculus predicted gene, OTTMUSG00000003802 (OTTMUSG00000003802), mRNA.					
Mus musculus	RefSeq	ILMN_219962	ILMN_219962	HMGA1	NM_016660.2	NM_016660.2		15361	86198322	NM_016660.2	Hmga1	NP_057869.2	ILMN_3105657	000070102	A	1754	TATTCTCTCCCCCACACAATACACTCGAGGGGAAGGGGGGCTGGGGCGCA	17	+	27699860-27699909	17qA3.3	Mus musculus high mobility group AT-hook 1 (Hmga1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Hmgiy; MGC102580; AL023995; HMGY; HMGI(Y); Hmga1a; HMG-I(Y); Hmgi; Hmga1b	Hmgiy; MGC102580; AL023995; HMGY; HMGI(Y); Hmga1a; HMG-I(Y); Hmgi; Hmga1b
Mus musculus	RefSeq	ILMN_219962	ILMN_219962	HMGA1	NM_016660.2	NM_016660.2		15361	86198322	NM_016660.2	Hmga1	NP_057869.2	ILMN_3032191	003180674	I	178	GAATCTAATCACATTATTATTTATTGAGGCCGCGCACGGGCCGTGCCCAG	17	+	27693704-27693753	17qA3.3	Mus musculus high mobility group AT-hook 1 (Hmga1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Hmgiy; MGC102580; AL023995; HMGY; HMGI(Y); Hmga1a; HMG-I(Y); Hmgi; Hmga1b	Hmgiy; MGC102580; AL023995; HMGY; HMGI(Y); Hmga1a; HMG-I(Y); Hmgi; Hmga1b
Mus musculus	RefSeq	ILMN_219962	ILMN_219962	HMGA1	NM_016660.2	NM_016660.2		15361	86198322	NM_016660.2	Hmga1	NP_057869.2	ILMN_2715802	006980274	S	1712	GCTGCTACCAGCGTCAGATGTTCATCCTCCTGAATTTGCCTGTATTCTCT	17	+	27699818-27699867	17qA3.3	Mus musculus high mobility group AT-hook 1 (Hmga1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Hmgiy; MGC102580; AL023995; HMGY; HMGI(Y); Hmga1a; HMG-I(Y); Hmgi; Hmga1b	Hmgiy; MGC102580; AL023995; HMGY; HMGI(Y); Hmga1a; HMG-I(Y); Hmgi; Hmga1b
Mus musculus	RefSeq	ILMN_211240	ILMN_211240	ALOX12	NM_007440.4	NM_007440.4		11684	145966724	NM_007440.4	Alox12	NP_031466.2	ILMN_2613908	004180717	S	2245	GAGGGCCACCCACTTTCTACCACAATTACTTAGCTTTCTCACTATACCAC				11qB3	Mus musculus arachidonate 12-lipoxygenase (Alox12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,14Z)-(12S)-12-hydroperoxyicosa-5,8,10,14-tetraenoate [goid 4052] [evidence IEA]	9930022G08Rik; Alox12p; P-12LO	9930022G08Rik; Alox12p; P-12LO
Mus musculus	MEEBO	ILMN_190700	ILMN_190700	PCYOX1	scl28753.6_75				31981175	NM_025823	Pcyox1		ILMN_2472504	006940431	S	18	AGCACTCTCGTGGATTCGTACGGTGGATTTGTGCAGCGCGCCTCCTCAGA						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of prenylcysteine, 3-methyl-2-buten-1-yl-cysteine, a derivative of the amino acid cysteine formed by the covalent addition of a prenyl residue [goid 30328] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces oxygen [goid 16670] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: S-prenyl-L-cysteine + O2 + H20 = a prenal + L-cysteine + H202 [goid 1735] [evidence IMP]		
Mus musculus	RefSeq	ILMN_209795	ILMN_255975	MAP1LC3B	NM_026160.3	NM_026160.3		67443	146134961	NM_026160.3	Map1lc3b	NP_080436.1	ILMN_1260033	006900343	S	1599	TCAGTAAGGATTCCTGTAATACTGCTTTAAAGATGCTGCTCAGAGGGCGG				8qE1	Mus musculus microtubule-associated protein 1 light chain 3 beta (Map1lc3b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1010001C15Rik; MGC118046; Map1lc3	1010001C15Rik; MGC118046; Map1lc3
Mus musculus	RefSeq	ILMN_215456	ILMN_215456	MRPL18	NM_026310.1	NM_026310.1		67681	13385807	NM_026310.1	Mrpl18	NP_080586.1	ILMN_2823250	001240152	S	757	GCATTTGGAAGGAGAACCAGACTGAAAGCTTCAGAGCAATAATGTGACTG	17	-	12754439-12754488	17qA1	Mus musculus mitochondrial ribosomal protein L18 (Mrpl18), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]			HSPC071; MRP-L18; 1010001C05Rik; C79879	HSPC071; MRP-L18; 1010001C05Rik; C79879
Mus musculus	Riken	ILMN_204666	ILMN_204666	9430043O10RIK	ri|9430043O10|PX00109O03|AK034826|2381					AK034826	9430043O10Rik		ILMN_2566718	003610747	S	2302	GCACGGGTCCAGCAAAAGCAGATTGGTCCTACCCCCTCCCCCCAAAAAAG										
Mus musculus	RefSeq	ILMN_221283	ILMN_221283	SLCO1A5	NM_130861.2	NM_130861.2		108096	141801812	NM_130861.2	Slco1a5	NP_570931.1	ILMN_1255691	000020647	S	2146	GCACATTGCACTTCCTTTGAATCATGAGAGGTACGAGAGGAACTCTTTTC	6	-	142183092-142183141	6qG2	Mus musculus solute carrier organic anion transporter family, member 1a5 (Slco1a5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of bile acid from one side of the membrane to the other. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 15125] [evidence ISO]	Slc21a7; Oatp3	Slc21a7; Oatp3
Mus musculus	RefSeq	ILMN_208836	ILMN_208836	TCEB1	NM_026456.2	NM_026456.2		67923	31560171	NM_026456.2	Tceb1	NP_080732.1	ILMN_2995698	006590377	S	1506	TATGGTTGCCCCCAGTGGCTGTCCCAGGTCTGTCTGCAAGCCTTCAAAGC	1	-	16627378-16627427	1qA3	Mus musculus transcription elongation factor B (SIII), polypeptide 1 (Tceb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI987979; AA407206; AW049146; 2610043E24Rik; 2610301I15Rik	AI987979; AA407206; AW049146; 2610043E24Rik; 2610301I15Rik
Mus musculus	RefSeq	ILMN_198628	ILMN_198628	LOC245545	XM_141989.3	XM_141989.3			38086530	XM_141989.3	LOC245545		ILMN_2532363	000510224	S	181	CGCATCTGCAGGGACAAGGTCACCCGGCGCTCTCTGGGCTACGCATATGT										
Mus musculus	MEEBO	ILMN_192440	ILMN_192440	9626100_224_RC	9626100_224_rc						9626100_224_rc		ILMN_1244441	005260039	S	1	GGAAGCGCGCGAACAGAAGCGAGAAGCGAACTGATTGGTTAGTTCAAATA										
Mus musculus	MEEBO	ILMN_195769	ILMN_195769	MKIAA0881	scl000190.1_325				37360133	AK129235	mKIAA0881		ILMN_2518545	003890474	S	17	ACCCCGTGGAGGGGCTCTGCTGCTGCTAAGAAACAGTCCTCAACCCCTAA										
Mus musculus	MEEBO	ILMN_188726	ILMN_188726	1110006E14RIK	scl42783.1_729						1110006E14Rik		ILMN_1258966	006900148	S	12	CCTGACACGCTATGTAAATGTCATTCAACCTCTCATCTGGAGGTCACCCC										
Mus musculus	RefSeq	ILMN_212055	ILMN_212055	KRT31	NM_010659.1	NM_010659.1		16660	6754483	NM_010659.1	Krt31	NP_034789.1	ILMN_2622235	006100138	S	1280	ACGTCCCCGCTGTGGGCCATGCAACTCCTTTGTACGCTAGAACCTGGGGG	11	-	99908211-99908220:99908221-99908260	11qD	Mus musculus keratin 31 (Krt31), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MKHA-1; Kha1; Ha1; Krt1-1	MKHA-1; Kha1; Ha1; Krt1-1
Mus musculus	RefSeq	ILMN_191867	ILMN_191867	TNFSF18	NM_183391.2	NM_183391.2		240873	40538843	NM_183391.2	Tnfsf18	NP_899247.2	ILMN_2482910	005080747	S	1694	GCCTGGAGCAAGAAGATCCAGGATACTGTTGGAAGAGTTCATCTCACTCA	1	+	163435049-163435098	1qH2.1	Mus musculus tumor necrosis factor (ligand) superfamily, member 18 (Tnfsf18), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gitrl	Gitrl
Mus musculus	Riken	ILMN_204984	ILMN_204984	SLC11A2	ri|C630004B07|PX00083H04|AK049856|4321					AK049856	Slc11a2		ILMN_1243129	005570113	S	4050	ACAGTAACCTGTAAACATTTCACGCCCCCCACGCAACTCTGCTACCGGCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [evidence IDA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IMP]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IDA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of cobalt (Co) ions from one side of a membrane to the other [goid 15087] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213254	ILMN_311766	LOC100046953	XM_001477127.1	XM_001477127.1		100046953	149257936	XM_001477127.1	LOC100046953	XP_001477177.1	ILMN_2635232	003180114	S	4564	TATTCTGGCTATCTGGCTTTCACGGGCCACGCACAGGTGTGCGAGTGGGA					PREDICTED: Mus musculus similar to Rab6 interacting protein 1 (LOC100046953), mRNA.					
Mus musculus	MEEBO	ILMN_222230	ILMN_222230	A830039N20RIK	scl45825.1.145_22	NM_175545.3			32129247	NM_175545.3	A830039N20Rik		ILMN_2746641	004490754	S	1056	CCATATGCAGAGGTCAGCCTACAACACATTCATTAAGGGAAAAGAGCGTG										
Mus musculus	Riken	ILMN_205199	ILMN_205199	D030011M22RIK	ri|D030011M22|PX00179I14|AK050726|2529					AK050726	D030011M22Rik		ILMN_1238758	006420022	S	2459	TGGCAACCTGCCCGAGGAAGATGGAAATGTTCTGAAGACAGCCTCCCTCC										
Mus musculus	Riken	ILMN_203043	ILMN_203043	SLC2A9	ri|9930113A06|PX00062L11|AK037093|2901					AK037093	Slc2a9		ILMN_2554301	005390678	S	466	GATGCTCATTGTGGGACGGTTCATCATGGGTGTGGATGGAGGCATTGCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IDA]		
Mus musculus	RefSeq	ILMN_187695	ILMN_187695	TSN	NM_011650.3	NM_011650.3		22099	118130098	NM_011650.3	Tsn	NP_035780.1	ILMN_1212998	000540519	S	2891	CAGATGCAATGAACAAATTGCACTTAAAAGTGAAGGAGTATGTTCTAGTG	1	-	120195193-120195242	1qE2.3	Mus musculus translin (Tsn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	2610034C24Rik; TB-RBP; AU040286	2610034C24Rik; TB-RBP; AU040286
Mus musculus	RefSeq	ILMN_187695	ILMN_187695	TSN	NM_011650.3	NM_011650.3		22099	118130098	NM_011650.3	Tsn	NP_035780.1	ILMN_1240067	000160386	S	445	CCAGATCGGGAAAAAGGGTTTCATCTGGATGTGGAAGATTATCTCTCAGG	1	-	120201292-120201341	1qE2.3	Mus musculus translin (Tsn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	2610034C24Rik; TB-RBP; AU040286	2610034C24Rik; TB-RBP; AU040286
Mus musculus	RefSeq	ILMN_184571	ILMN_248439	ZFP383	XM_001003466.1	XM_001003466.1		73729	94380124	XM_001003466.1	Zfp383	XP_001003466.1	ILMN_1228242	001940133	S	2093	TCGCGATGACAAGCCCCATAGCTGTACCGAATGTGGGAAGACGTTTAGTA	7	+	29624458-29624507		PREDICTED: Mus musculus zinc finger protein 383 (Zfp383), mRNA.					
Mus musculus	RefSeq	ILMN_210620	ILMN_252704	DPPA2	NM_028615.1	NM_028615.1		73703	58037334	NM_028615.1	Dppa2	NP_082891.1	ILMN_2607458	001170725	S	1685	GCCTGTACAATACCACTTAGCCAGTACTGATGTATGTTTGACTAGTATAG	16	+	48319370-48319419	16qB5	Mus musculus developmental pluripotency associated 2 (Dppa2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D19Mgi18; C80932; 2410088E07Rik	D19Mgi18; C80932; 2410088E07Rik
Mus musculus	RefSeq	ILMN_219751	ILMN_252704	DPPA2	NM_028615.1	NM_028615.1		73703	58037334	NM_028615.1	Dppa2	NP_082891.1	ILMN_1222929	006250014	S	6	GAAGGTGTGGCTGGCTTTTGATTTACTTAAGAACTCAGCTTTTTGCTATC	16	+	48310392-48310441	16qB5	Mus musculus developmental pluripotency associated 2 (Dppa2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D19Mgi18; C80932; 2410088E07Rik	D19Mgi18; C80932; 2410088E07Rik
Mus musculus	RefSeq	ILMN_204127	ILMN_316589	B130024G19RIK	XR_035360.1	XR_035360.1		434198	149257362	XR_035360.1	B130024G19Rik		ILMN_1232469	001340576	S	176	GGTGACCTCAGAGCCAAGAGCATCATGGGGTAGAGTATCTTGTTCCCAGT				7qD1	PREDICTED: Mus musculus RIKEN cDNA B130024G19 gene (B130024G19Rik), misc RNA.					
Mus musculus	Riken	ILMN_202823	ILMN_202823	9230104O11RIK	ri|9230104O11|PX00061N03|AK033758|2085					AK033758	9230104O11Rik		ILMN_1225837	001500471	S	1638	TCCTCTGTCTTGGATGCTGACTCCTTCCTACCCAACATCAGATACCAAAC										
Mus musculus	RefSeq	ILMN_245895	ILMN_245895	FXYD1	NM_052991.2	NM_052991.2		56188	37577138	NM_052991.2	Fxyd1	NP_443717.1	ILMN_3108783	001500544	A	258	GCAAATTCAACCAACAGCAGAGAACTGGGGAACCCGACGAAGAGGAGGGA	7	-	31837169-31837196:31838044-31838065	7qB1	Mus musculus FXYD domain-containing ion transport regulator 1 (Fxyd1), transcript variant 5, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]	0610012C17Rik; PML; PLM; 1110006M24Rik	0610012C17Rik; PML; PLM; 1110006M24Rik
Mus musculus	MEEBO	ILMN_185842	ILMN_185842	E130014H08RIK	scl16751.14.1_31						E130014H08Rik		ILMN_2430469	003360259	S	5	GTGAAGGATAAGGACTTGAATACTCCCTTACACCTGGCTATCAGTAAAGT										
Mus musculus	RefSeq	ILMN_216529	ILMN_216529	IRAK4	NM_029926.4	NM_029926.4		266632	142387891	NM_029926.4	Irak4	NP_084202.2	ILMN_1226783	001440020	S	1154	GAATCGTGGGCACAACGGCTTACATGGCACCCGAAGCTTTGCGGGGAGAA	15	+	94391975-94392024	15qE3	Mus musculus interleukin-1 receptor-associated kinase 4 (Irak4), mRNA.		The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IPI]	NY-REN-64; 9330209D03Rik; 8430405M07Rik; IRAK-4	NY-REN-64; 9330209D03Rik; 8430405M07Rik; IRAK-4
Mus musculus	RefSeq	ILMN_216529	ILMN_216529	IRAK4	NM_029926.4	NM_029926.4		266632	142387891	NM_029926.4	Irak4	NP_084202.2	ILMN_2672136	005220452	S	1742	GGGCTCATGTTCCACAGCAACATCACCAAACTATAGTGAACTTAAGATTC	15	+	94397725-94397774	15qE3	Mus musculus interleukin-1 receptor-associated kinase 4 (Irak4), mRNA.		The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IPI]	NY-REN-64; 9330209D03Rik; 8430405M07Rik; IRAK-4	NY-REN-64; 9330209D03Rik; 8430405M07Rik; IRAK-4
Mus musculus	RefSeq	ILMN_200701	ILMN_200701	LOC384496	XM_357673.1	XM_357673.1			38085292	XM_357673.1	LOC384496		ILMN_1240388	000870315	S	171	CCAAACCAATGACACTGAGAAACTGTCAGCCTGTCTCCATCCTCTGACTC										
Mus musculus	RefSeq	ILMN_223275	ILMN_253870	AMTN	XM_904684.2	XM_904684.2		71421	94375133	XM_904684.2	Amtn	XP_909777.1	ILMN_2761755	006580528	S	642	ATGACTATGAGATGAGCACCCCTGCAGGCCTGCGAAGGGCCACACACACC				5qE1	PREDICTED: Mus musculus amelotin (Amtn), mRNA.	A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IMP]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [pmid 16304441] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216597	ILMN_216597	MDS1	NM_021442.2	NM_021442.2		17251	118130468	NM_021442.2	Mds1	NP_067417.1	ILMN_1228051	000510747	S	720	GGAGGTCATGGAGCTGTGAGAGAGCTTTCCCTTTATAATATTTCAGCTGG	3	-	30135796-30135845	3qA3	Mus musculus myelodysplasia syndrome 1 homolog (human) (Mds1), mRNA.				Mds; ZNFPR1B1; Prdm3; MDS1-EVI1	Mds; ZNFPR1B1; Prdm3; MDS1-EVI1
Mus musculus	RefSeq	ILMN_200105	ILMN_200105	LOC384199	XM_357482.1	XM_357482.1			38080393	XM_357482.1	LOC384199		ILMN_1215566	002570711	S	845	CAAGAGTCACCGAATTCAAGTACTTGATGACACCCTTGAAGACCCTCTCC										
Mus musculus	RefSeq	ILMN_214234	ILMN_214234	ALDH3B1	NM_026316.2	NM_026316.2		67689	34328287	NM_026316.2	Aldh3b1	NP_080592.2	ILMN_2953515	007050470	S	1437	TTTTGGGGTACAGGAGCCTGCCTGGGGCACAGCTTCAGAGAAGTGGCCTG	19	-	3913836-3913885	19qA	Mus musculus aldehyde dehydrogenase 3 family, member B1 (Aldh3b1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]	ALDH7; ALDH4; 1700001N19Rik	ALDH7; ALDH4; 1700001N19Rik
Mus musculus	RefSeq	ILMN_214234	ILMN_214234	ALDH3B1	NM_026316.2	NM_026316.2		67689	34328287	NM_026316.2	Aldh3b1	NP_080592.2	ILMN_2645793	005720136	S	1640	CACTTCTGAACTACCCACCCTCTCGTGGATAGTGTTGCAAGGGAGCAGTG	19	-	3913633-3913682	19qA	Mus musculus aldehyde dehydrogenase 3 family, member B1 (Aldh3b1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]	ALDH7; ALDH4; 1700001N19Rik	ALDH7; ALDH4; 1700001N19Rik
Mus musculus	RefSeq	ILMN_214234	ILMN_214234	ALDH3B1	NM_026316.2	NM_026316.2		67689	34328287	NM_026316.2	Aldh3b1	NP_080592.2	ILMN_2953513	006400669	S	1579	AGGCTGAGGGTAGGAAGGCAGGAAGGGATGCAGTGACCATAGAATCTTCG	19	-	3913694-3913743	19qA	Mus musculus aldehyde dehydrogenase 3 family, member B1 (Aldh3b1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]	ALDH7; ALDH4; 1700001N19Rik	ALDH7; ALDH4; 1700001N19Rik
Mus musculus	MEEBO	ILMN_184842	ILMN_184842	MRPS10	scl064657.6_146				34147048	NM_183086	Mrps10		ILMN_2769630	006400372	S	860	GCTGTACCTGTTCTCTATAGCAGAGGATGCTTGTGTCCCGATATGAACAA						The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]		
Mus musculus	RefSeq	ILMN_255534	ILMN_255534	ZDHHC12	NM_001037762.1	NM_001037762.1		66220	83649750	NM_001037762.1	Zdhhc12	NP_001032851.1	ILMN_3148355	004180348	A	1027	GTTGGGGGAGGGGTGTTAAAAGAGAACCTAGACACTACACAACCCCTGGC	2	-	29946539-29946588	2qB	Mus musculus zinc finger, DHHC domain containing 12 (Zdhhc12), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1190004A01Rik	1190004A01Rik
Mus musculus	RefSeq	ILMN_220889	ILMN_247461	6130401L20RIK	XM_908408.3	XM_908408.3		75740	149250922	XM_908408.3	6130401L20Rik	XP_913501.2	ILMN_2728202	004280598	S	2397	CTATCGACTGCCTGTTCTCTTGCTTGAATCCAAGGCCCATGTAGGCAGTA				3qA3	PREDICTED: Mus musculus RIKEN cDNA 6130401L20 gene, transcript variant 5 (6130401L20Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213576	ILMN_213576	ATOH8	NM_153778.3	NM_153778.3		71093	118130066	NM_153778.3	Atoh8	NP_722473.1	ILMN_2638548	003440445	S	2127	GGTCAGGTTCAGGCTAACACTTAAATTAGCACTCTGCTGGAGAGCAGCTG	6	-	72156349-72156398	6qC1	Mus musculus atonal homolog 8 (Drosophila) (Atoh8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	okadin; Hath6; 4933425C05Rik; Math6	okadin; Hath6; 4933425C05Rik; Math6
Mus musculus	RefSeq	ILMN_213514	ILMN_323511	LOC100045404	XR_031643.1	XR_031643.1		100045404	149251686	XR_031643.1	LOC100045404		ILMN_2637835	003310369	S	3163	CCAATGTTGGTTACAGAGATGAAAAACATTAAATAGTTATCTTTATTATT					PREDICTED: Mus musculus similar to testicular protein (LOC100045404), misc RNA.					
Mus musculus	RefSeq	ILMN_220543	ILMN_220543	POLR1B	NM_009086.1	NM_009086.1		20017	6677788	NM_009086.1	Polr1b	NP_033112.1	ILMN_2723483	006020129	S	3499	AGGAGGTGTCCTGTATAACACAAGTGAGGGTATTATGGGCTCACTCTGGG	2	+	128951874-128951923	2qF1	Mus musculus polymerase (RNA) I polypeptide B (Polr1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	D630020H17Rik; 128kDa; RPA2; RPA135; RPA116	D630020H17Rik; 128kDa; RPA2; RPA135; RPA116
Mus musculus	RefSeq	ILMN_197057	ILMN_197057	LOC380781	XM_127137.3	XM_127137.3			38073718	XM_127137.3	LOC380781		ILMN_1249549	004670296	S	1391	GTAGGTGCCACTCACAATCCACTGCAGGCACAAAGCATGCCCAGCCTCAA										
Mus musculus	MEEBO	ILMN_195201	ILMN_195201	1110046J11RIK	scl1329.1.1_99						1110046J11Rik		ILMN_2513451	002760528	S	8	CTCCCGCTCCTGCAGTGTGAGTCTCCAGAGCTATCGAAGGCTTTCAGAAC										
Mus musculus	Riken	ILMN_207448	ILMN_207448	MAPK8	ri|D730034N23|PX00673P14|AK085745|1626					AK085745	Mapk8		ILMN_2587676	002750672	S	1155	CTGGGAATTGAACTCAGGACCACTAACCACTGAGCCATCTCTGCAGCCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of introducing a phosphate group into a JUN protein [goid 7258] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IMP]; The process of introducing a phosphate group into a JUN protein [goid 7258] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]		
Mus musculus	RefSeq	ILMN_202716	ILMN_244182	MOBP	NM_001039365.2	NM_001039365.2		17433	141802901	NM_001039365.2	Mobp	NP_001034454.1	ILMN_1240997	000290113	S	528	TCCGACCACCACCAGCCAAGCAGAAGCCCCCTCAGAAGTCTAAGCAGCCA	9	+	120076934-120076983	9qF4	Mus musculus myelin-associated oligodendrocytic basic protein (Mobp), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IDA]	MOBP155; R74645; MOBP69; AI839848; MOBP81; MOBP73; AI835053; MOBP170	MOBP155; R74645; MOBP69; AI839848; MOBP81; MOBP73; AI835053; MOBP170
Mus musculus	MEEBO	ILMN_216610	ILMN_216610	RAB3A	scl019339.5_272	NM_009001.2			31560641	NM_009001.2	Rab3a		ILMN_2673188	003370079	S	1290	AACACTACACACAGTCAATAAAGCGAATGGACCTTGCTGAGTCTGCTGGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus [goid 51602] [evidence IMP]; The series of events required for an organism to receive a touch stimulus, convert it to a molecular signal, and recognize and characterize the signal. The perception of touch in animals is mediated by mechanoreceptors in the skin and mucous membranes and is the sense by which contact with objects gives evidence as to certain of their qualities. Different types of touch can be perceived (for example, light, coarse, pressure and tickling) and the stimulus may be external or internal (e.g. the feeling of a full stomach) [goid 50975] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane [goid 31630] [evidence IMP]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IMP]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence IMP]; The process by which a neuronal cell maintains the organization and the arrangement of proteins at the active zone to ensure the fusion and dock of vesicles and the release of neurotransmitters [goid 48790] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; A organ system process carried out by any of the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange [goid 3016] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199371	ILMN_199371	MTRF1	NM_145960.2	NM_145960.2		211253	31981856	NM_145960.2	Mtrf1	NP_666072.2	ILMN_2646556	004200280	S	549	GAGTTGGTCCAGGGGCTGCTGTCATCAAGGCACAAGGAAGCTTTGGAAAC	14	+	78135752-78135801	14qD3	Mus musculus mitochondrial translational release factor 1 (Mtrf1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code) [goid 6415] [evidence IEA]	Involved in catalyzing the release of a nascent polypeptide chain from a ribosome [goid 3747] [evidence IEA]; A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site [goid 16149] [evidence IEA]	MGC19099; A830062K05Rik	MGC19099; A830062K05Rik
Mus musculus	RefSeq	ILMN_199371	ILMN_199371	MTRF1	NM_145960.2	NM_145960.2		211253	31981856	NM_145960.2	Mtrf1	NP_666072.2	ILMN_2955322	004040286	S	1348	CGTGAGGCTTGTCCACATTCCCACGGGACTGGTAGTAGAGTGCCAACAAG	14	+	78147235-78147259:78150033-78150057	14qD3	Mus musculus mitochondrial translational release factor 1 (Mtrf1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code) [goid 6415] [evidence IEA]	Involved in catalyzing the release of a nascent polypeptide chain from a ribosome [goid 3747] [evidence IEA]; A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site [goid 16149] [evidence IEA]	MGC19099; A830062K05Rik	MGC19099; A830062K05Rik
Mus musculus	RefSeq	ILMN_223591	ILMN_223591	PCDHB12	NM_053137.2	NM_053137.2		93883	148613869	NM_053137.2	Pcdhb12	NP_444367.1	ILMN_1216692	004570474	S	2487	CCGACCCAGGCTGCTGCTGAAGAAAGAGAAAATGCTGTTGTGCGCAATAG				18qB3	Mus musculus protocadherin beta 12 (Pcdhb12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbL; Pcdhb5F	PcdhbL; Pcdhb5F
Mus musculus	RefSeq	ILMN_185984	ILMN_185984	ZMYND10	NM_053253.3	NM_053253.3		114602	141803032	NM_053253.3	Zmynd10	NP_444483.2	ILMN_1252284	007510273	S	1415	GGGAGAAGCACGGAAAGACATGTGTTCTAGCAGCCCAAGGTGACAGAGCC	9	+	107453312-107453361	9qF1	Mus musculus zinc finger, MYND domain containing 10 (Zmynd10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Blu	Blu
Mus musculus	Riken	ILMN_207091	ILMN_207091	AB041568	ri|F830033L24|PL00007A19|AK089856|4767					AK089856	AB041568		ILMN_1254148	000620315	S	4374	CCCGTGTACAGCTGATAACTGTGTCCCGTGTACAGCTGATAACTGTGTCC										
Mus musculus	Riken	ILMN_205414	ILMN_205414	MCPR	ri|E130013D04|PX00208J23|AK053383|3008					AK053383	Mcpr		ILMN_1239665	005860672	S	2690	GAGTCAGGAAGATTGCTTGAGACTAGCCCTTTGGGGGCAGCCTGGGCAAC										
Mus musculus	MEEBO	ILMN_194998	ILMN_194998	BCL7C	scl30639.8_248				34328165	NM_009746	Bcl7c		ILMN_1253916	004810369	S	1	CAAGTCACGTCTGCGAATGATGTGGACCATGCGTTGTGCTTTCTTGCTCG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218370	ILMN_218370	DNAIC1	NM_175138.3	NM_175138.3		68922	142383967	NM_175138.3	Dnaic1	NP_780347.1	ILMN_2744879	001740121	S	2370	CCAATCCCAGTATTTGCTTTTCTCATTCTGGCTCTTAAGGGCATGCCACC	4	+	41585070-41585119	4qA5	Mus musculus dynein, axonemal, intermediate chain 1 (Dnaic1), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	BB124644; 1110066F04Rik	BB124644; 1110066F04Rik
Mus musculus	RefSeq	ILMN_218370	ILMN_218370	DNAIC1	NM_175138.3	NM_175138.3		68922	142383967	NM_175138.3	Dnaic1	NP_780347.1	ILMN_2694884	001990438	S	2107	GTGCAGTTCAATCCCATCCACCCCATCATAATCGTGGGCGACGACCGTGG	4	+	41582082-41582131	4qA5	Mus musculus dynein, axonemal, intermediate chain 1 (Dnaic1), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	BB124644; 1110066F04Rik	BB124644; 1110066F04Rik
Mus musculus	Riken	ILMN_204413	ILMN_204413	HEBP2	ri|A230013I17|PX00126P15|AK038452|2085					AK038452	Hebp2		ILMN_1254381	006560379	S	1872	TCTCCCACAGGTCCATTAGGGAAGGCTGTAGTGGGGAGCGTCTGGGGTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]				
Mus musculus	RefSeq	ILMN_198083	ILMN_198083	LOC224532	XM_128427.3	XM_128427.3			38081730	XM_128427.3	LOC224532		ILMN_2530434	001710327	S	653	TACTGCCTCCGTACGATGATGCTACTGCTGTGCCTAGCACTGCCAAGTAG										
Mus musculus	RefSeq	ILMN_213939	ILMN_213939	LYSMD3	NM_030257.1	NM_030257.1		80289	13385021	NM_030257.1	Lysmd3	NP_084533.1	ILMN_2642489	005290070	S	2919	CTTGGAATTGTGATCGAAGGGTCTGATCACTTATATTTAAAGGAGTAGGT	13	+	81810682-81810731	13qC3	Mus musculus LysM, putative peptidoglycan-binding, domain containing 3 (Lysmd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		MGC7041; 1110030H10Rik; BC003322	MGC7041; 1110030H10Rik; BC003322
Mus musculus	RefSeq	ILMN_200626	ILMN_245904	GM1070	NM_001033462.2	NM_001033462.2		381785	142360133	NM_001033462.2	Gm1070	NP_001028634.1	ILMN_2539428	000540064	S	634	CCACCAAAAGCAGAAGGGGCCGGAGGAGAGGGATTTGTGGGACGAAGCTA	6	+	71250634-71250683	6qC1	Mus musculus gene model 1070, (NCBI) (Gm1070), mRNA.					
Mus musculus	RefSeq	ILMN_236373	ILMN_236373	CSTA	NM_001033239.1	NM_001033239.1		209294	84370295	NM_001033239.1	Csta	NP_001028411.1	ILMN_2945358	000670201	S	2607	GGACTGGGTCTAAGCCTTGTATTCTTAAATGAGCTGCATAGGCACTGTGC	16	-	36039321-36039370	16qB3	Mus musculus cystatin A (Csta), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213176	ILMN_213176	CTNNA1	NM_009818.1	NM_009818.1		12385	6753293	NM_009818.1	Ctnna1	NP_033948.1	ILMN_2780205	000070753	S	3452	CACCATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTTTGGGCCAG	18	+	35414205-35414254	18qB1	Mus musculus catenin (cadherin associated protein), alpha 1 (Ctnna1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; Cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells [goid 5915] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IGI]; The formation of an apical junction, a functional unit located near the cell apex at the points of contact between epithelial cells composed of the tight junction, the zonula adherens junction and the desmosomes, by the aggregation, arrangement and bonding together of its constituents [goid 43297] [evidence IMP]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IGI]	Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2010010M04Rik; AA517462; AI988031; Catna1	2010010M04Rik; AA517462; AI988031; Catna1
Mus musculus	RefSeq	ILMN_220537	ILMN_220537	DAG1	NM_010017.1	NM_010017.1		13138	33859531	NM_010017.1	Dag1	NP_034147.1	ILMN_2853957	002760382	S	4306	GGCCGTGGGCCTGTGGCTGGGGAGGAGTGCCAGCAATAGTTCATAGTAAA	9	-	108064118-108064167	9qF2	Mus musculus dystroglycan 1 (Dag1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; A protein complex that includes alpha- and beta-dystroglycan, which are alternative products of the same gene; the laminin-binding component of the dystrophin-associated glycoprotein complex, providing a link between the subsarcolemmal cytoskeleton (in muscle cells) and the extracellular matrix. Alpha-dystroglycan is an extracellular protein binding to alpha-laminin and to beta-dystroglycan; beta-dystroglycan is a transmembrane protein which binds alpha-dystroglycan and dystrophin [goid 16011] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Dp71; DG; D9Wsu13e; Dp427	Dp71; DG; D9Wsu13e; Dp427
Mus musculus	RefSeq	ILMN_189924	ILMN_239702	WHSC2	NM_011914.2	NM_011914.2		24116	118130005	NM_011914.2	Whsc2	NP_036044.1	ILMN_2474887	005810008	S	2014	GGGTGTGAGGGGGGCTATGACCAGCCTTGATGCCACTATTTACCAGGGAT	5	-	34240926-34240975	5qB2	Mus musculus Wolf-Hirschhorn syndrome candidate 2 (human) (Whsc2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Whsc2h; NELFA	Whsc2h; NELFA
Mus musculus	RefSeq	ILMN_190262	ILMN_259676	TBC1D8	NM_018775.3	NM_018775.3		54610	142379940	NM_018775.3	Tbc1d8	NP_061245.2	ILMN_1255779	001940162	S	3982	TGCCCTTACAAAAACATGTTCAAACCATGCCTTTAATGTTTGTCCTCAAG	1	-	39428736-39428785	1qB	Mus musculus TBC1 domain family, member 8 (Tbc1d8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AD3; VRP; HBLP1	AD3; VRP; HBLP1
Mus musculus	MEEBO	ILMN_195304	ILMN_195304	CXADR	scl48937.1.1_21				6857774	NM_009988	Cxadr		ILMN_2514377	005420047	S	14	AGAATAGAGGCCATCAGTTGGGCTTGTTGTTGATTCAGACACTAAGAAGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle fiber over time, from its formation to the mature structure [goid 48739] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217851	ILMN_217851	PRPF38B	NM_025845.2	NM_025845.2		66921	118130261	NM_025845.2	Prpf38b	NP_080121.1	ILMN_2929553	005090747	S	2625	GTGTGTAAGCCTGGCGTTGTAGCAGCCCTATACTAAGGAGTGATTGGGAG	3	-	108706053-108706102	3qF3	Mus musculus PRP38 pre-mRNA processing factor 38 (yeast) domain containing B (Prpf38b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		AU018955; 1110021E09Rik	AU018955; 1110021E09Rik
Mus musculus	RefSeq	ILMN_208654	ILMN_228674	FN1	NM_010233.1	NM_010233.1		14268	46849811	NM_010233.1	Fn1	NP_034363.1	ILMN_2646618	000730427	S	5356	GATCGCCCTAAAGGACTGGCATTCACTGATGTGGATGTCGATTCCATCAA	1	-	71650448-71650497	1qC3	Mus musculus fibronectin 1 (Fn1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IDA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence IDA]	E330027I09; MGC117493; Fn; Fn-1	E330027I09; MGC117493; Fn; Fn-1
Mus musculus	RefSeq	ILMN_208654	ILMN_228674	FN1	NM_010233.1	NM_010233.1		14268	46849811	NM_010233.1	Fn1	NP_034363.1	ILMN_2595714	001940743	S	7050	CCTGAACCAGCCTACAGATGACTCATGCTTTGACCCTTACACGGTTTCCC	1	-	71639749-71639798	1qC3	Mus musculus fibronectin 1 (Fn1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IDA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence IDA]	E330027I09; MGC117493; Fn; Fn-1	E330027I09; MGC117493; Fn; Fn-1
Mus musculus	RefSeq	ILMN_208654	ILMN_228674	FN1	NM_010233.1	NM_010233.1		14268	46849811	NM_010233.1	Fn1	NP_034363.1	ILMN_1260125	001450070	S	4028	CAAGCATCGGCCTGAGGTGGACCCCGCTAAACTCTTCCACCATTATCGGG	1	-	71660514-71660563	1qC3	Mus musculus fibronectin 1 (Fn1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IDA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence IDA]	E330027I09; MGC117493; Fn; Fn-1	E330027I09; MGC117493; Fn; Fn-1
Mus musculus	RefSeq	ILMN_208654	ILMN_228674	FN1	NM_010233.1	NM_010233.1		14268	46849811	NM_010233.1	Fn1	NP_034363.1	ILMN_2588227	006900192	S	7355	GGAAGACCTACCATGTAGGAGAACAGTGGCAGAAAGAATATCTCGGAGCC	1	-	71636704-71636753	1qC3	Mus musculus fibronectin 1 (Fn1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IDA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence IDA]	E330027I09; MGC117493; Fn; Fn-1	E330027I09; MGC117493; Fn; Fn-1
Mus musculus	RefSeq	ILMN_186395	ILMN_253278	LOC675565	XR_004802.1	XR_004802.1		675565	94370378	XR_004802.1	LOC675565		ILMN_1253438	000620451	S	712	ATTCAGTTTTCTTTCTCAGCTCGCTTGCACAGATCCCTGGCTTCATCTGC					PREDICTED: Mus musculus hypothetical protein LOC675565 (LOC675565), mRNA.					
Mus musculus	RefSeq	ILMN_252554	ILMN_252554	OLFR967	NM_001011826.1	NM_001011826.1		258086	58801415	NM_001011826.1	Olfr967	NP_001011826.1	ILMN_3161968	000380577	S	450	CATGGGTTTTATTGGTGCCACAGCTCACACAGTGTGCATGCTAAGAGTCC	9	+	39558422-39558471	9qA5.1	Mus musculus olfactory receptor 967 (Olfr967), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-30P	MOR171-30P
Mus musculus	RefSeq	ILMN_208920	ILMN_208920	MPP5	NM_019579.1	NM_019579.1		56217	9625022	NM_019579.1	Mpp5	NP_062525.1	ILMN_2594593	000840685	S	1322	GACATTTGTTCTGATTCCTAGTCAACAGATCAAGCCCCCTCCTGCCAAAG	12	+	79921823-79921872	12qC3	Mus musculus membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) (Mpp5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + GMP = ADP + GDP [goid 4385] [evidence ISS]	AI644496; 3830420B02Rik; Pals1; AI255216	AI644496; 3830420B02Rik; Pals1; AI255216
Mus musculus	RefSeq	ILMN_208920	ILMN_208920	MPP5	NM_019579.1	NM_019579.1		56217	9625022	NM_019579.1	Mpp5	NP_062525.1	ILMN_2590811	004830086	S	2658	GCAATAGTCCATTGTCTCACATAGATATGAATATTAACATTATTTAACAT	12	+	79938921-79938970	12qC3	Mus musculus membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) (Mpp5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + GMP = ADP + GDP [goid 4385] [evidence ISS]	AI644496; 3830420B02Rik; Pals1; AI255216	AI644496; 3830420B02Rik; Pals1; AI255216
Mus musculus	RefSeq	ILMN_243090	ILMN_243090	GPR161	NM_001081126.1	NM_001081126.1		240888	124487462	NM_001081126.1	Gpr161	NP_001074595.1	ILMN_3096982	000050348	A	1264	GGACCTCCAGGCTCTTCAGCATTTCCAACAGGATCACAGACTTGGGTCTG	1	+	167241086-167241124:167247371-167247381	1qH2.3	Mus musculus G protein-coupled receptor 161 (Gpr161), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gm208; Gm208Gpr	Gm208; Gm208Gpr
Mus musculus	RefSeq	ILMN_193020	ILMN_226453	1110051M20RIK	NM_175123.4	NM_175123.4		228356	146198814	NM_175123.4	1110051M20Rik	NP_780332.1	ILMN_2711312	001170239	S	1733	GTTGTGAATTTGGCCCGAGTGTTTGGTCAGGTTCTCCACCTATGAGACCC				2qE1	Mus musculus RIKEN cDNA 1110051M20 gene (1110051M20Rik), transcript variant 2, mRNA.				AI586322; MGC4707; RP23-42N14.3; MGC40841	AI586322; MGC4707; RP23-42N14.3; MGC40841
Mus musculus	RefSeq	ILMN_212772	ILMN_212772	SERPINB3B	NM_198680.2	NM_198680.2		383548	142354324	NM_198680.2	Serpinb3b	NP_941373.1	ILMN_2669321	001090286	S	1536	AAACTGATTAATATAAGCATCTATATTGTTTTACGAAATATCTGGAAATT	1	-	109050584-109050633	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3B (Serpinb3b), mRNA.			 [goid 4869] [evidence IDA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IDA]	Scca2-rs; MGC118408; Scca2-rs1	Scca2-rs; MGC118408; Scca2-rs1
Mus musculus	RefSeq	ILMN_212772	ILMN_212772	SERPINB3B	NM_198680.2	NM_198680.2		383548	142354324	NM_198680.2	Serpinb3b	NP_941373.1	ILMN_2630163	006060703	S	1087	GCTGCCACAGGAGTGGAAGTCAGTGTAAGATCAGCACAGATAGCAGAAGA	1	-	109051033-109051082	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3B (Serpinb3b), mRNA.			 [goid 4869] [evidence IDA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IDA]	Scca2-rs; MGC118408; Scca2-rs1	Scca2-rs; MGC118408; Scca2-rs1
Mus musculus	RefSeq	ILMN_220062	ILMN_220062	OLFR1453	NM_146700.1	NM_146700.1		258695	22129436	NM_146700.1	Olfr1453	NP_666911.1	ILMN_2717108	000060735	S	678	CCACTCATCTGCAGGATATCACAAAGCTGTTTCCACATGTGCCTCGCACT	19	-	13102090-13102139	19qA	Mus musculus olfactory receptor 1453 (Olfr1453), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-6	MOR202-6
Mus musculus	RefSeq	ILMN_200506	ILMN_200506	LOC383278	XM_356961.1	XM_356961.1			38082959	XM_356961.1	LOC383278		ILMN_1229933	006620092	S	413	TCATGGGTGTCGGCATCAACCTGCTTGTGAAGGAGAGCCTTTGGATGGTG										
Mus musculus	Riken	ILMN_205997	ILMN_205997	CACNA2D1	ri|D830029A14|PX00199P04|AK052898|1271					AK052898	Cacna2d1		ILMN_1215110	007550632	S	1178	GAGGCTACAGTTGTATCTGAAACCCAGTGCTCAAAGTCTGGTTGTCCAAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_193712	ILMN_193712	POP4	scl31449.7_0				27228966	NM_025390	Pop4		ILMN_2499707	006510474	S	20	TTCATATGACAGAAAAATAGAATGCTTACTCCCAGAACCACCTACAGTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex that catalyzes cleavage of the leader sequence of precursor tRNAs (pre-tRNAs), generating the mature 5' end of tRNAs [goid 30677] [evidence IEA]; A ribonucleoprotein complex that cleaves the rRNA precursor as part of rRNA transcript processing. It also has other roles: In S. cerevisiae it is involved in cell cycle-regulated degradation of daughter cell-specific mRNAs, while in mammalian cells it also enters the mitochondria and processes RNAs to create RNA primers for DNA replication [goid 172] [evidence IEA]; A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197064	ILMN_197064	LOC380784	XM_354695.1	XM_354695.1			38073738	XM_354695.1	LOC380784		ILMN_1233662	002810438	S	1395	CAGTTACCCATGCTCAGCCGTGGCCCAGAGTGTCCAACGGGAAATCTCAG										
Mus musculus	RefSeq	ILMN_213580	ILMN_213580	MCM8	NM_025676.3	NM_025676.3		66634	118130297	NM_025676.3	Mcm8	NP_079952.2	ILMN_2638598	006350551	S	2632	ACAAAACTGAAAATAAAAGTTCTGAAAAATGACACAACTCCTATAACAGA	2	+	132669362-132669411	2qF2	Mus musculus minichromosome maintenance deficient 8 (S. cerevisiae) (Mcm8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	5730432L01Rik	5730432L01Rik
Mus musculus	RefSeq	ILMN_220208	ILMN_220208	D14ERTD231E	NM_153414.2	NM_153414.2		210925	31981979	NM_153414.2	D14Ertd231e	NP_700463.2	ILMN_2990144	002190347	S	2224	TGTGACAATGACGAGACACTGAGGGTCCGACTGCGGGACCTTGTCCTCAG	14	+	63993492-63993541	14qD1	Mus musculus DNA segment, Chr 14, ERATO Doi 231, expressed (D14Ertd231e), mRNA.				BC028953	BC028953
Mus musculus	RefSeq	ILMN_197712	ILMN_231984	LOC211832	XR_003695.1	XR_003695.1		211832	94399607	XR_003695.1	LOC211832		ILMN_1229896	001500450	S	625	GTTGCTATGGGAACCACCTTCTGCGATGGCCTCCACTGTGGGAACAATGG				15qD1	PREDICTED: Mus musculus similar to glycerol-3-phosphate dehydrogenase 1-like (LOC211832), mRNA.					
Mus musculus	RefSeq	ILMN_214039	ILMN_214039	SVS2	NM_017390.3	NM_017390.3		53878	141802212	NM_017390.3	Svs2	NP_059086.2	ILMN_1254247	006580441	S	904	GCGGAAACAATTTAGTGACGATGACCTCTCAGTACAACAGAAGTCTACCC	2	-	164062790-164062839	2qH3	Mus musculus seminal vesicle secretory protein 2 (Svs2), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IDA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence IDA]	Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [evidence IDA]	MGC130221; BB115391	MGC130221; BB115391
Mus musculus	RefSeq	ILMN_208957	ILMN_259761	CST12	XM_918155.3	XM_918155.3		69362	149249775	XM_918155.3	Cst12	XP_923248.2	ILMN_1260424	007050324	S	389	AGTTCACCATCTTGAACAGCACCTGTGTGCAGACTTAAGTGGGGCAGAGG				2qG3	PREDICTED: Mus musculus cystatin 12 (Cst12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220050	ILMN_220050	CCDC38	NM_175488.5	NM_175488.5		237465	146198740	NM_175488.5	Ccdc38	NP_780697.2	ILMN_2716995	002630521	S	3444	TAGTATAGCTGCACGGGAGGGAAGAGTGCAGCATGCCTACTCGGTGAGGA				10qC2	Mus musculus coiled-coil domain containing 38 (Ccdc38), mRNA.				4933417K05Rik	4933417K05Rik
Mus musculus	MEEBO	ILMN_184852	ILMN_184852	SEC15L1	scl53165.19_469				28202020	NM_175353	Sec15l1		ILMN_1235861	004830703	S	1	ACGACAGGGTTCAGGTCAACGCTATTCAGAGAAGATCTCAGTGCTGTGGA										
Mus musculus	Riken	ILMN_206303	ILMN_206303	C230011P08RIK	ri|C230011P08|PX00173O10|AK082134|4483					AK082134	C230011P08Rik		ILMN_1258653	004280600	S	4073	TTCTGGACTACGATATGCTGCCTGAGCTGACCGTGCCCGTTGACTTGGCC										
Mus musculus	RefSeq	ILMN_222839	ILMN_222839	BC037034	NM_153161.1	NM_153161.1		231807	23346608	NM_153161.1	BC037034	NP_694801.1	ILMN_1257019	006450059	S	1790	CAGGGGTTGGATGGCCTCTTTCTGCCCCTCATGTTTACGTTGGCAGCCTG	5	-	138700984-138701033	5qG2	Mus musculus cDNA sequence BC037034 (BC037034), mRNA.				MGC47434	MGC47434
Mus musculus	Riken	ILMN_203828	ILMN_203828	4933406E20RIK	ri|A230076F11|PX00129J11|AK038927|1297					AK038927	4933406E20Rik		ILMN_1252634	005220743	S	1115	GGTTGACATACACGGGGCCTGTTTCCATTCTGCCTTCAGCAGGTCTGGGG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194247	ILMN_194247	MT-ATP6	scl0017705.1_119						mt-Atp6		ILMN_2504686	002850037	S	8	CCTCCAAGCTTCAGAATACTTTGAAACATCATTCTCCATTTCAGATGGTA						All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211916	ILMN_211916	AUTS2	NM_177047.3	NM_177047.3		319974	124486585	NM_177047.3	Auts2	NP_796021.2	ILMN_3052726	006620332	I	5377	GTCCTGGCTCATGACACGGAGGACACACTTCCTCGTTCCACAGTATGATT	5	-	131914184-131914233	5qG2	Mus musculus autism susceptibility candidate 2 (Auts2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A730011F23Rik; D830032G16Rik; 2700063G02Rik	A730011F23Rik; D830032G16Rik; 2700063G02Rik
Mus musculus	RefSeq	ILMN_211916	ILMN_211916	AUTS2	NM_177047.3	NM_177047.3		319974	124486585	NM_177047.3	Auts2	NP_796021.2	ILMN_1216915	001710672	S	977	GAGAATGACCGCAATCTCTGCCAGCACCTTGGGAAGAGAAAGAAGATGCC	5	-	132734809-132734858	5qG2	Mus musculus autism susceptibility candidate 2 (Auts2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A730011F23Rik; D830032G16Rik; 2700063G02Rik	A730011F23Rik; D830032G16Rik; 2700063G02Rik
Mus musculus	RefSeq	ILMN_196468	ILMN_211916	AUTS2	NM_177047.3	NM_177047.3		319974	124486585	NM_177047.3	Auts2	NP_796021.2	ILMN_1250157	002340097	S	4246	GTCGGCTGAAATCCGAGAGAGGCCACCGTCCCACACACTGAAGGACATTG	5	-	131915315-131915364	5qG2	Mus musculus autism susceptibility candidate 2 (Auts2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A730011F23Rik; D830032G16Rik; 2700063G02Rik	A730011F23Rik; D830032G16Rik; 2700063G02Rik
Mus musculus	Riken	ILMN_202343	ILMN_202343	TPTF-PENDING	ri|4930401A13|PX00029G10|AK015028|1208					AK015028	Tptf-pending		ILMN_1237746	003170474	S	884	ACGCCATAATCTTAGGTGGAGGCAATGAGAGGCAAGCGCTGGGGAGACTG										
Mus musculus	RefSeq	ILMN_188046	ILMN_234117	PPP2R5C	NM_012023.2	NM_012023.2		26931	125346019	NM_012023.2	Ppp2r5c	NP_036153.2	ILMN_2758061	006900400	S	1507	CCTCAGTTTGAAGATGTGCAGATGCTGAAAAAGACAGTGAGCGACGAGGC	12	+	111813015-111813064	12qF1	Mus musculus protein phosphatase 2, regulatory subunit B (B56), gamma isoform (Ppp2r5c), transcript variant 1, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence ISO]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0044; D12Bwg0916e; AI060890; 2610043M05Rik; AW545884; 2700063L20Rik	mKIAA0044; D12Bwg0916e; AI060890; 2610043M05Rik; AW545884; 2700063L20Rik
Mus musculus	Riken	ILMN_201997	ILMN_201997	TRRP1	ri|1500004E04|ZX00042E15|AK005144|2064					AK005144	Trrp1		ILMN_1257053	001850333	S	1659	AAGAGCGCTTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGC										
Mus musculus	Riken	ILMN_204424	ILMN_204424	NFATC3	ri|A430032E24|PX00135A06|AK039929|2157					AK039929	Nfatc3		ILMN_1240030	005810168	S	2089	CTGATACCCATAGCCATCACAGGCACCTGCACTCATGTGCATCAACACGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218095	ILMN_218095	GCNT1	NM_010265.2	NM_010265.2		14537	142353328	NM_010265.2	Gcnt1	NP_034395.1	ILMN_1239547	001500707	S	22	CCCAATGAAACCTTGATTTTAATGGGTTTTATAGTCCATAGAAAGTCCAT	19	-	17407676-17407725	19qB	Mus musculus glucosaminyl (N-acetyl) transferase 1, core 2 (Gcnt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R = UDP + beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R [goid 3829] [evidence IEA]	C2 GlcNAcT; IGnT; B130048E03; 5630400D21Rik	C2 GlcNAcT; IGnT; B130048E03; 5630400D21Rik
Mus musculus	Riken	ILMN_205877	ILMN_205877	E330022B15RIK	ri|E330022B15|PX00212K14|AK054393|3971					AK054393	E330022B15Rik		ILMN_1228641	002000343	S	3596	CTTCCTGTGGAGGGGGCCTTAGATCACAGCAGAGAGCAGTAAAGTTGCAT										
Mus musculus	Riken	ILMN_206677	ILMN_206677	5430439D08RIK	ri|5430439D08|PX00314E22|AK077404|3262					AK077404	5430439D08Rik		ILMN_1251789	003310600	S	2485	GCCCAGTTTGTTGGGTTCCACCCTGTTTTCTTGTCCAAGCCAGAAAAGGG										
Mus musculus	RefSeq	ILMN_215855	ILMN_215855	1700001O22RIK	NM_198000.1	NM_198000.1		73598	37574089	NM_198000.1	1700001O22Rik	NP_932117.1	ILMN_2962336	007200619	S	972	TTATCCCAGGGTCCAAGACACTGTGGCCGGCTCCTCATTCTGGACCTGCC	2	-	30651927-30651976	2qB	Mus musculus RIKEN cDNA 1700001O22 gene (1700001O22Rik), mRNA.				4930549G18Rik; 1700113K14Rik	4930549G18Rik; 1700113K14Rik
Mus musculus	RefSeq	ILMN_215855	ILMN_215855	1700001O22RIK	NM_198000.1	NM_198000.1		73598	37574089	NM_198000.1	1700001O22Rik	NP_932117.1	ILMN_2664449	004610500	S	698	CTACCCTGGGGCTCCCAAGAGGTGAACTTGCCAGAGCCAAAAAGGCCCAT	2	-	30656245-30656294	2qB	Mus musculus RIKEN cDNA 1700001O22 gene (1700001O22Rik), mRNA.				4930549G18Rik; 1700113K14Rik	4930549G18Rik; 1700113K14Rik
Mus musculus	RefSeq	ILMN_213997	ILMN_213997	ADCY6	NM_007405.2	NM_007405.2		11512	86604720	NM_007405.2	Adcy6	NP_031431.2	ILMN_2659879	006200017	S	2459	ATAAGGACCTGCGCGGCCCGGATGCTGAACTTAACACCAGCGGATGTCAC	15	-	98427035-98427084	15qF1	Mus musculus adenylate cyclase 6 (Adcy6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS]	mKIAA0422	mKIAA0422
Mus musculus	RefSeq	ILMN_213997	ILMN_213997	ADCY6	NM_007405.2	NM_007405.2		11512	86604720	NM_007405.2	Adcy6	NP_031431.2	ILMN_1249888	004290609	S	5572	AATCTCCATGTACCAATCGGTGGACCACTGGGCGCTTGATTAGCCAAGGC	15	-	98420820-98420869	15qF1	Mus musculus adenylate cyclase 6 (Adcy6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS]	mKIAA0422	mKIAA0422
Mus musculus	RefSeq	ILMN_213997	ILMN_213997	ADCY6	NM_007405.2	NM_007405.2		11512	86604720	NM_007405.2	Adcy6	NP_031431.2	ILMN_2706140	001190762	S	3112	CAATTTCTCGGAGTTCTACGTGGAGCTCGAGGCAAACAACGAGGGCGTGG	15	-	98424805-98424854	15qF1	Mus musculus adenylate cyclase 6 (Adcy6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS]	mKIAA0422	mKIAA0422
Mus musculus	RefSeq	ILMN_230548	ILMN_230548	ZMYND15	NM_001029929.1	NM_001029929.1		574428	71480093	NM_001029929.1	Zmynd15	NP_001025100.1	ILMN_2795491	001820739	S	2528	GCCTTCATCTTCCATTTGGTCTACAAGCCTCCCCAAGGCGGCACAGTCCG	11	+	70282121-70282170	11qB3	Mus musculus zinc finger, MYND-type containing 15 (Zmynd15), mRNA.					
Mus musculus	MEEBO	ILMN_221257	ILMN_221257	9130204K15RIK	scl39859.2.1_8				51828583	XM_488604	9130204K15Rik		ILMN_2733082	001070382	S	490	CGCATCAGAAGCCTGAAGTTCCATTTGTCATCTGTCACGGTGTTTGGAGG										
Mus musculus	RefSeq	ILMN_217655	ILMN_255442	AEBP2	NM_178803.2	NM_178803.2		11569	118130635	NM_178803.2	Aebp2	NP_848918.1	ILMN_1237360	004890296	S	5695	GGAAGAACCCTCTAAGAACAGTAAGACCAATAAAATTGCTGTAAATGGCG	6	+	140603765-140603814	6qG2	Mus musculus AE binding protein 2 (Aebp2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IMP]	B230313N05Rik	B230313N05Rik
Mus musculus	RefSeq	ILMN_202998	ILMN_255442	AEBP2	NM_178803.2	NM_178803.2		11569	118130635	NM_178803.2	Aebp2	NP_848918.1	ILMN_1258253	004200086	S	2886	AAGAGGTAGGCATGGAACAGTCATGGAGCCTGAGGGACGAGGGGGAAGCA	6	+	140600956-140601005	6qG2	Mus musculus AE binding protein 2 (Aebp2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IMP]	B230313N05Rik	B230313N05Rik
Mus musculus	RefSeq	ILMN_255442	ILMN_255442	AEBP2	NM_178803.2	NM_178803.2		11569	118130635	NM_178803.2	Aebp2	NP_848918.1	ILMN_3040064	006620634	I	340	AAGCAACGCCCGCCTCGTCTGAGCTGCCCTCCTTGGGTCATTGGGACATC	6	+	140571523-140571572	6qG2	Mus musculus AE binding protein 2 (Aebp2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IMP]	B230313N05Rik	B230313N05Rik
Mus musculus	RefSeq	ILMN_198206	ILMN_198206	LOC240168	XM_140160.2	XM_140160.2			38082889	XM_140160.2	LOC240168		ILMN_1241599	007200470	S	1665	CCCCTTCCTGGATTCCTTCTGCTTACTATTCATAAATACAGCAGAGTACG										
Mus musculus	RefSeq	ILMN_221910	ILMN_221910	H2-EA	NM_010381.2	NM_010381.2		14968	31982788	NM_010381.2	H2-Ea	NP_034511.2	ILMN_2741935	003450528	S	837	TTGCTGTGACAGCGTCTGAGGCTACCCCTTTCAGTTGTTCATCTCAGCGG	17	-	34480744-34480793	17qB1	Mus musculus histocompatibility 2, class II antigen E alpha (H2-Ea), mRNA.	A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IDA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IGI]		E-alpha-f; H-2Ea; Ia-3; Ia3; AI323765; MGC117888	E-alpha-f; H-2Ea; Ia-3; Ia3; AI323765; MGC117888
Mus musculus	RefSeq	ILMN_218984	ILMN_218984	SLC35A1	NM_011895.2	NM_011895.2		24060	31560518	NM_011895.2	Slc35a1	NP_036025.1	ILMN_2702767	007560327	S	344	GCCCCAAGGAACTGGCGAAGTTGAGTGTGCCATCACTAGTGTATGCTGTG	4	-	34622775-34622824	4qA5	Mus musculus solute carrier family 35 (CMP-sialic acid transporter), member 1 (Slc35a1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]	AI314851; AA408150	AI314851; AA408150
Mus musculus	MEEBO	ILMN_184497	ILMN_184497	2410164B09RIK	scl0076823.1_211						2410164B09Rik		ILMN_2419119	001780491	S	20	ACTCACATCGTGGAACAAGAGGATCAACCTGTGAGTGGTCTTCTGGCTCC										
Mus musculus	MEEBO	ILMN_194608	ILMN_194608	DEPDC1B	scl44412.15.1_35				31341055	NM_178683	Depdc1b		ILMN_1259229	006420039	S	1	CCGTGAATACATCAATCACAAGAAATGGTCTTTTCACCAAATGTACTAAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_206615	ILMN_206615	E230026L19RIK	ri|E230026L19|PX00210N20|AK087624|1112					AK087624	E230026L19Rik		ILMN_2581394	003310221	S	647	AGAGAGCAGCAGGCGCTAGGTGGGAATGTGGCTTTGTGCCTCAGCACTTG										
Mus musculus	RefSeq	ILMN_223461	ILMN_223461	MUC6	NM_181729.1	NM_181729.1		353328	32171191	NM_181729.1	Muc6	NP_859418.1	ILMN_2764391	006650543	S	8445	TACCTACAAGAAGCAACTCTCACTGCCCTGCCCAGATCCCGATGCGCCAG				7qF5	Mus musculus mucin 6, gastric (Muc6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	MEEBO	ILMN_224118	ILMN_224118	BC030396	scl0239463.2_21				33239367	NM_173862	BC030396		ILMN_2775106	003800100	S	741	GGACCAGGGCGGGGTGAAGCTCTTCCAGGAGATGTGTGACAAAGTCCAGA										
Mus musculus	RefSeq	ILMN_228310	ILMN_228310	TAAR3	NM_001008429.1	NM_001008429.1		493809	56606038	NM_001008429.1	Taar3	NP_001008429.1	ILMN_2846059	001260020	S	590	GGGGGACCATACTGTTCACTACCTGCTTCTTCACTCCTGGCTCCATCATG	10	+	23669953-23670002	10qA4	Mus musculus trace amine-associated receptor 3 (Taar3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]		
Mus musculus	RefSeq	ILMN_199004	ILMN_228310	TAAR3	NM_001008429.1	NM_001008429.1		493809	56606038	NM_001008429.1	Taar3	NP_001008429.1	ILMN_1222605	000060228	S	755	GGAAAGCAGCTAAGACCCTGGGCATCGTCATGGGGGTGTTTCTAGCGTGC	10	+	23670118-23670167	10qA4	Mus musculus trace amine-associated receptor 3 (Taar3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]		
Mus musculus	RefSeq	ILMN_201528	ILMN_201528	SIAT7B	NM_009180.2	NM_009180.2			31543706	NM_009180.2	Siat7b		ILMN_1256285	007570398	S	3359	AAGAAAGTTTTAAGAAGTTCCTGGTAGGGCTGGTGAGATGGCTCAGTGGG										
Mus musculus	RefSeq	ILMN_213245	ILMN_213245	SRL	NM_175347.4	NM_175347.4		106393	118129867	NM_175347.4	Srl	NP_780556.2	ILMN_2635122	000990270	S	4671	CTTACAGGATTTGCATTTGGGGGAAGACACCTTACCAGTAGTATCCTCCT	16	-	4480485-4480534	16qA1	Mus musculus sarcalumenin (Srl), mRNA.	A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	9830004M20Rik; AW108387; sar	9830004M20Rik; AW108387; sar
Mus musculus	RefSeq	ILMN_213245	ILMN_213245	SRL	NM_175347.4	NM_175347.4		106393	118129867	NM_175347.4	Srl	NP_780556.2	ILMN_2924619	003400414	S	2628	CCCCAGCCTTCTGGGTAGCATTGGGCTTGGGAAGAATCCAGGTGCTCCTA	16	-	4482528-4482577	16qA1	Mus musculus sarcalumenin (Srl), mRNA.	A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	9830004M20Rik; AW108387; sar	9830004M20Rik; AW108387; sar
Mus musculus	RefSeq	ILMN_213803	ILMN_237814	1700012C15RIK	XM_910878.2	XM_910878.2		76390	94390522	XM_910878.2	1700012C15Rik	XP_915971.2	ILMN_2640970	007050152	S	618	GCTTCTTTAGGAAAATTTTTACAACAACTTTTGAAATGCAACTCTGTACA				11qB4	PREDICTED: Mus musculus RIKEN cDNA 1700012C15 gene (1700012C15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199044	ILMN_199044	LOC216177	XM_125803.2	XM_125803.2			38090583	XM_125803.2	LOC216177		ILMN_1224392	004150228	S	540	GCAGGAGTTTGGAAGCCTGCAACATCACAAGGAATGTGAGCACTCCACCA										
Mus musculus	RefSeq	ILMN_221111	ILMN_221111	CC2D1B	NM_177045.2	NM_177045.2		319965	31342676	NM_177045.2	Cc2d1b	NP_796019.1	ILMN_2731197	002000370	S	2921	TTGCGTACCGCTTAACCCAGCCCCCATTTGCACCATTTCTGGATGTGCCT	4	+	108131689-108131738	4qC7	Mus musculus coiled-coil and C2 domain containing 1B (Cc2d1b), mRNA.				A830039B04Rik	A830039B04Rik
Mus musculus	RefSeq	ILMN_254812	ILMN_254812	SLC8A3	NM_080440.1	NM_080440.1		110893	17978253	NM_080440.1	Slc8a3	NP_536688.1	ILMN_2954449	004060328	S	3157	GACAGGAGTTCCATGTGTCCGCTGGCACTCTGGCCTTCTCGGTCACTCTT	12	-	82118520-82118569	12qD1	Mus musculus solute carrier family 8 (sodium/calcium exchanger), member 3 (Slc8a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + cation(out) = Ca2+(out) + cation(in) [goid 15368] [evidence IDA]	MGC90626; AW742262; Ncx3	MGC90626; AW742262; Ncx3
Mus musculus	RefSeq	ILMN_213168	ILMN_213168	CWF19L2	NM_027545.1	NM_027545.1		244672	30842791	NM_027545.1	Cwf19l2	NP_081821.1	ILMN_2860135	002060139	S	3871	CTGTCCCACCTCTGCTTTTGTCCTGGTTCCAGTTACTTGTTGATGCACAC	9	+	3479154-3479203	9qA1	Mus musculus CWF19-like 2, cell cycle control (S. pombe) (Cwf19l2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	3230401L03Rik; 9030209E10	3230401L03Rik; 9030209E10
Mus musculus	MEEBO	ILMN_212386	ILMN_212386	5830435K17RIK	scl0101685.1_11	NM_175318.2			31341588	NM_175318.2	5830435K17Rik		ILMN_2625831	001430315	S	2391	ACGGGTGCCGGCCTTGATCCTGATGAGCTATGCACGCTAATGTGGGACCA										
Mus musculus	MEEBO	ILMN_194942	ILMN_194942	UGCG	scl25391.9_273				31543924	NM_011673	Ugcg		ILMN_2511089	004210440	S	3	GTCCGTCGGTTTGTTTAGTGGAGTTTGGTGGATGCCCTTTGCACTGCTGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine [goid 8120] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_232402	ILMN_232402	4933421E11RIK	NM_001039478.1	NM_001039478.1		321000	87162471	NM_001039478.1	4933421E11Rik	NP_001034567.1	ILMN_3033621	005720767	I	56	ATCCGGAGCTCACTCTCCAGAGCCCTTTGCATCGCTTGGCTGTCATGGCT	3	+	106487960-106488003:106488004-106488009	3qF2.3	Mus musculus RIKEN cDNA 4933421E11 gene (4933421E11Rik), transcript variant 3, mRNA.				AI450568; 2010012G17Rik; Rif1	AI450568; 2010012G17Rik; Rif1
Mus musculus	RefSeq	ILMN_213389	ILMN_231736	A030005L19RIK	XM_896385.2	XM_896385.2		77922	94363731	XM_896385.2	A030005L19Rik	XP_901478.1	ILMN_1236066	006110487	S	436	TCCTACCTAGGAGATATGGAGGCCACACTGGTGTCCTGCTGGTAAGCATT	1	+	82910335-82910384	1qC5	PREDICTED: Mus musculus RIKEN cDNA A030005L19 gene (A030005L19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196460	ILMN_196460	AA617276	XM_131812.3	XM_131812.3			38078967	XM_131812.3	AA617276		ILMN_1250198	003890427	S	333	GGTTCGCTCCAGGTGCAAACTCAGAGTACTCAAATGGAGAGATGAACAGC										
Mus musculus	RefSeq	ILMN_211524	ILMN_211524	GAPT	NM_177713.3	NM_177713.3		238875	142360052	NM_177713.3	Gapt	NP_808381.1	ILMN_1231000	003400204	S	1746	CTTCCAGCCTCCCTCATTTCAAACCTACACTTCCTTTTATAGACCTTGCT	13	-	111143082-111143131	13qD2.2	Mus musculus Grb2-binding adaptor, transmembrane (Gapt), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC141259	MGC141259
Mus musculus	MEEBO	ILMN_190862	ILMN_190862	2310001K24RIK	scl069517.1_9						2310001K24Rik		ILMN_1219821	000270138	S	1	TTCTCGGCCACCGTCTTACCCTTCGCCCGAGCTGGCACCACCACATCCCC										
Mus musculus	RefSeq	ILMN_220197	ILMN_257373	RPUSD4	NM_028040.2	NM_028040.2		71989	142386869	NM_028040.2	Rpusd4	NP_082316.1	ILMN_2718974	001780348	S	1513	GAGCCAGGGATTTTGTCAACTAGAGTATGGGTGCTGTCCTGCCCTAGCAG	9	+	35083258-35083307	9qA4	Mus musculus RNA pseudouridylate synthase domain containing 4 (Rpusd4), mRNA.		The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]	2410001E19Rik	2410001E19Rik
Mus musculus	MEEBO	ILMN_184138	ILMN_184138	TNN	scl0329278.1_25				31342877	NM_177839	Tnn		ILMN_2416178	003140736	S	18	GGAAATCTTTAGAAATTGGTGGATATCTCTGTATCCATCTGATAATATAG						The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IDA]	Interacting selectively with an integrin [goid 5178] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223221	ILMN_223221	CRABP2	NM_007759.2	NM_007759.2		12904	118131164	NM_007759.2	Crabp2	NP_031785.1	ILMN_1214483	006180348	S	604	TGCCCGCTACAGGACACAAACCTCCCTCCCACGTCCATCTTACAAACTAG	3	+	87756998-87757047	3qF1	Mus musculus cellular retinoic acid binding protein II (Crabp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]	Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with cyclins, proteins whose levels in a cell varies markedly during the cell cycle, rising steadily until mitosis, then falling abruptly to zero. As cyclins reach a threshold level, they are thought to drive cells into G2 phase and thus to mitosis [goid 30332] [evidence ISO]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid [goid 1972] [evidence IDA]	Crabp-2; AI893628; CrabpII	Crabp-2; AI893628; CrabpII
Mus musculus	RefSeq	ILMN_215976	ILMN_215976	PSMB10	NM_013640.2	NM_013640.2		19171	142373194	NM_013640.2	Psmb10	NP_038668.1	ILMN_2757870	005870398	S	776	ATTGAGCACCCCCACCGAGCCTGTGCAGAGAGCTGGCCGTTACCGATTTG	8	-	108459785-108459805:108459896-108459924	8qD3	Mus musculus proteasome (prosome, macropain) subunit, beta type 10 (Psmb10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	Mecl1	Mecl1
Mus musculus	RefSeq	ILMN_214199	ILMN_214199	ARMCX1	NM_030066.2	NM_030066.2		78248	46402516	NM_030066.2	Armcx1	NP_084342.1	ILMN_2645448	000780050	S	1979	AATTCTTAGGTTTTCATTGCGCTTGTGTAGCAAAGGGATCCTTTGAGCTG	X	+	131256132-131256181	XqE3	Mus musculus armadillo repeat containing, X-linked 1 (Armcx1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	3010033I09Rik; ALEX1	3010033I09Rik; ALEX1
Mus musculus	RefSeq	ILMN_201177	ILMN_201177	LOC384896	XM_357927.1	XM_357927.1			38089629	XM_357927.1	LOC384896		ILMN_1224888	006270612	S	140	CCAGCAGCTGTACGTCAACGCAAGTGGTACTGTGCTTCAGCTCCATAGAG										
Mus musculus	MEEBO	ILMN_192176	ILMN_192176	IGK-V1	scl0016081.1_163						Igk-V1		ILMN_2485684	005310347	S	20	CTGCTCTCAAAGTACACATGTTCCTCCCAGCTTCGGAGGGGGGACCAAGC										
Mus musculus	RefSeq	ILMN_222564	ILMN_222564	MKRN2	NM_023290.2	NM_023290.2		67027	88853569	NM_023290.2	Mkrn2	NP_075779.2	ILMN_1213920	006900176	S	2054	ATTACCTGTGTGCTTTTCACTTGGTTGTTCATGAACTGCAGAGGGGGCTC	6	+	115568502-115568551	6qE3	Mus musculus makorin, ring finger protein, 2 (Mkrn2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2610002L04Rik; C81377	2610002L04Rik; C81377
Mus musculus	Riken	ILMN_205765	ILMN_205765	C920011N12RIK	ri|C920011N12|PX00178G17|AK050603|1597					AK050603	C920011N12Rik		ILMN_1219601	002030280	S	1333	GTGGGTATAGGCACTTACTGCTGTTTGATCCCCAGGGCCCACATGGTATA										
Mus musculus	RefSeq	ILMN_212199	ILMN_212199	A030007L17RIK	NM_026637.2	NM_026637.2		68252	31560135	NM_026637.2	A030007L17Rik	NP_080913.1	ILMN_2864906	002070661	S	891	CTCAGGGGCGCACTGCTGCGCTTGGTCTGCTTTCTGCTTGTATCCGATCG	6	-	54915094-54915143	6qB3	Mus musculus RIKEN cDNA A030007L17 gene (A030007L17Rik), mRNA.				AA673177	AA673177
Mus musculus	RefSeq	ILMN_196393	ILMN_196393	5430409I15RIK	XM_147895.1	XM_147895.1			20898651	XM_147895.1	5430409I15Rik		ILMN_1246207	000870204	S	1008	TCTGTCATTTTACTCAGAAGCCCATACACAGGGTCTAGCAGATAACGCCG										
Mus musculus	RefSeq	ILMN_214572	ILMN_214572	HTR2A	NM_172812.1	NM_172812.1		15558	27753984	NM_172812.1	Htr2a	NP_766400.1	ILMN_2725529	003310709	S	1612	TACGTGGCTATCCAGAACCCCATTCACCATAGCCGCTTCAACTCCAGAAC	14	+	75044901-75044950	14qD3	Mus musculus 5-hydroxytryptamine (serotonin) receptor 2A (Htr2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 51378] [evidence ISO]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISO]	MGC124302; Htr-2; E030013E04; Htr2; MGC124301	MGC124302; Htr-2; E030013E04; Htr2; MGC124301
Mus musculus	Riken	ILMN_202041	ILMN_202041	3010002I12RIK	ri|3010002I12|ZX00055A20|AK013889|1042					AK013889	3010002I12Rik		ILMN_2546563	005820040	S	827	CCCAGTGCTCCAGGCATGTTTATAACTGGAGGTAAATGTGTCCATATTCC										
Mus musculus	RefSeq	ILMN_199401	ILMN_199401	OLFR330	NM_146879.1	NM_146879.1		258879	22129126	NM_146879.1	Olfr330	NP_667090.1	ILMN_1235408	001940136	S	895	AAGAATGTCACAGAGGCTATGAAGAAACTGTTAGTTGTGAGCACCCTCTT	11	-	58342542-58342591	11qB1.3	Mus musculus olfactory receptor 330 (Olfr330), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	RP23-465K20.12; MOR275-1	RP23-465K20.12; MOR275-1
Mus musculus	RefSeq	ILMN_229771	ILMN_229771	TM6SF1	NM_145375.1	NM_145375.1		107769	21703751	NM_145375.1	Tm6sf1	NP_663350.1	ILMN_2886981	003060332	S	1063	CTCTGCCGACTCTACACGCAGTTTCAAGAGCCCTACCTAAAGGACCCTGC	7	+	81749266-81749315	7qD3	Mus musculus transmembrane 6 superfamily member 1 (Tm6sf1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI428514; MGC25583; C630016D09Rik; BC023123	AI428514; MGC25583; C630016D09Rik; BC023123
Mus musculus	RefSeq	ILMN_210109	ILMN_210109	4933424G06RIK	XM_129743.5	XM_129743.5		71166	94363298	XM_129743.5	4933424G06Rik	XP_129743.5	ILMN_2602314	006400201	S	1030	CAACAACCCTGGGACTGTGGTTTGAGCCCAGAGCTGGTATCCTGAAGCCC	1	+	36814708-36814757	1qB	PREDICTED: Mus musculus RIKEN cDNA 4933424G06 gene (4933424G06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213747	ILMN_213747	OLFR1317	NM_146448.1	NM_146448.1		258440	33238989	NM_146448.1	Olfr1317	NP_666659.1	ILMN_2640357	005910133	S	885	GGTTGCAATGAGGAGACTCTTTGCTAGGGCTTTAAGTTTCATTGACAGCT	2	+	111982988-111983037	2qE3	Mus musculus olfactory receptor 1317 (Olfr1317), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR245-4	MOR245-4
Mus musculus	RefSeq	ILMN_261570	ILMN_261570	NDUFA3	NM_025348.1	NM_025348.1		66091	21539586	NM_025348.1	Ndufa3	NP_079624.1	ILMN_2792560	006330477	S	176	CCTACAACTACCCAGTGCCTGTGAGAGATGACGGGAACATGCCTGATGTG	7	+	3222582-3222594:3223088-3223124	7qA1	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3 (Ndufa3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	1010001M12Rik; 1700022J01Rik	1010001M12Rik; 1700022J01Rik
Mus musculus	RefSeq	ILMN_206827	ILMN_328008	ENSMUSG00000054044	XM_001477458.1	XM_001477458.1		791308	149258848	XM_001477458.1	ENSMUSG00000054044	XP_001477508.1	ILMN_2582966	003390008	S	1421	GCCAGTCTGAGCCAAGCCTGGTCCACATAGAAAGTTTCAGACCAGCTCAG					PREDICTED: Mus musculus predicted gene, ENSMUSG00000054044 (ENSMUSG00000054044), mRNA.					
Mus musculus	RefSeq	ILMN_199579	ILMN_199579	LOC382758	XM_356661.1	XM_356661.1			38074546	XM_356661.1	LOC382758		ILMN_1233364	000510348	S	452	GTCTGACACTGAAGAGGAGGCAGTCACCTAAGCAGGCTCGGGGAAGATGG										
Mus musculus	RefSeq	ILMN_220009	ILMN_220009	CASP8	NM_009812.2	NM_009812.2		12370	110626095	NM_009812.2	Casp8	NP_033942.1	ILMN_1243876	002750537	S	1635	CCGAGATCCTGTGAATGGAACCTGGTATATTCAGTCACTTTGCCAGAGCC	1	+	58901621-58901670	1qC1.3	Mus musculus caspase 8 (Casp8), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A heterodimer associated with 90S and 66S preribosomes in the nucleolus; involved in ribosomal large subunit biogenesis [goid 30690] [evidence IMP]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	MACH; Caspase-8; FLICE; Mch5	MACH; Caspase-8; FLICE; Mch5
Mus musculus	MEEBO	ILMN_187758	ILMN_187758	B930095G15RIK	scl45942.1_12				31342848	NM_177121	B930095G15Rik		ILMN_2446880	000510427	S	19	GCCACTCACGAATGCATGGAATGTTTTGATCTTGACACGAAACTGCCAGA										
Mus musculus	RefSeq	ILMN_216365	ILMN_216365	CRYBB2	NM_007773.3	NM_007773.3		12961	145966805	NM_007773.3	Crybb2	NP_031799.1	ILMN_2670240	004010445	S	577	TCTGTGCGTCGCATCCGTGACATGCAGTGGCACCAGCGAGGTGCCTTCCA				5qF	Mus musculus crystallin, beta B2 (Crybb2), mRNA.		The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Aey2; Cryb-2; Phil	Aey2; Cryb-2; Phil
Mus musculus	RefSeq	ILMN_200490	ILMN_200490	LOC384322	XM_357569.1	XM_357569.1			38082687	XM_357569.1	LOC384322		ILMN_1226063	003170437	S	177	CTCCCAAACTGTGGCAGGTATCAGCACTCCAAATGCTACCTCGCCAACTG										
Mus musculus	RefSeq	ILMN_212568	ILMN_212568	COL25A1	NM_029838.3	NM_029838.3		77018	46397405	NM_029838.3	Col25a1	NP_084114.2	ILMN_1220734	001400019	S	1115	TCAATCACGGCTTTCTCTCTGCTGATCAGCAGCTCATTAAACGCCGGCTG	3	+	130178527-130178576	3qG3	Mus musculus collagen, type XXV, alpha 1 (Col25a1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2700062B08Rik	2700062B08Rik
Mus musculus	RefSeq	ILMN_222877	ILMN_222877	DTWD1	NM_026981.1	NM_026981.1		69185	21312231	NM_026981.1	Dtwd1	NP_081257.1	ILMN_2756074	005270711	S	1021	CTTGTCCTGGGCTCTTGCAGTCGAGCCTTGTTTACTCCGGGGTGGTAACC	2	+	125990725-125990774	2qF1	Mus musculus DTW domain containing 1 (Dtwd1), mRNA.				1810033A06Rik	1810033A06Rik
Mus musculus	RefSeq	ILMN_212493	ILMN_237507	AQP6	NM_175087.4	NM_175087.4		11831	146198554	NM_175087.4	Aqp6	NP_780296.1	ILMN_2640583	006370356	S	490	ATGGCCGGCAGACCTTGGCGTCCCCAGCTGCCATGATTGGAACCTCTGTG				15qF1	Mus musculus aquaporin 6 (Aqp6), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]	AI790337	AI790337
Mus musculus	Riken	ILMN_205082	ILMN_205082	D630004B07RIK	ri|D630004B07|PX00196F05|AK052606|3282					AK052606	D630004B07Rik		ILMN_1238721	006060711	S	2946	ACACACGCTGTATCTTCCCAAGTGTTCCCCACACACCGGGCGCACTGCTC										
Mus musculus	Riken	ILMN_205951	ILMN_205951	APC	ri|C230014E02|PX00173F02|AK048709|3580					AK048709	Apc		ILMN_1219115	007200746	S	3089	CAGGCCAGAGGGAGAAAGCTGTGGTGGGCATTCTCTATACATACCATCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence ISO]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; The establishment, maintenance and elaboration of a pattern along a line or a point [goid 9798] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IDA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]		
Mus musculus	RefSeq	ILMN_233624	ILMN_233624	ZFP72	NM_001081680.1	NM_001081680.1		238722	126157467	NM_001081680.1	Zfp72	NP_001075149.1	ILMN_2920059	004180431	S	1116	CAGCCCTTATTCAACACCAAAGAATTCATACTGGAGAGAAACCCTACAAG	13	-	74509337-74509386	13qC1	Mus musculus zinc finger protein 72 (Zfp72), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Zfp74	Zfp74
Mus musculus	RefSeq	ILMN_197368	ILMN_233624	ZFP72	NM_001081680.1	NM_001081680.1		238722	126157467	NM_001081680.1	Zfp72	NP_001075149.1	ILMN_1236556	004880594	S	1330	CAGCTGTGAAGATTCTGGGAAAGCCTTTAATAATGGGGAAGCCCTTCCTC	13	-	74509123-74509172	13qC1	Mus musculus zinc finger protein 72 (Zfp72), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Zfp74	Zfp74
Mus musculus	MEEBO	ILMN_213075	ILMN_213075	FBXL7	scl00319605.2_158	NM_176959.2			31342471	NM_176959.2	Fbxl7		ILMN_2633301	006940424	S	1195	CCCCACACACCAGGGAGAGGTACTGGTTTCCATAATAATGTTTTATACAG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]			
Mus musculus	RefSeq	ILMN_220559	ILMN_220559	9430007A20RIK	NM_198662.2	NM_198662.2		381572	142376265	NM_198662.2	9430007A20Rik	NP_941064.1	ILMN_2723726	006660554	S	1234	CCCCTGTTCCTTGAACATAGTGAATGCTGTAGTGAGTTATATAAAGGACT	4	+	144119084-144119133	4qE1	Mus musculus RIKEN cDNA 9430007A20 gene (9430007A20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Gm1034	Gm1034
Mus musculus	RefSeq	ILMN_241135	ILMN_241135	PRX	NM_198048.1	NM_198048.1		19153	37674284	NM_198048.1	Prx	NP_932165.1	ILMN_3154269	005050093	A	4503	CCCCAGCCTAGCCCCCCATTTTGTGTGTGACATTACTAGCACTAATCCTC	7	+	28304895-28304944	7qA3	Mus musculus periaxin (Prx), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	L-Periaxin	L-Periaxin
Mus musculus	RefSeq	ILMN_209173	ILMN_241135	PRX	NM_198048.1	NM_198048.1		19153	37674284	NM_198048.1	Prx	NP_932165.1	ILMN_2593225	000730243	S	4456	TCTGAAGCCCCAGGACAGCTGTGGATTCCCCCTCTTGTCTTTCCATTCCC	7	+	28304848-28304853:28304854-28304897	7qA3	Mus musculus periaxin (Prx), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	L-Periaxin	L-Periaxin
Mus musculus	Riken	ILMN_206606	ILMN_206606	GFPT1	ri|E030031M15|PX00206G13|AK087173|1200					AK087173	Gfpt1		ILMN_2581335	004830739	S	1	GAGTTGAGAGCGAAGCGAGCGCTGAGTCGGACTGTCGGGTCTGAGCTGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate [goid 4360] [evidence IEA]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217575	ILMN_217575	ACOT11	NM_025590.3	NM_025590.3		329910	31543862	NM_025590.3	Acot11	NP_079866.2	ILMN_2733465	005310452	S	2624	GTCTGGAAGAGGCAACAGTTTGGAGATCCTGTCATCATGGGACGTCAGTG	4	-	106420095-106420144	4qC7	Mus musculus acyl-CoA thioesterase 11 (Acot11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [pmid 11696000] [evidence IEP]	Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]	BFIT1; Them1; AW060409; BFIT; Thea; mKIAA0707; MGC25974; 2010309H15Rik; 1110020M10Rik	BFIT1; Them1; AW060409; BFIT; Thea; mKIAA0707; MGC25974; 2010309H15Rik; 1110020M10Rik
Mus musculus	RefSeq	ILMN_217575	ILMN_217575	ACOT11	NM_025590.3	NM_025590.3		329910	31543862	NM_025590.3	Acot11	NP_079866.2	ILMN_2799351	004850072	S	5123	CAGGAGGTTCAGGGCTTCCTTCATCCCCAGATACATAGCAAGTGCAGGGC	4	-	106417596-106417645	4qC7	Mus musculus acyl-CoA thioesterase 11 (Acot11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [pmid 11696000] [evidence IEP]	Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]	BFIT1; Them1; AW060409; BFIT; Thea; mKIAA0707; MGC25974; 2010309H15Rik; 1110020M10Rik	BFIT1; Them1; AW060409; BFIT; Thea; mKIAA0707; MGC25974; 2010309H15Rik; 1110020M10Rik
Mus musculus	RefSeq	ILMN_217575	ILMN_217575	ACOT11	NM_025590.3	NM_025590.3		329910	31543862	NM_025590.3	Acot11	NP_079866.2	ILMN_1227579	006250128	S	5420	CTCGAGGACGGAAAGACCTGTGGGAACCTTTGCTCTGCCGTTTTGTAGAC	4	-	106417299-106417348	4qC7	Mus musculus acyl-CoA thioesterase 11 (Acot11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [pmid 11696000] [evidence IEP]	Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]	BFIT1; Them1; AW060409; BFIT; Thea; mKIAA0707; MGC25974; 2010309H15Rik; 1110020M10Rik	BFIT1; Them1; AW060409; BFIT; Thea; mKIAA0707; MGC25974; 2010309H15Rik; 1110020M10Rik
Mus musculus	RefSeq	ILMN_220358	ILMN_220358	ATP6V1C1	NM_025494.1	NM_025494.1		66335	13384915	NM_025494.1	Atp6v1c1	NP_079770.1	ILMN_2776075	001260671	S	1001	GTGCGGTGGCTTAAAGTGAATTTCAGTGAGGCGTTTATTGCGTGGATTCA	15	+	38633724-38633773	15qB3.1	Mus musculus \ATPase, H+ transporting, lysosomal V1 subunit C1 (Atp6v1c1), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	1700025B18Rik; U13839	1700025B18Rik; U13839
Mus musculus	Riken	ILMN_206876	ILMN_206876	D930042A21RIK	ri|D930042A21|PX00203M12|AK086621|3561					AK086621	D930042A21Rik		ILMN_2583351	005220528	S	3231	GCTGTCGCTGGTCCACTGAGCTGCGGTAACAGGATTCCAGGCTTTGCTGA										
Mus musculus	RefSeq	ILMN_186323	ILMN_236530	DHODH	NM_020046.3	NM_020046.3		56749	85677502	NM_020046.3	Dhodh	NP_064430.1	ILMN_1244112	006060215	S	1892	GTCTGTAGGGGGCTCCCCAGGACTCTACCTTTCAGCTGACCTTGGCTTAT	8	-	112117524-112117573	8qD3	Mus musculus dihydroorotate dehydrogenase (Dhodh), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate [goid 6222] [evidence IEA]; The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (S)-dihydroorotate + O2 = orotate + H2O2 [goid 4158] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-dihydroorotate + acceptor = orotate + reduced acceptor [goid 4152] [evidence IEA]	2810417D19Rik; AI834883	2810417D19Rik; AI834883
Mus musculus	RefSeq	ILMN_214079	ILMN_214079	NDOR1	NM_178239.2	NM_178239.2		78797	31342476	NM_178239.2	Ndor1	NP_839970.1	ILMN_3068081	000430102	I	1596	TGGTCTAGCTGAATTTCTGCATCCAGACGGGGACCGCCCTATGTACCCCA	2	-	25070250-25070299	2qA3	Mus musculus NADPH dependent diflavin oxidoreductase 1 (Ndor1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	4930447P04Rik; NR1	4930447P04Rik; NR1
Mus musculus	RefSeq	ILMN_214079	ILMN_214079	NDOR1	NM_178239.2	NM_178239.2		78797	31342476	NM_178239.2	Ndor1	NP_839970.1	ILMN_3146204	006100630	A	3192	TGGACCAGGAGCCCTCACTTGGGAGATGCAGACAAATCTAAGCTCACTTC	2	-	25067089-25067138	2qA3	Mus musculus NADPH dependent diflavin oxidoreductase 1 (Ndor1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	4930447P04Rik; NR1	4930447P04Rik; NR1
Mus musculus	RefSeq	ILMN_189350	ILMN_255350	SPHK1	NM_011451.2	NM_011451.2		20698	118130164	NM_011451.2	Sphk1	NP_035581.1	ILMN_2650336	004900767	S	40	AGCAGCAAGTGCTCTTACCTACCAAGCTCTCTCTCCAGCCCCATGTGGTG	11	+	116396093-116396134:116396135-116396142	11qE2	Mus musculus sphingosine kinase 1 (Sphk1), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that modulates the frequency, rate, or extent of interleukin-1 beta production [goid 32651] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence ISA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the reaction: ATP + sphinganine = ADP + sphinganine 1-phosphate [goid 8481] [evidence ISA]; Catalysis of the reaction: ATP + sphinganine = ADP + sphinganine 1-phosphate [goid 8481] [evidence ISO]	1110006G24Rik; SK1	1110006G24Rik; SK1
Mus musculus	RefSeq	ILMN_189350	ILMN_255350	SPHK1	NM_011451.2	NM_011451.2		20698	118130164	NM_011451.2	Sphk1	NP_035581.1	ILMN_1232884	000620372	S	1449	GGACCAGTTGCATATAGAAGACACTCCCCATTGCTCTTAGGGACCTTCCC	11	+	116397901-116397950	11qE2	Mus musculus sphingosine kinase 1 (Sphk1), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that modulates the frequency, rate, or extent of interleukin-1 beta production [goid 32651] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence ISA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the reaction: ATP + sphinganine = ADP + sphinganine 1-phosphate [goid 8481] [evidence ISA]; Catalysis of the reaction: ATP + sphinganine = ADP + sphinganine 1-phosphate [goid 8481] [evidence ISO]	1110006G24Rik; SK1	1110006G24Rik; SK1
Mus musculus	MEEBO	ILMN_218540	ILMN_218540	GMNN	scl44186.8.1_13	NM_020567.1			10181217	NM_020567.1	Gmnn		ILMN_2697069	002970747	S	753	CCTCTGGATAACTTTGAATCACCGGATAGTCAGGAATTTGATTCTGAAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200343	ILMN_200343	LOC381684	XM_355660.1	XM_355660.1			38081365	XM_355660.1	LOC381684		ILMN_1220618	006580221	S	373	ACCGAGGAAGTCATTCCTCTGGGAAGATCCGAGGCCACCCTTCACGGCGA										
Mus musculus	RefSeq	ILMN_212261	ILMN_212261	B3GNT1	NM_175383.2	NM_175383.2		108902	92110030	NM_175383.2	B3gnt1	NP_780592.1	ILMN_1257876	007100221	S	1961	GTGCCCTCCAGTAGGTTGGGCTGCTCATTTGCCTTCGGATGACATTATGT	19	+	5041060-5041109	19qA	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1 (B3gnt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R [goid 8532] [evidence IEA]	iGNT; B3gnt6; BETA3GNT1; iGAT; 1500032M01Rik	iGNT; B3gnt6; BETA3GNT1; iGAT; 1500032M01Rik
Mus musculus	RefSeq	ILMN_216584	ILMN_261613	SLCO6C1	NM_028942.4	NM_028942.4		74441	153791415	NM_028942.4	Slco6c1	NP_083218.1	ILMN_2672845	004490142	S	2361	AATTTCAGAAGAGAAAAAGAATATTAAATCATCTATGTGCAATCTTTATT				1qD	Mus musculus solute carrier organic anion transporter family, member 6c1 (Slco6c1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISO]	Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISO]	C79179; 4933404A18Rik	C79179; 4933404A18Rik
Mus musculus	RefSeq	ILMN_197877	ILMN_197877	LOC230970	XM_149548.4	XM_149548.4			38079067	XM_149548.4	LOC230970		ILMN_2529674	003140561	S	2087	CAGGCTGGTTTGGGACCGGCTGCCAGATGAGGTGTGCTTGTGCCAATGAT										
Mus musculus	RefSeq	ILMN_199850	ILMN_199850	LOC383983	XM_357363.1	XM_357363.1			38078101	XM_357363.1	LOC383983		ILMN_1246481	000070129	S	940	GTGGAGAATTGTGAGACCGAAGTGGAGCACACAGTGGAGTACAGTGTCAC										
Mus musculus	RefSeq	ILMN_212730	ILMN_212730	2410002F23RIK	NM_025880.3	NM_025880.3		66976	40254378	NM_025880.3	2410002F23Rik	NP_080156.1	ILMN_2753524	000730632	S	2454	GGGAGTGTAGCCCTTTGTCACCTACCAGCTTGCCCTGTGTCTTTGCAGCC	7	+	44118607-44118656		Mus musculus RIKEN cDNA 2410002F23 gene (2410002F23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212730	ILMN_212730	2410002F23RIK	NM_025880.3	NM_025880.3		66976	40254378	NM_025880.3	2410002F23Rik	NP_080156.1	ILMN_2965641	007000324	S	4090	GCTGCACAGATGGCCCCTGGCCAATGCAGATCTGGATTTAGTGGAGGGGT	7	+	44120243-44120292		Mus musculus RIKEN cDNA 2410002F23 gene (2410002F23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212730	ILMN_212730	2410002F23RIK	NM_025880.3	NM_025880.3		66976	40254378	NM_025880.3	2410002F23Rik	NP_080156.1	ILMN_2629648	002490367	S	4122	TGGATTTAGTGGAGGGGTGAGGTGGGCAGCCCTGGAACTTCTGCCTTCGT	7	+	44120275-44120324		Mus musculus RIKEN cDNA 2410002F23 gene (2410002F23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215718	ILMN_215718	SOX15	NM_009235.1	NM_009235.1		20670	22094090	NM_009235.1	Sox15	NP_033261.1	ILMN_2662811	004010259	S	622	TACCTATCCCCAGACTCTTCCACTCCATATAATACTTCCCTTGCTGGAGC	11	+	69470049-69470098	11qB3	Mus musculus SRY-box containing gene 15 (Sox15), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whose specific outcome is the progression of the myoblast over time, from its formation to the mature structure. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 48627] [evidence IMP]; The regrowth of muscle tissue to repair injured or damaged muscle fibers in the postnatal stage [goid 43403] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_192028	ILMN_192028	SCL0003704.1_245	scl0003704.1_245	AK046620.1			26091620	AK046620.1	scl0003704.1_245		ILMN_2484338	006520707	S	12	TGTCCCGGGCTGGCGGACGCCGACTTGGTTGCGGCCCTCGGTGGCGGAGC										
Mus musculus	RefSeq	ILMN_217805	ILMN_217805	CRYAB	NM_009964.1	NM_009964.1		12955	6753529	NM_009964.1	Cryab	NP_034094.1	ILMN_2840213	005310598	S	777	GGAGGAACTCAAAGTCAAGGTTCTGGGGGACGTGATTGAGGTCCACGGCA	9	+	50506798-50506847	9qA5.3	Mus musculus crystallin, alpha B (Cryab), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence TAS]	Crya-2; Crya2	Crya-2; Crya2
Mus musculus	MEEBO	ILMN_209381	ILMN_209381	A830021M18	scl47979.1.1_47				51769095	XM_488740	A830021M18		ILMN_2595299	005420039	S	229	CCGTGGTGTCCTGGTCTTCTTACTGATGCTTCGTTCTCGGACCTCTACCC										
Mus musculus	RefSeq	ILMN_215130	ILMN_215130	KCTD15	NM_146188.1	NM_146188.1		233107	22122736	NM_146188.1	Kctd15	NP_666300.1	ILMN_2655869	004920561	S	2001	ACCCTCCACCCTAGCGCCAGTTTCCCCATTCATATGCACACCAAGTGTTA	7	-	35424396-35424445	7qB1	Mus musculus potassium channel tetramerisation domain containing 15 (Kctd15), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	MGC25497; BC031749	MGC25497; BC031749
Mus musculus	RefSeq	ILMN_200383	ILMN_200383	LOC386381	XM_359195.1	XM_359195.1			38081482	XM_359195.1	LOC386381		ILMN_2538564	005810164	S	208	GGAGCCAGAGCGCAAGAGCGCAAGAGTTCAAGCGCTTTATTGCTTACATC										
Mus musculus	RefSeq	ILMN_187315	ILMN_187315	ZFP326	NM_018759.1	NM_018759.1		54367	9055385	NM_018759.1	Zfp326	NP_061229.1	ILMN_2481391	006510524	S	383	CCCGCTTCGGAGGTAGTTATGGTGGTCGATTTGAGAGCTCCTACCGGAAT	5	+	106317545-106317594	5qE5	Mus musculus zinc finger protein 326 (Zfp326), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	5730470H14Rik; ZAN75	5730470H14Rik; ZAN75
Mus musculus	RefSeq	ILMN_187315	ILMN_187315	ZFP326	NM_018759.1	NM_018759.1		54367	9055385	NM_018759.1	Zfp326	NP_061229.1	ILMN_2481389	004230735	S	5	AACCCGCTTCGGAGGTAGTTATGGTGGTCGATTTGAGAGCTCCTACCGGA	5	+	106305625-106305674	5qE5	Mus musculus zinc finger protein 326 (Zfp326), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	5730470H14Rik; ZAN75	5730470H14Rik; ZAN75
Mus musculus	RefSeq	ILMN_187315	ILMN_187315	ZFP326	NM_018759.1	NM_018759.1		54367	9055385	NM_018759.1	Zfp326	NP_061229.1	ILMN_2996021	001010427	S	2139	GCTGCTCTTGGGAGTGAACCTTTAAGTGTGCATTCAGTTTTTGAGTACTT	5	+	106344343-106344392	5qE5	Mus musculus zinc finger protein 326 (Zfp326), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	5730470H14Rik; ZAN75	5730470H14Rik; ZAN75
Mus musculus	RefSeq	ILMN_259806	ILMN_259806	TCF1	NM_009327.1	NM_009327.1		21405	6678240	NM_009327.1	Tcf1	NP_033353.1	ILMN_2960005	006330441	S	3438	TATCTGCGTGGTAAGTGGGATGCCCCGGTTTGATTCCCCAGCACTGACGG	5	-	115209653-115209702	5qF	Mus musculus transcription factor 1 (Tcf1), mRNA.				HNF1-alpha; HNF1; Hnf-1; Hnf1alpha; AI323641; Tcf-1; HNF1[a]	HNF1-alpha; HNF1; Hnf-1; Hnf1alpha; AI323641; Tcf-1; HNF1[a]
Mus musculus	RefSeq	ILMN_218291	ILMN_218291	TACSTD2	NM_020047.3	NM_020047.3		56753	113866004	NM_020047.3	Tacstd2	NP_064431.2	ILMN_1231513	004590382	S	1572	GGACTGCATCTATTTTTCTGCTTGTCCTTGATGTAGCTGATCCTAGAGAG	6	-	67484195-67484244	6qC1	Mus musculus tumor-associated calcium signal transducer 2 (Tacstd2), mRNA.				EGP-1; MGC141612; TROP2; MGC141613; GA733-1; C80403; Ly97	EGP-1; MGC141612; TROP2; MGC141613; GA733-1; C80403; Ly97
Mus musculus	RefSeq	ILMN_254247	ILMN_254247	BRD9	NM_001024508.2	NM_001024508.2		105246	112817627	NM_001024508.2	Brd9	NP_001019679.2	ILMN_2913089	003370382	S	2084	TCTGTGTCTCCTGAGCACCAGCAGCCAAGCCTGTTCATGATGATGTGCAC	13	+	74098020-74098069	13qC1	Mus musculus bromodomain containing 9 (Brd9), mRNA.				AL022779	AL022779
Mus musculus	RefSeq	ILMN_196423	ILMN_254247	BRD9	NM_001024508.2	NM_001024508.2		105246	112817627	NM_001024508.2	Brd9	NP_001019679.2	ILMN_1216614	001820360	S	2206	GAGGGTTCCTTCTGTTTCCTATTTGGGCACTGAGCCAGAGGATGGAGTTG	13	+	74098142-74098191	13qC1	Mus musculus bromodomain containing 9 (Brd9), mRNA.				AL022779	AL022779
Mus musculus	RefSeq	ILMN_219287	ILMN_219287	SPATA3	NM_027300.2	NM_027300.2		70060	141801662	NM_027300.2	Spata3	NP_081576.1	ILMN_2706809	004070750	S	820	CTGAGAACAGCATAATCTCTGCTATTACAATGAGGTGACGCCATCCCGGG	1	+	87926257-87926306	1qC5	Mus musculus spermatogenesis associated 3 (Spata3), transcript variant 2, mRNA.				Mtsarg1; 1700029H01Rik; 1700011N12Rik; 4930424D10Rik; Tsarg1	Mtsarg1; 1700029H01Rik; 1700011N12Rik; 4930424D10Rik; Tsarg1
Mus musculus	Riken	ILMN_206036	ILMN_206036	PTGER4, FP4, GPCR	ri|D130004L12|PX00181F22|AK051137|3773					AK051137	Ptger4, FP4, GPCR		ILMN_1259522	006550736	S	3594	CTTGAGCACGTCTGCAGTCCCAGGGCTGTGAATCACTGACAATCTCTGTC										
Mus musculus	MEEBO	ILMN_184637	ILMN_184637	D030041N04RIK	scl34994.10.1_240				27370517	NM_173012	D030041N04Rik		ILMN_2420284	001660468	S	13	AGTCCATCTCTACTGTATAATTTTGTCATCTTACTAAACGTTGCATAAAG										
Mus musculus	Riken	ILMN_203506	ILMN_203506	E430024E16RIK	ri|E430024E16|PX00100B24|AK088715|3095					AK088715	E430024E16Rik		ILMN_1230377	007550114	S	2872	CCCTAAAGAGTGGGGATTTGGTCAAGGTGGACAGGGACAGTCACAGCATG										
Mus musculus	RefSeq	ILMN_199621	ILMN_199621	LOC383749	XM_357222.1	XM_357222.1			38075297	XM_357222.1	LOC383749		ILMN_1250315	002750224	S	2404	GCACACACAGCACGTCAGCAACAGCTCTCACCCCATGTGACTCAGCAGTC										
Mus musculus	RefSeq	ILMN_221323	ILMN_221323	KATNAL1	NM_153572.1	NM_153572.1		231912	23956363	NM_153572.1	Katnal1	NP_705800.1	ILMN_2971577	006350437	S	1423	ATCAATGGCTTGAGTCCGGAAGAGATCCGGGCCCTGTCCAAGGAGGAGCT	5	-	149687815-149687864	5qG3	Mus musculus katanin p60 subunit A-like 1 (Katnal1), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP [goid 8568] [evidence IEA]	MGC40859	MGC40859
Mus musculus	RefSeq	ILMN_221208	ILMN_221208	CASP8AP2	NM_011997.1	NM_011997.1		26885	6753287	NM_011997.1	Casp8ap2	NP_036127.1	ILMN_2732508	000430411	S	6372	GGTCAGAATGTTTTTAATCATTAAAAGTTGTTATCAAATGAAAGACTAAA	4	+	32739848-32739897	4qA5	Mus musculus caspase 8 associated protein 2 (Casp8ap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IDA];  [goid 8625] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 16505] [evidence IDA]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	FLASH; mKIAA1315; D4Ertd659e; AA387232	FLASH; mKIAA1315; D4Ertd659e; AA387232
Mus musculus	RefSeq	ILMN_188302	ILMN_241891	D16ERTD472E	NM_025967.2	NM_025967.2		67102	31981097	NM_025967.2	D16Ertd472e	NP_080243.2	ILMN_1260073	004780112	S	2536	AACTGGCCTGGCTGTGTGCATTAGTCAATGTCCCATTGGTTTTGCTCTGT	16	-	78543846-78543895	16qC3.1	Mus musculus DNA segment, Chr 16, ERATO Doi 472, expressed (D16Ertd472e), mRNA.				AW536354; 1700010I10Rik; 2310009O17Rik; E330003K22Rik; AI256766	AW536354; 1700010I10Rik; 2310009O17Rik; E330003K22Rik; AI256766
Mus musculus	MEEBO	ILMN_212283	ILMN_212283	KRTAP16-9	scl00170657.1_235	NM_130876.2			24475785	NM_130876.2	Krtap16-9		ILMN_1229043	003400180	S	251	CTCCAACTTCTACTGAAGTGAATTGCTGTAATTAGAAGTAAACACGGGAC										
Mus musculus	RefSeq	ILMN_209273	ILMN_209273	OLFR348	NM_146944.1	NM_146944.1		258946	33239291	NM_146944.1	Olfr348	NP_667155.1	ILMN_2594241	004830064	S	742	GTGGTTTCTCTCTATTATGGAGCTATTATTGGTCTATATTTTGTCCCCTC	2	+	36642788-36642837	2qB	Mus musculus olfactory receptor 348 (Olfr348), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR136-8	MOR136-8
Mus musculus	RefSeq	ILMN_215245	ILMN_215245	ANXA2	NM_007585.3	NM_007585.3		12306	118131198	NM_007585.3	Anxa2	NP_031611.1	ILMN_2657175	003460296	S	1305	GGGCGTAGCGTCTGTGACATGAGACACTTCCTCTTATGTACTGTGTCGTG	9	+	69339523-69339572	9qC	Mus musculus annexin A2 (Anxa2), mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence ISS]	Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; An ongoing process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, resulting in the removal of small blood clots [goid 42730] [evidence IMP]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	AW215814; Cal1h	AW215814; Cal1h
Mus musculus	Riken	ILMN_204432	ILMN_204432	A630020I15RIK	ri|A630020I15|PX00144H22|AK041549|1859					AK041549	A630020I15Rik		ILMN_1228116	006450392	S	1677	GACCCAAGTTCAATTTCCCAGAACCCGTGTGTGTAAAAGCTGGGGATAGC										
Mus musculus	RefSeq	ILMN_218408	ILMN_218408	TMEM55A	NM_028264.2	NM_028264.2		72519	31541914	NM_028264.2	Tmem55a	NP_082540.1	ILMN_2695468	005310605	S	1959	GTCACCTAAAACTTCGCGTGGAATTCATGGACTCAGCTCTTGCACTGCCC	4	+	14842086-14842135	4qA1-qA2	Mus musculus transmembrane protein 55A (Tmem55a), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	AV001360; AI315591; 2610319K07Rik	AV001360; AI315591; 2610319K07Rik
Mus musculus	MEEBO	ILMN_193581	ILMN_193581	KAZALD1	scl6013.1.1_250				31341808	NM_178929	Kazald1		ILMN_2498514	004540112	S	5	CACCCAACTCTGATGCATCTTTGCCCCAGAGATAGATAAAACTACACTTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210520	ILMN_210520	ARPP21	scl0003419.1_30				31418493	BC053001	Arpp21		ILMN_2606443	004200255	S	1613	ATCCAGCGGTCTCTTTTCCTCCCCAGCATCTCCTGCCTATGTCGCCAACG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218965	ILMN_218965	ADK	NM_134079.1	NM_134079.1		11534	19527305	NM_134079.1	Adk	NP_598840.1	ILMN_2986899	006380095	S	1617	ATGTGCTTCAGACATCTGATGGACTTGGGGCAGCTGCCTAACCCGCAACA	14	+	20237013-20237062	14qA3	Mus musculus adenosine kinase (Adk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + adenosine = ADP + AMP [goid 4001] [evidence IDA]	AI255373; Ak; MGC6593; 5033405D03Rik; AI987814; 2310026J05Rik	AI255373; Ak; MGC6593; 5033405D03Rik; AI987814; 2310026J05Rik
Mus musculus	RefSeq	ILMN_200625	ILMN_200625	LOC383408	XM_357036.1	XM_357036.1			38084514	XM_357036.1	LOC383408		ILMN_1258863	005390014	S	480	CAGTGTGCAGCCACGGGCAGCCAAACAAGTTCAAACAGCCAACAGTGACA										
Mus musculus	MEEBO	ILMN_208609	ILMN_208609	MRPS15	scl066407.8_34						Mrps15		ILMN_2593872	005960491	S	590	CCGGAGGAAAAAGTTGCTCAAAATCCTCCGTCAGACCAACTATGATGTCT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	RefSeq	ILMN_228910	ILMN_228910	INTS6	NM_008715.2	NM_008715.2		18130	51467748	NM_008715.2	Ints6	NP_032741.2	ILMN_3161409	003360228	S	4335	GGGCTGCCACTCACTGAGACCTGTATGATGAGCACAGAGCACGGAAAATG	14	-	63295775-63295824	14qD1	Mus musculus integrator complex subunit 6 (Ints6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AI480962; 2900075H24Rik; HDB; DICE1; Notch2l; Ddx26	AI480962; 2900075H24Rik; HDB; DICE1; Notch2l; Ddx26
Mus musculus	RefSeq	ILMN_212987	ILMN_212987	SERAC1	NM_177311.3	NM_177311.3		321007	141802959	NM_177311.3	Serac1	NP_796285.1	ILMN_1258674	005890196	S	1900	GCAAGCCGAAGACAAAGGATGCGTTTTTGTACCAACGTACTCTACAGTTC	17	-	6044149-6044198	17qA1	Mus musculus serine active site containing 1 (Serac1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	D17Ertd141e; 4930511N22Rik	D17Ertd141e; 4930511N22Rik
Mus musculus	RefSeq	ILMN_216629	ILMN_212987	SERAC1	NM_177311.3	NM_177311.3		321007	141802959	NM_177311.3	Serac1	NP_796285.1	ILMN_2673385	003180520	S	1921	GCATCCTTTGTCTTCGGCTTGCAAATGTTCAAGTGGTTGACGTCCACAGG	17	-	6044128-6044177	17qA1	Mus musculus serine active site containing 1 (Serac1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	D17Ertd141e; 4930511N22Rik	D17Ertd141e; 4930511N22Rik
Mus musculus	Riken	ILMN_203983	ILMN_203983	A530021P12RIK	ri|A530021P12|PX00140N11|AK040738|2177					AK040738	A530021P12Rik		ILMN_2561472	003940154	S	2049	CACAGGACTTACCCTACCTGTGCACTTTTACCTGTAACACCAGGGCCCCC										
Mus musculus	Riken	ILMN_206708	ILMN_206708	E330037K16RIK	ri|E330037K16|PX00318L18|AK087891|1360					AK087891	E330037K16Rik		ILMN_1234434	000610014	S	1122	TTGGTACCCAAGGGTTGCCAAAGAGGCAGAGCCAGCACAGCCTGCTGTAG										
Mus musculus	Riken	ILMN_202555	ILMN_202555	4930417P05RIK	ri|4930417P05|PX00030A13|AK015161|1635					AK015161	4930417P05Rik		ILMN_1240435	006400088	S	1346	AGCAGTACAGATGGCTGTGGGTTCGTGGTCCTGTCTGGTCACAGGCTGCC										
Mus musculus	RefSeq	ILMN_227458	ILMN_227458	PSMB6	NM_008946.2	NM_008946.2		19175	31982098	NM_008946.2	Psmb6	NP_032972.2	ILMN_2895862	007650110	S	480	CGGAGGCTCCCGGAGCTCGTACATCTATGGCTATGTTGATGCTACGTATC	11	+	70343427-70343476	11qB3	Mus musculus proteasome (prosome, macropain) subunit, beta type 6 (Psmb6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	Lmp19; Mpnd	Lmp19; Mpnd
Mus musculus	Riken	ILMN_205648	ILMN_205648	A130028M21RIK	ri|A130028M21|PX00121P13|AK037592|3114					AK037592	A130028M21Rik		ILMN_1236687	006580161	S	2954	TGCAAGAAAATTAAGAGTCGCCAGGCGTAGTGGCGCACACCTTTAATCCC										
Mus musculus	RefSeq	ILMN_220870	ILMN_220870	LRIG3	NM_177152.4	NM_177152.4		320398	42475967	NM_177152.4	Lrig3	NP_796126.3	ILMN_1213273	006650612	S	3576	GCTTCCACACGCTACCTCAGCTGGGCTTCTATTTAAAGGAGACAGAATCC	10	+	125451998-125452047	10qD3	Mus musculus leucine-rich repeats and immunoglobulin-like domains 3 (Lrig3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9030421L11Rik; 9430095K15Rik; 9130004I02Rik; mKIAA3016	9030421L11Rik; 9430095K15Rik; 9130004I02Rik; mKIAA3016
Mus musculus	RefSeq	ILMN_214052	ILMN_214052	DDX51	NM_027156.2	NM_027156.2		69663	40538824	NM_027156.2	Ddx51	NP_081432.2	ILMN_2936936	000630368	S	4650	CCCTGAGCTTGGACAGAGAGGTGTGAAATGTTCCACTTAGAGGTCAACAC	5	+	111089342-111089391	5qF	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 (Ddx51), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	AA537002; R75505; 2310061O04Rik; C81583	AA537002; R75505; 2310061O04Rik; C81583
Mus musculus	RefSeq	ILMN_214052	ILMN_214052	DDX51	NM_027156.2	NM_027156.2		69663	40538824	NM_027156.2	Ddx51	NP_081432.2	ILMN_1254905	006650364	S	2178	GGTGACTGGACTGTGGTGATCAAAGTGCTTATACGTTAGCGTCTCCTGTC	5	+	111086870-111086919	5qF	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 (Ddx51), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	AA537002; R75505; 2310061O04Rik; C81583	AA537002; R75505; 2310061O04Rik; C81583
Mus musculus	RefSeq	ILMN_214052	ILMN_214052	DDX51	NM_027156.2	NM_027156.2		69663	40538824	NM_027156.2	Ddx51	NP_081432.2	ILMN_2643746	006420035	S	2448	TTTAAAAAGTCAGTGTATCAAAAAAGATAAACATTTTCATTTGTATTCAG	5	+	111087140-111087189	5qF	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 (Ddx51), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	AA537002; R75505; 2310061O04Rik; C81583	AA537002; R75505; 2310061O04Rik; C81583
Mus musculus	RefSeq	ILMN_191374	ILMN_191374	ZFP11	NM_172462.4	NM_172462.4		22648	122937378	NM_172462.4	Zfp11	NP_766050.1	ILMN_2785558	002710674	S	3200	AAGCTCAGCCCTCAGGCCATCTCAGCAGAAAAATAATCCTGCTTTCTGAG	5	-	130161136-130161185	5qG1.3	Mus musculus zinc finger protein 11 (Zfp11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Krox-6; Zfp-11; 6720465D24	Krox-6; Zfp-11; 6720465D24
Mus musculus	RefSeq	ILMN_218178	ILMN_218178	1700019H03RIK	NM_183161.3	NM_183161.3		228993	125347350	NM_183161.3	1700019H03Rik	NP_898984.3	ILMN_2999818	000540609	S	1840	TTTCTGCTTCTCTCCAGGAGTCAGGCTTGCCACTCCAGCTGGGCCGGTGT	2	+	180476626-180476675	2qH4	Mus musculus RIKEN cDNA 1700019H03 gene (1700019H03Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC28538; BC019537	MGC28538; BC019537
Mus musculus	RefSeq	ILMN_219746	ILMN_225953	MS4A8A	NM_022430.2	NM_022430.2		64381	120953176	NM_022430.2	Ms4a8a	NP_071875.2	ILMN_1256614	002340463	S	598	CATCAGTATCTCATCAGGATACATCTACCCTAGCTACTACCCTTACCAGG	19	-	11145214-11145263	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 8A (Ms4a8a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD20L5; 2010004L09Rik; Ms4a8; AI481240	CD20L5; 2010004L09Rik; Ms4a8; AI481240
Mus musculus	RefSeq	ILMN_199438	ILMN_199438	MRGPRB8	NM_207539.1	NM_207539.1		404240	46430533	NM_207539.1	Mrgprb8	NP_997422.1	ILMN_2986203	006200465	S	679	ACAGCACTGGTCGTCTTGATCTGTGGCTTTGGGATTGGCATATGCTTCTT	7	+	55644631-55644680	7qB4	Mus musculus MAS-related GPR, member B8 (Mrgprb8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgB8	MrgB8
Mus musculus	RefSeq	ILMN_199438	ILMN_199438	MRGPRB8	NM_207539.1	NM_207539.1		404240	46430533	NM_207539.1	Mrgprb8	NP_997422.1	ILMN_1230654	006350414	S	864	CCAGTGTGGGACTCTCAGGCTGATTCTTCAGAGAGCCATTCAAGAGAGCC	7	+	55644816-55644865	7qB4	Mus musculus MAS-related GPR, member B8 (Mrgprb8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgB8	MrgB8
Mus musculus	Riken	ILMN_206930	ILMN_206930	D430035B07RIK	ri|D430035B07|PX00194B02|AK085087|2343					AK085087	D430035B07Rik		ILMN_1240983	005260187	S	2033	TCACTGGGCCGAGGAAGGCCCATGTCGGGATGCATTGAGGTGTGGAATAG										
Mus musculus	RefSeq	ILMN_218566	ILMN_218566	DENND2A	NM_172477.3	NM_172477.3		209773	146149285	NM_172477.3	Dennd2a	NP_766065.1	ILMN_2697361	003120017	S	4169	CCTGGGCAGGATTAATAGGAGTGCGTGGCTGGGATGTTGGAGGTAGCCAG				6qB1	Mus musculus DENN/MADD domain containing 2A (Dennd2a), mRNA.				mKIAA1277; C130031G22; B930096L08Rik	mKIAA1277; C130031G22; B930096L08Rik
Mus musculus	RefSeq	ILMN_239258	ILMN_239258	CERKL	NM_001048176.1	NM_001048176.1		228094	114326540	NM_001048176.1	Cerkl	NP_001041641.1	ILMN_2905465	004810280	S	1488	ACAGCCCACAGGAGGAGGGTGGAAACCATACAACTGCTTCAGAACACGGG	2	-	79173691-79173740	2qC3	Mus musculus ceramide kinase-like (Cerkl), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Gm1958; Rp26	Gm1958; Rp26
Mus musculus	RefSeq	ILMN_214960	ILMN_214960	KATNAL2	NM_027721.2	NM_027721.2		71206	142349930	NM_027721.2	Katnal2	NP_081997.1	ILMN_1218162	003060750	S	1503	CATTCATAATCTAGACCTGGGCCCACCTCCTTACACACTTGGAAGACTTG	18	-	77232059-77232108	18qE3	Mus musculus katanin p60 subunit A-like 2 (Katnal2), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP [goid 8568] [evidence IEA]	4933439B08Rik; 3110023G01Rik	4933439B08Rik; 3110023G01Rik
Mus musculus	RefSeq	ILMN_210972	ILMN_210972	PCDHB10	NM_053135.2	NM_053135.2		93881	113866005	NM_053135.2	Pcdhb10	NP_444365.1	ILMN_1213750	004670048	S	2315	GTTCTGCTCTTCGTTGGGATGAAGCTGTGCAAGAGGGCCAGGTCGCCTTC	18	+	37573642-37573691	18qB3	Mus musculus protocadherin beta 10 (Pcdhb10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbJ; Pcdhb5D	PcdhbJ; Pcdhb5D
Mus musculus	MEEBO	ILMN_185985	ILMN_185985	D10ERTD516E	scl37450.6_417				51765914	XM_125901	D10Ertd516e		ILMN_2431657	003610128	S	3	CTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACACATGT										
Mus musculus	RefSeq	ILMN_215250	ILMN_215250	HEY2	NM_013904.1	NM_013904.1		15214	7305158	NM_013904.1	Hey2	NP_038932.1	ILMN_2657210	005080468	S	1896	ACTGTGTGCCCACCAGAGGCTCATTGACACCAACTCAAAAACTCTTCAGT	10	-	30552751-30552800	10qA4	Mus musculus hairy/enhancer-of-split related with YRPW motif 2 (Hey2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the Notch signaling pathway [goid 45746] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IMP]	Herp1; CHF1; hesr2; Hrt2	Herp1; CHF1; hesr2; Hrt2
Mus musculus	RefSeq	ILMN_215250	ILMN_215250	HEY2	NM_013904.1	NM_013904.1		15214	7305158	NM_013904.1	Hey2	NP_038932.1	ILMN_2657207	004040181	S	1894	CCTACTGTGTGCCCACCAGAGGCTCATTGACACCAACTCAAAAACTCTTC	10	-	30552753-30552802	10qA4	Mus musculus hairy/enhancer-of-split related with YRPW motif 2 (Hey2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the Notch signaling pathway [goid 45746] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IMP]	Herp1; CHF1; hesr2; Hrt2	Herp1; CHF1; hesr2; Hrt2
Mus musculus	MEEBO	ILMN_218865	ILMN_218865	CNTNAP4	scl33308.26.1_5				31982590	NM_130457	Cntnap4		ILMN_2774764	001030767	S	4478	GGCCTGGTGTTCGCATCTTCAATGGCCAAAAGTCTATACATAAAGCCCCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211800	ILMN_211800	ST3GAL3	NM_009176.2	NM_009176.2		20441	31543704	NM_009176.2	St3gal3	NP_033202.2	ILMN_2879848	006220372	S	2394	CCTGAACTGTCAGATGGTCTGGGTTTCTTGCTGGGACTGCCAGCTCCATG	4	-	117430191-117430240	4qD2.1	Mus musculus ST3 beta-galactoside alpha-2,3-sialyltransferase 3 (St3gal3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein [goid 8118] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]	Siat3; Siat6	Siat3; Siat6
Mus musculus	RefSeq	ILMN_216122	ILMN_216122	IFIT2	NM_008332.2	NM_008332.2		15958	31982841	NM_008332.2	Ifit2	NP_032358.1	ILMN_2981167	005270398	S	3313	GACAGAGTCAAGTGGCCCAGTATGAGACGGTCAGCCACACTCTGGGATAA	19	+	34650640-34650689	19qC1	Mus musculus interferon-induced protein with tetratricopeptide repeats 2 (Ifit2), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ifi54; AV302338	Ifi54; AV302338
Mus musculus	RefSeq	ILMN_216122	ILMN_216122	IFIT2	NM_008332.2	NM_008332.2		15958	31982841	NM_008332.2	Ifit2	NP_032358.1	ILMN_2981169	000360041	S	3240	ACACCACAAACTTGATAATTGCCATTTCCTAGGTAGATCTGGAAGGGCCT	19	+	34650567-34650616	19qC1	Mus musculus interferon-induced protein with tetratricopeptide repeats 2 (Ifit2), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ifi54; AV302338	Ifi54; AV302338
Mus musculus	RefSeq	ILMN_199090	ILMN_199090	LOC331318	XM_285614.1	XM_285614.1			28489184	XM_285614.1	LOC331318		ILMN_1254509	006760241	S	248	TCACTGAGAGGGCAACAGAAGAGATTGCTGGTGAGTTGGTCAAAGCTGCT										
Mus musculus	MEEBO	ILMN_193516	ILMN_193516	5730409K12RIK	scl6164.1.1_126						5730409K12Rik		ILMN_2497908	007610452	S	3	GGCCCACCTGCTTCACTCCGACTCTACCACTAGACAAGGGTTTTTCAGAA										
Mus musculus	RefSeq	ILMN_199856	ILMN_199856	LOC383088	XM_356863.1	XM_356863.1			38078241	XM_356863.1	LOC383088		ILMN_1227530	004120601	S	48	CACACAGACATTTTCCATTGACCGCAGGCAGCCACTTCTGTCTCTTCCTC										
Mus musculus	RefSeq	ILMN_199545	ILMN_199545	LOC383616	XM_357157.1	XM_357157.1			38074136	XM_357157.1	LOC383616		ILMN_2535603	001230239	S	925	ACGACCTCGTGCTCAGGAGACTCAGATGGAGCACCCTCAACGACCTCGTG										
Mus musculus	RefSeq	ILMN_201388	ILMN_201388	LOC385078	XM_358038.1	XM_358038.1			38093445	XM_358038.1	LOC385078		ILMN_2542125	000460343	S	82	CTGTATCGCTATTGGGCTCGATTCCTCTGCTTCTACAAAGAGCAGCCGCT										
Mus musculus	RefSeq	ILMN_199282	ILMN_249341	LOC667388	XR_002018.1	XR_002018.1		667388	94393056	XR_002018.1	LOC667388		ILMN_1217038	004250471	S	545	ACTTAGAGAGTTGGTATCCCCCAGCAGAGAACCAAGCTGAGGATGGGCTA	12	+	88639330-88639379	12qD3	PREDICTED: Mus musculus similar to GLE1 RNA export mediator-like (yeast (LOC667388), mRNA.					
Mus musculus	RefSeq	ILMN_198587	ILMN_315674	MAGEA10	NM_001085506.1	NM_001085506.1		236852	148238101	NM_001085506.1	Magea10	NP_001078975.1	ILMN_1216864	005220246	S	1227	GATCATTTCCAGTGTGGTATGCAGAGGCTTTGAGAGACGAGGAACAGCAG				XqA7.3	Mus musculus melanoma antigen family A, 10 (Magea10), mRNA.					
Mus musculus	RefSeq	ILMN_197926	ILMN_197926	LOC381034	XM_354943.1	XM_354943.1			38079698	XM_354943.1	LOC381034		ILMN_2529851	002450438	S	318	CCTGCCTCCTCCCAGGAAAGTATGTGATGGTGATGGGGGTGGTTCAGGCC										
Mus musculus	RefSeq	ILMN_198089	ILMN_198089	LOC243044	XM_144303.2	XM_144303.2			38081786	XM_144303.2	LOC243044		ILMN_1231414	000940360	S	73	CTGCTCTTCCCACACATGAAGCCATTGGTCTTGTTCATTTTGGGCGGGCC										
Mus musculus	RefSeq	ILMN_200761	ILMN_251693	VMN2R52	XM_891019.1	XM_891019.1		384534	82903128	XM_891019.1	Vmn2r52	XP_896112.1	ILMN_1245974	004490167	S	2044	TTCACAGGCCCAGGAAGAAGGTTGAGAAACATCTTGGTATCTGGGACTCC	7	-	10744466-10744515	7qA1	PREDICTED: Mus musculus vomeronasal receptor Vmn2r52, transcript variant 1 (Vmn2r52), mRNA.					
Mus musculus	RefSeq	ILMN_210793	ILMN_210793	OLFR1336	NM_146915.1	NM_146915.1		258917	22129060	NM_146915.1	Olfr1336	NP_667126.1	ILMN_2609242	001820315	S	883	TGCCTCAGGAACAGGGAGGTGCAATCAGCTTTCCACAGAACCATGCGCTG	7	+	6414104-6414153	7qA1	Mus musculus olfactory receptor 1336 (Olfr1336), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129212; MOR103-7	MGC129212; MOR103-7
Mus musculus	RefSeq	ILMN_196601	ILMN_196601	C730034F03RIK	NM_176900.4	NM_176900.4		319362	141803190	NM_176900.4	C730034F03Rik	NP_795874.1	ILMN_1224929	007610605	S	3179	CTGAGCAGTGGGAAAAGTTGACAAATCTCTGTGTCAGGAGTAGGCACTCC	15	+	89263132-89263181	15qE3	Mus musculus RIKEN cDNA C730034F03 gene (C730034F03Rik), mRNA.					
Mus musculus	Riken	ILMN_205796	ILMN_205796	6430553M21RIK	ri|6430553M21|PX00315B19|AK032464|1417					AK032464	6430553M21Rik		ILMN_2575287	000150682	S	1294	GTGGTGGCAGATACCTATAACTGCAGCATTGGAGAGGCGAATGAAGAGGG										
Mus musculus	MEEBO	ILMN_190052	ILMN_190052	ZFP512	scl27954.15_253				27370499	NM_172993	Zfp512		ILMN_2466772	004810500	S	2	GTCCCCTGTAAGGGTGGATATCTTGAAACGTGGGTTAGAGTAAGTAGCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	Riken	ILMN_202457	ILMN_202457	DKFZP434J1813	ri|4930571C17|PX00036J24|AK016269|1034					AK016269	DKFZp434J1813		ILMN_1243873	004850128	S	963	CGCATTGCCATGATTTAGCCCCCACTGTACGTATGTTTAATAACCCAGCC										
Mus musculus	RefSeq	ILMN_200892	ILMN_200892	LOC384635	XM_357757.1	XM_357757.1			38086877	XM_357757.1	LOC384635		ILMN_1213752	006770142	S	1186	GCTGGAGGGTTCCAGGAGCTCAGAGGGAATGGTTCAGACAGCAGTGAATG										
Mus musculus	RefSeq	ILMN_223758	ILMN_223758	AMH	NM_007445.2	NM_007445.2		11705	85861193	NM_007445.2	Amh	NP_031471.2	ILMN_2768691	001690095	S	1479	TAATCCGCGCTACGGGAACCACGTGGTGCTGCTGCTAAAAATGCAGGCTC	10	+	80270207-80270256	10qC1	Mus musculus anti-Mullerian hormone (Amh), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of the gonadal mesoderm over time, from its formation to the mature structure. The gonadal mesoderm is the middle layer of the three primary germ layers of the embryo which will go on to form the gonads of the organism [goid 7506] [evidence IEA]; The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones [goid 8406] [evidence IEA]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence ISO]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the transforming growth factor beta receptor [goid 5160] [evidence ISO]	MIS	MIS
Mus musculus	RefSeq	ILMN_198485	ILMN_322768	EG272350	NR_003622.1	NR_003622.1		272350	153792299	NR_003622.1	EG272350		ILMN_1246782	006400725	S	9162	TTCGTCCCCGACCAGCCATTCAGGATGGAGATTTTTTGCCAGCAACCGTG				7qA1	Mus musculus predicted gene, EG272350 (EG272350), non-coding RNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184233	ILMN_184233	4930442M18RIK	scl35074.1_644						4930442M18Rik		ILMN_2416954	002650376	S	11	GCCCGGGACTAATGTGCAGATCTAGGCTGTACTTGTGGAAGACATGAAGC										
Mus musculus	RefSeq	ILMN_214399	ILMN_214399	IGF1	NM_184052.2	NM_184052.2		16000	144227242	NM_184052.2	Igf1	NP_908941.1	ILMN_2647594	004490176	S	1269	CCTCAGTTTTGTGTTCACCTCGGCCTCATAGTACCCACTCTGACCTGCTG	10	+	87324043-87324092	10qC1	Mus musculus insulin-like growth factor 1 (Igf1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The chemical reactions and pathways resulting in the formation of chondroitin sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are chondroitin sulfate. Chondroitin sulfates are a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues; the repeat units consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate [goid 50650] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IC ]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of any steroid hormone receptor signaling pathway [goid 33143] [evidence ISO]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IDA]; The process that activates or increases the rate or extent of granule cell precursor proliferation [goid 21940] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of water within an organism or cell [goid 30104] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the insulin-like growth factor receptor [goid 5159] [evidence IPI]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Igf-I; C730016P09Rik; Igf-1	Igf-I; C730016P09Rik; Igf-1
Mus musculus	MEEBO	ILMN_219819	ILMN_219819	FOXM1	scl0014235.2_318	NM_008021.2			31542820	NM_008021.2	Foxm1		ILMN_2731974	002480709	S	3050	GTGTTTCTCTGATAGTGTTCCCAATCATGCCAGGGAGTCTACCACTGAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]		
Mus musculus	RefSeq	ILMN_212006	ILMN_232669	ABCC4	NM_001033336.2	NM_001033336.2		239273	142358785	NM_001033336.2	Abcc4	NP_001028508.1	ILMN_2621708	004880193	S	5030	CACAAGCCACGCTTTCTAAAGCCCATCCAGATTAGTTTAGCTCTGACCAC	14	-	118882549-118882598	14qE4	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 4 (Abcc4), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The lipid bilayer surrounding the platelet dense granule [goid 31088] [evidence ISO]	The directed movement of drugs into, out of, within or between cells [goid 6855] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 15559] [evidence TAS]	MOATB; D630049P08Rik; MRP4; MOAT-B	MOATB; D630049P08Rik; MRP4; MOAT-B
Mus musculus	RefSeq	ILMN_197336	ILMN_225309	GM1006	NM_001034875.2	NM_001034875.2		381399	118131066	NM_001034875.2	Gm1006	NP_001030047.1	ILMN_1250372	002070215	S	1008	CGACGCCAAGCTGGATAAGACCAGCCTCAACCTCAGAACCTCAAACGTGG	2	+	153782916-153782933:153783455-153783486	2qH1	Mus musculus gene model 1006, (NCBI) (Gm1006), mRNA.				RP23-2L1.1	RP23-2L1.1
Mus musculus	RefSeq	ILMN_225309	ILMN_225309	GM1006	NM_001034875.2	NM_001034875.2		381399	118131066	NM_001034875.2	Gm1006	NP_001030047.1	ILMN_2781850	004730433	S	1404	GTCCAACAATGCCATGCTCAGGACAGCCTGGGGACTGAGGTCTTGTGCTT	2	+	153789513-153789562	2qH1	Mus musculus gene model 1006, (NCBI) (Gm1006), mRNA.				RP23-2L1.1	RP23-2L1.1
Mus musculus	Riken	ILMN_203049	ILMN_203049	A430105C13RIK	ri|A430105C13|PX00064P16|AK040524|1610					AK040524	A430105C13Rik		ILMN_1227513	001580609	S	1370	CTCTCAGAGCGAGCCCCCACCCCCTGTACCAAAAGTCTTGACTTAATTCC										
Mus musculus	RefSeq	ILMN_211331	ILMN_211331	RAB1B	NM_029576.3	NM_029576.3		76308	146141140	NM_029576.3	Rab1b	NP_083852.1	ILMN_2614713	002000136	S	1763	TTGGGGGAAGATGGAAAAGGATGAAAAAATAAATTTCCACTGGCCCTTGG				19qA	Mus musculus RAB1B, member RAS oncogene family (Rab1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	1110011F09Rik	1110011F09Rik
Mus musculus	RefSeq	ILMN_220393	ILMN_319859	TTLL9	NM_001083618.1	NM_001083618.1		74711	134288893	NM_001083618.1	Ttll9	NP_001077087.1	ILMN_2721452	001240482	S	1185	GAACTCAAGACCTGTCTGCTGGAGGATACCCTGCACGTGGTGGACATGGA	2	+	152828038-152828087	2qH1	Mus musculus tubulin tyrosine ligase-like family, member 9 (Ttll9), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	AW046572; 1700016F23Rik; 4930509O20Rik	AW046572; 1700016F23Rik; 4930509O20Rik
Mus musculus	RefSeq	ILMN_202361	ILMN_228336	4930465A12RIK	XM_897643.2	XM_897643.2		74989	94372497	XM_897643.2	4930465A12Rik	XP_902736.1	ILMN_2549022	002350707	S	326	GGGAACCGCAACCCCTTCCCCTCGACATCTTGCCAGCAGCACTGGATTAA	4	-	127812036-127812085	4qD2.2	PREDICTED: Mus musculus RIKEN cDNA 4930465A12 gene (4930465A12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_252979	ILMN_252979	MAPKAPK3	NM_178907.1	NM_178907.1		102626	31542088	NM_178907.1	Mapkapk3	NP_849238.1	ILMN_2909346	007040161	S	2528	TGCTGAGCCGTGCTTACAAGGTCTGGTCCTGGCTTTAGCAGAATTGGAGC	9	-	107113266-107113315	9qF1	Mus musculus mitogen-activated protein kinase-activated protein kinase 3 (Mapkapk3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MAPKAP3; 3PK; AI874665; MK3; MapkKapk3	MAPKAP3; 3PK; AI874665; MK3; MapkKapk3
Mus musculus	RefSeq	ILMN_215415	ILMN_239827	PRSS36	NM_001081374.1	NM_001081374.1		77613	124487022	NM_001081374.1	Prss36	NP_001074843.1	ILMN_1228060	001570326	S	2700	GGATATCGCAAACCGTGGGAGAAGCCCATTTTCTTCATCTCGGTGGCTCC	7	-	135076463-135076512	7qF3	Mus musculus protease, serine, 36 (Prss36), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence ISA]	C330007D15Rik	C330007D15Rik
Mus musculus	MEEBO	ILMN_222793	ILMN_222793	2410004P03RIK	scl42600.5.1_65	XM_126830.3			38049295	XM_126830.3	2410004P03Rik		ILMN_1246580	004540176	S	2525	GGCACGGCGTGACCTTTAGGCCTCTTCCTGTACTAGAAATGATGAGGCAG										
Mus musculus	RefSeq	ILMN_213895	ILMN_213895	BAIAP2L2	NM_177580.3	NM_177580.3		207495	119637819	NM_177580.3	Baiap2l2	NP_808248.1	ILMN_1215537	000070458	S	1679	CTCATCCGCTGAGGCAAAGCCCTCCGCCGGGGCCTGAGGTGGCCCAGTAC	15	-	79088968-79089006:79089007-79089017	15qE1	Mus musculus BAI1-associated protein 2-like 2 (Baiap2l2), mRNA.		The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]		BC048937; MGC56984	BC048937; MGC56984
Mus musculus	RefSeq	ILMN_201342	ILMN_213491	ANKRD36	NM_023816.2	NM_023816.2		76389	125628651	NM_023816.2	Ankrd36	NP_076305.2	ILMN_1236644	006840553	S	4260	GCTCCACTTGAAAAGCTGGGTGCGGGAGAGCGAGATCCAAGCAAGAGATC	11	+	5587452-5587485:5589143-5589158	11qA1	Mus musculus ankyrin repeat domain 36 (Ankrd36), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1700012M14Rik; Ankrd48; RP23-387E5.1; 1700008J08Rik	1700012M14Rik; Ankrd48; RP23-387E5.1; 1700008J08Rik
Mus musculus	RefSeq	ILMN_213491	ILMN_213491	ANKRD36	NM_023816.2	NM_023816.2		76389	125628651	NM_023816.2	Ankrd36	NP_076305.2	ILMN_2830257	007400246	S	3467	TGTGTATAAAAGACGCAAAGGGCAGTGAGAAGGAAGCATGGAGCCCCCGC	11	+	5543697-5543746	11qA1	Mus musculus ankyrin repeat domain 36 (Ankrd36), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1700012M14Rik; Ankrd48; RP23-387E5.1; 1700008J08Rik	1700012M14Rik; Ankrd48; RP23-387E5.1; 1700008J08Rik
Mus musculus	MEEBO	ILMN_223895	ILMN_223895	CCL7	scl41159.3.1_10				42476054	NM_013654	Ccl7		ILMN_2771176	000430131	S	280	GGAAGTCTGCGCTGAAGCCCATCAGAAGTGGGTCGAGGAGGCTATAGCAT						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185550	ILMN_225164	TFDP2	NM_178667.3	NM_178667.3		211586	142369689	NM_178667.3	Tfdp2	NP_848782.1	ILMN_1238094	003130040	S	1267	GGAGTCAGGCAAATGCTCTCTGGAGGATCTGAAAATCGCAAAATCCCTGG	9	+	96211028-96211077	9qE3.3	Mus musculus transcription factor Dp 2 (Tfdp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	A330080J22Rik; DP3; DP-3	A330080J22Rik; DP3; DP-3
Mus musculus	RefSeq	ILMN_185550	ILMN_225164	TFDP2	NM_178667.3	NM_178667.3		211586	142369689	NM_178667.3	Tfdp2	NP_848782.1	ILMN_2760211	002480154	S	2311	GCCAGCACTGCCTTTTGCCAGCATTCTAAATTTGGAGTTTTACTGAGAAG	9	+	96219065-96219114	9qE3.3	Mus musculus transcription factor Dp 2 (Tfdp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	A330080J22Rik; DP3; DP-3	A330080J22Rik; DP3; DP-3
Mus musculus	MEEBO	ILMN_223950	ILMN_223950	1110032A04RIK	scl22074.4_257				19526829	NM_133675	1110032A04Rik		ILMN_2772120	007570605	S	1566	GGAGAGAAATCTTCCAAGTAGACATCCAAAGAAAGATATTTGGCACGCAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_229886	ILMN_229886	RPS10	NM_025963.1	NM_025963.1		67097	13399309	NM_025963.1	Rps10	NP_080239.1	ILMN_2897617	000150692	S	361	AGGTCCAGAGGGTGAGCGACCTGCAAGATTCACAAGAGGGGAGGCTGACA	17	-	27359896-27359945	17qA3.3	Mus musculus ribosomal protein S10 (Rps10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		2210402A09Rik; MGC107635	2210402A09Rik; MGC107635
Mus musculus	RefSeq	ILMN_222758	ILMN_261758	DAND5	NM_201227.2	NM_201227.2		23863	55742721	NM_201227.2	Dand5	NP_957679.1	ILMN_2754305	003840754	S	394	GCCCTTGGCTCCTCAAGAAGTGCTTCAGGAGACTTGTAAAGCTCTGTCCT	8	-	87346279-87346328	8qC3	Mus musculus DAN domain family, member 5 (Dand5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IGI]; Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IGI]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	coco; MGC144571; Dte; MGC144570; Cerl-2	coco; MGC144571; Dte; MGC144570; Cerl-2
Mus musculus	RefSeq	ILMN_211301	ILMN_211301	KRT19	NM_008471.2	NM_008471.2		16669	55741635	NM_008471.2	Krt19	NP_032497.1	ILMN_2614462	001170706	S	938	AGATAAGCAAGACCGAAGTCACGGACCTTCGACGGACCCTCCAGGGCCTT	11	-	100002623-100002672	11qD	Mus musculus keratin 19 (Krt19), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EndoC; MGC25344; Krt1-19; AI663979; Krt-1.19; K19	EndoC; MGC25344; Krt1-19; AI663979; Krt-1.19; K19
Mus musculus	RefSeq	ILMN_210053	ILMN_210053	GSTO2	NM_026619.1	NM_026619.1		68214	21311856	NM_026619.1	Gsto2	NP_080895.1	ILMN_2938904	004810564	S	1016	GAATCACACCCCGATGCTGCGGCTCTGGATAGCCTCCATGAAGCAGGACC	19	+	47960515-47960564	19qD1	Mus musculus glutathione S-transferase omega 2 (Gsto2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]	4930425C18Rik; 1700020F09Rik	4930425C18Rik; 1700020F09Rik
Mus musculus	RefSeq	ILMN_210053	ILMN_210053	GSTO2	NM_026619.1	NM_026619.1		68214	21311856	NM_026619.1	Gsto2	NP_080895.1	ILMN_2601758	007650142	S	513	TACAGCATGAGGTTCTGCCCCTACTCGCACAGGGCACGCCTGGTTCTCAA	19	+	47946551-47946600	19qD1	Mus musculus glutathione S-transferase omega 2 (Gsto2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]	4930425C18Rik; 1700020F09Rik	4930425C18Rik; 1700020F09Rik
Mus musculus	MEEBO	ILMN_190211	ILMN_190211	A430054B03	scl30997.4.1_3						A430054B03		ILMN_2468139	006980008	S	6	TAGTGCAAAGATCTGATGGCTTCCTGGCAGAGTGGTGCTTCAGCTGGAAC										
Mus musculus	Riken	ILMN_202749	ILMN_202749	ADAM15	ri|9530077N22|PX00114M07|AK020649|1035					AK020649	Adam15		ILMN_2551988	003800661	S	714	CCCAGGGACGGTTGCTGCTGCTGAGGGAGCCATCCCCATGTTTCAGACAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185054	ILMN_185054	SAE1	NM_019748.1	NM_019748.1		56459	9790246	NM_019748.1	Sae1	NP_062722.1	ILMN_2982958	004810368	S	1382	GGAGAACTGAGAATAGACCTCTGTTGTTGACCCTTCCTCAGGCTGGAGCC	7	-	15486015-15486064	7qA2	Mus musculus SUMO1 activating enzyme subunit 1 (Sae1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]	2400010M20Rik; Uble1a; AW743391; AOS1; AL033372; HSPC140; Sua1; 2610044L12Rik; D7Ertd177e	2400010M20Rik; Uble1a; AW743391; AOS1; AL033372; HSPC140; Sua1; 2610044L12Rik; D7Ertd177e
Mus musculus	Riken	ILMN_206855	ILMN_206855	D630016K01RIK	ri|D630016K01|PX00196O12|AK085366|4049					AK085366	D630016K01Rik		ILMN_1243625	001190450	S	3827	GTGGCAGGAGTGGGCATCTTAGAGGAGAACTTACCTTCTGAGGTTGAGGG										
Mus musculus	RefSeq	ILMN_199148	ILMN_199148	LOC331752	XM_284930.2	XM_284930.2			38091460	XM_284930.2	LOC331752		ILMN_2534215	000510220	S	1242	GGTCTCTGCTGACATCTTTGGTGACAGCGTCTATGGAGACAAATCCTGCC										
Mus musculus	RefSeq	ILMN_213412	ILMN_213412	LASS2	NM_029789.1	NM_029789.1		76893	22095014	NM_029789.1	Lass2	NP_084065.1	ILMN_2893999	001300280	S	1849	GCTATGACAGCTGGTGTGGAGTAGAAGGGCAACTAGTTCTGTTATTTATT	3	+	95127322-95127371	3qF2.1	Mus musculus LAG1 homolog, ceramide synthase 2 (Lass2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]	0610013I17Rik; TRH3; AI225939	0610013I17Rik; TRH3; AI225939
Mus musculus	RefSeq	ILMN_213412	ILMN_213412	LASS2	NM_029789.1	NM_029789.1		76893	22095014	NM_029789.1	Lass2	NP_084065.1	ILMN_2893992	007000343	S	1595	CTTCAAGCCAGGGTTGTGCCTTACTGTCCCTTTTCTGGGCCTCATTCTGC	3	+	95127068-95127117	3qF2.1	Mus musculus LAG1 homolog, ceramide synthase 2 (Lass2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]	0610013I17Rik; TRH3; AI225939	0610013I17Rik; TRH3; AI225939
Mus musculus	RefSeq	ILMN_213412	ILMN_213412	LASS2	NM_029789.1	NM_029789.1		76893	22095014	NM_029789.1	Lass2	NP_084065.1	ILMN_2893993	004200327	S	1924	GCCACAACTACAGGTAGGACCTGATATTTCGGCGAGGGACCATTTCAGAC	3	+	95127397-95127446	3qF2.1	Mus musculus LAG1 homolog, ceramide synthase 2 (Lass2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]	0610013I17Rik; TRH3; AI225939	0610013I17Rik; TRH3; AI225939
Mus musculus	RefSeq	ILMN_209315	ILMN_209315	LRRC48	NM_029044.2	NM_029044.2		74665	142379069	NM_029044.2	Lrrc48	NP_083320.1	ILMN_2765593	006180743	S	1672	GGAACCGTAAGCGAGTGAAGGAGATCAATCAATTCGTCGACCACATGCAG	11	+	60207649-60207698	11qB2	Mus musculus leucine rich repeat containing 48 (Lrrc48), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-135F6.3; 4930449E07Rik	RP23-135F6.3; 4930449E07Rik
Mus musculus	RefSeq	ILMN_196191	ILMN_209315	LRRC48	NM_029044.2	NM_029044.2		74665	142379069	NM_029044.2	Lrrc48	NP_083320.1	ILMN_1251006	004880270	S	1721	CTGCATGTGGTCGACGAATTGATTGATCTCCTTCACTCGCTTACGGTTCC	11	+	60207698-60207740:60207741-60207747	11qB2	Mus musculus leucine rich repeat containing 48 (Lrrc48), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-135F6.3; 4930449E07Rik	RP23-135F6.3; 4930449E07Rik
Mus musculus	RefSeq	ILMN_209315	ILMN_209315	LRRC48	NM_029044.2	NM_029044.2		74665	142379069	NM_029044.2	Lrrc48	NP_083320.1	ILMN_2594644	004250427	S	1548	GCCGTTGGGGCATCACATGACATCCACCTCCTGAAGATTGACAACCGAGA	11	+	60207229-60207278	11qB2	Mus musculus leucine rich repeat containing 48 (Lrrc48), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-135F6.3; 4930449E07Rik	RP23-135F6.3; 4930449E07Rik
Mus musculus	RefSeq	ILMN_209968	ILMN_209968	OVGP1	NM_007696.2	NM_007696.2		12659	34328545	NM_007696.2	Ovgp1	NP_031722.1	ILMN_2601728	002480494	S	660	CATGGAAGTTGGGAAAAGTTTACAGGACACAATAGTCCTCTGTTCTCCCT	3	+	105782853-105782902	3qF2.2	Mus musculus oviductal glycoprotein 1 (Ovgp1), mRNA.		The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]	Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]	Chit5; AU016433; AU019448; OGP; MOGP; 120kDa; muc9	Chit5; AU016433; AU019448; OGP; MOGP; 120kDa; muc9
Mus musculus	RefSeq	ILMN_209968	ILMN_209968	OVGP1	NM_007696.2	NM_007696.2		12659	34328545	NM_007696.2	Ovgp1	NP_031722.1	ILMN_2600928	002970092	S	2149	CTGAGGTAGAAACGTACTCCCAAGATGGGTGAAATTGGTCTTCCAGCTCT	3	+	105789965-105789996:105789997-105790014	3qF2.2	Mus musculus oviductal glycoprotein 1 (Ovgp1), mRNA.		The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]	Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]	Chit5; AU016433; AU019448; OGP; MOGP; 120kDa; muc9	Chit5; AU016433; AU019448; OGP; MOGP; 120kDa; muc9
Mus musculus	RefSeq	ILMN_213641	ILMN_213641	ATAD1	NM_026487.3	NM_026487.3		67979	118129838	NM_026487.3	Atad1	NP_080763.2	ILMN_2639230	007150608	S	2160	CTTCTTTTTTCAAACCTCCAGTAGCCAGACTTCTGATTCAGGCACCTTGA	19	-	32747656-32747705	19qC1	Mus musculus ATPase family, AAA domain containing 1 (Atad1), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	AW107648; 4921525H23Rik	AW107648; 4921525H23Rik
Mus musculus	RefSeq	ILMN_197306	ILMN_197306	LOC380867	XM_358448.1	XM_358448.1			38075068	XM_358448.1	LOC380867		ILMN_2527658	000380072	S	489	GCCTAAGCTACAAGAGGTCCCGTCTCGAAACAACGCCACGTTTTCTGCTG										
Mus musculus	RefSeq	ILMN_212579	ILMN_258465	4930579F01RIK	XM_915516.3	XM_915516.3		67741	149251834	XM_915516.3	4930579F01Rik	XP_920609.2	ILMN_2628014	004490026	S	1456	TTAGCGAAGACTATTTCTATTTGTAGCTAGTTTTAATACTTATGGAATAA				3qG3	PREDICTED: Mus musculus RIKEN cDNA 4930579F01 gene (4930579F01Rik), mRNA.					
Mus musculus	MEEBO	ILMN_212168	ILMN_212168	ETS1	scl023871.7_2				6753781	NM_011808	Ets1		ILMN_1236290	005260278	S	906	ATCCTTCAACAGCCTGCAGCGGGTCCCCTCCTATGACAGCTTCGACTACG						Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214518	ILMN_214518	RAVER2	NM_183024.1	NM_183024.1		242570	33942105	NM_183024.1	Raver2	NP_898845.1	ILMN_3009400	005360441	S	3144	AGGGAGGCCGTGGACAGCGTGGGGCAGTTCTGAGCTAACAGGCTCTACCT	4	+	100824129-100824178	4qC6	Mus musculus ribonucleoprotein, PTB-binding 2 (Raver2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	RP23-336G7.1; A430091O22Rik	RP23-336G7.1; A430091O22Rik
Mus musculus	RefSeq	ILMN_201599	ILMN_248718	PLEKHG1	NM_001033253.2	NM_001033253.2		213783	141802743	NM_001033253.2	Plekhg1	NP_001028425.1	ILMN_1229061	004640370	S	4096	CAGGAAGTCTGACCCACAGACCCCGGACCCTGACTGTTCGGATAGCATCT	10	-	6382282-6382331	10qA1	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 1 (Plekhg1), mRNA. XM_896002 XM_905011 XM_919118 XM_919131 XM_919140 XM_919152 XM_919161				mKIAA1209; D10Ertd733e	mKIAA1209; D10Ertd733e
Mus musculus	RefSeq	ILMN_214023	ILMN_214023	SLC24A6	NM_133221.1	NM_133221.1		170756	18875375	NM_133221.1	Slc24a6	NP_573484.1	ILMN_2643377	003450102	S	2748	CTCACTCCCTGACTGCCTTCAGCTGTAATTAAGAGACTTGACTGTTGGGG	5	+	120983907-120983956	5qF	Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 6 (Slc24a6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	NCKX6; AF261233	NCKX6; AF261233
Mus musculus	RefSeq	ILMN_212539	ILMN_212539	CAPN5	NM_007602.3	NM_007602.3		12337	118131211	NM_007602.3	Capn5	NP_031628.1	ILMN_2627566	007210022	S	4248	GCACCCAGGAGGCCTTGTAGTCTTCCAATTGCAGGAGATCAGCCCTACAG	7	-	105270188-105270237	7qE2	Mus musculus calpain 5 (Capn5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_246094	ILMN_246094	OLFR1110	NM_146769.1	NM_146769.1		258765	22129312	NM_146769.1	Olfr1110	NP_666980.1	ILMN_2821582	007210594	S	889	GTGAAGGAGGCAGCAAAAAGGTTGATTTGTAGGGAGAGCAGTACCTCATG	2	-	86975538-86975587	2qD	Mus musculus olfactory receptor 1110 (Olfr1110), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR172-4	MOR172-4
Mus musculus	Riken	ILMN_202883	ILMN_202883	A130093I21RIK	ri|A130093I21|PX00126M15|AK038291|772					AK038291	A130093I21Rik		ILMN_2553041	004290240	S	551	TCAGTGAGTGGGACAGCTTGGTACAGACAGCAGAAGGCAGAGGCTCCCAG										
Mus musculus	RefSeq	ILMN_219396	ILMN_219396	MGAT2	NM_146035.2	NM_146035.2		217664	148539886	NM_146035.2	Mgat2	NP_666147.1	ILMN_2708279	001660392	S	1852	GCAAAAGTGACAGTCTTCTATTTTTTATATTTGTCTCAATGGGATATACA				12qC2	Mus musculus mannoside acetylglucosaminyltransferase 2 (Mgat2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IEA]	The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [evidence IEA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R [goid 8455] [evidence IMP]	AA407964; GNT-II; CDGS2; GLCNACTII; GNT2; MGC37173	AA407964; GNT-II; CDGS2; GLCNACTII; GNT2; MGC37173
Mus musculus	RefSeq	ILMN_209640	ILMN_209640	HTR3B	NM_020274.3	NM_020274.3		57014	142384615	NM_020274.3	Htr3b	NP_064670.1	ILMN_1223402	006420343	S	1012	CAAGACCAATGTGCTGGTGGGCTATACGGTCTTCAGGGTCAACATGTCTG	9	-	48745192-48745241	9qA5.3	Mus musculus 5-hydroxytryptamine (serotonin) receptor 3B (Htr3b), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of a serotonin receptor binding to one of its physiological ligands [goid 7210] [evidence IDA]; The series of molecular signals generated as a consequence of a serotonin receptor binding to one of its physiological ligands [goid 7210] [evidence ISS]	Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence IDA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISS];  [goid 5232] [evidence IDA];  [goid 5232] [evidence ISS]	5-HT3B	5-HT3B
Mus musculus	RefSeq	ILMN_209640	ILMN_209640	HTR3B	NM_020274.3	NM_020274.3		57014	142384615	NM_020274.3	Htr3b	NP_064670.1	ILMN_1227196	006940427	S	1642	GTGACTACAGAGACAAGTATCTTATTGGCTATTGACCAAACCAGTAAACC	9	-	48743832-48743881	9qA5.3	Mus musculus 5-hydroxytryptamine (serotonin) receptor 3B (Htr3b), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of a serotonin receptor binding to one of its physiological ligands [goid 7210] [evidence IDA]; The series of molecular signals generated as a consequence of a serotonin receptor binding to one of its physiological ligands [goid 7210] [evidence ISS]	Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence IDA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISS];  [goid 5232] [evidence IDA];  [goid 5232] [evidence ISS]	5-HT3B	5-HT3B
Mus musculus	MEEBO	ILMN_186732	ILMN_186732	TRAPPC2	scl066226.5_53				13384831	NM_025432	Trappc2		ILMN_1235440	003460612	S	1	CGGTGGACAAATTTAATGAGTGGTTTGTATCAGCCTTTGTCACTGCAGGG						A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209463	ILMN_209463	PHOSPHO2	NM_028521.2	NM_028521.2		73373	142351352	NM_028521.2	Phospho2	NP_082797.1	ILMN_2596007	004150551	S	1908	GGCAAGTGCATGCTTGAACCCTATTGTGATGAGCGTCAAGTTGGTGGAGA	2	+	69635029-69635078	2qC2	Mus musculus phosphatase, orphan 2 (Phospho2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: pyridoxal 5'-phosphate + H2O = pyridoxal + phosphate [goid 33883] [evidence IEA]	Phos2; AU021728; 1700048E23Rik; AV006103; AI661517; RP23-174C9.6	Phos2; AU021728; 1700048E23Rik; AV006103; AI661517; RP23-174C9.6
Mus musculus	RefSeq	ILMN_210741	ILMN_210741	DGKZ	NM_138306.1	NM_138306.1		104418	30794243	NM_138306.1	Dgkz	NP_612179.1	ILMN_2915060	001110497	S	3267	AAAGCCACCTGATCCTTTGGGCTCTCTGGAGGGTTCTGGGTACCTAACCC	2	-	91773192-91773241	2qE1	Mus musculus diacylglycerol kinase zeta (Dgkz), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]	mDGK[z]; E130307B02Rik	mDGK[z]; E130307B02Rik
Mus musculus	RefSeq	ILMN_210741	ILMN_210741	DGKZ	NM_138306.1	NM_138306.1		104418	30794243	NM_138306.1	Dgkz	NP_612179.1	ILMN_1239607	004070136	S	2996	ATCTCACTGCCACATTCCTGTCAGATGGCTATGGGGGGACCCTGCCACAG	2	-	91773463-91773512	2qE1	Mus musculus diacylglycerol kinase zeta (Dgkz), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]	mDGK[z]; E130307B02Rik	mDGK[z]; E130307B02Rik
Mus musculus	RefSeq	ILMN_210741	ILMN_210741	DGKZ	NM_138306.1	NM_138306.1		104418	30794243	NM_138306.1	Dgkz	NP_612179.1	ILMN_2915059	006590187	S	3339	GGGCATCCCAGAAACTCAAGAGCCTGCTGTATTCACTTGCCCGCTGCCCT	2	-	91773120-91773169	2qE1	Mus musculus diacylglycerol kinase zeta (Dgkz), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]	mDGK[z]; E130307B02Rik	mDGK[z]; E130307B02Rik
Mus musculus	RefSeq	ILMN_203359	ILMN_210741	DGKZ	NM_138306.1	NM_138306.1		104418	30794243	NM_138306.1	Dgkz	NP_612179.1	ILMN_1223815	003290474	S	1241	GAGAGAATCCAGCCAACCGTGCCATCACCCCCGCAAGCCAGAATCCTCAA	2	-	91779755-91779804	2qE1	Mus musculus diacylglycerol kinase zeta (Dgkz), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]	mDGK[z]; E130307B02Rik	mDGK[z]; E130307B02Rik
Mus musculus	RefSeq	ILMN_215183	ILMN_215183	NFKBIL1	NM_010909.1	NM_010909.1		18038	6754843	NM_010909.1	Nfkbil1	NP_035039.1	ILMN_2989469	006450440	S	1306	TAGACGGAAGGAAGCAAGGTCGTGGATGGGGATGGACAAGAAGGGGCAGC	17	-	34828341-34828390	17qB1	Mus musculus nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 (Nfkbil1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Def-7	Def-7
Mus musculus	Riken	ILMN_205306	ILMN_205306	4833442A19RIK	ri|4833442A19|PX00313P13|AK029468|1260					AK029468	4833442A19Rik		ILMN_1258645	002060647	S	835	GGGTCTCACTACATCACTGGGCTGGCCTGGGTCTCACTATATCACTCAGG										
Mus musculus	RefSeq	ILMN_192761	ILMN_233302	TMEM91	NM_177102.3	NM_177102.3		320208	142378229	NM_177102.3	Tmem91	NP_796076.1	ILMN_2739111	005560543	S	751	TGTACACAGTGGTGACGGAGAGGACCACATCGCCCAGAAACGAGTCAGCT	7	-	26454234-26454283	7qA3	Mus musculus transmembrane protein 91 (Tmem91), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A830041P22Rik	A830041P22Rik
Mus musculus	RefSeq	ILMN_220323	ILMN_224859	VWCE	XM_915264.2	XM_915264.2		71768	94406071	XM_915264.2	Vwce	XP_920357.1	ILMN_1227319	001710315	S	2745	GACTGTCCACTCTACCTCCAGCCATTCCAGGGACTCCTTTGTCACCTGTC				19qA	PREDICTED: Mus musculus von Willebrand factor C and EGF domains, transcript variant 4 (Vwce), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196724	ILMN_196724	HIST1H4K	NM_178211.1	NM_178211.1		319160	30061358	NM_178211.1	Hist1h4k	NP_835583.1	ILMN_1243654	003370452	S	45	CGCCAAGCGCCACCGCAAAGTGCTGCGCGATAACATCCAGGGCATCACCA	13	-	21842280-21842329	13qA3.1	Mus musculus histone cluster 1, H4k (Hist1h4k), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196724	ILMN_196724	HIST1H4K	NM_178211.1	NM_178211.1		319160	30061358	NM_178211.1	Hist1h4k	NP_835583.1	ILMN_2525570	003390431	S	47	CCAAGCGCCACCGCAAAGTGCTGCGCGATAACATCCAGGGCATCACCAAG	13	-	21842278-21842327	13qA3.1	Mus musculus histone cluster 1, H4k (Hist1h4k), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222885	ILMN_222885	9130218O11RIK	NM_177820.2	NM_177820.2		328561	31342933	NM_177820.2	9130218O11Rik	NP_808488.1	ILMN_2756223	003520278	S	1873	CTTAACGGGGTGGGATAAGGTCCTGAGATAACAATTCCTTCACTTTCTGG	15	-	77411447-77411496	15qE1	Mus musculus RIKEN cDNA 9130218O11 gene (9130218O11Rik), mRNA.					
Mus musculus	Riken	ILMN_206449	ILMN_206449	C230070D10RIK	ri|C230070D10|PX00176O01|AK082620|2848					AK082620	C230070D10Rik		ILMN_2580159	002710328	S	2177	GGATCTCCAAGCCTCCAGATAAGGGTCACTGGTGAGCCTTCCAATTCCGG										
Mus musculus	Riken	ILMN_205838	ILMN_205838	A730016J02RIK	ri|A730016J02|PX00149C22|AK042696|3074					AK042696	A730016J02Rik		ILMN_2575607	006480348	S	2188	CCTCCTTTAGTTCAGCCCTCTCAGGTTGTTGTAGTAAGTGTCTCCAATGG										
Mus musculus	RefSeq	ILMN_243527	ILMN_243527	H2-M10.6	NM_201611.1	NM_201611.1		399549	42475547	NM_201611.1	H2-M10.6	NP_963905.1	ILMN_2824087	000150685	S	1117	GCAGGCCTGGGAGATCTCCATCAGTGACTGACCTTTGGTTTCCAGTGAGT	17	+	36952219-36952268	17qB1	Mus musculus histocompatibility 2, M region locus 10.6 (H2-M10.6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	Riken	ILMN_202927	ILMN_202927	PRC1	ri|4732496M17|PX00052N21|AK029140|3144					AK029140	Prc1		ILMN_1215164	006770059	S	3012	CGCCAGCCCTAGACCAGGACTTTTTAAGCTTCTCCCTTGCATAGGACCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence ISO]			
Mus musculus	RefSeq	ILMN_201110	ILMN_201110	LOC382008	XM_358690.1	XM_358690.1			38089223	XM_358690.1	LOC382008		ILMN_1236843	004280044	S	624	TCTGCCCTGAGCTGTCTCCTGTGGATTTCCATATACAGGGCTCCGCAGCG										
Mus musculus	Riken	ILMN_206407	ILMN_206407	C130061D10RIK	ri|C130061D10|PX00171C19|AK081652|3496					AK081652	C130061D10Rik		ILMN_1233487	007380577	S	3068	ACCTGCAGAGTGCTCTGACCACTGGGACTGAGGAGAGAGTTGGACTCCCA										
Mus musculus	RefSeq	ILMN_215337	ILMN_215337	P4HA1	NM_011030.1	NM_011030.1		18451	33859595	NM_011030.1	P4ha1	NP_035160.1	ILMN_1234565	005870040	S	2879	CGGCCCTGCACTTGATGAATATGAAGGAATTCTTTACACGGGGCTCCGGC	10	+	58834965-58835014	10qB4	Mus musculus procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide (P4ha1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The posttranslational modification of peptidyl-proline to form 4-hydroxy-L-proline; catalyzed by procollagen-proline,2-oxoglutarate-4-dioxygenase [goid 18401] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2 [goid 4656] [evidence IDA]	AL022634; P4ha	AL022634; P4ha
Mus musculus	RefSeq	ILMN_222988	ILMN_222988	HDAC4	NM_207225.1	NM_207225.1		208727	46402200	NM_207225.1	Hdac4	NP_997108.1	ILMN_1219682	001240433	S	3534	TGTGGCAGATCACATGGAACACAGGACAGCGCGCAACACACGGGCACACA	1	-	93829687-93829736	1qD	Mus musculus histone deacetylase 4 (Hdac4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI047285; 4932408F19Rik	AI047285; 4932408F19Rik
Mus musculus	RefSeq	ILMN_190418	ILMN_256490	PEX3	NM_019961.2	NM_019961.2		56535	31982703	NM_019961.2	Pex3	NP_064345.1	ILMN_2738242	001340632	S	1183	CCCATAGTGAACGGGCAGATCCATTCAGTTTGCAGTGAGACACCTAGTCA	10	-	13244772-13244774:13247547-13247593	10qA2	Mus musculus peroxisomal biogenesis factor 3 (Pex3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]		2900010N04Rik; 1700014F15Rik; 2810027F19Rik	2900010N04Rik; 1700014F15Rik; 2810027F19Rik
Mus musculus	RefSeq	ILMN_256490	ILMN_256490	PEX3	NM_019961.2	NM_019961.2		56535	31982703	NM_019961.2	Pex3	NP_064345.1	ILMN_2801934	003870349	S	1801	CACACGTGCCAGAGGGCTTATCACCAAGGAATCAGTGCATTTGAACCCCT	10	-	13244154-13244203	10qA2	Mus musculus peroxisomal biogenesis factor 3 (Pex3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]		2900010N04Rik; 1700014F15Rik; 2810027F19Rik	2900010N04Rik; 1700014F15Rik; 2810027F19Rik
Mus musculus	RefSeq	ILMN_196708	ILMN_196708	LOC277046	XM_203583.2	XM_203583.2			38081109	XM_203583.2	LOC277046		ILMN_1218768	003310563	S	2778	CCTGGAGGGCATCATCCTGAGTGAGCAGCTGTTTATTGGGTATCACGGAA										
Mus musculus	Riken	ILMN_203751	ILMN_203751	PRSS16	ri|A130022O15|PX00121B08|AK037514|3145					AK037514	Prss16		ILMN_1227774	001090475	S	2997	GGGCTGCCCAATGCACCAGCCCCCTACAGCTTAGGAATTTGGCACATCCT						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198632	ILMN_198632	LOC213560	XM_141996.3	XM_141996.3			38086540	XM_141996.3	LOC213560		ILMN_1239879	004780669	S	478	ATTGTGAAGGGCCCCAGGGGGGACCTCAATCACATCAGTGTGGAGCTAAG										
Mus musculus	RefSeq	ILMN_185166	ILMN_256341	GSPT2	NM_008179.2	NM_008179.2		14853	58331155	NM_008179.2	Gspt2	NP_032205.2	ILMN_2671253	006940088	S	2237	TGTCACTCCTGAATGCATACTCCAGTTTCCTCCCTCTATAGCACTCTGCT	X	+	91883644-91883693	XqC3	Mus musculus G1 to S phase transition 2 (Gspt2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	MGC143749; MGC143748	MGC143749; MGC143748
Mus musculus	RefSeq	ILMN_216782	ILMN_216782	MORN4	NM_198108.2	NM_198108.2		226123	149999604	NM_198108.2	Morn4	NP_932776.1	ILMN_2675333	006590674	S	1366	CCTGACTCACTCCAGGGTGAAGGGCAGACCTATCCAGGCTTTCTGTGGAA				19qC3	Mus musculus MORN repeat containing 4 (Morn4), mRNA.					
Mus musculus	RefSeq	ILMN_199200	ILMN_231958	LOC544808	XM_618920.3	XM_618920.3		544808	94390825	XM_618920.3	LOC544808	XP_618920.1	ILMN_1232020	004760554	S	552	CGTCAGAACATCGGATCATCAGGCTCCTCCAGAATCGCCCTCCATTGCTC	11	-	94674324-94674373	11qD	PREDICTED: Mus musculus hypothetical LOC544808, transcript variant 1 (LOC544808), mRNA.					
Mus musculus	RefSeq	ILMN_206255	ILMN_312345	LOC100039496	XM_001472995.1	XM_001472995.1		100039496	149258952	XM_001472995.1	LOC100039496	XP_001473045.1	ILMN_1238200	004200647	S	783	TAGGGCCTGACCCAGGAGCTGTTCTACCGAGTGATGCTACCGCTTAGCCT	8	+	83404868-83404917	8qC2	PREDICTED: Mus musculus hypothetical protein LOC100039496 (LOC100039496), mRNA.					
Mus musculus	RefSeq	ILMN_217173	ILMN_217173	COL4A4	NM_007735.1	NM_007735.1		12829	34328044	NM_007735.1	Col4a4	NP_031761.1	ILMN_2679871	006450730	S	5348	TCAAAACATGCCAACATGCCAACCCGCATCAAGGCAGACATCCAGTGGAA	1	-	82449651-82449700	1qC5	Mus musculus procollagen, type IV, alpha 4 (Col4a4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IPI]	[a]4(IV); E130010M05Rik	[a]4(IV); E130010M05Rik
Mus musculus	RefSeq	ILMN_217173	ILMN_217173	COL4A4	NM_007735.1	NM_007735.1		12829	34328044	NM_007735.1	Col4a4	NP_031761.1	ILMN_2983387	000010538	S	5544	CTCTATGGATCAAGCAAACACTGTACATGTGGAGTTGCTCCCCCTTCTCC	1	-	82449455-82449504	1qC5	Mus musculus procollagen, type IV, alpha 4 (Col4a4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IPI]	[a]4(IV); E130010M05Rik	[a]4(IV); E130010M05Rik
Mus musculus	RefSeq	ILMN_200487	ILMN_200487	LOC381738	XM_355721.1	XM_355721.1			38082666	XM_355721.1	LOC381738		ILMN_2538938	004730711	S	1043	CCCTGGCTGCGGTTATTCCTTTCTTCAAGCAGAACCTCTGGGATGCGCTG										
Mus musculus	RefSeq	ILMN_186145	ILMN_257371	GPN3	NM_024216.1	NM_024216.1		68080	21312641	NM_024216.1	Gpn3	NP_077178.1	ILMN_2745005	004570743	S	1045	TGCGTCTGGGAAGCGTGCTGGGCTCTAGGCTGAGCCGCTGCGTGAGCAAG	5	+	122832419-122832468	5qF	Mus musculus GPN-loop GTPase 3 (Gpn3), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	D5Ertd708e; A930018B01Rik	D5Ertd708e; A930018B01Rik
Mus musculus	RefSeq	ILMN_189039	ILMN_225964	HHIP	NM_020259.3	NM_020259.3		15245	34328502	NM_020259.3	Hhip	NP_064655.3	ILMN_2684250	001410397	S	2745	GGCACATTTCTTCACATCTGCATACACACGCACAACCCCAAACTCGAGGT	8	-	82496018-82496067	8qC2	Mus musculus Hedgehog-interacting protein (Hhip), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IDA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hhip1; Hip; Hip1	Hhip1; Hip; Hip1
Mus musculus	RefSeq	ILMN_221503	ILMN_239687	CCNO	NM_001081062.1	NM_001081062.1		218630	124486693	NM_001081062.1	Ccno	NP_001074531.1	ILMN_2736471	002340039	S	1705	GACAGTCCCTGGTGCAACACAGGAAATGCTGGAATGCCTTTTGCGTATTG	13	+	113780815-113780864	13qD2.2	Mus musculus cyclin O (Ccno), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	Ccnu; E130318K11; Ung2; C86987	Ccnu; E130318K11; Ung2; C86987
Mus musculus	MEEBO	ILMN_217983	ILMN_217983	SLC27A1	scl33695.16.1_25	NM_011977.2			31982750	NM_011977.2	Slc27a1		ILMN_2690122	002940746	S	2462	TATTGTGCCTTAGGTTCATCCACGGTTCCCCTGTGGAGCAAGTGGGGGCC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215014	ILMN_215014	KIFAP3	NM_010629.1	NM_010629.1		16579	6754443	NM_010629.1	Kifap3	NP_034759.1	ILMN_2954858	001980148	S	3649	AACTTTAGGAGCCCACTGATCTAAGTGTACTAGTTACCTCAGTTCACACG	1	+	165753517-165753566	1qH2.2	Mus musculus kinesin-associated protein 3 (Kifap3), mRNA.	Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IEA]; A complex consisting of two distinct motor subunits that form a heterodimer complexed with a third non-motor accessory subunit, the kinesin associated protein or KAP; the KIF3 heterodimer interacts via its C-terminal portion with KAP, which is thought to regulate the binding of the motor to cargo membranes [goid 16939] [evidence IPI]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence TAS]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of calcium-dependent cell-cell adhesion [goid 46587] [evidence IMP]	Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence TAS]	SMAP; KAP3	SMAP; KAP3
Mus musculus	RefSeq	ILMN_198627	ILMN_233531	PRR19	NM_001081294.1	NM_001081294.1		623131	124486844	NM_001081294.1	Prr19	NP_001074763.1	ILMN_1216541	003710398	S	1156	GTCTCTCCTGGGTAGTAACTCAGAGCAGTCCAGAGGCTTGGTCCTTCCCC	7	+	26089015-26089064	7qA3	Mus musculus proline rich 19 (Prr19), mRNA.					
Mus musculus	RefSeq	ILMN_233531	ILMN_233531	PRR19	NM_001081294.1	NM_001081294.1		623131	124486844	NM_001081294.1	Prr19	NP_001074763.1	ILMN_2936933	000730440	S	635	CCTAGTGCAGGAGTCCAGAGACACCATCATAAGAACCTTACAGGGCTGCC	7	+	26088410-26088459	7qA3	Mus musculus proline rich 19 (Prr19), mRNA.					
Mus musculus	RefSeq	ILMN_259010	ILMN_259010	FEM1A	NM_010192.2	NM_010192.2		14154	31542805	NM_010192.2	Fem1a	NP_034322.2	ILMN_2807906	001230753	S	3974	ACAGCAGGATCAAAGAACAGATTCCTGCCAAGCCACCACAGGGCCCACCC	17	+	55894504-55894553	17qD	Mus musculus feminization 1 homolog a (C. elegans) (Fem1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		AW611390; MGC117925	AW611390; MGC117925
Mus musculus	RefSeq	ILMN_216895	ILMN_216895	OLFR31	NM_147027.1	NM_147027.1		18330	22203820	NM_147027.1	Olfr31	NP_667238.1	ILMN_2676583	000780068	S	713	CTACCTGCTCGTCTCACATGACTGTGGTAACCTTGTTTTATGGGGCTGCC	14	+	15161339-15161388	14qA2	Mus musculus olfactory receptor 31 (Olfr31), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123774; MOR274-1; MTPCR53; MGC123790	MGC123774; MOR274-1; MTPCR53; MGC123790
Mus musculus	RefSeq	ILMN_216734	ILMN_216734	ELA2A	NM_007919.2	NM_007919.2		13706	133892984	NM_007919.2	Ela2a	NP_031945.1	ILMN_2674620	003450347	S	762	CCCCCGCAAGCCATCCGTCTTCACCAGGGTCTCCAACTACATTGACTGGA	4	-	141373787-141373836	4qE1	Mus musculus elastase 2A (Ela2a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Ela-2; Ela2	Ela-2; Ela2
Mus musculus	RefSeq	ILMN_189852	ILMN_247686	4932441K18RIK	NM_178935.4	NM_178935.4		353170	146198693	NM_178935.4	4932441K18Rik	NP_849266.1	ILMN_1226041	002760136	S	303	GGGGATGAAGGCAGTGACTTTATTACAAAGAACAGAAATTTGGTGAGCTC				XqF4	Mus musculus RIKEN cDNA 4932441K18 gene (4932441K18Rik), mRNA.				Lrp; Fiat	Lrp; Fiat
Mus musculus	RefSeq	ILMN_213012	ILMN_213012	RTBDN	NM_144929.2	NM_144929.2		234542	46048290	NM_144929.2	Rtbdn	NP_659178.1	ILMN_2826826	007380372	S	1730	AGTCTTAGGGAAGAATGGAGACTAGCAACGCGGTACACAGGCCGACCCTG	8	+	87480324-87480373	8qC3	Mus musculus retbindin (Rtbdn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			A330096I21Rik; MGC38683; Rtbnd; MGC31644; MGC38855; BC022744	A330096I21Rik; MGC38683; Rtbnd; MGC31644; MGC38855; BC022744
Mus musculus	RefSeq	ILMN_213012	ILMN_213012	RTBDN	NM_144929.2	NM_144929.2		234542	46048290	NM_144929.2	Rtbdn	NP_659178.1	ILMN_2632620	001030477	S	1230	GCAGATTTTATTTGTGGCCCGACTTGGCTGCAGTCCTCTGGAGAGAGAGG	8	+	87478922-87478971	8qC3	Mus musculus retbindin (Rtbdn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			A330096I21Rik; MGC38683; Rtbnd; MGC31644; MGC38855; BC022744	A330096I21Rik; MGC38683; Rtbnd; MGC31644; MGC38855; BC022744
Mus musculus	RefSeq	ILMN_215424	ILMN_215424	CENPK	NM_021790.1	NM_021790.1		60411	11140826	NM_021790.1	Cenpk	NP_068562.1	ILMN_2659337	004860600	S	1037	TTGAGCTACTTCTGCGTTACGGAATTGCTTTGAGACATCCAGAAGATCCA	13	+	105039517-105039566	13qD1	Mus musculus centromere protein K (Cenpk), transcript variant 1, mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Solzt; Cenp-K; C530004N04Rik; BB232189; Solt; B130045K24Rik	Solzt; Cenp-K; C530004N04Rik; BB232189; Solt; B130045K24Rik
Mus musculus	MEEBO	ILMN_193705	ILMN_193705	MKIAA1090	scl0004163.1_467				37360237	AK129287	mKIAA1090		ILMN_2499646	000110289	S	12	GCGTGTTTCTGGTTCTTTGTTCTGGCATGTCTCAGATGTGAGTGTGGAAG										
Mus musculus	RefSeq	ILMN_206174	ILMN_311547	LOC100041522	XM_001473293.1	XM_001473293.1		100041522	149275210	XM_001473293.1	LOC100041522	XP_001473343.1	ILMN_1226622	002940575	S	3330	CATGCCAAGAGCCCCACCAAGAAAACTAAGCCAGAGGACTCCAGAGGGCC	Un|NT_166434.1	-	23669-23718		PREDICTED: Mus musculus similar to 4933409K07Rik protein (LOC100041522), mRNA.					
Mus musculus	RefSeq	ILMN_215505	ILMN_215505	UBXN11	NM_026257.2	NM_026257.2		67586	118129822	NM_026257.2	Ubxn11	NP_080533.1	ILMN_2766809	000380451	S	208	ATGGCCAAGACTCAGAAGAGAAGATCTCTCTGCCTTCCTGCTATGGAGGC	4	+	133665499-133665548	4qD3	Mus musculus UBX domain protein 11 (Ubxn11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]			D4Bwg1540e; 4930506L07Rik; Soc; Soci	D4Bwg1540e; 4930506L07Rik; Soc; Soci
Mus musculus	RefSeq	ILMN_219840	ILMN_219840	ELOVL2	NM_019423.1	NM_019423.1		54326	9507146	NM_019423.1	Elovl2	NP_062296.1	ILMN_2714222	006270768	S	3123	CACCATGCAGAGCTACGAAATCTGTGCTGAGAAAATGCCATCTGGAAAGA	13	-	41278405-41278454	13qA3.3	Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 (Elovl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [evidence IDA]	Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor) [goid 16747] [evidence IDA]	Ssc2; AI317360	Ssc2; AI317360
Mus musculus	MEEBO	ILMN_215803	ILMN_215803	OLFR514	scl30842.1.1_80				22129388	NM_146726	Olfr514		ILMN_2663769	006220376	S	429	GTGGTGTGCTCATGGGTCTTGGGTATCATGACAGCTACTGTGTCGGTCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212892	ILMN_212892	KLHL11	NM_172565.2	NM_172565.2		217194	141803034	NM_172565.2	Klhl11	NP_766153.1	ILMN_2631379	003520446	S	2100	GAAGGACCGCATCCGACAGATGCAAGAGATACATCGGCACGCCCTGAACA	11	-	100324212-100324261	11qD	Mus musculus kelch-like 11 (Drosophila) (Klhl11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC011167; RP23-392I3.12	BC011167; RP23-392I3.12
Mus musculus	RefSeq	ILMN_211486	ILMN_211486	NSFL1C	NM_198326.2	NM_198326.2		386649	118130836	NM_198326.2	Nsfl1c	NP_938085.1	ILMN_1254302	007610433	S	877	GAAGCAGAACCTACCACGAACATCCAAATCCGGCTTGCAGATGGCGGGAG	2	+	151335330-151335379	2qG3	Mus musculus NSFL1 (p97) cofactor (p47) (Nsfl1c), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC61403; Munc-18c; MGC86097; Stxbp3a; p47	MGC61403; Munc-18c; MGC86097; Stxbp3a; p47
Mus musculus	RefSeq	ILMN_225904	ILMN_225904	RPAIN	NM_027186.1	NM_027186.1		69723	58037172	NM_027186.1	Rpain	NP_081462.1	ILMN_2968807	004250338	S	845	GTGTACACTGTCCCCACACCCCTGTGTTCTCAGTCACCGGTGGAACAGAA	11	+	70788463-70788512	11qB4	Mus musculus RPA interacting protein (Rpain), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence ISO]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence ISO]; The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence ISO]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [evidence ISO]	RP23-83I13.5; 2400006N03Rik	RP23-83I13.5; 2400006N03Rik
Mus musculus	RefSeq	ILMN_221998	ILMN_225904	RPAIN	NM_027186.1	NM_027186.1		69723	58037172	NM_027186.1	Rpain	NP_081462.1	ILMN_1247991	006100736	S	792	CCTGACAGAGCAGAAGCTTCGAGCCTGTTTGGAAGAAAATGTGAATGAGC	11	+	70788410-70788459	11qB4	Mus musculus RPA interacting protein (Rpain), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence ISO]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence ISO]; The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence ISO]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [evidence ISO]	RP23-83I13.5; 2400006N03Rik	RP23-83I13.5; 2400006N03Rik
Mus musculus	RefSeq	ILMN_220673	ILMN_220673	GPR128	NM_172825.1	NM_172825.1		239853	27370235	NM_172825.1	Gpr128	NP_766413.1	ILMN_2725134	005960315	S	2423	GCCAATGCCTTCGATAACCCCGCTGAAACTGCGTGTAAGGATGTACAATA	16	-	56649788-56649837	16qC1.1	Mus musculus G protein-coupled receptor 128 (Gpr128), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	9130020O16Rik	9130020O16Rik
Mus musculus	MEEBO	ILMN_196070	ILMN_196070	TMSB4X	scl53580.4_29	NM_021278.1			10946577	NM_021278.1	Tmsb4x		ILMN_2521356	003130307	S	10	TTTAATTATTGGAATGCACAATTTTTTTAATATGCAAATAAAGTTTTAAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers [goid 42989] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211027	ILMN_211027	SFRS6	NM_026499.3	NM_026499.3		67996	142366948	NM_026499.3	Sfrs6	NP_080775.2	ILMN_2611728	002630445	S	3318	GAGTCCTGTTGGACGTGATAGTGTTTCTTGATCTGTATGCCACAGTGCCT	2	+	162762665-162762714	2qH2	Mus musculus splicing factor, arginine/serine-rich 6 (Sfrs6), mRNA.				AI314910; AW146126; 1210001E11Rik	AI314910; AW146126; 1210001E11Rik
Mus musculus	MEEBO	ILMN_214909	ILMN_214909	OLFR560	scl0259117.1_37	NM_147113.1			22128742	NM_147113.1	Olfr560		ILMN_1240724	002970128	S	593	TGCAGTTGGATTGACTGCCATGATCTCTACTGTTGGTGTGGACTCAGTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	MEEBO	ILMN_194082	ILMN_194082	D6ERTD365E	scl052265.1_127				40255286	NM_199143	D6Ertd365e		ILMN_1218927	004880021	S	4	GGCTTTGCAGATGACTTGTTACATGGATTTCTTTGCTTGAAAAACCACAA										
Mus musculus	RefSeq	ILMN_216035	ILMN_216035	RHAG	NM_011269.2	NM_011269.2		19743	118130207	NM_011269.2	Rhag	NP_035399.1	ILMN_2745513	001710142	S	1042	GGGGTTCATAACTTGCATGGCTTACCTGGAGTTTTTGGAGGCCTTGCCAG	17	+	40971621-40971670	17qB2	Mus musculus Rhesus blood group-associated A glycoprotein (Rhag), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC123379; Rh50A; MGC123380; CD241; MGC123378; Rh50	MGC123379; Rh50A; MGC123380; CD241; MGC123378; Rh50
Mus musculus	RefSeq	ILMN_216855	ILMN_241962	SSR4	NM_009279.2	NM_009279.2		20832	141802821	NM_009279.2	Ssr4	NP_033305.1	ILMN_1255237	000510349	S	688	CCAGGCCTGAGGCGAGCAACTTCAGCCGTCCATTGCTTCTTTCAATAAAC	X	+	71034183-71034232	XqA7.3	Mus musculus signal sequence receptor, delta (Ssr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Trap; AW743063; C78062	Trap; AW743063; C78062
Mus musculus	RefSeq	ILMN_208942	ILMN_208942	KCNK7	NM_010609.2	NM_010609.2		16530	51944954	NM_010609.2	Kcnk7	NP_034739.2	ILMN_1225334	005890367	S	430	TTGCTGCCTGTGTTCAGTCGCCCAGGTGACTGGGTAGCCATTCGCTGGCA	19	+	5704590-5704639	19qA	Mus musculus potassium channel, subfamily K, member 7 (Kcnk7), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence ISS]	Mlk3; Kcnk8; 2310014G03Rik; MGC129259; Kcnk6; Knot	Mlk3; Kcnk8; 2310014G03Rik; MGC129259; Kcnk6; Knot
Mus musculus	RefSeq	ILMN_196069	ILMN_196069	TRHR	NM_013696.2	NM_013696.2		22045	133987570	NM_013696.2	Trhr	NP_038724.1	ILMN_2521340	005890332	S	3800	GGTTTCCTTTCACCAGTTGTAGAAAGCTGTATGCTGACTCATCTCATTGC	15	+	44067282-44067331	15qB3.2	Mus musculus thyrotropin releasing hormone receptor (Trhr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4997] [evidence IEA]	MGC124381; MGC124380	MGC124381; MGC124380
Mus musculus	MEEBO	ILMN_213714	ILMN_213714	STMN1	scl016765.5_129				31560786	NM_019641	Stmn1		ILMN_1248132	003120392	S	711	TTTTTAAAGTGTTGGTCTTTCTAATGTAGCTATTTTTCTCGTTGCATCTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle [goid 7052] [evidence ISO]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The removal of tubulin heterodimers from one or both ends of a microtubule [goid 7019] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the movement of a cell [goid 51272] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule polymerization [goid 31115] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of tubulin, including microtubules [goid 15631] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210303	ILMN_210303	8430410A17RIK	NM_173737.2	NM_173737.2		232210	31343454	NM_173737.2	8430410A17Rik	NP_776098.1	ILMN_2604263	006330048	S	1060	GATCGATGGCTGAAGCAGGAGAAGGAGGATGAGCCCATGGCCAAGAAGCC	6	+	87886260-87886309	6qD1	Mus musculus RIKEN cDNA 8430410A17 gene (8430410A17Rik), mRNA.				C85376	C85376
Mus musculus	RefSeq	ILMN_212650	ILMN_212650	SNX15	NM_026912.1	NM_026912.1		69024	30794429	NM_026912.1	Snx15	NP_081188.1	ILMN_2894457	006860246	S	1196	TAACTGGATCAAGTATAAGAAAAGCAAAGACTTCTCAGCTCTGACCTGCC	19	-	6119699-6119748	19qA	Mus musculus sorting nexin 15 (Snx15), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E130013C21Rik; 1500032B08Rik	E130013C21Rik; 1500032B08Rik
Mus musculus	RefSeq	ILMN_212650	ILMN_212650	SNX15	NM_026912.1	NM_026912.1		69024	30794429	NM_026912.1	Snx15	NP_081188.1	ILMN_2894450	004290678	S	1295	TGTGAGTGGCATCTGGGCCCCTAACCTGTCAGTTCACCCATCTAGACCAG	19	-	6119600-6119649	19qA	Mus musculus sorting nexin 15 (Snx15), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E130013C21Rik; 1500032B08Rik	E130013C21Rik; 1500032B08Rik
Mus musculus	RefSeq	ILMN_212650	ILMN_212650	SNX15	NM_026912.1	NM_026912.1		69024	30794429	NM_026912.1	Snx15	NP_081188.1	ILMN_2740337	001410136	S	1487	GACTAGTGAAAATCTCATAAAATTTAAATACGTGTGAGTAAAACACATGC	19	-	6119408-6119457	19qA	Mus musculus sorting nexin 15 (Snx15), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E130013C21Rik; 1500032B08Rik	E130013C21Rik; 1500032B08Rik
Mus musculus	Riken	ILMN_203740	ILMN_203740	EPS15-RS	ri|9830168E22|PX00119B17|AK036728|3372					AK036728	Eps15-rs		ILMN_1245948	000160445	S	3108	TCACATCCTGGGCTGCATCTTAGCAGTTGGTGACAGTTTACAGGTGGTGG										
Mus musculus	RefSeq	ILMN_236251	ILMN_236251	OTTMUSG00000016790	NM_001025260.2	NM_001025260.2		547160	125347343	NM_001025260.2	OTTMUSG00000016790	NP_001020431.1	ILMN_3122897	005390113	A	257	AGACCACTGGCAGGAAGCGCATAGCTCCAGAGGATGTACGTCTGGTGGTA	X	+	10889316-10889365	XqA1.1	Mus musculus predicted gene, OTTMUSG00000016790 (OTTMUSG00000016790), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_236251	ILMN_236251	OTTMUSG00000016790	NM_001025260.2	NM_001025260.2		547160	125347343	NM_001025260.2	OTTMUSG00000016790	NP_001020431.1	ILMN_3047327	005560661	I	376	TGATGCCTGGGTCTCAAGAGTCTGGAGGTTCACCGCACCTTCGGCCTCAC	X	+	10889435-10889484	XqA1.1	Mus musculus predicted gene, OTTMUSG00000016790 (OTTMUSG00000016790), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_229131	ILMN_229131	2210009G21RIK	NM_028201.1	NM_028201.1		74243	84579817	NM_028201.1	2210009G21Rik	NP_082477.1	ILMN_3151129	004540039	A	1128	GCGACTCAGCTGCAATTACTGAACAATTAGCTACAGATCAGGGCGGCCCC	2	+	136759662-136759711	2qF3	Mus musculus RIKEN cDNA 2210009G21 gene (2210009G21Rik), transcript variant 3, mRNA.				2410004I22Rik; C85661	2410004I22Rik; C85661
Mus musculus	RefSeq	ILMN_229131	ILMN_229131	2210009G21RIK	NM_028201.1	NM_028201.1		74243	84579817	NM_028201.1	2210009G21Rik	NP_082477.1	ILMN_3072319	002810328	I	44	GCCGTCACCGGAAATCTTACGGGCAGACGTGTATTCTGTCTGTGCGCGCT	2	+	136582702-136582751	2qF3	Mus musculus RIKEN cDNA 2210009G21 gene (2210009G21Rik), transcript variant 3, mRNA.				2410004I22Rik; C85661	2410004I22Rik; C85661
Mus musculus	RefSeq	ILMN_209680	ILMN_229202	3110079O15RIK	XM_906193.2	XM_906193.2		73234	94364053	XM_906193.2	3110079O15Rik	XP_911286.2	ILMN_2598181	005080176	S	455	GTGGTGCTGGCACTCGTGGTCGTCGCGCTAAGGAAGTTTTCCGCTTCTTG				1qD	PREDICTED: Mus musculus RIKEN cDNA 3110079O15 gene (3110079O15Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215546	ILMN_215546	BCL10	NM_009740.1	NM_009740.1		12042	6753165	NM_009740.1	Bcl10	NP_033870.1	ILMN_2660851	007000563	S	1482	CGAGAGCGCTGACATGTGAAGCATGGTGAGCAGCGAGGGAACTGACAGGA	3	+	145596969-145597018	3qH2	Mus musculus B-cell leukemia/lymphoma 10 (Bcl10), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence ISA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IMP]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence ISO]; A defense response that is mediated by cells [goid 6968] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISA]; Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50856] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus [goid 9620] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence NAS]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISA]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CARMEN; cE10; C81403; BCL-10; CLAP; CIPER; ME10; AI132454	CARMEN; cE10; C81403; BCL-10; CLAP; CIPER; ME10; AI132454
Mus musculus	RefSeq	ILMN_195970	ILMN_195970	USP9Y	NM_148943.2	NM_148943.2		107868	120300979	NM_148943.2	Usp9y	NP_683745.2	ILMN_1241604	004880397	S	7968	CTGAACAGCCGTTTTCAGGTCCAGCATCACATCACTTGAATAACCCTCAG	Y	-	635480-635529	YqA1	Mus musculus ubiquitin specific peptidase 9, Y chromosome (Usp9y), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Dffry; Fafl2	Dffry; Fafl2
Mus musculus	RefSeq	ILMN_218169	ILMN_218169	PCDH8	NM_021543.2	NM_021543.2		18530	112181161	NM_021543.2	Pcdh8	NP_067518.2	ILMN_1236119	002350278	S	2620	CCAACATGTTCGACGTGCTCACCTTCCCTGGCAGCGGCAAAGCGCCCTTT	14	-	80168438-80168487	14qD3	Mus musculus protocadherin 8 (Pcdh8), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Papc; 1700080P15Rik	Papc; 1700080P15Rik
Mus musculus	Riken	ILMN_204916	ILMN_204916	NK-1R, SPR, GPCR	ri|C230003D10|PX00172N24|AK048680|2647					AK048680	NK-1R, SPR, GPCR		ILMN_1216267	006480717	S	2129	GTGTCTCGGGTCTATCACGCATGGTTTCTATGGACAGGGCTACCTCACTG										
Mus musculus	RefSeq	ILMN_209296	ILMN_209296	2610529C04RIK	NM_025952.2	NM_025952.2		67075	31981110	NM_025952.2	2610529C04Rik	NP_080228.2	ILMN_1232991	001010471	S	2192	CCTGGTCTTTTGTTTTTTAAAACACATGTTCGTAAAACATGGGGCTATTT	X	-	103165582-103165631	XqD	Mus musculus RIKEN cDNA 2610529C04 gene (2610529C04Rik), mRNA.				2410001C15Rik; IAG2	2410001C15Rik; IAG2
Mus musculus	RefSeq	ILMN_198588	ILMN_259745	ZFP36L3	NM_001009549.2	NM_001009549.2		333473	148539903	NM_001009549.2	Zfp36l3	NP_001009549.1	ILMN_1250130	001090390	S	2033	CACTGTGGGCAATACATCCTCGACTACTATCACTGCTGCCACCGCTGCAG				XqA5	Mus musculus zinc finger protein 36, C3H type-like 3 (Zfp36l3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps: poly(A) tail shortening, deadenylylation-dependent decapping, and decay of the transcript body, and that can regulate mRNA stability [goid 288] [evidence IDA]; Shortening of the poly(A) tail of a nuclear-transcribed mRNA from full length to an oligo(A) length [goid 289] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IDA]	AY661338	AY661338
Mus musculus	RefSeq	ILMN_197470	ILMN_255769	LOC433476	XM_917865.2	XM_917865.2		433476	94366902	XM_917865.2	LOC433476	XP_922958.1	ILMN_1243991	006520088	S	123	GGCCTCGGGAATGCTGGAGGCGAGCACCACCACAGGATCAACTTTGACAA					PREDICTED: Mus musculus similar to ribosomal protein L27a (LOC433476), mRNA.					
Mus musculus	RefSeq	ILMN_201494	ILMN_201494	LOC385256	XM_358153.1	XM_358153.1			38094649	XM_358153.1	LOC385256		ILMN_1233406	002650369	S	691	GGGGCTACTGCTGATGTTGAGCCAACTACTTCTTCCTCAGTGTGCTCCTG										
Mus musculus	RefSeq	ILMN_216859	ILMN_216859	SIRT2	NM_022432.3	NM_022432.3		64383	142364001	NM_022432.3	Sirt2	NP_071877.2	ILMN_2676181	006380154	S	1492	GAAGCAGCCTTCCCTAACTTCTAATTATTCCCAGACAACAGGCTACCCCA	7	+	29573344-29573393	7qA3	Mus musculus sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) (Sirt2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	5730427M03Rik; SIR2L2; Sir2l	5730427M03Rik; SIR2L2; Sir2l
Mus musculus	RefSeq	ILMN_184867	ILMN_225654	IL15	NM_008357.1	NM_008357.1		16168	6680406	NM_008357.1	Il15	NP_032383.1	ILMN_2610234	006940402	S	946	ACGTCCTGACTGCATGCGAGCCTCTTCCGTGTTTCTGTTATTAAGGTACC	8	-	84855771-84855812:84855813-84855820	8qC2	Mus musculus interleukin 15 (Il15), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of T cell selection that occurs in extrathymic locations, often resulting T cells of distinct specificities from those selected in the thymus [goid 45062] [evidence IMP]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IMP]; Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism [goid 50691] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IMP]; The expansion of a NK T cell population by cell division [goid 1866] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IMP];  [goid 5126] [evidence IEA]	AI503618	AI503618
Mus musculus	RefSeq	ILMN_184867	ILMN_225654	IL15	NM_008357.1	NM_008357.1		16168	6680406	NM_008357.1	Il15	NP_032383.1	ILMN_1219869	002690768	S	90	CCCAATTCTCTGCGCCCAAAAGACTTGCAGTGCATCTCCTTACGCGCTGC	8	-	84926305-84926354	8qC2	Mus musculus interleukin 15 (Il15), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of T cell selection that occurs in extrathymic locations, often resulting T cells of distinct specificities from those selected in the thymus [goid 45062] [evidence IMP]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IMP]; Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism [goid 50691] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IMP]; The expansion of a NK T cell population by cell division [goid 1866] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IMP];  [goid 5126] [evidence IEA]	AI503618	AI503618
Mus musculus	RefSeq	ILMN_225654	ILMN_225654	IL15	NM_008357.1	NM_008357.1		16168	6680406	NM_008357.1	Il15	NP_032383.1	ILMN_2938704	004480735	S	857	CTGGCTGCAAGGAATGTGAGGAGCTGGAGGAGAAAACCTTCACAGAGTTT	8	-	84855860-84855909	8qC2	Mus musculus interleukin 15 (Il15), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of T cell selection that occurs in extrathymic locations, often resulting T cells of distinct specificities from those selected in the thymus [goid 45062] [evidence IMP]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IMP]; Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism [goid 50691] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IMP]; The expansion of a NK T cell population by cell division [goid 1866] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IMP];  [goid 5126] [evidence IEA]	AI503618	AI503618
Mus musculus	RefSeq	ILMN_199331	ILMN_199331	LOC382196	XM_356304.1	XM_356304.1			38096299	XM_356304.1	LOC382196		ILMN_2534862	001240273	S	323	CTGCTGACAAGCAATGTATGAGCATGCTTGGGAAATGTAAGTACCATGAC										
Mus musculus	RefSeq	ILMN_224445	ILMN_224445	DEFB37	NM_181683.1	NM_181683.1		353320	32129202	NM_181683.1	Defb37	NP_859011.1	ILMN_2913432	001110592	S	163	AGCATGTATTGAGAATAAAGACACCTGTCGCCTCAAGAACTGCCCACGCC	8	-	18986372-18986421	8qA1.3	Mus musculus defensin beta 37 (Defb37), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	RefSeq	ILMN_199329	ILMN_314020	EG546524	XM_001480466.1	XM_001480466.1		546524	149262879	XM_001480466.1	EG546524	XP_001480516.1	ILMN_1220427	003130088	S	458	GATACCCAGTGCCCTCCGGCTGCGCCCACACCCGGGAAAAGTTTCTGGTC	12	+	19294874-19294923	12qA1.2	PREDICTED: Mus musculus predicted gene, EG546524 (EG546524), mRNA.					
Mus musculus	RefSeq	ILMN_197422	ILMN_243993	AU015228	NM_001033197.2	NM_001033197.2		99169	142359103	NM_001033197.2	AU015228	NP_001028369.1	ILMN_1239109	007400039	S	1262	CACCATGAAGATGAGGAAGACGAAGAGCTTGAGGAAGTAGCAGGTGACCC	2	+	129927391-129927440	2qF1	Mus musculus expressed sequence AU015228 (AU015228), mRNA.			Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192706	ILMN_235862	SMCHD1	NM_028887.3	NM_028887.3		74355	148839317	NM_028887.3	Smchd1	NP_083163.3	ILMN_1242619	004150612	S	6229	CTGGCAAGAATTTCCTGTTCCTCCAAATGGGCCTGGAAGCCATTGAAGCT				17qE1.3	Mus musculus SMC hinge domain containing 1 (Smchd1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4931400A14Rik; mKIAA0650; AW554188	4931400A14Rik; mKIAA0650; AW554188
Mus musculus	RefSeq	ILMN_192706	ILMN_235862	SMCHD1	NM_028887.3	NM_028887.3		74355	148839317	NM_028887.3	Smchd1	NP_083163.3	ILMN_2663704	000990131	S	2886	TAATCTGAAGGTTATTCTTCCTGGTTTAAAAGAAGACTCACAGATTTTGA				17qE1.3	Mus musculus SMC hinge domain containing 1 (Smchd1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4931400A14Rik; mKIAA0650; AW554188	4931400A14Rik; mKIAA0650; AW554188
Mus musculus	RefSeq	ILMN_192706	ILMN_235862	SMCHD1	NM_028887.3	NM_028887.3		74355	148839317	NM_028887.3	Smchd1	NP_083163.3	ILMN_2490558	000520722	S	6609	CACAGGTGTCTGGGAATTTAAATGTTCAGATACACAAAAACATTGGTGAG				17qE1.3	Mus musculus SMC hinge domain containing 1 (Smchd1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4931400A14Rik; mKIAA0650; AW554188	4931400A14Rik; mKIAA0650; AW554188
Mus musculus	RefSeq	ILMN_207007	ILMN_235862	SMCHD1	NM_028887.3	NM_028887.3		74355	148839317	NM_028887.3	Smchd1	NP_083163.3	ILMN_1230552	000160735	S	711	ACCTGCTGTCGCAGTGGTAGATAATGGAAGAGGAATGACCTCTAAGCAGC				17qE1.3	Mus musculus SMC hinge domain containing 1 (Smchd1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4931400A14Rik; mKIAA0650; AW554188	4931400A14Rik; mKIAA0650; AW554188
Mus musculus	RefSeq	ILMN_216580	ILMN_216580	RAB6	NM_024287.2	NM_024287.2		19346	31543570	NM_024287.2	Rab6	NP_077249.1	ILMN_2825339	001090279	S	3156	GCTGCTCCTGCTGCTCTTCGTATTTGGCTTGGAGTTCTTAAACTGAAACA	7	+	100515474-100515523	7qE3	Mus musculus RAB6, member RAS oncogene family (Rab6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine [goid 18125] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AA419671; 2610028L11Rik	AA419671; 2610028L11Rik
Mus musculus	RefSeq	ILMN_196719	ILMN_196719	KLRA18	NM_053153.2	NM_053153.2		93970	142356848	NM_053153.2	Klra18	NP_444383.1	ILMN_1251366	007320537	S	1046	GTCTGCAGTGCAAAGAGAGAGACACTCTGGAAGATTTTGGGAATGTTCTC					Mus musculus killer cell lectin-like receptor, subfamily A, member 18 (Klra18), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ly49r; MGC130549	Ly49r; MGC130549
Mus musculus	RefSeq	ILMN_197436	ILMN_316046	LOC100046804	XM_001476837.1	XM_001476837.1		100046804	149250426	XM_001476837.1	LOC100046804	XP_001476887.1	ILMN_1235264	001090554	S	4787	CCATCCGAAAGAGGAGTCTGGAAGGAATGAGGAAGCAGACACGGGTGGAG					PREDICTED: Mus musculus similar to likely orthologue of H. sapiens chromosome 20 open reading frame 174 (C20orf174) (LOC100046804), mRNA.					
Mus musculus	RefSeq	ILMN_248258	ILMN_248258	HYAL6	NM_028920.2	NM_028920.2		74409	125660447	NM_028920.2	Hyal6	NP_083196.2	ILMN_2966519	002190411	S	3119	CAGGGCTCAGACACTGAACTACTCCTAGTAAAGCAGGAAAGGCAGATATT	6	+	24695119-24695168	6qA3.1	Mus musculus hyaluronoglucosaminidase 6 (Hyal6), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196485	ILMN_248258	HYAL6	NM_028920.2	NM_028920.2		74409	125660447	NM_028920.2	Hyal6	NP_083196.2	ILMN_1242948	000990491	S	1579	GTGTGCCACTGTTACTATGGCTGGCATGGAGACTCCTGCAGATCTCACTC	6	+	24693579-24693628	6qA3.1	Mus musculus hyaluronoglucosaminidase 6 (Hyal6), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_202294	ILMN_248258	HYAL6	NM_028920.2	NM_028920.2		74409	125660447	NM_028920.2	Hyal6	NP_083196.2	ILMN_1227971	007160731	S	2112	CTGAGCACCTGGAAGGCAGAGATCCATTACAAATTCAAAGCCAGCTTGGC	6	+	24694112-24694161	6qA3.1	Mus musculus hyaluronoglucosaminidase 6 (Hyal6), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196409	ILMN_226034	A530050D06RIK	NM_001081169.1	NM_001081169.1		104816	124487182	NM_001081169.1	A530050D06Rik	NP_001074638.1	ILMN_2615380	001470397	S	2373	CTGCTAAGGGACCTCAGGCACGTGCCAGCCGATTGACCGGCTACTATGTT	12	+	113365425-113365474	12qF1	Mus musculus RIKEN cDNA A530050D06 gene (A530050D06Rik), mRNA.		The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: L-asparagine + H2O = L-aspartate + NH3 [goid 4067] [evidence ISO]; Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence ISO]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence ISO]	Gm690; AI429460	Gm690; AI429460
Mus musculus	MEEBO	ILMN_215628	ILMN_215628	A630090P18	scl00224111.2_302	NM_177633.2			46849818	NM_177633.2	A630090P18		ILMN_1223693	000430612	S	2958	GGTCCCTTTGCTTGTGGCTAAACTATACACATCATAGGGAGAGCCTATGC										
Mus musculus	RefSeq	ILMN_185710	ILMN_232515	MRVI1	NM_194464.2	NM_194464.2		17540	120431611	NM_194464.2	Mrvi1	NP_919446.2	ILMN_2746283	000610564	S	5527	CCCACTCAAGATGCCCCTGAAAGCTGGCATTTCTGCTTGAGCCTGAGGGT	7	-	118012039-118012088	7qF1	Mus musculus MRV integration site 1 (Mrvi1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]			BB115629; Irag; Ris1	BB115629; Irag; Ris1
Mus musculus	RefSeq	ILMN_217880	ILMN_217880	NDUFS7	NM_029272.3	NM_029272.3		75406	146141113	NM_029272.3	Ndufs7	NP_083548.1	ILMN_2688763	006290041	S	616	GCCGAAGCACTCCTTTATGGCATCTTGCAGCTGCAACGGAAGATCAAGCG				10qC1	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 7 (Ndufs7), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	1010001M04Rik	1010001M04Rik
Mus musculus	RefSeq	ILMN_214208	ILMN_246867	MSI2	NM_054043.3	NM_054043.3		76626	124286824	NM_054043.3	Msi2	NP_473384.1	ILMN_2687905	001570014	S	1231	GCAAGACTGGGCGAAGTTTCTGAGTGGCCCTTTGTTTAGGTGACGTCCTC	11	-	88157644-88157693	11qC	Mus musculus Musashi homolog 2 (Drosophila) (Msi2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with single-stranded RNA [goid 3727] [evidence IDA]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [evidence IDA]	AW489193; MGC130496; 1700105C15Rik; AI451722; Msi2h; MGC118040; AI563628	AW489193; MGC130496; 1700105C15Rik; AI451722; Msi2h; MGC118040; AI563628
Mus musculus	RefSeq	ILMN_214208	ILMN_246867	MSI2	NM_054043.3	NM_054043.3		76626	124286824	NM_054043.3	Msi2	NP_473384.1	ILMN_1220186	006650082	S	5610	GCTCAGCCCAGTCCTGGGCACAGACACTACACAAGGCAATGCTGGAATTG	11	-	88153265-88153314	11qC	Mus musculus Musashi homolog 2 (Drosophila) (Msi2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with single-stranded RNA [goid 3727] [evidence IDA]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [evidence IDA]	AW489193; MGC130496; 1700105C15Rik; AI451722; Msi2h; MGC118040; AI563628	AW489193; MGC130496; 1700105C15Rik; AI451722; Msi2h; MGC118040; AI563628
Mus musculus	Riken	ILMN_202613	ILMN_202613	E430025L11RIK	ri|E430025L11|PX00100A06|AK088771|1509					AK088771	E430025L11Rik		ILMN_2550945	004040112	S	1176	GGCATGTCAGGGGCTGAGAGCCCTTCCTCTGCAGGGCATGTAAAATGACC										
Mus musculus	Riken	ILMN_202480	ILMN_202480	6330566F14RIK	ri|6330566F14|PX00044K09|AK018243|1273					AK018243	6330566F14Rik		ILMN_1259289	003170286	S	492	GCTCAGGTGGACGGCTTTGCTTCATCTGCCTGCACCACATGGACCTCTGA										
Mus musculus	Riken	ILMN_204240	ILMN_204240	A830062E06RIK	ri|A830062E06|PX00156C19|AK043977|1752					AK043977	A830062E06Rik		ILMN_2563464	006040646	S	302	GGAGCTGCGGCTGCAGGAGGAGAGCGTGAAGCAGCACCAGATCAACATCT										
Mus musculus	RefSeq	ILMN_212887	ILMN_257064	FDX1L	NM_001039824.2	NM_001039824.2		68165	142378689	NM_001039824.2	Fdx1l	NP_001034913.1	ILMN_2631342	000430520	S	717	CCAGGGAGAATCGAACTATAAATTAAGGATGGACTCTAACCAGAGCTGCA	9	-	20871979-20872028	9qA3	Mus musculus ferredoxin 1-like (Fdx1l), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212775	ILMN_212775	SDC1	NM_011519.2	NM_011519.2		20969	133892957	NM_011519.2	Sdc1	NP_035649.1	ILMN_1228718	005810767	S	2707	GGTTTAAGTAATTGGGACTCTAGCACATCTTGACCTAGGGTCACTAGAGC	12	+	8800144-8800193	12qA1.1	Mus musculus syndecan 1 (Sdc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	Synd; AA409076; AA408134; CD138; syn-1; Synd1	Synd; AA409076; AA408134; CD138; syn-1; Synd1
Mus musculus	RefSeq	ILMN_199474	ILMN_199474	LOC383538	XM_357111.1	XM_357111.1			38050358	XM_357111.1	LOC383538		ILMN_2535339	005870431	S	123	CTCTGAGATACGAGTCACCATCGTCCCAGCCCTCACTGTTCTTAACCAGA										
Mus musculus	MEEBO	ILMN_210478	ILMN_210478	2500002L14RIK	scl0001255.1_2	NM_025607.2			40254517	NM_025607.2	2500002L14Rik		ILMN_2606015	004280445	S	1492	TGCCCTCTGTGCCGCCATGAGCTGCCCACTGATGATGACAGCTATGAAGA										
Mus musculus	RefSeq	ILMN_192514	ILMN_228294	B3GALT6	NM_080445.4	NM_080445.4		117592	148352320	NM_080445.4	B3galt6	NP_536693.1	ILMN_2687140	005700754	S	2016	GGGTGTGTGAGCGTATGGACTGTAAGGCACTTGGGATCAGAATGTCCACA				4qE2	Mus musculus UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6 (B3galt6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The middle Golgi cisterna (or cisternae) [goid 5797] [evidence IDA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: 4-beta-D-galactosyl-O-beta-D-xylosylprotein + UDP-galactose = 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein + UDP [goid 47220] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]	MGC91010; BB129894; GalTII	MGC91010; BB129894; GalTII
Mus musculus	RefSeq	ILMN_192514	ILMN_228294	B3GALT6	NM_080445.4	NM_080445.4		117592	148352320	NM_080445.4	B3galt6	NP_536693.1	ILMN_2488783	000630121	S	2670	CAAGCTTCCACAAAGACCTTCAGATTCCTGGTGTCTCAGCAAAGTTTCAG				4qE2	Mus musculus UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6 (B3galt6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The middle Golgi cisterna (or cisternae) [goid 5797] [evidence IDA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: 4-beta-D-galactosyl-O-beta-D-xylosylprotein + UDP-galactose = 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein + UDP [goid 47220] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [evidence IDA]	MGC91010; BB129894; GalTII	MGC91010; BB129894; GalTII
Mus musculus	RefSeq	ILMN_211700	ILMN_211700	EAPP	NM_025456.3	NM_025456.3		66266	142363583	NM_025456.3	Eapp	NP_079732.1	ILMN_1258998	005260438	S	877	GACAAGGATGAAGTCTTTCACTTTTTCAATGTTTTAGCGAGCCATTCTTG	12	-	55774570-55774619	12qC1	Mus musculus E2F-associated phosphoprotein (Eapp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1810011O16Rik	1810011O16Rik
Mus musculus	Riken	ILMN_203621	ILMN_203621	B430110C06RIK	ri|B430110C06|PX00070P10|AK046585|4271					AK046585	B430110C06Rik		ILMN_1230460	007510400	S	3695	CCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCGAGAAAGTTTGGC										
Mus musculus	RefSeq	ILMN_211570	ILMN_211570	AURKA	NM_011497.3	NM_011497.3		20878	118130130	NM_011497.3	Aurka	NP_035627.1	ILMN_2617228	000380520	S	1710	GTGACACCCATTCAGGGTCTTGTTTCCAGTCGTCTGAAGCCCGTGCGGGA	2	-	172181841-172181890	2qH3	Mus musculus aurora kinase A (Aurka), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IPI]	Aurora-A; AU019385; Stk6; AW539821; Ark1; Ayk1; IAK; AIRK1	Aurora-A; AU019385; Stk6; AW539821; Ark1; Ayk1; IAK; AIRK1
Mus musculus	RefSeq	ILMN_214498	ILMN_214498	9130404D08RIK	NM_028993.3	NM_028993.3		74549	142349348	NM_028993.3	9130404D08Rik	NP_083269.3	ILMN_2757006	002030368	S	2789	CTAGCCCTTGGGTCCCAGGGACCTACCCTCAATACCTGCATCACAGCCCT	8	-	72542552-72542601	8qB3.3	Mus musculus RIKEN cDNA 9130404D08 gene (9130404D08Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC159271; C77863; KIAA0892; C79014; mKIAA0892; A930019L04Rik	MGC159271; C77863; KIAA0892; C79014; mKIAA0892; A930019L04Rik
Mus musculus	RefSeq	ILMN_214498	ILMN_214498	9130404D08RIK	NM_028993.3	NM_028993.3		74549	142349348	NM_028993.3	9130404D08Rik	NP_083269.3	ILMN_2648607	005220524	S	174	TCCGAACATCTAGCCCGCCCAAGATCCGCTTGTGCGTTCATTGCCTGCAG	8	-	72566410-72566459	8qB3.3	Mus musculus RIKEN cDNA 9130404D08 gene (9130404D08Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC159271; C77863; KIAA0892; C79014; mKIAA0892; A930019L04Rik	MGC159271; C77863; KIAA0892; C79014; mKIAA0892; A930019L04Rik
Mus musculus	RefSeq	ILMN_216857	ILMN_216857	CIT	NM_007708.3	NM_007708.3		12704	124487318	NM_007708.3	Cit	NP_031734.3	ILMN_1246130	004570689	S	6667	CTACCGAGACAGAGAGGGTCGGACAGAGCTGCGCAGGGACAAGTCTCCAG	5	+	116455908-116455957	5qF	Mus musculus citron (Cit), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The cell cycle process whereby a cell progresses from metaphase to anaphase during mitosis, triggered by the destruction of mitotic cyclins [goid 7091] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of dendrite morphogenesis [goid 50774] [evidence IDA]; The process by which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons [goid 48699] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	CRIK; C030025P15Rik; Cit-k; CRIK-SK	CRIK; C030025P15Rik; Cit-k; CRIK-SK
Mus musculus	Riken	ILMN_204274	ILMN_204274	9630030O14RIK	ri|9630030O14|PX00115G22|AK036054|1533					AK036054	9630030O14Rik		ILMN_1230707	001980136	S	1157	CATGGGTGCTGGGAACAGAACCTGGGTCCTCTCAAAGAGTAATGGCGCTC										
Mus musculus	RefSeq	ILMN_207490	ILMN_207490	CDH7	XM_147289.1	XM_147289.1			20857892	XM_147289.1	Cdh7		ILMN_2587838	004010458	I	500	CCTGCAAGCCCATGTGGACTACGGGTAGAATGAGCAATGCAAAGAGTTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185267	ILMN_185267	TRIM29	NM_023655.1	NM_023655.1		72169	29789214	NM_023655.1	Trim29	NP_076144.1	ILMN_1218207	004490332	S	1998	GAGGGGCACTTTTGGCTTACGCTTCCCCCTCCCTGAATAAACCATTTGTC	9	+	43144144-43144193	9qA5.1	Mus musculus tripartite motif protein 29 (Trim29), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110047J21Rik; 4732461M22Rik; 2810431N19Rik; AI119726	1110047J21Rik; 4732461M22Rik; 2810431N19Rik; AI119726
Mus musculus	RefSeq	ILMN_185267	ILMN_185267	TRIM29	NM_023655.1	NM_023655.1		72169	29789214	NM_023655.1	Trim29	NP_076144.1	ILMN_3008888	006770754	S	1895	CACTGGGCTTTGAGAGAGCCAAATCAGGAACAGCACTGGATGTTGGGAGC	9	+	43144041-43144090	9qA5.1	Mus musculus tripartite motif protein 29 (Trim29), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110047J21Rik; 4732461M22Rik; 2810431N19Rik; AI119726	1110047J21Rik; 4732461M22Rik; 2810431N19Rik; AI119726
Mus musculus	RefSeq	ILMN_210923	ILMN_210923	SMARCE1	NM_020618.3	NM_020618.3		57376	41055974	NM_020618.3	Smarce1	NP_065643.1	ILMN_2880246	006100577	S	2467	GAGAGCTGCGCCTGCTTATCTAGAGTGCTGTTCAGTGTAGTCGATCTGGG	11	-	99070763-99070812	11qD	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 (Smarce1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	5830412H02Rik; Baf27; 2810417B20Rik; 9030408N19Rik	5830412H02Rik; Baf27; 2810417B20Rik; 9030408N19Rik
Mus musculus	RefSeq	ILMN_210923	ILMN_210923	SMARCE1	NM_020618.3	NM_020618.3		57376	41055974	NM_020618.3	Smarce1	NP_065643.1	ILMN_2610600	000060563	S	2429	GGGAGTACAGTTGTTCTTTCTGTGGATTCCTTGTTGGTGAGAGCTGCGCC	11	-	99070801-99070850	11qD	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 (Smarce1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	5830412H02Rik; Baf27; 2810417B20Rik; 9030408N19Rik	5830412H02Rik; Baf27; 2810417B20Rik; 9030408N19Rik
Mus musculus	RefSeq	ILMN_185711	ILMN_245180	EMX2OS	NR_002863.1	NR_002863.1		329078	84872157	NR_002863.1	Emx2os		ILMN_2429356	005260327	S	4932	GGGAAGACTATTTTGCCAAGTTCCAGCCTCCAGCACGGCAAAGGTGCCCT	19	-	59499635-59499684	19qD3	Mus musculus empty spiracles homolog 2 (Drosophila) opposite strand (Emx2os), non-coding RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_219201	ILMN_219201	CLEC4D	NM_010819.3	NM_010819.3		17474	142350362	NM_010819.3	Clec4d	NP_034949.2	ILMN_2705628	000010170	S	624	AAACGGTTTTCTTATTTCCTGGGACTTGCTGATGAGAATGTGGAAGGCCA	6	+	123220323-123220372	6qF2	Mus musculus C-type lectin domain family 4, member d (Clec4d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC117678; mcl; Clecsf8; Mpcl; mMCL	MGC117678; mcl; Clecsf8; Mpcl; mMCL
Mus musculus	RefSeq	ILMN_224169	ILMN_226023	OLFR1023	NM_146587.2	NM_146587.2		258580	113195675	NM_146587.2	Olfr1023	NP_666798.2	ILMN_2775910	004480307	S	655	CTTTTCATTTTCATAGCTATATTGAGGATCCGTTCAGCTAAGGGAAGGCA	2	+	85727613-85727662	2qD	Mus musculus olfactory receptor 1023 (Olfr1023), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR196-3	MOR196-3
Mus musculus	RefSeq	ILMN_186451	ILMN_250481	IL1RL2	NM_133193.3	NM_133193.3		107527	146149158	NM_133193.3	Il1rl2	NP_573456.1	ILMN_1241831	002570279	S	1565	GCACCAGAGTCGTCTAGCTTCGGCTTTCTAAAGAACTTGTCAGAAGAACA				1qB	Mus musculus interleukin 1 receptor-like 2 (Il1rl2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4909] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [evidence ISS]	AW551444; AI481289	AW551444; AI481289
Mus musculus	Riken	ILMN_202552	ILMN_202552	SNCA	ri|4430402N11|PX00011C22|AK014472|1409					AK014472	Snca		ILMN_1240878	006450170	S	1117	GAGGACCCCTGGAAGATGACGTTTCACAAACCTCATGATCTTACAGTAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; The chemical reactions and pathways involving neutral lipids, lipids only soluble in solvents of very low polarity [goid 6638] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IGI]; Any process that modulates the frequency, rate or extent of locomotion of a cell or organism [goid 40012] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50806] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IMP]; The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP, as it occurs in the mitochondrial inner membrane or chloroplast thylakoid membrane; as in, but not restricted to, the eukaryotes (Eukaryota, ncbi_taxonomy_id:2759) [goid 42775] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 34599] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA [goid 50812] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acyl-CoA [goid 50812] [evidence IDA]; The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 1774] [evidence IMP]; Any process that modulates the frequency or rate of macrophage activation [goid 43030] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IGI]; Any process that modulates the frequency, rate or extent of the regulated release of glutamate [goid 14048] [evidence IMP]; A process that modulates synaptic plasticity such that synapses are changed resulting in the increase in the rate, or frequency of synaptic transmission at the synapse [goid 60291] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IGI]; The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42416] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IGI]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter [goid 1956] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IMP]	Interacting selectively with arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer [goid 50544] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]		
Mus musculus	RefSeq	ILMN_216508	ILMN_216508	AEBP1	NM_009636.1	NM_009636.1		11568	6752997	NM_009636.1	Aebp1	NP_033766.1	ILMN_2873822	004480364	S	3603	AAGCCCTGCCCAATTCAAACTAAGGCAGCACCTCCCAAGCCTGTGCCAGC	11	+	5771863-5771912	11qA1	Mus musculus AE binding protein 1 (Aebp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ACLP	ACLP
Mus musculus	RefSeq	ILMN_184524	ILMN_310967	LOC100040402	XM_001474628.1	XM_001474628.1		100040402	149261878	XM_001474628.1	LOC100040402	XP_001474678.1	ILMN_2442889	006980470	S	406	AATCGATTGGGTGGGACAGGAGAGACCCGGCTCCTCTTCCGGGATTCTCT	11	+	51570223-51570272	11qB1.3	PREDICTED: Mus musculus hypothetical protein LOC100040402 (LOC100040402), mRNA.					
Mus musculus	RefSeq	ILMN_186735	ILMN_251002	CKS1B	NM_016904.1	NM_016904.1		54124	8393134	NM_016904.1	Cks1b	NP_058600.1	ILMN_1233989	001170273	S	635	TGGGTATTGTATTTATGATGACTTATGGATTTATGTTTCAATGTATTGGA	3	-	89219466-89219515	3qF1	Mus musculus CDC28 protein kinase 1b (Cks1b), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]	sid1334; AA407784; Cks1; 2610005D03Rik; 2410005G18Rik	sid1334; AA407784; Cks1; 2610005D03Rik; 2410005G18Rik
Mus musculus	RefSeq	ILMN_201193	ILMN_317292	LOC100047827	XM_001479392.1	XM_001479392.1		100047827	149253805	XM_001479392.1	LOC100047827	XP_001479442.1	ILMN_1237216	000770403	S	604	ATTTTGGAAGGCTCCTGTTGGCTCCCAGGAGAGAGATCCTGGTCTTGACC					PREDICTED: Mus musculus similar to Hmgn2 protein (LOC100047827), mRNA.					
Mus musculus	MEEBO	ILMN_219732	ILMN_219732	4631423B10RIK	scl28530.1.1_256	NM_175422.2			31341855	NM_175422.2	4631423B10Rik		ILMN_2712895	006860240	S	3102	ACTGTATCCACCCACTCCCAGGGTTGACATGGCTTGAGCTGCTGGCTGTG										
Mus musculus	Riken	ILMN_206346	ILMN_206346	CDH2	ri|D330048D07|PX00192P08|AK084821|3752					AK084821	Cdh2		ILMN_1216390	002350040	S	3553	GCAAAGTGTCTATAAACTCAGCACTCTGGGGGGGCAGAGACCAGAGAGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217771	ILMN_217771	WDR78	NM_146254.2	NM_146254.2		242584	144922612	NM_146254.2	Wdr78	NP_666366.2	ILMN_2687391	005560669	S	3212	CAGGGCAGTGAGAACTACCTACTACGCATAGCCATTGCTTCATGGTCTCC	4	-	102710852-102710901	4qC6	Mus musculus WD repeat domain 78 (Wdr78), mRNA.				MGC31722; BC028975; MGC38950	MGC31722; BC028975; MGC38950
Mus musculus	Riken	ILMN_203453	ILMN_203453	E430021A19RIK	ri|E430021A19|PX00099E20|AK088592|2962					AK088592	E430021A19Rik		ILMN_2557426	005810445	S	481	AATTGTTGAGCCCACCAGTCAGGCCATCATCGCCATCACCTTTGCCAACT										
Mus musculus	RefSeq	ILMN_213359	ILMN_213359	HRH2	NM_008286.2	NM_008286.2		15466	58331135	NM_008286.2	Hrh2	NP_032312.2	ILMN_2636282	001260594	S	1495	GTAGATGGCAGGAGGAGAAGCCCCTGAAGCTTCAGGTGTGGAGTGGGACA	13	+	54310367-54310416	13qB1	Mus musculus histamine receptor H2 (Hrh2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with histamine to initiate a change in cell activity. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans [goid 4969] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221595	ILMN_221595	SFRS11	NM_026989.3	NM_026989.3		69207	148224470	NM_026989.3	Sfrs11	NP_081265.1	ILMN_1226169	005560537	S	2777	CCCCCTTGTTGTAGATGCCTGCAGAATCGTCACCAGTACCTTCTGTCTAA				3qH4	Mus musculus splicing factor, arginine/serine-rich 11 (Sfrs11), transcript variant 3, mRNA.				2610019N13Rik; 0610009J05Rik	2610019N13Rik; 0610009J05Rik
Mus musculus	RefSeq	ILMN_200817	ILMN_200817	LOC382218	XM_356331.1	XM_356331.1			38086328	XM_356331.1	LOC382218		ILMN_2540111	001500121	S	1180	GCTGGTACCCAGGACAACCACCTCTGCATGCTTCTTTGGAGGACTGCTAC										
Mus musculus	RefSeq	ILMN_200517	ILMN_257431	HSPA1A	NM_010479.2	NM_010479.2		193740	124339828	NM_010479.2	Hspa1a	NP_034609.2	ILMN_1245039	004860470	S	125	CTGCCGCGGAGCGCAACCTTCCCAGGAGCATCCCTGCCGCGGAGCGCAAC	17	-	35109877-35109926	17qB1	Mus musculus heat shock protein 1A (Hspa1a), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hsp70-3; hsp68; Hsp72; hsp70A1; Hsp70.3	Hsp70-3; hsp68; Hsp72; hsp70A1; Hsp70.3
Mus musculus	RefSeq	ILMN_257431	ILMN_257431	HSPA1A	NM_010479.2	NM_010479.2		193740	124339828	NM_010479.2	Hspa1a	NP_034609.2	ILMN_2829594	002350017	S	2503	ACATCAGGAGACTGTTGAGTTCTTTGTGTTTGGACTCTCCCCTGGGCCAC	17	-	35107730-35107779	17qB1	Mus musculus heat shock protein 1A (Hspa1a), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hsp70-3; hsp68; Hsp72; hsp70A1; Hsp70.3	Hsp70-3; hsp68; Hsp72; hsp70A1; Hsp70.3
Mus musculus	RefSeq	ILMN_208843	ILMN_244152	NTSR2	NM_008747.2	NM_008747.2		18217	121583911	NM_008747.2	Ntsr2	NP_032773.2	ILMN_2769234	002710367	S	1378	CCAGTGCATACTGCAGGCAAGCCACGTAACACCTCCTGCCCTCAACTTCC	12	+	16666873-16666922	12qA1.1	Mus musculus neurotensin receptor 2 (Ntsr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; G-protein coupled receptor for the tridecapeptide neurotensin. Associated with G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [goid 16492] [evidence IDA]	NTRL; NT2R	NTRL; NT2R
Mus musculus	MEEBO	ILMN_186083	ILMN_186083	ALG6	scl25243.13_475				31341503	NM_178784	Alg6		ILMN_2755206	004480209	S	3135	TGCATGCTTGTCTCCTAAGCACCAGGATTAAAGGTTTGGTCCCCCCAGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 46527] [evidence ISO]		
Mus musculus	RefSeq	ILMN_209602	ILMN_209602	FRYL	NM_028194.2	NM_028194.2		72313	119964715	NM_028194.2	Fryl	NP_082470.2	ILMN_2635260	000510059	S	9267	CGGCCCAGACCACGATAGAAACTGCCATTCACTCTCTGATCGAAACCTTG	5	-	73413787-73413836	5qC3.2	Mus musculus furry homolog-like (Drosophila) (Fryl), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI930088; 2510002A14Rik; 2010313D22Rik; 2310004H21Rik; mKIAA0826; 9030227G01Rik	AI930088; 2510002A14Rik; 2010313D22Rik; 2310004H21Rik; mKIAA0826; 9030227G01Rik
Mus musculus	RefSeq	ILMN_199967	ILMN_209602	FRYL	NM_028194.2	NM_028194.2		72313	119964715	NM_028194.2	Fryl	NP_082470.2	ILMN_2537123	005390564	S	9506	AACTGCAAACTGATGGAACTTAACCTGGAGATCAGAGAGTCTCTCCGCAC	5	-	73413344-73413393	5qC3.2	Mus musculus furry homolog-like (Drosophila) (Fryl), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI930088; 2510002A14Rik; 2010313D22Rik; 2310004H21Rik; mKIAA0826; 9030227G01Rik	AI930088; 2510002A14Rik; 2010313D22Rik; 2310004H21Rik; mKIAA0826; 9030227G01Rik
Mus musculus	MEEBO	ILMN_214083	ILMN_214083	NR2C2	scl022026.12_16	XM_132700.4			38084962	XM_132700.4	Nr2c2		ILMN_2644074	006650707	S	1555	TCCTCAAGATGGAGACAGCAGAATATAATGGCCAGATCACTGGAGCCAGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The meiotic divisions undergone by the primary and secondary spermatocytes to produce a cyst of haploid spermatids [goid 48137] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208963	ILMN_208963	GRAMD4	NM_172611.2	NM_172611.2		223752	142368891	NM_172611.2	Gramd4	NP_766199.1	ILMN_1243615	006280561	S	3904	GTCTGTTTTGGATCTGTACATAATTGTTGCTGGTGTAACTTTTGTTCTAC	15	+	85967865-85967914	15qE2	Mus musculus GRAM domain containing 4 (Gramd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		9930016O13	9930016O13
Mus musculus	MEEBO	ILMN_190776	ILMN_190776	SCL000405.1_28	scl000405.1_28	XM_356765.1			38076692	XM_356765.1	scl000405.1_28		ILMN_1222873	002120494	S	3	GGTTCCCATACCTTTCATGTCTACACTCACAGCACATGTATACCATTCAG										
Mus musculus	RefSeq	ILMN_214287	ILMN_214287	PDE4D	NM_011056.2	NM_011056.2		238871	118130222	NM_011056.2	Pde4d	NP_035186.1	ILMN_1215021	000160403	S	2172	GGGCCGGCAGGGACAGACTGAAAAATTCCAGTTTGAACTAACCTTGGAGG	13	+	110741300-110741349	13qD2.1-qD2.2	Mus musculus phosphodiesterase 4D, cAMP specific (Pde4d), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6198] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Dpde3; 9630011N22Rik	Dpde3; 9630011N22Rik
Mus musculus	RefSeq	ILMN_214287	ILMN_214287	PDE4D	NM_011056.2	NM_011056.2		238871	118130222	NM_011056.2	Pde4d	NP_035186.1	ILMN_1236700	004070706	S	2504	GTGCATGTCACATGCCACAACCATGGTCACACCTCACTGTCATCTGCCAG	13	+	110741632-110741681	13qD2.1-qD2.2	Mus musculus phosphodiesterase 4D, cAMP specific (Pde4d), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6198] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Dpde3; 9630011N22Rik	Dpde3; 9630011N22Rik
Mus musculus	MEEBO	ILMN_213055	ILMN_213055	SRD5A2	scl49624.7.1_29	NM_053188.1			16716484	NM_053188.1	Srd5a2		ILMN_2633091	006560639	S	684	TTGAATGGATGGGCTACGCTTTGGCCACTTGGTCTGTTCCAGCCTTTGCT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IMP]; The chemical reactions and pathways resulting in the formation of androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics [goid 6702] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor [goid 3865] [evidence IMP]		
Mus musculus	RefSeq	ILMN_209840	ILMN_209840	SEPT7	NM_009859.3	NM_009859.3		235072	118129873	NM_009859.3	Sept7	NP_033989.2	ILMN_1217625	001110192	S	2139	CCTTTAACTCCCTTTTTACACTTTATGGAAAGTAGCAGGAGGAGAAATGC	9	+	25115891-25115940	9qA4	Mus musculus septin 7 (Sept7), mRNA.	Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	E430034N22; Cdc10; mKIAA4020; KIAA4020	E430034N22; Cdc10; mKIAA4020; KIAA4020
Mus musculus	RefSeq	ILMN_199728	ILMN_199728	LOC383878	XM_357306.1	XM_357306.1			38076605	XM_357306.1	LOC383878		ILMN_2536265	006200427	S	335	GCGAAGCTGGTCTTCGATTTTGGTGCAGAAACCTGGGAACTTCGGAACTG										
Mus musculus	RefSeq	ILMN_220124	ILMN_220124	TRIM60	NM_153097.1	NM_153097.1		234329	24233549	NM_153097.1	Trim60	NP_694737.1	ILMN_2717897	003830167	S	1590	GGTGCGACCCAGCAAGGTCGGCATATTTTTGGATTATGAATTGGGTGAGC	8	-	67524229-67524278	8qB3.1	Mus musculus tripartite motif-containing 60 (Trim60), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rnf33; 2czf45	Rnf33; 2czf45
Mus musculus	RefSeq	ILMN_191745	ILMN_236589	TPTE	NM_199257.1	NM_199257.1		234129	40549439	NM_199257.1	Tpte	NP_954866.1	ILMN_2497341	005670669	S	2129	CAGAGCAATAATCAATGTGTTCCATTGCCCGGCTCTATACGATGATGTGA	8	+	23476409-23476458	8qA2	Mus musculus transmembrane phosphatase with tensin homology (Tpte), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]			MGC130293; Pten2	MGC130293; Pten2
Mus musculus	RefSeq	ILMN_191745	ILMN_236589	TPTE	NM_199257.1	NM_199257.1		234129	40549439	NM_199257.1	Tpte	NP_954866.1	ILMN_1216939	005220487	S	1188	CGGCGCTATTTCTCTGACGTACTGAACACCCTAGACGCTGTGGTCATCGG	8	+	23443641-23443690	8qA2	Mus musculus transmembrane phosphatase with tensin homology (Tpte), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]			MGC130293; Pten2	MGC130293; Pten2
Mus musculus	RefSeq	ILMN_191694	ILMN_261397	YPEL2	NM_001005341.3	NM_001005341.3		77864	115496192	NM_001005341.3	Ypel2	NP_001005341.1	ILMN_2481352	007320427	S	4465	ATTGTGGTTGATTAATAAAATTACTATACAGTCATGAAATGTACCCGAAA	11	-	86750314-86750363	11qC	Mus musculus yippee-like 2 (Drosophila) (Ypel2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			E130113K08Rik; 6430570G24; RP23-188E9.1	E130113K08Rik; 6430570G24; RP23-188E9.1
Mus musculus	RefSeq	ILMN_261397	ILMN_261397	YPEL2	NM_001005341.3	NM_001005341.3		77864	115496192	NM_001005341.3	Ypel2	NP_001005341.1	ILMN_3160605	007550280	S	348	GCCCCACGCTCAGCAGCGCCAATGGTGAAGATGACAAGATCCAAGACTTT	11	-	86785398-86785427:86785428-86785447	11qC	Mus musculus yippee-like 2 (Drosophila) (Ypel2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			E130113K08Rik; 6430570G24; RP23-188E9.1	E130113K08Rik; 6430570G24; RP23-188E9.1
Mus musculus	MEEBO	ILMN_213476	ILMN_213476	RABL5	scl27111.3.1_10	NM_026073.2			31982658	NM_026073.2	Rabl5		ILMN_2637398	004540059	S	212	AGAACCCACATGTCACCAGCAACAACAAAGGCACGGGCTGCGAATTCGAG								Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214008	ILMN_214008	ACCN2	NM_009597.1	NM_009597.1		11419	45433492	NM_009597.1	Accn2	NP_033727.1	ILMN_2643241	000520367	S	3561	GCAGATCACCTGTGTACGTTGGCCTGGAGCCAGAGAGCAAGGCTTTGGCA	15	+	99531356-99531405	15qF1	Mus musculus amiloride-sensitive cation channel 2, neuronal (Accn2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence ISO]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transfer of a inorganic cations with a valency of one from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage [goid 15077] [evidence ISO]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA];  [goid 15280] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	AI843610; ASIC1a; BNaC2; B530003N02Rik; ASIC1; ASIC1 beta; ASIC; ASICalpha	AI843610; ASIC1a; BNaC2; B530003N02Rik; ASIC1; ASIC1 beta; ASIC; ASICalpha
Mus musculus	RefSeq	ILMN_213438	ILMN_213438	TCSTV3	NM_153523.2	NM_153523.2		236219	24475842	NM_153523.2	Tcstv3	NP_705743.1	ILMN_2637059	004280672	S	727	TGCTAAGACTTGCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGC	Un|NT_053651.2	-	3154-3203		Mus musculus 2-cell-stage, variable group, member 3 (Tcstv3), mRNA.					
Mus musculus	Riken	ILMN_203771	ILMN_203771	CYP2J6	ri|A230052A02|PX00128E16|AK038636|3774					AK038636	Cyp2j6		ILMN_2559852	004040041	S	3468	AAGCTACCCCACATAGGTAAGACTAGCAATGTTGTATCCAGGAATGCTGC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	Riken	ILMN_204229	ILMN_204229	A730047D20RIK	ri|A730047D20|PX00151M01|AK043006|4141					AK043006	A730047D20Rik		ILMN_1215014	007160309	S	3753	CCAGCCTTCTCTCAAACAGTGTGTGGCTCAGAATGCTCCAAAGGTTCTCC										
Mus musculus	MEEBO	ILMN_223916	ILMN_223916	4930579J09RIK	scl52752.15.5_7				19526857	NM_133689	4930579J09Rik		ILMN_2771429	005960168	S	1417	CCCCTCCGCTCCCCAAGATTGCCTCGGTAACTTTACTAAGGAATTAAAGA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_203574	ILMN_203574	A230093N12RIK	ri|A230093N12|PX00129H06|AK039083|1674					AK039083	A230093N12Rik		ILMN_1256023	005260678	S	1222	GCTACGCACACACTGTACTGCTACGTTTCTAGCCCTTGTTCTGCCTTGTC										
Mus musculus	RefSeq	ILMN_217971	ILMN_217971	P2RY2	NM_008773.3	NM_008773.3		18442	142354330	NM_008773.3	P2ry2	NP_032799.2	ILMN_2689964	007610364	S	129	AGCGCCGGTCGAGTCAGCGCCAAACAGGGAGAGCCCATTACGTGACTGTC	7	-	108160327-108160376	7qE3	Mus musculus purinergic receptor P2Y, G-protein coupled 2 (P2ry2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y2	P2Y2
Mus musculus	RefSeq	ILMN_209896	ILMN_209896	5730536A07RIK	NM_026635.3	NM_026635.3		68250	71773979	NM_026635.3	5730536A07Rik	NP_080911.1	ILMN_2600218	005550068	S	584	CTACATTTCTGAAGGAACTCACTCGACAGAAGAAGACATCAACAAGCAGA	9	+	65984117-65984154:65986144-65986155	9qC	Mus musculus RIKEN cDNA 5730536A07 gene (5730536A07Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fam96a	Fam96a
Mus musculus	RefSeq	ILMN_209896	ILMN_209896	5730536A07RIK	NM_026635.3	NM_026635.3		68250	71773979	NM_026635.3	5730536A07Rik	NP_080911.1	ILMN_2695450	006550184	S	1174	AAATATCTACTGTGCCCAAATGTATTTGATTTAAACCATTCTAAAATAAA	9	+	65986696-65986745	9qC	Mus musculus RIKEN cDNA 5730536A07 gene (5730536A07Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fam96a	Fam96a
Mus musculus	RefSeq	ILMN_199535	ILMN_199535	LOC382701	XM_356631.1	XM_356631.1			38074055	XM_356631.1	LOC382701		ILMN_1231629	004150673	S	317	AGGAAGAGTTGGGCTTGGTGCACAGGTCAGACTATGACAGATCTGGGGAC										
Mus musculus	RefSeq	ILMN_219037	ILMN_245093	AGRP	NM_007427.2	NM_007427.2		11604	51491876	NM_007427.2	Agrp	NP_031453.1	ILMN_2703427	007510431	S	546	TGCCTTTTGCTACTGCCGCAAGCTGGGTACGGCCACGAACCTCTGTAGTC	8	-	108090663-108090712	8qD3	Mus musculus agouti related protein (Agrp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IDA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IDA]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IEA]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IDA]	Agrt; Art	Agrt; Art
Mus musculus	MEEBO	ILMN_215702	ILMN_215702	MPP3	scl0013384.1_233	NM_007863.1			6681192	NM_007863.1	Mpp3		ILMN_2662595	001510671	S	2627	GTCCTTTGCGTGCAGCTGTCTCTTTACTGCCTCGGTTCCAAGCTGTCTCT								Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_205942	ILMN_205942	C130078D09RIK	ri|C130078D09|PX00171J01|AK048572|3060					AK048572	C130078D09Rik		ILMN_1244755	006520091	S	613	GCCAGCTACCGCAGCAGACAGATGCAAACCATCCAGAGAGTTCTAGTGAG										
Mus musculus	RefSeq	ILMN_187046	ILMN_238989	CDH7	NM_172853.2	NM_172853.2		241201	118129933	NM_172853.2	Cdh7	NP_766441.1	ILMN_2690911	006940553	S	3074	GTTGTCAGGGAGCCAAAGGCACCTGGATCTAACTTTCATGGTACCCTCTG	1	+	112035299-112035348	1qE2.1	Mus musculus cadherin 7, type 2 (Cdh7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	cadherin 7; CDH7L1; MGC118246; 9330156F07Rik	cadherin 7; CDH7L1; MGC118246; 9330156F07Rik
Mus musculus	RefSeq	ILMN_198638	ILMN_245168	GPR174	NM_001033251.2	NM_001033251.2		213439	141802201	NM_001033251.2	Gpr174	NP_001028423.1	ILMN_1242596	002470722	S	1401	CTGGCCCAATCTGTTGCCATGATAACTATCGGAGAGGTGGTTGGGTTTGT	X	+	104488457-104488506	XqD	Mus musculus G protein-coupled receptor 174 (Gpr174), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	Gm376	Gm376
Mus musculus	MEEBO	ILMN_211592	ILMN_211592	NPY1R	scl018166.3_27	NM_010934.1			6754881	NM_010934.1	Npy1r		ILMN_1259965	005260202	S	1762	CCCGGACTACCTTCGTTCCCTGCTAGGCATCATCTTAGTCTGTCACAAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IDA]; Combining with pancreatic polypeptide PP to initiate a change in cell activity [goid 1602] [evidence IDA]; Combining with gut peptide YY to initiate a change in cell activity [goid 1601] [evidence IDA]		
Mus musculus	RefSeq	ILMN_253111	ILMN_253111	HIST2H3B	NM_178215.1	NM_178215.1		319154	30061346	NM_178215.1	Hist2h3b	NP_835587.1	ILMN_2934120	007330452	S	331	TGCGCCATCCACGCCAAACGCGTCACCATCATGCCCAAGGACATCCAGTT	3	+	96072947-96072996	3qF2.1	Mus musculus histone cluster 2, H3b (Hist2h3b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H3-615; H3-616	H3-615; H3-616
Mus musculus	RefSeq	ILMN_219988	ILMN_219988	KCNE4	NM_021342.1	NM_021342.1		57814	10946657	NM_021342.1	Kcne4	NP_067317.1	ILMN_1256894	006560435	S	2149	GGGGCCCTCTGTTCACTTTAAGATTCAGAGTGTGGATCAACTCCAAAGGG	1	+	78816286-78816335	1qC4	Mus musculus potassium voltage-gated channel, Isk-related subfamily, gene 4 (Kcne4), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence ISS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	MiRP3; AW487937	MiRP3; AW487937
Mus musculus	RefSeq	ILMN_200365	ILMN_200365	LOC386327	XM_359172.1	XM_359172.1			38081434	XM_359172.1	LOC386327		ILMN_1223932	002710373	S	788	GTGCTGTGAGAATTATAACAGCGAGAAGCTGGAAAGAACCCAGATGCCCC										
Mus musculus	Riken	ILMN_201620	ILMN_201620	PLD3	ri|0710008I03|R000005I20|AK003045|754					AK003045	Pld3		ILMN_2543265	000010333	S	485	GGTCTGGGCATGCTGTGTGTGACCCCACTGGCAAGCATGAGTTGAGCCAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210987	ILMN_210987	EXTL3	NM_018788.2	NM_018788.2		54616	46852188	NM_018788.2	Extl3	NP_061258.2	ILMN_2708169	007380093	S	3004	GCCCCAGGCCATCCGGGACATGGTGGACGAGTACATCAACTGTGAGGATA	14	-	65675718-65675767	14qD1	Mus musculus exostoses (multiple)-like 3 (Extl3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan = UDP + alpha-N-acetyl-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan [goid 1888] [evidence IEA]	mKIAA0519; KIAA0519; Ext1l; AU040105; 2900009G18Rik	mKIAA0519; KIAA0519; Ext1l; AU040105; 2900009G18Rik
Mus musculus	RefSeq	ILMN_210987	ILMN_210987	EXTL3	NM_018788.2	NM_018788.2		54616	46852188	NM_018788.2	Extl3	NP_061258.2	ILMN_3001452	000460180	S	5556	GGTCACACTCAGCTACCTAGTCTCAGCTCCAGGGCCAGGACAGCTTTGTT	14	-	65671158-65671207	14qD1	Mus musculus exostoses (multiple)-like 3 (Extl3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan = UDP + alpha-N-acetyl-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan [goid 1888] [evidence IEA]	mKIAA0519; KIAA0519; Ext1l; AU040105; 2900009G18Rik	mKIAA0519; KIAA0519; Ext1l; AU040105; 2900009G18Rik
Mus musculus	RefSeq	ILMN_210987	ILMN_210987	EXTL3	NM_018788.2	NM_018788.2		54616	46852188	NM_018788.2	Extl3	NP_061258.2	ILMN_2630211	002060239	S	3420	CCTTTGCTGGGAGAGGCAGCAGGAAGAGTGGAAAGGGATAGCTGTCTTTC	14	-	65673294-65673343	14qD1	Mus musculus exostoses (multiple)-like 3 (Extl3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan = UDP + alpha-N-acetyl-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan [goid 1888] [evidence IEA]	mKIAA0519; KIAA0519; Ext1l; AU040105; 2900009G18Rik	mKIAA0519; KIAA0519; Ext1l; AU040105; 2900009G18Rik
Mus musculus	RefSeq	ILMN_210987	ILMN_210987	EXTL3	NM_018788.2	NM_018788.2		54616	46852188	NM_018788.2	Extl3	NP_061258.2	ILMN_1239857	000610528	S	5761	GTCCATCTGTCTGCCCCTTTCAAACCATGAGCACAAAGGTCTTACGTTGG	14	-	65670953-65671002	14qD1	Mus musculus exostoses (multiple)-like 3 (Extl3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan = UDP + alpha-N-acetyl-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan [goid 1888] [evidence IEA]	mKIAA0519; KIAA0519; Ext1l; AU040105; 2900009G18Rik	mKIAA0519; KIAA0519; Ext1l; AU040105; 2900009G18Rik
Mus musculus	MEEBO	ILMN_195929	ILMN_195929	ZDHHC12	scl19480.4_1	NM_025428.1			13384825	NM_025428.1	Zdhhc12		ILMN_2520032	002190543	S	4	AGACACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211408	ILMN_211408	5031414D18RIK	NM_198642.1	NM_198642.1		271221	38348521	NM_198642.1	5031414D18Rik	NP_941044.2	ILMN_2985657	006560048	S	2103	GCAGGGCCTGCTTTCACAAACAGTGTTTCCAGTCTTCGAGATGCCCGTGC	14	+	75451779-75451828	14qD3	Mus musculus RIKEN cDNA 5031414D18 gene (5031414D18Rik), mRNA.				MGC60829; Gm911; Gm744	MGC60829; Gm911; Gm744
Mus musculus	RefSeq	ILMN_211408	ILMN_211408	5031414D18RIK	NM_198642.1	NM_198642.1		271221	38348521	NM_198642.1	5031414D18Rik	NP_941044.2	ILMN_2615575	001110575	S	2036	GAGTTTTGTCAGAGCACGACGGTCATCTTCCCATTTCAGACCACGACTTG	14	+	75449936-75449985	14qD3	Mus musculus RIKEN cDNA 5031414D18 gene (5031414D18Rik), mRNA.				MGC60829; Gm911; Gm744	MGC60829; Gm911; Gm744
Mus musculus	RefSeq	ILMN_193419	ILMN_193419	XCR1	NM_011798.3	NM_011798.3		23832	142362126	NM_011798.3	Xcr1	NP_035928.1	ILMN_2497004	006180240	S	4264	GGTGCTTTGCAACTCAGCAACAAGCAAACACGGGACTGAGGAAGCTAAGC	9	-	123761575-123761624	9qF4	Mus musculus chemokine (C motif) receptor 1 (Xcr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IDA]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with chemokines, small chemoattractant molecules normally used to stimulate leukocytes, to initiate a change in cell activity [goid 4950] [evidence IEA]	GPR5; Ccxcr1	GPR5; Ccxcr1
Mus musculus	MEEBO	ILMN_222184	ILMN_222184	B430217B02RIK	scl40226.1.1_221	NM_176938.2			31342423	NM_176938.2	B430217B02Rik		ILMN_1221130	002510221	S	739	AGGCTCCTGCTCATACTCCCAAGGGATCCCTGAACCAGACCTGGGTGAGG										
Mus musculus	RefSeq	ILMN_198520	ILMN_239325	LOC637908	XM_913724.2	XM_913724.2		637908	94379631	XM_913724.2	LOC637908	XP_918817.2	ILMN_1255518	005130626	S	2812	CAGCACAATAGGCAGTGTGAGATGCTCCAGAGAAGGTGTGTGTCCTCAGG				7qA1	PREDICTED: Mus musculus similar to putative pheromone receptor (Go-VN5) (LOC637908), mRNA.					
Mus musculus	RefSeq	ILMN_211108	ILMN_211108	PODN	NM_172874.2	NM_172874.2		242608	32526860	NM_172874.2	Podn	NP_766462.2	ILMN_1229370	003290301	S	2882	TGGGCACTCCTACTGCTGGGAGTCCCTTTTTGTTGTGCCCTGGCAGGTCA	4	-	107687634-107687683	4qC7	Mus musculus podocan (Podn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SLRR5A; 9430070G18; Pcan	SLRR5A; 9430070G18; Pcan
Mus musculus	MEEBO	ILMN_193853	ILMN_193853	KCNMA1	scl016531.1_18				6754435	NM_010610	Kcnma1		ILMN_2723799	006580300	S	3238	TCAGCACCCCCAGCCAGTGTACAAAAAGGTACGTCATCACCAATCCTCCC						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 44444] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IGI]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IMP]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction [goid 60087] [evidence IMP]; The regulation of body fluids process by which parasympathetic nerves stimulate the bladder wall muscle to contract and expel urine from the body [goid 60073] [evidence IMP]; The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body [goid 60083] [evidence IMP]; The reflex process by which a mechanical stimulus applied to the eye elicits a response of the eyelid closing [goid 60082] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The regulation of body fluids process by which parasympathetic nerves stimulate the bladder wall muscle to contract and expel urine from the body [goid 60073] [evidence IMP]; The rhythm of the locomotor activity of an organism during its 24 hour activity cycle [goid 45475] [evidence IMP]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving aldosterone [goid 32344] [evidence IMP]; Any process that decreases cell volume [goid 45794] [evidence IMP]; The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin [goid 46541] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IDA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IGI]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IMP]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IDA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IMP]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IMP]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IGI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 100 to 220 picoSiemens that opens in response to stimulus by concerted actions of internal calcium ions and membrane potential. Large conductance calcium-activated potassium channels are less sensitive to calcium than are small or intermediate conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 60072] [evidence IDA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 100 to 220 picoSiemens that opens in response to stimulus by concerted actions of internal calcium ions and membrane potential. Large conductance calcium-activated potassium channels are less sensitive to calcium than are small or intermediate conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 60072] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193853	ILMN_193853	KCNMA1	scl016531.1_18				6754435	NM_010610	Kcnma1		ILMN_1256814	004560554	S	8	GGCTAACCAGATCAACCAATATAAATCCACAAGCAGCCTGATCCCTCCAA						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 44444] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IGI]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IMP]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction [goid 60087] [evidence IMP]; The regulation of body fluids process by which parasympathetic nerves stimulate the bladder wall muscle to contract and expel urine from the body [goid 60073] [evidence IMP]; The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body [goid 60083] [evidence IMP]; The reflex process by which a mechanical stimulus applied to the eye elicits a response of the eyelid closing [goid 60082] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The regulation of body fluids process by which parasympathetic nerves stimulate the bladder wall muscle to contract and expel urine from the body [goid 60073] [evidence IMP]; The rhythm of the locomotor activity of an organism during its 24 hour activity cycle [goid 45475] [evidence IMP]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving aldosterone [goid 32344] [evidence IMP]; Any process that decreases cell volume [goid 45794] [evidence IMP]; The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin [goid 46541] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IDA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IGI]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IMP]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IDA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IMP]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IMP]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IGI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 100 to 220 picoSiemens that opens in response to stimulus by concerted actions of internal calcium ions and membrane potential. Large conductance calcium-activated potassium channels are less sensitive to calcium than are small or intermediate conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 60072] [evidence IDA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 100 to 220 picoSiemens that opens in response to stimulus by concerted actions of internal calcium ions and membrane potential. Large conductance calcium-activated potassium channels are less sensitive to calcium than are small or intermediate conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 60072] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_205543	ILMN_205543	D630002J18RIK	ri|D630002J18|PX00195H13|AK052598|1116					AK052598	D630002J18Rik		ILMN_1216195	000510709	S	727	GGAAAGCTGTGCACGAGTCAACCCCCTTCTAGACTCAGACCTCCTCTCAG										
Mus musculus	RefSeq	ILMN_248055	ILMN_248055	SLC39A13	NM_026721.1	NM_026721.1		68427	58037118	NM_026721.1	Slc39a13	NP_080997.1	ILMN_2996732	006860300	S	1980	GGCCCTTGTCCTTTGGGTTAAGAGTAAGATGGGGGTGGTGAGGGCTCCAC	2	-	90862873-90862922	2qE1	Mus musculus solute carrier family 39 (metal ion transporter), member 13 (Slc39a13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AA387663; 1100001L14Rik; MGC118284	AA387663; 1100001L14Rik; MGC118284
Mus musculus	Riken	ILMN_201724	ILMN_201724	1810058M03RIK	ri|1810058M03|ZX00043C08|AK007898|384					AK007898	1810058M03Rik		ILMN_1219213	000450291	S	297	GGCGGTGAGTTGGAATCTGTACTCCTTCCTTTGAATGCCCGTCTGAATGC										
Mus musculus	RefSeq	ILMN_214148	ILMN_237786	DUSP27	NM_001033344.2	NM_001033344.2		240892	142368935	NM_001033344.2	Dusp27	NP_001028516.1	ILMN_2644810	003520504	S	3304	ACTTCGCTGAGTTTGGGGCCAAGAGGAAATTCACCCAGAGCTTCATGAGG	1	-	168028950-168028999	1qH2.3	Mus musculus dual specificity phosphatase 27 (putative) (Dusp27), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	Gm209; C130085G02Rik	Gm209; C130085G02Rik
Mus musculus	RefSeq	ILMN_214349	ILMN_214349	OLFR893	NM_146336.1	NM_146336.1		258333	22129624	NM_146336.1	Olfr893	NP_666448.1	ILMN_1237379	003710196	S	654	GTCATATGCTTCCATCCTCTTAAATGTTGTTCAGATGTCATCAGCTACAG	9	+	38017293-38017342	9qA5.1	Mus musculus olfactory receptor 893 (Olfr893), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR170-11	MOR170-11
Mus musculus	RefSeq	ILMN_190290	ILMN_190290	XRCC1	NM_009532.3	NM_009532.3		22594	141803238	NM_009532.3	Xrcc1	NP_033558.2	ILMN_3160475	002070148	S	2249	TCGAGGACTATATGAATGAGCGGGTCCAGTTCGCCATCACGGCCCAGGAG	7	+	25351488-25351523:25351877-25351890	7qA3	Mus musculus X-ray repair complementing defective repair in Chinese hamster cells 1 (Xrcc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The repair of single strand breaks in DNA. Repair of such breaks is mediated by the same enzyme systems as are used in base excision repair [goid 12] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]	MGC102556; Xrcc-1	MGC102556; Xrcc-1
Mus musculus	RefSeq	ILMN_211019	ILMN_211019	MRPL16	NM_025606.3	NM_025606.3		94063	118130301	NM_025606.3	Mrpl16	NP_079882.2	ILMN_2611648	006900470	S	735	GGAAATTCCTGAGCCCATATGACTTGACGCAGAAAGGGCGATACTGGGGC	19	+	11849047-11849096	19qA	Mus musculus mitochondrial ribosomal protein L16 (Mrpl16), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IDA]	2310039D06Rik	2310039D06Rik
Mus musculus	RefSeq	ILMN_212037	ILMN_212037	GMPPA	NM_133708.3	NM_133708.3		69080	145864487	NM_133708.3	Gmppa	NP_598469.1	ILMN_1232272	003190121	S	1314	GGAGCTAAGTCGAAGCTTCACCAACCAAATCATCCTGTGAGGATGCTGCC				1qC4	Mus musculus GDP-mannose pyrophosphorylase A (Gmppa), mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: GTP + alpha-D-mannose 1-phosphate = diphosphate + GDP-mannose [goid 4475] [evidence IEA]	1810012N01Rik	1810012N01Rik
Mus musculus	RefSeq	ILMN_212037	ILMN_212037	GMPPA	NM_133708.3	NM_133708.3		69080	145864487	NM_133708.3	Gmppa	NP_598469.1	ILMN_1216015	000670196	S	154	TTTGAGGTGCCCAAACCTCTGTTTCCTGTGGCAGGCGTTCCCATGATCCA				1qC4	Mus musculus GDP-mannose pyrophosphorylase A (Gmppa), mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: GTP + alpha-D-mannose 1-phosphate = diphosphate + GDP-mannose [goid 4475] [evidence IEA]	1810012N01Rik	1810012N01Rik
Mus musculus	RefSeq	ILMN_222371	ILMN_222371	EPHB6	NM_007680.2	NM_007680.2		13848	31982460	NM_007680.2	Ephb6	NP_031706.2	ILMN_2870074	003140427	S	3440	TGAGGCAGCCAGGCTCAGTGGAAGTGTAAAGCCTGCTCAGGAGTCTGTGA	6	+	41549884-41549911:41549912-41549933	6qB2.1	Mus musculus Eph receptor B6 (Ephb6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Cekl; Mep	Cekl; Mep
Mus musculus	RefSeq	ILMN_212756	ILMN_212756	OLFR197	NM_146484.1	NM_146484.1		258477	33239155	NM_146484.1	Olfr197	NP_666695.1	ILMN_2956500	000060040	S	452	CTGGAATTCTTCATGCTTCAATTCATGAAGGCATGCTGTGCCGATTAACC	16	-	59185806-59185855	16qC1.3	Mus musculus olfactory receptor 197 (Olfr197), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR183-3	MOR183-3
Mus musculus	RefSeq	ILMN_212756	ILMN_212756	OLFR197	NM_146484.1	NM_146484.1		258477	33239155	NM_146484.1	Olfr197	NP_666695.1	ILMN_1232267	005550500	S	158	CTCGCCTTCAAATACCCATGTACCTATTTCTTGGGTGTTTAGCTCTTGTT	16	-	59186100-59186149	16qC1.3	Mus musculus olfactory receptor 197 (Olfr197), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR183-3	MOR183-3
Mus musculus	RefSeq	ILMN_261623	ILMN_261623	STEAP2	NM_028734.2	NM_028734.2		74051	124249343	NM_028734.2	Steap2	NP_083010.2	ILMN_2797726	006280189	S	3013	GTGGGTAGTCCATAGTTGCCTGGAAACCCATAGTAGCACAAAGCCTCCCC				5qA1	Mus musculus six transmembrane epithelial antigen of prostate 2 (Steap2), mRNA. XM_900299 XM_905527 XM_919398 XM_919422 XM_919426 XM_919434 XM_919444 XM_979606 XM_979649 XM_979723 XM_979751 XM_979777 XM_979804	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	STMP; AI930049; PCANAP1; STAMP1; IPCA1; 4921538B17Rik; IPCA-1	STMP; AI930049; PCANAP1; STAMP1; IPCA1; 4921538B17Rik; IPCA-1
Mus musculus	RefSeq	ILMN_186651	ILMN_186651	ZFYVE20	NM_030081.2	NM_030081.2		78287	31541995	NM_030081.2	Zfyve20	NP_084357.2	ILMN_1234236	004810577	S	4842	GGCAGATCCCTTAGGTGTAGGTCCTGTTCATAGTGGACAGGCTTCTTGCT	6	-	92137034-92137083	6qD1	Mus musculus zinc finger, FYVE domain containing 20 (Zfyve20), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	5330426D11Rik	5330426D11Rik
Mus musculus	RefSeq	ILMN_214598	ILMN_214598	RPL23	NM_022891.1	NM_022891.1		65019	12584985	NM_022891.1	Rpl23	NP_075029.1	ILMN_2946482	000670176	S	745	CAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGGCCAGCCTGGTCTA	11	-	97593817-97593866	11qD	Mus musculus ribosomal protein L23 (Rpl23), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence ISA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	2810009A01Rik	2810009A01Rik
Mus musculus	RefSeq	ILMN_215428	ILMN_215428	ELF1	NM_007920.3	NM_007920.3		13709	118131095	NM_007920.3	Elf1	NP_031946.1	ILMN_2659380	003850601	S	3818	GGCTCTGAGGGCCAAAGAAGCAATGGGAGTCCTGAGCTAGTATAGCTGTG	14	+	79981884-79981933	14qD3	Mus musculus E74-like factor 1 (Elf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate, or extent of production of a cytokine [goid 1817] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Sts1; Elf-1; mElf-1; p70	Sts1; Elf-1; mElf-1; p70
Mus musculus	RefSeq	ILMN_200327	ILMN_200327	LOC386240	XM_359134.1	XM_359134.1			38081324	XM_359134.1	LOC386240		ILMN_1226088	000290681	S	765	CTCGGTCTTGTGCCTGTCCAGATCCTTGATGCCAGTGCTTTATGGAGAAG										
Mus musculus	MEEBO	ILMN_188669	ILMN_188669	TBP	scl51090.8.1_21				8850233	NM_013684	Tbp		ILMN_1234361	001440411	S	591	ATGGTGTGCACAGGAGCCAAGAGTGAAGAACAATCCAGACTAGCAGCAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [evidence TAS]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IDA]; The pronucleus originating from the spermatozoa that was involved in fertilization [goid 1940] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_188669	ILMN_188669	TBP	scl51090.8.1_21				8850233	NM_013684	Tbp		ILMN_2626740	005700653	S	592	TGGTGTGCACAGGAGCCAAGAGTGAAGAACAATCCAGACTAGCAGCAAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [evidence TAS]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IDA]; The pronucleus originating from the spermatozoa that was involved in fertilization [goid 1940] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	Riken	ILMN_202285	ILMN_202285	4921504I02RIK	ri|4921504I02|PX00013N03|AK014811|1939					AK014811	4921504I02Rik		ILMN_2548405	004590386	S	1496	CACACAAAGTTTGAATGACAAAGAGAAGTAGATGGTGGTAGGAAGAGTCG										
Mus musculus	RefSeq	ILMN_209128	ILMN_209128	MAP3K3	NM_011947.3	NM_011947.3		26406	146134424	NM_011947.3	Map3k3	NP_036077.1	ILMN_2592810	007050600	S	2907	CCTCAGCCCGACCTGTCCACTTGTCATCAACCTCATTCCCTTCTTGTTCC				11qE1	Mus musculus mitogen-activated protein kinase kinase kinase 3 (Map3k3), mRNA.		A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISO]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA4031; AW548911; MAPKKK3; mKIAA4031; Mekk3	KIAA4031; AW548911; MAPKKK3; mKIAA4031; Mekk3
Mus musculus	RefSeq	ILMN_184169	ILMN_247346	D19WSU162E	NM_146099.2	NM_146099.2		226178	68341986	NM_146099.2	D19Wsu162e	NP_666211.2	ILMN_2416424	003140167	S	3731	CTGAGCGGTCTGGGTGACGATATCCTGTGATTGTCCGGAAGACAGAGTGG	19	+	46731777-46731826	19qC3	Mus musculus DNA segment, Chr 19, Wayne State University 162, expressed (D19Wsu162e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC31104	MGC31104
Mus musculus	RefSeq	ILMN_210668	ILMN_313033	4932414J04RIK	XM_001471843.1	XM_001471843.1		237694	149261594	XM_001471843.1	4932414J04Rik	XP_001471893.1	ILMN_1255492	005570735	S	1962	CCTGACTGTCTTTTGGGAAGAACTTCAAGAAACATCCTCTTTCATCCATT	11	-	21404258-21404273:21405500-21405533	11qA3.1	PREDICTED: Mus musculus RIKEN cDNA 4932414J04 gene (4932414J04Rik), mRNA.			Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210668	ILMN_313033	4932414J04RIK	XM_001471843.1	XM_001471843.1		237694	149261594	XM_001471843.1	4932414J04Rik	XP_001471893.1	ILMN_1237480	007320603	S	2571	CCTTGTCCAAAGGACATTTGGTTTTTGTGGCATTCTTGTGGATGACACCG	11	-	21397089-21397138	11qA3.1	PREDICTED: Mus musculus RIKEN cDNA 4932414J04 gene (4932414J04Rik), mRNA.			Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_202698	ILMN_202698	6430503K07RIK	ri|6430503K07|PX00045A04|AK020097|477					AK020097	6430503K07Rik		ILMN_2551602	006180373	S	108	AGGCGAAGCAGAACGCTCAGGCATCGAGTCCTCCAAGCTCACAGCTGCTT										
Mus musculus	RefSeq	ILMN_207468	ILMN_207468	EGFR	NM_007912.4	NM_007912.4		13649	90403618	NM_007912.4	Egfr	NP_031938.1	ILMN_3052260	001770292	I	2489	AGTCTCCTCTTTTCCTCTCAGTAGCCCAAGGGGTCATGTCACAAACATGG	11	+	16787472-16787521	11qA2	Mus musculus epidermal growth factor receptor (Egfr), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence ISO]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IGI]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISO]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [evidence IDA]	wa-2; Erbb; 9030024J15Rik; AI552599; Errp; Wa5; wa2	wa-2; Erbb; 9030024J15Rik; AI552599; Errp; Wa5; wa2
Mus musculus	RefSeq	ILMN_207468	ILMN_207468	EGFR	NM_007912.4	NM_007912.4		13649	90403618	NM_007912.4	Egfr	NP_031938.1	ILMN_3128725	004540382	A	2124	ATGTCTGCCACCTATGCCACGCCAACTGTACCTATGGATGTGCTGGGCCA	11	+	16783580-16783616:16787144-16787156	11qA2	Mus musculus epidermal growth factor receptor (Egfr), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence ISO]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IGI]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISO]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [evidence IDA]	wa-2; Erbb; 9030024J15Rik; AI552599; Errp; Wa5; wa2	wa-2; Erbb; 9030024J15Rik; AI552599; Errp; Wa5; wa2
Mus musculus	RefSeq	ILMN_213427	ILMN_213427	OLFR1079	NM_146407.1	NM_146407.1		258402	33239157	NM_146407.1	Olfr1079	NP_666519.1	ILMN_1253560	004810274	S	569	TCTGCACAAATACAGATAAAATCGGACTGATAATTTTAATTTTATCTGCC	2	-	86378452-86378501	2qD	Mus musculus olfactory receptor 1079 (Olfr1079), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR189-1	MOR189-1
Mus musculus	Riken	ILMN_202161	ILMN_202161	3110038B19RIK	ri|3110038B19|ZX00071F15|AK014139|1148					AK014139	3110038B19Rik		ILMN_2547475	003990240	S	598	CAGTCTGTGAACCTGGCACTTTTTGGCACTCTGGTGCTGTCTGAGCACTG										
Mus musculus	MEEBO	ILMN_222340	ILMN_222340	TESC	scl27313.11.1_0	NM_021344.2			31981124	NM_021344.2	Tesc		ILMN_2748222	005550711	S	690	CATCGAGACCAAGATGCACATTCGTTTCCTCAACATGGAGACCATCGCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The regulation of the levels, transport, and metabolism of sodium ions within a cell or between a cell and its external environment [goid 6883] [evidence ISA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Stops, prevents or reduces the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19212] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]		
Mus musculus	RefSeq	ILMN_227240	ILMN_227240	PTPRM	NM_008984.1	NM_008984.1		19274	6679562	NM_008984.1	Ptprm	NP_033010.1	ILMN_2875876	002600367	S	4463	CAGGTGGACAAGTGGCAGGAGGAATACAATGGCGGCGAAGGCCCGACAGT	17	-	67032725-67032774	17qE1.1	Mus musculus protein tyrosine phosphatase, receptor type, M (Ptprm), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	RPTPmu; MGC90724; mKIAA4044; KIAA4044	RPTPmu; MGC90724; mKIAA4044; KIAA4044
Mus musculus	RefSeq	ILMN_222925	ILMN_222925	1300007F04RIK	NM_026185.4	NM_026185.4		67477	147902336	NM_026185.4	1300007F04Rik	NP_080461.3	ILMN_1234692	000110743	S	2517	GGTTTTGAGGAAGAATGCTGAAGGCCCAAGAACAATAAGCCATAGCTCCC				11qB5	Mus musculus RIKEN cDNA 1300007F04 gene (1300007F04Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200951	ILMN_200951	LOC385510	XM_358262.1	XM_358262.1			38087308	XM_358262.1	LOC385510		ILMN_1223498	006590537	S	909	AATGTGCAAGGTCAGGGAGGACGAGGAGCAGGTTCTGTTAGTTGCGCCCC										
Mus musculus	MEEBO	ILMN_193607	ILMN_193607	1700016L04RIK	scl38174.2_18						1700016L04Rik		ILMN_1231857	000580471	S	1	CCTCGCCCCTCATACATCAGTGGGAAGTCCACATGCTTTGAGAGGAGCAG										
Mus musculus	RefSeq	ILMN_190292	ILMN_231103	CYB5R2	NM_177216.3	NM_177216.3		320635	85662404	NM_177216.3	Cyb5r2	NP_796190.1	ILMN_2655465	000510164	S	899	GACATGATTTTTATCTACTAACACCTCCCACACTACTTAGCGGGTCCCTC	7	-	114893708-114893737:114893738-114893757	7qE3	Mus musculus cytochrome b5 reductase 2 (Cyb5r2), mRNA.		The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence IEA]	MGC130178; D630003K02Rik; MGC130177	MGC130178; D630003K02Rik; MGC130177
Mus musculus	RefSeq	ILMN_197967	ILMN_234566	LOC665946	XM_980465.1	XM_980465.1		665946	94400093	XM_980465.1	LOC665946	XP_985559.1	ILMN_2588070	001230463	S	6	CTGGCACTCACCAATCACAGTGACTCTCCACTGGCACTCACCAATCACAG	16	+	17860830-17860879		PREDICTED: Mus musculus similar to MoLTing defective family member (mlt-10) (LOC665946), mRNA.					
Mus musculus	RefSeq	ILMN_216099	ILMN_216099	SRXN1	NM_029688.4	NM_029688.4		76650	146149263	NM_029688.4	Srxn1	NP_083964.1	ILMN_1229994	002340431	S	637	GGCCTTGACCCTGAAGGAGTACCAGGAAGGAAGAAAGGAGATGGACTTGG				2qG3	Mus musculus sulfiredoxin 1 homolog (S. cerevisiae) (Srxn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: peroxiredoxin-(S-hydroxy-S-oxocysteine) + ATP + 2 R-SH <=> peroxiredoxin-(S-hydroxycysteine) + ADP + phosphate + R-S-S-R [goid 32542] [evidence IEA]	TX01; Srx; 1700127B04Rik; Npn3; AI854065; AW488194	TX01; Srx; 1700127B04Rik; Npn3; AI854065; AW488194
Mus musculus	RefSeq	ILMN_216099	ILMN_216099	SRXN1	NM_029688.4	NM_029688.4		76650	146149263	NM_029688.4	Srxn1	NP_083964.1	ILMN_2667346	002970189	S	1016	GTTCAAAGTTTCAGGACCCTGTTCTTTGCTTATTTGCACATGGTCACCTT				2qG3	Mus musculus sulfiredoxin 1 homolog (S. cerevisiae) (Srxn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: peroxiredoxin-(S-hydroxy-S-oxocysteine) + ATP + 2 R-SH <=> peroxiredoxin-(S-hydroxycysteine) + ADP + phosphate + R-S-S-R [goid 32542] [evidence IEA]	TX01; Srx; 1700127B04Rik; Npn3; AI854065; AW488194	TX01; Srx; 1700127B04Rik; Npn3; AI854065; AW488194
Mus musculus	RefSeq	ILMN_198158	ILMN_225734	EG631304	XM_988992.1	XM_988992.1		631304	94401873	XM_988992.1	EG631304	XP_994086.1	ILMN_1213968	006520086	S	1349	TCCAGGCTAGATCACCTCTGTCATTTATTCCCTTCTCAGCGGGGCCAAGG	17	+	32812883-32812931:32813248-32813248	17qB1	PREDICTED: Mus musculus predicted gene, EG631304 (EG631304), mRNA.					
Mus musculus	MEEBO	ILMN_195611	ILMN_195611	D15ERTD528E	scl052631.1_49						D15Ertd528e		ILMN_2517138	007100678	S	9	TAAGTGTGAGAGGTCAAGCCCTGGACTTGGGAGCCCTGGAGGGTGAGAAA										
Mus musculus	RefSeq	ILMN_215403	ILMN_215403	CCNB1	NM_172301.3	NM_172301.3		268697	118130025	NM_172301.3	Ccnb1	NP_758505.2	ILMN_2753497	002190164	S	1866	TGCCCCCAAGTCTCACTATCAACAGATAAGGGTGTATTCTTGTATATCCT	13	-	101549094-101549143	13qD1	Mus musculus cyclin B1 (Ccnb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC90915; Ccnb1-rs13; MGC18763; Cycb-4	MGC90915; Ccnb1-rs13; MGC18763; Cycb-4
Mus musculus	RefSeq	ILMN_215403	ILMN_215403	CCNB1	NM_172301.3	NM_172301.3		268697	118130025	NM_172301.3	Ccnb1	NP_758505.2	ILMN_2659052	007550156	S	1980	GTATTCCTATCAGCATTCCTTTCAATGCCTATATTGCATTTCCTAGTGTG	13	-	101548980-101549029	13qD1	Mus musculus cyclin B1 (Ccnb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC90915; Ccnb1-rs13; MGC18763; Cycb-4	MGC90915; Ccnb1-rs13; MGC18763; Cycb-4
Mus musculus	RefSeq	ILMN_213516	ILMN_213516	DHDDS	NM_026144.4	NM_026144.4		67422	146149290	NM_026144.4	Dhdds	NP_080420.2	ILMN_2691067	007100110	S	529	GCCCTTGGACCTCCAGGAGAAGATTGCGCATGCCATCCAGGCTACTAAGA				4qD3	Mus musculus dehydrodolichyl diphosphate synthase (Dhdds), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HDS; W91638; 3222401G21Rik; DS	HDS; W91638; 3222401G21Rik; DS
Mus musculus	RefSeq	ILMN_213516	ILMN_213516	DHDDS	NM_026144.4	NM_026144.4		67422	146149290	NM_026144.4	Dhdds	NP_080420.2	ILMN_2637845	001240044	S	2659	CAGAGCCCTACAATTAAGGCGGGAATGAGAGGCTGGAGGCAGCAAACGGA				4qD3	Mus musculus dehydrodolichyl diphosphate synthase (Dhdds), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HDS; W91638; 3222401G21Rik; DS	HDS; W91638; 3222401G21Rik; DS
Mus musculus	RefSeq	ILMN_218373	ILMN_218373	MYL1	NM_021285.1	NM_021285.1		17901	29789015	NM_021285.1	Myl1	NP_067260.1	ILMN_2878542	002490731	S	873	GATAATCTCAAGTCCACACACCACCGTTATCATCTACTTGGGTCCACAAC	1	-	66857551-66857600	1qC3	Mus musculus myosin, light polypeptide 1 (Myl1), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Mylf; AI325107; MLC1f; MLC3f	Mylf; AI325107; MLC1f; MLC3f
Mus musculus	RefSeq	ILMN_215107	ILMN_215107	POLD1	NM_011131.2	NM_011131.2		18971	31981550	NM_011131.2	Pold1	NP_035261.2	ILMN_2655577	005220358	S	3362	CGGCCCTGAGGCCTGGTGACCTGACACGGGACAAGGAATAAAGTTCAGAT	7	-	51788127-51788158:51788159-51788176	7qB4	Mus musculus polymerase (DNA directed), delta 1, catalytic subunit (Pold1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Correction of replication errors by DNA polymerase using a 3'-5' exonuclease activity [goid 45004] [evidence IMP]; Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template [goid 6287] [evidence IMP]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	125kDa	125kDa
Mus musculus	RefSeq	ILMN_210978	ILMN_210978	MC4R	NM_016977.3	NM_016977.3		17202	142367913	NM_016977.3	Mc4r	NP_058673.2	ILMN_2611237	003180288	S	1187	GAGTCTTTGTTGTCTGCTGGGCCCCGTTCTTTCTCCATTTACTGTTCTAC	18	-	67018890-67018939	18qE1	Mus musculus melanocortin 4 receptor (Mc4r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Behavior associated with the intake of food [goid 7631] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of bone resorption [goid 45780] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32868] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with melanocortin to initiate a change in cell activity [goid 4977] [evidence IEA]	Fatboy; Glu3	Fatboy; Glu3
Mus musculus	RefSeq	ILMN_203894	ILMN_255490	C230094A16RIK	NM_146016.2	NM_146016.2		237711	127140885	NM_146016.2	C230094A16Rik	NP_666128.2	ILMN_1220973	002760435	S	2440	GGAGATTTATCCCAGAAGCAGTCAGCAATGGCGTGTTGGAAACCACACCC	11	-	29733058-29733107	11qA3.3	Mus musculus RIKEN cDNA C230094A16 gene (C230094A16Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			MGC38936; RP23-176O5.5; 2900083P10Rik	MGC38936; RP23-176O5.5; 2900083P10Rik
Mus musculus	RefSeq	ILMN_190886	ILMN_255490	C230094A16RIK	NM_146016.2	NM_146016.2		237711	127140885	NM_146016.2	C230094A16Rik	NP_666128.2	ILMN_1242778	005720487	S	6780	GGGATGATGTAGCCCACAGATAAAATTTACATCCTCAATTACCCTAACCA	11	-	29646324-29646348:29646353-29646377	11qA3.3	Mus musculus RIKEN cDNA C230094A16 gene (C230094A16Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			MGC38936; RP23-176O5.5; 2900083P10Rik	MGC38936; RP23-176O5.5; 2900083P10Rik
Mus musculus	RefSeq	ILMN_186120	ILMN_255490	C230094A16RIK	NM_146016.2	NM_146016.2		237711	127140885	NM_146016.2	C230094A16Rik	NP_666128.2	ILMN_2432780	000160441	S	7247	CCGTGTTGCTACTTTCTGTGGAGCTGGACTCTTCTTTGCTGCTCACCTTA	11	-	29644245-29644294	11qA3.3	Mus musculus RIKEN cDNA C230094A16 gene (C230094A16Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			MGC38936; RP23-176O5.5; 2900083P10Rik	MGC38936; RP23-176O5.5; 2900083P10Rik
Mus musculus	MEEBO	ILMN_221721	ILMN_221721	SOX1	scl34072.1.1_326	NM_009233.1			6678068	NM_009233.1	Sox1		ILMN_2739469	005690768	S	1105	ACTCGCTGCCACAGCACTACCAGGGCGCGGGCGCGGGCGTCAACGGCACG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell [goid 21884] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain [goid 21879] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197317	ILMN_197317	LOC218580	XM_127540.2	XM_127540.2			38075111	XM_127540.2	LOC218580		ILMN_2527699	001050471	S	1261	TCCCTGGTAGCAGTATTAGGAGGTACAGTGGACTTTTCAACGTCCATAGG										
Mus musculus	RefSeq	ILMN_198000	ILMN_198000	LOC328639	XM_286749.2	XM_286749.2			38080085	XM_286749.2	LOC328639		ILMN_1243938	003390386	S	862	AATGGGCTGAAAGCTGGCCGCAGCAAGATAGAGGCTGGTACCTTTGGAAG										
Mus musculus	RefSeq	ILMN_200617	ILMN_200617	LOC384404	XM_357625.1	XM_357625.1			38084302	XM_357625.1	LOC384404		ILMN_1248554	002060066	S	4	CCCCCAAAGATTGGAGAGGTATTTGTCGTTCTGCCCTTCCTGGACCAATG										
Mus musculus	MEEBO	ILMN_188473	ILMN_188473	SCL0003774.1_10	scl0003774.1_10	AK034131.1			26329718	AK034131.1	scl0003774.1_10		ILMN_2452978	004760445	S	17	AGGACTTTTGGGGGGCGTCTGTGCTGTCCATGGGAAGAGCATGCATTGTG										
Mus musculus	MEEBO	ILMN_190833	ILMN_190833	1700041B20RIK	scl0073338.1_268				51706384	XM_485065	1700041B20Rik		ILMN_1230440	004040689	S	1	CCTGCTTTCCAGGTAAAAGGATGCGGTGATGCCTCTGTGCTGGTGGGAAT										
Mus musculus	RefSeq	ILMN_197959	ILMN_197959	LOC239683	XM_155821.3	XM_155821.3			38079841	XM_155821.3	LOC239683		ILMN_1213236	000630474	S	2068	GGTGTCTCCATCATGCCTAGGGTCTCATCAACAGGGCAAGTCACTCTGAG										
Mus musculus	RefSeq	ILMN_199999	ILMN_199999	LOC384169	XM_357463.1	XM_357463.1			38079619	XM_357463.1	LOC384169		ILMN_1240982	005860070	S	3	GGGACATCTTCACTGCATTGGAAATACTTTTTTCAAGTCTCAGAACTGGG										
Mus musculus	Riken	ILMN_204452	ILMN_204452	A830083H19RIK	ri|A830083H19|PX00156I14|AK044043|3004					AK044043	A830083H19Rik		ILMN_2565089	001580228	S	2814	CCCTTTCAAATCTGCAGCTCACAAGAACACCCCATGAGCAACAACCCATC										
Mus musculus	Riken	ILMN_204799	ILMN_204799	4833429C11RIK	ri|4833429C11|PX00028N11|AK029392|2557					AK029392	4833429C11Rik		ILMN_1245896	004540026	S	2318	TCTAAGGGAAAAGGCCAGGAATGAGGTGGGGTGACTGACATCTCCATGCC										
Mus musculus	RefSeq	ILMN_187123	ILMN_187123	VPS39	NM_147153.2	NM_147153.2		269338	30578430	NM_147153.2	Vps39	NP_671495.1	ILMN_3129752	002690445	A	3135	CTACACAGCTTCACAAGATTCCCCAGCATGGTGGCCTGGAGAGTCCCATG	2	-	120143369-120143418	2qE5	Mus musculus vacuolar protein sorting 39 (yeast) (Vps39), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]	A230065P22Rik; AW743070; Vam6; Vam6P; mVam6	A230065P22Rik; AW743070; Vam6; Vam6P; mVam6
Mus musculus	RefSeq	ILMN_194182	ILMN_244441	4933407C03RIK	XM_001004724.2	XM_001004724.2		74440	149259104	XM_001004724.2	4933407C03Rik	XP_001004724.1	ILMN_1248994	001710176	S	3868	TCTTATTCGATGGAGACCATGCTTCGGTTGTTTTATACTTTGCCAGGTAA	8	+	119984819-119984868	8qE1	PREDICTED: Mus musculus RIKEN cDNA 4933407C03 gene, transcript variant 6 (4933407C03Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	Riken	ILMN_201914	ILMN_201914	4933428G20RIK	ri|4933428G20|PX00021D13|AK016967|1425					AK016967	4933428G20Rik		ILMN_2545583	000620603	S	1127	CTCAAGAAGTGGCAGCTTGATGACAGGGCTCATGTCCTCCATGAGTGGGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_220208	ILMN_220208	INTS9	NM_153414.3	NM_153414.3		210925	142371690	NM_153414.3	Ints9	NP_700463.2	ILMN_2767949	000520240	S	1815	CGGGCTGAGGTCCTTGCCCTGCCCTTCAAACGACGCTATGAGAAAATTGA	14	+	65652870-65652919	14qD1	Mus musculus integrator complex subunit 9 (Ints9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			BC028953; D14Ertd231e	BC028953; D14Ertd231e
Mus musculus	RefSeq	ILMN_220208	ILMN_220208	INTS9	NM_153414.3	NM_153414.3		210925	142371690	NM_153414.3	Ints9	NP_700463.2	ILMN_1213745	002030253	S	2029	ACGAGGACATTCCTGACTGCAAAGTACTGAAGCCTCTGCTGAGTGGCTCC	14	+	65656235-65656284	14qD1	Mus musculus integrator complex subunit 9 (Ints9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			BC028953; D14Ertd231e	BC028953; D14Ertd231e
Mus musculus	MEEBO	ILMN_185575	ILMN_185575	UBR1	scl18771.47_93				6678490	NM_009461	Ubr1		ILMN_1225124	001690014	S	19	GCTCATTTCTGCCTTAGTCATCTGGCCCCCATTTGCCACAGGATAAAGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IGI]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence IGI]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IGI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_193695	ILMN_233237	4933421E11RIK	NM_001039488.1	NM_001039488.1		321000	87162473	NM_001039488.1	4933421E11Rik	NP_001034577.1	ILMN_2499579	004260338	S	3140	ATTTGAGCATTTTGTATAGGGTTTCTGTTAAATGTTTTCAACTAAATTCC	3	+	106539275-106539324	3qF2.3	Mus musculus RIKEN cDNA 4933421E11 gene (4933421E11Rik), transcript variant 1, mRNA.				AI450568; 2010012G17Rik; Rif1	AI450568; 2010012G17Rik; Rif1
Mus musculus	RefSeq	ILMN_186137	ILMN_233237	4933421E11RIK	NM_001039488.1	NM_001039488.1		321000	87162473	NM_001039488.1	4933421E11Rik	NP_001034577.1	ILMN_1221212	003360609	S	1816	CTCGTCCAGAACATAGAGAAAATATGTTCCTCTGTTGATGCAGCAACTGT	3	+	106535971-106536020	3qF2.3	Mus musculus RIKEN cDNA 4933421E11 gene (4933421E11Rik), transcript variant 1, mRNA.				AI450568; 2010012G17Rik; Rif1	AI450568; 2010012G17Rik; Rif1
Mus musculus	RefSeq	ILMN_186137	ILMN_233237	4933421E11RIK	NM_001039488.1	NM_001039488.1		321000	87162473	NM_001039488.1	4933421E11Rik	NP_001034577.1	ILMN_2646836	001050037	S	1430	GGTTGAATGAAAAGGGGACATGCGGTCTGCCATCAAAAATTGACCAGCAG	3	+	106535585-106535634	3qF2.3	Mus musculus RIKEN cDNA 4933421E11 gene (4933421E11Rik), transcript variant 1, mRNA.				AI450568; 2010012G17Rik; Rif1	AI450568; 2010012G17Rik; Rif1
Mus musculus	RefSeq	ILMN_236214	ILMN_236214	KLKB1	NM_008455.1	NM_008455.1		16621	6680583	NM_008455.1	Klkb1	NP_032481.1	ILMN_2924942	006060326	S	2548	ACCCAGCTGGCTTTACCACCTGCCCTCAAGGCAAACTAGAGCTCCAGGAT	8	-	46355180-46355229	8qB1.1	Mus musculus kallikrein B, plasma 1 (Klkb1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	An ongoing process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, resulting in the removal of small blood clots [goid 42730] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Kal-3; APS; Kal3; Klk3	Kal-3; APS; Kal3; Klk3
Mus musculus	RefSeq	ILMN_198187	ILMN_198187	LOC381105	XM_355021.1	XM_355021.1			38082612	XM_355021.1	LOC381105		ILMN_1218842	000160487	S	286	GGAACCGCAGACTGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACC										
Mus musculus	MEEBO	ILMN_185329	ILMN_185329	ZDHHC6	scl0066980.1_38	NM_025883.2			31544055	NM_025883.2	Zdhhc6		ILMN_2426132	005700524	S	3	TGGTCTCTTTTGTCTAACGGTTCTATGGACTTACATGCATGTTGGTGCGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210505	ILMN_210505	CLRN3	NM_178669.5	NM_178669.5		212070	142352986	NM_178669.5	Clrn3	NP_848784.1	ILMN_2606288	006270328	S	1553	AGGCTGCCACAGTGACAACTGACAGACCTGAAAAGTGACCTCCTTTCATG	7	-	142704851-142704900	7qF3	Mus musculus clarin 3 (Clrn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC37614; Tmem12; AI649392	MGC37614; Tmem12; AI649392
Mus musculus	MEEBO	ILMN_209901	ILMN_209901	COX4I1	scl33243.5.1_27	NM_009941.1			6753497	NM_009941.1	Cox4i1		ILMN_2600274	001070762	S	608	GGCATGCTGGAAGCTGCCGTATCCAATGGTCCATGCTAATAAAAGACCAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_185339	ILMN_241125	ZMYM3	NM_019831.2	NM_019831.2		56364	118130614	NM_019831.2	Zmym3	NP_062805.1	ILMN_2483414	001050746	S	1052	CCCTAGAGCCTGGACCAGGGTGTCAAACCCCTGAGGTGATGCCACCTGAT	X	-	98613894-98613943	XqD	Mus musculus zinc finger, MYM-type 3 (Zmym3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC118059; Zfp261; AW122925; 9030216B10Rik	MGC118059; Zfp261; AW122925; 9030216B10Rik
Mus musculus	RefSeq	ILMN_185339	ILMN_241125	ZMYM3	NM_019831.2	NM_019831.2		56364	118130614	NM_019831.2	Zmym3	NP_062805.1	ILMN_1219447	003450072	S	5954	GCCTGTTCCTTCAGTGAGCCATGCCCACCCTTGTGTTGTAGTGAGAAACT	X	-	98599776-98599825	XqD	Mus musculus zinc finger, MYM-type 3 (Zmym3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC118059; Zfp261; AW122925; 9030216B10Rik	MGC118059; Zfp261; AW122925; 9030216B10Rik
Mus musculus	MEEBO	ILMN_193151	ILMN_193151	NRG1	scl00211323.1_323				51764013	XM_486093	Nrg1		ILMN_2494532	006840746	S	8	TATGTGATCGATTAGTTATGTCCCTGATCACCCTATTAATATTTTTGATC						The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The disaggregation of a protein complex into its constituent components, occurring at the level of an individual cell. Protein complexes may have other associated non-protein prosthetic groups, such as nucleic acids, metal ions or carbohydrate groups [goid 43624] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The biosynthesis of a synapse [goid 7416] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IDA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]	The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence ISO]; Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [evidence IDA]; Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [evidence IGI]		
Mus musculus	RefSeq	ILMN_198341	ILMN_198341	LOC380618	XM_358364.1	XM_358364.1			38084034	XM_358364.1	LOC380618		ILMN_1251363	000510133	S	69	CCTAGGAGACATTCCAAGATTTGGTGGGTGTAACTGAGTTCCTTGGGCCC										
Mus musculus	RefSeq	ILMN_213758	ILMN_213758	PRL8A9	NM_023332.3	NM_023332.3		67310	141802878	NM_023332.3	Prl8a9	NP_075821.1	ILMN_1256562	000780598	S	660	CACAGGGCAAACATTATAAATTGTTGGCAATGTTTAACCTTTCCAACTGC	13	-	27650094-27650143	13qA3.1	Mus musculus prolactin family8, subfamily a, member 9 (Prl8a9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	1600019F10Rik; PLP-Cbeta; Prlpc2	1600019F10Rik; PLP-Cbeta; Prlpc2
Mus musculus	RefSeq	ILMN_210966	ILMN_210966	2310001A20RIK	NM_027977.1	NM_027977.1		71881	21313667	NM_027977.1	2310001A20Rik	NP_082253.1	ILMN_2799667	001430170	S	1934	GTGGCCAGGAGGATTTCATTGGGTTTCTTTCTGACTGCCTTCTCCACTGG	2	-	150274728-150274777	2qG3	Mus musculus RIKEN cDNA 2310001A20 gene (2310001A20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the reaction: 3-alpha(S)-strictosidine = tryptamine + secologanin [goid 16844] [evidence IEA]	AI314817	AI314817
Mus musculus	Riken	ILMN_204180	ILMN_204180	A730081F20RIK	ri|A730081F20|PX00153O23|AK043286|2079					AK043286	A730081F20Rik		ILMN_2562988	000830372	S	1771	TCCAAACAGGGTTCAGGGCAAGAGGACAGGCTCCTTTTCTGCTGTGGCTC										
Mus musculus	Riken	ILMN_207318	ILMN_207318	SDFR1	ri|4921539A16|PX00639E17|AK076624|1401					AK076624	Sdfr1		ILMN_2586696	005810082	S	1268	GCTGCTCCAGGGTCAGGGAGGGCTGCAGAGAAACATGCAGTTAGAAAAGG										
Mus musculus	RefSeq	ILMN_210180	ILMN_210180	OLFR1383	NM_207574.1	NM_207574.1		404337	46430595	NM_207574.1	Olfr1383	NP_997457.1	ILMN_1218320	006450154	S	849	GCTGAACCCTCTGATTTATACCCTAAGAAACAAGGATGTGAAGGGGGCTC	11	+	49338075-49338124	11qB1.2	Mus musculus olfactory receptor 1383 (Olfr1383), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC157513; MOR256-56	MGC157513; MOR256-56
Mus musculus	MEEBO	ILMN_212212	ILMN_212212	9030605H24RIK	scl41681.5.1_233	NM_176999.2			31342557	NM_176999.2	9030605H24Rik		ILMN_2624038	007210220	S	3327	CCAGTCCTCCAGGCCCAGATCCTCAGCTAACTATGAATACACTGGGAAGG										
Mus musculus	RefSeq	ILMN_212783	ILMN_212783	OLFR1313	NM_207150.1	NM_207150.1		258257	46391058	NM_207150.1	Olfr1313	NP_997033.1	ILMN_2630264	003830193	S	692	GTTCCTACAAAGCGCTGTCTACACTTTCAGCTCACGTGACTGTAGTAGTC	2	-	111911997-111912046	2qE3	Mus musculus olfactory receptor 1313 (Olfr1313), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR245-23; MGC157511	MOR245-23; MGC157511
Mus musculus	RefSeq	ILMN_223624	ILMN_223624	DNAJB5	NM_019874.3	NM_019874.3		56323	40254371	NM_019874.3	Dnajb5	NP_063927.1	ILMN_2970436	000430722	S	1995	CTCAGGGCCTAGCCACCCCAAACTTCCAAGCCCCACTTTTGTGATATGTG	4	+	42966336-42966385	4qA5	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 5 (Dnajb5), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence ISS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	AI462558; Hsc40; 1110058L06Rik; Hsp40-3	AI462558; Hsc40; 1110058L06Rik; Hsp40-3
Mus musculus	RefSeq	ILMN_239308	ILMN_239308	DLX2	NM_010054.1	NM_010054.1		13392	6753645	NM_010054.1	Dlx2	NP_034184.1	ILMN_2860959	006330373	S	2117	CGAACTTCGATGCAGAGTTTGTAAATAAGGGTGTCTGTGCAGATTTCCCC	2	-	71381758-71381807	2qC2	Mus musculus distal-less homeobox 2 (Dlx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process by which the anatomical structures of branches in a nerve are generated and organized. Morphogenesis pertains to the creation of form. This term refers to an anatomical structure (nerve) not a cell (neuron) [goid 48755] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte differentiation [goid 48715] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex [goid 21772] [evidence IMP]; The process whereby the developmental fate of a neuroblast becomes restricted such that it will develop into a GABAergic interneuron residing in the cerebral cortex [goid 21893] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain [goid 21882] [evidence IGI]	Interacting selectively with single-stranded RNA [goid 3727] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Tes-1; Dlx-2; AW121999	Tes-1; Dlx-2; AW121999
Mus musculus	MEEBO	ILMN_193289	ILMN_193289	4833419K08RIK	scl51377.2.1_209						4833419K08Rik		ILMN_1250504	004050044	S	3	GACTGCAGGCAAACCCCTGGTCTTTAATGGAACCACCCTACACGTGCTGT										
Mus musculus	RefSeq	ILMN_219210	ILMN_219210	PPP2R2C	NM_172994.2	NM_172994.2		269643	42475972	NM_172994.2	Ppp2r2c	NP_766582.1	ILMN_1228308	007610053	S	3606	CACCCAGGTTCAGAGCGGACTGCTAATAATAATGTGTGTATTGATCGAGG	5	+	37345892-37345941	5qB3	Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform (Ppp2r2c), mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]	IMYPNO; 6330548O06Rik; IMYPNO1; PR52	IMYPNO; 6330548O06Rik; IMYPNO1; PR52
Mus musculus	RefSeq	ILMN_219210	ILMN_219210	PPP2R2C	NM_172994.2	NM_172994.2		269643	42475972	NM_172994.2	Ppp2r2c	NP_766582.1	ILMN_2760691	002000017	S	3622	GACTGCTAATAATAATGTGTGTATTGATCGAGGAAAAAGTGCGGAGGGGG	5	+	37345908-37345957	5qB3	Mus musculus protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform (Ppp2r2c), mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]	IMYPNO; 6330548O06Rik; IMYPNO1; PR52	IMYPNO; 6330548O06Rik; IMYPNO1; PR52
Mus musculus	Riken	ILMN_207158	ILMN_207158	F730038M08RIK	ri|F730038M08|PL00003N07|AK089486|3995					AK089486	F730038M08Rik		ILMN_1227868	004920017	S	3883	CCCAGTGCTATTGCTAGGGCTGTGGTTTGAGGCCAACCTGTCCTACACAG										
Mus musculus	RefSeq	ILMN_210735	ILMN_210735	B3GNT9	NM_178879.3	NM_178879.3		97440	111160293	NM_178879.3	B3gnt9	NP_849210.1	ILMN_2608622	003710608	S	2064	GACGAAGGTCCAAATGGGAAGACACCTGTCAAATCAGTCATGGGAGTGCC	8	-	107776750-107776799	8qD3	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 (B3gnt9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC117964; C76565	MGC117964; C76565
Mus musculus	RefSeq	ILMN_211806	ILMN_210735	B3GNT9	NM_178879.3	NM_178879.3		97440	111160293	NM_178879.3	B3gnt9	NP_849210.1	ILMN_2718104	000940035	S	2322	TTTATCCCATTTTTAATATTTTGGTCTAGCAACTTGTGATACATAGATGA				8qD3	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 (B3gnt9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC117964; C76565	MGC117964; C76565
Mus musculus	RefSeq	ILMN_210735	ILMN_210735	B3GNT9	NM_178879.3	NM_178879.3		97440	111160293	NM_178879.3	B3gnt9	NP_849210.1	ILMN_2707107	007000605	S	2152	GCTGGGGCAGGTCCCCTGCACATTCATCATGAACTATACAAGATGAGGCT	8	-	107776662-107776711	8qD3	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 (B3gnt9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC117964; C76565	MGC117964; C76565
Mus musculus	RefSeq	ILMN_211806	ILMN_210735	B3GNT9	NM_178879.3	NM_178879.3		97440	111160293	NM_178879.3	B3gnt9	NP_849210.1	ILMN_2665708	004670367	S	2199	CCTCATCTTGTATAGTTCATGATGAATGTGCAGGGGACCTGCCCCAGCTG	8	-	107776615-107776664	8qD3	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 (B3gnt9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC117964; C76565	MGC117964; C76565
Mus musculus	RefSeq	ILMN_210735	ILMN_210735	B3GNT9	NM_178879.3	NM_178879.3		97440	111160293	NM_178879.3	B3gnt9	NP_849210.1	ILMN_2740126	001980475	S	2275	ATCTATGTATCACAAGTTGCTAGACCAAAATATTAAAAATGGGATAAAAT	8	-	107776539-107776588	8qD3	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 (B3gnt9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC117964; C76565	MGC117964; C76565
Mus musculus	RefSeq	ILMN_211806	ILMN_210735	B3GNT9	NM_178879.3	NM_178879.3		97440	111160293	NM_178879.3	B3gnt9	NP_849210.1	ILMN_2619697	006840546	S	2001	AGAGGAGACTTCCTCGTCCCCCTTCCAATAAAGCACCTATGCCCACAGTG	8	-	107776813-107776862	8qD3	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 (B3gnt9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC117964; C76565	MGC117964; C76565
Mus musculus	RefSeq	ILMN_193636	ILMN_226504	PUS10	NM_028304.2	NM_028304.2		74467	75905501	NM_028304.2	Pus10	NP_082580.1	ILMN_2685569	000830538	S	1987	GGCTCTTTGATGAACGTGACTGCAGACATTCTTGAGCTGGATGTGGAGTC	11	+	23629027-23629074:23631321-23631322	11qA3.2	Mus musculus pseudouridylate synthase 10 (Pus10), transcript variant 3, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	C77560; RP23-164N15.2; 2810013G11Rik; AU014648; 4933435A13Rik	C77560; RP23-164N15.2; 2810013G11Rik; AU014648; 4933435A13Rik
Mus musculus	RefSeq	ILMN_226504	ILMN_226504	PUS10	NM_028304.2	NM_028304.2		74467	75905501	NM_028304.2	Pus10	NP_082580.1	ILMN_3075113	002360195	I	123	TTTGAGTAGGGGCTCATCGACGTTTCTGGCAGCAGCTACTACGACCTAGG	11	+	23566098-23566147	11qA3.2	Mus musculus pseudouridylate synthase 10 (Pus10), transcript variant 3, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	C77560; RP23-164N15.2; 2810013G11Rik; AU014648; 4933435A13Rik	C77560; RP23-164N15.2; 2810013G11Rik; AU014648; 4933435A13Rik
Mus musculus	RefSeq	ILMN_193636	ILMN_226504	PUS10	NM_028304.2	NM_028304.2		74467	75905501	NM_028304.2	Pus10	NP_082580.1	ILMN_1253031	006420435	S	3373	CAGGAAGATGTTTTTGATTGCGATGAAAGGGCAGCCTGCTCCTTTGAAAC	11	+	23632659-23632708	11qA3.2	Mus musculus pseudouridylate synthase 10 (Pus10), transcript variant 3, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	C77560; RP23-164N15.2; 2810013G11Rik; AU014648; 4933435A13Rik	C77560; RP23-164N15.2; 2810013G11Rik; AU014648; 4933435A13Rik
Mus musculus	MEEBO	ILMN_216195	ILMN_216195	1110034A24RIK	scl42395.4_703	NM_027269.2			31560101	NM_027269.2	1110034A24Rik		ILMN_1229416	007550494	S	1942	GCTGGGTTAAAGATACTTAGTTGGACTACAAGTAGATCCTGGGTTTGTGT										
Mus musculus	RefSeq	ILMN_220601	ILMN_220601	SYT10	NM_018803.1	NM_018803.1		54526	9055357	NM_018803.1	Syt10	NP_061273.1	ILMN_2724250	002320068	S	1671	ACTTCTTCATTTAAAATATACCCATGATAATTAATAACTTGATGCATAAT	15	-	89612857-89612906	15qE3	Mus musculus synaptotagmin X (Syt10), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223714	ILMN_223714	ANKRD45	XM_355251.4	XM_355251.4		73844	94364465	XM_355251.4	Ankrd45	XP_355251.4	ILMN_1240591	000840451	S	1013	GTGCCTTTTACAGATGCCACATGGTGTAGAAGGCTACATTACATTTCAGT	1	+	163004448-163004497	1qH2.1	PREDICTED: Mus musculus ankyrin repeat domain 45, transcript variant 1 (Ankrd45), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187728	ILMN_187728	C330025O08RIK	scl078698.2_10						C330025O08Rik		ILMN_2446610	002470639	S	19	GCTTTTTGGCAATAAAAGAAAGTTGGGATATCTTTGAACTGTAAAACCTA										
Mus musculus	RefSeq	ILMN_185560	ILMN_244020	9530059O14RIK	XM_982329.2	XM_982329.2		319626	149260358	XM_982329.2	9530059O14Rik	XP_987423.1	ILMN_1217735	006380468	S	303	CGTGCTGGGCTTCTCTGCGGCGGAAGTCTGGACCACAGATTGTGACTTCT	9	+	122481820-122481869	9qF4	PREDICTED: Mus musculus RIKEN cDNA 9530059O14 gene (9530059O14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217819	ILMN_217819	ARS2	NM_031405.1	NM_031405.1		83701	13937394	NM_031405.1	Ars2	NP_113582.1	ILMN_1242239	004810131	S	2567	ACCCAAGGGCCATAGTGGAGTATCGGGACCTGGATGCCCCGGATGATGTT	5	-	137739965-137740014	5qG2	Mus musculus arsenate resistance protein 2 (Ars2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ASR2B; ASR2D; ASR2A; Asr2; ASR2C	ASR2B; ASR2D; ASR2A; Asr2; ASR2C
Mus musculus	RefSeq	ILMN_217819	ILMN_217819	ARS2	NM_031405.1	NM_031405.1		83701	13937394	NM_031405.1	Ars2	NP_113582.1	ILMN_1225615	001740575	S	2569	CCAAGGGCCATAGTGGAGTATCGGGACCTGGATGCCCCGGATGATGTTGA	5	-	137739963-137740012	5qG2	Mus musculus arsenate resistance protein 2 (Ars2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ASR2B; ASR2D; ASR2A; Asr2; ASR2C	ASR2B; ASR2D; ASR2A; Asr2; ASR2C
Mus musculus	RefSeq	ILMN_217819	ILMN_217819	ARS2	NM_031405.1	NM_031405.1		83701	13937394	NM_031405.1	Ars2	NP_113582.1	ILMN_2698361	001470356	S	2487	TGCCGGCCGTGGGAACTATGATGCTTTTCGAGGCCAAGGCGGTTATCCTG	5	-	137740045-137740094	5qG2	Mus musculus arsenate resistance protein 2 (Ars2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ASR2B; ASR2D; ASR2A; Asr2; ASR2C	ASR2B; ASR2D; ASR2A; Asr2; ASR2C
Mus musculus	RefSeq	ILMN_222141	ILMN_222141	PCDHB11	NM_053136.3	NM_053136.3		93882	148747867	NM_053136.3	Pcdhb11	NP_444366.3	ILMN_1224410	003830228	S	3059	GGTGTTAAGACTCTAAGAGTATAATCAGTGGTAGATCATGCATGTCTGCC				18qB3	Mus musculus protocadherin beta 11 (Pcdhb11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbK; Pcdhb5E	PcdhbK; Pcdhb5E
Mus musculus	MEEBO	ILMN_211756	ILMN_211756	FBXO40	scl48496.6_388	XM_156082.3			38079785	XM_156082.3	Fbxo40		ILMN_2619204	000510528	S	4482	GCCAGCAGAGGCTGAACTGCCTTAATCTGGATGTCACCCAACCCTGCTAT							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_204588	ILMN_204588	C130034A22RIK	ri|C130034A22|PX00169A03|AK048090|3456					AK048090	C130034A22Rik		ILMN_1246589	002070634	S	3234	GGGCCTGCGAACTCTTTGAGGGAAATGTCTGAGGAGCCTGGAAACCAATG										
Mus musculus	RefSeq	ILMN_240441	ILMN_240441	OLFR485	NM_001011810.1	NM_001011810.1		258041	58801385	NM_001011810.1	Olfr485	NP_001011810.1	ILMN_2915320	003140372	S	812	CTTACTCCGGGGACCAGAACAAGGTGGTGTCTGTGTTCTACACGGTAGCG	7	-	115302524-115302573	7qE3	Mus musculus olfactory receptor 485 (Olfr485), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-30P	MOR204-30P
Mus musculus	RefSeq	ILMN_196636	ILMN_255658	E330034G19RIK	NM_001033214.2	NM_001033214.2		105418	142367336	NM_001033214.2	E330034G19Rik	NP_001028386.1	ILMN_2762019	001340470	S	1315	TTGTGTTTGGTTTTCTGTTTGGAGTTTTGCTCTTAGATGTTTTGGTTTTC	14	+	25129004-25129053	14qA3	Mus musculus RIKEN cDNA E330034G19 gene (E330034G19Rik), mRNA.				AA415275	AA415275
Mus musculus	RefSeq	ILMN_207324	ILMN_234463	LIN7A	NM_001033223.2	NM_001033223.2		108030	86991443	NM_001033223.2	Lin7a	NP_001028395.1	ILMN_1213160	004390647	S	217	GACCTCAGTGGCAGCCCAGAGTCTAGAACCAGTACTACTCACCAGGCAAC	10	+	106817315-106817359:106819560-106819564	10qD1	Mus musculus lin-7 homolog A (C. elegans) (Lin7a), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	AI848705; MGC102231; LIN-7A; Veli; Veli1; TIP-33; MALS-1	AI848705; MGC102231; LIN-7A; Veli; Veli1; TIP-33; MALS-1
Mus musculus	RefSeq	ILMN_199254	ILMN_199254	LOC266459	XM_181357.3	XM_181357.3			38093502	XM_181357.3	LOC266459		ILMN_2534585	000050039	S	156	TGATGGTGTAAGGAGGCTGTGCCACATAAGAGGGAAGTTGAGAAAAAAGG										
Mus musculus	RefSeq	ILMN_212136	ILMN_212136	OCM	NM_033039.2	NM_033039.2		18261	145279225	NM_033039.2	Ocm	NP_149028.2	ILMN_1233351	006180050	S	474	GAAGAAAGAGAGGAAGGGGCATTCTGCCAGAAGGATTCAAAAGCCCTGGG				5qG2	Mus musculus oncomodulin (Ocm), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	Riken	ILMN_203956	ILMN_203956	A430083F12RIK	ri|A430083F12|PX00138I12|AK040286|1343					AK040286	A430083F12Rik		ILMN_1253993	002900424	S	1109	GCTCATAGCAGTCCATCCAAAGGAGCTGGGACCATTACCAGGGCAGAGTC										
Mus musculus	RefSeq	ILMN_184382	ILMN_237196	LOC677094	XR_005010.1	XR_005010.1		677094	94374586	XR_005010.1	LOC677094		ILMN_1231610	006770543	S	860	ACTATCACTGCAAGGACTGCAAAATCCGGTGGGAGAGCGCCTATGTGTGG					PREDICTED: Mus musculus similar to zygote arrest 1 (LOC677094), misc RNA.					
Mus musculus	RefSeq	ILMN_219287	ILMN_221060	SPATA3	NM_027029.1	NM_027029.1		70060	22208835	NM_027029.1	Spata3	NP_081305.1	ILMN_2751239	001090546	S	491	TGCCATAGCCGAATCTTTGATGTCCTCCTACCTCGGGACTGGTCATCCAT	1	+	87920988-87921037	1qC5	Mus musculus spermatogenesis associated 3 (Spata3), transcript variant 1, mRNA.				Mtsarg1; 1700029H01Rik; 1700011N12Rik; 4930424D10Rik; Tsarg1	Mtsarg1; 1700029H01Rik; 1700011N12Rik; 4930424D10Rik; Tsarg1
Mus musculus	RefSeq	ILMN_221060	ILMN_221060	SPATA3	NM_027029.1	NM_027029.1		70060	22208835	NM_027029.1	Spata3	NP_081305.1	ILMN_1221195	000780017	S	650	CTGGTTGGCAACTGTGTGTAACTTCCTCCAAACATCATAGGCTTTTCAAA	1	+	87921147-87921196	1qC5	Mus musculus spermatogenesis associated 3 (Spata3), transcript variant 1, mRNA.				Mtsarg1; 1700029H01Rik; 1700011N12Rik; 4930424D10Rik; Tsarg1	Mtsarg1; 1700029H01Rik; 1700011N12Rik; 4930424D10Rik; Tsarg1
Mus musculus	RefSeq	ILMN_208918	ILMN_208918	RGS20	NM_021374.3	NM_021374.3		58175	142372967	NM_021374.3	Rgs20	NP_067349.2	ILMN_2590789	003830095	S	1	ATGCGCACGGCCAACGGAGGCCCGAGGGCCAGAGCTTCCCCTTCGGCTAG	1	-	5009410-5009459	1qA1	Mus musculus regulator of G-protein signaling 20 (Rgs20), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Rgsz1; 2900073E09Rik; MGC151302; MGC151306	Rgsz1; 2900073E09Rik; MGC151302; MGC151306
Mus musculus	RefSeq	ILMN_208918	ILMN_208918	RGS20	NM_021374.3	NM_021374.3		58175	142372967	NM_021374.3	Rgs20	NP_067349.2	ILMN_1233067	005130541	S	862	GCTATAGATTCACAATGGAAACTACAACTGCCTTTAGTGATACTTATCAG	1	-	4900363-4900412	1qA1	Mus musculus regulator of G-protein signaling 20 (Rgs20), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Rgsz1; 2900073E09Rik; MGC151302; MGC151306	Rgsz1; 2900073E09Rik; MGC151302; MGC151306
Mus musculus	MEEBO	ILMN_220686	ILMN_220686	1110008B24RIK	scl073736.7_23	XM_177016.2			38079232	XM_177016.2	1110008B24Rik		ILMN_2725317	005390605	S	586	ACCGTGACCTCAAACGAAGAATCCGGAAGATCCCTGGCGTCCCTATCATG										
Mus musculus	Riken	ILMN_202999	ILMN_202999	4732494K09RIK	ri|4732494K09|PX00052J10|AK029122|3034					AK029122	4732494K09Rik		ILMN_1229441	002680706	S	2798	GGGCAGCAACTTGCAGTGTATTGCTCTTTGGCAGTGAGACTCAGCCTCGG										
Mus musculus	Riken	ILMN_204471	ILMN_204471	B130017M24RIK	ri|B130017M24|PX00157H22|AK044984|2964					AK044984	B130017M24Rik		ILMN_2565235	003140367	S	1115	GACTGTAAGTCTCTTCGTCCCAACCCAGGCTGTGGGTGCTATCATCGGGA										
Mus musculus	RefSeq	ILMN_210599	ILMN_210599	FKBP11	NM_024169.3	NM_024169.3		66120	85861215	NM_024169.3	Fkbp11	NP_077131.2	ILMN_1224635	001050671	S	512	GGTGCAGTACGATGTGGAGCTGATCGCTTTGATTCGAGCCAACTACTGGC	15	-	98554973-98555022	15qF1	Mus musculus FK506 binding protein 11 (Fkbp11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	1110002O23Rik	1110002O23Rik
Mus musculus	RefSeq	ILMN_260554	ILMN_260554	DEFB42	NM_001034910.1	NM_001034910.1		619548	84370321	NM_001034910.1	Defb42	NP_001030082.1	ILMN_2876755	001240168	S	236	GGTCGCTGTTCGATCGGGAATAAGGGCATATCCTTTGAGACGTGCACCGC	14	+	62002338-62002387	14qD1	Mus musculus defensin beta 42 (Defb42), mRNA.				Defb44	Defb44
Mus musculus	RefSeq	ILMN_216376	ILMN_216376	ITM2B	NM_008410.1	NM_008410.1		16432	6680501	NM_008410.1	Itm2b	NP_032436.1	ILMN_2782082	004060575	S	1584	CACAAAGCCATGTGATGAGACTGTGCGTTGTTTTTCCCATAGGATAAAAC	14	-	72096525-72096574	14qD3	Mus musculus integral membrane protein 2B (Itm2b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]	E25BMM; D14Sel6; AI256040	E25BMM; D14Sel6; AI256040
Mus musculus	RefSeq	ILMN_216376	ILMN_216376	ITM2B	NM_008410.1	NM_008410.1		16432	6680501	NM_008410.1	Itm2b	NP_032436.1	ILMN_2689803	002480487	S	1515	TGGAATTTAAGAAGCAACTCATGTTACTAATTTGTATAGGCCCATATCTG	14	-	72096594-72096643	14qD3	Mus musculus integral membrane protein 2B (Itm2b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]	E25BMM; D14Sel6; AI256040	E25BMM; D14Sel6; AI256040
Mus musculus	RefSeq	ILMN_239113	ILMN_239113	TMED10	NM_026775.4	NM_026775.4		68581	115311554	NM_026775.4	Tmed10	NP_081051.1	ILMN_3002943	005860603	S	3015	TCCTGTTTTCTGACGTGTGCCTTCCCCCCTAAGGAGCAGTGACAGCCGCT	12	-	86682025-86682074	12qD2	Mus musculus transmembrane emp24-like trafficking protein 10 (yeast) (Tmed10), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence ISS]; The lipid bilayer surrounding a zymogen granule [goid 42589] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; A process of exocytosis in which soluble proteins and other substances are initially stored in secretory vesicles for later release. It is found mainly in cells that are specialized for secreting products such as hormones, neurotransmitters, or digestive enzymes rapidly on demand [goid 45055] [pmid 17101722] [evidence IEP]; The process by which vesicles are directed to specific destination membranes during transport to, from or within the Golgi apparatus; mediated by the addition of specific coat proteins, including COPI and COPII proteins and clathrin, to the membrane during vesicle formation [goid 48199] [pmid 17101722] [evidence IEP]		MGC102351; p23; Tmp21; p24delta1; 1110014C03Rik	MGC102351; p23; Tmp21; p24delta1; 1110014C03Rik
Mus musculus	RefSeq	ILMN_190794	ILMN_239113	TMED10	NM_026775.4	NM_026775.4		68581	115311554	NM_026775.4	Tmed10	NP_081051.1	ILMN_2473337	000010671	S	3412	CCCCCATCAGAGCCATCTTCTGTTTGTTAATGGGAAGAGGCATGTGGGAT	12	-	86681628-86681677	12qD2	Mus musculus transmembrane emp24-like trafficking protein 10 (yeast) (Tmed10), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence ISS]; The lipid bilayer surrounding a zymogen granule [goid 42589] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; A process of exocytosis in which soluble proteins and other substances are initially stored in secretory vesicles for later release. It is found mainly in cells that are specialized for secreting products such as hormones, neurotransmitters, or digestive enzymes rapidly on demand [goid 45055] [pmid 17101722] [evidence IEP]; The process by which vesicles are directed to specific destination membranes during transport to, from or within the Golgi apparatus; mediated by the addition of specific coat proteins, including COPI and COPII proteins and clathrin, to the membrane during vesicle formation [goid 48199] [pmid 17101722] [evidence IEP]		MGC102351; p23; Tmp21; p24delta1; 1110014C03Rik	MGC102351; p23; Tmp21; p24delta1; 1110014C03Rik
Mus musculus	RefSeq	ILMN_193401	ILMN_193401	TMEM184C	NM_145599.3	NM_145599.3		234463	142364349	NM_145599.3	Tmem184c	NP_663574.2	ILMN_1248892	001980750	S	1893	GACCATTACTCCACCGAGACCAATTTCTATAACCAGCATATATGAAGAGG	8	-	80120584-80120633	8qC1	Mus musculus transmembrane protein 184C (Tmem184c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AL033298; MGC8158; 8430433H16Rik; BC004056; AI645453	AL033298; MGC8158; 8430433H16Rik; BC004056; AI645453
Mus musculus	RefSeq	ILMN_215098	ILMN_215098	NRTN	NM_008738.2	NM_008738.2		18188	118130662	NM_008738.2	Nrtn	NP_032764.1	ILMN_2655498	001990471	S	466	CTACGACGCCCTCCACGCACCCTGGACGCCCGCATCGCCCGCCTGGCCCA	17	-	56891733-56891782	17qD	Mus musculus neurturin (Nrtn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence ISO]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence ISO]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]	NTN	NTN
Mus musculus	RefSeq	ILMN_194694	ILMN_194694	ZFYVE21	NM_026752.2	NM_026752.2		68520	31980849	NM_026752.2	Zfyve21	NP_081028.2	ILMN_2508745	004900484	S	1064	TTCCTAGACTCTGGTCACTCTGTCACTAACCGGGGCGATGAACAGTCCTG	12	+	113066423-113066472	12qF1	Mus musculus zinc finger, FYVE domain containing 21 (Zfyve21), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C85416; AW558780; 1110013H04Rik	C85416; AW558780; 1110013H04Rik
Mus musculus	RefSeq	ILMN_193482	ILMN_310214	LOC100048480	XM_001480451.1	XM_001480451.1		100048480	149241409	XM_001480451.1	LOC100048480	XP_001480501.1	ILMN_2497616	004220296	S	45	CAAGCAAGTGGCTGGATGGTTTTCGAAAGTGGTATTATAATGCTGCAGGA					PREDICTED: Mus musculus similar to ubiquinol-cytochrome c reductase binding protein (LOC100048480), mRNA.					
Mus musculus	RefSeq	ILMN_219473	ILMN_219473	PCDHGB7	NM_033579.1	NM_033579.1		93704	18087742	NM_033579.1	Pcdhgb7	NP_291057.1	ILMN_1228723	006330427	S	2317	CCAGCCGCACAAGATATTCTCAACAAAGATAGCTCCTCGGCACTGTTGGC	18	+	37913749-37913798	18qB3	Mus musculus protocadherin gamma subfamily B, 7 (Pcdhgb7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199876	ILMN_199876	LOC383092	XM_356868.1	XM_356868.1			38078578	XM_356868.1	LOC383092		ILMN_1256303	005910170	S	371	ACCAGGTGGATGCTCAGAGAGAAAGGCCACTGCCCCAGGTTACACAGCCT										
Mus musculus	RefSeq	ILMN_257854	ILMN_257854	HECW2	NM_001001883.2	NM_001001883.2		329152	118131081	NM_001001883.2	Hecw2	NP_001001883.1	ILMN_3098718	000270746	A	682	GGGCAGGAGAGAAGGTCCACTATCATCAGCAACACCACCAATCCGATCTG	1	-	53989972-53990021	1qC1.1	Mus musculus HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 (Hecw2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Nedl2; Gm971; A730039N16Rik; mKIAA1301; D030049F17Rik	Nedl2; Gm971; A730039N16Rik; mKIAA1301; D030049F17Rik
Mus musculus	RefSeq	ILMN_196905	ILMN_257854	HECW2	NM_001001883.2	NM_001001883.2		329152	118131081	NM_001001883.2	Hecw2	NP_001001883.1	ILMN_2526208	006770408	S	4520	CAGGCACATCCAGCATTCCCTATGAAGGATTCGCTTCTCTCCGAGGGAGT	1	-	53883775-53883824	1qC1.1	Mus musculus HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 (Hecw2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Nedl2; Gm971; A730039N16Rik; mKIAA1301; D030049F17Rik	Nedl2; Gm971; A730039N16Rik; mKIAA1301; D030049F17Rik
Mus musculus	RefSeq	ILMN_257854	ILMN_257854	HECW2	NM_001001883.2	NM_001001883.2		329152	118131081	NM_001001883.2	Hecw2	NP_001001883.1	ILMN_3025989	000150398	I	4622	CCAGAGCCCACACTTGTTTTAACCGCCTGGATCTGCCTCCATACCCTTCC	1	-	53870131-53870177:53883720-53883722	1qC1.1	Mus musculus HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 (Hecw2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Nedl2; Gm971; A730039N16Rik; mKIAA1301; D030049F17Rik	Nedl2; Gm971; A730039N16Rik; mKIAA1301; D030049F17Rik
Mus musculus	MEEBO	ILMN_185168	ILMN_185168	ZCWCC3	scl0338467.4_16				51830162	XM_128334	Zcwcc3		ILMN_2587975	001030347	I	1611	CGTGGTGACTGCCATTGCCAGTGATATGGCTGTGCCAGAGGGCATTGCTG										
Mus musculus	RefSeq	ILMN_223322	ILMN_223322	OLFR1232	NM_146323.1	NM_146323.1		258320	22129650	NM_146323.1	Olfr1232	NP_666435.1	ILMN_2762480	000520386	S	605	GTGGGTTGATCTGTATTATAGTCTTTGTTTTGTTGCTTGTCTCCTATGGC	2	-	89165681-89165730	2qE1	Mus musculus olfactory receptor 1232 (Olfr1232), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR233-18	MOR233-18
Mus musculus	RefSeq	ILMN_237306	ILMN_237306	DUX	NM_001081954.1	NM_001081954.1		672911	126432555	NM_001081954.1	Dux	NP_001075423.1	ILMN_3007253	004780465	S	1962	GGACACAACACCTGATCTGCCTCTCACTTCAGAAGAATATCAGACTCTTC					Mus musculus double homeobox (Dux), mRNA.				Dux4	Dux4
Mus musculus	RefSeq	ILMN_198075	ILMN_237306	DUX	NM_001081954.1	NM_001081954.1		672911	126432555	NM_001081954.1	Dux	NP_001075423.1	ILMN_1236078	004260475	S	1862	CGGACCCCCTGGAGCTCTTCCTTGATCAACTGCTGACCGAAGTCCAACTT					Mus musculus double homeobox (Dux), mRNA.				Dux4	Dux4
Mus musculus	RefSeq	ILMN_248390	ILMN_248390	MARE	NM_181569.1	NM_181569.1		17168	38194221	NM_181569.1	Mare	NP_853547.1	ILMN_2879349	001570382	S	1883	GGTCTGGTCAGAAGCAGCTATGGGGCAGCCATGGTTGGGCTTTGTGATTC	11	-	32132802-32132851	11qA4	Mus musculus alpha globin regulatory element containing gene (Mare), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	m(alpha)RE; HS-40; HS-26; Aag; CGTHBA	m(alpha)RE; HS-40; HS-26; Aag; CGTHBA
Mus musculus	RefSeq	ILMN_221408	ILMN_221408	POP1	NM_152894.1	NM_152894.1		67724	23097255	NM_152894.1	Pop1	NP_690854.1	ILMN_2735149	006370762	S	1709	TGCACCGGCAGCTGGTCTTGTGCTCATTGGAAGCCTCTGTCTGACCATAC	15	+	34442873-34442922	15qB3.1	Mus musculus processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) (Pop1), transcript variant 1, mRNA.			Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]	4932434G09Rik; MGC36536	4932434G09Rik; MGC36536
Mus musculus	Riken	ILMN_201880	ILMN_201880	CD1D2	ri|4921528E07|PX00015E05|AK014975|1729					AK014975	Cd1d2		ILMN_1235367	007050465	S	412	ACACCAGCCCACTCTACAGGGATGAGACTTTGAAGAGAAAGGGGGTAAAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-4 [goid 45404] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer T cell activation [goid 51135] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]			
Mus musculus	RefSeq	ILMN_259311	ILMN_259311	ZFP366	NM_001004149.1	NM_001004149.1		238803	51921300	NM_001004149.1	Zfp366	NP_001004149.1	ILMN_2989364	005310204	S	2426	CGTGGGTAACATCGGCATCTCAGGTCCTTTCTTGGGCACTCGGCAATTTC	13	+	100016655-100016704	13qD1	Mus musculus zinc finger protein 366 (Zfp366), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			DC-SCRIPT; MGC99415; Znf366	DC-SCRIPT; MGC99415; Znf366
Mus musculus	RefSeq	ILMN_197314	ILMN_259311	ZFP366	NM_001004149.1	NM_001004149.1		238803	51921300	NM_001004149.1	Zfp366	NP_001004149.1	ILMN_1228615	006270632	S	2085	AGGAGCGAGGACCACGAGGGCAGTGACATAGACTGCGAGGGCAAAGACAT	13	+	100016314-100016363	13qD1	Mus musculus zinc finger protein 366 (Zfp366), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			DC-SCRIPT; MGC99415; Znf366	DC-SCRIPT; MGC99415; Znf366
Mus musculus	RefSeq	ILMN_186954	ILMN_256787	ABRA	NM_175456.4	NM_175456.4		223513	146198724	NM_175456.4	Abra	NP_780665.1	ILMN_2732401	007550066	S	1622	ACTTCAAACCGTTATGTCAGCTCATCCTCTGTAGTGCTGGGACAGCAGGC				15qB3.1	Mus musculus actin-binding Rho activating protein (Abra), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]	The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of Rho protein signal transduction [goid 35025] [evidence IDA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51091] [evidence IDA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]	C130068O12Rik; STARS	C130068O12Rik; STARS
Mus musculus	RefSeq	ILMN_188080	ILMN_242407	FBLN1	NM_010180.1	NM_010180.1		14114	6753821	NM_010180.1	Fbln1	NP_034310.1	ILMN_2728985	001190041	S	2001	GTACCCCGCCAACCAGGCCGACATCATCTTCGACATCACAGAAGGGAACC	15	+	85095711-85095760	15qE2	Mus musculus fibulin 1 (Fbln1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence IDA]		
Mus musculus	RefSeq	ILMN_188080	ILMN_242407	FBLN1	NM_010180.1	NM_010180.1		14114	6753821	NM_010180.1	Fbln1	NP_034310.1	ILMN_2602770	006900315	S	2508	GGCATTGCTAAGGACCAATTGAAGGAGTTTTCAAAGCAGACTCCACCCGA	15	+	85115876-85115925	15qE2	Mus musculus fibulin 1 (Fbln1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence IDA]		
Mus musculus	RefSeq	ILMN_242407	ILMN_242407	FBLN1	NM_010180.1	NM_010180.1		14114	6753821	NM_010180.1	Fbln1	NP_034310.1	ILMN_2870672	002690070	S	2625	ACCAACTGGGCTCTTTGTGTTTCAAGTTGATGGCTGCTGTAGAGTGGCGC	15	+	85115993-85116042	15qE2	Mus musculus fibulin 1 (Fbln1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 16504] [evidence IDA]		
Mus musculus	RefSeq	ILMN_191175	ILMN_191175	UBE2A	NM_019668.3	NM_019668.3		22209	118130597	NM_019668.3	Ube2a	NP_062642.1	ILMN_2476804	006590309	S	1122	GGCACTTACTGGTAGCAAGGAGACTGCTAAAGGACCCAGCTAACAAACTG	X	+	34423678-34423727	XqA3.3	Mus musculus ubiquitin-conjugating enzyme E2A, RAD6 homolog (S. cerevisiae) (Ube2a), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HR6A; Mhr6a; HHR6A	HR6A; Mhr6a; HHR6A
Mus musculus	MEEBO	ILMN_189412	ILMN_189412	2610029K11RIK	scl50811.1.1_128						2610029K11Rik		ILMN_1241811	006130132	S	3	GAGGCCGTGGGTAAAAATTTCTCAGACCTGGAACGGGCTCAAGCCAGGGC										
Mus musculus	RefSeq	ILMN_196703	ILMN_196703	LOC270366	XM_195404.2	XM_195404.2			38096688	XM_195404.2	LOC270366		ILMN_1214125	003390537	S	493	CGCCTTGCAGACCATGGCGAACCCATTGGCCAGAATACGAAAAAGGAACG										
Mus musculus	RefSeq	ILMN_185699	ILMN_261133	SNORA70	NR_002899.1	NR_002899.1		104368	86604685	NR_002899.1	Snora70		ILMN_2429250	006510044	S	20	CCTTTTCCCATGGGGACTTTGGTGTGCAATGGTTGCAAACAGCAGCCTCC	X	+	71516373-71516422	XqA7.3	Mus musculus small nucleolar RNA, H/ACA box 70 (Snora70), non-coding RNA.	A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		MBI-5; Rnu70	MBI-5; Rnu70
Mus musculus	Riken	ILMN_204258	ILMN_204258	B130008E07RIK	ri|B130008E07|PX00156L19|AK044856|2072					AK044856	B130008E07Rik		ILMN_2563602	006980463	S	1496	GGTGTGCCAGTGGATGTATGAAAACTCACCCCTAGTCCCAGCCTCAGTCT										
Mus musculus	RefSeq	ILMN_211353	ILMN_211353	ABLIM1	NM_178688.2	NM_178688.2		226251	38016177	NM_178688.2	Ablim1	NP_848803.2	ILMN_1241444	004200441	S	1812	GCCCGACAGCCGCCCTCTAACTCCAACTTACGCTCAGGCCCCTAAACATT	19	-	57125631-57125680	19qD2	Mus musculus actin-binding LIM protein 1 (Ablim1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	mKIAA0059; Limab1; abLIM-M; AW060987; abLIM-L; 2210411C18Rik; 2610209L21Rik; abLIM-S; 9330196J19Rik; 4833406P10Rik; AW215784; AV079770	mKIAA0059; Limab1; abLIM-M; AW060987; abLIM-L; 2210411C18Rik; 2610209L21Rik; abLIM-S; 9330196J19Rik; 4833406P10Rik; AW215784; AV079770
Mus musculus	RefSeq	ILMN_211353	ILMN_211353	ABLIM1	NM_178688.2	NM_178688.2		226251	38016177	NM_178688.2	Ablim1	NP_848803.2	ILMN_1256608	002230014	S	1263	CTCTGAAAGTATCTATTCTAGACCAGGCTCCAGCATCCCTGGTTCACCAG	19	-	57143363-57143412	19qD2	Mus musculus actin-binding LIM protein 1 (Ablim1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	mKIAA0059; Limab1; abLIM-M; AW060987; abLIM-L; 2210411C18Rik; 2610209L21Rik; abLIM-S; 9330196J19Rik; 4833406P10Rik; AW215784; AV079770	mKIAA0059; Limab1; abLIM-M; AW060987; abLIM-L; 2210411C18Rik; 2610209L21Rik; abLIM-S; 9330196J19Rik; 4833406P10Rik; AW215784; AV079770
Mus musculus	RefSeq	ILMN_211353	ILMN_211353	ABLIM1	NM_178688.2	NM_178688.2		226251	38016177	NM_178688.2	Ablim1	NP_848803.2	ILMN_2648841	002370592	S	1814	CGACAGCCGCCCTCTAACTCCAACTTACGCTCAGGCCCCTAAACATTTCC	19	-	57125629-57125678	19qD2	Mus musculus actin-binding LIM protein 1 (Ablim1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	mKIAA0059; Limab1; abLIM-M; AW060987; abLIM-L; 2210411C18Rik; 2610209L21Rik; abLIM-S; 9330196J19Rik; 4833406P10Rik; AW215784; AV079770	mKIAA0059; Limab1; abLIM-M; AW060987; abLIM-L; 2210411C18Rik; 2610209L21Rik; abLIM-S; 9330196J19Rik; 4833406P10Rik; AW215784; AV079770
Mus musculus	RefSeq	ILMN_211353	ILMN_211353	ABLIM1	NM_178688.2	NM_178688.2		226251	38016177	NM_178688.2	Ablim1	NP_848803.2	ILMN_2958692	000830114	S	2620	TGGAGACGCAACGACATGAAGAAAAAAGCTAAACTCTTCTAAGTCCCTCG	19	-	57111705-57111713:57111714-57111754	19qD2	Mus musculus actin-binding LIM protein 1 (Ablim1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	mKIAA0059; Limab1; abLIM-M; AW060987; abLIM-L; 2210411C18Rik; 2610209L21Rik; abLIM-S; 9330196J19Rik; 4833406P10Rik; AW215784; AV079770	mKIAA0059; Limab1; abLIM-M; AW060987; abLIM-L; 2210411C18Rik; 2610209L21Rik; abLIM-S; 9330196J19Rik; 4833406P10Rik; AW215784; AV079770
Mus musculus	RefSeq	ILMN_199097	ILMN_225252	LOC672731	XR_004464.1	XR_004464.1		672731	94389228	XR_004464.1	LOC672731		ILMN_1216936	002810707	S	516	GGGACTAGCAAGACTGCAACCCCTCAACCGGAAGTACATGAGAAGCTCCA					PREDICTED: Mus musculus similar to triosephosphate isomerase 1 (LOC672731), mRNA.					
Mus musculus	RefSeq	ILMN_220859	ILMN_220859	LTB4R1	NM_008519.1	NM_008519.1		16995	6678727	NM_008519.1	Ltb4r1	NP_032545.1	ILMN_1220609	004230402	S	1165	GACACAACTCATAACTCTGGCCTGACCCACTTCTGTACCTGGAGGAGAAC	14	+	56387156-56387205	14qC3	Mus musculus leukotriene B4 receptor 1 (Ltb4r1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a leukotriene to initiate a change in cell activity. Leukotrienes are pharmacologically active substances with a set of three conjugated double bonds; some contain a peptide moiety based on cysteine [goid 4974] [evidence IEA]; Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate [goid 1632] [evidence IDA]	Ltb4r; BLTR; BLT1; mBLTR	Ltb4r; BLTR; BLT1; mBLTR
Mus musculus	RefSeq	ILMN_184911	ILMN_219856	EBF3	NM_010096.2	NM_010096.2		13593	83816925	NM_010096.2	Ebf3	NP_034226.1	ILMN_2422615	006770497	S	4618	GCAAGTGTCCTCATGCCCGCACCCGGTTTGTGTTGTAGATCAACTAGCCA	7	-	144385574-144385623	7qF4	Mus musculus early B-cell factor 3 (Ebf3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA4201; mKIAA4201; 3110018A08Rik; O/E-2	KIAA4201; mKIAA4201; 3110018A08Rik; O/E-2
Mus musculus	RefSeq	ILMN_219856	ILMN_219856	EBF3	NM_010096.2	NM_010096.2		13593	83816925	NM_010096.2	Ebf3	NP_034226.1	ILMN_2714455	005090273	S	3225	GACACTTCCTTTCCCATGAACACTTGCAGTTGCTAAGGGACTTTATTTTG	7	-	144386967-144387016	7qF4	Mus musculus early B-cell factor 3 (Ebf3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA4201; mKIAA4201; 3110018A08Rik; O/E-2	KIAA4201; mKIAA4201; 3110018A08Rik; O/E-2
Mus musculus	Riken	ILMN_204818	ILMN_204818	MEIS1	ri|C530044H18|PX00083E17|AK049720|2785					AK049720	Meis1		ILMN_1218217	006450048	S	2709	TCCTACAGCCCAGAGCTGCTACAGGGGTCACAGCCTAGCGTTTTGTTTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IC ]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	MEEBO	ILMN_196035	ILMN_196035	VMD2L1	scl34547.11.1_54				21703775	NM_145388	Vmd2l1		ILMN_2521014	000580246	S	6	ATGCTGGCGACCACCAGGGTCTGCACAAGCTAGCTAGGCCTTCAGAAAGC										
Mus musculus	RefSeq	ILMN_185834	ILMN_231503	LOC624071	NM_001081305.1	NM_001081305.1		624071	124486816	NM_001081305.1	LOC624071	NP_001074774.1	ILMN_2430402	000670040	S	201	ATATGTCGAGACAAACTACAATCAACAACCCTTAGGAGGGAAGAACAAGA	13	+	19335018-19335067	13qA2	Mus musculus similar to T-cell receptor gamma chain C region C7.5 (LOC624071), mRNA.					
Mus musculus	RefSeq	ILMN_218423	ILMN_218423	TDH	NM_021480.4	NM_021480.4		58865	40254374	NM_021480.4	Tdh	NP_067455.4	ILMN_1244724	001170228	S	1806	GCCCAGAGACCAAAGATTACATGTTAGGGTTTTCAAAGCTGTTCTTCATG	14	-	64111209-64111258	14qD1	Mus musculus L-threonine dehydrogenase (Tdh), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: L-threonine + NAD+ = L-2-amino-3-oxobutanoate + NADH + H+ [goid 8743] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184810	ILMN_184810	TPBPB	scl43863.4.1_3				13385925	NM_026429	Tpbpb		ILMN_1250714	001030608	S	20	TAATGACTAACATTTTCCACCCAATGTGGAAGAGGAGAAAACACAGCCAG										
Mus musculus	RefSeq	ILMN_211158	ILMN_211158	OAS1B	NM_011853.1	NM_011853.1		23961	21728363	NM_011853.1	Oas1b	NP_035983.1	ILMN_2823462	005550010	S	1309	TTTTCCTGTGAGCCCAGTGGGACCTGTCCAGGATGCTCCAGAGTCAGACG	5	+	121084249-121084298	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1B (Oas1b), mRNA.		Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Wnv; Oias-2; L1; Mmu-L1; Flv; Oias2	Wnv; Oias-2; L1; Mmu-L1; Flv; Oias2
Mus musculus	MEEBO	ILMN_189142	ILMN_189142	4921507L20RIK	scl20593.3.1_1						4921507L20Rik		ILMN_2458720	006510484	S	3	AAAAGATGGGTCAAGAGATGGGTTGCTCCTCCTCAGAGCTGCTGGGTGCA										
Mus musculus	RefSeq	ILMN_215774	ILMN_215774	IL11	NM_008350.2	NM_008350.2		16156	144922698	NM_008350.2	Il11	NP_032376.1	ILMN_1243862	007650477	S	901	TGGGTTCTGGGGTCTCTATGAAATCTGTTCACAGTGTCTTCCTCACTTCC	7	-	4724863-4724912	7qA1	Mus musculus interleukin 11 (Il11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Interacting selectively with the interleukin-11 receptor [goid 5142] [evidence IPI]	IL-11	IL-11
Mus musculus	RefSeq	ILMN_219640	ILMN_219640	SLPI	NM_011414.2	NM_011414.2		20568	141801540	NM_011414.2	Slpi	NP_035544.1	ILMN_1256817	002810487	S	1006	TGGCTCAGCATTCACCGATCTTTAGGGAAATGCTGTTGGAGAGCAAATAA	2	-	164179827-164179876	2qH3	Mus musculus secretory leukocyte peptidase inhibitor (Slpi), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222609	ILMN_222609	APOBEC1	NM_031159.3	NM_031159.3		11810	118130296	NM_031159.3	Apobec1	NP_112436.1	ILMN_1257631	001110088	S	1849	CTGCCTGGCCTCCAAAGGCTATAATGGCATACAGCAGTCCCAGGGCATTA	6	-	122528176-122528225	6qF1	Mus musculus apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 (Apobec1), transcript variant 1, mRNA.		Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically [goid 16556] [evidence IMP]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [evidence IGI]; The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42158] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IMP]; Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules [goid 48255] [evidence IDA]; The conversion of a cytosine residue to uridine in an RNA molecule by deamination [goid 16554] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2 [goid 16814] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IDA]; Catalysis of the reaction: cytidine + H2O = uridine + NH3 [goid 4126] [evidence ISO]	Cdar1	Cdar1
Mus musculus	RefSeq	ILMN_216212	ILMN_227745	1700109H08RIK	NM_029843.2	NM_029843.2		77036	141803495	NM_029843.2	1700109H08Rik	NP_084119.1	ILMN_1225045	003310291	S	632	GCCCTGGTGTTCAAAAACAACCCCCCTGCCAGTCTCTGAACACAGATTGC	5	+	3584258-3584296:3584297-3584307	5qA1	Mus musculus RIKEN cDNA 1700109H08 gene (1700109H08Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC118394	MGC118394
Mus musculus	RefSeq	ILMN_196356	ILMN_196356	EG330513	NM_177890.3	NM_177890.3		330513	116089289	NM_177890.3	EG330513	NP_808558.2	ILMN_2968418	005670341	S	2357	CTAGTGCTGTGAACCAGTTGGCCACCTCGAGGCCTGTACCCTACAGAGCT	7	-	46663304-46663353	7qB3	Mus musculus predicted gene, EG330513 (EG330513), mRNA.				4921507A12	4921507A12
Mus musculus	Riken	ILMN_201908	ILMN_201908	4933424B12RIK	ri|4933424B12|PX00020P05|AK016883|1260					AK016883	4933424B12Rik		ILMN_1222546	003400228	S	722	CCAGAAAGGAAGGAACCAGAAAGGAGCTGCACTCATTGCACTATGGACTC										
Mus musculus	RefSeq	ILMN_196887	ILMN_249113	EG241041	NR_002858.1	NR_002858.1		241041	84872149	NR_002858.1	EG241041		ILMN_1254228	004490224	S	623	GCAAAGCCAGTGTTCTCTCGGGTTTCCCTCTGCTACAGGACTTCAAGGTG	1	-	21275802-21275814:21278223-21278259	1qA4	Mus musculus predicted gene, EG241041 (EG241041), non-coding RNA.					
Mus musculus	RefSeq	ILMN_249113	ILMN_249113	EG241041	NR_002858.1	NR_002858.1		241041	84872149	NR_002858.1	EG241041		ILMN_2911009	004070402	S	1068	GACAGGCTACCAAGACAGAATTCAGAAAATCCAAGGAGCCCTCGGCCTTC	1	-	21275357-21275406	1qA4	Mus musculus predicted gene, EG241041 (EG241041), non-coding RNA.					
Mus musculus	RefSeq	ILMN_223468	ILMN_223468	CAPSL	NM_029341.1	NM_029341.1		75568	21312981	NM_029341.1	Capsl	NP_083617.2	ILMN_2764466	000870164	S	713	CATTGACACAGATGTGTACTTCATCATCATGATGACGACGGCTTGGAAGC	15	+	9395557-9395606	15qA1	Mus musculus calcyphosine-like (Capsl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	1700028N11Rik; AW125205; MGC74120	1700028N11Rik; AW125205; MGC74120
Mus musculus	RefSeq	ILMN_215884	ILMN_309883	LOC100045005	XR_031422.1	XR_031422.1		100045005	149261557	XR_031422.1	LOC100045005		ILMN_1238838	002370494	S	1731	GTCCTACCTTAACGGACCCTTTCTCTCCCGTGTCTGTCTTTGTCAGTCTG					PREDICTED: Mus musculus similar to Deltex3 (LOC100045005), misc RNA.					
Mus musculus	RefSeq	ILMN_213162	ILMN_213162	IGFBP7	NM_008048.2	NM_008048.2		29817	62990156	NM_008048.2	Igfbp7	NP_032074.2	ILMN_2764588	005360685	S	946	CCTGACACACTTCTCTTAACCTAACCCACTAACACTTTATTACAGCCAGC	5	-	77778385-77778434	5qC3.3	Mus musculus insulin-like growth factor binding protein 7 (Igfbp7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Fstl2; mac25	Fstl2; mac25
Mus musculus	RefSeq	ILMN_187833	ILMN_213162	IGFBP7	NM_008048.2	NM_008048.2		29817	62990156	NM_008048.2	Igfbp7	NP_032074.2	ILMN_2447512	007050204	S	1074	ACATGTGCTTTTTTCTGTAAATAATAAATTTTTGTAGATAGTCTTGATGT				5qC3.3	Mus musculus insulin-like growth factor binding protein 7 (Igfbp7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Fstl2; mac25	Fstl2; mac25
Mus musculus	RefSeq	ILMN_220898	ILMN_213162	IGFBP7	NM_008048.2	NM_008048.2		29817	62990156	NM_008048.2	Igfbp7	NP_032074.2	ILMN_1245755	001510402	S	1084	GTTTAAAGCTACATGTGCTTTTTTCTGTAAATAATAAATTTTTGTAGATA				5qC3.3	Mus musculus insulin-like growth factor binding protein 7 (Igfbp7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Fstl2; mac25	Fstl2; mac25
Mus musculus	RefSeq	ILMN_213162	ILMN_213162	IGFBP7	NM_008048.2	NM_008048.2		29817	62990156	NM_008048.2	Igfbp7	NP_032074.2	ILMN_2634286	007040017	S	1027	ATCAAGACTATCTACAAAAATTTATTATTTACAGAAAAAAGCACATGTAG	5	-	77778304-77778353	5qC3.3	Mus musculus insulin-like growth factor binding protein 7 (Igfbp7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Fstl2; mac25	Fstl2; mac25
Mus musculus	RefSeq	ILMN_213162	ILMN_213162	IGFBP7	NM_008048.2	NM_008048.2		29817	62990156	NM_008048.2	Igfbp7	NP_032074.2	ILMN_2762029	006420333	S	1039	TACAAAAATTTATTATTTACAGAAAAAAGCACATGTAGCTTTAAACAAAA	5	-	77778292-77778341	5qC3.3	Mus musculus insulin-like growth factor binding protein 7 (Igfbp7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Fstl2; mac25	Fstl2; mac25
Mus musculus	RefSeq	ILMN_210802	ILMN_210802	SULT3A1	NM_020565.1	NM_020565.1		57430	10181193	NM_020565.1	Sult3a1	NP_065590.1	ILMN_1226659	004060246	S	1079	GATTACCTTGTGCCTAGATTGTTTTCCATGACATAAATTTCAAATGGAGC	10	+	33599263-33599312	10qB1	Mus musculus sulfotransferase family 3A, member 1 (Sult3a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + an amine = adenosine 3',5'-bisphosphate + a sulfamate [goid 47685] [evidence IEA]	MGC159296; Sultx2; MGC159298; Sult-x2	MGC159296; Sultx2; MGC159298; Sult-x2
Mus musculus	RefSeq	ILMN_216822	ILMN_313863	LOC100047615	XR_033484.1	XR_033484.1		100047615	149271323	XR_033484.1	LOC100047615		ILMN_2675747	000620433	S	186	TGTCACGCATCTGATGAAGCGGATTCAGAGAGGGCCTGTGAGAGGCATCT					PREDICTED: Mus musculus similar to 40S ribosomal protein S17 (LOC100047615), misc RNA.					
Mus musculus	RefSeq	ILMN_193758	ILMN_317679	LOC100048332	XM_001480027.1	XM_001480027.1		100048332	149267976	XM_001480027.1	LOC100048332	XP_001480077.1	ILMN_2717496	003460736	S	2231	GGAGGATCATCGCAGATACAGCTGTGGTGAAGACAAGGCCTACCCAAAGC					PREDICTED: Mus musculus similar to a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) (LOC100048332), mRNA.					
Mus musculus	RefSeq	ILMN_201418	ILMN_201418	LOC385130	XM_358075.1	XM_358075.1			38093592	XM_358075.1	LOC385130		ILMN_1236567	000020577	S	910	ACTCCGCACGTGGTCACTGTGGACTCAGATCTTTGCAGAGTGTCTGGTAC										
Mus musculus	RefSeq	ILMN_197938	ILMN_197938	LOC328660	XM_283332.1	XM_283332.1			28493843	XM_283332.1	LOC328660		ILMN_2529896	002570598	S	465	TGGCCCACACCCAACAGACATGTTGATCACAGTGAAGGGAGAGAGGATGC										
Mus musculus	RefSeq	ILMN_200644	ILMN_200644	LOC383412	XM_357039.1	XM_357039.1			38084627	XM_357039.1	LOC383412		ILMN_1239659	004860647	S	320	GGTCTGTCTTTGTGGAGAAGATGATAAAGGAGAGCCAGTACACTCAGGAC										
Mus musculus	Riken	ILMN_206326	ILMN_206326	D330008G18RIK	ri|D330008G18|PX00191I20|AK084500|2013					AK084500	D330008G18Rik		ILMN_2579277	000290414	S	1801	GATGGCAAGCCCGTGGTTATGGGACCCGCTTCCGGCAGGTGTGGGGCTAC										
Mus musculus	Riken	ILMN_202974	ILMN_202974	A430043M19RIK	ri|A430043M19|PX00135H10|AK040015|541					AK040015	A430043M19Rik		ILMN_2553758	007210619	S	6	AGAGGCCAGCAAATTCCAGACATGCCAAGGATACAGAGAGAAGCCCCGTC										
Mus musculus	Riken	ILMN_203494	ILMN_203494	B830017H08RIK	ri|B830017H08|PX00073E05|AK080987|1123					AK080987	B830017H08Rik		ILMN_1222394	006860730	S	850	GGACGACAGTTGTGCCCTTACTTAGCCTCCCAACAGCAGCCCAACACCAG										
Mus musculus	RefSeq	ILMN_198119	ILMN_228346	LOC637117	XM_980598.1	XM_980598.1		637117	94376000	XM_980598.1	LOC637117	XP_985692.1	ILMN_1234331	003400543	S	4204	ACCATTGCTCCAACCATTATCCCTGGACACCCTACTTTCCTGGGTCATCC					PREDICTED: Mus musculus hypothetical LOC637117 (LOC637117), mRNA.					
Mus musculus	RefSeq	ILMN_197533	ILMN_197533	LOC277170	XM_204855.2	XM_204855.2			38076471	XM_204855.2	LOC277170		ILMN_1236449	001400719	S	1117	GCAGTTCAGGTTGTGCCACTCTTGGTCACTGCAAGAATAGCCGTAGGTGC										
Mus musculus	RefSeq	ILMN_189106	ILMN_218632	5730442P18RIK	NM_183288.2	NM_183288.2		70559	118130869	NM_183288.2	5730442P18Rik	NP_899111.2	ILMN_1256930	004230594	S	893	GAGGGCAGCGCAAGTCCGGAATGGCCTCGTAGACATTCTCCGAGTCGCTA	11	-	103221534-103221583	11qE1	Mus musculus RIKEN cDNA 5730442P18 gene (5730442P18Rik), mRNA.				RP23-341C5.7	RP23-341C5.7
Mus musculus	RefSeq	ILMN_218632	ILMN_218632	5730442P18RIK	NM_183288.2	NM_183288.2		70559	118130869	NM_183288.2	5730442P18Rik	NP_899111.2	ILMN_2844874	004230553	S	1125	GGATGCATGCGCCGAATAACGTTCCTAAAACGCCACCTGCTCGGTAAGGA	11	-	103221302-103221351	11qE1	Mus musculus RIKEN cDNA 5730442P18 gene (5730442P18Rik), mRNA.				RP23-341C5.7	RP23-341C5.7
Mus musculus	MEEBO	ILMN_216521	ILMN_216521	5330438D12RIK	scl38410.1_120	NM_183200.1			34147257	NM_183200.1	5330438D12Rik		ILMN_1228920	000510170	S	1885	CAGAGCACCTTAATCTGGCTGCTCGTTATTGGGAGCCCTTAATGTGTATG										
Mus musculus	RefSeq	ILMN_213052	ILMN_243440	COX18	NM_001033310.2	NM_001033310.2		231430	142348223	NM_001033310.2	Cox18	NP_001028482.1	ILMN_2633039	006400253	S	984	CTGCCTTTTGCGCCAAGTTCCTTTCAAGAAAACGATGAGAGTCCACTCCC	5	-	90644011-90644023:90644024-90644060	5qE1	Mus musculus COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) (Cox18), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process by which a protein is incorporated into a biological membrane [goid 51205] [evidence IEA]		BC038311	BC038311
Mus musculus	RefSeq	ILMN_248596	ILMN_248596	AI747448	NM_001033199.1	NM_001033199.1		99709	85701713	NM_001033199.1	AI747448	NP_001028371.1	ILMN_2844353	005550347	S	2177	GAACCCACCCAGACCCGAAATGACTGAGGCTACTCAGCCAGTCCTAGAGA	3	-	144849534-144849583	3qH2	Mus musculus expressed sequence AI747448 (AI747448), mRNA.					
Mus musculus	MEEBO	ILMN_215007	ILMN_215007	PNPLA5	scl46887.9.1_203	XM_128189.1			20903014	XM_128189.1	Pnpla5		ILMN_2654454	002340477	S	1991	CTGGGTGGCATACATACCAAAGCCCCTCTGGTCTCTTCTGGGGTCTCAGT							The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211090	ILMN_225714	WDSUB1	NM_028118.1	NM_028118.1		72137	58037280	NM_028118.1	Wdsub1	NP_082394.1	ILMN_2612407	003840349	S	1589	TGAAGATGGCCATCAACCGATGGCTGGAGACGCACGAGAAGTGAACGCGT	2	-	59690854-59690860:59690861-59690903	2qC1.1	Mus musculus WD repeat, SAM and U-box domain containing 1 (Wdsub1), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700048E19Rik; 2610014F08Rik	1700048E19Rik; 2610014F08Rik
Mus musculus	Riken	ILMN_204924	ILMN_204924	C230064E07RIK	ri|C230064E07|PX00176E09|AK048780|2173					AK048780	C230064E07Rik		ILMN_2568660	004010685	S	1940	GCCACTAAAGCATTTGCTGAGAACGAGTAAAGACGAGTGTTTGGGGCCTC										
Mus musculus	MEEBO	ILMN_224180	ILMN_224180	DEFB12	scl077674.1_233				23680954	NM_152802	Defb12		ILMN_1219678	004730519	S	848	TCTAGTAATGCCGGTGCTTCTGAAACACATTGTCCTTGCCTGCAAGAAGA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism [goid 50829] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_205575	ILMN_205575	A630085E16RIK	ri|A630085E16|PX00147E04|AK042365|2492					AK042365	A630085E16Rik		ILMN_1260366	004260356	S	2283	GAGCCAGCTGACACTGCTACCTTATCCTCAACATGGCCCCCAGACAGCAG										
Mus musculus	Riken	ILMN_203869	ILMN_203869	TRFP	ri|A630025E15|PX00144N20|AK041624|2290					AK041624	Trfp		ILMN_1237521	005670431	S	1928	GGCTGATTTTTTTGCCCGGTGGGAGGGCTGGAGGTGGTGATTCATGTCTC										
Mus musculus	RefSeq	ILMN_185817	ILMN_248449	GNRHR	NM_010323.1	NM_010323.1		14715	6754031	NM_010323.1	Gnrhr	NP_034453.1	ILMN_1227504	002650364	S	843	GATGACAGTCGCATTCGCTACCTCCTTTGTCGTCTGCTGGACTCCCTACT	5	-	86611337-86611386	5qE1	Mus musculus gonadotropin releasing hormone receptor (Gnrhr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with gonadotropin-releasing hormone to initiate a change in cell activity [goid 4968] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208930	ILMN_208930	ABCB8	NM_029020.2	NM_029020.2		74610	27753994	NM_029020.2	Abcb8	NP_083296.2	ILMN_2590908	003360181	S	2555	ACAGAGCCCTTGGAAGGCCAGTGTGCTGGAGTGTGGCCTGCACTACTGCC	5	+	23915373-23915422	5qA3	Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 8 (Abcb8), nuclear gene encoding mitochondrial protein, mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AA409895; 4833412N02Rik	AA409895; 4833412N02Rik
Mus musculus	RefSeq	ILMN_208930	ILMN_208930	ABCB8	NM_029020.2	NM_029020.2		74610	27753994	NM_029020.2	Abcb8	NP_083296.2	ILMN_2864834	001500634	S	2764	AACACTCAGTTGTTTGGGCCCTCACTCCAGGAGACTGGCCAGGCCTGGTA	5	+	23915582-23915631	5qA3	Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 8 (Abcb8), nuclear gene encoding mitochondrial protein, mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AA409895; 4833412N02Rik	AA409895; 4833412N02Rik
Mus musculus	RefSeq	ILMN_208930	ILMN_208930	ABCB8	NM_029020.2	NM_029020.2		74610	27753994	NM_029020.2	Abcb8	NP_083296.2	ILMN_2663015	004900133	S	2287	CCACCGGCTTAGTACTGTCCGTGCAGCCCACTCCATCATTGTCATGGCCA	5	+	23914570-23914619	5qA3	Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 8 (Abcb8), nuclear gene encoding mitochondrial protein, mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AA409895; 4833412N02Rik	AA409895; 4833412N02Rik
Mus musculus	MEEBO	ILMN_224109	ILMN_224109	CCT6A	scl27178.12.102_2				6753323	NM_009838	Cct6a		ILMN_2774941	004560703	S	1509	GCCGATGGTGGCTGCAGAGATGGGTGTGTGGGATAACTACTGTGTGAAGA						A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_237896	ILMN_237896	RWDD3	NM_028456.1	NM_028456.1		73170	39930448	NM_028456.1	Rwdd3	NP_082732.1	ILMN_2922728	000650626	S	775	GGACTTGGGGAGCTCTTCTCAGAGTGTGTACTGGGGCTGGTGAAATGAGG	3	-	121148208-121148210:121148211-121148257		Mus musculus RWD domain containing 3 (Rwdd3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC150017; AI662458; AI035684; X2CR1; 3110037C01Rik	MGC150017; AI662458; AI035684; X2CR1; 3110037C01Rik
Mus musculus	RefSeq	ILMN_209586	ILMN_237896	RWDD3	NM_028456.1	NM_028456.1		73170	39930448	NM_028456.1	Rwdd3	NP_082732.1	ILMN_1236100	005090315	S	53	TGGCCGCGATCTTCTGCGGGCCCAACGAGTGGGAGATGTTGAGCTGTTCA	3	-	121163615-121163664		Mus musculus RWD domain containing 3 (Rwdd3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC150017; AI662458; AI035684; X2CR1; 3110037C01Rik	MGC150017; AI662458; AI035684; X2CR1; 3110037C01Rik
Mus musculus	RefSeq	ILMN_261653	ILMN_261653	LMX1B	NM_010725.1	NM_010725.1		16917	6754561	NM_010725.1	Lmx1b	NP_034855.1	ILMN_2931640	006900050	S	938	GCCTCACGCCGCCCCAAATGCCAGGGAACGACTCCATCTTCCACGATATT	2	-	33420287-33420313:33420602-33420624	2qB	Mus musculus LIM homeobox transcription factor 1 beta (Lmx1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence NAS]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; The process by which the anatomical structure of the cerebellum is generated and organized. Morphogenesis pertains to the creation of form. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21587] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [pmid 10767331] [evidence IEP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	MGC159172; LMX1.2; LMX1.1	MGC159172; LMX1.2; LMX1.1
Mus musculus	RefSeq	ILMN_219387	ILMN_219387	HCCS	NM_008222.2	NM_008222.2		15159	31542949	NM_008222.2	Hccs	NP_032248.2	ILMN_2994173	006200408	S	1946	GGTTGTTTTGCTGGGCAGTAGTAGCACAAGCCTTTAACCCCAGCATTCCA	X	-	164655959-164656008	XqF5	Mus musculus holocytochrome c synthetase (Hccs), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]		Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: holocytochrome c = apocytochrome c + heme [goid 4408] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210734	ILMN_210734	E130309F12RIK	NM_178756.4	NM_178756.4		272031	149274656	NM_178756.4	E130309F12Rik	NP_848871.1	ILMN_1218474	006220368	S	84	TGCCTGAATGCACCTCGCCGCCTGCAGTCCGTCCGCCCAATAGGGCGCAA				4qB1	Mus musculus RIKEN cDNA E130309F12 gene (E130309F12Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	KIAA4247; PRG-3; mKIAA4247	KIAA4247; PRG-3; mKIAA4247
Mus musculus	RefSeq	ILMN_210734	ILMN_210734	E130309F12RIK	NM_178756.4	NM_178756.4		272031	149274656	NM_178756.4	E130309F12Rik	NP_848871.1	ILMN_1223516	005090553	S	3434	GTTAGTCTACCCTCTGCATTATGCCACTTTAATAAAGCCTCTGCGTACCC				4qB1	Mus musculus RIKEN cDNA E130309F12 gene (E130309F12Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	KIAA4247; PRG-3; mKIAA4247	KIAA4247; PRG-3; mKIAA4247
Mus musculus	RefSeq	ILMN_222091	ILMN_222091	NPY2R	NM_008731.3	NM_008731.3		18167	148277108	NM_008731.3	Npy2r	NP_032757.2	ILMN_3160364	000380386	S	3008	GGTGGAACGGGAAGTCCACCTTATACACTGCTGTCTGAAGTGAATCGTTG				3qE3	Mus musculus neuropeptide Y receptor Y2 (Npy2r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IDA]; Combining with gut peptide YY to initiate a change in cell activity [goid 1601] [evidence IDA]	MGC124242; MGC124241; MGC124244	MGC124242; MGC124241; MGC124244
Mus musculus	RefSeq	ILMN_187856	ILMN_254900	IBRDC3	XM_910375.2	XM_910375.2		75234	94372393	XM_910375.2	Ibrdc3	XP_915468.2	ILMN_2700689	003800181	S	2181	CCTCGCTGCTCCAGCTGAGGGCCAGACTGTCTTGAAGTCAGAAGAGTATG				4qD2.2	PREDICTED: Mus musculus IBR domain containing 3 (Ibrdc3), mRNA.					
Mus musculus	RefSeq	ILMN_223600	ILMN_228949	LOC434031	XM_992400.1	XM_992400.1		434031	94378727	XM_992400.1	LOC434031	XP_997494.1	ILMN_2766296	003890685	S	31	GGTCTCCTGTTGCTTTGTTTTCAAGGTACCAGATATGATATCCAGATGAC				6qC1	PREDICTED: Mus musculus similar to Ig kappa chain V-V region MOPC 173 (LOC434031), mRNA.					
Mus musculus	RefSeq	ILMN_260090	ILMN_260090	LOC241593	NM_001033768.1	NM_001033768.1		241593	85702070	NM_001033768.1	LOC241593	NP_001028940.1	ILMN_2824760	007610019	S	732	GCTGCCACACAAGCCCATGGACGCTCTTCCTGCTGCTGTCACACAGTACT	2	-	104515066-104515115	2qE2	Mus musculus similar to protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 (LOC241593), mRNA.					
Mus musculus	RefSeq	ILMN_188877	ILMN_254703	TBX5	NM_011537.2	NM_011537.2		21388	61098079	NM_011537.2	Tbx5	NP_035667.1	ILMN_2604948	002600386	S	445	CGCTGGGAGGCTCTAGTGGTGGGTACTTCTTTGTAGCAACAGTAGCAGCT	5	+	120285116-120285165	5qF	Mus musculus T-box 5 (Tbx5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence ISO]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISO]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_188877	ILMN_254703	TBX5	NM_011537.2	NM_011537.2		21388	61098079	NM_011537.2	Tbx5	NP_035667.1	ILMN_2664533	006370315	S	1887	TACCGTCACCACCGTGCAGCCCATGGACCGTCTTCCCTACCAGCACTTCT	5	+	120333173-120333222	5qF	Mus musculus T-box 5 (Tbx5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence ISO]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISO]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_241619	ILMN_241619	CCL7	NM_013654.2	NM_013654.2		20306	42476054	NM_013654.2	Ccl7	NP_038682.1	ILMN_2835117	004670674	S	460	ACGGTCCTAAGGGATAGGAGCTGTCTGTAGGAATGTGAAACAGTCACGCC	11	+	81860688-81860737	11qC	Mus musculus chemokine (C-C motif) ligand 7 (Ccl7), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	marc; mcp3; Scya7; MCP-3; fic	marc; mcp3; Scya7; MCP-3; fic
Mus musculus	Riken	ILMN_205903	ILMN_205903	A730096N15RIK	ri|A730096N15|PX00153N19|AK043454|1235					AK043454	A730096N15Rik		ILMN_1222741	005050482	S	869	GGACTCACTGGTCCGGCAGAGCCAGGTGCGGCCGGAATTCTTAAATTATT										
Mus musculus	RefSeq	ILMN_199493	ILMN_199493	LOC383566	XM_357128.1	XM_357128.1			38073458	XM_357128.1	LOC383566		ILMN_1243494	007330608	S	273	CGGGTTCCTCACGGCATCCTCTCTTGACAGCTATGAACTCGAGAATGGAA										
Mus musculus	Riken	ILMN_204569	ILMN_204569	B930029N08RIK	ri|B930029N08|PX00163K19|AK047158|1272					AK047158	B930029N08Rik		ILMN_1255917	004200021	S	916	GGGACCCTGAGCCAGACCCTCAAGGCCATTTCCCACACTAAGAAATTACC										
Mus musculus	RefSeq	ILMN_198872	ILMN_198872	LOC234187	XM_146287.3	XM_146287.3			38089205	XM_146287.3	LOC234187		ILMN_1239009	000150519	S	771	TCCAGCTGATTTCCCGTTGGTGACTGCCAAAGCACCACACTTGACCACTC										
Mus musculus	Riken	ILMN_204504	ILMN_204504	B230339C08RIK	ri|B230339C08|PX00160E13|AK046059|2051					AK046059	B230339C08Rik		ILMN_2565490	005090753	S	1985	AGTAGCTGAGATAATGCAGTCACTAGACACCCTTGCTTTTCAGCTTGGCA										
Mus musculus	MEEBO	ILMN_187613	ILMN_187613	SCL0001681.1_149	scl0001681.1_149	AK028877.1			26324827	AK028877.1	scl0001681.1_149		ILMN_2445629	004210259	S	14	CTACAGTAATTGGTAACCTAAGGGGCTCATGACGCCACAGGGGAGGGATG										
Mus musculus	RefSeq	ILMN_220646	ILMN_220646	STAC	NM_016853.2	NM_016853.2		20840	118131208	NM_016853.2	Stac	NP_058549.1	ILMN_1245844	000270546	S	2410	CAGACCTGCTTCCTAGCAGTCACTGACATGTTTAAATGTGACTTTGGGAT	9	-	111463993-111464042	9qF3	Mus musculus src homology three (SH3) and cysteine rich domain (Stac), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC130287; MGC130288	MGC130287; MGC130288
Mus musculus	RefSeq	ILMN_209124	ILMN_209124	NADSYN1	NM_030221.1	NM_030221.1		78914	21313533	NM_030221.1	Nadsyn1	NP_084497.1	ILMN_1223384	002510152	S	265	CATTATCACGAATCAGACACTCTCCTGCATTCGCTCCAAGTTCTGGCTGC	7	-	151005044-151005093	7qF5	Mus musculus NAD synthetase 1 (Nadsyn1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence ISA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the reaction: ATP + deamido-NAD+ + L-glutamine + H2O = AMP + diphosphate + NAD+ + L-glutamate [goid 3952] [evidence ISA]; Catalysis of the reaction: ATP + deamido-NAD+ + NH3 = AMP + diphosphate + NAD+ [goid 8795] [evidence ISA]	9130012B15Rik	9130012B15Rik
Mus musculus	RefSeq	ILMN_209124	ILMN_209124	NADSYN1	NM_030221.1	NM_030221.1		78914	21313533	NM_030221.1	Nadsyn1	NP_084497.1	ILMN_2592767	007510367	S	2299	GCCGGCACAGCCTGACCAGATCTTAGTTACCTTTTAAGGAAGAGAGATTT	7	-	150990019-150990054:150991820-150991833	7qF5	Mus musculus NAD synthetase 1 (Nadsyn1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence ISA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the reaction: ATP + deamido-NAD+ + L-glutamine + H2O = AMP + diphosphate + NAD+ + L-glutamate [goid 3952] [evidence ISA]; Catalysis of the reaction: ATP + deamido-NAD+ + NH3 = AMP + diphosphate + NAD+ [goid 8795] [evidence ISA]	9130012B15Rik	9130012B15Rik
Mus musculus	RefSeq	ILMN_209124	ILMN_209124	NADSYN1	NM_030221.1	NM_030221.1		78914	21313533	NM_030221.1	Nadsyn1	NP_084497.1	ILMN_2853739	001300465	S	2446	CCTACATGCATGCCTGGTACCCACAGAAGCCAGAAGAGGGCATTAGGTCC	7	-	150989681-150989727:150989919-150989921	7qF5	Mus musculus NAD synthetase 1 (Nadsyn1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence ISA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the reaction: ATP + deamido-NAD+ + L-glutamine + H2O = AMP + diphosphate + NAD+ + L-glutamate [goid 3952] [evidence ISA]; Catalysis of the reaction: ATP + deamido-NAD+ + NH3 = AMP + diphosphate + NAD+ [goid 8795] [evidence ISA]	9130012B15Rik	9130012B15Rik
Mus musculus	RefSeq	ILMN_219102	ILMN_235846	CCDC135	NM_001042715.3	NM_001042715.3		330830	154091012	NM_001042715.3	Ccdc135	NP_001036180.2	ILMN_2704335	001690592	S	640	GTTGATTGGCTCCGGCTATGATGCCTACTGCGTCAATGGCTATGGCTCAC				8qD1	Mus musculus coiled-coil domain containing 135 (Ccdc135), mRNA.				SRG-L; SRG-S; Gm770	SRG-L; SRG-S; Gm770
Mus musculus	MEEBO	ILMN_218039	ILMN_218039	4933430N04RIK	scl35119.3.1_148				51763922	XM_489220	4933430N04Rik		ILMN_2690804	004920440	S	1079	CACCTTGTATCCATGCATGAAGTGCTCAAGTAACCAAAGATTCAGTTGCT										
Mus musculus	RefSeq	ILMN_219060	ILMN_219060	LUC7L	NM_025881.2	NM_025881.2		66978	114158673	NM_025881.2	Luc7l	NP_080157.1	ILMN_2703748	004780445	S	1317	GGGCAGTGAGCTCTCTCACATGGCTCCGCTTTGCTGGGCTTTACCTACTT	17	+	26417295-26417344	17qA3.3	Mus musculus Luc7 homolog (S. cerevisiae)-like (Luc7l), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]	1810045C04Rik; 2410018D03Rik	1810045C04Rik; 2410018D03Rik
Mus musculus	RefSeq	ILMN_200715	ILMN_200715	LOC384502	XM_357677.1	XM_357677.1			38085390	XM_357677.1	LOC384502		ILMN_2539747	004480594	S	122	TGAGGAGAGTGGAGTCCGGGTGCCATCCACTTGTTCAGGTGCTCTTCCCA										
Mus musculus	RefSeq	ILMN_210532	ILMN_210532	ATIC	NM_026195.1	NM_026195.1		108147	27229047	NM_026195.1	Atic	NP_080471.1	ILMN_2606567	003830564	S	1525	GGTGAAGAGAGCAGAGATCTCCAATGCGATTGATCAGTATGTGACCGGCA	1	+	71509947-71509996	1qC3	Mus musculus 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase (Atic), mRNA.		The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate [goid 6188] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide [goid 3937] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide = tetrahydrofolate + 5'-phosphoribosyl-5-formamido-4-imidazolecarboxamide [goid 4643] [evidence IEA]	AA536954; AW212393; 2610509C24Rik	AA536954; AW212393; 2610509C24Rik
Mus musculus	RefSeq	ILMN_210532	ILMN_210532	ATIC	NM_026195.1	NM_026195.1		108147	27229047	NM_026195.1	Atic	NP_080471.1	ILMN_3070951	001010754	I	2245	CCCCTGGGAACTGGGTCCTTAACTAGATCTAAATGCTGGGACTGCTCTTT	1	+	71512263-71512312	1qC3	Mus musculus 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase (Atic), mRNA.		The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate [goid 6188] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide [goid 3937] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide = tetrahydrofolate + 5'-phosphoribosyl-5-formamido-4-imidazolecarboxamide [goid 4643] [evidence IEA]	AA536954; AW212393; 2610509C24Rik	AA536954; AW212393; 2610509C24Rik
Mus musculus	Riken	ILMN_202847	ILMN_202847	STAT4	ri|A130029B15|PX00121L23|AK037598|1025					AK037598	Stat4		ILMN_1215254	000990228	S	806	GAGTACTCTAAGGAGCTAAGATCTCAGGACTGGGTGTGGTGGCACGTGCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221746	ILMN_221746	OLFR427	NM_207158.1	NM_207158.1		259162	46391076	NM_207158.1	Olfr427	NP_997041.1	ILMN_2739797	006980482	S	660	CATCACCGTAGTCCTGAAGATTCCATCTGGTGAGAGCCGTCAGAAGGCAT					Mus musculus olfactory receptor 427 (Olfr427), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR105-9; MGC123699; MOR105-7; MGC123740; MGC123739; MGC123698	MOR105-9; MGC123699; MOR105-7; MGC123740; MGC123739; MGC123698
Mus musculus	RefSeq	ILMN_202652	ILMN_251588	PHF14	NM_029404.2	NM_029404.2		75725	142354458	NM_029404.2	Phf14	NP_083680.1	ILMN_2551246	006940228	S	2674	ATGCCGAGAAAGACGAAAAACAGTTACTGGCAATGCTCAGAGTGTGACCA	6	+	11942089-11942117:11947026-11947046	6qA1	Mus musculus PHD finger protein 14 (Phf14), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0783; 1110001C23Rik; 5730446A07Rik; 4932409F11Rik; KIAA0783; AV297001; AA623952	mKIAA0783; 1110001C23Rik; 5730446A07Rik; 4932409F11Rik; KIAA0783; AV297001; AA623952
Mus musculus	RefSeq	ILMN_189731	ILMN_251588	PHF14	NM_029404.2	NM_029404.2		75725	142354458	NM_029404.2	Phf14	NP_083680.1	ILMN_2725807	005810347	S	533	GGAGTGGTAATGGAAGTGAAGATCCTTCAAAGGACAGTGGAGAAGGTTCC	6	+	11883262-11883311	6qA1	Mus musculus PHD finger protein 14 (Phf14), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0783; 1110001C23Rik; 5730446A07Rik; 4932409F11Rik; KIAA0783; AV297001; AA623952	mKIAA0783; 1110001C23Rik; 5730446A07Rik; 4932409F11Rik; KIAA0783; AV297001; AA623952
Mus musculus	Riken	ILMN_204169	ILMN_204169	C820007E08RIK	ri|C820007E08|PX00088O01|AK050521|1876					AK050521	C820007E08Rik		ILMN_1216670	002060086	S	1527	GCCATCTGGGAGGGAGAGAGGTAGGGAGAGCGGAAGTTGGAGATCAGTGT										
Mus musculus	RefSeq	ILMN_194321	ILMN_256297	4930560E09RIK	XM_283466.6	XM_283466.6		67737	94402174	XM_283466.6	4930560E09Rik	XP_283466.3	ILMN_1232260	000010524	S	1534	AATCTGCTGAAAGGCCTGTGCCTGAAGCACTTGGGCAAGCACCTGAAGGC	17	+	80616787-80616836	17qE3	PREDICTED: Mus musculus RIKEN cDNA 4930560E09 gene (4930560E09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194321	ILMN_256297	4930560E09RIK	XM_283466.6	XM_283466.6		67737	94402174	XM_283466.6	4930560E09Rik	XP_283466.3	ILMN_1257809	006660379	S	1783	GCCCTTGAACAAATAGCTAAATTAGAAAAGTGATTCTTAACCCAGTGTGC	17	+	80617036-80617068:80617069-80617085	17qE3	PREDICTED: Mus musculus RIKEN cDNA 4930560E09 gene (4930560E09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_233023	ILMN_233023	A430090E18RIK	NM_177578.2	NM_177578.2		195564	31341434	NM_177578.2	A430090E18Rik	NP_808246.1	ILMN_3147447	001110730	A	300	GGCTTAGAGAGGCCAGTCCTTGCCCCATTAGGTGGAATCCTTGAACTCAG	4	+	111751706-111751755	4qD1	Mus musculus RIKEN cDNA A430090E18 gene (A430090E18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_195554	ILMN_242724	AI931714	NM_001081240.3	NM_001081240.3		102182	133778995	NM_001081240.3	AI931714	NP_001074709.1	ILMN_2516620	001660435	S	2706	CAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGC	8	+	80105162-80105211	8qC1	Mus musculus expressed sequence AI931714 (AI931714), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IEA]	Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197145	ILMN_197145	LOC329139	XM_283581.1	XM_283581.1			28478923	XM_283581.1	LOC329139		ILMN_2527074	000510711	S	445	GAAGCGTACCTCTGAAAGAGCAACAAAAGATGCTGGAACTATTGCTGGCC										
Mus musculus	Riken	ILMN_202024	ILMN_202024	SEL1H	ri|1600026C08|ZX00050I23|AK005544|617					AK005544	Sel1h		ILMN_2546455	005870286	S	501	GGGAGTGTAGACAAATGCTAGTGGGAGCTGGTCTTGCTGATCGTTAACCA										
Mus musculus	Riken	ILMN_206870	ILMN_206870	D930043N06RIK	ri|D930043N06|PX00203E24|AK086648|4177					AK086648	D930043N06Rik		ILMN_2583302	005390670	S	3756	GAGGAAACCAACGATTGTAGCCACAGAGGGAGATCTGCTGAGTGCTCGGC										
Mus musculus	RefSeq	ILMN_229864	ILMN_229864	LOC381483	NM_001033772.1	NM_001033772.1		381483	85702078	NM_001033772.1	LOC381483	NP_001028944.1	ILMN_2814524	000670168	S	325	GAAGACGACACGTGCTCTATGTGCTTTCTGCCTTGGCTGTCCCAGGAAAA	3	+	149277482-149277511:149277986-149278005	3qH3	Mus musculus hypothetical LOC381483 (LOC381483), mRNA.					
Mus musculus	Riken	ILMN_202977	ILMN_202977	PGLYRP	ri|A730072G01|PX00151H04|AK043227|1009					AK043227	Pglyrp		ILMN_1250599	003610397	S	725	TGGGGTGGACCAAGAACCCACTGGCTCCGTGTGTAAAGGTGTTTCCTAGC										
Mus musculus	RefSeq	ILMN_190865	ILMN_254386	CHD5	NM_001081376.1	NM_001081376.1		269610	124487024	NM_001081376.1	Chd5	NP_001074845.1	ILMN_2491243	004050358	S	6326	CTGGCTGCGCAAGAGTCCAGAAGTGCCACCTCATCGTAGTTGAAGCCTTC	4	+	151761143-151761192	4qE2	Mus musculus chromodomain helicase DNA binding protein 5 (Chd5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	AW060752; B230399N07Rik; 4930532L22Rik	AW060752; B230399N07Rik; 4930532L22Rik
Mus musculus	RefSeq	ILMN_190865	ILMN_254386	CHD5	NM_001081376.1	NM_001081376.1		269610	124487024	NM_001081376.1	Chd5	NP_001074845.1	ILMN_2644528	007510706	S	6053	TCTCAGATGTACAACAACAGCTTTGGGCCCAACTTCCGGGGCCCTGGACC	4	+	151759848-151759897	4qE2	Mus musculus chromodomain helicase DNA binding protein 5 (Chd5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	AW060752; B230399N07Rik; 4930532L22Rik	AW060752; B230399N07Rik; 4930532L22Rik
Mus musculus	RefSeq	ILMN_254386	ILMN_254386	CHD5	NM_001081376.1	NM_001081376.1		269610	124487024	NM_001081376.1	Chd5	NP_001074845.1	ILMN_3145636	001070133	A	9266	GGGCTGGCATCTGTCCTACCCTTGCCCAATCGAGCACACCCTGATGAAGT	4	+	151764083-151764132	4qE2	Mus musculus chromodomain helicase DNA binding protein 5 (Chd5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	AW060752; B230399N07Rik; 4930532L22Rik	AW060752; B230399N07Rik; 4930532L22Rik
Mus musculus	RefSeq	ILMN_190865	ILMN_254386	CHD5	NM_001081376.1	NM_001081376.1		269610	124487024	NM_001081376.1	Chd5	NP_001074845.1	ILMN_1223724	006620482	S	9380	CCCTCTGAAGGCTGGGCAGACCAGTGGTATCTCCACTTGTATTCTCTGTG	4	+	151764197-151764246	4qE2	Mus musculus chromodomain helicase DNA binding protein 5 (Chd5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	AW060752; B230399N07Rik; 4930532L22Rik	AW060752; B230399N07Rik; 4930532L22Rik
Mus musculus	RefSeq	ILMN_190865	ILMN_254386	CHD5	NM_001081376.1	NM_001081376.1		269610	124487024	NM_001081376.1	Chd5	NP_001074845.1	ILMN_2707217	007320070	S	528	CAGACAACGAGGAGGACCTGGAAGAGAAGTCAGAGAGCGAAGGTAGCGAC	4	+	151727669-151727718	4qE2	Mus musculus chromodomain helicase DNA binding protein 5 (Chd5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	AW060752; B230399N07Rik; 4930532L22Rik	AW060752; B230399N07Rik; 4930532L22Rik
Mus musculus	MEEBO	ILMN_210801	ILMN_210801	LST1	scl016988.2_22	XM_359281.1			38083088	XM_359281.1	Lst1		ILMN_2609323	005860154	S	304	AAAGAAGACCTCAGCACTGACTATGCCTGCATCGCCAGGAGCACACCCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IDA]			
Mus musculus	MEEBO	ILMN_185730	ILMN_185730	A030003K02RIK	scl0109224.1_250						A030003K02Rik		ILMN_2429521	001990332	S	10	AGAGGGGAAGTCCTTGTAGGGTGGGAACCATGGAAAGGAGTGGGTAGCGA										
Mus musculus	RefSeq	ILMN_199521	ILMN_199521	LOC383608	XM_357151.1	XM_357151.1			38073939	XM_357151.1	LOC383608		ILMN_2535517	002480196	S	263	CTGCTCTCCCGCAGCCCACTTGGGATGATTCGGCAAAGGTCACCCTCTAT										
Mus musculus	RefSeq	ILMN_195747	ILMN_246920	RSBN1L	NM_001080977.1	NM_001080977.1		242860	124430546	NM_001080977.1	Rsbn1l	NP_001074446.1	ILMN_2518345	006250243	S	5265	CTTAGGTTTAACTTTTAAGGAATGTACTTAATGTATTCAAAGTAGGATTT	5	-	20399081-20399130	5qA3	Mus musculus round spermatid basic protein 1-like (Rsbn1l), mRNA.				8430412F05Rik; C330002G24Rik; AI447441	8430412F05Rik; C330002G24Rik; AI447441
Mus musculus	RefSeq	ILMN_209746	ILMN_246920	RSBN1L	NM_001080977.1	NM_001080977.1		242860	124430546	NM_001080977.1	Rsbn1l	NP_001074446.1	ILMN_1252270	004850626	S	2299	CACGGAAGGCAAGAACAGTAAGGCGAGACTGGATCGCGCTCAGTTTTCAG	5	-	20402047-20402096	5qA3	Mus musculus round spermatid basic protein 1-like (Rsbn1l), mRNA.				8430412F05Rik; C330002G24Rik; AI447441	8430412F05Rik; C330002G24Rik; AI447441
Mus musculus	RefSeq	ILMN_199074	ILMN_199074	LOC237547	XM_137253.2	XM_137253.2			38090766	XM_137253.2	LOC237547		ILMN_1258278	002490315	S	662	TAGAGCCCAGTTGGGAGGAAGGGCTCGCTCTCCTTGAGAAAAAGGCTCCC										
Mus musculus	RefSeq	ILMN_198429	ILMN_198429	LOC381220	XM_358528.1	XM_358528.1			38085080	XM_358528.1	LOC381220		ILMN_1259464	005560500	S	754	GGGGGTTGTAACTTGAATCCCGTTCTGAAAGCCCCCGCCGTGCTCCCTTA										
Mus musculus	RefSeq	ILMN_212433	ILMN_212433	SYNGR2	NM_009304.1	NM_009304.1		20973	7106428	NM_009304.1	Syngr2	NP_033330.1	ILMN_1244874	005570491	S	402	TCTGCTTCCTGACCAACCAGTGGGCAGCCACCAAACCTCAAGATGTCCGG	11	+	117674400-117674449	11qE2	Mus musculus synaptogyrin 2 (Syngr2), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISA]		cellugyrin; Clast2	cellugyrin; Clast2
Mus musculus	RefSeq	ILMN_212433	ILMN_212433	SYNGR2	NM_009304.1	NM_009304.1		20973	7106428	NM_009304.1	Syngr2	NP_033330.1	ILMN_2706232	001240156	S	401	TTCTGCTTCCTGACCAACCAGTGGGCAGCCACCAAACCTCAAGATGTCCG	11	+	117674399-117674448	11qE2	Mus musculus synaptogyrin 2 (Syngr2), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISA]		cellugyrin; Clast2	cellugyrin; Clast2
Mus musculus	RefSeq	ILMN_212433	ILMN_212433	SYNGR2	NM_009304.1	NM_009304.1		20973	7106428	NM_009304.1	Syngr2	NP_033330.1	ILMN_2706231	000050274	S	405	TGCTTCCTGACCAACCAGTGGGCAGCCACCAAACCTCAAGATGTCCGGGT	11	+	117674403-117674452	11qE2	Mus musculus synaptogyrin 2 (Syngr2), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISA]		cellugyrin; Clast2	cellugyrin; Clast2
Mus musculus	RefSeq	ILMN_197151	ILMN_197151	LOC380831	XM_358437.1	XM_358437.1			38074323	XM_358437.1	LOC380831		ILMN_2527100	001980358	S	328	ACTGGATCTGGGGCTGTTCCTGACTCTATTGCCTCAAGGGGGGAGGGAGT										
Mus musculus	RefSeq	ILMN_236954	ILMN_236954	ZCCHC8	NM_027494.1	NM_027494.1		70650	21312623	NM_027494.1	Zcchc8	NP_081770.2	ILMN_2925974	000650685	S	2548	CAATCAGGGATCGGCAGCTTGCTCCTGCTTGCTCGGGGTATTTTTGTAAG	5	-	123960504-123960553	5qF	Mus musculus zinc finger, CCHC domain containing 8 (Zcchc8), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	5730565F05Rik	5730565F05Rik
Mus musculus	RefSeq	ILMN_228845	ILMN_228845	PPFIBP1	NM_026221.1	NM_026221.1		67533	49274605	NM_026221.1	Ppfibp1	NP_080497.1	ILMN_3072009	001340403	I	120	TCCCGGGAGGCGGAACTGCAACTTGTGGAGCTCGGCGGCCCTCCGCCTCA	6	+	146837155-146837204	6qG3	Mus musculus PTPRF interacting protein, binding protein 1 (liprin beta 1) (Ppfibp1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the integration of lambdoid phage DNA during establishment, probably by forming a transient DNA-protein link [goid 8907] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AW214454; AW261454; 4632409B19Rik	AW214454; AW261454; 4632409B19Rik
Mus musculus	RefSeq	ILMN_228845	ILMN_228845	PPFIBP1	NM_026221.1	NM_026221.1		67533	49274605	NM_026221.1	Ppfibp1	NP_080497.1	ILMN_3150724	000160577	A	2752	GCGCAGACATTTGGCGACCCATTTCAACCTTCTGATTGGTGCAGAGGCCC	6	+	146975901-146975950	6qG3	Mus musculus PTPRF interacting protein, binding protein 1 (liprin beta 1) (Ppfibp1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the integration of lambdoid phage DNA during establishment, probably by forming a transient DNA-protein link [goid 8907] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AW214454; AW261454; 4632409B19Rik	AW214454; AW261454; 4632409B19Rik
Mus musculus	Riken	ILMN_202165	ILMN_202165	CCNC	ri|3110023N18|ZX00071I05|AK014079|1246					AK014079	Ccnc		ILMN_1239775	001340270	S	887	CACCCTGAAGAATCCCGTAGTGGACCACTTGGAAGTAAAGCATTGGACAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_211463	ILMN_211463	ITGA3	NM_013565.2	NM_013565.2		16400	34328215	NM_013565.2	Itga3	NP_038593.1	ILMN_2616164	002360703	S	4775	CACGGTACTATAACAACTTCCCCGATCCTGTGCCTTCTTTGTATATGGGC	11	-	94905824-94905873	11qD	Mus musculus integrin alpha 3 (Itga3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA407068; CD49C	AA407068; CD49C
Mus musculus	RefSeq	ILMN_199470	ILMN_199470	LOC383530	XM_357106.1	XM_357106.1			38049622	XM_357106.1	LOC383530		ILMN_2535323	003990041	S	218	AAGTAGGGTACCGTAGCCTCCACGCGGGGAGAACTTCGTTGGCTTCTCCT										
Mus musculus	RefSeq	ILMN_215591	ILMN_215591	TMEM45B	NM_144936.1	NM_144936.1		235135	21450348	NM_144936.1	Tmem45b	NP_659185.1	ILMN_2661366	007570053	S	1108	ACTCCAAGGCTTGCCTTATGTGCTCCTAGGGCTCTATATGCTGCATCCCT	9	-	31234198-31234247	9qA4	Mus musculus transmembrane protein 45b (Tmem45b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC25912; MGC37581; BC018222	MGC25912; MGC37581; BC018222
Mus musculus	RefSeq	ILMN_221450	ILMN_221450	GP2	NM_025989.1	NM_025989.1		67133	13385493	NM_025989.1	Gp2	NP_080265.2	ILMN_2904435	002490095	S	1753	GAGCACCTGGCCTTAAAGTTCTTCCCTCTGGCAATGGCTCACACCCATCC	7	-	119233868-119233917	7qF2	Mus musculus glycoprotein 2 (zymogen granule membrane) (Gp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			2310037I18Rik; AV060639; MGC141315	2310037I18Rik; AV060639; MGC141315
Mus musculus	RefSeq	ILMN_216700	ILMN_216700	ITGB1BP1	NM_008403.2	NM_008403.2		16413	31560678	NM_008403.2	Itgb1bp1	NP_032429.1	ILMN_2924243	004760110	S	630	CGGCCTGGGAGCTGGGAAAAGCTTGCTGGCACTCAAGACCACAGATGCAA	12	-	21517951-21518000	12qA1.2	Mus musculus integrin beta 1 binding protein 1 (Itgb1bp1), mRNA.		Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence ISO]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence ISO]; Interacting selectively with an integrin [goid 5178] [evidence ISO]	AU019480; bodenin; AI449260	AU019480; bodenin; AI449260
Mus musculus	RefSeq	ILMN_188977	ILMN_188977	UBE2G2	NM_019803.3	NM_019803.3		22213	118130569	NM_019803.3	Ube2g2	NP_062777.2	ILMN_2521109	003370072	S	587	AACCTGTGGCGACAGCGCTGCCATGCCAACACCAACACAGGCAGTGCAGA	10	+	77107340-77107389	10qC1	Mus musculus ubiquitin-conjugating enzyme E2G 2 (Ube2g2), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ubc7p; UBC7; 1110003O05Rik; D10Xrf369	Ubc7p; UBC7; 1110003O05Rik; D10Xrf369
Mus musculus	MEEBO	ILMN_188468	ILMN_188468	A130001G05RIK	scl19620.2.2105_203						A130001G05Rik		ILMN_1239390	002490735	S	12	CGGTGTTCGTGTAATCTCATGCTGGGTAATTACAAGTTTTAATTGCTGCC										
Mus musculus	MEEBO	ILMN_190999	ILMN_190999	TMC1	scl52663.22_173				20127391	NM_028953	Tmc1		ILMN_2489784	004230020	S	18	CACCATCATGGCCGCAGTCATGACCATCTGGCAAGGAATCATCAGCCCTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]			
Mus musculus	RefSeq	ILMN_216617	ILMN_247802	SAFB	XM_924956.2	XM_924956.2		224903	94403026	XM_924956.2	Safb	XP_930049.2	ILMN_2673274	005090717	S	2736	TGAGAGGAGCATGTCTGGCCACTCGGGGCCTGGTCACATGATGAACCGTG				17qD	PREDICTED: Mus musculus scaffold attachment factor B, transcript variant 18 (Safb), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_186242	ILMN_186242	SLCO2A1	scl36546.14_303				15217192	NM_033314	Slco2a1		ILMN_2433848	003120324	S	20	CTCATGCTCTTGGGAGGCCCAGTCACCGTCCTTGAGTTCATATCCAGAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of prostaglandins into, out of, within or between cells [goid 15732] [evidence IDA]	Catalysis of the transfer of prostaglandins from one side of the membrane to the other. A prostaglandin is any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 15132] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201311	ILMN_210709	TMTC2	NM_177368.4	NM_177368.4		278279	93004089	NM_177368.4	Tmtc2	NP_796342.2	ILMN_2541844	005910161	S	3116	CAGAAGGCTGAGGCCAACTACCTGAGGGCCCTGCAACTCAAGCCAGATGA	10	-	104627226-104627275	10qD1	Mus musculus transmembrane and tetratricopeptide repeat containing 2 (Tmtc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	8430438D04Rik; D330034A10Rik; MGC116613	8430438D04Rik; D330034A10Rik; MGC116613
Mus musculus	RefSeq	ILMN_215233	ILMN_210709	TMTC2	NM_177368.4	NM_177368.4		278279	93004089	NM_177368.4	Tmtc2	NP_796342.2	ILMN_2657031	003840022	S	4278	CACCAGTGCGGATAAATCCTGGAGGGTTGTCTCATTTTGCTCTTCCTGAA	10	-	104626064-104626113	10qD1	Mus musculus transmembrane and tetratricopeptide repeat containing 2 (Tmtc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	8430438D04Rik; D330034A10Rik; MGC116613	8430438D04Rik; D330034A10Rik; MGC116613
Mus musculus	RefSeq	ILMN_216917	ILMN_216917	FOXO4	NM_018789.1	NM_018789.1		54601	9055157	NM_018789.1	Foxo4	NP_061259.1	ILMN_2676908	002060112	S	1910	GACCCTACTTTAGAGCTAAGGATTGGTGGCAACACACTCAAGTGTTGAGG	X	+	98454960-98455009	XqC3-qD	Mus musculus forkhead box O4 (Foxo4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; A signal transduction-based surveillance mechanism that acts during a mitotic cell cycle to ensure accurate chromosome segregation by preventing entry into mitosis in the presence of damaged DNA [goid 7095] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	afx; Mllt7; MGC117660; Afxh; Foxo4	afx; Mllt7; MGC117660; Afxh; Foxo4
Mus musculus	RefSeq	ILMN_228594	ILMN_228594	SSXB3	NM_198898.2	NM_198898.2		278174	118130902	NM_198898.2	Ssxb3	NP_942601.1	ILMN_3142650	000240091	A	510	TATATTCAGAGATTAGTGATCCTGAAGAGGAAGAAGATGATGATTACTAA	X	-	8161118-8161118:8161119-8161167	XqA1.1	Mus musculus synovial sarcoma, X member B, breakpoint 3 (Ssxb3), mRNA.					
Mus musculus	RefSeq	ILMN_228594	ILMN_228594	SSXB3	NM_198898.2	NM_198898.2		278174	118130902	NM_198898.2	Ssxb3	NP_942601.1	ILMN_3064763	005360435	I	7	TGAAGAAGACAAGATTGTGTCTTTTCAAAATCACACTGACATGGAAACAG	X	-	8166316-8166326:8166327-8166365	XqA1.1	Mus musculus synovial sarcoma, X member B, breakpoint 3 (Ssxb3), mRNA.					
Mus musculus	RefSeq	ILMN_219482	ILMN_219482	TRMT12	NM_026642.2	NM_026642.2		68260	118150644	NM_026642.2	Trmt12	NP_080918.2	ILMN_2960243	006180563	S	3968	ACAGTCAGGTAAGCTAGTGTTGGCACGGAGCAGACATTCCAAGGAGGCTG	15	+	58708171-58708220	15qD1	Mus musculus tRNA methyltranferase 12 homolog (S. cerevisiae) (Trmt12), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AI449275; 4632406N01Rik	AI449275; 4632406N01Rik
Mus musculus	MEEBO	ILMN_184271	ILMN_184271	ZFP74	scl072723.1_191				31341627	NM_178384	Zfp74		ILMN_2417272	006200470	S	18	CATTATCATTAATGCAGAGGTGGATCAATATGTTTATTTCTATGATAGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	Riken	ILMN_204528	ILMN_204528	B230346A16RIK	ri|B230346A16|PX00161E12|AK046166|2128					AK046166	B230346A16Rik		ILMN_1247010	006220673	S	1784	GCAAGCTTTCCTTCCCTAAGCAACACCCTGGCTCCAAACAGGGCACTATG										
Mus musculus	Riken	ILMN_202002	ILMN_202002	2010004N17RIK	ri|2010004N17|ZX00043B24|AK008106|1914					AK008106	2010004N17Rik		ILMN_1237109	005550008	S	259	GCCGGCCTGCGACGGCCCTAAGGGTGGAACTACTCTGCCGTGGTTAAATA										
Mus musculus	RefSeq	ILMN_214806	ILMN_214806	LY75	NM_013825.3	NM_013825.3		17076	148747178	NM_013825.3	Ly75	NP_038853.2	ILMN_1258336	002100176	S	4930	GAAACCTGGAGAAAAGTCCATTGCTCACGTGGCTATGCAAGAGCTGTCTG				2qC1.1	Mus musculus lymphocyte antigen 75 (Ly75), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DEC205; CD205; DEC-205	DEC205; CD205; DEC-205
Mus musculus	RefSeq	ILMN_188246	ILMN_327411	RASA3	NM_009025.2	NM_009025.2		19414	120444917	NM_009025.2	Rasa3	NP_033051.2	ILMN_2637714	004120538	S	3984	GTCAGTTTGGACACAGCAGGCCCCTTGTACTGAACTTCTTTTTAACTTGG	8|NT_114727.1	+	30058-30107	8qA1.1	Mus musculus RAS p21 protein activator 3 (Rasa3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	GAPIII; E130011G04; AI326412; C86362	GAPIII; E130011G04; AI326412; C86362
Mus musculus	RefSeq	ILMN_221231	ILMN_221231	ZBTB38	NM_175537.3	NM_175537.3		245007	117938319	NM_175537.3	Zbtb38	NP_780746.2	ILMN_1250618	000870040	S	3178	AGCATTTGATGAAGTGAGTGACCAGGACTCCACTGATAAGCCGTGGCGCC	9	-	96586705-96586754	9qE3.3	Mus musculus zinc finger and BTB domain containing 38 (Zbtb38), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	A930014K01Rik; CIBZ	A930014K01Rik; CIBZ
Mus musculus	RefSeq	ILMN_184337	ILMN_184337	ZMAT2	NM_025594.3	NM_025594.3		66492	118130302	NM_025594.3	Zmat2	NP_079870.1	ILMN_1229609	006980020	S	1562	CTTAGTGCGAGTTTTCCCCTCTGCTAATAGGATCTGTGCCCTTGGGAGTC	18	+	36958619-36958668	18qB2	Mus musculus zinc finger, matrin type 2 (Zmat2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2610510D14Rik; 2900082I05Rik	2610510D14Rik; 2900082I05Rik
Mus musculus	Riken	ILMN_206030	ILMN_206030	RAD18	ri|C230087E17|PX00177O18|AK048975|2004					AK048975	Rad18		ILMN_1255532	006520343	S	1666	GTATGGCCCTGGCTGTTCCTGAACTTGCTACATAGACCTGGCTGGCTTAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200558	ILMN_200558	LOC381751	XM_358650.1	XM_358650.1			38083680	XM_358650.1	LOC381751		ILMN_1240280	001980259	S	43	AGAGGGTCAAAAGCAGGTCACCAACACACTGCTCCAAGAACAACCACAGA										
Mus musculus	RefSeq	ILMN_250953	ILMN_250953	PODNL1	NM_001013384.1	NM_001013384.1		244550	61656183	NM_001013384.1	Podnl1	NP_001013402.1	ILMN_2822934	006980170	S	1857	GCCCTGGCCTAAGCTCTGAGACTGTGGACTAAGAAAGCTCTCAGCTGCGG	8	+	86656193-86656242	8qC3	Mus musculus podocan-like 1 (Podnl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5832418A03Rik; Gm506	5832418A03Rik; Gm506
Mus musculus	RefSeq	ILMN_209034	ILMN_234572	OLFR281	NM_146280.1	NM_146280.1		258277	22129726	NM_146280.1	Olfr281	NP_666392.1	ILMN_1255489	000630601	S	739	GCCGTGGTCCTGTTTTTCGGGTCCGGCTTGATTCGTTATCTTATGCCCAC	15	+	98287481-98287530	15qF1	Mus musculus olfactory receptor 281 (Olfr281), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR160-5	MOR160-5
Mus musculus	RefSeq	ILMN_187327	ILMN_187327	TRERF1	NM_172622.1	NM_172622.1		224829	27369895	NM_172622.1	Trerf1	NP_766210.1	ILMN_2949338	003780403	S	3847	AGCGGTCCTTTTCTTCAGGTTAAGGGAGGGGAAAAATCCAGTTCTTTCTC	17	+	47496290-47496339	17qC	Mus musculus transcriptional regulating factor 1 (Trerf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9430096I18Rik; Trep132; Trep-132; MGC118525; RAPA; B830015H24	9430096I18Rik; Trep132; Trep-132; MGC118525; RAPA; B830015H24
Mus musculus	RefSeq	ILMN_184422	ILMN_232784	ZFP78	NM_001025163.1	NM_001025163.1		330463	68448538	NM_001025163.1	Zfp78	NP_001020334.1	ILMN_1260400	007000672	S	59	CAGTTGTTCTCCAAGAGAGAAGCCAGGAGGAGGATAAGACATGACAGTTG	7	+	6324031-6324070:6324071-6324080	7qA1	Mus musculus zinc finger protein 78 (Zfp78), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	A330079D15; KRAB12; Zfp77; MGC102644	A330079D15; KRAB12; Zfp77; MGC102644
Mus musculus	RefSeq	ILMN_184422	ILMN_232784	ZFP78	NM_001025163.1	NM_001025163.1		330463	68448538	NM_001025163.1	Zfp78	NP_001020334.1	ILMN_2418496	007550092	S	390	CTCAGGCAGTTGGTGTTTGAGGATGTGGCAGTGGAGAACACTACAAGTCT	7	+	6330954-6331003	7qA1	Mus musculus zinc finger protein 78 (Zfp78), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	A330079D15; KRAB12; Zfp77; MGC102644	A330079D15; KRAB12; Zfp77; MGC102644
Mus musculus	RefSeq	ILMN_243248	ILMN_243248	6430550H21RIK	NM_172930.2	NM_172930.2		245386	40254260	NM_172930.2	6430550H21Rik	NP_766518.2	ILMN_2901409	007160142	S	2556	GGCAGCAGACCAATGCTGGTGCTCCCATCTACCTTGTAGACACCTGGTCA	X	-	35551215-35551264	XqA3.3	Mus musculus RIKEN cDNA 6430550H21 gene (6430550H21Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4933417N17	4933417N17
Mus musculus	RefSeq	ILMN_213153	ILMN_213153	IDUA	NM_008325.2	NM_008325.2		15932	142382287	NM_008325.2	Idua	NP_032351.1	ILMN_2676924	000070605	S	163	GCCTCACGACCAGGCTGACCAGTACGACCTTAGTTGGGACCAGCAACTGA	5	+	109099147-109099196	5qF	Mus musculus iduronidase, alpha-L- (Idua), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; Any biological process involved in the maintenance of an internal equilibrium of a chemical [goid 48878] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the hydrolysis of alpha-L-iduronosidic linkages in desulfated dermatan [goid 3940] [evidence IEA]	6030426D08	6030426D08
Mus musculus	RefSeq	ILMN_216653	ILMN_216653	RBM13	NM_026453.1	NM_026453.1		67920	33468996	NM_026453.1	Rbm13	NP_080729.1	ILMN_3009908	006480735	S	1656	GGTGGACCTTTGGCTGGAAAACAGACCAACACAAGGGCTGCCGTGCGATG	8	-	32625554-32625603	8qA3	Mus musculus RNA binding motif protein 13 (Rbm13), mRNA.				AI314911; 2600016B03Rik	AI314911; 2600016B03Rik
Mus musculus	RefSeq	ILMN_216653	ILMN_216653	RBM13	NM_026453.1	NM_026453.1		67920	33468996	NM_026453.1	Rbm13	NP_080729.1	ILMN_3009910	002940164	S	1451	CATGAGAGCAAACGGGCATTGATTTCTGTAAAACCTGTTTCCCCACAGCC	8	-	32625759-32625808	8qA3	Mus musculus RNA binding motif protein 13 (Rbm13), mRNA.				AI314911; 2600016B03Rik	AI314911; 2600016B03Rik
Mus musculus	Riken	ILMN_205107	ILMN_205107	D830041I17RIK	ri|D830041I17|PX00200C11|AK052921|1526					AK052921	D830041I17Rik		ILMN_1254827	000510095	S	1289	AACCCTAAAGATGAAGATGTTCCTGTTCCGGGAGCGGCCGGCTCCACAGC										
Mus musculus	RefSeq	ILMN_242118	ILMN_242118	RUFY4	NM_001034060.2	NM_001034060.2		435626	142364398	NM_001034060.2	Rufy4	NP_001029232.1	ILMN_3162839	007320072	I	2084	AGTCCCTTGAAGCACAGTGAGTCGTGACCATGAATAAGAGCAGCCCAGGG	1	+	74194575-74194624	1qC3	Mus musculus RUN and FYVE domain containing 4 (Rufy4), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	F930048N03Rik	F930048N03Rik
Mus musculus	RefSeq	ILMN_213688	ILMN_213688	DONSON	NM_021720.1	NM_021720.1		60364	29789129	NM_021720.1	Donson	NP_068366.1	ILMN_2706882	006480333	S	1496	CTGTATGCACACGAGCCAACTGCAGTTTTCAATGTTGGCCTGTCTCTGGA	16	-	91681417-91681466	16qC3.3	Mus musculus downstream neighbor of SON (Donson), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110025J21Rik; ORF60; AI845729	1110025J21Rik; ORF60; AI845729
Mus musculus	RefSeq	ILMN_213688	ILMN_213688	DONSON	NM_021720.1	NM_021720.1		60364	29789129	NM_021720.1	Donson	NP_068366.1	ILMN_2639684	002370129	S	914	GCGCTCATATCCCCTACGACAAGAGGCTTAAGAGAAGCTATGAGAAACGA	16	-	91683879-91683928	16qC3.3	Mus musculus downstream neighbor of SON (Donson), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110025J21Rik; ORF60; AI845729	1110025J21Rik; ORF60; AI845729
Mus musculus	RefSeq	ILMN_221594	ILMN_311768	LOC100045882	XM_001475083.1	XM_001475083.1		100045882	149258614	XM_001475083.1	LOC100045882	XP_001475133.1	ILMN_1246390	007040653	S	451	CTCTTCTGACGGTGGGAGAGAGTCAGGATGACTAAAATGTTAAGGGCCCG					PREDICTED: Mus musculus hypothetical protein LOC100045882 (LOC100045882), mRNA.					
Mus musculus	RefSeq	ILMN_192908	ILMN_317837	LOC100045776	XR_031987.1	XR_031987.1		100045776	149266291	XR_031987.1	LOC100045776		ILMN_2492447	002360053	S	3099	GTGCCGAGAACAAACTGTCAGCTGTCCACTGTGTAAAAACAACGTATCCT					PREDICTED: Mus musculus similar to DAZ interacting protein 1 (LOC100045776), misc RNA.					
Mus musculus	RefSeq	ILMN_195633	ILMN_317837	LOC100045776	XR_031987.1	XR_031987.1		100045776	149266291	XR_031987.1	LOC100045776		ILMN_2517315	003370050	S	418	TGCTCCGCCCCTCCAGCGCAAGCCTAGGCGGCGGACTGGCTTGCAAGCAT					PREDICTED: Mus musculus similar to DAZ interacting protein 1 (LOC100045776), misc RNA.					
Mus musculus	RefSeq	ILMN_193885	ILMN_252830	LOC640696	XM_917753.2	XM_917753.2		640696	94409885	XM_917753.2	LOC640696	XP_922846.2	ILMN_2501340	005390553	S	293	CCCACATGGAGCTCCGGAGCCTGGCATCTGAGGACTCTGCAGTCTATTAT					PREDICTED: Mus musculus similar to Ig heavy chain V-I region V35 precursor (LOC640696), mRNA.					
Mus musculus	MEEBO	ILMN_214006	ILMN_214006	6330562C20RIK	scl076193.1_200	XM_358602.1			38077883	XM_358602.1	6330562C20Rik		ILMN_2643227	000990722	S	372	GGAGAGGCCCCATGTGCACTGCGTTACATTGCCATTCCCAGCATCTCCAA										
Mus musculus	MEEBO	ILMN_223633	ILMN_223633	SYT6	scl078344.1_2	XM_149365.1			20875100	XM_149365.1	Syt6		ILMN_2766847	002600711	S	255	AATTAATTGTATCATCATTTTAAAAAATTATGTTGTTAATTACTGCTTTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IPI]		
Mus musculus	RefSeq	ILMN_187011	ILMN_250703	ENSA	NM_019561.2	NM_019561.2		56205	71061456	NM_019561.2	Ensa	NP_062507.1	ILMN_2440407	002510600	S	944	TCTAGTGTCAGAGAAAAGGAATTGTGTTCTTTAAAGCAGACGAGGTCTCT	3	+	95435807-95435856	3qF2.1	Mus musculus endosulfine alpha (Ensa), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence ISO]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO];  [goid 19870] [evidence ISO]	AI451924; 2610007F17Rik; 1700020C18Rik	AI451924; 2610007F17Rik; 1700020C18Rik
Mus musculus	RefSeq	ILMN_250703	ILMN_250703	ENSA	NM_019561.2	NM_019561.2		56205	71061456	NM_019561.2	Ensa	NP_062507.1	ILMN_3112185	004810347	A	381	CAGCTGCCAAGTGCAGGAGCAGACAAGAACCTGGTGACCGGTGACCACAT	3	+	95432520-95432569	3qF2.1	Mus musculus endosulfine alpha (Ensa), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence ISO]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO];  [goid 19870] [evidence ISO]	AI451924; 2610007F17Rik; 1700020C18Rik	AI451924; 2610007F17Rik; 1700020C18Rik
Mus musculus	MEEBO	ILMN_224215	ILMN_224215	GYK	scl0014933.2_154				46909580	NM_008194	Gyk		ILMN_2776721	001240390	S	2335	TCAGGTGTTTTACACTGTCCCACTAACTACCATAGCTTTCTGTCTGGCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 6072] [evidence IEA]; The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + glycerol = ADP + glycerol 3-phosphate [goid 4370] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	MEEBO	ILMN_220503	ILMN_220503	PLAT	scl33993.13_72				6679374	NM_008872	Plat		ILMN_2775937	002760561	S	2057	GAGGTAGACCAAAGTCTGCCCTCCTGGTCCACTATGTTGTACACTGAACC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The orderly movement of smooth muscle cells from one site to another, often during the development of a multicellular organism [goid 14909] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197610	ILMN_197610	LOC279872	XM_207309.3	XM_207309.3			38076836	XM_207309.3	LOC279872		ILMN_2528734	004670176	S	241	TTTCATCATGAAGCCTTGCATCACAATTACGAATTTATCATTGATTCTGC										
Mus musculus	RefSeq	ILMN_202790	ILMN_194929	TTC14	NM_025978.3	NM_025978.3		67120	114687666	NM_025978.3	Ttc14	NP_080254.2	ILMN_1249462	004810600	S	3830	ACAAACCAGGGAGAGCGTGTGTATGAAAAGGAGGACAGTTGTGGGGAGGG	3	+	33708314-33708363	3qA3	Mus musculus tetratricopeptide repeat domain 14 (Ttc14), transcript variant 2, mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	4931403I22Rik; AU014779; 2700016E08Rik; AI662468; 4930434D01Rik; KIAA1980; AW561908; cI-44; mKIAA1980; 4933402I15Rik	4931403I22Rik; AU014779; 2700016E08Rik; AI662468; 4930434D01Rik; KIAA1980; AW561908; cI-44; mKIAA1980; 4933402I15Rik
Mus musculus	RefSeq	ILMN_204415	ILMN_194929	TTC14	NM_025978.3	NM_025978.3		67120	114687666	NM_025978.3	Ttc14	NP_080254.2	ILMN_1217363	002970259	S	4871	CTCCAATCCCAAGAGCCCATGGTGTAGGGAGAGAACTAGCTCCCAAAGCT	3	+	33709355-33709404	3qA3	Mus musculus tetratricopeptide repeat domain 14 (Ttc14), transcript variant 2, mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	4931403I22Rik; AU014779; 2700016E08Rik; AI662468; 4930434D01Rik; KIAA1980; AW561908; cI-44; mKIAA1980; 4933402I15Rik	4931403I22Rik; AU014779; 2700016E08Rik; AI662468; 4930434D01Rik; KIAA1980; AW561908; cI-44; mKIAA1980; 4933402I15Rik
Mus musculus	RefSeq	ILMN_214020	ILMN_214020	HIST1H2AN	NM_178184.1	NM_178184.1		319170	30061364	NM_178184.1	Hist1h2an	NP_835491.1	ILMN_1248830	004610129	S	341	CCGTACTGCTGCCGAAGAAGACCGAGAGCCACCACAAGGCCAAGGGAAAA	13	-	21878697-21878746	13qA3.1	Mus musculus histone cluster 1, H2an (Hist1h2an), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197618	ILMN_238748	D830030K20RIK	XM_001003695.1	XM_001003695.1		320333	94419836	XM_001003695.1	D830030K20Rik	XP_001003695.1	ILMN_1219674	001710241	S	204	GGATGCTCCCCTGGTCTTGTCATGTGGGTCTGCTAGAAATACTTCAACCC				14qA1	PREDICTED: Mus musculus RIKEN cDNA D830030K20 gene (D830030K20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215039	ILMN_215039	CHD4	NM_145979.2	NM_145979.2		107932	118130239	NM_145979.2	Chd4	NP_666091.1	ILMN_2654822	006110193	S	654	GTTCTCAGAGGAGGATTATCGGACCCTCACCAACTACAAGGCCTTCAGCC	6	+	125051295-125051344	6qF2	Mus musculus chromodomain helicase DNA binding protein 4 (Chd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	9530019N15Rik; BC005710; KIAA4075; D6Ertd380e; mKIAA4075; MGC11769; AA617397	9530019N15Rik; BC005710; KIAA4075; D6Ertd380e; mKIAA4075; MGC11769; AA617397
Mus musculus	RefSeq	ILMN_215039	ILMN_215039	CHD4	NM_145979.2	NM_145979.2		107932	118130239	NM_145979.2	Chd4	NP_666091.1	ILMN_1236358	006980148	S	6091	AATGGTGCCCTTCCTGCTGGAGAGACAAGCAGCAGTAGCGCAGCGCCCGC	6	+	125080185-125080234	6qF2	Mus musculus chromodomain helicase DNA binding protein 4 (Chd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	9530019N15Rik; BC005710; KIAA4075; D6Ertd380e; mKIAA4075; MGC11769; AA617397	9530019N15Rik; BC005710; KIAA4075; D6Ertd380e; mKIAA4075; MGC11769; AA617397
Mus musculus	RefSeq	ILMN_215039	ILMN_215039	CHD4	NM_145979.2	NM_145979.2		107932	118130239	NM_145979.2	Chd4	NP_666091.1	ILMN_2697652	006560682	S	3663	GATGATCTACCGGTTTGTGACCCGTGCATCAGTGGAGGAGCGCATCACGC	6	+	125063959-125064008	6qF2	Mus musculus chromodomain helicase DNA binding protein 4 (Chd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	9530019N15Rik; BC005710; KIAA4075; D6Ertd380e; mKIAA4075; MGC11769; AA617397	9530019N15Rik; BC005710; KIAA4075; D6Ertd380e; mKIAA4075; MGC11769; AA617397
Mus musculus	MEEBO	ILMN_212167	ILMN_212167	INVS	scl25451.20.1_292	NM_010569.2			31982786	NM_010569.2	Invs		ILMN_2664069	001500048	S	2742	GCACAGAAGCGTCGAGGTCAGGATGCAAGCAGCTTTATGAGGACATCTGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]		
Mus musculus	Riken	ILMN_205402	ILMN_205402	E130001N18RIK	ri|E130001N18|PX00207B21|AK053254|2420					AK053254	E130001N18Rik		ILMN_2572284	002510114	S	2023	GCTGCATTCTAGGAGCCATTGTCATCATTGCAGGGACCTGGGAGAGCTCC										
Mus musculus	RefSeq	ILMN_197978	ILMN_240395	LOC672474	XM_993721.1	XM_993721.1		672474	94401235	XM_993721.1	LOC672474	XP_998815.1	ILMN_1232305	002940544	S	467	CAGCCCAGGCTCCCAAAGGTGCTCAAGGTCCCTGTGAAGACCCCATAGAA					PREDICTED: Mus musculus similar to 60S ribosomal protein L29 (LOC672474), mRNA.					
Mus musculus	RefSeq	ILMN_197857	ILMN_318422	OTTMUSG00000010333	XR_032378.1	XR_032378.1		277667	149253263	XR_032378.1	OTTMUSG00000010333		ILMN_1258764	007570072	S	1683	GAGACACACTAGAGGCAAGATCCTCCTGTGAGATGGTGAACGAATGTTGC	4	-	143286526-143286575	4qE1	PREDICTED: Mus musculus predicted gene, OTTMUSG00000010333 (OTTMUSG00000010333), misc RNA.					
Mus musculus	RefSeq	ILMN_216879	ILMN_216879	EID3	NM_025499.2	NM_025499.2		66341	125988413	NM_025499.2	Eid3	NP_079775.2	ILMN_1254327	002370162	S	907	CAAAAGTACCCCGATACTCCAGTGTCATACTTTGAGTTTGTGATTGATCC	10	+	82330277-82330326	10qC1	Mus musculus EP300 interacting inhibitor of differentiation 3 (Eid3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MGC118226; 1700027M21Rik	MGC118226; 1700027M21Rik
Mus musculus	MEEBO	ILMN_185777	ILMN_185777	4930589L23RIK	scl075879.1_3						4930589L23Rik		ILMN_1245388	005670692	S	1	GTGCTGTGGTGCAAGACGTTAAAGAACCTGCGGTTATGAAGAGTCTGACC										
Mus musculus	RefSeq	ILMN_198952	ILMN_198952	LOC270186	XM_194481.2	XM_194481.2			38090035	XM_194481.2	LOC270186		ILMN_1213808	004120347	S	176	CTGAACTTCTGATCCGCAAGCTCCCCCAGGACTTCAAAACAGATCTGCGC										
Mus musculus	RefSeq	ILMN_215893	ILMN_250222	POLR2H	NM_145632.2	NM_145632.2		245841	133892587	NM_145632.2	Polr2h	NP_663607.1	ILMN_2772936	000110639	S	371	TGTATGGGAAAGTGTACAGGATCGAAGGGGATGAGACCTCCACTGAAGCA	16	+	20720615-20720664	16qB1	Mus musculus polymerase (RNA) II (DNA directed) polypeptide H (Polr2h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	MGC8248; MGC103049	MGC8248; MGC103049
Mus musculus	Riken	ILMN_203935	ILMN_203935	4931428F02RIK	ri|A130095I06|PX00125F13|AK038320|3641					AK038320	4931428F02Rik		ILMN_1228523	005090347	S	3138	CCCAGGGTTGGGCCTCAGAATCACCAGACTTAGACTGGGCCTTTTTGGAA										
Mus musculus	RefSeq	ILMN_200294	ILMN_200294	LOC386156	XM_359097.1	XM_359097.1			38081244	XM_359097.1	LOC386156		ILMN_1237888	000870176	S	217	CAGTCAGCCACCACAACACCCAGCAACCTGGACCAGATGGAACCTCTTTG										
Mus musculus	RefSeq	ILMN_224143	ILMN_236724	LOC677551	XR_005084.2	XR_005084.2		677551	149274522	XR_005084.2	LOC677551		ILMN_1226762	004290202	S	631	CTCGTGTCTGTACATAGCGGCCTGGCTGTGGCCTCATGTGGATCAGTCTT					PREDICTED: Mus musculus similar to Ribosomal protein L19 (LOC677551), misc RNA.					
Mus musculus	RefSeq	ILMN_218166	ILMN_218166	RANBP2	NM_011240.3	NM_011240.3		19386	153792533	NM_011240.3	Ranbp2	NP_035370.2	ILMN_2692496	002630750	S	9162	GACTTTAAGCATGTAGTATTTGGGTTTGTTAAGGATGGCATGGATACTGT				10qB4	Mus musculus RAN binding protein 2 (Ranbp2), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	NUP358; AI256741; A430087B05Rik	NUP358; AI256741; A430087B05Rik
Mus musculus	RefSeq	ILMN_224083	ILMN_239129	COQ9	NM_026452.2	NM_026452.2		67914	118129840	NM_026452.2	Coq9	NP_080728.1	ILMN_2774456	007400014	S	1095	TTGCTGCCGTTCTGACCTGGGACTGGGCCACTTCTTCAGTTCCTAATGCC	8	+	97378197-97378246	8qC5-qD1	Mus musculus coenzyme Q9 homolog (yeast) (Coq9), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]		2310005O14Rik; C78387	2310005O14Rik; C78387
Mus musculus	Riken	ILMN_202444	ILMN_202444	4930438M06RIK	ri|4930438M06|PX00031C18|AK015338|3004					AK015338	4930438M06Rik		ILMN_2549653	007550129	S	2883	AAGAGCTGCTAGCCAAAGTATTCACCGCCCTGCCGGCCAAGAAGGAACCC										
Mus musculus	RefSeq	ILMN_197844	ILMN_317989	LOC100045737	XR_031944.1	XR_031944.1		100045737	149252947	XR_031944.1	LOC100045737		ILMN_1213547	002630735	S	807	AAAGCTGTCCCCAAGACGACGCCAACTCGCCTGTATCTGGACTACCTGCC					PREDICTED: Mus musculus hypothetical protein LOC100045737 (LOC100045737), misc RNA.					
Mus musculus	RefSeq	ILMN_220679	ILMN_317989	LOC100045737	XR_031944.1	XR_031944.1		100045737	149252947	XR_031944.1	LOC100045737		ILMN_2725227	002810044	S	2973	CCATGCTGGATACTATGTGTCTGCTACTGGATGGCAAAGCCTCACTGCCT					PREDICTED: Mus musculus hypothetical protein LOC100045737 (LOC100045737), misc RNA.					
Mus musculus	RefSeq	ILMN_192568	ILMN_225588	LOC207685	XM_992387.1	XM_992387.1		207685	94401045	XM_992387.1	LOC207685	XP_997481.1	ILMN_2489305	006250753	S	147	GGGAGCCTCAGCAAAACTCACGTGCACCTTGAGTAGTCAGCACAGTACGT					PREDICTED: Mus musculus hypothetical protein LOC207685, transcript variant 3 (LOC207685), mRNA.					
Mus musculus	RefSeq	ILMN_196028	ILMN_225588	LOC207685	XM_992387.1	XM_992387.1		207685	94401045	XM_992387.1	LOC207685	XP_997481.1	ILMN_2520956	005420128	S	348	CATCCAGCCTGAAGATGAAGCAATATACATCTGTGGTGTGGGTGATACAA					PREDICTED: Mus musculus hypothetical protein LOC207685, transcript variant 3 (LOC207685), mRNA.					
Mus musculus	MEEBO	ILMN_209819	ILMN_209819	ANKMY2	scl00217473.2_274	NM_178910.1			46849725	NM_178910.1	Ankmy2		ILMN_2599514	006580372	S	1386	AGGCTGGCCGTGATTCCTGATAACAATCTCAAAGTGTGTCCCTGCTGCTT								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219370	ILMN_219370	FAM20B	NM_145413.4	NM_145413.4		215015	141802861	NM_145413.4	Fam20b	NP_663388.1	ILMN_1247603	007570671	S	1660	GGAAGTGTTTCCAGAGTGTGCGTCTCGGGTGACCCTTGCTGTCTTTTCTC	1	-	158611230-158611279	1qH1	Mus musculus family with sequence similarity 20, member B (Fam20b), mRNA.				mKIAA0475; FAM20B	mKIAA0475; FAM20B
Mus musculus	Riken	ILMN_203842	ILMN_203842	A330037I16RIK	ri|A330037I16|PX00131N08|AK039388|1907					AK039388	A330037I16Rik		ILMN_1248609	004540088	S	1841	GATTTTTCTCCTTTTGGATAAACTAGCAAAAGACCTGACTGCTGCCAGCC										
Mus musculus	RefSeq	ILMN_214276	ILMN_214276	INPP4A	NM_030266.2	NM_030266.2		269180	126116586	NM_030266.2	Inpp4a	NP_084542.2	ILMN_2752808	002690563	S	3084	GGTTGTCGGCGAGAAAACACAATGAAGAATGTTGGAAGTCGCAAATATGC	1	+	37464976-37465025	1qB	Mus musculus inositol polyphosphate-4-phosphatase, type I (Inpp4a), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a polyphosphate, the anion or salt of polyphosphoric acid [goid 6798] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 34597] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 3,4-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 16316] [evidence TAS]	D130048C09Rik; 9630012D15; 107kDa	D130048C09Rik; 9630012D15; 107kDa
Mus musculus	RefSeq	ILMN_214276	ILMN_214276	INPP4A	NM_030266.2	NM_030266.2		269180	126116586	NM_030266.2	Inpp4a	NP_084542.2	ILMN_2773879	004890193	S	1074	GCCATCTGCCGCATGTACCGCTTCCCAACTACTGATGGTAACCACCTACG	1	+	37425133-37425182	1qB	Mus musculus inositol polyphosphate-4-phosphatase, type I (Inpp4a), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a polyphosphate, the anion or salt of polyphosphoric acid [goid 6798] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 34597] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 3,4-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 16316] [evidence TAS]	D130048C09Rik; 9630012D15; 107kDa	D130048C09Rik; 9630012D15; 107kDa
Mus musculus	Riken	ILMN_205155	ILMN_205155	A630021K08RIK	ri|A630021K08|PX00144L04|AK041571|3030					AK041571	A630021K08Rik		ILMN_2570403	001410291	S	2672	AGATAAGGCAGAGGGCAGAGGATGTGGCTCAGTGGGTACAAGACGTGGCC										
Mus musculus	RefSeq	ILMN_228938	ILMN_228938	ZFX	NM_001044386.1	NM_001044386.1		22764	113205066	NM_001044386.1	Zfx	NP_001037851.1	ILMN_3024592	004200270	I	347	ATAACTGTGCCCAGCTAACCTTGTAAGATGAATTGGGGAGCATCCCCTCT	X	-	91359546-91359595	XqC3	Mus musculus zinc finger protein X-linked (Zfx), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism [goid 16265] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 48599] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfx5; 6; Zfx6	Zfx5; 6; Zfx6
Mus musculus	RefSeq	ILMN_193387	ILMN_228938	ZFX	NM_001044386.1	NM_001044386.1		22764	113205066	NM_001044386.1	Zfx	NP_001037851.1	ILMN_2496682	004670138	S	6670	CCCTCCTACTCTTACATAGCCCCCAGTGTTGCATTCCTCAAACGTAGGAA	X	-	91320252-91320301	XqC3	Mus musculus zinc finger protein X-linked (Zfx), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism [goid 16265] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 48599] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfx5; 6; Zfx6	Zfx5; 6; Zfx6
Mus musculus	RefSeq	ILMN_196921	ILMN_254127	EG627998	XM_907199.3	XM_907199.3		627998	149233992	XM_907199.3	EG627998	XP_912292.1	ILMN_1230751	001300494	S	64	CAAGCTCATCCGTAACTTCGCAGAGACGGCACCATCGATGGTGGCTGCTG				1qC1.2	PREDICTED: Mus musculus predicted gene, EG627998 (EG627998), mRNA.					
Mus musculus	RefSeq	ILMN_220580	ILMN_232668	4933405L10RIK	XM_913640.3	XM_913640.3		71046	149259308	XM_913640.3	4933405L10Rik	XP_918733.2	ILMN_1233006	000830494	S	965	GCCTCAAGGCTGAGGTGGATAAGACGACGCAAGTGGATATCGACAAGATG				8qD3	PREDICTED: Mus musculus RIKEN cDNA 4933405L10 gene (4933405L10Rik), mRNA.					
Mus musculus	MEEBO	ILMN_184547	ILMN_184547	1810048J11RIK	scl43116.11.1_178				34328289	NM_026327	1810048J11Rik		ILMN_2718627	005900626	S	1676	GCTAAGGGTCGGGGAGTAGGTGCTGCCGTCCTTTAAAACACGAATTTATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215532	ILMN_215532	IGSF11	NM_170599.2	NM_170599.2		207683	40254204	NM_170599.2	Igsf11	NP_733548.2	ILMN_2965399	004640209	S	3150	GGGACACTCGGGAAGTCACTGCTGTGACCGTTTCGATGTTGATAAGAAGG	16	+	39027008-39027057	16qB4	Mus musculus immunoglobulin superfamily, member 11 (Igsf11), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Igsf13; BT-IgSF; 1700025L02Rik	Igsf13; BT-IgSF; 1700025L02Rik
Mus musculus	RefSeq	ILMN_215532	ILMN_215532	IGSF11	NM_170599.2	NM_170599.2		207683	40254204	NM_170599.2	Igsf11	NP_733548.2	ILMN_1237582	001660296	S	1266	CTCTGGTAGTTACAGCCAACAGAGGGTCATCACCTCAGGTCTTGCCCAGG	16	+	39025124-39025173	16qB4	Mus musculus immunoglobulin superfamily, member 11 (Igsf11), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Igsf13; BT-IgSF; 1700025L02Rik	Igsf13; BT-IgSF; 1700025L02Rik
Mus musculus	RefSeq	ILMN_215532	ILMN_215532	IGSF11	NM_170599.2	NM_170599.2		207683	40254204	NM_170599.2	Igsf11	NP_733548.2	ILMN_1248796	006420332	S	3154	CACTCGGGAAGTCACTGCTGTGACCGTTTCGATGTTGATAAGAAGGTGAA	16	+	39027012-39027061	16qB4	Mus musculus immunoglobulin superfamily, member 11 (Igsf11), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Igsf13; BT-IgSF; 1700025L02Rik	Igsf13; BT-IgSF; 1700025L02Rik
Mus musculus	RefSeq	ILMN_187035	ILMN_187035	TRAF5	NM_011633.1	NM_011633.1		22033	6755866	NM_011633.1	Traf5	NP_035763.1	ILMN_2440604	003460075	S	2128	CTTGGATCCTTCCCTGGTTTGAAACTTTAAACTCTTGAAATATTGCTGTT				1qH6	Mus musculus Tnf receptor-associated factor 5 (Traf5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IMP]		
Mus musculus	RefSeq	ILMN_187035	ILMN_187035	TRAF5	NM_011633.1	NM_011633.1		22033	6755866	NM_011633.1	Traf5	NP_035763.1	ILMN_3046362	006020161	I	1042	GCATGAGCGGGCAGCCCTGCAGGACCACATGCTTCTGGTTTTAGAGAAGA	1	-	193878242-193878291	1qH6	Mus musculus Tnf receptor-associated factor 5 (Traf5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IMP]		
Mus musculus	RefSeq	ILMN_193575	ILMN_209133	GNA11	NM_010301.3	NM_010301.3		14672	142384965	NM_010301.3	Gna11	NP_034431.1	ILMN_1254131	006250201	S	3050	TTAATCCTCGTCCTTTGTGAAGCATGTTCCCGTGTGAGGGGGAGGCTCAG	10	-	80991639-80991688	10qC1	Mus musculus guanine nucleotide binding protein, alpha 11 (Gna11), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that modulates the frequency, rate or extent of melanocyte differentiation [goid 45634] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]	Dsk7; E430025L19	Dsk7; E430025L19
Mus musculus	MEEBO	ILMN_190318	ILMN_190318	1600032L17RIK	scl44908.4.1218_106				51767620	XM_127272	1600032L17Rik		ILMN_1238021	001580441	S	1	GTCAGCTTGTCCTTTTAACTGGGCTCTGGAAACACCTCCCCAGATTCGAT										
Mus musculus	MEEBO	ILMN_190318	ILMN_190318	1600032L17RIK	scl44908.4.1218_106				51767620	XM_127272	1600032L17Rik		ILMN_2524058	000520273	S	769	CAGCCCAAAGAAGGGGAGGATGCTGGCGCGTGGGGAGTCGCTATTCATTT										
Mus musculus	RefSeq	ILMN_199959	ILMN_250541	4933402J24RIK	XM_622899.3	XM_622899.3		74438	94371618	XM_622899.3	4933402J24Rik	XP_622899.2	ILMN_2537089	002190008	S	3476	TTCCTGCTGCTCCATACCTCGAGAGTTTAGGGCCCTGGCATGTGATGCTG				4qA1	PREDICTED: Mus musculus RIKEN cDNA 4933402J24 gene, transcript variant 3 (4933402J24Rik), mRNA.					
Mus musculus	Riken	ILMN_202318	ILMN_202318	4930427E19RIK	ri|4930427E19|PX00030H03|AK015210|2260					AK015210	4930427E19Rik		ILMN_1238897	007650050	S	1994	TGGGGAATTGAGTCACAAAGGTCACATTCTCAAGCCTGGGTCTAAAGGCC										
Mus musculus	MEEBO	ILMN_193298	ILMN_193298	IGKV1-88_AJ231206_IG_KAPPA_VARIABLE_1-88_289	IGKV1-88_AJ231206_Ig_kappa_variable_1-88_289						IGKV1-88_AJ231206_Ig_kappa_variable_1-88_289		ILMN_2495896	005870008	S	20	AAAGCCTGAGGACTTGGGAATGTATTACTGCTTACAAGGTACACATCAGC										
Mus musculus	RefSeq	ILMN_209977	ILMN_209977	CNOT10	NM_153585.4	NM_153585.4		78893	142387942	NM_153585.4	Cnot10	NP_705813.2	ILMN_2601020	005810035	S	2319	CCCATCCAGCCCATCCAAATGCCAGCGTTCACCACCGTGCAGAGGAAGTG	9	-	114500656-114500705	9qF3	Mus musculus CCR4-NOT transcription complex, subunit 10 (Cnot10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC37693; 2600001P13Rik	MGC37693; 2600001P13Rik
Mus musculus	RefSeq	ILMN_208705	ILMN_208705	4932438H23RIK	NM_028905.2	NM_028905.2		74387	141802533	NM_028905.2	4932438H23Rik	NP_083181.1	ILMN_1245519	006370348	S	2149	CCAAGAGAGGGGTGCACGAATGAAGACATTTGCCCAGACTGTTAGCCTCA	16	-	91054665-91054714	16qC3.3	Mus musculus RIKEN cDNA 4932438H23 gene (4932438H23Rik), mRNA.				AI550392; 4931406G06Rik	AI550392; 4931406G06Rik
Mus musculus	RefSeq	ILMN_220420	ILMN_220420	TMEM215	NM_177175.3	NM_177175.3		320500	141801914	NM_177175.3	Tmem215	NP_796149.1	ILMN_1231792	004040706	S	3016	CCTCCAGCATTTCTGGGAGGCATGTACTAGGAATTACTGTATCCCTTTTA	4	+	40422484-40422533	4qA5	Mus musculus transmembrane protein 215 (Tmem215), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_218670	ILMN_218670	BET1	NM_009748.2	NM_009748.2		12068	31542222	NM_009748.2	Bet1	NP_033878.1	ILMN_2833495	002510307	S	824	CAGAGAAGCTGGGTCAGCCTTTGGGGGAGGTTGCATGATGGGAGAGAGCT	6	-	4027496-4027545	6qA1	Mus musculus blocked early in transport 1 homolog (S. cerevisiae) (Bet1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW555236; Bet-1	AW555236; Bet-1
Mus musculus	RefSeq	ILMN_195764	ILMN_227881	PLA2G12A	NM_023196.2	NM_023196.2		66350	24475672	NM_023196.2	Pla2g12a	NP_075685.1	ILMN_2636536	001510091	S	1413	GCGCTATCTGCTGCTGAGGTTGTGGTTACTCCCTCATCCCCGTTTTCCAT	3	+	129598622-129598671	3qG3	Mus musculus phospholipase A2, group XIIA (Pla2g12a), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IDA]	Pla2g12; mGXII-1-PLA2; GXII; 2310004B05Rik; MGC58884; mGXII-1; Rossy	Pla2g12; mGXII-1-PLA2; GXII; 2310004B05Rik; MGC58884; mGXII-1; Rossy
Mus musculus	RefSeq	ILMN_191490	ILMN_191490	ZHX1	NM_009572.3	NM_009572.3		22770	109627661	NM_009572.3	Zhx1	NP_033598.2	ILMN_2479530	005570484	S	3467	GTCAAACTGCTGCAGTCGGGGGAAGTTCCGCAATGTATATAGAGCGCTAA	15	-	57880127-57880176	15qD1	Mus musculus zinc fingers and homeoboxes 1 (Zhx1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA4149; KIAA4149	mKIAA4149; KIAA4149
Mus musculus	RefSeq	ILMN_205503	ILMN_191490	ZHX1	NM_009572.3	NM_009572.3		22770	109627661	NM_009572.3	Zhx1	NP_033598.2	ILMN_1217552	001300292	S	311	CTGAGGCGAGGCGGCCCCTGCAGAAGACTGCTAGCTACTTTGGGACAATT	15	-	57900957-57900984:57907712-57907733	15qD1	Mus musculus zinc fingers and homeoboxes 1 (Zhx1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA4149; KIAA4149	mKIAA4149; KIAA4149
Mus musculus	RefSeq	ILMN_191490	ILMN_191490	ZHX1	NM_009572.3	NM_009572.3		22770	109627661	NM_009572.3	Zhx1	NP_033598.2	ILMN_2510714	006250131	S	4946	TCCATCTCACTGGTAGGCTGGATGAAAGTCTGCTCTGATGTTTGCTAGCT	15	-	57878648-57878697	15qD1	Mus musculus zinc fingers and homeoboxes 1 (Zhx1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA4149; KIAA4149	mKIAA4149; KIAA4149
Mus musculus	RefSeq	ILMN_191490	ILMN_191490	ZHX1	NM_009572.3	NM_009572.3		22770	109627661	NM_009572.3	Zhx1	NP_033598.2	ILMN_3107322	001190192	A	4207	GGGGCTTTTTAACGGTAAGTATGTCGCAGCAGAAGACAGAGTTCCTACTG	15	-	57879387-57879436	15qD1	Mus musculus zinc fingers and homeoboxes 1 (Zhx1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA4149; KIAA4149	mKIAA4149; KIAA4149
Mus musculus	RefSeq	ILMN_198735	ILMN_198735	LOC209423	XM_146092.3	XM_146092.3			38087175	XM_146092.3	LOC209423		ILMN_1235338	006770091	S	983	AGTGGCTATGCGGATGCATCATGTTCAAGCTGGATGCAAGGCCTGCAGAG										
Mus musculus	RefSeq	ILMN_201392	ILMN_201392	LOC385084	XM_358042.1	XM_358042.1			38093460	XM_358042.1	LOC385084		ILMN_1214745	004810209	S	3	GGTCAAGGTGTCAAAAGTTTCAGTCAAGGCTTCCAAACCAAGGGAGTGGG										
Mus musculus	MEEBO	ILMN_194900	ILMN_194900	2810403D23RIK	scl069965.1_270						2810403D23Rik		ILMN_2510678	004900129	S	11	AAACACCTTAAAAGTTAAATGATAGATTGTTATGTTGTACAAAAAGGTTA										
Mus musculus	RefSeq	ILMN_213418	ILMN_213418	PTP4A3	NM_008975.2	NM_008975.2		19245	31543526	NM_008975.2	Ptp4a3	NP_033001.2	ILMN_2655260	003140328	S	1198	TCGCCCTCATCGAGAGCGGGATGAAGTACGAGGACGCCATCCAGTTCATC	15	+	73586478-73586527	15qD3	Mus musculus protein tyrosine phosphatase 4a3 (Ptp4a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	AV088979; Prl-3; pPtp4a3; Ptp4a3	AV088979; Prl-3; pPtp4a3; Ptp4a3
Mus musculus	RefSeq	ILMN_213418	ILMN_213418	PTP4A3	NM_008975.2	NM_008975.2		19245	31543526	NM_008975.2	Ptp4a3	NP_033001.2	ILMN_1226848	006650193	S	2734	ACTCAGTAATGGTGACCTTGTGTGGGCTGGAAACTCACTACCCCGGTGCC	15	+	73588708-73588757	15qD3	Mus musculus protein tyrosine phosphatase 4a3 (Ptp4a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	AV088979; Prl-3; pPtp4a3; Ptp4a3	AV088979; Prl-3; pPtp4a3; Ptp4a3
Mus musculus	RefSeq	ILMN_209616	ILMN_209616	CHRNA1	NM_007389.4	NM_007389.4		11435	145966790	NM_007389.4	Chrna1	NP_031415.2	ILMN_1239269	004210128	S	4171	GCATTTTGTCAGTTGATCTAATTCTTTAGCTTTTTCTACTCACGACCACT				2qC3	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle) (Chrna1), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence ISO]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IPI]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence ISO]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence ISO]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IGI]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [evidence IGI]	Acra; AI608266; AI385656; Achr-1	Acra; AI608266; AI385656; Achr-1
Mus musculus	RefSeq	ILMN_209616	ILMN_209616	CHRNA1	NM_007389.4	NM_007389.4		11435	145966790	NM_007389.4	Chrna1	NP_031415.2	ILMN_1245221	003840201	S	1503	GTGTTCTACATGTCCTACATGTTAATGAGAGTGATCTCTGCTCACACGGC				2qC3	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle) (Chrna1), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence ISO]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IPI]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence ISO]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence ISO]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IGI]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [evidence IGI]	Acra; AI608266; AI385656; Achr-1	Acra; AI608266; AI385656; Achr-1
Mus musculus	RefSeq	ILMN_246147	ILMN_246147	E130308A19RIK	NM_001015681.1	NM_001015681.1		230259	62821810	NM_001015681.1	E130308A19Rik	NP_001015681.1	ILMN_3060538	004010184	I	3244	GCCCTGGGAATCCTGTAGGCTGGCACTATGTTAGGGACACTGATTCAGGC	4	+	59766815-59766864	4qB3	Mus musculus RIKEN cDNA E130308A19 gene (E130308A19Rik), transcript variant 2, mRNA.				MGC47072	MGC47072
Mus musculus	RefSeq	ILMN_199869	ILMN_246147	E130308A19RIK	NM_001015681.1	NM_001015681.1		230259	62821810	NM_001015681.1	E130308A19Rik	NP_001015681.1	ILMN_2536776	003360370	S	1990	GTCAAGCGGGAGAGCCGGAGTGGTTCGACCAGAGTGTGCCATGGGAAAAT	4	+	59765561-59765610	4qB3	Mus musculus RIKEN cDNA E130308A19 gene (E130308A19Rik), transcript variant 2, mRNA.				MGC47072	MGC47072
Mus musculus	RefSeq	ILMN_205608	ILMN_246147	E130308A19RIK	NM_001015681.1	NM_001015681.1		230259	62821810	NM_001015681.1	E130308A19Rik	NP_001015681.1	ILMN_1250338	004900435	S	2398	CAGCTGGTCTCCGTTACTACAGCCGGCCATTCCTCAGACTTGAGATTCAC	4	+	59765969-59766018	4qB3	Mus musculus RIKEN cDNA E130308A19 gene (E130308A19Rik), transcript variant 2, mRNA.				MGC47072	MGC47072
Mus musculus	RefSeq	ILMN_246147	ILMN_246147	E130308A19RIK	NM_001015681.1	NM_001015681.1		230259	62821810	NM_001015681.1	E130308A19Rik	NP_001015681.1	ILMN_3137956	001440767	A	1283	CTGAAGTGAGCTCCAGTCAACAGCAGCCCCCTGCTGCTCCAACCATAACC	4	+	59704133-59704182	4qB3	Mus musculus RIKEN cDNA E130308A19 gene (E130308A19Rik), transcript variant 2, mRNA.				MGC47072	MGC47072
Mus musculus	RefSeq	ILMN_215430	ILMN_215430	2810048G17RIK	NM_133746.3	NM_133746.3		72691	141801704	NM_133746.3	2810048G17Rik	NP_598507.2	ILMN_2677612	004040133	S	1979	CTGATTGTATATCTCTGGCCAGATTTTATATATTTAAACTTTTTGATAAA	19	-	47206742-47206791	19qC3	Mus musculus RIKEN cDNA 2810048G17 gene (2810048G17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211167	ILMN_211167	BC038613	NM_153784.1	NM_153784.1		212733	24418886	NM_153784.1	BC038613	NP_722479.1	ILMN_2849305	004670477	S	1583	GAAGGACCTGAGGGTTGGGGGCCAGGGCTACCTTTTCTCACTCTGGAGCT	17	+	23395877-23395886:23395887-23395926	17qA3.3	Mus musculus cDNA sequence BC038613 (BC038613), mRNA.				MGC47347	MGC47347
Mus musculus	RefSeq	ILMN_198809	ILMN_230595	NLRP12	XM_904112.3	XM_904112.3		378425	149256744	XM_904112.3	Nlrp12	XP_909205.3	ILMN_1253264	000450646	S	2744	CTCCAACCTGATCGAGCTGGCCTTATACCGAAATGCCTTGGGCAGCCAGG				7qA1	PREDICTED: Mus musculus NLR family, pyrin domain containing 12, transcript variant 2 (Nlrp12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I [goid 45345] [evidence ISO]; Any process that modulates an I-kappaB kinase/NF-kappaB induced cascade [goid 43122] [evidence ISO]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence ISO]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_253414	ILMN_253414	VMO1	NM_001013607.1	NM_001013607.1		327956	61888887	NM_001013607.1	Vmo1	NP_001013625.1	ILMN_2936105	001770386	S	602	ATTCTGCTGTGCCAGCTGATGCGGTCGCTCTGCCAGTACTGTCTTTTACC	11	-	70327038-70327069:70327070-70327087	11qB3	Mus musculus vitelline membrane outer layer 1 homolog (chicken) (Vmo1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Construction of the vitelline membrane portion of the egg shell, a rigid structure required to maintain the shape of the egg [goid 30704] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the vitelline membrane of an egg [goid 8316] [evidence IEA]	RP23-122P1.11; Gm741	RP23-122P1.11; Gm741
Mus musculus	Riken	ILMN_207095	ILMN_207095	GRB14	ri|E330016G05|PX00211D03|AK087758|2550					AK087758	Grb14		ILMN_1241015	001510598	S	2147	GTCTGCTGATCTTGGCAAACACAGCCACCTGGGTTCATAAAGGGGCCATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IPI]		
Mus musculus	Riken	ILMN_204227	ILMN_204227	A730071D19RIK	ri|A730071D19|PX00151J03|AK043212|2187					AK043212	A730071D19Rik		ILMN_2563357	006560411	S	1815	CCCAGAGTCAACACTGGTAGCAATGGCTGCATGGGACCCAGGATCGGATC										
Mus musculus	RefSeq	ILMN_210666	ILMN_210666	AQP7	NM_007473.4	NM_007473.4		11832	145301575	NM_007473.4	Aqp7	NP_031499.1	ILMN_2607964	001260747	S	2011	TTATATAACTAAGTTTAGCCATGAACTCTGGATTGTCTGGCCTCCACCTC				4qA5	Mus musculus aquaporin 7 (Aqp7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]	AQP 7; AQP7L; AQPap	AQP 7; AQP7L; AQPap
Mus musculus	RefSeq	ILMN_210666	ILMN_210666	AQP7	NM_007473.4	NM_007473.4		11832	145301575	NM_007473.4	Aqp7	NP_031499.1	ILMN_1223330	006370487	S	1331	TGTGCCTCTAGAGCACTTCTAAGTAGAGCTTCTCTTTGACCACAACCGTA				4qA5	Mus musculus aquaporin 7 (Aqp7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]	AQP 7; AQP7L; AQPap	AQP 7; AQP7L; AQPap
Mus musculus	RefSeq	ILMN_210666	ILMN_210666	AQP7	NM_007473.4	NM_007473.4		11832	145301575	NM_007473.4	Aqp7	NP_031499.1	ILMN_1254953	006100703	S	1324	GTGGCTCTGTGCCTCTAGAGCACTTCTAAGTAGAGCTTCTCTTTGACCAC				4qA5	Mus musculus aquaporin 7 (Aqp7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]	AQP 7; AQP7L; AQPap	AQP 7; AQP7L; AQPap
Mus musculus	RefSeq	ILMN_216443	ILMN_216443	TAS2R108	NM_020502.1	NM_020502.1		57253	10048427	NM_020502.1	Tas2r108	NP_065248.1	ILMN_1237914	001770630	S	504	CCTCAGTGATGGTATCTTGACGTTAGTAGCCTCTTTGGTCCTGAACTCAC	6	+	40444094-40444143	6qB1	Mus musculus taste receptor, type 2, member 108 (Tas2r108), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence ISA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence TAS]	Tas2r8; T2R108; mGR08; T2r8; mt2r8	Tas2r8; T2R108; mGR08; T2r8; mt2r8
Mus musculus	RefSeq	ILMN_200211	ILMN_200211	LOC385952	XM_359010.1	XM_359010.1			38080953	XM_359010.1	LOC385952		ILMN_1237070	006220112	S	458	GGGGAGTGGGGAAAGGAGCAGGCCTCCAAGAGACTACAACCAAGCACAAC										
Mus musculus	RefSeq	ILMN_197665	ILMN_327389	EG668225	XM_001479184.1	XM_001479184.1		668225	149267141	XM_001479184.1	EG668225	XP_001479234.1	ILMN_1218674	005260554	S	1826	TCTCCTACAAAGATGTGGAGGCTGCTCTAGCCAAGGTGGGCTCTCGGGCT				15qF2	PREDICTED: Mus musculus predicted gene, EG668225 (EG668225), mRNA.					
Mus musculus	MEEBO	ILMN_190047	ILMN_190047	NCOA1	scl42663.20_2				6754799	NM_010881	Ncoa1		ILMN_1257974	000380091	S	18	GCATTCAGACAAAAGAAACAGGGATGACATACAGCTCAGTCGCAGGACAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_224245	ILMN_314264	LOC100048307	XM_001479993.1	XM_001479993.1		100048307	149259662	XM_001479993.1	LOC100048307	XP_001480043.1	ILMN_1234306	000610348	S	2485	TGTTTTTGTATAAGAATAATAAAGAAATTTGGGGTAAGTGTTCGTATTAT					PREDICTED: Mus musculus similar to Solute carrier family 35, member F2 (LOC100048307), mRNA.					
Mus musculus	Riken	ILMN_204842	ILMN_204842	IL2RG	ri|A130027N13|PX00122E03|AK037584|1336					AK037584	Il2rg		ILMN_2568028	001850402	S	1035	TGGCGTTGTGGATGCAGTGGCTAAGGCCAAGCAAGAGAAGAAATGGTTCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of T cell differentiation in the thymus [goid 33089] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells [goid 32831] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with interleukin-2 [goid 19976] [evidence IPI]		
Mus musculus	Riken	ILMN_207273	ILMN_207273	G630056H24RIK	ri|G630056H24|PL00013F12|AK090343|2379					AK090343	G630056H24Rik		ILMN_1217836	001570437	S	1942	GCCCCTCCCACAGATGTCCGTAGATTTGTCACCAGAGTCTTACGCTGATG										
Mus musculus	RefSeq	ILMN_222741	ILMN_324152	C130039O16RIK	XM_001477247.1	XM_001477247.1		238317	149263333	XM_001477247.1	C130039O16Rik	XP_001477297.1	ILMN_2754119	006380047	S	3281	ATTCTCCGGAGCCATGAGCCCAACGCCCCGGGGTCTGCAGGTATCCAGAC	12	-	85493916-85493965	12qD1	PREDICTED: Mus musculus RIKEN cDNA C130039O16 gene (C130039O16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219791	ILMN_219791	SLC23A3	NM_194333.3	NM_194333.3		22626	124244078	NM_194333.3	Slc23a3	NP_919314.2	ILMN_1218441	006840494	S	1980	GCCTTTCCTCCTCTTAAGACTTGAGCAGAGGCCATGGTTTAGCGGGTTGG	1	-	75122144-75122193	1qC3	Mus musculus solute carrier family 23 (nucleobase transporters), member 3 (Slc23a3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC143682; SVCT3; Yspl1; MGC143681	MGC143682; SVCT3; Yspl1; MGC143681
Mus musculus	Riken	ILMN_207207	ILMN_207207	GJA7	ri|C130009G16|PX00666C23|AK081351|3412					AK081351	Gja7		ILMN_1253346	004150450	S	2692	CTTGTCACTTGTCTGGGGAGGAGAGAAGAGGGTATTCACAGTCAACCCTG										
Mus musculus	RefSeq	ILMN_212758	ILMN_212758	CSNK1G2	NM_134002.1	NM_134002.1		103236	19527223	NM_134002.1	Csnk1g2	NP_598763.1	ILMN_2718251	006840291	S	2211	GGCCAGGCCTTGGTCGTGGGAACTGAGTTCTTGCTTTACGACGTGTACAG	10	+	80103349-80103398	10qC1	Mus musculus casein kinase 1, gamma 2 (Csnk1g2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2810429I12Rik; AI463719	2810429I12Rik; AI463719
Mus musculus	RefSeq	ILMN_212758	ILMN_212758	CSNK1G2	NM_134002.1	NM_134002.1		103236	19527223	NM_134002.1	Csnk1g2	NP_598763.1	ILMN_2875159	006480168	S	1909	GCGCCCCTGTTAGCTCATAAAGTCCAGCTTGTCCCCTCAATCCAAAGGCC	10	+	80103047-80103096	10qC1	Mus musculus casein kinase 1, gamma 2 (Csnk1g2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2810429I12Rik; AI463719	2810429I12Rik; AI463719
Mus musculus	RefSeq	ILMN_212758	ILMN_212758	CSNK1G2	NM_134002.1	NM_134002.1		103236	19527223	NM_134002.1	Csnk1g2	NP_598763.1	ILMN_2875163	007330343	S	2079	TCACCGCATAGGGACTGGTATGGGCCCCACAGTACCAGGGCGGCCGTGAT	10	+	80103217-80103266	10qC1	Mus musculus casein kinase 1, gamma 2 (Csnk1g2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2810429I12Rik; AI463719	2810429I12Rik; AI463719
Mus musculus	RefSeq	ILMN_221738	ILMN_326566	4933400A11RIK	NR_003635.1	NR_003635.1		66747	153792675	NR_003635.1	4933400A11Rik		ILMN_1250324	003710240	S	1016	CATGTACAACATTCAAAGCCTTGCGCAGACAGCTTCCAATTACCTACCAC				XqF5	Mus musculus RIKEN cDNA 4933400A11 gene (4933400A11Rik), non-coding RNA.				MGC130179; MGC130180	MGC130179; MGC130180
Mus musculus	RefSeq	ILMN_198888	ILMN_198888	LOC330870	XM_204303.3	XM_204303.3			38089421	XM_204303.3	LOC330870		ILMN_1241361	007380458	S	1056	AGGTCACATGTCAGTAGAGGTTCTACGGGAAGAAGCATGTGACTGTTTCG										
Mus musculus	Riken	ILMN_205863	ILMN_205863	B930004C15RIK	ri|B930004C15|PX00162O04|AK046928|824					AK046928	B930004C15Rik		ILMN_1224455	005570537	S	633	ACAAGCGTGGACCACTCGGTGACCATAAAGAAGGCTGACTGCTTCAGCGC										
Mus musculus	RefSeq	ILMN_192217	ILMN_260402	MRFAP1	NM_026242.2	NM_026242.2		67568	142375273	NM_026242.2	Mrfap1	NP_080518.1	ILMN_2675623	000630176	S	1523	TGCTTGAAAAGATCAGCCCGGAGAGTTACTAAGAAATATTAAGTGAAGTC	5	-	37186113-37186162	5qB3	Mus musculus Morf4 family associated protein 1 (Mrfap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL022827; Pam14; 9130413I22Rik	AL022827; Pam14; 9130413I22Rik
Mus musculus	Riken	ILMN_205895	ILMN_205895	A730081H18RIK	ri|A730081H18|PX00153G15|AK043287|1371					AK043287	A730081H18Rik		ILMN_1245868	001710072	S	1179	CGAGCTGCATCGAGGTTTGGATCAGGTGTTTGGGCGCGTGCTTTGATACA										
Mus musculus	RefSeq	ILMN_189154	ILMN_210306	SFRP1	NM_013834.2	NM_013834.2		20377	65301471	NM_013834.2	Sfrp1	NP_038862.2	ILMN_1231689	001070670	S	3981	CTCTGTTGGACCTTCATAGCCGGACGTGGTTCAAGATGTGCTCCAGAAGC	8	+	24559729-24559778	8qA2	Mus musculus secreted frizzled-related protein 1 (Sfrp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW742929; AW107218; AW011917; sFRP-1; 2210415K03Rik	AW742929; AW107218; AW011917; sFRP-1; 2210415K03Rik
Mus musculus	RefSeq	ILMN_212761	ILMN_230772	HDHD2	NM_001039202.1	NM_001039202.1		76987	85861234	NM_001039202.1	Hdhd2	NP_001034291.1	ILMN_2629982	001990333	S	84	GGCAGCGCGCCGTGCGTTAAAAGCTGTTTTGGTGGATCTCAATGGCACAC	18	+	77189864-77189913	18qE3	Mus musculus haloacid dehalogenase-like hydrolase domain containing 2 (Hdhd2), transcript variant 3, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	3110052N05Rik; 0610039H12Rik	3110052N05Rik; 0610039H12Rik
Mus musculus	RefSeq	ILMN_193548	ILMN_258927	1810009O10RIK	NM_197989.1	NM_197989.1		69109	37574067	NM_197989.1	1810009O10Rik	NP_932106.1	ILMN_2757087	004150639	S	56	CTGCTGGGCCTCATGGAGGCTGTTCGGCCAGACAGCTGCGAAAGCGGGCC	11	-	78565126-78565164:78565165-78565175	11qB5	Mus musculus RIKEN cDNA 1810009O10 gene (1810009O10Rik), mRNA.				RP23-404C20.1	RP23-404C20.1
Mus musculus	RefSeq	ILMN_221433	ILMN_221433	WDSOF1	NM_198606.1	NM_198606.1		223499	38348457	NM_198606.1	Wdsof1	NP_941008.1	ILMN_1236303	004850593	S	1073	GTGTGGGTCTGACGAAATGAACATCCGACTGTGGAAAGCTAATGCGTCTG	15	+	38975241-38975290	15qB3.1	Mus musculus WD repeats and SOF domain containing 1 (Wdsof1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		Gm83; MGC65348	Gm83; MGC65348
Mus musculus	RefSeq	ILMN_211710	ILMN_211710	HECTD2	NM_172637.2	NM_172637.2		226098	142376710	NM_172637.2	Hectd2	NP_766225.1	ILMN_1252222	000840243	S	3652	AGTACCAGCTTATGGCCCATGTGCAAATCATACTTGGCCCGAGGCTCCCC	19	+	36694657-36694706	19qC2	Mus musculus HECT domain containing 2 (Hectd2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4921524L07; AW212605; A630025O09Rik	4921524L07; AW212605; A630025O09Rik
Mus musculus	RefSeq	ILMN_211710	ILMN_211710	HECTD2	NM_172637.2	NM_172637.2		226098	142376710	NM_172637.2	Hectd2	NP_766225.1	ILMN_2737442	002630070	S	4547	CTTTTGTATAAATCTGTATTGTGTTGAGTTTATTTGTGTACATTTTCAAA	19	+	36695552-36695601	19qC2	Mus musculus HECT domain containing 2 (Hectd2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4921524L07; AW212605; A630025O09Rik	4921524L07; AW212605; A630025O09Rik
Mus musculus	MEEBO	ILMN_223866	ILMN_223866	ITIH3	scl45772.22.1_79				6680495	NM_008407	Itih3		ILMN_1231336	006770564	S	2632	CCATACCGACTATATTGTTCCCAGCTTGTTCTGAGTAGCATGTCAGCTGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189789	ILMN_189789	1700008E11RIK	scl069284.1_12						1700008E11Rik		ILMN_2464380	002480133	S	12	ACGTGTGCCCTGGTTTGTAGTAAGCCAGGGAAGGCTCCAGGAGAGCCTCA										
Mus musculus	MEEBO	ILMN_221798	ILMN_221798	LOC380824	IGHV1S19_K00607_Ig_heavy_variable_1S19_210	XM_138369.2			38074037	XM_138369.2	LOC380824		ILMN_1225888	007000722	S	1215	ACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACGGCAGACAC										
Mus musculus	Riken	ILMN_205150	ILMN_205150	SEC8	ri|A130080K06|PX00125A11|AK038125|4230					AK038125	Sec8		ILMN_1259634	000610619	S	3627	GTGTCAGCATAAGCCAGAAACCAGTGAATGCTATCTTGAAGGTGCCAGAG										
Mus musculus	MEEBO	ILMN_193584	ILMN_193584	1700054E11RIK	scl44474.1.718_30						1700054E11Rik		ILMN_2498539	000990440	S	2	CGTCCAGCTTTGTCCAGTAGGCTGCAGTGTCTGCTCAATGCCGGGTGTAA										
Mus musculus	RefSeq	ILMN_234322	ILMN_234322	OLFR301	NM_212436.1	NM_212436.1		257958	47059096	NM_212436.1	Olfr301	NP_997601.1	ILMN_2919904	000670128	S	408	CTGGTTCTGTGTTCAGATGACACTGGCTTCCCTACTTAGCTCACTTGTCC	7	+	93561281-93561330	7qD3	Mus musculus olfactory receptor 301 (Olfr301), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR211-8P; MOR221-4	MOR211-8P; MOR221-4
Mus musculus	RefSeq	ILMN_214805	ILMN_234322	OLFR301	NM_212436.1	NM_212436.1		257958	47059096	NM_212436.1	Olfr301	NP_997601.1	ILMN_2652144	000730768	S	779	CTCCAGTGGTAACATTAGAAGTAGCTAAGGAGATGACTCTTTCTGTATTC	7	+	93561652-93561701	7qD3	Mus musculus olfactory receptor 301 (Olfr301), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR211-8P; MOR221-4	MOR211-8P; MOR221-4
Mus musculus	MEEBO	ILMN_185438	ILMN_185438	PRKAA2	scl24044.9_547				28545636	XM_131633	Prkaa2		ILMN_1227113	005960554	S	12	GGGTATGGTAGGTACTGAGTTTAGAGCAGCCTATCCTCTTGGATCGTGCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence TAS]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of AMP [goid 4679] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188544	ILMN_188544	ZFP606	NM_026112.3	NM_026112.3		67370	118129854	NM_026112.3	Zfp606	NP_080388.2	ILMN_2453565	000580681	S	3274	GTACTGAGTGGGGCATTCACTGTTGATCAAGGTTAACCTCTTTAGAAAAG	7	+	13080203-13080252	7qA1	Mus musculus zinc finger protein 606 (Zfp606), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW494727; 2410022M24Rik	AW494727; 2410022M24Rik
Mus musculus	RefSeq	ILMN_222821	ILMN_222821	SYF2	NM_026780.3	NM_026780.3		68592	146149206	NM_026780.3	Syf2	NP_081056.1	ILMN_1216167	003360132	S	746	CTTAAACCTCGGGAGCAGCGCAGAAGCTGGGAACGGTCGGTCGGAGGCTT				4qD3	Mus musculus SYF2 homolog, RNA splicing factor (S. cerevisiae) (Syf2), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	p29; 1110018L13Rik; RP23-79J18.4; Gcipip; mp29; Cbpin; D4Bwg1551e	p29; 1110018L13Rik; RP23-79J18.4; Gcipip; mp29; Cbpin; D4Bwg1551e
Mus musculus	RefSeq	ILMN_222821	ILMN_222821	SYF2	NM_026780.3	NM_026780.3		68592	146149206	NM_026780.3	Syf2	NP_081056.1	ILMN_1242551	005820474	S	148	GAAGCTCGTAAGCTGAATCACCAGGAAGTTGTGGAAGAAGACAAAAGACT				4qD3	Mus musculus SYF2 homolog, RNA splicing factor (S. cerevisiae) (Syf2), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	p29; 1110018L13Rik; RP23-79J18.4; Gcipip; mp29; Cbpin; D4Bwg1551e	p29; 1110018L13Rik; RP23-79J18.4; Gcipip; mp29; Cbpin; D4Bwg1551e
Mus musculus	MEEBO	ILMN_215709	ILMN_215709	GM1019	scl11829.6.1_99	XM_355442.1			38077446	XM_355442.1	Gm1019		ILMN_1217679	002320259	S	1009	CCTACTACCAAAAGTGGATCAGTGCTATTATCTCGAGAGCTCCTCCGGGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214211	ILMN_214211	KRTAP16-4	NM_130873.1	NM_130873.1		170654	21426872	NM_130873.1	Krtap16-4	NP_570943.1	ILMN_2645563	000770703	S	119	CCGCAGACTGGGCTATGGTTGTGGCTTTGGTGGCTACGGAGGCTTTGGAT	16	-	88885166-88885215	16qC3.3	Mus musculus keratin associated protein 16-4 (Krtap16-4), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	Riken	ILMN_202539	ILMN_202539	2410142K10RIK	ri|2410142K10|ZX00082I01|AK010807|1399					AK010807	2410142K10Rik		ILMN_2550376	004040040	S	1348	TTCCTGTTCCTGATTTTGCCTGGAGAAGCGCATCAAAGGTTGTAATTGTT										
Mus musculus	MEEBO	ILMN_192939	ILMN_192939	4930568H22RIK	scl075875.1_106						4930568H22Rik		ILMN_2492746	003370468	S	13	CTAGAGAAGCCCTAGCTCCATGCAGGACGAAGAGCCTAACTCCCCACCTC										
Mus musculus	RefSeq	ILMN_209048	ILMN_209048	CFH	NM_009888.3	NM_009888.3		12628	109627651	NM_009888.3	Cfh	NP_034018.2	ILMN_2722287	003130576	S	4212	CTGATTTACAGTGGATAAAGGATATATTGACTGATTCTTCAAATTAATAT	1	-	141982535-141982584	1qF	Mus musculus complement component factor h (Cfh), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with the C3b product of the complement cascade [goid 1851] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [evidence IDA]	Sas1; NOM; Mud-1; Sas-1	Sas1; NOM; Mud-1; Sas-1
Mus musculus	RefSeq	ILMN_209048	ILMN_209048	CFH	NM_009888.3	NM_009888.3		12628	109627651	NM_009888.3	Cfh	NP_034018.2	ILMN_2665189	004120367	S	346	CGCCCTGGATACCGAACACTTGGCACTATTGTAAAAGTATGCAAGAATGG	1	-	142059565-142059614	1qF	Mus musculus complement component factor h (Cfh), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with the C3b product of the complement cascade [goid 1851] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [evidence IDA]	Sas1; NOM; Mud-1; Sas-1	Sas1; NOM; Mud-1; Sas-1
Mus musculus	RefSeq	ILMN_209048	ILMN_209048	CFH	NM_009888.3	NM_009888.3		12628	109627651	NM_009888.3	Cfh	NP_034018.2	ILMN_2592066	006330564	S	3463	GTGGAAGTGATGTGTGAAAATGGGATATGGACAGAAAAACCAAAGTGCCG	1	-	141995448-141995497	1qF	Mus musculus complement component factor h (Cfh), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with the C3b product of the complement cascade [goid 1851] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [evidence IDA]	Sas1; NOM; Mud-1; Sas-1	Sas1; NOM; Mud-1; Sas-1
Mus musculus	RefSeq	ILMN_211824	ILMN_211824	TFRC	NM_011638.3	NM_011638.3		22042	34328492	NM_011638.3	Tfrc	NP_035768.1	ILMN_2860804	000620110	S	4355	GTCCCTTCAGTCTTCACAGTGTTTCTCTTGTACCAGTATGAGTATCACCG	16	+	32632446-32632495	16qB3	Mus musculus transferrin receptor (Tfrc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with transferrin to initiate a change in cell activity [goid 4998] [evidence TAS]; Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [evidence TAS]	Mtvr1; AU015758; AI195355; TFR; Trfr; p90; Mtvr-1; TFR1; E430033M20Rik; CD71; 2610028K12Rik; AI426448	Mtvr1; AU015758; AI195355; TFR; Trfr; p90; Mtvr-1; TFR1; E430033M20Rik; CD71; 2610028K12Rik; AI426448
Mus musculus	RefSeq	ILMN_211824	ILMN_211824	TFRC	NM_011638.3	NM_011638.3		22042	34328492	NM_011638.3	Tfrc	NP_035768.1	ILMN_2619848	001780524	S	4269	CACTAGGCTCTCAGGGTCTTGGCACCACTCGCCCAAGTTATATCCACCAG	16	+	32632360-32632409	16qB3	Mus musculus transferrin receptor (Tfrc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with transferrin to initiate a change in cell activity [goid 4998] [evidence TAS]; Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [evidence TAS]	Mtvr1; AU015758; AI195355; TFR; Trfr; p90; Mtvr-1; TFR1; E430033M20Rik; CD71; 2610028K12Rik; AI426448	Mtvr1; AU015758; AI195355; TFR; Trfr; p90; Mtvr-1; TFR1; E430033M20Rik; CD71; 2610028K12Rik; AI426448
Mus musculus	RefSeq	ILMN_216114	ILMN_216114	PSMB2	NM_011970.2	NM_011970.2		26445	31981326	NM_011970.2	Psmb2	NP_036100.2	ILMN_2949639	004070528	S	766	TTTGACGTTCACTCTTGATAGATGGTTAATTCAAAATAAAGCTGAATATA	4	+	126211961-126212010	4qD2.2	Mus musculus proteasome (prosome, macropain) subunit, beta type 2 (Psmb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	C7-I; AW108089; D4Wsu33e; AU045357	C7-I; AW108089; D4Wsu33e; AU045357
Mus musculus	RefSeq	ILMN_216114	ILMN_216114	PSMB2	NM_011970.2	NM_011970.2		26445	31981326	NM_011970.2	Psmb2	NP_036100.2	ILMN_2949632	003800470	S	469	GGCTCCTTTTGCAGCTCATGGCTATGGTGCCTTTCTGACTCTCAGCATCC	4	+	126208456-126208505	4qD2.2	Mus musculus proteasome (prosome, macropain) subunit, beta type 2 (Psmb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	C7-I; AW108089; D4Wsu33e; AU045357	C7-I; AW108089; D4Wsu33e; AU045357
Mus musculus	RefSeq	ILMN_210379	ILMN_210379	2610200G18RIK	NM_025998.2	NM_025998.2		67149	142367659	NM_025998.2	2610200G18Rik	NP_080274.1	ILMN_2605041	002070088	S	628	CGGTGGCTTTGACTCCTATGGATACCAGGCGCCGCAGAAGACGTCGCATT	4	+	130167614-130167663	4qD2.2	Mus musculus RIKEN cDNA 2610200G18 gene (2610200G18Rik), mRNA.				MGC144417; 2810426C15Rik	MGC144417; 2810426C15Rik
Mus musculus	RefSeq	ILMN_221492	ILMN_221492	GATM	NM_025961.4	NM_025961.4		67092	146134967	NM_025961.4	Gatm	NP_080237.1	ILMN_2736337	001690561	S	2126	GGTTGATGTTCAATATCTAACAGGTATAATGGCATCTTCGGTAATCTAAG				2qE5	Mus musculus glycine amidinotransferase (L-arginine:glycine amidinotransferase) (Gatm), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence ISO]	The chemical reactions and pathways resulting in the formation of creatine (N-(aminoiminomethyl)-N-methylglycine), a compound synthesized from the amino acids arginine, glycine, and methionine that occurs in muscle [goid 6601] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2 [goid 16813] [evidence IEA]; Catalysis of the reaction: L-arginine + glycine = L-ornithine + guanidinoacetate [goid 15068] [evidence ISO]	1810003P21Rik; AI314789; AT	1810003P21Rik; AI314789; AT
Mus musculus	Riken	ILMN_206964	ILMN_206964	HIP-1	ri|E230016G06|PX00210E14|AK087586|3403					AK087586	HIP-1		ILMN_1256182	006040288	S	3321	TACGTCTGTAGTTCCAGCCCACAGGATCAGAGGTTCAAGGTCATGCTGGC										
Mus musculus	RefSeq	ILMN_229007	ILMN_229007	CBX3	NM_007624.3	NM_007624.3		12417	108860694	NM_007624.3	Cbx3	NP_031650.3	ILMN_2847230	003460725	S	111	ATCGGAGCGGTGAACTCTTCAAGTCTCCGATTAAATTTAAAAAATGGCCT	6	+	51420725-51420738:51421815-51421843:51421844-51421850	6qB3	Mus musculus chromobox homolog 3 (Drosophila HP1 gamma) (Cbx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; A region of heterochromatin located near the centromere of a chromosome in the nucleus [goid 31618] [evidence IDA]; A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure [goid 10369] [evidence IDA]; The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 779] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	MGC118084; HP1g; M32	MGC118084; HP1g; M32
Mus musculus	RefSeq	ILMN_220337	ILMN_220337	DCPS	NM_027030.1	NM_027030.1		69305	21312255	NM_027030.1	Dcps	NP_081306.1	ILMN_2838199	005490537	S	739	TGAGGAACATTCTCCGGGAAGGACAAGAAGCCATCCTGAAGCGCTACCAG	9	-	34874490-34874515:34875978-34876001	9qA4	Mus musculus decapping enzyme, scavenger (Dcps), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; Cleavage of the 5'-cap of a nuclear mRNA triggered by shortening of the poly(A) tail to below a minimum functional length [goid 290] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA408441; 1700001E16Rik	AA408441; 1700001E16Rik
Mus musculus	RefSeq	ILMN_223613	ILMN_223613	SNCAIP	NM_026408.3	NM_026408.3		67847	89274170	NM_026408.3	Sncaip	NP_080684.2	ILMN_2766559	000840148	S	2784	AGAAAAAGACAAAGATAAGGGCAGGGCCCCCCAGAGGACTAGTGAATCCG	18	+	53066885-53066934	18qD1	Mus musculus synuclein, alpha interacting protein (synphilin) (Sncaip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence ISO]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	BB104594; MGC107459; 4933427B05Rik; SYPH1; 2810407O15Rik	BB104594; MGC107459; 4933427B05Rik; SYPH1; 2810407O15Rik
Mus musculus	RefSeq	ILMN_193803	ILMN_247727	6330411D24RIK	XR_005166.1	XR_005166.1		70725	94372675	XR_005166.1	6330411D24Rik		ILMN_2500591	003780259	S	216	ACGATGACCCCTTTCTACCCACGGAGAAAGAGACACTGAAGAACTCGATG				4qE1	PREDICTED: Mus musculus RIKEN cDNA 6330411D24 gene, transcript variant 2 (6330411D24Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_217221	ILMN_217221	ART2A	NM_007490.1	NM_007490.1		11871	6671576	NM_007490.1	Art2a	NP_031516.1	ILMN_2680474	004640500	S	657	CAAAGTCAAAACACAAAGTGTCGAACGGTATATCCAAATTTCTCTGGACT	7	-	108703137-108703186	7qE3	Mus musculus ADP-ribosyltransferase 2a (Art2a), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IEA]	Rt-6; Ly92a; Rt6; Rt6-1	Rt-6; Ly92a; Rt6; Rt6-1
Mus musculus	RefSeq	ILMN_222153	ILMN_222153	CCDC96	NM_025725.2	NM_025725.2		66717	31541960	NM_025725.2	Ccdc96	NP_080001.1	ILMN_2886872	007040315	S	3377	GGTATGAGCTACTTGTCCATAAAGTATCAGTCAATGCCTTCCAACCCAGC	5	+	36830613-36830662	5qB3	Mus musculus coiled-coil domain containing 96 (Ccdc96), mRNA.				4921513E08Rik	4921513E08Rik
Mus musculus	RefSeq	ILMN_222153	ILMN_222153	CCDC96	NM_025725.2	NM_025725.2		66717	31541960	NM_025725.2	Ccdc96	NP_080001.1	ILMN_2745415	006940563	S	3078	CCCCTCATGCTGGAGGCATTGTAGTCAATCACAAAACACTCTTCACTTGG	5	+	36830314-36830363	5qB3	Mus musculus coiled-coil domain containing 96 (Ccdc96), mRNA.				4921513E08Rik	4921513E08Rik
Mus musculus	Riken	ILMN_202816	ILMN_202816	APBB2	ri|6720431O15|PX00059F19|AK032770|1935					AK032770	Apbb2		ILMN_1260172	005080164	S	1692	CCTAGAGGAGCTGATTAATGGGAAGGGGCTAAGTTTCCCCAGGGCTCGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of S phase of mitotic cell cycle activity [goid 45749] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IDA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence NAS]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IDA]; Interacting selectively with the enzyme histone acetyltransferase [goid 35035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209088	ILMN_209088	TAS2R102	NM_199153.2	NM_199153.2		387339	154689742	NM_199153.2	Tas2r102	NP_954604.2	ILMN_2592404	000450379	S	957	GCTGAAAGGAGAGAATATCACAATTGCATATAGCAACCAAATAACTAGCT				6qG1	Mus musculus taste receptor, type 2, member 102 (Tas2r102), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence TAS]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Tas2r2; mGR02; STC 9-7; mt2r51	Tas2r2; mGR02; STC 9-7; mt2r51
Mus musculus	RefSeq	ILMN_236502	ILMN_236502	BC002163	NR_002445.2	NR_002445.2		170658	72004263	NR_002445.2	BC002163		ILMN_2946817	002000100	S	181	GCACACGGGATCGGTGGGACCCGGGCGAAAAAGGAGTGCAAGATAGAGTT	16	+	42955873-42955922	16qB4	Mus musculus cDNA sequence BC002163 (BC002163), non-coding RNA.					
Mus musculus	RefSeq	ILMN_197271	ILMN_253062	MED19	NM_025885.2	NM_025885.2		381379	144922679	NM_025885.2	Med19	NP_080161.1	ILMN_1214141	001190451	S	204	AGTGGCCCCTTCTACCTGATGCGGGAATTGCCAGGCAGCACAGAGCTGAC	2	+	84518785-84518818:84525348-84525363	2qD	Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast) (Med19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	LCMR1; DKFZp586K0524; 2410018M14Rik	LCMR1; DKFZp586K0524; 2410018M14Rik
Mus musculus	RefSeq	ILMN_215015	ILMN_253062	MED19	NM_025885.2	NM_025885.2		381379	144922679	NM_025885.2	Med19	NP_080161.1	ILMN_2654541	004610717	S	1793	CAACAGAGAGGATGTATTTGTTATGAAAAGCTAGGTTTTTCTCACCCAGC	2	+	84528129-84528178	2qD	Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast) (Med19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	LCMR1; DKFZp586K0524; 2410018M14Rik	LCMR1; DKFZp586K0524; 2410018M14Rik
Mus musculus	RefSeq	ILMN_218961	ILMN_218961	NHLH2	NM_178777.2	NM_178777.2		18072	31341049	NM_178777.2	Nhlh2	NP_848892.1	ILMN_2702425	007050050	S	3865	GTTCTCAGCTGTGAAACTCTTAAAGTAAGAGGTGTATTTTAGAGACAAGG	3	+	101818351-101818400	3qF2.2	Mus musculus nescient helix loop helix 2 (Nhlh2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The type of sexual cycle seen in female mammals, with physiologic changes in the endometrium that recur at regular intervals during the reproductive years [goid 42698] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	NSCL2; Nscl-2; Hen2; 6230401I09Rik	NSCL2; Nscl-2; Hen2; 6230401I09Rik
Mus musculus	RefSeq	ILMN_215071	ILMN_215071	2810007J24RIK	NM_175250.4	NM_175250.4		76971	141801867	NM_175250.4	2810007J24Rik	NP_780459.1	ILMN_2655184	007610520	S	1629	CCAGGTCATGAGCCTACTCAGTTTTTATGGTTCTCTACTTATGGAAGTAG	7	-	14996502-14996551	7qA1	Mus musculus RIKEN cDNA 2810007J24 gene (2810007J24Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + an alcohol = adenosine 3',5'-bisphosphate + an alkyl sulfate [goid 4027] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218484	ILMN_310343	4931429L15RIK	XM_001479853.1	XM_001479853.1		74361	149259951	XM_001479853.1	4931429L15Rik	XP_001479903.1	ILMN_1215449	002030064	S	1668	GGCCTCACAAAAGGAACACCTGGAGAAAAGGACTGCCTGAATAAATTCTG	9	-	46112093-46112103:46112104-46112142	9qA5.2	PREDICTED: Mus musculus RIKEN cDNA 4931429L15 gene (4931429L15Rik), mRNA.					
Mus musculus	Riken	ILMN_204507	ILMN_204507	B230327L12RIK	ri|B230327L12|PX00160F17|AK045964|2462					AK045964	B230327L12Rik		ILMN_1216271	007320446	S	2143	TCACAGCCAGCCTAAGGGAGCCTCGGGAGAACCGTTGGCATTTGGAGAAC										
Mus musculus	RefSeq	ILMN_210315	ILMN_210315	OSGEPL1	NM_028091.3	NM_028091.3		72085	141803430	NM_028091.3	Osgepl1	NP_082367.2	ILMN_1226615	002510411	S	2049	CGATGAAACCAAAGGGTGAAGGATTTACTAATGTTGGCAGATGAAGAAAG	1	+	53380674-53380723	1qC1.1	Mus musculus O-sialoglycoprotein endopeptidase-like 1 (Osgepl1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	MGC13061; 2610001M19Rik; AA416452	MGC13061; 2610001M19Rik; AA416452
Mus musculus	RefSeq	ILMN_210315	ILMN_210315	OSGEPL1	NM_028091.3	NM_028091.3		72085	141803430	NM_028091.3	Osgepl1	NP_082367.2	ILMN_1225723	001450369	S	1081	GCGGTACAGCATGCAACAGCGTGCCACCTTGCGAAAAGAACACATCGCGC	1	+	53377039-53377088	1qC1.1	Mus musculus O-sialoglycoprotein endopeptidase-like 1 (Osgepl1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	MGC13061; 2610001M19Rik; AA416452	MGC13061; 2610001M19Rik; AA416452
Mus musculus	RefSeq	ILMN_214710	ILMN_214710	ERF	NM_010155.2	NM_010155.2		13875	40254587	NM_010155.2	Erf	NP_034285.2	ILMN_2684661	002650673	S	1678	AGCACGCCACAGCCCAACTCTCCCTGGAGCACCGAGATTCCTGAGAGCTG	7	-	26029261-26029267:26029268-26029310	7qA3	Mus musculus Ets2 repressor factor (Erf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214710	ILMN_214710	ERF	NM_010155.2	NM_010155.2		13875	40254587	NM_010155.2	Erf	NP_034285.2	ILMN_2651005	001440612	S	3117	GGACCATGTGAAAGGGAGGTGTGCGATGTTAGCCTTCTGCTTGGGATCCT	7	-	26027822-26027871	7qA3	Mus musculus Ets2 repressor factor (Erf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214710	ILMN_214710	ERF	NM_010155.2	NM_010155.2		13875	40254587	NM_010155.2	Erf	NP_034285.2	ILMN_2650998	007100364	S	3111	AGGCCAGGACCATGTGAAAGGGAGGTGTGCGATGTTAGCCTTCTGCTTGG	7	-	26027828-26027877	7qA3	Mus musculus Ets2 repressor factor (Erf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187944	ILMN_187944	BRD3	scl19502.17_227				31981063	NM_023336	Brd3		ILMN_1222231	006290477	S	20	TGAGTCCATTGTAAGTAGTTTAGCTTGTTTTTTGCAATGCCGGCCTCAAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	Riken	ILMN_202534	ILMN_202534	2410095B20RIK	ri|2410095B20|ZX00082C01|AK010755|1507					AK010755	2410095B20Rik		ILMN_1225657	001980068	S	1352	GGCTTCCGTGGGCCTGGAAGTCATCACCAGAGTCCATAAGACAGGGTGTC										
Mus musculus	RefSeq	ILMN_258871	ILMN_258871	WDR51B	NM_027740.3	NM_027740.3		382406	47271516	NM_027740.3	Wdr51b	NP_082016.1	ILMN_2974418	002760202	S	2547	GGTGTGGGAATGGAGAGGTTGTTCTCCAAGCGGTTTCGGTTTTGTGCCTC	10	+	98627496-98627545	10qC3-qD1	Mus musculus WD repeat domain 51B (Wdr51b), mRNA.				4933430F16Rik	4933430F16Rik
Mus musculus	RefSeq	ILMN_221804	ILMN_245376	4930435E12RIK	XM_156106.6	XM_156106.6		74663	94400187	XM_156106.6	4930435E12Rik	XP_156106.2	ILMN_1238782	005860424	S	1119	ACACAGAGACGAAAGGCAGAGCGACTGAAGACAGACGTCCCAAGCACTGC	16	-	38812513-38812535:38812536-38812562	16qB4	PREDICTED: Mus musculus RIKEN cDNA 4930435E12 gene (4930435E12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197455	ILMN_230496	LOC218945	XR_002995.1	XR_002995.1		218945	94397990	XR_002995.1	LOC218945		ILMN_1228325	003610053	S	1137	ACTCCCTGGACTATGGGGGAGTCAGTGCCAAATCTGAGATGAGCATTCTC				14qB	PREDICTED: Mus musculus similar to Adenylyl cyclase-associated protein 1 (CAP 1) (LOC218945), mRNA.					
Mus musculus	MEEBO	ILMN_221959	ILMN_221959	LIPE	scl31633.12_17	NM_010719.2			11968060	NM_010719.2	Lipe		ILMN_2742636	000380767	S	1950	AGCCAAGGTGTCCTCCACATGCCCCTCTACACGTCACCCATAGTCAAGAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of triacylglycerol, any triester of glycerol [goid 19433] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 46340] [evidence IMP];  [goid 6361] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the reactions: diacylglycerol + H2O = monoacylglycerol + a carboxylate, triacylglycerol + H2O = diacylglycerol + a carboxylate, and monoacylglycerol + H2O = glycerol + a carboxylate [goid 33878] [evidence IEA]; Interacting selectively with an unprocessed ribosomal RNA transcript [goid 42134] [evidence ISS]; Any activity that brings about termination of transcription by RNA polymerase I [goid 3716] [evidence ISS]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]		
Mus musculus	MEEBO	ILMN_194701	ILMN_194701	9030203C11RIK	scl38176.1_592				31343230	NM_177277	9030203C11Rik		ILMN_1260436	001450673	S	13	GGGGAATTACTGACAACAAAGGCAATGCAGTGAGCCACTGAGCTGGTAGC										
Mus musculus	MEEBO	ILMN_194701	ILMN_194701	9030203C11RIK	scl38176.1_592				31343230	NM_177277	9030203C11Rik		ILMN_1243798	007210324	S	1570	ACCTGGGGCCATGTGGTGCTTTCTCACCTGTGCTGCCTAAAACAGCTTTC										
Mus musculus	RefSeq	ILMN_221821	ILMN_221821	BC050811	NM_178418.2	NM_178418.2		241943	31341509	NM_178418.2	BC050811	NP_848505.1	ILMN_2782841	001400167	S	2101	GTGAGCCTAGAGGCTGCCTGGGGCTGAGAACAAAGAAAAACAAACCCGGG	3	-	36199123-36199172	3qB	Mus musculus cDNA sequence BC050811 (BC050811), mRNA.				MGC58791	MGC58791
Mus musculus	RefSeq	ILMN_221821	ILMN_221821	BC050811	NM_178418.2	NM_178418.2		241943	31341509	NM_178418.2	BC050811	NP_848505.1	ILMN_2782842	001090731	S	2401	GTCGTCAAATCCACTGTCTCCTGCGATACATTTTGACAAGGAGCTCCGCC	3	-	36198823-36198872	3qB	Mus musculus cDNA sequence BC050811 (BC050811), mRNA.				MGC58791	MGC58791
Mus musculus	RefSeq	ILMN_220759	ILMN_220759	BBS4	NM_175325.2	NM_175325.2		102774	31341606	NM_175325.2	Bbs4	NP_780534.1	ILMN_2726448	000050037	S	2181	CAGTTTAAGTAGTAGAGTCAAGGGCTGGTCTGGAATCGGCACCAAGAACT	9	-	59170036-59170085	9qB	Mus musculus Bardet-Biedl syndrome 4 (human) (Bbs4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	A process that is carried out at the cellular level and by which the structure of a cilium is organized. Morphogenesis pertains to the creation of form [goid 60271] [evidence IMP]; A process by which a protein is transported to, or maintained in, a location within an organelle [goid 33365] [evidence IDA]; Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light [goid 46548] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking [goid 21756] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids [goid 19216] [evidence IMP]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the formation of a flagellum [goid 45724] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function [goid 1895] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW537059; AW742241; D9Ertd464e	AW537059; AW742241; D9Ertd464e
Mus musculus	RefSeq	ILMN_201286	ILMN_201286	LOC382369	XM_356467.1	XM_356467.1			38090522	XM_356467.1	LOC382369		ILMN_2541754	000430594	S	782	CTCGAGGGCCGCGTGTTCCAACTGCCATTCATCGGCGTCAGAGCTCCTCA										
Mus musculus	RefSeq	ILMN_195414	ILMN_250555	EG434078	XM_924614.1	XM_924614.1		434078	82902640	XM_924614.1	EG434078	XP_929707.1	ILMN_1215693	003440019	S	705	ATGGGCGGCCGCGGCAGGCCCTCCGAGCGTGGTGGAGCCGTTCTGTGAGA				6qE3	PREDICTED: Mus musculus predicted gene, EG434078 (EG434078), mRNA.					
Mus musculus	RefSeq	ILMN_202623	ILMN_226258	C330002I19RIK	XM_902478.2	XM_902478.2		77480	94392450	XM_902478.2	C330002I19Rik	XP_907571.1	ILMN_1234861	007550767	S	941	CGGAACATACGTGAACATACCTGACAGGGTAGGGGCCTACTTCAGATTTG	12	+	25584061-25584110	12qA1.3	PREDICTED: Mus musculus RIKEN cDNA C330002I19 gene, transcript variant 4 (C330002I19Rik), mRNA.					
Mus musculus	MEEBO	ILMN_186019	ILMN_186019	BCL9	scl21790.1.1_97				51708290	XM_358351	Bcl9		ILMN_2431924	004560356	S	2	TGTATTTAAGTAAACAAACATACAAATAGCTATAGTACAACATTTAGAAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]			
Mus musculus	MEEBO	ILMN_186019	ILMN_186019	BCL9	scl21790.1.1_97				51708290	XM_358351	Bcl9		ILMN_2600255	006620747	S	2286	GCCCTGGTGTACTCTTCCTTGCCCGCCTTGTTTCTTGTTCTCCTTTTCTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]			
Mus musculus	RefSeq	ILMN_215416	ILMN_215416	CSPG4	NM_139001.2	NM_139001.2		121021	146231959	NM_139001.2	Cspg4	NP_620570.2	ILMN_2659224	005690553	S	7224	TCAAGAGCTGGAGACTTCCTCGGCTCTCTTAGACCTGGAGCGCCATGGGG				9qB	Mus musculus chondroitin sulfate proteoglycan 4 (Cspg4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling [goid 48771] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The orderly movement of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system [goid 8347] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AN2; NG2; 4732461B14Rik	AN2; NG2; 4732461B14Rik
Mus musculus	RefSeq	ILMN_198984	ILMN_243455	GM684	XM_924862.2	XM_924862.2		270157	94385871	XM_924862.2	Gm684	XP_929955.1	ILMN_1216097	002100022	S	724	GGCCACCACTGGCGATTTCTATAAGAGGGAGACAAGCTGTGATGCCTGCT				9qA5.3	PREDICTED: Mus musculus gene model 684, (NCBI) (Gm684), mRNA.					
Mus musculus	RefSeq	ILMN_222037	ILMN_222037	APEH	NM_146226.1	NM_146226.1		235606	22122788	NM_146226.1	Apeh	NP_666338.1	ILMN_1250816	000620626	S	2254	GGTTTCCTGGGCTCTGGACTCCGAATGAGTGGGCAGAGGACTATGGACTC	9	-	107987758-107987807	9qF2	Mus musculus acylpeptide hydrolase (Apeh), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	MGC38101	MGC38101
Mus musculus	Riken	ILMN_203673	ILMN_203673	POLYDOM-PENDING	ri|9530018I21|PX00111P11|AK035333|3242					AK035333	Polydom-pending		ILMN_1256678	003870088	S	3119	GCGAGCCGAGCTGAGGACTAGCAGTAACAGAAGATCAAAGACTATCACCC										
Mus musculus	RefSeq	ILMN_220098	ILMN_220098	RPS15A	NM_170669.2	NM_170669.2		267019	46358374	NM_170669.2	Rps15a	NP_733769.1	ILMN_2717621	006270092	S	5025	CCTTTTCATTCAACCTCTCCTATGTGCTCTCCTCTTACTCAATTTCTCGA	7	-	125247949-125247998	7qF2	Mus musculus ribosomal protein S15a (Rps15a), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC107552; A630031B11Rik	MGC107552; A630031B11Rik
Mus musculus	RefSeq	ILMN_222736	ILMN_318000	KIF7	XM_001478674.1	XM_001478674.1		16576	149257379	XM_001478674.1	Kif7	XP_001478724.1	ILMN_2754057	004070274	S	678	CTGCCTGGTGCATGTATCCTACCTGGAACTCTACAAGGAAGAGTTCCGAG					PREDICTED: Mus musculus kinesin family member 7 (Kif7), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	Riken	ILMN_205564	ILMN_205564	A930010I20RIK	ri|A930010I20|PX00065P10|AK044389|3059					AK044389	A930010I20Rik		ILMN_1254105	006620731	S	2989	CACTTAGGTAGCAGGAGTAGTCAGATCTTGAGTTTGAGACCAGCCAAACC										
Mus musculus	RefSeq	ILMN_226878	ILMN_226878	SSBP1	NM_028358.2	NM_028358.2		381760	48374437	NM_028358.2	Ssbp1	NP_082634.1	ILMN_3096012	003840131	A	397	GGGGCTCGTATATTTGTGGAAGGGAAAGTGGACTATGGCGAGTACATGGA	6	+	40426833-40426834:40427922-40427969	6qB1	Mus musculus single-stranded DNA binding protein 1 (Ssbp1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]	MtSSB; G630031O20Rik; 2810480P10Rik; mtDBP	MtSSB; G630031O20Rik; 2810480P10Rik; mtDBP
Mus musculus	RefSeq	ILMN_226878	ILMN_226878	SSBP1	NM_028358.2	NM_028358.2		381760	48374437	NM_028358.2	Ssbp1	NP_082634.1	ILMN_3023573	006020653	I	696	TCAGGGGGACTCTGTGGGGTATGAAAGCAACTTGCCCCTGCAGTACATAC	6	+	40428219-40428268	6qB1	Mus musculus single-stranded DNA binding protein 1 (Ssbp1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]	MtSSB; G630031O20Rik; 2810480P10Rik; mtDBP	MtSSB; G630031O20Rik; 2810480P10Rik; mtDBP
Mus musculus	RefSeq	ILMN_211355	ILMN_211355	AKAP3	NM_009650.1	NM_009650.1		11642	6753025	NM_009650.1	Akap3	NP_033780.1	ILMN_2614990	000520356	S	2661	GGTGGCTGCCTCAGAGCTCAATGTCCCTATTTTGTACTTTGCTGGTGACG	6	+	126816808-126816857	6qF3	Mus musculus A kinase (PRKA) anchor protein 3 (Akap3), mRNA.	A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]	Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IMP]		
Mus musculus	RefSeq	ILMN_186057	ILMN_240374	LOC630337	XM_619042.2	XM_619042.2		630337	82948753	XM_619042.2	LOC630337	XP_619042.2	ILMN_2432255	003290139	S	97	TCTCAGTCTCTGTCCCTCACCTGCACTGTCACTGGCTACTCAATCACCAG					PREDICTED: Mus musculus similar to Ig heavy chain V region 1B43 precursor (LOC630337), mRNA.					
Mus musculus	RefSeq	ILMN_185132	ILMN_244766	MRPS18C	NM_026826.1	NM_026826.1		68735	58037128	NM_026826.1	Mrps18c	NP_081102.1	ILMN_2747345	006330041	S	449	GTATTTGTGAAGTTCCTGCCAATAAACCTCTAAGTGGTTGTCAGCAGACT	5	+	101233433-101233482	5qE4	Mus musculus mitochondrial ribosomal protein S18C (Mrps18c), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	1110037D14Rik	1110037D14Rik
Mus musculus	RefSeq	ILMN_215449	ILMN_316406	LOC100047841	XM_001479263.1	XM_001479263.1		100047841	149254417	XM_001479263.1	LOC100047841	XP_001479313.1	ILMN_1255630	004610064	S	3518	CCTGGCTGTCATTCTGGTGCTCATGATACTCTTAATAATCATATGCATCA					PREDICTED: Mus musculus similar to a disintegrin and metalloproteinase domain 1b, transcript variant 1 (LOC100047841), mRNA.					
Mus musculus	MEEBO	ILMN_189497	ILMN_189497	GLB1L	scl074577.1_28						Glb1l		ILMN_2461783	003130546	S	2	CTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A multimeric enzyme complex that in E. coli is a heterooctamer made up of four alpha subunits and four beta subunits. Catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides [goid 9341] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220254	ILMN_220254	STAP1	NM_019992.3	NM_019992.3		56792	142385057	NM_019992.3	Stap1	NP_064376.1	ILMN_2719803	003170433	S	139	ACACTATTGGACGGAGCTGAGAGGGACCACGCTGTTCTTTTACACTGACA	5	+	86507022-86507071	5qE1	Mus musculus signal transducing adaptor family member 1 (Stap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IDA]	STAP-1; Brdg1	STAP-1; Brdg1
Mus musculus	RefSeq	ILMN_190072	ILMN_190072	ZFP235	NM_019941.2	NM_019941.2		56525	119392087	NM_019941.2	Zfp235	NP_064325.2	ILMN_2466926	003400598	S	3085	CCCTGCATTCATATTGAGTCGTATTCCCCAGTAATCGTGTAAGGGACCAT	7	+	24927893-24927942	7qA3	Mus musculus zinc finger protein 235 (Zfp235), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC107482; 0610030O19Rik; AI428448	MGC107482; 0610030O19Rik; AI428448
Mus musculus	RefSeq	ILMN_216588	ILMN_216588	EPHB1	NM_173447.2	NM_173447.2		270190	40254273	NM_173447.2	Ephb1	NP_775623.2	ILMN_2672903	001940458	S	4392	GGACTGGCTGAAGCCGTGTGGCATGGAGGAAAGTCTCTGTCCTATCTGTG	9	-	101824623-101824672	9qF1	Mus musculus Eph receptor B1 (Ephb1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions [goid 21545] [evidence IMP]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IDA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IDA]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA];  [goid 8046] [evidence IDA];  [goid 5005] [evidence TAS]	Elkh; Hek6; Net; Elk; Cek6; AW488255; 9330129L11	Elkh; Hek6; Net; Elk; Cek6; AW488255; 9330129L11
Mus musculus	RefSeq	ILMN_190903	ILMN_236541	LOC630347	XM_903474.2	XM_903474.2		630347	94393696	XM_903474.2	LOC630347	XP_908567.2	ILMN_2474286	004890471	S	267	GAGCTGGGTCCGCCAGCCTCCAGGAAAGGCACTTGAGTGGTTGGGTTTTA					PREDICTED: Mus musculus similar to Ig heavy chain V region M167 precursor (LOC630347), mRNA.					
Mus musculus	Riken	ILMN_201797	ILMN_201797	MAPBPIP-PENDING	ri|2010111E04|ZX00057N22|AK008395|435					AK008395	Mapbpip-pending		ILMN_2544661	001990129	S	327	AGGCTGACTTCGAACTTGCAATGATTATCCTGCTTCTGCCACCTCAACCC										
Mus musculus	RefSeq	ILMN_190403	ILMN_312656	SLC12A8	NM_001083902.1	NM_001083902.1		171286	144226247	NM_001083902.1	Slc12a8	NP_001077371.1	ILMN_2721789	004390136	S	2166	GCCAGATACTAGGTATGACTATGGCTTCCACGTGTGCCCAACCTGAAGAG	16	+	33663337-33663386	16qB3	Mus musculus solute carrier family 12 (potassium/chloride transporters), member 8 (Slc12a8), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	CCC9; E330020C02Rik	CCC9; E330020C02Rik
Mus musculus	RefSeq	ILMN_208983	ILMN_208983	FAR2	NM_178797.3	NM_178797.3		330450	118130627	NM_178797.3	Far2	NP_848912.1	ILMN_2591449	001470563	S	3270	GCTTACCAATAATCTTCCTTACGTTACTGATTCCTGTGAATTGGATGTGC	6	+	148131155-148131204	6qG3	Mus musculus fatty acyl CoA reductase 2 (Far2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of wax, which includes C16 and C18 fatty acids [goid 10025] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a long-chain aldehyde + CoA + NADP+ = a long-chain acyl-CoA + NADPH [goid 50062] [evidence IDA]	FAR2; MGC67167; A230046P18; AW048109; BC055759	FAR2; MGC67167; A230046P18; AW048109; BC055759
Mus musculus	RefSeq	ILMN_220015	ILMN_262038	4930599N23RIK	XR_005171.1	XR_005171.1		75379	94377216	XR_005171.1	4930599N23Rik		ILMN_1257546	000620577	S	1301	GGGATTAGAGTAGACCAATTGGCAAACCCTGGAACCCAGTGAGAGATTCT				6qB1	PREDICTED: Mus musculus RIKEN cDNA 4930599N23 gene (4930599N23Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_247228	ILMN_247228	CLEC3B	NM_011606.1	NM_011606.1		21922	6755820	NM_011606.1	Clec3b	NP_035736.1	ILMN_2845778	003310026	S	953	TGAACATTGGTGAGTGGGGCGGGCCTGGTGGTTCTCAGGGAGAGACAAGT	9	+	123066414-123066463	9qF4	Mus musculus C-type lectin domain family 3, member b (Clec3b), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Tna	Tna
Mus musculus	MEEBO	ILMN_185193	ILMN_185193	BC021785	scl38037.7_190				47894380	NM_001001489	BC021785		ILMN_2424950	003990689	S	4	CATCAGCTGTCTCATGGGCGCTATTTTAATCACTGAGGGTTGCTGTCCAG							The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196697	ILMN_196697	LOC236579	XM_142333.2	XM_142333.2			38096179	XM_142333.2	LOC236579		ILMN_1220945	001580148	S	246	AAATAAGCAGAAGCACCCCATTCTGGAAGAGATGCTGGGAAGTGCCCCCC										
Mus musculus	RefSeq	ILMN_205145	ILMN_214771	RINT1	NM_177323.3	NM_177323.3		72772	62899066	NM_177323.3	Rint1	NP_796297.2	ILMN_1248855	005890639	S	665	CTCCTGGTGACCATGACAGAACTGGACATCCAGCTTCAGGAGTCATCCTG	5	+	23311180-23311229	5qA3	Mus musculus RAD50 interactor 1 (Rint1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		1500019C06Rik; Rint-1; 2810450M21Rik	1500019C06Rik; Rint-1; 2810450M21Rik
Mus musculus	RefSeq	ILMN_201441	ILMN_201441	LOC385169	XM_358099.1	XM_358099.1			38093889	XM_358099.1	LOC385169		ILMN_1232730	001300605	S	326	AAGGCATTGTAGCCATTAGGAGCTGTAGAGACTGTCGAATCACTCTCCGG										
Mus musculus	RefSeq	ILMN_210533	ILMN_210533	GPSN2	NM_134118.3	NM_134118.3		106529	146149093	NM_134118.3	Gpsn2	NP_598879.1	ILMN_2606579	006620603	S	537	CTGGAGACTCTCTTCGTGCACCGATTCTCTCACGGAACCATGCCTTTGCG				8qC2	Mus musculus glycoprotein, synaptic 2 (Gpsn2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]	D17Ertd178e; 2410016D23Rik; AI173355; A230102P12Rik; SC2	D17Ertd178e; 2410016D23Rik; AI173355; A230102P12Rik; SC2
Mus musculus	RefSeq	ILMN_210533	ILMN_210533	GPSN2	NM_134118.3	NM_134118.3		106529	146149093	NM_134118.3	Gpsn2	NP_598879.1	ILMN_2710784	000060220	S	975	TACCTGAAGGAGTTCCGCGACTACCCGCCCCTGCGCATGCCCATTATTCC				8qC2	Mus musculus glycoprotein, synaptic 2 (Gpsn2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]	D17Ertd178e; 2410016D23Rik; AI173355; A230102P12Rik; SC2	D17Ertd178e; 2410016D23Rik; AI173355; A230102P12Rik; SC2
Mus musculus	RefSeq	ILMN_205764	ILMN_234754	CEBPG	NM_009884.3	NM_009884.3		12611	148226896	NM_009884.3	Cebpg	NP_034014.1	ILMN_1244024	000060086	S	795	GCACCCCTTGCTTCAGTGGCTGAACTCGGTCTCCTTCCATTGGAGGTTGT				7qB1	Mus musculus CCAAT/enhancer binding protein (C/EBP), gamma (Cebpg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [evidence IDA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6337] [evidence TAS]; The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors [goid 42267] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [evidence IMP]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA repair [goid 45739] [evidence ISS]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]; The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 1431100] [evidence IEP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]	Gpe1bp; C/EBP[g]; GPE1-BP; Ig/EBP; C/EBPgamma	Gpe1bp; C/EBP[g]; GPE1-BP; Ig/EBP; C/EBPgamma
Mus musculus	RefSeq	ILMN_184892	ILMN_234754	CEBPG	NM_009884.3	NM_009884.3		12611	148226896	NM_009884.3	Cebpg	NP_034014.1	ILMN_2422448	005290328	S	4005	GAGTATGAATACCATCTTGACTTACACAGGGTATATGCCTGGATATGGAA				7qB1	Mus musculus CCAAT/enhancer binding protein (C/EBP), gamma (Cebpg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [evidence IDA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6337] [evidence TAS]; The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors [goid 42267] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [evidence IMP]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA repair [goid 45739] [evidence ISS]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]; The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 1431100] [evidence IEP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]	Gpe1bp; C/EBP[g]; GPE1-BP; Ig/EBP; C/EBPgamma	Gpe1bp; C/EBP[g]; GPE1-BP; Ig/EBP; C/EBPgamma
Mus musculus	Riken	ILMN_206764	ILMN_206764	E030001I17RIK	ri|E030001I17|PX00203D16|AK086790|2126					AK086790	E030001I17Rik		ILMN_2582534	004480113	S	1739	GGTGGGGCTTGTCCCTCATCCAGAAGGTAAGATAGAGCCTGTTGGTGTCC										
Mus musculus	MEEBO	ILMN_192459	ILMN_192459	TNFRSF5	scl0021939.1_74	NM_011611.1			6755828	NM_011611.1	Tnfrsf5		ILMN_2488266	005050176	S	15	GAAACAGCTTTTAAAACACATTCCAAGGCAGGTAAGATGGCTTTTGTGGG										
Mus musculus	Riken	ILMN_206607	ILMN_206607	E030034J16RIK	ri|E030034J16|PX00206J05|AK087212|3468					AK087212	E030034J16Rik		ILMN_1254574	001090040	S	3129	TCTTGGCTGGGGTTGGACTTCAAGGGCAGATGGAAAACAGCTCCTCTAGG										
Mus musculus	RefSeq	ILMN_243147	ILMN_243147	EG434510	NM_001034892.1	NM_001034892.1		434510	85702247	NM_001034892.1	EG434510	NP_001030064.1	ILMN_2989109	000060102	S	584	CCGGTCAACATCACTGCACAAGGAAGGACCAAGGCCCCAGAGCCTCGTTA	9	+	102607638-102607656:102614507-102614535:102614536-102614537	9qF1	Mus musculus predicted gene, EG434510 (EG434510), mRNA.					
Mus musculus	RefSeq	ILMN_212166	ILMN_212166	NAPA	NM_025898.1	NM_025898.1		108124	13385391	NM_025898.1	Napa	NP_080174.1	ILMN_2865822	001010601	S	2060	CTTACTACAACAGACAGGAGGACCCAAGGTCAGATATTCAGCACCCATGC	7	+	15276225-15276274	7qA2	Mus musculus N-ethylmaleimide sensitive fusion protein attachment protein alpha (Napa), mRNA.	A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 1a (or orthologs thereof) [goid 70044] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IMP]	Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence ISO]	1500039N14Rik; SNARE; RA81; AW209189; hyh; a-SNAP; SNAPA	1500039N14Rik; SNARE; RA81; AW209189; hyh; a-SNAP; SNAPA
Mus musculus	RefSeq	ILMN_218893	ILMN_218893	PLRG1	NM_016784.3	NM_016784.3		53317	141801146	NM_016784.3	Plrg1	NP_058064.2	ILMN_1244226	001070139	S	1672	CGTGCTTGGTGTTGATGAGGATATCCGGTCTTTCATGAAAGCTCACTTGC	3	+	82876114-82876163	3qE3	Mus musculus pleiotropic regulator 1, PRL1 homolog (Arabidopsis) (Plrg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C80566; AA958940	C80566; AA958940
Mus musculus	RefSeq	ILMN_260182	ILMN_260182	BC057627	NM_198631.1	NM_198631.1		330474	38348503	NM_198631.1	BC057627	NP_941033.1	ILMN_2977903	004220739	S	3183	CAGCACTCAGGAGGCAGGGTCAGGAGGATTACAGGTTCAAAGCCAGTCTG	7	+	17022576-17022625	7qA2	Mus musculus cDNA sequence BC057627 (BC057627), mRNA.				Gm768; KIAA1064; mKIAA1064; MGC67629	Gm768; KIAA1064; mKIAA1064; MGC67629
Mus musculus	RefSeq	ILMN_216326	ILMN_260182	BC057627	NM_198631.1	NM_198631.1		330474	38348503	NM_198631.1	BC057627	NP_941033.1	ILMN_2669789	001740482	S	3511	ACAATGATCGTCGCATGGCTCTCCCACCCCCTTTTGTACTCAGTATCTGT	7	+	17022904-17022953	7qA2	Mus musculus cDNA sequence BC057627 (BC057627), mRNA.				Gm768; KIAA1064; mKIAA1064; MGC67629	Gm768; KIAA1064; mKIAA1064; MGC67629
Mus musculus	RefSeq	ILMN_200452	ILMN_200452	LOC381727	XM_355703.1	XM_355703.1			38082008	XM_355703.1	LOC381727		ILMN_1254544	001820689	S	596	TCTGGAATTGAGAGGATGAAGGACTCCCAGCTCAGTGTCCTCCTACCTGC										
Mus musculus	Riken	ILMN_203605	ILMN_203605	A930010M14RIK	ri|A930010M14|PX00065N14|AK044398|2701					AK044398	A930010M14Rik		ILMN_1247911	006330241	S	2228	CGGGAGATCTTTGTAGCCTGGCTGCCCTGGGACACCCTCTATAAAACTGG										
Mus musculus	RefSeq	ILMN_222375	ILMN_222375	FHIT	NM_010210.2	NM_010210.2		14198	118197794	NM_010210.2	Fhit	NP_034340.1	ILMN_2748680	006980630	S	832	GCCACTAGTATTATGCTTCCATCACGATGACAAATAGGCTAGCTTCCCAA	14	-	10382713-10382762	14qA1	Mus musculus fragile histidine triad gene (Fhit), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IDA]	Catalysis of the reaction: P1-P3-bis(5'-adenosyl) triphosphate + H2O = ADP + AMP [goid 47710] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AW045638; Fra14A2	AW045638; Fra14A2
Mus musculus	MEEBO	ILMN_194115	ILMN_194115	KRTDAP	scl0064661.1_269						Krtdap		ILMN_2503521	000610707	S	10	GAGCCCAGTAGAAGAGGAGGCAAGCATGGAATCTGAAGTCCATCTACGAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence ISO]			
Mus musculus	RefSeq	ILMN_195579	ILMN_195579	V1RI9	NM_134225.1	NM_134225.1		171259	21717766	NM_134225.1	V1ri9	NP_598986.1	ILMN_2516844	002260372	S	651	CAGCAGTGGGTCTATGTCTCTCCGTCTGTACAAACATCATGTCCGTGTCC	13	-	22310989-22311038	13qA3.1	Mus musculus vomeronasal 1 receptor, I9 (V1ri9), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	Riken	ILMN_203410	ILMN_203410	6720451B11RIK	ri|6720451B11|PX00059M05|AK032783|1757					AK032783	6720451B11Rik		ILMN_2557096	005340176	S	1506	GCCTATAATTTCCATGTTGGAGGGCAAAGCCAGGGTCCCTAGAGCTGGCC										
Mus musculus	RefSeq	ILMN_200787	ILMN_254117	THOC2	NM_001033422.1	NM_001033422.1		331401	125656162	NM_001033422.1	Thoc2	NP_001028594.1	ILMN_1252122	003940082	S	2134	GCCATGACTGGTGGGGAGCAGCTAAAGGCTGAGGGTGGTTATTTCGGCCA	X	-	39186648-39186665:39188275-39188306	XqA4	Mus musculus THO complex 2 (Thoc2), mRNA.				Gm1139; 6330441O12Rik; D130005M13Rik; Tho2; Gm1793	Gm1139; 6330441O12Rik; D130005M13Rik; Tho2; Gm1793
Mus musculus	RefSeq	ILMN_211868	ILMN_254117	THOC2	NM_001033422.1	NM_001033422.1		331401	125656162	NM_001033422.1	Thoc2	NP_001028594.1	ILMN_1213567	005900050	S	6938	CTGCTTTATTGCTCCATGCAGAAAACCTAAAACTGTTGTGTTGTATGTTA	X	-	39148802-39148851	XqA4	Mus musculus THO complex 2 (Thoc2), mRNA.				Gm1139; 6330441O12Rik; D130005M13Rik; Tho2; Gm1793	Gm1139; 6330441O12Rik; D130005M13Rik; Tho2; Gm1793
Mus musculus	RefSeq	ILMN_211868	ILMN_254117	THOC2	NM_001033422.1	NM_001033422.1		331401	125656162	NM_001033422.1	Thoc2	NP_001028594.1	ILMN_1254807	006480398	S	3367	GAGACGGGCGAATATACTCACATCAGGAATATATTGATTGTACTAACAAA	X	-	39176655-39176704	XqA4	Mus musculus THO complex 2 (Thoc2), mRNA.				Gm1139; 6330441O12Rik; D130005M13Rik; Tho2; Gm1793	Gm1139; 6330441O12Rik; D130005M13Rik; Tho2; Gm1793
Mus musculus	RefSeq	ILMN_226818	ILMN_226818	9430028L06RIK	NM_001039485.1	NM_001039485.1		225617	87116665	NM_001039485.1	9430028L06Rik	NP_001034574.1	ILMN_2797584	006560010	S	2450	TCCTGGCGTCATGGTCAACGTGCAACACATAGCTCTTCTCACCGCTGGGG	18	-	63170750-63170799	18qE1	Mus musculus RIKEN cDNA 9430028L06 gene (9430028L06Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5930434P17	5930434P17
Mus musculus	RefSeq	ILMN_194842	ILMN_226818	9430028L06RIK	NM_001039485.1	NM_001039485.1		225617	87116665	NM_001039485.1	9430028L06Rik	NP_001034574.1	ILMN_2510128	007560474	S	2598	GGACCCTGGACCCAGAAGATGTGGCTGGAAGGACAAGCCTCATTCTAAGC	18	-	63170602-63170651	18qE1	Mus musculus RIKEN cDNA 9430028L06 gene (9430028L06Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5930434P17	5930434P17
Mus musculus	RefSeq	ILMN_201704	ILMN_244313	2610036L11RIK	XM_488549.3	XM_488549.3		66311	94387936	XM_488549.3	2610036L11Rik	XP_488549.2	ILMN_2543929	003890682	S	105	GCCCCGCGCCTTCCTCAAGCGCACCTTAAAGCAGAAGAAGCCTCACCTAG	10	-	29920192-29920241	10qA4	PREDICTED: Mus musculus RIKEN cDNA 2610036L11 gene, transcript variant 1 (2610036L11Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_196706	ILMN_196706	LOC279923	XM_206995.2	XM_206995.2			38080528	XM_206995.2	LOC279923		ILMN_1230352	005050019	S	681	AGAGATGCCCATGATCATACAAGAAGGAACTCCAAATAGACTGGACCAGA										
Mus musculus	RefSeq	ILMN_212531	ILMN_212531	SI	NM_021882.4	NM_021882.4		20431	142353045	NM_021882.4	Si	NP_068682.2	ILMN_1230512	001780176	S	579	AAGTGACTGTCTACCACCGACGGGGTTCCCAGAGCTACGTGCCCCTTGCT	10	+	128152667-128152716	10qD3	Mus musculus silver (Si), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence IEA]; The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]		D12S53Eh; D10H12S53E; gp87; gp100; Pmel17	D12S53Eh; D10H12S53E; gp87; gp100; Pmel17
Mus musculus	RefSeq	ILMN_212531	ILMN_212531	SI	NM_021882.4	NM_021882.4		20431	142353045	NM_021882.4	Si	NP_068682.2	ILMN_2627503	004920575	S	1865	GGCCTTGGAGAAAACAGCCCGCTCCTCAGTGGACAGCAGGTCTGATCATT	10	+	128157029-128157073:128157074-128157078	10qD3	Mus musculus silver (Si), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence IEA]; The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]		D12S53Eh; D10H12S53E; gp87; gp100; Pmel17	D12S53Eh; D10H12S53E; gp87; gp100; Pmel17
Mus musculus	RefSeq	ILMN_199905	ILMN_199905	LOC384053	XM_357390.1	XM_357390.1			38078848	XM_357390.1	LOC384053		ILMN_2536907	001980520	S	836	GCCAGCAGCTTCAAGCCCGGGCTCCAAAGAGTAAAATCCAATCAATGTCC										
Mus musculus	Riken	ILMN_203752	ILMN_203752	A130009M03RIK	ri|A130009M03|PX00121B17|AK037351|3469					AK037351	A130009M03Rik		ILMN_1218642	003450477	S	3248	CAGTAAAGGGGGGGGGTGCAACCATTTCTCCCGCATTTTCCCCATGACAG										
Mus musculus	RefSeq	ILMN_218699	ILMN_242190	ARHGEF17	NM_001081116.1	NM_001081116.1		207212	124487438	NM_001081116.1	Arhgef17	NP_001074585.1	ILMN_2699080	003130176	S	8256	CTGCAAAGGATTTAAGTGCCCAGCAACATGGGGCTGCTCTCTAGGGGCCA	7	-	108020204-108020253	7qE3	Mus musculus Rho guanine nucleotide exchange factor (GEF) 17 (Arhgef17), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISO]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]	mKIAA0337; AW558066; BC035332; 8030463K16; AI428794	mKIAA0337; AW558066; BC035332; 8030463K16; AI428794
Mus musculus	RefSeq	ILMN_196551	ILMN_227198	CYB5D2	NM_001024926.2	NM_001024926.2		192986	145386511	NM_001024926.2	Cyb5d2	NP_001020097.1	ILMN_1218915	000290017	S	361	TGCACAGAGACTGGATTGGTGTCCCCAGGAAGTTGTATAAGCCAGGGGCC				11qB4	Mus musculus cytochrome b5 domain containing 2 (Cyb5d2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	9330151E16Rik; RP23-327G1.2; Gm2	9330151E16Rik; RP23-327G1.2; Gm2
Mus musculus	RefSeq	ILMN_230098	ILMN_230098	GUK1	NM_008193.2	NM_008193.2		14923	31982306	NM_008193.2	Guk1	NP_032219.1	ILMN_2967576	001690377	S	792	CTGACCACAAGGTGGCTCTGCACCGTGGGCTGACTCACTGACTGAATGAC	11	-	58997477-58997526	11qB1.3	Mus musculus guanylate kinase 1 (Guk1), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + GMP = ADP + GDP [goid 4385] [evidence IDA]; Catalysis of the reaction: ATP + GMP = ADP + GDP [goid 4385] [evidence ISO]	AL033300; Guk-1; AV026611; AL033299; GMK; AA409738	AL033300; Guk-1; AV026611; AL033299; GMK; AA409738
Mus musculus	RefSeq	ILMN_196800	ILMN_217091	HPDL	NM_146256.3	NM_146256.3		242642	142348524	NM_146256.3	Hpdl	NP_666368.1	ILMN_2525848	006660519	S	438	GCCACTGTACAGCCTGGACCCGCATCATTCGGTGCCCAGTGCCACGAACC	4	-	116493626-116493675	4qD1	Mus musculus 4-hydroxyphenylpyruvate dioxygenase-like (Hpdl), mRNA.		The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of the reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2 [goid 3868] [evidence IEA]	A830048M07Rik; RP23-109A3.5; MGC31514; BC034099; Gloxd1	A830048M07Rik; RP23-109A3.5; MGC31514; BC034099; Gloxd1
Mus musculus	RefSeq	ILMN_223720	ILMN_223720	OLFR1504	NM_146634.1	NM_146634.1		258627	33239093	NM_146634.1	Olfr1504	NP_666845.1	ILMN_2847717	000520066	S	540	CCCACCCCTGATGAAGCTTGCCTGTAGTGAGACCAAGTTACAGGAACAAG	19	-	13962109-13962158	19qA	Mus musculus olfactory receptor 1504 (Olfr1504), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR212-2	MOR212-2
Mus musculus	RefSeq	ILMN_223720	ILMN_223720	OLFR1504	NM_146634.1	NM_146634.1		258627	33239093	NM_146634.1	Olfr1504	NP_666845.1	ILMN_2768126	001980739	S	590	AATCTTCCTTTTTGCTTTTTTGGTCATCATAACTAGTGTTTCAGTGATCC	19	-	13962059-13962108	19qA	Mus musculus olfactory receptor 1504 (Olfr1504), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR212-2	MOR212-2
Mus musculus	Riken	ILMN_205228	ILMN_205228	GABT1	ri|E130309B01|PX00209G08|AK053798|1211					AK053798	Gabt1		ILMN_1226343	005700228	S	936	CCCAGCGGAAACTCAACCACACGGGAAAAGGAAAAGAGGCAACCTACACT										
Mus musculus	RefSeq	ILMN_191206	ILMN_250173	CCNE2	NM_001037134.1	NM_001037134.1		12448	80861470	NM_001037134.1	Ccne2	NP_001032211.1	ILMN_1245789	006020722	S	1103	GCTGCTGCCGCCTTATGTCATTTTACCTCCATTGAAGTGGTTAAGAAAGC	4	+	11128509-11128558	4qA1	Mus musculus cyclin E2 (Ccne2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IMP]	Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IDA]		
Mus musculus	Riken	ILMN_203557	ILMN_203557	EPHA5	ri|9330174B07|PX00106G07|AK034289|2930					AK034289	Epha5		ILMN_1231684	007040196	S	2374	CATTGGCCAAAATGTGGATGCAGTCTGCAGAGCCCGACAATGAGGTGGCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198098	ILMN_244054	EG627636	XM_892318.2	XM_892318.2		627636	149268542	XM_892318.2	EG627636	XP_897411.2	ILMN_1244091	001170008	S	2373	GGTCTCTATGGAAGTATTTTCTATCTTGGCTTCCAGCATAGCACTCCTGG	17	+	19949341-19949390	17qA3.2	PREDICTED: Mus musculus predicted gene, EG627636 (EG627636), mRNA.					
Mus musculus	Riken	ILMN_205621	ILMN_205621	PFTK1	ri|D130028L24|PX00183O02|AK051283|3149					AK051283	PFTK1		ILMN_1221520	000630040	S	2974	TGCAGATAACCCCCATGACTGCAGGGACGGCATTGTTTCATTTCGCACAG										
Mus musculus	RefSeq	ILMN_200387	ILMN_200387	LOC386391	XM_359199.1	XM_359199.1			38081495	XM_359199.1	LOC386391		ILMN_1229513	000010450	S	511	CATGCAGAAGGACAGCACACACATGCAGAACAGCACATACATGCAGAAGG										
Mus musculus	RefSeq	ILMN_218835	ILMN_218835	SEC22B	NM_011342.2	NM_011342.2		20333	31560551	NM_011342.2	Sec22b	NP_035472.1	ILMN_2906847	001240497	S	1151	GCGGCCCTCTGGGGAGTCCTAACTTTAATCGACATTCCTGTGTTGGTAGC	3	+	98007059-98007108	3qF2.2	Mus musculus SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (Sec22b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence TAS]		4930564D15Rik; ERS-24; C81333; Sec22l1; AI480645; AA517334	4930564D15Rik; ERS-24; C81333; Sec22l1; AI480645; AA517334
Mus musculus	MEEBO	ILMN_184607	ILMN_184607	2500001H09RIK	scl31046.16_228				50897275	NM_029078	2500001H09Rik		ILMN_2420039	007560204	S	2	ATGCTTATTTAAACTTGGACACTGATGCCATCAAGCAACTAACAAATATA										
Mus musculus	MEEBO	ILMN_194466	ILMN_194466	LPHN3	scl27659.20_2				51711026	XM_205556	Lphn3		ILMN_1224136	002650324	S	6	TCATGATACTGAGGAGCAGTGGGGTTCTTCAGAGTTGTAGCACAGTGGCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194466	ILMN_194466	LPHN3	scl27659.20_2				51711026	XM_205556	Lphn3		ILMN_2537421	004830309	S	3087	GCTGTATATCATGCTGGTGGAGGTCTTTGAGAGCGAGCATTCCCGTAGGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216880	ILMN_216880	PCK2	NM_028994.2	NM_028994.2		74551	142382732	NM_028994.2	Pck2	NP_083270.1	ILMN_2676406	005810301	S	3168	CATAAAATTCCCAATAATAAAAATATGAGGTATTTTTTAAATAGGCAGTT	14	+	56168622-56168671	14qC3	Mus musculus phosphoenolpyruvate carboxykinase 2 (mitochondrial) (Pck2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IEA]; Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 [goid 4611] [evidence IEA]; Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2 [goid 4613] [evidence IEA]	1810010O14Rik; 9130022B02Rik	1810010O14Rik; 9130022B02Rik
Mus musculus	RefSeq	ILMN_249400	ILMN_249400	OLFR885	NM_001011739.1	NM_001011739.1		257885	58801271	NM_001011739.1	Olfr885	NP_001011739.1	ILMN_2805419	003390615	S	586	CTGGTACTTTTCATTGTTGTTGGTGTCAATATAACAGTGCCCAGCCTGAC	9	+	37869492-37869541	9qA4	Mus musculus olfactory receptor 885 (Olfr885), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR162-12	MOR162-12
Mus musculus	RefSeq	ILMN_219213	ILMN_219213	FTMT	NM_026286.2	NM_026286.2		67634	142369731	NM_026286.2	Ftmt	NP_080562.1	ILMN_2705758	003060730	S	997	CCCAGCCTGAAAGATAGCCCAGAATACTATGGTATGACAGGGATGGGAGA	18	+	52492186-52492235	18qD1	Mus musculus ferritin mitochondrial (Ftmt), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence TAS]; Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O [goid 4322] [evidence TAS]	Fth3; MtF; MGC144340; MGC144339; 4930447C24Rik	Fth3; MtF; MGC144340; MGC144339; 4930447C24Rik
Mus musculus	RefSeq	ILMN_191353	ILMN_191353	YAP1	NM_009534.2	NM_009534.2		22601	118130327	NM_009534.2	Yap1	NP_033560.1	ILMN_1248293	004760327	S	3781	GAAGTTCCTAAGTTTGCAGCTGCTTAACCTCCCCCACAAGGTGGATGTGC	9	-	7932283-7932332	9qA1	Mus musculus yes-associated protein 1 (Yap1), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IGI]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IGI]	YAP65; Yap; AI325207; 65kDa	YAP65; Yap; AI325207; 65kDa
Mus musculus	Riken	ILMN_203047	ILMN_203047	A430104L24RIK	ri|A430104L24|PX00064J15|AK040516|1438					AK040516	A430104L24Rik		ILMN_1225026	004250309	S	953	CCTCAAAACCAAGCTGGTCCAAAAGATGCCTCACCAAACCACGAGGGCAC										
Mus musculus	RefSeq	ILMN_213718	ILMN_213718	ADH5	NM_007410.2	NM_007410.2		11532	31982510	NM_007410.2	Adh5	NP_031436.2	ILMN_1242178	001300040	S	288	CCCACTCTACATCCCACAGTGTGGAGAATGCAAGTTTTGTCTGAATCCTA	3	+	138110829-138110878	3qG3	Mus musculus alcohol dehydrogenase 5 (class III), chi polypeptide (Adh5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A organ system process carried out by any of the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange [goid 3016] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions [goid 51409] [evidence IMP]; The posttranslational S-nitrosylation of peptidyl-cysteine to form peptidyl-S-nitrosyl-L-cysteine [goid 18119] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is increased [goid 45777] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of formaldehyde (methanal, H2C=O), the simplest aldehyde [goid 46294] [evidence IMP]; The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 1523] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Catalysis of the reaction: S-(hydroxymethyl)glutathione + NAD(P)+ = S-formylglutathione + NAD(P)H + H+ [goid 51903] [evidence IMP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]	Adh-5; GSNOR; Adh3	Adh-5; GSNOR; Adh3
Mus musculus	RefSeq	ILMN_213718	ILMN_213718	ADH5	NM_007410.2	NM_007410.2		11532	31982510	NM_007410.2	Adh5	NP_031436.2	ILMN_2852979	004040719	S	1444	GCTGATCTTGAATTCATCCACATGGGTTTAGAATAGCCGAAATCAGAATA	3	+	138118374-138118423	3qG3	Mus musculus alcohol dehydrogenase 5 (class III), chi polypeptide (Adh5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A organ system process carried out by any of the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange [goid 3016] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions [goid 51409] [evidence IMP]; The posttranslational S-nitrosylation of peptidyl-cysteine to form peptidyl-S-nitrosyl-L-cysteine [goid 18119] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is increased [goid 45777] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of formaldehyde (methanal, H2C=O), the simplest aldehyde [goid 46294] [evidence IMP]; The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 1523] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Catalysis of the reaction: S-(hydroxymethyl)glutathione + NAD(P)+ = S-formylglutathione + NAD(P)H + H+ [goid 51903] [evidence IMP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]	Adh-5; GSNOR; Adh3	Adh-5; GSNOR; Adh3
Mus musculus	RefSeq	ILMN_213718	ILMN_213718	ADH5	NM_007410.2	NM_007410.2		11532	31982510	NM_007410.2	Adh5	NP_031436.2	ILMN_1217813	004230427	S	1262	CGAGACTGTAATCATGAACTAGGCAAATTCCACATAAACAATTGCTGCTC	3	+	138118192-138118241	3qG3	Mus musculus alcohol dehydrogenase 5 (class III), chi polypeptide (Adh5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A organ system process carried out by any of the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange [goid 3016] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions [goid 51409] [evidence IMP]; The posttranslational S-nitrosylation of peptidyl-cysteine to form peptidyl-S-nitrosyl-L-cysteine [goid 18119] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is increased [goid 45777] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of formaldehyde (methanal, H2C=O), the simplest aldehyde [goid 46294] [evidence IMP]; The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 1523] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Catalysis of the reaction: S-(hydroxymethyl)glutathione + NAD(P)+ = S-formylglutathione + NAD(P)H + H+ [goid 51903] [evidence IMP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence IDA]	Adh-5; GSNOR; Adh3	Adh-5; GSNOR; Adh3
Mus musculus	RefSeq	ILMN_211929	ILMN_211929	PLAC1	NM_019538.3	NM_019538.3		56096	24475807	NM_019538.3	Plac1	NP_062411.1	ILMN_2835771	000270725	S	678	CCTACCACGTGTTCACCTTGCCAGAGCCTAGCGAACAACCCAACTGCAGC	X	-	49314971-49315020	XqA5	Mus musculus placental specific protein 1 (Plac1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [pmid 10995572] [evidence IEP]		Epcs26; DXWsu72e	Epcs26; DXWsu72e
Mus musculus	RefSeq	ILMN_184453	ILMN_250404	FARSA	NM_025648.2	NM_025648.2		66590	118130298	NM_025648.2	Farsa	NP_079924.1	ILMN_2698699	006110044	S	3154	GTGTGCCTCTAGGGCTAGGGGAGGTTGGAAGCACGTGTTGCTTGAGTCTT	8	+	87390753-87390802	8qC3	Mus musculus phenylalanyl-tRNA synthetase, alpha subunit (Farsa), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling phenylalanine to phenylalanyl-tRNA, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6432] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe) [goid 4826] [evidence IEA]	0610012A19Rik; Farsla	0610012A19Rik; Farsla
Mus musculus	MEEBO	ILMN_218449	ILMN_218449	LOC238447	IGHV8S9_U23024_Ig_heavy_variable_8S9_28	XM_138373.1			20860070	XM_138373.1	LOC238447		ILMN_2774462	006760307	S	98	CCTCCCAGACCCTCAGTCTGACTTGTTCTTTCTCTGGGTTTTCACTGAAC										
Mus musculus	RefSeq	ILMN_224441	ILMN_224441	BC032265	NM_181420.2	NM_181420.2		238024	31340883	NM_181420.2	BC032265	NP_852085.1	ILMN_2913980	004180014	S	1531	AGGCTCCTGATCACTGCAAGCCCCCAGTACCGGTCAGTTGATTCTGTGGG	11	+	121291639-121291688	11qE2	Mus musculus cDNA sequence BC032265 (BC032265), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	FN3K-RP; MGC40640	FN3K-RP; MGC40640
Mus musculus	RefSeq	ILMN_211977	ILMN_211977	PHF6	NM_027642.1	NM_027642.1		70998	33563291	NM_027642.1	Phf6	NP_081918.1	ILMN_1230912	006100646	S	3473	GCAGCTTCACCATCTGGCTAGGCGTCACATTGTGGTAGGAGTATTAGATC	X	+	50309243-50309292	XqA5	Mus musculus PHD finger protein 6 (Phf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4931428F02Rik; 2700007B13Rik; mKIAA1823	4931428F02Rik; 2700007B13Rik; mKIAA1823
Mus musculus	RefSeq	ILMN_211977	ILMN_211977	PHF6	NM_027642.1	NM_027642.1		70998	33563291	NM_027642.1	Phf6	NP_081918.1	ILMN_1237295	005720537	S	4009	CAGAGTAACATGATCTACAGATCTGCTATTGAATCGAATCTATGTACTTG	X	+	50309779-50309828	XqA5	Mus musculus PHD finger protein 6 (Phf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4931428F02Rik; 2700007B13Rik; mKIAA1823	4931428F02Rik; 2700007B13Rik; mKIAA1823
Mus musculus	RefSeq	ILMN_252375	ILMN_252375	LOC631002	NM_001081565.1	NM_001081565.1		631002	125858423	NM_001081565.1	LOC631002	NP_001075034.1	ILMN_2985249	006840255	S	213	GAGTGGCAAGGAGCAGGACAAGCAATCCCTGGTCGAAGGCATTGAAGTTC	X	-	8266949-8266998	XqA1.1	Mus musculus synovial sarcoma, X member B family member (LOC631002), mRNA.					
Mus musculus	RefSeq	ILMN_212775	ILMN_212775	SDC1	NM_011519.1	NM_011519.1		20969	6755437	NM_011519.1	Sdc1	NP_035649.1	ILMN_2756943	005130075	S	938	GCCCCCGGTGGACGAAGGAGCCACAGGTGCTTCTCAGAGCCTTTTGGACA	12	+	8817366-8817415	12qA1.1	Mus musculus syndecan 1 (Sdc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	Synd; AA409076; AA408134; CD138; syn-1; Synd1	Synd; AA409076; AA408134; CD138; syn-1; Synd1
Mus musculus	RefSeq	ILMN_212775	ILMN_212775	SDC1	NM_011519.1	NM_011519.1		20969	6755437	NM_011519.1	Sdc1	NP_035649.1	ILMN_2927799	006590541	S	2835	ACTTAGCTCAGTGATGTTCCAGCTCCTGGCTAGGCTGCTCAGCCACTCAG	12	+	8819474-8819523	12qA1.1	Mus musculus syndecan 1 (Sdc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	Synd; AA409076; AA408134; CD138; syn-1; Synd1	Synd; AA409076; AA408134; CD138; syn-1; Synd1
Mus musculus	RefSeq	ILMN_192156	ILMN_249825	KLF12	NM_010636.3	NM_010636.3		16597	118130075	NM_010636.3	Klf12	NP_034766.2	ILMN_2750338	005960360	S	5364	CCCAACTAGAGAATCAGCTTATAATACTATGTAACTTTGCCTGCGTTTTA	14	-	100270179-100270228	14qE2.3	Mus musculus Kruppel-like factor 12 (Klf12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AP-2rep; D530033K05Rik; B130052C06Rik; AI225908; 2700063E05Rik; AI315654	AP-2rep; D530033K05Rik; B130052C06Rik; AI225908; 2700063E05Rik; AI315654
Mus musculus	RefSeq	ILMN_192156	ILMN_249825	KLF12	NM_010636.3	NM_010636.3		16597	118130075	NM_010636.3	Klf12	NP_034766.2	ILMN_2737130	004120743	S	1811	AAGTAGCCCTCTGTGCTAGATAGCGCTCATACCTTGTCCTCATGCCATCC	14	-	100273732-100273781	14qE2.3	Mus musculus Kruppel-like factor 12 (Klf12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AP-2rep; D530033K05Rik; B130052C06Rik; AI225908; 2700063E05Rik; AI315654	AP-2rep; D530033K05Rik; B130052C06Rik; AI225908; 2700063E05Rik; AI315654
Mus musculus	RefSeq	ILMN_192156	ILMN_249825	KLF12	NM_010636.3	NM_010636.3		16597	118130075	NM_010636.3	Klf12	NP_034766.2	ILMN_1231246	000110735	S	1823	GTGCTAGATAGCGCTCATACCTTGTCCTCATGCCATCCCCCAAAAGAACC	14	-	100273720-100273769	14qE2.3	Mus musculus Kruppel-like factor 12 (Klf12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AP-2rep; D530033K05Rik; B130052C06Rik; AI225908; 2700063E05Rik; AI315654	AP-2rep; D530033K05Rik; B130052C06Rik; AI225908; 2700063E05Rik; AI315654
Mus musculus	MEEBO	ILMN_193283	ILMN_193283	AA691260	scl23681.9_222				21704091	NM_145554	AA691260		ILMN_2495743	003120102	S	20	ATGAGACTGTTGACCATTATCACATTATTGGTAATACATAGCCAGTGGCT										
Mus musculus	MEEBO	ILMN_193283	ILMN_193283	AA691260	scl23681.9_222				21704091	NM_145554	AA691260		ILMN_2606136	001300762	S	2484	CCAAGTGGCCAGGGTCCGGGCGCGAGGGGGACTGTGTGGTGTTGGGTGAT										
Mus musculus	RefSeq	ILMN_219353	ILMN_219353	2310030G06RIK	NM_025865.2	NM_025865.2		66952	31981164	NM_025865.2	2310030G06Rik	NP_080141.1	ILMN_2707595	002750309	S	957	TCCGTTTTTACACCTATACCCCAAAACCGAAGAGAAACGCTCTTCGGAAA	9	-	50548031-50548080	9qA5.3	Mus musculus RIKEN cDNA 2310030G06 gene (2310030G06Rik), mRNA.				AV017521; 2610024D04Rik	AV017521; 2610024D04Rik
Mus musculus	RefSeq	ILMN_223420	ILMN_223420	CREB3L4	NM_030080.2	NM_030080.2		78284	142368602	NM_030080.2	Creb3l4	NP_084356.1	ILMN_1213549	006110133	S	1373	GGCAGGGCACCTCAAATGCTTGTCATACATTTGTGATTTCATTTCTTCTT	3	-	90042833-90042882	3qF1	Mus musculus cAMP responsive element binding protein 3-like 4 (Creb3l4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Tisp40alpha; mJAL; CREB4; JAL; 1700012K17Rik; Atce1; CREB3; Tisp40beta; AV258827; 5330432F22Rik; AIBZIP; TISP40; AV040530	Tisp40alpha; mJAL; CREB4; JAL; 1700012K17Rik; Atce1; CREB3; Tisp40beta; AV258827; 5330432F22Rik; AIBZIP; TISP40; AV040530
Mus musculus	Riken	ILMN_203893	ILMN_203893	C530016G21RIK	ri|C530016G21|PX00081O17|AK049656|1978					AK049656	C530016G21Rik		ILMN_1223272	000380064	S	524	CCAGAGTGGTGGACTCTTTAACAAAGAAAATTGTGGATTCTTCTTTCCGG										
Mus musculus	RefSeq	ILMN_250128	ILMN_250128	OTTMUSG00000010009	NM_001007077.1	NM_001007077.1		194227	55741546	NM_001007077.1	OTTMUSG00000010009	NP_001007078.1	ILMN_2900709	000770543	S	1673	CTTCCTCAGAGCTGGTGAATGGATGTTGCATCTGCAGAAAGTATCAAGCG	4	+	143385351-143385400	4qE1	Mus musculus predicted gene, OTTMUSG00000010009 (OTTMUSG00000010009), mRNA.				BC084594; MGC:91194; MGC91194	BC084594; MGC:91194; MGC91194
Mus musculus	RefSeq	ILMN_209396	ILMN_209396	CDK4	NM_009870.2	NM_009870.2		12567	31560614	NM_009870.2	Cdk4	NP_034000.1	ILMN_2690976	006860463	S	446	TATAGACCAGGACCTGAGGACATACCTGGACAAAGCACCTCCACCGGGCC	10	+	126501707-126501756	10qD3	Mus musculus cyclin-dependent kinase 4 (Cdk4), mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IDA]	Crk3	Crk3
Mus musculus	RefSeq	ILMN_209396	ILMN_209396	CDK4	NM_009870.2	NM_009870.2		12567	31560614	NM_009870.2	Cdk4	NP_034000.1	ILMN_2646203	004560296	S	1207	CACCTCTCCTTACGAGGTTCACCCCCATTACCCTCCCCTAGCTCTACACT	10	+	126504211-126504260	10qD3	Mus musculus cyclin-dependent kinase 4 (Cdk4), mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IDA]	Crk3	Crk3
Mus musculus	RefSeq	ILMN_199966	ILMN_199966	LOC381602	XM_355557.1	XM_355557.1			38079279	XM_355557.1	LOC381602		ILMN_1244186	005220437	S	883	CACATGATGAATCCTGGCGAATGCACACAGACAGGAGCAGGTACTGTGGG										
Mus musculus	Riken	ILMN_202917	ILMN_202917	PLA2G1BR	ri|4732468I02|PX00051J03|AK076366|3436					AK076366	Pla2g1br		ILMN_1257195	004490138	S	3338	ATACCAGCAGCCAAGTGTAGATAAAGACCAGCTTGGGAGGGGGGTGGGGG										
Mus musculus	RefSeq	ILMN_221906	ILMN_221906	RHOX4B	NM_021300.2	NM_021300.2		57737	89242132	NM_021300.2	Rhox4b	NP_067275.1	ILMN_3082698	006960458	A	189	AAGTTGAATGGTGGGAAGACACAGACAGTCTTACCACTGGATGGAGAGGG	X	+	34847189-34847198:34847389-34847428	XqA3.3	Mus musculus reproductive homeobox 4B (Rhox4b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ehox; Rhox4; 5430432L21Rik; Rhox4.2	Ehox; Rhox4; 5430432L21Rik; Rhox4.2
Mus musculus	RefSeq	ILMN_221906	ILMN_221906	RHOX4B	NM_021300.2	NM_021300.2		57737	89242132	NM_021300.2	Rhox4b	NP_067275.1	ILMN_3012158	004810674	I	607	GACATCTGGCAAGATGGATAGGTGTGAGTGAAGCCAGAGTTATGACATGG	X	+	34850197-34850240:34851550-34851555	XqA3.3	Mus musculus reproductive homeobox 4B (Rhox4b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ehox; Rhox4; 5430432L21Rik; Rhox4.2	Ehox; Rhox4; 5430432L21Rik; Rhox4.2
Mus musculus	Riken	ILMN_204117	ILMN_204117	MSX2	ri|B130054K15|PX00158D17|AK045272|1242					AK045272	Msx2		ILMN_2562502	006620487	S	1186	TGGCTGCTTGCTAGAACCTCAAAGTACAGGCAGAGGCATGCCACCTGTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198003	ILMN_198003	HEL308-PENDING	XM_132236.4	XM_132236.4			38080210	XM_132236.4	Hel308-pending		ILMN_2720522	004050280	S	2468	ACTGGAGAGCCTTCTTCATCTGATCTACCTAACCACGCCCTATGACCTGG										
Mus musculus	Riken	ILMN_205571	ILMN_205571	PTPRM	ri|9430031L24|PX00108J17|AK034753|2714					AK034753	Ptprm		ILMN_1244354	004640273	S	2386	GCCCAGACAAGATCACTCAGTAAGGACGACGGGAAGGAGCCTGGGTCACT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	Riken	ILMN_205433	ILMN_205433	MAN2B1	ri|E330014I09|PX00212E05|AK054315|3458					AK054315	Man2b1		ILMN_1233046	005390274	S	3253	TACGAGCTGGAAAGAGGCTAAGAGGACTGGCGCCCATTCAGAGGACTCAC						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IMP]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IDA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IMP]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216643	ILMN_216643	OLFR215	NM_146446.1	NM_146446.1		258438	33239317	NM_146446.1	Olfr215	NP_666657.1	ILMN_2673515	002970014	S	638	CTATCGCATACAGCAACATAGTCATCACAATTGTGCGTCTCCCATCGGCT	6	-	116532275-116532324	6qE3	Mus musculus olfactory receptor 215 (Olfr215), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR119-2	MOR119-2
Mus musculus	Riken	ILMN_202254	ILMN_202254	4933408G09RIK	ri|4933408G09|PX00020I05|AK016737|1251					AK016737	4933408G09Rik		ILMN_1260208	001740681	S	495	TCCGGTAACAGAAGCCTATCACGGAGTCTGAATGGTGCGGCATGGGCGGA										
Mus musculus	RefSeq	ILMN_217606	ILMN_213430	3110001I20RIK	NM_177608.3	NM_177608.3		70354	124487340	NM_177608.3	3110001I20Rik	NP_808276.2	ILMN_2685418	004570603	S	6168	ACGGTATTTTATATGCTTCCAGTGTTTGGAAAAGAATTAGTCAAAAGGAA	2	-	125563301-125563350	2qF1	Mus musculus RIKEN cDNA 3110001I20 gene (3110001I20Rik), mRNA.				C630011I23; RP23-367K9.1; AI504340	C630011I23; RP23-367K9.1; AI504340
Mus musculus	Riken	ILMN_205834	ILMN_205834	REPS1	ri|A630049G04|PX00145M04|AK041967|3107					AK041967	Reps1		ILMN_1254340	002750435	S	2707	GGGGAGTAACTTCACCAGATCCCATGTCCGGGGTGATTCAAGAGCAAGAT								Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_201261	ILMN_201261	LOC385004	XM_357982.1	XM_357982.1			38090240	XM_357982.1	LOC385004		ILMN_2541667	004670040	S	253	ATAGTGAAGCAGAGAGAAGGCCAACTGCAGCAACTGCGAGCACTGTTAGC										
Mus musculus	Riken	ILMN_206235	ILMN_206235	D230012P12RIK	ri|D230012P12|PX00187N02|AK084245|1391					AK084245	D230012P12Rik		ILMN_1252520	004180129	S	1250	GGGCATGGCCAACCAAGCTCTAGAAGTCCAGCCTGGCACACTGTCCATCA										
Mus musculus	RefSeq	ILMN_208792	ILMN_208792	UBXN1	NM_146093.1	NM_146093.1		225896	22122590	NM_146093.1	Ubxn1	NP_666205.1	ILMN_2589583	006040037	S	961	CCACCATCTCTTTCTAACCTCTTCATCTTTGATAAAGCACTGACGTTTCC	19	+	8950074-8950123	19qA	Mus musculus UBX domain protein 1 (Ubxn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			4930455J02Rik; 2B28; MGC6696; T25529	4930455J02Rik; 2B28; MGC6696; T25529
Mus musculus	RefSeq	ILMN_185584	ILMN_237560	RASA2	NM_053268.2	NM_053268.2		114713	114158698	NM_053268.2	Rasa2	NP_444498.2	ILMN_2428252	001190612	S	4052	GTGCTACGCTGTGACTCCTGGTCCATACTGAAGCTTAAAAGAGTCCTTCA	9	-	96441316-96441365	9qE3.3	Mus musculus RAS p21 protein activator 2 (Rasa2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AU023900; GAP1m; AA517451; 5430433H21Rik	AU023900; GAP1m; AA517451; 5430433H21Rik
Mus musculus	RefSeq	ILMN_185584	ILMN_237560	RASA2	NM_053268.2	NM_053268.2		114713	114158698	NM_053268.2	Rasa2	NP_444498.2	ILMN_2715328	001990491	S	2321	CTGCAGAAAATGGAAGAGACCTGTGGGTCTATAGCTGTGTATCAGGGGCC	9	-	96444850-96444884:96445207-96445221	9qE3.3	Mus musculus RAS p21 protein activator 2 (Rasa2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AU023900; GAP1m; AA517451; 5430433H21Rik	AU023900; GAP1m; AA517451; 5430433H21Rik
Mus musculus	RefSeq	ILMN_223393	ILMN_223393	5830434P21RIK	NM_172661.2	NM_172661.2		227723	34328384	NM_172661.2	5830434P21Rik	NP_766249.2	ILMN_1240274	000670470	S	8405	CCTTCCCTCCGGGTCAGTCCCTGTTGTTTCTCCTTTCAAATATGTGATTG				2qB	Mus musculus RIKEN cDNA 5830434P21 gene (5830434P21Rik), mRNA.				AI173903; D430039P21; mKIAA0515	AI173903; D430039P21; mKIAA0515
Mus musculus	RefSeq	ILMN_219584	ILMN_219584	PUS3	NM_023292.3	NM_023292.3		67049	142385846	NM_023292.3	Pus3	NP_075781.2	ILMN_1227514	005490196	S	1684	GCACTTGTCAGTTATATGCACCTGGAAATCCGTGCCTTGTGTTCAAATCC	9	+	35374657-35374706	9qA4	Mus musculus pseudouridine synthase 3 (Pus3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The intramolecular conversion of uridine to pseudouridine in a tRNA molecule [goid 31119] [evidence IDA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IDA]	5730412F04Rik; 2610020J05Rik	5730412F04Rik; 2610020J05Rik
Mus musculus	RefSeq	ILMN_214079	ILMN_224487	NDOR1	NM_001082476.1	NM_001082476.1		78797	126723292	NM_001082476.1	Ndor1	NP_001075945.1	ILMN_1226703	001980609	S	4492	GGCTCATTGGTGACACAATGTAAGGTGTAACATTTCAGGCTGAGTCCTAT	2	-	25100548-25100597	2qA3	Mus musculus NADPH dependent diflavin oxidoreductase 1 (Ndor1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	Ndor; 4930447P04Rik; NR1	Ndor; 4930447P04Rik; NR1
Mus musculus	RefSeq	ILMN_202759	ILMN_224487	NDOR1	NM_001082476.1	NM_001082476.1		78797	126723292	NM_001082476.1	Ndor1	NP_001075945.1	ILMN_1226135	001090673	S	2273	CAAGTCTCCTGAGCATTGGGAATGGGCAAATCTGTCTGTCTGCAGGTCCA	2	-	25102767-25102816	2qA3	Mus musculus NADPH dependent diflavin oxidoreductase 1 (Ndor1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	Ndor; 4930447P04Rik; NR1	Ndor; 4930447P04Rik; NR1
Mus musculus	RefSeq	ILMN_197055	ILMN_227337	LOC622602	XM_887041.2	XM_887041.2		622602	94364758	XM_887041.2	LOC622602	XP_892134.1	ILMN_1252426	002000114	S	12	CCAAGACATATTCTCTTTTTTGTACCGCAAGGCTCTCACCAGTCACACGG	1	-	193700372-193700421		PREDICTED: Mus musculus similar to TNF receptor-associated factor 5 (LOC622602), mRNA.					
Mus musculus	Riken	ILMN_203276	ILMN_203276	ZFP103	ri|9430023G20|PX00108I24|AK034677|1279					AK034677	Zfp103		ILMN_2556064	006650192	S	958	CTGGATGAGCGGTGGGGCTCCTGTGTTTGGAAACAGGTTCTGAAATTTCC										
Mus musculus	RefSeq	ILMN_223008	ILMN_223008	OLFR592	NM_207556.2	NM_207556.2		404317	121583632	NM_207556.2	Olfr592	NP_997439.2	ILMN_1235774	001170739	S	643	CTTATTGGCATCTCATATGGGTACATTCTTCGTGCTGTGTTTCGCCTCCC	7	+	110335759-110335808	7qE3	Mus musculus olfactory receptor 592 (Olfr592), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR32-13	MOR32-13
Mus musculus	RefSeq	ILMN_210866	ILMN_210866	FXYD6	NM_022004.6	NM_022004.6		59095	110671330	NM_022004.6	Fxyd6	NP_071287.1	ILMN_2609998	006550309	S	1709	GTACTGGGACTGCTGATCTCTGTCTTGTGATCTATATCCTCTGACAACAG	9	+	45204159-45204208	9qA5.2	Mus musculus FXYD domain-containing ion transport regulator 6 (Fxyd6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	0610030I18Rik; Php	0610030I18Rik; Php
Mus musculus	RefSeq	ILMN_222921	ILMN_222921	ERCC5	NM_011729.1	NM_011729.1		22592	6756022	NM_011729.1	Ercc5	NP_035859.1	ILMN_2769261	004260296	S	3621	GAGGATGATGAGGACAAAGCCAAGACTGTCCTAGTGACTGCTAGACCTGT	1	+	44237819-44237868	1qC1.1	Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 5 (Ercc5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IMP]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence ISO]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IDA]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]	Xpg	Xpg
Mus musculus	RefSeq	ILMN_222921	ILMN_222921	ERCC5	NM_011729.1	NM_011729.1		22592	6756022	NM_011729.1	Ercc5	NP_035859.1	ILMN_2984462	003390477	S	3539	AATCGGCTGCTCAGATGTGCCTGACTTAGTGAGAGACCCTCCTCATGGGA	1	+	44237737-44237786	1qC1.1	Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 5 (Ercc5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IMP]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence ISO]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IDA]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]	Xpg	Xpg
Mus musculus	RefSeq	ILMN_215394	ILMN_311501	LOC100045802	XM_001475744.1	XM_001475744.1		100045802	149261585	XM_001475744.1	LOC100045802	XP_001475794.1	ILMN_2757780	001990646	S	969	ACTGGGTGAGGGCTGCGGCGTCCAGAGAAGGAAGCGTTGACAGCTGGAAG					PREDICTED: Mus musculus hypothetical protein LOC100045802 (LOC100045802), mRNA.					
Mus musculus	MEEBO	ILMN_188299	ILMN_188299	E430026H10RIK	scl30189.1.132_38						E430026H10Rik		ILMN_2451486	000670487	S	20	CGTGGTCTTTGAGAGTCATCTATGTGTCTCATGTGTCAGTGGGTCTTCCA										
Mus musculus	Riken	ILMN_201946	ILMN_201946	PRDX4	ri|4833401P12|PX00027B13|AK014651|1010					AK014651	Prdx4		ILMN_1242073	003180433	S	710	TGGGATGTTGCTACCACAAGCCATAAATGAAAAAGCCAAGCCGATTTGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_220842	ILMN_220842	SNRPE	NM_009227.2	NM_009227.2		20643	141801910	NM_009227.2	Snrpe	NP_033253.1	ILMN_2727618	001690609	S	219	TAGATGATGCAGAAGAGATTCATTCTAAAACAAAGTCAAGAAAACAACTG	1	-	135503078-135503127	1qE4	Mus musculus small nuclear ribonucleoprotein E (Snrpe), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	C76690; AL022645; SME	C76690; AL022645; SME
Mus musculus	Riken	ILMN_202089	ILMN_202089	DNAJC1	ri|2700069B04|ZX00063J12|AK012505|990					AK012505	Dnajc1		ILMN_1246819	001090470	S	790	GTAAAAGCAACTGGTGAGTACTGGAGATCCATCAAATGGCCTAGCCTCCT						The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence TAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IDA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Modulates the activity of a molecular chaperone [goid 30188] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IDA]; Interacting selectively with any part of a ribosome [goid 43022] [evidence TAS]		
Mus musculus	RefSeq	ILMN_210148	ILMN_210148	TGFBR1	NM_009370.2	NM_009370.2		21812	40254607	NM_009370.2	Tgfbr1	NP_033396.1	ILMN_1214505	004640750	S	1700	GCACTATGGATACTTCTTCCAGACAGTTACAGAATGTTGTGTAGTCTACT	4	+	47423830-47423879	4qB1	Mus musculus transforming growth factor, beta receptor I (Tgfbr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone [goid 51491] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IMP]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IDA]	Alk-5; TbetaRI; ALK5; TbetaR-I; AU017191	Alk-5; TbetaRI; ALK5; TbetaR-I; AU017191
Mus musculus	RefSeq	ILMN_210148	ILMN_210148	TGFBR1	NM_009370.2	NM_009370.2		21812	40254607	NM_009370.2	Tgfbr1	NP_033396.1	ILMN_2602711	003850017	S	5400	GCAGTCCTTTAACCCTGTTGGTGTGATTGCTGCCCTTTCAGATATGTGCA	4	+	47427530-47427579	4qB1	Mus musculus transforming growth factor, beta receptor I (Tgfbr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone [goid 51491] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IMP]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IDA]	Alk-5; TbetaRI; ALK5; TbetaR-I; AU017191	Alk-5; TbetaRI; ALK5; TbetaR-I; AU017191
Mus musculus	RefSeq	ILMN_210148	ILMN_210148	TGFBR1	NM_009370.2	NM_009370.2		21812	40254607	NM_009370.2	Tgfbr1	NP_033396.1	ILMN_2980532	002810167	S	5483	GTTTTGAGAAACCTGTGAAGAGAGAAGCATAAACTGCATTTCCCCATCAG	4	+	47427613-47427662	4qB1	Mus musculus transforming growth factor, beta receptor I (Tgfbr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone [goid 51491] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IMP]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IDA]	Alk-5; TbetaRI; ALK5; TbetaR-I; AU017191	Alk-5; TbetaRI; ALK5; TbetaR-I; AU017191
Mus musculus	RefSeq	ILMN_210148	ILMN_210148	TGFBR1	NM_009370.2	NM_009370.2		21812	40254607	NM_009370.2	Tgfbr1	NP_033396.1	ILMN_2708965	003940184	S	2753	GGTAGAGTTAGTGGAGTTTTGAGGTCTCACTACCCTTTGAGGAAGGCAGC	4	+	47424883-47424932	4qB1	Mus musculus transforming growth factor, beta receptor I (Tgfbr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone [goid 51491] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IMP]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IDA]	Alk-5; TbetaRI; ALK5; TbetaR-I; AU017191	Alk-5; TbetaRI; ALK5; TbetaR-I; AU017191
Mus musculus	RefSeq	ILMN_237815	ILMN_237815	MARCH10	NM_001039242.1	NM_001039242.1		632687	85986646	NM_001039242.1	March10	NP_001034331.1	ILMN_3161404	000360767	S	1169	GCAGGGGGACAGGAAGAGGAGACAGCGCACTGACACTTCCCTTGATATGG	11	-	105263025-105263074	11qE1	Mus musculus membrane-associated ring finger (C3HC4) 10 (March10), mRNA.				MGC118297; 4933417C16Rik	MGC118297; 4933417C16Rik
Mus musculus	RefSeq	ILMN_233533	ILMN_233533	RNF10	NM_016698.1	NM_016698.1		50849	7710089	NM_016698.1	Rnf10	NP_057907.1	ILMN_2789888	000510341	S	2863	GCTGTTCAGCACCTCGGTCGTCCACACCAAGTGACACTATTGCCCAGGCG	5	-	115691977-115691993:115691994-115692026	5qF	Mus musculus ring finger protein 10 (Rnf10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0262; RIE2; AA675014; KIAA0262	mKIAA0262; RIE2; AA675014; KIAA0262
Mus musculus	Riken	ILMN_206732	ILMN_206732	TRRP4	ri|D230002D19|PX00187C01|AK084139|2979					AK084139	Trrp4		ILMN_1260411	007100730	S	2723	GGAACGTGCAGCTTTTTTAGGAAAACCTTCCAGGTGCGGCATGCTGTGAG										
Mus musculus	Riken	ILMN_206575	ILMN_206575	3202002H23RIK	ri|A730014C05|PX00149C04|AK080441|586					AK080441	3202002H23Rik		ILMN_1236031	002710689	S	454	AAGCTGTAGGCCTTGGCTTTGAGGAGACACAGACTGGACCCTGGCCCTGA										
Mus musculus	Riken	ILMN_205907	ILMN_205907	A830015G10RIK	ri|A830015G10|PX00154E16|AK043648|1355					AK043648	A830015G10Rik		ILMN_1256225	001070338	S	1140	GGTATCAGCTAACCTGCTCTACTATACTGGCTTAGTGGTCAGATTTCAGG										
Mus musculus	RefSeq	ILMN_232096	ILMN_232096	TNFAIP8L3	NM_001033535.1	NM_001033535.1		244882	75677624	NM_001033535.1	Tnfaip8l3	NP_001028707.1	ILMN_2784018	006860653	S	670	TATGGTCCGCATGGAAACTGCAGGCCCAATCTCAAGAGGATTTGCGAAGG	9	-	53825244-53825293	9qA5.3	Mus musculus tumor necrosis factor, alpha-induced protein 8-like 3 (Tnfaip8l3), mRNA.				Gm517; MGC141255; 9930029P06Rik	Gm517; MGC141255; 9930029P06Rik
Mus musculus	RefSeq	ILMN_238458	ILMN_238458	OLFR1249	NM_001011796.1	NM_001011796.1		257984	58801357	NM_001011796.1	Olfr1249	NP_001011796.1	ILMN_3160628	003060722	S	602	ATGGGGCAATGTGCATAGTCATCTTCACTCTCCTCCTACTCTCCTATGGG	2	-	89470402-89470451	2qE1	Mus musculus olfactory receptor 1249 (Olfr1249), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR231-17P	MOR231-17P
Mus musculus	RefSeq	ILMN_222217	ILMN_222217	PRIM2	NM_008922.1	NM_008922.1		19076	6679460	NM_008922.1	Prim2	NP_032948.1	ILMN_2982965	001190435	S	1608	CTCCCTAGACTCCTCCCTGGAAATGGACCTGGAGGGGCTGGAAGAGTACT	1	-	33510935-33510984	1qB	Mus musculus DNA primase, p58 subunit (Prim2), mRNA.	A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which catalyzes the synthesis of an RNA primer on the lagging strand of replicating DNA; the smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis [goid 5658] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of a short RNA polymer, usually 4-15 nucleotides long, using one strand of unwound DNA as a template; the RNA then serves as a primer from which DNA polymerases extend synthesis [goid 6269] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. Catalyzed by a DNA-directed RNA polymerase that forms a complex with alpha DNA polymerase [goid 3896] [evidence IEA]	AI323589	AI323589
Mus musculus	RefSeq	ILMN_222217	ILMN_222217	PRIM2	NM_008922.1	NM_008922.1		19076	6679460	NM_008922.1	Prim2	NP_032948.1	ILMN_2982969	002760692	S	1762	GGGAAGCAGGCTTGCTTCCACCTTACTTTTGACAGAATGGGAAAGGAAGC	1	-	33510781-33510830	1qB	Mus musculus DNA primase, p58 subunit (Prim2), mRNA.	A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which catalyzes the synthesis of an RNA primer on the lagging strand of replicating DNA; the smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis [goid 5658] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of a short RNA polymer, usually 4-15 nucleotides long, using one strand of unwound DNA as a template; the RNA then serves as a primer from which DNA polymerases extend synthesis [goid 6269] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. Catalyzed by a DNA-directed RNA polymerase that forms a complex with alpha DNA polymerase [goid 3896] [evidence IEA]	AI323589	AI323589
Mus musculus	MEEBO	ILMN_195488	ILMN_195488	ARL10A	scl44751.2_248				9910333	NM_019968	Arl10a		ILMN_2516032	004200066	S	20	GAAAGGGATCTAGCTGATGTCCCCAGAAACCAAAAGTTTTCTGCCAGCTG										
Mus musculus	RefSeq	ILMN_226115	ILMN_226115	1700019L03RIK	NM_025619.1	NM_025619.1		227736	113931145	NM_025619.1	1700019L03Rik	NP_079895.1	ILMN_2786075	007000008	S	1374	GCAGCAGCTCTCGACCATCACAACCTATAAGCCAGGGGATCTTGGGCTGG	2	-	32633442-32633491	2qB	Mus musculus RIKEN cDNA 1700019L03 gene (1700019L03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212448	ILMN_226115	1700019L03RIK	NM_025619.1	NM_025619.1		227736	113931145	NM_025619.1	1700019L03Rik	NP_079895.1	ILMN_1256787	001780703	S	1559	CCCTTCCTAGACCTTTCCTACACCGCAAATAGCGAACGGGGAGACCAAGC	2	-	32632999-32633017:32633018-32633048	2qB	Mus musculus RIKEN cDNA 1700019L03 gene (1700019L03Rik), mRNA.					
Mus musculus	MEEBO	ILMN_219963	ILMN_219963	DPM3	scl22977.3.91_193	XM_130951.1			20872932	XM_130951.1	Dpm3		ILMN_1248860	001740767	S	671	ATTTCACGACTGCGAGGACGCTGCCCGAGAGCTGCAGAGCCAGATCGTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]				
Mus musculus	RefSeq	ILMN_220542	ILMN_311363	A030003K21RIK	XM_001481231.1	XM_001481231.1		77913	149274629	XM_001481231.1	A030003K21Rik	XP_001481281.1	ILMN_2723481	003290431	S	752	GCTTCAAGAAGGACTCTTTCTTCCCCGTTCATTTCCTGTCTCTACACCTT				1qC5	PREDICTED: Mus musculus RIKEN cDNA A030003K21 gene (A030003K21Rik), mRNA.					
Mus musculus	MEEBO	ILMN_221206	ILMN_221206	DRBP1	scl0003137.1_53	NM_178090.2			31342549	NM_178090.2	Drbp1		ILMN_2732482	000380324	S	1613	CATTGCTTATCTGGGATCGCTGACATGTATTTTTGTCTGACCTTAATGGA										
Mus musculus	RefSeq	ILMN_212196	ILMN_212196	OSTM1	NM_172416.2	NM_172416.2		14628	29293830	NM_172416.2	Ostm1	NP_766004.1	ILMN_2623867	007200520	S	2553	CAGACGACGCTGTGATCCACTAGATGTGCCGGGGTTCATTGTGCTGTCAT	10	+	42421813-42421862	10qB2	Mus musculus osteopetrosis associated transmembrane protein 1 (Ostm1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1200002H13Rik; gl; AW123348; HSPC019	1200002H13Rik; gl; AW123348; HSPC019
Mus musculus	RefSeq	ILMN_239751	ILMN_239751	CAPG	NM_001042534.1	NM_001042534.1		12332	110227376	NM_001042534.1	Capg	NP_001035999.1	ILMN_3115281	003400082	A	949	CTACATCTGGAAGGGGAGAAAAGCTAATGAGAAAGAGCGGCAGGCAGCCC				6qC1	Mus musculus capping protein (actin filament), gelsolin-like (Capg), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	mbh1; gCap39	mbh1; gCap39
Mus musculus	RefSeq	ILMN_197232	ILMN_197232	LOC227934	XM_140912.2	XM_140912.2			38074692	XM_140912.2	LOC227934		ILMN_1244257	004260719	S	139	GTGGAATGGGTGCAGGGAGAAAAGGCTAATGGCACAACTGTCTATGTGGC										
Mus musculus	RefSeq	ILMN_211157	ILMN_211157	NEIL2	NM_201610.2	NM_201610.2		382913	118130802	NM_201610.2	Neil2	NP_963904.2	ILMN_2613131	002760524	S	1625	AGGGATCAAGGATGAGGGCAAAGCTTCAGGAAGGTAGTGCTAATCAGCCT	14	-	63801521-63801570	14qD1	Mus musculus nei like 2 (E. coli) (Neil2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Catalysis of the hydrolysis of any N-glycosyl bond [goid 16799] [evidence IEA]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]	NEH2; Gm1212	NEH2; Gm1212
Mus musculus	MEEBO	ILMN_191998	ILMN_191998	SCL0001684.1_10	scl0001684.1_10	BC052366.1			30432819	BC052366.1	scl0001684.1_10		ILMN_2484061	003120414	S	12	TCAAATGTCATTCAGAATGGCCTCCGCCACACCTTTGGAAACTCAGGCGG										
Mus musculus	RefSeq	ILMN_197211	ILMN_331075	1700101E01RIK	NM_001085514.1	NM_001085514.1		329375	148232193	NM_001085514.1	1700101E01Rik	NP_001078983.1	ILMN_1215612	000380333	S	226	CAGAACCCGCTCATCGTCAAGAGACACTGGCTGAAGAAACCTAACCCCAG				2qA3	Mus musculus RIKEN cDNA 1700101E01 gene (1700101E01Rik), mRNA.				Gm823	Gm823
Mus musculus	MEEBO	ILMN_187482	ILMN_187482	RAX	scl51841.2_441				7305432	NM_013833	Rax		ILMN_2753555	002900468	S	1431	AAAGAGGCCAAACGGAAATTCAGCCTCGCTGTCAGAGGGACAAACTGCGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of the hypothalamus region of the forebrain, from its initial formation to its mature state [goid 21854] [evidence IMP]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213032	ILMN_213032	ADAP1	NM_172723.4	NM_172723.4		231821	148368975	NM_172723.4	Adap1	NP_766311.2	ILMN_2632832	003440201	S	767	TCAATGCACTGCGAGCAGCCCGATTCCACTACCTGCAGGTGGCTTTCCCA				5qG2	Mus musculus ArfGAP with dual PH domains 1 (Adap1), mRNA.				4930431P11Rik; GC1L; p42IP4	4930431P11Rik; GC1L; p42IP4
Mus musculus	RefSeq	ILMN_213032	ILMN_213032	ADAP1	NM_172723.4	NM_172723.4		231821	148368975	NM_172723.4	Adap1	NP_766311.2	ILMN_1224713	000460731	S	2117	CCCCCAGCCCTGATTGCTGCTGGCAGGCCAGTAGTTAAAGCTACCTGTAT				5qG2	Mus musculus ArfGAP with dual PH domains 1 (Adap1), mRNA.				4930431P11Rik; GC1L; p42IP4	4930431P11Rik; GC1L; p42IP4
Mus musculus	RefSeq	ILMN_200342	ILMN_213032	ADAP1	NM_172723.4	NM_172723.4		231821	148368975	NM_172723.4	Adap1	NP_766311.2	ILMN_2538422	000160471	S	264	CAGCAAGGTGAAGTCAGTCCGTCTGGATGCCTGGGATGAGGCCCAAGTTG				5qG2	Mus musculus ArfGAP with dual PH domains 1 (Adap1), mRNA.				4930431P11Rik; GC1L; p42IP4	4930431P11Rik; GC1L; p42IP4
Mus musculus	MEEBO	ILMN_188619	ILMN_188619	VTI1A	scl52991.1.1_77				31980822	NM_016862	Vti1a		ILMN_2454230	006020382	S	7	GCAGAAGCGTTTCAGTCTCAATGTGATCAAGCTTGTGGCTGCTTCCATAC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]			
Mus musculus	RefSeq	ILMN_253975	ILMN_253975	OLFR776	NM_207559.1	NM_207559.1		404321	46430577	NM_207559.1	Olfr776	NP_997442.1	ILMN_2901432	003360678	S	343	GCCATGTCTTACGATCGCTATGTAGCCATCTGCAAACCACTGCACTATGT	10	+	128698361-128698410	10qD3	Mus musculus olfactory receptor 776 (Olfr776), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR111-12	MOR111-12
Mus musculus	RefSeq	ILMN_214592	ILMN_214592	GPD2	NM_010274.2	NM_010274.2		14571	31981768	NM_010274.2	Gpd2	NP_034404.2	ILMN_1215797	001570162	S	2522	GTACAACCAGAGATGACTTAAACTCTAAAATAGTGGATCTCGTAGCTGCC	2	+	57219947-57219996	2qC1.1	Mus musculus glycerol phosphate dehydrogenase 2, mitochondrial (Gpd2), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate [goid 9331] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 6072] [evidence IMP]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: sn-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor [goid 4368] [evidence IEA]	AW494132; AA408484; TISP38; GPDH; Gpd-m; Gdm1; Gpdh-m; AI448216; AU021455	AW494132; AA408484; TISP38; GPDH; Gpd-m; Gdm1; Gpdh-m; AI448216; AU021455
Mus musculus	RefSeq	ILMN_214592	ILMN_214592	GPD2	NM_010274.2	NM_010274.2		14571	31981768	NM_010274.2	Gpd2	NP_034404.2	ILMN_1247257	005360356	S	2389	CTTGCCATCCTGATGAAAACTGCCGAGGAGAACTTGGACCGCAGAGTTCC	2	+	57219814-57219863	2qC1.1	Mus musculus glycerol phosphate dehydrogenase 2, mitochondrial (Gpd2), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate [goid 9331] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 6072] [evidence IMP]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: sn-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor [goid 4368] [evidence IEA]	AW494132; AA408484; TISP38; GPDH; Gpd-m; Gdm1; Gpdh-m; AI448216; AU021455	AW494132; AA408484; TISP38; GPDH; Gpd-m; Gdm1; Gpdh-m; AI448216; AU021455
Mus musculus	RefSeq	ILMN_203389	ILMN_316473	ARID1B	NM_001085355.1	NM_001085355.1		239985	145553996	NM_001085355.1	Arid1b	NP_001078824.1	ILMN_1240420	002650356	S	7838	AAGTCATGCTCTGTTGGGAGAGCGGCTGATCCCAGTTTGCTTCATGAATC				17qA1	Mus musculus AT rich interactive domain 1B (SWI-like) (Arid1b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	8030481M12; mKIAA1235; Ardi1b; B230217J03Rik; 9330189K18Rik; AI836955	8030481M12; mKIAA1235; Ardi1b; B230217J03Rik; 9330189K18Rik; AI836955
Mus musculus	RefSeq	ILMN_191692	ILMN_316473	ARID1B	NM_001085355.1	NM_001085355.1		239985	145553996	NM_001085355.1	Arid1b	NP_001078824.1	ILMN_1244251	006650528	S	10913	GGAGGAGTTGCTGGGTGTGTAAGTCCTGCATCCCTTTGCCTGGTATGTGT				17qA1	Mus musculus AT rich interactive domain 1B (SWI-like) (Arid1b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	8030481M12; mKIAA1235; Ardi1b; B230217J03Rik; 9330189K18Rik; AI836955	8030481M12; mKIAA1235; Ardi1b; B230217J03Rik; 9330189K18Rik; AI836955
Mus musculus	RefSeq	ILMN_191692	ILMN_316473	ARID1B	NM_001085355.1	NM_001085355.1		239985	145553996	NM_001085355.1	Arid1b	NP_001078824.1	ILMN_1231417	000450435	S	6425	AGGGGGACACACTGGCGGCGAGGGCAATAGCTGTGCAGAAAGGAAGCATT				17qA1	Mus musculus AT rich interactive domain 1B (SWI-like) (Arid1b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	8030481M12; mKIAA1235; Ardi1b; B230217J03Rik; 9330189K18Rik; AI836955	8030481M12; mKIAA1235; Ardi1b; B230217J03Rik; 9330189K18Rik; AI836955
Mus musculus	RefSeq	ILMN_211961	ILMN_211961	DMXL2	XM_358382.5	XM_358382.5		235380	94386111	XM_358382.5	Dmxl2	XP_358382.5	ILMN_1228732	002100451	S	4948	GCAGACCAGGACACATCCTACAGAATTTCAGAGGACAGTACAAAAAAGCC	9	-	54263550-54263599	9qA5.3	PREDICTED: Mus musculus Dmx-like 2 (Dmxl2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence ISO]		
Mus musculus	RefSeq	ILMN_190102	ILMN_211961	DMXL2	XM_358382.5	XM_358382.5		235380	94386111	XM_358382.5	Dmxl2	XP_358382.5	ILMN_2467185	006960368	S	10876	AACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT	9	-	54213106-54213155	9qA5.3	PREDICTED: Mus musculus Dmx-like 2 (Dmxl2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence ISO]		
Mus musculus	RefSeq	ILMN_211961	ILMN_211961	DMXL2	XM_358382.5	XM_358382.5		235380	94386111	XM_358382.5	Dmxl2	XP_358382.5	ILMN_2621197	004150121	S	3187	CTGCACGTGTTTCAAGAAGACTTCATTATTGGATATAAGCCACACAAAGA	9	-	54274241-54274290	9qA5.3	PREDICTED: Mus musculus Dmx-like 2 (Dmxl2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence ISO]		
Mus musculus	RefSeq	ILMN_216359	ILMN_216359	ITGA5	NM_010577.2	NM_010577.2		16402	31560573	NM_010577.2	Itga5	NP_034707.2	ILMN_2670172	000020241	S	3861	CCAACAGCCCCCATCCTGGAAGGCCAATGAAGAACACTAACCGTGGATGG	15	-	103175188-103175237	15qF3	Mus musculus integrin alpha 5 (fibronectin receptor alpha) (Itga5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IDA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of one cell to another cell via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits [goid 33631] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an integrin [goid 5178] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cd49e; Fnra	Cd49e; Fnra
Mus musculus	RefSeq	ILMN_216359	ILMN_216359	ITGA5	NM_010577.2	NM_010577.2		16402	31560573	NM_010577.2	Itga5	NP_034707.2	ILMN_2849449	002070474	S	4011	GGGGCCTAGGGTTGATCTGGAGCCCAGTCTCGGATTCTAAGAACCTATGC	15	-	103175038-103175087	15qF3	Mus musculus integrin alpha 5 (fibronectin receptor alpha) (Itga5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IDA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of one cell to another cell via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits [goid 33631] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an integrin [goid 5178] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cd49e; Fnra	Cd49e; Fnra
Mus musculus	RefSeq	ILMN_212369	ILMN_212369	ARHGAP17	NM_144529.1	NM_144529.1		70497	21362322	NM_144529.1	Arhgap17	NP_653112.1	ILMN_2625634	003120528	S	777	AGAAAAGCATTAGCAGTCTTAGAAAAGGCCCTTCCCGAAATGCGCGCCCA	7	-	130451901-130451927:130457928-130457950	7qF3	Mus musculus Rho GTPase activating protein 17 (Arhgap17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence ISO]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence ISO]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730403H17Rik; Rich1; Nadrin; Wbp15	5730403H17Rik; Rich1; Nadrin; Wbp15
Mus musculus	RefSeq	ILMN_212369	ILMN_212369	ARHGAP17	NM_144529.1	NM_144529.1		70497	21362322	NM_144529.1	Arhgap17	NP_653112.1	ILMN_2715558	005420440	S	3171	GGCTCTGTCGCCTCAGCAGAATGGATGCAAGTCGTGCCTTGTGGATTGCC	7	-	130422896-130422945	7qF3	Mus musculus Rho GTPase activating protein 17 (Arhgap17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence ISO]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence ISO]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730403H17Rik; Rich1; Nadrin; Wbp15	5730403H17Rik; Rich1; Nadrin; Wbp15
Mus musculus	RefSeq	ILMN_212369	ILMN_212369	ARHGAP17	NM_144529.1	NM_144529.1		70497	21362322	NM_144529.1	Arhgap17	NP_653112.1	ILMN_1243446	006520162	S	1644	ACTCTAAATAGAAAGCACATAGCCCCCGCTTTCCAGCCGCCACTCCCGCC	7	-	130438092-130438141	7qF3	Mus musculus Rho GTPase activating protein 17 (Arhgap17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence ISO]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence ISO]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730403H17Rik; Rich1; Nadrin; Wbp15	5730403H17Rik; Rich1; Nadrin; Wbp15
Mus musculus	RefSeq	ILMN_258724	ILMN_258724	KRT42	NM_212483.1	NM_212483.1		68239	47679094	NM_212483.1	Krt42	NP_997648.1	ILMN_2877628	004120348	S	1459	CTGTGTTTGCTTTGTGCTGCCCCTTACAGAGAGGCCCCTTGGGTTGACCC	11	-	100124234-100124283	11qD	Mus musculus keratin 42 (Krt42), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Ka22; 2410039E07Rik; ecat6; K17n	Ka22; 2410039E07Rik; ecat6; K17n
Mus musculus	RefSeq	ILMN_184937	ILMN_184937	TNFRSF19L	NM_177073.3	NM_177073.3		320100	32129244	NM_177073.3	Tnfrsf19l	NP_796047.2	ILMN_2950644	006370376	S	2456	ATAAAAGGTGGAAAATGTCGTCATGAGGTGCTTCCTTTCCCCGTATCCTC	7	-	100720228-100720277	7qE3	Mus musculus tumor necrosis factor receptor superfamily, member 19-like (Tnfrsf19l), mRNA.				E430021K24Rik; RELT	E430021K24Rik; RELT
Mus musculus	MEEBO	ILMN_193512	ILMN_193512	2610301N02RIK	scl067159.2_136						2610301N02Rik		ILMN_2497877	000840224	S	4	TCAGGAGCAGGGTGAGCGCCGTCCTCCTAGTTCCCAAGTTATCCTTCCCT										
Mus musculus	RefSeq	ILMN_191248	ILMN_224738	LOC633353	XM_907744.2	XM_907744.2		633353	94411209	XM_907744.2	LOC633353	XP_912837.1	ILMN_2477462	004070605	S	339	AATCAACCTAGAAAAAGAAATGTAGTGGAGGTTAAAAATCTTTCTTCATC					PREDICTED: Mus musculus hypothetical LOC633353 (LOC633353), mRNA.					
Mus musculus	RefSeq	ILMN_214145	ILMN_214145	4921521F21RIK	NM_027582.1	NM_027582.1		70861	13386239	NM_027582.1	4921521F21Rik	NP_081858.1	ILMN_3009702	007160592	S	1422	CCATATAGACAAAAGAGAACATTCCTCCCAAGAGCCAGAGTTGAGGGTTG	1	-	64947121-64947170	1qC2	Mus musculus RIKEN cDNA 4921521F21 gene (4921521F21Rik), mRNA.				AI451536; AI503553	AI451536; AI503553
Mus musculus	Riken	ILMN_205601	ILMN_205601	B230334K19RIK	ri|B230334K19|PX00160F01|AK046026|3064					AK046026	B230334K19Rik		ILMN_2573810	004180373	S	2556	GGGGCAGTGTCGGAAATCAGGCCCAAAGATCTGCTTGCACTGCTGGTCCA										
Mus musculus	RefSeq	ILMN_212557	ILMN_212557	A430110N23RIK	NM_173008.2	NM_173008.2		269855	141802678	NM_173008.2	A430110N23Rik	NP_766596.1	ILMN_2627774	004050273	S	3862	GCTTCAGACCACCTCACTCAAGGGCCAACCCCTAATCACAACCCAGATCC	7	+	4896001-4896050	7qA1	Mus musculus RIKEN cDNA A430110N23 gene (A430110N23Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212857	ILMN_212857	NDST4	NM_022565.1	NM_022565.1		64580	12000418	NM_022565.1	Ndst4	NP_072087.1	ILMN_1236884	004010072	S	2486	CTCGGAAGCACTAACGTTTGATCCCCAGAAAGGATTTTGGTGTCAGCTAC	3	+	125417563-125417577:125425018-125425052	3qG1	Mus musculus N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4 (Ndst4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-desulfoheparin = adenosine 3',5'-bisphosphate + heparin [goid 15016] [evidence IEA]	4930439H17Rik	4930439H17Rik
Mus musculus	MEEBO	ILMN_190840	ILMN_190840	4933406P04RIK	scl38145.1.2_42						4933406P04Rik		ILMN_2473727	006840286	S	3	TTCGCTCATTAGATCCCCTGTGCTGGGCACTGAACCCGCAGAACCTGCCT										
Mus musculus	RefSeq	ILMN_219302	ILMN_219302	SEC24D	NM_027135.2	NM_027135.2		69608	46560564	NM_027135.2	Sec24d	NP_081411.2	ILMN_1243179	003850722	S	3379	GTCCATTACTGGCTGTCCAGCTTCTAATTTCTAAAGCTGACACAATTTGC	3	+	123068076-123068125	3qG1	Mus musculus Sec24 related gene family, member D (S. cerevisiae) (Sec24d), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		2310020L09Rik; Gm1349	2310020L09Rik; Gm1349
Mus musculus	RefSeq	ILMN_219241	ILMN_219241	2700097O09RIK	NM_028314.1	NM_028314.1		72658	21312237	NM_028314.1	2700097O09Rik	NP_082590.1	ILMN_1252210	003610435	S	999	GACCGTGTGCCAGTAACTAGTTCTGTGTGACTATGCATATGCAGTAGTCG	12	-	56146704-56146753	12qC1	Mus musculus RIKEN cDNA 2700097O09 gene (2700097O09Rik), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AW552125	AW552125
Mus musculus	RefSeq	ILMN_210626	ILMN_210626	GDAP1L1	NM_144891.1	NM_144891.1		228858	21450260	NM_144891.1	Gdap1l1	NP_659140.1	ILMN_2607543	006180195	S	646	CAGACCTCATGAAACTGGACCACGAGGAGGAACCACAGCTCTCTGAGCCC	2	+	163276323-163276372	2qH3	Mus musculus ganglioside-induced differentiation-associated protein 1-like 1 (Gdap1l1), mRNA.				Gdap1l; MGC28116	Gdap1l; MGC28116
Mus musculus	RefSeq	ILMN_210626	ILMN_210626	GDAP1L1	NM_144891.1	NM_144891.1		228858	21450260	NM_144891.1	Gdap1l1	NP_659140.1	ILMN_2989312	000270348	S	1111	CCTTCCTCATGGGCTCCTTGGGTGGGATGGGCTACTTTGCCTACTGGTAC	2	+	163279593-163279642	2qH3	Mus musculus ganglioside-induced differentiation-associated protein 1-like 1 (Gdap1l1), mRNA.				Gdap1l; MGC28116	Gdap1l; MGC28116
Mus musculus	RefSeq	ILMN_193924	ILMN_232641	CXCL9	NM_008599.3	NM_008599.3		17329	141801703	NM_008599.3	Cxcl9	NP_032625.2	ILMN_1215862	000010598	S	971	CCAGAGTTGGCCTTCAGAACCTCCCACGTAGCTTTCGAGACCATGGGATT	5	-	92752485-92752534	5qE2	Mus musculus chemokine (C-X-C motif) ligand 9 (Cxcl9), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	Scyb9; crg-10; BB139920; Mig; CMK	Scyb9; crg-10; BB139920; Mig; CMK
Mus musculus	Riken	ILMN_207379	ILMN_207379	C430017C20RIK	ri|C430017C20|PX00667N06|AK082914|3662					AK082914	C430017C20Rik		ILMN_1257909	003870022	S	3422	TGAGAAGCGTCAGAGCCCAGTCGGAGGAGGCACCGAAGAAGGGAGAGATA										
Mus musculus	RefSeq	ILMN_197930	ILMN_197930	LOC381039	XM_354953.1	XM_354953.1			38079721	XM_354953.1	LOC381039		ILMN_2529870	001090653	S	121	TCTGCCAGCCCTGAGCCAGGCCCAGGCTCCACCTGCAGTAGCGAGTCCCC										
Mus musculus	RefSeq	ILMN_201554	ILMN_201554	SNRPA	NM_015782.2	NM_015782.2			31980688	NM_015782.2	Snrpa		ILMN_1247582	002230647	S	159	AGCTCGCGGAAGGGAGAAGCCGTTGCCGGGGAAGATAGTTGTGTGTCTGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_224280	ILMN_239005	TMPRSS11D	NM_145561.2	NM_145561.2		231382	118130165	NM_145561.2	Tmprss11d	NP_663536.1	ILMN_1248712	005130192	S	1736	TTTCATTTTAAATATTTTATCTACATAGAAAAGACATATCTCCTTCATGA	5	-	86732139-86732188	5qE1	Mus musculus transmembrane protease, serine 11d (Tmprss11d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	AST; BC020151; AsP; MGC28382	AST; BC020151; AsP; MGC28382
Mus musculus	RefSeq	ILMN_215635	ILMN_236513	CCND3	NM_001081636.1	NM_001081636.1		12445	126012532	NM_001081636.1	Ccnd3	NP_001075105.1	ILMN_1246473	005900433	S	385	CGGCTGCTTGGGGACCAGCGTGTCCTGCAGAGTTTACTCCGCCTGGAGGA	17	+	47730661-47730710	17qC	Mus musculus cyclin D3 (Ccnd3), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IDA]	AA682053; AW146355; 9230106B05Rik; AL024085; C78795	AA682053; AW146355; 9230106B05Rik; AL024085; C78795
Mus musculus	RefSeq	ILMN_215635	ILMN_236513	CCND3	NM_001081636.1	NM_001081636.1		12445	126012532	NM_001081636.1	Ccnd3	NP_001075105.1	ILMN_2661849	002320050	S	1757	GGGTGCCGTGGTCATTTTAATTTATTGCTTTGAATACAACTGTAAGAGGG	17	+	47736276-47736325	17qC	Mus musculus cyclin D3 (Ccnd3), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IDA]	AA682053; AW146355; 9230106B05Rik; AL024085; C78795	AA682053; AW146355; 9230106B05Rik; AL024085; C78795
Mus musculus	Riken	ILMN_203092	ILMN_203092	3830430K15RIK	ri|3830430K15|PX00007B04|AK028375|954					AK028375	3830430K15Rik		ILMN_1245109	003890025	S	1	GTACTCTTCAACATGGATGCGGCCGAGGTGGAGTTTTTGGCCGAAAAGGA										
Mus musculus	RefSeq	ILMN_211151	ILMN_229533	CGA	NM_009889.2	NM_009889.2		12640	118129833	NM_009889.2	Cga	NP_034019.1	ILMN_2770220	005900458	S	426	GCCACTGTAGCACTTGCTACTACCACAAGTCGTAGCTTCTGAGCGCGCAG	4	+	34854358-34854392:34854393-34854407	4qA5	Mus musculus glycoprotein hormones, alpha subunit (Cga), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of either of the compounds secreted by the thyroid gland, mainly thyroxine and triiodothyronine. This is achieved by the iodination and joining of tyrosine molecules to form the precursor thyroglobin, proteolysis of this precursor gives rise to the thyroid hormones [goid 6590] [evidence IMP]; The regulated release of follicle-stimulating hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary [goid 46884] [evidence IMP]; The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones [goid 8406] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organ of an organism [goid 46621] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The regulated release of luteinizing hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary [goid 32275] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 32870] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	alphaGSU; FSHA; GPHalpha; LHA; HCG; Tsha; alphaSU; CG-alpha; aGSU; GPHA1; MGC107283; alpha-GSU	alphaGSU; FSHA; GPHalpha; LHA; HCG; Tsha; alphaSU; CG-alpha; aGSU; GPHA1; MGC107283; alpha-GSU
Mus musculus	RefSeq	ILMN_214005	ILMN_214005	RPRM	NM_023396.4	NM_023396.4		67874	142367811	NM_023396.4	Rprm	NP_075885.1	ILMN_2643212	006040064	S	1251	GCTTTCTTTTAGTGCATTTCCAGCTGGGTCTTTATGGGAGGCTAGCGCTC	2	-	53936663-53936712	2qC1.1	Mus musculus reprimo, TP53 dependent G2 arrest mediator candidate (Rprm), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Reprimo; 2410012A13Rik	Reprimo; 2410012A13Rik
Mus musculus	RefSeq	ILMN_253263	ILMN_253263	OLFR917	NM_001011864.1	NM_001011864.1		258183	58801489	NM_001011864.1	Olfr917	NP_001011864.1	ILMN_2930554	004570014	S	745	CTGTTCTTCGGCTCAGGTGCAATCAGGTATTTCAAACCCTCCTCAGATGG	9	-	38472633-38472682	9qA5.1	Mus musculus olfactory receptor 917 (Olfr917), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR168-2P	MOR168-2P
Mus musculus	RefSeq	ILMN_212422	ILMN_315133	LOC677205	XR_034818.1	XR_034818.1		677205	149255395	XR_034818.1	LOC677205		ILMN_1246999	001170438	S	1820	GCCTCAGGTTGCTCTGTCTTTTGGTTTTAAGGTCCCTCCTTTTGTTGATC	6	-	108513744-108513793	6qE2	PREDICTED: Mus musculus similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 (LOC677205), misc RNA.					
Mus musculus	RefSeq	ILMN_213669	ILMN_213669	OXR1	NM_130885.2	NM_130885.2		170719	118131049	NM_130885.2	Oxr1	NP_570955.1	ILMN_2639491	005220685	S	1845	GCAGGATCGATGCTCTAAATACTGAAGAACTGCGCACACTCTGCAGACGG	15	+	41680241-41680290	15qB3.1	Mus musculus oxidation resistance 1 (Oxr1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2210416C20Rik; MGC103081; MGC107466; C7B; C7	2210416C20Rik; MGC103081; MGC107466; C7B; C7
Mus musculus	RefSeq	ILMN_213669	ILMN_213669	OXR1	NM_130885.2	NM_130885.2		170719	118131049	NM_130885.2	Oxr1	NP_570955.1	ILMN_2697390	002940739	S	3968	CACGCTGTTGCTAAAGATGAATAGAAACGGCATCGTTTCCTCGTCTGTGT	15	+	41692322-41692371	15qB3.1	Mus musculus oxidation resistance 1 (Oxr1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2210416C20Rik; MGC103081; MGC107466; C7B; C7	2210416C20Rik; MGC103081; MGC107466; C7B; C7
Mus musculus	Riken	ILMN_202676	ILMN_202676	CSND	ri|D730045B19|PX00091O05|AK021343|844					AK021343	Csnd		ILMN_1216296	003390754	S	613	GGGTTTACTGACCTCATCCATCCTGTGGTCTGGAGAACATTGCCATGGGC										
Mus musculus	RefSeq	ILMN_208618	ILMN_255390	EIF4A2	NM_013506.1	NM_013506.1		13682	7305018	NM_013506.1	Eif4a2	NP_038534.1	ILMN_2696566	000780156	S	1519	TTTACTAGTTATGTAGAAATGGTTGTATTAGATGTTCTCTATCATTTAAT	16	+	23113643-23113692	16qB1	Mus musculus eukaryotic translation initiation factor 4A2 (Eif4a2), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	Eif4; BM-010; 4833432N07Rik; Ddx2b	Eif4; BM-010; 4833432N07Rik; Ddx2b
Mus musculus	RefSeq	ILMN_255390	ILMN_255390	EIF4A2	NM_013506.1	NM_013506.1		13682	7305018	NM_013506.1	Eif4a2	NP_038534.1	ILMN_2976829	007050300	S	1766	GTGAACTGGACCCTGTTGCTAAGCCTCAGCAAGCAATCATCCTAGGTAGG	16	+	23113890-23113939	16qB1	Mus musculus eukaryotic translation initiation factor 4A2 (Eif4a2), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	Eif4; BM-010; 4833432N07Rik; Ddx2b	Eif4; BM-010; 4833432N07Rik; Ddx2b
Mus musculus	RefSeq	ILMN_218941	ILMN_255390	EIF4A2	NM_013506.1	NM_013506.1		13682	7305018	NM_013506.1	Eif4a2	NP_038534.1	ILMN_2702215	004850747	S	264	AGCTCAGTCAGGTACTGGCAAGACAGCCACATTTGCTATTTCCATCCTGC	16	+	23109212-23109261	16qB1	Mus musculus eukaryotic translation initiation factor 4A2 (Eif4a2), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	Eif4; BM-010; 4833432N07Rik; Ddx2b	Eif4; BM-010; 4833432N07Rik; Ddx2b
Mus musculus	RefSeq	ILMN_216342	ILMN_216342	BCAS3	NM_138681.3	NM_138681.3		192197	141801917	NM_138681.3	Bcas3	NP_619622.2	ILMN_2669958	002710709	S	3531	GAAGGGAAGTGCAGTTACCGAGGCCGTGTCAAAAGTGCACGTCTTGTCCA	11	+	85639485-85639534	11qC	Mus musculus breast carcinoma amplified sequence 3 (Bcas3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			rudhira; 2610028P08Rik; BC028339; K20D4; AU021018; 1500019F07Rik	rudhira; 2610028P08Rik; BC028339; K20D4; AU021018; 1500019F07Rik
Mus musculus	MEEBO	ILMN_218426	ILMN_218426	OLFR654	scl32253.1.52_233				22129542	NM_146379	Olfr654		ILMN_2695724	001580603	S	864	CATGTCCACACTATTCTTGGCAACCTTTACTTCCTTGTACCACCAATGCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191651	ILMN_246452	NRP2	NM_001077404.1	NM_001077404.1		18187	116686139	NM_001077404.1	Nrp2	NP_001070872.1	ILMN_2480957	007380019	S	6344	CCCTTTGGGAAATCTAATTCACAGTATTGATCTCCTTTTTTGCCTTGTAC	1	+	62864886-62864935	1qC2	Mus musculus neuropilin 2 (Nrp2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 17154] [evidence IPI]	Np2; Np-2; Npn-2; Npn2; 1110048P06Rik	Np2; Np-2; Npn-2; Npn2; 1110048P06Rik
Mus musculus	RefSeq	ILMN_215901	ILMN_246452	NRP2	NM_001077404.1	NM_001077404.1		18187	116686139	NM_001077404.1	Nrp2	NP_001070872.1	ILMN_2730813	005670202	S	3608	TCTACGATGGCCTCAAGCACAAGGTCAAGATCAATCATCAGAAGTGCTGC	1	+	62862150-62862199	1qC2	Mus musculus neuropilin 2 (Nrp2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 17154] [evidence IPI]	Np2; Np-2; Npn-2; Npn2; 1110048P06Rik	Np2; Np-2; Npn-2; Npn2; 1110048P06Rik
Mus musculus	RefSeq	ILMN_215901	ILMN_246452	NRP2	NM_001077404.1	NM_001077404.1		18187	116686139	NM_001077404.1	Nrp2	NP_001070872.1	ILMN_2766737	006480095	S	3808	AAGGTATGGACAGGACAGACAGGCCAGTCTAGGGAGAAAGGGAGATGCAG	1	+	62862350-62862399	1qC2	Mus musculus neuropilin 2 (Nrp2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 17154] [evidence IPI]	Np2; Np-2; Npn-2; Npn2; 1110048P06Rik	Np2; Np-2; Npn-2; Npn2; 1110048P06Rik
Mus musculus	RefSeq	ILMN_197896	ILMN_197896	LOC329950	XM_287382.1	XM_287382.1			28498266	XM_287382.1	LOC329950		ILMN_2529743	004570048	S	307	CTAGAGAAGGCTACCTGAGAGGACTCCTGGGAGGATTGGCTACACAGCCG										
Mus musculus	RefSeq	ILMN_222008	ILMN_222008	CCL3	NM_011337.2	NM_011337.2		20302	126432552	NM_011337.2	Ccl3	NP_035467.1	ILMN_1253919	002760047	S	314	GATCTGCGCTGACTCCAAAGAGACCTGGGTCCAAGAATACATCACTGACC	11	-	83461771-83461820	11qC	Mus musculus chemokine (C-C motif) ligand 3 (Ccl3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	LD78alpha; Scya3; Mip1a; AI323804; MIP1-alpha; MIP1-(a); MIP-1alpha; G0S19-1	LD78alpha; Scya3; Mip1a; AI323804; MIP1-alpha; MIP1-(a); MIP-1alpha; G0S19-1
Mus musculus	RefSeq	ILMN_210574	ILMN_210574	BTN1A1	NM_013483.2	NM_013483.2		12231	76253943	NM_013483.2	Btn1a1	NP_038511.1	ILMN_2607009	002100722	S	3789	TGAGCCATTTGCTCAATGTAGCCTACCCAGGTATCCTGCTTTCTGGTCCC	13	-	23549037-23549086	13qA3.1	Mus musculus butyrophilin, subfamily 1, member A1 (Btn1a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Btn	Btn
Mus musculus	RefSeq	ILMN_237203	ILMN_237203	DCP1B	NM_001033379.1	NM_001033379.1		319618	84370028	NM_001033379.1	Dcp1b	NP_001028551.1	ILMN_3062378	006580044	I	1810	GATCTTCCAGGTTCTTCATGTGAACTGGTGTGACCAAACACACTTATGCC	6	+	119185732-119185781	6qF1	Mus musculus DCP1 decapping enzyme homolog b (S. cerevisiae) (Dcp1b), mRNA. XM_900830 XM_900833 XM_917383	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B930050E02Rik	B930050E02Rik
Mus musculus	RefSeq	ILMN_237203	ILMN_237203	DCP1B	NM_001033379.1	NM_001033379.1		319618	84370028	NM_001033379.1	Dcp1b	NP_001028551.1	ILMN_3139994	004670520	A	1527	TACCTGTGCCCCACTGAGGGAGACTGATAATGGGCTCATGGCCCTAGGAG	6	+	119183426-119183475	6qF1	Mus musculus DCP1 decapping enzyme homolog b (S. cerevisiae) (Dcp1b), mRNA. XM_900830 XM_900833 XM_917383	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B930050E02Rik	B930050E02Rik
Mus musculus	RefSeq	ILMN_201202	ILMN_201202	LOC384929	XM_357943.1	XM_357943.1			38089786	XM_357943.1	LOC384929		ILMN_1216123	001980402	S	13	CATGATGCCAGTGACTGGAAGGTCCACACAGTGTGTGCCTGCTGCATCCT										
Mus musculus	MEEBO	ILMN_214579	ILMN_214579	2310036D04RIK	scl069598.1_26				51765725	XM_488563	2310036D04Rik		ILMN_2649478	006620735	S	3053	GCTGCCCATTCCTGACACACAGCCTGTCAGAACTTCAGCCGTGTGTTGAG										
Mus musculus	MEEBO	ILMN_187433	ILMN_187433	TOMM22	scl47742.5_273				31982090	NM_172609	Tomm22		ILMN_2444077	002350010	S	2	GCCTCAAATTCAAGACTCCCTCCACAGAAAGTGCAGGCCAGACTCTGGAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196333	ILMN_196333	8430403M15RIK	NM_175314.2	NM_175314.2			31341582	NM_175314.2	8430403M15Rik		ILMN_1254543	004560465	S	1914	CAGCTGCTGGCTTTTCCAGTTTCCAGAAAATCCGACTCGACCTGACCAGC										
Mus musculus	RefSeq	ILMN_201236	ILMN_201236	LOC384966	XM_357966.1	XM_357966.1			38090029	XM_357966.1	LOC384966		ILMN_1231442	001710010	S	238	GGAGTTTGTCCTCGGTGCAGGAAGGGCAACCGTTGGGCTATGAAACCAGA										
Mus musculus	RefSeq	ILMN_258297	ILMN_258297	SMG6	NM_001002764.1	NM_001002764.1		103677	50582544	NM_001002764.1	Smg6	NP_001002764.1	ILMN_3160556	001990368	S	5560	AGTGCTTCACCAAGGGTGCTCTGCCCTTCTCAGGCCCAGGACAGTGCCCA	11	+	74977711-74977760	11qB5	Mus musculus Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) (Smg6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI317223; RP23-143A14.6; AU041178; MGC7717	AI317223; RP23-143A14.6; AU041178; MGC7717
Mus musculus	RefSeq	ILMN_213106	ILMN_213106	NEK11	NM_172461.1	NM_172461.1		208583	27369620	NM_172461.1	Nek11	NP_766049.1	ILMN_2774993	005080544	S	1827	TGGAAACGTTTGAGGAGGTCTACGATTACCTCAAGAGAGCAAGGCACCAG	9	-	105021271-105021320	9qF1	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 11 (Nek11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	4932416N14Rik	4932416N14Rik
Mus musculus	RefSeq	ILMN_213106	ILMN_213106	NEK11	NM_172461.1	NM_172461.1		208583	27369620	NM_172461.1	Nek11	NP_766049.1	ILMN_2886207	005910020	S	2323	CAGTGCCTGACCAGTGTGAGCTCCAGGGACTATGGCTAGCTGGCTTGTGA	9	-	105020775-105020824	9qF1	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 11 (Nek11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	4932416N14Rik	4932416N14Rik
Mus musculus	RefSeq	ILMN_223929	ILMN_240428	PPARGC1B	NM_133249.2	NM_133249.2		170826	118131021	NM_133249.2	Ppargc1b	NP_573512.1	ILMN_2771709	006860138	S	3391	TTGATGTTCCACTGCCACGTTAGCGTCGTCCTCGCTTCCAGCGGATCGTC	18	-	61458005-61458054	18qE1	Mus musculus peroxisome proliferative activated receptor, gamma, coactivator 1 beta (Ppargc1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4631412G21Rik; Perc	4631412G21Rik; Perc
Mus musculus	RefSeq	ILMN_220371	ILMN_220371	DLL1	NM_007865.2	NM_007865.2		13388	40789271	NM_007865.2	Dll1	NP_031891.2	ILMN_2721188	000240400	S	2304	ACGGTCAGGGATACACACAGCAAACGTGACACCAAGTGCCAGTCACAGAG	17	-	15505369-15505418	17qA2	Mus musculus delta-like 1 (Drosophila) (Dll1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of auditory hair cell differentiation [goid 45608] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence NAS]; The process by which the cellular identity of auditory hair cells is acquired and determined [goid 9912] [evidence NAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence NAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence NAS]; The regionalization process by which embryonic segments are divided into compartments that will result in differences in cell differentiation [goid 7386] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The process by which individual somites establish identity during embryogenesis [goid 1757] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [evidence IPI]	Delta1	Delta1
Mus musculus	RefSeq	ILMN_230544	ILMN_230544	RTP1	NM_001004151.1	NM_001004151.1		239766	51921304	NM_001004151.1	Rtp1	NP_001004151.1	ILMN_2855737	002600307	S	2818	CCTTGCTAGAATGCCTACACATCTGACCCGCTGTAATCTCTTAGTATCGG	16	+	23348992-23349041	16qB1	Mus musculus receptor transporter protein 1 (Rtp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gm604; Gm1766	Gm604; Gm1766
Mus musculus	RefSeq	ILMN_213009	ILMN_239833	MARVELD3	NM_212447.1	NM_212447.1		73608	47059064	NM_212447.1	Marveld3	NP_997612.1	ILMN_2711608	000010070	S	291	ATCGCGCATCCGAACAAAGAGCCTTGGAGAAGTCCCGTCAAAGCCGTGCG	8	-	112485728-112485777	8qD3	Mus musculus MARVEL (membrane-associating) domain containing 3 (Marveld3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI642133; Mrvldc3; MARVD3; 1810006A16Rik	AI642133; Mrvldc3; MARVD3; 1810006A16Rik
Mus musculus	RefSeq	ILMN_219845	ILMN_219845	NPY	NM_023456.2	NM_023456.2		109648	27754168	NM_023456.2	Npy	NP_075945.1	ILMN_2946520	000160494	S	431	GAAACCAGTCTGCCTGTCCCACCAATGCATGCCACCACTAGGCTGGACTC	6	+	49779390-49779439	6qB2.3	Mus musculus neuropeptide Y (Npy), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with a G-protein-coupled receptor [goid 1664] [evidence IDA]; Interacting selectively with a G-protein-coupled receptor [goid 1664] [evidence IGI]	0710005A05Rik	0710005A05Rik
Mus musculus	RefSeq	ILMN_216767	ILMN_216767	4930526H21RIK	XM_205565.5	XM_205565.5		75136	94375815	XM_205565.5	4930526H21Rik	XP_205565.4	ILMN_2675144	006130349	S	386	GTGGACTGTATGAGGGAGAAGGCTTTGCTGTCTTTCAAGGCGGAAACACC	5	+	144699809-144699858	5qG2	PREDICTED: Mus musculus RIKEN cDNA 4930526H21 gene, transcript variant 1 (4930526H21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199283	ILMN_199283	LOC236435	XM_142976.2	XM_142976.2			38093900	XM_142976.2	LOC236435		ILMN_2534695	003520279	S	1511	CAGGACAGAAGTCTTACTAATTTAATGAATGTGACAAACGGATCTAACCT										
Mus musculus	RefSeq	ILMN_235090	ILMN_235090	D6ERTD474E	NM_001033129.1	NM_001033129.1		52285	85701591	NM_001033129.1	D6Ertd474e	NP_001028301.1	ILMN_2866941	001240477	S	1920	GGCCTGATTCTGCTGGGACTAAGGCCACTAAACCTGGCGACAGTGAAAAC	6	+	143254265-143254314	6qG3	Mus musculus DNA segment, Chr 6, ERATO Doi 474, expressed (D6Ertd474e), mRNA.				AU023129; 1700001I24Rik	AU023129; 1700001I24Rik
Mus musculus	RefSeq	ILMN_218644	ILMN_218644	NOX4	NM_015760.4	NM_015760.4		50490	146134358	NM_015760.4	Nox4	NP_056575.1	ILMN_2698499	003130066	S	3110	CCCTCCTATGGGCAATGTGCAATGCTCATGTAGACTGAACTGTGGAGACA				7qD3	Mus musculus NADPH oxidase 4 (Nox4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whereby a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual [goid 35051] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IMP]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	AI648021	AI648021
Mus musculus	RefSeq	ILMN_217302	ILMN_314701	1700009J07RIK	XR_035305.1	XR_035305.1		75188	149260994	XR_035305.1	1700009J07Rik		ILMN_1231550	006270471	S	552	CAGTCAACAATGACCACAGAACCACAGTCAGCAGTGGAAACCTGACGTCC	10	+	77356716-77356765	10qC1	PREDICTED: Mus musculus RIKEN cDNA 1700009J07 gene (1700009J07Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_184700	ILMN_244344	BRWD1	NM_145125.2	NM_145125.2		93871	142388946	NM_145125.2	Brwd1	NP_660107.1	ILMN_2421220	006550349	S	7824	GGCCTCTGGTCGTTGTGCTACAAATGTTTTGCCTACAGAGGATGTGGACT	16	-	96214370-96214419	16qC4	Mus musculus bromodomain and WD repeat domain containing 1 (Brwd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D530019K20Rik; Wdr9; 5330419I02Rik	D530019K20Rik; Wdr9; 5330419I02Rik
Mus musculus	RefSeq	ILMN_184700	ILMN_244344	BRWD1	NM_145125.2	NM_145125.2		93871	142388946	NM_145125.2	Brwd1	NP_660107.1	ILMN_1227839	003850754	S	2780	GTCGTCGTCGAGTAACTCGATTCTGCAGTACTTCAGAGGACGAAATGTCC	16	-	96257532-96257581	16qC4	Mus musculus bromodomain and WD repeat domain containing 1 (Brwd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D530019K20Rik; Wdr9; 5330419I02Rik	D530019K20Rik; Wdr9; 5330419I02Rik
Mus musculus	RefSeq	ILMN_210453	ILMN_224785	REPIN1	NM_001079904.1	NM_001079904.1		58887	120953071	NM_001079904.1	Repin1	NP_001073373.1	ILMN_2605767	002490541	S	2691	CCTAAGTATAGGCCTTCCTGGTGGTTTTGTTTAACCCCATGACCCTCCCC	6	+	48548700-48548749	6qB2.3	Mus musculus replication initiator 1 (Repin1), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI425994; Zfp464; E430037F08Rik; AP4; MGC19105	AI425994; Zfp464; E430037F08Rik; AP4; MGC19105
Mus musculus	RefSeq	ILMN_216231	ILMN_238975	1700011F14RIK	NM_029372.2	NM_029372.2		75645	114205447	NM_029372.2	1700011F14Rik	NP_083648.1	ILMN_1249784	003390017	S	937	GTGGAGCCTGTAGAGCTGATCTCTACGTGAACATGAGGATCAGGCAGTGC	19	+	58627426-58627475	19qD2	Mus musculus RIKEN cDNA 1700011F14 gene (1700011F14Rik), mRNA.				MGC58650	MGC58650
Mus musculus	RefSeq	ILMN_199171	ILMN_199171	LOC216605	XM_137478.3	XM_137478.3			38091579	XM_137478.3	LOC216605		ILMN_1256144	004780632	S	1143	TGTCATCCAATTAGTGGACTCTAGCAGGGAAGTTGCTGGGGTAGACGGCC										
Mus musculus	RefSeq	ILMN_222807	ILMN_222807	AGPAT4	NM_026644.1	NM_026644.1		68262	21313141	NM_026644.1	Agpat4	NP_080920.2	ILMN_2960714	007570315	S	1680	GGGTGAGGAGAATGGGTGTGTGGTTGCGTGTGCACTTGTGACCCTGTAAC	17	+	12062768-12062817	17qA1	Mus musculus 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) (Agpat4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IEA]	1500003P24Rik	1500003P24Rik
Mus musculus	Riken	ILMN_205605	ILMN_205605	B930097H17RIK	ri|B930097H17|PX00166B11|AK047602|1934					AK047602	B930097H17Rik		ILMN_2573844	007160315	S	1618	CTGCAGATGACATTTTGAGATTGTCCGACCCTGCGGAGTGCCTCTGAAGC										
Mus musculus	RefSeq	ILMN_261727	ILMN_314403	PPM2C	NM_001098231.1	NM_001098231.1		381511	148277649	NM_001098231.1	Ppm2c	NP_001091701.1	ILMN_3162452	002940487	S	1558	GTGTTTGAGGATCAGAATGCAGCAACCCATCTCATTCGCCATGCTGTAGG				4qA1	Mus musculus protein phosphatase 2C, magnesium dependent, catalytic subunit (Ppm2c), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the reaction: [pyruvate dehydrogenase (lipoamide)] phosphate + H2O = [pyruvate dehydrogenase (lipoamide)] + phosphate [goid 4741] [evidence IEA]	RP23-203A12.1; Gm1024	RP23-203A12.1; Gm1024
Mus musculus	RefSeq	ILMN_191924	ILMN_314403	PPM2C	NM_001098231.1	NM_001098231.1		381511	148277649	NM_001098231.1	Ppm2c	NP_001091701.1	ILMN_1220173	000650253	S	23	CGCGCGGGTTGTGGATGTTGTCGGCTCCGTGTTGTGATGACAGGAGAATG				4qA1	Mus musculus protein phosphatase 2C, magnesium dependent, catalytic subunit (Ppm2c), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the reaction: [pyruvate dehydrogenase (lipoamide)] phosphate + H2O = [pyruvate dehydrogenase (lipoamide)] + phosphate [goid 4741] [evidence IEA]	RP23-203A12.1; Gm1024	RP23-203A12.1; Gm1024
Mus musculus	RefSeq	ILMN_203100	ILMN_239559	PCP4L1	XM_484933.5	XM_484933.5		66425	149245310	XM_484933.5	Pcp4l1	XP_484933.5	ILMN_1218127	002100609	S	909	CAGCTGCACTTTCTCCCGGGCTGACCTAAATCCAGGAGCTTGCAAAATGT	1	-	173104041-173104090	1qH3	PREDICTED: Mus musculus Purkinje cell protein 4-like 1 (Pcp4l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_213857	ILMN_239559	PCP4L1	XM_484933.5	XM_484933.5		66425	149245310	XM_484933.5	Pcp4l1	XP_484933.5	ILMN_1254622	005080392	S	1381	TAACCTAATACTCCACGAGGGGCTCTCTGGCCTTTGCTAACCTGCCTACC	1	-	173103569-173103618	1qH3	PREDICTED: Mus musculus Purkinje cell protein 4-like 1 (Pcp4l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_223830	ILMN_223830	GGT1	scl38761.18.1_172				6679994	NM_008116	Ggt1		ILMN_2770085	003130541	S	1939	GGAGAACATGCCGCCTCTGGGTGGGACAGAGGGAGCGCAATAAATGGAGG						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence TAS]		
Mus musculus	Riken	ILMN_205714	ILMN_205714	3010001K23RIK	ri|C630020A22|PX00084E03|AK049952|1687					AK049952	3010001K23Rik		ILMN_1236468	003870546	S	1392	GAAGAGATAACATACCAGCTGAGTGGGTAGGACCCAGGGAACCCAGAGAC										
Mus musculus	RefSeq	ILMN_218223	ILMN_218223	CRYGE	NM_007777.3	NM_007777.3		12968	134288885	NM_007777.3	Cryge	NP_031803.3	ILMN_2693134	006130639	S	570	TATTGAAATATTTTTACTCTACCATTTTCTCCATCTGGACAGTAATAAAA	1	-	65095153-65095197:65095198-65095202	1qC2	Mus musculus crystallin, gamma E (Cryge), mRNA.		The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]	DGcry-2; Elo; Cryg-6; MGC90717; Cryg-2	DGcry-2; Elo; Cryg-6; MGC90717; Cryg-2
Mus musculus	RefSeq	ILMN_220238	ILMN_220238	STK38	NM_134115.2	NM_134115.2		106504	118129944	NM_134115.2	Stk38	NP_598876.1	ILMN_2719522	001400278	S	2992	CATGTCTTAGATGAAGAAAAAGGAATGTTAGGGAAGTCTTAACTCTGGGT	17	-	29118909-29118958	17qA3.3	Mus musculus serine/threonine kinase 38 (Stk38), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Ndr1; 5830476G13Rik; 9530097A09Rik; AA617404	Ndr1; 5830476G13Rik; 9530097A09Rik; AA617404
Mus musculus	RefSeq	ILMN_217645	ILMN_217645	OLFR1445	NM_146699.1	NM_146699.1		258694	22129442	NM_146699.1	Olfr1445	NP_666910.1	ILMN_2685864	004730270	S	600	GGTGGGTTTCAATGATATCTTCTCTATTGTGGTCATCCCGATATCCTATC	19	+	12958972-12959021	19qA	Mus musculus olfactory receptor 1445 (Olfr1445), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-7	MOR202-7
Mus musculus	RefSeq	ILMN_223437	ILMN_223437	PRPF18	NM_026045.3	NM_026045.3		67229	41053869	NM_026045.3	Prpf18	NP_080321.2	ILMN_2835346	007610692	S	3158	TCGTATTCTCCAGGACTGGGACTGTGGCCATTCTGAAGCTGGGTGGAGAG	2	-	4543418-4543467	2qA1	Mus musculus PRP18 pre-mRNA processing factor 18 homolog (yeast) (Prpf18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		2810441A10Rik	2810441A10Rik
Mus musculus	RefSeq	ILMN_193321	ILMN_225614	CABLES2	NM_145851.2	NM_145851.2		252966	124053454	NM_145851.2	Cables2	NP_665850.2	ILMN_1220084	006270554	S	1575	GAAAGTTTTTAATTTTGGGGCAGAGCACGCCTTGACCTCGAGACGCTCCC	2	-	179994564-179994613	2qH4	Mus musculus CDK5 and Abl enzyme substrate 2 (Cables2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells [goid 51302] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ik3-2	ik3-2
Mus musculus	RefSeq	ILMN_193321	ILMN_225614	CABLES2	NM_145851.2	NM_145851.2		252966	124053454	NM_145851.2	Cables2	NP_665850.2	ILMN_2496113	001240139	S	2368	CACCGACCACCTAGGTCTATCGGATCAGTAACAGCTCAGACAGGAGCTCA	2	-	179993771-179993820	2qH4	Mus musculus CDK5 and Abl enzyme substrate 2 (Cables2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells [goid 51302] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ik3-2	ik3-2
Mus musculus	RefSeq	ILMN_198105	ILMN_312714	EG631624	XR_033816.1	XR_033816.1		631624	149268622	XR_033816.1	EG631624		ILMN_1245206	004480072	S	1382	CTACACTCGAAAAAGCCATCTTATTGTTCATCAGAAAATTCATGCTGGAG	17	-	22424395-22424444	17qA3.3	PREDICTED: Mus musculus predicted gene, EG631624 (EG631624), misc RNA.					
Mus musculus	RefSeq	ILMN_226036	ILMN_226036	L1TD1	NM_001081202.1	NM_001081202.1		381591	124487094	NM_001081202.1	L1td1	NP_001074671.1	ILMN_2961042	006980577	S	2751	GTAGCTATCTACCTTGGTAAGGAGGAATCTTGTCAGTGTGACCACACACG	4	+	98404986-98405035	4qC6	Mus musculus LINE-1 type transposase domain containing 1 (L1td1), mRNA.				AB211064; ECAT11; AA546746; D76865	AB211064; ECAT11; AA546746; D76865
Mus musculus	RefSeq	ILMN_199949	ILMN_226036	L1TD1	NM_001081202.1	NM_001081202.1		381591	124487094	NM_001081202.1	L1td1	NP_001074671.1	ILMN_1260018	001980240	S	1941	CCTTAGCTTGCACGATTGAGGCCAGGGTGAGCGAACAGGAAGATGCCGTG	4	+	98404176-98404225	4qC6	Mus musculus LINE-1 type transposase domain containing 1 (L1td1), mRNA.				AB211064; ECAT11; AA546746; D76865	AB211064; ECAT11; AA546746; D76865
Mus musculus	RefSeq	ILMN_194193	ILMN_225260	PLA2G4E	NM_177845.4	NM_177845.4		329502	85861233	NM_177845.4	Pla2g4e	NP_808513.2	ILMN_2774916	007400471	S	1961	GTGCAGGGGACAGAACCCTCTGCCCATCTACCTCACCATCAATGTCAAGG	2	-	120000015-120000064	2qE5	Mus musculus phospholipase A2, group IVE (Pla2g4e), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a glycerophospholipid [goid 4620] [evidence IEA]	Pla2epsilon; 2310026J01Rik; C230096D22	Pla2epsilon; 2310026J01Rik; C230096D22
Mus musculus	MEEBO	ILMN_216243	ILMN_216243	GAD2	scl21217.17.1_28	NM_008078.1			6679924	NM_008078.1	Gad2		ILMN_2668908	005220242	S	2173	TAAATGTATTTGTAGTTTGTTCCAGAATAATTCTATTTCTATATCGTGGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2 [goid 4351] [evidence IEA]		
Mus musculus	RefSeq	ILMN_248901	ILMN_248901	4930453N24RIK	NM_026273.1	NM_026273.1		67609	113931151	NM_026273.1	4930453N24Rik	NP_080549.1	ILMN_2888766	000610670	S	1148	GCTGCAGAAACAACACTGACCATCTATCTCTAAGCCACTGCCGATGTGAG				16qC1.3	Mus musculus RIKEN cDNA 4930453N24 gene (4930453N24Rik), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		AI649104	AI649104
Mus musculus	RefSeq	ILMN_195527	ILMN_226174	SSR1	NM_025965.2	NM_025965.2		107513	31982665	NM_025965.2	Ssr1	NP_080241.2	ILMN_2628138	000050164	S	2441	TTTCTGGACTGTAAACTTTGTATGTAATATAATGTGTGTGGTTTTTAATT	13	-	38070052-38070101	13qA3.3	Mus musculus signal sequence receptor, alpha (Ssr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI452176; AI159733; 6330400D04; SSR; 2510001K09Rik; TRAPA	AI452176; AI159733; 6330400D04; SSR; 2510001K09Rik; TRAPA
Mus musculus	RefSeq	ILMN_226174	ILMN_226174	SSR1	NM_025965.2	NM_025965.2		107513	31982665	NM_025965.2	Ssr1	NP_080241.2	ILMN_3007059	000610066	S	2578	AAAAAACATTTTCCAAAACCTTTGAATATTTAAATTTGGTAAGCTACTGT	13	-	38069915-38069964	13qA3.3	Mus musculus signal sequence receptor, alpha (Ssr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI452176; AI159733; 6330400D04; SSR; 2510001K09Rik; TRAPA	AI452176; AI159733; 6330400D04; SSR; 2510001K09Rik; TRAPA
Mus musculus	RefSeq	ILMN_239542	ILMN_239542	ZFP784	NM_001039532.1	NM_001039532.1		654801	87299614	NM_001039532.1	Zfp784	NP_001034621.1	ILMN_2910504	000450711	S	19	TTAGGTACAAGATGGCCGCCGCGCGCCCGGATCCCCCGATTCCGAGCTCA	7	-	4989968-4990014:4990015-4990017	7qA1	Mus musculus zinc finger protein 784 (Zfp784), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C730049F21Rik	C730049F21Rik
Mus musculus	RefSeq	ILMN_215910	ILMN_215910	SLC11A2	NM_008732.1	NM_008732.1		18174	6677988	NM_008732.1	Slc11a2	NP_032758.1	ILMN_2665063	001030682	S	2617	TACATCAAGTGTGTCTGTGGCTGTTGTTCCGTTGGTGTCTGTCCACCTGC	15	-	100218615-100218664	15qF1	Mus musculus solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 (Slc11a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [evidence IDA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IMP]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IDA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of cobalt (Co) ions from one side of a membrane to the other [goid 15087] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [evidence IDA]	Nramp2; DCT1; DMT1; mk; van	Nramp2; DCT1; DMT1; mk; van
Mus musculus	MEEBO	ILMN_209885	ILMN_209885	PIP5K1C	scl38655.14_451	XM_150337.1			20967813	XM_150337.1	Pip5k1c		ILMN_1225129	004490592	S	2138	AGTCCAGGTCCCCGCCCCACCTGTCACAGCCCCTCTTTTTGAGATCTGTA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [evidence IDA]		
Mus musculus	RefSeq	ILMN_220271	ILMN_220271	POLB	NM_011130.1	NM_011130.1		18970	21729748	NM_011130.1	Polb	NP_035260.1	ILMN_2789425	004070626	S	890	GCGCACGCCCTGGAAAAGGGCTTCACAATCAATGAGTACACCATCCGCCC	8	-	23740828-23740877	8qA2	Mus musculus polymerase (DNA directed), beta (Polb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence ISO]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence TAS]; Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template [goid 6287] [evidence TAS]; Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template [goid 6287] [evidence IMP]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence TAS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	A430088C08Rik	A430088C08Rik
Mus musculus	Riken	ILMN_205078	ILMN_205078	D430029G22RIK	ri|D430029G22|PX00195E07|AK052461|3422					AK052461	D430029G22Rik		ILMN_1219306	001980289	S	3154	TCTGACATGCCTGGTGCTGTTTTTGATTCCTCACAGAAAGGGGGTGGGCG										
Mus musculus	RefSeq	ILMN_202208	ILMN_259144	EG665806	XR_001789.2	XR_001789.2		665806	149270263	XR_001789.2	EG665806		ILMN_1238762	001500736	S	200	AAGAGCAGGAGAGACCCCCGTACGTTACATCAGGACCAAGCCCTTTCCCT	19	+	3205950-3205999	19qA	PREDICTED: Mus musculus predicted gene, EG665806 (EG665806), misc RNA.					
Mus musculus	MEEBO	ILMN_185107	ILMN_185107	4833427B12RIK	scl34250.9_89				51764452	XM_195728	4833427B12Rik		ILMN_2524667	003840279	S	321	GTCTGCTGACAGTTTTGTGCGGCAGCAAGAGGCACATGCCAAGCTGGACA										
Mus musculus	RefSeq	ILMN_222918	ILMN_222918	RHOX9	NM_023894.1	NM_023894.1		104384	12963858	NM_023894.1	Rhox9	NP_076383.1	ILMN_1234077	000650112	S	723	GGCTGATGATGTTCTGCGAACTGCCACCGATTACAGAGAACAACTCTCCC	X	-	35252383-35252432	XqA3.3	Mus musculus reproductive homeobox 9 (Rhox9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1600026O01Rik; Gpbox; Psx2; MGC107479	1600026O01Rik; Gpbox; Psx2; MGC107479
Mus musculus	RefSeq	ILMN_210420	ILMN_210420	2610029G23RIK	NM_026312.4	NM_026312.4		67683	146135007	NM_026312.4	2610029G23Rik	NP_080588.1	ILMN_2605448	001980246	S	1994	CATAAATATACAGTTCTATTTGAGGATAAATGTATTGAATACTAGGAAAA				XqD	Mus musculus RIKEN cDNA 2610029G23 gene (2610029G23Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_214391	ILMN_214391	SMPD1	NM_011421.1	NM_011421.1		20597	6755581	NM_011421.1	Smpd1	NP_035551.1	ILMN_1245356	001050215	S	1237	CCGCCTCATCTCTCTCAATATGAATTTTTGTTCCCGTGAGAACTTTTGGC	7	+	112705061-112705110	7qE3	Mus musculus sphingomyelin phosphodiesterase 1, acid lysosomal (Smpd1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IEA]	aSMase; A-SMase; ASM	aSMase; A-SMase; ASM
Mus musculus	RefSeq	ILMN_214391	ILMN_214391	SMPD1	NM_011421.1	NM_011421.1		20597	6755581	NM_011421.1	Smpd1	NP_035551.1	ILMN_2868987	002650113	S	2212	GTCTGACCTGGGCTTTGTCGAGGGCTCAGTGCTCTGGATAGTCAGACAGG	7	+	112706758-112706807	7qE3	Mus musculus sphingomyelin phosphodiesterase 1, acid lysosomal (Smpd1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IEA]	aSMase; A-SMase; ASM	aSMase; A-SMase; ASM
Mus musculus	RefSeq	ILMN_214391	ILMN_214391	SMPD1	NM_011421.1	NM_011421.1		20597	6755581	NM_011421.1	Smpd1	NP_035551.1	ILMN_2728521	001410017	S	1515	ATGAGGAAACTCTGAGCCGACCACTAGCTGTAGCCTTCCTGGCGCCCAGT	7	+	112705933-112705982	7qE3	Mus musculus sphingomyelin phosphodiesterase 1, acid lysosomal (Smpd1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IEA]	aSMase; A-SMase; ASM	aSMase; A-SMase; ASM
Mus musculus	RefSeq	ILMN_195791	ILMN_259216	WNK4	NM_175638.2	NM_175638.2		69847	66793432	NM_175638.2	Wnk4	NP_783569.1	ILMN_2628098	001850255	S	3485	TTATACAGCCGGCTTGGGAAACAGCCCCCACCTGGTATTGTAGCTCCAGC	11	+	101137847-101137896	11qD	Mus musculus WNK lysine deficient protein kinase 4 (Wnk4), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IDA]; Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 50794] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IDA]; The regulation of the levels, transport, and metabolism of chloride ions within a cell or between a cell and its external environment [goid 30644] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	PHA2B; Prkwnk4; 2010002J11Rik	PHA2B; Prkwnk4; 2010002J11Rik
Mus musculus	RefSeq	ILMN_195791	ILMN_259216	WNK4	NM_175638.2	NM_175638.2		69847	66793432	NM_175638.2	Wnk4	NP_783569.1	ILMN_2518744	006100209	S	3867	GGCACGGAGAGTGCGTTGTGTTGTATCCTGAAGAGTCAAAACCTTGCGGG	11	+	101138486-101138535	11qD	Mus musculus WNK lysine deficient protein kinase 4 (Wnk4), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IDA]; Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 50794] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IDA]; The regulation of the levels, transport, and metabolism of chloride ions within a cell or between a cell and its external environment [goid 30644] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	PHA2B; Prkwnk4; 2010002J11Rik	PHA2B; Prkwnk4; 2010002J11Rik
Mus musculus	Riken	ILMN_206370	ILMN_206370	5730494J16RIK	ri|5730494J16|PX00005E23|AK077637|1875					AK077637	5730494J16Rik		ILMN_1249559	006280544	S	1730	CTCCCATAAATCAGAGCGGCCATCAGGACACAACAGGACCAGGCAGCACC										
Mus musculus	RefSeq	ILMN_197693	ILMN_253276	EG633285	XM_907666.2	XM_907666.2		633285	94370041	XM_907666.2	EG633285	XP_912759.1	ILMN_1252250	006270086	S	1516	CATGCCAGATAAACTCTGCACAACGCTGGAGGATGCAAAGGAGCTGGCAG				3qE3	PREDICTED: Mus musculus predicted gene, EG633285 (EG633285), mRNA.					
Mus musculus	RefSeq	ILMN_197780	ILMN_197780	LOC381514	XM_358603.1	XM_358603.1			38078080	XM_358603.1	LOC381514		ILMN_1238910	006560241	S	302	GATGGTGGGACTCTCCAGCCCTGTGCAGTAAAAGATTGATCTGTGGGCTG										
Mus musculus	RefSeq	ILMN_199854	ILMN_199854	LOC383085	XM_356861.1	XM_356861.1			38078201	XM_356861.1	LOC383085		ILMN_2536723	004880615	S	220	ACAGACGCGCTCATCTGCTGGAGCCCGGTAGGAGCTGGCATGGGCCGGAG										
Mus musculus	MEEBO	ILMN_224227	ILMN_224227	GLRX1	scl093692.3_322				31981457	NM_053108	Glrx1		ILMN_2776922	006330543	S	1227	CATGGATCTGTAGATCACTTCTCTGGTCTCCAGTGAGGAGGATTCATTAC										
Mus musculus	RefSeq	ILMN_199225	ILMN_199225	LOC328031	XM_286390.1	XM_286390.1			28514712	XM_286390.1	LOC328031		ILMN_2534489	004560369	S	418	CCGCTGCCAGGTTTGGACTGAACTGCTGAGAAAGAAGATTGAGCTTGCTC										
Mus musculus	RefSeq	ILMN_250040	ILMN_250040	LOC619597	NM_001039219.1	NM_001039219.1		619597	85986608	NM_001039219.1	LOC619597	NP_001034308.1	ILMN_3015989	000520474	I	3865	CCTGACACTGAGCCGTGACCCCAACCTTCCTGAAACCTTCATTTCTAGGG	1	+	95841751-95841800	1qD	Mus musculus hypothetical LOC619597 (LOC619597), mRNA.					
Mus musculus	RefSeq	ILMN_250040	ILMN_250040	LOC619597	NM_001039219.1	NM_001039219.1		619597	85986608	NM_001039219.1	LOC619597	NP_001034308.1	ILMN_3087413	005360424	A	1442	TTGGCTTTGACAACAACGCCCCAGCAGACAAGGACTATGTTCGCAAATGC	1	+	95839328-95839377	1qD	Mus musculus hypothetical LOC619597 (LOC619597), mRNA.					
Mus musculus	RefSeq	ILMN_208907	ILMN_208907	GOLGA1	NM_029793.1	NM_029793.1		76899	30794191	NM_029793.1	Golga1	NP_084069.1	ILMN_1225918	002490209	S	4171	GCTCCTCCAGCACTAGGAGAGTGCAGTAGCTATTCCAAGTGGCTTCATGC	2	-	38872188-38872237	2qB	Mus musculus golgi autoantigen, golgin subfamily a, 1 (Golga1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]			MGC91089; golgin-97; AW107649; 0710001G09Rik; 2210418B03Rik	MGC91089; golgin-97; AW107649; 0710001G09Rik; 2210418B03Rik
Mus musculus	RefSeq	ILMN_200521	ILMN_311078	D130003B22RIK	XM_001474316.1	XM_001474316.1		240095	149269259	XM_001474316.1	D130003B22Rik	XP_001474366.1	ILMN_1240555	006650398	S	568	GTGGAGTCGCTCCGCACATACCTGGAGATAAGGAAGGAGACTCTGCTAAG	17	-	37174150-37174199	17qB1	PREDICTED: Mus musculus RIKEN cDNA D130003B22 gene (D130003B22Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200798	ILMN_239591	EG622222	XM_886633.2	XM_886633.2		622222	149256444	XM_886633.2	EG622222	XP_891726.2	ILMN_1259849	003890114	S	1143	ATGTCGCTGTCCGTGCGCGATGGCTGGCATTGGAACGTGCGGGGCTATAA	7	-	24585816-24585865	7qA3	PREDICTED: Mus musculus predicted gene, EG622222 (EG622222), mRNA.					
Mus musculus	RefSeq	ILMN_209051	ILMN_209051	IFT20	NM_018854.4	NM_018854.4		55978	142375735	NM_018854.4	Ift20	NP_061342.1	ILMN_2671767	004610167	S	527	GTGGTCTAATTGAGCTTGTTGATCAGCTTGCCAAAGAAGCAGAGAACGAG	11	+	78352027-78352076	11qB5	Mus musculus intraflagellar transport 20 homolog (Chlamydomonas) (Ift20), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]		0610009H04Rik; RP23-399H5.8; AU015496	0610009H04Rik; RP23-399H5.8; AU015496
Mus musculus	RefSeq	ILMN_216516	ILMN_216516	BLK	NM_007549.2	NM_007549.2		12143	31982489	NM_007549.2	Blk	NP_031575.2	ILMN_2976441	003290279	S	2232	TCAGACCCCGATAGTCCCGAAATCAGTCTGACCAGTTAGCGATGGACAGG	14	-	63991867-63991916	14qD1	Mus musculus B lymphoid kinase (Blk), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216516	ILMN_216516	BLK	NM_007549.2	NM_007549.2		12143	31982489	NM_007549.2	Blk	NP_031575.2	ILMN_2976440	003140491	S	2093	CATGAGCTCTCAAGGCACAACCTCGGTCCACCTTTCACTGGCTGTGTGCC	14	-	63992006-63992055	14qD1	Mus musculus B lymphoid kinase (Blk), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216516	ILMN_216516	BLK	NM_007549.2	NM_007549.2		12143	31982489	NM_007549.2	Blk	NP_031575.2	ILMN_2697505	002120343	S	1074	CCCGAAGAACCTTTGGGCCCAAGATGAATGGGAAATCCCCAGGCAGTCTC	14	-	63999589-63999638	14qD1	Mus musculus B lymphoid kinase (Blk), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196637	ILMN_256145	TXNDC13	NM_029148.1	NM_029148.1		52837	112817606	NM_029148.1	Txndc13	NP_083424.1	ILMN_1232084	001050719	S	4985	CCCTGAGCCTATGTACTGCCATTTGATTGTCAGGTTCCATTTGTGTCAAA	2	-	134420350-134420399	2qF2-qF3	Mus musculus thioredoxin domain containing 13 (Txndc13), mRNA. XM_902134 XM_902137 XM_925631 XM_925632 XM_925633	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		mKIAA1162; D2Bwg1356e; 4930500L08Rik; 2810417D04Rik; AW046784; AI843224	mKIAA1162; D2Bwg1356e; 4930500L08Rik; 2810417D04Rik; AW046784; AI843224
Mus musculus	RefSeq	ILMN_256145	ILMN_256145	TXNDC13	NM_029148.1	NM_029148.1		52837	112817606	NM_029148.1	Txndc13	NP_083424.1	ILMN_2811282	003290053	S	4671	TCGTGTAGACTGTGATGTTCACCTGTGGCTTTGACTCATTTCTAATGTGG	2	-	134420664-134420713	2qF2-qF3	Mus musculus thioredoxin domain containing 13 (Txndc13), mRNA. XM_902134 XM_902137 XM_925631 XM_925632 XM_925633	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		mKIAA1162; D2Bwg1356e; 4930500L08Rik; 2810417D04Rik; AW046784; AI843224	mKIAA1162; D2Bwg1356e; 4930500L08Rik; 2810417D04Rik; AW046784; AI843224
Mus musculus	RefSeq	ILMN_201178	ILMN_201178	LOC384897	XM_357928.1	XM_357928.1			38089631	XM_357928.1	LOC384897		ILMN_1258413	003390224	S	809	GACCCGTGGAGCCTGAGATGGCAAGTCACCATACTGGAGTCACACTAACC										
Mus musculus	Riken	ILMN_203216	ILMN_203216	B230215E14RIK	ri|B230215E14|PX00069P18|AK045609|3116					AK045609	B230215E14Rik		ILMN_1229011	005360661	S	2670	CTGTATGTGCAAGGTCCTAGTAGGTTCTGAGTCCAGACTGTTGGGCTGCA										
Mus musculus	RefSeq	ILMN_214317	ILMN_214317	HEATR1	NM_144835.4	NM_144835.4		217995	118130041	NM_144835.4	Heatr1	NP_659084.3	ILMN_1236343	001070368	S	1662	GGCATTGATGAGACTTTTATTAAAGAAGCTATTCTAACCCGGTTAGGCGA	13	+	12500924-12500973	13qA1	Mus musculus HEAT repeat containing 1 (Heatr1), mRNA.				B130016L12Rik; BC019693; MGC30806; AA517551	B130016L12Rik; BC019693; MGC30806; AA517551
Mus musculus	RefSeq	ILMN_214317	ILMN_214317	HEATR1	NM_144835.4	NM_144835.4		217995	118130041	NM_144835.4	Heatr1	NP_659084.3	ILMN_2800256	005090196	S	6355	CCCCTAAGGTGCGGTTTGCAGCCTTGATTACTGTCTTGGCACTGGCTGAG	13	+	12528088-12528095:12530101-12530142	13qA1	Mus musculus HEAT repeat containing 1 (Heatr1), mRNA.				B130016L12Rik; BC019693; MGC30806; AA517551	B130016L12Rik; BC019693; MGC30806; AA517551
Mus musculus	RefSeq	ILMN_214317	ILMN_214317	HEATR1	NM_144835.4	NM_144835.4		217995	118130041	NM_144835.4	Heatr1	NP_659084.3	ILMN_1214036	001510014	S	6698	GCCTGTCTGGGATACCACAGAATCCTCTCCTGCCTTTTGTACAGAGTTGC	13	+	12531082-12531131	13qA1	Mus musculus HEAT repeat containing 1 (Heatr1), mRNA.				B130016L12Rik; BC019693; MGC30806; AA517551	B130016L12Rik; BC019693; MGC30806; AA517551
Mus musculus	RefSeq	ILMN_214317	ILMN_214317	HEATR1	NM_144835.4	NM_144835.4		217995	118130041	NM_144835.4	Heatr1	NP_659084.3	ILMN_2733973	004250743	S	3335	GTATTCAGCTTCACTCTTACAGAAAGACCCAAAGAGTCTAGACCTGTTCA	13	+	12509849-12509898	13qA1	Mus musculus HEAT repeat containing 1 (Heatr1), mRNA.				B130016L12Rik; BC019693; MGC30806; AA517551	B130016L12Rik; BC019693; MGC30806; AA517551
Mus musculus	RefSeq	ILMN_212832	ILMN_212832	CCDC73	NM_177600.3	NM_177600.3		211936	124286864	NM_177600.3	Ccdc73	NP_808268.1	ILMN_2816386	004260132	S	2700	GAAGACCCCATGTTGTATTTACAGAGCTTGCTGTTAGCACCTAGGCACCT	2	+	104839443-104839492	2qE2	Mus musculus coiled-coil domain containing 73 (Ccdc73), mRNA.				4931417A20; RP23-198B6.1; BC095976	4931417A20; RP23-198B6.1; BC095976
Mus musculus	RefSeq	ILMN_203197	ILMN_186091	TRIB2	NM_144551.5	NM_144551.5		217410	83921623	NM_144551.5	Trib2	NP_653134.2	ILMN_1243319	004480553	S	654	CAGTTAAGACTTAGGTAACTGCCCTCTCTAGCACCCCCCTTACACGCCCC	12	-	15822888-15822937	12qA1.1	Mus musculus tribbles homolog 2 (Drosophila) (Trib2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	TRB-2; AW319517	TRB-2; AW319517
Mus musculus	RefSeq	ILMN_213601	ILMN_213601	PRPS2	NM_026662.4	NM_026662.4		110639	146141229	NM_026662.4	Prps2	NP_080938.1	ILMN_1234614	001770187	S	3384	CTATGTAAGGAGAGCATGTTAGTCATATCTACCCAAAAAGGGGAGCCAGG				XqF5	Mus musculus phosphoribosyl pyrophosphate synthetase 2 (Prps2), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9156] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells [goid 44249] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [evidence IEA]	AI464149; Prps-2; 2610101M19Rik; AA589463; MGC28388	AI464149; Prps-2; 2610101M19Rik; AA589463; MGC28388
Mus musculus	Riken	ILMN_205970	ILMN_205970	D130062J21RIK	ri|D130062J21|PX00185B14|AK051661|2744					AK051661	D130062J21Rik		ILMN_2576568	005390309	S	2598	AGATATCTGAGGCAAGCAGGGGCCACCATGCTGTGTGTCCCCCTCAGTGG										
Mus musculus	RefSeq	ILMN_187518	ILMN_246342	LOC674611	XM_980150.1	XM_980150.1		674611	94388323	XM_980150.1	LOC674611	XP_985244.1	ILMN_2474128	000110324	S	2255	TGATGTGGTGCCCAAAATGCTTGATGTGCTAGAGGGGGGCACACTCAGTG					PREDICTED: Mus musculus similar to Su48, transcript variant 3 (LOC674611), mRNA.					
Mus musculus	RefSeq	ILMN_187518	ILMN_246342	LOC674611	XM_980150.1	XM_980150.1		674611	94388323	XM_980150.1	LOC674611	XP_985244.1	ILMN_1217442	003420242	S	4011	GCTGCAGGGCCAGTCAAATGTATAGATGTTAGAGTATTTCTGTTCCCAGG					PREDICTED: Mus musculus similar to Su48, transcript variant 3 (LOC674611), mRNA.					
Mus musculus	RefSeq	ILMN_218037	ILMN_218037	OLFR530	NM_146519.1	NM_146519.1		258512	33238963	NM_146519.1	Olfr530	NP_666730.1	ILMN_2690783	005270239	S	863	TCTATACCCTGAGAAATAAGGAATTTAAAATATCCTTTAAAAAACTCTTA	7	-	147558595-147558644	7qF4	Mus musculus olfactory receptor 530 (Olfr530), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR252-2	MOR252-2
Mus musculus	RefSeq	ILMN_214721	ILMN_214721	ALB	NM_009654.2	NM_009654.2		11657	141803359	NM_009654.2	Alb	NP_033784.1	ILMN_2651160	007400647	S	1938	GGTGTAAAATCAACACCCTAAGGAACACAAATTTCTTTAAACATTTGACT	5	+	90905536-90905585	5qE1	Mus musculus albumin (Alb), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	Alb-1; Alb1	Alb-1; Alb1
Mus musculus	RefSeq	ILMN_216699	ILMN_216699	KCNB1	NM_008420.3	NM_008420.3		16500	40254348	NM_008420.3	Kcnb1	NP_032446.2	ILMN_2674184	003400044	S	3399	GGGTCCCAAACAGGGCTAGCCCGGACTGAAAAGATAAGCGTCAAATATGC	2	-	166929154-166929203	2qH3	Mus musculus potassium voltage gated channel, Shab-related subfamily, member 1 (Kcnb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence ISO]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Kcr1-1; Kv2.1; Shab	Kcr1-1; Kv2.1; Shab
Mus musculus	RefSeq	ILMN_201118	ILMN_201118	LOC384829	XM_357884.1	XM_357884.1			38089272	XM_357884.1	LOC384829		ILMN_2588077	002070437	S	283	ATGGGGACAGATGCTCACACAGCCACCATGGGGACAGATGCTCACACAGC										
Mus musculus	RefSeq	ILMN_223157	ILMN_223157	BC068281	NM_173416.2	NM_173416.2		238037	142362297	NM_173416.2	BC068281	NP_775592.1	ILMN_2760057	005960367	S	2507	GTCGACCAGCTTTCTCAAGGAACCTGGATCTCATTGATTTGGCCAGTGAG	12	+	4859334-4859383	12qA1.1	Mus musculus cDNA sequence BC068281 (BC068281), mRNA.				A430092C04	A430092C04
Mus musculus	RefSeq	ILMN_213165	ILMN_213165	SLC1A3	NM_148938.2	NM_148938.2		20512	40254195	NM_148938.2	Slc1a3	NP_683740.1	ILMN_2634317	002060082	S	4040	CCCGGGCTCTGCCTATGTGTGTACCCACTGTGGACTGGGAAACTTCACTT	15	-	8584163-8584212	15qA1	Mus musculus solute carrier family 1 (glial high affinity glutamate transporter), member 3 (Slc1a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Extracellular matrix material consisting of polysaccharides and protein [goid 43205] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [evidence IMP]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inorganic substance stimulus [goid 10035] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups [goid 43200] [evidence ISO]; The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions [goid 21545] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50806] [evidence IMP]; The process by which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron [goid 48667] [evidence IMP]; The actions or reactions of an organism in response to a sound [goid 31223] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Interacting selectively with an amino acid, organic acids containing one or more amino substituents [goid 16597] [evidence IDA]; Interacting selectively with glutamate, the anion of 2-aminopentanedioic acid [goid 16595] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glutamate(out) + H+(out) = glutamate(in) + H+(in) [goid 5314] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGluT1; B430115D02Rik; Eaat1; GluT-1; GLAST; GLAST-1; AI504299; Gmt1; GLU-T	MGluT1; B430115D02Rik; Eaat1; GluT-1; GLAST; GLAST-1; AI504299; Gmt1; GLU-T
Mus musculus	RefSeq	ILMN_202646	ILMN_327996	LOC100045224	XM_001473896.1	XM_001473896.1		100045224	149254240	XM_001473896.1	LOC100045224	XP_001473946.1	ILMN_2551201	001510692	S	113	CCTCGGCAGAGCGTTTCCGCTACCAGACATATTTTCTTTGCACTTGCCGG					PREDICTED: Mus musculus similar to PR domain containing 8 (LOC100045224), mRNA.					
Mus musculus	MEEBO	ILMN_210953	ILMN_210953	DAB2IP	scl0003047.1_416	XM_130206.4			38074623	XM_130206.4	Dab2ip		ILMN_2610965	000050414	S	3932	GCTAGGCAAGCTGCACTTAATGCTCCTAGAGTCCTCACTAGAAAGCGTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204456	ILMN_204456	2500001N03RIK	ri|B130020C21|PX00157B14|AK045022|1463					AK045022	2500001N03Rik		ILMN_2565117	003370091	S	1177	AGGCTGAGCTACACCACAACTAGAAATGGGTTTTTCCAGTAAACAGCACC										
Mus musculus	RefSeq	ILMN_190673	ILMN_257576	RIT2	NM_009065.2	NM_009065.2		19762	31982829	NM_009065.2	Rit2	NP_033091.1	ILMN_1237399	004780524	S	1598	GAATCTTCTTAGAATTGCTTCACCTGCATAGTAGCCATCTGTCTGCAGCG	18	-	31134122-31134171	18qB1	Mus musculus Ras-like without CAAX 2 (Rit2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Roc2; Rin; RIBA	Roc2; Rin; RIBA
Mus musculus	RefSeq	ILMN_216172	ILMN_216172	ING3	NM_023626.3	NM_023626.3		71777	31542997	NM_023626.3	Ing3	NP_076115.2	ILMN_2685695	006650196	S	160	TTCCGATGGACCTACGGGACCGCTTCACGGAGATGCGCGAGATGGATCTG	6	+	21900050-21900099	6qA3.1	Mus musculus inhibitor of growth family, member 3 (Ing3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1300013A07Rik; P47ING3	1300013A07Rik; P47ING3
Mus musculus	RefSeq	ILMN_222919	ILMN_222919	STRC	NM_080459.2	NM_080459.2		140476	120300984	NM_080459.2	Strc	NP_536707.2	ILMN_2756762	000830168	S	5565	GGAAGTGCATACTAATTATTCTCAGTAAGTGGATGAGGATTGTGGGTAAA	2	-	121189605-121189654	2qE5	Mus musculus stereocilin (Strc), mRNA.		The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DFNB16	DFNB16
Mus musculus	RefSeq	ILMN_216237	ILMN_216237	SCHIP1	NM_013928.4	NM_013928.4		30953	148277019	NM_013928.4	Schip1	NP_038956.2	ILMN_1244514	006350687	S	881	GCTCCTTATTCGAGATGAGCTGCACACAGAACAAGATGCCATGCTGGTGG				3qE1	Mus musculus schwannomin interacting protein 1 (Schip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISA]	SCHIP-1; Nf2ip	SCHIP-1; Nf2ip
Mus musculus	MEEBO	ILMN_190796	ILMN_190796	2210418H06RIK	scl070159.1_103						2210418H06Rik		ILMN_2473357	001660670	S	16	GCCAGAAACTCGGGGGAACACTCACCTCTGCCCGCTCTCATTCTTTGTTT										
Mus musculus	RefSeq	ILMN_242894	ILMN_242894	SACM1L	NM_030692.1	NM_030692.1		83493	13507621	NM_030692.1	Sacm1l	NP_109617.1	ILMN_2929952	004830520	S	3298	CTAGTGTGGCTGCTTCGCAAGGACTAATGTCAGAGGGTTAGGCTGCAAGT	9	+	123441161-123441210	9qF4	Mus musculus SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae) (Sacm1l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	mKIAA0851; Sac1p; SAC1	mKIAA0851; Sac1p; SAC1
Mus musculus	RefSeq	ILMN_216032	ILMN_216032	GOLGA7	NM_020585.2	NM_020585.2		57437	109809742	NM_020585.2	Golga7	NP_065610.2	ILMN_2666519	001990088	S	1676	CTTCTTTATCTCTATACTCTCTTAGTATCGGAATTTCTTATGTTCTTTTA	8	-	24352103-24352152	8qA2	Mus musculus golgi autoantigen, golgin subfamily a, 7 (Golga7), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence ISO]	The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis [goid 6893] [evidence ISO]		C130038N16Rik; AB041568; MGC30271; R75586; GOLGA3AP1; GCP16; MGC102434; MGC118465; HSPC041	C130038N16Rik; AB041568; MGC30271; R75586; GOLGA3AP1; GCP16; MGC102434; MGC118465; HSPC041
Mus musculus	Riken	ILMN_202694	ILMN_202694	CSNK	ri|D730048E13|PX00091M15|AK021350|1256					AK021350	Csnk		ILMN_1227118	000620279	S	1067	CCTAGATGCTAGAGGATTGAGGCAGGAAGATCTTAAGTTCAAGGCCAGCC										
Mus musculus	RefSeq	ILMN_197275	ILMN_236447	YPEL4	NM_001005342.2	NM_001005342.2		241525	53292601	NM_001005342.2	Ypel4	NP_001005342.1	ILMN_1254473	004880563	S	498	CCTGCTCACAGGACTCCACTCGGTAGCTGACATTTTCTGCGAAAGCTGCA	2	+	84577613-84577662	2qD	Mus musculus yippee-like 4 (Drosophila) (Ypel4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_236447	ILMN_236447	YPEL4	NM_001005342.2	NM_001005342.2		241525	53292601	NM_001005342.2	Ypel4	NP_001005342.1	ILMN_2966558	007040603	S	702	TCCTCACACCAGTCTCCTGGCCCTGCTGAGCAGTCCACACCAGCATGAGT	2	+	84577984-84578033	2qD	Mus musculus yippee-like 4 (Drosophila) (Ypel4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_220896	ILMN_220896	LMO1	NM_057173.2	NM_057173.2		109594	148747592	NM_057173.2	Lmo1	NP_476514.1	ILMN_1240303	003940326	S	1013	TATGAGAAATGTAATGCGATTTTATTACTGGCGTGGATTAAACTTATGAA				7qE3	Mus musculus LIM domain only 1 (Lmo1), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rbtn1; Rbtn-1; Ttg1	Rbtn1; Rbtn-1; Ttg1
Mus musculus	RefSeq	ILMN_222232	ILMN_222232	SLC22A17	NM_021551.3	NM_021551.3		59049	142385256	NM_021551.3	Slc22a17	NP_067526.2	ILMN_2746664	003890706	S	1679	ATGGGCCATGGAGCCTTCCTGCAGCATGTGGTACTGGCGGCCTGTGCCCT	14	-	55526075-55526124	14qC3	Mus musculus solute carrier family 22 (organic cation transporter), member 17 (Slc22a17), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	BOIT; Boct; mBOCT; AW555662; AU041908; 1700094C23Rik	BOIT; Boct; mBOCT; AW555662; AU041908; 1700094C23Rik
Mus musculus	RefSeq	ILMN_222232	ILMN_222232	SLC22A17	NM_021551.3	NM_021551.3		59049	142385256	NM_021551.3	Slc22a17	NP_067526.2	ILMN_2777416	004830020	S	719	ATTGTGCTGCTGACCTTGGGGCTTGTGGGTCCCTGTGGAGTGGGAGGAGC	14	-	55528598-55528647	14qC3	Mus musculus solute carrier family 22 (organic cation transporter), member 17 (Slc22a17), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	BOIT; Boct; mBOCT; AW555662; AU041908; 1700094C23Rik	BOIT; Boct; mBOCT; AW555662; AU041908; 1700094C23Rik
Mus musculus	Riken	ILMN_205555	ILMN_205555	ZFP207	ri|9030404K10|PX00025J13|AK033497|2152					AK033497	Zfp207		ILMN_1220000	001110370	S	1779	CCCTGTCTCCAAACCCCCCCCCCCCCCCAAAAAAAAAAGATGAATTACTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]				
Mus musculus	RefSeq	ILMN_210704	ILMN_210704	IFI202B	NM_008327.1	NM_008327.1		26388	6680352	NM_008327.1	Ifi202b	NP_032353.1	ILMN_3085992	000650601	A	1458	TGGGATGATACAGGAGCAATGAAAGTGGTGGTATCTGGACAACTGACCAG	1|NT_039195.1	+	79664-79667:79668-79713	1qH3	Mus musculus interferon activated gene 202B (Ifi202b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Ifi202; Ifi202a; Ifbip-1	Ifi202; Ifi202a; Ifbip-1
Mus musculus	RefSeq	ILMN_210704	ILMN_210704	IFI202B	NM_008327.1	NM_008327.1		26388	6680352	NM_008327.1	Ifi202b	NP_032353.1	ILMN_3014753	000450040	I	148	CATCACTGCAGAAATATCCAGGAAGCTGACACACTCTGCCTTGTTGGAGA	1|NT_039195.1	+	67007-67056	1qH3	Mus musculus interferon activated gene 202B (Ifi202b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Ifi202; Ifi202a; Ifbip-1	Ifi202; Ifi202a; Ifbip-1
Mus musculus	RefSeq	ILMN_214939	ILMN_214939	MTMR2	NM_023858.1	NM_023858.1		77116	23956229	NM_023858.1	Mtmr2	NP_076347.1	ILMN_2856144	002070403	S	3053	GTCACCCAAAGAATACTAAAGTACTGCAGTCCTGTATTCACACTGGGAGC	9	+	13556143-13556192	9qA1	Mus musculus myotubularin related protein 2 (Mtmr2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IDA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence IPI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	6030445P13Rik	6030445P13Rik
Mus musculus	Riken	ILMN_202728	ILMN_202728	1700091C19RIK	ri|1700091C19|ZX00077K13|AK018918|734					AK018918	1700091C19Rik		ILMN_2551824	004220176	S	522	GGAACTCTGGACGGAATGGAGAGAAGGCATCAGGCTCAAGGAGACAGGTC										
Mus musculus	Riken	ILMN_205469	ILMN_205469	A630053N20RIK	ri|A630053N20|PX00147I21|AK042036|2517					AK042036	A630053N20Rik		ILMN_1233563	001770039	S	2275	AGCTGTAGTGCAGTCTTGGTCTCTGTGGGGCAGTGCAGTCTCCAGGAAGC										
Mus musculus	RefSeq	ILMN_223664	ILMN_223664	MAGEA3	NM_020017.1	NM_020017.1		17139	9910399	NM_020017.1	Magea3	NP_064401.1	ILMN_2767393	000070017	S	641	CATAGGGTTGTGTGGTGGGAGGGATCCTTACATACATAAAGACCCCAGGA	X	-	151383358-151383407	XqF3	Mus musculus melanoma antigen, family A, 3 (Magea3), mRNA.				Mage-a3	Mage-a3
Mus musculus	Riken	ILMN_205642	ILMN_205642	KIF1B	ri|9630038C03|PX00116P19|AK036129|2982					AK036129	Kif1b		ILMN_1233410	002260243	S	2087	GGATAACTGCACAAGCAAGGTACGGTGGGGATGGTCACGCTGAACTAGCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence NAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence TAS]		
Mus musculus	RefSeq	ILMN_200840	ILMN_239121	8030474K03RIK	XM_001000772.2	XM_001000772.2		382231	149271836	XM_001000772.2	8030474K03Rik	XP_001000772.1	ILMN_1231277	005340605	S	1804	CCCAGCGTTTGAGGACTGCCTATCCATGCTGTTCTCCTCGGTCATGCAGG	X	+	98993458-98993495:98993681-98993692	XqD	PREDICTED: Mus musculus RIKEN cDNA 8030474K03 gene (8030474K03Rik), mRNA.					
Mus musculus	MEEBO	ILMN_223259	ILMN_223259	GAK	scl0004154.1_3				40675413	BC065052	Gak		ILMN_2761542	001170133	S	374	GCCACCCCAATATTGTCCAGTTCTGCTCTGCAGCATCCATAGGAAAAGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205794	ILMN_205794	E030042M04RIK	ri|E030042M04|PX00206F04|AK053214|613					AK053214	E030042M04Rik		ILMN_1236550	006280470	S	435	GGCCTGGATGAGGGTCAAAAACCTGCCCGTAACAAAGCCCCACTGTTCTG										
Mus musculus	RefSeq	ILMN_215398	ILMN_215398	STX1B1	NM_019560.1	NM_019560.1		79361	9625038	NM_019560.1	Stx1b1	NP_062506.1	ILMN_1237525	000070253	S	1277	GATAGCAGAAGACGTGCTAAACATTGACACCAATATGCATGCCCGAGGGC	7	-	127598239-127598288		Mus musculus syntaxin 1B1 (Stx1b1), mRNA.				Stx1bl	Stx1bl
Mus musculus	Riken	ILMN_205167	ILMN_205167	EOMES	ri|A730085J21|PX00153I19|AK043327|1650					AK043327	Eomes		ILMN_2570496	003170707	S	1382	GGTCAATGGAGTTTCATCTTCGAGCCCATTTGCTGGGTCACCTTTAACAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223109	ILMN_223109	C3	scl49743.39.1_15	NM_009778.1			23956043	NM_009778.1	C3		ILMN_2759484	005860347	S	5003	GGGGCATTCACAGAATCTATGGTGGTTTATGGTTGTCCCAACTGACTACA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway [goid 6956] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of type IIa hypersensitivity, a type of inflammatory response [goid 1798] [evidence IMP]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218074	ILMN_218074	SYT5	NM_016908.2	NM_016908.2		53420	31560793	NM_016908.2	Syt5	NP_058604.1	ILMN_1220815	002900053	S	1375	TCTGCGGCCCCCTGACAGAGCCAGGCCAATACCAGCACCCTGATTTCCAT	7	-	4491692-4491699:4491700-4491741	7qA1	Mus musculus synaptotagmin V (Syt5), mRNA.	A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	SytV	SytV
Mus musculus	RefSeq	ILMN_215489	ILMN_237442	P2RX3	NM_145526.2	NM_145526.2		228139	84781757	NM_145526.2	P2rx3	NP_663501.2	ILMN_2772717	000670408	S	1871	TCACTGTTCAGCAGACAGGCAGTGCTTCCCGCTAAGACCTGAATCTTGCC	2	-	84838978-84839027	2qD	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 3 (P2rx3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract [goid 14832] [evidence IGI]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract [goid 14832] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbohydrate stimulus [goid 9743] [evidence IMP]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IGI]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IGI]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IGI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence TAS]	P2X3; MGC28163	P2X3; MGC28163
Mus musculus	RefSeq	ILMN_229199	ILMN_229199	OLFR299	NM_001011767.1	NM_001011767.1		257929	58801313	NM_001011767.1	Olfr299	NP_001011767.1	ILMN_2998284	003370370	S	796	GAAGTAGTTAAGGAGATGGCTCTTTCTGTGTCTTATACGATTGTCCCACC	7	+	93614718-93614767	7qD3	Mus musculus olfactory receptor 299 (Olfr299), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR221-2	MOR221-2
Mus musculus	RefSeq	ILMN_199168	ILMN_199168	LOC195671	XM_112465.3	XM_112465.3			38091560	XM_112465.3	LOC195671		ILMN_1238500	004210315	S	94	CTCCAAACGATATGTGAAAAGGGTGGACACACACCAGCCGAGCAAGATGC										
Mus musculus	MEEBO	ILMN_208662	ILMN_208662	D930015E06RIK	scl0229473.1_11	NM_172681.2			40254237	NM_172681.2	D930015E06Rik		ILMN_2588337	000990671	S	4693	GCGTAAACTGGTTGTCGCGATAGAGTACAACATTGGTGGATATTTTGGCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215683	ILMN_215683	SPNB2	NM_009260.2	NM_009260.2		20742	117938333	NM_009260.2	Spnb2	NP_033286.2	ILMN_1220066	001440730	S	282	ACCGGAATGCGACTGGCTTGAGGTCCAGCCCTTTCGCCTGGGCGGGAGCA	11	-	30097926-30097975	11qA3.3	Mus musculus spectrin beta 2 (Spnb2), transcript variant 2, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA];  [goid 7182] [evidence IDA];  [goid 7184] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik
Mus musculus	RefSeq	ILMN_215683	ILMN_215683	SPNB2	NM_009260.2	NM_009260.2		20742	117938333	NM_009260.2	Spnb2	NP_033286.2	ILMN_2662396	001010626	S	6823	CGTACCAAAACTACAAAAACTTTAATAGCAGACGGACAGCCAGTGACCAT	11	-	30009019-30009068	11qA3.3	Mus musculus spectrin beta 2 (Spnb2), transcript variant 2, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA];  [goid 7182] [evidence IDA];  [goid 7184] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik
Mus musculus	RefSeq	ILMN_215683	ILMN_215683	SPNB2	NM_009260.2	NM_009260.2		20742	117938333	NM_009260.2	Spnb2	NP_033286.2	ILMN_2689307	005090446	S	7981	CTCCCTTGCTCATTTGCCATATTTAGATGTCTTAGTGGAGTCAGAGCCCT	11	-	30007861-30007910	11qA3.3	Mus musculus spectrin beta 2 (Spnb2), transcript variant 2, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA];  [goid 7182] [evidence IDA];  [goid 7184] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik
Mus musculus	RefSeq	ILMN_237057	ILMN_237057	A430078G23RIK	NM_001033378.2	NM_001033378.2		319493	142377145	NM_001033378.2	A430078G23Rik	NP_001028550.1	ILMN_3163163	002030541	A	920	GCCTTGAACCCCCGGTGCTGGAGTGTTTGGAAAAGGACCATGTGGAGCCA	8	+	3386360-3386409	8qA1.1	Mus musculus RIKEN cDNA A430078G23 gene (A430078G23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215848	ILMN_260469	GPR126	NM_001002268.2	NM_001002268.2		215798	142375770	NM_001002268.2	Gpr126	NP_001002268.1	ILMN_2754155	003440524	S	6270	CTTTCACCCAGCTTTGTTGTTTTAATTAACTGCCCATTAGAGAGACTGTA	10	-	14122576-14122625	10qA2	Mus musculus G protein-coupled receptor 126 (Gpr126), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AI449247; DREG; Gm222; AW045736; 1190004A11Rik	AI449247; DREG; Gm222; AW045736; 1190004A11Rik
Mus musculus	RefSeq	ILMN_215848	ILMN_260469	GPR126	NM_001002268.2	NM_001002268.2		215798	142375770	NM_001002268.2	Gpr126	NP_001002268.1	ILMN_2664346	004180671	S	6340	TTGTGAAACAGTTTTCTGTAGTGATATTGTTGAATATGACAGGTAAAGCA	10	-	14122506-14122555	10qA2	Mus musculus G protein-coupled receptor 126 (Gpr126), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISO]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AI449247; DREG; Gm222; AW045736; 1190004A11Rik	AI449247; DREG; Gm222; AW045736; 1190004A11Rik
Mus musculus	RefSeq	ILMN_221214	ILMN_221214	MAN2C1	NM_028636.2	NM_028636.2		73744	118130507	NM_028636.2	Man2c1	NP_082912.1	ILMN_1213449	004730148	S	3133	GTCTTGACTGGATAGCTTTGGGAGTTCCTCATTTCCACCTCCCTAGCCCG	9	+	56989929-56989978	9qB	Mus musculus mannosidase, alpha, class 2C, member 1 (Man2c1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IEA]	1110025H24Rik	1110025H24Rik
Mus musculus	Riken	ILMN_203986	ILMN_203986	A530088L04RIK	ri|A530088L04|PX00143E01|AK041185|1645					AK041185	A530088L04Rik		ILMN_1254367	001570681	S	1305	CTCTGATGTCAACAAGCGGGGGCCAAGTTCCACGAGGGAGAGTTTAGAAG										
Mus musculus	RefSeq	ILMN_214498	ILMN_214498	9130404D08RIK	NM_028993.2	NM_028993.2		74549	31981306	NM_028993.2	9130404D08Rik	NP_083269.3	ILMN_2889120	006130739	S	2499	TCCTGGCAGCTATTTAGCTTTCCCATGGAGGACAGTTATGGGACCAGCTC	8	-	72947932-72947981	8qB3.3	Mus musculus RIKEN cDNA 9130404D08 gene (9130404D08Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC159271; C77863; KIAA0892; C79014; mKIAA0892; A930019L04Rik	MGC159271; C77863; KIAA0892; C79014; mKIAA0892; A930019L04Rik
Mus musculus	RefSeq	ILMN_215659	ILMN_215659	FMOD	NM_021355.2	NM_021355.2		14264	31981128	NM_021355.2	Fmod	NP_067330.1	ILMN_2999762	005080358	S	2387	CCCCACTGGGATAGAGCCACCAGGGTAGCGAGTGGCAAGAAGCAGTTGTA	1	+	135864216-135864265	1qE4	Mus musculus fibromodulin (Fmod), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU041740; SLRR2E; AI131919	AU041740; SLRR2E; AI131919
Mus musculus	RefSeq	ILMN_213683	ILMN_213683	RBM5	NM_148930.2	NM_148930.2		83486	34328369	NM_148930.2	Rbm5	NP_683732.1	ILMN_2942492	000050368	S	2872	TGTGTCCCTACTTCCTGGGGGCTTGAGAAGCTCGGAGTGGTTGTCAACAC	9	-	107642965-107643014	9qF1	Mus musculus RNA binding motif protein 5 (Rbm5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D030069N10Rik	D030069N10Rik
Mus musculus	RefSeq	ILMN_213683	ILMN_213683	RBM5	NM_148930.2	NM_148930.2		83486	34328369	NM_148930.2	Rbm5	NP_683732.1	ILMN_2942499	007400110	S	2997	TTTGTACAGAATTTTGGAAGATTTTCAGTCTAGCTGCCACGTCTGGCTCC	9	-	107642840-107642889	9qF1	Mus musculus RNA binding motif protein 5 (Rbm5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D030069N10Rik	D030069N10Rik
Mus musculus	RefSeq	ILMN_213683	ILMN_213683	RBM5	NM_148930.2	NM_148930.2		83486	34328369	NM_148930.2	Rbm5	NP_683732.1	ILMN_2639635	003460056	S	2989	ATTATACATTTGTACAGAATTTTGGAAGATTTTCAGTCTAGCTGCCACGT	9	-	107642848-107642897	9qF1	Mus musculus RNA binding motif protein 5 (Rbm5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D030069N10Rik	D030069N10Rik
Mus musculus	RefSeq	ILMN_219433	ILMN_219433	SLC39A10	NM_172653.2	NM_172653.2		227059	40254227	NM_172653.2	Slc39a10	NP_766241.2	ILMN_2708841	004560136	S	4621	GTATGATGCTGTCACCATGTGACATCCATAAAGATTTTGGTGTATACCAC	1	-	46864679-46864728	1qC1.1	Mus musculus solute carrier family 39 (zinc transporter), member 10 (Slc39a10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	mKIAA1265; 2900042E17Rik; 5430433I10	mKIAA1265; 2900042E17Rik; 5430433I10
Mus musculus	RefSeq	ILMN_219570	ILMN_219570	4933402J07RIK	NM_177901.2	NM_177901.2		330820	31342715	NM_177901.2	4933402J07Rik	NP_808569.1	ILMN_2976293	001190035	S	739	GCAAGATGCTGAAGCCAGAGGAGGTGCTGAGCTGCCGATACCTGCGTTTG	8	+	90476323-90476358:90479054-90479067	8qC3	Mus musculus RIKEN cDNA 4933402J07 gene (4933402J07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_189742	ILMN_245218	3110052M02RIK	XM_976578.1	XM_976578.1		73229	94401698	XM_976578.1	3110052M02Rik	XP_981672.1	ILMN_1251142	002070768	S	1433	GCTGTTTTGCTTATGGATGATTACTTCTTAGTTCTCCCGTATTTATCTAC	17	+	21361793-21361842		PREDICTED: Mus musculus RIKEN cDNA 3110052M02 gene, transcript variant 2 (3110052M02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211899	ILMN_211899	TCP10A	NM_009340.1	NM_009340.1		21460	6678260	NM_009340.1	Tcp10a	NP_033366.1	ILMN_3157987	001240195	A	1347	CCAAGACTGTGTATTGCAATGGCTGCCAGGAGACCAAGTATGCCTCAGGG					Mus musculus t-complex protein 10a (Tcp10a), mRNA.				D17Leh66A; D17Leh66aa; T66A-a; Tcp-10a	D17Leh66A; D17Leh66aa; T66A-a; Tcp-10a
Mus musculus	RefSeq	ILMN_211899	ILMN_211899	TCP10A	NM_009340.1	NM_009340.1		21460	6678260	NM_009340.1	Tcp10a	NP_033366.1	ILMN_3078696	002370221	I	1782	ACAACGCTGGCTCCGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTACT					Mus musculus t-complex protein 10a (Tcp10a), mRNA.				D17Leh66A; D17Leh66aa; T66A-a; Tcp-10a	D17Leh66A; D17Leh66aa; T66A-a; Tcp-10a
Mus musculus	RefSeq	ILMN_211899	ILMN_211899	TCP10A	NM_009340.1	NM_009340.1		21460	6678260	NM_009340.1	Tcp10a	NP_033366.1	ILMN_2620555	000630113	S	31	GTTGGGGACGAGGGGTTTGTCCTGATGAGAGGCAGCGAAACCTTCCACAG					Mus musculus t-complex protein 10a (Tcp10a), mRNA.				D17Leh66A; D17Leh66aa; T66A-a; Tcp-10a	D17Leh66A; D17Leh66aa; T66A-a; Tcp-10a
Mus musculus	RefSeq	ILMN_214626	ILMN_214626	STS	NM_009293.1	NM_009293.1		20905	6678174	NM_009293.1	Sts	NP_033319.1	ILMN_2650049	006290373	S	2228	AGGACAGACTCGATGACGCCGCCCACTATAGAGGCCACGCCAACCACGAC					Mus musculus steroid sulfatase (Sts), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxyandrost-5-en-17-one 3-sulfate + H2O = 3-beta-hydroxyandrost-5-en-17-one + SO4(2-) (sulfate) [goid 4773] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISO]		
Mus musculus	RefSeq	ILMN_184774	ILMN_184774	V1RG8	NM_134209.1	NM_134209.1		171243	21717732	NM_134209.1	V1rg8	NP_598970.1	ILMN_1256776	005340187	S	657	CCACAGTGCTCAACAACTTTTGAAAGTCTTGCCTGAGGACAAAGCCACCC	7	-	12906771-12906820	7qA1	Mus musculus vomeronasal 1 receptor, G8 (V1rg8), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	Riken	ILMN_205086	ILMN_205086	D630015C01RIK	ri|D630015C01|PX00196H05|AK052657|3027					AK052657	D630015C01Rik		ILMN_2569879	003780541	S	2885	GCTATGTGGCCATCTGTTAGTGGCCTCTGAGCTCCTTAATCACTAGAGGG										
Mus musculus	RefSeq	ILMN_191435	ILMN_243652	UBAP2L	NM_153489.1	NM_153489.1		74383	23943917	NM_153489.1	Ubap2l	NP_705693.1	ILMN_2479024	001230438	S	2950	GTCAGTGTGAATGCCTCGGCTACCCCTTTCCAACAGCCAAGTGGATATGG	3	-	89812185-89812234	3qF1	Mus musculus ubiquitin associated protein 2-like (Ubap2l), transcript variant 2, mRNA.				mKIAA0144; 3110083O19Rik; C77168; MGC25504; A430103N23Rik; Nice-4; 4932431F02Rik	mKIAA0144; 3110083O19Rik; C77168; MGC25504; A430103N23Rik; Nice-4; 4932431F02Rik
Mus musculus	MEEBO	ILMN_218508	ILMN_218508	TCAP	scl40941.2_163	NM_011540.1			6755725	NM_011540.1	Tcap		ILMN_2696682	000990253	S	902	CCCCAGCACCCTCTGGTAGCACTGCAATAAATGCTCAGCCATGTTCCACG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence ISA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	Riken	ILMN_204221	ILMN_204221	A730049L07RIK	ri|A730049L07|PX00150P16|AK043034|3156					AK043034	A730049L07Rik		ILMN_2563312	004760446	S	2677	CACTGTGTTGTAACTGTGTCACAGTTTCCGGGACACGTTTCTTTGTGTCC										
Mus musculus	MEEBO	ILMN_193415	ILMN_193415	1700072H12RIK	scl14178.1.1_161						1700072H12Rik		ILMN_2496973	003990750	S	15	CAAGCCATATTGATTCCTGACAGAACTCTGAAACAAATACATGACTCCCA										
Mus musculus	RefSeq	ILMN_216374	ILMN_216374	CHMP5	NM_029814.1	NM_029814.1		76959	13386441	NM_029814.1	Chmp5	NP_084090.1	ILMN_2670352	000020274	S	1023	CTCTGAATTCTATGGTAGTGTAAGTACAGTCTCAGTGTGCTGATACATTG	4	+	40911986-40912035	4qA5	Mus musculus chromatin modifying protein 5 (Chmp5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The directed movement of substances from endosomes to lysosomes [goid 8333] [evidence IMP]; Any process that modulates the frequency, rate, or extent of receptor recyling [goid 1919] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-28I8.4; AW545668; 2210412K09Rik	RP23-28I8.4; AW545668; 2210412K09Rik
Mus musculus	RefSeq	ILMN_198981	ILMN_198981	LOC331356	XM_285611.2	XM_285611.2			38090317	XM_285611.2	LOC331356		ILMN_2533623	001430364	S	580	CACACTGGGAAGAAGCCCTACCACTGCCCACCTGGTGGCTGCAACTTCAG										
Mus musculus	Riken	ILMN_205664	ILMN_205664	B930054I22RIK	ri|B930054I22|PX00164F18|AK047386|2219					AK047386	B930054I22Rik		ILMN_1219658	004260242	S	1649	TAGCTTGAAGAACCCTGCATGGCCAGCTTCCCCTTGGCCTACATGAATTC										
Mus musculus	Riken	ILMN_204391	ILMN_204391	SKP2	ri|9930035M16|PX00120L13|AK037002|1379					AK037002	Skp2		ILMN_1243441	003450435	S	1043	ATGAAAGGTGCCCGTATCTTGCCTGGCTCGTTGGGCCTGCTAAACAAGGG						A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IPI]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187060	ILMN_238166	SP100	NM_013673.3	NM_013673.3		20684	141803419	NM_013673.3	Sp100	NP_038701.2	ILMN_2440814	006250204	S	1574	CCAGACCTCCGGGAGCACATGTGGTTAAACAAAATCAAGAATAGGCTGAA	1	+	87604572-87604621	1qC5	Mus musculus nuclear antigen Sp100 (Sp100), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	A430075G10Rik	A430075G10Rik
Mus musculus	RefSeq	ILMN_213072	ILMN_213072	SMAP2	NM_133716.2	NM_133716.2		69780	31981559	NM_133716.2	Smap2	NP_598477.2	ILMN_3045152	007040400	I	59	AACCGAGGCGGGAAGCACAGCGGGCAGACCCTCAACACTCGGGGTCAAGT	4	-	120689744-120689793	4qD2.2	Mus musculus stromal membrane-associated GTPase-activating protein 2 (Smap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	Smap2; RP23-57M16.1; AA408614; 1810031K02Rik	Smap2; RP23-57M16.1; AA408614; 1810031K02Rik
Mus musculus	RefSeq	ILMN_213072	ILMN_213072	SMAP2	NM_133716.2	NM_133716.2		69780	31981559	NM_133716.2	Smap2	NP_598477.2	ILMN_1222682	002470224	S	2417	GGATCTGGCCTGTGACTAGAAGACCAACCCCTACGAGGAAATGTGGAGCT	4	-	120641360-120641409	4qD2.2	Mus musculus stromal membrane-associated GTPase-activating protein 2 (Smap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	Smap2; RP23-57M16.1; AA408614; 1810031K02Rik	Smap2; RP23-57M16.1; AA408614; 1810031K02Rik
Mus musculus	RefSeq	ILMN_213072	ILMN_213072	SMAP2	NM_133716.2	NM_133716.2		69780	31981559	NM_133716.2	Smap2	NP_598477.2	ILMN_3120652	001400523	A	2736	GGCAGAGAGCCTGGACAGCTTTCTCTCTCAGCCATTGTTCACCCCACTTG	4	-	120641041-120641090	4qD2.2	Mus musculus stromal membrane-associated GTPase-activating protein 2 (Smap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	Smap2; RP23-57M16.1; AA408614; 1810031K02Rik	Smap2; RP23-57M16.1; AA408614; 1810031K02Rik
Mus musculus	MEEBO	ILMN_185014	ILMN_185014	2700082O15RIK	scl20508.9.1_59						2700082O15Rik		ILMN_2423481	007150736	S	10	TCTGATTTGTTTATTTCTAAATCCTGTGAGTTCTTTTTGTAAATTGTTGG										
Mus musculus	MEEBO	ILMN_189726	ILMN_189726	4933413G19RIK	scl071149.3_21				51712675	XM_132869	4933413G19Rik		ILMN_1233867	004070592	S	649	CAGCCTCATTACCAGGAAAAGGTCCTGAAACTGGCTCGGCTGCCCACGGT										
Mus musculus	MEEBO	ILMN_189726	ILMN_189726	4933413G19RIK	scl071149.3_21				51712675	XM_132869	4933413G19Rik		ILMN_1241469	005340403	S	15	CGAGGAAGAGGAAGTCATCTGCTACGCTTCGCTGAGTTCGGCGGTCTTCC										
Mus musculus	RefSeq	ILMN_189864	ILMN_189864	UCK1	NM_011675.1	NM_011675.1		22245	33468946	NM_011675.1	Uck1	NP_035805.1	ILMN_2970429	000510301	S	1578	TCTCCAGCCAGGGAGCACTTCAGTGCAGAGGCAGGTGACCGTGGCTGCCT	2	-	32110801-32110850	2qB	Mus musculus uridine-cytidine kinase 1 (Uck1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + uridine = ADP + UMP [goid 4849] [evidence IEA]	URK1; Umpk	URK1; Umpk
Mus musculus	RefSeq	ILMN_189864	ILMN_189864	UCK1	NM_011675.1	NM_011675.1		22245	33468946	NM_011675.1	Uck1	NP_035805.1	ILMN_1254231	004200132	S	8	GTGGGCGGGAGCGGGCAGAGTCGGTGAATGTATGTCCGTCGCTCCGGATA	2	-	32115524-32115536:32115537-32115573	2qB	Mus musculus uridine-cytidine kinase 1 (Uck1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + uridine = ADP + UMP [goid 4849] [evidence IEA]	URK1; Umpk	URK1; Umpk
Mus musculus	RefSeq	ILMN_189864	ILMN_189864	UCK1	NM_011675.1	NM_011675.1		22245	33468946	NM_011675.1	Uck1	NP_035805.1	ILMN_1226366	002600050	S	1854	GGCTGGTTTTGTTGAACTGAAACCCCTCTTTGGAGGGAGAATCAATAAAT	2	-	32110525-32110574	2qB	Mus musculus uridine-cytidine kinase 1 (Uck1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + uridine = ADP + UMP [goid 4849] [evidence IEA]	URK1; Umpk	URK1; Umpk
Mus musculus	RefSeq	ILMN_189864	ILMN_189864	UCK1	NM_011675.1	NM_011675.1		22245	33468946	NM_011675.1	Uck1	NP_035805.1	ILMN_2479666	003610719	S	24	AGAGTCGGTGAATGTATGTCCGTCGCTCCGGATATGGCTTCGGCGGGAGG	2	-	32115508-32115536:32115537-32115557	2qB	Mus musculus uridine-cytidine kinase 1 (Uck1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + uridine = ADP + UMP [goid 4849] [evidence IEA]	URK1; Umpk	URK1; Umpk
Mus musculus	RefSeq	ILMN_212093	ILMN_212093	VPS72	NM_009336.2	NM_009336.2		21427	83921606	NM_009336.2	Vps72	NP_033362.2	ILMN_1225831	003130184	S	921	AAGGTCCCGGTGCGGGAGGTCTGCCCAGTGACCCACCGTCCAGCTTTGTA	3	+	94926458-94926507	3qF2.1	Mus musculus vacuolar protein sorting 72 (yeast) (Vps72), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Tcfl1; YL-1	Tcfl1; YL-1
Mus musculus	MEEBO	ILMN_186636	ILMN_186636	2610001E17RIK	scl0001808.1_18				23956171	NM_026439	2610001E17Rik		ILMN_2437216	000990619	S	20	TTCACTTTCAGGAAGATCCCTGTGGCAACCAAGGACCGGCACACACAGAC										
Mus musculus	RefSeq	ILMN_218344	ILMN_246190	GPR158	NM_001004761.1	NM_001004761.1		241263	52350562	NM_001004761.1	Gpr158	NP_001004761.1	ILMN_1227221	000520010	S	6871	CCCGACAGTTGTCTTGTATTTGCTTCCTAGGTTTCTGCATGCGAGTGGTG	2	+	21751899-21751948	2qA3	Mus musculus G protein-coupled receptor 158 (Gpr158), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mKIAA1136; 5330427M13Rik; KIAA1136	mKIAA1136; 5330427M13Rik; KIAA1136
Mus musculus	RefSeq	ILMN_246190	ILMN_246190	GPR158	NM_001004761.1	NM_001004761.1		241263	52350562	NM_001004761.1	Gpr158	NP_001004761.1	ILMN_2824971	004570324	S	6896	CCTAGGTTTCTGCATGCGAGTGGTGATAGGTAGGACTGACAACACACTGC	2	+	21751924-21751973	2qA3	Mus musculus G protein-coupled receptor 158 (Gpr158), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mKIAA1136; 5330427M13Rik; KIAA1136	mKIAA1136; 5330427M13Rik; KIAA1136
Mus musculus	RefSeq	ILMN_216954	ILMN_216954	PQBP1	NM_019478.3	NM_019478.3		54633	118130717	NM_019478.3	Pqbp1	NP_062351.2	ILMN_2883110	003060300	S	651	CGACGAGCCGCAAAGATGAAGAATTAGACCCCATGGACCCCAGCTCATAC	X	-	7472304-7472353	XqA1.1	Mus musculus polyglutamine binding protein 1 (Pqbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Sfc2; PQBP-1	Sfc2; PQBP-1
Mus musculus	RefSeq	ILMN_216396	ILMN_216396	SPO11	NM_012046.2	NM_012046.2		26972	145312257	NM_012046.2	Spo11	NP_036176.1	ILMN_2777019	006660292	S	1612	GGTATTTTCCTCTAGTACTTTCTTTTGCCTCATGGTATAGGTGCCTTGCC				2qH3	Mus musculus sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae) (Spo11), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AI449549	AI449549
Mus musculus	RefSeq	ILMN_216396	ILMN_216396	SPO11	NM_012046.2	NM_012046.2		26972	145312257	NM_012046.2	Spo11	NP_036176.1	ILMN_2670671	006290039	S	195	TTACAGCTATAGAAAATATTATCCAAGACATAATCAAAAGCTTGGCAAGA				2qH3	Mus musculus sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae) (Spo11), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AI449549	AI449549
Mus musculus	Riken	ILMN_207403	ILMN_207403	G430064E20RIK	ri|G430064E20|PH00001F24|AK090020|1695					AK090020	G430064E20Rik		ILMN_1227948	000840301	S	1450	AGCGGCCACAGTTAGAACGCACACTCATGCTGATTCCTAGCGCCTCTGGG										
Mus musculus	RefSeq	ILMN_186133	ILMN_318877	LOC100043126	XM_001480068.1	XM_001480068.1		100043126	149250465	XM_001480068.1	LOC100043126	XP_001480118.1	ILMN_2432886	007650075	S	52	GCTCAGAACTCCAAACATGGATTTAGTCACCTATGATGACGTGCATGTGA	2	-	175694814-175694845:175702719-175702736	2qH4	PREDICTED: Mus musculus similar to novel KRAB box and zinc finger, C2H2 type domain containing protein (LOC100043126), mRNA.					
Mus musculus	RefSeq	ILMN_235377	ILMN_235377	TMEM107	NM_025838.1	NM_025838.1		66910	21539608	NM_025838.1	Tmem107	NP_080114.1	ILMN_3163211	006550768	A	457	CCACGTACTGGTACATTTTTACCTTCTGCAGCGCCTTCCCAGCTGTCACT	11	+	68885991-68886021:68886248-68886266	11qB3	Mus musculus transmembrane protein 107 (Tmem107), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-19I2.5; 2810049P21Rik; 1110004B13Rik	RP23-19I2.5; 2810049P21Rik; 1110004B13Rik
Mus musculus	RefSeq	ILMN_221748	ILMN_330431	AW822252	XM_001474711.1	XM_001474711.1		331578	149271601	XM_001474711.1	AW822252	XP_001474761.1	ILMN_2739816	003520289	S	830	GCCAGCGATGTCTTCTACACTATCCTGGGACCAATGGTGTACTCTTCGCT	X	-	51009260-51009309	XqA5	PREDICTED: Mus musculus expressed sequence AW822252 (AW822252), mRNA.					
Mus musculus	RefSeq	ILMN_221748	ILMN_330431	AW822252	XM_001474711.1	XM_001474711.1		331578	149271601	XM_001474711.1	AW822252	XP_001474761.1	ILMN_2744956	001940196	S	685	CATGTTGAACCTCAAGAGTAAGGGGAAATGAAACCATCTCTACAGGCCAC	X	-	51016528-51016551:51016552-51016577	XqA5	PREDICTED: Mus musculus expressed sequence AW822252 (AW822252), mRNA.					
Mus musculus	MEEBO	ILMN_187825	ILMN_187825	NDUFB2	scl30167.5_55				13386095	NM_026612	Ndufb2		ILMN_1243847	000160647	S	16	CTGGATAGACTCCAAACCTAAGACTACTCCTAACCCCAAGAGGTTGTGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]			
Mus musculus	Riken	ILMN_205059	ILMN_205059	D130071O13RIK	ri|D130071O13|PX00186A12|AK051750|2423					AK051750	D130071O13Rik		ILMN_1218839	002450739	S	2150	AGCCTGGGTTTGTCCCCCGAGGTTCCTAATGGCTGGAGGGAGCTGTCATT										
Mus musculus	RefSeq	ILMN_212170	ILMN_212170	PPY	NM_008918.1	NM_008918.1		19064	6679452	NM_008918.1	Ppy	NP_032944.1	ILMN_2856567	001030369	S	222	CCTAGGTATGGGAAGAGAGCCGAGGAGGAGAACACAGGTGGACTTCCTGG	11	-	101961552-101961597:101961835-101961838	11qD	Mus musculus pancreatic polypeptide (Ppy), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with a G-protein-coupled receptor [goid 1664] [evidence IDA]	IGSPP; MGC123521; PP; AV061413	IGSPP; MGC123521; PP; AV061413
Mus musculus	RefSeq	ILMN_205510	ILMN_311457	LOC100041516	XR_031127.1	XR_031127.1		100041516	149275209	XR_031127.1	LOC100041516		ILMN_1221526	007150674	S	3741	AGGCTTGAGTTCCTTCACCAAACTCTGCCTGGCTCATATTTTGGGGCCAA	Un|NT_166434.1	-	25965-26014		PREDICTED: Mus musculus similar to 4933409K07Rik protein (LOC100041516), misc RNA.					
Mus musculus	RefSeq	ILMN_209205	ILMN_209205	RABL2A	NM_026817.3	NM_026817.3		68708	146134335	NM_026817.3	Rabl2a	NP_081093.2	ILMN_2742942	004280327	S	571	GATGACTCAAAAGAATTTCAGTTTTGCCAAGAAGTTCTCCCTGCCCCTGT				15qE3	Mus musculus RAB, member of RAS oncogene family-like 2A (Rabl2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AW549303; 1110031N17Rik	AW549303; 1110031N17Rik
Mus musculus	RefSeq	ILMN_209205	ILMN_209205	RABL2A	NM_026817.3	NM_026817.3		68708	146134335	NM_026817.3	Rabl2a	NP_081093.2	ILMN_2593578	007040767	S	1395	CACCTTACTGTTCCCCACCACGTGAACAAAAACTGCCTCCATCTCAGGGT				15qE3	Mus musculus RAB, member of RAS oncogene family-like 2A (Rabl2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AW549303; 1110031N17Rik	AW549303; 1110031N17Rik
Mus musculus	RefSeq	ILMN_202556	ILMN_319966	LOC100047273	XM_001478032.1	XM_001478032.1		100047273	149252665	XM_001478032.1	LOC100047273	XP_001478082.1	ILMN_1244451	006380594	S	154	AGTGCCCCCTTGCCAAATGAACCGTGTAACTGCTGATAGTCCCACACAGG					PREDICTED: Mus musculus hypothetical protein LOC100047273 (LOC100047273), mRNA.					
Mus musculus	RefSeq	ILMN_212180	ILMN_312865	LOC100047393	XM_001478170.1	XM_001478170.1		100047393	149259285	XM_001478170.1	LOC100047393	XP_001478220.1	ILMN_1241606	004280592	S	1445	GGGAAGTTGAAGTCCTGTCTTACTGGCTTCCTTCAGGAATATGGGCTGTC					PREDICTED: Mus musculus similar to Amyloid beta precursor protein binding protein 1 (LOC100047393), mRNA.					
Mus musculus	RefSeq	ILMN_199582	ILMN_228483	EG623370	XM_915476.1	XM_915476.1		623370	82800015	XM_915476.1	EG623370	XP_920569.1	ILMN_1237297	003710592	S	757	GCTCGGATGGTGTACGTGGTTTTGAATGAAGCACCTGTTATGGTGCCCGC				2qB	PREDICTED: Mus musculus predicted gene, EG623370 (EG623370), mRNA.					
Mus musculus	RefSeq	ILMN_208845	ILMN_208845	RGR	NM_021340.3	NM_021340.3		57811	141802330	NM_021340.3	Rgr	NP_067315.1	ILMN_2590082	001230739	S	1497	ATTGGACAAGAGCATGCAGGTTAGGTGTCCCCTGACCACCAGCACCAGCA	14	-	37850788-37850837	14qB	Mus musculus retinal G protein coupled receptor (Rgr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185591	ILMN_185591	SCL0003669.1_14	scl0003669.1_14	AK036090.1			26331143	AK036090.1	scl0003669.1_14		ILMN_2428320	004560132	S	20	TCCGGGGACAGCATCCAACAGCACGTGAAGATCACCCCAGTGATTGGCCA										
Mus musculus	MEEBO	ILMN_189977	ILMN_189977	BNIPL	scl22886.1.1_16						Bnipl		ILMN_1223433	002970300	S	11	GGTCACAGGTCTGAATTTACTGAGAGTGAAAACACAGGTTTTGACAGCAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_204785	ILMN_204785	CSTN2-PENDING	ri|C130053D20|PX00170A07|AK048369|2894					AK048369	Cstn2-pending		ILMN_1214046	002140008	S	2630	CTCCCATATAAGGATAGCCTAAAGGTTGGCAAGGCTGTCACCACCCAGCC										
Mus musculus	MEEBO	ILMN_224036	ILMN_224036	OLFR750	scl0404319.1_40				46430567	NM_207558	Olfr750		ILMN_2773535	005080753	S	646	ATTACTGGTGCGTCCTATGGCCACATAGTCCTGGCGGTCCTGCGCATCCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_214924	ILMN_214924	DOM3Z	NM_033613.1	NM_033613.1		112403	15809031	NM_033613.1	Dom3z	NP_291091.1	ILMN_1233838	003450397	S	1283	CCTGCCCTCATGGTATGTGGAGACTATGACCCAAGACCTCCCACCACTCT	17	+	34974869-34974918	17qB1	Mus musculus DOM-3 homolog Z (C. elegans) (Dom3z), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	NG6	NG6
Mus musculus	RefSeq	ILMN_214924	ILMN_214924	DOM3Z	NM_033613.1	NM_033613.1		112403	15809031	NM_033613.1	Dom3z	NP_291091.1	ILMN_2694156	007150170	S	1285	CTGCCCTCATGGTATGTGGAGACTATGACCCAAGACCTCCCACCACTCTC	17	+	34974871-34974920	17qB1	Mus musculus DOM-3 homolog Z (C. elegans) (Dom3z), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	NG6	NG6
Mus musculus	RefSeq	ILMN_217800	ILMN_241530	EDEM3	NM_001039644.1	NM_001039644.1		66967	88900436	NM_001039644.1	Edem3	NP_001034733.1	ILMN_2687755	000770731	S	6224	CTATGTACTGTGATGTAAAAGTCTGGGCAAAATGTATATAATCCTTGTAT	1	+	153669074-153669123	1qG2	Mus musculus ER degradation enhancer, mannosidase alpha-like 3 (Edem3), mRNA. XM_924412 XM_924415	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]; Catalysis of the hydrolysis of the terminal alpha-glucosyl-(1,3)-mannosyl unit from Glc-Man(9)-(GlcNAc)(2) oligosaccharide component of the glycoprotein produced in the Golgi membrane [goid 4569] [evidence IDA]	2310050N11Rik	2310050N11Rik
Mus musculus	RefSeq	ILMN_210819	ILMN_230213	3300005D01RIK	XM_987107.2	XM_987107.2		78512	149268291	XM_987107.2	3300005D01Rik	XP_992201.2	ILMN_1246953	001510220	S	199	CGACCAAAACCTGTGCATTCAGAAAGTACCGACCACAGCTTCCTCCCTGC	17	+	5802745-5802794	17qA1	PREDICTED: Mus musculus RIKEN cDNA 3300005D01 gene (3300005D01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222314	ILMN_222314	NDUFB11	NM_019435.2	NM_019435.2		104130	31980892	NM_019435.2	Ndufb11	NP_062308.1	ILMN_2747885	005670364	S	165	CCGGGGATCTATTTAGCAAGGTAAGGGCGGAGCGACAAAAATCGCGCTGG	X	-	20194466-20194515	XqA1.3	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11 (Ndufb11), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		D5Bwg0566e; NP15.6; D5Bwg0577e; Np15	D5Bwg0566e; NP15.6; D5Bwg0577e; Np15
Mus musculus	RefSeq	ILMN_222314	ILMN_222314	NDUFB11	NM_019435.2	NM_019435.2		104130	31980892	NM_019435.2	Ndufb11	NP_062308.1	ILMN_2747886	004120603	S	167	CGGGGATCTATTTAGCAAGGTAAGGGCGGAGCGACAAAAATCGCGCTGGG	X	-	20194464-20194513	XqA1.3	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11 (Ndufb11), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		D5Bwg0566e; NP15.6; D5Bwg0577e; Np15	D5Bwg0566e; NP15.6; D5Bwg0577e; Np15
Mus musculus	RefSeq	ILMN_208634	ILMN_208634	TIMP4	NM_080639.3	NM_080639.3		110595	110625887	NM_080639.3	Timp4	NP_542370.3	ILMN_2665133	002470608	S	330	GCCAAGGATATTCAGTATGTCTACACGCCATTTGACTCTTCCCTCTGTGG	6	-	115199890-115199939	6qE3	Mus musculus tissue inhibitor of metalloproteinase 4 (Timp4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TIMP-4	TIMP-4
Mus musculus	RefSeq	ILMN_200415	ILMN_200415	LOC381700	XM_355672.1	XM_355672.1			38081759	XM_355672.1	LOC381700		ILMN_1253733	001260768	S	5	GGACAGTTAGAGGTCGCTGGGTTCAGCAGCCAGGGGTGCGGGGGAAATTT										
Mus musculus	RefSeq	ILMN_221066	ILMN_221066	HRH4	NM_153087.1	NM_153087.1		225192	23346506	NM_153087.1	Hrh4	NP_694727.1	ILMN_2950199	003610102	S	1066	CGCCCCAAATCGGTGTGGTACAGCATTGCCTTCTGGCTGCAATGGTTCAA	18	+	13180920-13180969	18qA1	Mus musculus histamine receptor H4 (Hrh4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with histamine to initiate a change in cell activity. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans [goid 4969] [evidence IDA]	H4R; GPCR105; HH4R; GPRv53; H4; AXOR35; MGC130500; BG26	H4R; GPCR105; HH4R; GPRv53; H4; AXOR35; MGC130500; BG26
Mus musculus	RefSeq	ILMN_248879	ILMN_248879	DOK6	NM_001039173.1	NM_001039173.1		623279	85677490	NM_001039173.1	Dok6	NP_001034262.1	ILMN_3161911	004060440	S	882	GTCCAGGGCACAGACATTTCCCAGCTATGCTCCAGAACAGAGTGAAGAGG	18	-	89470591-89470640	18qE4	Mus musculus docking protein 6 (Dok6), mRNA.			Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]	Dok-6	Dok-6
Mus musculus	RefSeq	ILMN_196664	ILMN_230671	C330018D20RIK	XM_914864.3	XM_914864.3		77422	149270062	XM_914864.3	C330018D20Rik	XP_919957.2	ILMN_2525289	007040612	S	324	AGCTCTGCCTGTGTTGACCTTATTCACAAAGGCCCCATGCCCGCTGTGTG				18qD3	PREDICTED: Mus musculus RIKEN cDNA C330018D20 gene, transcript variant 3 (C330018D20Rik), mRNA.		A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	Riken	ILMN_203369	ILMN_203369	9330168G06RIK	ri|9330168G06|PX00106M20|AK034247|1822					AK034247	9330168G06Rik		ILMN_1246293	000130129	S	1662	GAACTGCTTGTCCTGTGGTCTCCACTACAGCTACCGAGGGAGATGCCTTG										
Mus musculus	Riken	ILMN_201618	ILMN_201618	MRPL15	ri|0710007O18|R000005G24|AK003026|1003					AK003026	Mrpl15		ILMN_1244650	004610603	S	657	CTGGTGCCCTATTACACCGATGCAAAAAACCGGGGCTACCTGGCTGACCC						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]; The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome [goid 2] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]		
Mus musculus	Riken	ILMN_203854	ILMN_203854	A630007M06RIK	ri|A630007M06|PX00144C04|AK041411|2317					AK041411	A630007M06Rik		ILMN_1221371	006450187	S	2216	AGCACTTAAGAGGAAGGGGTAGGCAGATAAGGAGTTCAAGGTCCCACGTG										
Mus musculus	RefSeq	ILMN_211264	ILMN_225628	5830417I10RIK	XM_001000961.1	XM_001000961.1		76022	94418371	XM_001000961.1	5830417I10Rik	XP_001000961.1	ILMN_1213497	005810292	S	2012	CCTTGCAAAAAGAGGATGAAGTGAACGATGAAGCCGTTGGAGATGCTGCC				3qF1	PREDICTED: Mus musculus RIKEN cDNA 5830417I10 gene (5830417I10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211264	ILMN_225628	5830417I10RIK	XM_001000961.1	XM_001000961.1		76022	94418371	XM_001000961.1	5830417I10Rik	XP_001000961.1	ILMN_2614110	003360068	S	2229	GCTGTTGCTGTATGATGAGGACATTCTCGACCGGGACCCACTCAGGGAGC				3qF1	PREDICTED: Mus musculus RIKEN cDNA 5830417I10 gene (5830417I10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_191551	ILMN_252203	9930013L23RIK	NM_030728.3	NM_030728.3		80982	142373414	NM_030728.3	9930013L23Rik	NP_109653.2	ILMN_1216436	000060474	S	4859	GAGACTTCAGCTGGCACACTGGGACAGGGACTAGGTGGATCCTGTTTGTC	7	-	91083569-91083618	7qD3	Mus musculus RIKEN cDNA 9930013L23 gene (9930013L23Rik), mRNA.				12H19.01.T7; 6330404C01Rik; AY007814	12H19.01.T7; 6330404C01Rik; AY007814
Mus musculus	Riken	ILMN_204212	ILMN_204212	A730036D20RIK	ri|A730036D20|PX00150E07|AK042894|577					AK042894	A730036D20Rik		ILMN_2563245	002810470	S	279	GAGTGTGAGCCGCCTCGGGTGGGTGCTGGGAAAGAATTCAAGTGCTTCAC										
Mus musculus	RefSeq	ILMN_209674	ILMN_209674	EMP2	NM_007929.2	NM_007929.2		13731	111154058	NM_007929.2	Emp2	NP_031955.2	ILMN_2598103	005820204	S	3161	GAGGGTGTGAGCGAGAACAGATCCACCCTTCTCCTAGGTAGGATCAGCTC	16	-	10282071-10282120	16qA1	Mus musculus epithelial membrane protein 2 (Emp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			XMP	XMP
Mus musculus	MEEBO	ILMN_184165	ILMN_184165	SESTD1	scl19093.1_10				31341971	NM_175465	Sestd1		ILMN_1240007	005260670	S	1	CGAGTGCCTTACTAACGGGGCATTCTTAGAATTGTAAGGAGGGTTAATCA								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_184165	ILMN_184165	SESTD1	scl19093.1_10				31341971	NM_175465	Sestd1		ILMN_2676770	005490347	S	2352	CCTAAGAGAAGGAATTGTAACCACCGCACTGAGTCCTCGCTTTCACGCCA								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209335	ILMN_209335	MSTN	NM_010834.2	NM_010834.2		17700	118130172	NM_010834.2	Mstn	NP_034964.1	ILMN_1231247	000460386	S	2268	CAGAGTGAATTAGCAGATTCAATAGTGGTCTTAAAACTCTGTATGTTAAG	1	+	53124509-53124558	1qC1.1	Mus musculus myostatin (Mstn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MGC124261; MGC124263; MGC124262; compact; Cmpt; Gdf8; Mstn	MGC124261; MGC124263; MGC124262; compact; Cmpt; Gdf8; Mstn
Mus musculus	RefSeq	ILMN_186811	ILMN_240696	KRTAP6-1	NM_010672.3	NM_010672.3		16700	113374194	NM_010672.3	Krtap6-1	NP_034802.1	ILMN_2694230	006980754	S	417	TTCTGTGTCTGATATGTCCAATCAATCGTTTTGAAAATTTGTTGTAAAAA	16	+	89032360-89032409	16qC3.3	Mus musculus keratin associated protein 6-1 (Krtap6-1), mRNA.				HGTpII.2; HGTpII.1	HGTpII.2; HGTpII.1
Mus musculus	MEEBO	ILMN_219448	ILMN_219448	RAB36	scl38769.10_387	XM_125709.3			28497655	XM_125709.3	Rab36		ILMN_1237019	005490307	S	2352	AACTCAGCAGTGGCCAAACATCAGAGAGCGCTGACCTATCTCCCTGTTCG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	Riken	ILMN_206671	ILMN_206671	C230016C14RIK	ri|C230016C14|PX00174O06|AK082159|972					AK082159	C230016C14Rik		ILMN_1222589	004070743	S	361	GAAGAAACAAGGAGACACACACACACACACACATACATTTGCAGGGCTGG										
Mus musculus	RefSeq	ILMN_200229	ILMN_200229	LOC386005	XM_359031.1	XM_359031.1			38081009	XM_359031.1	LOC386005		ILMN_2538029	006550674	S	1050	ACGCAGAAGTGGATGCTCACAGTCAGCTATTGGATGGAACACAGGGCCCC										
Mus musculus	RefSeq	ILMN_210294	ILMN_210294	MYSM1	NM_177239.2	NM_177239.2		320713	50980310	NM_177239.2	Mysm1	NP_796213.2	ILMN_2717487	001440220	S	6349	CCCCGACCAAATCAGGAGGAAATAAAAGCATCCAAGAGGAACTTAAAAGG	4	-	94609752-94609801	4qC5	Mus musculus myb-like, SWIRM and MPN domains 1 (Mysm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C130067A03Rik; C530050H10Rik; RP23-135A21.2	C130067A03Rik; C530050H10Rik; RP23-135A21.2
Mus musculus	RefSeq	ILMN_210294	ILMN_210294	MYSM1	NM_177239.2	NM_177239.2		320713	50980310	NM_177239.2	Mysm1	NP_796213.2	ILMN_3044588	004290010	I	400	GAGAAAGAGCTGTTTGAACAAGGACTGGCTAAATTTGGCCGAAGGTGGAC	4	-	94634635-94634659:94635671-94635695	4qC5	Mus musculus myb-like, SWIRM and MPN domains 1 (Mysm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C130067A03Rik; C530050H10Rik; RP23-135A21.2	C130067A03Rik; C530050H10Rik; RP23-135A21.2
Mus musculus	RefSeq	ILMN_210294	ILMN_210294	MYSM1	NM_177239.2	NM_177239.2		320713	50980310	NM_177239.2	Mysm1	NP_796213.2	ILMN_3119954	004830110	A	6647	AGTCAGGGAGCTCTCCAGTGCTCAAGGTTAGCCTGGAACAGGAGGACTAC	4	-	94609454-94609503	4qC5	Mus musculus myb-like, SWIRM and MPN domains 1 (Mysm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C130067A03Rik; C530050H10Rik; RP23-135A21.2	C130067A03Rik; C530050H10Rik; RP23-135A21.2
Mus musculus	RefSeq	ILMN_222633	ILMN_222633	PAIP1	NM_145457.3	NM_145457.3		218693	119943134	NM_145457.3	Paip1	NP_663432.1	ILMN_2752569	005560692	S	878	CAGGTTGGTCTTCGGGAACTGCTGAATGCTCTGTTTTCTAATCCTATGGA	13	+	120236564-120236613	13qD2.3	Mus musculus polyadenylate binding protein-interacting protein 1 (Paip1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_222633	ILMN_222633	PAIP1	NM_145457.3	NM_145457.3		218693	119943134	NM_145457.3	Paip1	NP_663432.1	ILMN_3065748	000270037	I	91	GAGCGCCGGCCTCCTCCATGAGGCCTGAGTGAGGCGCGGCGGTGACAGGC	13	+	120217804-120217853	13qD2.3	Mus musculus polyadenylate binding protein-interacting protein 1 (Paip1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_208953	ILMN_208953	PPP2CZ	scl22768.2.1_26	NM_027982.1			29611651	NM_027982.1	Ppp2cz		ILMN_2591134	002750369	S	398	GCTGCGAGGTTGTGTATGTGGAAAGTCGGAGGAGCAGGAGCGTTACAGGG										
Mus musculus	Riken	ILMN_204401	ILMN_204401	IGBP1	ri|A130069N07|PX00125E07|AK037993|1670					AK037993	Igbp1		ILMN_1212967	006650367	S	1216	CTGCCAGCACCCTGTGGCCCTAACACCCCAATTTGTCTAGGAGGTTCAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism [goid 9607] [evidence IEA]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]			
Mus musculus	RefSeq	ILMN_189535	ILMN_229388	DGKQ	NM_199011.1	NM_199011.1		110524	39841022	NM_199011.1	Dgkq	NP_950176.1	ILMN_2646438	005670220	S	4413	AGTGAGACTGTCTTTATGTGGAGTGTGTCCTGTGCACTGACTGGTCCTGT	5	-	109076145-109076194	5qF	Mus musculus diacylglycerol kinase, theta (Dgkq), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]	Dagk4; Dgkd; DAGK7; 110kDa; DAGK	Dagk4; Dgkd; DAGK7; 110kDa; DAGK
Mus musculus	RefSeq	ILMN_184155	ILMN_229388	DGKQ	NM_199011.1	NM_199011.1		110524	39841022	NM_199011.1	Dgkq	NP_950176.1	ILMN_1219240	000060327	S	4129	GTCCACAAGCCAAGTAATGACACACAGGAGAAGGCTCTGCACTGACTGGC	5	-	109076429-109076478	5qF	Mus musculus diacylglycerol kinase, theta (Dgkq), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]	Dagk4; Dgkd; DAGK7; 110kDa; DAGK	Dagk4; Dgkd; DAGK7; 110kDa; DAGK
Mus musculus	RefSeq	ILMN_229388	ILMN_229388	DGKQ	NM_199011.1	NM_199011.1		110524	39841022	NM_199011.1	Dgkq	NP_950176.1	ILMN_2972541	001710474	S	4080	GCCAGTCAGTGCAGAGCCTTCTCCTGTGTGTCATTACTTGGCTTGTGGAC	5	-	109076478-109076527	5qF	Mus musculus diacylglycerol kinase, theta (Dgkq), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]	Dagk4; Dgkd; DAGK7; 110kDa; DAGK	Dagk4; Dgkd; DAGK7; 110kDa; DAGK
Mus musculus	MEEBO	ILMN_184387	ILMN_184387	LEPREL1	scl48614.17_462				27734075	NM_173379	Leprel1		ILMN_1237255	003370390	S	1	GTGTAGGTTCACCCCCAGTGGTGATGGAAGAATGAATACCTTAAATTGCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-3-hydroxy-L-proline + succinate + CO2 [goid 19797] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200713	ILMN_200713	LOC384500	XM_357674.1	XM_357674.1			38085383	XM_357674.1	LOC384500		ILMN_2539741	003450682	S	168	TGAAGTGGAATCCAATTTCCTCGATCGGTGTCAGGCAATTGCAGTGGCTA										
Mus musculus	RefSeq	ILMN_218310	ILMN_218310	FAM101A	NM_028443.2	NM_028443.2		73121	142358197	NM_028443.2	Fam101a	NP_082719.1	ILMN_1244695	007100682	S	1430	AGAGGTGGAGATGTCCCTTTGTCTCAATTGTCCAGTAGCTAGAAACCTAC	5	+	125492697-125492746	5qF	Mus musculus family with sequence similarity 101, member A (Fam101a), mRNA.				cfm2; cfm	cfm2; cfm
Mus musculus	RefSeq	ILMN_195907	ILMN_228280	ADD1	NM_013457.2	NM_013457.2		11518	118129930	NM_013457.2	Add1	NP_038485.1	ILMN_2659063	000580494	S	399	CAGATTGCAGATTTCATGACTGCGAGTGTACCAAATGTCTACCCGGCAGC	5	+	34947420-34947469	5qB2	Mus musculus adducin 1 (alpha) (Add1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI256389	AI256389
Mus musculus	RefSeq	ILMN_261018	ILMN_261018	MLKL	NM_029005.1	NM_029005.1		74568	110626036	NM_029005.1	Mlkl	NP_083281.1	ILMN_3006767	000630025	S	1404	TCCCAACGGCCCTCTGTGGACGGAATCTTGGAGAGACTGTCTGCGGTTGA				8qE1	Mus musculus mixed lineage kinase domain-like (Mlkl), mRNA. XM_924589		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	9130019I15Rik	9130019I15Rik
Mus musculus	RefSeq	ILMN_202428	ILMN_256954	DMRTC1A	NM_001038616.1	NM_001038616.1		70887	84490370	NM_001038616.1	Dmrtc1a	NP_001033705.1	ILMN_1231881	006400162	S	409	ACACGTCACCAGCCCTGTGGCATGCCAGGTACTGCTGGAGAGAGGGGACT	X	-	100099080-100099102:100100089-100100115	XqD	Mus musculus DMRT-like family C1a (Dmrtc1a), transcript variant 3, mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		DMRTC1; 4921520P21Rik; RP23-76A20.9; Dmrt8.1; 1700030H14Rik	DMRTC1; 4921520P21Rik; RP23-76A20.9; Dmrt8.1; 1700030H14Rik
Mus musculus	RefSeq	ILMN_256954	ILMN_256954	DMRTC1A	NM_001038616.1	NM_001038616.1		70887	84490370	NM_001038616.1	Dmrtc1a	NP_001033705.1	ILMN_3144535	000780240	A	489	GCCTACCAGCTCTGGTTCTCTGCCTTCTGGACATCTGGATTGCATGTCCC	X	-	100099000-100099049	XqD	Mus musculus DMRT-like family C1a (Dmrtc1a), transcript variant 3, mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		DMRTC1; 4921520P21Rik; RP23-76A20.9; Dmrt8.1; 1700030H14Rik	DMRTC1; 4921520P21Rik; RP23-76A20.9; Dmrt8.1; 1700030H14Rik
Mus musculus	RefSeq	ILMN_219922	ILMN_256954	DMRTC1A	NM_001038616.1	NM_001038616.1		70887	84490370	NM_001038616.1	Dmrtc1a	NP_001033705.1	ILMN_1251046	006590132	S	681	TTTTTATGATGTAGAGCAATTACTTGGCTTTCCTATGTTCTTTACCCCCA	X	-	100098808-100098857	XqD	Mus musculus DMRT-like family C1a (Dmrtc1a), transcript variant 3, mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		DMRTC1; 4921520P21Rik; RP23-76A20.9; Dmrt8.1; 1700030H14Rik	DMRTC1; 4921520P21Rik; RP23-76A20.9; Dmrt8.1; 1700030H14Rik
Mus musculus	RefSeq	ILMN_214681	ILMN_214681	SYCN	NM_026716.2	NM_026716.2		68416	27754041	NM_026716.2	Sycn	NP_080992.2	ILMN_1232533	006290343	S	227	TATCTGCCCTCGGGCTGGTCTAACACTGCATCGTCTCTGGTAGTGGGCCA	7	+	29326130-29326179	7qA3	Mus musculus syncollin (Sycn), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]		1810038B08Rik; SYL; 0910001K16Rik	1810038B08Rik; SYL; 0910001K16Rik
Mus musculus	RefSeq	ILMN_256175	ILMN_256175	EG545758	NM_001024147.1	NM_001024147.1		545758	85701519	NM_001024147.1	EG545758	NP_001019318.1	ILMN_2896113	007560154	S	978	GTGTCCCAATATTGCTTACACCTGGATCAGCTAAAGTGCCGCGTCCTCTG	5	-	72861126-72861175	5qC3.2	Mus musculus predicted gene, EG545758 (EG545758), mRNA.					
Mus musculus	RefSeq	ILMN_220493	ILMN_220493	CPSF4	NM_178576.1	NM_178576.1		54188	30466246	NM_178576.1	Cpsf4	NP_848671.1	ILMN_2722778	006770397	S	864	CAGGACTCGGGCTGGAGCTGCAGGCATACCAGTCAGGGCTCATTTTGAGG	5	+	145434826-145434875	5qG2	Mus musculus cleavage and polyadenylation specific factor 4 (Cpsf4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC36996; 30kDa; C79664	MGC36996; 30kDa; C79664
Mus musculus	RefSeq	ILMN_198023	ILMN_198023	LOC231545	XM_144452.4	XM_144452.4			38080433	XM_144452.4	LOC231545		ILMN_1252912	003140088	S	1706	CTGGCGAGAAGCCCTATGAATGTGACCAATGTGCCTTAGCTTGTCATAGC										
Mus musculus	RefSeq	ILMN_201040	ILMN_201040	LOC381957	XM_355989.1	XM_355989.1			38088112	XM_355989.1	LOC381957		ILMN_1218458	005080324	S	549	CAGCTGACGGTGTCTTGCTTCAGCTCCTTCCTCCAGCAACAGCGCTTGCA										
Mus musculus	RefSeq	ILMN_221013	ILMN_221013	RPGRIP1L	NM_173431.2	NM_173431.2		244585	145976943	NM_173431.2	Rpgrip1l	NP_775607.2	ILMN_2729918	001470072	S	6660	AGAAGTGTGGGCTGAGACGTGGTCATGTGATTTGGGAGACTCTGCGTGCA				8qC5	Mus musculus Rpgrip1-like (Rpgrip1l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence ISA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence ISA]; The bundle of microtubules and associated proteins that forms the core of cilia in eukaryotic cells and is responsible for their movements [goid 35085] [evidence ISA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The specification of the characteristic structures of the mandibular segment following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized [goid 42305] [evidence IMP]; The specification of the characteristic structures of the maxillary segment following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized [goid 7382] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any process that modulates the frequency, rate or extent of smoothened signaling [goid 8589] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity) [goid 43584] [evidence IMP]; The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery [goid 60039] [evidence IMP]; The regionalization process that regulates the coordinated growth that establishes the non-random spatial arrangement of the neural tube [goid 21532] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the corpus callosum over time, from its formation to the mature structure. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provide communication between the right and left cerebral hemispheres [goid 22038] [evidence IMP]; The process whose specific outcome is the progression of the lateral ventricles over time, from the formation to the mature structure. The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle [goid 21670] [evidence IMP]; The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex [goid 21772] [evidence IMP]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]		1700047E16Rik; Ftm; 4931437C01	1700047E16Rik; Ftm; 4931437C01
Mus musculus	MEEBO	ILMN_193887	ILMN_193887	DYRK1A	scl48842.13_674				24418934	NM_007890	Dyrk1a		ILMN_2501357	004730563	S	20	ATCCTGTCGCCTATGTAAAGGGAAAAGACTTGTGAGACAGAGACATTGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence ISO]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	Riken	ILMN_203833	ILMN_203833	A230080D12RIK	ri|A230080D12|PX00130C20|AK038972|1149					AK038972	A230080D12Rik		ILMN_2560306	006840661	S	485	CCACCAGCATATTTCTTGCCAATATTTTGGTTCATCTGCATTCCAGCAAG										
Mus musculus	Riken	ILMN_203290	ILMN_203290	4432409M07RIK	ri|4432409M07|PX00011E11|AK014482|2391					AK014482	4432409M07Rik		ILMN_1224100	003930463	S	2226	TGAGAAAAGCGGAGGTGGGGAATGAGGAAGGGCAGGCAACGGGAAAGCCT										
Mus musculus	RefSeq	ILMN_199039	ILMN_199039	LOC380641	XM_358393.1	XM_358393.1			38090556	XM_358393.1	LOC380641		ILMN_1248058	006400768	S	426	TCCCCGGATGCGTGCTGGAGAGTCAGAGATCACAGAAGAATGTACCCACC										
Mus musculus	RefSeq	ILMN_209887	ILMN_331536	LOC100047316	XM_001476590.1	XM_001476590.1		100047316	149255622	XM_001476590.1	LOC100047316	XP_001476640.1	ILMN_1247185	006270072	S	58	CAGCTTCCTGCTAATCAGTGCCTCAGTCATACTGTCCAGAGGACAAATTG					PREDICTED: Mus musculus similar to anti-MOG Z12 variable light chain (LOC100047316), mRNA.					
Mus musculus	RefSeq	ILMN_209013	ILMN_331536	LOC100047316	XM_001476590.1	XM_001476590.1		100047316	149255622	XM_001476590.1	LOC100047316	XP_001476640.1	ILMN_1215825	002690538	S	201	GGTACCAGCAGAAGCCAGGCACCTCCCCCAAAAGATGGATTTATGACACA					PREDICTED: Mus musculus similar to anti-MOG Z12 variable light chain (LOC100047316), mRNA.					
Mus musculus	RefSeq	ILMN_210715	ILMN_210715	4921530L21RIK	NM_025733.1	NM_025733.1		66732	13385193	NM_025733.1	4921530L21Rik	NP_080009.1	ILMN_2840313	000610750	S	1080	CCTTATTGTCAGAAGCCTCAGAAGTTGATGTGCTCGATATTTGGTCCTGG	14	+	94765833-94765882	14qE2.1	Mus musculus RIKEN cDNA 4921530L21 gene (4921530L21Rik), mRNA.					
Mus musculus	MEEBO	ILMN_216956	ILMN_216956	HRMT1L2	scl015469.1_28	NM_019830.1			9790108	NM_019830.1	Hrmt1l2		ILMN_2677408	006480630	S	1084	TCAGCTGTGTGAGCTCTCTTGTTCCACCGACTACCGGATGCGCTGAGGAG										
Mus musculus	RefSeq	ILMN_199212	ILMN_199212	LOC380728	XM_354643.1	XM_354643.1			38091822	XM_354643.1	LOC380728		ILMN_2534442	000990343	S	2632	GAACTGGCCACAGAGGCAGCAGAGGAGGTGAAGGAAAAGGTCTGCAGGCT										
Mus musculus	RefSeq	ILMN_199185	ILMN_235669	LOC626150	XM_890719.3	XM_890719.3		626150	149261949	XM_890719.3	LOC626150	XP_895812.1	ILMN_1227265	006590162	S	33	CACCGGAAACAACTGTAAAGCACCCAGGAAACAACTGGCTACAAAAGCTG	11	-	61230235-61230284	11qB2	PREDICTED: Mus musculus similar to H3 histone, family 3A (LOC626150), mRNA.					
Mus musculus	MEEBO	ILMN_219953	ILMN_219953	ATF1	scl0011908.1_11	NM_007497.2			34328100	NM_007497.2	Atf1		ILMN_2715664	000160685	S	85	CTGGCAAGTGAGGAGTAAAGTCGGCGCCGCCTGGGACGGGGGAGTGGAGC						Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_220119	ILMN_220119	ARR3	NM_133205.2	NM_133205.2		170735	118131025	NM_133205.2	Arr3	NP_573468.1	ILMN_2726271	004590154	S	957	TCGACCTGGAATGAACAAGGAGCTTCTGGGGATCCTGGTGTCCTACAAAG	X	+	97812242-97812291	XqC3	Mus musculus arrestin 3, retinal (Arr3), mRNA.	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IGI]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IDA]	Interacting selectively with a phosphorylated protein [goid 51219] [evidence IDA]; Interacting selectively with an opsin, any of a group of hydrophobic, integral membrane glycoproteins located primarily in the disc membrane of rods or cones, involved in photoreception [goid 2046] [evidence IDA]	CAR; mCARFL; mCAR	CAR; mCARFL; mCAR
Mus musculus	RefSeq	ILMN_220119	ILMN_220119	ARR3	NM_133205.2	NM_133205.2		170735	118131025	NM_133205.2	Arr3	NP_573468.1	ILMN_2717844	002850438	S	594	GACCATTCGAAGCTTCTTTTTGTCATCTCAGCCCCTACAACTGCAGGCCT	X	+	97808909-97808958	XqC3	Mus musculus arrestin 3, retinal (Arr3), mRNA.	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IGI]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IDA]	Interacting selectively with a phosphorylated protein [goid 51219] [evidence IDA]; Interacting selectively with an opsin, any of a group of hydrophobic, integral membrane glycoproteins located primarily in the disc membrane of rods or cones, involved in photoreception [goid 2046] [evidence IDA]	CAR; mCARFL; mCAR	CAR; mCARFL; mCAR
Mus musculus	RefSeq	ILMN_210720	ILMN_210720	CDKL1	NM_183294.1	NM_183294.1		71091	34304104	NM_183294.1	Cdkl1	NP_899117.1	ILMN_2852737	004070615	S	1321	GGAGACAACACAAACAGGAAGCTGGGGTCATTTGCCAGGACACGAAGGGG	12	-	70665771-70665820	12qC2	Mus musculus cyclin-dependent kinase-like 1 (CDC2-related kinase) (Cdkl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	4933411O17Rik; MGC144707; MGC144706	4933411O17Rik; MGC144707; MGC144706
Mus musculus	RefSeq	ILMN_260246	ILMN_260246	ZFP568	NM_001033355.1	NM_001033355.1		243905	85701843	NM_001033355.1	Zfp568	NP_001028527.1	ILMN_2795095	003460523	S	3955	GAGTTCGAAGCCAGCTAGGGCTATATAGAGAAACCCTGTCTTGAAAAACC	7	+	29733823-29733871	7qB1	Mus musculus zinc finger protein 568 (Zfp568), mRNA. XM_899378 XM_899382 XM_899389 XM_899395	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C80731; Gm1691	C80731; Gm1691
Mus musculus	Riken	ILMN_203244	ILMN_203244	E130102A02RIK	ri|E130102A02|PX00091E16|AK053486|1968					AK053486	E130102A02Rik		ILMN_1256322	004230220	S	1636	AGCTGGCAAAACCACACCTCCGCTAGAGCATGAGACAAATCACAGTCAGC										
Mus musculus	Riken	ILMN_207365	ILMN_207365	C130046K22RIK	ri|C130046K22|PX00666I16|AK081580|1998					AK081580	C130046K22Rik		ILMN_1216155	002120056	S	1734	TCTGCTGAGGGTCTCCAAACCTTGTTTATGCCAAGGGCTGGGGCTGGAGG										
Mus musculus	RefSeq	ILMN_187502	ILMN_249540	2500003M10RIK	NM_023215.5	NM_023215.5		66511	146149264	NM_023215.5	2500003M10Rik	NP_075704.2	ILMN_1228394	000160008	S	3090	CTCATGTGCTGCTCGTGCTGAAGTGCAGTTACCTTCCACTTAACTGGCTT				3qF1	Mus musculus RIKEN cDNA 2500003M10 gene (2500003M10Rik), mRNA.				C81330	C81330
Mus musculus	RefSeq	ILMN_187502	ILMN_249540	2500003M10RIK	NM_023215.5	NM_023215.5		66511	146149264	NM_023215.5	2500003M10Rik	NP_075704.2	ILMN_2676716	001780730	S	2008	TAAGAAGAGGTGGTGTTCGAGGTCGTGGAGGTCCTGGGAGAGGGGGCCTA				3qF1	Mus musculus RIKEN cDNA 2500003M10 gene (2500003M10Rik), mRNA.				C81330	C81330
Mus musculus	RefSeq	ILMN_222983	ILMN_222983	5330439B14RIK	NM_177314.3	NM_177314.3		321015	142351790	NM_177314.3	5330439B14Rik	NP_796288.1	ILMN_2757661	000830082	S	1210	GTGTCCACCTGCTTGTCTCGGATACTATAGATAAATGCTTATACCAGAAG	6	+	142574800-142574849	6qG2	Mus musculus RIKEN cDNA 5330439B14 gene (5330439B14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_205417	ILMN_319899	LOC100043518	XM_001480841.1	XM_001480841.1		100043518	149261997	XM_001480841.1	LOC100043518	XP_001480891.1	ILMN_1216332	001450088	S	794	TTCCCGGCCGGACCAGCGGTCGCCAGCGCCAGCTTTAGCCTGTGGGCCTA	11	+	77796482-77796519:77796520-77796531	11qB5	PREDICTED: Mus musculus hypothetical protein LOC100043518 (LOC100043518), mRNA.					
Mus musculus	RefSeq	ILMN_222004	ILMN_222004	GNB5	NM_138719.3	NM_138719.3		14697	146149134	NM_138719.3	Gnb5	NP_619733.1	ILMN_1237961	000830427	S	1747	AGGCTGAGCATCCCCGACACTTGAGGGCAAAACAGGTTGCCATTCCTAGC				9qD	Mus musculus guanine nucleotide binding protein, beta 5 (Gnb5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gbeta5; GBS; flr	Gbeta5; GBS; flr
Mus musculus	RefSeq	ILMN_214806	ILMN_214806	LY75	NM_013825.1	NM_013825.1		17076	7305244	NM_013825.1	Ly75	NP_038853.1	ILMN_1237096	006650176	S	6774	TTGTGATCCCATGTAGTCAGTATGAAGAGAAGGAGTCCAGCTATTGCGAG	2	-	60092980-60093029	2qC1.1	Mus musculus lymphocyte antigen 75 (Ly75), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DEC205; CD205; DEC-205	DEC205; CD205; DEC-205
Mus musculus	RefSeq	ILMN_253550	ILMN_253550	GM347	NM_001005420.1	NM_001005420.1		241289	53749209	NM_001005420.1	Gm347	NP_001005420.1	ILMN_2911307	004040170	S	5224	GTGGTGGCAGGCTCTGTGGTCCCGTTGTGGTCCTAAATGATCTGGTTCTA	2	+	28310786-28310835	2qA3	Mus musculus gene model 347, (NCBI) (Gm347), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC99945; mKIAA0649	MGC99945; mKIAA0649
Mus musculus	RefSeq	ILMN_238981	ILMN_238981	OLFR1303	NM_146402.1	NM_146402.1		258397	33238979	NM_146402.1	Olfr1303	NP_666514.1	ILMN_2935247	002030687	S	499	CCCTTCTGTGGCCCAAATACACTGGACAGCTTTTACTGTGACCTTCCTAA	2	-	111654333-111654382	2qE3	Mus musculus olfactory receptor 1303 (Olfr1303), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR245-7	MOR245-7
Mus musculus	Riken	ILMN_205598	ILMN_205598	A130023A14RIK	ri|A130023A14|PX00122K16|AK037516|3334					AK037516	A130023A14Rik		ILMN_1225202	002940193	S	3110	TGTTGGTGAGTGGGGTAAAGACAAGGCCTAAGAGCAGGGCCAGCCCCAAG										
Mus musculus	RefSeq	ILMN_222440	ILMN_222440	NR5A1	NM_139051.3	NM_139051.3		26423	144922643	NM_139051.3	Nr5a1	NP_620639.1	ILMN_1254140	005720288	S	2294	GTCCTTGGAAAGTGTGTGAGAGAGAAGTGGGCAGGAGACAGACTGGGGAC	2	-	38548783-38548832	2qB	Mus musculus nuclear receptor subfamily 5, group A, member 1 (Nr5a1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IGI]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation [goid 1553] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [evidence IDA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC124277; SF1; Ftz-F1; ELP; SF-1; Ftzf1; Ad4BP; ELP-3; MGC124278	MGC124277; SF1; Ftz-F1; ELP; SF-1; Ftzf1; Ad4BP; ELP-3; MGC124278
Mus musculus	RefSeq	ILMN_232745	ILMN_232745	SUV420H1	NM_144871.2	NM_144871.2		225888	31542283	NM_144871.2	Suv420h1	NP_659120.2	ILMN_2996601	006290242	S	4097	TGTGAACAGCGTGGCGACAGCGAGCAGCGTTTGTCCAATGAACTCCAGCT	19	+	3816338-3816387	19qA	Mus musculus suppressor of variegation 4-20 homolog 1 (Drosophila) (Suv420h1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the addition of a methyl group onto lysine at position 20 of the histone H4 protein [goid 42799] [evidence IDA]	MGC18702; Suv4-20h1; AA117471; C630029K18Rik	MGC18702; Suv4-20h1; AA117471; C630029K18Rik
Mus musculus	MEEBO	ILMN_192606	ILMN_192606	SMARCA3	scl23356.25.1035_6				7106416	NM_009210	Smarca3		ILMN_2742680	002810270	S	2711	CCTTAAAGCAGGTGGAGTTGGCTTGAATCTCTGCGCACGTTCTCGAGTGT										
Mus musculus	RefSeq	ILMN_219022	ILMN_219022	CD19	NM_009844.1	NM_009844.1		12478	6753337	NM_009844.1	Cd19	NP_033974.1	ILMN_2975994	006480746	S	2009	CCGCTACATTCCATGGTGTCCCACAAGGGAGAGACAGTGATGGGACTAGC	7	-	133552305-133552354	7qF3	Mus musculus CD19 antigen (Cd19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]		AW495831	AW495831
Mus musculus	RefSeq	ILMN_256320	ILMN_256320	EG546150	NM_001024729.1	NM_001024729.1		546150	85701559	NM_001024729.1	EG546150	NP_001019900.1	ILMN_2995474	006760300	S	3771	GCGACCTCTGCCTTTGGAGTGCTGGAACTAAAGACATGTACCACCATGCC	9	+	83682702-83682751	9qE2	Mus musculus predicted gene, EG546150 (EG546150), mRNA.					
Mus musculus	RefSeq	ILMN_199943	ILMN_258472	LOC433790	XM_485486.4	XM_485486.4		433790	94372757	XM_485486.4	LOC433790	XP_485486.4	ILMN_1239259	003420768	S	579	TTGGGAAGAAGGTAGAGGTGGCAGTGGAGCAGAAAAATCTCCAGGTCCCT	4	-	145722283-145722332	4qE1	PREDICTED: Mus musculus similar to Cdv3 protein (LOC433790), mRNA.					
Mus musculus	RefSeq	ILMN_221015	ILMN_221015	BC048502	NM_177631.2	NM_177631.2		223927	31341257	NM_177631.2	BC048502	NP_808299.1	ILMN_2960128	003290100	S	396	GCTGGGAGTCAATTTCCTGACCCTGATGTCTGGAACGTGGATCATGCGCA	15	-	103269247-103269257:103272309-103272347	15qF3	Mus musculus cDNA sequence BC048502 (BC048502), mRNA.				MGC58362	MGC58362
Mus musculus	RefSeq	ILMN_214370	ILMN_214370	KLHL26	NM_172052.1	NM_172052.1		234378	25286712	NM_172052.1	Klhl26	NP_742049.1	ILMN_2647313	001780528	S	2818	GTCCCTTGCTGCTCAGAGTCATGGATGTCATCGTTGTACGGCCGCTCAGC	8	-	72974232-72974281	8qB3.3	Mus musculus kelch-like 26 (Drosophila) (Klhl26), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC38024; C630013N10Rik; Klkl26	MGC38024; C630013N10Rik; Klkl26
Mus musculus	Riken	ILMN_203008	ILMN_203008	LAMA4	ri|5930424P08|PX00055P06|AK031189|3165					AK031189	Lama4		ILMN_1252549	006380341	S	3042	GTCATACCACAGGGAGAACGACAGGAGAATTTCAGGCCAGTCAGGCCAGC						A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216731	ILMN_216731	PRKDC	scl019090.11_114	NM_011159.1			23956059	NM_011159.1	Prkdc		ILMN_2743517	005910445	S	11036	CCTGAAAGAGTATTCCCCCTGGATGAGTGAGTTCAAAGCGCAGTTCCTGA						A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which a lymphoid progenitor cell becomes committed to becoming any type of T cell [goid 2360] [evidence IMP]; The process whereby a lymphoid progenitor cell becomes committed to become any type of B cell [goid 2326] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33153] [evidence IMP]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a pro-B cell. Pro-B cells are the earliest stage of the B cell lineage and undergo heavy chain D and J gene rearrangements, although they are not fully committed [goid 2328] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; Any process that decreases the stability of a protein, making it more vulnerable to degradative processes or aggregation [goid 31648] [evidence IDA]; The process whereby a relatively unspecialized precursor cell acquires specialized features of B cells, T cells, or natural killer cells [goid 30098] [evidence IMP]; Programmed cell death of errant germ line cells that are outside the normal migratory path or ectopic to the gonad. This is an important mechanism of regulating germ cell survival within the embryo [goid 35234] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, requiring the presence of DNA [goid 4677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199323	ILMN_199323	LOC235909	XM_142472.3	XM_142472.3			38095392	XM_142472.3	LOC235909		ILMN_1215361	001470274	S	890	CCCTTGACTCATTCTATGGAACCCTTGCTTTTGTCCACAATCATGCAGTG										
Mus musculus	RefSeq	ILMN_214532	ILMN_231835	ARRDC4	NM_001042592.2	NM_001042592.2		66412	112363103	NM_001042592.2	Arrdc4	NP_001036057.1	ILMN_2648967	006060564	S	713	ATGGTTGGCTGTTGGCTTTTCACCTCTGGTCCTGTGTCACTGAGCGTCAA	7	-	75887483-75887532	7qD1	Mus musculus arrestin domain containing 4 (Arrdc4), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AV216361; 2410003C09Rik	AV216361; 2410003C09Rik
Mus musculus	MEEBO	ILMN_189960	ILMN_189960	ENTPD4	scl46138.15_174				18093089	NM_026174	Entpd4		ILMN_1226174	001780064	S	5	CCTCCATAGCACGTAAGTTGAAGTAGTTGGCAGTAGACGGGTATTTGGAG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198017	ILMN_198017	LOC269683	XM_196362.1	XM_196362.1			25049718	XM_196362.1	LOC269683		ILMN_1256324	000730689	S	380	GAGGGCAGTAAATGAGAAGGCACAAGATGCAAGAAGAGAGAGGGGTTTGC										
Mus musculus	RefSeq	ILMN_200330	ILMN_200330	LOC386246	XM_359137.1	XM_359137.1			38081330	XM_359137.1	LOC386246		ILMN_1214026	001440136	S	372	CCTAGGCAAATGGAATGACCTGGAGGGTATCATCCTGAGTGAGGTAACCC										
Mus musculus	RefSeq	ILMN_195738	ILMN_252729	LOC633966	XM_908539.2	XM_908539.2		633966	94372367	XM_908539.2	LOC633966	XP_913632.1	ILMN_2609533	002710333	S	1180	AAAAAACTCTGGGGCTGGGGACTTCCTGTTGCCACAGAACTGGGGTGCGC					PREDICTED: Mus musculus similar to guanine nucleotide binding protein-like 2 (nucleolar) (LOC633966), mRNA.					
Mus musculus	RefSeq	ILMN_218324	ILMN_218324	NECAB2	NM_054095.2	NM_054095.2		117148	118131117	NM_054095.2	Necab2	NP_473436.1	ILMN_2694360	003520048	S	1600	TTCAATATACTAATCAAAGGACTGGTAACTTCCCCCTGCTGTGTGGCACA	8	+	121996164-121996213	8qE1	Mus musculus N-terminal EF-hand calcium binding protein 2 (Necab2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms [goid 17000] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Necab2; MGC141288; MGC141287	Necab2; MGC141288; MGC141287
Mus musculus	RefSeq	ILMN_208650	ILMN_208650	MRPS27	NM_173757.3	NM_173757.3		218506	50980302	NM_173757.3	Mrps27	NP_776118.2	ILMN_2588199	003800008	S	1481	AATATCGGGTGAGCGTGACGGGAAGCTATAGCTGAAGGGTCGGCTCTGCA	13	+	100185149-100185198	13qD1	Mus musculus mitochondrial ribosomal protein S27 (Mrps27), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]			2610028H14Rik	2610028H14Rik
Mus musculus	MEEBO	ILMN_208925	ILMN_208925	RPO2TC1	scl47386.5_134	NM_011294.2			31560554	NM_011294.2	Rpo2tc1		ILMN_2590860	000610278	S	3005	GAACGCTAGCACAGAGCTTGCCATAGAGCCTGTGAACGTCTTCAGAACCG										
Mus musculus	RefSeq	ILMN_223800	ILMN_233027	MKNK1	NM_021461.4	NM_021461.4		17346	146149340	NM_021461.4	Mknk1	NP_067436.1	ILMN_1254855	002140358	S	2142	CCCCACGCGGATATCCACGCACTTAGTTTTTAATCCTCTCCCCGACAGTC				4qD1	Mus musculus MAP kinase-interacting serine/threonine kinase 1 (Mknk1), mRNA.		A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2410048M24Rik; Mnk1	2410048M24Rik; Mnk1
Mus musculus	MEEBO	ILMN_221511	ILMN_221511	4930555F03RIK	scl075359.4_11	XM_134133.2			28484278	XM_134133.2	4930555F03Rik		ILMN_2736559	005700050	S	281	ACAAGACCAGATGCTGCAGGAGTGGGAATGGATAGTCAAACATATCCGGG										
Mus musculus	RefSeq	ILMN_222416	ILMN_222416	ICA1L	NM_027407.2	NM_027407.2		70375	51036621	NM_027407.2	Ica1l	NP_081683.2	ILMN_1224186	004850224	S	3573	GCATTAAGATGGTAACTTAAGTGTGCTCTTGCTCTCTCTTGAGCATCTAT	1	-	60045939-60045988	1qC2	Mus musculus islet cell autoantigen 1-like (Ica1l), mRNA.				1700030B17Rik; Als2cr15	1700030B17Rik; Als2cr15
Mus musculus	Riken	ILMN_203572	ILMN_203572	A230065C20RIK	ri|A230065C20|PX00129B15|AK038810|1987					AK038810	A230065C20Rik		ILMN_1246491	006290541	S	1619	GCCTGCTCTCCAGGTTTCAGCTCTTCTGTTGGAAGAAGTGGGTAGCACAC										
Mus musculus	RefSeq	ILMN_199897	ILMN_199897	LOC381557	XM_355523.1	XM_355523.1			38078817	XM_355523.1	LOC381557		ILMN_1215501	003990470	S	5446	GCGGGCCACATTTGAGAACCCCATGTATGACCGCAACATCCAGCCCACAG										
Mus musculus	RefSeq	ILMN_188378	ILMN_237380	KLHL15	NM_001039059.1	NM_001039059.1		236904	84794642	NM_001039059.1	Klhl15	NP_001034148.1	ILMN_1230244	003460411	S	1006	GCAGTCTTGGCTGCGACATGATAGACGACGGTGGAGACACACAGATACCA	X	+	91498363-91498412	XqC3	Mus musculus kelch-like 15 (Drosophila) (Klhl15), transcript variant 3, mRNA.				6330500C13Rik; MGC47138	6330500C13Rik; MGC47138
Mus musculus	RefSeq	ILMN_209224	ILMN_209224	1190002H23RIK	NM_025427.2	NM_025427.2		66214	127138619	NM_025427.2	1190002H23Rik	NP_079703.2	ILMN_2593774	002900373	S	675	AGCCATTGGGCCCATCTCTGGGCAGTTCGGAGAGTGAAGCTCACTTTGTT	14	-	79688746-79688795	14qD3	Mus musculus RIKEN cDNA 1190002H23 gene (1190002H23Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [evidence ISO]	Rgc-32; Rgc32	Rgc-32; Rgc32
Mus musculus	MEEBO	ILMN_188804	ILMN_188804	FNDC3	scl45332.1.1_220				46519046	NM_207636	Fndc3		ILMN_1227054	004250739	S	2	AAGGCAGAACGCGTTGCAGTCAGGAAAGCAGCTGAAGAAGCCTTTAAGTG										
Mus musculus	MEEBO	ILMN_188804	ILMN_188804	FNDC3	scl45332.1.1_220				46519046	NM_207636	Fndc3		ILMN_2482055	006200278	S	14	GCGATGGAAAACCATCCTCTTTGTGTTCGCGGTTTGACTAACGCAGCCTG										
Mus musculus	RefSeq	ILMN_200902	ILMN_200902	LOC381897	XM_355914.1	XM_355914.1			38086924	XM_355914.1	LOC381897		ILMN_2540403	000380221	S	1724	GGTAGGCGTGATTCCTCTGTCATTCTGTGATGTGTCATGTGAGAGCCTCC										
Mus musculus	RefSeq	ILMN_259728	ILMN_259728	PDDC1	NM_172116.2	NM_172116.2		213350	31981985	NM_172116.2	Pddc1	NP_742114.2	ILMN_2857326	000450278	S	742	TCATGGTCTCCTGTACTGACACTCGATGGGACACTCAAGCCTCCATCAGG	7	-	141260181-141260230	7qF5	Mus musculus Parkinson disease 7 domain containing 1 (Pddc1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC38368; BC023835; D230016J19Rik	MGC38368; BC023835; D230016J19Rik
Mus musculus	RefSeq	ILMN_184848	ILMN_241754	PDGFC	NM_019971.2	NM_019971.2		54635	31560372	NM_019971.2	Pdgfc	NP_064355.1	ILMN_2753912	004010056	S	3166	GGGAAATAGGAGTATAGCTCAGAGAAGCACGTCCCCAGAAACCTCGACCA	3	+	81017607-81017656	3qE3	Mus musculus platelet-derived growth factor, C polypeptide (Pdgfc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity [goid 7171] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]	Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	PDGF-C; AI647969; 1110064L01Rik	PDGF-C; AI647969; 1110064L01Rik
Mus musculus	RefSeq	ILMN_219796	ILMN_219796	CMBL	NM_181588.3	NM_181588.3		69574	141803198	NM_181588.3	Cmbl	NP_853619.1	ILMN_2713673	005910072	S	802	GGCAGCTGTTGCCCAAATTTGCCTGAATAATTAACCATCTCTTACTATCC	15	+	31519635-31519684	15qB2	Mus musculus carboxymethylenebutenolidase-like (Pseudomonas) (Cmbl), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	2310016A09Rik	2310016A09Rik
Mus musculus	Riken	ILMN_202626	ILMN_202626	4931415C17RIK	ri|E430007M06|PX00097E02|AK088235|1313					AK088235	4931415C17Rik		ILMN_1256007	000770437	S	1184	CGAGTTCCCCAGAACCCACAGAGCAGGAGAAAAGCAACTACCTCAGTTGG										
Mus musculus	RefSeq	ILMN_218257	ILMN_218257	ELMO3	NM_172760.2	NM_172760.2		234683	144922683	NM_172760.2	Elmo3	NP_766348.2	ILMN_1219244	003310674	S	2332	GCTATAGCAGCCACGAAATCACAGACAACCTGACTAGGAGAGCCTCTAAC	8	+	107833803-107833852	8qD3	Mus musculus engulfment and cell motility 3, ced-12 homolog (C. elegans) (Elmo3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	9930107J06; CED12; KIAA0267; MGC67684; BC058752	9930107J06; CED12; KIAA0267; MGC67684; BC058752
Mus musculus	RefSeq	ILMN_218257	ILMN_218257	ELMO3	NM_172760.2	NM_172760.2		234683	144922683	NM_172760.2	Elmo3	NP_766348.2	ILMN_2693636	001340372	S	1614	ACCAAAGTGAATGCCCTCACCTATGGGGAAGTGTTGAGGCTGCGGCAGAC	8	+	107832644-107832693	8qD3	Mus musculus engulfment and cell motility 3, ced-12 homolog (C. elegans) (Elmo3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	9930107J06; CED12; KIAA0267; MGC67684; BC058752	9930107J06; CED12; KIAA0267; MGC67684; BC058752
Mus musculus	RefSeq	ILMN_222280	ILMN_222280	OLFR46	NM_146934.1	NM_146934.1		18345	22203806	NM_146934.1	Olfr46	NP_667145.1	ILMN_3160379	000780008	S	836	GCAAATTTACCTCGGTTTTGTACTCAGTCCTCAGCCCAACCCTCAACCCC	7	+	147796902-147796951	7qF5	Mus musculus olfactory receptor 46 (Olfr46), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	ID12; MOR253-8; IB7; MGC123815; IF5	ID12; MOR253-8; IB7; MGC123815; IF5
Mus musculus	RefSeq	ILMN_199974	ILMN_199974	LOC384132	XM_357444.1	XM_357444.1			38079396	XM_357444.1	LOC384132		ILMN_1249267	002710239	S	1173	AGAGCAGATCCAGGAGGTGTTGGTGCTGAGCGAGTATGGCAGGTGTCAGC										
Mus musculus	RefSeq	ILMN_221413	ILMN_221413	CCDC87	NM_207268.3	NM_207268.3		399599	148536850	NM_207268.3	Ccdc87	NP_997151.2	ILMN_2735241	002900551	S	2607	TTCCGCCAATCATGCACTTTCACAGGGAGCAGCAGCCAGGCGTTAGTGGC				19qA	Mus musculus coiled-coil domain containing 87 (Ccdc87), mRNA.				4931419P11Rik	4931419P11Rik
Mus musculus	MEEBO	ILMN_192441	ILMN_192441	2610040L17RIK	scl0072464.1_181						2610040L17Rik		ILMN_2488092	004290246	S	15	GTGGCATTTCTCCTTTGACAAGCTCGGGGATGACGCTTTAAGGGGCTCGT										
Mus musculus	RefSeq	ILMN_196597	ILMN_253938	D230007K08RIK	XM_980391.1	XM_980391.1		268857	94400935	XM_980391.1	D230007K08Rik	XP_985485.1	ILMN_1217913	002940441	S	3726	CCCAAGCCTAACTGTAGCGGTATGGCCACACAAGACCCAAACAGGAACTG				16qA1	PREDICTED: Mus musculus RIKEN cDNA D230007K08 gene, transcript variant 5 (D230007K08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210848	ILMN_210848	SYT16	NM_172804.2	NM_172804.2		238266	121674808	NM_172804.2	Syt16	NP_766392.2	ILMN_1246983	001510097	S	2598	CTGCATGCCAACCACATTCATCTTTATGCTATGTACCTTGCCAGTAGAAC	12	+	75368796-75368845	12qC3	Mus musculus synaptotagmin XVI (Syt16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	Strep14; syt14r; Syt14l; 6430703N11	Strep14; syt14r; Syt14l; 6430703N11
Mus musculus	RefSeq	ILMN_196631	ILMN_260134	D730039F16RIK	NM_030021.2	NM_030021.2		77996	142380367	NM_030021.2	D730039F16Rik	NP_084297.1	ILMN_1231293	002710564	S	417	GACAAAGACTTCCAAGGTCTCCCGGCTGTTTGCCTATATGAGGTTGGCGC	2	+	34743650-34743691:34745800-34745807	2qB	Mus musculus RIKEN cDNA D730039F16 gene (D730039F16Rik), mRNA.				RP23-9N11.2	RP23-9N11.2
Mus musculus	RefSeq	ILMN_220594	ILMN_228537	PDE4DIP	NM_001039376.1	NM_001039376.1		83679	86476087	NM_001039376.1	Pde4dip	NP_001034465.1	ILMN_1215884	000510546	S	2450	GGGGGGAAGGAACTAATGACATCGTCTCAGACGTTCATCTCTAACCAGCC	3	-	97551736-97551785	3qF2.2	Mus musculus phosphodiesterase 4D interacting protein (myomegalin) (Pde4dip), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C87016; D130016K21Rik; 4732458A06Rik; KIAA0477; 9430063L05Rik; Usmg4; D3Bwg1078e; mKIAA0454	C87016; D130016K21Rik; 4732458A06Rik; KIAA0477; 9430063L05Rik; Usmg4; D3Bwg1078e; mKIAA0454
Mus musculus	RefSeq	ILMN_228537	ILMN_228537	PDE4DIP	NM_001039376.1	NM_001039376.1		83679	86476087	NM_001039376.1	Pde4dip	NP_001034465.1	ILMN_3064283	006100612	I	7876	TCTGTACTGAAGACTCTGTCTCCACAGTGCTCATCGGATGTGGGTGTGTG	3	-	97493882-97493931	3qF2.2	Mus musculus phosphodiesterase 4D interacting protein (myomegalin) (Pde4dip), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C87016; D130016K21Rik; 4732458A06Rik; KIAA0477; 9430063L05Rik; Usmg4; D3Bwg1078e; mKIAA0454	C87016; D130016K21Rik; 4732458A06Rik; KIAA0477; 9430063L05Rik; Usmg4; D3Bwg1078e; mKIAA0454
Mus musculus	RefSeq	ILMN_188430	ILMN_188430	ZFP36	NM_011756.4	NM_011756.4		22695	118130057	NM_011756.4	Zfp36	NP_035886.1	ILMN_3162407	006220026	S	1513	GCAAATAGCCAAAGCCATTGCCAAATCCCTTCTCCCCCAACCAGTGGGCC	7	-	29162005-29162054	7qA3	Mus musculus zinc finger protein 36 (Zfp36), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; Any process that decreases the stability of an RNA molecule, making it more vulnerable to degradative processes [goid 50779] [evidence IMP]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [evidence IMP]; A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps: poly(A) tail shortening, deadenylylation-dependent decapping, and decay of the transcript body, and that can regulate mRNA stability [goid 288] [evidence IDA]; Shortening of the poly(A) tail of a nuclear-transcribed mRNA from full length to an oligo(A) length [goid 289] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence ISO]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IDA]	Gos24; Tis11; Ttp; Nup475; TISII; TIS11D; Zfp-36	Gos24; Tis11; Ttp; Nup475; TISII; TIS11D; Zfp-36
Mus musculus	MEEBO	ILMN_218398	ILMN_218398	9130416B15	scl24993.3_35	NM_183163.1			34147194	NM_183163.1	9130416B15		ILMN_1246351	005670736	S	1186	CAAGCCTCTTAATTCTCTCTAATGCCTGGCTTTGGTGTCAGGGACTGCAG										
Mus musculus	MEEBO	ILMN_192963	ILMN_192963	SCL0001233.1_26	scl0001233.1_26	XM_132960.4			38085469	XM_132960.4	scl0001233.1_26		ILMN_1238324	003170092	S	19	GAAACATGAAGATGGAGAGGAATATGTTTGTCCGATGGAGCTAGGCCAGG										
Mus musculus	RefSeq	ILMN_196774	ILMN_196774	KLK1B27	NM_020268.1	NM_020268.1		16619	12313876	NM_020268.1	Klk1b27	NP_064664.1	ILMN_3009447	001820731	S	744	TGGGGCTCTATCCCATGCGCTAAACCCAATGCGCCAGGCGTCTTCACAAA	7	+	43924609-43924658	7qB4	Mus musculus kallikrein 1-related peptidase b27 (Klk1b27), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	Gk27; Klk27; mGK-27	Gk27; Klk27; mGK-27
Mus musculus	Riken	ILMN_204693	ILMN_204693	C030038O19RIK	ri|A330053D11|PX00131K06|AK039513|2362					AK039513	C030038O19Rik		ILMN_1214006	006960136	S	2020	GACTCTATGTAGGAGACTTGTGCTTCTGAGTGGAGACCTGGGCCACCTCC										
Mus musculus	RefSeq	ILMN_198447	ILMN_324578	SEC31B	NM_001033343.1	NM_001033343.1		240667	133504850	NM_001033343.1	Sec31b	NP_001028515.1	ILMN_2531717	001170286	S	3304	GACCGCCACTGACCTTAAAACAAAAAGGAAGCTGGAGGAGGCAGCCCGCC	19	-	44592167-44592201:44592634-44592648	19qC3	Mus musculus Sec31 homolog B (S. cerevisiae) (Sec31b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		Sec31l2; Gm341	Sec31l2; Gm341
Mus musculus	MEEBO	ILMN_196087	ILMN_196087	SCL0002357.1_64	scl0002357.1_64	AK090334.1			26105884	AK090334.1	scl0002357.1_64		ILMN_1225576	006760743	S	10	GTCCCCTGGTTACTCCCTTGCCTTGTTTATCTGAAGATCAGATGGATAGA										
Mus musculus	MEEBO	ILMN_224026	ILMN_224026	COMP	scl33728.21.1_0				7710009	NM_016685	Comp		ILMN_2773395	003440538	S	2241	ATCCCTGAGGACTACGAGAGTCACCGGCTGCAGAGAGTCTAGGGACCAGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188790	ILMN_188790	4930455G09RIK	scl078917.2_95						4930455G09Rik		ILMN_1215010	005050088	S	1	AAGCTGCACACCGTTTCTGAATTCTCCGCAGCGCTGAGGCTTATCTCCGG										
Mus musculus	RefSeq	ILMN_211881	ILMN_211881	P2RX7	NM_011027.2	NM_011027.2		18439	84781765	NM_011027.2	P2rx7	NP_035157.2	ILMN_1216885	002370280	S	1820	TATGCCACCTGGCGCTTCGGCTCCCAGGACATGGCCGACTTTGCCATTCT	5	+	123131182-123131231	5qF	Mus musculus purinergic receptor P2X, ligand-gated ion channel, 7 (P2rx7), transcript variant 1, mRNA.	The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IMP]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The formation of a pore complex, a small opening in a membrane that allows the passage of liquids and/or gases [goid 46931] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; The process by which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome [goid 1845] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus [goid 51602] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 alpha from a cell or group of cells [goid 50717] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein in a multicellular organism, occurring at the tissue, organ, or organismal level [goid 44254] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence IMP]; The directed movement of nicotinamide adenine dinucleotide into, out of, within or between cells; transport may be of either the oxidized form, NAD, or the reduced form, NADH [goid 43132] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [evidence IMP]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51901] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid [goid 14054] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of glutamate [goid 14049] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a prostaglandin from a cell or group of cells [goid 32308] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluid shear stress stimulus. Fluid shear stress is the force acting on an object in a system where the fluid is moving across a solid surface [goid 34405] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production [goid 32731] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic substance stimulus [goid 14070] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; The assembly of a bleb, a cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32060] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]; The evagination of a membrane, resulting in formation of a vesicle [goid 6900] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IDA]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the plasma membrane [goid 7009] [evidence IDA]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IDA]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The transfer of a phospholipid from its site of synthesis to the plasma membrane [goid 6649] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IMP]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IMP]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IMP]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence ISO]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [evidence IMP]; Interacting selectively with lipopolysaccharide [goid 1530] [evidence IDA]	AI467586	AI467586
Mus musculus	RefSeq	ILMN_219348	ILMN_243040	OLFR112	NM_001013575.3	NM_001013575.3		258096	110665723	NM_001013575.3	Olfr112	NP_001013593.2	ILMN_2707556	004210400	S	3060	TTTCTGACTTTTCAATTATACACAAGAATGTTTATAGTCATTGGGATTCC	17	-	37703582-37703631	17qB1	Mus musculus olfactory receptor 112 (Olfr112), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	4930580F03Rik; MOR218-4	4930580F03Rik; MOR218-4
Mus musculus	RefSeq	ILMN_211490	ILMN_211490	SGTA	NM_024499.1	NM_024499.1		52551	21313587	NM_024499.1	Sgta	NP_078775.1	ILMN_1242694	006200019	S	1375	TGGGCACCAGCGTCCCACACCCTCGCCTGGTTGCAGGTCCCAGCAGGTGC	10	-	80507340-80507389	10qC1	Mus musculus small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha (Sgta), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	AI194281; Stg; Sgt; D10Ertd190e; MGC6336; 5330427H01Rik	AI194281; Stg; Sgt; D10Ertd190e; MGC6336; 5330427H01Rik
Mus musculus	RefSeq	ILMN_215361	ILMN_260983	LOC545339	XM_901143.2	XM_901143.2		545339	94386061	XM_901143.2	LOC545339	XP_906236.1	ILMN_2658563	003940010	S	194	TTTTGAAATGCCTAAAAGACTTTTATTGCTCTAATTATCCAGATGCACCT	9	+	42772118-42772167	9qA5.1	PREDICTED: Mus musculus similar to SP140 nuclear body protein family member, transcript variant 4 (LOC545339), mRNA.					
Mus musculus	RefSeq	ILMN_185620	ILMN_242771	ZFP455	NM_001048204.1	NM_001048204.1		218311	114842384	NM_001048204.1	Zfp455	NP_001041669.1	ILMN_2428584	007150019	S	2550	GAGAAATATTGTACTGGAGCTAAAGTTGTGTATATTGTAGATTTAGACTT	13	+	67310072-67310121	13qB3	Mus musculus zinc finger protein 455 (Zfp455), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rslcan-10; 3732412P20Rik	Rslcan-10; 3732412P20Rik
Mus musculus	RefSeq	ILMN_209417	ILMN_209417	FXYD3	NM_008557.1	NM_008557.1		17178	6678813	NM_008557.1	Fxyd3	NP_032583.1	ILMN_2595593	002470408	S	205	GGCGGGCTCATTTGTGCAGGGATTCTCTGTGCCCTGGGCATTATAGTCCT	7	-	31856201-31856217:31856311-31856343	7qB1	Mus musculus FXYD domain-containing ion transport regulator 3 (Fxyd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]	Mat8	Mat8
Mus musculus	MEEBO	ILMN_224047	ILMN_224047	FCGRT	scl31392.8.1_11				6753835	NM_010189	Fcgrt		ILMN_1221819	006590167	S	1219	CCCATGGATCCCTGCTTTTGTGGCCTGCTTCAGTTTCCCTTCTTAATGTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214680	ILMN_214680	PHYHIPL	NM_178621.3	NM_178621.3		70911	141803106	NM_178621.3	Phyhipl	NP_848736.1	ILMN_2654366	003800035	S	1668	ACCGCATGAGAGAGAGTAATTGCAGCATGAGTTAAATCCTAAAAGCCTAG	10	-	70021575-70021624	10qB5.3	Mus musculus phytanoyl-CoA hydroxylase interacting protein-like (Phyhipl), mRNA.				AI267048; 4921522K17Rik	AI267048; 4921522K17Rik
Mus musculus	Riken	ILMN_202216	ILMN_202216	2410098H20RIK	ri|2410098H20|ZX00080J05|AK010756|1102					AK010756	2410098H20Rik		ILMN_1214404	005220113	S	863	AGGTGCTCGTGGCAGGCACTCCTTTGAGGGGACAGGACTAGCTTGGAAAG										
Mus musculus	RefSeq	ILMN_187418	ILMN_187418	UMOD	NM_009470.2	NM_009470.2		22242	31981927	NM_009470.2	Umod	NP_033496.1	ILMN_2819295	005720598	S	2061	GGCTCCTGAGCATCTGGCTGCTGTTGTTTCCCTCAGCCACTTTGATCTTC	7	-	126606741-126606790	7qF2	Mus musculus uromodulin (Umod), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	uromucoid; MGC14034	uromucoid; MGC14034
Mus musculus	RefSeq	ILMN_187418	ILMN_187418	UMOD	NM_009470.2	NM_009470.2		22242	31981927	NM_009470.2	Umod	NP_033496.1	ILMN_2819294	000450671	S	2207	GAGGGAGCTCACACTGCCTCCAGCTTGCACGTACTCTTTCTTTAATCCTC	7	-	126606595-126606644	7qF2	Mus musculus uromodulin (Umod), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	uromucoid; MGC14034	uromucoid; MGC14034
Mus musculus	Riken	ILMN_203905	ILMN_203905	RELN	ri|9630010N14|PX00114D09|AK035849|2558					AK035849	Reln		ILMN_1249750	006900458	S	2213	AGGGAACAGGTCCCCAGAACCTCTCTTATGCCACCAGAAAAGATGGAGGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the spinal cord [goid 21511] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration [goid 21800] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of small GTPase mediated signal transduction [goid 51057] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine/tyrosine = ADP + protein serine/threonine/tyrosine phosphate [goid 4712] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184501	ILMN_184501	CHRNG	scl17701.11_652				31982814	NM_009604	Chrng		ILMN_1213304	000110619	S	1	CAGCAGTACGTCCCATTCGTCTAATGTAATACTTCCTCCCACCCCCACTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]	 [goid 4889] [evidence IGI];  [goid 4889] [evidence IGI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_201938	ILMN_201938	9030625A11RIK	ri|9030625A11|PX00025F06|AK018575|782					AK018575	9030625A11Rik		ILMN_2545782	004200678	S	1	GACTCGTGCAGAAGGAAACCCTGCCACCAGCCTCGGGATGGGTAACTGCG										
Mus musculus	RefSeq	ILMN_218687	ILMN_218687	DGUOK	NM_013764.1	NM_013764.1		27369	7304998	NM_013764.1	Dguok	NP_038792.1	ILMN_1252649	001340382	S	545	CGCAAACCGGCTTTTGTTACACGGCTTCATCTATCTCCAGGCTTCACCCC	6	-	83436979-83437028	6qC3	Mus musculus deoxyguanosine kinase (Dguok), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The chemical reactions and pathways involving dGTP, guanosine triphosphate [goid 46070] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + deoxyguanosine = ADP + dGMP [goid 4138] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + deoxyguanosine = ADP + dGMP [goid 4138] [evidence IDA]	dGK	dGK
Mus musculus	RefSeq	ILMN_214237	ILMN_214237	CPXM1	NM_019696.1	NM_019696.1		56264	9789916	NM_019696.1	Cpxm1	NP_062670.1	ILMN_2645816	001470553	S	1941	CTCGGCATTGCGGATGCTGTCATTGCCGTGGAGGGCATTAACCACGATGT	2	-	130216981-130217030	2qF1	Mus musculus carboxypeptidase X 1 (M14 family) (Cpxm1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IDA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	Cpx1; Cpx-1; Cpxm; AA986902	Cpx1; Cpx-1; Cpxm; AA986902
Mus musculus	RefSeq	ILMN_219929	ILMN_219929	DNAHC5	NM_133365.2	NM_133365.2		110082	114155136	NM_133365.2	Dnahc5	NP_579943.2	ILMN_1236101	004860270	S	13854	GAAACTCATTGAATCCAAACCCAAAGTGCTTTTTGAGCTGATGCCTGTCA	15	+	28389032-28389081	15qB1	Mus musculus dynein, axonemal, heavy chain 5 (Dnahc5), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence IMP]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Cell motility due to movement of cilia or flagella [goid 1539] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IMP]	mKIAA1603; Dnah5; Mdnah5; KIAA1603; AU022615	mKIAA1603; Dnah5; Mdnah5; KIAA1603; AU022615
Mus musculus	RefSeq	ILMN_203261	ILMN_219929	DNAHC5	NM_133365.2	NM_133365.2		110082	114155136	NM_133365.2	Dnahc5	NP_579943.2	ILMN_1227601	000990397	S	15360	TGTGTGCAGTAGGTGGAGAGGGTGTTTGTTCTCCACCACATACAGGTCTG	15	+	28401544-28401593	15qB1	Mus musculus dynein, axonemal, heavy chain 5 (Dnahc5), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence IMP]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Cell motility due to movement of cilia or flagella [goid 1539] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IMP]	mKIAA1603; Dnah5; Mdnah5; KIAA1603; AU022615	mKIAA1603; Dnah5; Mdnah5; KIAA1603; AU022615
Mus musculus	RefSeq	ILMN_199812	ILMN_199812	LOC383047	XM_356822.1	XM_356822.1			38077539	XM_356822.1	LOC383047		ILMN_1217846	006400735	S	68	TCCAGTATGGCTCTACCCATGGCAAACTCAATGGCACAGTTAAGGCTGGG										
Mus musculus	RefSeq	ILMN_212021	ILMN_226604	ARPC4	NM_026552.2	NM_026552.2		68089	142365377	NM_026552.2	Arpc4	NP_080828.1	ILMN_1249334	007000064	S	1107	GCTGTCTTACAAGCCTCCTTAGGCCTAGTAGAGAGGCGGTATGGACCCTC	6	+	113339277-113339326	6qE3	Mus musculus actin related protein 2/3 complex, subunit 4 (Arpc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p20-Arc; 20kDa; AI327076; 5330419I20Rik	p20-Arc; 20kDa; AI327076; 5330419I20Rik
Mus musculus	RefSeq	ILMN_201166	ILMN_201166	LOC382050	XM_356123.1	XM_356123.1			38089570	XM_356123.1	LOC382050		ILMN_1259680	002260184	S	204	GGAACATCTTCTGGGTATATGCCTAGGAGAGGTATTGCGGGATCCTCCGA										
Mus musculus	RefSeq	ILMN_250778	ILMN_250778	CD37	NM_007645.2	NM_007645.2		12493	31982470	NM_007645.2	Cd37	NP_031671.1	ILMN_2929526	005050431	S	1101	GGACCCAGCTGTCTGCCCTATTGACAGCCTTCACTTTCCCCACATGGCCA	7	-	45101750-45101799	7qB4	Mus musculus CD37 antigen (Cd37), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the frequency, rate, or extent of immunoglobulin production [goid 2639] [evidence IMP]; Any process that modulates the frequency, rate, or extent of a humoral immune response [goid 2920] [evidence IMP]		Tspan26	Tspan26
Mus musculus	RefSeq	ILMN_219081	ILMN_219081	EG229862	NM_177665.3	NM_177665.3		229862	142366056	NM_177665.3	EG229862	NP_808333.1	ILMN_2704024	003290152	S	676	GGCTACTCTCTATCTTACGATAGAATTACGAATATGCACAGGGGATGAGA	3	-	137213240-137213289	3qG3	Mus musculus predicted gene, EG229862 (EG229862), mRNA.				9230109N16	9230109N16
Mus musculus	RefSeq	ILMN_211966	ILMN_211966	GOLGA4	NM_018748.3	NM_018748.3		54214	118130754	NM_018748.3	Golga4	NP_061218.2	ILMN_2987937	005360487	S	6552	GATCAGCGACTCCAAGCTGAAGGAGCAGGAGTTGAGAGAACAGGTCCATA	9	+	118476325-118476367:118478082-118478088	9qF3	Mus musculus golgi autoantigen, golgin subfamily a, 4 (Golga4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]			AI225887; Olp-1; AU019508	AI225887; Olp-1; AU019508
Mus musculus	RefSeq	ILMN_195059	ILMN_195059	TUBGCP2	NM_133755.1	NM_133755.1		74237	19526967	NM_133755.1	Tubgcp2	NP_598516.1	ILMN_2512216	002490433	S	2725	CTTCTTGATTTGCTGGCCCGACTAAGTGTCTACAGCACCAGTGACTGCGA	7	-	147182695-147182744	7qF4	Mus musculus tubulin, gamma complex associated protein 2 (Tubgcp2), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]		1700022B05Rik	1700022B05Rik
Mus musculus	RefSeq	ILMN_195977	ILMN_245559	LOXL1	NM_010729.2	NM_010729.2		16949	45598389	NM_010729.2	Loxl1	NP_034859.2	ILMN_1255871	001740112	S	2303	CTGGATGCCAGACCCTGTCTTGTACCTACTTCTCCTCTACAACACCATGG	9	-	58136488-58136537	9qB	Mus musculus lysyl oxidase-like 1 (Loxl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence ISO]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + H2O2 [goid 4720] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces an oxygen molecule [goid 16641] [evidence IDA]	Loxl; MGC106801	Loxl; MGC106801
Mus musculus	Riken	ILMN_206113	ILMN_206113	B430202L17RIK	ri|B430202L17|PX00071I21|AK080899|3551					AK080899	B430202L17Rik		ILMN_1213036	005130397	S	2940	GGTTGGCCTGTAACTTGTAGTCATGCTCCTGCGACTGCCTCCTGATGTTG										
Mus musculus	RefSeq	ILMN_194079	ILMN_259332	PPL	NM_008909.2	NM_008909.2		19041	112421038	NM_008909.2	Ppl	NP_032935.2	ILMN_2503188	001510491	S	5907	TTCTGAAAAGATCTTAGTAATGGATGGTGTGCTAGCCTTACTTTCAGTGC	16	-	5086704-5086753	16qA1	Mus musculus periplakin (Ppl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AW553870	AW553870
Mus musculus	RefSeq	ILMN_259332	ILMN_259332	PPL	NM_008909.2	NM_008909.2		19041	112421038	NM_008909.2	Ppl	NP_032935.2	ILMN_3155363	003800634	A	5763	CAGTGCCTGCTCAGTAGTGACTTTTCTCATTGAACAGGGCTCTACACTAG	16	-	5086848-5086897	16qA1	Mus musculus periplakin (Ppl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AW553870	AW553870
Mus musculus	RefSeq	ILMN_259332	ILMN_259332	PPL	NM_008909.2	NM_008909.2		19041	112421038	NM_008909.2	Ppl	NP_032935.2	ILMN_3076424	005220397	I	3625	AATGCTAAGGTGGTGGTACAGGAGAAGGTCCGAGAGATCGTGCGGCCAGA	16	-	5088986-5089035	16qA1	Mus musculus periplakin (Ppl), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AW553870	AW553870
Mus musculus	RefSeq	ILMN_218712	ILMN_218712	OLFR1325	NM_146398.1	NM_146398.1		258393	33239363	NM_146398.1	Olfr1325	NP_666510.1	ILMN_1238053	005860037	S	576	GCTCTGTTCTAATACCATTTCTTTACAGATTATGATGATAGCTTGTGCTG	X	+	71840242-71840291	XqA7.3	Mus musculus olfactory receptor 1325 (Olfr1325), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR102-1	MOR102-1
Mus musculus	RefSeq	ILMN_218278	ILMN_218278	RAD52	NM_011236.1	NM_011236.1		19365	6755279	NM_011236.1	Rad52	NP_035366.1	ILMN_2693850	006620209	S	1442	GGTCACAAAATTGTTCCACCTTGGCTCATGCTGAACTCTTTAGAGGACTA	6	+	119872604-119872653	6qF1	Mus musculus RAD52 homolog (S. cerevisiae) (Rad52), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	Rad52yh	Rad52yh
Mus musculus	RefSeq	ILMN_213910	ILMN_213910	SIT1	NM_019436.1	NM_019436.1		54390	9507100	NM_019436.1	Sit1	NP_062309.1	ILMN_2890954	002650022	S	810	CGGAAGCCTCCTGGTTTCCTGAGGAAGGAGTTGCAAAGAGAGATCTCCAC	4	-	43503500-43503549	4qB1	Mus musculus suppression inducing transmembrane adaptor 1 (Sit1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		Sit	Sit
Mus musculus	RefSeq	ILMN_222501	ILMN_222501	C130032J12RIK	NM_178684.3	NM_178684.3		218975	83627700	NM_178684.3	C130032J12Rik	NP_848799.1	ILMN_3151503	001580209	A	899	GGCTGGTTTCGCTGTTGGTTGAGGGCATTTGTGAAAGAACTTTGCACCTC	14	+	46241374-46241423	14qC1	Mus musculus RIKEN cDNA C130032J12 gene (C130032J12Rik), mRNA.				9130202B12	9130202B12
Mus musculus	RefSeq	ILMN_200606	ILMN_200606	LOC384384	XM_357614.1	XM_357614.1			38084255	XM_357614.1	LOC384384		ILMN_2539352	004230519	S	349	GGATCCCTGGCTGCCTGCTTGCTCCAGGATTCTGTACACAGTAAGGATGC										
Mus musculus	MEEBO	ILMN_192874	ILMN_192874	JARID1C	scl54543.24_283				24475590	NM_013668	Jarid1c		ILMN_2666640	003290754	S	572	TCCAGGGCTCATCCTTAAAGATTCCCAATGTAGAACGGCGGATCTTGGAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_256358	ILMN_256358	NHEJ1	NM_029342.3	NM_029342.3		75570	124244080	NM_029342.3	Nhej1	NP_083618.2	ILMN_2991107	007550136	S	1000	GCATAGAGCTCGGCTGGTGAAGTCCAAGAGGAAGAAGCCCAGGGGACTCT				1qC3	Mus musculus nonhomologous end-joining factor 1 (Nhej1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence ISS]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence ISS]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1700029B21Rik; XLF; MGC130191; cernunnos; MGC130192	1700029B21Rik; XLF; MGC130191; cernunnos; MGC130192
Mus musculus	RefSeq	ILMN_217933	ILMN_217933	4833405L16RIK	NM_177197.2	NM_177197.2		320581	31343040	NM_177197.2	4833405L16Rik	NP_796171.1	ILMN_2894900	000460064	S	1889	CCTCACAGGCATAACCCACATAGGTGCCACCTCCTTAGAGGCCAATTAAC	13	+	8959827-8959876	13qA1	Mus musculus RIKEN cDNA 4833405L16 gene (4833405L16Rik), mRNA.				IPPI2; Idi2	IPPI2; Idi2
Mus musculus	RefSeq	ILMN_190936	ILMN_238248	CKS2	NM_025415.2	NM_025415.2		66197	142375774	NM_025415.2	Cks2	NP_079691.1	ILMN_2768325	006220309	S	524	AGTTTTTTCTTAATATAAATGCCTGTTTTATTTTACCTGTTTTGTTAAAT	13	+	51745954-51746003	13qA5	Mus musculus CDC28 protein kinase regulatory subunit 2 (Cks2), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells [goid 7127] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]	CKSHS2; 1110038L14Rik	CKSHS2; 1110038L14Rik
Mus musculus	RefSeq	ILMN_196315	ILMN_261149	IGFBP3	NM_008343.2	NM_008343.2		16009	111378399	NM_008343.2	Igfbp3	NP_032369.2	ILMN_2727503	004920288	S	823	GCTGAGTCCCAGAGGCGTCCACATCCCAAACTGTGACAAGAAGGGGTTCT	11	-	7109475-7109524	11qA1	Mus musculus insulin-like growth factor binding protein 3 (Igfbp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence ISO]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	AI649005; IGgfbp3; IGFBP-3	AI649005; IGgfbp3; IGFBP-3
Mus musculus	RefSeq	ILMN_196315	ILMN_261149	IGFBP3	NM_008343.2	NM_008343.2		16009	111378399	NM_008343.2	Igfbp3	NP_032369.2	ILMN_1219335	001820601	S	2129	GAGATGTTAGGTGATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTG	11	-	7106357-7106406	11qA1	Mus musculus insulin-like growth factor binding protein 3 (Igfbp3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence ISO]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	AI649005; IGgfbp3; IGFBP-3	AI649005; IGgfbp3; IGFBP-3
Mus musculus	RefSeq	ILMN_218731	ILMN_252606	DCHS1	XM_982545.1	XM_982545.1		233651	94381169	XM_982545.1	Dchs1	XP_987639.1	ILMN_2699513	003460047	S	3393	TGGACGTCTGACCTACAGCCTTCAACAGCTTTCAGAAGACAGCAAGGCCT				7qE3	PREDICTED: Mus musculus dachsous 1 (Drosophila) (Dchs1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_196520	ILMN_252606	DCHS1	XM_982545.1	XM_982545.1		233651	94381169	XM_982545.1	Dchs1	XP_987639.1	ILMN_1218091	003850689	S	9602	TGGCACACCCAGGAGCCAAGTCTGTTCCCCCAAAGCCTGCAAGCACAGCT				7qE3	PREDICTED: Mus musculus dachsous 1 (Drosophila) (Dchs1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_196520	ILMN_252606	DCHS1	XM_982545.1	XM_982545.1		233651	94381169	XM_982545.1	Dchs1	XP_987639.1	ILMN_1216341	001820753	S	10024	GCTGGGACAGGTCCCACATTTCTCTGCAGTTCCTTCAGCACTAGGACCAC				7qE3	PREDICTED: Mus musculus dachsous 1 (Drosophila) (Dchs1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_196430	ILMN_262019	SPEF1	NM_027641.2	NM_027641.2		70997	114687765	NM_027641.2	Spef1	NP_081917.1	ILMN_1225629	003170369	S	538	GTGGCTACATGGATATGGGTTTGCCCCAGAAGGTTCGAGGAGAGGGTGCC	2	-	130997962-130997994:130998106-130998122	2qF1	Mus musculus sperm flagellar 1 (Spef1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			4931426K16Rik; Clamp	4931426K16Rik; Clamp
Mus musculus	RefSeq	ILMN_262019	ILMN_262019	SPEF1	NM_027641.2	NM_027641.2		70997	114687765	NM_027641.2	Spef1	NP_081917.1	ILMN_2951596	001850300	S	2083	GGGTCTCCAACACCCTCCTCTACCTCCATAAACTCCAGGACTGCATGTGG	2	-	130996128-130996177	2qF1	Mus musculus sperm flagellar 1 (Spef1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			4931426K16Rik; Clamp	4931426K16Rik; Clamp
Mus musculus	MEEBO	ILMN_223848	ILMN_223848	KCNJ11	scl31354.3_174				34328178	NM_010602	Kcnj11		ILMN_2770367	001400121	S	2849	GACTCTGCTGGAAGGGTGAGGTAGCCATGGGGAGGGAAGAGAGACGTTGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions into a cell or organelle [goid 10107] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 15272] [evidence IEA];  [goid 5242] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215271	ILMN_215271	DNAJC12	NM_013888.2	NM_013888.2		30045	142363832	NM_013888.2	Dnajc12	NP_038916.1	ILMN_2713332	006900356	S	1015	TATTTCTAAGAGTATACTTAGATACTAGTTCCTATTATATGTTTTTCCTG	10	+	62871368-62871417	10qB4	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 12 (Dnajc12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Jdp1; mJDP1	Jdp1; mJDP1
Mus musculus	RefSeq	ILMN_200237	ILMN_215271	DNAJC12	NM_013888.2	NM_013888.2		30045	142363832	NM_013888.2	Dnajc12	NP_038916.1	ILMN_2538061	007210634	S	143	GCGATGAGCTCTCCTCGGTTGAGCAAATCTTGGCAGAATTTAAGATTAGA	10	+	62849507-62849523:62858533-62858565	10qB4	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 12 (Dnajc12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Jdp1; mJDP1	Jdp1; mJDP1
Mus musculus	RefSeq	ILMN_215271	ILMN_215271	DNAJC12	NM_013888.2	NM_013888.2		30045	142363832	NM_013888.2	Dnajc12	NP_038916.1	ILMN_1229993	001230441	S	752	AAATGTTGTGTTTGTGAGTTACTCAGAATGGTCAAGTCCCCCATCCTCCC	10	+	62871105-62871154	10qB4	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 12 (Dnajc12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Jdp1; mJDP1	Jdp1; mJDP1
Mus musculus	RefSeq	ILMN_194300	ILMN_233319	SOX4	NM_009238.2	NM_009238.2		20677	56118238	NM_009238.2	Sox4	NP_033264.2	ILMN_2727116	001850315	S	1797	ACTTTGAGAGCATGTCCCTGGGCAGTTTCAGCTCCTCATCGGCGCTCGAT	13	-	29043705-29043754	13qA3.1	Mus musculus SRY-box containing gene 4 (Sox4), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whose specific outcome is the progression of the exocrine pancreas over time, from its formation to the mature structure. The exocrine pancreas produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells [goid 31017] [evidence IMP]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]	AA682046; Sox-4	AA682046; Sox-4
Mus musculus	RefSeq	ILMN_233319	ILMN_233319	SOX4	NM_009238.2	NM_009238.2		20677	56118238	NM_009238.2	Sox4	NP_033264.2	ILMN_2893417	001010403	S	1183	CAGCTCCAAGCCCGCGCCCAAGAAGAGCTGTGGCCCCAAGGTGGCGGGCA	13	-	29044319-29044368	13qA3.1	Mus musculus SRY-box containing gene 4 (Sox4), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whose specific outcome is the progression of the exocrine pancreas over time, from its formation to the mature structure. The exocrine pancreas produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells [goid 31017] [evidence IMP]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]	AA682046; Sox-4	AA682046; Sox-4
Mus musculus	MEEBO	ILMN_211254	ILMN_211254	2810005O12RIK	scl0072651.1_37	NM_028311.1			13386301	NM_028311.1	2810005O12Rik		ILMN_2614039	004890672	S	689	GAAGGTTTGCTACAGGTTGGCCCGTTAGATAGAAAAGCGGTGCCTTCTTC										
Mus musculus	RefSeq	ILMN_191779	ILMN_312271	LOC623568	XM_001480472.1	XM_001480472.1		623568	149267406	XM_001480472.1	LOC623568	XP_001480522.1	ILMN_1255034	004900189	S	31	GCCGCGCCTCAGCCATGGCATTTAAAGATACCGGAAAGACGCCCGTGGAG	16	+	17137407-17137420:17137421-17137456	16qA3	PREDICTED: Mus musculus similar to ribosomal protein S20 (LOC623568), mRNA.					
Mus musculus	RefSeq	ILMN_197856	ILMN_197856	LOC277668	XM_204040.4	XM_204040.4		277668	94372716	XM_204040.4	LOC277668	XP_204040.2	ILMN_1219570	000630167	S	1289	CCAAGTTGACACAGCTGAGCTATGAGATGTACCCCGCCCCTCATGAGTGC	4	-	143244151-143244200	4qE1	PREDICTED: Mus musculus similar to Predicted gene, OTTMUSG00000010433 (LOC277668), mRNA.					
Mus musculus	MEEBO	ILMN_185485	ILMN_185485	SLC5A9	scl23984.16_259				31559939	NM_145551	Slc5a9		ILMN_2427410	007040598	S	17	GCCTTCAGTGGGGTTGGGACATAGTCAGAATCCTACAGGGTGTCAACAGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_245939	ILMN_245939	MSR2	NM_030707.1	NM_030707.1		80891	13540504	NM_030707.1	Msr2	NP_109632.1	ILMN_2831436	006130746	S	1722	CCCAGTGGACTTCCAGACTTCAGCTGTGGCTTATCCTTCAAGAGGACTCG	3	-	87337180-87337229	3qF1	Mus musculus macrophage scavenger receptor 2 (Msr2), mRNA.				IFGP2; IgSR; Fcrh2; MMAN-g; FcRH2sc; 9330158F12; moFcRH2sc; 2810439C17Rik	IFGP2; IgSR; Fcrh2; MMAN-g; FcRH2sc; 9330158F12; moFcRH2sc; 2810439C17Rik
Mus musculus	RefSeq	ILMN_211623	ILMN_317188	LOC667118	XR_035411.1	XR_035411.1		667118	149234316	XR_035411.1	LOC667118		ILMN_1220878	000010609	S	3125	CGCTCCTGACTATAGATTGCCATCAGAGACTTACTTTTTCACCAAAGCTG	1	-	135554796-135554845	1qE4	PREDICTED: Mus musculus similar to Zinc finger BED domain containing protein 4 (LOC667118), misc RNA.					
Mus musculus	RefSeq	ILMN_211623	ILMN_317188	LOC667118	XR_035411.1	XR_035411.1		667118	149234316	XR_035411.1	LOC667118		ILMN_2617766	004290494	S	2975	GGTGCACGCACAAGAGAGAGAAACGACGACACATTGTGAAAATGCAGCCG	1	-	135554946-135554995	1qE4	PREDICTED: Mus musculus similar to Zinc finger BED domain containing protein 4 (LOC667118), misc RNA.					
Mus musculus	MEEBO	ILMN_196267	ILMN_196267	TREML1	scl50634.6.1_239	XM_128641.3			38082537	XM_128641.3	Treml1		ILMN_2523169	006400307	S	13	GGGCTCCAATCTGGTATCTTGGTTTGGTGCAGTCAGGGAGTGGTGCTCCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; A secretory organelle found in blood platelets, which is unique in that it exhibits further compartmentalization and acquires its protein content via two distinct mechanisms: (1) biosynthesis predominantly at the megakaryocyte (MK) level (with some vestigial platelet synthesis) (e.g. platelet factor 4) and (2) endocytosis and pinocytosis at both the MK and circulating platelet levels (e.g. fibrinogen (Fg) and IgG) [goid 31091] [evidence IDA]	The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence TAS]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [pmid 15100151] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence TAS]		
Mus musculus	RefSeq	ILMN_186338	ILMN_234231	CCNE1	NM_007633.2	NM_007633.2		12447	110227585	NM_007633.2	Ccne1	NP_031659.2	ILMN_2716497	002360762	S	1492	TTGGAGGTCAGGAGCCCCTGCAGATGCTGTGCTCTATGGAGAGGTGCATC	7	-	38883417-38883466	7qB2	Mus musculus cyclin E1 (Ccne1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IDA]	AW538188	AW538188
Mus musculus	Riken	ILMN_205202	ILMN_205202	D030026J11RIK	ri|D030026J11|PX00179J05|AK050856|1070					AK050856	D030026J11Rik		ILMN_1257387	001070603	S	735	CTGTCGATTCCCAGTCAGGCTCCAGGAACTGCATTCCTTTTCAAGCTGGC										
Mus musculus	RefSeq	ILMN_186579	ILMN_186579	ZBTB17	NM_009541.1	NM_009541.1		22642	6678626	NM_009541.1	Zbtb17	NP_033567.1	ILMN_1232592	000830687	S	2628	GGCACCCTAGGACTCAGAAGGTGCTCCTGCCCCATTCCCTAGAGAATAAA	4	+	141023076-141023125	4qE1	Mus musculus zinc finger and BTB domain containing 17 (Zbtb17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	mZ13; Lp-1; Zfp100; Miz1; AA589413	mZ13; Lp-1; Zfp100; Miz1; AA589413
Mus musculus	Riken	ILMN_205193	ILMN_205193	D030027P05RIK	ri|D030027P05|PX00179F12|AK050870|2467					AK050870	D030027P05Rik		ILMN_2570699	004900491	S	1354	AAAACAGGGGCTCGGTAAAGACTGCTATGCTCCCAACCCTCTGCCTCCAG										
Mus musculus	RefSeq	ILMN_199606	ILMN_199606	LOC382783	XM_356673.1	XM_356673.1			38074981	XM_356673.1	LOC382783		ILMN_1258648	006980484	S	913	CCCTCTGTTAGTGAATCTGTTTGCATCCCTATGCCTGAGCCAGGACCCCC										
Mus musculus	RefSeq	ILMN_219391	ILMN_219391	ANGPTL3	NM_013913.3	NM_013913.3		30924	142388354	NM_013913.3	Angptl3	NP_038941.1	ILMN_2708190	003990482	S	558	CAGCAAGACAACAGCATAAGAGAACTCCTCCAGAGTGTGGAAGAACAGTA	4	+	98698789-98698838	4qC6	Mus musculus angiopoietin-like 3 (Angptl3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; Any process that decreases the frequency, rate or extent of phospholipase activity, the hydrolysis of a phospholipid [goid 10519] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]	hypl	hypl
Mus musculus	RefSeq	ILMN_184937	ILMN_184937	RELT	NM_177073.5	NM_177073.5		320100	146198796	NM_177073.5	Relt	NP_796047.2	ILMN_2422834	000070736	S	1498	ACTGAGGACCAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCCGCC				7qE3	Mus musculus RELT tumor necrosis factor receptor (Relt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Cell death resulting from activation of endogenous cellular processes [goid 12501] [evidence RCA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Tnfrsf19l; E430021K24Rik	Tnfrsf19l; E430021K24Rik
Mus musculus	RefSeq	ILMN_184937	ILMN_184937	RELT	NM_177073.5	NM_177073.5		320100	146198796	NM_177073.5	Relt	NP_796047.2	ILMN_1242889	007200601	S	1495	GGGACTGAGGACCAAGATGCAAAGGCCAAGTCCTGGAGGTGGGACCGTCC				7qE3	Mus musculus RELT tumor necrosis factor receptor (Relt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Cell death resulting from activation of endogenous cellular processes [goid 12501] [evidence RCA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Tnfrsf19l; E430021K24Rik	Tnfrsf19l; E430021K24Rik
Mus musculus	RefSeq	ILMN_184937	ILMN_184937	RELT	NM_177073.5	NM_177073.5		320100	146198796	NM_177073.5	Relt	NP_796047.2	ILMN_1215548	005960725	S	2692	CCCATAGTCATTCCAAAAAGTTGTCTAAAAAAGGGTAAACTTAGTATTTT				7qE3	Mus musculus RELT tumor necrosis factor receptor (Relt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Cell death resulting from activation of endogenous cellular processes [goid 12501] [evidence RCA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Tnfrsf19l; E430021K24Rik	Tnfrsf19l; E430021K24Rik
Mus musculus	RefSeq	ILMN_216801	ILMN_216801	CAPN7	NM_009796.2	NM_009796.2		12339	71061447	NM_009796.2	Capn7	NP_033926.1	ILMN_2675535	000770692	S	2714	CGGAGTCTGGTGCTCGTTGTGGTGTTTGGTAAGGATTTTAGATAGTGGAA	14	+	32184322-32184371	14qB	Mus musculus calpain 7 (Capn7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]	PalBH; AU022319	PalBH; AU022319
Mus musculus	RefSeq	ILMN_213309	ILMN_243536	CGRRF1	NM_026832.3	NM_026832.3		68755	142351150	NM_026832.3	Cgrrf1	NP_081108.2	ILMN_2635850	004670047	S	904	ACGCCTGCCTGTGCGACAGCTGTGTGCGCTACTTCAAGCAGTGTCCCATG	14	+	47473567-47473616	14qC1	Mus musculus cell growth regulator with ring finger domain 1 (Cgrrf1), mRNA.		The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CGR19; 1810009H17Rik; 1110038G02Rik	CGR19; 1810009H17Rik; 1110038G02Rik
Mus musculus	RefSeq	ILMN_210724	ILMN_210724	MKLN1	NM_013791.2	NM_013791.2		27418	119637810	NM_013791.2	Mkln1	NP_038819.1	ILMN_1245998	005820367	S	3832	CTATTCAAAGACTTCGCAGCTTCCTAACGTGATTCTCCTAAGTAACAGCC	6	+	31459341-31459390	6qA3.3	Mus musculus muskelin 1, intracellular mediator containing kelch motifs (Mkln1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			AU015903; BB154892; A130067F06Rik	AU015903; BB154892; A130067F06Rik
Mus musculus	RefSeq	ILMN_210724	ILMN_210724	MKLN1	NM_013791.2	NM_013791.2		27418	119637810	NM_013791.2	Mkln1	NP_038819.1	ILMN_2697990	006840537	S	2389	CTGACCTCAATCCCCTTTTCCTCTTATTTCTGCATTAGGCTAATAAAGTG	6	+	31457898-31457947	6qA3.3	Mus musculus muskelin 1, intracellular mediator containing kelch motifs (Mkln1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			AU015903; BB154892; A130067F06Rik	AU015903; BB154892; A130067F06Rik
Mus musculus	RefSeq	ILMN_200996	ILMN_200996	LOC382287	XM_356407.1	XM_356407.1			38087841	XM_356407.1	LOC382287		ILMN_2540733	001690273	S	10837	GGTCTCTCTGCACAGGGTATTGTACATCTGTCCCCATGTCCACAAAGGTC										
Mus musculus	RefSeq	ILMN_223435	ILMN_223435	OLFR1136	NM_146659.2	NM_146659.2		258653	148225649	NM_146659.2	Olfr1136	NP_666870.2	ILMN_1215477	005670372	S	626	GCACCATCTCAGGAGTTCTTGTATCCTACTGTTACATCATCTCATCTGTC				2qD	Mus musculus olfactory receptor 1136 (Olfr1136), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR177-3	MOR177-3
Mus musculus	RefSeq	ILMN_218434	ILMN_310948	LOC100041004	XM_001475697.1	XM_001475697.1		100041004	149254668	XM_001475697.1	LOC100041004	XP_001475747.1	ILMN_2830821	000460754	S	380	ACACACCTATTCTGTGGCTGGATCTGGCTGGTGACACAGTTCAACCCCTC	5	-	143285625-143285674	5qG2	PREDICTED: Mus musculus similar to pS2m (LOC100041004), mRNA.					
Mus musculus	RefSeq	ILMN_229687	ILMN_229687	CCL27	NM_001048179.1	NM_001048179.1		20301	114431221	NM_001048179.1	Ccl27	NP_001041644.1	ILMN_3146018	003170739	A	444	CTGGCTCGGTGGTTAGAACGCCAAGGGAAAAGGCTCCAAGGGACTGTACC	4	-	41716428-41716477	4qA5	Mus musculus chemokine (C-C motif) ligand 27 (Ccl27), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	mILC; ILC; PESKY; Ccl27b; Scya27b; Scya27; CTACK; MGC130150; ESkine; CTAK; ALP; Scya27a; Ccl27a; AW558992	mILC; ILC; PESKY; Ccl27b; Scya27b; Scya27; CTACK; MGC130150; ESkine; CTAK; ALP; Scya27a; Ccl27a; AW558992
Mus musculus	MEEBO	ILMN_189704	ILMN_189704	GAMMA GLUTAMYL TRANSPEPTIDASE TYPE III	scl0003833.1_15				998507	S78533	gamma glutamyl transpeptidase type III		ILMN_2463649	006940047	S	9	TGGCTGTGCCCCAGCTGCTGAATGACACCAAAAGCCCTCCTCATCGTCTC										
Mus musculus	RefSeq	ILMN_212992	ILMN_212992	FBXO22	NM_028049.2	NM_028049.2		71999	139948464	NM_028049.2	Fbxo22	NP_082325.2	ILMN_2632389	003450750	S	1927	CTTTTTACTTTTCTGATGAACAGTCTGTTTTGTTACTGTATAAAGTCGTT	9	+	55072065-55072114	9qB	Mus musculus F-box protein 22 (Fbxo22), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		1600016C16Rik; 0610033L19Rik	1600016C16Rik; 0610033L19Rik
Mus musculus	RefSeq	ILMN_201369	ILMN_201369	LOC382557	XM_356568.1	XM_356568.1			38092774	XM_356568.1	LOC382557		ILMN_1217809	004280097	S	11	CCTTTATCCAGTTCCTCCAGGACACTCTGGATGCCCTCTTCAACATCATG										
Mus musculus	RefSeq	ILMN_210145	ILMN_210145	ASB10	NM_080444.2	NM_080444.2		117590	31981517	NM_080444.2	Asb10	NP_536692.1	ILMN_2919777	006400360	S	2143	CACAGATGTGGAAGACAAAGTAACCCCCGGCTTGGATGAGGATGGGGCCC	5	-	24042887-24042936	5qA3	Mus musculus ankyrin repeat and SOCS box-containing protein 10 (Asb10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		Asb-10; BB137407	Asb-10; BB137407
Mus musculus	Riken	ILMN_205912	ILMN_205912	A830025K10RIK	ri|A830025K10|PX00154I20|AK043725|1168					AK043725	A830025K10Rik		ILMN_2576142	006020500	S	892	CTTTTCACACGAGGCAGTCCTTGTAGCTTTGCTGTATGGAGCCTGGTTAC										
Mus musculus	RefSeq	ILMN_210616	ILMN_245772	TMEM103	XM_895137.2	XM_895137.2		72341	94386623	XM_895137.2	Tmem103	XP_900230.1	ILMN_1251253	005270403	S	1941	CCCAGCGTCCTGAGATGATCCTGATCACACCTCGTTCCGTAGTAAAGGTC	9	+	110224464-110224513	9qF2	PREDICTED: Mus musculus transmembrane protein 103, transcript variant 2 (Tmem103), mRNA.					
Mus musculus	MEEBO	ILMN_187397	ILMN_187397	STK3	scl47309.12_307				9790102	NM_019635	Stk3		ILMN_1237154	000730446	S	1	CCCAGGATCCCACTCACCATTATCAGAGTCCACTTACAAACTATGAGACA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187397	ILMN_187397	STK3	scl47309.12_307				9790102	NM_019635	Stk3		ILMN_2708895	006330408	S	1392	GCGTGAGCCAGGCCCTATGTCCAACAGTGTTTTCCTGACAACTGGAGAGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209620	ILMN_209620	BCL2	NM_177410.2	NM_177410.2		12043	133893253	NM_177410.2	Bcl2	NP_803129.2	ILMN_2682162	005570358	S	2007	ATGAGTCTGGGCTTTGATCTCAAGGCCAAGATGCGCAGGTTGGGGTGTGA	1	-	108608811-108608857:108608858-108608860	1qE2.1	Mus musculus B-cell leukemia/lymphoma 2 (Bcl2), transcript variant 2, mRNA.	The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin [goid 5955] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IDA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IDA]	An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IDA]; Branching of the ureteric bud [goid 1658] [evidence IGI]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; Any process that modulates the frequency, rate or extent of viral genome replication [goid 45069] [evidence IDA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [evidence IDA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IGI]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IGI]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of melanocyte differentiation [goid 45636] [evidence IMP]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence ISO]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence ISO]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus [goid 42221] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46671] [evidence IMP]; The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 6582] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [evidence ISO]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence ISO]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any process that modulates the frequency, rate or extent of nitrogen utilization [goid 6808] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus [goid 9605] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [evidence ISO]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IGI]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus [goid 48545] [evidence IMP]; The process of regulating the proliferation and elimination of cells of the immune system such that the total number of cells of a particular cell type within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1776] [evidence IMP]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The regrowth of axons following their loss or damage [goid 31103] [evidence IDA]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence IMP]; Any process that modulates the activity of an enzyme [goid 50790] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that activates or increases the deposition of coloring matter occurring during development [goid 48087] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; The process by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48547] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that modulates the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43067] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IDA]; Any process that activates or increases the deposition of coloring matter occurring during development [goid 48087] [evidence IMP]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IGI]; The process by which an immature T cell becomes committed to becoming a CD8-positive, alpha-beta T cell [goid 43375] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence ISO]; The process whereby a precursor cell type acquires the specialized features of a lymphoid progenitor cell. Lymphoid progenitor cells include progenitor cells for any of the lymphoid lineages [goid 2320] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence ISO]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IMP]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of neuron maturation [goid 14042] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IGI]; The process whose specific outcome is the progression of the cochlear nucleus over time, from its formation to the mature structure [goid 21747] [evidence IMP]; Any process that activates, maintains or increases the rate of skeletal muscle fiber development. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48743] [evidence IMP]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IMP]; The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process [goid 2520] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IGI]; The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 48599] [evidence IMP]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The process whereby a lymphoid progenitor cell becomes committed to become any type of B cell [goid 2326] [evidence IMP]; The process by which a lymphoid progenitor cell becomes committed to becoming any type of T cell [goid 2360] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [evidence IDA]; The process aimed at the progression of a mesenchymal cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14031] [evidence IMP]; The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process [goid 2520] [evidence IMP]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a pigment granule [goid 48753] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of smooth muscle cell migration [goid 14911] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence ISO]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a myeloid cell apoptosis [goid 33033] [evidence IDA]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of osteoblast proliferation [goid 33689] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]; The process by which the anatomical structures of a gland are generated and organized. Morphogenesis pertains to the creation of form [goid 22612] [evidence IMP]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IMP]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IGI]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	AW986256; D830018M01Rik; D630044D05Rik; C430015F12Rik; Bcl-2	AW986256; D830018M01Rik; D630044D05Rik; C430015F12Rik; Bcl-2
Mus musculus	RefSeq	ILMN_200443	ILMN_200443	LOC381717	XM_355692.1	XM_355692.1			38081964	XM_355692.1	LOC381717		ILMN_1234750	000380762	S	369	GAGAACTGTGGTGACCGGGGCTCCCTAGAGATCAGGATTCTGAGTGCATG										
Mus musculus	Riken	ILMN_203886	ILMN_203886	A630056H20RIK	ri|A630056H20|PX00147A21|AK042081|2632					AK042081	A630056H20Rik		ILMN_1251494	001050440	S	2383	GAGGTACCACTCACTGCTAAGGTGGACAGTCTAGAAGTCACTAGGGAAGC										
Mus musculus	RefSeq	ILMN_210042	ILMN_210042	GNL3	NM_153547.4	NM_153547.4		30877	146149197	NM_153547.4	Gnl3	NP_705775.2	ILMN_2673441	007550554	S	3	ACTTTCCGGCAGGTCCTGGAGCGCGTGACGTTGAACCGCAGTTCCAGTTC				14qB	Mus musculus guanine nucleotide binding protein-like 3 (nucleolar) (Gnl3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC46970; C77032; Ns; BC037996	MGC46970; C77032; Ns; BC037996
Mus musculus	RefSeq	ILMN_211360	ILMN_324298	LOC100048807	XM_001471648.1	XM_001471648.1		100048807	149252041	XM_001471648.1	LOC100048807	XP_001471698.1	ILMN_1225422	000990288	S	2369	CCTAGCCATTTCTCCTTTATCTGAAGCCCCCTCTACATCTAGGCACCCAG	3|NT_114258.1	+	164654-164703		PREDICTED: Mus musculus hypothetical protein LOC100048807 (LOC100048807), mRNA.					
Mus musculus	MEEBO	ILMN_187154	ILMN_187154	1110032E23RIK	scl23069.5_206				18875327	NM_133187	1110032E23Rik		ILMN_2441625	002750193	S	20	CAGATGTAAATAGAAGATAAGGGCTTATTCTGGTGTGACCTGCTTCCTGT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_186275	ILMN_186275	SIX4	scl42349.4.1_161				33859631	NM_011382	Six4		ILMN_2434136	005260390	S	12	CAGATCATCTCATAAAAATAATTCAGGAAGTCTGGGGAAAAGTCACTATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The orderly movement of myoblasts from one site to another, often during the development of a multicellular organism. A myoblast is a cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51451] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_187793	ILMN_244546	IPO4	NM_024267.6	NM_024267.6		75751	142376112	NM_024267.6	Ipo4	NP_077229.4	ILMN_2703099	006770082	S	3072	GAGTGGCTCACTATAGGTCACCTCTTCAGCTTCCTGCACCAGAACAATCC	14	-	56246183-56246232	14qC3	Mus musculus importin 4 (Ipo4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane [goid 6610] [evidence ISA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence ISA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC113723; AA409693; 8430408O15Rik; Imp4a; RanBP4	MGC113723; AA409693; 8430408O15Rik; Imp4a; RanBP4
Mus musculus	RefSeq	ILMN_214675	ILMN_214675	NAIF1	NM_194335.2	NM_194335.2		71254	144922677	NM_194335.2	Naif1	NP_919316.1	ILMN_1238809	003840154	S	2391	GGTGAGGCCACCATCATCAGCCTACCCAGTACCACAGAGATCCATCCCGT	2	+	32308367-32308416	2qB	Mus musculus nuclear apoptosis inducing factor 1 (Naif1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISS]		2310007O20Rik	2310007O20Rik
Mus musculus	RefSeq	ILMN_214675	ILMN_214675	NAIF1	NM_194335.2	NM_194335.2		71254	144922677	NM_194335.2	Naif1	NP_919316.1	ILMN_1248425	007040280	S	3057	CGTGGATAGCTCCCTCTTGGATAGATACATGGGGTTTGTTGGTGTGAGAA	2	+	32310880-32310929	2qB	Mus musculus nuclear apoptosis inducing factor 1 (Naif1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISS]		2310007O20Rik	2310007O20Rik
Mus musculus	RefSeq	ILMN_252788	ILMN_252788	TRAK1	NM_175114.3	NM_175114.3		67095	124517684	NM_175114.3	Trak1	NP_780323.2	ILMN_2937122	004570575	S	4627	GCGGTAGGTAGAAGAGGAAAGGAGGGTGACAACTTTGGCTTGGATGGACC	9	+	121383778-121383827	9qF4	Mus musculus trafficking protein, kinesin binding 1 (Trak1), mRNA.			Interacting selectively with the gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor [goid 50811] [evidence IDA]	mKIAA1042; 2310001H13Rik; AI467545; hyrt	mKIAA1042; 2310001H13Rik; AI467545; hyrt
Mus musculus	RefSeq	ILMN_244543	ILMN_244543	EG435391	NM_001013826.1	NM_001013826.1		435391	85701507	NM_001013826.1	EG435391	NP_001013848.1	ILMN_2952900	000870367	S	755	TCAGAGAGGATCAGAGACCCTGGCACCCAGAGCAGAAGGCTGAAGCACGT	14	-	20465422-20465471	14qA3	Mus musculus predicted gene, EG435391 (EG435391), mRNA.					
Mus musculus	RefSeq	ILMN_244543	ILMN_244543	EG435391	NM_001013826.1	NM_001013826.1		435391	85701507	NM_001013826.1	EG435391	NP_001013848.1	ILMN_2952901	005890048	S	903	GCCTCATGGTAGGCCAAGTCAGCTGCAGGGGGATCTGGGTAAGGAAAAGG	14	-	20465274-20465323	14qA3	Mus musculus predicted gene, EG435391 (EG435391), mRNA.					
Mus musculus	MEEBO	ILMN_193782	ILMN_193782	9430080K19RIK	scl18038.1.15_227						9430080K19Rik		ILMN_2500370	000050242	S	20	CATAGATGGCCCCTCCCTGCCTGTGTTTCAGGTGTAAAATCGACACTCTG										
Mus musculus	MEEBO	ILMN_209451	ILMN_209451	A830060N17	scl48656.5.1_86				51829982	XM_488771	A830060N17		ILMN_1226371	000520142	S	2148	GACCGGTTCCCAATGTCTGCTGTTTTACAAGCAATGTGGTTTGTTGTTGC										
Mus musculus	RefSeq	ILMN_200460	ILMN_200460	EG383229	XM_356935.3	XM_356935.3		383229	94401820	XM_356935.3	EG383229	XP_356935.3	ILMN_1233310	005130195	S	156	CCCCCAGGTCCAGGCTCACGGCAAGAAGGTAATGGATGTGCTGACTGATG	17	-	26423666-26423715	17qA3.3	PREDICTED: Mus musculus predicted gene, EG383229 (EG383229), mRNA.					
Mus musculus	RefSeq	ILMN_208642	ILMN_208642	4930529M08RIK	NM_175280.3	NM_175280.3		78774	110630011	NM_175280.3	4930529M08Rik	NP_780489.2	ILMN_2842210	004830167	S	1248	GTGCTCTCAGGGCTCACAGTATGGTTAGATGTCCTGCCCTCCTGCACACC	2	+	145776904-145776920:145788856-145788888	2qG1	Mus musculus RIKEN cDNA 4930529M08 gene (4930529M08Rik), mRNA.				MGC58680; BC024760; MGC129509; MGC129508; BB178539	MGC58680; BC024760; MGC129509; MGC129508; BB178539
Mus musculus	RefSeq	ILMN_203772	ILMN_208642	4930529M08RIK	NM_175280.3	NM_175280.3		78774	110630011	NM_175280.3	4930529M08Rik	NP_780489.2	ILMN_1241009	001580020	S	372	GCTGTTTATGCACTTCTTTGTGGCTGTGGATGAATATGCCACTGGCTGCC	2	+	145765681-145765727:145772604-145772606	2qG1	Mus musculus RIKEN cDNA 4930529M08 gene (4930529M08Rik), mRNA.				MGC58680; BC024760; MGC129509; MGC129508; BB178539	MGC58680; BC024760; MGC129509; MGC129508; BB178539
Mus musculus	MEEBO	ILMN_223250	ILMN_223250	2610524A10RIK	scl072507.17_285	NM_028258.1			30794383	NM_028258.1	2610524A10Rik		ILMN_2761422	001940477	S	3638	CCTGGAGAAAGCCCCAGAGTTGTGTTGTGTGGTGGAGCTTGGTCATGGGC										
Mus musculus	RefSeq	ILMN_192961	ILMN_241000	CSN1S1	NM_007784.2	NM_007784.2		12990	31982443	NM_007784.2	Csn1s1	NP_031810.1	ILMN_2638461	003840047	S	1068	CTCTCTATTCATTCTATGGAGCCTCTGTTTTACCTAAAGGCTTGACTGCT	5	+	88111251-88111300	5qE1	Mus musculus casein alpha s1 (Csn1s1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AW212882; Csna; AA959832	AW212882; Csna; AA959832
Mus musculus	Riken	ILMN_202611	ILMN_202611	G7E-PENDING	ri|E430024P20|PX00100E02|AK088743|1222					AK088743	G7e-pending		ILMN_1241246	005670356	S	612	CCTGGATCGGAATCCCAAGGATGGGGCTTGCCCCTAGAATTCTTCGTTAC										
Mus musculus	RefSeq	ILMN_186180	ILMN_321755	LOC100045413	XR_031727.1	XR_031727.1		100045413	149262978	XR_031727.1	LOC100045413		ILMN_1245007	003780138	S	5677	GCTCCAGGCCCCACTCCTTAAACATCAGCTGCTCTGACATGGTGTTCAGC					PREDICTED: Mus musculus similar to Greb1 protein (LOC100045413), misc RNA.					
Mus musculus	RefSeq	ILMN_246724	ILMN_246724	OTTMUSG00000015852	NM_001037502.1	NM_001037502.1		545475	82775352	NM_001037502.1	OTTMUSG00000015852	NP_001032591.1	ILMN_3003607	003850731	S	117	TCAGAACCTGCTTTTATGGCTTGGGGAAATGCAGGCGCATATGCAGGGCC	2	+	152211467-152211516	2qH1	Mus musculus predicted gene, OTTMUSG00000015852 (OTTMUSG00000015852), mRNA.				Defb28	Defb28
Mus musculus	MEEBO	ILMN_219312	ILMN_219312	FZD6	scl47963.9.1_68				31542830	NM_008056	Fzd6		ILMN_2775016	004180091	S	3772	CCTGCAAAAGAAAATGTGCGAAGGGCAGAGTCAGAGTTGGGCAGGAAGAG						The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The apical end of the lateral plasma membrane of epithelial cells [goid 16327] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates [goid 1736] [evidence IGI]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211264	ILMN_239530	5830417I10RIK	XM_001003850.1	XM_001003850.1		76022	94409530	XM_001003850.1	5830417I10Rik	XP_001003850.1	ILMN_2690829	004590093	S	386	CAAACAGCTGCCAGTTCTGGTGAGGTGCTGTGAAGAGATCCAGCCACATC				3qF1	PREDICTED: Mus musculus RIKEN cDNA 5830417I10 gene (5830417I10Rik), mRNA.					
Mus musculus	MEEBO	ILMN_223907	ILMN_223907	OLFR564	scl9408.1.1_320				22129584	NM_146359	Olfr564		ILMN_2771303	000540538	S	930	TTCCAGCATGACAAAGAGCTAGTTTGTTGTTTCATCGTTTTTCTACTTTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	Riken	ILMN_207237	ILMN_207237	G430060O14RIK	ri|G430060O14|PH00001L12|AK090017|1307					AK090017	G430060O14Rik		ILMN_1214904	006650020	S	1128	GGCCTTGCATCGTACTCTGAGGTAGTGGCCCTTAGTATGGTGTACCTTGC										
Mus musculus	RefSeq	ILMN_195907	ILMN_256671	ADD1	NM_001024458.2	NM_001024458.2		11518	142345213	NM_001024458.2	Add1	NP_001019629.1	ILMN_1215275	004640047	S	3676	GGACAGACTTGGAGGACAGGTCCTGTGTGTCCTCTCCTCATTGTAACAGG	5	+	34974909-34974957	5qB2	Mus musculus adducin 1 (alpha) (Add1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI256389	AI256389
Mus musculus	RefSeq	ILMN_218947	ILMN_218947	DMTF1	NM_011806.2	NM_011806.2		23857	31560525	NM_011806.2	Dmtf1	NP_035936.2	ILMN_1231803	007200471	S	2331	CGTTCCTTCACCTCATGGCTTTATCCAGGCATCTGATGTTATAGATACTG	5	-	9120379-9120428	5qA1	Mus musculus cyclin D binding myb-like transcription factor 1 (Dmtf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Dmp1; Dimp	Dmp1; Dimp
Mus musculus	RefSeq	ILMN_218947	ILMN_218947	DMTF1	NM_011806.2	NM_011806.2		23857	31560525	NM_011806.2	Dmtf1	NP_035936.2	ILMN_2758073	005910598	S	3315	CTTCGTGCATTACCTGCTGGGGGTACACTATAGCTTCTCCCTCAGGCACT	5	-	9119184-9119233	5qA1	Mus musculus cyclin D binding myb-like transcription factor 1 (Dmtf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Dmp1; Dimp	Dmp1; Dimp
Mus musculus	RefSeq	ILMN_218947	ILMN_218947	DMTF1	NM_011806.2	NM_011806.2		23857	31560525	NM_011806.2	Dmtf1	NP_035936.2	ILMN_3000325	006110187	S	3400	AACAAATCAAGAGTCATTCCTAAGGTAAAGCCAAAACTAGCCTGTAGGGC	5	-	9119099-9119148	5qA1	Mus musculus cyclin D binding myb-like transcription factor 1 (Dmtf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Dmp1; Dimp	Dmp1; Dimp
Mus musculus	RefSeq	ILMN_192816	ILMN_218947	DMTF1	NM_011806.2	NM_011806.2		23857	31560525	NM_011806.2	Dmtf1	NP_035936.2	ILMN_2491593	000360561	S	3623	CCCCTAGGCAACCAACTTTTGCTTATTACTACAGTTTTACATTAATAAAC	5	-	9118876-9118925	5qA1	Mus musculus cyclin D binding myb-like transcription factor 1 (Dmtf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Dmp1; Dimp	Dmp1; Dimp
Mus musculus	RefSeq	ILMN_218947	ILMN_218947	DMTF1	NM_011806.2	NM_011806.2		23857	31560525	NM_011806.2	Dmtf1	NP_035936.2	ILMN_2725672	006060278	S	1173	GGGTACCCGCTCAGAAAAGCAATGCCGTTCTAAATGGCTCAACTACCTGA	5	-	9129208-9129257	5qA1	Mus musculus cyclin D binding myb-like transcription factor 1 (Dmtf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Dmp1; Dimp	Dmp1; Dimp
Mus musculus	MEEBO	ILMN_222363	ILMN_222363	PRLPN	scl44168.6.1_23	XM_127254.1			20892902	XM_127254.1	Prlpn		ILMN_2748491	001580079	S	620	AGTGTATCCTGCTTGGTCAGAGCTTGCATCCTTACAGTCAGCCAATGAAG										
Mus musculus	RefSeq	ILMN_240948	ILMN_240948	2310007F21RIK	NM_025857.1	NM_025857.1		66939	110625672	NM_025857.1	2310007F21Rik	NP_080133.1	ILMN_2892904	005050095	S	2407	TCGCTACTGGTTAAGAAGGGAAATTAGGGAAGTCGGCTGTGGGTTGCCAG				9qC	Mus musculus RIKEN cDNA 2310007F21 gene (2310007F21Rik), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_200778	ILMN_200778	LOC385314	XM_358185.1	XM_358185.1			38086056	XM_358185.1	LOC385314		ILMN_1229679	006660121	S	184	GAAATGGCAAAGGCAGATAAATTAAAAGCAGCCTGCGTCACCAAGGCAGC										
Mus musculus	MEEBO	ILMN_208842	ILMN_208842	DPM1	scl0013480.2_206	NM_010072.2			31542569	NM_010072.2	Dpm1		ILMN_2590053	003190600	S	2094	TGAGCATGAAAGCCTTGCCATGTAGTCACATAGCTGGGCCCACAGTGCAT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; A protein complex that possesses dolichyl-phosphate beta-D-mannosyltransferase activity; contains a catalytic subunit, a regulatory subunit, and a third subunit that stabilizes the complex. In human and several other metazoa, the subunits are named DPM1, DPM2 and DPM3, respectively [goid 33185] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISO]; The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units [goid 19348] [evidence ISO]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISO]; The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units [goid 19348] [evidence ISO]; The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units [goid 19348] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [evidence ISO]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [evidence IMP]		
Mus musculus	RefSeq	ILMN_218159	ILMN_218159	INTS1	NM_026748.1	NM_026748.1		68510	39930422	NM_026748.1	Ints1	NP_081024.1	ILMN_1222829	001030292	S	6721	GCCCTGAGCCCCTTGAGGCTGGAGCATCCACTGGTACTGAAAGTCCTCTT	5	-	140227346-140227395	5qG2	Mus musculus integrator complex subunit 1 (Ints1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA1440; 1110015K06Rik	KIAA1440; 1110015K06Rik
Mus musculus	RefSeq	ILMN_198931	ILMN_232096	TNFAIP8L3	NM_001033535.2	NM_001033535.2		244882	142373761	NM_001033535.2	Tnfaip8l3	NP_001028707.1	ILMN_1245195	004120451	S	1578	CATCTCCAGCTACATCTGTTGAGAACCACCCTACGTCACAGGCTGCATTG	9	-	53874006-53874055	9qA5.3	Mus musculus tumor necrosis factor, alpha-induced protein 8-like 3 (Tnfaip8l3), mRNA.				Gm517; MGC141255; 9930029P06Rik	Gm517; MGC141255; 9930029P06Rik
Mus musculus	RefSeq	ILMN_196780	ILMN_196780	IFITM2	NM_030694.1	NM_030694.1		80876	13507625	NM_030694.1	Ifitm2	NP_109619.1	ILMN_1232667	000840349	S	222	GGTCCCTGTTCAATACACTCTTCTTCAACGCCTGCTGCCTGGGCTTCGTT	7	-	148141589-148141638	7qF5	Mus musculus interferon induced transmembrane protein 2 (Ifitm2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			fragilis3; MGC102396; Ifitm3l; mil-3	fragilis3; MGC102396; Ifitm3l; mil-3
Mus musculus	RefSeq	ILMN_200329	ILMN_250009	A730027B03RIK	XR_002349.2	XR_002349.2		319301	149261641	XR_002349.2	A730027B03Rik		ILMN_1239008	001940164	S	3175	GGGAAACTACAACAGCCTAATCCAAGCAGGATGACAAAGGACGCAGACCC	11	-	23447195-23447244	11qA3.2	PREDICTED: Mus musculus RIKEN cDNA A730027B03 gene (A730027B03Rik), misc RNA.					
Mus musculus	MEEBO	ILMN_224153	ILMN_224153	A030011M19	scl17195.8.1_29				31343207	NM_177723	A030011M19		ILMN_1245849	003060088	S	1163	TCCTGGGGTACCCGACGCAGAACGTCAGCCGCTCCCTGCGCCGCAAGTAC										
Mus musculus	RefSeq	ILMN_196501	ILMN_196501	4632427C23RIK	XM_129247.4	XM_129247.4			38085337	XM_129247.4	4632427C23Rik		ILMN_1213417	000360066	S	1068	TCCACTGGAGCCAGGTCAGAATGCCCAGCTTGAAGCCCCAGATAAGGATC										
Mus musculus	RefSeq	ILMN_196501	ILMN_196501	4632427C23RIK	XM_129247.4	XM_129247.4			38085337	XM_129247.4	4632427C23Rik		ILMN_1238918	001110553	S	2443	TACTTAGTAATATTTAGGGACTTCAGGACCCCATGTGTACCCTTAGGGTC										
Mus musculus	RefSeq	ILMN_185031	ILMN_234016	LOC633360	XM_907756.3	XM_907756.3		633360	149275124	XM_907756.3	LOC633360	XP_912849.2	ILMN_2423609	005820202	S	559	GCTGACATAGAACCAAGTCCTTCACAATGTGCTCCTGACAGTCCTGCTCC					PREDICTED: Mus musculus hypothetical LOC633360 (LOC633360), mRNA.					
Mus musculus	RefSeq	ILMN_198997	ILMN_315051	LOC100040961	XM_001475449.1	XM_001475449.1		100040961	149260689	XM_001475449.1	LOC100040961	XP_001475499.1	ILMN_1251055	004780333	S	40	CGGCCAGCAGGAGGCTGATGAAGGAGCTTGAAGAGATCCGCAAACGTGGA	10	+	27656174-27656223	10qA4	PREDICTED: Mus musculus similar to LOC446231 protein (LOC100040961), mRNA.					
Mus musculus	RefSeq	ILMN_196850	ILMN_196850	LOC237684	XM_137448.1	XM_137448.1			20910731	XM_137448.1	LOC237684		ILMN_1221329	006560609	S	1554	CACAATCCAGGCAGCCGACATTGATACCAGGTACAGTAGACAGCATTTCC										
Mus musculus	MEEBO	ILMN_192051	ILMN_192051	SCL0001434.1_18	scl0001434.1_18	AK009426.1			12844212	AK009426.1	scl0001434.1_18		ILMN_2484535	006270474	S	19	CCTGCCTTTAGCACCCGCCGCAGCTCTTCTGGGGGCCCCTCTCGAAGGAG										
Mus musculus	RefSeq	ILMN_215997	ILMN_215997	RNPEPL1	NM_181405.2	NM_181405.2		108657	31340969	NM_181405.2	Rnpepl1	NP_852070.1	ILMN_2666190	006200189	S	2347	GCTCTCTGTGCCTGTCTGCTAGGAGAGACCCCAGGCTGTGACTTCAGCCT	1	+	94817050-94817099	1qD	Mus musculus arginyl aminopeptidase (aminopeptidase B)-like 1 (Rnpepl1), mRNA.			Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]	AI894167; 1110014H17Rik	AI894167; 1110014H17Rik
Mus musculus	RefSeq	ILMN_211195	ILMN_211195	GTF2A1	NM_175335.2	NM_175335.2		83602	142365797	NM_175335.2	Gtf2a1	NP_780544.1	ILMN_1244651	002070204	S	1843	CAGGAATGGATGCTTGGTTTAATTAGGTTTTCCTGCTTGTTAAATGCAAC	12	-	92797500-92797549	12qD3	Mus musculus general transcription factor II A, 1 (Gtf2a1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12) [goid 5672] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	TfIIAa/b; AA536742	TfIIAa/b; AA536742
Mus musculus	RefSeq	ILMN_211195	ILMN_211195	GTF2A1	NM_175335.2	NM_175335.2		83602	142365797	NM_175335.2	Gtf2a1	NP_780544.1	ILMN_1236560	006060747	S	60	CGCTCCACCGGAGCGGCTGCGCGTCCACCCGACGCAGCGCTAGCCTAAAT	12	-	92825234-92825241:92828826-92828867	12qD3	Mus musculus general transcription factor II A, 1 (Gtf2a1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12) [goid 5672] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	TfIIAa/b; AA536742	TfIIAa/b; AA536742
Mus musculus	RefSeq	ILMN_211195	ILMN_211195	GTF2A1	NM_175335.2	NM_175335.2		83602	142365797	NM_175335.2	Gtf2a1	NP_780544.1	ILMN_1253367	003800270	S	1821	CAGCTTGGAGACGAAGTTGACCCAGGAATGGATGCTTGGTTTAATTAGGT	12	-	92797522-92797571	12qD3	Mus musculus general transcription factor II A, 1 (Gtf2a1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12) [goid 5672] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	TfIIAa/b; AA536742	TfIIAa/b; AA536742
Mus musculus	RefSeq	ILMN_209331	ILMN_209331	TRIML1	NM_177742.2	NM_177742.2		244448	31343148	NM_177742.2	Triml1	NP_808410.1	ILMN_2795436	001170095	S	1517	GCCCTGAGCCTTGAGCAAAGACAAGGCCAAGGAGCAGCCTAGTCATTAAC	8	-	44628907-44628956	8qA4	Mus musculus tripartite motif family-like 1 (Triml1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC050188; 4933403D14	BC050188; 4933403D14
Mus musculus	RefSeq	ILMN_222053	ILMN_222053	CFLAR	NM_009805.4	NM_009805.4		12633	131889125	NM_009805.4	Cflar	NP_033935.2	ILMN_2743945	005050678	S	1713	ATATAGTTAATAGGAGATTGTTTCGACTTAATTATTATTTGTATTATTTT	1	+	58789766-58789815	1qC1.3	Mus musculus CASP8 and FADD-like apoptosis regulator (Cflar), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	I-FLICE; Flip; 2310024N18Rik; Cash; AI646576; c-Flip; Casper; MGC103395; CLARP; A430105C05Rik; MRIT; FLAME	I-FLICE; Flip; 2310024N18Rik; Cash; AI646576; c-Flip; Casper; MGC103395; CLARP; A430105C05Rik; MRIT; FLAME
Mus musculus	RefSeq	ILMN_197843	ILMN_325899	NT5C1A	NM_001085502.1	NM_001085502.1		230718	148227159	NM_001085502.1	Nt5c1a	NP_001078971.1	ILMN_1226934	002710167	S	802	TGCGTCTGGAGTGCCCGATTCGCACGTATTTGGTGACCGCGCGAAGTGCA				4qD2.2	Mus musculus 5'-nucleotidase, cytosolic IA (Nt5c1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Cn1a; Gm49	Cn1a; Gm49
Mus musculus	RefSeq	ILMN_220134	ILMN_220134	CCDC67	NM_181816.2	NM_181816.2		234964	133778964	NM_181816.2	Ccdc67	NP_861537.2	ILMN_1238044	000510326	S	1614	GCTGCAGAGACACACCGAGTTCACGCTTAACAAATACACCAAACTCAAGC	9	-	15365669-15365718	9qA2	Mus musculus coiled-coil domain containing 67 (Ccdc67), mRNA.				4933401K09Rik	4933401K09Rik
Mus musculus	RefSeq	ILMN_221237	ILMN_221237	GUCY2E	NM_008192.1	NM_008192.1		14919	6680134	NM_008192.1	Gucy2e	NP_032218.1	ILMN_2732851	004900187	S	2490	CTCTAGTAACCTGGAGGATCTGATCCGAGAACGCACAGAGGAGTTAGAGC	11	-	69038517-69038566	11qB3	Mus musculus guanylate cyclase 2e (Gucy2e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA]	ROS-GC1; GC1; GC-E	ROS-GC1; GC1; GC-E
Mus musculus	RefSeq	ILMN_213771	ILMN_213771	RBM34	NM_172762.2	NM_172762.2		52202	42794006	NM_172762.2	Rbm34	NP_766350.2	ILMN_2640602	004250470	S	3082	CAATTTTACCTGATCACTCTGGAGCATTTTTGCATAAACTATATAAAGAT	8	-	129471372-129471421	8qE2	Mus musculus RNA binding motif protein 34 (Rbm34), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4930547K05Rik; 6330444B11; D8Ertd233e	4930547K05Rik; 6330444B11; D8Ertd233e
Mus musculus	RefSeq	ILMN_200838	ILMN_200838	LOC382229	XM_358717.1	XM_358717.1			38086459	XM_358717.1	LOC382229		ILMN_2540183	002340685	S	305	GACAAGGCTCGTTATGAAAGAGAATGAAAACCTACATCCACCCCCACACA										
Mus musculus	RefSeq	ILMN_197111	ILMN_325450	EG545385	XR_031493.1	XR_031493.1		545385	149245817	XR_031493.1	EG545385		ILMN_1258596	006510241	S	617	GCAGGTCGTCCAGGCTAGGAAGAGAGACTATGAACCTCCCAATCCTCATG	1	+	175629189-175629192:175631234-175631279		PREDICTED: Mus musculus predicted gene, EG545385 (EG545385), misc RNA.					
Mus musculus	RefSeq	ILMN_186521	ILMN_256837	CHRNA3	NM_145129.2	NM_145129.2		110834	70778735	NM_145129.2	Chrna3	NP_660111.2	ILMN_1244673	001240164	S	1705	TGCAAGGGCACTTTCTCAATAGCCCCACACTTTATCCGATCACTGCTTGG	9	-	54860518-54860567	9qB	Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 3 (Chrna3), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IPI]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of communication from a neuron to a smooth muscle in the bladder that contributes to the expulsion of urine from the body [goid 60084] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence IMP]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of acetylcholine [goid 14056] [evidence IMP]; Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity [goid 7171] [evidence IMP]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IMP]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IMP]	(a)3; A730007P14Rik; Acra3; Acra-3	(a)3; A730007P14Rik; Acra3; Acra-3
Mus musculus	RefSeq	ILMN_196864	ILMN_310706	LOC627245	XR_034503.1	XR_034503.1		627245	149262828	XR_034503.1	LOC627245		ILMN_1243813	001240129	S	1110	CCAGCATATGGGGACCAACGAGTGATGGCCTTGATCAGATTGTGGAGAGC	12	-	3522194-3522243	12qA1.1	PREDICTED: Mus musculus similar to Odc1 protein (LOC627245), misc RNA.					
Mus musculus	Riken	ILMN_202103	ILMN_202103	2810048G06RIK	ri|2810048G06|ZX00065F15|AK012922|1130					AK012922	2810048G06Rik		ILMN_1223100	000160450	S	1013	ATTGCTGCATTGGACACCAGGCCTTCAACAAGCGACCTCTGGCAGGACAT										
Mus musculus	RefSeq	ILMN_216237	ILMN_216237	SCHIP1	NM_013928.2	NM_013928.2		30953	24475628	NM_013928.2	Schip1	NP_038956.1	ILMN_2937320	004730066	S	1252	CGGTGCTATACAAGTCAAAATACATGCCTGCCTCGTAGTGAAGTCGTAGC	3	+	68714177-68714226	3qE1	Mus musculus schwannomin interacting protein 1 (Schip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISA]	SCHIP-1; Nf2ip	SCHIP-1; Nf2ip
Mus musculus	RefSeq	ILMN_216409	ILMN_318335	LOC671564	XM_001476621.1	XM_001476621.1		671564	149254116	XM_001476621.1	LOC671564	XP_001476671.1	ILMN_2670827	005910743	S	592	GGACCCCAGCATCTTAGCTTGACACCCAGCCATGCAAGCATGACAAAGGC	5	-	109160689-109160738	5qF	PREDICTED: Mus musculus similar to ring finger protein 212 (LOC671564), mRNA.					
Mus musculus	RefSeq	ILMN_211811	ILMN_211811	ABLIM3	NM_198649.2	NM_198649.2		319713	62990179	NM_198649.2	Ablim3	NP_941051.2	ILMN_1214945	007000670	S	2667	CACGCAGTATAATCCTCTTGTATAATGGGACACAACATGCTGCCTGCCGT	18	-	61960838-61960887	18qE1	Mus musculus actin binding LIM protein family, member 3 (Ablim3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	MGC69876; AW990719; KIAA0843; D930036B08Rik	MGC69876; AW990719; KIAA0843; D930036B08Rik
Mus musculus	RefSeq	ILMN_211811	ILMN_211811	ABLIM3	NM_198649.2	NM_198649.2		319713	62990179	NM_198649.2	Ablim3	NP_941051.2	ILMN_1233130	004050056	S	1789	ATAGCCAATTAGATGTGAGGTCCTCCACGCCAACCTCTTACCAGGCTCCC	18	-	61978661-61978710	18qE1	Mus musculus actin binding LIM protein family, member 3 (Ablim3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	MGC69876; AW990719; KIAA0843; D930036B08Rik	MGC69876; AW990719; KIAA0843; D930036B08Rik
Mus musculus	RefSeq	ILMN_211811	ILMN_211811	ABLIM3	NM_198649.2	NM_198649.2		319713	62990179	NM_198649.2	Ablim3	NP_941051.2	ILMN_2628522	002570504	S	2712	GCCGTGAGACTTGCTTTTCTGTACTGTCAGGCGAGCCCACATCATCGAGG	18	-	61960793-61960842	18qE1	Mus musculus actin binding LIM protein family, member 3 (Ablim3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	MGC69876; AW990719; KIAA0843; D930036B08Rik	MGC69876; AW990719; KIAA0843; D930036B08Rik
Mus musculus	Riken	ILMN_203173	ILMN_203173	A430107J10RIK	ri|A430107J10|PX00064B11|AK040583|1646					AK040583	A430107J10Rik		ILMN_2555280	004060673	S	1480	TGAGACAGGCTCTCAGTAAGTTGCCTGGGGTGGCCTCAAACTCCTGTAGC										
Mus musculus	RefSeq	ILMN_211312	ILMN_211312	SLCO4A1	NM_148933.1	NM_148933.1		108115	22507334	NM_148933.1	Slco4a1	NP_683735.1	ILMN_2661340	005820270	S	2993	GATCCCATCTGAGGTGCCACGCAGCTTGTGTGGACAGTGTGTTTCTATGT	2	+	180209463-180209512	2qH4	Mus musculus solute carrier organic anion transporter family, member 4a1 (Slco4a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISO]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISO]	MGC28799; Slc21a12; MGC28824; OATP-E	MGC28799; Slc21a12; MGC28824; OATP-E
Mus musculus	RefSeq	ILMN_211312	ILMN_211312	SLCO4A1	NM_148933.1	NM_148933.1		108115	22507334	NM_148933.1	Slco4a1	NP_683735.1	ILMN_2614548	001010491	S	151	TACTACACAGCTGCTAGAAGTGGACGTAGATGCAGGAGCCGGGACTGGCA	2	+	180195833-180195882	2qH4	Mus musculus solute carrier organic anion transporter family, member 4a1 (Slco4a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence ISO]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence ISO]	MGC28799; Slc21a12; MGC28824; OATP-E	MGC28799; Slc21a12; MGC28824; OATP-E
Mus musculus	RefSeq	ILMN_212404	ILMN_212404	CSNK1E	NM_013767.5	NM_013767.5		27373	146134466	NM_013767.5	Csnk1e	NP_038795.3	ILMN_2689333	001570373	S	1242	TGCCAATGTCTCCTCCTCAGACCTCACTGGGCGGCAAGAGGTCTCCCGGC				15qE1	Mus musculus casein kinase 1, epsilon (Csnk1e), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	tau; CKIe; AI426939; AW457082; KC1epsilon; AI551861	tau; CKIe; AI426939; AW457082; KC1epsilon; AI551861
Mus musculus	RefSeq	ILMN_212404	ILMN_212404	CSNK1E	NM_013767.5	NM_013767.5		27373	146134466	NM_013767.5	Csnk1e	NP_038795.3	ILMN_2712792	001660474	S	2362	CCCTGGGTCAGGGCTAAGTGTTGAATTTACCCTTCCTGGTTAACACCTGT				15qE1	Mus musculus casein kinase 1, epsilon (Csnk1e), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	tau; CKIe; AI426939; AW457082; KC1epsilon; AI551861	tau; CKIe; AI426939; AW457082; KC1epsilon; AI551861
Mus musculus	RefSeq	ILMN_240286	ILMN_240286	4932414N04RIK	NM_183113.1	NM_183113.1		75721	34147100	NM_183113.1	4932414N04Rik	NP_898936.1	ILMN_2888872	001450348	S	3427	GCTGCAACAGTTTGGAACACAGCAGAAGTTTCACGCCGCCAATCTCCAGG	2	+	68546336-68546385	2qC2	Mus musculus RIKEN cDNA 4932414N04 gene (4932414N04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_255829	ILMN_255829	RIPPLY1	NM_001037915.1	NM_001037915.1		622473	83776578	NM_001037915.1	Ripply1	NP_001033004.1	ILMN_3160638	003290692	S	596	CAGAGGCCACAACACATAAGGCCACAGCTCATTCCCCTGACCCACACTCG	X	-	136314253-136314302	XqF1	Mus musculus ripply1 homolog (zebrafish) (Ripply1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-343M4.1	RP23-343M4.1
Mus musculus	RefSeq	ILMN_214891	ILMN_214891	RXFP2	NM_080468.1	NM_080468.1		140498	17978287	NM_080468.1	Rxfp2	NP_536716.1	ILMN_1259786	005890035	S	2071	CGTGTTCTCTGATGCCATCTGCTGGATCCCTGTGTTTGTCGTTAAGATCC	5	+	150872897-150872946	5qG3	Mus musculus relaxin/insulin-like family peptide receptor 2 (Rxfp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IMP]	Gpr106; Lgr8; Great	Gpr106; Lgr8; Great
Mus musculus	RefSeq	ILMN_222172	ILMN_222172	SERPINA1D	NM_009246.3	NM_009246.3		20703	93102381	NM_009246.3	Serpina1d	NP_033272.1	ILMN_1225570	002690364	S	1042	CTGGAAACTATAACTTGAAGACACTCATGAGTCCACTGGGCATCACCCGG	12	-	105002943-105002992	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 1d (Serpina1d), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	PI4; Dom4; Spi1-4	PI4; Dom4; Spi1-4
Mus musculus	RefSeq	ILMN_208895	ILMN_229902	LARP2	NM_001040399.1	NM_001040399.1		214048	94536724	NM_001040399.1	Larp2	NP_001035489.1	ILMN_1241785	001580358	S	418	CCCGGAACAGCTCTAGATGTCAACCTGAAGCAAATAAACCAACGCACAGT	3	+	40771356-40771405	3qB	Mus musculus La ribonucleoprotein domain family, member 2 (Larp2), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4933421B21Rik; MGC117760; FLJ10378; AA690246; MGC38253; 1700108L22Rik	4933421B21Rik; MGC117760; FLJ10378; AA690246; MGC38253; 1700108L22Rik
Mus musculus	RefSeq	ILMN_187779	ILMN_252074	TNPO3	NM_177296.4	NM_177296.4		320938	118130371	NM_177296.4	Tnpo3	NP_796270.2	ILMN_2447042	001990202	S	3068	GGCATCCTAAGGAGTCCCTGTTTGGGATGTGAGGGAGAAACAGCGCGGTT	6	-	29491680-29491729	6qA3.3	Mus musculus transportin 3 (Tnpo3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC90049; KIAA4133; C430013M08Rik; 5730544L10Rik; mKIAA4133; C81142; Trn-SR; D6Ertd313e	MGC90049; KIAA4133; C430013M08Rik; 5730544L10Rik; mKIAA4133; C81142; Trn-SR; D6Ertd313e
Mus musculus	RefSeq	ILMN_252074	ILMN_252074	TNPO3	NM_177296.4	NM_177296.4		320938	118130371	NM_177296.4	Tnpo3	NP_796270.2	ILMN_2977762	002470768	S	3737	CCACAAACATGGGGTGGGAAGGGATAAAAAAGAGGGTGAGAGTCTGGAGG	6	-	29491011-29491060	6qA3.3	Mus musculus transportin 3 (Tnpo3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC90049; KIAA4133; C430013M08Rik; 5730544L10Rik; mKIAA4133; C81142; Trn-SR; D6Ertd313e	MGC90049; KIAA4133; C430013M08Rik; 5730544L10Rik; mKIAA4133; C81142; Trn-SR; D6Ertd313e
Mus musculus	RefSeq	ILMN_211438	ILMN_211438	PTK2	NM_007982.1	NM_007982.1		14083	6679740	NM_007982.1	Ptk2	NP_032008.1	ILMN_2615901	002470553	S	3786	CGCCTTCTCTCCTGTGGATACTGAAGCATTGGGTTGCGAACTATCTGTAG	15	-	73035910-73035959	15qD3	Mus musculus PTK2 protein tyrosine kinase 2 (Ptk2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	Any process involved in the controlled movement of a cell [goid 6928] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence TAS]; The directed movement of the nucleus to a specific location within a cell [goid 40023] [evidence IDA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organ of an organism [goid 46621] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell. Complex formation involves dimerization of a receptor protein tyrosine kinase followed by the association of several different intracellular signaling molecules with the cytoplasmic tails of the receptors [goid 7172] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; Generation of a long process from a neuron whose cell body resides in the central nervous system. The process carries efferent (outgoing) action potentials from the cell body towards target cells [goid 21955] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51964] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	FRNK; FAK; mKIAA4203; Fadk; KIAA4203	FRNK; FAK; mKIAA4203; Fadk; KIAA4203
Mus musculus	RefSeq	ILMN_194818	ILMN_194818	ZBP1	NM_021394.1	NM_021394.1		58203	11496252	NM_021394.1	Zbp1	NP_067369.1	ILMN_1228653	001580634	S	1269	CCCAGACCACAGAACCTGTGCTTAGAGAGCATGAAGTCCAGGACATAGAA	2	-	173033265-173033314	2qH3	Mus musculus Z-DNA binding protein 1 (Zbp1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags [goid 3692] [evidence IDA]	Dlm1; mZaDLM; 2010010H03Rik	Dlm1; mZaDLM; 2010010H03Rik
Mus musculus	RefSeq	ILMN_194818	ILMN_194818	ZBP1	NM_021394.1	NM_021394.1		58203	11496252	NM_021394.1	Zbp1	NP_067369.1	ILMN_2879614	001690086	S	1902	GGGGGGACACTGCTGAATGCACTGTACTTTTATAAAAAGGTGTACCTCTG	2	-	173032117-173032166	2qH3	Mus musculus Z-DNA binding protein 1 (Zbp1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags [goid 3692] [evidence IDA]	Dlm1; mZaDLM; 2010010H03Rik	Dlm1; mZaDLM; 2010010H03Rik
Mus musculus	RefSeq	ILMN_222368	ILMN_315433	LOC100047776	XM_001479255.1	XM_001479255.1		100047776	149259325	XM_001479255.1	LOC100047776	XP_001479305.1	ILMN_2748571	005890273	S	5690	GCAGACAATTTTGGGTGACAAGGCAGCCGCTATCCTGTTGCTGGCAACCA					PREDICTED: Mus musculus similar to hyaluronan synthase 3, transcript variant 2 (LOC100047776), mRNA.					
Mus musculus	RefSeq	ILMN_198848	ILMN_316772	LOC100040229	XM_001474320.1	XM_001474320.1		100040229	149258363	XM_001474320.1	LOC100040229	XP_001474370.1	ILMN_1216857	001030154	S	558	ACGTGTTCCTTGCAGAAGATGAAGCACCAGCAGTCGGACATGAGGCTGTG	8	-	12879972-12880021	8qA1.1	PREDICTED: Mus musculus hypothetical protein LOC100040229 (LOC100040229), mRNA.					
Mus musculus	RefSeq	ILMN_198185	ILMN_319178	LOC224870	XR_034288.1	XR_034288.1		224870	149269375	XR_034288.1	LOC224870		ILMN_1253483	004900128	S	994	GGATTGGTTTGGCAGAAGCATTAGGCACACTGATGCACGCCTGCGCTGGT					PREDICTED: Mus musculus similar to 3-phosphoglycerate dehydrogenase (LOC224870), misc RNA.					
Mus musculus	RefSeq	ILMN_223351	ILMN_223351	RHOX5	NM_008818.2	NM_008818.2		18617	91206463	NM_008818.2	Rhox5	NP_032844.2	ILMN_2762935	004390148	S	738	GCGACACCGAGATTTTGATTTGATCACATATGCCGGCTATGACAGCCCTT					Mus musculus reproductive homeobox 5 (Rhox5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; Programmed cell death of errant germ line cells that are outside the normal migratory path or ectopic to the gonad. This is an important mechanism of regulating germ cell survival within the embryo [goid 35234] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA409564; Pem	AA409564; Pem
Mus musculus	RefSeq	ILMN_198741	ILMN_198741	LOC245533	XM_141972.2	XM_141972.2			38087216	XM_141972.2	LOC245533		ILMN_2532759	003840364	S	1014	TGAGCAGCACAAGGTCCATCCCGTTAGGAAAAACAGCCTGGGACCACAGC										
Mus musculus	Riken	ILMN_205389	ILMN_205389	D930048H02RIK	ri|D930048H02|PX00204A11|AK053088|2645					AK053088	D930048H02Rik		ILMN_1216403	003850168	S	543	GGCAGGGCAGGACAGGTTAGAGAAGAAGGAAGTGGCCTATGAATCGCCCC										
Mus musculus	RefSeq	ILMN_198326	ILMN_249693	MEGF10	NM_001001979.1	NM_001001979.1		70417	50233827	NM_001001979.1	Megf10	NP_001001979.1	ILMN_1214887	002900168	S	1742	CATGGGGCTTTGGCTGTAACCTAACGTGTCAGTGCCTCAATGGCGGTGCC	18	+	57421690-57421739	18qD3	Mus musculus multiple EGF-like-domains 10 (Megf10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	3000002B06Rik; Gm331	3000002B06Rik; Gm331
Mus musculus	RefSeq	ILMN_217968	ILMN_249693	MEGF10	NM_001001979.1	NM_001001979.1		70417	50233827	NM_001001979.1	Megf10	NP_001001979.1	ILMN_2689931	004120300	S	7048	AAACCCTCCTCAGAATTAGTCTCGTTGTCATTTGTACTGCCAAATAGTCA	18	+	57457040-57457089	18qD3	Mus musculus multiple EGF-like-domains 10 (Megf10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	3000002B06Rik; Gm331	3000002B06Rik; Gm331
Mus musculus	RefSeq	ILMN_249693	ILMN_249693	MEGF10	NM_001001979.1	NM_001001979.1		70417	50233827	NM_001001979.1	Megf10	NP_001001979.1	ILMN_2840286	004480373	S	6840	ATGAAGCAGGGGCTACACACAGCAAACTGCCCCGTAGAGTCCTGGTCACC	18	+	57456832-57456881	18qD3	Mus musculus multiple EGF-like-domains 10 (Megf10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	3000002B06Rik; Gm331	3000002B06Rik; Gm331
Mus musculus	MEEBO	ILMN_211975	ILMN_211975	D230002A01RIK	scl33510.4.1_178	NM_176904.2			31342358	NM_176904.2	D230002A01Rik		ILMN_1223243	003830196	S	2770	GCTTTGGGTGTGTGAGTAGTGACTCTTGGAAGACAAGAGCATAAAAACGA										
Mus musculus	RefSeq	ILMN_211273	ILMN_211273	ANAPC2	NM_175300.2	NM_175300.2		99152	31341553	NM_175300.2	Anapc2	NP_780509.1	ILMN_2901312	002190470	S	2875	CTGGGACCTGTTTCAGCAAGAGTGAATAGGGTTGGCAGCTCAGAGTCTCC	2	+	25107816-25107865	2qA3	Mus musculus anaphase promoting complex subunit 2 (Anapc2), mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	AL024279; mKIAA1406; 9230107K09Rik; APC2	AL024279; mKIAA1406; 9230107K09Rik; APC2
Mus musculus	RefSeq	ILMN_216603	ILMN_222131	DDX17	NM_199080.2	NM_199080.2		67040	93587676	NM_199080.2	Ddx17	NP_951062.1	ILMN_2673079	002760095	S	1478	GATCCAGCTGATGGAGGAAATCATGGCGGAAAAGGAAAATAAGACTATAA	15	-	79367922-79367971	15qE1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (Ddx17), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	MGC79147; Gm926; 2610007K22Rik; C80929; AI047725; A430025E01Rik	MGC79147; Gm926; 2610007K22Rik; C80929; AI047725; A430025E01Rik
Mus musculus	RefSeq	ILMN_222131	ILMN_222131	DDX17	NM_199080.2	NM_199080.2		67040	93587676	NM_199080.2	Ddx17	NP_951062.1	ILMN_1234672	006180465	S	4557	CTGCTAACGCCCTTGCTGGTCTCTCCACACATTCCTGTCATTGAGACTTG	15	-	79358291-79358340	15qE1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (Ddx17), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	MGC79147; Gm926; 2610007K22Rik; C80929; AI047725; A430025E01Rik	MGC79147; Gm926; 2610007K22Rik; C80929; AI047725; A430025E01Rik
Mus musculus	MEEBO	ILMN_216959	ILMN_216959	AA536749	scl0001512.1_20	NM_201245.1			41152238	NM_201245.1	AA536749		ILMN_2677441	004610086	S	38	TTGGGGGCGGCCGCGGTGGAGCCAGCGGCCGGAGGCCGCGTCCGTCCATG										
Mus musculus	RefSeq	ILMN_259723	ILMN_259723	TOM1	NM_011622.2	NM_011622.2		21968	118130120	NM_011622.2	Tom1	NP_035752.1	ILMN_2959976	004730121	S	61	CGCGGCAATGGACTTTCTCCTGGGAAATCCGTTCAGCTCTCCGGTGGGAC	8	+	77557668-77557674:77557675-77557717	8qC1	Mus musculus target of myb1 homolog (chicken) (Tom1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]			
Mus musculus	RefSeq	ILMN_215586	ILMN_215586	PPM1A	NM_008910.2	NM_008910.2		19042	31560649	NM_008910.2	Ppm1a	NP_032936.1	ILMN_1257193	006620598	S	741	CCAGTTCATCATCCTTGCATGCGATGGCATCTGGGACGTCATGGGGAACG	12	+	73885409-73885458	12qC3	Mus musculus protein phosphatase 1A, magnesium dependent, alpha isoform (Ppm1a), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MPPa-1; AU017636; AI427932; 2310003C21Rik; 2900017D14Rik; MMPa-2	MPPa-1; AU017636; AI427932; 2310003C21Rik; 2900017D14Rik; MMPa-2
Mus musculus	RefSeq	ILMN_215586	ILMN_215586	PPM1A	NM_008910.2	NM_008910.2		19042	31560649	NM_008910.2	Ppm1a	NP_032936.1	ILMN_2732308	006560685	S	1677	ACCCAGGCTCATGGAAACTGTCTCTGTTCCGGCGAGGACTGGCTCACTGA	12	+	73895235-73895284	12qC3	Mus musculus protein phosphatase 1A, magnesium dependent, alpha isoform (Ppm1a), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MPPa-1; AU017636; AI427932; 2310003C21Rik; 2900017D14Rik; MMPa-2	MPPa-1; AU017636; AI427932; 2310003C21Rik; 2900017D14Rik; MMPa-2
Mus musculus	RefSeq	ILMN_215586	ILMN_215586	PPM1A	NM_008910.2	NM_008910.2		19042	31560649	NM_008910.2	Ppm1a	NP_032936.1	ILMN_2732309	000540554	S	1677	CCCAGGCTCATGGAAACTGTCTCTGTTCCGGCGAGGACTGGCTCACTGAT	12	+	73895235-73895284	12qC3	Mus musculus protein phosphatase 1A, magnesium dependent, alpha isoform (Ppm1a), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MPPa-1; AU017636; AI427932; 2310003C21Rik; 2900017D14Rik; MMPa-2	MPPa-1; AU017636; AI427932; 2310003C21Rik; 2900017D14Rik; MMPa-2
Mus musculus	RefSeq	ILMN_218128	ILMN_247046	AFG3L2	NM_027130.1	NM_027130.1		69597	110625760	NM_027130.1	Afg3l2	NP_081406.1	ILMN_2691982	003710440	S	2641	GGGATGGCCTCCATTGCAGCTGAGGGCTTCACAACTGCAGCAACTGCCAG	18	-	67564785-67564834	18qE1	Mus musculus AFG3(ATPase family gene 3)-like 2 (yeast) (Afg3l2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism [goid 16265] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; The process whose specific outcome is the progression of the muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48747] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	AW260507; 2310036I02Rik	AW260507; 2310036I02Rik
Mus musculus	RefSeq	ILMN_212289	ILMN_241081	EIF2A	NM_001005509.1	NM_001005509.1		229317	54020675	NM_001005509.1	Eif2a	NP_001005509.1	ILMN_2624782	001050010	S	1842	AAGCCCATGGTGTTCATGGAATTGCCATATGCCCACTGTTAACATCAGTC	3	+	58361161-58361210	3qD	Mus musculus eukaryotic translation initiation factor 2a (Eif2a), mRNA.		Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	D030048D22; D3Ertd194e; MGC105246	D030048D22; D3Ertd194e; MGC105246
Mus musculus	RefSeq	ILMN_189116	ILMN_232666	OLIG2	NM_016967.2	NM_016967.2		50913	59858556	NM_016967.2	Olig2	NP_058663.2	ILMN_2724709	004250463	S	902	TGTCCTCGGTCGGATCCATCCGGCCTCCGCACGGCCTGCTCAAGTCACCG	16	+	91227387-91227436	16qC3.3	Mus musculus oligodendrocyte transcription factor 2 (Olig2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]	The process whereby a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system [goid 48709] [evidence IMP]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of oligodendrocytes. Oligodendrocytes are non-neuronal cells. The primary function of oligodendrocytes is the myelination of nerve axons in the central nervous system. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21529] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into an oligodendrocyte in an environment that is neutral with respect to the developmental pathway [goid 21530] [evidence IDA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]	Olg-2; Bhlhb1; AI604895; RK17; Oligo2	Olg-2; Bhlhb1; AI604895; RK17; Oligo2
Mus musculus	RefSeq	ILMN_188429	ILMN_230884	EOMES	NM_010136.2	NM_010136.2		13813	83921571	NM_010136.2	Eomes	NP_034266.2	ILMN_1251446	007650615	S	2642	GGAGGACGCAGGAGTGTTTTTAAAACTGAAAAGGTCGTTCAAGGTGCTGG	9	+	118394332-118394381	9qF3	Mus musculus eomesodermin homolog (Xenopus laevis) (Eomes), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	C77258; Tbr2	C77258; Tbr2
Mus musculus	RefSeq	ILMN_222868	ILMN_222868	IL22	NM_016971.1	NM_016971.1		50929	8393604	NM_016971.1	Il22	NP_058667.1	ILMN_2755950	006660088	S	850	GTACTTTAAAAAATTGTTTGAAAGGAGGTTACCTCTCATTCCTTTAGAAA	10	+	117646839-117646888	10qD2	Mus musculus interleukin 22 (Il22), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IDA]; Any process that modulates the frequency, rate or extent of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42516] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	IL-22; IL-TIF; Iltif	IL-22; IL-TIF; Iltif
Mus musculus	RefSeq	ILMN_209258	ILMN_209258	SOST	NM_024449.4	NM_024449.4		74499	141803308	NM_024449.4	Sost	NP_077769.2	ILMN_1253415	006110440	S	1455	TCTACACAACAGTTTAAGGTCGTTGGAGGAAACTGGGCTTGCCAGTCACC	11	-	101824333-101824382	11qD	Mus musculus sclerostin (Sost), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence ISA]		5430411E23Rik	5430411E23Rik
Mus musculus	RefSeq	ILMN_223218	ILMN_256706	BDNF	NM_001048142.1	NM_001048142.1		12064	114326458	NM_001048142.1	Bdnf	NP_001041607.1	ILMN_1255582	003400497	S	104	CTGGCTGGCTGTCGCACGGTTCCCAGTGCGCCCGGGACTCCCGGGCTTGG	2	+	109533823-109533872	2qE3	Mus musculus brain derived neurotrophic factor (Bdnf), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IPI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IDA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IDA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217462	ILMN_241553	C730025P13RIK	NM_177344.3	NM_177344.3		227615	124001544	NM_177344.3	C730025P13Rik	NP_796318.2	ILMN_2773862	000290048	S	759	GCCCAGTTTACTGTCCAGTTTTCTTTATATATAAGATCGTTTCCTCGAGC	2	+	25111717-25111766	2qA3	Mus musculus RIKEN cDNA C730025P13 gene (C730025P13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-132N23.14	RP23-132N23.14
Mus musculus	Riken	ILMN_204800	ILMN_204800	6430573H23RIK	ri|6430573H23|PX00047P19|AK032505|2606					AK032505	6430573H23Rik		ILMN_1234955	004230484	S	2533	GCCTGGGCACTACAATGAGTTACAGGCCAGTCTTGGCTATAGAATAGGGC										
Mus musculus	MEEBO	ILMN_185395	ILMN_185395	MT-CO2	scl0017709.1_35						mt-Co2		ILMN_2426691	006840564	S	19	AACGACCTAAAACCTGGTGAACTACGACTGCTAGAAGTTGATAACCGAGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184913	ILMN_312052	SBF2	XM_001477215.1	XM_001477215.1		319934	149257940	XM_001477215.1	Sbf2	XP_001477265.1	ILMN_2422631	005560368	S	7038	TACCAAACTAATATTTCAAAATATGTATATATGATTTCTATATCCTGATT				7qF1	PREDICTED: Mus musculus SET binding factor 2 (Sbf2), mRNA.	The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IDA]	The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence IPI]	Interacting selectively with any phosphatase [goid 19902] [evidence IPI]; Modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19208] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]		
Mus musculus	RefSeq	ILMN_205585	ILMN_312052	SBF2	XM_001477215.1	XM_001477215.1		319934	149257940	XM_001477215.1	Sbf2	XP_001477265.1	ILMN_1245253	005220382	S	3411	CCAGCAGAGCGTGCAGGAAGGGTTGCAGATCACATCAGCGTCTTTCCAGT				7qF1	PREDICTED: Mus musculus SET binding factor 2 (Sbf2), mRNA.	The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IDA]	The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence IPI]	Interacting selectively with any phosphatase [goid 19902] [evidence IPI]; Modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19208] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]		
Mus musculus	Riken	ILMN_206659	ILMN_206659	B3GAT3	ri|A430034G17|PX00134B10|AK079723|2958					AK079723	B3Gat3		ILMN_1234775	001940243	S	2663	ATTCTGCTTCCTGAATGCTGGGACTAAAGGAGTGTGCCACCATGACCAGC										
Mus musculus	RefSeq	ILMN_217300	ILMN_248835	CTSA	NM_001038492.1	NM_001038492.1		19025	84042522	NM_001038492.1	Ctsa	NP_001033581.1	ILMN_2681631	001580673	S	3054	TGTGGGAGAGAAATACACCGTGAAACCTGGGAACACCCTTTCCTTGGGCC	2	+	164666039-164666088	2qH3	Mus musculus cathepsin A (Ctsa), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PPCA; Ppgb; AU019505	PPCA; Ppgb; AU019505
Mus musculus	RefSeq	ILMN_208776	ILMN_248835	CTSA	NM_001038492.1	NM_001038492.1		19025	84042522	NM_001038492.1	Ctsa	NP_001033581.1	ILMN_2669714	000610414	S	2299	TCGAGAAGTGATTGACAAGAACCGTCCTGCAGACGTTGCGGCCTCCCATG	2	+	164665284-164665333	2qH3	Mus musculus cathepsin A (Ctsa), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PPCA; Ppgb; AU019505	PPCA; Ppgb; AU019505
Mus musculus	RefSeq	ILMN_217300	ILMN_248835	CTSA	NM_001038492.1	NM_001038492.1		19025	84042522	NM_001038492.1	Ctsa	NP_001033581.1	ILMN_1213617	000520608	S	528	AAAGAACAGCCCCGTGGTGCTTTGGCTTAACGGGGGTCCCGGCTGCAGCT	2	+	164659844-164659893	2qH3	Mus musculus cathepsin A (Ctsa), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PPCA; Ppgb; AU019505	PPCA; Ppgb; AU019505
Mus musculus	Riken	ILMN_202433	ILMN_202433	PTPN13	ri|4632415F05|PX00012F01|AK014577|4074					AK014577	Ptpn13		ILMN_2549571	001850451	S	3666	AAGACCTTCCCCGACAGTAACCGAAGCAAGGCCAAGCGGCGAGGCATCTC						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_223182	ILMN_223182	MXD4	NM_010753.2	NM_010753.2		17122	31560565	NM_010753.2	Mxd4	NP_034883.2	ILMN_2760417	003890343	S	846	GAAGCCAGCCTCGTCATGGGCCTACTGCTGTGCCATTCTCGAAGCTACAG	5	-	34519512-34519561	5qB2	Mus musculus Max dimerization protein 4 (Mxd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IGI]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mad4; 2810410A03Rik	Mad4; 2810410A03Rik
Mus musculus	RefSeq	ILMN_223182	ILMN_223182	MXD4	NM_010753.2	NM_010753.2		17122	31560565	NM_010753.2	Mxd4	NP_034883.2	ILMN_2839886	001400386	S	238	ACGGCGACTTCGCAAGGAAGAAAACAAAGACGGCCGGCCTGGTGCGCAAG	5	-	34529991-34530040	5qB2	Mus musculus Max dimerization protein 4 (Mxd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IGI]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mad4; 2810410A03Rik	Mad4; 2810410A03Rik
Mus musculus	RefSeq	ILMN_258033	ILMN_258033	GM527	NM_001025605.1	NM_001025605.1		217648	71037370	NM_001025605.1	Gm527	NP_001020776.1	ILMN_3117134	002810762	A	1082	CTGCAGCCTTCCAGATTGACGGACATTGGATGCACTATGATGGCCTCAGA	12	+	66025197-66025246	12qC1	Mus musculus gene model 527, (NCBI) (Gm527), mRNA.				MGC117765	MGC117765
Mus musculus	RefSeq	ILMN_258033	ILMN_258033	GM527	NM_001025605.1	NM_001025605.1		217648	71037370	NM_001025605.1	Gm527	NP_001020776.1	ILMN_3042287	003400541	I	143	CACGCTCGCCGGGGCTGGCCGAGGCAGCCGGAGGAGCTGGTAGATGCGGC	12	+	66019040-66019089	12qC1	Mus musculus gene model 527, (NCBI) (Gm527), mRNA.				MGC117765	MGC117765
Mus musculus	RefSeq	ILMN_201547	ILMN_201547	PIRA4	NM_011091.1	NM_011091.1		18727	21617862	NM_011091.1	Pira4	NP_035221.1	ILMN_2920849	007330114	S	1610	GCAGTCAGGAGAGAACGTGAGCCTGCTGTGTTGGTCAATGGACTCTGTGG	7	-	3497271-3497320		Mus musculus paired-Ig-like receptor A4 (Pira4), mRNA.				6M7	6M7
Mus musculus	RefSeq	ILMN_208830	ILMN_208830	HOXB1	NM_008266.3	NM_008266.3		15407	45598391	NM_008266.3	Hoxb1	NP_032292.2	ILMN_2818750	006220639	S	979	GTAACTGGGCTTCCAACGCTTGACCAGTTCTCTCGAAGACTTTCCCAAAC	11	+	96183245-96183294	11qD	Mus musculus homeo box B1 (Hoxb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process that contributes to the act of creating the structural organization of the facial nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities [goid 21612] [evidence IMP]; The process whose specific outcome is the progression of the facial nucleus over time, from its formation to the mature structure [goid 21754] [evidence IMP]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21570] [evidence IGI]; The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21571] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Hox-2.9; MGC124123	Hox-2.9; MGC124123
Mus musculus	RefSeq	ILMN_189825	ILMN_239536	CCDC71	NM_133744.3	NM_133744.3		72454	141802051	NM_133744.3	Ccdc71	NP_598505.1	ILMN_2590200	005690390	S	2300	TTCCACAGGCTCCATCTTTCTCCGGGGTCCAGCCTCACCATGTCCCCTAA	9	+	108367503-108367552	9qF2	Mus musculus coiled-coil domain containing 71 (Ccdc71), mRNA.				2600016J21Rik	2600016J21Rik
Mus musculus	RefSeq	ILMN_198634	ILMN_318513	EG637913	XR_031546.1	XR_031546.1		637913	149257094	XR_031546.1	EG637913		ILMN_1251777	000670451	S	1941	AAAAGGGGATGTGTCCCTGTCCCGGTGGCATTGCCAGGCTTTGCCATATG				7qB3	PREDICTED: Mus musculus predicted gene, EG637913 (EG637913), misc RNA.					
Mus musculus	RefSeq	ILMN_222357	ILMN_222357	TAF7	NM_175770.3	NM_175770.3		24074	142348602	NM_175770.3	Taf7	NP_786964.1	ILMN_2748412	006420543	S	2232	GCCCCTAGGCAAACTAAGTATGAATTCAGAATGGAAGTCATCTGGCCCCT	18	-	37801127-37801176	18qB3	Mus musculus TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence IDA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]	Taf2f; BB007175; TAFII55; AI607308; 55kDa	Taf2f; BB007175; TAFII55; AI607308; 55kDa
Mus musculus	RefSeq	ILMN_190694	ILMN_190694	TRAF4	NM_009423.3	NM_009423.3		22032	141803144	NM_009423.3	Traf4	NP_033449.2	ILMN_1219701	001470632	S	3932	GGTGAATGGGCTATTGCCACCACCAAAGAAACTACCCCTTTTCTAAGTGA	11	-	77970936-77970985	11qB5	Mus musculus Tnf receptor associated factor 4 (Traf4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract [goid 30323] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A530032M13Rik; CART1	A530032M13Rik; CART1
Mus musculus	RefSeq	ILMN_190694	ILMN_190694	TRAF4	NM_009423.3	NM_009423.3		22032	141803144	NM_009423.3	Traf4	NP_033449.2	ILMN_2472444	002350445	S	1433	ACTACGTGCGGGATGATGCGGTTTTCATCCGTGCCTCTGTCGAACTGCCC	11	-	77973435-77973484	11qB5	Mus musculus Tnf receptor associated factor 4 (Traf4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract [goid 30323] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A530032M13Rik; CART1	A530032M13Rik; CART1
Mus musculus	MEEBO	ILMN_215237	ILMN_215237	MYO3B	scl20817.6.1_144	XM_194023.1			25047868	XM_194023.1	Myo3b		ILMN_1216519	007510440	S	1126	GGCTACAGGTATTTAGCACAGGCATCTTTCCCACCCTGGAGCAATTGTTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194229	ILMN_194229	APOA4	scl011808.3_227				6680701	NM_007468	Apoa4		ILMN_2754104	007610673	S	820	AGAGCAAGGTGAAGGGCAACACGGAAGGGCTGCAGAAGGCTCTGGAAGAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process of the innate immune response that takes place in the mucosal tissues [goid 2227] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; Any process that modulates the frequency, rate or extent of absorption of cholesterol into the blood, and the exclusion of other sterols from absorption [goid 30300] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]		
Mus musculus	Riken	ILMN_201929	ILMN_201929	5430419D17RIK	ri|5430419D17|PX00022K14|AK017319|1045					AK017319	5430419D17Rik		ILMN_2545709	006330753	S	967	ACTCTACACTAGAACACAGGACCACTGCAAACCCCAACAGTCACAACCTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221261	ILMN_232513	1700023D19RIK	XM_917226.2	XM_917226.2		75510	94380271	XM_917226.2	1700023D19Rik	XP_922319.1	ILMN_2733128	006520286	S	554	GGCAAAACCGGAAACTCCTGCTGAAGTAGGCCAGAGACTTTGGTGTTTGT				7qB4	PREDICTED: Mus musculus RIKEN cDNA 1700023D19 gene, transcript variant 4 (1700023D19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210737	ILMN_227205	LOC639777	XM_916364.2	XM_916364.2		639777	94372111	XM_916364.2	LOC639777	XP_921457.1	ILMN_1221964	003930458	S	1054	CAGAAGACCAGCAGACAATGACATTCTATAATAAAAATACCTTGATGGCC					PREDICTED: Mus musculus similar to novel immunoglobulin domain containing protein (LOC639777), mRNA.					
Mus musculus	RefSeq	ILMN_192753	ILMN_253170	NUP214	NM_172268.2	NM_172268.2		227720	124378032	NM_172268.2	Nup214	NP_758472.2	ILMN_1240083	006940477	S	6280	AGTGGATTCGCTGGGTTTGGATCGGGCACAGGAGCCTTCACCTTTGGATC	2	+	31906635-31906668:31907294-31907309	2qB	Mus musculus nucleoporin 214 (Nup214), mRNA. XM_989938 XM_989973 XM_990012 XM_990051 XM_990078 XM_990101 XM_990130 XM_990157	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence ISO]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IMP]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [evidence IMP]	Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence IMP]	MGC37347; D2H9S46E; RP23-55I14.4; BC039282; CAN	MGC37347; D2H9S46E; RP23-55I14.4; BC039282; CAN
Mus musculus	RefSeq	ILMN_192753	ILMN_253170	NUP214	NM_172268.2	NM_172268.2		227720	124378032	NM_172268.2	Nup214	NP_758472.2	ILMN_2490990	005720435	S	8084	GGGAACATTCATGGATGAGGACTATAACTGGGTAAAGAGAGGGAAGAGCC	2	+	31909384-31909433	2qB	Mus musculus nucleoporin 214 (Nup214), mRNA. XM_989938 XM_989973 XM_990012 XM_990051 XM_990078 XM_990101 XM_990130 XM_990157	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence ISO]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IMP]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [evidence IMP]	Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence IMP]	MGC37347; D2H9S46E; RP23-55I14.4; BC039282; CAN	MGC37347; D2H9S46E; RP23-55I14.4; BC039282; CAN
Mus musculus	RefSeq	ILMN_217504	ILMN_217504	NKX2-6	NM_010920.1	NM_010920.1		18092	33859581	NM_010920.1	Nkx2-6	NP_035050.1	ILMN_2684022	002450390	S	788	GAAGACCTTGAGAACATTCTTTCCCTCGGAAGTGTAACCACGTAGCCACG	14	+	69793446-69793495	14qD2	Mus musculus NK2 transcription factor related, locus 6 (Drosophila) (Nkx2-6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nkx2.6; Nkx-2.6; AV044928; Tix; tinman	Nkx2.6; Nkx-2.6; AV044928; Tix; tinman
Mus musculus	RefSeq	ILMN_213117	ILMN_213117	OLFR1170	NM_146532.1	NM_146532.1		258525	33239199	NM_146532.1	Olfr1170	NP_666743.1	ILMN_2633839	001780195	S	607	GTCATTTCTATATTTAGTGAATCTTCTAGTGTCCTGATCACTTTAGCCTC	2	-	88064531-88064580	2qD	Mus musculus olfactory receptor 1170 (Olfr1170), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR174-12; MGC157568	MOR174-12; MGC157568
Mus musculus	RefSeq	ILMN_221924	ILMN_221924	SLC35E4	NM_153142.3	NM_153142.3		103710	142375518	NM_153142.3	Slc35e4	NP_694782.1	ILMN_1225229	004830575	S	2268	TGTCCGTGGTCTACAACCTGGCCAGCTTCTCCTTGCTGGCCCTCACATCT	11	-	3807766-3807815	11qA1	Mus musculus solute carrier family 35, member E4 (Slc35e4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI414849; AI536442; RP23-128G5.5; MGC28785; A330108F03Rik	AI414849; AI536442; RP23-128G5.5; MGC28785; A330108F03Rik
Mus musculus	RefSeq	ILMN_212413	ILMN_244512	PHPT1	NM_029293.2	NM_029293.2		75454	118130568	NM_029293.2	Phpt1	NP_083569.1	ILMN_2626143	005360392	S	356	CAAAGCCAAGTATCCTGACTATGAGGTCACCTGGGCTGACGATGGCTACT	2	-	25429128-25429177	2qA3	Mus musculus phosphohistidine phosphatase 1 (Phpt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]	1700008C22Rik; Php14	1700008C22Rik; Php14
Mus musculus	RefSeq	ILMN_212742	ILMN_212742	SHC1	NM_011368.4	NM_011368.4		20416	141802610	NM_011368.4	Shc1	NP_035498.2	ILMN_1236765	000110450	S	297	TCTTACAGTCAATGCGAGCCCTTGACTTCAATACCCGGACTCAGGTCACC	3	+	89226880-89226918:89227430-89227440	3qF1	Mus musculus src homology 2 domain-containing transforming protein C1 (Shc1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p66; ShcA; Shc	p66; ShcA; Shc
Mus musculus	RefSeq	ILMN_212742	ILMN_212742	SHC1	NM_011368.4	NM_011368.4		20416	141802610	NM_011368.4	Shc1	NP_035498.2	ILMN_2637676	005720730	S	2711	TTTGAGCACAGAATTATGATAATCAATTACATTTATACATCACCTCGATG	3	+	89233569-89233618	3qF1	Mus musculus src homology 2 domain-containing transforming protein C1 (Shc1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p66; ShcA; Shc	p66; ShcA; Shc
Mus musculus	RefSeq	ILMN_212742	ILMN_212742	SHC1	NM_011368.4	NM_011368.4		20416	141802610	NM_011368.4	Shc1	NP_035498.2	ILMN_2716426	006510047	S	549	ACATGCAATCTATCTCTTTCGCGTCCGGTGGGGATCCGGACACAGCTGAG	3	+	89228141-89228165:89228477-89228501	3qF1	Mus musculus src homology 2 domain-containing transforming protein C1 (Shc1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p66; ShcA; Shc	p66; ShcA; Shc
Mus musculus	RefSeq	ILMN_212764	ILMN_212764	MKRN1	NM_018810.2	NM_018810.2		54484	148229621	NM_018810.2	Mkrn1	NP_061280.2	ILMN_2630018	001230403	S	2655	TGTCGGTTTGCAGAAGTAATGAACCCTTCCCCACCGAAGAAAAGGGAGGG				6qB1	Mus musculus makorin, ring finger protein, 1 (Mkrn1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	RFP	RFP
Mus musculus	RefSeq	ILMN_188235	ILMN_227266	SYPL	NM_013635.2	NM_013635.2		19027	26251301	NM_013635.2	Sypl	NP_038663.1	ILMN_2758720	002060669	S	1406	GCACTTGTGCTGCATGGGTATATCCATTATTTCTGGTGGTTTCTTAGGCT	12	+	33661209-33661258	12qA3	Mus musculus synaptophysin-like protein (Sypl), transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AI314763; Pphn; Pan I; AI604763; D12Ertd446e	AI314763; Pphn; Pan I; AI604763; D12Ertd446e
Mus musculus	RefSeq	ILMN_200083	ILMN_200083	LOC381647	XM_358635.1	XM_358635.1			38080274	XM_358635.1	LOC381647		ILMN_1212860	007550373	S	320	CTGTCATACCTGCTGAATAAGGCTTGGTTTCCCAGACCAGCAACCCTGGG										
Mus musculus	RefSeq	ILMN_210752	ILMN_210752	NEK3	NM_011848.2	NM_011848.2		23954	141803476	NM_011848.2	Nek3	NP_035978.1	ILMN_2608789	006020475	S	1303	CCCTGAGGCCTTGCTGTCAATGCTGAAGGACGCTGATCTCAGTCAGGCAT	8	-	23241704-23241753	8qA2	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 3 (Nek3), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210752	ILMN_210752	NEK3	NM_011848.2	NM_011848.2		23954	141803476	NM_011848.2	Nek3	NP_035978.1	ILMN_1252297	004540523	S	1908	GGCAACAGTTACAGCTGTCCAGTGCCTGTTATCCCCAATTACCATGTAAC	8	-	23238808-23238857	8qA2	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 3 (Nek3), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185619	ILMN_258196	LOC677248	XM_001001712.1	XM_001001712.1		677248	94380195	XM_001001712.1	LOC677248	XP_001001712.1	ILMN_1259959	004290743	S	1569	GCACCATAAATCAGCCAAACATTTAACAGAAGATGTCGTGAACACCGGAG					PREDICTED: Mus musculus similar to crooked legs CG14938-PB (LOC677248), mRNA.					
Mus musculus	Riken	ILMN_201654	ILMN_201654	FTSJ	ri|1110063E01|R000019C05|AK004357|1048					AK004357	Ftsj		ILMN_1214133	005220376	S	799	ACCCTCATGTGTGCGAGGCAAGTCTTCTGCTGCTAAGGTTTACCCCCGCC										
Mus musculus	RefSeq	ILMN_211636	ILMN_211636	TBC1D13	NM_146252.2	NM_146252.2		70296	142368502	NM_146252.2	Tbc1d13	NP_666364.1	ILMN_1218901	005340110	S	3225	GCATCTGATTTGTTTCTGTGGGAGACCTGCATCCTGTGCCCACCACTTGG	2	+	30001501-30001550	2qB	Mus musculus TBC1 domain family, member 13 (Tbc1d13), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BC025586; 2600014A06Rik; MGC38260	BC025586; 2600014A06Rik; MGC38260
Mus musculus	RefSeq	ILMN_221485	ILMN_221485	ATP6V1H	NM_133826.2	NM_133826.2		108664	31981587	NM_133826.2	Atp6v1h	NP_598587.2	ILMN_2812935	005220139	S	1602	GTTCAGCCTTTTTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGTC	1	+	5152256-5152305	1qA1	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit H (Atp6v1h), mRNA.	Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence IEA]; The V1 domain of a proton-transporting V-type ATPase found in the vacuolar membrane [goid 221] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Functions to increase the rate of ATP hydrolysis [goid 1671] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	AU022349; SFDbeta; CGI-11; VMA13; SFDalpha; 0710001F19Rik; SFD; MGC11985	AU022349; SFDbeta; CGI-11; VMA13; SFDalpha; 0710001F19Rik; SFD; MGC11985
Mus musculus	RefSeq	ILMN_209638	ILMN_209638	KLF11	NM_178357.2	NM_178357.2		194655	142364258	NM_178357.2	Klf11	NP_848134.1	ILMN_1244957	005690048	S	3767	GAAAGACTAAGTTGGAAAACAGTTCCTATCTGAAAAGGACCCCTGAGCCC	12	+	25344060-25344109	12qA1.3	Mus musculus Kruppel-like factor 11 (Klf11), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	Tieg2b; D12Ertd427e; 9830142A17; Tieg3; Tieg2	Tieg2b; D12Ertd427e; 9830142A17; Tieg3; Tieg2
Mus musculus	MEEBO	ILMN_220544	ILMN_220544	ARHGAP8	scl0002470.1_9				19484232	BC024991	Arhgap8		ILMN_2723509	000450364	S	16	AGGTCACAGGCAGACAGGCCAAGGGTACCCCTTCCCTCGCCCACCCTGCA						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215444	ILMN_215444	RAC1	NM_009007.2	NM_009007.2		19353	117676397	NM_009007.2	Rac1	NP_033033.1	ILMN_2659616	005560246	S	1637	CCTCCACTGCCGTCCCTCCCCAGATGGGGCGTTGAGTCCATATTTAAACT	5	-	144266931-144266980	5qG2	Mus musculus RAS-related C3 botulinum substrate 1 (Rac1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence TAS]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell [goid 6972] [evidence IDA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IMP]; The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain [goid 21799] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The directed movement of individual interneuron precursors during the embryonic development of the olfactory bulb [goid 21831] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D5Ertd559e; AL023026	D5Ertd559e; AL023026
Mus musculus	RefSeq	ILMN_231232	ILMN_231232	3110004L20RIK	NM_001033167.1	NM_001033167.1		73102	85701677	NM_001033167.1	3110004L20Rik	NP_001028339.1	ILMN_3064514	001260468	I	667	GCTACCAGAAGACCCTGGTGGTGCTCACCTGGATCCCGGCACTGTTCATT	13	-	34351931-34351980	13qA3.3	Mus musculus RIKEN cDNA 3110004L20 gene (3110004L20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_231232	ILMN_231232	3110004L20RIK	NM_001033167.1	NM_001033167.1		73102	85701677	NM_001033167.1	3110004L20Rik	NP_001028339.1	ILMN_3142391	003990484	A	5875	CCCACGTCACTACTTTCAAGGCTTCTTCTGTGAGCGGCCTTCATTCGCCC	13	-	34186949-34186998	13qA3.3	Mus musculus RIKEN cDNA 3110004L20 gene (3110004L20Rik), mRNA.					
Mus musculus	MEEBO	ILMN_216208	ILMN_216208	EMILIN1	scl27971.8.1_8	NM_133918.1			19527129	NM_133918.1	Emilin1		ILMN_2668462	005960053	S	2925	CGGGAGGCTATGAACCCGAGGGACTGGAGAATAAGCCTGTGGCCGAAAGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; A component of the extracellular matrix that enables the matrix to recoil after transient stretching [goid 30023] [evidence IMP]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197909	ILMN_253047	GNAT3	NM_001081143.1	NM_001081143.1		242851	124487258	NM_001081143.1	Gnat3	NP_001074612.1	ILMN_1258192	007510600	S	780	GCGCAGCGCTAAGTGCCTATGACATGGTGCTTGTAGAAGATGAGGAGGTG	5	+	17521130-17521179	5qA3	Mus musculus guanine nucleotide binding protein, alpha transducing 3 (Gnat3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IPI]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required to receive a bitter taste stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50913] [evidence IMP]; The series of events required to receive a sweet taste stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50916] [evidence IMP]; The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates [goid 50917] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IDA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IPI]	Gtn; Ggust	Gtn; Ggust
Mus musculus	RefSeq	ILMN_253047	ILMN_253047	GNAT3	NM_001081143.1	NM_001081143.1		242851	124487258	NM_001081143.1	Gnat3	NP_001074612.1	ILMN_3026658	003850687	I	336	ACACATTGCAGTCCATCCTAGCTATTGTGAAAGCCATGGCTACACTGGGG	5	+	17497202-17497251	5qA3	Mus musculus guanine nucleotide binding protein, alpha transducing 3 (Gnat3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IPI]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required to receive a bitter taste stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50913] [evidence IMP]; The series of events required to receive a sweet taste stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50916] [evidence IMP]; The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates [goid 50917] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IDA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IPI]	Gtn; Ggust	Gtn; Ggust
Mus musculus	RefSeq	ILMN_216761	ILMN_216761	SLC9A7	NM_177353.3	NM_177353.3		236727	118130399	NM_177353.3	Slc9a7	NP_796327.1	ILMN_2675033	007610746	S	2275	CCTGAGGGATCAGGGAGGCTCTTATAAGGGTGAGGATGGCCAAATGCCCA	X	-	19683025-19683074	XqA1.3	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 7 (Slc9a7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]	NHE7; A530087D17Rik	NHE7; A530087D17Rik
Mus musculus	MEEBO	ILMN_191479	ILMN_191479	ZFP251	scl47027.4_266				51829784	XM_147946	Zfp251		ILMN_2479432	004890431	S	6	CTGTGTACCCCAGAGTCAGTGCGGACACTGGGAGGTTCCTGATGGTGTTA								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223169	ILMN_223169	TACC3	scl021335.14_1	NM_011524.1			6755709	NM_011524.1	Tacc3		ILMN_1229322	000870427	S	1441	TGGGGAATGCATAGTGAAAATTGAAAAAGAAGGCCAGAGGTACCAGGCGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles [goid 30953] [evidence IDA]; The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle [goid 22027] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton [goid 32886] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 42994] [evidence IDA]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]		
Mus musculus	RefSeq	ILMN_221995	ILMN_221995	IL23R	NM_144548.1	NM_144548.1		209590	21362352	NM_144548.1	Il23r	NP_653131.1	ILMN_1244322	000130164	S	2414	GTACAGCTCAGTTTGTACAAAGGATAAATCGTGCAGAATGCATAGTAGTG	6	-	67372950-67372999	6qC1	Mus musculus interleukin 23 receptor (Il23r), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISO]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence ISO]; Any process involved in the carrying out of an immune response by a leukocyte [goid 2443] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with interleukin-23 [goid 42019] [evidence ISO]; Combining with interleukin-23 to initiate a change in cell activity [goid 42020] [evidence ISO]	IL-23R	IL-23R
Mus musculus	RefSeq	ILMN_215075	ILMN_215075	OLFR146	NM_146747.1	NM_146747.1		258742	33239231	NM_146747.1	Olfr146	NP_666958.1	ILMN_2655240	002970202	S	584	ATGATCTCGTAATTCTAATTTTTAGTCTAATTAATACCATTTTCCCAACC	9	-	38826491-38826540	9qA5.1	Mus musculus olfactory receptor 146 (Olfr146), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-10; M15	MOR171-10; M15
Mus musculus	RefSeq	ILMN_219501	ILMN_219501	FBXO46	NM_175530.2	NM_175530.2		243867	31342111	NM_175530.2	Fbxo46	NP_780739.1	ILMN_2886468	004150170	S	2651	CAGGCCAGTGGGTCTGAATTTCGCCAGGATTCTTCTTCCACTTTGGGGTC	7	+	19723310-19723359	7qA3	Mus musculus F-box protein 46 (Fbxo46), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		20D7-FC4; 4932704E22Rik; Fbxo34l	20D7-FC4; 4932704E22Rik; Fbxo34l
Mus musculus	RefSeq	ILMN_198551	ILMN_327605	GM595	NM_001085499.1	NM_001085499.1		209005	148225759	NM_001085499.1	Gm595	NP_001078968.1	ILMN_1214389	004280376	S	1760	CTCAGACCAGAGATCATCTCAAGAATCTCTAGAAACCAGACGATCAAGCC				XqA4	Mus musculus gene model 595, (NCBI) (Gm595), mRNA.				RP23-114B24.1	RP23-114B24.1
Mus musculus	RefSeq	ILMN_221148	ILMN_243726	ESPN	NM_207691.2	NM_207691.2		56226	111494242	NM_207691.2	Espn	NP_997574.2	ILMN_2731578	007650471	S	1521	AACAGTCGGAGAAGCTGCGGACACTAGGCTACGACGAAGCCAAGCTCGCG	4	-	151495277-151495326	4qE2	Mus musculus espin (Espn), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence TAS]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence ISO]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Assembly of actin filament bundles in which the filaments are tightly packed (approximately 10-20 nm apart) and oriented with the same polarity [goid 30046] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; The assembly of a network of actin filaments; actin filaments on different axes and with differing orientations are crosslinked together to form a mesh of filaments [goid 51639] [evidence NAS]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	je	je
Mus musculus	MEEBO	ILMN_220914	ILMN_220914	PSMC4	scl000239.1_11	XM_355872.1			38086177	XM_355872.1	Psmc4		ILMN_2728516	005570228	S	205	TCCTGGAAGTGCAGGAGGAGTATATCAAGGACGAGCAGAAGAACCTGAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	MEEBO	ILMN_196247	ILMN_196247	SCL0003425.1_488	scl0003425.1_488						scl0003425.1_488		ILMN_2522952	003930048	S	20	CAATGTTTTTAAGTCTCTCATCTCATGGACACTGGTGTTGTTTTTGCCTG										
Mus musculus	RefSeq	ILMN_229200	ILMN_229200	OLFR1465	NM_001011841.1	NM_001011841.1		258121	58801441	NM_001011841.1	Olfr1465	NP_001011841.1	ILMN_3160503	000510195	S	675	AATGCACTCAGATGCTGGATATGGAAAGGCTGTATCCACTTGTGCCGCAC	19	-	13388049-13388098	19qA	Mus musculus olfactory receptor 1465 (Olfr1465), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-28	MOR202-28
Mus musculus	RefSeq	ILMN_216606	ILMN_216606	C6	NM_016704.1	NM_016704.1		12274	7709995	NM_016704.1	C6	NP_057913.1	ILMN_2798129	006220553	S	2648	GGAGGATCAAGGCTCTGGAGATAAGATGCAAAGTGCCTGCTGCTTGGCGC	15	+	4753854-4753903	15qA1	Mus musculus complement component 6 (C6), mRNA.				AW111623	AW111623
Mus musculus	RefSeq	ILMN_216606	ILMN_216606	C6	NM_016704.1	NM_016704.1		12274	7709995	NM_016704.1	C6	NP_057913.1	ILMN_1216720	005690711	S	2257	CAGGATGTCCTGACCATCTCCCCATTTCAGAGAGTGTATCAGATTGGGGA	15	+	4748281-4748330	15qA1	Mus musculus complement component 6 (C6), mRNA.				AW111623	AW111623
Mus musculus	RefSeq	ILMN_216056	ILMN_216056	OLFR992	NM_146865.1	NM_146865.1		258865	22129146	NM_146865.1	Olfr992	NP_667076.1	ILMN_2936691	003610138	S	691	GCTTCAGGAAGGAGAAAAGCTTTCTCCACGTGTGCATCCCATATGACCGC	2	-	85239948-85239997	2qD	Mus musculus olfactory receptor 992 (Olfr992), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR203-1	MOR203-1
Mus musculus	RefSeq	ILMN_251929	ILMN_251929	UBE2F	NM_026454.2	NM_026454.2		67921	31982648	NM_026454.2	Ube2f	NP_080730.1	ILMN_2835443	002060722	S	1408	CTCTTAGCTTCTTCCACGAATGTTGACCCTACCTAGATGTGAAGCTTCCC	1	+	93182365-93182414	1qD	Mus musculus ubiquitin-conjugating enzyme E2F (putative) (Ube2f), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	2510010F15Rik; AI851109	2510010F15Rik; AI851109
Mus musculus	RefSeq	ILMN_198046	ILMN_198046	LOC279899	XM_207052.2	XM_207052.2			38080949	XM_207052.2	LOC279899		ILMN_1229004	006510538	S	2896	CCGGAGGATCCTGCAATACCTCTCCTAGGCATATATCCAGAAGATATTCC										
Mus musculus	RefSeq	ILMN_213192	ILMN_312695	LOC100047369	XR_033486.1	XR_033486.1		100047369	149259282	XR_033486.1	LOC100047369		ILMN_1215157	005670494	S	817	TGAAGCTGGTGTGCATTATTCAGAAGTGGCAGTAGGACCTGGGGATGGAC					PREDICTED: Mus musculus similar to 0610007P22Rik protein (LOC100047369), misc RNA.					
Mus musculus	RefSeq	ILMN_213192	ILMN_312695	LOC100047369	XR_033486.1	XR_033486.1		100047369	149259282	XR_033486.1	LOC100047369		ILMN_1216623	002810709	S	816	TTGAAGCTGGTGTGCATTATTCAGAAGTGGCAGTAGGACCTGGGGATGGA					PREDICTED: Mus musculus similar to 0610007P22Rik protein (LOC100047369), misc RNA.					
Mus musculus	RefSeq	ILMN_245623	ILMN_245623	TTC5	NM_001080949.1	NM_001080949.1		219022	124358947	NM_001080949.1	Ttc5	NP_001074418.1	ILMN_3083981	000540553	A	334	CTGGTGGAAGCCTGGAACCAGCTGGGTGAGGTGTACTGGAAGAAAGGAGA	14	-	51397474-51397523	14qC1	Mus musculus tetratricopeptide repeat domain 5 (Ttc5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW743060; MGC38092; 5930437N14	AW743060; MGC38092; 5930437N14
Mus musculus	RefSeq	ILMN_245623	ILMN_245623	TTC5	NM_001080949.1	NM_001080949.1		219022	124358947	NM_001080949.1	Ttc5	NP_001074418.1	ILMN_3013144	002450022	I	1490	GGGACCCTTGTTTATTCTTCCTGCCTCTTCAAAGGTGCCGACTTAAAGAG	14	-	51385391-51385440	14qC1	Mus musculus tetratricopeptide repeat domain 5 (Ttc5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW743060; MGC38092; 5930437N14	AW743060; MGC38092; 5930437N14
Mus musculus	RefSeq	ILMN_201507	ILMN_245623	TTC5	NM_001080949.1	NM_001080949.1		219022	124358947	NM_001080949.1	Ttc5	NP_001074418.1	ILMN_2542550	004900497	S	1126	GCAGTGATGGTGTATAATGTGGTGCAGAGCTGGGGAGTGCTCATCGGGGA	14	-	51386875-51386924	14qC1	Mus musculus tetratricopeptide repeat domain 5 (Ttc5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW743060; MGC38092; 5930437N14	AW743060; MGC38092; 5930437N14
Mus musculus	RefSeq	ILMN_226676	ILMN_226676	HS6ST1	NM_015818.1	NM_015818.1		50785	7657187	NM_015818.1	Hs6st1	NP_056633.1	ILMN_3079255	005290259	I	401	CCGACGACCTGGATCTCTTCCCCACGCCGGACCCACATTACGAGAAAAAG	1	+	36125654-36125703	1qB	Mus musculus heparan sulfate 6-O-sulfotransferase 1 (Hs6st1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	6OST1	6OST1
Mus musculus	RefSeq	ILMN_226676	ILMN_226676	HS6ST1	NM_015818.1	NM_015818.1		50785	7657187	NM_015818.1	Hs6st1	NP_056633.1	ILMN_3158500	006350402	A	3457	TCCAAGAGTGGGAGGCAGGGACCACAGAACTGTCCAGCCAACACGTCTGA	1	+	36163038-36163087	1qB	Mus musculus heparan sulfate 6-O-sulfotransferase 1 (Hs6st1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	6OST1	6OST1
Mus musculus	RefSeq	ILMN_229808	ILMN_229808	OLFR1513	NM_001012269.1	NM_001012269.1		258008	59676584	NM_001012269.1	Olfr1513	NP_001012269.1	ILMN_3162384	002230095	S	738	AACCATGGTTACCGTGTACTATGTGCCCTGTGCCTTCACCTACCTGCGAC	14	-	52968932-52968981	14qC2	Mus musculus olfactory receptor 1513 (Olfr1513), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR223-7P; MOR223-10	MOR223-7P; MOR223-10
Mus musculus	Riken	ILMN_206057	ILMN_206057	D330001D04RIK	ri|D330001D04|PX00190C05|AK052150|3291					AK052150	D330001D04Rik		ILMN_1252642	004010594	S	2970	CTGTCTGAAGGAGAGTTAGTGCCTCAGCTATGGATGCTACAGCTTGCAGG										
Mus musculus	RefSeq	ILMN_199727	ILMN_199727	LOC383874	XM_357305.1	XM_357305.1			38076599	XM_357305.1	LOC383874		ILMN_1229808	000110286	S	386	GCCTTACTACATGCAGAGAGTCTAGGGGCGTTAACTACACTGTTCCAACC										
Mus musculus	RefSeq	ILMN_215555	ILMN_215555	PIWIL2	NM_021308.1	NM_021308.1		57746	10946609	NM_021308.1	Piwil2	NP_067283.1	ILMN_1232038	006020187	S	4564	AGCACCCAGAGGTTGGCGAGGAATAAGGGTTAGGGTCCTCAAATACACCC	14	-	70772586-70772635	14qD2	Mus musculus piwi-like homolog 2 (Drosophila) (Piwil2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Progression through prophase of meiosis I; divided into several stages [goid 7128] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Piwil1l; mili	Piwil1l; mili
Mus musculus	RefSeq	ILMN_221774	ILMN_221774	IDH3A	NM_029573.2	NM_029573.2		67834	31560055	NM_029573.2	Idh3a	NP_083849.1	ILMN_2740134	000060066	S	2216	AATGTACCCTGGTCCCAAGGGGATTTCTTAACAACAGATGTCCCTGTCTG	9	+	54452281-54452330	9qA5.3	Mus musculus isocitrate dehydrogenase 3 (NAD+) alpha (Idh3a), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH + H+ [goid 4449] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]	AI316514; AA407078; 1500012E04Rik; 1110003P10Rik	AI316514; AA407078; 1500012E04Rik; 1110003P10Rik
Mus musculus	RefSeq	ILMN_247015	ILMN_247015	DEFB25	NM_001039122.1	NM_001039122.1		654459	84993773	NM_001039122.1	Defb25	NP_001034211.1	ILMN_3160561	006840707	S	29	GGCAAAGTGGATTCTGCTCATTGTGGCTCTCCTGGTCCTGAGTCATGTAC	2	-	152448711-152448760	2qH1	Mus musculus defensin beta 25 (Defb25), mRNA.				Defb25	Defb25
Mus musculus	RefSeq	ILMN_192974	ILMN_246247	ASB3	NM_023906.3	NM_023906.3		65257	114205425	NM_023906.3	Asb3	NP_076395.2	ILMN_2663555	002490370	S	191	TTTTACAGAGGCTTACTCAGACACGTGTTCTACGGTTGGACTTGCTGCCA	11	+	30898331-30898380	11qA4	Mus musculus ankyrin repeat and SOCS box-containing 3 (Asb3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		2400011J03Rik	2400011J03Rik
Mus musculus	RefSeq	ILMN_192974	ILMN_246247	ASB3	NM_023906.3	NM_023906.3		65257	114205425	NM_023906.3	Asb3	NP_076395.2	ILMN_1236376	002370577	S	1649	GTTGCCACTTCCCAGAAGTCTGCAGAACTATTTGCTCTATGAAGAGGTTT	11	+	31001128-31001177	11qA4	Mus musculus ankyrin repeat and SOCS box-containing 3 (Asb3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		2400011J03Rik	2400011J03Rik
Mus musculus	RefSeq	ILMN_201343	ILMN_201343	LOC382493	XM_356533.1	XM_356533.1			38091571	XM_356533.1	LOC382493		ILMN_1216536	006560202	S	128	ATTGCGGCTGCCTCTTCAGTGACAACGCTGAGCACATTCTGCCTAGAGCC										
Mus musculus	MEEBO	ILMN_185517	ILMN_185517	8030443D09RIK	scl0278932.1_13				51706277	XM_204992	8030443D09Rik		ILMN_2427686	006100411	S	8	CTGGGGTTGAAGGAAGAACATGGTCCTCTGTATTAGTTAGGGTTCTCCAC										
Mus musculus	MEEBO	ILMN_184686	ILMN_184686	MUC2	scl31878.6.1_7				51762691	XM_133960	Muc2		ILMN_2454851	003120372	S	14	TACAACCCCCCGGACGAGTGTGAATGGCACTATGAACCCTGTGGGAACCG						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_201071	ILMN_201071	LOC381983	XM_356032.1	XM_356032.1			38088574	XM_356032.1	LOC381983		ILMN_2540971	000580709	S	682	ATTGCCCGAGGACTGGCACACCTGCACTCTCACAACTATGTGCACAGGTG										
Mus musculus	RefSeq	ILMN_233812	ILMN_233812	MYCBP	NM_019660.2	NM_019660.2		56309	84871977	NM_019660.2	Mycbp	NP_062634.2	ILMN_2933756	006660619	S	1358	CCTGGGCAGGTCAGTTAATGGTTTGGAGATTCACTATCCTCATCTGTACC	4	+	123414426-123414475	4qD2.2	Mus musculus c-myc binding protein (Mycbp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	5730488M09Rik; Amy-1; AW742590; AW552132	5730488M09Rik; Amy-1; AW742590; AW552132
Mus musculus	RefSeq	ILMN_191790	ILMN_191790	TPM2	NM_009416.2	NM_009416.2		22004	11875202	NM_009416.2	Tpm2	NP_033442.2	ILMN_2787172	000990075	S	1611	TAAAGGAAGGCACCCCGTTTACGTTACAGGCCTCCCCATCCCAGTGTCAC	4	-	43536249-43536298	4qB1	Mus musculus tropomyosin 2, beta (Tpm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A form of the tropomyosin dimer found associated with actin and the troponin complex in muscle thin filaments [goid 5862] [evidence TAS]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Trop-2; Tpm-2	Trop-2; Tpm-2
Mus musculus	RefSeq	ILMN_221902	ILMN_221902	OLFR90	NM_146477.1	NM_146477.1		258469	33238945	NM_146477.1	Olfr90	NP_666688.1	ILMN_2741848	006380239	S	791	TGCTCGAGAGAGGGGCAAGTTCTTTGGTCTCTTCTATGCTGTGGGAACTC	17	-	37270538-37270587	17qB1	Mus musculus olfactory receptor 90 (Olfr90), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-21; bM573K1.2	MOR256-21; bM573K1.2
Mus musculus	MEEBO	ILMN_184228	ILMN_184228	6330403M23RIK	scl52093.1_313						6330403M23Rik		ILMN_1222351	001510100	S	9	GCAACCGTGTTGTGCATCAGCCGGCTTGAGTTTGTTCAATATCAAAGCTG										
Mus musculus	RefSeq	ILMN_206257	ILMN_261668	EG666941	XM_988790.1	XM_988790.1		666941	94394623	XM_988790.1	EG666941	XP_993884.1	ILMN_1242846	006270674	S	73	TGGATAGACACTAAAAGTGGGAGCCAGAGAGGATAGTTCAGTCACATGCC	13	-	8454439-8454488	13qA1	PREDICTED: Mus musculus predicted gene, EG666941 (EG666941), mRNA.					
Mus musculus	RefSeq	ILMN_244344	ILMN_244344	BRWD1	NM_145125.1	NM_145125.1		93871	21553076	NM_145125.1	Brwd1	NP_660107.1	ILMN_2834573	006350561	S	7801	CACTAACAAGCCAAGTGTCGGGGAGTCTGGCCTCTGGTCGTTGTGCTACA	16	-	96097696-96097745	16qC4	Mus musculus bromodomain and WD repeat domain containing 1 (Brwd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D530019K20Rik; Wdr9; 5330419I02Rik	D530019K20Rik; Wdr9; 5330419I02Rik
Mus musculus	Riken	ILMN_205308	ILMN_205308	5330406H09RIK	ri|5330406H09|PX00053G20|AK030390|2677					AK030390	5330406H09Rik		ILMN_1216715	000620739	S	2367	GCTTCTGCGGCACCACAGGCGCTGGTCCTATTAAAGGGCATTAGATGGTG										
Mus musculus	RefSeq	ILMN_198062	ILMN_198062	LOC333749	XM_289872.2	XM_289872.2			38081306	XM_289872.2	LOC333749		ILMN_2530361	004390446	S	1084	GGGAACAATGCCCTAGAAAAAACAAGAAGTTTGCAGGAGACACATCTCAG										
Mus musculus	MEEBO	ILMN_196150	ILMN_196150	2010204K13RIK	scl54451.3.1_16				40254487	NM_023450	2010204K13Rik		ILMN_2522062	000160246	S	6	GACTGTAACTGTGGAGTTATGCACTGGACCTGGCTGGCTTCCCTAGTGGG										
Mus musculus	RefSeq	ILMN_213499	ILMN_213499	5830457O10RIK	NM_145412.3	NM_145412.3		214987	84000433	NM_145412.3	5830457O10Rik	NP_663387.3	ILMN_2708794	001990717	S	1110	TTTTTAGGTACAAACCCGGCCCCTAGGTCGGGTATGTTTCCAGGCCCAGG	8	-	109409534-109409583	8qD3	Mus musculus RIKEN cDNA 5830457O10 gene (5830457O10Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_213499	ILMN_213499	5830457O10RIK	NM_145412.3	NM_145412.3		214987	84000433	NM_145412.3	5830457O10Rik	NP_663387.3	ILMN_1249269	006280376	S	205	GAGGCTCGCTACAGCACCGGATTAGCTGGAAACCTCCTGGGAGACCTACA	8	-	109410832-109410881	8qD3	Mus musculus RIKEN cDNA 5830457O10 gene (5830457O10Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_213499	ILMN_213499	5830457O10RIK	NM_145412.3	NM_145412.3		214987	84000433	NM_145412.3	5830457O10Rik	NP_663387.3	ILMN_2911454	001990008	S	2616	AGACCCACCACATTTCTGCTTGACTGGGCCTGCGGCTCCTTTCTTCTGGG	8	-	109408028-109408077	8qD3	Mus musculus RIKEN cDNA 5830457O10 gene (5830457O10Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_213499	ILMN_213499	5830457O10RIK	NM_145412.3	NM_145412.3		214987	84000433	NM_145412.3	5830457O10Rik	NP_663387.3	ILMN_2697766	007200041	S	2588	CAGAATGGGAGGTGGACACCCACGCCACAGACCCACCACATTTCTGCTTG	8	-	109408056-109408105	8qD3	Mus musculus RIKEN cDNA 5830457O10 gene (5830457O10Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_193384	ILMN_235444	AP1S2	NM_026887.2	NM_026887.2		108012	40254483	NM_026887.2	Ap1s2	NP_081163.2	ILMN_2713173	003610274	S	2833	GGTACCCAAATGAGTTTCCCACTGAAAGAAGATCTATAAAATGTCTTAGG	X	+	160367127-160367176	XqF5	Mus musculus adaptor-related protein complex 1, sigma 2 subunit (Ap1s2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI853648; 1500012A13Rik; EST1	AI853648; 1500012A13Rik; EST1
Mus musculus	RefSeq	ILMN_193384	ILMN_235444	AP1S2	NM_026887.2	NM_026887.2		108012	40254483	NM_026887.2	Ap1s2	NP_081163.2	ILMN_2670681	004280192	S	331	CAGGACAATGAACTGATTACCCTGGAAATAATCCATCGTTACGTGGAATT	X	+	160354444-160354493	XqF5	Mus musculus adaptor-related protein complex 1, sigma 2 subunit (Ap1s2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI853648; 1500012A13Rik; EST1	AI853648; 1500012A13Rik; EST1
Mus musculus	RefSeq	ILMN_210485	ILMN_210485	PFPL	NM_019540.2	NM_019540.2		56093	148271094	NM_019540.2	Pfpl	NP_062413.2	ILMN_2606097	002350136	S	2581	GTGTCTTCACCTGAATCTCTGCATGAAAGAACAACTGGGTGGAGAGCAAC				19qA	Mus musculus pore forming protein-like (Pfpl), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Epcs50; Epcs5	Epcs50; Epcs5
Mus musculus	RefSeq	ILMN_223395	ILMN_223395	GOPC	NM_053187.2	NM_053187.2		94221	31543484	NM_053187.2	Gopc	NP_444417.2	ILMN_1238680	000270047	S	3859	CAGTTTTCTGTTCTGAACATGATGAAAGTGACGTATTCGGGTTAGGGATT	10	-	52057165-52057214	10qB3	Mus musculus golgi associated PDZ and coiled-coil motif containing (Gopc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IDA]	GOPC1; FIG; CAL; AI844555; PIST; 2210402P09Rik	GOPC1; FIG; CAL; AI844555; PIST; 2210402P09Rik
Mus musculus	RefSeq	ILMN_223935	ILMN_233819	TCF3	NM_009332.2	NM_009332.2		21415	87044902	NM_009332.2	Tcf3	NP_033358.2	ILMN_2771781	003190138	S	1409	CATGGCAGCACGCTGGACTCCCCTGCGACGCCCTCCGCAGCCTTGGCCTC	6	-	72577657-72577706	6qC1	Mus musculus transcription factor 3 (Tcf3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter during mitosis [goid 46022] [evidence IDA]; The process by which the anatomical structures of the axial mesoderm are generated and organized. Morphogenesis pertains to the creation of form [goid 48319] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells [goid 48863] [evidence IMP]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Tcf7l1; Tcf-3	Tcf7l1; Tcf-3
Mus musculus	RefSeq	ILMN_244180	ILMN_244180	BCL2L14	NM_025778.1	NM_025778.1		66813	38194231	NM_025778.1	Bcl2l14	NP_080054.1	ILMN_2890866	000060452	S	1946	CCTCTTTGTGCATAGCTTCTTACCCAGGCTGGATCACTCCTGAGCGTCTG	6	+	134404143-134404192	6qG1	Mus musculus Bcl2-like 14 (apoptosis facilitator) (Bcl2l14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		Bclg; 4933405K19Rik; AI429211; 9030625M01Rik; 4930452K23Rik	Bclg; 4933405K19Rik; AI429211; 9030625M01Rik; 4930452K23Rik
Mus musculus	Riken	ILMN_204153	ILMN_204153	C730025H23RIK	ri|C730025H23|PX00086N21|AK050179|1230					AK050179	C730025H23Rik		ILMN_2562780	004050682	S	1102	CTAGTGCCTGGGAAGTAGAGGCAGATGGATCTCTGTAGTTCTAGCCTGGC										
Mus musculus	RefSeq	ILMN_242273	ILMN_242273	OTTMUSG00000010747	NM_001081248.1	NM_001081248.1		435815	124486966	NM_001081248.1	OTTMUSG00000010747	NP_001074717.1	ILMN_3134537	002230703	A	1158	GCCTTTCTCTTTTCCCTGCTCCATAAAAATTGCAAATGCTGTTGCCAGTT	4	+	144213235-144213284	4qE1	Mus musculus predicted gene, OTTMUSG00000010747 (OTTMUSG00000010747), mRNA.					
Mus musculus	RefSeq	ILMN_215031	ILMN_215031	PSME1	NM_011189.1	NM_011189.1		19186	6755211	NM_011189.1	Psme1	NP_035319.1	ILMN_2986309	000940674	S	790	CTCAAGAAGCCCCGTGGAGAAACCAAGGGAATGATCTATTGAGCCCCCTC	14	+	56199210-56199259	14qC3	Mus musculus proteasome (prosome, macropain) 28 subunit, alpha (Psme1), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex that activates the hydrolysis of small nonubiquitinated peptides by binding to the proteasome core complex [goid 8537] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) of exogenous origin on its cell surface in association with an MHC protein complex [goid 19884] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the activation of the proteasome, a large multisubunit complex which performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis [goid 8538] [evidence IPI]	PA28a; MGC113815; AW413925	PA28a; MGC113815; AW413925
Mus musculus	RefSeq	ILMN_215031	ILMN_215031	PSME1	NM_011189.1	NM_011189.1		19186	6755211	NM_011189.1	Psme1	NP_035319.1	ILMN_2671204	006370494	S	584	AAGGCTTCCACACGCAGATCTCCAAGTACTTCTCCGAGAGGGGTGACGCC	14	+	56198808-56198857	14qC3	Mus musculus proteasome (prosome, macropain) 28 subunit, alpha (Psme1), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex that activates the hydrolysis of small nonubiquitinated peptides by binding to the proteasome core complex [goid 8537] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) of exogenous origin on its cell surface in association with an MHC protein complex [goid 19884] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the activation of the proteasome, a large multisubunit complex which performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis [goid 8538] [evidence IPI]	PA28a; MGC113815; AW413925	PA28a; MGC113815; AW413925
Mus musculus	RefSeq	ILMN_189701	ILMN_245164	MTAP7	NM_008635.1	NM_008635.1		17761	6678947	NM_008635.1	Mtap7	NP_032661.1	ILMN_1252545	003140603	S	2669	TTACTACCTGGCTCTCGTAAACACAGCTCGTCGCGGGCATCCTGCAGACC	10	+	20000288-20000337	10qA3	Mus musculus microtubule-associated protein 7 (Mtap7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized structural and/or functional features of a Leydig cell. A Leydig cell is a testosterone-secreting cell in the interstitial area, between the seminiferous tubules, in the testis [goid 33327] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IPI]; The process whose specific outcome is the progression of a Sertoli cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a Sertoli cell fate [goid 60009] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nucleus [goid 6997] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MAP7; E-MAP-115; R75000	MAP7; E-MAP-115; R75000
Mus musculus	RefSeq	ILMN_186418	ILMN_186418	V1RB8	NM_053229.1	NM_053229.1		113856	16716540	NM_053229.1	V1rb8	NP_444459.1	ILMN_1230115	000430168	S	768	CTTCTACTCAAGGATGAAGTTCAAGGATGACTCAATATTTGTCTGTGTCC	6	+	89926932-89926981	6qD1	Mus musculus vomeronasal 1 receptor, B8 (V1rb8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]		
Mus musculus	Riken	ILMN_206389	ILMN_206389	FUT8	ri|8030489B13|PX00104H04|AK078788|1250					AK078788	Fut8		ILMN_2579719	004610537	S	721	GCTGCCCCACTTCATTTATACAGAGCACATGAAACAGGTCCAATCTCCTG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The chemical reactions and pathways involving a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43112] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IMP]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence ISA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha(1,6)-linkage [goid 46921] [evidence IMP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: GDP-L-fucose + N4-{N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,3)-[N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,6)]-beta-D-mannosyl-(1,4)-N-acetyl-beta-D-glucosaminyl-(1,4)-N-acetyl-beta-D-glucosaminyl}asparagine = GDP + N4-{N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,3)-[N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,6)]-beta-D-mannosyl-(1,4)-N-acetyl-beta-D-glucosaminyl-(1,4)-[alpha-L-fucosyl-(1,6)]-N-acetyl-beta-D-glucosaminyl}asparagine [goid 8424] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214670	ILMN_214670	IRX5	NM_018826.2	NM_018826.2		54352	42476078	NM_018826.2	Irx5	NP_061296.1	ILMN_2650603	006560021	S	1783	CAGCTAGACCTGTGCAAAGACTCCCCCTATGAGTTGAAGAAAGGTATGTC	8	+	94884735-94884784	8qC5	Mus musculus Iroquois related homeobox 5 (Drosophila) (Irx5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina [goid 60040] [evidence IGI]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221446	ILMN_221446	3110009E18RIK	NM_028439.1	NM_028439.1		73103	39930446	NM_028439.1	3110009E18Rik	NP_082715.1	ILMN_1235047	005360131	S	400	CCATCTCGTCCTGGTGAAAGCGGCTGCGGACCTTTGTTCCACAAGTTTTG	1	+	122084701-122084750	1qE2.3	Mus musculus RIKEN cDNA 3110009E18 gene (3110009E18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215719	ILMN_322466	LOC100045983	XM_001476501.1	XM_001476501.1		100045983	149267059	XM_001476501.1	LOC100045983	XP_001476551.1	ILMN_2662814	000940706	S	4295	GGTGTGGGAGCAGAATGTGTTGCGAGGTTATATACACGACTGGCCTGTGT					PREDICTED: Mus musculus similar to bromodomain containing 1, transcript variant 1 (LOC100045983), mRNA.					
Mus musculus	RefSeq	ILMN_210334	ILMN_210334	NHP2L1	NM_011482.3	NM_011482.3		20826	84781724	NM_011482.3	Nhp2l1	NP_035612.2	ILMN_3058077	002350189	I	169	AAGAAGCTGCTGGACCTTGTTCAACAGTCATGTAACTACAAGCAGCTTCG	15	-	81871166-81871215	15qE1	Mus musculus NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) (Nhp2l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The union of male and female gametes to form a zygote [goid 7338] [evidence IDA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	FA-1; Fta1; Ssfa1	FA-1; Fta1; Ssfa1
Mus musculus	MEEBO	ILMN_224263	ILMN_224263	KCNK1	scl33166.4_447				6680537	NM_008430	Kcnk1		ILMN_2777530	005860228	S	2121	CCCACCTCACACTAAAGCACAATGGCAGTCCCCCTCTCCCCTGAACAGAT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IC ]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IDA]		
Mus musculus	MEEBO	ILMN_192069	ILMN_192069	THSD1	scl34000.9_671				9625040	NM_019576	Thsd1		ILMN_2484695	004040255	S	18	CGACACACTTAGATGTTTATTGTCTGTGTCCCCACCAGTTGTGACTCCCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_197621	ILMN_227132	LOC268781	XR_004663.1	XR_004663.1		268781	94398384	XR_004663.1	LOC268781		ILMN_1213753	002900376	S	706	CACCGGAGCAATGGAGCTGTCATTGCCTGCTGCTGACAACTGGAGGTTAG				15qA1	PREDICTED: Mus musculus similar to Myotubularin related protein 3 (LOC268781), misc RNA.					
Mus musculus	RefSeq	ILMN_217183	ILMN_246865	SLC30A4	NM_011774.2	NM_011774.2		22785	52630420	NM_011774.2	Slc30a4	NP_035904.2	ILMN_2679984	002750746	S	5339	GGGGTTTATCTGTGTAATGAAGACCAGATTCTTTGTATATGTACTGCATT	2	-	122507062-122507111	2qE5	Mus musculus solute carrier family 30 (zinc transporter), member 4 (Slc30a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The regulation of the levels, transport, and metabolism of zinc ions [goid 55069] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	lm; Znt4	lm; Znt4
Mus musculus	RefSeq	ILMN_213278	ILMN_310403	4932438A13RIK	XM_001475233.1	XM_001475233.1		229227	149250852	XM_001475233.1	4932438A13Rik	XP_001475283.1	ILMN_1214806	007560678	S	14354	GGTCCAAATTTCCGTTCAAAATCCTGGGCCCTTTTTCATTTAGAAGAACC	3	+	36943661-36943710	3qB	PREDICTED: Mus musculus RIKEN cDNA 4932438A13 gene (4932438A13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_213278	ILMN_310403	4932438A13RIK	XM_001475233.1	XM_001475233.1		229227	149250852	XM_001475233.1	4932438A13Rik	XP_001475283.1	ILMN_2669604	001580593	S	15701	TGTTGATAATGTCATTGGGGGTCTTTTTTATGTAGACTTGTATAAAGATC	3	+	36951799-36951848	3qB	PREDICTED: Mus musculus RIKEN cDNA 4932438A13 gene (4932438A13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_187040	ILMN_310403	4932438A13RIK	XM_001475233.1	XM_001475233.1		229227	149250852	XM_001475233.1	4932438A13Rik	XP_001475283.1	ILMN_2440650	006660300	S	4123	CCACTCCGTTCAGAAAGACTTGTTACATAGTGCCAGAAGAGATGATGGCC	3	+	36845372-36845421	3qB	PREDICTED: Mus musculus RIKEN cDNA 4932438A13 gene (4932438A13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_189557	ILMN_189557	C130089K02RIK	scl22174.1_318						C130089K02Rik		ILMN_1223441	007050333	S	15	GGGGGGTTGTTTATATGATCAGTTAAGGGCCTTCAGGACAAGGACCCTGG										
Mus musculus	MEEBO	ILMN_191628	ILMN_191628	9626978_151_RC	9626978_151_rc						9626978_151_rc		ILMN_2480763	001510093	S	19	AAAGATCAGCCCCTGACTGGATGCTCCCTTTACTTTTAGGGCTCTACGGA										
Mus musculus	RefSeq	ILMN_212506	ILMN_212506	TMEM50A	NM_027935.2	NM_027935.2		71817	62990167	NM_027935.2	Tmem50a	NP_082211.1	ILMN_2819679	006510286	S	959	TGATGGAGAAATGGTGGAGTCTTTGGGGTGAGGATTCGCTCTGGGGTCCA	4	-	134453851-134453900	4qD3	Mus musculus transmembrane protein 50A (Tmem50a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			Smp1; RP23-79J18.2; CAM; 3200001F09Rik	Smp1; RP23-79J18.2; CAM; 3200001F09Rik
Mus musculus	RefSeq	ILMN_218160	ILMN_218160	DEFB2	NM_010030.1	NM_010030.1		13215	6753623	NM_010030.1	Defb2	NP_034160.1	ILMN_2692412	004070601	S	199	CCTGGGAGCTGTTTCCCAGAGAAGAACCCCTGTTGCAAGTACATGAAATG	8	+	22953848-22953897	8qA2	Mus musculus defensin beta 2 (Defb2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		MGC129140; MGC129141	MGC129140; MGC129141
Mus musculus	Riken	ILMN_202788	ILMN_202788	4933414E15RIK	ri|4933414E15|PX00020E16|AK030190|2214					AK030190	4933414E15Rik		ILMN_1234019	006420398	S	1841	GTTGGATGTTCACTTCATGCTGGGCCATAGGAATAGACCTGTCCTCGTGG										
Mus musculus	MEEBO	ILMN_193332	ILMN_193332	EIF2AK1	scl27006.12_524				7305014	NM_013557	Eif2ak1		ILMN_2709397	004220711	S	2651	TCCACTTGGCATCATCCTGCAGCTTGCCCTAAAGTGATCTCAGCAGCTAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 46986] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 11560503] [evidence IEP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IDA]		
Mus musculus	RefSeq	ILMN_184508	ILMN_240926	SPTLC2	NM_011479.3	NM_011479.3		20773	142366849	NM_011479.3	Sptlc2	NP_035609.1	ILMN_2691623	007210551	S	3476	GGGCTTGCAAAAGTAACAAGCCTTAAGCAGTGAACGCGCCTGCTAGTCTT	12	-	88649067-88649116	12qD2	Mus musculus serine palmitoyltransferase, long chain base subunit 2 (Sptlc2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + L-serine = CoA + 3-dehydro-D-sphinganine + CO2 [goid 4758] [evidence IEA]	AI173915; mKIAA0526; LCB2	AI173915; mKIAA0526; LCB2
Mus musculus	Riken	ILMN_203538	ILMN_203538	E130202F10RIK	ri|E130202F10|PX00092E15|AK053683|3993					AK053683	E130202F10Rik		ILMN_2558071	005870161	S	3779	TCCCCAGCTCCCGTGCCTGTGGGAACACTTTTACAAACATCCAGCGCTCG										
Mus musculus	RefSeq	ILMN_187881	ILMN_245580	TMCO7	NM_173037.1	NM_173037.1		272538	27370559	NM_173037.1	Tmco7	NP_766625.1	ILMN_1241914	006200133	S	4023	GTGGCCTGCCACCAGCTCACTGAAACAACTTCAGATTTAGCACTGTGTTC	8	+	109374953-109375002	8qD3	Mus musculus transmembrane and coiled-coil domains 7 (Tmco7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			E330010G16; AW413431	E330010G16; AW413431
Mus musculus	RefSeq	ILMN_218244	ILMN_218244	OAS1C	NM_033541.2	NM_033541.2		114643	31981455	NM_033541.2	Oas1c	NP_291019.1	ILMN_2801770	001510612	S	1898	GGGCCCAGGTAATTGCCAGAAAGGGGTGGACAGAGAAAAACCAAACTGTT	5	-	121061154-121061203	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1C (Oas1c), mRNA.			Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]; Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. Requires binding of double-stranded RNA [goid 1730] [evidence IDA]	Oasl5; Oasl2; MGC124107	Oasl5; Oasl2; MGC124107
Mus musculus	RefSeq	ILMN_220990	ILMN_220990	PLA2G2C	NM_008868.2	NM_008868.2		18781	142367671	NM_008868.2	Pla2g2c	NP_032894.1	ILMN_2729585	000730703	S	1175	ACACAGCCCAGGAGCCTCGCCTGGAATCTCCTCATTTGCACCAGGTCTGA	4	+	138300221-138300270	4qD3	Mus musculus phospholipase A2, group IIC (Pla2g2c), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211650	ILMN_211650	KCNAB1	NM_010597.2	NM_010597.2		16497	31543027	NM_010597.2	Kcnab1	NP_034727.2	ILMN_2915671	006130471	S	3055	CTAGCTAGCCTCCAGCAGGCAACTTGGGAGTTTCACCCGTGAATATCTGA	3	+	65181951-65182000	3qE1	Mus musculus potassium voltage-gated channel, shaker-related subfamily, beta member 1 (Kcnab1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Kvbeta1.1; Akr8a8; mKv(beta)1	Kvbeta1.1; Akr8a8; mKv(beta)1
Mus musculus	RefSeq	ILMN_215090	ILMN_215090	METAP1	NM_175224.4	NM_175224.4		75624	146198850	NM_175224.4	Metap1	NP_780433.1	ILMN_1230913	005290369	S	2132	GCTGCTATCCTGTATTGCAAATGCACCTCTCCTCGGTCGAGTTGAGAGTC				3qG3	Mus musculus methionyl aminopeptidase 1 (Metap1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA0094; AW047992; mKIAA0094; 1700029C17Rik	KIAA0094; AW047992; mKIAA0094; 1700029C17Rik
Mus musculus	RefSeq	ILMN_219036	ILMN_260175	1700029H14RIK	NM_001080781.1	NM_001080781.1		66501	124244074	NM_001080781.1	1700029H14Rik	NP_001074250.1	ILMN_1241241	003400553	S	952	AGGGCCAGAGTGACAGCACCCAACGGATACCCAAGGCAAGAGACCCTCTT	8	-	13551668-13551717	8qA1.1	Mus musculus RIKEN cDNA 1700029H14 gene (1700029H14Rik), transcript variant 2, mRNA.					
Mus musculus	RefSeq	ILMN_197243	ILMN_197243	LOC218297	XM_127391.2	XM_127391.2			38074753	XM_127391.2	LOC218297		ILMN_1255505	006330370	S	1824	GTTTGTAGTTGATAAGAGGGTGTTCACGCTGGCTTTTGGGCTGTACGGCC										
Mus musculus	MEEBO	ILMN_222849	ILMN_222849	5730485H21RIK	scl35555.13_67				51764987	XM_486240	5730485H21Rik		ILMN_2755727	003520307	S	1309	CACAAGGCCTCGAGGTTTTCCCAGGAGCACGAAGAGATGAACGCCAAGTT										
Mus musculus	MEEBO	ILMN_212459	ILMN_212459	2610024N24RIK	scl071810.6_21	XM_128698.5			38082729	XM_128698.5	2610024N24Rik		ILMN_2654003	000510768	S	409	CTGCACGGGGCCAGCAACGTCTGTATCACCAGAAAACCTCACGCAGAGGA										
Mus musculus	Riken	ILMN_206869	ILMN_206869	D930043G21RIK	ri|D930043G21|PX00203A19|AK086640|1017					AK086640	D930043G21Rik		ILMN_2583296	001340441	S	208	GGCCATGCGTCTTAGTACTGCCGTTTCCTATGGGTCTATGGGGGACATTT										
Mus musculus	RefSeq	ILMN_216958	ILMN_249654	ANTXR2	NM_133738.1	NM_133738.1		71914	50355938	NM_133738.1	Antxr2	NP_598499.1	ILMN_1214412	006510463	S	3350	CAGTGGCCGGGTCAGTGGGATGTCTCTCTGCGAGCACAAAGGCTTATCAA	5	-	98314058-98314107	5qE3	Mus musculus anthrax toxin receptor 2 (Antxr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CMG-2; 2310046B19Rik; AW561899; cI-35; CMG2	CMG-2; 2310046B19Rik; AW561899; cI-35; CMG2
Mus musculus	RefSeq	ILMN_200094	ILMN_249654	ANTXR2	NM_133738.1	NM_133738.1		71914	50355938	NM_133738.1	Antxr2	NP_598499.1	ILMN_1236521	007380450	S	1691	ATCCAGACCACCTCGACCCAGACCCACACACCAGGCACCTCAGACAAAGT	5	-	98367438-98367487	5qE3	Mus musculus anthrax toxin receptor 2 (Antxr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CMG-2; 2310046B19Rik; AW561899; cI-35; CMG2	CMG-2; 2310046B19Rik; AW561899; cI-35; CMG2
Mus musculus	RefSeq	ILMN_210837	ILMN_228524	PEAR1	NM_152799.2	NM_152799.2		73182	74096450	NM_152799.2	Pear1	NP_690012.2	ILMN_2609711	005360451	S	186	TTGAGCACTGGGATCCACAGAACATCACCTGGCTGCCTAGGCCCATGCTG	3	-	87566143-87566192	3qF1	Mus musculus platelet endothelial aggregation receptor 1 (Pear1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Pear1; Megf12	Pear1; Megf12
Mus musculus	MEEBO	ILMN_195665	ILMN_195665	BC006965	scl39372.21_84				22122512	NM_146031	BC006965		ILMN_2517580	000780594	S	11	CTTCCAAAGGGTGTCTAGTAAATGTAGACGGGATGGTGGCAGGTGACTGC										
Mus musculus	MEEBO	ILMN_195665	ILMN_195665	BC006965	scl39372.21_84				22122512	NM_146031	BC006965		ILMN_2718524	002850603	S	1123	ACAGTGTCCCCAGTCTCATGTTCCTTTTGCCTTAGGAAATCCTTGGGGTC										
Mus musculus	RefSeq	ILMN_262070	ILMN_262070	ACY1L2	NM_001034867.1	NM_001034867.1		242377	77861890	NM_001034867.1	Acy1l2	NP_001030039.1	ILMN_3160507	003780608	S	997	GCTTACCCTTGGGAGGGTGTGAACGCCTTGGACGCTGCAGTTCTTGCCTA	4	-	33270104-33270153	4qA5	Mus musculus aminoacylase 1-like 2 (Acy1l2), mRNA.				Gm424	Gm424
Mus musculus	Riken	ILMN_206126	ILMN_206126	C630026L07RIK	ri|C630026L07|PX00084F03|AK083199|3777					AK083199	C630026L07Rik		ILMN_1256908	003140594	S	3469	AGGGGATCTTCCTGGCGTCTTCGCATGTGCCATGTCCTGTGGATGGGACT										
Mus musculus	Riken	ILMN_206519	ILMN_206519	4930505N22RIK	ri|D830035H17|PX00199K04|AK085966|482					AK085966	4930505N22Rik		ILMN_2580707	001780100	S	404	TCAGATGCCGGGTCCTGCGCTCTTCCGTTTTTAGCACCCACTTTTTGCAG										
Mus musculus	MEEBO	ILMN_212059	ILMN_212059	BC043944	scl18356.4.1_47				51706520	XM_485100	BC043944		ILMN_1217779	001050634	S	794	GGCCAACGAGGATACTGTTACTTTGAATTCACCGTGCCTGGGTATATCCC										
Mus musculus	RefSeq	ILMN_248819	ILMN_248819	OLFR699	NM_001011862.1	NM_001011862.1		258180	58801485	NM_001011862.1	Olfr699	NP_001011862.1	ILMN_2789964	004730626	S	420	CTGCTGGCTTGGAGTAGCCACATCATGGATCCTGGGACTTCTGAGTGCTC	7	-	113934044-113934093	7qE3	Mus musculus olfactory receptor 699 (Olfr699), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR283-10P	MOR283-10P
Mus musculus	MEEBO	ILMN_209982	ILMN_209982	GNPDA1	scl026384.8_46				6754029	NM_011937	Gnpda1		ILMN_2750548	006130551	S	78	TTCCCAGGCCAGTGAGTGGGCGGCCAAGTATATTAGGAACCGTATCATCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence TAS]; The chemical reactions and pathways involving glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin [goid 6041] [evidence ISA]; The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism [goid 6002] [evidence ISA]; The chemical reactions and pathways resulting in the formation of fructose, the ketohexose arabino-2-hexulose [goid 46370] [evidence ISA]; The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3 [goid 4342] [evidence ISS]; Catalysis of the reaction: D-glucosamine 6-phosphate + H2O = D-fructose 6-phosphate + NH3 [goid 4342] [evidence ISA]		
Mus musculus	RefSeq	ILMN_189679	ILMN_225841	SLC7A11	NM_011990.2	NM_011990.2		26570	80861466	NM_011990.2	Slc7a11	NP_036120.1	ILMN_2463432	003800458	S	2848	CATCAGCATGGGAGACATTGCCCATAAATCTCCAAGTATCAGGCTTTCTC	3	-	50175187-50175236	3qC	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 (Slc7a11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	xCT; AI451155; 9930009M05Rik; sut	xCT; AI451155; 9930009M05Rik; sut
Mus musculus	RefSeq	ILMN_225841	ILMN_225841	SLC7A11	NM_011990.2	NM_011990.2		26570	80861466	NM_011990.2	Slc7a11	NP_036120.1	ILMN_2948143	000520470	S	8858	GTTCCACAGCGAAGTGAGCTCCCTCTTGGGAGAGTGCTGCTGCAACAAAC	3	-	50169177-50169226	3qC	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 11 (Slc7a11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	xCT; AI451155; 9930009M05Rik; sut	xCT; AI451155; 9930009M05Rik; sut
Mus musculus	RefSeq	ILMN_213954	ILMN_213954	PDLIM3	NM_016798.2	NM_016798.2		53318	31980792	NM_016798.2	Pdlim3	NP_058078.1	ILMN_2885990	002000482	S	1439	AACAAACTCCGCAGGTGTCTGTGTCTGTCATTCCTAAAGTGCATGTCAGG	8	+	47418224-47418273	8qB1.1	Mus musculus PDZ and LIM domain 3 (Pdlim3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IPI]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence TAS]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence TAS]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IPI]	AI463105; Actn2lp; ALP	AI463105; Actn2lp; ALP
Mus musculus	RefSeq	ILMN_223566	ILMN_322555	LOC100044183	XM_001471817.1	XM_001471817.1		100044183	149267713	XM_001471817.1	LOC100044183	XP_001471867.1	ILMN_2765879	000150228	S	634	TTGACTATTCTTATCTCTTATACACTTGTTTTGTTTTCAATCCTAAAGCA					PREDICTED: Mus musculus hypothetical protein LOC100044183 (LOC100044183), mRNA.					
Mus musculus	RefSeq	ILMN_196880	ILMN_196880	LOC353579	XM_125868.3	XM_125868.3			38049368	XM_125868.3	LOC353579		ILMN_2526125	001300209	S	105	CTATGTACACCACGCTTCCCCCAAGATGAGCCTGACACTGGTGCACGTCA										
Mus musculus	RefSeq	ILMN_231264	ILMN_231264	ANXA4	NM_013471.1	NM_013471.1		11746	7304888	NM_013471.1	Anxa4	NP_038499.1	ILMN_2935012	003370630	S	1517	GCTCTGCCTAGCATCGTAGTTGACAGTTGCTGAGTATGGTGGGGCTTGTT	6	-	86687242-86687291	6qD1	Mus musculus annexin A4 (Anxa4), mRNA.	The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence ISA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AW106930; AIV; Xanx-4; AI265406; Anx4	AW106930; AIV; Xanx-4; AI265406; Anx4
Mus musculus	RefSeq	ILMN_199832	ILMN_199832	LOC383962	XM_357350.1	XM_357350.1			38077745	XM_357350.1	LOC383962		ILMN_1246196	004070504	S	448	GGAGTCGTGTTCAAACTAAGACCAGAGGCGAATGAATCGCTGGAGAGGGG										
Mus musculus	RefSeq	ILMN_216769	ILMN_216769	SNRPB	NM_009225.2	NM_009225.2		20638	124378002	NM_009225.2	Snrpb	NP_033251.1	ILMN_1239922	001470209	S	828	TCACACAGCATTATGTCAGTAGCTCAGAGGCGATGTGGACCCTGTTCCCC	2	-	129997615-129997664	2qF1	Mus musculus small nuclear ribonucleoprotein B (Snrpb), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SMB; AU018828; SNRNP-B; SM-B; SM11; AL024368	SMB; AU018828; SNRNP-B; SM-B; SM11; AL024368
Mus musculus	RefSeq	ILMN_216769	ILMN_216769	SNRPB	NM_009225.2	NM_009225.2		20638	124378002	NM_009225.2	Snrpb	NP_033251.1	ILMN_1223667	005700703	S	723	ATGGGTCCCCCAATGGGGCTCCCTCCTGGCCGAGGAACTCCAATGGGCAT	2	-	129998379-129998428	2qF1	Mus musculus small nuclear ribonucleoprotein B (Snrpb), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SMB; AU018828; SNRNP-B; SM-B; SM11; AL024368	SMB; AU018828; SNRNP-B; SM-B; SM11; AL024368
Mus musculus	Riken	ILMN_203551	ILMN_203551	9330129P17RIK	ri|9330129P17|PX00105P19|AK033968|2732					AK033968	9330129P17Rik		ILMN_1231219	002680731	S	2469	GCCACCATAAGATGACTGTGGAAGGGTGGAAGGGTTCTCGCTGTTGGCTG										
Mus musculus	MEEBO	ILMN_194092	ILMN_194092	IKBKAP	scl24309.37_524				27734085	NM_026079	Ikbkap		ILMN_2503306	001170184	S	3	CATTGACTGACCCATGTTTCATTGTTTCCAAGAGATCTTTGGAAGATGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223827	ILMN_223827	4921536K21RIK	scl40590.3_503				13385653	NM_026150	4921536K21Rik		ILMN_2770021	004590452	S	2336	CACCAGCCCCTTCCTGCTACACTCACGAGAGGAAGCATGTTGTATGTCTC										
Mus musculus	RefSeq	ILMN_237871	ILMN_237871	OTTMUSG00000000281	NM_001081645.1	NM_001081645.1		623180	126032306	NM_001081645.1	OTTMUSG00000000281	NP_001075114.1	ILMN_2829549	004900209	S	505	GGAGGCTATGTGCCAGGTCCTTGGTTTGATGGGCACGGTAACCCACCAGC	4	+	73270580-73270595:73270874-73270907	4qC3	Mus musculus predicted gene, OTTMUSG00000000281 (OTTMUSG00000000281), mRNA.					
Mus musculus	RefSeq	ILMN_245272	ILMN_245272	OLFR566	NM_001011536.1	NM_001011536.1		258168	58372143	NM_001011536.1	Olfr566	NP_001011536.1	ILMN_3162439	006620500	S	685	CGCTCTGTCCTCAGTATCGCCTCCTCTGAAGAAAGGCACAAGACCTTCAG	7	-	110005051-110005100	7qE3	Mus musculus olfactory receptor 566 (Olfr566), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR14-7P	MOR14-7P
Mus musculus	RefSeq	ILMN_225409	ILMN_225409	LOC547343	NM_001034908.1	NM_001034908.1		547343	77861900	NM_001034908.1	LOC547343	NP_001030080.1	ILMN_2944011	001400132	S	1065	GTCTCTCCAAGATTGTAAAGCGTGAAGACAGCTGCCTGGACTGCACTGAG	17	+	34874760-34874779:34874919-34874923:34874924-34874948		Mus musculus similar to H-2 class I histocompatibility antigen, L-D alpha chain precursor (LOC547343), mRNA.					
Mus musculus	RefSeq	ILMN_185599	ILMN_258808	WDR76	NM_030234.2	NM_030234.2		241627	124487320	NM_030234.2	Wdr76	NP_084510.2	ILMN_2428388	001770754	S	4085	TCTGCCTGGTGTCACAGTGTATTCAACATTTTTCCATTGTTATTTGCCAA	2	+	121370436-121370485	2qE5	Mus musculus WD repeat domain 76 (Wdr76), mRNA.				5830411K18Rik; AA517836; 6030457D09	5830411K18Rik; AA517836; 6030457D09
Mus musculus	RefSeq	ILMN_185322	ILMN_258808	WDR76	NM_030234.2	NM_030234.2		241627	124487320	NM_030234.2	Wdr76	NP_084510.2	ILMN_2426069	003120598	S	4132	GGCAAATAACAATGGAAAAATGTTGAATACACTGTGACACCAGGCAGATA	2	+	121370483-121370532	2qE5	Mus musculus WD repeat domain 76 (Wdr76), mRNA.				5830411K18Rik; AA517836; 6030457D09	5830411K18Rik; AA517836; 6030457D09
Mus musculus	RefSeq	ILMN_215983	ILMN_215983	SOCS7	NM_138657.3	NM_138657.3		192157	76253931	NM_138657.3	Socs7	NP_619598.1	ILMN_2665994	003780343	S	1743	ACTATGATCCTCAGGAAGAGGTGTACCTGTCCCTAAAGGAAGCGCAGCTC	11	+	97250912-97250961	11qD	Mus musculus suppressor of cytokine signaling 7 (Socs7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Nap4; C85125; 2310063P06Rik	Nap4; C85125; 2310063P06Rik
Mus musculus	RefSeq	ILMN_215983	ILMN_215983	SOCS7	NM_138657.3	NM_138657.3		192157	76253931	NM_138657.3	Socs7	NP_619598.1	ILMN_2721520	000620326	S	1751	CCTCAGGAAGAGGTGTACCTGTCCCTAAAGGAAGCGCAGCTCATTTCCAA	11	+	97250920-97250969	11qD	Mus musculus suppressor of cytokine signaling 7 (Socs7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	Nap4; C85125; 2310063P06Rik	Nap4; C85125; 2310063P06Rik
Mus musculus	RefSeq	ILMN_186285	ILMN_186285	TXNL6	NM_145598.1	NM_145598.1		234404	21704203	NM_145598.1	Txnl6	NP_663573.1	ILMN_2434217	003610390	S	1742	CACTCACCCCTTTTAGGAAATAAAATGTGTACAGTTGCATGGGAATCTGC	8	-	74084948-74084997	8qB3.3	Mus musculus thioredoxin-like 6 (Txnl6), mRNA.				MGC27601; RdCVF; A930031O08Rik; MGC28867	MGC27601; RdCVF; A930031O08Rik; MGC28867
Mus musculus	RefSeq	ILMN_186285	ILMN_186285	TXNL6	NM_145598.1	NM_145598.1		234404	21704203	NM_145598.1	Txnl6	NP_663573.1	ILMN_2804701	000450075	S	2207	GGCAGGGTTGCTCTGTAAATGTGCTTTAAAAACAAACACAAAACAGCGAG	8	-	74084483-74084532	8qB3.3	Mus musculus thioredoxin-like 6 (Txnl6), mRNA.				MGC27601; RdCVF; A930031O08Rik; MGC28867	MGC27601; RdCVF; A930031O08Rik; MGC28867
Mus musculus	RefSeq	ILMN_186285	ILMN_186285	TXNL6	NM_145598.1	NM_145598.1		234404	21704203	NM_145598.1	Txnl6	NP_663573.1	ILMN_1220574	001690411	S	2181	GAATGCTTCCAAACTAGATAGATATAGGCAGGGTTGCTCTGTAAATGTGC	8	-	74084509-74084558	8qB3.3	Mus musculus thioredoxin-like 6 (Txnl6), mRNA.				MGC27601; RdCVF; A930031O08Rik; MGC28867	MGC27601; RdCVF; A930031O08Rik; MGC28867
Mus musculus	RefSeq	ILMN_192243	ILMN_192243	V1RF2	NM_134199.3	NM_134199.3		171233	120407051	NM_134199.3	V1rf2	NP_598960.3	ILMN_2486295	003460538	S	1239	CCCTTTCTGCTCATGAACCACTACTCCATAGCATCTAGCCACTGTGTTCC	17	+	21399285-21399334	17qA3.2	Mus musculus vomeronasal 1 receptor, F2 (V1rf2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	Riken	ILMN_205277	ILMN_205277	E330039I02RIK	ri|E330039I02|PX00312N16|AK054542|2528					AK054542	E330039I02Rik		ILMN_1228983	002850132	S	2049	GCCCTGGCATTGGAGCTACGGAACATTGTGAGCACTGTGTGAGTGCTAGA										
Mus musculus	RefSeq	ILMN_214931	ILMN_214931	2310021H06RIK	NM_025990.2	NM_025990.2		67135	141802605	NM_025990.2	2310021H06Rik	NP_080266.1	ILMN_2653590	001450255	S	605	GCTGTGAGAGATTCTTATGGGAGGAGTCGCCTGGTCATTGGTGACTGTAT	2	+	153991716-153991765	2qH1	Mus musculus RIKEN cDNA 2310021H06 gene (2310021H06Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	MGC144358; 2310074B19Rik; MGC144359	MGC144358; 2310074B19Rik; MGC144359
Mus musculus	RefSeq	ILMN_209682	ILMN_310393	LOC100048483	XM_001480453.1	XM_001480453.1		100048483	149241413	XM_001480453.1	LOC100048483	XP_001480503.1	ILMN_2598201	007100632	S	257	CATCCTTTGACTAGACCACTTTTGCCAGCCCACCTTGATCATGTTGCCTG					PREDICTED: Mus musculus similar to cytochrome c oxidase subunit VIII (LOC100048483), mRNA.					
Mus musculus	RefSeq	ILMN_197701	ILMN_197701	LOC380986	XM_354897.1	XM_354897.1			38077460	XM_354897.1	LOC380986		ILMN_2529062	004760673	S	1764	CCCAGGTCCCAAGCCCAACATATGTCTGCAGCCCCTAGGTGACACACAGT										
Mus musculus	Riken	ILMN_204100	ILMN_204100	TRRP5	ri|A230027D19|PX00127O01|AK038531|2783					AK038531	Trrp5		ILMN_1232820	003420341	S	2719	GGGAGGATGAGATGGAGAGAGGGAAGGAGTTTTGAAAGGAGAGAGGGAGG										
Mus musculus	RefSeq	ILMN_197903	ILMN_327793	OTTMUSG00000010750	NM_001085536.1	NM_001085536.1		546849	148222100	NM_001085536.1	OTTMUSG00000010750	NP_001079005.1	ILMN_1232164	001070519	S	807	GACAGGAGCTTTTGTGCCCCTGGACACCTGGAAAAAGTACAGCAAGTGGC				4qE1	Mus musculus predicted gene, OTTMUSG00000010750 (OTTMUSG00000010750), mRNA.					
Mus musculus	RefSeq	ILMN_217604	ILMN_217604	CCR5	NM_009917.4	NM_009917.4		12774	145279223	NM_009917.4	Ccr5	NP_034047.2	ILMN_2685392	001240646	S	1480	CCATAAAGTCGCTTCTTGCTGTCTATGGATGTGCCTGACTGCCAACAGGG				9qF4	Mus musculus chemokine (C-C motif) receptor 5 (Ccr5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IDA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence ISO]	Cmkbr5; AM4-7; CD195	Cmkbr5; AM4-7; CD195
Mus musculus	RefSeq	ILMN_198139	ILMN_258558	SYNGAP1	XM_985548.2	XM_985548.2		240057	149268701	XM_985548.2	Syngap1	XP_990642.2	ILMN_1216696	006040438	S	3685	CGCTTGAGACAGCAGCAGGTGGAGAAGGACTCCCAGATCAAGAGCATCAT	17	+	27101928-27101977	17qA3.3	PREDICTED: Mus musculus synaptic Ras GTPase activating protein 1 homolog (rat) (Syngap1), mRNA.	Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50803] [evidence IMP]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IMP]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43408] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IDA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IDA]		
Mus musculus	Riken	ILMN_202351	ILMN_202351	4930438O03RIK	ri|4930438O03|PX00031N21|AK015339|903					AK015339	4930438O03Rik		ILMN_1230112	003120044	S	637	GAAGGGGAGGGCATGTTGCGGCTGAGTGGAGATTCTAGACCCAGATGGTG										
Mus musculus	Riken	ILMN_204578	ILMN_204578	C130031L21RIK	ri|C130031L21|PX00168I14|AK048047|2766					AK048047	C130031L21Rik		ILMN_2566064	003780685	S	2323	GCAGTTGCTTAAGCTGTTTTAGGAACACCACTCTTATCCCCATGGTGGTC										
Mus musculus	RefSeq	ILMN_222238	ILMN_222238	HTRA1	NM_019564.1	NM_019564.1		56213	9625026	NM_019564.1	Htra1	NP_062510.1	ILMN_2966104	006980093	S	1575	GGACCTTTGTCCAACATTTTGCTTGTTCAGGGAACACCCCTGCCGACAGA	7	+	130776368-130776417	7qF3	Mus musculus HtrA serine peptidase 1 (Htra1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Prss11; HTRA; RSPP11; AI429470; L56	Prss11; HTRA; RSPP11; AI429470; L56
Mus musculus	RefSeq	ILMN_211271	ILMN_211271	ALS2CR11	NM_175200.3	NM_175200.3		73463	142382477	NM_175200.3	Als2cr11	NP_780409.1	ILMN_2614186	006550242	S	1839	AGGAAAACCCAAAAGAATTATTTTTAAAGTCTACTCAATACCAATAAATT	1	-	59107592-59107641	1qC1.3	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11 (human) (Als2cr11), mRNA.				1700052H20Rik	1700052H20Rik
Mus musculus	RefSeq	ILMN_207481	ILMN_207481	PCDH7	XM_132034.1	XM_132034.1			20830923	XM_132034.1	Pcdh7		ILMN_1260538	002060059	I	736	CAACTATGAGAGGACCACGCCGGATGGCAGTGTTGGTGAGGCAGAGCATA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_188648	ILMN_322472	A230051N06RIK	XM_001480286.1	XM_001480286.1		320593	149268764	XM_001480286.1	A230051N06Rik	XP_001480336.1	ILMN_1246805	000830451	S	434	TGGTCAACGAGATGTTATGAGTGCCTCTGGGTGTACTAATTTCCAAAGTG	17	+	56381929-56381978	17qD	PREDICTED: Mus musculus RIKEN cDNA A230051N06 gene (A230051N06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216411	ILMN_216411	ABO	NM_030718.2	NM_030718.2		80908	31560018	NM_030718.2	Abo	NP_109643.2	ILMN_2824780	002030615	S	1430	CAGGAAGCATCAGCCTGCAGTCCACAGAGGGACATAGTTCACTCGGGGCA	2	-	26664811-26664860	2qA3	Mus musculus ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase) (Abo), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose = UDP + glycoprotein-N-acetyl-alpha-D-galactosaminyl-(1,3)-(alpha-L-fucosyl-(1,2))-D-galactose [goid 4380] [evidence IDA]; Catalysis of the reaction: UDP-galactose + glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose = UDP + glycoprotein-alpha-D-galactosyl-(1,3)-(alpha-L-fucosyl-(1,2))-D-galactose [goid 4381] [evidence IDA]		
Mus musculus	RefSeq	ILMN_216411	ILMN_216411	ABO	NM_030718.2	NM_030718.2		80908	31560018	NM_030718.2	Abo	NP_109643.2	ILMN_2824783	005560338	S	1610	GGTATTTGGGATTGAACCCAGTGTCTCGTGAATGCTATTCAGGCACGCAG	2	-	26664631-26664680	2qA3	Mus musculus ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase) (Abo), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose = UDP + glycoprotein-N-acetyl-alpha-D-galactosaminyl-(1,3)-(alpha-L-fucosyl-(1,2))-D-galactose [goid 4380] [evidence IDA]; Catalysis of the reaction: UDP-galactose + glycoprotein-alpha-L-fucosyl-(1,2)-D-galactose = UDP + glycoprotein-alpha-D-galactosyl-(1,3)-(alpha-L-fucosyl-(1,2))-D-galactose [goid 4381] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221811	ILMN_250945	LOC674449	XM_975955.1	XM_975955.1		674449	94366473	XM_975955.1	LOC674449	XP_981049.1	ILMN_2740641	005050079	S	1674	ATTTTTAATCTCGAGTATTTAGTTGCCAAAGTAGAAAAGGTATTTTGATA					PREDICTED: Mus musculus similar to ADP-ribosylation factor-like 6 interacting protein 6, transcript variant 2 (LOC674449), mRNA.					
Mus musculus	RefSeq	ILMN_222302	ILMN_222302	2310003L22RIK	NM_027093.3	NM_027093.3		69487	146141221	NM_027093.3	2310003L22Rik	NP_081369.1	ILMN_1216813	001980753	S	1106	CCGTGTCATTTGGAGAGCTAGCAAAACTAAATGATGTCATGTCGCATGAG				2qF3	Mus musculus RIKEN cDNA 2310003L22 gene (2310003L22Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222302	ILMN_222302	2310003L22RIK	NM_027093.3	NM_027093.3		69487	146141221	NM_027093.3	2310003L22Rik	NP_081369.1	ILMN_2747677	005220068	S	930	TTCTTGGAACAGAAAAGCCCTGCTGCACCGAGACACAATGCTGGCAGCTG				2qF3	Mus musculus RIKEN cDNA 2310003L22 gene (2310003L22Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213873	ILMN_318965	LOC100048083	XR_034387.1	XR_034387.1		100048083	149254463	XR_034387.1	LOC100048083		ILMN_1222383	004180168	S	2174	CCCTGGGTCAGGATGTGCAAAGCCCGGGACTCAGCTGCCATCTACCATTA					PREDICTED: Mus musculus similar to Tect2 (LOC100048083), misc RNA.					
Mus musculus	MEEBO	ILMN_188972	ILMN_188972	PCDH15	scl5769.5.1_126				12963484	NM_023115	Pcdh15		ILMN_1254906	001340113	S	17	GCCTGTCTTTTAGTCCTCTATCTGTGTGACACCTGTTACTGACCCGGTGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The series of events involved in equilibrioception in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. During equilibrioception, mechanical stimuli may be in the form of input from pressure receptors or from the labyrinth system of the inner ears [goid 50973] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198660	ILMN_254235	LOC671784	XR_003570.1	XR_003570.1		671784	94409277	XR_003570.1	LOC671784		ILMN_1219433	005390465	S	413	CTGTGGATGACAAGCAGCCCTATGAGAAGAAAACTGCCAAGTTGGAGAAG					PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC671784), mRNA.					
Mus musculus	MEEBO	ILMN_186864	ILMN_186864	D930017K21RIK	scl46933.6.1_83				51829821	XM_147957	D930017K21Rik		ILMN_1219758	003190762	S	2258	GCAGTGCCAGGAGAACTCCCAGCCTCAGCCGACATTGAGGAACAGACAAG										
Mus musculus	MEEBO	ILMN_186864	ILMN_186864	D930017K21RIK	scl46933.6.1_83				51829821	XM_147957	D930017K21Rik		ILMN_1256713	004490431	S	1	AAAGATGCCATGAACGCCGCGGGCAAGAGACCTCAAGGTGTCCCGGGTAC										
Mus musculus	RefSeq	ILMN_219401	ILMN_245565	1700029F09RIK	XM_919077.2	XM_919077.2		75623	94363491	XM_919077.2	1700029F09Rik	XP_924170.1	ILMN_2708340	006420110	S	663	GAAGATCTCTTTCGTATAAAGGATCCTGTACTGTTTGTGTCGGGCTCAGC				1qC1.1	PREDICTED: Mus musculus RIKEN cDNA 1700029F09 gene, transcript variant 20 (1700029F09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198322	ILMN_249366	EG622384	XM_909657.2	XM_909657.2		622384	94404228	XM_909657.2	EG622384	XP_914750.1	ILMN_1229277	000270273	S	362	GGAGAGCACGGTAACAGGAAATCTGAAGGATGCGAAGATGACTGTGGAGC				18qA1	PREDICTED: Mus musculus predicted gene, EG622384 (EG622384), mRNA.					
Mus musculus	RefSeq	ILMN_198860	ILMN_198860	LOC244335	XM_146200.3	XM_146200.3			38089130	XM_146200.3	LOC244335		ILMN_1238450	006040471	S	1630	GAACCCCCTGTGGATCCTAACCAGGAGCTCAAAGACTCTAGTCAAACACC										
Mus musculus	RefSeq	ILMN_185415	ILMN_249932	TTC18	XM_980494.1	XM_980494.1		76670	94396677	XM_980494.1	Ttc18	XP_985588.1	ILMN_1213134	002650161	S	3060	CATGCATGCCTGTAAGAGATCACCTTCGTGCCTCACTTGGCTAGGACTAG				14qA3	PREDICTED: Mus musculus tetratricopeptide repeat domain 18 (Ttc18), mRNA.					
Mus musculus	RefSeq	ILMN_185415	ILMN_249932	TTC18	XM_980494.1	XM_980494.1		76670	94396677	XM_980494.1	Ttc18	XP_985588.1	ILMN_2440261	001500630	S	3292	CAGGCTCTACTTGAAGAAATCCACACTGTACAGGAAATGGTTGGTTTTGG				14qA3	PREDICTED: Mus musculus tetratricopeptide repeat domain 18 (Ttc18), mRNA.					
Mus musculus	RefSeq	ILMN_219362	ILMN_219362	D10WSU102E	NM_026579.2	NM_026579.2		28109	46195802	NM_026579.2	D10Wsu102e	NP_080855.1	ILMN_2707694	004860735	S	3361	GCGTCATATTGAAGGAAGTTGTAGGAGTTGAAGGGGGTGTCGGGGTGCCA	10	+	82831464-82831513	10qC1	Mus musculus DNA segment, Chr 10, Wayne State University 102, expressed (D10Wsu102e), mRNA.				C430041I18Rik; AI747614	C430041I18Rik; AI747614
Mus musculus	Riken	ILMN_205706	ILMN_205706	B430302L04RIK	ri|B430302L04|PX00071J07|AK046653|1552					AK046653	B430302L04Rik		ILMN_2574612	000620717	S	1230	AAGGTTCTTTCCTGTTGGATGCCTGGCCAGACTCACGGAGAGGAGGAGAG										
Mus musculus	RefSeq	ILMN_197024	ILMN_197024	LOC240888	XM_136361.2	XM_136361.2			38073554	XM_136361.2	LOC240888		ILMN_1255506	005900082	S	2249	AGAGCGCGGGTGTCCAGACGCTGATGCTCCCTGATGGAAGATGTAGAGGA										
Mus musculus	RefSeq	ILMN_198674	ILMN_198674	LOC331539	XM_284747.2	XM_284747.2			38086778	XM_284747.2	LOC331539		ILMN_1257539	004060411	S	729	TGGTGGATATGGTGGCAGCCAGTACTTTGCTAAACCACGGAACCAAGGTG										
Mus musculus	MEEBO	ILMN_213501	ILMN_213501	CDC25C	scl51540.13.1_28	NM_009860.1			6753361	NM_009860.1	Cdc25c		ILMN_2637704	003830328	S	1833	GCAGGGACAGATTGCCCTCCTGGTGAAGGGTGCGAGCCCACAATAGTGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through M phase, the part of the mitotic cell cycle during which mitosis takes place [goid 87] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_185550	ILMN_185550	A330080J22RIK	scl36594.17_27				31341007	NM_178667	A330080J22Rik		ILMN_2591651	004590228	S	1270	GTCAGGCAAATGCTCTCTGGAGGATCTGAAAATCGCAAAATCCCTGGTTC										
Mus musculus	RefSeq	ILMN_184146	ILMN_253650	D3ERTD751E	NM_028667.3	NM_028667.3		73852	153281115	NM_028667.3	D3Ertd751e	NP_082943.2	ILMN_2416238	004390201	S	3482	AAAAGATCTGTGTCTATTATTTATATTAGTATTATTAACTGTGAAAATCA				3qB	Mus musculus DNA segment, Chr 3, ERATO Doi 751, expressed (D3Ertd751e), transcript variant 1, mRNA.				2810009O15Rik; 4930415G15Rik	2810009O15Rik; 4930415G15Rik
Mus musculus	RefSeq	ILMN_184146	ILMN_253650	D3ERTD751E	NM_028667.3	NM_028667.3		73852	153281115	NM_028667.3	D3Ertd751e	NP_082943.2	ILMN_2690349	000160554	S	91	CTAGAACGCAGGAGCAACTGGGCAGAGCCTAAGAGGGAGCTCACTGCTCA				3qB	Mus musculus DNA segment, Chr 3, ERATO Doi 751, expressed (D3Ertd751e), transcript variant 1, mRNA.				2810009O15Rik; 4930415G15Rik	2810009O15Rik; 4930415G15Rik
Mus musculus	RefSeq	ILMN_224361	ILMN_224361	CCT6A	NM_009838.1	NM_009838.1		12466	6753323	NM_009838.1	Cct6a	NP_033968.1	ILMN_2962840	000360301	S	1562	AGCTGCTACACTCCTGTACTGTGATCGCCACCAACATTCTCCTGGTCGAC				5qG1.3	Mus musculus chaperonin containing Tcp1, subunit 6a (zeta) (Cct6a), mRNA.	A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cctz-1; Cct6	Cctz-1; Cct6
Mus musculus	RefSeq	ILMN_194495	ILMN_229585	D14ABB1E	XM_897700.2	XM_897700.2		218850	94396850	XM_897700.2	D14Abb1e	XP_902793.1	ILMN_1256108	001070431	S	3960	AGGGTATGAGATTCGTTTCCAACTCCTTTTGTTTCTGGAGAAGACCCTGC	14	+	26309441-26309490		PREDICTED: Mus musculus DNA segment, Chr 14, Abbott 1 expressed, transcript variant 5 (D14Abb1e), mRNA.					
Mus musculus	RefSeq	ILMN_217769	ILMN_255351	NANOG	NM_028016.1	NM_028016.1		71950	110625917	NM_028016.1	Nanog	NP_082292.1	ILMN_2706623	005090661	S	2105	GATGTTTATATTTGACTGTACCATGATGAACCGATGCCAGCTGGACTAGT	6	+	122664570-122664619	6qF2	Mus musculus Nanog homeobox (Nanog), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of a stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells [goid 48863] [evidence IMP]; Any process that stops, prevents or reduces the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 10454] [evidence IDA]; Any process that stops, prevents or reduces the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 10454] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types [goid 17145] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that restricts, stops or prevents a cell from specifying into an endoderm cell [goid 42664] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; The process by which a cell becomes committed to become part of the mesoderm [goid 1710] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones [goid 8406] [pmid 15108323] [evidence IEP]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [pmid 15108323] [evidence IEP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ENK; 2410002E02Rik; ecat4	ENK; 2410002E02Rik; ecat4
Mus musculus	RefSeq	ILMN_223208	ILMN_223208	BC021381	NM_145382.3	NM_145382.3		212483	110626028	NM_145382.3	BC021381	NP_663357.2	ILMN_2760765	001240575	S	4049	GACCAACCAAAAGCTGAATGGACGCCATGCTGTGCTGGGGCCTGTGAGGA	13	-	55640919-55640968	13qB1	Mus musculus cDNA sequence BC021381 (BC021381), mRNA.				MGC29235; MGC38018; MGC39032	MGC29235; MGC38018; MGC39032
Mus musculus	RefSeq	ILMN_229628	ILMN_229628	STK22S1	NM_001077591.1	NM_001077591.1		22116	117938290	NM_001077591.1	Stk22s1	NP_001071059.1	ILMN_3138175	007210543	A	1295	GGGAGCTGACCATGTCTTGAACTTGGATCGGTCTGCCCAAGGCCCCTGTG	7	+	52209795-52209844	7qB4	Mus musculus serine/threonine kinase 22 substrate 1 (Stk22s1), transcript variant 2, mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC148222; Tssks1	MGC148222; Tssks1
Mus musculus	RefSeq	ILMN_188124	ILMN_233677	SNRPF	XM_892627.2	XM_892627.2		69878	94388566	XM_892627.2	Snrpf	XP_897720.1	ILMN_2449985	006510070	S	275	CGGTGGTCGCGATGAGTCTACCCCTCAACCCCAAGCCCTTTCTCAATGGG	10	-	93050832-93050868:93052284-93052296	10qC2	PREDICTED: Mus musculus small nuclear ribonucleoprotein polypeptide F (Snrpf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213290	ILMN_213290	FTSJ2	NM_026510.1	NM_026510.1		68017	13386001	NM_026510.1	Ftsj2	NP_080786.1	ILMN_2795174	004610458	S	713	AGAGTCTTCGGAGGTGTACCTGTTAGCCACCCAGTACCGTGGGGGGAAGG	5	-	140804308-140804357	5qG2	Mus musculus FtsJ homolog 2 (E. coli) (Ftsj2), mRNA.		The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		2310037B18Rik	2310037B18Rik
Mus musculus	RefSeq	ILMN_257105	ILMN_257105	ZXDA	NR_003292.1	NR_003292.1		668171	125628683	NR_003292.1	Zxda		ILMN_2811263	007050673	S	6445	TCTCAGCACTTGGGGGGCAGAAGCAGGCAGATTTCTGAGTTTGAGGCCAG	X	-	92037134-92037183	XqC3	Mus musculus zinc finger, X-linked, duplicated A (Zxda), non-coding RNA.				AW413531; 4933406P09Rik	AW413531; 4933406P09Rik
Mus musculus	RefSeq	ILMN_196137	ILMN_236284	SLC30A3	NM_011773.2	NM_011773.2		22784	118130059	NM_011773.2	Slc30a3	NP_035903.1	ILMN_2692938	004280279	S	1013	TCCTCATGGAAGGCGCCCCTCGGAGTGTGGAATTTGAACCCGTAAGGGAC	5	-	31390426-31390464:31390678-31390688	5qB1	Mus musculus solute carrier family 30 (zinc transporter), member 3 (Slc30a3), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	Znt3	Znt3
Mus musculus	RefSeq	ILMN_211552	ILMN_315534	TDRD9	XM_001475772.1	XM_001475772.1		74691	149263535	XM_001475772.1	Tdrd9	XP_001475822.1	ILMN_2617042	002260341	S	3913	CGAGGAGACAAGATCCAGAGCGTGTTTGTATGCTATCCTGTCACAGTGGT	12	+	113306720-113306769	12qF1	PREDICTED: Mus musculus tudor domain containing 9 (Tdrd9), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	Riken	ILMN_203230	ILMN_203230	ASAH2	ri|C030011O21|PX00074O17|AK047692|1538					AK047692	Asah2		ILMN_1214560	005130735	S	247	CGGACCGGGTTGGCCTCTCCAAAAGCCACTTCTCCTAACTCTTATCAAGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine [goid 17040] [evidence IDA]		
Mus musculus	MEEBO	ILMN_219767	ILMN_219767	LRRC16	scl44196.14_393	NM_177807.2			31342974	NM_177807.2	Lrrc16		ILMN_1224957	007510300	S	2112	TGCCCGTGCAGTCCACTATCGTAGTTGGGAGTTTTGTACATCAGTCAGTT										
Mus musculus	RefSeq	ILMN_218987	ILMN_218987	AKT1	NM_009652.2	NM_009652.2		11651	133891722	NM_009652.2	Akt1	NP_033782.1	ILMN_1213935	004920739	S	1922	CCTGGGGTTTTTCTTAATTTATTTCATCCAGTTTGAGACCACACATGTGG	12	-	113892664-113892713	12qF1	Mus musculus thymoma viral proto-oncogene 1 (Akt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32436] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat [goid 32094] [evidence IDA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process of apoptosis in activated T cells [goid 6924] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IGI]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence ISO]; Any process that reduces cell size [goid 45792] [evidence ISO]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IMP]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IDA]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IDA]; Any process that modulates the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45884] [evidence IDA]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	PKBalpha; Akt; PKB; PKB/Akt	PKBalpha; Akt; PKB; PKB/Akt
Mus musculus	Riken	ILMN_206396	ILMN_206396	D230046H12RIK	ri|D230046H12|PX00190G08|AK084437|2867					AK084437	D230046H12Rik		ILMN_1249135	002940220	S	2719	CTCAGCAAAGGTCTACATGCCGCAGCCCAGAAGGCAAACACTCCAGTCCC										
Mus musculus	RefSeq	ILMN_210330	ILMN_210330	PODXL	NM_013723.2	NM_013723.2		27205	34328218	NM_013723.2	Podxl	NP_038751.2	ILMN_2604494	002190397	S	5152	CTTGCCCAGGAGATTGGGGGAGTGTATGTTGTAGTGGACAGGGGTCTAAA	6	-	31469595-31469644	6qA3.3	Mus musculus podocalyxin-like (Podxl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]		Ly102; Pclp1; AW121214; PC	Ly102; Pclp1; AW121214; PC
Mus musculus	Riken	ILMN_201861	ILMN_201861	GFM	ri|6330405J24|PX00008I07|AK018125|1888					AK018125	Gfm		ILMN_1217330	004050315	S	1339	GGCATGGGCCCACATGGGAGTGTGGATAGAACAGGATCCCATAGGAACAG										
Mus musculus	RefSeq	ILMN_215888	ILMN_238946	PIGC	NM_001039045.1	NM_001039045.1		67292	84794577	NM_001039045.1	Pigc	NP_001034134.1	ILMN_1241054	003930075	S	1871	CTGGAGGGTGAGTTCATCTCAGGCAGTTAGGAAACCAGAGGTGACATTTA	1	+	163902149-163902198	1qH2.1	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class C (Pigc), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol [goid 17176] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	3110030E07Rik; AW212108	3110030E07Rik; AW212108
Mus musculus	RefSeq	ILMN_195295	ILMN_236331	OTUD7B	NM_001025613.1	NM_001025613.1		229603	71043958	NM_001025613.1	Otud7b	NP_001020784.1	ILMN_2514305	000010048	S	1687	CTGCTGCATAGCTATATGAATGTGAAGTGGATCCCACTGTCTTCTGATTC	3	+	95957362-95957411	3qF2.1	Mus musculus OTU domain containing 7B (Otud7b), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence IDA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IDA]	Za20d1; AI462125; 2900060B22Rik; Trabid2; CEZANNE; 4930463P07Rik	Za20d1; AI462125; 2900060B22Rik; Trabid2; CEZANNE; 4930463P07Rik
Mus musculus	RefSeq	ILMN_236331	ILMN_236331	OTUD7B	NM_001025613.1	NM_001025613.1		229603	71043958	NM_001025613.1	Otud7b	NP_001020784.1	ILMN_3046773	006220152	I	295	GCACCAGCCTGTGGAAAAATCGCAAGACTATGGCGGGGTTCTGCTCAAAA	3	+	95912635-95912684	3qF2.1	Mus musculus OTU domain containing 7B (Otud7b), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence IDA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IDA]	Za20d1; AI462125; 2900060B22Rik; Trabid2; CEZANNE; 4930463P07Rik	Za20d1; AI462125; 2900060B22Rik; Trabid2; CEZANNE; 4930463P07Rik
Mus musculus	RefSeq	ILMN_236331	ILMN_236331	OTUD7B	NM_001025613.1	NM_001025613.1		229603	71043958	NM_001025613.1	Otud7b	NP_001020784.1	ILMN_3122383	003870709	A	7587	CCTGTTAACCTAATCCTCAACTGCAGCCCCTTTGTGCTTCTGGTTAGGCG	3	+	95964538-95964587	3qF2.1	Mus musculus OTU domain containing 7B (Otud7b), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence IDA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IDA]	Za20d1; AI462125; 2900060B22Rik; Trabid2; CEZANNE; 4930463P07Rik	Za20d1; AI462125; 2900060B22Rik; Trabid2; CEZANNE; 4930463P07Rik
Mus musculus	RefSeq	ILMN_200953	ILMN_200953	LOC382279	XM_356397.1	XM_356397.1			38087323	XM_356397.1	LOC382279		ILMN_1213760	006220561	S	51	CTGGCAGTCTCCAGAGATTGAGAGAAGTCCGAGCAGTCAGGATGTTACCA										
Mus musculus	RefSeq	ILMN_187019	ILMN_237435	COL23A1	NM_153393.1	NM_153393.1		237759	23510252	NM_153393.1	Col23a1	NP_700442.1	ILMN_2650447	005890072	S	2649	GGTACGGACACCATGAACCTGAAGGCTGATCCCCCAGCAAGCCTGAGCAA	11	+	51394411-51394460	11qB1.3	Mus musculus procollagen, type XXIII, alpha 1 (Col23a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AI429655; 2810458L13Rik	AI429655; 2810458L13Rik
Mus musculus	RefSeq	ILMN_212902	ILMN_212902	PKDREJ	NM_011105.2	NM_011105.2		18766	115583674	NM_011105.2	Pkdrej	NP_035235.2	ILMN_2631478	003180392	S	6278	TCGTCGACATGCTCTATGGGCAGCCGGAGAAGAATACTCGCCGGTTCCTG	15	-	85645836-85645885	15qE2	Mus musculus polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly, sea urchin homolog)-like (Pkdrej), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200262	ILMN_256304	LOC669658	XM_976371.1	XM_976371.1		669658	94405661	XM_976371.1	LOC669658	XP_981465.1	ILMN_1213448	006620136	S	2117	CTACGCGGACCACACTGGCGTAGTAAGAGATAGCATGGCAAAGCTAAGAG					PREDICTED: Mus musculus similar to melanoma antigen (LOC669658), mRNA.					
Mus musculus	RefSeq	ILMN_201333	ILMN_201333	LOC382464	XM_356520.1	XM_356520.1			38091013	XM_356520.1	LOC382464		ILMN_2541927	006980521	S	350	CAGAAGCACGAGGCTGTCAACTGAACTCTCATCCGTGGTGCCTATCGCCC										
Mus musculus	RefSeq	ILMN_208814	ILMN_243017	STAT3	NM_213659.2	NM_213659.2		20848	76253927	NM_213659.2	Stat3	NP_998824.1	ILMN_2698046	006660176	S	3006	CCTTGCTAATATCCACATAGAAGCTAGGACTAAGCCCAGAGGTTCCTCTT	11	-	100759790-100759821:100759922-100759939	11qD	Mus musculus signal transducer and activator of transcription 3 (Stat3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a photoreceptor cell, as found in the eye, the primary visual organ of most organisms [goid 1754] [evidence IMP]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence NAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	AW109958; 1110034C02Rik; Aprf	AW109958; 1110034C02Rik; Aprf
Mus musculus	RefSeq	ILMN_208814	ILMN_243017	STAT3	NM_213659.2	NM_213659.2		20848	76253927	NM_213659.2	Stat3	NP_998824.1	ILMN_2589790	005310360	S	2901	CGGGGTTGGTTGTTAGACAAGTGCCTCCTGGTGCCCATGGCATCCTGTTG	11	-	100759995-100760015:100759931-100759959	11qD	Mus musculus signal transducer and activator of transcription 3 (Stat3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a photoreceptor cell, as found in the eye, the primary visual organ of most organisms [goid 1754] [evidence IMP]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence NAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	AW109958; 1110034C02Rik; Aprf	AW109958; 1110034C02Rik; Aprf
Mus musculus	RefSeq	ILMN_198923	ILMN_198923	LOC235300	XM_134834.3	XM_134834.3			38089795	XM_134834.3	LOC235300		ILMN_1258001	004570647	S	474	CGGGGGATGTGGTGGACTTCCTCTTTGTGGCTCTGTTCACTGGTGTGAGG										
Mus musculus	RefSeq	ILMN_212372	ILMN_212372	GALNT1	NM_013814.2	NM_013814.2		14423	34328220	NM_013814.2	Galnt1	NP_038842.2	ILMN_2625681	001450682	S	1862	TAGAGACTGCACTGGAAGCCGGTCCCAGCAGTGGCTTCTTCGAAACGTCA	18	+	24443301-24443350	18qA2	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (Galnt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212372	ILMN_212372	GALNT1	NM_013814.2	NM_013814.2		14423	34328220	NM_013814.2	Galnt1	NP_038842.2	ILMN_2625680	000990593	S	1861	TTAGAGACTGCACTGGAAGCCGGTCCCAGCAGTGGCTTCTTCGAAACGTC	18	+	24443300-24443349	18qA2	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (Galnt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212372	ILMN_212372	GALNT1	NM_013814.2	NM_013814.2		14423	34328220	NM_013814.2	Galnt1	NP_038842.2	ILMN_2650439	001980392	S	2265	GCACGTCAGCCGTTTCTGCTGAATGTGCCTTGTGAAGAAGAGTTTTCCTG	18	+	24443704-24443753	18qA2	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (Galnt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212372	ILMN_212372	GALNT1	NM_013814.2	NM_013814.2		14423	34328220	NM_013814.2	Galnt1	NP_038842.2	ILMN_2625687	006480026	S	1876	GGAAGCCGGTCCCAGCAGTGGCTTCTTCGAAACGTCACCCTTCCAGAAAT	18	+	24443315-24443357:24443358-24443364	18qA2	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (Galnt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	Riken	ILMN_206460	ILMN_206460	D230004N23RIK	ri|D230004N23|PX00187B08|AK084171|2663					AK084171	D230004N23Rik		ILMN_1231536	002970707	S	2517	TAAGGTAAAGGAAGCAGGTGAGAAGGCGCAGAGGGTAAAGGCCAGGGACC										
Mus musculus	RefSeq	ILMN_214040	ILMN_214040	CCDC104	NM_025740.3	NM_025740.3		216618	146134963	NM_025740.3	Ccdc104	NP_080016.1	ILMN_2643580	000290152	S	1145	GAAACTTAAAGAAGAAGTTATTAATAAGTAATATGAAAAATTAGCAAAAC				11qA3.3	Mus musculus coiled-coil domain containing 104 (Ccdc104), mRNA.				RP23-393O10.2; 2300003H10; 4931428D14Rik	RP23-393O10.2; 2300003H10; 4931428D14Rik
Mus musculus	RefSeq	ILMN_215193	ILMN_215193	SULT1E1	NM_023135.1	NM_023135.1		20860	12963514	NM_023135.1	Sult1e1	NP_075624.1	ILMN_1216300	004670041	S	1004	CCACTTCCTTGTGTCTGAAATTAGAGTAGTCTGAAATTTATCCTTCAGTT	5	-	88005182-88005231	5qE1	Mus musculus sulfotransferase family 1E, member 1 (Sult1e1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IMP]; The chemical reactions and pathways involving estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 8210] [evidence IMP]	Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + estrone = adenosine 3',5'-bisphosphate + estrone 3-sulfate [goid 4304] [evidence IEA]	Ste	Ste
Mus musculus	RefSeq	ILMN_226443	ILMN_226443	BC030396	NM_173862.1	NM_173862.1		239463	33239367	NM_173862.1	BC030396	NP_776287.1	ILMN_2854790	005890047	S	923	CCGGATCATACAGGTGAGTACTGGTTTCATCTGCTGTCCAGGCTTCCGGG	15	+	57826891-57826897:57826898-57826940	15qD1	Mus musculus cDNA sequence BC030396 (BC030396), mRNA.				MGC40696	MGC40696
Mus musculus	RefSeq	ILMN_259161	ILMN_259161	GM614	NM_001033362.1	NM_001033362.1		245536	85701851	NM_001033362.1	Gm614	NP_001028534.1	ILMN_2784703	003120168	S	651	AGACGGACCACCTTCCACCCGCAGACCATTCTACAAGACTAGAGCAGACT	X	-	97464142-97464191	XqD	Mus musculus gene model 614, (NCBI) (Gm614), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	RP23-440J15.1; Il2rg	RP23-440J15.1; Il2rg
Mus musculus	RefSeq	ILMN_220141	ILMN_220141	DOLPP1	NM_020329.3	NM_020329.3		57170	146135033	NM_020329.3	Dolpp1	NP_065062.1	ILMN_2723338	006450541	S	1875	GCTTTCCTTTGTGTTTGTTAAAGGCCGTGTCCAAGCCCCTCAGATGCCAG				2qB	Mus musculus dolichyl pyrophosphate phosphatase 1 (Dolpp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: dolichyl diphosphate + H2O = dolichyl phosphate + phosphate [goid 47874] [evidence IDA]	AB030189; LSFR2; 0610011H20Rik	AB030189; LSFR2; 0610011H20Rik
Mus musculus	RefSeq	ILMN_220141	ILMN_220141	DOLPP1	NM_020329.3	NM_020329.3		57170	146135033	NM_020329.3	Dolpp1	NP_065062.1	ILMN_2718090	003710189	S	546	GGCCGTCGCCTGGTTCATCATCACGCAGGAAATCCTCACTCCGTTGTTCC				2qB	Mus musculus dolichyl pyrophosphate phosphatase 1 (Dolpp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: dolichyl diphosphate + H2O = dolichyl phosphate + phosphate [goid 47874] [evidence IDA]	AB030189; LSFR2; 0610011H20Rik	AB030189; LSFR2; 0610011H20Rik
Mus musculus	RefSeq	ILMN_192871	ILMN_311983	1700026J12RIK	XR_033917.1	XR_033917.1		73255	149267890	XR_033917.1	1700026J12Rik		ILMN_1230603	007570246	S	1094	GACTAGAGGCTAGTTTGTAGACGTATTACTTTGTAAAAAGTGTCAACTCC				16qB5	PREDICTED: Mus musculus RIKEN cDNA 1700026J12 gene (1700026J12Rik), misc RNA.		Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]			
Mus musculus	RefSeq	ILMN_215240	ILMN_215240	KRTAP13-1	NM_183189.1	NM_183189.1		268905	34147241	NM_183189.1	Krtap13-1	NP_899012.1	ILMN_2657135	001850347	S	638	TGATTGCCAATTCTTCACTTTCTCTCTAACCTCAGATATTGGCTGGTGGG	16	+	88729744-88729793	16qC3.3	Mus musculus keratin associated protein 13-1 (Krtap13-1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			MGC41371; KAP13.1; AA589563	MGC41371; KAP13.1; AA589563
Mus musculus	RefSeq	ILMN_196817	ILMN_196817	LOC237553	XM_137260.1	XM_137260.1			20865747	XM_137260.1	LOC237553		ILMN_1236210	006960491	S	1101	GCGAACAAAATGGCATGTAGTACTGGGGCCTTCTCCGCTGTATGGTCAGC										
Mus musculus	RefSeq	ILMN_209927	ILMN_209927	EIF2B1	NM_145371.3	NM_145371.3		209354	142384946	NM_145371.3	Eif2b1	NP_663346.1	ILMN_1215242	002510079	S	895	TGTTTACGGACCTGGGTGTGTTGACGCCATCTGCTGTAAGCGATGAGCTC	5	-	125021216-125021265	5qF	Mus musculus eukaryotic translation initiation factor 2B, subunit 1 (alpha) (Eif2b1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]	26kDa; D5Ertd406e; MGC6458; EIF2BA; EIF2B	26kDa; D5Ertd406e; MGC6458; EIF2BA; EIF2B
Mus musculus	RefSeq	ILMN_188683	ILMN_188683	WBP1	NM_016757.2	NM_016757.2		22377	145046241	NM_016757.2	Wbp1	NP_058037.2	ILMN_2454788	001240593	S	403	CCTCTGTGAGACTGGTCATTGCTGTGGGGAGACTGGCTGCTGCACCTACT	6	-	83070193-83070242	6qC3	Mus musculus WW domain binding protein 1 (Wbp1), transcript variant 1, mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a WW domain of a protein, a small module composed of 40 amino acids and plays a role in mediating protein-protein interactions via proline-rich regions [goid 50699] [evidence IPI]	AI255152	AI255152
Mus musculus	RefSeq	ILMN_219311	ILMN_219311	MGL2	NM_145137.2	NM_145137.2		216864	115311550	NM_145137.2	Mgl2	NP_660119.1	ILMN_2707319	004150497	S	735	GAGTCTGAGAAGTCGTGGCCTGAAGCTGACAAGTACTGCCGGCTGGAGAA	11	+	69949083-69949128:69949093-69949096	11qB3	Mus musculus macrophage galactose N-acetyl-galactosamine specific lectin 2 (Mgl2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [evidence IDA]	MGC124077; MGC123939; MGC123660	MGC124077; MGC123939; MGC123660
Mus musculus	MEEBO	ILMN_194639	ILMN_194639	1700105P06RIK	scl53545.1.614_23				28525772	XM_129071	1700105P06Rik		ILMN_2524503	007510438	S	2808	CTGGGCCACAGGACACCTGGGTCTGTATCTGTTTCTGTAGGTTAGCACAG										
Mus musculus	MEEBO	ILMN_194639	ILMN_194639	1700105P06RIK	scl53545.1.614_23				28525772	XM_129071	1700105P06Rik		ILMN_1248659	007650411	S	3112	CCAGACTGCATTAACTTGGTATTTCTGGTGTCCTGCATAGGGCTCGGCAC										
Mus musculus	RefSeq	ILMN_235320	ILMN_235320	WFDC16	NM_001012723.1	NM_001012723.1		277345	84794600	NM_001012723.1	Wfdc16	NP_001012741.1	ILMN_3162281	003850546	S	425	CGTTACAAGCCACTCGGAAAGTGTTGGAAGACCAACCTCCTGTTGGACCG	2	-	164460854-164460903	2qH3	Mus musculus WAP four-disulfide core domain 16 (Wfdc16), mRNA.				WAP16; BC043944	WAP16; BC043944
Mus musculus	RefSeq	ILMN_214511	ILMN_214511	BCKDK	NM_009739.3	NM_009739.3		12041	88853585	NM_009739.3	Bckdk	NP_033869.1	ILMN_1249301	003890113	S	1431	TGCAGGGCATTGGCACGGATGTCTACCTACGGCTCCGCCACATTGATGGT	7	+	135051752-135051801	7qF3	Mus musculus branched chain ketoacid dehydrogenase kinase (Bckdk), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The posttranslational phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine) [goid 18106] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine [goid 4673] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) = ADP + 3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) phosphate [goid 47323] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	AI327402	AI327402
Mus musculus	RefSeq	ILMN_214511	ILMN_214511	BCKDK	NM_009739.3	NM_009739.3		12041	88853585	NM_009739.3	Bckdk	NP_033869.1	ILMN_2648746	007400050	S	1127	CACCTAGACACTCCCTACAATGTCCCAGATGTGGTCATCACCATCGCCAA	7	+	135050972-135051021	7qF3	Mus musculus branched chain ketoacid dehydrogenase kinase (Bckdk), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The posttranslational phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine) [goid 18106] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine [goid 4673] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) = ADP + 3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) phosphate [goid 47323] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	AI327402	AI327402
Mus musculus	RefSeq	ILMN_216610	ILMN_216610	RAB3A	NM_009001.3	NM_009001.3		19339	111186466	NM_009001.3	Rab3a	NP_033027.1	ILMN_2991912	000610154	S	1355	GCTTGCCTGGGCCTTCTGCCTTATACTTTGGGATAAATGGGGTGTAGGGG				8qB3.3	Mus musculus RAB3A, member RAS oncogene family (Rab3a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electrical stimulus [goid 51602] [evidence IMP]; The series of events required for an organism to receive a touch stimulus, convert it to a molecular signal, and recognize and characterize the signal. The perception of touch in animals is mediated by mechanoreceptors in the skin and mucous membranes and is the sense by which contact with objects gives evidence as to certain of their qualities. Different types of touch can be perceived (for example, light, coarse, pressure and tickling) and the stimulus may be external or internal (e.g. the feeling of a full stomach) [goid 50975] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane [goid 31630] [evidence IMP]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IMP]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence IMP]; The process by which a neuronal cell maintains the organization and the arrangement of proteins at the active zone to ensure the fusion and dock of vesicles and the release of neurotransmitters [goid 48790] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; A organ system process carried out by any of the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange [goid 3016] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199591	ILMN_199591	LOC383700	XM_357195.1	XM_357195.1			38074836	XM_357195.1	LOC383700		ILMN_2535772	005720768	S	251	CATGCCATTTCTCCAACGTATTGGCGCAGAGCATCCAGGCGAGCCGTTAC										
Mus musculus	RefSeq	ILMN_200069	ILMN_200069	LOC385681	XM_358910.1	XM_358910.1			38080206	XM_358910.1	LOC385681		ILMN_1250272	001820154	S	1089	CAGGCATGGTGCTGTCAAGTCGTTGCCGGGTCTGAGTTTGGATAACATGG										
Mus musculus	RefSeq	ILMN_213213	ILMN_213213	TESSP3	NM_199471.1	NM_199471.1		272643	41054965	NM_199471.1	Tessp3	NP_955765.1	ILMN_2951193	001070465	S	1722	AGAGGGCCAGCTTGCCTGCTAGGTGGAGAACCATGACTCCATGATCTTGG	9	+	110733738-110733787	9qF3	Mus musculus testis serine protease 3 (Tessp3), mRNA.				Gm661	Gm661
Mus musculus	RefSeq	ILMN_223760	ILMN_223760	DPP8	NM_028906.2	NM_028906.2		74388	31542570	NM_028906.2	Dpp8	NP_083182.2	ILMN_1215849	000070196	S	4606	GGGTTTGCCAGCTGTGTGTCTATGTTGTATGATAGACCCCACACTTTTCT	9	+	64922275-64922324	9qC	Mus musculus dipeptidylpeptidase 8 (Dpp8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	2310004I03Rik; 4932434F09Rik; AI666706	2310004I03Rik; 4932434F09Rik; AI666706
Mus musculus	RefSeq	ILMN_210836	ILMN_210836	OLFR192	NM_207549.1	NM_207549.1		404309	46430557	NM_207549.1	Olfr192	NP_997432.1	ILMN_2609698	002760458	S	616	GTCTTCACGGTTGTGATTGTTCTTGTGTCCTATACACTAGTGCTGTTTAC	16	-	59098151-59098200	16qC1.3	Mus musculus olfactory receptor 192 (Olfr192), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_222294	ILMN_222294	SCARA5	NM_028903.1	NM_028903.1		71145	22296588	NM_028903.1	Scara5	NP_083179.1	ILMN_3008068	000160377	S	3362	CCCTGTACAAGCGTAGCACTCCTATTACATTGCCCATTGCTCAGCACGTC	14	+	66383255-66383304	14qD1	Mus musculus scavenger receptor class A, member 5 (putative) (Scara5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	4932433F15Rik; 4933425F03Rik; AV278087	4932433F15Rik; 4933425F03Rik; AV278087
Mus musculus	RefSeq	ILMN_184210	ILMN_227462	NCOA2	NM_001077695.1	NM_001077695.1		17978	118026943	NM_001077695.1	Ncoa2	NP_001071163.1	ILMN_1259910	001050470	S	4497	ACATGCCGCCAGTTCTCCCAGGACATAGCAGCAGACAGTCGGGCCCTGGG	1	-	13132699-13132748	1qA3	Mus musculus nuclear receptor coactivator 2 (Ncoa2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any series of molecular signals generated as a consequence of a steroid hormone binding to its receptor [goid 30518] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IGI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA];  [goid 30375] [evidence IDA];  [goid 30374] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]	TIF2; TIF-2; SRC-2; 9530095N19; GRIP-1; Grip1; D1Ertd433e	TIF2; TIF-2; SRC-2; 9530095N19; GRIP-1; Grip1; D1Ertd433e
Mus musculus	MEEBO	ILMN_223918	ILMN_223918	OLFR421	scl14317.1.1_213				22129400	NM_146720	Olfr421		ILMN_2771458	001940719	S	778	CGATTCTCTGCCACCTATACACCATTCTGAGACAACACCATTGCTCTTAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185147	ILMN_185147	SCL0002297.1_21	scl0002297.1_21	BC049858.1			29436829	BC049858.1	scl0002297.1_21		ILMN_2424565	006760609	S	7	TGCCACATCAGCCACCCACGAGCACTTGGAAGGGCCAGCAACTAATGATC										
Mus musculus	RefSeq	ILMN_190523	ILMN_312073	LOC328277	XR_031185.1	XR_031185.1		328277	149264472	XR_031185.1	LOC328277		ILMN_2470892	003170475	S	363	GGCTTGCTTAAATTCCTTTGTCTGAATCGGAGTATTTTGGTCATATTCAT				13qB3	PREDICTED: Mus musculus hypothetical protein LOC328277 (LOC328277), misc RNA.					
Mus musculus	RefSeq	ILMN_213019	ILMN_213019	PPM1M	NM_198931.2	NM_198931.2		67905	141801846	NM_198931.2	Ppm1m	NP_945149.1	ILMN_1251484	001110243	S	67	GGTGTGCACATCCCCGCTAACCTTCTTCTTGTCTTCAACCTTGACAGCAT	9	-	106101157-106101206	9qF1	Mus musculus protein phosphatase 1M (Ppm1m), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the reaction: phospho-(DNA-directed RNA polymerase) + H2O = (DNA-directed RNA polymerase) + phosphate [goid 8420] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2810423O19Rik; AW610647; PP2Ceta; C77250	2810423O19Rik; AW610647; PP2Ceta; C77250
Mus musculus	RefSeq	ILMN_212216	ILMN_212216	SFXN3	NM_053197.2	NM_053197.2		94280	31981487	NM_053197.2	Sfxn3	NP_444427.1	ILMN_1217021	005820097	S	601	TGCTATTGTGAATTACTCTAATCGCAGCGGCGATGCTCCCATCACTGTGC	19	+	45124766-45124815	19qC3	Mus musculus sideroflexin 3 (Sfxn3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212216	ILMN_212216	SFXN3	NM_053197.2	NM_053197.2		94280	31981487	NM_053197.2	Sfxn3	NP_444427.1	ILMN_2963704	005290762	S	2462	TTCTCTGGGTAGCCCTGGCTGTCCTGAAACTCAGAGATCTGCTTGCCTAT	19	+	45130467-45130516	19qC3	Mus musculus sideroflexin 3 (Sfxn3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212216	ILMN_212216	SFXN3	NM_053197.2	NM_053197.2		94280	31981487	NM_053197.2	Sfxn3	NP_444427.1	ILMN_2963700	004540050	S	2522	GCTGGGATTAAAAGGCATGTGCCACCATTGCCAGCAGCCCGTCTCTTTCT	19	+	45130527-45130576	19qC3	Mus musculus sideroflexin 3 (Sfxn3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210395	ILMN_233313	KLHL30	NM_027551.2	NM_027551.2		70788	141802195	NM_027551.2	Klhl30	NP_081827.1	ILMN_2605201	001580168	S	2738	TTCGGGGTATCTCACACCTGATCCCTCACCCTGGTCTGCAGGGATTCTGG	1	+	93258699-93258748	1qD	Mus musculus kelch-like 30 (Drosophila) (Klhl30), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC143856; 4631423F02Rik	MGC143856; 4631423F02Rik
Mus musculus	MEEBO	ILMN_189047	ILMN_189047	ADAMTS9	scl28665.23.1_62						Adamts9		ILMN_1257724	000380554	S	20	GATTAGGAAAACCCTGACAGTATTCCCCAACTCCACAGAAATGCCAGAGC						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence ISO]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISO]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of melanocyte differentiation [goid 45636] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]		
Mus musculus	Riken	ILMN_205691	ILMN_205691	STK33	ri|A430102F11|PX00064N16|AK040480|2161					AK040480	Stk33		ILMN_1260423	002470066	S	1582	GGGAGGCAGAGAGGCAAGAGAATCCCAGAGACATGGTAGCTAATCCGTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	Riken	ILMN_201700	ILMN_201700	1700020N17RIK	ri|1700020N17|ZX00037B11|AK006181|718					AK006181	1700020N17Rik		ILMN_1213106	002760477	S	240	GGCTGGGAACTCCCATGGGTCTGATAAGAGCTGGAGCCCAATCCTTCTCC										
Mus musculus	Riken	ILMN_201726	ILMN_201726	1810047K05RIK	ri|1810047K05|ZX00043E03|AK007812|746					AK007812	1810047K05Rik		ILMN_1232635	000160600	S	489	CCGTCGCGCCCGTCTGGAGGTTAAGCCAAGGGGAATATCGAACCTGAAGT										
Mus musculus	RefSeq	ILMN_247707	ILMN_319582	EG381806	NR_003624.1	NR_003624.1		381806	153792341	NR_003624.1	EG381806		ILMN_3161901	000380086	S	14124	CTGGGCAGAGAGTGATCACTTAGGCAACTAGACAATTAGGTCCACTCCTG					Mus musculus predicted gene, EG381806 (EG381806) on chromosome 6.					
Mus musculus	RefSeq	ILMN_200668	ILMN_319582	EG381806	NR_003624.1	NR_003624.1		381806	153792341	NR_003624.1	EG381806		ILMN_1217352	000870053	S	3060	CTACACCCCCTGAATGAGTTGGTGAGTCTTTAACCTGTGGGTATTGGTGG					Mus musculus predicted gene, EG381806 (EG381806) on chromosome 6.					
Mus musculus	RefSeq	ILMN_194647	ILMN_254533	INTS7	NM_178632.4	NM_178632.4		77065	34328518	NM_178632.4	Ints7	NP_848747.3	ILMN_2726174	004230377	S	3853	CCCGCTCTGGTTTCTACTAGATGACGTATTACTCTACACCTGATGTCTAG	1	+	193446217-193446266	1qH6	Mus musculus integrator complex subunit 7 (Ints7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			5930412E23Rik	5930412E23Rik
Mus musculus	RefSeq	ILMN_214304	ILMN_214304	1700019D03RIK	NM_144953.2	NM_144953.2		67080	142367422	NM_144953.2	1700019D03Rik	NP_659202.1	ILMN_2646640	001300768	S	556	GAGCCCGGTGCTGTGATCGGTGCCCTGATCCTTGAATTCGCAGACCGTCT	1	-	52982199-52982248	1qC1.1	Mus musculus RIKEN cDNA 1700019D03 gene (1700019D03Rik), mRNA.				2410136C24Rik; AA410151; MGC58779	2410136C24Rik; AA410151; MGC58779
Mus musculus	RefSeq	ILMN_213441	ILMN_213441	FOXB2	NM_008023.1	NM_008023.1		14240	6679832	NM_008023.1	Foxb2	NP_032049.1	ILMN_1241055	000460575	S	1451	CTACACTCGGTGTTGGTGCATTCTTAGGGGACCCCGCGACCGGTGAGAAG	19	-	16946820-16946843:16946844-16946869	19qB	Mus musculus forkhead box B2 (Foxb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Fkh4	Fkh4
Mus musculus	RefSeq	ILMN_248963	ILMN_248963	ALG2	NM_019998.2	NM_019998.2		56737	31560365	NM_019998.2	Alg2	NP_064382.2	ILMN_2803334	002650494	S	2515	GCCAGCAGAAGGCATGGCGCAGACTAGAGGTACGTTTTCCCCCTTGAAGA	4	-	47483153-47483202	4qB1	Mus musculus asparagine-linked glycosylation 2 homolog (yeast, alpha-1,3-mannosyltransferase) (Alg2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CDGIi; ALPG2; 1110018A23Rik; MNCb-5081; 1300013N08Rik	CDGIi; ALPG2; 1110018A23Rik; MNCb-5081; 1300013N08Rik
Mus musculus	MEEBO	ILMN_215796	ILMN_215796	D130058E03	scl28379.4.1_98	NM_177685.2			31343299	NM_177685.2	D130058E03		ILMN_2663686	007210167	S	1799	GGCTTGTCCCAATCATATGTCAGGTGTGCAAACCATGATGCCTCGTGACG										
Mus musculus	RefSeq	ILMN_239905	ILMN_239905	GM1673	NM_001033458.1	NM_001033458.1		381633	85701980	NM_001033458.1	Gm1673	NP_001028630.1	ILMN_2802311	005080722	S	280	CTTCAGGACCTACGGAAAACCGCCTACAGCCTGGACGCACGGACGGAGAC	5	+	34300957-34300997:34301755-34301763	5qB2	Mus musculus gene model 1673, (NCBI) (Gm1673), mRNA. XM_922421					
Mus musculus	RefSeq	ILMN_220069	ILMN_220069	D930005D10RIK	NM_178702.3	NM_178702.3		231858	82546886	NM_178702.3	D930005D10Rik	NP_848817.2	ILMN_2717228	001780315	S	3341	CCAAGAAAATCCGCTTCCGCAATCCCCCTTCCTAATAGACCAAAGGACCC	5	-	142961081-142961096:142961097-142961130	5qG2	Mus musculus RIKEN cDNA D930005D10 gene (D930005D10Rik), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI536456	AI536456
Mus musculus	RefSeq	ILMN_214458	ILMN_214458	ITPKC	NM_181593.2	NM_181593.2		233011	31795579	NM_181593.2	Itpkc	NP_853624.1	ILMN_2648200	006380086	S	3028	CTCTTCTCTAAGGTGAAGCCCTAAGGTCTGCCAAGGCTGACACGTCTTCC	7	-	27992329-27992378	7qA3	Mus musculus inositol 1,4,5-trisphosphate 3-kinase C (Itpkc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IDA]	9130023N17Rik	9130023N17Rik
Mus musculus	RefSeq	ILMN_201278	ILMN_201278	LOC382358	XM_356460.1	XM_356460.1			38090449	XM_356460.1	LOC382358		ILMN_2541725	000940315	S	778	GAGCAATGCCTGCTCCCACCCAGCGGACAGAATTCCACAGGCTGTACTTT										
Mus musculus	MEEBO	ILMN_214087	ILMN_214087	9630055N22RIK	scl00226844.1_217	NM_198025.1			37574133	NM_198025.1	9630055N22Rik		ILMN_1250491	003420465	S	1042	TCGCCAGTGCAGAAGAAAGGTCTTGAGATCTGGAAAGTTTGTTTCCATGT										
Mus musculus	RefSeq	ILMN_197571	ILMN_197571	LOC328463	XM_286630.2	XM_286630.2			38076632	XM_286630.2	LOC328463		ILMN_1240622	006130170	S	411	CCTTCCACCCCTAAGGAAGAGGCTATGGCGGATATCCAGTGTGTACCTTC										
Mus musculus	MEEBO	ILMN_187545	ILMN_187545	SPAG16	scl17839.23.4_35				21746172	NM_029160	Spag16		ILMN_2445039	000380338	S	19	AAATCGGGGCAAATTCACAAACTGGTGGGCCACGAGAGTGAAGTGCACAG						A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of flagellar in eukaryotic cells and is responsible for their movements [goid 35086] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_188057	ILMN_188057	ZFP68	NM_013844.2	NM_013844.2		24135	113681056	NM_013844.2	Zfp68	NP_038872.1	ILMN_2455192	001070053	S	2165	GGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGATCTTACTGTAC	5	-	139047396-139047445	5qG2	Mus musculus zinc finger protein 68 (Zfp68), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	KRAZ2; mszf49; mszf22	KRAZ2; mszf49; mszf22
Mus musculus	RefSeq	ILMN_188057	ILMN_188057	ZFP68	NM_013844.2	NM_013844.2		24135	113681056	NM_013844.2	Zfp68	NP_038872.1	ILMN_2449449	003170075	S	2157	CAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGATCT	5	-	139047404-139047453	5qG2	Mus musculus zinc finger protein 68 (Zfp68), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	KRAZ2; mszf49; mszf22	KRAZ2; mszf49; mszf22
Mus musculus	RefSeq	ILMN_188505	ILMN_261574	LYZS	NM_017372.2	NM_017372.2		17105	31560450	NM_017372.2	Lyzs	NP_059068.1	ILMN_2766780	007380022	S	1178	CTGTATCAGCAAATAACCACAGGAGCAAATCTAATCTCATAGTGAAAAAG	10	-	116714418-116714467	10qD2	Mus musculus lysozyme (Lyzs), mRNA.				Lys; Lzm; Lzp; Lzm-s1; AI326280	Lys; Lzm; Lzp; Lzm-s1; AI326280
Mus musculus	RefSeq	ILMN_261574	ILMN_261574	LYZS	NM_017372.2	NM_017372.2		17105	31560450	NM_017372.2	Lyzs	NP_059068.1	ILMN_2939681	001940608	S	1153	CACACTAACTCTGAGACAGATGAGCCTGTATCAGCAAATAACCACAGGAG	10	-	116714443-116714492	10qD2	Mus musculus lysozyme (Lyzs), mRNA.				Lys; Lzm; Lzp; Lzm-s1; AI326280	Lys; Lzm; Lzp; Lzm-s1; AI326280
Mus musculus	RefSeq	ILMN_223970	ILMN_256245	CD3E	NM_007648.3	NM_007648.3		12501	145966772	NM_007648.3	Cd3e	NP_031674.1	ILMN_1238847	006590239	S	1351	AGATCCTCGGATGGTCATCTCCATCTCCATGAATACACCAGCCCCCTCTC				9qA5.2	Mus musculus CD3 antigen, epsilon polypeptide (Cd3e), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISO]; A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein [goid 42105] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IDA]; A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor [goid 46649] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]	T3e; CD3epsilon; CD3; AI504783	T3e; CD3epsilon; CD3; AI504783
Mus musculus	Riken	ILMN_201773	ILMN_201773	2310020N23RIK	ri|2310020N23|ZX00052O13|AK009427|1262					AK009427	2310020N23Rik		ILMN_1243835	005050725	S	1028	GAGGGGAACTAATTGGGGGCGGAAGTGATGTCAGAAGTGAGAGGCTGTGC										
Mus musculus	RefSeq	ILMN_214918	ILMN_229142	MTMR7	NM_001040699.1	NM_001040699.1		54384	103472016	NM_001040699.1	Mtmr7	NP_001035789.1	ILMN_2653457	003440451	S	2100	AATTAAGGGGAAAGTGCAATTCGTAGTAAAAATGTTGAGAAATGGCAAGT	8	-	41636809-41636858	8qA4	Mus musculus myotubularin related protein 7 (Mtmr7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221603	ILMN_221603	NCAM2	NM_010954.3	NM_010954.3		17968	118130199	NM_010954.3	Ncam2	NP_035084.1	ILMN_2737666	004490097	S	2102	GGAGCATCTGCAGTGGACAATGGGCTACGAAGTGCAAATCACAGCTGCCA	16	+	81589938-81589987	16qC3.3	Mus musculus neural cell adhesion molecule 2 (Ncam2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ncam-2; RNCAM; Ocam	Ncam-2; RNCAM; Ocam
Mus musculus	RefSeq	ILMN_211784	ILMN_211784	CMTM8	NM_027294.1	NM_027294.1		70031	21312513	NM_027294.1	Cmtm8	NP_081570.1	ILMN_2801427	007330070	S	627	AGGAAGGGCACAACTTCAACAGCTGGGCAGCCTCCTCGTTCTTTGCCTTC	9	-	114638430-114638443:114639336-114639371	9qF3	Mus musculus CKLF-like MARVEL transmembrane domain containing 8 (Cmtm8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	AA408515; Cklfsf8; 2700018N07Rik	AA408515; Cklfsf8; 2700018N07Rik
Mus musculus	MEEBO	ILMN_196102	ILMN_196102	MJ-500-43_317	MJ-500-43_317						MJ-500-43_317		ILMN_1231451	005690360	S	12	GACCTGGCTACCCTACCCCGCTTCACTCAACTTTTAATCCAAAACAAGCG										
Mus musculus	Riken	ILMN_206695	ILMN_206695	C130075H21RIK	ri|C130075H21|PX00171H02|AK081771|2014					AK081771	C130075H21Rik		ILMN_1217814	001980440	S	1752	CTTACCTGTGTGTGGGGGCACTGTGAACTCCCAGAGGGCATGCAGCTGTA										
Mus musculus	MEEBO	ILMN_184393	ILMN_184393	STRN	scl7738.1.1_14				6755685	NM_011500	Strn		ILMN_2418266	002230551	S	9	CCATTCCCGCCCCAGCTATATGATCCAATGCCTGTTTTAGGAAGAACCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220488	ILMN_220488	TIMM17A	NM_011590.2	NM_011590.2		21854	142345310	NM_011590.2	Timm17a	NP_035720.1	ILMN_2722704	002350204	S	834	CATTCCTTCGGGACTTCTCTGCCTGGTGTTTTGTGTACAGTTATTCAGAC	1	-	137198145-137198194	1qE4	Mus musculus translocase of inner mitochondrial membrane 17a (Timm17a), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	17kDa; mTim17a	17kDa; mTim17a
Mus musculus	RefSeq	ILMN_214844	ILMN_240608	SEC23IP	NM_001029982.1	NM_001029982.1		207352	71725364	NM_001029982.1	Sec23ip	NP_001025153.1	ILMN_2755804	006550168	S	2507	CGACCCAGTGGCGTACAGATTAGAGCCTATGATTGCTCCAGATTTGGACT	7	+	135920800-135920849	7qF3	Mus musculus Sec23 interacting protein (Sec23ip), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]	D7Ertd373e	D7Ertd373e
Mus musculus	RefSeq	ILMN_202064	ILMN_213646	DDX21	NM_019553.2	NM_019553.2		56200	72384373	NM_019553.2	Ddx21	NP_062426.2	ILMN_2546724	003120484	S	53	AGCCGGTAGGCCTGAGAAGCTGCTGCTGAATAATGCCGGGAAAACTCCGC	10	-	62064944-62064962:62064963-62064993	10qB4	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 (Ddx21), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a RNA helix [goid 3724] [evidence ISS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI255159; D10Ertd645e; D10Wsu42e; AL022742	AI255159; D10Ertd645e; D10Wsu42e; AL022742
Mus musculus	RefSeq	ILMN_213646	ILMN_213646	DDX21	NM_019553.2	NM_019553.2		56200	72384373	NM_019553.2	Ddx21	NP_062426.2	ILMN_2639272	000650528	S	4612	AGCCTGTTTTTATGTTCCAGCTGTCTATGTATGTTTTCCTGAAACTGTAC	10	-	62043076-62043125	10qB4	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 (Ddx21), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a RNA helix [goid 3724] [evidence ISS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI255159; D10Ertd645e; D10Wsu42e; AL022742	AI255159; D10Ertd645e; D10Wsu42e; AL022742
Mus musculus	RefSeq	ILMN_218812	ILMN_218812	TMEM43	NM_028766.1	NM_028766.1		74122	21311890	NM_028766.1	Tmem43	NP_083042.1	ILMN_2831283	007200259	S	2477	CAGGATCCCTGACCCTAGCGATACTTAACAGTTCTTCCCATGTCCTATGG	6	+	91453589-91453638	6qD1	Mus musculus transmembrane protein 43 (Tmem43), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1200015A22Rik	1200015A22Rik
Mus musculus	RefSeq	ILMN_197901	ILMN_211485	DOCK7	NM_026082.4	NM_026082.4		67299	110835727	NM_026082.4	Dock7	NP_080358.3	ILMN_2529763	006520465	S	1514	ATGATGCTTGCAACTTGACCAGCTTCCGGCCTGCCACCCTCACTGTGGCA	4	-	98727884-98727933	4qC6	Mus musculus dedicator of cytokinesis 7 (Dock7), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence IDA]	Gm430; 3110056M06Rik; mKIAA1771	Gm430; 3110056M06Rik; mKIAA1771
Mus musculus	RefSeq	ILMN_211485	ILMN_211485	DOCK7	NM_026082.4	NM_026082.4		67299	110835727	NM_026082.4	Dock7	NP_080358.3	ILMN_2616346	003800719	S	6772	GGTCCATTCATTTTTTGAACCATTTTAAATGTAGTAATGCTTATTTTAAA	4	-	98603577-98603626	4qC6	Mus musculus dedicator of cytokinesis 7 (Dock7), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence IDA]	Gm430; 3110056M06Rik; mKIAA1771	Gm430; 3110056M06Rik; mKIAA1771
Mus musculus	RefSeq	ILMN_199976	ILMN_211485	DOCK7	NM_026082.4	NM_026082.4		67299	110835727	NM_026082.4	Dock7	NP_080358.3	ILMN_1221901	003890672	S	2465	AGAGCAGCATTTCAGCCTTGAATTCCTCACAGCTGGAACCCGTAGTCCGG	4	-	98674692-98674741	4qC6	Mus musculus dedicator of cytokinesis 7 (Dock7), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence IDA]	Gm430; 3110056M06Rik; mKIAA1771	Gm430; 3110056M06Rik; mKIAA1771
Mus musculus	RefSeq	ILMN_199968	ILMN_211485	DOCK7	NM_026082.4	NM_026082.4		67299	110835727	NM_026082.4	Dock7	NP_080358.3	ILMN_2537125	000620735	S	3143	AGCTCGACGCTCCGAGGAAAAGTCGCTTTCCAGAACGTTTTATGGATGAT	4	-	98655961-98656010	4qC6	Mus musculus dedicator of cytokinesis 7 (Dock7), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence IDA]	Gm430; 3110056M06Rik; mKIAA1771	Gm430; 3110056M06Rik; mKIAA1771
Mus musculus	RefSeq	ILMN_200349	ILMN_200349	LOC386275	XM_359153.1	XM_359153.1			38081392	XM_359153.1	LOC386275		ILMN_1251327	002320703	S	743	CCAGATACCAGGGATGTGAGAAGCTCCCAGGACCCAGTGGGGATGACCTT										
Mus musculus	RefSeq	ILMN_218198	ILMN_218198	C030006K11RIK	NM_145472.1	NM_145472.1		223665	21735488	NM_145472.1	C030006K11Rik	NP_663447.1	ILMN_2692853	006060685	S	1350	GCCTAGATAGGCATCCAAGAGACCGACACCCCACTCCTGCTCAGGATTAG	15	-	76552228-76552277	15qD3	Mus musculus RIKEN cDNA C030006K11 gene (C030006K11Rik), mRNA.				MGC38904; 1110033I13Rik	MGC38904; 1110033I13Rik
Mus musculus	RefSeq	ILMN_212669	ILMN_327369	LOC100044298	XM_001471758.1	XM_001471758.1		100044298	149260197	XM_001471758.1	LOC100044298	XP_001471808.1	ILMN_2629030	004280608	S	1176	GTCCTGATACCTGTCTTCCTGCGTGTTCATCTTTGAGCTCCCATTGTCTC					PREDICTED: Mus musculus hypothetical protein LOC100044298 (LOC100044298), mRNA.					
Mus musculus	RefSeq	ILMN_211502	ILMN_211502	MEP1A	NM_008585.2	NM_008585.2		17287	31982198	NM_008585.2	Mep1a	NP_032611.2	ILMN_2616479	001450400	S	2739	GTCTATATGCACGTGTGTTAGAACCGAATACTCAGTTTTCACCAGACACA	17	-	43611412-43611461	17qB3	Mus musculus meprin 1 alpha (Mep1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	AW107200; Mep-1; Mep-1a; Mep1; AI098089	AW107200; Mep-1; Mep-1a; Mep1; AI098089
Mus musculus	RefSeq	ILMN_202610	ILMN_240518	H3F3B	XM_915849.1	XM_915849.1		15081	94391235	XM_915849.1	H3f3b	XP_920942.1	ILMN_1231168	004900450	S	2815	GGGCTGAGTAAAGTCTGAGGCAGCCCTGAGCGACTGGCTTGTTGAGTTGC				11qE2	PREDICTED: Mus musculus H3 histone, family 3B (H3f3b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190706	ILMN_190706	1190002N15RIK	scl6432.1.1_204				51765053	XM_147036	1190002N15Rik		ILMN_2524691	004210669	S	3411	CCACCTATTCATAACATGGAGGTTGGGACTCCTAGGAGAGCCGTCTGTGG										
Mus musculus	Riken	ILMN_201985	ILMN_201985	2310003M01RIK	ri|2310003M01|ZX00038O24|AK009124|1930					AK009124	2310003M01Rik		ILMN_1214024	005290315	S	1825	CAGTGTAAGGATCCGTTCTCCTGCTCCTCAACTCTACAGCAGCACATTTC										
Mus musculus	MEEBO	ILMN_215919	ILMN_215919	2310016D23RIK	scl17899.1_1				51705493	XM_489727	2310016D23Rik		ILMN_2772950	004040039	S	90	CCGGCCTTTGTCATCCCTTATCGCTGCTCCACCCTGTTTGTCTACAGCTG										
Mus musculus	MEEBO	ILMN_190069	ILMN_190069	1700028N14RIK	scl073280.2_16						1700028N14Rik		ILMN_2466901	000780538	S	16	ACAGGGCTCGCCCTGATTGGTTGCTCCACCCCAGACAACTGTTGTGAGAT								Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222808	ILMN_222808	1500015O10RIK	NM_024283.2	NM_024283.2		78896	142360223	NM_024283.2	1500015O10Rik	NP_077245.1	ILMN_1249000	004610504	S	536	TGGTGACTACTACCAGCGTCATTATGATGAAGATGCGGCCATTGGTCCCC	1	+	43799149-43799198	1qC1.1	Mus musculus RIKEN cDNA 1500015O10 gene (1500015O10Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Ecrg4	Ecrg4
Mus musculus	RefSeq	ILMN_217382	ILMN_217382	SPATA2L	NM_030176.2	NM_030176.2		78779	27753957	NM_030176.2	Spata2L	NP_084452.2	ILMN_1229246	005130546	S	2147	GGGCTGGATTTTCATCAACCACTCGAAGGCCCAGGCACAGAGATCACCAC	8	-	125756341-125756390	8qE1	Mus musculus spermatogenesis associated 2-like (Spata2L), mRNA.				mKIAA4138; KIAA4138; 2610039E05Rik; AI648233	mKIAA4138; KIAA4138; 2610039E05Rik; AI648233
Mus musculus	RefSeq	ILMN_243800	ILMN_243800	INADL	NM_001005784.1	NM_001005784.1		12695	55769580	NM_001005784.1	Inadl	NP_001005784.1	ILMN_3162854	002350292	I	3131	CCTTGAGGTCACTCCTTTTTGTGTCTCACCGCTTCTCTGGAATCATGAGC	4	+	98164120-98164169	4qC6	Mus musculus InaD-like (Drosophila) (Inadl), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RP23-291M22.2; Cipp; Patj	RP23-291M22.2; Cipp; Patj
Mus musculus	RefSeq	ILMN_198782	ILMN_198782	GM498	XM_146165.5	XM_146165.5		244239	82915634	XM_146165.5	Gm498	XP_146165.5	ILMN_1247100	004010441	S	910	ACTGGCCTACGATTCCGGATGCAGAAAGAGATGGCAAAGGTGGTCTCTCC	7	+	151082327-151082376	7qF5	PREDICTED: Mus musculus gene model 498, (NCBI) (Gm498), mRNA.					
Mus musculus	Riken	ILMN_207030	ILMN_207030	A730082L10RIK	ri|A730082L10|PX00661O24|AK080545|1141					AK080545	A730082L10Rik		ILMN_1220032	000540500	S	812	GGAAAGGAGCTTTGCCTTGGGACCTTTGGGTGTGTTTGTCCCGGCTCTAA										
Mus musculus	RefSeq	ILMN_204922	ILMN_257210	ADRBK2	NM_001035531.1	NM_001035531.1		320129	78711827	NM_001035531.1	Adrbk2	NP_001030608.1	ILMN_1256771	005900561	S	1297	GTCTTGTGTGACTGGGTTCTACTTGTTCCATGCCTTGAGCCTGGTCTGTC	5	-	113389798-113389847	5qF	Mus musculus adrenergic receptor kinase, beta 2 (Adrbk2), transcript variant 2, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor [goid 47696] [evidence IEA]	AI851927; Adrbk-2; 4833444A01Rik; GRK3; AW551196; Bark-2	AI851927; Adrbk-2; 4833444A01Rik; GRK3; AW551196; Bark-2
Mus musculus	RefSeq	ILMN_257210	ILMN_257210	ADRBK2	NM_001035531.1	NM_001035531.1		320129	78711827	NM_001035531.1	Adrbk2	NP_001030608.1	ILMN_3109979	004040474	A	429	GTCCAGAGCCATCTCTCCAAGAAACAGGTGACGGCTACACTTTTCCAGCC	5	-	113390666-113390668:113395932-113395978	5qF	Mus musculus adrenergic receptor kinase, beta 2 (Adrbk2), transcript variant 2, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor [goid 47696] [evidence IEA]	AI851927; Adrbk-2; 4833444A01Rik; GRK3; AW551196; Bark-2	AI851927; Adrbk-2; 4833444A01Rik; GRK3; AW551196; Bark-2
Mus musculus	MEEBO	ILMN_209307	ILMN_209307	6430590I03RIK	scl48655.1.3_128				51769458	XM_489535	6430590I03Rik		ILMN_2594539	006980609	S	1333	GCATTGTGCAGCATTGTAATTCTGGTCCTTGGTTGGCATGAAAGGACACA										
Mus musculus	RefSeq	ILMN_211043	ILMN_211043	CITED1	NM_007709.3	NM_007709.3		12705	42476051	NM_007709.3	Cited1	NP_031735.1	ILMN_1213474	003990292	S	584	AACCCCCATCCTTCAACCTGCATCCTACCCCTCACCTGATGGCCAGCATG	X	-	99443116-99443165	XqD	Mus musculus Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 (Cited1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AI316840; Msg1; AU019144	AI316840; Msg1; AU019144
Mus musculus	RefSeq	ILMN_196857	ILMN_196857	LOC217372	XM_126827.4	XM_126827.4			38049271	XM_126827.4	LOC217372		ILMN_2526042	000520192	S	708	GGGGTTTTGTCCAGCTAATGTTTCCAACAGTGCTGCGATTATGGGAGCCC										
Mus musculus	RefSeq	ILMN_194468	ILMN_251825	RGNEF	NM_012026.2	NM_012026.2		110596	123702009	NM_012026.2	Rgnef	NP_036156.2	ILMN_1229911	000070187	S	4984	CGGGCCATCAGAGACCTGCTCTCCAAGAAAACAGCAAGGAGTCTTATAAA	13	-	98699369-98699418	13qD1	Mus musculus Rho-guanine nucleotide exchange factor (Rgnef), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; Generation of a long process from a neuron whose cell body resides in the central nervous system. The process carries efferent (outgoing) action potentials from the cell body towards target cells [goid 21955] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rhoip2; RIP2; 9230110L08Rik; p190RhoGEF; RhoGEF; AI323540; D13Bwg1089e	Rhoip2; RIP2; 9230110L08Rik; p190RhoGEF; RhoGEF; AI323540; D13Bwg1089e
Mus musculus	RefSeq	ILMN_221447	ILMN_221447	EBF2	NM_010095.4	NM_010095.4		13592	145966793	NM_010095.4	Ebf2	NP_034225.1	ILMN_1251248	006940044	S	3788	CCAACAGAGCCCCACAGTCCTTCCTCTTTGGGTACTCGATTCAGGCATGG				14qD1	Mus musculus early B-cell factor 2 (Ebf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	O/E-3; Mmot1; D14Ggc1e	O/E-3; Mmot1; D14Ggc1e
Mus musculus	RefSeq	ILMN_260508	ILMN_260508	LIG3	NM_010716.2	NM_010716.2		16882	71061469	NM_010716.2	Lig3	NP_034846.2	ILMN_2828819	005420487	S	5439	GCATTTACAAGTTCTCTGGCATTATCCCCCACACACCAGATGGGACAGGC	11	+	82617270-82617319	11qC	Mus musculus ligase III, DNA, ATP-dependent (Lig3), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m) [goid 3910] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC78176; D11Wsu78e	MGC78176; D11Wsu78e
Mus musculus	RefSeq	ILMN_186647	ILMN_260508	LIG3	NM_010716.2	NM_010716.2		16882	71061469	NM_010716.2	Lig3	NP_034846.2	ILMN_1246976	004610026	S	4481	TACAGACCCACCACCCCATGTAACTCCTAAAGTAAGATCCCATCAGGCGG	11	+	82616312-82616361	11qC	Mus musculus ligase III, DNA, ATP-dependent (Lig3), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m) [goid 3910] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC78176; D11Wsu78e	MGC78176; D11Wsu78e
Mus musculus	RefSeq	ILMN_215745	ILMN_215745	GLRA4	NM_010297.1	NM_010297.1		14657	21040222	NM_010297.1	Glra4	NP_034427.1	ILMN_2663121	004010678	S	983	GCCGCTTCTATTTTCGTGGCTATGGCCTAGGACACTGCTTACAAGCAAGG	X	-	133292453-133292502	XqF1	Mus musculus glycine receptor, alpha 4 subunit (Glra4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]	MGC130237; MGC130223	MGC130237; MGC130223
Mus musculus	RefSeq	ILMN_220395	ILMN_220395	BNC2	NM_172870.3	NM_172870.3		242509	46485766	NM_172870.3	Bnc2	NP_766458.2	ILMN_2885206	007200053	S	3395	AGTTTTGGGAGAGGGTGGATCTTTTACTTGGGGTAAAAACAAGAGTGCCC	4	-	83921429-83921478	4qC4	Mus musculus basonuclin 2 (Bnc2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MGC124423; MGC124424; 5031434M05Rik	MGC124423; MGC124424; 5031434M05Rik
Mus musculus	RefSeq	ILMN_220395	ILMN_220395	BNC2	NM_172870.3	NM_172870.3		242509	46485766	NM_172870.3	Bnc2	NP_766458.2	ILMN_2721466	004010653	S	3217	CCAGATGGCCTACATGTTTGAACTGCCATAGCCAGTGTGTGCTTCCGCAG	4	-	83921607-83921656	4qC4	Mus musculus basonuclin 2 (Bnc2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MGC124423; MGC124424; 5031434M05Rik	MGC124423; MGC124424; 5031434M05Rik
Mus musculus	RefSeq	ILMN_209642	ILMN_209642	IGF2	NM_010514.2	NM_010514.2		16002	76150628	NM_010514.2	Igf2	NP_034644.1	ILMN_2597769	005050653	S	4585	CCAGCAGTGGCCCCAGGTGTTTGCCTCAACTCAGTCCCTCTAACATGCAT	7	-	149836761-149836810	7qF5	Mus musculus insulin-like growth factor 2 (Igf2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the insulin-like growth factor receptor [goid 5159] [evidence IPI]	Igf-II; M6pr; Mpr; Peg2; Igf-2; AL033362	Igf-II; M6pr; Mpr; Peg2; Igf-2; AL033362
Mus musculus	RefSeq	ILMN_209599	ILMN_209599	1700123O20RIK	NM_021437.1	NM_021437.1		58248	10946805	NM_021437.1	1700123O20Rik	NP_067412.1	ILMN_2999447	007330296	S	1564	GAAGGCTAGCACTGTTTTTACCCTAGTGGTATGTCACCTGGACTCTCTCC	14	+	55309299-55309348	14qC3	Mus musculus RIKEN cDNA 1700123O20 gene (1700123O20Rik), mRNA.				MNCb-2990	MNCb-2990
Mus musculus	RefSeq	ILMN_209599	ILMN_209599	1700123O20RIK	NM_021437.1	NM_021437.1		58248	10946805	NM_021437.1	1700123O20Rik	NP_067412.1	ILMN_2597332	003520500	S	1267	GAGGTCAGTGAGCCAGATTTCGTGGCGAAGTTTTACCAAGCAGTGGCTGC	14	+	55309002-55309051	14qC3	Mus musculus RIKEN cDNA 1700123O20 gene (1700123O20Rik), mRNA.				MNCb-2990	MNCb-2990
Mus musculus	Riken	ILMN_205350	ILMN_205350	B230377N03RIK	ri|B230377N03|PX00161D17|AK080850|1853					AK080850	B230377N03Rik		ILMN_2571899	006550162	S	1307	CAGCATTTTTCGGGCAAAGGGGCTGGATTCCGTAGCTGCTTCTGACAGGC										
Mus musculus	RefSeq	ILMN_254312	ILMN_254312	TREML2	NM_001033405.1	NM_001033405.1		328833	85677479	NM_001033405.1	Treml2	NP_001028577.1	ILMN_2980379	007510647	S	2262	GAGGCAAGAGAAGGACCAAAGTCAGGGGACAGAGGGGAGAAGGCATCTTC	17	+	47776278-47776327	17qC	Mus musculus triggering receptor expressed on myeloid cells-like 2 (Treml2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gm750; Tlt2; AW049306	Gm750; Tlt2; AW049306
Mus musculus	MEEBO	ILMN_224000	ILMN_224000	OLFR1209	scl19030.2.52_73				33239035	NM_146461	Olfr1209		ILMN_2772889	007150747	S	608	CCATTTGTACAGTGAGTTTCCTCATGCTGATGGTCTCTTATGTCATTATT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	MEEBO	ILMN_191634	ILMN_191634	9330158F14RIK	scl19200.10.1_39				28892982	NM_177074	9330158F14Rik		ILMN_2676705	001780021	S	2030	CCCCATCCTTCCCATGGATAATTTAAACAGTTAAGCTAACCGTGACAAAG										
Mus musculus	RefSeq	ILMN_246849	ILMN_246849	STYX	NM_019637.3	NM_019637.3		56291	118130655	NM_019637.3	Styx	NP_062611.2	ILMN_2838492	004050768	S	948	CAGAACGGCTGACCTGTGAGGACTGTTACATGGGTGTGAGCTTCCATCTG	14	+	45993249-45993260:45993261-45993298	14qC1	Mus musculus serine/threonine/tyrosine interaction protein (Styx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	hStyxb; 0610039A20Rik; MGC106795	hStyxb; 0610039A20Rik; MGC106795
Mus musculus	RefSeq	ILMN_215069	ILMN_215069	PKMYT1	NM_023058.2	NM_023058.2		268930	110625698	NM_023058.2	Pkmyt1	NP_075545.2	ILMN_2937184	007160689	S	1676	GCCCCCTCCTGGACAGCACCCTCTCCAGCAGCTGGGATAATGACAGCATA				17qA3.3	Mus musculus protein kinase, membrane associated tyrosine/threonine 1 (Pkmyt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	6230424P17; Myt1; AW209059	6230424P17; Myt1; AW209059
Mus musculus	RefSeq	ILMN_217510	ILMN_217510	2210010C04RIK	NM_023333.4	NM_023333.4		67373	71043960	NM_023333.4	2210010C04Rik	NP_075822.3	ILMN_2684115	007560139	S	1994	GTATGGAGATAATCTGGCCTATCTTTTTCTCAACCACACCTCAAACACCA	6	-	40981140-40981189	6qB1	Mus musculus RIKEN cDNA 2210010C04 gene (2210010C04Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	AV072249	AV072249
Mus musculus	RefSeq	ILMN_209434	ILMN_310357	LOC100046232	XM_001475817.1	XM_001475817.1		100046232	149264139	XM_001475817.1	LOC100046232	XP_001475867.1	ILMN_2595732	003840521	S	1805	AGTCATTTCACTGTAGTGTGCACAACGGCGTCTGTCTGGGTGTCCTTGTG					PREDICTED: Mus musculus similar to NFIL3/E4BP4 transcription factor (LOC100046232), mRNA.					
Mus musculus	RefSeq	ILMN_210177	ILMN_210177	2410018C17RIK	NM_178390.2	NM_178390.2		74504	31341609	NM_178390.2	2410018C17Rik	NP_848477.1	ILMN_1218311	006280630	S	1519	CAGGATGACTGTGGTTGCTGTCTGTCACCTTGGTGCCTGACCAGTGGAAA	5	-	33943156-33943205	5qB2	Mus musculus RIKEN cDNA 2410018C17 gene (2410018C17Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			KIAA4017; 5430419M09Rik; Dntnp	KIAA4017; 5430419M09Rik; Dntnp
Mus musculus	RefSeq	ILMN_214339	ILMN_247561	ITLN1	NM_010584.2	NM_010584.2		16429	118130045	NM_010584.2	Itln1	NP_034714.1	ILMN_2772117	004230189	S	957	CTCACAATGGGTACAGCAGTAGCCGGAAGATAACTGAAGCAGCTGTGCTT	1	-	173448386-173448435	1qH3	Mus musculus intelectin 1 (galactofuranose binding) (Itln1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; The portion of the plasma membrane surrounding the brush border [goid 31526] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode [goid 9624] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	Lfr; Itlna; mLfR; Itln; IntL; Itln2; Itln1	Lfr; Itlna; mLfR; Itln; IntL; Itln2; Itln1
Mus musculus	MEEBO	ILMN_193024	ILMN_193024	SCL0001849.1_2273	scl0001849.1_2273	AK031598.1			26327450	AK031598.1	scl0001849.1_2273		ILMN_1250116	006370020	S	11	CGGGCTCTGCTACTCTATAAGGGCCTCTGCACTCCGTTTCTCTTGTCAGG										
Mus musculus	RefSeq	ILMN_222096	ILMN_222096	FGF14	NM_010201.3	NM_010201.3		14169	142367254	NM_010201.3	Fgf14	NP_034331.2	ILMN_2744522	006060164	S	491	CCGCGGGCTTTGCAATGGCAACCTGGTGGATATCTTCTCTAAAGTGCGCA	14	-	124591586-124591635	14qE5	Mus musculus fibroblast growth factor 14 (Fgf14), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MGC129318; mFHF-4(1B); Fhf4; MGC129319; FHF-4	MGC129318; mFHF-4(1B); Fhf4; MGC129319; FHF-4
Mus musculus	RefSeq	ILMN_197629	ILMN_235450	CDH12	NM_001008420.1	NM_001008420.1		215654	56606024	NM_001008420.1	Cdh12	NP_001008420.1	ILMN_1253923	006420673	S	2353	TCACCGAAGGCTACAGGAAAATGACGCAGACCCAGCGGCTCCACCATACG	15	+	21516002-21516051	15qA2	Mus musculus cadherin 12 (Cdh12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CDHB; MGC92959	CDHB; MGC92959
Mus musculus	RefSeq	ILMN_235450	ILMN_235450	CDH12	NM_001008420.1	NM_001008420.1		215654	56606024	NM_001008420.1	Cdh12	NP_001008420.1	ILMN_2985389	007200338	S	4945	GGACGATCTTCATATTAGAGCAGCATCTACCCACAGGTCCTCTGTTTGCC	15	+	21518594-21518643	15qA2	Mus musculus cadherin 12 (Cdh12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CDHB; MGC92959	CDHB; MGC92959
Mus musculus	Riken	ILMN_206152	ILMN_206152	C230094I18RIK	ri|C230094I18|PX00177B12|AK082716|3037					AK082716	C230094I18Rik		ILMN_1242177	002600328	S	2903	AGATTTCCTGTCTTTGCTTGTGAGCACGGAGACCCCGAGTGGGGAGGCCA										
Mus musculus	RefSeq	ILMN_219594	ILMN_251185	APOB	NM_009693.1	NM_009693.1		238055	110625670	NM_009693.1	Apob	NP_033823.1	ILMN_2710942	001190270	S	4025	CTTCAATCCATACTTCAGGAGGGGTCCTACAAGCTACAGCAGGTCCATCA	12	+	8022745-8022794	12qA1.1	Mus musculus apolipoprotein B (Apob), mRNA. XM_894981 XM_906759	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42159] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IGI]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IGI]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IMP]; The release of triacylglycerols, any triester of glycerol, from storage within cells or tissues, making them available for metabolism [goid 6642] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IMP]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IGI]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol [goid 45540] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of triacylglycerol, any triester of glycerol [goid 19433] [evidence IMP]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IGI]; The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42158] [evidence IGI]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [evidence IMP]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [evidence IGI]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IGI]		AI315052; apob-100; apob-48	AI315052; apob-100; apob-48
Mus musculus	RefSeq	ILMN_222991	ILMN_222991	OLFR1413	NM_147037.1	NM_147037.1		259039	22128874	NM_147037.1	Olfr1413	NP_667248.1	ILMN_2757778	006660465	S	611	TGTCATGTTTGGCATCTGTGGGCTCATCATCGTGTCTACCACTCTTGTGG	1	+	94470360-94470409	1qD	Mus musculus olfactory receptor 1413 (Olfr1413), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR208-1	MOR208-1
Mus musculus	RefSeq	ILMN_221244	ILMN_221244	AI449175	NM_172754.2	NM_172754.2		234362	113930739	NM_172754.2	AI449175	NP_766342.2	ILMN_3143088	006860598	A	1989	CCAGAGCCCTATAACCAAGAAGGCTAGCACATGGACTCTGATGGATCATC	8	-	72134976-72135025	8qB3.3	Mus musculus expressed sequence AI449175 (AI449175), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C530032E20; mszf62; AW108241	C530032E20; mszf62; AW108241
Mus musculus	RefSeq	ILMN_221244	ILMN_221244	AI449175	NM_172754.2	NM_172754.2		234362	113930739	NM_172754.2	AI449175	NP_766342.2	ILMN_1228048	006860072	S	1799	TATGAACCTAACATAGTATAGCCTTCAGGGGTCACGGACTGTAGAACCCC	8	-	72135166-72135215	8qB3.3	Mus musculus expressed sequence AI449175 (AI449175), transcript variant 1, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C530032E20; mszf62; AW108241	C530032E20; mszf62; AW108241
Mus musculus	RefSeq	ILMN_198838	ILMN_198838	LOC233529	XM_133614.4	XM_133614.4			38088807	XM_133614.4	LOC233529		ILMN_2533104	002690500	S	750	CTCTCAGAGGTACCACCTCAGCAGGGATCCCTACACTTGCTTCTGGATAT										
Mus musculus	RefSeq	ILMN_212939	ILMN_212939	GEMIN6	NM_026053.1	NM_026053.1		67242	21313049	NM_026053.1	Gemin6	NP_080329.1	ILMN_1214319	006180315	S	36	TCTGCGGCGTTTCCCTGAGTCGTGCAGAGTTCTTGGGATTGGCGGCCTCT	17	+	80132850-80132899	17qE3	Mus musculus gem (nuclear organelle) associated protein 6 (Gemin6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810470M17Rik; 2610019B15Rik	2810470M17Rik; 2610019B15Rik
Mus musculus	RefSeq	ILMN_212939	ILMN_212939	GEMIN6	NM_026053.1	NM_026053.1		67242	21313049	NM_026053.1	Gemin6	NP_080329.1	ILMN_2631813	002070161	S	38	GCGGCGTTTCCCTGAGTCGTGCAGAGTTCTTGGGATTGGCGGCCTCTGGA	17	+	80132852-80132901	17qE3	Mus musculus gem (nuclear organelle) associated protein 6 (Gemin6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810470M17Rik; 2610019B15Rik	2810470M17Rik; 2610019B15Rik
Mus musculus	MEEBO	ILMN_222260	ILMN_222260	DKK1	scl52578.4_483	NM_010051.2			31542556	NM_010051.2	Dkk1		ILMN_2747037	004280368	S	1954	TATTGGAAGGGAGGGAATGCCCAAGCAAGTGATTCCAGATGATGGGCAGA						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IDA]	Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220145	ILMN_220145	ATP6V1B1	NM_134157.2	NM_134157.2		110935	24371244	NM_134157.2	Atp6v1b1	NP_598918.1	ILMN_2879910	005890075	S	1720	AGGGGCTTTTGGAGAATGGAAGCGGCGAGGGGGAGGGATATTAAGCAGGC	6	+	83708597-83708646	6qC3	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit B1 (Atp6v1b1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence ISO]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IMP]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IMP]	Vpp3; D630039P21Rik; Vpp-3; AW208839; D630030L16Rik; Atp6b1; D630003L15	Vpp3; D630039P21Rik; Vpp-3; AW208839; D630030L16Rik; Atp6b1; D630003L15
Mus musculus	MEEBO	ILMN_213706	ILMN_213706	CYP24A1	scl18279.12.338_256	NM_009996.2			31542443	NM_009996.2	Cyp24a1		ILMN_2639900	006370133	S	3197	GCCAAAGATGTAGTTCTGTAGTAAGAGTTTTTGCTTGGTCCATGTGGGGC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 42359] [evidence IMP]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydroxylation of C-24 of 25-hydroxycalciferol (25-hydroxyvitamin D3) to form 24(R),25-dihydroxycalciferol [goid 8403] [evidence IMP]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216119	ILMN_216119	OLFR935	NM_146746.1	NM_146746.1		258741	22129352	NM_146746.1	Olfr935	NP_666957.1	ILMN_2667577	001660484	S	571	GATGCTTTTGTTAATGAGTTGATGATTTTAATTTTTAGTGGAGTTAATAT	9	-	38802398-38802447	9qA5.1	Mus musculus olfactory receptor 935 (Olfr935), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-11	MOR171-11
Mus musculus	RefSeq	ILMN_217293	ILMN_217293	SPT1	NM_009267.1	NM_009267.1		20770	6678120	NM_009267.1	Spt1	NP_033293.1	ILMN_2845370	007510470	S	359	CAGAACAGTGGCGTTGACAACACTGAAACGGAAGAAGAGTCCAATGCAAA	Un|NT_166442.1	-	39289-39338		Mus musculus salivary protein 1 (Spt1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC118102; MGC29130; Spt-1	MGC118102; MGC29130; Spt-1
Mus musculus	RefSeq	ILMN_217293	ILMN_217293	SPT1	NM_009267.1	NM_009267.1		20770	6678120	NM_009267.1	Spt1	NP_033293.1	ILMN_2681569	006060064	S	339	CGGGGATAATACCTCTGATCAGAACAGTGGCGTTGACAACACTGAAACGG	Un|NT_166442.1	-	39309-39358		Mus musculus salivary protein 1 (Spt1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC118102; MGC29130; Spt-1	MGC118102; MGC29130; Spt-1
Mus musculus	RefSeq	ILMN_201564	ILMN_201564	OLFR800	NM_146548.1	NM_146548.1		258541	22203788	NM_146548.1	Olfr800	NP_666759.1	ILMN_2613796	001710189	S	596	GTGCAGTGTTTACATTTATCATGACCCTTGTGTGTGTAAGCCTTTCCTAT	10	+	129097459-129097508	10qD3	Mus musculus olfactory receptor 800 (Olfr800), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR114-7	MOR114-7
Mus musculus	MEEBO	ILMN_223324	ILMN_223324	2700087H15RIK	scl070427.1_310	NM_027422.1			21312589	NM_027422.1	2700087H15Rik		ILMN_2762514	000360524	S	1321	TCGACCGTCCCTCGCCCCACCGAGGACACTGTGATGTGAGACTGCCTTTG										
Mus musculus	RefSeq	ILMN_211727	ILMN_228506	CPNE8	NM_025815.2	NM_025815.2		66871	76563926	NM_025815.2	Cpne8	NP_080091.1	ILMN_1241310	000510730	S	3008	ATGGCCTTAAATTCTCACAGAATTCCTGGAAATGATTGTGAATTGCCTTC	15	-	90318178-90318227	15qE3	Mus musculus copine VIII (Cpne8), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1200003E11Rik; 1500031E20Rik	1200003E11Rik; 1500031E20Rik
Mus musculus	Riken	ILMN_204239	ILMN_204239	GDA	ri|A830088F01|PX00156C14|AK044078|1354					AK044078	Gda		ILMN_1251900	006900634	S	964	TGGGTGGTGGTCATAGTGAGATCTAGTCACAGGTATTAGGGCAGGACTGC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: guanine + H2O = xanthine + NH3 [goid 8892] [evidence IEA]		
Mus musculus	Riken	ILMN_205397	ILMN_205397	E030024L06RIK	ri|E030024L06|PX00206C17|AK053170|1446					AK053170	E030024L06Rik		ILMN_1223164	004070255	S	1180	CCGATTTTATTTTGGACTGGGTCTCATTTATTTCGCCCCCCCCCCCCGAC										
Mus musculus	RefSeq	ILMN_209672	ILMN_209672	FBXO16	NM_015795.1	NM_015795.1		50759	7657078	NM_015795.1	Fbxo16	NP_056610.1	ILMN_2598074	000240315	S	873	CGAAGTGACCCCAGACTTCAAGCGCCAGCTGCGAGATAAGAAAAATAAGC	14	+	65921952-65922001	14qD1	Mus musculus F-box protein 16 (Fbxo16), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		Fbx16; 4932435C24Rik; MGC144594	Fbx16; 4932435C24Rik; MGC144594
Mus musculus	RefSeq	ILMN_213659	ILMN_238469	FNDC3A	NM_207636.2	NM_207636.2		319448	83745138	NM_207636.2	Fndc3a	NP_997519.2	ILMN_2639384	000150047	S	6036	AACTTCATACAAGTGAAAAAGTATAATCTCATAAGAATACATAAACTATG	14	-	72937810-72937859	14qD2	Mus musculus fibronectin type III domain containing 3A (Fndc3a), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized [goid 42598] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The process whose specific outcome is the progression of a Sertoli cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a Sertoli cell fate [goid 60009] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D14Ertd453e; Fndc3; 1700094E19Rik; sys; F730017H24Rik	D14Ertd453e; Fndc3; 1700094E19Rik; sys; F730017H24Rik
Mus musculus	RefSeq	ILMN_201437	ILMN_201437	LOC385161	XM_358094.1	XM_358094.1			38093711	XM_358094.1	LOC385161		ILMN_2542289	004900148	S	280	CTGGCTGAGTCTGTGCGGATGTACGGCTTACCTGACTCCTATATTGTGGC										
Mus musculus	RefSeq	ILMN_222488	ILMN_222488	LYSMD2	NM_027309.1	NM_027309.1		70082	21312529	NM_027309.1	Lysmd2	NP_081585.1	ILMN_1239808	005050129	S	812	GCCTGAAGTGATCAGCTCCCGGCTCTCTATAGTTAAGTCTTATTACGGCA	9	+	75423303-75423352	9qD	Mus musculus LysM, putative peptidoglycan-binding, domain containing 2 (Lysmd2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		AV033872; AW538442; 2210402C18Rik	AV033872; AW538442; 2210402C18Rik
Mus musculus	RefSeq	ILMN_208782	ILMN_208782	NQO2	NM_020282.2	NM_020282.2		18105	31981091	NM_020282.2	Nqo2	NP_064678.1	ILMN_2968729	006520288	S	842	AGCGGCTGAAGAGCATCTGGAAGGAAGAACCCATCCACTGCACACCCCCT	13	+	34077294-34077343	13qA3.3	Mus musculus NAD(P)H dehydrogenase, quinone 2 (Nqo2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 1-(beta-D-ribofuranosyl)-1,4-dihydronicotinamide + a quinone = 1-(beta-D-ribofuranosyl)nicotinamide + a hydroquinone [goid 1512] [evidence IEA]	Nmor2; Ox2; NMO2; Ox-2	Nmor2; Ox2; NMO2; Ox-2
Mus musculus	RefSeq	ILMN_208782	ILMN_208782	NQO2	NM_020282.2	NM_020282.2		18105	31981091	NM_020282.2	Nqo2	NP_064678.1	ILMN_2968731	000270187	S	708	CCGGTACTTCCTGTGGCCACTTCAGCATGGTACACTGCACTTCTGTGGAT	13	+	34074394-34074418:34077185-34077209	13qA3.3	Mus musculus NAD(P)H dehydrogenase, quinone 2 (Nqo2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 1-(beta-D-ribofuranosyl)-1,4-dihydronicotinamide + a quinone = 1-(beta-D-ribofuranosyl)nicotinamide + a hydroquinone [goid 1512] [evidence IEA]	Nmor2; Ox2; NMO2; Ox-2	Nmor2; Ox2; NMO2; Ox-2
Mus musculus	RefSeq	ILMN_208782	ILMN_208782	NQO2	NM_020282.2	NM_020282.2		18105	31981091	NM_020282.2	Nqo2	NP_064678.1	ILMN_1247930	006110014	S	542	CAGCAATCCTAAAAGGTTGGATGGATAGGGTGCTGTGCCGAGGGTTTGCC	13	+	34073319-34073368	13qA3.3	Mus musculus NAD(P)H dehydrogenase, quinone 2 (Nqo2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 1-(beta-D-ribofuranosyl)-1,4-dihydronicotinamide + a quinone = 1-(beta-D-ribofuranosyl)nicotinamide + a hydroquinone [goid 1512] [evidence IEA]	Nmor2; Ox2; NMO2; Ox-2	Nmor2; Ox2; NMO2; Ox-2
Mus musculus	RefSeq	ILMN_201448	ILMN_201448	LOC385181	XM_358104.1	XM_358104.1			38093922	XM_358104.1	LOC385181		ILMN_1255278	004220221	S	24	GGAGCACAGTGACACGATAGTAGACCAATGTTACACCCCAGTGAGCCCTG										
Mus musculus	RefSeq	ILMN_213132	ILMN_213132	EPHA1	NM_023580.2	NM_023580.2		13835	31980650	NM_023580.2	Epha1	NP_076069.2	ILMN_2972748	002120379	S	2776	CCAGCCTGAGTGGCTCTGATGGGATCCCTTATCGAAGTGTCTCTGAGTGG	6	-	42288630-42288679	6qB2.1	Mus musculus Eph receptor A1 (Epha1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Esk; 5730453L17Rik; AL033318; Eph	Esk; 5730453L17Rik; AL033318; Eph
Mus musculus	RefSeq	ILMN_215112	ILMN_215112	MED9	NM_138675.3	NM_138675.3		192191	84579900	NM_138675.3	Med9	NP_619616.2	ILMN_2655694	002940022	S	474	AAGGACTAGGCCAGCCCCCAGGAGAGCCGCCGCCAGACGGAAAGCATCAC	11	+	59774269-59774277:59774278-59774318	11qB1.3	Mus musculus mediator of RNA polymerase II transcription, subunit 9 homolog (yeast) (Med9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BC019367; Med25; FLJ10193; MGC30366	BC019367; Med25; FLJ10193; MGC30366
Mus musculus	RefSeq	ILMN_187590	ILMN_243158	MUSK	NM_001037130.1	NM_001037130.1		18198	82533048	NM_001037130.1	Musk	NP_001032207.1	ILMN_1259616	002370273	S	2570	GAGATGGCAACATCCTCGCCTGCCCTGAGAACTGCCCCTTGGAACTGTAC	4	+	58386422-58386471	4qB3	Mus musculus muscle, skeletal, receptor tyrosine kinase (Musk), transcript variant 5, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of synaptic growth at neuromuscular junctions [goid 8582] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IGI]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IGI]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IGI]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IMP]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mdk4; Mlk; Nsk2; MGC117677; Nsk1; Nsk3	Mdk4; Mlk; Nsk2; MGC117677; Nsk1; Nsk3
Mus musculus	RefSeq	ILMN_201127	ILMN_201127	LOC382015	XM_356084.1	XM_356084.1			38089307	XM_356084.1	LOC382015		ILMN_2541185	007050669	S	360	ACCCACCACAGTGGCAACCAACCTTCTGTGTTCTGCGTGGAGACGGACGT										
Mus musculus	RefSeq	ILMN_219672	ILMN_219672	YARS2	NM_198246.1	NM_198246.1		70120	39930578	NM_198246.1	Yars2	NP_937889.1	ILMN_2712064	000060743	S	1328	TCTAGTAATTGGACAACATATTCTCAAGAATGGACTTTCCTTACTTAAAA	16	+	16309491-16309540	16qA2	Mus musculus tyrosyl-tRNA synthetase 2 (mitochondrial) (Yars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling tyrosine to tyrosyl-tRNA, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6437] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + L-tyrosyl-tRNA(Tyr) [goid 4831] [evidence IEA]	2210023C10Rik; AW259696	2210023C10Rik; AW259696
Mus musculus	RefSeq	ILMN_198095	ILMN_245078	LOC637382	XM_913045.3	XM_913045.3		637382	149269012	XM_913045.3	LOC637382	XP_918138.3	ILMN_1252507	003940243	S	2224	GGTAAGCCAACTACAGCTTCCTGCATTCTACAGCAGACAACATTTGCAGT					PREDICTED: Mus musculus similar to putative pheromone receptor (LOC637382), mRNA.					
Mus musculus	RefSeq	ILMN_217392	ILMN_217392	EG218444	NM_177623.2	NM_177623.2		218444	31341409	NM_177623.2	EG218444	NP_808291.1	ILMN_2682702	002070196	S	534	CGCGCCGAGCTGTCATCGTAGTGTTCGAAAAGTGAGAACGCGGCAGGCAT	13	+	94175135-94175155:94175156-94175184	13qC3	Mus musculus predicted gene, EG218444 (EG218444), mRNA.				C920025J10	C920025J10
Mus musculus	RefSeq	ILMN_234629	ILMN_234629	EG625054	NR_003363.1	NR_003363.1		625054	126090591	NR_003363.1	EG625054		ILMN_2998173	001450689	S	1660	GGCAGTTGCTGTGGGAGTCATCAAAGCTGTGGACAAGAAGGCTGCTGGAG	17	-	79250175-79250224	17qE3	Mus musculus predicted gene, EG625054 (EG625054), non-coding RNA.					
Mus musculus	RefSeq	ILMN_222190	ILMN_222190	4930549C01RIK	NM_026300.2	NM_026300.2		67663	141802988	NM_026300.2	4930549C01Rik	NP_080576.1	ILMN_1232888	006620292	S	496	GGCATGACTCCACATTCTCCACCTTATCTAAATGTACTACCGTCACCCCC	4	+	136168954-136169003	4qD3	Mus musculus RIKEN cDNA 4930549C01 gene (4930549C01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_191684	ILMN_249927	CACNA1B	NM_007579.2	NM_007579.2		12287	110225365	NM_007579.2	Cacna1b	NP_031605.2	ILMN_2770304	001660433	S	6945	CCACCCCGATCAGGACCACTGGTGCTAGCTGCACCACGACCACCCATGTA	2	-	24462067-24462089:24462090-24462116	2qA3	Mus musculus calcium channel, voltage-dependent, N type, alpha 1B subunit (Cacna1b), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]	AW060892; alpha(1B); AW822256; Cav2.2; Cchn1a; AW050276	AW060892; alpha(1B); AW822256; Cav2.2; Cchn1a; AW050276
Mus musculus	MEEBO	ILMN_192578	ILMN_192578	SLC9A4	scl13743.1.1_122				45238582	NM_177084	Slc9a4		ILMN_2732246	001710543	S	2393	CAGCATACACTCAAGAGCAGGGTCCCTTCAGGAAAGGCGACAGACCCAGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198398	ILMN_198398	LOC381211	XM_355144.1	XM_355144.1			38084846	XM_355144.1	LOC381211		ILMN_2531545	001030202	S	126	CTCTCCACTCGATCTTAGGATAACTGCTAATGCCACCAACATTGTCTGTG										
Mus musculus	RefSeq	ILMN_189304	ILMN_189304	WNT10A	NM_009518.1	NM_009518.1		22409	6678586	NM_009518.1	Wnt10a	NP_033544.1	ILMN_2460094	006510053	S	2336	CCAGACCTCTGCTCCTGTCTTTCACTTAACAGATATTTATTTTTGCGCTC	1	+	74850621-74850670	1qC3	Mus musculus wingless related MMTV integration site 10a (Wnt10a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]		
Mus musculus	MEEBO	ILMN_195411	ILMN_195411	SLC13A5	scl41314.1.879_6				51921290	NM_001004148	Slc13a5		ILMN_1229923	006040296	S	19	TTAATCCTCCCCTTAACAGACCTGTGTGTAGTACCTGCTGTGCTAAGTCC						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of tricarboxylic acids into, out of, within or between cells [goid 6842] [evidence IDA]; The directed movement of succinate, the dianion of ethane dicarboxylic acid, into, out of, within or between cells [goid 15744] [evidence IDA]; The directed movement of citrate, 2-hydroxy-1,2,3-propanetricarboyxlate, into, out of, within or between cells [goid 15746] [evidence IDA]	Catalysis of the transfer of tricarboxylic acids from one side of the membrane to the other. Tricarboxylic acid are organic acids with three COOH groups [goid 15142] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of succinate, the dianion of ethane dicarboxylic acid, from one side of the membrane to the other [goid 15141] [evidence IDA]; Catalysis of the transfer of citrate, 2-hydroxy-1,2,3-propanetricarboyxlate, from one side of the membrane to the other [goid 15137] [evidence IDA]		
Mus musculus	MEEBO	ILMN_209162	ILMN_209162	B230339H12RIK	scl000584.1_64	NM_172282.1			26986588	NM_172282.1	B230339H12Rik		ILMN_2628744	003140411	S	1898	CCCCACCTTTGTGATCTATGAGTTGACGGTGCTGGTGTTCCTCACCCTGT										
Mus musculus	RefSeq	ILMN_196453	ILMN_236556	5830415F09RIK	NM_029086.2	NM_029086.2		74753	142347462	NM_029086.2	5830415F09Rik	NP_083362.1	ILMN_1223695	000380687	S	1149	TCGGTCTGTGTACCGCCGGAAGCTCTGCGAGGACCGCCTTTTCTTCTTCA	4	-	46393050-46393099	4qB1	Mus musculus RIKEN cDNA 5830415F09 gene (5830415F09Rik), mRNA. XM_976769			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RP23-423O7.7; AV014846	RP23-423O7.7; AV014846
Mus musculus	RefSeq	ILMN_204600	ILMN_311147	4932416K20RIK	XR_035332.1	XR_035332.1		442809	149259261	XR_035332.1	4932416K20Rik		ILMN_1248090	005910646	S	3340	GTGCGGAACTTCACACCCTCACCTCTCCAGATGCACAGAGACCTGTTGAG				8qD3	PREDICTED: Mus musculus RIKEN cDNA 4932416K20 gene (4932416K20Rik), misc RNA.					
Mus musculus	MEEBO	ILMN_209370	ILMN_209370	1110012O05RIK	scl066158.1_320				21313589	NM_024170	1110012O05Rik		ILMN_2595200	002140450	S	1119	TCCTTCTTGTCTGCTCTACCTGTACAGAAGCCTTTTCCTCACGTTGAATA										
Mus musculus	MEEBO	ILMN_187523	ILMN_187523	5430420E18RIK	scl1995.1.1_14						5430420E18Rik		ILMN_2444859	001510386	S	8	GCTGCACTGATACTGGTTTTATAGCCCAGGGAAAACAGCAAAATGGAGGC										
Mus musculus	MEEBO	ILMN_191830	ILMN_191830	RPS13	scl30771.2_110				13386033	NM_026533	Rps13		ILMN_2482591	001470671	S	20	TGCATTGTATGCAATTGGGTATTGTAGCGGTTTGGGGATAGCTCCAGTCA						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187527	ILMN_244371	RLF	NM_001081013.1	NM_001081013.1		109263	124486603	NM_001081013.1	Rlf	NP_001074482.1	ILMN_1244737	004730719	S	5277	GACTTGACAGGGAATGTTGTGGCAGATACCATAGTGAATGAGAGTGCCCC	4	-	120819236-120819285	4qD2.2	Mus musculus rearranged L-myc fusion sequence (Rlf), mRNA.				AI195322; 9230110M18Rik	AI195322; 9230110M18Rik
Mus musculus	RefSeq	ILMN_187527	ILMN_244371	RLF	NM_001081013.1	NM_001081013.1		109263	124486603	NM_001081013.1	Rlf	NP_001074482.1	ILMN_2444886	005820682	S	5743	CAGCAGTATTGGCGGCGTCCAGTAGCTTTCCAGTTGGTTTATTGATTGGG	4	-	120818770-120818819	4qD2.2	Mus musculus rearranged L-myc fusion sequence (Rlf), mRNA.				AI195322; 9230110M18Rik	AI195322; 9230110M18Rik
Mus musculus	RefSeq	ILMN_221916	ILMN_246143	AW549877	NM_145930.2	NM_145930.2		106064	52630433	NM_145930.2	AW549877	NP_666042.2	ILMN_1237132	004010021	S	4772	CGCTACTAACTTGGTCTGCTTGTAGATTGCTTGTCTCCTGGGGCCCCTTT	15	-	3932297-3932346	15qA1	Mus musculus expressed sequence AW549877 (AW549877), mRNA.				AI195826	AI195826
Mus musculus	RefSeq	ILMN_213232	ILMN_213232	CUEDC1	NM_198013.1	NM_198013.1		103841	37574103	NM_198013.1	Cuedc1	NP_932130.1	ILMN_1229454	001050020	S	1736	GGACTTAGAACTTTCAGAGCTGCTTATGATTGGAGGAGGGGCCTGGAGCC	11	+	88006395-88006417	11qC	Mus musculus CUE domain containing 1 (Cuedc1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-199A2.4; C330016O16Rik; AI841487	RP23-199A2.4; C330016O16Rik; AI841487
Mus musculus	RefSeq	ILMN_199774	ILMN_199774	LOC382994	XM_356788.1	XM_356788.1			38077210	XM_356788.1	LOC382994		ILMN_1219872	004830563	S	1034	ACTGTGCTACACCCTGGAGAGGTTCTTCTCTGCTCAGGTCCTTTGGGGGC										
Mus musculus	Riken	ILMN_203444	ILMN_203444	E130302K05RIK	ri|E130302K05|PX00092N24|AK053723|1028					AK053723	E130302K05Rik		ILMN_1241926	001710450	S	604	GCCCCGCCGTCTTCGCAAGAGTTCTCCGGCTTCAGAGGTGTTTGATTATC										
Mus musculus	RefSeq	ILMN_213780	ILMN_213780	IL6	NM_031168.1	NM_031168.1		16193	13624310	NM_031168.1	Il6	NP_112445.1	ILMN_1243601	005670731	S	946	CTGTTACCTAGCCAGATGGTTTCTTGGAATGTATAAGTTTACCTCAATGA	5	+	30346367-30346416	5qB1	Mus musculus interleukin 6 (Il6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation [goid 45630] [evidence IDA]; Reactions triggered in response to the presence of a protozoan that act to protect the cell or organism [goid 42832] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45079] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45079] [evidence IMP]; The process of apoptosis in neutrophils [goid 1781] [evidence IDA]; The process of apoptosis in neutrophils [goid 1781] [evidence IMP]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IDA]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the interleukin-6 receptor [goid 5138] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	Il-6	Il-6
Mus musculus	RefSeq	ILMN_223170	ILMN_223170	B9D2	NM_172148.1	NM_172148.1		232987	26024310	NM_172148.1	B9d2	NP_742160.1	ILMN_2760226	000010717	S	952	GGAGGGACATGAGCAGGGCCCACTGTTTGGACTGTCGGGGGCACTTAATA	7	+	26471508-26471557	7qA3	Mus musculus B9 protein domain 2 (B9d2), mRNA.				MGC41256	MGC41256
Mus musculus	MEEBO	ILMN_210652	ILMN_210652	1700010M22RIK	scl0066328.1_325	NM_025490.1			21313521	NM_025490.1	1700010M22Rik		ILMN_2607827	002100195	S	690	GCTGATGTGTACCTTTGCTGGGATCCGGAATAGTAAAAAGTGTTGGAGTG							The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	 [goid 5498] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223824	ILMN_315251	LOC100048299	XM_001479961.1	XM_001479961.1		100048299	149263207	XM_001479961.1	LOC100048299	XP_001480011.1	ILMN_1233187	003360402	S	1611	TCCTGGAACTTGTCGCCACTGTGTGATCCAGTCCTGGCTCTGGCTGTGGT					PREDICTED: Mus musculus similar to Myn protein - mouse (LOC100048299), mRNA.					
Mus musculus	RefSeq	ILMN_198910	ILMN_198910	LOC331089	XM_285648.1	XM_285648.1			28548974	XM_285648.1	LOC331089		ILMN_2533364	006900382	S	241	TCAAGAGCAGTCTGGTTCAGGCCTAGGAAAGCCTCCCCAGTGCCCGAAGT										
Mus musculus	RefSeq	ILMN_217425	ILMN_217425	SLC7A3	NM_007515.2	NM_007515.2		11989	118131076	NM_007515.2	Slc7a3	NP_031541.1	ILMN_1257987	006350349	S	2189	CCCCACGAAGAGCTGGGCCTCTCATGTGGTGTTAGTGACGGATATGAAAT	X	-	98274692-98274741	XqC3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 (Slc7a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of, within or between cells [goid 15819] [evidence IDA]	Catalysis of the transfer of a positively charged amino acid from one side of the membrane to the other [goid 15326] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid [goid 15189] [evidence IDA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	SLC7A1; Atrc3; SLC7A2; CAT3	SLC7A1; Atrc3; SLC7A2; CAT3
Mus musculus	RefSeq	ILMN_217425	ILMN_217425	SLC7A3	NM_007515.2	NM_007515.2		11989	118131076	NM_007515.2	Slc7a3	NP_031541.1	ILMN_1212906	001690348	S	140	TCGTAGCCTAGCCGGAGGAGGTGGGGAACATTTGCTTTCTCCGAGGGCAA	X	-	98280209-98280258	XqC3	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 (Slc7a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of, within or between cells [goid 15819] [evidence IDA]	Catalysis of the transfer of a positively charged amino acid from one side of the membrane to the other [goid 15326] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid [goid 15189] [evidence IDA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	SLC7A1; Atrc3; SLC7A2; CAT3	SLC7A1; Atrc3; SLC7A2; CAT3
Mus musculus	RefSeq	ILMN_196168	ILMN_196168	ZBED3	NM_028106.2	NM_028106.2		72114	142354003	NM_028106.2	Zbed3	NP_082382.1	ILMN_1214132	001740161	S	1757	GGACAAATCACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTG	13	+	96107659-96107708	13qD1	Mus musculus zinc finger, BED domain containing 3 (Zbed3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2610005H11Rik; 0610037K01Rik; AU024588; AU018975	2610005H11Rik; 0610037K01Rik; AU024588; AU018975
Mus musculus	RefSeq	ILMN_222812	ILMN_244906	6330403A02RIK	NM_001081227.1	NM_001081227.1		381310	124487002	NM_001081227.1	6330403A02Rik	NP_001074696.1	ILMN_2755179	006550468	S	2395	AGCTGTACCAGAAAGGGGACTGATGGGTCAGTGTGCCCTCCCACGATGTC	1	-	182366616-182366665	1qH4	Mus musculus RIKEN cDNA 6330403A02 gene (6330403A02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			R75555	R75555
Mus musculus	RefSeq	ILMN_197043	ILMN_244906	6330403A02RIK	NM_001081227.1	NM_001081227.1		381310	124487002	NM_001081227.1	6330403A02Rik	NP_001074696.1	ILMN_1217350	004200711	S	417	GCACCGACCTCCCGGACAGGCACGTGTGCTGCGTCTTCTGGCTGAATATC	1	-	182372765-182372814	1qH4	Mus musculus RIKEN cDNA 6330403A02 gene (6330403A02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			R75555	R75555
Mus musculus	RefSeq	ILMN_189556	ILMN_241356	CDKN2A	NM_001040654.1	NM_001040654.1		12578	98986446	NM_001040654.1	Cdkn2a	NP_001035744.1	ILMN_1227342	000380632	S	147	ACTGCTGGAAGCCGGGGTTTCGCCCAACGCCCCGAACTCTTTCGGTCGTA	4	-	88927900-88927949	4qC4	Mus musculus cyclin-dependent kinase inhibitor 2A (Cdkn2a), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]; A structure found in the nucleolus, which contains nearly completed preribosomal particles destined for the cytoplasm [goid 1652] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity, the catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 51444] [evidence IDA]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33088] [evidence IMP]; Any process that activates, maintains or increases the rate of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 43517] [evidence IC ]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Stops, prevents or reduces the activity of a ubiquitin-protein ligase [goid 55105] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p16; MTS1; p16(INK4a); Arf; p16INK4a; Pctr1; INK4a-ARF; ARF-INK4a; p19ARF	p16; MTS1; p16(INK4a); Arf; p16INK4a; Pctr1; INK4a-ARF; ARF-INK4a; p19ARF
Mus musculus	RefSeq	ILMN_260633	ILMN_260633	LOC433801	NM_001013808.1	NM_001013808.1		433801	85701493	NM_001013808.1	LOC433801	NP_001013830.1	ILMN_3023451	006200386	I	2432	CTGAGTATGAGTCTCTTGTGATCTGGTCAACAACTCCTTTCCTATTGTCC				4qE1	Mus musculus similar to RIKEN cDNA 6330416L07 gene (LOC433801), mRNA.					
Mus musculus	RefSeq	ILMN_260633	ILMN_260633	LOC433801	NM_001013808.1	NM_001013808.1		433801	85701493	NM_001013808.1	LOC433801	NP_001013830.1	ILMN_3095859	000290253	A	800	ACCTTACAGAAGTAGTAAAAGTGACAAATGCTTTACCCATCAGATCCATC	4	+	144889453-144889502	4qE1	Mus musculus similar to RIKEN cDNA 6330416L07 gene (LOC433801), mRNA.					
Mus musculus	RefSeq	ILMN_210103	ILMN_210103	TMEM68	NM_028097.3	NM_028097.3		72098	133892404	NM_028097.3	Tmem68	NP_082373.1	ILMN_2602257	004830458	S	2241	GCAGTATGTCTGTCTCCTACCACCTTTGTATACTTGGGTTTTATATGGAC	4	-	3476502-3476551	4qA1	Mus musculus transmembrane protein 68 (Tmem68), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	2010300G19Rik; AA408325; AW123402	2010300G19Rik; AA408325; AW123402
Mus musculus	RefSeq	ILMN_239396	ILMN_239396	PRMT2	NM_001077638.1	NM_001077638.1		15468	117938281	NM_001077638.1	Prmt2	NP_001071106.1	ILMN_3099751	006580731	A	1784	CAGCCTGTGTACCTGTGACTGTGATGTCCGCATCTTGTGTCAGTGGTGTC	10	-	75678800-75678849	10qC1	Mus musculus protein arginine N-methyltransferase 2 (Prmt2), transcript variant 2, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC148245; Hrmt1l1; MGC148246; AI504737	MGC148245; Hrmt1l1; MGC148246; AI504737
Mus musculus	RefSeq	ILMN_223892	ILMN_239396	PRMT2	NM_001077638.1	NM_001077638.1		15468	117938281	NM_001077638.1	Prmt2	NP_001071106.1	ILMN_1216953	004900592	S	1840	GCCCTTGGCTAGCTGCTGTATACCTGTGGACTGTGACTTGCAGAGCTGTG	10	-	75678744-75678793	10qC1	Mus musculus protein arginine N-methyltransferase 2 (Prmt2), transcript variant 2, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC148245; Hrmt1l1; MGC148246; AI504737	MGC148245; Hrmt1l1; MGC148246; AI504737
Mus musculus	RefSeq	ILMN_201525	ILMN_318408	LOC100046393	XM_001476699.1	XM_001476699.1		100046393	149246595	XM_001476699.1	LOC100046393	XP_001476749.1	ILMN_2746766	004610193	S	1993	CAGCAGTACCAGTGCCAAATAAAGATCAGCTCCCCCTGCTGGGCGGTCGT					PREDICTED: Mus musculus similar to Protein phosphatase 2, regulatory subunit B (B56), alpha (LOC100046393), mRNA.					
Mus musculus	MEEBO	ILMN_213558	ILMN_213558	EYA4	scl014051.2_30	NM_010167.1			6753795	NM_010167.1	Eya4		ILMN_1259450	002450328	S	1926	CCTGCTCTACAGCCTAGGAGGTGCTTTCCCCATTGAGAACATTTACAGCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199611	ILMN_199611	LOC383738	XM_357217.1	XM_357217.1			38075015	XM_357217.1	LOC383738		ILMN_2535846	004590367	S	634	TCTCAGAAATTACAAGACTGGCCGGGGAAACGGGGTCCTGTGGAGATGTC										
Mus musculus	RefSeq	ILMN_217415	ILMN_253052	EG432448	XM_890293.3	XM_890293.3		432448	149260700	XM_890293.3	EG432448	XP_895386.2	ILMN_2741950	000780446	S	2465	TGGTAGCCGCCATGCAGCCTCGGATGCTGGTTACATTTGATGAGGAGCTG	10	+	30970419-30970468	10qA4	PREDICTED: Mus musculus predicted gene, EG432448, transcript variant 1 (EG432448), mRNA.					
Mus musculus	RefSeq	ILMN_233668	ILMN_233668	ETS1	NM_001038642.1	NM_001038642.1		23871	84579949	NM_001038642.1	Ets1	NP_001033731.1	ILMN_3157483	006020398	A	4218	CTCTCTCCTAGCCATGCTGTGCATGCGGCCTTCTCTGTTGGGGTCTATAT	9	+	32564824-32564873	9qA4	Mus musculus E26 avian leukemia oncogene 1, 5' domain (Ets1), transcript variant 2, mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	MGC130355; AI448617; AI196000; MGC18571; D230050P06; Tpl1; Ets-1	MGC130355; AI448617; AI196000; MGC18571; D230050P06; Tpl1; Ets-1
Mus musculus	RefSeq	ILMN_212168	ILMN_233668	ETS1	NM_001038642.1	NM_001038642.1		23871	84579949	NM_001038642.1	Ets1	NP_001033731.1	ILMN_2770739	005340630	S	1113	ACTCACTGATAAGTCTTGTCAGTCCTTTATCAGCTGGACAGGAGATGGCT	9	+	32560424-32560473	9qA4	Mus musculus E26 avian leukemia oncogene 1, 5' domain (Ets1), transcript variant 2, mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	MGC130355; AI448617; AI196000; MGC18571; D230050P06; Tpl1; Ets-1	MGC130355; AI448617; AI196000; MGC18571; D230050P06; Tpl1; Ets-1
Mus musculus	RefSeq	ILMN_219118	ILMN_246945	1700125H20RIK	XM_908592.2	XM_908592.2		73634	94390595	XM_908592.2	1700125H20Rik	XP_913685.1	ILMN_1214957	004920026	S	857	GAGGATGAAGGGGTTGAAGAGGGTAAAGAAGGTTTACTTCATCAAAAGGA				11qC	PREDICTED: Mus musculus RIKEN cDNA 1700125H20 gene, transcript variant 3 (1700125H20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_184649	ILMN_249545	BB146404	NM_178908.3	NM_178908.3		103511	125660461	NM_178908.3	BB146404	NP_849239.2	ILMN_1245328	005820239	S	1582	GCTGTGGGTGATAGGTACTTATACCATCACAGGACAATTTCTACATTCAA	10	-	33811312-33811361	10qB1	Mus musculus expressed sequence BB146404 (BB146404), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_207072	ILMN_207072	9330131P21RIK	ri|9330131P21|PX00652G03|AK079067|3671					AK079067	9330131P21Rik		ILMN_1241342	002750605	S	3136	CCTCCACAGAGGTAGAGACCACATCCTGTAACCTGGGACTGAAGTAGTTG										
Mus musculus	Riken	ILMN_205946	ILMN_205946	SYN3	ri|C130092J18|PX00172I11|AK048643|4006					AK048643	Syn3		ILMN_1226682	000160706	S	3904	CCCAGCACAGGGGAGACAGAGACAGGAGGATTCTGGGGCTTGTTGGCTAG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	MEEBO	ILMN_218992	ILMN_218992	2010209O12RIK	scl00100910.1_246	NM_133913.1			29789338	NM_133913.1	2010209O12Rik		ILMN_2702868	000070382	S	2265	CTCTGGAGTTGGAGCGGGCTTACAGCGAAATAGAACAACTGCAGGCCCAG										
Mus musculus	RefSeq	ILMN_216525	ILMN_216525	OLFR513	NM_146723.1	NM_146723.1		258718	22129390	NM_146723.1	Olfr513	NP_666934.1	ILMN_2672104	003610349	S	765	CATGTACATGCGGCAACCAAAAACTGGGAGTTCGTGGAAGTATAGCAAAG	7	+	115899136-115899185	7qE3	Mus musculus olfactory receptor 513 (Olfr513), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR195-1; MGC130300; MGC130301	MOR195-1; MGC130300; MGC130301
Mus musculus	RefSeq	ILMN_219948	ILMN_319324	LOC100047837	XM_001478863.1	XM_001478863.1		100047837	149257398	XM_001478863.1	LOC100047837	XP_001478913.1	ILMN_1251160	006480543	S	2015	GTACCCATATATAATTCTTCCACATTAGCCTGCAGAAACCTAGGGGGCCC					PREDICTED: Mus musculus similar to Myocyte enhancer factor 2A (LOC100047837), mRNA.					
Mus musculus	RefSeq	ILMN_190107	ILMN_319324	LOC100047837	XM_001478863.1	XM_001478863.1		100047837	149257398	XM_001478863.1	LOC100047837	XP_001478913.1	ILMN_1221253	006130202	S	4290	CAGGACAACTACTGTTTTCTAAAGGAATATTACACGAGGCTCGGAGTTTG					PREDICTED: Mus musculus similar to Myocyte enhancer factor 2A (LOC100047837), mRNA.					
Mus musculus	RefSeq	ILMN_190107	ILMN_319324	LOC100047837	XM_001478863.1	XM_001478863.1		100047837	149257398	XM_001478863.1	LOC100047837	XP_001478913.1	ILMN_1248647	001850687	S	1675	CATGGGTGACCTAAGGCTTCCTGGTTCATGTTTGTTCTTTGTGTTACTGC					PREDICTED: Mus musculus similar to Myocyte enhancer factor 2A (LOC100047837), mRNA.					
Mus musculus	RefSeq	ILMN_217330	ILMN_316275	KLRC2	NM_001098669.1	NM_001098669.1		16642	148886721	NM_001098669.1	Klrc2	NP_001092139.1	ILMN_1243869	004210554	S	130	AGGAGATCGCCTGCTGGAGTTTAGCCTTCAACATGCTTCCCAGAAGCATC				6qF3	Mus musculus killer cell lectin-like receptor subfamily C, member 2 (Klrc2), transcript variant 2, mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NKG2C	NKG2C
Mus musculus	Riken	ILMN_203412	ILMN_203412	A030004P03RIK	ri|A030004P03|PX00063G11|AK037169|1928					AK037169	A030004P03Rik		ILMN_2557110	006400730	S	1373	GCAGGCGTGGTGGCGCCTTCTGTTCCTTTTGCTGCTTTATTTGCATGAGG										
Mus musculus	MEEBO	ILMN_185933	ILMN_185933	MJ-5000-147_398	MJ-5000-147_398						MJ-5000-147_398		ILMN_2431228	003180471	S	14	GTCCGGGAGGAAAGAGAACTGGATACATGAGACCTGAAACAGCACAGGGA										
Mus musculus	RefSeq	ILMN_213417	ILMN_213417	DPF2	NM_011262.3	NM_011262.3		19708	153791778	NM_011262.3	Dpf2	NP_035392.1	ILMN_1216791	006280754	S	2323	TCGCATATTTAGTTCCTGTATTCAAAACATTAGTAAAAATAAACATTTTT				19qA	Mus musculus D4, zinc and double PHD fingers family 2 (Dpf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2210010M07Rik; ubi-d4; Req	2210010M07Rik; ubi-d4; Req
Mus musculus	MEEBO	ILMN_187746	ILMN_187746	IGH-V10	scl0016050.1_4						Igh-V10		ILMN_2446772	004490348	S	20	TCCTTACTTTAAAAGGTGTCCAGTGTGACGTAAACCTGGTGGAGTCTGGG										
Mus musculus	RefSeq	ILMN_188485	ILMN_188485	YPEL3	NM_025347.2	NM_025347.2		66090	134053931	NM_025347.2	Ypel3	NP_079623.1	ILMN_2453076	007100725	S	684	CATTTTATTGCATGCACTGTGACCTTGGGGGGAGACAAAGAGGGGGATTG	7	+	133923759-133923808	7qF3	Mus musculus yippee-like 3 (Drosophila) (Ypel3), mRNA.				0610043B10Rik; Suap; 1190001G19Rik	0610043B10Rik; Suap; 1190001G19Rik
Mus musculus	RefSeq	ILMN_242334	ILMN_242334	ARHGAP6	NM_178754.2	NM_178754.2		11856	118130616	NM_178754.2	Arhgap6	NP_848869.1	ILMN_3120194	007100246	A	3329	CAGGTGGGACCCAAGAGTACTTAAGAGAGTTTCTATTCCACTCTAGGTCA	X	+	165741661-165741710	XqF5	Mus musculus Rho GTPase activating protein 6 (Arhgap6), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]	AI504284; RhoGAPX-1; C130038E13	AI504284; RhoGAPX-1; C130038E13
Mus musculus	RefSeq	ILMN_249874	ILMN_249874	CCL20	NM_016960.1	NM_016960.1		20297	8394247	NM_016960.1	Ccl20	NP_058656.1	ILMN_2781178	004290523	S	678	AGATATTTAATGTTCTGTTTATTTAATTGCTTCTTAAATTGATATGATTT	1	+	83115634-83115683	1qC5	Mus musculus chemokine (C-C motif) ligand 20 (Ccl20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	exodus-1; MIP3A; CKb4; MIP-3A; Scya20; MIP-3[a]; LARC; ST38	exodus-1; MIP3A; CKb4; MIP-3A; Scya20; MIP-3[a]; LARC; ST38
Mus musculus	RefSeq	ILMN_221354	ILMN_221354	DIMT1	NM_025447.3	NM_025447.3		66254	146135001	NM_025447.3	Dimt1	NP_079723.1	ILMN_2734408	001660026	S	1849	TACCTGGTGTTTCTTTTTAAGCTATTTAAAAATTGTCAGATAAAAGATAA				13qD2.1	Mus musculus DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) (Dimt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor [goid 179] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to an adenine residue in an rRNA molecule [goid 16433] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule [goid 8649] [evidence IEA]	1500031M22Rik; AV111347	1500031M22Rik; AV111347
Mus musculus	Riken	ILMN_203191	ILMN_203191	A930012E17RIK	ri|A930012E17|PX00066D23|AK044427|3230					AK044427	A930012E17Rik		ILMN_2555412	004050577	S	2884	TGCTTATCACCGATGGGGCTGTGGAAGACTATGAGCCCGTGTTTGAGACC										
Mus musculus	MEEBO	ILMN_195063	ILMN_195063	DDC	scl40512.21.1_20				22094148	NM_016672	Ddc		ILMN_2628647	000610601	S	1321	CATGTCGTCTCCGAGACAAGTTTGTGCTACGCTTTGCTGTGTGCGCTCGC							The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 42423] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids, as carried out by individual cells [goid 6519] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-tryptophan = tryptamine + CO2 [goid 4058] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201557	ILMN_312875	WDR89	XM_001479426.1	XM_001479426.1		72338	149263163	XM_001479426.1	Wdr89	XP_001479476.1	ILMN_2542885	002260575	S	2523	TGCAGCAGAGGAGAAGAAAGATGAGAAGAAGGAGGAGTCCGAGGAGTCGG				12qC3	PREDICTED: Mus musculus WD repeat domain 89, transcript variant 2 (Wdr89), mRNA.					
Mus musculus	RefSeq	ILMN_197328	ILMN_197328	LOC381386	XM_355349.1	XM_355349.1			38075160	XM_355349.1	LOC381386		ILMN_1226382	006480719	S	905	GGTGCTATCCAGGTGTTAATGAAGAAGCTGGAGGAGGCAGGGTGCCGGGA										
Mus musculus	RefSeq	ILMN_243499	ILMN_243499	RPL38	NM_001048057.1	NM_001048057.1		67671	114205443	NM_001048057.1	Rpl38	NP_001041522.1	ILMN_3135931	002510707	A	295	ACCCCCGGGTTTGGCAGTGAAGGATCTGAAATGAACCAGCCCTCTGCGTG	11	+	114533163-114533170:114533579-114533604:114533605-114533620	11qE2	Mus musculus ribosomal protein L38 (Rpl38), transcript variant 1, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610025G13Rik	0610025G13Rik
Mus musculus	RefSeq	ILMN_209349	ILMN_243499	RPL38	NM_001048057.1	NM_001048057.1		67671	114205443	NM_001048057.1	Rpl38	NP_001041522.1	ILMN_2594971	005260288	S	10	TTAACCGTCCGGAAGCGGAAGCCTCGTTCTTTCCCCGTTCTCTTCGGTTC	11	+	114529866-114529915	11qE2	Mus musculus ribosomal protein L38 (Rpl38), transcript variant 1, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610025G13Rik	0610025G13Rik
Mus musculus	RefSeq	ILMN_197889	ILMN_197889	LOC333621	XM_289715.2	XM_289715.2			38079188	XM_289715.2	LOC333621		ILMN_2529717	006290639	S	945	CACCTTGTGCGTCAAGGAGGCCCAGAGGCTCTATCCAACAGTACCATCTG										
Mus musculus	MEEBO	ILMN_190756	ILMN_190756	4930482J15RIK	scl078008.2_54						4930482J15Rik		ILMN_1214570	003830685	S	3	CTCAGTTCTTACATTTGACCTTTTGGCGTCATGGCCGCCTGAGGGGACAG										
Mus musculus	RefSeq	ILMN_245104	ILMN_245104	ATP5L	NM_013795.4	NM_013795.4		27425	47058957	NM_013795.4	Atp5l	NP_038823.2	ILMN_2973897	005870446	S	1	CGGACGCGTGGGTTCAGCCGGCGGTTCGGGGAGACGTACCTTCCACCTTA	9	-	44728731-44728744:44728745-44728780	9qA5.2	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g (Atp5l), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [evidence ISA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence ISA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence ISA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	4933437C06Rik; MGC107547; MGC107313	4933437C06Rik; MGC107547; MGC107313
Mus musculus	RefSeq	ILMN_219176	ILMN_245104	ATP5L	NM_013795.4	NM_013795.4		27425	47058957	NM_013795.4	Atp5l	NP_038823.2	ILMN_2705268	001300341	S	23	GGTTCGGGGAGACGTACCTTCCACCTTAGACCATGGCCAAGTTCATCCGT	9	-	44728709-44728744:44728745-44728758	9qA5.2	Mus musculus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g (Atp5l), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [evidence ISA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence ISA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence ISA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	4933437C06Rik; MGC107547; MGC107313	4933437C06Rik; MGC107547; MGC107313
Mus musculus	RefSeq	ILMN_219309	ILMN_219309	SIRT5	NM_178848.3	NM_178848.3		68346	118130585	NM_178848.3	Sirt5	NP_849179.1	ILMN_2707079	003440592	S	1008	CAGTACGGTATCCTGGAGTGCTAAAGCAGGGCACTAACGGGAAAAATGGC	13	+	43490211-43490260	13qA4	Mus musculus sirtuin 5 (silent mating type information regulation 2 homolog) 5 (S. cerevisiae) (Sirt5), mRNA.	Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1500032M05Rik; AV001953; 0610012J09Rik	1500032M05Rik; AV001953; 0610012J09Rik
Mus musculus	RefSeq	ILMN_219309	ILMN_219309	SIRT5	NM_178848.3	NM_178848.3		68346	118130585	NM_178848.3	Sirt5	NP_849179.1	ILMN_2711045	005890619	S	1001	GGACCTGCAGTACGGTATCCTGGAGTGCTAAAGCAGGGCACTAACGGGAA	13	+	43490204-43490253	13qA4	Mus musculus sirtuin 5 (silent mating type information regulation 2 homolog) 5 (S. cerevisiae) (Sirt5), mRNA.	Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1500032M05Rik; AV001953; 0610012J09Rik	1500032M05Rik; AV001953; 0610012J09Rik
Mus musculus	RefSeq	ILMN_210072	ILMN_239010	PNMAL1	NM_001007569.1	NM_001007569.1		71691	56119167	NM_001007569.1	Pnmal1	NP_001007570.1	ILMN_2601928	005550100	S	1222	CTCTCTCCTATGTCCTGCTTGATGCTGAAGCCACCAAGAACAAAACAGCG	7	+	17546682-17546731	7qA2	Mus musculus PNMA-like 1 (Pnmal1), mRNA.				MGC54820	MGC54820
Mus musculus	RefSeq	ILMN_220650	ILMN_220650	STAC3	NM_177707.3	NM_177707.3		237611	141803518	NM_177707.3	Stac3	NP_808375.1	ILMN_2724841	001990437	S	1546	ACTGGATGAGGAGGGTCGGAAAGGCCCACCAGAGCATAATGACGTTTCTG	10	+	126945627-126945676	10qD3	Mus musculus SH3 and cysteine rich domain 3 (Stac3), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	9830125E18	9830125E18
Mus musculus	RefSeq	ILMN_185317	ILMN_329305	LOC100046496	XM_001476320.1	XM_001476320.1		100046496	149255584	XM_001476320.1	LOC100046496	XP_001476370.1	ILMN_1229263	003780368	S	263	ACCTTGCCTCAGGAGTCCCAGACAGGTTCAGTAGCAGTGGGTCAGGAACT					PREDICTED: Mus musculus similar to Ig kappa V-region 24B (LOC100046496), mRNA.					
Mus musculus	RefSeq	ILMN_210941	ILMN_233015	TESP1	NM_009355.2	NM_009355.2		21755	118130424	NM_009355.2	Tesp1	NP_033381.1	ILMN_2770137	002680162	S	1094	CCCTCCTCCTGCAATCGATTTGGCTCAGGATTCTGTGATTTGTCTACTGG	1	+	34559755-34559792:34559793-34559804	1qB	Mus musculus testicular serine protease 1 (Tesp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]	MGC144580; MGC144581	MGC144580; MGC144581
Mus musculus	RefSeq	ILMN_214434	ILMN_214434	RG9MTD2	NM_175389.4	NM_175389.4		108943	118129871	NM_175389.4	Rg9mtd2	NP_780598.2	ILMN_1222171	001110072	S	2171	GCTCCAGGGGCTCTCATTGGTCTTTTCTCTTTATGATACAATGTGTGCGC	3	+	137821021-137821070	3qG3	Mus musculus RNA (guanine-9-) methyltransferase domain containing 2 (Rg9mtd2), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	3110023L08Rik; MGC116571; MGC107421; AA794508; Rnmtd2	3110023L08Rik; MGC116571; MGC107421; AA794508; Rnmtd2
Mus musculus	Riken	ILMN_202497	ILMN_202497	1500005N04RIK	ri|1500005N04|ZX00042I03|AK005166|1192					AK005166	1500005N04Rik		ILMN_1214120	006280220	S	882	CTGAGAAGGACAAAAGGCTTGGCTCACCCACCATGCAGGCTTGTGGAAGC										
Mus musculus	RefSeq	ILMN_219058	ILMN_219058	VPS25	NM_026776.3	NM_026776.3		28084	31981981	NM_026776.3	Vps25	NP_081052.2	ILMN_1259848	004860181	S	506	TCACTGTCAGCGATGGCCGAGGAGTCAAGTTCTTCTAGCAGAGACCTGGC	11	+	101120299-101120336:101120337-101120348	11qD	Mus musculus vacuolar protein sorting 25 (yeast) (Vps25), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		D11Wsu68e; AW107467; 1110020N13Rik	D11Wsu68e; AW107467; 1110020N13Rik
Mus musculus	RefSeq	ILMN_219058	ILMN_219058	VPS25	NM_026776.3	NM_026776.3		28084	31981981	NM_026776.3	Vps25	NP_081052.2	ILMN_3000008	001660037	S	697	CCCTTTATTTCTGTCCCTGGGATAGAGTAAGCCCACAGTGCCACGGAGAA	11	+	101120490-101120539	11qD	Mus musculus vacuolar protein sorting 25 (yeast) (Vps25), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		D11Wsu68e; AW107467; 1110020N13Rik	D11Wsu68e; AW107467; 1110020N13Rik
Mus musculus	RefSeq	ILMN_214029	ILMN_214029	SALL1	NM_021390.2	NM_021390.2		58198	45598370	NM_021390.2	Sall1	NP_067365.1	ILMN_2643443	000430050	S	4039	CCCGCCCTTTACCTTCTGGCCCCTGGGACTATGAACTACACTATGAAGAC	8	-	91552172-91552221	8qC3	Mus musculus sal-like 1 (Drosophila) (Sall1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Signaling at short range between cells of different ancestry and developmental potential that results in one cell or group of cells effecting a developmental change in the other. This is often done by secretion of proteins by one cell which affects the neighboring cells and causes them to adopt a certain fate [goid 31129] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Msal-3	Msal-3
Mus musculus	RefSeq	ILMN_214029	ILMN_214029	SALL1	NM_021390.2	NM_021390.2		58198	45598370	NM_021390.2	Sall1	NP_067365.1	ILMN_2853800	005550598	S	3977	GCTAAAGCTGCCAGAGTGCTTCCTCTCAGAATGTCGCCCCGAGGTTGCCT	8	-	91552234-91552276:91552277-91552283	8qC3	Mus musculus sal-like 1 (Drosophila) (Sall1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Signaling at short range between cells of different ancestry and developmental potential that results in one cell or group of cells effecting a developmental change in the other. This is often done by secretion of proteins by one cell which affects the neighboring cells and causes them to adopt a certain fate [goid 31129] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Msal-3	Msal-3
Mus musculus	RefSeq	ILMN_212909	ILMN_212909	RGMB	NM_178615.3	NM_178615.3		68799	32490564	NM_178615.3	Rgmb	NP_848730.2	ILMN_2941052	007320551	S	2450	GGAGGTGGCCATTTCAAGTAAATACCAGGCATCTTGCTGTGCCCCAGCTG	17	-	15943350-15943399	17qA2	Mus musculus RGM domain family, member B (Rgmb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	1110059F19Rik; DRAGON	1110059F19Rik; DRAGON
Mus musculus	RefSeq	ILMN_212909	ILMN_212909	RGMB	NM_178615.3	NM_178615.3		68799	32490564	NM_178615.3	Rgmb	NP_848730.2	ILMN_1235522	004070369	S	1822	TATTGTCATAATATATTGAGTGAAAAAGTATATATGTATATACCATGTAT	17	-	15943978-15944027	17qA2	Mus musculus RGM domain family, member B (Rgmb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	1110059F19Rik; DRAGON	1110059F19Rik; DRAGON
Mus musculus	RefSeq	ILMN_212909	ILMN_212909	RGMB	NM_178615.3	NM_178615.3		68799	32490564	NM_178615.3	Rgmb	NP_848730.2	ILMN_2941058	000670685	S	2515	CCTCTATCCCGGTGTAAATTGTAGTTTCCCCTCCATTAACTCTTTAAGCA	17	-	15943285-15943334	17qA2	Mus musculus RGM domain family, member B (Rgmb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	1110059F19Rik; DRAGON	1110059F19Rik; DRAGON
Mus musculus	MEEBO	ILMN_185726	ILMN_185726	4933439C10RIK	scl0074476.1_306						4933439C10Rik		ILMN_2429484	005700377	S	9	CCTGCAGCCTGAAGGGTTCTATTTTCCTTTAGTGACCTTCACTCAGACCA										
Mus musculus	RefSeq	ILMN_212221	ILMN_212221	HES5	NM_010419.4	NM_010419.4		15208	145966833	NM_010419.4	Hes5	NP_034549.1	ILMN_2624153	004560095	S	744	TGTGTGCAGAGTTGTCATTTGGGGATAATCAGGGCCCACCCTCTGCCGCC				4qE2	Mus musculus hairy and enhancer of split 5 (Drosophila) (Hes5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into an auditory hair cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 42668] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199717	ILMN_199717	NBEA	XM_355400.1	XM_355400.1			38076501	XM_355400.1	Nbea		ILMN_1213305	000010273	S	1576	CAGGAGAGCTTAACTGAACATCCCAGTGAAATGCTGAAGCCTGCACCGTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence NAS]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISS]; The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles [goid 6892] [evidence NAS]	Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence NAS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]		
Mus musculus	RefSeq	ILMN_187491	ILMN_317572	HERC1	XM_001477062.1	XM_001477062.1		235439	149260053	XM_001477062.1	Herc1	XP_001477112.1	ILMN_1243907	001230220	S	10596	CCTGGAGTATCAGTGGCAAATACCTTGCTGGGGCTTTGGAGAAGATGGTG	9	+	66319712-66319761	9qC	PREDICTED: Mus musculus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (Herc1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187491	ILMN_317572	HERC1	XM_001477062.1	XM_001477062.1		235439	149260053	XM_001477062.1	Herc1	XP_001477112.1	ILMN_2711506	000130133	S	3554	ACAATTGCTCTCCTCATTGGCCGATGTCTTGGTGGCATGCTTCAAGGCTC	9	+	66255874-66255923	9qC	PREDICTED: Mus musculus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (Herc1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187491	ILMN_317572	HERC1	XM_001477062.1	XM_001477062.1		235439	149260053	XM_001477062.1	Herc1	XP_001477112.1	ILMN_2637982	006040382	S	7070	AGAGTTGGAGGTCGGTGTGTTCACAAGCAAACTGGGCGCCATGCCACGCT	9	+	66296221-66296270	9qC	PREDICTED: Mus musculus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (Herc1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209161	ILMN_317572	HERC1	XM_001477062.1	XM_001477062.1		235439	149260053	XM_001477062.1	Herc1	XP_001477112.1	ILMN_2593116	005420138	S	15164	CGGCCCCACTCTGATTCCTGAATCTGCTTTATTTCTCTGCATAAGGAACC	9	+	66356591-66356640	9qC	PREDICTED: Mus musculus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (Herc1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187391	ILMN_187391	UBE2D3	NM_025356.2	NM_025356.2		66105	31541793	NM_025356.2	Ube2d3	NP_079632.1	ILMN_2486783	000770653	S	15	GTATTCTTAAGACACTGATCATGCTGTGTTCGTGATTTGGGGGGTGGGTA	3	+	135376160-135376209	3qG3	Mus musculus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (Ube2d3), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	AA414951; 9430029A22Rik; 1100001F19Rik	AA414951; 9430029A22Rik; 1100001F19Rik
Mus musculus	RefSeq	ILMN_200980	ILMN_200980	LOC384688	XM_357792.1	XM_357792.1			38087611	XM_357792.1	LOC384688		ILMN_2540684	004560112	S	1512	CCCTTCTCTGCTCCCAAACACAGCAGCAGAGGCTAAAGCTGAGCCAGAGA										
Mus musculus	RefSeq	ILMN_197690	ILMN_234484	LOC634649	XR_002805.1	XR_002805.1		634649	94370572	XR_002805.1	LOC634649		ILMN_1256390	006860091	S	829	CCTGTCAAGGACATCCTCCTGCTTCTTTTAGTGAAGGTGGCCAGGGTGGC					PREDICTED: Mus musculus similar to heterogeneous nuclear ribonucleoprotein K (LOC634649), mRNA.					
Mus musculus	RefSeq	ILMN_201075	ILMN_201075	LOC384751	XM_357842.1	XM_357842.1			38088684	XM_357842.1	LOC384751		ILMN_2540986	005490762	S	121	GGCATGTCCCTGTCTACTGAGTGTCCTGAGTCCTCAAGGTTCCAAGAGCC										
Mus musculus	RefSeq	ILMN_191233	ILMN_225546	DHRS4	NM_001037938.1	NM_001037938.1		28200	83816904	NM_001037938.1	Dhrs4	NP_001033027.1	ILMN_2477326	001010010	S	972	AGGTGTGTGGGGCGGGCTCAGTCCACCTTGCCTCTGTCGCCCTTCGTTGC	14	+	56108796-56108845	14qC3	Mus musculus dehydrogenase/reductase (SDR family) member 4 (Dhrs4), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A [goid 42574] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: R-CHOH-R' + NADP+ = R-CO-R' + NADPH + H+ [goid 4090] [evidence IEA]; Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal [goid 1758] [evidence IDA]	RRD; mouNRDR; AI043103; AI790593; D14Ucla2	RRD; mouNRDR; AI043103; AI790593; D14Ucla2
Mus musculus	RefSeq	ILMN_191233	ILMN_225546	DHRS4	NM_001037938.1	NM_001037938.1		28200	83816904	NM_001037938.1	Dhrs4	NP_001033027.1	ILMN_2658054	002510689	S	546	CCATGATGATTAAAGCGGTGGTGCCAGAGATGGAAAAGCGAGGAGGCGGC	14	+	56105958-56106000:56106097-56106103	14qC3	Mus musculus dehydrogenase/reductase (SDR family) member 4 (Dhrs4), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A [goid 42574] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: R-CHOH-R' + NADP+ = R-CO-R' + NADPH + H+ [goid 4090] [evidence IEA]; Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal [goid 1758] [evidence IDA]	RRD; mouNRDR; AI043103; AI790593; D14Ucla2	RRD; mouNRDR; AI043103; AI790593; D14Ucla2
Mus musculus	MEEBO	ILMN_187064	ILMN_187064	D530033B14RIK	scl9110.1.1_143						D530033B14Rik		ILMN_2440855	005290088	S	10	GAATAGAGACTAGGCTATAAGACATCCACACCGACGATGAATAAAGCCCT										
Mus musculus	RefSeq	ILMN_199526	ILMN_199526	LOC383611	XM_357152.1	XM_357152.1			38073986	XM_357152.1	LOC383611		ILMN_1259173	005670747	S	440	GCAGTGGTCACTACACTGAGAAGTATCTGCCCTTGCAGGATTTTGCAGGT										
Mus musculus	RefSeq	ILMN_238724	ILMN_238724	AA415398	NM_001004178.1	NM_001004178.1		433752	51921350	NM_001004178.1	AA415398	NP_001004178.1	ILMN_3160592	004050553	S	1772	CTCTGGGACCTAAGATTCAAGTGCTAAATGCACAGTCGATCCGTGCTTCC	4	-	119203000-119203049	4qD2.1	Mus musculus expressed sequence AA415398 (AA415398), mRNA.				MGC73851; MGC100084	MGC73851; MGC100084
Mus musculus	RefSeq	ILMN_194522	ILMN_242111	ATXN1L	NM_001080930.1	NM_001080930.1		52335	124286822	NM_001080930.1	Atxn1l	NP_001074399.1	ILMN_1259792	003140471	S	7047	GGCACTGGGGAGGTCTGGATGGATCTGGTTTGTGTAGGAGTTCCCTGTAG	8	-	112250780-112250829	8qD3	Mus musculus ataxin 1-like (Atxn1l), mRNA.				AW558552; D6Mgi37; C330011L24Rik; ENSMUSG00000069895	AW558552; D6Mgi37; C330011L24Rik; ENSMUSG00000069895
Mus musculus	RefSeq	ILMN_198890	ILMN_242111	ATXN1L	NM_001080930.1	NM_001080930.1		52335	124286822	NM_001080930.1	Atxn1l	NP_001074399.1	ILMN_2533287	007610064	S	2332	CGGGCTGCGATGCTCCGTCCCTCTTTCATTCCACAGGAGGTAAAGCTGTC	8	-	112255495-112255544	8qD3	Mus musculus ataxin 1-like (Atxn1l), mRNA.				AW558552; D6Mgi37; C330011L24Rik; ENSMUSG00000069895	AW558552; D6Mgi37; C330011L24Rik; ENSMUSG00000069895
Mus musculus	RefSeq	ILMN_212291	ILMN_317713	LOC100046035	XM_001475441.1	XM_001475441.1		100046035	149234022	XM_001475441.1	LOC100046035	XP_001475491.1	ILMN_1213123	002450010	S	2495	CCACCAATCTCATAATAGGCTCCATCGCTGGTGCCATCCTGGTAGCAGCT					PREDICTED: Mus musculus similar to ADAM23 (LOC100046035), mRNA.					
Mus musculus	RefSeq	ILMN_212291	ILMN_317713	LOC100046035	XM_001475441.1	XM_001475441.1		100046035	149234022	XM_001475441.1	LOC100046035	XP_001475491.1	ILMN_1242144	002350286	S	2747	GCCTCAGATCTGAGAATTGGGATGGGGTACAAGACAAAGGTCCCTTTTGG					PREDICTED: Mus musculus similar to ADAM23 (LOC100046035), mRNA.					
Mus musculus	RefSeq	ILMN_188607	ILMN_249882	AW146020	NM_177884.3	NM_177884.3		330361	70608162	NM_177884.3	AW146020	NP_808552.2	ILMN_1224611	006550528	S	2109	GCAGCATGTCTACCAGAAAGATGGTTTGAGAACTCTGCTATGAGGACATC	6	+	81906828-81906877	6qC3	Mus musculus expressed sequence AW146020 (AW146020), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	GCF2; A130099G21	GCF2; A130099G21
Mus musculus	RefSeq	ILMN_188607	ILMN_249882	AW146020	NM_177884.3	NM_177884.3		330361	70608162	NM_177884.3	AW146020	NP_808552.2	ILMN_2607657	001010367	S	1055	CATGTACACGTTGCTTTTAAAACGGTCAGAAGCACTTTTGAAACGCAGGC	6	+	81891341-81891390	6qC3	Mus musculus expressed sequence AW146020 (AW146020), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	GCF2; A130099G21	GCF2; A130099G21
Mus musculus	RefSeq	ILMN_220247	ILMN_220247	CYP4F16	NM_024442.1	NM_024442.1		70101	13277361	NM_024442.1	Cyp4f16	NP_077762.1	ILMN_2719687	004050678	S	215	CACTTGGGCATGATCCAGAGCAATGAGGAAGGCATGCAGCTGGTTACCGA	17	+	32674130-32674141:32677216-32677253	17qB1	Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 16 (Cyp4f16), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	2310021J05Rik; AI746515	2310021J05Rik; AI746515
Mus musculus	RefSeq	ILMN_220247	ILMN_220247	CYP4F16	NM_024442.1	NM_024442.1		70101	13277361	NM_024442.1	Cyp4f16	NP_077762.1	ILMN_2792351	002230376	S	1801	GCACCCCAGCTCAAGAACGGCCTTTATTCTTTTAGCGATAGGGAGGCACC	17	+	32688376-32688425	17qB1	Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 16 (Cyp4f16), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	2310021J05Rik; AI746515	2310021J05Rik; AI746515
Mus musculus	RefSeq	ILMN_220247	ILMN_220247	CYP4F16	NM_024442.1	NM_024442.1		70101	13277361	NM_024442.1	Cyp4f16	NP_077762.1	ILMN_2729452	000540075	S	1842	GGAGGCACCATAGATGTTTGAGCAGGAGAGTTACAAGGTTTACTGGCATG	17	+	32688417-32688466	17qB1	Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 16 (Cyp4f16), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	2310021J05Rik; AI746515	2310021J05Rik; AI746515
Mus musculus	RefSeq	ILMN_205361	ILMN_235517	SLC25A4	XM_991047.1	XM_991047.1		11739	94384944	XM_991047.1	Slc25a4	XP_996141.1	ILMN_1248759	002360730	S	1317	GAGTTGGCCCTAGGTATTTAGCATTAACAGCCTGGGTGCATAAGCAAGGG				8qB1.1	PREDICTED: Mus musculus solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4, transcript variant 1 (Slc25a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_238787	ILMN_238787	4932431H17RIK	NM_001081262.1	NM_001081262.1		545527	124486918	NM_001081262.1	4932431H17Rik	NP_001074731.1	ILMN_3098994	003190717	A	1179	CGTATGGCAGTGACATTGACAGGCTCAAGGCAAAGGAGAAGGCTCTGCAG	3	-	58428921-58428970	3qD	Mus musculus RIKEN cDNA 4932431H17 gene (4932431H17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_238787	ILMN_238787	4932431H17RIK	NM_001081262.1	NM_001081262.1		545527	124486918	NM_001081262.1	4932431H17Rik	NP_001074731.1	ILMN_3026210	000050187	I	1939	GGTTCCAGCCCTGTGGTTCCTGAGTGGAGACGACCTTCTGCTGTTGGCCA	3	-	58420428-58420477	3qD	Mus musculus RIKEN cDNA 4932431H17 gene (4932431H17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212133	ILMN_212133	FAM168A	NM_178764.3	NM_178764.3		319604	51592074	NM_178764.3	Fam168a	NP_848879.1	ILMN_2623112	003460368	S	3757	GGGGTTATGTGACCACAGCTGGCAAGGTGACACGTAGCTGGCAGGAATAC	7	+	107987318-107987367	7qE3	Mus musculus family with sequence similarity 168, member A (Fam168a), mRNA.				mKIAA0280; 2610030B18Rik	mKIAA0280; 2610030B18Rik
Mus musculus	RefSeq	ILMN_212133	ILMN_212133	FAM168A	NM_178764.3	NM_178764.3		319604	51592074	NM_178764.3	Fam168a	NP_848879.1	ILMN_2895339	007100343	S	6358	GATGTTTTCAAAATACAGCCTGGAGTGTAAAGATTGGAAAGCCCTGTGGC	7	+	107989919-107989968	7qE3	Mus musculus family with sequence similarity 168, member A (Fam168a), mRNA.				mKIAA0280; 2610030B18Rik	mKIAA0280; 2610030B18Rik
Mus musculus	Riken	ILMN_202020	ILMN_202020	1700014B12RIK	ri|1700014B12|ZX00050B05|AK005973|716					AK005973	1700014B12Rik		ILMN_1253266	003990274	S	645	CCCACACGTCAGGGCTTTCCTGTACACTTGTAACCCTCCTACTTTAGAGC										
Mus musculus	RefSeq	ILMN_192072	ILMN_224884	USP2	NM_198092.2	NM_198092.2		53376	114052497	NM_198092.2	Usp2	NP_932760.2	ILMN_1223302	002600246	S	127	AGTACCAGCCAGGACTCATCCGCAGCTCCATGCTTGTGCCCGGTTCGACT	9	+	43875230-43875279	9qA5.1	Mus musculus ubiquitin specific peptidase 2 (Usp2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	B930035K21Rik; Ubp41	B930035K21Rik; Ubp41
Mus musculus	RefSeq	ILMN_219042	ILMN_261124	4932417I16RIK	NM_001033321.1	NM_001033321.1		234740	75677479	NM_001033321.1	4932417I16Rik	NP_001028493.1	ILMN_2705176	004590201	S	2302	TCCTCACCACGTGCCTCAGTTTACCTTGGAGACATCCTTCTGTCAGGCTG	8	-	114436453-114436502	8qE1	Mus musculus RIKEN cDNA 4932417I16 gene (4932417I16Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm178	Gm178
Mus musculus	RefSeq	ILMN_219042	ILMN_261124	4932417I16RIK	NM_001033321.1	NM_001033321.1		234740	75677479	NM_001033321.1	4932417I16Rik	NP_001028493.1	ILMN_2703464	005570500	S	632	CCTTTTGCCCAGGACTACGACCTCACCCACATTGTTGCCGCCTATCAGGA	8	-	114439164-114439213	8qE1	Mus musculus RIKEN cDNA 4932417I16 gene (4932417I16Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm178	Gm178
Mus musculus	RefSeq	ILMN_215827	ILMN_215827	ALAS1	NM_020559.1	NM_020559.1		11655	23956101	NM_020559.1	Alas1	NP_065584.1	ILMN_2664040	005720180	S	2026	CTCAGTTATTCACAAACCCCAGGCCATTACCATACCCACATAGTAGCCAG	9	-	106136311-106136360	9qF1	Mus musculus aminolevulinic acid synthase 1 (Alas1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next [goid 33014] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2 [goid 3870] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]	Alas-h; Alas-1; ALAS	Alas-h; Alas-1; ALAS
Mus musculus	RefSeq	ILMN_187229	ILMN_231090	SLC25A30	NM_026232.3	NM_026232.3		67554	146135046	NM_026232.3	Slc25a30	NP_080508.1	ILMN_2675523	007550463	S	1534	ACTGCACGGCTTCATGGTTCCTGCTTGGGCAGAATCTTTCACTTACAGTA				14qD3	Mus musculus solute carrier family 25, member 30 (Slc25a30), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW319655; 4933433D23Rik; KMCP1	AW319655; 4933433D23Rik; KMCP1
Mus musculus	RefSeq	ILMN_212526	ILMN_212526	IL13RA2	NM_008356.2	NM_008356.2		16165	142345552	NM_008356.2	Il13ra2	NP_032382.1	ILMN_1246284	005820446	S	1366	GAAGTGTGTGCTTATGAAGATACCCTCTGTTAAACCACCAATTTCTTGAC	X	-	143818145-143818163:143818164-143818194	XqF2	Mus musculus interleukin 13 receptor, alpha 2 (Il13ra2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD213a2	CD213a2
Mus musculus	RefSeq	ILMN_194937	ILMN_245642	HNRNPC	NM_016884.2	NM_016884.2		15381	142354302	NM_016884.2	Hnrnpc	NP_058580.1	ILMN_1235470	000830204	S	1245	CATGATTGCCCTGCGCCTAGTTACAGTTCCACTTCCTTTGATGCTCCGTA	14	-	52694558-52694607	14qC2	Mus musculus heterogeneous nuclear ribonucleoprotein C (Hnrnpc), mRNA.	The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]	hnrnp-C; Hnrpc1; hnRNPC2; Hnrpc2; AL022939; hnRNPC1; D14Wsu171e; Hnrnpc	hnrnp-C; Hnrpc1; hnRNPC2; Hnrpc2; AL022939; hnRNPC1; D14Wsu171e; Hnrnpc
Mus musculus	RefSeq	ILMN_210776	ILMN_210776	MGAT4B	NM_145926.2	NM_145926.2		103534	33239191	NM_145926.2	Mgat4b	NP_666038.2	ILMN_2684268	004560678	S	57	TGTGCGCCTTCCTCTCGCTCTCCTGGTACGCAGCGCTCAGCGGCCAGAAA	11	+	50039191-50039240	11qB1.3	Mus musculus mannoside acetylglucosaminyltransferase 4, isoenzyme B (Mgat4b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + (N-acetyl-beta-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R [goid 8454] [evidence IEA]	AA407995	AA407995
Mus musculus	RefSeq	ILMN_210776	ILMN_210776	MGAT4B	NM_145926.2	NM_145926.2		103534	33239191	NM_145926.2	Mgat4b	NP_666038.2	ILMN_2609073	007150348	S	1574	CTGGAAGCACTACGTCTCTCCATTCAGACTGACTCCCCGGTGTGGGTCAT	11	+	50047965-50048014	11qB1.3	Mus musculus mannoside acetylglucosaminyltransferase 4, isoenzyme B (Mgat4b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + (N-acetyl-beta-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R [goid 8454] [evidence IEA]	AA407995	AA407995
Mus musculus	Riken	ILMN_204796	ILMN_204796	5530400C07RIK	ri|5530400C07|PX00022P20|AK030693|2740					AK030693	5530400C07Rik		ILMN_1214355	002260386	S	2533	GGCTCTGACACTAGGCAGTAGCTGTGTGTCCTTGGCCAGATCACTTAACC										
Mus musculus	RefSeq	ILMN_257716	ILMN_257716	GCAT	NM_013847.2	NM_013847.2		26912	31560487	NM_013847.2	Gcat	NP_038875.2	ILMN_2875336	005820743	S	2192	AGGCTTATGACTGCTGCTGTAGGCTCAGTGTGGGGGTGTGGCCTTGGGTA	15	+	78865476-78865525	15qE1	Mus musculus glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase) (Gcat), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + glycine = CoA + 2-amino-3-oxobutanoate [goid 8890] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]	Kbl; AI526977	Kbl; AI526977
Mus musculus	Riken	ILMN_203115	ILMN_203115	3830432E14RIK	ri|3830432E14|PX00007H02|AK028396|2114					AK028396	3830432E14Rik		ILMN_1254564	001090600	S	977	GCAGAGAACTGTGTGCGGCTGCTGAGTTTTGCTGACCTCTTCAGTTGTGA										
Mus musculus	Riken	ILMN_204530	ILMN_204530	NEURL	ri|B230378F24|PX00161F18|AK046382|4034					AK046382	Neurl		ILMN_2565686	001990446	S	3936	CCATGTAGGGATGTGGCCGGGCTGGGTCTGCACAAGGAGTTCCACGATAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus [goid 9605] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The assembly and organization of the sperm flagellar axoneme, the bundle of microtubules and associated proteins that forms the core of the eukaryotic sperm flagellum, and is responsible for movement [goid 7288] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219591	ILMN_219591	S100A8	NM_013650.2	NM_013650.2		20201	113930764	NM_013650.2	S100a8	NP_038678.1	ILMN_2710905	001190546	S	59	CCGTCTGAACTGGAGAAGGCCTTGAGCAACCTCATTGATGTCTACCACAA	3	+	90473467-90473516	3qF1	Mus musculus S100 calcium binding protein A8 (calgranulin A) (S100a8), mRNA.		The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Caga; MRP8; CP-10; CFAg; B8Ag; p8; AI323541; 60B8Ag	Caga; MRP8; CP-10; CFAg; B8Ag; p8; AI323541; 60B8Ag
Mus musculus	MEEBO	ILMN_218999	ILMN_218999	D630029K19RIK	scl00229225.2_168	NM_172679.1			27369989	NM_172679.1	D630029K19Rik		ILMN_2702922	001990687	S	2820	GTAGAGTTCATCATTTTGTTGTTAGCGCTAGTCCTTATTTATGTGATCCT										
Mus musculus	RefSeq	ILMN_214717	ILMN_214717	KNG1	NM_023125.2	NM_023125.2		16644	31981262	NM_023125.2	Kng1	NP_075614.1	ILMN_1225218	004220301	S	792	CTTCATGGATATTAATAACAAAATTGCCAACTTCTCACAGAGCTGTACCC	16	+	23073457-23073506	16qB1	Mus musculus kininogen 1 (Kng1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA];  [goid 4869] [evidence IEA]	MGC123437; Kng	MGC123437; Kng
Mus musculus	RefSeq	ILMN_214717	ILMN_214717	KNG1	NM_023125.2	NM_023125.2		16644	31981262	NM_023125.2	Kng1	NP_075614.1	ILMN_2788221	001340626	S	1388	AGCAGTAGTCCCAGCAATGACCCAGAGGGAAGGACCAGAAGAATCCTGGG	16	+	23081642-23081649:23081650-23081691	16qB1	Mus musculus kininogen 1 (Kng1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA];  [goid 4869] [evidence IEA]	MGC123437; Kng	MGC123437; Kng
Mus musculus	RefSeq	ILMN_214717	ILMN_214717	KNG1	NM_023125.2	NM_023125.2		16644	31981262	NM_023125.2	Kng1	NP_075614.1	ILMN_2788223	004290521	S	1448	CGCGGGACCATCGTCTTCATCACCCTGATCCTAGTGGAAATAAAATTCAG	16	+	23081702-23081751	16qB1	Mus musculus kininogen 1 (Kng1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA];  [goid 4869] [evidence IEA]	MGC123437; Kng	MGC123437; Kng
Mus musculus	RefSeq	ILMN_220813	ILMN_252724	NTRK1	XM_908571.2	XM_908571.2		18211	94370037	XM_908571.2	Ntrk1	XP_913664.1	ILMN_2727220	006980224	S	2289	TGATGTCTACGCCATCATGCGAGGCTGCTGGCAGCGAGAACCGCAGCAAC				3qF1	PREDICTED: Mus musculus neurotrophic tyrosine kinase, receptor, type 1, transcript variant 5 (Ntrk1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_253687	ILMN_253687	MREG	NM_001005423.1	NM_001005423.1		381269	53749211	NM_001005423.1	Mreg	NP_001005423.1	ILMN_2976159	002760750	S	1681	ATGCAGGCAGTGGTGTATGCTGACAGAGGTCGCTGCTGGGTCTTCACGCT	1	-	72206569-72206618	1qC3	Mus musculus melanoregulin (Mreg), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]		dsu; Wdt2; Gm974; MGC92980	dsu; Wdt2; Gm974; MGC92980
Mus musculus	Riken	ILMN_201844	ILMN_201844	MRPL15	ri|5730533N12|PX00006G15|AK017804|1002					AK017804	Mrpl15		ILMN_1231294	000070139	S	653	GGTGCCCTATTACACCGATGCAAAAAACCGGGGCTACCTGGCTGACCCTG						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]; The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome [goid 2] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]		
Mus musculus	RefSeq	ILMN_214200	ILMN_214200	2410146L05RIK	NM_026480.2	NM_026480.2		67968	142364511	NM_026480.2	2410146L05Rik	NP_080756.1	ILMN_2645460	002370053	S	551	CTTAAATCACTACACGTATTTTCTTACCCGCCTTCACGAGCACCTCCTGT	9	-	78225316-78225361:78225362-78225365	9qE1	Mus musculus RIKEN cDNA 2410146L05 gene (2410146L05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223513	ILMN_223513	IPO5	NM_023579.4	NM_023579.4		70572	146149266	NM_023579.4	Ipo5	NP_076068.1	ILMN_2764995	000870121	S	4080	GCTCTGCAGTGCAGCCTTGGAAGTGTGTCTCCTGTCTTGGAAAGCGCAGT				14qE5	Mus musculus importin 5 (Ipo5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Kpnb3; IMB3; C76941; 5730478E03Rik; 1110011C18Rik; IPO5; AA409333	Kpnb3; IMB3; C76941; 5730478E03Rik; 1110011C18Rik; IPO5; AA409333
Mus musculus	RefSeq	ILMN_210740	ILMN_235586	NPAL2	NM_145469.4	NM_145469.4		223473	146149142	NM_145469.4	Npal2	NP_663444.2	ILMN_2723369	007570324	S	1547	CCTTAGTCTTTAAAGGAAGATTCGATGTGCTTGTCCTTGGGCGCCTTCTA				15qB3.1	Mus musculus NIPA-like domain containing 2 (Npal2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9330161F08Rik; Nipal2	9330161F08Rik; Nipal2
Mus musculus	RefSeq	ILMN_210740	ILMN_235586	NPAL2	NM_145469.4	NM_145469.4		223473	146149142	NM_145469.4	Npal2	NP_663444.2	ILMN_1223548	006420086	S	3654	CCAGTCTCATGCACCACGTTGATAATAATTTTGGGAGCTATCTCTCATGC				15qB3.1	Mus musculus NIPA-like domain containing 2 (Npal2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9330161F08Rik; Nipal2	9330161F08Rik; Nipal2
Mus musculus	RefSeq	ILMN_191378	ILMN_248582	B230218P12RIK	XM_896593.2	XM_896593.2		78880	94380804	XM_896593.2	B230218P12Rik	XP_901686.1	ILMN_1220716	006980592	S	567	CAAGGCTGAACGGTGAAGAGATTTGCAACAGTTAACCTGGTTCCATCTCC	7	+	97626248-97626297	7qE1	PREDICTED: Mus musculus RIKEN cDNA B230218P12 gene, transcript variant 2 (B230218P12Rik), mRNA.					
Mus musculus	MEEBO	ILMN_191393	ILMN_191393	C430014K11RIK	scl46752.1.555_0						C430014K11Rik		ILMN_1216617	002100131	S	12	TTTCAGTTTCTCCCTTTTTACCTTCTACCTTCACCTCCAGGACCCTCCCC										
Mus musculus	MEEBO	ILMN_216769	ILMN_216769	SNRPB	scl020638.2_15	NM_009225.1			6678052	NM_009225.1	Snrpb		ILMN_1239795	001510324	S	452	AAATTCCTGCGGCATTTTGCAGGCAGCATTTCCGTTAGCGGCGGCGGCGG						A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_195399	ILMN_244025	TYSND1	XM_905996.2	XM_905996.2		71767	94388298	XM_905996.2	Tysnd1	XP_911089.3	ILMN_1237212	000770176	S	1555	GCCAGCAACACTCGAGACAACAACACGGGAGCCACCTACCCACACCTGAA				10qB4	PREDICTED: Mus musculus trypsin domain containing 1, transcript variant 3 (Tysnd1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]		
Mus musculus	Riken	ILMN_205625	ILMN_205625	D230017C05RIK	ri|D230017C05|PX00188N16|AK051902|1673					AK051902	D230017C05Rik		ILMN_2574005	006560176	S	1377	GCAAGGCAACGACCATTATCTTTATCAGATTTGCAGGCTCAGTGCCAGTC										
Mus musculus	RefSeq	ILMN_250589	ILMN_250589	CLTA	NM_001080385.1	NM_001080385.1		12757	122939193	NM_001080385.1	Clta	NP_001073854.1	ILMN_3106203	003440544	A	879	GCCCCCCTGGTGCACTGAAGAGCCACCCTGTGGAAACACTACGTCTACAA	4	+	44045427-44045444:44045445-44045476	4qB1	Mus musculus clathrin, light polypeptide (Lca) (Clta), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex [goid 30132] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AV026556	AV026556
Mus musculus	RefSeq	ILMN_212529	ILMN_212529	PASK	NM_080850.1	NM_080850.1		269224	18497291	NM_080850.1	Pask	NP_543126.1	ILMN_1250738	002140554	S	4318	GAGCCTGCGATGCTAGTTTTCTTAGGTTTATGATATAGACTTGTAATTCA	1	-	95217036-95217085	1qD	Mus musculus PAS domain containing serine/threonine kinase (Pask), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA0135	mKIAA0135
Mus musculus	RefSeq	ILMN_212529	ILMN_212529	PASK	NM_080850.1	NM_080850.1		269224	18497291	NM_080850.1	Pask	NP_543126.1	ILMN_2933138	002690152	S	4683	GGTACATGTGACATGTGACAGATGTATGGAGTCTATAGAAGTGGCCAGAC	1	-	95215831-95215880	1qD	Mus musculus PAS domain containing serine/threonine kinase (Pask), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA0135	mKIAA0135
Mus musculus	RefSeq	ILMN_186837	ILMN_253780	V1RD9	NM_030735.1	NM_030735.1		81010	13507693	NM_030735.1	V1rd9	NP_109660.1	ILMN_2499177	005310717	S	68	GTCATAGCTGTTTTTCTTCAGTAAATGCTAAGAAGAAGGCTTTCATCCCT	7	+	24443402-24443451	7qA3	Mus musculus vomeronasal 1 receptor, D9 (V1rd9), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	V3R9	V3R9
Mus musculus	RefSeq	ILMN_253780	ILMN_253780	V1RD9	NM_030735.1	NM_030735.1		81010	13507693	NM_030735.1	V1rd9	NP_109660.1	ILMN_2959825	004560367	S	1055	CGTGTATGGTTGAGGCATGTCAGTGGAATTTGGGCTGCAAGTTTCCCCAC	7	+	24445512-24445561	7qA3	Mus musculus vomeronasal 1 receptor, D9 (V1rd9), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	V3R9	V3R9
Mus musculus	RefSeq	ILMN_200808	ILMN_200808	LOC384593	XM_357733.1	XM_357733.1		384593	38086276	XM_357733.1	LOC384593	XP_357733.1	ILMN_1217709	007040438	S	386	GCTTGGCTCCTAATTATGATGTTCTAGATGTTGCCAACAAGACTAGGGTC				7qB1	PREDICTED: Mus musculus similar to 60S ribosomal protein L23a (LOC384593), mRNA.					
Mus musculus	RefSeq	ILMN_217717	ILMN_257414	B3GALNT2	NM_178640.2	NM_178640.2		97884	118130611	NM_178640.2	B3galnt2	NP_848755.1	ILMN_1238533	001940278	S	3455	GCGCTGGTCCGTCAAGAACACACTAGGAATTTCTTTCCAAAGACAGGTTG	13	+	14091109-14091158	13qA1	Mus musculus UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 (B3galnt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways involving UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 19276] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an oligosaccharide [goid 8376] [evidence ISA]	D230016N13Rik; MGC103263; A930105D20Rik; C80633	D230016N13Rik; MGC103263; A930105D20Rik; C80633
Mus musculus	RefSeq	ILMN_257414	ILMN_257414	B3GALNT2	NM_178640.2	NM_178640.2		97884	118130611	NM_178640.2	B3galnt2	NP_848755.1	ILMN_2943762	000290278	S	3320	ATAACTTCCTAAGGGGTTGCTGAAGTTCCCTGGAGTGGGGGCCTTGCGGG	13	+	14090974-14091023	13qA1	Mus musculus UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 (B3galnt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways involving UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 19276] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an oligosaccharide [goid 8376] [evidence ISA]	D230016N13Rik; MGC103263; A930105D20Rik; C80633	D230016N13Rik; MGC103263; A930105D20Rik; C80633
Mus musculus	RefSeq	ILMN_205826	ILMN_257414	B3GALNT2	NM_178640.2	NM_178640.2		97884	118130611	NM_178640.2	B3galnt2	NP_848755.1	ILMN_1220974	004050292	S	2301	GGAGGTGGTGAGACGTGCGAGACAGGCTCAGTGTACGCATAGCATAGAGA	13	+	14089955-14090004	13qA1	Mus musculus UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 (B3galnt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways involving UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 19276] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an oligosaccharide [goid 8376] [evidence ISA]	D230016N13Rik; MGC103263; A930105D20Rik; C80633	D230016N13Rik; MGC103263; A930105D20Rik; C80633
Mus musculus	RefSeq	ILMN_196629	ILMN_257414	B3GALNT2	NM_178640.2	NM_178640.2		97884	118130611	NM_178640.2	B3galnt2	NP_848755.1	ILMN_1231605	005340743	S	1301	TTGGGCAGTGGACAGAACCGGAAAATGGCAGGAGCTGGAATACCCGAGCC	13	+	14087395-14087444	13qA1	Mus musculus UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 (B3galnt2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways involving UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 19276] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of an N-acetylgalactosaminyl residue from UDP-N-acetyl-galactosamine to an oligosaccharide [goid 8376] [evidence ISA]	D230016N13Rik; MGC103263; A930105D20Rik; C80633	D230016N13Rik; MGC103263; A930105D20Rik; C80633
Mus musculus	MEEBO	ILMN_189782	ILMN_189782	B930019K04RIK	scl45767.1.23_188						B930019K04Rik		ILMN_2464305	004250647	S	20	GATCCAAGAGAAATGGCACCAAGTGCCAGGCGTTCACTGTGTGTGGCTTC										
Mus musculus	RefSeq	ILMN_216771	ILMN_216771	4921507P07RIK	NM_027564.3	NM_027564.3		70821	146141212	NM_027564.3	4921507P07Rik	NP_081840.1	ILMN_1253347	001940653	S	1908	GGCTACAATGGCCATCATTTCTATAATTGAGATTCCCTTGAGACCCAGTC				6qB2.3	Mus musculus RIKEN cDNA 4921507P07 gene (4921507P07Rik), mRNA.				TISP74	TISP74
Mus musculus	Riken	ILMN_205772	ILMN_205772	D030073G13RIK	ri|D030073G13|PX00182I22|AK051109|2574					AK051109	D030073G13Rik		ILMN_1220667	006040048	S	2274	CCTGACAGGGTGACTCTTATCACTGGTCCCTACTCAATAACAGTCACTGC										
Mus musculus	RefSeq	ILMN_222686	ILMN_222686	C8B	NM_133882.2	NM_133882.2		110382	142381481	NM_133882.2	C8b	NP_598643.1	ILMN_1227404	004880736	S	1860	ACACACAGATGATCCCGAGTGAACTCCAACCCTCACACACTTAGCCAGGC	4	+	104476774-104476823	4qC6	Mus musculus complement component 8, beta polypeptide (C8b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow [goid 5579] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]		4930439B20Rik; AI595927	4930439B20Rik; AI595927
Mus musculus	RefSeq	ILMN_198856	ILMN_198856	LOC234024	XM_146226.2	XM_146226.2			38089110	XM_146226.2	LOC234024		ILMN_1221858	007050088	S	926	ATCCGTTTGACATTGCAGCTGTTCCCAGCCCTTCCGAGGCAGCCAGTGAG										
Mus musculus	RefSeq	ILMN_199462	ILMN_199462	LOC382590	XM_356583.1	XM_356583.1			38049471	XM_356583.1	LOC382590		ILMN_2535294	002470278	S	1091	GAGCTCCACCTCAGACACGCCCAGAAAAGAGAAAGCCACATAATTACCCC										
Mus musculus	RefSeq	ILMN_217166	ILMN_217166	PYY	NM_145435.1	NM_145435.1		217212	21703867	NM_145435.1	Pyy	NP_663410.1	ILMN_1259546	000270747	S	385	GCATGTTTGGTTTAAGAAGAGGGCACTTCATATCTCGGTGTCTCGGACAC	11	-	101968054-101968103	11qD	Mus musculus peptide YY (Pyy), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IDA]	MGC19143	MGC19143
Mus musculus	RefSeq	ILMN_216161	ILMN_216161	CUGBP1	NM_198683.1	NM_198683.1		13046	38570083	NM_198683.1	Cugbp1	NP_941955.1	ILMN_2667972	005080132	S	2042	GCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACACAC	2	+	90857072-90857121	2qE1	Mus musculus CUG triplet repeat, RNA binding protein 1 (Cugbp1), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	CUGBP; NAB50; HNAB50; D2Wsu101e; Brunol2; CUG-BP; 1600010O03Rik; AA407467; CUG-BP1	CUGBP; NAB50; HNAB50; D2Wsu101e; Brunol2; CUG-BP; 1600010O03Rik; AA407467; CUG-BP1
Mus musculus	RefSeq	ILMN_216161	ILMN_216161	CUGBP1	NM_198683.1	NM_198683.1		13046	38570083	NM_198683.1	Cugbp1	NP_941955.1	ILMN_1221266	003190041	S	1457	ATGCCCTTTGGGAATGTCGTGTCGGCCAAGGTTTTCATAGACAAGCAGAC	2	+	90852929-90852978	2qE1	Mus musculus CUG triplet repeat, RNA binding protein 1 (Cugbp1), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	CUGBP; NAB50; HNAB50; D2Wsu101e; Brunol2; CUG-BP; 1600010O03Rik; AA407467; CUG-BP1	CUGBP; NAB50; HNAB50; D2Wsu101e; Brunol2; CUG-BP; 1600010O03Rik; AA407467; CUG-BP1
Mus musculus	RefSeq	ILMN_216161	ILMN_216161	CUGBP1	NM_198683.1	NM_198683.1		13046	38570083	NM_198683.1	Cugbp1	NP_941955.1	ILMN_2667971	005090400	S	2040	GAGCAGCCCTACTAGCACATGCCGTGTGGTGTTTGTATCCTTGTGAACAC	2	+	90857070-90857119	2qE1	Mus musculus CUG triplet repeat, RNA binding protein 1 (Cugbp1), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	CUGBP; NAB50; HNAB50; D2Wsu101e; Brunol2; CUG-BP; 1600010O03Rik; AA407467; CUG-BP1	CUGBP; NAB50; HNAB50; D2Wsu101e; Brunol2; CUG-BP; 1600010O03Rik; AA407467; CUG-BP1
Mus musculus	RefSeq	ILMN_208735	ILMN_208735	PACSIN3	NM_028733.1	NM_028733.1		80708	28077026	NM_028733.1	Pacsin3	NP_083009.1	ILMN_2639744	003130561	S	126	AGGTGGTTTGTCGGGTGGCGCTGTCTATAAGGGTGGAGGCCAAAGACCGG	2	+	91058293-91058342	2qE1	Mus musculus protein kinase C and casein kinase substrate in neurons 3 (Pacsin3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AW413130; 6330413E15Rik; 4921507A02Rik	AW413130; 6330413E15Rik; 4921507A02Rik
Mus musculus	RefSeq	ILMN_213303	ILMN_255894	9230105E10RIK	NM_175677.3	NM_175677.3		319236	31982206	NM_175677.3	9230105E10Rik	NP_783608.2	ILMN_2661982	005900053	S	2005	CTGCATATCAATGAAAGAAGATTAAAGAAAGTTCAACAACTTGTCCATTC	7	-	111488818-111488867	7qE3	Mus musculus RIKEN cDNA 9230105E10 gene (9230105E10Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	TRIM5	TRIM5
Mus musculus	RefSeq	ILMN_192900	ILMN_192900	UBE2V1	NM_023230.2	NM_023230.2		66589	114326404	NM_023230.2	Ube2v1	NP_075719.1	ILMN_2492377	000730224	S	719	GGATCAAGAAGGTGTTGAAATCGGTTTCCTGTGGGAGCGGTGGGCACAGC	2	-	167434320-167434369	2qH3	Mus musculus ubiquitin-conjugating enzyme E2 variant 1 (Ube2v1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D7Bwg1382e; AI256840; CROC1; 0610011J09Rik	D7Bwg1382e; AI256840; CROC1; 0610011J09Rik
Mus musculus	RefSeq	ILMN_203456	ILMN_324393	LOC100041576	XM_001477438.1	XM_001477438.1		100041576	149253902	XM_001477438.1	LOC100041576	XP_001477488.1	ILMN_1235589	000160243	S	2597	CTCTGGTGAAAGTCTGAGTGCTGGCTCAAGATTGACAACTCAAAGTGGGG	5	-	46116171-46116220	5qB3	PREDICTED: Mus musculus hypothetical protein LOC100041576 (LOC100041576), mRNA.					
Mus musculus	RefSeq	ILMN_210876	ILMN_254834	FGD4	NM_139232.2	NM_139232.2		224014	142367762	NM_139232.2	Fgd4	NP_631978.1	ILMN_1252036	004220463	S	2393	CCCCTCCTGGGCTACGTTGTGGATGATATGCCTAAGAGTGCAGATCTGCC	16	-	16422839-16422888	16qA3	Mus musculus FYVE, RhoGEF and PH domain containing 4 (Fgd4), transcript variant alpha, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; Formation of a microspike, a thin, stiff projection extended from the surface of a migrating cell [goid 30035] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence ISO]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]	Frabp; 9330209B17Rik; 9030023J02Rik; ZFYVE6	Frabp; 9330209B17Rik; 9030023J02Rik; ZFYVE6
Mus musculus	RefSeq	ILMN_210876	ILMN_254834	FGD4	NM_139232.2	NM_139232.2		224014	142367762	NM_139232.2	Fgd4	NP_631978.1	ILMN_2680011	006020575	S	1596	TAAAAGAAGGACAAATCCTCAAACTAGCAGCTCGGAACACATCAGCACAA	16	-	16461704-16461753	16qA3	Mus musculus FYVE, RhoGEF and PH domain containing 4 (Fgd4), transcript variant alpha, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]; Formation of a microspike, a thin, stiff projection extended from the surface of a migrating cell [goid 30035] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence ISO]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]	Frabp; 9330209B17Rik; 9030023J02Rik; ZFYVE6	Frabp; 9330209B17Rik; 9030023J02Rik; ZFYVE6
Mus musculus	MEEBO	ILMN_193192	ILMN_193192	4930433M22RIK	scl074650.1_112						4930433M22Rik		ILMN_1253290	003890324	S	20	TTCAATGACCAGCCATGATATAACGTCAAATAGGCATTAGCAGGACATCC										
Mus musculus	RefSeq	ILMN_235860	ILMN_235860	ZFP277	NM_178845.1	NM_178845.1		246196	41281920	NM_178845.1	Zfp277	NP_849173.1	ILMN_3123889	002750037	A	1397	GAGAAGCTGCTGCAGGCACAGTGTCACCTGGTTTTCTCCTGTGAGACACA	12	-	40826088-40826137	12qB1	Mus musculus zinc finger protein 277 (Zfp277), transcript variant 2, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2410017E24Rik; NIRF4	2410017E24Rik; NIRF4
Mus musculus	RefSeq	ILMN_191716	ILMN_250534	POU1F1	NM_008849.3	NM_008849.3		18736	115270979	NM_008849.3	Pou1f1	NP_032875.1	ILMN_1240464	006350280	S	1643	GCGTTCACTTTCATCCAAAACACTACCAGGAAAGTCCCTCACAACACCCC	16	+	65534968-65535017	16qC1.3	Mus musculus POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1) (Pou1f1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; Any process that modulates the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43567] [evidence IMP]; The process whose specific outcome is the progression of a somatotropin secreting cell over time, from its formation to the mature structure. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin [goid 60133] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of inositol trisphosphate [goid 32962] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whereby a relatively unspecialized cell, acquires specialized structural and/or functional features of a somatotropin secreting cell. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin [goid 60126] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The process whereby a relatively unspecialized cell, acquires specialized structural and/or functional features of a somatotropin secreting cell. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin [goid 60126] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Pit1; GHF-1; dw; Hmp1; Pit-1; dwarf	Pit1; GHF-1; dw; Hmp1; Pit-1; dwarf
Mus musculus	MEEBO	ILMN_192809	ILMN_192809	SCL0001951.1_12	scl0001951.1_12						scl0001951.1_12		ILMN_2491533	005570463	S	10	CCTGGCTGAGGATATGTCCTTGCAAAACACGAGCCCTCCTAGTGAAGAGG										
Mus musculus	RefSeq	ILMN_216232	ILMN_216232	OLFR73	NM_054090.1	NM_054090.1		117004	16905122	NM_054090.1	Olfr73	NP_473431.1	ILMN_2668756	006380364	S	760	GGAACAATCCTATTCCTATACTGTGTACCTAACTCCAAGAACTCCAGGCA	2	-	87874485-87874534	2qD	Mus musculus olfactory receptor 73 (Olfr73), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IDA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with an odorant, any substance capable of stimulating the sense of smell [goid 5549] [evidence IDA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IDA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR174-9; fascin-1; mOR-EG	MOR174-9; fascin-1; mOR-EG
Mus musculus	MEEBO	ILMN_184846	ILMN_184846	CLCNKB	scl056365.1_94				9789908	NM_019701	Clcnkb		ILMN_2422067	005550041	S	18	GAAGGAGCTGAGAGTAAATGAAGACATTGTGACCCTTGTGACTTCTGGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_247295	ILMN_247295	GTPBP6	NM_145147.2	NM_145147.2		107999	31981749	NM_145147.2	Gtpbp6	NP_660129.1	ILMN_2901056	003870438	S	1178	GTGTCTGCAATCTCAGGGCGTGGGCTAGACGAGCTGAAGGCCGCACTGGA	5	-	110344640-110344689	5qF	Mus musculus GTP binding protein 6 (putative) (Gtpbp6), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AV119224; pgpl; Pgbpll	AV119224; pgpl; Pgbpll
Mus musculus	RefSeq	ILMN_196509	ILMN_258853	4930480E11RIK	XM_910988.2	XM_910988.2		74910	94407863	XM_910988.2	4930480E11Rik	XP_916081.1	ILMN_1258502	006330563	S	916	GAAAACACAGGCTGTAAAAGAGCCTTTAAATGACCCCAAGAGCTTGCCTG				XqB	PREDICTED: Mus musculus RIKEN cDNA 4930480E11 gene (4930480E11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196509	ILMN_258853	4930480E11RIK	XM_910988.2	XM_910988.2		74910	94407863	XM_910988.2	4930480E11Rik	XP_916081.1	ILMN_2721584	006770440	S	1414	ATAGTCTTTCATTGACACTGCTACAAAAATCATTTGTAAAACTACATAAA				XqB	PREDICTED: Mus musculus RIKEN cDNA 4930480E11 gene (4930480E11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_227015	ILMN_227015	AOF1	NM_172262.1	NM_172262.1		218214	26986558	NM_172262.1	Aof1	NP_758466.1	ILMN_3007898	006480377	S	3968	AAATGGCCCTTCTAAGTCAGTTAGTTTCTAGGCACTTGAGCTTTGTGTGC	13	+	47179700-47179749	13qA5	Mus musculus amine oxidase, flavin containing 1 (Aof1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	4632428N09Rik; AI482520; MGC38211	4632428N09Rik; AI482520; MGC38211
Mus musculus	RefSeq	ILMN_189760	ILMN_227015	AOF1	NM_172262.1	NM_172262.1		218214	26986558	NM_172262.1	Aof1	NP_758466.1	ILMN_1217184	005870192	S	1723	CAGTTCAGCGAGCTGGAGGGACAGGTGCTGCAGTTCCACCTGAGTAACCT	13	+	47167320-47167369	13qA5	Mus musculus amine oxidase, flavin containing 1 (Aof1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	4632428N09Rik; AI482520; MGC38211	4632428N09Rik; AI482520; MGC38211
Mus musculus	RefSeq	ILMN_189760	ILMN_227015	AOF1	NM_172262.1	NM_172262.1		218214	26986558	NM_172262.1	Aof1	NP_758466.1	ILMN_1237236	004220682	S	1552	GAAGGTGGACGGATAACTGACCCCACTGTTGACAAACGCATGGACTTTCA	13	+	47163893-47163942	13qA5	Mus musculus amine oxidase, flavin containing 1 (Aof1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	4632428N09Rik; AI482520; MGC38211	4632428N09Rik; AI482520; MGC38211
Mus musculus	RefSeq	ILMN_189760	ILMN_227015	AOF1	NM_172262.1	NM_172262.1		218214	26986558	NM_172262.1	Aof1	NP_758466.1	ILMN_2632778	006480376	S	4007	GCTTTGTGTGCTATTTCAAGTATAAGTGAGTAATTTTCTCCCACTGAGTG	13	+	47179739-47179788	13qA5	Mus musculus amine oxidase, flavin containing 1 (Aof1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	4632428N09Rik; AI482520; MGC38211	4632428N09Rik; AI482520; MGC38211
Mus musculus	RefSeq	ILMN_223261	ILMN_223261	DYX1C1	NM_026314.2	NM_026314.2		67685	31560179	NM_026314.2	Dyx1c1	NP_080590.2	ILMN_2761563	005670349	S	1590	CTGTTGAAATTGCCAGGATACTACTGAGGAATCTACAGAATAGAATTTCC	9	+	72820541-72820590	9qD	Mus musculus dyslexia susceptibility 1 candidate 1 homolog (human) (Dyx1c1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	EKN1; 1700010I24Rik	EKN1; 1700010I24Rik
Mus musculus	RefSeq	ILMN_210135	ILMN_210135	OLFR1259	NM_146341.1	NM_146341.1		258338	22129615	NM_146341.1	Olfr1259	NP_666453.1	ILMN_1230644	001070114	S	859	CTCAGGAATGCTGAAGTAAAAAATGCAATCAAGAAGCTCTGGAGAAAAAA	2	-	89783362-89783411	2qE1	Mus musculus olfactory receptor 1259 (Olfr1259), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR232-9	MOR232-9
Mus musculus	MEEBO	ILMN_211196	ILMN_211196	KIFC2	scl47789.18.22_35	NM_010630.1			6754445	NM_010630.1	Kifc2		ILMN_2613504	005420376	S	1801	AACCAGCACAGCTCACGCTCCCACGCCCTAGTTACGCTGACTTTACGTGC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193380	ILMN_193380	TRPC1	NM_011643.2	NM_011643.2		22063	118130097	NM_011643.2	Trpc1	NP_035773.1	ILMN_2510943	002510324	S	872	TCGACTCTGAAGTAGTGGGAGCTGTTGATATACTACTTAATCATCGGCCA	9	-	95637265-95637314	9qE3.3	Mus musculus transient receptor potential cation channel, subfamily C, member 1 (Trpc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IPI]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IMP]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [evidence IDA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin [goid 46541] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 15279] [evidence IMP]	Trp1; Trrp1; Mtrp1	Trp1; Trrp1; Mtrp1
Mus musculus	RefSeq	ILMN_193380	ILMN_193380	TRPC1	NM_011643.2	NM_011643.2		22063	118130097	NM_011643.2	Trpc1	NP_035773.1	ILMN_1241563	003170458	S	2406	CAATGTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTC	9	-	95609087-95609136	9qE3.3	Mus musculus transient receptor potential cation channel, subfamily C, member 1 (Trpc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IPI]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IMP]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [evidence IDA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin [goid 46541] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 15279] [evidence IMP]	Trp1; Trrp1; Mtrp1	Trp1; Trrp1; Mtrp1
Mus musculus	RefSeq	ILMN_237439	ILMN_237439	ZFP157	NM_028130.2	NM_028130.2		72154	40254176	NM_028130.2	Zfp157	NP_082406.2	ILMN_2840247	002340041	S	5023	GCAAACGCTGTGCCAGTGTATAACTGGGATCATCAATGTGAACCTATCCC	5	+	138901669-138901718	5qG2	Mus musculus zinc finger protein 157 (Zfp157), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mszf23-1; A630094N24Rik; AI327407; mszf12; 2610020C11Rik	mszf23-1; A630094N24Rik; AI327407; mszf12; 2610020C11Rik
Mus musculus	RefSeq	ILMN_190039	ILMN_237439	ZFP157	NM_028130.2	NM_028130.2		72154	40254176	NM_028130.2	Zfp157	NP_082406.2	ILMN_1235580	006040255	S	3027	GCAGACTGCCTAGAGAAAAGATTTAGAGTAAGTGCCAGGAAACACTAGGG	5	+	138899673-138899722	5qG2	Mus musculus zinc finger protein 157 (Zfp157), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mszf23-1; A630094N24Rik; AI327407; mszf12; 2610020C11Rik	mszf23-1; A630094N24Rik; AI327407; mszf12; 2610020C11Rik
Mus musculus	Riken	ILMN_205578	ILMN_205578	A630085E08RIK	ri|A630085E08|PX00147M08|AK042364|2253					AK042364	A630085E08Rik		ILMN_1257440	002000682	S	2034	GTAAGCCATCTCCCCAGGGACCCAGGCATACAGATGCGCCTGGAAACACA										
Mus musculus	RefSeq	ILMN_215377	ILMN_215377	TAS2R107	NM_199154.1	NM_199154.1		387342	40255292	NM_199154.1	Tas2r107	NP_954605.1	ILMN_2658741	003890382	S	796	GCCACATGCCTCTATCCCTGCGGTCACTCAATCATCGTAATTTTAGGAAA	6	-	131609257-131609306	6qF3	Mus musculus taste receptor, type 2, member 107 (Tas2r107), mRNA.		The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mGR06; STC 5-1; Tas2r7; T2R07; mt2r43; T2R4	mGR06; STC 5-1; Tas2r7; T2R07; mt2r43; T2R4
Mus musculus	Riken	ILMN_203486	ILMN_203486	A930015D01RIK	ri|A930015D01|PX00066E20|AK044478|4387					AK044478	A930015D01Rik		ILMN_1253556	003060142	S	4019	GCTGGGGGCCAGGTTCAGTCTCTCATGTGTGTGTAGCAGGCACTTTACTC										
Mus musculus	RefSeq	ILMN_211079	ILMN_211079	GATA2	NM_008090.4	NM_008090.4		14461	142378318	NM_008090.4	Gata2	NP_032116.3	ILMN_2612283	002940681	S	3010	GCTGCAGAGCACCCTAACCGGAAGTAACTTATTTTGTGCTAGTACCCGCA	6	+	88156797-88156846	6qD1	Mus musculus GATA binding protein 2 (Gata2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; Any process that activates or increases angiogenesis [goid 45766] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IDA]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC129339; Gata-2	MGC129339; Gata-2
Mus musculus	MEEBO	ILMN_184328	ILMN_184328	HEMT1	scl10675.1.1_191				7110624	NM_010416	Hemt1		ILMN_2657905	006860215	S	229	GTCCCAGCAGGGTGTGGTCAGTGTGCTCATGTCAGACAACTCTAGTGGAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_184328	ILMN_184328	HEMT1	scl10675.1.1_191				7110624	NM_010416	Hemt1		ILMN_2417754	004290577	S	16	AACCCTTATACTGAATGTTATAAGCATTTTCTACTAATTCATCAGTTGGA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_222749	ILMN_222749	RPP25	NM_133982.1	NM_133982.1		102614	19527203	NM_133982.1	Rpp25	NP_598743.1	ILMN_2754222	005820195	S	1273	TAGGACAAAATCTGCCATGCTTCCTCCCCGAGTCCTGCTGGAGTCTTGCT	9	+	57353181-57353230	9qB	Mus musculus ribonuclease P 25 subunit (human) (Rpp25), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]	MGC102363; AI851155	MGC102363; AI851155
Mus musculus	RefSeq	ILMN_185655	ILMN_258582	DYRK3	NM_145508.2	NM_145508.2		226419	118130152	NM_145508.2	Dyrk3	NP_663483.1	ILMN_2699522	006510184	S	1782	GTCCGAAACCAGTGGTAGTATACCTCTGTGCAGTGTATTGCCAAAGCTGA	1	-	133025258-133025307	1qE4	Mus musculus dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 (Dyrk3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence ISA]	BC006704	BC006704
Mus musculus	RefSeq	ILMN_198789	ILMN_327398	LOC100046088	XM_001475553.1	XM_001475553.1		100046088	149272089	XM_001475553.1	LOC100046088	XP_001475603.1	ILMN_1246566	002480735	S	303	CAAGCTGGAGGAAGCAATGAAGACCCGGGAACTAGGCCAGTGTACGAAGT					PREDICTED: Mus musculus similar to developmental pluripotency associated 5 (LOC100046088), mRNA.					
Mus musculus	RefSeq	ILMN_219865	ILMN_219865	SEPT3	NM_011889.2	NM_011889.2		24050	117606374	NM_011889.2	Sept3	NP_036019.2	ILMN_1218471	004010152	S	2039	GCCTGTCTCTGACCTTTTATCTCCTTTTAGAGTCATCTATGTTAGCTTCC	15	+	82122180-82122229	15qE1	Mus musculus septin 3 (Sept3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AV154067; B530002E20Rik; 3110018K01Rik; Sep3	AV154067; B530002E20Rik; 3110018K01Rik; Sep3
Mus musculus	RefSeq	ILMN_219865	ILMN_219865	SEPT3	NM_011889.2	NM_011889.2		24050	117606374	NM_011889.2	Sept3	NP_036019.2	ILMN_1257919	001710369	S	1063	CATCCACTATGAGACTTACAGGGCCAAGAGGCTCAATGACAATGGAGGCC	15	+	82121204-82121253	15qE1	Mus musculus septin 3 (Sept3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AV154067; B530002E20Rik; 3110018K01Rik; Sep3	AV154067; B530002E20Rik; 3110018K01Rik; Sep3
Mus musculus	RefSeq	ILMN_215145	ILMN_325080	2310030N02RIK	NM_001085493.1	NM_001085493.1		76947	147906107	NM_001085493.1	2310030N02Rik	NP_001078962.1	ILMN_2656042	000160162	S	989	CCATTATCTTTGTATATTCAATCATGGAGAAAAAGATACTAAAATGATTT				4qA1	Mus musculus RIKEN cDNA 2310030N02 gene (2310030N02Rik), mRNA.				RP23-130H14.3	RP23-130H14.3
Mus musculus	RefSeq	ILMN_201020	ILMN_311087	LOC100041980	XM_001476551.1	XM_001476551.1		100041980	149273186	XM_001476551.1	LOC100041980	XP_001476601.1	ILMN_1250448	006940747	S	963	CGCCAGCGCCCTGGTTTGCAGAGAGGTACAACACAAATTTGAGGGGATAG	Y|NT_166349.1	+	24671-24720		PREDICTED: Mus musculus similar to putative, transcript variant 1 (LOC100041980), mRNA.					
Mus musculus	RefSeq	ILMN_198244	ILMN_198244	LOC381123	XM_355039.1	XM_355039.1			38083270	XM_355039.1	LOC381123		ILMN_1238375	001820039	S	18	CATTGAAGGCCTGTGCCCAGAAGCTCTGAAGAATTGGTTCCAGGATGATC										
Mus musculus	MEEBO	ILMN_211518	ILMN_211518	2010008E23RIK	scl40862.5_379	XM_126502.4			38091831	XM_126502.4	2010008E23Rik		ILMN_2616612	006960075	S	1781	AGAGCTCAGTCAGGAAGGGGAGTGGGGCAGAAGGCCAAGCCCCCAGCATT										
Mus musculus	MEEBO	ILMN_213482	ILMN_213482	9330180L21RIK	scl077268.1_18	NM_175254.2			31340739	NM_175254.2	9330180L21Rik		ILMN_2637449	002230280	S	24	CTCATGAACTTCGATGATTGCTTTGTATGAGAATGTATGTACTTGGGGAA										
Mus musculus	RefSeq	ILMN_200148	ILMN_200148	LOC385641	XM_358831.1	XM_358831.1			38080694	XM_358831.1	LOC385641		ILMN_1239935	003290192	S	1	TCCCTTACTCCAGTTCATTCACAAGCCTACACAACTTCTCGCCCTCAGCA										
Mus musculus	Riken	ILMN_203789	ILMN_203789	A230060F14RIK	ri|A230060F14|PX00128P17|AK038758|1889					AK038758	A230060F14Rik		ILMN_1240086	004830608	S	1713	CCTTGGCGCTGCCCTTAGGAACTTGAAGCTGAAGCCAACTCCTTTAGCCC										
Mus musculus	MEEBO	ILMN_191560	ILMN_191560	4631405K08RIK	scl15740.2_520						4631405K08Rik		ILMN_2480140	001230022	S	4	GAGCTGCCAGCGGTGGACTGAAGCACAGCATTTGAACAGAGGCATTCTGC										
Mus musculus	RefSeq	ILMN_212744	ILMN_212744	HSPA9	NM_010481.1	NM_010481.1		15526	6754255	NM_010481.1	Hspa9	NP_034611.1	ILMN_1222803	001190673	S	1978	GGCAGCATCTTCCCTACAGCAGGCGTCATTGAAACTCTTCGAAATGGCGT	18	-	35098245-35098294	18qB1	Mus musculus heat shock protein 9 (Hspa9), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	GRP75; mot-2; PBP74; Hspa9a; Hsp74; mthsp70; CSA; Hsc74; mot2; Hsp74a; mortalin; 74kDa	GRP75; mot-2; PBP74; Hspa9a; Hsp74; mthsp70; CSA; Hsc74; mot2; Hsp74a; mortalin; 74kDa
Mus musculus	RefSeq	ILMN_212744	ILMN_212744	HSPA9	NM_010481.1	NM_010481.1		15526	6754255	NM_010481.1	Hspa9	NP_034611.1	ILMN_2821196	003130598	S	2587	CTGTAGGTGCAGAAGCTAGGTCAGTGGATAGCAGTTGTGTTAGCCATAGC	18	-	35097446-35097495	18qB1	Mus musculus heat shock protein 9 (Hspa9), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	GRP75; mot-2; PBP74; Hspa9a; Hsp74; mthsp70; CSA; Hsc74; mot2; Hsp74a; mortalin; 74kDa	GRP75; mot-2; PBP74; Hspa9a; Hsp74; mthsp70; CSA; Hsc74; mot2; Hsp74a; mortalin; 74kDa
Mus musculus	MEEBO	ILMN_189887	ILMN_189887	A830006F12RIK	scl17838.4.1_217				31342955	NM_177164	A830006F12Rik		ILMN_1224331	004230601	S	4044	GGTCATGGGTTCACAAGGCCAGCCACACAACGAGACCCTAATTTACAAAA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	Riken	ILMN_203223	ILMN_203223	C030023A16RIK	ri|C030023A16|PX00074B11|AK047745|2102					AK047745	C030023A16Rik		ILMN_1250325	006020551	S	1755	TGTACAGAGACTTTGGCATCCCTGTGGGATTGGCTCCAAGACCTCCCACG										
Mus musculus	RefSeq	ILMN_217782	ILMN_217782	2410003P15RIK	NM_018888.1	NM_018888.1		56046	9256563	NM_018888.1	2410003P15Rik	NP_061376.1	ILMN_1236994	001940379	S	165	GTGTTTGGGATCAGAACAGACTGTTGGAGCGGACACAGCGCAGAATAGGA	2	-	155603192-155603241	2qH1	Mus musculus RIKEN cDNA 2410003P15 gene (2410003P15Rik), mRNA.				Bfzp; mbFZb; 2310079L17Rik; Bfzb; 3110038N19Rik	Bfzp; mbFZb; 2310079L17Rik; Bfzb; 3110038N19Rik
Mus musculus	RefSeq	ILMN_217782	ILMN_217782	2410003P15RIK	NM_018888.1	NM_018888.1		56046	9256563	NM_018888.1	2410003P15Rik	NP_061376.1	ILMN_2870950	000730367	S	2291	CATCTGGGCACTATTTACATAAACCAGAGGCGAGCCAGGCAGGGATTTGC	2	-	155538392-155538441	2qH1	Mus musculus RIKEN cDNA 2410003P15 gene (2410003P15Rik), mRNA.				Bfzp; mbFZb; 2310079L17Rik; Bfzb; 3110038N19Rik	Bfzp; mbFZb; 2310079L17Rik; Bfzb; 3110038N19Rik
Mus musculus	RefSeq	ILMN_185916	ILMN_209455	CACNA1H	NM_021415.3	NM_021415.3		58226	62739189	NM_021415.3	Cacna1h	NP_067390.3	ILMN_2431088	006620722	S	8115	CAACATTTAACCTGAATTTGTAGAACGGATGACATAAAGCAAATGGATGT	17	-	25511280-25511329	17qA3.3	Mus musculus calcium channel, voltage-dependent, T type, alpha 1H subunit (Cacna1h), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a low voltage-gated channel [goid 8332] [evidence ISS]	alpha13.2; MNCb-1209; Cav3.2	alpha13.2; MNCb-1209; Cav3.2
Mus musculus	RefSeq	ILMN_209455	ILMN_209455	CACNA1H	NM_021415.3	NM_021415.3		58226	62739189	NM_021415.3	Cacna1h	NP_067390.3	ILMN_1246201	004050026	S	8029	CCCTCCATCCCAGGCTGTCAGGCTCAGCGTTCATTTGACATCCATTTGCT	17	-	25511366-25511415	17qA3.3	Mus musculus calcium channel, voltage-dependent, T type, alpha 1H subunit (Cacna1h), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a low voltage-gated channel [goid 8332] [evidence ISS]	alpha13.2; MNCb-1209; Cav3.2	alpha13.2; MNCb-1209; Cav3.2
Mus musculus	RefSeq	ILMN_193302	ILMN_193302	USP21	NM_013919.3	NM_013919.3		30941	142347963	NM_013919.3	Usp21	NP_038947.1	ILMN_2495939	003310176	S	1884	GTGACACCATCTTGAAGCCCTGGCACCTGTGAAAACCTTCCCAACACCCT	1	-	173212296-173212342:173212343-173212345	1qH3	Mus musculus ubiquitin specific peptidase 21 (Usp21), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	Usp16; W53272; ESTM28; Usp23	Usp16; W53272; ESTM28; Usp23
Mus musculus	MEEBO	ILMN_195233	ILMN_195233	SEC63	scl38973.22_10				31981947	NM_153055	Sec63		ILMN_2694578	001740040	S	2441	ACGGATGCAAAAAAGAGGCCGCTGGTGCCAGGGTACGATCTGAAAAGGGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212360	ILMN_315824	4930481A15RIK	XM_001474642.1	XM_001474642.1		74931	149270299	XM_001474642.1	4930481A15Rik	XP_001474692.1	ILMN_1248737	002570632	S	282	GTCAGTAGTGCCGTGACCTCCAGCAAGCGTATGGCCTGGCAGTGGAGACT					PREDICTED: Mus musculus RIKEN cDNA 4930481A15 gene (4930481A15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_229061	ILMN_229061	OLFR1463	NM_001011840.1	NM_001011840.1		258120	58801439	NM_001011840.1	Olfr1463	NP_001011840.1	ILMN_3160480	003850575	S	546	GCCAGCACTCATGGCTCTCTCTTGCTCGGATAGGCATATCAATGAGCTAG	19	+	13309287-13309336	19qA	Mus musculus olfactory receptor 1463 (Olfr1463), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-29P	MOR202-29P
Mus musculus	RefSeq	ILMN_217613	ILMN_217613	TRIM61	NM_153110.2	NM_153110.2		260296	42476120	NM_153110.2	Trim61	NP_694750.2	ILMN_2685468	004050647	S	1838	TGCACAGTTGCAGATCTTGAGTGACAACAAGACAGAACAGCCGGTGGACA	8	-	67942184-67942210:67942211-67942233		Mus musculus tripartite motif-containing 61 (Trim61), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	E330039K03Rik; AU018704; C85201; Rnf35; 2czf61	E330039K03Rik; AU018704; C85201; Rnf35; 2czf61
Mus musculus	RefSeq	ILMN_254789	ILMN_254789	DEFB43	NM_001039121.1	NM_001039121.1		654458	84993766	NM_001039121.1	Defb43	NP_001034210.1	ILMN_3160578	002760768	S	112	GAGAATCAGGACTGTTCAAAGCACCGCCACTGCAGGATGAAGTGCAAAGC	14	+	63636629-63636678	14qD1	Mus musculus defensin beta 43 (Defb43), mRNA.				Defb43	Defb43
Mus musculus	RefSeq	ILMN_213607	ILMN_213607	STON2	NM_175367.4	NM_175367.4		108800	146198675	NM_175367.4	Ston2	NP_780576.1	ILMN_1226530	000450377	S	4012	CCGAAATAGAGTCATGGCTGTAATTTCATGTGTGTAGAAGAGACACTTGG				12qD3	Mus musculus stonin 2 (Ston2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4933401N24Rik	4933401N24Rik
Mus musculus	RefSeq	ILMN_217299	ILMN_217299	NIT2	NM_023175.1	NM_023175.1		52633	12963554	NM_023175.1	Nit2	NP_075664.1	ILMN_2944185	001090136	S	798	GGCTGAAATTCGGCAGCAAATCCCCATTTTAAAACAGAAACGAGCAGACC	16	-	57157216-57157265	16qC1.1	Mus musculus nitrilase family, member 2 (Nit2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]	1190017B19Rik; D16Ertd502e	1190017B19Rik; D16Ertd502e
Mus musculus	RefSeq	ILMN_217299	ILMN_217299	NIT2	NM_023175.1	NM_023175.1		52633	12963554	NM_023175.1	Nit2	NP_075664.1	ILMN_2681622	005570653	S	560	TCTTGGTGTATCCTGGAGCTTTCAATCTGACCACAGGACCAGCCCACTGG	16	-	57160199-57160248	16qC1.1	Mus musculus nitrilase family, member 2 (Nit2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]	1190017B19Rik; D16Ertd502e	1190017B19Rik; D16Ertd502e
Mus musculus	RefSeq	ILMN_222673	ILMN_222673	RPL36A	NM_019865.2	NM_019865.2		19982	31980964	NM_019865.2	Rpl36a	NP_063918.1	ILMN_2753219	004060504	S	385	GACCTTTCAACCCCTTTGATTGCAGTTGTTCGTTTGGGAGGGAATACATT	X	+	129934339-129934388	XqE3	Mus musculus ribosomal protein L36a (Rpl36a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rpl44; L44L	Rpl44; L44L
Mus musculus	RefSeq	ILMN_210714	ILMN_210714	DFFB	NM_007859.3	NM_007859.3		13368	141802948	NM_007859.3	Dffb	NP_031885.2	ILMN_2608441	003990612	S	2008	TGAAATGGGCATTTTATATATTTTGTAATGTTTGGATTTTTATATTTGCC	4	-	153338593-153338642	4qE2	Mus musculus DNA fragmentation factor, beta subunit (Dffb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Catalysis of the reaction: nicotinate D-ribonucleotide + diphosphate = nicotinate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4516] [evidence IDA]	CAD; DFF40; 40kDa; Didff; 5730477D02Rik; CPAN	CAD; DFF40; 40kDa; Didff; 5730477D02Rik; CPAN
Mus musculus	RefSeq	ILMN_219849	ILMN_219849	DMKN	NM_172899.2	NM_172899.2		73712	81230482	NM_172899.2	Dmkn	NP_766487.2	ILMN_3105563	003940682	A	1647	CGGGCACAACCTGGCCTGCTGAAGTGGCTGAAGTTTTGGTAGAACATTCC	7	+	30488599-30488640:30489500-30489507	7qB1	Mus musculus dermokine (Dmkn), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		cI-36; SK89; AW561900; 1110014F24Rik; SK30; C130074A08	cI-36; SK89; AW561900; 1110014F24Rik; SK30; C130074A08
Mus musculus	RefSeq	ILMN_219849	ILMN_219849	DMKN	NM_172899.2	NM_172899.2		73712	81230482	NM_172899.2	Dmkn	NP_766487.2	ILMN_3032088	000270358	I	1156	ATGATGTGCGCATGGCCGGAGGATCTGGGAGTCAGGGGCATGGGTCCAAT	7	+	30476156-30476190:30479793-30479807	7qB1	Mus musculus dermokine (Dmkn), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		cI-36; SK89; AW561900; 1110014F24Rik; SK30; C130074A08	cI-36; SK89; AW561900; 1110014F24Rik; SK30; C130074A08
Mus musculus	RefSeq	ILMN_197395	ILMN_245204	NEK10	XM_977900.1	XM_977900.1		238944	94396638	XM_977900.1	Nek10	XP_982994.1	ILMN_1213749	004040156	S	904	GACCCCACAGGTTCACCCAGCAGCTTTGAAGTGGAAGAGGGAGTCACATA				14qA2	PREDICTED: Mus musculus NIMA (never in mitosis gene a)- related kinase 10 (Nek10), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]		
Mus musculus	RefSeq	ILMN_245461	ILMN_245461	SLC2A13	NM_001033633.1	NM_001033633.1		239606	76880475	NM_001033633.1	Slc2a13	NP_001028805.1	ILMN_2925424	001170040	S	6156	CTCTAAGCATACATCTCTATCCAGTCAGGAGTCTCTTGCTGTCAGAGGTG	15	-	91095793-91095842	15qE3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 13 (Slc2a13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AI505012; A630029G22Rik; 6530403A04; Gm308	AI505012; A630029G22Rik; 6530403A04; Gm308
Mus musculus	RefSeq	ILMN_216038	ILMN_216038	AKP5	NM_007433.3	NM_007433.3		11650	124244097	NM_007433.3	Akp5	NP_031459.3	ILMN_2666607	006270048	S	1704	GTGCCTGTTGGCAGGGAAAATGTTGATGCTGATGGCGGCGGCTGAACCCT	1	-	88983624-88983673	1qD	Mus musculus alkaline phosphatase 5 (Akp5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum [goid 4035] [evidence IDA]	EAP; C77216; D1Ertd816e	EAP; C77216; D1Ertd816e
Mus musculus	Riken	ILMN_203793	ILMN_203793	CDK7	ri|A230093O07|PX00129B14|AK039084|1598					AK039084	Cdk7		ILMN_1250900	007560181	S	1407	CCCAGACCAGATGCTGCAGGAGCCACTTTCTTCAGGTGGTCATAGTCAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]		
Mus musculus	RefSeq	ILMN_195139	ILMN_227476	LOC677213	XM_001001408.2	XM_001001408.2		677213	149241210	XM_001001408.2	LOC677213	XP_001001408.2	ILMN_2512928	002690678	S	7088	AAACTGACTCGCCATGCGATGCACTGTTGATAGCTTCCTGATGTGTGGTG					PREDICTED: Mus musculus similar to U2AF homology motif (UHM) kinase 1 (LOC677213), mRNA.					
Mus musculus	RefSeq	ILMN_191690	ILMN_227476	LOC677213	XM_001001408.2	XM_001001408.2		677213	149241210	XM_001001408.2	LOC677213	XP_001001408.2	ILMN_1221869	001440112	S	948	GCACCCATGTGGCCACCCTTTATTTGTGCAGTAGGGCAGGTGCTGCTCTT					PREDICTED: Mus musculus similar to U2AF homology motif (UHM) kinase 1 (LOC677213), mRNA.					
Mus musculus	RefSeq	ILMN_186638	ILMN_237581	2310040C09RIK	NM_178618.3	NM_178618.3		69640	117647254	NM_178618.3	2310040C09Rik	NP_848733.2	ILMN_1256927	006620639	S	4695	GAGGATGGGAGAGAGTTGGCTGTGTGCCATGTTCAGATGTATGGTGGATG	11	+	61523361-61523410	11qB2	Mus musculus RIKEN cDNA 2310040C09 gene (2310040C09Rik), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI506990; RP23-278F12.4	AI506990; RP23-278F12.4
Mus musculus	MEEBO	ILMN_193092	ILMN_193092	A430042F24RIK	scl0319283.1_242						A430042F24Rik		ILMN_2494041	004570487	S	3	CCAGCTTGCTTTCGTTACCCTTCTGATAGCGATGTGCCTAGGACTGTGGG										
Mus musculus	RefSeq	ILMN_217448	ILMN_227610	4933408B17RIK	NM_177773.3	NM_177773.3		271508	142382686	NM_177773.3	4933408B17Rik	NP_808441.1	ILMN_1258744	002030400	S	2278	AATATTGCTCATATTTTTGTTGCATAGACTTAGAAGTAATTTGATTGAAC	18	-	34739534-34739583	18qB1	Mus musculus RIKEN cDNA 4933408B17 gene (4933408B17Rik), transcript variant hypothetical protein LOC271508, mRNA.					
Mus musculus	MEEBO	ILMN_190138	ILMN_190138	UTY	scl022290.1_14				6678526	NM_009484	Uty		ILMN_2517601	002070452	S	4	CCATCCTCGAATTTCATCTGACTGAAGGCTCCGGAGACATGCATTAACCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_204894	ILMN_244979	ARHGAP20	NM_175535.3	NM_175535.3		244867	47575839	NM_175535.3	Arhgap20	NP_780744.2	ILMN_1253370	002120019	S	1194	CCTGGACAACCTGCCCATGTCACCAACATCCCCTATGCCAGGACAGCTCT	9	+	51646977-51647026	9qA5.3	Mus musculus Rho GTPase activating protein 20 (Arhgap20), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	mKIAA1391; A530023E23Rik; 6530403F17Rik	mKIAA1391; A530023E23Rik; 6530403F17Rik
Mus musculus	RefSeq	ILMN_244979	ILMN_244979	ARHGAP20	NM_175535.3	NM_175535.3		244867	47575839	NM_175535.3	Arhgap20	NP_780744.2	ILMN_2959729	006100687	S	6312	CCAAGTCCATGCTGTCAAATAAAATGCCACCCTGCAGCTAACAGTCCCAC	9	+	51661112-51661161	9qA5.3	Mus musculus Rho GTPase activating protein 20 (Arhgap20), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	mKIAA1391; A530023E23Rik; 6530403F17Rik	mKIAA1391; A530023E23Rik; 6530403F17Rik
Mus musculus	RefSeq	ILMN_215678	ILMN_215678	HOXD3	NM_010468.2	NM_010468.2		15434	126517501	NM_010468.2	Hoxd3	NP_034598.2	ILMN_2662351	005720398	S	2093	AGACCTTAATTTATAATGCTCCGTCCCCTCCTGTAAAGATTGCATCGGAC	2	+	74585519-74585568	2qC3	Mus musculus homeo box D3 (Hoxd3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structure of the glossopharyngeal nerve is generated and organized. Morphogenesis pertains to the creation of form. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion [goid 21615] [evidence IGI]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-5.5; Hox-4.1	Hox-5.5; Hox-4.1
Mus musculus	Riken	ILMN_206083	ILMN_206083	PGLS	ri|E330004G19|PX00210D21|AK054257|2689					AK054257	Pgls		ILMN_1244761	003310427	S	2373	GGCCAATGGTCTGTCTCCAGGCTCAGTGAAGGACTGTATGAAGGGGATGA							The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate [goid 17057] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209187	ILMN_261868	MAT2A	NM_145569.4	NM_145569.4		232087	146149255	NM_145569.4	Mat2a	NP_663544.1	ILMN_2593368	004070296	S	318	CTTCTTGCTGGGGAAATTACATCCAGAGCTGCCATTGATTACCAGAAAGT				6qC1	Mus musculus methionine adenosyltransferase II, alpha (Mat2a), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism [goid 6556] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine [goid 4478] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC6545; D630045P18Rik	MGC6545; D630045P18Rik
Mus musculus	RefSeq	ILMN_209187	ILMN_261868	MAT2A	NM_145569.4	NM_145569.4		232087	146149255	NM_145569.4	Mat2a	NP_663544.1	ILMN_1248368	007050019	S	300	GCTAAAACTGGAATGATTCTTCTTGCTGGGGAAATTACATCCAGAGCTGC				6qC1	Mus musculus methionine adenosyltransferase II, alpha (Mat2a), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism [goid 6556] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine [goid 4478] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC6545; D630045P18Rik	MGC6545; D630045P18Rik
Mus musculus	RefSeq	ILMN_209187	ILMN_261868	MAT2A	NM_145569.4	NM_145569.4		232087	146149255	NM_145569.4	Mat2a	NP_663544.1	ILMN_1258415	003390274	S	1822	GTAGTTCTTTATCAGGGAGTGTTCCTATCCAATCAATCTTGCATGAAACG				6qC1	Mus musculus methionine adenosyltransferase II, alpha (Mat2a), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism [goid 6556] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine [goid 4478] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC6545; D630045P18Rik	MGC6545; D630045P18Rik
Mus musculus	RefSeq	ILMN_213063	ILMN_227423	CLEC4G	NM_029465.2	NM_029465.2		75863	142353398	NM_029465.2	Clec4g	NP_083741.1	ILMN_1234165	004780129	S	1152	CCTGCATCCCCCTATTTTACCCTCTGACTTGGAGATTTCTTCACACACAG	8	-	3716104-3716153	8qA1.1	Mus musculus C-type lectin domain family 4, member g (Clec4g), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930572L20Rik	4930572L20Rik
Mus musculus	RefSeq	ILMN_219571	ILMN_219571	MYF5	NM_008656.4	NM_008656.4		17877	144227215	NM_008656.4	Myf5	NP_032682.1	ILMN_2710656	001110154	S	1967	TATATACAGTACTTTGCCAATCATGAGCCAGGTTTTATTAACTATTTGTA	10	-	106920030-106920079	10qD1	Mus musculus myogenic factor 5 (Myf5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IGI]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Myf-5; B130010J22Rik	Myf-5; B130010J22Rik
Mus musculus	RefSeq	ILMN_221075	ILMN_221075	TIFAB	NM_145976.3	NM_145976.3		212937	142381297	NM_145976.3	Tifab	NP_666088.1	ILMN_3162163	007550762	S	3122	TTACAAACTTGGATCTTGGGGCGACTTGAACCCCAGTGATCTGGCTCCAG	13	-	56275242-56275291	13qB1	Mus musculus TRAF-interacting protein with forkhead-associated domain, family member B (Tifab), mRNA.				Tifab; MGC32345; MGC37193	Tifab; MGC32345; MGC37193
Mus musculus	RefSeq	ILMN_211660	ILMN_211660	SLC24A1	NM_144813.1	NM_144813.1		214111	21450182	NM_144813.1	Slc24a1	NP_659062.1	ILMN_2618257	002060039	S	5072	GGGAAAGAAAAGCAATGGTTCATTCTGGTGATGGAGGGTGGAGGTACTCA	9	-	64770759-64770808	9qC	Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 (Slc24a1), mRNA.				MGC27617	MGC27617
Mus musculus	MEEBO	ILMN_190459	ILMN_190459	BC037704	scl6186.1.1_212						BC037704		ILMN_2470360	003170390	S	17	GCAAACTTTTCCATCTTTTCGTAGCGCTTCCTTAGAACGGTTGGAGGCTT										
Mus musculus	RefSeq	ILMN_222126	ILMN_256156	ENTPD8	NM_028093.1	NM_028093.1		72090	112821697	NM_028093.1	Entpd8	NP_082369.1	ILMN_2744998	005420482	S	1921	CCCCTGACCTTTAAGGACTCCAGTCCATCAATTGGGCCAGGAGGGCCAAT	2	+	24940854-24940903	2qA3	Mus musculus ectonucleoside triphosphate diphosphohydrolase 8 (Entpd8), mRNA. XM_976205 XM_986744	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a nucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with diphosphate on its glycose moiety [goid 9133] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a nucleoside monophosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with phosphate on its glycose moiety [goid 9124] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IDA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IDA]		
Mus musculus	Riken	ILMN_204929	ILMN_204929	MPDZ	ri|D130079L03|PX00186D16|AK051782|1385					AK051782	Mpdz		ILMN_1248363	005820154	S	1321	GTAGAGAAGCTTGCTTTGTGTCTTCCAGCCTTAACCCAGATTCCCGTGTG						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217262	ILMN_260155	BC016579	NM_145389.1	NM_145389.1		212998	21703777	NM_145389.1	BC016579	NP_663364.1	ILMN_2681156	006220288	S	2120	AAGTAACAAAGAATTTTAATATATAACGATCTACAAACATTTACAATAAA	16	-	45626983-45627032	16qB5	Mus musculus cDNA sequence, BC016579 (BC016579), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			MGC27720	MGC27720
Mus musculus	Riken	ILMN_204071	ILMN_204071	A730001L02RIK	ri|A730001L02|PX00148L11|AK042530|794					AK042530	A730001L02Rik		ILMN_1251844	004730129	S	579	CACGGAGGCTGCTGTGTGGGCTGGAATCAGACGGAAATCTCCAAACAACC										
Mus musculus	MEEBO	ILMN_188833	ILMN_188833	SCL33870.2_144	scl33870.2_144	NM_001005863.1			54312128	NM_001005863.1	scl33870.2_144		ILMN_2456129	002230131	S	10	ATCCTGGAGTCCAGAGGGTGGGTAAAGATAGAGCTAGAAGCCCCCGGGGT										
Mus musculus	MEEBO	ILMN_188833	ILMN_188833	SCL33870.2_144	scl33870.2_144	NM_001005863.1			54312128	NM_001005863.1	scl33870.2_144		ILMN_2459676	000240044	S	4	GCCTGTGCGCCTGGATACACTGCCTCATTTTTCAACAAGCGCAAACTTCG										
Mus musculus	RefSeq	ILMN_222606	ILMN_322432	LOC100048504	XM_001480708.1	XM_001480708.1		100048504	149254511	XM_001480708.1	LOC100048504	XP_001480758.1	ILMN_2752206	003940538	S	3208	CTTGCTGCTGTTACTCATTTCTGGATTTGGGGGCAGGGAGCAGTGCAGGA					PREDICTED: Mus musculus hypothetical protein LOC100048504, transcript variant 1 (LOC100048504), mRNA.					
Mus musculus	Riken	ILMN_206948	ILMN_206948	INPP5E	ri|D630025F24|PX00197L01|AK085439|2788					AK085439	Inpp5e		ILMN_1250592	001230671	S	2135	CCAGGTGAAAGTGAGGCCAGGACGAGACAAGAATTAAAAGGCGGATTTCA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IDA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212382	ILMN_212382	RHOBTB2	NM_153514.4	NM_153514.4		246710	141803249	NM_153514.4	Rhobtb2	NP_705734.3	ILMN_1246859	002690475	S	2327	TGGCCGACTGGTGTCTTCACCATATCTGCACCAACTACAACAACGTGTGC	14	-	70187698-70187747	14qD2	Mus musculus Rho-related BTB domain containing 2 (Rhobtb2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Dbc2; MGC28699; E130206H14Rik; mKIAA0717	Dbc2; MGC28699; E130206H14Rik; mKIAA0717
Mus musculus	RefSeq	ILMN_212382	ILMN_212382	RHOBTB2	NM_153514.4	NM_153514.4		246710	141803249	NM_153514.4	Rhobtb2	NP_705734.3	ILMN_1238898	001690008	S	5038	GTGTTGTCTTAGAGGATGGGGGTAAAAACACAAACCCACAACCCCTCTCC	14	-	70184865-70184914	14qD2	Mus musculus Rho-related BTB domain containing 2 (Rhobtb2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Dbc2; MGC28699; E130206H14Rik; mKIAA0717	Dbc2; MGC28699; E130206H14Rik; mKIAA0717
Mus musculus	RefSeq	ILMN_212382	ILMN_212382	RHOBTB2	NM_153514.4	NM_153514.4		246710	141803249	NM_153514.4	Rhobtb2	NP_705734.3	ILMN_1228970	006280170	S	2873	GGGGAGCAGGAGAGAGCTCAGAGCTCGGATATTTTCTCTCTGGACTTGAC	14	-	70187030-70187079	14qD2	Mus musculus Rho-related BTB domain containing 2 (Rhobtb2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Dbc2; MGC28699; E130206H14Rik; mKIAA0717	Dbc2; MGC28699; E130206H14Rik; mKIAA0717
Mus musculus	RefSeq	ILMN_207535	ILMN_207535	LOC280487	XM_203701.3	XM_203701.3			38083769	XM_203701.3	LOC280487		ILMN_1260582	006290441	I	923	GCCTTGGCTCTGTCTGGACAGGTCCAGATACAACTAGATGTATTATGACA										
Mus musculus	MEEBO	ILMN_190659	ILMN_190659	A630012P03RIK	scl54934.5.1_22				31342638	NM_177032	A630012P03Rik		ILMN_2472165	000510458	S	12	CCTTTGGGAAAGAGTGTTCATTCATCCATCGCAGCCAGCAGGCCAGTGCA										
Mus musculus	MEEBO	ILMN_190659	ILMN_190659	A630012P03RIK	scl54934.5.1_22				31342638	NM_177032	A630012P03Rik		ILMN_2617016	003850544	S	2823	GTTTTTATAAGGTGTTGGAGTGGATCCATATTTGCTGAGGCTTTCTACAG										
Mus musculus	RefSeq	ILMN_223483	ILMN_223483	MT3	NM_013603.1	NM_013603.1		17751	7305286	NM_013603.1	Mt3	NP_038631.1	ILMN_2764651	005310747	S	24	AGGAACCAAGCTACGGCGGCTGCTGGACTGGATATGGACCCTGAGACCTG	8	+	96676667-96676699:96676700-96676716	8qC5	Mus musculus metallothionein 3 (Mt3), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]	The regulation of the levels, transport, and metabolism of metal ions within a cell or between a cell and its external environment [goid 6875] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50768] [evidence IDA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IDA]	Mt-3	Mt-3
Mus musculus	MEEBO	ILMN_220928	ILMN_220928	4931422A03RIK	scl18929.5.1_98				31340965	NM_175161	4931422A03Rik		ILMN_2776204	005310494	S	820	AATGATGCGGACATGGCTGCTGCAACCCGTACTCACACACGGGGACCTTC										
Mus musculus	RefSeq	ILMN_188711	ILMN_185832	TOB2	NM_020507.3	NM_020507.3		57259	108796647	NM_020507.3	Tob2	NP_065253.1	ILMN_2455063	001070288	S	207	GCGGGGATGGCGGACCCGAGGATGGCACCCGTCACGCGGTGGATGGAGGC	15	-	81688500-81688549	15qE1	Mus musculus transducer of ERBB2, 2 (Tob2), mRNA.		Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IMP]	Interacting selectively with the vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes [goid 42809] [evidence IPI]	AV071822; 2900090N22Rik; mKIAA1663; 4930545K18Rik	AV071822; 2900090N22Rik; mKIAA1663; 4930545K18Rik
Mus musculus	RefSeq	ILMN_185832	ILMN_185832	TOB2	NM_020507.3	NM_020507.3		57259	108796647	NM_020507.3	Tob2	NP_065253.1	ILMN_1228501	001440433	S	3031	TTCTCCAGCTTGCCCATCATTCTCGGCGCCCACACAGGTGACAGTCCCAA	15	-	81679613-81679662	15qE1	Mus musculus transducer of ERBB2, 2 (Tob2), mRNA.		Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IMP]	Interacting selectively with the vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes [goid 42809] [evidence IPI]	AV071822; 2900090N22Rik; mKIAA1663; 4930545K18Rik	AV071822; 2900090N22Rik; mKIAA1663; 4930545K18Rik
Mus musculus	RefSeq	ILMN_194556	ILMN_255109	TMEM141	NM_001040130.2	NM_001040130.2		51875	142387859	NM_001040130.2	Tmem141	NP_001035219.1	ILMN_2507494	007050603	S	718	GAAGACTACTGCTGCACCAAATCCAGGACCTGCCAGCTCGGAACAAGGCT	2	-	25475808-25475857	2qA3	Mus musculus transmembrane protein 141 (Tmem141), mRNA. XM_979169	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1110065P14Rik; D2Ertd217e; AI663999	1110065P14Rik; D2Ertd217e; AI663999
Mus musculus	Riken	ILMN_205670	ILMN_205670	C130043L16RIK	ri|C130043L16|PX00169G01|AK048255|3579					AK048255	C130043L16Rik		ILMN_1246624	005890368	S	3511	GCTCAAGAAGAAGGAAGACCAAAGTGTGACTGCTTCAGTCCTTAGAAGGG										
Mus musculus	Riken	ILMN_203909	ILMN_203909	SLIT3	ri|9530096I22|PX00115O01|AK035727|2203					AK035727	Slit3		ILMN_2560903	006020669	S	1845	GTCTAAACCCTGAGTGGCAGGGGAGGGACAGAGACAACACTGGACCCAAT						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IGI]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200032	ILMN_310984	LOC677180	XR_034122.1	XR_034122.1		677180	149267879	XR_034122.1	LOC677180		ILMN_1222339	007650750	S	619	AGTGGTCTGCTGGCCATGGTGGGCTCTGCGATGATGGGGCGCATCCTGTT					PREDICTED: Mus musculus similar to translocase of inner mitochondrial membrane 17 homolog B (yeast) (LOC677180), misc RNA.					
Mus musculus	RefSeq	ILMN_221757	ILMN_243326	GMPS	NM_001033300.2	NM_001033300.2		229363	85861217	NM_001033300.2	Gmps	NP_001028472.2	ILMN_1225161	006350167	S	1852	CCTCCTACAGATGTTACTCCAACTTTTTTGACAACAGGAGTGCTCAGTAC	3	+	63818210-63818259	3qE1	Mus musculus guanine monphosphate synthetase (Gmps), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + xanthosine 5'-phosphate + L-glutamine + H2O = AMP + diphosphate + GMP + L-glutamate [goid 3922] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + xanthosine 5'-phosphate + NH3 = AMP + diphosphate + GMP [goid 3921] [evidence ISO]	AA591640; AI047208	AA591640; AI047208
Mus musculus	RefSeq	ILMN_219454	ILMN_219454	SCYL1	NM_023912.2	NM_023912.2		78891	118130697	NM_023912.2	Scyl1	NP_076401.1	ILMN_2954195	007320735	S	2422	TGGAAGCCAAACGGGCAGAGAAAAAGACCACCAAGGGGCCCATGAAGCTG	19	-	5758592-5758641	19qA	Mus musculus SCY1-like 1 (S. cerevisiae) (Scyl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	2810011O19Rik; Ntkl; C85140; p105	2810011O19Rik; Ntkl; C85140; p105
Mus musculus	RefSeq	ILMN_235731	ILMN_235731	LDB3	NM_001039074.2	NM_001039074.2		24131	122056488	NM_001039074.2	Ldb3	NP_001034163.1	ILMN_3071312	007200102	I	37	GGACCAGAGATAGGGGCTGGGAAGATAGGCTGCATAAGGGTCCTCTCACC	14	-	35401707-35401756	14qB	Mus musculus LIM domain binding 3 (Ldb3), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with protein kinase C [goid 5080] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271
Mus musculus	RefSeq	ILMN_223716	ILMN_224990	HSF2BP	XM_484622.4	XM_484622.4		74377	149268656	XM_484622.4	Hsf2bp	XP_484622.3	ILMN_2768077	003190278	S	2636	CCCTTCTGTTCTGAGCACATTCTAAGCAAGTATCTTTGGGCAGATTCTCC	17	-	32081895-32081944	17qB1	PREDICTED: Mus musculus heat shock transcription factor 2 binding protein (Hsf2bp), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]			
Mus musculus	RefSeq	ILMN_187749	ILMN_257636	DLK1	NM_010052.4	NM_010052.4		13386	145966863	NM_010052.4	Dlk1	NP_034182.2	ILMN_1244618	002850020	S	1200	TGTTGCAGTATAACAGCGGCGAGGAGCTGGCGGTCAATATCATCTTCCCC				12qF1	Mus musculus delta-like 1 homolog (Drosophila) (Dlk1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ZOG; AW742678; FA1; Peg9; pG2; pref-1; Ly107; SCP1	ZOG; AW742678; FA1; Peg9; pG2; pref-1; Ly107; SCP1
Mus musculus	RefSeq	ILMN_187749	ILMN_257636	DLK1	NM_010052.4	NM_010052.4		13386	145966863	NM_010052.4	Dlk1	NP_034182.2	ILMN_2771738	004260241	S	1408	GTGGTGGAGTTTGCTCTATTGTGTGGAATCGAGTGAACGCTATGCTTACA				12qF1	Mus musculus delta-like 1 homolog (Drosophila) (Dlk1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ZOG; AW742678; FA1; Peg9; pG2; pref-1; Ly107; SCP1	ZOG; AW742678; FA1; Peg9; pG2; pref-1; Ly107; SCP1
Mus musculus	MEEBO	ILMN_196029	ILMN_196029	PIAS1	scl35719.15_153				31543477	NM_019663	Pias1		ILMN_2737776	000020209	S	3765	GTCTTCCCCTACGCATGTGTGTTCCACACAGAAACGGCTGTGTTAGAGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201533	ILMN_201533	RNF12	NM_011276.3	NM_011276.3		19820	47078288	NM_011276.3	Rnf12	NP_035406.3	ILMN_2684450	005720156	S	3850	GGTCTTTAACCAAATGAGCTAACTACCCAGGTTAGTCCAGTACTCTAGAA	X	-	101156041-101156090	XqD	Mus musculus ring finger protein 12 (Rnf12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW743871; AL022832; Ha1r; RLIM	AW743871; AL022832; Ha1r; RLIM
Mus musculus	MEEBO	ILMN_189463	ILMN_189463	MT-CYTB	scl0017711.1_140						mt-Cytb		ILMN_1239479	001500440	S	8	CCTTTCCTTCATACCTCAAAGCAACGAAGCCTAATATTCCGCCCAATCAC						The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216614	ILMN_216614	4930403L05RIK	NM_026128.1	NM_026128.1		67395	13385637	NM_026128.1	4930403L05Rik	NP_080404.1	ILMN_2803156	000380626	S	445	GGAACCAGTTATCAGGGTGAGGAGCAAGAAAGCAGCGGTGCGCATAGCAG	X	-	14267956-14268005	XqA1.1	Mus musculus RIKEN cDNA 4930403L05 gene (4930403L05Rik), mRNA.					
Mus musculus	Riken	ILMN_204284	ILMN_204284	9630026C21RIK	ri|9630026C21|PX00115N18|AK036003|1650					AK036003	9630026C21Rik		ILMN_1221323	003990707	S	1441	CCTCCAGAAAGGAGGAGGATACAAGACTGAGAGCAGAAGCTGTTTGCCCA										
Mus musculus	RefSeq	ILMN_218437	ILMN_218437	MYO1G	NM_178440.2	NM_178440.2		246177	31340731	NM_178440.2	Myo1g	NP_848534.1	ILMN_2810405	007200356	S	3111	GCCAGAGCAGCCTGAGCCAGATTTCCAAAGCAGCCGTAGCACCTTTACCC	11	-	6406697-6406746	11qA1	Mus musculus myosin IG (Myo1g), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	myosin 1G; E430002D17Rik	myosin 1G; E430002D17Rik
Mus musculus	RefSeq	ILMN_244008	ILMN_244008	TATDN2	NM_001033463.1	NM_001033463.1		381801	75677455	NM_001033463.1	Tatdn2	NP_001028635.1	ILMN_2907499	003370605	S	2394	CTCAGCGCACCAGGATGTTACCTTGGACCCTCATCACAAGGCTTCACTTG	6	+	113676593-113676642	6qE3	Mus musculus TatD DNase domain containing 2 (Tatdn2), mRNA.				mKIAA0218; KIAA0218; AI646012	mKIAA0218; KIAA0218; AI646012
Mus musculus	MEEBO	ILMN_193403	ILMN_193403	4932416A11RIK	scl24612.2_398				31559908	NM_147776	4932416A11Rik		ILMN_1227576	005860161	S	236	TGGTGCACGTGGGCAGCCAGCCTCACACAGAGTTTACTTTTGACCAGTAC										
Mus musculus	RefSeq	ILMN_214544	ILMN_214544	CLNS1A	NM_023671.1	NM_023671.1		12729	19263323	NM_023671.1	Clns1a	NP_076160.1	ILMN_2691798	001990280	S	1096	CTGGGCGGAAGGGACGTGCGGAAGCTTAGATGTCTCTGGGATTCAGGAGA	7	+	104867038-104867087	7qE2	Mus musculus chloride channel, nucleotide-sensitive, 1A (Clns1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]		ICLN; Clci; 2610100O04Rik; 2610036D06Rik; Clcni	ICLN; Clci; 2610100O04Rik; 2610036D06Rik; Clcni
Mus musculus	RefSeq	ILMN_214544	ILMN_214544	CLNS1A	NM_023671.1	NM_023671.1		12729	19263323	NM_023671.1	Clns1a	NP_076160.1	ILMN_2649083	006420411	S	61	TTCCTCAAAAGCTTTCCGCCGCCTGGGTCGGCCGACGGGCTCCGGCTGCA	7	+	104845261-104845310	7qE2	Mus musculus chloride channel, nucleotide-sensitive, 1A (Clns1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]		ICLN; Clci; 2610100O04Rik; 2610036D06Rik; Clcni	ICLN; Clci; 2610100O04Rik; 2610036D06Rik; Clcni
Mus musculus	RefSeq	ILMN_214544	ILMN_214544	CLNS1A	NM_023671.1	NM_023671.1		12729	19263323	NM_023671.1	Clns1a	NP_076160.1	ILMN_3005080	003370730	S	1100	GCGGAAGGGACGTGCGGAAGCTTAGATGTCTCTGGGATTCAGGAGAACTC	7	+	104867042-104867091	7qE2	Mus musculus chloride channel, nucleotide-sensitive, 1A (Clns1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]		ICLN; Clci; 2610100O04Rik; 2610036D06Rik; Clcni	ICLN; Clci; 2610100O04Rik; 2610036D06Rik; Clcni
Mus musculus	RefSeq	ILMN_185226	ILMN_236593	SERPINA7	NM_177920.4	NM_177920.4		331535	46849769	NM_177920.4	Serpina7	NP_808588.2	ILMN_1225985	005900100	S	1096	AAAGAGGGAGCTTCTCCTGAAGTTGGGTCTCTGGATCAGCAGGAAGTACC	X	-	135614935-135614984	XqF1	Mus musculus serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 (Serpina7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	TBG; C730040N12Rik	TBG; C730040N12Rik
Mus musculus	Riken	ILMN_205615	ILMN_205615	D030067L12RIK	ri|D030067L12|PX00181K23|AK083690|1985					AK083690	D030067L12Rik		ILMN_1234351	003370491	S	1770	GGGTCTAGAGGAGGATCAAGCATACCGTGTAGAGGACACCAAGCTGTAAG										
Mus musculus	RefSeq	ILMN_196919	ILMN_196919	LOC381271	XM_358540.1	XM_358540.1			38049570	XM_358540.1	LOC381271		ILMN_1236862	001340129	S	151	GGAGCTACACAGCAGGAGGATTGCTTCAAGGGCAGCTTGGACTACACAGC										
Mus musculus	MEEBO	ILMN_209154	ILMN_209154	MBTPS2	scl0002990.1_657	NM_172307.1			26986628	NM_172307.1	Mbtps2		ILMN_1235967	004260072	S	2072	GTTTGAAAGCAGGGCCTTACTTATGCTACTTAGGCTAAGCTTGCCTGTCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186701	ILMN_186701	TULP1	NM_021478.1	NM_021478.1		22157	33468972	NM_021478.1	Tulp1	NP_067453.1	ILMN_3003476	003290044	S	1947	GGGACGATGGTGAAGCAGAGCCAGGGACCCACATCCCCAATAAAGTCACG	17	-	28493391-28493395:28494350-28494394	17qA3.3	Mus musculus tubby like protein 1 (Tulp1), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]	A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [evidence IMP]	Tulp1l	Tulp1l
Mus musculus	RefSeq	ILMN_186701	ILMN_186701	TULP1	NM_021478.1	NM_021478.1		22157	33468972	NM_021478.1	Tulp1	NP_067453.1	ILMN_1236774	006020328	S	1665	ACAGCTCCTCAGCGCTGGGAAAGCATTCGGTTGGGGGTGGCAAGGTCCCT	17	-	28494908-28494957	17qA3.3	Mus musculus tubby like protein 1 (Tulp1), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]	A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [evidence IMP]	Tulp1l	Tulp1l
Mus musculus	RefSeq	ILMN_186701	ILMN_186701	TULP1	NM_021478.1	NM_021478.1		22157	33468972	NM_021478.1	Tulp1	NP_067453.1	ILMN_1216269	001430053	S	1164	TTCACGGTCTTTGACAACGGGCAGAACCCACAGCGAGGGGGAGGTGGTGA	17	-	28496212-28496261	17qA3.3	Mus musculus tubby like protein 1 (Tulp1), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]	A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [evidence IMP]	Tulp1l	Tulp1l
Mus musculus	RefSeq	ILMN_217485	ILMN_217485	SPNB4	NM_032610.2	NM_032610.2		80297	116174792	NM_032610.2	Spnb4	NP_115999.2	ILMN_2683757	005890382	S	62	AACGCCCGCAGGGAGGGCGGTGCTGCGCGGCGAGCATCCGGGACCGCATC	7	-	28231497-28231546	7qA3	Mus musculus spectrin beta 4 (Spnb4), mRNA.	Portion of the neuronal cell soma from which the axon originates [goid 43203] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence ISS]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ankyrin, a 200 kDa cytoskeletal protein that attaches other cytoskeletal proteins to integral membrane proteins [goid 30506] [evidence ISS]	lnd; 5830426A08Rik; dyn; SpbIV; ROSA62; qv; nmf261; 1700022P15Rik; nmf379	lnd; 5830426A08Rik; dyn; SpbIV; ROSA62; qv; nmf261; 1700022P15Rik; nmf379
Mus musculus	MEEBO	ILMN_211450	ILMN_211450	1600012P17RIK	scl16075.4_88				51705310	XM_484930	1600012P17Rik		ILMN_1220650	006550327	S	1835	GTGTAGTTTTGGGTTTCCTCCTCTTGCTCCGATGCCTATTCAGCACAGGC										
Mus musculus	RefSeq	ILMN_197872	ILMN_197872	LOC195534	XM_112241.7	XM_112241.7		195534	94410055	XM_112241.7	LOC195534	XP_112241.7	ILMN_2903234	000630754	S	50	GCTGTGATCGTCTACAAAATCATTGCATACATGGAAAGTATGGGAAGGCC					PREDICTED: Mus musculus similar to zinc finger protein 300 (LOC195534), mRNA.					
Mus musculus	MEEBO	ILMN_186447	ILMN_186447	WWP1	scl24523.27_25				51709071	XM_130163	Wwp1		ILMN_1243215	000060270	S	16	AGGAAATCACCCATTGCCTGTGTCTATAGTATGTTGGCCTCCTTTTTCCT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]		
Mus musculus	MEEBO	ILMN_186447	ILMN_186447	WWP1	scl24523.27_25				51709071	XM_130163	Wwp1		ILMN_2543006	002600220	S	787	ACCCAAAAATGCTCCAGCTCCAAAGCCAGTCACATCTGCGCCCACCAGTG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]		
Mus musculus	MEEBO	ILMN_209440	ILMN_209440	C76746	scl0098136.1_252				31341416	NM_178881	C76746		ILMN_2595784	004610259	S	2866	TCTGATGTATGTGTAACAGCCCACTGTGTTTATCCATTAATTGGAGACAC										
Mus musculus	RefSeq	ILMN_197532	ILMN_197532	LOC277157	XM_204841.1	XM_204841.1			25030259	XM_204841.1	LOC277157		ILMN_2588061	004730097	S	298	TCCTTCCCTGATGCTCACACAGGCTCCTTCCCTGATGCTCACACAGGCTC										
Mus musculus	RefSeq	ILMN_216590	ILMN_216590	RFX3	NM_011265.2	NM_011265.2		19726	34328188	NM_011265.2	Rfx3	NP_035395.2	ILMN_2708609	001690626	S	659	GGCGATTGAGACGCTGCAAAAGTCTGACGGTCTGTCCACTCACAGAAGCT	19	-	27911914-27911963	19qC1	Mus musculus regulatory factor X, 3 (influences HLA class II expression) (Rfx3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MRFX3; C230093O12Rik	MRFX3; C230093O12Rik
Mus musculus	RefSeq	ILMN_190098	ILMN_235511	MITF	NM_008601.2	NM_008601.2		17342	118130671	NM_008601.2	Mitf	NP_032627.1	ILMN_1241965	006020592	S	1563	TTCTATTTTACAACTACAAAGGCCTCCTAAGTATTGTACCTTCAGCGTGC	6	+	97968343-97968392	6qD3	Mus musculus microphthalmia-associated transcription factor (Mitf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISS]; The continuous turnover of bone matrix and mineral that involves first, an increase in resorption (osteoclastic activity) and later, reactive bone formation (osteoblastic activity). The process of bone remodeling takes place in the adult skeleton at discrete foci. The process ensures the mechanical integrity of the skeleton throughout life and plays an important role in calcium homeostasis. An imbalance in the regulation of bone resorption and bone formation results in many of the metabolic bone diseases, such as osteoporosis [goid 46849] [evidence IMP]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Any process that modulates the frequency, rate or extent of osteoclast differentiation [goid 45670] [evidence IGI]; Any process that modulates the frequency, rate or extent of osteoclast differentiation [goid 45670] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]	MGC124309; MGC124310; wh; vit; mi; bw; vitiligo	MGC124309; MGC124310; wh; vit; mi; bw; vitiligo
Mus musculus	RefSeq	ILMN_199824	ILMN_199824	LOC383062	XM_356831.1	XM_356831.1			38077699	XM_356831.1	LOC383062		ILMN_2536614	000060358	S	120	AGAAGCAGCTGAGCAGTTTAAATTAATCCAAGCTGCATATGACGTCTTAA										
Mus musculus	RefSeq	ILMN_223925	ILMN_247860	PSMA1	NM_011965.2	NM_011965.2		26440	124377996	NM_011965.2	Psma1	NP_036095.1	ILMN_2777591	003290685	S	1119	ATACCAATGTTTTTATATGAAGAAAATAAGTGTCTTTGCAGTTTTAAAGA	7	-	121408150-121408199	7qF1	Mus musculus proteasome (prosome, macropain) subunit, alpha type 1 (Psma1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	alpha-type; C2	alpha-type; C2
Mus musculus	RefSeq	ILMN_213517	ILMN_213517	SF3B3	NM_133953.2	NM_133953.2		101943	118498348	NM_133953.2	Sf3b3	NP_598714.1	ILMN_1237140	000050592	S	3808	GTCCAAGAAGCTTGAGGACATTAGGACCCGCTATGCCTTCTGAACCCGTC	8	-	113334833-113334840:113334841-113334882	8qE1	Mus musculus splicing factor 3b, subunit 3 (Sf3b3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	SAP130; AA409318; D8Ertd633e; 5730409A01Rik; RSE1; 1810061H24Rik; mKIAA0017	SAP130; AA409318; D8Ertd633e; 5730409A01Rik; RSE1; 1810061H24Rik; mKIAA0017
Mus musculus	RefSeq	ILMN_211095	ILMN_222295	LCORL	NM_178142.3	NM_178142.3		209707	141802056	NM_178142.3	Lcorl	NP_835278.1	ILMN_1248192	007330201	S	694	GGAGTGTTAGATCTCTCTACAAAGAAAACCAGCATAAAGTCTGAAGAGTC	5	-	46127008-46127057	5qB3	Mus musculus ligand dependent nuclear receptor corepressor-like (Lcorl), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]	Mlr1; A830039H10Rik	Mlr1; A830039H10Rik
Mus musculus	RefSeq	ILMN_201258	ILMN_201258	LOC386552	XM_359396.1	XM_359396.1			38090206	XM_359396.1	LOC386552		ILMN_1234274	003990162	S	286	GAGCCTCAGCAGAGTCCTGGAAGCCGGCGGCTGGCCTTCGGGTTGCCTAA										
Mus musculus	Riken	ILMN_204909	ILMN_204909	C130060B01RIK	ri|C130060B01|PX00170P07|AK048425|3207					AK048425	C130060B01Rik		ILMN_1217147	001710075	S	2756	CTCTTTGGGCATCTTCCTCACAGTCCAGTTTCAGTGCAGTTCTGACAGCC										
Mus musculus	RefSeq	ILMN_211530	ILMN_315176	4933428M09RIK	XM_001473792.1	XM_001473792.1		71248	149272216	XM_001473792.1	4933428M09Rik	XP_001473842.1	ILMN_2616736	006770136	S	897	AGATCATCTAACACTCATTACCATACGGCAAATTGATGACCGTCCTATTC				XqF1	PREDICTED: Mus musculus RIKEN cDNA 4933428M09 gene (4933428M09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221586	ILMN_248370	OLFR697	NM_146599.1	NM_146599.1		258592	22129454	NM_146599.1	Olfr697	NP_666810.1	ILMN_1223349	001770014	S	501	TTTCTGCAAATCGAGGCATATCAGACACCTCTTCTGTGAGATCCCTCCCT	7	-	113884896-113884945	7qE3	Mus musculus olfactory receptor 697 (Olfr697), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR283-5	MOR283-5
Mus musculus	RefSeq	ILMN_213991	ILMN_213991	CHST8	NM_175140.3	NM_175140.3		68947	31982166	NM_175140.3	Chst8	NP_780349.2	ILMN_2643049	004590113	S	1995	CCTTGTACCAAACCACGTGGTTTGCTGCTTTTCTATGACCCAGGGTCATC	7	-	35459804-35459853	7qB1	Mus musculus carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 (Chst8), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 30166] [evidence IDA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence TAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-acetyl-D-galactosamine = adenosine 3',5'-bisphosphate + N-acetyl-D-galactosamine 4-sulfate [goid 1537] [evidence IDA]	AI426009; 1500011J21Rik	AI426009; 1500011J21Rik
Mus musculus	RefSeq	ILMN_223364	ILMN_223364	BC005624	NM_144885.1	NM_144885.1		227707	21450248	NM_144885.1	BC005624	NP_659134.1	ILMN_2763077	006350601	S	1122	CTACTGGGATTTTAGACCCCCCACCCCCTGCATTTTCAAGCACTAACTTT	2	-	30828454-30828503	2qB	Mus musculus cDNA sequence BC005624 (BC005624), mRNA.				RP23-221O14.10; MGC11690	RP23-221O14.10; MGC11690
Mus musculus	RefSeq	ILMN_223364	ILMN_223364	BC005624	NM_144885.1	NM_144885.1		227707	21450248	NM_144885.1	BC005624	NP_659134.1	ILMN_1248400	006270402	S	1123	TACTGGGATTTTAGACCCCCCACCCCCTGCATTTTCAAGCACTAACTTTG	2	-	30828453-30828502	2qB	Mus musculus cDNA sequence BC005624 (BC005624), mRNA.				RP23-221O14.10; MGC11690	RP23-221O14.10; MGC11690
Mus musculus	Riken	ILMN_203505	ILMN_203505	E430001K23RIK	ri|E430001K23|PX00096I08|AK087972|2653					AK087972	E430001K23Rik		ILMN_1214288	005550427	S	2565	CACGGAAATGTCCTTGGCCTGGGTCGACCGCCAGGGGACTTCGCTTTCCT										
Mus musculus	RefSeq	ILMN_210310	ILMN_210310	1810022C23RIK	NM_026947.4	NM_026947.4		69123	142387253	NM_026947.4	1810022C23Rik	NP_081223.1	ILMN_2604310	004200279	S	906	GAGAAACAAAAGCTATACACCGTGAATGCCGAAGAGTGCGCTGCAGCCCT	13	-	35038873-35038922	13qA3.3	Mus musculus RIKEN cDNA 1810022C23 gene (1810022C23Rik), mRNA.			Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212359	ILMN_229096	AP1M1	NM_007456.3	NM_007456.3		11767	145966804	NM_007456.3	Ap1m1	NP_031482.1	ILMN_2770926	005390026	S	1443	CCTCAAGCCTGAGTGGACTCACACAGAACCCCTTCCCTGGTCCCATTCTG				8qB3.3	Mus musculus adaptor-related protein complex AP-1, mu subunit 1 (Ap1m1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mu1A; [m]1A; Adtm1A; AA408894; Cltnm; AP47	mu1A; [m]1A; Adtm1A; AA408894; Cltnm; AP47
Mus musculus	RefSeq	ILMN_205267	ILMN_250723	FRMD5	NM_172673.3	NM_172673.3		228564	115298679	NM_172673.3	Frmd5	NP_766261.2	ILMN_1227858	002690414	S	232	GAGCAGGTTGATGAGCGGCAGCAGCAGGAGTCTGGAGCGCGAGTACAGCT	2	-	121632512-121632561	2qE5	Mus musculus FERM domain containing 5 (Frmd5), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	5830442F04; RP23-273B19.4; A930004K21Rik; R75430; 1500032A09Rik	5830442F04; RP23-273B19.4; A930004K21Rik; R75430; 1500032A09Rik
Mus musculus	MEEBO	ILMN_185581	ILMN_185581	OSM	scl41888.6_402				51766264	XM_137493	Osm		ILMN_2543107	000240491	S	930	CAGACTCTGGGGCCTCACGGTCCACTACAACACCAGATGTCTTTAATACC						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of meiosis [goid 45835] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The process of introducing a phosphate group to a tyrosine residue of a Stat1 protein [goid 42508] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42503] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a Stat5 protein [goid 42506] [evidence IDA]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISO]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	Riken	ILMN_203764	ILMN_203764	A130033H05RIK	ri|A130033H05|PX00122N04|AK037652|2571					AK037652	A130033H05Rik		ILMN_2559799	001690471	S	2359	TCCCATAGGAACAGAGAGGCCATTTAAAGCCGTGAGCGTGCAATGAGAGC										
Mus musculus	RefSeq	ILMN_216307	ILMN_216307	GPR64	NM_178712.3	NM_178712.3		237175	119943141	NM_178712.3	Gpr64	NP_848827.1	ILMN_3113571	007150044	A	4337	GTGACAAGGGGGAGCAGCTACTGGGAAGAGTGAATTATCCTGTGATATTG	X	+	156935622-156935671	XqF4	Mus musculus G protein-coupled receptor 64 (Gpr64), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AW212196; Me6; B830041D06Rik	AW212196; Me6; B830041D06Rik
Mus musculus	RefSeq	ILMN_223881	ILMN_229739	CYP2C68	NM_001039555.1	NM_001039555.1		433247	88319957	NM_001039555.1	Cyp2c68	NP_001034644.1	ILMN_2770944	005700376	S	1467	TGTGCTTTATCCCTGTAGAATGAAGATAATAAAATAGAAGTGAAGATGAG	19	-	39763531-39763558:39763559-39763580	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 688 (Cyp2c68), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	9030012A22Rik	9030012A22Rik
Mus musculus	RefSeq	ILMN_201289	ILMN_239643	1700091H14RIK	XM_983279.2	XM_983279.2		73553	149265413	XM_983279.2	1700091H14Rik	XP_988373.2	ILMN_1231139	002600270	S	61	ATACACACAGACACTAGACCAAGGCAGAAGGAGGCCGGCCGCCCATCATG	14	-	43432164-43432213	14qB	PREDICTED: Mus musculus RIKEN cDNA 1700091H14 gene (1700091H14Rik), mRNA.					
Mus musculus	MEEBO	ILMN_190598	ILMN_190598	5230400J09RIK	scl21365.7.752_29				33859784	NM_172474	5230400J09Rik		ILMN_2759003	007610201	S	1529	TCGCACTTGAGGGATGACTGGATCAGATAGGAAGTGAGCATTGGCCAGCA										
Mus musculus	RefSeq	ILMN_208768	ILMN_208768	KRTAP16-3	NM_130872.2	NM_130872.2		170653	31340563	NM_130872.2	Krtap16-3	NP_570942.1	ILMN_2856457	003610296	S	77	CAGACTGGGCTGTGGCTCTGGCTATGGAAGCTATGGATATGGCTCTGGCT					Mus musculus keratin associated protein 16-3 (Krtap16-3), mRNA.					
Mus musculus	RefSeq	ILMN_201755	ILMN_220829	STAB1	NM_138672.2	NM_138672.2		192187	154240683	NM_138672.2	Stab1	NP_619613.2	ILMN_2544343	002320414	S	7953	CTGGACAGACCATTGGCCCCCTCAGCCACCCTGACAAGCAATAAAAATGG				14qB	Mus musculus stabilin 1 (Stab1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA0246; STAB-1; MS-1; mKIAA0246; FEEL-1	KIAA0246; STAB-1; MS-1; mKIAA0246; FEEL-1
Mus musculus	RefSeq	ILMN_220829	ILMN_220829	STAB1	NM_138672.2	NM_138672.2		192187	154240683	NM_138672.2	Stab1	NP_619613.2	ILMN_2727432	002490286	S	7748	CCTGGTTTCTGTCCCCAACCCTGTTTTTGGCAGCAGTGACATCTTTTGTG				14qB	Mus musculus stabilin 1 (Stab1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA0246; STAB-1; MS-1; mKIAA0246; FEEL-1	KIAA0246; STAB-1; MS-1; mKIAA0246; FEEL-1
Mus musculus	RefSeq	ILMN_210779	ILMN_324396	HERC5	XM_001478484.1	XM_001478484.1		67138	149255197	XM_001478484.1	Herc5	XP_001478534.1	ILMN_2609101	005220593	S	1317	CTGGAGAGAATAATCTCATTGATGTGGACTTAAAACTGGCAAGAGATGTC	6	+	57568612-57568661	6qB3	PREDICTED: Mus musculus hect domain and RLD 5, transcript variant 1 (Herc5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence ISO]	Interacting selectively with cyclins, proteins whose levels in a cell varies markedly during the cell cycle, rising steadily until mitosis, then falling abruptly to zero. As cyclins reach a threshold level, they are thought to drive cells into G2 phase and thus to mitosis [goid 30332] [evidence ISO]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISO]		
Mus musculus	RefSeq	ILMN_245485	ILMN_245485	SERPINA4-PS1	NR_002861.1	NR_002861.1		321018	84872153	NR_002861.1	Serpina4-ps1		ILMN_2815450	003890541	S	3777	GGCCCCTGACACCAAGAGCAATACAGGAGGGCATGGGGCTAGATGGGTTT	12	+	105325003-105325052	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 4, pseudogene 1 (Serpina4-ps1), non-coding RNA.				KALps; Klst	KALps; Klst
Mus musculus	RefSeq	ILMN_228450	ILMN_228450	RBL2	NM_011250.2	NM_011250.2		19651	31560552	NM_011250.2	Rbl2	NP_035380.2	ILMN_3009354	002710594	S	179	CCGAGCCATCAGATCCAGCAGCGGTTCGAGGAGTTGTGCAGCCGCCTCAA	8	+	93594186-93594235	8qC5	Mus musculus retinoblastoma-like 2 (Rbl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	p130; Rb2	p130; Rb2
Mus musculus	RefSeq	ILMN_211657	ILMN_211657	TMEM176B	NM_023056.3	NM_023056.3		65963	142372371	NM_023056.3	Tmem176b	NP_075543.1	ILMN_1259470	003450180	S	1562	CTCACGCCAATGTCCTTTCTTCCACGAACAGATATTATGTCATTTTATCC	6	-	48785578-48785627	6qB2.3	Mus musculus transmembrane protein 176B (Tmem176b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		Lr8; Clast1; 1810009M01Rik	Lr8; Clast1; 1810009M01Rik
Mus musculus	MEEBO	ILMN_189200	ILMN_189200	DGKH	scl0380921.1_1				51768541	XM_484397	Dgkh		ILMN_2459211	006220056	S	5	CTCAGCACAACGGACTGCGAGGGATGAGGTGTACGCAGCTCATAAACGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]	The chemical reactions and pathways involving diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues. DAG is a normal intermediate in the biosynthesis of phosphatidyl phospholipids and is released from them by phospholipase C activity. DAG from phosphatidyl inositol polyphosphates is important in signal transduction [goid 46339] [evidence ISO]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence ISO]		
Mus musculus	RefSeq	ILMN_204992	ILMN_250029	C230040D10RIK	XM_976346.1	XM_976346.1		244281	94384573	XM_976346.1	C230040D10Rik	XP_981440.1	ILMN_1229073	005720181	S	6988	CTAGGGACGCTGCATGACTCTCTTGCTATGTGCCCGACTGGCTGTCACGT				8qA1.1	PREDICTED: Mus musculus RIKEN cDNA C230040D10 gene (C230040D10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214057	ILMN_214057	FPR2	NM_008039.2	NM_008039.2		14289	50345973	NM_008039.2	Fpr2	NP_032065.1	ILMN_1242457	007650048	S	1090	TCAAGCACCAGTTCTACTTCACCTCCTGCAGACATTGAGTTAAAGGCCCC	17	+	18030710-18030759	17qA3.2	Mus musculus formyl peptide receptor 2 (Fpr2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	E330010I07Rik; MGC151443	E330010I07Rik; MGC151443
Mus musculus	RefSeq	ILMN_209903	ILMN_209903	SERPINB1C	NM_173051.1	NM_173051.1		380839	46395463	NM_173051.1	Serpinb1c	NP_766639.1	ILMN_1254229	007510296	S	1264	CAGAATCAAACTTGACTTTATTTTGTAAGAAAGAGCACAACTCCATTGGC	13	-	32973551-32973600	13qA3.2	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 1c (Serpinb1c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence ISA]	ovalbumin; EIC; MGC129308	ovalbumin; EIC; MGC129308
Mus musculus	RefSeq	ILMN_214265	ILMN_214265	TMEM11	NM_173453.2	NM_173453.2		216821	141801759	NM_173453.2	Tmem11	NP_775655.1	ILMN_2646138	004220435	S	1075	CTGAGCAGTGGAGTATGGATAGGAGCCAATGCTACTTTCTGAGGGGTGTG	11	-	60678046-60678095	11qB2	Mus musculus transmembrane protein 11 (Tmem11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5730466P16Rik; AA409091	5730466P16Rik; AA409091
Mus musculus	RefSeq	ILMN_194227	ILMN_231568	BMP8B	NM_007559.4	NM_007559.4		12164	146149090	NM_007559.4	Bmp8b	NP_031585.2	ILMN_1229350	002470008	S	2565	CCTGAAGACCCCCAACAAATTGAGACTAAACCCAGTAGGCTTCTCGGGAC				4qD2.2	Mus musculus bone morphogenetic protein 8b (Bmp8b), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence TAS]	Op3	Op3
Mus musculus	RefSeq	ILMN_237073	ILMN_237073	NFKBIA	NM_010907.1	NM_010907.1		18035	6754839	NM_010907.1	Nfkbia	NP_035037.1	ILMN_3001914	000150022	S	606	TACAATGGCCACACGTGTCTGCACCTAGCCTCTACTCACGGCTACCTGGC	12	-	56591795-56591844	12qC1	Mus musculus nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha (Nfkbia), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the Notch signaling pathway [goid 45746] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [evidence IMP]		Nfkbi; AI462015	Nfkbi; AI462015
Mus musculus	Riken	ILMN_205688	ILMN_205688	FBXL5	ri|E230011P14|PX00209L22|AK054009|3837					AK054009	Fbxl5		ILMN_1220195	001580494	S	3681	GGGAGGCAGGATGATGGTATGTGTGTAAAGTCATGTCACTTGCCTCAAGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218746	ILMN_218746	MTA1	NM_054081.2	NM_054081.2		116870	91598895	NM_054081.2	Mta1	NP_473422.2	ILMN_1225235	005310427	S	2175	CTGCCGCTGCGGCCACCCCCACCTGCACCAGTCAATGATGAGCCCATTGT	12	+	114361429-114361445:114361329-114361361	12qF1	Mus musculus metastasis associated 1 (Mta1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC118456	MGC118456
Mus musculus	Riken	ILMN_205547	ILMN_205547	E330014F24RIK	ri|E330014F24|PX00212M11|AK054313|1575					AK054313	E330014F24Rik		ILMN_1255765	003290424	S	1340	TGCCAGTTCCAGGACAGTTGACTCTCCCTTCTAACCAACTCTGGCACCAG										
Mus musculus	RefSeq	ILMN_246163	ILMN_246163	ETV5	NM_023794.2	NM_023794.2		104156	24528549	NM_023794.2	Etv5	NP_076283.2	ILMN_2938047	004860494	S	3122	GGAATTTGCTGTCCTTGACACTCCACACATTGTGTTCCTCACGTGTGGGA	16	-	22382036-22382085	16qB1	Mus musculus ets variant gene 5 (Etv5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	ERM; 1110005E01Rik; 8430401F14Rik	ERM; 1110005E01Rik; 8430401F14Rik
Mus musculus	RefSeq	ILMN_230701	ILMN_230701	3110007F17RIK	NM_028426.1	NM_028426.1		73061	110625949	NM_028426.1	3110007F17Rik	NP_082702.1	ILMN_2867158	004250646	S	531	TCTGCTCCAGGTTGCAAATGTTGTTGGTCTGGTTGGGACAGTTTGTTCTG	X	+	120256513-120256562	XqE3	Mus musculus RIKEN cDNA 3110007F17 gene (3110007F17Rik), mRNA.				RP24-559I10.1	RP24-559I10.1
Mus musculus	Riken	ILMN_202406	ILMN_202406	2610028F08RIK	ri|2610028F08|ZX00034E03|AK011587|1098					AK011587	2610028F08Rik		ILMN_2549371	003370204	S	728	GGTGGTGCTGTGGTCCAAGACATCTAAAGCCAGGCTGCCTCAGAGTTCCT										
Mus musculus	RefSeq	ILMN_256383	ILMN_256383	TMEM102	NM_001033433.1	NM_001033433.1		380705	85701934	NM_001033433.1	Tmem102	NP_001028605.1	ILMN_2919882	003930731	S	1400	TGGGCGGGTCCACTGGTCTCTGAATCGGCCTCTTTCTACCTAGTGCCGGG	11	-	69620281-69620330	11qB3	Mus musculus transmembrane protein 102 (Tmem102), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4632403M07Rik	4632403M07Rik
Mus musculus	RefSeq	ILMN_208639	ILMN_208639	6720456B07RIK	NM_133937.1	NM_133937.1		101314	19527153	NM_133937.1	6720456B07Rik	NP_598698.1	ILMN_2706857	006620554	S	578	CCTACAGCTCCCATGGCCTCTACACTGATTTCTGTCAACAGTCGGCCTTC	6	+	113566428-113566477	6qE3	Mus musculus RIKEN cDNA 6720456B07 gene (6720456B07Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW011779	AW011779
Mus musculus	RefSeq	ILMN_208639	ILMN_208639	6720456B07RIK	NM_133937.1	NM_133937.1		101314	19527153	NM_133937.1	6720456B07Rik	NP_598698.1	ILMN_2958417	001770477	S	725	CTGGGAGCTCAAAGCCAGGCCCCCAGTTGGCTTGAAGGGACATTTTCAGT	6	+	113566575-113566624	6qE3	Mus musculus RIKEN cDNA 6720456B07 gene (6720456B07Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW011779	AW011779
Mus musculus	RefSeq	ILMN_213591	ILMN_213591	OLFR933	NM_146441.1	NM_146441.1		258433	33239215	NM_146441.1	Olfr933	NP_666652.1	ILMN_1259113	004210398	S	563	CCTGCTCTGACATAAAGCTGAATGAGCTTCTTCTATTCATCATTGCAGGC	9	+	38783825-38783874	9qA5.1	Mus musculus olfactory receptor 933 (Olfr933), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR171-22	MOR171-22
Mus musculus	RefSeq	ILMN_216476	ILMN_216476	RHO	NM_145383.1	NM_145383.1		212541	21717804	NM_145383.1	Rho	NP_663358.1	ILMN_1228510	003140121	S	3065	GCGAGTGCCAGCAAGGGGTTATTTGCTTGCTCTCTCCATCAGTGATGAGG	6	+	115888677-115888726	6qE3	Mus musculus rhodopsin (Rho), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The series of events in which a light stimulus (in the form of photons) is received and converted into a molecular signal [goid 9583] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence IMP]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Opn2; RP4; MGC25387; Ops; MGC21585; Noerg1	Opn2; RP4; MGC25387; Ops; MGC21585; Noerg1
Mus musculus	Riken	ILMN_201766	ILMN_201766	2310007G05RIK	ri|2310007G05|ZX00052E05|AK009204|1092					AK009204	2310007G05Rik		ILMN_1237606	006900598	S	918	GTGCATAGGTGGTCTCTGACCTGAACATCACAGTGCGGAGAAAGCCCGGC										
Mus musculus	RefSeq	ILMN_220444	ILMN_220444	NOS2	NM_010927.3	NM_010927.3		18126	146134510	NM_010927.3	Nos2	NP_035057.1	ILMN_1223499	003870754	S	3546	CTTCGGTGCAGTCTTTTCCTATGGGGCAAAAAAGGGCAGCGCCTTGGAGG				11qB5	Mus musculus nitric oxide synthase 2, inducible (Nos2), mRNA.	The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6527] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IDA]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IMP]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]	Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with a tetrahydrobiopterin, 5,6,7,8-tetrahydrobiopterin or a derivative thereof; tetrahydrobiopterins are enzyme cofactors that carry electrons in redox reactions [goid 34617] [evidence IDA]; Interacting selectively with 2-amino-5-(carbamimidamido)pentanoic acid [goid 34618] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+ [goid 4517] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence TAS]	iNOS; Nos2a; NOS-II; Nos-2; i-NOS	iNOS; Nos2a; NOS-II; Nos-2; i-NOS
Mus musculus	Riken	ILMN_205694	ILMN_205694	B430216N15RIK	ri|B430216N15|PX00071B02|AK046642|2279					AK046642	B430216N15Rik		ILMN_1255967	003130554	S	1845	GGCAGGCCACGTTGTCCAAGGACAGACTCGGATGAGACAGCATCAATTCG										
Mus musculus	MEEBO	ILMN_190626	ILMN_190626	PPP1R14C	scl5592.4.1_113				19311013	NM_133485	Ppp1r14c		ILMN_2471848	001400228	S	4	CTCTGCATAGCCGACAATCCCCTAATGAGTCACTTGGACTTACAGTGGGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA];  [goid 4865] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184338	ILMN_184338	VIPR1	NM_011703.3	NM_011703.3		22354	142367730	NM_011703.3	Vipr1	NP_035833.2	ILMN_2417824	006620307	S	663	ACATCCACATGCATCTCTTCATGTCCTTCATCCTGAGGGCCACCGCCGTC	9	+	121570537-121570586	9qF4	Mus musculus vasoactive intestinal peptide receptor 1 (Vipr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4999] [evidence IEA]	VPAC1; VIP-R1	VPAC1; VIP-R1
Mus musculus	RefSeq	ILMN_184338	ILMN_184338	VIPR1	NM_011703.3	NM_011703.3		22354	142367730	NM_011703.3	Vipr1	NP_035833.2	ILMN_1231649	000990079	S	2501	ATGGCTTCTAATCCAAACTGGTGTCAGCGGGCTCTTCTCAGAGCTGCACC	9	+	121579671-121579720	9qF4	Mus musculus vasoactive intestinal peptide receptor 1 (Vipr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4999] [evidence IEA]	VPAC1; VIP-R1	VPAC1; VIP-R1
Mus musculus	MEEBO	ILMN_209225	ILMN_209225	OLFR875	scl0258744.1_1				22129346	NM_146749	Olfr875		ILMN_1223838	005550180	S	542	TCCCCTTCTTGAGCTCTCCTGTAGCAACACCTTCACAAATGAGCTTGTAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_211220	ILMN_211220	AP3M2	NM_029505.1	NM_029505.1		64933	17505211	NM_029505.1	Ap3m2	NP_083781.1	ILMN_2912598	003180475	S	3256	CATGGGTACTGCCAAGCCTCGCCAACCCCACCCAGTGATTGTCAGCAAAG	8	-	24252975-24253024	8qA2	Mus musculus adaptor-related protein complex 3, mu 2 subunit (Ap3m2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5830445E16Rik; AP-3B	5830445E16Rik; AP-3B
Mus musculus	RefSeq	ILMN_188854	ILMN_188854	ZFP61	NM_009561.2	NM_009561.2		22719	121247403	NM_009561.2	Zfp61	NP_033587.2	ILMN_1227451	000450538	S	1107	ATAAGTGTTCCCATCCACTCCGGAAGGCCCCCACTTCCCACTTTGAGAGC	7	-	25077255-25077304	7qA3	Mus musculus zinc finger protein 61 (Zfp61), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188854	ILMN_188854	ZFP61	NM_009561.2	NM_009561.2		22719	121247403	NM_009561.2	Zfp61	NP_033587.2	ILMN_2475363	006520390	S	2035	GTGGGAAAGGCTATACTCTGAATTCAAATCTCCAAGTCCACTTGAGAGTC	7	-	25076327-25076376	7qA3	Mus musculus zinc finger protein 61 (Zfp61), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220017	ILMN_315899	LOC100043389	XM_001480755.1	XM_001480755.1		100043389	149262577	XM_001480755.1	LOC100043389	XP_001480805.1	ILMN_1256414	006250376	S	70	CCTAGGCCTCCCAGCTCCCAAATGACAGAGAGCCTACTGTGTGAACTCAT	11	+	120090355-120090404	11qE2	PREDICTED: Mus musculus hypothetical protein LOC100043389 (LOC100043389), mRNA.					
Mus musculus	RefSeq	ILMN_194604	ILMN_229897	E030019B13RIK	XM_976924.1	XM_976924.1		104798	94392860	XM_976924.1	E030019B13Rik	XP_982018.1	ILMN_1255650	001440328	S	501	CAGCTGCTAGCGTGTGATGAGGCTTTTAATTCGTTACACTATAATACCCC	12	-	57591623-57591672	12qC1	PREDICTED: Mus musculus RIKEN cDNA E030019B13 gene (E030019B13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215350	ILMN_215350	MUSTN1	NM_181390.2	NM_181390.2		66175	141802278	NM_181390.2	Mustn1	NP_852055.1	ILMN_2658461	002570193	S	297	CCAAGAGCGTGTTTGGCTGAGACATGCACATTGCACCATCCACCCGGACA	14	+	31694197-31694216:31694217-31694246	14qB	Mus musculus musculoskeletal, embryonic nuclear protein 1 (Mustn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]			Mustang; 1110028G01Rik; MGC151316; MGC151318	Mustang; 1110028G01Rik; MGC151316; MGC151318
Mus musculus	RefSeq	ILMN_249230	ILMN_249230	OLFR99	NM_146515.1	NM_146515.1		258508	33239261	NM_146515.1	Olfr99	NP_666726.1	ILMN_2811562	000130400	S	355	AGGTATGCCGCTATCTGTCATCCACTGCGCTACTCAGCTCTCATGACTCC	17	-	37465617-37465666	17qB1	Mus musculus olfactory receptor 99 (Olfr99), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC123490; MOR156-1; MGC123489	MGC123490; MOR156-1; MGC123489
Mus musculus	RefSeq	ILMN_196325	ILMN_227363	2310001H12RIK	XM_901486.2	XM_901486.2		69504	94375241	XM_901486.2	2310001H12Rik	XP_906579.2	ILMN_1232900	003990722	S	2350	CTTGGCCCATGACAAGTGGCAGTAGTAGGGAGTGTGGCCTTTCTGGCATA					PREDICTED: Mus musculus RIKEN cDNA 2310001H12 gene, transcript variant 21 (2310001H12Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196325	ILMN_227363	2310001H12RIK	XM_901486.2	XM_901486.2		69504	94375241	XM_901486.2	2310001H12Rik	XP_906579.2	ILMN_2720620	007550184	S	651	GGAGACCTACAGGAACCTCAATGCTGTAGGCTACAATTGGGAAGACAGTA					PREDICTED: Mus musculus RIKEN cDNA 2310001H12 gene, transcript variant 21 (2310001H12Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187319	ILMN_187319	TRPM7	NM_021450.1	NM_021450.1		58800	10946829	NM_021450.1	Trpm7	NP_067425.1	ILMN_2443085	003610523	S	6514	AGCCATGATAAATAAGAATTAACTCACTGTTCAATGGGTGTTTCCTGTGA	2	-	126617825-126617874	2qF1	Mus musculus transient receptor potential cation channel, subfamily M, member 7 (Trpm7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The binding of a cell to the extracellular matrix via adhesion molecules that require the presence of calcium for the interaction [goid 16340] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CHAK; Ltrpc7; CHAK1; TRP-PLIK; 5033407O22Rik; Ltpr7; 4833414K03Rik; 2310022G15Rik	CHAK; Ltrpc7; CHAK1; TRP-PLIK; 5033407O22Rik; Ltpr7; 4833414K03Rik; 2310022G15Rik
Mus musculus	RefSeq	ILMN_198847	ILMN_198847	LOC234050	XM_150046.1	XM_150046.1			20859985	XM_150046.1	LOC234050		ILMN_1213111	001500441	S	473	AGAGCAGTGGGCAGAGAGTGGAGCAAGCCATTGCAGACACCAGAGACGTG										
Mus musculus	Riken	ILMN_205376	ILMN_205376	MSI2H	ri|D130027C15|PX00183M14|AK051269|2050					AK051269	Msi2h		ILMN_1234842	006940040	S	1846	CTAAGGGGCCGTTTGCCAGAGCTTGTGATTGGCAGGCAGGCTGGGAAGCC										
Mus musculus	RefSeq	ILMN_223089	ILMN_223089	LGTN	NM_010709.1	NM_010709.1		16865	33859573	NM_010709.1	Lgtn	NP_034839.1	ILMN_2814333	003190427	S	1678	TGTCAGGCAAGCACCATCGTCTCTCCTGCCCCTGGGGCCAAAGACAGTCT	1	+	132998556-132998605	1qE4	Mus musculus ligatin (Lgtn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	D1Ertd5e	D1Ertd5e
Mus musculus	Riken	ILMN_205963	ILMN_205963	C230078O04RIK	ri|C230078O04|PX00176I18|AK048886|1887					AK048886	C230078O04Rik		ILMN_1227346	006900274	S	1568	GCCAGGGAAAATCTACCGATGCCGAGAGGATGGGGGTGGAGTGCCTTGAT										
Mus musculus	Riken	ILMN_204341	ILMN_204341	A930009E11RIK	ri|A930009E11|PX00065P12|AK044361|1971					AK044361	A930009E11Rik		ILMN_2564227	004220762	S	1739	TCAGTACAGAGTAGCCTTGCGGAGTCTGAAGAACCTGGGACCCTGTCCAG										
Mus musculus	RefSeq	ILMN_210582	ILMN_210582	RBM38	NM_019547.1	NM_019547.1		56190	9507074	NM_019547.1	Rbm38	NP_062420.1	ILMN_2926155	001410424	S	1495	TGCAGAGGTGCCCATCAGGGCGAGTTCTCAGGTGTCTGTTGCTGTGCCAT	2	+	172677422-172677471	2qH3	Mus musculus RNA binding motif protein 38 (Rbm38), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rnpc1; Seb4l; Seb4	Rnpc1; Seb4l; Seb4
Mus musculus	RefSeq	ILMN_188118	ILMN_248525	TTLL8	NM_172818.2	NM_172818.2		239591	142357245	NM_172818.2	Ttll8	NP_766406.1	ILMN_2623434	001240026	S	2683	CACCACCCACTGCGTCAGGTAACCATAGAGACTCTTCGCCTTTCTGTCCC	15	-	88744563-88744612	15qE3	Mus musculus tubulin tyrosine ligase-like family, member 8 (Ttll8), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Ttll8; 4933401B17	Ttll8; 4933401B17
Mus musculus	RefSeq	ILMN_193893	ILMN_235716	LOC633273	XM_919047.2	XM_919047.2		633273	149274555	XM_919047.2	LOC633273	XP_924140.2	ILMN_1231915	003870240	S	159	GCACTGGGTGAAGCAGAGTCATGCAAAGAGTCTAGAGTGGATTGGAGTTA					PREDICTED: Mus musculus hypothetical LOC633273, transcript variant 2 (LOC633273), mRNA.					
Mus musculus	RefSeq	ILMN_219705	ILMN_219705	LIN28	NM_145833.1	NM_145833.1		83557	22003877	NM_145833.1	Lin28	NP_665832.1	ILMN_2992814	002490113	S	3427	CCCTTCTCTTCCCTGGGAAAATAAAGACTTATTGGTACTCCAGAGTTGGT	4	-	133559248-133559297	4qD3	Mus musculus lin-28 homolog (C. elegans) (Lin28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lin28a; Lin-28; AL024421; Tex17	Lin28a; Lin-28; AL024421; Tex17
Mus musculus	RefSeq	ILMN_219705	ILMN_219705	LIN28	NM_145833.1	NM_145833.1		83557	22003877	NM_145833.1	Lin28	NP_665832.1	ILMN_1220027	006290445	S	2704	GGCTCATTTACTTCTTTGAGCATCTCTGTAACTCTTGAAGGACCCATGTG	4	-	133559971-133560020	4qD3	Mus musculus lin-28 homolog (C. elegans) (Lin28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lin28a; Lin-28; AL024421; Tex17	Lin28a; Lin-28; AL024421; Tex17
Mus musculus	RefSeq	ILMN_196806	ILMN_219705	LIN28	NM_145833.1	NM_145833.1		83557	22003877	NM_145833.1	Lin28	NP_665832.1	ILMN_2525870	005570563	S	316	ATGGAAGGGTTCCGAAGCCTCAAGGAGGGTGAGGCGGTGGAGTTCACCTT	4	-	133563948-133563997	4qD3	Mus musculus lin-28 homolog (C. elegans) (Lin28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lin28a; Lin-28; AL024421; Tex17	Lin28a; Lin-28; AL024421; Tex17
Mus musculus	RefSeq	ILMN_226309	ILMN_226309	CALCR	NM_007588.2	NM_007588.2		12311	112181178	NM_007588.2	Calcr	NP_031614.2	ILMN_3120532	005720669	A	2054	CTGCCATCAGGAACCACGGAATCCTCCAATCAGCAACAACGAAGGCGAGG	6	-	3637447-3637496	6qA1	Mus musculus calcitonin receptor (Calcr), transcript variant a, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; Any constituent part of a microtubule-based flagellum, a long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 44442] [evidence IDA]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IDA]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]; Any process that modulates the frequency, rate or extent of bone tissue loss (resorption) [goid 45124] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]	Combining with calcitonin to initiate a change in cell activity [goid 4948] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Clr	Clr
Mus musculus	RefSeq	ILMN_226309	ILMN_226309	CALCR	NM_007588.2	NM_007588.2		12311	112181178	NM_007588.2	Calcr	NP_031614.2	ILMN_3045078	000770370	I	1284	TGGACAATGCAGTGGGAACTGTCACCACCCTTACCCCTGAGTGCACACGA	6	-	3657519-3657568	6qA1	Mus musculus calcitonin receptor (Calcr), transcript variant a, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]; Any constituent part of a microtubule-based flagellum, a long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 44442] [evidence IDA]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IDA]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]; Any process that modulates the frequency, rate or extent of bone tissue loss (resorption) [goid 45124] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]	Combining with calcitonin to initiate a change in cell activity [goid 4948] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Clr	Clr
Mus musculus	RefSeq	ILMN_210143	ILMN_210143	PIGH	NM_029988.2	NM_029988.2		110417	76253935	NM_029988.2	Pigh	NP_084264.1	ILMN_1232225	001570458	S	447	GGTCATTTACTACCTCTGCATTTTACTGAAGGAGCCGGGGAAGCCACACG	12	-	80184631-80184680	12qC3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class H (Pigh), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol [goid 17176] [evidence IEA]	A930028P05Rik; MGC102258; 2210416H01Rik	A930028P05Rik; MGC102258; 2210416H01Rik
Mus musculus	RefSeq	ILMN_211566	ILMN_210143	PIGH	NM_029988.2	NM_029988.2		110417	76253935	NM_029988.2	Pigh	NP_084264.1	ILMN_1238592	002370563	S	1538	GGCTCATGTCTGGGAACCAACATTTAATCTCTCACTCTTCACCTAAGCCC	12	-	80182421-80182470	12qC3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class H (Pigh), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol [goid 17176] [evidence IEA]	A930028P05Rik; MGC102258; 2210416H01Rik	A930028P05Rik; MGC102258; 2210416H01Rik
Mus musculus	Riken	ILMN_204825	ILMN_204825	EPHA5	ri|C530046A01|PX00083K15|AK049740|2249					AK049740	Epha5		ILMN_2567897	005890377	S	2146	TGTTTTGCTGTACCGAATGTAAATGCGAAAAAACCTTGTCCTGGCATGCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_222450	ILMN_222450	DPP7	NM_031843.2	NM_031843.2		83768	31981424	NM_031843.2	Dpp7	NP_114031.2	ILMN_2749737	002490682	S	1575	GTGACAACTTGCCTTGTATCTGATGGACTGTCCAGATTTATGGTAGATGG	2	-	25207840-25207889	2qA3	Mus musculus dipeptidylpeptidase 7 (Dpp7), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	Dpp2; DPPII; QPP	Dpp2; DPPII; QPP
Mus musculus	RefSeq	ILMN_246267	ILMN_246267	ABHD14B	NM_029631.2	NM_029631.2		76491	27753959	NM_029631.2	Abhd14b	NP_083907.2	ILMN_3007862	003180730	S	1354	GCATGGATATTCTCAGCCAAGCCCATTTCCTGCCCTGAGGTTTGGGAGTG	9	+	106355149-106355198	9qF1	Mus musculus abhydrolase domain containing 14b (Abhd14b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1810013B01Rik	1810013B01Rik
Mus musculus	RefSeq	ILMN_209336	ILMN_259444	PACSIN1	NM_178365.3	NM_178365.3		23969	146198874	NM_178365.3	Pacsin1	NP_848142.1	ILMN_1244892	005570156	S	1511	AGATGAGCTCACCAAGCTCGGAGAGGAAGACGAACAGGGTTGGTGCCGCG				17qA3.3	Mus musculus protein kinase C and casein kinase substrate in neurons 1 (Pacsin1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]	A830061D09Rik; H74; syndapin; mKIAA1379	A830061D09Rik; H74; syndapin; mKIAA1379
Mus musculus	Riken	ILMN_206170	ILMN_206170	D130064A21RIK	ri|D130064A21|PX00185A16|AK083927|3523					AK083927	D130064A21Rik		ILMN_1232944	006220717	S	3182	TCACAGAAGAGTGGGTGGGAAGAAGGGGAGAGACAGGGAAAGGAGAGGAG										
Mus musculus	RefSeq	ILMN_220717	ILMN_254503	1700016M24RIK	XM_909411.2	XM_909411.2		69439	94399039	XM_909411.2	1700016M24Rik	XP_914504.1	ILMN_1240357	002600348	S	3421	CTACTGGAATGATGCCGTGGAGCTATCTTACTATGTTCAAGACTAGCTGC				15qD3	PREDICTED: Mus musculus RIKEN cDNA 1700016M24 gene (1700016M24Rik), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]				
Mus musculus	RefSeq	ILMN_216515	ILMN_216515	PTPRC	NM_011210.2	NM_011210.2		19264	114326511	NM_011210.2	Ptprc	NP_035340.2	ILMN_1212836	001230541	S	4463	CCTCGTACAGTTAGTTCTGTTATGGAATTCACCATTTATGGGAAATGTAA	1	-	139960133-139960182	1qE4	Mus musculus protein tyrosine phosphatase, receptor type, C (Ptprc), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that modulates the frequency, rate or extent of B cell differentiation [goid 45577] [evidence IMP]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B- or T cell [goid 50857] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the cytokine and chemokine mediated signaling pathway [goid 1960] [evidence IDA]; Any process that stops, prevents, or reduces the rate of T cell mediated cytotoxicity [goid 1915] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50732] [evidence IMP]; Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues [goid 31953] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation [goid 45588] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues [goid 31953] [evidence IMP]; Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell [goid 50855] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell mediated immunity [goid 2711] [evidence IMP]; The attachment of a cell to a cell of a different type via adhesion molecules [goid 34113] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2925] [evidence IMP]; Any process that modulates the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2923] [evidence IMP]	Interacting selectively with a heparan sulfate proteoglycan, any proteoglycan containing heparan sulfate as the glycosaminoglycan carbohydrate unit [goid 43395] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	Ly-5; Lyt-4; T200; Cd45; CD45R; loc; B220	Ly-5; Lyt-4; T200; Cd45; CD45R; loc; B220
Mus musculus	RefSeq	ILMN_216515	ILMN_216515	PTPRC	NM_011210.2	NM_011210.2		19264	114326511	NM_011210.2	Ptprc	NP_035340.2	ILMN_2671984	003870408	S	2636	GAGTGAGCCTGAATCAGATGAGTCTTCAGATGATGACAGTGACTCAGAAG	1	-	139968868-139968917	1qE4	Mus musculus protein tyrosine phosphatase, receptor type, C (Ptprc), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that modulates the frequency, rate or extent of B cell differentiation [goid 45577] [evidence IMP]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B- or T cell [goid 50857] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the cytokine and chemokine mediated signaling pathway [goid 1960] [evidence IDA]; Any process that stops, prevents, or reduces the rate of T cell mediated cytotoxicity [goid 1915] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50732] [evidence IMP]; Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues [goid 31953] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation [goid 45588] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues [goid 31953] [evidence IMP]; Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell [goid 50855] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell mediated immunity [goid 2711] [evidence IMP]; The attachment of a cell to a cell of a different type via adhesion molecules [goid 34113] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2925] [evidence IMP]; Any process that modulates the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2923] [evidence IMP]	Interacting selectively with a heparan sulfate proteoglycan, any proteoglycan containing heparan sulfate as the glycosaminoglycan carbohydrate unit [goid 43395] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	Ly-5; Lyt-4; T200; Cd45; CD45R; loc; B220	Ly-5; Lyt-4; T200; Cd45; CD45R; loc; B220
Mus musculus	Riken	ILMN_205489	ILMN_205489	D030022C03RIK	ri|D030022C03|PX00180M01|AK050817|2093					AK050817	D030022C03Rik		ILMN_2572945	006660372	S	1345	TGTGGACCAATGAGGATTGCAGGTGGATTCCCCCCCTCCCCTTGGAGTGG										
Mus musculus	RefSeq	ILMN_249836	ILMN_249836	OTTMUSG00000000231	NM_001009550.1	NM_001009550.1		381531	57222277	NM_001009550.1	OTTMUSG00000000231	NP_001009550.1	ILMN_2818498	003440110	S	705	GCAGGTTGGTGGTCATGGAGAGGCCCTTCCAAATGCATTATTGTGCCCCC	4	-	61808888-61808937	4qB3	Mus musculus predicted gene, OTTMUSG00000000231 (OTTMUSG00000000231), mRNA.				bM64F17.4; Mup; bM64F17.1	bM64F17.4; Mup; bM64F17.1
Mus musculus	Riken	ILMN_202196	ILMN_202196	1700080P15RIK	ri|1700080P15|ZX00076F11|AK006960|783					AK006960	1700080P15Rik		ILMN_1225282	000050082	S	548	GAACTTCAGCATTACCACTTTCCCTGGCTGGGGTCCTCGAGATGCCTCCG										
Mus musculus	RefSeq	ILMN_246553	ILMN_246553	SNRPG	NM_026506.1	NM_026506.1		68011	13385993	NM_026506.1	Snrpg	NP_080782.1	ILMN_2975640	006350484	S	2	GCTCACTCCTTCGCCGTTGTGCCGAGCCCGCAGAGGAGTCGCCATGAGCA	6	+	86337175-86337216:86337217-86337224	6qD1	Mus musculus small nuclear ribonucleoprotein polypeptide G (Snrpg), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AL022803; SMG; 2810024K17Rik	AL022803; SMG; 2810024K17Rik
Mus musculus	RefSeq	ILMN_209533	ILMN_209533	4933402P03RIK	NM_175368.1	NM_175368.1		108803	30425069	NM_175368.1	4933402P03Rik	NP_780577.1	ILMN_1254829	005290551	S	1340	GCGGAAGTCCAGATTTCTGATCCAACCCCACCTCCAACCACCTTTGTTCC	11	-	69630293-69630342	11qB3	Mus musculus RIKEN cDNA 4933402P03 gene (4933402P03Rik), mRNA.				RP23-422L16.21	RP23-422L16.21
Mus musculus	RefSeq	ILMN_184260	ILMN_258146	GPR85	NM_145066.4	NM_145066.4		64450	41055793	NM_145066.4	Gpr85	NP_659503.1	ILMN_1235042	001260364	S	2771	CACGCCTTGTAAGTTTGGGGGAGCATTCCAAAGCAGTATATTGGTTCCAA	6	-	13785204-13785253	6qA1	Mus musculus G protein-coupled receptor 85 (Gpr85), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5057] [evidence ISA]	2900026B03Rik; DKFZp761L08121	2900026B03Rik; DKFZp761L08121
Mus musculus	RefSeq	ILMN_258146	ILMN_258146	GPR85	NM_145066.4	NM_145066.4		64450	41055793	NM_145066.4	Gpr85	NP_659503.1	ILMN_2854983	003060075	S	2420	GCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCC	6	-	13785555-13785604	6qA1	Mus musculus G protein-coupled receptor 85 (Gpr85), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5057] [evidence ISA]	2900026B03Rik; DKFZp761L08121	2900026B03Rik; DKFZp761L08121
Mus musculus	RefSeq	ILMN_184260	ILMN_258146	GPR85	NM_145066.4	NM_145066.4		64450	41055793	NM_145066.4	Gpr85	NP_659503.1	ILMN_1216302	002600739	S	835	GGATTTCAGGTTTCGTAATGTTGCATGATGCGATCGGTATTTACCCGGGG	6	-	13788065-13788114	6qA1	Mus musculus G protein-coupled receptor 85 (Gpr85), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5057] [evidence ISA]	2900026B03Rik; DKFZp761L08121	2900026B03Rik; DKFZp761L08121
Mus musculus	MEEBO	ILMN_223806	ILMN_223806	F2RL1	scl43662.2_474				31982849	NM_007974	F2rl1		ILMN_2769567	001740653	S	2606	GGAAGATCTGAAACAAGGGGCCATTGCAGGAGTACATGGCTCCAGGCTTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with thrombin to initiate a change in cell activity [goid 15057] [evidence IEA]		
Mus musculus	RefSeq	ILMN_239138	ILMN_239138	ACN9	NM_001077713.1	NM_001077713.1		71238	124248480	NM_001077713.1	Acn9	NP_001071181.1	ILMN_2801568	005900543	S	219	CAGCAGACAAAGCTCAACTGGAAAAGCGTGTTTTGGCACCTCTCTCCCAG	6	+	6988889-6988938	6qA1	Mus musculus ACN9 homolog (S. cerevisiae) (Acn9), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4933430A16Rik; 0610005M07Rik	4933430A16Rik; 0610005M07Rik
Mus musculus	RefSeq	ILMN_217941	ILMN_315777	TMEM219	NM_028389.1	NM_028389.1		68742	134288856	NM_028389.1	Tmem219	NP_082665.1	ILMN_2689569	000510608	S	862	GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAG	7	-	134029762-134029811	7qF3	Mus musculus transmembrane protein 219 (Tmem219), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2900045G02Rik	2900045G02Rik
Mus musculus	Riken	ILMN_206611	ILMN_206611	E130007O11RIK	ri|E130007O11|PX00207C21|AK087403|2397					AK087403	E130007O11Rik		ILMN_1213840	005810753	S	625	GACTGTGTGCTGCCCATTGACAACCAACTCTGCGAGGTTTGAGGGCTCCC										
Mus musculus	RefSeq	ILMN_215646	ILMN_215646	ABCA1	NM_013454.3	NM_013454.3		11303	90568037	NM_013454.3	Abca1	NP_038482.3	ILMN_1226851	003940349	S	10206	AAGCTTGTTTCTATGTTATGAGTCACAAAATAAAGCTGTGACAGTCCTGC	4	-	53043665-53043714	4qB2	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 1 (Abca1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IMP]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IMP]; The regulated release of a peptide from a cell or group of cells [goid 2790] [evidence IMP]; The covalent or non-covalent attachment of lipid moieties to an amino acid in a protein [goid 6497] [evidence IMP]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [evidence IDA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42158] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IDA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IMP]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IDA]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [evidence IDA]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [evidence IMP]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IDA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IMP]	Abc1	Abc1
Mus musculus	RefSeq	ILMN_214937	ILMN_214937	CDH8	NM_007667.2	NM_007667.2		12564	85662399	NM_007667.2	Cdh8	NP_031693.2	ILMN_1224574	000540047	S	2919	CCGCTTTAAGAGACTGGGCGAACTCTACTCTGTTGGTGAAAGTGACAAAG	8	-	101554472-101554521	8qD1	Mus musculus cadherin 8 (Cdh8), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI851472; cad8	AI851472; cad8
Mus musculus	RefSeq	ILMN_251054	ILMN_251054	PCDH9	NM_001081377.1	NM_001081377.1		211712	124487028	NM_001081377.1	Pcdh9	NP_001074846.1	ILMN_3028837	003610093	I	2	TGGACCTGAGGGATTTTTACCTGTTGGCTGCTCTGATTGCCTGTTTAAGG	14	-	94287900-94287949	14qE2.1	Mus musculus protocadherin 9 (Pcdh9), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	A730003J17Rik; Gm1213; AU021802; 1500001L12Rik; C530050I23Rik; C630029H24Rik; Gm297	A730003J17Rik; Gm1213; AU021802; 1500001L12Rik; C530050I23Rik; C630029H24Rik; Gm297
Mus musculus	RefSeq	ILMN_206135	ILMN_251054	PCDH9	NM_001081377.1	NM_001081377.1		211712	124487028	NM_001081377.1	Pcdh9	NP_001074846.1	ILMN_1243310	007330626	S	3809	TGCCCCTTATCGTAGGGAATACTCATAACTTTGTGTTAGCACGATGGAGG	14	-	93414586-93414635	14qE2.1	Mus musculus protocadherin 9 (Pcdh9), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	A730003J17Rik; Gm1213; AU021802; 1500001L12Rik; C530050I23Rik; C630029H24Rik; Gm297	A730003J17Rik; Gm1213; AU021802; 1500001L12Rik; C530050I23Rik; C630029H24Rik; Gm297
Mus musculus	RefSeq	ILMN_199732	ILMN_251054	PCDH9	NM_001081377.1	NM_001081377.1		211712	124487028	NM_001081377.1	Pcdh9	NP_001074846.1	ILMN_1248508	007320309	S	3522	GAATGGGCACACCCTGACAAGAGCGTGGAAAGAAGACACCAACAGGAACC	14	-	93414873-93414922	14qE2.1	Mus musculus protocadherin 9 (Pcdh9), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	A730003J17Rik; Gm1213; AU021802; 1500001L12Rik; C530050I23Rik; C630029H24Rik; Gm297	A730003J17Rik; Gm1213; AU021802; 1500001L12Rik; C530050I23Rik; C630029H24Rik; Gm297
Mus musculus	RefSeq	ILMN_194749	ILMN_251054	PCDH9	NM_001081377.1	NM_001081377.1		211712	124487028	NM_001081377.1	Pcdh9	NP_001074846.1	ILMN_1231837	002470021	S	5012	GCCTGGCAGGTACCAGCATTTTGTCACTTGGGTCAAACCAAGGGAGTGAC	14	-	93413383-93413432	14qE2.1	Mus musculus protocadherin 9 (Pcdh9), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	A730003J17Rik; Gm1213; AU021802; 1500001L12Rik; C530050I23Rik; C630029H24Rik; Gm297	A730003J17Rik; Gm1213; AU021802; 1500001L12Rik; C530050I23Rik; C630029H24Rik; Gm297
Mus musculus	Riken	ILMN_203739	ILMN_203739	9830147N24RIK	ri|9830147N24|PX00118N02|AK036668|3296					AK036668	9830147N24Rik		ILMN_1242895	007510576	S	2050	GGCAGCACTCGCCTCTACCCTTGAGCCACTTTGCTGACTTTTACCTCTCC										
Mus musculus	Riken	ILMN_205016	ILMN_205016	BIRC6	ri|A230055P13|PX00128B06|AK038699|2712					AK038699	Birc6		ILMN_1249233	000130026	S	2467	AGTAGGCTCTTATCAGACCAGAGGCCATGTTACACCAACCAGAGCACTGC						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IC ]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199633	ILMN_199633	LOC382812	XM_356690.1	XM_356690.1			38075402	XM_356690.1	LOC382812		ILMN_2535926	007400097	S	38	TAAAGTGGAAACATGGCAGTTCCTCCACAGAAGAAAACAAGACATCTGCC										
Mus musculus	Riken	ILMN_204699	ILMN_204699	BC003993	ri|A430034H03|PX00135K06|AK039942|1066					AK039942	BC003993		ILMN_1216069	001660717	S	857	GCTGTTAGGTAGCTATCACCTGCATGTCCAGTCACAATTCTTGGTAATGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215944	ILMN_215944	OLFR854	NM_146522.1	NM_146522.1		258515	33239275	NM_146522.1	Olfr854	NP_666733.1	ILMN_2665527	001580068	S	603	GATTTATATTTCATCATGCATATTTGCTGGAATTCCTCTCTCCGGAATTG	9	-	19371174-19371223	9qA2	Mus musculus olfactory receptor 854 (Olfr854), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR147-3	MOR147-3
Mus musculus	MEEBO	ILMN_195447	ILMN_195447	1110033O09RIK	scl31128.1.1_88				21312091	NM_026812	1110033O09Rik		ILMN_1248948	000540653	S	19	GCTTTGGTACAAGGCCGTGAGTTGCGATGGCATGATCTGACAACTTCTCC										
Mus musculus	RefSeq	ILMN_191675	ILMN_241133	RIMS4	NM_183023.1	NM_183023.1		241770	33942096	NM_183023.1	Rims4	NP_898844.1	ILMN_1231036	002750653	S	718	TCCATGGTGGACCCAGCCACAGGTCCGCTGCTTCGGCAGGCATCCCAGCT	2	-	163689681-163689730	2qH3	Mus musculus regulating synaptic membrane exocytosis 4 (Rims4), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]		6530406L02; Rim4	6530406L02; Rim4
Mus musculus	MEEBO	ILMN_187141	ILMN_187141	A530025K05RIK	scl00320142.1_305						A530025K05Rik		ILMN_1227339	002680504	S	5	CCTAAGTATTAATATGGCCTTGATTCACTAAGCTGTGTCTCCCTTTGTAC										
Mus musculus	RefSeq	ILMN_212468	ILMN_212468	TBX20	NM_020496.2	NM_020496.2		57246	34878731	NM_020496.2	Tbx20	NP_065242.1	ILMN_2626805	001050025	S	1456	CCTCTTTTTCTCCTGGATATACCCTTGCTGATAAAACATGATACTGCCAC	9	-	24544986-24545035	9qA4	Mus musculus T-box 20 (Tbx20), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence IMP]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IGI]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	AL022859; 9430010M06Rik; Tbx12	AL022859; 9430010M06Rik; Tbx12
Mus musculus	RefSeq	ILMN_214202	ILMN_214202	1110001A07RIK	NM_025377.1	NM_025377.1		66140	13384751	NM_025377.1	1110001A07Rik	NP_079653.1	ILMN_2789047	000990301	S	991	ACCCAGTGTGCAGAAGCACGTCTGGTTTGTGTAGTACCAGCTAGCACGGC	11	+	86938811-86938860	11qC	Mus musculus RIKEN cDNA 1110001A07 gene (1110001A07Rik), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		C78640; MGC151378	C78640; MGC151378
Mus musculus	MEEBO	ILMN_189935	ILMN_189935	V1RA3	scl0113845.1_239				16716522	NM_053218	V1ra3		ILMN_1224684	001660524	S	2	GTCCATCTTCGACAGCATTGTCTCCTCCTCAAGAGCTATGTTCCTGGATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200334	ILMN_200334	LOC386254	XM_359141.1	XM_359141.1			38081338	XM_359141.1	LOC386254		ILMN_1232953	001740224	S	335	AAGGGGAAGTGGACACAATAAAGAAAACCCAAAGCGAGGCAACGCTGGAG										
Mus musculus	RefSeq	ILMN_209408	ILMN_209408	LIG1	NM_010715.1	NM_010715.1		16881	6754543	NM_010715.1	Lig1	NP_034845.1	ILMN_1213101	001770037	S	334	CCCACAAAAGAAGGTAAAGCGAAGAAGCCAGAGAAGGAGACACCCAGCAG	7	+	12182644-12182693	7qA1	Mus musculus ligase I, DNA, ATP-dependent (Lig1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m) [goid 3910] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	LigI; AL033288; mLigI	LigI; AL033288; mLigI
Mus musculus	RefSeq	ILMN_223428	ILMN_223428	SENP1	NM_144851.3	NM_144851.3		223870	142353113	NM_144851.3	Senp1	NP_659100.1	ILMN_1248184	006250446	S	2542	CATCCCATCCTAAGCACACTACACAAGCCCTGGCAGACCCTAAAGTCTCG	15	-	97872724-97872773	15qF1	Mus musculus SUMO1/sentrin specific peptidase 1 (Senp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein [goid 16926] [evidence IMP]; The process by which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein [goid 16926] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	E330036L07Rik; D15Ertd528e; 2310046A20Rik; MGC27975	E330036L07Rik; D15Ertd528e; 2310046A20Rik; MGC27975
Mus musculus	MEEBO	ILMN_218139	ILMN_218139	A830019P07RIK	scl52530.5_277	NM_183214.1			34147289	NM_183214.1	A830019P07Rik		ILMN_1259824	003520692	S	1258	GGGCAATCAGCTTTACCATAAAGGCTACTAGATGATGCTCTGTACTATTG										
Mus musculus	RefSeq	ILMN_200567	ILMN_316094	LOC100040202	XM_001474258.1	XM_001474258.1		100040202	149269650	XM_001474258.1	LOC100040202	XP_001474308.1	ILMN_1225715	000160349	S	290	CGTTGTCGAAGGACAATGCCAAATCATTGAGACCACCTACACCTCGGCCC	18	-	16299154-16299203	18qA1	PREDICTED: Mus musculus similar to gamma-aminobutyric acid  A receptor, epsilon (LOC100040202), mRNA.					
Mus musculus	Riken	ILMN_204771	ILMN_204771	B930066N23RIK	ri|B930066N23|PX00164P16|AK047459|2422					AK047459	B930066N23Rik		ILMN_1243473	005820278	S	338	TCCATCGGTGGGAAGCACACTGGCTTGGGGATCGCGTACTTGTCTCAGAC										
Mus musculus	MEEBO	ILMN_214785	ILMN_214785	1700129C05RIK	scl45479.6.1_4	NM_026461.1			13385955	NM_026461.1	1700129C05Rik		ILMN_1219593	003060020	S	761	GCTAAAATATGATATCTGGGAAAGATGGTCATCAGAAGCAGCATTCATCC										
Mus musculus	RefSeq	ILMN_184855	ILMN_257671	C030003D03RIK	NM_029881.2	NM_029881.2		77220	141803464	NM_029881.2	C030003D03Rik	NP_084157.1	ILMN_2736212	000020224	S	2963	CGCTTGATAAACTGCCTTGTGATTTACCCTGTGCTGGAAAGCCTTCCACT	10	-	25711692-25711741	10qA4	Mus musculus RIKEN cDNA C030003D03 gene (C030003D03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_230154	ILMN_230154	ABCD3	NM_008991.2	NM_008991.2		19299	60218876	NM_008991.2	Abcd3	NP_033017.2	ILMN_2925281	007560253	S	3084	GGAACGGTCTCTGACTCCTGGACAACTACTCCTGTATCGGCTCTGGCTCC	3	-	121462093-121462142	3qG1	Mus musculus ATP-binding cassette, sub-family D (ALD), member 3 (Abcd3), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU018866; Pxmp1; AI313901; PMP68; AW146054; PMP70	AU018866; Pxmp1; AI313901; PMP68; AW146054; PMP70
Mus musculus	RefSeq	ILMN_187817	ILMN_230154	ABCD3	NM_008991.2	NM_008991.2		19299	60218876	NM_008991.2	Abcd3	NP_033017.2	ILMN_2447373	006510441	S	3326	CAGTTTTACCATGTCTCCTTAGCAAACTTGTGTACTTATTTTCTGTTCAG	3	-	121461851-121461900	3qG1	Mus musculus ATP-binding cassette, sub-family D (ALD), member 3 (Abcd3), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU018866; Pxmp1; AI313901; PMP68; AW146054; PMP70	AU018866; Pxmp1; AI313901; PMP68; AW146054; PMP70
Mus musculus	RefSeq	ILMN_254946	ILMN_254946	DEFB18	NM_001039123.1	NM_001039123.1		654460	84993771	NM_001039123.1	Defb18	NP_001034212.1	ILMN_3162156	002370022	S	174	CTACTGTCACACTGAGCCCTGCTGTGTGGTGCGAGAATACAAAAGAATGG	1	-	18226588-18226637	1qA3	Mus musculus defensin beta 18 (Defb18), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		Defb18	Defb18
Mus musculus	MEEBO	ILMN_187274	ILMN_187274	9845300_1171	9845300_1171						9845300_1171		ILMN_2442686	006980553	S	16	GCGGGTCGCGCAGTCCGTCCTCCGACGGGGACGAGGAGGACGAAGAGGAG										
Mus musculus	MEEBO	ILMN_209686	ILMN_209686	STK25	scl000828.1_34	NM_021537.2			31981192	NM_021537.2	Stk25		ILMN_1223819	004220722	S	1135	CCTCCAACCATCCGGCCAAGTCCACATAGCAAGCTGCACAAGGGAACTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208777	ILMN_208777	NPDC1	NM_008721.3	NM_008721.3		18146	118130668	NM_008721.3	Npdc1	NP_032747.2	ILMN_2589403	002350674	S	1016	CCTCCGATGAGGAAAATGAAGATGGCGACTTCACTGTGTATGAATGCCCA	2	+	25264460-25264509	2qA3	Mus musculus neural proliferation, differentiation and control gene 1 (Npdc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			NPDC-1; AI314472	NPDC-1; AI314472
Mus musculus	RefSeq	ILMN_221928	ILMN_221928	MRPL30	NM_027098.2	NM_027098.2		107734	142384716	NM_027098.2	Mrpl30	NP_081374.1	ILMN_1260262	000580161	S	308	GGTGGGGACCCCCAGAACCCTCACAAACTGCACATTGTCACAAGAATAAG	1	+	37954569-37954618	1qB	Mus musculus mitochondrial ribosomal protein L30 (Mrpl30), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	2310001L22Rik; Rpml28; MRP-L28	2310001L22Rik; Rpml28; MRP-L28
Mus musculus	Riken	ILMN_207420	ILMN_207420	F630047D10RIK	ri|F630047D10|PL00015O13|AK089227|1883					AK089227	F630047D10Rik		ILMN_1215081	004760286	S	1670	GCTGCTGTTGCACAACCTGGTGTTTCCCGAAGCTTTGTGGTGGGGAAGCC										
Mus musculus	MEEBO	ILMN_189447	ILMN_189447	SCL000859.1_341	scl000859.1_341	BC033416.1			23273167	BC033416.1	scl000859.1_341		ILMN_2461340	004610563	S	6	GGCATCTGTTGCGGCTCCGTTGAGTGGCAAGGCATGCTTAGACCTGAAAC										
Mus musculus	Riken	ILMN_201608	ILMN_201608	GUS-S	ri|0610039G03|R000004J13|AK002832|924					AK002832	Gus-s		ILMN_1256735	003990475	S	608	CCGGCGGGAGGCTCTGTGCTAGGCTGGGTCCATTTTTATCTCAATTCCCA										
Mus musculus	RefSeq	ILMN_189324	ILMN_253316	PIRA2	NM_011089.2	NM_011089.2		18725	133892524	NM_011089.2	Pira2	NP_035219.2	ILMN_1229041	005260463	S	1905	GGTCTCCCAAAAGGCCCATCCCACCAATTCCCACAGAGAACAAGGATCAC	7	-	3789921-3789941:3792236-3792264	7qA1	Mus musculus paired-Ig-like receptor A2 (Pira2), mRNA.				6M23	6M23
Mus musculus	RefSeq	ILMN_218998	ILMN_218998	PRKAG3	NM_153745.2	NM_153745.2		241113	118130072	NM_153745.2	Prkag3	NP_714967.1	ILMN_3092923	005550189	A	516	ATCCCCACAGGCCCCACTTCTCGGCCTGAGTTGGGATGACGAACTTCAGA	1	-	74793826-74793875	1qC3	Mus musculus protein kinase, AMP-activated, gamma 3 non-catatlytic subunit (Prkag3), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IMP]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AMKg3S; AMPKg3S; AMPKg3; AMPKg3L; AMKg3L	AMKg3S; AMPKg3S; AMPKg3; AMPKg3L; AMKg3L
Mus musculus	Riken	ILMN_203963	ILMN_203963	MAN2B2	ri|A530030A19|PX00140C14|AK079969|1667					AK079969	Man2b2		ILMN_1213661	000450639	S	1483	CTTACCCCACCCCTCCAAGAATGCTCTACCAAGGGGAAGCAACCCTGCCT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216235	ILMN_216235	USE1	NM_029768.3	NM_029768.3		67023	119360275	NM_029768.3	Use1	NP_084044.1	ILMN_2668778	003710653	S	440	CCTTGGGAAAGGGCCACATGGATGTCTTTACCTATCACTACTGGGGACCT	8	+	73892962-73893011	8qB3.3	Mus musculus unconventional SNARE in the ER 1 homolog (S. cerevisiae) (Use1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IMP]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mED2; Q-SNARE; Ed2; AV002165; 5730403H22Rik; D12	mED2; Q-SNARE; Ed2; AV002165; 5730403H22Rik; D12
Mus musculus	MEEBO	ILMN_222309	ILMN_222309	5031425E22RIK	scl075977.2_107	XM_149592.1			20822999	XM_149592.1	5031425E22Rik		ILMN_2747802	004730414	S	1205	AGAGCCATCTCTAGCCTCTCTGACTTGGTTGTCTGTGTCTGCAGGACCTC										
Mus musculus	MEEBO	ILMN_210883	ILMN_210883	NEO1	scl0018007.1_62	NM_008684.1			6679035	NM_008684.1	Neo1		ILMN_2610156	001090288	S	5082	GCCAAGGGAGTCTGTGATGTTCTCTCAAGCAGTTGACACTTGACTGTGGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IPI]		
Mus musculus	RefSeq	ILMN_215126	ILMN_215126	OLFR398	NM_146710.1	NM_146710.1		258705	22129414	NM_146710.1	Olfr398	NP_666921.1	ILMN_2655832	004730343	S	638	TCGTGTCCCTTTCCTATGCACGCATCCTTGTGGCAGTGCTTGGAATTCGG	11	-	73797421-73797470	11qB4	Mus musculus olfactory receptor 398 (Olfr398), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR157-1; RP23-360H16.8	MOR157-1; RP23-360H16.8
Mus musculus	RefSeq	ILMN_197401	ILMN_197401	LOC268717	XM_195827.2	XM_195827.2			38075584	XM_195827.2	LOC268717		ILMN_1231033	004050471	S	961	ACTGACCTTGGCAGTACAGTGACGATCTCTGCAGGCACAGGCACCTACGT										
Mus musculus	MEEBO	ILMN_220668	ILMN_220668	A930006J02RIK	scl46383.2.1_270	NM_183125.1			34147132	NM_183125.1	A930006J02Rik		ILMN_2725054	002470678	S	811	CTTACTTCCAGTCTATCCCGTCTCTCCTTTAATAGATAGCCATTAAAATA										
Mus musculus	RefSeq	ILMN_200602	ILMN_200602	LOC381770	XM_355767.1	XM_355767.1			38084191	XM_355767.1	LOC381770		ILMN_2539337	001580541	S	151	CAGAGATGGCTCCCCAGAGTGAGCCCAGGGATGGGTTCAGTAATGCCCAG										
Mus musculus	Riken	ILMN_201971	ILMN_201971	1500010C09RIK	ri|1500010C09|R000020G16|AK005186|680					AK005186	1500010C09Rik		ILMN_2546025	003830242	S	607	GGGAGTAGAGGAAGCTTTCCGGGCCTGAGTGTTCATCCATCAGTAGGACA										
Mus musculus	RefSeq	ILMN_199508	ILMN_199508	LOC383601	XM_357147.1	XM_357147.1			38073707	XM_357147.1	LOC383601		ILMN_1235397	002360133	S	462	GCAGTGTGCCGACTTTCCTGAGGTGAATAAGCAGTGTGCAGGCTTTCCTG										
Mus musculus	MEEBO	ILMN_216638	ILMN_216638	2600014M03RIK	scl0069900.1_163	NM_178620.2			31340865	NM_178620.2	2600014M03Rik		ILMN_1216901	001990348	S	2772	GCCTACAGAACTCAGAGAAGTCAGATGGAGATTGGATCCCTGCGAACTGC										
Mus musculus	MEEBO	ILMN_210205	ILMN_210205	C130021I20	scl21042.3_694	NM_177842.2			31342873	NM_177842.2	C130021I20		ILMN_2603249	005340195	S	3595	GCGGCTCAGCCGAATTGGAGGTTGGCCCCTTCCTGTAATTATTTGGTGTC										
Mus musculus	RefSeq	ILMN_190186	ILMN_249104	ZFP239	NM_001001792.1	NM_001001792.1		22685	49087127	NM_001001792.1	Zfp239	NP_001001792.1	ILMN_2467917	004290048	S	114	CTGCTCTGATGCTGGCATTTCATGCCACTGCAGAACTGTGATGACTAAGG	6	+	117816460-117816509	6qF1	Mus musculus zinc finger protein 239 (Zfp239), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Mok-2; Mok2	Mok-2; Mok2
Mus musculus	RefSeq	ILMN_219993	ILMN_219993	HIST1H2BH	NM_178197.1	NM_178197.1		319182	30061386	NM_178197.1	Hist1h2bh	NP_835504.1	ILMN_2716195	005420451	S	16	AAGTCCGCTCCTGCCCCGAAGAAGGGCTCCAAGAAGGCCCTGACCAAGGC	13	-	23635156-23635205	13qA3.1	Mus musculus histone cluster 1, H2bh (Hist1h2bh), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2b-221; MGC106612	H2b-221; MGC106612
Mus musculus	RefSeq	ILMN_215263	ILMN_215263	BARX1	NM_007526.1	NM_007526.1		12022	6671613	NM_007526.1	Barx1	NP_031552.1	ILMN_2831618	004880603	S	713	AGGAAGGACACAGGCCCGGAAGCCAATCCCAGGTGTCAGCGAGCTTCTGT	13	+	48678055-48678104	13qA5	Mus musculus BarH-like homeobox 1 (Barx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IGI]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	Riken	ILMN_205404	ILMN_205404	E130013D14RIK	ri|E130013D14|PX00207F24|AK053385|2404					AK053385	E130013D14Rik		ILMN_1220343	003180364	S	2205	GGCTGCAGGGAGACCTGTGCTGTATCACTTTGACCAGAAGGAAGAAAGCC										
Mus musculus	RefSeq	ILMN_212854	ILMN_212854	MYBL2	NM_008652.2	NM_008652.2		17865	31543275	NM_008652.2	Mybl2	NP_032678.1	ILMN_1249829	003310546	S	3091	GGCCCATAGCTGGTGATCAGTCTCAAACTTGAAAAGGGAGATGCTGAGCC	2	+	162909812-162909861	2qH2	Mus musculus myeloblastosis oncogene-like 2 (Mybl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Bmyb	Bmyb
Mus musculus	RefSeq	ILMN_212854	ILMN_212854	MYBL2	NM_008652.2	NM_008652.2		17865	31543275	NM_008652.2	Mybl2	NP_032678.1	ILMN_2637886	003840121	S	1159	GTGCGACCTGAGTAAATTTGACCTTCCTGAAGAACCCTCTACGGAGGGCA	2	+	162900131-162900180	2qH2	Mus musculus myeloblastosis oncogene-like 2 (Mybl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Bmyb	Bmyb
Mus musculus	RefSeq	ILMN_212854	ILMN_212854	MYBL2	NM_008652.2	NM_008652.2		17865	31543275	NM_008652.2	Mybl2	NP_032678.1	ILMN_2826881	003060477	S	3628	CCTGGAATTTCCTCGCAGACACACCCAAATGTGTCTTCTGGTCAGCCAAG	2	+	162910349-162910398	2qH2	Mus musculus myeloblastosis oncogene-like 2 (Mybl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Bmyb	Bmyb
Mus musculus	Riken	ILMN_203264	ILMN_203264	DYSF	ri|9430011E24|PX00107B18|AK034587|1991					AK034587	Dysf		ILMN_2555964	006590521	S	1803	GGCTACCTGTCCCCTGCGGCTTTTCCATAGTTAGTAGTTCTGAGGTTGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]	The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199111	ILMN_199111	LOC216443	XM_125952.4	XM_125952.4			38090996	XM_125952.4	LOC216443		ILMN_2534090	005420367	S	2744	GGCAACGTCGTCCGGGAACTGAAAGCACAGAAGGCAGACAAGAACCAGGT										
Mus musculus	RefSeq	ILMN_197714	ILMN_234998	LOC268812	XR_003769.1	XR_003769.1		268812	94399645	XR_003769.1	LOC268812		ILMN_1251267	007100097	S	416	CACAAGAATCGGGAGCTGTGAGTGCACTACCTTGGGGTCTCTCTGCCCAT				15qD1	PREDICTED: Mus musculus similar to PQ loop repeat containing 3 (LOC268812), mRNA.					
Mus musculus	RefSeq	ILMN_199383	ILMN_199383	OLFR338	NM_146947.1	NM_146947.1		258949	22129020	NM_146947.1	Olfr338	NP_667158.1	ILMN_1219360	001240209	S	635	TTCTTGTCTCTTATGGCCGCATTGGAGTAACCATTATGAAAGCTCCCTCC	2	+	36232932-36232981	2qB	Mus musculus olfactory receptor 338 (Olfr338), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR136-5	MOR136-5
Mus musculus	RefSeq	ILMN_199383	ILMN_199383	OLFR338	NM_146947.1	NM_146947.1		258949	22129020	NM_146947.1	Olfr338	NP_667158.1	ILMN_2535056	006590112	S	537	CTCTACCTTGCTGAAGCTGTCCAGCTCAGACACCACCATCAATCAACTGG	2	+	36232834-36232883	2qB	Mus musculus olfactory receptor 338 (Olfr338), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR136-5	MOR136-5
Mus musculus	RefSeq	ILMN_218078	ILMN_218078	FAM135A	NM_026604.3	NM_026604.3		68187	47271529	NM_026604.3	Fam135a	NP_080880.3	ILMN_2691243	005390451	S	5144	GTTTTAAAGGTTTTCTATAAAATCATATTGTTGCTGTTAAATGTGTCATG	1	-	24018552-24018601	1qA5	Mus musculus family with sequence similarity 135, member A (Fam135a), mRNA.				AI835491; KIAA1411	AI835491; KIAA1411
Mus musculus	RefSeq	ILMN_218078	ILMN_218078	FAM135A	NM_026604.3	NM_026604.3		68187	47271529	NM_026604.3	Fam135a	NP_080880.3	ILMN_2790188	001850646	S	4871	CCTTGTGCCCATGTGTATGTCTGATCTTTTATTATTGGCTTCCACGATCC	1	-	24018825-24018874	1qA5	Mus musculus family with sequence similarity 135, member A (Fam135a), mRNA.				AI835491; KIAA1411	AI835491; KIAA1411
Mus musculus	RefSeq	ILMN_185720	ILMN_234554	CCDC92	NM_144819.2	NM_144819.2		215707	110625892	NM_144819.2	Ccdc92	NP_659068.1	ILMN_2429437	004280431	S	2069	GCACTTGCCTTAAAACTCGCTCTGGCGTGTGCTCTATCCAGAGTTCTCTA	5	-	125314939-125314988	5qF	Mus musculus coiled-coil domain containing 92 (Ccdc92), mRNA.				MGC38387; D5Bwg0834e; AW050178	MGC38387; D5Bwg0834e; AW050178
Mus musculus	RefSeq	ILMN_185720	ILMN_234554	CCDC92	NM_144819.2	NM_144819.2		215707	110625892	NM_144819.2	Ccdc92	NP_659068.1	ILMN_2598374	000670446	S	1583	GGCTCCTGATCTTAGCAAGATGACCTCAACCCTGATGTTGCCCCAACCTG	5	-	125315425-125315474	5qF	Mus musculus coiled-coil domain containing 92 (Ccdc92), mRNA.				MGC38387; D5Bwg0834e; AW050178	MGC38387; D5Bwg0834e; AW050178
Mus musculus	RefSeq	ILMN_216938	ILMN_216938	PLVAP	NM_032398.1	NM_032398.1		84094	14161697	NM_032398.1	Plvap	NP_115774.1	ILMN_2984110	003290239	S	1763	CCTCCCCTGAAGGGTTCTAGCCACCACGCCCACAGGATTCCCATTAGGTT	8	-	74021817-74021866	8qB3.3	Mus musculus plasmalemma vesicle associated protein (Plvap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			PV-1; MECA32	PV-1; MECA32
Mus musculus	MEEBO	ILMN_224297	ILMN_224297	SOX9	scl40760.4_18				31543760	NM_011448	Sox9		ILMN_2778151	004390037	S	4007	GTGTCTTGTTTGTTTCCCTCTCCAAATTCTTCCTTCTTTGTGCACCCTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The determination of sex and sexual phenotype in a male organism's germ line [goid 19100] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The specification of male sex of an individual organism [goid 30238] [evidence IGI]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222339	ILMN_222339	1110004F10RIK	NM_019772.2	NM_019772.2		56372	118130596	NM_019772.2	1110004F10Rik	NP_062746.1	ILMN_1242099	005810010	S	1342	GTGACCAAAGTTCATTTTTTCCTCCTAAGGTCTAAATAAAGAGAAAGCAG	7	+	123248666-123248715	7qF1	Mus musculus RIKEN cDNA 1110004F10 gene (1110004F10Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	sid2057; Smap; Smacp; sid2057p	sid2057; Smap; Smacp; sid2057p
Mus musculus	RefSeq	ILMN_214425	ILMN_311302	LOC100040736	XM_001475162.1	XM_001475162.1		100040736	149252861	XM_001475162.1	LOC100040736	XP_001475212.1	ILMN_2647898	004560044	S	623	CAATGGATGGAGGAAGAGAAGGCTTCGTAGGAACCAGAACAGCTGTCAGC	4	+	114588805-114588854	4qD1	PREDICTED: Mus musculus hypothetical protein LOC100040736 (LOC100040736), mRNA.					
Mus musculus	MEEBO	ILMN_191771	ILMN_191771	DNM3	scl17297.1.1_274				27369921	NM_172646	Dnm3		ILMN_2482131	005960167	S	16	ACTATATGTCATGTGTACATAAGAGCTTTTATTTTTGACCTGTGTCTTTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218483	ILMN_218483	LRRC50	NM_026648.1	NM_026648.1		68270	13386135	NM_026648.1	Lrrc50	NP_080924.1	ILMN_2845744	004540072	S	2553	ACTGAGGTGCAGGGGGTGGCTCTACCCTGGAGACGTAGCCAGATCCCCAA	8	+	122484163-122484212	8qE1	Mus musculus leucine rich repeat containing 50 (Lrrc50), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4930457P18Rik	4930457P18Rik
Mus musculus	RefSeq	ILMN_236302	ILMN_236302	KCNQ2	NM_010611.2	NM_010611.2		16536	54873638	NM_010611.2	Kcnq2	NP_034741.2	ILMN_3162639	002680398	I	2468	CTGCGGGATAGCGACACGTCCATCTCCATCCCTTCGGTGGACCATGAGGA	2	-	180815986-180816035	2qH4	Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	HNSPC; KQT2	HNSPC; KQT2
Mus musculus	RefSeq	ILMN_217721	ILMN_217721	MAGEB2	NM_031171.1	NM_031171.1		17146	13624318	NM_031171.1	Mageb2	NP_112448.1	ILMN_1246723	007040019	S	336	CCTGCTAGATAAGTTTAAGATGAAAGAAGCAGTTACAAGGAGTGAAATGC	X	+	88577579-88577628	XqC1	Mus musculus melanoma antigen, family B, 2 (Mageb2), mRNA.				Smage2; Mage-rs2; Mage-b2	Smage2; Mage-rs2; Mage-b2
Mus musculus	Riken	ILMN_202712	ILMN_202712	0610040O15RIK	ri|0610040O15|R000004D20|AK018753|84					AK018753	0610040O15Rik		ILMN_1240829	000940634	S	1	GTAGAATACGCAGCCGGCCCATTCGCGTTATTCTTTATAGCAGAGTACAC										
Mus musculus	RefSeq	ILMN_200277	ILMN_331714	LOC433955	XR_033167.1	XR_033167.1		433955	149254642	XR_033167.1	LOC433955		ILMN_1230916	001710128	S	935	AAGTGGCTCCTCCTGAGTACCATCGGAAAGCCGTGTGAGGGGTGTGCTCG	5	+	138946974-138947023	5qG2	PREDICTED: Mus musculus similar to HSPC008 (LOC433955), misc RNA.					
Mus musculus	RefSeq	ILMN_186319	ILMN_186319	TYMS	NM_021288.2	NM_021288.2		22171	46391090	NM_021288.2	Tyms	NP_067263.1	ILMN_2441899	001400484	S	15	ACTCAAGGAGGAGCCCTCACAGTCACTTAAGCACCCCACACAGCACATCA	5	-	30404304-30404334:30404335-30404353	5qB1	Mus musculus thymidylate synthase (Tyms), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate) [goid 6231] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = dihydrofolate + dTMP [goid 4799] [evidence IEA]	TS	TS
Mus musculus	RefSeq	ILMN_217467	ILMN_217467	OLFR308	NM_146621.1	NM_146621.1		258614	33239365	NM_146621.1	Olfr308	NP_666832.1	ILMN_2800549	005290463	S	474	GCCAGCAGCACTCATCAGCACCTTGTCCTTCTGTGGCACCCATGCTATCA	7	-	93469937-93469986	7qD3	Mus musculus olfactory receptor 308 (Olfr308), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR104-1	MOR104-1
Mus musculus	RefSeq	ILMN_196667	ILMN_233576	B430212C06RIK	XM_914982.3	XM_914982.3		338360	149270107	XM_914982.3	B430212C06Rik	XP_920075.3	ILMN_1237188	004220465	S	465	TCTTTGCTGAGACAAGCCATGCTCCTTCCTGCTGATGATCCAGTCACCGG				18qE1	PREDICTED: Mus musculus RIKEN cDNA B430212C06 gene, transcript variant 1 (B430212C06Rik), mRNA.					
Mus musculus	MEEBO	ILMN_223404	ILMN_223404	NPM1	scl0001264.1_3				6679107	NM_008722	Npm1		ILMN_2763651	007200639	S	669	ACCCCAGCCAAAAATGCACAAAAATCAAACCAAAATGGAAAAGACTTAAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; Any process that modulates the frequency, rate or extent of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 43516] [evidence IGI]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IDA]		
Mus musculus	RefSeq	ILMN_198090	ILMN_238717	LOC639943	XM_916585.3	XM_916585.3		639943	149274286	XM_916585.3	LOC639943	XP_921678.3	ILMN_1253416	002940215	S	1095	TCACCATGGGATGGTGTTCTTTCCATGGCAGCTTAACACTTTCCTGAAGA					PREDICTED: Mus musculus similar to putative pheromone receptor (LOC639943), mRNA.					
Mus musculus	RefSeq	ILMN_216922	ILMN_216922	PELO	NM_134058.1	NM_134058.1		105083	19527273	NM_134058.1	Pelo	NP_598819.1	ILMN_2853658	004850541	S	1478	CGTCCCTGGTTTTCTCAGCATCCTTGGCAGGGCCAGAGCAGCACTTGTTG	13	-	116209337-116209386	13qD2.2	Mus musculus pelota homolog (Drosophila) (Pelo), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA409897; AI852218	AA409897; AI852218
Mus musculus	Riken	ILMN_206471	ILMN_206471	PTBP2	ri|D430001F15|PX00193D15|AK084846|4052					AK084846	Ptbp2		ILMN_1259651	006270577	S	3660	CTGGTGACCCTTTATTAGCATTTGCTGTCTCCAGCACCATGCGCTGCTGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196599	ILMN_196599	ARHGEF15	NM_177566.3	NM_177566.3		442801	60279699	NM_177566.3	Arhgef15	NP_808234.2	ILMN_3094506	002030672	A	3852	CCTGCCCTGTGTGATGCTGGAGCGGTGAAGGCAAAGGCAGTAGAATAGAC	11	-	68756890-68756939	11qB3	Mus musculus Rho guanine nucleotide exchange factor (GEF) 15 (Arhgef15), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC144141; MGC102247; MGC144142; D530030K12Rik; D130071N09; RP23-396M19.6	MGC144141; MGC102247; MGC144142; D530030K12Rik; D130071N09; RP23-396M19.6
Mus musculus	RefSeq	ILMN_196599	ILMN_196599	ARHGEF15	NM_177566.3	NM_177566.3		442801	60279699	NM_177566.3	Arhgef15	NP_808234.2	ILMN_3022252	006130730	I	2134	AGGTTCTGGACTATGCCCATCGCTCCCTGGTGCAGGCCCAGCAGGTTCCT	11	-	68760574-68760623	11qB3	Mus musculus Rho guanine nucleotide exchange factor (GEF) 15 (Arhgef15), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC144141; MGC102247; MGC144142; D530030K12Rik; D130071N09; RP23-396M19.6	MGC144141; MGC102247; MGC144142; D530030K12Rik; D130071N09; RP23-396M19.6
Mus musculus	MEEBO	ILMN_210938	ILMN_210938	9030405D14RIK	scl41312.4_596	NM_027819.1			21313549	NM_027819.1	9030405D14Rik		ILMN_2610790	002970601	S	1873	ACCAGCCCTTACTGAGTCTTTGGGCAGGGTGGGCAGCTCCATCTTCCACT										
Mus musculus	RefSeq	ILMN_216754	ILMN_260100	KLHL21	NM_001033352.3	NM_001033352.3		242785	146198742	NM_001033352.3	Klhl21	NP_001028524.1	ILMN_1229082	005960475	S	3761	GCCTTAGGAAGGCGGCACTCAGTCACCAGTGGCTGGGCAGATTTGTATAT				4qE2	Mus musculus kelch-like 21 (Drosophila) (Klhl21), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0469; 1810045K06Rik; D330008A20	mKIAA0469; 1810045K06Rik; D330008A20
Mus musculus	RefSeq	ILMN_197996	ILMN_197996	LOC224402	XM_139694.2	XM_139694.2			38080036	XM_139694.2	LOC224402		ILMN_2530115	000430441	S	241	ATAACTGAAGAGCTGTCTATCCCTAACACCTACGTCAACATCTACAGCTA										
Mus musculus	MEEBO	ILMN_222632	ILMN_222632	D630028G08RIK	scl38843.1.1_4	NM_177147.2			31342913	NM_177147.2	D630028G08Rik		ILMN_2752561	004010246	S	2429	CACAACAAGAAATCAGTAAGCAAGTGGGTTTGCAGATGCTATTCCTGAAG										
Mus musculus	RefSeq	ILMN_186275	ILMN_261789	SIX4	NM_011382.2	NM_011382.2		20474	118130178	NM_011382.2	Six4	NP_035512.1	ILMN_1219845	004060064	S	5307	CTAGTAGAGAGAATGGTCTCTAGCATTCAAAGGAGGTTCATTCCCTCCCC	12	-	74201461-74201510	12qC3	Mus musculus sine oculis-related homeobox 4 homolog (Drosophila) (Six4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The orderly movement of myoblasts from one site to another, often during the development of a multicellular organism. A myoblast is a cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51451] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	TrexBF; AI047561; AREC3	TrexBF; AI047561; AREC3
Mus musculus	Riken	ILMN_201780	ILMN_201780	2210409H10RIK	ri|2210409H10|ZX00054A04|AK008872|1330					AK008872	2210409H10Rik		ILMN_2544533	004760521	S	1090	TTTGCTTGGGCCCTGCAGCGACACAGAGGTTCTGGCACACGGGCTAGGTT										
Mus musculus	RefSeq	ILMN_193892	ILMN_193892	VMN2R42	NM_009493.1	NM_009493.1		22310	6678542	NM_009493.1	Vmn2r42	NP_033519.1	ILMN_1213564	001030132	S	3480	GGGAAGTGCTGGGCATTGGGGATGTAGGGATATCATCTTGGAGATGGCAG	7	+	9943922-9943971	7qA1	Mus musculus vomeronasal 2, receptor 42 (Vmn2r42), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193892	ILMN_193892	VMN2R42	NM_009493.1	NM_009493.1		22310	6678542	NM_009493.1	Vmn2r42	NP_033519.1	ILMN_2542820	005960291	S	3546	GGAAGAGTCAGTGGGGCAAACCAGGAGGGGGATAACTACTAGATTGTAAC	7	+	9943988-9944037	7qA1	Mus musculus vomeronasal 2, receptor 42 (Vmn2r42), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197834	ILMN_243824	LOC674281	XR_004633.1	XR_004633.1		674281	94372268	XR_004633.1	LOC674281		ILMN_2529531	004390673	S	484	TCTGAAACATAGGAGGAAGAGGAGCCCAGCGTTGTCATCATGAGGCCATG					PREDICTED: Mus musculus similar to Prkr interacting protein 1 (IL11 inducible) (LOC674281), mRNA.					
Mus musculus	Riken	ILMN_205285	ILMN_205285	4833406C17RIK	ri|4833406C17|PX00313F01|AK029366|1682					AK029366	4833406C17Rik		ILMN_1242037	007000180	S	1452	CCTAGGATGTGTGTCACGTGTTCCTTTTCTTTGCTTGGCTCAGATCCATG										
Mus musculus	MEEBO	ILMN_195720	ILMN_195720	SCL0003176.1_43	scl0003176.1_43	AK051426.1			26094530	AK051426.1	scl0003176.1_43		ILMN_2518068	006650678	S	7	CTTTTGCGCAAGATGGCTGCTGCGGGGGCATTCGCGTACTGAGTGCTAGC										
Mus musculus	RefSeq	ILMN_211870	ILMN_211870	ZFP709	NM_145624.3	NM_145624.3		236193	142366804	NM_145624.3	Zfp709	NP_663599.2	ILMN_1248268	005570754	S	3921	CTGTAACCATAAGTGGCCATGTATTTTTGTCATTAAAATCACTTTCCCCC	8	+	74416410-74416459	8qB3.3	Mus musculus zinc finger protein 709 (Zfp709), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC28841; BC021921; HIT-40	MGC28841; BC021921; HIT-40
Mus musculus	RefSeq	ILMN_211870	ILMN_211870	ZFP709	NM_145624.3	NM_145624.3		236193	142366804	NM_145624.3	Zfp709	NP_663599.2	ILMN_1227120	003830128	S	3198	GGGGGTTGATTTCTTCCTTTCAGCTCACAGTTCATTATGGCAAGGAAGTC	8	+	74415687-74415736	8qB3.3	Mus musculus zinc finger protein 709 (Zfp709), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC28841; BC021921; HIT-40	MGC28841; BC021921; HIT-40
Mus musculus	RefSeq	ILMN_211870	ILMN_211870	ZFP709	NM_145624.3	NM_145624.3		236193	142366804	NM_145624.3	Zfp709	NP_663599.2	ILMN_1228695	004880292	S	20	TTCCGGCGCGGTGCTGTCCGGTCAGCTGAGAACCCGAGGTGACTGATCGA	8	+	74405986-74406035	8qB3.3	Mus musculus zinc finger protein 709 (Zfp709), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC28841; BC021921; HIT-40	MGC28841; BC021921; HIT-40
Mus musculus	RefSeq	ILMN_215103	ILMN_215103	TAF9	NM_027139.3	NM_027139.3		108143	31980812	NM_027139.3	Taf9	NP_081415.1	ILMN_3144963	003850458	A	78	GGTACACCAGGGGTTGGAAAAACCACACTAGGCAAAGAACTTGCATCAAG	13	+	101754453-101754502	13qD1	Mus musculus TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf9), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]	AA673500; 4921516M08Rik; 2810046E22Rik; 2310012M09Rik; Taf2g; AU045423; MGC117979	AA673500; 4921516M08Rik; 2810046E22Rik; 2310012M09Rik; Taf2g; AU045423; MGC117979
Mus musculus	RefSeq	ILMN_215103	ILMN_215103	TAF9	NM_027139.3	NM_027139.3		108143	31980812	NM_027139.3	Taf9	NP_081415.1	ILMN_2655555	001170102	S	871	TAATATGGTATCACAGAATACAGCCGAGTCAGCAAATGCACTGAAACGGA	13	+	101755996-101756045	13qD1	Mus musculus TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf9), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]	AA673500; 4921516M08Rik; 2810046E22Rik; 2310012M09Rik; Taf2g; AU045423; MGC117979	AA673500; 4921516M08Rik; 2810046E22Rik; 2310012M09Rik; Taf2g; AU045423; MGC117979
Mus musculus	RefSeq	ILMN_209230	ILMN_209230	RABGAP1L	NM_013862.3	NM_013862.3		29809	31560880	NM_013862.3	Rabgap1l	NP_038890.2	ILMN_2750778	002100347	S	1626	CAGAGAGAATCTGACAAGGAGGAGCCCATCACCCCTACTAGTGCTGGGGG	1	-	162518752-162518801	1qH2.1	Mus musculus RAB GTPase activating protein 1-like (Rabgap1l), transcript variant 1, mRNA. XM_924767 XM_924771 XM_924774	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence ISO]	mKIAA0471; HHL; 5830411O09Rik; 8430421H08Rik; 9630005B12Rik; AW049894; Hh1	mKIAA0471; HHL; 5830411O09Rik; 8430421H08Rik; 9630005B12Rik; AW049894; Hh1
Mus musculus	MEEBO	ILMN_186883	ILMN_186883	2700084L06RIK	scl38994.14_327				37718980	NM_198164	2700084L06Rik		ILMN_2439313	007330722	S	16	GTCATTTTCTGCACGCACCCCCTCTGTATGATTAGATATTGCCATGGCTC										
Mus musculus	MEEBO	ILMN_186120	ILMN_186120	RTN4	scl41744.13_26				34610205	NM_024226	Rtn4		ILMN_1239786	006520138	S	93	GATTGTACTGCGTCAGCTTGCTCCACACCCCAAAGACATCAGGTGACTCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISS]	Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence ISO]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]		
Mus musculus	Riken	ILMN_207336	ILMN_207336	5930426L19RIK	ri|5930426L19|PX00646G19|AK077861|2556					AK077861	5930426L19Rik		ILMN_1225242	005340113	S	2310	CACAGGCACTGGACAGAAGAGGGGCAGAGGGAGGAAACAGAAAAGGGTTC										
Mus musculus	RefSeq	ILMN_221875	ILMN_221875	ZFP704	NM_133218.1	NM_133218.1		170753	18875369	NM_133218.1	Zfp704	NP_573481.1	ILMN_1228629	000510731	S	1800	TGGCAGCAGCTTCAGCATTTCCTGGCAGTCTCCCCCAGTCACTTTCACTG	3	-	9445967-9446016	3qA1	Mus musculus zinc finger protein 704 (Zfp704), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C030034L19Rik; C030026M03; Gig1	C030034L19Rik; C030026M03; Gig1
Mus musculus	RefSeq	ILMN_205888	ILMN_221875	ZFP704	NM_133218.1	NM_133218.1		170753	18875369	NM_133218.1	Zfp704	NP_573481.1	ILMN_1258760	004120037	S	4704	GCCTCAGGCTAGCAGCCAGCTCACCAACTCTCATGCTTTCTGTTTCTCCA	3	-	9436100-9436149	3qA1	Mus musculus zinc finger protein 704 (Zfp704), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C030034L19Rik; C030026M03; Gig1	C030034L19Rik; C030026M03; Gig1
Mus musculus	RefSeq	ILMN_221875	ILMN_221875	ZFP704	NM_133218.1	NM_133218.1		170753	18875369	NM_133218.1	Zfp704	NP_573481.1	ILMN_1225146	004730224	S	13524	CCCCCAGAGAGGAGGATTTGCTGGGTAGTCCTCAAAGCATGTAGTAGAGA	3	-	9427280-9427329	3qA1	Mus musculus zinc finger protein 704 (Zfp704), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C030034L19Rik; C030026M03; Gig1	C030034L19Rik; C030026M03; Gig1
Mus musculus	RefSeq	ILMN_186900	ILMN_221875	ZFP704	NM_133218.1	NM_133218.1		170753	18875369	NM_133218.1	Zfp704	NP_573481.1	ILMN_2439453	006620288	S	3988	TTGACCAAACAGTTGATGTCTCAATCTCCACGTTGCTCAGGGCCTCTTGG	3	-	9436816-9436865	3qA1	Mus musculus zinc finger protein 704 (Zfp704), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C030034L19Rik; C030026M03; Gig1	C030034L19Rik; C030026M03; Gig1
Mus musculus	RefSeq	ILMN_235312	ILMN_235312	EG434459	NM_001013816.1	NM_001013816.1		434459	62000675	NM_001013816.1	EG434459	NP_001013838.1	ILMN_3078706	003450156	I	1011	CTATGCTCTGGATCAGCAAGAGTGAGACATGTGCTGAGGCACATCAAGAG	14	+	52282058-52282107	14qC2	Mus musculus predicted gene, EG434459 (EG434459), mRNA.					
Mus musculus	RefSeq	ILMN_235312	ILMN_235312	EG434459	NM_001013816.1	NM_001013816.1		434459	62000675	NM_001013816.1	EG434459	NP_001013838.1	ILMN_3158002	004070091	A	461	GGGGAAGACACGTGTCTGCTGGGAAAACATCATCCCAAAGTTGCAACATC	14	+	52274583-52274594:52275447-52275484	14qC2	Mus musculus predicted gene, EG434459 (EG434459), mRNA.					
Mus musculus	Riken	ILMN_206681	ILMN_206681	9330155G14RIK	ri|9330155G14|PX00316G17|AK079073|2626					AK079073	9330155G14Rik		ILMN_1259153	002970390	S	2458	GGCCCAAACAGTAGAGTGGTTAAATGGCTACAAAGTCTCCAGGCAGGTGC										
Mus musculus	RefSeq	ILMN_261913	ILMN_261913	EG240549	NM_001013762.1	NM_001013762.1		240549	62000639	NM_001013762.1	EG240549	NP_001013784.1	ILMN_2831669	004290392	S	1187	GCAGACCTGTAATGGCCAGACCTCTCTGCTGAGCCATCATCTTTGTTTAG	19	+	12701788-12701837	19qA	Mus musculus predicted gene, EG240549 (EG240549), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine [goid 47961] [evidence IEA]	MGC107682	MGC107682
Mus musculus	Riken	ILMN_202850	ILMN_202850	9930022E02RIK	ri|9930022E02|PX00120E20|AK079439|1229					AK079439	9930022E02Rik		ILMN_1226845	002710687	S	593	CTCAGCTTCTGATCCATGAAAGAATTCACACTGGAGAGAAACCGTATTCA										
Mus musculus	RefSeq	ILMN_200518	ILMN_200518	LOC386458	XM_359416.1	XM_359416.1			38083086	XM_359416.1	LOC386458		ILMN_1232045	004230435	S	121	CGGCTCCCGGAGGCCGCTCCCCGGACGCTGGGCCCCACAGCTACTCGCTG										
Mus musculus	Riken	ILMN_205335	ILMN_205335	A630025C20RIK	ri|A630025C20|PX00144D24|AK041621|1864					AK041621	A630025C20Rik		ILMN_1233499	004890725	S	551	GCAAGAGCACGCAAAAATCATTCGACTCCAGAGACAAGCAGAAGAGTTCC										
Mus musculus	RefSeq	ILMN_209558	ILMN_209558	D430028G21RIK	NM_144888.1	NM_144888.1		228607	21450262	NM_144888.1	D430028G21Rik	NP_659137.1	ILMN_2596961	004200653	S	2599	AGCGGGCAGCTCTTCCTTTTACTGGGCTCCTCTGAGTTTGAAGGATACAG	2	+	131073336-131073385	2qF1	Mus musculus RIKEN cDNA D430028G21 gene (D430028G21Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC25836; Mavs; Visa; RP23-387C21.3	MGC25836; Mavs; Visa; RP23-387C21.3
Mus musculus	MEEBO	ILMN_195320	ILMN_195320	4930533K18RIK	scl37836.1.334_25						4930533K18Rik		ILMN_2514522	000160201	S	18	CTTGATGTAGCAAAGGGAATATGGCACCAGGGCCTGCAGAGTTGTTGGTG										
Mus musculus	MEEBO	ILMN_188893	ILMN_188893	MAPK8	scl45735.13_394				31980670	NM_016700	Mapk8		ILMN_2456617	000070184	S	17	CCGTGGGTTATCGTTCATGCCCTAGTCATTCAACATGCACCACTGGGTGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of introducing a phosphate group into a JUN protein [goid 7258] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IMP]; The process of introducing a phosphate group into a JUN protein [goid 7258] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]		
Mus musculus	RefSeq	ILMN_232033	ILMN_232033	KRT40	NM_001039666.1	NM_001039666.1		406221	89179317	NM_001039666.1	Krt40	NP_001034755.1	ILMN_2856320	003130487	S	301	GCCAGCTATCTGGAGAGGGTGAGAAGCCTGGAAGAGAACAACGCAGAGCT	11	-	99404122-99404171	11qD	Mus musculus keratin 40 (Krt40), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC141167; Ka36	MGC141167; Ka36
Mus musculus	RefSeq	ILMN_213836	ILMN_213836	4921523A10RIK	NM_173449.1	NM_173449.1		110332	27734091	NM_173449.1	4921523A10Rik	NP_775625.1	ILMN_2861482	000510424	S	2127	CAGCAAACAGTGCTACAAAGACTCCCGTGAAAACCATTCCTTAGACCGGG	17	-	52972688-52972737	17qC	Mus musculus RIKEN cDNA 4921523A10 gene (4921523A10Rik), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]		
Mus musculus	Riken	ILMN_204618	ILMN_204618	SLC1A1	ri|B230216M09|PX00069P21|AK045632|1763					AK045632	Slc1a1		ILMN_2566367	000830014	S	1378	GGGCCCAGAAATGGTTCTGCTGGTCTATAAGTCCCTTGCCCAAGACGTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glutamate(out) + Na+(out) = glutamate(in) + Na+(in) [goid 15501] [evidence IDA]		
Mus musculus	RefSeq	ILMN_216367	ILMN_216367	RSHL2A	NM_025789.4	NM_025789.4		66832	141803214	NM_025789.4	Rshl2a	NP_080065.3	ILMN_2670271	002450553	S	1350	GAAGAGGGGGGACACCTTATGGCAGAGTGACCAAGAGCCAGAGAGCAGCT	17	+	8172180-8172208:8172209-8172229	17qA1	Mus musculus radial spokehead-like 2A (Rshl2a), mRNA.				1700012G05Rik; 4930524H12Rik; Rshl2; R74860	1700012G05Rik; 4930524H12Rik; Rshl2; R74860
Mus musculus	RefSeq	ILMN_232526	ILMN_232526	CSN1S2B	NM_009973.1	NM_009973.1		12992	7106272	NM_009973.1	Csn1s2b	NP_034103.1	ILMN_2875629	001440035	S	637	TCTCTGCAGGGTTGATGACTATTGAGACTGTCTTCACTTCTGCTCCCATG	5	+	88253351-88253400	5qE1	Mus musculus casein alpha s2-like B (Csn1s2b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Csne; AW987150; Csnd	Csne; AW987150; Csnd
Mus musculus	Riken	ILMN_206736	ILMN_206736	D230010H24RIK	ri|D230010H24|PX00188I11|AK084225|993					AK084225	D230010H24Rik		ILMN_1235322	005090546	S	778	CCAGCCGAGTGGCCTTGTCATTCTCCATCAGTGTTCTCTTTATTCCCGCC										
Mus musculus	Riken	ILMN_202986	ILMN_202986	6330510M13RIK	ri|6330510M13|PX00042D24|AK031958|3231					AK031958	6330510M13Rik		ILMN_2553847	000110475	S	3016	GGCTTACTGTCAGCAACTGAATACTGGGACACACCCATATGTCTCAGCAC										
Mus musculus	Riken	ILMN_206435	ILMN_206435	C230042N14RIK	ri|C230042N14|PX00175I08|AK082372|2428					AK082372	C230042N14Rik		ILMN_2580056	003190142	S	1660	GAGTAATTGGTTGTGGGGGTTGGGAGTGGGACTTTGAATGCTCAATGCAC										
Mus musculus	RefSeq	ILMN_199104	ILMN_199104	LOC227092	XM_123660.2	XM_123660.2			38090926	XM_123660.2	LOC227092		ILMN_1249984	000110653	S	505	GCAGCAAAAAAGGGGGTGGTCAAGCCCAGGACCCAGGAGTGTGAGAAGCA										
Mus musculus	RefSeq	ILMN_216230	ILMN_224508	CLDN5	NM_013805.3	NM_013805.3		12741	142348145	NM_013805.3	Cldn5	NP_038833.2	ILMN_1241293	000430386	S	1307	GGCCCTGTAGGTACCAGAGCCTTAGAGGGGTTGCCTTCCTCCTGGAAGCT	16	+	18766922-18766971	16qA3	Mus musculus claudin 5 (Cldn5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IC ]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MBEC1; AI854493; MGC102088; Tmvcf	MBEC1; AI854493; MGC102088; Tmvcf
Mus musculus	RefSeq	ILMN_211416	ILMN_231825	PRELID2	NM_029942.1	NM_029942.1		77619	113931157	NM_029942.1	Prelid2	NP_084218.1	ILMN_2615672	006650156	S	165	GACTCATCTATAGAAAGAGGATTGCTATCTGTCAGAATGTGGTTCCAGAG	18	-	42094833-42094882	18qB3	Mus musculus PRELI domain containing 2 (Prelid2), mRNA.				1700003A01Rik; C330008K14Rik	1700003A01Rik; C330008K14Rik
Mus musculus	RefSeq	ILMN_215352	ILMN_242903	1700006H03RIK	XM_917380.3	XM_917380.3		74174	149267147	XM_917380.3	1700006H03Rik	XP_922473.1	ILMN_1225956	004390554	S	672	TTATTCCTGCTACCAAGGGTTCTTCTTTTTTCTCTTTATCTAATTATAGA				15qF3	PREDICTED: Mus musculus RIKEN cDNA 1700006H03 gene, transcript variant 3 (1700006H03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216360	ILMN_216360	NCRNA00117	NM_026465.2	NM_026465.2		67939	142353003	NM_026465.2	Ncrna00117	NP_080741.1	ILMN_1250771	003120767	S	343	GGCTGTGCCACACCTTTGTCACTCTTCTGCGATGATGGAGATGTTAAATT	11	-	29413401-29413450	11qA3.3	Mus musculus non-protein coding RNA 117 (Ncrna00117), mRNA.				RP23-92B18.3; MGC143640	RP23-92B18.3; MGC143640
Mus musculus	RefSeq	ILMN_206176	ILMN_310483	ENSMUSG00000074822	XM_001480101.1	XM_001480101.1		545459	149249998	XM_001480101.1	ENSMUSG00000074822	XP_001480151.1	ILMN_2578154	000150292	S	470	AGGCCTGAGCAGTCTCTGACTCGGAGGAGGCAACAAGGTAGGAGAGTAAC	2	-	127095396-127095444:127095445-127095445	2qF1	PREDICTED: Mus musculus predicted gene, ENSMUSG00000074822 (ENSMUSG00000074822), mRNA.					
Mus musculus	RefSeq	ILMN_208690	ILMN_208690	CHMP7	NM_134078.2	NM_134078.2		105513	21359826	NM_134078.2	Chmp7	NP_598839.2	ILMN_2843548	002450327	S	2274	AGGGGCCTGAGCCAGGATGTGCAATAAGAGGCAGGGCGCTGACCTGCCGC	14	-	68452405-68452454	14qD2	Mus musculus CHMP family, member 7 (Chmp7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AW550775; 4930596K11Rik; 6330407G04Rik; AI450338; MGC29816	AW550775; 4930596K11Rik; 6330407G04Rik; AI450338; MGC29816
Mus musculus	Riken	ILMN_207285	ILMN_207285	FOLH1	ri|G630038H05|PL00013N11|AK090289|2948					AK090289	Folh1		ILMN_1215172	004150047	S	2512	GACTGTGGTGCTACCAAGTACACAGAGCCATGGCCAGTATTGAAAGGAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving folic acid and its derivatives [goid 6760] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187459	ILMN_232378	EYA1	NM_010164.2	NM_010164.2		14048	84579836	NM_010164.2	Eya1	NP_034294.2	ILMN_2444322	000630433	S	154	TGCTATCTGCCGCTGCCGTTCGCTGGGGCGCAAAGCCGTTCCCAAACAGA	1	-	14300077-14300126	1qA3	Mus musculus eyes absent 1 homolog (Drosophila) (Eya1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IGI]; The process by which the anatomical structures of the outer ear are generated and organized. Morphogenesis pertains to the creation of form. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull [goid 42473] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]	bor	bor
Mus musculus	RefSeq	ILMN_185847	ILMN_232378	EYA1	NM_010164.2	NM_010164.2		14048	84579836	NM_010164.2	Eya1	NP_034294.2	ILMN_2430513	003170711	S	3429	GTGGCTCACAACTTAAAAGTTTTGAAGTCTTCCTGACCACCTCCCCGACT	1	-	14159890-14159939	1qA3	Mus musculus eyes absent 1 homolog (Drosophila) (Eya1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IGI]; The process by which the anatomical structures of the outer ear are generated and organized. Morphogenesis pertains to the creation of form. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull [goid 42473] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]	bor	bor
Mus musculus	RefSeq	ILMN_185847	ILMN_232378	EYA1	NM_010164.2	NM_010164.2		14048	84579836	NM_010164.2	Eya1	NP_034294.2	ILMN_2686435	005270343	S	2460	CAGGATGTACCAATTTCAGCATATGGATGCATAGCTGCTGCGGGCTTGAC	1	-	14160859-14160908	1qA3	Mus musculus eyes absent 1 homolog (Drosophila) (Eya1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IGI]; The process by which the anatomical structures of the outer ear are generated and organized. Morphogenesis pertains to the creation of form. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull [goid 42473] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]	bor	bor
Mus musculus	RefSeq	ILMN_185847	ILMN_232378	EYA1	NM_010164.2	NM_010164.2		14048	84579836	NM_010164.2	Eya1	NP_034294.2	ILMN_2638487	003800678	S	625	TAACCAGCCCGCATAGCCGACTGAGTGGTAGTAGCGAATCCCCCAGTGGT	1	-	14292908-14292957	1qA3	Mus musculus eyes absent 1 homolog (Drosophila) (Eya1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IGI]; The process by which the anatomical structures of the outer ear are generated and organized. Morphogenesis pertains to the creation of form. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull [goid 42473] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]	bor	bor
Mus musculus	RefSeq	ILMN_196508	ILMN_196508	4930447F04RIK	XM_135902.1	XM_135902.1			20984044	XM_135902.1	4930447F04Rik		ILMN_1223012	001110403	S	165	CTCAGGTAACATTGACTCCAATGACTAAACGGAGGAAGATGCGGAAGCCG										
Mus musculus	RefSeq	ILMN_186829	ILMN_186829	UTS2D	NM_198166.3	NM_198166.3		224065	61744465	NM_198166.3	Uts2d	NP_937809.1	ILMN_2438839	002060725	S	233	GCAGCTCAAGAGAAGTTGACCCGAAATCCTGGTTTACAGAGGCCCTTCCA	16	-	27364795-27364844	16qB2	Mus musculus urotensin 2 domain containing (Uts2d), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	U2B; Gm538; Urp	U2B; Gm538; Urp
Mus musculus	RefSeq	ILMN_215948	ILMN_215948	4933434E20RIK	NM_027500.2	NM_027500.2		99650	142387754	NM_027500.2	4933434E20Rik	NP_081776.1	ILMN_1225284	007150408	S	900	GTATAGGAGAATACAGAAGAGCTACACTGTTCTCATAAAACTTGCCAGGA	3	+	89862839-89862888	3qF1	Mus musculus RIKEN cDNA 4933434E20 gene (4933434E20Rik), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			NS5ATP4; AI462154; 5730552F22Rik; NICE-3	NS5ATP4; AI462154; 5730552F22Rik; NICE-3
Mus musculus	RefSeq	ILMN_200468	ILMN_200468	LOC383240	XM_356940.1	XM_356940.1			38082330	XM_356940.1	LOC383240		ILMN_1239331	006980017	S	586	GCTGTGTTCACAGACCTGCAGCTCCTCTTGTATCTCAGGAGAAAGAGGCG										
Mus musculus	RefSeq	ILMN_209651	ILMN_209651	GSN	NM_146120.3	NM_146120.3		227753	118130216	NM_146120.3	Gsn	NP_666232.2	ILMN_2679386	004260709	S	13	CTCACCGTCGCCATGGCTCCGTACCGCTCTTCACTGCTCTGCGCGCTGCT	2	+	35137972-35137983:35137984-35138021	2qB	Mus musculus gelsolin (Gsn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC28083	MGC28083
Mus musculus	MEEBO	ILMN_184817	ILMN_184817	2810430P21RIK	scl30423.1.1_293						2810430P21Rik		ILMN_2421822	007050703	S	20	TTGGGACCCACAGCCCAGTTCTCAGGAGATACACGTTGCAGGACCACATG										
Mus musculus	RefSeq	ILMN_198372	ILMN_198372	LOC328949	XM_140309.3	XM_140309.3			38084646	XM_140309.3	LOC328949		ILMN_2531455	000830433	S	777	CGATGCTGCCTCTCCAGCTTTGTCACTTGCCGAACTAAGGACGAACAGCG										
Mus musculus	Riken	ILMN_202615	ILMN_202615	E430033B07RIK	ri|E430033B07|PX00100N08|AK088947|1082					AK088947	E430033B07Rik		ILMN_2550962	002900403	S	421	CTGGGGAACGAGAGTACCAGTGAGTATGTTTGGCCTTGAATTTTTTCTGG										
Mus musculus	RefSeq	ILMN_219329	ILMN_219329	CCT5	NM_007637.2	NM_007637.2		12465	133892561	NM_007637.2	Cct5	NP_031663.1	ILMN_2707308	004730253	S	1699	CGTAAGCCTGGAGAATCTGAAGAATAAACTGTACCATTTACCACTGTGAC	15	-	31520659-31520682:31520683-31520708	15qB2	Mus musculus chaperonin containing Tcp1, subunit 5 (epsilon) (Cct5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	mKIAA0098; Ccte	mKIAA0098; Ccte
Mus musculus	RefSeq	ILMN_210259	ILMN_312838	SPRR2G	NR_003548.1	NR_003548.1		20761	147899157	NR_003548.1	Sprr2g		ILMN_2603791	004220037	S	533	TACCAGATGTTCAGAGGAAAGACTAGTAGATGTCCCTCAGTGCCTTCACA				3qF1	Mus musculus small proline-rich protein 2G (Sprr2g), non-coding RNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185852	ILMN_243595	BCAT1	NM_007532.3	NM_007532.3		12035	142375715	NM_007532.3	Bcat1	NP_031558.2	ILMN_1227327	003830424	S	2329	GAATTGTCTTATGTTTTAAGATTATCTTGGAATTGAAGCGATTGCCCTGG	6	-	144947754-144947803	6qG3	Mus musculus branched chain aminotransferase 1, cytosolic (Bcat1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9082] [evidence IEA]; The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9081] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9083] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid. Includes catalysis of the reaction: L-leucine + 2-oxoglutarate = 4-methyl-2-oxopentanoate + L-glutamate and anaologous reactions involving L-isoleucine and L-valine [goid 4084] [evidence IDA]	Eca39; BCATc	Eca39; BCATc
Mus musculus	RefSeq	ILMN_216947	ILMN_216947	PTTG1	NM_013917.1	NM_013917.1		30939	7305426	NM_013917.1	Pttg1	NP_038945.1	ILMN_2809167	007380020	S	823	GGGAATCTGGTAAGGGAGTCCGTTCAAACTCGGGCTGTAAGCAACTTGTC	11	-	43234567-43234616	11qA5	Mus musculus pituitary tumor-transforming 1 (Pttg1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner; this pairing off, referred to as synapsis, permits genetic recombination. One homolog (both sister chromatids) of each morphologic type goes into each of the resulting chromosome sets [goid 45143] [evidence IDA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence ISA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA];  [goid 4869] [evidence IDA]	Pttg3; PTTG; Securin; AW555095; C87862	Pttg3; PTTG; Securin; AW555095; C87862
Mus musculus	MEEBO	ILMN_223793	ILMN_223793	ATP6V1C2	scl42599.15.1_133				19526869	NM_133699	Atp6v1c2		ILMN_1244260	006370709	S	1604	CCGAGTCCTGCAGGATTCTGACTCAGAAGATAATCACAGACGTTAGTTAG						A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IDA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]		
Mus musculus	Riken	ILMN_204057	ILMN_204057	A130070G01RIK	ri|A130070G01|PX00125K11|AK037997|2219					AK037997	A130070G01Rik		ILMN_2562032	007400092	S	2120	GCTGAGGTGAGTCGGTGGTACCTGGTAAAGCTACAAAGCTGGTTTGGTGA										
Mus musculus	RefSeq	ILMN_250734	ILMN_250734	FBXO30	NM_027968.1	NM_027968.1		71865	58037260	NM_027968.1	Fbxo30	NP_082244.1	ILMN_2861445	002690452	S	3649	GACAGGGACATTAAGTGATTTGTCCAGTTAAATTCTGGCATTGGTAAGCG	10	+	10986875-10986924	10qA1	Mus musculus F-box protein 30 (Fbxo30), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1700026A16Rik	1700026A16Rik
Mus musculus	RefSeq	ILMN_232898	ILMN_232898	WFDC13	NM_001012704.1	NM_001012704.1		408190	60592761	NM_001012704.1	Wfdc13	NP_001012722.1	ILMN_3160331	002510670	S	651	GAAGAACCGAGGACACTGATGAGACACTGCCGCTCCTCTCACACGGCATG	2	+	164512783-164512832	2qH3	Mus musculus WAP four-disulfide core domain 13 (Wfdc13), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Wfdc13l1	Wfdc13l1
Mus musculus	RefSeq	ILMN_221698	ILMN_221698	ACAD10	NM_028037.3	NM_028037.3		71985	146141208	NM_028037.3	Acad10	NP_082313.1	ILMN_2739219	004040482	S	1776	CACTGCACCTTCCCAGGCAACAGAGAACCACGCTGGTGCATGGTGACTTC				5qF	Mus musculus acyl-Coenzyme A dehydrogenase family, member 10 (Acad10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	2410021P16Rik	2410021P16Rik
Mus musculus	RefSeq	ILMN_221698	ILMN_221698	ACAD10	NM_028037.3	NM_028037.3		71985	146141208	NM_028037.3	Acad10	NP_082313.1	ILMN_2744129	000430687	S	3541	GCGCTTCGCTGATGGCCCTGATGAAGTACACCAGCTGACAGTGGCTAAGA				5qF	Mus musculus acyl-Coenzyme A dehydrogenase family, member 10 (Acad10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	2410021P16Rik	2410021P16Rik
Mus musculus	RefSeq	ILMN_186007	ILMN_246117	LSAMP	NM_175548.3	NM_175548.3		268890	118130292	NM_175548.3	Lsamp	NP_780757.1	ILMN_2709374	004560039	S	2164	GGTCCTTGCATGGGGGATAGCTATACAAATGCTACATCAATGTGAGGCTG	16	+	42146023-42146072	16qB4	Mus musculus limbic system-associated membrane protein (Lsamp), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Lam; Lamp; B130007O04Rik; 5430428I19	Lam; Lamp; B130007O04Rik; 5430428I19
Mus musculus	RefSeq	ILMN_186007	ILMN_246117	LSAMP	NM_175548.3	NM_175548.3		268890	118130292	NM_175548.3	Lsamp	NP_780757.1	ILMN_1255332	002570474	S	347	TGATGAAGGATCCTACACATGCTCAGTTCAGACACAGCATGAGCCCAAGA	16	+	41889184-41889233	16qB4	Mus musculus limbic system-associated membrane protein (Lsamp), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Lam; Lamp; B130007O04Rik; 5430428I19	Lam; Lamp; B130007O04Rik; 5430428I19
Mus musculus	Riken	ILMN_202602	ILMN_202602	BMP7	ri|9430012M17|PX00107H08|AK020411|981					AK020411	Bmp7		ILMN_1249526	002230100	S	843	GAATGATCTAGGTACGATGTGTTCAGAGAAGGAGGAGGCTGGAGGGCTGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50768] [evidence IDA]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized during embryonic development. Morphogenesis pertains to the creation of form [goid 48596] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IDA]; The process by which the anatomical structures of a tube are generated and organized. Morphogenesis pertains to the creation of form. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system [goid 35239] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence TAS]		
Mus musculus	RefSeq	ILMN_188755	ILMN_217642	FUT9	NM_010243.3	NM_010243.3		14348	84794634	NM_010243.3	Fut9	NP_034373.1	ILMN_1256652	006280156	S	7172	GAGTCTCAGAAGCTTATTGATAGGTAGGATATGGCAACATGTTATAACAC	4	-	25541248-25541297	4qA3	Mus musculus fucosyltransferase 9 (Fut9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha(1,3)-linkage [goid 46920] [evidence IDA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IEA]	mFUT9; mFuc-TIX; AU067636; AI746471	mFUT9; mFuc-TIX; AU067636; AI746471
Mus musculus	RefSeq	ILMN_217642	ILMN_217642	FUT9	NM_010243.3	NM_010243.3		14348	84794634	NM_010243.3	Fut9	NP_034373.1	ILMN_2685821	006110360	S	3197	GACATAAGCTCCCTTAGCATGGAATCATTTGAGCAAAGAAAGACCACAGA	4	-	25545223-25545272	4qA3	Mus musculus fucosyltransferase 9 (Fut9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha(1,3)-linkage [goid 46920] [evidence IDA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IEA]	mFUT9; mFuc-TIX; AU067636; AI746471	mFUT9; mFuc-TIX; AU067636; AI746471
Mus musculus	Riken	ILMN_204970	ILMN_204970	SLAP	ri|A930009B09|PX00065N06|AK044358|1726					AK044358	Slap		ILMN_1245962	004570382	S	1442	CATCCCAGGGAAGTTTCTGAAGGCTGTTGACCTAAGCAGCCAATGCGTCC										
Mus musculus	RefSeq	ILMN_197799	ILMN_232891	GABBR2	NM_001081141.1	NM_001081141.1		242425	124487262	NM_001081141.1	Gabbr2	NP_001074610.1	ILMN_2588067	005560554	S	1441	CCAGGACTTCAACTACACAGACCACACCCTGGGCAGAATCATCCTCAACG	4	-	46800332-46800381	4qB1	Mus musculus gamma-aminobutyric acid (GABA) B receptor 2 (Gabbr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-B receptors are G-protein coupled receptors [goid 4965] [evidence IEA]	Gm425; Gpr51; Gb2; GABABR2	Gm425; Gpr51; Gb2; GABABR2
Mus musculus	Riken	ILMN_204489	ILMN_204489	B130018L10RIK	ri|B130018L10|PX00157P23|AK045002|4564					AK045002	B130018L10Rik		ILMN_1251838	005270242	S	4230	CAGCCAATGGCAGCTCTGTAGTGCAGGTCGGCTGCCTGGTCCTGTTCACT										
Mus musculus	Riken	ILMN_202038	ILMN_202038	GRB10	ri|2810002M10|ZX00053I11|AK012646|830					AK012646	Grb10		ILMN_2546546	006520368	S	201	GCACGTCAGGACAAAGTGGGGCAGTCAACGTCCAAACCCGAAAACCTAGC						That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IPI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IPI]		
Mus musculus	RefSeq	ILMN_222356	ILMN_222356	COL5A1	NM_015734.1	NM_015734.1		12831	7656986	NM_015734.1	Col5a1	NP_056549.1	ILMN_2748402	004150386	S	6001	CCCCCTGACCTTCAAAAGATGTTCTGAGGTGGTCTTGTAAAGGTCGCCAA	2	+	27892889-27892938	2qA3	Mus musculus procollagen, type V, alpha 1 (Col5a1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IMP]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell structures, including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope [goid 51128] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IGI]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204022	ILMN_204022	UBCE7IP3-PENDING	ri|A630082H19|PX00148C01|AK042325|1536					AK042325	Ubce7ip3-pending		ILMN_1228658	000110195	S	1433	GCTCTCAGGAGCTGGAGGCAGGAGGATCAGACGTTCAAGACTAGCTTCGG										
Mus musculus	Riken	ILMN_204879	ILMN_204879	NSMAF	ri|A430089F02|PX00138M04|AK040369|4278					AK040369	Nsmaf		ILMN_1250921	000540669	S	3929	ACAGCCCAGCATGGCTTCCAGTACAGCTTTGCTCACAACATAACAGCACG								Interacting selectively with a death receptor [goid 5123] [evidence TAS]		
Mus musculus	MEEBO	ILMN_185354	ILMN_185354	6720477C19RIK	scl28484.1.1_30						6720477C19Rik		ILMN_2426335	004010349	S	20	GAAGGCCTCTGACTGGGGAAGGTATGATTGGAGCCCATCCGAGGTGTCTT										
Mus musculus	RefSeq	ILMN_200195	ILMN_200195	LOC385914	XM_358996.1	XM_358996.1			38080874	XM_358996.1	LOC385914		ILMN_1242765	006660154	S	63	ACCCAGCACTCCCACCTTGCCCAGTGATGGAATTGAAAAAACCATCCAAG										
Mus musculus	RefSeq	ILMN_219018	ILMN_219018	ARHGAP6	NM_009707.3	NM_009707.3		11856	118130288	NM_009707.3	Arhgap6	NP_033837.2	ILMN_2703171	007550333	S	5059	GGGAGCAAAAAAGCTACATCTTTGCGCTTACATTGTACCAAAGGCTGAGG	X	+	165741916-165741965	XqF5	Mus musculus Rho GTPase activating protein 6 (Arhgap6), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IDA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IDA]	AI504284; RhoGAPX-1; C130038E13	AI504284; RhoGAPX-1; C130038E13
Mus musculus	MEEBO	ILMN_191549	ILMN_191549	SCL0002007.1_97	scl0002007.1_97						scl0002007.1_97		ILMN_1234020	006400687	S	20	GAGCTGGATTCATCACCTTCTTTACCTGCGTGGTATCTGACTCTGTATCG										
Mus musculus	Riken	ILMN_202252	ILMN_202252	2700016E08RIK	ri|4933402I15|PX00019G10|AK016619|1711					AK016619	2700016E08Rik		ILMN_1257512	003460370	S	810	TCAAGTGGGGGGACATGTGGATGCTATGAACGAATACAATATAGCTCTGG										
Mus musculus	Riken	ILMN_201699	ILMN_201699	1700013A01RIK	ri|1700013A01|ZX00036P08|AK005934|1139					AK005934	1700013A01Rik		ILMN_1229253	002100082	S	1010	CATTAAGGACAGGGGATGTCACAGCTACATTTTGAACCTCCTCCCTGTCA										
Mus musculus	RefSeq	ILMN_215116	ILMN_331202	6720489N17RIK	XM_001472312.1	XM_001472312.1		211378	149264427	XM_001472312.1	6720489N17Rik	XP_001472362.1	ILMN_1259440	000130367	S	2162	CTGACGGACATGGTTCCATCTTGGGCCAACCCATTTATATTAATTTACAC					PREDICTED: Mus musculus RIKEN cDNA 6720489N17 gene (6720489N17Rik), mRNA.					
Mus musculus	MEEBO	ILMN_187486	ILMN_187486	E130120C16RIK	scl36769.1.2435_19						E130120C16Rik		ILMN_2444565	000940192	S	8	CATTAGCCTCCGAAAATAGCTAAGAGTTCAATATTTGAATGTATGTCTTA										
Mus musculus	RefSeq	ILMN_243395	ILMN_243395	OLFR10	NM_206822.1	NM_206822.1		18307	45592945	NM_206822.1	Olfr10	NP_996558.1	ILMN_3003383	003450403	S	558	GGTCTGTGAAGACACAGGAGGAACAGAGGCCAAGATGTTTGTGGCCAGAG	11	+	49131607-49131656	11qB1.2	Mus musculus olfactory receptor 10 (Olfr10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	L45; MOR256-55; RP23-10M12.7; GA_x6K02T2QP88-6117098-6116163	L45; MOR256-55; RP23-10M12.7; GA_x6K02T2QP88-6117098-6116163
Mus musculus	RefSeq	ILMN_218854	ILMN_243395	OLFR10	NM_206822.1	NM_206822.1		18307	45592945	NM_206822.1	Olfr10	NP_996558.1	ILMN_2701018	004760142	S	855	CCCTCTGATCTATACCCTGAGAAACAAAGATATGAAGGGGGCTCTGTGGA	11	+	49131904-49131953	11qB1.2	Mus musculus olfactory receptor 10 (Olfr10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	L45; MOR256-55; RP23-10M12.7; GA_x6K02T2QP88-6117098-6116163	L45; MOR256-55; RP23-10M12.7; GA_x6K02T2QP88-6117098-6116163
Mus musculus	RefSeq	ILMN_219200	ILMN_243395	OLFR10	NM_206822.1	NM_206822.1		18307	45592945	NM_206822.1	Olfr10	NP_996558.1	ILMN_2705623	006650452	S	859	CTGATCTATACCCTGAGAAACAAAGATATGAAGGGGGCTCTGTGGAAGGT	11	+	49131908-49131957	11qB1.2	Mus musculus olfactory receptor 10 (Olfr10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	L45; MOR256-55; RP23-10M12.7; GA_x6K02T2QP88-6117098-6116163	L45; MOR256-55; RP23-10M12.7; GA_x6K02T2QP88-6117098-6116163
Mus musculus	RefSeq	ILMN_221922	ILMN_221922	CD14	NM_009841.3	NM_009841.3		12475	118129882	NM_009841.3	Cd14	NP_033971.1	ILMN_2742075	006020674	S	1142	GACTCTGAATCCCACTCGGAGAAGTTTAACTCTGGCGTAGTCACCGCCGG	18	-	36885026-36885075	18qB2	Mus musculus CD14 antigen (Cd14), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221373	ILMN_221373	DDIT4	NM_029083.1	NM_029083.1		74747	21312867	NM_029083.1	Ddit4	NP_083359.1	ILMN_2993109	000130634	S	1465	AGCCAGCCCATCCCGGTGCCCATGTACTGGAGGATTCAACTGTGAGGAGA	10	-	59345202-59345251	10qB4	Mus musculus DNA-damage-inducible transcript 4 (Ddit4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rtp801; REDD1; 5830413E08Rik; dig2; AA415483	Rtp801; REDD1; 5830413E08Rik; dig2; AA415483
Mus musculus	RefSeq	ILMN_210991	ILMN_210991	0610037L13RIK	NM_028754.2	NM_028754.2		74098	118130504	NM_028754.2	0610037L13Rik	NP_083030.1	ILMN_2611352	002070564	S	1457	GTTGTGCCTTCATACCTGGGAAACCTGTTTCCACACACTATTTCTCCAAT	4	+	107570313-107570362	4qC7	Mus musculus RIKEN cDNA 0610037L13 gene (0610037L13Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110008H16Rik; RP23-40G2.3	1110008H16Rik; RP23-40G2.3
Mus musculus	RefSeq	ILMN_218367	ILMN_218367	GPATCH3	NM_172876.1	NM_172876.1		242691	27370331	NM_172876.1	Gpatch3	NP_766464.1	ILMN_2962312	003830019	S	1663	ACCTGAGAAGCAGCCCAGAGCCTGGGAGCAGCCCTGAGCATGCCCAGTTT	4	+	132855978-132856027	4qD2.3	Mus musculus G patch domain containing 3 (Gpatch3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D930035B09Rik; MGC106307; Gpatc3	D930035B09Rik; MGC106307; Gpatc3
Mus musculus	RefSeq	ILMN_223548	ILMN_223548	TTC35	NM_025736.1	NM_025736.1		66736	13385195	NM_025736.1	Ttc35	NP_080012.1	ILMN_1221921	001980196	S	790	GCAAGTGCAAAAATGAAAAAAGACAACATCAAATATGCTAGTTGGGCCGC	15	+	43343849-43343898	15qB3.2	Mus musculus tetratricopeptide repeat domain 35 (Ttc35), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW209495; 4921531G14Rik; AV060620	AW209495; 4921531G14Rik; AV060620
Mus musculus	RefSeq	ILMN_223548	ILMN_223548	TTC35	NM_025736.1	NM_025736.1		66736	13385195	NM_025736.1	Ttc35	NP_080012.1	ILMN_2814431	006400392	S	1102	GCCTTGTACTGCTAGGAAGCAGGGAGATGGAGGTAATCCATGGGACAGAG	15	+	43357708-43357757	15qB3.2	Mus musculus tetratricopeptide repeat domain 35 (Ttc35), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW209495; 4921531G14Rik; AV060620	AW209495; 4921531G14Rik; AV060620
Mus musculus	RefSeq	ILMN_200447	ILMN_234641	LOC676779	XM_992807.2	XM_992807.2		676779	149253732	XM_992807.2	LOC676779	XP_997901.1	ILMN_1229301	000050121	S	465	ATCCTCAGCACTAGCCCATCTGATGTATTTAAGAGCCGTAGTTATGTGCC					PREDICTED: Mus musculus similar to IMP1 inner mitochondrial membrane peptidase-like (LOC676779), mRNA.					
Mus musculus	RefSeq	ILMN_199475	ILMN_326154	LOC100044941	XM_001473167.1	XM_001473167.1		100044941	149240606	XM_001473167.1	LOC100044941	XP_001473217.1	ILMN_2535346	001980278	S	127	GCAAAGTTGGTTATCCTCGCCGACAGCTGCCCAGCTTGGAGGAAATCTGA					PREDICTED: Mus musculus similar to ribosomal protein L30 (LOC100044941), mRNA.					
Mus musculus	RefSeq	ILMN_201323	ILMN_201323	LOC382441	XM_356505.1	XM_356505.1			38090875	XM_356505.1	LOC382441		ILMN_1257430	003060743	S	642	TCAGTACCCACCTGGCCATGGGGCCCCTCCTTCAGGCTGTATTACACAGT										
Mus musculus	RefSeq	ILMN_221207	ILMN_221207	AW049604	NM_134096.2	NM_134096.2		106014	54792125	NM_134096.2	AW049604	NP_598857.1	ILMN_2732491	003360411	S	2479	ACCTCCGAGGGCAGAGACCAGGAGACTTAAGATGTTACAGCATATTTCCC	15	+	87589670-87589719	15qE3	Mus musculus expressed sequence AW049604 (AW049604), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			TAFA5	TAFA5
Mus musculus	MEEBO	ILMN_191299	ILMN_191299	9330180I18	scl31697.6.1_62				51762721	XM_485874	9330180I18		ILMN_2477909	006370072	S	12	CCAGAGTTACAACCTCTGTCCTCACCACCCACCTTTGAGCTCACTGTTGC										
Mus musculus	MEEBO	ILMN_189430	ILMN_189430	TAF2	scl00319944.1_317						Taf2		ILMN_2461196	004070092	S	10	GGTAGTTATTTTACTTTGTTTTCAGAATTAAAATTAGTGATAATTTACAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213899	ILMN_213899	TOR1AIP2	NM_172843.2	NM_172843.2		240832	46048323	NM_172843.2	Tor1aip2	NP_766431.2	ILMN_2754220	004760255	S	4768	GACAGATGCAGCCTGTGAACACGAGAGTAGTGCAGCAAAAATGATTTTCA	1	+	157915696-157915745	1qG3	Mus musculus torsin A interacting protein 2 (Tor1aip2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA103493; Lull1; A130072J07	AA103493; Lull1; A130072J07
Mus musculus	RefSeq	ILMN_213899	ILMN_213899	TOR1AIP2	NM_172843.2	NM_172843.2		240832	46048323	NM_172843.2	Tor1aip2	NP_766431.2	ILMN_2642007	005690148	S	2398	GAGGCCAGAACAGCTGTGCTCAAAAAAGAACCTTCCCAAGCATTGGACTC	1	+	157913326-157913375	1qG3	Mus musculus torsin A interacting protein 2 (Tor1aip2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA103493; Lull1; A130072J07	AA103493; Lull1; A130072J07
Mus musculus	RefSeq	ILMN_217030	ILMN_217030	ASAH2	NM_018830.1	NM_018830.1		54447	9055167	NM_018830.1	Asah2	NP_061300.1	ILMN_2980044	004570131	S	4688	CCCACAGTGGCCATTACATCACTAGTAATCGGTGTGCCCAGCCCTGCATG	19	-	32059221-32059270	19qC1	Mus musculus N-acylsphingosine amidohydrolase 2 (Asah2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine [goid 17040] [evidence IDA]	AI585898	AI585898
Mus musculus	RefSeq	ILMN_222236	ILMN_234062	1810013D10RIK	XM_913511.2	XM_913511.2		66278	94374560	XM_913511.2	1810013D10Rik	XP_918604.1	ILMN_2746704	004670286	S	522	GGGAACTCTCATGCTGCTAGCCAGACCCCTTGTGATAGAGACTGTGTGCA				5qC1	PREDICTED: Mus musculus RIKEN cDNA 1810013D10 gene (1810013D10Rik), mRNA.					
Mus musculus	Riken	ILMN_206757	ILMN_206757	D930009B21RIK	ri|D930009B21|PX00200J19|AK086163|968					AK086163	D930009B21Rik		ILMN_1223728	006550041	S	519	AACAGTGTCCAAGCTAATACTGAGAAGTGCTTTTCAAAGCCCCCTATAGA										
Mus musculus	RefSeq	ILMN_219222	ILMN_219222	LIMD2	NM_172397.3	NM_172397.3		67803	146149336	NM_172397.3	Limd2	NP_765985.1	ILMN_2705878	004290133	S	2841	AACCTTCCTTCATAACCTTTGGGCCCAGGCCACCCTGGAGGCCCACAACT				11qE1	Mus musculus LIM domain containing 2 (Limd2), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI413966; 0610025L06Rik	AI413966; 0610025L06Rik
Mus musculus	MEEBO	ILMN_218968	ILMN_218968	D630004N19RIK	scl0402747.1_104	NM_207274.1			46402296	NM_207274.1	D630004N19Rik		ILMN_2702519	002600601	S	1593	GTCTGGTCTCCTTGATCTTTGTCTCAGCTCTAGTTCTGTAAAGTGGCTTG										
Mus musculus	MEEBO	ILMN_219758	ILMN_219758	A630019B22	scl45653.1.1_0	NM_183210.1			34147277	NM_183210.1	A630019B22		ILMN_1260276	006280367	S	2531	CTCCCTTACACTGTTGGCAGGTGGTCTGTCCAGCAGCTGAGAAAAGAGAT										
Mus musculus	Riken	ILMN_204277	ILMN_204277	9630015E22RIK	ri|9630015E22|PX00115I20|AK035896|1897					AK035896	9630015E22Rik		ILMN_1230818	003140477	S	1547	TGGGGAAATGTAACCTCAGCTTCTCCCATTCCGGGAACAGGCGGATTGCC										
Mus musculus	RefSeq	ILMN_207515	ILMN_207515	2210408I21RIK	XM_354778.1	XM_354778.1			38075389	XM_354778.1	2210408I21Rik		ILMN_2587929	004920433	I	410	TATGGTAGAGTGGGGAGCAGGGAACATACCTGGATGAGTTACTATATGTG										
Mus musculus	RefSeq	ILMN_215225	ILMN_215225	MET	NM_008591.1	NM_008591.1		17295	6678867	NM_008591.1	Met	NP_032617.1	ILMN_2828877	003800192	S	3932	ACGAAGTGATGCTAAAATGCTGGCACCCCAAAGCGGAAATGCGCCCGTCC	6	+	17521615-17521664	6qA2	Mus musculus met proto-oncogene (Met), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence ISO]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IGI]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IPI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The series of molecular signals generated as a consequence of the hepatocyte growth factor receptor binding to one of its physiological ligands [goid 48012] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51450] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with hepatocye growth factor to initiate a change in cell activity [goid 5008] [evidence IDA]	HGFR; Par4; HGF; c-Met	HGFR; Par4; HGF; c-Met
Mus musculus	RefSeq	ILMN_200412	ILMN_200412	LOC383213	XM_356926.1	XM_356926.1			38081732	XM_356926.1	LOC383213		ILMN_1235187	001050021	S	313	GCATTGCTTACCCTGCAAAGGGAATGGGTGGGAGTGATTTTGTTTGGTGC										
Mus musculus	Riken	ILMN_202910	ILMN_202910	4732433O14RIK	ri|4732433O14|PX00050L12|AK028684|2735					AK028684	4732433O14Rik		ILMN_2553253	004900048	S	2191	GACTTGCCAGGAGTTCATTACAAATCTCCAAGGAGTAAATGAAGGTGGGG										
Mus musculus	RefSeq	ILMN_210561	ILMN_210561	KARS	NM_053092.1	NM_053092.1		85305	16716380	NM_053092.1	Kars	NP_444322.1	ILMN_2606848	003310379	S	1620	TCCCACAGCGGGCTGGGGCATGGGCATTGATCGGCTCACCATGTTTCTCA	8	-	114518783-114518832	8qE1	Mus musculus lysyl-tRNA synthetase (Kars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling lysine to lysyl-tRNA, catalyzed by lysyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6430] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys) [goid 4824] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D8Ertd698e; AA589550; LysRS; D8Wsu108e; AL033315; AL033367; AL024334; mKIAA0070	D8Ertd698e; AA589550; LysRS; D8Wsu108e; AL033315; AL033367; AL024334; mKIAA0070
Mus musculus	MEEBO	ILMN_213345	ILMN_213345	LRRFIP2	scl36411.19_355	XM_284541.1			28546349	XM_284541.1	Lrrfip2		ILMN_2732034	000290022	S	752	GACCTGAAGGACCAGATTCATGATGTAGAAGGGCGGTACATGCAGGGCCT							The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]			
Mus musculus	MEEBO	ILMN_213345	ILMN_213345	LRRFIP2	scl36411.19_355	XM_284541.1			28546349	XM_284541.1	Lrrfip2		ILMN_1258115	000290678	S	3382	CTCTGAGGAGCCCCTGCTTGGCCCTAGCCCTTGTTTTAGTCTATTCAATT							The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]			
Mus musculus	RefSeq	ILMN_197599	ILMN_258100	LOC674083	XM_974132.1	XM_974132.1		674083	94397487	XM_974132.1	LOC674083	XP_979226.1	ILMN_1246224	006620504	S	499	CAGCAGAAAGAACAAGAGGCAGACTCTTCCATACTCGTCTTGACAGGGGC					PREDICTED: Mus musculus similar to T-cell receptor alpha chain V region CTL-L17 precursor (LOC674083), mRNA.					
Mus musculus	RefSeq	ILMN_187890	ILMN_228380	OXA1L	NM_026936.3	NM_026936.3		69089	146141106	NM_026936.3	Oxa1l	NP_081212.1	ILMN_2448002	003800026	S	470	TCTCATTGTGAAGGGCCAGCGAGAAGCAGCCAAGATCCACAACCACATGC				14qC2	Mus musculus oxidase assembly 1-like (Oxa1l), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process by which a protein is incorporated into a biological membrane [goid 51205] [evidence IEA]		1810020M02Rik; AI894287	1810020M02Rik; AI894287
Mus musculus	Riken	ILMN_206131	ILMN_206131	C630030A18RIK	ri|C630030A18|PX00084J11|AK083235|4455					AK083235	C630030A18Rik		ILMN_2577790	003310446	S	4042	CCGATGTCCTTTTGGGCGTAACCAAATGTGGAACCTGCAGACACAGGTGC										
Mus musculus	RefSeq	ILMN_189265	ILMN_249512	GLIS3	NM_175459.5	NM_175459.5		226075	142344155	NM_175459.5	Glis3	NP_780668.3	ILMN_2524917	002000521	S	3270	TCCTCAAGCCTCTTTGGGGAATCTCTTCGCAGTGGCCCTGAAGACCCCAC	19	-	28337535-28337584	19qC1	Mus musculus GLIS family zinc finger 3 (Glis3), mRNA.	Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated [goid 44428] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E230012L24; E330013K21Rik; 4833409N03Rik	E230012L24; E330013K21Rik; 4833409N03Rik
Mus musculus	RefSeq	ILMN_189265	ILMN_249512	GLIS3	NM_175459.5	NM_175459.5		226075	142344155	NM_175459.5	Glis3	NP_780668.3	ILMN_2496419	000070632	S	3723	GGAGAAGACAGCCGAGGTACCAGTGGCAAAGTGTGCCCATGCTCTTTCGT	19	-	28337082-28337131	19qC1	Mus musculus GLIS family zinc finger 3 (Glis3), mRNA.	Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated [goid 44428] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E230012L24; E330013K21Rik; 4833409N03Rik	E230012L24; E330013K21Rik; 4833409N03Rik
Mus musculus	RefSeq	ILMN_188683	ILMN_188683	WBP1	NM_016757.1	NM_016757.1		22377	7949166	NM_016757.1	Wbp1	NP_058037.1	ILMN_2951120	006840706	S	914	TCCTGACTCCAGTGAAGGTGAGCCACTCAAGGAAGCGAGGGCTAGTGCCT	6	-	83085021-83085070	6qC3	Mus musculus WW domain binding protein 1 (Wbp1), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a WW domain of a protein, a small module composed of 40 amino acids and plays a role in mediating protein-protein interactions via proline-rich regions [goid 50699] [evidence IPI]	AI255152	AI255152
Mus musculus	Riken	ILMN_205037	ILMN_205037	H2LS	ri|A530087F01|PX00143L09|AK041171|2170					AK041171	H2ls		ILMN_1227454	001260209	S	1936	GTAATGGCCAGTCTGGGGGACTTTCCAGAGACATAGCAAGCCCTGGGTTG										
Mus musculus	RefSeq	ILMN_224217	ILMN_247817	BSX	NM_178245.3	NM_178245.3		244813	118130559	NM_178245.3	Bsx	NP_839976.1	ILMN_1228573	003180224	S	784	AGGCCGCGGGGCCAGACCGGGTTCTTCCCGGGTGGGAAGACTCGCGGAGA	9	+	40685964-40686013	9qA5.1	Mus musculus brain specific homeobox (Bsx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The tissue remodeling that removes differentiated mammary epithelia during weaning [goid 60056] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	MGC129478; MGC129479	MGC129478; MGC129479
Mus musculus	RefSeq	ILMN_218875	ILMN_243596	UBE2CBP	NM_027394.2	NM_027394.2		70348	141803391	NM_027394.2	Ube2cbp	NP_081670.1	ILMN_2701304	006020577	S	1543	GTGTGAACGCAGCGAGGAACTTCACTGGGGAGCTGAATGTTAACCACTCT	9	-	86201076-86201125	9qE3.1	Mus musculus ubiquitin-conjugating enzyme E2C binding protein (Ube2cbp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MGC144619	MGC144619
Mus musculus	RefSeq	ILMN_210619	ILMN_210619	RPL18	NM_009077.2	NM_009077.2		19899	83699423	NM_009077.2	Rpl18	NP_033103.2	ILMN_2881322	005490390	S	140	TGCGGCTGCTTGTCAAGCTGTACAGGTTTCTGGCCAGACGGACCAACTCC	7	+	52974693-52974709:52974899-52974931	7qB4	Mus musculus ribosomal protein L18 (Rpl18), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	L18; Rpl18a	L18; Rpl18a
Mus musculus	RefSeq	ILMN_214086	ILMN_214086	6430571L13RIK	NM_175486.3	NM_175486.3		235599	146198615	NM_175486.3	6430571L13Rik	NP_780695.1	ILMN_1223546	001470114	S	2394	CATGGGGAGAGGTTCTGGTTTTCTTGCTGCCTCTAGCTGCTATAAATACG				9qF1	Mus musculus RIKEN cDNA 6430571L13 gene (6430571L13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_184596	ILMN_184596	FRMD3	scl25342.16.1_150				27370317	NM_172869	Frmd3		ILMN_1226295	003710288	S	16	CACTTAGCCTCAGACTTCAGGTGCATTGACCCATCCATTAGTAAAGCTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219876	ILMN_219876	OLFR1417	NM_146936.1	NM_146936.1		258938	22129038	NM_146936.1	Olfr1417	NP_667147.1	ILMN_1213096	005090242	S	879	GAGGAACAGAGAACTCAAGGATGCTTTGAGGAAGGTGGTGATAAGCTTCC	19	-	11902586-11902635	19qA	Mus musculus olfactory receptor 1417 (Olfr1417), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR266-2	MOR266-2
Mus musculus	RefSeq	ILMN_243874	ILMN_243874	PSMD14	NM_021526.1	NM_021526.1		59029	10946951	NM_021526.1	Psmd14	NP_067501.1	ILMN_2933914	001430762	S	1032	CCTGAACAGCTGGCAATAAAGAATGTTGGCAAGCAGGATCCCAAACGTCA	2	+	61635475-61635514:61638039-61638048	2qC1.3	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 (Psmd14), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence ISS]		Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence ISS]	AA986732; 2610312C03Rik; Poh1; Pad1; rpm11; 3200001M20Rik	AA986732; 2610312C03Rik; Poh1; Pad1; rpm11; 3200001M20Rik
Mus musculus	RefSeq	ILMN_210632	ILMN_210632	AGXT2L2	NM_028398.1	NM_028398.1		72947	28077014	NM_028398.1	Agxt2l2	NP_082674.1	ILMN_2916008	006250192	S	1353	CCTGAGGATCAAGCACCCCCCAGAAGATACTCATCCTACTCAAATACTCC	11	+	51414102-51414124:51416297-51416323	11qB1.3	Mus musculus alanine-glyoxylate aminotransferase 2-like 2 (Agxt2l2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2900006B13Rik; RP23-79E13.3	2900006B13Rik; RP23-79E13.3
Mus musculus	Riken	ILMN_206914	ILMN_206914	A330097B12RIK	ri|A330097B12|PX00133G12|AK079653|2076					AK079653	A330097B12Rik		ILMN_1248255	006110563	S	1900	GGACTACAGGCCAGATAGCACTGGGACTACAGACCTACACTACCATGGAG										
Mus musculus	RefSeq	ILMN_212514	ILMN_212514	MAGOH	NM_010760.2	NM_010760.2		17149	118130124	NM_010760.2	Magoh	NP_034890.1	ILMN_2627350	003310097	S	488	CTAGATATTGGATATTGTGGACACAAGGCGGGTGGGAGTTTTTAGTTACC	4	+	107559878-107559881:107559882-107559927	4qC7	Mus musculus mago-nashi homolog, proliferation-associated (Drosophila) (Magoh), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence NAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Mago-m	Mago-m
Mus musculus	RefSeq	ILMN_212514	ILMN_212514	MAGOH	NM_010760.2	NM_010760.2		17149	118130124	NM_010760.2	Magoh	NP_034890.1	ILMN_2668114	003400142	S	251	TGAAATCACCAAAGAAGATGATGCTCTGTGGCCCCCTCCTGATCGCGTGG	4	+	107555726-107555775	4qC7	Mus musculus mago-nashi homolog, proliferation-associated (Drosophila) (Magoh), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence NAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Mago-m	Mago-m
Mus musculus	RefSeq	ILMN_214629	ILMN_214629	KRTAP12-1	NM_010670.1	NM_010670.1		16694	6754489	NM_010670.1	Krtap12-1	NP_034800.1	ILMN_2650094	006180647	S	518	CACCAGGTGGGAACCCTACCTGTCCCACCCCGAACCTTGAAGAACAGATT	10	+	77183848-77183897	10qC1	Mus musculus keratin associated protein 12-1 (Krtap12-1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			MGC130277; D10Jhu14e; MGC130278; AI507309; AI586068	MGC130277; D10Jhu14e; MGC130278; AI507309; AI586068
Mus musculus	MEEBO	ILMN_214880	ILMN_214880	FIN15	scl29028.1.1_117	NM_008016.1			6679796	NM_008016.1	Fin15		ILMN_1243704	005270047	S	2130	TCCAAAGCAGCTGAGAAAGGCTTCATAAGACAGCATGAAGGTACACTGGG										
Mus musculus	MEEBO	ILMN_214880	ILMN_214880	FIN15	scl29028.1.1_117	NM_008016.1			6679796	NM_008016.1	Fin15		ILMN_1250335	003440474	S	2679	GCTTTTCTAAGGTAAGCACGGTGGGTTTGTACCACTTGGGCAAACACTAC										
Mus musculus	RefSeq	ILMN_199278	ILMN_199278	LOC235971	XM_142543.1	XM_142543.1			20944908	XM_142543.1	LOC235971		ILMN_1247372	004280242	S	257	CTCATGAATGTAGTCAATGTGGGAAAGCCTTTGCAGGACCCACTCATCTC										
Mus musculus	MEEBO	ILMN_213519	ILMN_213519	HOXA13	scl015398.2_0				6680244	NM_008264	Hoxa13		ILMN_1237317	004070537	S	936	GGCTCTGCCCAACGGCTGGAACGGCCAAATGTACTGCCCCAAAGAGCAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway [goid 30510] [evidence IMP]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218001	ILMN_218001	PLEC1	NM_201386.1	NM_201386.1		18810	41322920	NM_201386.1	Plec1	NP_958788.1	ILMN_2690359	007320520	S	148	GTGAAGACATGGACCCCTCAAGAGCCATCCAGCACGAGATCAGCTCCCTC	15	-	76039398-76039440:76039441-76039447	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; AA591047; AU042537; PLTN; PCN	EBS1; AA591047; AU042537; PLTN; PCN
Mus musculus	RefSeq	ILMN_216109	ILMN_253345	OCEL1	NM_029865.1	NM_029865.1		77090	58037486	NM_029865.1	Ocel1	NP_084141.1	ILMN_2667463	002370400	S	592	AAGCATCCCAGAGATCTGGGACCCCGCCTCAACCCAGTACCTGACTACGA	8	+	73895844-73895884:73896367-73896375	8qB3.3	Mus musculus occludin/ELL domain containing 1 (Ocel1), mRNA.				AI593544; 9430098E02Rik	AI593544; 9430098E02Rik
Mus musculus	RefSeq	ILMN_197197	ILMN_255815	GM806	NM_001033400.2	NM_001033400.2		328250	142374348	NM_001033400.2	Gm806	NP_001028572.1	ILMN_1224229	006350152	S	880	CACCATGAATGTGGAGGAGGGCCTATGGAGGGGTCTGCAGGAATGGCAGT	13	+	50566403-50566452	13qA5	Mus musculus gene model 806, (NCBI) (Gm806), mRNA.					
Mus musculus	RefSeq	ILMN_239601	ILMN_239601	KLK1B22	NM_010114.1	NM_010114.1		13646	52693912	NM_010114.1	Klk1b22	NP_034244.1	ILMN_2946653	006040431	S	526	CCAGTGTGTGTCCATCAAGCTCCATCCTAATGAGGTCTGTGTGAAAGCCC	7	+	51371598-51371647	7qB4	Mus musculus kallikrein 1-related peptidase b22 (Klk1b22), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Klk22; Egfbp-1; MGC118112; mGk-22; Egfbp1	Klk22; Egfbp-1; MGC118112; mGk-22; Egfbp1
Mus musculus	RefSeq	ILMN_201220	ILMN_201220	LOC384936	XM_357947.1	XM_357947.1			38089924	XM_357947.1	LOC384936		ILMN_2541515	007000400	S	376	ATGCTGGCGTTTCAGTCAGGTCCATCCAAGCATCAGAAGGCGTGGCCCGG										
Mus musculus	MEEBO	ILMN_194472	ILMN_194472	9430052C07RIK	scl7144.1.1_67						9430052C07Rik		ILMN_2506727	006180739	S	11	GGCATGTAAAGGACTGTTGGAAAACGGAGTGTGGGTGAAATCGTGCTGCT										
Mus musculus	MEEBO	ILMN_195105	ILMN_195105	D130086K05RIK	scl00319882.1_22						D130086K05Rik		ILMN_2512636	004200014	S	20	GTATTAGGATTCAGCCTCAGCCATCAGATGTGGAATCAACTGTCCTTAGC										
Mus musculus	RefSeq	ILMN_199000	ILMN_313383	LOC667303	XR_031775.1	XR_031775.1		667303	149260669	XR_031775.1	LOC667303		ILMN_2533694	001260682	S	529	GAGAAGAAAGCTGCCAAGCTGAAGGAGAAGTACAAGAAGGATATTGCTGC	10	-	22172838-22172887	10qA3	PREDICTED: Mus musculus similar to high-mobility group box 1 (LOC667303), misc RNA.					
Mus musculus	MEEBO	ILMN_185472	ILMN_185472	MARK3	scl42746.1.1_82				12313870	NM_021516	Mark3		ILMN_2598692	004290088	S	2460	CGCCTGGGAGCGAAGGCTGGCCTTCTCTACGAATGCACTACATTAAAGTC							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185472	ILMN_185472	MARK3	scl42746.1.1_82				12313870	NM_021516	Mark3		ILMN_1237478	000540561	S	8	GAAAAGCAGACTACCTCTACACACAACTTGGATATATGTCAAGGGACTGG							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214061	ILMN_214061	PPM1G	NM_008014.3	NM_008014.3		14208	118131027	NM_008014.3	Ppm1g	NP_032040.1	ILMN_2643832	003370546	S	1351	CCCCAGGAACAGATGATTTCTGCCCTTCCTGACATCAAGGTGCTGACTCT	5	-	31506447-31506496	5qB1	Mus musculus protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform (Ppm1g), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]	Fin13; AI385652	Fin13; AI385652
Mus musculus	RefSeq	ILMN_189879	ILMN_237944	WWTR1	NM_133784.2	NM_133784.2		97064	84370279	NM_133784.2	Wwtr1	NP_598545.2	ILMN_2732998	001010204	S	767	CTGAATCATGTGAACCTCCACCCGTCCATCACTTCCACCTCGGTGCCACA	3	-	57305685-57305734	3qD	Mus musculus WW domain containing transcription regulator 1 (Wwtr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of adipocyte differentiation [goid 45599] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IGI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]	2310058J06Rik; TAZ; C78399; 2610021I22Rik	2310058J06Rik; TAZ; C78399; 2610021I22Rik
Mus musculus	RefSeq	ILMN_189879	ILMN_237944	WWTR1	NM_133784.2	NM_133784.2		97064	84370279	NM_133784.2	Wwtr1	NP_598545.2	ILMN_1219016	007560563	S	4643	GCCGCCAAATCCATCAGATGAAACCATTTTATCTAGAGTCTGGTACAGGG	3	-	57259623-57259672	3qD	Mus musculus WW domain containing transcription regulator 1 (Wwtr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of adipocyte differentiation [goid 45599] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IGI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]	2310058J06Rik; TAZ; C78399; 2610021I22Rik	2310058J06Rik; TAZ; C78399; 2610021I22Rik
Mus musculus	Riken	ILMN_203257	ILMN_203257	8030462N17RIK	ri|8030462N17|PX00103H11|AK033209|1535					AK033209	8030462N17Rik		ILMN_1235237	003180274	S	1430	CCTCAGGACTAGGCACCTTGCTTTATTATCTAGCCTCTGCACTTGAGCTT										
Mus musculus	MEEBO	ILMN_193933	ILMN_193933	KLHDC4	scl34235.11_51				21704209	NM_145605	Klhdc4		ILMN_2501783	001070075	S	12	GACTGCACCCAGAACCCCGTGTGGGTTATGCTTTGTCAGAATCCCAGGAG										
Mus musculus	MEEBO	ILMN_192084	ILMN_192084	3110035F07RIK	scl45978.1.1_9						3110035F07Rik		ILMN_2484845	003060437	S	2	ATGAAAGGAAAATCTCTGATTTGAGTTCTAATGAAAGATCCCATGATACT										
Mus musculus	Riken	ILMN_204991	ILMN_204991	9330160M17RIK	ri|9330160M17|PX00105D16|AK034165|4777					AK034165	9330160M17Rik		ILMN_1241033	001770093	S	4449	GGTTAGAAAGGTCCAGTTTCACACCTCCCAACCCTTCAGACAGCATTCAC										
Mus musculus	Riken	ILMN_207000	ILMN_207000	ALDH3A2	ri|6430532N15|PX00648M24|AK078243|2852					AK078243	Aldh3a2		ILMN_2584281	002000070	S	2519	GCTTTCTGGGAGCTGTGCCTTCCACGCATGGTTACAGAGTTGAAACAAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213724	ILMN_213724	MIOX	NM_019977.2	NM_019977.2		56727	45504404	NM_019977.2	Miox	NP_064361.2	ILMN_2640116	003850349	S	810	CCTACCGGATGTGGAGAGCCTGCGGCCCTACTATCAAGGGCTGATTGACA	15	+	89167201-89167250	15qE3	Mus musculus myo-inositol oxygenase (Miox), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the NADPH-dependent reduction of carbonyl compounds [goid 4033] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence TAS]; Catalysis of the reaction: myo-inositol + O2 = D-glucuronate + H2O [goid 50113] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IDA]	Aldrl6; AI314022; RSOR; 0610009I10Rik; C85427	Aldrl6; AI314022; RSOR; 0610009I10Rik; C85427
Mus musculus	RefSeq	ILMN_214362	ILMN_214362	RASD1	NM_009026.1	NM_009026.1		19416	6677672	NM_009026.1	Rasd1	NP_033052.1	ILMN_2647197	002570273	S	1291	CTGTCCTGCTCGCTTCAGGGCAGGACTAATAATAGGGCATTATCTTGTCT	11	-	59779644-59779693	11qB1.3	Mus musculus RAS, dexamethasone-induced 1 (Rasd1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Dexras1	Dexras1
Mus musculus	RefSeq	ILMN_216936	ILMN_216936	THEG	NM_199226.1	NM_199226.1		21830	40548367	NM_199226.1	Theg	NP_954696.1	ILMN_3100258	004060672	A	868	CCGCCTTCTTCAGCTGGCAACACCCAAGGCCCTGTCAGAAAAGTGCGTTC	10	-	79039481-79039511:79042684-79042702	10qC1	Mus musculus testicular haploid expressed gene (Theg), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_186803	ILMN_186803	D930033H10RIK	scl52703.1_639						D930033H10Rik		ILMN_2438626	005290040	S	19	AGTTCATTGTCTTTAATTAGACAGCGTCTTGCATATCTTGCTGTGGGGGG										
Mus musculus	MEEBO	ILMN_221802	ILMN_221802	DNCHC2	scl00110350.1_296	XM_358380.1			38089700	XM_358380.1	Dnchc2		ILMN_2740533	004230328	S	4270	ACAAGGGCTCCAGGATATGGCCAAAGAAGATTGGATTACTTACCGGGCTA										
Mus musculus	RefSeq	ILMN_220868	ILMN_220868	OLFR368	NM_146374.1	NM_146374.1		258371	22129556	NM_146374.1	Olfr368	NP_666486.1	ILMN_1218591	007570309	S	648	GGCTATTGCTGTGTCTTATGGATTCATCGCTGTTGCTGTGATCCGCATGC	2	+	37187916-37187965	2qB	Mus musculus olfactory receptor 368 (Olfr368), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR178-1; MGC129260	MOR178-1; MGC129260
Mus musculus	RefSeq	ILMN_199940	ILMN_199940	LOC381586	XM_355546.1	XM_355546.1			38079091	XM_355546.1	LOC381586		ILMN_1252685	003290528	S	3418	GATGGTCATGTACAGTTCAGGTGGGCGTGTGCACAGGCGTGGCTTCTGTA										
Mus musculus	RefSeq	ILMN_221509	ILMN_313817	LOC100047490	XM_001478266.1	XM_001478266.1		100047490	149254375	XM_001478266.1	LOC100047490	XP_001478316.1	ILMN_2736530	001300372	S	858	CCATCCTGAGGCTGTAGATCTCAGTTCTGTGTTTACTGTGAGCCCATCAC					PREDICTED: Mus musculus similar to putative oral cancer suppressor (LOC100047490), mRNA.					
Mus musculus	RefSeq	ILMN_198058	ILMN_198058	LOC277837	XM_204184.2	XM_204184.2			38081149	XM_204184.2	LOC277837		ILMN_1239725	006660091	S	2424	CCTAGCCAAATGGATGGACTTGGAGGGCATCATCCTGAGTGAGGCAACAC										
Mus musculus	RefSeq	ILMN_210821	ILMN_210821	2610510J17RIK	NM_028131.1	NM_028131.1		72155	21312391	NM_028131.1	2610510J17Rik	NP_082407.1	ILMN_2897468	007650195	S	1581	CCCCAAACTAGGAGAGTCAGAGGGAAGCTGGAGGCTACTACGCAAGGCTG	8	+	119827293-119827342	8qE1	Mus musculus RIKEN cDNA 2610510J17 gene (2610510J17Rik), mRNA.				AI426416; AW545024	AI426416; AW545024
Mus musculus	RefSeq	ILMN_214782	ILMN_214782	OSBPL3	NM_027881.2	NM_027881.2		71720	141802870	NM_027881.2	Osbpl3	NP_082157.1	ILMN_1214190	007400452	S	1274	TCTTAAAGAACGCTTACGCAGAATCCATGCGGAATCTCTGCTCCTCGACC	6	-	50283222-50283271	6qB2.3	Mus musculus oxysterol binding protein-like 3 (Osbpl3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6720421I08Rik; ORP3; 1200014M06Rik; MGC102333; OSBP3; A530055M08	6720421I08Rik; ORP3; 1200014M06Rik; MGC102333; OSBP3; A530055M08
Mus musculus	RefSeq	ILMN_214782	ILMN_214782	OSBPL3	NM_027881.2	NM_027881.2		71720	141802870	NM_027881.2	Osbpl3	NP_082157.1	ILMN_2656021	007560114	S	2669	CAGTGACGATGCTTGGGTAAGCAATGGGACCTACCTGGAACTGAGGAAAG	6	-	50247104-50247153	6qB2.3	Mus musculus oxysterol binding protein-like 3 (Osbpl3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6720421I08Rik; ORP3; 1200014M06Rik; MGC102333; OSBP3; A530055M08	6720421I08Rik; ORP3; 1200014M06Rik; MGC102333; OSBP3; A530055M08
Mus musculus	MEEBO	ILMN_191113	ILMN_191113	SCL0001375.1_63	scl0001375.1_63	L38990.1			886343	L38990.1	scl0001375.1_63		ILMN_2476224	006980133	S	3	GGTGGGGAGGGGTCCAGAAGTGAACAATGAAAAAGAGGAAGCTGTGGCTT										
Mus musculus	RefSeq	ILMN_214489	ILMN_250135	LRRC38	XM_915579.2	XM_915579.2		242735	94372705	XM_915579.2	Lrrc38	XP_920672.1	ILMN_2648524	006900167	S	1847	TCCCCTGTGTTGCTGCAATGATATCTCACACCCAACGTGATGAACGTGGG				4qE1	PREDICTED: Mus musculus leucine rich repeat containing 38 (Lrrc38), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222661	ILMN_222661	ZFAND3	NM_148926.2	NM_148926.2		21769	54020733	NM_148926.2	Zfand3	NP_683728.1	ILMN_2753096	001410242	S	2483	CCTTTGTGTCCTAGATTGACTTACACACATAGCCTAGAGCTCAGTTTTAG	17	+	30346831-30346880	17qA3.3	Mus musculus zinc finger, AN1-type domain 3 (Zfand3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC103362; TEG-27; MGC118625; AW539211; Tex27	MGC103362; TEG-27; MGC118625; AW539211; Tex27
Mus musculus	RefSeq	ILMN_219829	ILMN_219829	OLFR1261	NM_146474.1	NM_146474.1		258466	27883863	NM_146474.1	Olfr1261	NP_666685.1	ILMN_1247051	006100066	S	447	CCATGGAGGGATACAGATTTTGTTTATGGCCCAGTTACCATTCTGTGGCC	2	+	89833998-89834047	2qE1	Mus musculus olfactory receptor 1261 (Olfr1261), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR234-3	MOR234-3
Mus musculus	RefSeq	ILMN_186606	ILMN_237210	4930429H19RIK	XM_980182.1	XM_980182.1		73897	94380675	XM_980182.1	4930429H19Rik	XP_985276.1	ILMN_1245985	001430484	S	385	GGTGAAAAGTCGATTTGTAAATGGTGACGGACTCTATAAACATGGGGAGT				7qD1	PREDICTED: Mus musculus RIKEN cDNA 4930429H19 gene (4930429H19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_184388	ILMN_184388	ZBED4	NM_181412.3	NM_181412.3		223773	114326492	NM_181412.3	Zbed4	NP_852077.1	ILMN_2418222	006370369	S	5298	GCCTGGACTGTGCTTTAGTGTATTTATAAATGACGAACCTGGATTCTGAA	15	+	88614870-88614919	15qE3	Mus musculus zinc finger, BED domain containing 4 (Zbed4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700009F06Rik; MGC59429	1700009F06Rik; MGC59429
Mus musculus	RefSeq	ILMN_222130	ILMN_222130	1700094C09RIK	NM_024279.2	NM_024279.2		78634	142361666	NM_024279.2	1700094C09Rik	NP_077241.1	ILMN_1242313	003850128	S	689	GCTCCATGCCACCCATCTTAGGGAATGCACACACTCACTGTTACTGGTTC	8	+	12600666-12600715	8qA1.1	Mus musculus RIKEN cDNA 1700094C09 gene (1700094C09Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC58425	MGC58425
Mus musculus	RefSeq	ILMN_202233	ILMN_216290	HOPX	NM_175606.2	NM_175606.2		74318	31559868	NM_175606.2	Hopx	NP_783199.1	ILMN_2548010	004830612	S	587	TGTTTCAGTGCAGTGTTGAATGTCTCATTGTTTTGCTGTCCTGCTATTTA	5	-	77516639-77516688	5qC3.3	Mus musculus HOP homeobox (Hopx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increase the rate of skeletal muscle regeneration [goid 43415] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence ISO]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence ISO]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Obl; AW490897; Hdop; Cameo; 1200015P04Rik; Hop; AI848177; 1110018K11Rik; Toto; Ob1; 2300002F06Rik	Obl; AW490897; Hdop; Cameo; 1200015P04Rik; Hop; AI848177; 1110018K11Rik; Toto; Ob1; 2300002F06Rik
Mus musculus	RefSeq	ILMN_216290	ILMN_216290	HOPX	NM_175606.2	NM_175606.2		74318	31559868	NM_175606.2	Hopx	NP_783199.1	ILMN_2669426	006860681	S	1151	TAGAATTTACCTTATTTAAATGAACTTGTTAAATTTATTTTGCTGAATAA	5	-	77516075-77516124	5qC3.3	Mus musculus HOP homeobox (Hopx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increase the rate of skeletal muscle regeneration [goid 43415] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence ISO]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence ISO]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IGI]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Obl; AW490897; Hdop; Cameo; 1200015P04Rik; Hop; AI848177; 1110018K11Rik; Toto; Ob1; 2300002F06Rik	Obl; AW490897; Hdop; Cameo; 1200015P04Rik; Hop; AI848177; 1110018K11Rik; Toto; Ob1; 2300002F06Rik
Mus musculus	RefSeq	ILMN_217912	ILMN_318396	COL6A3	NM_009935.1	NM_009935.1		12835	31791060	NM_009935.1	Col6a3	NP_034065.1	ILMN_2689207	007210392	S	5838	CGGGGATCACACCCTTGTTCCTTACAAGCCAGGAGGACCGACAGCTCATC				1qD	Mus musculus procollagen, type VI, alpha 3 (Col6a3), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]			Col6a-3; AI507288	Col6a-3; AI507288
Mus musculus	RefSeq	ILMN_217912	ILMN_318396	COL6A3	NM_009935.1	NM_009935.1		12835	31791060	NM_009935.1	Col6a3	NP_034065.1	ILMN_2716023	001980343	S	4463	GTGAATGGCACACAAGGTTTCCAGGGCTGTCCAGGCCAGAGGGGAGTGAA				1qD	Mus musculus procollagen, type VI, alpha 3 (Col6a3), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]			Col6a-3; AI507288	Col6a-3; AI507288
Mus musculus	RefSeq	ILMN_217912	ILMN_318396	COL6A3	NM_009935.1	NM_009935.1		12835	31791060	NM_009935.1	Col6a3	NP_034065.1	ILMN_1249220	005810598	S	8547	TAGAAGAAATCAGACCTCTTTCCTGTGTGCATTGCTGGGACAAATGCCTC				1qD	Mus musculus procollagen, type VI, alpha 3 (Col6a3), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]			Col6a-3; AI507288	Col6a-3; AI507288
Mus musculus	Riken	ILMN_206745	ILMN_206745	D330014H01RIK	ri|D330014H01|PX00191E20|AK084552|4211					AK084552	D330014H01Rik		ILMN_1233826	001690136	S	4047	AGGCCAAGTCAGAGGGAGGGCAGAATCGAAGGCTCCCCAGAAACGTGAGT										
Mus musculus	RefSeq	ILMN_196642	ILMN_261313	COL24A1	NM_027770.2	NM_027770.2		71355	116326000	NM_027770.2	Col24a1	NP_082046.2	ILMN_1253468	007380646	S	5553	TCACTGTCTAAACACCCCAAGGTGGAGCAGCACATGGGCGGATGGTCCAG	3	+	145208128-145208177	3qH2	Mus musculus collagen, type XXIV, alpha 1 (Col24a1), mRNA. XM_916101	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5430404K19Rik; MGC107332	5430404K19Rik; MGC107332
Mus musculus	RefSeq	ILMN_194119	ILMN_261313	COL24A1	NM_027770.2	NM_027770.2		71355	116326000	NM_027770.2	Col24a1	NP_082046.2	ILMN_1231275	006770427	S	7054	AGCCTGTTGTTCATCTGTTACAAGCATACTGTTAACCTCAGCGAACCACA	3	+	145214886-145214935	3qH2	Mus musculus collagen, type XXIV, alpha 1 (Col24a1), mRNA. XM_916101	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5430404K19Rik; MGC107332	5430404K19Rik; MGC107332
Mus musculus	RefSeq	ILMN_261313	ILMN_261313	COL24A1	NM_027770.2	NM_027770.2		71355	116326000	NM_027770.2	Col24a1	NP_082046.2	ILMN_2857666	002260192	S	6650	CAGGCCACCTAAATCCAGTGGTAGGTTTGGATTAGAAACTGGTGTTTGTG	3	+	145214482-145214531	3qH2	Mus musculus collagen, type XXIV, alpha 1 (Col24a1), mRNA. XM_916101	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5430404K19Rik; MGC107332	5430404K19Rik; MGC107332
Mus musculus	Riken	ILMN_203514	ILMN_203514	GABRG1	ri|9330154P21|PX00105K11|AK034085|3508					AK034085	Gabrg1		ILMN_1245521	001090601	S	877	TGCAGTACCTGCTAGAACATCCCTGGCACTCATGGAATACGGAACCTTGC						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199735	ILMN_199735	LOC382935	XM_356758.1	XM_356758.1			38076666	XM_356758.1	LOC382935		ILMN_2536293	002060537	S	219	GGTCGACAACGTCGACTTGGCTGTCAATTTCTTGGCGTCCTTTCTAAATA										
Mus musculus	RefSeq	ILMN_245146	ILMN_245146	MCART6	NM_001082412.1	NM_001082412.1		67062	126723222	NM_001082412.1	Mcart6	NP_001075881.1	ILMN_2822732	004280674	S	1459	CCAAGCCTGTGGGCCTCTGCCCAAGATGTGTGGGACACTCGAGGTAGAAA	X	-	133517335-133517384	XqF1	Mus musculus mitochondrial carrier triple repeat 6 (Mcart6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AI448995; 2810402A17Rik; AI841128; Mcart6; 2310046F18Rik	AI448995; 2810402A17Rik; AI841128; Mcart6; 2310046F18Rik
Mus musculus	RefSeq	ILMN_186591	ILMN_245146	MCART6	NM_001082412.1	NM_001082412.1		67062	126723222	NM_001082412.1	Mcart6	NP_001075881.1	ILMN_1257486	002710392	S	606	TACCTGCTGTGGGAGCCATGTGCCGCTGTACCTGCTGTGGGAGCCATGTA	X	-	133549823-133549872	XqF1	Mus musculus mitochondrial carrier triple repeat 6 (Mcart6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AI448995; 2810402A17Rik; AI841128; Mcart6; 2310046F18Rik	AI448995; 2810402A17Rik; AI841128; Mcart6; 2310046F18Rik
Mus musculus	Riken	ILMN_202443	ILMN_202443	TAC1	ri|4930432H04|PX00030B01|AK015286|1978					AK015286	Tac1		ILMN_1219905	004290255	S	1800	CAATGTGAAACCCCAGCAGAAAATACAGAACCAGGAGAGGAGCTGGCCCC						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor [goid 7217] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]			
Mus musculus	RefSeq	ILMN_200781	ILMN_233143	LOC385323	XM_975989.1	XM_975989.1		385323	94408615	XM_975989.1	LOC385323	XP_981083.1	ILMN_2539981	005390452	S	120	CAACCAGCTCCTTGATGATAGAAAAACTCCGGGCAAGTGTGGCTTCACTG				XqA1.1	PREDICTED: Mus musculus similar to transcription elongation factor B (SIII), polypeptide 2 (LOC385323), mRNA.					
Mus musculus	RefSeq	ILMN_221887	ILMN_221887	TMEM130	NM_177735.4	NM_177735.4		243339	118130473	NM_177735.4	Tmem130	NP_808403.2	ILMN_2741629	003420091	S	2593	GATGATCAAGTCTGGGAAGGTAGATCTCGTGTCACTGTAACTGTTGGCCC	5	-	145496875-145496924	5qG2	Mus musculus transmembrane protein 130 (Tmem130), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BC067004; MGC157450; MGC157451; C130036G08	BC067004; MGC157450; MGC157451; C130036G08
Mus musculus	Riken	ILMN_204645	ILMN_204645	4631410M14RIK	ri|4631410M14|PX00102C15|AK028460|2451					AK028460	4631410M14Rik		ILMN_1249239	005870519	S	2175	GGCTTTAGGTAACCACACGTAGTCCAGGGAAGAGGGAGCGATGCTTGTCC										
Mus musculus	RefSeq	ILMN_222459	ILMN_222459	GTF2E2	NM_026584.2	NM_026584.2		68153	31980884	NM_026584.2	Gtf2e2	NP_080860.2	ILMN_2749847	002320392	S	1003	ACACGCAGTCGAGATCTTTCTTGATGCTTGGGATCTCAAGACTGTCTGCC	8	+	34887073-34887122	8qA4	Mus musculus general transcription factor II E, polypeptide 2 (beta subunit) (Gtf2e2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH [goid 5673] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	34kDa; C330006J08Rik; AI462509	34kDa; C330006J08Rik; AI462509
Mus musculus	RefSeq	ILMN_222459	ILMN_222459	GTF2E2	NM_026584.2	NM_026584.2		68153	31980884	NM_026584.2	Gtf2e2	NP_080860.2	ILMN_2817371	004290601	S	1267	CCATGTTTTCTCTATTCGTTTAGAAGAAGTTGGAGGATGGTGCTGAATGC	8	+	34887337-34887386	8qA4	Mus musculus general transcription factor II E, polypeptide 2 (beta subunit) (Gtf2e2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH [goid 5673] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	34kDa; C330006J08Rik; AI462509	34kDa; C330006J08Rik; AI462509
Mus musculus	RefSeq	ILMN_198742	ILMN_230088	LOC669900	XM_977859.1	XM_977859.1		669900	94409016	XM_977859.1	LOC669900	XP_982953.1	ILMN_1250153	007400681	S	915	CTCTCAGGTTCCTAACAGTGATCCTCCATCCTATGAGTTCCAGTGGGGCC					PREDICTED: Mus musculus similar to melanoma antigen family B, 4 (LOC669900), mRNA.					
Mus musculus	RefSeq	ILMN_221795	ILMN_221795	PITPNA	NM_008850.1	NM_008850.1		18738	6679336	NM_008850.1	Pitpna	NP_032876.1	ILMN_1221611	005050228	S	3399	CCCCCCTGGACCTCTGACGTCCTTGGGTTGGTTCTTAGTGCTACTTCTTT	11	+	75436106-75436155	11qB5	Mus musculus phosphatidylinositol transfer protein, alpha (Pitpna), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence ISS]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence ISO]	Pitpn; vb; vibrator	Pitpn; vb; vibrator
Mus musculus	Riken	ILMN_202803	ILMN_202803	1300013D05RIK	ri|5330439L06|PX00054N04|AK030628|1840					AK030628	1300013D05Rik		ILMN_2552416	007000059	S	1574	GCCAGGCCTACTGCAGACTCACACCTGTCATCCAAATGCTGGCACTGAAG										
Mus musculus	RefSeq	ILMN_216209	ILMN_216209	DARS	NM_177445.3	NM_177445.3		226414	142363909	NM_177445.3	Dars	NP_803228.1	ILMN_2668488	003850669	S	1794	TAAAATAGGAAATACTTGAACGTTTTAATGAGAAATTTCTATGGTTGAAA	1	-	130260594-130260643	1qE4	Mus musculus aspartyl-tRNA synthetase (Dars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6422] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp) [goid 4815] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	5730439G15Rik	5730439G15Rik
Mus musculus	RefSeq	ILMN_187639	ILMN_187639	ZFP238	NM_013915.3	NM_013915.3		30928	59889573	NM_013915.3	Zfp238	NP_038943.3	ILMN_2450147	007380193	S	1125	GTGTGGCTTGGGAGTCCTTGGGGTGTGAGCCTGATTTAAAATTCAGACAT	1	+	179377076-179377125	1qH4	Mus musculus zinc finger protein 238 (Zfp238), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP58	RP58
Mus musculus	RefSeq	ILMN_187639	ILMN_187639	ZFP238	NM_013915.3	NM_013915.3		30928	59889573	NM_013915.3	Zfp238	NP_038943.3	ILMN_2459155	001690500	S	4737	GGTCATTGTGAGTGATTGCTCTTTCTTTTACTTAGTTTCACATTCTTCCT	1	+	179380688-179380737	1qH4	Mus musculus zinc finger protein 238 (Zfp238), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP58	RP58
Mus musculus	RefSeq	ILMN_187639	ILMN_187639	ZFP238	NM_013915.3	NM_013915.3		30928	59889573	NM_013915.3	Zfp238	NP_038943.3	ILMN_2445848	004590180	S	3383	GTGTGGCAACTTCTGGTTTTCTGATGGTCCCCAGTGAGAGAAATCTGACA	1	+	179379334-179379383	1qH4	Mus musculus zinc finger protein 238 (Zfp238), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP58	RP58
Mus musculus	RefSeq	ILMN_216828	ILMN_216828	ARHGDIB	NM_007486.1	NM_007486.1		11857	33563235	NM_007486.1	Arhgdib	NP_031512.1	ILMN_2789948	001090180	S	843	CTTACCCCATCTCTCAGAGTGTTCCCTGCAAATGAGACTTAAAACCCTGG	6	-	136888112-136888161	6qG1	Mus musculus Rho, GDP dissociation inhibitor (GDI) beta (Arhgdib), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]	Ly-GDI; Gdid4; D4	Ly-GDI; Gdid4; D4
Mus musculus	RefSeq	ILMN_244678	ILMN_244678	RASL12	NM_001033158.1	NM_001033158.1		70784	75677525	NM_001033158.1	Rasl12	NP_001028330.1	ILMN_2836749	001820037	S	2278	TGCAAGCCCCTAGTGTGTGCTTTGTAGACACCATCATCTGAACCCAGGAC	9	+	65260413-65260462	9qC	Mus musculus RAS-like, family 12 (Rasl12), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4631404I11Rik	4631404I11Rik
Mus musculus	RefSeq	ILMN_191577	ILMN_244678	RASL12	NM_001033158.1	NM_001033158.1		70784	75677525	NM_001033158.1	Rasl12	NP_001028330.1	ILMN_1214307	005890414	S	862	GCTGATGCTTGGGGCTGCAGGGAATGGGCTGTGTTGCACTCTGATGAACC	9	+	65258997-65259046	9qC	Mus musculus RAS-like, family 12 (Rasl12), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4631404I11Rik	4631404I11Rik
Mus musculus	RefSeq	ILMN_217996	ILMN_217996	INSIG2	NM_133748.1	NM_133748.1		72999	19526953	NM_133748.1	Insig2	NP_598509.1	ILMN_2690256	007510356	S	1901	ACGCCTGCCATGTATTTATGGGTTAAGTCGATCAGCTGACTCTCCGCTCG	1	-	123201414-123201463	1qE2.3	Mus musculus insulin induced gene 2 (Insig2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating deprivation of sterols. Sterols are a group of steroids characterized by the presence of one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 6991] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2900053I11Rik; C730043J18Rik; Insig-2	2900053I11Rik; C730043J18Rik; Insig-2
Mus musculus	MEEBO	ILMN_215206	ILMN_215206	MGAT5	scl17537.20.1_25	NM_145128.2			46047860	NM_145128.2	Mgat5		ILMN_2656755	003360136	S	3153	GGCACATAACCTTGGTGGGGAAATAAATGCCTGTGGTGTCCTGAGGGCCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl,1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-(N-acetyl-beta-D-glucosaminyl-1,6)-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R. Only branched mannose glycopeptides with non-reducing N-acetylglucosamine terminal residues act as acceptors [goid 30144] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IMP]		
Mus musculus	RefSeq	ILMN_192473	ILMN_226228	LRRTM4	NM_178731.3	NM_178731.3		243499	141802856	NM_178731.3	Lrrtm4	NP_848846.1	ILMN_2611687	007550064	S	4285	CAGGGCCAAGAAAAGAGGCATGTATTTTCCAAAATTAGTATTCTAACAGT	6	+	79975753-79975802	6qC3	Mus musculus leucine rich repeat transmembrane neuronal 4 (Lrrtm4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	7530419J18Rik; A230052N11	7530419J18Rik; A230052N11
Mus musculus	RefSeq	ILMN_198428	ILMN_245607	LOC435912	XR_003280.1	XR_003280.1		435912	94378912	XR_003280.1	LOC435912		ILMN_1223720	005490653	S	854	TGCCTGTGGTATGCTGAGTACCGCTTTCCCAAGGAGCTCACCCAGACGTA				6qD2	PREDICTED: Mus musculus similar to Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma) (LOC435912), mRNA.					
Mus musculus	RefSeq	ILMN_197412	ILMN_197412	LOC381419	XM_355382.1	XM_355382.1			38075644	XM_355382.1	LOC381419		ILMN_1220288	005700403	S	465	CGGGATATACTGCCCAAGCCTCACAGCATGAACAGTGTGGCAATGGCTGG										
Mus musculus	RefSeq	ILMN_217281	ILMN_217281	ANAPC7	NM_019805.2	NM_019805.2		56317	31980981	NM_019805.2	Anapc7	NP_062779.2	ILMN_2870688	001430091	S	2153	ACTGCAGAGCAGCACTTGGCCCCAGTGGGCAGATCTGAGGAGCAGATGAT	5	+	122704968-122705017	5qF	Mus musculus anaphase promoting complex subunit 7 (Anapc7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	APC7; AW545589	APC7; AW545589
Mus musculus	RefSeq	ILMN_217240	ILMN_217240	ODZ3	NM_011857.2	NM_011857.2		23965	7657416	NM_011857.2	Odz3	NP_035987.2	ILMN_2741231	004010524	S	8212	CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCC	8	-	49313735-49313784	8qB1.2	Mus musculus odd Oz/ten-m homolog 3 (Drosophila) (Odz3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		2610100B16Rik; Odz1; Ten-m3; mKIAA1455	2610100B16Rik; Odz1; Ten-m3; mKIAA1455
Mus musculus	RefSeq	ILMN_217240	ILMN_217240	ODZ3	NM_011857.2	NM_011857.2		23965	7657416	NM_011857.2	Odz3	NP_035987.2	ILMN_1231794	001170274	S	8715	CGGCGGGGATTTAATAATGGATTTTACTAACATGGCTTGCCCTGGGAGGG	8	-	49313232-49313281	8qB1.2	Mus musculus odd Oz/ten-m homolog 3 (Drosophila) (Odz3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		2610100B16Rik; Odz1; Ten-m3; mKIAA1455	2610100B16Rik; Odz1; Ten-m3; mKIAA1455
Mus musculus	Riken	ILMN_201690	ILMN_201690	2610029J22RIK	ri|2610029J22|ZX00034M23|AK011615|1095					AK011615	2610029J22Rik		ILMN_2543809	002970274	S	939	GGAGTCTCACAGCTGCCTCCAGGGGAGCTCTAGGTGGCTTAAATACTTGC										
Mus musculus	RefSeq	ILMN_218069	ILMN_218069	NOTCH1	NM_008714.2	NM_008714.2		18128	31543331	NM_008714.2	Notch1	NP_032740.2	ILMN_1241915	006450022	S	9087	CTGTGCCATGCCTAATAGATATGACCAGACGCATCCTAAGATGTTGATTC	2	-	26313589-26313638	2qA3	Mus musculus Notch gene homolog 1 (Drosophila) (Notch1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; The regionalization process by which embryonic segments are divided into compartments that will result in differences in cell differentiation [goid 7386] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IC ]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process by which the anatomical structures of the foregut are generated and organized. Morphogenesis pertains to the creation of form [goid 7440] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of photoreceptor cell differentiation [goid 46533] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of keratinocyte differentiation [goid 45618] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of keratinocyte differentiation [goid 45618] [evidence IDA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]; Any process that modulates the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50767] [evidence IMP]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IMP]; The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence IDA]; The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence IGI]; Any process that modulates the frequency, rate or extent of epithelial cell proliferation [goid 50678] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IGI]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The extension of new blood vessels from existing capillaries into avascular tissues resulting from the proliferation of blood vessel endothelial cells [goid 2040] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA that is assembled into chromatin [goid 31490] [evidence IDA]	Tan1; Mis6; 9930111A19Rik; lin-12	Tan1; Mis6; 9930111A19Rik; lin-12
Mus musculus	RefSeq	ILMN_219708	ILMN_314239	A730013G03RIK	XR_035377.1	XR_035377.1		320952	149247504	XR_035377.1	A730013G03Rik		ILMN_2712472	004860136	S	1806	CTGGGTGCTAACTTCTGCGGACCTGTTTTACCCATCCTAAGGTGTCTGAC	1	-	194659552-194659601	1qH6	PREDICTED: Mus musculus RIKEN cDNA A730013G03 gene (A730013G03Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_209962	ILMN_209962	LIM2	NM_177693.3	NM_177693.3		233187	142370624	NM_177693.3	Lim2	NP_808361.1	ILMN_1247117	004060754	S	526	TTTTCTACATGTGTGCCTACCGGATGCATGAGTGCCGGCGCCTAGCCACC	7	+	50691021-50691070	7qB4	Mus musculus lens intrinsic membrane protein 2 (Lim2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence TAS]	The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence TAS]	19kDa; To3; MP19; 4833403J20	19kDa; To3; MP19; 4833403J20
Mus musculus	RefSeq	ILMN_259766	ILMN_259766	YWHAQ	NM_011739.2	NM_011739.2		22630	61098086	NM_011739.2	Ywhaq	NP_035869.1	ILMN_2835686	005890274	S	1905	AGCCTGCACTTCAATACTTTTTCATGCAGAGTTGTGCACATGGGAGAGGG	12	-	21636974-21637023	12qA1.3	Mus musculus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide (Ywhaq), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IPI]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]	AU021156; R74690; MGC118161; AA409740; 14-3-3theta; RP23-402H11.1; 2700028P07Rik	AU021156; R74690; MGC118161; AA409740; 14-3-3theta; RP23-402H11.1; 2700028P07Rik
Mus musculus	RefSeq	ILMN_197452	ILMN_197452	LOC218911	XM_147825.2	XM_147825.2			28477772	XM_147825.2	LOC218911		ILMN_2528182	007380521	S	378	AGCAGCGGTTGCCTCTCCCCAGACGCTGTATGTGCTGCGATTGTCCAGAC										
Mus musculus	RefSeq	ILMN_190489	ILMN_224590	LOC677648	XM_001006762.1	XM_001006762.1		677648	94410333	XM_001006762.1	LOC677648	XP_001006762.1	ILMN_1241467	000610433	S	277	GCCGGCTCACAATCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAG					PREDICTED: Mus musculus similar to Igh protein (LOC677648), mRNA.					
Mus musculus	Riken	ILMN_202522	ILMN_202522	5430417M23RIK	ri|1700051C09|ZX00081K21|AK006754|805					AK006754	5430417M23Rik		ILMN_2550252	003870465	S	7	ACGTGGAGTTTTCTGGGTAGAGGCAGGGTCTCTCCGCCCTAGAGGAGGGA										
Mus musculus	RefSeq	ILMN_242266	ILMN_242266	ZFR	NM_011767.1	NM_011767.1		22763	7106452	NM_011767.1	Zfr	NP_035897.1	ILMN_2867927	005390441	S	3201	GGAAACGAAGAAGGGATAGTGATGGAGTGGATGGATTTGAAGCTGAGGGG	15	+	12113811-12113860	15qA1	Mus musculus zinc finger RNA binding protein (Zfr), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C920030H05Rik	C920030H05Rik
Mus musculus	RefSeq	ILMN_223746	ILMN_223746	TIGD5	NM_178646.3	NM_178646.3		105734	111185888	NM_178646.3	Tigd5	NP_848761.2	ILMN_1221043	003710746	S	4495	GACTGTCTGGAGAAAGCACCCAGCCCAGAAAGATGGGGAGTGTGGGTTTG	15	+	75744659-75744708	15qD3	Mus musculus tigger transposable element derived 5 (Tigd5), mRNA.				AI666797; FLJ14926; AA409995; AA409802	AI666797; FLJ14926; AA409995; AA409802
Mus musculus	Riken	ILMN_202825	ILMN_202825	CSNK2A1-RS3	ri|6030461M12|PX00057P23|AK031617|1359					AK031617	Csnk2a1-rs3		ILMN_1236941	000430243	S	229	GTCGGGACCAGTGCCAAGCAGGGCCAGAGTTTACACAGATGTTAACACAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_203610	ILMN_227594	PEG3	NM_008817.2	NM_008817.2		18616	58331165	NM_008817.2	Peg3	NP_032843.2	ILMN_1225513	001430441	S	2983	GAGAAAGACCTTCTGGAAGCCGACATTATGAGCGCTCTGTCATCCGCAGC	7	-	6662262-6662311	7qA1	Mus musculus paternally expressed 3 (Peg3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Gcap4; End4; mKIAA0287; AL022617; Zfp102; Pw1	Gcap4; End4; mKIAA0287; AL022617; Zfp102; Pw1
Mus musculus	RefSeq	ILMN_188343	ILMN_227594	PEG3	NM_008817.2	NM_008817.2		18616	58331165	NM_008817.2	Peg3	NP_032843.2	ILMN_2677270	005910241	S	4853	CGCTTCCAGCTCAGCCTTTGGCGAGCATCTGAAAAGTCACGCCAGTGTGA	7	-	6660392-6660441	7qA1	Mus musculus paternally expressed 3 (Peg3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Gcap4; End4; mKIAA0287; AL022617; Zfp102; Pw1	Gcap4; End4; mKIAA0287; AL022617; Zfp102; Pw1
Mus musculus	RefSeq	ILMN_188343	ILMN_227594	PEG3	NM_008817.2	NM_008817.2		18616	58331165	NM_008817.2	Peg3	NP_032843.2	ILMN_1245246	002690435	S	5789	CATTTGGTGTGCACCCAGACCCCTTGAGACTGATTGTGTAACCCTTTACA	7	-	6659456-6659505	7qA1	Mus musculus paternally expressed 3 (Peg3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Gcap4; End4; mKIAA0287; AL022617; Zfp102; Pw1	Gcap4; End4; mKIAA0287; AL022617; Zfp102; Pw1
Mus musculus	Riken	ILMN_207047	ILMN_207047	4732465J04RIK	ri|4732465J04|PX00051C18|AK076359|1632					AK076359	4732465J04Rik		ILMN_1234752	003850594	S	1496	GAAGGCTGGAGAGGTGGTGACAGCTGAACAAATGATGGCGCTACGAGTCC										
Mus musculus	RefSeq	ILMN_223034	ILMN_223034	HN1	NM_008258.1	NM_008258.1		15374	6680236	NM_008258.1	Hn1	NP_032284.1	ILMN_2914744	002350703	S	1287	AGTCTCACCCTTGACACTTGTACTCCTTAGTCCTGGACTGTTGCTTAAAG	11	-	115358688-115358737	11qE2	Mus musculus hematological and neurological expressed sequence 1 (Hn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_223034	ILMN_223034	HN1	NM_008258.1	NM_008258.1		15374	6680236	NM_008258.1	Hn1	NP_032284.1	ILMN_2758452	001470528	S	627	CGTGAGCTGACTGTACATCTCTCGGATTGGTTTCATTAAAGGAGAAGCAC	11	-	115359348-115359397	11qE2	Mus musculus hematological and neurological expressed sequence 1 (Hn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218232	ILMN_218232	2310005N03RIK	NM_025511.2	NM_025511.2		66359	70887807	NM_025511.2	2310005N03Rik	NP_079787.1	ILMN_2693258	000150528	S	87	GAGAACACTCCATGTGCTCGAGAATCTATACTCTATGGCTCATTAGGATC	1	+	180251906-180251955	1qH4	Mus musculus RIKEN cDNA 2310005N03 gene (2310005N03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200651	ILMN_200651	LOC383428	XM_357047.1	XM_357047.1			38084891	XM_357047.1	LOC383428		ILMN_1216577	003420039	S	253	AGTCGGCTGTCCCACTGGAGTTTGAGATGTGGAATGTATGTAACCTCTGT										
Mus musculus	Riken	ILMN_205741	ILMN_205741	A330084N02RIK	ri|A330084N02|PX00133G02|AK039680|3732					AK039680	A330084N02Rik		ILMN_1239606	000430477	S	3492	GTGAGCACTGGACTTAGCAGAGTGGTGATAGGTAGTGTGGACTGATGGCC										
Mus musculus	RefSeq	ILMN_209665	ILMN_227937	1700023A16RIK	XM_909859.2	XM_909859.2		69371	94378309	XM_909859.2	1700023A16Rik	XP_914952.1	ILMN_2598014	001980435	S	759	TGAAGCTGTTCGTCATAGTCTACGTGGTCACCATCACTGGACTGTCGTGC				6qG3	PREDICTED: Mus musculus RIKEN cDNA 1700023A16 gene (1700023A16Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_201376	ILMN_201376	LOC385062	XM_358026.1	XM_358026.1			38093410	XM_358026.1	LOC385062		ILMN_2542081	004760201	S	459	CTGTTACACACAGTGGAGCACGAAGGTCCGTCTATATGCGGCTGCCTGCC										
Mus musculus	RefSeq	ILMN_214122	ILMN_214122	SERPINB8	NM_011459.2	NM_011459.2		20725	31543762	NM_011459.2	Serpinb8	NP_035589.1	ILMN_2829250	003400095	S	2496	GTTACAGGGCCACAGGAGGGGACAGGTGAGGAGTGAGGGATGGGAATATA	1	+	109436011-109436060	1qE2.1	Mus musculus serine (or cysteine) peptdiase inhibitor, clade B, member 8 (Serpinb8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	CAP-2; ovalbumin; CAP2; Spi8; NK10	CAP-2; ovalbumin; CAP2; Spi8; NK10
Mus musculus	RefSeq	ILMN_217236	ILMN_217236	1810049H13RIK	NM_025560.2	NM_025560.2		66431	142352675	NM_025560.2	1810049H13Rik	NP_079836.1	ILMN_2680665	002850630	S	462	CCTCCCACCAACTGCTGCATGAGTGGCTGCCCTAACTGTGTATGGGTAGA	11	-	120318216-120318265	11qE2	Mus musculus RIKEN cDNA 1810049H13 gene (1810049H13Rik), mRNA.				RP23-82I5.9	RP23-82I5.9
Mus musculus	MEEBO	ILMN_218821	ILMN_218821	LOC386520	IGLC3_J00585_Ig_lambda_constant_3_26	XM_359369.1			38080098	XM_359369.1	LOC386520		ILMN_1231522	006220471	S	68	TCCACCTTCCCCTGAGGAGCTCCAGGAAAACAAAGCCACACTCGTGTGTC										
Mus musculus	RefSeq	ILMN_237912	ILMN_237912	METT11D1	NM_001029990.1	NM_001029990.1		52535	71725395	NM_001029990.1	Mett11d1	NP_001025161.1	ILMN_2856668	005860707	S	1378	GCAGGGATTTGTACCGCTGTGCCCGTGTCAGCTCCTGGGGAGACCTTTTA	14	+	52504125-52504128:52504205-52504250	14qC2	Mus musculus methyltransferase 11 domain containing 1 (Mett11d1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]	D14Ertd209e; 2310032K15Rik	D14Ertd209e; 2310032K15Rik
Mus musculus	RefSeq	ILMN_236359	ILMN_236359	GM136	NM_001033255.1	NM_001033255.1		214568	85701761	NM_001033255.1	Gm136	NP_001028427.1	ILMN_3118561	000150093	A	1221	GCCGAGGACTGATTAGAGCTCATCGGCTGAAATGTCACCACAAAAGACGG	4	-	34932707-34932742:34932743-34932756	4qA5	Mus musculus gene model 136, (NCBI) (Gm136), mRNA.					
Mus musculus	RefSeq	ILMN_236359	ILMN_236359	GM136	NM_001033255.1	NM_001033255.1		214568	85701761	NM_001033255.1	Gm136	NP_001028427.1	ILMN_3043567	001450131	I	310	CCACCAGCCCCTTTCGGGGAAACCTTCAAACGGATCTATGACTACAAGCC	4	-	34944787-34944836	4qA5	Mus musculus gene model 136, (NCBI) (Gm136), mRNA.					
Mus musculus	MEEBO	ILMN_218445	ILMN_218445	A530045M11	scl24624.17.19_0	NM_177674.2			31343551	NM_177674.2	A530045M11		ILMN_2695926	006100747	S	2445	ATGGCAAGTGTCGCATATGACTTGGAAGAACCGTACCCCCGCCCCCACGA										
Mus musculus	RefSeq	ILMN_201331	ILMN_314708	LOC385049	XM_001473528.1	XM_001473528.1		385049	149263880	XM_001473528.1	LOC385049	XP_001473578.1	ILMN_1253313	003190360	S	159	GGTGTCTTTACCAGGCACAGATAAATTGAGAGCTGATGACATGCTGCTGG	13	+	13367368-13367417	13qA1	PREDICTED: Mus musculus similar to Rho-associated kinase beta (LOC385049), mRNA.					
Mus musculus	RefSeq	ILMN_220106	ILMN_220106	OLFR937	NM_146439.1	NM_146439.1		258431	33239211	NM_146439.1	Olfr937	NP_666650.1	ILMN_1249179	002100725	S	620	TTGTTGTTCCAACCATGACTATTCTTACTTCTTACATCTTCATCATTGCC	9	-	38867580-38867629	9qA5.1	Mus musculus olfactory receptor 937 (Olfr937), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-24	MOR171-24
Mus musculus	RefSeq	ILMN_219452	ILMN_219452	SMC4	NM_133786.3	NM_133786.3		70099	40254109	NM_133786.3	Smc4	NP_598547.1	ILMN_2709097	001740050	S	3547	AAATAAACTAAAAGAAAACTACCAGATGCTCACATTGGGAGGAGATGCTG	3	+	68837079-68837128	3qE1	Mus musculus structural maintenance of chromosomes 4 (Smc4), mRNA. XM_919209	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Smc4l1; 2500002A22Rik; C79747	Smc4l1; 2500002A22Rik; C79747
Mus musculus	RefSeq	ILMN_192760	ILMN_225015	PTPLAD2	NM_025760.3	NM_025760.3		66775	142371211	NM_025760.3	Ptplad2	NP_080036.1	ILMN_1245615	000360709	S	1949	CCCTACACAGGCGCATGCCCAAATACTTTGTGTCTTGGCAACTTGTGTTT	4	-	88058917-88058966	4qC4	Mus musculus protein tyrosine phosphatase-like A domain containing 2 (Ptplad2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4933428I03Rik	4933428I03Rik
Mus musculus	RefSeq	ILMN_197458	ILMN_310805	LOC100041754	XM_001476947.1	XM_001476947.1		100041754	149265495	XM_001476947.1	LOC100041754	XP_001476997.1	ILMN_1237929	001740400	S	157	CTTGCTGTTTAGGACTTCCATCTGCAGGCAAGTGGGGCCATGGGATCTGC	14	-	47190887-47190924:47195354-47195365	14qC1	PREDICTED: Mus musculus hypothetical protein LOC100041754 (LOC100041754), mRNA.					
Mus musculus	RefSeq	ILMN_215839	ILMN_215839	EPHX1	NM_010145.2	NM_010145.2		13849	31981782	NM_010145.2	Ephx1	NP_034275.1	ILMN_2664224	004280402	S	1462	TGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCATACTTATGGAAGATG	1	-	182919840-182919889	1qH4	Mus musculus epoxide hydrolase 1, microsomal (Ephx1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic substance stimulus [goid 14070] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring [goid 19439] [evidence IEA]; The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IMP]	Catalysis of the reaction: cis-stilbene oxide + H2O = (+)-(1R,2R)-1,2-diphenylethane-1,2-diol [goid 33961] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an epoxide + H2O = a glycol [goid 4301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AI195553; Eph1; Eph-1	AI195553; Eph1; Eph-1
Mus musculus	RefSeq	ILMN_218320	ILMN_218320	MIA2	NM_177321.2	NM_177321.2		338320	31341134	NM_177321.2	Mia2	NP_796295.1	ILMN_2694320	004570152	S	1484	CTGAAAATTCTCCCACAGGTAGCATGAAAGACCCCGTGATGCTGGCGAGC	12	+	60209973-60210022	12qC1	Mus musculus melanoma inhibitory activity 2 (Mia2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	MEEBO	ILMN_193217	ILMN_193217	D9ERTD392E	scl36713.8_79				33859709	NM_028181	D9Ertd392e		ILMN_1227277	002120554	S	2584	GCTGGGCTGGCTTGTCTTGTGAACTCTCTTGCACACCTGAATGCTATGGA										
Mus musculus	MEEBO	ILMN_193217	ILMN_193217	D9ERTD392E	scl36713.8_79				33859709	NM_028181	D9Ertd392e		ILMN_2495112	000650703	S	20	ATGTCAAACACTTAGACTTGAACAAATGATTGAATTTCTACTTTAAAAAT										
Mus musculus	RefSeq	ILMN_217026	ILMN_217026	INTS4	NM_027256.1	NM_027256.1		101861	30794413	NM_027256.1	Ints4	NP_081532.1	ILMN_2678269	000870653	S	3009	CCTAGAAACCCTTGTCAGGCACCAGCGAGCCGAAGCCTGGATGTGTATGT	7	+	104689740-104689789	7qE1	Mus musculus integrator complex subunit 4 (Ints4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2610034N24Rik; AW493223; AA692684	2610034N24Rik; AW493223; AA692684
Mus musculus	Riken	ILMN_205748	ILMN_205748	ITGA4	ri|A430035L16|PX00134F16|AK039959|1509					AK039959	Itga4		ILMN_2574929	003390717	S	1042	AAAGGATTCAAGGCACTAGTCAGAGCAAAGCCTTCCCACTTCCTGTTCCC						The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [evidence IMP]		
Mus musculus	RefSeq	ILMN_223241	ILMN_223241	CBLN2	NM_172633.1	NM_172633.1		12405	27777698	NM_172633.1	Cbln2	NP_766221.1	ILMN_2894369	005960520	S	1795	GGCCACACAATTACAAGATGCTTCAAAGAAACAGGACCAGTGCCTCTTCC	18	+	86852070-86852119	18qE4	Mus musculus cerebellin 2 precursor protein (Cbln2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A730004O05; 6330593N19Rik	A730004O05; 6330593N19Rik
Mus musculus	Riken	ILMN_202592	ILMN_202592	A930016O22RIK	ri|A930016O22|PX00066I24|AK020867|1220					AK020867	A930016O22Rik		ILMN_1252047	000070390	S	850	GTTCGAGGTCAGCTTCGGGTTCAGGGGCGTTGTATACCTCCTGTGACCAC										
Mus musculus	RefSeq	ILMN_215304	ILMN_215304	CDC2A	NM_007659.2	NM_007659.2		12534	31542365	NM_007659.2	Cdc2a	NP_031685.2	ILMN_2961747	006940193	S	2756	GCCAGCCTGCCTGAGTTCCAGACCAGCCAGGGCTACAGGAAGAAGTCTTA	10	-	68732046-68732095	10qB5.3	Mus musculus cell division cycle 2 homolog A (S. pombe) (Cdc2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A signal transduction-based surveillance mechanism that acts during a mitotic cell cycle to ensure accurate chromosome segregation by preventing entry into mitosis in the presence of damaged DNA [goid 7095] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [evidence IEA]; Interacting selectively with Hsp70 proteins, any of a group of heat shock proteins around 70kDa in size [goid 30544] [evidence IPI]	Cdc2; CDK1; p34<CDC2>	Cdc2; CDK1; p34<CDC2>
Mus musculus	RefSeq	ILMN_201532	ILMN_201532	SPG7	NM_153176.4	NM_153176.4		234847	148539987	NM_153176.4	Spg7	NP_694816.3	ILMN_2600309	006020632	S	2228	GTGATAAACTATGAGGACATTGAGGCGCTCATTGGCCCGCCGCCCCATGG				8qE1	Mus musculus spastic paraplegia 7 homolog (human) (Spg7), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence TAS]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI452278; Cmar; AU015315; PGN	AI452278; Cmar; AU015315; PGN
Mus musculus	RefSeq	ILMN_216073	ILMN_201532	SPG7	NM_153176.4	NM_153176.4		234847	148539987	NM_153176.4	Spg7	NP_694816.3	ILMN_2742420	000070091	S	2137	GGTGGCCAAAGCCTACAGACACACCGAGAAGGTGCTGCTAGACAACCTGG				8qE1	Mus musculus spastic paraplegia 7 homolog (human) (Spg7), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence TAS]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI452278; Cmar; AU015315; PGN	AI452278; Cmar; AU015315; PGN
Mus musculus	RefSeq	ILMN_209161	ILMN_209161	FBXL22	NM_175206.2	NM_175206.2		74165	31340807	NM_175206.2	Fbxl22	NP_780415.1	ILMN_2593117	006860475	S	3597	GGCCCCACTCTGATTCCTGAATCTGCTTTATTTCTCTGCATAAGGAACCC	9	-	66306736-66306785	9qC	Mus musculus F-box and leucine-rich repeat protein 22 (Fbxl22), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110004B15Rik	1110004B15Rik
Mus musculus	RefSeq	ILMN_217482	ILMN_217482	FZD1	NM_021457.2	NM_021457.2		14362	31981156	NM_021457.2	Fzd1	NP_067432.2	ILMN_2683698	005570309	S	3944	CTATGTCTGTCATACCCTAAAATGACATTGGTTTTTGGATTTGGTATGCA	5	-	4753978-4754027	5qA1	Mus musculus frizzled homolog 1 (Drosophila) (Fzd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IMP]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4926] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AW227548; FZ-1	AW227548; FZ-1
Mus musculus	MEEBO	ILMN_223922	ILMN_223922	CDH5	scl33446.12_65				40254596	NM_009868	Cdh5		ILMN_2771550	001030273	S	3565	GGAATCCTCCCCCAACAAGGCCTTTCTGCAGGGGACTATCGATAGCTCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IC ]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state [goid 1955] [evidence IMP]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199777	ILMN_199777	LOC382999	XM_356792.1	XM_356792.1			38077216	XM_356792.1	LOC382999		ILMN_1231280	007320411	S	3	GGCAGCTGTGTCTGTAGATCATACGGGAAGCGGAGAGCATGCAGGACTTG										
Mus musculus	RefSeq	ILMN_215613	ILMN_215613	D5WSU178E	NM_027652.2	NM_027652.2		28042	111119004	NM_027652.2	D5Wsu178e	NP_081928.2	ILMN_1253323	004540075	S	2809	TGTCGTCCAGGCTGTCGAAGATAAGCCCAGGGGCTTACGTGTATCTGGAG	5	+	30595016-30595065	5qB1	Mus musculus DNA segment, Chr 5, Wayne State University 178, expressed (D5Wsu178e), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Catalysis of the reaction: CDP-ethanolamine + 1,2-diacylglycerol = CMP + a phosphatidylethanolamine [goid 4307] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AI448296; AI452230; 4933402G07Rik; SELI; mKIAA1724; MGC117838; C79563	AI448296; AI452230; 4933402G07Rik; SELI; mKIAA1724; MGC117838; C79563
Mus musculus	RefSeq	ILMN_261549	ILMN_261549	SLC7A2	NM_007514.3	NM_007514.3		11988	113680129	NM_007514.3	Slc7a2	NP_031540.2	ILMN_3038743	000050722	I	1277	TGTTCCCCTTACCCCGAATTCTGTTTGCCATGGCCCGGGATGGCTTACTG	8	+	41993766-41993815	8qA4	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 (Slc7a2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IMP]; The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of, within or between cells [goid 15819] [evidence IDA]; The directed movement of ornithine, 2,5-diaminopentanoic acid, into, out of, within or between cells [goid 15822] [evidence IDA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IDA]; The synthesis or release of nitric oxide following a stimulus during an acute inflammatory response, resulting in an increase in its intracellular or extracellular levels [goid 2537] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IMP]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence IMP]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IDA]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IMP]; Catalysis of the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid [goid 15189] [evidence IDA]; Catalysis of the transfer of L-ornithine from one side of a membrane to the other. L-ornithine is 2,5-diaminopentanoic acid [goid 64] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IDA]; Catalysis of the transfer of arginine from one side of a membrane to the other. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 5289] [evidence IDA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IMP]	Tea; Atrc2; Cat2	Tea; Atrc2; Cat2
Mus musculus	RefSeq	ILMN_218065	ILMN_218065	PRL2B1	NM_025532.3	NM_025532.3		66392	146134958	NM_025532.3	Prl2b1	NP_079808.1	ILMN_1215934	004010296	S	770	ATATCCTGCTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCC				13qA3.1	Mus musculus prolactin family 2, subfamily b, member 1 (Prl2b1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	PLP-K; Prlpk; RP23-142M3.5; Plpk; MGC130538; 2310047B08Rik; mPLP-K	PLP-K; Prlpk; RP23-142M3.5; Plpk; MGC130538; 2310047B08Rik; mPLP-K
Mus musculus	RefSeq	ILMN_210401	ILMN_210401	CTSJ	NM_012007.1	NM_012007.1		26898	7770061	NM_012007.1	Ctsj	NP_036137.1	ILMN_1228474	001170041	S	1201	GTGGTGTGGAATCTGGAACCTGCTTGTTCTACAACAGCATGGCAACTACT	13	-	61101664-61101713	13qB2	Mus musculus cathepsin J (Ctsj), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence ISO]	CATP; MGC117662; Ctsp; CatRLP	CATP; MGC117662; Ctsp; CatRLP
Mus musculus	MEEBO	ILMN_221193	ILMN_221193	PRDX3	scl52314.6.1_5	NM_007452.1			6680689	NM_007452.1	Prdx3		ILMN_2732229	002450059	S	645	GTGTCAACGACCTTCCGGTGGGCCGCAGTGTGGAAGAAACACTCCGTTTG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Maternally driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1893] [evidence IMP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198684	ILMN_322836	LOC546383	XR_032051.1	XR_032051.1		546383	149272317	XR_032051.1	LOC546383		ILMN_1229602	001170576	S	1438	GGCACCAGGTATAGTTACATGGACCCCAACTACTTCCCAGGCAACAGATG					PREDICTED: Mus musculus similar to zinc finger, ZZ domain containing 3 (LOC546383), misc RNA.					
Mus musculus	RefSeq	ILMN_211191	ILMN_211191	PDIK1L	NM_146156.2	NM_146156.2		230809	40254185	NM_146156.2	Pdik1l	NP_666268.1	ILMN_1220174	005050113	S	4239	CCTGTTGTCACTTAGAAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGG	4	-	133831251-133831300	4qD3	Mus musculus PDLIM1 interacting kinase 1 like (Pdik1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	BC027088; MGC36635	BC027088; MGC36635
Mus musculus	RefSeq	ILMN_211191	ILMN_211191	PDIK1L	NM_146156.2	NM_146156.2		230809	40254185	NM_146156.2	Pdik1l	NP_666268.1	ILMN_2620475	006510600	S	2724	CCCCACGGGGATCTTTTTAAGCGTTAAGATGCAAAAGGCAATAGACTATC	4	-	133832766-133832815	4qD3	Mus musculus PDLIM1 interacting kinase 1 like (Pdik1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	BC027088; MGC36635	BC027088; MGC36635
Mus musculus	Riken	ILMN_202332	ILMN_202332	4930511J15RIK	ri|4930511J15|PX00033N18|AK015758|1343					AK015758	4930511J15Rik		ILMN_1213141	002940379	S	1028	GGAATCACGCACTTCACTCCCTGGACAACAGCAATGAGAACTCGCCTCTG										
Mus musculus	RefSeq	ILMN_187298	ILMN_251475	LSM14B	NM_177727.2	NM_177727.2		241846	31343196	NM_177727.2	Lsm14b	NP_808395.1	ILMN_2676165	003800025	S	592	CCATCTCCACAGCCTGTTTCAGAGCTTGACATGTCCTCAGAGCCACCTCA	2	+	179958420-179958469	2qH4	Mus musculus LSM14 homolog B (SCD6, S. cerevisiae) (Lsm14b), mRNA.				BC040823; 9430078B04	BC040823; 9430078B04
Mus musculus	RefSeq	ILMN_251475	ILMN_251475	LSM14B	NM_177727.2	NM_177727.2		241846	31343196	NM_177727.2	Lsm14b	NP_808395.1	ILMN_2782663	007610086	S	1439	CAGAAGGCAACACTACAGTCAGCAGGAGAAGTGAACCTTGTGTACCAGCC	2	+	179963746-179963795	2qH4	Mus musculus LSM14 homolog B (SCD6, S. cerevisiae) (Lsm14b), mRNA.				BC040823; 9430078B04	BC040823; 9430078B04
Mus musculus	RefSeq	ILMN_213209	ILMN_213209	BRCA2	NM_009765.2	NM_009765.2		12190	124487410	NM_009765.2	Brca2	NP_033895.2	ILMN_2634750	004200601	S	10267	GGCGACAGCAGTGAGAAATTAGCTGTTGAGTCTTAGCCTCCCGGTTTGTA	5	+	151342305-151342354	5qG3	Mus musculus breast cancer 2 (Brca2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-C radiation stimulus. UV-C radiation (UV-C light) spans the wavelengths 100 to 290 nm [goid 10225] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IMP]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, resulting in the induction of the transcription of p21 (also known as WAF1, CIP1 and SDI1) or any equivalent protein, in response to the detection of DNA damage [goid 6978] [evidence IMP]; Any process that prevents the collapse of stalled replication forks [goid 48478] [evidence IMP]; The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching [goid 43009] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A cell cycle process that modulates the frequency, rate or extent of the progression through the S phase of the mitotic cell cycle [goid 7090] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IGI]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Cytokinesis that occurs in the context of cell cycle progression and result in the division of the cytoplasm of a cell and its separation into two daughter cells [goid 33205] [evidence IMP]	Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	Fancd1; RAB163; AW045498; AI256696	Fancd1; RAB163; AW045498; AI256696
Mus musculus	RefSeq	ILMN_218889	ILMN_218889	IGJ	NM_152839.1	NM_152839.1		16069	23346415	NM_152839.1	Igj	NP_690052.1	ILMN_1221256	004250162	S	891	CACTGTGTAGAGAAAACAGCCAATGAACACAGGAAGTTACGTATCTTCAC	5	-	88949899-88949948	5qE1	Mus musculus immunoglobulin joining chain (Igj), mRNA.		An immune response mediated through a body fluid [goid 6959] [evidence ISS]	Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence ISS]	AI323815; Jch; 9530090F24Rik	AI323815; Jch; 9530090F24Rik
Mus musculus	RefSeq	ILMN_192935	ILMN_192935	UBE2E2	NM_144839.1	NM_144839.1		218793	21450232	NM_144839.1	Ube2e2	NP_659088.1	ILMN_2792485	002900139	S	1179	TCACTGTGCATTACTGAGACCCTGTCACAAGCCTTCTGTCCCCCACACAG	14	-	19406236-19406285	14qA2-qA3	Mus musculus ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) (Ube2e2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	BC016265; MGC28917	BC016265; MGC28917
Mus musculus	RefSeq	ILMN_209752	ILMN_232260	LOC633778	XM_908293.2	XM_908293.2		633778	94390472	XM_908293.2	LOC633778	XP_913386.1	ILMN_2598876	000990093	S	4758	TTCCTTTTATCAATGATTTTGGTGTTGAACGACTGCATTAAAACATTATT					PREDICTED: Mus musculus similar to glucagon-like peptide-2 receptor (LOC633778), mRNA.					
Mus musculus	RefSeq	ILMN_209752	ILMN_232260	LOC633778	XM_908293.2	XM_908293.2		633778	94390472	XM_908293.2	LOC633778	XP_913386.1	ILMN_2657392	002450494	S	1437	CTGAGCTCCTTCCATGGATTTCTGGTGGCCTTGCAGTACGGCTTTGCCAG					PREDICTED: Mus musculus similar to glucagon-like peptide-2 receptor (LOC633778), mRNA.					
Mus musculus	RefSeq	ILMN_209752	ILMN_232260	LOC633778	XM_908293.2	XM_908293.2		633778	94390472	XM_908293.2	LOC633778	XP_913386.1	ILMN_1228454	007380438	S	1350	GGGGTTCATGAGTTCCTCTTCACTTTCTTCACCGACGACCAAGTTCAAGG					PREDICTED: Mus musculus similar to glucagon-like peptide-2 receptor (LOC633778), mRNA.					
Mus musculus	RefSeq	ILMN_243372	ILMN_243372	V1RG7	NM_134208.1	NM_134208.1		171242	21717738	NM_134208.1	V1rg7	NP_598969.1	ILMN_2885830	005080022	S	682	GTCTCTCCTGAGGACCAAGCCACCAAAACTATCCTCATCCTGGTTTGTAC	7	+	12738494-12738543	7qA1	Mus musculus vomeronasal 1 receptor, G7 (V1rg7), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	MGC130085; MGC130086	MGC130085; MGC130086
Mus musculus	Riken	ILMN_207012	ILMN_207012	8030447N19RIK	ri|8030447N19|PX00650L08|AK078759|4545					AK078759	8030447N19Rik		ILMN_2584381	005270424	S	4447	GAGGCCATTAGTGTAAGAAAGAGTCGAGGGTGCATGGGAGAGGCTAAAGG										
Mus musculus	RefSeq	ILMN_215576	ILMN_215576	KRT17	NM_010663.2	NM_010663.2		16667	141801821	NM_010663.2	Krt17	NP_034793.1	ILMN_2661214	001780341	S	1413	CTCCCCAGCATTCCTATGCTTGAGACCATTAAAGCTTGCTGACCTGAAGT	11	-	100117579-100117628	11qD	Mus musculus keratin 17 (Krt17), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of hair follicle development [goid 51798] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 45727] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [evidence IMP]; Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [evidence IGI]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IGI]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IGI]	K17; Krt1-17	K17; Krt1-17
Mus musculus	RefSeq	ILMN_199845	ILMN_199845	LOC383078	XM_356846.1	XM_356846.1			38077947	XM_356846.1	LOC383078		ILMN_2536691	005900673	S	221	AGCCCGAGCTGACTCTAGGCCTCCATCCTGGGAGGAACCCCAATTTACCT										
Mus musculus	RefSeq	ILMN_214975	ILMN_214975	OLFR686	NM_147069.1	NM_147069.1		259072	22128818	NM_147069.1	Olfr686	NP_667280.1	ILMN_2654109	001030504	S	650	CCTACTCTTATGGACAGATTGTGAAGACAGTGATGCGTTTTCCTTCTCCA	7	-	112352156-112352205	7qE3	Mus musculus olfactory receptor 686 (Olfr686), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR35-1	MOR35-1
Mus musculus	MEEBO	ILMN_186813	ILMN_186813	PACSIN2	scl46894.15_153				7106380	NM_011862	Pacsin2		ILMN_1248252	003190348	S	16	CTCAAGCTGATGATCTCTGGGTGTAATGTGATCAATGCAGGTCCCAGCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IDA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218142	ILMN_218142	KRTAP15	NM_013713.1	NM_013713.1		26560	7305212	NM_013713.1	Krtap15	NP_038741.1	ILMN_1236982	006900692	S	685	GAGAGCTAGCATTGCAACTATTATGTAAATGCTTGGATCACTTCTTTCTG	16	+	88829938-88829987	16qC3.3	Mus musculus keratin associated protein 15 (Krtap15), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			Pmg2; Pmg-2; MGC143617	Pmg2; Pmg-2; MGC143617
Mus musculus	RefSeq	ILMN_219047	ILMN_219047	SLC45A3	NM_145977.1	NM_145977.1		212980	22122420	NM_145977.1	Slc45a3	NP_666089.1	ILMN_1218226	005270504	S	2903	GTTCCTGCTCAAGGATTGGGACCCAAGGTCTCCACAGCATACCAAATCCC	1	+	133879104-133879153	1qE4	Mus musculus solute carrier family 45, member 3 (Slc45a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AU023994; AU043764; IPCA-6; 2210413P12Rik; PRST; MGC32471; Prostein; Pcanap6	AU023994; AU043764; IPCA-6; 2210413P12Rik; PRST; MGC32471; Prostein; Pcanap6
Mus musculus	Riken	ILMN_203075	ILMN_203075	E430039K24RIK	ri|E430039K24|PX00101O02|AK089106|1833					AK089106	E430039K24Rik		ILMN_1254360	003370026	S	1609	GTTCTCAGCAGGCAAAGCCAGAATGGGGGTCGGGCTGGGACCTAAATCAA										
Mus musculus	Riken	ILMN_203362	ILMN_203362	SLIT2	ri|8030486P14|PX00104O05|AK033292|1915					AK033292	Slit2		ILMN_1245807	000510379	S	1147	GGGATCCAATACCCTCTTCTGGACCTGTGGACAACTACACTAATGTGTGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]		
Mus musculus	RefSeq	ILMN_205953	ILMN_311730	LOC100041549	XR_031163.1	XR_031163.1		100041549	149275213	XR_031163.1	LOC100041549		ILMN_1224938	005860484	S	2875	CCTCCAGAGAACTGGAATTAATGGCATACCACCATGCTGACCCTTCTCCC	Un|NT_166434.1	+	90597-90646		PREDICTED: Mus musculus similar to RIKEN cDNA 4933409K07 gene (LOC100041549), misc RNA.					
Mus musculus	RefSeq	ILMN_198101	ILMN_244794	EG224576	XM_621454.3	XM_621454.3		224576	94401692	XM_621454.3	EG224576	XP_621454.3	ILMN_1215517	005080719	S	2396	GTGTCCTGGGATACCTCTGCTCCTTGGCATTTGGAGGATATACCATGGCT	17	-	20404798-20404847	17qA3.2	PREDICTED: Mus musculus predicted gene, EG224576 (EG224576), mRNA.					
Mus musculus	RefSeq	ILMN_225256	ILMN_225256	CD226	NM_178687.2	NM_178687.2		225825	85540455	NM_178687.2	Cd226	NP_848802.2	ILMN_3150302	002190228	A	2189	CACAGTAGTGTAGGAATCTGAGAGCAGAGAGTTTGGGAGGGGGTGAAGAG	18	+	89439421-89439470	18qE4	Mus musculus CD226 antigen (Cd226), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TLiSA1; Pta1; BC051526; DNAM1; DNAM-1	TLiSA1; Pta1; BC051526; DNAM1; DNAM-1
Mus musculus	RefSeq	ILMN_225256	ILMN_225256	CD226	NM_178687.2	NM_178687.2		225825	85540455	NM_178687.2	Cd226	NP_848802.2	ILMN_3071525	005820438	I	534	GCCTCAGAAGCAGACATTGGCATCTACTCCTGCTTGTTTCATGCTTTCCC	18	+	89376667-89376716	18qE4	Mus musculus CD226 antigen (Cd226), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TLiSA1; Pta1; BC051526; DNAM1; DNAM-1	TLiSA1; Pta1; BC051526; DNAM1; DNAM-1
Mus musculus	RefSeq	ILMN_217537	ILMN_217537	ID2	NM_010496.2	NM_010496.2		15902	31560579	NM_010496.2	Id2	NP_034626.1	ILMN_1228557	001030519	S	599	TAAAAAGAAAGCGGAAGGAAAACTAAGGATGATCGTCTTGCCCAGGTGTC	12	-	25779263-25779312	12qA1.3	Mus musculus inhibitor of DNA binding 2 (Id2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence TAS]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IGI]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C78922; Idb2; AI255428	C78922; Idb2; AI255428
Mus musculus	RefSeq	ILMN_217537	ILMN_217537	ID2	NM_010496.2	NM_010496.2		15902	31560579	NM_010496.2	Id2	NP_034626.1	ILMN_2887239	004490500	S	950	TGAGTGAACCTTGTGGACTCTTTAATTAGAGTTTTCTTGTATAGTGGCAG	12	-	25778912-25778961	12qA1.3	Mus musculus inhibitor of DNA binding 2 (Id2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence TAS]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IGI]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C78922; Idb2; AI255428	C78922; Idb2; AI255428
Mus musculus	RefSeq	ILMN_197262	ILMN_197262	LOC228065	XM_140996.2	XM_140996.2			38074866	XM_140996.2	LOC228065		ILMN_2527507	004490746	S	841	CCCTGGGGCAAAGGTATCATTGGCTATGTCGGGGAACACGGAGAAACTGT										
Mus musculus	MEEBO	ILMN_192030	ILMN_192030	PPP1R3E	scl45553.2.45_40				51768566	XM_356741	Ppp1r3e		ILMN_2484358	002630382	S	20	CTGAAATGTCAGGCTCCATATAGGGGGGCTTCTGTCCTGGCTCTGGCCAA							The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]			
Mus musculus	RefSeq	ILMN_222420	ILMN_222420	FAM168B	NM_174997.1	NM_174997.1		214469	33239369	NM_174997.1	Fam168b	NP_778162.1	ILMN_2749354	003940494	S	4476	GAGGGCAGTGGGTACGTCTGGTGCAGACCGTGGGCAGTGTATAGAGCAGT	1	-	34870484-34870533	1qB	Mus musculus family with sequence similarity 168, member B (Fam168b), mRNA.				mKIAA4042; KIAA4042; MGC58017	mKIAA4042; KIAA4042; MGC58017
Mus musculus	RefSeq	ILMN_214363	ILMN_214363	TATDN3	XM_129661.10	XM_129661.10		68972	149247247	XM_129661.10	Tatdn3	XP_129661.4	ILMN_2647204	001300736	S	963	GCCTCAGAGAAAGAAGCCATCTTACATGGCTAGCAGTCACAGTTTTACAG	1	-	192869934-192869983	1qH6	PREDICTED: Mus musculus TatD DNase domain containing 3 (Tatdn3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16888] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199318	ILMN_199318	LOC235857	XM_135371.3	XM_135371.3			38094587	XM_135371.3	LOC235857		ILMN_2534823	004560646	S	2160	GCTTGGTGGATACCAGTCTCGTGCTATGGGGCTCATGAAACAGTTGAATG										
Mus musculus	RefSeq	ILMN_229890	ILMN_229890	LOC229571	NM_001034860.1	NM_001034860.1		229571	85702194	NM_001034860.1	LOC229571	NP_001030032.1	ILMN_2894763	002360315	S	1685	ATCAAGGTGCTCAGTTCCTCCTCCAACATCATGTCAGCTTGGACACTGTC	3	+	93160783-93160832	3qF1	Mus musculus similar to TDPOZ4 (LOC229571), mRNA.					
Mus musculus	Riken	ILMN_202878	ILMN_202878	A130048K13RIK	ri|A130048K13|PX00124C02|AK037770|998					AK037770	A130048K13Rik		ILMN_1255500	001230110	S	733	TCTCCTCTGTGTGGGCGTCACTATGCTGGGCGATGCAGGCGTGTGAAGAA										
Mus musculus	RefSeq	ILMN_221363	ILMN_221363	NDUFB3	NM_025597.2	NM_025597.2		66495	142366150	NM_025597.2	Ndufb3	NP_079873.1	ILMN_2734511	002900301	S	175	CATTAGAAACGGTGCAGAAGAAGCTTGCTGCCCGAGGGCTGAGGGATCCA	1	+	58648036-58648085	1qC1.3	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 (Ndufb3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	2700033I16Rik; AI415450	2700033I16Rik; AI415450
Mus musculus	RefSeq	ILMN_187798	ILMN_228657	FLI1	NM_008026.4	NM_008026.4		14247	145966776	NM_008026.4	Fli1	NP_032052.1	ILMN_2621086	007330612	S	1323	TGCCTTCCTACCATGCCCATCAACAGAAGGTGAACTTTGTCCCGTCTCAC				9qA4	Mus musculus Friend leukemia integration 1 (Fli1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence TAS]	Sic1; SIC-1; Fli-1; EWSR2	Sic1; SIC-1; Fli-1; EWSR2
Mus musculus	RefSeq	ILMN_216607	ILMN_216607	SIGIRR	NM_023059.3	NM_023059.3		24058	142374281	NM_023059.3	Sigirr	NP_075546.2	ILMN_2673121	006480161	S	1242	GAACCTGAGTCGCTGTCGGCGTCTCATCGTGGTTCTTTCAGATGCCTTCC	7	-	148278310-148278359	7qF5	Mus musculus single immunoglobulin and toll-interleukin 1 receptor (TIR) domain (Sigirr), mRNA.	Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45079] [evidence IMP]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the cytokine and chemokine mediated signaling pathway [goid 1960] [evidence IMP]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI256711; TIR8; MGC102426	AI256711; TIR8; MGC102426
Mus musculus	RefSeq	ILMN_188457	ILMN_227592	MMS19	NM_028152.3	NM_028152.3		72199	133892783	NM_028152.3	Mms19	NP_082428.1	ILMN_1220252	003520672	S	3857	GTCCCTGTGTAGTACTCTAAGGCAAGCCTGATGGCTCTTCATGGTCATGG	19	-	42018255-42018304	19qC3	Mus musculus MMS19 (MET18 S. cerevisiae) (Mms19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]		Mms19; C86341; C79368; 2410001K24Rik; AI316855; 2610042O15Rik	Mms19; C86341; C79368; 2410001K24Rik; AI316855; 2610042O15Rik
Mus musculus	RefSeq	ILMN_222653	ILMN_222653	TEC	NM_013689.4	NM_013689.4		21682	76253945	NM_013689.4	Tec	NP_038717.1	ILMN_2752933	002350270	S	2284	CATGGGACTATGCTAGCTGATGCTAGCAGAAAGCCAGGGTGGTTGTGATG	5	-	73147212-73147261	5qC3.2	Mus musculus cytoplasmic tyrosine kinase, Dscr28C related (Drosophila) (Tec), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211887	ILMN_255712	ATF7IP2	XM_489510.3	XM_489510.3		75329	94400288	XM_489510.3	Atf7ip2	XP_489510.1	ILMN_2620418	001710026	S	2581	CAGGAGAGACTTGAGATGTCTAAGTCACTACCCAAAAGAAACAAACTAGG				16qA1	PREDICTED: Mus musculus activating transcription factor 7 interacting protein 2, transcript variant 2 (Atf7ip2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_206653	ILMN_206653	D530007E13RIK	ri|D530007E13|PX00318G13|AK085196|1823					AK085196	D530007E13Rik		ILMN_2581681	007400397	S	1511	GATCCGTCTTCCATGGTGAGAGACGTGTCAGGCACAGGTGGTATTCCTTG										
Mus musculus	RefSeq	ILMN_249427	ILMN_249427	PLN	NM_023129.3	NM_023129.3		18821	31560850	NM_023129.3	Pln	NP_075618.1	ILMN_2854828	001500162	S	2049	AGTTGGCCATGCTGAGAGAAACGTGAGGCTGAAGCTGAAAAGCACCAGGC	10	+	53065522-53065571	10qB3	Mus musculus phospholamban (Pln), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction [goid 45822] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IGI]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 5246] [evidence IEA]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of ATP to ADP and orthophosphate [goid 42030] [evidence IEA]	PLB	PLB
Mus musculus	RefSeq	ILMN_220249	ILMN_220249	RASL10A	NM_145216.3	NM_145216.3		75668	88853579	NM_145216.3	Rasl10a	NP_660251.1	ILMN_2719702	001660152	S	695	GAGCTTCTGCGTTGTGCTTTGGTGCGCACACGTCCTGCACATCCGACCCT	11	+	4954731-4954780	11qA1	Mus musculus RAS-like, family 10, member A (Rasl10a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	RP23-64E17.6; MGC130093; AI852688; MGC130094; 2210403B10Rik	RP23-64E17.6; MGC130093; AI852688; MGC130094; 2210403B10Rik
Mus musculus	Riken	ILMN_207209	ILMN_207209	C130073O12RIK	ri|C130073O12|PX00666L09|AK081751|2107					AK081751	C130073O12Rik		ILMN_2585867	006960039	S	1888	ATGGGTTGTTATACTGTACTCTACATTTTGGACAGCACGTGAAGTCTGCC										
Mus musculus	Riken	ILMN_205847	ILMN_205847	A730027E01RIK	ri|A730027E01|PX00150I13|AK042822|1946					AK042822	A730027E01Rik		ILMN_2575665	002850739	S	1643	GCACAGTGCTTTCTCCCTGGGGTATCATGGTATCTTTTGTCTCTGGAAGG										
Mus musculus	RefSeq	ILMN_223048	ILMN_223048	CYCS	NM_007808.4	NM_007808.4		13063	142370730	NM_007808.4	Cycs	NP_031834.1	ILMN_1250564	000670692	S	790	CCTCTTTCAGGTCATGGCTAACCACCAGGAGGCAACTGTCTATTCTTGAC	6	-	50514781-50514830	6qB2.3	Mus musculus cytochrome c, somatic (Cycs), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]; The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 42743] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IDA]		
Mus musculus	Riken	ILMN_204143	ILMN_204143	C730009F21RIK	ri|C730009F21|PX00086D22|AK050063|1436					AK050063	C730009F21Rik		ILMN_1219580	001030673	S	1250	GTCTGTGACCAGCAATTCTCACTCTACTAGTGATAGAGCCCTTTGCCTGC										
Mus musculus	RefSeq	ILMN_219064	ILMN_249250	GUCY2F	NM_001007576.1	NM_001007576.1		245650	56119097	NM_001007576.1	Gucy2f	NP_001007577.1	ILMN_1230293	004180474	S	2700	TATTGATTCTATGCTTCGGATGTTGGAGCAGTATTCTAGCAACTTGGAAG	X	-	138539866-138539915	XqF2	Mus musculus guanylate cyclase 2f (Gucy2f), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence ISO]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	GC-F; A930002I06; GC2	GC-F; A930002I06; GC2
Mus musculus	MEEBO	ILMN_187795	ILMN_187795	ABI3	scl39683.8_579				21313407	NM_025659	Abi3		ILMN_1223041	006450687	S	1361	GAGTTTAAGCACCTCGCCCAGAGGACCCCCAGCTCATGCTCAGAAGATCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_187795	ILMN_187795	ABI3	scl39683.8_579				21313407	NM_025659	Abi3		ILMN_2447169	006940326	S	19	GCTCTCATAGGATCCCTTAAGAGAGGGGATGACTCGTCAAGGATCACTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISA]	The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_201396	ILMN_201396	LOC385089	XM_358046.1	XM_358046.1			38093492	XM_358046.1	LOC385089		ILMN_1218316	004570521	S	262	GTCAAGCTGGGGATTCACTCCCTAACCAAAGATGTTCCCAGTGACGCTTG										
Mus musculus	Riken	ILMN_206274	ILMN_206274	D330006D04RIK	ri|D330006D04|PX00190L12|AK084485|3519					AK084485	D330006D04Rik		ILMN_2578888	001440364	S	3091	GGCTGGTCTTCAACTCATGATTCTGCTGCCTAAGCCTCCTGAGTACAGAG										
Mus musculus	RefSeq	ILMN_214849	ILMN_214849	SLC6A5	NM_148931.2	NM_148931.2		104245	26080427	NM_148931.2	Slc6a5	NP_683733.1	ILMN_1249955	004180521	S	6590	CCAGGAATAGGAGGTTGATTCTTAAATTGTGTACTTGGATAAAGTCCTAG	7	+	57218850-57218899	7qB5	Mus musculus solute carrier family 6 (neurotransmitter transporter, glycine), member 5 (Slc6a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	Glyt2; prestin	Glyt2; prestin
Mus musculus	RefSeq	ILMN_214849	ILMN_214849	SLC6A5	NM_148931.2	NM_148931.2		104245	26080427	NM_148931.2	Slc6a5	NP_683733.1	ILMN_2987729	000780025	S	3370	GCATGTCAGCCTTTGTATCGCCATTGTATCTGCATGGTGTCTTTGGCACC	7	+	57215630-57215679	7qB5	Mus musculus solute carrier family 6 (neurotransmitter transporter, glycine), member 5 (Slc6a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	Glyt2; prestin	Glyt2; prestin
Mus musculus	MEEBO	ILMN_191962	ILMN_191962	C920027I18RIK	scl0320465.3_2						C920027I18Rik		ILMN_2483771	005050369	S	14	CCCGAAACCTCACTATGGATGATTTTGAACGTCGCAGAGAACTCAGGAGA										
Mus musculus	RefSeq	ILMN_211392	ILMN_211392	PRSS16	NM_019429.2	NM_019429.2		54373	133893216	NM_019429.2	Prss16	NP_062302.1	ILMN_2615359	001050019	S	1791	CCTTTGTAGGTAGTGATATTCTGTATGGTAAATGTCAGGGGAATGTGGCT	13	-	22094356-22094405	13qA3.1	Mus musculus protease, serine, 16 (thymus) (Prss16), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	AI448615; TSSP	AI448615; TSSP
Mus musculus	RefSeq	ILMN_212525	ILMN_210451	PELI1	NM_023324.2	NM_023324.2		67245	114158716	NM_023324.2	Peli1	NP_075813.2	ILMN_2627441	006330091	S	2103	GTACCTTAGAATGTTGTGATAGGCTAGCATGGTAATGATGGTGTCACACA	11	+	21043241-21043290	11qA3.1	Mus musculus pellino 1 (Peli1), mRNA.				D11Ertd676e; A930031K15Rik; AA409794; 2810468L03Rik; AI586297	D11Ertd676e; A930031K15Rik; AA409794; 2810468L03Rik; AI586297
Mus musculus	RefSeq	ILMN_210451	ILMN_210451	PELI1	NM_023324.2	NM_023324.2		67245	114158716	NM_023324.2	Peli1	NP_075813.2	ILMN_1239770	003360220	S	2711	GGCATTAGAACATCTAGAGCTGTAAAGGGTTGGCTGCAATGGTACCTCCC	11	+	21043849-21043898	11qA3.1	Mus musculus pellino 1 (Peli1), mRNA.				D11Ertd676e; A930031K15Rik; AA409794; 2810468L03Rik; AI586297	D11Ertd676e; A930031K15Rik; AA409794; 2810468L03Rik; AI586297
Mus musculus	RefSeq	ILMN_212155	ILMN_212155	FRAP1	NM_020009.1	NM_020009.1		56717	9910227	NM_020009.1	Frap1	NP_064393.1	ILMN_1257068	000730082	S	2156	GGCCCAGGCAGAAAACTTACAAGCTCTGTTTGTGGCTCTGAATGACCAGG	4|NT_039289.1	+	27217-27266	4qE2	Mus musculus FK506 binding protein 12-rapamycin associated protein 1 (Frap1), mRNA.		The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence ISO]; Any process that reduces cell size [goid 45792] [evidence IGI]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RAPT1; 2610315D21Rik; MGC118056; FRAP; AI327068; mTOR; FRAP2; RAFT1; flat	RAPT1; 2610315D21Rik; MGC118056; FRAP; AI327068; mTOR; FRAP2; RAFT1; flat
Mus musculus	RefSeq	ILMN_212155	ILMN_212155	FRAP1	NM_020009.1	NM_020009.1		56717	9910227	NM_020009.1	Frap1	NP_064393.1	ILMN_2756460	002490646	S	8081	GACAGAATAATCCAGTTGGTCCTCTCAACCAGGGGCTCCAACGGCAAGGA	4|NT_039289.1	+	147865773-147865822	4qE2	Mus musculus FK506 binding protein 12-rapamycin associated protein 1 (Frap1), mRNA.		The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence ISO]; Any process that reduces cell size [goid 45792] [evidence IGI]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RAPT1; 2610315D21Rik; MGC118056; FRAP; AI327068; mTOR; FRAP2; RAFT1; flat	RAPT1; 2610315D21Rik; MGC118056; FRAP; AI327068; mTOR; FRAP2; RAFT1; flat
Mus musculus	RefSeq	ILMN_196033	ILMN_220374	PCNT	NM_008787.3	NM_008787.3		18541	93004084	NM_008787.3	Pcnt	NP_032813.3	ILMN_2520992	000110465	S	4330	CCTCGAGGCGCTTAATTTCTTCTTCTTGGATTAGCAATTGTTGATCGGCA	10	-	75881172-75881221	10qC1	Mus musculus pericentrin (kendrin) (Pcnt), transcript variant 1, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [evidence IDA]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence ISO]		kendrin; C86676; AW476095; KEN; Pcnt2	kendrin; C86676; AW476095; KEN; Pcnt2
Mus musculus	RefSeq	ILMN_220374	ILMN_220374	PCNT	NM_008787.3	NM_008787.3		18541	93004084	NM_008787.3	Pcnt	NP_032813.3	ILMN_2721221	003130619	S	9181	AGCTTCCACCTCCACACACTGCTACATAGAGGGAGCCCGCTGCTCTCATC	10	-	75855747-75855784:75858705-75858716	10qC1	Mus musculus pericentrin (kendrin) (Pcnt), transcript variant 1, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [evidence IDA]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence ISO]		kendrin; C86676; AW476095; KEN; Pcnt2	kendrin; C86676; AW476095; KEN; Pcnt2
Mus musculus	RefSeq	ILMN_201097	ILMN_201097	LOC384776	XM_357860.1	XM_357860.1			38089104	XM_357860.1	LOC384776		ILMN_1229168	004610678	S	2	TGCCGTGTGTCCTTTCAGCACACGCTAACCCTACGGGAGGATGCAATACC										
Mus musculus	MEEBO	ILMN_194811	ILMN_194811	A730063M14RIK	scl38332.1_14						A730063M14Rik		ILMN_2509830	000430543	S	8	CTGGATCAGGCTTGGCACATGACGCAAAGTGGGGGCGAGTCTGGAATATG										
Mus musculus	RefSeq	ILMN_223631	ILMN_223631	ATN1	NM_007881.4	NM_007881.4		13498	47059493	NM_007881.4	Atn1	NP_031907.2	ILMN_1255644	004070431	S	4141	TGCCGAATCCTTGGTGGCCACTGCCCCTCCCCTAACCCATTGGTGTGATT	6	-	124693847-124693896	6qF2	Mus musculus atrophin 1 (Atn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 9404] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IGI]; Interacting selectively with a toxin receptor, a receptor for substances that cause injury to living organisms [goid 50827] [evidence IDA]	Drpla; Atr1; atrophin-1	Drpla; Atr1; atrophin-1
Mus musculus	RefSeq	ILMN_200764	ILMN_200764	LOC384538	XM_357700.1	XM_357700.1			38085952	XM_357700.1	LOC384538		ILMN_2539917	007380014	S	966	CACCGTGCTGACCTCCAATATCGTTAAGCTGGAGCCTGGTCGACGTGTAT										
Mus musculus	Riken	ILMN_201665	ILMN_201665	NSSR	ri|1500019P14|R000021A05|AK005295|467					AK005295	Nssr		ILMN_1245192	003130524	S	407	GGCAAGTAGACAAGCCAAAGACCTCTTAAGGATCAGGCTTGAAGAGAAGG										
Mus musculus	RefSeq	ILMN_221332	ILMN_323566	1700010C24RIK	NM_027401.2	NM_027401.2		70363	118130358	NM_027401.2	1700010C24Rik	NP_081677.1	ILMN_2734109	003420224	S	1176	CCTGATTGGACGTGCAGCTCATATAGCCGTGCTGGACTCGGAACTCTTCC	15	-	71276373-71276422	15qD3	Mus musculus RIKEN cDNA 1700010C24 gene (1700010C24Rik), mRNA.				A830008O07Rik; MGC159350; MGC159348	A830008O07Rik; MGC159350; MGC159348
Mus musculus	Riken	ILMN_202681	ILMN_202681	AABP3-PENDING	ri|6720482K01|PX00060I05|AK020170|831					AK020170	Aabp3-pending		ILMN_1234200	000130068	S	154	AAGCGCGCGGCAGCTAAACGTCACTCCCCGCCATCAACCTGGCGTTGCTA										
Mus musculus	RefSeq	ILMN_216472	ILMN_216472	DCLRE1C	NM_146114.2	NM_146114.2		227525	142368826	NM_146114.2	Dclre1c	NP_666226.1	ILMN_1240123	006620121	S	241	TCCTGTACTGTTCTCCAGTCACTAAGGAGCTGTTGTTAACTAGCCCAAAG	2	+	3346551-3346600	2qA1	Mus musculus DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) (Dclre1c), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end [goid 8409] [evidence ISA]; Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks [goid 14] [evidence ISO]	MGC123409; Snm1l; 9930121L06Rik; AI661365	MGC123409; Snm1l; 9930121L06Rik; AI661365
Mus musculus	RefSeq	ILMN_216472	ILMN_216472	DCLRE1C	NM_146114.2	NM_146114.2		227525	142368826	NM_146114.2	Dclre1c	NP_666226.1	ILMN_2671461	004210093	S	1487	CCCCTCGACACTCGTCCAGCAAAATGCTGATCCGGATGTGGACATACCAC	2	+	3370382-3370431	2qA1	Mus musculus DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) (Dclre1c), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end [goid 8409] [evidence ISA]; Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks [goid 14] [evidence ISO]	MGC123409; Snm1l; 9930121L06Rik; AI661365	MGC123409; Snm1l; 9930121L06Rik; AI661365
Mus musculus	RefSeq	ILMN_219477	ILMN_219477	GEMIN7	NM_027189.1	NM_027189.1		69731	21312379	NM_027189.1	Gemin7	NP_081465.1	ILMN_2933618	005130647	S	280	ACGCTGCACGAAGGTGTGCATGTGACCGCCCAGTTTGGAGCCACAGACCT	7	-	18723904-18723953	7qA3	Mus musculus gem (nuclear organelle) associated protein 7 (Gemin7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI461688; AI120175; 2400008I04Rik	AI461688; AI120175; 2400008I04Rik
Mus musculus	RefSeq	ILMN_191875	ILMN_239376	EG664821	XM_972876.2	XM_972876.2		664821	149268469	XM_972876.2	EG664821	XP_977970.2	ILMN_1259172	000650053	S	920	CAGTCACAGAAGTGATGAAGCATCCCTGGCTCAAAGGCTACTGCAAAGGG	17	-	14137926-14137975	17qA2	PREDICTED: Mus musculus predicted gene, EG664821 (EG664821), mRNA.					
Mus musculus	RefSeq	ILMN_257640	ILMN_257640	GTF2IRD1	NM_001081462.1	NM_001081462.1		57080	125625330	NM_001081462.1	Gtf2ird1	NP_001074931.1	ILMN_3096468	005550356	A	3203	CGTCTGCAACAATGCCAAGGTGCCAGCCAAAGACAACATTCCCAAGCGCA	5	-	134865586-134865602:134866692-134866724	5qG2	Mus musculus general transcription factor II I repeat domain-containing 1 (Gtf2ird1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	WBSCR11; BEN; MGC102438; ESTM9; MusTRD1; 1700012P16Rik; Cream1; Gtf2il; X83320; GTF3	WBSCR11; BEN; MGC102438; ESTM9; MusTRD1; 1700012P16Rik; Cream1; Gtf2il; X83320; GTF3
Mus musculus	RefSeq	ILMN_186100	ILMN_257640	GTF2IRD1	NM_001081462.1	NM_001081462.1		57080	125625330	NM_001081462.1	Gtf2ird1	NP_001074931.1	ILMN_2589686	004150341	S	2551	GACATGAAGCTGGGAAAACCACCAGACCAAGGAGACTGCAACAGGACACC	5	-	134871689-134871691:134877981-134878027	5qG2	Mus musculus general transcription factor II I repeat domain-containing 1 (Gtf2ird1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	WBSCR11; BEN; MGC102438; ESTM9; MusTRD1; 1700012P16Rik; Cream1; Gtf2il; X83320; GTF3	WBSCR11; BEN; MGC102438; ESTM9; MusTRD1; 1700012P16Rik; Cream1; Gtf2il; X83320; GTF3
Mus musculus	RefSeq	ILMN_206668	ILMN_311763	LOC100043798	XM_001481083.1	XM_001481083.1		100043798	149256687	XM_001481083.1	LOC100043798	XP_001481133.1	ILMN_1251672	006060292	S	1192	GTGTTTGTGCCAGGCCTCATCCGGTCTTCAGGAGACTGAAGCATGCAGAC	7	+	30837177-30837226	7qB1	PREDICTED: Mus musculus hypothetical protein LOC100043798 (LOC100043798), mRNA.					
Mus musculus	RefSeq	ILMN_210910	ILMN_210910	HIGD2A	NM_025933.3	NM_025933.3		67044	146135032	NM_025933.3	Higd2a	NP_080209.1	ILMN_1255823	003120162	S	433	CCTCCGTTTCAGACCGGACCTTATTGTCATTTGGGTGAGGAAGTGGCCGA				13qB1	Mus musculus HIG1 domain family, member 2A (Higd2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2010110M21Rik; AA690237	2010110M21Rik; AA690237
Mus musculus	RefSeq	ILMN_194159	ILMN_233454	UGCGL2	NM_001081252.1	NM_001081252.1		66435	124486936	NM_001081252.1	Ugcgl2	NP_001074721.1	ILMN_1233020	002260762	S	3582	AGGAGCAGAACCCGAGACCAACGTAGGCAATGTCATCGTCGTGTTAAACA	14	-	119413773-119413822	14qE4	Mus musculus UDP-glucose ceramide glucosyltransferase-like 2 (Ugcgl2), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	AW047562; 3110027P15Rik; 3110001A05Rik; A230065J02Rik; 1810064L21Rik	AW047562; 3110027P15Rik; 3110001A05Rik; A230065J02Rik; 1810064L21Rik
Mus musculus	RefSeq	ILMN_205539	ILMN_233454	UGCGL2	NM_001081252.1	NM_001081252.1		66435	124486936	NM_001081252.1	Ugcgl2	NP_001074721.1	ILMN_2573330	003780564	S	1066	GACATCTCACAGAACTTTCCTGTAAAAGCCAGGACTCTCACCAGGATTGC	14	-	119474595-119474613:119476874-119476904	14qE4	Mus musculus UDP-glucose ceramide glucosyltransferase-like 2 (Ugcgl2), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	AW047562; 3110027P15Rik; 3110001A05Rik; A230065J02Rik; 1810064L21Rik	AW047562; 3110027P15Rik; 3110001A05Rik; A230065J02Rik; 1810064L21Rik
Mus musculus	RefSeq	ILMN_204417	ILMN_233454	UGCGL2	NM_001081252.1	NM_001081252.1		66435	124486936	NM_001081252.1	Ugcgl2	NP_001074721.1	ILMN_1228406	002060703	S	1282	CTGCTGAGTGGCCTTAAAAGTCTTGGGCTCAGTGAAGAAGAGAGGAACAG	14	-	119460531-119460580	14qE4	Mus musculus UDP-glucose ceramide glucosyltransferase-like 2 (Ugcgl2), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	AW047562; 3110027P15Rik; 3110001A05Rik; A230065J02Rik; 1810064L21Rik	AW047562; 3110027P15Rik; 3110001A05Rik; A230065J02Rik; 1810064L21Rik
Mus musculus	RefSeq	ILMN_201680	ILMN_233454	UGCGL2	NM_001081252.1	NM_001081252.1		66435	124486936	NM_001081252.1	Ugcgl2	NP_001074721.1	ILMN_1213470	007210753	S	4670	GATGAAACGTGATAAAAATCCGCCACCTGCTGGAGACCTGTGGAACTGCC	14	-	119386049-119386098	14qE4	Mus musculus UDP-glucose ceramide glucosyltransferase-like 2 (Ugcgl2), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	AW047562; 3110027P15Rik; 3110001A05Rik; A230065J02Rik; 1810064L21Rik	AW047562; 3110027P15Rik; 3110001A05Rik; A230065J02Rik; 1810064L21Rik
Mus musculus	RefSeq	ILMN_215023	ILMN_215023	AI593442	NM_177907.2	NM_177907.2		330941	31342698	NM_177907.2	AI593442	NP_808575.1	ILMN_2733828	006250026	S	1769	CCCCTTCCAAGAAGCAGCCTGCACACCCTAGGGGGCAATGTCCTACATAC	9	-	52483089-52483138	9qA5.3	Mus musculus expressed sequence AI593442 (AI593442), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC130101; E130102D23	MGC130101; E130102D23
Mus musculus	RefSeq	ILMN_215023	ILMN_215023	AI593442	NM_177907.2	NM_177907.2		330941	31342698	NM_177907.2	AI593442	NP_808575.1	ILMN_1246403	006100600	S	2295	CCCGTCAAACTAATTGCTCCAACCTTCTATAGCTACAGCTCAGCTCCTGC	9	-	52482563-52482612	9qA5.3	Mus musculus expressed sequence AI593442 (AI593442), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC130101; E130102D23	MGC130101; E130102D23
Mus musculus	RefSeq	ILMN_215023	ILMN_215023	AI593442	NM_177907.2	NM_177907.2		330941	31342698	NM_177907.2	AI593442	NP_808575.1	ILMN_2654624	004230768	S	441	TAGGCCTGGCTTCTGCTGTTTCCGGAAGTGTTCTTTTGTATTTTACGCTG	9	-	52484417-52484466	9qA5.3	Mus musculus expressed sequence AI593442 (AI593442), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC130101; E130102D23	MGC130101; E130102D23
Mus musculus	Riken	ILMN_202162	ILMN_202162	PIGN	ri|3110041M09|ZX00071F16|AK014165|1362					AK014165	Pign		ILMN_2547482	006250347	S	331	TTTCAAGATCAAGCTTCTCTTGCAGGTAGCCCAGTGTGGATATGCTGCTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211332	ILMN_211332	EFNA3	scl21946.5_137	XM_204001.3			38077571	XM_204001.3	Efna3		ILMN_1220598	007000039	S	1231	GGACTGTGGTTTGGATTGAATCCAAGTTTACAAATAGACACCCCTGGGGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211907	ILMN_211907	IGF2BP2	NM_183029.1	NM_183029.1		319765	33942111	NM_183029.1	Igf2bp2	NP_898850.1	ILMN_2974720	004570184	S	4682	GTGTGCCGCAGCTCTTCTGTCTTCCGCTAGCCAAGAGCCTACGTGGCCTT	16	-	22059348-22059397	16qB1	Mus musculus insulin-like growth factor 2 mRNA binding protein 2 (Igf2bp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	IMP-2; Imp2; C330012H03Rik; Neilsen	IMP-2; Imp2; C330012H03Rik; Neilsen
Mus musculus	Riken	ILMN_203650	ILMN_203650	UNC5H3	ri|9430006E08|PX00107L12|AK034558|3052					AK034558	Unc5h3		ILMN_1231621	003800239	S	2984	CATTCTGGCCATTTGTTGGTCGGTTACTCGGTTTCAGTAATGGGACAGCC										
Mus musculus	RefSeq	ILMN_222410	ILMN_222410	1600029D21RIK	NM_029639.2	NM_029639.2		76509	124286796	NM_029639.2	1600029D21Rik	NP_083915.2	ILMN_1259777	001300092	S	1169	GTGACTGTAGGAAAAAGAGAAATGAGTGATCATCCTGTGGCTACTAGCAG	9	+	50313067-50313116	9qA5.3	Mus musculus RIKEN cDNA 1600029D21 gene (1600029D21Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA407923; 0610037B23Rik; PLET1; AU043048	AA407923; 0610037B23Rik; PLET1; AU043048
Mus musculus	RefSeq	ILMN_220531	ILMN_257799	C1QTNF2	NM_026979.3	NM_026979.3		69183	146141110	NM_026979.3	C1qtnf2	NP_081255.1	ILMN_1232458	001990307	S	885	ACTCAGAGCAGAATGGCCTCTTCTACGACCCTTACTGGACCGACAGCCTG				11qB1.1	Mus musculus C1q and tumor necrosis factor related protein 2 (C1qtnf2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen [goid 45725] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of fatty acid oxidation [goid 46321] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46326] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]	1810033K05Rik; CTRP2; RP23-26M1.6	1810033K05Rik; CTRP2; RP23-26M1.6
Mus musculus	RefSeq	ILMN_209078	ILMN_209078	PSENEN	NM_025498.2	NM_025498.2		66340	31981294	NM_025498.2	Psenen	NP_079774.1	ILMN_2592313	007510332	S	220	ACTTGGAGCGGGTATCCAATGAGGAGAAGTTGAACCTGTGCCGGAAGTAC	7	-	31347821-31347870	7qB1	Mus musculus presenilin enhancer 2 homolog (C. elegans) (Psenen), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700023M09Rik; MGC102026	1700023M09Rik; MGC102026
Mus musculus	RefSeq	ILMN_243320	ILMN_243320	ZCCHC16	NM_001033795.2	NM_001033795.2		619287	124486591	NM_001033795.2	Zcchc16	NP_001028967.2	ILMN_2992378	003120377	S	1534	TCATTGGCCCCGTGCGTCCACTACCAAAGGATGGGCCTAGACAGTTGCAG				XqF2	Mus musculus zinc finger, CCHC domain containing 16 (Zcchc16), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Mar4; C230031A03Rik	Mar4; C230031A03Rik
Mus musculus	RefSeq	ILMN_197860	ILMN_226451	LOC677558	XR_005088.1	XR_005088.1		677558	94410700	XR_005088.1	LOC677558		ILMN_1224066	007100528	S	646	GCATACTGCCAACCTCACAAAGCTGACCCTGGAGAAGTACCCTGCCCCTA					PREDICTED: Mus musculus hypothetical LOC677558 (LOC677558), misc RNA.					
Mus musculus	RefSeq	ILMN_210895	ILMN_231981	PGS1	NM_133757.2	NM_133757.2		74451	142367139	NM_133757.2	Pgs1	NP_598518.1	ILMN_1223307	000360403	S	2200	CACTATCTGCCCTTAGCCAGACTGCTGTTGTCTCTTATCCTAGCCAATGG	11	+	117885227-117885276	11qE2	Mus musculus phosphatidylglycerophosphate synthase 1 (Pgs1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Catalysis of the reaction: CDP-diacylglycerol + glycerol 3-phosphate = CMP + 3-(3-phosphatidyl)-glycerol 1-phosphate [goid 8444] [evidence IEA]	SAF; RP23-268N22.7; 2610019F11Rik; 4933424M23Rik	SAF; RP23-268N22.7; 2610019F11Rik; 4933424M23Rik
Mus musculus	RefSeq	ILMN_230390	ILMN_230390	CNOT6	NM_212484.1	NM_212484.1		104625	47059014	NM_212484.1	Cnot6	NP_997649.1	ILMN_3034098	002120037	I	268	ACTGGTATGGTGGTTCCACAGGGCAGACCCCGCTGCACTCATCGGGAGGA	11	-	49525895-49525944	11qB1.2	Mus musculus CCR4-NOT transcription complex, subunit 6 (Cnot6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA407540; A230103N10Rik; CCR4; MGC98472; AW456442	AA407540; A230103N10Rik; CCR4; MGC98472; AW456442
Mus musculus	RefSeq	ILMN_197668	ILMN_197668	LOC381475	XM_358592.1	XM_358592.1			38077235	XM_358592.1	LOC381475		ILMN_2528937	006420092	S	349	GCCTTCTGGCCTCCGTGGGCAACAGATGGACACCAATACTTCTGGATTTA										
Mus musculus	RefSeq	ILMN_212001	ILMN_212001	COL4A1	NM_009931.1	NM_009931.1		12826	33859527	NM_009931.1	Col4a1	NP_034061.1	ILMN_2621643	004060102	S	6102	GACTGAATGACTGACTTCCCGTACGACAGCCAAGGCCTTTGTTAGCCTCC	8	-	11198790-11198839	8qA1.1	Mus musculus procollagen, type IV, alpha 1 (Col4a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]	Del(8)44H; Raw; Svc; Col4a-1; Bru	Del(8)44H; Raw; Svc; Col4a-1; Bru
Mus musculus	RefSeq	ILMN_220952	ILMN_237374	LRRC27	NM_027164.1	NM_027164.1		76612	60650307	NM_027164.1	Lrrc27	NP_081440.1	ILMN_2729078	001090452	S	1329	CAGTTCATGCAAACAGGATGGAAGACACTCACAAGGCGGCTCTTCAGGAG	7	+	146413878-146413927	7qF4	Mus musculus leucine rich repeat containing 27 (Lrrc27), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700071K18Rik; 2310044E02Rik	1700071K18Rik; 2310044E02Rik
Mus musculus	RefSeq	ILMN_220952	ILMN_237374	LRRC27	NM_027164.1	NM_027164.1		76612	60650307	NM_027164.1	Lrrc27	NP_081440.1	ILMN_1247028	000430072	S	1792	GGAGATGACCTTGAACAAAGACCATCCATTTCCATCTTTCACTGGAAACC	7	+	146428557-146428606	7qF4	Mus musculus leucine rich repeat containing 27 (Lrrc27), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700071K18Rik; 2310044E02Rik	1700071K18Rik; 2310044E02Rik
Mus musculus	RefSeq	ILMN_209372	ILMN_209372	OLFR1471	NM_207132.2	NM_207132.2		258231	112821661	NM_207132.2	Olfr1471	NP_997015.2	ILMN_2910447	003850204	S	567	CACCCACACAAATGAGATTACACTGCTTGTCTTGGCTACATTGGATGTTG	19	+	13520070-13520119	19qA	Mus musculus olfactory receptor 1471 (Olfr1471), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR202-38	MOR202-38
Mus musculus	RefSeq	ILMN_199112	ILMN_259302	COQ10A	NM_001081040.1	NM_001081040.1		210582	124486651	NM_001081040.1	Coq10a	NP_001074509.1	ILMN_1244527	002710451	S	2203	CCAGGGCTGTCACCGTCTCTGTGCCTGGTCGGGGGAATACAGTAGTAACT	10	-	127800407-127800456	10qD3	Mus musculus coenzyme Q10 homolog A (yeast) (Coq10a), mRNA.				Gm1	Gm1
Mus musculus	RefSeq	ILMN_239222	ILMN_231674	SLC16A3	NM_001038654.1	NM_001038654.1		80879	84697027	NM_001038654.1	Slc16a3	NP_001033743.1	ILMN_3163569	002750025	A	2238	GCCACAGCATTCATACAGCAGGAAGAAAGGGGGAGAGGGGAATAGCAAGG	11	+	120820166-120820215	11qE2	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 3 (Slc16a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism [goid 15355] [evidence IEA]	Mct4; Mct3	Mct4; Mct3
Mus musculus	RefSeq	ILMN_190743	ILMN_248027	EPS15	NM_007943.2	NM_007943.2		13858	142375587	NM_007943.2	Eps15	NP_031969.1	ILMN_1228338	005900278	S	2822	CAGCAGTACAGTGCTCTCTGGAACACTGAAGCTATTTACCATGTGCATCA	4	+	109058089-109058138	4qC7	Mus musculus epidermal growth factor receptor pathway substrate 15 (Eps15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	2410112D09Rik	2410112D09Rik
Mus musculus	MEEBO	ILMN_189028	ILMN_189028	A930010C08RIK	scl077943.1_53						A930010C08Rik		ILMN_2457731	006980270	S	4	GGCTGTTTCGTCGCTCGTCGCTTTGCGGGCCCCTGGCGCTCACTCTCTAA										
Mus musculus	RefSeq	ILMN_212547	ILMN_212547	HNRPL	NM_177301.4	NM_177301.4		15388	118130380	NM_177301.4	Hnrpl	NP_796275.2	ILMN_2627690	007380274	S	1707	CGTACCCATACACTCTGAAGTTGTGCTTCTCCACTGCACAGCACGCCTCC	7	+	29606873-29606922	7qA3	Mus musculus heterogeneous nuclear ribonucleoprotein L (Hnrpl), mRNA.				D830027H13Rik; C79783	D830027H13Rik; C79783
Mus musculus	RefSeq	ILMN_199177	ILMN_324412	LOC432554	XR_031980.1	XR_031980.1		432554	149262059	XR_031980.1	LOC432554		ILMN_1253539	007100224	S	2283	ATGCGTATCCTGCTACCGCAGCTGCTGCGCCTATGATTGGCTATCCCGTG				11qB1.2	PREDICTED: Mus musculus similar to Ddx5 protein (LOC432554), misc RNA.					
Mus musculus	RefSeq	ILMN_213562	ILMN_213562	PRDX2	NM_011563.2	NM_011563.2		21672	31560538	NM_011563.2	Prdx2	NP_035693.2	ILMN_2638354	001690753	S	1019	GCTTGTGCAACTGACTCTGTAGTTATGCCTCTTCACCACAAGGTGGAGGC	8	+	87864469-87864518	8qC3	Mus musculus peroxiredoxin 2 (Prdx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions involving hydrogen peroxide [goid 10310] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling in response to detection of lipopolysaccharide [goid 31665] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 10671] [evidence IMP]; A phase of elevated metabolic activity, during which oxygen consumption increases following a stimulus during an acute inflammatory response; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals, resulting in an increase in their intracellular or extracellular levels [goid 2536] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell differentiation [goid 45581] [evidence IMP]; The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 42743] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence TAS]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence TAS]; Catalysis of the reaction: thioredoxin + H2O2 = thioredoxin disulfide + H2O [goid 8379] [evidence TAS]; Catalysis of the reaction: thioredoxin + H2O2 = thioredoxin disulfide + H2O [goid 8379] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	Band-8; TPx-B; PrxII; TR; TSA; PRP; NkefB; TDX1; Tdpx1; Torin; AL022839; TPx	Band-8; TPx-B; PrxII; TR; TSA; PRP; NkefB; TDX1; Tdpx1; Torin; AL022839; TPx
Mus musculus	RefSeq	ILMN_213562	ILMN_213562	PRDX2	NM_011563.2	NM_011563.2		21672	31560538	NM_011563.2	Prdx2	NP_035693.2	ILMN_1242829	007400112	S	1091	CTGAGCATGGTGGGACACAGTGAGACCAAATAATTACTAGGCCTGGAGGG	8	+	87864541-87864590	8qC3	Mus musculus peroxiredoxin 2 (Prdx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions involving hydrogen peroxide [goid 10310] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling in response to detection of lipopolysaccharide [goid 31665] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 10671] [evidence IMP]; A phase of elevated metabolic activity, during which oxygen consumption increases following a stimulus during an acute inflammatory response; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals, resulting in an increase in their intracellular or extracellular levels [goid 2536] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell differentiation [goid 45581] [evidence IMP]; The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 42743] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence TAS]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence TAS]; Catalysis of the reaction: thioredoxin + H2O2 = thioredoxin disulfide + H2O [goid 8379] [evidence TAS]; Catalysis of the reaction: thioredoxin + H2O2 = thioredoxin disulfide + H2O [goid 8379] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	Band-8; TPx-B; PrxII; TR; TSA; PRP; NkefB; TDX1; Tdpx1; Torin; AL022839; TPx	Band-8; TPx-B; PrxII; TR; TSA; PRP; NkefB; TDX1; Tdpx1; Torin; AL022839; TPx
Mus musculus	Riken	ILMN_203060	ILMN_203060	B230112L11RIK	ri|B230112L11|PX00068M07|AK045394|2362					AK045394	B230112L11Rik		ILMN_1234403	006290070	S	1988	TGCAGCCACAGAGCAAGGATGGGGTAGGGTCGTAGAGACGGGCAGATCCT										
Mus musculus	Riken	ILMN_203247	ILMN_203247	E430024F02RIK	ri|E430024F02|PX00100E13|AK088719|1921					AK088719	E430024F02Rik		ILMN_1228408	004040458	S	961	TTGTGAACATTTTGGGTTTGCTGCAACCTCACTTAGAGAGGGTTGCCATC										
Mus musculus	MEEBO	ILMN_189913	ILMN_189913	IGH-VS107	scl0016065.1_275				38073848	XM_354717	Igh-VS107		ILMN_1217128	003120301	S	20	GCAAGAGATTACTACGGTAGTAGCTACTGGTACTTCGATGTCTGGGGCGC										
Mus musculus	RefSeq	ILMN_190674	ILMN_259483	CCDC86	NM_023731.2	NM_023731.2		108673	142357952	NM_023731.2	Ccdc86	NP_076220.1	ILMN_2730003	007330424	S	1474	CCCCATCTCCTTTCCCGCCTGTTCCAAAGTGCCTTATAGTCATAAACTGT	19	-	11017450-11017499	19qA	Mus musculus coiled-coil domain containing 86 (Ccdc86), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			6720480F16Rik; D19Ertd678e; 4933411H20Rik	6720480F16Rik; D19Ertd678e; 4933411H20Rik
Mus musculus	RefSeq	ILMN_217959	ILMN_217959	PLEKHO1	NM_023320.2	NM_023320.2		67220	118129883	NM_023320.2	Plekho1	NP_075809.1	ILMN_2689809	007200653	S	813	GAAGAAGTTCCCCAGTACAGAGAAGAGCCGATGTGCCTCCCTGGAGGAGA	3	-	95793258-95793307	3qF2.1	Mus musculus pleckstrin homology domain containing, family O member 1 (Plekho1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		2810052M02Rik; JZA-20; Jza2; Ckip1; MGC151380	2810052M02Rik; JZA-20; Jza2; Ckip1; MGC151380
Mus musculus	Riken	ILMN_202295	ILMN_202295	4933403O12RIK	ri|4933403O12|PX00019I13|AK016645|2070					AK016645	4933403O12Rik		ILMN_2548484	005870719	S	167	AAGTGTAGAGGCTGGAGAAAGGGTAAGGGCATGAAGCGGGGAGAAACTGC										
Mus musculus	Riken	ILMN_201636	ILMN_201636	1110012F10RIK	ri|1110012F10|R000016K01|AK003630|1689					AK003630	1110012F10Rik		ILMN_1243561	002070707	S	1394	GCTCCAGTGGTAGACTCTGACAGGTGGGAGGATACAGTGCTCTGGGCTGT										
Mus musculus	Riken	ILMN_203387	ILMN_203387	4933402K11RIK	ri|4933402K11|PX00019K15|AK030155|1570					AK030155	4933402K11Rik		ILMN_1259888	006900427	S	1077	GGGGTGGGGTTCCTTGTTTCAGCCAACAGGACCAGCCTCTATTCCACTTG										
Mus musculus	RefSeq	ILMN_199265	ILMN_199265	LOC270498	XM_193497.2	XM_193497.2			38093563	XM_193497.2	LOC270498		ILMN_2534625	006330014	S	106	GAGATCAATGCCATGGCCTATGATCGCTACGTGGCCATCTGTCATCCCCT										
Mus musculus	RefSeq	ILMN_218337	ILMN_260086	MAGEL2	XM_622091.3	XM_622091.3		27385	94380522	XM_622091.3	Magel2	XP_622091.2	ILMN_2694539	007100112	S	4581	TGGATGTTAATATGACTCATCGGTAAAATACTGTCTGGAGAAAAGTAAAG	7	+	69526445-69526494	7qC	PREDICTED: Mus musculus melanoma antigen, family L, 2 (Magel2), mRNA.		Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_213533	ILMN_241923	ALDH8A1	NM_178713.4	NM_178713.4		237320	119637817	NM_178713.4	Aldh8a1	NP_848828.1	ILMN_2771641	003440689	S	891	GGGGAGATTTGCCTTTGTACCAGTAGAATCTTTGTCCAGAGAAGCATCTA	10	+	21111373-21111422	10qA3	Mus musculus aldehyde dehydrogenase 8 family, member A1 (Aldh8a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A [goid 42574] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal [goid 1758] [evidence IDA]	Raldh4	Raldh4
Mus musculus	RefSeq	ILMN_213533	ILMN_241923	ALDH8A1	NM_178713.4	NM_178713.4		237320	119637817	NM_178713.4	Aldh8a1	NP_848828.1	ILMN_1226247	006510201	S	920	CTTTGTCCAGAGAAGCATCTACAGTGAATTTCTGAAGAGGTTTGTGGAAG	10	+	21111402-21111451	10qA3	Mus musculus aldehyde dehydrogenase 8 family, member A1 (Aldh8a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A [goid 42574] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal [goid 1758] [evidence IDA]	Raldh4	Raldh4
Mus musculus	RefSeq	ILMN_213533	ILMN_241923	ALDH8A1	NM_178713.4	NM_178713.4		237320	119637817	NM_178713.4	Aldh8a1	NP_848828.1	ILMN_2775723	003390136	S	1587	CAGTCATGCCGCTGCTTGCCAGGAGACTGGCTCTCAATGACCACTGATGG	10	+	21115728-21115777	10qA3	Mus musculus aldehyde dehydrogenase 8 family, member A1 (Aldh8a1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A [goid 42574] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal [goid 1758] [evidence IDA]	Raldh4	Raldh4
Mus musculus	RefSeq	ILMN_218415	ILMN_218415	PTGDR	NM_008962.3	NM_008962.3		19214	142357272	NM_008962.3	Ptgdr	NP_032988.2	ILMN_1247634	004200187	S	3100	GTGTGTCCTAGTTTTAGAAGGTATGCTATGGTAACTGTCTAGAGAATTTG	14	-	45470947-45470996	14qC1	Mus musculus prostaglandin D receptor (Ptgdr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a thromboxane (TXA) to initiate a change in cell activity [goid 4960] [evidence IEA]; Combining with prostaglandin D (PGD(2)) to initiate a change in cell activity [goid 4956] [evidence IDA]; Combining with prostaglandin J (PGJ(2)), a metabolite of prostaglandin D (PGD(2)) to initiate a change in cell activity [goid 1785] [evidence IDA]	PGD; DP	PGD; DP
Mus musculus	RefSeq	ILMN_209368	ILMN_209368	ATG3	NM_026402.3	NM_026402.3		67841	146135018	NM_026402.3	Atg3	NP_080678.1	ILMN_2595188	002650164	S	1286	ATTGACCATATTTACCAATAAGAATAATTTCTCTAATAATGGGATTATAT				16qB5	Mus musculus autophagy-related 3 (yeast) (Atg3), mRNA.	A ubiquitin ligase complex found in the cytoplasm [goid 153] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence ISO]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence ISO]	PC3-96; APG3; Atg3l; Apg3l; 2610016C12Rik	PC3-96; APG3; Atg3l; Apg3l; 2610016C12Rik
Mus musculus	RefSeq	ILMN_209368	ILMN_209368	ATG3	NM_026402.3	NM_026402.3		67841	146135018	NM_026402.3	Atg3	NP_080678.1	ILMN_2651781	003120253	S	871	CGACCTGTACATCACTTACGACAAATATTACCAGACACCACGGCTATGGT				16qB5	Mus musculus autophagy-related 3 (yeast) (Atg3), mRNA.	A ubiquitin ligase complex found in the cytoplasm [goid 153] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence ISO]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence ISO]	PC3-96; APG3; Atg3l; Apg3l; 2610016C12Rik	PC3-96; APG3; Atg3l; Apg3l; 2610016C12Rik
Mus musculus	RefSeq	ILMN_201905	ILMN_221575	CCDC50	NM_026202.2	NM_026202.2		67501	71043974	NM_026202.2	Ccdc50	NP_080478.2	ILMN_1216920	005260528	S	897	GACCACCACCACCTACCATGATGGGCCTTGAGGACACAGATCCCACCCAT	16	+	27438463-27438463:27444630-27444678	16qB2	Mus musculus coiled-coil domain containing 50 (Ccdc50), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C3orf6; AW048328; 2610529H08Rik	C3orf6; AW048328; 2610529H08Rik
Mus musculus	RefSeq	ILMN_221575	ILMN_221575	CCDC50	NM_026202.2	NM_026202.2		67501	71043974	NM_026202.2	Ccdc50	NP_080478.2	ILMN_2737381	005360653	S	1704	GTATAGACTTTAATTGTCTGATACTTTCTCTCAGGTCCATGAGGCGTCAA	16	+	27447033-27447082	16qB2	Mus musculus coiled-coil domain containing 50 (Ccdc50), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C3orf6; AW048328; 2610529H08Rik	C3orf6; AW048328; 2610529H08Rik
Mus musculus	RefSeq	ILMN_220951	ILMN_220951	OLFR266	NM_146489.1	NM_146489.1		258482	33239315	NM_146489.1	Olfr266	NP_666700.1	ILMN_2924309	006900681	S	762	TTATGGAACACTGATTGCCACCTATCTTGTGCCCTCAGCCAACTCTTCCC	3	-	106624664-106624713	3qF2.3	Mus musculus olfactory receptor 266 (Olfr266), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR122-2	MOR122-2
Mus musculus	RefSeq	ILMN_211875	ILMN_211875	RALB	NM_022327.4	NM_022327.4		64143	142352448	NM_022327.4	Ralb	NP_071722.1	ILMN_2620336	001230747	S	1946	TGTTTAGGTGCCGAATGTGAATCTGGGTGGGGAGAGCGGGAGCCCTTCGA	1	-	121367009-121367058	1qE2.3	Mus musculus v-ral simian leukemia viral oncogene homolog B (ras related) (Ralb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	5730472O18Rik	5730472O18Rik
Mus musculus	RefSeq	ILMN_187298	ILMN_251475	LSM14B	NM_177727.4	NM_177727.4		241846	148839332	NM_177727.4	Lsm14b	NP_808395.2	ILMN_2613313	006620626	S	1412	GAAGGCAACACTACAGTCAGCAGGAGAAGTGAACCTTGTGTACCAGCCTG				2qH4	Mus musculus LSM14 homolog B (SCD6, S. cerevisiae) (Lsm14b), mRNA.				BC040823; 9430078B04	BC040823; 9430078B04
Mus musculus	RefSeq	ILMN_187298	ILMN_251475	LSM14B	NM_177727.4	NM_177727.4		241846	148839332	NM_177727.4	Lsm14b	NP_808395.2	ILMN_2442914	006590717	S	2388	AGCCACAGAGCTTTGGTTCTGTACTGATGAAGCCACAGCGTGAAAGCTTG				2qH4	Mus musculus LSM14 homolog B (SCD6, S. cerevisiae) (Lsm14b), mRNA.				BC040823; 9430078B04	BC040823; 9430078B04
Mus musculus	RefSeq	ILMN_213364	ILMN_213364	SFRS2	NM_011358.1	NM_011358.1		20382	6755477	NM_011358.1	Sfrs2	NP_035488.1	ILMN_1235653	001710044	S	434	GCCCGCCCGACTCGCACCACAGCCGCCGGGGCCCGCCACCCCGTCGGTAC	11	-	116713913-116713962	11qE2	Mus musculus splicing factor, arginine/serine-rich 2 (SC-35) (Sfrs2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pr264; D11Wsu175e; MRF-1; SC35; Sfrs10	Pr264; D11Wsu175e; MRF-1; SC35; Sfrs10
Mus musculus	RefSeq	ILMN_213364	ILMN_213364	SFRS2	NM_011358.1	NM_011358.1		20382	6755477	NM_011358.1	Sfrs2	NP_035488.1	ILMN_2806029	007550292	S	1673	ACCCCCCTTCCCTCAAAAAATGCAAAATGGTAAATCTGATCATCCTTGTG	11	-	116711379-116711428	11qE2	Mus musculus splicing factor, arginine/serine-rich 2 (SC-35) (Sfrs2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pr264; D11Wsu175e; MRF-1; SC35; Sfrs10	Pr264; D11Wsu175e; MRF-1; SC35; Sfrs10
Mus musculus	RefSeq	ILMN_213364	ILMN_213364	SFRS2	NM_011358.1	NM_011358.1		20382	6755477	NM_011358.1	Sfrs2	NP_035488.1	ILMN_2636335	005130612	S	1574	CAGTTTATTAAAATGCCTGACAACTGCACTTCCAGTCACCCGGGCCTTGC	11	-	116711478-116711527	11qE2	Mus musculus splicing factor, arginine/serine-rich 2 (SC-35) (Sfrs2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pr264; D11Wsu175e; MRF-1; SC35; Sfrs10	Pr264; D11Wsu175e; MRF-1; SC35; Sfrs10
Mus musculus	RefSeq	ILMN_213083	ILMN_310741	LOC100041452	XM_001473177.1	XM_001473177.1		100041452	149275194	XM_001473177.1	LOC100041452	XP_001473227.1	ILMN_2633394	002630196	S	301	CGACGTGGAAATTAGAGTCCAGGAACATATACTGGGCAACAGATGGGACT	Un|NT_166433.1	+	16765-16814		PREDICTED: Mus musculus similar to T-cell leukemia protein Tcl1b1 (LOC100041452), mRNA.					
Mus musculus	RefSeq	ILMN_195868	ILMN_195868	ZFP109	NM_020262.1	NM_020262.1		56869	9931981	NM_020262.1	Zfp109	NP_064658.1	ILMN_2982308	004390154	S	2440	GTGCAGCGAATCTCTAGGTTTGTTCTGCTGTCGGGTGGGCTCCATGCTGC	7	-	25013033-25013066:25013067-25013082	7qA3	Mus musculus zinc finger protein 109 (Zfp109), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC141452	MGC141452
Mus musculus	MEEBO	ILMN_192614	ILMN_192614	TBL2	scl27136.8_22				31543844	NM_013763	Tbl2		ILMN_2604643	006380500	S	4124	TCTTGCTTCTGCACTCGTGTCTTGAGAAGTAACTGGTGCCGTGGCTGCAC										
Mus musculus	MEEBO	ILMN_192614	ILMN_192614	TBL2	scl27136.8_22				31543844	NM_013763	Tbl2		ILMN_1255699	000940292	S	1	GGGCTTGGCAGGTTGAAGAACCACGAGTCAGCACTGCATAGACTGTCTAA										
Mus musculus	MEEBO	ILMN_214558	ILMN_214558	EPB4.2	scl18770.14.1_143	NM_013513.1			7305034	NM_013513.1	Epb4.2		ILMN_2649240	006650369	S	3303	GTAGTTGGAAACAATGTATCAAATTTTTTGTCTAAATTATAAATTCATGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IEA]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of ions within an organism or cell [goid 50801] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions [goid 55072] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The chemical reactions and pathways involving hemoglobin, including its uptake and utilization [goid 20027] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193723	ILMN_238165	ZFP324	NM_178732.3	NM_178732.3		243834	56118255	NM_178732.3	Zfp324	NP_848847.3	ILMN_2687195	004210019	S	3302	GTGAGGGAGGGCAGATGGGTGCTTGGGATTCAGTTTGCTTGTTGCGGCCT	7	+	13558184-13558233	7qA1	Mus musculus zinc finger protein 324 (Zfp324), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D430030K24Rik; ZF5128; A930002M05	D430030K24Rik; ZF5128; A930002M05
Mus musculus	RefSeq	ILMN_186725	ILMN_237290	LOC638301	XM_914287.2	XM_914287.2		638301	149274739	XM_914287.2	LOC638301	XP_919380.2	ILMN_1257771	006450259	S	174	GGAAGGAGATAAGCTCCACCTCTTCTGCTTTCACCTGAAAAGAGAAAGAG					PREDICTED: Mus musculus similar to interferon activated gene 204 (LOC638301), mRNA.					
Mus musculus	RefSeq	ILMN_191108	ILMN_317771	LOC100040538	XM_001474881.1	XM_001474881.1		100040538	149272255	XM_001474881.1	LOC100040538	XP_001474931.1	ILMN_2678486	000940255	S	458	ACAAAGCCGCAGTCCTCTCTGTATTCGTGAGGCTCCCTCGAGGACTGGGA	X	+	125085869-125085918	XqE3	PREDICTED: Mus musculus similar to attractin (LOC100040538), mRNA.					
Mus musculus	RefSeq	ILMN_217586	ILMN_217586	ITGB3BP	NM_026348.3	NM_026348.3		67733	142343818	NM_026348.3	Itgb3bp	NP_080624.1	ILMN_1213858	001190707	S	131	CCTACTACTGGAACTTATCAGTTGAGCCCATTTTCTTCTCCCGCAACCCC	4	-	99468822-99468871	4qC6	Mus musculus integrin beta 3 binding protein (beta3-endonexin) (Itgb3bp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AU022583; 4930471O16Rik	AU022583; 4930471O16Rik
Mus musculus	RefSeq	ILMN_217586	ILMN_217586	ITGB3BP	NM_026348.3	NM_026348.3		67733	142343818	NM_026348.3	Itgb3bp	NP_080624.1	ILMN_2746021	007150091	S	2595	ATTCAAGCTAACTGCCTTCTAGGTTTTCAGGAACTATTTAAGCAAGGTTC	4	-	99432186-99432235	4qC6	Mus musculus integrin beta 3 binding protein (beta3-endonexin) (Itgb3bp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AU022583; 4930471O16Rik	AU022583; 4930471O16Rik
Mus musculus	RefSeq	ILMN_216563	ILMN_216563	GPR89	NM_026229.3	NM_026229.3		67549	146134974	NM_026229.3	Gpr89	NP_080505.1	ILMN_2672544	006770168	S	1542	AGGCACACGCCTACTTCCTCCTGAGATACTGGAGTCACTTCGACTGAGGC				3qF2.1	Mus musculus G protein-coupled receptor 89 (Gpr89), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			SH120; 4933412D19Rik	SH120; 4933412D19Rik
Mus musculus	RefSeq	ILMN_208842	ILMN_208842	DPM1	NM_010072.3	NM_010072.3		13480	114688043	NM_010072.3	Dpm1	NP_034202.1	ILMN_2590054	004490072	S	2103	GAGCATGAAAGCCTTGCCATGTAGTCACATAGCTGGGCCCACAGTGCATA	2	-	168034688-168034737	2qH3	Mus musculus dolichol-phosphate (beta-D) mannosyltransferase 1 (Dpm1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; A protein complex that possesses dolichyl-phosphate beta-D-mannosyltransferase activity; contains a catalytic subunit, a regulatory subunit, and a third subunit that stabilizes the complex. In human and several other metazoa, the subunits are named DPM1, DPM2 and DPM3, respectively [goid 33185] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISO]; The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units [goid 19348] [evidence ISO]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISO]; The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units [goid 19348] [evidence ISO]; The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units [goid 19348] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [evidence ISO]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [evidence IMP]	AI118379; AI194292	AI118379; AI194292
Mus musculus	RefSeq	ILMN_208842	ILMN_208842	DPM1	NM_010072.3	NM_010072.3		13480	114688043	NM_010072.3	Dpm1	NP_034202.1	ILMN_2660306	006760475	S	924	AATGTGGATCTTTTTCTCTGGAGAAGCTCCATTTTATATTTCAAATTAAA	2	-	168035867-168035916	2qH3	Mus musculus dolichol-phosphate (beta-D) mannosyltransferase 1 (Dpm1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; A protein complex that possesses dolichyl-phosphate beta-D-mannosyltransferase activity; contains a catalytic subunit, a regulatory subunit, and a third subunit that stabilizes the complex. In human and several other metazoa, the subunits are named DPM1, DPM2 and DPM3, respectively [goid 33185] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISO]; The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units [goid 19348] [evidence ISO]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISO]; The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units [goid 19348] [evidence ISO]; The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units [goid 19348] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [evidence ISO]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [evidence IMP]	AI118379; AI194292	AI118379; AI194292
Mus musculus	RefSeq	ILMN_220718	ILMN_220718	ELP3	NM_028811.1	NM_028811.1		74195	33469022	NM_028811.1	Elp3	NP_083087.1	ILMN_2820297	000020301	S	2517	AGGTAGGAGTTAGGCTAGTGTGTGGAAGGAGGCCTGTCTGACCTGCATGG	14	-	64484721-64484770	14qD1	Mus musculus elongation protein 3 homolog (S. cerevisiae) (Elp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]	2610507P14Rik	2610507P14Rik
Mus musculus	RefSeq	ILMN_223754	ILMN_223754	EFCAB7	NM_145549.1	NM_145549.1		230500	21704081	NM_145549.1	Efcab7	NP_663524.1	ILMN_2768638	007610504	S	1985	TCGACTATTTTATTTATTAACTACATACTTTTCCATGTAACTGGTGTACT				4qC6	Mus musculus EF-hand calcium binding domain 7 (Efcab7), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC28352; mKIAA1799; MGC118010	MGC28352; mKIAA1799; MGC118010
Mus musculus	RefSeq	ILMN_215990	ILMN_215990	HAPLN2	NM_022031.1	NM_022031.1		73940	15042970	NM_022031.1	Hapln2	NP_071314.1	ILMN_2666080	005090470	S	1464	GGCCATCTACACGGGAGAATACAGGCTGCCCTTTATGTCTAACCAGTCAC	3	-	87826142-87826191	3qF1	Mus musculus hyaluronan and proteoglycan link protein 2 (Hapln2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930401E20Rik; Bral1	4930401E20Rik; Bral1
Mus musculus	RefSeq	ILMN_217595	ILMN_217595	IRAK2	NM_172161.2	NM_172161.2		108960	31543002	NM_172161.2	Irak2	NP_751893.2	ILMN_2937735	000020110	S	2489	CCGGTATTTAGGAACTGCCTGCTTTTCACCTTCGACCTCCCATTGTGCCC	6	+	113660132-113660181	6qE3	Mus musculus interleukin-1 receptor-associated kinase 2 (Irak2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISO]	MGC102586; IRAK-2; AI649099; 6330415L08Rik	MGC102586; IRAK-2; AI649099; 6330415L08Rik
Mus musculus	RefSeq	ILMN_217595	ILMN_217595	IRAK2	NM_172161.2	NM_172161.2		108960	31543002	NM_172161.2	Irak2	NP_751893.2	ILMN_2937738	004210632	S	2707	CAGAGCTGCTCTATTCAGCTCTTGGGAGGATGGGTGCAGCGGCTGCAGAA	6	+	113660350-113660399	6qE3	Mus musculus interleukin-1 receptor-associated kinase 2 (Irak2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISO]	MGC102586; IRAK-2; AI649099; 6330415L08Rik	MGC102586; IRAK-2; AI649099; 6330415L08Rik
Mus musculus	RefSeq	ILMN_214158	ILMN_214158	GLULD1	NM_153601.1	NM_153601.1		266744	23956409	NM_153601.1	Gluld1	NP_705829.1	ILMN_2644906	004920563	S	1708	GGATGGGACTCTGCCCTGTAGAGATATGATGAGTAGCTAGTTTATCAGAA	1	+	31261375-31261375:31261376-31261424	1qB	Mus musculus glutamate-ammonia ligase (glutamine synthetase) domain containing 1 (Gluld1), mRNA.				Lgs	Lgs
Mus musculus	RefSeq	ILMN_211471	ILMN_211471	DBP	NM_016974.1	NM_016974.1		13170	8393239	NM_016974.1	Dbp	NP_058670.1	ILMN_2616226	003180750	S	1443	CCAGTGGTCTGGCCAGCTAGGTGCCCGAAGAACGTCATGATGCAGACAAA	7	+	52965323-52965372	7qB4	Mus musculus D site albumin promoter binding protein (Dbp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191889	ILMN_191889	8030474H12RIK	scl35347.1.1_116						8030474H12Rik		ILMN_1235856	004570711	S	1	CTTTGGCATACTGGGCGTTTAGTTGTAATAGGGTCCTGGTGTTAGAGTGT										
Mus musculus	MEEBO	ILMN_213947	ILMN_213947	5330438I03RIK	scl0381325.1_34	NM_199365.1			40786433	NM_199365.1	5330438I03Rik		ILMN_2642624	006590066	S	2490	TTGCAGGTGTTTGTGGTTGTGAGTGGCTAGGCCAGACGTTTGGAAGGTGG										
Mus musculus	MEEBO	ILMN_209966	ILMN_209966	PPP1R12A	scl0003827.1_21	XM_137239.3			38090709	XM_137239.3	Ppp1r12a		ILMN_2671438	006130040	S	6047	GCTGAGTTGCGCTTTTAACTTCTCATGTGGGCCTTTGGGCAGGAACCTGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence ISO]		
Mus musculus	RefSeq	ILMN_219670	ILMN_219670	BAG1	NM_009736.1	NM_009736.1		12017	6753159	NM_009736.1	Bag1	NP_033866.3	ILMN_2712018	005090731	S	1196	GGGCAACTAGCCAAATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAATG	4	-	40883477-40883526	4qA5	Mus musculus Bcl2-associated athanogene 1 (Bag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rap46	Rap46
Mus musculus	RefSeq	ILMN_217158	ILMN_217158	COL11A2	NM_009926.1	NM_009926.1		12815	6753481	NM_009926.1	Col11a2	NP_034056.1	ILMN_2865074	000990220	S	5555	AAAAATCCCAGCAGATATTGGGGGCAGGTGCTGCAAGGGTGGGCGGGCAG	17	+	34195049-34195098	17qB1	Mus musculus collagen, type XI, alpha 2 (Col11a2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISO]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; A homeostatic process involved in the maintenance of an internal equilibrium within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function [goid 1894] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IC ]		
Mus musculus	RefSeq	ILMN_219564	ILMN_219564	OLFR1368	NM_146534.1	NM_146534.1		258527	33238951	NM_146534.1	Olfr1368	NP_666745.1	ILMN_2710507	004260484	S	643	CTCATCTCCTATGCAGTTATCACTCAAGCTGTGATGAAGATCAAGTCAGC	13	-	21234232-21234281	13qA3.1	Mus musculus olfactory receptor 1368 (Olfr1368), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-15	MOR256-15
Mus musculus	RefSeq	ILMN_196906	ILMN_196906	LOC227109	XM_129858.2	XM_129858.2			38049500	XM_129858.2	LOC227109		ILMN_1225815	005550672	S	3458	GCTGGCCTTGACCTCAGGCCTACCTCTGCCTTCCAAGTGCCAGGATTAAA										
Mus musculus	RefSeq	ILMN_190856	ILMN_230394	TM7SF4	NM_029422.3	NM_029422.3		75766	146141176	NM_029422.3	Tm7sf4	NP_083698.1	ILMN_1231166	003130743	S	1603	ATGCCAAATAGCCCCTAGGTAAATAGTTTCAGAGTCTGTCTTCCAAACAA				15qB3.1	Mus musculus transmembrane 7 superfamily member 4 (Tm7sf4), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IMP]		FIND; DCSTAMP; 4833414I07Rik; DC-STAMP	FIND; DCSTAMP; 4833414I07Rik; DC-STAMP
Mus musculus	RefSeq	ILMN_255042	ILMN_255042	HNRNPH3	NM_001079824.1	NM_001079824.1		432467	119637822	NM_001079824.1	Hnrnph3	NP_001073293.1	ILMN_2958912	000830673	S	2	GGAGACGGTTGAGGGGAGCGAGGGAGCCGAACCGTTGTGGCGAGCGCTCA	10	-	62486546-62486595	10qB4	Mus musculus heterogeneous nuclear ribonucleoprotein H3 (Hnrnph3), mRNA.				AI666703; AA693301	AI666703; AA693301
Mus musculus	Riken	ILMN_205755	ILMN_205755	SPN	ri|A630014B01|PX00144A16|AK041480|2164					AK041480	Spn		ILMN_2574982	000060450	S	1847	AAACCATGAGCCAGCCCTGGTAACACAAGCCTGTTGCTCCTGGAACTTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan [goid 1562] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence ISO]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism [goid 50688] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IMP]; Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response [goid 1808] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell activation [goid 50868] [evidence IMP]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any part of a bacterial cell [goid 8367] [evidence ISO]; Interacting selectively with any part of a bacterial cell [goid 8367] [evidence IMP]		
Mus musculus	RefSeq	ILMN_207479	ILMN_207479	3321402G02RIK	XM_140915.1	XM_140915.1			20827667	XM_140915.1	3321402G02Rik		ILMN_1260595	006960072	I	1281	GTTAGTTCCTGGTTTTCTTATTCTCCAGTTCCACGTGCAGGGGCCACACA										
Mus musculus	Riken	ILMN_204109	ILMN_204109	A730096C04RIK	ri|A730096C04|PX00153F17|AK043445|1832					AK043445	A730096C04Rik		ILMN_2562439	003850066	S	1534	ACCCACGTCCCCACCTTCACTGATGGTCAGCAAATTGCTGTGATCGCCAA										
Mus musculus	RefSeq	ILMN_210096	ILMN_210096	KERA	NM_008438.1	NM_008438.1		16545	6680553	NM_008438.1	Kera	NP_032464.1	ILMN_2602169	004570564	S	1746	TCAGGTCCCTTGGAGCGAAACAATAAAGCAGTAAAAGGTGGTGGTTCACT	10	+	97043172-97043221	10qC3	Mus musculus keratocan (Kera), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLRR2B; CNA2	SLRR2B; CNA2
Mus musculus	Riken	ILMN_207082	ILMN_207082	PLAA	ri|C130058H18|PX00666B07|AK081641|1518					AK081641	Plaa		ILMN_1250847	002450332	S	1014	CCGTGTCTAGGTGGTTGGTAGGTACTTAAGTATTGGAGGGTTGCTTGCAC							The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of the enzyme phospholipase A2 [goid 16005] [evidence IDA]		
Mus musculus	Riken	ILMN_203205	ILMN_203205	B230210A04RIK	ri|B230210A04|PX00069D06|AK045553|2063					AK045553	B230210A04Rik		ILMN_1238426	000150689	S	1802	GTATGCACACCAGAAGGGCAGTGAAAGGCAGCTACGTCCCAGAACCCTCT										
Mus musculus	RefSeq	ILMN_228600	ILMN_228600	PWWP2B	NM_001033206.2	NM_001033206.2		101631	118131138	NM_001033206.2	Pwwp2b	NP_001028378.1	ILMN_2833781	003400168	S	1911	TCCTGTGCCTGGCCTCCGTTATTCAGCACGAGCTGCCCTATAGGCTTTGA	7	+	146452728-146452777	7qF4	Mus musculus PWWP domain containing 2B (Pwwp2b), transcript variant 2, mRNA.				D7Ertd517e; D930023J19Rik; AI594893	D7Ertd517e; D930023J19Rik; AI594893
Mus musculus	MEEBO	ILMN_192234	ILMN_192234	9626100_15	9626100_15						9626100_15		ILMN_1221149	000870593	S	14	ACCAATCAGTTCGCTTCTCGCTTCTGTTCGCGCGCTTCCGCTCTCCGAGC										
Mus musculus	RefSeq	ILMN_200884	ILMN_200884	LOC381889	XM_358671.1	XM_358671.1			38086820	XM_358671.1	LOC381889		ILMN_2540344	004850195	S	142	CGAGCTGCGGCACCAGGTCATGATCAACCAGTTCGTGCTGGCCGCGGGCT										
Mus musculus	MEEBO	ILMN_219399	ILMN_219399	FBXW11	scl41711.15_185	NM_134015.1			23956269	NM_134015.1	Fbxw11		ILMN_2708319	004180367	S	3772	AGCTATTGAAACTGTTAAATTGTACAGATATTATCATGACGGCTTTGTAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_198705	ILMN_248969	A630018P17RIK	NM_001007577.2	NM_001007577.2		245695	145699115	NM_001007577.2	A630018P17Rik	NP_001007578.2	ILMN_1255742	003780465	S	1263	GTCTTGGACATGGCAAGCCAGGAACTCAAGCAACTGAGAGCTTCCTACAC				XqF5	Mus musculus RIKEN cDNA A630018P17 gene (A630018P17Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC93029; RP23-408K4.6; Gm390	MGC93029; RP23-408K4.6; Gm390
Mus musculus	RefSeq	ILMN_209542	ILMN_209542	1700016D06RIK	NM_024271.1	NM_024271.1		76413	21313197	NM_024271.1	1700016D06Rik	NP_077233.1	ILMN_2939583	007100441	S	992	GACATTTTCTCAATTAGTGATCACAGGTGGGAGGGCCCATTGTGGATGGG	8	-	11655145-11655194	8qA1.1	Mus musculus RIKEN cDNA 1700016D06 gene (1700016D06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209542	ILMN_209542	1700016D06RIK	NM_024271.1	NM_024271.1		76413	21313197	NM_024271.1	1700016D06Rik	NP_077233.1	ILMN_2939579	001990167	S	617	GCACATGGGGACAGAAGAGAGTGGAAGGAGCCATCGACCTGTGTGAACTG	8	-	11655520-11655569	8qA1.1	Mus musculus RIKEN cDNA 1700016D06 gene (1700016D06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_256037	ILMN_256037	INTS5	NM_176843.2	NM_176843.2		109077	31341150	NM_176843.2	Ints5	NP_789813.1	ILMN_2952587	003930039	S	2876	GTGCGTCTGTTGCTGCTTAGTGTCTGGGGTTTTCTTCGGGAGCATGGGCC	19	+	8971980-8972029	19qA	Mus musculus integrator complex subunit 5 (Ints5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			1110055N21Rik; mKIAA1698	1110055N21Rik; mKIAA1698
Mus musculus	RefSeq	ILMN_250290	ILMN_250290	MMP27	NM_001030289.1	NM_001030289.1		234911	71892409	NM_001030289.1	Mmp27	NP_001025460.1	ILMN_2982829	000580204	S	930	GCCAAGTGGAAATTCTGAACCCCACGCCTGTGACCCCACCTTGACTTTTG	9	+	7577660-7577709	9qA1	Mus musculus matrix metallopeptidase 27 (Mmp27), mRNA.				Gm180	Gm180
Mus musculus	MEEBO	ILMN_213248	ILMN_213248	1700008J08RIK	scl41871.7.1_160	XM_125967.3			38091290	XM_125967.3	1700008J08Rik		ILMN_2635159	003140554	S	2522	GGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAA										
Mus musculus	RefSeq	ILMN_209093	ILMN_242203	IFITM7	NM_028968.1	NM_028968.1		74482	21539642	NM_028968.1	Ifitm7	NP_083244.1	ILMN_1228924	001260674	S	1335	GCCGGACAGACACTATGGAAGAGTGCTTTCAGTATTTTACAATGAAAAGA	16	-	13983330-13983379	16qA1	Mus musculus interferon induced transmembrane protein 7 (Ifitm7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			Mil4; 4933438K12Rik	Mil4; 4933438K12Rik
Mus musculus	RefSeq	ILMN_223620	ILMN_223620	ADFP	NM_007408.3	NM_007408.3		11520	116235488	NM_007408.3	Adfp	NP_031434.3	ILMN_1222246	005670164	S	950	AGAAAATTCAGGGTGCTCAGGATAAGCTCTATGTCTCGTGGGTGGAGTGG	4	-	86304532-86304581	4qC4	Mus musculus adipose differentiation related protein (Adfp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IDA]	The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IDA]; The directed movement of long-chain fatty acids into, out of, within or between cells. A long-chain fatty acid is an aliphatic compound with a terminal carboxyl group and with a chain length greater than C12 [goid 15909] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Adrp; ADPH; AA407157	Adrp; ADPH; AA407157
Mus musculus	RefSeq	ILMN_208897	ILMN_208897	CD274	NM_021893.2	NM_021893.2		60533	45433566	NM_021893.2	Cd274	NP_068693.1	ILMN_1226800	003870561	S	3362	CCCCCGGTGGAACCCCCTCTGTTACCTGTTCACACAAGCTTATTGATGAG	19	+	29462325-29462374	19qC1	Mus musculus CD274 antigen (Cd274), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pdcd1lg1; Pdcd1l1; B7-H1; PD-L1	Pdcd1lg1; Pdcd1l1; B7-H1; PD-L1
Mus musculus	RefSeq	ILMN_200636	ILMN_224779	LOC546908	XM_886491.1	XM_886491.1		546908	83029279	XM_886491.1	LOC546908	XP_891584.1	ILMN_1247388	005130091	S	190	TTGCCGAAACAGCGAGAACTTCAATATGCAGAGGGCAAGAAGAGAGGGGC	6	-	81841292-81841341		PREDICTED: Mus musculus similar to mortality factor 4 like 1 isoform b (LOC546908), mRNA.					
Mus musculus	MEEBO	ILMN_219499	ILMN_219499	1700010L04RIK	scl069333.6_159	XM_355963.1			38087705	XM_355963.1	1700010L04Rik		ILMN_2709629	000240600	S	807	GACTGTCAAGTGAGGACTCTAGATATCCCAAGTCTGGCCTCCTACGTGGT										
Mus musculus	RefSeq	ILMN_187925	ILMN_224625	CCND2	NM_009829.3	NM_009829.3		12444	80751174	NM_009829.3	Ccnd2	NP_033959.1	ILMN_2700166	001580088	S	1812	GGACACAGGTGAACGGCTCCTAAGTCTCATGTTTGGTGAATTTGGGCTTC	6	-	127079636-127079685	6qF3	Mus musculus cyclin D2 (Ccnd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI256817; 2600016F06Rik; C86853; BF642806; Vin-1; Vin1	AI256817; 2600016F06Rik; C86853; BF642806; Vin-1; Vin1
Mus musculus	RefSeq	ILMN_188303	ILMN_250529	SCN2B	NM_001014761.2	NM_001014761.2		72821	130504904	NM_001014761.2	Scn2b	NP_001014761.1	ILMN_2451529	007000372	S	4369	TAGGGGAGAACCCAGCTGCATACATAGCAAGTGCTTATGCAGGTCTAGGT	9	+	44937960-44938009	9qA5.2	Mus musculus sodium channel, voltage-gated, type II, beta (Scn2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence ISO]	Gm183; MGC116602; AI840361; 2810451E09Rik	Gm183; MGC116602; AI840361; 2810451E09Rik
Mus musculus	RefSeq	ILMN_198927	ILMN_250529	SCN2B	NM_001014761.2	NM_001014761.2		72821	130504904	NM_001014761.2	Scn2b	NP_001014761.1	ILMN_1244207	003360170	S	1158	AAACTGTGGGAGTAGCAGTGTGTGTGGTGGCGGGGTTCTGTGCTGACCAG	9	+	44934749-44934798	9qA5.2	Mus musculus sodium channel, voltage-gated, type II, beta (Scn2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence ISO]	Gm183; MGC116602; AI840361; 2810451E09Rik	Gm183; MGC116602; AI840361; 2810451E09Rik
Mus musculus	MEEBO	ILMN_192091	ILMN_192091	4930458D05RIK	scl26318.3.1_12						4930458D05Rik		ILMN_1217647	002360296	S	1	GGTCTGCACACTGGCCGCAAGTTCAAGAATCCAGTGAAGGATCATGACTG										
Mus musculus	RefSeq	ILMN_215308	ILMN_215308	CASP14	NM_009809.4	NM_009809.4		12365	145966763	NM_009809.4	Casp14	NP_033939.1	ILMN_1241322	007210438	S	2169	CCACTCCTAATATTCTTTTTTGCTTGTGCGGCTGCCTCTTGCACAATGAA				10qC1	Mus musculus caspase 14 (Casp14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]	mini-ICE; MICE; MGC123949; MGC123948	mini-ICE; MICE; MGC123949; MGC123948
Mus musculus	RefSeq	ILMN_198466	ILMN_198466	LOC213440	XM_145046.2	XM_145046.2			38085322	XM_145046.2	LOC213440		ILMN_2531794	000450221	S	73	TTTTTTGTGCAAACCTGTTGGGAGGAGCACAAGAAGAAGCACCCAGATGC										
Mus musculus	Riken	ILMN_206286	ILMN_206286	SRB1	ri|B430201O11|PX00071K22|AK080894|2453					AK080894	Srb1		ILMN_1218449	000010576	S	2116	GAAGGTAGAGGTGGGGGGTCAGGGCTGGGCTGGTTAGAGAAGCAAAGGAA										
Mus musculus	RefSeq	ILMN_233470	ILMN_233470	SSXB2	NM_001001450.1	NM_001001450.1		387132	51371942	NM_001001450.1	Ssxb2	NP_001001450.1	ILMN_3093375	000240471	A	561	CCGGTTTTCATGCGTGGTAAGGAGCAGGACAAGCAATCCCTGGTTGAAGG	X	-	7615102-7615151	XqA1.1	Mus musculus synovial sarcoma, X member B, breakpoint 2 (Ssxb2), mRNA.					
Mus musculus	RefSeq	ILMN_233470	ILMN_233470	SSXB2	NM_001001450.1	NM_001001450.1		387132	51371942	NM_001001450.1	Ssxb2	NP_001001450.1	ILMN_3021016	005700743	I	125	CTCAGCATCGCCATATAGCCATTTCCTAGGTCCCTGGAAACCATCAGTTG	X	-	7617940-7617989	XqA1.1	Mus musculus synovial sarcoma, X member B, breakpoint 2 (Ssxb2), mRNA.					
Mus musculus	RefSeq	ILMN_208941	ILMN_208941	RASGRP1	NM_011246.2	NM_011246.2		19419	40254575	NM_011246.2	Rasgrp1	NP_035376.1	ILMN_1214318	007510358	S	3118	GGCACATCAGCACATCTACCTAGAAGTGAACTCCTAGCGATGTAGCCTGG	2	-	117107666-117107715	2qE5	Mus musculus RAS guanyl releasing protein 1 (Rasgrp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rasgrp	Rasgrp
Mus musculus	RefSeq	ILMN_208941	ILMN_208941	RASGRP1	NM_011246.2	NM_011246.2		19419	40254575	NM_011246.2	Rasgrp1	NP_035376.1	ILMN_1246609	005860296	S	4916	GTCTGTGAACAGCAATGTCTCTGCTCTTCTTCTCTGTGGAGTGACTCACC	2	-	117105868-117105917	2qE5	Mus musculus RAS guanyl releasing protein 1 (Rasgrp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rasgrp	Rasgrp
Mus musculus	RefSeq	ILMN_208941	ILMN_208941	RASGRP1	NM_011246.2	NM_011246.2		19419	40254575	NM_011246.2	Rasgrp1	NP_035376.1	ILMN_1246905	002680484	S	2541	CGGTGATAGTGCTTAATCCAGAATTTCAAGGACCAGAATCTGCAGGAGGG	2	-	117108243-117108277:117108278-117108292	2qE5	Mus musculus RAS guanyl releasing protein 1 (Rasgrp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rasgrp	Rasgrp
Mus musculus	RefSeq	ILMN_211412	ILMN_211412	TTC33	NM_026213.3	NM_026213.3		67515	118129830	NM_026213.3	Ttc33	NP_080489.1	ILMN_1232922	007380280	S	455	GGGATGAAGCACTACAGCTAACCCCAGGTGATGCCACCCTTTATGAGATG	15	+	5158392-5158441	15qA1	Mus musculus tetratricopeptide repeat domain 33 (Ttc33), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Osrf; AI507072; 2410099M07Rik; 2900001O04Rik; AW538342	Osrf; AI507072; 2410099M07Rik; 2900001O04Rik; AW538342
Mus musculus	RefSeq	ILMN_211412	ILMN_211412	TTC33	NM_026213.3	NM_026213.3		67515	118129830	NM_026213.3	Ttc33	NP_080489.1	ILMN_2615628	002320086	S	1693	CTGGATACTGGTGTGTCAGAGATGGATTCATTTTACTGTCAAGATTGAGT	15	+	5168197-5168246	15qA1	Mus musculus tetratricopeptide repeat domain 33 (Ttc33), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Osrf; AI507072; 2410099M07Rik; 2900001O04Rik; AW538342	Osrf; AI507072; 2410099M07Rik; 2900001O04Rik; AW538342
Mus musculus	RefSeq	ILMN_211412	ILMN_211412	TTC33	NM_026213.3	NM_026213.3		67515	118129830	NM_026213.3	Ttc33	NP_080489.1	ILMN_2713039	003420475	S	571	AAGCGTAACCCACACTCGTGGGAGGCGTGGCAAACTTTAGGTCGAGCTCA	15	+	5162056-5162105	15qA1	Mus musculus tetratricopeptide repeat domain 33 (Ttc33), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Osrf; AI507072; 2410099M07Rik; 2900001O04Rik; AW538342	Osrf; AI507072; 2410099M07Rik; 2900001O04Rik; AW538342
Mus musculus	RefSeq	ILMN_219025	ILMN_219025	TAT	NM_146214.2	NM_146214.2		234724	118130213	NM_146214.2	Tat	NP_666326.1	ILMN_1260050	000870711	S	1929	GTCGAAGACTTGTAAATTTGGTTAACTGTATTCTAAGTGCATTGGGAAAC	8	+	112523277-112523326	8qD3	Mus musculus tyrosine aminotransferase (Tat), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6572] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9074] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids, as carried out by individual cells [goid 6519] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate [goid 4838] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]	MGC37819; MGC37790; MGC37772; MGC37842; MGC37789; MGC37828	MGC37819; MGC37790; MGC37772; MGC37842; MGC37789; MGC37828
Mus musculus	RefSeq	ILMN_216143	ILMN_216143	ATG4A	NM_174875.3	NM_174875.3		666468	74136554	NM_174875.3	Atg4a	NP_777364.3	ILMN_2667788	007330142	S	1005	CTGCAAAGAAGAGAAAGACTTTGATAATTGGTGTAGCCTTGTTCAGAAGG				XqF1	Mus musculus autophagy-related 4A (yeast) (Atg4a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence ISO]	AI627006; Atg4al; Apg4a; AV169859; Autl2; MGC107179	AI627006; Atg4al; Apg4a; AV169859; Autl2; MGC107179
Mus musculus	RefSeq	ILMN_210872	ILMN_210872	MRPL10	NM_026154.1	NM_026154.1		107732	13385657	NM_026154.1	Mrpl10	NP_080430.1	ILMN_2822622	004210047	S	1241	GCCAGCTCCTTTAGTCCTCACCATTCAGGAAACAGCAGAGAAGCCTGAGT	11	+	96910086-96910135	11qD	Mus musculus mitochondrial ribosomal protein L10 (Mrpl10), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISS]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence ISS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	MGC28763; 0610040E02Rik; Rpml8; C78440; MRP-L8	MGC28763; 0610040E02Rik; Rpml8; C78440; MRP-L8
Mus musculus	RefSeq	ILMN_210872	ILMN_210872	MRPL10	NM_026154.1	NM_026154.1		107732	13385657	NM_026154.1	Mrpl10	NP_080430.1	ILMN_2822621	002470743	S	1336	AAAGTAGAACACGAGTGGGTCCTGGTGGGCTGACGTTGGCGTTCCACCCT	11	+	96910181-96910230	11qD	Mus musculus mitochondrial ribosomal protein L10 (Mrpl10), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISS]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence ISS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	MGC28763; 0610040E02Rik; Rpml8; C78440; MRP-L8	MGC28763; 0610040E02Rik; Rpml8; C78440; MRP-L8
Mus musculus	RefSeq	ILMN_222176	ILMN_222176	GALR3	NM_015738.1	NM_015738.1		14429	7657113	NM_015738.1	Galr3	NP_056553.1	ILMN_2887408	004480161	S	296	ATCTGCTCATCTACCTCACCATGTATGCCAGCAGCTTCACCCTGGCGGCC	15	+	78872657-78872706	15qE1	Mus musculus galanin receptor 3 (Galr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with galanin to initiate a change in cell activity [goid 4966] [evidence ISO]	Galnr3	Galnr3
Mus musculus	RefSeq	ILMN_194834	ILMN_242491	LOC633595	XM_908031.2	XM_908031.2		633595	94410003	XM_908031.2	LOC633595	XP_913124.2	ILMN_2510059	006980066	S	251	CTGAGTGGTTGGCTTTGATTAGAAACAAAGCTAATGGCTATACAACAGAG					PREDICTED: Mus musculus similar to Ig heavy chain V region MOPC 47A (LOC633595), mRNA.					
Mus musculus	RefSeq	ILMN_202701	ILMN_260860	8430431K14RIK	NR_002849.1	NR_002849.1		78103	84872139	NR_002849.1	8430431K14Rik		ILMN_1220378	006520736	S	1965	CAAGCAGGAGGTTTAGGCAGGAACCCAGAGGCAGAAATGGAAAGAGGCGC	19	-	31288872-31288921	19qC1	Mus musculus RIKEN cDNA 8430431K14 gene (8430431K14Rik), non-coding RNA.					
Mus musculus	MEEBO	ILMN_194594	ILMN_194594	MTDNA_ND5	mtDNA_ND5						mtDNA_ND5		ILMN_2507810	003120520	S	20	CGAAAATGACCCAGACCTCATAAACCCAATCAAACGCCTAGCATTCGGAA										
Mus musculus	RefSeq	ILMN_200399	ILMN_200399	LOC384245	XM_357520.1	XM_357520.1			38081606	XM_357520.1	LOC384245		ILMN_1233052	001660411	S	486	TGGGCGGTTCCTCAGCCACACGGCTTTTGAACAAGGTGATCTCATCCAGG										
Mus musculus	RefSeq	ILMN_211304	ILMN_211304	OLFR639	NM_147084.1	NM_147084.1		259088	22128798	NM_147084.1	Olfr639	NP_667295.1	ILMN_2940110	001580521	S	661	GGGCTCATTCTTTACACAGTGATGGGTATTGCTTCTGGTGAGGGTCGGAA	7	-	111160504-111160553	7qE3	Mus musculus olfactory receptor 639 (Olfr639), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR12-1	MOR12-1
Mus musculus	RefSeq	ILMN_211304	ILMN_211304	OLFR639	NM_147084.1	NM_147084.1		259088	22128798	NM_147084.1	Olfr639	NP_667295.1	ILMN_1218318	000020286	S	157	CAAGAGTCAGCTCTCCATGAGCCAATGTACCTGTTCCTCTCCATGCTGGC	7	-	111161008-111161057	7qE3	Mus musculus olfactory receptor 639 (Olfr639), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR12-1	MOR12-1
Mus musculus	MEEBO	ILMN_219393	ILMN_219393	4930532L20RIK	scl30346.6.1_142	XM_133002.3			38083694	XM_133002.3	4930532L20Rik		ILMN_2708234	001300632	S	1133	CTTCATTAACATTTTCTGACAACTTATGTACTAAAAATTAAAAATTCTAT										
Mus musculus	RefSeq	ILMN_199086	ILMN_315529	LOC213332	XR_032385.1	XR_032385.1		213332	149260696	XR_032385.1	LOC213332		ILMN_1233159	002030468	S	1680	GCTACACGACTGTGAGGAAGAGAATGAGGAGGACGATGCAGAGAAGTGGA	10	-	39611697-39611746	10qB1	PREDICTED: Mus musculus similar to Na+ dependent glucose transporter 1 (LOC213332), misc RNA.					
Mus musculus	RefSeq	ILMN_213048	ILMN_213048	EIF3G	NM_016876.3	NM_016876.3		53356	118131193	NM_016876.3	Eif3g	NP_058572.2	ILMN_2737193	004220433	S	864	CAAGGGTTTTGCTTTTATCAGCTTTCACCGCCGGGAGGATGCTGCACGTG	9	-	20699137-20699183:20699277-20699279	9qA3	Mus musculus eukaryotic translation initiation factor 3, subunit G (Eif3g), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	p44; TU-189B2; 44kDa; D0Jmb4; eIF3-p44	p44; TU-189B2; 44kDa; D0Jmb4; eIF3-p44
Mus musculus	RefSeq	ILMN_213614	ILMN_245794	COG7	NM_001033318.3	NM_001033318.3		233824	141802214	NM_001033318.3	Cog7	NP_001028490.2	ILMN_2638977	001440544	S	2161	ATTGCCAGAGCCACTATGCAGACCTACTGTGACGTGATCCTCCAGATCCC	7	-	129068981-129069030	7qF2	Mus musculus component of oligomeric golgi complex 7 (Cog7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5630400E24Rik; Gm167	5630400E24Rik; Gm167
Mus musculus	RefSeq	ILMN_209348	ILMN_209348	SEPHS2	NM_009266.3	NM_009266.3		20768	142976633	NM_009266.3	Sephs2	NP_033292.2	ILMN_1217590	001770707	S	1471	CCAACGCAGCCTCTGAGCCTAGTTCTTGAAATGGAATAGCGGTTGTTGGG	7	-	134416053-134416074:134416075-134416102	7qF3	Mus musculus selenophosphate synthetase 2 (Sephs2), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + selenide + H2O = AMP + selenophosphate + phosphate [goid 4756] [evidence IEA]	Ysg3; Sps2	Ysg3; Sps2
Mus musculus	RefSeq	ILMN_223688	ILMN_223688	MAP3K8	NM_007746.2	NM_007746.2		26410	118131172	NM_007746.2	Map3k8	NP_031772.1	ILMN_1245924	002970598	S	1918	CTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGTTGGTCGACTCTAG	18	-	4331864-4331913	18qA1	Mus musculus mitogen-activated protein kinase kinase kinase 8 (Map3k8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]	Cot; Tpl2; Cot/Tpl2; Est; Estf; c-COT; Tpl-2	Cot; Tpl2; Cot/Tpl2; Est; Estf; c-COT; Tpl-2
Mus musculus	MEEBO	ILMN_188583	ILMN_188583	NALP10	scl30839.3_120				31342117	NM_175532	Nalp10		ILMN_1255593	004060156	S	2150	GACCAGGAGTCTTAGCATGTGCAATGAAAGATTCACTGAAAGAACCAGCC										
Mus musculus	MEEBO	ILMN_216145	ILMN_216145	PRKCQ	scl0003216.1_934	NM_008859.1			6679352	NM_008859.1	Prkcq		ILMN_2667829	001580170	S	2987	CCTCTGTTCTCAGTTGATCTCTCTGTCAGCGTAGGTAGGCACTCATTACC						An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196762	ILMN_196762	IFNA9	NM_010507.1	NM_010507.1		15972	6754297	NM_010507.1	Ifna9	NP_034637.1	ILMN_2750971	003390010	S	383	GGATGAAGGAACTGCCCCTGACCCAGGAAGACTCCCAGCTGGCTATGAAG	4	-	88237857-88237906	4qC4	Mus musculus interferon alpha 9 (Ifna9), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	Ifa9	Ifa9
Mus musculus	RefSeq	ILMN_196762	ILMN_196762	IFNA9	NM_010507.1	NM_010507.1		15972	6754297	NM_010507.1	Ifna9	NP_034637.1	ILMN_1237080	003360288	S	370	ATGCAGCTGGTCGGGATGAAGGAACTGCCCCTGACCCAGGAAGACTCCCA	4	-	88237870-88237919	4qC4	Mus musculus interferon alpha 9 (Ifna9), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	Ifa9	Ifa9
Mus musculus	RefSeq	ILMN_219012	ILMN_219012	RPGR	NM_011285.1	NM_011285.1		19893	6755347	NM_011285.1	Rpgr	NP_035415.1	ILMN_2820877	006220170	S	2282	GGTCACCGAGCACATTTGTTCTTCATACTTGAAAAATGGTGTGACTTCTG	X	-	9773210-9773259	XqA1.1	Mus musculus retinitis pigmentosa GTPase regulator (Rpgr), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rp3h	Rp3h
Mus musculus	RefSeq	ILMN_219012	ILMN_219012	RPGR	NM_011285.1	NM_011285.1		19893	6755347	NM_011285.1	Rpgr	NP_035415.1	ILMN_2703093	000650646	S	1851	GAAGGCTCAGAAACTATTGATATTACTGATGAGAAGCTAGATGAAGTCCT	X	-	9778422-9778471	XqA1.1	Mus musculus retinitis pigmentosa GTPase regulator (Rpgr), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rp3h	Rp3h
Mus musculus	RefSeq	ILMN_210617	ILMN_317388	LOC100048362	XM_001480089.1	XM_001480089.1		100048362	149255750	XM_001480089.1	LOC100048362	XP_001480139.1	ILMN_2607434	001440707	S	2968	CTTGGACACTACTTCAAGGAGACTTCAAGGCAATAATAAAACATCAGCAT					PREDICTED: Mus musculus similar to mKIAA1238 protein (LOC100048362), mRNA.					
Mus musculus	RefSeq	ILMN_185568	ILMN_185568	UBE4B	NM_022022.1	NM_022022.1		63958	11968157	NM_022022.1	Ube4b	NP_071305.1	ILMN_2935999	004150138	S	5395	GCGCACGCGAGCAGAAGCCCTCTCTGTATTACCGCTCCCTACGCAACATA	4	-	148172397-148172446	4qE2	Mus musculus ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) (Ube4b), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence NAS]; The process by which a ubiquitin moiety, or multiple moieties, are covalently attached to the target protein, thereby initiating the degradation of that protein [goid 42787] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence TAS]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with any enzyme [goid 19899] [evidence IPI]; Interacting selectively with an unfolded protein [goid 51082] [evidence NAS]; Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [evidence IDA]	UFD2; 4930551I19Rik; AU014668; 4933406G05Rik; mKIAA0684; D4Bwg0973e; Ufd2p; UFD2a	UFD2; 4930551I19Rik; AU014668; 4933406G05Rik; mKIAA0684; D4Bwg0973e; Ufd2p; UFD2a
Mus musculus	RefSeq	ILMN_249536	ILMN_249536	WIPI2	NM_178398.2	NM_178398.2		74781	31341584	NM_178398.2	Wipi2	NP_848485.1	ILMN_2784957	003940424	S	3698	AGGTCAGCACTCACTGTTGGGATGCACACGGTAGAGCCAAGCCTCAGCAG	5	+	142921630-142921679	5qG2	Mus musculus WD repeat domain, phosphoinositide interacting 2 (Wipi2), mRNA.				1110018O08Rik; 2510001I10Rik	1110018O08Rik; 2510001I10Rik
Mus musculus	RefSeq	ILMN_216795	ILMN_216795	SH3BP1	NM_009164.2	NM_009164.2		20401	85838508	NM_009164.2	Sh3bp1	NP_033190.2	ILMN_3162930	006900750	I	1702	GACTTGCCCAAACCAACTTCTCCCAAGGTCAGCAGGAACCCCACCGAAAC	15	+	78740448-78740497	15qE1	Mus musculus SH3-domain binding protein 1 (Sh3bp1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IPI]	3BP-1	3BP-1
Mus musculus	RefSeq	ILMN_199133	ILMN_199133	LOC327936	XM_286331.2	XM_286331.2			38091381	XM_286331.2	LOC327936		ILMN_1229062	006250053	S	412	AGTCCTCCCGAAAACAACATGGCCAGGAGGATCTGTATTGGCTCACGGGG										
Mus musculus	MEEBO	ILMN_223937	ILMN_223937	PSMD14	scl20874.15.4_12				10946951	NM_021526	Psmd14		ILMN_2771815	007160019	S	1319	TCCGGGTTTTGCAGATTCCAAAGTTGTTCAGGAATACATCAAAGTGAACA						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence ISS]		Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence ISS]		
Mus musculus	RefSeq	ILMN_215573	ILMN_215573	SCML4	NM_172938.2	NM_172938.2		268297	34328393	NM_172938.2	Scml4	NP_766526.2	ILMN_2661185	006060113	S	3760	GGCTGCCACATCACAGAAGGCCCAGCGGAACCAATTCTTCTTGCCTGTTT	10	+	42679808-42679857	10qB2	Mus musculus sex comb on midleg-like 4 (Drosophila) (Scml4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		mFLJ00197; MGC49264; 9330161D17	mFLJ00197; MGC49264; 9330161D17
Mus musculus	RefSeq	ILMN_196347	ILMN_196347	6530418L21RIK	NM_175398.3	NM_175398.3		109050	34328420	NM_175398.3	6530418L21Rik	NP_780607.2	ILMN_2747792	004900044	S	97	GGGCGAATGACAAAGGAGAGCAAGGACATGGACTGCTATCTGCGTCGCCT	3	+	105507691-105507740	3qF2.2	Mus musculus RIKEN cDNA 6530418L21 gene (6530418L21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196347	ILMN_196347	6530418L21RIK	NM_175398.3	NM_175398.3		109050	34328420	NM_175398.3	6530418L21Rik	NP_780607.2	ILMN_2688257	001500142	S	3129	CACATCTACCAAGGCACACAAAGAAATGCAGTGAACAGAGTCAGGGGACC	3	+	105522266-105522315	3qF2.2	Mus musculus RIKEN cDNA 6530418L21 gene (6530418L21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196347	ILMN_196347	6530418L21RIK	NM_175398.3	NM_175398.3		109050	34328420	NM_175398.3	6530418L21Rik	NP_780607.2	ILMN_2885123	004830431	S	3048	CATGACAGACTCCTTGCTTGTCTGGGCACTGTAATAGAAGGTGAGAACTC	3	+	105522185-105522234	3qF2.2	Mus musculus RIKEN cDNA 6530418L21 gene (6530418L21Rik), mRNA.					
Mus musculus	Riken	ILMN_204781	ILMN_204781	C130020O07RIK	ri|C130020O07|PX00168O06|AK047905|3840					AK047905	C130020O07Rik		ILMN_2567559	000830674	S	3604	GTCTGTGTCTGTGTGTCTGTCTGTATCTGTGTCTGAGTTTAAGAGGACCC										
Mus musculus	MEEBO	ILMN_214920	ILMN_214920	4933401L05RIK	scl51196.2.1_40				51771092	XM_484753	4933401L05Rik		ILMN_1215036	002680743	S	3637	GGCTTATAGGCTGAAATTTGGAAAAGATGGAGAAGAAATATAAACACTGG										
Mus musculus	RefSeq	ILMN_197915	ILMN_242688	EG433865	XM_485586.4	XM_485586.4		433865	94374638	XM_485586.4	EG433865	XP_485586.2	ILMN_1213020	001850307	S	357	GTGCCTAAAGAGCACTGGAACCCTGAAGGACATAGCATTGTTGGGTTCAG	5	-	30121353-30121402	5qB1	PREDICTED: Mus musculus predicted gene, EG433865 (EG433865), mRNA.					
Mus musculus	MEEBO	ILMN_211003	ILMN_211003	C130071C03RIK	scl44565.1.1_177	NM_177100.2			31342806	NM_177100.2	C130071C03Rik		ILMN_1253425	003060008	S	3031	GGGTAACCAGTGAATGACCAAGTTTCATTGTGCCCGTCTAAGTCGATTGA										
Mus musculus	RefSeq	ILMN_200045	ILMN_200045	LOC384180	XM_357472.1	XM_357472.1			38080003	XM_357472.1	LOC384180		ILMN_1229413	003450402	S	360	GAACGGGAGGAGTGAAAGTAAACAGGAAGGCGAGAGCCTCACACAAGGCT										
Mus musculus	MEEBO	ILMN_212447	ILMN_212447	A830006N08RIK	scl40236.1.295_31	NM_183173.1			34147210	NM_183173.1	A830006N08Rik		ILMN_2626556	006650181	S	3418	TCAGTGAGACCTTTGAAATCATTAAAGGCATCCTAATCGTCAATTATGGA										
Mus musculus	Riken	ILMN_206901	ILMN_206901	LY108	ri|F830014N06|PL00005D05|AK089750|998					AK089750	Ly108		ILMN_1217527	004560598	S	632	CAGGAGATCAAGCAATGGCTACTAACACAGACCTAGCCCCGAGAGAATTC										
Mus musculus	RefSeq	ILMN_203593	ILMN_252612	UNC5C	NM_009472.3	NM_009472.3		22253	145966720	NM_009472.3	Unc5c	NP_033498.1	ILMN_2558487	004670097	S	3078	CAGATATAACCACCAAGGTACACGCCCACTTCATTCGGACAGCACCACCG				3qH1	Mus musculus unc-5 homolog C (C. elegans) (Unc5c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A transmembrane receptor activity that responds to the netrin family of ligands and results in chemotaxis when activated [goid 5042] [evidence IDA]	B130051O18Rik; Unc5h3; 6030473H24; rcm; AI047720	B130051O18Rik; Unc5h3; 6030473H24; rcm; AI047720
Mus musculus	RefSeq	ILMN_188618	ILMN_252612	UNC5C	NM_009472.3	NM_009472.3		22253	145966720	NM_009472.3	Unc5c	NP_033498.1	ILMN_2461668	002230603	S	9063	CTAATGACCCCCAGTGGCTGCGGAGTGCTCTCCAGCATTCTGCTCATCCT				3qH1	Mus musculus unc-5 homolog C (C. elegans) (Unc5c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; A transmembrane receptor activity that responds to the netrin family of ligands and results in chemotaxis when activated [goid 5042] [evidence IDA]	B130051O18Rik; Unc5h3; 6030473H24; rcm; AI047720	B130051O18Rik; Unc5h3; 6030473H24; rcm; AI047720
Mus musculus	MEEBO	ILMN_190060	ILMN_190060	9626978_121	9626978_121						9626978_121		ILMN_2466833	000130687	S	9	GGTGGGGTTTGAAGGCCACCAGTGTAGGTTCCAAAGTATCTTGTATTCTC										
Mus musculus	RefSeq	ILMN_214942	ILMN_311554	LOC100046802	XM_001476835.1	XM_001476835.1		100046802	149240747	XM_001476835.1	LOC100046802	XP_001476885.1	ILMN_2653725	004540372	S	3352	GCTTTCAATGTTTGCACTGATCTAGTTGCATGGTTAGTCAGAAACTGCCA					PREDICTED: Mus musculus similar to Inhbb protein (LOC100046802), mRNA.					
Mus musculus	RefSeq	ILMN_216548	ILMN_216548	BC016495	NM_145497.2	NM_145497.2		225994	133891683	NM_145497.2	BC016495	NP_663472.1	ILMN_1242106	006180608	S	861	GCCGTCAGACAGAAACCCCTCCTGAAAGCAAGAATGGCTTGACCTCACCC	19	+	18725905-18725954	19qB	Mus musculus cDNA sequence BC016495 (BC016495), mRNA.		The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + N-ribosylnicotinamide = ADP + nicotinamide ribonucleotide [goid 50262] [evidence IEA]	D630020N23Rik; AA408380; MGC25909	D630020N23Rik; AA408380; MGC25909
Mus musculus	RefSeq	ILMN_212035	ILMN_212035	PHF21A	NM_138755.1	NM_138755.1		192285	20270290	NM_138755.1	Phf21a	NP_620094.1	ILMN_2622001	006480349	S	1796	ACCTGTGGACTCAGAGGCCACGGCGGGGGCCCTCTCCAATGGCCCAGACT	2	+	92200462-92200511	2qE1	Mus musculus PHD finger protein 21A (Phf21a), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC29190; PFTF1; Bhc; Bhc80; 80kDa; D030065N23Rik	MGC29190; PFTF1; Bhc; Bhc80; 80kDa; D030065N23Rik
Mus musculus	RefSeq	ILMN_253180	ILMN_253180	TDRD1	NM_001002240.1	NM_001002240.1		83561	50355699	NM_001002240.1	Tdrd1	NP_001002240.1	ILMN_3132549	004060131	A	3208	GGGGCCGATGGAGCTGAATGGAAGCTGTTCGCAGTTAGTGATGGAGCTGC	19	+	56938928-56938929:56940265-56940312	19qD2	Mus musculus tudor domain containing 1 (Tdrd1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes [goid 43186] [evidence IDA]; A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182) [goid 33391] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MTR-1	MTR-1
Mus musculus	Riken	ILMN_201804	ILMN_201804	PDGFRA	ri|2610011K04|ZX00060B16|AK011378|603					AK011378	Pdgfra		ILMN_2544724	000150017	S	259	ACCTGGGTCCAAAGGGGGGCGAGATGAAACCAACAGGAACTTTTGATGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]	Interacting selectively with platelet-derived growth factor [goid 48407] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_212405	ILMN_212405	A630082N15RIK	scl00320366.1_211	NM_177144.2			31342903	NM_177144.2	A630082N15Rik		ILMN_2626051	001230437	S	1518	GTAGTCTTGTGGTTTGTCTTCACTGCTTGGGAAGAATGTGAACGCACCTT										
Mus musculus	RefSeq	ILMN_219771	ILMN_219771	SLC37A3	NM_028123.2	NM_028123.2		72144	71143149	NM_028123.2	Slc37a3	NP_082399.2	ILMN_2722497	003890491	S	1283	CGGACCATCCAATATGGTTAGCTCTGCTATTTCTGCAGACTTGGGTCGCC	6	-	39294340-39294389	6qB1	Mus musculus solute carrier family 37 (glycerol-3-phosphate transporter), member 3 (Slc37a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AU044904; MGC106297; 2610507O21Rik	AU044904; MGC106297; 2610507O21Rik
Mus musculus	RefSeq	ILMN_219771	ILMN_219771	SLC37A3	NM_028123.2	NM_028123.2		72144	71143149	NM_028123.2	Slc37a3	NP_082399.2	ILMN_2713419	004070403	S	2187	GGAGCAGTCTTCTGTTTGTGGACTATTATATTTCAGACATTCCAGTATGG	6	-	39286534-39286583	6qB1	Mus musculus solute carrier family 37 (glycerol-3-phosphate transporter), member 3 (Slc37a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AU044904; MGC106297; 2610507O21Rik	AU044904; MGC106297; 2610507O21Rik
Mus musculus	MEEBO	ILMN_187448	ILMN_187448	4930404N11RIK	scl00116970.1_109				51765758	XM_125716	4930404N11Rik		ILMN_1253019	000060280	S	19	GCTCGGGATACACACAAGAATCATGAAAGGGAGGGCATTCAGGCACATGG										
Mus musculus	MEEBO	ILMN_218523	ILMN_218523	CIP4	scl0001699.1_56				23573419	AF502565	Cip4		ILMN_1245629	005340367	S	1047	TCATCCCCCCGTTCTGGCCGCGACCCCTTGGCCATACTGAGCGAGATCAG										
Mus musculus	RefSeq	ILMN_211287	ILMN_211287	POLA2	NM_008893.2	NM_008893.2		18969	31982106	NM_008893.2	Pola2	NP_032919.2	ILMN_2614304	000670291	S	2119	GCCCAGGTATGGCTCTCTGGTGGCCAAACTGTTGGAGTACCTGACAAGGA	19	-	5940762-5940811	19qA	Mus musculus polymerase (DNA directed), alpha 2 (Pola2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which catalyzes the synthesis of an RNA primer on the lagging strand of replicating DNA; the smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis [goid 5658] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IDA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IDA]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	AI573378	AI573378
Mus musculus	RefSeq	ILMN_213153	ILMN_213153	IDUA	NM_008325.1	NM_008325.1		15932	6680348	NM_008325.1	Idua	NP_032351.1	ILMN_2676925	004490598	S	164	CCTCACGACCAGGCTGACCAGTACGACCTTAGTTGGGACCAGCAACTGAA	5	+	108910431-108910480	5qF	Mus musculus iduronidase, alpha-L- (Idua), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; Any biological process involved in the maintenance of an internal equilibrium of a chemical [goid 48878] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the hydrolysis of alpha-L-iduronosidic linkages in desulfated dermatan [goid 3940] [evidence IEA]	6030426D08	6030426D08
Mus musculus	RefSeq	ILMN_213153	ILMN_213153	IDUA	NM_008325.1	NM_008325.1		15932	6680348	NM_008325.1	Idua	NP_032351.1	ILMN_2980466	001780709	S	2697	CCAGCCGCCATGACCTTTCTCCTAGGCTGGTGTCTTGGGCTTCCTATTGA	5	+	108924442-108924491	5qF	Mus musculus iduronidase, alpha-L- (Idua), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; Any biological process involved in the maintenance of an internal equilibrium of a chemical [goid 48878] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the hydrolysis of alpha-L-iduronosidic linkages in desulfated dermatan [goid 3940] [evidence IEA]	6030426D08	6030426D08
Mus musculus	MEEBO	ILMN_208946	ILMN_208946	PIGL	scl0327942.7_271	NM_199026.1			39841050	NM_199026.1	Pigl		ILMN_2591056	006250288	S	3123	AGTCTAGAGAAGCTGTACCTTATCATCATGGTGGTTCTGCTGTGTGTGGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acetyl-D-glucosaminylphosphatidylinositol + H2O = D-glucosaminylphosphatidylinositol + acetate. The second step enzyme catalyzing the biosynthesis of glycosylphosphatidylinositol (GPI), used to anchor various eukaryotic proteins to the cell-surface membrane. Catalyzes the N-deacetylation of GlcNAc-PI to GlcN-PI [goid 225] [evidence ISO]		
Mus musculus	MEEBO	ILMN_221603	ILMN_221603	NCAM2	scl017968.15_0	NM_010954.2			31543311	NM_010954.2	Ncam2		ILMN_1216154	001070161	S	4642	CAGTGATGGAGCTTAGCGGATTTGCATGCTTTCCCAGTTTATCTGTATGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189658	ILMN_189658	VDAC3	NM_011696.1	NM_011696.1		22335	6755966	NM_011696.1	Vdac3	NP_035826.1	ILMN_2956765	005720278	S	509	GGCCTTTGAAGGTTGGCTTGCTGGCTATCAGATGAGTTTTGACACAGCCA	8	-	23690881-23690930	8qA2	Mus musculus voltage-dependent anion channel 3 (Vdac3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Catalysis of the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion [goid 8308] [evidence IEA]	MGC102096	MGC102096
Mus musculus	RefSeq	ILMN_255520	ILMN_255520	D630042F21RIK	NM_001081186.1	NM_001081186.1		330428	124487150	NM_001081186.1	D630042F21Rik	NP_001074655.1	ILMN_3118298	001430379	A	913	CTCTTCGCATGAGCCGCTTCACAGTCGCAAGGTGTGGGCAGAAAGTTCCT	6	+	129467283-129467332	6qF3	Mus musculus RIKEN cDNA D630042F21 gene (D630042F21Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222762	ILMN_222762	EXOSC8	NM_027148.2	NM_027148.2		69639	40254485	NM_027148.2	Exosc8	NP_081424.2	ILMN_2754369	004670451	S	1116	GGACTGCATGAGTCGAGCGGTAACGAGACACAAAGAAGTGAGCAAGCTAC	3	-	54532734-54532783	3qC	Mus musculus exosome component 8 (Exosc8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [evidence IEA]	2310032N20Rik; CIP3; KIAA4013; mKIAA4013	2310032N20Rik; CIP3; KIAA4013; mKIAA4013
Mus musculus	Riken	ILMN_205842	ILMN_205842	A730023A08RIK	ri|A730023A08|PX00149L18|AK042770|969					AK042770	A730023A08Rik		ILMN_1223534	000010047	S	598	CGAGGTGATCTTGGGCACTGTAAGCTCCAGTGTGGGGAAAGCTTCCTTCC										
Mus musculus	RefSeq	ILMN_257124	ILMN_257124	OLFR452	NM_001011869.1	NM_001011869.1		258207	58801491	NM_001011869.1	Olfr452	NP_001011869.1	ILMN_3162117	007560180	S	662	TCATCTCCACCATTCTGAAAATCCAGTCTACAGAGGGAAGGAGGAAGGCC	6	+	42740701-42740750	6qB2.1	Mus musculus olfactory receptor 452 (Olfr452), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR257-5P	MOR257-5P
Mus musculus	RefSeq	ILMN_223459	ILMN_223459	EG329541	NM_177849.2	NM_177849.2		329541	31342850	NM_177849.2	EG329541	NP_808517.1	ILMN_2866220	001050603	S	1314	TGCCTCCTCTGATGGGCGCTGGGTCAGTGTGTATGCTCTGCCTTACCTCC	2	+	153486474-153486523	2qH1	Mus musculus predicted gene, EG329541 (EG329541), mRNA.				A630008I04	A630008I04
Mus musculus	RefSeq	ILMN_215662	ILMN_242199	OLFR117	NM_207155.1	NM_207155.1		258263	46391062	NM_207155.1	Olfr117	NP_997038.1	ILMN_2662165	006270523	S	722	GATCTCACCTAATTGTAGTAGTACTATTTTATGGCACAAGCACTGCTGTC	17	-	37802349-37802398	17qB1	Mus musculus olfactory receptor 117 (Olfr117), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR256-33	MOR256-33
Mus musculus	RefSeq	ILMN_221923	ILMN_221923	RAB43	NM_133717.2	NM_133717.2		69834	86476067	NM_133717.2	Rab43	NP_598478.1	ILMN_3076397	002340040	I	78	AGCGGTTGTGAGTCAGCTGTTTAATGGTGTGTTCTACAGGCTGGAGGCCA	6	-	87759621-87759648:87759649-87759670	6qD1	Mus musculus RAB43, member RAS oncogene family (Rab43), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW490415; 1810048P08Rik; MGC6993; 2500004H21Rik	AW490415; 1810048P08Rik; MGC6993; 2500004H21Rik
Mus musculus	RefSeq	ILMN_221923	ILMN_221923	RAB43	NM_133717.2	NM_133717.2		69834	86476067	NM_133717.2	Rab43	NP_598478.1	ILMN_3155342	002230184	A	4005	ACAGGCCCCAACTGGAGGGGATCTACCCGAAACCCCTGGTTCACACTGAA	6	-	87739100-87739149	6qD1	Mus musculus RAB43, member RAS oncogene family (Rab43), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW490415; 1810048P08Rik; MGC6993; 2500004H21Rik	AW490415; 1810048P08Rik; MGC6993; 2500004H21Rik
Mus musculus	Riken	ILMN_204937	ILMN_204937	TCF4	ri|D230024C20|PX00188K18|AK051958|1830					AK051958	Tcf4		ILMN_1225984	006550180	S	1532	AAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCTGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221315	ILMN_221315	DMRT1	NM_015826.4	NM_015826.4		50796	146134436	NM_015826.4	Dmrt1	NP_056641.2	ILMN_2733843	006940554	S	1543	GGGGAGGATCTTCCAGAGAAAAGAATTGACTGTATGCCCAAGTTACAATT				19qB-qC1	Mus musculus doublesex and mab-3 related transcription factor 1 (Dmrt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186292	ILMN_186292	SCL0002012.1_0	scl0002012.1_0	AK047716.1			26338929	AK047716.1	scl0002012.1_0		ILMN_2434274	002810196	S	3	GGACCACGGGTTTACCATCAAGAGATCAGGGTCTTTGGACTACTACCAAC										
Mus musculus	RefSeq	ILMN_216652	ILMN_240146	ABCA12	XM_001002308.2	XM_001002308.2		74591	149233924	XM_001002308.2	Abca12	XP_001002308.2	ILMN_1228438	003800041	S	1072	GGTGCTGTCCTTTTTCTCTCAAGTGCAGCAGCAAAGAGAAGTGTGGCAAC	1	-	71393238-71393287	1qC3	PREDICTED: Mus musculus ATP-binding cassette, sub-family A (ABC1), member 12, transcript variant 3 (Abca12), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_209848	ILMN_240146	ABCA12	XM_001002308.2	XM_001002308.2		74591	149233924	XM_001002308.2	Abca12	XP_001002308.2	ILMN_2599768	000670121	S	8202	GCACGGCAAGGGTACAGCGTAAGACTGACAAATGATAATGGACATCCGTG	1	-	71289726-71289775	1qC3	PREDICTED: Mus musculus ATP-binding cassette, sub-family A (ABC1), member 12, transcript variant 3 (Abca12), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_202358	ILMN_202358	4930500N06RIK	ri|4930500N06|PX00032H21|AK015671|847					AK015671	4930500N06Rik		ILMN_1237898	005560196	S	38	CCTGTGAAAAGGCAGTTGGGTTGTGTCTCTCAAACCATGGTCATCTGTCG										
Mus musculus	MEEBO	ILMN_196187	ILMN_196187	CACNA1E	scl16128.16.1_301				18490975	NM_009782	Cacna1e		ILMN_2756414	002650008	S	9379	CCTGTGTGCTCAGGGGCAGCTAAGAATACAAGCATGATCCTAAGGGAACG						A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]		
Mus musculus	MEEBO	ILMN_196187	ILMN_196187	CACNA1E	scl16128.16.1_301				18490975	NM_009782	Cacna1e		ILMN_1218344	000050632	S	14	CACACTAGTTAGTTAACTATGTATCTATATACAGCAGAGCCTACCATGTC						A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]		
Mus musculus	RefSeq	ILMN_215001	ILMN_215001	RYA3	NM_194357.1	NM_194357.1		378700	35902743	NM_194357.1	Rya3	NP_919338.2	ILMN_2654377	001300452	S	1460	CCTGGAGGTTGGAATTCCCCTGCCTAAGATTCTCAATGTCAACTTTGCCA	2	+	153757630-153757679	2qH1	Mus musculus antimicrobial peptide RYA3 (Rya3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212634	ILMN_212634	SERPINC1	NM_080844.3	NM_080844.3		11905	133891817	NM_080844.3	Serpinc1	NP_543120.1	ILMN_2628681	001690128	S	1424	GGAGAGTGGCTAATCCTTGTGTGAACTAAAATATTCTTAATCTTTGCACC	1	+	162932566-162932594:162932595-162932615	1qH2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 (Serpinc1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	AI114908; ATIII; At3; At-3	AI114908; ATIII; At3; At-3
Mus musculus	MEEBO	ILMN_222578	ILMN_222578	A030005K14RIK	scl16547.1.1_29	NM_030005.1			13386447	NM_030005.1	A030005K14Rik		ILMN_2751794	004880014	S	734	GGCTACTCTTGCCTGCCACTCCTGATTAATGCCCTGCTAATGAGATTGTT										
Mus musculus	Riken	ILMN_205660	ILMN_205660	A830019B06RIK	ri|A830019B06|PX00154N11|AK043675|2588					AK043675	A830019B06Rik		ILMN_1245870	002190592	S	2147	TGCCACCAATCCTGACTAGATGAGTTCAATTCCAGGGACCCACATGGTGG										
Mus musculus	RefSeq	ILMN_220228	ILMN_220228	OLFR824	NM_146674.1	NM_146674.1		258669	22380652	NM_146674.1	Olfr824	NP_666885.1	ILMN_2719426	000380646	S	897	GGTAAAAAGTGCTTTGAAGAAGACATTGCTGAGAAAAATATCCTGGCAGT	10	-	129563165-129563214	10qD3	Mus musculus olfactory receptor 824 (Olfr824), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR210-3	MOR210-3
Mus musculus	MEEBO	ILMN_211528	ILMN_211528	4930417M19RIK	scl00320571.1_78	NM_177195.2			31343034	NM_177195.2	4930417M19Rik		ILMN_2616700	001580687	S	2095	GATATGCCCGGGACATCCCACTGGAGAAAACTGATACCAATTGTTAGTCG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215254	ILMN_215254	RPS6KB1	NM_028259.1	NM_028259.1		72508	29789224	NM_028259.1	Rps6kb1	NP_082535.1	ILMN_1243540	001410564	S	2930	GAGCCATTGCCTTTTGTCTGAAAGGAACCTTCAGTGATAGGGGCCCTTGC	11	-	86330448-86330497	11qC	Mus musculus ribosomal protein S6 kinase, polypeptide 1 (Rps6kb1), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	p70s6k; 70kDa; 4732464A07Rik; S6K1; AI314060; 2610318I15Rik; AI256796; AA959758; p70/85s6k	p70s6k; 70kDa; 4732464A07Rik; S6K1; AI314060; 2610318I15Rik; AI256796; AA959758; p70/85s6k
Mus musculus	RefSeq	ILMN_215254	ILMN_215254	RPS6KB1	NM_028259.1	NM_028259.1		72508	29789224	NM_028259.1	Rps6kb1	NP_082535.1	ILMN_2866146	000540465	S	3076	GGTTATCCTATGCAAATTTTAGTTCTTTTCCTTCACTGGCAGCTTTTGGC	11	-	86330302-86330351	11qC	Mus musculus ribosomal protein S6 kinase, polypeptide 1 (Rps6kb1), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	p70s6k; 70kDa; 4732464A07Rik; S6K1; AI314060; 2610318I15Rik; AI256796; AA959758; p70/85s6k	p70s6k; 70kDa; 4732464A07Rik; S6K1; AI314060; 2610318I15Rik; AI256796; AA959758; p70/85s6k
Mus musculus	RefSeq	ILMN_187854	ILMN_187854	TRPM6	NM_153417.1	NM_153417.1		225997	23510304	NM_153417.1	Trpm6	NP_700466.1	ILMN_3060635	000830608	I	6234	CCATCACCATGACTTTACAATGTGGACCTCCCTGGAAGTGCCCTCTGAGC	19	+	18966726-18966775	19qB	Mus musculus transient receptor potential cation channel, subfamily M, member 6 (Trpm6), mRNA.	The portion of the plasma membrane surrounding the brush border [goid 31526] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]	TRPM6/CHAK2; CHAK2	TRPM6/CHAK2; CHAK2
Mus musculus	RefSeq	ILMN_187854	ILMN_187854	TRPM6	NM_153417.1	NM_153417.1		225997	23510304	NM_153417.1	Trpm6	NP_700466.1	ILMN_3138046	005700364	A	5952	CATTGCAAAACATCGCTGCAACTCCTGCTGTGGGAAGCTCAGACTGCCGG	19	+	18963482-18963531	19qB	Mus musculus transient receptor potential cation channel, subfamily M, member 6 (Trpm6), mRNA.	The portion of the plasma membrane surrounding the brush border [goid 31526] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]	TRPM6/CHAK2; CHAK2	TRPM6/CHAK2; CHAK2
Mus musculus	RefSeq	ILMN_187854	ILMN_187854	TRPM6	NM_153417.1	NM_153417.1		225997	23510304	NM_153417.1	Trpm6	NP_700466.1	ILMN_2447694	005550204	S	4919	CCACTGAAGAGTTCAGCAAGAAATGGCTCTCTGTATCCAACTTCAGCCAG	19	+	18936725-18936774	19qB	Mus musculus transient receptor potential cation channel, subfamily M, member 6 (Trpm6), mRNA.	The portion of the plasma membrane surrounding the brush border [goid 31526] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]	TRPM6/CHAK2; CHAK2	TRPM6/CHAK2; CHAK2
Mus musculus	RefSeq	ILMN_210024	ILMN_210024	4931406P16RIK	NM_172741.2	NM_172741.2		233103	118129971	NM_172741.2	4931406P16Rik	NP_766329.1	ILMN_2601441	001440142	S	5374	GCAGTACTCTCATTTTCATAGTGCCTCCCTGAAGACCTCACCTTGGGCCA	7	-	35022117-35022166	7qB1	Mus musculus RIKEN cDNA 4931406P16 gene (4931406P16Rik), mRNA.				AA553327; mKIAA0355	AA553327; mKIAA0355
Mus musculus	RefSeq	ILMN_213025	ILMN_213025	BPI	NM_177850.3	NM_177850.3		329547	142386031	NM_177850.3	Bpi	NP_808518.1	ILMN_2632770	004670609	S	1502	TACACCTTATCTAAGATATCACCTTGGACCCTGGGCCAGGAAGCTCTGCA	2	+	158109990-158110003:158110004-158110039	2qH1	Mus musculus bactericidal permeablility increasing protein (Bpi), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			9230105K17Rik	9230105K17Rik
Mus musculus	RefSeq	ILMN_213022	ILMN_225823	LOC640563	XM_917586.2	XM_917586.2		640563	94385706	XM_917586.2	LOC640563	XP_922679.1	ILMN_2632741	005090041	S	5871	GGTACCCTTGTTTGTTCAGCAGGAGGAACTGTAGAGCCAACCATTTCTGG					PREDICTED: Mus musculus hypothetical LOC640563 (LOC640563), mRNA.					
Mus musculus	RefSeq	ILMN_186725	ILMN_238737	MNDA	NM_001033450.3	NM_001033450.3		381308	149274641	NM_001033450.3	Mnda	NP_001028622.1	ILMN_2702600	001710619	S	1476	ATGTCACCTCTAAATGACAGCTTTAGTAGTATATCCAACCATTGATTAAT				1qH3	Mus musculus myeloid cell nuclear differentiation antigen (Mnda), mRNA.				A730048F03	A730048F03
Mus musculus	RefSeq	ILMN_199131	ILMN_199131	LOC237769	XM_137597.7	XM_137597.7		237769	94390121	XM_137597.7	LOC237769	XP_137597.5	ILMN_1249643	001190204	S	596	GGGAGCCCAGTGAGATGCAGGCTAGAAAGGAACTTGGCCTTCCTGATGTA	11	+	58674653-58674702		PREDICTED: Mus musculus similar to RIKEN cDNA 2810021J22 (LOC237769), mRNA.					
Mus musculus	MEEBO	ILMN_184803	ILMN_184803	1700084M14RIK	scl073487.2_23						1700084M14Rik		ILMN_2421705	005130035	S	7	AACCCAAGACAGTGAAGATTTGCCATCGTCAGCCCTGTTCCAAATGTAGC										
Mus musculus	Riken	ILMN_204254	ILMN_204254	A830062B14RIK	ri|A830062B14|PX00156I24|AK043975|1083					AK043975	A830062B14Rik		ILMN_1230823	003310112	S	637	ATGGAAGAGCGGGCCAAATTCACTGCTTTCTGTGAGACTTTAGAAGAGAC										
Mus musculus	RefSeq	ILMN_211873	ILMN_211873	TEX14	NM_031386.1	NM_031386.1		83560	13878214	NM_031386.1	Tex14	NP_113563.1	ILMN_2620323	005900541	S	4083	AGCGACTTGTCAGACTGATTGGAACTGGACCGTGCAAGCATTGTGGCTGT	11	+	87369206-87369255	11qC	Mus musculus testis expressed gene 14 (Tex14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	C85585	C85585
Mus musculus	RefSeq	ILMN_194488	ILMN_240641	NTRK2	NM_008745.2	NM_008745.2		18212	68215980	NM_008745.2	Ntrk2	NP_032771.1	ILMN_2705460	004670750	S	2331	TGCCTCTCTAATGAAAAGCGAGCTGTTTGACTATACGGAAAATGTGCTGA	13	+	59033720-59033769	13qB1-qB2	Mus musculus neurotrophic tyrosine kinase, receptor, type 2 (Ntrk2), transcript variant 2, mRNA.	Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IMP]; Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light [goid 46548] [evidence IMP]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	trkB; C030027L06Rik; AI848316; Tkrb	trkB; C030027L06Rik; AI848316; Tkrb
Mus musculus	RefSeq	ILMN_221146	ILMN_221146	PFKFB3	NM_133232.2	NM_133232.2		170768	87298846	NM_133232.2	Pfkfb3	NP_573495.2	ILMN_2860174	006650546	S	4721	CATGTGCACGGGGGTTCACACATGTAGGGGTCAGAGGACAGCTTGACAGG	2	-	11393282-11393331	2qA1	Mus musculus 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (Pfkfb3), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 2,6-bisphosphate [goid 3873] [evidence IEA]; Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 4331] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	iPFK-2; E330010H22Rik	iPFK-2; E330010H22Rik
Mus musculus	RefSeq	ILMN_217035	ILMN_240277	TMEM70	NM_026392.1	NM_026392.1		70397	117647264	NM_026392.1	Tmem70	NP_080668.1	ILMN_2678389	001990239	S	1277	TGTAAAATGTGGATGGTCATGAATATTCTGGTATATGTATGGCTACATTT	1	+	16667901-16667950	1qA3	Mus musculus transmembrane protein 70 (Tmem70), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2210416J16Rik; 1110020A09Rik	2210416J16Rik; 1110020A09Rik
Mus musculus	RefSeq	ILMN_208663	ILMN_208663	6330512M04RIK	NM_177265.4	NM_177265.4		320802	146198822	NM_177265.4	6330512M04Rik	NP_796239.1	ILMN_2588346	006290341	S	3145	GACCCTGAGGTAGGGATGGGAAGGGTGCAACAGAGAGCCAGTGAACATGC				7qF5	Mus musculus RIKEN cDNA 6330512M04 gene (6330512M04Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI848576	AI848576
Mus musculus	RefSeq	ILMN_219250	ILMN_219250	4930555I21RIK	NM_030189.2	NM_030189.2		78806	141801735	NM_030189.2	4930555I21Rik	NP_084465.1	ILMN_1258302	000380441	S	2293	TGTGATCTTCAGATTCCCTCAAGCCAAAGCTTTGGAATGGCGAGGTAGCC	4	+	135093631-135093680	4qD3	Mus musculus RIKEN cDNA 4930555I21 gene (4930555I21Rik), mRNA.				4930403G18Rik; RP23-321M9.1	4930403G18Rik; RP23-321M9.1
Mus musculus	RefSeq	ILMN_192023	ILMN_242365	BC021891	NM_145608.2	NM_145608.2		234878	119637820	NM_145608.2	BC021891	NP_663583.2	ILMN_2588383	005080373	S	3447	ACGTATGTCCTGCCCATGAGGACACAATTGGCGAAACTGCAATGGCCGAT	8	+	128469094-128469143	8qE2	Mus musculus cDNA sequence BC021891 (BC021891), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	mKIAA1804; KIAA1804; MGC27778	mKIAA1804; KIAA1804; MGC27778
Mus musculus	RefSeq	ILMN_192023	ILMN_242365	BC021891	NM_145608.2	NM_145608.2		234878	119637820	NM_145608.2	BC021891	NP_663583.2	ILMN_1251067	007650367	S	5599	CTGGGGTCCGGACACGCTATGATCAGAAGCCTGTGGCTGACAAAAATGTT	8	+	128471246-128471295	8qE2	Mus musculus cDNA sequence BC021891 (BC021891), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	mKIAA1804; KIAA1804; MGC27778	mKIAA1804; KIAA1804; MGC27778
Mus musculus	RefSeq	ILMN_223597	ILMN_223597	TRIM65	NM_178802.2	NM_178802.2		338364	31342204	NM_178802.2	Trim65	NP_848917.1	ILMN_2881791	002450491	S	2833	CAACTTGCAGGAGTCCGATCTCTCCTTCTACCATGTGGGTTCTGGAGTGG	11	-	115941047-115941096	11qE2	Mus musculus tripartite motif-containing 65 (Trim65), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4732463G12Rik	4732463G12Rik
Mus musculus	MEEBO	ILMN_213979	ILMN_213979	GZME	scl0014942.1_42	NM_010373.2			31982792	NM_010373.2	Gzme		ILMN_2642942	001240360	S	475	CTGCCTTCTTCAGTGACATCATGCTGTTAAAGCTGGAGAGTAAGGCCAAG							The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223271	ILMN_223271	4921538N17RIK	scl36345.29.1_111	XM_135216.2			28548893	XM_135216.2	4921538N17Rik		ILMN_2761710	005360603	S	4114	ACGGTTCAGGGGGGGAGTAGGAAGTAAAACCGTGGAGAGGCAAGTGAGAA										
Mus musculus	RefSeq	ILMN_223804	ILMN_233571	GPX6	NM_145451.3	NM_145451.3		75512	146260277	NM_145451.3	Gpx6	NP_663426.2	ILMN_2769507	001850376	S	335	GTCACGGTTTTGGGCTTTCCATGCAACCAGTTTGGAAAGCAAGAACCTGG				13qA3.1	Mus musculus glutathione peroxidase 6 (Gpx6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]	RP23-54E4.7; Ry2d1; olfactory; 1700020G18Rik; MGC19204	RP23-54E4.7; Ry2d1; olfactory; 1700020G18Rik; MGC19204
Mus musculus	RefSeq	ILMN_217631	ILMN_217631	IFNG	NM_008337.1	NM_008337.1		15978	33468858	NM_008337.1	Ifng	NP_032363.1	ILMN_2791459	006280477	S	1012	ACAGCAGGCCAGACAGCACTCGAATGAGTCAGGTAGTAACAGGCTGTCCC	10	+	117848690-117848739	10qD2	Mus musculus interferon gamma (Ifng), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process of apoptosis in inflammatory cells, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage [goid 6925] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45348] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; The process of apoptosis in neutrophils [goid 1781] [evidence IMP]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons [goid 31642] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]	Interacting selectively with the interferon-gamma receptor [goid 5133] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	IFN-gamma; Ifg; IFN-g	IFN-gamma; Ifg; IFN-g
Mus musculus	RefSeq	ILMN_197622	ILMN_197622	LOC381459	XM_358586.1	XM_358586.1			38076916	XM_358586.1	LOC381459		ILMN_2528774	004010148	S	271	TTCTTCAACCAGCCTCGCGTGCCCAAGAACGCGTGGAAGTTTGAGACCTT										
Mus musculus	RefSeq	ILMN_219323	ILMN_219323	SLC44A1	NM_133891.2	NM_133891.2		100434	46358372	NM_133891.2	Slc44a1	NP_598652.2	ILMN_1254938	000290360	S	824	GAAGGTCCCCCAAAGAAGCAGTTATTCCTGAGCAGCTTCAGATAGCTGAG	4	+	53554212-53554261	4qB2	Mus musculus solute carrier family 44, member 1 (Slc44a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of choline into, out of, within or between cells. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 15871] [evidence IDA]	Catalysis of the transfer of choline from one side of the membrane to the other. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 15220] [evidence IDA]	CHTL1; Cdw92; 2210409B22Rik; CTL1; 4833416H08Rik; AW547365	CHTL1; Cdw92; 2210409B22Rik; CTL1; 4833416H08Rik; AW547365
Mus musculus	RefSeq	ILMN_219323	ILMN_219323	SLC44A1	NM_133891.2	NM_133891.2		100434	46358372	NM_133891.2	Slc44a1	NP_598652.2	ILMN_1241827	007380195	S	2632	CTGCCCTGTAGTATCCCAATGGATATCACTCCCAGTCTCAAATTGGGCTG	4	+	53635124-53635173	4qB2	Mus musculus solute carrier family 44, member 1 (Slc44a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of choline into, out of, within or between cells. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 15871] [evidence IDA]	Catalysis of the transfer of choline from one side of the membrane to the other. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 15220] [evidence IDA]	CHTL1; Cdw92; 2210409B22Rik; CTL1; 4833416H08Rik; AW547365	CHTL1; Cdw92; 2210409B22Rik; CTL1; 4833416H08Rik; AW547365
Mus musculus	RefSeq	ILMN_219323	ILMN_219323	SLC44A1	NM_133891.2	NM_133891.2		100434	46358372	NM_133891.2	Slc44a1	NP_598652.2	ILMN_2967904	005270553	S	2471	TGTAGGTATCATTGACGTTTTGACGATGAGGAAAGGAGATGCTCAGAGAG	4	+	53634963-53635012	4qB2	Mus musculus solute carrier family 44, member 1 (Slc44a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of choline into, out of, within or between cells. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 15871] [evidence IDA]	Catalysis of the transfer of choline from one side of the membrane to the other. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine [goid 15220] [evidence IDA]	CHTL1; Cdw92; 2210409B22Rik; CTL1; 4833416H08Rik; AW547365	CHTL1; Cdw92; 2210409B22Rik; CTL1; 4833416H08Rik; AW547365
Mus musculus	RefSeq	ILMN_213668	ILMN_213668	NUP88	NM_172394.2	NM_172394.2		19069	111955408	NM_172394.2	Nup88	NP_765982.2	ILMN_3034381	006020601	I	293	GGTGGCGTGGAGCCTCCTCTCTCCCAGTATCAGAGATTACTCTGCATTAA	11	-	70781502-70781519:70783151-70783182	11qB4	Mus musculus nucleoporin 88 (Nup88), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		88kDa; Nup84; Prei2	88kDa; Nup84; Prei2
Mus musculus	RefSeq	ILMN_213668	ILMN_213668	NUP88	NM_172394.2	NM_172394.2		19069	111955408	NM_172394.2	Nup88	NP_765982.2	ILMN_2639464	004880307	S	2317	AGGAGCATTTTGGATAAGATTTGGTGTGGTTATTCTTTTGTTATTCCTTT	11	-	70760895-70760944	11qB4	Mus musculus nucleoporin 88 (Nup88), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		88kDa; Nup84; Prei2	88kDa; Nup84; Prei2
Mus musculus	RefSeq	ILMN_213668	ILMN_213668	NUP88	NM_172394.2	NM_172394.2		19069	111955408	NM_172394.2	Nup88	NP_765982.2	ILMN_2742498	005080632	S	1353	CTGAGCAGAAATGCTTTGTGGAGCACATTCTTTGTACAAAGCCATTGCCG	11	-	70767709-70767731:70768003-70768029	11qB4	Mus musculus nucleoporin 88 (Nup88), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		88kDa; Nup84; Prei2	88kDa; Nup84; Prei2
Mus musculus	RefSeq	ILMN_213668	ILMN_213668	NUP88	NM_172394.2	NM_172394.2		19069	111955408	NM_172394.2	Nup88	NP_765982.2	ILMN_3108109	002370440	A	2116	GAGTCCTCAGAAACCCACCATTACTCTCAGTGCCTACCAGCGAAAGTGCA	11	-	70761287-70761305:70761229-70761259	11qB4	Mus musculus nucleoporin 88 (Nup88), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		88kDa; Nup84; Prei2	88kDa; Nup84; Prei2
Mus musculus	RefSeq	ILMN_211606	ILMN_211606	G6PD2	NM_019468.1	NM_019468.1		14380	13937388	NM_019468.1	G6pd2	NP_062341.1	ILMN_2617607	004260465	S	825	CCTGCTACCACAGATTCAGATGATGTCCGTAATGAGAAGGTCAAAGTGTT	5	+	62200947-62200996	5qC3.1	Mus musculus glucose-6-phosphate dehydrogenase 2 (G6pd2), mRNA.		The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Gpd2; Gpd-2; G6pdx-ps1	Gpd2; Gpd-2; G6pdx-ps1
Mus musculus	RefSeq	ILMN_211606	ILMN_211606	G6PD2	NM_019468.1	NM_019468.1		14380	13937388	NM_019468.1	G6pd2	NP_062341.1	ILMN_2943790	002190129	S	1490	GGAGAGTGGGCTTCCAGTACAAGGGTACCTACAAGGGTACTCACAAGCAC	5	+	62201612-62201661	5qC3.1	Mus musculus glucose-6-phosphate dehydrogenase 2 (G6pd2), mRNA.		The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Gpd2; Gpd-2; G6pdx-ps1	Gpd2; Gpd-2; G6pdx-ps1
Mus musculus	RefSeq	ILMN_221295	ILMN_221295	D630004A14RIK	NM_198675.2	NM_198675.2		382137	68051722	NM_198675.2	D630004A14Rik	NP_941077.2	ILMN_2733594	006980543	S	1847	CTGGCAGCAGCAATGCAGTCCCAGTTCAGAAAAGAGATTCAAAGACAGCT	9	+	50580644-50580693	9qA5.3	Mus musculus RIKEN cDNA D630004A14 gene (D630004A14Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process of coupling phenylalanine to phenylalanyl-tRNA, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6432] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the reaction: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe) [goid 4826] [evidence IEA]; Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218338	ILMN_218338	PTK6	NM_009184.2	NM_009184.2		20459	133893003	NM_009184.2	Ptk6	NP_033210.1	ILMN_1242418	000840541	S	2080	CAGGCCTTGTGGAGTTCTTTTCATACCACTTTTGGAGCTTGACTGTCCAC	2	-	180929985-180930034	2qH4	Mus musculus PTK6 protein tyrosine kinase 6 (Ptk6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	Tksk; Sik; tks; BRK	Tksk; Sik; tks; BRK
Mus musculus	RefSeq	ILMN_198577	ILMN_253167	EG546954	XM_621774.1	XM_621774.1		546954	63556810	XM_621774.1	EG546954	XP_621774.1	ILMN_1219271	005490338	S	356	ATGTGACCAAAGCCAATACCCTGACAAGGCCTAACAGAGAGAAGAAGGCA	7	+	33950582-33950631	7qB1	PREDICTED: Mus musculus predicted gene, EG546954 (EG546954), mRNA.					
Mus musculus	MEEBO	ILMN_212629	ILMN_212629	FKBP1B	scl42655.4.46_11	NM_016863.2			40254557	NM_016863.2	Fkbp1b		ILMN_1226268	002140754	S	351	AGAGGGCGAAGCTGACCTGCACCCCTGATGTGGCCTATGGAGCTACCGGC							The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with the immunosuppressant FK506 [goid 5528] [evidence ISA]		
Mus musculus	MEEBO	ILMN_184770	ILMN_184770	STX12	scl23721.9_440				31981601	NM_133887	Stx12		ILMN_2421431	004480471	S	11	GGGAAGAGGTAGGAACTTGGCCTGGAGTTGTAGTGGTTTTTGGGAAGCTC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_260959	ILMN_260959	GRAMD2	NM_001033498.1	NM_001033498.1		546134	85702036	NM_001033498.1	Gramd2	NP_001028670.1	ILMN_2898777	000070435	S	1102	GAACAGCAATTATGTTCCCTGAGCTGGGGCAGTCCACTCCCAAGGGACAG	9	+	59563785-59563834	9qB	Mus musculus GRAM domain containing 2 (Gramd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BC064463	BC064463
Mus musculus	RefSeq	ILMN_198933	ILMN_260959	GRAMD2	NM_001033498.1	NM_001033498.1		546134	85702036	NM_001033498.1	Gramd2	NP_001028670.1	ILMN_1215023	001410465	S	1105	CAGCAATTATGTTCCCTGAGCTGGGGCAGTCCACTCCCAAGGGACAGGTA	9	+	59563788-59563834:59564015-59564017	9qB	Mus musculus GRAM domain containing 2 (Gramd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BC064463	BC064463
Mus musculus	RefSeq	ILMN_197037	ILMN_197037	LOC271022	XM_194845.2	XM_194845.2			38073619	XM_194845.2	LOC271022		ILMN_1245682	006510064	S	2156	AGCAGCAGAAAGCTCATGCTCATGGCATAAGTGATGGGCTGGCACAGATC										
Mus musculus	RefSeq	ILMN_223645	ILMN_223645	2310007B03RIK	NM_172411.3	NM_172411.3		71874	141803386	NM_172411.3	2310007B03Rik	NP_765999.2	ILMN_2767039	004730202	S	1866	CCCACCGATCCATCCATTTGATAGCCGAACAGGTACAGCCACGAGACAAC	1	-	95048309-95048358	1qD	Mus musculus RIKEN cDNA 2310007B03 gene (2310007B03Rik), mRNA.				MGC107226	MGC107226
Mus musculus	RefSeq	ILMN_221955	ILMN_216865	HIST1H2BE	NM_178194.3	NM_178194.3		319179	142377782	NM_178194.3	Hist1h2be	NP_835501.1	ILMN_2742592	005700551	S	299	GCAAGAAGCGCAAGCGCAGCCGCAAGGAGAGCTACTCGGTGTACGTGTAC	13	-	23677696-23677745	13qA3.1	Mus musculus histone cluster 1, H2be (Hist1h2be), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217041	ILMN_216865	HIST1H2BE	NM_178194.3	NM_178194.3		319179	142377782	NM_178194.3	Hist1h2be	NP_835501.1	ILMN_1252995	002370524	S	543	CAAGCACGCGGTGTCGGAGGGCACCAAGGCTGTCACCAAGTACACCAGCT	13	-	23677452-23677501	13qA3.1	Mus musculus histone cluster 1, H2be (Hist1h2be), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216865	ILMN_216865	HIST1H2BE	NM_178194.3	NM_178194.3		319179	142377782	NM_178194.3	Hist1h2be	NP_835501.1	ILMN_2676243	006380128	S	2359	GACTGTCTGCTGTGCACTGGCATGTGTACCTCCAAGCCTGCTGCTGTACT	13	-	23675636-23675685	13qA3.1	Mus musculus histone cluster 1, H2be (Hist1h2be), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_207437	ILMN_246490	LOC674611	XM_980076.1	XM_980076.1		674611	94388325	XM_980076.1	LOC674611	XP_985170.1	ILMN_1230139	005390286	S	1622	TCATGCTCCAGGGTCTTGTTAAGTGGCTTGCTTGATCAGGACTCCCTGGC					PREDICTED: Mus musculus similar to zinc finger protein 365, transcript variant 1 (LOC674611), mRNA.					
Mus musculus	RefSeq	ILMN_223508	ILMN_311517	2410124H12RIK	XM_001473308.1	XM_001473308.1		76785	149268238	XM_001473308.1	2410124H12Rik	XP_001473358.1	ILMN_1247719	003520739	S	291	GCTTCCACTTCAGTCTCAGGAACCAGCGTGGCGTGAAGGCACTACTGCTT				16qC4	PREDICTED: Mus musculus RIKEN cDNA 2410124H12 gene (2410124H12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218443	ILMN_218443	NR2F2	NM_183261.3	NM_183261.3		11819	112421173	NM_183261.3	Nr2f2	NP_899084.2	ILMN_3163196	005860709	A	1268	GTACCCCAACCAGCCAACACGGTTCGGAAAGCTCTTGCTTCGTCTCCCTT	7	-	77499682-77499731	7qD1	Mus musculus nuclear receptor subfamily 2, group F, member 2 (Nr2f2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur [goid 9956] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IDA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	COUP-TFII; COUPTFB; EAR3; SVP40; Aporp1; 2700033K02Rik; 9430015G03Rik; Tcfcoup2; ARP-1; COUP-TF2	COUP-TFII; COUPTFB; EAR3; SVP40; Aporp1; 2700033K02Rik; 9430015G03Rik; Tcfcoup2; ARP-1; COUP-TF2
Mus musculus	RefSeq	ILMN_218443	ILMN_218443	NR2F2	NM_183261.3	NM_183261.3		11819	112421173	NM_183261.3	Nr2f2	NP_899084.2	ILMN_3076625	005700348	I	366	CTTTTCCAACGGCTGAGAGCGCCTGGTACACAGGGAAGCAGTTCCTTGAG	7	-	77511217-77511266	7qD1	Mus musculus nuclear receptor subfamily 2, group F, member 2 (Nr2f2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur [goid 9956] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IDA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	COUP-TFII; COUPTFB; EAR3; SVP40; Aporp1; 2700033K02Rik; 9430015G03Rik; Tcfcoup2; ARP-1; COUP-TF2	COUP-TFII; COUPTFB; EAR3; SVP40; Aporp1; 2700033K02Rik; 9430015G03Rik; Tcfcoup2; ARP-1; COUP-TF2
Mus musculus	RefSeq	ILMN_211577	ILMN_218443	NR2F2	NM_183261.3	NM_183261.3		11819	112421173	NM_183261.3	Nr2f2	NP_899084.2	ILMN_2617297	000360181	S	2608	TCTTTGTGTGTTATATTCCAAGGAAATTGAAAGTATTCAGAAATTAAAAT	7	-	77498342-77498391	7qD1	Mus musculus nuclear receptor subfamily 2, group F, member 2 (Nr2f2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur [goid 9956] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IDA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	COUP-TFII; COUPTFB; EAR3; SVP40; Aporp1; 2700033K02Rik; 9430015G03Rik; Tcfcoup2; ARP-1; COUP-TF2	COUP-TFII; COUPTFB; EAR3; SVP40; Aporp1; 2700033K02Rik; 9430015G03Rik; Tcfcoup2; ARP-1; COUP-TF2
Mus musculus	MEEBO	ILMN_186027	ILMN_186027	SCL0001546.1_9	scl0001546.1_9	AK085965.1			26351884	AK085965.1	scl0001546.1_9		ILMN_1223064	006520274	S	16	CACACTGAGAGCTGTTTAAAACTACAGTTCCTCTTTTGGCCCGCTCCCGC										
Mus musculus	RefSeq	ILMN_213725	ILMN_258836	PMPCB	NM_028431.2	NM_028431.2		73078	142357637	NM_028431.2	Pmpcb	NP_082707.1	ILMN_2640122	000450544	S	1434	GCGACTACCAGATTTTAACCAGATTTGTAGTAACATGCGTTGGATTCGTG	5	+	21262808-21262857	5qA3	Mus musculus peptidase (mitochondrial processing) beta (Pmpcb), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	MPP11; 3110004O18Rik; MPPP52; MPPB	MPP11; 3110004O18Rik; MPPP52; MPPB
Mus musculus	RefSeq	ILMN_216364	ILMN_216364	NAT5	NM_026425.1	NM_026425.1		67877	13385921	NM_026425.1	Nat5	NP_080701.1	ILMN_2945073	002900561	S	754	CTCATCCTTCCAATGAGCAATAGCATACATGTTCGAACTGTTTGCCATAG	2	+	145607476-145607525	2qG1	Mus musculus N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) (Nat5), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	D2Ertd186e; MGC144325; AU041458; 1500004D14Rik; 2900026I01Rik	D2Ertd186e; MGC144325; AU041458; 1500004D14Rik; 2900026I01Rik
Mus musculus	RefSeq	ILMN_216364	ILMN_216364	NAT5	NM_026425.1	NM_026425.1		67877	13385921	NM_026425.1	Nat5	NP_080701.1	ILMN_2945066	006220114	S	470	CAGTCATAGAGTACTACTCAGCCAGCAATGGGGAGCCTGATGAGGATGCC	2	+	145607068-145607117	2qG1	Mus musculus N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) (Nat5), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	D2Ertd186e; MGC144325; AU041458; 1500004D14Rik; 2900026I01Rik	D2Ertd186e; MGC144325; AU041458; 1500004D14Rik; 2900026I01Rik
Mus musculus	RefSeq	ILMN_199924	ILMN_318605	LOC100041077	XM_001476560.1	XM_001476560.1		100041077	149253265	XM_001476560.1	LOC100041077	XP_001476610.1	ILMN_1220089	000060377	S	1468	ATGAACACACTCAAGGGTGTAAGGCAGCCAAAGCAGGTCTACTTTGAGAG	4	+	143699065-143699114	4qE1	PREDICTED: Mus musculus similar to preferentially expressed antigen in melanoma like 4 (LOC100041077), mRNA.					
Mus musculus	RefSeq	ILMN_203333	ILMN_229559	IQCH	XM_981814.1	XM_981814.1		78250	94387308	XM_981814.1	Iqch	XP_986908.1	ILMN_1212965	005890050	S	3490	CCCTGATGAGTAAGAGGCAGTACGCAGAGTAAGGGAGTGCGTTCTTCACC				9qC	PREDICTED: Mus musculus IQ motif containing H, transcript variant 3 (Iqch), mRNA.					
Mus musculus	RefSeq	ILMN_199316	ILMN_232962	SUMF2	NM_026445.2	NM_026445.2		67902	142381003	NM_026445.2	Sumf2	NP_080721.1	ILMN_2534816	007380433	S	135	TGGCCGGTTTCTGATGGGGACAGACGCTCCAGATGGCAGAGACGGTGAAG	5	+	130325814-130325863	5qG1.3	Mus musculus sulfatase modifying factor 2 (Sumf2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	2610040F05Rik	2610040F05Rik
Mus musculus	RefSeq	ILMN_200544	ILMN_232962	SUMF2	NM_026445.2	NM_026445.2		67902	142381003	NM_026445.2	Sumf2	NP_080721.1	ILMN_1239103	003830224	S	288	AGCCGAGGCATTCGGGTGGAGCTTCGTCTTTGAGGATTTTGTCTCCCCTG	5	+	130328783-130328832	5qG1.3	Mus musculus sulfatase modifying factor 2 (Sumf2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	2610040F05Rik	2610040F05Rik
Mus musculus	RefSeq	ILMN_186472	ILMN_246120	TMC4	NM_181820.2	NM_181820.2		353499	116063551	NM_181820.2	Tmc4	NP_861541.2	ILMN_2435822	004200451	S	1740	CATCTACTCACCGGCTTCCCGCACCTTCCGAGCATCCACGGCAAACTTCT	7	-	3618716-3618765	7qA1	Mus musculus transmembrane channel-like gene family 4 (Tmc4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_202807	ILMN_257292	CENPF	XM_916605.2	XM_916605.2		108000	94364690	XM_916605.2	Cenpf	XP_921698.1	ILMN_1234999	001580632	S	564	CCATGCAGTACACCACAGAAACTCTTTGCAACTCCACTCACACCGAGTTC				1qH6	PREDICTED: Mus musculus centromere autoantigen F, transcript variant 3 (Cenpf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_227720	ILMN_227720	AW548124	NM_134117.1	NM_134117.1		106522	56565554	NM_134117.1	AW548124	NP_598878.1	ILMN_3030824	001190286	I	325	GGGAGCTGGCCCGGCAGATCCGGGAGCGCTACGAGGAGGTGCAGCGCTAT	17	+	83614966-83615015	17qE4	Mus musculus expressed sequence AW548124 (AW548124), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI115348; X83346; MGC99930; ESTM17	AI115348; X83346; MGC99930; ESTM17
Mus musculus	RefSeq	ILMN_227720	ILMN_227720	AW548124	NM_134117.1	NM_134117.1		106522	56565554	NM_134117.1	AW548124	NP_598878.1	ILMN_3104118	006940315	A	2006	GAGCCAAGACTAGAGTGGAGGAGCAGATTGCATTTGAGCCAGGACTGGGG	17	+	83624123-83624172	17qE4	Mus musculus expressed sequence AW548124 (AW548124), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI115348; X83346; MGC99930; ESTM17	AI115348; X83346; MGC99930; ESTM17
Mus musculus	RefSeq	ILMN_219106	ILMN_227720	AW548124	NM_134117.1	NM_134117.1		106522	56565554	NM_134117.1	AW548124	NP_598878.1	ILMN_1233376	006620328	S	1980	GTGGGCAGCAGTGCTCGCATCCATATGAGCCAAGACTAGAGTGGAGGAGC	17	+	83624097-83624146	17qE4	Mus musculus expressed sequence AW548124 (AW548124), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI115348; X83346; MGC99930; ESTM17	AI115348; X83346; MGC99930; ESTM17
Mus musculus	RefSeq	ILMN_257734	ILMN_257734	RNASE13	NM_001011687.1	NM_001011687.1		497071	58743352	NM_001011687.1	Rnase13	NP_001011687.1	ILMN_2872207	002140112	S	144	CCACGGATACTGTAATGGCCTCATGGCCTACGTGAGAGGCAAACTGCAGG	14	-	52542162-52542211	14qC2	Mus musculus ribonuclease, RNase A family, 13 (non-active) (Rnase13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]		
Mus musculus	Riken	ILMN_206584	ILMN_206584	D930007M19RIK	ri|D930007M19|PX00200J14|AK086138|1776					AK086138	D930007M19Rik		ILMN_2581178	006960328	S	1082	TGTAGTGGGAGTGTCCAAGGTGTCTAAAGCCTTCACCCTTCTTGAGTTTC										
Mus musculus	RefSeq	ILMN_222120	ILMN_222120	GADD45G	NM_011817.1	NM_011817.1		23882	6753937	NM_011817.1	Gadd45g	NP_035947.1	ILMN_2903945	004070142	S	988	ACGGATCCCGGGCAATGCTTTCATTTTCTAAAGGACGCTATCGTGGAAGC	13	+	51943769-51943818	13qA5	Mus musculus growth arrest and DNA-damage-inducible 45 gamma (Gadd45g), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; The process whereby a relatively unspecialized T cell acquires the specialized features of a Th1 cell [goid 45063] [evidence TAS]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the formation of interferon-gamma [goid 42095] [evidence TAS]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DDIT2; C86281; OIG37; AI327420; CR6	DDIT2; C86281; OIG37; AI327420; CR6
Mus musculus	RefSeq	ILMN_222120	ILMN_222120	GADD45G	NM_011817.1	NM_011817.1		23882	6753937	NM_011817.1	Gadd45g	NP_035947.1	ILMN_2744890	006330377	S	510	TTTGTTCTGCGAGGAGAGCCGCAGCTTCAACGACTGGGTGCCCAGCATCA	13	+	51943291-51943340	13qA5	Mus musculus growth arrest and DNA-damage-inducible 45 gamma (Gadd45g), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; The process whereby a relatively unspecialized T cell acquires the specialized features of a Th1 cell [goid 45063] [evidence TAS]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the formation of interferon-gamma [goid 42095] [evidence TAS]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DDIT2; C86281; OIG37; AI327420; CR6	DDIT2; C86281; OIG37; AI327420; CR6
Mus musculus	MEEBO	ILMN_195992	ILMN_195992	9530097L16RIK	scl0319250.1_319						9530097L16Rik		ILMN_1242459	005490047	S	1	GCCACTCTCAGTGGCCAGACGTAAAAAAATAATCAGTTATTCCAAAGATA										
Mus musculus	RefSeq	ILMN_190138	ILMN_232643	UTY	NM_009484.2	NM_009484.2		22290	110665737	NM_009484.2	Uty	NP_033510.2	ILMN_2467512	006860451	S	4619	CCACAATTAATTTTTATATGTGTAAATAAAGCTACTTAGTATTGTACATA	Y	-	489503-489552	YqA1	Mus musculus ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome (Uty), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA4057; Hydb; mKIAA4057	KIAA4057; Hydb; mKIAA4057
Mus musculus	RefSeq	ILMN_232643	ILMN_232643	UTY	NM_009484.2	NM_009484.2		22290	110665737	NM_009484.2	Uty	NP_033510.2	ILMN_2907351	004590538	S	3556	GCAGCAGGGAAAGAGGTTTTGTGGCATGGGAGGATAAATGATGAACCAGC	Y	-	494656-494705	YqA1	Mus musculus ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome (Uty), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA4057; Hydb; mKIAA4057	KIAA4057; Hydb; mKIAA4057
Mus musculus	RefSeq	ILMN_212295	ILMN_212295	PLAA	NM_172695.2	NM_172695.2		18786	114431249	NM_172695.2	Plaa	NP_766283.2	ILMN_1221702	005860041	S	2575	GAATGCTGTAGACTTGTCTTACATTTGCTGTAGCAGTGGGGAAAAGACGC	4	-	94236020-94236037:94236038-94236069	4qC5	Mus musculus phospholipase A2, activating protein (Plaa), mRNA.		The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of the enzyme phospholipase A2 [goid 16005] [evidence IDA]	AU018445; PLAP; AI536418; AW208417; 2410007N06; D4Ertd618e	AU018445; PLAP; AI536418; AW208417; 2410007N06; D4Ertd618e
Mus musculus	RefSeq	ILMN_212295	ILMN_212295	PLAA	NM_172695.2	NM_172695.2		18786	114431249	NM_172695.2	Plaa	NP_766283.2	ILMN_2624842	006520537	S	1563	GGCTAAATTTATTATTGATAACACAAAAGGTCAAACACTGGGACTTGGGA	4	-	94249198-94249247	4qC5	Mus musculus phospholipase A2, activating protein (Plaa), mRNA.		The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of the enzyme phospholipase A2 [goid 16005] [evidence IDA]	AU018445; PLAP; AI536418; AW208417; 2410007N06; D4Ertd618e	AU018445; PLAP; AI536418; AW208417; 2410007N06; D4Ertd618e
Mus musculus	RefSeq	ILMN_195389	ILMN_248274	MFSD4	NM_172510.3	NM_172510.3		213006	146149202	NM_172510.3	Mfsd4	NP_766098.1	ILMN_2751471	002690575	S	3161	ACTGCTTATACCTACATTGGTGATGATTGATGTGTTAATATAGAAAACTC				1qE4	Mus musculus major facilitator superfamily domain containing 4 (Mfsd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	A930031D07Rik; AI850289; A230072B04	A930031D07Rik; AI850289; A230072B04
Mus musculus	RefSeq	ILMN_217784	ILMN_217784	1700040L02RIK	NM_028491.1	NM_028491.1		73287	28077018	NM_028491.1	1700040L02Rik	NP_082767.1	ILMN_2687560	003520681	S	1175	ATATACGAAAATACAATTACTATTAGGATGCTGTTTTGACTAATAAATAC	10	-	67893717-67893766	10qB5.2	Mus musculus RIKEN cDNA 1700040L02 gene (1700040L02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_224186	ILMN_240691	ANG2	NM_007449.2	NM_007449.2		11731	112818585	NM_007449.2	Ang2	NP_031475.2	ILMN_2776242	006420475	S	281	TAAGCAAGTCTCACTTCCAGGTCACCACTTGCACACACAAAGGAAGGTCT	14	-	51815268-51815317	14qC1	Mus musculus angiogenin, ribonuclease A family, member 2 (Ang2), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	Angrp; Rnase5b	Angrp; Rnase5b
Mus musculus	RefSeq	ILMN_198458	ILMN_198458	LOC240669	XM_140729.3	XM_140729.3			38085227	XM_140729.3	LOC240669		ILMN_1246384	001240112	S	51	CCGCGCGTCGCGGGGCCACCCCCAGAACCTCAAAGTTAGATTTCCTTTTC										
Mus musculus	RefSeq	ILMN_223369	ILMN_223369	CYP4F14	NM_022434.1	NM_022434.1		64385	11967964	NM_022434.1	Cyp4f14	NP_071879.1	ILMN_1231625	004640041	S	1894	GTGAGAGAGGCCTGCTCCATAAGGTGCATTCTCCTCCAACCAACCTGGAC	17	-	33042270-33042319	17qB1	Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 14 (Cyp4f14), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate + NADPH + H2O = (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-trihydroxyicosa-6,8,10,14-tetraenoate + NADP+ + H2O [goid 50051] [evidence IEA]	AW108534; 1300014O15Rik	AW108534; 1300014O15Rik
Mus musculus	MEEBO	ILMN_187167	ILMN_187167	ADAMTS10	scl50851.22.1_3				27369891	NM_172619	Adamts10		ILMN_2673134	007320088	S	1428	TCACTCAAGACTAAAGTAGACCCAATGAACAGATAATGCGGGTGGGTCAA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185081	ILMN_185081	ZMYND11	NM_144516.2	NM_144516.2		66505	89337271	NM_144516.2	Zmynd11	NP_653099.2	ILMN_2497068	006290619	S	2155	GAGCTGAATGTAAGAGCGGATGCTTCAGAACAGACTACCTGGCCGTGACC	13	-	9685723-9685772	13qA1	Mus musculus zinc finger, MYND domain containing 11 (Zmynd11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2210402G22Rik	2210402G22Rik
Mus musculus	RefSeq	ILMN_185081	ILMN_185081	ZMYND11	NM_144516.2	NM_144516.2		66505	89337271	NM_144516.2	Zmynd11	NP_653099.2	ILMN_2472861	006270452	S	2784	CAAAGTCCGTATTCTGCGGGGTGTCTGCTTAAGCAGCGTTACTGGTAGGA	13	-	9685094-9685143	13qA1	Mus musculus zinc finger, MYND domain containing 11 (Zmynd11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2210402G22Rik	2210402G22Rik
Mus musculus	RefSeq	ILMN_210342	ILMN_210342	PDX1	NM_008814.2	NM_008814.2		18609	31560657	NM_008814.2	Pdx1	NP_032840.1	ILMN_2604604	005900524	S	1653	GGAAGGCAGGTGCCCTGGTACACCTTGGAAAACTAGTCACAACGCCCTGA	5	+	148087086-148087135	5qG3	Mus musculus pancreatic and duodenal homeobox 1 (Pdx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whose specific outcome is the progression of the exocrine pancreas over time, from its formation to the mature structure. The exocrine pancreas produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells [goid 31017] [evidence IMP]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	IDX-1; Mody4; IPF-1; pdx-1; STF-1; Ipf1	IDX-1; Mody4; IPF-1; pdx-1; STF-1; Ipf1
Mus musculus	MEEBO	ILMN_208827	ILMN_208827	EML5	scl0217820.1_102	NM_178409.2			31341531	NM_178409.2	Eml5		ILMN_1219936	005270121	S	3564	AGCTAATTCTGTTATCTTTCAATGGAAAGGCAATGACCACAGTAGAAGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_213704	ILMN_213704	POLR3K	NM_025901.3	NM_025901.3		67005	134053866	NM_025901.3	Polr3k	NP_080177.1	ILMN_1215772	000940753	S	1886	CATGCTTCTGCCTGCGTCAATCTCAGTTCGTTCAGTAAACTTTTCTCAGC	2	+	181604496-181604545	2qH4	Mus musculus polymerase (RNA) III (DNA directed) polypeptide K (Polr3k), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C11; 1500004O14Rik; RPC10; 12.3kDa; RPC11; AI196849; AU014893	C11; 1500004O14Rik; RPC10; 12.3kDa; RPC11; AI196849; AU014893
Mus musculus	RefSeq	ILMN_213704	ILMN_213704	POLR3K	NM_025901.3	NM_025901.3		67005	134053866	NM_025901.3	Polr3k	NP_080177.1	ILMN_2639861	003290048	S	1082	TTAATAACTAAACAAAACTATTCTGTGAGTTGGACTTTCTGGATGATTTT	2	+	181603692-181603741	2qH4	Mus musculus polymerase (RNA) III (DNA directed) polypeptide K (Polr3k), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	C11; 1500004O14Rik; RPC10; 12.3kDa; RPC11; AI196849; AU014893	C11; 1500004O14Rik; RPC10; 12.3kDa; RPC11; AI196849; AU014893
Mus musculus	Riken	ILMN_204550	ILMN_204550	B930008G03RIK	ri|B930008G03|PX00162F03|AK046967|1275					AK046967	B930008G03Rik		ILMN_2565835	005360576	S	1042	CGGCCATCATTGGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATGCCCC										
Mus musculus	RefSeq	ILMN_218694	ILMN_218694	EG269902	NM_177764.3	NM_177764.3		269902	142369995	NM_177764.3	EG269902	NP_808432.1	ILMN_1222229	001030360	S	3771	GCTGATGTTGAAGATATGTAACCATCCCCAGCCATTTTATATTCATTTGG	7	-	48654774-48654823	7qB3	Mus musculus predicted gene, EG269902 (EG269902), mRNA.				D430014M15	D430014M15
Mus musculus	RefSeq	ILMN_234898	ILMN_234898	HSPB6	NM_001012401.1	NM_001012401.1		243912	59958369	NM_001012401.1	Hspb6	NP_001012401.1	ILMN_2805339	004040386	S	1246	AGGTCACACCTTCACTGCCAACATTTCCCATCTCCGCAGGCCTTCCTACC	7	+	30264120-30264169	7qB1	Mus musculus heat shock protein, alpha-crystallin-related, B6 (Hspb6), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]		Gm479; AA387366; Hsp20; MGC107687	Gm479; AA387366; Hsp20; MGC107687
Mus musculus	RefSeq	ILMN_216096	ILMN_216096	CASC3	NM_138660.1	NM_138660.1		192160	20149743	NM_138660.1	Casc3	NP_619601.1	ILMN_2999007	004730332	S	3703	CTTCCAGGGGTAGCTGGTGGGTGTGCTTTTCATAGGCTTCCCTTTGCCTT	11	+	98694868-98694917	11qD	Mus musculus cancer susceptibility candidate 3 (Casc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]	Any process by which mRNA is transported to, or maintained in, a specific location within the cell [goid 8298] [evidence IDA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISO]	Mln51; Btz	Mln51; Btz
Mus musculus	MEEBO	ILMN_216442	ILMN_216442	ELA3B	scl0067868.1_42	NM_026419.1			13385915	NM_026419.1	Ela3b		ILMN_2671137	002360687	S	341	TGTGCACCCCAAGTGGAACTCTATGTGTGTGAGCTGTGGCAATGACATCG										
Mus musculus	RefSeq	ILMN_223749	ILMN_223749	ABCB1A	NM_011076.2	NM_011076.2		18671	153791546	NM_011076.2	Abcb1a	NP_035206.2	ILMN_2768563	007560739	S	4263	ACTGATTTCTGCTTAACAAATTATGTATGTATCAAAAATTACTGAAATGT				5qA1	Mus musculus ATP-binding cassette, sub-family B (MDR/TAP), member 1A (Abcb1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates [goid 46581] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a drug, a substance used in the diagnosis, treatment or prevention of a disease, into, out of, within or between cells [goid 15893] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out) [goid 8559] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive some other reaction, for example ion transport across a membrane [goid 42623] [evidence IDA]	Mdr1a; MDR3; Pgp; Evi32; Abcb4; Pgy-3; P-gp; mdr-3; Pgy3	Mdr1a; MDR3; Pgp; Evi32; Abcb4; Pgy-3; P-gp; mdr-3; Pgy3
Mus musculus	RefSeq	ILMN_215393	ILMN_215393	ITGB2	NM_008404.4	NM_008404.4		16414	145966904	NM_008404.4	Itgb2	NP_032430.2	ILMN_1242661	004560601	S	2146	GCAGCAGAAGGACGGAAGGAACATTTACAACATCCATGTGGAGGACAGTC				10qC1	Mus musculus integrin beta 2 (Itgb2), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]; The migration of leukocytes from the blood vessels into the surrounding tissue [goid 45123] [evidence IMP]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Cd18; AI528527; 2E6; MF17; Lfa1; LCAMB; LAD	Cd18; AI528527; 2E6; MF17; Lfa1; LCAMB; LAD
Mus musculus	RefSeq	ILMN_199951	ILMN_199951	LOC381593	XM_355550.1	XM_355550.1			38079175	XM_355550.1	LOC381593		ILMN_2537064	005810609	S	44	AATGGTGCAGGGAGTCTAAGGCCAGAATCCATTTAGCCCCAGCCGCATGC										
Mus musculus	RefSeq	ILMN_198940	ILMN_198940	LOC244893	XM_146987.3	XM_146987.3			38089926	XM_146987.3	LOC244893		ILMN_2533466	001260392	S	1905	AAATAGCAGTGGTGCTGCCCGAGGCCACATGGGCAGGTCATACAGTGGCT										
Mus musculus	RefSeq	ILMN_224091	ILMN_232528	LAMC1	NM_010683.2	NM_010683.2		226519	153791269	NM_010683.2	Lamc1	NP_034813.2	ILMN_2774596	004900110	S	7505	TCTCTACAGCCTTCCCCCCTCAGGGAGGGCAATAAAGCGCAACACTTGGC				1qG3	Mus musculus laminin, gamma 1 (Lamc1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A laminin complex composed of alpha5, beta1 and gamma1 polypeptide chains [goid 43259] [evidence IPI]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Lamb2	Lamb2
Mus musculus	RefSeq	ILMN_223266	ILMN_223266	FETUB	NM_021564.2	NM_021564.2		59083	144226246	NM_021564.2	Fetub	NP_067539.1	ILMN_2761645	004540725	S	1242	GGAGGGAGCCCTGAGGAAGCCTTTCCTGTGCAGCTGGATCTAACCACCAA	16	+	22939508-22939557	16qB1	Mus musculus fetuin beta (Fetub), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [evidence IEA]	Gugu; D17980; AI255764; 2310011O17Rik	Gugu; D17980; AI255764; 2310011O17Rik
Mus musculus	RefSeq	ILMN_223313	ILMN_223313	LANCL3	NM_173414.2	NM_173414.2		236285	142373066	NM_173414.2	Lancl3	NP_775590.1	ILMN_1221225	000780519	S	3735	AGGTCACTCTTTGTATATCATATCTAAAAAATGGTCATGTTTGGGTGTGG	X	+	8845026-8845075	XqA1.1	Mus musculus LanC lantibiotic synthetase component C-like 3 (bacterial) (Lancl3), mRNA.				6030463G20Rik	6030463G20Rik
Mus musculus	RefSeq	ILMN_190341	ILMN_241001	STARD4	NM_133774.4	NM_133774.4		170459	146149118	NM_133774.4	Stard4	NP_598535.1	ILMN_1240445	004210288	S	2723	CACTGCTGAGCAGGGACGCACTGCAAGTAAAACAACCCTCGTGGAAATGT				18qB1	Mus musculus StAR-related lipid transfer (START) domain containing 4 (Stard4), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence ISA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]	9030213J02Rik; AW324468; 4632419C16Rik; AA517649	9030213J02Rik; AW324468; 4632419C16Rik; AA517649
Mus musculus	RefSeq	ILMN_216062	ILMN_216062	QPCTL	NM_026111.3	NM_026111.3		67369	118129858	NM_026111.3	Qpctl	NP_080387.2	ILMN_1222697	000780465	S	1310	CTGAGGCACGAAAGAGCCAAAGGAAATAAGGAATCCTTTGGCTTCTGTCC	7	-	19726306-19726355	7qA3	Mus musculus glutaminyl-peptide cyclotransferase-like (Qpctl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	1810019P04Rik; BB101812	1810019P04Rik; BB101812
Mus musculus	MEEBO	ILMN_220303	ILMN_220303	ARHGEF11	scl0213498.14_294	XM_159702.3			38077560	XM_159702.3	Arhgef11		ILMN_2720356	006370598	S	5389	CTCATCACCCTGTCCTCACGCCACTCCCTACAATGAACATACACACTGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISO]	Interacting selectively with a G-protein-coupled receptor [goid 1664] [evidence ISO]		
Mus musculus	RefSeq	ILMN_214420	ILMN_214420	APOC2	NM_009695.2	NM_009695.2		11813	31981900	NM_009695.2	Apoc2	NP_033825.1	ILMN_2647820	006980113	S	155	GGGGGCCCTCCAGAGCTATAAAGCCTGCCAACCCACTGGAGTACTGGAGT	7	-	20262105-20262154	7qA3	Mus musculus apolipoprotein C-II (Apoc2), mRNA.	A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Increases the activity of an enzyme [goid 8047] [evidence IEA]	MGC117889	MGC117889
Mus musculus	RefSeq	ILMN_214420	ILMN_214420	APOC2	NM_009695.2	NM_009695.2		11813	31981900	NM_009695.2	Apoc2	NP_033825.1	ILMN_2880540	005390240	S	295	TGTTGGGAAATGAGGTCCAGGGGAACCAGGAAGATGACTCGGGCAGCCTG	7	-	20258690-20258728:20258896-20258906	7qA3	Mus musculus apolipoprotein C-II (Apoc2), mRNA.	A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Increases the activity of an enzyme [goid 8047] [evidence IEA]	MGC117889	MGC117889
Mus musculus	RefSeq	ILMN_197259	ILMN_197259	LOC381376	XM_355341.1	XM_355341.1			38074827	XM_355341.1	LOC381376		ILMN_2527494	006840041	S	1486	GCTCAAGCCCAAAACTCTAGTGGCACCCTGTCTTCCAAAGCCATCCTCCA										
Mus musculus	RefSeq	ILMN_200530	ILMN_200530	LOC384338	XM_357585.1	XM_357585.1			38083355	XM_357585.1	LOC384338		ILMN_1239834	000780520	S	333	GCTGGACAAGATCCCGGGCATGCAGAAGCTGAGCACACCCCAGAAGAAGT										
Mus musculus	RefSeq	ILMN_220071	ILMN_220071	AMOT	NM_153319.2	NM_153319.2		27494	125346195	NM_153319.2	Amot	NP_695231.2	ILMN_2729617	007560072	S	2621	AATCCAGGTGCCAGTTCCGGACCACGCCGCTTGTCTACACCAAATCTGAT	X	-	141884993-141885042	XqF2	Mus musculus angiomotin (Amot), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISO]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISO]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of embryonic development [goid 40019] [evidence IMP]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence ISO]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISO]	D0Kist1; E230009N18Rik; C81439; CAG-2; mKIAA1071	D0Kist1; E230009N18Rik; C81439; CAG-2; mKIAA1071
Mus musculus	RefSeq	ILMN_220071	ILMN_220071	AMOT	NM_153319.2	NM_153319.2		27494	125346195	NM_153319.2	Amot	NP_695231.2	ILMN_2717242	002320162	S	2615	CCTGCAAATCCAGGTGCCAGTTCCGGACCACGCCGCTTGTCTACACCAAA	X	-	141884999-141885048	XqF2	Mus musculus angiomotin (Amot), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISO]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISO]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of embryonic development [goid 40019] [evidence IMP]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence ISO]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISO]	D0Kist1; E230009N18Rik; C81439; CAG-2; mKIAA1071	D0Kist1; E230009N18Rik; C81439; CAG-2; mKIAA1071
Mus musculus	MEEBO	ILMN_187568	ILMN_187568	E130106K10RIK	scl17094.4_151				51705470	XM_136506	E130106K10Rik		ILMN_2445236	000010035	S	19	AGACAGGGAGTGCTCTCAAAACATTAGAGGGGGTACGCTTTGCTGAGGTG										
Mus musculus	MEEBO	ILMN_188409	ILMN_188409	MTF2	scl27470.22_46				7305288	NM_013827	Mtf2		ILMN_2703913	000630615	S	1390	GTTTTGGCTCGTCGGGTGAGCCTTGATGGGAAGGTGCAGTATCTTGTGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223571	ILMN_223571	5730472N09RIK	NM_175392.3	NM_175392.3		108958	31982182	NM_175392.3	5730472N09Rik	NP_780601.1	ILMN_2765936	001170537	S	3325	GGAGCAGCCCTCATGCACTGTCTTGACATTCCATTCATTTGCACTTACCC	2	+	30240817-30240866	2qB	Mus musculus RIKEN cDNA 5730472N09 gene (5730472N09Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			R74766; RP23-395P6.6; C9orf54; AI790341; AA408683	R74766; RP23-395P6.6; C9orf54; AI790341; AA408683
Mus musculus	RefSeq	ILMN_241592	ILMN_241592	SPIN2	NM_001005370.1	NM_001005370.1		278240	52851392	NM_001005370.1	Spin2	NP_001005370.1	ILMN_2934522	002320093	S	815	TCATGCCAGAGTCCAGTGCATCTCCTCCAGCAGACAGGGAGCCAGAAGGA	X	+	150268292-150268341	XqF3	Mus musculus spindlin family, member 2 (Spin2), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]		BC068162; MGC93001	BC068162; MGC93001
Mus musculus	RefSeq	ILMN_241592	ILMN_241592	SPIN2	NM_001005370.1	NM_001005370.1		278240	52851392	NM_001005370.1	Spin2	NP_001005370.1	ILMN_2934527	004040167	S	374	GCAGATCTTCATCCCGTAGGAGCATCGTGGGCTGTAGAATTTCTCACGGG	X	+	150267851-150267900	XqF3	Mus musculus spindlin family, member 2 (Spin2), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]		BC068162; MGC93001	BC068162; MGC93001
Mus musculus	RefSeq	ILMN_219291	ILMN_253931	SCAMP1	NM_029153.1	NM_029153.1		107767	58037394	NM_029153.1	Scamp1	NP_083429.1	ILMN_2706853	000160240	S	3464	GTCACGGTTCTGTGTAAACGCCCTCCATGTGGCCCTCTCATGTTGCATGT	13	-	94971462-94971511	13qD1	Mus musculus secretory carrier membrane protein 1 (Scamp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence TAS]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; The lipid bilayer surrounding a zymogen granule [goid 42589] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IMP]		AW122395; AI415563; 4930505M11Rik	AW122395; AI415563; 4930505M11Rik
Mus musculus	RefSeq	ILMN_221052	ILMN_221052	ELAC2	NM_023479.1	NM_023479.1		68626	12963694	NM_023479.1	Elac2	NP_075968.1	ILMN_1212672	004830592	S	2638	TGACTGCCCCGCAGCCTTCACCGAAACAAGACCATGTGCCAAGCTCAGGG	11	+	64815497-64815546	11qB3	Mus musculus elaC homolog 2 (E. coli) (Elac2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1110017O07Rik; D11Wsu80e; Hpc2	1110017O07Rik; D11Wsu80e; Hpc2
Mus musculus	RefSeq	ILMN_221052	ILMN_221052	ELAC2	NM_023479.1	NM_023479.1		68626	12963694	NM_023479.1	Elac2	NP_075968.1	ILMN_2859678	000730274	S	2266	GAGACTTCCCGACAGTGCCCAAGCTGATTCCCCCACTGAAGGCCCTGTTT	11	+	64814507-64814556	11qB3	Mus musculus elaC homolog 2 (E. coli) (Elac2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1110017O07Rik; D11Wsu80e; Hpc2	1110017O07Rik; D11Wsu80e; Hpc2
Mus musculus	RefSeq	ILMN_221052	ILMN_221052	ELAC2	NM_023479.1	NM_023479.1		68626	12963694	NM_023479.1	Elac2	NP_075968.1	ILMN_1255921	000730544	S	583	AGAGCCCCAGAACATCTCCCAACAGGCTCAGTCCCAAACAGTCATCGGAC	11	+	64797129-64797178	11qB3	Mus musculus elaC homolog 2 (E. coli) (Elac2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1110017O07Rik; D11Wsu80e; Hpc2	1110017O07Rik; D11Wsu80e; Hpc2
Mus musculus	RefSeq	ILMN_227877	ILMN_227877	DOCK9	NM_001081039.1	NM_001081039.1		105445	124486663	NM_001081039.1	Dock9	NP_001074508.1	ILMN_3120306	003440731	A	5509	ACTTCCGGGTGGCCTTCTTTGGACAGGGGTTCTTCGAAGACGAAGATGGG	14	-	121958331-121958355:121959812-121959836	14qE5	Mus musculus dedicator of cytokinesis 9 (Dock9), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]	AW538057; mKIAA1058; Zizimin1; B230309H04Rik; AA959601; D14Wsu89e	AW538057; mKIAA1058; Zizimin1; B230309H04Rik; AA959601; D14Wsu89e
Mus musculus	RefSeq	ILMN_222810	ILMN_227877	DOCK9	NM_001081039.1	NM_001081039.1		105445	124486663	NM_001081039.1	Dock9	NP_001074508.1	ILMN_2755167	007040768	S	5130	CAGCGGGAACCACCTGCCTTCCCCTACAGCCATAGCACCTGCCAGAGGAA	14	-	121976579-121976628	14qE5	Mus musculus dedicator of cytokinesis 9 (Dock9), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]	AW538057; mKIAA1058; Zizimin1; B230309H04Rik; AA959601; D14Wsu89e	AW538057; mKIAA1058; Zizimin1; B230309H04Rik; AA959601; D14Wsu89e
Mus musculus	RefSeq	ILMN_214105	ILMN_227877	DOCK9	NM_001081039.1	NM_001081039.1		105445	124486663	NM_001081039.1	Dock9	NP_001074508.1	ILMN_2766349	001030762	S	613	GCGGGATCACCAAGCATGGCTGGCTGTACAAAGGCAACATGAACAGCGCC	14	-	122057949-122057998	14qE5	Mus musculus dedicator of cytokinesis 9 (Dock9), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]	AW538057; mKIAA1058; Zizimin1; B230309H04Rik; AA959601; D14Wsu89e	AW538057; mKIAA1058; Zizimin1; B230309H04Rik; AA959601; D14Wsu89e
Mus musculus	RefSeq	ILMN_214105	ILMN_227877	DOCK9	NM_001081039.1	NM_001081039.1		105445	124486663	NM_001081039.1	Dock9	NP_001074508.1	ILMN_2644315	006370221	S	7583	GAACTAAGTGATTGGTAAACCCTAAGCCCTGTATGAGTGGAGGGATAGTT	14	-	121941538-121941587	14qE5	Mus musculus dedicator of cytokinesis 9 (Dock9), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]	AW538057; mKIAA1058; Zizimin1; B230309H04Rik; AA959601; D14Wsu89e	AW538057; mKIAA1058; Zizimin1; B230309H04Rik; AA959601; D14Wsu89e
Mus musculus	RefSeq	ILMN_185060	ILMN_185060	ZFPL1	NM_024231.2	NM_024231.2		81909	118130277	NM_024231.2	Zfpl1	NP_077193.1	ILMN_1217262	004220451	S	944	CTCACATCCGTGTAGGTCCTTCCTGAGCCCTTGCTTGTGTTTGGGCCAGC	19	-	6081003-6081027:6081028-6081052	19qA	Mus musculus zinc finger like protein 1 (Zfpl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1500015B20Rik	1500015B20Rik
Mus musculus	RefSeq	ILMN_200910	ILMN_200910	LOC382255	XM_358722.1	XM_358722.1			38086971	XM_358722.1	LOC382255		ILMN_1231549	001070433	S	509	TCAGCAGATCAAGAAACTAGAGCCTCAGGATGGAGAGAAGACTACACCCG										
Mus musculus	RefSeq	ILMN_210842	ILMN_210842	CCDC82	NM_025534.2	NM_025534.2		66396	61098117	NM_025534.2	Ccdc82	NP_079810.2	ILMN_2609772	002340008	S	796	CAGGAGCTTTCTGAGAGATCACGCCAGAGACGGAGGCGCAATAGTGGTAG	9|NT_166314.1	+	84122-84171		Mus musculus coiled-coil domain containing 82 (Ccdc82), mRNA.				FLJ23518; 2310043N13Rik; MGC107477	FLJ23518; 2310043N13Rik; MGC107477
Mus musculus	MEEBO	ILMN_222568	ILMN_222568	PHXR4	scl37287.1.1_235	NM_008835.1			6679308	NM_008835.1	Phxr4		ILMN_2751603	000520286	S	1249	GCGTCAGCTTGTGTTCTGGTGAGCAATGAAGTGTCAGGCCAGTGGAATCC										
Mus musculus	RefSeq	ILMN_212904	ILMN_212904	EXOSC3	NM_025513.3	NM_025513.3		66362	146149071	NM_025513.3	Exosc3	NP_079789.1	ILMN_1246799	004290730	S	808	CAGATCTTTGCCAGACTGGCAGAGAGTTGACATATAAATTTTCTTAATGG				4qB1	Mus musculus exosome component 3 (Exosc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	2310005D06Rik; AI593501; Rrp40	2310005D06Rik; AI593501; Rrp40
Mus musculus	RefSeq	ILMN_209940	ILMN_209940	NOC4L	NM_153570.2	NM_153570.2		100608	31981993	NM_153570.2	Noc4l	NP_705798.2	ILMN_2600627	003180403	S	1509	AGTCAGTGCCCCTGGAGTTCATCCCCGCTAAAGGCCTATTGGGTCGACAG	5	-	111077918-111077967	5qF	Mus musculus nucleolar complex associated 4 homolog (S. cerevisiae) (Noc4l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			AI326906; MGC28606	AI326906; MGC28606
Mus musculus	RefSeq	ILMN_209940	ILMN_209940	NOC4L	NM_153570.2	NM_153570.2		100608	31981993	NM_153570.2	Noc4l	NP_705798.2	ILMN_2957862	000430142	S	1724	GCATGGATGTCTGTTTATCACATGTAGGCCAGGTGAGGGTGTCAGATCCC	5	-	111077703-111077752	5qF	Mus musculus nucleolar complex associated 4 homolog (S. cerevisiae) (Noc4l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			AI326906; MGC28606	AI326906; MGC28606
Mus musculus	RefSeq	ILMN_242920	ILMN_242920	TAF4A	NM_001081092.1	NM_001081092.1		228980	124487353	NM_001081092.1	Taf4a	NP_001074561.1	ILMN_3014419	005570402	I	1178	GCCTGCCGCAGCCGCCGCAGAACCCGACCAACATCCAGAACTTCCAGCTG	2	-	179710124-179710173	2qH4	Mus musculus TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf4a), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISO]	The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence TAS]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [evidence TAS]	Taf2c1; TAFII135; AI450312; TAFII130; 135kDa	Taf2c1; TAFII135; AI450312; TAFII130; 135kDa
Mus musculus	MEEBO	ILMN_218722	ILMN_218722	FLOT1	scl50763.13.1_199	NM_008027.1			6679808	NM_008027.1	Flot1		ILMN_2702464	002630626	S	298	CCCTCAATGTCAAGAGTGAAAAGGTTTATACCCGCCACGGGGTCCCCATC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A heteromeric complex of flotillin 1, flotillin 2, caveolin 1 and caveolin 2 within the caveolar membrane [goid 16600] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_211028	ILMN_211028	FBXL5	NM_178729.2	NM_178729.2		242960	31341296	NM_178729.2	Fbxl5	NP_848844.1	ILMN_2797374	003460044	S	3835	GCTGCATCACTGAAAAGCCCTCTATGAGTCATAAAAGCTGTACCCAGCTC	5	-	44044480-44044529	5qB3	Mus musculus F-box and leucine-rich repeat protein 5 (Fbxl5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fir4; Fbl4	Fir4; Fbl4
Mus musculus	RefSeq	ILMN_210030	ILMN_313490	LOC100045002	XR_031252.1	XR_031252.1		100045002	149265211	XR_031252.1	LOC100045002		ILMN_2742209	003440239	S	1262	GTGAGGAGGGTGAAGGCGATGACAGAGAAGAGTCTGTTGAGAAACTGGAC					PREDICTED: Mus musculus similar to ataxin-7 (LOC100045002), misc RNA.					
Mus musculus	Riken	ILMN_205176	ILMN_205176	C230084K08RIK	ri|C230084K08|PX00177C23|AK048942|2406					AK048942	C230084K08Rik		ILMN_1250226	004280324	S	1945	GCAGTAGTTTTGTAGGAAGATGGAAAATAGTTGTATGGAGCAGGCTGCAG										
Mus musculus	MEEBO	ILMN_212376	ILMN_212376	B130006D01RIK	scl41004.1.2_10	NM_177209.2			31343072	NM_177209.2	B130006D01Rik		ILMN_2625736	005490093	S	2801	GTCAGGTTATCTTGGCATCAGTCACTTGGGGATTTAATACCATAAAACGT										
Mus musculus	RefSeq	ILMN_209967	ILMN_209967	4631427C17RIK	NM_021414.3	NM_021414.3		74340	51592083	NM_021414.3	4631427C17Rik	NP_067389.3	ILMN_2828420	005260612	S	4487	AGAAGACTGGTTGTCTCTGGTTATGTGGCCCTGGGCAGAGGGAAATACAC	6	+	29861696-29861745	6qA3.3	Mus musculus RIKEN cDNA 4631427C17 gene (4631427C17Rik), mRNA.				AI227036; KIAA0828; mKIAA0828	AI227036; KIAA0828; mKIAA0828
Mus musculus	RefSeq	ILMN_198312	ILMN_198312	LOC271501	XM_195063.2	XM_195063.2			38083804	XM_195063.2	LOC271501		ILMN_1224482	001230431	S	587	GCAAACTGAACAGTGCTACCCACAAGCAGCCGCTTTTCAGAAAGCTCCAG										
Mus musculus	RefSeq	ILMN_223114	ILMN_223114	D10JHU81E	NM_138601.1	NM_138601.1		28295	20070419	NM_138601.1	D10Jhu81e	NP_613067.1	ILMN_2991545	005340129	S	1077	CGGGCTTGCCTCACTGCGTGTCCCCATGGAAGATCTAAGCACCTTTCCCA	10	-	77565432-77565481	10qC1	Mus musculus DNA segment, Chr 10, Johns Hopkins University 81 expressed (D10Jhu81e), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			C21orf33; ES1	C21orf33; ES1
Mus musculus	RefSeq	ILMN_186112	ILMN_238023	ATRNL1	NM_181415.3	NM_181415.3		226255	56699441	NM_181415.3	Atrnl1	NP_852080.2	ILMN_1217254	000070356	S	6318	AATGAAAGAGTTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCA	19	+	58207576-58207625	19qD2	Mus musculus attractin like 1 (Atrnl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IPI]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Alp; AW555641; Atrnlp; AI504415; Atrnl	Alp; AW555641; Atrnlp; AI504415; Atrnl
Mus musculus	RefSeq	ILMN_197189	ILMN_316079	LOC100040159	XM_001474305.1	XM_001474305.1		100040159	149264228	XM_001474305.1	LOC100040159	XP_001474355.1	ILMN_1217620	000360228	S	405	CTCTGAATCAGTTGTGGCTACTGTCCATGAGCTCAGAAGCTCTTCCTTGG	13	-	50260840-50260889	13qA5	PREDICTED: Mus musculus hypothetical protein LOC100040159 (LOC100040159), mRNA.					
Mus musculus	Riken	ILMN_202247	ILMN_202247	4930440M09RIK	ri|4930440M09|PX00031P11|AK015350|1005					AK015350	4930440M09Rik		ILMN_1231945	003450747	S	704	GATGAAGCATTTCTGGCATGAGCGAGGTTCCGCATCCATTACCAACAGGG										
Mus musculus	RefSeq	ILMN_221163	ILMN_221163	MYO1F	NM_053214.1	NM_053214.1		17916	33859762	NM_053214.1	Myo1f	NP_444444.1	ILMN_2731760	004860719	S	3719	GGGAGCAAAGTGCTGTGCACTGCCCAGAGTTAGGAGACGTGGACAGTTAG	17	+	33744607-33744656	17qB1	Mus musculus myosin IF (Myo1f), mRNA.	The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IMP]; Any process that modulates the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection [goid 45088] [evidence IMP]; The regulated exocytosis of secretory granules containing preformed mediators such as proteases, lipases, and inflammatory mediators by a neutrophil [goid 43312] [evidence IMP]; Any process involved in the carrying out of an immune response by a neutrophil [goid 2446] [evidence IMP]; Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 32956] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	C330006B10Rik	C330006B10Rik
Mus musculus	RefSeq	ILMN_224053	ILMN_254064	5730469M10RIK	NM_027464.3	NM_027464.3		70564	146141200	NM_027464.3	5730469M10Rik	NP_081740.2	ILMN_1221501	004280681	S	1436	CAAAGTGAAGGTTCTGTGGTCTTCCCTTATAGACGCAGAGATTTGCTTCC				14qB	Mus musculus RIKEN cDNA 5730469M10 gene (5730469M10Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AU040822	AU040822
Mus musculus	RefSeq	ILMN_217531	ILMN_235216	LOC626347	XM_988229.1	XM_988229.1		626347	94377678	XM_988229.1	LOC626347	XP_993323.1	ILMN_2690611	000110523	S	116	CCACCATCTCCTGCAAGGCCAGCCAAAGTGTTGATTATGATGGTGATAGT				6qC1	PREDICTED: Mus musculus similar to Ig kappa chain V-III region MOPC 63 precursor (LOC626347), mRNA.					
Mus musculus	RefSeq	ILMN_212146	ILMN_212146	MUC10	NM_008644.1	NM_008644.1		17830	6678961	NM_008644.1	Muc10	NP_032670.1	ILMN_2623234	001030561	S	307	AGATGTGCCCTCCAGGAACTACCTTAATGCTGATCAGTCGCCGTTCTCCT	5	+	88756983-88757032	5qE1	Mus musculus mucin 10, submandibular gland salivary mucin (Muc10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_212146	ILMN_212146	MUC10	NM_008644.1	NM_008644.1		17830	6678961	NM_008644.1	Muc10	NP_032670.1	ILMN_1247393	005890095	S	305	AAGATGTGCCCTCCAGGAACTACCTTAATGCTGATCAGTCGCCGTTCTCC	5	+	88756981-88757030	5qE1	Mus musculus mucin 10, submandibular gland salivary mucin (Muc10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_206040	ILMN_206040	D030055F01RIK	ri|D030055F01|PX00181M15|AK051018|3014					AK051018	D030055F01Rik		ILMN_1248514	001580347	S	2542	GGGCCCAGTGCTCCAGAGGTAGAGGCAGGAGAATCAGAGGTTCAAAGTTA										
Mus musculus	MEEBO	ILMN_224040	ILMN_224040	NPY5R	scl34746.2_217				7710071	NM_016708	Npy5r		ILMN_2773600	002850224	S	1754	CCGTCCATTTCATGTCATTGGTAATAAGTTGAGTGTCTTCGGTTTCGAGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IDA]; Combining with pancreatic polypeptide PP to initiate a change in cell activity [goid 1602] [evidence IDA]; Combining with gut peptide YY to initiate a change in cell activity [goid 1601] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212179	ILMN_212179	OAS1G	NM_011852.2	NM_011852.2		23960	31560523	NM_011852.2	Oas1g	NP_035982.2	ILMN_2628822	000130598	S	450	CGCCCCCCATCTGCATCAGGAGGTGGAGTTTGATGTGCTTCCAGCCTTTG	5	-	121335790-121335839	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1G (Oas1g), mRNA.				Oas1a; Oias1; L2; AI449562; Oias-1; Mmu-L; Mmu-L2	Oas1a; Oias1; L2; AI449562; Oias-1; Mmu-L; Mmu-L2
Mus musculus	RefSeq	ILMN_212179	ILMN_212179	OAS1G	NM_011852.2	NM_011852.2		23960	31560523	NM_011852.2	Oas1g	NP_035982.2	ILMN_2624469	001580047	S	1935	GGTTTCCTTTCTGAGACATGAATTTGATGTGACACACGCTGTCGTGGAAC	5	-	121326159-121326208	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1G (Oas1g), mRNA.				Oas1a; Oias1; L2; AI449562; Oias-1; Mmu-L; Mmu-L2	Oas1a; Oias1; L2; AI449562; Oias-1; Mmu-L; Mmu-L2
Mus musculus	RefSeq	ILMN_212179	ILMN_212179	OAS1G	NM_011852.2	NM_011852.2		23960	31560523	NM_011852.2	Oas1g	NP_035982.2	ILMN_1253808	003890328	S	995	GGTTGGCTGAAGAGGCTGATGTGTGGCTGTGGTACCCATGTTTTATGAAA	5	-	121328365-121328414	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1G (Oas1g), mRNA.				Oas1a; Oias1; L2; AI449562; Oias-1; Mmu-L; Mmu-L2	Oas1a; Oias1; L2; AI449562; Oias-1; Mmu-L; Mmu-L2
Mus musculus	RefSeq	ILMN_212179	ILMN_212179	OAS1G	NM_011852.2	NM_011852.2		23960	31560523	NM_011852.2	Oas1g	NP_035982.2	ILMN_2816196	003890551	S	1638	TACACATACACACAAGAGAGGAACCCTTGGTTTCTTCTGCCCATGACCCC	5	-	121326456-121326505	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1G (Oas1g), mRNA.				Oas1a; Oias1; L2; AI449562; Oias-1; Mmu-L; Mmu-L2	Oas1a; Oias1; L2; AI449562; Oias-1; Mmu-L; Mmu-L2
Mus musculus	RefSeq	ILMN_222125	ILMN_212179	OAS1G	NM_011852.2	NM_011852.2		23960	31560523	NM_011852.2	Oas1g	NP_035982.2	ILMN_1255890	000870221	S	1546	ACATGATTCAGATGTTCAGCAGTGGTTAGAGCAAAGCCTAACTGCTAGGC	5	-	121326548-121326597	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1G (Oas1g), mRNA.				Oas1a; Oias1; L2; AI449562; Oias-1; Mmu-L; Mmu-L2	Oas1a; Oias1; L2; AI449562; Oias-1; Mmu-L; Mmu-L2
Mus musculus	RefSeq	ILMN_213335	ILMN_261008	IGHG	XM_985244.1	XM_985244.1		380794	94394436	XM_985244.1	Ighg	XP_990338.1	ILMN_1222531	006660156	S	287	GTGGCAGTAGTACCATCTACTATGCAGACACAGTGAAGGGCCGATTCACC					PREDICTED: Mus musculus Immunoglobulin heavy chain (gamma polypeptide) (Ighg), mRNA.			Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184896	ILMN_237037	CNPY1	NM_175651.4	NM_175651.4		269637	146198765	NM_175651.4	Cnpy1	NP_783582.1	ILMN_1257918	002900048	S	2121	GATGGATACAGCAGCTGATATGTAAATCAGAAACTGGGGCAAACTAGTGT				5qB1	Mus musculus canopy 1 homolog (zebrafish) (Cnpy1), mRNA.				9630008K15Rik	9630008K15Rik
Mus musculus	Riken	ILMN_205676	ILMN_205676	C230091E20RIK	ri|C230091E20|PX00177I10|AK049009|4262					AK049009	C230091E20Rik		ILMN_2574401	001580561	S	3982	CGGAGGAAACTCATGTCTTTTGAAACTTCCCTCTGGGAAACTTGACTGCC										
Mus musculus	RefSeq	ILMN_196207	ILMN_235199	A630034I12RIK	XM_920321.2	XM_920321.2		329790	94371467	XM_920321.2	A630034I12Rik	XP_925414.2	ILMN_1228703	005720634	S	443	AGCCATCCGCCGGGCGACGAGCGGGCGGCGGCGCACAGGAAGGTGCCTCA	4	-	11118306-11118355		PREDICTED: Mus musculus RIKEN cDNA A630034I12 gene (A630034I12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_249628	ILMN_249628	RHOX4E	NM_201236.3	NM_201236.3		194856	89242131	NM_201236.3	Rhox4e	NP_957688.2	ILMN_2806542	003830100	S	732	CAGAGTTAAGAGATGGTTTAAGAAGAGGAGAGAGCACTTCAGAAGAGGAC	X	+	34975233-34975242:34976554-34976593	XqA3.3	Mus musculus reproductive homeobox 4E (Rhox4e), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rhox4.5; Rhox4	Rhox4.5; Rhox4
Mus musculus	RefSeq	ILMN_217882	ILMN_217882	ANKRD32	NM_134071.2	NM_134071.2		105377	54020731	NM_134071.2	Ankrd32	NP_598832.2	ILMN_2688797	004390441	S	2073	AGAAAATGAAGTAGTTTTGTTCGGTATAAATGGTTTCACTGATTTTTAAA	13	-	77182568-77182617	13qC1	Mus musculus ankyrin repeat domain 32 (Ankrd32), mRNA.				MGC102362; AW545819; C730024G01Rik	MGC102362; AW545819; C730024G01Rik
Mus musculus	RefSeq	ILMN_234373	ILMN_234373	1810048J11RIK	NM_026327.3	NM_026327.3		67708	124430538	NM_026327.3	1810048J11Rik	NP_080603.2	ILMN_2856187	004590521	S	3902	GTCAGCCGTTCAAATGACTCAGACAACAGGTCCTCTGTGTCTAACGTGGG	12	+	73680682-73680731	12qC3	Mus musculus RIKEN cDNA 1810048J11 gene (1810048J11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU017192; 4932413O10	AU017192; 4932413O10
Mus musculus	RefSeq	ILMN_184547	ILMN_234373	1810048J11RIK	NM_026327.3	NM_026327.3		67708	124430538	NM_026327.3	1810048J11Rik	NP_080603.2	ILMN_2419559	002060132	S	4115	ACGTTCATATCAGTGTTTTAAATAATAATGAATCTTTTTGATGTTAACAT	12	+	73680895-73680944	12qC3	Mus musculus RIKEN cDNA 1810048J11 gene (1810048J11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU017192; 4932413O10	AU017192; 4932413O10
Mus musculus	RefSeq	ILMN_221095	ILMN_221095	PHF7	NM_027949.1	NM_027949.1		71838	21313645	NM_027949.1	Phf7	NP_082225.1	ILMN_3002610	006520370	S	1656	CTTCCCTCTTAGAAAAGCCCGAGTCCTCTGGTGGAAGAAGCTGCCCGTCC	14	-	32051160-32051209	14qB	Mus musculus PHD finger protein 7 (Phf7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW555949; 1700006H01Rik; 1700010P14Rik; AI427892	AW555949; 1700006H01Rik; 1700010P14Rik; AI427892
Mus musculus	Riken	ILMN_201935	ILMN_201935	SLC15A2	ri|8430408C16|PX00024N13|AK018393|963					AK018393	Slc15a2		ILMN_1222763	000060209	S	839	GGGACTCTACTCTTCCATGCACCCTTTCCACTAACCCTATCAGGCAAGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Catalysis of the transfer of oligopeptide from one side of the membrane to the other. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15334] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_247890	ILMN_247890	GLS2	NM_001033264.1	NM_001033264.1		216456	75677497	NM_001033264.1	Gls2	NP_001028436.1	ILMN_2840975	003130112	S	2068	ACCTCCAGATACAGCTCGAGAGTAGCCCGGGTCTTTACCCAGGTCCCCTT	10	+	127612616-127612665	10qD3	Mus musculus glutaminase 2 (liver, mitochondrial) (Gls2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [evidence IEA]	A330074B06Rik; AI195532; GLS; mKIAA4146; KIAA4146; GA; Lga	A330074B06Rik; AI195532; GLS; mKIAA4146; KIAA4146; GA; Lga
Mus musculus	RefSeq	ILMN_198901	ILMN_319418	LOC100048378	XR_034668.1	XR_034668.1		100048378	149259392	XR_034668.1	LOC100048378		ILMN_1257181	001470136	S	322	GGCTCGTTATGTAAGAGAAATGAAAACCTACATCCCCCTCCCCAAAGGGG					PREDICTED: Mus musculus similar to high-mobility group box 1 (LOC100048378), misc RNA.					
Mus musculus	RefSeq	ILMN_223953	ILMN_232292	APOA1BP	NM_144897.3	NM_144897.3		246703	146149106	NM_144897.3	Apoa1bp	NP_659146.1	ILMN_1240276	002710148	S	842	CCGTCTACAGTAAGGGAGGTGGGTAGGCAGGATTCTCAATAAAGACTTGG				3qF1	Mus musculus apolipoprotein A-I binding protein (Apoa1bp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	AI-BP; ESTM37; Apoa1ip; AA087124; AIBP	AI-BP; ESTM37; Apoa1ip; AA087124; AIBP
Mus musculus	RefSeq	ILMN_218771	ILMN_218771	EPM2AIP1	NM_175266.4	NM_175266.4		77781	148231656	NM_175266.4	Epm2aip1	NP_780475.1	ILMN_2699995	001820044	S	6919	CTGTGAATGCACCTCTCAGATCAAGGTAGGAAATATTTCTGTTACTCCAG				9qF3	Mus musculus EPM2A (laforin) interacting protein 1 (Epm2aip1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	A930003G21Rik; mKIAA0766	A930003G21Rik; mKIAA0766
Mus musculus	RefSeq	ILMN_203393	ILMN_218771	EPM2AIP1	NM_175266.4	NM_175266.4		77781	148231656	NM_175266.4	Epm2aip1	NP_780475.1	ILMN_1221110	006620424	S	3541	CTCCAGCGGAAGCTGATGGTGTATACTTGATAGGGAAGCCTAGTTCCAGC				9qF3	Mus musculus EPM2A (laforin) interacting protein 1 (Epm2aip1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	A930003G21Rik; mKIAA0766	A930003G21Rik; mKIAA0766
Mus musculus	RefSeq	ILMN_218771	ILMN_218771	EPM2AIP1	NM_175266.4	NM_175266.4		77781	148231656	NM_175266.4	Epm2aip1	NP_780475.1	ILMN_1256740	001510176	S	5630	TAAGTAAACTTGTTTCTGAGAAAGATGTCTTAGTCAGCCCTTCTGACTAC				9qF3	Mus musculus EPM2A (laforin) interacting protein 1 (Epm2aip1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	A930003G21Rik; mKIAA0766	A930003G21Rik; mKIAA0766
Mus musculus	RefSeq	ILMN_204234	ILMN_218771	EPM2AIP1	NM_175266.4	NM_175266.4		77781	148231656	NM_175266.4	Epm2aip1	NP_780475.1	ILMN_1226367	001430468	S	4142	CGACCCCCCAGAGGGGCGAGACTCATGGGTTGAGAACTTCTGGTTTAAGG				9qF3	Mus musculus EPM2A (laforin) interacting protein 1 (Epm2aip1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	A930003G21Rik; mKIAA0766	A930003G21Rik; mKIAA0766
Mus musculus	RefSeq	ILMN_217830	ILMN_217830	CREB5	NM_172728.1	NM_172728.1		231991	27370069	NM_172728.1	Creb5	NP_766316.1	ILMN_3007758	006480551	S	2413	GTCCCATGGAGGTGGCCAGGCTGGTGCGCTCATCTGAGTAGTTCTGATTT	6	+	53624950-53624999	6qB3	Mus musculus cAMP responsive element binding protein 5 (Creb5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	D430026C09Rik; Crebpa	D430026C09Rik; Crebpa
Mus musculus	RefSeq	ILMN_220777	ILMN_220777	DPP3	NM_133803.1	NM_133803.1		75221	19527017	NM_133803.1	Dpp3	NP_598564.1	ILMN_2726717	003850224	S	2534	GACAGAGCCAGGGCTCAAAGCATTCTCACCAAATCCAGCGCTCTTCGTGT	19	-	4907270-4907319	19qA	Mus musculus dipeptidylpeptidase 3 (Dpp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [evidence IEA]	C86324; 4930533O14Rik	C86324; 4930533O14Rik
Mus musculus	RefSeq	ILMN_193034	ILMN_220777	DPP3	NM_133803.1	NM_133803.1		75221	19527017	NM_133803.1	Dpp3	NP_598564.1	ILMN_1238417	004610070	S	2161	TAAGAACCTCCTCCAACTCGGGCCCATCCTCGGGAAACCGCTCACAGAAG	19	-	4907643-4907692	19qA	Mus musculus dipeptidylpeptidase 3 (Dpp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [evidence IEA]	C86324; 4930533O14Rik	C86324; 4930533O14Rik
Mus musculus	RefSeq	ILMN_220777	ILMN_220777	DPP3	NM_133803.1	NM_133803.1		75221	19527017	NM_133803.1	Dpp3	NP_598564.1	ILMN_2751925	004050372	S	2331	TGGACTTTGGTGCTACCTCAGCTGAGGGTGGTGATGCGAACCCCTTCCAT	19	-	4907473-4907522	19qA	Mus musculus dipeptidylpeptidase 3 (Dpp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [evidence IEA]	C86324; 4930533O14Rik	C86324; 4930533O14Rik
Mus musculus	RefSeq	ILMN_209938	ILMN_209938	GNG8	NM_010320.3	NM_010320.3		14709	84579910	NM_010320.3	Gng8	NP_034450.1	ILMN_1259653	002000288	S	768	AAGGATGACCCACTGGTGACTCCTGTCCCTGCCGCCGAGAATCCCTTCCG	7	+	17480632-17480681	7qA2	Mus musculus guanine nucleotide binding protein (G protein), gamma 8 (Gng8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	G(y)8	G(y)8
Mus musculus	MEEBO	ILMN_193823	ILMN_193823	2810409C01RIK	scl6919.1.1_246						2810409C01Rik		ILMN_2500748	007330563	S	12	AATTTGGAAAATCTACTAAACTTGTGTGTTATGTGGCTGTAAATGATGTA										
Mus musculus	RefSeq	ILMN_240998	ILMN_240998	A430089I19RIK	NM_177913.2	NM_177913.2		331195	31342684	NM_177913.2	A430089I19Rik	NP_808581.1	ILMN_2979672	005810594	S	1280	TCTCCATGCCCATCCTGAAGGACCTTTTACAGCAAACAGCCAACTGAAAG	5	+	8894-8939:8940-8943		Mus musculus RIKEN cDNA A430089I19 gene (A430089I19Rik), mRNA.					
Mus musculus	Riken	ILMN_206881	ILMN_206881	E030017D19RIK	ri|E030017D19|PX00204J11|AK086977|2144					AK086977	E030017D19Rik		ILMN_1219009	000870703	S	1964	TCCTGAAGCACTGTGGAATACATGGGCTCTGTTGGTTATTAGCCAGGCAG										
Mus musculus	RefSeq	ILMN_215813	ILMN_224383	DTWD2	NM_026854.2	NM_026854.2		68857	142370433	NM_026854.2	Dtwd2	NP_081130.1	ILMN_2663895	000940379	S	1553	GGAGACGTTACTGTTTACAGTTGTACTCGGACTCAGCTAATGTGACTCAC	18	-	49857315-49857364	18qD1	Mus musculus DTW domain containing 2 (Dtwd2), mRNA.				AI414673; BB115449; 8030470C17Rik; 1190002H09Rik	AI414673; BB115449; 8030470C17Rik; 1190002H09Rik
Mus musculus	RefSeq	ILMN_202110	ILMN_217193	ZC3H13	NM_026083.2	NM_026083.2		67302	61742809	NM_026083.2	Zc3h13	NP_080359.2	ILMN_2547078	004120102	S	48	TTGCTCTGCAGTGGCTTCTGTGCGTCTCTCGTCTCGTGTCCGGAGCTCTC	14	+	75684227-75684276	14qD3	Mus musculus zinc finger CCCH type containing 13 (Zc3h13), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C87618; 4930570G11Rik; 3110050K21Rik; 2600010B19Rik	C87618; 4930570G11Rik; 3110050K21Rik; 2600010B19Rik
Mus musculus	RefSeq	ILMN_211384	ILMN_217193	ZC3H13	NM_026083.2	NM_026083.2		67302	61742809	NM_026083.2	Zc3h13	NP_080359.2	ILMN_2658107	006250687	S	5694	AAAATAATGTGAAAATGTCTAGATTTAGTAATTTCGTCTGTGTCTTCATT	14	+	75743776-75743825	14qD3	Mus musculus zinc finger CCCH type containing 13 (Zc3h13), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C87618; 4930570G11Rik; 3110050K21Rik; 2600010B19Rik	C87618; 4930570G11Rik; 3110050K21Rik; 2600010B19Rik
Mus musculus	RefSeq	ILMN_217193	ILMN_217193	ZC3H13	NM_026083.2	NM_026083.2		67302	61742809	NM_026083.2	Zc3h13	NP_080359.2	ILMN_2680128	002680746	S	2314	GAGACACTCGGGATCCGGCCAGGGATTCTTCCTTTGAGAGAAGGCATGGA	14	+	75724331-75724380	14qD3	Mus musculus zinc finger CCCH type containing 13 (Zc3h13), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C87618; 4930570G11Rik; 3110050K21Rik; 2600010B19Rik	C87618; 4930570G11Rik; 3110050K21Rik; 2600010B19Rik
Mus musculus	RefSeq	ILMN_197312	ILMN_197312	LOC218499	XM_138804.1	XM_138804.1			20909345	XM_138804.1	LOC218499		ILMN_2527682	003420133	S	145	TACACGGGTGCCAACAGAAGCAACGGCGTCATCAGGGAGAGGATACCTGG										
Mus musculus	RefSeq	ILMN_214827	ILMN_214827	TCEB3	NM_013736.4	NM_013736.4		27224	146149217	NM_013736.4	Tceb3	NP_038764.2	ILMN_2652394	006510647	S	4097	GAGGCACCCAGTTTACCTAGAGCCAGATTTTCTAGCCCTTCAAGAGTGTC				4qD3	Mus musculus transcription elongation factor B (SIII), polypeptide 3 (Tceb3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Tceb3a; AA408125; 110kDa	Tceb3a; AA408125; 110kDa
Mus musculus	RefSeq	ILMN_211371	ILMN_211371	REST	NM_011263.1	NM_011263.1		19712	33859605	NM_011263.1	Rest	NP_035393.1	ILMN_2615160	005720605	S	2904	CCCTCCTATCACGTTGGCTGAAAACGAGTCTCAGGAAATTGATGAAGATG	5	+	77711664-77711713	5qC3.3	Mus musculus RE1-silencing transcription factor (Rest), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AA407358; MGC150099; NRSF; 2610008J04Rik	AA407358; MGC150099; NRSF; 2610008J04Rik
Mus musculus	MEEBO	ILMN_215560	ILMN_215560	BC032266	scl000204.1_1090				47679092	NM_001001326	BC032266		ILMN_2661027	000520674	S	1296	GGCTGACAAGAATCCTAAGACTAAGCCAAGCAATGGTCTACCTCCTTCAC										
Mus musculus	Riken	ILMN_205490	ILMN_205490	D030047H15RIK	ri|D030047H15|PX00180M02|AK050966|2537					AK050966	D030047H15Rik		ILMN_1225352	004610368	S	2171	GCCACACCCCAACCCTTCACTGGGGGGATTCTAGGCAGATGTTTTACCAC										
Mus musculus	RefSeq	ILMN_201188	ILMN_201188	LOC384914	XM_357937.1	XM_357937.1			38089717	XM_357937.1	LOC384914		ILMN_1217587	004730609	S	902	AGCCACAGACCTCAGGCAGTCAATCAAAAGCTGCCCGTCATACCCCCTCC										
Mus musculus	RefSeq	ILMN_250781	ILMN_250781	IQGAP3	NM_001033484.1	NM_001033484.1		404710	118344445	NM_001033484.1	Iqgap3	NP_001028656.1	ILMN_2971999	005270717	S	5376	CCATGACAGCTGAGTGCACACCTCAAATCTCCTTTCCCCACTTGTGGTGG	3	+	87924670-87924719	3qF1	Mus musculus IQ motif containing GTPase activating protein 3 (Iqgap3), mRNA. XM_980709 XM_987883 XM_987929 XM_987972 XM_988004 XM_988041 XM_988104				D030034H08	D030034H08
Mus musculus	RefSeq	ILMN_199814	ILMN_250781	IQGAP3	NM_001033484.1	NM_001033484.1		404710	118344445	NM_001033484.1	Iqgap3	NP_001028656.1	ILMN_1256718	001740612	S	4599	AAGCAGCCGTCTCTTCACTACACAGCCGCCCAGCTCCTAGAAAAGGGCGT	3	+	87921140-87921189	3qF1	Mus musculus IQ motif containing GTPase activating protein 3 (Iqgap3), mRNA. XM_980709 XM_987883 XM_987929 XM_987972 XM_988004 XM_988041 XM_988104				D030034H08	D030034H08
Mus musculus	RefSeq	ILMN_194534	ILMN_248429	SPOP	NM_025287.2	NM_025287.2		20747	118026916	NM_025287.2	Spop	NP_079563.2	ILMN_2706567	000540673	S	2381	GCATAGGAGCCGGTCCTGTCCCTTCTGATTAGCCCCTCTTCCAAAGGGGA	11	+	95354223-95354272	11qD	Mus musculus speckle-type POZ protein (Spop), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcif1; AI315626; TEF2	Pcif1; AI315626; TEF2
Mus musculus	RefSeq	ILMN_201534	ILMN_201534	RAET1E	NM_198193.2	NM_198193.2		379043	118130823	NM_198193.2	Raet1e	NP_937836.1	ILMN_1231358	000240441	S	662	CCTTGTGCAACAATTGAAATACTTCATACCCCAATGCAGACAGAAAATTG	10	+	21901112-21901161	10qA3	Mus musculus retinoic acid early transcript 1E (Raet1e), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211170	ILMN_211170	OLFR994	NM_146433.1	NM_146433.1		258425	33239125	NM_146433.1	Olfr994	NP_666644.1	ILMN_2613253	006330754	S	583	TTCATGCTAATTTTGATTTTTGTTGGATTTAACCTAACATTCACTGTGTC	2	-	85270352-85270401	2qD	Mus musculus olfactory receptor 994 (Olfr994), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR203-4	MOR203-4
Mus musculus	RefSeq	ILMN_208899	ILMN_208899	GLTP	NM_019821.2	NM_019821.2		56356	31560403	NM_019821.2	Gltp	NP_062795.2	ILMN_2971816	006180411	S	1361	TGTACCAGCAAGCCTTTTCAACCAACTGACTAGGCGCACACAGGTGACCC	5	-	115119709-115119758	5qF	Mus musculus glycolipid transfer protein (Gltp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 46836] [evidence IEA]	Interacting selectively with a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic moiety such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate [goid 51861] [evidence IEA]; Enables the directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 17089] [evidence IEA]	1110001F24Rik; C76925; C77564	1110001F24Rik; C76925; C77564
Mus musculus	MEEBO	ILMN_191936	ILMN_191936	BC003236	scl21709.7_173				31981396	NM_030249	BC003236		ILMN_2744138	006100719	S	2889	AAGTCATTCTCCGTTTCCTGCATCACTTCTTGAGTAGTGAAGTCACGTCT										
Mus musculus	MEEBO	ILMN_213100	ILMN_213100	5830484A20RIK	scl00109032.1_121				42475975	NM_175397	5830484A20Rik		ILMN_1214911	000010369	S	1285	GTGGTAAGGCCAAAGGGACTTTGTTCCAAGAGAAACTGAAGCAAGGAGCC										
Mus musculus	MEEBO	ILMN_192731	ILMN_192731	9627947_61	9627947_61						9627947_61		ILMN_1217876	002750427	S	1	GCACAGGCAGTTGGTAATGTTGGTTGCTATAATGCAGCAAATGTGAACTT										
Mus musculus	Riken	ILMN_204367	ILMN_204367	LPIN2	ri|C730002M18|PX00086I02|AK050018|1433					AK050018	Lpin2		ILMN_2564426	002680544	S	1350	CATCGTTATTAGATGCAGAGCCCTGTTCCCAGCCCATCAGGCAGAGGCTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214648	ILMN_253032	SLC25A37	NM_026331.3	NM_026331.3		67712	88759342	NM_026331.3	Slc25a37	NP_080607.2	ILMN_2696610	002320553	S	3859	CCCTCCAGTGTCACCCCCAAGGCTATATCTCCAACATACTGCTATGCCAT	14	-	69860161-69860210	14qD2	Mus musculus solute carrier family 25, member 37 (Slc25a37), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of iron ions into, out of or within a mitochondrion [goid 48250] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [evidence IMP]	1700020E22Rik; 4930526G11Rik; Mscp; Frascati; AI848481; mitoferrin; C330015G08Rik; 4930513O14Rik; Mfrn	1700020E22Rik; 4930526G11Rik; Mscp; Frascati; AI848481; mitoferrin; C330015G08Rik; 4930513O14Rik; Mfrn
Mus musculus	RefSeq	ILMN_219994	ILMN_219994	PTGDS2	NM_019455.2	NM_019455.2		54486	31980907	NM_019455.2	Ptgds2	NP_062328.2	ILMN_2981783	005390768	S	770	GTGTATAGCAACTCAAGGGGTGTTGCAGTTTTGTCTTTATCTGCAGGCAC	6	-	65049349-65049398	6qC1	Mus musculus prostaglandin D2 synthase 2, hematopoietic (Ptgds2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [evidence IDA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-9-alpha,15-dihydroxy-11-oxoprosta-5,13-dienoate [goid 4667] [evidence IDA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence ISO]	MGC151112; H-PGDS; MGC151114	MGC151112; H-PGDS; MGC151114
Mus musculus	RefSeq	ILMN_210477	ILMN_210477	4930488E11RIK	NM_207267.3	NM_207267.3		399591	126723611	NM_207267.3	4930488E11Rik	NP_997150.1	ILMN_2606004	000990408	S	182	TCTTCCGTCGAATGAAAACAAGATGAGCGATAAACCAGACTTGTCAGAAG	X	-	133489993-133490021:133491274-133491294	XqF1	Mus musculus RIKEN cDNA 4930488E11 gene (4930488E11Rik), mRNA.				RP23-389M3.7	RP23-389M3.7
Mus musculus	Riken	ILMN_203926	ILMN_203926	A130020K16RIK	ri|A130020K16|PX00121J10|AK037473|4075					AK037473	A130020K16Rik		ILMN_2561037	001240465	S	3688	CACGTGCAGGGGAAATGAAGTGTACAGTGTGTGCTTTCAGAGAGGCGGCC										
Mus musculus	RefSeq	ILMN_217514	ILMN_217514	BC050210	NM_201365.1	NM_201365.1		381337	41235749	NM_201365.1	BC050210	NP_958753.1	ILMN_2684160	004850154	S	1216	TGCCGCGCAGGCCTGGATGTAGGGTTGTGCCTGCTGCCCAAGACTGACCT	1	-	36657304-36657353	1qB	Mus musculus cDNA sequence BC050210 (BC050210), mRNA.				MGC60970; Gm990	MGC60970; Gm990
Mus musculus	RefSeq	ILMN_223744	ILMN_223744	VAT1L	NM_173016.3	NM_173016.3		270097	118129925	NM_173016.3	Vat1l	NP_766604.2	ILMN_1226356	000450452	S	3522	GGTCGAGCTTTACTAGAACGAACCGAACATCGTCTAATGTGTCTGTGGCT	8	+	116897837-116897886	8qE1	Mus musculus vesicle amine transport protein 1 homolog-like (T. californica) (Vat1l), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	9430073I07; mKIAA1576	9430073I07; mKIAA1576
Mus musculus	RefSeq	ILMN_211925	ILMN_211925	HOXC12	NM_010463.1	NM_010463.1		15421	33859567	NM_010463.1	Hoxc12	NP_034593.1	ILMN_2620810	003420014	S	708	CATCACACGCCAGCGTCGGAGGGAACTCTCGGACCGCTTGAATCTTAGTG	15	+	102768813-102768862	15qF3	Mus musculus homeo box C12 (Hoxc12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hox-3.8	Hox-3.8
Mus musculus	RefSeq	ILMN_221695	ILMN_221695	E430018J23RIK	NM_198011.1	NM_198011.1		101604	37574105	NM_198011.1	E430018J23Rik	NP_932128.1	ILMN_2881039	004290050	S	1696	TTTCCAGATGCATCTGCACACACTCCGGATGTACCGTCGTCTTGGCGTCT	7	-	134534765-134534814	7qF3	Mus musculus RIKEN cDNA E430018J23 gene (E430018J23Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI480612	AI480612
Mus musculus	RefSeq	ILMN_221695	ILMN_221695	E430018J23RIK	NM_198011.1	NM_198011.1		101604	37574105	NM_198011.1	E430018J23Rik	NP_932128.1	ILMN_2739163	001770035	S	1339	CCCACAGTGGTGAACGACCCTACCCCTGCCCTCAGTGTGGCAGACGCTTT	7	-	134535122-134535171	7qF3	Mus musculus RIKEN cDNA E430018J23 gene (E430018J23Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI480612	AI480612
Mus musculus	RefSeq	ILMN_214271	ILMN_214271	ACOT2	NM_134188.2	NM_134188.2		171210	40538845	NM_134188.2	Acot2	NP_598949.2	ILMN_2745889	001430600	S	983	AAATGACCAAAGATGGTCTCTTGGATGTCGTGGAAGCTCTGCAAAGCCCT	12	+	85333639-85333688	12qD1	Mus musculus acyl-CoA thioesterase 2 (Acot2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence TAS]	AA571646; MTE-I; Mte1	AA571646; MTE-I; Mte1
Mus musculus	RefSeq	ILMN_214271	ILMN_214271	ACOT2	NM_134188.2	NM_134188.2		171210	40538845	NM_134188.2	Acot2	NP_598949.2	ILMN_2840492	002470025	S	2118	TATGTCATGAATTAAGGGGGAACCTTAAGTGTAAATATTCTTATTAAAAT	12	+	85334774-85334823	12qD1	Mus musculus acyl-CoA thioesterase 2 (Acot2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence TAS]	AA571646; MTE-I; Mte1	AA571646; MTE-I; Mte1
Mus musculus	RefSeq	ILMN_214271	ILMN_214271	ACOT2	NM_134188.2	NM_134188.2		171210	40538845	NM_134188.2	Acot2	NP_598949.2	ILMN_1243165	003870634	S	2115	TTTTATGTCATGAATTAAGGGGGAACCTTAAGTGTAAATATTCTTATTAA	12	+	85334771-85334820	12qD1	Mus musculus acyl-CoA thioesterase 2 (Acot2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence TAS]	AA571646; MTE-I; Mte1	AA571646; MTE-I; Mte1
Mus musculus	RefSeq	ILMN_219286	ILMN_219286	GPATCH2	NM_026367.3	NM_026367.3		67769	34328450	NM_026367.3	Gpatch2	NP_080643.3	ILMN_2841032	000610121	S	4331	ACCTGGAAATTGGGCACCGTGTTTGAGCACAGCAGTTTGGGACTGGCTGC	1	+	189175118-189175167	1qH5	Mus musculus G patch domain containing 2 (Gpatch2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AW491060; Gpatc2; 5830436K05Rik; AI427714; AW107440; AI447508	AW491060; Gpatc2; 5830436K05Rik; AI427714; AW107440; AI447508
Mus musculus	RefSeq	ILMN_223448	ILMN_223448	OLFR1008	NM_146866.1	NM_146866.1		258866	22129140	NM_146866.1	Olfr1008	NP_667077.1	ILMN_2764242	007200647	S	601	TTATTTTCAGCATTGAATTTGCTCTCCTCTCTTCTGATAGTCCTTGGATT	2	+	85530188-85530237	2qD	Mus musculus olfactory receptor 1008 (Olfr1008), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR187-3	MOR187-3
Mus musculus	RefSeq	ILMN_193220	ILMN_254113	TMEM147	NM_027215.2	NM_027215.2		69804	120952691	NM_027215.2	Tmem147	NP_081491.2	ILMN_2775751	006940014	S	730	GGACTGCTGGCCCTCAGCACCTTGGCCCTGTATGTTGCTGTTGTCAATGT	7	-	31512808-31512857	7qB1	Mus musculus transmembrane protein 147 (Tmem147), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5033425B17Rik; 2010004E11Rik; Nifie14; MGC6895	5033425B17Rik; 2010004E11Rik; Nifie14; MGC6895
Mus musculus	RefSeq	ILMN_236473	ILMN_236473	LOC236749	NM_001034864.1	NM_001034864.1		236749	85702204	NM_001034864.1	LOC236749	NP_001030036.1	ILMN_3132434	005360563	A	1138	TGTGATGCTCAAATCCAAGCCTGTGTGCAAGCCCTGCTACATGAAGAACC	X	+	23064211-23064260	XqA2	Mus musculus similar to hypothetical protein (LOC236749), mRNA.					
Mus musculus	Riken	ILMN_205338	ILMN_205338	A630034E16RIK	ri|A630034E16|PX00145M13|AK041749|2476					AK041749	A630034E16Rik		ILMN_1228446	006550246	S	2226	GGGTCCCACAATCCTTAGGGGCTTAGTGTTTGATGCCTTTGCTGTCCTAC										
Mus musculus	RefSeq	ILMN_221020	ILMN_313725	LOC100047299	XM_001478316.1	XM_001478316.1		100047299	149253757	XM_001478316.1	LOC100047299	XP_001478366.1	ILMN_2730013	005390368	S	2202	GAAGAGAAACAGGATAAAAGCAACCTAAGAGAACTCTAGTGAAGACGGCT					PREDICTED: Mus musculus similar to NOL1/NOP2/Sun domain family, member 7, transcript variant 1 (LOC100047299), mRNA.					
Mus musculus	RefSeq	ILMN_206245	ILMN_241740	ERMP1	NM_001081213.1	NM_001081213.1		226090	124487056	NM_001081213.1	Ermp1	NP_001074682.1	ILMN_1216239	006960195	S	1600	CCAGCGACCTGTATCTGGGAGAACTGTTCTTCGACACCTCCCTGTTCGTG	19	-	29698251-29698300	19qC1	Mus musculus endoplasmic reticulum metallopeptidase 1 (Ermp1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	mKIAA1815; D19Wsu12e; Fxna; MGC28180; D19Ertd410e	mKIAA1815; D19Wsu12e; Fxna; MGC28180; D19Ertd410e
Mus musculus	RefSeq	ILMN_204156	ILMN_241740	ERMP1	NM_001081213.1	NM_001081213.1		226090	124487056	NM_001081213.1	Ermp1	NP_001074682.1	ILMN_1242286	006350458	S	1320	GTCATGGCCGTGGTTCTGTACCTGGGGAAGAAACTTCTGCGGCCCAAGCA	19	-	29703098-29703147	19qC1	Mus musculus endoplasmic reticulum metallopeptidase 1 (Ermp1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	mKIAA1815; D19Wsu12e; Fxna; MGC28180; D19Ertd410e	mKIAA1815; D19Wsu12e; Fxna; MGC28180; D19Ertd410e
Mus musculus	RefSeq	ILMN_221677	ILMN_241740	ERMP1	NM_001081213.1	NM_001081213.1		226090	124487056	NM_001081213.1	Ermp1	NP_001074682.1	ILMN_2738893	006290356	S	4910	CCCCAACCCTGATTTTGCTGTGAAAGAGATTAGACCACAAGCCAGCCTAG	19	-	29684807-29684856	19qC1	Mus musculus endoplasmic reticulum metallopeptidase 1 (Ermp1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	mKIAA1815; D19Wsu12e; Fxna; MGC28180; D19Ertd410e	mKIAA1815; D19Wsu12e; Fxna; MGC28180; D19Ertd410e
Mus musculus	RefSeq	ILMN_209266	ILMN_209266	AI317395	NM_144821.2	NM_144821.2		215929	31542075	NM_144821.2	AI317395	NP_659070.1	ILMN_2987599	006220646	S	2324	ATGCATAGCTCTTCAACATGGCTCTGCTTTCAGGTCCTCCTGGGGGCTCT	10	-	39691294-39691343	10qB1	Mus musculus expressed sequence AI317395 (AI317395), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	MGC25869; AI482555	MGC25869; AI482555
Mus musculus	RefSeq	ILMN_219225	ILMN_253830	OLFR386	NM_207224.1	NM_207224.1		193053	46402198	NM_207224.1	Olfr386	NP_997107.1	ILMN_2705909	001300187	S	589	CTAATGATATTTATCTTGGGAACACTTGATACTGTGGTGCCATTCTTACT	11	+	73416672-73416721	11qB4	Mus musculus olfactory receptor 386 (Olfr386), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	GA_x6K02T2P1NL-3773152-3774090	GA_x6K02T2P1NL-3773152-3774090
Mus musculus	Riken	ILMN_204047	ILMN_204047	A830050C03RIK	ri|A830050C03|PX00155I24|AK043914|1170					AK043914	A830050C03Rik		ILMN_2561959	004900035	S	934	GCTTTGCTCAGTCTGATGTCTTCTGCCAGTCAAAGTCCAAAAATTTAATT										
Mus musculus	RefSeq	ILMN_210173	ILMN_210173	RNASE4	NM_021472.3	NM_021472.3		58809	141801947	NM_021472.3	Rnase4	NP_067447.2	ILMN_1235657	005810398	S	813	CTCTAACACCCCTTGAGACCAATTCTGCCACTGTATTTAGAAGCTTTGAG	14	+	51725236-51725285	14qC1	Mus musculus ribonuclease, RNase A family 4 (Rnase4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	C730049F20Rik; RNase 4	C730049F20Rik; RNase 4
Mus musculus	MEEBO	ILMN_215875	ILMN_215875	FBXO4	scl0002499.1_186				33859770	NM_134099	Fbxo4		ILMN_2777555	006450341	S	1144	CAGATGTAAAGAGAATGCCTTGTTTTTATTTAGCTCATGAGCTGCACCTC							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]			
Mus musculus	MEEBO	ILMN_215875	ILMN_215875	FBXO4	scl0002499.1_186				33859770	NM_134099	Fbxo4		ILMN_2772920	003460162	S	1413	GCTGGGTTTCTGACACTTTACCATGAATGAGTTGCAAGTTTCAGTCCTAC							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]			
Mus musculus	RefSeq	ILMN_190678	ILMN_236866	ZFP516	NM_183033.1	NM_183033.1		329003	33942117	NM_183033.1	Zfp516	NP_898854.1	ILMN_1245892	004540392	S	4581	ATATACCTCTTCCTTAGTCACGCAAGTTCACGTTTCTGCGGTGGGGTGAA	18	+	83171771-83171820	18qE3	Mus musculus zinc finger protein 516 (Zfp516), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Zfp26l; D230016L03; C330029B10Rik; mKIAA0222	Zfp26l; D230016L03; C330029B10Rik; mKIAA0222
Mus musculus	RefSeq	ILMN_219940	ILMN_219940	SLC25A40	NM_178766.3	NM_178766.3		319653	141801661	NM_178766.3	Slc25a40	NP_848881.1	ILMN_2750386	004220070	S	3420	AGGGAGAAGGATACATACAGATGACCAATCTAGATACAAGCACCTAGCAG	5	+	8459691-8459740	5qA1	Mus musculus solute carrier family 25, member 40 (Slc25a40), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	B230315F11Rik	B230315F11Rik
Mus musculus	RefSeq	ILMN_219940	ILMN_219940	SLC25A40	NM_178766.3	NM_178766.3		319653	141801661	NM_178766.3	Slc25a40	NP_848881.1	ILMN_2744091	001190725	S	2654	CCCTCTTAACCTTATGTGTTCTTTGATTTAAACTCCCATTTTACTTTAGG	5	+	8458925-8458974	5qA1	Mus musculus solute carrier family 25, member 40 (Slc25a40), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	B230315F11Rik	B230315F11Rik
Mus musculus	RefSeq	ILMN_219940	ILMN_219940	SLC25A40	NM_178766.3	NM_178766.3		319653	141801661	NM_178766.3	Slc25a40	NP_848881.1	ILMN_1250317	003390767	S	1131	CAACCTGGACTATAATGAAGAACATTGTTGCTGACAAAGGATTTTCTGGG	5	+	8452767-8452816	5qA1	Mus musculus solute carrier family 25, member 40 (Slc25a40), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	B230315F11Rik	B230315F11Rik
Mus musculus	MEEBO	ILMN_212087	ILMN_212087	KREMEN	scl40569.11_79				52345422	NM_032396	Kremen		ILMN_1228479	004390414	S	4279	TGATGTCTGAGGTCTGCTTTGGGTACCGCCCTGGGAACTGCTAACCTCCG										
Mus musculus	RefSeq	ILMN_211313	ILMN_247528	4930538K18RIK	NM_029198.3	NM_029198.3		75180	146149250	NM_029198.3	4930538K18Rik	NP_083474.1	ILMN_2614559	006350538	S	919	GCTCTGTGGGCTTTACGCTTAGCATGCTGGACCAAGACCTGCCTGTCCTC				4qD2.1	Mus musculus RIKEN cDNA 4930538K18 gene (4930538K18Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RP23-344D2.8	RP23-344D2.8
Mus musculus	Riken	ILMN_205612	ILMN_205612	SLC13A1	ri|B930093I16|PX00166M02|AK047580|3146					AK047580	Slc13a1		ILMN_1251437	000540397	S	3015	CCTAGTCATGGTGCCACATACCTTACTCCCTTAGCCCTTGGGAAGCACAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213785	ILMN_213785	CYP2R1	NM_177382.3	NM_177382.3		244209	34330187	NM_177382.3	Cyp2r1	NP_796356.2	ILMN_1248189	001940017	S	1369	CAGCTGGCTCGAATGGAAATGTTCTTGTTTTTTACATCATTACTTCAGCA	7	-	121693888-121693937	7qF1	Mus musculus cytochrome P450, family 2, subfamily r, polypeptide 1 (Cyp2r1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 42359] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol + NADPH + O2 = 5-beta-cholestane-3-alpha,7-alpha,12-alpha,26-tetraol + NADP+ + H2O [goid 47749] [evidence IEA]; Catalysis of the hydroxylation of C-25 of calciferol (vitamin D3) to form 25-hydroxycalciferol [goid 30343] [evidence IDA]	MGC124198; MGC124199	MGC124198; MGC124199
Mus musculus	RefSeq	ILMN_212804	ILMN_212804	ODF1	NM_008757.2	NM_008757.2		18285	142364780	NM_008757.2	Odf1	NP_032783.1	ILMN_2630501	001300603	S	596	TGATCAAGTCAAAGTGCGCGTGAAAGATGGGAAGGTCTGCGTGTCGGCCG	15	+	38155979-38156028	15qB3.1	Mus musculus outer dense fiber of sperm tails 1 (Odf1), mRNA.	Structure or material found in the flagella of mammalian sperm that surrounds each of the nine microtubule doublets, giving a 9 + 9 + 2 arrangement rather than the 9 + 2 pattern usually seen. These dense fibers are stiff and noncontractile [goid 1520] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]			
Mus musculus	MEEBO	ILMN_194230	ILMN_194230	MT-ND5	scl0017721.1_131						mt-Nd5		ILMN_2504544	001820209	S	20	ATTCCTGTGAGGGCGAGGCTTCCGATTACTAGGCATGATGATGTGAATGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218058	ILMN_246560	KLHL14	NM_001081403.1	NM_001081403.1		225266	124487136	NM_001081403.1	Klhl14	NP_001074872.1	ILMN_2691014	000650603	S	3718	GAGCTGTTTCCAAAATCGGATTCTCAGCTGTCACTGTTTCTTCCAAAAGT	18	-	21709128-21709177	18qA2	Mus musculus kelch-like 14 (Drosophila) (Klhl14), mRNA.				AI785250; 6330403N15Rik	AI785250; 6330403N15Rik
Mus musculus	RefSeq	ILMN_217007	ILMN_217007	ZFP473	NM_178734.2	NM_178734.2		243963	31341075	NM_178734.2	Zfp473	NP_848849.1	ILMN_2811918	002070079	S	3652	TCCTCAGGGCTATGGTGAGGATTAAATTTTGAGCATCTGATACCTGGCAC	7	-	44599631-44599680	7qB4	Mus musculus zinc finger protein 473 (Zfp473), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4932441F21; D030014N22Rik	4932441F21; D030014N22Rik
Mus musculus	RefSeq	ILMN_197524	ILMN_197524	LOC380925	XM_354832.1	XM_354832.1			38076419	XM_354832.1	LOC380925		ILMN_1219071	002510736	S	431	CACTAAGAAACGCAACAACCAGATAAGAAAGACATCCTATGCGCAGCTCT										
Mus musculus	RefSeq	ILMN_201061	ILMN_201061	LOC381978	XM_356018.1	XM_356018.1			38088401	XM_356018.1	LOC381978		ILMN_1230886	004810431	S	57	ATGGTAGCGTGCCCATGATCCAGACTCGGGGGAGACTGAGGCAGGAGGTT										
Mus musculus	RefSeq	ILMN_228682	ILMN_228682	POLG2	NM_015810.1	NM_015810.1		50776	7657466	NM_015810.1	Polg2	NP_056625.1	ILMN_2896483	001980390	S	1246	CTGGTCACTGAGACTACGCTGGAAAACGGGCTAATCCAGCTGCGGAGCAG	11	-	106629704-106629753	11qE1	Mus musculus polymerase (DNA directed), gamma 2, accessory subunit (Polg2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of coupling glycine to glycyl-tRNA, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6426] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IDA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly) [goid 4820] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]		
Mus musculus	RefSeq	ILMN_211386	ILMN_211386	KL	NM_013823.1	NM_013823.1		16591	7705569	NM_013823.1	Kl	NP_038851.1	ILMN_1253148	004890180	S	4429	GGTCACAGCACATAGCTCATCACCCTGTTATTCTTCATCTTGCAATGTGG	5	+	151791048-151791097	5qG3	Mus musculus klotho (Kl), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP];  [goid 6112] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate [goid 4566] [evidence IEA]	alpha-kl	alpha-kl
Mus musculus	RefSeq	ILMN_211386	ILMN_211386	KL	NM_013823.1	NM_013823.1		16591	7705569	NM_013823.1	Kl	NP_038851.1	ILMN_2930843	000160307	S	4827	GCTGTCCTGGAACTCACTTTGCAGACCAGGCTAGCCTCAAACTCTTATTC	5	+	151791446-151791495	5qG3	Mus musculus klotho (Kl), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP];  [goid 6112] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate [goid 4566] [evidence IEA]	alpha-kl	alpha-kl
Mus musculus	RefSeq	ILMN_213868	ILMN_231445	FUK	NM_181666.1	NM_181666.1		234730	41281970	NM_181666.1	Fuk	NP_858052.1	ILMN_2641632	001430768	S	3509	AGGGAGGTCTTAGTCACAGTGTCTCATGTGCACTCTACAAATTCCATGGC	8	-	113406642-113406691	8qE1	Mus musculus fucokinase (Fuk), transcript variant 2, mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + 6-deoxy-L-galactose = ADP + 6-deoxy-L-galactose 1-phosphate [goid 50201] [evidence IEA]	1110046B12Rik; AI303278	1110046B12Rik; AI303278
Mus musculus	RefSeq	ILMN_231445	ILMN_231445	FUK	NM_181666.1	NM_181666.1		234730	41281970	NM_181666.1	Fuk	NP_858052.1	ILMN_3120565	006110279	A	3529	GTCTCATGTGCACTCTACAAATTCCATGGCCCAGTGTAGGCCTCCTAGGG	8	-	113406622-113406671	8qE1	Mus musculus fucokinase (Fuk), transcript variant 2, mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + 6-deoxy-L-galactose = ADP + 6-deoxy-L-galactose 1-phosphate [goid 50201] [evidence IEA]	1110046B12Rik; AI303278	1110046B12Rik; AI303278
Mus musculus	MEEBO	ILMN_191604	ILMN_191604	G630013P12RIK	scl43605.23_398				51767887	XM_127501	G630013P12Rik		ILMN_1247474	001400608	S	4	ACCGGTGCTAGGAAGAGAAATACAATCAGTGTGCTTAGCTTTAAGGTGGG										
Mus musculus	RefSeq	ILMN_200658	ILMN_200658	LOC383439	XM_357056.1	XM_357056.1			38084919	XM_357056.1	LOC383439		ILMN_2539543	004260427	S	473	TCATCACCCAGCAGCTGGCACATCTCCTCAGAGTTTCTTTGTACAGCAGC										
Mus musculus	RefSeq	ILMN_200175	ILMN_200175	LOC385870	XM_358978.1	XM_358978.1			38080792	XM_358978.1	LOC385870		ILMN_1222924	002360524	S	281	ACACAGGGACAGATCCACAAGACAGTGTTCAGGCAAGCACAGATTCAGAC										
Mus musculus	Riken	ILMN_206418	ILMN_206418	9130020G22RIK	ri|C230043B16|PX00174J04|AK082376|1957					AK082376	9130020G22Rik		ILMN_2579927	001230551	S	1895	GAGACCAATCTGGGCCACACAGAGTTCAAGGCCAGCCTGTACCCAAAGAG										
Mus musculus	RefSeq	ILMN_199302	ILMN_199302	LOC245252	XM_142873.3	XM_142873.3			38094019	XM_142873.3	LOC245252		ILMN_1241572	002940386	S	606	ACCCTATGAATGTAATCAATGTGGAACACATACCGGAGAGAAACCCTATG										
Mus musculus	RefSeq	ILMN_197014	ILMN_197014	LOC226486	XM_129521.2	XM_129521.2			38073506	XM_129521.2	LOC226486		ILMN_2526599	006650544	S	24	TGTGCGTGTGAACTTCACTGAGGAAGATTGGGATTTGCTGGATCCTTCCC										
Mus musculus	RefSeq	ILMN_197135	ILMN_197135	LOC332427	XM_284776.2	XM_284776.2			38074250	XM_284776.2	LOC332427		ILMN_2527040	000270414	S	788	GGAATACAGCTCAGCAGCTGAAAGGTGGTCTGACTGCTTTTAAGTCGGGG										
Mus musculus	RefSeq	ILMN_212825	ILMN_248226	OLFR980	NM_147106.1	NM_147106.1		259110	22128760	NM_147106.1	Olfr980	NP_667317.1	ILMN_1219492	006220494	S	538	GGACCACCCATCCTCAAGCTGGCCTGTGCAGACACATCTGCCATCGAGAT	9	-	39813945-39813994	9qA5.1	Mus musculus olfactory receptor 980 (Olfr980), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR223-2	MOR223-2
Mus musculus	RefSeq	ILMN_199458	ILMN_233547	LOC668760	XM_001003481.1	XM_001003481.1		668760	94392524	XM_001003481.1	LOC668760	XP_001003481.1	ILMN_2535282	004570095	S	273	ACACTGCTGCTGTGGGGAAGGCATGAAGCACCACAGACACTGCTGCTGTG	12	+	29634661-29634710		PREDICTED: Mus musculus hypothetical protein LOC668760 (LOC668760), mRNA.					
Mus musculus	RefSeq	ILMN_218775	ILMN_319767	NEB	NM_010889.1	NM_010889.1		17996	148222064	NM_010889.1	Neb	NP_035019.1	ILMN_1235161	007040328	S	10435	GCCAGACCTTGGTCAGCGATGTGGACTACAGGAACTACCTACACCAGTGG				2qC1.1	Mus musculus nebulin (Neb), mRNA.	Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils [goid 5865] [evidence TAS]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; Any process that controls the length of actin filaments in a cell [goid 30832] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	AI595938	AI595938
Mus musculus	RefSeq	ILMN_223009	ILMN_324458	3110003A17RIK	NM_028440.1	NM_028440.1		73112	153791467	NM_028440.1	3110003A17Rik	NP_082716.1	ILMN_1257234	006370707	S	675	GCTTTTGTTCTCTTAAACCATTCTTAAGACAATTTCTACAGGCACTTGAC				10qA3	Mus musculus RIKEN cDNA 3110003A17 gene (3110003A17Rik), mRNA.				MGC107537; 1700028I04Rik	MGC107537; 1700028I04Rik
Mus musculus	RefSeq	ILMN_223339	ILMN_223339	PIGM	NM_026234.3	NM_026234.3		67556	142373575	NM_026234.3	Pigm	NP_080510.1	ILMN_2762721	003360113	S	3781	AGTCATTTCCTCTTAGAGCAGAGCATCAGAGTGTCCTTTCCTAAGGCGCT	1	+	174310467-174310516	1qH3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class M (Pigm), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 30] [evidence ISO]	AI644422; 4933437L05Rik; AV302080	AI644422; 4933437L05Rik; AV302080
Mus musculus	RefSeq	ILMN_208766	ILMN_208766	POU6F1	NM_010127.3	NM_010127.3		19009	133892217	NM_010127.3	Pou6f1	NP_034257.1	ILMN_2589318	006040142	S	4393	TTGTGTTCTTGAAAAGCCAGTCACCTTCCTATTCCCAGGACGCCTTTCCT	15	-	100405881-100405930	15qF1	Mus musculus POU domain, class 6, transcription factor 1 (Pou6f1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	2310038G18Rik; C79593; Emb; Brn5.0	2310038G18Rik; C79593; Emb; Brn5.0
Mus musculus	RefSeq	ILMN_210833	ILMN_210833	MRPS25	NM_025578.4	NM_025578.4		64658	118130303	NM_025578.4	Mrps25	NP_079854.2	ILMN_2680111	006270020	S	1140	TGCCATCAAGTCCATGTGGTGGAGGAGTGCCAGTGGCATTGTGTTAACCG	6	-	92124392-92124441	6qD1	Mus musculus mitochondrial ribosomal protein S25 (Mrps25), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]		The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	2810429N01Rik; Rpms25	2810429N01Rik; Rpms25
Mus musculus	RefSeq	ILMN_202203	ILMN_210833	MRPS25	NM_025578.4	NM_025578.4		64658	118130303	NM_025578.4	Mrps25	NP_079854.2	ILMN_1239357	002760086	S	1711	ACACATCAGAGCTACAAGCATTCCATTGCAGCCCCTACCTGGTCTGCTGC	6	-	92123821-92123870	6qD1	Mus musculus mitochondrial ribosomal protein S25 (Mrps25), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]		The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	2810429N01Rik; Rpms25	2810429N01Rik; Rpms25
Mus musculus	RefSeq	ILMN_210833	ILMN_210833	MRPS25	NM_025578.4	NM_025578.4		64658	118130303	NM_025578.4	Mrps25	NP_079854.2	ILMN_1246044	004490450	S	306	GTCCTGGTAGACGTGGAGACGAAGAGTAATAAGGAGATCATGGAGCACAT	6	-	92125726-92125775	6qD1	Mus musculus mitochondrial ribosomal protein S25 (Mrps25), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]		The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	2810429N01Rik; Rpms25	2810429N01Rik; Rpms25
Mus musculus	RefSeq	ILMN_212737	ILMN_212737	SLC12A4	NM_009195.2	NM_009195.2		20498	133892389	NM_009195.2	Slc12a4	NP_033221.1	ILMN_2629731	005360072	S	3400	TGCAGTGGAAATGGATCCGAGGGCCCAGGGGACCCTGGTGGATTTAGGGA	8	-	108467790-108467839	8qD3	Mus musculus solute carrier family 12, member 4 (Slc12a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]	AW546649; RBCKCC1; KCC1	AW546649; RBCKCC1; KCC1
Mus musculus	MEEBO	ILMN_209392	ILMN_209392	COG8	scl097484.1_16	NM_139229.2			25453389	NM_139229.2	Cog8		ILMN_2595383	006510296	S	1957	GTGCAGTTGCTTTGCCCAGGATAGCGCGGGCCCTGTGGTATTTGCAGCTT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	Riken	ILMN_202568	ILMN_202568	3110009G19RIK	ri|3110009G19|ZX00070P24|AK014030|2200					AK014030	3110009G19Rik		ILMN_1217960	005080630	S	1841	CTGCCGCACTAGGACTGGGCAGTGAAAGGACACAGAAATGTGTGGCATGC										
Mus musculus	RefSeq	ILMN_216059	ILMN_216059	SSX9	NM_199063.2	NM_199063.2		382206	118130912	NM_199063.2	Ssx9	NP_951018.1	ILMN_2666812	006370646	S	390	GTATTCGTAATGTAGAAGAAAGACTTGCCTCTGGAGAGCATGATTCCAAC	X	+	8327784-8327833	XqA1.1	Mus musculus synovial sarcoma, X breakpoint 9 (Ssx9), mRNA.				Ssxb4	Ssxb4
Mus musculus	RefSeq	ILMN_201204	ILMN_309881	LOC100047984	XM_001479289.1	XM_001479289.1		100047984	149259589	XM_001479289.1	LOC100047984	XP_001479339.1	ILMN_1251979	007610717	S	328	CCAGCTCCGGACAGGCAGAGTCAACTTGCAACTGAGGAGATTCAGGGTCT					PREDICTED: Mus musculus similar to HVEC cell-cell adhesion molecule/herpesvirus receptor; HveC; PRR; PRR1; HigR; nectin-1 (LOC100047984), mRNA.					
Mus musculus	RefSeq	ILMN_217131	ILMN_217131	OLFR888	NM_146424.1	NM_146424.1		258416	33239241	NM_146424.1	Olfr888	NP_666635.1	ILMN_1241837	005390730	S	644	GTCTGACTGTTTTTATTTCTTACACGTTGATCCTTTCTAACATCCTCAGC	9	+	37916916-37916965	9qA4	Mus musculus olfactory receptor 888 (Olfr888), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR162-4	MOR162-4
Mus musculus	RefSeq	ILMN_187519	ILMN_209881	HIF1AN	NM_176958.3	NM_176958.3		319594	70909331	NM_176958.3	Hif1an	NP_795932.2	ILMN_1239154	001580452	S	5861	AACTGCCTGCCCTCTTCACCTAAAGTCTGTTCTCATTTCGGGGAGGAATG	19	+	44650435-44650484	19qC3	Mus musculus hypoxia-inducible factor 1, alpha subunit inhibitor (Hif1an), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence IEA]	2310046M24Rik; A830014H24Rik; FIH1	2310046M24Rik; A830014H24Rik; FIH1
Mus musculus	RefSeq	ILMN_209881	ILMN_209881	HIF1AN	NM_176958.3	NM_176958.3		319594	70909331	NM_176958.3	Hif1an	NP_795932.2	ILMN_2600104	001780075	S	613	CCTGCTCACTATGATGAGCAGCAGAACTTTTTTGCCCAAATAAAAGGCCA	19	+	44642836-44642885	19qC3	Mus musculus hypoxia-inducible factor 1, alpha subunit inhibitor (Hif1an), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence IEA]	2310046M24Rik; A830014H24Rik; FIH1	2310046M24Rik; A830014H24Rik; FIH1
Mus musculus	RefSeq	ILMN_210695	ILMN_210695	CDIPT	NM_138754.1	NM_138754.1		52858	21362276	NM_138754.1	Cdipt	NP_620093.1	ILMN_3101385	000520128	A	1365	AGGAGTCAGACTGATGTCATTGGACCTGGGGTACCAGGCTGGGGAGGGAA	7	+	126771175-126771224	7qF3	Mus musculus CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) (Cdipt), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Catalysis of the reaction: CDP-diacylglycerol + myo-inositol = CMP + phosphatidyl-1D-myo-inositol [goid 3881] [evidence IEA]	Pis; 9530042F15Rik; D7Bwg0575e; Pis1	Pis; 9530042F15Rik; D7Bwg0575e; Pis1
Mus musculus	RefSeq	ILMN_255308	ILMN_255308	EEF1D	NM_029663.1	NM_029663.1		66656	56699437	NM_029663.1	Eef1d	NP_083939.1	ILMN_3139168	006370561	A	2727	TTCCTGGATACCTGATACCCTCTTCTGGCCTCTGGGCATGCATATCTGCC	15	-	75725300-75725349	15qD3	Mus musculus eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) (Eef1d), transcript variant 1, mRNA.	A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	5730529A16Rik; AL023999; 1700026P12Rik	5730529A16Rik; AL023999; 1700026P12Rik
Mus musculus	RefSeq	ILMN_184992	ILMN_255308	EEF1D	NM_029663.1	NM_029663.1		66656	56699437	NM_029663.1	Eef1d	NP_083939.1	ILMN_2423292	006330440	S	482	TAGACAAGCCACTCTTCGACCAGGCAGAAAGCTCCTACCGTCAGAGGCTG	15	-	75733818-75733867	15qD3	Mus musculus eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) (Eef1d), transcript variant 1, mRNA.	A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	5730529A16Rik; AL023999; 1700026P12Rik	5730529A16Rik; AL023999; 1700026P12Rik
Mus musculus	RefSeq	ILMN_255308	ILMN_255308	EEF1D	NM_029663.1	NM_029663.1		66656	56699437	NM_029663.1	Eef1d	NP_083939.1	ILMN_3061673	003190059	I	996	TAACGTAGGAAACAAGAGAGCTGGGTCAAAACGGGCCAACGGGGAGGCTC	15	-	75733304-75733353	15qD3	Mus musculus eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) (Eef1d), transcript variant 1, mRNA.	A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	5730529A16Rik; AL023999; 1700026P12Rik	5730529A16Rik; AL023999; 1700026P12Rik
Mus musculus	MEEBO	ILMN_221269	ILMN_221269	3830408P06RIK	scl37638.35_614	XM_125867.4			38090651	XM_125867.4	3830408P06Rik		ILMN_1239456	003190414	S	3494	CAGCCATACTGGTGGGCCTAGTATCATTAAATGCTGTTTTCCCCAAGTTC										
Mus musculus	RefSeq	ILMN_222274	ILMN_222274	SLC35F1	NM_178675.3	NM_178675.3		215085	40254331	NM_178675.3	Slc35f1	NP_848790.2	ILMN_2747211	005890193	S	3920	GATCAGACATTAATGCACCTGTGTTGGTTTATCTCCATTCATGAAGCTGG	10	+	52830479-52830528	10qB3	Mus musculus solute carrier family 35, member F1 (Slc35f1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		E130016L02; Duf6	E130016L02; Duf6
Mus musculus	RefSeq	ILMN_199709	ILMN_226270	A130082M07RIK	XM_975896.1	XM_975896.1		279882	94397538	XM_975896.1	A130082M07Rik	XP_980990.1	ILMN_1228867	004260463	S	890	AAGAGACCAACGCCACCTACCCCAGTTCAGACGTTCCCTGTGATGCCACG				14qC2	PREDICTED: Mus musculus RIKEN cDNA A130082M07 gene (A130082M07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198892	ILMN_243786	2310061F22RIK	NM_153775.1	NM_153775.1		66965	24418873	NM_153775.1	2310061F22Rik	NP_722470.1	ILMN_1221168	003120348	S	1579	GCTGAGTCGTGCGGAGCCATGAAGCAGGAAGGCGAGGACAAAAGGATTGG	8	+	125005552-125005556:125005557-125005601	8qE1	Mus musculus RIKEN cDNA 2310061F22 gene (2310061F22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_243786	ILMN_243786	2310061F22RIK	NM_153775.1	NM_153775.1		66965	24418873	NM_153775.1	2310061F22Rik	NP_722470.1	ILMN_2860725	006520092	S	1134	ACAGTCAGCACCGTGTACAGGACGAGTGAGAAGCTGGTCAAAGCTCCCCG	8	+	125004115-125004134:125004802-125004831	8qE1	Mus musculus RIKEN cDNA 2310061F22 gene (2310061F22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198983	ILMN_198983	LAYN	XM_146887.7	XM_146887.7		244864	149259960	XM_146887.7	Layn	XP_146887.7	ILMN_1257873	000060431	S	936	CAAAGGAGCAGCACACCATTTGGCCCACTCCTCGCCAAGAAAACAGCCCC	9	-	50865685-50865734	9qA5.3	PREDICTED: Mus musculus layilin (Layn), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210708	ILMN_210708	SOX2	NM_011443.3	NM_011443.3		20674	127140985	NM_011443.3	Sox2	NP_035573.3	ILMN_1248711	001260100	S	2124	GCAGGTTGATATCGTTGGTAATTTATAATAGCTTTTGTTCAATCCTACCC	3	+	34551050-34551099	3qA3	Mus musculus SRY-box containing gene 2 (Sox2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a pigment, any general or particular coloring matter in living organisms, e.g. melanin [goid 46148] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The series of events involved in equilibrioception in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. During equilibrioception, mechanical stimuli may be in the form of input from pressure receptors or from the labyrinth system of the inner ears [goid 50973] [evidence IMP]; The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity [goid 30910] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway [goid 45747] [evidence IDA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IGI]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The process by which the anatomical structures of diencephalon are generated and organized. Morphogenesis pertains to the creation of form. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex [goid 48852] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain [goid 21879] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in man other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech [goid 43586] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form [goid 60042] [evidence IMP]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Sox-2; lcc; ysb	Sox-2; lcc; ysb
Mus musculus	RefSeq	ILMN_216067	ILMN_314665	RP23-357I14.1	NM_001085518.1	NM_001085518.1		381417	147901769	NM_001085518.1	Rp23-357i14.1	NP_001078987.1	ILMN_2666935	007100762	S	2762	ATTTTCCCTCTGTGGATTTGCCAATCTTAGTTCCATAGGAATCACACTGG				2qE5	Mus musculus novel protein similar to solute carrier family 28 (sodium-coupled nucleoside transporter) member 2 (Slc28a2) (Rp23-357i14.1), mRNA.					
Mus musculus	Riken	ILMN_205526	ILMN_205526	D130054H18RIK	ri|D130054H18|PX00185A13|AK051521|2865					AK051521	D130054H18Rik		ILMN_1221078	005960750	S	2711	CCAGCTTCAGAGACTGGGCTCAAATCACAAGGGATTGTGGCTAAGTGCCG										
Mus musculus	RefSeq	ILMN_210412	ILMN_256107	ADAM25	NM_011781.1	NM_011781.1		23793	6752969	NM_011781.1	Adam25	NP_035911.1	ILMN_2720372	002450041	S	2562	CAGTATGAAATACCTCATCATTCAATAAAGCTATGATCATAGTACGATCA	8	+	41841471-41841520	8qA4	Mus musculus a disintegrin and metallopeptidase domain 25 (testase 2) (Adam25), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence ISS]	4930529F22Rik	4930529F22Rik
Mus musculus	RefSeq	ILMN_210597	ILMN_210597	KCNE1	NM_008424.2	NM_008424.2		16509	31543033	NM_008424.2	Kcne1	NP_032450.1	ILMN_2921901	001430524	S	2704	AGAAGGAACCATGGGAGTGGAGCGGAGAGGGGGCACCAGAGCTGCAGTTG	16	-	92235261-92235310	16qC4	Mus musculus potassium voltage-gated channel, Isk-related subfamily, member 1 (Kcne1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2070] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	Isk; MinK; nmf190	Isk; MinK; nmf190
Mus musculus	RefSeq	ILMN_210597	ILMN_210597	KCNE1	NM_008424.2	NM_008424.2		16509	31543033	NM_008424.2	Kcne1	NP_032450.1	ILMN_2759207	002190112	S	584	TGTCGTGAACCCCACACCCTACAGGTGACAAGCGGATCTTTCTAGTCGCA	16	-	92237381-92237423:92237424-92237430	16qC4	Mus musculus potassium voltage-gated channel, Isk-related subfamily, member 1 (Kcne1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2070] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	Isk; MinK; nmf190	Isk; MinK; nmf190
Mus musculus	Riken	ILMN_202104	ILMN_202104	2810046L04RIK	ri|2810046L04|ZX00065F19|AK012908|943					AK012908	2810046L04Rik		ILMN_1229652	002350669	S	692	GGGAAGTCATTGTGGTACGGGAATTACGTTTGTACTACCTACAGCCCCGG										
Mus musculus	Riken	ILMN_202314	ILMN_202314	4833424P18RIK	ri|4833424P18|PX00028I07|AK014764|1506					AK014764	4833424P18Rik		ILMN_2548639	000510500	S	1308	GTGTGAGAATGACAGCTTACTCTTCACTGACACTTGCCAACAGGGAGCCG										
Mus musculus	MEEBO	ILMN_188396	ILMN_188396	1500012K07RIK	scl32526.3.1_9				51749649	XM_485949	1500012K07Rik		ILMN_2452328	007400360	S	7	TGTTCCATGAAGAAATGAAGACACAGTTCAAAGAATCTATACTCCATCCA										
Mus musculus	RefSeq	ILMN_210738	ILMN_210738	INDO	NM_008324.1	NM_008324.1		15930	6680346	NM_008324.1	Indo	NP_032350.1	ILMN_1223600	004670608	S	1274	GCTCTTCTGAGTTGGCCTTAGTGTAGCAAGCTCCACTTCTATCAGGGCAC	8	-	25694844-25694873:25694874-25694893	8qA2	Mus musculus indoleamine-pyrrole 2,3 dioxygenase (Indo), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction [goid 2666] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a chronic inflammatory response [goid 2678] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a T-helper 2 type immune response [goid 2830] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: tryptophan + O2 = N-formylkynurenine; includes both reactions D-tryptophan + O2 = N-formyl-D-kynurenine and L-tryptophan + O2 = N-formyl-L-kynurenine [goid 33754] [evidence IEA]; Catalysis of the reaction: L-tryptophan + O2 = N-formyl-L-kynurenine [goid 4833] [evidence IDA]	Ido	Ido
Mus musculus	RefSeq	ILMN_219373	ILMN_219373	PMS2	NM_008886.2	NM_008886.2		18861	121583909	NM_008886.2	Pms2	NP_032912.2	ILMN_2707947	004860768	S	2633	CTGACACACCCCTTGTAGCATAGAGTTTATTACAGATTGTTCGGTTTGCA	5	+	144692025-144692028:144692029-144692074	5qG2	Mus musculus postmeiotic segregation increased 2 (S. cerevisiae) (Pms2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MLH1 and PMS2 [goid 32389] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence TAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	AW555130; Pmsl2	AW555130; Pmsl2
Mus musculus	MEEBO	ILMN_216834	ILMN_216834	SRMS	scl020811.2_99	NM_011481.2			31981476	NM_011481.2	Srms		ILMN_1236717	006980452	S	2274	GCATAGAGGAGGAGCCGCAAGGATGTGCTTTGACAGACGAGAGCCAGCAG							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197743	ILMN_227623	7530428D23RIK	XM_887943.2	XM_887943.2		319506	94369445	XM_887943.2	7530428D23Rik	XP_893036.2	ILMN_2529214	000770768	S	436	ACAGGAGAAGAAAATAAGTTTCACTCAAAGATGTGCTGCTCAAGTAAAAT	3	-	21652681-21652730	3qA3	PREDICTED: Mus musculus RIKEN cDNA 7530428D23 gene (7530428D23Rik), mRNA.					
Mus musculus	MEEBO	ILMN_188383	ILMN_188383	C130027E04RIK	scl0102378.1_94						C130027E04Rik		ILMN_2452219	007650154	S	3	GCCATCTACTGCTGTCATGTGTACGTGTCTATTGCTGGGTCTCTAGTCTC										
Mus musculus	Riken	ILMN_206983	ILMN_206983	5031412K01RIK	ri|5031412K01|PX00642F03|AK077246|3281					AK077246	5031412K01Rik		ILMN_2584158	000940482	S	2723	AAACTGATATGAGACCCCCTGCGGTGGTAATGGCCCACAGGCTGAGAACC										
Mus musculus	RefSeq	ILMN_192575	ILMN_250060	PDIA6	NM_027959.3	NM_027959.3		71853	146141148	NM_027959.3	Pdia6	NP_082235.1	ILMN_2489360	000510739	S	1850	CGGAAACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGG				12qA1.1	Mus musculus protein disulfide isomerase associated 6 (Pdia6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [evidence IEA]	C77895; CaBP5; AL023058; Txndc7; P5; 1700015E05Rik	C77895; CaBP5; AL023058; Txndc7; P5; 1700015E05Rik
Mus musculus	Riken	ILMN_207037	ILMN_207037	5430400L16RIK	ri|5430400L16|PX00022G07|AK077369|1399					AK077369	5430400L16Rik		ILMN_2584566	003310603	S	1329	GGCAACAGACATGGGAAGGGGCGGGTGCTGAGGAAAGGTGACTGCTGTTT										
Mus musculus	MEEBO	ILMN_221424	ILMN_221424	OLFR1378	scl41604.1.1_221				22129068	NM_146910	Olfr1378		ILMN_2735408	001820564	S	779	GCACCCTTCGTCTACATATTCAGTACAGGACATGGTGGCCACTGCCTTTT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_202051	ILMN_212995	HBB-B1	NM_008220.3	NM_008220.3		15129	145386542	NM_008220.3	Hbb-b1	NP_032246.2	ILMN_1239117	004540333	S	78	GAAGGCTGCTGTCTCTGGCCTGTGGGGAAAGGTGAACGCCGATGAAGTTG				7qE3	Mus musculus hemoglobin, beta adult major chain (Hbb-b1), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IMP]	AA409645	AA409645
Mus musculus	RefSeq	ILMN_201953	ILMN_212995	HBB-B1	NM_008220.3	NM_008220.3		15129	145386542	NM_008220.3	Hbb-b1	NP_032246.2	ILMN_1236718	004290291	S	276	TGGCCTGAATCACTTGGACAGCCTCAAGGGCACCTTTGCCAGCCTCAGTG				7qE3	Mus musculus hemoglobin, beta adult major chain (Hbb-b1), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IMP]	AA409645	AA409645
Mus musculus	RefSeq	ILMN_202054	ILMN_212995	HBB-B1	NM_008220.3	NM_008220.3		15129	145386542	NM_008220.3	Hbb-b1	NP_032246.2	ILMN_1216452	006100671	S	209	CCTCTGCTATCATGGGTAATGCCAAAGTGAAGGCCCATGGCAAGAAAGTG				7qE3	Mus musculus hemoglobin, beta adult major chain (Hbb-b1), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IMP]	AA409645	AA409645
Mus musculus	RefSeq	ILMN_212995	ILMN_212995	HBB-B1	NM_008220.3	NM_008220.3		15129	145386542	NM_008220.3	Hbb-b1	NP_032246.2	ILMN_1235372	000670403	S	539	CCCCTAGAGAAAAACTGTCAATTGTGGGGAAATGATGAAGACCTTTGGGC				7qE3	Mus musculus hemoglobin, beta adult major chain (Hbb-b1), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IMP]	AA409645	AA409645
Mus musculus	RefSeq	ILMN_197245	ILMN_197245	LOC238678	XM_138664.2	XM_138664.2			38074759	XM_138664.2	LOC238678		ILMN_2527446	003940193	S	795	GTATGTGAGCGCACTCAAGTTGCTCTGTAGGCGCTTGGAAGTCTAGAGGT										
Mus musculus	MEEBO	ILMN_214777	ILMN_214777	6330513E13	scl0328993.4_96	NM_177831.2			31342905	NM_177831.2	6330513E13		ILMN_2651808	001050767	S	3191	AACATATCGCCGAGTACTTTAATGTCAGCTGGGCAACAGCTTCCGGCTGG										
Mus musculus	RefSeq	ILMN_227130	ILMN_227130	FBXL14	NM_133940.1	NM_133940.1		101358	19527157	NM_133940.1	Fbxl14	NP_598701.1	ILMN_2972232	002100224	S	2647	TTTAGAGTCCTCCACAGCAACATGAGAGACCATGGAGAAACCCAGAGACC	6	+	119448044-119448093	6qF1	Mus musculus F-box and leucine-rich repeat protein 14 (Fbxl14), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW322056; Fbx14l	AW322056; Fbx14l
Mus musculus	Riken	ILMN_203609	ILMN_203609	A930018M19RIK	ri|A930018M19|PX00066J08|AK044522|3954					AK044522	A930018M19Rik		ILMN_1212909	007570048	S	3531	GACAGCTTGGCTGTAGGAAACTCAGGCAGTTCTGCAAGAGGAGTTACTCT										
Mus musculus	RefSeq	ILMN_196952	ILMN_233964	LOC665914	XM_980320.1	XM_980320.1		665914	94392895	XM_980320.1	LOC665914	XP_985414.1	ILMN_1230229	002690382	S	444	GGAGAACGGAGTTCAGGCTTGGTGAATGAGACTGGGAAAGGACCGCACGA	12	+	68570972-68571021		PREDICTED: Mus musculus hypothetical protein LOC665914 (LOC665914), mRNA.					
Mus musculus	RefSeq	ILMN_209246	ILMN_209246	CORIN	NM_016869.2	NM_016869.2		53419	142374600	NM_016869.2	Corin	NP_058565.1	ILMN_1236136	004830148	S	4770	GTACTGCGGTCAGGACTATATGAAGGTTTAGGACCATCGGGTCGGTTTTG	5	-	72691307-72691356	5qC3.2	Mus musculus corin (Corin), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence ISO]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC118735; Lrp4; AV273130	MGC118735; Lrp4; AV273130
Mus musculus	RefSeq	ILMN_189288	ILMN_189288	VRK2	NM_027260.1	NM_027260.1		69922	21312467	NM_027260.1	Vrk2	NP_081536.1	ILMN_2943699	001850594	S	1130	AGAGCAAGGCAGAGAGAGGAGCAGGAAGACAGCCAGCCCACAATGCTGCA	11	-	26376571-26376620	11qA3.3	Mus musculus vaccinia related kinase 2 (Vrk2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	2810003O05Rik; AI447698	2810003O05Rik; AI447698
Mus musculus	MEEBO	ILMN_185379	ILMN_185379	9130017K11RIK	scl41399.2_540						9130017K11Rik		ILMN_2426561	000540070	S	14	GCACGGATTGGAAATCATGCCTTTTCAACGACAAGAAGAAGCCTAAGGGG								Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	Riken	ILMN_201885	ILMN_201885	4931413K05RIK	ri|4931413K05|PX00016F11|AK016454|1813					AK016454	4931413K05Rik		ILMN_1231995	001450372	S	1702	ACGACAGCGAGGGAAGTCTGCATGGGAAACACTTTGATCCCCCACCACTG										
Mus musculus	Riken	ILMN_203129	ILMN_203129	6430514E02RIK	ri|6430514E02|PX00045L03|AK032274|2683					AK032274	6430514E02Rik		ILMN_1249285	001440743	S	2238	GTGTTAGCACCCTCGCTCTCAGCTGTCCTTTGCCTTCCAGGTGTAGCACC										
Mus musculus	RefSeq	ILMN_220167	ILMN_220167	BCCIP	NM_025392.2	NM_025392.2		66165	134031956	NM_025392.2	Bccip	NP_079668.2	ILMN_2759920	005290053	S	867	GATGGTCCTTCGATGATGTTCCGATGACGCCTTTGCGGACTGTGATGGTA	7	+	140912451-140912500	7qF3	Mus musculus BRCA2 and CDKN1A interacting protein (Bccip), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Cyclin-dependent protein kinase (CDK) complex found in the nucleus [goid 19908] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence ISO]	Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19207] [evidence ISO]	TOK-1; 1110013J05Rik	TOK-1; 1110013J05Rik
Mus musculus	RefSeq	ILMN_220167	ILMN_220167	BCCIP	NM_025392.2	NM_025392.2		66165	134031956	NM_025392.2	Bccip	NP_079668.2	ILMN_2770003	003420309	S	894	CGCCTTTGCGGACTGTGATGGTAATTCCAGACGACAGGATGAATGAGATC	7	+	140912478-140912527	7qF3	Mus musculus BRCA2 and CDKN1A interacting protein (Bccip), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Cyclin-dependent protein kinase (CDK) complex found in the nucleus [goid 19908] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence ISO]	Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19207] [evidence ISO]	TOK-1; 1110013J05Rik	TOK-1; 1110013J05Rik
Mus musculus	RefSeq	ILMN_192662	ILMN_220167	BCCIP	NM_025392.2	NM_025392.2		66165	134031956	NM_025392.2	Bccip	NP_079668.2	ILMN_1255076	005900356	S	1110	AGACACATGGAACAGAACCCTACTTTTTGTAGAGGACTTGAATCTGAATA	7	+	140912694-140912743	7qF3	Mus musculus BRCA2 and CDKN1A interacting protein (Bccip), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Cyclin-dependent protein kinase (CDK) complex found in the nucleus [goid 19908] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence ISO]	Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19207] [evidence ISO]	TOK-1; 1110013J05Rik	TOK-1; 1110013J05Rik
Mus musculus	MEEBO	ILMN_185126	ILMN_185126	LUZP2	scl32613.12_18				34328456	NM_178705	Luzp2		ILMN_2440723	002810445	S	17	CACCTACTGAAGAACTTTACTGTAAGAATCTCAAGCAATCAGAATAGGAG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_208851	ILMN_208851	KCNH5	NM_172805.2	NM_172805.2		238271	142382566	NM_172805.2	Kcnh5	NP_766393.1	ILMN_1219743	005910538	S	3688	CCTCCCCAAATACCATGTCAGGATATTTTTAGTGTCTCAAGGCCTGAGTC	12	-	75998527-75998576	12qC3	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 5 (Kcnh5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	6430546I09	6430546I09
Mus musculus	RefSeq	ILMN_221103	ILMN_221103	CYP2B13	NM_007813.1	NM_007813.1		13089	6681104	NM_007813.1	Cyp2b13	NP_031839.1	ILMN_1214531	005360670	S	1592	TTGCTGCTCACATCTTTCCTCCTATTGTGGTTCTCCACAGCTGGAAGGTG	7	+	26880931-26880980	7qA3	Mus musculus cytochrome P450, family 2, subfamily b, polypeptide 13 (Cyp2b13), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217817	ILMN_217817	CLSTN2	NM_022319.2	NM_022319.2		64085	40254526	NM_022319.2	Clstn2	NP_071714.2	ILMN_1221423	002060594	S	3802	CAAAATGTATTTATTTGGTAACTATGCTATTGTGTGTGTATGAGTCTGAT	9	-	97345313-97345362	9qE3.3	Mus musculus calsyntenin 2 (Clstn2), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA4134; CSTN2; Cs2; mKIAA4134; Cst-2; AI448973; 2900042C18Rik	KIAA4134; CSTN2; Cs2; mKIAA4134; Cst-2; AI448973; 2900042C18Rik
Mus musculus	RefSeq	ILMN_210309	ILMN_210309	OLFR1086	NM_146592.1	NM_146592.1		258585	22129466	NM_146592.1	Olfr1086	NP_666803.1	ILMN_2945633	003290196	S	716	GTGGCTCACACCTAATGGCAGTGTCCACATTTCATGGCACTGTTCTTTTC	2	-	86516723-86516772	2qD	Mus musculus olfactory receptor 1086 (Olfr1086), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR179-2	MOR179-2
Mus musculus	RefSeq	ILMN_217092	ILMN_217092	NRIP3	NM_020610.1	NM_020610.1		78593	10181147	NM_020610.1	Nrip3	NP_065635.1	ILMN_2875404	000650553	S	3799	TCCCTCCTTCTGTTGCCAGGTCTTTCTGCATTAGCACTTTATCTGCTCAG	7	-	116902265-116902314	7qE3-qF1	Mus musculus nuclear receptor interacting protein 3 (Nrip3), mRNA.				D7H11orf14; ICRFP703B1614Q5.2; A330103B05Rik	D7H11orf14; ICRFP703B1614Q5.2; A330103B05Rik
Mus musculus	RefSeq	ILMN_216978	ILMN_216978	ARF5	NM_007480.1	NM_007480.1		11844	6680721	NM_007480.1	Arf5	NP_031506.1	ILMN_2677712	001570398	S	129	CGGCTGGCAAGACTACCATCCTGTACAAACTGAAGTTGGGGGAGATTGTC	6	+	28374302-28374351	6qA3.3	Mus musculus ADP-ribosylation factor 5 (Arf5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence TAS]		
Mus musculus	RefSeq	ILMN_210076	ILMN_210076	SEMA7A	NM_011352.2	NM_011352.2		20361	40254572	NM_011352.2	Sema7a	NP_035482.1	ILMN_2601974	002570288	S	2539	CGGACGGAAGGGCGGGAAAAGCTCTATTTTTATGTTAGGCTTATTTCATG	9	+	57809936-57809985	9qB	Mus musculus sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A (Sema7a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		M-Sema-L; 2900057C09Rik; H-Sema-L; CDw108; Semal	M-Sema-L; 2900057C09Rik; H-Sema-L; CDw108; Semal
Mus musculus	RefSeq	ILMN_210076	ILMN_210076	SEMA7A	NM_011352.2	NM_011352.2		20361	40254572	NM_011352.2	Sema7a	NP_035482.1	ILMN_2790357	000780554	S	3128	GTCCATAGATTTCAGCAGAGAGCTGACCCTTCTCCAGCTGTGTCTGGGGC	9	+	57810525-57810574	9qB	Mus musculus sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A (Sema7a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		M-Sema-L; 2900057C09Rik; H-Sema-L; CDw108; Semal	M-Sema-L; 2900057C09Rik; H-Sema-L; CDw108; Semal
Mus musculus	RefSeq	ILMN_210076	ILMN_210076	SEMA7A	NM_011352.2	NM_011352.2		20361	40254572	NM_011352.2	Sema7a	NP_035482.1	ILMN_2666526	000840204	S	2485	GCCTGGGTCCCACCGGACAGCGCCTTGCATGTTTATTGAAGGATGTTTGC	9	+	57809882-57809931	9qB	Mus musculus sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A (Sema7a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		M-Sema-L; 2900057C09Rik; H-Sema-L; CDw108; Semal	M-Sema-L; 2900057C09Rik; H-Sema-L; CDw108; Semal
Mus musculus	RefSeq	ILMN_213107	ILMN_213107	SLC7A12	NM_080852.2	NM_080852.2		140918	142366209	NM_080852.2	Slc7a12	NP_543128.1	ILMN_2633726	005310041	S	1409	CCTTAATGGACATGCTACTTGTTTTGACACAATCACTTGCTACTGCCAAT	3	+	14505498-14505547	3qA1	Mus musculus solute carrier family 7 (cationic amino acid transporter, y+ system), member 12 (Slc7a12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IDA]	Asc-2; XAT1	Asc-2; XAT1
Mus musculus	RefSeq	ILMN_187783	ILMN_238009	HIST1H3D	NM_178204.1	NM_178204.1		319149	30061336	NM_178204.1	Hist1h3d	NP_835511.1	ILMN_2729958	004890382	S	302	TCGTGGGTCTGTTTGAGGACACCAACCTGTGTGCCATCCACGCCAAGCGT	13	+	23667972-23668021	13qA3.1	Mus musculus histone cluster 1, H3d (Hist1h3d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H3-b	H3-b
Mus musculus	RefSeq	ILMN_255658	ILMN_255658	E330034G19RIK	NM_001033214.1	NM_001033214.1		105418	85701715	NM_001033214.1	E330034G19Rik	NP_001028386.1	ILMN_2825118	000060092	S	1204	ACTCCCCTTGAGAGAACTGAGGTGACTACCCTGTCACTGTGTCCAAGACC	14	+	23142136-23142185	14qA3	Mus musculus RIKEN cDNA E330034G19 gene (E330034G19Rik), mRNA.				AA415275	AA415275
Mus musculus	RefSeq	ILMN_199782	ILMN_199782	LOC383926	XM_357328.1	XM_357328.1			38077297	XM_357328.1	LOC383926		ILMN_1244877	005340082	S	57	GGTGACGACATGTCCACCTCGAGAAGACAATGACCGTGGCTCATCGTGGA										
Mus musculus	RefSeq	ILMN_253053	ILMN_253053	SPRY3	NM_001030293.2	NM_001030293.2		236576	84490380	NM_001030293.2	Spry3	NP_001025464.1	ILMN_2869082	007560202	S	4104	CTGCATCTGGTTTACATAGAGATGGGTCCTGTTGAGGTATGCACACAGAC	X|NT_165789.2	-	101547-101596		Mus musculus sprouty homolog 3 (Drosophila) (Spry3), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gm391; sprouty3; Gm1409	Gm391; sprouty3; Gm1409
Mus musculus	Riken	ILMN_202912	ILMN_202912	SEMA4B	ri|4732467N09|PX00051B09|AK028896|2777					AK028896	Sema4b		ILMN_1223978	005550301	S	2403	GCCTAGGATATAGTGGTGGATGCTTAGAAGAAGATGGGGTGGCCAGGACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]			
Mus musculus	RefSeq	ILMN_214978	ILMN_231551	OLFR691	NM_147061.1	NM_147061.1		259063	22128836	NM_147061.1	Olfr691	NP_667272.1	ILMN_1225404	005670022	S	788	CCCATCGCTTTGGGAGAAACATTCCCCGACACGTGCATATCCTGCTGGCC	7	-	112485391-112485440	7qE3	Mus musculus olfactory receptor 691 (Olfr691), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR31-6	MOR31-6
Mus musculus	Riken	ILMN_203240	ILMN_203240	C330001H22RIK	ri|C330001H22|PX00075K03|AK049105|1524					AK049105	C330001H22Rik		ILMN_1258418	004150709	S	599	CGATGAATGTGGGTAGGAGGACTTAACATTCACTCACCCTGCGCCTCCGC										
Mus musculus	RefSeq	ILMN_185784	ILMN_185784	IFT122	NM_031177.2	NM_031177.2		81896	141802332	NM_031177.2	Ift122	NP_112454.1	ILMN_2429970	002650288	S	3741	CCCAGACTGTTGGGAGAAGGAATTAAACCCTCAGAACACGTCTCCTGCCC	6	+	115876391-115876440	6qE3	Mus musculus intraflagellar transport 122 homolog (Chlamydomonas) (Ift122), mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]			Wdr10; C86139	Wdr10; C86139
Mus musculus	RefSeq	ILMN_216598	ILMN_216598	MRPS24	NM_026080.2	NM_026080.2		64660	117940056	NM_026080.2	Mrps24	NP_080356.1	ILMN_2673024	004070543	S	606	CTCTGAGGTGGAGGCGTCAGCTCCAAGCTGCTGTTGAATAAAACCCTGAT	11	-	5604337-5604386	11qA1	Mus musculus mitochondrial ribosomal protein S24 (Mrps24), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]		The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	3110030K20Rik; Rpms24; AI414579	3110030K20Rik; Rpms24; AI414579
Mus musculus	RefSeq	ILMN_215840	ILMN_215840	BPIL1	NM_025631.2	NM_025631.2		66557	142380515	NM_025631.2	Bpil1	NP_079907.1	ILMN_2664244	003840369	S	1515	GACAGAGCCGCATCAAGTCATCATCAGCAAGTCAGCCAGCCTGTTTGGTC	2	+	153720819-153720868	2qH1	Mus musculus bactericidal/permeability-increasing protein-like 1 (Bpil1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	RYSR; MGC144837; 2310034L21Rik; LPLUNC2; AV089125; MGC144836; 2310069A01Rik	RYSR; MGC144837; 2310034L21Rik; LPLUNC2; AV089125; MGC144836; 2310069A01Rik
Mus musculus	RefSeq	ILMN_261170	ILMN_261170	KCNJ14	NM_145963.1	NM_145963.1		211480	22122398	NM_145963.1	Kcnj14	NP_666075.1	ILMN_2898924	001470039	S	2486	GGACGATCACAGAGCTAACGAATGGAAAAGGGAAGGAAGAGGCTGAGGCC	7	-	45684612-45684661	7qB4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 14 (Kcnj14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]	MGC38951; A930026G01Rik; MGC25490; Kir2.4; IRK4	MGC38951; A930026G01Rik; MGC25490; Kir2.4; IRK4
Mus musculus	RefSeq	ILMN_220742	ILMN_220742	SS18L1	NM_178750.4	NM_178750.4		269397	34328462	NM_178750.4	Ss18l1	NP_848865.3	ILMN_2726162	006960367	S	2248	CCGAGCTGCTTGTGTGTAGTATGGCTTTGGCCCTTGGCGTCATCTCTAGG	2	+	179802811-179802860	2qH4	Mus musculus synovial sarcoma translocation gene on chromosome 18-like 1 (Ss18l1), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	A230053O16Rik; CREST	A230053O16Rik; CREST
Mus musculus	RefSeq	ILMN_220742	ILMN_220742	SS18L1	NM_178750.4	NM_178750.4		269397	34328462	NM_178750.4	Ss18l1	NP_848865.3	ILMN_2991263	007400373	S	4148	CTTAGCATATAGCACAGTGGGAGATGGGAGATGTCCGCAGAGGCACTGGG	2	+	179804711-179804760	2qH4	Mus musculus synovial sarcoma translocation gene on chromosome 18-like 1 (Ss18l1), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	A230053O16Rik; CREST	A230053O16Rik; CREST
Mus musculus	RefSeq	ILMN_220742	ILMN_220742	SS18L1	NM_178750.4	NM_178750.4		269397	34328462	NM_178750.4	Ss18l1	NP_848865.3	ILMN_2726159	002850615	S	2240	GCTGTCTCCGAGCTGCTTGTGTGTAGTATGGCTTTGGCCCTTGGCGTCAT	2	+	179802803-179802852	2qH4	Mus musculus synovial sarcoma translocation gene on chromosome 18-like 1 (Ss18l1), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	A230053O16Rik; CREST	A230053O16Rik; CREST
Mus musculus	RefSeq	ILMN_213283	ILMN_213283	NKX6-2	NM_183248.2	NM_183248.2		14912	76443674	NM_183248.2	Nkx6-2	NP_899071.2	ILMN_2635578	004120575	S	1832	CTCGCGCCTCCGCCCCATCCAGGAACTGTAGTGTTCAGAAGTAAATCAAT	7	-	146765296-146765345	7qF4	Mus musculus NK6 homeobox 2 (Nkx6-2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results the commitment of a cell to become a motor neuron in the ventral spinal cord [goid 21912] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of glia cell differentiation [goid 45686] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of glia cell differentiation [goid 45687] [evidence IGI]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IGI]; Any process that stops, prevents or reduces the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 10454] [evidence IMP]; Any process that activates, maintains or increases the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 10455] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in the commitment of a cell to become an interneuron in the ventral spinal cord [goid 21913] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system [goid 48709] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Nkx6.2; Gtx	Nkx6.2; Gtx
Mus musculus	RefSeq	ILMN_213283	ILMN_213283	NKX6-2	NM_183248.2	NM_183248.2		14912	76443674	NM_183248.2	Nkx6-2	NP_899071.2	ILMN_2765101	005900563	S	1744	CAAGCAGCGACCATGGCAGTCACAGACCCGACCCTGGCATCAAGGACACA	7	-	146765384-146765433	7qF4	Mus musculus NK6 homeobox 2 (Nkx6-2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results the commitment of a cell to become a motor neuron in the ventral spinal cord [goid 21912] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of glia cell differentiation [goid 45686] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of glia cell differentiation [goid 45687] [evidence IGI]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IGI]; Any process that stops, prevents or reduces the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 10454] [evidence IMP]; Any process that activates, maintains or increases the frequency or rate of cell fate commitment. Cell fate commitment is the commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 10455] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in the commitment of a cell to become an interneuron in the ventral spinal cord [goid 21913] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system [goid 48709] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Nkx6.2; Gtx	Nkx6.2; Gtx
Mus musculus	MEEBO	ILMN_190892	ILMN_190892	5830468K18RIK	scl16057.16_35				27369927	NM_172644	5830468K18Rik		ILMN_2688721	001660209	S	2280	AGGGTTAGACAGACTGGTATGTCTTGTCACGGGAGCACCCAGCATCAGAG										
Mus musculus	RefSeq	ILMN_197508	ILMN_197508	LOC380910	XM_354822.1	XM_354822.1			38076352	XM_354822.1	LOC380910		ILMN_1250277	002260286	S	320	GAGGATTTGAACTACAGGTGTGATCATGAAATCCCACAGATATCAGACCC										
Mus musculus	RefSeq	ILMN_187436	ILMN_319314	LOC100041797	XM_001477560.1	XM_001477560.1		100041797	149254126	XM_001477560.1	LOC100041797	XP_001477610.1	ILMN_2444121	002490326	S	253	CACAGCAGCTTGAGTGGGACTGCTCCGCTGTCCTCATGAGAGAACGCTTT	5	-	100858147-100858196	5qE4	PREDICTED: Mus musculus hypothetical protein LOC100041797 (LOC100041797), mRNA.					
Mus musculus	RefSeq	ILMN_206399	ILMN_238500	CABP5	XM_982597.1	XM_982597.1		29865	94379621	XM_982597.1	Cabp5	XP_987691.1	ILMN_1217946	006040020	S	1173	CTTCAAGGAAACAAGCCAACAACACCCCTTTGTCAAGAATCTCCCCTCTC				7qA1	PREDICTED: Mus musculus calcium binding protein 5, transcript variant 2 (Cabp5), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198014	ILMN_198014	LOC272730	XM_195328.3	XM_195328.3			38080314	XM_195328.3	LOC272730		ILMN_2530174	007200220	S	1181	TCCAGATGAATCAGGTCCTAGGGTGCTTGATGACACCCTTGAAGACCCTC										
Mus musculus	RefSeq	ILMN_208626	ILMN_208626	NOSIP	NM_025533.2	NM_025533.2		66394	141801495	NM_025533.2	Nosip	NP_079809.1	ILMN_1225133	001260458	S	241	GAGGGAAGCGATCCTGGAGTACATCCTGCACCAGAAGAGAGAGATCGCCC	7	+	52329996-52330045	7qB4	Mus musculus nitric oxide synthase interacting protein (Nosip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	CGI-25; 2310061K06Rik; MGC115777	CGI-25; 2310061K06Rik; MGC115777
Mus musculus	RefSeq	ILMN_208626	ILMN_208626	NOSIP	NM_025533.2	NM_025533.2		66394	141801495	NM_025533.2	Nosip	NP_079809.1	ILMN_2621588	003420477	S	797	GAGAAACTGATCCGGAAGGACATGGTGGACCCCGTGAATGGGGACACGCT	7	+	52332218-52332267	7qB4	Mus musculus nitric oxide synthase interacting protein (Nosip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	CGI-25; 2310061K06Rik; MGC115777	CGI-25; 2310061K06Rik; MGC115777
Mus musculus	RefSeq	ILMN_208660	ILMN_208660	RBPJ	NM_009035.4	NM_009035.4		19664	124301228	NM_009035.4	Rbpj	NP_033061.3	ILMN_2648536	000580619	S	197	TAACCGGAGCGCTCCCCATGGACTACTCGGAGGGCTTGTCCGCGGAGGAG	5	+	53981650-53981699	5qC1	Mus musculus recombination signal binding protein for immunoglobulin kappa J region (Rbpj), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; The process controlling the timing and/or rate at which relatively unspecialized cells acquire specialized features [goid 48505] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into an epidermal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 9957] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a hair follicle to attain its fully functional state [goid 48820] [evidence IMP]; The process whose specific outcome is the progression of the sebaceous gland over time, from its formation to the mature structure [goid 48733] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]	RBP-J; Rbpsuh; RBPjk; CBF1; AI843960; Igkjrb; Igkrsbp	RBP-J; Rbpsuh; RBPjk; CBF1; AI843960; Igkjrb; Igkrsbp
Mus musculus	RefSeq	ILMN_208660	ILMN_208660	RBPJ	NM_009035.4	NM_009035.4		19664	124301228	NM_009035.4	Rbpj	NP_033061.3	ILMN_2772508	006770291	S	3972	ACTTTTTAAAATGCTTATATCTCATTTCGGTTCTTTTGTTTATTTTAGTA	5	+	54047115-54047164	5qC1	Mus musculus recombination signal binding protein for immunoglobulin kappa J region (Rbpj), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; The process controlling the timing and/or rate at which relatively unspecialized cells acquire specialized features [goid 48505] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into an epidermal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 9957] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a hair follicle to attain its fully functional state [goid 48820] [evidence IMP]; The process whose specific outcome is the progression of the sebaceous gland over time, from its formation to the mature structure [goid 48733] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]	RBP-J; Rbpsuh; RBPjk; CBF1; AI843960; Igkjrb; Igkrsbp	RBP-J; Rbpsuh; RBPjk; CBF1; AI843960; Igkjrb; Igkrsbp
Mus musculus	RefSeq	ILMN_208660	ILMN_208660	RBPJ	NM_009035.4	NM_009035.4		19664	124301228	NM_009035.4	Rbpj	NP_033061.3	ILMN_2588315	004390056	S	218	ACTACTCGGAGGGCTTGTCCGCGGAGGAGCGGCCTGCGCATGCTCCATCG	5	+	53981671-53981720	5qC1	Mus musculus recombination signal binding protein for immunoglobulin kappa J region (Rbpj), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; The process controlling the timing and/or rate at which relatively unspecialized cells acquire specialized features [goid 48505] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into an epidermal cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 9957] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a hair follicle to attain its fully functional state [goid 48820] [evidence IMP]; The process whose specific outcome is the progression of the sebaceous gland over time, from its formation to the mature structure [goid 48733] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]	RBP-J; Rbpsuh; RBPjk; CBF1; AI843960; Igkjrb; Igkrsbp	RBP-J; Rbpsuh; RBPjk; CBF1; AI843960; Igkjrb; Igkrsbp
Mus musculus	MEEBO	ILMN_217086	ILMN_217086	9630020C08RIK	scl37505.5.1_32	NM_177797.2			31342996	NM_177797.2	9630020C08Rik		ILMN_2678939	000050327	S	1229	ATAAGCATAGTGTTTTGGGTGTTCTTCAGGACGGTCAGTGTACGCATATG										
Mus musculus	RefSeq	ILMN_211894	ILMN_211894	MLX	NM_011550.2	NM_011550.2		21428	31560536	NM_011550.2	Mlx	NP_035680.2	ILMN_2620517	001710296	S	1609	TTTTTGTTATATGCAGTTTCCCAAACTTCTTAGCAGACCTCCAAAGCAGC	11	+	100953175-100953224	11qD	Mus musculus MAX-like protein X (Mlx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tcfl4	Tcfl4
Mus musculus	RefSeq	ILMN_190453	ILMN_211894	MLX	NM_011550.2	NM_011550.2		21428	31560536	NM_011550.2	Mlx	NP_035680.2	ILMN_1252018	005090047	S	1661	GGGCTGCTTTGGAGGTCTGCTAAGAAGTTTGGGAAACTGCATATAACAAA	11	+	100953227-100953276	11qD	Mus musculus MAX-like protein X (Mlx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tcfl4	Tcfl4
Mus musculus	RefSeq	ILMN_211894	ILMN_211894	MLX	NM_011550.2	NM_011550.2		21428	31560536	NM_011550.2	Mlx	NP_035680.2	ILMN_2620510	004850440	S	1611	TTTTGTTATATGCAGTTTCCCAAACTTCTTAGCAGACCTCCAAAGCAGCC	11	+	100953177-100953226	11qD	Mus musculus MAX-like protein X (Mlx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tcfl4	Tcfl4
Mus musculus	RefSeq	ILMN_237118	ILMN_237118	RLBP1L1	NM_028940.1	NM_028940.1		74438	58037378	NM_028940.1	Rlbp1l1	NP_083216.1	ILMN_3063835	003190040	I	1109	CCTTACGACATGGGGACTTGGGCCCGGACATTACTTGGCCCTGACTACAG	4	+	9356974-9357023	4qA1	Mus musculus retinaldehyde binding protein 1-like 1 (Rlbp1l1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	4933402J24Rik; RP23-152A20.1	4933402J24Rik; RP23-152A20.1
Mus musculus	RefSeq	ILMN_237118	ILMN_237118	RLBP1L1	NM_028940.1	NM_028940.1		74438	58037378	NM_028940.1	Rlbp1l1	NP_083216.1	ILMN_3141565	001070450	A	626	CCCGGGATTAAGAGGGCTTTGATCGACGGATTCCCCGGAGTGCTGGAAAA	4	+	9209050-9209099	4qA1	Mus musculus retinaldehyde binding protein 1-like 1 (Rlbp1l1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	4933402J24Rik; RP23-152A20.1	4933402J24Rik; RP23-152A20.1
Mus musculus	RefSeq	ILMN_192957	ILMN_237118	RLBP1L1	NM_028940.1	NM_028940.1		74438	58037378	NM_028940.1	Rlbp1l1	NP_083216.1	ILMN_1238740	001070221	S	2395	GCCCCCATGCATAGGAAGTCAGACAGAGAACAGCAAAGGGGAGGATATTT	4	+	9377674-9377723	4qA1	Mus musculus retinaldehyde binding protein 1-like 1 (Rlbp1l1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	4933402J24Rik; RP23-152A20.1	4933402J24Rik; RP23-152A20.1
Mus musculus	RefSeq	ILMN_194732	ILMN_251582	RBM11	NM_198302.2	NM_198302.2		224344	100817672	NM_198302.2	Rbm11	NP_938044.1	ILMN_2509097	002970048	S	2448	GACTGCTAAGAGAGTCGATTTTACTGTGGTGTCTTTTGTTAAAGACCAGG	16	+	75602819-75602868	16qC3.1	Mus musculus RNA binding motif protein 11 (Rbm11), mRNA.				A330018F01	A330018F01
Mus musculus	RefSeq	ILMN_194732	ILMN_251582	RBM11	NM_198302.2	NM_198302.2		224344	100817672	NM_198302.2	Rbm11	NP_938044.1	ILMN_2700338	002510441	S	1449	AGTGGCTGTGTGAATTGCTGCGATGACCAAGTGTACAGAATGATGCCGCA	16	+	75601820-75601869	16qC3.1	Mus musculus RNA binding motif protein 11 (Rbm11), mRNA.				A330018F01	A330018F01
Mus musculus	RefSeq	ILMN_198582	ILMN_198582	GM364	XM_141763.7	XM_141763.7		245423	149271641	XM_141763.7	Gm364	XP_141763.7	ILMN_1241207	001710605	S	1435	GGCTCACCAGCTGCTATCTCCTTTTGTACACTGGCAAGCCTCTTTGCACT	X	+	54716307-54716356	XqA5	PREDICTED: Mus musculus gene model 364, (NCBI) (Gm364), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_195188	ILMN_239533	LIX1	NM_025681.2	NM_025681.2		66643	118403301	NM_025681.2	Lix1	NP_079957.2	ILMN_2738146	006370433	S	1273	CCTACTTCATGTATGTTTTCAACCATTCCCTTAGGGATTCTACTTCAGAA	17	+	17594522-17594571	17qA3.2	Mus musculus limb expression 1 homolog (chicken) (Lix1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730466L18Rik	5730466L18Rik
Mus musculus	RefSeq	ILMN_195188	ILMN_239533	LIX1	NM_025681.2	NM_025681.2		66643	118403301	NM_025681.2	Lix1	NP_079957.2	ILMN_1247897	001030324	S	248	GGCAGACTCGAGATGGACAGAACCTTGGAATCTCTGAGGCACATCATTGC	17	+	17539897-17539908:17539909-17539946	17qA3.2	Mus musculus limb expression 1 homolog (chicken) (Lix1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730466L18Rik	5730466L18Rik
Mus musculus	RefSeq	ILMN_195188	ILMN_239533	LIX1	NM_025681.2	NM_025681.2		66643	118403301	NM_025681.2	Lix1	NP_079957.2	ILMN_2686594	006330450	S	550	GGCGCTCATCAACTCTCTCTTCAATGAGCTACCCTCCCGAAGGATCACCA	17	+	17580656-17580705	17qA3.2	Mus musculus limb expression 1 homolog (chicken) (Lix1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5730466L18Rik	5730466L18Rik
Mus musculus	RefSeq	ILMN_216068	ILMN_216068	NR4A3	NM_015743.2	NM_015743.2		18124	118131008	NM_015743.2	Nr4a3	NP_056558.1	ILMN_1233670	004260731	S	1501	GTCCTGCATCGACTTCAGTGCCTTCGAGGATTTGGGGAGTGGCTCGACTC	4	+	48083905-48083954	4qB1	Mus musculus nuclear receptor subfamily 4, group A, member 3 (Nr4a3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The process by which the anatomical structures of the semicircular canals are generated and organized. Morphogenesis pertains to the creation of form [goid 48752] [evidence IMP]; A reflex process by which a response to an angular or linear acceleration stimulus begins with an afferent nerve impulse from a receptor in the inner ear and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness [goid 60005] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	AI573420; CHN; CSMF; TEC; Nor1; NOR-1; MINOR	AI573420; CHN; CSMF; TEC; Nor1; NOR-1; MINOR
Mus musculus	RefSeq	ILMN_216068	ILMN_216068	NR4A3	NM_015743.2	NM_015743.2		18124	118131008	NM_015743.2	Nr4a3	NP_056558.1	ILMN_2666945	003840010	S	1658	CAAAGAGAGTGGAGGAGCTATGCACCAAGATCACAAGCAGCTTAAAGGAC	4	+	48095998-48096047	4qB1	Mus musculus nuclear receptor subfamily 4, group A, member 3 (Nr4a3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The process by which the anatomical structures of the semicircular canals are generated and organized. Morphogenesis pertains to the creation of form [goid 48752] [evidence IMP]; A reflex process by which a response to an angular or linear acceleration stimulus begins with an afferent nerve impulse from a receptor in the inner ear and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness [goid 60005] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	AI573420; CHN; CSMF; TEC; Nor1; NOR-1; MINOR	AI573420; CHN; CSMF; TEC; Nor1; NOR-1; MINOR
Mus musculus	RefSeq	ILMN_216068	ILMN_216068	NR4A3	NM_015743.2	NM_015743.2		18124	118131008	NM_015743.2	Nr4a3	NP_056558.1	ILMN_1257794	001990255	S	1818	GCTAGAGGACTTGGTACCTCCACCTTCTGTCATCGACAAGCTCTTCCTTG	4	+	48096158-48096207	4qB1	Mus musculus nuclear receptor subfamily 4, group A, member 3 (Nr4a3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The process by which the anatomical structures of the semicircular canals are generated and organized. Morphogenesis pertains to the creation of form [goid 48752] [evidence IMP]; A reflex process by which a response to an angular or linear acceleration stimulus begins with an afferent nerve impulse from a receptor in the inner ear and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness [goid 60005] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	AI573420; CHN; CSMF; TEC; Nor1; NOR-1; MINOR	AI573420; CHN; CSMF; TEC; Nor1; NOR-1; MINOR
Mus musculus	RefSeq	ILMN_199765	ILMN_199765	LOC383908	XM_357318.1	XM_357318.1			38076977	XM_357318.1	LOC383908		ILMN_1240767	005560132	S	60	TACAGTGTCCAAGGCGGCGTCAGCGGTTACCACAAGAATTGCTATGACCA										
Mus musculus	RefSeq	ILMN_209779	ILMN_209779	PPIL3	NM_027374.2	NM_027374.2		70225	141802141	NM_027374.2	Ppil3	NP_081650.1	ILMN_1232255	003390747	S	907	CCCTGATCAGATCCGAGGAGCTGTTTGGCAGCTCTTGCTTAATTATGCGT	1	-	58490735-58490784	1qC1.3	Mus musculus peptidylprolyl isomerase (cyclophilin)-like 3 (Ppil3), transcript variant 2, mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	2310076N22Rik; 2510026K04Rik; Cyp10l	2310076N22Rik; 2510026K04Rik; Cyp10l
Mus musculus	RefSeq	ILMN_215870	ILMN_242524	SKINT10	NM_177668.2	NM_177668.2		230613	126157500	NM_177668.2	Skint10	NP_808336.1	ILMN_2664619	004490259	S	1145	AAATTTATATCTATGAAACATACAATCAAGGGGATCTTCTGATTACATTT	4	-	112383969-112384018	4qD1	Mus musculus selection and upkeep of intraepithelial T cells 10 (Skint10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm570; RP23-170H12.3	Gm570; RP23-170H12.3
Mus musculus	RefSeq	ILMN_190492	ILMN_233191	RBM4B	NM_025717.3	NM_025717.3		66704	70909366	NM_025717.3	Rbm4b	NP_079993.2	ILMN_1220793	002340670	S	1736	CGTGGTACAGCATTTGCTGAAATTTAGCCTTGTTTTATTCCACTCCTCCC	19	+	4765847-4765896	19qA	Mus musculus RNA binding motif protein 4B (Rbm4b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	4921506I22Rik; AI504630; AI506404; Lark2; MGC115931	4921506I22Rik; AI504630; AI506404; Lark2; MGC115931
Mus musculus	RefSeq	ILMN_218601	ILMN_226104	D7ERTD443E	NM_001081331.1	NM_001081331.1		71007	124486742	NM_001081331.1	D7Ertd443e	NP_001074800.1	ILMN_1255809	006020332	S	2133	GATGAACCATTACATTTAACACTATCTCCACACGTGCAAGACACCTTTAC	7	-	141458187-141458236	7qF3	Mus musculus DNA segment, Chr 7, ERATO Doi 443, expressed (D7Ertd443e), mRNA.				Gm497	Gm497
Mus musculus	RefSeq	ILMN_226104	ILMN_226104	D7ERTD443E	NM_001081331.1	NM_001081331.1		71007	124486742	NM_001081331.1	D7Ertd443e	NP_001074800.1	ILMN_3059772	001740075	I	1013	GGTCACTGGAAGGAGAGCCCAGCATTGGTGCCAGTACATTTGGGGAGTGG	7	-	141540561-141540610	7qF3	Mus musculus DNA segment, Chr 7, ERATO Doi 443, expressed (D7Ertd443e), mRNA.				Gm497	Gm497
Mus musculus	RefSeq	ILMN_215571	ILMN_226155	OLFR1101	NM_146591.2	NM_146591.2		258584	113195673	NM_146591.2	Olfr1101	NP_666802.2	ILMN_2772747	000620458	S	646	AGTTTTATCCTGTTTGCTATCTTGAAGATGCATTCTGCTGAGGGGAGGCA	2	-	86828636-86828685	2qD	Mus musculus olfactory receptor 1101 (Olfr1101), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR179-3	MOR179-3
Mus musculus	RefSeq	ILMN_214447	ILMN_214447	RNF151	NM_026205.3	NM_026205.3		67504	118129829	NM_026205.3	Rnf151	NP_080481.1	ILMN_2648122	003190192	S	1115	CTACCAGACTTAATAGCTTCCTAGCTGGTACTACAAATGACTCAAAATCC	17	-	24852808-24852857	17qA3.3	Mus musculus ring finger protein 151 (Rnf151), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1700010O16Rik; AV047371	1700010O16Rik; AV047371
Mus musculus	RefSeq	ILMN_225633	ILMN_225633	IER5L	NM_030244.3	NM_030244.3		72500	119508419	NM_030244.3	Ier5l	NP_084520.3	ILMN_2961005	004900053	S	1498	CTGGCCACTCGGGGCTGAGCTGGGGACGAGCAGAGGCTGATGTTTTATAA	2	-	30328172-30328221	2qB	Mus musculus immediate early response 5-like (Ier5l), mRNA.				2610524G09Rik	2610524G09Rik
Mus musculus	RefSeq	ILMN_185941	ILMN_244913	2810442I21RIK	XM_901424.2	XM_901424.2		72735	94389909	XM_901424.2	2810442I21Rik	XP_906517.1	ILMN_2431292	006900689	S	882	GTCAGATAAGAGAGATGGAAACCCCAGTAGGAAAAACCCATTAAAGTAAC	11	-	16835171-16835220	11qA2	PREDICTED: Mus musculus RIKEN cDNA 2810442I21 gene, transcript variant 5 (2810442I21Rik), mRNA.					
Mus musculus	MEEBO	ILMN_213160	ILMN_213160	TDPOZ3	scl0399674.1_153				46402298	NM_207271	Tdpoz3		ILMN_2634273	007560102	S	660	ATGAAGGAGAGTCTAAAGAACCCCATTGAGATCATGGACCTGGATCTTGA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_203449	ILMN_203449	E430005I09RIK	ri|E430005I09|PX00097F17|AK088176|2434					AK088176	E430005I09Rik		ILMN_2557387	006060750	S	2085	GGGTGCATGCAGACTCTTGCTATGTCACATCCAGCAAGTGTGGTATGTGG										
Mus musculus	RefSeq	ILMN_214872	ILMN_214872	DDIT3	NM_007837.2	NM_007837.2		13198	31982414	NM_007837.2	Ddit3	NP_031863.2	ILMN_2927373	001230605	S	513	ACGCATGAAGGAGAAGGAGCAGGAGAACGAGCGGAAAGTGGCACAGCTAG	10	+	126733003-126733052	10qD3	Mus musculus DNA-damage inducible transcript 3 (Ddit3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of messenger RNA (mRNA) from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II-specific promoter [goid 42789] [evidence ISO]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence ISO]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	chop; gadd153; CHOP10; CHOP-10	chop; gadd153; CHOP10; CHOP-10
Mus musculus	RefSeq	ILMN_214872	ILMN_214872	DDIT3	NM_007837.2	NM_007837.2		13198	31982414	NM_007837.2	Ddit3	NP_031863.2	ILMN_2652909	001500497	S	395	GCCCTCGCTCTCCAGATTCCAGTCAGAGTTCTATGGCCCAGGAGGAAGAG	10	+	126732885-126732934	10qD3	Mus musculus DNA-damage inducible transcript 3 (Ddit3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of messenger RNA (mRNA) from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II-specific promoter [goid 42789] [evidence ISO]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence ISO]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	chop; gadd153; CHOP10; CHOP-10	chop; gadd153; CHOP10; CHOP-10
Mus musculus	RefSeq	ILMN_223538	ILMN_227659	SVOP	NM_026805.1	NM_026805.1		68666	72534842	NM_026805.1	Svop	NP_081081.1	ILMN_2765454	005270520	S	3053	GTCACTGCTCAATGGACACATTGCAAGGAAGCCAAATGTGCGCTGCGCTG	5	-	114477005-114477054	5qF	Mus musculus SV2 related protein (Svop), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AI415691; 1110030H18Rik	AI415691; 1110030H18Rik
Mus musculus	RefSeq	ILMN_201284	ILMN_235524	LOC665051	XM_974200.1	XM_974200.1		665051	94388219	XM_974200.1	LOC665051	XP_979294.1	ILMN_2541746	007610521	S	339	GCCCAGTGCCCTTACAGACATTCCCAGTGCCCTTATAGACATGCCCAATG	10	-	60984464-60984513		PREDICTED: Mus musculus similar to zonadhesin isoform 3 (LOC665051), mRNA.					
Mus musculus	RefSeq	ILMN_196271	ILMN_196271	TXNDC9	NM_172054.4	NM_172054.4		98258	141802781	NM_172054.4	Txndc9	NP_742051.1	ILMN_1255365	003180411	S	2639	GAGACTCCCCTTGCCCTTCTTTCTTTGACCTTCTGGCCTACCCTTGTATT	1	-	38042619-38042668	1qB	Mus musculus thioredoxin domain containing 9 (Txndc9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	APACD; AI098020	APACD; AI098020
Mus musculus	RefSeq	ILMN_192814	ILMN_216835	KLHL31	NM_172925.2	NM_172925.2		244923	124486713	NM_172925.2	Klhl31	NP_766513.2	ILMN_1247118	007650168	S	5034	TGGTCCATGAAAGCTAGTGAATTTTTGAGCCCCAGAATAGCCTGCACTGC	9	+	77506706-77506755	9qE1	Mus musculus kelch-like 31 (Drosophila) (Klhl31), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D930047P17Rik; Kbtbd1; 9830147P19Rik	D930047P17Rik; Kbtbd1; 9830147P19Rik
Mus musculus	RefSeq	ILMN_216835	ILMN_216835	KLHL31	NM_172925.2	NM_172925.2		244923	124486713	NM_172925.2	Klhl31	NP_766513.2	ILMN_3161736	004230537	S	2202	GCAGCCACTGGGTGGCCACTAGAGTTTGTTACAGGCACTCTTGCAAGGAG	9	+	77503874-77503923	9qE1	Mus musculus kelch-like 31 (Drosophila) (Klhl31), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D930047P17Rik; Kbtbd1; 9830147P19Rik	D930047P17Rik; Kbtbd1; 9830147P19Rik
Mus musculus	RefSeq	ILMN_190394	ILMN_227383	PUNC	NM_008988.2	NM_008988.2		19289	133892646	NM_008988.2	Punc	NP_033014.1	ILMN_2703079	002450100	S	2761	CCAATGTCCCCTCACCAATGCCTGCTGCCCATAGGACTTAGGAAACAAAC	9	+	65029057-65029106	9qC	Mus musculus putative neuronal cell adhesion molecule (Punc), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]		AI851425; 2810401C09Rik; WI-14920	AI851425; 2810401C09Rik; WI-14920
Mus musculus	RefSeq	ILMN_213713	ILMN_213713	OPN5	NM_181753.2	NM_181753.2		353344	38678529	NM_181753.2	Opn5	NP_861418.2	ILMN_2639992	007510762	S	685	GTCTTCTTCTAAAGAGGTAGCCCATTTCGACAGTCGAATCCATAGCAGCC	17	-	42056196-42056245	17qB3	Mus musculus opsin 5 (Opn5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpr136; PGR12; TMEM13; Neuropsin	Gpr136; PGR12; TMEM13; Neuropsin
Mus musculus	RefSeq	ILMN_213713	ILMN_213713	OPN5	NM_181753.2	NM_181753.2		353344	38678529	NM_181753.2	Opn5	NP_861418.2	ILMN_2900862	004490201	S	1154	AGGCCGAGAAACCCCGCACCTGTCCATCAGGGCTTCAGAAATAAGTGGCC	17	-	42020887-42020936	17qB3	Mus musculus opsin 5 (Opn5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpr136; PGR12; TMEM13; Neuropsin	Gpr136; PGR12; TMEM13; Neuropsin
Mus musculus	RefSeq	ILMN_200159	ILMN_200159	LOC385828	XM_358962.1	XM_358962.1			38080734	XM_358962.1	LOC385828		ILMN_2537791	005050682	S	119	AAATGGCAAGGTGCACGGGACTGACAAAACACGGGGGAGCCATGCAGGGA										
Mus musculus	RefSeq	ILMN_203258	ILMN_253735	SAAL1	XM_620495.3	XM_620495.3		78935	94380480	XM_620495.3	Saal1	XP_620495.1	ILMN_1256452	007650064	S	1401	CGTACGTGAGGTCGATGAGGCTCTTGCTGATGACCTAGAAGACAGCTTCC	7	-	53944755-53944804	7qB4	PREDICTED: Mus musculus serum amyloid A-like 1, transcript variant 1 (Saal1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]			
Mus musculus	RefSeq	ILMN_194492	ILMN_253735	SAAL1	XM_620495.3	XM_620495.3		78935	94380480	XM_620495.3	Saal1	XP_620495.1	ILMN_2506907	000290162	S	2740	TTTTAAGTAAGATGAGGGACTGCCACAGCCTCTCTCGTCTGTGACTCCCT	7	-	53943416-53943465	7qB4	PREDICTED: Mus musculus serum amyloid A-like 1, transcript variant 1 (Saal1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]			
Mus musculus	RefSeq	ILMN_204788	ILMN_243981	FLNC	XM_898823.2	XM_898823.2		68794	94377067	XM_898823.2	Flnc	XP_903916.1	ILMN_1212990	000770452	S	925	GGACACACTGAAGAGCCATCAGCCCTGTAGGAGACCGGGAGAGAATCTGG	6	+	29388737-29388766:29388767-29388786	6qA3.3	PREDICTED: Mus musculus filamin C, gamma (actin binding protein 280), transcript variant 2 (Flnc), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence TAS]	Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence TAS]		
Mus musculus	RefSeq	ILMN_201322	ILMN_201322	LOC382436	XM_356504.1	XM_356504.1			38090850	XM_356504.1	LOC382436		ILMN_1219506	001740037	S	975	GCCAGGGGTATGTGGCAACCAAGAAGAAATCGAAGCCGTCCTACCTAAGC										
Mus musculus	RefSeq	ILMN_215981	ILMN_215981	OLFR354	NM_146939.1	NM_146939.1		258941	22129034	NM_146939.1	Olfr354	NP_667150.1	ILMN_2665980	006040289	S	597	GCTGATGATCATTACCATGGGCTTGGTGTTTCTAGCTGTTCCTCTTATGT	2	+	36763064-36763113	2qB	Mus musculus olfactory receptor 354 (Olfr354), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR127-4	MOR127-4
Mus musculus	RefSeq	ILMN_222087	ILMN_222087	NME3	NM_019730.1	NM_019730.1		79059	9790120	NM_019730.1	Nme3	NP_062704.1	ILMN_2744414	006420722	S	440	CTCGGTGGAAAGTGCTCACAGAGAAATCGCTCTTTGGTTCCGTGAGGCCG	17	+	25033690-25033736:25033797-25033799	17qA3.3	Mus musculus non-metastatic cells 3, protein expressed in (Nme3), mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Ndk3; AI413736; Nm23-M3; 1810009F08Rik; Nm23-DR; DR-nm23	Ndk3; AI413736; Nm23-M3; 1810009F08Rik; Nm23-DR; DR-nm23
Mus musculus	RefSeq	ILMN_214530	ILMN_214530	TCAM1	NM_029467.2	NM_029467.2		75870	46909610	NM_029467.2	Tcam1	NP_083743.1	ILMN_2912865	002260228	S	2618	GGGACTACAAGTGTGTACCATCACACCCGAACTAACTTTGGGAGGGCAGC	11	+	106149006-106149055	11qE1	Mus musculus testicular cell adhesion molecule 1 (Tcam1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]		4930570F09Rik; AI429105	4930570F09Rik; AI429105
Mus musculus	RefSeq	ILMN_214530	ILMN_214530	TCAM1	NM_029467.2	NM_029467.2		75870	46909610	NM_029467.2	Tcam1	NP_083743.1	ILMN_2648949	004570193	S	1379	TTTCCCTTACGGAGAGTTGGGTGGCAGCCTTGTTAGTTGCAGGACCACAC	11	+	106146999-106147048	11qE1	Mus musculus testicular cell adhesion molecule 1 (Tcam1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]		4930570F09Rik; AI429105	4930570F09Rik; AI429105
Mus musculus	MEEBO	ILMN_188020	ILMN_188020	MAP4K2	scl52873.29_9				6678799	NM_009006	Map4k2		ILMN_2449150	001190561	S	18	CTGATGTTTGCTCCCAGCAAAGGTGGGTGCCACAAGCCAAAGACAGGGCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process by which vesicles are directed to specific destination membranes, mediated by microtubules that grow between molecules at the vesicle membrane and target membrane surfaces [goid 6903] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_240175	ILMN_240175	RHOX7	NM_001025086.1	NM_001025086.1		547168	71480151	NM_001025086.1	Rhox7	NP_001020257.1	ILMN_3162070	005570343	S	651	CAGTCTGTGTCTCTAAAGTGCCCCCGCATACGGCCAGTTTTGGTGTCCAC	X	+	35191679-35191696:35192394-35192425	XqA3.3	Mus musculus reproductive homeobox 7 (Rhox7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm712	Gm712
Mus musculus	RefSeq	ILMN_219760	ILMN_219760	HRASLS	NM_013751.5	NM_013751.5		27281	146134402	NM_013751.5	Hrasls	NP_038779.2	ILMN_1251605	002900156	S	2377	AACTATATTTGCAGGGCATTTGTCTCTGGCAGAATTACACCGCCTGTCAG				16qB2	Mus musculus HRAS-like suppressor (Hrasls), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A-C1; 2810012B06Rik; Hrasrs	A-C1; 2810012B06Rik; Hrasrs
Mus musculus	RefSeq	ILMN_209520	ILMN_322467	EG224180	XR_035108.1	XR_035108.1		224180	149267712	XR_035108.1	EG224180		ILMN_2596575	006660162	S	566	CCGGTTCTAAATAGGTTTTACAAATAGATAGTGATTGAGCCTGGAAACAC				16qB5	PREDICTED: Mus musculus predicted gene, EG224180 (EG224180), misc RNA.					
Mus musculus	MEEBO	ILMN_185032	ILMN_185032	ELAC1	scl51272.5_527				31981496	NM_053255	Elac1		ILMN_2423617	005220048	S	1	CTTGACGCTGCACTGCCAAGCAGCCTGGGTGATTCTCAAAGACATGAGTA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188902	ILMN_256936	POLR2A	NM_009089.2	NM_009089.2		20020	118130551	NM_009089.2	Polr2a	NP_033115.1	ILMN_1242400	000450609	S	5531	CACCTACCACCCCAAAATATTCTCCAACCTCCCCGACATACTCACCAACC	11	-	69548130-69548179	11qB3	Mus musculus polymerase (RNA) II (DNA directed) polypeptide A (Polr2a), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Rpo2-1; 220kDa	Rpo2-1; 220kDa
Mus musculus	RefSeq	ILMN_221937	ILMN_221937	CRH	NM_205769.1	NM_205769.1		12918	45429989	NM_205769.1	Crh	NP_991338.1	ILMN_1233069	000670019	S	944	CAGCGTTATTTGTATTGCCCATGCTTAATTTCTATGTGCAAATAAGCGTC	3	-	19593660-19593709	3qA2	Mus musculus corticotropin releasing hormone (Crh), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol [goid 6704] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	Gm1347; CRF; MGC151298	Gm1347; CRF; MGC151298
Mus musculus	RefSeq	ILMN_203586	ILMN_232982	ZSWIM6	XM_358311.5	XM_358311.5		67263	94395662	XM_358311.5	Zswim6	XP_358311.5	ILMN_1219162	002600484	S	4678	GCATTAAGAACATACAGTGTGCCAGAACCGGGGTTCGTGCCTCCTAGCCT	13	-	108515421-108515470	13qD2.1	PREDICTED: Mus musculus zinc finger, SWIM domain containing 6 (Zswim6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208981	ILMN_208981	MAPK8IP3	NM_013931.1	NM_013931.1		30957	7305254	NM_013931.1	Mapk8ip3	NP_038959.1	ILMN_2600660	007550128	S	1013	GTCAGTGTCACAAAGAACAACAAGCAGGCCCGAGAGAAGCGCAATAGCCG	17	-	24642104-24642153	17qA3.3	Mus musculus mitogen-activated protein kinase 8 interacting protein 3 (Mapk8ip3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; The smooth endoplasmic reticulum (ER) has with no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER [goid 5790] [evidence IDA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IDA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IDA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IPI]; Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]	JSAP1a; BB120594; JIP-3; Syd2; D17Wsu15e; mKIAA1066; JSAP1d; JSAP1b; JSAP1; JSAP1c; Jip3	JSAP1a; BB120594; JIP-3; Syd2; D17Wsu15e; mKIAA1066; JSAP1d; JSAP1b; JSAP1; JSAP1c; Jip3
Mus musculus	RefSeq	ILMN_208981	ILMN_208981	MAPK8IP3	NM_013931.1	NM_013931.1		30957	7305254	NM_013931.1	Mapk8ip3	NP_038959.1	ILMN_2600661	005090386	S	1026	AGAACAACAAGCAGGCCCGAGAGAAGCGCAATAGCCGTAACATGGAGGTC	17	-	24642091-24642140	17qA3.3	Mus musculus mitogen-activated protein kinase 8 interacting protein 3 (Mapk8ip3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; The smooth endoplasmic reticulum (ER) has with no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER [goid 5790] [evidence IDA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IDA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IDA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IPI]; Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]	JSAP1a; BB120594; JIP-3; Syd2; D17Wsu15e; mKIAA1066; JSAP1d; JSAP1b; JSAP1; JSAP1c; Jip3	JSAP1a; BB120594; JIP-3; Syd2; D17Wsu15e; mKIAA1066; JSAP1d; JSAP1b; JSAP1; JSAP1c; Jip3
Mus musculus	Riken	ILMN_201941	ILMN_201941	SLC26A3	ri|9030623B18|PX00025J06|AK018566|1246					AK018566	Slc26a3		ILMN_2545805	000670438	S	1190	CTGGGTTTGTTCTTTCCAAGGTGGGAATAGCAAGATCTTCACAGCCAAGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA];  [goid 15380] [evidence IDA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215323	ILMN_215323	OLFR295	NM_146851.2	NM_146851.2		258850	121583722	NM_146851.2	Olfr295	NP_667062.2	ILMN_1225728	006350711	S	720	CCCTCACATTATTGTGGTGTCTGTGTTTCTTAGTTCTGGTGCCTATGTAT	7	+	93734506-93734555	7qD3	Mus musculus olfactory receptor 295 (Olfr295), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR220-1	MOR220-1
Mus musculus	RefSeq	ILMN_217493	ILMN_217493	ZER1	NM_178694.3	NM_178694.3		227693	31542270	NM_178694.3	Zer1	NP_848809.2	ILMN_1227218	004050138	S	4019	GCATCCCATTGCTTTCCTACCTGGGTCTGGGGAAATGTCTGTACTTCAGG	2	-	29956578-29956627	2qB	Mus musculus zer-1 homolog (C. elegans) (Zer1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Zyg11bl; C230075L19Rik	Zyg11bl; C230075L19Rik
Mus musculus	RefSeq	ILMN_210566	ILMN_210566	PRL7A1	NM_008930.1	NM_008930.1		19113	6679470	NM_008930.1	Prl7a1	NP_032956.1	ILMN_2606903	007510736	S	851	ATAGTCTGATTTTATGCATTTCAAAGATGAGCATGAGTAAAATGGGCATC	13	-	27725269-27725318	13qA3.1	Mus musculus prolactin family 7, subfamily a, member 1 (Prl7a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PLP-G; Prlpg; AA409971; AA407021; AA410116; Prlpe; PLP-E	PLP-G; Prlpg; AA409971; AA407021; AA410116; Prlpe; PLP-E
Mus musculus	RefSeq	ILMN_190443	ILMN_254898	UPF2	NM_001081132.1	NM_001081132.1		326622	124487282	NM_001081132.1	Upf2	NP_001074601.1	ILMN_2470211	006650372	S	5100	GCTGCCCAATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGCA	2	+	5977675-5977724	2qA1	Mus musculus UPF2 regulator of nonsense transcripts homolog (yeast) (Upf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_207532	ILMN_207532	1110051N18RIK	XM_359205.1	XM_359205.1			38081532	XM_359205.1	1110051N18Rik		ILMN_2588007	000430176	I	1614	TTTTGTGTATGATATGGGGACACTAGCTATCCAGATGATTGTGAGCTCTC										
Mus musculus	RefSeq	ILMN_215933	ILMN_215933	GSTZ1	NM_010363.3	NM_010363.3		14874	133892597	NM_010363.3	Gstz1	NP_034493.1	ILMN_1229964	007320064	S	1201	GGAGTCCAGGCTATTTCTTCCAGGTCCCCGTATTAAAGTTTTCTCTAGCA	12	+	88505218-88505267	12qD2	Mus musculus glutathione transferase zeta 1 (maleylacetoacetate isomerase) (Gstz1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6572] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence TAS]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 4-maleylacetoacetate = 4-fumarylacetoacetate [goid 16034] [evidence ISA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence TAS]	MAAI	MAAI
Mus musculus	Riken	ILMN_202476	ILMN_202476	6330514E22RIK	ri|6330514E22|PX00043E10|AK018212|1329					AK018212	6330514E22Rik		ILMN_1232426	001510246	S	1024	AGCCCTGGCTGACCTAACGGTTCCTTTGTACCTGAGTTTGACCTCATGCC										
Mus musculus	Riken	ILMN_203669	ILMN_203669	9530013H16RIK	ri|9530013H16|PX00111F03|AK035305|2446					AK035305	9530013H16Rik		ILMN_2559067	002470632	S	1863	GGGCACTCCTGCAGTCCTACTCAGAGGCCAAAAGACCATTTAAGTCCAGG										
Mus musculus	MEEBO	ILMN_221646	ILMN_221646	TLM	scl76.3.1_20	NM_011601.1			7549796	NM_011601.1	Tlm		ILMN_2738357	004230593	S	349	GAGGATTCTTTGATTCAATGTCACCCCTCCAATGCACTCTTGTTCTGTCT										
Mus musculus	RefSeq	ILMN_199365	ILMN_199365	TGS1	NM_054089.3	NM_054089.3		116940	50233913	NM_054089.3	Tgs1	NP_473430.2	ILMN_1255836	001690370	S	1552	TGGATCTGCGCAAGCAGATGCCTGTGAAGAGCAAGCACATCCTGTTCACC	4	+	3520684-3520733	4qA1	Mus musculus trimethylguanosine synthase homolog (S. cerevisiae) (Tgs1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ncoa6ip; Pimt; D4Ertd800e	Ncoa6ip; Pimt; D4Ertd800e
Mus musculus	RefSeq	ILMN_199365	ILMN_199365	TGS1	NM_054089.3	NM_054089.3		116940	50233913	NM_054089.3	Tgs1	NP_473430.2	ILMN_2660485	005900523	S	2679	GCGGAAGTGTGATACTGTAAAGCACAGAGAGATCATGTGGAGTGAGGATG	4	+	3542141-3542152:3542153-3542190	4qA1	Mus musculus trimethylguanosine synthase homolog (S. cerevisiae) (Tgs1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ncoa6ip; Pimt; D4Ertd800e	Ncoa6ip; Pimt; D4Ertd800e
Mus musculus	RefSeq	ILMN_199365	ILMN_199365	TGS1	NM_054089.3	NM_054089.3		116940	50233913	NM_054089.3	Tgs1	NP_473430.2	ILMN_2588456	002320243	S	2647	GACCAGCACTTCTGAAGACCAGCACTTCTGAAGCGGAAGTGTGATACTGT	4	+	3542109-3542152:3542153-3542158	4qA1	Mus musculus trimethylguanosine synthase homolog (S. cerevisiae) (Tgs1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ncoa6ip; Pimt; D4Ertd800e	Ncoa6ip; Pimt; D4Ertd800e
Mus musculus	RefSeq	ILMN_235565	ILMN_235565	GTF2I	NM_001080747.1	NM_001080747.1		14886	124001575	NM_001080747.1	Gtf2i	NP_001074216.1	ILMN_3118216	006550181	A	1220	GAACGGAAGTGGAAGTGCCAGCAGAAGATGATGACTATTCTCCACCCACC	5	-	134742503-134742526:134750409-134750434	5qG2	Mus musculus general transcription factor II I (Gtf2i), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	GtfII-I; 6030441I21Rik; TFII-I; Spin; BAP-135; WBSCR6	GtfII-I; 6030441I21Rik; TFII-I; Spin; BAP-135; WBSCR6
Mus musculus	Riken	ILMN_204857	ILMN_204857	A130054J05RIK	ri|A130054J05|PX00124I14|AK037846|2110					AK037846	A130054J05Rik		ILMN_1216609	004280685	S	1691	CATGCTTCTCCAAAGCTATCCCTCTTGGTTTTCAGGTCCAGAGAGGCTGC										
Mus musculus	RefSeq	ILMN_261458	ILMN_261458	SARS	NM_011319.1	NM_011319.1		20226	33468930	NM_011319.1	Sars	NP_035449.1	ILMN_2871412	003840377	S	1700	GGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACA	3	-	108554784-108554833	3qF3	Mus musculus seryl-aminoacyl-tRNA synthetase (Sars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6434] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-serine + tRNA(Ser) = AMP + diphosphate + L-seryl-tRNA(Ser) [goid 4828] [evidence IEA]	C78314; Sars1; Strs	C78314; Sars1; Strs
Mus musculus	RefSeq	ILMN_217315	ILMN_235220	MAPK6	NM_027418.1	NM_027418.1		50772	76573875	NM_027418.1	Mapk6	NP_081694.1	ILMN_2681776	000990110	S	3744	GCTGATCCGAGACGTCAGCTCGTCCTGAGGCTGTCCATGTACGTTAAGTA	9	-	75235004-75235053	9qD	Mus musculus mitogen-activated protein kinase 6 (Mapk6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130053K17Rik; Mapk4; Prkm4; Mapk63; 2610021I23Rik; Prkm6; Erk3	D130053K17Rik; Mapk4; Prkm4; Mapk63; 2610021I23Rik; Prkm6; Erk3
Mus musculus	RefSeq	ILMN_235220	ILMN_235220	MAPK6	NM_027418.1	NM_027418.1		50772	76573875	NM_027418.1	Mapk6	NP_081694.1	ILMN_3147112	006770133	A	3462	GGTAACAAAAGTATGTGGCGAAGCCTAACCCACCCATAGTGCTCCACGGC	9	-	75235286-75235335	9qD	Mus musculus mitogen-activated protein kinase 6 (Mapk6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130053K17Rik; Mapk4; Prkm4; Mapk63; 2610021I23Rik; Prkm6; Erk3	D130053K17Rik; Mapk4; Prkm4; Mapk63; 2610021I23Rik; Prkm6; Erk3
Mus musculus	RefSeq	ILMN_235220	ILMN_235220	MAPK6	NM_027418.1	NM_027418.1		50772	76573875	NM_027418.1	Mapk6	NP_081694.1	ILMN_3068722	000110497	I	77	TGCCGGGGACCGGCCTGAGACAGGGCTCCTGACACCTTTCCGGACGTTAA	9	-	75257040-75257089	9qD	Mus musculus mitogen-activated protein kinase 6 (Mapk6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D130053K17Rik; Mapk4; Prkm4; Mapk63; 2610021I23Rik; Prkm6; Erk3	D130053K17Rik; Mapk4; Prkm4; Mapk63; 2610021I23Rik; Prkm6; Erk3
Mus musculus	Riken	ILMN_207296	ILMN_207296	4022450E19RIK	ri|4022450E19|PX00637I19|AK076225|3360					AK076225	4022450E19Rik		ILMN_1246911	005260634	S	2786	CTAGGGGTTGAATCTAACAGGCACTCTTCCCCTGAGCTGTATCTCAGGTT										
Mus musculus	RefSeq	ILMN_210054	ILMN_210054	SLC35B3	NM_134060.2	NM_134060.2		108652	31981635	NM_134060.2	Slc35b3	NP_598821.1	ILMN_1221624	004010626	S	1608	GCAGCGCGGTACTGTGAGTGGCACTGTGTCTCCATTCCGTTTTGCTGGTG	13	-	38939872-38939921	13qA3.3	Mus musculus solute carrier family 35, member B3 (Slc35b3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AI428480; 4921526O06Rik; CGI-19	AI428480; 4921526O06Rik; CGI-19
Mus musculus	RefSeq	ILMN_210054	ILMN_210054	SLC35B3	NM_134060.2	NM_134060.2		108652	31981635	NM_134060.2	Slc35b3	NP_598821.1	ILMN_2948971	000580341	S	1583	AGACTGATTGGAAATCCTCCCAGCCTGCAGCGCGGTACTGTGAGTGGCAC	13	-	38939897-38939946	13qA3.3	Mus musculus solute carrier family 35, member B3 (Slc35b3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AI428480; 4921526O06Rik; CGI-19	AI428480; 4921526O06Rik; CGI-19
Mus musculus	RefSeq	ILMN_216314	ILMN_216314	AQP1	NM_007472.1	NM_007472.1		11826	6680709	NM_007472.1	Aqp1	NP_031498.1	ILMN_2980663	001580167	S	2152	CACTGTGCCCTTAACCACATTGTGAACCGAGAGCCACATTCTTCAGGTGC	6	+	55298074-55298123	6qB3	Mus musculus aquaporin 1 (Aqp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]		
Mus musculus	RefSeq	ILMN_216314	ILMN_216314	AQP1	NM_007472.1	NM_007472.1		11826	6680709	NM_007472.1	Aqp1	NP_031498.1	ILMN_2980661	004210139	S	2251	GCTGCACACTCGTCTCCGTTCCCTAGCAGACACTGTACCCACTTAACAGA	6	+	55298173-55298222	6qB3	Mus musculus aquaporin 1 (Aqp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]		
Mus musculus	RefSeq	ILMN_208793	ILMN_208793	PRL3A1	NM_025896.2	NM_025896.2		67000	142373533	NM_025896.2	Prl3a1	NP_080172.1	ILMN_2589586	004610102	S	873	TTATCCAGATCATCAATGCTTTATTTCTTTGATTTTTATCTTTTGCATGC	13	+	27368120-27368169	13qA3.1	Mus musculus prolactin family 3, subfamily a, member 1 (Prl3a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	PLP-H; Plpi; 1600016E11Rik; RP23-189A16.6; PLP-I; Prlpi	PLP-H; Plpi; 1600016E11Rik; RP23-189A16.6; PLP-I; Prlpi
Mus musculus	Riken	ILMN_205558	ILMN_205558	4732431J01RIK	ri|4732431J01|PX00050P08|AK028672|3977					AK028672	4732431J01Rik		ILMN_1246030	003400390	S	3852	AAGCAGTCTTAGTGCTGGGAGACGGAAGCAGGAGCTAGTGTGAGGCCAGC										
Mus musculus	RefSeq	ILMN_186254	ILMN_245367	IRG1	XM_905897.2	XM_905897.2		16365	94397732	XM_905897.2	Irg1	XP_910990.3	ILMN_1237712	007560307	S	1359	CTGGAGGAAACCACTGAGCCAGGAAGATCTGCGCAACAAGTTCCGAGCCA				14qE2.3	PREDICTED: Mus musculus immunoresponsive gene 1 (Irg1), mRNA.		The chemical reactions and pathways resulting in the breakdown of propionate, the anion derived from propionic acid [goid 19543] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]	Catalysis of the reaction: 2-hydroxybutane-1,2,3-tricarboxylate = (Z)-but-2-ene-1,2,3-tricarboxylate + H2O [goid 47547] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186254	ILMN_245367	IRG1	XM_905897.2	XM_905897.2		16365	94397732	XM_905897.2	Irg1	XP_910990.3	ILMN_2433955	004200192	S	2038	GCAGATCAGACAGTTTGACTTGGGGTGGTGAAGCAGTGTGGCATAAGACC				14qE2.3	PREDICTED: Mus musculus immunoresponsive gene 1 (Irg1), mRNA.		The chemical reactions and pathways resulting in the breakdown of propionate, the anion derived from propionic acid [goid 19543] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]	Catalysis of the reaction: 2-hydroxybutane-1,2,3-tricarboxylate = (Z)-but-2-ene-1,2,3-tricarboxylate + H2O [goid 47547] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186934	ILMN_186934	ADAM30	scl22835.1_109				33859703	NM_027665	Adam30		ILMN_2763590	007400767	S	2178	GTAATCGCCGCCGTAATCTCCAGCAAAAAAATCCAGCTGAGACGCAGGGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186934	ILMN_186934	ADAM30	scl22835.1_109				33859703	NM_027665	Adam30		ILMN_2439745	005720176	S	14	TCGTGCAAATTTCCCATACATTTCAAATCAGCAAAAATAAACTATATTAT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212805	ILMN_212805	RSRC1	NM_025822.3	NM_025822.3		66880	113204628	NM_025822.3	Rsrc1	NP_080098.1	ILMN_2630512	002510132	S	2832	GGCCCATGTGGTTGTTAATGTGAACACGGCTATGCAGTAGGGATTTCGGA	3	+	67161925-67161974	3qE1	Mus musculus arginine/serine-rich coiled-coil 1 (Rsrc1), mRNA.	A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence ISO]; The process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition [goid 380] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SRrp53; 1200013F24Rik; MGC103357	SRrp53; 1200013F24Rik; MGC103357
Mus musculus	RefSeq	ILMN_212805	ILMN_212805	RSRC1	NM_025822.3	NM_025822.3		66880	113204628	NM_025822.3	Rsrc1	NP_080098.1	ILMN_2754787	001010487	S	489	AGTAGAAGCAGTGAAAGATCCAGTCACAGAAGAACCCGTAGCAGGTCCAG	3	+	66886489-66886538	3qE1	Mus musculus arginine/serine-rich coiled-coil 1 (Rsrc1), mRNA.	A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence ISO]; The process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition [goid 380] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SRrp53; 1200013F24Rik; MGC103357	SRrp53; 1200013F24Rik; MGC103357
Mus musculus	RefSeq	ILMN_212326	ILMN_212326	FZD7	NM_008057.2	NM_008057.2		14369	40254636	NM_008057.2	Fzd7	NP_032083.2	ILMN_2907560	006020424	S	3675	AGCATCATGGGAGTTGACCTTTACCCTACCTTTGACACTGACTGTCCTCC	1	+	59543334-59543383	1qC1.3	Mus musculus frizzled homolog 7 (Drosophila) (Fzd7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]	Fz7	Fz7
Mus musculus	RefSeq	ILMN_243060	ILMN_243060	RNU6	NR_003027.1	NR_003027.1		19862	94400873	NR_003027.1	Rnu6		ILMN_2959272	004570292	S	53	TAGCATGGCCCCTGCGCAAGGATGACACGCAAATTCGTGAAGCGTTCCAT					Mus musculus U6 small nuclear RNA (Rnu6), non-coding RNA.					
Mus musculus	RefSeq	ILMN_222711	ILMN_222711	2010004A03RIK	NM_029646.1	NM_029646.1		76527	33239432	NM_029646.1	2010004A03Rik	NP_083922.1	ILMN_2753761	006620315	S	1066	CCCTCACGTGGAAGCTGTGTTATCTCTTCTGAGTACTCCAGGCCTAAGCC	8	-	113266615-113266664	8qE1	Mus musculus RIKEN cDNA 2010004A03 gene (2010004A03Rik), mRNA.				AI593503	AI593503
Mus musculus	RefSeq	ILMN_216856	ILMN_216856	GBP1	NM_010259.2	NM_010259.2		14468	134031981	NM_010259.2	Gbp1	NP_034389.2	ILMN_1233293	005690246	S	2526	CTTTCATGCTCCAGCCTACTGTGTTTCCTTTCTAATCTCTCTTTTTATTT	3	+	142281846-142281895	3qH1	Mus musculus guanylate binding protein 1 (Gbp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GMP, guanosine monophosphate [goid 19002] [evidence IDA]	MGC124334; Gbp-1; Mpa-1; 5830475C06; Mpa1; Mag-1	MGC124334; Gbp-1; Mpa-1; 5830475C06; Mpa1; Mag-1
Mus musculus	RefSeq	ILMN_196900	ILMN_252268	GM553	XM_919936.2	XM_919936.2		227091	94363558	XM_919936.2	Gm553	XP_925029.1	ILMN_1218486	002450291	S	422	CGGCAAGAGCACAGAGGTCAAAGTCCTGGGTGTCAGTCAAGCTCAGCAGC				1qC1.1	PREDICTED: Mus musculus gene model 553, (NCBI) (Gm553), mRNA.					
Mus musculus	RefSeq	ILMN_191524	ILMN_244259	1810008N23RIK	XM_911199.2	XM_911199.2		69096	94370295	XM_911199.2	1810008N23Rik	XP_916292.1	ILMN_1245211	004260280	S	2472	TTTTTACCATTAATATGATTTCCTTCATTTTCCCTATATATTTTATGAAA					PREDICTED: Mus musculus RIKEN cDNA 1810008N23 gene (1810008N23Rik), mRNA.					
Mus musculus	MEEBO	ILMN_196124	ILMN_196124	1700027I24RIK	scl36036.4.1_1						1700027I24Rik		ILMN_2521859	002120594	S	7	AAAAGTGTCCTGAGAAAAAGTAAAAAGAAGAGAGAGGAAAAGAGATCAAC										
Mus musculus	RefSeq	ILMN_211826	ILMN_211826	CAND2	NM_025958.1	NM_025958.1		67088	41281586	NM_025958.1	Cand2	NP_080234.1	ILMN_2619869	002750386	S	4495	CAGGTCGTAGTGAACAAATTTAAGATCTACCTAAAAGCAACAGGGCAGGA	6	+	115754633-115754682	6qE3	Mus musculus cullin-associated and neddylation-dissociated 2 (putative) (Cand2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with TATA-binding protein (TBP), a component of various transcription factors [goid 17025] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2210404G23Rik; Tp120b; mKIAA0667	2210404G23Rik; Tp120b; mKIAA0667
Mus musculus	Riken	ILMN_203297	ILMN_203297	C430045L21RIK	ri|C430045L21|PX00080D02|AK049578|2223					AK049578	C430045L21Rik		ILMN_1239637	003710113	S	1889	GAGGGTCCAAGTTAAATTCCCAGCACAAATGTCAGGCAGCTCACTGCTGC										
Mus musculus	RefSeq	ILMN_245892	ILMN_245892	ZFP551	NM_001033820.2	NM_001033820.2		619331	141802370	NM_001033820.2	Zfp551	NP_001028992.1	ILMN_3160234	007610220	S	2051	GCCGTCGATCGAATCTTGTCCGACACCAGCGAGTTCACACCTAAGAAGAG	7	-	13000732-13000738:13000739-13000781	7qA1	Mus musculus zinc fingr protein 551 (Zfp551), mRNA. XM_921380 XM_921386 XM_921391 XM_921394			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9630004E07Rik	9630004E07Rik
Mus musculus	RefSeq	ILMN_209777	ILMN_209777	FOXG1	NM_008241.1	NM_008241.1		15228	6679842	NM_008241.1	Foxg1	NP_032267.1	ILMN_2599125	004860711	S	2767	ACCTTGCAAATATGTAACCTGTGTTGCGCAAATGCCGCATCAATTTGAGT	12	+	50487674-50487723	12qB3	Mus musculus forkhead box G1 (Foxg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [evidence IMP]; The recognition of molecules at the central nervous system midline choice point by an axon growth cone; this choice point determines whether the growth cone will cross the midline [goid 16199] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The process by which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron [goid 48667] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	BF-1; Bf1; Hfh9; Hfhbf1; 2900064B05Rik	BF-1; Bf1; Hfh9; Hfhbf1; 2900064B05Rik
Mus musculus	RefSeq	ILMN_200425	ILMN_251931	LOC637516	XM_913225.3	XM_913225.3		637516	149274938	XM_913225.3	LOC637516	XP_918318.1	ILMN_2538714	001110433	S	1183	GCCATATACAATGCTGTATATGCTGTTGCCCATGCACTCCATGAGCTGAC					PREDICTED: Mus musculus similar to putative pheromone receptor (LOC637516), mRNA.					
Mus musculus	RefSeq	ILMN_197307	ILMN_197307	LOC218617	XM_122636.2	XM_122636.2			38075070	XM_122636.2	LOC218617		ILMN_1242739	006580047	S	1274	AGCCTAAGGAGACCCAGGTGGTAGCAATCTTCAGTTATGAGGCTGCCCAG										
Mus musculus	RefSeq	ILMN_201346	ILMN_201346	LOC382501	XM_356536.1	XM_356536.1			38091581	XM_356536.1	LOC382501		ILMN_2541970	005820136	S	1155	GGCATATGGGCAGCCTTCCTCTTGGACACTGGAGCCACTTGTGCAGTCCT										
Mus musculus	RefSeq	ILMN_254204	ILMN_254204	OXSR1	NM_133985.1	NM_133985.1		108737	110626164	NM_133985.1	Oxsr1	NP_598746.1	ILMN_2830107	000630037	S	1509	GGCCTGAACCTACAACTGCCAAAGAACCCAGCAACAAACCTCCCAGCTTG	9	-	119150146-119150195	9qF3	Mus musculus oxidative-stress responsive 1 (Oxsr1), mRNA. XM_993249		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Osr1; 2810422B09Rik; AW209236; mKIAA1101; 2210022N24Rik; AI462649	Osr1; 2810422B09Rik; AW209236; mKIAA1101; 2210022N24Rik; AI462649
Mus musculus	MEEBO	ILMN_209920	ILMN_209920	MTUS1	scl00102103.1_84	NM_178902.3			31542082	NM_178902.3	Mtus1		ILMN_2600463	001450192	S	4906	AGAGAACGAAACTTTGGCTAGTTTGAATGATTCTTCTGCAAGGCGAAAAG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]			
Mus musculus	RefSeq	ILMN_201283	ILMN_201283	LOC382365	XM_356465.1	XM_356465.1			38090474	XM_356465.1	LOC382365		ILMN_1214785	005360019	S	123	GCGATGGAGAGATCCCCTCACTGGACAATGGAAAGAACCAGATCCCGTCC										
Mus musculus	RefSeq	ILMN_211442	ILMN_211442	FABP4	NM_024406.1	NM_024406.1		11770	14149634	NM_024406.1	Fabp4	NP_077717.1	ILMN_2615947	005420192	S	548	TAATTTTTTCTGAAGATGCATTTTATTGGATATGGTTATGTTGATTAAAT	3	-	10204364-10204413	3qA1	Mus musculus fatty acid binding protein 4, adipocyte (Fabp4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ap2; ALBP/Ap2; Lbpl	Ap2; ALBP/Ap2; Lbpl
Mus musculus	Riken	ILMN_206854	ILMN_206854	D430037E19RIK	ri|D430037E19|PX00194P03|AK085106|1528					AK085106	D430037E19Rik		ILMN_1252156	006590082	S	1237	CACACCCGAGAGTGTTGGTGGCTCCGAGGAAGGCAGGTGCTACTCAGAGA										
Mus musculus	MEEBO	ILMN_186957	ILMN_186957	1190028F09	scl0330481.1_5						1190028F09		ILMN_1253503	003610471	S	14	CCTGTCATTAAAGCTGTCGCTGGCCCGCCTGTTTGGAATGGGGTTCTGCC										
Mus musculus	RefSeq	ILMN_212760	ILMN_212760	SLC9A3R1	NM_012030.2	NM_012030.2		26941	115270973	NM_012030.2	Slc9a3r1	NP_036160.1	ILMN_1240256	006270296	S	1737	CATGATTCTTGTGATTTTCCTGGTCGTTGTACCCAGGGCATGGCAATGGC	11	+	115042307-115042356	11qE2	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 (Slc9a3r1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; A series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response [goid 19933] [evidence ISA]; The regulation of the levels, transport, and metabolism of phosphate ions within a cell or between a cell and its external environment [goid 30643] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	EBP-50; NHE-RF; MGC95776; NHERF-1	EBP-50; NHE-RF; MGC95776; NHERF-1
Mus musculus	RefSeq	ILMN_186394	ILMN_237099	2900006K08RIK	NM_028377.2	NM_028377.2		72873	142377432	NM_028377.2	2900006K08Rik	NP_082653.1	ILMN_1229947	004200092	S	219	GTCACAGAACTCTCTAGGATTGAATATCGTGATACTTCCCGAAGACTGGC	12	+	85752063-85752112	12qD1	Mus musculus RIKEN cDNA 2900006K08 gene (2900006K08Rik), mRNA.				AI427784	AI427784
Mus musculus	RefSeq	ILMN_194286	ILMN_235853	POGK	NM_175170.2	NM_175170.2		71592	31340927	NM_175170.2	Pogk	NP_780379.1	ILMN_2744816	006020523	S	3038	CTCCGGTTTCAGGAGTCCAATGACCTCTTAGCCTCCTTTGACATCTGCAG	1	-	168328003-168328052	1qH2.3	Mus musculus pogo transposable element with KRAB domain (Pogk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	mKIAA1513; 9130401E23Rik; BASS2	mKIAA1513; 9130401E23Rik; BASS2
Mus musculus	RefSeq	ILMN_198963	ILMN_198963	GM590	XM_150244.3	XM_150244.3		235634	94386579	XM_150244.3	Gm590	XP_150244.1	ILMN_1220788	006770022	S	220	GGAAACAGAGGCTGGAGACAAAGCTGAGGCTGCGGAACAACCCAGACGAG	9	-	110817466-110817515	9qF3	PREDICTED: Mus musculus gene model 590, (NCBI) (Gm590), mRNA.					
Mus musculus	MEEBO	ILMN_189799	ILMN_189799	C130063H03RIK	scl0319339.2_208						C130063H03Rik		ILMN_2464456	002470131	S	15	TTAAAACATATTTTCATCTATGGTGGATCAATAGGTCTAGATCAATGTAT										
Mus musculus	Riken	ILMN_203169	ILMN_203169	A030009J19RIK	ri|A030009J19|PX00063D13|AK037202|2778					AK037202	A030009J19Rik		ILMN_1216636	004120021	S	2549	GAAGACAGAAGGGTCAGGAAACATCTCAGAAGGAAGCCGGATCTTCAGCC										
Mus musculus	MEEBO	ILMN_212695	ILMN_212695	CIAS1	scl41500.10.1_4	NM_145827.1			22003869	NM_145827.1	Cias1		ILMN_2629297	007550328	S	3040	GGGCAACAATGATCTTGGCGATCTGTGCGTGGTGACCCTCTGTGAGGTGC										
Mus musculus	RefSeq	ILMN_215672	ILMN_215672	3110001I22RIK	NM_025653.2	NM_025653.2		66598	142358124	NM_025653.2	3110001I22Rik	NP_079929.1	ILMN_1257141	005270537	S	1260	GCTTCATATGTGGCGTTTTTGTGATGAAATAACCTCAGTTAAACATCTAG	16	+	13678127-13678176	16qA1	Mus musculus RIKEN cDNA 3110001I22 gene (3110001I22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196376	ILMN_196376	6330565B04RIK	XM_129826.1	XM_129826.1			20844890	XM_129826.1	6330565B04Rik		ILMN_1243044	005870356	S	547	GGTGAGACACGGGCCACTCACTGAATAGGAGAGGGACTAAGTGCTTTGAA										
Mus musculus	RefSeq	ILMN_198697	ILMN_198697	LOC209372	XM_125463.2	XM_125463.2			38086915	XM_125463.2	LOC209372		ILMN_1242142	004230703	S	840	CCCCCTCACCTGGATTCTACTGTTTAGCCTTGCAGTCTGTGTGAGCAAAA										
Mus musculus	MEEBO	ILMN_190795	ILMN_190795	TTC13	scl0234875.1_259	XM_358379.1			38089456	XM_358379.1	Ttc13		ILMN_2473348	003800537	S	10	CAGGCACTGGATTACGTTGTGTTTGTGTGCGAGCTAGTTTTGCTTTCAGG										
Mus musculus	MEEBO	ILMN_212926	ILMN_212926	BC003885	scl00225215.2_285	NM_198609.1			38348463	NM_198609.1	BC003885		ILMN_2708397	001660075	S	74	ACCCGGGGCACGGAATGATGTTCGTCCGCAACGATTGCAAGGTGTTCCGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197062	ILMN_197062	LOC380783	XM_358427.1	XM_358427.1			38073729	XM_358427.1	LOC380783		ILMN_1226605	003310450	S	467	ATGAGCCTGTGGGAGGCCATCCTTACTTCAATCAACACAGCCACCATGTC										
Mus musculus	Riken	ILMN_207375	ILMN_207375	C230064B13RIK	ri|C230064B13|PX00667I13|AK082563|1746					AK082563	C230064B13Rik		ILMN_1224675	000380408	S	1292	GGCAAGGCTTAAAGAGGACACCCTATGTCAGGAAAGTGGACATCATGCCC										
Mus musculus	Riken	ILMN_203459	ILMN_203459	CYP2B19	ri|4831430P04|PX00102B09|AK029227|2235					AK029227	Cyp2b19		ILMN_2557468	002120504	S	982	CCATGTCGCAGGTGCACCATGAGTGGACAGTTGGGGGATCTTCAACTCTC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_227084	ILMN_227084	G630016D24RIK	NM_001033805.2	NM_001033805.2		619301	141802807	NM_001033805.2	G630016D24Rik	NP_001028977.1	ILMN_3161676	004560689	S	1080	CAACCCAGAATCCGCGTCGGTTGTGCTCCAGGTCTCCCTTGGATCCGGGT	14	+	52639315-52639364	14qC2	Mus musculus RIKEN cDNA G630016D24 gene (G630016D24Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_197706	ILMN_197706	LOC380991	XM_354901.1	XM_354901.1			38077474	XM_354901.1	LOC380991		ILMN_1247005	004900762	S	83	AGGCCTCAGGTACCAAGAGGGTGATGCTGGAGGACCCAGTCCAAGGATCA										
Mus musculus	RefSeq	ILMN_195969	ILMN_195969	TRIT1	NM_025873.2	NM_025873.2		66966	142354403	NM_025873.2	Trit1	NP_080149.2	ILMN_1234530	000870338	S	1436	TTTGCAGAGACGTGGGGATCAAGCCCAGGAGGGAGGGGAGTGTCGCTCTC	4	+	122731554-122731603	4qD2.2	Mus musculus tRNA isopentenyltransferase 1 (Trit1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: isopentenyl diphosphate + tRNA = diphosphate + tRNA containing 6-isopentenyladenosine [goid 4811] [evidence IEA]	AI314635; 2310075G14Rik; AI314189; AV099619; IPT; MOD5	AI314635; 2310075G14Rik; AI314189; AV099619; IPT; MOD5
Mus musculus	RefSeq	ILMN_223284	ILMN_223284	PARD6G	NM_053117.2	NM_053117.2		93737	31543459	NM_053117.2	Pard6g	NP_444347.2	ILMN_1237631	001190592	S	2557	AGTGTTGTTCCTTCCTTTGGGGAACTGTTTCCTGGGCAGAGGTGGCCTTG	18	+	80315850-80315899	18qE3	Mus musculus par-6 partitioning defective 6 homolog gamma (C. elegans) (Pard6g), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Par6a; 2410049N21Rik	Par6a; 2410049N21Rik
Mus musculus	RefSeq	ILMN_213795	ILMN_213795	LRIG1	NM_008377.2	NM_008377.2		16206	88014688	NM_008377.2	Lrig1	NP_032403.2	ILMN_2640862	003130020	S	4503	CCTTACCGGTGAGACTGGGCTTGGACTGTACAAGACTTGAGTCCTAGACC	6	-	94554936-94554985	6qD2	Mus musculus leucine-rich repeats and immunoglobulin-like domains 1 (Lrig1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LIG-1; D6Bwg0781e; Img	LIG-1; D6Bwg0781e; Img
Mus musculus	RefSeq	ILMN_190765	ILMN_251699	FBXW10	NM_001033669.1	NM_001033669.1		213980	75991691	NM_001033669.1	Fbxw10	NP_001028841.1	ILMN_2473082	007160379	S	826	CCTGTGTCATTCCCAATGTCCAAACATTTAGGTAATAAACTCGGGACTGA	11	+	62664172-62664221	11qB2	Mus musculus F-box and WD-40 domain protein 10 (Fbxw10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SM25H2; HREP; SM2SH2; Fbw10	SM25H2; HREP; SM2SH2; Fbw10
Mus musculus	RefSeq	ILMN_199512	ILMN_199512	LOC382645	XM_356603.4	XM_356603.4		382645	94393177	XM_356603.4	LOC382645	XP_356603.4	ILMN_2535490	000010110	S	43	AAACTGTTCCAGGTCCCCGAGGCTGCCACTGTCAGATGCTATGGCATGAC	12	+	113845280-113845329	12qF1	PREDICTED: Mus musculus similar to transducin-like enhancer protein 6 (LOC382645), mRNA.					
Mus musculus	RefSeq	ILMN_190519	ILMN_240562	FMR1NB	NM_174993.1	NM_174993.1		207854	29135262	NM_174993.1	Fmr1nb	NP_778158.1	ILMN_2630428	003940484	S	495	CTATGCCCCAGTAAGGGACAAGCCTACACAGGTGCTACGGGTGTTTGGCC	X	+	66022249-66022268:66025220-66025249	XqA7.1	Mus musculus fragile X mental retardation 1 neighbor (Fmr1nb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC117577; 3830422N12Rik; NYSAR35; NY-SAR-35	MGC117577; 3830422N12Rik; NYSAR35; NY-SAR-35
Mus musculus	RefSeq	ILMN_190519	ILMN_240562	FMR1NB	NM_174993.1	NM_174993.1		207854	29135262	NM_174993.1	Fmr1nb	NP_778158.1	ILMN_2631829	004640360	S	402	GGTGGTGGCATGTAATAACCAGCCGTATCTTAGCGAGAGTGAATGTTTAA	X	+	66022156-66022205	XqA7.1	Mus musculus fragile X mental retardation 1 neighbor (Fmr1nb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC117577; 3830422N12Rik; NYSAR35; NY-SAR-35	MGC117577; 3830422N12Rik; NYSAR35; NY-SAR-35
Mus musculus	RefSeq	ILMN_217965	ILMN_217965	HSD17B12	NM_019657.2	NM_019657.2		56348	31560410	NM_019657.2	Hsd17b12	NP_062631.1	ILMN_2689908	004280474	S	1578	GTGCCCGGAATGTAGAGGTAAGTGGGCCAAAGTGTACATCAAGACCAACA	2	-	93833747-93833796	2qE1	Mus musculus hydroxysteroid (17-beta) dehydrogenase 12 (Hsd17b12), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]	KIK-I; Kik1; 2610510O05Rik; AI172963	KIK-I; Kik1; 2610510O05Rik; AI172963
Mus musculus	RefSeq	ILMN_189613	ILMN_189613	ZFP322A	NM_172586.2	NM_172586.2		218100	31982559	NM_172586.2	Zfp322a	NP_766174.1	ILMN_2462791	004780398	S	2319	GTGGGTGAGAATCTGTATATATGCTGTTCATAGTTGAACCACATTGTGGA	13	-	23447408-23447457	13qA3.1	Mus musculus zinc finger protein 322a (Zfp322a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	9630054P07Rik; RP23-9O13.9	9630054P07Rik; RP23-9O13.9
Mus musculus	RefSeq	ILMN_200702	ILMN_200702	LOC386531	XM_359374.1	XM_359374.1			38085302	XM_359374.1	LOC386531		ILMN_2539702	007650450	S	184	GAGGAGCCCTGTGAGGAGGGAGGCTTTTTGCAGAGGTTCCACCCGCATCA										
Mus musculus	RefSeq	ILMN_198790	ILMN_198790	LOC244112	XM_145886.2	XM_145886.2			38087707	XM_145886.2	LOC244112		ILMN_1253053	002650669	S	1324	CTAAGGAAATGATGGAGTGGGCGATAGATGTGGATCAGGTATTTAAGTCA										
Mus musculus	Riken	ILMN_203493	ILMN_203493	RECQL	ri|B430304I01|PX00072E01|AK046660|3671					AK046660	Recql		ILMN_1246380	007560484	S	3420	AGAGCTTCAGTGTGGTCCCCCTGGCCGTGTGCTCTATCAGAAGGGAGCAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214669	ILMN_214669	AIFM3	NM_175178.3	NM_175178.3		72168	70778908	NM_175178.3	Aifm3	NP_780387.2	ILMN_2947901	004010333	S	2370	TCTGGGGTACCAAGGTCAGAGACCAAGTCCTGGGGCAAGTGCCAACTCCA	16	+	17507288-17507337	16qA3	Mus musculus apoptosis-inducing factor, mitochondrion-associated 3 (Aifm3), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AI840249; Aifl; 2810401C16Rik	AI840249; Aifl; 2810401C16Rik
Mus musculus	RefSeq	ILMN_199142	ILMN_199142	LOC327956	XM_282996.1	XM_282996.1			28510251	XM_282996.1	LOC327956		ILMN_2534197	006100440	S	400	TTACATTCCCAGGGGACAACACTGGAGTGAACAACGTGCGCTTCCGTTGC										
Mus musculus	Riken	ILMN_206489	ILMN_206489	GTF2E1	ri|D430021C16|PX00194O23|AK084978|3801					AK084978	Gtf2e1		ILMN_2580462	004860475	S	3437	GGCAGCTGTTTGCCAGTGAACAAAAGGATGAACTCCTAGGTGAACTCTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH [goid 5673] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223962	ILMN_246959	OLFR1045	NM_147017.2	NM_147017.2		259019	110735413	NM_147017.2	Olfr1045	NP_667228.2	ILMN_1235994	006270681	S	738	GGCTGTCACAGTTTTCTATGGGACGCTGTTGTTTATGTATTTGCAACCTC	2	-	86038120-86038169	2qD	Mus musculus olfactory receptor 1045 (Olfr1045), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR185-2	MOR185-2
Mus musculus	RefSeq	ILMN_193598	ILMN_193598	TOM1L2	NM_153080.2	NM_153080.2		216810	84875529	NM_153080.2	Tom1l2	NP_694720.2	ILMN_3073318	001940315	I	1377	TTCCCGTTGCGCAGCCCTCTGTCATGGACGACATTGAGGTGTGGCTCAGG	11	-	60046408-60046457	11qB2	Mus musculus target of myb1-like 2 (chicken) (Tom1l2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]		A730055F12Rik; Srebf1; AU042072; 2900016I08Rik; RP23-456O18.4	A730055F12Rik; Srebf1; AU042072; 2900016I08Rik; RP23-456O18.4
Mus musculus	RefSeq	ILMN_193598	ILMN_193598	TOM1L2	NM_153080.2	NM_153080.2		216810	84875529	NM_153080.2	Tom1l2	NP_694720.2	ILMN_2498659	004150379	S	1065	GCGAAGTTACTGAAGACAACTTAATAGACCTGGGCCCCGGCTCCCCCGCT	11	-	60058630-60058679	11qB2	Mus musculus target of myb1-like 2 (chicken) (Tom1l2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]		A730055F12Rik; Srebf1; AU042072; 2900016I08Rik; RP23-456O18.4	A730055F12Rik; Srebf1; AU042072; 2900016I08Rik; RP23-456O18.4
Mus musculus	RefSeq	ILMN_193598	ILMN_193598	TOM1L2	NM_153080.2	NM_153080.2		216810	84875529	NM_153080.2	Tom1l2	NP_694720.2	ILMN_3152137	006220433	A	1197	GTGTCAGTGGCACCCTCAGTTCACTTCAGCAGTGCAAGCCACAAGATGGT	11	-	60056262-60056311	11qB2	Mus musculus target of myb1-like 2 (chicken) (Tom1l2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]		A730055F12Rik; Srebf1; AU042072; 2900016I08Rik; RP23-456O18.4	A730055F12Rik; Srebf1; AU042072; 2900016I08Rik; RP23-456O18.4
Mus musculus	MEEBO	ILMN_192385	ILMN_192385	LPIN2	scl50520.22_31				31543128	NM_022882	Lpin2		ILMN_1220680	004850278	S	3942	CACCTCCCTGGCGGCCTCAGACACTGGCCTCTTTAAGTGCTCTTGTCAAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221225	ILMN_225877	KCNQ1	NM_008434.2	NM_008434.2		16535	70887794	NM_008434.2	Kcnq1	NP_032460.2	ILMN_2732707	006550543	S	106	ATGGACACGGCCTCGTCCCCGCCCAGTGCTGAAAGGAAGCGCGCGGGTTG	7	+	150288210-150288221:150288222-150288259	7qF5	Mus musculus potassium voltage-gated channel, subfamily Q, member 1 (Kcnq1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IMP]; Any mechanism, at the level of transcription or post-transcription, causing long-term gene inactivation [goid 16458] [evidence IMP]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	AW559127; Kcna9; KVLQT1	AW559127; Kcna9; KVLQT1
Mus musculus	RefSeq	ILMN_199542	ILMN_199542	LOC383613	XM_357154.1	XM_357154.1			38074130	XM_357154.1	LOC383613		ILMN_2535593	006450678	S	276	TGTCAACGACCCATTCAGAAGTATGTTTCCATGCCGCCTTCAGCAGGCCG										
Mus musculus	Riken	ILMN_204665	ILMN_204665	9430049I24RIK	ri|9430049I24|PX00109N01|AK034860|2509					AK034860	9430049I24Rik		ILMN_1230031	000830561	S	1991	AAGGTGTGGTTTGTCTGAGGATAAGCTGGTCAGTGGTGTGAAGCACGCGC										
Mus musculus	RefSeq	ILMN_238521	ILMN_238521	GNAS	NR_003258.1	NR_003258.1		14683	117959932	NR_003258.1	Gnas		ILMN_3075080	004180520	I	1	TTTGCGTGTGAGTGCGTCTCACTCACATAGCTAACCCAAGGAGCACCTAA	2	+	174153415-174153442:174153609-174153630	2qH4	Mus musculus GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus (Gnas), transcript variant 9, transcribed RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IMP]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS];  [goid 6112] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1	Gnasxl; P2; PHP1A; P1; GPSA; A930027G11Rik; P3; PHP1B; POH; Oedsml; C130027O20Rik; GSP; Gsa; Nespl; Nesp; Oed-Sml; 5530400H20Rik; MGC118029; Gnas1
Mus musculus	Riken	ILMN_204205	ILMN_204205	RIL-PENDING	ri|9530058N05|PX00113K14|AK035513|1371					AK035513	Ril-pending		ILMN_2563186	001190537	S	1218	TGAGATCAGAGCAGTGACAGGGGAGGTTGGTGAAGGCAGAGGGTGAGCTG										
Mus musculus	RefSeq	ILMN_190777	ILMN_317548	SRP54B	NM_001100109.1	NM_001100109.1		665155	153791788	NM_001100109.1	Srp54b	NP_001093579.1	ILMN_2671777	006620040	S	2730	AATATGTTTTGATAATAGATAATACATAAATTTGCTAATGGAAAGTAATA				12qC1	Mus musculus signal recognition particle 54b (Srp54b), mRNA.					
Mus musculus	RefSeq	ILMN_200952	ILMN_200952	LOC385511	XM_358263.1	XM_358263.1			38087310	XM_358263.1	LOC385511		ILMN_1230334	005890397	S	3586	TGCACACTCCAGTCCTCCTCTTTCAGCGATCCTTACCACCTACGCACCCC										
Mus musculus	RefSeq	ILMN_198279	ILMN_198279	LOC381146	XM_355067.1	XM_355067.1			38083594	XM_355067.1	LOC381146		ILMN_1251693	005820551	S	798	AGGACATTAGGGCTGCACACCGAACCCGAGAGCAACAGCGGTCCCAAGCT										
Mus musculus	MEEBO	ILMN_194372	ILMN_194372	IGSF4A	scl36991.12_218				46575917	NM_018770	Igsf4a		ILMN_2505841	004540612	S	18	TTTCAATTGGTGTTTTTCCGTCTCAGGTAGATTGCAAAGTGTAGGCCCCA										
Mus musculus	Riken	ILMN_206441	ILMN_206441	HGF	ri|C230052L06|PX00175M08|AK082461|3394					AK082461	Hgf		ILMN_2580097	001030274	S	2974	GTGAATAACAGCTCAGTACAGGCCCCACAGCCTTGCACAAACCCTTTGCG							The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The series of molecular signals generated as a consequence of the hepatocyte growth factor receptor binding to one of its physiological ligands [goid 48012] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51450] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221553	ILMN_221553	PSMD12	NM_025894.2	NM_025894.2		66997	141802643	NM_025894.2	Psmd12	NP_080170.1	ILMN_1216211	002340327	S	1147	GGCCAAGTACTACACTCGGATAACAATGAAAAGGATGGCACAACTTCTGG	11	+	107357016-107357065	11qE1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 (Psmd12), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			P55; AI480719; 1500002F15Rik	P55; AI480719; 1500002F15Rik
Mus musculus	RefSeq	ILMN_197308	ILMN_243178	EG622408	NM_001037914.3	NM_001037914.3		622408	146198627	NM_001037914.3	EG622408	NP_001033003.1	ILMN_1222308	004230538	S	732	CTGCCGAGCCCTTCCAGATCAAGGCAACAACGAAAAGGAGCCTGGAGGAG				13qD2.2	Mus musculus predicted gene, EG622408 (EG622408), mRNA.					
Mus musculus	RefSeq	ILMN_210627	ILMN_210627	ATP6AP1	NM_018794.3	NM_018794.3		54411	142378425	NM_018794.3	Atp6ap1	NP_061264.1	ILMN_2607547	006550689	S	2035	GTCAAGAGGCCGGAGGTGTGTGTGGGGGGTTGCTCTGTTGTTTCCTTCCT	X	+	71549435-71549484	XqA7.3	Mus musculus ATPase, H+ transporting, lysosomal accessory protein 1 (Atp6ap1), mRNA.	A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol [goid 5773] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	XAP-3; mFLJ00383; AC45; C7-1; AW108110; 16A; Atp6s1; Atp6ip1; FLJ00383; AI316502; CF2; VATPS1	XAP-3; mFLJ00383; AC45; C7-1; AW108110; 16A; Atp6s1; Atp6ip1; FLJ00383; AI316502; CF2; VATPS1
Mus musculus	RefSeq	ILMN_216789	ILMN_216789	ABCA16	NM_207130.1	NM_207130.1		233810	46369472	NM_207130.1	Abca16	NP_997013.1	ILMN_1228982	005260484	S	4754	GAGGTTTGGTCATGTATACACTCTAACAGTAAGAATCAATATTGCTAAGG	7	+	127684713-127684762	7qF2	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 16 (Abca16), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AY243472	AY243472
Mus musculus	RefSeq	ILMN_213687	ILMN_213687	PCSK2	NM_008792.3	NM_008792.3		18549	37360981	NM_008792.3	Pcsk2	NP_032818.1	ILMN_2721800	005360753	S	2088	CACACAGAGCGCCCCATACATCGATCAGGTGGTGAGGGATTACCAGTCTA	2	+	143639409-143639458	2qG1	Mus musculus proprotein convertase subtilisin/kexin type 2 (Pcsk2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IMP]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IMP]; The formation of mature enkephalin, a pentapeptide hormone involved in regulating pain and nociception in the body by proteolytic processing of enkephalin propeptide [goid 34230] [evidence IDA]; Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein [goid 16540] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 16893422] [evidence IEP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	AI839700; SPC2; Phpp-2; 6330411F23Rik; Nec2; Nec-2; PC2	AI839700; SPC2; Phpp-2; 6330411F23Rik; Nec2; Nec-2; PC2
Mus musculus	RefSeq	ILMN_213687	ILMN_213687	PCSK2	NM_008792.3	NM_008792.3		18549	37360981	NM_008792.3	Pcsk2	NP_032818.1	ILMN_2639674	001170653	S	4505	CTGTCAAGCTAGTGATGTTTTTTATGATGCCCCTGAGTCTGATGCAAGAG	2	+	143641826-143641875	2qG1	Mus musculus proprotein convertase subtilisin/kexin type 2 (Pcsk2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IMP]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IMP]; The formation of mature enkephalin, a pentapeptide hormone involved in regulating pain and nociception in the body by proteolytic processing of enkephalin propeptide [goid 34230] [evidence IDA]; Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein [goid 16540] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 16893422] [evidence IEP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	AI839700; SPC2; Phpp-2; 6330411F23Rik; Nec2; Nec-2; PC2	AI839700; SPC2; Phpp-2; 6330411F23Rik; Nec2; Nec-2; PC2
Mus musculus	RefSeq	ILMN_213687	ILMN_213687	PCSK2	NM_008792.3	NM_008792.3		18549	37360981	NM_008792.3	Pcsk2	NP_032818.1	ILMN_2924391	002370100	S	4499	CACCAACTGTCAAGCTAGTGATGTTTTTTATGATGCCCCTGAGTCTGATG	2	+	143641820-143641869	2qG1	Mus musculus proprotein convertase subtilisin/kexin type 2 (Pcsk2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IMP]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IMP]; The formation of mature enkephalin, a pentapeptide hormone involved in regulating pain and nociception in the body by proteolytic processing of enkephalin propeptide [goid 34230] [evidence IDA]; Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein [goid 16540] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 16893422] [evidence IEP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	AI839700; SPC2; Phpp-2; 6330411F23Rik; Nec2; Nec-2; PC2	AI839700; SPC2; Phpp-2; 6330411F23Rik; Nec2; Nec-2; PC2
Mus musculus	RefSeq	ILMN_213687	ILMN_213687	PCSK2	NM_008792.3	NM_008792.3		18549	37360981	NM_008792.3	Pcsk2	NP_032818.1	ILMN_1244247	003830091	S	2088	GCACACAGAGCGCCCCATACATCGATCAGGTGGTGAGGGATTACCAGTCT	2	+	143639409-143639458	2qG1	Mus musculus proprotein convertase subtilisin/kexin type 2 (Pcsk2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IMP]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IMP]; The formation of mature enkephalin, a pentapeptide hormone involved in regulating pain and nociception in the body by proteolytic processing of enkephalin propeptide [goid 34230] [evidence IDA]; Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein [goid 16540] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 16893422] [evidence IEP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	AI839700; SPC2; Phpp-2; 6330411F23Rik; Nec2; Nec-2; PC2	AI839700; SPC2; Phpp-2; 6330411F23Rik; Nec2; Nec-2; PC2
Mus musculus	RefSeq	ILMN_216150	ILMN_250627	OLFR669	NM_147043.1	NM_147043.1		259045	22203814	NM_147043.1	Olfr669	NP_667254.1	ILMN_2667864	001090682	S	793	CGTTTTGGAGGTCACACCATCCCTCCTTCTCTTCATATCATTGTGGCTAA	7	+	112087834-112087883	7qE3	Mus musculus olfactory receptor 669 (Olfr669), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR34-6; MGC129246	MOR34-6; MGC129246
Mus musculus	RefSeq	ILMN_198570	ILMN_243581	PRKCZ2	XM_994291.1	XM_994291.1		404705	94380064	XM_994291.1	Prkcz2	XP_999385.1	ILMN_1245944	002480630	S	2341	GTTTGAAGGCTTTGAGTACATCAACCCGCTTCTGTTGTGGACACGCCTGT	7	-	28667759-28667808	7qA3	PREDICTED: Mus musculus protein kinase C, zeta 2 (Prkcz2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The formation of an apical junction, a functional unit located near the cell apex at the points of contact between epithelial cells composed of the tight junction, the zonula adherens junction and the desmosomes, by the aggregation, arrangement and bonding together of its constituents [goid 43297] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199261	ILMN_199261	LOC214036	XM_143043.2	XM_143043.2			38093530	XM_143043.2	LOC214036		ILMN_2534613	001770750	S	274	GCTGGGCCATTGGGTGTCATGGGATATTCTTATGCTTGGGAAAGGAGGCA										
Mus musculus	RefSeq	ILMN_188174	ILMN_245334	POFUT2	NM_030262.3	NM_030262.3		80294	87044906	NM_030262.3	Pofut2	NP_084538.2	ILMN_2615547	005560598	S	1250	CCGGTTTTGTGGAGACCAGGAGAAAGCATGTGAGCAGCCCACACACTGGA	10	+	76731362-76731411	10qC1	Mus musculus protein O-fucosyltransferase 2 (Pofut2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose [goid 6004] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an alpha-L-fucosyl residue from GDP- beta-L-fucose to the serine hydroxy group of a protein acceptor [goid 46922] [evidence IEA]	BC003494; C21orf80; MGC25565; MGC6943; FUT13; 2310011G23Rik; AI256847	BC003494; C21orf80; MGC25565; MGC6943; FUT13; 2310011G23Rik; AI256847
Mus musculus	RefSeq	ILMN_261578	ILMN_261578	RBM45	NM_153405.2	NM_153405.2		241490	91064873	NM_153405.2	Rbm45	NP_700454.1	ILMN_3163340	003130301	A	1443	AGTATGCCGATAGAAAGAGCGCCAATGAGGCCATCACAACTCTGCACGGG	2	+	76218481-76218530	2qC3	Mus musculus RNA binding motif protein 45 (Rbm45), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]	Drbp1; G430095G15Rik; Drb1	Drbp1; G430095G15Rik; Drb1
Mus musculus	RefSeq	ILMN_201410	ILMN_240006	LOC665408	XM_976690.1	XM_976690.1		665408	94363796	XM_976690.1	LOC665408	XP_981784.1	ILMN_1222839	002510341	S	441	GGAGATGGCTCCCCAGGAACAGTTGTTTAGAGAGATGACTGTGGGTGTGC	1	+	87343705-87343729:87344285-87344309		PREDICTED: Mus musculus similar to SP140 nuclear body protein (predicted) (LOC665408), mRNA.					
Mus musculus	RefSeq	ILMN_222874	ILMN_222874	PKM2	NM_011099.2	NM_011099.2		18746	31981561	NM_011099.2	Pkm2	NP_035229.2	ILMN_2756041	003780291	S	1884	CAGAAGGGCGGCAGCATCTCTGGGCTTTGCTTCTGTAGAAAGTTGTCAGA	9	+	59526874-59526923	9qB	Mus musculus pyruvate kinase, muscle (Pkm2), mRNA. XM_979725 XM_979753 XM_979779 XM_979805 XM_979833 XM_979863 XM_979890 XM_979922 XM_979949	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IDA]	AA414905; AL024370; Pk-3; Pk3; Pk-2; AL024424	AA414905; AL024370; Pk-3; Pk3; Pk-2; AL024424
Mus musculus	RefSeq	ILMN_216022	ILMN_216022	5730410I19RIK	NM_025666.1	NM_025666.1		66622	29789153	NM_025666.1	5730410I19Rik	NP_079942.1	ILMN_2809436	003850632	S	2980	CCAGCCTATGTTGAAGGGCTTGCATAAGAAAGGTTCCCTACTTAACCAGA	12	+	103178484-103178533	12qE	Mus musculus RIKEN cDNA 5730410I19 gene (5730410I19Rik), mRNA.				AW557761; AA589405	AW557761; AA589405
Mus musculus	Riken	ILMN_205022	ILMN_205022	LY9	ri|A430085E05|PX00138B07|AK040306|1584					AK040306	Ly9		ILMN_1213156	002710086	S	1466	CCTGCCGGCTCTCTTCCCTGTCTACATCCAAGGCTACACAGCAGGTTGGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200966	ILMN_233371	LOC546006	XM_915703.3	XM_915703.3		546006	149258027	XM_915703.3	LOC546006	XP_920796.3	ILMN_1250988	002650519	S	3450	CCAGGAAGGCTGCATCAAAGACAGTTCCTACTCCAACCTCCATGCTCCCG				7qF3	PREDICTED: Mus musculus similar to deleted in malignant brain tumors 1 (LOC546006), mRNA.					
Mus musculus	MEEBO	ILMN_213730	ILMN_213730	TAF1A	scl0021339.1_180	NM_021466.1			10946859	NM_021466.1	Taf1a		ILMN_2640188	002760075	S	2196	TAAAGTGACTAGTACTTGGATTCCAGGAAGGCTCACTGGGGCTCAGGAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase I (Pol I), originating at a Pol I-specific promoter [goid 6360] [evidence TAS]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase I transcription [goid 3701] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221209	ILMN_221209	NUP62	NM_053074.1	NM_053074.1		18226	16716348	NM_053074.1	Nup62	NP_444304.1	ILMN_1235500	004070209	S	2238	CTGAATATCCCAGTGTCAAACCTATCTTAGATCCACAGTGGTGAAGCTGG	7	+	52086030-52086079	7qB4	Mus musculus nucleoporin 62 (Nup62), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IDA]	The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity [goid 42059] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence NAS]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]	Interacting selectively with a phosphotyrosine-binding (PTB) domain of a protein [goid 51425] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The action of a molecule that contributes to the structural integrity of the nuclear pore complex [goid 17056] [evidence IEA]	Nupc1; D7Ertd649e; MGC101995; AU045898; p62; AA589433; AI790512; AI426861	Nupc1; D7Ertd649e; MGC101995; AU045898; p62; AA589433; AI790512; AI426861
Mus musculus	Riken	ILMN_204377	ILMN_204377	9630055A16RIK	ri|9630055A16|PX00117E04|AK036303|1396					AK036303	9630055A16Rik		ILMN_2564506	004230110	S	1306	GTGCCTTGTTTTCCAGAAGGGGAATGTCTGGTGAAAGGCCGCTAGTGAGC										
Mus musculus	RefSeq	ILMN_214111	ILMN_214111	HYAL1	NM_008317.4	NM_008317.4		15586	145966880	NM_008317.4	Hyal1	NP_032343.2	ILMN_2644375	003180097	S	1843	TTCACTTACCTCACACAAGCTACCCAGCCACTGAGGGTTGCCCAGCAAGA				9qF1	Mus musculus hyaluronoglucosaminidase 1 (Hyal1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Hya1; Hyal-1	Hya1; Hyal-1
Mus musculus	Riken	ILMN_205682	ILMN_205682	D630035E14RIK	ri|D630035E14|PX00197K14|AK052722|2394					AK052722	D630035E14Rik		ILMN_2574443	000630563	S	1729	AACTCTGCTGGAGCTTCCTGTGCTGGGAATGTGCTGGGCCTTCCGGTCCT										
Mus musculus	Riken	ILMN_206800	ILMN_206800	A430093P11RIK	ri|A430093P11|PX00139O10|AK079858|1038					AK079858	A430093P11Rik		ILMN_2582781	006450014	S	914	AACCAAACATAGAGGGTAGCCAGATCGTCAGGCCTGATAGAAGCTGATGG										
Mus musculus	MEEBO	ILMN_188488	ILMN_188488	D12WSU95E	scl42759.15_161				39930558	NM_198023	D12Wsu95e		ILMN_1224518	004570400	S	3	CTCTGCTTGTTTTCTAGTTCAGCACAGTCATTGTGGTGAATGTCCATAGC										
Mus musculus	RefSeq	ILMN_226734	ILMN_226734	KCNQ5	NM_023872.2	NM_023872.2		226922	118130673	NM_023872.2	Kcnq5	NP_076361.1	ILMN_2798606	005220093	S	2633	GTGCCGAAGAGACAGAAACAGATACTTTTGACGGCACCCCACCGCCTGCG	1	-	21392363-21392412	1qA4	Mus musculus potassium voltage-gated channel, subfamily Q, member 5 (Kcnq5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IDA]	D1Mgi1; 7730402H11; AA589396; 9230107O05Rik	D1Mgi1; 7730402H11; AA589396; 9230107O05Rik
Mus musculus	RefSeq	ILMN_196877	ILMN_226734	KCNQ5	NM_023872.2	NM_023872.2		226922	118130673	NM_023872.2	Kcnq5	NP_076361.1	ILMN_1239906	001440427	S	1398	GAGCTTCAACGACCGAACCCGCTTCAGGCCCTCACTACGGCTCAAGAGTT	1	-	21447508-21447557	1qA4	Mus musculus potassium voltage-gated channel, subfamily Q, member 5 (Kcnq5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IDA]	D1Mgi1; 7730402H11; AA589396; 9230107O05Rik	D1Mgi1; 7730402H11; AA589396; 9230107O05Rik
Mus musculus	RefSeq	ILMN_217520	ILMN_310712	LOC100045268	XM_001474162.1	XM_001474162.1		100045268	149264782	XM_001474162.1	LOC100045268	XP_001474212.1	ILMN_1248969	002490376	S	775	CCTCTCAGATAAACACCTCAATTGGATAAAGAAGATTATGAAGGGTTCTG					PREDICTED: Mus musculus similar to precursor (AA -28 to 232) (LOC100045268), mRNA.					
Mus musculus	RefSeq	ILMN_219365	ILMN_219365	GALR1	NM_008082.2	NM_008082.2		14427	110665712	NM_008082.2	Galr1	NP_032108.1	ILMN_2707749	002810092	S	1906	CTGTATAGTTTCTAGCTCTCAAGGAATGAAAGTCCTACAGCACTCTGCAA	18	-	82562803-82562852	18qE3	Mus musculus galanin receptor 1 (Galr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with galanin to initiate a change in cell activity [goid 4966] [evidence TAS]	Galnr1	Galnr1
Mus musculus	RefSeq	ILMN_224875	ILMN_224875	KCNQ4	NM_001081142.1	NM_001081142.1		60613	124487266	NM_001081142.1	Kcnq4	NP_001074611.1	ILMN_3105727	001170673	A	2011	AGCCCTGTAGACCACGAGGACATCTCTGTCTCCGCACAGACGCTCAGCAT	4	-	120370529-120370578	4qD2.2	Mus musculus potassium voltage-gated channel, subfamily Q, member 4 (Kcnq4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IMP]		
Mus musculus	RefSeq	ILMN_188181	ILMN_227844	HSPA8	NM_031165.4	NM_031165.4		15481	110681696	NM_031165.4	Hspa8	NP_112442.2	ILMN_1249586	001850270	S	1860	GCATCAGCAGAAAGAACTGGAGAAAGTCTGCAACCCTATCATTACCAAGC	9	+	40613038-40613087	9qA5.1	Mus musculus heat shock protein 8 (Hspa8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IDA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive some other reaction, for example ion transport across a membrane [goid 42623] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IPI]	MGC106514; MGC102007; Hsc70; 2410008N15Rik; MGC118485; Hsc71; Hspa10; Hsp73; Hsc73	MGC106514; MGC102007; Hsc70; 2410008N15Rik; MGC118485; Hsc71; Hspa10; Hsp73; Hsc73
Mus musculus	RefSeq	ILMN_227844	ILMN_227844	HSPA8	NM_031165.4	NM_031165.4		15481	110681696	NM_031165.4	Hspa8	NP_112442.2	ILMN_2918479	002030593	S	25	TGCCTGGCATTTGTGTGGTCTCGTCGTCAGCGCAGCTGGGCCTACACACA	9	+	40609380-40609429	9qA5.1	Mus musculus heat shock protein 8 (Hspa8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IDA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive some other reaction, for example ion transport across a membrane [goid 42623] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IPI]	MGC106514; MGC102007; Hsc70; 2410008N15Rik; MGC118485; Hsc71; Hspa10; Hsp73; Hsc73	MGC106514; MGC102007; Hsc70; 2410008N15Rik; MGC118485; Hsc71; Hspa10; Hsp73; Hsc73
Mus musculus	RefSeq	ILMN_188181	ILMN_227844	HSPA8	NM_031165.4	NM_031165.4		15481	110681696	NM_031165.4	Hspa8	NP_112442.2	ILMN_1246458	004920139	S	1899	CATTACCAAGCTGTACCAGAGTGCAGGTGGCATGCCTGGGGGAATGCCTG	9	+	40613077-40613126	9qA5.1	Mus musculus heat shock protein 8 (Hspa8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IDA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive some other reaction, for example ion transport across a membrane [goid 42623] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IPI]	MGC106514; MGC102007; Hsc70; 2410008N15Rik; MGC118485; Hsc71; Hspa10; Hsp73; Hsc73	MGC106514; MGC102007; Hsc70; 2410008N15Rik; MGC118485; Hsc71; Hspa10; Hsp73; Hsc73
Mus musculus	MEEBO	ILMN_190918	ILMN_190918	4930488L10RIK	scl43138.14.1_290				34328509	NM_028127	4930488L10Rik		ILMN_1231436	004610243	S	1	CCGGGTTCATGATGCTAGACCGACCTTGATTCTCCTACCCATTCTATTTA										
Mus musculus	MEEBO	ILMN_190918	ILMN_190918	4930488L10RIK	scl43138.14.1_290				34328509	NM_028127	4930488L10Rik		ILMN_1213405	001430152	S	481	AAAGGAGGCCAGCAAGGTACGGCAATACGAAGTCACTTGGGGCATCGACC										
Mus musculus	MEEBO	ILMN_190918	ILMN_190918	4930488L10RIK	scl43138.14.1_290				34328509	NM_028127	4930488L10Rik		ILMN_2678012	005910095	S	488	GCCAGCAAGGTACGGCAATACGAAGTCACTTGGGGCATCGACCAGTTTGG										
Mus musculus	RefSeq	ILMN_215886	ILMN_215886	OLFR589	NM_147052.1	NM_147052.1		259054	22128850	NM_147052.1	Olfr589	NP_667263.1	ILMN_1223408	002510360	S	626	TGTTTGACATAGTAGCAATTGTTCTTTCTTACATACAAATATTACGTGTT	7	-	110303584-110303633	7qE3	Mus musculus olfactory receptor 589 (Olfr589), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR32-3	MOR32-3
Mus musculus	RefSeq	ILMN_199435	ILMN_199435	MRGPRA5	NM_207534.1	NM_207534.1		404235	46430523	NM_207534.1	Mrgpra5	NP_997417.1	ILMN_2992572	000060167	S	457	AGAGCATACCTGATGTTTTTGTTTGTGGTCCTTTGTCTGTCCAGCATGGC	7	-	47370832-47370881		Mus musculus MAS-related GPR, member A5 (Mrgpra5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgA5	MrgA5
Mus musculus	RefSeq	ILMN_199435	ILMN_199435	MRGPRA5	NM_207534.1	NM_207534.1		404235	46430523	NM_207534.1	Mrgpra5	NP_997417.1	ILMN_2535197	001090465	S	192	CTTTTCTGGGTACTTTTACACCATCATGACGGTTCCCTACATCGCAGGCC	7	-	47424016-47424065		Mus musculus MAS-related GPR, member A5 (Mrgpra5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgA5	MrgA5
Mus musculus	RefSeq	ILMN_246373	ILMN_246373	ZFP472	NM_153063.1	NM_153063.1		224691	23346458	NM_153063.1	Zfp472	NP_694703.1	ILMN_2932722	001190768	S	1805	GATGGCAACCTGTACAACAGGTTTTGCTGCTGCGTGTCTTTTGTTCCAGT	17	+	32717108-32717157	17qB1	Mus musculus zinc finger protein 472 (Zfp472), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	KRIM-1; Krim-1A; Krim1; Krim-1B	KRIM-1; Krim-1A; Krim1; Krim-1B
Mus musculus	RefSeq	ILMN_211026	ILMN_211026	PCDHGA10	NM_033593.3	NM_033593.3		93722	148540160	NM_033593.3	Pcdhga10	NP_291071.1	ILMN_1228667	005310224	S	2367	GTCTTTGTTAGATGATTCCAAGTGTCCTGTAGAAGACGCTCCTTTGGTGC				18qB3	Mus musculus protocadherin gamma subfamily A, 10 (Pcdhga10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192448	ILMN_241136	HIST3H2A	NM_178218.3	NM_178218.3		319162	142376228	NM_178218.3	Hist3h2a	NP_835736.1	ILMN_2629289	004570438	S	1898	GCAGCTCATAAGTTGCCCTGTCATATGTGGCTAGTGAATAACTAGAGAGC	11	+	58770084-58770133	11qB1.3	Mus musculus histone cluster 3, H2a (Hist3h2a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218719	ILMN_218719	1190005I06RIK	NM_197988.1	NM_197988.1		68918	37574065	NM_197988.1	1190005I06Rik	NP_932105.1	ILMN_2699367	002230019	S	522	ATCCGTGGCCTCTGAGTCCGCACCAACCCAGACCCCGGCTTGGTGAAGAG	8	-	123132664-123132713	8qE1	Mus musculus RIKEN cDNA 1190005I06 gene (1190005I06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_194315	ILMN_194315	UBTF	NM_011551.5	NM_011551.5		21429	113205056	NM_011551.5	Ubtf	NP_035681.2	ILMN_2506061	003290768	S	1024	GCTCTCGGACAAAAAGAGGCTGAAATGGATTCATAAGGCCCTGGAGCAGC	11	-	102172253-102172302	11qD	Mus musculus upstream binding transcription factor, RNA polymerase I (Ubtf), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	UBF; A930005G04Rik; UBF1; Tcfubf; NOR-90	UBF; A930005G04Rik; UBF1; Tcfubf; NOR-90
Mus musculus	MEEBO	ILMN_184636	ILMN_184636	IGHV1S33_X02465_IG_HEAVY_VARIABLE_1S33_145	IGHV1S33_X02465_Ig_heavy_variable_1S33_145						IGHV1S33_X02465_Ig_heavy_variable_1S33_145		ILMN_2420275	000010563	S	16	GTACTAAGTACAATGAGAAATTCAAGGGCAAGGCCACACTGACTGCAGAC										
Mus musculus	RefSeq	ILMN_223652	ILMN_223652	EG330602	NM_183313.1	NM_183313.1		330602	34303996	NM_183313.1	EG330602	NP_899136.1	ILMN_2767162	006370142	S	2760	CTTGTTATCTGGGCTGTCAGGGGGTTGAGCTTTGGGGAGATTTCAGATCA	7	-	107078580-107078629	7qE2	Mus musculus predicted gene, EG330602 (EG330602), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	D930018N13	D930018N13
Mus musculus	RefSeq	ILMN_199851	ILMN_199851	LOC383988	XM_357365.1	XM_357365.1			38078107	XM_357365.1	LOC383988		ILMN_1228240	003120612	S	75	TCACTACCCACACCCAAGACGGCTGGAGAGAGAGGATGCAGTGAAGTCTC										
Mus musculus	Riken	ILMN_201927	ILMN_201927	5430420C16RIK	ri|5430420C16|PX00022C18|AK017323|1189					AK017323	5430420C16Rik		ILMN_1219192	001240408	S	813	GTGCTGCTGAGGCGGAGCTGAATCTCAGGATGGATGCTAGGATGCTGGTT										
Mus musculus	RefSeq	ILMN_191767	ILMN_234457	SMYD1	NM_009762.1	NM_009762.1		12180	10257424	NM_009762.1	Smyd1	NP_033892.1	ILMN_2647605	000670762	S	1865	GCTGGTCTCATCTACAGTTATGAATATTTAGGTTTTGCAGACTGGGGTGG	6	-	71165313-71165362	6qC1	Mus musculus SET and MYND domain containing 1 (Smyd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IPI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]	C78565; Bop; 4632404M21Rik; Zmynd18	C78565; Bop; 4632404M21Rik; Zmynd18
Mus musculus	RefSeq	ILMN_211874	ILMN_211874	CYP27A1	NM_024264.4	NM_024264.4		104086	142367423	NM_024264.4	Cyp27a1	NP_077226.2	ILMN_2620326	002940170	S	1650	GAGACAGTAGTACCGAGCTGGGCTCCCGCCTTCATGGAGCTCGTCCAGAA	1	+	74784224-74784233:74784234-74784273	1qC3	Mus musculus cytochrome P450, family 27, subfamily a, polypeptide 1 (Cyp27a1), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: 5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol + NADPH + O2 = 5-beta-cholestane-3-alpha,7-alpha,12-alpha,26-tetraol + NADP+ + H2O [goid 47749] [evidence IEA]	Cyp27; 1300013A03Rik	Cyp27; 1300013A03Rik
Mus musculus	RefSeq	ILMN_217063	ILMN_217063	GLIPR1	NM_028608.2	NM_028608.2		73690	142344983	NM_028608.2	Glipr1	NP_082884.1	ILMN_1215807	002810685	S	929	CTAAAGCTGTGGTTGGGGGACAACTGAATCACATGCGGCTATTTAAAAAC	10	-	111422537-111422583:111422584-111422586	10qD2	Mus musculus GLI pathogenesis-related 1 (glioma) (Glipr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			RTVP1; RTVP-1; mRTVP-1; 2410114O14Rik	RTVP1; RTVP-1; mRTVP-1; 2410114O14Rik
Mus musculus	RefSeq	ILMN_220302	ILMN_220302	CFHR1	NM_015780.1	NM_015780.1		50702	7656968	NM_015780.1	Cfhr1	NP_056595.1	ILMN_2735449	004560382	S	1479	AGGACAAACTATGTCAAACAAGAAAATTTGATGTAAGTTTTTCAGCATTG	1	-	141443844-141443893	1qF	Mus musculus complement factor H-related 1 (Cfhr1), mRNA.				Cfhl1; MGC130590; AI194696; CFHRB	Cfhl1; MGC130590; AI194696; CFHRB
Mus musculus	RefSeq	ILMN_220302	ILMN_220302	CFHR1	NM_015780.1	NM_015780.1		50702	7656968	NM_015780.1	Cfhr1	NP_056595.1	ILMN_2720352	002320750	S	421	CAATCAAGGCTACAGCCTTCAGAATAATCAGAGCACCATCACCTGTGCTG	1	-	141452947-141452996	1qF	Mus musculus complement factor H-related 1 (Cfhr1), mRNA.				Cfhl1; MGC130590; AI194696; CFHRB	Cfhl1; MGC130590; AI194696; CFHRB
Mus musculus	RefSeq	ILMN_220302	ILMN_220302	CFHR1	NM_015780.1	NM_015780.1		50702	7656968	NM_015780.1	Cfhr1	NP_056595.1	ILMN_2881864	006900164	S	1251	GGTGCTGGGATTAAAGGCGTGCACCAACACTGCCTGCTGATTTTATTGCT	1	-	141444072-141444121	1qF	Mus musculus complement factor H-related 1 (Cfhr1), mRNA.				Cfhl1; MGC130590; AI194696; CFHRB	Cfhl1; MGC130590; AI194696; CFHRB
Mus musculus	RefSeq	ILMN_261088	ILMN_261088	NKX2-2	NM_001077632.1	NM_001077632.1		18088	117647244	NM_001077632.1	Nkx2-2	NP_001071100.1	ILMN_3129849	006760746	A	866	TGGCCAGCCTCATCCGTCTCACGCCGACACAGGTCAAGATCTGGTTCCAG	2	-	147010021-147010070	2qG2	Mus musculus NK2 transcription factor related, locus 2 (Drosophila) (Nkx2-2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IMP]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IMP]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of oligodendrocytes. Oligodendrocytes are non-neuronal cells. The primary function of oligodendrocytes is the myelination of nerve axons in the central nervous system. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21529] [evidence IMP]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of oligodendrocytes. Oligodendrocytes are non-neuronal cells. The primary function of oligodendrocytes is the myelination of nerve axons in the central nervous system. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21529] [evidence IGI]; The process whereby a cell becomes capable of differentiating autonomously into an oligodendrocyte in an environment that is neutral with respect to the developmental pathway [goid 21530] [evidence IDA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The process whereby a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed [goid 48665] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Nkx-2.2; Nkx2.2; tinman	Nkx-2.2; Nkx2.2; tinman
Mus musculus	MEEBO	ILMN_221653	ILMN_221653	OLFR118	scl0404308.1_196	XM_111714.3			38082342	XM_111714.3	Olfr118		ILMN_1235927	002940059	S	810	GGCTCAGGATCTATTACCTACTTGAGGCCCAAATCTAGCCACTTACCAGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_219235	ILMN_219235	2010002N04RIK	NM_134133.2	NM_134133.2		106878	125991226	NM_134133.2	2010002N04Rik	NP_598894.1	ILMN_2706014	000520025	S	1826	TAGCATAGATTTTGGGATAGTATTATGTCAGACGTTGCTTACTCTGATCT	18	-	60633955-60634004	18qD3	Mus musculus RIKEN cDNA 2010002N04 gene (2010002N04Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW561905; AI195350; Nid67; cI-41	AW561905; AI195350; Nid67; cI-41
Mus musculus	Riken	ILMN_204787	ILMN_204787	D230021J12RIK	ri|D230021J12|PX00188F14|AK051942|2718					AK051942	D230021J12Rik		ILMN_1214184	000520092	S	2458	CCCCATCGCCAGACAGTTGAGAATCCATAGGAGACAGGAGCAATGGCAGG										
Mus musculus	RefSeq	ILMN_198216	ILMN_249941	EG668716	XR_002270.2	XR_002270.2		668716	149268908	XR_002270.2	EG668716		ILMN_1221092	000730563	S	2446	ACCGGACAATCCATAAGAAGTCAAGAGGGAGTGAGATGGAAGAAGAGAAC	17	+	74613370-74613419	17qE2	PREDICTED: Mus musculus predicted gene, EG668716 (EG668716), misc RNA.					
Mus musculus	RefSeq	ILMN_244170	ILMN_244170	EG433923	NM_001081233.1	NM_001081233.1		433923	124486992	NM_001081233.1	EG433923	NP_001074702.1	ILMN_2905386	003830309	S	300	ACCTGGCCAATGTCATCAGATACTTCCCCACCCAGGCTCTCAACTTTTCC	5	+	97694067-97694116	5qE3	Mus musculus predicted gene, EG433923 (EG433923), mRNA.					
Mus musculus	RefSeq	ILMN_219850	ILMN_219850	NPVF	NM_021892.1	NM_021892.1		60531	11230795	NM_021892.1	Npvf	NP_068692.1	ILMN_2714406	004150358	S	246	AGTGCCCCACTCAGCAGCCAACCTGCCCCTGAGATTTGGAAGGACCATAG	6	-	50602712-50602761	6qB2.3	Mus musculus neuropeptide VF precursor (Npvf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]		Rfrp	Rfrp
Mus musculus	RefSeq	ILMN_216475	ILMN_216475	EXOD1	NM_027698.4	NM_027698.4		71151	148540103	NM_027698.4	Exod1	NP_081974.3	ILMN_1221039	003610681	S	2209	CGGAGCAGTTCATACAAACAGAAGGGACATGTCTTTCATGGCGTGCACTC				7qF2	Mus musculus exonuclease domain containing 1 (Exod1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4933424N09Rik; mKIAA1504	4933424N09Rik; mKIAA1504
Mus musculus	RefSeq	ILMN_218985	ILMN_218985	D15MGI27	NM_134100.2	NM_134100.2		106073	31981640	NM_134100.2	D15Mgi27	NP_598861.1	ILMN_2854347	002810088	S	1653	GGGAAGGACATGGGGGTGACAGACTGGAAAGGTGCCAAAAGCTGACAGTG	15	+	102109687-102109736	15qF3	Mus musculus DNA Segment, Chr 15, Mouse Genome Informatics 27 (D15Mgi27), mRNA.				AW556797	AW556797
Mus musculus	MEEBO	ILMN_218964	ILMN_218964	ANGPTL1	scl072713.3_270	NM_028333.1			13386303	NM_028333.1	Angptl1		ILMN_1218516	005090121	S	1219	CTTAGTAAGTCCTACTTCTTATGTGCTGATGCCATTATACATGTCCAATC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IPI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]		
Mus musculus	RefSeq	ILMN_215392	ILMN_215392	MADD	NM_145527.3	NM_145527.3		228355	117647239	NM_145527.3	Madd	NP_663502.3	ILMN_1256376	006280594	S	5948	CTCCACATTATTTATAGAAAAATGTACAGCTGTGTGATGTGAAATAAATG	2	-	90977528-90977577	2qE1	Mus musculus MAP-kinase activating death domain (Madd), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rab family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 17112] [evidence IMP]	IG20; 9630059K23Rik	IG20; 9630059K23Rik
Mus musculus	RefSeq	ILMN_215392	ILMN_215392	MADD	NM_145527.3	NM_145527.3		228355	117647239	NM_145527.3	Madd	NP_663502.3	ILMN_2658931	000150192	S	3908	GGGCCACTCTGTCCGACAGTGAAATCGAAACCAATTCTGCTACAAGCGCC	2	-	90998147-90998196	2qE1	Mus musculus MAP-kinase activating death domain (Madd), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rab family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 17112] [evidence IMP]	IG20; 9630059K23Rik	IG20; 9630059K23Rik
Mus musculus	RefSeq	ILMN_219395	ILMN_215392	MADD	NM_145527.3	NM_145527.3		228355	117647239	NM_145527.3	Madd	NP_663502.3	ILMN_2708263	004780224	S	4749	GCTGTACTACTGTGTGAAGGACAGCATGGAACGTGCTGCTGCCCGACAGC	2	-	90983186-90983235	2qE1	Mus musculus MAP-kinase activating death domain (Madd), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rab family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 17112] [evidence IMP]	IG20; 9630059K23Rik	IG20; 9630059K23Rik
Mus musculus	MEEBO	ILMN_212755	ILMN_212755	2010007L08RIK	scl070114.1_66				51772139	XM_489353	2010007L08Rik		ILMN_2629923	002680324	S	1199	GACAGTTTCCAGGACTTGTATCTGCCTGCTTTTAGCAAAGGGGATGCTCA										
Mus musculus	MEEBO	ILMN_190472	ILMN_190472	23309032_1	23309032_1						23309032_1		ILMN_2470464	007330280	S	19	ATGGCTCGCGCTGCGTTCCTATTCAAGACTGTTGGGTTTGGTGGTCTGCA										
Mus musculus	RefSeq	ILMN_187137	ILMN_246720	SLC18A2	NM_172523.2	NM_172523.2		214084	142353800	NM_172523.2	Slc18a2	NP_766111.1	ILMN_2739303	004480192	S	3343	TGATTCCTGTCATTTCTGCTTTTGAGGCTTCAGTTTCAGTAAAAACGATC	19	+	59370091-59370140	19qD3	Mus musculus solute carrier family 18 (vesicular monoamine), member 2 (Slc18a2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism [goid 16265] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC90556; 9330105E13; Vmat2; 1110037L13Rik	MGC90556; 9330105E13; Vmat2; 1110037L13Rik
Mus musculus	RefSeq	ILMN_197785	ILMN_197785	LOC229958	XM_143622.1	XM_143622.1			20821030	XM_143622.1	LOC229958		ILMN_2529354	004180291	S	167	AAAACTGTGGCATCCATGTTCTAGATCTGCCATACAACGACGGAGCCCCG										
Mus musculus	RefSeq	ILMN_221117	ILMN_221117	OLFR816	NM_146672.1	NM_146672.1		258667	33239333	NM_146672.1	Olfr816	NP_666883.1	ILMN_2731239	006380220	S	680	CTTCAACCGAACAGAGGAAGAAGGCTTTCTCTACATGCTCTTCCCACATG	10	-	129348603-129348652	10qD3	Mus musculus olfactory receptor 816 (Olfr816), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR113-1	MOR113-1
Mus musculus	RefSeq	ILMN_231091	ILMN_231091	FBXO15	NM_015798.1	NM_015798.1		50764	74959741	NM_015798.1	Fbxo15	NP_056613.1	ILMN_2987637	002630446	S	1337	GACCTTGCTGGATGAGGACAAGAAGCCCATCTGGTATGTGAGTTCTCCAG	18	+	85115336-85115385	18qE4	Mus musculus F-box protein 15 (Fbxo15), mRNA.	A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1) [goid 19005] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IC ]	Fbx15; ecat3; AU019763	Fbx15; ecat3; AU019763
Mus musculus	RefSeq	ILMN_202942	ILMN_314190	ENSMUSG00000056391	XM_001479676.1	XM_001479676.1		791312	149263189	XM_001479676.1	ENSMUSG00000056391	XP_001479726.1	ILMN_1250705	002190370	S	2037	CAAAAGCAGGAAGCTGGAAGGCCCGGAAGCCAGAGCGTCACACAGAAAGC				12qC2	PREDICTED: Mus musculus predicted gene, ENSMUSG00000056391 (ENSMUSG00000056391), mRNA.					
Mus musculus	RefSeq	ILMN_189869	ILMN_189869	WBSCR22	NM_025375.2	NM_025375.2		66138	125988404	NM_025375.2	Wbscr22	NP_079651.2	ILMN_1252719	001190239	S	351	TGCTAGGGGACATGGGCCAGGGCGTCCCTTTCAGACCGGGCTCTTTTGAT	5	-	135536614-135536663	5qG2	Mus musculus Williams Beuren syndrome chromosome region 22 (Wbscr22), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC144443; 1110003N24Rik; MGC144442	MGC144443; 1110003N24Rik; MGC144442
Mus musculus	RefSeq	ILMN_189869	ILMN_189869	WBSCR22	NM_025375.2	NM_025375.2		66138	125988404	NM_025375.2	Wbscr22	NP_079651.2	ILMN_1250081	007570070	S	1007	GGGACCTGCCTCTGGGGAATTCTCTGGACTGAACTGTTTACCTCAGCAGC	5	-	135529078-135529127	5qG2	Mus musculus Williams Beuren syndrome chromosome region 22 (Wbscr22), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC144443; 1110003N24Rik; MGC144442	MGC144443; 1110003N24Rik; MGC144442
Mus musculus	RefSeq	ILMN_208812	ILMN_208812	FAM179A	NM_177087.4	NM_177087.4		320159	145587097	NM_177087.4	Fam179a	NP_796061.2	ILMN_2589770	003890228	S	3251	GGGACTTTTAGCCTCTGAATCTCTGGGGGCCAACGACAAGGTCATAGGTG				17qE1.3	Mus musculus family with sequence similarity 179, member A (Fam179a), mRNA.					
Mus musculus	MEEBO	ILMN_210558	ILMN_210558	CMAH	scl0003695.1_31	NM_007717.1			6680949	NM_007717.1	Cmah		ILMN_2626252	002750082	S	1781	AACTCCCTCTAACACCACCCAACTGGAAGTCGTTCCTAATGCACTGTGAT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving CMP-N-acetylneuraminate, a substance composed of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid in glycosidic linkage with cytidine monophosphate [goid 46381] [evidence IDA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + NADPH + H+ + O2 = CMP-N-glycoloylneuraminate + NADP+ + H2O [goid 30338] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210558	ILMN_210558	CMAH	scl0003695.1_31	NM_007717.1			6680949	NM_007717.1	Cmah		ILMN_2606825	003140441	S	563	GAATGGTATTTGACCCTTGGTTAATTGGCCCTGCTTTTGCCCGAGGATGG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving CMP-N-acetylneuraminate, a substance composed of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid in glycosidic linkage with cytidine monophosphate [goid 46381] [evidence IDA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + NADPH + H+ + O2 = CMP-N-glycoloylneuraminate + NADP+ + H2O [goid 30338] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194325	ILMN_194325	MKIAA0728	scl000827.1_10				37360065	AK129201	mKIAA0728		ILMN_1230419	003420072	S	7	TCACCAATCACAGCAAACAGTTACACCAGGCCGTTAGCATTGGCCAGTCC										
Mus musculus	RefSeq	ILMN_218808	ILMN_218808	PCDHGC4	NM_033582.2	NM_033582.2		93707	40789290	NM_033582.2	Pcdhgc4	NP_291060.1	ILMN_2700468	005260563	S	2727	GGTCAGAAGATCCTATCAAGTTTGTTGACGTGGGAGGCCACTCTCATGGC	18	+	37977459-37977508	18qB3	Mus musculus protocadherin gamma subfamily C, 4 (Pcdhgc4), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_206127	ILMN_206127	C630032P22RIK	ri|C630032P22|PX00084F21|AK083277|3316					AK083277	C630032P22Rik		ILMN_1233601	004260379	S	3137	GTAAGTGTTGGTGAGGATGTGGGGAGCAGACCCATGTGCACAGTTGATGG										
Mus musculus	MEEBO	ILMN_194960	ILMN_194960	SCL0002785.1_49	scl0002785.1_49	AK077020.1			26345839	AK077020.1	scl0002785.1_49		ILMN_2511249	004280079	S	15	ACTTAGCCCCTGAAGAGGCTGCCGGAACCCAGCGGCCCAAGAACCTGATG										
Mus musculus	MEEBO	ILMN_209028	ILMN_209028	4930414F18RIK	scl48749.9.1_16				51769338	XM_488766	4930414F18Rik		ILMN_2591871	001850132	S	1223	CTAATTGGCTGCTCTGACGCCCCCTGGGATGCATGGAGTCAGGATTGTAG										
Mus musculus	RefSeq	ILMN_219381	ILMN_240793	KCNH8	NM_001031811.1	NM_001031811.1		211468	73532781	NM_001031811.1	Kcnh8	NP_001026981.1	ILMN_1216399	000060139	S	3933	ATATCCTTGGTATGAATTATGTATTTAAACTATTTATAAAGAAATGAACG				17qC	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 8 (Kcnh8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	ELK1; Kv12.1; C130090D05Rik; ELK; ELK3	ELK1; Kv12.1; C130090D05Rik; ELK; ELK3
Mus musculus	RefSeq	ILMN_222838	ILMN_222838	MRPL54	NM_025317.2	NM_025317.2		66047	142385694	NM_025317.2	Mrpl54	NP_079593.1	ILMN_2755519	001070358	S	380	GGCGACTACTTCGCAAACAGAATATCTGGCGCCACAACCGGCTGAGCAAG	10	-	80727624-80727673	10qC1	Mus musculus mitochondrial ribosomal protein L54 (Mrpl54), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	0610008M19Rik; D10Sut1e	0610008M19Rik; D10Sut1e
Mus musculus	RefSeq	ILMN_210715	ILMN_210715	4921530L21RIK	NM_025733.2	NM_025733.2		66732	142375504	NM_025733.2	4921530L21Rik	NP_080009.1	ILMN_2608447	006580382	S	627	CCAGAATGAGGCTAAGGCTCTGCATGAGGAGATCAAATCCCTGTGTGAGG	14	+	96281465-96281514	14qE2.1	Mus musculus RIKEN cDNA 4921530L21 gene (4921530L21Rik), mRNA.					
Mus musculus	Riken	ILMN_203425	ILMN_203425	C030005D05RIK	ri|C030005D05|PX00073D22|AK047654|2713					AK047654	C030005D05Rik		ILMN_1233205	003310370	S	2359	CAGCCATCAGACCCCGCCAGAGGTTTCTTTGTGCAGTGGTTGGCAGCTAC										
Mus musculus	RefSeq	ILMN_219183	ILMN_219183	NIPA1	NM_153578.2	NM_153578.2		233280	118130095	NM_153578.2	Nipa1	NP_705806.1	ILMN_2705349	006770553	S	1517	ATGACGCAGAGTTCCATCGACAGGGCGACTGTCCGATAGCTCACATCAGT	7	-	63234172-63234221	7qB5	Mus musculus non imprinted in Prader-Willi/Angelman syndrome 1 homolog (human) (Nipa1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Spg6; FSP3; 1110027G09Rik; A830014A18Rik	Spg6; FSP3; 1110027G09Rik; A830014A18Rik
Mus musculus	MEEBO	ILMN_192890	ILMN_192890	AA536717	scl45858.5.1_179						AA536717		ILMN_2492284	007000709	S	4	CATGTACGTGAGGTGTCACGTGTGTTAACTACTCTTCACTCAGACAGTCT										
Mus musculus	RefSeq	ILMN_198233	ILMN_198233	LOC333778	XM_289814.2	XM_289814.2			38083061	XM_289814.2	LOC333778		ILMN_1251475	002940458	S	3293	CCCTTCTGAGGAGACCACCATTCCTACAGAAGTAACCACTGTCCCTCCTG										
Mus musculus	RefSeq	ILMN_212121	ILMN_212121	DUSP1	NM_013642.2	NM_013642.2		19252	145301574	NM_013642.2	Dusp1	NP_038670.1	ILMN_2622983	004200100	S	1741	AAATAGACCCAGAGCAGGTTTGCTTTCGGCACTGACAGACAAAGCCAGTG				17qA3.3	Mus musculus dual specificity phosphatase 1 (Dusp1), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	erp; mkp-1; Ptpn16; U19515; 3CH134	erp; mkp-1; Ptpn16; U19515; 3CH134
Mus musculus	Riken	ILMN_206938	ILMN_206938	D430050H21RIK	ri|D430050H21|PX00195J19|AK085184|1293					AK085184	D430050H21Rik		ILMN_2583822	002510097	S	842	AGATGGTAGGAGGTAGTGGCTCTATGTAGGCAGCAGCTTGACTTCTTCAT										
Mus musculus	RefSeq	ILMN_223813	ILMN_253451	GCM2	NM_008104.2	NM_008104.2		107889	113680508	NM_008104.2	Gcm2	NP_032130.2	ILMN_1224507	005890315	S	2744	GTGTATGAACACTTTAAAACTGTCACCAATTTAGACACAAGTCAACTAGC	13	-	41196881-41196930	13qA3.3	Mus musculus glial cells missing homolog 2 (Drosophila) (Gcm2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regulation of the levels, transport, and metabolism of phosphate ions within a cell or between a cell and its external environment [goid 30643] [evidence ISS]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence ISS]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	MGC130289; Gcm1; Gcm1-rs2; Gcm-rs1; MGC130290	MGC130289; Gcm1; Gcm1-rs2; Gcm-rs1; MGC130290
Mus musculus	RefSeq	ILMN_210307	ILMN_318701	A730049H05RIK	XR_035139.1	XR_035139.1		74516	149255103	XR_035139.1	A730049H05Rik		ILMN_2604298	006040577	S	2068	ATGTGTATAGATTCTAGGACAGGGATTTAAAATTAAACAAATAAATGAAC	6	+	92793288-92793337	6qD1	PREDICTED: Mus musculus RIKEN cDNA A730049H05 gene (A730049H05Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_217677	ILMN_217677	HISPPD2A	NM_178795.3	NM_178795.3		327655	34328430	NM_178795.3	Hisppd2a	NP_848910.2	ILMN_2686252	004390465	S	5437	AGATCTAGGGATGGGAGTGGGTGTGGGTAATGTTGTCATTGGAGTCTGGG	2	-	121136343-121136392	2qE5	Mus musculus histidine acid phosphatase domain containing 2A (Hisppd2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]; Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol pentakisphosphate = ADP + bis(diphospho)-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown) [goid 33857] [evidence IEA]	mKIAA0377; B430315C20Rik	mKIAA0377; B430315C20Rik
Mus musculus	MEEBO	ILMN_219344	ILMN_219344	PSMC1	scl019179.9_9				6679500	NM_008947	Psmc1		ILMN_2707503	006420072	S	1109	CACACCAGCAGGATGACACTGGCTGATGATGTAACCTTGGATGACTTGAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209486	ILMN_209486	2410001C21RIK	NM_025542.1	NM_025542.1		66404	30794467	NM_025542.1	2410001C21Rik	NP_079818.1	ILMN_2845974	006220722	S	1860	CCAAGCAGTCAGAAGACTGAGGCAGGAGGATCGCCGAGATGTCAGAGCTG	2	+	172160822-172160871	2qH3	Mus musculus RIKEN cDNA 2410001C21 gene (2410001C21Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700067C04Rik; AA589417; 5730427M17Rik	1700067C04Rik; AA589417; 5730427M17Rik
Mus musculus	RefSeq	ILMN_209486	ILMN_209486	2410001C21RIK	NM_025542.1	NM_025542.1		66404	30794467	NM_025542.1	2410001C21Rik	NP_079818.1	ILMN_2845980	004610056	S	2093	GGGACCCTGGGCGCATGACCTTTGTACTTAGAAAATTGAAATAAAGGTTG	2	+	172161055-172161104	2qH3	Mus musculus RIKEN cDNA 2410001C21 gene (2410001C21Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700067C04Rik; AA589417; 5730427M17Rik	1700067C04Rik; AA589417; 5730427M17Rik
Mus musculus	Riken	ILMN_204431	ILMN_204431	ZNFN1A3	ri|A630019G05|PX00144B17|AK041528|2207					AK041528	Znfn1a3		ILMN_1249254	000110671	S	2088	CACCTTGGATGAGATAACACAGAGATGTCGACTACCCTTGCTTGCCTGGC										
Mus musculus	RefSeq	ILMN_192181	ILMN_192181	TMEM27	NM_020626.2	NM_020626.2		57394	133892354	NM_020626.2	Tmem27	NP_065651.1	ILMN_2485729	001450768	S	507	CCCGTCTGGATTATTGTATTCGGTGTGATATTTTGCATTGTTACAGTTGC	X	+	160546360-160546409	XqF5	Mus musculus transmembrane protein 27 (Tmem27), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the release of C-terminal dipeptides from a polypeptide chain [goid 8241] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	NX17; NX=17; NX-17; collectrin; 0610008J07Rik	NX17; NX=17; NX-17; collectrin; 0610008J07Rik
Mus musculus	Riken	ILMN_203975	ILMN_203975	A530029A01RIK	ri|A530029A01|PX00140I23|AK040832|2817					AK040832	A530029A01Rik		ILMN_1228080	006290553	S	2663	GTGCTATAGAATTGAACCCAGACCCGCAGGCACACTGAGGCAGCACTGAG										
Mus musculus	RefSeq	ILMN_218282	ILMN_218282	1110007C09RIK	NM_026738.2	NM_026738.2		68480	142344140	NM_026738.2	1110007C09Rik	NP_081014.1	ILMN_2693905	003120307	S	693	TCGTGGGGCCTGTATTTCTTTTTCTAAATACTTATTTTTCATTATTTATA	13	-	49298381-49298430	13qA5	Mus musculus RIKEN cDNA 1110007C09 gene (1110007C09Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI851695	AI851695
Mus musculus	RefSeq	ILMN_221251	ILMN_221251	HIRIP3	NM_172746.2	NM_172746.2		233876	34328383	NM_172746.2	Hirip3	NP_766334.1	ILMN_1215898	005890600	S	2302	GTGGACCTTACCCTGTTATACAAGAGCCTGGTCAGTGGAAGCAACTTCCA	7	+	134008427-134008476	7qF3	Mus musculus HIRA interacting protein 3 (Hirip3), mRNA.				C86302; B130036O03	C86302; B130036O03
Mus musculus	RefSeq	ILMN_221775	ILMN_221775	NEPN	NM_025684.2	NM_025684.2		66650	142359018	NM_025684.2	Nepn	NP_079960.1	ILMN_1247855	004670291	S	1609	ATGTCCACTGTCTTAAGCACAAGTGTGCTATCATTTAAACATTGCAAGCC	10	+	52124196-52124245	10qB3	Mus musculus nephrocan (Nepn), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that decreases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10553] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Npn; 5730521E12Rik	Npn; 5730521E12Rik
Mus musculus	Riken	ILMN_205042	ILMN_205042	A830007F11RIK	ri|A830007F11|PX00153B22|AK043547|2461					AK043547	A830007F11Rik		ILMN_1216242	006760634	S	2122	CAGCTCTCTTATAACTTCTTACAGGGCGTAGAAGTCCTGGGGCCAGACAG										
Mus musculus	RefSeq	ILMN_187911	ILMN_243165	NFATC2IP	NM_010900.2	NM_010900.2		18020	141802978	NM_010900.2	Nfatc2ip	NP_035030.1	ILMN_1235902	000540437	S	3042	GCTGGGCTCCTGACTATTGTGTGTTACTTATAAACTGTCTAAAATGCACC	7	-	133526664-133526713	7qF3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein (Nfatc2ip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	NIP45; MGC130564; D7Ertd304e	NIP45; MGC130564; D7Ertd304e
Mus musculus	RefSeq	ILMN_221710	ILMN_321979	UBE2DNL	NR_003645.1	NR_003645.1		237009	153792101	NR_003645.1	Ube2dnl		ILMN_2739355	001400373	S	109	CTGCATAACAGCCTTCCAGCAACCTCAGCAGATTTTTAGCTCTTGGCCTA				XqE1	Mus musculus ubiquitin-conjugating enzyme E2D N-terminal like (Ube2dnl), non-coding RNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MGC58426	MGC58426
Mus musculus	RefSeq	ILMN_195875	ILMN_195875	UOX	NM_009474.3	NM_009474.3		22262	31981672	NM_009474.3	Uox	NP_033500.1	ILMN_2822643	005860020	S	1643	GAGAAAGAACATGAAGTTGGGTGAGTGAGAAAGACTTGGGATAAACTGGG	3	+	146568669-146568718	3qH2	Mus musculus urate oxidase (Uox), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine [goid 6144] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: urate + O2 + H2O = 5-hydroxyisourate + H2O2 [goid 4846] [evidence TAS]	AI663847	AI663847
Mus musculus	RefSeq	ILMN_195875	ILMN_195875	UOX	NM_009474.3	NM_009474.3		22262	31981672	NM_009474.3	Uox	NP_033500.1	ILMN_2519536	005550273	S	17	TTGTAGTGGTATGTATGTGGAGTCCCATGTTAGCAGGCCCAACCTGCTCC	3	+	146534551-146534589:146534590-146534600	3qH2	Mus musculus urate oxidase (Uox), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine [goid 6144] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: urate + O2 + H2O = 5-hydroxyisourate + H2O2 [goid 4846] [evidence TAS]	AI663847	AI663847
Mus musculus	RefSeq	ILMN_209173	ILMN_209173	PRX	NM_019412.1	NM_019412.1		19153	9506998	NM_019412.1	Prx	NP_062285.1	ILMN_2766187	004480370	S	741	CCTTTCACTGTGGCCCACTTTGGCCCTCTGTCTGTCACTAACCCGACACT	7	+	28300541-28300590	7qA3	Mus musculus periaxin (Prx), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	L-Periaxin	L-Periaxin
Mus musculus	RefSeq	ILMN_210124	ILMN_210124	RABEPK	NM_145522.3	NM_145522.3		227746	142368010	NM_145522.3	Rabepk	NP_663497.2	ILMN_2602486	005810022	S	1500	GTAGATACCCAAGCTAGGTATTGGAGTAGACAATTACGAGTTAGACACTC	2	-	34634373-34634422	2qB	Mus musculus Rab9 effector protein with kelch motifs (Rabepk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			8430412M01Rik; C87311; 9530020D24Rik; Rab9p40; RP23-446N16.2; AV073337	8430412M01Rik; C87311; 9530020D24Rik; Rab9p40; RP23-446N16.2; AV073337
Mus musculus	RefSeq	ILMN_217452	ILMN_229297	ORF61	NM_001003949.3	NM_001003949.3		216157	114051543	NM_001003949.3	ORF61	NP_001003949.2	ILMN_2683363	002810274	S	1758	TAGGTTGGGTGGCCGAGACCGCCGCCATCATCTCTGACGCATCCTTCCTG	10	-	79440280-79440329	10qC1	Mus musculus open reading frame 61 (ORF61), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AC087114.7gm12; FLJ00277; R32184_3; mFLJ00277; AC087114.7gm2; MGC90890	AC087114.7gm12; FLJ00277; R32184_3; mFLJ00277; AC087114.7gm2; MGC90890
Mus musculus	MEEBO	ILMN_187314	ILMN_187314	CYP2U1	scl0071519.1_220				51708420	XM_131188	Cyp2u1		ILMN_1256332	000630372	S	7	GCAGAACTTGGGGGCCAGGAAAGAACCTCCTGTATTGAGGGATTAGTGAG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187314	ILMN_187314	CYP2U1	scl0071519.1_220				51708420	XM_131188	Cyp2u1		ILMN_2477408	000830386	S	18	AAGAGAAACTTTTATTCCTTTTGGGATAGGTCAGTTAAAGCTTGGTTTTA						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200457	ILMN_200457	LOC383226	XM_356931.1	XM_356931.1			38082200	XM_356931.1	LOC383226		ILMN_2538827	003290470	S	148	GGTCGTGCCCAGGAAAACAAGTGTGGACTCACCTATGACTGCCCCCACAG										
Mus musculus	RefSeq	ILMN_217362	ILMN_313276	LOC100047368	XM_001477998.1	XM_001477998.1		100047368	149254367	XM_001477998.1	LOC100047368	XP_001478048.1	ILMN_2682333	002600324	S	1816	TCAGAGAAGGGGGACGAGATAAGGCTCAAGAAGAAGGTGATAGGCTGAGC					PREDICTED: Mus musculus similar to coiled-coil domain containing 63 (LOC100047368), mRNA.					
Mus musculus	RefSeq	ILMN_222815	ILMN_222815	MTMR12	NM_172958.3	NM_172958.3		268783	118129923	NM_172958.3	Mtmr12	NP_766546.1	ILMN_2755215	003990692	S	4141	GCCAGATTTCTATAACTTGGATTTGTGTACAGAACTTCCCGTGGGTTTAT	15	+	12201618-12201667	15qA1	Mus musculus myotubularin related protein 12 (Mtmr12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	C730015A02Rik; 3Pap; 4932703C11; mKIAA1682; Pip3ap	C730015A02Rik; 3Pap; 4932703C11; mKIAA1682; Pip3ap
Mus musculus	RefSeq	ILMN_221700	ILMN_221700	REM2	NM_080726.3	NM_080726.3		140743	142362987	NM_080726.3	Rem2	NP_542764.1	ILMN_1222084	006330026	S	1722	GGCACGTTTCCTTTAAGGTTATTGATGTGACGATGTGGGCAGACTCTCTG	14	+	55099106-55099155	14qC3	Mus musculus rad and gem related GTP binding protein 2 (Rem2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AW411893	AW411893
Mus musculus	Riken	ILMN_205363	ILMN_205363	GRASP	ri|D130015G08|PX00182D20|AK051199|1497					AK051199	Grasp		ILMN_1237719	006510687	S	1371	CCTCAGGCAGTTTGGCACTTGGGGAAAGGGTTGGTCCCAGATGAGACTTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence ISO]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IPI]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_239000	ILMN_239000	CNFN	NM_001081375.1	NM_001081375.1		72383	124487008	NM_001081375.1	Cnfn	NP_001074844.1	ILMN_3043109	000130484	I	9	TGTCTGCTGTCACCAAGAACCTCTATCTCCATCCCCTCACGTGGATCTGC	7	-	26154685-26154734	7qA3	Mus musculus cornifelin (Cnfn), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence ISA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2210418J09Rik	2210418J09Rik
Mus musculus	RefSeq	ILMN_214065	ILMN_239000	CNFN	NM_001081375.1	NM_001081375.1		72383	124487008	NM_001081375.1	Cnfn	NP_001074844.1	ILMN_1219178	002230148	S	258	GGAGGTCTGCACTCTCTGCGCACCGGCATGAGGGAGCGCTACCACATCCA	7	-	26152985-26153034	7qA3	Mus musculus cornifelin (Cnfn), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence ISA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2210418J09Rik	2210418J09Rik
Mus musculus	MEEBO	ILMN_217148	ILMN_217148	ART1	scl0011870.1_144	NM_009710.2			21687249	NM_009710.2	Art1		ILMN_2679609	003290121	S	2087	TAGTCGGGATTTAGTGGTCAGGGCAGCACAGTGGCGTGAACCTCATTAGT						Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221524	ILMN_226749	LRRC69	NM_028499.2	NM_028499.2		73314	142350860	NM_028499.2	Lrrc69	NP_082775.1	ILMN_1224613	001050431	S	844	CAAGGACAAACTCTCCAAAGCAAAAAAGTGTTCAATATGCAGGAAACCTT	4	-	14631079-14631128	4qA1	Mus musculus leucine rich repeat containing 69 (Lrrc69), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212999	ILMN_239681	DSEL	NM_001081316.1	NM_001081316.1		319901	124486780	NM_001081316.1	Dsel	NP_001074785.1	ILMN_1222968	004120139	S	5114	AATGCTATTTGCCACTTCCACAAACCTTTTTTATCTTCCATATGAGGGGG	1	-	113755878-113755927	1qE2.2	Mus musculus dermatan sulfate epimerase-like (Dsel), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9330132E09Rik	9330132E09Rik
Mus musculus	RefSeq	ILMN_239681	ILMN_239681	DSEL	NM_001081316.1	NM_001081316.1		319901	124486780	NM_001081316.1	Dsel	NP_001074785.1	ILMN_2956387	003800279	S	512	AGGCGGCCTGAGGTAAGCCGACTTGGCCATTTAGAGGTCTCTCTAGTCCC	1	-	113760934-113760983	1qE2.2	Mus musculus dermatan sulfate epimerase-like (Dsel), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9330132E09Rik	9330132E09Rik
Mus musculus	RefSeq	ILMN_220054	ILMN_220054	EG208426	NM_177585.3	NM_177585.3		208426	141802156	NM_177585.3	EG208426	NP_808253.1	ILMN_2717025	006760471	S	1470	ACCCAACATTTGGTCATTTGGAGAAAGGGATCCCTGTTACTGGCCTCCCG	3	+	67860406-67860455	3qE1	Mus musculus predicted gene, EG208426 (EG208426), mRNA.				MGC130260; MGC130259; D230050A05	MGC130260; MGC130259; D230050A05
Mus musculus	Riken	ILMN_203866	ILMN_203866	A630006E02RIK	ri|A630006E02|PX00144K17|AK041380|552					AK041380	A630006E02Rik		ILMN_2560567	007330131	S	348	ATGTGGCCCGCTTTGCTGAGGGCTTGGAGAAGCTCAAGGAGTGTGTGCTG										
Mus musculus	Riken	ILMN_206159	ILMN_206159	IL16	ri|C920009A07|PX00178J19|AK083338|2605					AK083338	Il16		ILMN_1220972	000360164	S	2470	ACCTGCAAGTCAGGGACTCTGGTAGCTCACAGCCAATGAACTGCTTTGCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IDA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217235	ILMN_217235	ATAD2	NM_027435.2	NM_027435.2		70472	91199556	NM_027435.2	Atad2	NP_081711.2	ILMN_2680648	004200692	S	3365	GTAGCTCCTCCAAATACGCACCATCTTATTACCACGTCATGCCAAAGCAA	15	-	57931356-57931405	15qD1	Mus musculus ATPase family, AAA domain containing 2 (Atad2), mRNA. XM_977863 XM_986850 XM_986886 XM_986920 XM_986957 XM_986994 XM_987027 XM_987064 XM_987087			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MGC38189; 2610509G12Rik	MGC38189; 2610509G12Rik
Mus musculus	RefSeq	ILMN_221067	ILMN_217235	ATAD2	NM_027435.2	NM_027435.2		70472	91199556	NM_027435.2	Atad2	NP_081711.2	ILMN_1239422	000870364	S	5615	ATTATAACTTATTTCAGATGTGTCCTTTTATTGTACATTTTGTATAATAA	15	-	57925620-57925669	15qD1	Mus musculus ATPase family, AAA domain containing 2 (Atad2), mRNA. XM_977863 XM_986850 XM_986886 XM_986920 XM_986957 XM_986994 XM_987027 XM_987064 XM_987087			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MGC38189; 2610509G12Rik	MGC38189; 2610509G12Rik
Mus musculus	RefSeq	ILMN_260467	ILMN_260467	GM833	NM_001033414.1	NM_001033414.1		330004	85701914	NM_001033414.1	Gm833	NP_001028586.1	ILMN_2797127	006370358	S	438	GAGGTGTCCCTGTCACCAAGTCTTTCTCCAAGCTGAGTTGGCGGCTGGAT	4	+	151542869-151542902:151542903-151542918	4qE2	Mus musculus gene model 833, (NCBI) (Gm833), mRNA.					
Mus musculus	RefSeq	ILMN_219084	ILMN_219084	SLC4A4	NM_018760.2	NM_018760.2		54403	133922579	NM_018760.2	Slc4a4	NP_061230.2	ILMN_2776957	004010736	S	246	CTCCGAGAACTACTCCGACAAATCTGATGTGGAGAATGCGGATGAGTCCA	5	+	89383909-89383958	5qE1	Mus musculus solute carrier family 4 (anion exchanger), member 4 (Slc4a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence TAS]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence ISS]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]	Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA];  [goid 5452] [evidence IEA];  [goid 15380] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + HCO3-(out) = Na+(in) + HCO3-(in) [goid 8510] [evidence ISS]	NBC; NBC1; AI835705	NBC; NBC1; AI835705
Mus musculus	MEEBO	ILMN_192312	ILMN_192312	SCL000205.1_10	scl000205.1_10	AK013903.1			12851454	AK013903.1	scl000205.1_10		ILMN_2486945	004480500	S	20	CTTGAGGGTTCAGAATCGTGCCCTGCAAACAGCTTATGGGGGACTGGGGA										
Mus musculus	MEEBO	ILMN_208661	ILMN_208661	4933406G16RIK	scl41814.3.1_12				51766310	XM_488588	4933406G16Rik		ILMN_2588319	006760689	S	983	CAGGCTTGTGAGGGATGCTCAGCACGCAGAACTCTCAGCACGCAGAACTC										
Mus musculus	RefSeq	ILMN_210896	ILMN_323601	LOC100047009	XR_033125.1	XR_033125.1		100047009	149253578	XR_033125.1	LOC100047009		ILMN_2628591	004010095	S	1510	GACCGGCTTCATTAACTACTATGGCATGCAAAGGTTCGGGACCACAGCTG					PREDICTED: Mus musculus hypothetical protein LOC100047009 (LOC100047009), misc RNA.					
Mus musculus	RefSeq	ILMN_210896	ILMN_323601	LOC100047009	XR_033125.1	XR_033125.1		100047009	149253578	XR_033125.1	LOC100047009		ILMN_1246359	002260647	S	205	TGGTGGGATAACCCGTCCCTGTGCGTCTCCACGCGGTGCAGCCTGTGCTG					PREDICTED: Mus musculus hypothetical protein LOC100047009 (LOC100047009), misc RNA.					
Mus musculus	RefSeq	ILMN_210896	ILMN_323601	LOC100047009	XR_033125.1	XR_033125.1		100047009	149253578	XR_033125.1	LOC100047009		ILMN_2610309	006900561	S	2754	TTACACATGGTCCGTGTCAGAGCAAATGCAGCAGACTGGAAACTAGAGAC					PREDICTED: Mus musculus hypothetical protein LOC100047009 (LOC100047009), misc RNA.					
Mus musculus	RefSeq	ILMN_243605	ILMN_243605	GM1821	NR_002875.1	NR_002875.1		624036	84872169	NR_002875.1	Gm1821		ILMN_3157823	000110092	A	312	TCCGTCTGAGGGGTGGCATGCAGATCTTCGTGAAGACCCTGACCGGCAAG					Mus musculus gene model 1821, (NCBI) (Gm1821), non-coding RNA. XM_899826					
Mus musculus	Riken	ILMN_205659	ILMN_205659	A830007A13RIK	ri|A830007A13|PX00153N14|AK043539|2982					AK043539	A830007A13Rik		ILMN_1229344	001500576	S	2636	CCTGTGCTGGGCTGTGGCTAATGGCAGGAGGGGACCAAGAAATTCGGTTG										
Mus musculus	RefSeq	ILMN_222952	ILMN_222952	PIWIL4	NM_177905.3	NM_177905.3		330890	52138555	NM_177905.3	Piwil4	NP_808573.2	ILMN_3000090	004780059	S	2451	CAATGCCTTGAAGCCTGACCACATGCAGCGACTGACCTTCAAACTGTGCC	9	-	14507488-14507537	9qA2	Mus musculus piwi-like homolog 4 (Drosophila) (Piwil4), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Miwi2; 9230101H05Rik	Miwi2; 9230101H05Rik
Mus musculus	RefSeq	ILMN_191896	ILMN_242356	ZFP612	NM_175480.3	NM_175480.3		234725	31559870	NM_175480.3	Zfp612	NP_780689.2	ILMN_2491719	000510523	S	1980	TGCGAGAAAGCGTTCAGCTGTAGCTCTGACTATATTGTGCACCAGAGGAT	8	+	112613758-112613807	8qD3	Mus musculus zinc finger protein 612 (Zfp612), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	B230354B21Rik	B230354B21Rik
Mus musculus	RefSeq	ILMN_214289	ILMN_214289	SYT13	NM_030725.4	NM_030725.4		80976	146149151	NM_030725.4	Syt13	NP_109650.1	ILMN_1229379	003440367	S	3543	GACGACCACAGTTGAATTTTCTTCTTGTGCCCTATACTGAGAAGACCAGG				2qE1	Mus musculus synaptotagmin XIII (Syt13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IPI]		AI549909; mKIAA1427; 5730409J20Rik	AI549909; mKIAA1427; 5730409J20Rik
Mus musculus	RefSeq	ILMN_218200	ILMN_218200	PPIL4	NM_026141.2	NM_026141.2		67418	27532957	NM_026141.2	Ppil4	NP_080417.1	ILMN_2692868	003840619	S	2808	TGGGAGTGTAATATGTTTGCTATATGTTAATATTCTGGAACAAGTAAATC	10	+	7542300-7542349	10qA1	Mus musculus peptidylprolyl isomerase (cyclophilin)-like 4 (Ppil4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AW146233; AI788954; 3830425H19Rik; PPIase; 3732410E19Rik	AW146233; AI788954; 3830425H19Rik; PPIase; 3732410E19Rik
Mus musculus	MEEBO	ILMN_190939	ILMN_190939	SCL0002275.1_1	scl0002275.1_1	BC019166.1			17512408	BC019166.1	scl0002275.1_1		ILMN_1246301	005870689	S	5	GCTTCTAGCCAGGTGTGGTGGCCCAGTTCTGTAATGCCAGTCCTTGGGAG										
Mus musculus	MEEBO	ILMN_222819	ILMN_222819	6530439I21	scl16240.4.1_0	NM_177837.2			31342883	NM_177837.2	6530439I21		ILMN_1240681	005720259	S	1654	TACACAGGTAACCATGGCCTGCCTCCCTGGGGGCTGGGCCCCTGAAAGGG										
Mus musculus	RefSeq	ILMN_211906	ILMN_211906	TMEM60	NM_177601.3	NM_177601.3		212090	113930706	NM_177601.3	Tmem60	NP_808269.1	ILMN_2813390	006060576	S	404	GTCATGCTGATTGTGAAAATGGCCGGACGGTGTAAGTCTGGCTTTGACCC	5	+	20392207-20392256	5qA3	Mus musculus transmembrane protein 60 (Tmem60), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC38035; BC027828	MGC38035; BC027828
Mus musculus	RefSeq	ILMN_210909	ILMN_210909	WSCD1	NM_177618.4	NM_177618.4		216881	42475951	NM_177618.4	Wscd1	NP_808286.2	ILMN_2610442	006250082	S	2316	CTCCTTGCCGGACACTTACGCATCCTCAGACACACTTAGACATCACCCCA	11	+	71602726-71602775	11qB4	Mus musculus WSC domain containing 1 (Wscd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			mKIAA0523; MGC55022; KIAA0523; RP23-223C15.3	mKIAA0523; MGC55022; KIAA0523; RP23-223C15.3
Mus musculus	Riken	ILMN_206352	ILMN_206352	D430003P20RIK	ri|D430003P20|PX00193F07|AK084864|2230					AK084864	D430003P20Rik		ILMN_1232824	002070017	S	2140	GTAGCCCAGGTTACCCCTCAAACCAAAGGCAATCCCCATGCACTGGTCAC										
Mus musculus	RefSeq	ILMN_201902	ILMN_226630	MAPKBP1	NM_011941.2	NM_011941.2		26390	71037374	NM_011941.2	Mapkbp1	NP_036071.2	ILMN_1226033	000990209	S	4691	CAGGAGACGGGTGATGTGACTTTGCTCTGCCGAAGGTGTCTTATAGCTGG	2	+	119850893-119850942	2qE5	Mus musculus mitogen-activated protein kinase binding protein 1 (Mapkbp1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC [goid 9401] [evidence IEA]; The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity in response to phosphorylation by a member of the JUN kinase kinase kinase (JNKKK) family, or another upstream kinase. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress [goid 7256] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Jnkbp1; 2810483F24Rik; mKIAA0596; AW123212	Jnkbp1; 2810483F24Rik; mKIAA0596; AW123212
Mus musculus	RefSeq	ILMN_226630	ILMN_226630	MAPKBP1	NM_011941.2	NM_011941.2		26390	71037374	NM_011941.2	Mapkbp1	NP_036071.2	ILMN_2873793	004490706	S	6694	CCTGCATGGGTGGGGTCTTGTGGCCTGTGGCACTTTGTCCTCTTCTGCAT	2	+	119852896-119852945	2qE5	Mus musculus mitogen-activated protein kinase binding protein 1 (Mapkbp1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC [goid 9401] [evidence IEA]; The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity in response to phosphorylation by a member of the JUN kinase kinase kinase (JNKKK) family, or another upstream kinase. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress [goid 7256] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Jnkbp1; 2810483F24Rik; mKIAA0596; AW123212	Jnkbp1; 2810483F24Rik; mKIAA0596; AW123212
Mus musculus	RefSeq	ILMN_209330	ILMN_209330	LARP6	NM_026235.4	NM_026235.4		67557	146134911	NM_026235.4	Larp6	NP_080511.2	ILMN_1219564	007570692	S	1914	CGCGCAAGGGCTCCTCTTAAGACCTCAAAGGAGATGTGCTTTATGGTAAA				9qB	Mus musculus La ribonucleoprotein domain family, member 6 (Larp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	5430431G03Rik; MGC115805; AI552438	5430431G03Rik; MGC115805; AI552438
Mus musculus	RefSeq	ILMN_209330	ILMN_209330	LARP6	NM_026235.4	NM_026235.4		67557	146134911	NM_026235.4	Larp6	NP_080511.2	ILMN_2594779	002760452	S	1962	AATCCTACAGTCAATAGCATGGTGTCTCATAGGACTGAGTGTGTCTGTTC				9qB	Mus musculus La ribonucleoprotein domain family, member 6 (Larp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	5430431G03Rik; MGC115805; AI552438	5430431G03Rik; MGC115805; AI552438
Mus musculus	RefSeq	ILMN_222464	ILMN_229356	SLC22A15	XM_001002464.2	XM_001002464.2		242126	149251342	XM_001002464.2	Slc22a15	XP_001002464.2	ILMN_1253010	000520424	S	544	GAGGAGGCGTTCCAGGCGGTGGGCGAGATGGGCCTCTATCAGATGTACTT	3	-	101727982-101728031	3qF2.2	PREDICTED: Mus musculus solute carrier family 22 (organic anion/cation transporter), member 15 (Slc22a15), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220959	ILMN_220959	CDH4	NM_009867.1	NM_009867.1		12561	6753375	NM_009867.1	Cdh4	NP_033997.1	ILMN_1255939	000160132	S	2498	GGGTGGATGAACGGCCAGTAGGTGCTGAACCCCAGTACCCAGTCAGGCCT	2	+	179628805-179628854	2qH4	Mus musculus cadherin 4 (Cdh4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of axon extension [goid 45773] [evidence IDA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	R-cadherin; AW120700; Rcad	R-cadherin; AW120700; Rcad
Mus musculus	RefSeq	ILMN_220680	ILMN_220680	CCNC	NM_016746.2	NM_016746.2		51813	141802414	NM_016746.2	Ccnc	NP_058026.1	ILMN_2725232	006040475	S	2602	GTGTATGCTCTAGCCTCAGCCATTACTGATTCATAGCCAGTTTCACCTTA	4	+	21676934-21676983	4qA3	Mus musculus cyclin C (Ccnc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		CG1C; AU020987; AI451004	CG1C; AU020987; AI451004
Mus musculus	RefSeq	ILMN_218409	ILMN_218409	HRASLS5	NM_025731.1	NM_025731.1		66727	21313353	NM_025731.1	Hrasls5	NP_080007.1	ILMN_2999683	002650609	S	927	GAAGGTGCTACAATTCTGTGCGGAGGAAGAGCTACTAGCAGCTGCGGAGC	19	+	7706166-7706166:7706167-7706215	19qA	Mus musculus HRAS-like suppressor family, member 5 (Hrasls5), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	1700086E08Rik; 4921526K24Rik; 1700055A14Rik	1700086E08Rik; 4921526K24Rik; 1700055A14Rik
Mus musculus	Riken	ILMN_202456	ILMN_202456	MOR	ri|4930580F03|PX00036J19|AK016338|1501					AK016338	MOR		ILMN_2549755	000780176	S	753	CTAGACCCACAGCTCCAGTCTCCAATGTATTACTTTCTGAAGCACTTTCC										
Mus musculus	MEEBO	ILMN_215294	ILMN_215294	STXBP2	scl34132.19.1_1	NM_011503.2			31981471	NM_011503.2	Stxbp2		ILMN_2657728	001070152	S	1731	ACTCCAACCCGCTTCCTCGATGACCTCAAGACACTGGATCAGAAGCTGGA							The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence TAS]		
Mus musculus	RefSeq	ILMN_201238	ILMN_201238	LOC382099	XM_356179.1	XM_356179.1			38090056	XM_356179.1	LOC382099		ILMN_1247424	004180136	S	453	TGTTATGCACCACATGCCAGGACAGCCTCCCTACATACCTGGGCAGATGC										
Mus musculus	MEEBO	ILMN_192143	ILMN_192143	9626962_3	9626962_3						9626962_3		ILMN_2485408	005290128	S	12	GTCTCCTCTGAGTGATTGACTACCCACGACGGGGGTCTTTCATTTGGGGG										
Mus musculus	RefSeq	ILMN_216955	ILMN_216955	VSX2	NM_007701.2	NM_007701.2		12677	31982857	NM_007701.2	Vsx2	NP_031727.1	ILMN_2677397	000940594	S	2618	CTCCGTGCCAGCTGTATGCCCAGAAAGGTGTCCATAGATAAGGAGCCATG	12	+	85935845-85935894	12qD1	Mus musculus visual system homeobox 2 (Vsx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form [goid 60042] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina [goid 60040] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	or; Hox-10; Hox10	or; Hox-10; Hox10
Mus musculus	RefSeq	ILMN_216955	ILMN_216955	VSX2	NM_007701.2	NM_007701.2		12677	31982857	NM_007701.2	Vsx2	NP_031727.1	ILMN_2917713	001110064	S	2775	CCTGGCTTTATACATGTACTAGGGGTGCAGAGCCTTCTGGGGTCCTCTGC	12	+	85936002-85936051	12qD1	Mus musculus visual system homeobox 2 (Vsx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process by which the anatomical structure of the retina is generated and organized. Morphogenesis pertains to the creation of form [goid 60042] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina [goid 60040] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	or; Hox-10; Hox10	or; Hox-10; Hox10
Mus musculus	MEEBO	ILMN_223672	ILMN_223672	GPR75	scl41737.1.1_327	NM_175490.2			31342013	NM_175490.2	Gpr75		ILMN_1242693	003370215	S	2313	TGAAGTACTGAAACAGCAAACAGTGTACTTTTTTTGGTGGCAAGTGATTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209029	ILMN_209029	UGT2B35	NM_172881.3	NM_172881.3		243085	147900001	NM_172881.3	Ugt2b35	NP_766469.1	ILMN_1236727	002120537	S	2586	TCCTCCATATTTGTGTGGTAGAAGGAGAGAACCAATTCTCCCAAGTTGTC				5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide B35 (Ugt2b35), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	C730031G17	C730031G17
Mus musculus	RefSeq	ILMN_217977	ILMN_217977	RUNDC1	NM_172566.2	NM_172566.2		217201	142364318	NM_172566.2	Rundc1	NP_766154.1	ILMN_1257394	006250681	S	2529	CAAGCTGGGAACAGTCTTCCTTTACCAGAAGCAGCTTTGAGAGCCCTAGG	11	+	101296293-101296342	11qD	Mus musculus RUN domain containing 1 (Rundc1), mRNA.				MGC141375; MGC141376; D930024B17; RP23-328K2.1; AW125546	MGC141375; MGC141376; D930024B17; RP23-328K2.1; AW125546
Mus musculus	RefSeq	ILMN_186316	ILMN_227023	CCNI	NM_017367.2	NM_017367.2		12453	31560455	NM_017367.2	Ccni	NP_059063.1	ILMN_1225364	001660609	S	2176	CATATTATGCCATTAGGATTTTCTTGATAAGGAATTATTCCCTTGTTTCT	5	-	93611070-93611119	5qE2	Mus musculus cyclin I (Ccni), mRNA.		Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence TAS]	Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence ISS]		
Mus musculus	RefSeq	ILMN_195255	ILMN_215762	PRDM16	NM_027504.3	NM_027504.3		70673	124107622	NM_027504.3	Prdm16	NP_081780.3	ILMN_2513922	001070239	S	6163	CTAGGTGGGAGCTAGTCCTGTGTAAGTTCAACCTCAGATATACATGCCCC	4	-	153692626-153692675	4qE2	Mus musculus PR domain containing 16 (Prdm16), mRNA.			Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]	mel1; 5730557K01Rik; mKIAA1675; KIAA1675; C130091E20	mel1; 5730557K01Rik; mKIAA1675; KIAA1675; C130091E20
Mus musculus	RefSeq	ILMN_215762	ILMN_215762	PRDM16	NM_027504.3	NM_027504.3		70673	124107622	NM_027504.3	Prdm16	NP_081780.3	ILMN_2663314	000770630	S	4341	GAGAATCACATGATTAAGCCTTTTGGTAATCTTATTGACTATAGAGTCTA	4	-	153694448-153694497	4qE2	Mus musculus PR domain containing 16 (Prdm16), mRNA.			Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IPI]	mel1; 5730557K01Rik; mKIAA1675; KIAA1675; C130091E20	mel1; 5730557K01Rik; mKIAA1675; KIAA1675; C130091E20
Mus musculus	RefSeq	ILMN_199873	ILMN_199873	LOC384022	XM_357375.1	XM_357375.1			38078469	XM_357375.1	LOC384022		ILMN_1249246	002630026	S	325	GCTGGAGAGTCCTATCCTTTCTCTTGGGGAAATAAAGTGGACCTGGTACC										
Mus musculus	RefSeq	ILMN_208940	ILMN_208940	ACSL4	NM_207625.2	NM_207625.2		50790	75992923	NM_207625.2	Acsl4	NP_997508.1	ILMN_2696375	006660722	S	466	CCTTAAGCTAAATGTGCTCACCATTATATTGCTGCCTGTCCACTTGTTAA	X	-	138786217-138786266	XqF2	Mus musculus acyl-CoA synthetase long-chain family member 4 (Acsl4), transcript variant 1, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence ISA]	AU018108; Facl4; ACS4; 9430020A05Rik; Lacs4	AU018108; Facl4; ACS4; 9430020A05Rik; Lacs4
Mus musculus	RefSeq	ILMN_221334	ILMN_221334	OLFR480	NM_020291.1	NM_020291.1		56861	9938015	NM_020291.1	Olfr480	NP_064687.1	ILMN_2734135	007320047	S	979	GTTAAAGAAGCCATGAAAAAACTGATTGCTAAAACACATTGGTGGTCCTG	7	-	115209282-115209331	7qE3	Mus musculus olfactory receptor 480 (Olfr480), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	S25; MOR204-32; Ors25	S25; MOR204-32; Ors25
Mus musculus	RefSeq	ILMN_197033	ILMN_251577	LOC674997	XR_005107.2	XR_005107.2		674997	149263591	XR_005107.2	LOC674997		ILMN_1227901	000450349	S	1341	CTCCGAGAACCAAGAGTTACCTCACTACAGACGCCTCACCCAGCAGTTCT					PREDICTED: Mus musculus similar to Cdk5 and Abl enzyme substrate 2 (LOC674997), misc RNA.					
Mus musculus	RefSeq	ILMN_197025	ILMN_197025	LOC226523	XM_136339.2	XM_136339.2			38073559	XM_136339.2	LOC226523		ILMN_1255692	001500494	S	1088	GGACCACAGACAGCAAGGGAGGACTGCAACTAACCAAACTGGAGGACTTG										
Mus musculus	RefSeq	ILMN_209271	ILMN_209271	1700003M02RIK	NM_027041.2	NM_027041.2		69329	66793399	NM_027041.2	1700003M02Rik	NP_081317.2	ILMN_3162009	003370280	S	1373	CGTGGATTTTGTGGCTACACATTTGCTGTGACTGATGGCCTTCTCCTCCC	4	-	34661645-34661694	4qA5	Mus musculus RIKEN cDNA 1700003M02 gene (1700003M02Rik), mRNA.				AU024269	AU024269
Mus musculus	RefSeq	ILMN_216564	ILMN_216564	NUDT15	NM_172527.2	NM_172527.2		214254	142371342	NM_172527.2	Nudt15	NP_766115.1	ILMN_2738790	005560240	S	2537	TTAACATGTACCTGGTTTTTACTATATGGTCAATAAACTTCCCTAACTTT	14	-	73919676-73919725	14qD3	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 15 (Nudt15), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleoside triphosphate, a glycosamine consisting of a purine base linked to a deoxyribose sugar esterified with triphosphate on its glycose moiety [goid 9217] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 8-oxo-7,8-dihydroguanine triphosphate = 8-oxo-7,8-dihydroguanine phosphate + diphosphate [goid 8413] [evidence IDA]	MTH2; A730068G11Rik; 6530403O17	MTH2; A730068G11Rik; 6530403O17
Mus musculus	RefSeq	ILMN_216564	ILMN_216564	NUDT15	NM_172527.2	NM_172527.2		214254	142371342	NM_172527.2	Nudt15	NP_766115.1	ILMN_2737794	000650113	S	339	TTCGTGAGACACAACACTCAGCGAGCAATCAGCGAGGCTCCTGCCGGTTC	14	-	73925062-73925111	14qD3	Mus musculus nudix (nucleoside diphosphate linked moiety X)-type motif 15 (Nudt15), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of purine deoxyribonucleoside triphosphate, a glycosamine consisting of a purine base linked to a deoxyribose sugar esterified with triphosphate on its glycose moiety [goid 9217] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 8-oxo-7,8-dihydroguanine triphosphate = 8-oxo-7,8-dihydroguanine phosphate + diphosphate [goid 8413] [evidence IDA]	MTH2; A730068G11Rik; 6530403O17	MTH2; A730068G11Rik; 6530403O17
Mus musculus	RefSeq	ILMN_220305	ILMN_220305	RAB39B	NM_175122.4	NM_175122.4		67790	146198685	NM_175122.4	Rab39b	NP_780331.1	ILMN_1239735	002350746	S	2866	GACTCTTGTTGACTCAAGGGGGCAGGGGTAGAAATAAAACAGGTCTACAG				XqA7.3	Mus musculus RAB39B, member RAS oncogene family (Rab39b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	6330580M05Rik	6330580M05Rik
Mus musculus	RefSeq	ILMN_196591	ILMN_196591	DEFCR-RS7	NM_007848.1	NM_007848.1		13226	6681170	NM_007848.1	Defcr-rs7	NP_031874.1	ILMN_2524945	001980142	S	201	ACGGTGCCCACCATGCCCGAGATGCAGTTGGTGCCCAAGGTGCCCGACGT				8qA2	Mus musculus defensin related cryptdin, related sequence 7 (Defcr-rs7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	CRS4C3a; CRS4C3d; CRS4C2d; CRS4C2c; CRS4C2b; CRS4C3c; CRS4C3a2; CRS4C3b; CRS4C3e; CRS4C-2	CRS4C3a; CRS4C3d; CRS4C2d; CRS4C2c; CRS4C2b; CRS4C3c; CRS4C3a2; CRS4C3b; CRS4C3e; CRS4C-2
Mus musculus	RefSeq	ILMN_196591	ILMN_196591	DEFCR-RS7	NM_007848.1	NM_007848.1		13226	6681170	NM_007848.1	Defcr-rs7	NP_031874.1	ILMN_2607813	002140561	S	156	TGGTCTTCAAGATGCAGCAGCCCTAGGATGGGGTCGGCGGTGCCCACGGT	8	+	22331448-22331463	8qA2	Mus musculus defensin related cryptdin, related sequence 7 (Defcr-rs7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	CRS4C3a; CRS4C3d; CRS4C2d; CRS4C2c; CRS4C2b; CRS4C3c; CRS4C3a2; CRS4C3b; CRS4C3e; CRS4C-2	CRS4C3a; CRS4C3d; CRS4C2d; CRS4C2c; CRS4C2b; CRS4C3c; CRS4C3a2; CRS4C3b; CRS4C3e; CRS4C-2
Mus musculus	MEEBO	ILMN_212056	ILMN_212056	EPHB2	scl0013844.2_257	XM_204072.3			38078899	XM_204072.3	Ephb2		ILMN_2622255	003830241	S	4735	GGCTCCCCTGTGAGCAAATGCAGGGAATCCGAGCAGAACAATCGGTTAGT						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IDA]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; A process that increases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48170] [evidence IMP]; Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA];  [goid 8046] [evidence IDA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IDA];  [goid 5005] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217265	ILMN_217265	EFNB3	NM_007911.4	NM_007911.4		13643	142367810	NM_007911.4	Efnb3	NP_031937.1	ILMN_2681212	001570433	S	3024	GGAACAGGAAGTTGATATTGCCATTGGGGAGGTGGCGGGGTATGGCCGTC	11	-	69367676-69367725	11qB3	Mus musculus ephrin B3 (Efnb3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The series of molecular signals generated as a consequence of an ephrin receptor binding to an ephrin [goid 48013] [evidence ISO]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The recognition of molecules at a choice point by an axon growth cone; at a choice point the growth cone determines the direction of its future growth [goid 16198] [evidence IMP]	Interacting selectively with an ephrin receptor [goid 46875] [evidence ISO]	LERK-8; Elk-L3; NLERK-2; EFL-6; ELF-3; Epl8	LERK-8; Elk-L3; NLERK-2; EFL-6; ELF-3; Epl8
Mus musculus	Riken	ILMN_202699	ILMN_202699	5133401H10RIK	ri|5133401H10|PX00021F22|AK019892|610					AK019892	5133401H10Rik		ILMN_2551611	004490373	S	446	CTAGGGCTCTGGGGGTTAGTAGCAGGATATGGGAAGACTGTGTGGGCTGG										
Mus musculus	RefSeq	ILMN_197518	ILMN_197518	LOC328443	XM_286615.2	XM_286615.2			38076399	XM_286615.2	LOC328443		ILMN_2528414	006330551	S	510	CCGCATGCTCTGAGACAGTTTCTTCCCAGGAGGGGATCAGCTTACTGGTG										
Mus musculus	RefSeq	ILMN_261006	ILMN_261006	SLC39A5	NM_028092.1	NM_028092.1		72002	21312453	NM_028092.1	Slc39a5	NP_082368.1	ILMN_3150519	002120626	A	1589	CCCTGGGTGTTTGGGACCACGGCTGGGGTTTTCCTCTATGTGGCCCTAGT	10	-	127799420-127799469	10qD3	Mus musculus solute carrier family 39 (metal ion transporter), member 5 (Slc39a5), mRNA.	The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence TAS]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence TAS]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	2010205A06Rik; Zip5; 1810013D05Rik	2010205A06Rik; Zip5; 1810013D05Rik
Mus musculus	RefSeq	ILMN_261006	ILMN_261006	SLC39A5	NM_028092.1	NM_028092.1		72002	21312453	NM_028092.1	Slc39a5	NP_082368.1	ILMN_3071741	002940347	I	3	ACGTGGCTTCCACTGCATCTGAAGGCTGAGCTCCTTCCCTCGGATCTCCT	10	-	127803414-127803463	10qD3	Mus musculus solute carrier family 39 (metal ion transporter), member 5 (Slc39a5), mRNA.	The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence TAS]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence TAS]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	2010205A06Rik; Zip5; 1810013D05Rik	2010205A06Rik; Zip5; 1810013D05Rik
Mus musculus	RefSeq	ILMN_197438	ILMN_236615	ZNF512B	XM_977462.2	XM_977462.2		269401	149250507	XM_977462.2	Znf512b	XP_982556.2	ILMN_1219778	005390440	S	5863	GCAAGATGTTTTGAGGTGAGCTTTGGTCCTGCCCGCCTTGTGGTCATCTG	2	-	181316911-181316960	2qH4	PREDICTED: Mus musculus zinc finger protein 512B (Znf512b), mRNA.					
Mus musculus	RefSeq	ILMN_200102	ILMN_200102	LOC384196	XM_357479.1	XM_357479.1			38080381	XM_357479.1	LOC384196		ILMN_1242634	002490482	S	459	GGAACAAGGACAAGTAAAGGCATCATTATTGCATGGGTCCTACAGGGGCA										
Mus musculus	RefSeq	ILMN_199498	ILMN_199498	LOC383579	XM_357133.1	XM_357133.1			38073514	XM_357133.1	LOC383579		ILMN_2535435	006900066	S	274	TACTGTCTGGCGGCAGAGTTACTTAACTTCCGGAGGGTGGGCTTGGAAGG										
Mus musculus	RefSeq	ILMN_224029	ILMN_235298	EPN1	NM_010147.3	NM_010147.3		13854	118129927	NM_010147.3	Epn1	NP_034277.1	ILMN_1250501	000830189	S	1967	GTCTCAGTCCTGTGCCCCCAGTTCCTGGAGCGCCACCCACCTACATCTCT	7	+	5049252-5049301	7qA1	Mus musculus epsin 1 (Epn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	MGC106041; AA269831; Ibp1	MGC106041; AA269831; Ibp1
Mus musculus	RefSeq	ILMN_214221	ILMN_214221	TMEM86A	NM_026436.3	NM_026436.3		67893	146134955	NM_026436.3	Tmem86a	NP_080712.1	ILMN_2645662	002750184	S	1628	CCAGCACACCAACAATGCTTTCTTCCAGCTCTGGGAGTGAGTTCTAAATG				7qB4	Mus musculus transmembrane protein 86A (Tmem86a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1810054O13Rik; AW742698; AI414959	1810054O13Rik; AW742698; AI414959
Mus musculus	RefSeq	ILMN_213522	ILMN_213522	NLRX1	NM_178420.2	NM_178420.2		270151	31341501	NM_178420.2	Nlrx1	NP_848507.1	ILMN_2637897	003840113	S	3261	GACTTGGATATGGAACATGTCACTTCTCCCTTAGCCTAGAAGGACTAAGG	9	-	44061065-44061114	9qA5.2	Mus musculus NLR family member X1 (Nlrx1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC034204	BC034204
Mus musculus	RefSeq	ILMN_213522	ILMN_213522	NLRX1	NM_178420.2	NM_178420.2		270151	31341501	NM_178420.2	Nlrx1	NP_848507.1	ILMN_2708222	006040403	S	2836	TAGCCTCGCTGACAGAAGGGACGGCGGTGTCTGAGTACTGGTCAGTGATC	9	-	44061490-44061539	9qA5.2	Mus musculus NLR family member X1 (Nlrx1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC034204	BC034204
Mus musculus	RefSeq	ILMN_213522	ILMN_213522	NLRX1	NM_178420.2	NM_178420.2		270151	31341501	NM_178420.2	Nlrx1	NP_848507.1	ILMN_2958484	001070487	S	3492	CTCAAATGCACAGGATCGATGGCTCCAAGGCTGCTAGGGACAAGTGGGCC	9	-	44060834-44060883	9qA5.2	Mus musculus NLR family member X1 (Nlrx1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC034204	BC034204
Mus musculus	RefSeq	ILMN_212324	ILMN_212324	FBXW13	NM_177598.3	NM_177598.3		211305	115299748	NM_177598.3	Fbxw13	NP_808266.1	ILMN_2625152	006130372	S	1371	GTGATGACAACTCATTCCATCCCCAGCTTTCTGATGGCATATATCTTGAC	9	-	109081805-109081854	9qF2	Mus musculus F-box and WD-40 domain protein 13 (Fbxw13), mRNA.				MGC141227; MGC157442; E330017E16	MGC141227; MGC157442; E330017E16
Mus musculus	RefSeq	ILMN_238877	ILMN_238877	OLFR293	NM_001011752.1	NM_001011752.1		257906	58801291	NM_001011752.1	Olfr293	NP_001011752.1	ILMN_2889746	000990086	S	294	GGCTGGATGTGTAGCACAGGTCTTTTTGGTCTTATTTTGTGCAGCTGTAG	7	+	93812467-93812516	7qD3	Mus musculus olfactory receptor 293 (Olfr293), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR221-3	MOR221-3
Mus musculus	RefSeq	ILMN_191795	ILMN_237899	4933417G07RIK	XR_002339.1	XR_002339.1		71182	94369549	XR_002339.1	4933417G07Rik		ILMN_2482245	005220403	S	1095	CCAGGAGTGCCCACACAGGCAACACTGGCTGTCCACCTACCTTACTGAGA	3	+	55652121-55652170	3qC	PREDICTED: Mus musculus RIKEN cDNA 4933417G07 gene (4933417G07Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_221124	ILMN_221124	ANXA1	NM_010730.2	NM_010730.2		16952	124517662	NM_010730.2	Anxa1	NP_034860.2	ILMN_1259252	000670240	S	962	GATCAGGATTATGGTCTCCCGTTCGGAAATTGACATGAATGAAATCAAAG	19	-	20449761-20449810	19qB	Mus musculus annexin A1 (Anxa1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The regulated release of arachidonic acid from a cell or group of cells [goid 50482] [evidence IMP]	Stops, prevents or reduces the activity of the enzyme phospholipase A2 [goid 19834] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Lpc-1; C430014K04Rik; Anx-A1; Lpc1; Anx-1	Lpc-1; C430014K04Rik; Anx-A1; Lpc1; Anx-1
Mus musculus	RefSeq	ILMN_221900	ILMN_221900	DOC2A	NM_010069.1	NM_010069.1		13446	33859539	NM_010069.1	Doc2a	NP_034199.1	ILMN_2741828	007550368	S	2077	GCTGTTACCTGCAAATATGCAACCACCCGTGCACAGGGCCACGTGGGAGT	7	+	133995758-133995807	7qF3	Mus musculus double C2, alpha (Doc2a), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209489	ILMN_322214	MBOAT2	NM_001083341.1	NM_001083341.1		67216	134053902	NM_001083341.1	Mboat2	NP_001076810.1	ILMN_1233752	004210309	S	342	GTACAAAGTGGGATTTCCTACTGCATCATGATCATAGCAGGAGTGGAGAG	12	+	25567601-25567650	12qA1.3	Mus musculus membrane bound O-acyltransferase domain containing 2 (Mboat2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	Oact2; AW547221; AU022889; 2810049G06Rik; Moact2	Oact2; AW547221; AU022889; 2810049G06Rik; Moact2
Mus musculus	RefSeq	ILMN_209489	ILMN_322214	MBOAT2	NM_001083341.1	NM_001083341.1		67216	134053902	NM_001083341.1	Mboat2	NP_001076810.1	ILMN_1214848	005700328	S	204	GCCTTGTTAGCAGCCGTTTGGTTTCGAACTTATCTACACTCAAGCAAAAC	12	+	25563083-25563132	12qA1.3	Mus musculus membrane bound O-acyltransferase domain containing 2 (Mboat2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	Oact2; AW547221; AU022889; 2810049G06Rik; Moact2	Oact2; AW547221; AU022889; 2810049G06Rik; Moact2
Mus musculus	RefSeq	ILMN_209489	ILMN_322214	MBOAT2	NM_001083341.1	NM_001083341.1		67216	134053902	NM_001083341.1	Mboat2	NP_001076810.1	ILMN_1229343	005550398	S	2097	CGAAGGGTTTTCTTAAGGTATCTTAGAGGACTGTGTGCATGGTGGGACTG	12	+	25644557-25644606	12qA1.3	Mus musculus membrane bound O-acyltransferase domain containing 2 (Mboat2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	Oact2; AW547221; AU022889; 2810049G06Rik; Moact2	Oact2; AW547221; AU022889; 2810049G06Rik; Moact2
Mus musculus	RefSeq	ILMN_212419	ILMN_212419	LGALS4	NM_010706.1	NM_010706.1		16855	46849704	NM_010706.1	Lgals4	NP_034836.1	ILMN_2968211	004540138	S	1183	GCTCCTCCTGGGGAAGGAAGCAGAAAGATCCCCGAGTTCCATCTAAGCTC	7	+	29626662-29626711	7qA3	Mus musculus lectin, galactose binding, soluble 4 (Lgals4), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	galectin-4	galectin-4
Mus musculus	RefSeq	ILMN_212419	ILMN_212419	LGALS4	NM_010706.1	NM_010706.1		16855	46849704	NM_010706.1	Lgals4	NP_034836.1	ILMN_2626235	006450278	S	1109	GGTTCCAAGCATTCCAAATGGTAGACACGCTGGAGATCAATGGTGACATC	7	+	29626588-29626637	7qA3	Mus musculus lectin, galactose binding, soluble 4 (Lgals4), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	galectin-4	galectin-4
Mus musculus	RefSeq	ILMN_191561	ILMN_191561	UBE2Q1	NM_027315.3	NM_027315.3		70093	142352603	NM_027315.3	Ube2q1	NP_081591.2	ILMN_1259048	000540193	S	1674	CCAGACTAGAGCCTCCTTACCTATGCTATGGGTTTTTAATTTATTTTCTC	3	+	89586519-89586568	3qF1	Mus musculus ubiquitin-conjugating enzyme E2Q (putative) 1 (Ube2q1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	AI854014; NICE-5; 2310012M18Rik; PRO3094; Ube2q; 1110002C01Rik	AI854014; NICE-5; 2310012M18Rik; PRO3094; Ube2q; 1110002C01Rik
Mus musculus	RefSeq	ILMN_191561	ILMN_191561	UBE2Q1	NM_027315.3	NM_027315.3		70093	142352603	NM_027315.3	Ube2q1	NP_081591.2	ILMN_1247833	002750187	S	2881	CTATCTCATAGCCTGTAAGGCTTCCTTCTGAACTTAACACCAGCCAGGGC	3	+	89587726-89587775	3qF1	Mus musculus ubiquitin-conjugating enzyme E2Q (putative) 1 (Ube2q1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	AI854014; NICE-5; 2310012M18Rik; PRO3094; Ube2q; 1110002C01Rik	AI854014; NICE-5; 2310012M18Rik; PRO3094; Ube2q; 1110002C01Rik
Mus musculus	RefSeq	ILMN_214419	ILMN_214419	2010100O12RIK	NM_025946.3	NM_025946.3		67067	142354890	NM_025946.3	2010100O12Rik	NP_080222.1	ILMN_2670427	004260224	S	174	GTGAAGATGGGCTTCGTCATGGGTTGCGCAGTGGGTATGGCGGCCGGGGC	2	+	155970249-155970298	2qH1	Mus musculus RIKEN cDNA 2010100O12 gene (2010100O12Rik), mRNA.				Romo1; AI853864; RP23-107C23.2	Romo1; AI853864; RP23-107C23.2
Mus musculus	RefSeq	ILMN_214419	ILMN_214419	2010100O12RIK	NM_025946.3	NM_025946.3		67067	142354890	NM_025946.3	2010100O12Rik	NP_080222.1	ILMN_1228094	006040112	S	59	TCCCCTGGCCGACGCCACGGCTGGTGACCAGGCCCTCACTGTCCTAGCAC	2	+	155970134-155970183	2qH1	Mus musculus RIKEN cDNA 2010100O12 gene (2010100O12Rik), mRNA.				Romo1; AI853864; RP23-107C23.2	Romo1; AI853864; RP23-107C23.2
Mus musculus	RefSeq	ILMN_210579	ILMN_210579	DLX1	NM_010053.1	NM_010053.1		13390	6753643	NM_010053.1	Dlx1	NP_034183.1	ILMN_2800505	002030592	S	2402	CGACCACAGAACACAAGTCATCACCCTGAATGCACGGGCTCTGGTGCAAG	2	+	71371660-71371709	2qC2	Mus musculus distal-less homeobox 1 (Dlx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The process whereby the developmental fate of a neuroblast becomes restricted such that it will develop into a GABAergic interneuron residing in the cerebral cortex [goid 21893] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte differentiation [goid 48715] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain [goid 21882] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Dlx; Dlx-1	Dlx; Dlx-1
Mus musculus	RefSeq	ILMN_211158	ILMN_328068	OAS1B	NR_003507.1	NR_003507.1		23961	145580611	NR_003507.1	Oas1b		ILMN_2613140	003180445	S	1181	AGACTTCATCTGGATAGCCCAGAGTGTCTTGGATATTGCCATCCTCCTGC				5qF	Mus musculus 2'-5' oligoadenylate synthetase 1B (Oas1b), transcribed RNA.		Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Oas1; Wnv; Oias-2; L1; Mmu-L1; Flv; Oias2	Oas1; Wnv; Oias-2; L1; Mmu-L1; Flv; Oias2
Mus musculus	RefSeq	ILMN_242093	ILMN_242093	RC3H1	NM_001024952.1	NM_001024952.1		381305	68131568	NM_001024952.1	Rc3h1	NP_001020123.1	ILMN_2789321	003390433	S	3554	GCAAGCAGAAAATGGCCAGCCCGAGCCCCAAAACAAGATCCGCACTGAGG	1	+	162895851-162895900	1qH2.1	Mus musculus RING CCCH (C3H) domains 1 (Rc3h1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of T-helper cell differentiation [goid 45623] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm551; N28103; mKIAA2025	Gm551; N28103; mKIAA2025
Mus musculus	RefSeq	ILMN_198988	ILMN_198988	LOC215733	XM_147364.2	XM_147364.2			38090357	XM_147364.2	LOC215733		ILMN_2533648	003450017	S	142	GAACTATCCCCAAATAGGACAGTCTGGACAACACCCCAACAGCGGTGCGG										
Mus musculus	Riken	ILMN_205810	ILMN_205810	A130064K07RIK	ri|A130064K07|PX00124I04|AK037927|2987					AK037927	A130064K07Rik		ILMN_1256110	001990209	S	2664	GAGGTGAGGCTGGAGATGGGAAGGGAGACGATGGGAGAGGCATTTACATC										
Mus musculus	RefSeq	ILMN_200826	ILMN_321016	PNMA5	NM_001100461.1	NM_001100461.1		385377	154689952	NM_001100461.1	Pnma5	NP_001093931.1	ILMN_2540141	001410682	S	150	GAAGGCTTACCTCCCTTGTGTGCATACAAGGTGATAGGCAGGATGTTCAG				XqA7.3	Mus musculus paraneoplastic antigen family 5 (Pnma5), mRNA.				mKIAA1934; KIAA1934	mKIAA1934; KIAA1934
Mus musculus	RefSeq	ILMN_218403	ILMN_246447	A930009N24	XM_898400.2	XM_898400.2		329876	94371946	XM_898400.2	A930009N24	XP_903493.1	ILMN_1219928	002340414	S	1781	CAACAGAGGTGGGTGTGGGGTGGCATAAGGAACATTGTCTGGTGGAGATC	4	+	85428763-85428812	4qC4	PREDICTED: Mus musculus hypothetical protein A930009N24 (A930009N24), mRNA.					
Mus musculus	RefSeq	ILMN_222922	ILMN_222922	SPDYB	NM_029048.3	NM_029048.3		74673	117676390	NM_029048.3	Spdyb	NP_083324.3	ILMN_2756787	004540301	S	1360	TTAGTATATGTTATATTATTAATAATCCTTATCGTTATATGTTGACTACA	5	-	143978404-143978453	5qG2	Mus musculus speedy homolog B (Drosophila) (Spdyb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of CDK activity [goid 45737] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]	4930445A17Rik; Spdy2; 4930451F05Rik	4930445A17Rik; Spdy2; 4930451F05Rik
Mus musculus	Riken	ILMN_202201	ILMN_202201	EYA4	ri|1700097D02|ZX00077B11|AK007097|856					AK007097	Eya4		ILMN_2547781	002320070	S	656	CATCCTAAGCTCAGGTGGTCTGTAAGGGCAAGCATGTGCACAGCAGGAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197228	ILMN_197228	LOC236509	XM_159713.1	XM_159713.1			20982666	XM_159713.1	LOC236509		ILMN_2527377	003890204	S	264	GAGAAAGACAATCCTCTTTGCCCAGTGCCTCACTCAAATGTATTTCTTTG										
Mus musculus	RefSeq	ILMN_212268	ILMN_212268	RBM6	NM_011251.1	NM_011251.1		19654	6755293	NM_011251.1	Rbm6	NP_035381.1	ILMN_1252216	004760338	S	2840	CAGTGACTATGAGGAAGAGGAAGAAGAGGAACAGGCTCCTCCTGTGCAGC	9	-	107640866-107640915	9qF1	Mus musculus RNA binding motif protein 6 (Rbm6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			mKIAA4015; g16; KIAA4015; NY-LU-12; 4930506F14Rik; Def-3	mKIAA4015; g16; KIAA4015; NY-LU-12; 4930506F14Rik; Def-3
Mus musculus	RefSeq	ILMN_212268	ILMN_212268	RBM6	NM_011251.1	NM_011251.1		19654	6755293	NM_011251.1	Rbm6	NP_035381.1	ILMN_2624587	007000382	S	2829	TATGGAGGAGACAGTGACTATGAGGAAGAGGAAGAAGAGGAACAGGCTCC	9	-	107640877-107640926	9qF1	Mus musculus RNA binding motif protein 6 (Rbm6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			mKIAA4015; g16; KIAA4015; NY-LU-12; 4930506F14Rik; Def-3	mKIAA4015; g16; KIAA4015; NY-LU-12; 4930506F14Rik; Def-3
Mus musculus	RefSeq	ILMN_185894	ILMN_322124	2310051E17RIK	XM_001479552.1	XM_001479552.1		70273	149270711	XM_001479552.1	2310051E17Rik	XP_001479602.1	ILMN_2430906	004050037	S	3778	TGTTCTTTCACAGCGGATGAATGGTCTGGAACACTGTAAGATACTGATCT					PREDICTED: Mus musculus RIKEN cDNA 2310051E17 gene (2310051E17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214906	ILMN_214906	GRM6	NM_173372.1	NM_173372.1		108072	27734061	NM_173372.1	Grm6	NP_775548.1	ILMN_3162125	000610092	S	3269	GGTGGTTTTCTCCTCTGTGACCTCTTCTAGAGTCAGTTAGCCATGGTCTG	11	+	50679638-50679687	11qB1.3	Mus musculus glutamate receptor, metabotropic 6 (Grm6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A G-protein coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity [goid 1642] [evidence TAS]	Gprc1f; BC021919; mGluR6; Gm3	Gprc1f; BC021919; mGluR6; Gm3
Mus musculus	RefSeq	ILMN_215353	ILMN_215353	STRA13	NM_016665.1	NM_016665.1		20892	12025529	NM_016665.1	Stra13	NP_057874.1	ILMN_2836023	002120064	S	702	GCAGCCTTGCATTATAAATAAACCAGCTGCTGGCAGTGCTCCTTCTTGCC	11	-	120572377-120572426	11qE2	Mus musculus stimulated by retinoic acid 13 (Stra13), mRNA.					
Mus musculus	RefSeq	ILMN_215353	ILMN_215353	STRA13	NM_016665.1	NM_016665.1		20892	12025529	NM_016665.1	Stra13	NP_057874.1	ILMN_1226798	003310332	S	54	AGGGTCGTGGGTGCCTGTCGCTGCCTACCTTTTGCCTTTCCCTGGTCGTT	11	-	120573963-120574012	11qE2	Mus musculus stimulated by retinoic acid 13 (Stra13), mRNA.					
Mus musculus	RefSeq	ILMN_249398	ILMN_249398	OLFR1024	NM_001005230.1	NM_001005230.1		257900	52421325	NM_001005230.1	Olfr1024	NP_001005230.1	ILMN_3160305	004050735	S	768	CTATGGTTCCCTCTTCTGCATGTACCTGAGACCAGCAAATGAGAGGTCTG	2	-	85744392-85744441	2qD	Mus musculus olfactory receptor 1024 (Olfr1024), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR197-1	MOR197-1
Mus musculus	MEEBO	ILMN_189697	ILMN_189697	C030009J22RIK	scl42860.1.1_12						C030009J22Rik		ILMN_2463583	005820148	S	7	ATAACTGTGACCTCCTGCACTGTGAATGCTCTGTGATATGAGATTCTTAG										
Mus musculus	RefSeq	ILMN_198166	ILMN_235792	TRIM40	NM_001033235.2	NM_001033235.2		195359	141802270	NM_001033235.2	Trim40	NP_001028407.1	ILMN_2530713	005360139	S	818	GAGGCTAGCGGACATCTCTTGTGTGAGGAATGCCTCCAATCCCCTGAACA	17	-	37074282-37074331	17qB1	Mus musculus tripartite motif-containing 40 (Trim40), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm35; Gm865; Gm319	Gm35; Gm865; Gm319
Mus musculus	RefSeq	ILMN_253619	ILMN_253619	GTPBP8	NM_025332.1	NM_025332.1		66067	21313622	NM_025332.1	Gtpbp8	NP_079608.1	ILMN_2799368	003520400	S	992	TCGGCATTAAGACCTGCATTACCCTGAAGCAAGAACAAATGCGCTGGGGG	16	-	44658469-44658518	16qB4	Mus musculus GTP-binding protein 8 (putative) (Gtpbp8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC130126; MGC130125; 0610037H22Rik	MGC130126; MGC130125; 0610037H22Rik
Mus musculus	RefSeq	ILMN_221597	ILMN_221597	OAS1D	NM_133893.1	NM_133893.1		100535	19527107	NM_133893.1	Oas1d	NP_598654.1	ILMN_2929966	003120068	S	1505	CCTGGAGCCCTGGGAATCTGGCCAGTGTTCATCAAGGTGCACTGTTTCTG	5	+	121182081-121182130	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1D (Oas1d), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor [goid 51348] [evidence IDA]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]; Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. Requires binding of double-stranded RNA [goid 1730] [evidence IDA]	oasl8; AA536864; C85127	oasl8; AA536864; C85127
Mus musculus	RefSeq	ILMN_223242	ILMN_223242	LGALS12	NM_019516.3	NM_019516.3		56072	142365081	NM_019516.3	Lgals12	NP_062389.1	ILMN_2761326	004210176	S	2624	CTTAGTATACTATACTAAATTTAGGGAATAAAATTTATTTGGTGTTGATT	19	-	7671232-7671281	19qA	Mus musculus lectin, galactose binding, soluble 12 (Lgals12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence ISA]	Interacting selectively with lactose, a disaccharide of glucose and galactose, the carbohydrate of milk [goid 30395] [evidence ISA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	AW987437; Grip1	AW987437; Grip1
Mus musculus	MEEBO	ILMN_222617	ILMN_222617	4832428G11RIK	scl16642.9.1_198	XM_136692.3			38049560	XM_136692.3	4832428G11Rik		ILMN_2752338	006110402	S	2776	GCCACTTATTTGTACAACCCATTAAAAGCCAGGGTTGGCGCTCTAGAACG										
Mus musculus	RefSeq	ILMN_195726	ILMN_254506	9630033F20RIK	NM_177003.4	NM_177003.4		319801	141802664	NM_177003.4	9630033F20Rik	NP_795977.1	ILMN_1260001	005550253	S	1262	ACGCTGCGTATTTGCAGTGATCCAAAGTGTTCAGAGTGAAGCTTCAGATC	6	-	127037459-127037508	6qF3	Mus musculus RIKEN cDNA 9630033F20 gene (9630033F20Rik), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	C79710; AI595337; AA793651; C85509	C79710; AI595337; AA793651; C85509
Mus musculus	RefSeq	ILMN_211825	ILMN_211825	NIPSNAP1	NM_008698.2	NM_008698.2		18082	118130691	NM_008698.2	Nipsnap1	NP_032724.1	ILMN_2619861	003990397	S	1792	CCGGTACCTCATGAACCCCTGCTTAGCATGGTTGTGCTACCATCCAGGAG	11	+	4794121-4794170	11qA1	Mus musculus 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans) (Nipsnap1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_209867	ILMN_209867	B230362M20RIK	scl0320835.1_260	NM_177273.1			46849809	NM_177273.1	B230362M20Rik		ILMN_2599953	004830719	S	1600	GTGTACTCCCTAACAGCTAGTCACCCACTTTGTGTGATTAGGCATGAACA										
Mus musculus	RefSeq	ILMN_217710	ILMN_217710	MKKS	NM_021527.1	NM_021527.1		59030	10946953	NM_021527.1	Mkks	NP_067502.1	ILMN_2814350	007200068	S	2512	GCAAACTAGTTGAGGTGTCTAAGAGAGCATACTGTTCTCTCCCAAAGGCC	2	-	136699921-136699970	2qF3	Mus musculus McKusick-Kaufman syndrome protein (Mkks), mRNA.	A cilium that consists of a 9 + 2 arrangement of microtubules, radial spokes, and a dynein apparatus. Motile cilia, found on cells that line the lumenal ducts of various tissues, beat with a characteristic whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface [goid 31514] [evidence IMP]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The assembly of a flagellum. In bacteria, this is a whiplike motility appendage present on the surface of some species; in eukaryotes, flagella are threadlike protoplasmic extensions used to propel flagellates and sperm. Flagella are composed of flagellin and have the same basic structure as cilia but are longer in proportion to the cell and present in much smaller numbers [goid 9296] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IGI]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; A process that is carried out at the cellular level and by which the structure of a cilium is organized. Morphogenesis pertains to the creation of form [goid 60271] [evidence IMP]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking [goid 21756] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI957237; Bbs6; 1300013E18Rik; MGC143766; AI463362	AI957237; Bbs6; 1300013E18Rik; MGC143766; AI463362
Mus musculus	RefSeq	ILMN_217710	ILMN_217710	MKKS	NM_021527.1	NM_021527.1		59030	10946953	NM_021527.1	Mkks	NP_067502.1	ILMN_1257332	004590392	S	55	TGGTTGGTTGCTGTGCAAGCGCGATTTCTGGTTTCTGGTGGTGAAGGTGG	2	-	136716810-136716859	2qF3	Mus musculus McKusick-Kaufman syndrome protein (Mkks), mRNA.	A cilium that consists of a 9 + 2 arrangement of microtubules, radial spokes, and a dynein apparatus. Motile cilia, found on cells that line the lumenal ducts of various tissues, beat with a characteristic whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface [goid 31514] [evidence IMP]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The assembly of a flagellum. In bacteria, this is a whiplike motility appendage present on the surface of some species; in eukaryotes, flagella are threadlike protoplasmic extensions used to propel flagellates and sperm. Flagella are composed of flagellin and have the same basic structure as cilia but are longer in proportion to the cell and present in much smaller numbers [goid 9296] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IGI]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; A process that is carried out at the cellular level and by which the structure of a cilium is organized. Morphogenesis pertains to the creation of form [goid 60271] [evidence IMP]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking [goid 21756] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI957237; Bbs6; 1300013E18Rik; MGC143766; AI463362	AI957237; Bbs6; 1300013E18Rik; MGC143766; AI463362
Mus musculus	RefSeq	ILMN_217710	ILMN_217710	MKKS	NM_021527.1	NM_021527.1		59030	10946953	NM_021527.1	Mkks	NP_067502.1	ILMN_1246701	000510315	S	2597	TACTTGTATACTTAAGGAAGATTATGGTTGTTAAATAGAAATGTATAGAC	2	-	136699836-136699885	2qF3	Mus musculus McKusick-Kaufman syndrome protein (Mkks), mRNA.	A cilium that consists of a 9 + 2 arrangement of microtubules, radial spokes, and a dynein apparatus. Motile cilia, found on cells that line the lumenal ducts of various tissues, beat with a characteristic whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface [goid 31514] [evidence IMP]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The assembly of a flagellum. In bacteria, this is a whiplike motility appendage present on the surface of some species; in eukaryotes, flagella are threadlike protoplasmic extensions used to propel flagellates and sperm. Flagella are composed of flagellin and have the same basic structure as cilia but are longer in proportion to the cell and present in much smaller numbers [goid 9296] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IMP]; The assembly of a sensory cilium, a primary cilium found on sensory neurons that contains an a 9+0 axonemal arrangement of microtubules [goid 35058] [evidence IGI]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]; A process that is carried out at the cellular level and by which the structure of a cilium is organized. Morphogenesis pertains to the creation of form [goid 60271] [evidence IMP]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]; The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking [goid 21756] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI957237; Bbs6; 1300013E18Rik; MGC143766; AI463362	AI957237; Bbs6; 1300013E18Rik; MGC143766; AI463362
Mus musculus	RefSeq	ILMN_190805	ILMN_190805	ANO4	NM_178773.4	NM_178773.4		320091	52546978	NM_178773.4	Ano4	NP_848888.3	ILMN_2973774	002940301	S	3474	AGATGGCCGACTGAGGTGGAGTCCCGCTGTTGTGAAATCACGCTGCAGTC	10	-	88412332-88412381	10qC1	Mus musculus anoctamin 4 (Ano4), mRNA.				A330096O15Rik	A330096O15Rik
Mus musculus	RefSeq	ILMN_190805	ILMN_190805	ANO4	NM_178773.4	NM_178773.4		320091	52546978	NM_178773.4	Ano4	NP_848888.3	ILMN_2973779	001450739	S	3174	ACCAGACCTCCCGAAAGATCTAAGGGACCGGATGAGGAGAGAGAAGTACT	10	-	88415039-88415088	10qC1	Mus musculus anoctamin 4 (Ano4), mRNA.				A330096O15Rik	A330096O15Rik
Mus musculus	RefSeq	ILMN_213413	ILMN_213413	TMCO5	NM_026104.3	NM_026104.3		67356	146135017	NM_026104.3	Tmco5	NP_080380.1	ILMN_3162129	007330520	S	882	CGCGCTGCCTAAGATACTGAGCAGGGACGTCTTGTGGAAGCTGAGATGTT				2qE5	Mus musculus transmembrane and coiled-coil domains 5 (Tmco5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700095F04Rik	1700095F04Rik
Mus musculus	RefSeq	ILMN_211750	ILMN_211750	HOMER1	NM_152134.1	NM_152134.1		26556	41281770	NM_152134.1	Homer1	NP_687036.1	ILMN_2718149	002260722	S	2719	GTGAAGAGGGTTCTTCTTAGTGTATGCTTGGGTACCTAACTCTGGAGTCA	13	+	94173516-94173565	13qC3	Mus musculus homer homolog 1 (Drosophila) (Homer1), transcript variant d, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [evidence IDA]	The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor coupled to effectors through GTP-binding proteins [goid 7216] [evidence TAS]; A process whereby force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control [goid 3009] [evidence IMP]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel [goid 32236] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SYN47; Ves-1; PSD-Zip45	SYN47; Ves-1; PSD-Zip45
Mus musculus	RefSeq	ILMN_211750	ILMN_211750	HOMER1	NM_152134.1	NM_152134.1		26556	41281770	NM_152134.1	Homer1	NP_687036.1	ILMN_1226785	003870040	S	2397	GGTCAAGCCGAGAGGACTGCATCTAAATTGTGACTGTGGCAGATGGGTCT	13	+	94173194-94173243	13qC3	Mus musculus homer homolog 1 (Drosophila) (Homer1), transcript variant d, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [evidence IDA]	The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor coupled to effectors through GTP-binding proteins [goid 7216] [evidence TAS]; A process whereby force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control [goid 3009] [evidence IMP]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel [goid 32236] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SYN47; Ves-1; PSD-Zip45	SYN47; Ves-1; PSD-Zip45
Mus musculus	RefSeq	ILMN_199532	ILMN_199532	LOC382687	XM_356626.1	XM_356626.1			38074012	XM_356626.1	LOC382687		ILMN_2535563	004780280	S	278	ACCCCATGAGTGTGAAATCAGAACTCCTGAAAGCTATTGAATCTGGGGGC										
Mus musculus	RefSeq	ILMN_213889	ILMN_213889	POLR3F	NM_029763.3	NM_029763.3		70408	70887770	NM_029763.3	Polr3f	NP_084039.2	ILMN_2641857	003890470	S	1352	GGAACGAGAAGATGTTCACTAGAGTTGCTTCATTGAAAACTCATCGGGGT	2	+	144364707-144364756	2qG1	Mus musculus polymerase (RNA) III (DNA directed) polypeptide F (Polr3f), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC11656; 3010019O03Rik; RPC6; 2810411G20Rik; 3110032A07Rik; RPC39	MGC11656; 3010019O03Rik; RPC6; 2810411G20Rik; 3110032A07Rik; RPC39
Mus musculus	Riken	ILMN_206955	ILMN_206955	KLHL2	ri|D930050K07|PX00204O15|AK086772|3821					AK086772	Klhl2		ILMN_1225369	003890440	S	3304	GAGAGTGGTTCATCTGGAGACCTGGGCACCGGCTTATGAATGGATGGAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]		
Mus musculus	RefSeq	ILMN_215636	ILMN_215636	OLFR1342	NM_146713.1	NM_146713.1		258708	22129410	NM_146713.1	Olfr1342	NP_666924.1	ILMN_1245835	006020192	S	575	GTGCAGACACATCCTTCAATGACCGCTTGGACTTCATCCTGGGTTTCATC	4	-	118362431-118362480	4qD2.1	Mus musculus olfactory receptor 1342 (Olfr1342), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISO]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISO]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISO]	MOR258-3	MOR258-3
Mus musculus	RefSeq	ILMN_256833	ILMN_256833	MPZ	NM_008623.2	NM_008623.2		17528	54262153	NM_008623.2	Mpz	NP_032649.1	ILMN_2817329	004060692	S	1601	TTCGTTTGTTTACCTGAGCCCACGGCCCCATGACCGAGGACCAATGACGT	1	+	172997406-172997455	1qH3	Mus musculus myelin protein zero (Mpz), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The maintenance of junctions between cells [goid 45217] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	P-zero; P0; Mpp	P-zero; P0; Mpp
Mus musculus	RefSeq	ILMN_212649	ILMN_212649	BC014805	NM_146232.1	NM_146232.1		236149	22122800	NM_146232.1	BC014805	NP_666344.1	ILMN_2959409	004010609	S	1779	CAGCCTCTGCCTGACTCCATCCAAGATGTAGAATGTGGGTGGGAAAGTTC	19	-	7856648-7856660:7857272-7857308	19qA	Mus musculus cDNA sequence BC014805 (BC014805), mRNA.				MGC25980	MGC25980
Mus musculus	RefSeq	ILMN_196535	ILMN_234179	GCC2	NM_027375.2	NM_027375.2		70297	61742805	NM_027375.2	Gcc2	NP_081651.2	ILMN_2691802	003170228	S	6454	GTGACCAGCAATAAGGAACTGTAATGACTGATATTTCTATTAAATGCACT	10	+	57768283-57768332	10qB4	Mus musculus GRIP and coiled-coil domain containing 2 (Gcc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			0610043A03Rik; 2600014C01Rik; 2210420P05Rik; AW112121; mKIAA0336	0610043A03Rik; 2600014C01Rik; 2210420P05Rik; AW112121; mKIAA0336
Mus musculus	RefSeq	ILMN_201805	ILMN_234179	GCC2	NM_027375.2	NM_027375.2		70297	61742805	NM_027375.2	Gcc2	NP_081651.2	ILMN_1212649	000020450	S	81	CCGGGACCCCGAAATCCAAGCTAGAAACGTTGCCCAGAGAAGATCTCATC	10	+	57718611-57718630:57719568-57719597	10qB4	Mus musculus GRIP and coiled-coil domain containing 2 (Gcc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			0610043A03Rik; 2600014C01Rik; 2210420P05Rik; AW112121; mKIAA0336	0610043A03Rik; 2600014C01Rik; 2210420P05Rik; AW112121; mKIAA0336
Mus musculus	RefSeq	ILMN_234179	ILMN_234179	GCC2	NM_027375.2	NM_027375.2		70297	61742805	NM_027375.2	Gcc2	NP_081651.2	ILMN_3003335	000990072	S	6231	GGTGAGGTTGTCGATCTTCCTAAACTGTGAATGTGAGTATGCCCAGCGGC	10	+	57768060-57768109	10qB4	Mus musculus GRIP and coiled-coil domain containing 2 (Gcc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			0610043A03Rik; 2600014C01Rik; 2210420P05Rik; AW112121; mKIAA0336	0610043A03Rik; 2600014C01Rik; 2210420P05Rik; AW112121; mKIAA0336
Mus musculus	RefSeq	ILMN_221628	ILMN_221628	C1QTNF6	NM_028331.2	NM_028331.2		72709	27754002	NM_028331.2	C1qtnf6	NP_082607.2	ILMN_2738122	002320053	S	1998	CATGCTGCCAAGACAGGCCCTGGGGGAGGTTGTGAAAAAAGCAAGACCTC	15	-	78350895-78350944	15qE1	Mus musculus C1q and tumor necrosis factor related protein 6 (C1qtnf6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW743441; 2810036M19Rik; CTRP6	AW743441; 2810036M19Rik; CTRP6
Mus musculus	RefSeq	ILMN_186198	ILMN_238073	DEPDC5	NM_177786.3	NM_177786.3		277854	141803514	NM_177786.3	Depdc5	NP_808454.1	ILMN_1235098	006180750	S	3433	GGAGTGGAATTGGAAGTTCCTGAAGCACCGTCCACACAAGCCTGTACCTT	5	+	33298869-33298918	5qB1	Mus musculus DEP domain containing 5 (Depdc5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA0645; AV016528; D5Ertd477e; mKIAA0645	KIAA0645; AV016528; D5Ertd477e; mKIAA0645
Mus musculus	Riken	ILMN_205778	ILMN_205778	NRP2	ri|D230012O11|PX00187H10|AK051873|2668					AK051873	Nrp2		ILMN_1216066	005960563	S	2339	GAAGAGGTGTGGTCAGTAGGCAGAGTGTGGAGCCTATTCGCTCAGAGGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IC ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 17154] [evidence IPI]		
Mus musculus	RefSeq	ILMN_253124	ILMN_253124	LINGO3	NM_001013758.1	NM_001013758.1		237403	85701455	NM_001013758.1	Lingo3	NP_001013780.1	ILMN_2819496	001850035	S	3087	CCCCCCGACTTTCCCATCACATACAAACTGATTGACAGGACACGAATGAC	10	-	80295839-80295888	10qC1	Mus musculus leucine rich repeat and Ig domain containing 3 (Lingo3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI851712	AI851712
Mus musculus	MEEBO	ILMN_209186	ILMN_209186	CRBN	scl28573.11_3	NM_175357.1			28202022	NM_175357.1	Crbn		ILMN_2593356	000110709	S	2429	CAACCTGCAAAACCAGTAAGCTTCATCAAATTCAGGTGTTCTCTCTGAAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]		
Mus musculus	Riken	ILMN_204472	ILMN_204472	B130018P07RIK	ri|B130018P07|PX00157H23|AK045005|3932					AK045005	B130018P07Rik		ILMN_2565243	006110373	S	3756	GTGTGTAACTCTCAGGTCAAGCACTTGGAGCAGAAGGCGTGTTTTAGCTG										
Mus musculus	RefSeq	ILMN_199471	ILMN_199471	LOC383532	XM_357107.1	XM_357107.1			38049693	XM_357107.1	LOC383532		ILMN_2535327	004830392	S	3	GGCCAGAACCGTGGGTTTGCAGAAACTCTTTTATACTTCCGGCCAGAGAC										
Mus musculus	RefSeq	ILMN_190013	ILMN_238193	OSBPL6	NM_145525.2	NM_145525.2		99031	68131559	NM_145525.2	Osbpl6	NP_663500.2	ILMN_1219286	005360168	S	491	GGCATATCCCCTGCTCATAAAACATCCACTCCGACCCATAGAAGTGCCTC	2	+	76362118-76362167	2qC3	Mus musculus oxysterol binding protein-like 6 (Osbpl6), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]		KIAA4128; MGC30542; AI596402; ORP-6; mKIAA4128; 1110062M20Rik	KIAA4128; MGC30542; AI596402; ORP-6; mKIAA4128; 1110062M20Rik
Mus musculus	RefSeq	ILMN_195369	ILMN_238193	OSBPL6	NM_145525.2	NM_145525.2		99031	68131559	NM_145525.2	Osbpl6	NP_663500.2	ILMN_1221789	002940114	S	3356	GACAGCCCCGTTCTTTGGTAAACTGGAGACATAGAGCTAGCCAATATCCC	2	+	76434019-76434039:76434040-76434068	2qC3	Mus musculus oxysterol binding protein-like 6 (Osbpl6), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]		KIAA4128; MGC30542; AI596402; ORP-6; mKIAA4128; 1110062M20Rik	KIAA4128; MGC30542; AI596402; ORP-6; mKIAA4128; 1110062M20Rik
Mus musculus	MEEBO	ILMN_193638	ILMN_193638	IGKV2-137_AJ231263_IG_KAPPA_VARIABLE_2-137_15	IGKV2-137_AJ231263_Ig_kappa_variable_2-137_15						IGKV2-137_AJ231263_Ig_kappa_variable_2-137_15		ILMN_2499056	000070619	S	10	GGGCTGCTTGTGCTCTGGATCCCTGGAGCCATTGGGGATATTGTGATGAC										
Mus musculus	Riken	ILMN_204332	ILMN_204332	6030458A17RIK	ri|6030458A17|PX00057L19|AK031595|2906					AK031595	6030458A17Rik		ILMN_1244167	003140010	S	2498	GCAGCTATCGGCTGTGAACACTCTGAAGCAGCCCCGTATCCAACACCTAG										
Mus musculus	MEEBO	ILMN_219772	ILMN_219772	3321401G04RIK	scl077574.1_0	XM_133096.5			38083966	XM_133096.5	3321401G04Rik		ILMN_1229200	005310156	S	3187	CCCAGTCTACTCAGCCCCGACCCTTGTACATAGAAAACAGAAAACCTACC										
Mus musculus	RefSeq	ILMN_199926	ILMN_313250	PRAMEL5	NM_001085418.1	NM_001085418.1		384077	146134516	NM_001085418.1	Pramel5	NP_001078887.1	ILMN_1246776	001470722	S	1557	GGAGAGGTCTTTCCTGGGCTCTGATAAATGGAGAGCAGGTCTCAAGAGAC				4qE1	Mus musculus preferentially expressed antigen in melanoma like 5 (Pramel5), mRNA.				OTTMUSG00000010540; MGC60806	OTTMUSG00000010540; MGC60806
Mus musculus	RefSeq	ILMN_217995	ILMN_217995	6330500D04RIK	NM_178658.4	NM_178658.4		193385	123314453	NM_178658.4	6330500D04Rik	NP_848773.3	ILMN_3151281	004010253	A	1519	CAAAGAGTGATACGGTAGAGCCCGGGAAGCCGGGTGTGGCTACAAGGTCT	13	+	24793208-24793257	13qA3.1	Mus musculus RIKEN cDNA 6330500D04 gene (6330500D04Rik), transcript variant 3, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	E430013J17Rik; 1700108N18Rik; AI225904	E430013J17Rik; 1700108N18Rik; AI225904
Mus musculus	RefSeq	ILMN_217995	ILMN_217995	6330500D04RIK	NM_178658.4	NM_178658.4		193385	123314453	NM_178658.4	6330500D04Rik	NP_848773.3	ILMN_3072437	004210390	I	20	AGCTAAAGTGGCTCCCGTGTGTCCTAGGTTGTGAGTGCCTTCAGCTCCTG	13	+	24706498-24706547	13qA3.1	Mus musculus RIKEN cDNA 6330500D04 gene (6330500D04Rik), transcript variant 3, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	E430013J17Rik; 1700108N18Rik; AI225904	E430013J17Rik; 1700108N18Rik; AI225904
Mus musculus	MEEBO	ILMN_195060	ILMN_195060	ZFP292	scl070578.1_64				51709850	XM_355564	Zfp292		ILMN_1215961	000730626	S	409	ACGCGACGGAGCGGGCTGCGAAGATGGCGGACGATGAGGCCGAGCAGGAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_208857	ILMN_208857	HDAC9	NM_024124.2	NM_024124.2		79221	70778860	NM_024124.2	Hdac9	NP_077038.2	ILMN_2644302	004540369	S	2046	ATTTAGCTCCAGGATTTGTAATTAAAGTCATTATTTGAGTATAAGATAGG	12	-	35058679-35058691:35058692-35058728	12qA3	Mus musculus histone deacetylase 9 (Hdac9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]	mKIAA0744; Mitr; Hdac7b; HD9; HD7B; HDRP; AV022454; D030072B18Rik	mKIAA0744; Mitr; Hdac7b; HD9; HD7B; HDRP; AV022454; D030072B18Rik
Mus musculus	RefSeq	ILMN_208857	ILMN_208857	HDAC9	NM_024124.2	NM_024124.2		79221	70778860	NM_024124.2	Hdac9	NP_077038.2	ILMN_2590403	002710575	S	1792	ACAACTGAAGCAACCAGGCAGCCACCTTGAAGAAGCAGAGGAGGAGCTTC	12	-	35058933-35058982	12qA3	Mus musculus histone deacetylase 9 (Hdac9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]	mKIAA0744; Mitr; Hdac7b; HD9; HD7B; HDRP; AV022454; D030072B18Rik	mKIAA0744; Mitr; Hdac7b; HD9; HD7B; HDRP; AV022454; D030072B18Rik
Mus musculus	MEEBO	ILMN_211375	ILMN_211375	CDK2	scl37352.6_41	NM_016756.1			7949019	NM_016756.1	Cdk2		ILMN_2717613	001740039	S	1133	GGGCTTGCACGTCACTCTGGTCTGTTCATCGTGGTTCACAGGGCAAGGTG						Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males [goid 805] [evidence IDA]; The sex chromosome present in males of species in which the male is the heterogametic sex; generally, the sex chromosome that pairs with the X chromosome in the heterogametic sex. The Y chromosome is absent from the cells of females and present in one copy in the somatic cells of males [goid 806] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IGI]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IGI]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221353	ILMN_221353	RAMP1	NM_016894.2	NM_016894.2		51801	110625604	NM_016894.2	Ramp1	NP_058590.1	ILMN_2734391	004010243	S	483	TCGTGTAGGTATCCCAGGTGATGAGGGATTGGGGAACCATGGGCCTAGCC	1	+	93119931-93119938:93119939-93119980	1qD	Mus musculus receptor (calcitonin) activity modifying protein 1 (Ramp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IPI]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 15027] [evidence IDA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209845	ILMN_209845	MAP2K6	NM_011943.1	NM_011943.1		26399	33859653	NM_011943.1	Map2k6	NP_036073.1	ILMN_1215521	006100056	S	124	CCACCTTGACTCCCTGAAAGTCCATCTGCTGCATCGGTCAAGAGAAACTC	11	+	110215335-110215384	11qE2	Mus musculus mitogen activated protein kinase kinase 6 (Map2k6), mRNA.		Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IMP]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IPI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MEK6; Prkmk6; MKK6; SAPKK3	MEK6; Prkmk6; MKK6; SAPKK3
Mus musculus	RefSeq	ILMN_217536	ILMN_312022	RP23-297J14.5	NM_001099322.1	NM_001099322.1		100041400	150010569	NM_001099322.1	Rp23-297j14.5	NP_001092792.1	ILMN_2684413	003370349	S	1416	GCTTATGAGACTCATTTAAACTGTCTTTGGTTTAACACGGGTTTGTGTCA				11qB1.3	Mus musculus similar to oxidative stress responsive 1 (Rp23-297j14.5), mRNA.					
Mus musculus	MEEBO	ILMN_192723	ILMN_192723	RANGAP1	scl0002569.1_91				31982567	NM_011241	Rangap1		ILMN_2490719	005910010	S	3	AGGGCGTTTGTGTATTGACCGTTTGTGCCTGCTCTCTCCCAGGCCGTCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Ran family [goid 5098] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192723	ILMN_192723	RANGAP1	scl0002569.1_91				31982567	NM_011241	Rangap1		ILMN_1250837	004830528	S	2867	TCTGTGACTTCCCGAAGTGGCTGCTTGGCCACCTCCTACTTCCCGTTGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Ran family [goid 5098] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192723	ILMN_192723	RANGAP1	scl0002569.1_91				31982567	NM_011241	Rangap1		ILMN_1236888	005290112	S	799	CCAAGGCAAGCCCCTGGCCCTGAAGGTGTTTGTGGCTGGCAGAAATCGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Ran family [goid 5098] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210226	ILMN_210226	FUNDC2	NM_026126.3	NM_026126.3		67391	142366263	NM_026126.3	Fundc2	NP_080402.2	ILMN_2603439	001450500	S	775	TACCTTATTACATGTTACATGAAAAGGAACCAAATACATTTGCCTTTAAG	X	+	72637573-72637576:72639649-72639694	XqA7.3	Mus musculus FUN14 domain containing 2 (Fundc2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DC44; HCBP6; 4833415N24Rik	DC44; HCBP6; 4833415N24Rik
Mus musculus	RefSeq	ILMN_212826	ILMN_310602	LOC100048082	XR_034226.1	XR_034226.1		100048082	149259602	XR_034226.1	LOC100048082		ILMN_2630799	002140193	S	4570	TGAGGTAGATGAACCAGAGGTTAGTATTCAGGGGCTGAACCTCAGGACCC					PREDICTED: Mus musculus similar to Serine/threonine-protein kinase QSK (LOC100048082), misc RNA.					
Mus musculus	Riken	ILMN_206161	ILMN_206161	C920025C15RIK	ri|C920025C15|PX00178M08|AK083375|3129					AK083375	C920025C15Rik		ILMN_1242664	006200497	S	2385	GAGTGGCTTTGCTCTTCATTGCTCAGGGCCAGCATCTGCTAAAGGCTTTG										
Mus musculus	RefSeq	ILMN_216351	ILMN_216351	TTC36	NM_138951.1	NM_138951.1		192653	20336733	NM_138951.1	Ttc36	NP_620401.1	ILMN_2670057	004560762	S	481	CGCGCCGCCCGCCAGAGCTTCGTGCAGAGCGGGCTACTGGCGAGATTTCA	9	-	44607716-44607765	9qA5.2	Mus musculus tetratricopeptide repeat domain 36 (Ttc36), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC25970; MGC37912; MGC37247; MGC37838	MGC25970; MGC37912; MGC37247; MGC37838
Mus musculus	RefSeq	ILMN_249456	ILMN_249456	OAS1A	NM_145211.1	NM_145211.1		246730	21630282	NM_145211.1	Oas1a	NP_660212.1	ILMN_2924839	003290767	S	1715	CATTAGCGGTTCTCTGGCTACACATGGACATGGAACACTGAGATTGTGGC	5	-	121346371-121346420	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1A (Oas1a), mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of the viral life cycle, the set of processes by which a virus reproduces and spreads among hosts [goid 48525] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IDA]; Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. Requires binding of double-stranded RNA [goid 1730] [evidence IDA]	L3	L3
Mus musculus	Riken	ILMN_201881	ILMN_201881	4921530G03RIK	ri|4921530G03|PX00015I09|AK014984|2055					AK014984	4921530G03Rik		ILMN_1244497	000380537	S	1759	AGCATGAGGAGCAGGAGGCAAGTAAGTTAAAGCCATCACATTTGAGTGCC										
Mus musculus	Riken	ILMN_206177	ILMN_206177	E330018D23RIK	ri|E330018D23|PX00211D10|AK087766|1282					AK087766	E330018D23Rik		ILMN_2578155	001570563	S	946	GTTTTGGGCAGAGCTAGAGATGGTCTGGTACATGCTAGGCCAGTGCAGAC										
Mus musculus	RefSeq	ILMN_209135	ILMN_209135	LGALS3BP	NM_011150.2	NM_011150.2		19039	118130236	NM_011150.2	Lgals3bp	NP_035280.1	ILMN_1258526	000160463	S	1857	GGTCATACGCCCCTTCTACCTCACTAACTCCACTGACATGGTGTAAATGG	11	-	118254327-118254331:118254332-118254376	11qE2	Mus musculus lectin, galactoside-binding, soluble, 3 binding protein (Lgals3bp), mRNA.			Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence TAS]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence ISS]	MAC-2BP; 90K; CyCAP; Ppicap	MAC-2BP; 90K; CyCAP; Ppicap
Mus musculus	RefSeq	ILMN_187100	ILMN_232492	MYH10	NM_175260.2	NM_175260.2		77579	105554494	NM_175260.2	Myh10	NP_780469.1	ILMN_1226114	007040608	S	6970	CACAGTAACTTCCAGGTGGTCTCCTGAGTGTCTGGCTTGATAATGCCCTC	11	+	68629313-68629362	11qB3	Mus musculus myosin, heavy polypeptide 10, non-muscle (Myh10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IMP]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISO]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence ISO]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence IMP]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The directed movement of the nucleus [goid 7097] [evidence IMP]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IMP]; The formation of a cell surface protrusion, such as a lamellipodium or filopodium, at the leading edge of a migrating cell [goid 6930] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the lateral ventricles over time, from the formation to the mature structure. The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle [goid 21670] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The process whose specific outcome is the progression of the lateral ventricles over time, from the formation to the mature structure. The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle [goid 21670] [evidence IMP]; The process whose specific outcome is the progression of the fourth ventricle over time, from its formation to the mature structure. The fourth ventricle is an irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space [goid 21592] [evidence IMP]; The process whose specific outcome is the progression of the third ventricle over time, from its formation to the mature structure. The third ventricle is the narrow cleft inferior to the corpus callosum, within the diencephalon, between the paired thalami. Its floor is formed by the hypothalamus, its anterior wall by the lamina terminalis, and its roof by ependyma, and it communicates with the fourth ventricle by the cerebral aqueduct, and with the lateral ventricles by the interventricular foramina [goid 21678] [evidence IMP]; The process whose specific outcome is the progression of a ventricular cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55015] [evidence IMP]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IMP]; The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21680] [evidence IMP]; The process whose specific outcome is the progression of the fourth ventricle over time, from its formation to the mature structure. The fourth ventricle is an irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space [goid 21592] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of an actin filament to accelerate release of ADP and phosphate [goid 30898] [evidence ISO]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence ISO]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ADP, adenosine 5'-diphosphate [goid 43531] [evidence ISO]	Myhn-2; 5730504C04Rik; SMemb; NMHC-B; 9330167F11Rik; MGC115764; mKIAA3005; NMHC II-B; Myhn2	Myhn-2; 5730504C04Rik; SMemb; NMHC-B; 9330167F11Rik; MGC115764; mKIAA3005; NMHC II-B; Myhn2
Mus musculus	Riken	ILMN_202978	ILMN_202978	5830434K11RIK	ri|5830434K11|PX00039A24|AK030864|3337					AK030864	5830434K11Rik		ILMN_2553783	005090162	S	2956	AAGTTAATGGGTGGGGGGAGTAAGTGGGCGCCGTTGCCTGGATTTGTACA										
Mus musculus	MEEBO	ILMN_220118	ILMN_220118	1600010O03RIK	scl20647.1.1217_2	NM_198016.1			37574107	NM_198016.1	1600010O03Rik		ILMN_2717837	000620400	S	252	CTGTTTGATTTATAAAAGATGTCTTTTGTGTGTGAACTTGTGTTGTACTC										
Mus musculus	RefSeq	ILMN_197061	ILMN_257370	EG668081	XM_994212.1	XM_994212.1		668081	94393126	XM_994212.1	EG668081	XP_999306.1	ILMN_1255143	004830093	S	360	CCCTTCAGGAGAAGAAAGATCTGGTGGCCTATTCTGCATGCTGCTTCAGG	12	+	106649921-106649970	12qE	PREDICTED: Mus musculus predicted gene, EG668081 (EG668081), mRNA.					
Mus musculus	RefSeq	ILMN_220202	ILMN_220202	VASH2	NM_144879.1	NM_144879.1		226841	21450246	NM_144879.1	Vash2	NP_659128.1	ILMN_2719036	006980475	S	3622	GGCTCGACGACTCTCTCTCATCATGTGTCCACACAGCATGGAACTGTAAT	1	-	192771653-192771702	1qH6	Mus musculus vasohibin 2 (Vash2), mRNA.				MGC38004; B130052G07Rik	MGC38004; B130052G07Rik
Mus musculus	RefSeq	ILMN_198824	ILMN_198824	LOC232887	XM_124858.2	XM_124858.2			38088382	XM_124858.2	LOC232887		ILMN_2533054	006860682	S	1104	GCTATGGGATGCAAGAAGCTGTAAGGCTCCTCTCTATGATCTAGCTGCTC										
Mus musculus	MEEBO	ILMN_188924	ILMN_188924	1700012H17RIK	scl25705.7_6				27734129	NM_173426	1700012H17Rik		ILMN_2766755	000160327	S	1761	GGGTGGGTCTGTCTGTGCATACACAGTTGTGAAGGTTGTGAGGTCTCCTT										
Mus musculus	RefSeq	ILMN_200848	ILMN_200848	LOC381875	XM_355887.1	XM_355887.1			38086547	XM_355887.1	LOC381875		ILMN_1243535	005260673	S	345	TCCTAACCCCATAGATCCTCTCAATGAGTACATCCAGAAGTACGCAACGG										
Mus musculus	Riken	ILMN_202717	ILMN_202717	1700007N01RIK	ri|1700007N01|ZX00074C07|AK018831|691					AK018831	1700007N01Rik		ILMN_2551732	006060301	S	511	GGGCTCAGTGTAAACGTCCTCTGTGGCTTTGCAAGCTGGACATCATCACG										
Mus musculus	RefSeq	ILMN_230846	ILMN_230846	GGTLA1	NM_011820.2	NM_011820.2		23887	31542890	NM_011820.2	Ggtla1	NP_035950.2	ILMN_2994788	006580634	S	3784	CTAACACAGTTTCCCACTGTTCCTGCTTTTCTGTGCCTAGCCCCAGGATC	10	+	75060331-75060380	10qC1	Mus musculus gamma-glutamyltransferase-like activity 1 (Ggtla1), mRNA.				GGT-REL; AI551243; GGL; MGC132842	GGT-REL; AI551243; GGL; MGC132842
Mus musculus	RefSeq	ILMN_222979	ILMN_222979	ENO3	NM_007933.2	NM_007933.2		13808	31982848	NM_007933.2	Eno3	NP_031959.1	ILMN_2757569	003830601	S	1081	AAGGCCTGCAATTGCCTGCTCCTGAAGGTCAACCAGATCGGCTCCGTGAC	11	+	70475028-70475077	11qB3	Mus musculus enolase 3, beta muscle (Eno3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A multimeric enzyme complex, usually a dimer or an octamer, that catalyzes the conversion of 2-phospho-D-glycerate to phosphoenolpyruvate and water [goid 15] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 2-phospho-D-glycerate = phosphoenolpyruvate + H2O [goid 4634] [evidence IEA]	Eno-3	Eno-3
Mus musculus	RefSeq	ILMN_196702	ILMN_196702	LOC245310	XM_159712.2	XM_159712.2			38096528	XM_159712.2	LOC245310		ILMN_1221993	006620128	S	315	GTTATTACCCCATGGGAAACAAGGGAAGCATTTGGGTCCTTCCTTAAGTG										
Mus musculus	RefSeq	ILMN_208852	ILMN_208852	SLC9A8	NM_148929.2	NM_148929.2		77031	46909603	NM_148929.2	Slc9a8	NP_683731.1	ILMN_2626535	001780678	S	245	CACCTGCTGATTCGGTACCGCCTGCACTTTCTGCCTGAGAGCGTGGCTGT	2	+	167260302-167260351	2qH3	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 8 (Slc9a8), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]; Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion [goid 51453] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(in) + H+(out) = K+(out) + H+(in) [goid 15386] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IDA]	1200006P13Rik; 6430709P13Rik; NHE8; AI182282	1200006P13Rik; 6430709P13Rik; NHE8; AI182282
Mus musculus	MEEBO	ILMN_190549	ILMN_190549	BCL11A	scl0001352.1_150				30410853	BC051418	Bcl11a		ILMN_1257463	001570022	S	1	GGGTTCCATTGTCTTGGTGGTGTTACAAGACCTGTTATCCATTTAAAAAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]		
Mus musculus	MEEBO	ILMN_188361	ILMN_188361	LEF1	scl016842.15_30				27735018	NM_010703	Lef1		ILMN_1231087	006330411	S	1	TTGCTAGCTCTGAGCTTTTAAGTGAAATTCATAGGTCTGAAAGAGTTTGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]	The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 48341] [evidence IGI]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IGI]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IGI]; The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus [goid 21542] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]	The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IGI]		
Mus musculus	RefSeq	ILMN_241784	ILMN_241784	CYB561D2	NM_019720.2	NM_019720.2		56368	31560397	NM_019720.2	Cyb561d2	NP_062694.1	ILMN_2850342	005960017	S	1462	CCATGGTCATTTGTGGTGGCGGGCAGATCTCTGTGAGCTCTAAGCCAACC	9	-	107397382-107397431	9qF1	Mus musculus cytochrome b-561 domain containing 2 (Cyb561d2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Tsp10; AW049681	Tsp10; AW049681
Mus musculus	RefSeq	ILMN_220122	ILMN_220122	MME	NM_008604.2	NM_008604.2		17380	31543254	NM_008604.2	Mme	NP_032630.2	ILMN_2863362	007100259	S	3887	CCAGATCTCCAGCATTATGCACTAGCTCTGCCCCATTTTGTCTTTCAGTC	3	+	63469807-63469856	3qE1	Mus musculus membrane metallo endopeptidase (Mme), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	C85356; NEP; 6030454K05Rik; CD10; CALLA	C85356; NEP; 6030454K05Rik; CD10; CALLA
Mus musculus	RefSeq	ILMN_220122	ILMN_220122	MME	NM_008604.2	NM_008604.2		17380	31543254	NM_008604.2	Mme	NP_032630.2	ILMN_2863366	002650681	S	3769	CAAAAACTACAGTTCAGCGAACTGATATTCTCTGAACACAGCACCCTAGC	3	+	63469689-63469738	3qE1	Mus musculus membrane metallo endopeptidase (Mme), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	C85356; NEP; 6030454K05Rik; CD10; CALLA	C85356; NEP; 6030454K05Rik; CD10; CALLA
Mus musculus	MEEBO	ILMN_208677	ILMN_208677	1700017D01RIK	scl52731.7.1_8				51771436	XM_484775	1700017D01Rik		ILMN_2588483	005390209	S	1031	TCCAAAAGATATAGAAGATGAAAATGATGTGACTAACTGAAGAACCCTGC										
Mus musculus	RefSeq	ILMN_218440	ILMN_218440	HLCS	NM_139145.4	NM_139145.4		110948	146149144	NM_139145.4	Hlcs	NP_631884.1	ILMN_2695867	006650327	S	4393	AGCACTGAAGCTGCATTCCCCACTGGCCTGACTTGGCCTCACATGAACCA				16qC4	Mus musculus holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) (Hlcs), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + biotin + apo-(propanoyl-CoA:carbon-dioxide ligase (ADP-forming)) = AMP + diphosphate + (propanoyl-CoA:carbon-dioxide ligase (ADP-forming)) [goid 4080] [evidence IEA]; Catalysis of the reaction: ATP + biotin + apo-(3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)) = AMP + diphosphate + (3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)) [goid 4078] [evidence IEA]; Catalysis of the reaction: ATP + biotin + apo-(methylmalonyl-CoA:pyruvate carboxytransferase) = AMP + diphosphate + (methylmalonyl-CoA:pyruvate carboxytransferase) [goid 4079] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + biotin + apo-(acetyl-CoA:carbon-dioxide ligase (ADP forming)) = AMP + diphosphate + (acetyl-CoA:carbon-dioxide ligase (ADP forming)) [goid 4077] [evidence IEA]	410I21.SP6; D16Jhu34	410I21.SP6; D16Jhu34
Mus musculus	RefSeq	ILMN_210279	ILMN_210279	ELAVL2	NM_207686.1	NM_207686.1		15569	46592825	NM_207686.1	Elavl2	NP_997569.1	ILMN_3121717	001300246	A	3392	AGGTTTCCCTTGTGGGCAAACAGCAGCTACACGCTTCTTTCCTGTGCTAC	4	-	90917704-90917753	4qC5	Mus musculus ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (Elavl2), transcript variant 3, mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hub; mel-N1	Hub; mel-N1
Mus musculus	RefSeq	ILMN_210279	ILMN_210279	ELAVL2	NM_207686.1	NM_207686.1		15569	46592825	NM_207686.1	Elavl2	NP_997569.1	ILMN_2604028	005270768	S	3433	TGTGCTACTGTAGCAAACCACAGCATTGATGAGAAGGCATGCGGACTGTG	4	-	90917663-90917712	4qC5	Mus musculus ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) (Elavl2), transcript variant 3, mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hub; mel-N1	Hub; mel-N1
Mus musculus	MEEBO	ILMN_209085	ILMN_209085	MGC67181	scl00242747.1_237	NM_198619.1			38348487	NM_198619.1	MGC67181		ILMN_2775600	001030433	S	25	AAGAAGGGGAAGTTAGTAGTGGGTGGTCTGAGGGACGCTCAGGCAAGGTC										
Mus musculus	RefSeq	ILMN_221456	ILMN_221456	RND2	NM_009708.1	NM_009708.1		11858	6753115	NM_009708.1	Rnd2	NP_033838.1	ILMN_2735865	003190437	S	223	GCCTACCCGGATTCTGATGCTGTGCTTATCTGCTTTGACATTAGCCGGCC	11	+	101331359-101331408	11qD	Mus musculus Rho family GTPase 2 (Rnd2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rohn; Arhn	Rohn; Arhn
Mus musculus	RefSeq	ILMN_220927	ILMN_220927	CASP3	NM_009810.2	NM_009810.2		12367	118129865	NM_009810.2	Casp3	NP_033940.1	ILMN_2939071	002690307	S	741	CGCGCACAAGCTAGAATTTATGCACATTCTCACTCGCGTTAACAGGAAGG	8	+	47723346-47723395	8qB1.1	Mus musculus caspase 3 (Casp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IGI]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IGI]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA];  [goid 8625] [evidence IMP]; The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of activated T cell proliferation [goid 46007] [evidence IMP]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IGI]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IMP]	A830040C14Rik; Apopain; Yama; Lice; CPP32; Caspase-3	A830040C14Rik; Apopain; Yama; Lice; CPP32; Caspase-3
Mus musculus	RefSeq	ILMN_221587	ILMN_221587	CLK4	NM_007714.4	NM_007714.4		12750	145966867	NM_007714.4	Clk4	NP_031740.1	ILMN_2745251	000150736	S	1443	TTGACCTGGTTCGAAGAATGTTGGAGTATGACCCAGCGAGAAGGATCACC				11qB1.3	Mus musculus CDC like kinase 4 (Clk4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]	AI987988; C85119	AI987988; C85119
Mus musculus	RefSeq	ILMN_221587	ILMN_221587	CLK4	NM_007714.4	NM_007714.4		12750	145966867	NM_007714.4	Clk4	NP_031740.1	ILMN_2737517	007100519	S	517	GGATGATGAGGAGGGTCACCTGATCTGTCAAAGTGGAGACGTTCTAAGAG				11qB1.3	Mus musculus CDC like kinase 4 (Clk4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]	AI987988; C85119	AI987988; C85119
Mus musculus	Riken	ILMN_206692	ILMN_206692	A830030H10RIK	ri|A830030H10|PX00154P16|AK080627|893					AK080627	A830030H10Rik		ILMN_2581989	003060468	S	735	TGGCCCAGAGACACTTGTAGCCTCCTCTTGGTCCTGGAACACTTGCAGCT										
Mus musculus	RefSeq	ILMN_218519	ILMN_218519	ERP29	NM_026129.2	NM_026129.2		67397	31982657	NM_026129.2	Erp29	NP_080405.1	ILMN_1239185	003830689	S	1154	CCCCGCAGGAGTTGGTGCTATAGAGGTAGGGACTACTGCCAGGTCCTTGA	5	-	121894801-121894850	5qF	Mus musculus endoplasmic reticulum protein 29 (Erp29), mRNA.	The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	The regulated release of proteins from a cell or group of cells [goid 9306] [evidence IEA]		PDI-Db; Erp31; Erp28; 2810446M09Rik; AW209030; 1200015M03Rik	PDI-Db; Erp31; Erp28; 2810446M09Rik; AW209030; 1200015M03Rik
Mus musculus	RefSeq	ILMN_191201	ILMN_191201	V1RD10	NM_207543.1	NM_207543.1		404284	46430545	NM_207543.1	V1rd10	NP_997426.1	ILMN_2477036	001850202	S	773	GTCTCTGGTCGAGGCATGTCATAAAAGTTCTAGCTCTAAGCTTTCCCACC	7	-	5405539-5405588	7qA1	Mus musculus vomeronasal 1 receptor, D10 (V1rd10), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218895	ILMN_218895	OLFR1151	NM_146638.1	NM_146638.1		258631	33239163	NM_146638.1	Olfr1151	NP_666849.1	ILMN_2701624	000730647	S	830	TCTATACTCTTGTGATACCAATGTTGAACCCTCTGATTTATAGCTTGAGG	2	+	87698163-87698212	2qD	Mus musculus olfactory receptor 1151 (Olfr1151), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR177-9	MOR177-9
Mus musculus	RefSeq	ILMN_217954	ILMN_217954	RG9MTD1	NM_029092.2	NM_029092.2		52575	141801225	NM_029092.2	Rg9mtd1	NP_083368.1	ILMN_2689740	000010739	S	1498	TCATTTCGAAAAGGCTCCTTAAATGTGCGCACGTGGAAAAGGTGACCTAA	16	-	56034133-56034138:56034139-56034182	16qC1.1	Mus musculus RNA (guanine-9-) methyltransferase domain containing 1 (Rg9mtd1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	D16Ertd454e; Rnmtd1; MGC118020; 1300018J16Rik	D16Ertd454e; Rnmtd1; MGC118020; 1300018J16Rik
Mus musculus	RefSeq	ILMN_220712	ILMN_220712	DAZAP1	NM_133188.1	NM_133188.1		70248	18875323	NM_133188.1	Dazap1	NP_573451.1	ILMN_1248302	007050021	S	1018	TCCCACCACCTCCGTCTCAGGCTGCCCCAGACATGAGCAAACCCCCAACA	10	+	79748091-79748140	10qC1	Mus musculus DAZ associated protein 1 (Dazap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]	2410042M16Rik; mPrrp	2410042M16Rik; mPrrp
Mus musculus	RefSeq	ILMN_220712	ILMN_220712	DAZAP1	NM_133188.1	NM_133188.1		70248	18875323	NM_133188.1	Dazap1	NP_573451.1	ILMN_2860674	004780192	S	1416	TCTCTGACCCATCAGCACAATAAAAACACGTCACTGGTTCAACAACAGGG	10	+	79750601-79750650	10qC1	Mus musculus DAZ associated protein 1 (Dazap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]	2410042M16Rik; mPrrp	2410042M16Rik; mPrrp
Mus musculus	RefSeq	ILMN_219770	ILMN_243087	ZMYM5	NM_144842.3	NM_144842.3		219105	140972029	NM_144842.3	Zmym5	NP_659091.3	ILMN_1231971	003460161	S	2195	GGCAGTGTCTGCAGTACCCAGACATACACTGTGTAAGAGGACCTTACAGG	14	-	57412531-57412580	14qC3	Mus musculus zinc finger, MYM-type 5 (Zmym5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	9830124H08Rik; MGC38922	9830124H08Rik; MGC38922
Mus musculus	RefSeq	ILMN_199961	ILMN_199961	LOC384109	XM_357432.1	XM_357432.1			38079230	XM_357432.1	LOC384109		ILMN_2537099	004210593	S	742	ATCCGAGTACAGCCGGACGAGGGTGTCACTCTGCGGTTCGGGTCGAAGGA										
Mus musculus	RefSeq	ILMN_189370	ILMN_189370	CD40LG	NM_011616.2	NM_011616.2		21947	15011845	NM_011616.2	Cd40lg	NP_035746.2	ILMN_1257241	001260465	S	896	CCCTAGGATCCTCCTCATGGAGAACTATTTATTATGTACCCCCAAGGCAC	X	+	54476865-54476914	XqA5	Mus musculus CD40 ligand (Cd40lg), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence IGI]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IGI]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	TRAP; IMD3; IGM; HIGM1; Tnfsf5; Ly-62; CD154; Cd40l; gp39; Ly62; T-BAM	TRAP; IMD3; IGM; HIGM1; Tnfsf5; Ly-62; CD154; Cd40l; gp39; Ly62; T-BAM
Mus musculus	RefSeq	ILMN_211789	ILMN_211789	DGAT2	NM_026384.3	NM_026384.3		67800	118129808	NM_026384.3	Dgat2	NP_080660.1	ILMN_1219915	000650711	S	1899	ACACGGCTGTCCCACAGGTGCCGTCTTGGGTTATCTCGCTGCTGTTGGCT	7	-	106302475-106302524	7qE2	Mus musculus diacylglycerol O-acyltransferase 2 (Dgat2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of triacylglycerol, any triester of glycerol [goid 19432] [evidence IDA]; The chemical reactions and pathways resulting in the formation of triacylglycerol, any triester of glycerol [goid 19432] [evidence IMP]; The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol [goid 3846] [evidence IDA]; Catalysis of the reaction: acyl-CoA + 1,2-diacylglycerol = CoA + triacylglycerol [goid 4144] [evidence IDA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DGAT-2; 0610010B06Rik	DGAT-2; 0610010B06Rik
Mus musculus	RefSeq	ILMN_201520	ILMN_201520	LCE1H	NM_026335.2	NM_026335.2		67718	142367779	NM_026335.2	Lce1h	NP_080611.1	ILMN_1243087	000070437	S	642	TTGTCCTCATGAAATGACAATGACCATTTTACCCTTTGTTATAAATTAAA	3	-	92567151-92567200	3qF1	Mus musculus late cornified envelope 1H (Lce1h), mRNA.				2310066F03Rik; Sprrl9; AI426284	2310066F03Rik; Sprrl9; AI426284
Mus musculus	RefSeq	ILMN_239268	ILMN_239268	6030405A18RIK	NM_177854.2	NM_177854.2		329641	31342840	NM_177854.2	6030405A18Rik	NP_808522.1	ILMN_2958067	002750242	S	2864	ACCGAAGTCAAACTCACTTGCCTCTCTGCAGGTGCGCTGCCTAACTAGCC	3	-	54985169-54985218	3qC	Mus musculus RIKEN cDNA 6030405A18 gene (6030405A18Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_204451	ILMN_204451	A830084P16RIK	ri|A830084P16|PX00156E22|AK044056|4028					AK044056	A830084P16Rik		ILMN_2565082	002070528	S	3366	GGCTGCTGAGGGAGGACTGCACAAGTTGAGAGCAGACTGGGGATATGTAG										
Mus musculus	RefSeq	ILMN_222002	ILMN_222002	9830107B12RIK	NM_177824.3	NM_177824.3		328829	118130515	NM_177824.3	9830107B12Rik	NP_808492.1	ILMN_1239752	002680551	S	3460	GATCACCTCAGTATGACTATGTGACTTTTCCTGCCAAAAGAACCAAACTG	17	-	48262645-48262694	17qC	Mus musculus RIKEN cDNA 9830107B12 gene (9830107B12Rik), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199311	ILMN_199311	LOC245147	XM_142623.3	XM_142623.3			38094078	XM_142623.3	LOC245147		ILMN_1212668	003190168	S	1086	CCTCCCAACCACGACTGAGGAACCTAAAACCCAGACAAGCAGCCAGACAC										
Mus musculus	RefSeq	ILMN_240637	ILMN_240637	LIPE	NM_001039507.1	NM_001039507.1		16890	87239971	NM_001039507.1	Lipe	NP_001034596.1	ILMN_3111326	003290324	A	2478	AACTTGAGACAGTAAGTGGGGCGGGACAGGGGCCAAAAGCTGAACCTGGG	7	-	26164797-26164846	7qA3	Mus musculus lipase, hormone sensitive (Lipe), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of triacylglycerol, any triester of glycerol [goid 19433] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 46340] [evidence IMP];  [goid 6361] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the reactions: diacylglycerol + H2O = monoacylglycerol + a carboxylate, triacylglycerol + H2O = diacylglycerol + a carboxylate, and monoacylglycerol + H2O = glycerol + a carboxylate [goid 33878] [evidence IEA]; Interacting selectively with an unprocessed ribosomal RNA transcript [goid 42134] [evidence ISS]; Any activity that brings about termination of transcription by RNA polymerase I [goid 3716] [evidence ISS]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	HSL	HSL
Mus musculus	RefSeq	ILMN_218024	ILMN_218024	OLFR1403	NM_146651.1	NM_146651.1		258645	22203782	NM_146651.1	Olfr1403	NP_666862.1	ILMN_2690584	002260594	S	589	GTTAACTTTATCATCAGCTCACTGGTTATTGTGGTACCCATGGGCTTGGT	1	+	175200896-175200945	1qH3	Mus musculus olfactory receptor 1403 (Olfr1403), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-8	MOR267-8
Mus musculus	RefSeq	ILMN_257096	ILMN_257096	EG625424	NM_001039228.1	NM_001039228.1		625424	85986622	NM_001039228.1	EG625424	NP_001034317.1	ILMN_2910876	002360072	S	1664	TTCTTAGAGGGGCAGAGGGGTCCTGGGCTGTTTCTCAGGCTTGGCTCCCA	5	-	112594623-112594672	5qF	Mus musculus predicted gene, EG625424 (EG625424), mRNA.					
Mus musculus	Riken	ILMN_203306	ILMN_203306	4932442C03RIK	ri|4932442C03|PX00019B03|AK030106|3976					AK030106	4932442C03Rik		ILMN_2556299	004610296	S	683	CGGGCAGCTAGGAGAAGACAAGCACATTTGGCACGGAGAGGAACCAGAAC										
Mus musculus	MEEBO	ILMN_187919	ILMN_187919	MUG-PS1	scl0017835.1_157						Mug-ps1		ILMN_1237259	001570397	S	13	GCTATAAAAGAAGACAACTCCATCCACTGGGAAAGGCCTCAGAAACCCAG										
Mus musculus	RefSeq	ILMN_216010	ILMN_216010	TMEM82	NM_145987.2	NM_145987.2		213989	77020278	NM_145987.2	Tmem82	NP_666099.2	ILMN_2666312	000150543	S	1931	GAGATGGACAGCGTCAGCAGACCCACTTTTCTTGGCTGGGCAAGAGGACA	4	-	141170233-141170282	4qE1	Mus musculus transmembrane protein 82 (Tmem82), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-291H3.2; MGC37938	RP23-291H3.2; MGC37938
Mus musculus	RefSeq	ILMN_198571	ILMN_245990	FFAR3	NM_001033316.2	NM_001033316.2		233080	142345193	NM_001033316.2	Ffar3	NP_001028488.1	ILMN_1236703	002600274	S	885	CTTCCTCCAAGTTCCAAGCCGACTTTCATCAACTCCTGGGGAGGCTGCTC	7	-	31640039-31640088	7qB1	Mus musculus free fatty acid receptor 3 (Ffar3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gm478; Gpr41	Gm478; Gpr41
Mus musculus	RefSeq	ILMN_185016	ILMN_185016	TRIM31	NM_146077.2	NM_146077.2		224762	118130248	NM_146077.2	Trim31	NP_666189.1	ILMN_1245496	006290086	S	1914	CCCCCCAAAGACTATACACGAGGTTTTTCAGTGCTGCACTTGGTAGCAGG	17	+	37038808-37038824:37042255-37042277:37042359-37042368	17qB1	Mus musculus tripartite motif-containing 31 (Trim31), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	HCG1; MGC37625; HCGI; RNF; BC026666	HCG1; MGC37625; HCGI; RNF; BC026666
Mus musculus	Riken	ILMN_205758	ILMN_205758	ADAM12	ri|A630007F11|PX00144O04|AK041404|1042					AK041404	Adam12		ILMN_1236813	001740470	S	814	GAGGGGCTGCTGAGACTGTAGCTTAGTGATGGAACATTTGCCTAGCCTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196354	ILMN_229149	4932425I24RIK	XM_924666.2	XM_924666.2		320214	94400377	XM_924666.2	4932425I24Rik	XP_929759.1	ILMN_1214123	007040743	S	2188	TATGAGTGCTGAGCCTGGTAGTTGCCACACCCCAGTGGAAGGCCACATAC				16qB3	PREDICTED: Mus musculus RIKEN cDNA 4932425I24 gene, transcript variant 4 (4932425I24Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]				
Mus musculus	Riken	ILMN_204589	ILMN_204589	SOX6	ri|C130037G05|PX00169E13|AK048143|3804					AK048143	Sox6		ILMN_2566142	005270750	S	3698	TGGAGCTGCAGGTCAAATGTGGACACTATGCACTTCAAATCCCAAAGCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual [goid 35051] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]; Any mechanism, at the level of transcription or post-transcription, causing long-term gene inactivation [goid 16458] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	Riken	ILMN_202434	ILMN_202434	4632407J06RIK	ri|4632407J06|PX00012G14|AK014555|3952					AK014555	4632407J06Rik		ILMN_2549580	001690612	S	3097	GCCAGACTTGGGAGCCAAATGCCTTTACTTGCTGAGCCAATAAACCTGGC										
Mus musculus	RefSeq	ILMN_191936	ILMN_252976	CTTNBP2NL	NM_030249.3	NM_030249.3		80281	142364888	NM_030249.3	Cttnbp2nl	NP_084525.1	ILMN_1216335	003710598	S	2890	AGTCATTCTCCGTTTCCTGCATCACTTCTTGAGTAGTGAAGTCACGTCTC	3	-	104806839-104806888	3qF2.2	Mus musculus CTTNBP2 N-terminal like (Cttnbp2nl), mRNA.				BC003236; AA552995; MGC7720; AU018624; mKIAA1433; AA589392	BC003236; AA552995; MGC7720; AU018624; mKIAA1433; AA589392
Mus musculus	RefSeq	ILMN_214001	ILMN_214001	SIRT1	NM_019812.1	NM_019812.1		93759	9790228	NM_019812.1	Sirt1	NP_062786.1	ILMN_2643159	004860762	S	3211	CTGTTGCCTGTTGAGGATTTGGTGTAATGTATCCCAAGGTGTTAGCCTTG	10	-	62782384-62782433	10qB4	Mus musculus sirtuin 1 (silent mating type information regulation 2, homolog) 1 (S. cerevisiae) (Sirt1), mRNA.	Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IDA]; The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IDA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence ISA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Sir2; Sir2a; AA673258; Sir2alpha; SIR2L1	Sir2; Sir2a; AA673258; Sir2alpha; SIR2L1
Mus musculus	MEEBO	ILMN_194626	ILMN_194626	2610304F09RIK	scl52155.17_30				27881434	NM_172965	2610304F09Rik		ILMN_2508092	004280605	S	20	AATGAGTCTGATTGGAGCAGTTTACTGTCTTATGTCAAAGATCAGAGTGC										
Mus musculus	MEEBO	ILMN_185900	ILMN_185900	1110017F19RIK	scl40717.3.1_3						1110017F19Rik		ILMN_1258737	005360358	S	13	GGCTGTGTTTGAAGAGGAGTGATCCGTCTCCTCCGGGTCCTAGAAGGCAG										
Mus musculus	Riken	ILMN_205008	ILMN_205008	9630029G12RIK	ri|9630029G12|PX00116I17|AK036041|2597					AK036041	9630029G12Rik		ILMN_2569290	002490338	S	2391	CAGAGCCCATGTGGTGGAAGGAGAAAGTGAATTGGAGATTGTCCTGTGAC										
Mus musculus	RefSeq	ILMN_216968	ILMN_225752	SEC24B	NM_207209.2	NM_207209.2		99683	118130985	NM_207209.2	Sec24b	NP_997092.1	ILMN_1219269	002690408	S	1285	ATCAAGCTAGCTCCACAGCGACTCCCTTGTCATCAGCTTCCGATGATGAG	3	-	129723483-129723532	3qG3	Mus musculus Sec24 related gene family, member B (S. cerevisiae) (Sec24b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		SEC24; AI605202	SEC24; AI605202
Mus musculus	RefSeq	ILMN_216968	ILMN_225752	SEC24B	NM_207209.2	NM_207209.2		99683	118130985	NM_207209.2	Sec24b	NP_997092.1	ILMN_1228710	006380743	S	4327	AGATGCCGAAGGGCAGCGGCACTGTGGTACTCGCTTGTATGAATTACTTC	3	-	129686428-129686477	3qG3	Mus musculus Sec24 related gene family, member B (S. cerevisiae) (Sec24b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		SEC24; AI605202	SEC24; AI605202
Mus musculus	MEEBO	ILMN_194603	ILMN_194603	SH3BP5	scl45757.12.1_4				6755497	NM_011894	Sh3bp5		ILMN_2507901	002850377	S	4	TAATTCTCAAGCAAAAATCTATCAGTGAAGAAAAACAAATGCTGTATTTT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence ISO]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence TAS]		
Mus musculus	MEEBO	ILMN_208648	ILMN_208648	PPP2R4	scl0003309.1_3				31981676	NM_138748	Ppp2r4		ILMN_2769131	004670528	S	301	CCCTCCAACTACTCAGAACTTTATCATTCCAAAAAAGGAGATCCACACAG								Increases the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19211] [evidence IEA]		
Mus musculus	MEEBO	ILMN_208648	ILMN_208648	PPP2R4	scl0003309.1_3				31981676	NM_138748	Ppp2r4		ILMN_2755399	001510088	S	2365	CACAACTCAGGGGCTTGGCCAGGAATTAACTATGGTCTGGGCAGAGCGGG								Increases the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19211] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192774	ILMN_192774	CALCA	scl30784.6.1_78				33468844	NM_007587	Calca		ILMN_2744927	001470465	S	699	CAGGAAGATGGCAGAGAGCAAGGGCAGTCATCTGGCTTCCTAGTAGAGCT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of a neurophysiological process [goid 31645] [evidence IMP]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; The regulation of blood pressure mediated by detection of stimuli and a neurological response [goid 1976] [evidence ISA]; An increase in the internal diameter of an artery, triggered by vasomotor suppression, during the chemoreceptor response to decreased blood pressure [goid 1984] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IDA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence ISA]; Behavior associated with the intake of food [goid 7631] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle contraction [goid 45986] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence ISA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence ISA]	Interacting selectively with a calcitonin receptor [goid 31716] [evidence IDA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]		
Mus musculus	MEEBO	ILMN_192774	ILMN_192774	CALCA	scl30784.6.1_78				33468844	NM_007587	Calca		ILMN_2491213	006760270	S	9	CAGGAGCTAAAGCTAAGTGCAGAATAAGTTGCCTATTGTGCATCGTGTTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of a neurophysiological process [goid 31645] [evidence IMP]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; The regulation of blood pressure mediated by detection of stimuli and a neurological response [goid 1976] [evidence ISA]; An increase in the internal diameter of an artery, triggered by vasomotor suppression, during the chemoreceptor response to decreased blood pressure [goid 1984] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IDA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence ISA]; Behavior associated with the intake of food [goid 7631] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle contraction [goid 45986] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence ISA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence ISA]	Interacting selectively with a calcitonin receptor [goid 31716] [evidence IDA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]		
Mus musculus	Riken	ILMN_204958	ILMN_204958	D430002C13RIK	ri|D430002C13|PX00193D23|AK052398|2021					AK052398	D430002C13Rik		ILMN_1215190	006480228	S	1746	TCCTGGCTCTTGAGGAGGAGCGGCCAGTGCTCGTAACCACTGAATCGTCT										
Mus musculus	RefSeq	ILMN_252613	ILMN_252613	MED22	NM_001033908.1	NM_001033908.1		20933	76781478	NM_001033908.1	Med22	NP_001029080.1	ILMN_3100456	006510521	A	929	TTAGCTCCCTTGGGGACTTTGGGATCAGGAGCCACTGTAGCCTCAGGAAC	2	-	26761175-26761224	2qA3	Mus musculus mediator complex subunit 22 (Med22), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AW212655; AW558812; Surf5; Surf-5	AW212655; AW558812; Surf5; Surf-5
Mus musculus	RefSeq	ILMN_214340	ILMN_312276	1010001N08RIK	XM_001475178.1	XM_001475178.1		68434	149269593	XM_001475178.1	1010001N08Rik	XP_001475228.1	ILMN_1216463	001570465	S	1815	TTCACGAAGCTTCTACCTGCTCGAACATTGATTCAAAAGTGGGGCAAGGG				18qA1	PREDICTED: Mus musculus RIKEN cDNA 1010001N08 gene (1010001N08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210745	ILMN_210745	HADHB	NM_145558.1	NM_145558.1		231086	21704099	NM_145558.1	Hadhb	NP_663533.1	ILMN_1230454	005290500	S	1756	GTCTTTGTAACATTTGCAGATACTCCTTATTCCTGTCTGTGTCATAGAGA	5	+	30510930-30510979	5qB1	Mus musculus hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit (Hadhb), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence TAS]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA [goid 3988] [evidence IDA]	4930479F15Rik; Mtpb	4930479F15Rik; Mtpb
Mus musculus	RefSeq	ILMN_200201	ILMN_200201	LOC385929	XM_359002.1	XM_359002.1			38080890	XM_359002.1	LOC385929		ILMN_2537932	007550424	S	38	ATCTTCTGGCCGGGAAGGTGCCTGGATGTTTGGAGTCCGAAAAGGGGGAT										
Mus musculus	RefSeq	ILMN_200322	ILMN_200322	LOC386233	XM_359128.1	XM_359128.1			38081312	XM_359128.1	LOC386233		ILMN_2538355	004220025	S	252	TCTGACTGGTGTGAGATGGAATCTCAGGGTTGTTTTGATTTGCATTTCCC										
Mus musculus	RefSeq	ILMN_200056	ILMN_200056	LOC383185	XM_356910.1	XM_356910.1			38080080	XM_356910.1	LOC383185		ILMN_2537449	004390524	S	662	CTCAGGTTACACTTAGAGCAGTTTTACGGGAGCCCTATACAGTCCGTGTG										
Mus musculus	RefSeq	ILMN_259614	ILMN_259614	AHCY	NM_016661.2	NM_016661.2		269378	61098091	NM_016661.2	Ahcy	NP_057870.2	ILMN_2852533	006110551	S	2295	TCTACAAGTGCAAACGGTCTTACCCACTGAGCCATCTCTTCACGGATCGC	2	-	154885173-154885222	2qH1	Mus musculus S-adenosylhomocysteine hydrolase (Ahcy), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of S-adenosylhomocysteine, forming homocysteine and then methionine [goid 19510] [evidence IDA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine [goid 4013] [evidence IDA]	AL024110; MGC118063; SAHH; CuBP; AA987153	AL024110; MGC118063; SAHH; CuBP; AA987153
Mus musculus	RefSeq	ILMN_198786	ILMN_198786	LOC245066	XM_142398.1	XM_142398.1			20957846	XM_142398.1	LOC245066		ILMN_2532923	005670682	S	191	AGAAGAAAGCCTGGGATATGACCTTCAAAATCTTCCAGAAGATGAATAGG										
Mus musculus	RefSeq	ILMN_219551	ILMN_219551	MTA3	NM_054082.1	NM_054082.1		116871	16905114	NM_054082.1	Mta3	NP_473423.1	ILMN_2847038	000630678	S	1649	TTAGAGATCCATCCCGCAAAGAAACCTAATGTAATTCGGTCTCCACCAAG	17	+	84199473-84199476:84203791-84203836	17qE4	Mus musculus metastasis associated 3 (Mta3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110002J22Rik; mKIAA1266	1110002J22Rik; mKIAA1266
Mus musculus	RefSeq	ILMN_219551	ILMN_219551	MTA3	NM_054082.1	NM_054082.1		116871	16905114	NM_054082.1	Mta3	NP_473423.1	ILMN_1259783	001820725	S	1496	ACCCTGCGGCTGCGGCAGGCAGCGAGACGGCCGTTTGTTGCTATTAATTA	17	+	84192035-84192084	17qE4	Mus musculus metastasis associated 3 (Mta3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110002J22Rik; mKIAA1266	1110002J22Rik; mKIAA1266
Mus musculus	RefSeq	ILMN_216849	ILMN_326706	LOC100047905	XM_001479341.1	XM_001479341.1		100047905	149270130	XM_001479341.1	LOC100047905	XP_001479391.1	ILMN_2676074	001300369	S	1087	TGTTAGCTTTGAAACAAACCTAAGTCAGACCTCCTATGACGACCTGATCA					PREDICTED: Mus musculus similar to S-adenosylmethionine decarboxylase (LOC100047905), mRNA.					
Mus musculus	Riken	ILMN_207067	ILMN_207067	6430504C03RIK	ri|6430504C03|PX00648G07|AK078204|994					AK078204	6430504C03Rik		ILMN_1238534	002710468	S	797	TGCATGTGTCACCCAACTACCCAGGACAGGGATGAGGATGGGGCACGAGT										
Mus musculus	MEEBO	ILMN_190303	ILMN_190303	1700025K24RIK	scl49790.3.1_12						1700025K24Rik		ILMN_1215710	006100114	S	19	CTGGTACTCAGAGAAATCCTAATTCATAGACTGCCTTCTCAGGAGGACCC										
Mus musculus	RefSeq	ILMN_216860	ILMN_216860	CAMKK1	NM_018883.2	NM_018883.2		55984	133922602	NM_018883.2	Camkk1	NP_061371.2	ILMN_1242310	007610424	S	3027	TCTACATCAACTTATGCCTAGGAGCAGCAGGTAGCCCACTGTCAAAGGGC	11	+	72851936-72851985	11qB4	Mus musculus calcium/calmodulin-dependent protein kinase kinase 1, alpha (Camkk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence ISS]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	AI846603; Camkk; CaMKKalpha	AI846603; Camkk; CaMKKalpha
Mus musculus	RefSeq	ILMN_210256	ILMN_210256	OLFR435	NM_146653.1	NM_146653.1		258647	33238911	NM_146653.1	Olfr435	NP_666864.1	ILMN_2907173	006620243	S	654	ACGCATCCTGGTGACTATCCTGAGGATCCAGTCAGGGGAGGGACGCAGAA	6	+	43152298-43152347	6qB2.1	Mus musculus olfactory receptor 435 (Olfr435), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR261-5	MOR261-5
Mus musculus	RefSeq	ILMN_210256	ILMN_210256	OLFR435	NM_146653.1	NM_146653.1		258647	33238911	NM_146653.1	Olfr435	NP_666864.1	ILMN_1250611	001470551	S	173	TGTATTTCTTCCTCTCCAATTTGGCCACTGTTGACATTGCCTATGCCTGC	6	+	43151817-43151866	6qB2.1	Mus musculus olfactory receptor 435 (Olfr435), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR261-5	MOR261-5
Mus musculus	RefSeq	ILMN_216646	ILMN_216646	EIF4EBP2	NM_010124.2	NM_010124.2		13688	118129916	NM_010124.2	Eif4ebp2	NP_034254.1	ILMN_2673566	004390047	S	1467	GAGAGCAGCACAGGCTAAGACAGTGTATTCCTCCCAGGTCTCTCGCCCTT	10	-	60895514-60895563	10qB4	Mus musculus eukaryotic translation initiation factor 4E binding protein 2 (Eif4ebp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of translational initiation [goid 45947] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; A series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response [goid 19933] [evidence IDA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence TAS]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation [goid 8190] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC141219; BC010348; 2810011I19Rik; 4E-BP2; PHAS-II	MGC141219; BC010348; 2810011I19Rik; 4E-BP2; PHAS-II
Mus musculus	RefSeq	ILMN_200725	ILMN_200725	LOC386427	XM_359226.1	XM_359226.1			38085555	XM_359226.1	LOC386427		ILMN_2539779	005290196	S	153	AGGCCTGCAAAAAGTCCAGTGGTCCCTGAAACCAGGCAAGCCTCAGCAGG										
Mus musculus	RefSeq	ILMN_212836	ILMN_212836	PRKAR1A	NM_021880.2	NM_021880.2		19084	142364451	NM_021880.2	Prkar1a	NP_068680.1	ILMN_1235481	002320136	S	3120	CTGTGTCTTTGTGGACTCTTGGCACCATTGTCTCTGGATGGGTGGGCGAA	11	+	109530759-109530808	11qE1	Mus musculus protein kinase, cAMP dependent regulatory, type I, alpha (Prkar1a), mRNA.	The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]	Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IDA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IMP]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IGI]	1300018C22Rik; RIalpha; Tse-1; Tse1	1300018C22Rik; RIalpha; Tse-1; Tse1
Mus musculus	Riken	ILMN_204509	ILMN_204509	LAMA2	ri|B230342M05|PX00160G01|AK046114|323					AK046114	Lama2		ILMN_2565522	004810349	S	151	CCCAAGCGCATCAACAGAGAGGTGATAGGTGCTTGGCAACAACTCAGAGA						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]; Any process that activates, maintains or increases the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 32224] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	Riken	ILMN_207382	ILMN_207382	C530020B06RIK	ri|C530020B06|PX00669C11|AK082950|1930					AK082950	C530020B06Rik		ILMN_1243159	003940753	S	1480	GGAAATGGAGCAGAAGTGTGAGTGGCCAGAAAATGCTAATGTGGGCTCCC										
Mus musculus	RefSeq	ILMN_220074	ILMN_220074	CHD1	NM_007690.1	NM_007690.1		12648	6680927	NM_007690.1	Chd1	NP_031716.1	ILMN_2958382	000160356	S	4814	CAGACACTTATCTCAGTACCATGATCATCACAAGGACCGCCATCAGGGAG	17	+	15473320-15473369	17qA2	Mus musculus chromodomain helicase DNA binding protein 1 (Chd1), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The formation or destruction of chromatin structures [goid 6333] [evidence NAS]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence NAS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI851787; AW555109; MGC141554; 4930525N21Rik	AI851787; AW555109; MGC141554; 4930525N21Rik
Mus musculus	RefSeq	ILMN_197472	ILMN_321143	GM77	XM_001479332.1	XM_001479332.1		219038	149265657	XM_001479332.1	Gm77	XP_001479382.1	ILMN_1232769	006180541	S	61	AGCAGCAAGGAAATTACCAACAAGAACTTCTCCAAACTCTGTAAAGACTG	14	+	52538523-52538572	14qC2	PREDICTED: Mus musculus gene model 77, (NCBI) (Gm77), mRNA.					
Mus musculus	MEEBO	ILMN_220280	ILMN_220280	C920008G01RIK	scl00320734.1_122	NM_177247.2			31343162	NM_177247.2	C920008G01Rik		ILMN_1230091	000150142	S	1182	CAGAACAGCATGAATAGGACATACAGAATATTGTACTCTTAGGAATCTGC										
Mus musculus	MEEBO	ILMN_223028	ILMN_223028	ATE1	scl000201.1_50				29747927	BC050948	Ate1		ILMN_2758295	003780195	S	944	ATATACCAAGTATCAAGTGGCTATACACCAGGAAGCACCTGAAATATGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The posttranslational conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway [goid 16598] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Catalysis of the reaction: L-arginyl-tRNA + protein = tRNA + L-arginyl-protein [goid 4057] [evidence IDA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210375	ILMN_210375	OLFR380	NM_147025.1	NM_147025.1		259027	22128894	NM_147025.1	Olfr380	NP_667236.1	ILMN_2604984	004210095	S	416	GCTCTGTGTGTGTCTGGTGCTGCTGTCCTGGGTGATTAGTATACTGAATT	11	-	73267247-73267296	11qB4	Mus musculus olfactory receptor 380 (Olfr380), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR135-1	MOR135-1
Mus musculus	RefSeq	ILMN_210375	ILMN_210375	OLFR380	NM_147025.1	NM_147025.1		259027	22128894	NM_147025.1	Olfr380	NP_667236.1	ILMN_2983350	004070204	S	487	TTGGCTAGGTTGTCATTCTGTGAGGACAACATGATCCGCCACTTTTTCTG	11	-	73267176-73267225	11qB4	Mus musculus olfactory receptor 380 (Olfr380), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR135-1	MOR135-1
Mus musculus	RefSeq	ILMN_194824	ILMN_262076	DHFR	NM_010049.3	NM_010049.3		13361	68299777	NM_010049.3	Dhfr	NP_034179.1	ILMN_1255201	002850646	S	2033	CATGTTTACGATGTGTCTTAATCATACCAGGTCCTCATCCCCACTCCCCC	13	+	93155751-93155800	13qC3	Mus musculus dihydrofolate reductase (Dhfr), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycine, aminoethanoic acid [goid 6545] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 5,6,7,8-tetrahydrofolate + NADP+ = 7,8-dihydrofolate + NADPH + H+ [goid 4146] [evidence IDA]	AW555094; AA607882; AI662710; 8430436I03Rik	AW555094; AA607882; AI662710; 8430436I03Rik
Mus musculus	RefSeq	ILMN_197770	ILMN_319027	SLC44A5	NM_001081263.1	NM_001081263.1		242259	134053956	NM_001081263.1	Slc44a5	NP_001074732.1	ILMN_2529301	007380369	S	731	CTACTGGGAATACTATCGCCAATTCTGCAAGGCCAAGGCCAAGCCTGTGG	3	+	153902113-153902162	3qH3-qH4	Mus musculus solute carrier family 44, member 5 (Slc44a5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm422; AA117069	Gm422; AA117069
Mus musculus	MEEBO	ILMN_188416	ILMN_188416	SCL0003151.1_1374	scl0003151.1_1374	AK010153.1			12845398	AK010153.1	scl0003151.1_1374		ILMN_2452484	001780717	S	13	GGTCCAAGGATCACGGTTCAGTGCTGAGGAAAGTGGCATAGGGTTCCACA										
Mus musculus	RefSeq	ILMN_207536	ILMN_207537	JARID1A	XM_359326.6	XM_359326.6		214899	149255408	XM_359326.6	Jarid1a	XP_359326.5	ILMN_1260532	006020408	I	2701	AGTGGGTAGCCGCTTGGGATATCTGCCAGGAAAAGGAACTGGGTCTCTTT	6	+	120324891-120324940	6qF1	PREDICTED: Mus musculus jumonji, AT rich interactive domain 1A (Rbp2 like), transcript variant 1 (Jarid1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_207537	ILMN_207537	JARID1A	XM_359326.6	XM_359326.6		214899	149255408	XM_359326.6	Jarid1a	XP_359326.5	ILMN_1260558	006560307	I	6987	CCGCCAAAGTGGAGCTTGTGAAAGAGAGCACGGAGAAGAAACGGGAGAGG	6	+	120382084-120382133	6qF1	PREDICTED: Mus musculus jumonji, AT rich interactive domain 1A (Rbp2 like), transcript variant 1 (Jarid1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188976	ILMN_207537	JARID1A	XM_359326.6	XM_359326.6		214899	149255408	XM_359326.6	Jarid1a	XP_359326.5	ILMN_2457284	000730324	S	10306	TGTTCTAATGTAAAGCTTTGTTTCACAAGAATTGCAAGTAACTCCATTCT	6	+	120392166-120392215	6qF1	PREDICTED: Mus musculus jumonji, AT rich interactive domain 1A (Rbp2 like), transcript variant 1 (Jarid1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_204516	ILMN_207537	JARID1A	XM_359326.6	XM_359326.6		214899	149255408	XM_359326.6	Jarid1a	XP_359326.5	ILMN_1235304	001470301	S	2069	GCCCCTGAGAGGAAAAGCCCTGAAGGAAACAATAACAAACGAGCGGAGGG	6	+	120314422-120314471	6qF1	PREDICTED: Mus musculus jumonji, AT rich interactive domain 1A (Rbp2 like), transcript variant 1 (Jarid1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189903	ILMN_257676	RGS7BP	NM_029879.2	NM_029879.2		52882	119360349	NM_029879.2	Rgs7bp	NP_084155.2	ILMN_2465437	000160482	S	5395	CCCGATTGGTGAAGATAGTGTCTTATTGTGGGGAATCAAAGCCTTTCCTA	13	-	105737616-105737665	13qD1	Mus musculus regulator of G-protein signalling 7 binding protein (Rgs7bp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	R7bp; D13Bwg1146e; A930030I01Rik; AI842293	R7bp; D13Bwg1146e; A930030I01Rik; AI842293
Mus musculus	RefSeq	ILMN_189903	ILMN_257676	RGS7BP	NM_029879.2	NM_029879.2		52882	119360349	NM_029879.2	Rgs7bp	NP_084155.2	ILMN_2733314	001170709	S	3555	CGGCTCCTGTCTCTGTTGTTTCCCACACTCTGACTGGATTGAACGCTTAG	13	-	105739456-105739505	13qD1	Mus musculus regulator of G-protein signalling 7 binding protein (Rgs7bp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	R7bp; D13Bwg1146e; A930030I01Rik; AI842293	R7bp; D13Bwg1146e; A930030I01Rik; AI842293
Mus musculus	MEEBO	ILMN_193860	ILMN_193860	ADAMTS16	scl43775.23.1_3				25286708	NM_172053	Adamts16		ILMN_1254956	004260180	S	3080	GCCGTGAGCAACCACTGCCCTCCACCTTCCTGTCTGGCTACTTTGTTTAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_193860	ILMN_193860	ADAMTS16	scl43775.23.1_3				25286708	NM_172053	Adamts16		ILMN_2651440	005820722	S	3079	AGCCGTGAGCAACCACTGCCCTCCACCTTCCTGTCTGGCTACTTTGTTTA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_201051	ILMN_201051	LOC381967	XM_358683.1	XM_358683.1			38088200	XM_358683.1	LOC381967		ILMN_1248945	006450286	S	719	AGCGTCCTGTAGCTTGTAGCCAAGTACAAGCCCTGGAGACAGCAATGGCT										
Mus musculus	RefSeq	ILMN_193183	ILMN_234162	TRIM15	NM_001024134.2	NM_001024134.2		69097	118131215	NM_001024134.2	Trim15	NP_001019305.1	ILMN_1246816	007200154	S	1510	ATGGGAATCTTGTGTAGCAAGTCCTTTCACTCCTGTTCCTGGACACGGTG	17	-	37046418-37046467	17qB1	Mus musculus tripartite motif-containing 15 (Trim15), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1810012B10Rik	1810012B10Rik
Mus musculus	RefSeq	ILMN_192027	ILMN_234162	TRIM15	NM_001024134.2	NM_001024134.2		69097	118131215	NM_001024134.2	Trim15	NP_001019305.1	ILMN_2484329	005560142	S	637	ACAGGCTGGAGGAACTAGAACGGCAGATCTGCAAGGAGAGGGAAGAGTAC	17	-	37050497-37050546	17qB1	Mus musculus tripartite motif-containing 15 (Trim15), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1810012B10Rik	1810012B10Rik
Mus musculus	RefSeq	ILMN_209106	ILMN_209106	5330421F07RIK	NM_175272.2	NM_175272.2		78286	31341493	NM_175272.2	5330421F07Rik	NP_780481.1	ILMN_2712053	003370202	S	704	CAGGCTGGCACTCCTCAGCATCAGGGGCTGGCCACTCCCCAAGCCCCGTG	7	+	56664167-56664216	7qB4	Mus musculus RIKEN cDNA 5330421F07 gene (5330421F07Rik), mRNA.				mKIAA3015; AU067780	mKIAA3015; AU067780
Mus musculus	RefSeq	ILMN_209106	ILMN_209106	5330421F07RIK	NM_175272.2	NM_175272.2		78286	31341493	NM_175272.2	5330421F07Rik	NP_780481.1	ILMN_2872992	003370739	S	2759	TCTGTAGAACCCCAGCAGCCCACATAGAACTAGGTGCTCCGTGCTCCTTG	7	+	56709547-56709596	7qB4	Mus musculus RIKEN cDNA 5330421F07 gene (5330421F07Rik), mRNA.				mKIAA3015; AU067780	mKIAA3015; AU067780
Mus musculus	RefSeq	ILMN_209106	ILMN_209106	5330421F07RIK	NM_175272.2	NM_175272.2		78286	31341493	NM_175272.2	5330421F07Rik	NP_780481.1	ILMN_2592597	006520379	S	2961	GTCCTGTGCTGGGTGGTCCCCCAATACCTGTGCATGTAGCAAAATGATCC	7	+	56709749-56709798	7qB4	Mus musculus RIKEN cDNA 5330421F07 gene (5330421F07Rik), mRNA.				mKIAA3015; AU067780	mKIAA3015; AU067780
Mus musculus	Riken	ILMN_207182	ILMN_207182	7330409M10RIK	ri|7330409M10|PX00650B19|AK078629|1947					AK078629	7330409M10Rik		ILMN_2585660	005890279	S	1740	GGTGAGATGGGAGACAGAGACAAGAGAATTCCCAAGAGCTTGTAGGTCTG										
Mus musculus	RefSeq	ILMN_217124	ILMN_217124	RAB4B	NM_029391.2	NM_029391.2		19342	133891837	NM_029391.2	Rab4b	NP_083667.1	ILMN_1249339	004880731	S	1002	TGGCTAACTCTAGTCCCCCTGAGCCCCAAACCCTACCTGAAGAACTCCCA	7	-	27953570-27953619	7qA3	Mus musculus RAB4B, member RAS oncogene family (Rab4b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	1500031G17Rik	1500031G17Rik
Mus musculus	Riken	ILMN_206542	ILMN_206542	PTPN2	ri|2700079O11|ZX00064O07|AK076072|1864					AK076072	Ptpn2		ILMN_1250948	002940468	S	1434	ACAAGCCCAGCATCTCAGGACTCATCACTGCAGGTTCCTCTGAGACCCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192141	ILMN_235396	ZFP248	NM_028335.1	NM_028335.1		72720	58037306	NM_028335.1	Zfp248	NP_082611.1	ILMN_1230997	005570424	S	2059	GGGTGAAAGCTCTTTTAGCATCCTGAGTGTTTAGCTTTCGCATGCCTGTC	6	-	118378889-118378913:118378914-118378938	6qF1	Mus musculus zinc finger protein 248 (Zfp248), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	E130106N01Rik; MGC100019; 2810037F07Rik	E130106N01Rik; MGC100019; 2810037F07Rik
Mus musculus	MEEBO	ILMN_189035	ILMN_189035	E330009J07RIK	scl29095.10_195				31342107	NM_175528	E330009J07Rik		ILMN_2457773	004180674	S	6	GCCTGCATAAGTGGCTGCCAGGCTTTGGGTCAGAGATAAACAAAATCAAC										
Mus musculus	RefSeq	ILMN_210258	ILMN_224448	OLFR553	NM_207621.1	NM_207621.1		233578	46518535	NM_207621.1	Olfr553	NP_997504.1	ILMN_2603782	002900341	S	910	GTGCGCACCAAGCAGATCCGAGAGAGACTTTTGCATATTATTAAGTCTGG	7	-	109762542-109762591	7qE3	Mus musculus olfactory receptor 553 (Olfr553), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR25-2	MOR25-2
Mus musculus	RefSeq	ILMN_213512	ILMN_213512	ICAM4	NM_023892.2	NM_023892.2		78369	110625821	NM_023892.2	Icam4	NP_076381.1	ILMN_2637808	006280092	S	770	CCTCTATAGCCTTGGCCTCTACCTCCATCGCAACCCTGGTGGGGATCCTC	9	+	20834838-20834887	9qA3	Mus musculus intercellular adhesion molecule 4, Landsteiner-Wiener blood group (Icam4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ICAM-4; Cd242; 1810015M19Rik	ICAM-4; Cd242; 1810015M19Rik
Mus musculus	RefSeq	ILMN_233202	ILMN_233202	MORC3	NM_001045529.1	NM_001045529.1		338467	113865910	NM_001045529.1	Morc3	NP_001038994.1	ILMN_2874739	000990008	S	3682	AGCCTGGAGTTAATCATAAATGGGCCTGGGATCATAGCACCATATGCTGT				16qC4	Mus musculus microrchidia 3 (Morc3), mRNA. XM_978468 XM_978538 XM_978584 XM_978615	A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence ISO]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence ISO]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [evidence ISO]		D16Jhu32e; Zcwcc3; NXP2; AI452146; 1110051N18Rik; BF318192	D16Jhu32e; Zcwcc3; NXP2; AI452146; 1110051N18Rik; BF318192
Mus musculus	Riken	ILMN_207196	ILMN_207196	A830007F21RIK	ri|A830007F21|PX00661L13|AK080590|992					AK080590	A830007F21Rik		ILMN_1235638	004010403	S	428	GCCGCATCCTGACTCTAGTGCTACAGGTTCTCACGCGGTTTTTGGCCTCT										
Mus musculus	RefSeq	ILMN_221914	ILMN_221914	CST6	NM_028623.4	NM_028623.4		73720	146141107	NM_028623.4	Cst6	NP_082899.1	ILMN_1247676	006450538	S	3260	GTCTCCATCCACTAGAAGGATAAGAGGCCTTCTCTAGGCCTCCACTAAGG				19qA	Mus musculus cystatin E/M (Cst6), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IDA]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]	 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	ichq; 1110017E11Rik; N28197	ichq; 1110017E11Rik; N28197
Mus musculus	RefSeq	ILMN_197279	ILMN_324030	LOC676672	XR_033874.1	XR_033874.1		676672	149249481	XR_033874.1	LOC676672		ILMN_1236130	001240768	S	894	GCATGAACCAGCAATATTACCTTGATGGAAACTCCCAGTATGGCCAACAG					PREDICTED: Mus musculus similar to Ss18 protein (LOC676672), misc RNA.					
Mus musculus	Riken	ILMN_207108	ILMN_207108	6430553K24RIK	ri|6430553K24|PX00648N21|AK078268|1214					AK078268	6430553K24Rik		ILMN_2585096	006480025	S	906	GGAGTTCATGCCGACAGATGGCACAGATGTTAAGGTTATGGTGGATGCAG										
Mus musculus	RefSeq	ILMN_220581	ILMN_220581	HOXA6	NM_010454.1	NM_010454.1		15403	27544942	NM_010454.1	Hoxa6	NP_034584.1	ILMN_2724039	003850343	S	638	ATAAACTCATCAACTCCACGCAGGCCAGCGGGGAAGACTCTGAGGCCAAA	6	-	52156375-52156424	6qB3	Mus musculus homeo box A6 (Hoxa6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hox-1.2	Hox-1.2
Mus musculus	RefSeq	ILMN_199879	ILMN_199879	LOC381536	XM_355504.1	XM_355504.1			38078615	XM_355504.1	LOC381536		ILMN_1218931	004880750	S	1247	CAAGTGGCCAAGAGTGATGGAAAGCAAGGGAAGCCGCTGAGGTGTGGCTG										
Mus musculus	RefSeq	ILMN_222330	ILMN_222330	ADORA2B	NM_007413.4	NM_007413.4		11541	145966718	NM_007413.4	Adora2b	NP_031439.2	ILMN_1244424	007000289	S	1244	GCCTGGAGTTACACAAGTCTGGCTGACATGCAAATTGGAGGCTCCGTGGC				11qB2	Mus musculus adenosine A2b receptor (Adora2b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IEA]	MGC144574; AI605384; MGC144575; AI480866	MGC144574; AI605384; MGC144575; AI480866
Mus musculus	RefSeq	ILMN_211300	ILMN_211300	EGFR	NM_207655.2	NM_207655.2		13649	90403617	NM_207655.2	Egfr	NP_997538.1	ILMN_2693922	004010224	S	5823	GAGCCTGTCAGGTACCTATCAGGAGCGGTAATCCGTGAGAGAGAACCGTT	11	+	16813768-16813817	11qA2	Mus musculus epidermal growth factor receptor (Egfr), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence ISO]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IGI]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence ISO]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [evidence IDA]	wa-2; Erbb; 9030024J15Rik; AI552599; Errp; Wa5; wa2	wa-2; Erbb; 9030024J15Rik; AI552599; Errp; Wa5; wa2
Mus musculus	RefSeq	ILMN_214966	ILMN_214966	PCTK3	NM_008795.1	NM_008795.1		18557	6679232	NM_008795.1	Pctk3	NP_032821.1	ILMN_1229145	001710279	S	242	AGTCCGCCGCGGCGGCCAGAGAGGGGCACCGCGCCGGGCAAGCTGAGCAA	1	-	134019021-134019037:134035987-134036019	1qE4	Mus musculus PCTAIRE-motif protein kinase 3 (Pctk3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	AA682070	AA682070
Mus musculus	Riken	ILMN_205979	ILMN_205979	D130060M14RIK	ri|D130060M14|PX00185H22|AK051624|1630					AK051624	D130060M14Rik		ILMN_2576627	007200685	S	1108	GGAAAGCGTCTCTGATAAGAAGGGGAGGCCAGCACAGCACCTTAGGAGAG										
Mus musculus	Riken	ILMN_202531	ILMN_202531	2410187C16RIK	ri|2410187C16|ZX00082A10|AK010831|787					AK010831	2410187C16Rik		ILMN_1225072	004880020	S	605	GGACGGGTGGATCCCTGAAGCTGGCTACGTTAGTTGGACCAGTGAAGTCC										
Mus musculus	MEEBO	ILMN_185041	ILMN_185041	SCL0001187.1_2	scl0001187.1_2						scl0001187.1_2		ILMN_2423685	004010754	S	19	GCTCAGGTCATCAGGTTTGGAGGCAAGAGCCCTTATCTGCTGAGCCATCT										
Mus musculus	RefSeq	ILMN_198877	ILMN_198877	LOC234281	XM_146376.2	XM_146376.2			38089270	XM_146376.2	LOC234281		ILMN_2533239	005560735	S	1575	GGAAGATGGGCCTGGTGCTGACTTCCTCACAATGAAGCATTGTGATGTGC										
Mus musculus	RefSeq	ILMN_198512	ILMN_247722	GIPR	NM_001080815.1	NM_001080815.1		381853	124249102	NM_001080815.1	Gipr	NP_001074284.1	ILMN_1248457	004730470	S	1514	GTGCCTGGGGATGAGGTCTTGGAAAGTTACTGCTAGGTAAAGGGACCCCC	7	-	19742702-19742716:19742717-19742751	7qA3	Mus musculus gastric inhibitory polypeptide receptor (Gipr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with gastric inhibitory peptide to initiate a change in cell activity [goid 16519] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence TAS]	Gm160; Gm1081; GIP-R	Gm160; Gm1081; GIP-R
Mus musculus	RefSeq	ILMN_248037	ILMN_248037	GM815	NM_001033407.1	NM_001033407.1		329047	85701912	NM_001033407.1	Gm815	NP_001028579.1	ILMN_2975865	004040451	S	302	TGCCACATGCAGAACGGGCTGTGGGTAGTGGCGCGTTTAACATCTGCCTT	19	+	26955428-26955477	19qC1	Mus musculus gene model 815, (NCBI) (Gm815), mRNA.					
Mus musculus	RefSeq	ILMN_188060	ILMN_313526	1700123L14RIK	NR_003643.1	NR_003643.1		78482	153792035	NR_003643.1	1700123L14Rik		ILMN_1253133	005420753	S	1386	GGTCACCATGCTAATTCGGGTAAAAACAAGTAAGGATGCGGATGAACTGC				6qD3	Mus musculus RIKEN cDNA 1700123L14 gene (1700123L14Rik), non-coding RNA.					
Mus musculus	Riken	ILMN_205591	ILMN_205591	E430025C17RIK	ri|E430025C17|PX00100L15|AK088749|2448					AK088749	E430025C17Rik		ILMN_1245830	006520228	S	2123	CTGGGGAGATGTCATACATAACCTAAAAGAACACATATACCACCCCAGGC										
Mus musculus	RefSeq	ILMN_212182	ILMN_212182	IRF4	NM_013674.1	NM_013674.1		16364	7305518	NM_013674.1	Irf4	NP_038702.1	ILMN_2623699	001010397	S	4428	GACACTGCTACAGGCTTCACAATCTTCAAGGTGGACCCACCTCATGTGGA	13	+	30858541-30858590	13qA3.2	Mus musculus interferon regulatory factor 4 (Irf4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	IRF-4; AI385587; Spip; LSIRF	IRF-4; AI385587; Spip; LSIRF
Mus musculus	RefSeq	ILMN_192296	ILMN_230302	AMY1	NM_007446.1	NM_007446.1		11722	6996908	NM_007446.1	Amy1	NP_031472.1	ILMN_2626453	004850164	S	1348	ACCAAAGAAGTGAGCATTAACCCAGACAGCACTTGTGGCAATGACTGGAT	3	-	113261266-113261315	3qF3	Mus musculus amylase 1, salivary (Amy1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the endohydrolysis of 1,4-alpha-D-glucosidic linkages in polysaccharides containing three or more 1,4-alpha-linked D-glucose units [goid 4556] [evidence IEA]; Catalysis of the hydrolysis of amylose or an amylose derivative [goid 16160] [evidence IDA]	C030014B17Rik; Amy-1	C030014B17Rik; Amy-1
Mus musculus	RefSeq	ILMN_230302	ILMN_230302	AMY1	NM_007446.1	NM_007446.1		11722	6996908	NM_007446.1	Amy1	NP_031472.1	ILMN_3000818	006400113	S	961	GGTGGTGAGGCAGTGTCAAGTAATGAGTATTTTGGAAATGGCCGTGTGAC	3	-	113265617-113265666	3qF3	Mus musculus amylase 1, salivary (Amy1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the endohydrolysis of 1,4-alpha-D-glucosidic linkages in polysaccharides containing three or more 1,4-alpha-linked D-glucose units [goid 4556] [evidence IEA]; Catalysis of the hydrolysis of amylose or an amylose derivative [goid 16160] [evidence IDA]	C030014B17Rik; Amy-1	C030014B17Rik; Amy-1
Mus musculus	MEEBO	ILMN_195898	ILMN_195898	NAP1L4	scl9239.1.1_1				6679011	NM_008672	Nap1l4		ILMN_1216929	001990463	S	19	GCCTGCCTGGCATGGGACTACCCTTCTGATAGAAAAGTTCAGCACATCTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_195898	ILMN_195898	NAP1L4	scl9239.1.1_1				6679011	NM_008672	Nap1l4		ILMN_2769696	002940072	S	2143	ACAGCCATGTCCACAGTGACCAGCCATGTAGAGTGTGCTCAGCCTTACCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_219575	ILMN_219575	CYP46A1	NM_010010.1	NM_010010.1		13116	6753589	NM_010010.1	Cyp46a1	NP_034140.1	ILMN_2781557	003130403	S	1400	GGAGGTGAAAGTTGTCATGGCCAAGCTGCTTCAGAGGATCGAGTTCCGGC	12	+	109599726-109599775	12qF1	Mus musculus cytochrome P450, family 46, subfamily a, polypeptide 1 (Cyp46a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: cholesterol + NADPH + H+ + O2 = (24S)-24-hydroxycholesterol + NADP+ + H2O [goid 33781] [evidence IEA]	Cyp46	Cyp46
Mus musculus	RefSeq	ILMN_213143	ILMN_238710	WDR67	NM_001081396.1	NM_001081396.1		210544	124487108	NM_001081396.1	Wdr67	NP_001074865.1	ILMN_1259544	006110324	S	373	GCACAGCTCTGGCCTTTAATCTTCGTAGAAAGTCTGAGTTCCTTGTGGCG	15	+	57751518-57751567	15qD1	Mus musculus WD repeat domain 67 (Wdr67), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	Gm85; D330013L20Rik; 4-B-3; MGC76603	Gm85; D330013L20Rik; 4-B-3; MGC76603
Mus musculus	RefSeq	ILMN_207496	ILMN_312076	LOC668837	XR_034960.1	XR_034960.1		668837	149265877	XR_034960.1	LOC668837		ILMN_2587859	002690097	I	374	CTTCTGATTTGAGTTCTTATTTGAATGTTCTTGGACCATGTGTAACAGGA	14	+	121226707-121226756	14qE5	PREDICTED: Mus musculus similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G (LOC668837), misc RNA.					
Mus musculus	RefSeq	ILMN_220463	ILMN_220463	LHX2	NM_010710.3	NM_010710.3		16870	142382898	NM_010710.3	Lhx2	NP_034840.1	ILMN_2722383	004070482	S	1647	CCCACAGCCCTTCACAAACGACTCTTACCAACCTTTTCTAATGACTCGCC	2	+	38224609-38224649:38224650-38224658	2qB	Mus musculus LIM homeobox protein 2 (Lhx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived [goid 21537] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Lh-2; apterous; Lim2; LH2A; ap	Lh-2; apterous; Lim2; LH2A; ap
Mus musculus	RefSeq	ILMN_192442	ILMN_214076	TMED1	NM_010744.3	NM_010744.3		17083	141802999	NM_010744.3	Tmed1	NP_034874.2	ILMN_1224114	001740615	S	1357	GGTCTGTCCCAAGCTGACATCCCTAAGCCCAGTCACCAGGCACTATTAAC	9	-	21311904-21311953	9qA3	Mus musculus transmembrane emp24 domain containing 1 (Tmed1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Il1rl1l; Ly84l; St2l	Il1rl1l; Ly84l; St2l
Mus musculus	RefSeq	ILMN_214076	ILMN_214076	TMED1	NM_010744.3	NM_010744.3		17083	141802999	NM_010744.3	Tmed1	NP_034874.2	ILMN_1249428	002230025	S	1107	GTTCTTGCCAGGACAGTCACTTTTATTTGAAAGGAAGGAGCCCTGGCCCC	9	-	21312154-21312203	9qA3	Mus musculus transmembrane emp24 domain containing 1 (Tmed1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Il1rl1l; Ly84l; St2l	Il1rl1l; Ly84l; St2l
Mus musculus	RefSeq	ILMN_186173	ILMN_225814	NPNT	NM_001029836.1	NM_001029836.1		114249	71067127	NM_001029836.1	Npnt	NP_001025007.1	ILMN_1252248	001940543	S	1841	CGTCAAAAGCGTCATCTTCAAAGGTGAAAAAAGGCGTGGTCACACGGGGG	3	-	132547437-132547477:132548720-132548728	3qG3	Mus musculus nephronectin (Npnt), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IPI]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IPI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IPI]	1110009H02Rik; POEM; AA682063; AI314031; Nctn	1110009H02Rik; POEM; AA682063; AI314031; Nctn
Mus musculus	RefSeq	ILMN_225814	ILMN_225814	NPNT	NM_001029836.1	NM_001029836.1		114249	71067127	NM_001029836.1	Npnt	NP_001025007.1	ILMN_3154279	005360086	A	3407	AGGACCAGAGGGAACAGGCTTAGGCTAGAGTGTGAGGGGGACTTTCCTGG	3	-	132545871-132545920	3qG3	Mus musculus nephronectin (Npnt), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IPI]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IMP]; Branching of the ureteric bud [goid 1658] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IPI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IPI]	1110009H02Rik; POEM; AA682063; AI314031; Nctn	1110009H02Rik; POEM; AA682063; AI314031; Nctn
Mus musculus	RefSeq	ILMN_198272	ILMN_198272	LOC381140	XM_355056.1	XM_355056.1			38083541	XM_355056.1	LOC381140		ILMN_1218890	005900370	S	2010	TCCTCTTGCCCAGCAGTGGATGGAGCGTCCTTGCTAAAAAGGGTACCTGC										
Mus musculus	RefSeq	ILMN_212111	ILMN_212111	CCDC79	NM_180958.2	NM_180958.2		320022	142348021	NM_180958.2	Ccdc79	NP_851289.1	ILMN_1260204	001780750	S	2599	CTCCTTAACTCTTGTGAGACGGGGAATGATGAAACAGAAATAGTTTAAGT	8	-	106970920-106970969	8qD3	Mus musculus coiled-coil domain containing 79 (Ccdc79), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	BB085179; 4930532D21Rik	BB085179; 4930532D21Rik
Mus musculus	RefSeq	ILMN_213941	ILMN_213941	BTN2A2	NM_175938.3	NM_175938.3		238555	144953892	NM_175938.3	Btn2a2	NP_787952.2	ILMN_1216723	006100605	S	617	CAGCCTATGACAATGGCATCTACTGCTGTTACTTCCAGGAAGGCAGGTCC	13	-	23578031-23578080	13qA3.1	Mus musculus butyrophilin, subfamily 2, member A2 (Btn2a2), mRNA.				D030063K05; Btn2	D030063K05; Btn2
Mus musculus	RefSeq	ILMN_186707	ILMN_260069	CRLS1	NM_025646.3	NM_025646.3		66586	66932976	NM_025646.3	Crls1	NP_079922.2	ILMN_1219797	003450154	S	334	GGAAGTGCTCTTGATCCACTTGCTGATAAAGTTCTTATCAGCATCTTATA	2	+	132680677-132680726	2qF2	Mus musculus cardiolipin synthase 1 (Crls1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]	0610009I22Rik; 4930557M15Rik; 5730490M08Rik; RP23-77H16.4	0610009I22Rik; 4930557M15Rik; 5730490M08Rik; RP23-77H16.4
Mus musculus	RefSeq	ILMN_186707	ILMN_260069	CRLS1	NM_025646.3	NM_025646.3		66586	66932976	NM_025646.3	Crls1	NP_079922.2	ILMN_1231132	006960332	S	1296	GGCATTGAAGTTCACGAGTAGTCTTCCAGCCTCTCAGGTACCAAATAGTT	2	+	132692206-132692255	2qF2	Mus musculus cardiolipin synthase 1 (Crls1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]	0610009I22Rik; 4930557M15Rik; 5730490M08Rik; RP23-77H16.4	0610009I22Rik; 4930557M15Rik; 5730490M08Rik; RP23-77H16.4
Mus musculus	RefSeq	ILMN_214173	ILMN_214173	OLFR448	NM_146273.1	NM_146273.1		258270	22129736	NM_146273.1	Olfr448	NP_666385.1	ILMN_2645100	003890521	S	599	CAGGTTCTGTATTTATCTTAGTGGGACCACTGTGCTTTGTGCTGGTTTCC	6	+	42847050-42847099	6qB2.1	Mus musculus olfactory receptor 448 (Olfr448), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC130305; MOR261-13	MGC130305; MOR261-13
Mus musculus	RefSeq	ILMN_188499	ILMN_317681	1700022N22RIK	XM_001479914.1	XM_001479914.1		69431	149268692	XM_001479914.1	1700022N22Rik	XP_001479964.1	ILMN_1225466	007320215	S	628	CGCTGTGCTCCTGGTTTATTTCTAGCCTTTCCTAGGCAGAGGCGCCTTTT	17	+	26125333-26125382	17qA3.3	PREDICTED: Mus musculus RIKEN cDNA 1700022N22 gene (1700022N22Rik), mRNA.					
Mus musculus	Riken	ILMN_203030	ILMN_203030	6030453H13RIK	ri|6030453H13|PX00057J19|AK031563|2816					AK031563	6030453H13Rik		ILMN_2554192	006100008	S	2621	GATGGTCTTAAGTGACCCCTGTGAATGGGTCATGTGACCCCTGTGAATGG										
Mus musculus	RefSeq	ILMN_186373	ILMN_235503	LOC639928	XM_916561.2	XM_916561.2		639928	94381381	XM_916561.2	LOC639928	XP_921654.1	ILMN_2434982	003140692	S	1679	GGTTTCGTCTTGTTCAGAAGCGAAAGGATCAGGAGCACTTTTTCAACCAG					PREDICTED: Mus musculus similar to transcription elongation regulator 1-like (LOC639928), mRNA.					
Mus musculus	RefSeq	ILMN_220527	ILMN_220527	CCDC43	NM_025918.3	NM_025918.3		52715	146134957	NM_025918.3	Ccdc43	NP_080194.1	ILMN_1247240	005560326	S	1912	CCAGCCACATCCACTTGTCAATAAAGGCCTTCTGTACCTGACTTTGGGCA				11qE1	Mus musculus coiled-coil domain containing 43 (Ccdc43), mRNA.				2610001E01Rik; D11Ertd707e; RP23-57F11.7	2610001E01Rik; D11Ertd707e; RP23-57F11.7
Mus musculus	RefSeq	ILMN_209473	ILMN_209473	KCTD10	NM_026145.3	NM_026145.3		330171	142387975	NM_026145.3	Kctd10	NP_080421.2	ILMN_2596117	006450291	S	2909	CAGAGGGCTCCACCCACAGTCCCTGGTCATGTACGCACATCACACTCTTC	5	-	114813683-114813732	5qF	Mus musculus potassium channel tetramerisation domain containing 10 (Kctd10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	C87062; MGC11654; AW536343	C87062; MGC11654; AW536343
Mus musculus	RefSeq	ILMN_214741	ILMN_209473	KCTD10	NM_026145.3	NM_026145.3		330171	142387975	NM_026145.3	Kctd10	NP_080421.2	ILMN_1259515	002060612	S	2129	GAGAAAGGTATACAACTGTCATGTACAAAGCGAGCTGTACAAACCGTCGC	5	-	114814463-114814512	5qF	Mus musculus potassium channel tetramerisation domain containing 10 (Kctd10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	C87062; MGC11654; AW536343	C87062; MGC11654; AW536343
Mus musculus	RefSeq	ILMN_220738	ILMN_220738	B230118H07RIK	NM_026592.3	NM_026592.3		68170	142375303	NM_026592.3	B230118H07Rik	NP_080868.1	ILMN_2726101	000830026	S	1693	GAGGGAACGAGTAGAGAGGGATACAGGCACTGAAGAAGGATAAGGTGGGC	2	-	101401464-101401513	2qE2	Mus musculus RIKEN cDNA B230118H07 gene (B230118H07Rik), mRNA.				RP23-325I3.1; NWC	RP23-325I3.1; NWC
Mus musculus	RefSeq	ILMN_211862	ILMN_261053	ACTR3B	NM_001004365.1	NM_001004365.1		242894	52345393	NM_001004365.1	Actr3b	NP_001004365.1	ILMN_2620192	002360458	S	1249	AGAAGGACTATGAGGAATACGGCCCAAGCATCTGCCGCCACAACCCTGTC	5	+	25355697-25355746	5qA3	Mus musculus ARP3 actin-related protein 3 homolog B (yeast) (Actr3b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9630005C02; Arp3b; MGC91290; Arp3beta; AW047569; ARP11	9630005C02; Arp3b; MGC91290; Arp3beta; AW047569; ARP11
Mus musculus	RefSeq	ILMN_261053	ILMN_261053	ACTR3B	NM_001004365.1	NM_001004365.1		242894	52345393	NM_001004365.1	Actr3b	NP_001004365.1	ILMN_2933346	003370746	S	1432	GTGCTTTCATCGCCAGTGGGGCCAGGCACGGTCTTCCCAGTAAAGCCATT	5	+	25355880-25355929	5qA3	Mus musculus ARP3 actin-related protein 3 homolog B (yeast) (Actr3b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9630005C02; Arp3b; MGC91290; Arp3beta; AW047569; ARP11	9630005C02; Arp3b; MGC91290; Arp3beta; AW047569; ARP11
Mus musculus	RefSeq	ILMN_213916	ILMN_213916	2010309E21RIK	NM_025591.2	NM_025591.2		66488	31981258	NM_025591.2	2010309E21Rik	NP_079867.1	ILMN_2642188	006860075	S	1483	GTACTATGTTGTATTTATACCAATTAATTACTTGAAACAGTGATACATCT	6	+	86319929-86319978	6qD1	Mus musculus RIKEN cDNA 2010309E21 gene (2010309E21Rik), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			MGC117903; AW124904	MGC117903; AW124904
Mus musculus	RefSeq	ILMN_216503	ILMN_213422	FCHSD1	NM_175684.4	NM_175684.4		319262	118130311	NM_175684.4	Fchsd1	NP_783615.2	ILMN_1227065	001110672	S	2719	CTCATTCTGTTCCCTTTCCCCACCTGCCAACAGGTTGCCTGGCCTGCCTT	18	-	38118546-38118595	18qB3	Mus musculus FCH and double SH3 domains 1 (Fchsd1), mRNA.				A030002D08Rik	A030002D08Rik
Mus musculus	RefSeq	ILMN_213422	ILMN_213422	FCHSD1	NM_175684.4	NM_175684.4		319262	118130311	NM_175684.4	Fchsd1	NP_783615.2	ILMN_1238668	006110184	S	2248	GCATCACCCCCTCCCATTGTTCTCATGTCATTTCTGGAAGTACTCTTTTG	18	-	38119017-38119066	18qB3	Mus musculus FCH and double SH3 domains 1 (Fchsd1), mRNA.				A030002D08Rik	A030002D08Rik
Mus musculus	RefSeq	ILMN_213422	ILMN_213422	FCHSD1	NM_175684.4	NM_175684.4		319262	118130311	NM_175684.4	Fchsd1	NP_783615.2	ILMN_2741189	004780537	S	4117	CCTTCCTGCTCTTTCGTCCTGTTCTTTCAATATGCTCTTCAGACTTCCTC	18	-	38117148-38117197	18qB3	Mus musculus FCH and double SH3 domains 1 (Fchsd1), mRNA.				A030002D08Rik	A030002D08Rik
Mus musculus	RefSeq	ILMN_216652	ILMN_240300	4833417A11RIK	XM_001002305.1	XM_001002305.1		74591	94363434	XM_001002305.1	4833417A11Rik	XP_001002305.1	ILMN_1244508	006550202	S	2806	CTCAATGTGTTTATGTGGGGGTACTGTTACTGTTTTAACGTAGTCAACTC	1	-	71245704-71245711:71245712-71245753	1qC3	PREDICTED: Mus musculus RIKEN cDNA 4833417A11 gene, transcript variant 2 (4833417A11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_243523	ILMN_243523	POLR3G	NM_001081176.1	NM_001081176.1		67486	124487176	NM_001081176.1	Polr3g	NP_001074645.1	ILMN_3074058	002320598	I	321	GCCGGTGCCCCTGAAAACGGGAGAAGATGAGGATTACATGCTGGCCTTGA	13	-	81833712-81833761	13qC3	Mus musculus polymerase (RNA) III (DNA directed) polypeptide G (Polr3g), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		2310047G20Rik; RPC32; RPC7; AV275904	2310047G20Rik; RPC32; RPC7; AV275904
Mus musculus	RefSeq	ILMN_185215	ILMN_256892	UCHL5	NM_019562.1	NM_019562.1		56207	9625046	NM_019562.1	Uchl5	NP_062508.1	ILMN_1226422	006580242	S	325	GCTTGTGCCACTCAGGCTATCGTAAGTGTACTACTGAACTGTACGCATCA	1	+	145641419-145641468	1qF	Mus musculus ubiquitin carboxyl-terminal esterase L5 (Uchl5), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Uch37; 5830413B11Rik	Uch37; 5830413B11Rik
Mus musculus	RefSeq	ILMN_256892	ILMN_256892	UCHL5	NM_019562.1	NM_019562.1		56207	9625046	NM_019562.1	Uchl5	NP_062508.1	ILMN_2793503	004250400	S	793	GCAGAGGAGGAACCCATGGATACAGATCAAGGTAGTACCGTGTTAAGTGC	1	+	145645618-145645623:145647051-145647094	1qF	Mus musculus ubiquitin carboxyl-terminal esterase L5 (Uchl5), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Uch37; 5830413B11Rik	Uch37; 5830413B11Rik
Mus musculus	RefSeq	ILMN_185215	ILMN_256892	UCHL5	NM_019562.1	NM_019562.1		56207	9625046	NM_019562.1	Uchl5	NP_062508.1	ILMN_1240153	001340707	S	794	CAGAGGAGGAACCCATGGATACAGATCAAGGTAGTACCGTGTTAAGTGCT	1	+	145645619-145645623:145647051-145647095	1qF	Mus musculus ubiquitin carboxyl-terminal esterase L5 (Uchl5), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Uch37; 5830413B11Rik	Uch37; 5830413B11Rik
Mus musculus	RefSeq	ILMN_219901	ILMN_219901	PIH1D2	NM_028300.1	NM_028300.1		72614	30794141	NM_028300.1	Pih1d2	NP_082576.1	ILMN_2714997	007550301	S	1169	ATTAATACAGAAATGACTACAGCAAAATTTGTCAAAAATAAATCTGCATT	9	+	50433032-50433081	9qA5.3	Mus musculus PIH1 domain containing 2 (Pih1d2), mRNA.				2700059L22Rik	2700059L22Rik
Mus musculus	RefSeq	ILMN_191771	ILMN_243181	DNM3	NM_001038619.1	NM_001038619.1		103967	84490430	NM_001038619.1	Dnm3	NP_001033708.1	ILMN_1214059	006100639	S	4450	GCAACATACAAAGGGGTATTTTTCAACCTTTAAGTGACATAGAAGAGCTC	1	-	163920452-163920501	1qH2.1	Mus musculus dynamin 3 (Dnm3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B230343F03Rik; 9630020E24Rik; AW061159; C530045C17; mKIAA0820	B230343F03Rik; 9630020E24Rik; AW061159; C530045C17; mKIAA0820
Mus musculus	RefSeq	ILMN_215684	ILMN_215684	SUMO3	NM_019929.3	NM_019929.3		20610	141801940	NM_019929.3	Sumo3	NP_064313.1	ILMN_2776231	004850543	S	461	CAGAAGCCAGAGTCACCGAAGGATTCTCCTTTTCCGACGCGCTTGGAGTG	10	+	77079044-77079093	10qC1	Mus musculus SMT3 suppressor of mif two 3 homolog 3 (yeast) (Sumo3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]	2810014B19Rik; SMT3A; AW121497; SUMO-3; D10Ertd345e; AA409334; AW536077; Smt3h1	2810014B19Rik; SMT3A; AW121497; SUMO-3; D10Ertd345e; AA409334; AW536077; Smt3h1
Mus musculus	Riken	ILMN_203890	ILMN_203890	NID1	ri|C430046P06|PX00080C14|AK049585|3804					AK049585	Nid1		ILMN_2560756	003140370	S	3742	AGGCCAGCTTGGTCTCCATAGCGAGTTCCAGGCCAGGCAATGTTACGTGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence TAS]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IPI]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The process whose specific outcome is the progression of the glomerular basement membrane over time, from its formation to the mature structure. The glomerular basement membrane is the basal laminal portion of the glomerulus which performs the actual filtration [goid 32836] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_217944	ILMN_217944	RCAN3	NM_022980.4	NM_022980.4		53902	141802845	NM_022980.4	Rcan3	NP_075356.1	ILMN_2732695	004900632	S	4911	ATCAGCTTCAACTGTCCTGTGTCCTGAGGCTTTCGAACATTCCTTGTCCT	4	-	134968325-134968374	4qD3	Mus musculus regulator of calcineurin 3 (Rcan3), mRNA.		A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IEA]		Csp3; Dscr1l2; AU041093	Csp3; Dscr1l2; AU041093
Mus musculus	RefSeq	ILMN_217944	ILMN_217944	RCAN3	NM_022980.4	NM_022980.4		53902	141802845	NM_022980.4	Rcan3	NP_075356.1	ILMN_1227610	002710546	S	878	AGAAAATCACGCAGACGCGGCGCCCGGAGGCTCCCACGGCGGCACTGAGT	4	-	134972358-134972407	4qD3	Mus musculus regulator of calcineurin 3 (Rcan3), mRNA.		A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IEA]		Csp3; Dscr1l2; AU041093	Csp3; Dscr1l2; AU041093
Mus musculus	Riken	ILMN_204793	ILMN_204793	SKD3	ri|1810017J14|ZX00096C15|AK028101|1534					AK028101	Skd3		ILMN_2567653	004780747	S	1188	GTCCTCTGTAAAGGGGGATAAAAATCAGCCTGCCTTTGTGTAACCCCAAG										
Mus musculus	Riken	ILMN_202649	ILMN_202649	E430039I23RIK	ri|E430039I23|PX00101I05|AK089103|627					AK089103	E430039I23Rik		ILMN_2551227	001010228	S	497	GCCTTCTTCCTCACTGTGAGGACTCCAGAGGACACACGATGGCATCGTGG										
Mus musculus	RefSeq	ILMN_214403	ILMN_214403	SPP2	NM_029269.1	NM_029269.1		75396	15082217	NM_029269.1	Spp2	NP_083545.1	ILMN_2903540	004860068	S	404	GTGATCCCTCCACCTGTGCCTTCCAAAGGGGCTACTCTGTGCCAACAGCT	1	+	90242360-90242399:90243422-90243431	1qD	Mus musculus secreted phosphoprotein 2 (Spp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The continuous turnover of bone matrix and mineral that involves first, an increase in resorption (osteoclastic activity) and later, reactive bone formation (osteoblastic activity). The process of bone remodeling takes place in the adult skeleton at discrete foci. The process ensures the mechanical integrity of the skeleton throughout life and plays an important role in calcium homeostasis. An imbalance in the regulation of bone resorption and bone formation results in many of the metabolic bone diseases, such as osteoporosis [goid 46849] [evidence IEA]		pp-24; spp24; 0610038O04Rik	pp-24; spp24; 0610038O04Rik
Mus musculus	Riken	ILMN_203776	ILMN_203776	A230057H21RIK	ri|A230057H21|PX00128G21|AK038727|2026					AK038727	A230057H21Rik		ILMN_1227029	003460521	S	1302	CCAAGCCTTACTCGCAGCAGGACAGGAGTGAGAACTTTCCCTTTGTTAGC										
Mus musculus	RefSeq	ILMN_228363	ILMN_228363	SLC45A4	NM_001033219.1	NM_001033219.1		106068	85701719	NM_001033219.1	Slc45a4	NP_001028391.1	ILMN_2886162	004220672	S	3215	GCTAGGCTTGCCCATACCATGCGAGCTGGAGTTCCTTCCCAGAGCACAGT	15	-	73408924-73408973	15qD3	Mus musculus solute carrier family 45, member 4 (Slc45a4), mRNA. XM_898255 XM_898268 XM_907823 XM_920555 XM_920562 XM_920569 XM_920578 XM_920594	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		9330175B01Rik; AW552276	9330175B01Rik; AW552276
Mus musculus	RefSeq	ILMN_241004	ILMN_241004	EG237009	NM_207241.1	NM_207241.1		237009	46402238	NM_207241.1	EG237009	NP_997124.1	ILMN_2779647	003780553	S	596	ACGCAGATGACCCTCTGGTTCCTGAAATTGCTAAAGTCTACCACAAGGAT	X	+	111022738-111022787	XqE1	Mus musculus predicted gene, EG237009 (EG237009), mRNA.				MGC58426	MGC58426
Mus musculus	MEEBO	ILMN_217860	ILMN_217860	CKLF5	scl000553.1_41				24308933	AF401531	CKLF5		ILMN_1239969	000050228	S	440	CCCTGGACTTCAACTCATGTCGGCACTAAGCAACTTCCTGGGAGACTAGG										
Mus musculus	RefSeq	ILMN_239837	ILMN_239837	2510009E07RIK	NM_001001881.1	NM_001001881.1		72190	49457852	NM_001001881.1	2510009E07Rik	NP_001001881.1	ILMN_3128859	002260487	A	1624	TGAGCCAGGAGGATAATGGGATCAGGGGAAGGAGAGTGGAGTTGGCCTGG	16	-	21652557-21652606	16qB1	Mus musculus RIKEN cDNA 2510009E07 gene (2510009E07Rik), mRNA.				AI194952	AI194952
Mus musculus	RefSeq	ILMN_204340	ILMN_239837	2510009E07RIK	NM_001001881.1	NM_001001881.1		72190	49457852	NM_001001881.1	2510009E07Rik	NP_001001881.1	ILMN_1224572	000870370	S	4242	GAGCCTCCGATCAGAAGCACATGGCTGTTTTCTGACAAGCCTTTAGGACA	16	-	21649939-21649988	16qB1	Mus musculus RIKEN cDNA 2510009E07 gene (2510009E07Rik), mRNA.				AI194952	AI194952
Mus musculus	RefSeq	ILMN_239837	ILMN_239837	2510009E07RIK	NM_001001881.1	NM_001001881.1		72190	49457852	NM_001001881.1	2510009E07Rik	NP_001001881.1	ILMN_3052390	007610239	I	4925	ACGTGGGTTAAGGCTGTCTGTCCTTTGCAGTAGTCACCTGCTGTGCTAGG	16	-	21649256-21649305	16qB1	Mus musculus RIKEN cDNA 2510009E07 gene (2510009E07Rik), mRNA.				AI194952	AI194952
Mus musculus	RefSeq	ILMN_215503	ILMN_215503	NARFL	NM_026238.2	NM_026238.2		67563	31981016	NM_026238.2	Narfl	NP_080514.2	ILMN_2660391	003060148	S	2449	GTGGATGGAAGGAGGGCCCTTAATAAATGACCTTCTCTGGTGCCAGGGAC	17	+	25510850-25510899	17qA3.3	Mus musculus nuclear prelamin A recognition factor-like (Narfl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			9030612I22Rik; PRN; AI504405	9030612I22Rik; PRN; AI504405
Mus musculus	RefSeq	ILMN_215503	ILMN_215503	NARFL	NM_026238.2	NM_026238.2		67563	31981016	NM_026238.2	Narfl	NP_080514.2	ILMN_2963424	006960561	S	2373	TCCTCTCTGCAGGGAAGAATATGCTGGGGAATTGTGGGGCTGGCCAGCTG	17	+	25510774-25510823	17qA3.3	Mus musculus nuclear prelamin A recognition factor-like (Narfl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			9030612I22Rik; PRN; AI504405	9030612I22Rik; PRN; AI504405
Mus musculus	Riken	ILMN_205263	ILMN_205263	E330019I03RIK	ri|E330019I03|PX00211P06|AK054364|1611					AK054364	E330019I03Rik		ILMN_2571225	003390452	S	1227	GGTTGCCCTGAGCACATGACTGGCAAGCAACGGGAAGAGGAAGGATCCAT										
Mus musculus	RefSeq	ILMN_196889	ILMN_196889	LOC380750	XM_358417.1	XM_358417.1			38049415	XM_358417.1	LOC380750		ILMN_2526152	003450348	S	306	TTGTCAGAGGACAAGACGCCAAGAGCACACAGCTATGCCCGCACCACGCC										
Mus musculus	RefSeq	ILMN_219945	ILMN_219945	CPLX2	NM_009946.2	NM_009946.2		12890	84370333	NM_009946.2	Cplx2	NP_034076.1	ILMN_1238436	001500040	S	270	TGCGAATTCAGCCACGGGCTAGAGAGCATTAACCAAAGCCTGCAGGATGG	13	+	54479987-54480032:54480033-54480036	13qB1	Mus musculus complexin 2 (Cplx2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence ISO]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell [goid 43303] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]	Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IEA]; Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence ISO]	AI413745; 921-L; AW492120	AI413745; 921-L; AW492120
Mus musculus	RefSeq	ILMN_198930	ILMN_198930	LOC235997	XM_142573.1	XM_142573.1			20948633	XM_142573.1	LOC235997		ILMN_2533427	000650348	S	612	CCTGGCAGGGGGTACCTTCTCTGTGGCTTTTCTGGCTAGAGACTTACCAG										
Mus musculus	RefSeq	ILMN_253310	ILMN_253310	ZFP575	NM_001033205.1	NM_001033205.1		101544	85701717	NM_001033205.1	Zfp575	NP_001028377.1	ILMN_2817873	004060768	S	2270	CCACACACCCATAGTTCCAGCACTCAGAGGGCAGAGGCAGAAAGACTGCA	7	-	24293019-24293068	7qA3	Mus musculus zinc finger protein 575 (Zfp575), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI326876; Znf575	AI326876; Znf575
Mus musculus	RefSeq	ILMN_207526	ILMN_207526	D16BWG1494E	XM_358773.1	XM_358773.1			38080439	XM_358773.1	D16Bwg1494e		ILMN_2587980	004760452	I	299	GGAGCAGCTAAGTCAACAGCGAGCGGAGCAGCAACTAGGGAACCAGCTTG										
Mus musculus	RefSeq	ILMN_213950	ILMN_213950	ANKRD27	NM_178263.3	NM_178263.3		245886	125988396	NM_178263.3	Ankrd27	NP_839994.1	ILMN_2642645	001110138	S	1685	GACAAATGGTGAAACTCAGTAGTACTCAGAAAGATCTCCAGGCTGAAGTC	7	+	36393889-36393938	7qB2	Mus musculus ankyrin repeat domain 27 (VPS9 domain) (Ankrd27), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]	The directed movement of substances, in membrane-bounded vesicles, from the early sorting endosomes to the late sorting endosomes; transport occurs along microtubules and can be experimentally blocked with microtubule-depolymerizing drugs [goid 45022] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]	MGC25907; BC016493; Varp; D330003H11Rik; AA408090	MGC25907; BC016493; Varp; D330003H11Rik; AA408090
Mus musculus	RefSeq	ILMN_242220	ILMN_242220	BB014433	NM_001007591.1	NM_001007591.1		434285	56090512	NM_001007591.1	BB014433	NP_001007592.1	ILMN_2926002	006040609	S	180	CTCTTACAACTGTGGGAAATCCACGGCCTGTTGCATCACTGCAGACCCAG	8	-	15042944-15042993	8qA1.1	Mus musculus expressed sequence BB014433 (BB014433), mRNA.					
Mus musculus	Riken	ILMN_201723	ILMN_201723	1810044B20RIK	ri|1810044B20|ZX00043A05|AK007768|555					AK007768	1810044B20Rik		ILMN_1213868	001990253	S	220	GCACTCTGTCCAGGAAAGGTCCTTCTGCCCAGGCCCAGGTGTTGTAATTC										
Mus musculus	RefSeq	ILMN_199908	ILMN_199908	LOC384062	XM_357395.1	XM_357395.1			38078866	XM_357395.1	LOC384062		ILMN_1218089	006220181	S	691	GTTGGCGAATGTGGACACAGCTGCGGGGAACCAACTGGTGTAGCAGGTGA										
Mus musculus	RefSeq	ILMN_191849	ILMN_259092	CNNM3	NM_053186.2	NM_053186.2		94218	88196781	NM_053186.2	Cnnm3	NP_444416.2	ILMN_1216036	005310292	S	4378	CCTTGGTCTCGTCCATGAGCCTGTTCGTGTTTTCAGCTTGGCAACTGGTC	1	+	36584276-36584325	1qB	Mus musculus cyclin M3 (Cnnm3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Acdp3	Acdp3
Mus musculus	RefSeq	ILMN_191849	ILMN_259092	CNNM3	NM_053186.2	NM_053186.2		94218	88196781	NM_053186.2	Cnnm3	NP_444416.2	ILMN_2714372	006200711	S	1356	GTCACCCTGGAGGACGTCATCGAGGAGATCATCAAGTCTGAGATCTTGGA	1	+	36575874-36575923	1qB	Mus musculus cyclin M3 (Cnnm3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Acdp3	Acdp3
Mus musculus	RefSeq	ILMN_223075	ILMN_223075	RPL36AL	NM_025589.1	NM_025589.1		66483	13385037	NM_025589.1	Rpl36al	NP_079865.1	ILMN_2967528	005690142	S	32	AGTCGGGGATCGCGGCGGCCGGTCTCTCGTTCTCATCGCAGACACTTCTA	12	-	70101747-70101770:70102588-70102613	12qC2	Mus musculus ribosomal protein L36a-like (Rpl36al), mRNA.				RPL36A; 2410038A03Rik	RPL36A; 2410038A03Rik
Mus musculus	RefSeq	ILMN_210479	ILMN_210479	FLRT3	NM_178382.2	NM_178382.2		71436	31341631	NM_178382.2	Flrt3	NP_848469.1	ILMN_1229680	004390470	S	2761	CCCGCTGTGTTGAACAATCAGGACTGCGTTCACATGAGACCCTTGTAGTA	2	-	140350805-140350854	2qF3	Mus musculus fibronectin leucine rich transmembrane protein 3 (Flrt3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			5530600M07Rik; mKIAA1469; C430047I10Rik	5530600M07Rik; mKIAA1469; C430047I10Rik
Mus musculus	RefSeq	ILMN_186750	ILMN_186750	TNFAIP2	NM_009396.1	NM_009396.1		21928	6678374	NM_009396.1	Tnfaip2	NP_033422.1	ILMN_2841290	007400601	S	3021	ACAGTCTCCACTGGTTCGGATCCCACTGTGACTTAGGATCCCCGTGACTG	12	+	112692736-112692785	12qF1	Mus musculus tumor necrosis factor, alpha-induced protein 2 (Tnfaip2), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Tnfip2; tnfb94	Tnfip2; tnfb94
Mus musculus	RefSeq	ILMN_186750	ILMN_186750	TNFAIP2	NM_009396.1	NM_009396.1		21928	6678374	NM_009396.1	Tnfaip2	NP_033422.1	ILMN_2841289	001070630	S	3324	CAGGTACTTGCTGGAGCTGGCCAGGGTGAGCAGCACACACAGCCTTTGTA	12	+	112693039-112693088	12qF1	Mus musculus tumor necrosis factor, alpha-induced protein 2 (Tnfaip2), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Tnfip2; tnfb94	Tnfip2; tnfb94
Mus musculus	RefSeq	ILMN_186750	ILMN_186750	TNFAIP2	NM_009396.1	NM_009396.1		21928	6678374	NM_009396.1	Tnfaip2	NP_033422.1	ILMN_2474858	003840750	S	3112	AACTCCTGTCACCCAATAGTCATTGGCTCTGGGGACCAGTGGGTCCCACG	12	+	112692827-112692876	12qF1	Mus musculus tumor necrosis factor, alpha-induced protein 2 (Tnfaip2), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		Tnfip2; tnfb94	Tnfip2; tnfb94
Mus musculus	RefSeq	ILMN_199858	ILMN_199858	LOC381519	XM_358604.1	XM_358604.1			38078259	XM_358604.1	LOC381519		ILMN_2536738	000990731	S	368	CTTTCCGGCCTCCGCTCAAAGTTTCCTTGGCGCAGACGCTTGGGCGCAAG										
Mus musculus	RefSeq	ILMN_222287	ILMN_222287	DGAT2L4	NM_177746.3	NM_177746.3		245532	50355955	NM_177746.3	Dgat2l4	NP_808414.2	ILMN_1215115	002650717	S	1403	CTGGGTATCTCAAGAGCCAGGGGACATTGGGTTCAGTCCGTAGCATGCTC	X	-	97597701-97597750	XqC3	Mus musculus diacylglycerol O-acyltransferase 2-like 4 (Dgat2l4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of wax, which includes C16 and C18 fatty acids [goid 10025] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: a long-chain-alcohol + acyl-CoA = a long-chain ester + CoA [goid 47196] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9430062J17Rik	9430062J17Rik
Mus musculus	RefSeq	ILMN_217711	ILMN_217711	ADRA2C	NM_007418.2	NM_007418.2		11553	26024218	NM_007418.2	Adra2c	NP_031444.1	ILMN_3073643	003060131	I	3097	CCCCTGAGCTCCCCATACCCCCAACAGGCACAGACTAAGGTATAGAGTGC	5	+	35624459-35624508	5qB2	Mus musculus adrenergic receptor, alpha 2c (Adra2c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IDA];  [goid 4935] [evidence IEA];  [goid 4938] [evidence TAS]	alpha2-C4; Adra-2c; [a]2C; alpha2C	alpha2-C4; Adra-2c; [a]2C; alpha2C
Mus musculus	RefSeq	ILMN_217711	ILMN_217711	ADRA2C	NM_007418.2	NM_007418.2		11553	26024218	NM_007418.2	Adra2c	NP_031444.1	ILMN_1235741	007330348	S	2902	CCTATGACCTGAAAAAGGCATCTGTCTGGGGGAGGAGAGATAGCACAGGC	5	+	35624264-35624313	5qB2	Mus musculus adrenergic receptor, alpha 2c (Adra2c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IDA];  [goid 4935] [evidence IEA];  [goid 4938] [evidence TAS]	alpha2-C4; Adra-2c; [a]2C; alpha2C	alpha2-C4; Adra-2c; [a]2C; alpha2C
Mus musculus	RefSeq	ILMN_217711	ILMN_217711	ADRA2C	NM_007418.2	NM_007418.2		11553	26024218	NM_007418.2	Adra2c	NP_031444.1	ILMN_3152476	003450326	A	2825	GCTCAGACAACTAAACCACACCAAGAAAGGAGCACACCACCCCCTTCTCG	5	+	35624187-35624236	5qB2	Mus musculus adrenergic receptor, alpha 2c (Adra2c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IDA];  [goid 4935] [evidence IEA];  [goid 4938] [evidence TAS]	alpha2-C4; Adra-2c; [a]2C; alpha2C	alpha2-C4; Adra-2c; [a]2C; alpha2C
Mus musculus	MEEBO	ILMN_221747	ILMN_221747	OLFR1510	scl0258423.1_262				33239055	NM_146431	Olfr1510		ILMN_2776812	005310750	S	839	TTTACACTGTTGTCACTCCATTACTGAATCCGCTCATCTACACCCTGAGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_243171	ILMN_243171	OLFR367	NM_001081010.1	NM_001081010.1		545417	124486589	NM_001081010.1	Olfr367	NP_001074479.1	ILMN_2835002	006420703	S	468	CTGCTCCAACCTCCTGGCCTTATCACTCATACTCCAGATGGCTCAAGTCT	2	+	37126415-37126464	2qB	Mus musculus olfactory receptor 367 (Olfr367), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR128-1	MOR128-1
Mus musculus	RefSeq	ILMN_217079	ILMN_217079	RUSC1	NM_028188.1	NM_028188.1		72296	33859711	NM_028188.1	Rusc1	NP_082464.1	ILMN_2917441	005910762	S	3505	GTGCCAGTATAGTACACATGCCTTTGCCCCCAACCCCGCAGGACCTATGG	3	-	89170059-89170108	3qF1	Mus musculus RUN and SH3 domain containing 1 (Rusc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			NESCA; 2210403N08Rik; AA408288	NESCA; 2210403N08Rik; AA408288
Mus musculus	Riken	ILMN_204345	ILMN_204345	A930011O08RIK	ri|A930011O08|PX00066G06|AK044421|2337					AK044421	A930011O08Rik		ILMN_1224798	003940717	S	1996	GACAACACCAGACAAGTTCCCACTAAGCCTCTGCTACTGTGCGTAGTGAC										
Mus musculus	Riken	ILMN_205422	ILMN_205422	E230017J10RIK	ri|E230017J10|PX00210K19|AK054093|808					AK054093	E230017J10Rik		ILMN_1221226	006400181	S	609	CTAGCGCCTTTCCTTCGAGGAGCTCGAGGCATATTTCAAAAGCTGACAGT										
Mus musculus	RefSeq	ILMN_255427	ILMN_255427	OLFR458	NM_146444.1	NM_146444.1		258436	33238925	NM_146444.1	Olfr458	NP_666655.1	ILMN_2925730	006020132	S	655	GCCTACATTGTGACTGCTATCTTGAAAATCCGCTCTACCCAGGGACGCCG	6	-	42410312-42410361	6qB2.1	Mus musculus olfactory receptor 458 (Olfr458), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR257-4; Olfr301; MOR211-8P; MOR221-4	MOR257-4; Olfr301; MOR211-8P; MOR221-4
Mus musculus	RefSeq	ILMN_223592	ILMN_223592	ITSN2	NM_011365.2	NM_011365.2		20403	46560562	NM_011365.2	Itsn2	NP_035495.2	ILMN_1228349	003310037	S	5418	CGCCACAGCACAGTGCCTTGTACTAGTGTTAACCTGTTCAGCTGTGTTAG	12	+	4720187-4720236	12qA1.1	Mus musculus intersectin 2 (Itsn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	mKIAA1256; Ese2; Sh3d1B; AI327390; Sh3p18	mKIAA1256; Ese2; Sh3d1B; AI327390; Sh3p18
Mus musculus	MEEBO	ILMN_195535	ILMN_195535	SCL000171.1_4	scl000171.1_4						scl000171.1_4		ILMN_2516447	005870224	S	19	CTTCGCCCACAACGATGACTATGCAGTGGTCGGTAGGACACAGCCGTCTG										
Mus musculus	RefSeq	ILMN_249283	ILMN_249283	ANKRD7	NM_029202.1	NM_029202.1		75196	58037400	NM_029202.1	Ankrd7	NP_083478.1	ILMN_2838382	002140131	S	385	GTGAATGGGCGGGGCAAAAGAAGCAGAACACCTTTGCATTTGGCCTGTGC	6	+	18816702-18816727:18817982-18818005	6qA2	Mus musculus ankyrin repeat domain 7 (Ankrd7), mRNA.				4930532L20Rik; AV278427	4930532L20Rik; AV278427
Mus musculus	Riken	ILMN_206791	ILMN_206791	E130118D18RIK	ri|E130118D18|PX00318M18|AK087438|2524					AK087438	E130118D18Rik		ILMN_1252725	003370239	S	2472	GCACCTGTAGCAGCTCACAAGTCTCTGTAACTCCAGTTCCACCTGTGCAC										
Mus musculus	MEEBO	ILMN_213566	ILMN_213566	A630085K21	scl00330828.1_71	NM_177903.2			31342709	NM_177903.2	A630085K21		ILMN_2638431	000130288	S	887	GTAAGCTACCTACCCTAACAGTTCTGCCATACTCCATAGCCAACTTACAC										
Mus musculus	RefSeq	ILMN_210642	ILMN_314319	SH2D5	NM_001099631.1	NM_001099631.1		230863	153792028	NM_001099631.1	Sh2d5	NP_001093101.1	ILMN_2697719	003290750	S	2079	CTAGAGGAAGGCATCGGCCCAGCCAGGGAATGACAAATTCAAGCGTCCCT					Mus musculus SH2 domain containing 5 (Sh2d5), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC036961	BC036961
Mus musculus	RefSeq	ILMN_198020	ILMN_198020	LOC243118	XM_144370.2	XM_144370.2			38080391	XM_144370.2	LOC243118		ILMN_2530196	005090113	S	1216	CTCATGGATACACTACAGATAATTAGGCAGACCAAGAACAGCACCTGTGC										
Mus musculus	RefSeq	ILMN_220551	ILMN_220551	HINT1	NM_008248.2	NM_008248.2		15254	133892228	NM_008248.2	Hint1	NP_032274.1	ILMN_2723631	006290187	S	94	CGGCGACACGATCTTCGGCAAGATCATCCGCAAAGAAATCCCCGCCAAGA	11	+	54680033-54680082	11qB1.3	Mus musculus histidine triad nucleotide binding protein 1 (Hint1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PKCI-1; Ipk1; PRKCNH1; AA673479; Hint	PKCI-1; Ipk1; PRKCNH1; AA673479; Hint
Mus musculus	RefSeq	ILMN_199271	ILMN_199271	LOC195154	XM_111314.2	XM_111314.2			38093672	XM_111314.2	LOC195154		ILMN_1238704	003830070	S	1370	GGATTGAAGCCATCACGAGCTCATGATTGATGACCCGTTCCAACCACACT										
Mus musculus	MEEBO	ILMN_192986	ILMN_192986	2810410D24RIK	scl3938.1.1_28						2810410D24Rik		ILMN_2493144	001240132	S	20	ACTCAACCCTGCAGGTAACAAATACCAGCAGCTCCTTTTCACAGACGTCC										
Mus musculus	MEEBO	ILMN_222289	ILMN_222289	2310004N11RIK	scl074178.11_191				31560066	NM_028800	2310004N11Rik		ILMN_2777175	001980348	S	3272	AGGGTGGGGCCCTCGCTGCTGTCAGGCACTGAGAAGTCCTGTTGTAAAGA										
Mus musculus	Riken	ILMN_201752	ILMN_201752	1700026N20RIK	ri|1700026N20|ZX00047E13|AK006398|1228					AK006398	1700026N20Rik		ILMN_1218124	000540289	S	286	CATCGTCTGCTGCCGCTGAGGTTCTCTGGCCTATAAGAAGTCTGAATGGC										
Mus musculus	RefSeq	ILMN_199998	ILMN_212544	B930011P16RIK	NM_207282.2	NM_207282.2		403186	141802837	NM_207282.2	B930011P16Rik	NP_997165.1	ILMN_2537234	002370553	S	454	TGGTGGGAGCATCGGCGGGATGCACGGGCCTGACTACTCCTCAGGGTCTC	5	+	27376386-27376435	5qB1	Mus musculus RIKEN cDNA B930011P16 gene (B930011P16Rik), mRNA.				Gm1377	Gm1377
Mus musculus	RefSeq	ILMN_212544	ILMN_212544	B930011P16RIK	NM_207282.2	NM_207282.2		403186	141802837	NM_207282.2	B930011P16Rik	NP_997165.1	ILMN_2627619	002970040	S	2466	GGGGGGCAGTGCTCATCAGGTGCTTTATCCGTAATACAACTGTCATGTGA	5	+	27378398-27378447	5qB1	Mus musculus RIKEN cDNA B930011P16 gene (B930011P16Rik), mRNA.				Gm1377	Gm1377
Mus musculus	MEEBO	ILMN_187605	ILMN_187605	9630025H16RIK	scl22077.2.1_2						9630025H16Rik		ILMN_1241526	005870678	S	5	AAGGGCAAGGTCAGCATATCAGCAACGCTCTGTAAACATGAACGTGCCTG										
Mus musculus	RefSeq	ILMN_196980	ILMN_196980	LOC238191	XM_138105.4	XM_138105.4			38050534	XM_138105.4	LOC238191		ILMN_2526472	003890162	S	487	GTCATGGGGTCACATCAACGCTATGGCTGGGCCATGGAACATGAAGGTTC										
Mus musculus	MEEBO	ILMN_219368	ILMN_219368	4921513H07RIK	scl0330426.1_205	XM_287648.2			38085257	XM_287648.2	4921513H07Rik		ILMN_2707818	005690379	S	550	GTGTATGCTTTTGCATATGACTTTAGGGCAGATAGGGATGCAAGGTGGAG										
Mus musculus	RefSeq	ILMN_213056	ILMN_224735	CEP152	NM_001081091.1	NM_001081091.1		99100	124487355	NM_001081091.1	Cep152	NP_001074560.1	ILMN_2633107	001190487	S	5672	GCTGCTTCATTCAGTTACTCAGCCCTCTACCTTTATATTTATATGCTGAC	2	-	125388870-125388919	2qF1	Mus musculus centrosomal protein 152 (Cep152), mRNA.				AI851464; mKIAA0912; RP23-368I1.2	AI851464; mKIAA0912; RP23-368I1.2
Mus musculus	RefSeq	ILMN_218173	ILMN_218173	SPEER4F	NM_027609.1	NM_027609.1		70935	13386241	NM_027609.1	Speer4f	NP_081885.1	ILMN_2842348	007550598	S	981	CAACGCCTCTTGGCAAAGAACTGAGCTGGCTGCACTGCTATCAAGTGTCC	5	+	16992509-16992558	5qA3	Mus musculus spermatogenesis associated glutamate (E)-rich protein 4f (Speer4f), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SPEER-4F; MGC151280; MGC151278; 4922502J04Rik	SPEER-4F; MGC151280; MGC151278; 4922502J04Rik
Mus musculus	Riken	ILMN_206393	ILMN_206393	A530082L16RIK	ri|A530082L16|PX00143A10|AK080217|2524					AK080217	A530082L16Rik		ILMN_1250557	004610242	S	2263	CTTGCTGCTTCTAGAGGACCCAGGCTTAGTTCTGACATCCATACGGTGGC										
Mus musculus	RefSeq	ILMN_197479	ILMN_197479	LOC381436	XM_358579.1	XM_358579.1			38076173	XM_358579.1	LOC381436		ILMN_1233690	004150167	S	465	ACAACCATTTTAACGCCGTTGGCGCTGCTGCGCGGCGGTTTCTCGGGCTC										
Mus musculus	MEEBO	ILMN_218097	ILMN_218097	IL17D	scl46240.7.1_3				22003885	NM_145837	Il17d		ILMN_2691606	005130682	S	1056	CGAGCCGGACAAGTCCGCGGACAGTGCGAACTCCAGCATGGACAAGCTGC										
Mus musculus	MEEBO	ILMN_185814	ILMN_185814	LATS1	scl39168.10_178						Lats1		ILMN_2430229	000770634	S	19	TCGACCCTGTTGATCCTGATAAATTGTGGAGCGATGGCAGCGAGGAGGAA							Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197087	ILMN_310378	LOC544884	XR_030716.1	XR_030716.1		544884	149274407	XR_030716.1	LOC544884		ILMN_2526866	006550646	S	316	CAGAAGTGGTCAGAATTGATCGCCAAAATCCCAGATTTTTGGGTAACAAC				12qD3	PREDICTED: Mus musculus similar to protein phosphatase 2A inhibitor-2 I-2PP2A (LOC544884), misc RNA.					
Mus musculus	RefSeq	ILMN_237220	ILMN_237220	GMFG	NM_001039192.1	NM_001039192.1		63986	85861221	NM_001039192.1	Gmfg	NP_001034281.1	ILMN_3152663	007320747	A	695	TCCAACTTTGGCCGGGAGGGGGCGGACGTTTCCAGCGAAACCAAGCTGGT	7	+	29231626-29231675	7qA3	Mus musculus glia maturation factor, gamma (Gmfg), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AI324845; 0610039G16Rik; 2310057N07Rik	AI324845; 0610039G16Rik; 2310057N07Rik
Mus musculus	RefSeq	ILMN_219263	ILMN_219263	A430005L14RIK	NM_175287.2	NM_175287.2		97159	31341526	NM_175287.2	A430005L14Rik	NP_780496.1	ILMN_2800881	000540100	S	828	TGAGAACAAGGTGGACATCAGTGTCACTGGCTGGCACAGACGCCCAGGCG	4	+	152805455-152805504	4qE2	Mus musculus RIKEN cDNA A430005L14 gene (A430005L14Rik), mRNA.				C79672	C79672
Mus musculus	RefSeq	ILMN_198812	ILMN_311250	LOC100043821	XM_001481017.1	XM_001481017.1		100043821	149265864	XM_001481017.1	LOC100043821	XP_001481067.1	ILMN_1226111	003930093	S	965	GCCTACATGGCTGTTTTTTCTTCCTCTGGTATTCCTAGAGCTGCAAGAGG	14	-	114822406-114822455	14qE4	PREDICTED: Mus musculus hypothetical protein LOC100043821 (LOC100043821), mRNA.					
Mus musculus	RefSeq	ILMN_193383	ILMN_311250	LOC100043821	XM_001481017.1	XM_001481017.1		100043821	149265864	XM_001481017.1	LOC100043821	XP_001481067.1	ILMN_2496644	004220095	S	382	AATTCAAGACAGTCTATCAGAAGTAAAGTGGAAAATAGCTTTATAAGGTA	14	-	114822989-114823038	14qE4	PREDICTED: Mus musculus hypothetical protein LOC100043821 (LOC100043821), mRNA.					
Mus musculus	RefSeq	ILMN_196585	ILMN_311250	LOC100043821	XM_001481017.1	XM_001481017.1		100043821	149265864	XM_001481017.1	LOC100043821	XP_001481067.1	ILMN_1257107	000650307	S	224	CCAGAACCAGAACTGCGGGTCGCGGTAATAAAGGTTCCCGTAAAGCAGAC	14	-	114823147-114823196	14qE4	PREDICTED: Mus musculus hypothetical protein LOC100043821 (LOC100043821), mRNA.					
Mus musculus	RefSeq	ILMN_222610	ILMN_222610	OLFR282	NM_146457.2	NM_146457.2		258449	125719160	NM_146457.2	Olfr282	NP_666668.2	ILMN_2752262	004220278	S	647	TTCTCCTATGCCCGCATTGTCTCCGCCATCTTGAGCATCAGTTCCACCAC	15	+	98268547-98268596	15qF1	Mus musculus olfactory receptor 282 (Olfr282), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR160-2	MOR160-2
Mus musculus	RefSeq	ILMN_222177	ILMN_222177	POMC	NM_008895.3	NM_008895.3		18976	142346465	NM_008895.3	Pomc	NP_032921.1	ILMN_2745802	002140598	S	213	ATAGATGTGTGGAGCTGGTGCCTGGAGAGCAGCCAGTGCCAGGACCTCAC	12	+	3958192-3958241	12qA1.1	Mus musculus pro-opiomelanocortin-alpha (Pomc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IGI]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IDA]	Pomc-1; alphaMSH; ACTH; beta-MSH; alpha-MSH; POMC; gamma-MSH	Pomc-1; alphaMSH; ACTH; beta-MSH; alpha-MSH; POMC; gamma-MSH
Mus musculus	Riken	ILMN_203989	ILMN_203989	PAX1	ri|A630019K16|PX00144G01|AK041531|1458					AK041531	Pax1		ILMN_2561517	001780209	S	1317	TGGATGTGCATTCAGTGACCCTTTGACAAAAAGTGGAGCAGGCTGTTGAG						Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell [goid 43367] [evidence IMP]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell [goid 43374] [evidence IMP]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]		
Mus musculus	RefSeq	ILMN_186460	ILMN_246441	SLC32A1	NM_009508.2	NM_009508.2		22348	125490379	NM_009508.2	Slc32a1	NP_033534.2	ILMN_1234039	005050064	S	2628	GCCGGTTTTCAGGAACCCAAACTCATCTTGTGCAATGTATCCGGTCGTGG	2	+	158441306-158441355	2qH1	Mus musculus solute carrier family 32 (GABA vesicular transporter), member 1 (Slc32a1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A synapse in which an action potential in the presynaptic cell reduces the probability of an action potential occurring in the postsynaptic cell [goid 60077] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of glycine, aminoethanoic acid, into, out of, within or between cells [goid 15816] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of glycine from one side of a membrane to the other. Glycine is aminoethanoic acid [goid 15187] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + H+(out) = gamma-aminobutyric acid(in) + H+(in) [goid 15495] [evidence IDA]	Viaat; R75019; VGAT	Viaat; R75019; VGAT
Mus musculus	RefSeq	ILMN_200181	ILMN_200181	LOC385651	XM_358846.1	XM_358846.1			38080824	XM_358846.1	LOC385651		ILMN_1218030	005910369	S	1759	CGAGTCTCAGGTTCATCTGTATGGGGGCTTCTGCTGCCTGGCTACCTCAC										
Mus musculus	Riken	ILMN_202315	ILMN_202315	4833409J19RIK	ri|4833409J19|PX00028I19|AK014671|1340					AK014671	4833409J19Rik		ILMN_1231982	001770431	S	501	GAGAGACATAGCATCCAAGTGCCAGGTACAACCAGCATCCTGCCTTCCTT										
Mus musculus	RefSeq	ILMN_218376	ILMN_218376	KRTAP5-2	NM_027844.1	NM_027844.1		71623	13386261	NM_027844.1	Krtap5-2	NP_082120.1	ILMN_2800530	002510161	S	745	GCCCTTGATGGGAAGGAGCAAATCACTGCCCTGATGCTTTCCTGACAGGC	7	-	141984067-141984116	7qF5	Mus musculus keratin associated protein 5-2 (Krtap5-2), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			4833428E21Rik	4833428E21Rik
Mus musculus	Riken	ILMN_202463	ILMN_202463	4930596A03RIK	ri|4930596A03|PX00037E03|AK016397|1532					AK016397	4930596A03Rik		ILMN_2549807	002680240	S	1394	CATGCACTTTGCAAGGGAGTTTAGATATAACCGTGTCCTAAGCTTTGTGG										
Mus musculus	MEEBO	ILMN_187100	ILMN_187100	MYH10	scl40051.1.1_3				33598963	NM_175260	Myh10		ILMN_1234018	002060670	S	14	CCAAAAATACGAGAAGCAAACGGGCCTGGCAGAGAAGACCAGAGAGCGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IMP]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISO]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence ISO]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence IMP]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The directed movement of the nucleus [goid 7097] [evidence IMP]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IMP]; The formation of a cell surface protrusion, such as a lamellipodium or filopodium, at the leading edge of a migrating cell [goid 6930] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the lateral ventricles over time, from the formation to the mature structure. The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle [goid 21670] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The process whose specific outcome is the progression of the lateral ventricles over time, from the formation to the mature structure. The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle [goid 21670] [evidence IMP]; The process whose specific outcome is the progression of the fourth ventricle over time, from its formation to the mature structure. The fourth ventricle is an irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space [goid 21592] [evidence IMP]; The process whose specific outcome is the progression of the third ventricle over time, from its formation to the mature structure. The third ventricle is the narrow cleft inferior to the corpus callosum, within the diencephalon, between the paired thalami. Its floor is formed by the hypothalamus, its anterior wall by the lamina terminalis, and its roof by ependyma, and it communicates with the fourth ventricle by the cerebral aqueduct, and with the lateral ventricles by the interventricular foramina [goid 21678] [evidence IMP]; The process whose specific outcome is the progression of a ventricular cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55015] [evidence IMP]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IMP]; The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21680] [evidence IMP]; The process whose specific outcome is the progression of the fourth ventricle over time, from its formation to the mature structure. The fourth ventricle is an irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space [goid 21592] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISO]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of an actin filament to accelerate release of ADP and phosphate [goid 30898] [evidence ISO]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence ISO]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ADP, adenosine 5'-diphosphate [goid 43531] [evidence ISO]		
Mus musculus	RefSeq	ILMN_209600	ILMN_209600	BC030476	NM_173421.1	NM_173421.1		239368	27734135	NM_173421.1	BC030476	NP_775597.1	ILMN_2819380	001780037	S	1980	GGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTGCA	15	+	34403251-34403300	15qB3.1	Mus musculus cDNA sequence BC030476 (BC030476), mRNA.				MGC117582; MGC40815	MGC117582; MGC40815
Mus musculus	RefSeq	ILMN_209600	ILMN_209600	BC030476	NM_173421.1	NM_173421.1		239368	27734135	NM_173421.1	BC030476	NP_775597.1	ILMN_2597343	003890020	S	1794	GTGTCTAGAGAGAGGAACTAGCAAACTTTAAGGAACTCATGATAAGAGAG	15	+	34403065-34403114	15qB3.1	Mus musculus cDNA sequence BC030476 (BC030476), mRNA.				MGC117582; MGC40815	MGC117582; MGC40815
Mus musculus	MEEBO	ILMN_195481	ILMN_195481	IGH-4	scl0016017.1_1						Igh-4		ILMN_2515956	005960402	S	9	GCAAGCTCAATGTGCAGAAGAGCAACTGGGAGGCAGGAAATACTTTCACC										
Mus musculus	Riken	ILMN_203476	ILMN_203476	6430526J12RIK	ri|6430526J12|PX00046C13|AK032360|3267					AK032360	6430526J12Rik		ILMN_2557585	000510598	S	2773	CCCTTGCGTCCTGGGTCTGTAGTGTGTGGCTGAACATCCTTGGCTTACTC										
Mus musculus	RefSeq	ILMN_211770	ILMN_211770	NCKIPSD	NM_030729.4	NM_030729.4		80987	133892390	NM_030729.4	Nckipsd	NP_109654.2	ILMN_2619380	004670121	S	2294	GAACTCAGGGGCTTGGCTCTAAGGATGTTCTGCACCGACACTGCGAGGTG	9	+	108720121-108720170	9qF2	Mus musculus NCK interacting protein with SH3 domain (Nckipsd), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	WISH; AF3P21; SPIN90; DIP1; Wasbp; ORF1; WASLBP	WISH; AF3P21; SPIN90; DIP1; Wasbp; ORF1; WASLBP
Mus musculus	RefSeq	ILMN_211890	ILMN_241850	E130119H09RIK	XR_005138.1	XR_005138.1		78550	94394997	XR_005138.1	E130119H09Rik		ILMN_1250044	002360192	S	649	GCCTCAAGCCTGAAATCCTTTTATAAGGAGAACGATAGACCAGTTCTGTC				13qB1	PREDICTED: Mus musculus RIKEN cDNA E130119H09 gene (E130119H09Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_193329	ILMN_228984	RAPGEF1	NM_054050.2	NM_054050.2		107746	84875507	NM_054050.2	Rapgef1	NP_473391.1	ILMN_1226718	007650053	S	504	CAGAGGGCTACCCTATCCCCTTGGATCTGGAGCAGCAGGCAGTAGAATTT	2	+	29535279-29535328	2qB	Mus musculus Rap guanine nucleotide exchange factor (GEF) 1 (Rapgef1), transcript variant 3, mRNA.		The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IDA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence TAS]	C3G; 4932418O06Rik; Grf2	C3G; 4932418O06Rik; Grf2
Mus musculus	RefSeq	ILMN_212280	ILMN_212280	CHCHD4	NM_133928.2	NM_133928.2		72170	118129894	NM_133928.2	Chchd4	NP_598689.1	ILMN_2624695	005570646	S	946	GCTTGCTGGAGTACATGGGGCTGCTGCCTCGTTCCCGACAGCTAATTGTC	6	-	91414519-91414568	6qD1	Mus musculus coiled-coil-helix-coiled-coil-helix domain containing 4 (Chchd4), nuclear gene encoding mitochondrial protein, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810014D17Rik; 2410012P20Rik; AI838740	2810014D17Rik; 2410012P20Rik; AI838740
Mus musculus	Riken	ILMN_203439	ILMN_203439	PMX2B	ri|D530038E02|PX00089K24|AK052579|1177					AK052579	Pmx2b		ILMN_1251596	006020292	S	997	GGGAGCAAAGGTGCTTTCTGGAGCTGGTCCCCCTAGCTGGGTATAAGGTC										
Mus musculus	Riken	ILMN_202001	ILMN_202001	GNG12	ri|1600029K01|ZX00042P15|AK005561|748					AK005561	Gng12		ILMN_2546272	003440243	S	508	CCCTTCTCTCGGAATAATAGACCCTGAAGTCTCTCTTTTTCAAGTTGTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222235	ILMN_222235	NLN	NM_029447.2	NM_029447.2		75805	148540128	NM_029447.2	Nln	NP_083723.1	ILMN_2746695	002570136	S	302	CAGATGGGACCTTTCTCCAGAGCAGATCAGGACGAGGACAGAGGAGCTCA				13qD1	Mus musculus neurolysin (metallopeptidase M3 family) (Nln), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	C79345; 4930472G13Rik	C79345; 4930472G13Rik
Mus musculus	RefSeq	ILMN_221119	ILMN_221119	NMUR2	NM_153079.4	NM_153079.4		216749	146149133	NM_153079.4	Nmur2	NP_694719.2	ILMN_1255537	001710670	S	3094	GCCACTTGGAACCTAGATCTTAAAAGGCTTCATAGAACACCACTTATTCG				11qB1.3	Mus musculus neuromedin U receptor 2 (Nmur2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The specific actions of an organism that are triggered by the detection of dietary excess and result in a decreased intake of food [goid 2023] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with neuromedin U to initiate a change in cell activity [goid 1607] [evidence IEA]; Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [evidence IPI]	Nmu2r	Nmu2r
Mus musculus	Riken	ILMN_205783	ILMN_205783	D230017B08RIK	ri|D230017B08|PX00188J17|AK051900|1932					AK051900	D230017B08Rik		ILMN_1231483	006560082	S	1540	CCCTCGATGACCCACTTTTGGAGTCAGCCTCTTATGAGCCACCTACTCCG										
Mus musculus	MEEBO	ILMN_189290	ILMN_189290	C330013E15RIK	scl46719.2.1_10						C330013E15Rik		ILMN_1243895	005720091	S	20	TAACAGTTTGCGTGGCGTCCTGTAAATGCAGTTTCGTCCAGTCGGCAAGC										
Mus musculus	Riken	ILMN_202189	ILMN_202189	1700052N19RIK	ri|1700052N19|ZX00075I15|AK006776|948					AK006776	1700052N19Rik		ILMN_1253228	006040735	S	520	GCACCCTTGGAGTAGAGGTGTGGCTTCCCAACTCACTGCTGCTCAGAAGG										
Mus musculus	RefSeq	ILMN_197717	ILMN_197717	LOC329698	XM_287247.1	XM_287247.1			28491912	XM_287247.1	LOC329698		ILMN_2529122	006420717	S	473	AAAGCAGACACAACCCACCCTAGGCCCGTGGTTTCCCTGCAAGAAGCCCA										
Mus musculus	RefSeq	ILMN_212586	ILMN_254874	1700066M21RIK	XM_907648.3	XM_907648.3		73467	149234005	XM_907648.3	1700066M21Rik	XP_912741.1	ILMN_2628149	004230338	S	260	TGACATCCCGGGAAGGAGATTCCCCGGAGCAGCGGCACCACGTCCTCTAC				1qC1.3	PREDICTED: Mus musculus RIKEN cDNA 1700066M21 gene (1700066M21Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_210066	ILMN_210066	BRD4	NM_020508.2	NM_020508.2		57261	31560787	NM_020508.2	Brd4	NP_065254.2	ILMN_1228785	006510022	S	3799	TGAGATGAAGCCTGTAGACATAGGGAGGCCTGTGATCCGGCCTCCAGAGC	17	-	32335704-32335753	17qB1	Mus musculus bromodomain containing 4 (Brd4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IPI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Brd5; WI-11513; HUNK1; MCAP	Brd5; WI-11513; HUNK1; MCAP
Mus musculus	RefSeq	ILMN_210066	ILMN_210066	BRD4	NM_020508.2	NM_020508.2		57261	31560787	NM_020508.2	Brd4	NP_065254.2	ILMN_2627582	006380682	S	3936	TTAAGAACATGGGCTCCTGGGCCAGCCTGGTACAGAAGCATCCGACCACC	17	-	32335447-32335496	17qB1	Mus musculus bromodomain containing 4 (Brd4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IPI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Brd5; WI-11513; HUNK1; MCAP	Brd5; WI-11513; HUNK1; MCAP
Mus musculus	RefSeq	ILMN_210066	ILMN_210066	BRD4	NM_020508.2	NM_020508.2		57261	31560787	NM_020508.2	Brd4	NP_065254.2	ILMN_2601877	004050634	S	4651	ACATGCCACCCCCTCAGAGGACGTCAGTTCAGGGCACGTCTCAATATGAG	17	-	32334440-32334489	17qB1	Mus musculus bromodomain containing 4 (Brd4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IPI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Brd5; WI-11513; HUNK1; MCAP	Brd5; WI-11513; HUNK1; MCAP
Mus musculus	RefSeq	ILMN_210066	ILMN_210066	BRD4	NM_020508.2	NM_020508.2		57261	31560787	NM_020508.2	Brd4	NP_065254.2	ILMN_1239049	003830035	S	2685	CAGGCAGTGTCTTTGACCCTATTGGCCACTTCACCCAGCCCATCTTGCAC	17	-	32339212-32339261	17qB1	Mus musculus bromodomain containing 4 (Brd4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IPI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Brd5; WI-11513; HUNK1; MCAP	Brd5; WI-11513; HUNK1; MCAP
Mus musculus	RefSeq	ILMN_210066	ILMN_210066	BRD4	NM_020508.2	NM_020508.2		57261	31560787	NM_020508.2	Brd4	NP_065254.2	ILMN_1258717	000730040	S	2830	TTTGCACAATGCGCTGCCCCAACAGCCATCTCGGCCCAGTAACCGAGCTG	17	-	32338486-32338535	17qB1	Mus musculus bromodomain containing 4 (Brd4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IPI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Brd5; WI-11513; HUNK1; MCAP	Brd5; WI-11513; HUNK1; MCAP
Mus musculus	RefSeq	ILMN_210066	ILMN_210066	BRD4	NM_020508.2	NM_020508.2		57261	31560787	NM_020508.2	Brd4	NP_065254.2	ILMN_2633333	004050326	S	5760	CCCCTGGTGAGGTTACATGTGCCATGAGAACCCACTCTACACCATAGTGC	17	-	32333331-32333380	17qB1	Mus musculus bromodomain containing 4 (Brd4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IPI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Brd5; WI-11513; HUNK1; MCAP	Brd5; WI-11513; HUNK1; MCAP
Mus musculus	RefSeq	ILMN_210066	ILMN_210066	BRD4	NM_020508.2	NM_020508.2		57261	31560787	NM_020508.2	Brd4	NP_065254.2	ILMN_1240444	006290520	S	4312	TATGCTGGACCAGCAGAGGGAGTTGGCCCGGAAACGAGAGCAGGAGCGGA	17	-	32334989-32335038	17qB1	Mus musculus bromodomain containing 4 (Brd4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IPI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Brd5; WI-11513; HUNK1; MCAP	Brd5; WI-11513; HUNK1; MCAP
Mus musculus	MEEBO	ILMN_187034	ILMN_187034	TLR5	scl17112.5.1_35	NM_016928.1			8394451	NM_016928.1	Tlr5		ILMN_2440602	002100468	S	17	GCACGGGACCTCTCAACCTGGCATTCATGCCCTTTCACGACTTAGCACCG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209172	ILMN_209172	OLFR1006	NM_146570.2	NM_146570.2		258563	112983508	NM_146570.2	Olfr1006	NP_666781.2	ILMN_1232711	005890647	S	455	TGTCATCTTCTCTCTGTACTGGGCTAGTAGCTGGGTGTTACATAGGGGGG	2	-	85514850-85514899	2qD	Mus musculus olfactory receptor 1006 (Olfr1006), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR213-4	MOR213-4
Mus musculus	RefSeq	ILMN_210376	ILMN_210376	NDUFB9	NM_023172.3	NM_023172.3		66218	142349573	NM_023172.3	Ndufb9	NP_075661.1	ILMN_2605004	004860187	S	369	TGTATCCTGATTACTTTTCCAAGAGAGAGCAGTGGAAGAAGCTGAGGATG	15	+	58768953-58769002	15qD1	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9 (Ndufb9), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		1190008J14Rik	1190008J14Rik
Mus musculus	RefSeq	ILMN_211922	ILMN_211922	BHLHB2	NM_011498.4	NM_011498.4		20893	146134431	NM_011498.4	Bhlhb2	NP_035628.1	ILMN_1249378	001230341	S	2826	CTAGGGAGAGGCGAGGTTACAGTGTTTATATTTTGGAACCTTCCTGAAGG				6qE2	Mus musculus basic helix-loop-helix domain containing, class B2 (Bhlhb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Clast5; Stra14; Dec1; Stra13; C130042M06Rik; CR8; Sharp2	Clast5; Stra14; Dec1; Stra13; C130042M06Rik; CR8; Sharp2
Mus musculus	RefSeq	ILMN_190506	ILMN_234856	CAMK2N2	XM_990809.1	XM_990809.1		73047	94400097	XM_990809.1	Camk2n2	XP_995903.1	ILMN_1241161	003170719	S	1153	CAGTACCTTTGGATGACACCTGTGGACCGGAAGATGTTCTCAACCCAGGG	16	-	20619367-20619416	16qB1	PREDICTED: Mus musculus calcium/calmodulin-dependent protein kinase II inhibitor 2 (Camk2n2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217802	ILMN_313999	LOC545866	XR_034732.1	XR_034732.1		545866	149255380	XR_034732.1	LOC545866		ILMN_1230060	001410131	S	1051	CCTGGTGCCCCTGATGATGAAGCAGTACGGATATTTTTAGAATTTGAGAG	6	-	92514734-92514783	6qD1	PREDICTED: Mus musculus similar to 45kDa splicing factor; SPF 45 (LOC545866), misc RNA.					
Mus musculus	RefSeq	ILMN_218568	ILMN_218568	2410004A20RIK	NM_025890.2	NM_025890.2		66991	118130253	NM_025890.2	2410004A20Rik	NP_080166.1	ILMN_1239178	003870717	S	1411	CTGCAAATCCAGAACCTAAAGGCAGGGGTTAGCTTGGGCTGAGTAAGGCA	9	+	72952038-72952087	9qD	Mus musculus RIKEN cDNA 2410004A20 gene (2410004A20Rik), mRNA.				AI467128; ECAT1	AI467128; ECAT1
Mus musculus	RefSeq	ILMN_213598	ILMN_213598	3300001P08RIK	NM_026313.1	NM_026313.1		67684	23956165	NM_026313.1	3300001P08Rik	NP_080589.1	ILMN_2798797	005570541	S	3132	GTGGCTTGCTCAGTGTTTACTTGCAAGTTTTCAGTCTTGGACTTTGAAGC	11	-	94152567-94152616	11qD	Mus musculus RIKEN cDNA 3300001P08 gene (3300001P08Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Luc7a; RP23-244C22.4	Luc7a; RP23-244C22.4
Mus musculus	RefSeq	ILMN_213598	ILMN_213598	3300001P08RIK	NM_026313.1	NM_026313.1		67684	23956165	NM_026313.1	3300001P08Rik	NP_080589.1	ILMN_2638778	005560209	S	703	GTGTGTGGAGCCTTTTTGATAGTAGGAGACGCCCAGTCCCGAGTAGATGA	11	-	94159136-94159185	11qD	Mus musculus RIKEN cDNA 3300001P08 gene (3300001P08Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Luc7a; RP23-244C22.4	Luc7a; RP23-244C22.4
Mus musculus	RefSeq	ILMN_213598	ILMN_213598	3300001P08RIK	NM_026313.1	NM_026313.1		67684	23956165	NM_026313.1	3300001P08Rik	NP_080589.1	ILMN_2727004	005700343	S	3153	TGCAAGTTTTCAGTCTTGGACTTTGAAGCCAGGATTCCACGTTAGTGCTC	11	-	94152546-94152595	11qD	Mus musculus RIKEN cDNA 3300001P08 gene (3300001P08Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Luc7a; RP23-244C22.4	Luc7a; RP23-244C22.4
Mus musculus	RefSeq	ILMN_246486	ILMN_246486	OLFR1215	NM_146459.1	NM_146459.1		258451	33239023	NM_146459.1	Olfr1215	NP_666670.1	ILMN_2843958	006770220	S	314	TCTTCAGTGCTGTGGAGGTGATCATTCTGGCAGCTATGGCTTATGACCGG	2	-	88842080-88842129	2qE1	Mus musculus olfactory receptor 1215 (Olfr1215), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR233-13; MGC157523	MOR233-13; MGC157523
Mus musculus	MEEBO	ILMN_224260	ILMN_224260	IL1B	scl18674.7.1_35				31560681	NM_008361	Il1b		ILMN_2777498	003420754	S	863	ATCCGTGTCTTCCTAAAGTATGGGCTGGACTGTTTCTAATGCCTTCCCCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]	Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IGI]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus [goid 42221] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IDA]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_195206	ILMN_238018	SCUBE1	NM_022723.2	NM_022723.2		64706	103472028	NM_022723.2	Scube1	NP_073560.2	ILMN_2755815	003890048	S	5052	GGCGGCAATATTCAAACCAGAGACCCTGGGCATCGGTGTAGCCAGTCTGA	15	-	83435735-83435784	15qE1-qE2	Mus musculus signal peptide, CUB domain, EGF-like 1 (Scube1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI604862; A630023E24Rik; 7330410C13Rik	AI604862; A630023E24Rik; 7330410C13Rik
Mus musculus	RefSeq	ILMN_198624	ILMN_198624	LOC212744	XM_141978.4	XM_141978.4			38086516	XM_141978.4	LOC212744		ILMN_2532347	000840687	S	1001	GTATGTCATCAAGTAAGCCTCGTAGGAAACGCCGTAGGGCTGACCCACAG										
Mus musculus	RefSeq	ILMN_221108	ILMN_221108	LGALS8	NM_018886.3	NM_018886.3		56048	141803486	NM_018886.3	Lgals8	NP_061374.1	ILMN_1221288	006560326	S	2024	GCAAACCCAGGGGCGTAGTGTGAAAGGCTTAGTTGGTGTGGAGACTAGCC	13	-	12532269-12532318	13qA1	Mus musculus lectin, galactose binding, soluble 8 (Lgals8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Lgals-8; 1200015E08Rik; D13Ertd524e; AI326142	Lgals-8; 1200015E08Rik; D13Ertd524e; AI326142
Mus musculus	RefSeq	ILMN_187022	ILMN_226297	ARNT	NM_009709.3	NM_009709.3		11863	142379121	NM_009709.3	Arnt	NP_033839.2	ILMN_2728802	007510711	S	2281	CCAGTGAGCAGCATGTTCAGCAGACACAAGCACAAGCACCTAGCCAGCCT	3	+	95298474-95298523	3qF2.1	Mus musculus aryl hydrocarbon receptor nuclear translocator (Arnt), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]	W08714; mKIAA4051; Hif1b; ESTM42; Drnt; D3Ertd557e; KIAA4051	W08714; mKIAA4051; Hif1b; ESTM42; Drnt; D3Ertd557e; KIAA4051
Mus musculus	RefSeq	ILMN_187022	ILMN_226297	ARNT	NM_009709.3	NM_009709.3		11863	142379121	NM_009709.3	Arnt	NP_033839.2	ILMN_2607563	006200014	S	2351	GTCCATGCTGGGAGACCAAAGCAACACCTACAACAATGAAGAATTTCCTG	3	+	95299234-95299283	3qF2.1	Mus musculus aryl hydrocarbon receptor nuclear translocator (Arnt), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]	W08714; mKIAA4051; Hif1b; ESTM42; Drnt; D3Ertd557e; KIAA4051	W08714; mKIAA4051; Hif1b; ESTM42; Drnt; D3Ertd557e; KIAA4051
Mus musculus	RefSeq	ILMN_238517	ILMN_238517	CCDC27	NM_001033455.2	NM_001033455.2		381580	141802895	NM_001033455.2	Ccdc27	NP_001028627.1	ILMN_3163241	006250609	A	1436	CCGGGAACGGAAGCAGCAGATACAAGACATGACAGACAAGTTCTCCAACC	4	-	153407448-153407458:153409859-153409897	4qE2	Mus musculus coiled-coil domain containing 27 (Ccdc27), mRNA.				Gm1035	Gm1035
Mus musculus	RefSeq	ILMN_200064	ILMN_200064	LOC385673	XM_358902.1	XM_358902.1			38080186	XM_358902.1	LOC385673		ILMN_2537466	005220431	S	491	GGCGGACTTTCTGTCCAGAGTTTTGGAGAGAGGCCTTGAATAGACACTGC										
Mus musculus	RefSeq	ILMN_222389	ILMN_222389	GSDMDC1	NM_026960.3	NM_026960.3		69146	146141204	NM_026960.3	Gsdmdc1	NP_081236.1	ILMN_2752790	000060390	S	491	CCAGTGCCTCCATGAATGTGTGTATACTGCGTGTGACTCAGAAGACCTGG				15qD3	Mus musculus gasdermin domain containing 1 (Gsdmdc1), mRNA.				M2-4; AW558049; DF5L; Dfna5l; Gsdmd; 1810036L03Rik	M2-4; AW558049; DF5L; Dfna5l; Gsdmd; 1810036L03Rik
Mus musculus	RefSeq	ILMN_222389	ILMN_222389	GSDMDC1	NM_026960.3	NM_026960.3		69146	146141204	NM_026960.3	Gsdmdc1	NP_081236.1	ILMN_2748928	007570204	S	1509	AGAATCCCCCCAGGTGCACTGGGAACCAACGTCTCTGATCCCCACAAGTG				15qD3	Mus musculus gasdermin domain containing 1 (Gsdmdc1), mRNA.				M2-4; AW558049; DF5L; Dfna5l; Gsdmd; 1810036L03Rik	M2-4; AW558049; DF5L; Dfna5l; Gsdmd; 1810036L03Rik
Mus musculus	Riken	ILMN_203657	ILMN_203657	9430001M03RIK	ri|9430001M03|PX00108M07|AK034531|1886					AK034531	9430001M03Rik		ILMN_1217304	002760402	S	1565	CCCATGACTCTTTCTGGGTAGAACGACTGTAGACATGTGTGGAGCCTTAG										
Mus musculus	RefSeq	ILMN_201487	ILMN_201487	LOC385249	XM_358145.1	XM_358145.1			38094437	XM_358145.1	LOC385249		ILMN_1253777	004540678	S	23	ACTCAGGCTTCAGCAGTGGCCTTGATCTGGGAGCTTGTGACCAAGCCCAG										
Mus musculus	RefSeq	ILMN_216273	ILMN_216273	2810441K11RIK	NM_026798.1	NM_026798.1		68642	21312085	NM_026798.1	2810441K11Rik	NP_081074.1	ILMN_2799217	001990048	S	822	GGCCAGAGCACCTTGTGTGGACCTTCTAGTTTTGTTTGGCTTCCAGCAGA	19	-	10625182-10625231	19qA	Mus musculus RIKEN cDNA 2810441K11 gene (2810441K11Rik), mRNA.				4921533J23Rik; 1110017C22Rik; AI482550; A930021F15Rik	4921533J23Rik; 1110017C22Rik; AI482550; A930021F15Rik
Mus musculus	MEEBO	ILMN_221497	ILMN_221497	LBX1H	scl52428.1_1	NM_010691.2			28916699	NM_010691.2	Lbx1h		ILMN_2736399	006620435	S	2336	AGATTTCGATGTTTTCAAAGCCCGGGTGCTGCCGGGTCGGCTGACGGTGA										
Mus musculus	RefSeq	ILMN_211628	ILMN_211628	PPP3CC	NM_008915.2	NM_008915.2		19057	118130628	NM_008915.2	Ppp3cc	NP_032941.1	ILMN_2617820	004590470	S	1674	ATCATGATGCAGGGAGGATGCACTCACACTCGCATCCGCCACACCCACAG	14	-	70617929-70617978	14qD2	Mus musculus protein phosphatase 3, catalytic subunit, gamma isoform (Ppp3cc), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Calnc	Calnc
Mus musculus	RefSeq	ILMN_254715	ILMN_254715	OLFR761	NM_001011829.1	NM_001011829.1		258094	58801421	NM_001011829.1	Olfr761	NP_001011829.1	ILMN_2818901	000430189	S	312	TGCATCTTTTGCCTGGGGAGAGCTGGGCACTCTCACAGTGATGTCTTATG	17	-	38089606-38089655	17qB1	Mus musculus olfactory receptor 761 (Olfr761), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR218-5P; MOR218-12	MOR218-5P; MOR218-12
Mus musculus	RefSeq	ILMN_256885	ILMN_256885	COL28A1	NM_001037865.1	NM_001037865.1		213945	83745130	NM_001037865.1	Col28a1	NP_001032954.1	ILMN_3161091	000270201	S	3851	TGCCCACACCGTTCCAGCACCTTCACAACCCATCAGTGGAGAGTGGTTTG	6	-	7948137-7948186	6qA1	Mus musculus collagen, type XXVIII, alpha 1 (Col28a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Gm466; Col28	Gm466; Col28
Mus musculus	Riken	ILMN_205485	ILMN_205485	GTL1-13	ri|D030043E24|PX00180H07|AK050952|2670					AK050952	Gtl1-13		ILMN_2572919	007000671	S	2151	CTCATCCCAGCACTTGGAAGGCAAGGACAGGCCAATCTGAGTTTGAGGCC										
Mus musculus	RefSeq	ILMN_197297	ILMN_197297	LOC268694	XM_196106.1	XM_196106.1			25053167	XM_196106.1	LOC268694		ILMN_2527628	006480673	S	924	ACCTCAGATGGACTGTGCGACCCGTGGGAACTCCACAGTGAGCTAGCCAA										
Mus musculus	RefSeq	ILMN_251711	ILMN_251711	NEFM	NM_008691.2	NM_008691.2		18040	112363106	NM_008691.2	Nefm	NP_032717.2	ILMN_2938820	001820196	S	2725	CCCAGGGTGACTAAGATCGGAGTCCGTTGCAAAAGGTTAAGCCATACGAC	14	-	68738057-68738093:68738094-68738106	14qD1	Mus musculus neurofilament, medium polypeptide (Nefm), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter [goid 5883] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence IMP]; Any process that modulates the rate, direction or extent of axon growth such that the correct diameter is attained and maintained [goid 31133] [evidence IMP]; The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IMP]; The formation of the bundles of intermediate filaments, known as tonofilaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs [goid 45110] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	NF165; NF160; Nfm; NF-M; Nef3	NF165; NF160; Nfm; NF-M; Nef3
Mus musculus	RefSeq	ILMN_200485	ILMN_251445	TMEM120B	NM_001039723.2	NM_001039723.2		330189	105554532	NM_001039723.2	Tmem120b	NP_001034812.1	ILMN_1234799	006280653	S	992	CTGGCAGCTCTACAATGCCGTCACCCTGTTTGAGCTCTCCACCCATGAGG	5	+	123566213-123566262	5qF	Mus musculus transmembrane protein 120B (Tmem120b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_251445	ILMN_251445	TMEM120B	NM_001039723.2	NM_001039723.2		330189	105554532	NM_001039723.2	Tmem120b	NP_001034812.1	ILMN_2909283	003180195	S	1585	GGCTTTAGCCGACCTGCTACTTTACTGTGTCCCAGGCACCGGGAGGAATG	5	+	123567179-123567228	5qF	Mus musculus transmembrane protein 120B (Tmem120b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_210639	ILMN_210639	TRAFD1	NM_172275.1	NM_172275.1		231712	26986576	NM_172275.1	Trafd1	NP_758479.1	ILMN_2727799	003800068	S	1852	AACATGCTGGTGCAATGTCCAGCTGCCTCTCGGGCTTACTGGGCAGGAGA	5	-	121822262-121822311	5qF	Mus musculus TRAF type zinc finger domain containing 1 (Trafd1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fln29; 1110008K06Rik	Fln29; 1110008K06Rik
Mus musculus	RefSeq	ILMN_210639	ILMN_210639	TRAFD1	NM_172275.1	NM_172275.1		231712	26986576	NM_172275.1	Trafd1	NP_758479.1	ILMN_2833441	004570747	S	2295	ACTGCTTTGTTCATGCTGCCCCTACCAGGGCCACTCCTACTCATGAGGAC	5	-	121821819-121821868	5qF	Mus musculus TRAF type zinc finger domain containing 1 (Trafd1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fln29; 1110008K06Rik	Fln29; 1110008K06Rik
Mus musculus	RefSeq	ILMN_210639	ILMN_210639	TRAFD1	NM_172275.1	NM_172275.1		231712	26986576	NM_172275.1	Trafd1	NP_758479.1	ILMN_1223395	003440037	S	1580	AGCATCCGGGCACGCTCCAGTGATCCACTCTATTCAAAATCTCTATCCAG	5	-	121823198-121823247	5qF	Mus musculus TRAF type zinc finger domain containing 1 (Trafd1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fln29; 1110008K06Rik	Fln29; 1110008K06Rik
Mus musculus	MEEBO	ILMN_186667	ILMN_186667	2810423A18RIK	scl1566.1.1_41						2810423A18Rik		ILMN_2437470	000020440	S	18	CTGTAAGTCCGTACGCTCAGTAGTGATGTTCTGAAGGCTGATGATGGCAT										
Mus musculus	RefSeq	ILMN_222093	ILMN_222093	SLC17A5	NM_172773.2	NM_172773.2		235504	141801900	NM_172773.2	Slc17a5	NP_766361.1	ILMN_1216788	000160553	S	2813	CCTTTACCCTGCTTCCTGACCAGTGTCTCCCAGTGGTTAGGCACACTGTA	9	-	78384654-78384703	9qE1	Mus musculus solute carrier family 17 (anion/sugar transporter), member 5 (Slc17a5), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence ISO]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sialic acid into, out of, within or between cells [goid 15739] [evidence ISO]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of sialic acid from one side of the membrane to the other [goid 15136] [evidence ISO]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	SIASD; NSD; SLD; 4732491M05; SD; ISSD; AST; 4631416G20Rik; SIALIN	SIASD; NSD; SLD; 4732491M05; SD; ISSD; AST; 4631416G20Rik; SIALIN
Mus musculus	MEEBO	ILMN_188249	ILMN_188249	4931408A02RIK	scl48889.3.1_128				38080030	XM_354970	4931408A02Rik		ILMN_2587966	004280202	I	2209	CACAGTGTGGATGGAGGGAAGCAACTCCTTCAAGCTGCCCTCTGACCTTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188249	ILMN_188249	4931408A02RIK	scl48889.3.1_128				38080030	XM_354970	4931408A02Rik		ILMN_2451065	006330035	S	20	TGCCCCCATCCCTCAGGGAGCACGGTTCCCTTACTGGGCCCGCATCTTCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	Riken	ILMN_204163	ILMN_204163	HGD	ri|C730026B21|PX00087M07|AK050193|1300					AK050193	Hgd		ILMN_2562861	004780402	S	1199	TCCCGGTCACTGACAAAGTGACAGGCACCTTTGCTGTTGCTGTGGCTTGC							The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6572] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6570] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: homogentisate + O2 = 4-maleylacetoacetate [goid 4411] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220890	ILMN_220890	1700011E24RIK	XM_128789.5	XM_128789.5		75467	94402175	XM_128789.5	1700011E24Rik	XP_128789.3	ILMN_2728228	003780593	S	747	CCCCAAGCAGTCTTCAACCATTGCCAAAATGGGTAGAGAACACAGTCTCT	17	-	87788961-87789010	17qE4	PREDICTED: Mus musculus RIKEN cDNA 1700011E24 gene, transcript variant 2 (1700011E24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198656	ILMN_246390	LOC635086	XM_910030.2	XM_910030.2		635086	94408073	XM_910030.2	LOC635086	XP_915123.1	ILMN_1240356	002260187	S	674	AGGTTGCTGAGAGATGCTGAGAAGCAGGACTCTCTGCGTTGACTCCATCC					PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme E2 UbcH-ben (LOC635086), mRNA.					
Mus musculus	RefSeq	ILMN_211229	ILMN_211229	IRF7	NM_016850.2	NM_016850.2		54123	118130788	NM_016850.2	Irf7	NP_058546.1	ILMN_1227573	006590653	S	1469	TGGAGCGCAACCGCCACACCCCCATCTTCGACTTCAGCACTTTCTTCCGA	7	-	148449558-148449607	7qF5	Mus musculus interferon regulatory factor 7 (Irf7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_191692	ILMN_191692	ARID1B	scl50374.2_323				51769920	XM_139711	Arid1b		ILMN_1251442	003290719	S	11	GGTTCCTTTTGACTTCTGAACGTTAGTTTTGTGGAAAGTCTTTTGTGACG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218915	ILMN_218915	S100A13	NM_009113.3	NM_009113.3		20196	113930756	NM_009113.3	S100a13	NP_033139.1	ILMN_2987984	001990091	S	530	GGAGACTGATTGGAGAGCTGGCAAAGGAAGTCAGGAAGGAGAAGGCCCTG	3	+	90328351-90328400	3qF1	Mus musculus S100 calcium binding protein A13 (S100a13), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200312	ILMN_200312	LOC386199	XM_359116.1	XM_359116.1			38081284	XM_359116.1	LOC386199		ILMN_1233336	001230494	S	961	GACAAAACCAAGTTCACACAATATCTTTCCACGAATCCAGCCCTTCAAGG										
Mus musculus	Riken	ILMN_202042	ILMN_202042	ANXA6	ri|2810407D22|ZX00055B24|AK013026|2080					AK013026	Anxa6		ILMN_1241363	006860068	S	1727	CCTCCTGCCTGGGACGTGGCTAGTTTGAGTGACAGATGCTTAGATCAGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218478	ILMN_218478	SRF	NM_020493.2	NM_020493.2		20807	133892959	NM_020493.2	Srf	NP_065239.1	ILMN_1242533	006330437	S	1521	CCACAACTGTGGGTGGCCACATGATGTACCCTAGTCCCCATGCAGTGATG	17	-	46686899-46686948	17qC	Mus musculus serum response factor (Srf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence ISO]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	AW240594; AW049942	AW240594; AW049942
Mus musculus	RefSeq	ILMN_213384	ILMN_213384	NRXN1	NM_020252.2	NM_020252.2		18189	116875859	NM_020252.2	Nrxn1	NP_064648.2	ILMN_2750035	002810594	S	5204	TTGTGGCCTCGGCAGAGTGTCCCAGTGACGATGAGGACATTGACCCCTGT	17	-	90458837-90458886	17qE5	Mus musculus neurexin I (Nrxn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; The biosynthesis of a synapse [goid 7416] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA];  [goid 5246] [evidence IGI]	A230068P09Rik; 9330127H16Rik; 1700062G21Rik; mKIAA0578	A230068P09Rik; 9330127H16Rik; 1700062G21Rik; mKIAA0578
Mus musculus	RefSeq	ILMN_213384	ILMN_213384	NRXN1	NM_020252.2	NM_020252.2		18189	116875859	NM_020252.2	Nrxn1	NP_064648.2	ILMN_1239859	004560021	S	4797	CCTGGCGATTGCTAGACAGCGAATTCCATATCGACTTGGTCGAGTAGTTG	17	-	90563152-90563201	17qE5	Mus musculus neurexin I (Nrxn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; The biosynthesis of a synapse [goid 7416] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA];  [goid 5246] [evidence IGI]	A230068P09Rik; 9330127H16Rik; 1700062G21Rik; mKIAA0578	A230068P09Rik; 9330127H16Rik; 1700062G21Rik; mKIAA0578
Mus musculus	RefSeq	ILMN_202571	ILMN_213384	NRXN1	NM_020252.2	NM_020252.2		18189	116875859	NM_020252.2	Nrxn1	NP_064648.2	ILMN_2550623	003390097	S	666	CGGCGCGGTGCCAGCAGTAGGAGAGCAGAATCGGAAGAAACACACTTTTC	17	-	91488434-91488483	17qE5	Mus musculus neurexin I (Nrxn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; The biosynthesis of a synapse [goid 7416] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA];  [goid 5246] [evidence IGI]	A230068P09Rik; 9330127H16Rik; 1700062G21Rik; mKIAA0578	A230068P09Rik; 9330127H16Rik; 1700062G21Rik; mKIAA0578
Mus musculus	RefSeq	ILMN_213384	ILMN_213384	NRXN1	NM_020252.2	NM_020252.2		18189	116875859	NM_020252.2	Nrxn1	NP_064648.2	ILMN_2636528	006860026	S	4331	CATGTTCAAATCAAGGCGTTTGCTTGCAGCAATGGGATGGCTTCAGCTGT	17	-	90960123-90960172	17qE5	Mus musculus neurexin I (Nrxn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; The biosynthesis of a synapse [goid 7416] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA];  [goid 5246] [evidence IGI]	A230068P09Rik; 9330127H16Rik; 1700062G21Rik; mKIAA0578	A230068P09Rik; 9330127H16Rik; 1700062G21Rik; mKIAA0578
Mus musculus	MEEBO	ILMN_214441	ILMN_214441	D630005C06RIK	scl00320256.1_291				51765147	XM_486268	D630005C06Rik		ILMN_2648063	003850164	S	4801	GTGGGCGCATGCCCTCAGACACATCTCTTTCAACATATAAAGTCCCTCTG										
Mus musculus	RefSeq	ILMN_218109	ILMN_218109	OTX2	NM_144841.2	NM_144841.2		18424	66955882	NM_144841.2	Otx2	NP_659090.1	ILMN_2691752	007210367	S	1269	GGGCCTTAGAAGGGTCCATCAACCAGCAACCTGAAATGGACAAACCAATC	14	-	49278179-49278228	14qC1	Mus musculus orthodenticle homolog 2 (Drosophila) (Otx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into an eye photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments [goid 42706] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	E130306E05Rik	E130306E05Rik
Mus musculus	RefSeq	ILMN_217887	ILMN_217887	GCA	NM_145523.3	NM_145523.3		227960	142371963	NM_145523.3	Gca	NP_663498.1	ILMN_2688888	001820523	S	2773	TGCCAAATGGTTAAATGCCAGGTATTGCACTTCTAGTGTGAGTGGCAGTT	2	+	62531651-62531700	2qC1.3	Mus musculus grancalcin (Gca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI573844; 5133401E04Rik	AI573844; 5133401E04Rik
Mus musculus	RefSeq	ILMN_188645	ILMN_217887	GCA	NM_145523.3	NM_145523.3		227960	142371963	NM_145523.3	Gca	NP_663498.1	ILMN_1239940	001070563	S	2764	GATAATAGCTGAATTAATGCACCGTTGTTTGAACTGAGGCATCTCATTGC	2	+	62531642-62531691	2qC1.3	Mus musculus grancalcin (Gca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI573844; 5133401E04Rik	AI573844; 5133401E04Rik
Mus musculus	RefSeq	ILMN_217887	ILMN_217887	GCA	NM_145523.3	NM_145523.3		227960	142371963	NM_145523.3	Gca	NP_663498.1	ILMN_2733482	002510564	S	235	CCTGGGTTATTCTGACAGCTACTCCCCTGCCGACGACTCCATGTGGACTT	2	+	62510435-62510484	2qC1.3	Mus musculus grancalcin (Gca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI573844; 5133401E04Rik	AI573844; 5133401E04Rik
Mus musculus	RefSeq	ILMN_218054	ILMN_218054	CCT2	NM_007636.2	NM_007636.2		12461	126521834	NM_007636.2	Cct2	NP_031662.2	ILMN_1218488	006330187	S	1154	GAAGAAGTTATGATCGGGGAAGATAAACTCATTCACTTTTCTGGGGTTGC	10	-	116493100-116493149	10qD2	Mus musculus chaperonin containing Tcp1, subunit 2 (beta) (Cct2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cctb	Cctb
Mus musculus	RefSeq	ILMN_197263	ILMN_324329	LOC100042492	XM_001478466.1	XM_001478466.1		100042492	149264336	XM_001478466.1	LOC100042492	XP_001478516.1	ILMN_1221109	007650519	S	775	GCCATCAGCCCTAAAGAAAGGTGAGATGGGTGACTACCTAGGCATCTGAC	13	+	66924875-66924924	13qB3	PREDICTED: Mus musculus hypothetical protein LOC100042492 (LOC100042492), mRNA.					
Mus musculus	RefSeq	ILMN_185352	ILMN_237256	ASXL1	NM_001039939.1	NM_001039939.1		228790	90568302	NM_001039939.1	Asxl1	NP_001035028.1	ILMN_1215405	000730360	S	5626	TGCACCTCTAACGTTTTATCCTGTATTTATATGTTGTACACAGTACTGGC	2	+	153228695-153228744	2qH1	Mus musculus additional sex combs like 1 (Drosophila) (Asxl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0978; DKFZp434N0535	mKIAA0978; DKFZp434N0535
Mus musculus	RefSeq	ILMN_185352	ILMN_237256	ASXL1	NM_001039939.1	NM_001039939.1		228790	90568302	NM_001039939.1	Asxl1	NP_001035028.1	ILMN_2492864	006860500	S	5373	GGGGTCTGGAAATAGGGCTGTCTGCTTATGGAAATGCCATCTGTAGACCT	2	+	153228442-153228491	2qH1	Mus musculus additional sex combs like 1 (Drosophila) (Asxl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0978; DKFZp434N0535	mKIAA0978; DKFZp434N0535
Mus musculus	RefSeq	ILMN_185352	ILMN_237256	ASXL1	NM_001039939.1	NM_001039939.1		228790	90568302	NM_001039939.1	Asxl1	NP_001035028.1	ILMN_2527760	007150192	S	4315	GGGATGCCTTTTGTTGTGGATCTGCCTTTCTGGAAGTTACCCAGAGAGCC	2	+	153227384-153227433	2qH1	Mus musculus additional sex combs like 1 (Drosophila) (Asxl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0978; DKFZp434N0535	mKIAA0978; DKFZp434N0535
Mus musculus	RefSeq	ILMN_223554	ILMN_223554	SIX1	NM_009189.1	NM_009189.1		20471	33859493	NM_009189.1	Six1	NP_033215.1	ILMN_2904117	001450364	S	2307	GCAGGTCATCGGAAGCTCTTTTGTCAGATAGTGCCCAGAAAAATCCCAGG	12	-	73960909-73960958	12qC3	Mus musculus sine oculis-related homeobox 1 homolog (Drosophila) (Six1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IMP]; The orderly movement of myoblasts from one site to another, often during the development of a multicellular organism. A myoblast is a cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51451] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	BB138287	BB138287
Mus musculus	RefSeq	ILMN_223554	ILMN_223554	SIX1	NM_009189.1	NM_009189.1		20471	33859493	NM_009189.1	Six1	NP_033215.1	ILMN_2765704	007200605	S	2224	AGCAAACCTAATTTATCTATTTTTTTAAAAGGGAACTCGAACAAGAATTT	12	-	73960992-73961041	12qC3	Mus musculus sine oculis-related homeobox 1 homolog (Drosophila) (Six1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IMP]; The orderly movement of myoblasts from one site to another, often during the development of a multicellular organism. A myoblast is a cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51451] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	BB138287	BB138287
Mus musculus	RefSeq	ILMN_248722	ILMN_248722	EG408196	NM_001082542.1	NM_001082542.1		408196	127139205	NM_001082542.1	EG408196	NP_001076011.1	ILMN_2794741	006180735	S	175	GTAGGGTGTGGTTGTTTCCTTCACATAAAAGTCTACCGTGCACATTCTGG	16	+	36217755-36217804	16qB3	Mus musculus predicted gene, EG408196 (EG408196), mRNA.				Stfna1l1	Stfna1l1
Mus musculus	RefSeq	ILMN_214369	ILMN_214369	PADI3	NM_011060.3	NM_011060.3		18601	153792472	NM_011060.3	Padi3	NP_035190.2	ILMN_2647300	006590504	S	2784	GTTAGGAAAACTGGATTCCCAGAGAAATCTAAGACAGGACCGACCCTGGG				4qD3	Mus musculus peptidyl arginine deiminase, type III (Padi3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of peptidyl-arginine to form peptidyl-citrulline [goid 18101] [evidence IEA]	Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3 [goid 4668] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA4171; AI507004; Pdi3; Pad3; mKIAA4171	KIAA4171; AI507004; Pdi3; Pad3; mKIAA4171
Mus musculus	RefSeq	ILMN_187768	ILMN_316871	TCRG	XM_001475087.1	XM_001475087.1		434531	149263911	XM_001475087.1	Tcrg	XP_001475137.1	ILMN_1236143	000780048	S	291	ATTGAAGCAAGTAAAGATTTTAAAAGTTCTACCTCAACCTTGGAAATAAA	13	-	19428492-19428541	13qA2	PREDICTED: Mus musculus T cell receptor gamma chain (Tcrg), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_185974	ILMN_316871	TCRG	XM_001475087.1	XM_001475087.1		434531	149263911	XM_001475087.1	Tcrg	XP_001475137.1	ILMN_1215281	000270333	S	52	TGAGATGGTTCACCTCCTGCTGCCTCTGGGTTTTTGGGCTTGGGCAGCTG	13	-	19428731-19428748:19428853-19428884	13qA2	PREDICTED: Mus musculus T cell receptor gamma chain (Tcrg), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_186298	ILMN_229716	SNAP25	NM_011428.2	NM_011428.2		20614	24475932	NM_011428.2	Snap25	NP_035558.1	ILMN_2741123	000580577	S	1703	GGTTTGTCGAATGCTTTTGAAAGCTCTGTTTTCCAGACAATACTCTTGTG	2	+	136473506-136473555	2qF3	Mus musculus synaptosomal-associated protein 25 (Snap25), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 1a (or orthologs thereof) [goid 70044] [evidence ISO]; A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, and complexin I (or orthologs thereof) [goid 70032] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]	Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence IDA]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence ISO]	sp; SNAP-25; 25kDa	sp; SNAP-25; 25kDa
Mus musculus	Riken	ILMN_206322	ILMN_206322	GIN1	ri|D330022A08|PX00191B18|AK084620|941					AK084620	Gin1		ILMN_1229362	004850348	S	799	CTCTGAGTTTTAGGCCAGCATGGTCTCCAGAACAAGTTCCTGCCGGGGCA							The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193715	ILMN_248390	MARE	NM_181569.2	NM_181569.2		17168	142363143	NM_181569.2	Mare	NP_853547.1	ILMN_2717209	006290296	S	315	GGCCAAAAATTTGAACTGAAGATTGATAATGTACGGTTTGTTGGGCACCC	11	-	32167441-32167490	11qA4	Mus musculus alpha globin regulatory element containing gene (Mare), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	m(alpha)RE; HS-40; HS-26; Aag; CGTHBA	m(alpha)RE; HS-40; HS-26; Aag; CGTHBA
Mus musculus	MEEBO	ILMN_217726	ILMN_217726	9030605I04RIK	scl0074548.1_323				51780223	XM_135511	9030605I04Rik		ILMN_2774047	006580358	S	1252	CGTAGCATGTCTAGGAAACAGGATCTATCAAAACTCCTCAAATGGTATGC										
Mus musculus	RefSeq	ILMN_247627	ILMN_247627	ENPP2	NM_015744.1	NM_015744.1		18606	7657450	NM_015744.1	Enpp2	NP_056559.1	ILMN_2954474	003360162	S	2555	CCGGAAGACTAGCCGTAGCTATTCGGAAATTCTGACCCTCAAGACATACC	15	-	54670946-54670995	15qD1	Mus musculus ectonucleotide pyrophosphatase/phosphodiesterase 2 (Enpp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the reaction: H2O + 1-alkyl-sn-glycero-3-phosphoethanolamine = ethanol-amine + 1-alkyl-sn-glycerol 3-phosphate [goid 47391] [evidence IEA]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [evidence ISS]	ATX; Autotaxin; Pdnp2; PD-Ialpha; Npps2	ATX; Autotaxin; Pdnp2; PD-Ialpha; Npps2
Mus musculus	RefSeq	ILMN_220415	ILMN_220415	GJD2	NM_010290.2	NM_010290.2		14617	40254585	NM_010290.2	Gjd2	NP_034420.2	ILMN_2721734	006290524	S	2641	AGACAATTTTCCTCTCGTTGCTCTTATTCATTTAAGTGCCATATTCCTCC	2	-	113835525-113835574	2qE4	Mus musculus gap junction protein, delta 2 (Gjd2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]		cx36; connexin36	cx36; connexin36
Mus musculus	RefSeq	ILMN_220415	ILMN_220415	GJD2	NM_010290.2	NM_010290.2		14617	40254585	NM_010290.2	Gjd2	NP_034420.2	ILMN_2988743	003990142	S	2678	GCCATATTCCTCCTTTCCTGCCCACTGTGCATTTAGCTGAAGCACTAGGC	2	-	113835488-113835537	2qE4	Mus musculus gap junction protein, delta 2 (Gjd2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]		cx36; connexin36	cx36; connexin36
Mus musculus	RefSeq	ILMN_220415	ILMN_220415	GJD2	NM_010290.2	NM_010290.2		14617	40254585	NM_010290.2	Gjd2	NP_034420.2	ILMN_2738638	002680424	S	1028	GCGCACAGCAGCAAGGTCCAAGCTCCGAAGACAGGAAGGTATCTCCCGCT	2	-	113837138-113837187	2qE4	Mus musculus gap junction protein, delta 2 (Gjd2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]		cx36; connexin36	cx36; connexin36
Mus musculus	RefSeq	ILMN_209505	ILMN_209505	MAGEA5	NM_020018.1	NM_020018.1		17141	9910401	NM_020018.1	Magea5	NP_064402.1	ILMN_1233373	000780246	S	75	GGTCCCTGGTATCAAAGAGCTGAAACCCTGGTAAAGCAGAGTTTGACTAG	X	-	151489977-151490026	XqF3	Mus musculus melanoma antigen, family A, 5 (Magea5), mRNA.				Mage-a5; MGC130208	Mage-a5; MGC130208
Mus musculus	RefSeq	ILMN_209505	ILMN_209505	MAGEA5	NM_020018.1	NM_020018.1		17141	9910401	NM_020018.1	Magea5	NP_064402.1	ILMN_2914608	003170112	S	1215	CTCCAGGTCATAGTCACTGATTCCATTGCTGTACCCTCATTGGACAGCTG	X	-	151487902-151487951	XqF3	Mus musculus melanoma antigen, family A, 5 (Magea5), mRNA.				Mage-a5; MGC130208	Mage-a5; MGC130208
Mus musculus	RefSeq	ILMN_209505	ILMN_209505	MAGEA5	NM_020018.1	NM_020018.1		17141	9910401	NM_020018.1	Magea5	NP_064402.1	ILMN_2596441	005220564	S	1465	GTCTCAAGATACTAGCGACACTGAAATTGTAATTTTCTGGGGAATGGAAA	X	-	151487652-151487701	XqF3	Mus musculus melanoma antigen, family A, 5 (Magea5), mRNA.				Mage-a5; MGC130208	Mage-a5; MGC130208
Mus musculus	RefSeq	ILMN_199519	ILMN_199519	LOC383605	XM_357149.1	XM_357149.1			38073933	XM_357149.1	LOC383605		ILMN_1223550	003450324	S	708	GCTAGTAAAGAAGGCACGAAAAGGCAGGGAAACAGGAAAAGACATCAGGG										
Mus musculus	RefSeq	ILMN_197092	ILMN_197092	LOC380814	XM_354726.1	XM_354726.1			38073968	XM_354726.1	LOC380814		ILMN_1236931	006110136	S	1299	ACAGAAAGAGGTGAGGGGATTTAAGATTGAGGGATCACAGTTCTCCCCCC										
Mus musculus	RefSeq	ILMN_219998	ILMN_219998	KCTD6	NM_027782.1	NM_027782.1		71393	29789206	NM_027782.1	Kctd6	NP_082058.1	ILMN_1247335	005690347	S	984	GCTCACGTTTTGGGACATGGAAGAGACTGTTGTTGGGTTTTAGTGTGGGC	14	+	9055411-9055460	14qA1	Mus musculus potassium channel tetramerisation domain containing 6 (Kctd6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	AU044285; 5430433B02Rik	AU044285; 5430433B02Rik
Mus musculus	RefSeq	ILMN_219998	ILMN_219998	KCTD6	NM_027782.1	NM_027782.1		71393	29789206	NM_027782.1	Kctd6	NP_082058.1	ILMN_2974117	003610201	S	1552	CCCTGTGGTAGAAACCTTATGCCTGGTACAGTTTCATTCCCAAGGTACTG	14	+	9055979-9056028	14qA1	Mus musculus potassium channel tetramerisation domain containing 6 (Kctd6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	AU044285; 5430433B02Rik	AU044285; 5430433B02Rik
Mus musculus	MEEBO	ILMN_186101	ILMN_186101	8030404L10RIK	scl097514.1_206						8030404L10Rik		ILMN_1226383	003840037	S	1	CCTTTCTGACCTCAGGTTTGTTAGTGACCTTGGTTGTGTCGTCTTCCAGC										
Mus musculus	RefSeq	ILMN_210782	ILMN_210782	MBD3L2	NM_144934.2	NM_144934.2		234988	40538831	NM_144934.2	Mbd3l2	NP_659183.2	ILMN_2751997	004150746	S	456	TGCACTTAAGAGACTGAAGAAACATCAAGTTGGAGAGAATAAACAGGACC	9	+	18249100-18249149	9qA2	Mus musculus methyl-CpG binding domain protein 3-like 2 (Mbd3l2), mRNA.					
Mus musculus	RefSeq	ILMN_210782	ILMN_210782	MBD3L2	NM_144934.2	NM_144934.2		234988	40538831	NM_144934.2	Mbd3l2	NP_659183.2	ILMN_2609129	000020047	S	2010	GCTGTTATACCTGTCATCTATACTAGCTCTCTATTATGAGCTACACCTCT	9	+	18250654-18250703	9qA2	Mus musculus methyl-CpG binding domain protein 3-like 2 (Mbd3l2), mRNA.					
Mus musculus	MEEBO	ILMN_223644	ILMN_223644	2010001E11RIK	scl38038.4.1_323	XM_125582.1			20858406	XM_125582.1	2010001E11Rik		ILMN_1229483	003780240	S	2208	GACCATAGTTAGGGACTTAGTGTGTGAACATTGTATAAAAAAATCTCAGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189420	ILMN_230965	PLXNB2	XM_912589.3	XM_912589.3		140570	149267067	XM_912589.3	Plxnb2	XP_917682.1	ILMN_2461098	002100484	S	6155	CGGTTCCTGGACTGTAACTGTCTGCCAGACGGAAGGAGAAGAAAAAGCGG				15qE3	PREDICTED: Mus musculus plexin B2, transcript variant 13 (Plxnb2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_208637	ILMN_248990	CNTN2	NM_177129.5	NM_177129.5		21367	124248523	NM_177129.5	Cntn2	NP_796103.2	ILMN_1237629	003130369	S	4378	GGTCAGCATCAATGTGGCCCTGCCTGCTTCCAGGAATACCCTCCATCACC	1	-	134411109-134411158	1qE4	Mus musculus contactin 2 (Cntn2), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TAG-1; D130012K04Rik; Tax	TAG-1; D130012K04Rik; Tax
Mus musculus	RefSeq	ILMN_208637	ILMN_248990	CNTN2	NM_177129.5	NM_177129.5		21367	124248523	NM_177129.5	Cntn2	NP_796103.2	ILMN_2691103	002630722	S	1287	GCCTGAGTGGCTAAAGGTGATCTCAGACACAGAAGCCGACATTGGTTCCA	1	-	134422477-134422526	1qE4	Mus musculus contactin 2 (Cntn2), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TAG-1; D130012K04Rik; Tax	TAG-1; D130012K04Rik; Tax
Mus musculus	RefSeq	ILMN_196627	ILMN_248990	CNTN2	NM_177129.5	NM_177129.5		21367	124248523	NM_177129.5	Cntn2	NP_796103.2	ILMN_1249156	003800059	S	2796	GAACGTAAGCTGGGAGCCTGTGCTACAAGACATGAACGGCATCCTCCTGG	1	-	134414881-134414930	1qE4	Mus musculus contactin 2 (Cntn2), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TAG-1; D130012K04Rik; Tax	TAG-1; D130012K04Rik; Tax
Mus musculus	RefSeq	ILMN_216592	ILMN_248990	CNTN2	NM_177129.5	NM_177129.5		21367	124248523	NM_177129.5	Cntn2	NP_796103.2	ILMN_2672943	006370148	S	5836	GGGAGGTGAGGCTGTGCCAGCAGCTTTGGAGCTTCGAGTGTTATCTAAGG	1	-	134409651-134409700	1qE4	Mus musculus contactin 2 (Cntn2), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TAG-1; D130012K04Rik; Tax	TAG-1; D130012K04Rik; Tax
Mus musculus	RefSeq	ILMN_219664	ILMN_219664	PCDHB9	NM_053134.3	NM_053134.3		93880	113866010	NM_053134.3	Pcdhb9	NP_444364.3	ILMN_2711955	004850661	S	2779	ATCTCACGACTACAAGTAGCTCAAGTAGCATAGAATTTCCTCAAGTGACT	18	+	37563287-37563336	18qB3	Mus musculus protocadherin beta 9 (Pcdhb9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PcdhbI; Pcdhb4C	PcdhbI; Pcdhb4C
Mus musculus	RefSeq	ILMN_185188	ILMN_185188	VAMP2	NM_009497.3	NM_009497.3		22318	118130363	NM_009497.3	Vamp2	NP_033523.1	ILMN_2424912	006480056	S	2098	GCCCCATGCCCCCAATTCTGTGGCGCATCCAGATTGTGAAAATGTACAAT	11	+	68905817-68905866	11qB3	Mus musculus vesicle-associated membrane protein 2 (Vamp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; The lipid bilayer surrounding a zymogen granule [goid 42589] [evidence IDA]; A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 1a (or orthologs thereof) [goid 70044] [evidence ISO]; A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, and complexin I (or orthologs thereof) [goid 70032] [evidence ISO]	The joining of two lipid bilayers to form a single membrane [goid 6944] [evidence IMP]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IDA]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IDA]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence IDA]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence ISO]; Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence ISO]	Syb2; Syb-2	Syb2; Syb-2
Mus musculus	RefSeq	ILMN_189928	ILMN_330651	LOC100047024	XM_001477239.1	XM_001477239.1		100047024	149255606	XM_001477239.1	LOC100047024	XP_001477289.1	ILMN_2465673	003450731	S	232	CTTATCCATAGTGCCTCCACTAGGGCCGGTGGTGTCCCAGTCCGGTTCAG					PREDICTED: Mus musculus similar to [Human Ig rearranged gamma chain mRNA, V-J-C region and complete cds.], gene product (LOC100047024), mRNA.					
Mus musculus	MEEBO	ILMN_192751	ILMN_192751	IGHA_J00475$V00785_IG_HEAVY_CONSTANT_ALPHA_135	IGHA_J00475$V00785_Ig_heavy_constant_alpha_135						IGHA_J00475$V00785_Ig_heavy_constant_alpha_135		ILMN_1234706	000430053	S	2	ATATAACCACCGTGAACTTTCCACCTGCCCTCGCCTCTGGGGGACGGTAC										
Mus musculus	MEEBO	ILMN_184144	ILMN_184144	ITK	scl40303.18_152				6754385	NM_010583	Itk		ILMN_1252472	001660333	S	18	CTCTGTCTCACCCAATCTCTGCATCATCTCCTGGGTTCACAAAAACAATC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187860	ILMN_259862	AMZ1	NM_173405.2	NM_173405.2		231842	114326472	NM_173405.2	Amz1	NP_775581.1	ILMN_2756474	002070451	S	2450	CTGAGGACATTTGTGCCCTGTGAAGCTGGCAGACGTGGGGGTGATGGGGC	5	+	141229031-141229080	5qG2	Mus musculus archaelysin family metallopeptidase 1 (Amz1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	5330426I05; Amz1	5330426I05; Amz1
Mus musculus	RefSeq	ILMN_220179	ILMN_220179	HAO3	NM_019545.3	NM_019545.3		56185	142364954	NM_019545.3	Hao3	NP_062418.2	ILMN_2718638	007380743	S	1304	GGTCCCATTCATAATAGAAGTTTAAGCCCTCTACCCTCAAAAATTGAGAC	3	-	98679113-98679162	3qF2.2	Mus musculus hydroxyacid oxidase (glycolate oxidase) 3 (Hao3), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: (S)-2-hydroxy-acid + O2 = 2-oxo acid + H2O2 [goid 3973] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]	HAOX3; AI325478	HAOX3; AI325478
Mus musculus	RefSeq	ILMN_221500	ILMN_221500	GPR109A	NM_030701.1	NM_030701.1		80885	13507639	NM_030701.1	Gpr109a	NP_109626.1	ILMN_2847115	005700161	S	1564	CCCAGATGTCACTGATAAGCCAGTTGGTCACTTGTGTTCGGTGGGACCAG	5	-	124313892-124313941	5qF	Mus musculus G protein-coupled receptor 109A (Gpr109a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IDA]; Combining with a purine nucleotide to initiate a change in cell activity [goid 1614] [evidence IDA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	PUMA-G; Pumag; Gpr109b; mHM74b; HM74	PUMA-G; Pumag; Gpr109b; mHM74b; HM74
Mus musculus	RefSeq	ILMN_226286	ILMN_226286	OLFR1052	NM_147010.1	NM_147010.1		259012	22128916	NM_147010.1	Olfr1052	NP_667221.1	ILMN_3006729	004730605	S	695	CTGGACGACAAAAAGCCTTCTCCACTTGTGCTTCTCACCTGACTGCTGTC	2	+	86138669-86138718	2qD	Mus musculus olfactory receptor 1052 (Olfr1052), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR172-1	MOR172-1
Mus musculus	RefSeq	ILMN_209510	ILMN_209510	MAGEB3	NM_008545.2	NM_008545.2		17147	31543227	NM_008545.2	Mageb3	NP_032571.2	ILMN_1246766	006940392	S	2031	GTGCCATGCTTTTTGTTAACTGCATACAGAAGTAACTGTCACTTGTCAGG	2	-	121779748-121779797	2qE5	Mus musculus melanoma antigen, family B, 3 (Mageb3), mRNA.				Mage-rs3; Mage-b3; Mage-ps1; Smage3	Mage-rs3; Mage-b3; Mage-ps1; Smage3
Mus musculus	RefSeq	ILMN_209510	ILMN_209510	MAGEB3	NM_008545.2	NM_008545.2		17147	31543227	NM_008545.2	Mageb3	NP_032571.2	ILMN_2702483	004540730	S	739	TTGAGACAGGAGAGGCTTGGACGCCAGTCTGAAGAGAACAATCCTAGGGT	2	-	121781040-121781089	2qE5	Mus musculus melanoma antigen, family B, 3 (Mageb3), mRNA.				Mage-rs3; Mage-b3; Mage-ps1; Smage3	Mage-rs3; Mage-b3; Mage-ps1; Smage3
Mus musculus	RefSeq	ILMN_209510	ILMN_209510	MAGEB3	NM_008545.2	NM_008545.2		17147	31543227	NM_008545.2	Mageb3	NP_032571.2	ILMN_2941984	003840400	S	1828	CATTCCAAGGCCCCATCCCAAAAGTCCTCTAATGTGTAGTTGAGTCTGTT	2	-	121779951-121779962:121779963-121780000	2qE5	Mus musculus melanoma antigen, family B, 3 (Mageb3), mRNA.				Mage-rs3; Mage-b3; Mage-ps1; Smage3	Mage-rs3; Mage-b3; Mage-ps1; Smage3
Mus musculus	RefSeq	ILMN_209510	ILMN_209510	MAGEB3	NM_008545.2	NM_008545.2		17147	31543227	NM_008545.2	Mageb3	NP_032571.2	ILMN_2596487	000770561	S	812	GAGTTCGGAAGTCCTGATTCCTGCCTGTCAGCTCTTCTACTTCAGTCCTG	2	-	121780967-121781016	2qE5	Mus musculus melanoma antigen, family B, 3 (Mageb3), mRNA.				Mage-rs3; Mage-b3; Mage-ps1; Smage3	Mage-rs3; Mage-b3; Mage-ps1; Smage3
Mus musculus	Riken	ILMN_207392	ILMN_207392	D730033A03RIK	ri|D730033A03|PX00673N10|AK085736|2175					AK085736	D730033A03Rik		ILMN_1237794	002760762	S	2030	AGCTGCACCATCAAGGATGACTACCACTCCTATAGAGACTCCCTACCAGC										
Mus musculus	MEEBO	ILMN_223957	ILMN_223957	EMILIN2	scl0246707.2_7				34328358	NM_145158	Emilin2		ILMN_2772281	005490026	S	3787	CACTGGACAACCAGAAGACTCGTTATGTCCCCTTGGTTGGAAGCTGGCTT						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_207234	ILMN_240091	RCBTB1	XM_001000052.1	XM_001000052.1		71330	94398098	XM_001000052.1	Rcbtb1	XP_001000052.1	ILMN_1235507	003440072	S	54	GCCATCAGTCCCTTTGTTCTAGATACACTCTGGTTAGCCTGGGAGAGGAG				14qC3	PREDICTED: Mus musculus regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1, transcript variant 2 (Rcbtb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187559	ILMN_187559	VDR	NM_009504.3	NM_009504.3		22337	144227202	NM_009504.3	Vdr	NP_033530.2	ILMN_2445166	003180739	S	4089	CGTGGGAGAAAGTAGGGGAGGAGTCCAAACCAGGCCACCAGAGATGGTTG	15	-	97685073-97685122	15qF1	Mus musculus vitamin D receptor (Vdr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process by which nutrients are taken up from the contents of the intestine [goid 50892] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Nr1i1	Nr1i1
Mus musculus	RefSeq	ILMN_227946	ILMN_227946	ACP2	NM_007387.1	NM_007387.1		11432	29150252	NM_007387.1	Acp2	NP_031413.1	ILMN_2887075	005260253	S	2572	ATGACACCTTCTGTTGCTGGTCTGTCTCAGAGGTTGGGGCTGTCTTGGGG	2	+	91052192-91052241	2qE1	Mus musculus acid phosphatase 2, lysosomal (Acp2), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IMP]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IDA]	LAP; Acp-2	LAP; Acp-2
Mus musculus	RefSeq	ILMN_209691	ILMN_227946	ACP2	NM_007387.1	NM_007387.1		11432	29150252	NM_007387.1	Acp2	NP_031413.1	ILMN_2735575	004610707	S	2463	CTGGACCCCACAGATGGGAACACATTCTGTGAGGAGTGGCAGCTGTTTGT	2	+	91052083-91052132	2qE1	Mus musculus acid phosphatase 2, lysosomal (Acp2), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IMP]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IDA]	LAP; Acp-2	LAP; Acp-2
Mus musculus	RefSeq	ILMN_195172	ILMN_227946	ACP2	NM_007387.1	NM_007387.1		11432	29150252	NM_007387.1	Acp2	NP_031413.1	ILMN_1234364	006480497	S	2404	TGGCCTATTAACAAACAGCTGCCACTCCTCACAGAATGTGTTCCCATCTG	2	+	91052024-91052073	2qE1	Mus musculus acid phosphatase 2, lysosomal (Acp2), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IMP]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IDA]	LAP; Acp-2	LAP; Acp-2
Mus musculus	RefSeq	ILMN_218918	ILMN_218918	CYP26B1	NM_175475.2	NM_175475.2		232174	31341987	NM_175475.2	Cyp26b1	NP_780684.1	ILMN_2905120	000020129	S	3893	CGTCAGAGGCCTTCATTTTCAGGGGGCCGGCCGAGGAAGTGTGAAGGAAA	6	-	84522152-84522201	6qC3	Mus musculus cytochrome P450, family 26, subfamily b, polypeptide 1 (Cyp26b1), mRNA.		The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IC ]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CP26; P450RAI-2	CP26; P450RAI-2
Mus musculus	Riken	ILMN_205177	ILMN_205177	NCOA2	ri|C230086N22|PX00177D19|AK048972|2837					AK048972	Ncoa2		ILMN_1226694	000450068	S	2499	ACAGCAGCGTGTGTCAGAGGAGGCCCAAGAAGCTGGGTTGTGTCCAGTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any series of molecular signals generated as a consequence of a steroid hormone binding to its receptor [goid 30518] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IGI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA];  [goid 30375] [evidence IDA];  [goid 30374] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223265	ILMN_223265	KRTAP6-2	NM_010673.2	NM_010673.2		16701	113195693	NM_010673.2	Krtap6-2	NP_034803.2	ILMN_2795861	005220682	S	432	GCTCTTACTACAGATCTGGCTGCTGTGGCTACGGACCATCTTGCTACAGA	16	-	89419875-89419924	16qC3.3	Mus musculus keratin associated protein 6-2 (Krtap6-2), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			AI646275; HGTpII.4	AI646275; HGTpII.4
Mus musculus	RefSeq	ILMN_251256	ILMN_251256	TNRC6C	NM_198022.2	NM_198022.2		217351	124378034	NM_198022.2	Tnrc6c	NP_932139.2	ILMN_2881681	002260332	S	7772	GAACGCCAGGGCTCCCGAGGGCGGTGCCACACCACTTCATGTATTTTTAA	11	+	117623799-117623848	11qE2	Mus musculus trinucleotide repeat containing 6C (Tnrc6c), mRNA. XM_126551 XM_982911			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	9930033H14Rik; mKIAA1582	9930033H14Rik; mKIAA1582
Mus musculus	RefSeq	ILMN_193035	ILMN_251256	TNRC6C	NM_198022.2	NM_198022.2		217351	124378034	NM_198022.2	Tnrc6c	NP_932139.2	ILMN_2493521	002370484	S	7786	CCGAGGGCGGTGCCACACCACTTCATGTATTTTTAAACCCAACTCCTAGC	11	+	117623813-117623862	11qE2	Mus musculus trinucleotide repeat containing 6C (Tnrc6c), mRNA. XM_126551 XM_982911			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	9930033H14Rik; mKIAA1582	9930033H14Rik; mKIAA1582
Mus musculus	RefSeq	ILMN_193035	ILMN_251256	TNRC6C	NM_198022.2	NM_198022.2		217351	124378034	NM_198022.2	Tnrc6c	NP_932139.2	ILMN_1227639	001030681	S	5946	CAGCGACACTGCCCACTGGAACACCCCATGCCTGAGTGGCAAAGGCAGCA	11	+	117621973-117622022	11qE2	Mus musculus trinucleotide repeat containing 6C (Tnrc6c), mRNA. XM_126551 XM_982911			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	9930033H14Rik; mKIAA1582	9930033H14Rik; mKIAA1582
Mus musculus	RefSeq	ILMN_218230	ILMN_218230	ZYG11A	XM_131619.6	XM_131619.6		230590	149252841	XM_131619.6	Zyg11a	XP_131619.5	ILMN_1256859	007550010	S	2493	CTGAAGCATAGAGTTGTCCAGAAAAAACACACTACAGCGATCGTCTGTGC	4	-	107854660-107854706:107854707-107854709	4qC7	PREDICTED: Mus musculus zyg-11 homolog A (C. elegans) (Zyg11a), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199190	ILMN_199190	LOC331762	XM_284940.2	XM_284940.2			38091675	XM_284940.2	LOC331762		ILMN_2534365	003710093	S	205	GAGCGAAGACTTGGGTACAAGGCTAACCTTCAGTCTGTTGCTGAGGAGAG										
Mus musculus	RefSeq	ILMN_198351	ILMN_198351	LOC243374	XM_144696.2	XM_144696.2			38084194	XM_144696.2	LOC243374		ILMN_1237662	003610184	S	2219	CGTGGTGAAGCGACACAACTGGGTGACCAGCAATAGCATGTGTGCCCTGG										
Mus musculus	RefSeq	ILMN_194300	ILMN_256902	LOC672274	XR_003788.1	XR_003788.1		672274	94395913	XR_003788.1	LOC672274		ILMN_2505185	000430706	S	5311	GTCGCTAAATATAATTGTTTCAGTCCTATGGCATGGTGATAGCATATGTG					PREDICTED: Mus musculus similar to Transcription factor SOX-4 (LOC672274), mRNA.					
Mus musculus	RefSeq	ILMN_214301	ILMN_214301	OGG1	NM_010957.3	NM_010957.3		18294	142374385	NM_010957.3	Ogg1	NP_035087.2	ILMN_1241289	000360746	S	1380	GGCCAGAACCCCAAATCAAAGTCAGTTTTTACAATAGGGAAAAAGGAAGC	6	+	113284052-113284101	6qE3	Mus musculus 8-oxoguanine DNA-glycosylase 1 (Ogg1), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IDA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [evidence IDA]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the removal of oxidized bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 702] [evidence TAS]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [evidence IEA]; Catalysis of the removal of 8-oxo-7,8-dihydroguanine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar [goid 34039] [evidence IMP]	Mmh	Mmh
Mus musculus	RefSeq	ILMN_216429	ILMN_216429	NNT	NM_008710.3	NM_008710.3		18115	142347945	NM_008710.3	Nnt	NP_032736.2	ILMN_1213535	003840102	S	4166	CTGATGACAAAGAGCTAACATTAAATGGTTCCACTCATTAACACTGGAGG	13	-	120123561-120123610	13qD2.3	Mus musculus nicotinamide nucleotide transhydrogenase (Nnt), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+ [goid 8746] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD+ and B-specific (i.e. the pro-S hydrogen is transferred) with respect to NADP+ [goid 8750] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	BB168308; AI323702; 4930423F13Rik	BB168308; AI323702; 4930423F13Rik
Mus musculus	RefSeq	ILMN_216429	ILMN_216429	NNT	NM_008710.3	NM_008710.3		18115	142347945	NM_008710.3	Nnt	NP_032736.2	ILMN_2743338	006380241	S	5195	GGACCAGTCTCCAGCACCATGCAGTACAGGGTATAATCTACTCCCCAAGT				13qD2.3	Mus musculus nicotinamide nucleotide transhydrogenase (Nnt), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+ [goid 8746] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD+ and B-specific (i.e. the pro-S hydrogen is transferred) with respect to NADP+ [goid 8750] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	BB168308; AI323702; 4930423F13Rik	BB168308; AI323702; 4930423F13Rik
Mus musculus	RefSeq	ILMN_216429	ILMN_216429	NNT	NM_008710.3	NM_008710.3		18115	142347945	NM_008710.3	Nnt	NP_032736.2	ILMN_2671012	002470646	S	3961	ACTTCTATTTTAATATGTAAAAGGTCTAGATAGTTTAAGTAATAACTTAA	13	-	120123766-120123815	13qD2.3	Mus musculus nicotinamide nucleotide transhydrogenase (Nnt), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+ [goid 8746] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD+ and B-specific (i.e. the pro-S hydrogen is transferred) with respect to NADP+ [goid 8750] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	BB168308; AI323702; 4930423F13Rik	BB168308; AI323702; 4930423F13Rik
Mus musculus	RefSeq	ILMN_216883	ILMN_249926	1700008I05RIK	NM_027952.2	NM_027952.2		71841	141802960	NM_027952.2	1700008I05Rik	NP_082228.1	ILMN_2676443	005490092	S	1460	GATGGAAGTTTGTTAATCTGATGCACCACAACCAGCATGTGTTTAGCCCG	X	-	132189503-132189552	XqF1	Mus musculus RIKEN cDNA 1700008I05 gene (1700008I05Rik), mRNA.				TCP11; C77164	TCP11; C77164
Mus musculus	RefSeq	ILMN_221063	ILMN_221063	SLC26A1	NM_174870.2	NM_174870.2		231583	31543720	NM_174870.2	Slc26a1	NP_777359.2	ILMN_2959748	004260286	S	3341	GCCCCGACAAGGTCAGATCCACCACCTCAGCATCTCTGTAAAACAAGCTC	5	-	109099318-109099367	5qF	Mus musculus solute carrier family 26 (sulfate transporter), member 1 (Slc26a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IDA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oxalate into, out of, within or between cells. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals [goid 19532] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of oxalate from one side of the membrane to the other. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals [goid 19531] [evidence IDA]; Catalysis of the transfer of chloride ions from one side of a membrane to the other [goid 15108] [evidence IDA]; Catalysis of the transfer of sulfate ions (SO4 2-) from one side of a membrane to the other [goid 15116] [evidence IDA]	Sat1	Sat1
Mus musculus	RefSeq	ILMN_196453	ILMN_196453	5830415F09RIK	XM_131394.3	XM_131394.3			38078297	XM_131394.3	5830415F09Rik		ILMN_2665415	001740736	S	1993	TCCTGAACAGTGATTCTCTGAAGTGGTGCTTCGAGATCTAGAAATGTTTC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200596	ILMN_200596	LOC383383	XM_357021.1	XM_357021.1			38084018	XM_357021.1	LOC383383		ILMN_1259002	003060315	S	1861	GAGCCCAAGGCCTCAGAACCAAGGTGGCATGACAGAGAGGCTTCCTGCTA										
Mus musculus	Riken	ILMN_206292	ILMN_206292	A430079D01RIK	ri|A430079D01|PX00137P05|AK079833|1307					AK079833	A430079D01Rik		ILMN_2579025	004150093	S	914	GGGCAGGTTTCTGGTTTGGCCAGAGGGTGCTTTGCAGGGTGATACTCAGA										
Mus musculus	Riken	ILMN_203392	ILMN_203392	6230416I01RIK	ri|6230416I01|PX00042M19|AK031770|2441					AK031770	6230416I01Rik		ILMN_1227223	004250184	S	2075	CCAGTCGGTTCCTCAGACTTGGTCTTTTTCAGAGCTGGTATGGGAGGTGA										
Mus musculus	RefSeq	ILMN_222151	ILMN_222151	AP2A2	NM_007459.2	NM_007459.2		11772	40254645	NM_007459.2	Ap2a2	NP_031485.2	ILMN_1237891	000610538	S	3977	AGACTGAGCTGTATGGGGTCATCTGTACGTACACAGCAGTGTTGTGTCCC	7	+	148818306-148818355	7qF5	Mus musculus adaptor protein complex AP-2, alpha 2 subunit (Ap2a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence TAS]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW146353; C78001; Adtab; AF006990; L25; 2410074K14Rik	AW146353; C78001; Adtab; AF006990; L25; 2410074K14Rik
Mus musculus	RefSeq	ILMN_184684	ILMN_236788	TOMM40	NM_016871.1	NM_016871.1		53333	8394479	NM_016871.1	Tomm40	NP_058567.1	ILMN_2509376	001050286	S	1024	AAGGAGGGGACCTCCCATGCCCAAGGATCCCCAGCGCCAGGGGACAGTGC	7	-	20286932-20286981	7qA3	Mus musculus translocase of outer mitochondrial membrane 40 homolog (yeast) (Tomm40), mRNA.	The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the mitochondrial membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 32592] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Catalysis of the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion [goid 8308] [evidence IEA]	Mom35; AW539759; MGC118268; Tom40	Mom35; AW539759; MGC118268; Tom40
Mus musculus	RefSeq	ILMN_241192	ILMN_241192	AU018829	NM_001031622.1	NM_001031622.1		545762	75832178	NM_001031622.1	AU018829	NP_001026793.1	ILMN_3084906	000240300	A	1326	TCTCCATGGCCATCCTGAAGGACCTTTTGCAGCACACAGCCAACTGGAGC	Un|NT_166440.1	-	137751-137800		Mus musculus expressed sequence AU018829 (AU018829), mRNA.				MGC107506	MGC107506
Mus musculus	RefSeq	ILMN_241192	ILMN_241192	AU018829	NM_001031622.1	NM_001031622.1		545762	75832178	NM_001031622.1	AU018829	NP_001026793.1	ILMN_3013905	004890059	I	1785	GATGGAGTCAGAATAACAGTTTGGCATTTATATGTGGCTTCTGCCCCGAC	Un|NT_166440.1	-	137292-137341		Mus musculus expressed sequence AU018829 (AU018829), mRNA.				MGC107506	MGC107506
Mus musculus	Riken	ILMN_203558	ILMN_203558	9330159G10RIK	ri|9330159G10|PX00106O09|AK034142|3075					AK034142	9330159G10Rik		ILMN_1229012	004210132	S	2710	GGGCAAGGAATAAAGGACAAGGGCTTTTCTGAGCCCCAGTGACCCCATCT										
Mus musculus	RefSeq	ILMN_215999	ILMN_310426	D930036J05	XM_001479857.1	XM_001479857.1		215467	149259953	XM_001479857.1	D930036J05	XP_001479907.1	ILMN_2666215	004060612	S	706	GTCTGAACACGCTCTTTCTTTGTAGGCTGAGAACCCTTGGAGGCTGACTT	9	+	46811628-46811677	9qA5.3	PREDICTED: Mus musculus hypothetical protein D930036J05 (D930036J05), mRNA.					
Mus musculus	RefSeq	ILMN_198065	ILMN_198065	LOC277047	XM_203582.2	XM_203582.2			38081420	XM_203582.2	LOC277047		ILMN_2530369	006520041	S	1112	TCTCAGCAAAGAGGATTGTCAGGGCTAGGAAGCTGGATCTGCAGTGCAAC										
Mus musculus	RefSeq	ILMN_201581	ILMN_228220	PRICKLE1	NM_001033217.3	NM_001033217.3		106042	146198802	NM_001033217.3	Prickle1	NP_001028389.1	ILMN_1224069	006020356	S	2960	CAGCCGCTTTGGTGTCTAGTCCACAAGAGAACACTCCAGAAACTGCCGGC				15qE3	Mus musculus prickle like 1 (Drosophila) (Prickle1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Prickle; 1110058P22Rik; AW215793	Prickle; 1110058P22Rik; AW215793
Mus musculus	RefSeq	ILMN_212704	ILMN_228220	PRICKLE1	NM_001033217.3	NM_001033217.3		106042	146198802	NM_001033217.3	Prickle1	NP_001028389.1	ILMN_1228245	003190731	S	3934	CTGGGTTCAGCCGGAGAGTCATGCTGGATTTGAACTAATGAGCGGGTAGT				15qE3	Mus musculus prickle like 1 (Drosophila) (Prickle1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Prickle; 1110058P22Rik; AW215793	Prickle; 1110058P22Rik; AW215793
Mus musculus	Riken	ILMN_205468	ILMN_205468	PRLR	ri|A630063N04|PX00147I11|AK042147|923					AK042147	Prlr		ILMN_1254895	000050561	S	250	CTCCGTCACCTTATAAAACTGGCAGGCTCTGGACCTTTTGCACGCTGGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]; Any process that modulates the frequency, rate or extent of epithelial cell differentiation [goid 30856] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with prolactin to initiate a change in cell activity [goid 4925] [evidence IMP]; Combining with prolactin to initiate a change in cell activity [goid 4925] [evidence IDA]		
Mus musculus	Riken	ILMN_205705	ILMN_205705	FMR1	ri|B430203J19|PX00071I22|AK046605|2194					AK046605	Fmr1		ILMN_1215805	004890711	S	2041	TACTGTTATGCTTCCTTAGCTTGCAAGCTGGGAAGTAGGAACCCAGAGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_231005	ILMN_231005	ABL1	NM_009594.1	NM_009594.1		11350	33859503	NM_009594.1	Abl1	NP_033724.1	ILMN_2796842	002480114	S	5546	GCCAATAGGGTCATCCTTGAGTGGCTGTCTAACAGGAGGTTCCAGGGACA	2	+	31626027-31626076	2qB	Mus musculus v-abl Abelson murine leukemia oncogene 1 (Abl1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	MGC117749; AI325092; c-Abl; Abl; E430008G22Rik	MGC117749; AI325092; c-Abl; Abl; E430008G22Rik
Mus musculus	MEEBO	ILMN_212905	ILMN_212905	LOC384415	IGKV5-39_AJ235964_Ig_kappa_variable_5-39_12	XM_357633.1			38084360	XM_357633.1	LOC384415		ILMN_2631505	000610632	S	14	TCAGCTCCTTGGACTTTTGCTTTTCTGGACTTCAGCCTCCAGATGTGACA										
Mus musculus	MEEBO	ILMN_224094	ILMN_224094	2810423O19RIK	scl067905.1_18				31980929	NM_026447	2810423O19Rik		ILMN_1224437	002850747	S	1759	CCACACAAGGTACCTTCTTGAAACCTCTGGGCAGTCTCACATTTGCTTAA										
Mus musculus	MEEBO	ILMN_188748	ILMN_188748	V1RA1	scl29760.3.1_197	NM_011683.1			6755948	NM_011683.1	V1ra1		ILMN_2455370	001050093	S	20	AAAATAATAGGATTTAAAATTACCAAGACTTCAAATAGAAACTACAGCCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189210	ILMN_189210	2610204G22RIK	scl24613.3.1_107				31340982	NM_175157	2610204G22Rik		ILMN_1234386	004730762	S	635	GCCAAGCCGACTCCCAGAGCCTGCAGAGGGTACATTACACTCAGGAGCTA										
Mus musculus	MEEBO	ILMN_189210	ILMN_189210	2610204G22RIK	scl24613.3.1_107				31340982	NM_175157	2610204G22Rik		ILMN_2763888	002120367	S	631	GAAAGCCAAGCCGACTCCCAGAGCCTGCAGAGGGTACATTACACTCAGGA										
Mus musculus	Riken	ILMN_206866	ILMN_206866	D930029E03RIK	ri|D930029E03|PX00202F11|AK086444|1384					AK086444	D930029E03Rik		ILMN_2583273	000160010	S	1172	AGCAGGGTGCCCCTTTCTGAAGGTTTAGGCATCAGGCTTGCCTTGCCAAG										
Mus musculus	RefSeq	ILMN_223245	ILMN_223245	SPAG17	NM_028892.3	NM_028892.3		74362	142384574	NM_028892.3	Spag17	NP_083168.2	ILMN_2761352	000510072	S	2780	ACAAAGTATCCAGCAAAACAGAGCTATCAGACCAAGAAAAAGATAAAGAA	3	+	99854670-99854719	3qF2.2	Mus musculus sperm associated antigen 17 (Spag17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4931427F14Rik; PF6	4931427F14Rik; PF6
Mus musculus	RefSeq	ILMN_243591	ILMN_243591	TCEA3	NM_011542.1	NM_011542.1		21401	32189437	NM_011542.1	Tcea3	NP_035672.1	ILMN_2907214	002650372	S	908	GCCAGTGATGAGCTGAGGGAGCTGAGGAACGCCATGACTCAAGAGGCCAT	4	+	135827170-135827219	4qD3	Mus musculus transcription elongation factor A (SII), 3 (Tcea3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	S-II	S-II
Mus musculus	RefSeq	ILMN_186066	ILMN_255898	CAPRIN1	NM_016739.2	NM_016739.2		53872	42558247	NM_016739.2	Caprin1	NP_058019.2	ILMN_2761008	006510576	S	2473	GCGTCATCTTGAGCCTTGCACACAATACAATACTCAGATTCCTCACCCTT	2	-	103606692-103606741	2qE2	Mus musculus cell cycle associated protein 1 (Caprin1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]			Gpiap1; MMGPIP137; AL022980; P137; caprin-1; Gpiap	Gpiap1; MMGPIP137; AL022980; P137; caprin-1; Gpiap
Mus musculus	RefSeq	ILMN_186066	ILMN_255898	CAPRIN1	NM_016739.2	NM_016739.2		53872	42558247	NM_016739.2	Caprin1	NP_058019.2	ILMN_1247066	001510201	S	3180	ATGGATGGATAATCATAACACTTTTGGTCACATGTTTTCTCCTGCAGCCT	2	-	103605985-103606034	2qE2	Mus musculus cell cycle associated protein 1 (Caprin1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]			Gpiap1; MMGPIP137; AL022980; P137; caprin-1; Gpiap	Gpiap1; MMGPIP137; AL022980; P137; caprin-1; Gpiap
Mus musculus	Riken	ILMN_204158	ILMN_204158	UCHL3	ri|C730032N23|PX00087G09|AK050278|1268					AK050278	Uchl3		ILMN_1246522	001240445	S	951	AGAACCATGCTAGTTGCTAGTAATTCCACCAGTGAAAGGGACTGTCACGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence ISA]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IGI]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187977	ILMN_187977	TTC1	scl40318.9_292				20452461	NM_133795	Ttc1		ILMN_1236853	003130152	S	1	GTCCCCTTAACAGCAGCTGAAGCAGATTCTATATGACATTTGGAACCAGT								The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213732	ILMN_213732	TSFM	NM_025537.3	NM_025537.3		66399	118130307	NM_025537.3	Tsfm	NP_079813.1	ILMN_2640203	003830743	S	721	CCCTGGTCATCTGTGAGACTCCCGAGCAGATCGCAAACCTGGAGGAGGTT	10	-	126459797-126459846	10qD3	Mus musculus Ts translation elongation factor, mitochondrial (Tsfm), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	2310050B20Rik; 9430024O13Rik; EF-TS; EF-Tsmt	2310050B20Rik; 9430024O13Rik; EF-TS; EF-Tsmt
Mus musculus	RefSeq	ILMN_216701	ILMN_313374	LOC100044256	XM_001471639.1	XM_001471639.1		100044256	149257020	XM_001471639.1	LOC100044256	XP_001471689.1	ILMN_2703052	006660136	S	39	CCCTGCTCCTGATTTCAGAGGGAGATTGTGGCCTTTGCCCAGCTTTACAG					PREDICTED: Mus musculus hypothetical protein LOC100044256 (LOC100044256), mRNA.					
Mus musculus	RefSeq	ILMN_222234	ILMN_250157	BC013712	NM_001033308.2	NM_001033308.2		230787	142385534	NM_001033308.2	BC013712	NP_001028480.1	ILMN_2746681	000770273	S	2276	CACAGAGAAGGATCAAAGGCCACCAGCTTCAGCATCGCCCTGCCTCTCAG	4	-	132338488-132338537	4qD2.3	Mus musculus cDNA sequence BC013712 (BC013712), mRNA.				RP23-442A20.5; ICB-1	RP23-442A20.5; ICB-1
Mus musculus	RefSeq	ILMN_201084	ILMN_201084	LOC381993	XM_356052.1	XM_356052.1			38088952	XM_356052.1	LOC381993		ILMN_2541020	007560259	S	28	GCAGCTGGCGTCAAGTGCATTCAGGATAATGTGGATCTGGGCGAGCTTAT										
Mus musculus	RefSeq	ILMN_215171	ILMN_215171	DDX50	NM_053183.2	NM_053183.2		94213	142351139	NM_053183.2	Ddx50	NP_444413.1	ILMN_1224614	003890056	S	1382	GAGAAGGTAGTTTTAAAGTTTTGGTAGCAACCAATGTGGCTGCTCGTGGC	10	-	62090316-62090365	10qB4	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 (Ddx50), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4933429B04Rik; RH-II; GU2	4933429B04Rik; RH-II; GU2
Mus musculus	RefSeq	ILMN_222515	ILMN_251050	EG333669	NM_198635.2	NM_198635.2		333669	141802175	NM_198635.2	EG333669	NP_941037.1	ILMN_1227014	003890719	S	778	AGAAGTTCTGTGGCCGAGGAACCGGTTGTAGTGCCCTGGCTTACCCAGTG	10	+	75443656-75443705	10qC1	Mus musculus predicted gene, EG333669 (EG333669), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]			
Mus musculus	RefSeq	ILMN_222855	ILMN_222855	YIPF1	NM_145550.2	NM_145550.2		230584	142379932	NM_145550.2	Yipf1	NP_663525.1	ILMN_2755803	000070379	S	1129	CTGGCCCTGAAACCCCATCACCCATCTATCAAGAATTAAGTGTTGGTCTG	4	+	107032303-107032352	4qC7	Mus musculus Yip1 domain family, member 1 (Yipf1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C030002N13Rik	C030002N13Rik
Mus musculus	RefSeq	ILMN_190023	ILMN_246645	LOC386552	XM_001003755.1	XM_001003755.1		386552	94385909	XM_001003755.1	LOC386552	XP_001003755.1	ILMN_1223919	001410458	S	137	AAGCGCACACTCGGATTGCGAGGCTGCCAACGTTCACTGGGCGCCCCTGA					PREDICTED: Mus musculus hypothetical LOC386552 (LOC386552), mRNA.					
Mus musculus	RefSeq	ILMN_219273	ILMN_219273	SUSD3	NM_025491.3	NM_025491.3		66329	118130318	NM_025491.3	Susd3	NP_079767.2	ILMN_2706550	001690255	S	594	GCAAGCCAGGAATTCAGCACAGCCAGGCCCATGACAACCACAGCTTCACC	13	-	49332794-49332843	13qA5	Mus musculus sushi domain containing 3 (Susd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700017I11Rik; 2810440J20Rik	1700017I11Rik; 2810440J20Rik
Mus musculus	RefSeq	ILMN_216382	ILMN_216382	CRADD	NM_009950.2	NM_009950.2		12905	133892137	NM_009950.2	Cradd	NP_034080.1	ILMN_1212607	000670154	S	1287	AAATAACTCAGGCAGGATGTATAGATTAAGCATGAGACACCGAAGCTCCC	10	-	94638110-94638159	10qC2	Mus musculus CASP2 and RIPK1 domain containing adaptor with death domain (Cradd), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RAIDD	RAIDD
Mus musculus	RefSeq	ILMN_211345	ILMN_211345	PJA1	NM_008853.2	NM_008853.2		18744	50284538	NM_008853.2	Pja1	NP_032879.2	ILMN_2842877	007210521	S	1531	GTCAGCCTGGTTACATTCCCTGTCCGAAACCCACAATACTACAGGAGCCC	X	-	95668960-95669009	XqC3	Mus musculus praja1, RING-H2 motif containing (Pja1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199251	ILMN_257632	5730507C01RIK	NM_001033157.3	NM_001033157.3		236366	149363670	NM_001033157.3	5730507C01Rik	NP_001028329.1	ILMN_1226890	001070349	S	262	TCTAGCTTCACCACGAGCACGGCCCAGTGCCGGGCAACCGTGGCGGCAAT				12qA1.2	Mus musculus RIKEN cDNA 5730507C01 gene (5730507C01Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186828	ILMN_186828	SCL0003799.1_2	scl0003799.1_2	AK076154.1			26096645	AK076154.1	scl0003799.1_2		ILMN_1236010	005820192	S	2	GTGACTCTGTTCAGATCCGCAACAAGATCCTGAGAGCTGCCAGGATTCTG										
Mus musculus	RefSeq	ILMN_216861	ILMN_216861	PRLPL	NM_023746.3	NM_023746.3		28078	32129260	NM_023746.3	Prlpl	NP_076235.1	ILMN_2896505	004210328	S	694	GCACAGAAGGTTTCTGATTTCATCAGTATCCTGAGAGACCAAATTGTGCC	13	+	28158709-28158758	13qA3.1	Mus musculus prolactin-like protein L (Prlpl), mRNA.				PLP-L; RP23-231P12.2; D13Wsu14e; 1600013P04Rik	PLP-L; RP23-231P12.2; D13Wsu14e; 1600013P04Rik
Mus musculus	RefSeq	ILMN_211337	ILMN_211337	MAPK11	NM_011161.4	NM_011161.4		19094	40789283	NM_011161.4	Mapk11	NP_035291.3	ILMN_2716622	005690358	S	2241	GGCCCTGTTTGAAAACGCGTTGGGGGTGTAACGCCTCCCTGAAGAGACAA	15	-	88973016-88973065	15qE3	Mus musculus mitogen-activated protein kinase 11 (Mapk11), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 8339] [evidence ISS]	p38-2; DKFZp586C1322; Sapk2; Sapk2b; P38b; Prkm11; p38beta; p38beta2	p38-2; DKFZp586C1322; Sapk2; Sapk2b; P38b; Prkm11; p38beta; p38beta2
Mus musculus	RefSeq	ILMN_211337	ILMN_211337	MAPK11	NM_011161.4	NM_011161.4		19094	40789283	NM_011161.4	Mapk11	NP_035291.3	ILMN_2614777	006180026	S	1129	TTGAGCAGTGAGGCATTGCCTGAAGTGGGAGACCTGAGCCTGTCCCCTCT	15	-	88974128-88974167:88974168-88974177	15qE3	Mus musculus mitogen-activated protein kinase 11 (Mapk11), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 8339] [evidence ISS]	p38-2; DKFZp586C1322; Sapk2; Sapk2b; P38b; Prkm11; p38beta; p38beta2	p38-2; DKFZp586C1322; Sapk2; Sapk2b; P38b; Prkm11; p38beta; p38beta2
Mus musculus	MEEBO	ILMN_191559	ILMN_191559	3110018K01RIK	scl078356.1_225						3110018K01Rik		ILMN_2480125	000160136	S	5	CCCATTTTAAAAACGTTGTTAGTCCCAGCCGACGTTTTTGGTGATATTCC										
Mus musculus	Riken	ILMN_201836	ILMN_201836	KPNB3	ri|5730478E03|PX00004D12|AK017701|2093					AK017701	Kpnb3		ILMN_1216132	007040482	S	1906	TTGGCCCTACAGGCAAAGGAGCAGGGTGTTGGTGCAGGTCTAGGCGCTAA										
Mus musculus	Riken	ILMN_204324	ILMN_204324	5330438O12RIK	ri|5330438O12|PX00054H11|AK030621|2485					AK030621	5330438O12Rik		ILMN_1242675	002470324	S	2181	AGGAAGCTGTCTCTTGTACCCACGTGCTCAGCACTATTCCCCACTATCTC										
Mus musculus	RefSeq	ILMN_210676	ILMN_210676	GPSM1	NM_153410.2	NM_153410.2		67839	32189377	NM_153410.2	Gpsm1	NP_700459.2	ILMN_2967622	004010228	S	3113	TTACCCAGAGGGCCAGGGCAAGGGAAACTGAGGACCCAACTTCTGAGAGG	2	+	26170000-26170049	2qA3	Mus musculus G-protein signalling modulator 1 (AGS3-like, C. elegans) (Gpsm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW107933; 1810037C22Rik; Ags3	AW107933; 1810037C22Rik; Ags3
Mus musculus	RefSeq	ILMN_226600	ILMN_226600	SAP30L	NM_001081168.1	NM_001081168.1		50724	124487192	NM_001081168.1	Sap30l	NP_001074637.1	ILMN_3128784	006550608	A	1038	GTGATGAAAGGACAGCCGGGTACTGCTTGATGACAGGTGGCCTCTGCAAC	11	+	57623606-57623655	11qB1.3	Mus musculus SAP30-like (Sap30l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MGC151406; RP23-268K22.3; AF006998; MGC151408; L55; 2310079P12Rik	MGC151406; RP23-268K22.3; AF006998; MGC151408; L55; 2310079P12Rik
Mus musculus	RefSeq	ILMN_229836	ILMN_229836	RSRC2	NM_001005525.1	NM_001005525.1		208606	53988375	NM_001005525.1	Rsrc2	NP_001005525.1	ILMN_3111334	005340102	A	770	CGGACACCTAGTCCACCTCCCTTCAGAGGCAGAAACACAGCAATGGACGC	5	-	124186588-124186637	5qF	Mus musculus arginine/serine-rich coiled-coil 2 (Rsrc2), transcript variant 1, mRNA.				1500011J06Rik	1500011J06Rik
Mus musculus	RefSeq	ILMN_198387	ILMN_198387	LOC381198	XM_355128.1	XM_355128.1			38084797	XM_355128.1	LOC381198		ILMN_1218896	003370360	S	220	AGGCACAGCCTCTCACAGCAGAGCTCGTTCTGGCGTTTCAAAGCCTCCCT										
Mus musculus	Riken	ILMN_203702	ILMN_203702	9630027A13RIK	ri|9630027A13|PX00115H17|AK036011|3231					AK036011	9630027A13Rik		ILMN_1253400	006270132	S	2913	TCTGAGTGCTGGGATTACAGGCTCCCCCCCCCCCCAATCTAGGCTCCATA										
Mus musculus	RefSeq	ILMN_213678	ILMN_213678	RAB3GAP1	NM_178690.3	NM_178690.3		226407	142378206	NM_178690.3	Rab3gap1	NP_848805.1	ILMN_2639579	006580301	S	4128	GGACAGTGTTTGCTTTCCTGGGTATTGATGACAGAACTCTACAGTGTGGG	1	+	129840349-129840398	1qE3-qE4	Mus musculus RAB3 GTPase activating protein subunit 1 (Rab3gap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence ISO]	4732493F09Rik; 1700003B17Rik; Rab3gap; AL117896	4732493F09Rik; 1700003B17Rik; Rab3gap; AL117896
Mus musculus	RefSeq	ILMN_197756	ILMN_197756	LOC223645	XM_147954.2	XM_147954.2			38077822	XM_147954.2	LOC223645		ILMN_2529256	006250379	S	2009	GTTCCTACGCCGGAGCCTTGCAGGCCGATGGAGCTGTCTTGAACCTCATT										
Mus musculus	MEEBO	ILMN_209062	ILMN_209062	6330408A02RIK	scl31743.5.1_44	NM_177312.2			31343316	NM_177312.2	6330408A02Rik		ILMN_2592187	001090348	S	2756	GGGGACTGACAAGAGTAAGGATGGAGAGCCCTAGAGACTACAAGGTTGAA										
Mus musculus	RefSeq	ILMN_210071	ILMN_233809	FAT3	XM_974121.1	XM_974121.1		270120	94386884	XM_974121.1	Fat3	XP_979215.1	ILMN_2601917	002120474	S	1837	GTGGACGGAAGCCTTCTTCACAATCACTTGAGATTCTGCTCAGCCTTAGC				9qA2	PREDICTED: Mus musculus FAT tumor suppressor homolog 3 (Drosophila), transcript variant 1 (Fat3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215342	ILMN_323750	PRR12	NM_175022.2	NM_175022.2		233210	153791303	NM_175022.2	Prr12	NP_778187.2	ILMN_1233884	004890154	S	6261	CTTTCACACCCTCCCCCATTCGTGTACAGAGAAATTATTTATATATATGT				7qB4	Mus musculus proline rich 12 (Prr12), mRNA.				6720469B10; BC058674	6720469B10; BC058674
Mus musculus	RefSeq	ILMN_220783	ILMN_220783	COL9A2	NM_007741.1	NM_007741.1		12840	6680977	NM_007741.1	Col9a2	NP_031767.1	ILMN_2945030	003420156	S	2821	GGGGGAGAATACCTTGAGGTGGCAGTTCTTAGGCCAGCCCTGCTATTGCC	4	+	120727771-120727820	4qD2.2	Mus musculus collagen, type IX, alpha 2 (Col9a2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AI427499; Col9a-2	AI427499; Col9a-2
Mus musculus	Riken	ILMN_205236	ILMN_205236	E130318N20RIK	ri|E130318N20|PX00209M22|AK053893|1885					AK053893	E130318N20Rik		ILMN_2571024	006370411	S	1388	GGTTTTGAACTGTCAGTGACCCTCTTACCTGTTCTCCCGGAGTGTTGGTG										
Mus musculus	RefSeq	ILMN_193281	ILMN_219288	SETX	NM_198033.2	NM_198033.2		269254	113722130	NM_198033.2	Setx	NP_932150.2	ILMN_2495725	004040113	S	3755	GAGTAAAGCATGCATAGGGAAAGACTGCTCAGAGCATCGTAGCTTGGCAG	2	+	29002096-29002145	2qA3	Mus musculus senataxin (Setx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0625; A130090N03; Sen1; SCAR1; AOA2; Als4; A930037J23Rik; AW060766	mKIAA0625; A130090N03; Sen1; SCAR1; AOA2; Als4; A930037J23Rik; AW060766
Mus musculus	RefSeq	ILMN_219288	ILMN_219288	SETX	NM_198033.2	NM_198033.2		269254	113722130	NM_198033.2	Setx	NP_932150.2	ILMN_2706827	006270564	S	10835	GGGAATCTTTCTGTAGCTTTGTGTTTTGTATGCTCTGGATTCATAACTGG	2	+	29037856-29037905	2qA3	Mus musculus senataxin (Setx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0625; A130090N03; Sen1; SCAR1; AOA2; Als4; A930037J23Rik; AW060766	mKIAA0625; A130090N03; Sen1; SCAR1; AOA2; Als4; A930037J23Rik; AW060766
Mus musculus	RefSeq	ILMN_219402	ILMN_219402	RFX1	NM_009055.2	NM_009055.2		19724	31543581	NM_009055.2	Rfx1	NP_033081.2	ILMN_2832620	007610612	S	4038	GGCCTCCCTTCCCAGTGCTCAAAGTATCCACGCGCGTGGTAGTTTAGTGT	8	+	86986993-86987042	8qC3	Mus musculus regulatory factor X, 1 (influences HLA class II expression) (Rfx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AI385641; AI047719	AI385641; AI047719
Mus musculus	MEEBO	ILMN_191236	ILMN_191236	6030446N20RIK	scl51648.18.366_9				31342203	NM_178801	6030446N20Rik		ILMN_2477346	002480647	S	3	GAGCCCTGTGGCCTAAGGCTGAGGGGCAGCACTGTTAAGCTCATATGTGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211845	ILMN_211845	TBCB	NM_025548.1	NM_025548.1		66411	13384975	NM_025548.1	Tbcb	NP_079824.1	ILMN_2620061	005860398	S	772	CAGCTGTCACCGTAGGAGATTTCCCAGAGGAGGACTACGGGTTGGACGAG	7	-	29932999-29933048	7qB1	Mus musculus tubulin folding cofactor B (Tbcb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		CG22; 2410007D12Rik; Ckap1; CKAPI; AU041393	CG22; 2410007D12Rik; Ckap1; CKAPI; AU041393
Mus musculus	RefSeq	ILMN_210521	ILMN_210521	ANGPT1	NM_009640.3	NM_009640.3		11600	118130300	NM_009640.3	Angpt1	NP_033770.2	ILMN_2606451	000510735	S	4008	GAAAAATTAGATAACTCGAACTTTGTCTTGAAGTTTCTATTTCAATAAAA	15	-	42256289-42256338	15qB3.1	Mus musculus angiopoietin 1 (Angpt1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any vascular endothelial growth factor receptor [goid 5172] [evidence TAS]	Ang-1; 1110046O21Rik; ang1	Ang-1; 1110046O21Rik; ang1
Mus musculus	RefSeq	ILMN_210521	ILMN_210521	ANGPT1	NM_009640.3	NM_009640.3		11600	118130300	NM_009640.3	Angpt1	NP_033770.2	ILMN_1226520	004210189	S	1976	CTGAGGTCAACAGAATCGCCACTTGGGTCCAGAGAATGCCACTCACAATC	15	-	42258321-42258370	15qB3.1	Mus musculus angiopoietin 1 (Angpt1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any vascular endothelial growth factor receptor [goid 5172] [evidence TAS]	Ang-1; 1110046O21Rik; ang1	Ang-1; 1110046O21Rik; ang1
Mus musculus	MEEBO	ILMN_185148	ILMN_185148	B230343H07RIK	scl0338352.9_1				31341438	NM_177413	B230343H07Rik		ILMN_1218919	005810133	S	20	TAAAAACACATTGATCCATTTTGTTTAAATTGAACTTGTTAGATATGGCT										
Mus musculus	RefSeq	ILMN_196810	ILMN_196810	LOC241066	XM_136638.1	XM_136638.1			20850043	XM_136638.1	LOC241066		ILMN_1243570	001770403	S	2614	GGGTTCTATGTTCAGCTCTGCCCCGAGAAAACAACGACTGTTGTAATAGC										
Mus musculus	RefSeq	ILMN_200722	ILMN_241873	EG668310	XM_994191.1	XM_994191.1		668310	94406249	XM_994191.1	EG668310	XP_999285.1	ILMN_1232678	006590437	S	799	ATCGTGGGCTTGCAGTTCAGCCACCACCCGCTCTTCAGTCAGGAACACGT				19qC3	PREDICTED: Mus musculus predicted gene, EG668310 (EG668310), mRNA.					
Mus musculus	RefSeq	ILMN_198456	ILMN_241873	EG668310	XM_994191.1	XM_994191.1		668310	94406249	XM_994191.1	EG668310	XP_999285.1	ILMN_1219804	003170445	S	3929	AGATGATGGAATGGCGGCCTAAGCACCCGACACGCTGGAATCGACAGTGC				19qC3	PREDICTED: Mus musculus predicted gene, EG668310 (EG668310), mRNA.					
Mus musculus	Riken	ILMN_205358	ILMN_205358	D030030I23RIK	ri|D030030I23|PX00179P06|AK050889|1395					AK050889	D030030I23Rik		ILMN_1226430	002650541	S	1123	GGTCCTTTGCTTACATGATGAGCCCAGTAGGCTTTTTGTACTCTAGGGTC										
Mus musculus	MEEBO	ILMN_188391	ILMN_188391	G430055L02RIK	scl19485.8.1_127				31560758	NM_145520	G430055L02Rik		ILMN_1240387	001500402	S	9	GCTCCGTGCTCCCCAGCTTCCCAGGATTGAACAAGACCTGCCTATCACGT										
Mus musculus	RefSeq	ILMN_214663	ILMN_252407	CDC42BPA	XM_976135.1	XM_976135.1		226751	94364634	XM_976135.1	Cdc42bpa	XP_981229.1	ILMN_2650521	004050440	S	2907	CAGCATTCTTTCTTGGCATTTTTGAATACGCCTACCGATGCTCTGGACCA				1qH4	PREDICTED: Mus musculus Cdc42 binding protein kinase alpha, transcript variant 12 (Cdc42bpa), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The directed movement of the nucleus [goid 7097] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198464	ILMN_252407	CDC42BPA	XM_976135.1	XM_976135.1		226751	94364634	XM_976135.1	Cdc42bpa	XP_981229.1	ILMN_1259326	003170056	S	115	CTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACGCTACTGGACATCCTC				1qH4	PREDICTED: Mus musculus Cdc42 binding protein kinase alpha, transcript variant 12 (Cdc42bpa), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The directed movement of the nucleus [goid 7097] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219321	ILMN_242900	TMEM188	NM_029074.2	NM_029074.2		382030	142343892	NM_029074.2	Tmem188	NP_083350.1	ILMN_1221458	004860576	S	163	GTCTGTACAGCTACTGGTGCCTGGAACTGGCTAATAGATCCTGAGACACA	8	+	90649001-90649050	8qC3	Mus musculus transmembrane protein 188 (Tmem188), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5033428A16Rik	5033428A16Rik
Mus musculus	RefSeq	ILMN_220399	ILMN_242900	TMEM188	NM_029074.2	NM_029074.2		382030	142343892	NM_029074.2	Tmem188	NP_083350.1	ILMN_1253375	002320241	S	1532	CAATTTTTGTTAAGCCTGATACTAGATTCTGGCAACTATTATACTTTTCA	8	+	90658295-90658344	8qC3	Mus musculus transmembrane protein 188 (Tmem188), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			5033428A16Rik	5033428A16Rik
Mus musculus	Riken	ILMN_204106	ILMN_204106	A730094F08RIK	ri|A730094F08|PX00153A13|AK043417|911					AK043417	A730094F08Rik		ILMN_1233684	005670619	S	832	TCTGTGACTCCAGCTGACTTAGCCACCTGTACACATGCACAGGCACGCAC										
Mus musculus	RefSeq	ILMN_222224	ILMN_232026	E530001F21RIK	NR_002167.2	NR_002167.2		279610	95006997	NR_002167.2	E530001F21Rik		ILMN_2746531	003710685	S	305	AGGAACAAGTTGAGGCTTGGTTCATCCAGAGATCCTCAGAGGAGGAGATG	X	-	102360490-102360539	XqD	Mus musculus RIKEN cDNA E530001F21 gene (E530001F21Rik), non-coding RNA.					
Mus musculus	Riken	ILMN_205451	ILMN_205451	E330038N15RIK	ri|E330038N15|PX00318P14|AK054538|1281					AK054538	E330038N15Rik		ILMN_2572654	004760240	S	326	CAGAGATGAGGGCAGGGATCACCAAACAATCTTGAGAGCATGGGCTGTGA										
Mus musculus	RefSeq	ILMN_256017	ILMN_256017	OLFR711	NM_147035.1	NM_147035.1		259037	22128878	NM_147035.1	Olfr711	NP_667246.1	ILMN_2963526	001340072	S	888	AGTCAAGGATGCAATCAAGAAGACTCTGGGAGGTGGCCAGTGCTTCCTGC	7	-	114114919-114114968	7qE3	Mus musculus olfactory receptor 711 (Olfr711), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR103-4	MOR103-4
Mus musculus	RefSeq	ILMN_247829	ILMN_247829	ZFP639	NM_144519.2	NM_144519.2		67778	31981700	NM_144519.2	Zfp639	NP_653102.1	ILMN_2804973	007050719	S	1801	GTAGTGAGTGCTTGATGAGGTTTGGGAACGAAAGGGACTTACTCGGTCAC	3	+	32712162-32712211	3qA3	Mus musculus zinc finger protein 639 (Zfp639), mRNA.				6230400O18Rik; ZASC1; ANC-2H01	6230400O18Rik; ZASC1; ANC-2H01
Mus musculus	RefSeq	ILMN_190251	ILMN_239820	TSC2	NM_011647.2	NM_011647.2		22084	86439986	NM_011647.2	Tsc2	NP_035777.2	ILMN_1214823	002760711	S	5463	TCACAGAGTTTGTGTGAGGCCAGCAGATCCATGACTAGAGTCCTGTGGCC	17	-	24733516-24733549:24733550-24733565	17qA3.3	Mus musculus tuberous sclerosis 2 (Tsc2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; A series of reactions, mediated by the intracellular phosphoinositide 3-kinase (PI3K). PI3K cascades lie downstream of many cell surface receptor linked signaling pathways and regulate numerous cellular functions [goid 14065] [evidence IMP]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IMP]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IGI]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a higher concentration, in a concentration gradient of a specific chemical [goid 50918] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14067] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IGI]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that activates or increases the activity of a GTPase [goid 43547] [evidence IEA]; Any process that modulates the frequency, rate or extent of insulin receptor signaling [goid 46626] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IMP]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence ISO]; Any process that reduces cell size [goid 45792] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tcs2	Tcs2
Mus musculus	RefSeq	ILMN_215222	ILMN_239820	TSC2	NM_011647.2	NM_011647.2		22084	86439986	NM_011647.2	Tsc2	NP_035777.2	ILMN_2656924	004920279	S	5803	GGCAGGACTACTGTGGGATGAAAGATGCCAAGAAGTTACTGGACAAGCCC	17	-	24733176-24733225	17qA3.3	Mus musculus tuberous sclerosis 2 (Tsc2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; A series of reactions, mediated by the intracellular phosphoinositide 3-kinase (PI3K). PI3K cascades lie downstream of many cell surface receptor linked signaling pathways and regulate numerous cellular functions [goid 14065] [evidence IMP]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IMP]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IGI]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a higher concentration, in a concentration gradient of a specific chemical [goid 50918] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14067] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IGI]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that activates or increases the activity of a GTPase [goid 43547] [evidence IEA]; Any process that modulates the frequency, rate or extent of insulin receptor signaling [goid 46626] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IMP]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence ISO]; Any process that reduces cell size [goid 45792] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tcs2	Tcs2
Mus musculus	MEEBO	ILMN_210646	ILMN_210646	BC025076	scl0216829.1_190	NM_175002.1			33239400	NM_175002.1	BC025076		ILMN_2607765	004230600	S	425	CAGCGTCCGGATTCAACCCATTCTTCAAACCTCAGCGCGTCATCTTCTGA										
Mus musculus	RefSeq	ILMN_221942	ILMN_239762	MYOCD	NM_145136.4	NM_145136.4		214384	154240674	NM_145136.4	Myocd	NP_660118.3	ILMN_1218766	004830711	S	4128	GCAACTGGAGGCCCAGGGAGCCGTACTGGGACAAGTTAGAATTAGAGAAC				11qB3	Mus musculus myocardin (Myocd), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process whereby external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time [goid 1560] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45661] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	BSAC2A; Srfcp	BSAC2A; Srfcp
Mus musculus	RefSeq	ILMN_186415	ILMN_239762	MYOCD	NM_145136.4	NM_145136.4		214384	154240674	NM_145136.4	Myocd	NP_660118.3	ILMN_2626391	004570398	S	2359	GGCCATTCTTCTAGCTTCTCTTCCCCAGCTTCCAGCCTCCATCAGCCTTT				11qB3	Mus musculus myocardin (Myocd), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process whereby external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time [goid 1560] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45661] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	BSAC2A; Srfcp	BSAC2A; Srfcp
Mus musculus	RefSeq	ILMN_186415	ILMN_239762	MYOCD	NM_145136.4	NM_145136.4		214384	154240674	NM_145136.4	Myocd	NP_660118.3	ILMN_2435360	005860674	S	4794	GAGTTCTTGTTGCCCTGCGTTTGGTGAAGGCGTTGGGGACCGAGGAAGAC				11qB3	Mus musculus myocardin (Myocd), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process whereby external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time [goid 1560] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45661] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	BSAC2A; Srfcp	BSAC2A; Srfcp
Mus musculus	RefSeq	ILMN_196687	ILMN_250940	MED23	NM_027347.2	NM_027347.2		70208	61651677	NM_027347.2	Med23	NP_081623.2	ILMN_2654068	006560592	S	4687	CCAAGTTTCTACCAACGTAGGTTATGGGAGTTTTGCTTCGCTCTGAGCTC	10	+	24633155-24633204	10qA4	Mus musculus mediator complex subunit 23 (Med23), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]	Crsp3; ESTM7; Med23; 130kDa; mKIAA1216; X83317; 3000002A17Rik	Crsp3; ESTM7; Med23; 130kDa; mKIAA1216; X83317; 3000002A17Rik
Mus musculus	RefSeq	ILMN_250940	ILMN_250940	MED23	NM_027347.2	NM_027347.2		70208	61651677	NM_027347.2	Med23	NP_081623.2	ILMN_2860964	003120678	S	4667	GTGGTTCCAAGTAAGGGATGCCAAGTTTCTACCAACGTAGGTTATGGGAG	10	+	24633135-24633184	10qA4	Mus musculus mediator complex subunit 23 (Med23), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]	Crsp3; ESTM7; Med23; 130kDa; mKIAA1216; X83317; 3000002A17Rik	Crsp3; ESTM7; Med23; 130kDa; mKIAA1216; X83317; 3000002A17Rik
Mus musculus	RefSeq	ILMN_205009	ILMN_253328	LOC544718	XM_975495.1	XM_975495.1		544718	94389567	XM_975495.1	LOC544718	XP_980589.1	ILMN_1235266	005050195	S	2995	GCTGCTTTCTTTTCTTACCTGGAGATTGCACTGTGGTGGTGGCAAGGGAG					PREDICTED: Mus musculus similar to AIDA-1b, transcript variant 1 (LOC544718), mRNA.					
Mus musculus	RefSeq	ILMN_221753	ILMN_221753	IRX4	NM_018885.1	NM_018885.1		50916	9256546	NM_018885.1	Irx4	NP_061373.1	ILMN_2739872	005960546	S	1939	TAACTCCAGGAAGATGAGAAGACCGGAGAGCACAGCCGATGGGAGGCCCC	13	+	73406708-73406757	13qC1	Mus musculus Iroquois related homeobox 4 (Drosophila) (Irx4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence ISS]		
Mus musculus	RefSeq	ILMN_215852	ILMN_215852	ACOT8	NM_133240.1	NM_133240.1		170789	18875407	NM_133240.1	Acot8	NP_573503.1	ILMN_1250358	001030079	S	204	ACTGGGTACCTACCTCCCAGCGGCTCTTTGGGGGTCAAATTATGGGCCAG	2	-	164628563-164628612	2qH3	Mus musculus acyl-CoA thioesterase 8 (Acot8), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]	Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IDA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: choloyl-CoA + H2O = cholate + CoA [goid 33882] [evidence IEA]	Pte1; PTE-2	Pte1; PTE-2
Mus musculus	RefSeq	ILMN_215852	ILMN_215852	ACOT8	NM_133240.1	NM_133240.1		170789	18875407	NM_133240.1	Acot8	NP_573503.1	ILMN_2983587	001240187	S	970	CTGTGCCCAGGAGGGTGTGATCCGATTGAAGCCTCAGGTGTCAGAGAGTA	2	-	164618390-164618391:164618392-164618439	2qH3	Mus musculus acyl-CoA thioesterase 8 (Acot8), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]	Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IDA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: choloyl-CoA + H2O = cholate + CoA [goid 33882] [evidence IEA]	Pte1; PTE-2	Pte1; PTE-2
Mus musculus	RefSeq	ILMN_215852	ILMN_215852	ACOT8	NM_133240.1	NM_133240.1		170789	18875407	NM_133240.1	Acot8	NP_573503.1	ILMN_2738629	007200243	S	825	CGTCACTGGATCACTCCATGTGGTTTCATGCCCCATTCCGAGCCGACCAC	2	-	164620509-164620558	2qH3	Mus musculus acyl-CoA thioesterase 8 (Acot8), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]	Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IDA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: choloyl-CoA + H2O = cholate + CoA [goid 33882] [evidence IEA]	Pte1; PTE-2	Pte1; PTE-2
Mus musculus	RefSeq	ILMN_223684	ILMN_223684	ABHD8	NM_022419.1	NM_022419.1		64296	11967946	NM_022419.1	Abhd8	NP_071864.1	ILMN_3002505	002320647	S	1590	GCATGCCCCAGAGCGAACCAGGCACAGTCAGTGTTGGAGACTCAGTGCCC	8	-	74386023-74386072	8qB3.3	Mus musculus abhydrolase domain containing 8 (Abhd8), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AB030191; 0910001L24Rik	AB030191; 0910001L24Rik
Mus musculus	Riken	ILMN_205151	ILMN_205151	A130084P08RIK	ri|A130084P08|PX00125L14|AK038183|2757					AK038183	A130084P08Rik		ILMN_1243449	004390142	S	2441	GCTTTTCCGTTCTGCTCTCACAGGCGTTGACATTTCAGGAGCTGTCCCTC										
Mus musculus	RefSeq	ILMN_213193	ILMN_213193	BC018465	NM_144890.1	NM_144890.1		228802	21450266	NM_144890.1	BC018465	NP_659139.1	ILMN_1227845	002510474	S	1522	CATGGTCAAGAGCTCAAAGCCCAAGATCAGCGGCGGTCTCAGTGGAGTCC	2	+	154066561-154066610	2qH1	Mus musculus cDNA sequence BC018465 (BC018465), mRNA.				MGC27784	MGC27784
Mus musculus	RefSeq	ILMN_184640	ILMN_228902	TOMM6	NM_025365.2	NM_025365.2		66119	31982675	NM_025365.2	Tomm6	NP_079641.1	ILMN_1236123	002940747	S	724	GAGCAGCTCTCCTGTGTTTCCCCGTTTCTGATGCTGTTATCTGCTTACAG	17	-	47823952-47824001	17qC	Mus musculus translocase of outer mitochondrial membrane 6 homolog (yeast) (Tomm6), nuclear gene encoding mitochondrial protein, mRNA.				AI663970	AI663970
Mus musculus	RefSeq	ILMN_221576	ILMN_221576	MOXD1	NM_021509.3	NM_021509.3		59012	32129276	NM_021509.3	Moxd1	NP_067484.2	ILMN_2977492	000070646	S	2712	CTACCCTCTGGGTCGATCTGAGTCCCATGTCCTATAACAGATTCATTTTT	10	+	23991828-23991877	10qA4	Mus musculus monooxygenase, DBH-like 1 (Moxd1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3,4-dihydroxyphenethylamine + ascorbate + O2 = noradrenaline + dehydroascorbate + H2O [goid 4500] [evidence IEA]	MNCb-5203; 3230402N08Rik	MNCb-5203; 3230402N08Rik
Mus musculus	RefSeq	ILMN_218469	ILMN_218469	SH3GL1	NM_013664.2	NM_013664.2		20405	118130840	NM_013664.2	Sh3gl1	NP_038692.1	ILMN_1243908	005080136	S	1883	TTATCCCTGGCACGTGGGGCCACACCCCACGCCCCCTGGATAGGCAACAC	17	-	56156254-56156303	17qD	Mus musculus SH3-domain GRB2-like 1 (Sh3gl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SH3P8; Sh3d2b; EEN; C77078	SH3P8; Sh3d2b; EEN; C77078
Mus musculus	RefSeq	ILMN_198935	ILMN_261110	AA407270	NM_001033208.3	NM_001033208.3		102371	146198729	NM_001033208.3	AA407270	NP_001028380.1	ILMN_2533447	005270661	S	1374	TGGAGTGGGGTGTGATCTTCTTCCCAGCCCAACAGGCAGGACTCGTGAAA				9qD	Mus musculus expressed sequence AA407270 (AA407270), mRNA.				AV006038	AV006038
Mus musculus	RefSeq	ILMN_220782	ILMN_220782	KCNA1	NM_010595.3	NM_010595.3		16485	119395751	NM_010595.3	Kcna1	NP_034725.3	ILMN_1237059	000520593	S	4656	GATGGGGACAATCCCTTTTCGGAGCTCAAAGCATGTTCTCTTAGTCAGCA	6	-	126590745-126590794	6qF3	Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 1 (Kcna1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Shak; Kca1-1; MBK1; Kv1.1; Mk-1; AI840627; mceph; MGC124402	Shak; Kca1-1; MBK1; Kv1.1; Mk-1; AI840627; mceph; MGC124402
Mus musculus	RefSeq	ILMN_222943	ILMN_222943	HINT3	NM_025798.2	NM_025798.2		66847	31981180	NM_025798.2	Hint3	NP_080074.1	ILMN_2972627	002000301	S	277	GAAATGGTCGAGAGCATGGTGGCTGCTGGGAAAACCATGCTTGAGAGGAA	10	-	30301089-30301133:30304129-30304133	10qA4	Mus musculus histidine triad nucleotide binding protein 3 (Hint3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HINT-4; 0610010I17Rik; HINT4	HINT-4; 0610010I17Rik; HINT4
Mus musculus	Riken	ILMN_206490	ILMN_206490	D430036J24RIK	ri|D430036J24|PX00194P18|AK085099|2559					AK085099	D430036J24Rik		ILMN_1254397	004880477	S	1370	TGTGGGGGCACTTTATGCTGTGGGAGGCACCACTACAATTGAGAAGTATG										
Mus musculus	RefSeq	ILMN_247171	ILMN_247171	GM249	NM_001045521.1	NM_001045521.1		216797	113865888	NM_001045521.1	Gm249	NP_001038986.1	ILMN_3002543	005910470	S	985	TTTTGTGAGGACGGAGACGCCCACCCACTTGAGCTGCCACATGCCCTGTT	11	-	59186375-59186417:59186418-59186424	11qB1.3	Mus musculus gene model 249, (NCBI) (Gm249), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	Riken	ILMN_205818	ILMN_205818	A430060D24RIK	ri|A430060D24|PX00137A12|AK040099|3393					AK040099	A430060D24Rik		ILMN_1248730	005390278	S	3264	GCTGCTTGCTGTGGATGCCATGACCATTGAAAGACCCCTTTGGAGCCTTC										
Mus musculus	RefSeq	ILMN_213306	ILMN_213306	AIFM2	NM_178058.3	NM_178058.3		71361	118130271	NM_178058.3	Aifm2	NP_835159.1	ILMN_3053415	007320504	I	1270	TGTGGAAGAGAGGCCCTTTGTAAAGAGAATATAAAATGCACCGGACCCCT	10	+	61201836-61201885	10qB4	Mus musculus apoptosis-inducing factor, mitochondrion-associated 2 (Aifm2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PRG3; Amid; D730001I10Rik; 5430437E11Rik	PRG3; Amid; D730001I10Rik; 5430437E11Rik
Mus musculus	RefSeq	ILMN_213306	ILMN_213306	AIFM2	NM_178058.3	NM_178058.3		71361	118130271	NM_178058.3	Aifm2	NP_835159.1	ILMN_3130133	004260386	A	973	GTTGCCGTGGCCAACATCGTCAACTCCATGAAGCAGAGGCCACTCAAAGC	10	+	61198346-61198395	10qB4	Mus musculus apoptosis-inducing factor, mitochondrion-associated 2 (Aifm2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PRG3; Amid; D730001I10Rik; 5430437E11Rik	PRG3; Amid; D730001I10Rik; 5430437E11Rik
Mus musculus	RefSeq	ILMN_213777	ILMN_213777	MEPE	NM_053172.1	NM_053172.1		94111	16716458	NM_053172.1	Mepe	NP_444402.1	ILMN_1222230	006980709	S	1202	CTTACACCGAATAAAGGGATGTCACAGCGGAGAGGCTCCTGGCCTTCGAG	5	+	104767197-104767246	5qE5	Mus musculus matrix extracellular phosphoglycoprotein with ASARM motif (bone) (Mepe), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence ISO]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization [goid 30502] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	OF45	OF45
Mus musculus	RefSeq	ILMN_190336	ILMN_190336	VPREB3	NM_009514.4	NM_009514.4		22364	145966877	NM_009514.4	Vpreb3	NP_033540.1	ILMN_2469253	004900500	S	306	TCTCAGCTACCGTGGATGCAGCCCACAACGCCTGTATCCTCACCATCAGC				10qC1	Mus musculus pre-B lymphocyte gene 3 (Vpreb3), mRNA.				8HS-20; Vpreb-3; AI528709	8HS-20; Vpreb-3; AI528709
Mus musculus	RefSeq	ILMN_201542	ILMN_201542	RAET1B	NM_009017.1	NM_009017.1		19369	6679618	NM_009017.1	Raet1b	NP_033043.1	ILMN_3158725	000050025	A	489	GTCACCATGATTTATCCGCAAAGCCAGGGCCGAACTCCTAGTGCCACCTG	10	+	22060812-22060861		Mus musculus retinoic acid early transcript beta (Raet1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence IDA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of an immune response to tumor cell [goid 2839] [evidence IDA]; Any process that stimulates, induces or increases the rate of macrophage activation [goid 43032] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; The process of causing a cell to become susceptible to natural killer cell mediated cytotoxicity [goid 42271] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer cell activation [goid 32816] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]	RAE-1beta	RAE-1beta
Mus musculus	RefSeq	ILMN_201542	ILMN_201542	RAET1B	NM_009017.1	NM_009017.1		19369	6679618	NM_009017.1	Raet1b	NP_033043.1	ILMN_1245816	004670050	S	1162	TGGCCAGTTATCACATCGTTTGTAGCAATGTATGATGGAGGACGTCCAGG	10	+	22063461-22063510		Mus musculus retinoic acid early transcript beta (Raet1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence IDA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of an immune response to tumor cell [goid 2839] [evidence IDA]; Any process that stimulates, induces or increases the rate of macrophage activation [goid 43032] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; The process of causing a cell to become susceptible to natural killer cell mediated cytotoxicity [goid 42271] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer cell activation [goid 32816] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]	RAE-1beta	RAE-1beta
Mus musculus	RefSeq	ILMN_201542	ILMN_201542	RAET1B	NM_009017.1	NM_009017.1		19369	6679618	NM_009017.1	Raet1b	NP_033043.1	ILMN_3079461	000010541	I	1166	CAGTTATCACATCGTTTGTAGCAATGTATGATGGAGGACGTCCAGGTCCA	10	+	22063465-22063514		Mus musculus retinoic acid early transcript beta (Raet1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence IDA]	The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of an immune response to tumor cell [goid 2839] [evidence IDA]; Any process that stimulates, induces or increases the rate of macrophage activation [goid 43032] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; The process of causing a cell to become susceptible to natural killer cell mediated cytotoxicity [goid 42271] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer cell activation [goid 32816] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IDA]	Interacting selectively with a lectin-like natural killer cell receptor [goid 46703] [evidence IDA]	RAE-1beta	RAE-1beta
Mus musculus	RefSeq	ILMN_219556	ILMN_219556	A930008G19RIK	NM_175268.4	NM_175268.4		77938	47059505	NM_175268.4	A930008G19Rik	NP_780477.2	ILMN_2710429	002230341	S	4731	ATGAACTGCATCGTCAGTGTTTGGGGGCACCCAGGGGTCAGGGACAGATG	7	-	139904054-139904103	7qF3	Mus musculus RIKEN cDNA A930008G19 gene (A930008G19Rik), mRNA.				mKIAA0140; MGC40647	mKIAA0140; MGC40647
Mus musculus	RefSeq	ILMN_190433	ILMN_321329	6720475J19RIK	XM_001474896.1	XM_001474896.1		68157	149270376	XM_001474896.1	6720475J19Rik	XP_001474946.1	ILMN_2470131	005720743	S	402	CGGAGCAGGTTCAGAACCACGGTGGATTTTGGAATTCCGAGAGCATGCTG	19	-	9911210-9911259	19qA	PREDICTED: Mus musculus RIKEN cDNA 6720475J19 gene (6720475J19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221325	ILMN_221325	OLFR438	NM_146654.1	NM_146654.1		258648	33238917	NM_146654.1	Olfr438	NP_666865.1	ILMN_1236006	005090091	S	447	ATTTAGCTTTCTTCTGGCTCTGGTCCATTTGGTCCTCATCCTGAGGCTGC	6	+	43103752-43103801	6qB2.1	Mus musculus olfactory receptor 438 (Olfr438), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR261-4	MOR261-4
Mus musculus	RefSeq	ILMN_187359	ILMN_187359	V1RA2	NM_011684.2	NM_011684.2		22297	110665735	NM_011684.2	V1ra2	NP_035814.2	ILMN_2493980	007550242	S	3076	GATGGACAGACTTTCAATTCAGCAGAGAAACAAGTGTCATAAATATGTGT	6	-	89881767-89881816	6qD1	Mus musculus vomeronasal 1 receptor, A2 (V1ra2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]	V1r2; V1ra11; mV1R2; V1RA9	V1r2; V1ra11; mV1R2; V1RA9
Mus musculus	RefSeq	ILMN_187359	ILMN_187359	V1RA2	NM_011684.2	NM_011684.2		22297	110665735	NM_011684.2	V1ra2	NP_035814.2	ILMN_2443447	000130653	S	617	CCCAAAATATAGTAAAACTACCTGTAATGTTCCCGGAAGTGCAGAAGTTG	6	-	89884226-89884275	6qD1	Mus musculus vomeronasal 1 receptor, A2 (V1ra2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]	V1r2; V1ra11; mV1R2; V1RA9	V1r2; V1ra11; mV1R2; V1RA9
Mus musculus	RefSeq	ILMN_187359	ILMN_187359	V1RA2	NM_011684.2	NM_011684.2		22297	110665735	NM_011684.2	V1ra2	NP_035814.2	ILMN_1249741	001850672	S	602	CCTCATTAAAACTCACCCAAAATATAGTAAAACTACCTGTAATGTTCCCG	6	-	89884241-89884290	6qD1	Mus musculus vomeronasal 1 receptor, A2 (V1ra2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]	V1r2; V1ra11; mV1R2; V1RA9	V1r2; V1ra11; mV1R2; V1RA9
Mus musculus	RefSeq	ILMN_186051	ILMN_233633	EG623230	XM_887671.3	XM_887671.3		623230	149253160	XM_887671.3	EG623230	XP_892764.2	ILMN_1245858	001470471	S	1725	GACAGATGTGGCTGTAGTGTTTAGGTGTTTGGTCTTGCTTCTTGTATGGC	4	+	131479410-131479459	4qD2.3	PREDICTED: Mus musculus predicted gene, EG623230 (EG623230), mRNA.					
Mus musculus	RefSeq	ILMN_236446	ILMN_236446	MAD2L1	NM_019499.2	NM_019499.2		56150	31543217	NM_019499.2	Mad2l1	NP_062372.2	ILMN_2778872	001410189	S	1304	GTGGCCTACAAAACCCCATCAATGAAGAGACGGTACACATACCATCCCCC	6	+	66470148-66470197	6qC1	Mus musculus MAD2 (mitotic arrest deficient, homolog)-like 1 (yeast) (Mad2l1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The microtubule organizing center in fungi; functionally homologous to the animal cell centrosome [goid 5816] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IDA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IMP]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence IMP]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of the mitotic metaphase to anaphase transition [goid 45841] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MAD2; MGC113763; AA673185	MAD2; MGC113763; AA673185
Mus musculus	RefSeq	ILMN_223178	ILMN_242899	VPS13B	XM_981678.1	XM_981678.1		328525	94398529	XM_981678.1	Vps13b	XP_986772.1	ILMN_1239303	000060477	S	1799	GGGCCAGAAACTATAATCATCTTTGATCTTCAGTAGCATAGTAAGTGGCC					PREDICTED: Mus musculus vacuolar protein sorting 13B (yeast), transcript variant 2 (Vps13b), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_194116	ILMN_248163	PSMD9	NM_026000.2	NM_026000.2		67151	119508440	NM_026000.2	Psmd9	NP_080276.2	ILMN_2593662	000450626	S	1071	GGCGAGTAATGATTTGATGTCATTTTCCTTTTGGAGACGGACTCAGTGTG	5	+	123698614-123698663	5qF	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 (Psmd9), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any of the basic Helix-Loop-Helix (bHLH) superfamily of transcription factors, important regulatory components in transciptional networks of many developmental pathways [goid 43425] [evidence ISS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISS]	2610202L11Rik; P27; Bridge-1; 1500011J20Rik	2610202L11Rik; P27; Bridge-1; 1500011J20Rik
Mus musculus	RefSeq	ILMN_194116	ILMN_248163	PSMD9	NM_026000.2	NM_026000.2		67151	119508440	NM_026000.2	Psmd9	NP_080276.2	ILMN_2594811	001980491	S	431	AAGAGAAGCAGGCTCGGGACATGGCTGAAGCCCGAGAAGAGGCCATGAAC	5	+	123689623-123689672	5qF	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 9 (Psmd9), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any of the basic Helix-Loop-Helix (bHLH) superfamily of transcription factors, important regulatory components in transciptional networks of many developmental pathways [goid 43425] [evidence ISS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISS]	2610202L11Rik; P27; Bridge-1; 1500011J20Rik	2610202L11Rik; P27; Bridge-1; 1500011J20Rik
Mus musculus	RefSeq	ILMN_209973	ILMN_209973	E130311K13RIK	NM_177856.4	NM_177856.4		329659	146198832	NM_177856.4	E130311K13Rik	NP_808524.1	ILMN_2600983	006350438	S	1448	GAAGAGGAAGTTTAAGTATCGACTGTTATATTAGTTGTCTAGGACAGCCA				3qE1	Mus musculus RIKEN cDNA E130311K13 gene (E130311K13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_202775	ILMN_202775	5830419M17RIK	ri|5830419M17|PX00039K07|AK020015|2508					AK020015	5830419M17Rik		ILMN_1228801	001170577	S	2455	CTGGGATGTGGCTTGTGCTGGTATGTGGCTCTATCAATCAGACACCTTGC										
Mus musculus	RefSeq	ILMN_238075	ILMN_238075	GM266	NM_001033248.1	NM_001033248.1		212539	75677503	NM_001033248.1	Gm266	NP_001028420.1	ILMN_2989204	002260255	S	470	GCCCGTTCCTGGAAATCACGACCAAGAGCAAAACGATGGTGGACCGCGTG	12	-	111933085-111933134	12qF1	Mus musculus gene model 266, (NCBI) (Gm266), mRNA.			Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185173	ILMN_248038	ANKRD42	NM_028665.3	NM_028665.3		73845	146141126	NM_028665.3	Ankrd42	NP_082941.1	ILMN_2607187	002750097	S	3237	GCCTGCAAGGGCTACGGTTCATTGTGCATTCTTTTTAAAGTATATTGTAC				7qE1	Mus musculus ankyrin repeat domain 42 (Ankrd42), mRNA.				4931426M20; 4933417L02Rik	4931426M20; 4933417L02Rik
Mus musculus	Riken	ILMN_205661	ILMN_205661	TLE1	ri|B230380C18|PX00161B19|AK046402|2066					AK046402	Tle1		ILMN_1245089	002490327	S	1623	GCAGCTGTGGGGTTTTTCCGATCTTGCTAGCCCGCAGGCATCTTGACATC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]		
Mus musculus	Riken	ILMN_206494	ILMN_206494	D430050I15RIK	ri|D430050I15|PX00195J15|AK085186|2897					AK085186	D430050I15Rik		ILMN_2580504	007100750	S	2765	TAAGCTGTCTGCAGTTTCATCAATTGGGAAGTGTTTTGGAATGCCAGTAG										
Mus musculus	RefSeq	ILMN_242109	ILMN_242109	EG434396	NM_001033783.2	NM_001033783.2		434396	142381555	NM_001033783.2	EG434396	NP_001028955.1	ILMN_3161549	003840463	S	1401	GTGAGGCTCTAATGTGTCACCACCAGCTTCTCCTATGGACTGGATGTGTG	9	-	36340879-36340928	9qA4	Mus musculus predicted gene, EG434396 (EG434396), mRNA.					
Mus musculus	RefSeq	ILMN_222878	ILMN_222878	KLF9	NM_010638.4	NM_010638.4		16601	146134344	NM_010638.4	Klf9	NP_034768.2	ILMN_1254031	004210327	S	2672	TCACTGTCTGCATCAGTATCCCTACCACTACTTAGCTTGTATCTAGGTGT				19qB	Mus musculus Kruppel-like factor 9 (Klf9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any series of molecular signals generated as a consequence of a progesterone binding to its receptor [goid 50847] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	BTEB-1; Bteb1; AA589643	BTEB-1; Bteb1; AA589643
Mus musculus	RefSeq	ILMN_217329	ILMN_217329	TCFAP2E	NM_198960.2	NM_198960.2		332937	120444919	NM_198960.2	Tcfap2e	NP_945198.2	ILMN_1221831	007560148	S	1654	GCCTTGGCTCCTGGGGGTAAAATGTGGGATTCTATTCAGGCCAGAGAGAA	4	-	126393660-126393709	4qD2.2	Mus musculus transcription factor AP-2, epsilon (Tcfap2e), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	AI505200; AP-2e	AI505200; AP-2e
Mus musculus	RefSeq	ILMN_221299	ILMN_221299	TESK1	NM_011571.2	NM_011571.2		21754	31543856	NM_011571.2	Tesk1	NP_035701.2	ILMN_1231930	004890402	S	3841	GAGTGCTGGAGGAATAGCAGTCTTAAAAATTGGCAGGCCGTAGGTTAAGG	4	+	43460830-43460879	4qB1	Mus musculus testis specific protein kinase 1 (Tesk1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI326901	AI326901
Mus musculus	RefSeq	ILMN_240761	ILMN_240761	GABRB3	NM_001038701.1	NM_001038701.1		14402	84662773	NM_001038701.1	Gabrb3	NP_001033790.1	ILMN_3120335	007210192	A	5170	CCCAGAGTGGCTCATGCACCATAGCTCTCCTAGGGACGGCCCACAAACAT	7	+	65083842-65083891	7qC	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3 (Gabrb3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence ISO]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence ISO]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]	A230092K12Rik; Gabrb-3; AW049585; Cp1	A230092K12Rik; Gabrb-3; AW049585; Cp1
Mus musculus	RefSeq	ILMN_191191	ILMN_240761	GABRB3	NM_001038701.1	NM_001038701.1		14402	84662773	NM_001038701.1	Gabrb3	NP_001033790.1	ILMN_2476948	004640653	S	5265	TCAAGGTAAGTACAGGATTGTTCTCGTAGGAATAGGCGGTTGCTGTCCTG	7	+	65083937-65083986	7qC	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3 (Gabrb3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence ISO]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence ISO]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]	A230092K12Rik; Gabrb-3; AW049585; Cp1	A230092K12Rik; Gabrb-3; AW049585; Cp1
Mus musculus	RefSeq	ILMN_240761	ILMN_240761	GABRB3	NM_001038701.1	NM_001038701.1		14402	84662773	NM_001038701.1	Gabrb3	NP_001033790.1	ILMN_3044905	005910082	I	3	TTCCCACTCAGGTTAGGCTAGAGGAGCAGCGCCATGTGCTCCGGGCTCCA	7	+	64845906-64845938:64845939-64845955	7qC	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3 (Gabrb3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence ISO]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence ISO]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]	A230092K12Rik; Gabrb-3; AW049585; Cp1	A230092K12Rik; Gabrb-3; AW049585; Cp1
Mus musculus	RefSeq	ILMN_191191	ILMN_240761	GABRB3	NM_001038701.1	NM_001038701.1		14402	84662773	NM_001038701.1	Gabrb3	NP_001033790.1	ILMN_1255861	004010452	S	3036	AATTAATAACCCCCAAATCCCACACACGCGGCACCTTCAAGTCTGGCGCC	7	+	65081708-65081757	7qC	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3 (Gabrb3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence ISO]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence ISO]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]	A230092K12Rik; Gabrb-3; AW049585; Cp1	A230092K12Rik; Gabrb-3; AW049585; Cp1
Mus musculus	RefSeq	ILMN_199753	ILMN_199753	LOC386516	XM_359365.1	XM_359365.1			38076815	XM_359365.1	LOC386516		ILMN_2536359	006520243	S	3	GTCGGGGAAAAAAGAAACTGCACTTATCAACTGCAGTTATACGAATGCAG										
Mus musculus	RefSeq	ILMN_190434	ILMN_246330	XDH	NM_011723.2	NM_011723.2		22436	77682554	NM_011723.2	Xdh	NP_035853.2	ILMN_1239055	005340577	S	4061	GAAAAGGAGGCTCCCCAGTATGGTTTTATACTACAGCCCTGATTCCTCGG	17	-	74233724-74233772:74233773-74233773	17qE2	Mus musculus xanthine dehydrogenase (Xdh), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IDA]; Any process that modulates the frequency, rate or extent of epithelial cell differentiation [goid 30856] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]	Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with molybdenum (Mo) ions [goid 30151] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: xanthine + H2O + O2 = urate + H2O2 [goid 4855] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IDA]; Catalysis of the reaction: xanthine + NAD+ + H2O = urate + NADH + H+ [goid 4854] [evidence IDA]	Xor; XO; Xox-1; Xox1	Xor; XO; Xox-1; Xox1
Mus musculus	RefSeq	ILMN_219504	ILMN_219504	ADAM33	NM_033615.1	NM_033615.1		110751	23956237	NM_033615.1	Adam33	NP_291093.1	ILMN_2709760	005890477	S	2545	ATACCCCTGGGCAGTGTGCATCCGGTGGAGTTTGGCTCCATCATCACTGG	2	-	130877232-130877281	2qF1	Mus musculus a disintegrin and metallopeptidase domain 33 (Adam33), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence NAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42035] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]	Adaml	Adaml
Mus musculus	RefSeq	ILMN_187947	ILMN_187947	ZFYVE1	NM_183154.2	NM_183154.2		217695	110625852	NM_183154.2	Zfyve1	NP_898977.2	ILMN_2859712	004850241	S	3575	GAGTCCAGAAGGAATTGGTCTCCCCTGTAGGCCGTGACGTTTCTGTCTCC				12qD1	Mus musculus zinc finger, FYVE domain containing 1 (Zfyve1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TAFF1; G630053K23; mKIAA1589; ZNFN2A1; DFCP1	TAFF1; G630053K23; mKIAA1589; ZNFN2A1; DFCP1
Mus musculus	RefSeq	ILMN_219718	ILMN_219718	RPS14	NM_020600.3	NM_020600.3		20044	142362340	NM_020600.3	Rps14	NP_065625.2	ILMN_2712642	002690315	S	450	CTGATAGCACTCGAAGAAAAGGGGGTCGTCGTGGTCGCCGTCTGTGAACA	18	+	60938106-60938152:60938153-60938155	18qE1	Mus musculus ribosomal protein S14 (Rps14), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC86125; AL023078; 2600014J02Rik	MGC86125; AL023078; 2600014J02Rik
Mus musculus	RefSeq	ILMN_216195	ILMN_216195	1110034A24RIK	NM_027269.3	NM_027269.3		109065	66793420	NM_027269.3	1110034A24Rik	NP_081545.3	ILMN_2972929	000010707	S	2101	CCTGCTGGGCTTCAAGGAAAGGGAAAAGGAGTCAGAGAAGGCTGTCCTCT	12	-	70291313-70291362	12qC2	Mus musculus RIKEN cDNA 1110034A24 gene (1110034A24Rik), mRNA.				AV032410; 2810020C19Rik	AV032410; 2810020C19Rik
Mus musculus	Riken	ILMN_203693	ILMN_203693	9630011E01RIK	ri|9630011E01|PX00114P18|AK035855|2927					AK035855	9630011E01Rik		ILMN_1219194	002100592	S	2403	GTCCTGGCATAAGCACTGGAACCCAAGATCCTCCGCTAGAGCAGCCAGTG										
Mus musculus	RefSeq	ILMN_200928	ILMN_200928	LOC385473	XM_358248.1	XM_358248.1			38087118	XM_358248.1	LOC385473		ILMN_1215945	002000475	S	279	GCTCTGCTGGGCTCAGAAGGAAGATGGCAGGGTGGAAATCTCACTTTCAA										
Mus musculus	RefSeq	ILMN_212166	ILMN_212166	NAPA	NM_025898.3	NM_025898.3		108124	146135022	NM_025898.3	Napa	NP_080174.1	ILMN_1216812	001050762	S	135	GCTCATCCAAAATAGAGGAAGCATGCGAGATCTATGCCAGAGCGGCGAAC				7qA2	Mus musculus N-ethylmaleimide sensitive fusion protein attachment protein alpha (Napa), mRNA.	A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 1a (or orthologs thereof) [goid 70044] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IMP]	Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence ISO]	1500039N14Rik; SNARE; RA81; AW209189; hyh; a-SNAP; SNAPA	1500039N14Rik; SNARE; RA81; AW209189; hyh; a-SNAP; SNAPA
Mus musculus	RefSeq	ILMN_212166	ILMN_212166	NAPA	NM_025898.3	NM_025898.3		108124	146135022	NM_025898.3	Napa	NP_080174.1	ILMN_2623531	003990114	S	1855	CAAGAAGCCTTGTGAGAATGTCCCAGCCTGCTGCTCTGGTTAGGCTGAGG				7qA2	Mus musculus N-ethylmaleimide sensitive fusion protein attachment protein alpha (Napa), mRNA.	A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 1a (or orthologs thereof) [goid 70044] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IMP]	Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence ISO]	1500039N14Rik; SNARE; RA81; AW209189; hyh; a-SNAP; SNAPA	1500039N14Rik; SNARE; RA81; AW209189; hyh; a-SNAP; SNAPA
Mus musculus	RefSeq	ILMN_219132	ILMN_219132	DKK3	NM_015814.2	NM_015814.2		50781	31560475	NM_015814.2	Dkk3	NP_056629.1	ILMN_2852957	002680189	S	3138	GAACCCTCTGAAAACTCTTGGCCTCATAGAAATGTGCAGAGGTGTGTCAC	7	-	119259702-119259751	7qF1	Mus musculus dickkopf homolog 3 (Xenopus laevis) (Dkk3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]		AW061014; C87148	AW061014; C87148
Mus musculus	RefSeq	ILMN_219132	ILMN_219132	DKK3	NM_015814.2	NM_015814.2		50781	31560475	NM_015814.2	Dkk3	NP_056629.1	ILMN_1224173	006860445	S	21	TGCTCTGTGGCAGCCCAGCTACCGGTCGTGACCAGATCCAGCTTGCAGCT	7	-	119302501-119302550	7qF1	Mus musculus dickkopf homolog 3 (Xenopus laevis) (Dkk3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]		AW061014; C87148	AW061014; C87148
Mus musculus	RefSeq	ILMN_219132	ILMN_219132	DKK3	NM_015814.2	NM_015814.2		50781	31560475	NM_015814.2	Dkk3	NP_056629.1	ILMN_2746556	003180682	S	3228	GCTATGTGCTAAGTCTTCCACATAAGAGCACCGAGTACCTCTTAAACGCC	7	-	119259612-119259661	7qF1	Mus musculus dickkopf homolog 3 (Xenopus laevis) (Dkk3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]		AW061014; C87148	AW061014; C87148
Mus musculus	RefSeq	ILMN_220822	ILMN_220822	BMX	NM_009759.2	NM_009759.2		12169	31981879	NM_009759.2	Bmx	NP_033889.1	ILMN_2857997	003180014	S	2658	GCTTCTTGCTTACAATTCAAGATGTGAGCTCTCAGAAGCTGAAAAGGTGG	X	-	159537244-159537293	XqF5	Mus musculus BMX non-receptor tyrosine kinase (Bmx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Etk; Etk/Bmx; Tyro8	Etk; Etk/Bmx; Tyro8
Mus musculus	RefSeq	ILMN_220822	ILMN_220822	BMX	NM_009759.2	NM_009759.2		12169	31981879	NM_009759.2	Bmx	NP_033889.1	ILMN_2857993	006400369	S	2584	AGGTATGGGCTTGATGGAGGAATGATGTCAATGGAGCGGGCTGTGAGAGC	X	-	159537318-159537367	XqF5	Mus musculus BMX non-receptor tyrosine kinase (Bmx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Etk; Etk/Bmx; Tyro8	Etk; Etk/Bmx; Tyro8
Mus musculus	RefSeq	ILMN_209241	ILMN_209241	SFTPA1	NM_023134.4	NM_023134.4		20387	145301609	NM_023134.4	Sftpa1	NP_075623.2	ILMN_1222496	000630332	S	2462	CAACAGCCTAAAGCTTTAAAAGTTCACATTGCCCCATTTCCTCTTGGGTC				14qB	Mus musculus surfactant associated protein A1 (Sftpa1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; Any process that modulates the surface tension of a liquid. Surface tension is the property that makes a liquid behave as if it had an elastic skin on its surface at the interface with a gas or an immiscible liquid [goid 50828] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Sftp1; Sftp-1; SP-A	Sftp1; Sftp-1; SP-A
Mus musculus	RefSeq	ILMN_216482	ILMN_216482	KRT71	NM_019956.1	NM_019956.1		56735	9910293	NM_019956.1	Krt71	NP_064340.1	ILMN_2828009	003060095	S	1904	TGGGCTTCCTCGTCTGCTGAGCTTTTGTCCCAGCTCCTGTGTACAACACA	15	-	101564600-101564649	15qF2	Mus musculus keratin 71 (Krt71), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence TAS]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence TAS]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]	mK6irs; AA589543; Cu; Krt2-6g; mK6irs1; Ca	mK6irs; AA589543; Cu; Krt2-6g; mK6irs1; Ca
Mus musculus	RefSeq	ILMN_223660	ILMN_257002	B230312I18RIK	XM_001002154.1	XM_001002154.1		233058	94379819	XM_001002154.1	B230312I18Rik	XP_001002154.1	ILMN_1247404	001710286	S	3167	CTTAAAAGTAAAGTAGCCCTCAGACTGGTTGATGCTCTCCGAGATCACTG				7qB1	PREDICTED: Mus musculus RIKEN cDNA B230312I18 gene, transcript variant 3 (B230312I18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_193502	ILMN_241816	SSB	NM_009278.3	NM_009278.3		20823	145966775	NM_009278.3	Ssb	NP_033304.1	ILMN_2729645	006400608	S	1384	GTTTATTTAGTAAGCAGTGTTTTTATTCCTTAGTTAGATTTTAAGCTGCT				2qC2	Mus musculus Sjogren syndrome antigen B (Ssb), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC118101; SS-B	MGC118101; SS-B
Mus musculus	RefSeq	ILMN_193502	ILMN_241816	SSB	NM_009278.3	NM_009278.3		20823	145966775	NM_009278.3	Ssb	NP_033304.1	ILMN_2591749	002510397	S	1399	AGTGTTTTTATTCCTTAGTTAGATTTTAAGCTGCTTTTTGTCTTCAGAAG				2qC2	Mus musculus Sjogren syndrome antigen B (Ssb), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC118101; SS-B	MGC118101; SS-B
Mus musculus	RefSeq	ILMN_185534	ILMN_241816	SSB	NM_009278.3	NM_009278.3		20823	145966775	NM_009278.3	Ssb	NP_033304.1	ILMN_2427835	004150082	S	1446	TCTGAAGACAAAAAGCAGCTTAAAATCTAACTAAGGAATAAAAACACTGC				2qC2	Mus musculus Sjogren syndrome antigen B (Ssb), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC118101; SS-B	MGC118101; SS-B
Mus musculus	MEEBO	ILMN_190871	ILMN_190871	SCL0003886.1_50	scl0003886.1_50	J05277.1			193841	J05277.1	scl0003886.1_50		ILMN_1245048	002470594	S	1	CGTCAACATGATCGCCGCGCAACTACTGGCATATTACTTCACCGAGCTGA										
Mus musculus	RefSeq	ILMN_209889	ILMN_209889	PPBP	NM_023785.2	NM_023785.2		57349	141802684	NM_023785.2	Ppbp	NP_076274.1	ILMN_1228102	000110100	S	259	CTCTGGAATCCCATTCAATTCTATCTCCCTTGTGAATGTGTACAGGCCAG	5	+	91198131-91198180	5qE1	Mus musculus pro-platelet basic protein (Ppbp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AI854500; Cxcl7; b-TG1; TGB; LA-PF4; NAP-2-L1; LDGF; THBGB1; 2400003M24Rik; Scyb7; beta-TG; TGB1; NAP-2; CTAP3; MDGF; CTAPIII	AI854500; Cxcl7; b-TG1; TGB; LA-PF4; NAP-2-L1; LDGF; THBGB1; 2400003M24Rik; Scyb7; beta-TG; TGB1; NAP-2; CTAP3; MDGF; CTAPIII
Mus musculus	MEEBO	ILMN_214283	ILMN_214283	C530043K16RIK	scl26541.1.1_25	NM_177241.2			31343146	NM_177241.2	C530043K16Rik		ILMN_2646341	004610681	S	2776	CTTGGGATCAGAAGTGCTTGGGATGGGTAGGGTGTAGTGATTGACAGGAC										
Mus musculus	RefSeq	ILMN_200076	ILMN_200076	LOC385713	XM_358920.1	XM_358920.1			38080243	XM_358920.1	LOC385713		ILMN_1255133	004850392	S	891	GCCAGCCAGGGTACTATACCCAGCCAAAATCTCAATTTCCATAGATGGAG										
Mus musculus	RefSeq	ILMN_213585	ILMN_213585	PTPRG	NM_008981.1	NM_008981.1		19270	6679558	NM_008981.1	Ptprg	NP_033007.1	ILMN_3071191	005960541	I	970	CCCTGGGGAGTTATTACAGGTACACAGGCTCCTTGACTACGCCACCCTGT	14	+	12942541-12942590	14qA1	Mus musculus protein tyrosine phosphatase, receptor type, G (Ptprg), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	AW549872; AW046354	AW549872; AW046354
Mus musculus	RefSeq	ILMN_213585	ILMN_213585	PTPRG	NM_008981.1	NM_008981.1		19270	6679558	NM_008981.1	Ptprg	NP_033007.1	ILMN_3149950	002140082	A	4221	CTGATCAATGTCATCAAGGAAGAGGCCTTAACCCGGGATGGCCCCACCAT	14	+	13058907-13058956	14qA1	Mus musculus protein tyrosine phosphatase, receptor type, G (Ptprg), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	AW549872; AW046354	AW549872; AW046354
Mus musculus	RefSeq	ILMN_186476	ILMN_239715	UPF2	XM_898407.2	XM_898407.2		326622	94365984	XM_898407.2	Upf2	XP_903500.1	ILMN_2435845	003290082	S	4247	CCGCAGTGATGCTGCTCTCTTAACCACTAAACTCTCTGCACCAGCTGACC	2	+	5969245-5969294	2qA1	PREDICTED: Mus musculus UPF2 regulator of nonsense transcripts homolog (yeast), transcript variant 2 (Upf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	Riken	ILMN_202491	ILMN_202491	2310058A03RIK	ri|2310058A03|ZX00040B05|AK009971|906					AK009971	2310058A03Rik		ILMN_1246307	005340091	S	170	CAGCCTCGGGATGGGTAACTGCGGCAGAAAAGTCCTTCGGGCTCTGAGTT										
Mus musculus	RefSeq	ILMN_197941	ILMN_235037	HEG1	NM_175256.5	NM_175256.5		77446	153792724	NM_175256.5	Heg1	NP_780465.4	ILMN_2529907	005690010	S	1725	ACGGGGCCAGCCCTTCCAGCCACAAGCACCAGTTTAGCCCAGATGTCTCC				16qB3	Mus musculus HEG homolog 1 (zebrafish) (Heg1), mRNA.				BC038614; 5530401I02Rik; 4632417D23Rik; 9530025L16Rik; Gm629	BC038614; 5530401I02Rik; 4632417D23Rik; 9530025L16Rik; Gm629
Mus musculus	RefSeq	ILMN_186480	ILMN_186480	XPO6	NM_028816.2	NM_028816.2		74204	37537528	NM_028816.2	Xpo6	NP_083092.2	ILMN_2923599	007040681	S	4142	GGTACCCAGAGACCCCACAGCGTGGTTCATGCAGATCGTGTGTATCAGTC	7	-	133245493-133245542	7qF3	Mus musculus exportin 6 (Xpo6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence ISO]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	AL022631; AI854665; R75304; Ranbp20; C230091E20Rik; 2610005L19Rik; mKIAA0370	AL022631; AI854665; R75304; Ranbp20; C230091E20Rik; 2610005L19Rik; mKIAA0370
Mus musculus	Riken	ILMN_203851	ILMN_203851	A530093H06RIK	ri|A530093H06|PX00143N13|AK041234|1728					AK041234	A530093H06Rik		ILMN_1231375	007050553	S	1566	CGCCCTTCATTATGAGACCTTTTGGCTCACAACCCATCCCAGTTGATTGC										
Mus musculus	Riken	ILMN_202390	ILMN_202390	4930565G20RIK	ri|4930565G20|PX00035D09|AK016228|1122					AK016228	4930565G20Rik		ILMN_1253609	003990315	S	988	TCCAGCACTAGGGTGTCAGAGGCAGGTCGATTGCAGTGTGTTAGAGCTAC										
Mus musculus	RefSeq	ILMN_199024	ILMN_199024	LOC380637	XM_358391.1	XM_358391.1			38090503	XM_358391.1	LOC380637		ILMN_1256768	003710435	S	303	TCTCTGACTCCAGTTCCGTGGGATCCAGCGTCCTCTTCTGGCCTCTTCAG										
Mus musculus	MEEBO	ILMN_215589	ILMN_215589	IRF3	scl00024.1_6	NM_016849.2			31980862	NM_016849.2	Irf3		ILMN_1229320	003190044	S	1116	GTGGACACTCCCCACGCTACACTCTGTGGTTCTGCATGGGGGAAATGTGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IGI]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]		
Mus musculus	RefSeq	ILMN_222757	ILMN_222757	4931428L18RIK	NM_027637.2	NM_027637.2		70988	142351986	NM_027637.2	4931428L18Rik	NP_081913.1	ILMN_1251021	004390110	S	921	GGCAGCCTGATGAATGTTGAGTGTGCATTGATGTTCCTGGTAAAGGTATG	1	-	31198001-31198050	1qA5-qB	Mus musculus RIKEN cDNA 4931428L18 gene (4931428L18Rik), mRNA.				4930563O14Rik	4930563O14Rik
Mus musculus	RefSeq	ILMN_241614	ILMN_241614	ARMC9	NM_027456.1	NM_027456.1		78795	119637814	NM_027456.1	Armc9	NP_081732.1	ILMN_3099741	006040014	A	1851	TGACATCATGGAAGCTGACCTGGACAAAGATGAACTGATCCAGCCCCAGC	1	+	88141149-88141198	1qC5	Mus musculus armadillo repeat containing 9 (Armc9), transcript variant 2, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4930438O05Rik; 5730415N24Rik; 3830422A13Rik; 4831423D23Rik	4930438O05Rik; 5730415N24Rik; 3830422A13Rik; 4831423D23Rik
Mus musculus	RefSeq	ILMN_188187	ILMN_243091	TLN2	NM_001081242.1	NM_001081242.1		70549	124486956	NM_001081242.1	Tln2	NP_001074711.1	ILMN_2450506	001410494	S	8229	GGCTCACAGGAATCATCAGTATCATGGACATAGAGATTCTCTCTCTGGAG	9	-	67068770-67068819	9qC	Mus musculus talin 2 (Tln2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730421P04Rik; MGC100340; AI787438; AL118320; AI507121; mKIAA0320	5730421P04Rik; MGC100340; AI787438; AL118320; AI507121; mKIAA0320
Mus musculus	RefSeq	ILMN_195084	ILMN_243091	TLN2	NM_001081242.1	NM_001081242.1		70549	124486956	NM_001081242.1	Tln2	NP_001074711.1	ILMN_2512449	003610356	S	2602	AGGCGAGCCCATTGGCCGCTATGACCAGGCCACCGACACCATCATGTGTG	9	-	67194163-67194212	9qC	Mus musculus talin 2 (Tln2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730421P04Rik; MGC100340; AI787438; AL118320; AI507121; mKIAA0320	5730421P04Rik; MGC100340; AI787438; AL118320; AI507121; mKIAA0320
Mus musculus	RefSeq	ILMN_243091	ILMN_243091	TLN2	NM_001081242.1	NM_001081242.1		70549	124486956	NM_001081242.1	Tln2	NP_001074711.1	ILMN_3086334	006420369	A	4363	CCCGAATGAGCCTGTGAGCGACCTCTCTTATTTTGACTGCATTGAGAGTG	9	-	67156693-67156742	9qC	Mus musculus talin 2 (Tln2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730421P04Rik; MGC100340; AI787438; AL118320; AI507121; mKIAA0320	5730421P04Rik; MGC100340; AI787438; AL118320; AI507121; mKIAA0320
Mus musculus	RefSeq	ILMN_196258	ILMN_243091	TLN2	NM_001081242.1	NM_001081242.1		70549	124486956	NM_001081242.1	Tln2	NP_001074711.1	ILMN_1222194	003310064	S	7478	CATGCCAGTGAGGAAAAGCTCATCTCATCCGCCAAGCAGGTCGCAGCTTC	9	-	67074984-67075033	9qC	Mus musculus talin 2 (Tln2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730421P04Rik; MGC100340; AI787438; AL118320; AI507121; mKIAA0320	5730421P04Rik; MGC100340; AI787438; AL118320; AI507121; mKIAA0320
Mus musculus	MEEBO	ILMN_212599	ILMN_212599	COPS7B	scl026895.7_143	NM_172974.1			27764885	NM_172974.1	Cops7b		ILMN_2628283	007210730	S	1662	GTCTCTGACTGCACAGCCTTGATTTGGCATTTCGACCCAGCTACCCACTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_222513	ILMN_240869	TMEM149	NM_145580.2	NM_145580.2		101883	117414140	NM_145580.2	Tmem149	NP_663555.2	ILMN_1244377	000050360	S	742	CCCTGGAGGTATTGGAAAGTAGAAACAGAGGGAAAGCTAATCTGCTGCAG	7	+	31352457-31352506	7qB1	Mus musculus transmembrane protein 149 (Tmem149), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC30332; F630003I17Rik	MGC30332; F630003I17Rik
Mus musculus	RefSeq	ILMN_214280	ILMN_255578	ADAM28	NM_001048175.1	NM_001048175.1		13522	114326441	NM_001048175.1	Adam28	NP_001041640.1	ILMN_1240484	000580132	S	407	CTCGGAAACATACTATAATTCCAGTGGAAACAAGGTCACCACAAGCCCGC	14	-	69264900-69264949	14qD2	Mus musculus a disintegrin and metallopeptidase domain 28 (Adam28), transcript variant 4, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Dtgn1; C130072N01Rik; MDC-Ls; MDC-Lm; MDCL; D430033C21Rik; eMDCII; MDC-L	Dtgn1; C130072N01Rik; MDC-Ls; MDC-Lm; MDCL; D430033C21Rik; eMDCII; MDC-L
Mus musculus	RefSeq	ILMN_222561	ILMN_222561	STK39	NM_016866.2	NM_016866.2		53416	40538821	NM_016866.2	Stk39	NP_058562.1	ILMN_2751494	004040192	S	2983	GACCTTCAAGAAGGTGGGCTCCGGGGATGGTACCATTGCTCTTTCCTAGC	2	-	68048718-68048767	2qC1.3	Mus musculus serine/threonine kinase 39, STE20/SPS1 homolog (yeast) (Stk39), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DCHT; AW556857; SPAK; AW227544	DCHT; AW556857; SPAK; AW227544
Mus musculus	MEEBO	ILMN_223978	ILMN_223978	TLK2	scl40824.25_304				6755804	NM_011903	Tlk2		ILMN_2772538	005420075	S	3439	AGTGAAACCCGTATTAGCGAGTACGTGGCAATGTTCATTCCGGTCAGATG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201209	ILMN_201209	LOC382076	XM_358701.1	XM_358701.1			38089847	XM_358701.1	LOC382076		ILMN_1231261	000510685	S	435	GTGTGGGCATCAGGAAAGCAAACAGGCAAGCAGGCAAGGAGGCCAAGAGC										
Mus musculus	RefSeq	ILMN_220534	ILMN_241507	1700029J07RIK	NM_001033148.2	NM_001033148.2		69479	142388130	NM_001033148.2	1700029J07Rik	NP_001028320.1	ILMN_2723346	003800050	S	2616	TCAGAGAGTACACAACGTTCTGGAACAAATGGCTCCATGGCGGGTAAAGG	8	-	47039034-47039083	8qB1.1	Mus musculus RIKEN cDNA 1700029J07 gene (1700029J07Rik), mRNA.				MGC130198	MGC130198
Mus musculus	RefSeq	ILMN_231818	ILMN_231818	6430411K18RIK	NR_002848.1	NR_002848.1		76880	84872140	NR_002848.1	6430411K18Rik		ILMN_2966602	000620438	S	1281	TCGGGCCCCAGACTCGTAAAAGACGCCGCTTTGATCACTGTCTCCAGCCC	12	+	110831027-110831063	12qF1	Mus musculus RIKEN cDNA 6430411K18 gene (6430411K18Rik), non-coding RNA.				mir-127; mir-136	mir-127; mir-136
Mus musculus	RefSeq	ILMN_216349	ILMN_216349	EVA1	NM_007962.2	NM_007962.2		14012	31542622	NM_007962.2	Eva1	NP_031988.2	ILMN_2906165	006480053	S	2660	GATCCTACTGCCTCTGCCTCCCTAGTGCTAGGAATAAGGGCATGTTCCAC	9	+	44804695-44804744	9qA5.2	Mus musculus epithelial V-like antigen 1 (Eva1), mRNA.				Mpzl2; Eva	Mpzl2; Eva
Mus musculus	RefSeq	ILMN_223443	ILMN_229190	IGSF3	NM_207205.1	NM_207205.1		78908	46402170	NM_207205.1	Igsf3	NP_997088.1	ILMN_1229553	002100201	S	4349	GGCCCAATTTGTATCTTATCTCTTCCTTCAGCCGGAGTTGTTGGAACCAC	3	+	101264587-101264636	3qF2.2	Mus musculus immunoglobulin superfamily, member 3 (Igsf3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700016K10Rik; 4833439O17Rik; V7; Igsf2; mKIAA0466; Cd101; 2810035F16Rik	1700016K10Rik; 4833439O17Rik; V7; Igsf2; mKIAA0466; Cd101; 2810035F16Rik
Mus musculus	MEEBO	ILMN_184991	ILMN_184991	DLEU2	scl0328425.1_11						Dleu2		ILMN_2423282	000020196	S	7	GGGCAGAAACCTACGTGTTCCTCTTCCAGAGAGCTGGTGAAGCCAAAGGC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_211754	ILMN_211754	SRM	NM_009272.4	NM_009272.4		20810	145966698	NM_009272.4	Srm	NP_033298.1	ILMN_1225880	005080204	S	932	GCTGAAATACTATAACTCGGACATGCACCGTGCCGCCTTCGTACTGCCCG				4qE2	Mus musculus spermidine synthase (Srm), mRNA.		The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane [goid 8295] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosylmethioninamine + putrescine = 5'-methylthioadenosine + spermidine [goid 4766] [evidence IEA]	SpdSy; AA407669	SpdSy; AA407669
Mus musculus	RefSeq	ILMN_211754	ILMN_211754	SRM	NM_009272.4	NM_009272.4		20810	145966698	NM_009272.4	Srm	NP_033298.1	ILMN_2630641	003310347	S	286	GCAACGTGCTGGTTCTGGATGGCGTCATCCAGTGTACTGAGAGGGATGAG				4qE2	Mus musculus spermidine synthase (Srm), mRNA.		The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane [goid 8295] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosylmethioninamine + putrescine = 5'-methylthioadenosine + spermidine [goid 4766] [evidence IEA]	SpdSy; AA407669	SpdSy; AA407669
Mus musculus	Riken	ILMN_207100	ILMN_207100	B230209J16RIK	ri|B230209J16|PX00316L10|AK080803|1196					AK080803	B230209J16Rik		ILMN_1249139	003830722	S	775	GCATGTGGAGCTTGAGCTGGGCGTTCTTAGGTTGCTGTTCCGTGACACAG										
Mus musculus	MEEBO	ILMN_191668	ILMN_191668	1700052O22RIK	scl073354.1_302						1700052O22Rik		ILMN_2481117	002360592	S	5	GAGCAGGGGTTGCGCCTACAGCAAGACTTATTTGCTACCATATGGTTTGT										
Mus musculus	RefSeq	ILMN_215396	ILMN_215396	DAB1	NM_010014.2	NM_010014.2		13131	70909365	NM_010014.2	Dab1	NP_034144.1	ILMN_2658980	003140128	S	423	GCCAAGCTGATTGGGATTGATGAAGTGTCCGCAGCTCGGGGAGACAAGTT	4	+	104277965-104278014	4qC6	Mus musculus disabled homolog 1 (Drosophila) (Dab1), transcript variant 1, mRNA.	Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IGI]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IMP]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence TAS]; The interaction between two cells that modulates the association of a neuronal cell and a glial cell involved in glial-mediated radial cell migration in the cerebral cortex [goid 21813] [evidence IMP]; The process that contributes to the act of creating the structural organization of the cerebellum. This process pertains to the physical shaping of a rudimentary structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21589] [evidence IMP]; The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain [goid 21799] [evidence IMP]; The migration of postmitotic Purkinje cells along radial glial cells from the ventricular zone to the Purkinje cell layer [goid 21942] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence TAS]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	scm; scr; yot; scrambler; C630028C02Rik; AI956902	scm; scr; yot; scrambler; C630028C02Rik; AI956902
Mus musculus	RefSeq	ILMN_215396	ILMN_215396	DAB1	NM_010014.2	NM_010014.2		13131	70909365	NM_010014.2	Dab1	NP_034144.1	ILMN_1248822	007510687	S	879	CCCGTGTACCAGGTAATTTCTGAACCACGTCAGGGTTTTGCATGCAGCTG	4	+	104352702-104352751	4qC6	Mus musculus disabled homolog 1 (Drosophila) (Dab1), transcript variant 1, mRNA.	Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IGI]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence TAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IMP]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence TAS]; The interaction between two cells that modulates the association of a neuronal cell and a glial cell involved in glial-mediated radial cell migration in the cerebral cortex [goid 21813] [evidence IMP]; The process that contributes to the act of creating the structural organization of the cerebellum. This process pertains to the physical shaping of a rudimentary structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21589] [evidence IMP]; The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain [goid 21799] [evidence IMP]; The migration of postmitotic Purkinje cells along radial glial cells from the ventricular zone to the Purkinje cell layer [goid 21942] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence TAS]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	scm; scr; yot; scrambler; C630028C02Rik; AI956902	scm; scr; yot; scrambler; C630028C02Rik; AI956902
Mus musculus	RefSeq	ILMN_193367	ILMN_214398	SAMD8	NM_026283.2	NM_026283.2		67630	85662411	NM_026283.2	Samd8	NP_080559.1	ILMN_1219877	003310121	S	6572	CATCTCTTTTAATCTGAACTAGTGGATTGTCTGAAGAACCAAACCGAGCC	14	+	22617522-22617571	14qA3	Mus musculus sterile alpha motif domain containing 8 (Samd8), mRNA. XM_979722	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6686] [evidence NAS]		1700010P07Rik; MGC118303; 1110053F04Rik	1700010P07Rik; MGC118303; 1110053F04Rik
Mus musculus	RefSeq	ILMN_214398	ILMN_214398	SAMD8	NM_026283.2	NM_026283.2		67630	85662411	NM_026283.2	Samd8	NP_080559.1	ILMN_2647590	000060521	S	972	TGGGCACTGTATTCTTGCTTCGCTGCTTTACCATGTTTGTGACCTCCCTC	14	+	22602933-22602982	14qA3	Mus musculus sterile alpha motif domain containing 8 (Samd8), mRNA. XM_979722	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6686] [evidence NAS]		1700010P07Rik; MGC118303; 1110053F04Rik	1700010P07Rik; MGC118303; 1110053F04Rik
Mus musculus	MEEBO	ILMN_193669	ILMN_193669	TRDV5_M23382_T_CELL_RECEPTOR_DELTA_VARIABLE_3_275	TRDV5_M23382_T_cell_receptor_delta_variable_3_275						TRDV5_M23382_T_cell_receptor_delta_variable_3_275		ILMN_1249067	000020270	S	18	TCTCTCCAGTGAGCCTTGAAGACAGCGCTACTTATTACTGTGCCTCCGGG										
Mus musculus	RefSeq	ILMN_242049	ILMN_242049	USP19	NM_027804.2	NM_027804.2		71472	47825365	NM_027804.2	Usp19	NP_082080.2	ILMN_2874414	006290626	S	4297	CCGTGGCGGCTTTGGTGGCCCTTGTGCTCAACGTATTCTATCCTCTGGTA	9	+	108403682-108403731	9qF2	Mus musculus ubiquitin specific peptidase 19 (Usp19), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI047774; 8430421I07Rik; Zmynd9	AI047774; 8430421I07Rik; Zmynd9
Mus musculus	RefSeq	ILMN_191732	ILMN_242049	USP19	NM_027804.2	NM_027804.2		71472	47825365	NM_027804.2	Usp19	NP_082080.2	ILMN_1213862	000770100	S	4556	CCTGTTTCTCTGACCCTTGTCCTAGGGCTTGGCCCTGCTGGAACTATTTC	9	+	108403941-108403990	9qF2	Mus musculus ubiquitin specific peptidase 19 (Usp19), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI047774; 8430421I07Rik; Zmynd9	AI047774; 8430421I07Rik; Zmynd9
Mus musculus	Riken	ILMN_204590	ILMN_204590	C130044B04RIK	ri|C130044B04|PX00169F03|AK048262|1846					AK048262	C130044B04Rik		ILMN_2566148	003060603	S	1440	CCAGGTGACCACTGCTATTATTGAATACTCGGAACGCTGGCAGGCCCTCC										
Mus musculus	RefSeq	ILMN_201305	ILMN_201305	LOC382405	XM_356487.1	XM_356487.1			38090736	XM_356487.1	LOC382405		ILMN_1257887	002340037	S	1	ATGAAGAACCACACAGTGCTGATCCTCCTCATTGTCACTATGAGAAGACG										
Mus musculus	RefSeq	ILMN_256430	ILMN_256430	RHOX4G	NM_001039698.1	NM_001039698.1		664608	89242157	NM_001039698.1	Rhox4g	NP_001034787.1	ILMN_2865999	003450128	S	302	CAGGCAGTCTTACCACTGGATGGAGAGGGAAGAAATGAGGGAGAGAGTGG	X	-	35065289-35065338	XqA3.3	Mus musculus reproductive homeobox 4G (Rhox4g), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Rhox4.7	Rhox4.7
Mus musculus	RefSeq	ILMN_185145	ILMN_185145	TSPAN7	NM_019634.2	NM_019634.2		21912	84662760	NM_019634.2	Tspan7	NP_062608.2	ILMN_2807016	006130431	S	1193	GCCCCTCACTGTGGTCCAAGAATGCCACACACCTTTCCGTAGATATGCCG	X	+	10173149-10173198	XqA1.1	Mus musculus tetraspanin 7 (Tspan7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			TALLA; Mxs1; R74651; PE31; Tm4sf2; AI323365; A15; Cd231; 1200014P11Rik	TALLA; Mxs1; R74651; PE31; Tm4sf2; AI323365; A15; Cd231; 1200014P11Rik
Mus musculus	RefSeq	ILMN_211930	ILMN_211930	HRH1	NM_008285.3	NM_008285.3		15465	142345432	NM_008285.3	Hrh1	NP_032311.2	ILMN_2620871	001260487	S	3235	GGGTCTGACAAGGACAAAGAGGGATCAGTGAATACAAGTCTTCCGCTAAG	6	+	114432743-114432792	6qE3	Mus musculus histamine receptor H1 (Hrh1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with histamine to initiate a change in cell activity. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans [goid 4969] [evidence IEA]	Bphs	Bphs
Mus musculus	RefSeq	ILMN_229870	ILMN_229870	COLQ	NM_009937.1	NM_009937.1		382864	114703722	NM_009937.1	Colq	NP_034067.1	ILMN_2863385	004880181	S	798	CTCCAGGAAGATGCCTTTGCGGACCCCCTGTGAATGTGAATAACCCCTCC	14	-	32342723-32342772	14qB	Mus musculus collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase (Colq), mRNA. XM_982303 XM_985387 XM_985419 XM_985465	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]		MGC130387	MGC130387
Mus musculus	RefSeq	ILMN_207449	ILMN_207449	MIF	NM_010798.1	NM_010798.1			6754695	NM_010798.1	Mif		ILMN_1260512	000670427	I	2	GCACGACGTCAGGTCCCTGGCTTGGGTCACACCGCGCTTTGTACCGTCCT						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 30330] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: keto-phenylpyruvate = enol-phenylpyruvate [goid 50178] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212951	ILMN_212951	ETV1	NM_007960.3	NM_007960.3		14009	112293267	NM_007960.3	Etv1	NP_031986.1	ILMN_2643915	001450156	S	62	ATTAAATTTGGAGGGAATTTTTTGCAGCCGTTCGCCTAGCGTGGCCTTCA	12	+	39506958-39507007	12qA3-qB1	Mus musculus ets variant gene 1 (Etv1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Behavior that is dependent upon the sensation of a mechanical stimulus [goid 7638] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Etsrp81; ER81	Etsrp81; ER81
Mus musculus	RefSeq	ILMN_212951	ILMN_212951	ETV1	NM_007960.3	NM_007960.3		14009	112293267	NM_007960.3	Etv1	NP_031986.1	ILMN_2631953	004760603	S	2409	GATGCCCATCTCACTTAAATAATGACATGTCATGATCCTTCGGAATCTTC	12	+	39593133-39593182	12qA3-qB1	Mus musculus ets variant gene 1 (Etv1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Behavior that is dependent upon the sensation of a mechanical stimulus [goid 7638] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Etsrp81; ER81	Etsrp81; ER81
Mus musculus	RefSeq	ILMN_220344	ILMN_316008	LOC100045460	XR_031715.1	XR_031715.1		100045460	149270935	XR_031715.1	LOC100045460		ILMN_1216433	002480270	S	615	GAGGAAGTATCGAGTGATATATTCAGAGATTAGTGATCCTGAAGAGGAAG					PREDICTED: Mus musculus similar to Ssxb3 protein (LOC100045460), misc RNA.					
Mus musculus	RefSeq	ILMN_214487	ILMN_214487	DUSP15	NM_145744.2	NM_145744.2		252864	118130203	NM_145744.2	Dusp15	NP_665687.1	ILMN_2648508	000540403	S	10	CGCTAAGATAGGGGTGCGCCCCGCCACCCTGCCTCAGGATCATGGGGAAT	2	-	152777082-152777091:152777092-152777131	2qH1	Mus musculus dual specificity phosphatase-like 15 (Dusp15), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	T-DSP10; LMW-DSP10	T-DSP10; LMW-DSP10
Mus musculus	RefSeq	ILMN_214487	ILMN_214487	DUSP15	NM_145744.2	NM_145744.2		252864	118130203	NM_145744.2	Dusp15	NP_665687.1	ILMN_2675090	003180553	S	261	GTCCACTTTATCCACTCCTGCCGCCTCAACGGGGGTAACTGCCTTGTGCA	2	-	152771165-152771214	2qH1	Mus musculus dual specificity phosphatase-like 15 (Dusp15), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	T-DSP10; LMW-DSP10	T-DSP10; LMW-DSP10
Mus musculus	Riken	ILMN_204404	ILMN_204404	A130076G11RIK	ri|A130076G11|PX00125I09|AK038076|1418					AK038076	A130076G11Rik		ILMN_1220533	003290609	S	1317	CACCTAGAGGTAGAGGCAGGTGGATCTCTGTGTGTTGGAGACCATCTTGG										
Mus musculus	RefSeq	ILMN_207463	ILMN_207463	D230019K20RIK	NM_177124.2	NM_177124.2			31342855	NM_177124.2	D230019K20Rik		ILMN_2587737	007050358	I	3073	CCAGCTTTCTTGCTCTGAGAACCTTTCTGTGGTGCACTGGAGATGGCACC										
Mus musculus	MEEBO	ILMN_211601	ILMN_211601	A930033C23RIK	scl26696.5.9_215	XM_149603.1			20826019	XM_149603.1	A930033C23Rik		ILMN_2617544	001450187	S	1038	CGGAAAGCGGCGTGGGGAGAAAAGGGGGTTGTTTGAGACCAAAATAGTTG										
Mus musculus	RefSeq	ILMN_237312	ILMN_237312	FBXW12	NM_001008428.1	NM_001008428.1		434440	56605675	NM_001008428.1	Fbxw12	NP_001008428.1	ILMN_2895130	003890463	S	1035	CGCAAGCTTCTCTTTGCAAGATTATGAGGCGAGTCCAGAATGGATGGGAG	9	-	109079187-109079236	9qF2	Mus musculus F-box and WD-40 domain protein 12 (Fbxw12), mRNA.				MGC103250; BC085247	MGC103250; BC085247
Mus musculus	MEEBO	ILMN_222535	ILMN_222535	SPATA13	scl0219140.10_154	XM_147847.4			38076335	XM_147847.4	Spata13		ILMN_2751037	004220673	S	7297	ACAAATCCAGGCTGCGGTGCTGTGGTCTGTAAGAGTCAAGCTGCTGAGCT						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200571	ILMN_200571	LOC383364	XM_357009.1	XM_357009.1			38083834	XM_357009.1	LOC383364		ILMN_1224508	002850315	S	153	CTGGGGAAATAAGATTGGCAAGCCTCACACAGCTCCACACAAGGTGCCAG										
Mus musculus	RefSeq	ILMN_196719	ILMN_224665	KLRA33	NM_001039118.1	NM_001039118.1		654450	84993760	NM_001039118.1	Klra33	NP_001034207.1	ILMN_1242590	001690594	S	189	GCTTATGACAAACATTTTTCAGTATGGTCAACAAAAACATGAACTGCAGG	6	-	130027882-130027918:130028799-130028811		Mus musculus killer cell lectin-like receptor subfamily A member 33 (Klra33), mRNA.					
Mus musculus	RefSeq	ILMN_224665	ILMN_224665	KLRA33	NM_001039118.1	NM_001039118.1		654450	84993760	NM_001039118.1	Klra33	NP_001034207.1	ILMN_2982019	006660279	S	84	ACGGAAGCCTCAAAAAGCTGGCCTCAGAGTGTGTTCAGTTCCCTGGCAGT	6	-	130028867-130028888:130030884-130030911		Mus musculus killer cell lectin-like receptor subfamily A member 33 (Klra33), mRNA.					
Mus musculus	RefSeq	ILMN_197575	ILMN_197575	LOC229550	XM_130997.2	XM_130997.2			28492071	XM_130997.2	LOC229550		ILMN_2528610	003420674	S	427	GTCATAGGCACTGAAATTGTGGATGTGTGTGGAAGCTGCAGTGAAATAAA										
Mus musculus	RefSeq	ILMN_208646	ILMN_245480	TDRD1	NM_001002241.1	NM_001002241.1		83561	50355697	NM_001002241.1	Tdrd1	NP_001002241.1	ILMN_2763563	001090048	S	3825	ATCCAACCAACCAAAGTAAATTCACAGAGATGAAAAAGCTGCTGAGAAGC	19	+	56941080-56941129	19qD2	Mus musculus tudor domain containing 1 (Tdrd1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes [goid 43186] [evidence IDA]; A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182) [goid 33391] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MTR-1	MTR-1
Mus musculus	RefSeq	ILMN_208646	ILMN_245480	TDRD1	NM_001002241.1	NM_001002241.1		83561	50355697	NM_001002241.1	Tdrd1	NP_001002241.1	ILMN_2718442	003060100	S	3640	ATGTTCTGAGAACGGAATGATCAATATAGCTGAGAATCTGGTGATGTGTG	19	+	56940395-56940444	19qD2	Mus musculus tudor domain containing 1 (Tdrd1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes [goid 43186] [evidence IDA]; A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182) [goid 33391] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MTR-1	MTR-1
Mus musculus	RefSeq	ILMN_202409	ILMN_317141	LOC432730	XR_032194.1	XR_032194.1		432730	149263917	XR_032194.1	LOC432730		ILMN_1224653	004830201	S	545	TCACGGTCCAAGTCCCAGCCCAAGAAAGAAATGAAGGCTAAATCACGTTC	13	-	20087088-20087137	13qA2	PREDICTED: Mus musculus similar to FUS interacting protein (serine-arginine rich) 1 (LOC432730), misc RNA.					
Mus musculus	MEEBO	ILMN_220061	ILMN_220061	IRX2	scl44638.6.1_24				47059033	NM_010574	Irx2		ILMN_2717099	003290494	S	1768	GAAACAATCTGTTTTTTCTCAGGATATCCTCATCACTTCATTGCCACGGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_186625	ILMN_244762	1110059E24RIK	NM_025423.2	NM_025423.2		66206	141802670	NM_025423.2	1110059E24Rik	NP_079699.1	ILMN_2661628	000520551	S	858	CCCCCTTACATCGCACAAAGCAAAACAGCTTATTTTTATACACACTACAC	19	-	21672323-21672372	19qB	Mus musculus RIKEN cDNA 1110059E24 gene (1110059E24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220289	ILMN_220289	CYB5B	NM_025558.4	NM_025558.4		66427	146134969	NM_025558.4	Cyb5b	NP_079834.2	ILMN_2720180	006270082	S	4081	CTCCTTTCGGTTATTTGGCTTGTCTTTTCCTGCACCCTCAACTGAGTGGC				8qD3	Mus musculus cytochrome b5 type B (Cyb5b), mRNA.	The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	Cyb5m; AU015618; 1810044O22Rik	Cyb5m; AU015618; 1810044O22Rik
Mus musculus	Riken	ILMN_203948	ILMN_203948	A430083A02RIK	ri|A430083A02|PX00138E10|AK040277|1142					AK040277	A430083A02Rik		ILMN_1260407	003170079	S	966	GATCTACCTGTCTCTGCATCTGAGGGATTAAAGGCATGTGCCATCACTGC										
Mus musculus	MEEBO	ILMN_195759	ILMN_195759	2810047C21RIK	scl072716.1_99				51742877	XM_487980	2810047C21Rik		ILMN_1228173	005390445	S	14	CTCATCAAAGAAGAACATGGATCAAGATGAGGATTAGTGCCATCTTATTC										
Mus musculus	RefSeq	ILMN_186857	ILMN_186857	USP11	NM_145628.2	NM_145628.2		236733	31981833	NM_145628.2	Usp11	NP_663603.2	ILMN_2802244	003140288	S	2947	CTGTATTACTCTCTCAGAAAGAAGAGGCCCTATGCCCCTGGCAGTGTGCC	X	+	19877004-19877053	XqA1.3	Mus musculus ubiquitin specific peptidase 11 (Usp11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	6230415D12Rik; MGC6649; mKIAA4085; KIAA4085	6230415D12Rik; MGC6649; mKIAA4085; KIAA4085
Mus musculus	RefSeq	ILMN_184575	ILMN_242032	PPM1L	NM_178726.3	NM_178726.3		242083	118130622	NM_178726.3	Ppm1l	NP_848841.2	ILMN_2662456	005050066	S	3299	CAAACTGTCTGGATTCCTCTGGGAACTTGCTTTCCTTTGGCTGCATCAAG	3	+	69358663-69358712	3qE1	Mus musculus protein phosphatase 1 (formerly 2C)-like (Ppm1l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IPI]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PP2C; AI481720; Ppp2ce; 3222401G13; PP2Cepsilon; 5930404J21Rik; KIAA4175; AW045850; Pp2ce; mKIAA4175	PP2C; AI481720; Ppp2ce; 3222401G13; PP2Cepsilon; 5930404J21Rik; KIAA4175; AW045850; Pp2ce; mKIAA4175
Mus musculus	RefSeq	ILMN_184575	ILMN_242032	PPM1L	NM_178726.3	NM_178726.3		242083	118130622	NM_178726.3	Ppm1l	NP_848841.2	ILMN_2698757	005570132	S	3563	GTGATGGGATGAGCTTGTTGGCTTAGGATGCTCTTACCAGAGAGTACCCA	3	+	69358927-69358976	3qE1	Mus musculus protein phosphatase 1 (formerly 2C)-like (Ppm1l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IPI]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PP2C; AI481720; Ppp2ce; 3222401G13; PP2Cepsilon; 5930404J21Rik; KIAA4175; AW045850; Pp2ce; mKIAA4175	PP2C; AI481720; Ppp2ce; 3222401G13; PP2Cepsilon; 5930404J21Rik; KIAA4175; AW045850; Pp2ce; mKIAA4175
Mus musculus	RefSeq	ILMN_198532	ILMN_198532	LOC331379	XM_285429.2	XM_285429.2			38086060	XM_285429.2	LOC331379		ILMN_1226362	001780468	S	382	GGCACTCTCCAGAGACAAGAGGACGGCCAGCTGAAGAAGCATGAGAAGCC										
Mus musculus	Riken	ILMN_204423	ILMN_204423	A330060E23RIK	ri|A330060E23|PX00132M10|AK039553|1558					AK039553	A330060E23Rik		ILMN_1250092	005570433	S	1221	CCAGCTTCCCAAGCCTGAATGAAGCCTGCCTGGATATGGACCCCAAAGCC										
Mus musculus	RefSeq	ILMN_199375	ILMN_315488	EG277333	NR_003623.1	NR_003623.1		277333	153791508	NR_003623.1	EG277333		ILMN_2591127	000650347	S	3478	CATCTCCCTCACAATTTCCACCCCAGACCCTCATAGTAACAGGATGAGCC				1qH4	Mus musculus predicted gene, EG277333 (EG277333), non-coding RNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: D-glyceraldehyde 3-phosphate + phosphate + NAD+ = 3-phospho-D-glyceroyl phosphate + NADH + H+ [goid 4365] [evidence IEA]	MGC68323	MGC68323
Mus musculus	MEEBO	ILMN_196172	ILMN_196172	2010313D22RIK	scl067021.1_328						2010313D22Rik		ILMN_1237803	000450270	S	8	TCCGGAGACACACCACACTTCCCATCCCCCTCACATCCTTTTTGTTAAAA										
Mus musculus	RefSeq	ILMN_249685	ILMN_249685	GM166	NM_001033040.1	NM_001033040.1		233899	85986578	NM_001033040.1	Gm166	NP_001028212.1	ILMN_2953542	002000672	S	1554	CCCCCACCTTCACGAGCACCTTCTGGGTTTCCCTGTGAAACTAGACAGCA	7	-	127374463-127374512	7qF3	Mus musculus gene model 166, (NCBI) (Gm166), mRNA.					
Mus musculus	RefSeq	ILMN_190926	ILMN_229521	TIAL1	NM_009383.2	NM_009383.2		21843	114687767	NM_009383.2	Tial1	NP_033409.1	ILMN_2590837	003520619	S	1184	CTGTGAACGGCACTACAATCGAAGGACATGTGGTGAAATGCTATTGGGGT	7	-	135587830-135587879	7qF3	Mus musculus Tia1 cytotoxic granule-associated RNA binding protein-like 1 (Tial1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types [goid 17145] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IDA]	mTIAR; AL033329; 5330433G13Rik	mTIAR; AL033329; 5330433G13Rik
Mus musculus	RefSeq	ILMN_190926	ILMN_229521	TIAL1	NM_009383.2	NM_009383.2		21843	114687767	NM_009383.2	Tial1	NP_033409.1	ILMN_1247931	006650148	S	322	TCCCCCTTGTCCCGGGATCACTCCGTCGCACCCACCATGATGGAAGACGA	7	-	135604656-135604670:135604671-135604705	7qF3	Mus musculus Tia1 cytotoxic granule-associated RNA binding protein-like 1 (Tial1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types [goid 17145] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IDA]	mTIAR; AL033329; 5330433G13Rik	mTIAR; AL033329; 5330433G13Rik
Mus musculus	RefSeq	ILMN_190926	ILMN_229521	TIAL1	NM_009383.2	NM_009383.2		21843	114687767	NM_009383.2	Tial1	NP_033409.1	ILMN_1212920	002650068	S	3932	GCACCATTTTAGGAAATGAGATGATCAAGCTAACACAGGTCCAGACTGTC	7	-	135583601-135583650	7qF3	Mus musculus Tia1 cytotoxic granule-associated RNA binding protein-like 1 (Tial1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types [goid 17145] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IDA]	mTIAR; AL033329; 5330433G13Rik	mTIAR; AL033329; 5330433G13Rik
Mus musculus	RefSeq	ILMN_199739	ILMN_199739	LOC382953	XM_356766.1	XM_356766.1			38076696	XM_356766.1	LOC382953		ILMN_1217983	005390377	S	332	TTCTAGGAGACTTGAGTGCAGCCGCCCTGGCTGATGGCTCTGCTCAGTGT										
Mus musculus	Riken	ILMN_207099	ILMN_207099	9230103K20RIK	ri|9230103K20|PX00316E01|AK078992|990					AK078992	9230103K20Rik		ILMN_1251207	003420356	S	639	CAACTGAGCCATCTGCCCAGGCCCAAGAGCAGACCTTTAGAGAAGTTGTT										
Mus musculus	RefSeq	ILMN_217921	ILMN_217921	OSGIN2	NM_145950.3	NM_145950.3		209212	142382931	NM_145950.3	Osgin2	NP_666062.2	ILMN_1255408	005420053	S	2530	GGATGGAACTACTTACCCTTGTGTGAACACTGAGTTAATTTCTATTAATG	4	-	15924335-15924384	4qA2	Mus musculus oxidative stress induced growth inhibitor family member 2 (Osgin2), mRNA.				C230027H09Rik; MGC11786; BC010311	C230027H09Rik; MGC11786; BC010311
Mus musculus	RefSeq	ILMN_218418	ILMN_218418	IL1RN	NM_031167.3	NM_031167.3		16181	31560856	NM_031167.3	Il1rn	NP_112444.1	ILMN_3151270	007650747	A	2167	CAATGCCACACAATGACAAAGATAGCAAATGAGCCACAGACGGCTCCACC	2	+	24206714-24206763	2qA3	Mus musculus interleukin 1 receptor antagonist (Il1rn), transcript variant 1, mRNA.	Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Blocks the binding of interleukin-1 to the interleukin-1 receptor complex [goid 5152] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]	F630041P17Rik; IL-1ra	F630041P17Rik; IL-1ra
Mus musculus	RefSeq	ILMN_218418	ILMN_218418	IL1RN	NM_031167.3	NM_031167.3		16181	31560856	NM_031167.3	Il1rn	NP_112444.1	ILMN_3072427	003390131	I	2371	TGCCATGTGTGCTCAGGATGAGCTGATTAAAGCTCTTCTCAGGGGTTCAG	2	+	24206918-24206967	2qA3	Mus musculus interleukin 1 receptor antagonist (Il1rn), transcript variant 1, mRNA.	Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Blocks the binding of interleukin-1 to the interleukin-1 receptor complex [goid 5152] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]	F630041P17Rik; IL-1ra	F630041P17Rik; IL-1ra
Mus musculus	MEEBO	ILMN_193808	ILMN_193808	D230040N21RIK	scl44407.1.1_301						D230040N21Rik		ILMN_2500627	004230349	S	16	TTCCTACCCCGGCACACGTTATTTCAGGGACACAAACCTCCCTGGACTCA										
Mus musculus	Riken	ILMN_205881	ILMN_205881	RFX1	ri|A330078I10|PX00133C24|AK039651|2077					AK039651	Rfx1		ILMN_1213541	006620091	S	1661	CACGCCAGTGATTGGGGGTGGGCCAGGGATTGTGCTCAGTGGATTCACAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	Riken	ILMN_205624	ILMN_205624	D230007L07RIK	ri|D230007L07|PX00187P08|AK051835|1789					AK051835	D230007L07Rik		ILMN_2573998	007160196	S	1536	GGGCAAAGGGTGTAGGACAACTTTCCTGAGGTTTCTTTTCCACTCAGGGC										
Mus musculus	RefSeq	ILMN_204560	ILMN_313447	LOC100044037	XM_001480511.1	XM_001480511.1		100044037	149249331	XM_001480511.1	LOC100044037	XP_001480561.1	ILMN_1236266	003370066	S	1933	CAGGAAGTCCCTGAAACTAACCAGATTCACTAAGACCCTCCCTGCCAGAG	2	+	29976274-29976323		PREDICTED: Mus musculus hypothetical protein LOC100044037 (LOC100044037), mRNA.					
Mus musculus	MEEBO	ILMN_192520	ILMN_192520	EPB4.1L2	scl39074.27_306				29789051	NM_013511	Epb4.1l2		ILMN_2488835	001770424	S	17	CCCACTGTCTGAACACTTGCTTTGTATGAAACTTGTCTGTCTCCATGTAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISS]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISS]; Interacting selectively with spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers [goid 30507] [evidence ISS]		
Mus musculus	MEEBO	ILMN_192520	ILMN_192520	EPB4.1L2	scl39074.27_306				29789051	NM_013511	Epb4.1l2		ILMN_2589219	001770593	S	2907	TCGGTCACAAGGGTGGTAGTGCACAAAGAAACAGAGTTGGCGGAGGAAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISS]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISS]; Interacting selectively with spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers [goid 30507] [evidence ISS]		
Mus musculus	RefSeq	ILMN_200386	ILMN_200386	LOC386389	XM_359198.1	XM_359198.1			38081493	XM_359198.1	LOC386389		ILMN_2538574	004920253	S	133	CGTCAAGGTGGTGTTTGCTCTAGTCGGATCCTCAAGGGTGTGTTTGCCTC										
Mus musculus	MEEBO	ILMN_195851	ILMN_195851	5730405I09RIK	scl51666.10_396				31542002	NM_026484	5730405I09Rik		ILMN_1245446	005890403	S	1	GCTGCAGGGTTAGCAATGCCCAAGCCAGGACTTGTTCCAAAAAAACATGT										
Mus musculus	RefSeq	ILMN_214507	ILMN_214507	CRYZL1	NM_133679.1	NM_133679.1		66609	21617846	NM_133679.1	Cryzl1	NP_598440.1	ILMN_2648695	003390068	S	655	GTCCATGTTGCTGAAAGCTGTTTGGAGGAAACAGGTGGCCTGGGAGTAGA	16	-	91695525-91695574	16qC3.3	Mus musculus crystallin, zeta (quinone reductase)-like 1 (Cryzl1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2410006O11Rik; 2210407J23Rik	2410006O11Rik; 2210407J23Rik
Mus musculus	RefSeq	ILMN_214507	ILMN_214507	CRYZL1	NM_133679.1	NM_133679.1		66609	21617846	NM_133679.1	Cryzl1	NP_598440.1	ILMN_1246295	000780243	S	1312	GGGACATTCCAAAAGCTTCTTTTAGTTATTGTATCTGTACACTTTGCCTC	16	-	91689794-91689843	16qC3.3	Mus musculus crystallin, zeta (quinone reductase)-like 1 (Cryzl1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2410006O11Rik; 2210407J23Rik	2410006O11Rik; 2210407J23Rik
Mus musculus	RefSeq	ILMN_215247	ILMN_215247	FBXO42	NM_172518.2	NM_172518.2		213499	40254216	NM_172518.2	Fbxo42	NP_766106.2	ILMN_2781835	004200037	S	5508	AAAAATGACAGCGGGGAGGATCTGAAGGAGTCCAGGGTAAGGAAGCCTGG	4	+	140759569-140759618	4qD3	Mus musculus F-box protein 42 (Fbxo42), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		6720460I06Rik; mKIAA1332	6720460I06Rik; mKIAA1332
Mus musculus	RefSeq	ILMN_215247	ILMN_215247	FBXO42	NM_172518.2	NM_172518.2		213499	40254216	NM_172518.2	Fbxo42	NP_766106.2	ILMN_2746597	003990739	S	2342	GGCTCATGGACAAGAAGCAGAATGTGAAGTACTACCCAAAGACAAACGCC	4	+	140756403-140756452	4qD3	Mus musculus F-box protein 42 (Fbxo42), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		6720460I06Rik; mKIAA1332	6720460I06Rik; mKIAA1332
Mus musculus	RefSeq	ILMN_215247	ILMN_215247	FBXO42	NM_172518.2	NM_172518.2		213499	40254216	NM_172518.2	Fbxo42	NP_766106.2	ILMN_2657190	003870180	S	5722	TGGTGCTGTGAGTGATGTTTCCCATACAACTCAGGGGTGCCAGGCGGCTC	4	+	140759783-140759832	4qD3	Mus musculus F-box protein 42 (Fbxo42), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		6720460I06Rik; mKIAA1332	6720460I06Rik; mKIAA1332
Mus musculus	RefSeq	ILMN_201123	ILMN_201123	LOC384836	XM_357889.1	XM_357889.1			38089294	XM_357889.1	LOC384836		ILMN_1252259	005890307	S	276	CACACTTGTGGCTGCTGCCCCTGTAGGCAAGCCAAGGCTGCTTTGTAGCC										
Mus musculus	RefSeq	ILMN_200336	ILMN_200336	LOC386257	XM_359143.1	XM_359143.1			38081342	XM_359143.1	LOC386257		ILMN_1218299	004830184	S	686	CAGGTGAAGTTCTATCCAGAGCAATTAGACAACAAAAGGAGCTCAAGGGG										
Mus musculus	RefSeq	ILMN_195404	ILMN_195404	WASF3	NM_145155.3	NM_145155.3		245880	150456420	NM_145155.3	Wasf3	NP_660137.1	ILMN_2515285	004780167	S	2473	GTACGATCGTTTGCTTTCTCTATCTTGGCGCTTGCAACCGAGAGCGGCCA				5qG3	Mus musculus WAS protein family, member 3 (Wasf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Wave3; Scar3	Wave3; Scar3
Mus musculus	Riken	ILMN_204631	ILMN_204631	GBE1	ri|C730047F11|PX00087B06|AK050423|3305					AK050423	Gbe1		ILMN_1258517	001690064	S	3100	TAGCAAATGGCACATGAAGCTCTCTCTGAAGTAGAATGGACTCAGCAGCC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxyl group in a similar glucan chain [goid 3844] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221846	ILMN_221846	FRAS1	NM_175473.3	NM_175473.3		231470	126157514	NM_175473.3	Fras1	NP_780682.3	ILMN_2774370	003870148	S	12186	CCACGATGTGCCTTTCGAGGCTCACTTTGCTTCCGAGTTGCCCGATTTCC	5	+	97209076-97209125	5qE3	Mus musculus Fraser syndrome 1 homolog (human) (Fras1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA1500; E130113P14Rik; bl	mKIAA1500; E130113P14Rik; bl
Mus musculus	RefSeq	ILMN_219730	ILMN_219730	DOK7	NM_172708.3	NM_172708.3		231134	146198807	NM_172708.3	Dok7	NP_766296.1	ILMN_2712878	006960204	S	2222	GACGAGGTGACCACGATGACAGTTTGCACTAGCAGAACACTCTGCACTGG				5qB2	Mus musculus docking protein 7 (Dok7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]	The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IDA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IGI]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IDA]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]	MGC107606; A930013K19Rik; Dok-7	MGC107606; A930013K19Rik; Dok-7
Mus musculus	RefSeq	ILMN_217260	ILMN_217260	RGS18	NM_022881.2	NM_022881.2		64214	31981248	NM_022881.2	Rgs18	NP_075019.1	ILMN_2990103	003390451	S	1721	GAGAGGTGGTGAAAATCTATATCCACAAATTTGACAACTTTGACATCAGC	1	-	146515147-146515196	1qF	Mus musculus regulator of G-protein signaling 18 (Rgs18), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IPI]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IDA]; Inhibits signal transduction the GTPase activity of G-protein alpha subunits, thereby driving them into their inactive GDP-bound form [goid 16299] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC117531	MGC117531
Mus musculus	RefSeq	ILMN_224059	ILMN_240288	1600014C10RIK	NM_028166.3	NM_028166.3		72244	145864498	NM_028166.3	1600014C10Rik	NP_082442.1	ILMN_2773909	005090669	S	3001	AATAGTTTTAGTCAAATGTATGCTGTCTCTGAAGTGGGGTATCCCAACCT				7qB2	Mus musculus RIKEN cDNA 1600014C10 gene (1600014C10Rik), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI428873	AI428873
Mus musculus	RefSeq	ILMN_189308	ILMN_189308	TNNT1	NM_011618.1	NM_011618.1		21955	6755840	NM_011618.1	Tnnt1	NP_035748.1	ILMN_2460136	000620064	S	812	GAAGGGTCGAGTTGGAGGCCGCTGGAAGTGAGACTGCCAGGACATGACCT	7	-	4456337-4456356:4456357-4456386	7qA1	Mus musculus troponin T1, skeletal, slow (Tnnt1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	AW146156; Tnt; sTnT	AW146156; Tnt; sTnT
Mus musculus	RefSeq	ILMN_217430	ILMN_217430	CMAS	NM_009908.1	NM_009908.1		12764	22208853	NM_009908.1	Cmas	NP_034038.1	ILMN_2683128	001570202	S	1342	CAGCCATTTTGCATTGTTTTGATCAAGTCCCGAAGTGTAATCTGCAGGTG	6	+	142723903-142723952	6qG3	Mus musculus cytidine monophospho-N-acetylneuraminic acid synthetase (Cmas), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria [goid 9103] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CMP-N-acetylneuraminate, a substance composed of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid in glycosidic linkage with cytidine monophosphate [goid 6055] [evidence ISA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: CTP + N-acylneuraminate = diphosphate + CMP-N-acylneuraminate [goid 8781] [evidence ISA]	D6Bwg0250e; CMP-Neu5Ac; AW208911	D6Bwg0250e; CMP-Neu5Ac; AW208911
Mus musculus	RefSeq	ILMN_213983	ILMN_213983	CYP2D26	NM_029562.1	NM_029562.1		76279	13386413	NM_029562.1	Cyp2d26	NP_083838.1	ILMN_1227936	005080048	S	364	GGAGAGGACACTTCTGACCGCCCCCTAATGCCCATCTATAATCACATAGG	15	-	82620911-82620960	15qE1	Mus musculus cytochrome P450, family 2, subfamily d, polypeptide 26 (Cyp2d26), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	1300006E06Rik	1300006E06Rik
Mus musculus	RefSeq	ILMN_221717	ILMN_254904	ERBB2	NM_001003817.1	NM_001003817.1		13866	54873609	NM_001003817.1	Erbb2	NP_001003817.1	ILMN_2739424	002230672	S	4158	GCACACTGTTCAGCCCCAGAGGATTACAGACCCTGACTGCCCTGACAGAC	11	+	98298190-98298239	11qD	Mus musculus v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) (Erbb2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence NAS]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33088] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence NAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence ISO]	Erbb-2; HER2; c-neu; c-erbB2; HER-2; mKIAA3023; Neu	Erbb-2; HER2; c-neu; c-erbB2; HER-2; mKIAA3023; Neu
Mus musculus	RefSeq	ILMN_197625	ILMN_261328	KCNA10	NM_001081140.1	NM_001081140.1		242151	124487278	NM_001081140.1	Kcna10	NP_001074609.1	ILMN_1240294	005270451	S	1586	TCCCAGGAGAACTTGACAAAATCCTCAACAGCATGGGCTCCAGAATGGGG	3	+	106998399-106998448	3qF2.3	Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 10 (Kcna10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence ISO]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence ISO]	Gm1962	Gm1962
Mus musculus	RefSeq	ILMN_261328	ILMN_261328	KCNA10	NM_001081140.1	NM_001081140.1		242151	124487278	NM_001081140.1	Kcna10	NP_001074609.1	ILMN_3069046	002650736	I	876	AGAGTTCCGAGAGGACAGGGAGCTGAAGGTGGTCAGAGACCCCAGCATCA	3	+	106997689-106997738	3qF2.3	Mus musculus potassium voltage-gated channel, shaker-related subfamily, member 10 (Kcna10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence ISO]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence ISO]	Gm1962	Gm1962
Mus musculus	RefSeq	ILMN_211651	ILMN_211651	SOCS3	NM_007707.2	NM_007707.2		12702	31982458	NM_007707.2	Socs3	NP_031733.1	ILMN_2618176	001570594	S	2371	CCCCACTCAGGCCTTCGAGGCTGTCTGAAGATGCTTGAAAAACTCAACCA	11	-	117827500-117827549	11qE2	Mus musculus suppressor of cytokine signaling 3 (Socs3), mRNA.		Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IGI]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of insulin receptor signaling [goid 46627] [evidence IDA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	EF-10; Cish3; SSI-3; SOCS-3; CIS3	EF-10; Cish3; SSI-3; SOCS-3; CIS3
Mus musculus	RefSeq	ILMN_196924	ILMN_196924	LOC241084	XM_136686.3	XM_136686.3			38049614	XM_136686.3	LOC241084		ILMN_1213114	001450523	S	1568	CAGACAGTTCTGTTCCTGCGGTTGCTGTGAGCCATGTGGAGAAATCTGCG										
Mus musculus	MEEBO	ILMN_195810	ILMN_195810	1700018G05RIK	scl54724.3.1_13						1700018G05Rik		ILMN_2518930	006520239	S	6	CTGAAGCTGAGACCAGTGGAATCCTAGATACTGGGCCGGGCCAAGGACTG										
Mus musculus	RefSeq	ILMN_250922	ILMN_250922	NTN4	NM_021320.2	NM_021320.2		57764	34328256	NM_021320.2	Ntn4	NP_067295.1	ILMN_2959863	007050397	S	1716	GCTGGGAATGGGAGGATGAGCAAGGATTTTCTGCCCTCCGACACTCAGGT	10	+	93196986-93197033:93201629-93201630	10qC2	Mus musculus netrin 4 (Ntn4), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence ISS]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190390	ILMN_190390	ZFP496	scl0268417.1_220				31982134	NM_172941	Zfp496		ILMN_1220340	004850129	S	2	GATAGGAGGTTTGGGAAATGAGTTCAAGGCCTCTGGTGCTCTCTGTCCTG										
Mus musculus	RefSeq	ILMN_234448	ILMN_234448	GLIPR2	NM_027450.3	NM_027450.3		384009	118130367	NM_027450.3	Glipr2	NP_081726.1	ILMN_3053593	003940639	I	1801	AACCACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGGATCCC	4	+	43991772-43991821	4qB1	Mus musculus GLI pathogenesis-related 2 (Glipr2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			5730414A08Rik; GAPR-1; C77180	5730414A08Rik; GAPR-1; C77180
Mus musculus	RefSeq	ILMN_199864	ILMN_234448	GLIPR2	NM_027450.3	NM_027450.3		384009	118130367	NM_027450.3	Glipr2	NP_081726.1	ILMN_1239830	005900424	S	385	GGAAGAATACCAAGAAGATAGGCGTGGGGAAGGCATCTGCGAGTGACGGG	4	+	43990356-43990405	4qB1	Mus musculus GLI pathogenesis-related 2 (Glipr2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			5730414A08Rik; GAPR-1; C77180	5730414A08Rik; GAPR-1; C77180
Mus musculus	RefSeq	ILMN_234448	ILMN_234448	GLIPR2	NM_027450.3	NM_027450.3		384009	118130367	NM_027450.3	Glipr2	NP_081726.1	ILMN_3130350	004230452	A	1227	GCATCCTCCAGGATTCCCTAATAGAACTGCCAAAGAGCAAATGGAGATGG	4	+	43991198-43991247	4qB1	Mus musculus GLI pathogenesis-related 2 (Glipr2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			5730414A08Rik; GAPR-1; C77180	5730414A08Rik; GAPR-1; C77180
Mus musculus	RefSeq	ILMN_243901	ILMN_243901	OLFR746	NM_146298.1	NM_146298.1		258295	22129688	NM_146298.1	Olfr746	NP_666410.1	ILMN_2780656	004120577	S	624	TCTCACTGGTTTGTACATCCTTGGATCTTATGCCTTGGTGCTCAGAGCTG	14	+	51273537-51273586	14qC1	Mus musculus olfactory receptor 746 (Olfr746), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR106-12	MOR106-12
Mus musculus	RefSeq	ILMN_209899	ILMN_209899	SLC16A8	NM_020516.2	NM_020516.2		57274	31982695	NM_020516.2	Slc16a8	NP_065262.1	ILMN_2926057	007050097	S	1670	GAAGGCATGAAACTGTGGCTTCCTCTCTGAGGGCCTGGTACATGGGGAGC	15	-	79081517-79081557:79081558-79081566	15qE1	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 8 (Slc16a8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism [goid 15355] [evidence IEA]	Mct3	Mct3
Mus musculus	RefSeq	ILMN_186966	ILMN_232312	MAGI3	NM_133853.2	NM_133853.2		99470	118129792	NM_133853.2	Magi3	NP_598614.1	ILMN_1227237	002570543	S	3933	GGAGAAAGTAAAGGTCGGCTCACCATTAAGGCGGGCTCTGGACAAGATCC	3	-	103819492-103819541	3qF2.2	Mus musculus membrane associated guanylate kinase, WW and PDZ domain containing 3 (Magi3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI120132; mKIAA1634; 4732496O19Rik; AA407180; 6530407C02Rik	AI120132; mKIAA1634; 4732496O19Rik; AA407180; 6530407C02Rik
Mus musculus	RefSeq	ILMN_186966	ILMN_232312	MAGI3	NM_133853.2	NM_133853.2		99470	118129792	NM_133853.2	Magi3	NP_598614.1	ILMN_1218573	000380068	S	3405	CCGGTCTGTGCTCCTACGTGAAACCTGAGCAACATTAAGGCTTTCAGGGC	3	-	103820553-103820565:103820566-103820602	3qF2.2	Mus musculus membrane associated guanylate kinase, WW and PDZ domain containing 3 (Magi3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI120132; mKIAA1634; 4732496O19Rik; AA407180; 6530407C02Rik	AI120132; mKIAA1634; 4732496O19Rik; AA407180; 6530407C02Rik
Mus musculus	Riken	ILMN_202863	ILMN_202863	2810482M11RIK	ri|3230401P16|PX00010C04|AK028289|3820					AK028289	2810482M11Rik		ILMN_1236384	004120288	S	926	AGAAGATTGGCACCATTAGCCTTTACCGCGCCCAGGACAGCAACCAGCTC										
Mus musculus	MEEBO	ILMN_191496	ILMN_191496	A230084N10	scl33898.6.455_27						A230084N10		ILMN_2479575	005130634	S	12	TCAGGTGACAGTCCATTGTATGAATGCAGCATAGTTTCCAGTGTTCATTC										
Mus musculus	RefSeq	ILMN_200423	ILMN_200423	LOC384276	XM_357535.1	XM_357535.1			38081790	XM_357535.1	LOC384276		ILMN_2538707	007210195	S	834	ACCCTACGGGCCAACCACAGACCAGAAAAATCAACTAGACTACGGGACCC										
Mus musculus	RefSeq	ILMN_221973	ILMN_235780	SERPINA3F	NM_001033335.2	NM_001033335.2		238393	142368572	NM_001033335.2	Serpina3f	NP_001028507.1	ILMN_2742861	004540082	S	2066	CCCCTAGCACTCCTAATCAGGACAGAGAAGTCGCCTAACCCTAAGTGTCT	12	+	105459192-105459241	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 3F (Serpina3f), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	spi2 (2a1); BC049975; 2A1	spi2 (2a1); BC049975; 2A1
Mus musculus	RefSeq	ILMN_214264	ILMN_257205	NDUFS3	NM_026688.2	NM_026688.2		68349	141801183	NM_026688.2	Ndufs3	NP_080964.1	ILMN_2747897	001260450	S	487	CTAGGATTCGTGTGAAGACCTATGCAGATGAGCTGACACCCATTGACTCT	2	-	90738835-90738884	2qE1	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 3 (Ndufs3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	0610010M09Rik	0610010M09Rik
Mus musculus	RefSeq	ILMN_220844	ILMN_220844	4930448F12RIK	XM_127223.3	XM_127223.3		73992	94394724	XM_127223.3	4930448F12Rik	XP_127223.1	ILMN_1248940	006100088	S	782	TCACAGCAAGGGTGCCTTTAATGCTCCAGACTTTGCTGCATGGAAAAGTC	13	-	18176808-18176857	13qA2	PREDICTED: Mus musculus RIKEN cDNA 4930448F12 gene (4930448F12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209812	ILMN_209812	OLFR187	NM_146322.1	NM_146322.1		258319	22129648	NM_146322.1	Olfr187	NP_666434.1	ILMN_2599440	000380370	S	777	GCACCCTGCATCTTCAGAAGTAGATGATCAAGACATGATAGACTCTCTGT	16	-	59035735-59035784	16qC1.3	Mus musculus olfactory receptor 187 (Olfr187), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR183-8	MOR183-8
Mus musculus	RefSeq	ILMN_209043	ILMN_209043	9530058B02RIK	NM_026633.3	NM_026633.3		68241	146141127	NM_026633.3	9530058B02Rik	NP_080909.1	ILMN_2592010	000270612	S	317	GACCCAAGAGACCTACACAGTGGCCCACGAGGAGAACGTCCGATTTGTGT				17qA3.3	Mus musculus RIKEN cDNA 9530058B02 gene (9530058B02Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_215697	ILMN_215697	POMT1	NM_145145.1	NM_145145.1		99011	21553106	NM_145145.1	Pomt1	NP_660127.1	ILMN_1224767	005960747	S	2226	CGCTGGAAAGACAGCTGGGATATTCTGATCCGAAAGTAATAGAGAACAAG	2	+	32109926-32109964:32109965-32109975	2qB	Mus musculus protein-O-mannosyltransferase 1 (Pomt1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 30] [evidence IEA]; Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein [goid 4169] [evidence IEA]	AI505244	AI505244
Mus musculus	RefSeq	ILMN_215697	ILMN_215697	POMT1	NM_145145.1	NM_145145.1		99011	21553106	NM_145145.1	Pomt1	NP_660127.1	ILMN_2694092	003120097	S	240	ATTTCCTTCTACATGAAGCGCATCTTCTTTCTGGATGACAGTGGGCCACC	2	+	32095975-32096024	2qB	Mus musculus protein-O-mannosyltransferase 1 (Pomt1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 30] [evidence IEA]; Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein [goid 4169] [evidence IEA]	AI505244	AI505244
Mus musculus	RefSeq	ILMN_215697	ILMN_215697	POMT1	NM_145145.1	NM_145145.1		99011	21553106	NM_145145.1	Pomt1	NP_660127.1	ILMN_2662545	006770500	S	106	AACGGCCTCTAGTGGTGACTGTTGACATCAATTTGAACTTGGTAGCTCTG	2	+	32092926-32092975	2qB	Mus musculus protein-O-mannosyltransferase 1 (Pomt1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a mannosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 30] [evidence IEA]; Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein [goid 4169] [evidence IEA]	AI505244	AI505244
Mus musculus	RefSeq	ILMN_190994	ILMN_240471	NFYA	NM_010913.1	NM_010913.1		18044	6754847	NM_010913.1	Nfya	NP_035043.1	ILMN_2625993	004210687	S	2136	GAATCCTTATATTGCCTGAAGAAGCACTGTTGAGCTAGCTGTCTTGGCTG	17	-	48527549-48527598	17qC	Mus musculus nuclear transcription factor-Y alpha (Nfya), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	AA407810; Cbf-b; SEZ10; SEZ-10	AA407810; Cbf-b; SEZ10; SEZ-10
Mus musculus	RefSeq	ILMN_218755	ILMN_218755	CDH24	NM_199470.1	NM_199470.1		239096	41054975	NM_199470.1	Cdh24	NP_955764.1	ILMN_2699800	000010612	S	2473	CCGGCCCCGCCGAGCCACTGGACGACTGGGGTCCACTCTTCCGCACTCTG	14	-	55250988-55251037	14qC3	Mus musculus cadherin-like 24 (Cdh24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence ISO]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC67331; 1700040A22Rik	MGC67331; 1700040A22Rik
Mus musculus	RefSeq	ILMN_217963	ILMN_217963	SYNGR4	NM_021482.2	NM_021482.2		58867	120587010	NM_021482.2	Syngr4	NP_067457.2	ILMN_3070294	006980678	I	135	ACAGGAAGTGGTGCCCAGAAAGCAGCACCCAACACCCCTGCCCCTACCTC	7	-	53151181-53151230	7qB4	Mus musculus synaptogyrin 4 (Syngr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700016O14Rik	1700016O14Rik
Mus musculus	RefSeq	ILMN_223587	ILMN_217963	SYNGR4	NM_021482.2	NM_021482.2		58867	120587010	NM_021482.2	Syngr4	NP_067457.2	ILMN_2766123	005260446	S	580	TCCTAGCCAGCCAGTGGCAGCATTCGAAGTCCAAGCACTTCCTCTTGGGG	7	-	53142790-53142839	7qB4	Mus musculus synaptogyrin 4 (Syngr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700016O14Rik	1700016O14Rik
Mus musculus	RefSeq	ILMN_217963	ILMN_217963	SYNGR4	NM_021482.2	NM_021482.2		58867	120587010	NM_021482.2	Syngr4	NP_067457.2	ILMN_1223537	002320358	S	684	ATACTCCAGGCCTACCTAGCCTTCCAGGACCTCCGAGACGAGGCTCCAGT	7	-	53142445-53142494	7qB4	Mus musculus synaptogyrin 4 (Syngr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700016O14Rik	1700016O14Rik
Mus musculus	RefSeq	ILMN_217963	ILMN_217963	SYNGR4	NM_021482.2	NM_021482.2		58867	120587010	NM_021482.2	Syngr4	NP_067457.2	ILMN_3148912	003390440	A	802	CCTCCAACCCTCCCATCACAGGCCCCAACAGTCTGAGTTACACCAGCTCA	7	-	53142327-53142376	7qB4	Mus musculus synaptogyrin 4 (Syngr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700016O14Rik	1700016O14Rik
Mus musculus	MEEBO	ILMN_190425	ILMN_190425	YSK4	scl0022625.1_121				51712473	XM_136210	Ysk4		ILMN_1242250	006450292	S	2	AGTAGCTTATCTAGGGACGTGCTTGGAGGAGAACACTCTGAGCATCTTCC										
Mus musculus	RefSeq	ILMN_200233	ILMN_200233	LOC386021	XM_359035.1	XM_359035.1			38081019	XM_359035.1	LOC386021		ILMN_1241612	003890286	S	1392	CCTAGCCAAATGGATCGACCTGGAGGGCATCATCCTGAGTGAGGTAACAC										
Mus musculus	RefSeq	ILMN_233041	ILMN_233041	HS3ST6	NM_001012402.1	NM_001012402.1		328779	60223080	NM_001012402.1	Hs3st6	NP_001012402.1	ILMN_3160653	002100768	S	926	TGCTACTAAGGGCTTCCCCTGCCTCAAAAAGGCCCAGGGTAGTGGGAGAC	17	+	24895335-24895384	17qA3.3	Mus musculus heparan sulfate (glucosamine) 3-O-sulfotransferase 6 (Hs3st6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate, with a substrate consensus sequence of Glc(N2S>NAc)+/-6S GlcA GlcN2S*+/-6S GlcA>IdoA+/-2S Glc(N2S/NAc)+/-6S [goid 8467] [evidence IDA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212184	ILMN_212184	SSTR4	NM_009219.3	NM_009219.3		20608	134032000	NM_009219.3	Sstr4	NP_033245.2	ILMN_1256912	005860743	S	1183	CCAGCAGGAGCCCGTGCAAGCAGAACCTGGCTGCAAGCAAGTCCCTTTCA	2	+	148222295-148222344	2qG3	Mus musculus somatostatin receptor 4 (Sstr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [evidence IEA]	sst4; Smstr4	sst4; Smstr4
Mus musculus	RefSeq	ILMN_184128	ILMN_228252	SESN3	NM_030261.4	NM_030261.4		75747	142349199	NM_030261.4	Sesn3	NP_084537.2	ILMN_2622997	000610594	S	1378	ATGAGAAGTTTCGAATGGTCTACAATCTCACCTACAACACAATGGCCACC	9	+	14125586-14125635	9qA1	Mus musculus sestrin 3 (Sesn3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		5630400E15Rik; MGC7182; BC003348; SEST3	5630400E15Rik; MGC7182; BC003348; SEST3
Mus musculus	Riken	ILMN_203046	ILMN_203046	KOR1, GPCR	ri|A230102K24|PX00063M09|AK039151|2848					AK039151	KOR1, GPCR		ILMN_1216991	005820735	S	2457	TGCAAGTGGCACCTCCTTCACCCCAGCTTGACTTCTGGATGCAGGCCTCA										
Mus musculus	RefSeq	ILMN_191005	ILMN_191005	TNFSF14	NM_019418.2	NM_019418.2		50930	133892635	NM_019418.2	Tnfsf14	NP_062291.1	ILMN_1223954	003180241	S	267	GCTGGCCACTCAGGGCTGGTTTCTCCTGAGACTGCATCAACGTCTTGGAG	17	-	57333299-57333348	17qD	Mus musculus tumor necrosis factor (ligand) superfamily, member 14 (Tnfsf14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	LTg; HVEM-L; Ly113; LIGHT; HVEML	LTg; HVEM-L; Ly113; LIGHT; HVEML
Mus musculus	MEEBO	ILMN_221909	ILMN_221909	LOC380905	scl0380905.12_12	XM_354818.1			38076313	XM_354818.1	LOC380905		ILMN_1245059	003190706	S	725	GAGAAGAAGATGATGTCCTTATTGTAGATCTGCAGAAACCACCAACAAAT										
Mus musculus	MEEBO	ILMN_212209	ILMN_212209	EGR2	scl013654.4_67	NM_010118.1			23956051	NM_010118.1	Egr2		ILMN_2623983	007330026	S	2522	GGTCTGCATGTGTACAGGATGCCTTACTATGGGAACAGAAAAATCACTCC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21569] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Division of the brain into a series of semi-repetitive parts or segments [goid 35284] [evidence IMP]; The process that gives rise to rhombomere 3. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21660] [evidence IMP]; The process that gives rise to rhombomere 5. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21666] [evidence IMP]; The process that contributes to the act of creating the structural organization of the facial nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities [goid 21612] [evidence IGI]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IGI]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]; The specific actions or reactions of an organism that recur with measured regularity [goid 7622] [evidence IDA]; The specific actions or reactions of an organism that recur with measured regularity [goid 7622] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	MEEBO	ILMN_195952	ILMN_195952	CP	scl23358.23.1_77				6680996	NM_007752	Cp		ILMN_2520239	006200112	S	5	CTTCGTCTCAGCAGTTCCACCCAGAAGCCAGCATTCCAAAGCAAAGCTCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O [goid 4322] [evidence IDA]		
Mus musculus	MEEBO	ILMN_195952	ILMN_195952	CP	scl23358.23.1_77				6680996	NM_007752	Cp		ILMN_1218681	003520592	S	3000	CAAGGCCTCACAATGCACGTGAAAGATGAAGTCAACTGGTATCTGATGGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O [goid 4322] [evidence IDA]		
Mus musculus	RefSeq	ILMN_191779	ILMN_328330	LOC675813	XR_032773.1	XR_032773.1		675813	149272375	XR_032773.1	LOC675813		ILMN_1253910	001470402	S	317	TTGAGCCGGGAGTTGAGGTTGAAGTCACCATTGCAGATGCCTAAGACAAC					PREDICTED: Mus musculus similar to ribosomal protein S20 (LOC675813), misc RNA.					
Mus musculus	RefSeq	ILMN_223030	ILMN_223030	MEPCE	NM_144913.3	NM_144913.3		231803	119672919	NM_144913.3	Mepce	NP_659162.3	ILMN_2885348	001400110	S	2919	AAGGGGGAATGTCGAGTTCTCCAGGCCCTTCCTCCTGTTCTCAGGGGACT	5	-	138227195-138227244	5qG2	Mus musculus methylphosphate capping enzyme (Mepce), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC28888; Bcdin3; D5Wsu46e; MGC30590	MGC28888; Bcdin3; D5Wsu46e; MGC30590
Mus musculus	RefSeq	ILMN_222827	ILMN_222827	GLB1L2	NM_153803.1	NM_153803.1		244757	24418924	NM_153803.1	Glb1l2	NP_722498.1	ILMN_2755372	003520328	S	3115	CTCCTTGGCATGTCATTGCATTCAGAGCAGTCCAATCTCATGCTGGTAGT	9	-	26571150-26571199	9qA4	Mus musculus galactosidase, beta 1-like 2 (Glb1l2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A multimeric enzyme complex that in E. coli is a heterooctamer made up of four alpha subunits and four beta subunits. Catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides [goid 9341] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	MGC47419	MGC47419
Mus musculus	MEEBO	ILMN_212617	ILMN_212617	4933426K07RIK	scl40196.2.1_31	XM_147533.1			20880689	XM_147533.1	4933426K07Rik		ILMN_2628476	005550066	S	1192	CAAGGCTCTGCCACAACTCACCCTCTCAGTCTAGGATCTCGTCACCAAGT										
Mus musculus	RefSeq	ILMN_221412	ILMN_221412	4930528F23RIK	XM_128478.6	XM_128478.6		75178	149268668	XM_128478.6	4930528F23Rik	XP_128478.3	ILMN_1217280	006290113	S	699	CTTGCAGATCCTACTGAGGCAAGCAGGAACCTGGCTAGACAAGGACATAC	17	+	24976429-24976478	17qA3.3	PREDICTED: Mus musculus RIKEN cDNA 4930528F23 gene (4930528F23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215096	ILMN_215096	PREP	NM_011156.2	NM_011156.2		19072	31560555	NM_011156.2	Prep	NP_035286.1	ILMN_2973020	004480112	S	2558	AGACTCCTGAATTCGTAAGGGATCTAATAAGGTCATAGTTGGGCATACCC	10	+	44878640-44878689	10qB2	Mus musculus prolyl endopeptidase (Prep), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISS]	AI450383; PEP; D10Wsu136e; AI047692	AI450383; PEP; D10Wsu136e; AI047692
Mus musculus	RefSeq	ILMN_215096	ILMN_215096	PREP	NM_011156.2	NM_011156.2		19072	31560555	NM_011156.2	Prep	NP_035286.1	ILMN_1259561	002630647	S	2196	CTCGGATATGTTTGCGTTCATAGCACGGTGCCTGAACATCGAGTGGATCC	10	+	44878278-44878327	10qB2	Mus musculus prolyl endopeptidase (Prep), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISS]	AI450383; PEP; D10Wsu136e; AI047692	AI450383; PEP; D10Wsu136e; AI047692
Mus musculus	RefSeq	ILMN_246723	ILMN_246723	DMN	NM_201639.1	NM_201639.1		233335	42734398	NM_201639.1	Dmn	NP_964001.1	ILMN_3053693	006450020	I	4308	AAAACATTTGTACTTGATGGTTCCGTGGCGTCCCCTGGGCTGGTTGGGGG	7	-	74878506-74878555	7qC	Mus musculus desmuslin (Dmn), transcript variant 1, mRNA.				AI852401; 4930412K21Rik; MGC56976; Synemin; E130104F11; Syn	AI852401; 4930412K21Rik; MGC56976; Synemin; E130104F11; Syn
Mus musculus	RefSeq	ILMN_194499	ILMN_245175	BEST1	NM_011913.1	NM_011913.1		24115	50233764	NM_011913.1	Best1	NP_036043.1	ILMN_1212602	000940068	S	1771	CCAGGAGTGTGTTCCCACGACAGTCTAGCATGTAACTCAGAACCAAGAGT	19	-	10059747-10059796	19qA	Mus musculus bestrophin 1 (Best1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride ions across an epithelium [goid 30321] [pmid 17003041] [evidence IEP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Vmd2; mBest1; BMD	Vmd2; mBest1; BMD
Mus musculus	MEEBO	ILMN_185123	ILMN_185123	USP48	scl24801.31.1_2				51709536	XM_485461	Usp48		ILMN_2505095	006020528	S	10	GGTAGGAAAGTCTTCCTTGCGTAGCTGGCGCCAGCTGGCTCTTGAACAAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	Riken	ILMN_204523	ILMN_204523	B230350I06RIK	ri|B230350I06|PX00160P12|AK046198|1208					AK046198	B230350I06Rik		ILMN_1244746	006020014	S	1061	GGTCCTGGGGCACAGATAGCTAAGAGCCGTGTCTACTACCCTGGTCTTGG										
Mus musculus	RefSeq	ILMN_200987	ILMN_200987	GM1446	XM_357796.4	XM_357796.4		384695	149256370	XM_357796.4	Gm1446	XP_357796.4	ILMN_1250330	006400450	S	902	TAAGGCTTGTCAGTGTGGTTCTGGCTGCAGTCTTCCCCAGTATCTGCCCC	7	+	21948021-21948070	7qA3	PREDICTED: Mus musculus gene model 1446, (NCBI) (Gm1446), mRNA.					
Mus musculus	RefSeq	ILMN_222496	ILMN_222496	TLL2	NM_011904.1	NM_011904.1		24087	6755806	NM_011904.1	Tll2	NP_036034.1	ILMN_2750379	002760709	S	3952	CCCAGGTTGCTGAGAGGACGCCTAGCTTCACCCAATATTTCTCCTCTGCT	19	-	41136720-41136769	19qC3	Mus musculus tolloid-like 2 (Tll2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222496	ILMN_222496	TLL2	NM_011904.1	NM_011904.1		24087	6755806	NM_011904.1	Tll2	NP_036034.1	ILMN_2927910	004730397	S	4209	CCACATTATCTAAGAGCCACCGTCTCTGGAACAAGGTGGTCTGTGGTACG	19	-	41136463-41136512	19qC3	Mus musculus tolloid-like 2 (Tll2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221668	ILMN_221668	SERPINB9C	NM_011453.2	NM_011453.2		20707	31340614	NM_011453.2	Serpinb9c	NP_035583.1	ILMN_2919325	006860092	S	1243	GCTCTGTGAGAATGGACAAGTAGGGGCAAAGCACCTTCCACAATAAGGGC	13	-	33157337-33157386	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 9c (Serpinb9c), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ovalbumin; Spi11; NK9; 3830421J05Rik	ovalbumin; Spi11; NK9; 3830421J05Rik
Mus musculus	RefSeq	ILMN_221976	ILMN_221976	GPR176	NM_201367.2	NM_201367.2		381413	118130943	NM_201367.2	Gpr176	NP_958755.1	ILMN_2742912	001770634	S	3586	CCTGAGAAGAACCTGTGAAATAAACCTGTGTTGCTGTCACCGTCCTGACA	2	-	118103001-118103050	2qE5	Mus musculus G protein-coupled receptor 176 (Gpr176), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gm1012; MGC62396	Gm1012; MGC62396
Mus musculus	Riken	ILMN_204410	ILMN_204410	A230005A19RIK	ri|A230005A19|PX00126N21|AK038408|1400					AK038408	A230005A19Rik		ILMN_2564767	006400064	S	855	AGAGGTCCCATTTCCCACATGGTTATCTGTGTGGCAGAGGCCTGAGGCAC										
Mus musculus	RefSeq	ILMN_214614	ILMN_214614	OLFR38	NM_146986.1	NM_146986.1		258988	22128960	NM_146986.1	Olfr38	NP_667197.1	ILMN_2649904	000160050	S	816	GTTGATGTCTCTGTTCTATGCTATCTTGACACCCATGCTGAACCCCATGA	6	+	42712868-42712917	6qB2.1	Mus musculus olfactory receptor 38 (Olfr38), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	18A; MOR257-2	18A; MOR257-2
Mus musculus	RefSeq	ILMN_197682	ILMN_197682	LOC239416	XM_139484.2	XM_139484.2			38077315	XM_139484.2	LOC239416		ILMN_1228373	007380482	S	1130	TTGTTGACTGGTCGGGGCAGCAAACCCTCATCATTGGCAGGCTGGAAGAG										
Mus musculus	MEEBO	ILMN_188411	ILMN_188411	4833417J20RIK	scl6143.1.1_9						4833417J20Rik		ILMN_2452455	006550390	S	1	CCAGAGCACTGTATAGAATCCTTCTCAACGATATGGGAATGCAAGGTGCA										
Mus musculus	RefSeq	ILMN_199404	ILMN_199404	OLFR1240	NM_146808.1	NM_146808.1		258804	22129238	NM_146808.1	Olfr1240	NP_667019.1	ILMN_2711999	004180259	S	859	CTGAGAAATGCGGAGATGAAAAACAGTATGAAAAAACTTTGGTGTGAAAG	2	-	89279526-89279575	2qE1	Mus musculus olfactory receptor 1240 (Olfr1240), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-8	MOR231-8
Mus musculus	RefSeq	ILMN_209751	ILMN_209751	NPEPPS	NM_008942.2	NM_008942.2		19155	68226730	NM_008942.2	Npepps	NP_032968.2	ILMN_1238071	006940609	S	2429	GCTGATATGCAAGAAGAGAAAAACAGAATTGAAAGAGTTCTTGGGGCTAC	11	-	97075130-97075179	11qD	Mus musculus aminopeptidase puromycin sensitive (Npepps), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]	MP100; MGC102199; Psa; goku; R74825	MP100; MGC102199; Psa; goku; R74825
Mus musculus	RefSeq	ILMN_253245	ILMN_253245	DNALI1	NM_175223.2	NM_175223.2		75563	31340647	NM_175223.2	Dnali1	NP_780432.1	ILMN_2872896	003440707	S	849	TGGGTCTCAGCAGGCCCCTTGCCCCATAAGCCCATTGTAATAAAAGCCAG	4	-	124558830-124558879	4qD2.2	Mus musculus dynein, axonemal, light intermediate polypeptide 1 (Dnali1), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	AW049135; 1700023A09Rik	AW049135; 1700023A09Rik
Mus musculus	RefSeq	ILMN_192696	ILMN_328880	LOC100046350	XM_001476057.1	XM_001476057.1		100046350	149255577	XM_001476057.1	LOC100046350	XP_001476107.1	ILMN_1254636	006840132	S	147	AAACAGTAATGGAAACACCTATTTGAACTGGTACCTCCAGAAACCAGGCC					PREDICTED: Mus musculus similar to immunoglobulin kappa chain (LOC100046350), mRNA.					
Mus musculus	RefSeq	ILMN_213593	ILMN_213593	AMPD2	NM_028779.4	NM_028779.4		109674	133893240	NM_028779.4	Ampd2	NP_083055.1	ILMN_1234484	004200292	S	55	GAGCCGGATCCCTAATTGATTCCCAGAAAGTGGTGAAAGAACCCTAGGCG	3	-	107889441-107889490	3qF2.3	Mus musculus adenosine monophosphate deaminase 2 (isoform L) (Ampd2), mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]; Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [evidence IEA]	Ampd-2; 1200014F01Rik; AI552571	Ampd-2; 1200014F01Rik; AI552571
Mus musculus	RefSeq	ILMN_213593	ILMN_213593	AMPD2	NM_028779.4	NM_028779.4		109674	133893240	NM_028779.4	Ampd2	NP_083055.1	ILMN_2701534	005820133	S	3243	TGAAGTTCCAGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCA	3	-	107877337-107877386	3qF2.3	Mus musculus adenosine monophosphate deaminase 2 (isoform L) (Ampd2), mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]; Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [evidence IEA]	Ampd-2; 1200014F01Rik; AI552571	Ampd-2; 1200014F01Rik; AI552571
Mus musculus	RefSeq	ILMN_196366	ILMN_196366	TAOK1	NM_144825.2	NM_144825.2		216965	124358958	NM_144825.2	Taok1	NP_659074.2	ILMN_2523848	005550519	S	3569	TAGCAGTATGGGAGTCCGCAATAGCCCCCAGGCTTTGAGGCGGACAGCTT	11	-	77351454-77351503	11qB5	Mus musculus TAO kinase 1 (Taok1), mRNA. XM_918166 XM_925540 XM_925541	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA1361; 2810468K05Rik; D130018F14Rik; AU020252; MGC29021	mKIAA1361; 2810468K05Rik; D130018F14Rik; AU020252; MGC29021
Mus musculus	RefSeq	ILMN_186287	ILMN_196366	TAOK1	NM_144825.2	NM_144825.2		216965	124358958	NM_144825.2	Taok1	NP_659074.2	ILMN_2482290	007550370	S	12119	GGTGACTGTGCAGATGTGCATTTTCCTTTTGGTAGAAATGGTCCACAGCA	11	-	77342904-77342953	11qB5	Mus musculus TAO kinase 1 (Taok1), mRNA. XM_918166 XM_925540 XM_925541	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA1361; 2810468K05Rik; D130018F14Rik; AU020252; MGC29021	mKIAA1361; 2810468K05Rik; D130018F14Rik; AU020252; MGC29021
Mus musculus	RefSeq	ILMN_202435	ILMN_196366	TAOK1	NM_144825.2	NM_144825.2		216965	124358958	NM_144825.2	Taok1	NP_659074.2	ILMN_1259962	006380348	S	11134	ACCCTTCTGTAACCCAGGCTGGTCTTTGCTTTTACTGAACATCCAAACGT	11	-	77343889-77343938	11qB5	Mus musculus TAO kinase 1 (Taok1), mRNA. XM_918166 XM_925540 XM_925541	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA1361; 2810468K05Rik; D130018F14Rik; AU020252; MGC29021	mKIAA1361; 2810468K05Rik; D130018F14Rik; AU020252; MGC29021
Mus musculus	RefSeq	ILMN_186287	ILMN_196366	TAOK1	NM_144825.2	NM_144825.2		216965	124358958	NM_144825.2	Taok1	NP_659074.2	ILMN_2434235	001940519	S	6849	GGAGCTTTGTACATAGTCATTGTGATGTCTTGGCTGCCCGGACACCACGT	11	-	77348174-77348223	11qB5	Mus musculus TAO kinase 1 (Taok1), mRNA. XM_918166 XM_925540 XM_925541	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA1361; 2810468K05Rik; D130018F14Rik; AU020252; MGC29021	mKIAA1361; 2810468K05Rik; D130018F14Rik; AU020252; MGC29021
Mus musculus	Riken	ILMN_202529	ILMN_202529	2210010B09RIK	ri|2210010B09|ZX00081H07|AK008693|1644					AK008693	2210010B09Rik		ILMN_1223827	005690075	S	379	ACTACCAGAACCTGGCCTCAGCAGGATGTGAGGGCATCAAACCCAGTCTG								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_204689	ILMN_204689	A330008C21RIK	ri|A330008C21|PX00130P09|AK039253|890					AK039253	A330008C21Rik		ILMN_1227139	006400674	S	826	GGCTCCAAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTCAT										
Mus musculus	RefSeq	ILMN_211403	ILMN_240618	LOC667277	XM_001002804.1	XM_001002804.1		667277	94378098	XM_001002804.1	LOC667277	XP_001002804.1	ILMN_2694492	004480201	S	2563	AAATGTATCTGACCAATTGTTGATAAGCACTATGATTCTCATATAAAAAT	6	+	124531091-124531140	6qF2	PREDICTED: Mus musculus similar to complement component C1rb, transcript variant 2 (LOC667277), mRNA.					
Mus musculus	MEEBO	ILMN_196264	ILMN_196264	L3MBTL	scl19974.22.1_5				51706504	XM_485097	L3mbtl		ILMN_1237559	004810634	S	20	AGATGCGATGCCGTGAGTTACAGGGAAGAGAGTGCCAGGTTTGAAGGCAG										
Mus musculus	RefSeq	ILMN_190885	ILMN_319583	ARFGEF2	NM_001085495.1	NM_001085495.1		99371	148229139	NM_001085495.1	Arfgef2	NP_001078964.1	ILMN_2474111	000990114	S	8521	TGTCTCAGAGTTAGTTACCAGCTTCCTTGATTTCATCTATACACAATGAT				2qH3	Mus musculus ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) (Arfgef2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISO]	AW493672; AI463430; E230011G24Rik; BIG2	AW493672; AI463430; E230011G24Rik; BIG2
Mus musculus	RefSeq	ILMN_217275	ILMN_217275	PTPN11	NM_011202.2	NM_011202.2		19247	37360980	NM_011202.2	Ptpn11	NP_035332.1	ILMN_3001598	004880431	S	5329	CAAGAGACGCACTCAGCTGACTTTTTGCCCACGCATATCATGTAGTCTGG	5	-	121580706-121580755	5qF	Mus musculus protein tyrosine phosphatase, non-receptor type 11 (Ptpn11), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence ISS]	A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of proteins from the nucleus to the cytoplasm [goid 46825] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cortisol from a cell or group of cells [goid 51463] [evidence IMP]; Any process that decreases or stops the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60125] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs [goid 48609] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction [goid 9967] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	Interacting selectively with a receptor for peptide hormones [goid 51428] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IMP]	SH-PTP2; SHP-2; SAP-2; PTP2C; PTP1D; Syp; 2700084A17Rik; AW536184; SH-PTP3; Shp2	SH-PTP2; SHP-2; SAP-2; PTP2C; PTP1D; Syp; 2700084A17Rik; AW536184; SH-PTP3; Shp2
Mus musculus	RefSeq	ILMN_217275	ILMN_217275	PTPN11	NM_011202.2	NM_011202.2		19247	37360980	NM_011202.2	Ptpn11	NP_035332.1	ILMN_1245874	003990026	S	4773	CAGATGCGCTCGGGAAGGAAGCACAGGCAGAAGTGTGGGCTCGTTCTACA	5	-	121581262-121581311	5qF	Mus musculus protein tyrosine phosphatase, non-receptor type 11 (Ptpn11), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence ISS]	A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of proteins from the nucleus to the cytoplasm [goid 46825] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cortisol from a cell or group of cells [goid 51463] [evidence IMP]; Any process that decreases or stops the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60125] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs [goid 48609] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction [goid 9967] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	Interacting selectively with a receptor for peptide hormones [goid 51428] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IMP]	SH-PTP2; SHP-2; SAP-2; PTP2C; PTP1D; Syp; 2700084A17Rik; AW536184; SH-PTP3; Shp2	SH-PTP2; SHP-2; SAP-2; PTP2C; PTP1D; Syp; 2700084A17Rik; AW536184; SH-PTP3; Shp2
Mus musculus	RefSeq	ILMN_217275	ILMN_217275	PTPN11	NM_011202.2	NM_011202.2		19247	37360980	NM_011202.2	Ptpn11	NP_035332.1	ILMN_2743723	004640626	S	4780	CGCTCGGGAAGGAAGCACAGGCAGAAGTGTGGGCTCGTTCTACATTGTCC	5	-	121581255-121581304	5qF	Mus musculus protein tyrosine phosphatase, non-receptor type 11 (Ptpn11), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence ISS]	A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of proteins from the nucleus to the cytoplasm [goid 46825] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cortisol from a cell or group of cells [goid 51463] [evidence IMP]; Any process that decreases or stops the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60125] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs [goid 48609] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction [goid 9967] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	Interacting selectively with a receptor for peptide hormones [goid 51428] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IMP]	SH-PTP2; SHP-2; SAP-2; PTP2C; PTP1D; Syp; 2700084A17Rik; AW536184; SH-PTP3; Shp2	SH-PTP2; SHP-2; SAP-2; PTP2C; PTP1D; Syp; 2700084A17Rik; AW536184; SH-PTP3; Shp2
Mus musculus	RefSeq	ILMN_217275	ILMN_217275	PTPN11	NM_011202.2	NM_011202.2		19247	37360980	NM_011202.2	Ptpn11	NP_035332.1	ILMN_2681329	006420609	S	2147	ATTGTGGAAGCAGCTAAATTGTGCTCTGTATTTTCTACATTATGGGACTC	5	-	121583888-121583937	5qF	Mus musculus protein tyrosine phosphatase, non-receptor type 11 (Ptpn11), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence ISS]	A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of proteins from the nucleus to the cytoplasm [goid 46825] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cortisol from a cell or group of cells [goid 51463] [evidence IMP]; Any process that decreases or stops the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60125] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs [goid 48609] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction [goid 9967] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	Interacting selectively with a receptor for peptide hormones [goid 51428] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IMP]	SH-PTP2; SHP-2; SAP-2; PTP2C; PTP1D; Syp; 2700084A17Rik; AW536184; SH-PTP3; Shp2	SH-PTP2; SHP-2; SAP-2; PTP2C; PTP1D; Syp; 2700084A17Rik; AW536184; SH-PTP3; Shp2
Mus musculus	RefSeq	ILMN_221683	ILMN_221683	OLFR1499	NM_146796.1	NM_146796.1		258792	22129260	NM_146796.1	Olfr1499	NP_667007.1	ILMN_1215595	007550167	S	624	GGTGAATGCTTTAGTCATACTCACTTCCTACCTGCTTATCATCAAGACAG	19	-	13889405-13889454	19qA	Mus musculus olfactory receptor 1499 (Olfr1499), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR211-2	MOR211-2
Mus musculus	RefSeq	ILMN_220040	ILMN_220040	PIK3C2A	NM_011083.2	NM_011083.2		18704	145279205	NM_011083.2	Pik3c2a	NP_035213.2	ILMN_1252098	000010551	S	5168	CACTGCGGGAGAATTTCTTCTTGGGTGGAATAACCCTGCCACTGAAAGAT				7qF1	Mus musculus phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide (Pik3c2a), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IDA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate [goid 35005] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cpk-m	Cpk-m
Mus musculus	RefSeq	ILMN_205934	ILMN_248991	CDC14A	XM_991462.1	XM_991462.1		229776	94371189	XM_991462.1	Cdc14a	XP_996556.1	ILMN_1235352	004830671	S	3339	GTGGTGGTCCCATGCTGTTAGAGTTTGCTCACATGCAGGACAAGGCCCAC				3qG1	PREDICTED: Mus musculus CDC14 cell division cycle 14 homolog A (S. cerevisiae), transcript variant 1 (Cdc14a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192675	ILMN_247380	ZFP27	NM_001037707.1	NM_001037707.1		22689	83416318	NM_001037707.1	Zfp27	NP_001032796.1	ILMN_2490271	006040008	S	2767	GTTCACACCTCGGCAGTATGAGAAAGGACCCATTGAGGACACGTCTTATG	7	-	30679068-30679097:30679098-30679117	7qB1	Mus musculus zinc finger protein 27 (Zfp27), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mszf76; Zfp-27; mkr-4	mszf76; Zfp-27; mkr-4
Mus musculus	RefSeq	ILMN_247380	ILMN_247380	ZFP27	NM_001037707.1	NM_001037707.1		22689	83416318	NM_001037707.1	Zfp27	NP_001032796.1	ILMN_3117788	004920630	A	2706	TAAGTGTGTAGTCTGTGGGAAAGGCTTTGTGCAGAAGTCAGTGCTCAGCA	7	-	30679129-30679178	7qB1	Mus musculus zinc finger protein 27 (Zfp27), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mszf76; Zfp-27; mkr-4	mszf76; Zfp-27; mkr-4
Mus musculus	RefSeq	ILMN_213010	ILMN_213010	ARL4A	NM_007487.3	NM_007487.3		11861	87252732	NM_007487.3	Arl4a	NP_031513.1	ILMN_3144984	000830450	A	2987	GTGTCAGGGATCAAACTCTGGGCCTCCTGTATGTGAAGCAGTCATCAATG	12	-	40760498-40760547	12qB1	Mus musculus ADP-ribosylation factor-like 4A (Arl4a), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	Arl4; AI467555	Arl4; AI467555
Mus musculus	RefSeq	ILMN_213010	ILMN_213010	ARL4A	NM_007487.3	NM_007487.3		11861	87252732	NM_007487.3	Arl4a	NP_031513.1	ILMN_1255483	006420152	S	2855	TCAATTAAAAATTTAAGTTCAAAATGTATATCACCTATTAAAGCTATTAA	12	-	40760630-40760679	12qB1	Mus musculus ADP-ribosylation factor-like 4A (Arl4a), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	Arl4; AI467555	Arl4; AI467555
Mus musculus	RefSeq	ILMN_213010	ILMN_213010	ARL4A	NM_007487.3	NM_007487.3		11861	87252732	NM_007487.3	Arl4a	NP_031513.1	ILMN_3066763	007150541	I	61	GAGAGACACATCAGCCAATGTCCCTCCATTGGAATCCCGACTCCAGCCCG	12	-	40763853-40763902	12qB1	Mus musculus ADP-ribosylation factor-like 4A (Arl4a), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	Arl4; AI467555	Arl4; AI467555
Mus musculus	MEEBO	ILMN_216055	ILMN_216055	ACN9	scl071238.2_50	XM_355744.1			38083684	XM_355744.1	Acn9		ILMN_1254730	007000156	S	666	GAATTTGTTTTAAATTCTATCCCCATCAAGTGTTAGCCTCCTGATTTGTC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_188875	ILMN_188875	ZFP553	NM_146201.1	NM_146201.1		233887	22122756	NM_146201.1	Zfp553	NP_666313.1	ILMN_2854036	006110605	S	2204	GCCAGACTGATCTACAGAGAGTTCTAGGTAAGCCAGAACTCTTTGGTGAA	7	+	134380937-134380986	7qF3	Mus musculus zinc finger protein 553 (Zfp553), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C330013F15Rik; AI431057; BC026401; MGC31231; 2600009K23Rik	C330013F15Rik; AI431057; BC026401; MGC31231; 2600009K23Rik
Mus musculus	RefSeq	ILMN_188875	ILMN_188875	ZFP553	NM_146201.1	NM_146201.1		233887	22122756	NM_146201.1	Zfp553	NP_666313.1	ILMN_2456495	002850593	S	2087	CCCAGTTTTAAAATCCTACTGCCTCCTGTTAACACGCCCCTCAACTGGAC	7	+	134380820-134380869	7qF3	Mus musculus zinc finger protein 553 (Zfp553), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C330013F15Rik; AI431057; BC026401; MGC31231; 2600009K23Rik	C330013F15Rik; AI431057; BC026401; MGC31231; 2600009K23Rik
Mus musculus	RefSeq	ILMN_233464	ILMN_233464	OLFR1200	NM_001005227.1	NM_001005227.1		257887	52421323	NM_001005227.1	Olfr1200	NP_001005227.1	ILMN_2876794	000070343	S	944	GTAATTCTGCTCTGATGTTCCTAGGTCAGCTACTATCCAACAGGTCACAG	2	-	88607477-88607526	2qE1	Mus musculus olfactory receptor 1200 (Olfr1200), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR225-12	MOR225-12
Mus musculus	RefSeq	ILMN_216095	ILMN_216095	HPSE	NM_152803.3	NM_152803.3		15442	111186470	NM_152803.3	Hpse	NP_690016.1	ILMN_3006790	006130632	S	2299	CTGTGGTTTGGAAATGACGGTAAAGGAGCCGGTTGGCTGATTGGGAGACG				5qE4	Mus musculus heparanase (Hpse), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the cleavage of heparan sulfate; can degrade both heparan sulfate and heparin glycosaminoglycan chains [goid 30305] [evidence ISO]	HSE1; Hpr1; Hpa	HSE1; Hpr1; Hpa
Mus musculus	RefSeq	ILMN_215113	ILMN_259392	LYPD2	NM_026671.1	NM_026671.1		68311	110625682	NM_026671.1	Lypd2	NP_080947.1	ILMN_1248788	000060750	S	372	GCCCTGGCACTTTTCTTGCTCTTGGGTGTCCTGCTGTAAAGCCATGGCCA	15	-	74562752-74562763:74562764-74562801	15qD3	Mus musculus Ly6/Plaur domain containing 2 (Lypd2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			0610005K03Rik; MGC117783; Lypdc2	0610005K03Rik; MGC117783; Lypdc2
Mus musculus	RefSeq	ILMN_188917	ILMN_242440	WDR38	NM_029687.2	NM_029687.2		76646	142371002	NM_029687.2	Wdr38	NP_083963.1	ILMN_1242603	007400079	S	2467	TTGTGGGATTTCTGATTATTGCTTTAGGTCTGGGCACGGTGTCACAGCGC	2	+	38861456-38861505	2qB	Mus musculus WD repeat domain 38 (Wdr38), mRNA.				RP23-244N6.3; 1700123D08Rik	RP23-244N6.3; 1700123D08Rik
Mus musculus	RefSeq	ILMN_201653	ILMN_226679	1190007I07RIK	XM_985039.1	XM_985039.1		544717	94388493	XM_985039.1	1190007I07Rik	XP_990133.1	ILMN_2543507	000460228	S	215	GGAGAACTCAAAACGGAGCTTTTGGGACTGAAAGAGAGACGCCACGAACC	10	-	82082885-82082934	10qC1	PREDICTED: Mus musculus RIKEN cDNA 1190007I07 gene (1190007I07Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_184966	ILMN_244417	WDR66	XM_915421.2	XM_915421.2		269701	94375418	XM_915421.2	Wdr66	XP_920514.1	ILMN_2423071	002470020	S	2711	AGATGATCGACTGTTTCTCGACTCTGTTTGGCCTGACTCCGGAGGGGTGG				5qF	PREDICTED: Mus musculus WD repeat domain 66 (Wdr66), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220192	ILMN_244417	WDR66	XM_915421.2	XM_915421.2		269701	94375418	XM_915421.2	Wdr66	XP_920514.1	ILMN_1220654	001990592	S	1871	CCAAGGAACTCTTCCTGCTCATCTGCAACAGCGGCTACAAAGTGAAGCTC				5qF	PREDICTED: Mus musculus WD repeat domain 66 (Wdr66), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184755	ILMN_184755	ZFP191	NM_021559.2	NM_021559.2		59057	47059077	NM_021559.2	Zfp191	NP_067534.2	ILMN_2421299	000990382	S	772	GAGTCTCATGAAGGCCCCGGCACTCTCAACATAGGTGTTCCCCAGCTTTT	18	-	24173074-24173123	18qA2	Mus musculus zinc finger protein 191 (Zfp191), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KOX17; Znf191; AI480505; AL024422; Znp191; 3526401F17Rik; 5033419P20Rik; ZF-12; AI642085	KOX17; Znf191; AI480505; AL024422; Znp191; 3526401F17Rik; 5033419P20Rik; ZF-12; AI642085
Mus musculus	RefSeq	ILMN_193206	ILMN_193206	UBE2N	NM_080560.3	NM_080560.3		93765	118131101	NM_080560.3	Ube2n	NP_542127.1	ILMN_1227863	004040632	S	3482	GACCTCAGTGGTGTCATGTGGACAGTTGGTTGGCTTTGTTTCCCTGGTGG	10	+	95007923-95007972	10qC2	Mus musculus ubiquitin-conjugating enzyme E2N (Ube2n), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BB101821; AL022654; 1500026J17Rik; UBC13	BB101821; AL022654; 1500026J17Rik; UBC13
Mus musculus	RefSeq	ILMN_193206	ILMN_193206	UBE2N	NM_080560.3	NM_080560.3		93765	118131101	NM_080560.3	Ube2n	NP_542127.1	ILMN_2512541	006480368	S	1356	GATCTGTGTTAGGATTCTACTGAGTGAGTATTTATAAACTGGCTCTGAGC	10	+	95005797-95005846	10qC2	Mus musculus ubiquitin-conjugating enzyme E2N (Ube2n), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BB101821; AL022654; 1500026J17Rik; UBC13	BB101821; AL022654; 1500026J17Rik; UBC13
Mus musculus	Riken	ILMN_207315	ILMN_207315	TRRP4AP-PENDING	ri|4833429F06|PX00638N13|AK076496|1517					AK076496	Trrp4ap-pending		ILMN_2586669	001400092	S	1376	GCACGTGGCTTCCCTGGTGATTTCTGCCACACATTTACAGGAAATCCCAC										
Mus musculus	MEEBO	ILMN_195578	ILMN_195578	AKAP2	scl25397.1_47				6753023	NM_009649	Akap2		ILMN_2516843	003180524	S	5	CATGCTTTTCAGCTGCCCCTCTCCTTTCTCTCGTGGGACTCTTCAGCCTC							Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IPI]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IPI]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IPI]		
Mus musculus	MEEBO	ILMN_189044	ILMN_189044	B230308N11RIK	scl27768.1.1_81						B230308N11Rik		ILMN_2457854	000160575	S	8	CCTGGACTCTGCTTCTGTTTGGCCTTCGTTTTCTCCTTTTACCTTGGGAA										
Mus musculus	Riken	ILMN_201829	ILMN_201829	5730405D16RIK	ri|5730405D16|PX00002I23|AK017490|2277					AK017490	5730405D16Rik		ILMN_1259332	005310154	S	1984	AGCCATCTCTCCAGCTCCCAGGGTTATTTTTCTAAGGGAGTATGGTGTGG										
Mus musculus	RefSeq	ILMN_211038	ILMN_211038	PPP2CA	NM_019411.4	NM_019411.4		19052	146134357	NM_019411.4	Ppp2ca	NP_062284.1	ILMN_2611821	004590746	S	1648	CCCTTCTCAAATCTCAGCCCCGCGTTGTTCTTTGTTACTGTCAGAAAACC				11qB1.3	Mus musculus protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform (Ppp2ca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IDA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence TAS]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence TAS]	R75353	R75353
Mus musculus	RefSeq	ILMN_212996	ILMN_212996	CSNK2A2	NM_009974.2	NM_009974.2		13000	31982441	NM_009974.2	Csnk2a2	NP_034104.1	ILMN_1228485	007320390	S	1761	CAGACTCCACAGACGGGATGGGAGCAGTGTATGGCATGATGGGCAGTTAC	8	-	97971921-97971970	8qD1	Mus musculus casein kinase 2, alpha prime polypeptide (Csnk2a2), mRNA.	Complex that possesses casein kinase activity, found in nearly every subcellular compartment. Protein kinase CK2 complexes are usually tetramers of two alpha and two beta subunits, and can phosphorylate many protein substrates in addition to casein [goid 5956] [evidence TAS]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	1110035J23Rik; C77789; CK2	1110035J23Rik; C77789; CK2
Mus musculus	RefSeq	ILMN_212996	ILMN_212996	CSNK2A2	NM_009974.2	NM_009974.2		13000	31982441	NM_009974.2	Csnk2a2	NP_034104.1	ILMN_2739039	007160477	S	1759	ACAGACTCCACAGACGGGATGGGAGCAGTGTATGGCATGATGGGCAGTTA	8	-	97971923-97971972	8qD1	Mus musculus casein kinase 2, alpha prime polypeptide (Csnk2a2), mRNA.	Complex that possesses casein kinase activity, found in nearly every subcellular compartment. Protein kinase CK2 complexes are usually tetramers of two alpha and two beta subunits, and can phosphorylate many protein substrates in addition to casein [goid 5956] [evidence TAS]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	1110035J23Rik; C77789; CK2	1110035J23Rik; C77789; CK2
Mus musculus	Riken	ILMN_207010	ILMN_207010	7330434K15RIK	ri|7330434K15|PX00650L05|AK078650|4255					AK078650	7330434K15Rik		ILMN_1249857	000940053	S	3869	GCACTCCGTGTTAGGAACGCACATTATTAGGCTGGGCCTGGTAGCACAGG										
Mus musculus	RefSeq	ILMN_216963	ILMN_216963	PSP	NM_008953.2	NM_008953.2		19194	31982095	NM_008953.2	Psp	NP_032979.1	ILMN_1245726	002650338	S	593	TCTGGATGGTGTCTCTACCCTCCTTACAAGTACATTGTCAACCGTCCTGC	2	+	153839441-153839490	2qH1	Mus musculus parotid secretory protein (Psp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a lipid [goid 8289] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221162	ILMN_249384	OLFR874	NM_146882.2	NM_146882.2		258882	115529464	NM_146882.2	Olfr874	NP_667093.2	ILMN_1252965	002470168	S	546	CCTTCTTGAGCTCTCTTGCAATAGCACCTTCATAAATGAGCTCGTAATCT	9	+	37554266-37554315	9qA4	Mus musculus olfactory receptor 874 (Olfr874), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR161-2	MOR161-2
Mus musculus	RefSeq	ILMN_196543	ILMN_227968	FNIP1	NM_173753.3	NM_173753.3		216742	55925633	NM_173753.3	Fnip1	NP_776114.2	ILMN_1240202	001430594	S	4492	GCTCAGGTGGCCACAAACTTCAGTATCGACCATTATAAACCCATATGAGC	11	+	54329964-54330013	11qB1.3	Mus musculus folliculin interacting protein 1 (Fnip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC100017; RP23-297J14.6; KIAA1961; A730024A03Rik; AW557298; AI838773; mKIAA1961	MGC100017; RP23-297J14.6; KIAA1961; A730024A03Rik; AW557298; AI838773; mKIAA1961
Mus musculus	RefSeq	ILMN_196543	ILMN_227968	FNIP1	NM_173753.3	NM_173753.3		216742	55925633	NM_173753.3	Fnip1	NP_776114.2	ILMN_2725155	002480128	S	6054	GCAGATGATCACTAACAGTTTGCATAATGCCTCCATCGGTAGCTGTCCTC	11	+	54331526-54331575	11qB1.3	Mus musculus folliculin interacting protein 1 (Fnip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC100017; RP23-297J14.6; KIAA1961; A730024A03Rik; AW557298; AI838773; mKIAA1961	MGC100017; RP23-297J14.6; KIAA1961; A730024A03Rik; AW557298; AI838773; mKIAA1961
Mus musculus	RefSeq	ILMN_207228	ILMN_227968	FNIP1	NM_173753.3	NM_173753.3		216742	55925633	NM_173753.3	Fnip1	NP_776114.2	ILMN_1248799	002230301	S	1639	GGCGCTATTGGATCTCCTGTACGGTTAGCAAGAACTGTAGTCGTTGGCAA	11	+	54315772-54315821	11qB1.3	Mus musculus folliculin interacting protein 1 (Fnip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC100017; RP23-297J14.6; KIAA1961; A730024A03Rik; AW557298; AI838773; mKIAA1961	MGC100017; RP23-297J14.6; KIAA1961; A730024A03Rik; AW557298; AI838773; mKIAA1961
Mus musculus	RefSeq	ILMN_227968	ILMN_227968	FNIP1	NM_173753.3	NM_173753.3		216742	55925633	NM_173753.3	Fnip1	NP_776114.2	ILMN_2854418	006250220	S	6043	TGGCACGCAGTGCAGATGATCACTAACAGTTTGCATAATGCCTCCATCGG	11	+	54331515-54331564	11qB1.3	Mus musculus folliculin interacting protein 1 (Fnip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC100017; RP23-297J14.6; KIAA1961; A730024A03Rik; AW557298; AI838773; mKIAA1961	MGC100017; RP23-297J14.6; KIAA1961; A730024A03Rik; AW557298; AI838773; mKIAA1961
Mus musculus	RefSeq	ILMN_216015	ILMN_246936	LOC624784	XM_891912.2	XM_891912.2		624784	94387957	XM_891912.2	LOC624784	XP_897005.1	ILMN_2666355	003940398	S	2697	TCATGGGACTATGTAAAGCATGTAGTATTGCCTTGGTATGTAACTATTGT	10	-	41772527-41772576	10qB2	PREDICTED: Mus musculus similar to T:G mismatch-specific thymine-DNA glycosylase TDGb, transcript variant 1 (LOC624784), mRNA.					
Mus musculus	RefSeq	ILMN_215013	ILMN_215013	FUT8	NM_016893.2	NM_016893.2		53618	31560443	NM_016893.2	Fut8	NP_058589.2	ILMN_2815024	000150035	S	2720	GAGAGACCTCTGTGACTTACCGAGAAGATGTGAACAGCTCCCTTCTCTGG	12	+	78394496-78394545	12qC3	Mus musculus fucosyltransferase 8 (Fut8), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The chemical reactions and pathways involving a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43112] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IMP]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence ISA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha(1,6)-linkage [goid 46921] [evidence IMP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: GDP-L-fucose + N4-{N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,3)-[N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,6)]-beta-D-mannosyl-(1,4)-N-acetyl-beta-D-glucosaminyl-(1,4)-N-acetyl-beta-D-glucosaminyl}asparagine = GDP + N4-{N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,3)-[N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,6)]-beta-D-mannosyl-(1,4)-N-acetyl-beta-D-glucosaminyl-(1,4)-[alpha-L-fucosyl-(1,6)]-N-acetyl-beta-D-glucosaminyl}asparagine [goid 8424] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200430	ILMN_200430	LOC384280	XM_357538.1	XM_357538.1			38081889	XM_357538.1	LOC384280		ILMN_1238540	006510131	S	954	GACTAATGTGGACACTGAGGGCGTGGCTCATCCTGTCTGTAATGGCGTCC										
Mus musculus	RefSeq	ILMN_221820	ILMN_221820	GLOD5	NM_027227.2	NM_027227.2		69824	142360348	NM_027227.2	Glod5	NP_081503.1	ILMN_2740873	003310397	S	524	ATCCACAAAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCG	X	-	7581425-7581474	XqA1.1	Mus musculus glyoxalase domain containing 5 (Glod5), mRNA.				AV061890; RP23-198C2.7; 2010001H14Rik	AV061890; RP23-198C2.7; 2010001H14Rik
Mus musculus	MEEBO	ILMN_209537	ILMN_209537	9330175B10RIK	scl0378466.6_0	NM_194351.1			34996514	NM_194351.1	9330175B10Rik		ILMN_2596757	004050438	S	12	AGCTGGCGGTTCTGTGCCTCTGCTGAGAGCCGAGAAAAGTACTCGCGCAA										
Mus musculus	MEEBO	ILMN_209537	ILMN_209537	9330175B10RIK	scl0378466.6_0	NM_194351.1			34996514	NM_194351.1	9330175B10Rik		ILMN_2739854	001240288	S	2360	GAGGACATGAAAGTACTCAGGAAGTGAATCTATGAATATAAAGTGTTTTT										
Mus musculus	MEEBO	ILMN_209537	ILMN_209537	9330175B10RIK	scl0378466.6_0	NM_194351.1			34996514	NM_194351.1	9330175B10Rik		ILMN_2596756	003450487	S	8	TAGGAGCTGGCGGTTCTGTGCCTCTGCTGAGAGCCGAGAAAAGTACTCGC										
Mus musculus	RefSeq	ILMN_218826	ILMN_218826	CSTB	NM_007793.3	NM_007793.3		13014	83921593	NM_007793.3	Cstb	NP_031819.1	ILMN_2700715	003120465	S	405	CTCTCCTACTTCTGATTCGGGGCTCCTTTGCACCTGTGTTTGGGACCACG	10	+	77889637-77889686	10qC1	Mus musculus cystatin B (Cstb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]	 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence ISO]; Interacting selectively with any protease or peptidase [goid 2020] [evidence ISO]	Stfb; AA960480	Stfb; AA960480
Mus musculus	RefSeq	ILMN_222563	ILMN_222563	PDE4A	NM_183408.2	NM_183408.2		18577	118130753	NM_183408.2	Pde4a	NP_899668.1	ILMN_2751548	001940072	S	843	TGCCTGGAGCAGCTGGAGACCATGCAGACCTACCGCTCTGTCAGCGAGAT	9	+	20999240-20999289	9qA3	Mus musculus phosphodiesterase 4A, cAMP specific (Pde4a), transcript variant 5, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence ISS]	Dpde2; D9Ertd60e	Dpde2; D9Ertd60e
Mus musculus	Riken	ILMN_206647	ILMN_206647	PIASG-PENDING	ri|4930568A14|PX00314K01|AK076943|1189					AK076943	Piasg-pending		ILMN_1242783	000610242	S	1031	GCTAGGCAAGCACTCTACCACTGAGCTAAATCCCCAACCCCCAGACCCTG										
Mus musculus	Riken	ILMN_202743	ILMN_202743	E130202I16RIK	ri|E130202I16|PX00092B07|AK021402|1020					AK021402	E130202I16Rik		ILMN_2551939	002630100	S	958	TCACAGTAGGATGGCAGAGTGGCGAGGGGTCCCATTAAAGCCTGTGGTGG										
Mus musculus	RefSeq	ILMN_221528	ILMN_252874	HDAC8	NM_027382.3	NM_027382.3		70315	146141190	NM_027382.3	Hdac8	NP_081658.1	ILMN_2736792	006380070	S	1551	AGAAGAGTGGGGTTGGGTAGGGGGGTCAGCAGATGGGCAGGTTCGGCCCT				XqD	Mus musculus histone deacetylase 8 (Hdac8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]	2610007D20Rik	2610007D20Rik
Mus musculus	RefSeq	ILMN_221616	ILMN_221616	OLFR881	NM_146418.1	NM_146418.1		258413	33239239	NM_146418.1	Olfr881	NP_666530.1	ILMN_2737893	003940541	S	600	GCTGGTGGTTTACATTGTTGTAGGTTTTAATGTAATAGTGCCCACTCTGA	9	+	37800678-37800727	9qA4	Mus musculus olfactory receptor 881 (Olfr881), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR162-7	MOR162-7
Mus musculus	Riken	ILMN_203332	ILMN_203332	CRSP3	ri|4632426C20|PX00013K20|AK028545|3954					AK028545	Crsp3		ILMN_2556495	002680626	S	3792	ATGCTGGGATTAAAGGTGTGTGCCACTACTGCCCGGCTAGCTTTTGCTTT										
Mus musculus	RefSeq	ILMN_208980	ILMN_208980	GUCY1A3	NM_021896.4	NM_021896.4		60596	62990177	NM_021896.4	Gucy1a3	NP_068696.2	ILMN_1228564	004860646	S	2750	AGTGTTGAAGTAATGGGTTCACCTATGGCCTGTGGCCAGCACAAGCTGTG	3	-	81898259-81898308	3qE3	Mus musculus guanylate cyclase 1, soluble, alpha 3 (Gucy1a3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP [goid 30828] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of nitric oxide produced as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction [goid 52565] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction [goid 60087] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA];  [goid 16849] [evidence IEA]	1200016O07Rik	1200016O07Rik
Mus musculus	RefSeq	ILMN_208980	ILMN_208980	GUCY1A3	NM_021896.4	NM_021896.4		60596	62990177	NM_021896.4	Gucy1a3	NP_068696.2	ILMN_1241211	000070008	S	2868	GTTCTGCAAGAACTCCCAGCCTCTCGACTCTACATTCAATTAGATTTCCT	3	-	81898141-81898190	3qE3	Mus musculus guanylate cyclase 1, soluble, alpha 3 (Gucy1a3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP [goid 30828] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of nitric oxide produced as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction [goid 52565] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction [goid 60087] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA];  [goid 16849] [evidence IEA]	1200016O07Rik	1200016O07Rik
Mus musculus	RefSeq	ILMN_208980	ILMN_208980	GUCY1A3	NM_021896.4	NM_021896.4		60596	62990177	NM_021896.4	Gucy1a3	NP_068696.2	ILMN_2591425	003440463	S	4545	CGCACTCACTTGTGTCGCCTGTGTACACACCTGGGGCAAATGGAGGAACT	3	-	81896464-81896513	3qE3	Mus musculus guanylate cyclase 1, soluble, alpha 3 (Gucy1a3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP [goid 30828] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of nitric oxide produced as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction [goid 52565] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction [goid 60087] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA];  [goid 16849] [evidence IEA]	1200016O07Rik	1200016O07Rik
Mus musculus	RefSeq	ILMN_199704	ILMN_257136	LOC676484	XM_990404.2	XM_990404.2		676484	149251045	XM_990404.2	LOC676484	XP_995498.2	ILMN_1249002	002470273	S	1376	CCAGTGGGCAGACAGGCACCCCTGGCCATTATGCACTGACGAAAAGCCCA				3qB	PREDICTED: Mus musculus hypothetical LOC676484 (LOC676484), mRNA.					
Mus musculus	RefSeq	ILMN_223756	ILMN_223756	ACOT1	NM_012006.2	NM_012006.2		26897	118129966	NM_012006.2	Acot1	NP_036136.1	ILMN_3062267	000520630	I	559	CCGTCATGGCTCTGGCTTATTACAACTACGATGACCTCCCCAAGAACATG	12	+	85355422-85355471	12qD1	Mus musculus acyl-CoA thioesterase 1 (Acot1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence TAS]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IDA]	CTE-I; ACH2; Cte1; D12Ucla1; CTE-1	CTE-I; ACH2; Cte1; D12Ucla1; CTE-1
Mus musculus	RefSeq	ILMN_223756	ILMN_223756	ACOT1	NM_012006.2	NM_012006.2		26897	118129966	NM_012006.2	Acot1	NP_036136.1	ILMN_3139875	000450356	A	1434	TGTCAAGTCCTTGACTGGCGCATGCAGGATCCTGGGTTCAATCCAGCTGC	12	+	85358495-85358544	12qD1	Mus musculus acyl-CoA thioesterase 1 (Acot1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence TAS]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IDA]	CTE-I; ACH2; Cte1; D12Ucla1; CTE-1	CTE-I; ACH2; Cte1; D12Ucla1; CTE-1
Mus musculus	MEEBO	ILMN_216484	ILMN_216484	SELK	scl080795.5_227	NM_019979.1			9910275	NM_019979.1	Selk		ILMN_2671601	005050634	S	877	CCTTCTCCAGTGTATATAGTTCTGTTAATTTTGCCTTTTCTCAGCTTTTG								Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185006	ILMN_244075	EXPH5	NM_176846.2	NM_176846.2		320051	31341147	NM_176846.2	Exph5	NP_789816.1	ILMN_1220796	001990093	S	5652	GGCTTTCTTGGAGAACGTCAAACGCTCACTCACACAGGGAAGATTATGGA	9	+	53185314-53185363	9qA5.3	Mus musculus exophilin 5 (Exph5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	slac2-b; Slac2b; E030050P12; B130009M24Rik; Kiaa0624; AC079869.22gm5	slac2-b; Slac2b; E030050P12; B130009M24Rik; Kiaa0624; AC079869.22gm5
Mus musculus	RefSeq	ILMN_209781	ILMN_209781	OASL2	NM_011854.1	NM_011854.1		23962	16924023	NM_011854.1	Oasl2	NP_035984.1	ILMN_2954868	004830010	S	2980	GGCCTTGTGCTCTAGAATGGTACCAATCCAGTATCAATGTATGACAAGTG	5	+	115173160-115173209	5qF	Mus musculus 2'-5' oligoadenylate synthetase-like 2 (Oasl2), mRNA.		Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. Requires binding of double-stranded RNA [goid 1730] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Mmu-OASL; Oasl; M1204	Mmu-OASL; Oasl; M1204
Mus musculus	RefSeq	ILMN_218083	ILMN_218083	BCS1L	NM_025784.2	NM_025784.2		66821	31981187	NM_025784.2	Bcs1l	NP_080060.1	ILMN_2691345	000150647	S	1425	GGGGCTGTTCACAACATTGAATCTCTGAGGTGACCCACCAGGCCATGATC	1	+	74525246-74525278:74525279-74525295	1qC3	Mus musculus BCS1-like (yeast) (Bcs1l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	9130022O19Rik	9130022O19Rik
Mus musculus	RefSeq	ILMN_256955	ILMN_256955	FAM123C	NM_213727.1	NM_213727.1		211383	47523375	NM_213727.1	Fam123c	NP_998892.1	ILMN_2856946	000360392	S	4209	TGAAAGCTCAGTAAGGAACCACTCAACCCGTCACAGCCTTTGGGGCTCGG	1	+	34647676-34647725	1qB	Mus musculus family with sequence similarity 123, member C (Fam123c), mRNA.					
Mus musculus	RefSeq	ILMN_218611	ILMN_256955	FAM123C	NM_213727.1	NM_213727.1		211383	47523375	NM_213727.1	Fam123c	NP_998892.1	ILMN_2698061	007560437	S	4013	ACACAAGTAGTGAGTGCAGGTAGGGGGTTCAGATCCCTTCCAAACCCTAC	1	+	34647480-34647529	1qB	Mus musculus family with sequence similarity 123, member C (Fam123c), mRNA.					
Mus musculus	RefSeq	ILMN_200245	ILMN_200245	LOC386059	XM_359048.1	XM_359048.1			38081067	XM_359048.1	LOC386059		ILMN_1237209	003130114	S	424	GGTGCAGAAGATTCCATAGAGAACATCGACACAACAGTCAAAGAAAATAA										
Mus musculus	RefSeq	ILMN_196336	ILMN_196336	AU044581	NM_177855.2	NM_177855.2			31342833	NM_177855.2	AU044581		ILMN_1220798	005290768	S	3219	CACAGGAAGCAAGCCTGGCAGGAAACTTAGTGCTGAAGGCTTTCGTAGGG										
Mus musculus	RefSeq	ILMN_220560	ILMN_220560	NPFFR2	NM_133192.2	NM_133192.2		104443	31981538	NM_133192.2	Npffr2	NP_573455.2	ILMN_3067357	002750709	I	56	CCCCAACCTCTCTCCAGGTGAACACTGGCAAACTTGTTGAATCTCCTTAG	5	+	90602683-90602732	5qE1	Mus musculus neuropeptide FF receptor 2 (Npffr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [evidence IEA]	HG31; NPFF2; Gpr74	HG31; NPFF2; Gpr74
Mus musculus	RefSeq	ILMN_220560	ILMN_220560	NPFFR2	NM_133192.2	NM_133192.2		104443	31981538	NM_133192.2	Npffr2	NP_573455.2	ILMN_1227800	004890537	S	1253	CCGGTGTCTCAAAACCCAGGTGGGGAAAATTTGGGATGTGGAAAAAGTGC	5	+	90658549-90658598	5qE1	Mus musculus neuropeptide FF receptor 2 (Npffr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [evidence IEA]	HG31; NPFF2; Gpr74	HG31; NPFF2; Gpr74
Mus musculus	RefSeq	ILMN_220560	ILMN_220560	NPFFR2	NM_133192.2	NM_133192.2		104443	31981538	NM_133192.2	Npffr2	NP_573455.2	ILMN_3145557	001510424	A	1239	CTGCTGGTGCAGGAACCGGTGTCTCAAAACCCAGGTGGGGAAAATTTGGG	5	+	90658535-90658584	5qE1	Mus musculus neuropeptide FF receptor 2 (Npffr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [evidence IEA]	HG31; NPFF2; Gpr74	HG31; NPFF2; Gpr74
Mus musculus	RefSeq	ILMN_254449	ILMN_254449	EG433016	NM_001082547.1	NM_001082547.1		433016	127140961	NM_001082547.1	EG433016	NP_001076016.1	ILMN_2995688	004260025	S	68	CACGGGCCAGATCTGCCACACCAGAAATCCAGGAGATTGCTGATAAGGTT	16	+	36184365-36184411:36186450-36186452	16qB3	Mus musculus predicted gene, EG433016 (EG433016), mRNA.					
Mus musculus	RefSeq	ILMN_212552	ILMN_212552	SLC46A3	NM_027872.3	NM_027872.3		71706	141802503	NM_027872.3	Slc46a3	NP_082148.1	ILMN_2627733	005560711	S	1731	GACAGTCGGCAGCAATGCACACGTCCCTATGCAGTGAGCACACATCAGAC	5	-	148690657-148690706	5qG3	Mus musculus solute carrier family 46, member 3 (Slc46a3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1200006F02Rik	1200006F02Rik
Mus musculus	MEEBO	ILMN_187650	ILMN_187650	CDC26	scl24266.6.1_112				21314827	NM_139291	Cdc26		ILMN_2445936	003290114	S	3	CTACCTCCTGAAATCTCTCTATGTGTTCCACAACTCCAGTATGTAGAAGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence ISO]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_221475	ILMN_221475	SLC38A1	NM_134086.3	NM_134086.3		105727	142381438	NM_134086.3	Slc38a1	NP_598847.2	ILMN_2736140	002000632	S	3026	GGGGTGAGTAGAAGCTAACAGAGGAGGCCCAGACACTTAGCTATAGACGC	15	-	96405544-96405593	15qF1	Mus musculus solute carrier family 38, member 1 (Slc38a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of glutamine, 2-amino-4-carbamoylbutanoic acid, into, out of, within or between cells [goid 6868] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of L-glutamine from one side of a membrane to the other. L-glutamine is 2-amino-4-carbamoylbutanoic acid [goid 15186] [evidence IDA]	AU015942; AA409865; AL022800; AA408026; NAT2	AU015942; AA409865; AL022800; AA408026; NAT2
Mus musculus	RefSeq	ILMN_210146	ILMN_230231	PLEC1	NM_201385.1	NM_201385.1		18810	41322924	NM_201385.1	Plec1	NP_958787.1	ILMN_2602697	006760347	S	71	ACGTCTGGCCCACCACCCGACGAACAGGATTTCATCCAGGCCTACGAGGA	15	-	76059807-76059856	15qD3	Mus musculus plectin 1 (Plec1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EBS1; AA591047; AU042537; PLTN; PCN	EBS1; AA591047; AU042537; PLTN; PCN
Mus musculus	Riken	ILMN_203647	ILMN_203647	GPR106, LGR8, GPCR	ri|9430012D19|PX00107J18|AK034592|2386					AK034592	GPR106, LGR8, GPCR		ILMN_2558897	003370369	S	1990	GCTGAGATTTAGTGTGGAACACAAAGACACACTCTCAGGATCTTTGGGTG										
Mus musculus	RefSeq	ILMN_219793	ILMN_219793	BCMO1	NM_021486.2	NM_021486.2		63857	11993945	NM_021486.2	Bcmo1	NP_067461.2	ILMN_2713638	004810333	S	1766	CCAGCTGAAACGCAAGAGGTTGAAAACTCAGATCATCCCACAGATCCGAC	8	+	119657059-119657108	8qE1	Mus musculus beta-carotene 15,15'-monooxygenase (Bcmo1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: beta-carotene + O2 = 2 retinal [goid 3834] [evidence ISS]	beta-CD; Bcdo1; Bcdo; betaCMOOX	beta-CD; Bcdo1; Bcdo; betaCMOOX
Mus musculus	RefSeq	ILMN_221393	ILMN_221393	MRPL37	NM_025500.1	NM_025500.1		56280	22128624	NM_025500.1	Mrpl37	NP_079776.1	ILMN_1254715	001690670	S	1279	CCAGCCGGAGACGTTCAGGAAGTTTTTAGCTCTGTACTTGCATGGTGTTG	4	-	106728625-106728631:106728632-106728674	4qC7	Mus musculus mitochondrial ribosomal protein L37 (Mrpl37), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence ISS]			Rpml2; 2300004O14Rik; AI132596; MRP-L2	Rpml2; 2300004O14Rik; AI132596; MRP-L2
Mus musculus	RefSeq	ILMN_221393	ILMN_221393	MRPL37	NM_025500.1	NM_025500.1		56280	22128624	NM_025500.1	Mrpl37	NP_079776.1	ILMN_2751709	001710014	S	959	CGGCCACAACGCTTTCTTCCAGAACAACTAAGGGCTAAGATGCTCCTGTT	4	-	106733119-106733168	4qC7	Mus musculus mitochondrial ribosomal protein L37 (Mrpl37), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence ISS]			Rpml2; 2300004O14Rik; AI132596; MRP-L2	Rpml2; 2300004O14Rik; AI132596; MRP-L2
Mus musculus	RefSeq	ILMN_216790	ILMN_246505	GOT1L1	NM_029674.1	NM_029674.1		76615	58037452	NM_029674.1	Got1l1	NP_083950.1	ILMN_1246289	007510379	S	1171	CTACTTGCCCAAAACTAGCCGGATCAACTTCACCTGCATCAATGCCAGGA	8	-	28308066-28308115	8qA2	Mus musculus glutamic-oxaloacetic transaminase 1-like 1 (Got1l1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate [goid 4069] [evidence IEA]	1700083M11Rik	1700083M11Rik
Mus musculus	RefSeq	ILMN_220502	ILMN_220502	CDKN2AIP	NM_172407.2	NM_172407.2		70925	141801839	NM_172407.2	Cdkn2aip	NP_765995.1	ILMN_2722913	004290154	S	3179	CATTGGATACCAGAGCAAAATCTATATTCTGTAAATGGTCTGACTGCCCT	8	-	48794931-48794980	8qB1.1	Mus musculus CDKN2A interacting protein (Cdkn2aip), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	4921511I16Rik; AW208986; CARF	4921511I16Rik; AW208986; CARF
Mus musculus	RefSeq	ILMN_215769	ILMN_312211	LOC100043918	XM_001481237.1	XM_001481237.1		100043918	149275221	XM_001481237.1	LOC100043918	XP_001481287.1	ILMN_2663403	001740196	S	224	CTGGGAACATCGTGAAAGCCTTCCGCTACCTTCTTAATGAAGATGGCTGC	Un|NT_166434.1	+	44462-44511		PREDICTED: Mus musculus similar to EBI-1 ligand chemokine (LOC100043918), mRNA.					
Mus musculus	RefSeq	ILMN_200188	ILMN_200188	LOC385891	XM_358987.1	XM_358987.1			38080852	XM_358987.1	LOC385891		ILMN_1243072	007610601	S	1224	CAGAAGATGGAAAGATCTCCCATACTCATGGATAGGCAGGATCGCTCTAG										
Mus musculus	RefSeq	ILMN_217234	ILMN_225853	WNK2	NM_029361.2	NM_029361.2		75607	142383423	NM_029361.2	Wnk2	NP_083637.1	ILMN_1214402	006400370	S	6519	CACTCCTCTAGTCCATTCACGATGTTTTGTAACCACTTTCTAACCATTTT	13	-	49131733-49131782	13qA5	Mus musculus WNK lysine deficient protein kinase 2 (Wnk2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	ESTM15; AW122246; 1810073P09Rik; X83337; mKIAA1760	ESTM15; AW122246; 1810073P09Rik; X83337; mKIAA1760
Mus musculus	RefSeq	ILMN_222592	ILMN_222592	CACNA2D1	NM_009784.1	NM_009784.1		12293	6753233	NM_009784.1	Cacna2d1	NP_033914.1	ILMN_2752030	004850156	S	3786	AGGCTCCCCCACGCAGGCCTTATGAAAAGAAGCGGTCTTGACTTTGACCT	5	+	15876797-15876846	5qA2	Mus musculus calcium channel, voltage-dependent, alpha2/delta subunit 1 (Cacna2d1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC141430; Cchl2a; Cacna2	MGC141430; Cchl2a; Cacna2
Mus musculus	RefSeq	ILMN_209265	ILMN_209265	SDHC	NM_025321.2	NM_025321.2		66052	141803581	NM_025321.2	Sdhc	NP_079597.1	ILMN_1256125	003290630	S	1116	TAATCTAAATTCTTGTACCATCTTCTTTGGAAACGATTAAAGTACTACTC	1	-	173059300-173059349	1qH3	Mus musculus succinate dehydrogenase complex, subunit C, integral membrane protein (Sdhc), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor. No reaction with quinols [goid 104] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AU019277; AI316496; MGC103103; 0610010E03Rik	AU019277; AI316496; MGC103103; 0610010E03Rik
Mus musculus	RefSeq	ILMN_209265	ILMN_209265	SDHC	NM_025321.2	NM_025321.2		66052	141803581	NM_025321.2	Sdhc	NP_079597.1	ILMN_2594149	005670100	S	952	TGTCCTGCTCAGCTAGAGGGAGATAAAGAGCAGCCTGGGAGCTTGGAGCT	1	-	173059464-173059513	1qH3	Mus musculus succinate dehydrogenase complex, subunit C, integral membrane protein (Sdhc), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor. No reaction with quinols [goid 104] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AU019277; AI316496; MGC103103; 0610010E03Rik	AU019277; AI316496; MGC103103; 0610010E03Rik
Mus musculus	RefSeq	ILMN_260898	ILMN_260898	V1RE4	NM_134193.1	NM_134193.1		171227	21717700	NM_134193.1	V1re4	NP_598954.1	ILMN_2912092	000670326	S	791	GTACTCATACTTATCCAAGAAGATCCCCTGAAAACAGAGCCACACAGACC	17	-	21050460-21050509	17qA3.2	Mus musculus vomeronasal 1 receptor, E4 (V1re4), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198303	ILMN_198303	GM725	XM_205592.2	XM_205592.2		277899	38083737	XM_205592.2	Gm725	XP_205592.2	ILMN_2531205	007160014	S	787	CAGTTCTTCGTGGTGAAGGAAATCATGGCAGCATATCCCGCCGGCCACTC	6	+	13214481-13214530	6qA1	PREDICTED: Mus musculus gene model 725, (NCBI) (Gm725), mRNA.					
Mus musculus	Riken	ILMN_202146	ILMN_202146	PMM1	ri|2900079F10|ZX00069L23|AK013805|605					AK013805	Pmm1		ILMN_1223710	004230743	S	1	GAGCGACAGCGCTTGGCGCGCGGAGCTACAGCCATGGCAGTCGCCGTCGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose [goid 19307] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-mannose 1-phosphate = D-mannose 6-phosphate [goid 4615] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208801	ILMN_208801	BMP7	NM_007557.2	NM_007557.2		12162	31982486	NM_007557.2	Bmp7	NP_031583.2	ILMN_2589662	002260059	S	1696	AGCTGATGAGCGCCCTTTCCTTCTGGCACGTGACGGACAAGATCCTACCA	2	-	172695409-172695458	2qH3	Mus musculus bone morphogenetic protein 7 (Bmp7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50768] [evidence IDA]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized during embryonic development. Morphogenesis pertains to the creation of form [goid 48596] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IDA]; The process by which the anatomical structures of a tube are generated and organized. Morphogenesis pertains to the creation of form. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system [goid 35239] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence TAS]	OP1	OP1
Mus musculus	RefSeq	ILMN_196783	ILMN_196783	IFNA14	NM_206975.1	NM_206975.1		404549	46195447	NM_206975.1	Ifna14	NP_996858.1	ILMN_1226397	001260681	S	300	GGATGCAACCCTCCTAGACTCCTTCTGCAATGACCTCAACACTCAGCTCA	4	-	88217353-88217402	4qC4	Mus musculus interferon, alpha 14 (Ifna14), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	RP23-67C1.2; OTTMUSG00000007662; MGC155959	RP23-67C1.2; OTTMUSG00000007662; MGC155959
Mus musculus	RefSeq	ILMN_196783	ILMN_196783	IFNA14	NM_206975.1	NM_206975.1		404549	46195447	NM_206975.1	Ifna14	NP_996858.1	ILMN_2687005	003460546	S	506	CAGAAATCTGGAGAGCCCTGTCTTCCTCAGCCAAGTTGCTGACCAGCCTG	4	-	88217147-88217196	4qC4	Mus musculus interferon, alpha 14 (Ifna14), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	RP23-67C1.2; OTTMUSG00000007662; MGC155959	RP23-67C1.2; OTTMUSG00000007662; MGC155959
Mus musculus	RefSeq	ILMN_215601	ILMN_215601	SUPT5H	NM_013676.1	NM_013676.1		20924	22094122	NM_013676.1	Supt5h	NP_038704.1	ILMN_2661458	007400546	S	3052	CTCCGTGTACCTGAAGGACAGTGAGAAGGTGGTCAGCATCTCCAGTGAAC	7	-	29102782-29102831	7qA3	Mus musculus suppressor of Ty 5 homolog (S. cerevisiae) (Supt5h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]	AU019549; AL033321; AL033283	AU019549; AL033321; AL033283
Mus musculus	RefSeq	ILMN_215601	ILMN_215601	SUPT5H	NM_013676.1	NM_013676.1		20924	22094122	NM_013676.1	Supt5h	NP_038704.1	ILMN_2950441	005550450	S	3238	CAAGATTCTAAACCTCCGCTTCCTAGGGAAGCTCCTGGAAGCCTGACGCC	7	-	29102466-29102515	7qA3	Mus musculus suppressor of Ty 5 homolog (S. cerevisiae) (Supt5h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]	AU019549; AL033321; AL033283	AU019549; AL033321; AL033283
Mus musculus	RefSeq	ILMN_199045	ILMN_313113	EG237412	XR_035281.1	XR_035281.1		237412	149260963	XR_035281.1	EG237412		ILMN_1254729	005560019	S	1516	CATCTTCATAAGCACGAAAGAAGTCATACCGGGGAGAAACCTTATGGGCG	10	+	81841647-81841696	10qC1	PREDICTED: Mus musculus predicted gene, EG237412 (EG237412), misc RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_203836	ILMN_203836	SEMA4G	ri|A330030L04|PX00130F05|AK039355|1372					AK039355	Sema4g		ILMN_2560329	000060162	S	1250	GTATTATGGAAGAAGGCTGCTGAGGGAAGGAGGGAGTGGGTGGCTAGGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]			
Mus musculus	RefSeq	ILMN_215638	ILMN_230382	QRSL1	NM_001081054.2	NM_001081054.2		76563	148540040	NM_001081054.2	Qrsl1	NP_001074523.1	ILMN_1214450	003370440	S	1788	GCCCCTTAGAAGTGCTGTTCTCTGAGTGTCGGTGATCTCATTCAGCCCTG				10qB2	Mus musculus glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 (Qrsl1), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]	2700038P16Rik; C80053; GatA	2700038P16Rik; C80053; GatA
Mus musculus	Riken	ILMN_206111	ILMN_206111	TLL	ri|B430208O18|PX00071G24|AK080919|2909					AK080919	Tll		ILMN_2577634	003120246	S	2219	AGTCACATGGACTGACTGTAAACACACCCATCAGCCTCAGGGTAACACTG										
Mus musculus	RefSeq	ILMN_229795	ILMN_229795	WWC1	NM_170779.1	NM_170779.1		211652	82524277	NM_170779.1	Wwc1	NP_740749.1	ILMN_2898637	006580008	S	2824	TCTACGCTGTCCAAGAAGCCACCTTTTGTGCGAAACTCCCTGGAGCGGCG	11	-	35657675-35657724	11qA4	Mus musculus WW, C2 and coiled-coil domain containing 1 (Wwc1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC037006; MGC47054; AU017197; KIAA0869; AA408228; Kibra; mKIAA0869; RP23-196B5.5	BC037006; MGC47054; AU017197; KIAA0869; AA408228; Kibra; mKIAA0869; RP23-196B5.5
Mus musculus	RefSeq	ILMN_196691	ILMN_229795	WWC1	NM_170779.1	NM_170779.1		211652	82524277	NM_170779.1	Wwc1	NP_740749.1	ILMN_2525423	000130338	S	3202	CTTCGAGGCCAGAGCTGTAAGGAGCCCCCAGAAGTGCAGTCTTTCAGGGA	11	-	35652743-35652746:35653812-35653857	11qA4	Mus musculus WW, C2 and coiled-coil domain containing 1 (Wwc1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC037006; MGC47054; AU017197; KIAA0869; AA408228; Kibra; mKIAA0869; RP23-196B5.5	BC037006; MGC47054; AU017197; KIAA0869; AA408228; Kibra; mKIAA0869; RP23-196B5.5
Mus musculus	RefSeq	ILMN_219035	ILMN_219035	RALYL	NM_178631.3	NM_178631.3		76897	142362122	NM_178631.3	Ralyl	NP_848746.1	ILMN_1236932	007040367	S	2836	CTTGGCTATTGTCTTGTGCAGTGGAAATGGGAGAGACCATCCCCACAGGC	3	+	14181875-14181924	3qA1	Mus musculus RALY RNA binding protein-like (Ralyl), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	0710005M24Rik	0710005M24Rik
Mus musculus	RefSeq	ILMN_215552	ILMN_215552	RBM3	NM_016809.2	NM_016809.2		19652	37497111	NM_016809.2	Rbm3	NP_058089.2	ILMN_1253012	000630403	S	1468	TCAGCTACAGTCCTCACCCCTTCACCCTTTGAGGCTATTCTACATGGGCC	X	-	7297211-7297260	XqA1.1	Mus musculus RNA binding motif protein 3 (Rbm3), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IDA]; Cleavage of stem-loop RNA precursors into microRNAs (miRNAs), a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein [goid 35196] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any part of the larger ribosomal subunit [goid 43023] [evidence IPI]	2600016C11Rik; MGC118410	2600016C11Rik; MGC118410
Mus musculus	RefSeq	ILMN_215552	ILMN_215552	RBM3	NM_016809.2	NM_016809.2		19652	37497111	NM_016809.2	Rbm3	NP_058089.2	ILMN_2985568	002490307	S	1330	GCGACACACTTAGGCCACATTTTGCATTGAAAGGCATACAGGATATGTGC	X	-	7297349-7297398	XqA1.1	Mus musculus RNA binding motif protein 3 (Rbm3), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IDA]; Cleavage of stem-loop RNA precursors into microRNAs (miRNAs), a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein [goid 35196] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any part of the larger ribosomal subunit [goid 43023] [evidence IPI]	2600016C11Rik; MGC118410	2600016C11Rik; MGC118410
Mus musculus	MEEBO	ILMN_224159	ILMN_224159	OLFR190	scl0258392.1_87				27544954	NM_146397	Olfr190		ILMN_2775780	007150201	S	609	AATTCAAGTCCTCACCGTTGTGATTGTTCTTGTGTCCTATACACTAGTGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_197342	ILMN_318318	TOX2	NM_001098799.1	NM_001098799.1		269389	149408147	NM_001098799.1	Tox2	NP_001092269.1	ILMN_1225303	004060739	S	1361	GATGAGCCCCTCACCTCCAGGGCCACAGGACTTCCCACACATCTCTGATT				2qH3	Mus musculus TOX high mobility group box family member 2 (Tox2), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	BI987407; RxHMG1; Gcx1	BI987407; RxHMG1; Gcx1
Mus musculus	RefSeq	ILMN_199087	ILMN_243047	LOC666621	XR_001904.1	XR_001904.1		666621	94396997	XR_001904.1	LOC666621		ILMN_1235435	001580433	S	850	GGCCGCCTTTTGTGCCATTTCTAAGACCAGCAGCTACCTGACCCCCACAC	14	-	42901579-42901628	14qC1	PREDICTED: Mus musculus similar to 40S ribosomal protein S2 (LOC666621), mRNA.					
Mus musculus	Riken	ILMN_204905	ILMN_204905	RBPMS	ri|A530083O20|PX00143M17|AK041118|2159					AK041118	Rbpms		ILMN_2568516	004260202	S	1695	GGACATCACATCTCTCTCAAGTGATTCAGCAAAGCATTGGCCTACCTGAG								Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219352	ILMN_219352	BPGM	NM_007563.4	NM_007563.4		12183	145966683	NM_007563.4	Bpgm	NP_031589.1	ILMN_2707588	000770424	S	1902	TTAGGCTGTTGCCTCCCTGAAAGCAAGTCCTCGATATTCCAGTGACAGTC				6qB1	Mus musculus 2,3-bisphosphoglycerate mutase (Bpgm), mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IEA]; Catalysis of the reaction: 2,3-diphosphoglycerate + H2O = 3-phosphoglycerate + phosphate [goid 4083] [evidence IEA]; Catalysis of the reaction: 2-phospho-D-glycerate = 3-phospho-D-glycerate [goid 4619] [evidence IEA]; Catalysis of the reaction: 3-phospho-D-glyceroyl phosphate = 2,3-bisphospho-D-glycerate [goid 4082] [evidence IEA]	C86192; AL022789; AI323730	C86192; AL022789; AI323730
Mus musculus	RefSeq	ILMN_218993	ILMN_218993	INSM1	NM_016889.2	NM_016889.2		53626	70778862	NM_016889.2	Insm1	NP_058585.2	ILMN_2859558	003290593	S	2605	CTCTGAGCTTTCCCCCTGCCACTTTTGACATTTCACTGTGCATTTTAGGA	2	+	146050451-146050500	2qG1	Mus musculus insulinoma-associated 1 (Insm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	IA-1	IA-1
Mus musculus	RefSeq	ILMN_220220	ILMN_220220	DUB1A	NM_201409.2	NM_201409.2		381944	115299770	NM_201409.2	Dub1a	NP_958811.2	ILMN_1224991	002070600	S	1086	AATACATGAGGTTCTTGATGCCAAATACCAGCTGAAGAAATCAGGGGAAA	7	-	111989097-111989146	7qE3	Mus musculus deubiquitinating enzyme 1a (Dub1a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	DUB-1A	DUB-1A
Mus musculus	RefSeq	ILMN_200095	ILMN_200095	LOC381659	XM_358636.1	XM_358636.1			38080337	XM_358636.1	LOC381659		ILMN_2537572	007320491	S	820	GGTTTTATGAGCTATGTCAAGGACACCAACGCTGCAGGATCTGCGGACGC										
Mus musculus	RefSeq	ILMN_212984	ILMN_212984	KLRA5	NM_008463.2	NM_008463.2		16636	118130769	NM_008463.2	Klra5	NP_032489.1	ILMN_2632289	002900370	S	813	TTGTATATTTTTATCTAAAACAAGACTAGAAGATACTAACTGTAATAATT	6	-	129849376-129849425	6qF3	Mus musculus killer cell lectin-like receptor, subfamily A, member 5 (Klra5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ly49e	Ly49e
Mus musculus	MEEBO	ILMN_219956	ILMN_219956	OLFR1356	scl37764.1.11_11				22129674	NM_146308	Olfr1356		ILMN_2715704	005960307	S	786	GCAGCCACATCATCTTCTAGAATGAGTCTAGTTGCCTCACTGATGTACAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	Riken	ILMN_205647	ILMN_205647	CUGBP2	ri|A130018N14|PX00121G06|AK037436|2076					AK037436	Cugbp2		ILMN_1253235	000070300	S	1761	TGGGAAGAGAACTCCCAATCTGTCCCAAGGGCTGCCAACACTGGTTTGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213674	ILMN_213674	KCTD19	NM_177791.2	NM_177791.2		279499	31343012	NM_177791.2	Kctd19	NP_808459.1	ILMN_2639552	000730228	S	2908	GGTCCCACAGACGACCAACACAGACCAGTTGCCCAAGGCTCATTTTCTGT	8	-	107906782-107906831	8qD3	Mus musculus potassium channel tetramerisation domain containing 19 (Kctd19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	4922504H04Rik; MGC107186	4922504H04Rik; MGC107186
Mus musculus	RefSeq	ILMN_209932	ILMN_209932	MAGED2	NM_030700.1	NM_030700.1		80884	13507637	NM_030700.1	Maged2	NP_109625.1	ILMN_2600565	000360437	S	1879	GGCCAGTACCAACAGCAGCTCTGGTGCCTGTGGTTTCTCCTACAAGTGAG	X	-	147241258-147241259:147241260-147241307	XqF3	Mus musculus melanoma antigen, family D, 2 (Maged2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mage-d2; 4833439A22Rik; ORF1	Mage-d2; 4833439A22Rik; ORF1
Mus musculus	RefSeq	ILMN_230984	ILMN_230984	DISC1	NM_174853.2	NM_174853.2		244667	119874422	NM_174853.2	Disc1	NP_777278.2	ILMN_3118664	000650154	A	1793	GGAAGCCAAGATGCTGGCCCTATCAGAAACACGCATGAAGGCAAACACTG	8	+	127678985-127679010:127741997-127742020	8qE2	Mus musculus disrupted in schizophrenia 1 (Disc1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_208635	ILMN_208635	SFRS8	NM_172276.3	NM_172276.3		231769	110624779	NM_172276.3	Sfrs8	NP_758480.2	ILMN_2671855	002350037	S	141	ACGCTGTCATGTACGGTGCCGGCGGGGGCCGTGCCAAGCCGGAGAGGAAA	5	+	130007246-130007253:130007254-130007295	5qG1.3	Mus musculus splicing factor, arginine/serine-rich 8 (Sfrs8), mRNA.				1190005N23Rik; AI197402; SWAP; 6330437E22Rik	1190005N23Rik; AI197402; SWAP; 6330437E22Rik
Mus musculus	RefSeq	ILMN_211006	ILMN_211006	MED21	NM_025315.3	NM_025315.3		108098	146135037	NM_025315.3	Med21	NP_079591.1	ILMN_2611510	001010142	S	393	GCACTTGCTGACATTGCACAGTCACAGCTGAAGACCAGAAGTGTTACCCA				6qG3	Mus musculus mediator complex subunit 21 (Med21), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]	D19234; D6Ertd782e; 0610007L03Rik; AI449604; Surb7; Srb7	D19234; D6Ertd782e; 0610007L03Rik; AI449604; Surb7; Srb7
Mus musculus	RefSeq	ILMN_212958	ILMN_210707	DNAHC11	NM_010060.2	NM_010060.2		13411	153791277	NM_010060.2	Dnahc11	NP_034190.2	ILMN_2632034	004220139	S	13565	CAGGGCACTCGTAGGCATGCTTAATTTCTTGTCTGTCCACGGGCACGGCT				12qF2	Mus musculus dynein, axonemal, heavy chain 11 (Dnahc11), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence IDA]	Cell motility due to movement of cilia or flagella [goid 1539] [evidence IDA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]	lrd; iv	lrd; iv
Mus musculus	RefSeq	ILMN_212556	ILMN_212556	A030009H04RIK	NM_020591.1	NM_020591.1		80515	10181135	NM_020591.1	A030009H04Rik	NP_065616.1	ILMN_2627765	001090053	S	1595	GAGTATAAATTTCAAGTGACTATCTCCAGAGCCGATAGCAGTGTTAATGT	11	+	69156013-69156062	11qB3	Mus musculus RIKEN cDNA A030009H04 gene (A030009H04Rik), mRNA.				MNCb-2875; AA589459; 2310043C11Rik; AB041807	MNCb-2875; AA589459; 2310043C11Rik; AB041807
Mus musculus	RefSeq	ILMN_214854	ILMN_214854	SYNGR1	NM_207708.1	NM_207708.1		20972	46877047	NM_207708.1	Syngr1	NP_997591.1	ILMN_2657751	007210114	S	3642	CCATCTGTCCGTAATGATTCTTGATTTTCAAAGACTTGGGGTCCCAGGCT	15	+	79949383-79949432	15qE1	Mus musculus synaptogyrin 1 (Syngr1), transcript variant 1a, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISO]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISO]		p29; R75468; Syngr1b	p29; R75468; Syngr1b
Mus musculus	RefSeq	ILMN_214854	ILMN_214854	SYNGR1	NM_207708.1	NM_207708.1		20972	46877047	NM_207708.1	Syngr1	NP_997591.1	ILMN_2652711	000730315	S	3767	CTGAAGGTTATGAGCAGGAGTCCCCAGAGTTTATGGAGGATGAACTGGGC	15	+	79949508-79949557	15qE1	Mus musculus synaptogyrin 1 (Syngr1), transcript variant 1a, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISO]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence ISO]		p29; R75468; Syngr1b	p29; R75468; Syngr1b
Mus musculus	MEEBO	ILMN_186629	ILMN_186629	3010024O21RIK	scl13924.1.1_150						3010024O21Rik		ILMN_2437164	003850719	S	19	CCTAGCCCTAGGCGTGGGGAGATTTGGGGCTGTTTCTGAGAGTTAAATTC										
Mus musculus	RefSeq	ILMN_222774	ILMN_222774	OLFR1241	NM_146455.1	NM_146455.1		258447	33239033	NM_146455.1	Olfr1241	NP_666666.1	ILMN_2991761	005260286	S	690	GAGACAGAAAGCCTTATCTACCTGCAGCTCCCACATCATGGTGGTTGTCC	2	-	89322551-89322600	2qE1	Mus musculus olfactory receptor 1241 (Olfr1241), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-14	MOR231-14
Mus musculus	RefSeq	ILMN_243008	ILMN_243008	SLK	NM_009289.1	NM_009289.1		20874	7106426	NM_009289.1	Slk	NP_033315.1	ILMN_2888786	003400014	S	4037	TGAAGGGCAGACGAACTAAGACAGATGCTCGGCCATGTTGGTGACGTAGC	19	+	47695564-47695613	19qD1	Mus musculus STE20-like kinase (yeast) (Slk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	SMAK; 9A2; AV021402; mSLK; Stk2; mKIAA0204; Etk4; AW411554	SMAK; 9A2; AV021402; mSLK; Stk2; mKIAA0204; Etk4; AW411554
Mus musculus	RefSeq	ILMN_220823	ILMN_220823	POLK	NM_012048.2	NM_012048.2		27015	118129937	NM_012048.2	Polk	NP_036178.1	ILMN_1240630	005890300	S	3898	GACAGAGAGATATTTGATGGTCCTTAGAACCGACCTTGTATGGCACAGTC	13	-	97250922-97250971	13qD1	Mus musculus polymerase (DNA directed), kappa (Polk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Dinb1	Dinb1
Mus musculus	RefSeq	ILMN_221962	ILMN_221962	MS4A2	NM_013516.1	NM_013516.1		14126	7305048	NM_013516.1	Ms4a2	NP_038544.1	ILMN_2742703	005310017	S	840	GGATTGTTCTGCAGATGCCACTCTTTTAGTTATGCTGTATCTGATCTTCT	19	-	11691803-11691852	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 2 (Ms4a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex composed of an Fc-epsilon RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without an Fc-episilon RI beta chain and additional signaling components. The complex functions primarily as an activating receptor for IgE [goid 32998] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IDA]	Fcrbeta; Fcer1b; Ms4a1; Fce1b; FcRB	Fcrbeta; Fcer1b; Ms4a1; Fce1b; FcRB
Mus musculus	RefSeq	ILMN_199795	ILMN_199795	LOC383941	XM_357337.1	XM_357337.1			38077436	XM_357337.1	LOC383941		ILMN_2536517	004220010	S	220	AAGCTGCGGCGGCTGGCCAGTACTGATGACTGCTACTCATTAGCCAAGGG										
Mus musculus	RefSeq	ILMN_214737	ILMN_214737	4933406M09RIK	NM_173771.3	NM_173771.3		240755	142362476	NM_173771.3	4933406M09Rik	NP_776132.1	ILMN_2651350	002510731	S	1665	GCAGATCAAAGTCTGGACAAAAGTGGAGGACGAGGAGAGTTGGAGGCTAC	1	+	136287455-136287504	1qE4	Mus musculus RIKEN cDNA 4933406M09 gene (4933406M09Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	Riken	ILMN_206674	ILMN_206674	ITPR1	ri|E330007J22|PX00211C06|AK087694|2975					AK087694	Itpr1		ILMN_1254130	004900328	S	2865	GAGTGATGGCCCACGCCTTTAATCTCAGCCCTCAGTAGACACAGGCAGGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin [goid 5955] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IPI]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system that can be controlled at will [goid 50882] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5220] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with inositol-1,4,5-triphosphate to initiate a change in cell activity [goid 8095] [evidence TAS]; Combining with inositol-1,4,5-triphosphate to initiate a change in cell activity [goid 8095] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197733	ILMN_197733	LOC268782	XM_193784.2	XM_193784.2			38077683	XM_193784.2	LOC268782		ILMN_2529177	001570661	S	582	TAAGCTTCGGGACGAATTTGATATCGTTGGGGATGTCCGAGGCAAAGGCC										
Mus musculus	RefSeq	ILMN_219837	ILMN_257355	EG216185	XM_911906.3	XM_911906.3		216185	149261369	XM_911906.3	EG216185	XP_916999.3	ILMN_1235422	001110270	S	477	TTACGCCCTACCGAGCGCGGCCAACGGAGAAGTGAAGCCCGTAGTGTCCA				10qC1	PREDICTED: Mus musculus predicted gene, EG216185 (EG216185), mRNA.					
Mus musculus	RefSeq	ILMN_188660	ILMN_234381	SAP18	NM_009119.2	NM_009119.2		20220	133892423	NM_009119.2	Sap18	NP_033145.1	ILMN_2768674	006200577	S	3255	ACAAGTGTCAAGAAGAAGAGGATTGCTGAAACTACACGGTTCAGTTCTGG	14	+	58423679-58423728	14qC3	Mus musculus Sin3-associated polypeptide 18 (Sap18), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISA]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence ISA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence ISA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	EMegR4; D11Ertd539e; Sinbp1; C530046K05Rik	EMegR4; D11Ertd539e; Sinbp1; C530046K05Rik
Mus musculus	RefSeq	ILMN_211905	ILMN_211905	SMYD4	NM_177009.3	NM_177009.3		319822	148747496	NM_177009.3	Smyd4	NP_795983.2	ILMN_2620603	003130050	S	2910	GGCTCGATTTCATCTCACTAAACGATGAATCTGTTTCCCTGGAACATTCC				11qB5	Mus musculus SET and MYND domain containing 4 (Smyd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP23-384C18.3; G430029E23Rik	RP23-384C18.3; G430029E23Rik
Mus musculus	RefSeq	ILMN_210707	ILMN_210707	DNAHC11	NM_010060.1	NM_010060.1		13411	6753651	NM_010060.1	Dnahc11	NP_034190.1	ILMN_2967671	004260097	S	13215	CTTGGACTCAAGACCTCACCCTCCCAGCTGTTGTGTGGCTTTCTGGGTTC	12	-	119118949-119118998	12qF2	Mus musculus dynein, axonemal, heavy chain 11 (Dnahc11), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence IDA]	Cell motility due to movement of cilia or flagella [goid 1539] [evidence IDA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IDA]	lrd; iv	lrd; iv
Mus musculus	RefSeq	ILMN_199720	ILMN_199720	LOC383860	XM_130885.4	XM_130885.4			38076538	XM_130885.4	LOC383860		ILMN_2536237	004760717	S	2214	GGTCTGGCAGGCCTGTGACTTTAAGCAGCTGTACATTTACCCAGGATGTG										
Mus musculus	RefSeq	ILMN_211047	ILMN_211047	SURF2	NM_013678.2	NM_013678.2		20931	66793419	NM_013678.2	Surf2	NP_038706.1	ILMN_2611931	002940370	S	471	GAGCCAGCTTCCAGTGACGAGGAAGACGCCTTGAGTGACGACAGCATGAC	2	+	26774521-26774570	2qA3	Mus musculus surfeit gene 2 (Surf2), mRNA.				Surf-2	Surf-2
Mus musculus	RefSeq	ILMN_218176	ILMN_218176	AKAP8L	NM_017476.2	NM_017476.2		54194	70780372	NM_017476.2	Akap8l	NP_059504.2	ILMN_1242769	001450639	S	1997	GTCCATAACCCTTACCCGGCAGGGCTCCCGTGGCCGAGGCTGGAAGTCCA	17	-	32458394-32458436:32458437-32458443	17qB1	Mus musculus A kinase (PRKA) anchor protein 8-like (Akap8l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	HAP95; Nakap95	HAP95; Nakap95
Mus musculus	RefSeq	ILMN_248324	ILMN_248324	CPA2	NM_001024698.1	NM_001024698.1		232680	67010038	NM_001024698.1	Cpa2	NP_001019869.1	ILMN_2968692	006250722	S	846	CCATGGACCCAGTCCCAATTCTGAAGTTGAAGTGAAATCCATAGTGGACT	6	+	30504215-30504264	6qA3.3	Mus musculus carboxypeptidase A2, pancreatic (Cpa2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	MGC107514	MGC107514
Mus musculus	RefSeq	ILMN_215956	ILMN_215956	PRF1	NM_011073.2	NM_011073.2		18646	34808711	NM_011073.2	Prf1	NP_035203.2	ILMN_2960700	005310079	S	1799	GACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTACAGGGTCTC	10	+	60766754-60766803	10qB4	Mus musculus perforin 1 (pore forming protein) (Prf1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Prf-1; Pfp	Prf-1; Pfp
Mus musculus	RefSeq	ILMN_215956	ILMN_215956	PRF1	NM_011073.2	NM_011073.2		18646	34808711	NM_011073.2	Prf1	NP_035203.2	ILMN_1228333	006650170	S	1569	CCATGAGGTGACATGTGAGCTAAACCACGGCAGGGTGAAATTCTCCTACC	10	+	60766524-60766573	10qB4	Mus musculus perforin 1 (pore forming protein) (Prf1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Prf-1; Pfp	Prf-1; Pfp
Mus musculus	RefSeq	ILMN_213362	ILMN_213362	CYP2J6	NM_010008.3	NM_010008.3		13110	141802269	NM_010008.3	Cyp2j6	NP_034138.2	ILMN_2636302	006480411	S	2231	TCACTAACTTCTGTAGATCTAAATCTAAATAGACCTAGAAACCAATAAAG	4	-	96184143-96184192	4qC5	Mus musculus cytochrome P450, family 2, subfamily j, polypeptide 6 (Cyp2j6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_232863	ILMN_232863	SPATC1	NM_028852.1	NM_028852.1		74281	58037362	NM_028852.1	Spatc1	NP_083128.1	ILMN_2889938	005820255	S	1365	CCTGAGCTGGCGGCATCTGAAGGTGGCTGCTACACGGTGGACTTCTTGCA	15	+	76122762-76122811	15qD3	Mus musculus spermatogenesis and centriole associated 1 (Spatc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the microtubule constituent protein gamma-tubulin [goid 43015] [evidence IDA]	1700084J23Rik; speriolin; MGC144830	1700084J23Rik; speriolin; MGC144830
Mus musculus	RefSeq	ILMN_196452	ILMN_232863	SPATC1	NM_028852.1	NM_028852.1		74281	58037362	NM_028852.1	Spatc1	NP_083128.1	ILMN_2594216	006110463	S	1264	TGAGCATCATGAACAAGCTGCAGAGCTTAGGCTACAACGGGCGGGTGCAC	15	+	76122661-76122710	15qD3	Mus musculus spermatogenesis and centriole associated 1 (Spatc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the microtubule constituent protein gamma-tubulin [goid 43015] [evidence IDA]	1700084J23Rik; speriolin; MGC144830	1700084J23Rik; speriolin; MGC144830
Mus musculus	RefSeq	ILMN_216313	ILMN_216313	HMX1	NM_010445.2	NM_010445.2		15371	118129994	NM_010445.2	Hmx1	NP_034575.1	ILMN_2677766	004220300	S	920	CGCTTGCTTACCCGCTTGCCGCCTTCCCTGCCGCCGCCTCGGTGCCCTTC	5	+	35734933-35734982	5qB3	Mus musculus H6 homeo box 1 (Hmx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]		
Mus musculus	RefSeq	ILMN_248807	ILMN_248807	OGDHL	NM_001081130.1	NM_001081130.1		239017	124487482	NM_001081130.1	Ogdhl	NP_001074599.1	ILMN_2924146	001580477	S	202	GGGCCACGGGCCACCAAGCTCCTGGCCACACGGGCTATCCCGGTGTTCAG	14	+	33139014-33139063	14qB	Mus musculus oxoglutarate dehydrogenase-like (Ogdhl), mRNA.					
Mus musculus	RefSeq	ILMN_223985	ILMN_254030	SAA3	NM_011315.3	NM_011315.3		20210	118130197	NM_011315.3	Saa3	NP_035445.1	ILMN_2772632	006400719	S	308	GAGGACTCAAGAGCTGACCAGTTTGCCAATGAGTGGGGCCGGAGTGGCAA	7	-	53967541-53967590	7qB4	Mus musculus serum amyloid A 3 (Saa3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	Saa-3; l7R3; AV098916	Saa-3; l7R3; AV098916
Mus musculus	Riken	ILMN_206578	ILMN_206578	D630009O07RIK	ri|D630009O07|PX00196A24|AK085310|3011					AK085310	D630009O07Rik		ILMN_1256314	001780546	S	2909	GGAGAGGGGGAACCAACTTCTCAAAGGTGTTCTGTGATCTCTGCACGGGC										
Mus musculus	RefSeq	ILMN_218864	ILMN_218864	GPX1	NM_008160.5	NM_008160.5		14775	145275166	NM_008160.5	Gpx1	NP_032186.2	ILMN_1241367	001980301	S	219	AGAAGCGTCTGGGACCTCGTGGACTGGTGGTGCTCGGTTTCCCGTGCAAT	9	+	108241825-108241874	9qF2	Mus musculus glutathione peroxidase 1 (Gpx1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]	A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IGI]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic bacterium, a bacterium living in close physical association with another organism [goid 9609] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels during angiogenesis [goid 43534] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51897] [evidence IMP]; The modification of a protein amino acid by oxidation [goid 18158] [evidence IMP]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IMP]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IMP]; An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism [goid 51702] [evidence IGI]; Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus [goid 2862] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a xenobiotic compound stimulus. Xenobiotic compounds are compounds foreign to living organisms [goid 9410] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51450] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The regrowth of muscle tissue to repair injured or damaged muscle fibers in the postnatal stage [goid 43403] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IMP]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; The progression of an endothelial cell over time, from its formation to the mature structure [goid 1885] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroperoxide stimulus. Hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH [goid 33194] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse [goid 14902] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to a damaged tissue, following an injury [goid 60055] [evidence IMP]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IDA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IMP]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IMP]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IMP]	GSHPx-1; Gpx; CGPx; AI195024; AL033363; GPx-1	GSHPx-1; Gpx; CGPx; AI195024; AL033363; GPx-1
Mus musculus	Riken	ILMN_206088	ILMN_206088	8430404H04RIK	ri|8430404H04|PX00315P21|AK033361|1076					AK033361	8430404H04Rik		ILMN_1237560	002760039	S	793	ATGTATGCCTGTGCGGAGGGGAGAGGGTGACAGTGGGTGAGGGTTAGCAA										
Mus musculus	Riken	ILMN_206592	ILMN_206592	E030003O11RIK	ri|E030003O11|PX00204G10|AK086837|1934					AK086837	E030003O11Rik		ILMN_2581241	003710092	S	1259	CATTCTGGTCCCGGTCACCTCAGACTGCAGGCACTCAACTGTATGCTCTG										
Mus musculus	Riken	ILMN_206260	ILMN_206260	D030010H02RIK	ri|D030010H02|PX00179I06|AK083433|2931					AK083433	D030010H02Rik		ILMN_2578789	005570239	S	2476	CCAGGGGCTACGAGCCGAAGCAGTTCAGAAATGATCTCAAGCATGTGCTG										
Mus musculus	RefSeq	ILMN_201368	ILMN_201368	LOC382556	XM_356567.1	XM_356567.1			38092756	XM_356567.1	LOC382556		ILMN_2542051	006550491	S	1051	AGCAAACCTAGGCTGATCTTCAAAGCCACACTGCCCTTTGCCGGCGGTCC										
Mus musculus	Riken	ILMN_203881	ILMN_203881	IL7	ri|A630052B02|PX00146J07|AK042009|1403					AK042009	Il7		ILMN_1213727	005570138	S	1130	ACTTGGGAGAGAGTTTACACCCAACTGACCATGGATCTCACCACAGGGAC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; Any process that stops or reduces the activity of an enzyme [goid 43086] [evidence IDA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IDA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IGI]; The process by which a lymphoid progenitor cell becomes committed to becoming any type of T cell [goid 2360] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA];  [goid 5126] [evidence IEA]; Interacting selectively with the interleukin-7 receptor [goid 5139] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189319	ILMN_189319	PTCH1	scl43842.1.630_0				6679518	NM_008957	Ptch1		ILMN_2460224	001300301	S	20	ATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGACACAGAGCTGGCAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; Any process that modulates the frequency, rate or extent of smoothened signaling [goid 8589] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence TAS]		
Mus musculus	RefSeq	ILMN_189443	ILMN_189443	V1RI6	NM_134223.1	NM_134223.1		171257	21717762	NM_134223.1	V1ri6	NP_598984.1	ILMN_1237381	004120114	S	848	GCCCCTTTGTCCTGCTAATAAAGGATTTTCATCTGATTAGTTGCTGGCAC	13	+	22371078-22371127	13qA3.1	Mus musculus vomeronasal 1 receptor, I6 (V1ri6), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_252980	ILMN_252980	TRIM72	NM_001079932.1	NM_001079932.1		434246	121247301	NM_001079932.1	Trim72	NP_001073401.1	ILMN_2900484	003460086	S	2247	GGATCCTCCAGTCCCAATGAGTTTGATGGTCTCTTCCAGCCTCTGTGAGC				7qF3	Mus musculus tripartite motif-containing 72 (Trim72), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC067209; MG53	BC067209; MG53
Mus musculus	RefSeq	ILMN_196479	ILMN_235142	LOC627626	XM_001000454.2	XM_001000454.2		627626	149268851	XM_001000454.2	LOC627626	XP_001000454.1	ILMN_1213239	002510553	S	1382	GATGGGAAGTACAACTCAACCCTGCTGGGAATCCCTTTCTTCGCCATGGG	17	+	42514541-42514589:42639231-42639231	17qB3	PREDICTED: Mus musculus similar to CG11212-PA (LOC627626), mRNA.					
Mus musculus	RefSeq	ILMN_217204	ILMN_243748	GLT6D1	NM_001039095.1	NM_001039095.1		71103	84875494	NM_001039095.1	Glt6d1	NP_001034184.1	ILMN_1230629	007160451	S	971	GATTGCTCATCACCCCATAGACACCTTATGACGCACCAGTGCTGTTGGAC	2	-	25649557-25649576:25649577-25649606	2qA3	Mus musculus glycosyltransferase 6 domain containing 1 (Glt6d1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]	4933411C14Rik; MGC130548; RP23-225D24.8	4933411C14Rik; MGC130548; RP23-225D24.8
Mus musculus	RefSeq	ILMN_188987	ILMN_188987	ZFYVE19	NM_028054.1	NM_028054.1		72008	21312533	NM_028054.1	Zfyve19	NP_082330.1	ILMN_2826947	002750288	S	1502	GAAACATAATAAGTCTGAGAGGGGCCAGGTGAGAGGAGGAGTCATGGCCC	2	+	118908307-118908356	2qE5	Mus musculus zinc finger, FYVE domain containing 19 (Zfyve19), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC117612; 1500041L05Rik	MGC117612; 1500041L05Rik
Mus musculus	RefSeq	ILMN_237267	ILMN_237267	A2LD1	NM_145466.1	NM_145466.1		223267	21703923	NM_145466.1	a2ld1	NP_663441.1	ILMN_2925895	002070367	S	556	AAAGGGCTGTGCCCCAGACGCCAACAGGATGGAGGGAACCAGATAGCTTC	14	-	123290525-123290573:123290574-123290574	14qE5	Mus musculus AIG2-like domain 1 (a2ld1), mRNA.				MGC7867	MGC7867
Mus musculus	RefSeq	ILMN_210048	ILMN_210048	PHKG1	NM_011079.2	NM_011079.2		18682	77404187	NM_011079.2	Phkg1	NP_035209.1	ILMN_2769795	007100669	S	1766	TCTGGGAGCTATAAGCCTTCTGGCTTCTCTACTGTGCACCTTTGTTGATG	5	-	130339855-130339904	5qG1.3	Mus musculus phosphorylase kinase gamma 1 (Phkg1), mRNA.	An enzyme complex that catalyzes the phosphorylation of phosphorylase b to form phosphorylase a [goid 5964] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: 4 ATP + 2 phosphorylase b = 4 ADP + phosphorylase a [goid 4689] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Phkg	Phkg
Mus musculus	Riken	ILMN_202769	ILMN_202769	4930500E24RIK	ri|4930500E24|PX00032L12|AK019661|2688					AK019661	4930500E24Rik		ILMN_2552153	001580364	S	2487	AGGTGAGGCCGAGCCCTCCTCCCAGAGCTATGCCATCTATGCAAACTGCT										
Mus musculus	Riken	ILMN_203098	ILMN_203098	IL18	ri|6330444E07|PX00009F12|AK078100|886					AK078100	Il18		ILMN_1240661	002120221	S	102	AAGCCTGCTATAATCCTCAGGCCCCGGGCGCAGCAGTCCAACTGCAGACT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence TAS];  [goid 8625] [evidence TAS]; Any process by which an organism enters and maintains a periodic, readily reversible state of reduced awareness and metabolic activity. Usually accompanied by physical relaxation, the onset of sleep in humans and other mammals is marked by a change in the electrical activity of the brain [goid 30431] [evidence ISS]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence ISS]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence ISS]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence ISS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence ISS]; The chemical reactions and pathways resulting in the formation of interleukin-13 [goid 42231] [evidence TAS]; The chemical reactions and pathways resulting in the formation of interferon-gamma [goid 42095] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192574	ILMN_192574	B230104P22RIK	scl077976.1_221				52138543	NM_001004363	B230104P22Rik		ILMN_2489351	002070327	S	20	GTTTTTAACTTATTTGATTGGTTTGAGAACAGCCTACAGGGAGAGGAAGA										
Mus musculus	Riken	ILMN_206037	ILMN_206037	D030069G17RIK	ri|D030069G17|PX00181H06|AK051094|2242					AK051094	D030069G17Rik		ILMN_1237596	001820102	S	2096	CCAGGCCTAGTGGGGCATGTTTGTAGTCTCAGGCACTTGGTAGGTTGAGT										
Mus musculus	RefSeq	ILMN_213169	ILMN_213169	MSH2	NM_008628.2	NM_008628.2		17685	118130707	NM_008628.2	Msh2	NP_032654.1	ILMN_2634358	000610369	S	2777	CCGAGGTGGTCGCAAAGAACAACAGCTTCGTAAACGAGATCATTTCACGG	17	+	88122774-88122823	17qE4	Mus musculus mutS homolog 2 (E. coli) (Msh2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A heterodimer involved in binding to and correcting insertion/deletion mutations. In human the complex consists of two subunits, MSH2 and MSH3 [goid 32302] [evidence IEA]; A heterodimer involved in the recognition and repair of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MSH2 and MSH6 [goid 32301] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IDA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence ISO]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells [goid 19724] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Pathways for DNA repair which occur after DNA has replicated, e.g. mismatch repair, and which involve translesion synthesis (TLS-type) DNA polymerases [goid 6301] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA recombination [goid 45910] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; The slowing of DNA synthesis in response to DNA damage by the prevention of new origin firing and the stabilization of slow replication fork progession [goid 31573] [evidence IGI]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IDA]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IGI]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, also known as immunoglobulin gene segments, within a single locus following the induction of an immune response [goid 2204] [evidence IGI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IMP]; Interacting selectively with damaged DNA [goid 3684] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IMP]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IMP]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IMP]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence IDA]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence ISO]	AI788990	AI788990
Mus musculus	RefSeq	ILMN_260707	ILMN_260707	LOC245263	NM_001034869.1	NM_001034869.1		245263	85702208	NM_001034869.1	LOC245263	NP_001030041.1	ILMN_2906615	001850092	S	1548	CTGAGGGCAATCGGGAGAGTGGACTCCTTCCCTGGGTTGTATGGACTGCT	10	-	57630420-57630469	10qB4	Mus musculus similar to double homeobox, 4 (LOC245263), mRNA.					
Mus musculus	RefSeq	ILMN_196846	ILMN_196846	LOC240111	XM_140043.1	XM_140043.1			20900400	XM_140043.1	LOC240111		ILMN_1257173	003940280	S	452	GCTGCCCTGGAGAGGGCCCACGGTCTACCCACACCTTCATTGCCTCCGAG										
Mus musculus	RefSeq	ILMN_259745	ILMN_259745	ZFP36L3	NM_001009549.1	NM_001009549.1		333473	57222289	NM_001009549.1	Zfp36l3	NP_001009549.1	ILMN_2786954	005390164	S	1979	TCCAGGAGTTGCCACAGCCTCTACCGGCATATTGGCTCCAGGTGCTGCAA	X	-	51077543-51077592	XqA5	Mus musculus zinc finger protein 36, C3H type-like 3 (Zfp36l3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps: poly(A) tail shortening, deadenylylation-dependent decapping, and decay of the transcript body, and that can regulate mRNA stability [goid 288] [evidence IDA]; Shortening of the poly(A) tail of a nuclear-transcribed mRNA from full length to an oligo(A) length [goid 289] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IDA]	AY661338	AY661338
Mus musculus	MEEBO	ILMN_211904	ILMN_211904	ESRRBL1	scl49050.9.1_23				31560070	NM_028680	Esrrbl1		ILMN_1242148	000610736	S	2198	GTGATGCACACCTATGATGTAGCTCTCCAGGTGAAGCAGGGGACTGAAGT										
Mus musculus	RefSeq	ILMN_222353	ILMN_222353	OLFR791	NM_146930.1	NM_146930.1		258932	22129044	NM_146930.1	Olfr791	NP_667141.1	ILMN_2878106	005260605	S	464	CTCCACCTCTTATCTTGGGCCTCCAACTTGACTTCTGTGACTCCAATGCC	10	+	128963748-128963797	10qD3	Mus musculus olfactory receptor 791 (Olfr791), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR114-1	MOR114-1
Mus musculus	RefSeq	ILMN_187698	ILMN_193536	VAV3	NM_020505.2	NM_020505.2		57257	69724857	NM_020505.2	Vav3	NP_065251.2	ILMN_1227993	006770392	S	4556	GTGTCTTGGGGATGTTTTGTCTGTTCATGCCAGCAAGTGTTGCTATGGAG	3	+	109445881-109445930	3qF3	Mus musculus vav 3 oncogene (Vav3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IGI]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IGI]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IGI]; Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IGI]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IGI]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IMP]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IGI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rac family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 30676] [evidence IGI]	MGC27838; AA986410; A530094I06Rik	MGC27838; AA986410; A530094I06Rik
Mus musculus	RefSeq	ILMN_187698	ILMN_193536	VAV3	NM_020505.2	NM_020505.2		57257	69724857	NM_020505.2	Vav3	NP_065251.2	ILMN_2495475	005310112	S	3697	GCCAGGAATCCCAGAAAGGTAGAGGTGTTTACAGAGACAGATCAAGCACT	3	+	109331283-109331302:109360891-109360920	3qF3	Mus musculus vav 3 oncogene (Vav3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IGI]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IGI]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IGI]; Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IGI]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IGI]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IMP]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IGI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rac family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 30676] [evidence IGI]	MGC27838; AA986410; A530094I06Rik	MGC27838; AA986410; A530094I06Rik
Mus musculus	RefSeq	ILMN_193536	ILMN_193536	VAV3	NM_020505.2	NM_020505.2		57257	69724857	NM_020505.2	Vav3	NP_065251.2	ILMN_1222226	002750414	S	1996	GTGGAGCAAAAGCACATAAAGAATGTTTGGGAAGAGTAGACAATTGTGGC	3	+	109306339-109306388	3qF3	Mus musculus vav 3 oncogene (Vav3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IGI]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IMP]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IGI]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IGI]; Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IGI]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IGI]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IMP]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IGI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rac family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 30676] [evidence IGI]	MGC27838; AA986410; A530094I06Rik	MGC27838; AA986410; A530094I06Rik
Mus musculus	RefSeq	ILMN_219897	ILMN_219897	BC030500	NM_173411.1	NM_173411.1		234290	27734151	NM_173411.1	BC030500	NP_775587.1	ILMN_2714956	000780719	S	863	GTGGTCGCCTCCTTGTTACAGTCTAGAGAGTGATGCCCATATGCTTGAGA	8	+	61392353-61392402	8qB3.1	Mus musculus cDNA sequence BC030500 (BC030500), mRNA.				MGC40983	MGC40983
Mus musculus	RefSeq	ILMN_226965	ILMN_226965	SGK3	NM_133220.2	NM_133220.2		170755	83649758	NM_133220.2	Sgk3	NP_573483.1	ILMN_3035162	000870563	I	133	TCAGGGCTTCACAGGAGTGAATAAGCACTGTGCCAGTGAGCTTTGTTGCC	1	+	9817109-9817158	1qA2	Mus musculus serum/glucocorticoid regulated kinase 3 (Sgk3), transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	A330005P07Rik; 2510015P22Rik; Cisk	A330005P07Rik; 2510015P22Rik; Cisk
Mus musculus	RefSeq	ILMN_226965	ILMN_226965	SGK3	NM_133220.2	NM_133220.2		170755	83649758	NM_133220.2	Sgk3	NP_573483.1	ILMN_3108894	003420564	A	4950	GTGCAGGTAGTGAAGCCACACGCTCCCTAACAGAAGAGACAAACCTAAAC	1	+	9892084-9892133	1qA2	Mus musculus serum/glucocorticoid regulated kinase 3 (Sgk3), transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	A330005P07Rik; 2510015P22Rik; Cisk	A330005P07Rik; 2510015P22Rik; Cisk
Mus musculus	MEEBO	ILMN_223692	ILMN_223692	GM111	scl00227656.2_202	NM_207234.1			46402214	NM_207234.1	Gm111		ILMN_1257760	004760372	S	1260	CTCCTGGACCTCTCCTCTACATGGATCAGCCCTATCTGGTTTCACAGGAC										
Mus musculus	RefSeq	ILMN_215480	ILMN_215480	ABCC10	NM_170680.2	NM_170680.2		224814	102467836	NM_170680.2	Abcc10	NP_733780.1	ILMN_2660048	001230309	S	47	TCCCCGAGCCTTGTCACTCTTGGCTTCCGCCCGGGTGAGGTGTCTATGGA	17	-	46464876-46464881:46464882-46464925	17qC	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 10 (Abcc10), transcript variant mrp7B, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	Mrp7; mFLJ00002	Mrp7; mFLJ00002
Mus musculus	RefSeq	ILMN_191015	ILMN_215480	ABCC10	NM_170680.2	NM_170680.2		224814	102467836	NM_170680.2	Abcc10	NP_733780.1	ILMN_1238608	003710026	S	4640	CCAGGGCTGCTGGTCTATGTTTTCCTCTGTGCTTCTACCTCTTCTCACGT	17	-	46440346-46440395	17qC	Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 10 (Abcc10), transcript variant mrp7B, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	Mrp7; mFLJ00002	Mrp7; mFLJ00002
Mus musculus	Riken	ILMN_204230	ILMN_204230	A730060A01RIK	ri|A730060A01|PX00151M17|AK043145|2774					AK043145	A730060A01Rik		ILMN_2563382	001170333	S	2369	CCCTCTTCTAACCTCCATGGAAATGTGGACATACCCCCACACAGACACAC										
Mus musculus	RefSeq	ILMN_217596	ILMN_217596	TMEM109	NM_134142.1	NM_134142.1		68539	19527377	NM_134142.1	Tmem109	NP_598903.1	ILMN_2685275	003440209	S	1824	TTGATGTGGAATCATGGCTGCAGTGATATGTTTTTATCAGCGCTTGGTGG	19	-	10945206-10945255	19qA	Mus musculus transmembrane protein 109 (Tmem109), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			C77652; 1110006I15Rik; AA958958	C77652; 1110006I15Rik; AA958958
Mus musculus	RefSeq	ILMN_217662	ILMN_217662	CUTC	NM_025530.2	NM_025530.2		66388	142379763	NM_025530.2	Cutc	NP_079806.1	ILMN_2686087	002600278	S	766	ATCCTTGAGGGTTCCGGTGCTACAGAATTCCACTGCTCTGCCCGATCTTC	19	+	43841721-43841770	19qC3	Mus musculus cutC copper transporter homolog (E.coli) (Cutc), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The regulation of the levels, transport, and metabolism of copper ions [goid 55070] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI326282; 2310039I18Rik; CGI-32	AI326282; 2310039I18Rik; CGI-32
Mus musculus	RefSeq	ILMN_223062	ILMN_223062	SOD3	NM_011435.3	NM_011435.3		20657	86439990	NM_011435.3	Sod3	NP_035565.1	ILMN_1241892	002680070	S	1332	CTAGATCCATCCCGAGCCCCTTTGTGTCCCAAGACAATCCCACAAGCCCC	5	+	52760264-52760313	5qC1	Mus musculus superoxide dismutase 3, extracellular (Sod3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]	AI314465; EC-SOD; MGC13799	AI314465; EC-SOD; MGC13799
Mus musculus	MEEBO	ILMN_196139	ILMN_196139	V2R1	scl0022300.1_1926				38093674	XM_125306	V2r1		ILMN_1235458	006040543	S	13	GTAGATAAATAAATAAACACTTTCCTCGTCGACGCGGCCGCGTCGACGTC										
Mus musculus	RefSeq	ILMN_185781	ILMN_185781	V1RC10	NM_134165.1	NM_134165.1		171183	21699043	NM_134165.1	V1rc10	NP_598926.1	ILMN_3097632	004890164	A	420	CCGGATCATCTATACTGGCGCTTATACCAATGTGAGTGAGACCAACCAGC	6	+	66681805-66681854	6qC1	Mus musculus vomeronasal 1 receptor, C10 (V1rc10), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185781	ILMN_185781	V1RC10	NM_134165.1	NM_134165.1		171183	21699043	NM_134165.1	V1rc10	NP_598926.1	ILMN_3024850	006650326	I	235	ACTGCTTACATAAACAGAGTGATGAGAGGCCTCTCTATCTGCATCACCTG	6	+	66681620-66681669	6qC1	Mus musculus vomeronasal 1 receptor, C10 (V1rc10), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186687	ILMN_233398	1110020C03RIK	NM_026789.2	NM_026789.2		68625	141802817	NM_026789.2	1110020C03Rik	NP_081065.1	ILMN_2614983	003130703	S	175	CTTGAATCGGCCCTGAAAGTATCCAAGAAGACGCGCTCACAAGAAGTTCC	4	-	118234407-118234456	4qD2.1	Mus musculus RIKEN cDNA 1110020C03 gene (1110020C03Rik), mRNA.				C130004B06Rik; AV009650	C130004B06Rik; AV009650
Mus musculus	RefSeq	ILMN_215469	ILMN_215469	4930563M21RIK	NM_183111.1	NM_183111.1		75258	34147096	NM_183111.1	4930563M21Rik	NP_898934.1	ILMN_2960493	004730138	S	119	GGCGCGCACGACTAACGTGATCTGTGAGCAGAACAAAATGAAGGCTTCAC	9	-	55826540-55826573:55828605-55828620	9qB	Mus musculus RIKEN cDNA 4930563M21 gene (4930563M21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_215469	ILMN_215469	4930563M21RIK	NM_183111.1	NM_183111.1		75258	34147096	NM_183111.1	4930563M21Rik	NP_898934.1	ILMN_1228566	000620050	S	585	GGCCCGGCCTGTAAAGGCCAGGGTCACAAAAATATTATCGGAAGTGACTG	9	-	55810553-55810602	9qB	Mus musculus RIKEN cDNA 4930563M21 gene (4930563M21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223524	ILMN_223524	TGFA	NM_031199.2	NM_031199.2		21802	118130077	NM_031199.2	Tgfa	NP_112476.1	ILMN_2765162	005290601	S	3425	GAGACCCAGTCTGAAATGAAAGATAGATTCCAGGTGGACATACACAGAAC	6	+	86224804-86224853	6qD1	Mus musculus transforming growth factor alpha (Tgfa), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IDA]	wa1; wa-1	wa1; wa-1
Mus musculus	Riken	ILMN_205143	ILMN_205143	9830133D01RIK	ri|9830133D01|PX00117J06|AK036554|3506					AK036554	9830133D01Rik		ILMN_1237127	004480367	S	3449	CACATGCATGCACACCAACTGTAAAGTTCAGAGTAGCCACCACAGGCCCA										
Mus musculus	Riken	ILMN_205163	ILMN_205163	A630050F23RIK	ri|A630050F23|PX00146M13|AK041981|3843					AK041981	A630050F23Rik		ILMN_1224513	002710048	S	3398	ATTCATGCCCAAGGTGGCCCGAAGGTGGCACTGACTGGAAGGCTGGTCAT										
Mus musculus	RefSeq	ILMN_212651	ILMN_212651	JPH2	NM_021566.1	NM_021566.1		59091	10947009	NM_021566.1	Jph2	NP_067541.1	ILMN_2628876	007330376	S	2356	ACTGAGCAAGGCCGGTGCCAAGAAGAAGGGCCGTAAGGAAGTGGCGCAGG	2	-	163164997-163165046	2qH3	Mus musculus junctophilin 2 (Jph2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Jp2; JP-2; 1110002E14Rik	Jp2; JP-2; 1110002E14Rik
Mus musculus	RefSeq	ILMN_212651	ILMN_212651	JPH2	NM_021566.1	NM_021566.1		59091	10947009	NM_021566.1	Jph2	NP_067541.1	ILMN_2628875	002490431	S	2354	GACTGAGCAAGGCCGGTGCCAAGAAGAAGGGCCGTAAGGAAGTGGCGCAG	2	-	163164999-163165048	2qH3	Mus musculus junctophilin 2 (Jph2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Jp2; JP-2; 1110002E14Rik	Jp2; JP-2; 1110002E14Rik
Mus musculus	MEEBO	ILMN_193645	ILMN_193645	8030475D13RIK	scl12464.1.1_330				46810288	NM_176955	8030475D13Rik		ILMN_2499122	004920170	S	20	CTTTGCATGTCTTCAACTAATGATGTAGGAGATAAACACAGAGTATTAGC										
Mus musculus	MEEBO	ILMN_193645	ILMN_193645	8030475D13RIK	scl12464.1.1_330				46810288	NM_176955	8030475D13Rik		ILMN_2738252	004890242	S	2454	CAGATTTATCTATGATGACAGAGCTCTCCAAACTTCACTGATTTACAGAA										
Mus musculus	RefSeq	ILMN_216072	ILMN_216072	OLFR1276	NM_146395.1	NM_146395.1		258390	33238995	NM_146395.1	Olfr1276	NP_666507.1	ILMN_1231917	003710528	S	595	GTTGCTGCCAACAGTGGCATCATTTCTATTGGCACCTTCTTCTTACTGAT	2	+	111097868-111097917	2qE3	Mus musculus olfactory receptor 1276 (Olfr1276), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR245-10	MOR245-10
Mus musculus	RefSeq	ILMN_199268	ILMN_199268	LOC245253	XM_142875.2	XM_142875.2			38093620	XM_142875.2	LOC245253		ILMN_1249490	000830025	S	43	GAGCTGGAGAGAAGACAACCAGCGATTGGACAGGGGCCATGCAGAGGAAC										
Mus musculus	RefSeq	ILMN_223525	ILMN_223525	BOP1	NM_013481.1	NM_013481.1		12181	7304930	NM_013481.1	Bop1	NP_038509.1	ILMN_1253942	006330333	S	2389	GGCTTAAGCCAGAAGGGAAGGTGGTATTGATACAATGTCACCCACTGAGG	15	-	76283463-76283512	15qD3	Mus musculus block of proliferation 1 (Bop1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IMP]; The formation of the constituents of the large ribosomal subunit, their assembly, and their transport to the sites of protein synthesis [goid 42273] [evidence IMP]	Interacting selectively with any complex of RNA and protein [goid 43021] [evidence IDA]	D18861; AW146150; Erb1p; Kiaa0124; mKIAA0124; AU020183	D18861; AW146150; Erb1p; Kiaa0124; mKIAA0124; AU020183
Mus musculus	RefSeq	ILMN_218917	ILMN_218917	AOF2	NM_133872.1	NM_133872.1		99982	39930514	NM_133872.1	Aof2	NP_598633.1	ILMN_1254253	000630554	S	2710	GATCCAACGGCATGTCATCTGCCACGTAAGCAAGCTCTTCTAGCAATACT	4	-	136106690-136106739	4qD3	Mus musculus amine oxidase (flavin containing) domain 2 (Aof2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones [goid 46886] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	mKIAA0601; 1810043O07Rik; LSD1; D4Ertd478e; AA408884	mKIAA0601; 1810043O07Rik; LSD1; D4Ertd478e; AA408884
Mus musculus	RefSeq	ILMN_200491	ILMN_200491	LOC381741	XM_355723.1	XM_355723.1			38082690	XM_355723.1	LOC381741		ILMN_2538952	004570497	S	355	TCTGCCCCCGACATTGAAGGTGCGTATTCTGCATGAGTCCTGGTCCTGCC										
Mus musculus	RefSeq	ILMN_252403	ILMN_252403	OLFR1359	NM_001011820.1	NM_001011820.1		258067	58801403	NM_001011820.1	Olfr1359	NP_001011820.1	ILMN_2912276	004730386	S	548	CCCTGCTCAAGTTGTCCTGTGTGGATACGACAGCTAATGAAGCAGAGCTG	13	+	21795419-21795468	13qA3.1	Mus musculus olfactory receptor 1359 (Olfr1359), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR256-35; MOR256-60	MOR256-35; MOR256-60
Mus musculus	RefSeq	ILMN_218858	ILMN_258881	TTC25	NM_028918.2	NM_028918.2		74407	124358956	NM_028918.2	Ttc25	NP_083194.2	ILMN_1230909	005820605	S	1881	CGTCAAACCTAGGGATTAGGAGAGAGTCCAGAGAAATCTACAGAAGGCTC	11	+	100432943-100432992	11qD	Mus musculus tetratricopeptide repeat domain 25 (Ttc25), mRNA. XM_919301 XM_987522 XM_987558 XM_987586			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4933404O19Rik; RP24-319D9.1	4933404O19Rik; RP24-319D9.1
Mus musculus	RefSeq	ILMN_201308	ILMN_229563	LOC676720	XM_992394.1	XM_992394.1		676720	94388889	XM_992394.1	LOC676720	XP_997488.1	ILMN_1226701	000160707	S	218	GGCCCAGTATGAGCAGTTGCCTCAGAAGTACCAAGAGGATCTGGGCAGGC					PREDICTED: Mus musculus similar to Keratin, type I cytoskeletal 18 (Cytokeratin-18) (CK-18) (Keratin-18) (K18) (LOC676720), mRNA.					
Mus musculus	RefSeq	ILMN_203018	ILMN_240362	ENTPD4	NM_026174.2	NM_026174.2		67464	142349997	NM_026174.2	Entpd4	NP_080450.1	ILMN_2554110	002470747	S	1661	GTCGATGGAGGTCGGCATGAGAGGCATAGAGTCCTCGGTCAAAGCGTTCC	14	+	69981706-69981710:69982380-69982424	14qD2	Mus musculus ectonucleoside triphosphate diphosphohydrolase 4 (Entpd4), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]	mKIAA0392; AI414893; 1200014F22Rik; Lysal1; A430102M06Rik; 4930513O14Rik	mKIAA0392; AI414893; 1200014F22Rik; Lysal1; A430102M06Rik; 4930513O14Rik
Mus musculus	RefSeq	ILMN_189960	ILMN_240362	ENTPD4	NM_026174.2	NM_026174.2		67464	142349997	NM_026174.2	Entpd4	NP_080450.1	ILMN_2589312	005690463	S	2870	CCACACATTGCTTGACAGTCCTTGTTGTCACGCTGTGGTTGCAGCTGTCG	14	+	69984619-69984668	14qD2	Mus musculus ectonucleoside triphosphate diphosphohydrolase 4 (Entpd4), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]	mKIAA0392; AI414893; 1200014F22Rik; Lysal1; A430102M06Rik; 4930513O14Rik	mKIAA0392; AI414893; 1200014F22Rik; Lysal1; A430102M06Rik; 4930513O14Rik
Mus musculus	RefSeq	ILMN_188069	ILMN_240362	ENTPD4	NM_026174.2	NM_026174.2		67464	142349997	NM_026174.2	Entpd4	NP_080450.1	ILMN_1219873	006220500	S	333	GCTGCAGCCAGGATGCTAATGACAACGATTTGTCGTAAATTGGTGTTCAG	14	+	69967249-69967298	14qD2	Mus musculus ectonucleoside triphosphate diphosphohydrolase 4 (Entpd4), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]	mKIAA0392; AI414893; 1200014F22Rik; Lysal1; A430102M06Rik; 4930513O14Rik	mKIAA0392; AI414893; 1200014F22Rik; Lysal1; A430102M06Rik; 4930513O14Rik
Mus musculus	RefSeq	ILMN_221279	ILMN_221279	BZRAP1	NM_172449.1	NM_172449.1		207777	27369600	NM_172449.1	Bzrap1	NP_766037.1	ILMN_1229256	007610451	S	3355	CCCTTGTCTGGGCGAGTCTCTTTGCATGTTTTCTTCGCTGTGGTGGGAGA	11	+	87599271-87599320	11qC	Mus musculus benzodiazapine receptor associated protein 1 (Bzrap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D230016K05; mKIAA0612	D230016K05; mKIAA0612
Mus musculus	RefSeq	ILMN_213702	ILMN_213702	ADRA1A	NM_013461.3	NM_013461.3		11549	118129926	NM_013461.3	Adra1a	NP_038489.2	ILMN_1232907	000630114	S	2274	CCAAGTTCCAACCATTAAGATCCACACCATCTCCCTCGGTGAAAACGGGG	14	+	67346740-67346789	14qD1	Mus musculus adrenergic receptor, alpha 1a (Adra1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IDA]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IGI]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction as a result of the baroreceptor response to increased blood pressure [goid 1985] [evidence IMP]; A process that results in a decrease in the diameter of an artery during the norepinephrine-epinephrine response to decreased blood pressure [goid 1994] [evidence IMP]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IGI]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence ISO];  [goid 4937] [evidence IMP];  [goid 4937] [evidence IDA]	[a]1a; Adra1c; MGC130524	[a]1a; Adra1c; MGC130524
Mus musculus	RefSeq	ILMN_213702	ILMN_213702	ADRA1A	NM_013461.3	NM_013461.3		11549	118129926	NM_013461.3	Adra1a	NP_038489.2	ILMN_1259043	001740136	S	4085	CTCTCATGGTCTGGACATCTTTCATGTGCTCTCTAAGTCAGCTTTGCTTC	14	+	67352114-67352163	14qD1	Mus musculus adrenergic receptor, alpha 1a (Adra1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IDA]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IGI]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction as a result of the baroreceptor response to increased blood pressure [goid 1985] [evidence IMP]; A process that results in a decrease in the diameter of an artery during the norepinephrine-epinephrine response to decreased blood pressure [goid 1994] [evidence IMP]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IGI]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence ISO];  [goid 4937] [evidence IMP];  [goid 4937] [evidence IDA]	[a]1a; Adra1c; MGC130524	[a]1a; Adra1c; MGC130524
Mus musculus	RefSeq	ILMN_210449	ILMN_210449	UFSP1	NM_027356.2	NM_027356.2		70240	142360157	NM_027356.2	Ufsp1	NP_081632.1	ILMN_2605703	001660731	S	826	ACACAGCCACCTATTTACTTCGCACAGGCCCCCACCGCGATCAAGTTTGG	5	+	137736162-137736211	5qG2	Mus musculus UFM1-specific peptidase 1 (Ufsp1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IDA]	D5Ertd655e; Ufsp1; MGC107633	D5Ertd655e; Ufsp1; MGC107633
Mus musculus	RefSeq	ILMN_196585	ILMN_196585	FV1	NM_010244.3	NM_010244.3		14349	110665704	NM_010244.3	Fv1	NP_034374.2	ILMN_1237595	001340544	S	1227	CCTCTGTATAAAGGACATAACAGTGGGGAGCGTGGCTGCTCAGTTGCATG	4	+	147244314-147244363	4qE2	Mus musculus Friend virus susceptibility 1 (Fv1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]		Rv-1; Fv-1; Rv1	Rv-1; Fv-1; Rv1
Mus musculus	RefSeq	ILMN_196585	ILMN_196585	FV1	NM_010244.3	NM_010244.3		14349	110665704	NM_010244.3	Fv1	NP_034374.2	ILMN_1220594	005220484	S	1230	CTGTATAAAGGACATAACAGTGGGGAGCGTGGCTGCTCAGTTGCATGATC	4	+	147244317-147244366	4qE2	Mus musculus Friend virus susceptibility 1 (Fv1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]		Rv-1; Fv-1; Rv1	Rv-1; Fv-1; Rv1
Mus musculus	RefSeq	ILMN_196585	ILMN_196585	FV1	NM_010244.3	NM_010244.3		14349	110665704	NM_010244.3	Fv1	NP_034374.2	ILMN_2736941	005490224	S	637	TCTAAAGAACGCACCCAGCAGGACAAAGCAGATGCCCCTCAGATCCAGTC	4	+	147243724-147243773	4qE2	Mus musculus Friend virus susceptibility 1 (Fv1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]		Rv-1; Fv-1; Rv1	Rv-1; Fv-1; Rv1
Mus musculus	MEEBO	ILMN_190902	ILMN_190902	A630034I12RIK	scl00329790.1_296						A630034I12Rik		ILMN_1255193	001580639	S	16	TTGAGCCTCGGGGTCAATTCCTCTGTCTCTTGTGTGAGACACATGTCGGC										
Mus musculus	RefSeq	ILMN_190834	ILMN_231929	1700021P22RIK	XM_924743.2	XM_924743.2		75538	94380267	XM_924743.2	1700021P22Rik	XP_929836.1	ILMN_2473666	002470148	S	217	GGGTCTTGGGGATCTTGACAGAGTGAAAGGTCATGAACTAGGGGAGATGA				7qB4	PREDICTED: Mus musculus RIKEN cDNA 1700021P22 gene, transcript variant 18 (1700021P22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222735	ILMN_234935	A830010M20RIK	XM_986204.1	XM_986204.1		231570	94376525	XM_986204.1	A830010M20Rik	XP_991298.1	ILMN_1225007	000840164	S	2179	GAAGCTACTACTGCAGAGCATAATCACAACAAAGGCAATGGTGGATATAA					PREDICTED: Mus musculus RIKEN cDNA A830010M20 gene, transcript variant 2 (A830010M20Rik), mRNA.					
Mus musculus	Riken	ILMN_204295	ILMN_204295	5730478M09RIK	ri|A730051J12|PX00151M14|AK043059|1377					AK043059	5730478M09Rik		ILMN_2563884	001430687	S	1144	CAGGGGAACCTGCTGTGTGCTGGTGTATGAATGATCAGATGCCTTCTAGC										
Mus musculus	RefSeq	ILMN_198435	ILMN_246104	LOC209281	XR_002517.1	XR_002517.1		209281	94406725	XR_002517.1	LOC209281		ILMN_1249305	001110068	S	744	CAAATACCACGTTCAAGGCCTTGCGCTGGCAGCTTCCACTTACCTGCACC				19qC2	PREDICTED: Mus musculus similar to capping protein (actin filament) muscle Z-line, alpha 1 (LOC209281), mRNA.					
Mus musculus	RefSeq	ILMN_213337	ILMN_213337	HOXD1	NM_010467.2	NM_010467.2		15429	112983631	NM_010467.2	Hoxd1	NP_034597.2	ILMN_1257699	006760482	S	1636	CACTGTTTAGTTAGTAGCGGAACAAATCCACAGGGTAGGTAAGGATTAGA	2	+	74602973-74603022	2qC3	Mus musculus homeo box D1 (Hoxd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-4.9	Hox-4.9
Mus musculus	RefSeq	ILMN_215138	ILMN_215138	BUB3	NM_009774.3	NM_009774.3		12237	141802159	NM_009774.3	Bub3	NP_033904.2	ILMN_2655944	001990035	S	1722	TGTCACTGAAGCCCTCCGGACGATAAATGGTGTACCAGCCAGGAGCTACT	7	+	138715079-138715128	7qF3	Mus musculus budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae) (Bub3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IMP]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IMP]		AU019800; AU021329; AU043350; AW146323; C78067	AU019800; AU021329; AU043350; AW146323; C78067
Mus musculus	RefSeq	ILMN_223240	ILMN_223240	OLFR199	NM_207550.1	NM_207550.1		404310	46430551	NM_207550.1	Olfr199	NP_997433.1	ILMN_1224426	002940523	S	828	ATTTTATACAGTCATAATTCCTTTGCTCAACCCATTTGTTTACAGTCTGA	16	-	59215560-59215609	16qC1.3	Mus musculus olfactory receptor 199 (Olfr199), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR182-14; MGC157637	MOR182-14; MGC157637
Mus musculus	RefSeq	ILMN_190521	ILMN_242601	2310002D06RIK	XM_899399.2	XM_899399.2		69522	94392983	XM_899399.2	2310002D06Rik	XP_904492.1	ILMN_2470876	000110300	S	131	GCCTGACCTGTCTTGGATTTTCCGAAGAGTCAACCTACCTGACATCATCC	12	+	81618570-81618619	12qC3	PREDICTED: Mus musculus RIKEN cDNA 2310002D06 gene (2310002D06Rik), mRNA.					
Mus musculus	MEEBO	ILMN_188601	ILMN_188601	IGKV4-73_AJ231216_IG_KAPPA_VARIABLE_4-73_18	IGKV4-73_AJ231216_Ig_kappa_variable_4-73_18						IGKV4-73_AJ231216_Ig_kappa_variable_4-73_18		ILMN_1242258	003850528	S	6	CAGCTTCCTGCTAATCAGTGCCTCAGTCCTAATGTCCAGAGGACAAATTG										
Mus musculus	RefSeq	ILMN_216334	ILMN_253981	LIN7C	NM_011699.3	NM_011699.3		22343	118130071	NM_011699.3	Lin7c	NP_035829.1	ILMN_2669869	000630050	S	4086	CAACCTTTACATAGAGTAAAAACCAAAATCCGTGGTGGTTCCTGACATGA	2	+	109741043-109741092	2qE3	Mus musculus lin-7 homolog C (C. elegans) (Lin7c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	LIN-7C; AI303698; AW125731; D2Ertd520e; 9130007B12Rik; AU019331; MGC54626; MALS-3; Veli3; LIN-7-C	LIN-7C; AI303698; AW125731; D2Ertd520e; 9130007B12Rik; AU019331; MGC54626; MALS-3; Veli3; LIN-7-C
Mus musculus	RefSeq	ILMN_218100	ILMN_229468	ABHD12	NM_024465.2	NM_024465.2		76192	118130714	NM_024465.2	Abhd12	NP_077785.1	ILMN_2774267	007650373	S	801	CCTAGAAAGAGGACTCAGACACAGCGGGCAGAGGCTCCTGATGGACCTGT	2	-	150658670-150658719	2qG3	Mus musculus abhydrolase domain containing 12 (Abhd12), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	AI431047; 6330583M11Rik; AW547313	AI431047; 6330583M11Rik; AW547313
Mus musculus	RefSeq	ILMN_254696	ILMN_254696	EG432743	NM_001013788.1	NM_001013788.1		432743	85701473	NM_001013788.1	EG432743	NP_001013810.1	ILMN_2870913	001430465	S	1840	ATGTACCACAGAGACCCACTGTGACAATGATTCAGTCCACCAGGCTGGCC	13	+	30983468-30983517	13qA3.2	Mus musculus predicted gene, EG432743 (EG432743), mRNA.					
Mus musculus	MEEBO	ILMN_220137	ILMN_220137	LOC238771	scl44532.4.1_220				51767850	XM_484303	LOC238771		ILMN_2718058	003190528	S	1946	GTACTGATCATGAAGCCCCTGGATACACACGTGCCACCATACCCTTCCTG										
Mus musculus	MEEBO	ILMN_221010	ILMN_221010	2210416O15RIK	scl070393.7_27				51828636	XM_488605	2210416O15Rik		ILMN_1229414	003520561	S	1064	TGCTCAACCCGGGTCTCTCTGCTCCCCGGTTCCCCGCTTTGTGTGGACAC										
Mus musculus	RefSeq	ILMN_191159	ILMN_233411	CBLL1	NM_134048.1	NM_134048.1		104836	19527263	NM_134048.1	Cbll1	NP_598809.1	ILMN_2725517	000620468	S	1543	TGACTGTGGAAGGAAAACTACCTCTTTTGAGGTAGCTATTAACACAAGTC	12	-	32172029-32172078	12qA3	Mus musculus Casitas B-lineage lymphoma-like 1 (Cbll1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of endocytosis [goid 45807] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	c-Cbl-like; Hakai; AI467391	c-Cbl-like; Hakai; AI467391
Mus musculus	RefSeq	ILMN_219573	ILMN_219573	NFIC	NM_008688.3	NM_008688.3		18029	84370341	NM_008688.3	Nfic	NP_032714.1	ILMN_3022492	000050528	I	1350	CCGACACGTCCCCTGCAAACAGTCCCTTTGTGGGATTAGGACGGAGGGAT	10	-	80866111-80866122:80866123-80866160	10qC1	Mus musculus nuclear factor I/C (Nfic), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	NF1-C; AA589446; 1500041O16Rik; 1110019L22Rik; AI746521	NF1-C; AA589446; 1500041O16Rik; 1110019L22Rik; AI746521
Mus musculus	RefSeq	ILMN_209022	ILMN_209022	TRDMT1	NM_010067.3	NM_010067.3		13434	141802352	NM_010067.3	Trdmt1	NP_034197.2	ILMN_2591823	005310446	S	288	GGCCTACAGGGGGATATGACCGATCCAAGGACAACTAGCTTCTTGTATAT	2	-	13445070-13445119	2qA1	Mus musculus tRNA aspartic acid methyltransferase 1 (Trdmt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine [goid 16428] [evidence IEA]	Rnmt2; Dnmt2	Rnmt2; Dnmt2
Mus musculus	RefSeq	ILMN_209022	ILMN_209022	TRDMT1	NM_010067.3	NM_010067.3		13434	141802352	NM_010067.3	Trdmt1	NP_034197.2	ILMN_2619348	004200612	S	229	ACAAGCTATCTTTCAATATGATTTTAATGAGCCCTCCATGCCAGCCATTC	2	-	13447249-13447298	2qA1	Mus musculus tRNA aspartic acid methyltransferase 1 (Trdmt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine [goid 16428] [evidence IEA]	Rnmt2; Dnmt2	Rnmt2; Dnmt2
Mus musculus	RefSeq	ILMN_209022	ILMN_209022	TRDMT1	NM_010067.3	NM_010067.3		13434	141802352	NM_010067.3	Trdmt1	NP_034197.2	ILMN_2692141	003450445	S	2447	GGAACCTAAGATGTGATTCCTGGTATGTGGAACACACCCCAGGGTAGGCT	2	-	13431928-13431977	2qA1	Mus musculus tRNA aspartic acid methyltransferase 1 (Trdmt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine [goid 16428] [evidence IEA]	Rnmt2; Dnmt2	Rnmt2; Dnmt2
Mus musculus	MEEBO	ILMN_187316	ILMN_187316	MKIAA1108	scl0003977.1_62				28972621	AK122445	mKIAA1108		ILMN_2443064	005340097	S	20	CGCCTCCTCACCAAACTTCTTTAAGTACCTAAAACACAATTCCAGTGGAG										
Mus musculus	MEEBO	ILMN_187316	ILMN_187316	MKIAA1108	scl0003977.1_62				28972621	AK122445	mKIAA1108		ILMN_2467783	005270026	S	8	GCCAAATTTTCTAAAATTTCTGGCTCCCGTAGATGAAAATAACACCTGTG										
Mus musculus	RefSeq	ILMN_216218	ILMN_216218	2900024C23RIK	NM_026062.3	NM_026062.3		67266	142352628	NM_026062.3	2900024C23Rik	NP_080338.1	ILMN_2668620	002360113	S	2334	TTCTTCCCACTAATCAATTTGTTTGTAATAAATGTCCTGATGATCATGCT	5	-	108337357-108337406	5qF	Mus musculus RIKEN cDNA 2900024C23 gene (2900024C23Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI315274; MGC144843	AI315274; MGC144843
Mus musculus	RefSeq	ILMN_212871	ILMN_212871	VPS26B	NM_178027.3	NM_178027.3		69091	32129295	NM_178027.3	Vps26b	NP_821170.1	ILMN_2631192	004810458	S	3438	GCTGCAGTGTTTACATGTTTCTTAATGTGTTGTCTTTTCAATGGCTGTAT	9	-	26815435-26815484	9qA4	Mus musculus vacuolar protein sorting 26 homolog B (yeast) (Vps26b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A conserved multimeric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. For example, the budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p [goid 30904] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances into, out of or within a vacuole [goid 7034] [evidence IEA]		2310075A12Rik; 1810012I05Rik	2310075A12Rik; 1810012I05Rik
Mus musculus	RefSeq	ILMN_221816	ILMN_316700	LOC100041649	XM_001476987.1	XM_001476987.1		100041649	149263549	XM_001476987.1	LOC100041649	XP_001477037.1	ILMN_2740838	000160537	S	632	TAATTTTGAATGATGGTTTTATCTATAGCAATCTGTAGTAATATGTATAT	12	-	112096495-112096544	12qF1	PREDICTED: Mus musculus similar to brain protein 44-like protein, transcript variant 1 (LOC100041649), mRNA.					
Mus musculus	RefSeq	ILMN_186571	ILMN_234809	RET	NM_001080780.1	NM_001080780.1		19713	124256486	NM_001080780.1	Ret	NP_001074249.1	ILMN_1236477	004210441	S	4324	GGGCAGACACCAGACTGCTGCTTTCACATCCTTTGCACCCTACCCCCATC	6	-	118104733-118104782	6qF1	Mus musculus ret proto-oncogene (Ret), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation [goid 48484] [evidence IMP]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IDA]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IGI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence TAS]	RET51; PTC; RET9; c-Ret	RET51; PTC; RET9; c-Ret
Mus musculus	RefSeq	ILMN_234809	ILMN_234809	RET	NM_001080780.1	NM_001080780.1		19713	124256486	NM_001080780.1	Ret	NP_001074249.1	ILMN_3043469	004290491	I	4233	GTGTGCCTCGCGGAAGCCGACCATAATCCCACTTCCAGCTATGTGTCCAC	6	-	118104824-118104873	6qF1	Mus musculus ret proto-oncogene (Ret), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation [goid 48484] [evidence IMP]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IDA]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IGI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IGI]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence TAS]	RET51; PTC; RET9; c-Ret	RET51; PTC; RET9; c-Ret
Mus musculus	RefSeq	ILMN_223135	ILMN_223135	NPLOC4	NM_199469.1	NM_199469.1		217365	41054973	NM_199469.1	Nploc4	NP_955763.1	ILMN_2759770	004640020	S	3621	TCAAGCTAAAGCTACCACCTTGGGGTGAGCCCTACAGAAGGTTCAGACCC	11	-	120241998-120242047	11qE2	Mus musculus nuclear protein localization 4 homolog (S. cerevisiae) (Nploc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	RP23-82I5.6; mKIAA1499; Npl4; AK129375; KIAA1499	RP23-82I5.6; mKIAA1499; Npl4; AK129375; KIAA1499
Mus musculus	MEEBO	ILMN_220552	ILMN_220552	PACS1	scl53489.23_479	XM_283545.1			28525908	XM_283545.1	Pacs1		ILMN_2723639	006100162	S	4281	GTGGGAAGACTGGGGCCATGTTGGGTTTTTTCATTCAATAAACTGGTGAT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IDA]	The process of directing proteins towards the Golgi using signals contained within the protein [goid 42] [evidence IDA]			
Mus musculus	RefSeq	ILMN_214108	ILMN_244357	OLFR25	NM_146870.1	NM_146870.1		18323	22380658	NM_146870.1	Olfr25	NP_667081.1	ILMN_1239971	003520470	S	838	TTTTATACATTTTTGGTGCCCATGCTGAATCCCCTTATTTACAGCCTCAG	9	+	38138011-38138060	9qA5.1	Mus musculus olfactory receptor 25 (Olfr25), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MTPCR18; MOR170-4	MTPCR18; MOR170-4
Mus musculus	RefSeq	ILMN_198223	ILMN_198223	LOC225058	XM_140116.1	XM_140116.1			20901381	XM_140116.1	LOC225058		ILMN_2530916	004060209	S	19	CTTCGGACCAGGAAGTTCATGACCAACCGCCTGCTTCAGAGGAAACAGGT										
Mus musculus	RefSeq	ILMN_200998	ILMN_313238	LOC100040347	XM_001473962.1	XM_001473962.1		100040347	149272823	XM_001473962.1	LOC100040347	XP_001474012.1	ILMN_1257638	005910168	S	1485	ATGCAGGAACCACTTACCCTTAGGGCTGGAGAGCACATAGCCCGAGCCCT	Y|NT_161913.2	-	237404-237453		PREDICTED: Mus musculus hypothetical protein LOC100040347 (LOC100040347), mRNA.					
Mus musculus	Riken	ILMN_205632	ILMN_205632	6430553P18RIK	ri|6430553P18|PX00047K05|AK032465|2565					AK032465	6430553P18Rik		ILMN_2574062	002810131	S	2515	AGAAATCAGTTAGAGAGTTATGGCGGTACGAAGGGTCATTCCAAAGCCTG										
Mus musculus	RefSeq	ILMN_221782	ILMN_221782	OTUB2	NM_026580.1	NM_026580.1		68149	13386069	NM_026580.1	Otub2	NP_080856.1	ILMN_2898917	006580537	S	2546	CTGAGAACAGATGCAAGTGCTGGGGCCAGCTGCCCAAGTTCAACTGTGTG	12	+	103807157-103807206	12qE	Mus musculus OTU domain, ubiquitin aldehyde binding 2 (Otub2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	OTB2; AI413508; AW557219; 2010015L18Rik; OTU2; 4930586I02Rik	OTB2; AI413508; AW557219; 2010015L18Rik; OTU2; 4930586I02Rik
Mus musculus	RefSeq	ILMN_211528	ILMN_211528	4930417M19RIK	NM_177195.3	NM_177195.3		320571	126366050	NM_177195.3	4930417M19Rik	NP_796169.2	ILMN_2707931	006350370	S	627	CTAGCAGTGAGCCGTACGGCCTGACATACATTGAAACAGCAGACCTGGAC	4	+	43324787-43324836	4qA5	Mus musculus RIKEN cDNA 4930417M19 gene (4930417M19Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	Feta	Feta
Mus musculus	RefSeq	ILMN_225380	ILMN_225380	EG545047	NM_001034102.1	NM_001034102.1		545047	77539457	NM_001034102.1	EG545047	NP_001029274.1	ILMN_2919756	006290112	S	535	GGGAGAAGGCTGCTGTGTCAAATCCATGTGCCTGAGATTCAAAAACACTG	14	-	50633861-50633876:50633877-50633910	14qC2	Mus musculus predicted gene, EG545047 (EG545047), mRNA.				MGC118309	MGC118309
Mus musculus	RefSeq	ILMN_199178	ILMN_199178	LOC333841	XM_289936.2	XM_289936.2			38091625	XM_289936.2	LOC333841		ILMN_2534329	000130494	S	241	CACCAGCTGCTGCAGTTCAAGGGCTCCACATTTGCTTTAGTCATCATCAC										
Mus musculus	RefSeq	ILMN_211152	ILMN_211152	TBC1D16	NM_172443.2	NM_172443.2		207592	142347142	NM_172443.2	Tbc1d16	NP_766031.1	ILMN_1245248	006370026	S	2144	CCACGGATCAGATGCTGCTGCACTTCGGAAACCTGGCCATGCATATGAAT	11	-	119010265-119010314	11qE2	Mus musculus TBC1 domain family, member 16 (Tbc1d16), mRNA.				Tcd1d16; B930087K01; BC026530	Tcd1d16; B930087K01; BC026530
Mus musculus	MEEBO	ILMN_222212	ILMN_222212	C130040D06RIK	scl45729.1.1_31	XM_283202.1			28477763	XM_283202.1	C130040D06Rik		ILMN_2746366	000630079	S	2138	GTCTGGGAGGACAGTGGCCATGGATGACATTTTGTATGTAAGCGTCCTGG										
Mus musculus	MEEBO	ILMN_222212	ILMN_222212	C130040D06RIK	scl45729.1.1_31	XM_283202.1			28477763	XM_283202.1	C130040D06Rik		ILMN_1243360	003290482	S	2887	CATTTCCACACCTGCATCGACTGCGTGCTACTAAGCTTTAATATTTTGGC										
Mus musculus	RefSeq	ILMN_211464	ILMN_211464	OLFR292	NM_146620.2	NM_146620.2		258613	110665728	NM_146620.2	Olfr292	NP_666831.2	ILMN_1231223	003850110	S	453	GGTCTTCTTTTGTTCATGTGTAGAGATTCAATTCCTTACCACGATGGCCC	7	+	93843270-93843319	7qD3	Mus musculus olfactory receptor 292 (Olfr292), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR220-2	MOR220-2
Mus musculus	RefSeq	ILMN_197107	ILMN_225777	LOC226685	XM_994061.1	XM_994061.1		226685	94365810	XM_994061.1	LOC226685	XP_999155.1	ILMN_1235443	000130368	S	393	GGCATTTGGGAGAAAAGGCTTGAAGAAGGGATACGTGGTGGGGGGTGATG					PREDICTED: Mus musculus similar to Serum amyloid P-component precursor (SAP) (LOC226685), mRNA.					
Mus musculus	RefSeq	ILMN_192024	ILMN_237863	ARHGAP29	NM_172525.2	NM_172525.2		214137	142352258	NM_172525.2	Arhgap29	NP_766113.1	ILMN_2753687	005340551	S	4972	GTCTGAATGGGATGTAAAAGGGACAGCACACACAGTAGCCTTCCGTACGT	3	+	121718953-121719002	3qG1	Mus musculus Rho GTPase activating protein 29 (Arhgap29), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C76601; A830014I19; Parg1; 6720461J18Rik; B130017I01Rik; AU040217	C76601; A830014I19; Parg1; 6720461J18Rik; B130017I01Rik; AU040217
Mus musculus	RefSeq	ILMN_191009	ILMN_191009	TRAPPC5	NM_025701.3	NM_025701.3		66682	141802202	NM_025701.3	Trappc5	NP_079977.2	ILMN_2475271	004760128	S	1672	CCAGCCTCTCAAAGGGGGAAGAGCCCAGAACCATCTGGAAACTTGAGGGT	8	+	3680594-3680643	8qA1.1	Mus musculus trafficking protein particle complex 5 (Trappc5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A large complex present on the cis-Golgi that acts prior to SNARE complex assembly to mediate vesicle docking and fusion [goid 30008] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4021401A16Rik; TRS31	4021401A16Rik; TRS31
Mus musculus	Riken	ILMN_202891	ILMN_202891	8430417B06RIK	ri|8430417B06|PX00024L14|AK033377|2874					AK033377	8430417B06Rik		ILMN_1224154	007320131	S	2617	AGTGTGGAGAAGCTTGGTGGCGCTAATGACAGCCCCTCACTTCCCTTCTG										
Mus musculus	RefSeq	ILMN_220093	ILMN_309891	LOC100046080	XM_001475418.1	XM_001475418.1		100046080	149264133	XM_001475418.1	LOC100046080	XP_001475468.1	ILMN_1217480	000460370	S	135	GGATCCCGTGTGTTTTTGCTGAACTTGTAAAGGAGACATCTGGATGGTGG					PREDICTED: Mus musculus similar to Spindlin 1, transcript variant 1 (LOC100046080), mRNA.					
Mus musculus	RefSeq	ILMN_200750	ILMN_231525	2310014L17RIK	NM_029809.1	NM_029809.1		381845	58037476	NM_029809.1	2310014L17Rik	NP_084085.1	ILMN_1227487	000580735	S	912	ACGCCCGAGCTTGAGGAGGCTACCAAAGACCCAGTAGAGACTCAGGGGAT	7	+	13514094-13514143	7qA1	Mus musculus RIKEN cDNA 2310014L17 gene (2310014L17Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C77118; AV237412	C77118; AV237412
Mus musculus	RefSeq	ILMN_231525	ILMN_231525	2310014L17RIK	NM_029809.1	NM_029809.1		381845	58037476	NM_029809.1	2310014L17Rik	NP_084085.1	ILMN_2946672	003840475	S	2770	GGGAGCCAACAGTCCCATGTCCTCCTGAAGACTCTGAGGGATTCTATTTC	7	+	13515952-13516001	7qA1	Mus musculus RIKEN cDNA 2310014L17 gene (2310014L17Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C77118; AV237412	C77118; AV237412
Mus musculus	RefSeq	ILMN_200750	ILMN_231525	2310014L17RIK	NM_029809.1	NM_029809.1		381845	58037476	NM_029809.1	2310014L17Rik	NP_084085.1	ILMN_1214410	005090131	S	2086	CCTGGCAAGAGACACGGTATATTAAGGGTGGGCAGCGTTTTCCAGAATGA	7	+	13515268-13515317	7qA1	Mus musculus RIKEN cDNA 2310014L17 gene (2310014L17Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C77118; AV237412	C77118; AV237412
Mus musculus	MEEBO	ILMN_215922	ILMN_215922	2410026K10RIK	scl0066478.1_151	NM_025584.1			21313447	NM_025584.1	2410026K10Rik		ILMN_1232849	006840292	S	605	TGCAAATAGTCGGCCCCGCCTCCCGCCGTGAAATCACCGCATGCACCGCC										
Mus musculus	RefSeq	ILMN_216969	ILMN_216969	MCFD2	NM_176808.4	NM_176808.4		193813	146198683	NM_176808.4	Mcfd2	NP_789778.1	ILMN_2677560	004890307	S	1933	CCTTTTTAGCGTGGTTTGTATCCTTCCGAATGAACTCGCTTTTGAATCTT				17qE4	Mus musculus multiple coagulation factor deficiency 2 (Mcfd2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence ISA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810021C21Rik; LMAN1IP; F5F8D; Sdnsf	1810021C21Rik; LMAN1IP; F5F8D; Sdnsf
Mus musculus	RefSeq	ILMN_216969	ILMN_216969	MCFD2	NM_176808.4	NM_176808.4		193813	146198683	NM_176808.4	Mcfd2	NP_789778.1	ILMN_2693772	001170397	S	1763	AAGCAAGCAGCTGTTGACGTTGACTCTGTCCCCCATGAAGCCTCCTGCCG				17qE4	Mus musculus multiple coagulation factor deficiency 2 (Mcfd2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence ISA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810021C21Rik; LMAN1IP; F5F8D; Sdnsf	1810021C21Rik; LMAN1IP; F5F8D; Sdnsf
Mus musculus	Riken	ILMN_205093	ILMN_205093	D630040G04RIK	ri|D630040G04|PX00197N04|AK052735|708					AK052735	D630040G04Rik		ILMN_2569933	002650026	S	579	TGGCTCTCCTCATGTCTGCCCTGGAAACAAAGCCACTCAAAAAGAGGGTC										
Mus musculus	RefSeq	ILMN_217544	ILMN_217544	GPM6A	NM_153581.3	NM_153581.3		234267	145301596	NM_153581.3	Gpm6a	NP_705809.1	ILMN_2705495	007400240	S	2849	GGTCCTTTTGCTTTTTAACACTTAGATTATCTTAATGGTTCAACATTTTT				8qB1.3	Mus musculus glycoprotein m6a (Gpm6a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			M6A; Gpm6; MGC38999	M6A; Gpm6; MGC38999
Mus musculus	RefSeq	ILMN_202199	ILMN_255728	LOC668408	XM_001001317.1	XM_001001317.1		668408	94406015	XM_001001317.1	LOC668408	XP_001001317.1	ILMN_1252155	003890592	S	639	CCTCCAAGTGCTGGATTACAGGGGAACACCATCAGGTTACTGCCCACTCC	19	+	44015024-44015073	19qC3	PREDICTED: Mus musculus similar to sterile alpha motif domain containing 1 (LOC668408), mRNA.					
Mus musculus	MEEBO	ILMN_211409	ILMN_211409	D12ERTD551E	scl0052635.1_32	NM_028731.2			31980768	NM_028731.2	D12Ertd551e		ILMN_1253669	005220367	S	4165	GAGACATGATTGTGTGTTGAGTGGCTATTCTTTTCTTTTATTTTAACAAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	MEEBO	ILMN_211409	ILMN_211409	D12ERTD551E	scl0052635.1_32	NM_028731.2			31980768	NM_028731.2	D12Ertd551e		ILMN_1240131	004390722	S	2522	CAGTGGTGGCTTCCTGTCCAAAGATAAAGGGCTTCTTGGCAAAGTGCTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	Riken	ILMN_204053	ILMN_204053	KATNB1	ri|A130056M14|PX00123N24|AK037858|3119					AK037858	Katnb1		ILMN_2562001	001500669	S	2881	ACATTGTGGCCTGCCTAGAGGTCGCTGGAAGCAGAGACTGTCGTACTCCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A complex possessing an activity that couples ATP hydrolysis to the severing of microtubules; usually a heterodimer comprising a catalytic subunit (often 60kDa) and a regulatory subunit (often 80 kDa) [goid 8352] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with dynein, the multisubunit protein complex that is associated with microtubules [goid 45502] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_213109	ILMN_213109	D130079A08RIK	scl00320671.1_236	NM_177223.2			31343106	NM_177223.2	D130079A08Rik		ILMN_2762487	002450520	S	3101	CTCAGCGACACCCAGGTTCTTTCTTTCCCTGGTTATTAAAAGAAGTAAGA										
Mus musculus	MEEBO	ILMN_213109	ILMN_213109	D130079A08RIK	scl00320671.1_236	NM_177223.2			31343106	NM_177223.2	D130079A08Rik		ILMN_2633753	006180162	S	4045	GCTACCTAGCCACCCACACACAGAAGGTGCCAGCTAGCTACAGCAGTCAA										
Mus musculus	RefSeq	ILMN_219392	ILMN_219392	CDKN1C	NM_009876.3	NM_009876.3		12577	141803290	NM_009876.3	Cdkn1c	NP_034006.2	ILMN_2708203	004570451	S	1785	GCCCATACCAACTGCCCAGGGCTCCTCGTCCGCCAGGTTCTAAATAAAGA	7	-	150644259-150644308	7qF5	Mus musculus cyclin-dependent kinase inhibitor 1C (P57) (Cdkn1c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IMP]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p57Kip2; AL024410; Kip2; p57(kip2); CDKI	p57Kip2; AL024410; Kip2; p57(kip2); CDKI
Mus musculus	RefSeq	ILMN_195115	ILMN_250861	PTER	NM_008961.2	NM_008961.2		19212	89111133	NM_008961.2	Pter	NP_032987.1	ILMN_2618396	000360386	S	1497	GAATCATTTTGGATGTCTTCCCCAACCCTGACTCTGTGATCTGCACTACT	2	+	12922957-12923006	2qA1	Mus musculus phosphotriesterase related (Pter), mRNA.		The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism [goid 9056] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	AI790318; Mpr56-1	AI790318; Mpr56-1
Mus musculus	MEEBO	ILMN_216422	ILMN_216422	LENEP	scl057275.1_158				31543116	NM_020517	Lenep		ILMN_1235612	000460326	S	1370	AGCACTCTTTGGCCTAGCCATTGCCCACCTCTTACCTGCAGCACTGACCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]				
Mus musculus	RefSeq	ILMN_213814	ILMN_254085	OLFR769	NM_146267.1	NM_146267.1		257667	22128632	NM_146267.1	Olfr769	NP_666379.1	ILMN_2641077	003420424	S	558	CTGCTCAGACACGGCCTTTATAGAGAAAATTGTCTTAGCTTTTGCCATAC	10	-	128548872-128548921	10qD3	Mus musculus olfactory receptor 769 (Olfr769), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR114-14	MOR114-14
Mus musculus	Riken	ILMN_203377	ILMN_203377	9530005F04RIK	ri|9530005F04|PX00111G10|AK035247|1552					AK035247	9530005F04Rik		ILMN_1228974	000020468	S	445	TCCCAAAGGCAGAGCCCTGGACCCCGAGATCCAGTTGGACTCCAGGAGGT										
Mus musculus	RefSeq	ILMN_201452	ILMN_201452	LOC385192	XM_358110.1	XM_358110.1			38093949	XM_358110.1	LOC385192		ILMN_1218781	000520156	S	308	CACATGCTGGACAGAAACCTTATGAATGTAATCAGTGCGGTAAAGCCTTG										
Mus musculus	Riken	ILMN_203085	ILMN_203085	A430095M13RIK	ri|A430095M13|PX00139F05|AK079867|1177					AK079867	A430095M13Rik		ILMN_2554621	002260711	S	797	CCAGAGTACATCTGCTTTTGGATAAAAACTTTCTGTGTGTAGCTGTCTGG										
Mus musculus	RefSeq	ILMN_188890	ILMN_188890	ZC3H6	NM_178404.2	NM_178404.2		78751	31341560	NM_178404.2	Zc3h6	NP_848491.1	ILMN_1230396	000380368	S	3806	CACCCCACTGAGATGGCAGGTATATTCCAATGTATATGGTTCCAATAAAC	2	+	128844233-128844282	2qF1	Mus musculus zinc finger CCCH type containing 6 (Zc3h6), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AU024389; Zc3hdc6; 4833425H18Rik; mKIAA2035; 4631426G04Rik; KIAA2035; AW060453	AU024389; Zc3hdc6; 4833425H18Rik; mKIAA2035; 4631426G04Rik; KIAA2035; AW060453
Mus musculus	RefSeq	ILMN_232841	ILMN_232841	D330017J20RIK	NM_001037740.1	NM_001037740.1		320609	83627723	NM_001037740.1	D330017J20Rik	NP_001032829.1	ILMN_3150313	004120537	A	4541	GGGAGCTATCAGTACCTCTGTGCTTCGGGTAGCAGGGTTTCCTACTGTGG	6	+	29908936-29908985	6qA3.3	Mus musculus RIKEN cDNA D330017J20 gene (D330017J20Rik), transcript variant 2, mRNA. XM_899022 XM_909461 XM_921304 XM_921310 XM_921314 XM_921319 XM_921325	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FAM40B; mKIAA1170	FAM40B; mKIAA1170
Mus musculus	Riken	ILMN_205544	ILMN_205544	APC	ri|E330025A09|PX00212B19|AK054433|3478					AK054433	Apc		ILMN_1223492	002320242	S	1033	ACAGCCAACAGTTTAACCAAGTGGGTCCTGCTGCCTTGCTTTCGCTGCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence ISO]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IMP]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IMP]; The establishment, maintenance and elaboration of a pattern along a line or a point [goid 9798] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IDA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]		
Mus musculus	RefSeq	ILMN_214624	ILMN_214624	S1PR3	NM_010101.3	NM_010101.3		13610	141802975	NM_010101.3	S1pr3	NP_034231.1	ILMN_2650032	004920349	S	3784	AACTACATTTGATGCCCAATCACTAAGTCCCTTTTATCCCCCAGGGCCAT	13	+	51517612-51517661	13qA5	Mus musculus sphingosine-1-phosphate receptor 3 (S1pr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IDA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; Any process that modulates the frequency, rate, or extent of interleukin-1 beta production [goid 32651] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence TAS]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IEA]	AI132464; LPb3; S1P3	AI132464; LPb3; S1P3
Mus musculus	Riken	ILMN_205941	ILMN_205941	C130066B05RIK	ri|C130066B05|PX00170O16|AK048493|3685					AK048493	C130066B05Rik		ILMN_1242658	006760711	S	3445	CCTAGGGGCTGCCAGCTACAGGAGACTGATTTTGTGACCCCCACTAGCTA										
Mus musculus	MEEBO	ILMN_213033	ILMN_213033	1300007L22RIK	scl071774.7_27	NM_027917.1			28076984	NM_027917.1	1300007L22Rik		ILMN_2632839	007610161	S	2533	TTCCTAGGACACATCTTCCCACGGTGTTCTCCTGTGACCTTATTCAAGTT										
Mus musculus	RefSeq	ILMN_218023	ILMN_218023	PCBD1	NM_025273.2	NM_025273.2		13180	133892664	NM_025273.2	Pcbd1	NP_079549.1	ILMN_2690575	000830424	S	376	CCCTGACTCTTATTTGCTTGGGGGAAGGAGTGACTGGAGGAGGAACCTAG	10	+	60556659-60556708	10qB4	Mus musculus pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1 (Pcbd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]	The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of nonidentical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51291] [evidence IPI]; The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits [goid 51289] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [evidence ISA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7,8-tetrahydro-4-alpha-hydroxypterin = (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7,8-dihydro-6H-pterin + H2O [goid 8124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Catalysis of the reaction: L-phenylalanine + tetrahydrobiopterin + O2 = L-tyrosine + 4-alpha-hydroxytetrahydrobiopterin [goid 4505] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISA]	Pcbd; Dcoh	Pcbd; Dcoh
Mus musculus	RefSeq	ILMN_229988	ILMN_229988	XLR5A	NM_001045539.1	NM_001045539.1		574438	113865916	NM_001045539.1	Xlr5a	NP_001039004.1	ILMN_2946345	001690541	S	1455	TCAGCCTGTATCTGTGTAAGTATTTGTGGCTCCAGTGTTTTGGAGGGGTC	X	-	70359302-70359351	XqA7.3	Mus musculus X-linked lymphocyte-regulated 5A (Xlr5a), mRNA.				Xlr5d; MGC60416	Xlr5d; MGC60416
Mus musculus	RefSeq	ILMN_217053	ILMN_217053	LASS6	NM_172856.1	NM_172856.1		241447	27370295	NM_172856.1	Lass6	NP_766444.1	ILMN_2900016	004760048	S	3809	GGGGGGAAAGTAGGAAATCAAGTAGACTTTGGCCTAGAGTCAGTAATTGA	2	+	68912008-68912057	2qC2	Mus musculus longevity assurance homolog 6 (S. cerevisiae) (Lass6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence IDA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]	T1L; AW544719; 4732462C07Rik	T1L; AW544719; 4732462C07Rik
Mus musculus	Riken	ILMN_201633	ILMN_201633	1110020N13RIK	ri|1110020N13|R000016B06|AK003877|571					AK003877	1110020N13Rik		ILMN_1254950	003870463	S	513	GCCAGGCAAGGATTTGTATGGCCTTTGATTTTTGCATAGAGTAAACACCT										
Mus musculus	RefSeq	ILMN_201551	ILMN_201551	HTRA2	NM_019752.2	NM_019752.2		64704	31980990	NM_019752.2	Htra2	NP_062726.2	ILMN_1230193	005090538	S	1502	ACCCCCGAGGTCACAGAATGAATGACTGGACCGGCAAGAGTGTGAAGCTC	6	-	83001433-83001462:83001463-83001482	6qC3	Mus musculus HtrA serine peptidase 2 (Htra2), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mnd2; Omi; AI481710; Prss25	mnd2; Omi; AI481710; Prss25
Mus musculus	RefSeq	ILMN_201551	ILMN_201551	HTRA2	NM_019752.2	NM_019752.2		64704	31980990	NM_019752.2	Htra2	NP_062726.2	ILMN_2688944	002850561	S	926	GGAAGCCCCTTTGCACTGCAGAACACGATCACATCTGGTATTGTCAGCTC	6	-	83003398-83003447	6qC3	Mus musculus HtrA serine peptidase 2 (Htra2), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mnd2; Omi; AI481710; Prss25	mnd2; Omi; AI481710; Prss25
Mus musculus	RefSeq	ILMN_201551	ILMN_201551	HTRA2	NM_019752.2	NM_019752.2		64704	31980990	NM_019752.2	Htra2	NP_062726.2	ILMN_1240553	006620414	S	1137	TTGCCATCCCTTCTGATCGCCTTAGGGAGTTTCTGCATCGCGGGGAAAAG	6	-	83002695-83002744	6qC3	Mus musculus HtrA serine peptidase 2 (Htra2), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mnd2; Omi; AI481710; Prss25	mnd2; Omi; AI481710; Prss25
Mus musculus	MEEBO	ILMN_186686	ILMN_186686	2410044A07RIK	scl069991.2_21						2410044A07Rik		ILMN_1249068	007000341	S	19	TTGGTGGGAGAGAGGTAGTTATCCCAGGAAGCAAGCATGAGGTCAGGGGC										
Mus musculus	Riken	ILMN_204485	ILMN_204485	B130018C03RIK	ri|B130018C03|PX00157O18|AK044991|2646					AK044991	B130018C03Rik		ILMN_2565340	000380025	S	2301	CTGCTTGTAAGCTGCCAGTTTCTTTCTTGACAGGCTGTTCTCTTGCCTCT										
Mus musculus	RefSeq	ILMN_211028	ILMN_211028	FBXL5	NM_178729.3	NM_178729.3		242960	142385003	NM_178729.3	Fbxl5	NP_848844.1	ILMN_1238032	001470132	S	1807	GGGAGTGAAAAGTCTGACCAAGAGACTGGACGAGTACTTTTGTTCCTCAG	5	-	44149499-44149548	5qB3	Mus musculus F-box and leucine-rich repeat protein 5 (Fbxl5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fir4; Fbl4	Fir4; Fbl4
Mus musculus	RefSeq	ILMN_211028	ILMN_211028	FBXL5	NM_178729.3	NM_178729.3		242960	142385003	NM_178729.3	Fbxl5	NP_848844.1	ILMN_2662020	006520020	S	3997	AACTTCGTGCATTAGTTTTGTGAGTTTACTAAGTCTTCTGAGCTTCTCCC	5	-	44147309-44147358	5qB3	Mus musculus F-box and leucine-rich repeat protein 5 (Fbxl5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fir4; Fbl4	Fir4; Fbl4
Mus musculus	RefSeq	ILMN_211028	ILMN_211028	FBXL5	NM_178729.3	NM_178729.3		242960	142385003	NM_178729.3	Fbxl5	NP_848844.1	ILMN_2663534	003130605	S	2764	GCTCCAACCCTTTTAAGTGGAGAGAAGTGGGAGTAAAGTGTTGCATATCT	5	-	44148542-44148591	5qB3	Mus musculus F-box and leucine-rich repeat protein 5 (Fbxl5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Fir4; Fbl4	Fir4; Fbl4
Mus musculus	RefSeq	ILMN_244537	ILMN_244537	OLFR504	NM_001011858.1	NM_001011858.1		258163	58801473	NM_001011858.1	Olfr504	NP_001011858.1	ILMN_3161078	006900113	S	466	CTGAGAAATGGCTTCTGTGTCATTTCAGTGCCTGTGCTTGCATCCCAGTG	7	-	115708792-115708841	7qE3	Mus musculus olfactory receptor 504 (Olfr504), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR40-7P; MOR40-15; MGC129264	MOR40-7P; MOR40-15; MGC129264
Mus musculus	MEEBO	ILMN_188542	ILMN_188542	9330182L06RIK	scl26917.22_260				27370029	NM_172706	9330182L06Rik		ILMN_2453554	005810338	S	10	TGGAGCCTTAAATACTTCATTAAGTCAACTGTTGTGTATAACATCTCTTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_212275	ILMN_212275	EPX	NM_007946.2	NM_007946.2		13861	145966839	NM_007946.2	Epx	NP_031972.2	ILMN_1238851	006200402	S	2446	CCACTTACCTCGGGAACCTCTTAGATAGCACATTATGAATCAGCACCAGG				11qC	Mus musculus eosinophil peroxidase (Epx), mRNA.		The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	EPO	EPO
Mus musculus	RefSeq	ILMN_217961	ILMN_217961	TMEM118	NM_172998.2	NM_172998.2		269695	142381588	NM_172998.2	Tmem118	NP_766586.1	ILMN_1221852	003990168	S	4319	GGGACATGTCTTTGGTGTCTTTGAGAACCTTCTGCCAATAAACCTCCCCC	5	-	118640757-118640806	5qF	Mus musculus transmembrane protein 118 (Tmem118), mRNA.				AW049082; B830028P19Rik	AW049082; B830028P19Rik
Mus musculus	RefSeq	ILMN_214691	ILMN_231010	SNED1	NM_172463.3	NM_172463.3		208777	40254324	NM_172463.3	Sned1	NP_766051.3	ILMN_1226009	001510487	S	5564	AAATTATTTGGTTTTAAAATATTTATATGGTAATAAGTCACTTGAAATAT	1	+	95194059-95194108	1qD	Mus musculus sushi, nidogen and EGF-like domains 1 (Sned1), mRNA.		The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI197264; SST3; Snep; 6720455I24Rik; AI642697	AI197264; SST3; Snep; 6720455I24Rik; AI642697
Mus musculus	MEEBO	ILMN_191641	ILMN_191641	ADAMTS18	scl34295.23_345				27369628	NM_172466	Adamts18		ILMN_1256970	002600059	S	1	CACGTCTCAGATGAGAGTTTCGATCGTCGGGAGCCAGCTGTTGATGGGCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223096	ILMN_223096	RNASE6	NM_030098.1	NM_030098.1		78416	45433496	NM_030098.1	Rnase6	NP_084374.1	ILMN_2759309	000430703	S	843	GGACCAAGCCGCTGAACAATTTATCCTGCAATTTTTTGGGTCAAGCTTTA	14	+	51750590-51750639	14qC1	Mus musculus ribonuclease, RNase A family, 6 (Rnase6), mRNA.			Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	9530043P15Rik	9530043P15Rik
Mus musculus	RefSeq	ILMN_241069	ILMN_241069	KCNRG	NM_001039105.2	NM_001039105.2		328424	141802287	NM_001039105.2	Kcnrg	NP_001034194.1	ILMN_3163138	006660161	A	548	CACTGTGGCTCCGATGGCGCTGCTGAGAACCAAGCTGGAGTCAGGTACAT	14	+	62226866-62226909:62230489-62230494	14qD1	Mus musculus potassium channel regulator (Kcnrg), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	E030012H22Rik; Gm745	E030012H22Rik; Gm745
Mus musculus	RefSeq	ILMN_198864	ILMN_198864	LOC244406	XM_146275.2	XM_146275.2			38089174	XM_146275.2	LOC244406		ILMN_2533191	005080220	S	1020	GGCTGTTTATGGAGAGCCCAGAGGAGGAAAAGGGCAGGGTTTGCAGCCCT										
Mus musculus	Riken	ILMN_204858	ILMN_204858	CCNC	ri|A130067E11|PX00124J04|AK037957|2158					AK037957	Ccnc		ILMN_1259110	000430615	S	984	GCTCCCTGAGTGACTCTCCACTAATGGCAGGGCCTGAAGCTGCAAGATGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_209057	ILMN_209057	CCDC109B	NM_025779.2	NM_025779.2		66815	31982669	NM_025779.2	Ccdc109b	NP_080055.2	ILMN_1224021	006620609	S	1028	GAAATCGCAGCGGCGGTGTTTTGATGTGGAACAATACAACAAGCTAAAGG	3	-	129618634-129618683	3qG3	Mus musculus coiled-coil domain containing 109B (Ccdc109b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9030408N13Rik	9030408N13Rik
Mus musculus	RefSeq	ILMN_260773	ILMN_260773	SVAL3	NM_001003952.1	NM_001003952.1		387564	56710337	NM_001003952.1	Sval3	NP_001003952.1	ILMN_3160444	003890424	S	39	CATGCTCCTGATTCTGAGCCTACTTCTGGAGACTGCCTATGGTCAAGACA	6	+	41918177-41918226	6qB2.1	Mus musculus seminal vesicle antigen-like 3 (Sval3), mRNA.					
Mus musculus	RefSeq	ILMN_222030	ILMN_222030	CABP1	NM_013879.1	NM_013879.1		29867	7304938	NM_013879.1	Cabp1	NP_038907.1	ILMN_2816577	000050307	S	913	CACTGTGAGAGACTTGGCGCCTTGCATGTCCTCTACCGGCTTGGCACTGT				5qF	Mus musculus calcium binding protein 1 (Cabp1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210589	ILMN_210589	TBC1D14	NM_133910.2	NM_133910.2		100855	31559984	NM_133910.2	Tbc1d14	NP_598671.2	ILMN_2654197	005220025	S	1506	GTTGCACAGTATTTTGGGCGCTTATACTTGTTACCGGCCGGATGTGGGTT	5	-	36851010-36851059	5qB3	Mus musculus TBC1 domain family, member 14 (Tbc1d14), mRNA. XM_922942 XM_922947 XM_922957 XM_922966 XM_922971 XM_922978 XM_922985 XM_922993	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	MGC102624; D5Ertd110e; C86258; 2810413P16Rik; mKIAA1322; AU043625	MGC102624; D5Ertd110e; C86258; 2810413P16Rik; mKIAA1322; AU043625
Mus musculus	RefSeq	ILMN_210065	ILMN_210065	MRPL52	NM_026851.2	NM_026851.2		68836	142387454	NM_026851.2	Mrpl52	NP_081127.1	ILMN_2601865	000010630	S	333	GGAACATGATCTCAAACCTAAAGGGACTTTACTGAGAAGCCCACTTCCGA	14	+	55048508-55048557	14qC2	Mus musculus mitochondrial ribosomal protein L52 (Mrpl52), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110047B07Rik	1110047B07Rik
Mus musculus	Riken	ILMN_204876	ILMN_204876	A230001G09RIK	ri|A230001G09|PX00126F17|AK038383|2309					AK038383	A230001G09Rik		ILMN_1234175	004920037	S	2118	ACATCCAGTTTTCTGTGTGCAGCAGTGATGAGGGCTCTGGTATCCAGCTC										
Mus musculus	RefSeq	ILMN_209287	ILMN_209287	OLFR552	NM_147102.2	NM_147102.2		259106	121583539	NM_147102.2	Olfr552	NP_667313.2	ILMN_2594364	003780445	S	765	ACCTGTAGTCATCTCCTCAGTCATGCATCGTGTGGCTCGTCGGGCTGCTC	7	+	109753634-109753683	7qE3	Mus musculus olfactory receptor 552 (Olfr552), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR28-1	MOR28-1
Mus musculus	RefSeq	ILMN_215518	ILMN_215518	AKR1C18	NM_134066.2	NM_134066.2		105349	141802036	NM_134066.2	Akr1c18	NP_598827.1	ILMN_1260323	000620167	S	981	CTTTCCATTCTTCGATGAATATTAAGATGGAGGCCCTTGCCACGAGTTCT	13	-	4132014-4132039:4132040-4132063	13qA1	Mus musculus aldo-keto reductase family 1, member C18 (Akr1c18), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]	The reproductive process in which the parent is separated from its offspring either by giving birth to live young or by laying eggs [goid 7567] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants [goid 6709] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants [goid 6709] [evidence IMP]; The chemical reactions and pathways involving progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants [goid 42448] [evidence ISO]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: NAD(P)+ + 17-alpha,20-alpha-dihydroxypregn-4-en-3-one = NAD(P)H + H+ + 17-alpha-hydroxyprogesterone [goid 47006] [evidence IDA]; Catalysis of the reaction: NAD(P)+ + 17-alpha,20-alpha-dihydroxypregn-4-en-3-one = NAD(P)H + H+ + 17-alpha-hydroxyprogesterone [goid 47006] [evidence ISO]; Catalysis of the reaction: NAD(P)+ + 17-alpha,20-alpha-dihydroxypregn-4-en-3-one = NAD(P)H + H+ + 17-alpha-hydroxyprogesterone [goid 47006] [evidence IMP]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AW146047	AW146047
Mus musculus	MEEBO	ILMN_186810	ILMN_186810	E130113K22RIK	scl00239510.1_118				51829736	XM_484476	E130113K22Rik		ILMN_1224945	001820095	S	1	GCTACCCACAATTAGGCTAGGACTTCCTACCTAACTTACTGCAGTCTAGA										
Mus musculus	RefSeq	ILMN_199488	ILMN_199488	LOC383556	XM_357121.1	XM_357121.1			38073350	XM_357121.1	LOC383556		ILMN_2535400	003930477	S	137	ATCTGGACAAAGCCAAGAGGTGGTACAAGGGCAAGAGTGGTCGTGTGCAC										
Mus musculus	RefSeq	ILMN_216872	ILMN_245245	SFRS2IP	NM_028148.2	NM_028148.2		72193	117647276	NM_028148.2	Sfrs2ip	NP_082424.2	ILMN_2713449	004900097	S	4547	GGCCAATCTGGTTAAGGCGTACGTAGACAAGTACAGATACTCGCGGAAGA	15	-	96245256-96245305	15qF1	Mus musculus splicing factor, arginine/serine-rich 2, interacting protein (Sfrs2ip), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI462454; 1110061H03Rik; SIP1; CASP11; mKIAA3013; 2610510E10Rik; SRRP129	AI462454; 1110061H03Rik; SIP1; CASP11; mKIAA3013; 2610510E10Rik; SRRP129
Mus musculus	RefSeq	ILMN_197639	ILMN_197639	LOC239369	XM_139382.3	XM_139382.3			38077040	XM_139382.3	LOC239369		ILMN_2528835	005420626	S	1727	ACACGATAACTGCCCAACAACGTAAGAGGGCGGTTCAGGTCGTGCCACTC										
Mus musculus	MEEBO	ILMN_192269	ILMN_192269	2610203C20RIK	scl070455.2_3						2610203C20Rik		ILMN_1247962	007380711	S	4	GTGGTGTAATCTTCATTTATCTGTATCACTAATTCAAGAAGACTTTGGCC										
Mus musculus	MEEBO	ILMN_219471	ILMN_219471	CTSH	scl36630.14.1_50				7106278	NM_007801	Ctsh		ILMN_2775154	003840110	S	1206	GACAAGCCCACCCACGTGACATCATCACCAGAAATACGCTTGGATTGTGG						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221547	ILMN_258559	OLFR583	NM_146757.1	NM_146757.1		258752	22129330	NM_146757.1	Olfr583	NP_666968.1	ILMN_2737050	004220669	S	698	CTGTCCTCAATATTGCTTTCTCTGAAGAAAGGCACAAGGCCTTTAGCACC	7	+	110200511-110200560	7qE3	Mus musculus olfactory receptor 583 (Olfr583), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR14-6	MOR14-6
Mus musculus	RefSeq	ILMN_261203	ILMN_261203	LPHN1	NM_181039.1	NM_181039.1		330814	56118950	NM_181039.1	Lphn1	NP_851382.1	ILMN_2783852	006580347	S	4163	GAGGAGTGGGTCCTGGGTTTGGATCTTTCTCTAGGGGGTCCTCTTACCCC	8	+	86463781-86463830	8qC3	Mus musculus latrophilin 1 (Lphn1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	CLIBA; Lec2; 2900070I05Rik; MGC109680; AI182398; mKIAA0821	CLIBA; Lec2; 2900070I05Rik; MGC109680; AI182398; mKIAA0821
Mus musculus	RefSeq	ILMN_247795	ILMN_247795	4930451C15RIK	NM_029053.1	NM_029053.1		74685	110625988	NM_029053.1	4930451C15Rik	NP_083329.1	ILMN_3006143	002480326	S	879	GGAGCCCTGAAGTTGGGATTGGGTCTGCAAGTCAATCAGACGCTGCGGAT				16qA3	Mus musculus RIKEN cDNA 4930451C15 gene (4930451C15Rik), mRNA. XM_922208 XM_990304 XM_990331 XM_990387			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mCP17390; mCG12354	mCP17390; mCG12354
Mus musculus	RefSeq	ILMN_191125	ILMN_229339	WHRN	NM_001008792.1	NM_001008792.1		73750	57862815	NM_001008792.1	Whrn	NP_001008792.1	ILMN_2476329	002940661	S	3927	CCCAGCCTATCCCAGAGGCCTTGCAGGCGACCAGCAATGTCAGTGTATTT	4	-	63075995-63076044	4qC1	Mus musculus whirlin (Whrn), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of inner ear receptor cells [goid 60122] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C430046P22Rik; 1110035G07Rik; bM340H1.8; wi; AW742671; mKIAA1526; AW122018	C430046P22Rik; 1110035G07Rik; bM340H1.8; wi; AW742671; mKIAA1526; AW122018
Mus musculus	RefSeq	ILMN_217084	ILMN_217084	SRRM2	NM_175229.3	NM_175229.3		75956	126157503	NM_175229.3	Srrm2	NP_780438.2	ILMN_3028894	002480040	I	5156	CCCGATCCCGCTCACGGAGAGAGAAAACCAGAACAACCCGACGCAGAGAT	17	+	23956248-23956297	17qA3.3	Mus musculus serine/arginine repetitive matrix 2 (Srrm2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		5033413A03Rik; mKIAA0324; AA410130	5033413A03Rik; mKIAA0324; AA410130
Mus musculus	RefSeq	ILMN_217084	ILMN_217084	SRRM2	NM_175229.3	NM_175229.3		75956	126157503	NM_175229.3	Srrm2	NP_780438.2	ILMN_3102072	003420273	A	8332	GAGGGGCACAGCTCAGGACATCTAGGCCTCAGATTGTGATGATCCAGGGA	17	+	23961442-23961491	17qA3.3	Mus musculus serine/arginine repetitive matrix 2 (Srrm2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		5033413A03Rik; mKIAA0324; AA410130	5033413A03Rik; mKIAA0324; AA410130
Mus musculus	RefSeq	ILMN_217323	ILMN_217323	MST1	NM_008243.2	NM_008243.2		15235	31982292	NM_008243.2	Mst1	NP_032269.2	ILMN_2847887	007040369	S	1951	CCGAGGACACATACAAGAGAGTGAGATATGCCCCCAGGGAATGGTGGTCC	9	+	107986897-107986946	9qF2	Mus musculus macrophage stimulating 1 (hepatocyte growth factor-like) (Mst1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IC ]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	D9H3F15S2; D3F15S2h; DNF15S2h; Hgfl	D9H3F15S2; D3F15S2h; DNF15S2h; Hgfl
Mus musculus	RefSeq	ILMN_196971	ILMN_196971	LOC380772	XM_358423.1	XM_358423.1			38050491	XM_358423.1	LOC380772		ILMN_1224590	000050180	S	673	GGGCCGCTCCTTTCCAGTCTGATTGAGTACCTGGCTCCAGACCATTTCCC										
Mus musculus	RefSeq	ILMN_193694	ILMN_193694	TRHDE	NM_146241.1	NM_146241.1		237553	22122816	NM_146241.1	Trhde	NP_666353.1	ILMN_2838727	007550719	S	5042	GCAGAACTGCCCAAAGTGGTAGACATGGCTGTCTTGTTTTGCTCCTGACG	10	-	113836501-113836550	10qD2	Mus musculus TRH-degrading enzyme (Trhde), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	9330155P21Rik; MGC40831	9330155P21Rik; MGC40831
Mus musculus	Riken	ILMN_205752	ILMN_205752	A430072H19RIK	ri|A430072H19|PX00137H15|AK040173|1750					AK040173	A430072H19Rik		ILMN_2574958	000870672	S	1453	CCAGTGCCACCCTCCATTATGGCTGTCGCCTGCACCAGTCAGCTATGTCT										
Mus musculus	MEEBO	ILMN_222886	ILMN_222886	C630025L14	scl00210980.1_280	NM_172489.1			27369665	NM_172489.1	C630025L14		ILMN_2756226	007510692	S	2270	TGCCCTCAATTCTCAGTCAACACGTGACTTGGGACACATACCCGGGGAGT										
Mus musculus	MEEBO	ILMN_224239	ILMN_224239	HS2ST1	scl21426.8_443				31542964	NM_011828	Hs2st1		ILMN_2777202	007570491	S	4428	GTCACACAGTCCCTAACATCCGCTGCTTCTGGCCTCCTGAGCATTGGATT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan [goid 15014] [evidence IMP]; The chemical reactions and pathways involving heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells. They are similar to heparan sulfates but are of somewhat higher average Mr (6000-20000) and contain fewer N-acetyl groups and more N-sulfate and O-sulfate groups; they may be attached in the same manner to protein, forming proteoglycans. They consist predominantly of alternating alpha1->4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 30202] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + heparan sulfate = adenosine 3',5'-bisphosphate + heparan sulfate 2-O-sulfate; results in 2-O-sulfation of iduronic acid residues in heparan sulfate [goid 4394] [evidence IMP]		
Mus musculus	RefSeq	ILMN_242939	ILMN_242939	MTG1	NM_199301.1	NM_199301.1		212508	40556273	NM_199301.1	Mtg1	NP_955005.1	ILMN_3007236	005220735	S	1052	CAGCTGGAGTGTTTAATGCTTAGGACTGCTCCTCCAGTTCAGAAGCTCTC	7	+	147336233-147336282	7qF4	Mus musculus mitochondrial GTPase 1 homolog (S. cerevisiae) (Mtg1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC28365; Gtpbp7; Gm169	MGC28365; Gtpbp7; Gm169
Mus musculus	RefSeq	ILMN_188338	ILMN_188338	TNRC4	NM_172434.2	NM_172434.2		78784	133892434	NM_172434.2	Tnrc4	NP_766022.1	ILMN_2451819	002810296	S	2665	GTTCTCTACTCTTATTTATTGAGTTTTACTTTTAAAGAGTTGGTCTTTTC	3	+	94296036-94296085	3qF2.1	Mus musculus trinucleotide repeat containing 4 (Tnrc4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	CAGH4; BRUNOL1; 4930415M08Rik; ERDA4; Celf3	CAGH4; BRUNOL1; 4930415M08Rik; ERDA4; Celf3
Mus musculus	MEEBO	ILMN_195145	ILMN_195145	COBL	scl40507.18_520				32441275	NM_172496	Cobl		ILMN_1215003	005810561	S	5	GTCGTGTGGACTTCATGCTACAGTGTCCATCCTGCCTACAAAATGGAGGG							The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_201482	ILMN_201482	LOC382184	XM_356289.1	XM_356289.1			38094090	XM_356289.1	LOC382184		ILMN_2542453	002000170	S	670	GCCCCCTATTTTGGGCAGATGAGAAATCTTCGCAAAGTCTTCCTGTCACC										
Mus musculus	RefSeq	ILMN_220215	ILMN_220215	HIST1H2BF	NM_178195.1	NM_178195.1		319180	30061382	NM_178195.1	Hist1h2bf	NP_835502.1	ILMN_2719202	000150148	S	15	TAAGTCCGCTCCCGCCCCGAAGAAGGGCTCCAAGAAGGCCGTGACCAAGG	13	-	23665995-23666044	13qA3.1	Mus musculus histone cluster 1, H2bf (Hist1h2bf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217630	ILMN_214583	IL17RD	NM_134437.3	NM_134437.3		171463	124378058	NM_134437.3	Il17rd	NP_602319.1	ILMN_1248657	007400603	S	8062	GCACTGTGCCATATTTTTACATTGGCGATATTGCTGGTATATTGTGGTAT	14	+	27920314-27920363	14qA3	Mus musculus interleukin 17 receptor D (Il17rd), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2810004A10Rik; Sef-S; Sef; AI428510; MGC118454	2810004A10Rik; Sef-S; Sef; AI428510; MGC118454
Mus musculus	RefSeq	ILMN_199441	ILMN_199441	OLFR1380	NM_207573.1	NM_207573.1		404336	46430601	NM_207573.1	Olfr1380	NP_997456.1	ILMN_1216243	002340187	S	882	GGATGTGAAAGGAGCGCTGTGGAAGGTGCTGGGCAGAGGCACAGACTCAG	11	+	49378306-49378355	11qB1.2	Mus musculus olfactory receptor 1380 (Olfr1380), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129190; MGC129191	MGC129190; MGC129191
Mus musculus	RefSeq	ILMN_199441	ILMN_199441	OLFR1380	NM_207573.1	NM_207573.1		404336	46430601	NM_207573.1	Olfr1380	NP_997456.1	ILMN_2723955	000940468	S	878	ACAAGGATGTGAAAGGAGCGCTGTGGAAGGTGCTGGGCAGAGGCACAGAC	11	+	49378302-49378351	11qB1.2	Mus musculus olfactory receptor 1380 (Olfr1380), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129190; MGC129191	MGC129190; MGC129191
Mus musculus	MEEBO	ILMN_189103	ILMN_189103	D930030D11RIK	scl49120.3.1_299				31343241	NM_177281	D930030D11Rik		ILMN_2608115	003130500	S	2446	CACTTAAAGAAAAATGTGGAAAACTATTAAAAATATTACCAGTAAGATAG										
Mus musculus	MEEBO	ILMN_189103	ILMN_189103	D930030D11RIK	scl49120.3.1_299				31343241	NM_177281	D930030D11Rik		ILMN_2458398	005890445	S	7	TAACCATTTTAAATATAAATCCCAATTTTGCTAAGTATACTCACATTACT										
Mus musculus	Riken	ILMN_205620	ILMN_205620	D130035M05RIK	ri|D130035M05|PX00183N22|AK051333|3258					AK051333	D130035M05Rik		ILMN_1216107	004290398	S	3039	CCCTAAGCTTGACCTAGTCACCATGAACTCCTATCCTATCTCCTGGCAGC										
Mus musculus	Riken	ILMN_206013	ILMN_206013	B230304I02RIK	ri|B230304I02|PX00158L16|AK045688|1116					AK045688	B230304I02Rik		ILMN_1258893	002900025	S	966	ACCTGGGTAGCTCACAACCACCCTCACTACACTTCTAGGTGATCCAACTC										
Mus musculus	RefSeq	ILMN_213848	ILMN_213848	OLFR1508	NM_020513.2	NM_020513.2		57270	112821657	NM_020513.2	Olfr1508	NP_065259.1	ILMN_2641420	004050671	S	1384	CTGAGGACAAGGTTGTGTCTGTGTTTTTCACTGCTGTTACCCCTCTACTG	14	-	53088559-53088608	14qC2	Mus musculus olfactory receptor 1508 (Olfr1508), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR244-4; MOR244-2; Mor10; Or10	MOR244-4; MOR244-2; Mor10; Or10
Mus musculus	RefSeq	ILMN_217748	ILMN_217748	ARSJ	NM_173451.2	NM_173451.2		271970	142367266	NM_173451.2	Arsj	NP_775627.1	ILMN_1237725	001580681	S	3006	TCCCTTGAATCACGAGAGGAACTGTGACCCACCGTGTACTTGAGTGCAGG	3	+	126142608-126142657	3qG1	Mus musculus arylsulfatase J (Arsj), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the hydrolysis of the 4-sulfate groups of the N-acetyl-D-galactosamine 4-sulfate units of chondroitin sulfate and dermatan sulfate [goid 3943] [evidence IEA]	D830047F08; 9330196J05Rik	D830047F08; 9330196J05Rik
Mus musculus	RefSeq	ILMN_210284	ILMN_210284	CELSR3	NM_080437.2	NM_080437.2		107934	125719164	NM_080437.2	Celsr3	NP_536685.2	ILMN_2699498	007150204	S	9396	GTCACGAGATGCACTGGACTTAGGGGCACCCCGAGAATGGTTGAGCACAC	9	+	108751324-108751373	9qF2	Mus musculus cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila) (Celsr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mKIAA0812	mKIAA0812
Mus musculus	RefSeq	ILMN_210284	ILMN_210284	CELSR3	NM_080437.2	NM_080437.2		107934	125719164	NM_080437.2	Celsr3	NP_536685.2	ILMN_2604070	003830605	S	11412	AGTGTCCTTGCTATGTCCTAGGTTCTGTAGATGCCCGTCTCTGGGGTCCC	9	+	108755165-108755214	9qF2	Mus musculus cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila) (Celsr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mKIAA0812	mKIAA0812
Mus musculus	Riken	ILMN_206596	ILMN_206596	E030016N13RIK	ri|E030016N13|PX00205C03|AK086974|1231					AK086974	E030016N13Rik		ILMN_1235317	003130041	S	1061	TGCTGGGTTGGCACTGGAGAGTAGAGAGCATGCCTTAGTGAGGTTGGGGG										
Mus musculus	Riken	ILMN_204981	ILMN_204981	C430047O18RIK	ri|C430047O18|PX00080N11|AK049587|2231					AK049587	C430047O18Rik		ILMN_2569089	001710470	S	2158	CTGTTGCAGTGCCAACCCTTGGGAGAACGGTCTAGAAATAGTAGAGATGG										
Mus musculus	RefSeq	ILMN_206625	ILMN_245551	CENPF	NM_001081363.1	NM_001081363.1		108000	124486916	NM_001081363.1	Cenpf	NP_001074832.1	ILMN_2581479	001010594	S	296	GAAGCAGAAGGTTGAAGACGGAAAGACTGAGGGTGCAGACCTGAAAAGGG	1	-	191507803-191507843:191508824-191508832	1qH6	Mus musculus centromere protein F (Cenpf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6530404A22Rik; AI325968; Lek1; PRO1779; CENF	6530404A22Rik; AI325968; Lek1; PRO1779; CENF
Mus musculus	RefSeq	ILMN_216050	ILMN_245551	CENPF	NM_001081363.1	NM_001081363.1		108000	124486916	NM_001081363.1	Cenpf	NP_001074832.1	ILMN_2666731	000990259	S	10455	GCAATGGACTCATCTTTTGGTTGCGTGCCAAGCTGAGGGTAAAGAATGGC	1	-	191465083-191465132	1qH6	Mus musculus centromere protein F (Cenpf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISO]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6530404A22Rik; AI325968; Lek1; PRO1779; CENF	6530404A22Rik; AI325968; Lek1; PRO1779; CENF
Mus musculus	Riken	ILMN_206188	ILMN_206188	MBC2	ri|A530060I07|PX00142A13|AK080094|3410					AK080094	Mbc2		ILMN_2578237	006480136	S	3251	GAGGCCCTAAGCAGCAAGACTAGAAAGGTCAGTGGTGGATCTCAGCGGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_207079	ILMN_207079	ATP5F1	ri|C030026E11|PX00665F18|AK081249|410					AK081249	Atp5f1		ILMN_2584887	005870402	S	298	GGCTCACCCCTCGTTGTGACCTTCAGCGACACACAACCAAGTTACTGGCT						All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]		
Mus musculus	Riken	ILMN_203380	ILMN_203380	9530027E17RIK	ri|9530027E17|PX00111L11|AK035377|2282					AK035377	9530027E17Rik		ILMN_1214388	001300433	S	1999	GATTGCTGGAACAGGGCTCTGAAAACCCTTGGGACTCTCTGAGTTAGAGG										
Mus musculus	RefSeq	ILMN_221164	ILMN_221164	PLEKHB2	NM_145516.2	NM_145516.2		226971	119637809	NM_145516.2	Plekhb2	NP_663491.1	ILMN_2731769	005900201	S	2769	CCCTTTCGATGGCTTTTGCGGCGTCACTTGTACCTCAGTGAGTCCTGCGA	1	+	34935882-34935931	1qB	Mus musculus pleckstrin homology domain containing, family B (evectins) member 2 (Plekhb2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Phdc; AU018239; 2310009M15Rik; Evt2; evt-2	Phdc; AU018239; 2310009M15Rik; Evt2; evt-2
Mus musculus	RefSeq	ILMN_197817	ILMN_310744	ZKSCAN16	NM_001099323.2	NM_001099323.2		100041581	153792707	NM_001099323.2	Zkscan16	NP_001092793.1	ILMN_1234512	002060706	S	2032	GTACACACTGTGAGAAAGGTTTCCCCTCTCATTCCCGCCTCAGTCGGCAT				4qB3	Mus musculus zinc finger with KRAB and SCAN domains 16 (Zkscan16), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189301	ILMN_189301	2210418G03RIK	scl070166.7_306				51771536	XM_355173	2210418G03Rik		ILMN_1257980	004230477	S	681	GGGCACAATGCCACTGCTGAGGACAGCAAATGGAGACACCTTGGCCTTTC										
Mus musculus	MEEBO	ILMN_189301	ILMN_189301	2210418G03RIK	scl070166.7_306				51771536	XM_355173	2210418G03Rik		ILMN_2524545	006060156	S	435	GGGAGAGCACAGACTGGGCAGACAGGACCCCGGCCTGTTGTATATATGCA										
Mus musculus	RefSeq	ILMN_208939	ILMN_236988	OLFR1301	NM_146887.1	NM_146887.1		258889	22129108	NM_146887.1	Olfr1301	NP_667098.1	ILMN_2590984	006590360	S	570	GGATTCCCATATTTTGGATATTTATATGAATGTCGACTGTGGGTTTGTGG	2	+	111594977-111595026	2qE3	Mus musculus olfactory receptor 1301 (Olfr1301), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR248-5	MOR248-5
Mus musculus	Riken	ILMN_206329	ILMN_206329	RAB6IP1	ri|D330024M04|PX00191L23|AK084641|3167					AK084641	Rab6ip1		ILMN_2579299	003460040	S	2621	GCTCATTGTTCTTCCAGAGACCCATAGTTCTGTTCCAAGCTCCATGTTGG										
Mus musculus	RefSeq	ILMN_259224	ILMN_259224	MYD88	NM_010851.2	NM_010851.2		17874	31543276	NM_010851.2	Myd88	NP_034981.1	ILMN_2971767	004810286	S	1759	AGGCCTCTGTGCACGGTCTCATGGGGCATTTCACTGCTTGATGTTGAGCA	9	-	119245202-119245251	9qF3	Mus musculus myeloid differentiation primary response gene 88 (Myd88), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IGI]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence TAS]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octomer oligosaccharide [goid 2238] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IGI]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor and relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2755] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IGI]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor and relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2755] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]		
Mus musculus	RefSeq	ILMN_203073	ILMN_258332	C330021F23RIK	NM_001024728.2	NM_001024728.2		546049	141802203	NM_001024728.2	C330021F23Rik	NP_001019899.1	ILMN_1243111	007560706	S	1332	GAGTAACTTCTGCACGGTCCTCTGCCTAAGAGACACTGGGAGGCACTGAT	8	+	3584487-3584536	8qA1.1	Mus musculus RIKEN cDNA C330021F23 gene (C330021F23Rik), mRNA.				2610027C06Rik	2610027C06Rik
Mus musculus	RefSeq	ILMN_209233	ILMN_209233	OBFC2B	NM_027257.1	NM_027257.1		69917	28076936	NM_027257.1	Obfc2b	NP_081533.1	ILMN_2837156	001190075	S	763	TCCAGGCGTCTCTGCCAGAGAACAAGACAGTCTTCTATCAGGCTGCTGGC	10	-	127840774-127840823	10qD3	Mus musculus oligonucleotide/oligosaccharide-binding fold containing 2B (Obfc2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC30353; Nabp2; 2610036N15Rik	MGC30353; Nabp2; 2610036N15Rik
Mus musculus	RefSeq	ILMN_209233	ILMN_209233	OBFC2B	NM_027257.1	NM_027257.1		69917	28076936	NM_027257.1	Obfc2b	NP_081533.1	ILMN_2593852	004590646	S	527	CCGAGAACCAGAACGGAAATGGACTGAGCACCCAGCTAGGTCCTGTGGGT	10	-	127841807-127841856	10qD3	Mus musculus oligonucleotide/oligosaccharide-binding fold containing 2B (Obfc2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC30353; Nabp2; 2610036N15Rik	MGC30353; Nabp2; 2610036N15Rik
Mus musculus	RefSeq	ILMN_196503	ILMN_252024	ARHGAP19	NM_027667.2	NM_027667.2		71085	141803334	NM_027667.2	Arhgap19	NP_081943.1	ILMN_1236038	003390347	S	1612	GCCAACTCATACCCTGACCCGACTGATACCTCTAACCCCCTCACTGGATG	19	-	41844506-41844555	19qC3	Mus musculus Rho GTPase activating protein 19 (Arhgap19), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FLJ00368; 4933411B03Rik; mFLJ00368; AW546831; AI120128	FLJ00368; 4933411B03Rik; mFLJ00368; AW546831; AI120128
Mus musculus	RefSeq	ILMN_216645	ILMN_216645	CD3EAP	NM_145822.1	NM_145822.1		70333	22003859	NM_145822.1	Cd3eap	NP_665821.1	ILMN_1246695	001190328	S	1050	CCGAACATTCAGAACATGGGCTCCAGGCTGAAGTAGCTCTTGTGTCCCCC	7	-	19942440-19942489	7qA3	Mus musculus CD3E antigen, epsilon polypeptide associated protein (Cd3eap), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5736] [evidence IDA]	The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1190028F09; 2610103M17Rik; ASE-1; CAST; Ase1; PAF49	1190028F09; 2610103M17Rik; ASE-1; CAST; Ase1; PAF49
Mus musculus	MEEBO	ILMN_195885	ILMN_195885	A930014D08RIK	scl077812.1_323						A930014D08Rik		ILMN_2519658	000540315	S	6	TGTTCAAATCCTCCCCTGATGTTATCACTACACTATAATCAATAAGTACG										
Mus musculus	RefSeq	ILMN_198475	ILMN_313731	LOC622481	XR_032772.1	XR_032772.1		622481	149256013	XR_032772.1	LOC622481		ILMN_1241879	007200538	S	1141	AATGAAGAGGACGACGAAGAAGATGCAGCTGAGAAGGTAGAGGCCCTTCC				6qG3	PREDICTED: Mus musculus similar to BTB (POZ) domain containing 14B (LOC622481), misc RNA.					
Mus musculus	RefSeq	ILMN_200853	ILMN_320148	LOC100045513	XM_001474430.1	XM_001474430.1		100045513	149257117	XM_001474430.1	LOC100045513	XP_001474480.1	ILMN_1250756	004060050	S	516	CCCAGGATGGGCAGAAGGAAGCTGGAGGACTATCTGAAGACTGGGAGGCA					PREDICTED: Mus musculus hypothetical protein LOC100045513 (LOC100045513), mRNA.					
Mus musculus	RefSeq	ILMN_239550	ILMN_239550	GM1574	NM_001005422.1	NM_001005422.1		380842	53749205	NM_001005422.1	Gm1574	NP_001005422.1	ILMN_3066123	000510767	I	113	TCCCAGCAAAAGGAGGACCAGAGCCAGAGCCGCATACCCTCTCCCAGGAA	13	+	46369202-46369251	13qA5	Mus musculus gene model 1574, (NCBI) (Gm1574), mRNA.				MGC73859	MGC73859
Mus musculus	RefSeq	ILMN_239550	ILMN_239550	GM1574	NM_001005422.1	NM_001005422.1		380842	53749205	NM_001005422.1	Gm1574	NP_001005422.1	ILMN_3144232	004890762	A	1030	TGTAAAGATTTCTGCCCTGGGTTTAGGGATGGTTTTGTGAGCATCCCGGG	13	+	46395151-46395200	13qA5	Mus musculus gene model 1574, (NCBI) (Gm1574), mRNA.				MGC73859	MGC73859
Mus musculus	RefSeq	ILMN_197186	ILMN_239550	GM1574	NM_001005422.1	NM_001005422.1		380842	53749205	NM_001005422.1	Gm1574	NP_001005422.1	ILMN_1260237	002260451	S	673	AAGGCTACGGAGTGACCGGCTTCTGCCCACAGCTAACCCTTCAGACGAAG	13	+	46394794-46394843	13qA5	Mus musculus gene model 1574, (NCBI) (Gm1574), mRNA.				MGC73859	MGC73859
Mus musculus	RefSeq	ILMN_196431	ILMN_260421	1810011H11RIK	XM_922412.2	XM_922412.2		69069	94396784	XM_922412.2	1810011H11Rik	XP_927505.1	ILMN_1222269	007550458	S	1344	GGAGCAGTTACATGGTACTCATAAGCAATCGTCCGTGTGTGAGATAGAAT				14qB	PREDICTED: Mus musculus RIKEN cDNA 1810011H11 gene, transcript variant 4 (1810011H11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196431	ILMN_260421	1810011H11RIK	XM_922412.2	XM_922412.2		69069	94396784	XM_922412.2	1810011H11Rik	XP_927505.1	ILMN_1259018	006330273	S	312	CACCCCAGGACACCATCTTGCTGAAGAAGAAAAGCCCAAGAGATGCCCGG				14qB	PREDICTED: Mus musculus RIKEN cDNA 1810011H11 gene, transcript variant 4 (1810011H11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219258	ILMN_219258	CHRNE	NM_009603.1	NM_009603.1		11448	6752949	NM_009603.1	Chrne	NP_033733.1	ILMN_2706326	004860193	S	1418	GCGTTGGTTCTACTCTCATCTTCCTTGGGGGTTACTTCAACCAAGTTCCT	11	-	70428508-70428557	11qB3	Mus musculus cholinergic receptor, nicotinic, epsilon polypeptide (Chrne), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IGI]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IGI]	Acre	Acre
Mus musculus	MEEBO	ILMN_184841	ILMN_184841	SCL000981.1_40	scl000981.1_40	BC033468.1			23958518	BC033468.1	scl000981.1_40		ILMN_2422042	002650411	S	15	ATGTCAACTCCCTGTAAAGCAGCAGAATGCCCCGACTTTCCCGTGTCATC										
Mus musculus	RefSeq	ILMN_210777	ILMN_210777	OLFR1495	NM_146344.1	NM_146344.1		258341	22129613	NM_146344.1	Olfr1495	NP_666456.1	ILMN_2609074	005670136	S	873	CCCTCTGATTTACACCCTCAGGAATAAAGATATCAAAGATGCTTTGAGGA	19	+	13843706-13843755	19qA	Mus musculus olfactory receptor 1495 (Olfr1495), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR266-9	MOR266-9
Mus musculus	RefSeq	ILMN_232403	ILMN_232403	NAPB	NM_019632.1	NM_019632.1		17957	29789103	NM_019632.1	Napb	NP_062606.1	ILMN_2782402	004070553	S	3443	CCCGCAGTATCTACAAGGTGAAGGGAGGAGGATTGCTGTGAGGTTGAGGC	2	-	148386298-148386347	2qG3	Mus musculus N-ethylmaleimide sensitive fusion protein attachment protein beta (Napb), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	b-SNAP; SNARE; I47; Brp14; E161	b-SNAP; SNARE; I47; Brp14; E161
Mus musculus	RefSeq	ILMN_209570	ILMN_209570	MPND	NM_026530.5	NM_026530.5		68047	146134496	NM_026530.5	Mpnd	NP_080806.4	ILMN_2730803	004070356	S	1266	TCCCCATGGACGTAGAGATGGCGTATGTCCAAGATAGCTTCTTGACCAAC				17qD	Mus musculus MPN domain containing (Mpnd), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	E130307M08Rik	E130307M08Rik
Mus musculus	RefSeq	ILMN_222509	ILMN_329580	LOC100045505	XM_001475301.1	XM_001475301.1		100045505	149263397	XM_001475301.1	LOC100045505	XP_001475351.1	ILMN_1247874	004480575	S	493	CTGCGGCCAACTTGGGGGACAACAGTTTGCTAGGGAGTGATCGTAGGAAC					PREDICTED: Mus musculus hypothetical protein LOC100045505 (LOC100045505), mRNA.					
Mus musculus	RefSeq	ILMN_192882	ILMN_329580	LOC100045505	XM_001475301.1	XM_001475301.1		100045505	149263397	XM_001475301.1	LOC100045505	XP_001475351.1	ILMN_2492211	004920762	S	546	TCAGGTTCCTACGATCACTCCCTAGCAAACTGTTGTCCCCCAAGTTGGCC					PREDICTED: Mus musculus hypothetical protein LOC100045505 (LOC100045505), mRNA.					
Mus musculus	Riken	ILMN_206456	ILMN_206456	D130077B20RIK	ri|D130077B20|PX00186K11|AK084024|2249					AK084024	D130077B20Rik		ILMN_2580205	000730750	S	2056	CGTGTATGAGTAAATGTGTTGGGGCTGAGTCTAACACGTCTGTTCCCAGC										
Mus musculus	Riken	ILMN_205270	ILMN_205270	7030411D10RIK	ri|7030411D10|PX00312E21|AK033031|590					AK033031	7030411D10Rik		ILMN_2571290	002750280	S	266	CATGTACTGTGGTGTGTGCGGTGTGGGTGCAGTGGTCAGAGGACAAGGTG										
Mus musculus	RefSeq	ILMN_243937	ILMN_243937	FANCM	NM_178912.3	NM_178912.3		104806	54112417	NM_178912.3	Fancm	NP_849243.2	ILMN_3009719	001980341	S	7289	GTCTCTGCCTTCTTAGGCAGTGCACTGACATTGTACAGACGTGTGTGTAC	12	+	66232559-66232608	12qC1	Mus musculus Fanconi anemia, complementation group M (Fancm), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C730036B14Rik; AI427100	C730036B14Rik; AI427100
Mus musculus	RefSeq	ILMN_191375	ILMN_243937	FANCM	NM_178912.3	NM_178912.3		104806	54112417	NM_178912.3	Fancm	NP_849243.2	ILMN_2478558	007380661	S	1788	GCCGCAAACGGCAAGGCAGGATTGTCGTTATCCTCGCTGAAGGACGGGAA	12	+	66198440-66198489	12qC1	Mus musculus Fanconi anemia, complementation group M (Fancm), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C730036B14Rik; AI427100	C730036B14Rik; AI427100
Mus musculus	RefSeq	ILMN_189505	ILMN_243937	FANCM	NM_178912.3	NM_178912.3		104806	54112417	NM_178912.3	Fancm	NP_849243.2	ILMN_2714385	007160767	S	7348	CATAGTGAGTAAAGTAGATGTGAAACACATGATCTAATAAAGTCAAATGT	12	+	66232618-66232667	12qC1	Mus musculus Fanconi anemia, complementation group M (Fancm), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C730036B14Rik; AI427100	C730036B14Rik; AI427100
Mus musculus	RefSeq	ILMN_189505	ILMN_243937	FANCM	NM_178912.3	NM_178912.3		104806	54112417	NM_178912.3	Fancm	NP_849243.2	ILMN_2675206	005870392	S	7555	CTCCAGTCCCAGCAGACATACTTCATCCTACATCTGACAGAAACTTCAGA	12	+	66232825-66232874	12qC1	Mus musculus Fanconi anemia, complementation group M (Fancm), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C730036B14Rik; AI427100	C730036B14Rik; AI427100
Mus musculus	RefSeq	ILMN_200863	ILMN_200863	LOC384609	XM_357742.1	XM_357742.1			38086646	XM_357742.1	LOC384609		ILMN_1245230	002940360	S	82	CAGCCAAGGGACAATAGGGAGGATGGGGAAAGGCTTCCACTGAACCAAGG										
Mus musculus	RefSeq	ILMN_215568	ILMN_215568	ATL2	NM_019717.2	NM_019717.2		56298	119372299	NM_019717.2	Atl2	NP_062691.3	ILMN_3060766	005720139	I	257	GCAGGAGCACATACGGGATCTTAACATAGTCGTGGTGTCTGTGGCAGGAG	17	-	80275200-80275249	17qE3	Mus musculus atlastin GTPase 2 (Atl2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV334690; AA407293; 2010110I21Rik; Aip-2	AV334690; AA407293; 2010110I21Rik; Aip-2
Mus musculus	RefSeq	ILMN_189299	ILMN_215568	ATL2	NM_019717.2	NM_019717.2		56298	119372299	NM_019717.2	Atl2	NP_062691.3	ILMN_2460062	003130259	S	264	CACATACGGGATCTTAACATAGTCGTGGTGTCTGTGGCAGGAGCTTTCCG	17	-	80275193-80275242	17qE3	Mus musculus atlastin GTPase 2 (Atl2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV334690; AA407293; 2010110I21Rik; Aip-2	AV334690; AA407293; 2010110I21Rik; Aip-2
Mus musculus	RefSeq	ILMN_215568	ILMN_215568	ATL2	NM_019717.2	NM_019717.2		56298	119372299	NM_019717.2	Atl2	NP_062691.3	ILMN_3138157	002360369	A	2911	GTTCATGCTGAAAGAGGGTGGGTCAGGGTGCACCGAGTTAGAGCTCAAGG	17	-	80248292-80248341	17qE3	Mus musculus atlastin GTPase 2 (Atl2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV334690; AA407293; 2010110I21Rik; Aip-2	AV334690; AA407293; 2010110I21Rik; Aip-2
Mus musculus	MEEBO	ILMN_193008	ILMN_193008	1110039B18RIK	scl27969.13_271				31559969	NM_144525	1110039B18Rik		ILMN_2739128	001440538	S	1571	CGATCCTCCGGTCTCTTGCCTGTTGGCCAGCAAGTGTGTGCGAGACTCTC										
Mus musculus	RefSeq	ILMN_190347	ILMN_190347	ZFP423	NM_033327.2	NM_033327.2		94187	46359076	NM_033327.2	Zfp423	NP_201584.2	ILMN_3131693	002600402	A	4134	CGTGCACGGGCAGGAGGACAAAATCTACGACTGCTCGCAGTGCCCACAGA	8	-	90210353-90210402	8qC3	Mus musculus zinc finger protein 423 (Zfp423), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Roaz; Ebfaz; ataxia1; nur12; Zfp104; mKIAA0760	Roaz; Ebfaz; ataxia1; nur12; Zfp104; mKIAA0760
Mus musculus	RefSeq	ILMN_190347	ILMN_190347	ZFP423	NM_033327.2	NM_033327.2		94187	46359076	NM_033327.2	Zfp423	NP_201584.2	ILMN_2469366	004040735	S	4127	TCTTTGCCGTGCACGGGCAGGAGGACAAAATCTACGACTGCTCGCAGTGC	8	-	90210360-90210409	8qC3	Mus musculus zinc finger protein 423 (Zfp423), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Roaz; Ebfaz; ataxia1; nur12; Zfp104; mKIAA0760	Roaz; Ebfaz; ataxia1; nur12; Zfp104; mKIAA0760
Mus musculus	RefSeq	ILMN_186366	ILMN_251197	BC023814	NM_153562.3	NM_153562.3		229503	142369717	NM_153562.3	BC023814	NP_705790.2	ILMN_1220593	000650445	S	2219	TATTTCTTCAACTGCCCTACAACCAAGCCCTGCCCACATTCCTAGCCCAG	3	-	87727052-87727101	3qF1	Mus musculus cDNA sequence BC023814 (BC023814), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC38548	MGC38548
Mus musculus	MEEBO	ILMN_221817	ILMN_221817	4930524O08RIK	scl36635.7.1_78				51765042	XM_489291	4930524O08Rik		ILMN_2740845	004920717	S	1328	ATTTTGCACTCTACGAGATAACTGGTACACAATCATCATTACACTGTCAG										
Mus musculus	RefSeq	ILMN_217982	ILMN_217982	OLFR954	NM_146331.1	NM_146331.1		258328	22129637	NM_146331.1	Olfr954	NP_666443.1	ILMN_2690093	002100519	S	772	CAGCATTTGTGTACTTACAGCCATCACGAGTAAGTTCAATAGACCAAGGG	9	+	39269789-39269838	9qA5.1	Mus musculus olfactory receptor 954 (Olfr954), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-42; MOR171-53	MOR171-42; MOR171-53
Mus musculus	RefSeq	ILMN_201168	ILMN_201168	LOC384884	XM_357915.1	XM_357915.1			38089603	XM_357915.1	LOC384884		ILMN_1228430	002760020	S	608	GCTGGCACTTGGCTGAACGTGTGAATCTTGGGTACGGAATCCAGAGAACC										
Mus musculus	RefSeq	ILMN_200624	ILMN_200624	LOC383407	XM_357035.1	XM_357035.1			38084505	XM_357035.1	LOC383407		ILMN_2539422	004490379	S	3	GGACATGGTTGAGGAGGTGTCGTCTTCGTCCCTGGCCCCAGGTAAGAGTA										
Mus musculus	RefSeq	ILMN_219089	ILMN_219089	CUL4A	NM_146207.1	NM_146207.1		99375	22164789	NM_146207.1	Cul4a	NP_666319.1	ILMN_2735174	004540220	S	182	AACTACACTCAGGACACGTGGCGGAAGCTTCACGAAGCGGTCAAGGCCAT	8	+	13106214-13106263	8qA1.1	Mus musculus cullin 4A (Cul4a), mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	2810470J21Rik; MGC36573; AW495282	2810470J21Rik; MGC36573; AW495282
Mus musculus	RefSeq	ILMN_219089	ILMN_219089	CUL4A	NM_146207.1	NM_146207.1		99375	22164789	NM_146207.1	Cul4a	NP_666319.1	ILMN_2704119	002600296	S	1417	GGTGGACGCGGAGAAGTCCATGCTGTCGAAGCTCAAGCACGAGTGCGGAG	8	+	13136203-13136243:13136336-13136344	8qA1.1	Mus musculus cullin 4A (Cul4a), mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	2810470J21Rik; MGC36573; AW495282	2810470J21Rik; MGC36573; AW495282
Mus musculus	RefSeq	ILMN_219089	ILMN_219089	CUL4A	NM_146207.1	NM_146207.1		99375	22164789	NM_146207.1	Cul4a	NP_666319.1	ILMN_2740520	004670220	S	3223	TTACAAAGTAGCATGTTTCATTTTGATTAAAAGCTACCAAAGGAATTTTG	8	+	13147557-13147606	8qA1.1	Mus musculus cullin 4A (Cul4a), mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	2810470J21Rik; MGC36573; AW495282	2810470J21Rik; MGC36573; AW495282
Mus musculus	RefSeq	ILMN_219089	ILMN_219089	CUL4A	NM_146207.1	NM_146207.1		99375	22164789	NM_146207.1	Cul4a	NP_666319.1	ILMN_2956895	004730682	S	3127	TACAGGTGGGTTGGGCAGCGAGAACGAGGCTCCATAGTGGTGTTGGCATG	8	+	13147461-13147510	8qA1.1	Mus musculus cullin 4A (Cul4a), mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	2810470J21Rik; MGC36573; AW495282	2810470J21Rik; MGC36573; AW495282
Mus musculus	Riken	ILMN_201679	ILMN_201679	AKL3L-PENDING	ri|1810027K10|R000023O11|AK007618|917					AK007618	Akl3l-pending		ILMN_1234250	002450646	S	790	GTCTGCAACTCCAGGACATCCAACGACCTCTTTTGACCTTGGCAGGTGTC										
Mus musculus	RefSeq	ILMN_207486	ILMN_207486	6720460I06RIK	XM_149504.1	XM_149504.1			20848188	XM_149504.1	6720460I06Rik		ILMN_1260529	000830327	I	586	GTCTGGGAGCCACCTGTGTGGGAGCTGGGCTTGAACTCAGTCTTCTGGAA										
Mus musculus	RefSeq	ILMN_216046	ILMN_216046	AACS	NM_030210.1	NM_030210.1		78894	21313519	NM_030210.1	Aacs	NP_084486.1	ILMN_1253601	007650468	S	2901	GCCCCGTGCTCCCTCCTAATAGTTCCTGGGCTCTTTCTATTGTGACTGTC	5	+	125997501-125997550	5qG1.1	Mus musculus acetoacetyl-CoA synthetase (Aacs), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: ATP + acetoacetate + CoA = AMP + diphosphate + acetoacetyl-CoA [goid 30729] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	SUR5; 2210408B16Rik	SUR5; 2210408B16Rik
Mus musculus	RefSeq	ILMN_211305	ILMN_211305	CSRP2BP	NM_181417.2	NM_181417.2		228714	31340880	NM_181417.2	Csrp2bp	NP_852082.1	ILMN_2614477	006480392	S	28	TGTCGAGGAGTTCGAAGGCAGTGCTGGGCCTCTCGGTGCTGCTGACGGCG	2	+	144194798-144194847	2qG1	Mus musculus cysteine and glycine-rich protein 2 binding protein (Csrp2bp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2510008M08Rik; D2Wsu131e; AU023459; D2Ertd473e; E430020F17	2510008M08Rik; D2Wsu131e; AU023459; D2Ertd473e; E430020F17
Mus musculus	Riken	ILMN_205296	ILMN_205296	IQGAP1	ri|4833436C10|PX00313L19|AK029434|2292					AK029434	Iqgap1		ILMN_2571492	000520148	S	2058	GGACAGGAACTCAAACATGAACTTGGAGGCAGGCACTGAAGAAGAGGTCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The area of a motile cell closest to the direction of movement [goid 31252] [evidence IGI]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IGI]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Ras superfamily [goid 5099] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217405	ILMN_217405	9330102E08RIK	scl28369.3.1_252				51712669	XM_489154	9330102E08Rik		ILMN_2682826	006590221	S	3697	CTTTCCCATGGGGCCAGAGCCCGAGCAGTAGACTCGACCACACTTTTTAT										
Mus musculus	MEEBO	ILMN_186201	ILMN_186201	ZWINT	scl38781.10_357	NM_025635.1			21326439	NM_025635.1	Zwint		ILMN_2433482	004180220	S	18	CTATTGAATCCAGAATGTGAATCCATGCCTTTGTGACTGTGACCTCACTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]			
Mus musculus	RefSeq	ILMN_220553	ILMN_220553	MOSPD1	NM_027409.3	NM_027409.3		70380	146141144	NM_027409.3	Mospd1	NP_081685.1	ILMN_2727258	007330593	S	1396	CACAACAGACTGTGGTTCAAACAACAGGCACCTCACAGAAGTAGATTGGT				XqA5	Mus musculus motile sperm domain containing 1 (Mospd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC103065; 1810018L05Rik	MGC103065; 1810018L05Rik
Mus musculus	RefSeq	ILMN_214384	ILMN_235279	GPR115	XM_894986.3	XM_894986.3		78249	149268852	XM_894986.3	Gpr115	XP_900079.1	ILMN_2647451	004070228	S	2755	GGTGGGGTTGGAGATCAAACATGAATGATAATATTGTATCTACTTTGCAG	17	-	42794095-42794144	17qB3	PREDICTED: Mus musculus G protein-coupled receptor 115, transcript variant 2 (Gpr115), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_226163	ILMN_226163	ZFP748	NM_001035231.2	NM_001035231.2		212276	118131029	NM_001035231.2	Zfp748	NP_001030308.1	ILMN_3021928	002320187	I	4479	GGGCTGTAGTGAAATCCTAAGATGGTGTGTTGTGGGGTCCCTTTGTAGTG	13	-	67639663-67639712	13qB3	Mus musculus zinc finger protein 748 (Zfp748), transcript variant 1, mRNA. XM_900984 XM_900991 XM_900994	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mszf54; MGC60742; KIAA4236; BC055310; mKIAA4236; 2610014M12Rik	mszf54; MGC60742; KIAA4236; BC055310; mKIAA4236; 2610014M12Rik
Mus musculus	RefSeq	ILMN_215629	ILMN_215629	POMGNT1	NM_026651.1	NM_026651.1		68273	22267451	NM_026651.1	Pomgnt1	NP_080927.1	ILMN_2661786	002600209	S	747	GCGAGAAACATTCTAAATCTCCTGCCCTCTCCTCCTGGGGTGACCCAGTC	4	+	115826459-115826508	4qD1	Mus musculus protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase (Pomgnt1), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISO]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence ISO]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IMP]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 [goid 3827] [evidence IEA]; Catalysis of the reaction: beta-D-galactosyl-1,3-(N-acetyl-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R + UDP-N-acetyl-D-glucosamine = N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R + UDP [goid 47223] [evidence ISO]	0610016I07Rik; 4930467B06Rik; RP23-319H15.3	0610016I07Rik; 4930467B06Rik; RP23-319H15.3
Mus musculus	RefSeq	ILMN_204980	ILMN_240024	MFN2	XM_001002419.1	XM_001002419.1		170731	94372938	XM_001002419.1	Mfn2	XP_001002419.1	ILMN_1257220	006580678	S	2178	GTCTACTACTGCTGGGGTCCTGAGGGCAGAAGCCATTTGAGGTTGCCATC				4qE2	PREDICTED: Mus musculus mitofusin 2, transcript variant 9 (Mfn2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [evidence IMP]; The initial formation of a blastocyst from a solid ball of cells known as a morula [goid 1825] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188552	ILMN_188552	MJ-250-14_46	MJ-250-14_46						MJ-250-14_46		ILMN_2453643	006520689	S	18	GTTGAACTTCCACTGATTTTTAAATATAGGGGAGCAATGAGCGGAGAAGA										
Mus musculus	RefSeq	ILMN_214985	ILMN_214985	OLFR1095	NM_146730.2	NM_146730.2		258725	122056734	NM_146730.2	Olfr1095	NP_666941.2	ILMN_1251629	004070315	S	644	CCTATGCTTTTATCCTGTTGTCAATCCTGAAGATGAATTCAGCTGAAGGG	2	-	86691160-86691209	2qD	Mus musculus olfactory receptor 1095 (Olfr1095), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR179-1	MOR179-1
Mus musculus	RefSeq	ILMN_211113	ILMN_211113	COL4A3	NM_007734.2	NM_007734.2		12828	145699100	NM_007734.2	Col4a3	NP_031760.2	ILMN_1213850	006590019	S	7435	GGCCAGTGTAGGAGTAGCAGCTGTGGCATTCAGGAGCTTGTCCTAATTGC				1qC5	Mus musculus collagen, type IV, alpha 3 (Col4a3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]	tumstatin; alpha3(IV); [a]3(IV)	tumstatin; alpha3(IV); [a]3(IV)
Mus musculus	RefSeq	ILMN_200315	ILMN_200315	LOC386208	XM_359119.1	XM_359119.1			38081290	XM_359119.1	LOC386208		ILMN_1233173	006960725	S	261	GGGCTACACAGCTTCCTGTTCCCCAAACACATACCCAAAGAAACTAAGGG										
Mus musculus	RefSeq	ILMN_197991	ILMN_197991	LOC242987	XM_144331.3	XM_144331.3			38080005	XM_144331.3	LOC242987		ILMN_2530093	002480743	S	1768	GATTTCACAGAGAAAGCTGTCCTCCACATCCGGCTCAGGTATGGTGGCAC										
Mus musculus	RefSeq	ILMN_216416	ILMN_312811	LOC100046136	XM_001476489.1	XM_001476489.1		100046136	149269277	XM_001476489.1	LOC100046136	XP_001476539.1	ILMN_1252389	004250452	S	764	CGGAAACTGGTGTCTTTCCCCTTGCTGTTCTTCAACCCCTCTCTTTGGCC					PREDICTED: Mus musculus hypothetical protein LOC100046136 (LOC100046136), mRNA.					
Mus musculus	Riken	ILMN_202946	ILMN_202946	A930018I09RIK	ri|A930018I09|PX00066C02|AK044519|1531					AK044519	A930018I09Rik		ILMN_1242241	007150307	S	1057	GGTGGCGTGCACCTTTAATCCTGATACTTGGTTTATGGGAGCTCCAGGAC										
Mus musculus	RefSeq	ILMN_219136	ILMN_219136	6330409N04RIK	NM_025697.1	NM_025697.1		66674	27228992	NM_025697.1	6330409N04Rik	NP_079973.1	ILMN_2930850	006330132	S	1415	GACCATCAAGATGAGCAAGTAGTGATTGCTCGTAGTATACTAGCAAACTC	14	-	60488640-60488689	14qD1	Mus musculus RIKEN cDNA 6330409N04 gene (6330409N04Rik), mRNA.					
Mus musculus	Riken	ILMN_204601	ILMN_204601	4932411G08RIK	ri|4932411G08|PX00017J15|AK029965|2917					AK029965	4932411G08Rik		ILMN_2566237	004220035	S	1896	GGTTGGTGGTCCAGTCTCTGATAGCCTCAAGGGTCCAGGTTAGTTGACTG										
Mus musculus	RefSeq	ILMN_210874	ILMN_254872	PDCD11	NM_011053.2	NM_011053.2		18572	54607127	NM_011053.2	Pdcd11	NP_035183.2	ILMN_2610066	002120400	S	5755	CCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACTGCTTTAGT	19	+	47205347-47205396	19qC3	Mus musculus programmed cell death 11 (Pdcd11), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]		mKIAA0185; Pdcd7; ALG-4; 1110021I22Rik	mKIAA0185; Pdcd7; ALG-4; 1110021I22Rik
Mus musculus	Riken	ILMN_203274	ILMN_203274	ZIC3	ri|9430037B07|PX00108F14|AK034780|1952					AK034780	Zic3		ILMN_1243639	005900326	S	1762	CGAGGGACCCTGTTCAGAAGCCAGTAGGCACAATTCTCATGCACTGTTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193660	ILMN_249677	MFAP3L	NM_027756.3	NM_027756.3		71306	118130394	NM_027756.3	Mfap3l	NP_082032.1	ILMN_1212619	005860446	S	1863	GACGTTCTGAGTTCAGGAGCCCTGTCTAGTGCGTACTGCATTGCTTTTCC	8	+	63151073-63151122	8qB3.1	Mus musculus microfibrillar-associated protein 3-like (Mfap3l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			NYD-sp9; 5430405D20Rik; AW125052; AI461995; 4933428A15Rik; mKIAA0626	NYD-sp9; 5430405D20Rik; AW125052; AI461995; 4933428A15Rik; mKIAA0626
Mus musculus	RefSeq	ILMN_193660	ILMN_249677	MFAP3L	NM_027756.3	NM_027756.3		71306	118130394	NM_027756.3	Mfap3l	NP_082032.1	ILMN_1220393	004780452	S	342	GTGTTTACCACCTTCTGTGCCCTTCTTAATCCTAGTATCCACTCTAGCCA	8	+	63135418-63135467	8qB3.1	Mus musculus microfibrillar-associated protein 3-like (Mfap3l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			NYD-sp9; 5430405D20Rik; AW125052; AI461995; 4933428A15Rik; mKIAA0626	NYD-sp9; 5430405D20Rik; AW125052; AI461995; 4933428A15Rik; mKIAA0626
Mus musculus	MEEBO	ILMN_190079	ILMN_190079	A230087F16RIK	scl00320738.1_113						A230087F16Rik		ILMN_1228212	003800484	S	7	ACCCTCTGCCTTCTGTGGCACTGGGATGGCGCACTTTAGTCTTTGTAGGG										
Mus musculus	RefSeq	ILMN_223766	ILMN_223766	SIAH1A	NM_009172.1	NM_009172.1		20437	6677946	NM_009172.1	Siah1a	NP_033198.1	ILMN_2768831	005900445	S	1755	GGAGCCACACGTCAGGTCAGGCTGACTCTTAGAAAGGGTAGGTTAGGGAG	8	-	89248069-89248118	8qC3	Mus musculus seven in absentia 1A (Siah1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Sinh1a; AA982064; AI853500	Sinh1a; AA982064; AI853500
Mus musculus	RefSeq	ILMN_191337	ILMN_191337	VMN2R89	NM_009487.1	NM_009487.1		22301	6678530	NM_009487.1	Vmn2r89	NP_033513.1	ILMN_3151786	003310592	A	2344	CAGCACCAGGGGGAAGGTCATGGTGGTTGTGGAGGTTTTCTCAATCTTGG	14	+	52080370-52080419	14qC1	Mus musculus vomeronasal 2, receptor 89 (Vmn2r89), transcript variant 2, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	V2r11	V2r11
Mus musculus	RefSeq	ILMN_191337	ILMN_191337	VMN2R89	NM_009487.1	NM_009487.1		22301	6678530	NM_009487.1	Vmn2r89	NP_033513.1	ILMN_2478249	002260477	S	19	AGCTATATACCTTGTTTTCCAAAGAGTCAACAACTTCATATATCTGATGA	14	+	52071655-52071704	14qC1	Mus musculus vomeronasal 2, receptor 89 (Vmn2r89), transcript variant 2, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	V2r11	V2r11
Mus musculus	RefSeq	ILMN_191337	ILMN_191337	VMN2R89	NM_009487.1	NM_009487.1		22301	6678530	NM_009487.1	Vmn2r89	NP_033513.1	ILMN_3072986	004230180	I	1393	CCAGGGTATTTACGAACCCGGTTGGAGAACTGGTGAACATGAAGCATAGG	14	+	52077052-52077101	14qC1	Mus musculus vomeronasal 2, receptor 89 (Vmn2r89), transcript variant 2, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	V2r11	V2r11
Mus musculus	RefSeq	ILMN_221247	ILMN_221247	SUPT3H	NM_178652.2	NM_178652.2		109115	141803014	NM_178652.2	Supt3h	NP_848767.1	ILMN_1213872	000540608	S	1410	CGAAGAGGGAGTGGTTCACCGAGGTCATTCTTGCCTGTCCTGCCGGAAAA	17	+	45256160-45256209	17qB3	Mus musculus suppressor of Ty 3 homolog (S. cerevisiae) (Supt3h), mRNA.				AI315192; 2310066G22Rik; SPT3L; SPT3	AI315192; 2310066G22Rik; SPT3L; SPT3
Mus musculus	MEEBO	ILMN_223947	ILMN_223947	FOXD2	scl23975.1.1_325				6679838	NM_008593	Foxd2		ILMN_2772051	006350220	S	1529	TTTTGACCGCACCGGGCTCGGGCCAGTTAGGCCCTCACTCCTTAACCTCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221758	ILMN_221758	4930427A07RIK	NM_134041.2	NM_134041.2		104732	142364664	NM_134041.2	4930427A07Rik	NP_598802.1	ILMN_1217337	003870372	S	2361	TTCCGGCTCTGGTCCAGGGCATGTGGGAACTTGACTGTCTGGCTCCTCAT	12	+	114395818-114395867	12qF1	Mus musculus RIKEN cDNA 4930427A07 gene (4930427A07Rik), mRNA.				AA536649; FLJ00116; mFLJ00116	AA536649; FLJ00116; mFLJ00116
Mus musculus	RefSeq	ILMN_209775	ILMN_209775	REXO2	NM_024233.3	NM_024233.3		104444	141802136	NM_024233.3	Rexo2	NP_077195.2	ILMN_2736430	005870538	S	657	TTAGTGAAAGCATCAAAGAGCTTCAGTTTTACCGAAATAACATCTTCAAG	9	-	48276987-48277036	9qA5.3	Mus musculus REX2, RNA exonuclease 2 homolog (S. cerevisiae) (Rexo2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence ISA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence ISA]	Sfn; Smfn; 1810038D15Rik; AW107347	Sfn; Smfn; 1810038D15Rik; AW107347
Mus musculus	RefSeq	ILMN_209775	ILMN_209775	REXO2	NM_024233.3	NM_024233.3		104444	141802136	NM_024233.3	Rexo2	NP_077195.2	ILMN_1249765	004260477	S	224	GAGAAGGATCAGATTATTGAGATGGCCTGCCTGATAACTGACTCTGATCT	9	-	48287430-48287479	9qA5.3	Mus musculus REX2, RNA exonuclease 2 homolog (S. cerevisiae) (Rexo2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence ISA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence ISA]	Sfn; Smfn; 1810038D15Rik; AW107347	Sfn; Smfn; 1810038D15Rik; AW107347
Mus musculus	RefSeq	ILMN_193626	ILMN_232739	MEGF11	NM_172522.2	NM_172522.2		214058	142362961	NM_172522.2	Megf11	NP_766110.1	ILMN_2618651	000540241	S	2646	GCAGCCATGCCCAGTGCTTTTCCAATGCCAGCTACCACACACTGGCGTGT	9	+	64543186-64543235	9qC	Mus musculus multiple EGF-like-domains 11 (Megf11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			2410080H04Rik; D130061K05	2410080H04Rik; D130061K05
Mus musculus	RefSeq	ILMN_193626	ILMN_232739	MEGF11	NM_172522.2	NM_172522.2		214058	142362961	NM_172522.2	Megf11	NP_766110.1	ILMN_2706915	006100192	S	2858	CCCGAGGACTTCTACATTGAACTTAGACACCTCAGCCGCCATGCTGAGCC	9	+	64545655-64545704	9qC	Mus musculus multiple EGF-like-domains 11 (Megf11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			2410080H04Rik; D130061K05	2410080H04Rik; D130061K05
Mus musculus	RefSeq	ILMN_193626	ILMN_232739	MEGF11	NM_172522.2	NM_172522.2		214058	142362961	NM_172522.2	Megf11	NP_766110.1	ILMN_2605165	000360427	S	3366	GGCCCTAGGTTTAAATGCTGGGACACGTGAGCTAGGCAGGGAGCTCTGGA	9	+	64548560-64548609	9qC	Mus musculus multiple EGF-like-domains 11 (Megf11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			2410080H04Rik; D130061K05	2410080H04Rik; D130061K05
Mus musculus	RefSeq	ILMN_190575	ILMN_249550	PLLP	NM_026385.4	NM_026385.4		67801	142382577	NM_026385.4	Pllp	NP_080661.1	ILMN_1249529	000430278	S	1786	CCTTGTCTTGTCCATTGGAGGACGCACATAGCATCTGTCCAAGTTTGTGG	8	-	97198848-97198897	8qC5	Mus musculus plasma membrane proteolipid (Pllp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	0610010I06Rik; Tm4sf11; Plapi; AV001002	0610010I06Rik; Tm4sf11; Plapi; AV001002
Mus musculus	MEEBO	ILMN_194025	ILMN_194025	RPS24	scl46558.3_0				46519155	NM_011297	Rps24		ILMN_2502673	001410746	S	7	TGAGTTTTTCTCTATAAAGGCTGTATTTTATCAATTTGTATGGGTCCATG						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISO]		
Mus musculus	RefSeq	ILMN_200785	ILMN_200785	LOC385338	XM_358199.1	XM_358199.1			38086092	XM_358199.1	LOC385338		ILMN_2539998	004640180	S	88	TACTTCTCTAAGGAAGAGTGGAAAAAGCTGAGCCGTTCAGAGAAGATCAC										
Mus musculus	RefSeq	ILMN_199849	ILMN_199849	LOC383084	XM_356855.1	XM_356855.1			38078005	XM_356855.1	LOC383084		ILMN_2536705	007570450	S	639	ACGGGATCTCTTTGTTACCCTTCCACAGAAGACGAAGGCTCAGGTCCCCA										
Mus musculus	MEEBO	ILMN_195262	ILMN_195262	TRGC4_AF021335_T_CELL_RECEPTOR_GAMMA_CONSTANT_4_206	TRGC4_AF021335_T_cell_receptor_gamma_constant_4_206						TRGC4_AF021335_T_cell_receptor_gamma_constant_4_206		ILMN_2513984	004280209	S	13	GCTGACGGTGACTGAAGATTCAATGGCTAAAGAACATAGTTGCATTGTCA										
Mus musculus	RefSeq	ILMN_217058	ILMN_217058	CNGA1	NM_007723.2	NM_007723.2		12788	112181172	NM_007723.2	Cnga1	NP_031749.2	ILMN_1219994	007040601	S	1909	GGCTGGCAACCGAAGAACAGCCAACATTAAGAGCATCGGCTACTCGGACC	5	-	72995715-72995764	5qC3.2	Mus musculus cyclic nucleotide gated channel alpha 1 (Cnga1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Cncg	Cncg
Mus musculus	Riken	ILMN_203140	ILMN_203140	5330432E05RIK	ri|5330432E05|PX00054O06|AK030563|3176					AK030563	5330432E05Rik		ILMN_1219379	003830133	S	3097	GCTGTAAGAAGGAGGGGAAGAAGAAGCTGCTGGGGAGAGAGCTGTAAGAG										
Mus musculus	RefSeq	ILMN_218762	ILMN_218762	DDX19A	NM_007916.1	NM_007916.1		13680	6681290	NM_007916.1	Ddx19a	NP_031942.1	ILMN_1233412	004010035	S	2223	CAGCAAATCTCAGACTCGAGGGTCATAGACAATCCCATTGAAGATGGAGG	8	-	113499171-113499220	8qE1	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a (Ddx19a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	Eif4a-rs1; Ddx19; DBP5	Eif4a-rs1; Ddx19; DBP5
Mus musculus	RefSeq	ILMN_220000	ILMN_220000	2810433K01RIK	NM_025581.3	NM_025581.3		66468	142367006	NM_025581.3	2810433K01Rik	NP_079857.2	ILMN_1243845	006290161	S	1846	AAGCCATGACTAGGAAGTTGCAGTTTGGAGCCATTCTCCTGCTCCCGGGG	18	-	74355547-74355596	18qE2	Mus musculus RIKEN cDNA 2810433K01 gene (2810433K01Rik), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		AV117428	AV117428
Mus musculus	MEEBO	ILMN_222792	ILMN_222792	9330175E14RIK	scl00320377.1_171	NM_177146.2			31342909	NM_177146.2	9330175E14Rik		ILMN_2754891	004570139	S	4178	GCATCATAAGTATGGCCTCAGAAAAGATATCATACTGCTTCAACTCCCAG										
Mus musculus	Riken	ILMN_206917	ILMN_206917	A530029H06RIK	ri|A530029H06|PX00140B10|AK079965|471					AK079965	A530029H06Rik		ILMN_1221345	004150156	S	6	GGCTGGGCAGACATGGCAGTCTGGTAATCGTTGTAATCAGTCCCTGGAAG										
Mus musculus	MEEBO	ILMN_192379	ILMN_192379	A330042I21RIK	scl23339.1_127						A330042I21Rik		ILMN_2487554	002320181	S	20	CCCAAGGGAGGGCTCTGTGACGTCTGGAGTCTCAACAGTTTGGTCTTTGC										
Mus musculus	RefSeq	ILMN_214765	ILMN_255565	OLFR1340	NM_146304.1	NM_146304.1		258301	22129682	NM_146304.1	Olfr1340	NP_666416.1	ILMN_2651681	004490653	S	791	GACCTGGCTCTGAAGCCTCCCCAGAAGATGATAAGAAGCTGGCCTTGTTC	4	+	118399644-118399693	4qD2.1	Mus musculus olfactory receptor 1340 (Olfr1340), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123648; MGC123701; MOR258-6	MGC123648; MGC123701; MOR258-6
Mus musculus	RefSeq	ILMN_199054	ILMN_199054	LOC380647	XM_358395.1	XM_358395.1			38090657	XM_358395.1	LOC380647		ILMN_1240159	002350500	S	470	CCCAGCCCCAAGCCCTGGACAAGCCTTCAGCTTAAAAAGGTCCAGATTGG										
Mus musculus	RefSeq	ILMN_194207	ILMN_251334	SPAG4	NM_139151.4	NM_139151.4		245865	151301070	NM_139151.4	Spag4	NP_631890.3	ILMN_2504368	002230661	S	1387	GCTTCACGTGCTTATATCGCGTCCGTGCTCATGGTGTGCGGACCTCAGAG				2qH1	Mus musculus sperm associated antigen 4 (Spag4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]			1700041K21Rik; mKIAA4118; MNCb-0953; KIAA4118; MGC130280	1700041K21Rik; mKIAA4118; MNCb-0953; KIAA4118; MGC130280
Mus musculus	RefSeq	ILMN_194207	ILMN_251334	SPAG4	NM_139151.4	NM_139151.4		245865	151301070	NM_139151.4	Spag4	NP_631890.3	ILMN_2659447	004920541	S	815	GGCAGAACTGAATAAACTCCACAAGGAGGTGTCCAGCGTTCGTGCAGCCC				2qH1	Mus musculus sperm associated antigen 4 (Spag4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]			1700041K21Rik; mKIAA4118; MNCb-0953; KIAA4118; MGC130280	1700041K21Rik; mKIAA4118; MNCb-0953; KIAA4118; MGC130280
Mus musculus	RefSeq	ILMN_199698	ILMN_199698	LOC383834	XM_357283.1	XM_357283.1			38076236	XM_357283.1	LOC383834		ILMN_1248538	005050291	S	319	GGTGACAGAAAGAATCAGAAGAGCGCCAAAGGGAAAGGCAACCTGGGCTC										
Mus musculus	Riken	ILMN_203462	ILMN_203462	4832415C19RIK	ri|4832415C19|PX00102H18|AK029290|2770					AK029290	4832415C19Rik		ILMN_1259492	003460673	S	2497	CTCAGGAGACTGAGGTGGGATTGAGGTCTGGGCTTCAGTGTCAAACCCTG										
Mus musculus	RefSeq	ILMN_187098	ILMN_242552	LOC668047	XM_001001100.1	XM_001001100.1		668047	94380052	XM_001001100.1	LOC668047	XP_001001100.1	ILMN_2481836	006040369	S	2474	ACGCCTAACTACTGAGGTTCATACTGCTTTGGTTGTCTTTGATGGCTGTG	7	+	25783030-25783079	7qA3	PREDICTED: Mus musculus similar to ring finger protein 170 (LOC668047), mRNA.					
Mus musculus	RefSeq	ILMN_212436	ILMN_251690	BC030863	XM_979045.1	XM_979045.1		194404	94378196	XM_979045.1	BC030863	XP_984139.1	ILMN_2626428	005340706	S	6230	CTCTGCCTCCAACAGCCATCCTTAACGTAATTTTGACCAGCAGATGTAGA	6	-	120878790-120878839		PREDICTED: Mus musculus cDNA sequence BC030863 (BC030863), mRNA.					
Mus musculus	RefSeq	ILMN_212000	ILMN_212000	CSN3	NM_007786.2	NM_007786.2		12994	75677411	NM_007786.2	Csn3	NP_031812.2	ILMN_2854811	002320634	S	555	CCCCTGAGACTACTACAGTCCCAGTGTCCTCAACTGCAGCATAAAACACT	5	+	89004701-89004743:89004744-89004750	5qE1	Mus musculus casein kappa (Csn3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Csnk; CSN10; AW208918	Csnk; CSN10; AW208918
Mus musculus	MEEBO	ILMN_211364	ILMN_211364	2210012G02RIK	scl24032.3.148_1	NM_025617.1			13385071	NM_025617.1	2210012G02Rik		ILMN_2751248	004890753	S	1141	TAGACAGCTCCGAAGCCTCTCAGAACTCCCGTCTGCTCTCTTTGCTCTAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191196	ILMN_236248	2610109H07RIK	NM_027426.2	NM_027426.2		70433	142367513	NM_027426.2	2610109H07Rik	NP_081702.1	ILMN_1220583	005870039	S	2877	GTTACGTGCTAACTTGGTCTGGGCTTCAAAGTCTCCAAAGCTCCCCCAGG	4	-	147474819-147474868	4qE2	Mus musculus RIKEN cDNA 2610109H07 gene (2610109H07Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_221243	ILMN_221243	GTSF1L	NM_026630.2	NM_026630.2		68236	141802654	NM_026630.2	Gtsf1l	NP_080906.1	ILMN_2732954	002760470	S	163	GGCTGTTTTCTGGCTTTCTCTGCATAGCGATTGCTGACAGAACGTGAGTG	2	-	162913434-162913483	2qH2	Mus musculus gametocyte specific factor 1-like (Gtsf1l), mRNA.				RP23-335N12.6	RP23-335N12.6
Mus musculus	RefSeq	ILMN_187412	ILMN_237694	PCDHB13	NM_053138.2	NM_053138.2		93884	148728173	NM_053138.2	Pcdhb13	NP_444368.1	ILMN_2443913	002350110	S	3608	TATAGTTTGTGAACATTGTGTAAGAAGAGTATGATCTTTGAGCATCAAGA				18qB3	Mus musculus protocadherin beta 13 (Pcdhb13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcdbh6; PcdhbM	Pcdbh6; PcdhbM
Mus musculus	RefSeq	ILMN_212897	ILMN_212897	DUT	NM_023595.5	NM_023595.5		110074	141802974	NM_023595.5	Dut	NP_076084.2	ILMN_1227159	005700279	S	1377	GGCATGCCATCCTTCAAATGATAATGCTATCTGCGGCTGGACATTTTGGC	2	+	125084024-125084073	2qF1	Mus musculus deoxyuridine triphosphatase (Dut), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the reaction: dUTP + H2O = dUMP + diphosphate [goid 4170] [evidence IEA]	5031412I06Rik; dUTPase; D2Bwg0749e; 5133400F09Rik; Dutp	5031412I06Rik; dUTPase; D2Bwg0749e; 5133400F09Rik; Dutp
Mus musculus	RefSeq	ILMN_196398	ILMN_212897	DUT	NM_023595.5	NM_023595.5		110074	141802974	NM_023595.5	Dut	NP_076084.2	ILMN_2523963	001170204	S	164	GCCTATGATTATACAATATCACCCATGGAGAAAGCCATCGTGAAGACAGA	2	+	125074903-125074952	2qF1	Mus musculus deoxyuridine triphosphatase (Dut), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the reaction: dUTP + H2O = dUMP + diphosphate [goid 4170] [evidence IEA]	5031412I06Rik; dUTPase; D2Bwg0749e; 5133400F09Rik; Dutp	5031412I06Rik; dUTPase; D2Bwg0749e; 5133400F09Rik; Dutp
Mus musculus	RefSeq	ILMN_187960	ILMN_252250	HSPBAP1	NM_175111.3	NM_175111.3		66667	120587016	NM_175111.3	Hspbap1	NP_780320.2	ILMN_1259025	000770315	S	3999	TCGTCCAATACTGAAGGACAAGTCAGTAGTGCTCACATACCCACGTGGTG	16	+	35827941-35827990	16qB3	Mus musculus Hspb associated protein 1 (Hspbap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			3830421G21Rik	3830421G21Rik
Mus musculus	RefSeq	ILMN_187960	ILMN_252250	HSPBAP1	NM_175111.3	NM_175111.3		66667	120587016	NM_175111.3	Hspbap1	NP_780320.2	ILMN_1243903	005490470	S	1461	GCTGGACTGCCTAGTTAATCCACAAGTAACCAGGATGGTGGCCCAGCTTT	16	+	35825403-35825452	16qB3	Mus musculus Hspb associated protein 1 (Hspbap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			3830421G21Rik	3830421G21Rik
Mus musculus	RefSeq	ILMN_193531	ILMN_193531	V1RD18	NM_207618.1	NM_207618.1		404287	46518531	NM_207618.1	V1rd18	NP_997501.1	ILMN_2996714	002360209	S	281	TCACTCGCCTCGTGGCAAGAAGCACAAACTTGTGTTCAACTTGTGTTCTG	7	+	24788410-24788459	7qA3	Mus musculus vomeronasal 1 receptor, D18 (V1rd18), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC130062; MGC130061	MGC130062; MGC130061
Mus musculus	RefSeq	ILMN_221266	ILMN_233010	6430514L14RIK	NM_029784.2	NM_029784.2		76886	118130670	NM_029784.2	6430514L14Rik	NP_084060.1	ILMN_2733204	007570576	S	2611	GTCCCGGCACCTTTGCAGGCGTTTTATTTTCAGTTGCCATGTTTGAGTCA	9	-	69937339-69937388	9qD	Mus musculus RIKEN cDNA 6430514L14 gene (6430514L14Rik), mRNA.					
Mus musculus	MEEBO	ILMN_190791	ILMN_190791	GMEB1	scl23739.12_89				9937989	NM_020273	Gmeb1		ILMN_2473313	005670056	S	20	GGAGGACTATCTAGGAGATGGAAAAGAATCCTTCCCTCAACCCTCCCCAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201033	ILMN_245024	LOC638067	XM_913950.3	XM_913950.3		638067	149257443	XM_913950.3	LOC638067	XP_919043.2	ILMN_1257448	005720088	S	434	CCAAACAATCTGTGGACCGAAAAGCACCACTTGCTACAACTGGACAGGAG					PREDICTED: Mus musculus similar to Btf3 protein (LOC638067), mRNA.					
Mus musculus	RefSeq	ILMN_192258	ILMN_251709	PPP3CA	NM_008913.3	NM_008913.3		19055	145966731	NM_008913.3	Ppp3ca	NP_032939.1	ILMN_1227899	004180307	S	254	TGCATTGAGAATAATAACAGAGGGTGCTTCGATTCTCCGACAGGAAAAAA				3qG3	Mus musculus protein phosphatase 3, catalytic subunit, alpha isoform (Ppp3ca), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin [goid 5955] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IDA]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IDA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CnA; AW413465; Calna; AI841391; MGC106804; CN; Caln; 2900074D19Rik	CnA; AW413465; Calna; AI841391; MGC106804; CN; Caln; 2900074D19Rik
Mus musculus	RefSeq	ILMN_192258	ILMN_251709	PPP3CA	NM_008913.3	NM_008913.3		19055	145966731	NM_008913.3	Ppp3ca	NP_032939.1	ILMN_2611431	006450082	S	1930	GTTAGGGGAATGAACGCGTTTTCCTACTGCACTGGGGACTTTTAGATAGG				3qG3	Mus musculus protein phosphatase 3, catalytic subunit, alpha isoform (Ppp3ca), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin [goid 5955] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IDA]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IDA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CnA; AW413465; Calna; AI841391; MGC106804; CN; Caln; 2900074D19Rik	CnA; AW413465; Calna; AI841391; MGC106804; CN; Caln; 2900074D19Rik
Mus musculus	RefSeq	ILMN_218964	ILMN_218964	ANGPTL1	NM_028333.2	NM_028333.2		72713	66792795	NM_028333.2	Angptl1	NP_082609.2	ILMN_2874422	002630553	S	1637	GGCATTTTCTGGGCTGAATACAGAGGCGGGTCCTACTCCTTGAGGGCAGT	1	+	158790656-158790705	1qH1	Mus musculus angiopoietin-like 1 (Angptl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IPI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]	ANG3; 2810039D03Rik; ANGPT3; ANGY; MGC100363; ARP1	ANG3; 2810039D03Rik; ANGPT3; ANGY; MGC100363; ARP1
Mus musculus	RefSeq	ILMN_217419	ILMN_217419	CACNG5	NM_080644.3	NM_080644.3		140723	142370454	NM_080644.3	Cacng5	NP_542375.1	ILMN_2725698	004260189	S	3241	CAAGCTGGATGCGCGTCTGGGTGCGCTCGACTCCAACTTTTGTCAATGTT	11	-	107736306-107736355	11qE1	Mus musculus calcium channel, voltage-dependent, gamma subunit 5 (Cacng5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217419	ILMN_217419	CACNG5	NM_080644.3	NM_080644.3		140723	142370454	NM_080644.3	Cacng5	NP_542375.1	ILMN_1226821	005260646	S	823	CCGCAGCCCCTCGGACATCTCCAGCGACGCCTCGCTACAGATGAACAGCA	11	-	107738724-107738773	11qE1	Mus musculus calcium channel, voltage-dependent, gamma subunit 5 (Cacng5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187045	ILMN_258232	ZFP276	NM_020497.1	NM_020497.1		57247	10048419	NM_020497.1	Zfp276	NP_065243.1	ILMN_2509962	004120392	S	2914	GTCTCACACAGAATAGAGACTGGGAGTCCAATAGGTCCTTCTCCCACTGC	8	+	125793452-125793501	8qE1	Mus musculus zinc finger protein (C2H2 type) 276 (Zfp276), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	D8Ertd377e; AW048709; D8Ertd370e	D8Ertd377e; AW048709; D8Ertd370e
Mus musculus	RefSeq	ILMN_210689	ILMN_210689	GFPT1	NM_013528.2	NM_013528.2		14583	31980779	NM_013528.2	Gfpt1	NP_038556.1	ILMN_2608226	005810719	S	2224	CAACACGAGATACCTTTTGTATTTAAATTTTTGATTTAAACTATTGCCTC	6	+	87038181-87038230	6qD1	Mus musculus glutamine fructose-6-phosphate transaminase 1 (Gfpt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate [goid 4360] [evidence IEA]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	GFA; GFAT; AI324119; Gfpt; GFAT1; GFAT1m	GFA; GFAT; AI324119; Gfpt; GFAT1; GFAT1m
Mus musculus	RefSeq	ILMN_210514	ILMN_210514	4930564B18RIK	XM_127749.4	XM_127749.4		75272	94397263	XM_127749.4	4930564B18Rik	XP_127749.1	ILMN_2606376	004850064	S	787	GCCCCAGGTCGCTGTGTGTTATATGAGCCTATAGACACCCTGAAACATCG	14	+	76066862-76066911	14qD3	PREDICTED: Mus musculus RIKEN cDNA 4930564B18 gene (4930564B18Rik), mRNA.					
Mus musculus	MEEBO	ILMN_187305	ILMN_187305	SCL0003531.1_19	scl0003531.1_19	AK004738.1			12836136	AK004738.1	scl0003531.1_19		ILMN_2442976	001240326	S	13	CGCCCGGGACCCCGCAGCACCGCTGCCCCGATCCGAGCCCTCCACCCCCA										
Mus musculus	MEEBO	ILMN_222553	ILMN_222553	AI507495	scl0105866.1_33	XM_128271.2			38077189	XM_128271.2	AI507495		ILMN_2751325	007040634	S	1419	GTGGGCTTTGGTGCCTCGAGCAGTTACAACTATAGACCTCTGGCCCTGGA										
Mus musculus	Riken	ILMN_202983	ILMN_202983	USP25	ri|5830452H05|PX00040M07|AK030906|2777					AK030906	Usp25		ILMN_2553820	003170170	S	2338	CTGGTTTTGGTTCAGGTTACGTTTGTGCGCAGTCACTGAGGGATGTGTGG						A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence ISS]		
Mus musculus	Riken	ILMN_205317	ILMN_205317	MURR2	ri|8030454G07|PX00103K20|AK033182|2366					AK033182	Murr2		ILMN_2571657	007160523	S	623	TGGACATTCATTCTTTACCCCAGCAACTATACTTCCAGGGATTTGCCCCC										
Mus musculus	RefSeq	ILMN_211720	ILMN_211720	D13WSU177E	NM_178605.4	NM_178605.4		28126	146198541	NM_178605.4	D13Wsu177e	NP_848720.1	ILMN_1227079	006560121	S	1637	GGCCTAACTAACCTCAACTATGAATGATGTAAAAACCTGCAATTGTGTGT				13qB1	Mus musculus DNA segment, Chr 13, Wayne State University 177, expressed (D13Wsu177e), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AA409471	AA409471
Mus musculus	RefSeq	ILMN_212441	ILMN_212441	GSTM1	NM_010358.4	NM_010358.4		14862	141803498	NM_010358.4	Gstm1	NP_034488.1	ILMN_1228233	003850129	S	1135	CACGCTTCCTAGAATTACCCCGATGGTCAACACTATCTTAGTGCTAGCCC	3	-	107815277-107815326	3qF2.3	Mus musculus glutathione S-transferase, mu 1 (Gstm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]	Gstb1; Gstb-1	Gstb1; Gstb-1
Mus musculus	MEEBO	ILMN_195442	ILMN_195442	SCL0001550.1_29	scl0001550.1_29	BC044301.1			27696476	BC044301.1	scl0001550.1_29		ILMN_1248403	001340170	S	5	CAGGTGTACATTTTGCATCTGTCAGAACTTCCTCAACTCAGACTTGCTGC										
Mus musculus	RefSeq	ILMN_218209	ILMN_218209	ERO1LB	NM_026184.2	NM_026184.2		67475	38348229	NM_026184.2	Ero1lb	NP_080460.2	ILMN_2692960	001980470	S	3536	TGACCCTGATGATGAATCTGTAGGAGGCTATCTGCCGGTTCTGTCACCGG	13	+	12701092-12701141	13qA1	Mus musculus ERO1-like beta (S. cerevisiae) (Ero1lb), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Oxidation of two organic sulfhydryl groups (thiols) by a disulfide compound to form a disulfide bond [goid 6467] [evidence IEA]	Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide [goid 16671] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	MGC77955; 1300013B24Rik; 1700065B09Rik; ero1-beta	MGC77955; 1300013B24Rik; 1700065B09Rik; ero1-beta
Mus musculus	RefSeq	ILMN_216903	ILMN_255242	BAZ1A	XM_915565.3	XM_915565.3		217578	149263135	XM_915565.3	Baz1a	XP_920658.3	ILMN_1227401	000060382	S	4113	CAGGCAGTTGATTCCTTTAAATACTGCTGAAAGTCTCTCTCTCCAGCATA				12qC1	PREDICTED: Mus musculus bromodomain adjacent to zinc finger domain 1A (Baz1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_189758	ILMN_255242	BAZ1A	XM_915565.3	XM_915565.3		217578	149263135	XM_915565.3	Baz1a	XP_920658.3	ILMN_1237910	005670491	S	631	CGTGATAAACTAAAGCTTTTTCTCAAGCAACACTGTGAAGCACAAGATGG				12qC1	PREDICTED: Mus musculus bromodomain adjacent to zinc finger domain 1A (Baz1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210999	ILMN_210999	FLT4	NM_008029.2	NM_008029.2		14257	141801963	NM_008029.2	Flt4	NP_032055.1	ILMN_2662229	002680435	S	4059	AGGTCTCCCAGCCATGTACAGAAGGTGACTGCTGCCCGTCTGCTGGCTCC	11	+	49464509-49464558	11qB1.2	Mus musculus FMS-like tyrosine kinase 4 (Flt4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence ISO]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IGI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Flt-4; AI323512; VEGFR-3; Chy; VEGFR3	Flt-4; AI323512; VEGFR-3; Chy; VEGFR3
Mus musculus	RefSeq	ILMN_210999	ILMN_210999	FLT4	NM_008029.2	NM_008029.2		14257	141801963	NM_008029.2	Flt4	NP_032055.1	ILMN_2611439	000070309	S	5176	CCCCTTGGGGGCCCCTGCCTTCAGCTTACCCTATACTTTTACCTGACTTT	11	+	49465626-49465675	11qB1.2	Mus musculus FMS-like tyrosine kinase 4 (Flt4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence ISO]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IGI]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Flt-4; AI323512; VEGFR-3; Chy; VEGFR3	Flt-4; AI323512; VEGFR-3; Chy; VEGFR3
Mus musculus	RefSeq	ILMN_200253	ILMN_200253	LOC386072	XM_359056.1	XM_359056.1			38081117	XM_359056.1	LOC386072		ILMN_2538111	004610133	S	16	CTCAAGAGACTGGAGACACCAGGGAGTTTAGAGGTCAGTCTCCCAGCCAA										
Mus musculus	RefSeq	ILMN_256245	ILMN_256245	CD3E	NM_007648.1	NM_007648.1		12501	6680885	NM_007648.1	Cd3e	NP_031674.1	ILMN_2784580	006520360	S	1320	CCCTGCCACAGGTGCCTCTCCAGATTTCCCCTTAGATCCTCGGATGGTCA	9	-	44749804-44749853	9qA5.2	Mus musculus CD3 antigen, epsilon polypeptide (Cd3e), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [evidence ISO]; A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein [goid 42105] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IDA]; A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor [goid 46649] [evidence IMP]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IDA]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]	T3e; CD3epsilon; CD3; AI504783	T3e; CD3epsilon; CD3; AI504783
Mus musculus	RefSeq	ILMN_235358	ILMN_235358	GM239	NM_001033333.1	NM_001033333.1		237558	85701829	NM_001033333.1	Gm239	NP_001028505.1	ILMN_2814357	006560154	S	2780	CACATTTGGAGGCTTCCCGTGGCCCGGTTCTCCGACAGCGCATACCATTT	10	-	116181073-116181122	10qD2	Mus musculus gene model 239, (NCBI) (Gm239), mRNA.					
Mus musculus	MEEBO	ILMN_214024	ILMN_214024	KCNJ14	scl0211480.1_306				22122398	NM_145963	Kcnj14		ILMN_2680891	007610131	S	39	GACCTGAACACATTAGCACCCACAGAGGCCCCTCTCCAGCCTGAGCAGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]		
Mus musculus	RefSeq	ILMN_242429	ILMN_242429	ENTPD7	NM_053103.3	NM_053103.3		93685	82617565	NM_053103.3	Entpd7	NP_444333.3	ILMN_2962031	004210164	S	5501	ACCCTGCGTGGGTTCCTGTCCATTCCAGGCTTTCTGTTTTGGTGGGAGGC	19	+	43786751-43786800	19qC3	Mus musculus ectonucleoside triphosphate diphosphohydrolase 7 (Entpd7), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of a ribonucleoside diphosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with diphosphate on its glycose moiety [goid 9191] [evidence ISO]; The chemical reactions and pathways resulting in the breakdown of a ribonucleoside triphosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with triphosphate on its glycose moiety [goid 9203] [evidence ISO]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence ISO]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence ISO]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	1810020C02Rik; 2810003F23Rik; Lysal2; 1810012B13Rik; LALP1	1810020C02Rik; 2810003F23Rik; Lysal2; 1810012B13Rik; LALP1
Mus musculus	Riken	ILMN_203064	ILMN_203064	C030003A18RIK	ri|C030003A18|PX00073H05|AK047623|2026					AK047623	C030003A18Rik		ILMN_2554464	003390398	S	1207	TGCTCTTCGCCAGGAAACTGCAAGGGCAACAGGCTGCTCTGTGGATAGTC										
Mus musculus	RefSeq	ILMN_218513	ILMN_218513	UTP15	NM_178918.3	NM_178918.3		105372	118130641	NM_178918.3	Utp15	NP_849249.1	ILMN_1232566	001230477	S	3981	GTCTGTGCTCTTAAGTTGCTGAAGCAACTGATGTTAAATGGGACCATTAG	13	-	99016840-99016889	13qD1	Mus musculus UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast) (Utp15), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		AW544865	AW544865
Mus musculus	RefSeq	ILMN_216925	ILMN_216925	DHX38	NM_178380.1	NM_178380.1		64340	30410009	NM_178380.1	Dhx38	NP_848467.1	ILMN_3161767	007150609	S	4032	GCTTGAGCAGCAGGAGGTGGCTGGACCATCGTACCCACGTAACCTGCCCA	8	-	112072032-112072081	8qD3	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 38 (Dhx38), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]	Prp16; Ddx38; AW540902; AI325984; 5730550P09Rik; mKIAA0224	Prp16; Ddx38; AW540902; AI325984; 5730550P09Rik; mKIAA0224
Mus musculus	RefSeq	ILMN_251331	ILMN_251331	CDC14B	NM_172587.2	NM_172587.2		218294	31982553	NM_172587.2	Cdc14b	NP_766175.2	ILMN_2874816	000010255	S	2646	CCAGGTGGAGTTCCAGGCCAGCCAATGATACACAAGGAAATCCTGTCTCA	13	-	64296958-64297007	13qB3	Mus musculus CDC14 cell division cycle 14 homolog B (S. cerevisiae) (Cdc14b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	CDC14B3; A530086E13Rik; Cdc14B1; AA472821; 2810432N10Rik	CDC14B3; A530086E13Rik; Cdc14B1; AA472821; 2810432N10Rik
Mus musculus	RefSeq	ILMN_195200	ILMN_251331	CDC14B	NM_172587.2	NM_172587.2		218294	31982553	NM_172587.2	Cdc14b	NP_766175.2	ILMN_1244296	004230309	S	1539	GCTGACCTCTGCACTGTGTAGTGTTGCCATCTGGTGGATTGTGTGTGACT	13	-	64306660-64306709	13qB3	Mus musculus CDC14 cell division cycle 14 homolog B (S. cerevisiae) (Cdc14b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	CDC14B3; A530086E13Rik; Cdc14B1; AA472821; 2810432N10Rik	CDC14B3; A530086E13Rik; Cdc14B1; AA472821; 2810432N10Rik
Mus musculus	RefSeq	ILMN_195200	ILMN_251331	CDC14B	NM_172587.2	NM_172587.2		218294	31982553	NM_172587.2	Cdc14b	NP_766175.2	ILMN_2729708	004590730	S	2861	CTCACTGTTGCCTTTGGTTAGGGAATATGACTAGAAACTGTAGTGTGCCT	13	-	64296743-64296792	13qB3	Mus musculus CDC14 cell division cycle 14 homolog B (S. cerevisiae) (Cdc14b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	CDC14B3; A530086E13Rik; Cdc14B1; AA472821; 2810432N10Rik	CDC14B3; A530086E13Rik; Cdc14B1; AA472821; 2810432N10Rik
Mus musculus	Riken	ILMN_206501	ILMN_206501	D630016B11RIK	ri|D630016B11|PX00196M17|AK085362|3178					AK085362	D630016B11Rik		ILMN_1255142	005700131	S	2758	CCCGTGTGTAATCTTTGTCATCGGTCCAGGGTTTCAGCCACGGCATGTGC										
Mus musculus	RefSeq	ILMN_212187	ILMN_212187	DOK1	NM_010070.3	NM_010070.3		13448	31981795	NM_010070.3	Dok1	NP_034200.3	ILMN_2704141	006980446	S	499	TCTGGGTAACCTCGCAGAAGACCGAGGCTTCTGAACGCTGCGGCTTGCAA	6	-	82984273-82984322	6qC3	Mus musculus docking protein 1 (Dok1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IPI]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IPI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 5066] [evidence IPI]	AW557123; p62DOK	AW557123; p62DOK
Mus musculus	RefSeq	ILMN_212187	ILMN_212187	DOK1	NM_010070.3	NM_010070.3		13448	31981795	NM_010070.3	Dok1	NP_034200.3	ILMN_1242767	002230201	S	421	CGGAGAACCAACCTAAGTTTTCTGCCTTGGAGATGCTGGAGAATTCGCTG	6	-	82984470-82984519	6qC3	Mus musculus docking protein 1 (Dok1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IPI]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IPI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 5066] [evidence IPI]	AW557123; p62DOK	AW557123; p62DOK
Mus musculus	RefSeq	ILMN_212187	ILMN_212187	DOK1	NM_010070.3	NM_010070.3		13448	31981795	NM_010070.3	Dok1	NP_034200.3	ILMN_1257069	002120427	S	1736	GTTCTTTGCCAGATACATATTTAACTTATAAGACAAATCTCATTAAAGCC	6	-	82982961-82983010	6qC3	Mus musculus docking protein 1 (Dok1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IPI]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IPI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 5066] [evidence IPI]	AW557123; p62DOK	AW557123; p62DOK
Mus musculus	MEEBO	ILMN_195787	ILMN_195787	IGHV1S34_X02467_IG_HEAVY_VARIABLE_1S34_71	IGHV1S34_X02467_Ig_heavy_variable_1S34_71						IGHV1S34_X02467_Ig_heavy_variable_1S34_71		ILMN_1235332	003870139	S	1	GCACTGGGTCAAGCAGAGCCATGGAAAGAGCCTTGAGTGGATTGGATATA										
Mus musculus	RefSeq	ILMN_188403	ILMN_188403	UROS	NM_009479.2	NM_009479.2		22276	83921610	NM_009479.2	Uros	NP_033505.1	ILMN_2498173	000580484	S	448	AGAAGCCACACTGATTCCTGTGCTGTCATTTGAGTTTATGTCTCTCCCCA	7	-	140893535-140893584	7qF3	Mus musculus uroporphyrinogen III synthase (Uros), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IDA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IMP]; The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next [goid 33014] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: hydroxymethylbilane = uroporphyrinogen-III + H2O [goid 4852] [evidence IDA]; Catalysis of the reaction: hydroxymethylbilane = uroporphyrinogen-III + H2O [goid 4852] [evidence IMP]	Uros3; AI415298	Uros3; AI415298
Mus musculus	RefSeq	ILMN_188403	ILMN_188403	UROS	NM_009479.2	NM_009479.2		22276	83921610	NM_009479.2	Uros	NP_033505.1	ILMN_2452383	001110300	S	1359	GGGTCTAGAAAGAAGGAACTGAAATCGACCATGTGGTGACTTGTGCCCAC	7	-	140878415-140878464	7qF3	Mus musculus uroporphyrinogen III synthase (Uros), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IDA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IMP]; The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next [goid 33014] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: hydroxymethylbilane = uroporphyrinogen-III + H2O [goid 4852] [evidence IDA]; Catalysis of the reaction: hydroxymethylbilane = uroporphyrinogen-III + H2O [goid 4852] [evidence IMP]	Uros3; AI415298	Uros3; AI415298
Mus musculus	RefSeq	ILMN_201960	ILMN_188403	UROS	NM_009479.2	NM_009479.2		22276	83921610	NM_009479.2	Uros	NP_033505.1	ILMN_2545953	004540315	S	257	GGGTCAGTGGCCTCGGATCCTCGGGTCTGAGGAACAGTCTGAGATCTAAG	7	-	140894133-140894152:140900692-140900721	7qF3	Mus musculus uroporphyrinogen III synthase (Uros), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IDA]; The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IMP]; The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next [goid 33014] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: hydroxymethylbilane = uroporphyrinogen-III + H2O [goid 4852] [evidence IDA]; Catalysis of the reaction: hydroxymethylbilane = uroporphyrinogen-III + H2O [goid 4852] [evidence IMP]	Uros3; AI415298	Uros3; AI415298
Mus musculus	RefSeq	ILMN_201511	ILMN_201511	SERPINA1B	NM_009244.4	NM_009244.4		20701	93102380	NM_009244.4	Serpina1b	NP_033270.3	ILMN_1215859	001430253	S	1032	CTGGAGACTATAACTTGAAGACACTCATGAGTCCACTGGGCATCACCCGG	12|NT_114988.1	+	74317-74366	12qE	Mus musculus serine (or cysteine) preptidase inhibitor, clade A, member 1b (Serpina1b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IMP]; Stops, prevents or reduces the activity of the serine endopeptidase chymotrypsin [goid 30569] [evidence IMP]	Spi1-2; Dom2; D12Ucla2; PI2	Spi1-2; Dom2; D12Ucla2; PI2
Mus musculus	RefSeq	ILMN_201511	ILMN_201511	SERPINA1B	NM_009244.4	NM_009244.4		20701	93102380	NM_009244.4	Serpina1b	NP_033270.3	ILMN_2659680	002120152	S	1209	TCTTTGAAGCCGTTCCTATGTCTATGCCCCCTATCCTGCGCTTCGACCAC	12|NT_114988.1	+	75290-75339	12qE	Mus musculus serine (or cysteine) preptidase inhibitor, clade A, member 1b (Serpina1b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IMP]; Stops, prevents or reduces the activity of the serine endopeptidase chymotrypsin [goid 30569] [evidence IMP]	Spi1-2; Dom2; D12Ucla2; PI2	Spi1-2; Dom2; D12Ucla2; PI2
Mus musculus	RefSeq	ILMN_221756	ILMN_253660	GVIN1	NM_001039160.2	NM_001039160.2		74558	115270967	NM_001039160.2	Gvin1	NP_001034249.2	ILMN_2739905	000520687	S	8617	ATGATTTTACTTCTCTCTGATTTATTATCTAATGCTTTATTCATATATAC	7	-	113300228-113300277	7qE3	Mus musculus GTPase, very large interferon inducible 1 (Gvin1), transcript variant B, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Iigs1; VLIG; 9830104F22Rik; 9130002C22Rik; VLIG-1	Iigs1; VLIG; 9830104F22Rik; 9130002C22Rik; VLIG-1
Mus musculus	RefSeq	ILMN_221756	ILMN_253660	GVIN1	NM_001039160.2	NM_001039160.2		74558	115270967	NM_001039160.2	Gvin1	NP_001034249.2	ILMN_1248351	006250326	S	7302	CCTAGAAGAGAATTATGGCAAAAAATTTACAGGGAAAGGTAGTCTTCCAG	7	-	113301543-113301592	7qE3	Mus musculus GTPase, very large interferon inducible 1 (Gvin1), transcript variant B, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Iigs1; VLIG; 9830104F22Rik; 9130002C22Rik; VLIG-1	Iigs1; VLIG; 9830104F22Rik; 9130002C22Rik; VLIG-1
Mus musculus	RefSeq	ILMN_253660	ILMN_253660	GVIN1	NM_001039160.2	NM_001039160.2		74558	115270967	NM_001039160.2	Gvin1	NP_001034249.2	ILMN_3120510	000450735	A	8485	TCACACATGCCCTCTTTGGATCATTGACATAGCTAGTCTTCAACATCCTC	7	-	113300360-113300409	7qE3	Mus musculus GTPase, very large interferon inducible 1 (Gvin1), transcript variant B, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Iigs1; VLIG; 9830104F22Rik; 9130002C22Rik; VLIG-1	Iigs1; VLIG; 9830104F22Rik; 9130002C22Rik; VLIG-1
Mus musculus	RefSeq	ILMN_223521	ILMN_223521	NUB1	NM_016736.2	NM_016736.2		53312	119360353	NM_016736.2	Nub1	NP_058016.2	ILMN_2765080	001470475	S	2982	CAGCCAGATGTGGTGTGGGCCAAGTGCCACTGTGTTCCCAAGAGCTTTTC	5	+	24215900-24215949	5qA3	Mus musculus negative regulator of ubiquitin-like proteins 1 (Nub1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			NY-REN-18; 4931404D21Rik; 6330412F12Rik; BS4	NY-REN-18; 4931404D21Rik; 6330412F12Rik; BS4
Mus musculus	RefSeq	ILMN_198633	ILMN_198633	LOC333559	XM_285511.1	XM_285511.1			28529061	XM_285511.1	LOC333559		ILMN_1235190	006550437	S	20	TCTCAGTTCTCTGGGCCTGTAATGGAGAAAAGGATATCCAGACAGCACTG										
Mus musculus	RefSeq	ILMN_218982	ILMN_218982	ISOC1	NM_025478.3	NM_025478.3		66307	118130314	NM_025478.3	Isoc1	NP_079754.2	ILMN_1235434	003610328	S	2041	GTTTGTTTAAAATCATTGGAACCTTCAAAGGAGGGGAATCCTCTGCAGGC	18	+	58838702-58838751	18qD3	Mus musculus isochorismatase domain containing 1 (Isoc1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2610034N03Rik	2610034N03Rik
Mus musculus	RefSeq	ILMN_218668	ILMN_218668	RAB18	NM_181070.4	NM_181070.4		19330	146198571	NM_181070.4	Rab18	NP_851415.1	ILMN_1217153	003610470	S	1293	GTGATGAACTCAGCTACGCAGGGCACTAACCCTATGTTGCACACGCTGGG				18qA1	Mus musculus RAB18, member RAS oncogene family (Rab18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AA959686	AA959686
Mus musculus	RefSeq	ILMN_193830	ILMN_218668	RAB18	NM_181070.4	NM_181070.4		19330	146198571	NM_181070.4	Rab18	NP_851415.1	ILMN_2689728	001050750	S	364	TGGTTAAATGAATTGGAAACATACTGTACAAGAAATGACATAGTAAACAT				18qA1	Mus musculus RAB18, member RAS oncogene family (Rab18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AA959686	AA959686
Mus musculus	MEEBO	ILMN_185783	ILMN_185783	CBX3	scl30050.2_218				6680859	NM_007624	Cbx3		ILMN_2629052	004900039	S	467	CTTCTACGAGGAGCGGCTGACTTGGCATTCTTGTCCTGAAGATGAAGCAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; A region of heterochromatin located near the centromere of a chromosome in the nucleus [goid 31618] [evidence IDA]; A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure [goid 10369] [evidence IDA]; The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 779] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194998	ILMN_236005	BCL7C	NM_009746.2	NM_009746.2		12055	34328165	NM_009746.2	Bcl7c	NP_033876.1	ILMN_1216273	003170176	S	761	AGCTGAGGCCCCCGAAGCTTACCCTGTCTTTGAGCCAGTGCCATCTGTCC	7	-	134848646-134848689:134849241-134849246	7qF3	Mus musculus B-cell CLL/lymphoma 7C (Bcl7c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C230096E12Rik	C230096E12Rik
Mus musculus	RefSeq	ILMN_215450	ILMN_240941	1100001E04RIK	NM_001081123.1	NM_001081123.1		75404	124487452	NM_001081123.1	1100001E04Rik	NP_001074592.1	ILMN_2659694	006200685	S	2917	GAGGGATAGAAACTGTTCATACAATGGGTAACAACCACAGAGCTCGAAGA	X	+	46853305-46853354	XqA5	Mus musculus RIKEN cDNA 1100001E04 gene (1100001E04Rik), mRNA.				RP23-225G17.1	RP23-225G17.1
Mus musculus	RefSeq	ILMN_217300	ILMN_217300	CTSA	NM_008906.3	NM_008906.3		19025	84042524	NM_008906.3	Ctsa	NP_032932.2	ILMN_3120827	004260564	A	3244	GGCAGCAAGTGACAGCCTTCCCAGTTCTATCCAATCATCCTTCAGGTAGC	2	+	164666102-164666151	2qH3	Mus musculus cathepsin A (Ctsa), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PPCA; Ppgb; AU019505	PPCA; Ppgb; AU019505
Mus musculus	RefSeq	ILMN_217300	ILMN_217300	CTSA	NM_008906.3	NM_008906.3		19025	84042524	NM_008906.3	Ctsa	NP_032932.2	ILMN_3045359	006180040	I	376	GCTCACGTGACCAGAGCTACACATGACTTCCAGTCCAAAGGCGCCTCCTG	2	+	164659275-164659296:164659297-164659324	2qH3	Mus musculus cathepsin A (Ctsa), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PPCA; Ppgb; AU019505	PPCA; Ppgb; AU019505
Mus musculus	RefSeq	ILMN_192546	ILMN_192546	UPB1	NM_133995.1	NM_133995.1		103149	19527211	NM_133995.1	Upb1	NP_598756.1	ILMN_2516705	004040376	S	18	CCCCTAGCTCGGGTTAGGTTTGGGGACATATCCGGCCCCAGTGGATAAGT	10	+	74850760-74850771:74850772-74850809	10qC1	Mus musculus ureidopropionase, beta (Upb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the reaction: N-carbamoyl-beta-alanine + H2O = beta-alanine + CO2 + NH3 [goid 3837] [evidence IEA]	AI195023	AI195023
Mus musculus	RefSeq	ILMN_192546	ILMN_192546	UPB1	NM_133995.1	NM_133995.1		103149	19527211	NM_133995.1	Upb1	NP_598756.1	ILMN_2870788	004760092	S	1036	GGGCTGCTGGTCACGGAGCTCAACCTCAATCTCTGCCAGCAGATCAATGA	10	+	74881863-74881912	10qC1	Mus musculus ureidopropionase, beta (Upb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the reaction: N-carbamoyl-beta-alanine + H2O = beta-alanine + CO2 + NH3 [goid 3837] [evidence IEA]	AI195023	AI195023
Mus musculus	RefSeq	ILMN_192546	ILMN_192546	UPB1	NM_133995.1	NM_133995.1		103149	19527211	NM_133995.1	Upb1	NP_598756.1	ILMN_2870786	001470626	S	1098	CAAGATGACGGGACGACTTGAGATGTATGCCCGGGAACTTGCCGAAGCGG	10	+	74881925-74881927:74883570-74883616	10qC1	Mus musculus ureidopropionase, beta (Upb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the reaction: N-carbamoyl-beta-alanine + H2O = beta-alanine + CO2 + NH3 [goid 3837] [evidence IEA]	AI195023	AI195023
Mus musculus	RefSeq	ILMN_209472	ILMN_209472	9930104L06RIK	NM_177573.3	NM_177573.3		194268	114145556	NM_177573.3	9930104L06Rik	NP_808241.2	ILMN_3001135	002970465	S	2456	ACAGCCACTGCTCGGGGGTCTCAGCTTCCCATGTGCTCTACGAGTCAGGG	4	+	124621419-124621468	4qD2.2	Mus musculus RIKEN cDNA 9930104L06 gene (9930104L06Rik), mRNA.				MGC107426	MGC107426
Mus musculus	RefSeq	ILMN_193508	ILMN_254390	HS3ST3A1	NM_178870.4	NM_178870.4		15478	146198775	NM_178870.4	Hs3st3a1	NP_849201.1	ILMN_2627193	001570021	S	3844	CCCAGAATTGTATCTAACAGCTGCACTCAGCAACCTCCCTCTTTTCCCAT				11qB3	Mus musculus heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 (Hs3st3a1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate, with a substrate consensus sequence of Glc(N2S>NAc)+/-6S GlcA GlcN2S*+/-6S GlcA>IdoA+/-2S Glc(N2S/NAc)+/-6S [goid 8467] [evidence IEA]	Hs3st3a; 3Ost3a	Hs3st3a; 3Ost3a
Mus musculus	RefSeq	ILMN_200825	ILMN_200825	LOC385375	XM_358213.1	XM_358213.1			38086389	XM_358213.1	LOC385375		ILMN_1249556	006020279	S	563	GCGCTGACCATAGAGCATTCCCCAAGCAAAATCCTGTAACGGGGCTTCCC										
Mus musculus	RefSeq	ILMN_215914	ILMN_259589	HECW1	NM_001081348.2	NM_001081348.2		94253	154240741	NM_001081348.2	Hecw1	NP_001074817.2	ILMN_2665117	000240349	S	7274	CTCTACCCTTATGCAAGGTTCTACACAAATCCCAAGAGCAATAGCATTTC				13qA1	Mus musculus HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 (Hecw1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AV273951; E130207I19Rik; Nedl1; 9330116H24Rik	AV273951; E130207I19Rik; Nedl1; 9330116H24Rik
Mus musculus	RefSeq	ILMN_203544	ILMN_259589	HECW1	NM_001081348.2	NM_001081348.2		94253	154240741	NM_001081348.2	Hecw1	NP_001074817.2	ILMN_1256137	002850719	S	6218	CATCTGATGTTCACAGACACCACATACAAAGCTGCAGAGCACGATGGTGC				13qA1	Mus musculus HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 (Hecw1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AV273951; E130207I19Rik; Nedl1; 9330116H24Rik	AV273951; E130207I19Rik; Nedl1; 9330116H24Rik
Mus musculus	RefSeq	ILMN_212717	ILMN_212717	EG328354	NM_177813.3	NM_177813.3		328354	142365320	NM_177813.3	EG328354	NP_808481.1	ILMN_2629500	001440324	S	1300	GGGTCATAGGCATGATTATAGCAGAAATTGCTTCTGTGTCCTTAGTACAA	14	-	13990473-13990522	14qA1	Mus musculus predicted gene, EG328354 (EG328354), mRNA.				C630025C03	C630025C03
Mus musculus	RefSeq	ILMN_200400	ILMN_200400	LOC384248	XM_357523.1	XM_357523.1			38081616	XM_357523.1	LOC384248		ILMN_1246707	004760707	S	456	TGAGACTGCCACCGGAGGTCAGCTGCCCCTGGGCATCTGGTGTTTTCTTT										
Mus musculus	RefSeq	ILMN_187848	ILMN_233238	RPRD2	NM_001081293.1	NM_001081293.1		75137	124486840	NM_001081293.1	Rprd2	NP_001074762.1	ILMN_1244778	006040687	S	6265	CCAGCAAGTTCACACAGGACTCTACAGAGGAAAGAAAAGGAGGGCTTTGG	3	-	95565900-95565949	3qF2.1	Mus musculus Regulation of nuclear pre-mRNA domain containing 2 (Rprd2), mRNA.				6720469I21Rik; 2810036A19Rik; AL022841; mKIAA0460; AU021304; BB077382; AL022940	6720469I21Rik; 2810036A19Rik; AL022841; mKIAA0460; AU021304; BB077382; AL022940
Mus musculus	RefSeq	ILMN_233238	ILMN_233238	RPRD2	NM_001081293.1	NM_001081293.1		75137	124486840	NM_001081293.1	Rprd2	NP_001074762.1	ILMN_3081402	003190255	A	294	TCCAGTCGGTGACCAACACCATGGAATCCATTCAAGGCTTGTCGTCCTGG	3	-	95622533-95622582	3qF2.1	Mus musculus Regulation of nuclear pre-mRNA domain containing 2 (Rprd2), mRNA.				6720469I21Rik; 2810036A19Rik; AL022841; mKIAA0460; AU021304; BB077382; AL022940	6720469I21Rik; 2810036A19Rik; AL022841; mKIAA0460; AU021304; BB077382; AL022940
Mus musculus	RefSeq	ILMN_188048	ILMN_233238	RPRD2	NM_001081293.1	NM_001081293.1		75137	124486840	NM_001081293.1	Rprd2	NP_001074762.1	ILMN_1217909	007000092	S	708	CTCAGAAGCAGCTGAAAGAAAATCTGAACAAACAACCGAATAAGCAGTGG	3	-	95590255-95590304	3qF2.1	Mus musculus Regulation of nuclear pre-mRNA domain containing 2 (Rprd2), mRNA.				6720469I21Rik; 2810036A19Rik; AL022841; mKIAA0460; AU021304; BB077382; AL022940	6720469I21Rik; 2810036A19Rik; AL022841; mKIAA0460; AU021304; BB077382; AL022940
Mus musculus	RefSeq	ILMN_212742	ILMN_212742	SHC1	NM_011368.3	NM_011368.3		20416	31543699	NM_011368.3	Shc1	NP_035498.2	ILMN_2957070	004590008	S	2978	CCTTGCAAGCTCACTCTGTGTGTAGGCTTTCTGGACAAGGAATGGTCGCC	3	+	89515830-89515879	3qF1	Mus musculus src homology 2 domain-containing transforming protein C1 (Shc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p66; ShcA; Shc	p66; ShcA; Shc
Mus musculus	RefSeq	ILMN_197257	ILMN_321720	A330043C09RIK	XM_001476872.1	XM_001476872.1		329430	149249449	XM_001476872.1	A330043C09Rik	XP_001476922.1	ILMN_1228223	004220315	S	627	GCTTGTTAGTGGTTGAGGGCCCAGCAGGAAATGTTTTGACACCCAGTGCC				2qC3	PREDICTED: Mus musculus RIKEN cDNA A330043C09 gene (A330043C09Rik), mRNA.					
Mus musculus	MEEBO	ILMN_188272	ILMN_188272	ZFYVE28	scl26706.19_235	XM_132032.3			38079656	XM_132032.3	Zfyve28		ILMN_1251313	006250239	S	5	GAAGGGGGGAATGTAGGAAGCAGACATAGTGGTCTCCAGGGGAAGTAAGC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_198318	ILMN_321680	LOC626309	XR_033415.1	XR_033415.1		626309	149270056	XR_033415.1	LOC626309		ILMN_2531259	004900138	S	444	GAGACACCTCAGCCTCCTAGGAAGAAGAGAGCCCGGGTAGATCCTACTGT				18qB3	PREDICTED: Mus musculus similar to mortality factor 4 like 1 (LOC626309), misc RNA.					
Mus musculus	RefSeq	ILMN_249546	ILMN_249546	FGD6	NM_053072.2	NM_053072.2		13998	37693996	NM_053072.2	Fgd6	NP_444302.3	ILMN_2894961	000940487	S	4556	CTGCTCAAAAGCCGTGCAAGAATGAACACTGCCGAGACAAATCCGCCCAC	10	+	93604596-93604645	10qC2	Mus musculus FYVE, RhoGEF and PH domain containing 6 (Fgd6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	Etohd4; ZFYVE24; AA123052	Etohd4; ZFYVE24; AA123052
Mus musculus	RefSeq	ILMN_203805	ILMN_235302	TBC1D4	NM_001081278.1	NM_001081278.1		210789	124486870	NM_001081278.1	Tbc1d4	NP_001074747.1	ILMN_1238648	006350193	S	2830	GCCCGGCGCATGTACAAGGAGAGTAATTCTTCCTGCAGCCTTCCAAGCCT	14	-	101874395-101874444	14qE2.3	Mus musculus TBC1 domain family, member 4 (Tbc1d4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	5930406J04Rik; As160; A930035N22; KIAA0603; AV295684	5930406J04Rik; As160; A930035N22; KIAA0603; AV295684
Mus musculus	RefSeq	ILMN_191193	ILMN_235302	TBC1D4	NM_001081278.1	NM_001081278.1		210789	124486870	NM_001081278.1	Tbc1d4	NP_001074747.1	ILMN_1253352	000670576	S	4618	GCGCTGGCCAACTGTGAATTGCTGTTGAAAGACTTAACTCATCCAACGAA	14	-	101843785-101843834	14qE2.3	Mus musculus TBC1 domain family, member 4 (Tbc1d4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	5930406J04Rik; As160; A930035N22; KIAA0603; AV295684	5930406J04Rik; As160; A930035N22; KIAA0603; AV295684
Mus musculus	RefSeq	ILMN_216952	ILMN_216952	DHX37	NM_203319.1	NM_203319.1		208144	42600570	NM_203319.1	Dhx37	NP_976064.1	ILMN_2677379	003170156	S	3846	AGATGGAGACTGGTTTCCGGGGTCCTGCTTTGGCATCAGTAGACAGCAAG	5	-	125895019-125895068	5qG1.1	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 37 (Dhx37), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	KIAA1517; MGC90028; Gm451; Gm1050; mKIAA1517	KIAA1517; MGC90028; Gm451; Gm1050; mKIAA1517
Mus musculus	MEEBO	ILMN_211239	ILMN_211239	HSPB2	scl35873.2.103_19	NM_024441.1			13324713	NM_024441.1	Hspb2		ILMN_2613904	000110327	S	429	TTGGAGGCGCCGCGGGGTGGCCGGCATTTGGACACGGAAGTCAATGAAGT						That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process whose specific outcome is the progression of the somatic muscle over time, from its formation to the mature structure. This muscle is found in Nematodes [goid 7525] [evidence IGI]			
Mus musculus	MEEBO	ILMN_214421	ILMN_214421	BSG	scl0003801.1_166	NM_009768.1			34915987	NM_009768.1	Bsg		ILMN_1253274	003710221	S	251	TGTTCACATCCATGCCGCCTACCGTCAGCATGCAGCCAGTTCGCTCTCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_196211	ILMN_196211	MKIAA0282	scl0002358.1_1625				37359881	AK129109	mKIAA0282		ILMN_1221546	003360368	S	6	TGAATGGGTGCTATCCTGTCTCTGTCTGTCTCGGGTTCCTGTGTCTACAG										
Mus musculus	MEEBO	ILMN_223871	ILMN_223871	RPS5	scl33074.8.142_21				6677806	NM_009095	Rps5		ILMN_1236158	002600255	S	535	GGGCTCGTGAGGCTGCTTTCCGGAACATCAAGACCATCGCCGAGTGCCTT						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	RefSeq	ILMN_225376	ILMN_225376	PRDM6	NM_001033281.1	NM_001033281.1		225518	85701783	NM_001033281.1	Prdm6	NP_001028453.1	ILMN_2923625	001260201	S	51	TCGGCCTTCCTCAAAGTGGACCCAGCTTACCTGCAGCACTGGCAGCAACT	18	+	53589965-53590014	18qD1	Mus musculus PR domain containing 6 (Prdm6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle cell differentiation [goid 51151] [evidence IMP]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	PRISM; Gm92	PRISM; Gm92
Mus musculus	RefSeq	ILMN_221504	ILMN_221504	HEXB	NM_010422.1	NM_010422.1		15212	6754185	NM_010422.1	Hexb	NP_034552.1	ILMN_2736489	004670056	S	1047	CCAAGGTTTCATGAAGAGAAAGGGCTTTGGCAGCGATTTTAGAAGACTAG	13	-	97951055-97951104	13qD1	Mus musculus hexosaminidase B (Hexb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances [goid 31323] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The union of male and female gametes to form a zygote [goid 7338] [evidence IMP]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IMP]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IMP]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IGI]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IMP]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IGI]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IMP]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9313] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The actions or reactions of a male, for the purpose of attracting a sexual partner [goid 8049] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of ganglioside, a ceramide oligosaccharide carrying, in addition to other sugar residues, one or more sialic residues [goid 6689] [evidence IMP]; The chemical reactions and pathways involving glycosphingolipids, any compound with residues of sphingoid and at least one monosaccharide [goid 6687] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IGI]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IDA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IMP]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IGI]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221504	ILMN_221504	HEXB	NM_010422.1	NM_010422.1		15212	6754185	NM_010422.1	Hexb	NP_034552.1	ILMN_2829330	001940669	S	1618	TAGAAGTGACAGACGTCTACAGCATTCCAGCTATGATCATGTTGATTCTG	13	-	97946436-97946483:97946484-97946485	13qD1	Mus musculus hexosaminidase B (Hexb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances [goid 31323] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The union of male and female gametes to form a zygote [goid 7338] [evidence IMP]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IMP]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IMP]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IGI]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IMP]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IGI]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IMP]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9313] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; The actions or reactions of a male, for the purpose of attracting a sexual partner [goid 8049] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of ganglioside, a ceramide oligosaccharide carrying, in addition to other sugar residues, one or more sialic residues [goid 6689] [evidence IMP]; The chemical reactions and pathways involving glycosphingolipids, any compound with residues of sphingoid and at least one monosaccharide [goid 6687] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IGI]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IGI]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IDA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IMP]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IGI]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220718	ILMN_220718	ELP3	NM_028811.2	NM_028811.2		74195	141803224	NM_028811.2	Elp3	NP_083087.1	ILMN_1246873	002940221	S	2177	GAAGAGCTGAGGTAGTGGGTTGTGTTAATATGCTTGATGCCGGCCGTCTC	14	-	66149788-66149837	14qD1	Mus musculus elongation protein 3 homolog (S. cerevisiae) (Elp3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]	2610507P14Rik	2610507P14Rik
Mus musculus	MEEBO	ILMN_190556	ILMN_190556	9630021D06RIK	scl29960.1.218_33						9630021D06Rik		ILMN_2471183	003170647	S	12	CACTGTAATACAGTCAGGGTAGCATGTATAAGCTTCTTTAGATACTGGCA										
Mus musculus	RefSeq	ILMN_210892	ILMN_210892	TAS2R126	NM_207028.1	NM_207028.1		387353	46309600	NM_207028.1	Tas2r126	NP_996911.1	ILMN_2798839	006660228	S	871	TTCCGCGGCACCTTCAGGCAGCTACTCCTGTTGGCCAGGGGATTCTGGGT	6	+	42385404-42385453	6qB2.1	Mus musculus taste receptor, type 2, member 126 (Tas2r126), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence TAS]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	mGR26; T2R12; mt2r35; T2R26; Tas2r26	mGR26; T2R12; mt2r35; T2R26; Tas2r26
Mus musculus	RefSeq	ILMN_215108	ILMN_215108	KANK4	NM_172872.2	NM_172872.2		242553	40254256	NM_172872.2	Kank4	NP_766460.2	ILMN_2655586	003290519	S	4485	CCTCGTGTGGATGCTGCTTAGAGATAGGAAGGATGGCAAAACAGACGAGC	4	-	98421849-98421898	4qC6	Mus musculus KN motif and ankyrin repeat domains 4 (Kank4), mRNA.				BC060737; C130031J23; AU021071	BC060737; C130031J23; AU021071
Mus musculus	RefSeq	ILMN_215108	ILMN_215108	KANK4	NM_172872.2	NM_172872.2		242553	40254256	NM_172872.2	Kank4	NP_766460.2	ILMN_1222183	005290068	S	3523	CTGTGTAGCAAGCAGGTAGGTCAGGGCACCCTTGCACAATAGAAAAAGCA	4	-	98422811-98422860	4qC6	Mus musculus KN motif and ankyrin repeat domains 4 (Kank4), mRNA.				BC060737; C130031J23; AU021071	BC060737; C130031J23; AU021071
Mus musculus	RefSeq	ILMN_215108	ILMN_215108	KANK4	NM_172872.2	NM_172872.2		242553	40254256	NM_172872.2	Kank4	NP_766460.2	ILMN_2947948	001170167	S	4409	ACCCAGAAAGGCTGACTTCAGACATTCTGTAGCAAAGTCCTTTTCACAGC	4	-	98421925-98421974	4qC6	Mus musculus KN motif and ankyrin repeat domains 4 (Kank4), mRNA.				BC060737; C130031J23; AU021071	BC060737; C130031J23; AU021071
Mus musculus	RefSeq	ILMN_223298	ILMN_223298	OLFR788	NM_146551.1	NM_146551.1		258544	33239343	NM_146551.1	Olfr788	NP_666762.1	ILMN_2762172	002900328	S	767	ATGCTAATCCCTCTGCAAAAGAAAAGGCCTCATTGACCAAAGGCGTGGCA	10	+	128910516-128910565	10qD3	Mus musculus olfactory receptor 788 (Olfr788), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR111-4	MOR111-4
Mus musculus	RefSeq	ILMN_200616	ILMN_200616	LOC384403	XM_357624.1	XM_357624.1			38084300	XM_357624.1	LOC384403		ILMN_1228587	001940563	S	329	CTGGTGTCCCATCAAGGTTCAGTGGCAATTCTAGGGCAGAAACAACTGTG										
Mus musculus	RefSeq	ILMN_252169	ILMN_252169	ELOVL1	NM_019422.2	NM_019422.2		54325	85702349	NM_019422.2	Elovl1	NP_062295.1	ILMN_3143506	001850128	A	1318	AGAGGTCAGCAATAATCTGTCACTGTGGACTCAGGCTCCCTTCTCACTCC	4	+	118105065-118105114	4qD2.1	Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 (Elovl1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]		AA407424; BB151133; Ssc1	AA407424; BB151133; Ssc1
Mus musculus	RefSeq	ILMN_237841	ILMN_237841	OLFR973	NM_146613.1	NM_146613.1		258606	33239227	NM_146613.1	Olfr973	NP_666824.1	ILMN_3034914	005130022	I	86	TCCTCTTCCTTGGAATCTACCTTCTCACAGTACTGGGGAACCTGGGCATG	9	+	39717475-39717524	9qA5.1	Mus musculus olfactory receptor 973 (Olfr973), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Olfr973-ps1; MOR171-14	Olfr973-ps1; MOR171-14
Mus musculus	RefSeq	ILMN_237841	ILMN_237841	OLFR973	NM_146613.1	NM_146613.1		258606	33239227	NM_146613.1	Olfr973	NP_666824.1	ILMN_3108633	002370487	A	418	CTCTGCTTCTGGCTCACCGTGGGAGTTTACAGTTTGGGTATTGTTGGATC	9	+	39717807-39717856	9qA5.1	Mus musculus olfactory receptor 973 (Olfr973), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Olfr973-ps1; MOR171-14	Olfr973-ps1; MOR171-14
Mus musculus	RefSeq	ILMN_214295	ILMN_237841	OLFR973	NM_146613.1	NM_146613.1		258606	33239227	NM_146613.1	Olfr973	NP_666824.1	ILMN_1246942	002060743	S	508	AAGATTAATGTGATTAACCATTATTTTTGTGATCTTTTTCCTCTCTTGGA	9	+	39717897-39717946	9qA5.1	Mus musculus olfactory receptor 973 (Olfr973), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Olfr973-ps1; MOR171-14	Olfr973-ps1; MOR171-14
Mus musculus	RefSeq	ILMN_218490	ILMN_218490	ITPR1	NM_010585.3	NM_010585.3		16438	146198791	NM_010585.3	Itpr1	NP_034715.2	ILMN_1230357	001710239	S	9730	CGCCTTGTTTTGTACCTGGGTCTCGCTTTACTAGACCGTCTCTGCACAAA				6qE1-qE2	Mus musculus inositol 1,4,5-triphosphate receptor 1 (Itpr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin [goid 5955] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IPI]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system that can be controlled at will [goid 50882] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5220] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with inositol-1,4,5-triphosphate to initiate a change in cell activity [goid 8095] [evidence TAS]; Combining with inositol-1,4,5-triphosphate to initiate a change in cell activity [goid 8095] [evidence IDA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IDA]	Itpr-1; IP3R1; InsP3R; opt; Ip3r; P400; Pcp-1; D6Pas2; Pcp1	Itpr-1; IP3R1; InsP3R; opt; Ip3r; P400; Pcp-1; D6Pas2; Pcp1
Mus musculus	RefSeq	ILMN_239762	ILMN_239762	MYOCD	NM_145136.2	NM_145136.2		214384	55925596	NM_145136.2	Myocd	NP_660118.2	ILMN_3072880	007320066	I	2383	AGCCTCCATCAGCCTTTCTCTGGCACCCAAGCAGACAGCAGTCACAGTGC	11	-	65000725-65000774	11qB3	Mus musculus myocardin (Myocd), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process whereby external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time [goid 1560] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45661] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	BSAC2A; Srfcp	BSAC2A; Srfcp
Mus musculus	RefSeq	ILMN_239762	ILMN_239762	MYOCD	NM_145136.2	NM_145136.2		214384	55925596	NM_145136.2	Myocd	NP_660118.2	ILMN_3151642	006760673	A	4847	CATACAGTTTGGCCAAGGCTCTCAGAGGCTTGCTGTGGCGCCAATTCAAG	11	-	64992977-64993026	11qB3	Mus musculus myocardin (Myocd), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process whereby external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time [goid 1560] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45661] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	BSAC2A; Srfcp	BSAC2A; Srfcp
Mus musculus	RefSeq	ILMN_222143	ILMN_222143	ATP6V0A4	NM_080467.2	NM_080467.2		140494	24371245	NM_080467.2	Atp6v0a4	NP_536715.2	ILMN_1257796	000520326	S	2956	CTTCATGTGTAGTCTTCATGATCAAATACTAAAATAACTGGGAAACGGGG	6	-	37998750-37998799	6qB1	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A4 (Atp6v0a4), mRNA.	Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [evidence IPI]; A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence IPI]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence ISA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence ISA]	a4; Atp6n1b	a4; Atp6n1b
Mus musculus	Riken	ILMN_206530	ILMN_206530	MTSSK	ri|D930027C18|PX00202M11|AK086418|2316					AK086418	Mtssk		ILMN_1230369	007550220	S	2176	GGGGCACACACCTTTAATCTCAGCCCTTGGGAGGAAGAAGTGGACAGAGC										
Mus musculus	RefSeq	ILMN_195450	ILMN_252998	LOC672663	XM_001000271.1	XM_001000271.1		672663	94367961	XM_001000271.1	LOC672663	XP_001000271.1	ILMN_2515667	003990487	S	70	ACTGTGCACCCACCTGGGGAAGGAGCCTGCAGACCTTAGAACGCCTGGCT					PREDICTED: Mus musculus similar to myosin IIIA (LOC672663), mRNA.					
Mus musculus	RefSeq	ILMN_190783	ILMN_230615	GNAQ	NM_008139.5	NM_008139.5		14682	145966786	NM_008139.5	Gnaq	NP_032165.3	ILMN_2624023	001340452	S	1169	CCATCATGTTTCTAGTAGCGCTTAGCGAATATGATCAAGTTCTTGTGGAG				19qA	Mus musculus guanine nucleotide binding protein, alpha q polypeptide (Gnaq), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell [goid 21884] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; Any process that modulates the frequency, rate or extent of melanocyte differentiation [goid 45634] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	Dsk10; 6230401I02Rik; Galphaq; Dsk1; AA408290; 1110005L02Rik; Gq; AW060788	Dsk10; 6230401I02Rik; Galphaq; Dsk1; AA408290; 1110005L02Rik; Gq; AW060788
Mus musculus	RefSeq	ILMN_190783	ILMN_230615	GNAQ	NM_008139.5	NM_008139.5		14682	145966786	NM_008139.5	Gnaq	NP_032165.3	ILMN_2658443	002630224	S	3405	CAGCTCACTGTATGAACACGGACATTGCTGACTGGTAATGAAGTGCTCTC				19qA	Mus musculus guanine nucleotide binding protein, alpha q polypeptide (Gnaq), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell [goid 21884] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; Any process that modulates the frequency, rate or extent of melanocyte differentiation [goid 45634] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	Dsk10; 6230401I02Rik; Galphaq; Dsk1; AA408290; 1110005L02Rik; Gq; AW060788	Dsk10; 6230401I02Rik; Galphaq; Dsk1; AA408290; 1110005L02Rik; Gq; AW060788
Mus musculus	RefSeq	ILMN_190783	ILMN_230615	GNAQ	NM_008139.5	NM_008139.5		14682	145966786	NM_008139.5	Gnaq	NP_032165.3	ILMN_2686883	000010044	S	750	GGCCATGCAGGCCATGATCAGAGCGATGGACACGCTCAAGATCCCATACA				19qA	Mus musculus guanine nucleotide binding protein, alpha q polypeptide (Gnaq), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell [goid 21884] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; Any process that modulates the frequency, rate or extent of melanocyte differentiation [goid 45634] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]	Dsk10; 6230401I02Rik; Galphaq; Dsk1; AA408290; 1110005L02Rik; Gq; AW060788	Dsk10; 6230401I02Rik; Galphaq; Dsk1; AA408290; 1110005L02Rik; Gq; AW060788
Mus musculus	MEEBO	ILMN_209007	ILMN_209007	OLFR843	scl36180.1.1_19				22129512	NM_146567	Olfr843		ILMN_2591659	001110747	S	562	CCTGCTCTGATACTTTCATCAATACCCTTCTTATTTACACAGTGACTAGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_217466	ILMN_217466	HAMP2	NM_183257.1	NM_183257.1		66438	34304033	NM_183257.1	Hamp2	NP_899080.1	ILMN_2852624	007330482	S	272	ACCCTCCTGTGGTATCTGTTGTGAAGAATAGAGAGCCTAGAGCCACATCC	7	-	30631247-30631267:30631268-30631296	7qB1	Mus musculus hepcidin antimicrobial peptide 2 (Hamp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a fungus that act to protect the cell or organism [goid 50832] [evidence IEA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC107568; 1810073K19Rik; HEPC2	MGC107568; 1810073K19Rik; HEPC2
Mus musculus	RefSeq	ILMN_197448	ILMN_197448	LOC239017	XM_138959.3	XM_138959.3			38075901	XM_138959.3	LOC239017		ILMN_2528171	004850500	S	2793	GGTAAAGGAACGCAGCAGCCAGGGCCTGGAGCAACAAGTGGCCATCACAC										
Mus musculus	RefSeq	ILMN_184996	ILMN_242866	RBMX	NM_011252.2	NM_011252.2		19655	31981518	NM_011252.2	Rbmx	NP_035382.1	ILMN_1233065	004480292	S	1889	AAAACCAACGAGCAAACCTGAGCTCCGATGCCTAGGATGTACTGTTTACC	X	-	54639695-54639744	XqA5	Mus musculus RNA binding motif protein, X chromosome (Rbmx), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213755	ILMN_213755	FMO1	NM_010231.2	NM_010231.2		14261	31981773	NM_010231.2	Fmo1	NP_034361.1	ILMN_2838308	004640446	S	2032	CCCCTTTCCGGTTCACCTCACTGGCAGCTTGGTATTGCTGGGTCTCTTGC	1	-	164759936-164759985	1qH2.1	Mus musculus flavin containing monooxygenase 1 (Fmo1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220248	ILMN_220248	MC3R	NM_008561.2	NM_008561.2		17201	31543242	NM_008561.2	Mc3r	NP_032587.1	ILMN_2915996	006020291	S	2354	AGCAGTCACTCCCACCACTGCGGGGCAAGAAGATGCACATACAGGCTTGC	2	+	171942050-171942099	2qH3	Mus musculus melanocortin 3 receptor (Mc3r), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with melanocortin to initiate a change in cell activity [goid 4977] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC124212; MGC124211	MGC124212; MGC124211
Mus musculus	RefSeq	ILMN_197316	ILMN_197316	LOC218569	XM_138839.2	XM_138839.2			38075109	XM_138839.2	LOC218569		ILMN_2527696	002070524	S	188	GTCCCTTGGACGGCTGCATTGCTGGTGCCTTGGGTAATTGCTGGGTAAAC										
Mus musculus	RefSeq	ILMN_201464	ILMN_201464	LOC385216	XM_358124.1	XM_358124.1			38094013	XM_358124.1	LOC385216		ILMN_1245090	002120113	S	123	GAAGTTGAGCACTATGAAACCAGAGTGGAGGACTGGCACCACCGTGCAGC										
Mus musculus	RefSeq	ILMN_223403	ILMN_223403	RAB4A	NM_009003.2	NM_009003.2		19341	142388506	NM_009003.2	Rab4a	NP_033029.1	ILMN_1212902	003440041	S	1046	CAGCACAGAGCCGGTGTGACATGACAGAACCCTGCACTCAGTGAGCTTTC	8	+	126358854-126358903	8qE2	Mus musculus RAB4A, member RAS oncogene family (Rab4a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IDA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]	Rab4; AI848268	Rab4; AI848268
Mus musculus	RefSeq	ILMN_209714	ILMN_209714	CDKL3	NM_153785.3	NM_153785.3		213084	142362148	NM_153785.3	Cdkl3	NP_722480.2	ILMN_1224846	002510224	S	1456	GACGGTGTCAAAGAAGACCCACACGCTGGGGGTTGTATGATAATGCCACC	11	+	51840725-51840774	11qB1.3	Mus musculus cyclin-dependent kinase-like 3 (Cdkl3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	MGC28957; B230379H01Rik	MGC28957; B230379H01Rik
Mus musculus	MEEBO	ILMN_210998	ILMN_210998	2700033B16RIK	scl072602.2_41				51709424	XM_489058	2700033B16Rik		ILMN_2611422	004010670	S	996	CTGGAGCCCATTAACACCAGGAAGCAACCGTGGCAAGAGGCAGGCTCATT										
Mus musculus	RefSeq	ILMN_242661	ILMN_242661	OLFR524	NM_001011814.1	NM_001011814.1		258055	58801393	NM_001011814.1	Olfr524	NP_001011814.1	ILMN_3160809	000060537	S	888	CCAAGAGGTCAAGCAAGCGCTACATAAGGTACAGCAGCGAGCAGCCCAGG	7	-	147387730-147387779	7qF4	Mus musculus olfactory receptor 524 (Olfr524), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR103-14P	MOR103-14P
Mus musculus	Riken	ILMN_202644	ILMN_202644	IGF2BP1	ri|C430047N06|PX00080B21|AK021257|1109					AK021257	Igf2bp1		ILMN_2551187	001470307	S	406	CTCTCACAGGGTAACCTTGGCTGGCCTGGAACTTGCAATGTAGAGCTTGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222155	ILMN_222155	ERGIC1	NM_026170.3	NM_026170.3		67458	118129827	NM_026170.3	Ergic1	NP_080446.1	ILMN_2745433	002510348	S	2398	TGAGTTGATTCTTATTGTGTATGTAAACTGCCCCTGGCCACTTGGCTAGA	17	+	26793543-26793592	17qA3.3	Mus musculus endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 (Ergic1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		MGC102406; 1200007D18Rik	MGC102406; 1200007D18Rik
Mus musculus	RefSeq	ILMN_188767	ILMN_224957	CCDC14	NM_172824.2	NM_172824.2		239839	141803226	NM_172824.2	Ccdc14	NP_766412.1	ILMN_1241110	007000204	S	3030	TCCACTTCTTTGGAATTGACAGTAGAGCTTTTTAGCTGTCTGTCCTTAGG	16	+	34711376-34711425	16qB3	Mus musculus coiled-coil domain containing 14 (Ccdc14), mRNA.				G630039H03Rik	G630039H03Rik
Mus musculus	RefSeq	ILMN_223751	ILMN_223751	2610209M04RIK	NM_025665.1	NM_025665.1		66618	27228989	NM_025665.1	2610209M04Rik	NP_079941.1	ILMN_2860750	000520349	S	261	CAAAGAACGGCAGATCACTGAGGAAGACCTGGAGGGTAAAACAGAGGAAG	6	-	86646589-86646620:86647225-86647242	6qD1	Mus musculus RIKEN cDNA 2610209M04 gene (2610209M04Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		Ry1; AI449063; AU022368	Ry1; AI449063; AU022368
Mus musculus	RefSeq	ILMN_217420	ILMN_238899	LOC433749	XM_485435.3	XM_485435.3		433749	94372220	XM_485435.3	LOC433749	XP_485435.1	ILMN_1219914	007210670	S	748	GAGAGGTTTTTGAGATGGCCACGAGAGCTGCTCTGCAAGCTAGACGTGGG	4	-	117401352-117401401	4qD2.1	PREDICTED: Mus musculus similar to Rho family GTPase RhoA (LOC433749), mRNA.					
Mus musculus	RefSeq	ILMN_189082	ILMN_189082	TTYH1	NM_021324.4	NM_021324.4		57776	142343810	NM_021324.4	Ttyh1	NP_067299.2	ILMN_1216021	004610431	S	2763	TGTGCTACTTTCCCCTTTCGAGTACCTATTTGTTGTGGGATTTAGAGTGG	7	+	4086771-4086820	7qA1	Mus musculus tweety homolog 1 (Drosophila) (Ttyh1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The portion of the plasma membrane surrounding a filopodium [goid 31527] [evidence IDA]; The end of a filopodium distal to the body of the cell [goid 32433] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IDA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6330408P11Rik; tty; 4930459B04Rik	6330408P11Rik; tty; 4930459B04Rik
Mus musculus	RefSeq	ILMN_197669	ILMN_257140	GM567	XM_923728.3	XM_923728.3		229861	149251896	XM_923728.3	Gm567	XP_928821.1	ILMN_1257183	005870743	S	95	GTGGCTGGGGAAACCTGTTTAAATGCGGAGTGAGGGCTTCAGAGCATCTG					PREDICTED: Mus musculus gene model 567, (NCBI) (Gm567), mRNA.					
Mus musculus	RefSeq	ILMN_208960	ILMN_208960	JAM2	NM_023844.4	NM_023844.4		67374	148747503	NM_023844.4	Jam2	NP_076333.3	ILMN_2592881	001470215	S	1264	GAATTCCAGTTTTGAGCTGCACCAAAACCAGTTGTCACATGTTATTAAAA				16qC3.3	Mus musculus junction adhesion molecule 2 (Jam2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			VE-JAM; 1110002N23Rik; JAM-2; AU016127; 2410167M24Rik; JAM-B; 2410030G21Rik; Jcam2	VE-JAM; 1110002N23Rik; JAM-2; AU016127; 2410167M24Rik; JAM-B; 2410030G21Rik; Jcam2
Mus musculus	RefSeq	ILMN_196624	ILMN_196624	DAGK3	XM_155885.1	XM_155885.1			20893771	XM_155885.1	Dagk3		ILMN_1242709	002340594	S	1809	GGAGAACCTGACCGTGGCCACAACATCTGGCAGGACTCAGTGGATCCAGA										
Mus musculus	RefSeq	ILMN_220485	ILMN_220485	CHMP2B	NM_026879.2	NM_026879.2		68942	142383080	NM_026879.2	Chmp2b	NP_081155.1	ILMN_2722670	006350519	S	1485	TTACATTTTAAACTAAAACTGAGACTGAGAACAGTACCCAATCTGTCTTT	16	-	65539681-65539730	16qC1.3	Mus musculus chromatin modifying protein 2B (Chmp2b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1190006E07Rik	1190006E07Rik
Mus musculus	RefSeq	ILMN_215400	ILMN_215400	MAPKAP1	NM_177345.3	NM_177345.3		227743	61098167	NM_177345.3	Mapkap1	NP_796319.1	ILMN_1256745	002680095	S	1852	GGCAGTCCCAGCAAGACTGTACATAGCCATGCCAGACATCTCCTTGCAAC	2	+	34479304-34479353	2qB	Mus musculus mitogen-activated protein kinase associated protein 1 (Mapkap1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AI591529; D230039K05Rik	AI591529; D230039K05Rik
Mus musculus	RefSeq	ILMN_196323	ILMN_215400	MAPKAP1	NM_177345.3	NM_177345.3		227743	61098167	NM_177345.3	Mapkap1	NP_796319.1	ILMN_1233617	004230414	S	2668	GGCAGCATCCTTGGGCCAGGGCCACAGCCGATATCTTATACGACCTGTGT	2	+	34480120-34480169	2qB	Mus musculus mitogen-activated protein kinase associated protein 1 (Mapkap1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AI591529; D230039K05Rik	AI591529; D230039K05Rik
Mus musculus	RefSeq	ILMN_195165	ILMN_233401	1110015M06RIK	XM_126879.6	XM_126879.6		68511	94392523	XM_126879.6	1110015M06Rik	XP_126879.4	ILMN_1242858	001070301	S	1307	CACTCCTTCCTAATGCGTTACATGGGCTGAAAGGACAGATTTATTTTAGT	12	-	29024140-29024189	12qA2	PREDICTED: Mus musculus RIKEN cDNA 1110015M06 gene (1110015M06Rik), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]			
Mus musculus	RefSeq	ILMN_195043	ILMN_195043	USP27X	NM_019461.1	NM_019461.1		54651	29789091	NM_019461.1	Usp27x	NP_062334.1	ILMN_2512058	000290477	S	4218	AAATTCAAACTCACAGAAAATGTATAAAAATAATAAAAACACCCTTTTGC	X	-	6528240-6528289	XqA1.1	Mus musculus ubiquitin specific peptidase 27, X chromosome (Usp27x), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Sfc11	Sfc11
Mus musculus	RefSeq	ILMN_211941	ILMN_211941	ECHDC3	NM_024208.4	NM_024208.4		67856	142363495	NM_024208.4	Echdc3	NP_077170.2	ILMN_1234901	003520193	S	1114	GTGGGAAATGAATACAGGGGAGGGAACGACTTGCTAGGTCAGTGGGCAGG	2	-	6110159-6110208	2qA1	Mus musculus enoyl Coenzyme A hydratase domain containing 3 (Echdc3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2310005D12Rik; AI662097	2310005D12Rik; AI662097
Mus musculus	Riken	ILMN_204252	ILMN_204252	A830092P18RIK	ri|A830092P18|PX00156I13|AK044129|1578					AK044129	A830092P18Rik		ILMN_1248898	004560259	S	1475	GTACTTTCCCAGCTAGAAGTACATAGAATCTGCCTTCCGGGTAGTAACTG										
Mus musculus	RefSeq	ILMN_222683	ILMN_222683	SNAPC5	NM_183316.2	NM_183316.2		330959	113681193	NM_183316.2	Snapc5	NP_899139.2	ILMN_2753356	003290368	S	238	AGTGACAATAAATCAGACTACACTGAAGCTGAGCACAAGGAGCCCTATGG	9	+	64029972-64030021	9qC	Mus musculus small nuclear RNA activating complex, polypeptide 5 (Snapc5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		2010103A03Rik	2010103A03Rik
Mus musculus	RefSeq	ILMN_228979	ILMN_228979	1700123L14RIK	NM_030107.1	NM_030107.1		78482	74315958	NM_030107.1	1700123L14Rik	NP_084383.1	ILMN_2925702	005050608	S	1344	GTGTACCCGACCCACCGCTTGATAAGAAGAACGCCACCATCAAGGTCACC	6	-	96130275-96130324	6qD3	Mus musculus RIKEN cDNA 1700123L14 gene (1700123L14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214969	ILMN_214969	BBS5	NM_028284.2	NM_028284.2		72569	133892752	NM_028284.2	Bbs5	NP_082560.1	ILMN_3162388	000460541	S	1075	CACTGCAGGGACTTTGGGATGAGTTAATCTTGAATGAGTTGAGCTGGACC	2	+	69505282-69505331	2qC2	Mus musculus Bardet-Biedl syndrome 5 (human) (Bbs5), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-436E15.1; 1700049I01Rik; 2700023J09Rik	RP23-436E15.1; 1700049I01Rik; 2700023J09Rik
Mus musculus	MEEBO	ILMN_209480	ILMN_209480	5830405M20RIK	scl17137.3.1_110	XM_148997.1			20832248	XM_148997.1	5830405M20Rik		ILMN_2596209	002680373	S	1463	GCTGTGTGGTCCAAATCAGTAATGGAAATGACAGACAAGACTTCCCCATG										
Mus musculus	RefSeq	ILMN_215653	ILMN_215653	PSMA3	NM_011184.3	NM_011184.3		19167	142385658	NM_011184.3	Psma3	NP_035314.2	ILMN_2662067	004850181	S	960	TAATATTAAAATATAGATTGATGTTTGATTAAAAATTCTTAGAACTGGGC	12	+	72095520-72095569	12qC3	Mus musculus proteasome (prosome, macropain) subunit, alpha type 3 (Psma3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	Lmpc8	Lmpc8
Mus musculus	RefSeq	ILMN_210635	ILMN_210635	ENPP1	NM_008813.2	NM_008813.2		18605	12597622	NM_008813.2	Enpp1	NP_032839.2	ILMN_2782964	003290133	S	2931	GGAAACGGTCGAGTGGAGTTACAACTGGGACTCCCTGTGTGGTGTCGATG	10	-	24361460-24361509	10qA4	Mus musculus ectonucleotide pyrophosphatase/phosphodiesterase 1 (Enpp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adipocyte differentiation [goid 45599] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The continuous turnover of bone matrix and mineral that involves first, an increase in resorption (osteoclastic activity) and later, reactive bone formation (osteoblastic activity). The process of bone remodeling takes place in the adult skeleton at discrete foci. The process ensures the mechanical integrity of the skeleton throughout life and plays an important role in calcium homeostasis. An imbalance in the regulation of bone resorption and bone formation results in many of the metabolic bone diseases, such as osteoporosis [goid 46849] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [evidence IEA]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [evidence IEA]	E-NPP1; Pca; CD203c; C76301; ttw; Ly-41; M6S1; Pdnp1; Npps; twy; PC-1; NPP1; Pca-1	E-NPP1; Pca; CD203c; C76301; ttw; Ly-41; M6S1; Pdnp1; Npps; twy; PC-1; NPP1; Pca-1
Mus musculus	RefSeq	ILMN_214411	ILMN_238406	AP3B2	NM_021492.3	NM_021492.3		11775	111038138	NM_021492.3	Ap3b2	NP_067467.2	ILMN_2647729	002600162	S	3474	GCCCAGCTGACCGTCAACAGTGAGAAGATGGTGATTGGCACCATGCTGGT	7	-	88605567-88605616	7qD3	Mus musculus adaptor-related protein complex 3, beta 2 subunit (Ap3b2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Naptb; beta3B; AU042881; beta-NAP; AI549966; MGC36656; [b]-NAP	Naptb; beta3B; AU042881; beta-NAP; AI549966; MGC36656; [b]-NAP
Mus musculus	RefSeq	ILMN_238406	ILMN_238406	AP3B2	NM_021492.3	NM_021492.3		11775	111038138	NM_021492.3	Ap3b2	NP_067467.2	ILMN_3009184	007510341	S	3537	CAGGCTCTGACCCAGTGACTTCTCAGCACTGTTACCCACTGATCTTCACC	7	-	88605504-88605536:88605537-88605553	7qD3	Mus musculus adaptor-related protein complex 3, beta 2 subunit (Ap3b2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Naptb; beta3B; AU042881; beta-NAP; AI549966; MGC36656; [b]-NAP	Naptb; beta3B; AU042881; beta-NAP; AI549966; MGC36656; [b]-NAP
Mus musculus	Riken	ILMN_202846	ILMN_202846	9130604I18RIK	ri|9130604I18|PX00061L22|AK033737|1628					AK033737	9130604I18Rik		ILMN_1222505	004480554	S	1240	CCCCAGAATGAGAGACATCACTCTGTCTACAGTATCCACATGCAAAAGGG										
Mus musculus	RefSeq	ILMN_220609	ILMN_234372	BC037112	NM_001030306.1	NM_001030306.1		231128	85701587	NM_001030306.1	BC037112	NP_001025477.1	ILMN_1217423	004280711	S	2609	GAAATTATGCAGAAATGAGGGAAAAACTTCGTTTACGCCTGACTAAGAGG	5	+	34806645-34806694	5qB2	Mus musculus cDNA sequence BC037112 (BC037112), mRNA.				MGC106708	MGC106708
Mus musculus	RefSeq	ILMN_221149	ILMN_325564	LOC100047163	XR_033175.1	XR_033175.1		100047163	149256866	XR_033175.1	LOC100047163		ILMN_2776361	004120193	S	2027	CTGAGTCAGCCTTCCTCTCAGCCCTCTTCTTCTATCCCAGAAAGGACTCA					PREDICTED: Mus musculus similar to hypoxia inducible factor 3 alpha (LOC100047163), misc RNA.					
Mus musculus	Riken	ILMN_204316	ILMN_204316	6230412A12RIK	ri|6230412A12|PX00042C17|AK031763|2815					AK031763	6230412A12Rik		ILMN_1246871	005490113	S	2558	GGAGTGCAGGCTGGTATTCCAATCCAATCTAGTCTGTGCCCAGGGCTTGG										
Mus musculus	RefSeq	ILMN_216654	ILMN_232141	SBF1	XM_922598.2	XM_922598.2		77980	94399182	XM_922598.2	Sbf1	XP_927691.2	ILMN_1218323	005420541	S	5942	CCGGCCCTCGACAGTATTTGAGGCCCTGAGCCCCCCAGCACTTGTGTGTA				15qE3	PREDICTED: Mus musculus SET binding factor 1, transcript variant 15 (Sbf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Maintains the phosphorylation state of certain molecules by associating with them and preventing them from associating with active phosphatases, and thus inhibiting the enzyme activity without interacting with the enzyme. Often pertains to proteins belonging to dual-specificity phosphatase family but lacking critical active site residues [goid 1691] [evidence TAS]		
Mus musculus	RefSeq	ILMN_198247	ILMN_198247	LOC240027	XM_139756.3	XM_139756.3			38083294	XM_139756.3	LOC240027		ILMN_1234913	005050037	S	6	CAGGGTGGACCTTTTTGAACAAATACTGCCTGAACCCAGGAAGCAGAACC										
Mus musculus	RefSeq	ILMN_189894	ILMN_255398	RPGRIP1	NM_023879.2	NM_023879.2		77945	142350719	NM_023879.2	Rpgrip1	NP_076368.1	ILMN_2675776	004220441	S	2055	GGAACTTCAGTACGGCTTGATCTCCATCAGGCCATGGCTAGTGAATACCA	14	+	52765031-52765080	14qC2	Mus musculus retinitis pigmentosa GTPase regulator interacting protein 1 (Rpgrip1), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4930401L23Rik; 4930505G06Rik; A930002K18Rik; 0610005A07Rik; AA415034	4930401L23Rik; 4930505G06Rik; A930002K18Rik; 0610005A07Rik; AA415034
Mus musculus	RefSeq	ILMN_189894	ILMN_255398	RPGRIP1	NM_023879.2	NM_023879.2		77945	142350719	NM_023879.2	Rpgrip1	NP_076368.1	ILMN_2700393	004730360	S	2239	CCCTAAAACCCAGCCTCCAGGCATGCAATAAGCGAAAGAAAGCCCAGGCC	14	+	52765461-52765510	14qC2	Mus musculus retinitis pigmentosa GTPase regulator interacting protein 1 (Rpgrip1), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4930401L23Rik; 4930505G06Rik; A930002K18Rik; 0610005A07Rik; AA415034	4930401L23Rik; 4930505G06Rik; A930002K18Rik; 0610005A07Rik; AA415034
Mus musculus	RefSeq	ILMN_189894	ILMN_255398	RPGRIP1	NM_023879.2	NM_023879.2		77945	142350719	NM_023879.2	Rpgrip1	NP_076368.1	ILMN_2681694	002030019	S	2449	GCTTCTTCACCTTTCCTGACCATGACACCATCATCATTCCAGCCAGCAGC	14	+	52766997-52767046	14qC2	Mus musculus retinitis pigmentosa GTPase regulator interacting protein 1 (Rpgrip1), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4930401L23Rik; 4930505G06Rik; A930002K18Rik; 0610005A07Rik; AA415034	4930401L23Rik; 4930505G06Rik; A930002K18Rik; 0610005A07Rik; AA415034
Mus musculus	RefSeq	ILMN_200675	ILMN_245152	LOC545867	XM_916230.3	XM_916230.3		545867	149255688	XM_916230.3	LOC545867	XP_921323.2	ILMN_1228674	002340632	S	84	TGTGGCAGGACAGCTAACAGGTGTCTGGGCTCTGTGCATCCTCATCTATG				6qD3	PREDICTED: Mus musculus similar to Chain  , Calmodulin (LOC545867), mRNA.					
Mus musculus	RefSeq	ILMN_210460	ILMN_210460	DEAF1	NM_016874.1	NM_016874.1		54006	8393247	NM_016874.1	Deaf1	NP_058570.1	ILMN_1244521	001340064	S	1674	CGTCCATGTTGAAGAAAGTGTGATAGAAAAAGTTGCTGTTTGAGCCAGGC	7	-	148483393-148483410:148483411-148483442	7qF5	Mus musculus deformed epidermal autoregulatory factor 1 (Drosophila) (Deaf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AU042387; NUDR; C230009B13Rik	AU042387; NUDR; C230009B13Rik
Mus musculus	Riken	ILMN_204236	ILMN_204236	A830082I02RIK	ri|A830082I02|PX00155P24|AK044035|2032					AK044035	A830082I02Rik		ILMN_1252017	004290181	S	1598	GTCTATGGGTGTTTTCATACTAGGTGGCTACCATTACACAGGGAGAGTAG										
Mus musculus	RefSeq	ILMN_245209	ILMN_245209	1700003F12RIK	NM_029305.1	NM_029305.1		75480	110626063	NM_029305.1	1700003F12Rik	NP_083581.1	ILMN_2868440	001820358	S	195	GGGTGAGAACCCCCGCATCAAGGCTGGGAAAACCAAGATCGTGCTGCTTT				2qH1	Mus musculus RIKEN cDNA 1700003F12 gene (1700003F12Rik), mRNA. XM_976207					
Mus musculus	RefSeq	ILMN_194064	ILMN_194064	TNNC1	NM_009393.2	NM_009393.2		21924	133892226	NM_009393.2	Tnnc1	NP_033419.1	ILMN_2503052	001070452	S	515	AAGGGTGTGGAGTAGATGCTGGTCTTGCACGGTTGCCTGCGCCTGTTCTC	14	+	32024709-32024723:32024724-32024758	14qB	Mus musculus troponin C, cardiac/slow skeletal (Tnnc1), mRNA.		Any process that modulates the rate of ATP hydrolysis by an ATPase [goid 43462] [evidence IDA]; Any process that modulates the velocity of muscle filament sliding [goid 32972] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	AI874626; tncc	AI874626; tncc
Mus musculus	Riken	ILMN_206347	ILMN_206347	D430004H20RIK	ri|D430004H20|PX00193A23|AK084869|758					AK084869	D430004H20Rik		ILMN_2579432	000070092	S	374	GCGGCGCCCTGCGTCGTCTTAAGCCCCATGCAAGTGAACAGTGAGTGACT										
Mus musculus	RefSeq	ILMN_199275	ILMN_199275	LOC270533	XM_195329.1	XM_195329.1			25045065	XM_195329.1	LOC270533		ILMN_1237363	006960427	S	523	AACCTGTTGCACCTAGAAATGTCCAGGGCGATCCTGGAGGAACCTTGGTA										
Mus musculus	MEEBO	ILMN_219719	ILMN_219719	C230090D14	scl0270198.14_257	NM_173019.2			40254264	NM_173019.2	C230090D14		ILMN_2760468	007400768	S	606	AACCGGGACAGCGACGAAGCCACCGAAGACTTCATGAGGCGCATTGAATG										
Mus musculus	RefSeq	ILMN_209726	ILMN_209726	PARP2	NM_009632.2	NM_009632.2		11546	42475961	NM_009632.2	Parp2	NP_033762.1	ILMN_2598576	007400086	S	1417	ATGAACTACTGGAGGCCAATCCTAAAGCACAAGGATTGCTTCGGGGCAAG	14	+	51440489-51440538	14qC1	Mus musculus poly (ADP-ribose) polymerase family, member 2 (Parp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IDA]	Adprt2; PARP-2; Adprtl2; C78626; Aspartl2	Adprt2; PARP-2; Adprtl2; C78626; Aspartl2
Mus musculus	RefSeq	ILMN_209726	ILMN_209726	PARP2	NM_009632.2	NM_009632.2		11546	42475961	NM_009632.2	Parp2	NP_033762.1	ILMN_1226731	005310132	S	1598	CAATGAGTTTATTGTTTATAGCCCCAACCAGGTCCGTATGCGATACCTTC	14	+	51440785-51440834	14qC1	Mus musculus poly (ADP-ribose) polymerase family, member 2 (Parp2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IDA]	Adprt2; PARP-2; Adprtl2; C78626; Aspartl2	Adprt2; PARP-2; Adprtl2; C78626; Aspartl2
Mus musculus	Riken	ILMN_207310	ILMN_207310	4833406G21RIK	ri|4833406G21|PX00638F13|AK076457|1827					AK076457	4833406G21Rik		ILMN_2586632	005670707	S	1629	GGTGTGCTGCTGTGCCATGTGTGCCTATACTGCGTACTCAAACCACAGGG										
Mus musculus	RefSeq	ILMN_193964	ILMN_237001	GGN	NM_182696.2	NM_182696.2		243897	118130677	NM_182696.2	Ggn	NP_874355.1	ILMN_1237951	002970427	S	509	GCCTGGAGCACTACGACTTGCAGGCCACCCATTCTACCTGAGTGCGACTG	7	+	29958852-29958892:29958893-29958901	7qB1	Mus musculus gametogenetin (Ggn), transcript variant 3, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence NAS]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [pmid 12574169] [evidence IEP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 12574169] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IDA]	MGC102222; AI593290	MGC102222; AI593290
Mus musculus	Riken	ILMN_205926	ILMN_205926	B230312E22RIK	ri|B230312E22|PX00159C21|AK080818|1951					AK080818	B230312E22Rik		ILMN_1221236	002360110	S	1868	GTCAGCAAGAGGGTGCTGTAGAAACAAAGAGATAGTTGAGGACTGAGCCC										
Mus musculus	RefSeq	ILMN_187384	ILMN_247938	RAB12	NM_024448.2	NM_024448.2		19328	106507167	NM_024448.2	Rab12	NP_077768.2	ILMN_2443654	005810356	S	1635	TGTTTAAAGGGATTTTAAGAGTTACCTTTTAGTATATCAAAGAATACACA	17	-	66844177-66844226	17qE1.1	Mus musculus RAB12, member RAS oncogene family (Rab12), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	C77700; 2900054P15Rik; AW555448	C77700; 2900054P15Rik; AW555448
Mus musculus	RefSeq	ILMN_187384	ILMN_247938	RAB12	NM_024448.2	NM_024448.2		19328	106507167	NM_024448.2	Rab12	NP_077768.2	ILMN_1232851	004570634	S	631	CGGGATGCGCTTCTGCGAAGCCAGTGCCAAGGACAATTTCAATGTGGACG	17	-	66846721-66846770	17qE1.1	Mus musculus RAB12, member RAS oncogene family (Rab12), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	C77700; 2900054P15Rik; AW555448	C77700; 2900054P15Rik; AW555448
Mus musculus	RefSeq	ILMN_199346	ILMN_199346	LOC385303	XM_358179.1	XM_358179.1			38097260	XM_358179.1	LOC385303		ILMN_1212865	005670181	S	11	ACATACCAGAAGGCAGATGGAATTTAGCCAGGCCTACAGAGATCCCAGCC										
Mus musculus	RefSeq	ILMN_216194	ILMN_216194	SH2D3C	NM_013781.2	NM_013781.2		27387	31982734	NM_013781.2	Sh2d3c	NP_038809.1	ILMN_2668344	006290348	S	2990	GCCTCCATCTTACTGTAAATAAGTCTGGTGTAAATGTATGTACAGAAGCC	2	+	32610429-32610478	2qB	Mus musculus SH2 domain containing 3C (Sh2d3c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; The binding activity of a molecule that brings together a transmembrane receptor protein kinase and one or more other molecules, permitting them to function in a coordinated way [goid 5068] [evidence TAS]	MGC130521; Chat; Nsp3; Shep1	MGC130521; Chat; Nsp3; Shep1
Mus musculus	MEEBO	ILMN_211400	ILMN_211400	5730405M06RIK	scl0320690.1_1	NM_177229.2			31343122	NM_177229.2	5730405M06Rik		ILMN_2615475	002600762	S	1718	GGTGGCAAATATATGTGCATGGTAGTATGCATGACTATTACAATTTAGTC										
Mus musculus	RefSeq	ILMN_223667	ILMN_223667	OLFR555	NM_147103.1	NM_147103.1		259107	22128762	NM_147103.1	Olfr555	NP_667314.1	ILMN_2767446	004890048	S	630	CGATGCTCTCATCATTCTCTTCTCTTATGTACTTATCCTGAAGACAGTGC	7	+	109807966-109808015	7qE3	Mus musculus olfactory receptor 555 (Olfr555), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR10-1; MGC129232; MGC129233	MOR10-1; MGC129232; MGC129233
Mus musculus	RefSeq	ILMN_198549	ILMN_248512	EG210457	XM_911003.1	XM_911003.1		210457	83000317	XM_911003.1	EG210457	XP_916096.1	ILMN_1231833	004010291	S	1121	CCACAGTGTGCTTCCTATGCTCATACTGCAAGAAGTGTCTTTTTGGGGAG				XqA3.2	PREDICTED: Mus musculus predicted gene, EG210457 (EG210457), mRNA.					
Mus musculus	MEEBO	ILMN_224172	ILMN_224172	RDH11	scl42308.7_397				19482171	NM_021557	Rdh11		ILMN_1241278	005670224	S	3062	CCAAGGGTGTCAGGAATCCCTCATGTTCCCATCACTGGTTTGGAGGATGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214602	ILMN_214602	2810038L03RIK	scl16833.1.228_261				51704941	XM_484853	2810038L03Rik		ILMN_2649753	000840672	S	1098	GGAGCGGTCTCATGCAAAATGTCTTCCTGGAAAATTGTTTGGTAGTGTCC										
Mus musculus	RefSeq	ILMN_229630	ILMN_229630	DEF8	NM_054046.2	NM_054046.2		23854	31560006	NM_054046.2	Def8	NP_473387.1	ILMN_2987678	002570561	S	3267	CGGGTGGGTATGAAGAGTCTAGCCAGCAACCGAAGCCCATTTGGATGGCT	8	+	126349500-126349549	8qE1	Mus musculus differentially expressed in FDCP 8 (Def8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D8Ertd713e; AI449518	D8Ertd713e; AI449518
Mus musculus	RefSeq	ILMN_223205	ILMN_223205	OLFR1195	NM_146753.1	NM_146753.1		258748	22129338	NM_146753.1	Olfr1195	NP_666964.1	ILMN_2760733	001440156	S	682	GCTGAGGGGAGGAGAAAAGCTCTGTTCACTTGTGTCTCTCATATCATAGT	2	-	88523156-88523205	2qD	Mus musculus olfactory receptor 1195 (Olfr1195), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR230-4	MOR230-4
Mus musculus	RefSeq	ILMN_222710	ILMN_222710	LCE3C	NM_033175.2	NM_033175.2		94060	142371396	NM_033175.2	Lce3c	NP_149410.1	ILMN_2753750	007040079	S	389	ACAGTCTGGAGGAATCAGCATCCCAGGGGTCAAGAAAAGCCCAGCTAGTC	3	+	92749477-92749526	3qF1	Mus musculus late cornified envelope 3C (Lce3c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Eig3; 2300007B01Rik; Sprrl1; AV076207	Eig3; 2300007B01Rik; Sprrl1; AV076207
Mus musculus	RefSeq	ILMN_201225	ILMN_201225	LOC384951	XM_357957.1	XM_357957.1			38089954	XM_357957.1	LOC384951		ILMN_1243222	005860184	S	12	ATATGCCACCTGCAGCAGCCACCCCCAGCTCTTTGTCACGGAAGCTGAGA										
Mus musculus	RefSeq	ILMN_187357	ILMN_224582	DNAJC1	NM_007869.2	NM_007869.2		13418	118131142	NM_007869.2	Dnajc1	NP_031895.1	ILMN_1219284	000110674	S	1415	GATATATCAGAACAAAACGATTCCAGTGACGAAGAGAAACAACGAAAAGA	2	-	18141210-18141259	2qA3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 1 (Dnajc1), mRNA.	The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence TAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IDA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Modulates the activity of a molecular chaperone [goid 30188] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IDA]; Interacting selectively with any part of a ribosome [goid 43022] [evidence TAS]	4733401K02Rik; D230036H06Rik; ERdj1; AA960110; Dnajl1; MTJ1	4733401K02Rik; D230036H06Rik; ERdj1; AA960110; Dnajl1; MTJ1
Mus musculus	Riken	ILMN_206406	ILMN_206406	PER	ri|C130078P18|PX00171B08|AK081813|3471					AK081813	Per		ILMN_1249997	005860661	S	3117	GGCAGGACAAGTATCCAGGCTGGCATGGCCTGAGGGATTTTGGCAGATGA										
Mus musculus	RefSeq	ILMN_222666	ILMN_222666	AVIL	NM_009635.2	NM_009635.2		11567	24475908	NM_009635.2	Avil	NP_033765.1	ILMN_2753149	001190427	S	2705	CCTTTCGAAGTCATCCTTGCATTCCTTGTGGCTGTCCATTAGATGCTGAC	10	+	126457752-126457801	10qD3	Mus musculus advillin (Avil), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DOC6; Advil	DOC6; Advil
Mus musculus	RefSeq	ILMN_221862	ILMN_221862	POU2AF1	NM_011136.2	NM_011136.2		18985	118130242	NM_011136.2	Pou2af1	NP_035266.1	ILMN_1228328	001690392	S	1905	GTCTCCTAGTGCTTTGCTCCTGAAGTGGATGTGTCTTTGGGAACTGGCCC	9	+	51047523-51047572	9qA5.3	Mus musculus POU domain, class 2, associating factor 1 (Pou2af1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	OBF.1; Bob1; OBF-1; OCAB; BOB.1; Bob-1; OCA-B	OBF.1; Bob1; OBF-1; OCAB; BOB.1; Bob-1; OCA-B
Mus musculus	RefSeq	ILMN_196672	ILMN_240136	KCNK6	NM_001033525.2	NM_001033525.2		52150	141802767	NM_001033525.2	Kcnk6	NP_001028697.1	ILMN_1258376	006620521	S	3928	AGTGCCTGACCCGTCCCTCGATCTGAACTCTGTTCTTAGCAAGGAAGGTC	7	-	30007029-30007078	7qB1	Mus musculus potassium inwardly-rectifying channel, subfamily K, member 6 (Kcnk6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	D7Ertd764e; Toss; Twik2	D7Ertd764e; Toss; Twik2
Mus musculus	RefSeq	ILMN_200793	ILMN_240136	KCNK6	NM_001033525.2	NM_001033525.2		52150	141802767	NM_001033525.2	Kcnk6	NP_001028697.1	ILMN_1232178	003890504	S	1477	CAGAGCCCAAGCCACATCTACTACTGTGTGCCTAGCACAGAAAAGCATGG	7	-	30009480-30009529	7qB1	Mus musculus potassium inwardly-rectifying channel, subfamily K, member 6 (Kcnk6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	D7Ertd764e; Toss; Twik2	D7Ertd764e; Toss; Twik2
Mus musculus	Riken	ILMN_203624	ILMN_203624	C330029I24RIK	ri|C330029I24|PX00077E01|AK049367|3087					AK049367	C330029I24Rik		ILMN_2558723	007550577	S	133	GGCGGTGGCCGAGCTCTACGCGCAGTACAACAGGGTTTGGATCCCAGATC										
Mus musculus	MEEBO	ILMN_186772	ILMN_186772	SCL0003507.1_0	scl0003507.1_0	XM_284491.2			38090327	XM_284491.2	scl0003507.1_0		ILMN_2438375	007320369	S	3	ACCAGCATGTCAGTTGCATATAAATACTAGAGACACACTTGCCCAACTGG										
Mus musculus	RefSeq	ILMN_188405	ILMN_228670	PDZD8	NM_001033222.2	NM_001033222.2		107368	142368577	NM_001033222.2	Pdzd8	NP_001028394.1	ILMN_1234324	003060224	S	3244	CAGAGGCTTGCCGACAGAAGAGAGGATCCAGAAGCTGGAGTTCATGTTGG	19	-	59374356-59374405	19qD3	Mus musculus PDZ domain containing 8 (Pdzd8), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW228944; Pdzk8; A630041P07Rik; AV329468	AW228944; Pdzk8; A630041P07Rik; AV329468
Mus musculus	RefSeq	ILMN_244680	ILMN_244680	CTDSPL2	NM_212450.1	NM_212450.1		329506	47059058	NM_212450.1	Ctdspl2	NP_997615.1	ILMN_3075774	006060324	I	4122	CCAGCCTGTCAGTGCACACAGCACACATGACTATAGTAAATGCAGGGGCC	2	+	121704604-121704653	2qE5	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 (Ctdspl2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D2Ertd485e	D2Ertd485e
Mus musculus	RefSeq	ILMN_244680	ILMN_244680	CTDSPL2	NM_212450.1	NM_212450.1		329506	47059058	NM_212450.1	Ctdspl2	NP_997615.1	ILMN_3154869	004290196	A	874	TACAGCACCAGTAACTCCAGAGAGTGGGTACTCGTCAGCCCATGCAGAGG	2	+	121672802-121672805:121678390-121678435	2qE5	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 (Ctdspl2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D2Ertd485e	D2Ertd485e
Mus musculus	RefSeq	ILMN_253678	ILMN_253678	FRMD6	NM_028127.3	NM_028127.3		319710	34328509	NM_028127.3	Frmd6	NP_082403.2	ILMN_2828916	001110719	S	4371	GGAAAGTATAAAGCCGTCACTCACGCTGCACTTGCTAGCGTGTCCATGGC	12	+	72002930-72002979	12qC2-qC3	Mus musculus FERM domain containing 6 (Frmd6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2610019M19Rik; 4930488L10Rik; AW212977	2610019M19Rik; 4930488L10Rik; AW212977
Mus musculus	RefSeq	ILMN_196967	ILMN_196967	LOC380770	XM_358422.1	XM_358422.1			38050478	XM_358422.1	LOC380770		ILMN_1237030	007050739	S	651	GCTCCTCGGAGAGATCCTTCCCCACCCGACACTCGGTTTTGAGAGATTGC										
Mus musculus	RefSeq	ILMN_209344	ILMN_209344	CMA1	NM_010780.1	NM_010780.1		17228	6857811	NM_010780.1	Cma1	NP_034910.1	ILMN_1225727	002650056	S	537	CTTTATCCCACCCGGGAGAATGTGCAGGGCAGTTGGCTGGGGCAGAACAA	14	-	54896339-54896388	14qC3	Mus musculus chymase 1, mast cell (Cma1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Mcpt5; MMCP-5; Mcp-5	Mcpt5; MMCP-5; Mcp-5
Mus musculus	RefSeq	ILMN_209344	ILMN_209344	CMA1	NM_010780.1	NM_010780.1		17228	6857811	NM_010780.1	Cma1	NP_034910.1	ILMN_2997068	004210039	S	640	GGAGCCCCAAGCCTGCAAACACTTCACCAGTTTTCGACACAATTCCCAGC	14	-	54896236-54896285	14qC3	Mus musculus chymase 1, mast cell (Cma1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Mcpt5; MMCP-5; Mcp-5	Mcpt5; MMCP-5; Mcp-5
Mus musculus	RefSeq	ILMN_221260	ILMN_221260	SP7	NM_130458.1	NM_130458.1		170574	18485517	NM_130458.1	Sp7	NP_569725.1	ILMN_2733114	005260619	S	2727	CCAGTGACTTTTAAAGCCGCTTTGTGCCTTTGAAATGCCTTTCCTGAGAT	15	-	102184780-102184829	15qF3	Mus musculus trans-acting transcription factor 7 (Sp7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]	Osx; 6430578P22Rik; MGC130562; C22	Osx; 6430578P22Rik; MGC130562; C22
Mus musculus	RefSeq	ILMN_218343	ILMN_237009	COMT	NM_007744.2	NM_007744.2		12846	142352293	NM_007744.2	Comt	NP_031770.1	ILMN_1248478	007610678	S	1116	CCACTACAATACCCCTGGAAAACACCTGTGCATCAAAGGCTGCATTGAGG	16	-	18411593-18411642	16qA3	Mus musculus catechol-O-methyltransferase (Comt), mRNA.				D16Wsu103e; D330014B15Rik	D16Wsu103e; D330014B15Rik
Mus musculus	RefSeq	ILMN_218343	ILMN_237009	COMT	NM_007744.2	NM_007744.2		12846	142352293	NM_007744.2	Comt	NP_031770.1	ILMN_2694577	004760259	S	101	TGCCCTTCGCACTGCCTGAGCGTCCGCGCCTCGGGGTCAGACCTGTGCGC	16	-	18427254-18427303	16qA3	Mus musculus catechol-O-methyltransferase (Comt), mRNA.				D16Wsu103e; D330014B15Rik	D16Wsu103e; D330014B15Rik
Mus musculus	Riken	ILMN_201718	ILMN_201718	2400010C15RIK	ri|2400010C15|ZX00041K17|AK010307|638					AK010307	2400010C15Rik		ILMN_1247777	004900735	S	544	CGATGGCATCGTGGCCGACTGACAGCGGCTCTGTTCAACTTGTATTTAAA										
Mus musculus	Riken	ILMN_204076	ILMN_204076	A730023M06RIK	ri|A730023M06|PX00149L06|AK042776|1386					AK042776	A730023M06Rik		ILMN_1238065	000870487	S	1179	TCAGACCAGAGTTCGTGCTCAGCTACATGGCTAGTTTGAGGCCAGTCTGG										
Mus musculus	MEEBO	ILMN_210763	ILMN_210763	2900060N12RIK	scl0073031.1_316	NM_183095.1			34147064	NM_183095.1	2900060N12Rik		ILMN_2608903	002120725	S	989	GCCTGGCGTGGCAGGGGATGGGCCTCCTCCTTTATAAGCACAGACTCTTA										
Mus musculus	RefSeq	ILMN_198383	ILMN_198383	LOC381192	XM_358524.1	XM_358524.1			38084783	XM_358524.1	LOC381192		ILMN_1215143	001780056	S	511	GATCCAGGTCCCACAGAGGTCTTCACTGTCTCCTACCCCACATGATCACC										
Mus musculus	RefSeq	ILMN_216764	ILMN_216764	BC020002	NM_145374.1	NM_145374.1		252875	21703749	NM_145374.1	BC020002	NP_663349.1	ILMN_1220980	001440133	S	2955	GGATGTCCTTCATAGTTCAGGAAATAAAGTCACTCATGGCTTTGCTGTCG	6	+	8185526-8185575	6qA1	Mus musculus cDNA sequence BC020002 (BC020002), mRNA.				C81488; MGC25527	C81488; MGC25527
Mus musculus	RefSeq	ILMN_221268	ILMN_221268	AV320801	XM_284742.5	XM_284742.5		331531	94408269	XM_284742.5	AV320801	XP_284742.2	ILMN_2733241	004730709	S	3630	TTATAATGCTTTCTTGTTAACATCACATTATCTTGTCATCTTTGAGTAAG	X	+	132039065-132039114	XqF1	PREDICTED: Mus musculus expressed sequence AV320801 (AV320801), mRNA.					
Mus musculus	RefSeq	ILMN_199410	ILMN_199410	OLFR478	NM_146734.1	NM_146734.1		258729	22129376	NM_146734.1	Olfr478	NP_666945.1	ILMN_2828082	005260100	S	479	GGTCTTTCACTATATGTTTCTATTCGTTAGTCTTCTGTGGACCCAATGGT	7	-	115175327-115175376	7qE3	Mus musculus olfactory receptor 478 (Olfr478), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-13	MOR204-13
Mus musculus	RefSeq	ILMN_199410	ILMN_199410	OLFR478	NM_146734.1	NM_146734.1		258729	22129376	NM_146734.1	Olfr478	NP_666945.1	ILMN_2535130	001410722	S	181	CCCATGTACTTTTTCCTCAGCCACTTGGCTTTTGCTGACATAGGTTACTC	7	-	115175625-115175674	7qE3	Mus musculus olfactory receptor 478 (Olfr478), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-13	MOR204-13
Mus musculus	RefSeq	ILMN_199410	ILMN_199410	OLFR478	NM_146734.1	NM_146734.1		258729	22129376	NM_146734.1	Olfr478	NP_666945.1	ILMN_2740015	004260561	S	572	CCTGTTCCGATGTCAGTGTCCCTGCAACTGTTCCTTCATTCACAGCTGGA	7	-	115175234-115175283	7qE3	Mus musculus olfactory receptor 478 (Olfr478), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-13	MOR204-13
Mus musculus	RefSeq	ILMN_220920	ILMN_220920	CALR3	NM_029782.3	NM_029782.3		73316	141803185	NM_029782.3	Calr3	NP_084058.2	ILMN_1222104	006060181	S	1260	CCCTGCATAGAACAGATCATTGAAAGCCAGAGACCTATAAGAATCTGGCC	8	-	74948143-74948192	8qB3.3	Mus musculus calreticulin 3 (Calr3), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	6330586I20Rik; Crt2; 1700031L01Rik	6330586I20Rik; Crt2; 1700031L01Rik
Mus musculus	RefSeq	ILMN_210255	ILMN_220920	CALR3	NM_029782.3	NM_029782.3		73316	141803185	NM_029782.3	Calr3	NP_084058.2	ILMN_1232231	005420730	S	929	GCGAACTATAGTCATCCTCACTCTGCATGCTGAGTGGCCCAGCTGCAACT	8	-	74948474-74948513:74948514-74948523	8qB3.3	Mus musculus calreticulin 3 (Calr3), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	6330586I20Rik; Crt2; 1700031L01Rik	6330586I20Rik; Crt2; 1700031L01Rik
Mus musculus	RefSeq	ILMN_223603	ILMN_223603	2900092C05RIK	NM_028434.1	NM_028434.1		73090	33469012	NM_028434.1	2900092C05Rik	NP_082710.1	ILMN_3004538	003370736	S	346	GTATAGCCTTTGTCATTGCCCTGCTATGTGGGCTCATGCTCTCCTACGTG	7	+	11456394-11456443	7qA1	Mus musculus RIKEN cDNA 2900092C05 gene (2900092C05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217739	ILMN_242413	MAGEA8	NM_020020.3	NM_020020.3		17144	142362870	NM_020020.3	Magea8	NP_064404.1	ILMN_2687002	005900609	S	787	GTCCACTCCTATATGCTTGTCACTGCCCTGGGGATCACCTATGATGGCAT	X	-	151421127-151421176	XqF3	Mus musculus melanoma antigen, family A, 8 (Magea8), mRNA.				Mage-a8	Mage-a8
Mus musculus	RefSeq	ILMN_208613	ILMN_242413	MAGEA8	NM_020020.3	NM_020020.3		17144	142362870	NM_020020.3	Magea8	NP_064404.1	ILMN_2770293	001050356	S	181	CCTGGTAAAGCAGAGTTTAACTAGAGTCATCAGAGGGAAGATCTCAGGAG	X	-	151422668-151422717	XqF3	Mus musculus melanoma antigen, family A, 8 (Magea8), mRNA.				Mage-a8	Mage-a8
Mus musculus	RefSeq	ILMN_196082	ILMN_246443	CCDC109A	NM_001033259.2	NM_001033259.2		215999	141803154	NM_001033259.2	Ccdc109a	NP_001028431.1	ILMN_2533766	002060048	S	903	TGACCGTGAATCCCGGCAGAGAGTGCGCCTGTTTGTAACTCACGCCGTTT	10	-	58911471-58911520	10qB4	Mus musculus coiled-coil domain containing 109A (Ccdc109a), mRNA. XM_918871	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2010012O16Rik; D130073L02Rik; AV064928; C10orf42; Gm64	2010012O16Rik; D130073L02Rik; AV064928; C10orf42; Gm64
Mus musculus	RefSeq	ILMN_199216	ILMN_312874	LOC100042456	XM_001479295.1	XM_001479295.1		100042456	149262537	XM_001479295.1	LOC100042456	XP_001479345.1	ILMN_1254476	001070148	S	535	CACTGCAGATGACCTTGCCCAAAACAGCAAGTACAGCGGGCCAAGCTGAC	11	+	102541899-102541948	11qE1	PREDICTED: Mus musculus hypothetical protein LOC100042456 (LOC100042456), mRNA.					
Mus musculus	RefSeq	ILMN_239015	ILMN_239015	DEFA-PS1	NR_003146.1	NR_003146.1		727720	112734829	NR_003146.1	Defa-ps1		ILMN_2984391	004850414	S	82	GAGACTAATACTGAGGAGCAGCCAGGGAAAGAAGACCAAGCTGTTTCTGT					Mus musculus defensin, alpha, pseudogene 1 (Defa-ps1), non-coding RNA.				Defcr-ps26; Defcr-ps1; Crypi	Defcr-ps26; Defcr-ps1; Crypi
Mus musculus	RefSeq	ILMN_210120	ILMN_210120	TJAP1	NM_028751.2	NM_028751.2		74094	27229172	NM_028751.2	Tjap1	NP_083027.1	ILMN_2934448	001500192	S	2303	AGCTCTGGTTGGTAGGGGAGGGTGTCGTTGGTGCTGCTGACCTCTATTCC	17	-	46395029-46395078	17qC	Mus musculus tight junction associated protein 1 (Tjap1), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	AW121008; AI415281; 0610041D19Rik; Pilt; Tjp4	AW121008; AI415281; 0610041D19Rik; Pilt; Tjp4
Mus musculus	RefSeq	ILMN_210120	ILMN_210120	TJAP1	NM_028751.2	NM_028751.2		74094	27229172	NM_028751.2	Tjap1	NP_083027.1	ILMN_2656465	004900360	S	2191	TCTCCAAGGTAACAAGTCATTTGGGCCCCAAGCTCTTCCACCATCCAGTC	17	-	46395141-46395190	17qC	Mus musculus tight junction associated protein 1 (Tjap1), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	AW121008; AI415281; 0610041D19Rik; Pilt; Tjp4	AW121008; AI415281; 0610041D19Rik; Pilt; Tjp4
Mus musculus	RefSeq	ILMN_210120	ILMN_210120	TJAP1	NM_028751.2	NM_028751.2		74094	27229172	NM_028751.2	Tjap1	NP_083027.1	ILMN_2602435	003460632	S	178	CTGTCTGTTTTTATGGAGTGCCTGGAGGGCGTCTGCCATGAGTCTGTTGC	17	-	46408799-46408848	17qC	Mus musculus tight junction associated protein 1 (Tjap1), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	AW121008; AI415281; 0610041D19Rik; Pilt; Tjp4	AW121008; AI415281; 0610041D19Rik; Pilt; Tjp4
Mus musculus	MEEBO	ILMN_213739	ILMN_213739	1500003O03RIK	scl0056398.1_113	NM_019769.2			31542386	NM_019769.2	1500003O03Rik		ILMN_1250000	006560593	S	132	ACGGTGATGGGGTCTCGGGCCTCCACGTTATTGCGGGACGAAGAGCTCGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217744	ILMN_217744	NEK7	scl16219.11_255	NM_021605.2			31981203	NM_021605.2	Nek7		ILMN_2687046	006380008	S	3283	TCCATTGTGTAGAAACAAATTCAGTGTGATGTTTGCAAGTGGTTATGGAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_254468	ILMN_254468	OLFR1333	NM_207157.1	NM_207157.1		258265	46391066	NM_207157.1	Olfr1333	NP_997040.1	ILMN_2827876	006250646	S	763	CCAGCCAGTTACATTTACATGAGGCCGAACTCCAGCTACTCCCCTGAGCA	4	-	118502231-118502280	4qD2.1	Mus musculus olfactory receptor 1333 (Olfr1333), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC157582; MOR259-11; MOR259-6	MGC157582; MOR259-11; MOR259-6
Mus musculus	RefSeq	ILMN_192725	ILMN_330451	ZFP518	NM_028319.1	NM_028319.1		72672	133507239	NM_028319.1	Zfp518	NP_082595.1	ILMN_2490746	005420598	S	6265	TAAATTTGCACAAGAAGTTTATGACACAAAAAGTATTTTCTTTTTAGTTC	19	+	40991862-40991911	19qC3	Mus musculus zinc finger protein 518 (Zfp518), mRNA. XM_925057 XM_976746	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0335; 2810401C22Rik; AI426493; mKIAA0335; 6330417C12Rik	KIAA0335; 2810401C22Rik; AI426493; mKIAA0335; 6330417C12Rik
Mus musculus	RefSeq	ILMN_210267	ILMN_330451	ZFP518	NM_028319.1	NM_028319.1		72672	133507239	NM_028319.1	Zfp518	NP_082595.1	ILMN_2603862	004850192	S	1248	CACCTGTGTTTTACCAAGGGAGAGCTGCAGAAGCACCTTCGTGTCCACTC	19	+	40986845-40986894	19qC3	Mus musculus zinc finger protein 518 (Zfp518), mRNA. XM_925057 XM_976746	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0335; 2810401C22Rik; AI426493; mKIAA0335; 6330417C12Rik	KIAA0335; 2810401C22Rik; AI426493; mKIAA0335; 6330417C12Rik
Mus musculus	RefSeq	ILMN_215408	ILMN_215408	HC	NM_010406.1	NM_010406.1		15139	6754163	NM_010406.1	Hc	NP_034536.1	ILMN_2659143	000870411	S	5285	TGTTGGTTGGGGCCGGAAGAAGAGACCCACTGAAACTGTAGCCCCTTATC	2	-	34838919-34838968	2qB	Mus musculus hemolytic complement (Hc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow [goid 5579] [evidence IEA]	The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway [goid 6956] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C5a; He; C5	C5a; He; C5
Mus musculus	RefSeq	ILMN_223120	ILMN_225105	HINT2	NM_026871.1	NM_026871.1		68917	110625718	NM_026871.1	Hint2	NP_081147.1	ILMN_2759598	005310110	S	519	CCACAGGCCTGGATGCTTGGACGGAGAATGGGAAAAGGAACCTTGTGGTG	4	-	43667121-43667170	4qB1	Mus musculus histidine triad nucleotide binding protein 2 (Hint2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	1190005L05Rik	1190005L05Rik
Mus musculus	RefSeq	ILMN_189311	ILMN_189311	WDR1	NM_011715.2	NM_011715.2		22388	118130065	NM_011715.2	Wdr1	NP_035845.1	ILMN_2460168	006590376	S	1819	AGACGAACACACACTGGTCACCACCTCCCATGACGCCTCTGTGAAGGAGT	5	-	38919061-38919110	5qB3	Mus musculus WD repeat domain 1 (Wdr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISA]	D5Wsu185e	D5Wsu185e
Mus musculus	RefSeq	ILMN_189311	ILMN_189311	WDR1	NM_011715.2	NM_011715.2		22388	118130065	NM_011715.2	Wdr1	NP_035845.1	ILMN_2497268	004890270	S	2758	GCGTGTGTCGGAATCACTGGTAAATGTTGGCTGAGAACAATCCCTCCCCT	5	-	38918122-38918171	5qB3	Mus musculus WD repeat domain 1 (Wdr1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence ISA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISA]	D5Wsu185e	D5Wsu185e
Mus musculus	Riken	ILMN_203748	ILMN_203748	A130002I06RIK	ri|A130002I06|PX00120I09|AK037271|3793					AK037271	A130002I06Rik		ILMN_2559680	002260427	S	2866	GGCAAGCATGTCCAACCCCTTGAGATGTGTGCCTTCAGTCTCTAAATAGC										
Mus musculus	MEEBO	ILMN_188245	ILMN_188245	UBE2H	scl0022214.2_142	XM_133034.1			20915189	XM_133034.1	Ube2h		ILMN_2451035	002370523	S	2	TGATTAGGAGGGTTTCTGCTGGCCCTGCAGCTTGCTTCCCTGCGGATTAG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191755	ILMN_247691	P4HA3	NM_177161.3	NM_177161.3		320452	37674233	NM_177161.3	P4ha3	NP_796135.2	ILMN_2644175	004830541	S	1425	GAGGAGCCACGGCTTTTATCTATGGCAACTTCAGTGTGCCTGTGGTTAAG	7	+	107465571-107465620	7qE3	Mus musculus procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III (P4ha3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2 [goid 4656] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC99449; D930031A02Rik	MGC99449; D930031A02Rik
Mus musculus	RefSeq	ILMN_222247	ILMN_222247	CTR9	NM_009431.2	NM_009431.2		22083	154090952	NM_009431.2	Ctr9	NP_033457.2	ILMN_1246471	007570544	S	3944	ACTGCAGTGATAACACAGATGCTAAAGCATTCCCAAGGCTTGCAAGCCAG				7qF1	Mus musculus Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (Ctr9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence IDA]	KIAA0155; Tsbp; Tsp; AA409336; Sh2bp1; mKIAA0155	KIAA0155; Tsbp; Tsp; AA409336; Sh2bp1; mKIAA0155
Mus musculus	RefSeq	ILMN_213281	ILMN_213281	CD4	NM_013488.2	NM_013488.2		12504	133892562	NM_013488.2	Cd4	NP_038516.1	ILMN_1249663	000610367	S	2624	GGCAGAGATCTTGAGAGGATGGAGGAGCCATTCTGGTTTCAAATCCCTCC	6	-	124816256-124816262:124816215-124816257	6qF2	Mus musculus CD4 antigen (Cd4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which T cells that express T cell receptors that are restricted by self MHC protein complexes and tolerant to self antigens are selected for further maturation [goid 45058] [evidence ISS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	L3T4; Ly-4	L3T4; Ly-4
Mus musculus	RefSeq	ILMN_208653	ILMN_208653	POR	NM_008898.1	NM_008898.1		18984	6679420	NM_008898.1	Por	NP_032924.1	ILMN_2629266	000070685	S	1226	TACGCCTCAGAGCCCTCGGAGCAGGAACACCTGCACAAGATGGCGTCCTC	5	+	136209488-136209537	5qG2	Mus musculus P450 (cytochrome) oxidoreductase (Por), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IMP]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + n oxidized hemoprotein = NADP+ + n reduced hemoprotein [goid 3958] [evidence IEA]	CPR; 4933424M13Rik; CYPOR	CPR; 4933424M13Rik; CYPOR
Mus musculus	RefSeq	ILMN_208653	ILMN_208653	POR	NM_008898.1	NM_008898.1		18984	6679420	NM_008898.1	Por	NP_032924.1	ILMN_1232447	000730110	S	2366	CCACAGAGCTGGGGTGCAGCCCCAACATGTGATTTTGAATGAGTGTAAAT	5	+	136211104-136211153	5qG2	Mus musculus P450 (cytochrome) oxidoreductase (Por), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IMP]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + n oxidized hemoprotein = NADP+ + n reduced hemoprotein [goid 3958] [evidence IEA]	CPR; 4933424M13Rik; CYPOR	CPR; 4933424M13Rik; CYPOR
Mus musculus	RefSeq	ILMN_208653	ILMN_208653	POR	NM_008898.1	NM_008898.1		18984	6679420	NM_008898.1	Por	NP_032924.1	ILMN_2791272	002070563	S	2346	TACAGAAGGGGCTCTTCTCTCCACAGAGCTGGGGTGCAGCCCCAACATGT	5	+	136211084-136211133	5qG2	Mus musculus P450 (cytochrome) oxidoreductase (Por), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IMP]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + n oxidized hemoprotein = NADP+ + n reduced hemoprotein [goid 3958] [evidence IEA]	CPR; 4933424M13Rik; CYPOR	CPR; 4933424M13Rik; CYPOR
Mus musculus	MEEBO	ILMN_191921	ILMN_191921	1190005N23RIK	scl068937.1_113						1190005N23Rik		ILMN_2483405	004150129	S	4	GCACTCGTGGGGATGTGTACTGTCAAAAGTTGGGCAAATGCTGAAACCTC										
Mus musculus	RefSeq	ILMN_197220	ILMN_197220	LOC381365	XM_355330.1	XM_355330.1			38074644	XM_355330.1	LOC381365		ILMN_2527341	001990465	S	313	CCTGAAGCATGTGGTCTTTGGGAAGGTGAAAGAAGGCATGAACATTGTGG										
Mus musculus	RefSeq	ILMN_208706	ILMN_208706	CAR14	NM_011797.1	NM_011797.1		23831	6753263	NM_011797.1	Car14	NP_035927.1	ILMN_2973824	005870220	S	1138	GGGTCTAGGTGTGGGAATCTTGGCTGGATGTCTTTGCCTTCTGCTGGCTG	3	-	95984230-95984279	3qF2.1	Mus musculus carbonic anhydrase 14 (Car14), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	AW536446	AW536446
Mus musculus	RefSeq	ILMN_213929	ILMN_216450	MYO1B	NM_010863.2	NM_010863.2		17912	86990449	NM_010863.2	Myo1b	NP_034993.2	ILMN_2642375	005270025	S	2602	CGCTTGAAGGAGGAGGCTAGGCGTAAGCATGCAGTTGCTGTCATTTGGGC	1	-	51823684-51823733	1qC1.1	Mus musculus myosin IB (Myo1b), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	myosin-1b; AA406997	myosin-1b; AA406997
Mus musculus	RefSeq	ILMN_216450	ILMN_216450	MYO1B	NM_010863.2	NM_010863.2		17912	86990449	NM_010863.2	Myo1b	NP_034993.2	ILMN_2671235	004920215	S	4369	GAAACTGCATGATAAGAAGAGGCTGAGAGCCGTTCAGACTGGCAGATCTT	1	-	51807123-51807172	1qC1.1	Mus musculus myosin IB (Myo1b), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	myosin-1b; AA406997	myosin-1b; AA406997
Mus musculus	RefSeq	ILMN_197708	ILMN_246685	CSMD3	XM_484467.4	XM_484467.4		239420	94398568	XM_484467.4	Csmd3	XP_484467.3	ILMN_2529089	000360484	S	221	AGCCTGGCACGCGAAGATGCGCTAAATGTGGCCGCCTAGACTTCATCCTG				15qB3.3	PREDICTED: Mus musculus CUB and Sushi multiple domains 3, transcript variant 2 (Csmd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]				
Mus musculus	MEEBO	ILMN_185806	ILMN_185806	PSMB3	scl40954.3.1_30				31981321	NM_011971	Psmb3		ILMN_2430164	001780593	S	11	CAACCAGATAGGAACAAGAGGGCTGACGTCAGGGAACCCAGAGAGCCATG						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence ISO]		
Mus musculus	RefSeq	ILMN_231404	ILMN_231404	C330001K17RIK	NM_029939.1	NM_029939.1		77609	58037494	NM_029939.1	C330001K17Rik	NP_084215.1	ILMN_2987394	006380131	S	1849	ACCGTGATGTGGTGACCCGCGCTGCCTTCAAGCTCCGTTCCCAGAAGTTA	9	-	21740571-21740620	9qA3	Mus musculus RIKEN cDNA C330001K17 gene (C330001K17Rik), mRNA.				AI644415	AI644415
Mus musculus	Riken	ILMN_206310	ILMN_206310	PEX3	ri|D130007G21|PX00182D15|AK083778|2960					AK083778	Pex3		ILMN_1216484	003710193	S	2799	TAAAACAATGCCTGCAGGATGGCTCTGTAGGTAAAGGCGCCTGCTGCCCC						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]			
Mus musculus	RefSeq	ILMN_201419	ILMN_201419	LOC385133	XM_358076.1	XM_358076.1			38093595	XM_358076.1	LOC385133		ILMN_2542230	004830601	S	11	AGAACAGCAAACTGGGTCCTGAGGCCAACTTCTTCCCCTACAGAGATTCC										
Mus musculus	RefSeq	ILMN_247190	ILMN_247190	EG214321	NM_001038995.2	NM_001038995.2		214321	111955130	NM_001038995.2	EG214321	NP_001034084.2	ILMN_3160344	000580324	S	2161	GTAGTGTAAACAGTGGCCCTATAACTAACCCTCTGAAGAGATATCGAGCC	12	-	82478263-82478312	12qD1	Mus musculus predicted gene, EG214321 (EG214321), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Adam4b	Adam4b
Mus musculus	MEEBO	ILMN_192205	ILMN_192205	C130045I22RIK	scl45310.1.376_30						C130045I22Rik		ILMN_2485964	007160360	S	17	ACCTTCATCCCTTCACCTGTTCTGTGAGGTCCCACTCTGGTTTGAGGAAG										
Mus musculus	RefSeq	ILMN_215781	ILMN_215781	MMP21	NM_152944.1	NM_152944.1		214766	23308682	NM_152944.1	Mmp21	NP_694423.1	ILMN_1223199	004280221	S	1590	CTGGAAAGTAGTTAGTGACAAGGACAAACAGCAGAACACCCGGCTGCCTC	7	-	140866171-140866220	7qF3	Mus musculus matrix metallopeptidase 21 (Mmp21), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence ISO]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC124282; MGC124281	MGC124282; MGC124281
Mus musculus	RefSeq	ILMN_215807	ILMN_261329	MAP4K3	NM_001081357.1	NM_001081357.1		225028	124486874	NM_001081357.1	Map4k3	NP_001074826.1	ILMN_2663805	004070689	S	3756	GCTGAGGAGTCCGCACTAGACATTTCACAGTCACACTGAAGAGCTGTCAC	17	-	80980277-80980326	17qE3	Mus musculus mitogen-activated protein kinase kinase kinase kinase 3 (Map4k3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Glk; 9530052P13Rik; RAB8IPL1; 4833416M07Rik; MAPKKKK3; 4833416M01Rik	Glk; 9530052P13Rik; RAB8IPL1; 4833416M07Rik; MAPKKKK3; 4833416M01Rik
Mus musculus	RefSeq	ILMN_211747	ILMN_211747	TMEM50B	NM_030018.2	NM_030018.2		77975	31542166	NM_030018.2	Tmem50b	NP_084294.1	ILMN_2671286	001010669	S	1877	TACTCCCTCTCACACTCGCTGCACAGTTAGGTGTGCTGGGGGAAGTGACC	16	-	91463662-91463711	16qC3.3	Mus musculus transmembrane protein 50B (Tmem50b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			B230114J08Rik; AU015466; AU019872	B230114J08Rik; AU015466; AU019872
Mus musculus	RefSeq	ILMN_211089	ILMN_211089	MAK10	NM_030153.1	NM_030153.1		78689	21644570	NM_030153.1	Mak10	NP_084429.1	ILMN_2828599	006840300	S	2246	GATGACCGTGTCCACTCTAGGGAAGACATCAGTCTGCCACACATGGTGAC	13	+	59735852-59735901	13qB2	Mus musculus MAK10 homolog, amino-acid N-acetyltransferase subunit, (S. cerevisiae) (Mak10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The multiplication or reproduction of smooth muscle cells, resulting in the expansion of a cell population [goid 48659] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C030004C14Rik; A330021G12Rik; A330027C19Rik; AI158944	C030004C14Rik; A330021G12Rik; A330027C19Rik; AI158944
Mus musculus	RefSeq	ILMN_211089	ILMN_211089	MAK10	NM_030153.1	NM_030153.1		78689	21644570	NM_030153.1	Mak10	NP_084429.1	ILMN_2612403	000020112	S	1912	TTTGCACCGTTCAACAGTGTGATGACGCCGCCACCAGTGCACTACCTGCA	13	+	59731445-59731494	13qB2	Mus musculus MAK10 homolog, amino-acid N-acetyltransferase subunit, (S. cerevisiae) (Mak10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The multiplication or reproduction of smooth muscle cells, resulting in the expansion of a cell population [goid 48659] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C030004C14Rik; A330021G12Rik; A330027C19Rik; AI158944	C030004C14Rik; A330021G12Rik; A330027C19Rik; AI158944
Mus musculus	RefSeq	ILMN_208659	ILMN_208659	LRRC61	NM_177736.2	NM_177736.2		243371	31343159	NM_177736.2	Lrrc61	NP_808404.1	ILMN_2770447	003420608	S	90	CCACCCTCTACTCCTAGAGCTCATCATTCCTGAAGATCTGTTCCAAAAGA	6	+	48507012-48507061	6qB2.3	Mus musculus leucine rich repeat containing 61 (Lrrc61), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC027309; MGC28139	BC027309; MGC28139
Mus musculus	RefSeq	ILMN_210215	ILMN_237668	ATP11C	NM_001001798.2	NM_001001798.2		320940	83745142	NM_001001798.2	Atp11c	NP_001001798.1	ILMN_2719451	006330364	S	1899	CCATGTGGAACGTAATGCAATGGATGGGTATCGGACTCTTTGTGTAGCCT	X	-	57529938-57529966:57530554-57530574	XqA6	Mus musculus ATPase, class VI, type 11C (Atp11c), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Ig; MGC117487; A330005H02Rik	Ig; MGC117487; A330005H02Rik
Mus musculus	RefSeq	ILMN_200742	ILMN_245748	LOC665427	XM_976860.1	XM_976860.1		665427	94379353	XM_976860.1	LOC665427	XP_981954.1	ILMN_1223044	000240181	S	88	GAAGCAGGCACATCCGACCCCTTGGAGGAAGTTTTTTCCGGCGTGCTCTC	7	-	6882488-6882537		PREDICTED: Mus musculus hypothetical protein LOC665427 (LOC665427), mRNA.					
Mus musculus	RefSeq	ILMN_209820	ILMN_209820	CYHR1	NM_019396.2	NM_019396.2		54151	118130778	NM_019396.2	Cyhr1	NP_062269.1	ILMN_2599522	005670373	S	1114	GCTGCTGGCCGCCAAGAACATTAACCTGCGGCTCTTCCTGTTCCAGATAC	15	-	76476948-76476997	15qD3	Mus musculus cysteine and histidine rich 1 (Cyhr1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU042374; 1110031M01Rik; Chrp	AU042374; 1110031M01Rik; Chrp
Mus musculus	RefSeq	ILMN_200107	ILMN_226343	LOC665012	XR_001681.1	XR_001681.1		665012	94374833	XR_001681.1	LOC665012		ILMN_2537621	006520132	S	375	GCAAGGATGTAGGGTGAATGACTCCCAGGTCAATGCCCTCCTACCTGGAT	5	+	77078191-77078240		PREDICTED: Mus musculus similar to PRAME family member 9 (LOC665012), mRNA.					
Mus musculus	RefSeq	ILMN_254395	ILMN_254395	ZFP619	NM_001004139.1	NM_001004139.1		70227	51921278	NM_001004139.1	Zfp619	NP_001004139.1	ILMN_2895753	002370224	S	5445	GCCTACTAACAGCTCCTTGAAGCACCTCAGCTCACACACAAGACTTGCTG	7	+	46795266-46795315	7qB3	Mus musculus zinc finger protein 619 (Zfp619), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	3000002G13Rik; MGC91101	3000002G13Rik; MGC91101
Mus musculus	RefSeq	ILMN_211565	ILMN_254395	ZFP619	NM_001004139.1	NM_001004139.1		70227	51921278	NM_001004139.1	Zfp619	NP_001004139.1	ILMN_2617174	001190240	S	5616	TACTAGATTAACTTATCTTTCCATTATACTGTAGAGTTTACCTTTAAAAG	7	+	46795437-46795486	7qB3	Mus musculus zinc finger protein 619 (Zfp619), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	3000002G13Rik; MGC91101	3000002G13Rik; MGC91101
Mus musculus	RefSeq	ILMN_217715	ILMN_217715	TAP2	NM_011530.2	NM_011530.2		21355	46399205	NM_011530.2	Tap2	NP_035660.2	ILMN_2686721	004490017	S	2232	CCGTGCCGGAGGAGGCTAGGGTCAGGATAAAGATTGGGACCGTTTTGGAC	17	+	34348996-34349045	17qB1	Mus musculus transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) (Tap2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class Ib molecule. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family [goid 2481] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [evidence IMP]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15197] [evidence IEA]	Ham-2; AI462429; Abcb3; APT2; Tap-2; Y1; MTP2; RING11; PSF2; ABC18; jas; Ham2	Ham-2; AI462429; Abcb3; APT2; Tap-2; Y1; MTP2; RING11; PSF2; ABC18; jas; Ham2
Mus musculus	RefSeq	ILMN_237483	ILMN_237483	GPR139	NM_001024138.1	NM_001024138.1		209776	66571296	NM_001024138.1	Gpr139	NP_001019309.1	ILMN_2894266	004260736	S	819	CTTCTTTCTCTACTGCTTCATCAGCAAGCGCTTCCGTACCATGGCAGCTG	7	-	126288006-126288055	7qF2	Mus musculus G protein-coupled receptor 139 (Gpr139), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IDA]	Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [evidence IDA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	GPRg1; PGR3; Gm495	GPRg1; PGR3; Gm495
Mus musculus	RefSeq	ILMN_198774	ILMN_237483	GPR139	NM_001024138.1	NM_001024138.1		209776	66571296	NM_001024138.1	Gpr139	NP_001019309.1	ILMN_1242034	000540377	S	714	CATGATTCTCTACCACCTCTACGGAGCACCCATCCAGAACCCTTGGCTGG	7	-	126288111-126288160	7qF2	Mus musculus G protein-coupled receptor 139 (Gpr139), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IDA]	Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [evidence IDA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IDA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	GPRg1; PGR3; Gm495	GPRg1; PGR3; Gm495
Mus musculus	Riken	ILMN_206025	ILMN_206025	C230095J06RIK	ri|C230095J06|PX00177J01|AK049052|1895					AK049052	C230095J06Rik		ILMN_2576984	007160039	S	1690	GTTTGTGTGTGATTTGGAAATTGCAAGTGGGGTTGGGGTGGATGGAGCAC										
Mus musculus	RefSeq	ILMN_241780	ILMN_241780	SEPT10	NM_001024910.1	NM_001024910.1		103080	67906192	NM_001024910.1	Sept10	NP_001020081.1	ILMN_3105231	001240487	A	1472	GCAGCGGGTCAAGGAGAAAGAAGCCATTCTGAAGGAAGCGGAAAGAGAGC	10	-	58562046-58562048:58566171-58566217	10qB4	Mus musculus septin 10 (Sept10), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921515A04Rik; AI874685; AA408298; 9430099J10Rik	4921515A04Rik; AI874685; AA408298; 9430099J10Rik
Mus musculus	RefSeq	ILMN_241780	ILMN_241780	SEPT10	NM_001024910.1	NM_001024910.1		103080	67906192	NM_001024910.1	Sept10	NP_001020081.1	ILMN_3031845	000770592	I	1732	GCGACTGCTTAACAGCACAAGAGAGCGTGAGACTGTGTATTTCTTCCCCG	10	-	58537023-58537072	10qB4	Mus musculus septin 10 (Sept10), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921515A04Rik; AI874685; AA408298; 9430099J10Rik	4921515A04Rik; AI874685; AA408298; 9430099J10Rik
Mus musculus	Riken	ILMN_205442	ILMN_205442	E330024P20RIK	ri|E330024P20|PX00212M16|AK054432|2523					AK054432	E330024P20Rik		ILMN_2572589	006840187	S	2339	GCAGGTAAAGGGGAGGACCACCACCACCGCTAAAAAAAAATGAGGCTGGG										
Mus musculus	RefSeq	ILMN_184862	ILMN_228494	SEC23A	NM_009147.2	NM_009147.2		20334	67906176	NM_009147.2	Sec23a	NP_033173.2	ILMN_1213958	001980072	S	1806	GAGGAAGGGCCAGACGTGCTAAGATGGTTGGACAGACAACTCATTCGACT	12	-	60079449-60079498	12qC1	Mus musculus SEC23A (S. cerevisiae) (Sec23a), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state [goid 30127] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Msec23; Sec23r	Msec23; Sec23r
Mus musculus	RefSeq	ILMN_222845	ILMN_222845	COCH	NM_007728.2	NM_007728.2		12810	31982455	NM_007728.2	Coch	NP_031754.1	ILMN_2919201	006200431	S	2235	ACCAGCCAAGAACAGACAGCTGTTATTATGTGCACTAGCCATAACTACAC	12	+	52527059-52527108	12qC1	Mus musculus coagulation factor C homolog (Limulus polyphemus) (Coch), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Coch-5B2; AW122937; D12H14S564E	Coch-5B2; AW122937; D12H14S564E
Mus musculus	RefSeq	ILMN_200409	ILMN_200409	LOC383205	XM_356922.1	XM_356922.1			38081714	XM_356922.1	LOC383205		ILMN_1229857	006100037	S	1	ATGTGGGAGCAGCCAGCTGAGGACGATAGAATCTTTCAACTAGTGGTAGC										
Mus musculus	RefSeq	ILMN_224030	ILMN_316959	LOC100044129	XM_001478948.1	XM_001478948.1		100044129	149262586	XM_001478948.1	LOC100044129	XP_001478998.1	ILMN_2773467	004890524	S	3781	CTGGGAAACCAGAGACTGGTGGAGGAGGGGCTGGTCATGAGGAATGCTTT	11	-	101047741-101047790		PREDICTED: Mus musculus similar to Ezh1 protein (LOC100044129), mRNA.					
Mus musculus	RefSeq	ILMN_196505	ILMN_196505	5730598B06	XM_135809.3	XM_135809.3			28527896	XM_135809.3	5730598B06		ILMN_1257953	002030288	S	1096	GTGTTGGGCTTCGGGGATTAAACTCAGATTGTCAGGCTTGGCTCGTGCCC										
Mus musculus	MEEBO	ILMN_184603	ILMN_184603	9230112G11RIK	scl078084.2_67						9230112G11Rik		ILMN_2420006	001570201	S	9	GGTGTTAGGGACGACTTCAGTGTGCAGAGCAGCACCCTCAGACTTTTGGC										
Mus musculus	RefSeq	ILMN_222722	ILMN_222722	SCGB3A2	NM_054038.1	NM_054038.1		117158	16905070	NM_054038.1	Scgb3a2	NP_473379.1	ILMN_2835481	007100731	S	367	CCCTGGGAGAAGCCTTTGCTACGTGAACAACCTCCCATCATTTGTAAGTG	18	+	43926578-43926627	18qB3	Mus musculus secretoglobin, family 3A, member 2 (Scgb3a2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Pnsp1; UGRP1; Utgrp1; LuLeu1	Pnsp1; UGRP1; Utgrp1; LuLeu1
Mus musculus	RefSeq	ILMN_222722	ILMN_222722	SCGB3A2	NM_054038.1	NM_054038.1		117158	16905070	NM_054038.1	Scgb3a2	NP_473379.1	ILMN_2753867	006520593	S	250	CCTGGGCATTTCTGTAGAACATCTGGTGACAGGACTGAAGAAGTGTGTGG	18	+	43926461-43926510	18qB3	Mus musculus secretoglobin, family 3A, member 2 (Scgb3a2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Pnsp1; UGRP1; Utgrp1; LuLeu1	Pnsp1; UGRP1; Utgrp1; LuLeu1
Mus musculus	MEEBO	ILMN_187870	ILMN_187870	ABL1	scl21073.15_402				33859503	NM_009594	Abl1		ILMN_1243738	005220615	S	69	GTTTGAAGTTGGTGGGCTGCAAATCCAAGAAGGGGCTCTCTTCGTCCTCC						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212387	ILMN_212387	OLFR437	NM_146296.1	NM_146296.1		258293	22129692	NM_146296.1	Olfr437	NP_666408.1	ILMN_2625840	004010369	S	617	TAGTTGGACCCCTTTGCTCAATGCTTGTATCTTACACGCACATCCTCTGG	6	+	43117675-43117724	6qB2.1	Mus musculus olfactory receptor 437 (Olfr437), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR261-11	MOR261-11
Mus musculus	RefSeq	ILMN_198165	ILMN_312891	LOC674720	XR_031098.1	XR_031098.1		674720	149272191	XR_031098.1	LOC674720		ILMN_1249940	005420154	S	905	AAATGCCGACCCTGACACCCCCAAAGAAGTGAAAGAGACCGAAGCACATG					PREDICTED: Mus musculus similar to Armcx5 protein (LOC674720), misc RNA.					
Mus musculus	RefSeq	ILMN_194776	ILMN_194776	UBA5	NM_025692.2	NM_025692.2		66663	141803582	NM_025692.2	Uba5	NP_079968.1	ILMN_1216388	006860601	S	1247	GGTCCTGTTCCCACCTTACCTGAAGGCATTACAGTGGCATACACAGTCCC	9	-	103951570-103951619	9qF1	Mus musculus ubiquitin-like modifier activating enzyme 5 (Uba5), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AW240750; 5730525G14Rik	AW240750; 5730525G14Rik
Mus musculus	RefSeq	ILMN_199666	ILMN_227049	LOC545487	XM_619852.3	XM_619852.3		545487	94367661	XM_619852.3	LOC545487	XP_619852.2	ILMN_2536053	006550452	S	210	GAGGAACCAGAGCGAATGCCCAACAGTCAACCTGGATAAACTGTGGATGT	2	+	174888125-174888174	2qH4	PREDICTED: Mus musculus similar to ribosomal protein L27a-like (LOC545487), mRNA.					
Mus musculus	RefSeq	ILMN_241011	ILMN_241011	OLFR1322	NM_001011794.1	NM_001011794.1		257978	58801353	NM_001011794.1	Olfr1322	NP_001011794.1	ILMN_3161926	003140242	S	652	TGCACCATTCTGAGGATCCCTTCGACCACAGGGAAGCAGAGGGCTTTCTC	X	-	47238877-47238926	XqA5	Mus musculus olfactory receptor 1322 (Olfr1322), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR264-16P	MOR264-16P
Mus musculus	RefSeq	ILMN_220964	ILMN_220964	4933427D14RIK	NM_028963.2	NM_028963.2		74477	118130566	NM_028963.2	4933427D14Rik	NP_083239.1	ILMN_1245850	006860446	S	4171	CCTCGGAAAGGACATCAAGGGACTCATAGGTCTTCAGTCTGGAGAGTTAA	11	-	71967710-71967759	11qB4	Mus musculus RIKEN cDNA 4933427D14 gene (4933427D14Rik), mRNA.				RP23-207N15.3; C85113	RP23-207N15.3; C85113
Mus musculus	MEEBO	ILMN_219724	ILMN_219724	FAIM2	scl072393.1_30	NM_028224.2			34328311	NM_028224.2	Faim2		ILMN_2712740	006980414	S	1356	GATCTCAGAGGTGGGGAGGAGACCCCAGGAAACCTGGCTGTGACTGTGAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]			
Mus musculus	RefSeq	ILMN_215724	ILMN_215724	OLFR679	NM_147044.1	NM_147044.1		259046	22128866	NM_147044.1	Olfr679	NP_667255.1	ILMN_1234776	003180528	S	594	CAACCGTCTTTATCAGTTTGCTATAGGCTGGACTTTGCTGGGATCAGACC	7	+	112234825-112234874	7qE3	Mus musculus olfactory receptor 679 (Olfr679), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR40-2	MOR40-2
Mus musculus	Riken	ILMN_204624	ILMN_204624	LOC55933	ri|C530022I01|PX00081H06|AK049675|2317					AK049675	LOC55933		ILMN_1248395	002600167	S	1968	CAGAGACTGGGGTATTTGTTTTATGGGATCAGGGTCCTCCCCAAGTGCGG										
Mus musculus	MEEBO	ILMN_190270	ILMN_190270	ZNF142	scl000822.1_10				14193746	AF332092	Znf142		ILMN_1236966	003400670	S	19	CTTCTGTGAGCGCTGTGAACAGAGCTTTGCAGAGCCTACTCTGCTCTCCG										
Mus musculus	MEEBO	ILMN_220715	ILMN_220715	BC027582	scl21735.2.1_5	NM_183192.1			34147255	NM_183192.1	BC027582		ILMN_2725736	002230458	S	606	CAGAAGAATGAAAACATAGATTCCGGTGTGTATCAACTAAAGGGCAGCAG										
Mus musculus	RefSeq	ILMN_210043	ILMN_210043	SCN3B	NM_178227.4	NM_178227.4		235281	144922642	NM_178227.4	Scn3b	NP_839941.1	ILMN_1227604	005900474	S	1517	ACCTGACTTCCGGACTCTATCAGAACTCCTATACATCTTGACCTTGCCTG	9	+	40096479-40096528	9qA5.1	Mus musculus sodium channel, voltage-gated, type III, beta (Scn3b), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	Scnb3; 4833414B02Rik; 1110001K16Rik	Scnb3; 4833414B02Rik; 1110001K16Rik
Mus musculus	RefSeq	ILMN_255013	ILMN_210043	SCN3B	NM_178227.4	NM_178227.4		235281	144922642	NM_178227.4	Scn3b	NP_839941.1	ILMN_3163577	001940632	A	802	ACACCGGCCCTTTGTGAAGACCACAAGACTAATACCCCTGCGAGTCACTG	9	+	40087130-40087179	9qA5.1	Mus musculus sodium channel, voltage-gated, type III, beta (Scn3b), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	Scnb3; 4833414B02Rik; 1110001K16Rik	Scnb3; 4833414B02Rik; 1110001K16Rik
Mus musculus	RefSeq	ILMN_210043	ILMN_210043	SCN3B	NM_178227.4	NM_178227.4		235281	144922642	NM_178227.4	Scn3b	NP_839941.1	ILMN_1215136	005810592	S	3188	AGCTGTGAACTTGGTTACTCGGTTGGGCCTGAAAGCATCTTGCCCTGTTG	9	+	40098150-40098199	9qA5.1	Mus musculus sodium channel, voltage-gated, type III, beta (Scn3b), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	Scnb3; 4833414B02Rik; 1110001K16Rik	Scnb3; 4833414B02Rik; 1110001K16Rik
Mus musculus	RefSeq	ILMN_201329	ILMN_201329	LOC382454	XM_356516.1	XM_356516.1			38090951	XM_356516.1	LOC382454		ILMN_1255829	005080008	S	589	GAAGGAAGAGAAGGATGTAGCAGGAAAGCCGAGGGCAGACTCGGAGGTGG										
Mus musculus	MEEBO	ILMN_187514	ILMN_187514	0610031G08RIK	scl075393.1_11						0610031G08Rik		ILMN_2444799	002070347	S	19	GGAAGACCAGAGAGTTGCCTCGACGTTGTTCACCTAAATCCGTGGCGGGC										
Mus musculus	MEEBO	ILMN_210247	ILMN_210247	ARHGAP12	scl075415.1_214	NM_029277.1			26986538	NM_029277.1	Arhgap12		ILMN_1227256	000130647	S	3825	TGACACTGCGAAATTTGAGTATTTCCTTTTTACATTACTACTGTAGATTG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_220634	ILMN_220634	PEX5	scl0001083.1_32	NM_008995.1			6679580	NM_008995.1	Pex5		ILMN_2724676	003610091	S	690	GAGTCGGCTGCAGGGTCGGGCGGAGCTCAGGCAGAACAGTGGGCAGCAGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IMP]; The process of directing proteins towards the peroxisome using signals contained within the protein [goid 6625] [evidence TAS]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IMP]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IMP]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IMP]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex [goid 21895] [evidence IMP]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IMP]	Interacting selectively with a peroxisomal targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome [goid 268] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_202541	ILMN_202541	2410153K17RIK	ri|2410153K17|ZX00082K07|AK010815|1417					AK010815	2410153K17Rik		ILMN_2550391	006110424	S	1283	GCCCTGTTCTGTACCACAGAGTGGCTGAGAAATGAGGCCTGACCATCTGT										
Mus musculus	RefSeq	ILMN_199248	ILMN_199248	LOC270552	XM_195432.1	XM_195432.1			25032795	XM_195432.1	LOC270552		ILMN_2534564	001230148	S	247	GGAGACAGTGTGGTCAGTAGAAGTGATGGAGAGAGTGTGATCACTATGAG										
Mus musculus	RefSeq	ILMN_215474	ILMN_215474	ACAA1B	NM_146230.3	NM_146230.3		235674	118130202	NM_146230.3	Acaa1b	NP_666342.1	ILMN_2659997	004780528	S	1523	GTGGGCACTGGGGCATCCAATCCGGTTCTCTCGGTCGAACCAAAGACAGT	9	-	119057257-119057306	9qF3	Mus musculus acetyl-Coenzyme A acyltransferase 1B (Acaa1b), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	MGC29978	MGC29978
Mus musculus	RefSeq	ILMN_209279	ILMN_209279	ERN2	NM_012016.2	NM_012016.2		26918	124248582	NM_012016.2	Ern2	NP_036146.2	ILMN_1214511	006590270	S	2859	CAGGCGTGACAGAAAAGATGGGCAGCGGTCTAAGGGACTCAGGCTGTTAA	7	-	129313471-129313520	7qF3	Mus musculus endoplasmic reticulum (ER) to nucleus signalling 2 (Ern2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16891] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MGC124363; Ire1; Ern1; MGC124364; Ire1b	MGC124363; Ire1; Ern1; MGC124364; Ire1b
Mus musculus	RefSeq	ILMN_217188	ILMN_217188	D0H4S114	NM_053078.3	NM_053078.3		27528	33186876	NM_053078.3	D0H4S114	NP_444308.1	ILMN_2680054	007040243	S	1914	GCGCTGCCGAAAATGCAGGCTTTTGTAACGTGGTCCTCTCATAAGTACCC	18	-	33596730-33596779	18qB1	Mus musculus DNA segment, human D4S114 (D0H4S114), mRNA.		Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI325076; PTZ17; SEZ17; P311	AI325076; PTZ17; SEZ17; P311
Mus musculus	Riken	ILMN_204587	ILMN_204587	C130034B06RIK	ri|C130034B06|PX00168P21|AK048092|1965					AK048092	C130034B06Rik		ILMN_1246705	004610619	S	1242	GCCTCCCAAGAGGTAAGAAGCCCATCACATCCTGCTGTAGCATGTTCTTG										
Mus musculus	Riken	ILMN_203795	ILMN_203795	A230077G12RIK	ri|A230077G12|PX00129H03|AK038938|2951					AK038938	A230077G12Rik		ILMN_1220332	000780070	S	2388	CTCTCTGCCCTTCAGCATGACAAGAGGTGAGAGAGCTCAAGACAGGGTTA										
Mus musculus	RefSeq	ILMN_209116	ILMN_209116	SORCS1	NM_021377.1	NM_021377.1		58178	12025517	NM_021377.1	Sorcs1	NP_067352.1	ILMN_2592695	004120035	S	2967	CGAACTTGGATGACTACAACCCTGACATCCCGGAGTGGAGGAGGGACATC	19	-	50250582-50250631	19qD1	Mus musculus VPS10 domain receptor protein SORCS 1 (Sorcs1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Sorcs	Sorcs
Mus musculus	RefSeq	ILMN_209116	ILMN_209116	SORCS1	NM_021377.1	NM_021377.1		58178	12025517	NM_021377.1	Sorcs1	NP_067352.1	ILMN_1227591	001410475	S	2965	CTCCGAACTTGGATGACTACAACCCTGACATCCCGGAGTGGAGGAGGGAC	19	-	50250584-50250633	19qD1	Mus musculus VPS10 domain receptor protein SORCS 1 (Sorcs1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Sorcs	Sorcs
Mus musculus	RefSeq	ILMN_209116	ILMN_209116	SORCS1	NM_021377.1	NM_021377.1		58178	12025517	NM_021377.1	Sorcs1	NP_067352.1	ILMN_2827617	004060273	S	3319	CCATGCTGATGTTGCTCTCTGTGGTGTTTGTGGGGCTCGCTGTATTCGTC	19	-	50227563-50227612	19qD1	Mus musculus VPS10 domain receptor protein SORCS 1 (Sorcs1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Sorcs	Sorcs
Mus musculus	RefSeq	ILMN_213516	ILMN_213516	DHDDS	NM_026144.2	NM_026144.2		67422	27754092	NM_026144.2	Dhdds	NP_080420.2	ILMN_2637850	003850646	S	2663	GCCCTACAATTAAGGCGGGAATGAGAGGCTGGAGGCAGCAAACGGAATCT	4	-	133241530-133241579	4qD3	Mus musculus dehydrodolichyl diphosphate synthase (Dhdds), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HDS; W91638; 3222401G21Rik; DS	HDS; W91638; 3222401G21Rik; DS
Mus musculus	RefSeq	ILMN_221773	ILMN_221773	ST8SIA3	NM_009182.2	NM_009182.2		20451	50053987	NM_009182.2	St8sia3	NP_033208.2	ILMN_2740115	001050053	S	1208	CTCTGTCACACTGTGCCTAAGAACTCCAAATGGAAAGTGCCAAACGGCTG	18	+	64431431-64431450:64431451-64431480	18qE1	Mus musculus ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 (St8sia3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IDA]	ST8SiaIII; Siat8c; AI847333	ST8SiaIII; Siat8c; AI847333
Mus musculus	RefSeq	ILMN_189328	ILMN_199424	LDB3	NM_011918.4	NM_011918.4		24131	122056485	NM_011918.4	Ldb3	NP_036048.3	ILMN_1250896	002570360	S	1069	CCGCTGCTGCCTCTCCCATTGCGGCCTCGCCAACCCTGGCCACAGCTGCT	14	-	35368590-35368639	14qB	Mus musculus LIM domain binding 3 (Ldb3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with protein kinase C [goid 5080] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271	PDLIM6; MGC118603; cypher 2; ZASP; cypher 1; AW742271
Mus musculus	Riken	ILMN_203176	ILMN_203176	EVC	ri|A330104K03|PX00064E07|AK039759|3697					AK039759	Evc		ILMN_1251157	005220327	S	3473	AAGTCCATATTGTGCTTCCTAAGCCAGGAGGGCGGGTGTGGTTGAGGGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_217873	ILMN_217873	EPHA2	NM_010139.2	NM_010139.2		13836	32484982	NM_010139.2	Epha2	NP_034269.2	ILMN_2688653	000940546	S	3290	CATCCCCTGAGGCTAAAGTTCCACCAAGACCGTCGATATCGACGAGGGAC	4	+	140884676-140884725	4qE1	Mus musculus Eph receptor A2 (Epha2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The series of molecular signals generated as a consequence of an ephrin receptor binding to an ephrin [goid 48013] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	AW545284; Sek-2; Eck; Myk2; Sek2	AW545284; Sek-2; Eck; Myk2; Sek2
Mus musculus	Riken	ILMN_204328	ILMN_204328	GUKMI1	ri|6030411A16|PX00056D06|AK031353|3346					AK031353	Gukmi1		ILMN_2564133	001240110	S	2972	ATGAAGTGGCAGGAAGACAGAATGGATAAAAGCATCCACCCCAGCTCTGG										
Mus musculus	Riken	ILMN_206931	ILMN_206931	NF1	ri|D430030F20|PX00194D14|AK085050|3854					AK085050	Nf1		ILMN_1218872	001010148	S	3355	TGCCTTTGAGATGGATCCCGATTTGGGCTGGTCACTGGACCTCCTCAGAG						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity [goid 45762] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IGI]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone tissue loss (resorption) [goid 45124] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of glia cell differentiation [goid 45685] [evidence IMP]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IGI]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Ras protein signal transduction [goid 46580] [evidence IMP]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IGI]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IGI]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of astrocyte differentiation [goid 48712] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence ISO]; Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation [goid 1937] [evidence ISO]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [evidence IGI]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IGI]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IGI]; The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [goid 48485] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of astrocyte differentiation [goid 48712] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IGI]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus [goid 42992] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Rac protein signal transduction [goid 35021] [evidence IGI]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte differentiation [goid 48715] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a neurotransmitter [goid 46929] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a neurotransmitter [goid 46929] [evidence IGI]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence IMP]; Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation [goid 1937] [evidence IMP]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence IGI]; The process aimed at the progression of a Schwann cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14044] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IMP]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22011] [evidence IMP]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The process by which the anatomical structures of the forebrain are generated and organized. Morphogenesis pertains to the creation of form. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 48853] [evidence IMP]; The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues [goid 21510] [evidence IMP]; Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32228] [evidence IGI]; Any process that activates or increases the activity of a GTPase of the Ras superfamily [goid 32320] [evidence IMP]; Any process that activates or increases the activity of a GTPase of the Ras superfamily [goid 32320] [evidence ISO]; A series of reactions, mediated by the intracellular phosphoinositide 3-kinase (PI3K). PI3K cascades lie downstream of many cell surface receptor linked signaling pathways and regulate numerous cellular functions [goid 14065] [evidence IMP]; The process aimed at the progression of an astrocyte that resides in the forebrain, from initial commitment of the cell to its fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function [goid 21897] [evidence IMP]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IMP]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IMP]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IGI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISO]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_223594	ILMN_223594	4933414I15RIK	scl074408.1_1	NM_028911.1			21312715	NM_028911.1	4933414I15Rik		ILMN_2766213	002230593	S	2663	AATGAAGTTATTTATTTTGGGAATAACCTACATGGTCAGATTTTTTCTTA										
Mus musculus	RefSeq	ILMN_216595	ILMN_216595	COL4A2	NM_009932.2	NM_009932.2		12827	36031079	NM_009932.2	Col4a2	NP_034062.2	ILMN_2822579	002260551	S	5840	GATAGCTGAGCTCACTGACCCATTTCCACCCAAGGATGCATGCAGTGTGC	8	+	11448896-11448945	8qA1.1	Mus musculus collagen, type IV, alpha 2 (Col4a2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]	canstatin; Col4a-2; MGC7371; AU019502	canstatin; Col4a-2; MGC7371; AU019502
Mus musculus	RefSeq	ILMN_201111	ILMN_201111	LOC382009	XM_356075.1	XM_356075.1			38089228	XM_356075.1	LOC382009		ILMN_2541126	006660059	S	669	ACAAACCTAACATTCTGGATTTAGTCTTCAACACTGGGGGTGGGGGAGGT										
Mus musculus	MEEBO	ILMN_221929	ILMN_221929	GABRB1	scl27736.9.1_26	NM_008069.2			24475611	NM_008069.2	Gabrb1		ILMN_2742197	001050491	S	1863	GCCTTCCAGTTGGTTTTCGATCTTGTGTGTCAGTTTTTATTATCACACCA						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209540	ILMN_209540	SHPK	NM_029031.3	NM_029031.3		74637	124286807	NM_029031.3	Shpk	NP_083307.1	ILMN_2596776	002340139	S	2259	CCAGGAGAAGAAAAGTCACCTGGTAAGAACAGCTAAAGGGACCACAGAGC	11	+	73037486-73037535	11qB4	Mus musculus sedoheptulokinase (Shpk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + sedoheptulose = ADP + sedoheptulose 7-phosphate [goid 50277] [evidence IEA]	AW260459; AI194947; 4930431K22Rik	AW260459; AI194947; 4930431K22Rik
Mus musculus	RefSeq	ILMN_192182	ILMN_258353	MYBL1	NM_008651.2	NM_008651.2		17864	118150642	NM_008651.2	Mybl1	NP_032677.2	ILMN_2627105	002260632	S	2312	CATATACACTTAATAAAAAGAGACCAAACCCTAACCCTTGTAAAGCTGTC	1	-	9661680-9661729	1qA2	Mus musculus myeloblastosis oncogene-like 1 (Mybl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	A-myb; MGC123416	A-myb; MGC123416
Mus musculus	Riken	ILMN_205001	ILMN_205001	9530031D18RIK	ri|9530031D18|PX00112H11|AK035399|1756					AK035399	9530031D18Rik		ILMN_1237218	002680747	S	1375	AGGTGTGGTAGTGCTTACACTCTGGGAGGCAGCCGGAGGCAGATCTCTGA										
Mus musculus	RefSeq	ILMN_201428	ILMN_242807	EG666009	XM_980899.2	XM_980899.2		666009	149234204	XM_980899.2	EG666009	XP_985993.2	ILMN_2542258	004540367	S	889	TCTGTGGCCGTGACGCTTATGCAACAGCTCAAGGCCATGCTGGACCCCAA	1	+	95882304-95882353	1qD	PREDICTED: Mus musculus predicted gene, EG666009 (EG666009), mRNA.					
Mus musculus	RefSeq	ILMN_222585	ILMN_222585	NDRG4	NM_145602.2	NM_145602.2		234593	118130183	NM_145602.2	Ndrg4	NP_663577.1	ILMN_2751854	003140681	S	2614	GAGCCTAATTTTGTGTATTCTGTTTGGTGGCTGATAAAGAGACTTTGAGA	8	+	98238732-98238781	8qD1	Mus musculus N-myc downstream regulated gene 4 (Ndrg4), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		MGC7067; Ndr1-rs; Ndr4; SMAP-8; D8Bwg1337e; R74996	MGC7067; Ndr1-rs; Ndr4; SMAP-8; D8Bwg1337e; R74996
Mus musculus	RefSeq	ILMN_197585	ILMN_234535	OXGR1	NM_001001490.2	NM_001001490.2		239283	84662762	NM_001001490.2	Oxgr1	NP_001001490.1	ILMN_1245542	002060079	S	1179	CGACAATTATCAGTACCCTGACTCACGGGCCTCGGACCCACAGCTGCTTT	14	-	120421310-120421359	14qE4	Mus musculus oxoglutarate (alpha-ketoglutarate) receptor 1 (Oxgr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence ISO]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with a purine nucleoside, a compound consisting of a purine base linked either to ribose or deoxyribose [goid 1883] [evidence ISO]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence ISO]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence ISO]	Gm299; Gpr99; P2Y15; Gpr80	Gm299; Gpr99; P2Y15; Gpr80
Mus musculus	RefSeq	ILMN_234535	ILMN_234535	OXGR1	NM_001001490.2	NM_001001490.2		239283	84662762	NM_001001490.2	Oxgr1	NP_001001490.1	ILMN_2938307	001990435	S	3283	TAGAAACCCTGACTCCAAAACTGACGAACCACAGCAAGGTGGCCCTCTGG	14	-	120419206-120419255	14qE4	Mus musculus oxoglutarate (alpha-ketoglutarate) receptor 1 (Oxgr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence ISO]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with a purine nucleoside, a compound consisting of a purine base linked either to ribose or deoxyribose [goid 1883] [evidence ISO]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence ISO]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence ISO]	Gm299; Gpr99; P2Y15; Gpr80	Gm299; Gpr99; P2Y15; Gpr80
Mus musculus	RefSeq	ILMN_225250	ILMN_225250	RAB22A	NM_024436.1	NM_024436.1		19334	21426816	NM_024436.1	Rab22a	NP_077756.1	ILMN_2963223	001780553	S	4071	GGGACCCCTAAGCTAACCTGTAATCCTGCTTCAGAGCATGGCTGCCGACC	2	+	173347299-173347348	2qH4	Mus musculus RAB22A, member RAS oncogene family (Rab22a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Rab22; AW319644; 3732413A17Rik; E130120E14Rik; AW550514; AI662177	Rab22; AW319644; 3732413A17Rik; E130120E14Rik; AW550514; AI662177
Mus musculus	RefSeq	ILMN_185220	ILMN_225250	RAB22A	NM_024436.1	NM_024436.1		19334	21426816	NM_024436.1	Rab22a	NP_077756.1	ILMN_2768841	002340280	S	4116	CGACCAGGCTGGCTTTTATCTTTAAACTTAGCAGGCTGTCATGTCATCCT	2	+	173347344-173347393	2qH4	Mus musculus RAB22A, member RAS oncogene family (Rab22a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Rab22; AW319644; 3732413A17Rik; E130120E14Rik; AW550514; AI662177	Rab22; AW319644; 3732413A17Rik; E130120E14Rik; AW550514; AI662177
Mus musculus	MEEBO	ILMN_188038	ILMN_188038	TTC5	scl0219022.1_38	NM_177625.2			31341360	NM_177625.2	Ttc5		ILMN_1241957	007160546	S	1	TGACAGGGTTTTTGTCAAATCTGTTCATCTTTGTTTTTGGGCGTCCATGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198907	ILMN_232101	LOC546088	XR_003786.1	XR_003786.1		546088	94385354	XR_003786.1	LOC546088		ILMN_2533350	003390349	S	1006	GAGGCAGAAGGATTCGGAGAAGAAGCAGAAACACGTTCTCGACCGACAGG				8qD1	PREDICTED: Mus musculus similar to G patch domain and KOW motifs (LOC546088), mRNA.					
Mus musculus	Riken	ILMN_202284	ILMN_202284	SYNJ2	ri|4632417B14|PX00012F24|AK014584|2537					AK014584	Synj2		ILMN_1227377	007550039	S	2187	GACCAGCCTTCCCAGGGATTTGGCTGCACAGCAAAGTTCATCTGGTCTCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence TAS]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199672	ILMN_199672	LOC382862	XM_356714.1	XM_356714.1			38075943	XM_356714.1	LOC382862		ILMN_1231677	002810377	S	68	TTCCGACCACTACTGCCGAGAAGGTAGCAGTACCCATAGGTGCCTCTGTG										
Mus musculus	MEEBO	ILMN_191661	ILMN_191661	PPP2R5E	scl42335.15_289				33859659	NM_012024	Ppp2r5e		ILMN_1217444	001690369	S	1	CCAGACTTCTTCCGTTTCAAACAGCAGGATGCAGGTGGCAGCTTACACAC						A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210446	ILMN_210446	LAMP2	scl016784.1_5	NM_010685.2			31543107	NM_010685.2	Lamp2		ILMN_2605666	002060326	S	3482	AGCTGATGTACGTACGATATCTCTTCTCAGATATTTGCCTGTCTGTTTGC						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding the platelet dense granule [goid 31088] [evidence ISO]				
Mus musculus	RefSeq	ILMN_217062	ILMN_217062	CSE1L	NM_023565.2	NM_023565.2		110750	142356854	NM_023565.2	Cse1l	NP_076054.1	ILMN_1258174	001340288	S	2835	GATCCTGTAGGTCAGATGGTAAACAACCCCAAAATCCATCTGGCACAGTC	2	+	166770025-166770074	2qH3	Mus musculus chromosome segregation 1-like (S. cerevisiae) (Cse1l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with importin-alpha to mediate its transfer through the nuclear pore to the cytoplasm [goid 8262] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AA407533; Cas; Xpo2; 2610100P18Rik; Capts	AA407533; Cas; Xpo2; 2610100P18Rik; Capts
Mus musculus	Riken	ILMN_207159	ILMN_207159	F730038L14RIK	ri|F730038L14|PL00003N11|AK089485|1955					AK089485	F730038L14Rik		ILMN_1221450	002650441	S	1661	ATCCCAGAGCCTGAGGAAAACCTGAGGTGGTTTTGAGCTGCCCAGGATCG										
Mus musculus	RefSeq	ILMN_189571	ILMN_212498	9830001H06RIK	XM_283804.7	XM_283804.7		320706	149250084	XM_283804.7	9830001H06Rik	XP_283804.7	ILMN_2462456	002900044	S	13001	AGGGCATCCTTGGGCCAACTGTCCACCTATCCCTTCCACTGTTCTGTCCT	2	-	156836378-156836427	2qH1	PREDICTED: Mus musculus RIKEN cDNA 9830001H06 gene (9830001H06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212498	ILMN_212498	9830001H06RIK	XM_283804.7	XM_283804.7		320706	149250084	XM_283804.7	9830001H06Rik	XP_283804.7	ILMN_2627140	007160296	S	7547	GGGCCGTTCAGCCTTACCATCGTCTCTGTATGGGTTGTGCATTTCCACTG	2	-	156841832-156841881	2qH1	PREDICTED: Mus musculus RIKEN cDNA 9830001H06 gene (9830001H06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221567	ILMN_221567	LARS2	NM_153168.2	NM_153168.2		102436	118130101	NM_153168.2	Lars2	NP_694808.1	ILMN_2737296	006060730	S	3508	CAATGCTCACTTAGGCCTACAAGCAAGGGAGAGGCTTAAGCACAAGGTCT	9	+	123371409-123371458	9qF4	Mus musculus leucyl-tRNA synthetase, mitochondrial (Lars2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6429] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-leucine + tRNA(Leu) = AMP + diphosphate + L-leucyl-tRNA(Leu) [goid 4823] [evidence IEA]	LEURS; AI035546; Kiaa0028	LEURS; AI035546; Kiaa0028
Mus musculus	MEEBO	ILMN_185839	ILMN_185839	PVT1	scl0019296.1_9				51829724	XM_488744	Pvt1		ILMN_1250826	003420170	S	20	TCAATACCTCTTCTCCAATATAGTCTCATGGAAATGGTGGACTAGAGCTG										
Mus musculus	RefSeq	ILMN_200374	ILMN_200374	LOC386361	XM_359185.1	XM_359185.1			38081462	XM_359185.1	LOC386361		ILMN_1243167	004590020	S	311	GCATTTGGTGGCTGATTACGGAAAGGACCCCCCGGGAAGTGAAAGATCTG										
Mus musculus	RefSeq	ILMN_189678	ILMN_230717	AGL	XM_901354.2	XM_901354.2		77559	94369825	XM_901354.2	Agl	XP_906447.1	ILMN_2463424	000840463	S	4027	ATCCCAGCCACTCCAAGGTAGAGTCTGTGTATGGATGCGTCTGCCGAGGC	3	-	116746843-116746872:116746873-116746892	3qG1	PREDICTED: Mus musculus amylo-1,6-glucosidase, 4-alpha-glucanotransferase, transcript variant 7 (Agl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Intracellular foci at which aggregated proteins have been sequestered [goid 16234] [evidence IDA]	The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IDA]	Catalysis of the cleavage of branch points in branched glycogen polymers [goid 4133] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any polysaccharide [goid 30247] [evidence IDA]; Interacting selectively with any polysaccharide [goid 30247] [evidence IMP]; Interacting selectively and non-covalently with a polymer of ubiqutin [goid 31593] [evidence IDA]; Interacting selectively and non-covalently with a polymer of ubiqutin [goid 31593] [evidence IMP]		
Mus musculus	Riken	ILMN_203874	ILMN_203874	A630025D22RIK	ri|A630025D22|PX00145O13|AK041622|2457					AK041622	A630025D22Rik		ILMN_1254619	000060044	S	2110	GCAAATTTTAGAACTTACAGTAGTGCTCAGCTTGCTGCCTCAAAGCAGGC										
Mus musculus	RefSeq	ILMN_254908	ILMN_254908	FEZF2	NM_080433.1	NM_080433.1		54713	17978245	NM_080433.1	Fezf2	NP_536681.1	ILMN_2932692	000770615	S	1887	GCGCTGAAACATATTTAATTCCAGGCCTCCGCTTCTCCTCAGGCAGCCGG	14	-	11135489-11135538	14qA1	Mus musculus Fez family zinc finger 2 (Fezf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI852056; AI451466; Fezl; Zfp312; Fez	AI852056; AI451466; Fezl; Zfp312; Fez
Mus musculus	Riken	ILMN_202936	ILMN_202936	A030009K22RIK	ri|A030009K22|PX00063J07|AK037204|1668					AK037204	A030009K22Rik		ILMN_1247184	001510279	S	653	CCCCAGGAATCTCTCCATATGCTGGGAGGTCTCCTCACACAGCGACCTCT										
Mus musculus	RefSeq	ILMN_197645	ILMN_251983	BRD1	NM_001033274.2	NM_001033274.2		223770	141801806	NM_001033274.2	Brd1	NP_001028446.1	ILMN_1251262	002230762	S	1751	ACTGGTTGCTCAAAAGGCTGTCTAGGAATGGTGCTCCCCTGTTGCGGCGG	15	-	88547375-88547424	15qE3	Mus musculus bromodomain containing 1 (Brd1), mRNA. XM_922207	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA4191; mKIAA4191; 1110059H06Rik; AI316859	KIAA4191; mKIAA4191; 1110059H06Rik; AI316859
Mus musculus	RefSeq	ILMN_201666	ILMN_254071	LSM6	NM_030145.2	NM_030145.2		78651	141802913	NM_030145.2	Lsm6	NP_084421.1	ILMN_1221336	000990195	S	396	TGGTTCTCTTACCATCTTAGTTGGCCTGTTTTCATGGTGGCTGGTGGGGG	8	-	81332011-81332060	8qC1	Mus musculus LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm6), mRNA. XM_990335	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]	2410088K19Rik; MGC117708; AI747288; 1500031N17Rik	2410088K19Rik; MGC117708; AI747288; 1500031N17Rik
Mus musculus	RefSeq	ILMN_188894	ILMN_254071	LSM6	NM_030145.2	NM_030145.2		78651	141802913	NM_030145.2	Lsm6	NP_084421.1	ILMN_1251056	001570070	S	1758	CCAGCCTGCAGGTCTTTATTTCCCTCTTGCCATTTCTAGCTTAATAGCGC	8	-	81330649-81330698	8qC1	Mus musculus LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm6), mRNA. XM_990335	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]	2410088K19Rik; MGC117708; AI747288; 1500031N17Rik	2410088K19Rik; MGC117708; AI747288; 1500031N17Rik
Mus musculus	RefSeq	ILMN_249994	ILMN_249994	CYB5D1	NM_001045525.1	NM_001045525.1		327951	113865880	NM_001045525.1	Cyb5d1	NP_001038990.1	ILMN_2945777	000670632	S	720	GATGACCTCACAGAGCTCTAGGAAAGGAGATGTGCGTGTAGACCCAAAAA				11qB3	Mus musculus cytochrome b5 domain containing 1 (Cyb5d1), mRNA.			Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	Gm740; MGC118302	Gm740; MGC118302
Mus musculus	MEEBO	ILMN_219338	ILMN_219338	ILF3	scl0003557.1_0	NM_010561.1			6754339	NM_010561.1	Ilf3		ILMN_2707400	000510612	S	803	GCTATCAGTCAACGATCCCCCGGACGTTCTGGACAGGCAGAAATGCCTTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]		
Mus musculus	MEEBO	ILMN_219338	ILMN_219338	ILF3	scl0003557.1_0	NM_010561.1			6754339	NM_010561.1	Ilf3		ILMN_1255013	000460301	S	3100	CGTGCCGTGACCCCTATTTAGCTGTGTTTTGGACTCCGTGTCTTCAGTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]		
Mus musculus	MEEBO	ILMN_219338	ILMN_219338	ILF3	scl0003557.1_0	NM_010561.1			6754339	NM_010561.1	Ilf3		ILMN_2707399	005290209	S	802	CGCTATCAGTCAACGATCCCCCGGACGTTCTGGACAGGCAGAAATGCCTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]		
Mus musculus	RefSeq	ILMN_234085	ILMN_234085	MDK	NM_001012335.1	NM_001012335.1		17242	59894789	NM_001012335.1	Mdk	NP_001012335.1	ILMN_3080012	005340072	I	15	ACGCAGTGGCTGTGGCCCCAGTCCCTTCAGGCGGCTGCTCTGCCACCAAG	2	-	91771792-91771841	2qE1	Mus musculus midkine (Mdk), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	MK; Mek	MK; Mek
Mus musculus	RefSeq	ILMN_221727	ILMN_245358	AA987161	XM_906771.3	XM_906771.3		380856	149264474	XM_906771.3	AA987161	XP_911864.2	ILMN_2739556	004210768	S	969	TTTCTGCTGAATGGAAACTATGTAAGATTGAGAAATGTGGTAAATAAAGC					PREDICTED: Mus musculus expressed sequence AA987161, transcript variant 15 (AA987161), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_238221	ILMN_238221	SUFU	NM_015752.2	NM_015752.2		24069	70794804	NM_015752.2	Sufu	NP_056567.2	ILMN_3127458	005720154	A	2285	CCATGCAGCCCTGGGTAGAGATTGGCTGTGGCCTGGAAGGTGTGCTATTG	19	+	46561076-46561125	19qC3	Mus musculus suppressor of fused homolog (Drosophila) (Sufu), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IMP]; The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 42994] [evidence IGI]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810026F04Rik; Su(fu)	2810026F04Rik; Su(fu)
Mus musculus	RefSeq	ILMN_215687	ILMN_314460	LOC621824	XR_031998.1	XR_031998.1		621824	149264509	XR_031998.1	LOC621824		ILMN_2736999	000150435	S	913	CCCCCCACCCAACCCTCATCACACACTGGATGCCATATGGATCTCTCTAC				13qC1	PREDICTED: Mus musculus similar to integrin-linked kinase ILK (LOC621824), misc RNA.					
Mus musculus	RefSeq	ILMN_198853	ILMN_198853	LOC330693	XM_194395.3	XM_194395.3			38089092	XM_194395.3	LOC330693		ILMN_1246296	002370243	S	1058	GTCACATGTCAGTAGAGGTTCTACGGGAAGAAGCATGTGACCTGTTCGAG										
Mus musculus	RefSeq	ILMN_223323	ILMN_223323	ELOVL4	NM_148941.1	NM_148941.1		83603	22507346	NM_148941.1	Elovl4	NP_683743.1	ILMN_1250507	001740424	S	2633	TTCCATTCCCCCTCAAAGGCATGCAGTCACCAACATTACGGGAACAGCAG	9	-	83672465-83672514	9qE2	Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 (Elovl4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]			
Mus musculus	RefSeq	ILMN_213220	ILMN_213220	GPATCH4	NM_025663.2	NM_025663.2		66614	27754123	NM_025663.2	Gpatch4	NP_079939.2	ILMN_1219670	005390056	S	1395	CAGCTCACCAGCTAAAGGATGGTGGGAAGAGGAATCAGGATGGAGGAATA	3	+	87859819-87859868	3qF1	Mus musculus G patch domain containing 4 (Gpatch4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Gpatc4; 2610029K21Rik	Gpatc4; 2610029K21Rik
Mus musculus	MEEBO	ILMN_193304	ILMN_193304	PLOD2	scl35506.1_730				6755107	NM_011961	Plod2		ILMN_2495956	004640050	S	18	GTTGTGCTCTGGGGATATGCTTCATGGTGGGTGGACAGGGAGAGGAACAC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2 [goid 8475] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193304	ILMN_193304	PLOD2	scl35506.1_730				6755107	NM_011961	Plod2		ILMN_2770429	003120450	S	2899	CTGCTTTACAAAGTGCTTCAAGCGTCAGCTCCAAGTGTCCTTATGTCAGC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2 [goid 8475] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192277	ILMN_192277	V1RC20	NM_134175.1	NM_134175.1		171193	21717678	NM_134175.1	V1rc20	NP_598936.1	ILMN_2486589	006020468	S	742	TCAACCACCTCATTCCTCTTATGGAGATATGATCCAGTCATCCTGACTCT	6	+	56953090-56953139	6qB3	Mus musculus vomeronasal 1 receptor, C20 (V1rc20), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_200358	ILMN_200358	LOC386294	XM_359162.1	XM_359162.1			38081410	XM_359162.1	LOC386294		ILMN_1241329	004050270	S	1176	CCTATCGAATTACCTGAAGGGGAACTGGTCGCAGGAGCTGGGAAGGTTGC										
Mus musculus	RefSeq	ILMN_216755	ILMN_216755	PCCA	NM_144844.1	NM_144844.1		110821	21450240	NM_144844.1	Pcca	NP_659093.1	ILMN_2674924	002000192	S	1716	GTTACATGATGAAGATCATACTGTCGTGGCATCTAACAATGGGCCGGCAT	14	+	123137185-123137226:123189578-123189585	14qE5	Mus musculus propionyl-Coenzyme A carboxylase, alpha polypeptide (Pcca), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + propanoyl-CoA + HCO3- = ADP + phosphate + (S)-methylmalonyl-CoA [goid 4658] [evidence IMP]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [evidence IEA]	C79630	C79630
Mus musculus	RefSeq	ILMN_216755	ILMN_216755	PCCA	NM_144844.1	NM_144844.1		110821	21450240	NM_144844.1	Pcca	NP_659093.1	ILMN_2921698	002690181	S	2285	TGCGCAAGCATTTACAGGAGCACTCCTGTGCAGGAGGTTCTACAGCCTCC	14	+	123288864-123288913	14qE5	Mus musculus propionyl-Coenzyme A carboxylase, alpha polypeptide (Pcca), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + propanoyl-CoA + HCO3- = ADP + phosphate + (S)-methylmalonyl-CoA [goid 4658] [evidence IMP]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [evidence IEA]	C79630	C79630
Mus musculus	RefSeq	ILMN_209094	ILMN_209094	NFKB1	NM_008689.2	NM_008689.2		18033	117606363	NM_008689.2	Nfkb1	NP_032715.2	ILMN_2592476	004180669	S	3521	GCCGGCCTGCAGGGTCACTCGATTTCATTCAAGGCCTTCCGAATTTGGCG	3	-	135248166-135248215	3qG3	Mus musculus nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105 (Nfkb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45083] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]	p50/p105; p50; NF-kappaB; p105; NF-kappaB1; NF-KB1	p50/p105; p50; NF-kappaB; p105; NF-kappaB1; NF-KB1
Mus musculus	RefSeq	ILMN_198494	ILMN_311313	LOC100042921	XM_001479408.1	XM_001479408.1		100042921	149256323	XM_001479408.1	LOC100042921	XP_001479458.1	ILMN_1237608	002650037	S	1468	CCACACGGTCGACACTTTCACTTATACGAAGACATGATTGAGTTGGCCAC	7	-	10683489-10683538	7qA1	PREDICTED: Mus musculus similar to vomeronasal 2, receptor, 15, transcript variant 1 (LOC100042921), mRNA.					
Mus musculus	RefSeq	ILMN_188944	ILMN_188944	V1RC27	NM_134182.1	NM_134182.1		171200	21717684	NM_134182.1	V1rc27	NP_598943.1	ILMN_1227837	000620674	S	837	GCAGATCAGTTCTGATAAGAGAATAATTCATATACTTATCCATATACTAA	6	+	57355294-57355343	6qB3	Mus musculus vomeronasal 1 receptor, C27 (V1rc27), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_211374	ILMN_211374	L2HGDH	NM_145443.1	NM_145443.1		217666	21703883	NM_145443.1	L2hgdh	NP_663418.1	ILMN_2999167	000380541	S	2823	AACCAAGCCCTCGTGGTCCTCCATAGCAGCTGATTCCAGAAGAAGCACTG	12	-	70791832-70791881	12qC2	Mus musculus L-2-hydroxyglutarate dehydrogenase (L2hgdh), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (S)-2-hydroxyglutarate + acceptor = 2-oxoglutarate + reduced acceptor [goid 47545] [evidence ISA]	MGC28775; BC016226	MGC28775; BC016226
Mus musculus	RefSeq	ILMN_211374	ILMN_211374	L2HGDH	NM_145443.1	NM_145443.1		217666	21703883	NM_145443.1	L2hgdh	NP_663418.1	ILMN_2615187	001710634	S	3161	ATTTGATATTTATGTCAATAGGAATTTTTTGTTAAATACTGATATATAAG	12	-	70791494-70791543	12qC2	Mus musculus L-2-hydroxyglutarate dehydrogenase (L2hgdh), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (S)-2-hydroxyglutarate + acceptor = 2-oxoglutarate + reduced acceptor [goid 47545] [evidence ISA]	MGC28775; BC016226	MGC28775; BC016226
Mus musculus	MEEBO	ILMN_187288	ILMN_187288	6720458D17RIK	scl7286.1.1_309						6720458D17Rik		ILMN_1242427	004920491	S	1	CTGCAGTCACTTCTGAATCACTTGCACTGTTTGGGAAATGCCAGGTTTAC										
Mus musculus	RefSeq	ILMN_223721	ILMN_223721	GNG7	NM_010319.3	NM_010319.3		14708	84579918	NM_010319.3	Gng7	NP_034449.2	ILMN_3103233	004040605	A	3270	GTGTGCCACGCCCACTCTCCCAGTGTTACTATTGTGTGGAATGAGGTCAC	10	-	80411534-80411583	10qC1	Mus musculus guanine nucleotide binding protein (G protein), gamma 7 (Gng7), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses guanylyl cyclase activity [goid 7168] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IMP]	AI840417	AI840417
Mus musculus	RefSeq	ILMN_223721	ILMN_223721	GNG7	NM_010319.3	NM_010319.3		14708	84579918	NM_010319.3	Gng7	NP_034449.2	ILMN_3030009	000450408	I	13	TCTCTAGGCCCCGCGGTGCGTTCGGCTGTGCGGCTGCTGAGACACTGGCT	10	-	80477608-80477657	10qC1	Mus musculus guanine nucleotide binding protein (G protein), gamma 7 (Gng7), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses guanylyl cyclase activity [goid 7168] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IMP]	AI840417	AI840417
Mus musculus	RefSeq	ILMN_189894	ILMN_223539	SUPT16H	NM_033618.3	NM_033618.3		114741	154350221	NM_033618.3	Supt16h	NP_291096.2	ILMN_2768053	005820398	S	4192	TGTGGGTGTGGCCTTCTTCCCGCTTCTCTTCTTGTCAAGATATTCTAGGC				14qC2	Mus musculus suppressor of Ty 16 homolog (S. cerevisiae) (Supt16h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	Spt16; Cdc68; Fact140	Spt16; Cdc68; Fact140
Mus musculus	MEEBO	ILMN_184296	ILMN_184296	NFATC1	scl51214.9_454				31560458	NM_016791	Nfatc1		ILMN_2647734	006110523	S	11	ACATGACGGGGCTGGAGCAGGACCCGGAGTTCGACTTCGATTTCCTCTTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	MEEBO	ILMN_195849	ILMN_195849	2900072M03RIK	scl072970.1_11						2900072M03Rik		ILMN_1216675	005340689	S	16	CATGTAGTACTCTGTGCTGTGACAATGCCACTCTTCCCCCAAGATCACAC										
Mus musculus	Riken	ILMN_201621	ILMN_201621	1010001I08RIK	ri|1010001I08|R000005N19|AK003123|1291					AK003123	1010001I08Rik		ILMN_1257345	005390523	S	1071	AGCTGGAAAGTAAAGACCCTGTTGAGTGAGGTGGCAGATTGTGGACGCCC										
Mus musculus	RefSeq	ILMN_219071	ILMN_219071	2810403A07RIK	NM_028814.2	NM_028814.2		74200	142366623	NM_028814.2	2810403A07Rik	NP_083090.1	ILMN_1227212	000730300	S	2651	GACTGGAATTGCAACTTGTCCTTTTTTCTTGGCATTGCGGGTTTTGCCAA	3	+	88516531-88516580	3qF1	Mus musculus RIKEN cDNA 2810403A07 gene (2810403A07Rik), mRNA.				AI451678; AI256352; A430106P18Rik	AI451678; AI256352; A430106P18Rik
Mus musculus	Riken	ILMN_202302	ILMN_202302	4933439M10RIK	ri|4933439M10|PX00021J24|AK017126|1965					AK017126	4933439M10Rik		ILMN_1223277	005390719	S	1828	AGACATTCAAGGTGGTGTATGCCTTTAACCCCCGCACTGGAGAGACAGAG										
Mus musculus	MEEBO	ILMN_193503	ILMN_193503	ZF	scl0233490.1_48	NM_145151.1			21617854	NM_145151.1	Zf		ILMN_1237142	000020398	S	6	GCTAAAAGCATGAATGTGACACTGTAACCAACTCCTAATGATAACCTGTG										
Mus musculus	RefSeq	ILMN_209256	ILMN_209256	2210417D09RIK	NM_025620.2	NM_025620.2		66532	70909367	NM_025620.2	2210417D09Rik	NP_079896.1	ILMN_2594066	004570360	S	780	GGGCTGAGTGACATGGGCAGAGTTTACATCCGCATCCTCTAAACTGGGCA	6	+	146981838-146981879:146981880-146981887	6qG3	Mus musculus RIKEN cDNA 2210417D09 gene (2210417D09Rik), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]				
Mus musculus	Riken	ILMN_204537	ILMN_204537	B230378H13RIK	ri|B230378H13|PX00161J04|AK046384|1662					AK046384	B230378H13Rik		ILMN_1237858	006330176	S	1236	GCCAGACCACTGAGCAAGTGAAATTTCTCTGTTTTCTGTTGAGCGGCTGC										
Mus musculus	MEEBO	ILMN_193765	ILMN_193765	1700128E19RIK	scl34077.3_46						1700128E19Rik		ILMN_2500207	004260768	S	8	GCCGCTGAGGACATGCCGTCTACCAGCAAAGTTCCTTGTAAATCTTGAGC										
Mus musculus	Riken	ILMN_201870	ILMN_201870	GOLPH3	ri|4733401N08|PX00013B21|AK014644|910					AK014644	Golph3		ILMN_1259975	002630095	S	836	GCCCTGACTGAACTCCAACTCAGATCTACCTGCCTTTTCCGCCTAAGTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]				
Mus musculus	RefSeq	ILMN_247078	ILMN_247078	MYOM2	NM_008664.1	NM_008664.1		17930	6678995	NM_008664.1	Myom2	NP_032690.1	ILMN_2992449	004050156	S	4977	CATCCTGCCTACCTACATATCCCTATCTTGGCTTAACCTGTTTCTCTGGC	8	+	15133443-15133492	8qA1.1	Mus musculus myomesin 2 (Myom2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence TAS]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IPI]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]	MGC141540; MGC141541; AW146149	MGC141540; MGC141541; AW146149
Mus musculus	RefSeq	ILMN_192592	ILMN_242045	UGT1A6B	NM_201410.1	NM_201410.1		394435	47059132	NM_201410.1	Ugt1a6b	NP_958812.1	ILMN_2515982	003310138	S	21	CTTCCAGATTTCTTACTCTTGCTCAAGGGCCCTCATCACGTGCTACCTAG	1	+	90031429-90031478	1qD	Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A6B (Ugt1a6b), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC36247; Ugt1a9; A9'	MGC36247; Ugt1a9; A9'
Mus musculus	RefSeq	ILMN_212848	ILMN_212848	KRIT1	NM_030675.2	NM_030675.2		79264	24475699	NM_030675.2	Krit1	NP_109600.1	ILMN_1257268	004890240	S	1144	GAACGACAGTGGGTTGATGACTTTCCTTTACATCGAAATGCCTGTGAAGG	5	+	3813052-3813101	5qA1	Mus musculus KRIT1, ankyrin repeat containing (Krit1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence TAS]	BB155247; AI643869; 2010007K12Rik; Krit1B; AA432855; Krit1A; A630036P20Rik; Ccm1; AI450393; BB235701	BB155247; AI643869; 2010007K12Rik; Krit1B; AA432855; Krit1A; A630036P20Rik; Ccm1; AI450393; BB235701
Mus musculus	RefSeq	ILMN_212848	ILMN_212848	KRIT1	NM_030675.2	NM_030675.2		79264	24475699	NM_030675.2	Krit1	NP_109600.1	ILMN_2715749	004150332	S	2443	GGCCTTGTGGTAAAGCTGCTAATGAAGTTAAATGGACAACTAATGCCCTC	5	+	3840877-3840926	5qA1	Mus musculus KRIT1, ankyrin repeat containing (Krit1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence TAS]	BB155247; AI643869; 2010007K12Rik; Krit1B; AA432855; Krit1A; A630036P20Rik; Ccm1; AI450393; BB235701	BB155247; AI643869; 2010007K12Rik; Krit1B; AA432855; Krit1A; A630036P20Rik; Ccm1; AI450393; BB235701
Mus musculus	RefSeq	ILMN_212848	ILMN_212848	KRIT1	NM_030675.2	NM_030675.2		79264	24475699	NM_030675.2	Krit1	NP_109600.1	ILMN_2701155	000430292	S	2596	GCATGTAGTTTCATATAGTATGTATATGCTGTTACATATATTGTACAGAA	5	+	3841030-3841079	5qA1	Mus musculus KRIT1, ankyrin repeat containing (Krit1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence TAS]	BB155247; AI643869; 2010007K12Rik; Krit1B; AA432855; Krit1A; A630036P20Rik; Ccm1; AI450393; BB235701	BB155247; AI643869; 2010007K12Rik; Krit1B; AA432855; Krit1A; A630036P20Rik; Ccm1; AI450393; BB235701
Mus musculus	RefSeq	ILMN_221852	ILMN_221852	COASY	NM_027896.4	NM_027896.4		71743	146141093	NM_027896.4	Coasy	NP_082172.2	ILMN_2741236	000020491	S	1962	AGAGCAACGTGGTTCTGAGCACCTTGTGGGAGTCACATGTCACACAGAGC				11qD	Mus musculus Coenzyme A synthase (Coasy), nuclear gene encoding mitochondrial protein, mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15937] [evidence IDA]; The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15937] [evidence ISA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + dephospho-CoA = ADP + CoA [goid 4140] [evidence IDA]; Catalysis of the reaction: ATP + dephospho-CoA = ADP + CoA [goid 4140] [evidence ISA]; Catalysis of the reaction: ATP + pantetheine 4'-phosphate = diphosphate + dephospho-CoA [goid 4595] [evidence IDA]; Catalysis of the reaction: ATP + pantetheine 4'-phosphate = diphosphate + dephospho-CoA [goid 4595] [evidence IMP]; Catalysis of the reaction: ATP + pantetheine 4'-phosphate = diphosphate + dephospho-CoA [goid 4595] [evidence ISA]	1300003G02Rik; Ppat; Dpck; Ukr1	1300003G02Rik; Ppat; Dpck; Ukr1
Mus musculus	RefSeq	ILMN_208998	ILMN_208998	CR2	NM_007758.2	NM_007758.2		12902	114326525	NM_007758.2	Cr2	NP_031784.1	ILMN_2696049	004760450	S	3141	AGGAGCTCTTCATTTAGAAACACGAGAAGTATATTCTATTGATCCATATA	1	-	196967397-196967446	1qH6	Mus musculus complement receptor 2 (Cr2), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Combining with any component or product of the complement cascade to initiate a change in cell activity [goid 4875] [evidence IMP]	Cr1; CD21; Cr-2; MGC130295; CD35; Cr-1; C3DR	Cr1; CD21; Cr-2; MGC130295; CD35; Cr-1; C3DR
Mus musculus	RefSeq	ILMN_208998	ILMN_208998	CR2	NM_007758.2	NM_007758.2		12902	114326525	NM_007758.2	Cr2	NP_031784.1	ILMN_2833652	003190288	S	5926	GGGTCCAGGAAGTAGAATGTGGTAGTTTGAACAAAATGGCCCCTATAGGC	1	-	196963236-196963285	1qH6	Mus musculus complement receptor 2 (Cr2), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Combining with any component or product of the complement cascade to initiate a change in cell activity [goid 4875] [evidence IMP]	Cr1; CD21; Cr-2; MGC130295; CD35; Cr-1; C3DR	Cr1; CD21; Cr-2; MGC130295; CD35; Cr-1; C3DR
Mus musculus	MEEBO	ILMN_215068	ILMN_215068	5830472H07RIK	scl076088.12_72	NM_175233.2			31340674	NM_175233.2	5830472H07Rik		ILMN_2755293	002970603	S	3409	GAACGCCATGGGCCAGCAGAATGGCTCTGAGAATAGAGTACTTGTTACCA										
Mus musculus	Riken	ILMN_202703	ILMN_202703	4930405K06RIK	ri|4930405K06|PX00029M19|AK019566|917					AK019566	4930405K06Rik		ILMN_1237930	000730068	S	56	ATGGTTTCCGCACACCTCTGGAACTGGCGCGAGGAGTGAGGGGCAACACC										
Mus musculus	RefSeq	ILMN_218807	ILMN_218807	ODF2L	NM_025714.2	NM_025714.2		52184	142388563	NM_025714.2	Odf2l	NP_079990.1	ILMN_2754626	001240088	S	2003	GTAGCTCTTACTATTCTTTTGTGGTAGATAATTTGCATTGAAGTCTAGTT	3	+	144816591-144816640	3qH2	Mus musculus outer dense fiber of sperm tails 2-like (Odf2l), mRNA.				D3Ertd250e; 9630045K08Rik; 4733401D09Rik	D3Ertd250e; 9630045K08Rik; 4733401D09Rik
Mus musculus	RefSeq	ILMN_218807	ILMN_218807	ODF2L	NM_025714.2	NM_025714.2		52184	142388563	NM_025714.2	Odf2l	NP_079990.1	ILMN_2700460	001780189	S	944	GTTTCAGCTTCCAGTGACTGGAAAAGTCAGTTCGAGAAAATTGCCATAGA	3	+	144798610-144798659	3qH2	Mus musculus outer dense fiber of sperm tails 2-like (Odf2l), mRNA.				D3Ertd250e; 9630045K08Rik; 4733401D09Rik	D3Ertd250e; 9630045K08Rik; 4733401D09Rik
Mus musculus	Riken	ILMN_205324	ILMN_205324	A230005G17RIK	ri|A230005G17|PX00126H07|AK038411|1994					AK038411	A230005G17Rik		ILMN_1242093	000150500	S	1703	CTGCTTGGCACAGTCTTCCCCACTTTTTGGCCTGGACGACACTCTGTTGG										
Mus musculus	RefSeq	ILMN_191414	ILMN_238497	PTPRZ1	XM_988289.1	XM_988289.1		19283	94378408	XM_988289.1	Ptprz1	XP_993383.1	ILMN_1257625	003190368	S	6186	TGTGTGAGTGGGACTAATGAGTCCACGGGTCACTGTAGTCAGGAGTGTTG				6qA3.1	PREDICTED: Mus musculus protein tyrosine phosphatase, receptor type Z, polypeptide 1, transcript variant 3 (Ptprz1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_205959	ILMN_205959	C230043G09RIK	ri|C230043G09|PX00174N19|AK048752|3011					AK048752	C230043G09Rik		ILMN_1228441	004760379	S	2872	CCTGCGCAGTCTGTCAGAGTTCCACACACATGACCGTGACTCCTGAGAAC										
Mus musculus	RefSeq	ILMN_198762	ILMN_312377	LOC100044736	XM_001472946.1	XM_001472946.1		100044736	149272183	XM_001472946.1	LOC100044736	XP_001472996.1	ILMN_1228827	005340017	S	920	CCCGCGGCCACTAGCTGGGGAAACTAACAGCAAGTCACAGCATCAGAGTG					PREDICTED: Mus musculus similar to Armadillo repeat containing, X-linked 6 (LOC100044736), mRNA.					
Mus musculus	RefSeq	ILMN_215668	ILMN_215668	NEK5	NM_177898.4	NM_177898.4		330721	141803451	NM_177898.4	Nek5	NP_808566.2	ILMN_1222147	007550348	S	2153	GCCAGTCATGACGTGCAAGTGTGAACAATCTTCTGTTCCCCATGCGTGGG	8	-	23184289-23184338	8qA2	Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 5 (Nek5), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	6530411J22; BB049667	6530411J22; BB049667
Mus musculus	RefSeq	ILMN_248959	ILMN_248959	IQUB	NM_172535.1	NM_172535.1		214704	27369745	NM_172535.1	Iqub	NP_766123.1	ILMN_2833634	000510154	S	3156	GGCCCTAATCTACGACATACGTGACACAGGGAAACAGAAGGAATTCAGGG	6	-	24395304-24395353	6qA3.1	Mus musculus IQ motif and ubiquitin domain containing (Iqub), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		4932408B21Rik	4932408B21Rik
Mus musculus	RefSeq	ILMN_210082	ILMN_210082	OLFR808	NM_146928.1	NM_146928.1		258930	22203804	NM_146928.1	Olfr808	NP_667139.1	ILMN_2602032	003390438	S	866	CCCTAAGGAACCAGCAAGTCAAACAGGCATTCAAGGACTTCACAAGAAAA	10	+	129205419-129205468	10qD3	Mus musculus olfactory receptor 808 (Olfr808), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR112-2	MOR112-2
Mus musculus	Riken	ILMN_202366	ILMN_202366	4921511F01RIK	ri|4930503K02|PX00032P21|AK015690|1696					AK015690	4921511F01Rik		ILMN_1243452	000130091	S	1605	GGAACACCTTGATGGGGGCCAGAGGGAGGCCTAGAGATAATGTAAGGTGC										
Mus musculus	RefSeq	ILMN_208856	ILMN_208856	MRPL55	NM_026035.1	NM_026035.1		67212	21313399	NM_026035.1	Mrpl55	NP_080311.1	ILMN_2590185	004230398	S	480	GAAAACGGGAGGCTCAGCTCCAGCAGAAGAGGGAAGAAGAGCCAGAGGTA	11	+	59021897-59021946	11qB1.3	Mus musculus mitochondrial ribosomal protein L55 (Mrpl55), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810038N09Rik	2810038N09Rik
Mus musculus	RefSeq	ILMN_220129	ILMN_220129	OLFR1012	NM_146568.1	NM_146568.1		258561	22129506	NM_146568.1	Olfr1012	NP_666779.1	ILMN_2965563	007330615	S	563	GTGATGTCAGGGAGAGTTACCAGTCTGTGCTCTACTTCCTCCTAGCTTCC	2	-	85599919-85599968	2qD	Mus musculus olfactory receptor 1012 (Olfr1012), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR213-6	MOR213-6
Mus musculus	RefSeq	ILMN_196451	ILMN_245700	KCTD17	NM_001081367.1	NM_001081367.1		72844	124486940	NM_001081367.1	Kctd17	NP_001074836.2	ILMN_2616989	005960086	S	1452	CAGGTGTAACGGGTTGAGCTGTCCCGCCCGTGTCTTGACCACCCCGGGAT	15	+	78269611-78269660	15qE1	Mus musculus potassium channel tetramerisation domain containing 17 (Kctd17), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	N28155; AA414907; 2900008M13Rik; AW742389	N28155; AA414907; 2900008M13Rik; AW742389
Mus musculus	RefSeq	ILMN_196451	ILMN_245700	KCTD17	NM_001081367.1	NM_001081367.1		72844	124486940	NM_001081367.1	Kctd17	NP_001074836.2	ILMN_1233001	001450037	S	860	CTGGCCCGAGGAGGAAGACAAGCCCTCTACCTTGTCAGTGCTGCCTGCAT	15	+	78269019-78269068	15qE1	Mus musculus potassium channel tetramerisation domain containing 17 (Kctd17), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	N28155; AA414907; 2900008M13Rik; AW742389	N28155; AA414907; 2900008M13Rik; AW742389
Mus musculus	RefSeq	ILMN_216252	ILMN_216252	KEL	NM_032540.2	NM_032540.2		23925	71896654	NM_032540.2	Kel	NP_115929.2	ILMN_2668996	004070500	S	2287	CCAAGCCTTCGAGTCCATGGGCCCCTGAGCAATACTCCAGATTTTGCCAA	6	-	41644015-41644064	6qB2.1	Mus musculus Kell blood group (Kel), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	MGC107471; CD238	MGC107471; CD238
Mus musculus	RefSeq	ILMN_247103	ILMN_247103	SCN10A	NM_009134.1	NM_009134.1		20264	6677874	NM_009134.1	Scn10a	NP_033160.1	ILMN_3006939	000270050	S	6239	TCTTGGAGAAGTTGCATAGGGGTGGCACTGTCGCATAGGGGTGGCACTGC	9	-	119457246-119457295	9qF4	Mus musculus sodium channel, voltage-gated, type X, alpha (Scn10a), mRNA.	A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence IEA]	PN3; Nav1.8; SNS	PN3; Nav1.8; SNS
Mus musculus	RefSeq	ILMN_217334	ILMN_217334	TECTA	NM_009347.1	NM_009347.1		21683	6678276	NM_009347.1	Tecta	NP_033373.1	ILMN_2682029	002450546	S	7011	AAGCTGGCCAGAAAAGTTGGTCTGTCCCGCGCTGTTTCTGGAACACCGTG	9	-	42137982-42138031	9qA5.1	Mus musculus tectorin alpha (Tecta), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]	The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IDA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence TAS]	Tctna	Tctna
Mus musculus	Riken	ILMN_204344	ILMN_204344	A930024N16RIK	ri|A930024N16|PX00066F24|AK044579|1876					AK044579	A930024N16Rik		ILMN_1240659	004200133	S	1511	GTGTAGACTGGCCTCAACCTCACAATCCCCTTCCTTTGTAGGGATGCTAC										
Mus musculus	RefSeq	ILMN_223578	ILMN_223578	RNASEH2C	NM_026616.2	NM_026616.2		68209	71834684	NM_026616.2	Rnaseh2c	NP_080892.1	ILMN_1259794	004560154	S	133	CCCTGCGACGTTCTAGTCAGCCGGCCGGCCCCGGTAGATCGCTTCTTCAC	19	+	5602005-5602054	19qA	Mus musculus ribonuclease H2, subunit C (Rnaseh2c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1500026D16Rik; AYP1	1500026D16Rik; AYP1
Mus musculus	RefSeq	ILMN_254061	ILMN_254061	9030025P20RIK	NM_001034891.2	NM_001034891.2		381062	88703056	NM_001034891.2	9030025P20Rik	NP_001030063.1	ILMN_3138222	006220682	A	1203	GTCTGTCCCATTGCATTTTACCGTCACCCCAGCACACAGCCAACCTCTGG	17	+	15200819-15200868	17qA2	Mus musculus RIKEN cDNA 9030025P20 gene (9030025P20Rik), transcript variant 2, mRNA.				2210404J11Rik; 2410011O22Rik	2210404J11Rik; 2410011O22Rik
Mus musculus	RefSeq	ILMN_254061	ILMN_254061	9030025P20RIK	NM_001034891.2	NM_001034891.2		381062	88703056	NM_001034891.2	9030025P20Rik	NP_001030063.1	ILMN_3060788	002630470	I	70	CAAGCCAAGAACTGCCAGAAAACCCTGCCATTCACTCTTCATCTGCCCAG	17	+	15158793-15158842	17qA2	Mus musculus RIKEN cDNA 9030025P20 gene (9030025P20Rik), transcript variant 2, mRNA.				2210404J11Rik; 2410011O22Rik	2210404J11Rik; 2410011O22Rik
Mus musculus	RefSeq	ILMN_188151	ILMN_188151	ARFGAP2	NM_023854.1	NM_023854.1		77038	12963846	NM_023854.1	Arfgap2	NP_076343.1	ILMN_1241481	005220678	S	2499	AGCTGCAGGCTCCACCCACTGGCAGCTGGGCCACGCACTGTGTCCTCCTT	2	+	91116851-91116900	2qE1	Mus musculus ADP-ribosylation factor GTPase activating protein 2 (Arfgap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	2310032E02Rik	2310032E02Rik
Mus musculus	RefSeq	ILMN_188151	ILMN_188151	ARFGAP2	NM_023854.1	NM_023854.1		77038	12963846	NM_023854.1	Arfgap2	NP_076343.1	ILMN_2450215	003840743	S	1614	GTGGTGACGACAGCAAGAACCCTGAGTCCCAGGCTGGAGATGCCGGTCTT	2	+	91115966-91116015	2qE1	Mus musculus ADP-ribosylation factor GTPase activating protein 2 (Arfgap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	2310032E02Rik	2310032E02Rik
Mus musculus	RefSeq	ILMN_188151	ILMN_188151	ARFGAP2	NM_023854.1	NM_023854.1		77038	12963846	NM_023854.1	Arfgap2	NP_076343.1	ILMN_2853409	006110630	S	2273	TGTGGGTCACAGCGCCCTCTGTCTATGCTTGAGGTCCTCTTTGTGTCCTC	2	+	91116625-91116674	2qE1	Mus musculus ADP-ribosylation factor GTPase activating protein 2 (Arfgap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	2310032E02Rik	2310032E02Rik
Mus musculus	RefSeq	ILMN_188151	ILMN_188151	ARFGAP2	NM_023854.1	NM_023854.1		77038	12963846	NM_023854.1	Arfgap2	NP_076343.1	ILMN_2461696	006550743	S	1585	TACTGATCCAGGCTCCATGGCTCAGGCCTGTGGTGACGACAGCAAGAACC	2	+	91115937-91115942:91115943-91115986	2qE1	Mus musculus ADP-ribosylation factor GTPase activating protein 2 (Arfgap2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]	2310032E02Rik	2310032E02Rik
Mus musculus	RefSeq	ILMN_186879	ILMN_233848	SGIP1	NM_144906.1	NM_144906.1		73094	21536263	NM_144906.1	Sgip1	NP_659155.1	ILMN_2678327	004280343	S	1048	ACCATCCATCAGTGACCTGGACAGCATTTTTGGGCCAGTGTTGTCGCCCA	4	+	102593667-102593716	4qC6	Mus musculus SH3-domain GRB2-like (endophilin) interacting protein 1 (Sgip1), mRNA.				gag; 3110007P09Rik; SGIP1alpha	gag; 3110007P09Rik; SGIP1alpha
Mus musculus	RefSeq	ILMN_186879	ILMN_233848	SGIP1	NM_144906.1	NM_144906.1		73094	21536263	NM_144906.1	Sgip1	NP_659155.1	ILMN_2610891	004880368	S	311	CCACCCTACCATAGCAAAGCAGAGTGTGCGCGGGAAGGAGGGAAGAAAGC	4	+	102536285-102536334	4qC6	Mus musculus SH3-domain GRB2-like (endophilin) interacting protein 1 (Sgip1), mRNA.				gag; 3110007P09Rik; SGIP1alpha	gag; 3110007P09Rik; SGIP1alpha
Mus musculus	RefSeq	ILMN_186879	ILMN_233848	SGIP1	NM_144906.1	NM_144906.1		73094	21536263	NM_144906.1	Sgip1	NP_659155.1	ILMN_2631934	000630463	S	3397	CCAGCCCCTTCTGTGCCGTTTAGCAAATGTGGAGATTGCTAAGTCATCGC	4	+	102643467-102643516	4qC6	Mus musculus SH3-domain GRB2-like (endophilin) interacting protein 1 (Sgip1), mRNA.				gag; 3110007P09Rik; SGIP1alpha	gag; 3110007P09Rik; SGIP1alpha
Mus musculus	RefSeq	ILMN_186879	ILMN_233848	SGIP1	NM_144906.1	NM_144906.1		73094	21536263	NM_144906.1	Sgip1	NP_659155.1	ILMN_2616841	006110070	S	1043	AAACTACCATCCATCAGTGACCTGGACAGCATTTTTGGGCCAGTGTTGTC	4	+	102593662-102593711	4qC6	Mus musculus SH3-domain GRB2-like (endophilin) interacting protein 1 (Sgip1), mRNA.				gag; 3110007P09Rik; SGIP1alpha	gag; 3110007P09Rik; SGIP1alpha
Mus musculus	RefSeq	ILMN_233848	ILMN_233848	SGIP1	NM_144906.1	NM_144906.1		73094	21536263	NM_144906.1	Sgip1	NP_659155.1	ILMN_2778789	003310474	S	3524	ACACAGGGGCCTCTCTCGTCCAGCATCCAGGGGTGGGTACCTTGTTTCTT	4	+	102643594-102643643	4qC6	Mus musculus SH3-domain GRB2-like (endophilin) interacting protein 1 (Sgip1), mRNA.				gag; 3110007P09Rik; SGIP1alpha	gag; 3110007P09Rik; SGIP1alpha
Mus musculus	Riken	ILMN_203553	ILMN_203553	9330171B01RIK	ri|9330171B01|PX00106A02|AK034271|3592					AK034271	9330171B01Rik		ILMN_1234726	006270767	S	3479	GGGTACCACTGAAAGGAGGAAATCTGAATGTGCGTTGACAGGTCAGGAGG										
Mus musculus	Riken	ILMN_206296	ILMN_206296	C130053D24RIK	ri|C130053D24|PX00170G18|AK081622|1830					AK081622	C130053D24Rik		ILMN_2579060	000110278	S	1124	GCAGCTCCAGTCCAGCAGGAAGGTGAGGATCTCCTTCGTGAATCCGTCTT										
Mus musculus	MEEBO	ILMN_184663	ILMN_184663	POLR3F	scl20196.8_157				21553302	NM_027417	Polr3f		ILMN_2764690	005550121	S	1442	CAAGGTCGAGGGAATGTAGAGTAGATGAAGCACAGATGTTTGGGGGCAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184663	ILMN_184663	POLR3F	scl20196.8_157				21553302	NM_027417	Polr3f		ILMN_2764637	001070348	S	1071	AGTCTGGAGCCTTGTACATTCCCTAGTTGTTGTGTTGTATGAGATAACTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184663	ILMN_184663	POLR3F	scl20196.8_157				21553302	NM_027417	Polr3f		ILMN_1253316	007330273	S	1	CCTCTGGCCCAACCATCAACCCAACAGTTAAGGGGGGAAAAGTAGTTTCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185951	ILMN_232540	GLIPR1L1	XM_916000.2	XM_916000.2		69286	94388921	XM_916000.2	Glipr1l1	XP_921093.2	ILMN_2431379	003180762	S	356	ATTATTCGCCAGCAGGAAACTTTATAGGCTTCAGACCTTACACGAGAGGA				10qD2	PREDICTED: Mus musculus GLI pathogenesis-related 1 like 1 (Glipr1l1), mRNA.					
Mus musculus	MEEBO	ILMN_223807	ILMN_223807	4932408B21RIK	scl29236.13.1_50				27369745	NM_172535	4932408B21Rik		ILMN_1248935	006900719	S	3310	GAACAACCAAACTAAGATGACCTCAAGAACTAGATAACAAACCCCCAGTC										
Mus musculus	RefSeq	ILMN_213918	ILMN_213918	LACE1	NM_145743.2	NM_145743.2		215951	144922662	NM_145743.2	Lace1	NP_665686.2	ILMN_1231795	006770240	S	2099	GGGCCTCAAGGTTTCCTCAGCTCTAGAAAGAACACGTGTCTAACCAGCAG	10	-	42032755-42032804	10qB2	Mus musculus lactation elevated 1 (Lace1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CG8520; MGC107616	CG8520; MGC107616
Mus musculus	RefSeq	ILMN_218593	ILMN_218593	OLFR771	NM_146547.1	NM_146547.1		258540	22203778	NM_146547.1	Olfr771	NP_666758.1	ILMN_2901331	005130370	S	791	CGGTGGCCATCAATAAAGGTGTGGCTGTTCTGATGACATCGATTGCTCCC	10	-	128597198-128597247	10qD3	Mus musculus olfactory receptor 771 (Olfr771), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR114-8	MOR114-8
Mus musculus	RefSeq	ILMN_200594	ILMN_241432	TAS2R143	NM_001001452.1	NM_001001452.1		387514	47824877	NM_001001452.1	Tas2r143	NP_001001452.1	ILMN_1245879	003370561	S	598	ATGTTCTCACTGTACCAGCATGTGGAGAAGATGAGGGGCCACAGGCCTGG	6	+	42350834-42350883	6qB2.1	Mus musculus taste receptor, type 2, member 143 (Tas2r143), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence NAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence NAS]	mt2r36; Tas2r43	mt2r36; Tas2r43
Mus musculus	RefSeq	ILMN_241432	ILMN_241432	TAS2R143	NM_001001452.1	NM_001001452.1		387514	47824877	NM_001001452.1	Tas2r143	NP_001001452.1	ILMN_2897041	000070086	S	757	AGGAAAAGCATGCAGAGTTACTATTGGGCCAGAGAGGCTATCATCTACAC	6	+	42350993-42351042	6qB2.1	Mus musculus taste receptor, type 2, member 143 (Tas2r143), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [evidence NAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [evidence NAS]	mt2r36; Tas2r43	mt2r36; Tas2r43
Mus musculus	RefSeq	ILMN_216462	ILMN_216462	CCL22	NM_009137.1	NM_009137.1		20299	6677878	NM_009137.1	Ccl22	NP_033163.1	ILMN_1220122	003290674	S	1906	ACCTGACTTGGGTCCTTGTCCTCTGTGTTGCTGTGAAATAGAACGGGGCC	8	+	97275289-97275338	8qC5	Mus musculus chemokine (C-C motif) ligand 22 (Ccl22), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	MDC; Scya22; DCBCK; ABCD-1	MDC; Scya22; DCBCK; ABCD-1
Mus musculus	RefSeq	ILMN_199664	ILMN_310666	LOC100048594	XM_001480606.1	XM_001480606.1		100048594	149249640	XM_001480606.1	LOC100048594	XP_001480656.1	ILMN_2536045	002810441	S	4	GGGCCAAAGAAGCACAGGAAGAAGACAAATCAGCAAGGAGAGGCTGTGGC					PREDICTED: Mus musculus hypothetical protein LOC100048594 (LOC100048594), mRNA.					
Mus musculus	RefSeq	ILMN_215091	ILMN_215091	BC048671	NM_177738.2	NM_177738.2		243535	141802476	NM_177738.2	BC048671	NP_808406.1	ILMN_2655410	004860528	S	846	CCCCACTGTGTAACCTCTGGGAACTTAAATTACTGCAGCTCCGTTTCCCC	6	+	90255128-90255177	6qD1	Mus musculus cDNA sequence BC048671 (BC048671), mRNA.				MGC58841	MGC58841
Mus musculus	RefSeq	ILMN_218045	ILMN_218045	RNPS1	NM_009070.2	NM_009070.2		19826	121674792	NM_009070.2	Rnps1	NP_033096.2	ILMN_1214277	005550170	S	286	GGGGAGAATGGATTTATCAGGAGTGAAAAAGAAGAGCTTGCTAGGAGTCA	17	+	24555086-24555092:24555093-24555135	17qA3.3	Mus musculus ribonucleic acid binding protein S1 (Rnps1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214153	ILMN_214153	0610013E23RIK	NM_029788.2	NM_029788.2		76892	31541789	NM_029788.2	0610013E23Rik	NP_084064.1	ILMN_2973337	005900646	S	3831	TGAGGACTGGGAAGGGACTGAAGGCAGGCACCACCGCATGTGGCAAGATG	11	+	86314599-86314648	11qC	Mus musculus RIKEN cDNA 0610013E23 gene (0610013E23Rik), mRNA.				AV007605; RP23-467J12.1	AV007605; RP23-467J12.1
Mus musculus	Riken	ILMN_203111	ILMN_203111	4930421F12RIK	ri|4930421F12|PX00030G05|AK076722|1091					AK076722	4930421F12Rik		ILMN_2554797	001340692	S	935	GGCGGGGTGGGAAGAACCGCATGAATGTACAGGACTTGTGTTTTCAAGTC										
Mus musculus	Riken	ILMN_205461	ILMN_205461	A430038C16RIK	ri|A430038C16|PX00135I16|AK039976|1380					AK039976	A430038C16Rik		ILMN_1216275	003840014	S	897	CAGCTCAACCGCACAATGCTGCTCCTTGATTGACACCCAGGGCCACAGAA										
Mus musculus	RefSeq	ILMN_200507	ILMN_200507	LOC383279	XM_356962.1	XM_356962.1			38082961	XM_356962.1	LOC383279		ILMN_1246439	005420338	S	356	GAGAAGGGCTAGCCAAGTGGAAGAGAGAAAGAGAACAGAGTCAGGGTGGG										
Mus musculus	RefSeq	ILMN_223198	ILMN_223198	CTRB1	NM_025583.1	NM_025583.1		66473	13385031	NM_025583.1	Ctrb1	NP_079859.1	ILMN_2919377	004560414	S	499	GGCTGGGGCAAGACCAAATACAATGCCCTCAAGACCCCTGACAAGCTGCA	8	-	114211100-114211134:114212445-114212459	8qE1	Mus musculus chymotrypsinogen B1 (Ctrb1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	2200008D09Rik; AI504462; Prt-2; Ctrb	2200008D09Rik; AI504462; Prt-2; Ctrb
Mus musculus	RefSeq	ILMN_259681	ILMN_259681	TMEM86B	NM_023440.2	NM_023440.2		68255	145301553	NM_023440.2	Tmem86b	NP_075929.1	ILMN_3162202	006250184	S	904	ACAGCCTGGTATCCCCTCCCATAGGGACCTTGGCTTTCCACACTGACCCA				7qA1	Mus musculus transmembrane protein 86B (Tmem86b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC118389; C330014O21Rik	MGC118389; C330014O21Rik
Mus musculus	RefSeq	ILMN_217395	ILMN_217395	OLFR356	NM_146624.1	NM_146624.1		258617	33239307	NM_146624.1	Olfr356	NP_666835.1	ILMN_2835255	004280687	S	565	TGTTCTAACACTTATGCCAACCAGTGTGTGCTGCTCTACTGGGGAGGAGC	2	+	36793205-36793254	2qB	Mus musculus olfactory receptor 356 (Olfr356), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR134-1	MOR134-1
Mus musculus	MEEBO	ILMN_221518	ILMN_221518	4631416L12RIK	scl22111.1_41	NM_175365.2			31341710	NM_175365.2	4631416L12Rik		ILMN_1244234	003830343	S	2450	CTGCCTTTGCATTGTAGTTTTGAAGAGGGCAGGGGTTATATTTGTGACTC										
Mus musculus	RefSeq	ILMN_198176	ILMN_198176	LOC210619	XM_140038.3	XM_140038.3			38082516	XM_140038.3	LOC210619		ILMN_1256607	006590273	S	2337	TCAGAGACAGTTGGAGGAGGACAGACTCTCGGGGCACTCCCTCCCGCGGT										
Mus musculus	RefSeq	ILMN_221627	ILMN_221627	TMEM41B	NM_153525.5	NM_153525.5		233724	146149164	NM_153525.5	Tmem41b	NP_705745.3	ILMN_2738090	004890400	S	3081	AGATTGAAACACTCCCTATCTTCGGTGCCAGAGATCCCAGGGCCTTGCAC				7qF1	Mus musculus transmembrane protein 41B (Tmem41b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1500015G02Rik; MGC38847; D7Ertd743e; 1500031M19Rik; D7Ertd70e; AU018901	1500015G02Rik; MGC38847; D7Ertd743e; 1500031M19Rik; D7Ertd70e; AU018901
Mus musculus	MEEBO	ILMN_212750	ILMN_212750	9530033F24RIK	scl41006.2_19	NM_201609.1			42475543	NM_201609.1	9530033F24Rik		ILMN_2629866	002650286	S	1696	GCGTGCTATTCAAACCACTCTGGTGTCTTGGAAAGATTGTACTGTGACAG										
Mus musculus	RefSeq	ILMN_219958	ILMN_219958	POU3F1	NM_011141.2	NM_011141.2		18991	145279231	NM_011141.2	Pou3f1	NP_035271.1	ILMN_1233172	005130176	S	1438	GCAGCGGTGCCTCCGGCGCGCAGTTAGCGCGCGCGGCCTGGACTCTTTTT				4qD2.2	Mus musculus POU domain, class 3, transcription factor 1 (Pou3f1), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; The process aimed at the progression of a Schwann cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14044] [evidence IMP]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22011] [evidence IGI]	Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]	Oct-6; Otf6; Scip; Tst1; Tst-1; Test1	Oct-6; Otf6; Scip; Tst1; Tst-1; Test1
Mus musculus	RefSeq	ILMN_187061	ILMN_187061	TNXB	NM_031176.1	NM_031176.1		81877	13928671	NM_031176.1	Tnxb	NP_112453.1	ILMN_2440823	001820070	S	11952	GTTCTCTGTGCCCTTCACGGAAATGAAGCTGCGACCCAGAAACTTCCAGG	17	+	34832358-34832407	17qB1	Mus musculus tenascin XB (Tnxb), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; Any collagen polymer in which collagen triple helices associate to form fibrils [goid 5583] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence ISS]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; Any process that modulates the frequency, rate or extent of JUN kinase activity [goid 43506] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IDA]	Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	Tnx; tenascin-X	Tnx; tenascin-X
Mus musculus	RefSeq	ILMN_187061	ILMN_187061	TNXB	NM_031176.1	NM_031176.1		81877	13928671	NM_031176.1	Tnxb	NP_112453.1	ILMN_2444411	001690059	S	11752	GCAGGCGACTCTATGAGCTACCACAGTGGCAGTGTCTTTTCTGCCCGTGA	17	+	34832457-34832506	17qB1	Mus musculus tenascin XB (Tnxb), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; Any collagen polymer in which collagen triple helices associate to form fibrils [goid 5583] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence ISS]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; Any process that modulates the frequency, rate or extent of JUN kinase activity [goid 43506] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IDA]	Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	Tnx; tenascin-X	Tnx; tenascin-X
Mus musculus	RefSeq	ILMN_187061	ILMN_187061	TNXB	NM_031176.1	NM_031176.1		81877	13928671	NM_031176.1	Tnxb	NP_112453.1	ILMN_2492671	004220593	S	9772	ACGGTGTCCTTGGCTGCAGACCAGCGAGAGGTCACCATAGAGGGTCTACA	17	+	34827305-34827354	17qB1	Mus musculus tenascin XB (Tnxb), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; Any collagen polymer in which collagen triple helices associate to form fibrils [goid 5583] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence ISS]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; Any process that modulates the frequency, rate or extent of JUN kinase activity [goid 43506] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IDA]	Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	Tnx; tenascin-X	Tnx; tenascin-X
Mus musculus	RefSeq	ILMN_187061	ILMN_187061	TNXB	NM_031176.1	NM_031176.1		81877	13928671	NM_031176.1	Tnxb	NP_112453.1	ILMN_1230470	001260372	S	5	CTTGACTGACGGATCTGCCCTTCTACACTGGAAACCCCCCCACAAACCAG	17	+	34807484-34807533	17qB1	Mus musculus tenascin XB (Tnxb), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; Any collagen polymer in which collagen triple helices associate to form fibrils [goid 5583] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence ISS]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; Any process that modulates the frequency, rate or extent of JUN kinase activity [goid 43506] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IDA]	Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	Tnx; tenascin-X	Tnx; tenascin-X
Mus musculus	RefSeq	ILMN_193981	ILMN_187061	TNXB	NM_031176.1	NM_031176.1		81877	13928671	NM_031176.1	Tnxb	NP_112453.1	ILMN_2502227	006550300	S	11998	GGAAGTTTCTGGGTCGCAGCTTCATTTCCGTGAAGGGCACAGAGAACTCG	17	+	34832404-34832453	17qB1	Mus musculus tenascin XB (Tnxb), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; Any collagen polymer in which collagen triple helices associate to form fibrils [goid 5583] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence ISS]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; Any process that modulates the frequency, rate or extent of JUN kinase activity [goid 43506] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IDA]	Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	Tnx; tenascin-X	Tnx; tenascin-X
Mus musculus	RefSeq	ILMN_187061	ILMN_187061	TNXB	NM_031176.1	NM_031176.1		81877	13928671	NM_031176.1	Tnxb	NP_112453.1	ILMN_2973958	002850050	S	11956	TCTGTGCCCTTCACGGAAATGAAGCTGCGACCCAGAAACTTCCAGGTCCC	17	+	34832362-34832411	17qB1	Mus musculus tenascin XB (Tnxb), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; Any collagen polymer in which collagen triple helices associate to form fibrils [goid 5583] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence ISS]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [evidence IMP]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; Any process that modulates the frequency, rate or extent of JUN kinase activity [goid 43506] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IDA]	Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]	Tnx; tenascin-X	Tnx; tenascin-X
Mus musculus	RefSeq	ILMN_201321	ILMN_237625	LOC546212	XM_001004591.1	XM_001004591.1		546212	94419901	XM_001004591.1	LOC546212	XP_001004591.1	ILMN_1258429	001710041	S	1556	GGAGGCCTGAGCTTCAGCAAGATTTCCAGAACCTGGTGCACCTTGGAAGG				8qB1.3	PREDICTED: Mus musculus similar to Transcription elongation factor B polypeptide 3 (RNA polymerase II transcription factor SIII subunit A1) (SIII p110) (Elongin A) (EloA) (Elongin 110 kDa subunit) (LOC546212), mRNA.					
Mus musculus	RefSeq	ILMN_218422	ILMN_218422	CAPN3	NM_007601.1	NM_007601.1		12335	6680843	NM_007601.1	Capn3	NP_031627.1	ILMN_2771518	000150220	S	2298	CGCCATGCGCTATGCGGACAAACACATGAACATCGACTTTGACAGCTTCA	2	+	120329119-120329168	2qE5	Mus musculus calpain 3 (Capn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [evidence IMP]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	Capa3; p94; Lp82; AI323605; Capa-3	Capa3; p94; Lp82; AI323605; Capa-3
Mus musculus	RefSeq	ILMN_218422	ILMN_218422	CAPN3	NM_007601.1	NM_007601.1		12335	6680843	NM_007601.1	Capn3	NP_031627.1	ILMN_2867771	006420209	S	2036	CAGTGGTGAACAAACACAAGGACCTGAAGACACAAGGGTTCACGCTGGAG	2	+	120328166-120328180:120328265-120328299	2qE5	Mus musculus calpain 3 (Capn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [evidence IMP]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	Capa3; p94; Lp82; AI323605; Capa-3	Capa3; p94; Lp82; AI323605; Capa-3
Mus musculus	RefSeq	ILMN_218422	ILMN_218422	CAPN3	NM_007601.1	NM_007601.1		12335	6680843	NM_007601.1	Capn3	NP_031627.1	ILMN_2695626	002710379	S	850	GGGGAGTTGATTGCACGGATGGTGAGAAATATGGATAACTCGCTGCTCAG	2	+	120312117-120312166	2qE5	Mus musculus calpain 3 (Capn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [evidence IMP]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	Capa3; p94; Lp82; AI323605; Capa-3	Capa3; p94; Lp82; AI323605; Capa-3
Mus musculus	MEEBO	ILMN_215611	ILMN_215611	MAPK3	scl0026417.1_62	NM_011952.1			21489932	NM_011952.1	Mapk3		ILMN_2715744	006580470	S	1256	GCAGCCCAGGCTGGACCAAGGGTGGGCCTGGCCACCTTCTCTCACTTTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence TAS]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IMP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IPI]; Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IMP]		
Mus musculus	RefSeq	ILMN_201088	ILMN_201088	LOC381996	XM_358686.1	XM_358686.1			38089006	XM_358686.1	LOC381996		ILMN_2541035	000010373	S	224	CTTCCAAAGTGCTGTGGAGGCACAATCACCGGTGCGGACACAGAGCTCTC										
Mus musculus	RefSeq	ILMN_201632	ILMN_311246	LOC100046770	XM_001476780.1	XM_001476780.1		100046770	149264153	XM_001476780.1	LOC100046770	XP_001476830.1	ILMN_1212989	003370711	S	2207	CAGCAGGAAGCCCCGTTTGTAATGTGCGTTGCGCTGCTTTACCGTACACC					PREDICTED: Mus musculus similar to histone macroH2A1.2 (LOC100046770), mRNA.					
Mus musculus	RefSeq	ILMN_216556	ILMN_311246	LOC100046770	XM_001476780.1	XM_001476780.1		100046770	149264153	XM_001476780.1	LOC100046770	XP_001476830.1	ILMN_1247199	004570609	S	1389	GTTCAGGCTGACATTGCCTCGATCGACAGTGATGCTGTCGTTCACCCGAC					PREDICTED: Mus musculus similar to histone macroH2A1.2 (LOC100046770), mRNA.					
Mus musculus	Riken	ILMN_206820	ILMN_206820	D930026C10RIK	ri|D930026C10|PX00202O02|AK086407|2041					AK086407	D930026C10Rik		ILMN_1228945	002630450	S	1714	TCAAGATTCAGTAGGTTCTTCCATAATCCCCCAGAAGTGGGTCATCACCC										
Mus musculus	RefSeq	ILMN_210119	ILMN_210119	NTN2L	NM_010947.3	NM_010947.3		18209	62990172	NM_010947.3	Ntn2l	NP_035077.1	ILMN_2615312	006840487	S	3997	GCAGGCATAGGTTGGCCATTTGGGCGGTTGTGTTGCTGTCTTTCCAAGGT	17	-	24341640-24341689	17qA3.3	Mus musculus netrin 2-like (chicken) (Ntn2l), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence TAS]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence ISA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]	Ntn3	Ntn3
Mus musculus	RefSeq	ILMN_210119	ILMN_210119	NTN2L	NM_010947.3	NM_010947.3		18209	62990172	NM_010947.3	Ntn2l	NP_035077.1	ILMN_1220826	005290465	S	2384	GGCTGATACCCGACGTCTCTTAAAGGTGTGAACCCGCCTATTCCCAGGGG	17	-	24343253-24343302	17qA3.3	Mus musculus netrin 2-like (chicken) (Ntn2l), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence TAS]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence ISA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]	Ntn3	Ntn3
Mus musculus	RefSeq	ILMN_208803	ILMN_208803	EMB	NM_010330.3	NM_010330.3		13723	142364821	NM_010330.3	Emb	NP_034460.2	ILMN_1218799	000270341	S	2077	GGAGGACTAGTGCACTATCTTTATGTTGCTGCGAATGCCTTAGACTTAAC	13	+	118062736-118062785	13qD2.3	Mus musculus embigin (Emb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC21425; Gp70; AL022799	MGC21425; Gp70; AL022799
Mus musculus	RefSeq	ILMN_213080	ILMN_313349	LOC100045677	XR_031705.1	XR_031705.1		100045677	149233667	XR_031705.1	LOC100045677		ILMN_2633377	002360193	S	2248	ACTGACGATTCCCAAGAGAAGACCGATGATTCTCAGGAGACCCAGGACTC					PREDICTED: Mus musculus similar to DNA replication licensing factor MCM3 (DNA polymerase alpha holoenzyme-associated protein P1) (P1-MCM3) (LOC100045677), misc RNA.					
Mus musculus	RefSeq	ILMN_199920	ILMN_199920	LOC384064	XM_357397.1	XM_357397.1			38078985	XM_357397.1	LOC384064		ILMN_2536961	000670735	S	1577	GAGTCAGAAGCGACTCCACAGCTCAGGAAGACAAACTGACCCCCTGGGGA										
Mus musculus	RefSeq	ILMN_189017	ILMN_314177	SCGB2B1	XM_001481266.1	XM_001481266.1		353109	149257032	XM_001481266.1	Scgb2b1	XP_001481316.1	ILMN_2457640	007570564	S	278	GTGGCTCCATAAGGTCCATTTTAGACCTTCTTTCCAAGTTATTAGAGGAA				7qB1	PREDICTED: Mus musculus secretoglobin, family 2B, member 1 (Scgb2b1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_189710	ILMN_314177	SCGB2B1	XM_001481266.1	XM_001481266.1		353109	149257032	XM_001481266.1	Scgb2b1	XP_001481316.1	ILMN_2463706	002350364	S	284	CCATAAGGTCCATTTTAGACCTTCTTTCCAAGTTATTAGAGGAATAGAAG				7qB1	PREDICTED: Mus musculus secretoglobin, family 2B, member 1 (Scgb2b1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_214301	ILMN_214301	OGG1	NM_010957.2	NM_010957.2		18294	18921207	NM_010957.2	Ogg1	NP_035087.2	ILMN_2991864	004220398	S	1001	CCAGGCTGTGCCCGTGGATGTCCATGTATGGCAGATTGCCCATCGTGACT	6	+	113299157-113299206	6qE3	Mus musculus 8-oxoguanine DNA-glycosylase 1 (Ogg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IDA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [evidence IDA]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the removal of oxidized bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 702] [evidence TAS]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [evidence IEA]; Catalysis of the removal of 8-oxo-7,8-dihydroguanine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar [goid 34039] [evidence IMP]	Mmh	Mmh
Mus musculus	RefSeq	ILMN_190405	ILMN_239984	1700029I15RIK	NM_183112.2	NM_183112.2		75641	142354381	NM_183112.2	1700029I15Rik	NP_898935.1	ILMN_2632536	002340347	S	300	GGCTGACTATTACTATGATGTGAACCTGTGATGGGAACCCCGCATAAAGC	2	+	92223696-92223726:92223727-92223745	2qE1	Mus musculus RIKEN cDNA 1700029I15 gene (1700029I15Rik), mRNA.				RP23-316M14.6; 1700021K07Rik	RP23-316M14.6; 1700021K07Rik
Mus musculus	RefSeq	ILMN_211445	ILMN_211445	MMP8	NM_008611.3	NM_008611.3		17394	141801809	NM_008611.3	Mmp8	NP_032637.2	ILMN_1241378	005820671	S	2089	GAGCCATAAGTGCATACATATGTTCTTATAAAACGGAGTGAGAGGTGTGG	9	+	7568153-7568202	9qA1	Mus musculus matrix metallopeptidase 8 (Mmp8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	BB138268	BB138268
Mus musculus	RefSeq	ILMN_214251	ILMN_214251	PARK2	NM_016694.3	NM_016694.3		50873	118131140	NM_016694.3	Park2	NP_057903.1	ILMN_1240999	005270326	S	7	TAAACCTGACAGAAACGCTGGTGGGAGGCTCGGGCGGGCGCCAGTGCCCG	17	+	11033256-11033305	17qA1	Mus musculus Parkinson disease (autosomal recessive, juvenile) 2, parkin (Park2), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42415] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IMP]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The directed movement of dopamine into a cell, typically presynaptic neurons or glial cells. Dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 51583] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	MGC130518; PRKN	MGC130518; PRKN
Mus musculus	RefSeq	ILMN_214251	ILMN_214251	PARK2	NM_016694.3	NM_016694.3		50873	118131140	NM_016694.3	Park2	NP_057903.1	ILMN_1216086	005910524	S	2971	GTGATTCTTAAAATAACCCAAAAGACAGGCATCCACAGTGTGTGAGCATG	17	+	12255996-12256045	17qA1	Mus musculus Parkinson disease (autosomal recessive, juvenile) 2, parkin (Park2), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42415] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IMP]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The directed movement of dopamine into a cell, typically presynaptic neurons or glial cells. Dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 51583] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	MGC130518; PRKN	MGC130518; PRKN
Mus musculus	RefSeq	ILMN_214251	ILMN_214251	PARK2	NM_016694.3	NM_016694.3		50873	118131140	NM_016694.3	Park2	NP_057903.1	ILMN_2773074	005890201	S	1616	GGCTGCAGATTACAGAAGCAGCCCCTAGATCCTTTCCAGGGCACCCACAG	17	+	12254641-12254690	17qA1	Mus musculus Parkinson disease (autosomal recessive, juvenile) 2, parkin (Park2), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IMP]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The chemical reactions and pathways involving norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42415] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IMP]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The directed movement of dopamine into a cell, typically presynaptic neurons or glial cells. Dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 51583] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	MGC130518; PRKN	MGC130518; PRKN
Mus musculus	RefSeq	ILMN_187223	ILMN_187223	TREX1	NM_011637.6	NM_011637.6		22040	59624978	NM_011637.6	Trex1	NP_035767.4	ILMN_3131766	005270475	A	851	CCACAGCCAATGGAAGTCCCAGCAATGGCAGGAGCAGGCGACCTAAGAGT	9	-	108960619-108960668	9qF2	Mus musculus three prime repair exonuclease 1 (Trex1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Interacting selectively with the mismatch repair complex MutLalpha [goid 32405] [evidence ISA]; Interacting selectively with the mismatch repair complex MutSalpha [goid 32407] [evidence ISA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]; Interacting selectively with an adenyl deoxyribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety [goid 32558] [evidence IDA]	1661; AU041952	1661; AU041952
Mus musculus	RefSeq	ILMN_219544	ILMN_226393	BC049702	NM_207524.3	NM_207524.3		278255	145966748	NM_207524.3	BC049702	NP_997407.1	ILMN_2710266	001580546	S	605	CAGGCACTCCACCAAGGCCTCTAATTGTGAAAGAAAATGGAGAGGCTCTG				XqA1.3	Mus musculus cDNA sequence BC049702 (BC049702), mRNA.				Gm720; MGC58623	Gm720; MGC58623
Mus musculus	MEEBO	ILMN_211920	ILMN_211920	4932413O14RIK	scl26365.27.1_4	NM_177230.2			31343123	NM_177230.2	4932413O14Rik		ILMN_2620757	004200682	S	3542	GCTGACACCCGATTAATTGTGGTGTTACTTATAATTAGTGCCCTGTGAAC										
Mus musculus	RefSeq	ILMN_220568	ILMN_231377	1700071A11RIK	XM_973359.1	XM_973359.1		76611	94386116	XM_973359.1	1700071A11Rik	XP_978453.1	ILMN_1250427	006270079	S	623	ACATTTATGTGCTCGCGCTAATGTGGATACTCTGCGTCCTGAGTTTCTGC	9	-	54996534-54996583	9qB	PREDICTED: Mus musculus RIKEN cDNA 1700071A11 gene (1700071A11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217918	ILMN_217918	CD7	NM_009854.1	NM_009854.1		12516	6806904	NM_009854.1	Cd7	NP_033984.1	ILMN_1252079	001990427	S	672	AACCAGTACCAGTGAACCCCTCTGCCTGCAGTCCCCCGTGCCTTGTTTCA	11	-	120898321-120898356:120898357-120898370	11qE2	Mus musculus CD7 antigen (Cd7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220703	ILMN_220703	FURIN	NM_011046.2	NM_011046.2		18550	125347019	NM_011046.2	Furin	NP_035176.1	ILMN_3069914	004920703	I	183	GAGCGGCCGCGGCGCTCGTCCGGAAAAGTTTCCCCGCCCGGGCTCCCCAG	7	-	87547416-87547465	7qD3	Mus musculus furin (paired basic amino acid cleaving enzyme) (Furin), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence TAS]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence ISO]; The lipid bilayer surrounding a vesicle transporting substances between the trans-Golgi network and other parts of the cell [goid 12510] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PACE; Pcsk3; Fur; 9130404I01Rik; SPC1	PACE; Pcsk3; Fur; 9130404I01Rik; SPC1
Mus musculus	RefSeq	ILMN_220703	ILMN_220703	FURIN	NM_011046.2	NM_011046.2		18550	125347019	NM_011046.2	Furin	NP_035176.1	ILMN_3148489	006960189	A	4119	CACCCCTCACGGCCATCCAGGCTGGTTTTGTAAGATGCTGGGTTGGTGCA	7	-	87534197-87534246	7qD3	Mus musculus furin (paired basic amino acid cleaving enzyme) (Furin), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence TAS]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence ISO]; The lipid bilayer surrounding a vesicle transporting substances between the trans-Golgi network and other parts of the cell [goid 12510] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PACE; Pcsk3; Fur; 9130404I01Rik; SPC1	PACE; Pcsk3; Fur; 9130404I01Rik; SPC1
Mus musculus	RefSeq	ILMN_220703	ILMN_220703	FURIN	NM_011046.2	NM_011046.2		18550	125347019	NM_011046.2	Furin	NP_035176.1	ILMN_1252364	003840020	S	3983	CTGATGTGCCTTTTGCACCCTTCCCATTAGGACAATCAGTCCCCTCCCAC	7	-	87534333-87534382	7qD3	Mus musculus furin (paired basic amino acid cleaving enzyme) (Furin), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence TAS]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence ISO]; The lipid bilayer surrounding a vesicle transporting substances between the trans-Golgi network and other parts of the cell [goid 12510] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PACE; Pcsk3; Fur; 9130404I01Rik; SPC1	PACE; Pcsk3; Fur; 9130404I01Rik; SPC1
Mus musculus	RefSeq	ILMN_215354	ILMN_215354	OBOX6	NM_145710.2	NM_145710.2		252830	124517671	NM_145710.2	Obox6	NP_663756.2	ILMN_1220159	006100521	S	838	GGAGCCAGGAATCTTCTCCGCCTCATTATCAGGCCTGTGATAGTGCCAGG	7	-	16419047-16419096	7qA2	Mus musculus oocyte specific homeobox 6 (Obox6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D17Ertd599e	D17Ertd599e
Mus musculus	RefSeq	ILMN_189601	ILMN_251150	TBC1D17	NM_001042655.1	NM_001042655.1		233204	111120336	NM_001042655.1	Tbc1d17	NP_001036120.1	ILMN_2611993	004900674	S	1669	GGCTCGCTGTGCTTCTGTTTCCGGTGGCTGCTCATCTGGTTCAAGAGGGA	7	-	52097606-52097655	7qB4	Mus musculus TBC1 domain family, member 17 (Tbc1d17), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	BC017607; MGC27642	BC017607; MGC27642
Mus musculus	RefSeq	ILMN_196611	ILMN_196611	AAK1	NM_177762.5	NM_177762.5		269774	91992158	NM_177762.5	Aak1	NP_808430.2	ILMN_3127491	003190301	A	7425	CGCAGAGTTCCCAAAGGTTGGTAGGAGGGAAGTCCTTCGTTGCTTCTCAC				6qD1	Mus musculus AP2 associated kinase 1 (Aak1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA1048; AU067724; R75501; 5530400K14Rik; 9630042K20; C79663; MGC40785; AU067726; BC028270; D6Ertd245e	mKIAA1048; AU067724; R75501; 5530400K14Rik; 9630042K20; C79663; MGC40785; AU067726; BC028270; D6Ertd245e
Mus musculus	RefSeq	ILMN_209778	ILMN_209778	ALDOA	NM_007438.3	NM_007438.3		11674	59709447	NM_007438.3	Aldoa	NP_031464.1	ILMN_2599130	001690537	S	1105	TGGGAAGAAGGAGAACCTGAAGGCAGCCCAGGAGGAGTACATCAAGCGCG	7	-	133939131-133939180	7qF3	Mus musculus aldolase A, fructose-bisphosphate (Aldoa), mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate [goid 4332] [evidence IDA]	Aldo-1; MGC107164; Aldo1	Aldo-1; MGC107164; Aldo1
Mus musculus	RefSeq	ILMN_205884	ILMN_330742	LOC100039521	XR_031063.1	XR_031063.1		100039521	149253987	XR_031063.1	LOC100039521		ILMN_1215377	001190438	S	801	CTGGTGGAGCACTTTACCTGCCTAGCTTATAGCAACGGCCACACACAGAG	5	+	86496637-86496686	5qE1	PREDICTED: Mus musculus similar to RNA polymerase I associated factor (Paf53) (LOC100039521), misc RNA.					
Mus musculus	RefSeq	ILMN_209976	ILMN_209976	GM839	NM_201356.1	NM_201356.1		330379	41235726	NM_201356.1	Gm839	NP_958744.1	ILMN_2601009	002750296	S	144	ACTCCCAAAGCCATTTGTTGGCTCAAATTCTGATAGGGTCCAACTCAGGC	6	-	89164777-89164826	6qD1	Mus musculus gene model 839, (NCBI) (Gm839), mRNA.					
Mus musculus	RefSeq	ILMN_184277	ILMN_311642	LOC100044322	XM_001471968.1	XM_001471968.1		100044322	149233935	XM_001471968.1	LOC100044322	XP_001472018.1	ILMN_2417316	004010554	S	721	GTCTTCAGGGTTGGCTCAGTGCAGTTGCTAAGCAAATCAGTCTTCAGGAG					PREDICTED: Mus musculus similar to UDP-glucose ceramide glucosyltransferase-like 1 (LOC100044322), mRNA.					
Mus musculus	RefSeq	ILMN_200605	ILMN_200605	LOC384382	XM_357613.1	XM_357613.1			38084251	XM_357613.1	LOC384382		ILMN_1255679	003840546	S	557	GCAGGGAAGAAACTACCTGTGGGACTGTGGCGCACGTTTGGGATCTCTGC										
Mus musculus	MEEBO	ILMN_184291	ILMN_184291	1810044D09RIK	scl29745.2.1_5						1810044D09Rik		ILMN_2417430	000650292	S	14	AACAGAAAACTGTCAGTCACTGCGGGAATGTGCCTCCCTGATCGCCGCGA										
Mus musculus	MEEBO	ILMN_186331	ILMN_186331	0610039K10RIK	scl19955.1.2_15						0610039K10Rik		ILMN_2434621	005340379	S	2	GAGAGATGGAATGTTGGCAAACTCAGAGGCAAACAGGCTATGTTGGGCCA										
Mus musculus	RefSeq	ILMN_216369	ILMN_216369	VWA2	NM_172840.2	NM_172840.2		240675	42741660	NM_172840.2	Vwa2	NP_766428.2	ILMN_1222725	000990471	S	3579	CCCGTCTCTGACCCACATTTTCTTCCTTCACATTTATACACTGGGGATGT	19	+	56986265-56986314	19qD2	Mus musculus von Willebrand factor A domain containing 2 (Vwa2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	Amaco	Amaco
Mus musculus	RefSeq	ILMN_216369	ILMN_216369	VWA2	NM_172840.2	NM_172840.2		240675	42741660	NM_172840.2	Vwa2	NP_766428.2	ILMN_2868838	002900605	S	3451	CGCTCTGGGAGATGAGAAGCATTGGTAAGGGTGTGTATCTTTGTGCAGCC	19	+	56986137-56986186	19qD2	Mus musculus von Willebrand factor A domain containing 2 (Vwa2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	Amaco	Amaco
Mus musculus	RefSeq	ILMN_216369	ILMN_216369	VWA2	NM_172840.2	NM_172840.2		240675	42741660	NM_172840.2	Vwa2	NP_766428.2	ILMN_1249134	006980154	S	2234	GGCAGCTTACACAGACCTTCCGTACCATCAGGACATGCTCATCGAGTGGC	19	+	56983815-56983864	19qD2	Mus musculus von Willebrand factor A domain containing 2 (Vwa2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]	Amaco	Amaco
Mus musculus	RefSeq	ILMN_187684	ILMN_237798	BDNF	NM_001048139.1	NM_001048139.1		12064	114326456	NM_001048139.1	Bdnf	NP_001041604.1	ILMN_2446230	005130168	S	441	GAAATGCAAGTGTTTATCACCAGGATCTAGCCACCGGGGTGGTGTAAGCC	2	+	109516494-109516543	2qE3	Mus musculus brain derived neurotrophic factor (Bdnf), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis in neurons [goid 43523] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IMP]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IPI]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The response of an organism to a perceived external threat [goid 42596] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Behavior associated with the intake of food [goid 7631] [evidence IMP]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IDA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IDA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_211054	ILMN_211054	4930477M19	scl21750.9_632	NM_177729.2			31343180	NM_177729.2	4930477M19		ILMN_1231601	005820767	S	2462	GCGACATCATATCCGCAAATTCCAGTAAAGGGTGTCCCACACTCCAAAGC										
Mus musculus	RefSeq	ILMN_196760	ILMN_196760	IFNA2	NM_010503.2	NM_010503.2		15965	126722648	NM_010503.2	Ifna2	NP_034633.2	ILMN_2627956	004780563	S	225	AGCCATCCCTGTGCTGCGAGATCTTACTCAGCAGACCTTGAACCTCTTCA	4	-	88329409-88329458	4qC4	Mus musculus interferon alpha 2 (Ifna2), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	Ifa2	Ifa2
Mus musculus	RefSeq	ILMN_196760	ILMN_196760	IFNA2	NM_010503.2	NM_010503.2		15965	126722648	NM_010503.2	Ifna2	NP_034633.2	ILMN_1233138	006060020	S	121	CTGGCACAGATGAGGAGGCTCCCCTTTCTCTCCTGCCTGAAGGACAGGCA	4	-	88329513-88329562	4qC4	Mus musculus interferon alpha 2 (Ifna2), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IEA]	Ifa2	Ifa2
Mus musculus	MEEBO	ILMN_213559	ILMN_213559	SLC29A1	scl0001641.1_31				13435992	BC004828	Slc29a1		ILMN_2638299	005310719	S	92	GAACGCCCAGGTACCTTTGGCTCTCACCGTCCTGCCAACATCGAGTCTAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), into, out of, within or between cells [goid 15858] [evidence IDA]	Catalysis of the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other [goid 5337] [evidence IDA]		
Mus musculus	RefSeq	ILMN_190711	ILMN_255310	DBC1	NM_019967.2	NM_019967.2		56710	85677500	NM_019967.2	Dbc1	NP_064351.2	ILMN_2472606	001190364	S	2904	GGAAGCTAACGTGTTCTAGCGACTGTATAAAACCGTGGGGCATGTCTCTT	4	-	68422806-68422855	4qC1	Mus musculus deleted in bladder cancer 1 (human) (Dbc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		Brinp1; BRINP; Dbccr1	Brinp1; BRINP; Dbccr1
Mus musculus	RefSeq	ILMN_190711	ILMN_255310	DBC1	NM_019967.2	NM_019967.2		56710	85677500	NM_019967.2	Dbc1	NP_064351.2	ILMN_2643648	006250397	S	2336	GGGCCCGGTGGACCTGTCGGATCCCTCCAAAAGGCAGTTCTACATCAAGA	4	-	68423374-68423423	4qC1	Mus musculus deleted in bladder cancer 1 (human) (Dbc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		Brinp1; BRINP; Dbccr1	Brinp1; BRINP; Dbccr1
Mus musculus	RefSeq	ILMN_198029	ILMN_198029	LOC277924	XM_204249.2	XM_204249.2			38080520	XM_204249.2	LOC277924		ILMN_1255452	004290646	S	3925	AGAGGAACAGTCCTCCATTGTTGCTGGAAAGAGCCCAGATGTCCCTCAAC										
Mus musculus	MEEBO	ILMN_209565	ILMN_209565	5730494M16RIK	scl51583.7.1_258	XM_203706.2			28524143	XM_203706.2	5730494M16Rik		ILMN_2597022	005270369	S	1876	CCTAGACCAGGAATGCTTAAAGGTGTGATCCCTAGACTTAGAATTGTGCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_235326	ILMN_235326	KLHL34	NM_001081667.1	NM_001081667.1		245683	126157474	NM_001081667.1	Klhl34	NP_001075136.1	ILMN_2965737	004280068	S	1425	TGTGTACATCTCCGGGGGCAAGGCTGGGAGAGGTGAAGGAGGCACAAGTA	X	+	154257791-154257840	XqF4	Mus musculus kelch-like 34 (Drosophila) (Klhl34), mRNA.				Gm388	Gm388
Mus musculus	RefSeq	ILMN_198710	ILMN_235326	KLHL34	NM_001081667.1	NM_001081667.1		245683	126157474	NM_001081667.1	Klhl34	NP_001075136.1	ILMN_1242984	004010132	S	1763	CAACCCGGAACGTAGTGGGCTATGACCTGGACCTGGACCGTTGGGAAGAT	X	+	154258129-154258178	XqF4	Mus musculus kelch-like 34 (Drosophila) (Klhl34), mRNA.				Gm388	Gm388
Mus musculus	RefSeq	ILMN_223452	ILMN_223452	OLFR1231	NM_146454.1	NM_146454.1		258446	33239025	NM_146454.1	Olfr1231	NP_666665.1	ILMN_1226324	004850438	S	648	CATCTCATACATAGTTATCCTGCGATCCTTGAAGTCTCATAGTTCTGAAG	2	-	89143050-89143099	2qE1	Mus musculus olfactory receptor 1231 (Olfr1231), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR235-2	MOR235-2
Mus musculus	RefSeq	ILMN_221720	ILMN_221720	CLEC4A2	NM_011999.2	NM_011999.2		26888	31560509	NM_011999.2	Clec4a2	NP_036129.1	ILMN_2819015	003460168	S	2017	AAGGCAGCATATTAGACACAAGATACTCTGACTAAATTGGCATAGAGAAG	6	+	123109230-123109279	6qF2	Mus musculus C-type lectin domain family 4, member a2 (Clec4a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence TAS]	Dcir1; DCIR; Clecsf6	Dcir1; DCIR; Clecsf6
Mus musculus	RefSeq	ILMN_190057	ILMN_242919	PAPSS2	NM_011864.3	NM_011864.3		23972	118130006	NM_011864.3	Papss2	NP_035994.2	ILMN_2466809	004260148	S	3388	TACTGTGACCACAGCAAAGTGAGTCTTCGACTGTATGGCGCCTGTGCTCA	19	+	32741430-32741479	19qC1	Mus musculus 3'-phosphoadenosine 5'-phosphosulfate synthase 2 (Papss2), mRNA.		The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds [goid 103] [evidence IDA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: ATP + adenylylsulfate = ADP + 3'-phosphoadenosine 5'-phosphosulfate [goid 4020] [evidence IDA]; Catalysis of the reaction: ATP + SO4(2-) (sulfate) = diphosphate + adenylylsulfate [goid 4781] [evidence IDA]	AI159688; 1810018P12Rik; bm; code642; AtpsU2; Atpsk2; Sk2	AI159688; 1810018P12Rik; bm; code642; AtpsU2; Atpsk2; Sk2
Mus musculus	RefSeq	ILMN_184209	ILMN_242919	PAPSS2	NM_011864.3	NM_011864.3		23972	118130006	NM_011864.3	Papss2	NP_035994.2	ILMN_2638349	002710739	S	1868	AGCAAGGCACGAGGAGTTTGACTTCATCTCAGGAACTCGCATGAGGAAGC	19	+	32739135-32739140:32739916-32739959	19qC1	Mus musculus 3'-phosphoadenosine 5'-phosphosulfate synthase 2 (Papss2), mRNA.		The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds [goid 103] [evidence IDA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: ATP + adenylylsulfate = ADP + 3'-phosphoadenosine 5'-phosphosulfate [goid 4020] [evidence IDA]; Catalysis of the reaction: ATP + SO4(2-) (sulfate) = diphosphate + adenylylsulfate [goid 4781] [evidence IDA]	AI159688; 1810018P12Rik; bm; code642; AtpsU2; Atpsk2; Sk2	AI159688; 1810018P12Rik; bm; code642; AtpsU2; Atpsk2; Sk2
Mus musculus	MEEBO	ILMN_220460	ILMN_220460	4632408A20RIK	scl42988.4_256	XM_126946.2			38050482	XM_126946.2	4632408A20Rik		ILMN_1247032	000050424	S	3092	TCTCTGAGCGGTAGGCTAAGAACTCTTGCATCTTGCATGCTGTCCCACTG										
Mus musculus	Riken	ILMN_203709	ILMN_203709	9630046P06RIK	ri|9630046P06|PX00116F20|AK036231|2995					AK036231	9630046P06Rik		ILMN_2559384	007650274	S	2550	GCCCTGATGGAAGTCCAGTCGGTCTTTTTTGACTGCCTCTGCCTGTAGAT										
Mus musculus	RefSeq	ILMN_243159	ILMN_243159	FOXD2	NM_008593.1	NM_008593.1		17301	6679838	NM_008593.1	Foxd2	NP_032619.1	ILMN_2815867	005260291	S	1434	TGGCTGGCCATATCCGCCTCTCGCACCCAGGGGACTCACTCCTGTCTTCA	4	-	114405322-114405371	4qD1	Mus musculus forkhead box D2 (Foxd2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Mf2	Mf2
Mus musculus	RefSeq	ILMN_194187	ILMN_248665	CWF19L1	NM_001081077.1	NM_001081077.1		72502	124487290	NM_001081077.1	Cwf19l1	NP_001074546.1	ILMN_1243695	006200543	S	2727	GGTGATTGGGCTTCGGGAACAGCCAGGGTATGGACCAGAGTGAACTTACA	19	-	44183931-44183980	19qC3	Mus musculus CWF19-like 1, cell cycle control (S. pombe) (Cwf19l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI854304; AV336991; 2610528C06Rik	AI854304; AV336991; 2610528C06Rik
Mus musculus	RefSeq	ILMN_194187	ILMN_248665	CWF19L1	NM_001081077.1	NM_001081077.1		72502	124487290	NM_001081077.1	Cwf19l1	NP_001074546.1	ILMN_1257336	002510414	S	1971	GGGTATGGTGGCTCATGTCGCTCTTCTCAGAAACTGAACGGTTATGGCTG	19	-	44184687-44184736	19qC3	Mus musculus CWF19-like 1, cell cycle control (S. pombe) (Cwf19l1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI854304; AV336991; 2610528C06Rik	AI854304; AV336991; 2610528C06Rik
Mus musculus	RefSeq	ILMN_185822	ILMN_185822	XPA	NM_011728.1	NM_011728.1		22590	7106448	NM_011728.1	Xpa	NP_035858.1	ILMN_1243334	003780703	S	2	GCGACTGTTGTGCTAAATAACTACCACAGATCGAGTGTATAGTGCTCCTG	4	-	46209132-46209181	4qB1	Mus musculus xeroderma pigmentosum, complementation group A (Xpa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]	AI573865; Xpac	AI573865; Xpac
Mus musculus	RefSeq	ILMN_185822	ILMN_185822	XPA	NM_011728.1	NM_011728.1		22590	7106448	NM_011728.1	Xpa	NP_035858.1	ILMN_2968515	000540762	S	637	GCTACAGGTGGTAAAGCGGGCTCTTGAAGTGTGGGGTAGCCAGGAAGCTC	4	-	46196064-46196107:46197160-46197165	4qB1	Mus musculus xeroderma pigmentosum, complementation group A (Xpa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]	AI573865; Xpac	AI573865; Xpac
Mus musculus	RefSeq	ILMN_215312	ILMN_215312	IL1RL1	NM_010743.1	NM_010743.1		17082	7106346	NM_010743.1	Il1rl1	NP_034873.1	ILMN_2757617	003870291	S	2404	CCCCTATTCTCACCCAGTTTGACCTTGATTCCACAATGCCTTCCTCTGTA	1	+	40504722-40504771	1qB	Mus musculus interleukin 1 receptor-like 1 (Il1rl1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43124] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with interleukin-33 [goid 2113] [evidence IPI]; Combining with interleukin-33 to initiate a change in cell activity [goid 2114] [evidence IPI]	T1/ST2; Fit-1; St2-rs1; St2; Ly84; DER4; T1; ST2L	T1/ST2; Fit-1; St2-rs1; St2; Ly84; DER4; T1; ST2L
Mus musculus	RefSeq	ILMN_223481	ILMN_223481	GGNBP2	NM_153144.2	NM_153144.2		217039	139949212	NM_153144.2	Ggnbp2	NP_694784.2	ILMN_1227938	006900685	S	2253	CAAGAGGCCCGTTTGTAGTGGCTGGCTGACAACGGCTGGAGCAAATTAAA	11	-	84646510-84646511:84646512-84646559	11qC	Mus musculus gametogenetin binding protein 2 (Ggnbp2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DIF-3; AI451896; D330017P12Rik; C75939; Zfp403	DIF-3; AI451896; D330017P12Rik; C75939; Zfp403
Mus musculus	MEEBO	ILMN_188509	ILMN_188509	A830016G23RIK	scl00320873.1_13				51769059	XM_283264	A830016G23Rik		ILMN_2697571	005720142	S	356	AATGACTGCAGAATCCCGTGCCCCAAGGAGTGATGGTAAAATCCTTCACC										
Mus musculus	MEEBO	ILMN_188509	ILMN_188509	A830016G23RIK	scl00320873.1_13				51769059	XM_283264	A830016G23Rik		ILMN_1246665	005270494	S	18	GGGTATTTAAAACCTCTGTAGAAAGGAGAAAGATAGGCCAGGGGGTAAAC										
Mus musculus	RefSeq	ILMN_212575	ILMN_212575	FOXP3	NM_054039.1	NM_054039.1		20371	16905074	NM_054039.1	Foxp3	NP_473380.1	ILMN_2635132	001570241	S	3664	CTGTGTTGGGGTGACTATTATGTGTTGGAGTGTGCCTGAACAGCTCTGCC	X	+	7172285-7172334	XqA1.1	Mus musculus forkhead box P3 (Foxp3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]; Any process that modulates the frequency, rate, or extent of immunoglobulin production [goid 2637] [evidence IMP]; Any process that modulates the frequency, rate or extent of isotype switching to IgG isotypes [goid 48302] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta1 [goid 32914] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a CD4-positive, CD25-positive, alpha-beta regulatory T cell [goid 2361] [evidence IMP]; Any process involved in the carrying out of an immune response by a T cell [goid 2456] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it [goid 2507] [evidence IDA]; Tolerance induction directed at self antigens [goid 2513] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of peripheral T cell tolerance induction [goid 2851] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell anergy [goid 2669] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction [goid 2666] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response [goid 2677] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response [goid 2677] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-2 production [goid 32703] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production [goid 32713] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production [goid 32714] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-10 production [goid 32693] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production [goid 32713] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production [goid 32714] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of isotype switching to IgE isotypes [goid 48294] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells [goid 32831] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33092] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of differentiation of regulatory T cells [goid 45591] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process by which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types [goid 45066] [evidence IDA]; The process by which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types [goid 45066] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation [goid 50672] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of differentiation of regulatory T cells [goid 45591] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation [goid 50672] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35067] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45077] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45085] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35066] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IMP]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]	sf; scurfin; JM2	sf; scurfin; JM2
Mus musculus	RefSeq	ILMN_212575	ILMN_212575	FOXP3	NM_054039.1	NM_054039.1		20371	16905074	NM_054039.1	Foxp3	NP_473380.1	ILMN_1225330	003460014	S	1349	ACCATTGGTTTACTCGCATGTTCGCCTACTTCAGAAACCACCCCGCCACC	X	+	7169822-7169871	XqA1.1	Mus musculus forkhead box P3 (Foxp3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]; Any process that modulates the frequency, rate, or extent of immunoglobulin production [goid 2637] [evidence IMP]; Any process that modulates the frequency, rate or extent of isotype switching to IgG isotypes [goid 48302] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta1 [goid 32914] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a CD4-positive, CD25-positive, alpha-beta regulatory T cell [goid 2361] [evidence IMP]; Any process involved in the carrying out of an immune response by a T cell [goid 2456] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it [goid 2507] [evidence IDA]; Tolerance induction directed at self antigens [goid 2513] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of peripheral T cell tolerance induction [goid 2851] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell anergy [goid 2669] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction [goid 2666] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response [goid 2677] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response [goid 2677] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-2 production [goid 32703] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production [goid 32713] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production [goid 32714] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-10 production [goid 32693] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production [goid 32713] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production [goid 32714] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of isotype switching to IgE isotypes [goid 48294] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells [goid 32831] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33092] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of differentiation of regulatory T cells [goid 45591] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process by which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types [goid 45066] [evidence IDA]; The process by which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types [goid 45066] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation [goid 50672] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of differentiation of regulatory T cells [goid 45591] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation [goid 50672] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35067] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45077] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45085] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35066] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IMP]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]	sf; scurfin; JM2	sf; scurfin; JM2
Mus musculus	RefSeq	ILMN_212575	ILMN_212575	FOXP3	NM_054039.1	NM_054039.1		20371	16905074	NM_054039.1	Foxp3	NP_473380.1	ILMN_2917180	006290307	S	3584	CAGTGCACATCTTGGGCAAGGTAGCTGATCAGTGATAACACTCACGTGCC	X	+	7172205-7172254	XqA1.1	Mus musculus forkhead box P3 (Foxp3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]; Any process that modulates the frequency, rate, or extent of immunoglobulin production [goid 2637] [evidence IMP]; Any process that modulates the frequency, rate or extent of isotype switching to IgG isotypes [goid 48302] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta1 [goid 32914] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a CD4-positive, CD25-positive, alpha-beta regulatory T cell [goid 2361] [evidence IMP]; Any process involved in the carrying out of an immune response by a T cell [goid 2456] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it [goid 2507] [evidence IDA]; Tolerance induction directed at self antigens [goid 2513] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of peripheral T cell tolerance induction [goid 2851] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell anergy [goid 2669] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction [goid 2666] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response [goid 2677] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response [goid 2677] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-2 production [goid 32703] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production [goid 32713] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production [goid 32714] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-10 production [goid 32693] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production [goid 32713] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production [goid 32714] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of isotype switching to IgE isotypes [goid 48294] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells [goid 32831] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33092] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of differentiation of regulatory T cells [goid 45591] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process by which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types [goid 45066] [evidence IDA]; The process by which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types [goid 45066] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation [goid 50672] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of differentiation of regulatory T cells [goid 45591] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation [goid 50672] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35067] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45077] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45085] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35066] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IMP]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]	sf; scurfin; JM2	sf; scurfin; JM2
Mus musculus	RefSeq	ILMN_213550	ILMN_212575	FOXP3	NM_054039.1	NM_054039.1		20371	16905074	NM_054039.1	Foxp3	NP_473380.1	ILMN_1251126	007210500	S	2410	TCTGATCAGGGTGATTGTCCAGCTGACCACAGTTTATTGGATGGGCACTG	X	+	7171031-7171080	XqA1.1	Mus musculus forkhead box P3 (Foxp3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IDA]; Any process that modulates the frequency, rate, or extent of immunoglobulin production [goid 2637] [evidence IMP]; Any process that modulates the frequency, rate or extent of isotype switching to IgG isotypes [goid 48302] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of production of transforming growth factor-beta1 [goid 32914] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IMP]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a CD4-positive, CD25-positive, alpha-beta regulatory T cell [goid 2361] [evidence IMP]; Any process involved in the carrying out of an immune response by a T cell [goid 2456] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IMP]; A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it [goid 2507] [evidence IDA]; Tolerance induction directed at self antigens [goid 2513] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of peripheral T cell tolerance induction [goid 2851] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell anergy [goid 2669] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell tolerance induction [goid 2666] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response [goid 2677] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response [goid 2677] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-2 production [goid 32703] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production [goid 32713] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production [goid 32714] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-10 production [goid 32693] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production [goid 32713] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production [goid 32714] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of isotype switching to IgE isotypes [goid 48294] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells [goid 32831] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33092] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of differentiation of regulatory T cells [goid 45591] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process by which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types [goid 45066] [evidence IDA]; The process by which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types [goid 45066] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation [goid 50672] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of differentiation of regulatory T cells [goid 45591] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation [goid 50672] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35067] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45077] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45085] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35066] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IMP]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]	sf; scurfin; JM2	sf; scurfin; JM2
Mus musculus	RefSeq	ILMN_214618	ILMN_214618	ETFA	NM_145615.3	NM_145615.3		110842	142351839	NM_145615.3	Etfa	NP_663590.2	ILMN_2649966	004180458	S	904	GCAGTTGGTGCTTCCCGAGCTGCTGTTGATGCTGGCTTTGTTCCCAATGA	9	-	55330116-55330162:55333077-55333079	9qB	Mus musculus electron transferring flavoprotein, alpha polypeptide (Etfa), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system [goid 17133] [evidence TAS]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence TAS]	D9Ertd394e; 2010200I21Rik	D9Ertd394e; 2010200I21Rik
Mus musculus	RefSeq	ILMN_214618	ILMN_214618	ETFA	NM_145615.3	NM_145615.3		110842	142351839	NM_145615.3	Etfa	NP_663590.2	ILMN_1237075	005960653	S	1061	TCGTGGCTATTAACAAAGATCCAGAAGCTCCAATTTTCCAGGTGGCAGAT	9	-	55309453-55309502	9qB	Mus musculus electron transferring flavoprotein, alpha polypeptide (Etfa), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system [goid 17133] [evidence TAS]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence TAS]	D9Ertd394e; 2010200I21Rik	D9Ertd394e; 2010200I21Rik
Mus musculus	RefSeq	ILMN_191223	ILMN_317290	LOC100045240	XM_001473915.1	XM_001473915.1		100045240	149252936	XM_001473915.1	LOC100045240	XP_001473965.1	ILMN_2477213	004880653	S	1610	TTTTGATCTCTGAGGTTGTTTGTCCCAGTCAGTGGAAATGGTGTCAGGCA					PREDICTED: Mus musculus hypothetical protein LOC100045240 (LOC100045240), mRNA.					
Mus musculus	RefSeq	ILMN_219296	ILMN_219296	OPN1MW	NM_008106.2	NM_008106.2		14539	87299640	NM_008106.2	Opn1mw	NP_032132.1	ILMN_2706948	004390221	S	1140	CCCATCCATCAAAGCTTTGGCCATGTTTTACCTCCCTTCTCATCTATCCT	X	+	71383858-71383907	XqA7.3	Mus musculus opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan) (Opn1mw), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gcp	Gcp
Mus musculus	RefSeq	ILMN_222202	ILMN_222202	1700018F24RIK	NM_027069.1	NM_027069.1		69396	13386195	NM_027069.1	1700018F24Rik	NP_081345.1	ILMN_2746218	006290243	S	910	CTGCCAGGCAGTTATTTCTATCTTACACAGTGCAGTTAGGAACACCAGAT	5	+	145298996-145299045	5qG2	Mus musculus RIKEN cDNA 1700018F24 gene (1700018F24Rik), mRNA.				AV045857	AV045857
Mus musculus	Riken	ILMN_203807	ILMN_203807	A330039C13RIK	ri|A330039C13|PX00131O22|AK039399|3604					AK039399	A330039C13Rik		ILMN_1217367	002190520	S	3254	GTAGGCTGGCAAAACCTCCAAACCTTGAGTGATTTGTGTGTGAGGCCAGA										
Mus musculus	RefSeq	ILMN_215931	ILMN_215931	GALK2	NM_175154.2	NM_175154.2		69976	31341000	NM_175154.2	Galk2	NP_780363.1	ILMN_2665352	005260592	S	2305	GTGAACCGACAGTGATGAAGTAAGGGCACAAGGCTCTGGTCACGTGGTGA	2	+	125809819-125809868	2qF1	Mus musculus galactokinase 2 (Galk2), mRNA. XM_990182 XM_990216 XM_990246 XM_990277 XM_990306	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence IEA]; The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y [goid 46835] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-galactose = ADP + D-galactose 1-phosphate [goid 4335] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + N-acetyl-D-galactosamine = ADP + N-acetyl-alpha-D-galactosamine 1-phosphate [goid 33858] [evidence IEA]	2810017M24Rik; AI327030; Gk2	2810017M24Rik; AI327030; Gk2
Mus musculus	RefSeq	ILMN_198550	ILMN_198550	LOC236750	XM_111879.3	XM_111879.3			38086114	XM_111879.3	LOC236750		ILMN_1255349	005670768	S	4441	GGACAGTCAGATTTACCAAGGGTGGCCCATCTCAAGAGCAGCATGTGGCC										
Mus musculus	RefSeq	ILMN_193921	ILMN_260995	ALG13	NM_026247.1	NM_026247.1		67574	13385753	NM_026247.1	Alg13	NP_080523.1	ILMN_1242687	005700370	S	1463	GGATATAGCTCACTATAGGATCCATGGCTATATTCACATGAGTACATGGA	X	+	140759618-140759667	XqF2	Mus musculus asparagine-linked glycosylation 13 homolog (S. cerevisiae) (Alg13), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Covalent attachment of a glycosyl residue to a lipid molecule [goid 30259] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-D-glucosaminyl-diphosphodolichol = UDP + N,N''-diacetylchitobiosyldiphosphodolichol [goid 4577] [evidence IEA]	4833435D08Rik; 2810046O15Rik; Glt28d1; MDS031	4833435D08Rik; 2810046O15Rik; Glt28d1; MDS031
Mus musculus	Riken	ILMN_206689	ILMN_206689	1110070O15RIK	ri|1110070O15|ZA00008E02|AK075684|303					AK075684	1110070O15Rik		ILMN_2581972	006280725	S	63	GTCTATGTATGGTTTGCTGTTAGTCGGTGGCTTTGGGCATCTGCTGGGGA										
Mus musculus	RefSeq	ILMN_196524	ILMN_321570	1190028D05RIK	XM_001474289.1	XM_001474289.1		330767	149258753	XM_001474289.1	1190028D05Rik	XP_001474339.1	ILMN_1230347	000070687	S	481	GGGAGAGATCCCTGAATCTCAGGTGAGGAGAGTGTGTTATGGATGCACCC	8	+	53488411-53488460	8qB1.3	PREDICTED: Mus musculus RIKEN cDNA 1190028D05 gene (1190028D05Rik), mRNA.					
Mus musculus	MEEBO	ILMN_191741	ILMN_191741	4930425H11RIK	scl073860.2_111						4930425H11Rik		ILMN_2481763	005720315	S	11	GAACCCACACGACACTCAGGAGGAGGTACAATAAGACTTTGTGATGCCAA										
Mus musculus	RefSeq	ILMN_217690	ILMN_217690	PSME4	NM_134013.3	NM_134013.3		103554	117956380	NM_134013.3	Psme4	NP_598774.2	ILMN_2947187	002140300	S	6172	GGGCCATGGGTCATGAATCTGAAGTTTTGACCGCCTTGTGTCTAGAGAGC	11	+	30780091-30780140	11qA4	Mus musculus proteasome (prosome, macropain) activator subunit 4 (Psme4), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		AA409398; TEMO; AU041366; KIAA0077; mKIAA0077	AA409398; TEMO; AU041366; KIAA0077; mKIAA0077
Mus musculus	RefSeq	ILMN_217690	ILMN_217690	PSME4	NM_134013.3	NM_134013.3		103554	117956380	NM_134013.3	Psme4	NP_598774.2	ILMN_1230087	007160162	S	2657	GTACACAGCTGCTTGATTGGTTCAGGGAACCTTCTACCTCCATTGAAAGG	11	+	30723087-30723136	11qA4	Mus musculus proteasome (prosome, macropain) activator subunit 4 (Psme4), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		AA409398; TEMO; AU041366; KIAA0077; mKIAA0077	AA409398; TEMO; AU041366; KIAA0077; mKIAA0077
Mus musculus	RefSeq	ILMN_191679	ILMN_239044	MSRB3	NM_177092.3	NM_177092.3		320183	66793434	NM_177092.3	Msrb3	NP_796066.1	ILMN_1249215	001660553	S	358	GCCTGCCTTCCATGATGTGATCAGTTCGGAGGCCATCGAGTTCACAGATG	10	-	120228481-120228530	10qD2	Mus musculus methionine sulfoxide reductase B3 (Msrb3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues [goid 30091] [evidence ISS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin [goid 8113] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence ISS]; Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on oxidized methionine in peptide linkage with specificity for the R enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 318] [evidence ISS]	MsrB2; I-8-23; D430026P16Rik	MsrB2; I-8-23; D430026P16Rik
Mus musculus	RefSeq	ILMN_198658	ILMN_198658	LOC331507	XM_284733.2	XM_284733.2			38086714	XM_284733.2	LOC331507		ILMN_1226402	003290300	S	391	GCCTATTATGGCAATGACTCTGACTTCGAGGTGGTGTACCAGCAATGCCT										
Mus musculus	RefSeq	ILMN_184189	ILMN_322779	LOC100047043	XM_001477270.1	XM_001477270.1		100047043	149249465	XM_001477270.1	LOC100047043	XP_001477320.1	ILMN_1215995	005260112	S	96	TGTACTTATGTAATTATACTCCTGTAAAAGCTAAAATAGAACCTCTCTAA					PREDICTED: Mus musculus similar to enolase 1, alpha non-neuron (LOC100047043), mRNA.					
Mus musculus	RefSeq	ILMN_211307	ILMN_211307	FAH	NM_010176.2	NM_010176.2		14085	144227239	NM_010176.2	Fah	NP_034306.1	ILMN_2614494	005860348	S	1295	CGGAAGTCACAAGACACACCCTTGCCTTATGAGGATCATGCTACCACTGC	7	-	91733719-91733768	7qD3	Mus musculus fumarylacetoacetate hydrolase (Fah), mRNA.		The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6527] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6572] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate [goid 4334] [evidence IMP]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216375	ILMN_216375	CAR5B	NM_181315.3	NM_181315.3		56078	144227235	NM_181315.3	Car5b	NP_851832.1	ILMN_2674140	007200528	S	795	GGTCTCTCACTACGCCGCCCCTCTCAGAGTCTGTCACCTGGATCATTAAG	X	-	160425059-160425108	XqF5	Mus musculus carbonic anhydrase 5b, mitochondrial (Car5b), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IDA]	CAVB; 7330410H16Rik; D730005F19Rik; CarVb	CAVB; 7330410H16Rik; D730005F19Rik; CarVb
Mus musculus	RefSeq	ILMN_216375	ILMN_216375	CAR5B	NM_181315.3	NM_181315.3		56078	144227235	NM_181315.3	Car5b	NP_851832.1	ILMN_2670368	003870707	S	765	CTACTTGCCCAGATTACTGGACCTACTCTGGGTCTCTCACTACGCCGCCC	X	-	160425089-160425138	XqF5	Mus musculus carbonic anhydrase 5b, mitochondrial (Car5b), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IDA]	CAVB; 7330410H16Rik; D730005F19Rik; CarVb	CAVB; 7330410H16Rik; D730005F19Rik; CarVb
Mus musculus	RefSeq	ILMN_196486	ILMN_196486	PSMA8	XM_357002.5	XM_357002.5		73677	149269664	XM_357002.5	Psma8	XP_357002.2	ILMN_1234190	005860097	S	307	GATGGCATCCCAAGATTGTATCAGACAGATCCCTCCGGGACTTACCACGC	18	+	14889554-14889603	18qA1	PREDICTED: Mus musculus proteasome (prosome, macropain) subunit, alpha type, 8, transcript variant 1 (Psma8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]		
Mus musculus	Riken	ILMN_203202	ILMN_203202	GRID2	ri|B230104L07|PX00068M09|AK045348|2334					AK045348	Grid2		ILMN_1250784	004640475	S	1842	GTCTGCTAGCTCCCTGAACTTTGCCATCCAGCACTGAGAACTTTCCATTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]		
Mus musculus	RefSeq	ILMN_231310	ILMN_231310	DUSP4	NM_176933.3	NM_176933.3		319520	31581570	NM_176933.3	Dusp4	NP_795907.1	ILMN_2870965	003610487	S	2094	CTCCAGCGGTCTGTTTGGCTGGGGATAGAGTGGTTTCTTCCCACTTGGCC	8	+	36288078-36288127	8qA4	Mus musculus dual specificity phosphatase 4 (Dusp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	AI844617; E130306H24Rik; BB104621; 2700078F24Rik	AI844617; E130306H24Rik; BB104621; 2700078F24Rik
Mus musculus	RefSeq	ILMN_222761	ILMN_222761	LTF	NM_008522.2	NM_008522.2		17002	31560676	NM_008522.2	Ltf	NP_032548.2	ILMN_2889020	000240474	S	2661	GCACACACGTGTGAAAGCCAGAGGACAATCTGGAATGTCACCATCCACCT	9	+	110887501-110887550	9qF3	Mus musculus lactotransferrin (Ltf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]	N lobe; Lf; MMS10-R; Ms10r	N lobe; Lf; MMS10-R; Ms10r
Mus musculus	RefSeq	ILMN_187430	ILMN_225324	TRADD	NM_001033161.2	NM_001033161.2		71609	121949761	NM_001033161.2	Tradd	NP_001028333.1	ILMN_2505100	005720332	S	99	GGAGTCTGCGGTAGACAAGGTGATCCTGTCTGAAGCCTACACGGATCCCA	8	-	107784466-107784515	8qD3	Mus musculus TNFRSF1A-associated via death domain (Tradd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of hair follicle development [goid 51798] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AA930854; 9130005N23Rik	AA930854; 9130005N23Rik
Mus musculus	RefSeq	ILMN_216562	ILMN_216562	CCDC120	NM_207202.2	NM_207202.2		54648	61742830	NM_207202.2	Ccdc120	NP_997085.2	ILMN_2672543	007330504	S	3402	GGTGACATCTGGCCATGGGTTGCAGGCCACATCATGTCCTCCTTGGCATT	X	-	7309029-7309078	XqA1.1	Mus musculus coiled-coil domain containing 120 (Ccdc120), mRNA.				MGC56838; DXImx50e; Sfc25; Jm11; AA030924	MGC56838; DXImx50e; Sfc25; Jm11; AA030924
Mus musculus	MEEBO	ILMN_193747	ILMN_193747	D10BWG1379E	scl38161.23_462				51765467	XM_125524	D10Bwg1379e		ILMN_1220064	003850709	S	6	GGGAGACCTTTCTTTAAAGCTGGTAACACTGGATGCCACCGAGCAGGGCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193747	ILMN_193747	D10BWG1379E	scl38161.23_462				51765467	XM_125524	D10Bwg1379e		ILMN_2525402	005670377	S	6509	ACTCCCCACTGCTTCAGCGGCCACAGCATCTCATAGACCAAGGGCAGATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]		
Mus musculus	MEEBO	ILMN_221385	ILMN_221385	SEC10L1	scl0105504.1_330	NM_207214.1			46402176	NM_207214.1	Sec10l1		ILMN_2734889	002510278	S	2525	TATAAACCTACATGACTGTTATAATCCTGGAAAATGTTGGTGTCAGAAAA										
Mus musculus	RefSeq	ILMN_215369	ILMN_311349	LOC100044582	XR_030804.1	XR_030804.1		100044582	149269908	XR_030804.1	LOC100044582		ILMN_2658660	004640086	S	2193	GTGGCTCCCACAGAACTGCGAGGCTCATACAATATGCTCTATACAAAAGA					PREDICTED: Mus musculus similar to desmoglein 3 (LOC100044582), misc RNA.					
Mus musculus	RefSeq	ILMN_222297	ILMN_324551	CEP170	NM_001099637.1	NM_001099637.1		545389	153791367	NM_001099637.1	Cep170	NP_001093107.1	ILMN_1240566	000620669	S	4655	GGATTTCCCAATGCTATCCTGCCATCTCCACCAAAACAGAAGTCCAGCCC				1qH4	Mus musculus centrosomal protein 170 (Cep170), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			AI195353; 4933426L22Rik; A330004A13Rik	AI195353; 4933426L22Rik; A330004A13Rik
Mus musculus	RefSeq	ILMN_185163	ILMN_324551	CEP170	NM_001099637.1	NM_001099637.1		545389	153791367	NM_001099637.1	Cep170	NP_001093107.1	ILMN_2424703	003610438	S	6658	ATTGTTCCCCCCTTTAGTTAACGTTTGGTACTGAGTCTATCTACATGAAG				1qH4	Mus musculus centrosomal protein 170 (Cep170), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			AI195353; 4933426L22Rik; A330004A13Rik	AI195353; 4933426L22Rik; A330004A13Rik
Mus musculus	RefSeq	ILMN_220830	ILMN_220830	PAF1	NM_019458.3	NM_019458.3		54624	133891702	NM_019458.3	Paf1	NP_062331.2	ILMN_2744968	003420180	S	701	CACAGAGGAAGAAATATACAAAGACAGGGACAGCCAAATCACAGCCATTG	7	+	29176011-29176060	7qA3	Mus musculus Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) (Paf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		FLJ11123; 5730511K23Rik; MGC102062; AA675045	FLJ11123; 5730511K23Rik; MGC102062; AA675045
Mus musculus	RefSeq	ILMN_215476	ILMN_215476	RHOU	NM_133955.3	NM_133955.3		69581	146149256	NM_133955.3	Rhou	NP_598716.1	ILMN_1237773	000430181	S	2936	GAATTCTAAACGCATGTGCCTGGGTGGGACGTCAAGTCAGGGTTCTCATC				8qE2	Mus musculus ras homolog gene family, member U (Rhou), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Arhu; AI182090; G28K; WRCH1; WRCH-1; CDC42L1; mG28K; 2310026M05Rik	Arhu; AI182090; G28K; WRCH1; WRCH-1; CDC42L1; mG28K; 2310026M05Rik
Mus musculus	MEEBO	ILMN_194382	ILMN_194382	A930005G04RIK	scl39513.1.1_263						A930005G04Rik		ILMN_1235921	000160040	S	8	CCACCACACTTGAATTTGTACCACGGGAGCGGCTTATACGTGACTGTCCC										
Mus musculus	MEEBO	ILMN_187168	ILMN_187168	F630025I20RIK	scl0104757.2_50						F630025I20Rik		ILMN_2441749	004120286	S	17	CCTCTCTTTCCAAAATGGTTGTCATGGCTTGGTCAGCTGTGCGACATAGG										
Mus musculus	MEEBO	ILMN_216330	ILMN_216330	B230333C21RIK	scl54341.4.1_13	XM_111900.3			38086106	XM_111900.3	B230333C21Rik		ILMN_2716719	005050523	S	5798	TTAAAGAGGGGTTTCCGTGCGCTTCCCTTGTATGTGCTGCTAATCCTGTA										
Mus musculus	Riken	ILMN_201839	ILMN_201839	5730510P18RIK	ri|5730510P18|PX00005G16|AK017761|852					AK017761	5730510P18Rik		ILMN_2544995	004210674	S	747	TTAGAAGGGACATGAAGTTAGGAAGGAGACATGTGGCCGAGAGTAGGGAG										
Mus musculus	RefSeq	ILMN_188500	ILMN_188500	TOP2B	NM_009409.2	NM_009409.2		21974	34328147	NM_009409.2	Top2b	NP_033435.2	ILMN_1243403	005860021	S	5512	GTCTGATTGGCTTGTAGAATTGTTATAGATTACCGTGCATTAGCACAGAT	14	+	17263180-17263229	14qA2	Mus musculus topoisomerase (DNA) II beta (Top2b), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transient cleavage and passage of individual DNA strands or double helices through one another, resulting a topological transformation in double-stranded DNA [goid 3916] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IEA]	D230016L12Rik; Top-2	D230016L12Rik; Top-2
Mus musculus	RefSeq	ILMN_217529	ILMN_242623	OLFR508	NM_146773.1	NM_146773.1		258769	22129304	NM_146773.1	Olfr508	NP_666984.1	ILMN_1250519	001110037	S	872	GCCTCAGAAACAAGGATGTTAAAGAGGCCATGAAAAAATTGATGGCTAAC	7	+	115774379-115774428	7qE3	Mus musculus olfactory receptor 508 (Olfr508), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-6	MOR204-6
Mus musculus	RefSeq	ILMN_189983	ILMN_189983	ZDHHC13	NM_028031.1	NM_028031.1		243983	27229144	NM_028031.1	Zdhhc13	NP_082307.1	ILMN_1215722	005560079	S	4	GGCTCCCACGTTCCAGGATTTGGGCGACACGGCATCTGTGTACATGAAAA	7	+	48657027-48657076	7qB4	Mus musculus zinc finger, DHHC domain containing 13 (Zdhhc13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Hip14l; C530010M18; HIP3RP; 2410004E01Rik	Hip14l; C530010M18; HIP3RP; 2410004E01Rik
Mus musculus	RefSeq	ILMN_189983	ILMN_189983	ZDHHC13	NM_028031.1	NM_028031.1		243983	27229144	NM_028031.1	Zdhhc13	NP_082307.1	ILMN_2806188	007200296	S	1922	CCCAGTACACCATGGTTTTCCACCCAGCCAAAGAGAAAGTCCTTCGCTCT	7	+	48694973-48695022	7qB4	Mus musculus zinc finger, DHHC domain containing 13 (Zdhhc13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Hip14l; C530010M18; HIP3RP; 2410004E01Rik	Hip14l; C530010M18; HIP3RP; 2410004E01Rik
Mus musculus	RefSeq	ILMN_188012	ILMN_225621	AGL	NM_001081326.1	NM_001081326.1		77559	124486746	NM_001081326.1	Agl	NP_001074795.1	ILMN_2449088	006760603	S	59	CCCCGGGCCGCCGCTGCGTCCGGCGTTCCCGCTGTACCCGGCTCCGGCTC	3	-	116510976-116511025	3qG1	Mus musculus amylo-1,6-glucosidase, 4-alpha-glucanotransferase (Agl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Intracellular foci at which aggregated proteins have been sequestered [goid 16234] [evidence IDA]	The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IDA]	Catalysis of the cleavage of branch points in branched glycogen polymers [goid 4133] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any polysaccharide [goid 30247] [evidence IDA]; Interacting selectively with any polysaccharide [goid 30247] [evidence IMP]; Interacting selectively and non-covalently with a polymer of ubiqutin [goid 31593] [evidence IDA]; Interacting selectively and non-covalently with a polymer of ubiqutin [goid 31593] [evidence IMP]	1110061O17Rik; 9630046L06Rik; 9430004C13Rik; AI850929; C77197	1110061O17Rik; 9630046L06Rik; 9430004C13Rik; AI850929; C77197
Mus musculus	RefSeq	ILMN_205453	ILMN_225621	AGL	NM_001081326.1	NM_001081326.1		77559	124486746	NM_001081326.1	Agl	NP_001074795.1	ILMN_1257445	006770196	S	6255	AGAGCACTTAGGCAGAGCGCTTCATTCCCGTGTGATGCTGCATACCGTTG	3	-	116446237-116446286	3qG1	Mus musculus amylo-1,6-glucosidase, 4-alpha-glucanotransferase (Agl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Intracellular foci at which aggregated proteins have been sequestered [goid 16234] [evidence IDA]	The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IDA]	Catalysis of the cleavage of branch points in branched glycogen polymers [goid 4133] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any polysaccharide [goid 30247] [evidence IDA]; Interacting selectively with any polysaccharide [goid 30247] [evidence IMP]; Interacting selectively and non-covalently with a polymer of ubiqutin [goid 31593] [evidence IDA]; Interacting selectively and non-covalently with a polymer of ubiqutin [goid 31593] [evidence IMP]	1110061O17Rik; 9630046L06Rik; 9430004C13Rik; AI850929; C77197	1110061O17Rik; 9630046L06Rik; 9430004C13Rik; AI850929; C77197
Mus musculus	Riken	ILMN_206154	ILMN_206154	D030014E15RIK	ri|D030014E15|PX00178D08|AK083437|1858					AK083437	D030014E15Rik		ILMN_1220782	002230139	S	1382	TACAGTTGAACCACCAATGAGGAATGGGTCAGTTTACCAGTTGTCAGGCC										
Mus musculus	Riken	ILMN_201730	ILMN_201730	2010005E20RIK	ri|2010005E20|ZX00043H04|AK008118|966					AK008118	2010005E20Rik		ILMN_2544126	004250528	S	786	CAGGATTGACTATTGCAGCCCCACAGTGCCCACGCTCAAGGAGAGCAGTC										
Mus musculus	RefSeq	ILMN_221599	ILMN_221599	TMEM132D	NM_172885.2	NM_172885.2		243274	142373150	NM_172885.2	Tmem132d	NP_766473.1	ILMN_1245312	003940592	S	4006	AACGGGGACACCAATGTTGTTCTTACCTTTCAGCCTTTAACCCACTTGGG	5	-	128264083-128264131:128264132-128264132	5qG1.2-qG1.3	Mus musculus transmembrane protein 132D (Tmem132d), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			C630028F04Rik	C630028F04Rik
Mus musculus	RefSeq	ILMN_203455	ILMN_240385	1200003I07RIK	NM_001039965.1	NM_001039965.1		66869	90577168	NM_001039965.1	1200003I07Rik	NP_001035054.1	ILMN_2557436	001980471	S	111	AGGCGAGCTCAGCAACCGCGCCATGGTCTGCCAGGAACTTTCAGGGAGGA	8	-	72234858-72234883:72240667-72240690	8qB3.3	Mus musculus RIKEN cDNA 1200003I07 gene (1200003I07Rik), transcript variant 2, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211417	ILMN_211417	PSIP1	NM_133948.2	NM_133948.2		101739	31981617	NM_133948.2	Psip1	NP_598709.1	ILMN_2796429	002230528	S	2823	TGTCCCGTCTAGGGAGGACATGTCACAGGTGTTCTGAGCGATCAGGCCAG	4	-	82927220-82927269	4qC3	Mus musculus PC4 and SFRS1 interacting protein 1 (Psip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AU015605; Psip2; AA408851; Ledgfa; Ledgfb	AU015605; Psip2; AA408851; Ledgfa; Ledgfb
Mus musculus	Riken	ILMN_205062	ILMN_205062	FAP	ri|D230024E06|PX00188L07|AK051959|2345					AK051959	Fap		ILMN_1235181	005550632	S	1718	CTCATTCGGGTAATTGTGTGGGTGCGAGTGTGCTCACACACATGCCTGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISO]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199630	ILMN_199630	LOC383775	XM_357238.1	XM_357238.1			38075348	XM_357238.1	LOC383775		ILMN_1258298	005910370	S	345	TCCGACCCTGCTTGTAGCTGACCCGAATCCAAAAAGTGTGGAGGTCCTGG										
Mus musculus	RefSeq	ILMN_218259	ILMN_218259	DVL1	NM_010091.3	NM_010091.3		13542	47933343	NM_010091.3	Dvl1	NP_034221.3	ILMN_1215208	006560427	S	1099	ACCACTTCCTGGGCATCAGCATCGTGGGCCAGAGCAACGACCGGGGTGAT	4	+	155229001-155229050	4qE2	Mus musculus dishevelled, dsh homolog 1 (Drosophila) (Dvl1), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence ISA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence TAS]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process that modulates levels of neurotransmitter [goid 1505] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IGI]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Dvl; mKIAA4029; KIAA4029	Dvl; mKIAA4029; KIAA4029
Mus musculus	RefSeq	ILMN_215215	ILMN_215215	TMEM97	NM_133706.2	NM_133706.2		69071	118130934	NM_133706.2	Tmem97	NP_598467.1	ILMN_2656871	003400270	S	1045	GCCTCCATTTCTATCTTGAACAGATAGCCTGCTCTGGGTTATTCTGGTGC	11	-	78355557-78355606	11qB5	Mus musculus transmembrane protein 97 (Tmem97), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1810014L12Rik; D11Bhm182e; RP23-399H5.9; AI115531; AL022956; MGC102369	1810014L12Rik; D11Bhm182e; RP23-399H5.9; AI115531; AL022956; MGC102369
Mus musculus	Riken	ILMN_206790	ILMN_206790	SRR	ri|B230334I23|PX00316P06|AK080830|1280					AK080830	Srr		ILMN_1258982	001240653	S	1113	GAGTTCAGTTCTGAGGTCAGCCTGGTCTACAGTGAGTTCCAGGACAGCCA							The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine [goid 9069] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the synthesis of free D-serine from L-serine [goid 30378] [evidence IDA]; Catalysis of the reaction: L-threonine = D-threonine [goid 18114] [evidence IDA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198918	ILMN_198918	LOC330907	XM_284486.2	XM_284486.2			38089749	XM_284486.2	LOC330907		ILMN_1236570	005960463	S	677	GAGGATGGTAACTCTATCAAGCAAACCAGAGCGAGGTCATAAAGCTGGGG										
Mus musculus	Riken	ILMN_206304	ILMN_206304	ASK-PENDING	ri|D030059D21|PX00181D03|AK083650|1919					AK083650	Ask-pending		ILMN_2579122	006590743	S	1018	GGATGATGGCCTAGACTAAGCAGGAATAGGAGTTCTTTGGGCATGGTCAG										
Mus musculus	MEEBO	ILMN_188280	ILMN_188280	4930412L05RIK	scl073941.3_14				51709199	XM_489045	4930412L05Rik		ILMN_2451328	004900221	S	7	GCCAGGGAGAAATACAGATAACACCTTAAAGGACATGCTGAATCTAGCAC										
Mus musculus	MEEBO	ILMN_188280	ILMN_188280	4930412L05RIK	scl073941.3_14				51709199	XM_489045	4930412L05Rik		ILMN_1217416	002710370	S	414	CCTACCTACCGACCGACCTGTGGTCTCTGAAGTTGGACAATGCTCCCCAA										
Mus musculus	MEEBO	ILMN_186718	ILMN_186718	DM15	scl33011.16_16				14192944	NM_032418	Dm15		ILMN_1237061	004290066	S	13	GAGACTCGACATTCCTCGGTATTTATTGTCTGTCCCCACCTACGACCTCC										
Mus musculus	RefSeq	ILMN_224437	ILMN_224437	2310035C23RIK	NM_173187.1	NM_173187.1		227446	27819658	NM_173187.1	2310035C23Rik	NP_775279.1	ILMN_2950683	004570482	S	3796	CCAGTTGGCAACATCAGGTGCCATGCTGGCCAATGTGTTTCAGAGAAAGA	1	+	107581120-107581169	1qE2.1	Mus musculus RIKEN cDNA 2310035C23 gene (2310035C23Rik), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	6430401N10; mKIAA1468	6430401N10; mKIAA1468
Mus musculus	Riken	ILMN_206636	ILMN_206636	2810021O14RIK	ri|4930412E13|PX00313L16|AK076679|727					AK076679	2810021O14Rik		ILMN_1248235	004880639	S	539	GGTGAAGATCACTGGCTCCTCTTGCGGAGGACCTGCATTCCATTCCTAGC										
Mus musculus	RefSeq	ILMN_221850	ILMN_221850	OLFR66	NM_013618.2	NM_013618.2		18367	22165352	NM_013618.2	Olfr66	NP_038646.1	ILMN_1223084	003390646	S	4364	GGACTTGAATCCTTATTATAGACTCTCAAGTTCTCTATTATTTCTGGCCC	7	-	103755099-103755126:103755127-103755148	7qE3	Mus musculus olfactory receptor 66 (Olfr66), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	5'beta1; MOR1-3; ORL532; 5'[b]1	5'beta1; MOR1-3; ORL532; 5'[b]1
Mus musculus	RefSeq	ILMN_244456	ILMN_244456	KPNA2	NM_010655.3	NM_010655.3		16647	83281453	NM_010655.3	Kpna2	NP_034785.1	ILMN_2878355	007210291	S	481	TCAAGCTGCTCGGAAATTGCTTTCTAGAGAGAAACAGCCTCCTATAGACA	11	-	106853402-106853440:106853917-106853927	11qE1	Mus musculus karyopherin (importin) alpha 2 (Kpna2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]	IPOA1; Rch1; 2410044B12Rik; MGC91246	IPOA1; Rch1; 2410044B12Rik; MGC91246
Mus musculus	MEEBO	ILMN_194881	ILMN_194881	LFNG	scl27048.8_110				31982418	NM_008494	Lfng		ILMN_1247209	001300563	S	2	GCTGTGCCCAGTCCTAGGGAAGCTGATTTGGGTAGTAAAGGCCTGGACCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process by which embryonic segments are divided into compartments that will result in differences in cell differentiation [goid 7386] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; Progression through the nuclear division phase of a meiotic cell cycle in the female germline [goid 7143] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: transfers a beta-D-GlcNAc residue from UDP-D-GlcNAc to the fucose residue of a fucosylated protein acceptor [goid 33829] [evidence IEA]		
Mus musculus	RefSeq	ILMN_207538	ILMN_207538	B230307C21	XM_359259.1	XM_359259.1			38090831	XM_359259.1	B230307C21		ILMN_1260492	006040671	I	3325	GGGGTATGGGATGGAAGCACAAAGCACTTCATGTTCTTGATACTGCTGAG										
Mus musculus	RefSeq	ILMN_214081	ILMN_214081	FRAG1	NM_145583.2	NM_145583.2		233575	118130185	NM_145583.2	Frag1	NP_663558.1	ILMN_2751492	007610411	S	506	GCGTCTCCATGTCCGGGTTACCGCCTTCTCTGCCGCATTAACTTCAGTCT	7	+	109384749-109384798	7qE3	Mus musculus FGF receptor activating protein 1 (Frag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IMP]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A cascade of processes induced by the detection of DNA damage within a cell [goid 42770] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C76649; 1810006G21Rik	C76649; 1810006G21Rik
Mus musculus	RefSeq	ILMN_214081	ILMN_214081	FRAG1	NM_145583.2	NM_145583.2		233575	118130185	NM_145583.2	Frag1	NP_663558.1	ILMN_2665054	004850504	S	999	ATCTCCACGTTCTCTCTGGGCCCTGGGAGAGAAGAGCGGGAAGGGTATGA	7	+	109386092-109386141	7qE3	Mus musculus FGF receptor activating protein 1 (Frag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IMP]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A cascade of processes induced by the detection of DNA damage within a cell [goid 42770] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C76649; 1810006G21Rik	C76649; 1810006G21Rik
Mus musculus	RefSeq	ILMN_214081	ILMN_214081	FRAG1	NM_145583.2	NM_145583.2		233575	118130185	NM_145583.2	Frag1	NP_663558.1	ILMN_1235347	006420671	S	793	CCGGCACAACATGTATTGTGAGGCTGGAGTGTATACCATCTTTGCCATCC	7	+	109385716-109385744:109385915-109385935	7qE3	Mus musculus FGF receptor activating protein 1 (Frag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IMP]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A cascade of processes induced by the detection of DNA damage within a cell [goid 42770] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	C76649; 1810006G21Rik	C76649; 1810006G21Rik
Mus musculus	RefSeq	ILMN_210031	ILMN_210031	BPNT1	NM_011794.3	NM_011794.3		23827	118130043	NM_011794.3	Bpnt1	NP_035924.2	ILMN_3070466	000130390	I	2048	TTATGGGGGAAAGTTTCTCTAAAATACATAGTCCTATCTTTTCATATTAT	1	+	187181514-187181563	1qH5	Mus musculus bisphosphate 3'-nucleotidase 1 (Bpnt1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate [goid 8441] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]	BPntase	BPntase
Mus musculus	RefSeq	ILMN_210031	ILMN_210031	BPNT1	NM_011794.3	NM_011794.3		23827	118130043	NM_011794.3	Bpnt1	NP_035924.2	ILMN_2601507	006840164	S	693	CCACCAGATCCCATAGCAACCAGCTGGTCACAGACTGCATTTCCGCCATG	1	+	187176167-187176216	1qH5	Mus musculus bisphosphate 3'-nucleotidase 1 (Bpnt1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate [goid 8441] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]	BPntase	BPntase
Mus musculus	RefSeq	ILMN_210031	ILMN_210031	BPNT1	NM_011794.3	NM_011794.3		23827	118130043	NM_011794.3	Bpnt1	NP_035924.2	ILMN_3149112	005700411	A	1790	TAGTGCAGGGATTAAGGGCTTGCCCCACCACACCTGGCTCAAATGTTACT	1	+	187181256-187181305	1qH5	Mus musculus bisphosphate 3'-nucleotidase 1 (Bpnt1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate [goid 8441] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]	BPntase	BPntase
Mus musculus	RefSeq	ILMN_215772	ILMN_215772	ADAMTSL3	XM_194370.6	XM_194370.6		269959	94380776	XM_194370.6	Adamtsl3	XP_194370.6	ILMN_2663428	006590102	S	7047	CCCCAAATAAGTGGTCCTGTTTCTTTACTCGGTGTCCCGGCTGCTTGCAC	7	+	89762274-89762323	7qD3	PREDICTED: Mus musculus ADAMTS-like 3 (Adamtsl3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_214194	ILMN_214194	4932415M13RIK	NM_177599.3	NM_177599.3		211496	142376574	NM_177599.3	4932415M13Rik	NP_808267.1	ILMN_2706221	003840148	S	2889	ATCTTTAACGAATAAGTTCTTAATTTTGTACTTTAGAAATAATCAAGTAT	17	+	53872994-53873043	17qC	Mus musculus RIKEN cDNA 4932415M13 gene (4932415M13Rik), transcript variant 2, mRNA.			Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC130367	MGC130367
Mus musculus	RefSeq	ILMN_222744	ILMN_222744	TGTP	NM_011579.2	NM_011579.2		21822	31543860	NM_011579.2	Tgtp	NP_035709.2	ILMN_2754158	003890121	S	2390	ACCCCTGACTCAGTATAGAAAACACTCACTGCCCAAAGTTCGGTCAGACT	11	-	48799202-48799251	11qB1.2	Mus musculus T-cell specific GTPase (Tgtp), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IDA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]	Mg21; Gtp2	Mg21; Gtp2
Mus musculus	RefSeq	ILMN_197542	ILMN_197542	LOC381443	XM_355399.1	XM_355399.1			38076499	XM_355399.1	LOC381443		ILMN_1222688	007320300	S	394	GGTGCTACCAGCAAAAATCTTCCAGCTGTACAAACCGTAGCCCCAATGCC										
Mus musculus	RefSeq	ILMN_209081	ILMN_209081	CORO2B	NM_175484.1	NM_175484.1		235431	28202046	NM_175484.1	Coro2b	NP_780693.1	ILMN_2902228	006480494	S	3287	GGTCACCGGCTGGGATCTGCTATACATAGGACACTTCTTGCCTGCCCACC	9	-	62217771-62217820	9qB	Mus musculus coronin, actin binding protein, 2B (Coro2b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	E130012P22Rik; CLIPINC	E130012P22Rik; CLIPINC
Mus musculus	RefSeq	ILMN_209318	ILMN_209318	B2M	NM_009735.3	NM_009735.3		12010	144227219	NM_009735.3	B2m	NP_033865.2	ILMN_2670561	002650220	S	535	CTTACTTTAAATATTTTATGCATGTTTTCAAAAAATTGGAAATATCCTAG	2	+	121978495-121978544	2qE5	Mus musculus beta-2 microglobulin (B2m), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class Ib molecule. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family [goid 2481] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [evidence IMP]; A defense response that is mediated by cells [goid 6968] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ly-m11; beta2-m	Ly-m11; beta2-m
Mus musculus	RefSeq	ILMN_219331	ILMN_219331	GPRASP1	NM_026081.5	NM_026081.5		67298	53729356	NM_026081.5	Gprasp1	NP_080357.4	ILMN_3064494	007510086	I	797	AGACCAGAAGCTTGAGAAAAGAGGAACAGGAAAATGGCGTGGATTTCTGG	X	+	132331525-132331574	XqF1	Mus musculus G protein-coupled receptor associated sorting protein 1 (Gprasp1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C87852; MGC100209; GASP1; GASP; 3110031O14Rik; 2210415K24Rik	C87852; MGC100209; GASP1; GASP; 3110031O14Rik; 2210415K24Rik
Mus musculus	RefSeq	ILMN_219331	ILMN_219331	GPRASP1	NM_026081.5	NM_026081.5		67298	53729356	NM_026081.5	Gprasp1	NP_080357.4	ILMN_3142384	000780035	A	5027	CGTGTGTCAGATTTGCGAGGACACCTTTGACTATGACTTGGATTCCCCTG	X	+	132337156-132337205	XqF1	Mus musculus G protein-coupled receptor associated sorting protein 1 (Gprasp1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C87852; MGC100209; GASP1; GASP; 3110031O14Rik; 2210415K24Rik	C87852; MGC100209; GASP1; GASP; 3110031O14Rik; 2210415K24Rik
Mus musculus	RefSeq	ILMN_187059	ILMN_245875	WHSC1	XM_898312.2	XM_898312.2		107823	94374667	XM_898312.2	Whsc1	XP_903405.2	ILMN_1257095	006550273	S	3727	CGCTGTAGACTGTGGTGTTTGGACCGTTTAGTGAGGTCAGTGTCAGAGAG	5	+	34204499-34204548	5qB2	PREDICTED: Mus musculus Wolf-Hirschhorn syndrome candidate 1 (human), transcript variant 6 (Whsc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194197	ILMN_194197	USP34	scl0017847.1_284				51766316	XM_483996	Usp34		ILMN_2504282	006590022	S	20	GTGAGACTAACATAAGGAGGATCAATTTTGATATTTGGGAACCATTTTCC							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	RefSeq	ILMN_260560	ILMN_260560	MORN3	NM_029112.1	NM_029112.1		74890	110626065	NM_029112.1	Morn3	NP_083388.1	ILMN_3007767	002600528	S	775	CAGCCGAAGCCTCTCCGTGCCCCTGAACAATGCTGACCTTCTGGTATCAC	5	-	123487238-123487287	5qF	Mus musculus MORN repeat containing 3 (Morn3), mRNA.				4930438O03Rik	4930438O03Rik
Mus musculus	RefSeq	ILMN_184213	ILMN_260560	MORN3	NM_029112.1	NM_029112.1		74890	110626065	NM_029112.1	Morn3	NP_083388.1	ILMN_1223151	005700672	S	624	CAAGTGTGGCACCATGATCGACTTTGGCCGTGATGAGGCCCCTGAACCCA	5	-	123487704-123487753	5qF	Mus musculus MORN repeat containing 3 (Morn3), mRNA.				4930438O03Rik	4930438O03Rik
Mus musculus	RefSeq	ILMN_200484	ILMN_260560	MORN3	NM_029112.1	NM_029112.1		74890	110626065	NM_029112.1	Morn3	NP_083388.1	ILMN_1250365	005270088	S	144	GAACGGCGATCACTACGTGGGCGAATGGAAGGGCAACTTGAAACACGGGA	5	-	123491246-123491249:123496640-123496685	5qF	Mus musculus MORN repeat containing 3 (Morn3), mRNA.				4930438O03Rik	4930438O03Rik
Mus musculus	RefSeq	ILMN_209170	ILMN_209170	RDH1	NM_080436.2	NM_080436.2		107605	142349108	NM_080436.2	Rdh1	NP_536684.1	ILMN_2768970	001580524	S	2458	TCCAACCCTATCATGTGCCTGGCCATCCATTTAATTTATGTTATTTTGAA	10	+	127203970-127204019	10qD3	Mus musculus retinol dehydrogenase 1 (all trans) (Rdh1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IDA]; The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 1523] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction in which one substrate is a sterol derivative [goid 16229] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209170	ILMN_209170	RDH1	NM_080436.2	NM_080436.2		107605	142349108	NM_080436.2	Rdh1	NP_536684.1	ILMN_1230677	000050367	S	2491	ATTTATGTTATTTTGAAAGCTTTGTTTTAGGACCTTTGAGCATATGTTTG	10	+	127204003-127204052	10qD3	Mus musculus retinol dehydrogenase 1 (all trans) (Rdh1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IDA]; The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 1523] [evidence IDA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction in which one substrate is a sterol derivative [goid 16229] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212408	ILMN_212408	CACNG6	NM_133183.1	NM_133183.1		54378	21687181	NM_133183.1	Cacng6	NP_573446.1	ILMN_1256031	003780056	S	599	TGCAGGGAGTCAACCCTGAGACCCCTCCAGCTCCACGCCTGGCCTATGAG	7	+	3435474-3435523	7qA1	Mus musculus calcium channel, voltage-dependent, gamma subunit 6 (Cacng6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC144252; AW050150; MGC144251; 2310033H20Rik	MGC144252; AW050150; MGC144251; 2310033H20Rik
Mus musculus	Riken	ILMN_205171	ILMN_205171	B230341H15RIK	ri|B230341H15|PX00160D09|AK046093|1906					AK046093	B230341H15Rik		ILMN_2570525	001110152	S	1353	AATTGCAATTGGAAGATGTGTTAGGAAAGCCCGGCAGTGACAGCATCGTG										
Mus musculus	RefSeq	ILMN_215382	ILMN_215382	RRAS	NM_009101.2	NM_009101.2		20130	133891823	NM_009101.2	Rras	NP_033127.1	ILMN_2658804	005890064	S	767	CTGGGTTCCCCAGGACACACTACACCCTCTTACTTTTACTTCCTGGCCTC	7	+	52276835-52276884	7qB4	Mus musculus Harvey rat sarcoma oncogene, subgroup R (Rras), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IGI]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC129444; MGC129445; AI573426	MGC129444; MGC129445; AI573426
Mus musculus	Riken	ILMN_206146	ILMN_206146	ARTS1-PENDING	ri|B930097N13|PX00166N18|AK081181|2434					AK081181	Arts1-pending		ILMN_1213653	005360592	S	1964	GTTGGCCTGAAGCCAGCTCTGATCTAAGTAGGCAGTTGCTGTGAAGTCAC										
Mus musculus	Riken	ILMN_202062	ILMN_202062	2610205L13RIK	ri|2610205L13|ZX00061N01|AK011893|1869					AK011893	2610205L13Rik		ILMN_1235178	007400605	S	1541	TGCTGAAGCAGCTCGGTCGATCCAGAAGAACGGGTGATCAGTAGAGAGAA										
Mus musculus	MEEBO	ILMN_214037	ILMN_214037	SLIT3	scl41696.36.110_2	XM_203363.3			38091325	XM_203363.3	Slit3		ILMN_2643545	000870768	S	4249	GCCACCATGGGCAGTGTCACATCTCAGATCGAGGGGAGCCCTATTGCCTA						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IGI]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_206728	ILMN_206728	C230064E22RIK	ri|C230064E22|PX00176G15|AK082565|2326					AK082565	C230064E22Rik		ILMN_1213627	005490592	S	1920	CAACTCGCTTCAAACAGCCACAGAAAACACACAGGCCTACTGGGGTAACC										
Mus musculus	RefSeq	ILMN_259662	ILMN_259662	MAP2K7	NM_011944.2	NM_011944.2		26400	110347550	NM_011944.2	Map2k7	NP_036074.2	ILMN_3035785	000940100	I	1431	ACCTGGGACCTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTT	8	+	4245919-4245968	8qA1.1	Mus musculus mitogen-activated protein kinase kinase 7 (Map2k7), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; A series of molecular signals in which a stress-activated MAP kinase cascade relays one or more of the signals; MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase [goid 51403] [evidence IDA]	Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MKK7; 5930412N11Rik; Jnkk2; Prkmk7; sek2	MKK7; 5930412N11Rik; Jnkk2; Prkmk7; sek2
Mus musculus	RefSeq	ILMN_217580	ILMN_217580	HMHA1	NM_027521.2	NM_027521.2		70719	34328299	NM_027521.2	Hmha1	NP_081797.1	ILMN_2685023	004850594	S	3257	CTCATCTCTCCCATGGTCCCCATCAGTCTGGATGTGTCTGAGCGGGTACA	10	+	79493993-79494042	10qC1	Mus musculus histocompatibility (minor) HA-1 (Hmha1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	6330406L22Rik; Ha-1; AW539505	6330406L22Rik; Ha-1; AW539505
Mus musculus	RefSeq	ILMN_216887	ILMN_216887	RIOK1	NM_024242.2	NM_024242.2		71340	22208994	NM_024242.2	Riok1	NP_077204.2	ILMN_2940802	007570554	S	1940	CTCACTGTCAGAGGAGGCTGGGGTGTGGTCATGTGATTGTTTCAAAAGCC	13	+	38152804-38152853	13qA3.3	Mus musculus RIO kinase 1 (yeast) (Riok1), mRNA.			Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	5430416A05Rik; Ad034; MGC7300; AL033302; 3110046C13Rik	5430416A05Rik; Ad034; MGC7300; AL033302; 3110046C13Rik
Mus musculus	RefSeq	ILMN_216887	ILMN_216887	RIOK1	NM_024242.2	NM_024242.2		71340	22208994	NM_024242.2	Riok1	NP_077204.2	ILMN_2676512	003460070	S	1703	GCAGGAAGATCAAGCCGGATGCAGAAACCATATTGCTGACCCTGACATTG	13	+	38151905-38151954	13qA3.3	Mus musculus RIO kinase 1 (yeast) (Riok1), mRNA.			Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	5430416A05Rik; Ad034; MGC7300; AL033302; 3110046C13Rik	5430416A05Rik; Ad034; MGC7300; AL033302; 3110046C13Rik
Mus musculus	RefSeq	ILMN_216887	ILMN_216887	RIOK1	NM_024242.2	NM_024242.2		71340	22208994	NM_024242.2	Riok1	NP_077204.2	ILMN_1234580	005220491	S	680	GTTGTTGCATAAAGACCACATATCAGAGATACATGGCTGTATTAGCACTG	13	+	38139150-38139199	13qA3.3	Mus musculus RIO kinase 1 (yeast) (Riok1), mRNA.			Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	5430416A05Rik; Ad034; MGC7300; AL033302; 3110046C13Rik	5430416A05Rik; Ad034; MGC7300; AL033302; 3110046C13Rik
Mus musculus	Riken	ILMN_205127	ILMN_205127	SLIT2	ri|E130320P19|PX00209G05|AK053913|3264					AK053913	Slit2		ILMN_1258994	003780367	S	2838	GAGCCACAGATGAGATCCATTTCCAAGCCTTCACTTCTATTCTCCTTGAG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]		
Mus musculus	RefSeq	ILMN_215366	ILMN_215366	DNM1	NM_010065.2	NM_010065.2		13429	116063569	NM_010065.2	Dnm1	NP_034195.2	ILMN_2722984	006180097	S	1351	AGATTCGAGAGCCGTGTCTCAAGTGTGTGGACATGGTTATCTCGGAGCTA	2	-	32190231-32190280	2qB	Mus musculus dynamin 1 (Dnm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA4093; KIAA4093; Dnm; AI838169	mKIAA4093; KIAA4093; Dnm; AI838169
Mus musculus	Riken	ILMN_205523	ILMN_205523	D130046B10RIK	ri|D130046B10|PX00184O08|AK051398|3664					AK051398	D130046B10Rik		ILMN_1224519	003830379	S	3327	TGGCTTTCAGCAACGTAGCCCCTTTCTTTGTGTCATGGCTTTCTCATGGG										
Mus musculus	Riken	ILMN_202573	ILMN_202573	TRPM7	ri|2310022G15|ZX00081P21|AK009470|1004					AK009470	Trpm7		ILMN_2550631	004290689	S	772	GGCCAGCCGGGTTTACATAGTGAGTTACAGGTTAGCCAGAACTGCTGGTA						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The binding of a cell to the extracellular matrix via adhesion molecules that require the presence of calcium for the interaction [goid 16340] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199706	ILMN_199706	LOC383853	XM_357294.1	XM_357294.1			38076280	XM_357294.1	LOC383853		ILMN_1229369	002140445	S	162	AGTACATGAAATCGCCTGGATTTTAAAGATGTCTATTATACAAATCATGA										
Mus musculus	Riken	ILMN_207340	ILMN_207340	6820406G21RIK	ri|6820406G21|PX00649D12|AK078477|2470					AK078477	6820406G21Rik		ILMN_2586877	006480465	S	2318	GTCCCTGGTGCTGGAATTACATGCAGTGTGAGCTGCCCAATGTTGGTTCC										
Mus musculus	RefSeq	ILMN_195821	ILMN_324044	2610001J05RIK	XR_035242.1	XR_035242.1		66520	149254857	XR_035242.1	2610001J05Rik		ILMN_2519030	003890240	S	2165	TAGTGTGCAGACCCTTTCCCCACTGAACTGATGTGGCATGCCTGAGAGTT	6	-	13819128-13819177	6qA1	PREDICTED: Mus musculus RIKEN cDNA 2610001J05 gene (2610001J05Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_195821	ILMN_324044	2610001J05RIK	XR_035242.1	XR_035242.1		66520	149254857	XR_035242.1	2610001J05Rik		ILMN_2669507	004890561	S	1345	TGTTTTTATCTCGCAAGTTGATATTGTACTTAGATCTTAGCCAAAAACTT	6	-	13819948-13819997	6qA1	PREDICTED: Mus musculus RIKEN cDNA 2610001J05 gene (2610001J05Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_191227	ILMN_311516	LOC665682	XR_034669.1	XR_034669.1		665682	149267395	XR_034669.1	LOC665682		ILMN_2477259	000830047	S	716	TTACTTAGGTAGAAACTCGTGGTGATTTTAAGATTGGAAAAGAATCTGAG	16	+	15609900-15609949	16qA2	PREDICTED: Mus musculus similar to Translocase of outer mitochondrial membrane 20 homolog (yeast) (LOC665682), misc RNA.					
Mus musculus	RefSeq	ILMN_222207	ILMN_222207	PLEKHG3	NM_153804.3	NM_153804.3		263406	83165283	NM_153804.3	Plekhg3	NP_722499.3	ILMN_2783500	005870047	S	4613	TTACTGGCTGGCCACTGCCTGGCTGAGAACCCAAGGGAGAGACCTAGGAA	12	+	77679706-77679755	12qC3	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 3 (Plekhg3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	BC030417; MGC40768	BC030417; MGC40768
Mus musculus	RefSeq	ILMN_197005	ILMN_222207	PLEKHG3	NM_153804.3	NM_153804.3		263406	83165283	NM_153804.3	Plekhg3	NP_722499.3	ILMN_1221920	005870692	S	4839	TCAGGTACTCTCGAAGGTTGTCTTGCTGGCCCTGTGGTGGTTGCCAATGG	12	+	77679932-77679981	12qC3	Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 3 (Plekhg3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	BC030417; MGC40768	BC030417; MGC40768
Mus musculus	Riken	ILMN_204173	ILMN_204173	STAG1	ri|A730071G14|PX00152A02|AK043215|1013					AK043215	Stag1		ILMN_2562944	007000364	S	444	AGTGTTACAGGATTCAACTAATGAAACTACTGCCCACTCTGATGCTGGCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]			
Mus musculus	RefSeq	ILMN_220962	ILMN_220962	HIC1	NM_010430.2	NM_010430.2		15248	148226884	NM_010430.2	Hic1	NP_034560.2	ILMN_2729197	000780750	S	4009	GTCCCCTCCTCTTCCTGGGGTCCCCGGACCATATATTTATTGCATGCGCC				11qB5	Mus musculus hypermethylated in cancer 1 (Hic1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	HIC-1; AA408311	HIC-1; AA408311
Mus musculus	RefSeq	ILMN_188880	ILMN_257475	1700080G18RIK	XM_988959.2	XM_988959.2		73533	149254980	XM_988959.2	1700080G18Rik	XP_994053.2	ILMN_2456536	000520767	S	820	CCAAAGCGGCTCCCCCACATTTTACTCGGCGCGCCTTTGCGTAGTCGCCT				6qA3.3	PREDICTED: Mus musculus RIKEN cDNA 1700080G18 gene (1700080G18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200289	ILMN_200289	LOC386144	XM_359091.1	XM_359091.1			38081228	XM_359091.1	LOC386144		ILMN_2538242	005570333	S	71	CGCCCACTTCGCCCAATCCAGGACACCCTAACACACCTGAAAAGGTAGAC										
Mus musculus	MEEBO	ILMN_224093	ILMN_224093	BC024063	scl00237409.1_112				51765956	XM_483927	BC024063		ILMN_1253481	005310349	S	1519	GTACTCATTGTAGTAAAGCTTTTGCAAGTCGTAGTTATCTCCGAATACAC										
Mus musculus	RefSeq	ILMN_191873	ILMN_191873	UPK2	NM_009476.2	NM_009476.2		22269	121949818	NM_009476.2	Upk2	NP_033502.2	ILMN_1258907	002650554	S	770	CTTGCAGCACTCCCTGCTAGCCCCACTGCAATCCTGCCAACACTGATTTA	9	-	44260852-44260901	9qA5.2	Mus musculus uroplakin 2 (Upk2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IEA]		MGC129164; MGC129165; UPII; AW491716	MGC129164; MGC129165; UPII; AW491716
Mus musculus	RefSeq	ILMN_223973	ILMN_240204	ADAM3	NM_009619.4	NM_009619.4		11497	121949803	NM_009619.4	Adam3	NP_033749.2	ILMN_2772470	006840576	S	2608	CTGTGGTCTGATACAAGAGCAAGAACTAGCCCATCTCTTTCTCTGTGGCT	8	-	25787755-25787804	8qA2	Mus musculus a disintegrin and metallopeptidase domain 3 (cyritestin) (Adam3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IMP]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IDA]		Cyrn1; Taz83; MGC150317; tMDC	Cyrn1; Taz83; MGC150317; tMDC
Mus musculus	RefSeq	ILMN_215996	ILMN_215996	GPA33	NM_021610.1	NM_021610.1		59290	11037799	NM_021610.1	Gpa33	NP_067623.1	ILMN_2666173	000580437	S	2226	ATACTTGGCTAAATTCTTTGTTTCAATCAAAATGTTTCTTTATCAATAAA	1	+	168096574-168096623	1qH2.3	Mus musculus glycoprotein A33 (transmembrane) (Gpa33), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]			2210401D16Rik; 2010310L10Rik; BB116197	2210401D16Rik; 2010310L10Rik; BB116197
Mus musculus	RefSeq	ILMN_200269	ILMN_200269	LOC386115	XM_359074.1	XM_359074.1			38081159	XM_359074.1	LOC386115		ILMN_1250920	007210348	S	2804	GCTGCCTTAAAAAATGGGGCTCAGAGCTGAACAAAGAATTCTCACTCGAG										
Mus musculus	MEEBO	ILMN_187388	ILMN_187388	D130017N08RIK	scl00320064.1_316						D130017N08Rik		ILMN_1247385	001410575	S	3	GTTCCTTCCTGTCTTGTGACTCACACCACATAGGCTAGCTAGGTCAAGTG										
Mus musculus	RefSeq	ILMN_213632	ILMN_213632	CYP19A1	NM_007810.2	NM_007810.2		13075	142373634	NM_007810.2	Cyp19a1	NP_031836.1	ILMN_2639157	003830414	S	2215	GGTGTCGTTTCTTACTCTCAATTTGTGCTCCCAGGAGTGTAGTTAGACTG	9	-	54013852-54013901	9qA5.3	Mus musculus cytochrome P450, family 19, subfamily a, polypeptide 1 (Cyp19a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IDA]	MGC124252; Cyp19; p450arom; Ar; Int5; MGC124251; ArKO; Int-5	MGC124252; Cyp19; p450arom; Ar; Int5; MGC124251; ArKO; Int-5
Mus musculus	RefSeq	ILMN_212400	ILMN_212400	TCP11L2	NM_146008.2	NM_146008.2		216198	118130244	NM_146008.2	Tcp11l2	NP_666120.1	ILMN_2625981	003830338	S	2277	TTATTAGGGTTTTTTAGAATCATAGCTCTTGGCATGTTTATTTAGTTTTT	10	+	84076977-84077026	10qC1	Mus musculus t-complex 11 (mouse) like 2 (Tcp11l2), mRNA.				E430026E19Rik; MGC39016	E430026E19Rik; MGC39016
Mus musculus	RefSeq	ILMN_245648	ILMN_245648	DEFB30	NM_001039566.1	NM_001039566.1		73670	88595374	NM_001039566.1	Defb30	NP_001034655.1	ILMN_3006047	005720364	S	185	GTGGCATTCAGTCGTTGTGCTGCTTAGAGAAAAAGGAAATGCCCGTTCTC	14	-	63654780-63654829	14qD1	Mus musculus defensin beta 30 (Defb30), mRNA.				4930449O14Rik; Defb30	4930449O14Rik; Defb30
Mus musculus	Riken	ILMN_206888	ILMN_206888	E030028L09RIK	ri|E030028L09|PX00205N19|AK087122|2319					AK087122	E030028L09Rik		ILMN_2583439	007210279	S	2108	TCTGGACAAAGCTACTGTGATCTAATGCAAGTGTTTCACCCCTCGCTCCC										
Mus musculus	RefSeq	ILMN_197048	ILMN_197048	LOC381311	XM_355258.5	XM_355258.5		381311	94364590	XM_355258.5	LOC381311	XP_355258.5	ILMN_1254664	005900156	S	5361	CGAGTCCCTCATCCTCATCGAGGCCATCCGAGAAGCCAGTTTGTCCAAGC	1	+	183503049-183503098		PREDICTED: Mus musculus gene model 980, (NCBI) (LOC381311), mRNA.					
Mus musculus	RefSeq	ILMN_219170	ILMN_219170	4932702K14RIK	NM_026226.1	NM_026226.1		67543	21312911	NM_026226.1	4932702K14Rik	NP_080502.1	ILMN_2975779	002260468	S	2899	GGGAAGAAGGGAGATAGAAGACTTGGAGATAGAGGGAGCAGTTTGGATGG	17	-	9510105-9510154	17qA1	Mus musculus RIKEN cDNA 4932702K14 gene (4932702K14Rik), mRNA.				MGC132900; AI428050	MGC132900; AI428050
Mus musculus	RefSeq	ILMN_239840	ILMN_239840	TXNDC15	NM_175150.3	NM_175150.3		69672	52693934	NM_175150.3	Txndc15	NP_780359.2	ILMN_2923736	003890176	S	1453	GATGGGAAGTATGGGCTAGGACGGGAAGTGCAGGTCTACTACAGGACCAG	13	+	55827514-55827563	13qB1	Mus musculus thioredoxin domain containing 15 (Txndc15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		C5orf14; UNQ335; AI854086	C5orf14; UNQ335; AI854086
Mus musculus	RefSeq	ILMN_215076	ILMN_239840	TXNDC15	NM_175150.3	NM_175150.3		69672	52693934	NM_175150.3	Txndc15	NP_780359.2	ILMN_2655250	005910195	S	861	GCTGTCCCTAACATTTTGTTATTTCAAGGAGCTAAACCAATGGCAAGGTT	13	+	55825894-55825943	13qB1	Mus musculus thioredoxin domain containing 15 (Txndc15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		C5orf14; UNQ335; AI854086	C5orf14; UNQ335; AI854086
Mus musculus	RefSeq	ILMN_218194	ILMN_218194	PRPF39	NM_177806.2	NM_177806.2		328110	31342973	NM_177806.2	Prpf39	NP_808474.1	ILMN_2692799	004390021	S	2619	GGTTGCAACTGCATTCAAAACCTGTATGTTGGCAGAACATGTCATCTACT	12	+	66163953-66164002	12qC1	Mus musculus PRP39 pre-mRNA processing factor 39 homolog (yeast) (Prpf39), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC37077; FLJ11128; Srcs1	MGC37077; FLJ11128; Srcs1
Mus musculus	MEEBO	ILMN_216370	ILMN_216370	2200002J24RIK	scl32807.4.1_103	XM_133286.2			38086230	XM_133286.2	2200002J24Rik		ILMN_2670295	003830066	S	442	TAATTAGTCTTTGAAACAGAGGGTATGACAACCCTCCTGAAGGCTCACCT										
Mus musculus	RefSeq	ILMN_220524	ILMN_220524	GUCA1A	NM_008189.2	NM_008189.2		14913	40254632	NM_008189.2	Guca1a	NP_032215.2	ILMN_2723190	001710577	S	559	GCCGAGGAATTCACAGATACCGTGTTTGCCAAGATCGACATCAACGGGGA	17	-	47532058-47532107	17qC	Mus musculus guanylate cyclase activator 1a (retina) (Guca1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of guanylate cyclase activity [goid 31282] [evidence IGI]	 [goid 8048] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Modulates the activity of guanylate cyclase [goid 30249] [evidence IGI]	GC-A; Guca1; mGCAP1; Gcap1	GC-A; Guca1; mGCAP1; Gcap1
Mus musculus	RefSeq	ILMN_205109	ILMN_311081	LOC100044529	XM_001472296.1	XM_001472296.1		100044529	149269904	XM_001472296.1	LOC100044529	XP_001472346.1	ILMN_1236288	001110500	S	1981	GCACCCCACCAACTGAGGACCAAGTAGTCAAACACATGAGCCTATGGGGG					PREDICTED: Mus musculus similar to Desmoglein 2 (LOC100044529), mRNA.					
Mus musculus	RefSeq	ILMN_185589	ILMN_233967	CLK1	NM_001042634.1	NM_001042634.1		12747	111038134	NM_001042634.1	Clk1	NP_001036099.1	ILMN_2428301	004260370	S	583	GAGTGTAGAGGATGATGAGGAGGGTCACCTGATCTGTCAGAGTGGAGACG	1	-	58476979-58477028	1qC1.3	Mus musculus CDC-like kinase 1 (Clk1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]	STY	STY
Mus musculus	RefSeq	ILMN_215853	ILMN_233967	CLK1	NM_001042634.1	NM_001042634.1		12747	111038134	NM_001042634.1	Clk1	NP_001036099.1	ILMN_2767905	005310086	S	1728	ATGCTTTATTAAATACATGGCCAAACCAAATAACATCTTTCAGTAATTAT	1	-	58468884-58468933	1qC1.3	Mus musculus CDC-like kinase 1 (Clk1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]	STY	STY
Mus musculus	RefSeq	ILMN_208673	ILMN_208673	NKX2-1	NM_009385.2	NM_009385.2		21869	40254604	NM_009385.2	Nkx2-1	NP_033411.2	ILMN_2620250	006660546	S	1404	TAGTCAAAGACGGCAAACCCTGCCAGGCGGGCGCCCCTGCCCCGGGAGCC	12	-	57634300-57634349	12qC1	Mus musculus NK2 homeobox 1 (Nkx2-1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain [goid 21798] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	AV026640; Nkx2-1; T/EBP; Nkx2.1; Ttf-1; Nkx-2.1	AV026640; Nkx2-1; T/EBP; Nkx2.1; Ttf-1; Nkx-2.1
Mus musculus	RefSeq	ILMN_208673	ILMN_208673	NKX2-1	NM_009385.2	NM_009385.2		21869	40254604	NM_009385.2	Nkx2-1	NP_033411.2	ILMN_1260212	001690215	S	2668	GGGGCATTGACAAACCTGTGTATATTATTTGGCAGTTTGGTATTTGCAGC	12	-	57633036-57633085	12qC1	Mus musculus NK2 homeobox 1 (Nkx2-1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain [goid 21798] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISO]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]	AV026640; Nkx2-1; T/EBP; Nkx2.1; Ttf-1; Nkx-2.1	AV026640; Nkx2-1; T/EBP; Nkx2.1; Ttf-1; Nkx-2.1
Mus musculus	RefSeq	ILMN_233422	ILMN_233422	TOP1MT	NM_028404.1	NM_028404.1		72960	50657344	NM_028404.1	Top1mt	NP_082680.1	ILMN_3096933	003290296	A	1694	CCCCAGGATCAGCATCGCCTGGTGTAAGAGATTTGGAGTGCCTGTGGAGA	15	-	75484439-75484469:75484939-75484957	15qD3	Mus musculus DNA topoisomerase 1, mitochondrial (Top1mt), mRNA.			Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IEA]	2900052H09Rik	2900052H09Rik
Mus musculus	RefSeq	ILMN_233422	ILMN_233422	TOP1MT	NM_028404.1	NM_028404.1		72960	50657344	NM_028404.1	Top1mt	NP_082680.1	ILMN_3024238	004760220	I	87	TGCCGCGTCCCTTCCTGTCAGGTGTCCCGGGTCGCGAAGGCGAACAGAGC	15	-	75505909-75505958	15qD3	Mus musculus DNA topoisomerase 1, mitochondrial (Top1mt), mRNA.			Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IEA]	2900052H09Rik	2900052H09Rik
Mus musculus	RefSeq	ILMN_220044	ILMN_250089	OLFR1298	NM_146886.1	NM_146886.1		258888	22129114	NM_146886.1	Olfr1298	NP_667097.1	ILMN_2716943	000940273	S	637	CTGTTACTTTTTTCCTACACATATATCCTCATCACTGTTCGCCAGACTTC	2	-	111485466-111485515	2qE3	Mus musculus olfactory receptor 1298 (Olfr1298), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR248-6	MOR248-6
Mus musculus	Riken	ILMN_202897	ILMN_202897	MAPK8	ri|6430564C21|PX00047K12|AK032486|2272					AK032486	Mapk8		ILMN_1214761	002480017	S	2014	TCCTCTCAGACACACACACACAGGGGAGGGGGGTAGAAAGAGAGTTTTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of introducing a phosphate group into a JUN protein [goid 7258] [evidence IMP]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IMP]; The process of introducing a phosphate group into a JUN protein [goid 7258] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]		
Mus musculus	RefSeq	ILMN_234895	ILMN_234895	TMEM151B	NM_001013749.1	NM_001013749.1		210573	85701443	NM_001013749.1	Tmem151b	NP_001013771.1	ILMN_3125699	002750017	A	1411	TACCCAGCTACTCGGAGGTGTTGCTTATGGACCTGGTCGAGCTGGGCTCA	17	-	45682279-45682328	17qB3	Mus musculus transmembrane protein 151B (Tmem151b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_234895	ILMN_234895	TMEM151B	NM_001013749.1	NM_001013749.1		210573	85701443	NM_001013749.1	Tmem151b	NP_001013771.1	ILMN_3049726	004480593	I	3963	GAAACTGAGCTTGGCCTTGGGAGAGGAGGGGGTGGGGAAGCCCCGTTATT	17	-	45679727-45679776	17qB3	Mus musculus transmembrane protein 151B (Tmem151b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_204576	ILMN_204576	C130028D08RIK	ri|C130028D08|PX00168E19|AK047991|2438					AK047991	C130028D08Rik		ILMN_1247114	001450703	S	1457	GCCTGTCCATGGATTCTCTTTCTTGTGCTGGAAGGCAGTGTCACTAGCTC										
Mus musculus	RefSeq	ILMN_217663	ILMN_219721	FAM110A	NM_028666.2	NM_028666.2		73847	145864468	NM_028666.2	Fam110a	NP_082942.2	ILMN_2740890	001090228	S	1542	AAAGTTTGCGACACAAGTGTGCTTCTGCCTGTTTCCTCCGGTGACACTGG				2qG3	Mus musculus family with sequence similarity 110, member A (Fam110a), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			1700008J10Rik; MGC30344; AI747080	1700008J10Rik; MGC30344; AI747080
Mus musculus	RefSeq	ILMN_219721	ILMN_219721	FAM110A	NM_028666.2	NM_028666.2		73847	145864468	NM_028666.2	Fam110a	NP_082942.2	ILMN_2712703	006220403	S	209	CACACCGTCTGAGTCTCCAGGATTGCCTCCAAGTGAGGACGACCCGAAAC				2qG3	Mus musculus family with sequence similarity 110, member A (Fam110a), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			1700008J10Rik; MGC30344; AI747080	1700008J10Rik; MGC30344; AI747080
Mus musculus	RefSeq	ILMN_213832	ILMN_213832	PSMA2	NM_008944.2	NM_008944.2		19166	134031993	NM_008944.2	Psma2	NP_032970.2	ILMN_2641238	001990288	S	713	GGGATTACCTGGCTGCCATAGCGTGATGAAGATGTGCTCACACACTCGAC	13	+	14717707-14717732:14717733-14717756	13qA1	Mus musculus proteasome (prosome, macropain) subunit, alpha type 2 (Psma2), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	Lmpc3	Lmpc3
Mus musculus	RefSeq	ILMN_212868	ILMN_212868	FCGR4	NM_144559.1	NM_144559.1		246256	21362368	NM_144559.1	Fcgr4	NP_653142.1	ILMN_2631161	000830632	S	1158	GGACTCTGGGTGGCGATGGCGATCCTTTCCGTGCTTAGCCATTGCTCCTA	1	+	172959813-172959862	1qH3	Mus musculus Fc receptor, IgG, low affinity IV (Fcgr4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	4833442P21Rik; FcgammaRIV; CD16-2; FcgRIV; Fcrl3; Fcgr3a	4833442P21Rik; FcgammaRIV; CD16-2; FcgRIV; Fcrl3; Fcgr3a
Mus musculus	RefSeq	ILMN_217339	ILMN_224373	ZFP651	XM_914267.2	XM_914267.2		270210	94386780	XM_914267.2	Zfp651	XP_919360.2	ILMN_1252667	002940343	S	1736	TCTGTGGCCAGTGTGGGAAGCGCTTCCTGCTGGAGAGTGAGCTGCAGCTG					PREDICTED: Mus musculus zinc finger protein 651 (Zfp651), mRNA.					
Mus musculus	RefSeq	ILMN_194419	ILMN_254854	NAB2	NM_008668.1	NM_008668.1		17937	6679003	NM_008668.1	Nab2	NP_032694.1	ILMN_2641956	007380368	S	2288	TTAACAAGTGCTGCAGTTTGCCCACCCGTTCTTATCTCCCCCCTCCCCGC	10	-	127098186-127098235	10qD3	Mus musculus Ngfi-A binding protein 2 (Nab2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]; Any process that modulates the frequency, rate or extent of epidermis development [goid 45682] [evidence IGI]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IGI]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IGI]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IGI]	AI451907	AI451907
Mus musculus	RefSeq	ILMN_196774	ILMN_196774	KLK1B27	NM_020268.3	NM_020268.3		16619	149363690	NM_020268.3	Klk1b27	NP_064664.1	ILMN_1252131	004670021	S	78	CCTGTCCCTAGGAGGGATTGATGCTGCGCCTCCTGTCCAGTCTAGAATAA				7qB4	Mus musculus kallikrein 1-related peptidase b27 (Klk1b27), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	Gk27; Klk27; mGK-27	Gk27; Klk27; mGK-27
Mus musculus	RefSeq	ILMN_192790	ILMN_248670	MERTK	NM_008587.1	NM_008587.1		17289	7106354	NM_008587.1	Mertk	NP_032613.1	ILMN_2714638	004920193	S	3458	GGTACTTGTTTTCCTTACCAAGTAGAGTTCATGGCCGGACAGCACCAGGT	2	+	128627827-128627876	2qF1	Mus musculus c-mer proto-oncogene tyrosine kinase (Mertk), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Mer; Nyk; Eyk	Mer; Nyk; Eyk
Mus musculus	RefSeq	ILMN_215507	ILMN_215507	BARHL1	NM_019446.2	NM_019446.2		54422	31542216	NM_019446.2	Barhl1	NP_062319.1	ILMN_2822107	000650768	S	3431	GTGAATGCAGGCTGGTAAATCCCTCGATCTGGCTGTGGTGGGGTGTGAGG	2	-	28729882-28729931	2qA3	Mus musculus BarH-like 1 (Drosophila) (Barhl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MBH2; Dres115	MBH2; Dres115
Mus musculus	RefSeq	ILMN_226244	ILMN_226244	FARS2	NM_001039189.1	NM_001039189.1		69955	85719321	NM_001039189.1	Fars2	NP_001034278.1	ILMN_3139479	004220634	A	1418	CTGGAGTGTCTGCCCTCACTTGACAGATGGGTCTACTTTAGGACGTCACG	13	+	36629387-36629436	13qA3.3	Mus musculus phenylalanine-tRNA synthetase 2 (mitochondrial) (Fars2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process of coupling phenylalanine to phenylalanyl-tRNA, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6432] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe) [goid 4826] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with transfer RNA [goid 49] [evidence IEA]	Fars1; 2810431B21Rik; 6720478K01Rik	Fars1; 2810431B21Rik; 6720478K01Rik
Mus musculus	MEEBO	ILMN_217485	ILMN_217485	SPNB4	scl000115.1_57	NM_032610.1			30794219	NM_032610.1	Spnb4		ILMN_1250462	006400209	S	8178	ATCTAGGAGGTGGTGATTTGTTGGCCTCCTCTCCGCCCTAAGGATGGACA						Portion of the neuronal cell soma from which the axon originates [goid 43203] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence ISS]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ankyrin, a 200 kDa cytoskeletal protein that attaches other cytoskeletal proteins to integral membrane proteins [goid 30506] [evidence ISS]		
Mus musculus	MEEBO	ILMN_192524	ILMN_192524	2310061G22RIK	scl4670.1.1_55						2310061G22Rik		ILMN_2488888	001230392	S	17	CCGGTTTTTGAAATGGTGTCAGATTATGCCCCCTCTGGTGGCCTGGATTC										
Mus musculus	Riken	ILMN_206707	ILMN_206707	D630036H09RIK	ri|D630036H09|PX00318K15|AK085516|3041					AK085516	D630036H09Rik		ILMN_2582110	004730072	S	2678	GACCACACCATAGGCTGCGTGAGTGTGAGTGTGTATGCAAGTGTGTGCGC										
Mus musculus	RefSeq	ILMN_187366	ILMN_249999	PUM2	NM_030723.1	NM_030723.1		80913	13507677	NM_030723.1	Pum2	NP_109648.1	ILMN_2607160	002360064	S	3775	GCTTGCAGTCTGGTAGGTCTACAACCCCATAGCACAACAGGTTTATAGAG	12	+	8756936-8756985	12qA1.1	Mus musculus pumilio 2 (Drosophila) (Pum2), mRNA. XM_919820 XM_919830 XM_919843 XM_919849	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pumm2; mKIAA0235; 5730503J23Rik	Pumm2; mKIAA0235; 5730503J23Rik
Mus musculus	RefSeq	ILMN_196378	ILMN_231882	A030014E15RIK	XM_896395.2	XM_896395.2		77917	94363732	XM_896395.2	A030014E15Rik	XP_901488.1	ILMN_1212690	004490689	S	545	GTAGGCTACAACTGTGACCTGAGTCTGTCACCAGCCTGTGGAAATCCCAC	1	+	82922036-82922085	1qC5	PREDICTED: Mus musculus RIKEN cDNA A030014E15 gene (A030014E15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188633	ILMN_188633	TNFRSF10B	NM_020275.3	NM_020275.3		21933	40789303	NM_020275.3	Tnfrsf10b	NP_064671.2	ILMN_2945095	001990541	S	2780	CCTTGGGTACTTTCTCTAGCTCCTCCACTAGGGGCCCTGTGTTCTATCCA	14	+	70183876-70183925	14qD2	Mus musculus tumor necrosis factor receptor superfamily, member 10b (Tnfrsf10b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [evidence RCA]; Interacting selectively with TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines [goid 45569] [evidence RCA]	Ly98; TRAILR2; TRICK2A; MK; KILLER; TRICKB; TRAIL-R2; DR5; TRICK2B; Killer/Dr5	Ly98; TRAILR2; TRICK2A; MK; KILLER; TRICKB; TRAIL-R2; DR5; TRICK2B; Killer/Dr5
Mus musculus	RefSeq	ILMN_188633	ILMN_188633	TNFRSF10B	NM_020275.3	NM_020275.3		21933	40789303	NM_020275.3	Tnfrsf10b	NP_064671.2	ILMN_2454348	003130092	S	1330	CCCCGAAGATGCAGGCTCTTCAGTATTATGAGAATGTACTTAATTTTTTC	14	+	70182426-70182475	14qD2	Mus musculus tumor necrosis factor receptor superfamily, member 10b (Tnfrsf10b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [evidence RCA]; Interacting selectively with TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines [goid 45569] [evidence RCA]	Ly98; TRAILR2; TRICK2A; MK; KILLER; TRICKB; TRAIL-R2; DR5; TRICK2B; Killer/Dr5	Ly98; TRAILR2; TRICK2A; MK; KILLER; TRICKB; TRAIL-R2; DR5; TRICK2B; Killer/Dr5
Mus musculus	RefSeq	ILMN_188633	ILMN_188633	TNFRSF10B	NM_020275.3	NM_020275.3		21933	40789303	NM_020275.3	Tnfrsf10b	NP_064671.2	ILMN_1230700	001300164	S	1980	GGTGACCCTTGAGGACCACGCCCCCTGTAAGCATTTGACCATTGTGAGAG	14	+	70183076-70183125	14qD2	Mus musculus tumor necrosis factor receptor superfamily, member 10b (Tnfrsf10b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [evidence RCA]; Interacting selectively with TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines [goid 45569] [evidence RCA]	Ly98; TRAILR2; TRICK2A; MK; KILLER; TRICKB; TRAIL-R2; DR5; TRICK2B; Killer/Dr5	Ly98; TRAILR2; TRICK2A; MK; KILLER; TRICKB; TRAIL-R2; DR5; TRICK2B; Killer/Dr5
Mus musculus	RefSeq	ILMN_188633	ILMN_188633	TNFRSF10B	NM_020275.3	NM_020275.3		21933	40789303	NM_020275.3	Tnfrsf10b	NP_064671.2	ILMN_2455181	001570100	S	1193	CTACGCAGTGAAATCCGGGAGGTTTACTTATCAGAACGCTGCAGCCCAAC	14	+	70182289-70182338	14qD2	Mus musculus tumor necrosis factor receptor superfamily, member 10b (Tnfrsf10b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [evidence RCA]; Interacting selectively with TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines [goid 45569] [evidence RCA]	Ly98; TRAILR2; TRICK2A; MK; KILLER; TRICKB; TRAIL-R2; DR5; TRICK2B; Killer/Dr5	Ly98; TRAILR2; TRICK2A; MK; KILLER; TRICKB; TRAIL-R2; DR5; TRICK2B; Killer/Dr5
Mus musculus	RefSeq	ILMN_188633	ILMN_188633	TNFRSF10B	NM_020275.3	NM_020275.3		21933	40789303	NM_020275.3	Tnfrsf10b	NP_064671.2	ILMN_2460875	002370017	S	1198	CAGTGAAATCCGGGAGGTTTACTTATCAGAACGCTGCAGCCCAACCAGAG	14	+	70182294-70182343	14qD2	Mus musculus tumor necrosis factor receptor superfamily, member 10b (Tnfrsf10b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [evidence RCA]; Interacting selectively with TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines [goid 45569] [evidence RCA]	Ly98; TRAILR2; TRICK2A; MK; KILLER; TRICKB; TRAIL-R2; DR5; TRICK2B; Killer/Dr5	Ly98; TRAILR2; TRICK2A; MK; KILLER; TRICKB; TRAIL-R2; DR5; TRICK2B; Killer/Dr5
Mus musculus	RefSeq	ILMN_220755	ILMN_220755	NQO1	NM_008706.4	NM_008706.4		18104	153791748	NM_008706.4	Nqo1	NP_032732.3	ILMN_2726371	004010673	S	571	CTATCACCACTGGGGGTAGCGGCTCCATGTACTCTCTTCAGGGTGTCCAC				8qD3	Mus musculus NAD(P)H dehydrogenase, quinone 1 (Nqo1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that stops or reduces the activity of an enzyme [goid 43086] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)(+) + a hydroquinone [goid 3955] [evidence IDA]	Dia4; Ox-1; Nmo-1; Nmor1; NMO1; Ox1; AV001255; QR1	Dia4; Ox-1; Nmo-1; Nmor1; NMO1; Ox1; AV001255; QR1
Mus musculus	RefSeq	ILMN_220755	ILMN_220755	NQO1	NM_008706.4	NM_008706.4		18104	153791748	NM_008706.4	Nqo1	NP_032732.3	ILMN_2766386	000780301	S	853	AAAAGGAAGTTCAAGAGGAGCAGAAGAAGAACAAGTTTGGCCTCTCTGTG				8qD3	Mus musculus NAD(P)H dehydrogenase, quinone 1 (Nqo1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that stops or reduces the activity of an enzyme [goid 43086] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)(+) + a hydroquinone [goid 3955] [evidence IDA]	Dia4; Ox-1; Nmo-1; Nmor1; NMO1; Ox1; AV001255; QR1	Dia4; Ox-1; Nmo-1; Nmor1; NMO1; Ox1; AV001255; QR1
Mus musculus	RefSeq	ILMN_216069	ILMN_216069	AUH	NM_016709.2	NM_016709.2		11992	116268114	NM_016709.2	Auh	NP_057918.2	ILMN_2666956	000150156	S	1151	AAAGCTAGCAATGTCCGTGGTCAAAACACGTAAAAATTAGGTATATGTTT	13	-	52930623-52930672	13qB1	Mus musculus AU RNA binding protein/enoyl-coenzyme A hydratase (Auh), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9083] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A major pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of ordered steps: poly(A) tail shortening, deadenylylation-dependent decapping, and decay of the transcript body, and that can regulate mRNA stability [goid 288] [evidence TAS]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O [goid 4300] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = trans-3-methylglutaconyl-CoA + H2O [goid 4490] [evidence IEA]	W91705; C77140	W91705; C77140
Mus musculus	RefSeq	ILMN_220536	ILMN_220536	MTRR	NM_172480.2	NM_172480.2		210009	142372988	NM_172480.2	Mtrr	NP_766068.1	ILMN_2723383	004290619	S	3621	CCTGGTGAAAAGTCATCACAAGACTCCTAGGTCATTATAAGAATTAAAGA	13	-	68699678-68699727	13qB3	Mus musculus 5-methyltetrahydrofolate-homocysteine methyltransferase reductase (Mtrr), mRNA.		Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISO]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence ISO]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence ISO]; Catalysis of the reaction: [methionine synthase]-cob(II)alamin + NADPH + H+ + S-adenosyl methionine = [methionine synthase]-methylcob(I)alamin + S-adenosylhomocysteine + NADP+ [goid 30586] [evidence ISO]; Catalysis of the reaction: 2 cob(II)alamin + NAD+ = 2 aquacob(III)alamin + NADH + H+ [goid 47138] [evidence ISO]	4732420G08	4732420G08
Mus musculus	RefSeq	ILMN_220536	ILMN_220536	MTRR	NM_172480.2	NM_172480.2		210009	142372988	NM_172480.2	Mtrr	NP_766068.1	ILMN_2742268	004050196	S	296	CAGCCCGGAAGTTTGTTAAAGAAATACACAACAAGACACTCCCCACGGAC	13	-	68718450-68718499	13qB3	Mus musculus 5-methyltetrahydrofolate-homocysteine methyltransferase reductase (Mtrr), mRNA.		Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISO]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence ISO]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence ISO]; Catalysis of the reaction: [methionine synthase]-cob(II)alamin + NADPH + H+ + S-adenosyl methionine = [methionine synthase]-methylcob(I)alamin + S-adenosylhomocysteine + NADP+ [goid 30586] [evidence ISO]; Catalysis of the reaction: 2 cob(II)alamin + NAD+ = 2 aquacob(III)alamin + NADH + H+ [goid 47138] [evidence ISO]	4732420G08	4732420G08
Mus musculus	RefSeq	ILMN_222361	ILMN_222361	CETN2	NM_019405.6	NM_019405.6		26370	142368991	NM_019405.6	Cetn2	NP_062278.2	ILMN_1220409	000620075	S	378	AGACTGGGAAAATATCATTCAAGAATCTTAAGCGCGTGGCCAAGGAGCTG	X	-	70160208-70160257	XqA7.3	Mus musculus centrin 2 (Cetn2), mRNA.	A 9+0 cilium that forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments [goid 32391] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a complex of G-protein beta/gamma subunits [goid 31683] [evidence IDA]	1110034A02Rik; AI326150; caltractin; Calt	1110034A02Rik; AI326150; caltractin; Calt
Mus musculus	Riken	ILMN_204709	ILMN_204709	A530051J20RIK	ri|A530051J20|PX00141K13|AK040959|1385					AK040959	A530051J20Rik		ILMN_2567041	005220544	S	133	GGAGGCGAACAGTGAAGAGAGTGAACCCAGAAGGAATCCACAAGGCTGGT										
Mus musculus	MEEBO	ILMN_219997	ILMN_219997	AW125441	scl18764.2_608	NM_178889.2			31341663	NM_178889.2	AW125441		ILMN_1222612	005670402	S	2731	GGCTCTTGCTGGGGTTGCTTAATGGAGATAGTAACAGATGAAGACAAGCC										
Mus musculus	RefSeq	ILMN_260619	ILMN_260619	SLITRK1	NM_199065.1	NM_199065.1		76965	51371940	NM_199065.1	Slitrk1	NP_951020.1	ILMN_2961282	004040672	S	1936	CGAAAGCGGTCCAAGAGAAGGGATGCCAATTCCTCTGCGTCCGAAATTAA	14	-	109310509-109310558	14qE3	Mus musculus SLIT and NTRK-like family, member 1 (Slitrk1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	3200001I04Rik	3200001I04Rik
Mus musculus	RefSeq	ILMN_210951	ILMN_210951	FPR1	NM_013521.2	NM_013521.2		14293	71361679	NM_013521.2	Fpr1	NP_038549.1	ILMN_2610944	001780482	S	587	CACAGTCCCTAATAGTAGACTTGGACCAGGGAAAACAGCCTGTACTTTCG	17	-	18014121-18014170	17qA3.2	Mus musculus formyl peptide receptor 1 (Fpr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an N-formyl peptide to initiate a change in cell activity [goid 4982] [evidence ISO]	FPR; LXA4R; fMLF-R	FPR; LXA4R; fMLF-R
Mus musculus	MEEBO	ILMN_188728	ILMN_188728	USP47	scl00320745.1_106	NM_177249.2			31343167	NM_177249.2	Usp47		ILMN_2455217	002600538	S	6	GTTTGGGGCTTAGCATAGTTGCTGTCTTAAATGTTGCAGATGGACTGTCT							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198808	ILMN_198808	LOC245128	XM_142564.3	XM_142564.3			38087872	XM_142564.3	LOC245128		ILMN_2532998	001030551	S	2903	GTGGCAACAGCTTTACCCACTGAGGCATCTTGTTGGCCCCTGTATCCCCT										
Mus musculus	MEEBO	ILMN_223952	ILMN_223952	GALNT9	scl27438.12.1_20				38142485	NM_198306	Galnt9		ILMN_1227691	002000296	S	578	AGACCCAAGAGCAATGTGGGCCCTGCACACCCCAGGGCTAGGTTTTGTGA								Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200206	ILMN_228076	LOC624610	XM_992064.1	XM_992064.1		624610	94378716	XM_992064.1	LOC624610	XP_997158.1	ILMN_2537948	006400347	S	2309	GGGCAAGGACCACAGCCAACTTCCTCTTACAAGCCACACCGACTTTGTCC					PREDICTED: Mus musculus hypothetical protein LOC624610 (LOC624610), mRNA.					
Mus musculus	MEEBO	ILMN_195375	ILMN_195375	UBA52	scl022186.3_30				9845264	NM_019883	Uba52		ILMN_2515022	002230639	S	13	GAGGTCGAGCCCAGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Mus musculus	Riken	ILMN_202382	ILMN_202382	4930532K22RIK	ri|4930532K22|PX00034J15|AK015947|746					AK015947	4930532K22Rik		ILMN_1254347	000240408	S	505	TGTGTGTACCAGGTACTTGCAGAAGGCCAGAAGTGGGCATCATCCCTGGG										
Mus musculus	RefSeq	ILMN_199066	ILMN_317488	LRRIQ1	XM_001478028.1	XM_001478028.1		74978	149261032	XM_001478028.1	Lrriq1	XP_001478078.1	ILMN_1245723	001300685	S	4219	CAGGCAGTTTGGAAGGGCTTTATTTTACGAAAGAAGCTGGCGACCGCCCG	10	-	102619043-102619090:102624343-102624344	10qD1	PREDICTED: Mus musculus leucine-rich repeats and IQ motif containing 1 (Lrriq1), mRNA.					
Mus musculus	RefSeq	ILMN_199065	ILMN_317488	LRRIQ1	XM_001478028.1	XM_001478028.1		74978	149261032	XM_001478028.1	Lrriq1	XP_001478078.1	ILMN_1256242	001090397	S	4888	CGGAGTCAGGAGTACACCTACCAGTGGCTTCATACACAAGTTGGCTTTCC	10	-	102533713-102533762	10qD1	PREDICTED: Mus musculus leucine-rich repeats and IQ motif containing 1 (Lrriq1), mRNA.					
Mus musculus	RefSeq	ILMN_213980	ILMN_317488	LRRIQ1	XM_001478028.1	XM_001478028.1		74978	149261032	XM_001478028.1	Lrriq1	XP_001478078.1	ILMN_1236426	005080050	S	862	GATGCAGCTGTAAAAATTCAAGCCACTTATAGAGCATCAGTAACTTACCG	10	-	102678597-102678646	10qD1	PREDICTED: Mus musculus leucine-rich repeats and IQ motif containing 1 (Lrriq1), mRNA.					
Mus musculus	RefSeq	ILMN_220047	ILMN_220047	C1QTNF9	NM_183175.3	NM_183175.3		239126	133892199	NM_183175.3	C1qtnf9	NP_898998.2	ILMN_2716968	005390110	S	1817	CCAGTAATGCAAGGGGTACTTTCATCACAATGCACTGCCACAGTTGCATG	14	+	61399620-61399669	14qD1	Mus musculus C1q and tumor necrosis factor related protein 9 (C1qtnf9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			9130217G22Rik; Ciqtnf9	9130217G22Rik; Ciqtnf9
Mus musculus	RefSeq	ILMN_244723	ILMN_244723	OTTMUSG00000000971	NM_001081957.1	NM_001081957.1		100034251	126432557	NM_001081957.1	OTTMUSG00000000971	NP_001075426.1	ILMN_2864309	005360370	S	47	CCACAGTCTTGTTTCTGGTGGCTTTGATCACTGTGGGGATGAACACTACC	11	+	83517604-83517653	11qC	Mus musculus predicted gene, OTTMUSG00000000971 (OTTMUSG00000000971), mRNA.				RP23-430I21.1	RP23-430I21.1
Mus musculus	MEEBO	ILMN_195193	ILMN_195193	PCDH20	scl45254.2_166				32129230	NM_178685	Pcdh20		ILMN_1237302	000110347	S	3859	TTCGCTGGTCAGCAGCAAGTTTTCCGTGGGTTTTATGTTAGCGTGGGTCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195193	ILMN_195193	PCDH20	scl45254.2_166				32129230	NM_178685	Pcdh20		ILMN_1224947	003870603	S	13	GTGAGTGTTCCCTCACATCCCAGCAACCTCTGTGCTTATTGTGTTTCACT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221427	ILMN_221427	DCTN3	NM_016890.2	NM_016890.2		53598	31980820	NM_016890.2	Dctn3	NP_058586.2	ILMN_2805029	003130372	S	506	TGCTTCTCTCCAAGCAGTTTGTGCAGTGGGATGAGTTACTCTGCCAGCTA	4	-	41903873-41903922	4qA5	Mus musculus dynactin 3 (Dctn3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p24	p24
Mus musculus	RefSeq	ILMN_211440	ILMN_211440	CHAC2	NM_026527.2	NM_026527.2		68044	114205429	NM_026527.2	Chac2	NP_080803.1	ILMN_2615920	002760671	S	826	GTGTCCTGAAACATATCCAACAGATTCTCACAATGGGAAAGAGTTCACGT	11	-	30877161-30877210	11qA4	Mus musculus ChaC, cation transport regulator homolog 2 (E. coli) (Chac2), mRNA.				RP23-20N14.6; 2510006C20Rik	RP23-20N14.6; 2510006C20Rik
Mus musculus	MEEBO	ILMN_210976	ILMN_210976	EIF4G2	scl000210.1_44	NM_013507.2			34486093	NM_013507.2	Eif4g2		ILMN_1213167	006520484	S	1672	CCAGCTACAAGGACAGTCGAAGGATATGCCACCTCGGTTTTCTAAGAAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IDA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210814	ILMN_210814	GORASP2	NM_027352.2	NM_027352.2		70231	31980644	NM_027352.2	Gorasp2	NP_081628.2	ILMN_2884098	005050162	S	1944	CTGTTGGTCTCTGTGAGTCGCATCTCTATTACGGTTTACACAAAACTCCC	2	+	70492288-70492337	2qC2	Mus musculus golgi reassembly stacking protein 2 (Gorasp2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9430094F20Rik; p59; AW552058; 2410043M02Rik; 5730520M13Rik; 0610011A07Rik; GRS2; GRASP55; GOLPH2	9430094F20Rik; p59; AW552058; 2410043M02Rik; 5730520M13Rik; 0610011A07Rik; GRS2; GRASP55; GOLPH2
Mus musculus	Riken	ILMN_202096	ILMN_202096	2700078K21RIK	ri|2700078K21|ZX00064I19|AK012535|960					AK012535	2700078K21Rik		ILMN_1227922	002000634	S	1	ATTCGAGTGTTTACTTCCGGCCGCCGGCGGGGCTGAGGCCGAGCGAGGCG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218559	ILMN_218559	HR	NM_021877.2	NM_021877.2		15460	31544071	NM_021877.2	Hr	NP_068677.2	ILMN_1220617	006980671	S	5194	ATCCCAACTCCTCTTAGTGTCCAAGCCCCCAGGACAGAGCCTCACTGCCT	14	+	70973062-70973111	14qD2	Mus musculus hairless (Hr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	rh-bmh; AU; bldy; ba; N; rh; rhino; ALUNC	rh-bmh; AU; bldy; ba; N; rh; rhino; ALUNC
Mus musculus	RefSeq	ILMN_218559	ILMN_218559	HR	NM_021877.2	NM_021877.2		15460	31544071	NM_021877.2	Hr	NP_068677.2	ILMN_2800687	006330605	S	5398	CACGTGCGCCAGCTCTTGTTATACTTAACAGTTCCTGCTGTGGTTTGGGG	14	+	70973266-70973315	14qD2	Mus musculus hairless (Hr), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	rh-bmh; AU; bldy; ba; N; rh; rhino; ALUNC	rh-bmh; AU; bldy; ba; N; rh; rhino; ALUNC
Mus musculus	RefSeq	ILMN_194377	ILMN_310797	LOC672215	XM_001479987.1	XM_001479987.1		672215	149262170	XM_001479987.1	LOC672215	XP_001480037.1	ILMN_1239673	002100050	S	2195	AGCCTGGTGATCCAGTGGCGGGACACATGGGCACGGCGGCTGCGCAAGTT					PREDICTED: Mus musculus similar to netrin 1 (LOC672215), mRNA.					
Mus musculus	RefSeq	ILMN_216680	ILMN_216680	ART4	NM_026639.2	NM_026639.2		109978	142374158	NM_026639.2	Art4	NP_080915.1	ILMN_1219298	004180465	S	2021	CAGTGAAGACACCCAAGGATACCACTTGCCCATTACTTGGCCAGAGATCC	6	-	136797285-136797334	6qG1	Mus musculus ADP-ribosyltransferase 4 (Art4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DOK1; 4432404K01Rik; DO	DOK1; 4432404K01Rik; DO
Mus musculus	Riken	ILMN_207418	ILMN_207418	F630107L03RIK	ri|F630107L03|PL00015L17|AK089261|2177					AK089261	F630107L03Rik		ILMN_1257653	006250411	S	1865	CTACTGTTGGCTGTGGGCTATGAGTGACAATGGTGTGTCAGTGAAGGGCC										
Mus musculus	RefSeq	ILMN_221789	ILMN_221789	A130023I24RIK	NM_177194.2	NM_177194.2		320569	31343033	NM_177194.2	A130023I24Rik	NP_796168.1	ILMN_2844969	001740468	S	1654	GAGCTGTCTCAAGTTCCATCAATAGGTCAAGCTGCCCACACTGGAGAGGC	7	-	141419892-141419941	7qF3	Mus musculus RIKEN cDNA A130023I24 gene (A130023I24Rik), mRNA.					
Mus musculus	Riken	ILMN_204191	ILMN_204191	HSPA4	ri|C730032B14|PX00087C04|AK050271|2898					AK050271	Hspa4		ILMN_1242522	003420609	S	2625	TGCCTTCCAGTATTGGCCTAGCCCTGGGAATGCTCACTTACTCATTGGGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196884	ILMN_241603	NPBWR1	XM_912251.2	XM_912251.2		226304	94363098	XM_912251.2	Npbwr1	XP_917344.1	ILMN_1241373	003460524	S	937	ACCACCGACCTCCCGCAAACGCCGCTGGTCATCGGCATCTCTTACTTCAT				1qA1	PREDICTED: Mus musculus neuropeptides B/W receptor 1 (Npbwr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216540	ILMN_216540	FHOD3	NM_175276.3	NM_175276.3		225288	37674239	NM_175276.3	Fhod3	NP_780485.2	ILMN_2672221	005870273	S	5202	CAGTTGTTAAGATAACATGGGGCAATGTGATTAGACTCAGAGACTGGGTC	18	+	25291795-25291844	18qA2	Mus musculus formin homology 2 domain containing 3 (Fhod3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	A930009H06Rik; KIAA1695; FHOS2; mKIAA1695	A930009H06Rik; KIAA1695; FHOS2; mKIAA1695
Mus musculus	Riken	ILMN_206190	ILMN_206190	MMP19	ri|A530065E22|PX00142B05|AK080125|1794					AK080125	Mmp19		ILMN_1250461	003610343	S	1209	GGGGCCCAACTTCTACAGTTTGGATCAGCTTCTGGAGTCCCCTAAGTTCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190287	ILMN_228441	OSBPL9	NM_173350.1	NM_173350.1		100273	27597099	NM_173350.1	Osbpl9	NP_775485.1	ILMN_1215004	003420746	S	2198	GACAGTTCCAGGTCTCAGCTTCCTGTCCTCTAGTTCTGCTGTTCGGGCAT	4	-	108734533-108734582	4qC7	Mus musculus oxysterol binding protein-like 9 (Osbpl9), transcript variant 2, mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]		AU015843; MGC30367; ORP-9; MGC38458; 2600011I06Rik	AU015843; MGC30367; ORP-9; MGC38458; 2600011I06Rik
Mus musculus	RefSeq	ILMN_221613	ILMN_221613	HNF4G	NM_013920.1	NM_013920.1		30942	7305146	NM_013920.1	Hnf4g	NP_038948.1	ILMN_1239947	004890136	S	1407	CCTTCCCCACCACAAGGCTCTGGACAAGAACCGTACAAAATTACTGCAAA	3	+	3657099-3657148	3qA1	Mus musculus hepatocyte nuclear factor 4, gamma (Hnf4g), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	NR2A2	NR2A2
Mus musculus	RefSeq	ILMN_238154	ILMN_238154	KRT74	NM_001003669.1	NM_001003669.1		406222	51092294	NM_001003669.1	Krt74	NP_001003669.1	ILMN_3161215	006040181	S	1302	CAGTTGTGGGTCCTGTGGTTATCATCCAAGCTCCATGATCTCTGACTCTG	15	-	101584919-101584968	15qF2	Mus musculus keratin 74 (Krt74), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			Kb37	Kb37
Mus musculus	RefSeq	ILMN_198453	ILMN_198453	LOC329076	XM_282724.2	XM_282724.2			38085208	XM_282724.2	LOC329076		ILMN_2531741	006380039	S	1113	ATATGAGTCGTATACATGGCGGAAACTGGATCCTGGGAGCGAGGAGACCC										
Mus musculus	RefSeq	ILMN_218870	ILMN_218870	PDCD10	NM_019745.2	NM_019745.2		56426	31560390	NM_019745.2	Pdcd10	NP_062719.2	ILMN_2806851	005900615	S	1537	GTAACACTTCAGGTTCATGACGCTTTCTGAGTGGTAGATGCGGCTCCACG	3	-	75602699-75602748	3qE3	Mus musculus programmed cell death 10 (Pdcd10), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Tfar15; Tfa15; 2410003B13Rik; MGC102058	Tfar15; Tfa15; 2410003B13Rik; MGC102058
Mus musculus	RefSeq	ILMN_209588	ILMN_209588	TMPRSS11E	NM_172880.2	NM_172880.2		243084	141802965	NM_172880.2	Tmprss11e	NP_766468.1	ILMN_2597245	004120324	S	2912	TATAAGACTATTAAAATTAGATTACTTTCAGAGACTTGTTAGAAAGTGAT	5	-	87134657-87134706	5qE1	Mus musculus transmembrane protease, serine 11e (Tmprss11e), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	TTSP; AY787860; A030012E10; DESC1	TTSP; AY787860; A030012E10; DESC1
Mus musculus	RefSeq	ILMN_223648	ILMN_223648	PNMT	NM_008890.1	NM_008890.1		18948	6679404	NM_008890.1	Pnmt	NP_032916.1	ILMN_1238777	007320221	S	587	AGGCTGTGAGCCCAGATCTTACTAGCTTCCAGCGGGCTTTGCATCACATC	11	+	98249110-98249159	11qD	Mus musculus phenylethanolamine-N-methyltransferase (Pnmt), mRNA.		The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 42423] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + phenylethanolamine = S-adenosyl-L-homocysteine + N-methylphenylethanolamine [goid 4603] [evidence IEA]	Pent	Pent
Mus musculus	RefSeq	ILMN_213871	ILMN_213871	FEM1C	NM_173423.3	NM_173423.3		240263	146198869	NM_173423.3	Fem1c	NP_775599.1	ILMN_2641669	004200296	S	2463	CACCAGCATCCATTAGCTTGATATCATTGCTCCCATTGGCTAAAGCATTG				18qC	Mus musculus fem-1 homolog c (C.elegans) (Fem1c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		2610312A07Rik; AI646567; 3632443A22Rik	2610312A07Rik; AI646567; 3632443A22Rik
Mus musculus	RefSeq	ILMN_213871	ILMN_213871	FEM1C	NM_173423.3	NM_173423.3		240263	146198869	NM_173423.3	Fem1c	NP_775599.1	ILMN_2724409	005290639	S	2288	ACCACATTGCAGTGTCTTGCTGCTCGTGTCATCGTGAATCATAGAATCTA				18qC	Mus musculus fem-1 homolog c (C.elegans) (Fem1c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		2610312A07Rik; AI646567; 3632443A22Rik	2610312A07Rik; AI646567; 3632443A22Rik
Mus musculus	MEEBO	ILMN_217067	ILMN_217067	2300004C15RIK	scl36894.13.1_20	XM_147000.1			20891122	XM_147000.1	2300004C15Rik		ILMN_2678745	002230546	S	1032	TTGCGTGACATGGGCATCCAGGATGACGAACTAAGCCTCCGGGCCCTACA										
Mus musculus	RefSeq	ILMN_219898	ILMN_237867	RFWD3	NM_146218.4	NM_146218.4		234736	146149312	NM_146218.4	Rfwd3	NP_666330.2	ILMN_2723997	004250048	S	1942	GAGCCAGGGGGCTTTGTAGACTTTCAGACAGAGAGCAGCACCCGACACTG				8qE1	Mus musculus ring finger and WD repeat domain 3 (Rfwd3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC027246; MGC27888	BC027246; MGC27888
Mus musculus	RefSeq	ILMN_190200	ILMN_225088	BHMT	NM_016668.3	NM_016668.3		12116	74325340	NM_016668.3	Bhmt	NP_057877.1	ILMN_2620994	002480039	S	1982	ACCACAAAGAAGAAACAATGGACTGCTATTCTGTCTGCTTCTATTCCATT	13	-	94386885-94386934	13qC3	Mus musculus betaine-homocysteine methyltransferase (Bhmt), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IDA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: homocysteine + betaine = L-methionine + dimethylglycine [goid 47150] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine [goid 8898] [evidence IDA]	MGC117976; MGC46866	MGC117976; MGC46866
Mus musculus	RefSeq	ILMN_235950	ILMN_235950	EIF4E2	NM_001039169.1	NM_001039169.1		26987	85677507	NM_001039169.1	Eif4e2	NP_001034258.1	ILMN_3065816	005810762	I	495	TTGTCTTCTGCAAGCGGGGACGGTAACAGAGCCCGTGTCGTAGAGTTGGG	1	+	89111008-89111057	1qD	Mus musculus eukaryotic translation initiation factor 4E member 2 (Eif4e2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D0H0S6743E; Eif4el3; 2700069E09Rik; AV129531; AI036339	D0H0S6743E; Eif4el3; 2700069E09Rik; AV129531; AI036339
Mus musculus	RefSeq	ILMN_210228	ILMN_260630	4933402D24RIK	XM_909015.2	XM_909015.2		74426	94363655	XM_909015.2	4933402D24Rik	XP_914108.1	ILMN_1226803	001500161	S	1676	GAGTGAGACTGAGCCTCTCACTAACGGTTTGGGATATAAAATTCCTTGGA				1qC2	PREDICTED: Mus musculus RIKEN cDNA 4933402D24 gene (4933402D24Rik), mRNA.					
Mus musculus	Riken	ILMN_203432	ILMN_203432	C430014G13RIK	ri|C430014G13|PX00078L02|AK049453|1079					AK049453	C430014G13Rik		ILMN_1214706	005670142	S	914	GGTACGCCATCCCAAAACATGTGATGTGTGTGCAAGAAGCTGGCGCAGGC										
Mus musculus	RefSeq	ILMN_201338	ILMN_201338	LARP1	XM_126172.8	XM_126172.8		73158	149261893	XM_126172.8	Larp1	XP_126172.6	ILMN_2759884	006860619	S	6381	GAGTTGATGTTGCGGAGTAGTTTACATCTTCACCTTCTGAAGACACTTGA	11	+	57874628-57874677	11qB1.3	PREDICTED: Mus musculus La ribonucleoprotein domain family, member 1 (Larp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_201319	ILMN_201319	LOC382429	XM_356503.1	XM_356503.1			38090796	XM_356503.1	LOC382429		ILMN_2541877	006450224	S	490	ATCTGTAGTCAGATGCCCTGCTGGAGTTTGAGGTGTGGTAGGCCGCCTGA										
Mus musculus	RefSeq	ILMN_225288	ILMN_225288	OLFR1290	NM_146765.1	NM_146765.1		258761	49170051	NM_146765.1	Olfr1290	NP_666976.1	ILMN_2975408	003890092	S	669	AGCTGGTGCATCTAAGGCAATGAACACATGCACTGCCCACATTACAGTGG					Mus musculus olfactory receptor 1290 (Olfr1290), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR248-9	MOR248-9
Mus musculus	RefSeq	ILMN_209065	ILMN_209065	GFOD2	NM_027469.3	NM_027469.3		70575	146141104	NM_027469.3	Gfod2	NP_081745.1	ILMN_1236845	000520292	S	1893	CAGCCCCCTTGCAAGCCCTTCCAAGAGAAAAGGAGGTTTCTGTGTTATAC				8qD3	Mus musculus glucose-fructose oxidoreductase domain containing 2 (Gfod2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	5730466C23Rik	5730466C23Rik
Mus musculus	MEEBO	ILMN_187004	ILMN_187004	2610030H06RIK	scl0067048.1_329				51772599	XM_110750	2610030H06Rik		ILMN_2521738	007050674	S	19	TTGATTAGAACAACCCTGCGCCTGAAAAAAAGCCCAGTTCCCTTGGTACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_198443	ILMN_242913	E030044B06RIK	XM_923727.2	XM_923727.2		381223	94406260	XM_923727.2	E030044B06Rik	XP_928820.2	ILMN_1244796	002630241	S	675	GTACACACAACACCCTGGCACAGCTAAGGGATGCTTCAGAGGAGCCTGCC				19qC3	PREDICTED: Mus musculus RIKEN cDNA E030044B06 gene (E030044B06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_217916	ILMN_217916	ATL1	NM_178628.4	NM_178628.4		73991	142348381	NM_178628.4	Atl1	NP_848743.1	ILMN_2732594	007050075	S	2522	ACACCACAAATGTATTCTTCATAGGTTTATTCTTTTAATATGTGAACTAT	12	+	71064940-71064989	12qC2	Mus musculus atlastin GTPase 1 (Atl1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	SPG3; FSP1; AD-FSP; 4930435M24Rik	SPG3; FSP1; AD-FSP; 4930435M24Rik
Mus musculus	RefSeq	ILMN_217916	ILMN_217916	ATL1	NM_178628.4	NM_178628.4		73991	142348381	NM_178628.4	Atl1	NP_848743.1	ILMN_2689284	000060653	S	2234	GATATGCTCATTTGATTTCTATAGAAAATTTAAGTTATTTTACATAGCTA	12	+	71064652-71064701	12qC2	Mus musculus atlastin GTPase 1 (Atl1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	SPG3; FSP1; AD-FSP; 4930435M24Rik	SPG3; FSP1; AD-FSP; 4930435M24Rik
Mus musculus	RefSeq	ILMN_196120	ILMN_254035	STK33	XM_910887.2	XM_910887.2		117229	94381183	XM_910887.2	Stk33	XP_915980.1	ILMN_2641890	001470021	S	1891	GGCTAAAACCACTCTGAAATCCACTACCTTGTTTCGAGGCAAGAAAAGGC				7qE3	PREDICTED: Mus musculus serine/threonine kinase 33 (Stk33), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201017	ILMN_315559	LOC100042290	XR_033106.1	XR_033106.1		100042290	149273271	XR_033106.1	LOC100042290		ILMN_1228621	007050747	S	572	GTCAACTGGAGGGGGGTGGTGCTAGCCCAGGTGCCAACCATGAAGGATTT	Y|NT_166352.1	-	174070-174119		PREDICTED: Mus musculus similar to spermiogenesis specific transcript on the Y 1 (LOC100042290), misc RNA.					
Mus musculus	RefSeq	ILMN_199956	ILMN_199956	LOC386473	XM_359310.1	XM_359310.1			38079207	XM_359310.1	LOC386473		ILMN_1235220	001450204	S	1258	GATGAGCTATACCCTGCCCCTCAGGAGTGCTATGATAACAGGGATGTAGC										
Mus musculus	RefSeq	ILMN_214762	ILMN_214762	NACA	NM_013608.2	NM_013608.2		17938	41350311	NM_013608.2	Naca	NP_038636.2	ILMN_2651642	005290086	S	32	CTTCCTTCTGCAACAGGCGTGGGTCACGGGCTCGCTCGTTCTCTTTCTGC	10	+	127472660-127472709	10qD3	Mus musculus nascent polypeptide-associated complex alpha polypeptide (Naca), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with TATA-binding protein (TBP), a component of various transcription factors [goid 17025] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]	mKIAA0363; AL022831; Gm1878; AL024382; skNAC	mKIAA0363; AL022831; Gm1878; AL024382; skNAC
Mus musculus	RefSeq	ILMN_214762	ILMN_214762	NACA	NM_013608.2	NM_013608.2		17938	41350311	NM_013608.2	Naca	NP_038636.2	ILMN_2651643	005670291	S	34	TTCCTTCTGCAACAGGCGTGGGTCACGGGCTCGCTCGTTCTCTTTCTGCC	10	+	127472662-127472711	10qD3	Mus musculus nascent polypeptide-associated complex alpha polypeptide (Naca), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with TATA-binding protein (TBP), a component of various transcription factors [goid 17025] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]	mKIAA0363; AL022831; Gm1878; AL024382; skNAC	mKIAA0363; AL022831; Gm1878; AL024382; skNAC
Mus musculus	RefSeq	ILMN_214762	ILMN_214762	NACA	NM_013608.2	NM_013608.2		17938	41350311	NM_013608.2	Naca	NP_038636.2	ILMN_2955104	005700603	S	659	ACTGGTCATGTCGCAAGCAAACGTATCAAGAGCAAAGGCTGTTCGAGCCC	10	+	127485336-127485385	10qD3	Mus musculus nascent polypeptide-associated complex alpha polypeptide (Naca), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with TATA-binding protein (TBP), a component of various transcription factors [goid 17025] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]	mKIAA0363; AL022831; Gm1878; AL024382; skNAC	mKIAA0363; AL022831; Gm1878; AL024382; skNAC
Mus musculus	RefSeq	ILMN_241352	ILMN_241352	MAX	NM_008558.1	NM_008558.1		17187	6678815	NM_008558.1	Max	NP_032584.1	ILMN_3068231	002570132	I	142	GCTCCCTGGGCCGTAGGAAATGAGCGATAACGATGACATCGAGGTGGAGA	12	-	78062981-78063012:78063013-78063030	12qC3	Mus musculus Max protein (Max), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AI875693; AA960152	AI875693; AA960152
Mus musculus	RefSeq	ILMN_201509	ILMN_201509	LOC385279	XM_358166.1	XM_358166.1			38095894	XM_358166.1	LOC385279		ILMN_1238368	003130692	S	612	CTGGATGTCCATGTCAACCACTGCTGCCCTCTACAGACAGGATCGAGCTG										
Mus musculus	MEEBO	ILMN_210424	ILMN_210424	PCDHGA7	scl093715.1_43	NM_033590.1			18087764	NM_033590.1	Pcdhga7		ILMN_1252556	005290184	S	2288	TGCAGACTCTCGAAAAAGCCACATTATCTTCCCTCAGCCCAATTACGTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214465	ILMN_214465	SGCE	NM_011360.2	NM_011360.2		20392	31981493	NM_011360.2	Sgce	NP_035490.2	ILMN_2648265	002750349	S	1516	GCATTTTTGAAAATTTATAAGACATCAACGACTTTATATTTGTTACAATA	6	-	4624375-4624424	6qA1	Mus musculus sarcoglycan, epsilon (Sgce), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	e-SG	e-SG
Mus musculus	Riken	ILMN_206098	ILMN_206098	GAD1	ri|E530004P22|PX00319K01|AK054554|3598					AK054554	Gad1		ILMN_1231642	005870086	S	3507	GCCTGTGAAGCCAACACTTAGAAAATGAGGGTGAGATCAAGAAGACCCCC						The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2 [goid 4351] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198992	ILMN_198992	LOC380629	XM_354533.1	XM_354533.1			38090374	XM_354533.1	LOC380629		ILMN_2533662	004490471	S	1323	CATGCATCTGTATGCAGTGTGTGTGGACTGCCTGGAAGGGGTTCACAAGA										
Mus musculus	RefSeq	ILMN_215084	ILMN_215084	OLFR1020	NM_146580.1	NM_146580.1		258573	22129488	NM_146580.1	Olfr1020	NP_666791.1	ILMN_2655345	006060484	S	894	TTTAAAAAATAAAGATGTTAAGAAAGCAGTGAAGAAAATCTTACATAATT	2	+	85690504-85690553	2qD	Mus musculus olfactory receptor 1020 (Olfr1020), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR201-2	MOR201-2
Mus musculus	MEEBO	ILMN_211816	ILMN_211816	PEBP2AB	scl0001771.1_21				220332	D13802	PEBP2aB		ILMN_2619773	004120296	S	807	ATCAGACCAAGCCCGGGAGTTTGTCCTTTTCCGAGCGGCTCAGTGAATTG										
Mus musculus	RefSeq	ILMN_219445	ILMN_219445	BC005764	NM_181681.1	NM_181681.1		216152	32129206	NM_181681.1	BC005764	NP_859009.1	ILMN_2709001	007510553	S	2691	AGCCTGGCAAAACTGTGATGGGGATTAGGGGAGCTGGGGGTGTCTACAGC	10	-	79327551-79327600	10qC1	Mus musculus cDNA sequence BC005764 (BC005764), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]	Prg2; mKIAA4076; KIAA4076	Prg2; mKIAA4076; KIAA4076
Mus musculus	RefSeq	ILMN_209890	ILMN_209890	RNF4	NM_011278.1	NM_011278.1		19822	33859619	NM_011278.1	Rnf4	NP_035408.1	ILMN_1240883	002350187	S	1991	TGAGCTTTGATCCTCTGGACTTTTGACCTGCTCAGTGGGTTTTGGTCAGC	5	+	34669342-34669391	5qB2	Mus musculus ring finger protein 4 (Rnf4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AU018689	AU018689
Mus musculus	RefSeq	ILMN_194993	ILMN_246266	WDR27	NM_175173.3	NM_175173.3		71682	116089309	NM_175173.3	Wdr27	NP_780382.2	ILMN_1217710	004890082	S	2368	AGCCACCTTAGACGGGAAACTTCAGCTATTTGTGGCTGAGTGATGACCGT	17	-	14966529-14966568:14966569-14966578	17qA2	Mus musculus WD repeat domain 27 (Wdr27), mRNA.				0610012K18Rik	0610012K18Rik
Mus musculus	Riken	ILMN_204723	ILMN_204723	B930001L07RIK	ri|B930001L07|PX00162H24|AK046898|3041					AK046898	B930001L07Rik		ILMN_2567145	004880228	S	2912	GTGTAGAGAAAAGGAAGAGGCAAGAAGACAGGTGGGTGAAGACCTCTCCC										
Mus musculus	MEEBO	ILMN_184284	ILMN_184284	IGF2BP1	scl39677.17_232				31560605	NM_009951	Igf2bp1		ILMN_2595622	004290192	S	2681	ATCCACGTTTAAAGGGAGTCCTTGGGCTAAGGATAGAGCTCGCCGGGCAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184284	ILMN_184284	IGF2BP1	scl39677.17_232				31560605	NM_009951	Igf2bp1		ILMN_2595621	007570615	S	2680	GATCCACGTTTAAAGGGAGTCCTTGGGCTAAGGATAGAGCTCGCCGGGCA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213207	ILMN_213207	EPHB3	NM_010143.1	NM_010143.1		13845	33859547	NM_010143.1	Ephb3	NP_034273.1	ILMN_1213216	002120068	S	3726	TGACCCCACCAGGTAAGCAGAGAGTACTCCCTCCCCCAGGAAGTGGAGGA	16	+	21222958-21223007	16qB1	Mus musculus Eph receptor B3 (Ephb3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA];  [goid 8046] [evidence IDA];  [goid 5005] [evidence TAS]	Cek10; AW456895; Etk2; HEK2; Tyro6; MDK5; Sek4	Cek10; AW456895; Etk2; HEK2; Tyro6; MDK5; Sek4
Mus musculus	Riken	ILMN_201809	ILMN_201809	2600006K01RIK	ri|2600006K01|ZX00060O18|AK011165|872					AK011165	2600006K01Rik		ILMN_2544758	007210008	S	592	ACCTCGCATCACCTCCGCAGGCTCCGGCCCTTAAAGCAAAGCCCTTCTTT										
Mus musculus	MEEBO	ILMN_208779	ILMN_208779	COL6A1	scl37795.5.1_59	NM_009933.1			6753483	NM_009933.1	Col6a1		ILMN_2589422	007040053	S	788	AGCCGCGATGCAGAAGAGGTCATCAGCCAGACCATTGACACCATTGTGGA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]		
Mus musculus	RefSeq	ILMN_198595	ILMN_311351	EG631922	XM_001473355.1	XM_001473355.1		631922	149271648	XM_001473355.1	EG631922	XP_001473405.1	ILMN_1237005	007320600	S	429	CAGCGCCTCGGTGACCATGTGTGACATGAGTCTGCCTGACCTGGACAGTA	X	-	58160146-58160195	XqA6	PREDICTED: Mus musculus predicted gene, EG631922 (EG631922), mRNA.					
Mus musculus	RefSeq	ILMN_218633	ILMN_218633	4930486L24RIK	NM_178098.2	NM_178098.2		214639	31342510	NM_178098.2	4930486L24Rik	NP_835199.1	ILMN_2698334	000940129	S	938	GTTCTGGTGGTCGGCTATGGTTTTGAGGGAGAAGAATCAGATGGCAACAG	13	-	60945690-60945739	13qB2	Mus musculus RIKEN cDNA 4930486L24 gene (4930486L24Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	AW545031	AW545031
Mus musculus	Riken	ILMN_204962	ILMN_204962	E130012G03RIK	ri|E130012G03|PX00208E06|AK053371|2988					AK053371	E130012G03Rik		ILMN_1215591	002760019	S	2689	GGGAGCTGAGACCAAGATGTTTCAGCTAACCTTCTTCTGGAAGCTCTTCC										
Mus musculus	Riken	ILMN_205131	ILMN_205131	SOAT1	ri|E230023O14|PX00209P11|AK054149|1953					AK054149	Soat1		ILMN_1221350	006520553	S	1624	TTGATGGGGCCTCGCGTTGTCTGGCTCTGGGATGACGTTGTGTCCTGTAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence ISO]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + a sterol = CoA + a sterol ester [goid 4772] [evidence IDA]; Catalysis of the reaction: acyl-CoA + a sterol = CoA + a sterol ester [goid 4772] [evidence ISO]		
Mus musculus	RefSeq	ILMN_231586	ILMN_231586	SYNE1	NM_022027.2	NM_022027.2		64009	119120815	NM_022027.2	Syne1	NP_071310.2	ILMN_3017615	000770242	I	182	ACTTGCATGGCCCGAGGATGGCAGAGGACAGCAGTGTGGATGCAGATCTC	10	+	5277659-5277708	10qA1	Mus musculus synaptic nuclear envelope 1 (Syne1), transcript variant 2, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1	KIAA1756; 8B; CPG2; C130039F11Rik; mKIAA1756; MGC62825; A330049M09Rik; BE692247; Myne1
Mus musculus	RefSeq	ILMN_211103	ILMN_211103	METTL1	NM_010792.1	NM_010792.1		17299	6754681	NM_010792.1	Mettl1	NP_034922.1	ILMN_3001946	005310463	S	491	GGCAAAGATGTTCTTCCTCTTCCCGGACCCACACTTTAAGCGAACGAAGC	10	+	126481814-126481863	10qD3	Mus musculus methyltransferase-like 1 (Mettl1), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N7-methylguanine [goid 8176] [evidence IEA]	2810012D02Rik	2810012D02Rik
Mus musculus	RefSeq	ILMN_211103	ILMN_211103	METTL1	NM_010792.1	NM_010792.1		17299	6754681	NM_010792.1	Mettl1	NP_034922.1	ILMN_2732419	001070653	S	431	CGCCTGTCTCCGAAGTAACGCCATGAAACACCTTCCTAATTTCTTCCGCA	10	+	126481650-126481699	10qD3	Mus musculus methyltransferase-like 1 (Mettl1), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N7-methylguanine [goid 8176] [evidence IEA]	2810012D02Rik	2810012D02Rik
Mus musculus	RefSeq	ILMN_211103	ILMN_211103	METTL1	NM_010792.1	NM_010792.1		17299	6754681	NM_010792.1	Mettl1	NP_034922.1	ILMN_1240222	002760598	S	206	AAATAAGAGCCATGATGATCCAAAGGATGAGAAAGAAAAGCACTCTGGGG	10	+	126480182-126480231	10qD3	Mus musculus methyltransferase-like 1 (Mettl1), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N7-methylguanine [goid 8176] [evidence IEA]	2810012D02Rik	2810012D02Rik
Mus musculus	RefSeq	ILMN_232453	ILMN_232453	MN1	NM_001081235.1	NM_001081235.1		433938	124486984	NM_001081235.1	Mn1	NP_001074704.1	ILMN_3128529	005670390	A	3855	CTCCAACCGATTTGGGACATTTGTGGCCGCCCTGACTTGAGCCCACGGGA	5	+	111883772-111883811:111883812-111883821	5qF	Mus musculus meningioma 1 (Mn1), mRNA.		The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed [goid 1957] [evidence IMP]		AA003644; AA009236	AA003644; AA009236
Mus musculus	MEEBO	ILMN_194559	ILMN_194559	REX2	scl019715.1_89				21743781	NM_009051	Rex2		ILMN_2729479	003940537	S	1091	TCCGCGACCTGCAGTCAAGTTGGGGTAATCATGGTCATAGTGTTTCCGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222079	ILMN_222079	FOXD4	NM_008022.1	NM_008022.1		14237	6679840	NM_008022.1	Foxd4	NP_032048.1	ILMN_2744317	005090424	S	2201	GGCGACTGCGACTGCGAATGCGTACATGCTCCGAAACCCGTAGGTAATAC	19	-	24973549-24973598	19qB	Mus musculus forkhead box D4 (Foxd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	FREAC5; Fkh2	FREAC5; Fkh2
Mus musculus	RefSeq	ILMN_216295	ILMN_216295	OXT	NM_011025.3	NM_011025.3		18429	142359854	NM_011025.3	Oxt	NP_035155.1	ILMN_2669486	000360132	S	62	TGCCTGCTTGGCTTACTGGCTCTGACCTCGGCCTGCTACATCCAGAACTG	2	+	130401970-130402019	2qF1	Mus musculus oxytocin (Oxt), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA];  [goid 5185] [evidence IEA]	Oxy; OT	Oxy; OT
Mus musculus	RefSeq	ILMN_197182	ILMN_313487	LOC637277	XM_001472337.1	XM_001472337.1		637277	149264186	XM_001472337.1	LOC637277	XP_001472387.1	ILMN_1231299	000650523	S	1382	CTCGCTGCTTTAATGTCCAGACGGTGCCTGGTGTGAGTAAAGGGAGCCTG	13	+	41241990-41242039	13qA3.3	PREDICTED: Mus musculus similar to 145 kDa nucleolar protein (LOC637277), mRNA.					
Mus musculus	RefSeq	ILMN_209216	ILMN_209216	KLF4	NM_010637.2	NM_010637.2		16600	142369926	NM_010637.2	Klf4	NP_034767.1	ILMN_1241903	001170750	S	1674	TGCAGTCACAAGTCCCCTCTCTCCATTATCAAGAGCTCATGCCACCGGGT	4	-	55542737-55542754:55542871-55542902	4qB3	Mus musculus Kruppel-like factor 4 (gut) (Klf4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epidermal cell, any of the cells making up the epidermis [goid 9913] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The process by which the anatomical structures of the epidermis are generated and organized. Morphogenesis pertains to the creation of form. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 48730] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IDA]; The process occurring during the post-embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31077] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Gklf; EZF; Zie	Gklf; EZF; Zie
Mus musculus	RefSeq	ILMN_259762	ILMN_259762	ECM2	NM_001012324.2	NM_001012324.2		407800	141802059	NM_001012324.2	Ecm2	NP_001012324.1	ILMN_3160764	005050707	S	3365	CCTGGCACTTAACCAGGTGCAAGGATTAAAGGCATGTGCAATCTTTGATC	13	+	49627927-49627976	13qA5	Mus musculus extracellular matrix protein 2, female organ and adipocyte specific (Ecm2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC107322; 9030618O22Rik; BC065151	MGC107322; 9030618O22Rik; BC065151
Mus musculus	Riken	ILMN_205495	ILMN_205495	ATP2B2	ri|D130029C05|PX00183D23|AK051287|3462					AK051287	Atp2b2		ILMN_1224819	004060397	S	3117	GGCCTTGCCCGTAGATCAGCAGCACGTAGTTGGAGTAGACCCCTGCATAC						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate [goid 46068] [evidence IMP]; The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42428] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The precipitation of specific crystal forms of calcium carbonate with extracellular matrix proteins in the otolith organs of the vertebrate inner ear [goid 45299] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IGI]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the size of a cell [goid 8361] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IMP]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The process by which the anatomical structure of the cerebellar Purkinje cell layer is generated and organized. Morphogenesis pertains to the creation of form. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21692] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51928] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of calcium ion (Ca2+) [goid 30899] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of calcium (Ca) ions from one side of a membrane to the other [goid 15085] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]		
Mus musculus	MEEBO	ILMN_208819	ILMN_208819	2410004N11RIK	scl066989.6_1	NM_025888.2			31981148	NM_025888.2	2410004N11Rik		ILMN_2629165	003800328	S	2529	CTGTCCTGTGTAATGCTCAGGTGTGAGCACGGTCCTTTCTTTGTCCTTCG										
Mus musculus	RefSeq	ILMN_201577	ILMN_236808	PNMA1	NM_027438.3	NM_027438.3		70481	148287012	NM_027438.3	Pnma1	NP_081714.2	ILMN_2670951	006860100	S	2176	GCCTTTACCGAGCTGCACAATCAGTTCCTCACGGTGGAAGACAGAAGTCC				12qD1	Mus musculus paraneoplastic antigen MA1 (Pnma1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			5730402C15Rik; MGC144789; MGC144790	5730402C15Rik; MGC144789; MGC144790
Mus musculus	RefSeq	ILMN_193740	ILMN_229225	ERGIC2	NM_026168.3	NM_026168.3		67456	142366567	NM_026168.3	Ergic2	NP_080444.1	ILMN_1256488	006200484	S	2614	CGGGACAGCTCTCCAGAATTTTGTTAGCAAGAACTGGTCACTTGAGACTG	6	-	148128759-148128808	6qG3	Mus musculus ERGIC and golgi 2 (Ergic2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		1200009B18Rik; 4930572C01Rik; AA408438; Ptx1	1200009B18Rik; 4930572C01Rik; AA408438; Ptx1
Mus musculus	RefSeq	ILMN_193740	ILMN_229225	ERGIC2	NM_026168.3	NM_026168.3		67456	142366567	NM_026168.3	Ergic2	NP_080444.1	ILMN_1241196	006330739	S	592	GATGCGTGCAGAATCCATGGTCATCTCTATGTCAATAAAGTAGCAGGGAA	6	-	148143737-148143786	6qG3	Mus musculus ERGIC and golgi 2 (Ergic2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		1200009B18Rik; 4930572C01Rik; AA408438; Ptx1	1200009B18Rik; 4930572C01Rik; AA408438; Ptx1
Mus musculus	RefSeq	ILMN_218322	ILMN_218322	HOXD13	NM_008275.2	NM_008275.2		15433	120586993	NM_008275.2	Hoxd13	NP_032301.2	ILMN_2694339	004890465	S	625	TTTGGATCCGGGGAACCTCGGCACGAGGCATACATCTCCATGGAGGGCTA	2	+	74506991-74507040	2qC3	Mus musculus homeo box D13 (Hoxd13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IGI]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IGI]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	spdh; Hox-4.8	spdh; Hox-4.8
Mus musculus	RefSeq	ILMN_214718	ILMN_214718	LYAR	NM_025281.2	NM_025281.2		17089	142370829	NM_025281.2	Lyar	NP_079557.1	ILMN_2651126	006100487	S	1100	GGGACCATTAAGGCTGTTTTGAAACAGGCTCCAGACAACGAGATATCAGT	5	+	38624499-38624548	5qB3	Mus musculus Ly1 antibody reactive clone (Lyar), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215810	ILMN_215810	PITX2	NM_011098.3	NM_011098.3		18741	109948273	NM_011098.3	Pitx2	NP_035228.2	ILMN_1220244	007320338	S	1398	CTACGTCTTTCGCTAAGAGTATTCCCAACAGTTGGAGGACGCGTACGCCC	3	+	128922004-128922053	3qG3	Mus musculus paired-like homeodomain transcription factor 2 (Pitx2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31076] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle [goid 2074] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]	solurshin; Munc30; Brx1a; Pitx2b; Brx1b; 9430085M16Rik; Brx1; Pitx2a; Pitx2c; Otlx2; Rieg; Ptx2	solurshin; Munc30; Brx1a; Pitx2b; Brx1b; 9430085M16Rik; Brx1; Pitx2a; Pitx2c; Otlx2; Rieg; Ptx2
Mus musculus	RefSeq	ILMN_215810	ILMN_215810	PITX2	NM_011098.3	NM_011098.3		18741	109948273	NM_011098.3	Pitx2	NP_035228.2	ILMN_2705765	003710632	S	339	AGACTCCGAAATCAAAAAGGTCGAGTTCACGGACTCTCCCAAGAGCCGGA	3	+	128907395-128907444	3qG3	Mus musculus paired-like homeodomain transcription factor 2 (Pitx2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31076] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle [goid 2074] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]	solurshin; Munc30; Brx1a; Pitx2b; Brx1b; 9430085M16Rik; Brx1; Pitx2a; Pitx2c; Otlx2; Rieg; Ptx2	solurshin; Munc30; Brx1a; Pitx2b; Brx1b; 9430085M16Rik; Brx1; Pitx2a; Pitx2c; Otlx2; Rieg; Ptx2
Mus musculus	Riken	ILMN_203643	ILMN_203643	9330183F02RIK	ri|9330183F02|PX00106N04|AK034362|2754					AK034362	9330183F02Rik		ILMN_2558866	006420524	S	2535	GAAGAGAGGGCAGAAGGACTATAAAAGCTAGAGGAAGAGGGATTTTGCTG										
Mus musculus	RefSeq	ILMN_210425	ILMN_210425	RFPL4	NM_138954.2	NM_138954.2		192658	141801974	NM_138954.2	Rfpl4	NP_620404.1	ILMN_2605489	004250671	S	1085	CCTGTGACAAATCCAGGCATTTTCGGAATTCCAGTTAACCCCCAATAAGG	7	-	5061916-5061918:5061919-5061965	7qA1	Mus musculus ret finger protein-like 4 (Rfpl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D7Ertd486e	D7Ertd486e
Mus musculus	Riken	ILMN_204729	ILMN_204729	B930026D14RIK	ri|B930026D14|PX00163K18|AK047144|1757					AK047144	B930026D14Rik		ILMN_1243548	000160619	S	1697	GCTGCCAGAGCAGCAAGTGCGTCTTTTCTCTCCAAGAGAGGGACAGAAAC										
Mus musculus	RefSeq	ILMN_186318	ILMN_231480	LOC636818	XM_912339.2	XM_912339.2		636818	94377642	XM_912339.2	LOC636818	XP_917432.2	ILMN_2434512	003290543	S	15	GCAGATTTTCAGCTTCCTGCTAATCAGCAGAGTCATACTGTCCAGAGGAC					PREDICTED: Mus musculus similar to Ig kappa chain V-VI region NQ2-17.4.1 (LOC636818), mRNA.					
Mus musculus	RefSeq	ILMN_241583	ILMN_241583	ALDH4A1	NM_175438.3	NM_175438.3		212647	34328414	NM_175438.3	Aldh4a1	NP_780647.2	ILMN_2874554	005870754	S	3117	CCAGTATGTGCTGTGGTGGCTGATCTTATGTGTCACCTTTGCCTGGCCAC	4	+	139205484-139205533	4qD3	Mus musculus aldehyde dehydrogenase 4 family, member A1 (Aldh4a1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6560] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 1-pyrroline-5-carboxylate + NAD+ + H2O = L-glutamate + NADH + H+ [goid 3842] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]	Aldh5a1; Ssdh1; P5CD; ALDH4; E330022C09; P5CDH; P5CDhL; A930035F14Rik; Ahd-1; P5CDhS; Ahd1	Aldh5a1; Ssdh1; P5CD; ALDH4; E330022C09; P5CDH; P5CDhL; A930035F14Rik; Ahd-1; P5CDhS; Ahd1
Mus musculus	RefSeq	ILMN_217682	ILMN_217682	GAS6	NM_019521.2	NM_019521.2		14456	145301602	NM_019521.2	Gas6	NP_062394.2	ILMN_2686327	003290523	S	2263	AGCAGGGTTTGGACACACAGCACTGGCTCCTCTCGCATGGTCCTGCAACA				8qA1.1	Mus musculus growth arrest specific 6 (Gas6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Gas-6	Gas-6
Mus musculus	RefSeq	ILMN_261324	ILMN_261324	ASTN2	NM_019514.3	NM_019514.3		56079	118130659	NM_019514.3	Astn2	NP_062387.2	ILMN_3156714	003310068	A	4284	TTATGGATGGAAGTCAATGCGGCGGCAGGAGCTTTCGGGCGGAGACCAAG	4	-	65042178-65042227	4qC1	Mus musculus astrotactin 2 (Astn2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	bM452J22.1	bM452J22.1
Mus musculus	RefSeq	ILMN_210805	ILMN_261324	ASTN2	NM_019514.3	NM_019514.3		56079	118130659	NM_019514.3	Astn2	NP_062387.2	ILMN_1250707	003780709	S	4128	GGCACATGACACTTGCCAGCAAGGCCAAAGCAAACTGTTTCTCCGTGGAC	4	-	65042334-65042383	4qC1	Mus musculus astrotactin 2 (Astn2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	bM452J22.1	bM452J22.1
Mus musculus	RefSeq	ILMN_219713	ILMN_244534	6030498E09RIK	NM_183126.2	NM_183126.2		77883	124286798	NM_183126.2	6030498E09Rik	NP_898949.2	ILMN_2775338	006620364	S	562	GGAGCAGAAGAAGGTGGGCAAGATAATCATCAGACCAAAGCAACCTGAGA	X	+	36312685-36312732:36312733-36312734	XqA3.3	Mus musculus RIKEN cDNA 6030498E09 gene (6030498E09Rik), mRNA.					
Mus musculus	Riken	ILMN_202155	ILMN_202155	3110009N10RIK	ri|3110009N10|ZX00070N22|AK014036|509					AK014036	3110009N10Rik		ILMN_1230523	000110037	S	337	GATACTGGAGTACTGACTCCCATCACACCCTTTTCATGCCTAGTGACCTG										
Mus musculus	RefSeq	ILMN_217926	ILMN_217926	NKX2-9	NM_008701.2	NM_008701.2		18094	111154094	NM_008701.2	Nkx2-9	NP_032727.2	ILMN_3154305	006250577	A	865	TCGGCGCTTGGCCTCTTCCCAGCCTACCAGCACTTAGCACCACCAGCTCT	12	-	57712725-57712774	12qC1	Mus musculus NK2 transcription factor related, locus 9 (Drosophila) (Nkx2-9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract [goid 30323] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Nkx-2.9; tinman; Nkx2.9	Nkx-2.9; tinman; Nkx2.9
Mus musculus	MEEBO	ILMN_215440	ILMN_215440	FTL1	scl0014325.1_328	NM_010240.1			6753913	NM_010240.1	Ftl1		ILMN_1229517	007570703	S	848	GCAGCTTTGTAACCGTCCTCCAGCCTCTGTCAAGTCTTGGACCAAGTAAA							The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219374	ILMN_219374	OOSP1	NM_133353.3	NM_133353.3		170834	142354986	NM_133353.3	Oosp1	NP_579931.1	ILMN_2707996	001230524	S	605	GATCAAAACTTCTCGGTTTTCCATTTCTCCAGAATGTAGATGGTCTGGTG	19	-	11742168-11742179:11742180-11742217	19qA	Mus musculus oocyte secreted protein 1 (Oosp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISA]			AA536827	AA536827
Mus musculus	MEEBO	ILMN_211959	ILMN_211959	3110047P20RIK	scl27788.8.2924_41	XM_132047.3			38081743	XM_132047.3	3110047P20Rik		ILMN_2621169	002070239	S	5465	CAGTCAGTTGTGGGGGAGCCTAATGTTTCCCAGACCCCTGCAGTATCTTA								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209980	ILMN_209980	ACTR8	NM_027493.2	NM_027493.2		56249	142380053	NM_027493.2	Actr8	NP_081769.1	ILMN_2601043	000540528	S	1756	CCGCCTTCATTCAGGCGAATTATTGAAAACGTGGATGTGATCACAAGGCC	14	+	30804886-30804935	14qB	Mus musculus ARP8 actin-related protein 8 homolog (S. cerevisiae) (Actr8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARP8; 5730542K05Rik	ARP8; 5730542K05Rik
Mus musculus	RefSeq	ILMN_220622	ILMN_220622	MRPL24	NM_026591.1	NM_026591.1		67707	21311902	NM_026591.1	Mrpl24	NP_080867.1	ILMN_2802601	002340524	S	702	GGCATTGTCCCTGAAACATGGACTGATGGCCCCAAGGACATATCAGTGGA	3	+	88008969-88008992:88009137-88009162	3qF1	Mus musculus mitochondrial ribosomal protein L24 (Mrpl24), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC38056; 2010005E08Rik; MGC7749; AA407670; MGC25749; 6720473G22Rik; 2810470K06Rik	MGC38056; 2010005E08Rik; MGC7749; AA407670; MGC25749; 6720473G22Rik; 2810470K06Rik
Mus musculus	RefSeq	ILMN_210700	ILMN_210700	FLCN	NM_146018.1	NM_146018.1		216805	22122492	NM_146018.1	Flcn	NP_666130.1	ILMN_1229936	000520039	S	1688	GGCCCACTATCCTGAATAAGATTGAAGCAGCTCTGACCAACCAGAACCTG	11	-	59607640-59607689	11qB1.3	Mus musculus folliculin (Flcn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B430214A04Rik; MGC37841; FLCL; Bhd; AU014660	B430214A04Rik; MGC37841; FLCL; Bhd; AU014660
Mus musculus	RefSeq	ILMN_210700	ILMN_210700	FLCN	NM_146018.1	NM_146018.1		216805	22122492	NM_146018.1	Flcn	NP_666130.1	ILMN_1213483	005360551	S	2645	CACTGTAGACTATGACGGTGTTACGACAGATCGCCTCTCACCATTGCAGT	11	-	59605409-59605458	11qB1.3	Mus musculus folliculin (Flcn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B430214A04Rik; MGC37841; FLCL; Bhd; AU014660	B430214A04Rik; MGC37841; FLCL; Bhd; AU014660
Mus musculus	RefSeq	ILMN_201142	ILMN_201142	LOC384864	XM_357904.1	XM_357904.1			38089438	XM_357904.1	LOC384864		ILMN_1228424	005420762	S	251	AGAGTGGCGATGAGAGAGAGCGACAACCACAAGCCCGCGTCTTCACTGCA										
Mus musculus	RefSeq	ILMN_214936	ILMN_214936	GDF9	NM_008110.1	NM_008110.1		14566	6679982	NM_008110.1	Gdf9	NP_032136.1	ILMN_1225090	006860349	S	1509	GCAGTGTCCGTAGGTGTAAAGGGCACACTCACTGGTCGTTGCCATAAACC	11	+	53251201-53251250	11qB1.3	Mus musculus growth differentiation factor 9 (Gdf9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IMP]; The process by which an oocyte irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 1555] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Gdf-9	Gdf-9
Mus musculus	RefSeq	ILMN_220448	ILMN_220448	MTAP1B	NM_008634.1	NM_008634.1		17755	6678945	NM_008634.1	Mtap1b	NP_032660.1	ILMN_2932081	000240246	S	8322	CACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG	13	-	100194837-100194886	13qD1	Mus musculus microtubule-associated protein 1 B (Mtap1b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence TAS]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]	Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]	MAP1B; Mtap-5; MAP5; Mtap5; LC1; A230055D22; AI843217	MAP1B; Mtap-5; MAP5; Mtap5; LC1; A230055D22; AI843217
Mus musculus	RefSeq	ILMN_220448	ILMN_220448	MTAP1B	NM_008634.1	NM_008634.1		17755	6678945	NM_008634.1	Mtap1b	NP_032660.1	ILMN_2750248	006180048	S	8598	GTGGCCACTCAACCAAATCCGTTGCACCTTTCGTAGCTTCTTTAATTCTT	13	-	100194561-100194610	13qD1	Mus musculus microtubule-associated protein 1 B (Mtap1b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence TAS]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]	Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]	MAP1B; Mtap-5; MAP5; Mtap5; LC1; A230055D22; AI843217	MAP1B; Mtap-5; MAP5; Mtap5; LC1; A230055D22; AI843217
Mus musculus	RefSeq	ILMN_220448	ILMN_220448	MTAP1B	NM_008634.1	NM_008634.1		17755	6678945	NM_008634.1	Mtap1b	NP_032660.1	ILMN_2737867	005810332	S	1710	GCCAGTAAATCTGTGAGGAAGGAGTCCAAGGAGGAAACCCCTGAAGTCAC	13	-	100204460-100204509	13qD1	Mus musculus microtubule-associated protein 1 B (Mtap1b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence TAS]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]	Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]	MAP1B; Mtap-5; MAP5; Mtap5; LC1; A230055D22; AI843217	MAP1B; Mtap-5; MAP5; Mtap5; LC1; A230055D22; AI843217
Mus musculus	RefSeq	ILMN_220448	ILMN_220448	MTAP1B	NM_008634.1	NM_008634.1		17755	6678945	NM_008634.1	Mtap1b	NP_032660.1	ILMN_2932078	005820634	S	8470	CATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGG	13	-	100194689-100194738	13qD1	Mus musculus microtubule-associated protein 1 B (Mtap1b), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence TAS]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence TAS]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IMP]	Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence TAS]	MAP1B; Mtap-5; MAP5; Mtap5; LC1; A230055D22; AI843217	MAP1B; Mtap-5; MAP5; Mtap5; LC1; A230055D22; AI843217
Mus musculus	RefSeq	ILMN_199070	ILMN_199070	LOC270763	XM_196801.3	XM_196801.3			38090727	XM_196801.3	LOC270763		ILMN_1217018	003170059	S	1486	ATCGGCTCCTCCACCTCCAGCTCTTTGGAAACGGTTTCAGGACAGAGCAC										
Mus musculus	RefSeq	ILMN_203296	ILMN_191445	VPS13C	NM_177184.3	NM_177184.3		320528	122114536	NM_177184.3	Vps13c	NP_796158.2	ILMN_1227278	003420592	S	5688	CTTCTTCACAACCAAGCCCTACACAGTATGCACAGGAGGCTGCACGGGTG	9	+	67780311-67780360	9qC	Mus musculus vacuolar protein sorting 13C (yeast) (Vps13c), mRNA.		Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]		W51662; AV026040; AI552542; C230055H22Rik; chorein	W51662; AV026040; AI552542; C230055H22Rik; chorein
Mus musculus	RefSeq	ILMN_201217	ILMN_191445	VPS13C	NM_177184.3	NM_177184.3		320528	122114536	NM_177184.3	Vps13c	NP_796158.2	ILMN_1213306	000580427	S	11265	AGGGGCCGTCTTGACCATGGATTCTACAAGGCTTCTGAGGGGGAAGCGGC	9	+	67843183-67843196:67843197-67843232	9qC	Mus musculus vacuolar protein sorting 13C (yeast) (Vps13c), mRNA.		Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]		W51662; AV026040; AI552542; C230055H22Rik; chorein	W51662; AV026040; AI552542; C230055H22Rik; chorein
Mus musculus	RefSeq	ILMN_191445	ILMN_191445	VPS13C	NM_177184.3	NM_177184.3		320528	122114536	NM_177184.3	Vps13c	NP_796158.2	ILMN_2479134	004850209	S	2683	CTCGCAGGCTGCTAGAACTGTCAAAGCCTCAGAACTGAAAAAAGCTGCTG	9	+	67751403-67751452	9qC	Mus musculus vacuolar protein sorting 13C (yeast) (Vps13c), mRNA.		Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]		W51662; AV026040; AI552542; C230055H22Rik; chorein	W51662; AV026040; AI552542; C230055H22Rik; chorein
Mus musculus	RefSeq	ILMN_201216	ILMN_191445	VPS13C	NM_177184.3	NM_177184.3		320528	122114536	NM_177184.3	Vps13c	NP_796158.2	ILMN_2541505	004250142	S	10425	CAGTAGGTGGTGCAGCGGGAGTCGTATCTCGAATCACTGGGTCAGTTGGG	9	+	67820738-67820743:67821089-67821132	9qC	Mus musculus vacuolar protein sorting 13C (yeast) (Vps13c), mRNA.		Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]		W51662; AV026040; AI552542; C230055H22Rik; chorein	W51662; AV026040; AI552542; C230055H22Rik; chorein
Mus musculus	RefSeq	ILMN_252633	ILMN_252633	2310047D13RIK	NM_027773.1	NM_027773.1		116972	110625846	NM_027773.1	2310047D13Rik	NP_082049.1	ILMN_2909105	007320162	S	1627	TCCAGGTGTCCTGTAGGCCAGTGCTTCCTGCTAAGACAGACCCATTTCTG				11qB5	Mus musculus RIKEN cDNA 2310047D13 gene (2310047D13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			5430402E13Rik; Wdt3; RP23-147P4.4; 5430420K21Rik	5430402E13Rik; Wdt3; RP23-147P4.4; 5430420K21Rik
Mus musculus	MEEBO	ILMN_217497	ILMN_217497	SYT6	scl0054524.1_150	NM_018800.1			9055361	NM_018800.1	Syt6		ILMN_2683896	002850300	S	1307	CATCCCCCCAGAAAACATGGACCAAGTGAGCCTGCTCATCTCCGTTATGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IPI]		
Mus musculus	Riken	ILMN_202492	ILMN_202492	ZFP99	ri|2310046C23|ZX00040C08|AK009842|910					AK009842	Zfp99		ILMN_2550040	001980397	S	7	TCTGTCACCTGCCGAAATGAGAACTGAGAAGACCGGGTTCGCGTGTGTGC										
Mus musculus	MEEBO	ILMN_186852	ILMN_186852	NDE1	scl49399.9_518				12963634	NM_023317	Nde1		ILMN_2439044	000780504	S	4	GCCTAGAGTTGGACCTAGAACTTTTCGTGTGCTACTGACATTACAAGGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A centrosome from which one pole of a mitotic or meiotic spindle is organized [goid 31616] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IMP]; The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell [goid 7020] [evidence IDA]; The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51298] [evidence IMP]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IMP]		
Mus musculus	MEEBO	ILMN_185447	ILMN_185447	1190002F15RIK	scl0381822.1_19						1190002F15Rik		ILMN_2427096	004850324	S	10	GGCCAGAGGTACTAGGAAGGTACAGGCGGGAGTTCGACGAGGACGCACCT										
Mus musculus	RefSeq	ILMN_214747	ILMN_261416	OLFR510	NM_146311.1	NM_146311.1		258308	22129664	NM_146311.1	Olfr510	NP_666423.1	ILMN_1225331	006520382	S	591	CCTCATAATTCTTGATTCATTTTCTACTGGCACTATTATTGTAATCACAG	7	+	115811522-115811571	7qE3	Mus musculus olfactory receptor 510 (Olfr510), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-34	MOR204-34
Mus musculus	MEEBO	ILMN_190786	ILMN_190786	PRKG1	scl52554.28_37				6755155	NM_011160	Prkg1		ILMN_2473274	006480075	S	20	TGATTTGCTTTGTATTTTCCCTGCAGCTGTAATTGCAGAGTGCCTGTTGG						An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]	Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cGMP [goid 4692] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IDA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222178	ILMN_222178	GNS	NM_029364.3	NM_029364.3		75612	146141167	NM_029364.3	Gns	NP_083640.1	ILMN_1248555	002070747	S	3606	TGGAAGATGGCAGCCCAGAATCCTCAAGACAAAGCAAGGGGTATCAGCTG				10qD2	Mus musculus glucosamine (N-acetyl)-6-sulfatase (Gns), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate [goid 8449] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISO]	G6S; 2610016K11Rik; AU042285; N28088; C87209	G6S; 2610016K11Rik; AU042285; N28088; C87209
Mus musculus	RefSeq	ILMN_200361	ILMN_200361	LOC386304	XM_359165.1	XM_359165.1			38081416	XM_359165.1	LOC386304		ILMN_1255627	002060739	S	1021	ACCATAGATGGAGAAACCAAAGACAGGAACCACGCCCTAGAAAAAACAAG										
Mus musculus	MEEBO	ILMN_191732	ILMN_191732	USP19	scl0071472.2_238				47825365	NM_027804	Usp19		ILMN_1254051	004200082	S	1	ATTCTTTCTGACCTGCATTACAAACATTATAATTTTATTCTAAAAATTGT							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213091	ILMN_213091	FOXN2	NM_180974.3	NM_180974.3		14236	146198656	NM_180974.3	Foxn2	NP_851305.1	ILMN_1215910	007320382	S	2705	TCTGGGACATTACCTCAGCAGCATAGAAGGAACCAGGAGGATGTGTATCC				17qE4	Mus musculus forkhead box N2 (Foxn2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Foxn1; 6030465J18Rik; 3230402J05Rik; Fkh19; HTLF	Foxn1; 6030465J18Rik; 3230402J05Rik; Fkh19; HTLF
Mus musculus	Riken	ILMN_204463	ILMN_204463	B130030F12RIK	ri|B130030F12|PX00157F09|AK045079|1235					AK045079	B130030F12Rik		ILMN_1252336	001570553	S	815	TTCCCCACACCTTTAGCCCAGGGACTGAGACAGCAGTGGCACAGGATACT										
Mus musculus	RefSeq	ILMN_217647	ILMN_217647	GDPD3	NM_024228.2	NM_024228.2		68616	110431345	NM_024228.2	Gdpd3	NP_077190.2	ILMN_2893879	005090722	S	843	TCTGATCCGACACTTGCAGGACCGAGGGGTGCAGGTGCTATTTTGGTGCC	7	+	133914694-133914727:133918968-133918983	7qF3	Mus musculus glycerophosphodiester phosphodiesterase domain containing 3 (Gdpd3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	1110015E22Rik	1110015E22Rik
Mus musculus	MEEBO	ILMN_193212	ILMN_193212	4930518I15RIK	scl18435.1.124_32						4930518I15Rik		ILMN_2495051	007200458	S	17	CTGTAAGTCTTGGGCCTAACTGTTGAGCTGTAGGGGACACTAACAGACCC										
Mus musculus	RefSeq	ILMN_221697	ILMN_221697	CAP2	NM_026056.3	NM_026056.3		67252	133892243	NM_026056.3	Cap2	NP_080332.1	ILMN_2739218	003130594	S	2689	TTATGAACTATGTGGTGGCTTTAGTAAGTATAATTTTTTGAACAGTAAAG	13	+	46744925-46744974	13qA5	Mus musculus CAP, adenylate cyclase-associated protein, 2 (yeast) (Cap2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2810452G09Rik; AV045235	2810452G09Rik; AV045235
Mus musculus	RefSeq	ILMN_221808	ILMN_221808	JMJD6	NM_033398.2	NM_033398.2		107817	125988378	NM_033398.2	Jmjd6	NP_203971.2	ILMN_1242377	006370367	S	1589	TGGTCATGTCTTAGGGGCAAAGGCGTGTGGATGGTGCCAATGAAACCCTT	11	-	116698775-116698824	11qE2	Mus musculus jumonji domain containing 6 (Jmjd6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process by which a cell interprets signals (in the form of specific proteins and lipids) on the surface of a dying cell which it will engulf and remove by phagocytosis [goid 43654] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte [goid 43277] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte [goid 43277] [evidence IMP]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Ptdsr; mKIAA0585; PtdSerR; PSR; D11Ertd195e; 5730436I23Rik	Ptdsr; mKIAA0585; PtdSerR; PSR; D11Ertd195e; 5730436I23Rik
Mus musculus	RefSeq	ILMN_196995	ILMN_316923	PIK3C2B	XM_001479658.1	XM_001479658.1		240752	149234310	XM_001479658.1	Pik3c2b	XP_001479708.1	ILMN_2526530	007150195	S	4849	CAGGAGAAGACCGGCTGGTTTGGACTGGGTTCTCGAGGTCATGGAACCTA	1	+	135002685-135002734	1qE4	PREDICTED: Mus musculus phosphoinositide-3-kinase, class 2, beta polypeptide (Pik3c2b), mRNA.					
Mus musculus	Riken	ILMN_207149	ILMN_207149	F730011O15RIK	ri|F730011O15|PL00003G09|AK089348|816					AK089348	F730011O15Rik		ILMN_2585405	000650356	S	533	TCGAGATGGAACGAGACCTTCTGATAGCACCCTGGGAAGCCTCTGGCTGA										
Mus musculus	Riken	ILMN_205727	ILMN_205727	HBB-B1	ri|9830142B20|PX00119K03|AK036620|3219					AK036620	Hbb-b1		ILMN_1228877	001440576	S	3071	AGGCTGAAGTCTGGGGAGAGAAGGGAAGACATTCTTACTGGGTGAAGACC						An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IMP]		
Mus musculus	RefSeq	ILMN_222035	ILMN_222035	PRKCB	NM_008855.2	NM_008855.2		18751	116734871	NM_008855.2	Prkcb	NP_032881.1	ILMN_1225085	003440646	S	2980	TCCTGGAACCACATGGTCACTCTAGCCAGGTCCCAAAGGACCCTGATTCT	7	+	129772066-129772115	7qF3	Mus musculus protein kinase C, beta (Prkcb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IDA];  [goid 5246] [evidence IDA]	A130082F03Rik; PKC-Beta; Pkcb; Prkcb; Prkcb2	A130082F03Rik; PKC-Beta; Pkcb; Prkcb; Prkcb2
Mus musculus	RefSeq	ILMN_193914	ILMN_222035	PRKCB	NM_008855.2	NM_008855.2		18751	116734871	NM_008855.2	Prkcb	NP_032881.1	ILMN_2501605	003060360	S	8298	TAACCCAGAGTTTGTCATTAATGTGTAGGTGAATGCAGAGTCCATTGCCG	7	+	129777384-129777433	7qF3	Mus musculus protein kinase C, beta (Prkcb), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IDA];  [goid 5246] [evidence IDA]	A130082F03Rik; PKC-Beta; Pkcb; Prkcb; Prkcb2	A130082F03Rik; PKC-Beta; Pkcb; Prkcb; Prkcb2
Mus musculus	Riken	ILMN_205936	ILMN_205936	C130040J09RIK	ri|C130040J09|PX00169I02|AK048211|3525					AK048211	C130040J09Rik		ILMN_1247097	005080500	S	3128	CCCAGAGAGTTCGTTGATAACTATCCAGTATACAGCCACCTTCCACTTGC										
Mus musculus	Riken	ILMN_205671	ILMN_205671	PCBP2	ri|C130051A12|PX00170C21|AK048345|3404					AK048345	Pcbp2		ILMN_2574367	004180372	S	3193	GAATGTTCTAGTAGTGTGGGTAGAGTAAGGTAGACTGTAAGGACTTGGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Mus musculus	RefSeq	ILMN_260801	ILMN_260801	CCDC93	NM_001025156.1	NM_001025156.1		70829	68448541	NM_001025156.1	Ccdc93	NP_001020327.1	ILMN_3033524	006400474	I	2093	GACTACAGGATCTTGACATGGTTCTGCCGGTGATGGCAGAGAGACCCAGG	1	+	123397874-123397923	1qE2.3	Mus musculus coiled-coil domain containing 93 (Ccdc93), transcript variant 1, mRNA.				9230102M16Rik; 4633402D15Rik	9230102M16Rik; 4633402D15Rik
Mus musculus	RefSeq	ILMN_204946	ILMN_260801	CCDC93	NM_001025156.1	NM_001025156.1		70829	68448541	NM_001025156.1	Ccdc93	NP_001020327.1	ILMN_1244110	007320678	S	1464	GGTGCCCTGACCTCCACCATGACTCACAATGAGGACCTGGACAGACGGTA	1	+	123379888-123379917:123383180-123383199	1qE2.3	Mus musculus coiled-coil domain containing 93 (Ccdc93), transcript variant 1, mRNA.				9230102M16Rik; 4633402D15Rik	9230102M16Rik; 4633402D15Rik
Mus musculus	RefSeq	ILMN_260801	ILMN_260801	CCDC93	NM_001025156.1	NM_001025156.1		70829	68448541	NM_001025156.1	Ccdc93	NP_001020327.1	ILMN_3107208	004390121	A	409	CGGAAAAGATTGTCTCCGTCCTCCCAAGGATGAAGTGTCCCCACCAGCTG	1	+	123338367-123338416	1qE2.3	Mus musculus coiled-coil domain containing 93 (Ccdc93), transcript variant 1, mRNA.				9230102M16Rik; 4633402D15Rik	9230102M16Rik; 4633402D15Rik
Mus musculus	RefSeq	ILMN_192962	ILMN_230998	RBBP5	NM_172517.1	NM_172517.1		213464	27369713	NM_172517.1	Rbbp5	NP_766105.1	ILMN_2766338	003780670	S	2605	CCCCCAAATCAAAGCAACAGCAGCCCACTTCAAATCAAAGATGAGGTTCG	1	+	134401228-134401277	1qE4	Mus musculus retinoblastoma binding protein 5 (Rbbp5), mRNA.	A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C330016J05; 4933411J24Rik	C330016J05; 4933411J24Rik
Mus musculus	RefSeq	ILMN_192962	ILMN_230998	RBBP5	NM_172517.1	NM_172517.1		213464	27369713	NM_172517.1	Rbbp5	NP_766105.1	ILMN_2726109	003370543	S	1661	CTCTGGAAGGATCAACGAAGGGTAAAGTGCAGGCGGAACTCAGCCAGTCC	1	+	134394642-134394691	1qE4	Mus musculus retinoblastoma binding protein 5 (Rbbp5), mRNA.	A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C330016J05; 4933411J24Rik	C330016J05; 4933411J24Rik
Mus musculus	RefSeq	ILMN_230998	ILMN_230998	RBBP5	NM_172517.1	NM_172517.1		213464	27369713	NM_172517.1	Rbbp5	NP_766105.1	ILMN_2790735	006760546	S	2676	GAGAACCTGTCCCCGGCAGCCATAGTTTGTCCTTTCCTGGAGCTACGCCC	1	+	134401299-134401348	1qE4	Mus musculus retinoblastoma binding protein 5 (Rbbp5), mRNA.	A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	C330016J05; 4933411J24Rik	C330016J05; 4933411J24Rik
Mus musculus	MEEBO	ILMN_190426	ILMN_190426	PPP2R3A	scl0019054.1_75				51784309	XM_356255	Ppp2r3a		ILMN_2543121	000650736	S	923	TGAGAACGACGGGACCCAGGACGGTCCATGCCCACAGGAAGGAGGAGCCC								Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199202	ILMN_199202	LOC276837	XM_203404.3	XM_203404.3			38091777	XM_203404.3	LOC276837		ILMN_1232804	000630411	S	1060	CCTGTCTGAGGTGGACTATGCCGATTATTACCAGGGCCTATGGGATTGCC										
Mus musculus	RefSeq	ILMN_217154	ILMN_324507	LOC100046616	XM_001476512.1	XM_001476512.1		100046616	149267091	XM_001476512.1	LOC100046616	XP_001476562.1	ILMN_1259982	000610255	S	728	TGGGCTCCCCAGCCTTATCCATTGGCTTGTCGGTCACACTGGGCCATCTT					PREDICTED: Mus musculus similar to aquaporin 5 (LOC100046616), mRNA.					
Mus musculus	RefSeq	ILMN_201361	ILMN_212750	ZFP652	NM_201609.2	NM_201609.2		268469	124378027	NM_201609.2	Zfp652	NP_963903.2	ILMN_2542029	007380537	S	1671	CAGTGAATGTGCCGCCAGCTGTCCAGATCCCACTGGCCTCAGCTCCAGCT	11	+	95625033-95625082	11qD	Mus musculus zinc finger protein 652 (Zfp652), mRNA. XM_991905 XM_991929	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ZNF652; 9530033F24Rik; MGC67134	ZNF652; 9530033F24Rik; MGC67134
Mus musculus	RefSeq	ILMN_212750	ILMN_212750	ZFP652	NM_201609.2	NM_201609.2		268469	124378027	NM_201609.2	Zfp652	NP_963903.2	ILMN_2831341	000010593	S	820	TAGGAAAAGTGCAGAGCTACCCAAGAGGAAGAAGCGGGCCACCAAGGAGG	11	+	95611200-95611249	11qD	Mus musculus zinc finger protein 652 (Zfp652), mRNA. XM_991905 XM_991929	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ZNF652; 9530033F24Rik; MGC67134	ZNF652; 9530033F24Rik; MGC67134
Mus musculus	RefSeq	ILMN_189979	ILMN_189979	TWISTNB	NM_172253.2	NM_172253.2		28071	85861256	NM_172253.2	Twistnb	NP_758457.1	ILMN_2466121	001340408	S	770	GTTACAGAGGTTGCAGATGTTACAGATGTCACGCCACAGGAAGAAACAGA	12	+	34122691-34122740	12qA3	Mus musculus TWIST neighbor (Twistnb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	2410173G11; 2810024J17Rik; D16Wsu83e	2410173G11; 2810024J17Rik; D16Wsu83e
Mus musculus	RefSeq	ILMN_189979	ILMN_189979	TWISTNB	NM_172253.2	NM_172253.2		28071	85861256	NM_172253.2	Twistnb	NP_758457.1	ILMN_1231779	005390129	S	776	GAGGTTGCAGATGTTACAGATGTCACGCCACAGGAAGAAACAGACATACC	12	+	34122697-34122746	12qA3	Mus musculus TWIST neighbor (Twistnb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	2410173G11; 2810024J17Rik; D16Wsu83e	2410173G11; 2810024J17Rik; D16Wsu83e
Mus musculus	RefSeq	ILMN_199761	ILMN_199761	LOC383897	XM_357315.1	XM_357315.1			38076965	XM_357315.1	LOC383897		ILMN_2536389	003190669	S	357	ACTGCATCAGGCCTTGCTGCGGCTGCCCCGGTGTCACAGCAGGTCTCTTG										
Mus musculus	RefSeq	ILMN_211428	ILMN_211428	GPR141	NM_181754.3	NM_181754.3		353346	142384476	NM_181754.3	Gpr141	NP_861419.2	ILMN_2615804	002850128	S	1135	GCGGAAGTTTCGCCACTCCTTACTATCCCACCAGGAGTTCTGGGCACAAC	13	-	19843799-19843848	13qA2	Mus musculus G protein-coupled receptor 141 (Gpr141), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	PGR13	PGR13
Mus musculus	RefSeq	ILMN_246669	ILMN_246669	4930455C21RIK	NM_024273.1	NM_024273.1		76916	13357215	NM_024273.1	4930455C21Rik	NP_077235.1	ILMN_2838965	000870484	S	1309	CCAGATGCTGGGAGGCTGAGAAAGGAAGATAGTGTGATGCTAGCCTGAGC	16	-	38498605-38498654	16qB4	Mus musculus RIKEN cDNA 4930455C21 gene (4930455C21Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	AV135763; 2810021C21Rik	AV135763; 2810021C21Rik
Mus musculus	MEEBO	ILMN_222996	ILMN_222996	C330011F03	scl49806.5.1_109				51830587	XM_488824	C330011F03		ILMN_1218666	000050541	S	1996	GGGTCACCTCCCTCAGCAACTGGACGTCCTTTGGTTAAAATGCCCTGAGC										
Mus musculus	MEEBO	ILMN_187233	ILMN_187233	DSG1C	scl52215.16.1_306				32129204	NM_181680	Dsg1c		ILMN_1253233	001340279	S	1	GAGTACCGTATTCTTTCCCCTAATATCCCTGTCTGGGAACTGATATTCTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence TAS]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195066	ILMN_195066	V1RH16	NM_134240.1	NM_134240.1		171274	21717790	NM_134240.1	V1rh16	NP_599001.1	ILMN_1232254	003870382	S	443	CTACCACAAATACAAGACTGAATATATCACACTTTAGGGGTGATGAGAGC	13	-	23324418-23324467	13qA3.1	Mus musculus vomeronasal 1 receptor, H16 (V1rh16), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_201124	ILMN_201124	LOC384837	XM_357890.1	XM_357890.1			38089296	XM_357890.1	LOC384837		ILMN_2541173	000240176	S	10	AGTACAAGAGGTTCTGGTCCTCCCCGGATGAGAGCCGAGGCGAGTGGGCT										
Mus musculus	RefSeq	ILMN_220576	ILMN_220576	EDN2	NM_007902.2	NM_007902.2		13615	122937364	NM_007902.2	Edn2	NP_031928.2	ILMN_2723965	006960142	S	1078	CTCTTGGGACACTTTTGGGAGCACAGAACCTGCTGTACTTCGCTCATCTG	4	+	119839799-119839848	4qD2.2	Mus musculus endothelin 2 (Edn2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A decrease in the diameter of blood vessels, especially arteries, usually causing an increase in blood pressure [goid 42310] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of smooth muscle contraction [goid 45987] [evidence IDA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IEA]		VIC	VIC
Mus musculus	RefSeq	ILMN_186276	ILMN_216147	TBRG1	NM_025289.2	NM_025289.2		21376	54607162	NM_025289.2	Tbrg1	NP_079565.1	ILMN_2434144	003990349	S	1381	GGGCTACACTGGGATGGAGATTTCAGGTGCTGCAGGTCAGTGTCAACCAA	9	-	37456901-37456942:37456943-37456950	9qA4	Mus musculus transforming growth factor beta regulated gene 1 (Tbrg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence ISS]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence ISS]; The directed movement of substances from the nucleolus to the nucleoplasm [goid 32066] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	mFLJ00213; NIAM; TB-5; AA408552; AA409675	mFLJ00213; NIAM; TB-5; AA408552; AA409675
Mus musculus	RefSeq	ILMN_216147	ILMN_216147	TBRG1	NM_025289.2	NM_025289.2		21376	54607162	NM_025289.2	Tbrg1	NP_079565.1	ILMN_1244753	006020739	S	1429	CTCCTCATTATGAGTTTTAAACGAAAACTCACTCTGTGGAAGGAGGCAGC	9	-	37456853-37456902	9qA4	Mus musculus transforming growth factor beta regulated gene 1 (Tbrg1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence ISS]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence ISS]; The directed movement of substances from the nucleolus to the nucleoplasm [goid 32066] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	mFLJ00213; NIAM; TB-5; AA408552; AA409675	mFLJ00213; NIAM; TB-5; AA408552; AA409675
Mus musculus	RefSeq	ILMN_212683	ILMN_212683	MATN4	NM_013592.2	NM_013592.2		17183	31980776	NM_013592.2	Matn4	NP_038620.1	ILMN_2729289	002600360	S	2140	GTGCTGGTGGGGAAGGACTGCTACACTCGCCGCGAGCTTTGTTGGATTTC	2	-	164215182-164215231	2qH3	Mus musculus matrilin 4 (Matn4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			matrilin-4	matrilin-4
Mus musculus	RefSeq	ILMN_212683	ILMN_212683	MATN4	NM_013592.2	NM_013592.2		17183	31980776	NM_013592.2	Matn4	NP_038620.1	ILMN_1215854	001340445	S	916	CACCTCTGTGTCAACTCCGTGGACTCGTATTTCTGTCGTTGCCGAGCTGG	2	-	164222934-164222983	2qH3	Mus musculus matrilin 4 (Matn4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			matrilin-4	matrilin-4
Mus musculus	RefSeq	ILMN_212683	ILMN_212683	MATN4	NM_013592.2	NM_013592.2		17183	31980776	NM_013592.2	Matn4	NP_038620.1	ILMN_2913500	004230528	S	1931	TGACAGAGCGCCTGGAGGAGCTGGAGAACCAGCTGGCTAGCCGAAAGTGA	2	-	164215391-164215391:164215392-164215440	2qH3	Mus musculus matrilin 4 (Matn4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			matrilin-4	matrilin-4
Mus musculus	RefSeq	ILMN_196584	ILMN_196584	EPOR	NM_010149.3	NM_010149.3		13857	116292185	NM_010149.3	Epor	NP_034279.3	ILMN_2749650	000020040	S	1574	GGGGACTCATCTGATGGCCCCTACTCCCACCCCTATGAGAACAGCCTTGT	9	-	21763548-21763597	9qA3	Mus musculus erythropoietin receptor (Epor), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA];  [goid 4896] [evidence IEA]		
Mus musculus	RefSeq	ILMN_231868	ILMN_231868	RRM1	NM_009103.2	NM_009103.2		20133	31982025	NM_009103.2	Rrm1	NP_033129.2	ILMN_2977624	006400348	S	2617	TTGCTTGGTTATCAGCAGCTCTGCTTGGACGTGCCTGCCAGGACAGGGAG	7	+	109617077-109617126	7qE3	Mus musculus ribonucleotide reductase M1 (Rrm1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex composed of 2-4 or more subunits, which usually contains nonheme iron and requires ATP for catalysis. Catalyzes the formation of 2'-deoxyribonucleoside diphosphate and thioredoxin disulfide from ribonucleoside diphosphate and thioredoxin [goid 5971] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9263] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IDA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence IPI]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RnrM1	RnrM1
Mus musculus	RefSeq	ILMN_209747	ILMN_233024	HIST2H2AC	NM_175662.1	NM_175662.1		319176	30089709	NM_175662.1	Hist2h2ac	NP_783593.1	ILMN_1218380	000240450	S	331	AACATCCAGGCCGTGCTGCTGCCCAAGAAGACCGAGAGCCACAAGGCTAA	3	-	96024387-96024436	3qF2.1	Mus musculus histone cluster 2, H2ac (Hist2h2ac), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2a-613b	H2a-613b
Mus musculus	RefSeq	ILMN_196734	ILMN_233024	HIST2H2AC	NM_175662.1	NM_175662.1		319176	30089709	NM_175662.1	Hist2h2ac	NP_783593.1	ILMN_1254276	006290326	S	1	ATGTCTGGCCGTGGCAAACAGGGAGGCAAGGCCCGCGCCAAGGCCAAGTC	3	-	96024717-96024766	3qF2.1	Mus musculus histone cluster 2, H2ac (Hist2h2ac), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2a-613b	H2a-613b
Mus musculus	RefSeq	ILMN_215310	ILMN_224550	A530054K11RIK	NM_183146.3	NM_183146.3		212281	110624757	NM_183146.3	A530054K11Rik	NP_898969.2	ILMN_2657930	004890437	S	377	GGACCAAAGTGTTCCAAAATCATGAGATGCTTTATATAGGAATGAATCCC	13	-	67722690-67722739	13qB3	Mus musculus RIKEN cDNA A530054K11 gene (A530054K11Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rslcan3	Rslcan3
Mus musculus	RefSeq	ILMN_239537	ILMN_239537	B3GNT3	NM_028189.2	NM_028189.2		72297	31982624	NM_028189.2	B3gnt3	NP_082465.2	ILMN_2907972	005310521	S	1845	GCACTACTCATGTTTTAACACCGGCTGCTCTACCCCACCTCTCTTTGACC	8	-	74215818-74215867	8qB3.3	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 (B3gnt3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]	2210008L19Rik	2210008L19Rik
Mus musculus	RefSeq	ILMN_216710	ILMN_216710	KRT79	NM_146063.1	NM_146063.1		223917	22164775	NM_146063.1	Krt79	NP_666175.1	ILMN_2674304	001170332	S	1681	TCAAGACCTCTAGCCGGAGATACTAGCAGCAAGGCTTTGAGAGTTGGGCC	15	-	101760129-101760153:101760154-101760178	15qF3	Mus musculus keratin 79 (Krt79), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC36907; BC031593	MGC36907; BC031593
Mus musculus	RefSeq	ILMN_248181	ILMN_248181	6430531B16RIK	NM_001033465.1	NM_001033465.1		381933	85701982	NM_001033465.1	6430531B16Rik	NP_001028637.1	ILMN_3000290	006420059	S	976	AGTCACTCAGACCTCGATCCTGAGCCCAACCGGAGCTCCTCACTGGTCAT	7	-	139823758-139823786:139823787-139823807	7qF4	Mus musculus RIKEN cDNA 6430531B16 gene (6430531B16Rik), mRNA.				Gm1093	Gm1093
Mus musculus	RefSeq	ILMN_210726	ILMN_210726	TCFEC	NM_031198.2	NM_031198.2		21426	142351379	NM_031198.2	Tcfec	NP_112475.1	ILMN_2608547	001740576	S	1625	CGACTAACAAATTTGGTGATAATTTCTTTTCCTTTGTCGGGTGGACATAC	6	-	16783485-16783534	6qA2	Mus musculus transcription factor EC (Tcfec), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	BB107417; TFEC; MGC107474	BB107417; TFEC; MGC107474
Mus musculus	Riken	ILMN_205115	ILMN_205115	CN1A	ri|E230002L23|PX00208B20|AK053931|1940					AK053931	Cn1a		ILMN_2570106	000990592	S	1804	GATCCACCTGTCTTTGCTTCTGGAGTGCTGGGACTAAAGGCACACATCAC										
Mus musculus	RefSeq	ILMN_192714	ILMN_255582	RDBP	NM_001045864.1	NM_001045864.1		27632	114052413	NM_001045864.1	Rdbp	NP_001039329.1	ILMN_1233513	006110048	S	1247	GTGCAGCTTAAAGTCAACATAGCCCGAAAACAGCCCATGCTGGACGCTGC	17	+	34990394-34990443	17qB1	Mus musculus RD RNA-binding protein (Rdbp), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D17H6S45; NELF-E; RD	D17H6S45; NELF-E; RD
Mus musculus	RefSeq	ILMN_192714	ILMN_255582	RDBP	NM_001045864.1	NM_001045864.1		27632	114052413	NM_001045864.1	Rdbp	NP_001039329.1	ILMN_1253999	001450309	S	1440	GTGCCTCATATGCCCCCAAGCTGGTCTCAGTAAAATCCTGGGGTAGAAGC	17	+	34990800-34990849	17qB1	Mus musculus RD RNA-binding protein (Rdbp), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D17H6S45; NELF-E; RD	D17H6S45; NELF-E; RD
Mus musculus	MEEBO	ILMN_218325	ILMN_218325	DNAJC7	scl39557.17.1_8	NM_019795.3			34328495	NM_019795.3	Dnajc7		ILMN_2694381	003840075	S	2153	TCGTTTTCTCAGTCGGGTGCCCTGTGTCTGTATGAGGGGTGAAGGAAAGG								Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	Riken	ILMN_204640	ILMN_204640	E130203E12RIK	ri|E130203E12|PX00092K08|AK053686|2562					AK053686	E130203E12Rik		ILMN_1242491	004280671	S	2159	AGGTGCAGAAGCCAAATCTCTCTGACCCAGCCCTTCCCATTTGTCCAGGG										
Mus musculus	MEEBO	ILMN_184348	ILMN_184348	4932415A06RIK	scl0074372.1_234				51765157	XM_357975	4932415A06Rik		ILMN_1224580	001400047	S	20	CTATCAGGGTTATTAACATTTCGGAGCTGAGATTGGGCTCATCCAGCACC										
Mus musculus	RefSeq	ILMN_218319	ILMN_256313	PCDH19	XM_975492.1	XM_975492.1		279653	94408163	XM_975492.1	Pcdh19	XP_980586.1	ILMN_2694311	006480603	S	3113	CCAATAGTGAGGAGCAAGACAAAAAGGCAGAGGAGAAAGTGAGCCTAAGG				XqE3	PREDICTED: Mus musculus protocadherin 19 (Pcdh19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218319	ILMN_256313	PCDH19	XM_975492.1	XM_975492.1		279653	94408163	XM_975492.1	Pcdh19	XP_980586.1	ILMN_2696829	002320300	S	3644	TCCAGAGGAGCCTGTACTGCGATACTGCTGTGAATGATGTCCTGAACACC				XqE3	PREDICTED: Mus musculus protocadherin 19 (Pcdh19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200224	ILMN_200224	LOC385989	XM_359026.1	XM_359026.1			38080997	XM_359026.1	LOC385989		ILMN_2538010	004540753	S	189	CCGGGATTCAGAAGGAAGGGGAGAGAGAAAGAAGGGCAGGTCCGAAGACC										
Mus musculus	RefSeq	ILMN_197554	ILMN_197554	LOC242039	XM_143249.3	XM_143249.3			38076546	XM_143249.3	LOC242039		ILMN_1253068	003140593	S	1218	TGCTCAGATGCAGGCCATACCAGTCAGAACAACAGAGACATCCCCCTCCC										
Mus musculus	RefSeq	ILMN_221414	ILMN_258869	RAP1A	NM_145541.4	NM_145541.4		109905	142365908	NM_145541.4	Rap1a	NP_663516.1	ILMN_2735253	002570167	S	1337	TTACTGTCAGATTAAATTACAGCTTTTATGGATGATTAAATTTTAGTACA	3	-	105531205-105531254	3qF2.2	Mus musculus RAS-related protein-1a (Rap1a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex that stimulates the exchange of guanyl nucleotides by a GTPase [goid 32045] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IDA]	AI848598; MGC102329; Rap1; G-22K; Krev-1	AI848598; MGC102329; Rap1; G-22K; Krev-1
Mus musculus	Riken	ILMN_203445	ILMN_203445	PPM1D	ri|E130303A03|PX00092P07|AK053727|2497					AK053727	Ppm1d		ILMN_1226504	006860053	S	2310	ACAGGGTCTCTCACATAAGCACAAGCCCTACCTCTGTGATGCCCGAGCGT						A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the removal of a serine- or threonine-bound phosphate group from a protein; action dependent on magnesium [goid 4724] [evidence ISS]		
Mus musculus	RefSeq	ILMN_191311	ILMN_310446	LOC677216	XR_031635.1	XR_031635.1		677216	149269251	XR_031635.1	LOC677216		ILMN_2486231	004290022	S	1319	CCGTCCCTCCGAAGCAGGAACACCATCTTTACCCTTGGCACTCGTGGTAC					PREDICTED: Mus musculus similar to vacuolar protein sorting 52 (LOC677216), misc RNA.					
Mus musculus	RefSeq	ILMN_191311	ILMN_310446	LOC677216	XR_031635.1	XR_031635.1		677216	149269251	XR_031635.1	LOC677216		ILMN_1240403	002600634	S	2884	CTCCAGCATGTGTTTATTGTAGACCTAGTCTGTTCCTGGTGGGCATCAGG					PREDICTED: Mus musculus similar to vacuolar protein sorting 52 (LOC677216), misc RNA.					
Mus musculus	RefSeq	ILMN_218932	ILMN_218932	D630023F18RIK	NM_175293.3	NM_175293.3		98303	142379576	NM_175293.3	D630023F18Rik	NP_780502.1	ILMN_2702102	002570053	S	1858	TCCCCTTCCAACAAGATGTCCTCCTGAAAACAGAAAGTCGGTTGGTGCTT	1	-	65154159-65154208	1qC2	Mus musculus RIKEN cDNA D630023F18 gene (D630023F18Rik), mRNA.				AI314969	AI314969
Mus musculus	RefSeq	ILMN_207474	ILMN_207474	PIBF1	NM_029320.2	NM_029320.2		52023	46852192	NM_029320.2	Pibf1	NP_083596.2	ILMN_3115640	006520561	A	1710	GTGTACGCTGTGCCCATGAGGAGGATCGGCTGGAAAGGCTGCAAGTTCAA	14	+	99536337-99536386	14qE2.2	Mus musculus progesterone immunomodulatory binding factor 1 (Pibf1), transcript variant 1, mRNA.				1700017E21Rik; 4933438D16Rik; 4930513H15Rik; 4933439E17Rik; Pibf1	1700017E21Rik; 4933438D16Rik; 4930513H15Rik; 4933439E17Rik; Pibf1
Mus musculus	RefSeq	ILMN_207474	ILMN_207474	PIBF1	NM_029320.2	NM_029320.2		52023	46852192	NM_029320.2	Pibf1	NP_083596.2	ILMN_3040816	001990494	I	2983	GACCTAGTGTTTGGTGTTGAAGAAAGCTGGAGCCTAACCCAGCCAGGCCC	14	+	99653424-99653430:99653431-99653473	14qE2.2	Mus musculus progesterone immunomodulatory binding factor 1 (Pibf1), transcript variant 1, mRNA.				1700017E21Rik; 4933438D16Rik; 4930513H15Rik; 4933439E17Rik; Pibf1	1700017E21Rik; 4933438D16Rik; 4930513H15Rik; 4933439E17Rik; Pibf1
Mus musculus	RefSeq	ILMN_195453	ILMN_320340	LOC100045019	XM_001473862.1	XM_001473862.1		100045019	149262640	XM_001473862.1	LOC100045019	XP_001473912.1	ILMN_1249684	003390241	S	1719	TCTTCCTTTTCACCCCTGGCGCTTGGCTGGCTTGGTTAAGTTCTAATAAA					PREDICTED: Mus musculus similar to Tubulin, gamma 2 (LOC100045019), mRNA.					
Mus musculus	RefSeq	ILMN_244917	ILMN_244917	PLEK2	NM_013738.1	NM_013738.1		27260	7305392	NM_013738.1	Plek2	NP_038766.1	ILMN_2855998	003180035	S	1280	GGAGTGAGACTGCTCAAAGTGGCTCCTCAGATGACAGCGGGGATGCGATG	12	-	79807770-79807819	12qC3	Mus musculus pleckstrin 2 (Plek2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]			
Mus musculus	RefSeq	ILMN_249730	ILMN_249730	OSM	NM_001013365.1	NM_001013365.1		18413	61656172	NM_001013365.1	Osm	NP_001013383.1	ILMN_2919411	006270600	S	2013	TCTCCCAGTGCCTAAAAGCCCTGTTTTGGGTCCTCGCTGCATGATGCTCC	11	+	4140770-4140819	11qA1	Mus musculus oncostatin M (Osm), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of meiosis [goid 45835] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]; The process of introducing a phosphate group to a tyrosine residue of a Stat1 protein [goid 42508] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42503] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a Stat5 protein [goid 42506] [evidence IDA]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISO]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196747	ILMN_196747	KLK1	NM_010639.7	NM_010639.7		16612	149363662	NM_010639.7	Klk1	NP_034769.4	ILMN_2760199	002760181	S	751	CCCAATGTGCCGGGTATCTACACCAGAGTTTTAAATTTCAACACCTGGAT				7qB4	Mus musculus kallikrein 1 (Klk1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	0610007D04Rik; mGk-6; Kal; Klk1b6; Klk6	0610007D04Rik; mGk-6; Kal; Klk1b6; Klk6
Mus musculus	MEEBO	ILMN_191536	ILMN_191536	9629553_1929	9629553_1929						9629553_1929		ILMN_2479942	002650196	S	3	TCTATGCCAACAAAACCATATATGGCCACATGCTATTTAAATGCACCAGA										
Mus musculus	RefSeq	ILMN_220059	ILMN_220059	OLFR676	NM_147095.1	NM_147095.1		259099	22128774	NM_147095.1	Olfr676	NP_667306.1	ILMN_1256438	006510243	S	679	TATGCTAGGATCTTATATGCCGTCTTTCATCTTCCTTCTCAAGATGCTCG	7	+	112184392-112184441	7qE3	Mus musculus olfactory receptor 676 (Olfr676), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR32-1	MOR32-1
Mus musculus	MEEBO	ILMN_209010	ILMN_209010	2900057D21RIK	scl45792.24_121				50881952	NM_145221	2900057D21Rik		ILMN_2608309	004850465	S	2189	TGTTGCTGCTTTTTGAGTTCTCATTTCCCTGGGATGTGGCACAGCGTATC										
Mus musculus	RefSeq	ILMN_239887	ILMN_239887	BECN1	NM_019584.2	NM_019584.2		56208	27764874	NM_019584.2	Becn1	NP_062530.2	ILMN_3090581	005270524	A	1250	CTGGACTGTGTGCAGCAGTTCAAAGAAGAGGTGGAAAAAGGAGAGACTCG	11	-	101105889-101105938	11qD	Mus musculus beclin 1 (coiled-coil, myosin-like BCL2-interacting protein) (Becn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISS]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IDA]; Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation [goid 16239] [evidence IGI]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IDA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	5430417M23Rik; MGC6843; 4921513J16Rik	5430417M23Rik; MGC6843; 4921513J16Rik
Mus musculus	RefSeq	ILMN_239887	ILMN_239887	BECN1	NM_019584.2	NM_019584.2		56208	27764874	NM_019584.2	Becn1	NP_062530.2	ILMN_3018758	000290497	I	787	GGCGGAGAGATTGGACCAGGAGGAAGCTCAGTACCAGCGGGAGTATAGTG	11	-	101110216-101110237:101111060-101111087	11qD	Mus musculus beclin 1 (coiled-coil, myosin-like BCL2-interacting protein) (Becn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISS]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IDA]; Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation [goid 16239] [evidence IGI]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IDA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IMP]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	5430417M23Rik; MGC6843; 4921513J16Rik	5430417M23Rik; MGC6843; 4921513J16Rik
Mus musculus	RefSeq	ILMN_185920	ILMN_246567	A530016O06RIK	NM_178767.2	NM_178767.2		319660	31343463	NM_178767.2	A530016O06Rik	NP_848882.1	ILMN_2689860	001070292	S	3006	GTATTCACTCTGATCTCTTTAGAAAACGCAAGTTCCAGGGGAATAGGAAC	12	+	37914345-37914394	12qA3	Mus musculus RIKEN cDNA A530016O06 gene (A530016O06Rik), mRNA.				AI790538	AI790538
Mus musculus	RefSeq	ILMN_220876	ILMN_225803	A230058J24RIK	XM_897533.2	XM_897533.2		243510	94377948	XM_897533.2	A230058J24Rik	XP_902626.1	ILMN_2728048	005560291	S	2235	CAGCGTAAGTGTGTGCCTAGAGAACAGGGCTGGGGACCTTGCGATCTCCA	6	+	83069408-83069457	6qC3	PREDICTED: Mus musculus RIKEN cDNA A230058J24 gene, transcript variant 2 (A230058J24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_192083	ILMN_236114	UBAC2	NM_026861.2	NM_026861.2		68889	90568035	NM_026861.2	Ubac2	NP_081137.2	ILMN_2484838	004890746	S	1684	CAGTGCTGGTGTGAGGTTCTAGAATGCCCCGTGATGCCTACCTGGGGTCA	14	+	122419787-122419836	14qE5	Mus musculus ubiquitin associated domain containing 2 (Ubac2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Phgdhl1; AW554959; 1190008A14Rik	Phgdhl1; AW554959; 1190008A14Rik
Mus musculus	RefSeq	ILMN_236114	ILMN_236114	UBAC2	NM_026861.2	NM_026861.2		68889	90568035	NM_026861.2	Ubac2	NP_081137.2	ILMN_2949605	002060719	S	2003	AGGCAGCCCCTGTGAGCAAGAGCAGCTGTAGGAATTGACGACTGTCCCGT	14	+	122420106-122420155	14qE5	Mus musculus ubiquitin associated domain containing 2 (Ubac2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Phgdhl1; AW554959; 1190008A14Rik	Phgdhl1; AW554959; 1190008A14Rik
Mus musculus	RefSeq	ILMN_217119	ILMN_217119	TMEM208	NM_025486.1	NM_025486.1		66320	13384905	NM_025486.1	Tmem208	NP_079762.1	ILMN_2853508	002470193	S	619	AACTGAGGCTGTAGGCTGCTGGGCACTGGTTGGCTCTGTTATGCTGCGTG	8	+	107852815-107852864	8qD3	Mus musculus transmembrane protein 208 (Tmem208), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700006C06Rik; MGC25457; 2610030K20Rik	1700006C06Rik; MGC25457; 2610030K20Rik
Mus musculus	MEEBO	ILMN_188490	ILMN_188490	C130065N10RIK	scl13693.1.1_207						C130065N10Rik		ILMN_2453120	006770471	S	7	GGTGCATGTGAGCCATTATCTTGTCTTATTGAATGGATCGATGCTGTTGA										
Mus musculus	RefSeq	ILMN_200693	ILMN_200693	GPR92	XM_355812.4	XM_355812.4		381810	149255424	XM_355812.4	Gpr92	XP_355812.2	ILMN_2539669	000940228	S	1129	CTACGGGCCAACTTGGTGAAGAACAGTATTCAGGACCGCGATCAGGTGCG	6	+	125032161-125032210	6qF2	PREDICTED: Mus musculus G protein-coupled receptor 92 (Gpr92), mRNA.					
Mus musculus	RefSeq	ILMN_220068	ILMN_220068	FABP9	NM_011598.2	NM_011598.2		21884	40254573	NM_011598.2	Fabp9	NP_035728.2	ILMN_1221705	006760767	S	487	CCACCACAAAGAACTTGCCGCTCAAGAAAGCCAGCCCCAGGGACAGTGAT	3	-	10193672-10193721	3qA1	Mus musculus fatty acid binding protein 9, testis (Fabp9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Perf; 1700007P10Rik; Tlbp; Perf15	Perf; 1700007P10Rik; Tlbp; Perf15
Mus musculus	RefSeq	ILMN_216904	ILMN_216904	GLT8D1	NM_029626.1	NM_029626.1		76485	21313215	NM_029626.1	Glt8d1	NP_083902.1	ILMN_1224678	002600646	S	1561	GCTGGGTAGAAGTCATAGATATCCAGATGACTACCACGGCTCCATCTGCC	14	+	31824974-31825023	14qB	Mus musculus glycosyltransferase 8 domain containing 1 (Glt8d1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI450005; 5430414N14Rik; 2410004H05Rik	AI450005; 5430414N14Rik; 2410004H05Rik
Mus musculus	RefSeq	ILMN_216904	ILMN_216904	GLT8D1	NM_029626.1	NM_029626.1		76485	21313215	NM_029626.1	Glt8d1	NP_083902.1	ILMN_2998630	002190687	S	1485	CTGGAAGACACACTATGTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCT	14	+	31824898-31824947	14qB	Mus musculus glycosyltransferase 8 domain containing 1 (Glt8d1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI450005; 5430414N14Rik; 2410004H05Rik	AI450005; 5430414N14Rik; 2410004H05Rik
Mus musculus	RefSeq	ILMN_216904	ILMN_216904	GLT8D1	NM_029626.1	NM_029626.1		76485	21313215	NM_029626.1	Glt8d1	NP_083902.1	ILMN_1259198	001400187	S	238	TGTCAGTGCGTGGCGGGATCCCCGGAGCGCCTCACCACGTCCCCATCACT	14	+	31815127-31815176	14qB	Mus musculus glycosyltransferase 8 domain containing 1 (Glt8d1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI450005; 5430414N14Rik; 2410004H05Rik	AI450005; 5430414N14Rik; 2410004H05Rik
Mus musculus	RefSeq	ILMN_216996	ILMN_216996	INPP4A	NM_172971.2	NM_172971.2		269180	126090748	NM_172971.2	Inpp4a	NP_766559.2	ILMN_1219696	005360273	S	2138	GGCTCTTTCTGAGCATAGCGTACCTGGTGACCAAATTGCGTTGCAAATAG	1	+	37460425-37460474	1qB	Mus musculus inositol polyphosphate-4-phosphatase, type I (Inpp4a), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a polyphosphate, the anion or salt of polyphosphoric acid [goid 6798] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 34597] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 3,4-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 16316] [evidence TAS]	D130048C09Rik; 9630012D15; 107kDa	D130048C09Rik; 9630012D15; 107kDa
Mus musculus	RefSeq	ILMN_214276	ILMN_216996	INPP4A	NM_172971.2	NM_172971.2		269180	126090748	NM_172971.2	Inpp4a	NP_766559.2	ILMN_2646260	000380689	S	1951	CACGAGCACGGCATGGCCCCGCAGGTCTTCACACAAGCCCTGGAGTGCAT	1	+	37455710-37455759	1qB	Mus musculus inositol polyphosphate-4-phosphatase, type I (Inpp4a), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a polyphosphate, the anion or salt of polyphosphoric acid [goid 6798] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 34597] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 3,4-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 16316] [evidence TAS]	D130048C09Rik; 9630012D15; 107kDa	D130048C09Rik; 9630012D15; 107kDa
Mus musculus	RefSeq	ILMN_213665	ILMN_232871	OLFR47	NM_146370.1	NM_146370.1		18346	22203776	NM_146370.1	Olfr47	NP_666482.1	ILMN_2639426	000110056	S	599	CAGCCTGTGTGTTCACTTTAGTGGGGCCCCTGTGCTTTGTACTAGTCTCC	6	+	43186207-43186256	6qB2.1	Mus musculus olfactory receptor 47 (Olfr47), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	IB12; MOR261-9	IB12; MOR261-9
Mus musculus	RefSeq	ILMN_216157	ILMN_216157	OLFR926	NM_146815.1	NM_146815.1		258811	22129226	NM_146815.1	Olfr926	NP_667026.1	ILMN_2667921	001780358	S	869	GGAACAAGGATGTAAAGACTGCTCTGAAAAAGATGGTTGGTAGAAGGCAG	9	+	38685631-38685680	9qA5.1	Mus musculus olfactory receptor 926 (Olfr926), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-8	MOR171-8
Mus musculus	MEEBO	ILMN_209308	ILMN_209308	2310003P10RIK	scl0003066.1_247	NM_175145.2			31541866	NM_175145.2	2310003P10Rik		ILMN_2594567	006900053	S	375	GGAGCTGGGGGTCTCGGACGTGCTGGGCTATGTAAACCCGGATCTGCTAA										
Mus musculus	RefSeq	ILMN_184897	ILMN_243230	RNF40	NM_172281.1	NM_172281.1		233900	26986594	NM_172281.1	Rnf40	NP_758485.1	ILMN_2622735	004780408	S	3837	GCAGGCATTCCAGGTAGAAGAGCTTTGCCCGTGCTCCAGCTAGCCTACAC	7	+	134746888-134746937	7qF3	Mus musculus ring finger protein 40 (Rnf40), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0661; AI848422; MGC19037	mKIAA0661; AI848422; MGC19037
Mus musculus	RefSeq	ILMN_216526	ILMN_259657	DDHD2	XM_911470.2	XM_911470.2		72108	94383268	XM_911470.2	Ddhd2	XP_916563.1	ILMN_2733492	002510243	S	1071	TGTAGTCCATGGGATTGGCCCAGCTTGCGATCTTCGTTTTCGAAGCATTG					PREDICTED: Mus musculus DDHD domain containing 2 (Ddhd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_214573	ILMN_214573	KIFC1	scl0016580.1_17	NM_016761.1			7949059	NM_016761.1	Kifc1		ILMN_2649408	006980397	S	1673	GCCCTGAGCAATAAGGAGTCCCACGTGCCTTACCGAAACAGAAAGCTCAC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence ISS]		
Mus musculus	MEEBO	ILMN_187761	ILMN_187761	HELZ	scl40784.34_153				50355942	NM_198298	Helz		ILMN_1232517	006550270	S	20	CCCCCCTTTTTTGTGATCACAGGATGCTGCGTTCTAAAACTTTCCGAGTT								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193561	ILMN_231444	LOC632997	XM_907316.3	XM_907316.3		632997	149274431	XM_907316.3	LOC632997	XP_912409.3	ILMN_2498330	006330687	S	208	ATTTATCCTGGAAATGGTTATACTGCGTACAATGAGAAGTTCCAGGGAGA					PREDICTED: Mus musculus similar to Ig H-chain (LOC632997), mRNA.					
Mus musculus	RefSeq	ILMN_211832	ILMN_260267	PHKG2	NM_026888.2	NM_026888.2		68961	142356245	NM_026888.2	Phkg2	NP_081164.1	ILMN_2619922	002810228	S	1126	ACTGTGCCTTCCGGCTCTATGGGCACTGGGTAAAGAAGGGTGAGCAGCAG	7	+	134726377-134726426	7qF3	Mus musculus phosphorylase kinase, gamma 2 (testis) (Phkg2), mRNA.	An enzyme complex that catalyzes the phosphorylation of phosphorylase b to form phosphorylase a [goid 5964] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: 4 ATP + 2 phosphorylase b = 4 ADP + phosphorylase a [goid 4689] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	1500017I02Rik	1500017I02Rik
Mus musculus	RefSeq	ILMN_222622	ILMN_222622	4930458A03RIK	XM_287481.4	XM_287481.4		330146	94375062	XM_287481.4	4930458A03Rik	XP_287481.1	ILMN_1259073	001980025	S	883	GTGGAAATTTTGTAAGTGTTAAACTCTACCCAAAAACAGTATGAGGGGAA	5	+	106793175-106793224	5qE5	PREDICTED: Mus musculus RIKEN cDNA 4930458A03 gene (4930458A03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_231846	ILMN_231846	PCDHA9	NM_138661.1	NM_138661.1		192161	21426884	NM_138661.1	Pcdha9	NP_619602.1	ILMN_2954889	002750470	S	181	CTTCACTACTCTGTCCCAGAGGAGGCCAAACACGGCACCTTCGTGGGCCG	18	+	37157714-37157763	18qB3	Mus musculus protocadherin alpha 9 (Pcdha9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209517	ILMN_209517	L3MBTL2	NM_145993.2	NM_145993.2		214669	31981869	NM_145993.2	L3mbtl2	NP_666105.2	ILMN_1256203	004220504	S	3204	TCCGCTAAAGATAGCCCACCCTGTGCAGAATCTAGGCCATGAAAGAGGCC	15	+	81515334-81515383	15qE1	Mus musculus l(3)mbt-like 2 (Drosophila) (L3mbtl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC31247; M4mbt; 4732493N06Rik	MGC31247; M4mbt; 4732493N06Rik
Mus musculus	Riken	ILMN_203005	ILMN_203005	5930434A13RIK	ri|5930434A13|PX00055J08|AK031231|2575					AK031231	5930434A13Rik		ILMN_2554008	000430608	S	449	ATGACTAGCAGGAGGAACGCGCCCGGCATCTGGGCTGGTGTGTGACAACT										
Mus musculus	RefSeq	ILMN_210492	ILMN_210492	OLFR432	NM_146716.1	NM_146716.1		258711	22129408	NM_146716.1	Olfr432	NP_666927.1	ILMN_3062713	001470753	I	808	GACAAGCTTATTGCCTTGGTATATACTTTGCTCACCCCTTTCTTCAACCC	1	+	175981313-175981362	1qH3	Mus musculus olfactory receptor 432 (Olfr432), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123596; MOR123-2	MGC123596; MOR123-2
Mus musculus	RefSeq	ILMN_210492	ILMN_210492	OLFR432	NM_146716.1	NM_146716.1		258711	22129408	NM_146716.1	Olfr432	NP_666927.1	ILMN_2606173	005080288	S	622	TGCAATCTTACTTTCATCTTGGGACTCTATGGAGGTATTGTGAGAGCTGT	1	+	175981127-175981176	1qH3	Mus musculus olfactory receptor 432 (Olfr432), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123596; MOR123-2	MGC123596; MOR123-2
Mus musculus	RefSeq	ILMN_210492	ILMN_210492	OLFR432	NM_146716.1	NM_146716.1		258711	22129408	NM_146716.1	Olfr432	NP_666927.1	ILMN_3140394	006060148	A	544	CCAGTGATGCAGTTGGCATGTGTGGACACTAGCTGGCATGCTCGGCTTTA	1	+	175981049-175981098	1qH3	Mus musculus olfactory receptor 432 (Olfr432), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123596; MOR123-2	MGC123596; MOR123-2
Mus musculus	RefSeq	ILMN_220804	ILMN_258848	BC029127	XM_001002839.1	XM_001002839.1		214368	94406047	XM_001002839.1	BC029127	XP_001002839.1	ILMN_2727146	006960446	S	1692	GAGTTACAGGAATGAATGCTTATATGAGAAAAACTTTTGTGAATAAAAAT	19	-	61172823-61172872	19qD3	PREDICTED: Mus musculus cDNA sequence BC029127 (BC029127), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_250418	ILMN_250418	D030074E01RIK	NM_029491.2	NM_029491.2		75964	119964701	NM_029491.2	D030074E01Rik	NP_083767.2	ILMN_3160672	001450537	S	2408	TTGCAGGTATCACGACGCGCCTGACTTCCGGTGCTACCACTCAGTTCACC	18	-	21004891-21004940	18qA2	Mus musculus RIKEN cDNA D030074E01 gene (D030074E01Rik), mRNA.				5033403J15Rik; mKIAA1012; AI845423	5033403J15Rik; mKIAA1012; AI845423
Mus musculus	Riken	ILMN_206130	ILMN_206130	C630031L12RIK	ri|C630031L12|PX00084J10|AK083258|2728					AK083258	C630031L12Rik		ILMN_1243660	000870152	S	1416	ACTCCAAAGCCAAAAGGAGTGGCGAGTTTCACCGCAAATGTGAATTATCG										
Mus musculus	RefSeq	ILMN_239099	ILMN_239099	SLC35A2	NM_078484.1	NM_078484.1		22232	17530970	NM_078484.1	Slc35a2	NP_511039.1	ILMN_2970345	001580653	S	1260	ACCAAGGTGAAGGGGTCGTAGCTGCTGGACTTGAAGATGCTGGCCTGTCT	X	+	7471323-7471333:7471334-7471372	XqA1.1	Mus musculus solute carrier family 35 (UDP-galactose transporter), member 2 (Slc35a2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IMP]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]; Catalysis of the transfer of a UDP-galactose from one side of the membrane to the other. UDP-galactose is a substance composed of galactose in glycosidic linkage with uridine diphosphate [goid 5459] [evidence IDA]; Catalysis of the transfer of a UDP-galactose from one side of the membrane to the other. UDP-galactose is a substance composed of galactose in glycosidic linkage with uridine diphosphate [goid 5459] [evidence IMP]	Ugalt; UGT; Sfc8; Had1; Had-1; AI327289	Ugalt; UGT; Sfc8; Had1; Had-1; AI327289
Mus musculus	RefSeq	ILMN_255507	ILMN_255507	LOC433416	NM_001034887.1	NM_001034887.1		433416	85702237	NM_001034887.1	LOC433416	NP_001030059.1	ILMN_2881591	005090025	S	3023	TGCTGGGGTTGGGGGTGGAGATCCAGGGTAGGAAAAAGATGAACACAAGC	2	+	29590844-29590893	2qB	Mus musculus similar to cis-Golgi matrix protein GM130 (LOC433416), mRNA.					
Mus musculus	RefSeq	ILMN_188784	ILMN_188784	USH1G	NM_176847.3	NM_176847.3		16470	133893269	NM_176847.3	Ush1g	NP_789817.1	ILMN_1223933	005420474	S	3029	CAGAGCCCCCAGGTACTGTTCTTTCTCACCTCTTCTGACTGTTTACTGCC	11	-	115178094-115178143	11qE2	Mus musculus Usher syndrome 1G homolog (human) (Ush1g), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Sans; js	Sans; js
Mus musculus	RefSeq	ILMN_194877	ILMN_260422	GPR124	NM_054044.1	NM_054044.1		78560	16905078	NM_054044.1	Gpr124	NP_473385.1	ILMN_2699390	006100709	S	5414	AGAAAACACATTTTAAAAGCTCTGGTTTTATACAATAGAATGTTTTCCAG	8	+	28233805-28233854	8qA2	Mus musculus G protein-coupled receptor 124 (Gpr124), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1531; Tem5; 8430414O08Rik; 9530074E10Rik	mKIAA1531; Tem5; 8430414O08Rik; 9530074E10Rik
Mus musculus	RefSeq	ILMN_194877	ILMN_260422	GPR124	NM_054044.1	NM_054044.1		78560	16905078	NM_054044.1	Gpr124	NP_473385.1	ILMN_1214180	005340273	S	5432	GCTCTGGTTTTATACAATAGAATGTTTTCCAGCAGATGCCTCTTTGTTTT	8	+	28233823-28233872	8qA2	Mus musculus G protein-coupled receptor 124 (Gpr124), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1531; Tem5; 8430414O08Rik; 9530074E10Rik	mKIAA1531; Tem5; 8430414O08Rik; 9530074E10Rik
Mus musculus	Riken	ILMN_204951	ILMN_204951	HGF	ri|D330021I23|PX00191L11|AK052289|1634					AK052289	Hgf		ILMN_1237666	005570079	S	1523	AGGCTTGGATCCCAAAGTGCCTGGAAAGCCAGCACCTGAGCCACGTTCTC							The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The series of molecular signals generated as a consequence of the hepatocyte growth factor receptor binding to one of its physiological ligands [goid 48012] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51450] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217731	ILMN_217731	RAB2A	NM_021518.3	NM_021518.3		59021	142350376	NM_021518.3	Rab2a	NP_067493.1	ILMN_1213883	003190735	S	1976	CACTGTGGTGGTTTTATCCTCTCGTTTTTCTCCCTTGGTCTAGAATGAAG	4	+	8534768-8534817	4qA1	Mus musculus RAB2A, member RAS oncogene family (Rab2a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	9330148M11Rik; C80220	9330148M11Rik; C80220
Mus musculus	RefSeq	ILMN_241817	ILMN_241817	BC040758	NM_001033364.1	NM_001033364.1		268663	85662396	NM_001033364.1	BC040758	NP_001028536.1	ILMN_3034303	002340112	I	3954	GCAGTGCTCTCAGGAAGGTCGGCAGGTGCGAGCGAACAGCAGAAAAAGAA	13	+	54746111-54746160	13qB1	Mus musculus cDNA sequence BC040758 (BC040758), mRNA.				PC-LKC; Gm624	PC-LKC; Gm624
Mus musculus	RefSeq	ILMN_241817	ILMN_241817	BC040758	NM_001033364.1	NM_001033364.1		268663	85662396	NM_001033364.1	BC040758	NP_001028536.1	ILMN_3108004	006020767	A	3260	GAGGCTGCAGTTCTCCACCAGCAAGGAGGATGTTGGTGCCAATATGGAGG	13	+	54742889-54742938	13qB1	Mus musculus cDNA sequence BC040758 (BC040758), mRNA.				PC-LKC; Gm624	PC-LKC; Gm624
Mus musculus	RefSeq	ILMN_217945	ILMN_257529	FKBP6	NM_033571.2	NM_033571.2		94244	133892617	NM_033571.2	Fkbp6	NP_291049.1	ILMN_2774172	004060170	S	1291	GGGTCAGTACAGATAGAAAGGCTTTGTATATTCTGTTGGGTTTTTTGAAG	5	-	135767627-135767676	5qG2	Mus musculus FK506 binding protein 6 (Fkbp6), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The modification of peptidyl-proline [goid 18208] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IDA]; Interacting selectively with the immunosuppressant FK506 [goid 5528] [evidence IDA]	36kDa; D5Ertd724e; AU017274; 1700008G22Rik	36kDa; D5Ertd724e; AU017274; 1700008G22Rik
Mus musculus	RefSeq	ILMN_211996	ILMN_211996	SERINC5	NM_172588.2	NM_172588.2		218442	40254229	NM_172588.2	Serinc5	NP_766176.1	ILMN_2652328	004860292	S	1606	CCTGTGAAAAGCTGACATCCCCTGGCTAGCTTAAGTAGGTCTGACAAAGC	13	+	93478189-93478238	13qC3	Mus musculus serine incorporator 5 (Serinc5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IDA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	A130038L21Rik; TPO1; C86123; AIGP3	A130038L21Rik; TPO1; C86123; AIGP3
Mus musculus	RefSeq	ILMN_211996	ILMN_211996	SERINC5	NM_172588.2	NM_172588.2		218442	40254229	NM_172588.2	Serinc5	NP_766176.1	ILMN_1255046	004810653	S	1279	GGCACCGTGTACAGCTACTCCTATTTCCACTTCGTCTTCTTCCTGGCTTC	13	+	93476154-93476203	13qC3	Mus musculus serine incorporator 5 (Serinc5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IDA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	A130038L21Rik; TPO1; C86123; AIGP3	A130038L21Rik; TPO1; C86123; AIGP3
Mus musculus	RefSeq	ILMN_211996	ILMN_211996	SERINC5	NM_172588.2	NM_172588.2		218442	40254229	NM_172588.2	Serinc5	NP_766176.1	ILMN_1239683	002320653	S	5235	GAAGCACCTGAAATTGACTAGCCTTTTCCTATGTAGAAAACTCAAACATG	13	+	93481818-93481867	13qC3	Mus musculus serine incorporator 5 (Serinc5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IDA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	A130038L21Rik; TPO1; C86123; AIGP3	A130038L21Rik; TPO1; C86123; AIGP3
Mus musculus	Riken	ILMN_205026	ILMN_205026	A430091O22RIK	ri|A430091O22|PX00138D01|AK040404|2896					AK040404	A430091O22Rik		ILMN_2569431	002100370	S	2807	CAGGCTGGGGCAAACCACCTCTCTGTAGTAAGCCGTCTCAGCATTCCCGA										
Mus musculus	MEEBO	ILMN_194545	ILMN_194545	9330180L10RIK	scl26033.1.1904_52						9330180L10Rik		ILMN_2507400	004780561	S	19	CGCTGCATAGGACTGTCCATCTGAATGAAGAGTGCACGCTGTTCCCCCGA										
Mus musculus	RefSeq	ILMN_209405	ILMN_209405	2700049P18RIK	NM_175382.2	NM_175382.2		108900	31341750	NM_175382.2	2700049P18Rik	NP_780591.1	ILMN_2876973	000150576	S	1687	AGCCATTATAGATGTTGTACCATGTGATCCGGGTAAAGTCAACCTTCATC	1	+	133436029-133436078	1qE4	Mus musculus RIKEN cDNA 2700049P18 gene (2700049P18Rik), mRNA.				MGC117955	MGC117955
Mus musculus	RefSeq	ILMN_209405	ILMN_209405	2700049P18RIK	NM_175382.2	NM_175382.2		108900	31341750	NM_175382.2	2700049P18Rik	NP_780591.1	ILMN_2876971	005670288	S	1947	TGTACAATCCTTTGCCTCAGGAGCTAACACCACAGACCTATAACCAGGCC	1	+	133436289-133436338	1qE4	Mus musculus RIKEN cDNA 2700049P18 gene (2700049P18Rik), mRNA.				MGC117955	MGC117955
Mus musculus	RefSeq	ILMN_213605	ILMN_213605	SFTPC	NM_011359.1	NM_011359.1		20389	6755479	NM_011359.1	Sftpc	NP_035489.1	ILMN_2638865	005490324	S	630	ACCGCAGCGGGACAGGAAAGACCCTCCGCAAAGGGTCTTTGTCAGACAAG	14	-	70920861-70920910	14qD2	Mus musculus surfactant associated protein C (Sftpc), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the surface tension of a liquid. Surface tension is the property that makes a liquid behave as if it had an elastic skin on its surface at the interface with a gas or an immiscible liquid [goid 50828] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]		Sftp-2; SP-C; Sftp2	Sftp-2; SP-C; Sftp2
Mus musculus	RefSeq	ILMN_195714	ILMN_218332	LTBP1	NM_206958.1	NM_206958.1		268977	46249420	NM_206958.1	Ltbp1	NP_996841.1	ILMN_1221564	006290463	S	5325	CCCAAGACTATGGGTGTCCTTAGATGACAGGGAAGTAAGGACTTGTGCAG	17	+	75790933-75790982	17qE2	Mus musculus latent transforming growth factor beta binding protein 1 (Ltbp1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Tgfb; 9830146M04; Ltbp-1; 9430031G15Rik	Tgfb; 9830146M04; Ltbp-1; 9430031G15Rik
Mus musculus	RefSeq	ILMN_218332	ILMN_218332	LTBP1	NM_206958.1	NM_206958.1		268977	46249420	NM_206958.1	Ltbp1	NP_996841.1	ILMN_2694475	001110544	S	89	CAAGGCAAGTTCATGGATACTAAGCTGATGTGTTTGTTGTTCTTTCTCTG	17	+	75578310-75578321:75578322-75578359	17qE2	Mus musculus latent transforming growth factor beta binding protein 1 (Ltbp1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Tgfb; 9830146M04; Ltbp-1; 9430031G15Rik	Tgfb; 9830146M04; Ltbp-1; 9430031G15Rik
Mus musculus	RefSeq	ILMN_212076	ILMN_212076	AATF	NM_019816.1	NM_019816.1		56321	9790012	NM_019816.1	Aatf	NP_062790.1	ILMN_3047301	005720722	I	1265	CTACCGAGTTCTTGGCAAACCGGAGCCAGTCCCTGAGCCTGTTGCAGAGA	11	-	84284082-84284131	11qC	Mus musculus apoptosis antagonizing transcription factor (Aatf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [evidence IMP]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of beta-amyloid [goid 42985] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4933415H02Rik; 5830465M17Rik; MGC35916; Che-1; Trb	4933415H02Rik; 5830465M17Rik; MGC35916; Che-1; Trb
Mus musculus	RefSeq	ILMN_212076	ILMN_212076	AATF	NM_019816.1	NM_019816.1		56321	9790012	NM_019816.1	Aatf	NP_062790.1	ILMN_3122864	006560053	A	880	GGTCATTGGTGGATCTTCAGGAAGAGTTGCTTTTCCAGTACCCAGACACG	11	-	84286591-84286640	11qC	Mus musculus apoptosis antagonizing transcription factor (Aatf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IMP]; Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [evidence IMP]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of beta-amyloid [goid 42985] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4933415H02Rik; 5830465M17Rik; MGC35916; Che-1; Trb	4933415H02Rik; 5830465M17Rik; MGC35916; Che-1; Trb
Mus musculus	RefSeq	ILMN_195852	ILMN_226402	SYTL2	NM_001040087.1	NM_001040087.1		83671	91718892	NM_001040087.1	Sytl2	NP_001035176.1	ILMN_1256018	004610132	S	445	GCTTCCAGGGACAGTCTCATTGTTCTCTTCTCATCAGGGGTCAGCCCCAT	7	+	97535935-97535984	7qE1	Mus musculus synaptotagmin-like 2 (Sytl2), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IPI]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence IDA]	Slp2-d; AI266830; Slp2-a; mKIAA1597; Slp2-c; Slp2; KIAA1597; Slp2-b	Slp2-d; AI266830; Slp2-a; mKIAA1597; Slp2-c; Slp2; KIAA1597; Slp2-b
Mus musculus	RefSeq	ILMN_218438	ILMN_218438	SLC4A1	NM_011403.1	NM_011403.1		20533	6755559	NM_011403.1	Slc4a1	NP_035533.1	ILMN_1227675	001230435	S	4318	CGCTCTTCCCCCACCGCCGTGCTTGGGAATAGGTTTTGCCAATAAACGTG	11	-	102210150-102210199	11qD	Mus musculus solute carrier family 4 (anion exchanger), member 1 (Slc4a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	 [goid 15380] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 5452] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	l11Jus51; Empb3; CD233; Ae1	l11Jus51; Empb3; CD233; Ae1
Mus musculus	MEEBO	ILMN_184829	ILMN_184829	IGSF10	scl12699.1.1_223				51708101	XM_143254	Igsf10		ILMN_2674966	000460524	S	8158	CACAGAACGTGCTTGGTGCCGATTATGCAACAACTTACATCCAGGTCCTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence ISA]	Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184829	ILMN_184829	IGSF10	scl12699.1.1_223				51708101	XM_143254	Igsf10		ILMN_2421947	007050398	S	10	TGGACAGAAGGCAATTGAAACTTAAAAGAGAATTGTAAGAACATTAAAAT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence ISA]	Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_207173	ILMN_207173	IIGP-PENDING	ri|F830009I11|PL00005C11|AK089702|2447					AK089702	Iigp-pending		ILMN_2585597	002320026	S	1685	GGGTTAGCCATGAGGGTGTTTAGTTTTGTCAACCCAACAGACTCTAGCGA										
Mus musculus	RefSeq	ILMN_217547	ILMN_217547	2310042D19RIK	NM_172417.1	NM_172417.1		74183	27369546	NM_172417.1	2310042D19Rik	NP_766005.1	ILMN_2957987	005130593	S	3774	GGTCCTTAGGATGGTGGATTACTCTGGCTGCTCAGAGGGGAACACAGCAC				4qE2	Mus musculus RIKEN cDNA 2310042D19 gene (2310042D19Rik), mRNA.				MGC143962; MGC143963	MGC143962; MGC143963
Mus musculus	RefSeq	ILMN_185426	ILMN_185426	TNFRSF14	NM_178931.2	NM_178931.2		230979	31341490	NM_178931.2	Tnfrsf14	NP_849262.1	ILMN_2426949	001300364	S	835	CGAGGAGGAGACAGCCTCCAACTGAACAAATTCTGGGTGACAAGACACCG	4	-	154296327-154296352:154296353-154296376	4qE2	Mus musculus tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator) (Tnfrsf14), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of alpha-beta T cell proliferation [goid 46642] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tnfrs14; Hvem; HveA; Atar; MGC123499; MGC123498	Tnfrs14; Hvem; HveA; Atar; MGC123499; MGC123498
Mus musculus	RefSeq	ILMN_213341	ILMN_244150	OSBPL5	NM_024289.2	NM_024289.2		79196	118130695	NM_024289.2	Osbpl5	NP_077251.1	ILMN_1245737	006110041	S	842	TTGAGCGCCCCTCCAAGAAGGACGGCTTCTGCTTCAAACTCTTCCACCCG	7	-	150896661-150896710	7qF5	Mus musculus oxysterol binding protein-like 5 (Osbpl5), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]		Obph1; AI462538; Osbp2; 1110006M06Rik; ORP5	Obph1; AI462538; Osbp2; 1110006M06Rik; ORP5
Mus musculus	RefSeq	ILMN_195435	ILMN_235810	PDLIM5	NM_019808.1	NM_019808.1		56376	12083690	NM_019808.1	Pdlim5	NP_062782.1	ILMN_2595115	000430095	S	1820	GCAAAAAACATGCTCATTCTGTGAATTTTTGAAAATCAGTGGTTCCAGGA	3	-	141905625-141905643:141905644-141905674	3qH1	Mus musculus PDZ and LIM domain 5 (Pdlim5), transcript variant 1, mRNA.	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI987914; Enh2; 1110001A05Rik; Enh1; LIM; Enh3; Enh; C87059	AI987914; Enh2; 1110001A05Rik; Enh1; LIM; Enh3; Enh; C87059
Mus musculus	RefSeq	ILMN_195435	ILMN_235810	PDLIM5	NM_019808.1	NM_019808.1		56376	12083690	NM_019808.1	Pdlim5	NP_062782.1	ILMN_2621862	002190601	S	1673	GTCGTGGATGTGAATTCCCCATAGAGGCTGGTGACATGTATCTGGAAGCT	3	-	141907898-141907947	3qH1	Mus musculus PDZ and LIM domain 5 (Pdlim5), transcript variant 1, mRNA.	Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI987914; Enh2; 1110001A05Rik; Enh1; LIM; Enh3; Enh; C87059	AI987914; Enh2; 1110001A05Rik; Enh1; LIM; Enh3; Enh; C87059
Mus musculus	RefSeq	ILMN_232878	ILMN_232878	CDCP1	NM_133974.3	NM_133974.3		109332	118129908	NM_133974.3	Cdcp1	NP_598735.2	ILMN_2987826	006550131	S	3405	GTACACCTGCGGGGAAGGTGAGAACCCAGCCAGAAGAGTATCTGCATGTA	9	-	123081797-123081846	9qF4	Mus musculus CUB domain containing protein 1 (Cdcp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AA409659; E030027H19Rik; 9030022E12Rik	AA409659; E030027H19Rik; 9030022E12Rik
Mus musculus	RefSeq	ILMN_190993	ILMN_232878	CDCP1	NM_133974.3	NM_133974.3		109332	118129908	NM_133974.3	Cdcp1	NP_598735.2	ILMN_1258262	004560711	S	2146	GCAGGAGGTGGAGCTCTGCTGCTGTTTGCCCTGGTACTCATCATCTGCTT	9	-	123084864-123084913	9qF4	Mus musculus CUB domain containing protein 1 (Cdcp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AA409659; E030027H19Rik; 9030022E12Rik	AA409659; E030027H19Rik; 9030022E12Rik
Mus musculus	RefSeq	ILMN_192002	ILMN_232878	CDCP1	NM_133974.3	NM_133974.3		109332	118129908	NM_133974.3	Cdcp1	NP_598735.2	ILMN_2484097	001070082	S	2152	GGTGGAGCTCTGCTGCTGTTTGCCCTGGTACTCATCATCTGCTTCGTGAA	9	-	123084858-123084907	9qF4	Mus musculus CUB domain containing protein 1 (Cdcp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AA409659; E030027H19Rik; 9030022E12Rik	AA409659; E030027H19Rik; 9030022E12Rik
Mus musculus	RefSeq	ILMN_219164	ILMN_219164	MUTED	NM_139063.1	NM_139063.1		17828	20532341	NM_139063.1	Muted	NP_620702.1	ILMN_1215090	001170746	S	288	CTTAAGAACTTGGAGAATACGATCCAGGAAACAAATGAGTGCCTGCTTCC	13	-	38711008-38711057	13qA3.3	Mus musculus muted (Muted), mRNA.		The process by which the anatomical structures of an otolith are generated and organized. Morphogenesis pertains to the creation of form [goid 32474] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1810074A19Rik; mu	1810074A19Rik; mu
Mus musculus	RefSeq	ILMN_219164	ILMN_219164	MUTED	NM_139063.1	NM_139063.1		17828	20532341	NM_139063.1	Muted	NP_620702.1	ILMN_2705128	001110095	S	1701	ATGTACGGCTGACTGTGAGAGCTTCGTTCTTGGCTCATGCTGAAGTGGGA	13	-	38694593-38694642	13qA3.3	Mus musculus muted (Muted), mRNA.		The process by which the anatomical structures of an otolith are generated and organized. Morphogenesis pertains to the creation of form [goid 32474] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1810074A19Rik; mu	1810074A19Rik; mu
Mus musculus	RefSeq	ILMN_219164	ILMN_219164	MUTED	NM_139063.1	NM_139063.1		17828	20532341	NM_139063.1	Muted	NP_620702.1	ILMN_2705131	003800601	S	1695	CGTAAATGTACGGCTGACTGTGAGAGCTTCGTTCTTGGCTCATGCTGAAG	13	-	38694599-38694648	13qA3.3	Mus musculus muted (Muted), mRNA.		The process by which the anatomical structures of an otolith are generated and organized. Morphogenesis pertains to the creation of form [goid 32474] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1810074A19Rik; mu	1810074A19Rik; mu
Mus musculus	RefSeq	ILMN_193529	ILMN_234462	ESCO1	NM_001081222.1	NM_001081222.1		77805	124487020	NM_001081222.1	Esco1	NP_001074691.1	ILMN_1240543	001430064	S	466	GTACTTTACTAAGCGAAGGAGATTAAATAGAAGCCACAAACCAACAAACT	18	-	10595788-10595837	18qA1	Mus musculus establishment of cohesion 1 homolog 1 (S. cerevisiae) (Esco1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	A930014I12Rik	A930014I12Rik
Mus musculus	RefSeq	ILMN_234462	ILMN_234462	ESCO1	NM_001081222.1	NM_001081222.1		77805	124487020	NM_001081222.1	Esco1	NP_001074691.1	ILMN_3063514	000730538	I	2026	GGAGGAGAAGCCTGCAGAGGTAAAACTGCAAGGGACCGATGCTGAAAGAC	18	-	10594228-10594277	18qA1	Mus musculus establishment of cohesion 1 homolog 1 (S. cerevisiae) (Esco1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	A930014I12Rik	A930014I12Rik
Mus musculus	RefSeq	ILMN_204987	ILMN_214460	RIF1	NM_175238.5	NM_175238.5		51869	146231943	NM_175238.5	Rif1	NP_780447.4	ILMN_1243796	006400075	S	2400	CACCGCAGAGATCTTCAGATTGGTCCAGAAAGAAGAAGGAGCCTCTAGGG				2qC1.1	Mus musculus Rap1 interacting factor 1 homolog (yeast) (Rif1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IDA]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IDA]; The pronucleus originating from the spermatozoa that was involved in fertilization [goid 1940] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6530403D07Rik; AW549474; AU016181; 5730435J01Rik; D2Ertd145e	6530403D07Rik; AW549474; AU016181; 5730435J01Rik; D2Ertd145e
Mus musculus	RefSeq	ILMN_214460	ILMN_214460	RIF1	NM_175238.5	NM_175238.5		51869	146231943	NM_175238.5	Rif1	NP_780447.4	ILMN_2668576	000510079	S	6671	GCCAAAGGATTTCTGTCCCCAGGATCACAGAGCTCTAAATTTAAGAGCCC				2qC1.1	Mus musculus Rap1 interacting factor 1 homolog (yeast) (Rif1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IDA]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IDA]; The pronucleus originating from the spermatozoa that was involved in fertilization [goid 1940] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6530403D07Rik; AW549474; AU016181; 5730435J01Rik; D2Ertd145e	6530403D07Rik; AW549474; AU016181; 5730435J01Rik; D2Ertd145e
Mus musculus	Riken	ILMN_204670	ILMN_204670	TRIM2	ri|9630060A22|PX00117K01|AK036353|1860					AK036353	Trim2		ILMN_1246964	003830392	S	1564	CTCACTGTAGTCGGTAGGAGGGTACTTTAGAAGGCAGGAGGCAGGCGAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]		
Mus musculus	RefSeq	ILMN_199043	ILMN_199043	LOC210583	XM_142341.2	XM_142341.2			38090581	XM_142341.2	LOC210583		ILMN_1220955	006840605	S	1825	GGAGAGAATCCTTACGAATGTAATTGATGCAGGAAGTTTGGCACATCAGC										
Mus musculus	RefSeq	ILMN_220209	ILMN_220209	2610101N10RIK	NM_026476.1	NM_026476.1		67958	46358330	NM_026476.1	2610101N10Rik	NP_080752.1	ILMN_2719131	006660553	S	806	CCTGGCTCACATGATGTAGGAGATCCCAGCACTACAAATTTATACCTTGG	9	-	95390674-95390674:95391510-95391558	9qE3.3	Mus musculus RIKEN cDNA 2610101N10 gene (2610101N10Rik), mRNA.		Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220209	ILMN_220209	2610101N10RIK	NM_026476.1	NM_026476.1		67958	46358330	NM_026476.1	2610101N10Rik	NP_080752.1	ILMN_1252490	003830707	S	3447	GTGACTTAGACACATAATACAGATGTCTTCCCCCCTTTTGTAGCTTTGAC	9	-	95361420-95361469	9qE3.3	Mus musculus RIKEN cDNA 2610101N10 gene (2610101N10Rik), mRNA.		Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213504	ILMN_213504	BC038925	NM_177878.2	NM_177878.2		330216	142368327	NM_177878.2	BC038925	NP_808546.1	ILMN_2637733	003780441	S	905	CCGGCGTCAGTTGGTCCGGGAGACCTAGAGGACACAGTCAAGACAAGCAA	5	+	138636446-138636495	5qG2	Mus musculus cDNA sequence BC038925 (BC038925), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC49416	MGC49416
Mus musculus	RefSeq	ILMN_200891	ILMN_200891	LOC384632	XM_357755.1	XM_357755.1			38086872	XM_357755.1	LOC384632		ILMN_2540367	004900576	S	87	GTGGAGCTTGGCGTGTTGTGACTGTAGTCAAGACAGGTATGGCCAGTCTT										
Mus musculus	Riken	ILMN_206380	ILMN_206380	A930006B21RIK	ri|A930006B21|PX00065M16|AK080706|1312					AK080706	A930006B21Rik		ILMN_1255162	007320333	S	1024	TCTGTAGAGGATTCAGTGGGTTATAGGGGAGTCTGTGCAAGCCCCTGCTC										
Mus musculus	Riken	ILMN_203384	ILMN_203384	4932410M19RIK	ri|4932410M19|PX00017O23|AK029954|3960					AK029954	4932410M19Rik		ILMN_1218569	001230021	S	3802	GTGCAAGTGAGTGTAGTTGCTTATGGAGGCCACCAGCATTGAGTCCCATG										
Mus musculus	RefSeq	ILMN_199322	ILMN_255456	LOC674004	XM_001006879.1	XM_001006879.1		674004	94412057	XM_001006879.1	LOC674004	XP_001006879.1	ILMN_1226921	003450639	S	125	GAACACATACTGGAGAGAAACCCTATGAATGTAACCAGTGTGGCAGAGCC					PREDICTED: Mus musculus similar to gonadotropin inducible ovarian transcription factor 2 (LOC674004), mRNA.					
Mus musculus	RefSeq	ILMN_200275	ILMN_239701	ZCWPW1	NM_001005426.1	NM_001005426.1		381678	53749215	NM_001005426.1	Zcwpw1	NP_001005426.1	ILMN_1222627	001570600	S	1280	CATAGCGATGGCTCACAGGGCAGAACAGACCAGTATTCAGGAGCGGGTTA	5	+	138241253-138241302	5qG2	Mus musculus zinc finger, CW type with PWWP domain 1 (Zcwpw1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm1053; MGC76794	Gm1053; MGC76794
Mus musculus	RefSeq	ILMN_239701	ILMN_239701	ZCWPW1	NM_001005426.1	NM_001005426.1		381678	53749215	NM_001005426.1	Zcwpw1	NP_001005426.1	ILMN_2982316	002230154	S	1908	GACATTGGAGAGCCAGAAGAGAGAGGGGAGATGCAGCAGAGAGGCAGCTC	5	+	138252059-138252108	5qG2	Mus musculus zinc finger, CW type with PWWP domain 1 (Zcwpw1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm1053; MGC76794	Gm1053; MGC76794
Mus musculus	Riken	ILMN_205799	ILMN_205799	E330037N20RIK	ri|E330037N20|PX00318N04|AK087894|1154					AK087894	E330037N20Rik		ILMN_1233755	004560102	S	895	CAGGGGCCTTCTGTCTCACTCGTCGCAGCCCAAGTCTTCTTGTGTGGAAG										
Mus musculus	RefSeq	ILMN_216385	ILMN_216385	FSHR	NM_013523.2	NM_013523.2		14309	31980788	NM_013523.2	Fshr	NP_038551.2	ILMN_1228881	001940424	S	2045	CCCACAACTTCCACTCCAGAAAGAATCCCTGTTCCTCGGCTCCCAGAGTC	17	-	89384557-89384606	17qE5	Mus musculus follicle stimulating hormone receptor (Fshr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]	FSH-R	FSH-R
Mus musculus	RefSeq	ILMN_216385	ILMN_216385	FSHR	NM_013523.2	NM_013523.2		14309	31980788	NM_013523.2	Fshr	NP_038551.2	ILMN_2736929	007150132	S	751	GTCTATTCCCTGCCCAACCATGGCTTAGAAAATCTGAAGAAGTTGAGGGC	17	-	89387880-89387929	17qE5	Mus musculus follicle stimulating hormone receptor (Fshr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]	FSH-R	FSH-R
Mus musculus	RefSeq	ILMN_216385	ILMN_216385	FSHR	NM_013523.2	NM_013523.2		14309	31980788	NM_013523.2	Fshr	NP_038551.2	ILMN_2932141	006040767	S	2259	GGTATGTGCATGGCAGATAGGTCAGGGACCATTAATATCTCATGTGACTC	17	-	89384343-89384392	17qE5	Mus musculus follicle stimulating hormone receptor (Fshr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]	FSH-R	FSH-R
Mus musculus	RefSeq	ILMN_218681	ILMN_218681	EHD2	NM_153068.2	NM_153068.2		259300	55742710	NM_153068.2	Ehd2	NP_694708.2	ILMN_2810645	000670431	S	897	CAAGGTGGTGGGCACGCCTGAGGTCCTTCGCGTCTACATTGGCTCCTTCT	7	-	15116153-15116202	7qA2	Mus musculus EH-domain containing 2 (Ehd2), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IDA]	MGC25606; C130052H20Rik; MGC38650; BC027084	MGC25606; C130052H20Rik; MGC38650; BC027084
Mus musculus	RefSeq	ILMN_196053	ILMN_253024	D630045J12RIK	XM_986853.2	XM_986853.2		330286	149255006	XM_986853.2	D630045J12Rik	XP_991947.2	ILMN_2521193	002810431	S	7771	TGTCACAACCAAAGGTGGAGTGGAGTGTGGCATGCAGGCTCTGTGGGGGC				6qB1	PREDICTED: Mus musculus RIKEN cDNA D630045J12 gene (D630045J12Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_210359	ILMN_210359	FGF22	NM_023304.1	NM_023304.1		67112	12963626	NM_023304.1	Fgf22	NP_075793.1	ILMN_2604814	001240019	S	115	TCCACTCACTTTTTCCTGCGTGTGGACCTTGGTGGTCGGGTGCAGGGGAC	10	+	79217978-79218027	10qC1	Mus musculus fibroblast growth factor 22 (Fgf22), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	2210414E06Rik; FGF-22	2210414E06Rik; FGF-22
Mus musculus	RefSeq	ILMN_210359	ILMN_210359	FGF22	NM_023304.1	NM_023304.1		67112	12963626	NM_023304.1	Fgf22	NP_075793.1	ILMN_1245714	000020373	S	310	TGTAGGTTCCGGGAGCGCATCGAGGAGAACGGCTACAACACATACGCCTC	10	+	79219527-79219576	10qC1	Mus musculus fibroblast growth factor 22 (Fgf22), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	2210414E06Rik; FGF-22	2210414E06Rik; FGF-22
Mus musculus	RefSeq	ILMN_197836	ILMN_197836	LOC381028	XM_354939.1	XM_354939.1			38078746	XM_354939.1	LOC381028		ILMN_1233512	006760072	S	429	GGATGTATTGAAACAGGAGCTGGGAACAAGTCTGGAGCCTTCAAGAGGCC										
Mus musculus	RefSeq	ILMN_217604	ILMN_217604	CCR5	NM_009917.2	NM_009917.2		12774	31542355	NM_009917.2	Ccr5	NP_034047.2	ILMN_2685393	001780324	S	1477	TGCCATAAAGTCGCTTCTTGCTGTCTATGGATGTGCCTGACTGCCAACAG	9	+	10435-10484	9qF4	Mus musculus chemokine (C-C motif) receptor 5 (Ccr5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IDA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence ISO]	Cmkbr5; AM4-7; CD195	Cmkbr5; AM4-7; CD195
Mus musculus	RefSeq	ILMN_217604	ILMN_217604	CCR5	NM_009917.2	NM_009917.2		12774	31542355	NM_009917.2	Ccr5	NP_034047.2	ILMN_2888191	002120397	S	2341	CCACTCTGTTGCTCAGCTGGCGTCAAGCTCACGATCCTCCTGCTTACATC	9	+	11299-11348	9qF4	Mus musculus chemokine (C-C motif) receptor 5 (Ccr5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IDA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence ISO]	Cmkbr5; AM4-7; CD195	Cmkbr5; AM4-7; CD195
Mus musculus	RefSeq	ILMN_196025	ILMN_235920	1700021K02RIK	NM_001017407.1	NM_001017407.1		65971	63079692	NM_001017407.1	1700021K02Rik	NP_001017407.1	ILMN_2651010	003130360	S	611	CCAGCCAAAGCCCGATGAGGTTGGTGTTGCACAAAGAATGGAGCCTAGAA	10	+	60643124-60643173	10qB4	Mus musculus RIKEN cDNA 1700021K02 gene (1700021K02Rik), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a spermatid cell [goid 48515] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Titest; Spatial; AI428928	Titest; Spatial; AI428928
Mus musculus	Riken	ILMN_204971	ILMN_204971	GPR37, ETBR-LP-1, GPCR	ri|A930017K23|PX00066I07|AK044508|3037					AK044508	GPR37, ETBR-LP-1, GPCR		ILMN_1213461	002000367	S	2584	CCTGGCTGGAGAGCAGGCAGATGGATGAGTGAGACTTTTACCTCCAAATC										
Mus musculus	Riken	ILMN_202527	ILMN_202527	2310032M22RIK	ri|2310032M22|ZX00081B08|AK009582|828					AK009582	2310032M22Rik		ILMN_2550291	000130088	S	450	TCATCAGCTTTACGACACAGTTAGGAGCTGTAGGAATCACCAAGGGCAGC										
Mus musculus	RefSeq	ILMN_210369	ILMN_210369	EIF3S1	NM_144545.2	NM_144545.2		78655	124244039	NM_144545.2	Eif3s1	NP_653128.2	ILMN_2832228	005090475	S	5071	TCTAAGGTCTCAGCCAGGGACCACAGGAGAGAATCAACTGAGTCCATTGG	2	+	121881992-121882041	2qE5	Mus musculus eukaryotic translation initiation factor 3, subunit 1 alpha (Eif3s1), mRNA.				C78575; eIF3-p35; 2700079K05Rik; eIF3-alpha; AA409117; 1810016I04Rik; AA409446	C78575; eIF3-p35; 2700079K05Rik; eIF3-alpha; AA409117; 1810016I04Rik; AA409446
Mus musculus	RefSeq	ILMN_214286	ILMN_214286	DCLK3	NM_172928.3	NM_172928.3		245038	146198679	NM_172928.3	Dclk3	NP_766516.1	ILMN_1245352	005700189	S	2874	CAGGAGTGTGCTTCACATCGCTCAAGCTCCCCCACACAATGAATGAGGTG				9qF3	Mus musculus doublecortin-like kinase 3 (Dclk3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	C730036H08; Dcamkl3; BC056929	C730036H08; Dcamkl3; BC056929
Mus musculus	RefSeq	ILMN_188586	ILMN_188586	V1RD20	NM_207546.1	NM_207546.1		404289	46430543	NM_207546.1	V1rd20	NP_997429.1	ILMN_2453946	007050678	S	799	CACCAATTCCTGAGGCATTGCAGTGAAGTTCTGGTTGTAGGTTTCCCTAC	7	+	24769929-24769978	7qA3	Mus musculus vomeronasal 1 receptor, D20 (V1rd20), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194569	ILMN_194569	4632419K20RIK	scl30889.13.1_25				39930594	NM_199009	4632419K20Rik		ILMN_1249600	001470113	S	14	GAATGAGACTTTGTCTTTATACCAATGTAGCTTGGGCTAATGGACGGAAC										
Mus musculus	Riken	ILMN_206065	ILMN_206065	D330012P07RIK	ri|D330012P07|PX00190P18|AK052245|2617					AK052245	D330012P07Rik		ILMN_2577286	000450674	S	2353	ACGGTTCTAGAGTCTGGGATGTCCATGAGATGATGCTGGCATATGGTGAG										
Mus musculus	RefSeq	ILMN_229747	ILMN_229747	9130211I03RIK	NM_030060.1	NM_030060.1		381319	47058955	NM_030060.1	9130211I03Rik	NP_084336.1	ILMN_2930552	007100753	S	389	TGTCTACCACGATGACACCCCAGCTCACTCCTCCTTTGTCCGGCTCGGAA	1	+	192809235-192809248:192809249-192809284	1qH6	Mus musculus RIKEN cDNA 9130211I03 gene (9130211I03Rik), mRNA.				Snft	Snft
Mus musculus	Riken	ILMN_207042	ILMN_207042	5830431I07RIK	ri|5830431I07|PX00039A13|AK077773|3568					AK077773	5830431I07Rik		ILMN_2584598	002630326	S	3425	CTTTGCCTGACAAAACTGAAGTAGAGAGGTTGAGCCAGCCACTGCGGCTC										
Mus musculus	RefSeq	ILMN_193420	ILMN_257470	NRK	NM_013724.1	NM_013724.1		27206	7305326	NM_013724.1	Nrk	NP_038752.1	ILMN_1220907	006480577	S	5126	TTCACAATAAATACACAACTGAAGACCAATTGTGACTTTTTTCCAGCCCC	X	+	135542228-135542277	XqF1	Mus musculus Nik related kinase (Nrk), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity in response to phosphorylation by a member of the JUN kinase kinase kinase (JNKKK) family, or another upstream kinase. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress [goid 7256] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]	Nesk; AV168563; AA409510; AI225895; AA407323; AW538185	Nesk; AV168563; AA409510; AI225895; AA407323; AW538185
Mus musculus	MEEBO	ILMN_185639	ILMN_185639	C730026J16	scl0331006.2_45						C730026J16		ILMN_1251984	005910672	S	20	TATTAACATGACTGTCAACATTGCCTTCAGAAGTCTGCTTGCCCTACAAG										
Mus musculus	RefSeq	ILMN_210682	ILMN_256026	FCRL1	NM_153090.1	NM_153090.1		229499	23346512	NM_153090.1	Fcrl1	NP_694730.1	ILMN_1231858	006980440	S	486	TTTTATCATGAGAGCATCATCCTGGGGAACAGTTCAGCACCCTCTGGAGG	3	+	87189075-87189124	3qF1	Mus musculus Fc receptor-like 1 (Fcrl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	A230020G22Rik; mIFGP1; FcRH1S; Fcrh1; mBXMH1b; moFcRH1S; FcRH1L; IFGP1; moFcRH1L; BXMAS1; moFcRH1; BXMAS1-like; mBXMH1	A230020G22Rik; mIFGP1; FcRH1S; Fcrh1; mBXMH1b; moFcRH1S; FcRH1L; IFGP1; moFcRH1L; BXMAS1; moFcRH1; BXMAS1-like; mBXMH1
Mus musculus	RefSeq	ILMN_244664	ILMN_244664	GORASP1	NM_028976.2	NM_028976.2		74498	118130573	NM_028976.2	Gorasp1	NP_083252.1	ILMN_2962511	006370435	S	2451	GTGGGGTGAAACGGAGGCTGATGCTGTTTCAAGTATGAACCCCCAGATGG	9	-	119835773-119835822	9qF4	Mus musculus golgi reassembly stacking protein 1 (Gorasp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	P65; GRASP65; GOLPH5; 5430411C10Rik	P65; GRASP65; GOLPH5; 5430411C10Rik
Mus musculus	RefSeq	ILMN_190654	ILMN_244664	GORASP1	NM_028976.2	NM_028976.2		74498	118130573	NM_028976.2	Gorasp1	NP_083252.1	ILMN_1235664	000730292	S	3237	CCTGCAGCTTCACGGGCTGGACCATTTGTCTGAATGTAAATGACCTTGGG	9	-	119834987-119835036	9qF4	Mus musculus golgi reassembly stacking protein 1 (Gorasp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	P65; GRASP65; GOLPH5; 5430411C10Rik	P65; GRASP65; GOLPH5; 5430411C10Rik
Mus musculus	RefSeq	ILMN_219531	ILMN_244664	GORASP1	NM_028976.2	NM_028976.2		74498	118130573	NM_028976.2	Gorasp1	NP_083252.1	ILMN_2710103	000630546	S	2724	GCCCCTATGGAGGAGTTTACCCCAGCATGGTTGTAATTTTTTCCCCAGCT	9	-	119835500-119835549	9qF4	Mus musculus golgi reassembly stacking protein 1 (Gorasp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	P65; GRASP65; GOLPH5; 5430411C10Rik	P65; GRASP65; GOLPH5; 5430411C10Rik
Mus musculus	RefSeq	ILMN_197619	ILMN_197619	LOC380949	XM_354858.1	XM_354858.1			38076887	XM_354858.1	LOC380949		ILMN_1256793	003060017	S	647	GGTTCCTTCAAAGTGCAGGGCTCAGACATCCATGGTGGTTCATCACAAGT										
Mus musculus	MEEBO	ILMN_187188	ILMN_187188	4930505N22RIK	scl0075056.1_241						4930505N22Rik		ILMN_2441929	002450593	S	15	AGACCAAACTGGCCTCCAACTTAGACCTGCCTGAAATACACATTGAGTTC										
Mus musculus	RefSeq	ILMN_184894	ILMN_184894	ZFY1	NM_009570.3	NM_009570.3		22767	142350557	NM_009570.3	Zfy1	NP_033596.2	ILMN_1227623	003420576	S	2635	GCAGGCATCCTTGTTCACATCCAATATCATGAATTTGTCAAGTGAATATA	Y	-	61750-61799	YqA1	Mus musculus zinc finger protein 1, Y linked (Zfy1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfy-1	Zfy-1
Mus musculus	RefSeq	ILMN_184894	ILMN_184894	ZFY1	NM_009570.3	NM_009570.3		22767	142350557	NM_009570.3	Zfy1	NP_033596.2	ILMN_1224484	004260646	S	44	CAGGCATTCTGGGAACGGAAAGACTGGTGAGCATCAAACGGTCGTTACTC	Y	-	133759-133808	YqA1	Mus musculus zinc finger protein 1, Y linked (Zfy1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfy-1	Zfy-1
Mus musculus	RefSeq	ILMN_217457	ILMN_217457	SNF8	NM_033568.2	NM_033568.2		27681	141802129	NM_033568.2	Snf8	NP_291046.1	ILMN_2683414	004890341	S	685	TGAAATCAAAACCAGTCTTAAATGGGAGACGGAGCGAGCACGGCAAGTGC	11	+	95907617-95907666	11qD	Mus musculus SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) (Snf8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISO]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]	RP23-235J5.2; MGC7335; D11Moh34	RP23-235J5.2; MGC7335; D11Moh34
Mus musculus	RefSeq	ILMN_199919	ILMN_234777	LOC545683	XM_620107.4	XM_620107.4		545683	149253166	XM_620107.4	LOC545683	XP_620107.1	ILMN_1243955	001580424	S	204	GAAAGGCCTGAAGAAGATGCAGGCCATCAACGCAAAGGCAGCGAGTGCAC	4	-	133194396-133194445	4qD3	PREDICTED: Mus musculus similar to ribosomal protein (LOC545683), mRNA.					
Mus musculus	RefSeq	ILMN_226809	ILMN_226809	EG629734	NM_001037936.2	NM_001037936.2		629734	142364146	NM_001037936.2	EG629734	NP_001033025.1	ILMN_3162417	005050139	S	2383	CTTGGCGCAGTTTCTTGGTGGCTTCCGTTTTACAAGGCCAGCAGTTAGTC	14	+	80358337-80358386	14qD3	Mus musculus predicted gene, EG629734 (EG629734), mRNA.					
Mus musculus	RefSeq	ILMN_184761	ILMN_234057	OLFML2A	NM_172854.2	NM_172854.2		241327	142378168	NM_172854.2	Olfml2a	NP_766442.1	ILMN_1232604	005050373	S	2185	GGGCTATCCCTAGCAACTCTTGCAATTGATATAAGTATCGTTTGGGGGTG	2	+	38815881-38815930	2qB	Mus musculus olfactomedin-like 2A (Olfml2a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]		Interacting selectively with a component of the extracellular matrix [goid 50840] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	mFLJ00237; 4932431K08Rik; FLJ00237	mFLJ00237; 4932431K08Rik; FLJ00237
Mus musculus	RefSeq	ILMN_200128	ILMN_200128	LOC385614	XM_358789.1	XM_358789.1			38080557	XM_358789.1	LOC385614		ILMN_1230295	003130491	S	2003	GTGCCCTTACTCGGTGGAGTCATGGACTCATTATATGGACCAGGTTGGCC										
Mus musculus	RefSeq	ILMN_201558	ILMN_201558	RPL30	NM_009083.2	NM_009083.2		19946	42476346	NM_009083.2	Rpl30	NP_033109.1	ILMN_2878424	005290452	S	35	TGTTGGTGAGTGAGCTCTGCGGGGTAAACGATTAGGCGGCTCGGGGAGCT	15	-	34387727-34387776	15qB3.1	Mus musculus ribosomal protein L30 (Rpl30), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC106425; MGC107559	MGC106425; MGC107559
Mus musculus	RefSeq	ILMN_201558	ILMN_201558	RPL30	NM_009083.2	NM_009083.2		19946	42476346	NM_009083.2	Rpl30	NP_033109.1	ILMN_2878430	007320608	S	118	TCCTCTCTTCTGTCCTCTGTGTATGCTAGGTTGGGGGTTGTCCCGCACCT	15	-	34387644-34387693	15qB3.1	Mus musculus ribosomal protein L30 (Rpl30), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC106425; MGC107559	MGC106425; MGC107559
Mus musculus	RefSeq	ILMN_209800	ILMN_241311	CACNG7	NM_133189.3	NM_133189.3		81904	148540002	NM_133189.3	Cacng7	NP_573452.3	ILMN_2599327	004490424	S	505	CAGTACTTTCACTATCGCTACGGGTGGTCCTTTGCCTTCGCTGCTTCCTC				7qA1	Mus musculus calcium channel, voltage-dependent, gamma subunit 7 (Cacng7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]		
Mus musculus	Riken	ILMN_204209	ILMN_204209	9530079E12RIK	ri|9530079E12|PX00114C04|AK035633|1853					AK035633	9530079E12Rik		ILMN_1221480	003780288	S	1699	GCAGTTGAACAGTCTCAGAACTCAGGATGCAGAGGTAGGTGGATCTCTGC										
Mus musculus	Riken	ILMN_201642	ILMN_201642	1110034O24RIK	ri|1110034O24|R000017B24|AK004102|821					AK004102	1110034O24Rik		ILMN_1233522	001110563	S	713	GGGCTCCAAGGTCTATCCATCTGTTACTGTGCTGTGCTGGGGACTAGCGC										
Mus musculus	RefSeq	ILMN_214692	ILMN_214692	ANO5	NM_177694.5	NM_177694.5		233246	118130460	NM_177694.5	Ano5	NP_808362.2	ILMN_1219128	004390139	S	3065	GAGGTTGGCAGTGTGCTATCAGAAGAGAATATAGGCAGGGTGATCCCAGG	7	+	58849359-58849408	7qB5	Mus musculus anoctamin 5 (Ano5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			Gdd1; 9330162L24	Gdd1; 9330162L24
Mus musculus	RefSeq	ILMN_223150	ILMN_223150	MXRA8	NM_024263.3	NM_024263.3		74761	31982601	NM_024263.3	Mxra8	NP_077225.3	ILMN_2759952	003940435	S	968	TTGAGCCACCAGCTCGTGCTTCTCCTGGCAATGGGTCTGGTCACAGCAGT	4	+	155216179-155216228	4qE2	Mus musculus matrix-remodelling associated 8 (Mxra8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI131686; MGC3047; 1700095D18Rik; 1200013A08Rik	AI131686; MGC3047; 1700095D18Rik; 1200013A08Rik
Mus musculus	RefSeq	ILMN_223150	ILMN_223150	MXRA8	NM_024263.3	NM_024263.3		74761	31982601	NM_024263.3	Mxra8	NP_077225.3	ILMN_2927638	001230672	S	1711	TCCACCAAATGCAAAGTCCCTCGTGGCCTCTTACTGCTAGGGTCAGGAAG	4	+	155217737-155217786	4qE2	Mus musculus matrix-remodelling associated 8 (Mxra8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI131686; MGC3047; 1700095D18Rik; 1200013A08Rik	AI131686; MGC3047; 1700095D18Rik; 1200013A08Rik
Mus musculus	MEEBO	ILMN_216559	ILMN_216559	2900090M10RIK	scl073073.3_35	XM_131769.3			38078937	XM_131769.3	2900090M10Rik		ILMN_1260170	006770725	S	937	TGGAGAAGGCGCAAGCCCGAGTCCGTGAGCTGGAGAACCACTTGGCTAGT										
Mus musculus	RefSeq	ILMN_186883	ILMN_228028	CDC2L6	NM_198164.2	NM_198164.2		78334	142383910	NM_198164.2	Cdc2l6	NP_937807.1	ILMN_2644664	004780681	S	3803	GCAGCAGTTGGGTGGCCCTTGTGGACAGAGCATATTCTACTAAGTGGTTG	10	+	40201781-40201830	10qB1	Mus musculus cell division cycle 2-like 6 (CDK8-like) (Cdc2l6), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	AW228747; CDK11; mKIAA1028; 2700084L06Rik; AI845279	AW228747; CDK11; mKIAA1028; 2700084L06Rik; AI845279
Mus musculus	Riken	ILMN_207019	ILMN_207019	9230108M03RIK	ri|9230108M03|PX00651F12|AK079003|781					AK079003	9230108M03Rik		ILMN_2584441	000940392	S	516	CAGAGTATGAGTGTGTCCAGAGGCTCAGCAGGAAACCGTCTGGGGACCGT										
Mus musculus	RefSeq	ILMN_251860	ILMN_251860	ZFP748	NM_183145.2	NM_183145.2		212276	78191782	NM_183145.2	Zfp748	NP_898968.1	ILMN_3083372	007510543	A	295	GACAAGAGCCTTTGAATGAGAAGAGACAAGTGGCCACCACCATGCACCCA	13	-	67646260-67646309	13qB3	Mus musculus zinc finger protein 748 (Zfp748), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mszf54; MGC60742; KIAA4236; BC055310; mKIAA4236; 2610014M12Rik	mszf54; MGC60742; KIAA4236; BC055310; mKIAA4236; 2610014M12Rik
Mus musculus	RefSeq	ILMN_220470	ILMN_251860	ZFP748	NM_183145.2	NM_183145.2		212276	78191782	NM_183145.2	Zfp748	NP_898968.1	ILMN_1216917	007550709	S	593	CTGAGAGTCTGCCTTTCAATGGAATTTTGACTGTTTCCTATACTTTTGAA	13	-	67645962-67646011	13qB3	Mus musculus zinc finger protein 748 (Zfp748), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mszf54; MGC60742; KIAA4236; BC055310; mKIAA4236; 2610014M12Rik	mszf54; MGC60742; KIAA4236; BC055310; mKIAA4236; 2610014M12Rik
Mus musculus	RefSeq	ILMN_255877	ILMN_255877	1190002N15RIK	NM_001033145.2	NM_001033145.2		68861	115392139	NM_001033145.2	1190002N15Rik	NP_001028317.2	ILMN_3162133	005560576	S	2006	CATTCCGTGCTATGCGGTACATACTTAAACTGTTAGGGCAGGACTCCCAG	9	-	94420177-94420226	9qE3.3	Mus musculus RIKEN cDNA 1190002N15 gene (1190002N15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_190706	ILMN_255877	1190002N15RIK	NM_001033145.2	NM_001033145.2		68861	115392139	NM_001033145.2	1190002N15Rik	NP_001028317.2	ILMN_2472566	007210240	S	3761	TTAATAGACGCAGTGAAATATTTTTGAATCAAAACATTTGGGGTTTGTAT	9	-	94418422-94418471	9qE3.3	Mus musculus RIKEN cDNA 1190002N15 gene (1190002N15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211354	ILMN_211354	RAB27A	NM_023635.4	NM_023635.4		11891	146141108	NM_023635.4	Rab27a	NP_076124.1	ILMN_2614966	000380307	S	2749	GTTGGCTCCACACCAGGCACGGGGCTTAATGTGTGTGATAGTTGCCCAAC				9qD	Mus musculus RAB27A, member RAS oncogene family (Rab27a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IMP]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IDA]	Any process by which a pigment granule is transported to, and/or maintained in, a specific location within the cell [goid 51875] [evidence IMP]; The directed movement of pigment granules into, out of, within or between cells [goid 51904] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a cytotoxic T cell [goid 43316] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IMP]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IMP]; The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a natural killer cell [goid 43320] [evidence IMP]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IMP]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a class V myosin; myosin V is a dimeric molecule involved in intracellular transport [goid 31489] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISS]	2410003M20Rik; 2210402C08Rik; ash; 4933437C11Rik	2410003M20Rik; 2210402C08Rik; ash; 4933437C11Rik
Mus musculus	MEEBO	ILMN_223724	ILMN_223724	SAA1	scl020208.3_20	NM_009117.1			6677842	NM_009117.1	Saa1		ILMN_2768154	005260487	S	33	CTGCTCCTGGGAGTCTGCCATGGAGGGTTTTTTTCATTTGTTCACGAGGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196759	ILMN_196759	IFNA1	NM_010502.2	NM_010502.2		15962	117168292	NM_010502.2	Ifna1	NP_034632.2	ILMN_2858639	004780072	S	355	CTGCAAGGCTGTCTGATGCAGCAGGTGGGGGTGCAGGAATTTCCCCTGAC	4	+	88496345-88496394	4qC4	Mus musculus interferon alpha 1 (Ifna1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]	 [goid 5126] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	Ifa1	Ifa1
Mus musculus	RefSeq	ILMN_196759	ILMN_196759	IFNA1	NM_010502.2	NM_010502.2		15962	117168292	NM_010502.2	Ifna1	NP_034632.2	ILMN_2617487	004050397	S	179	GATTCCCGCAGGAGAAGGTGGATGCCCAGCAGATCAAGAAGGCTCAAGCC	4	+	88496169-88496218	4qC4	Mus musculus interferon alpha 1 (Ifna1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]	 [goid 5126] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	Ifa1	Ifa1
Mus musculus	RefSeq	ILMN_194420	ILMN_236221	GPC4	NM_008150.1	NM_008150.1		14735	6680058	NM_008150.1	Gpc4	NP_032176.1	ILMN_1258035	005270491	S	2117	CTCGCTGTGCAGGGAGAGTGGAGATAATTGTCAAACTCTGAGTAAAAGCG	X	-	49406682-49406697:49406698-49406731	XqA5	Mus musculus glypican 4 (Gpc4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]			9530073D23Rik; AF311610; AI385680; K-glypican; AI661372	9530073D23Rik; AF311610; AI385680; K-glypican; AI661372
Mus musculus	RefSeq	ILMN_191151	ILMN_234267	ZXDB	NM_001081473.1	NM_001081473.1		668166	125490364	NM_001081473.1	Zxdb	NP_001074942.1	ILMN_2476568	007610445	S	2991	CTTATAAAGGACATGGTTTAGGTTAGATTGCTTTTGTCATCTTTTCAGCT	X	+	91972898-91972947	XqC3	Mus musculus zinc finger, X-linked, duplicated B (Zxdb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212399	ILMN_212399	1110004E09RIK	NM_026502.1	NM_026502.1		68001	23956185	NM_026502.1	1110004E09Rik	NP_080778.1	ILMN_1257567	006580059	S	709	GACTATGTGGGGAAAAATGAGAAAACCAAAATCATCGTCAAGATCCAGCA	16	-	90927343-90927392	16qC3.3	Mus musculus RIKEN cDNA 1110004E09 gene (1110004E09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_224301	ILMN_260925	LOC669030	XM_972621.1	XM_972621.1		669030	94364875	XM_972621.1	LOC669030	XP_977715.1	ILMN_1236451	001570504	S	691	AAGAAAGCTCCGCTCCAACAGCGATCAAGGTCTCAGACGCCCTTGAGTAC					PREDICTED: Mus musculus similar to regulating synaptic membrane exocytosis 1 (LOC669030), mRNA.					
Mus musculus	RefSeq	ILMN_215947	ILMN_215947	MRPL22	NM_175001.2	NM_175001.2		216767	142364233	NM_175001.2	Mrpl22	NP_778166.1	ILMN_2665552	001940358	S	301	CATTGATCAGGCTTTGGCGCAGCTGGAGTTCAATGATAAAAAGGGGGCTC	11	+	57989648-57989697	11qB1.3	Mus musculus mitochondrial ribosomal protein L22 (Mrpl22), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	HSPC158; MRP-L25; RP24-499A8.2; Rpml25; E030011D16Rik	HSPC158; MRP-L25; RP24-499A8.2; Rpml25; E030011D16Rik
Mus musculus	RefSeq	ILMN_216390	ILMN_216390	HBB-BH1	NM_008219.3	NM_008219.3		15132	145386512	NM_008219.3	Hbb-bh1	NP_032245.1	ILMN_1225816	007320424	S	521	CCCATGTGTCTATGATGCCCTCTTTGAGTCCATGGGGACTGCATTGAGAG				7qE3	Mus musculus hemoglobin Z, beta-like embryonic chain (Hbb-bh1), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IEA]	The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	betaH1	betaH1
Mus musculus	Riken	ILMN_204864	ILMN_204864	A130069J20RIK	ri|A130069J20|PX00125A05|AK037989|1616					AK037989	A130069J20Rik		ILMN_1222093	000620475	S	1140	GAGCAATTCTGGGTTAAAATTTTGGACATGGGTGGGTGGCCCTATCCCTC										
Mus musculus	MEEBO	ILMN_193224	ILMN_193224	D630040I23RIK	scl6163.1.1_218						D630040I23Rik		ILMN_2495167	000580674	S	10	CCTCCATGGCCTCAGCTCTGGGGAGTGTATTTTGTGGCATTTAAGGCAAG										
Mus musculus	RefSeq	ILMN_241985	ILMN_241985	XLR4B	NM_021365.1	NM_021365.1		27083	10946693	NM_021365.1	Xlr4b	NP_067340.1	ILMN_2978502	003520753	S	87	CGCTGTGGTAAAGGACCCTGTGTTCATCAAAGTGAGGAGGCTAAGGGTTG	X	+	69467171-69467220	XqA7.3	Mus musculus X-linked lymphocyte-regulated 4B (Xlr4b), mRNA.				Xlr4	Xlr4
Mus musculus	MEEBO	ILMN_195162	ILMN_195162	SLCO5A1	scl0240726.1_259				27370265	NM_172841	Slco5a1		ILMN_1228979	003390309	S	4730	GGATGGCTGAAATACTGTCTATTCTAGAATCTTTTTTCAGCTGGGTGCTA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_195162	ILMN_195162	SLCO5A1	scl0240726.1_259				27370265	NM_172841	Slco5a1		ILMN_1213557	004070379	S	19	CTGTTTCATAGCACACCCTAGGAGGCCACTGCCAACTACTGTCTTAGGTG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_210878	ILMN_210878	SNRPD1	NM_009226.2	NM_009226.2		20641	31982006	NM_009226.2	Snrpd1	NP_033252.1	ILMN_2610105	006220504	S	43	TAACCCCAGTCCGTGGATCTCTGGAGCCTGAATTCTGTGAACAGTCGGGC	18	+	10617836-10617885	18qA1	Mus musculus small nuclear ribonucleoprotein D1 (Snrpd1), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]		SMD1; AA407109; AL023031	SMD1; AA407109; AL023031
Mus musculus	MEEBO	ILMN_186217	ILMN_186217	1700120C14RIK	scl073600.1_142						1700120C14Rik		ILMN_1258006	003870564	S	3	CCGTGAGACACATCTACTTCCGGGTTGCGAACGAAGGGTTGGACGATCTC										
Mus musculus	MEEBO	ILMN_213490	ILMN_213490	CACNA1S	scl17429.45.1_69	XM_358335.1			38073275	XM_358335.1	Cacna1s		ILMN_2637561	002810735	S	5513	CAGATGCCTGCCAGATGGAACCAGAGGAAGTCGAGGTGGCAGCAACAGAG						Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]	The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle [goid 2074] [evidence IMP]; Any process by which skeletal muscle fibers change their phenotypic profiles in response to altered functional demands and a variety of signals [goid 43501] [evidence IMP]; The process whose specific outcome is the progression of a muscle cell over time, from its formation to the mature structure. Muscle cell development does not include the steps involved in committing an unspecified cell to the muscle cell fate [goid 55001] [evidence IMP]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IDA]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IDA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]		
Mus musculus	RefSeq	ILMN_198509	ILMN_244527	IGFL3	NM_001003393.1	NM_001003393.1		232925	50979275	NM_001003393.1	Igfl3	NP_001003393.1	ILMN_1242115	001770253	S	256	AGGCCCTGCTTTGAGCTCTGCTGTCCTGAGTCCTATAGCCCCAAGAAGAA	7	+	18765298-18765347	7qA2	Mus musculus IGF-like family member 3 (Igfl3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Gm580; RPRC483; Igfl	Gm580; RPRC483; Igfl
Mus musculus	RefSeq	ILMN_244527	ILMN_244527	IGFL3	NM_001003393.1	NM_001003393.1		232925	50979275	NM_001003393.1	Igfl3	NP_001003393.1	ILMN_2861641	000380148	S	257	GGCCCTGCTTTGAGCTCTGCTGTCCTGAGTCCTATAGCCCCAAGAAGAAA	7	+	18765299-18765348	7qA2	Mus musculus IGF-like family member 3 (Igfl3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Gm580; RPRC483; Igfl	Gm580; RPRC483; Igfl
Mus musculus	MEEBO	ILMN_188742	ILMN_188742	1700048F04RIK	scl27202.3.4_21						1700048F04Rik		ILMN_1214257	002650551	S	8	CCACCACCTTGTCTTTCTCAGCTTGCTTTTTCTCTCCTTCCCTCGTTTAT										
Mus musculus	MEEBO	ILMN_184866	ILMN_184866	TTN	scl19104.8.1_3				51706224	XM_130322	Ttn		ILMN_1220329	005700048	S	14	GCTACAAACAACTCGGGAATGGCTAGGAGCTCAGCTATCCTCACCCTCTC						A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184866	ILMN_184866	TTN	scl19104.8.1_3				51706224	XM_130322	Ttn		ILMN_2744368	003440593	S	2771	TTGAACTGGAGAGCAGGAGTTGGAGTGCCCAAGCCAAAGAACATGAGCGC						A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196270	ILMN_241419	LOC634081	XM_908688.2	XM_908688.2		634081	94409534	XM_908688.2	LOC634081	XP_913781.2	ILMN_2523193	006560739	S	166	GTGAAGCAGAGCAATGGAAAGAGCCTTGAGTGGATTGGATATATTAATCC					PREDICTED: Mus musculus similar to Ig heavy chain V-I region HG3 precursor (LOC634081), mRNA.					
Mus musculus	RefSeq	ILMN_199188	ILMN_236948	LOC216880	XM_910017.1	XM_910017.1		216880	82936056	XM_910017.1	LOC216880	XP_915110.1	ILMN_1224219	005720041	S	561	CACATGGGCTCAGTGCTACAGAGGGAAGGAGAAGAGAGGCCCCTGGACTC					PREDICTED: Mus musculus gene model 250, (NCBI) (LOC216880), mRNA.					
Mus musculus	RefSeq	ILMN_213829	ILMN_213829	SULT1D1	NM_016771.2	NM_016771.2		53315	42734448	NM_016771.2	Sult1d1	NP_058051.2	ILMN_2641217	002680300	S	1773	GGTTTTGGATCACACCAGGGTCATTTTCATCCTCCTGAAATTAATCATTC	5	-	87984199-87984248	5qE1	Mus musculus sulfotransferase family 1D, member 1 (Sult1d1), mRNA.		The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds [goid 103] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + L-tyrosine methyl ester = adenosine 3',5'-bisphosphate + L-tyrosine methyl ester 4-sulfate [goid 17067] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IDA]	5033411P13Rik; AI987815; Sultn; ST1d1; SULT-N	5033411P13Rik; AI987815; Sultn; ST1d1; SULT-N
Mus musculus	RefSeq	ILMN_213829	ILMN_213829	SULT1D1	NM_016771.2	NM_016771.2		53315	42734448	NM_016771.2	Sult1d1	NP_058051.2	ILMN_2955850	006060575	S	1970	CATTCTTGACATGAGAAAATTGTTGAAGTGGACAGCTAGTTAATGGTAAC	5	-	87984002-87984051	5qE1	Mus musculus sulfotransferase family 1D, member 1 (Sult1d1), mRNA.		The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds [goid 103] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + L-tyrosine methyl ester = adenosine 3',5'-bisphosphate + L-tyrosine methyl ester 4-sulfate [goid 17067] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IDA]	5033411P13Rik; AI987815; Sultn; ST1d1; SULT-N	5033411P13Rik; AI987815; Sultn; ST1d1; SULT-N
Mus musculus	RefSeq	ILMN_211598	ILMN_211598	DEK	NM_025900.1	NM_025900.1		110052	29789159	NM_025900.1	Dek	NP_080176.1	ILMN_2617499	001170762	S	566	AGGCGTGAACAGCGAACTCGTGAAGAGGATCTTGAACTTCTTAATGCATC	13	-	47194728-47194777	13qA5	Mus musculus DEK oncogene (DNA binding) (Dek), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1810019E15Rik; D13H6S231E	1810019E15Rik; D13H6S231E
Mus musculus	RefSeq	ILMN_211598	ILMN_211598	DEK	NM_025900.1	NM_025900.1		110052	29789159	NM_025900.1	Dek	NP_080176.1	ILMN_2755384	004730088	S	1976	GGGAAGGCGTGAGCACACATGGATTTATATATAAGTGAACTGACAGTAGT	13	-	47180602-47180651	13qA5	Mus musculus DEK oncogene (DNA binding) (Dek), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1810019E15Rik; D13H6S231E	1810019E15Rik; D13H6S231E
Mus musculus	RefSeq	ILMN_211598	ILMN_211598	DEK	NM_025900.1	NM_025900.1		110052	29789159	NM_025900.1	Dek	NP_080176.1	ILMN_2617496	004490286	S	568	GGCGTGAACAGCGAACTCGTGAAGAGGATCTTGAACTTCTTAATGCATCC	13	-	47194726-47194775	13qA5	Mus musculus DEK oncogene (DNA binding) (Dek), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1810019E15Rik; D13H6S231E	1810019E15Rik; D13H6S231E
Mus musculus	RefSeq	ILMN_217957	ILMN_217957	MRGPRD	NM_203490.3	NM_203490.3		211578	142378210	NM_203490.3	Mrgprd	NP_987075.1	ILMN_2689781	005550142	S	1218	GGCTACTTTATAGCTGCGTATCACGCTTCTCTTCGTCTTTGAGCAGCAGT	7	+	152508065-152508114	7qF5	Mus musculus MAS-related GPR, member D (Mrgprd), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MrgD; Gm499; TGR7	MrgD; Gm499; TGR7
Mus musculus	RefSeq	ILMN_220425	ILMN_220425	OLFR171	NM_146958.1	NM_146958.1		258960	22129004	NM_146958.1	Olfr171	NP_667169.1	ILMN_2721856	006220195	S	875	GCTTTCGGAATAAAGATGTCCTCATGGCTTTGAAAAACATAGTCCAAAGT	16	-	19624270-19624319	16qA3	Mus musculus olfactory receptor 171 (Olfr171), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR273-1; MOR273-5	MOR273-1; MOR273-5
Mus musculus	MEEBO	ILMN_184280	ILMN_184280	9330164J24RIK	scl49500.1.230_50						9330164J24Rik		ILMN_2417344	001300332	S	11	TCCCTGTGACTCACGCACGTGGTGGTTCTGAGATCAGCCCATGCTCAATG										
Mus musculus	RefSeq	ILMN_200217	ILMN_200217	LOC385971	XM_359018.1	XM_359018.1			38080973	XM_359018.1	LOC385971		ILMN_1251491	003520343	S	273	GCGAGGACTCCGGGACCACCAACGACTACAAGAAGCAAGCTACAGGAAGG										
Mus musculus	RefSeq	ILMN_209125	ILMN_209125	1300012G16RIK	NM_023625.3	NM_023625.3		71772	142343676	NM_023625.3	1300012G16Rik	NP_076114.2	ILMN_1223612	007040707	S	4147	TGGTCCTCTCCCCTTTGATCCCAGCTACTGCTATCATGATTACCAGACTC	5	-	120933295-120933344	5qF	Mus musculus RIKEN cDNA 1300012G16 gene (1300012G16Rik), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p76; AU019810	p76; AU019810
Mus musculus	MEEBO	ILMN_190209	ILMN_190209	AI847670	scl28067.9_404				31342802	NM_177869	AI847670		ILMN_2468121	004120398	S	13	TGTGGGGAAAGCGATGCTGCCGGGTTTTAGTTGGTCTTCTGTGGGTTAGG										
Mus musculus	MEEBO	ILMN_190209	ILMN_190209	AI847670	scl28067.9_404				31342802	NM_177869	AI847670		ILMN_2592795	007320176	S	1495	CAGATTGAGGTTATGAGCATATCTTATAGAGTGTTGTTGGTACAGCTTTT										
Mus musculus	RefSeq	ILMN_212637	ILMN_212637	VMN2R81	NM_175936.1	NM_175936.1		216144	35215312	NM_175936.1	Vmn2r81	NP_787950.1	ILMN_2628699	001440360	S	2763	CCCTAGAATGCCATGCTGAAATAAGTAACAAATTTCACACACTATGACTG	10	+	78756765-78756814	10qC1	Mus musculus vomeronasal 2, receptor 81 (Vmn2r81), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	EC1-V2R; EC1-VR2	EC1-V2R; EC1-VR2
Mus musculus	RefSeq	ILMN_212637	ILMN_212637	VMN2R81	NM_175936.1	NM_175936.1		216144	35215312	NM_175936.1	Vmn2r81	NP_787950.1	ILMN_2822796	002350332	S	3214	AAGGTGTACAGCATATGTGCAATGAATTGATCCTCAAGTTTCTAATAAAA	10	+	78757216-78757265	10qC1	Mus musculus vomeronasal 2, receptor 81 (Vmn2r81), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	EC1-V2R; EC1-VR2	EC1-V2R; EC1-VR2
Mus musculus	Riken	ILMN_202824	ILMN_202824	ABCC1A	ri|9230102B04|PX00061J19|AK033750|1769					AK033750	Abcc1a		ILMN_2552589	002760484	S	1311	GGCAGCTTGCATTTGCTGATTCCTCTTATTCCTCTTGTGATCCAGGCTCC										
Mus musculus	RefSeq	ILMN_257940	ILMN_257940	MCM9	NM_027830.2	NM_027830.2		71567	86439952	NM_027830.2	Mcm9	NP_082106.2	ILMN_3160745	005260332	S	3436	AGGGAACAGGGCCCCAAAAGAAGGGTTATTCAGCCCAAACCGGAGCTTGG	10	-	53257517-53257566	10qB3	Mus musculus minichromosome maintenance complex component 9 (Mcm9), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	9030408O17Rik; Mcmdc1; MCM9; Gm235; MGC70158	9030408O17Rik; Mcmdc1; MCM9; Gm235; MGC70158
Mus musculus	RefSeq	ILMN_209728	ILMN_209728	GM443	NM_198621.2	NM_198621.2		242891	113930709	NM_198621.2	Gm443	NP_941023.1	ILMN_2598594	006020280	S	1728	GGACATACTGAGGACCAAAGCCCAAGGGTTACAAGCAGTTGCTGAGCTGG	5	+	25023612-25023661	5qA3	Mus musculus gene model 443, (NCBI) (Gm443), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC58709	MGC58709
Mus musculus	RefSeq	ILMN_212821	ILMN_225858	PHF20L1	XM_989935.1	XM_989935.1		239510	94399528	XM_989935.1	Phf20l1	XP_995029.1	ILMN_2630739	006620386	S	2913	GGAATTGGGATTTTTCAACACTGCTAATGAAGATCCCCTCTTATAGTCCA				15qD2	PREDICTED: Mus musculus PHD finger protein 20-like 1, transcript variant 6 (Phf20l1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192669	ILMN_225858	PHF20L1	XM_989935.1	XM_989935.1		239510	94399528	XM_989935.1	Phf20l1	XP_995029.1	ILMN_1242158	006110497	S	3068	GAGGGTAACCACAAAGGAGCAACTAAGAATCACTCACAATTATTGAAGGC				15qD2	PREDICTED: Mus musculus PHD finger protein 20-like 1, transcript variant 6 (Phf20l1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190255	ILMN_230592	EG665685	XR_001769.2	XR_001769.2		665685	149255372	XR_001769.2	EG665685		ILMN_1219258	003130762	S	516	GACGATGAAGACGCCTATAGTGATTCAGAAGGCAATGAAGTCATGACTCC	6	+	90856070-90856119	6qD1	PREDICTED: Mus musculus predicted gene, EG665685 (EG665685), misc RNA.					
Mus musculus	MEEBO	ILMN_223849	ILMN_223849	CD80	scl49148.7.844_25				31982960	NM_009855	Cd80		ILMN_2770381	004280095	S	2494	AGACATTGAAAGCCACACCAAAGAAAAACCAGGAGGGCGGGGGAAGTAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_218998	ILMN_257263	PRKAG3	NM_153744.1	NM_153744.1		241113	24371222	NM_153744.1	Prkag3	NP_714966.1	ILMN_2702917	006270647	S	1474	AGCGCCTGAGTCCTCACACCCAAGCCATCTTCTTCACCTGAAAACCAACG	1	-	74787237-74787278:74787279-74787286	1qC3	Mus musculus protein kinase, AMP-activated, gamma 3 non-catatlytic subunit (Prkag3), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IMP]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	AMKg3S; AMPKg3S; AMPKg3; AMPKg3L; AMKg3L	AMKg3S; AMPKg3S; AMPKg3; AMPKg3L; AMKg3L
Mus musculus	MEEBO	ILMN_187629	ILMN_187629	VPS26	scl0003803.1_4	NM_133672.1			19526825	NM_133672.1	Vps26		ILMN_1236274	001110736	S	15	GTGGGTTTCTAAGGACGGCCATGTTCTCCTTCATGTAAGTGCCTGTTCAG										
Mus musculus	MEEBO	ILMN_190592	ILMN_190592	2900084M01RIK	scl073095.1_45				51764168	XM_134226	2900084M01Rik		ILMN_2471523	000380139	S	11	AGCCACACAGGAGGTCAGGCAGGGATCCAGAGCCCAATTCAAAAGACACC										
Mus musculus	MEEBO	ILMN_190592	ILMN_190592	2900084M01RIK	scl073095.1_45				51764168	XM_134226	2900084M01Rik		ILMN_1245128	007650730	S	12	GCCACACAGGAGGTCAGGCAGGGATCCAGAGCCCAATTCAAAAGACACCC										
Mus musculus	Riken	ILMN_202853	ILMN_202853	A130009C12RIK	ri|A130009C12|PX00121K02|AK037344|548					AK037344	A130009C12Rik		ILMN_1235177	007150707	S	118	GTATGACGCACAGGTCAAAGGTCCCCTTGCAGAGATGCGCTGGCAGTTGA										
Mus musculus	MEEBO	ILMN_214980	ILMN_214980	A930006D20RIK	scl077939.1_25	XM_148737.1			20896154	XM_148737.1	A930006D20Rik		ILMN_2654148	007150739	S	579	CCCAGAATTTTGTTAGTCAGATTTAATAGGAATGGTATGATCTGTGCATC										
Mus musculus	Riken	ILMN_205507	ILMN_205507	D130046C19RIK	ri|D130046C19|PX00184D09|AK051399|1407					AK051399	D130046C19Rik		ILMN_1240451	000010192	S	887	GCAGGGGCCAGTGTTCCAGACCTACTCCATCCTTGGCTGTGCTTTGAGAT										
Mus musculus	MEEBO	ILMN_212361	ILMN_212361	9030624O13RIK	scl0105243.5_254				51767973	XM_127434	9030624O13Rik		ILMN_1245464	003610270	S	4952	GTTGAGCTTCAATTCTGATCACAGAATCTCGTGCCTTAAAGCGGCCCTCC										
Mus musculus	MEEBO	ILMN_212361	ILMN_212361	9030624O13RIK	scl0105243.5_254				51767973	XM_127434	9030624O13Rik		ILMN_2656595	004050377	S	1665	TCCCCAAGTACGGACAATATGGTCAATGTGGACTTCAACACACCCCGCCC										
Mus musculus	RefSeq	ILMN_196150	ILMN_316803	2010204K13RIK	XR_035367.1	XR_035367.1		68355	149270943	XR_035367.1	2010204K13Rik		ILMN_1224576	001710491	S	386	TTACTTTGTGGCTTATTATTCTTGTTCTTTCAGTGTCTTTCTAAAAATAA	X	-	6989177-6989226	XqA1.1	PREDICTED: Mus musculus RIKEN cDNA 2010204K13 gene (2010204K13Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_209877	ILMN_209877	OLFR821	NM_146776.1	NM_146776.1		258772	22129294	NM_146776.1	Olfr821	NP_666987.1	ILMN_2870513	003870192	S	809	AAGGGATAGCTCTGCTCAGCACTTCAGTTGCACCCATGTTGAATCCCTTC	10	+	129471492-129471541	10qD3	Mus musculus olfactory receptor 821 (Olfr821), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR109-1	MOR109-1
Mus musculus	MEEBO	ILMN_190353	ILMN_190353	C430047I10RIK	scl077649.2_21						C430047I10Rik		ILMN_1242213	002750047	S	1	GGCCTAATCCAGCAGGTCGGAGAATGACATGGATTAACTTCCGTGACAGC										
Mus musculus	RefSeq	ILMN_185200	ILMN_327761	LOC100048076	XM_001479683.1	XM_001479683.1		100048076	149270143	XM_001479683.1	LOC100048076	XP_001479733.1	ILMN_2706631	001500717	S	3093	GCCATCCTTGATCACTTGGCGGTGACTTTGTAGAGATTGAAGTGGAGGAG					PREDICTED: Mus musculus similar to MAD homolog 4 (Drosophila), transcript variant 1 (LOC100048076), mRNA.					
Mus musculus	RefSeq	ILMN_212152	ILMN_212152	IFI204	NM_008329.2	NM_008329.2		15951	118130978	NM_008329.2	Ifi204	NP_032355.2	ILMN_2623314	003060554	S	2190	TTTTCTATATCTAAATTCATTTGTTGTCTCTATAACTTCTATAACTGTTC	1	-	175677480-175677529	1qH3	Mus musculus interferon activated gene 204 (Ifi204), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISO]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IGI]	p204; Ifi16	p204; Ifi16
Mus musculus	RefSeq	ILMN_212152	ILMN_212152	IFI204	NM_008329.2	NM_008329.2		15951	118130978	NM_008329.2	Ifi204	NP_032355.2	ILMN_3010089	007550093	S	281	TGATGGAAGAGAAATTTCCAGCTGATTCTGGATTGGGCAAACTGATTGCG	1	-	175691793-175691842	1qH3	Mus musculus interferon activated gene 204 (Ifi204), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IGI]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISO]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IGI]	p204; Ifi16	p204; Ifi16
Mus musculus	RefSeq	ILMN_215228	ILMN_215228	DUSP10	NM_022019.2	NM_022019.2		63953	31560302	NM_022019.2	Dusp10	NP_071302.2	ILMN_2818964	003930736	S	2407	GTGAGGAGTGGCGTTGGAGACAGGCATTCAACAGTACCAGTGGCTTCCCC	1	+	185776587-185776636	1qH5	Mus musculus dual specificity phosphatase 10 (Dusp10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	2610306G15Rik; MKP-5; AI158871	2610306G15Rik; MKP-5; AI158871
Mus musculus	Riken	ILMN_206599	ILMN_206599	EEG1-PENDING	ri|E030016B05|PX00205G04|AK086962|2620					AK086962	Eeg1-pending		ILMN_1256416	004230689	S	2312	CTGATGGGCATGCACTGATGGCTGTGTACTGATAGCTGTGTGCTGGTGCC										
Mus musculus	MEEBO	ILMN_184407	ILMN_184407	NRXN2	scl52878.1.594_203				51771720	XM_111780	Nrxn2		ILMN_1253547	002350369	S	1168	GCAGTGAAGAGGAACACCCCATGGAAGGCAAGGAGGAATTTGTGGCAACC						A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biosynthesis of a synapse [goid 7416] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA];  [goid 5246] [evidence IGI]		
Mus musculus	MEEBO	ILMN_184407	ILMN_184407	NRXN2	scl52878.1.594_203				51771720	XM_111780	Nrxn2		ILMN_2418389	000150731	S	19	CACGGCCTATTTGTTGATGTAAGTTGCCTGAATTCCGTGGTATGCTATCT						A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biosynthesis of a synapse [goid 7416] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA];  [goid 5246] [evidence IGI]		
Mus musculus	RefSeq	ILMN_221002	ILMN_252184	RRN3	NM_001039521.1	NM_001039521.1		106298	87299629	NM_001039521.1	Rrn3	NP_001034610.1	ILMN_2729771	006560139	S	3409	GATGGGATGCCAGGCTTGGAAAGTAGCTAGAATGTAGAAGGTATGTTGAC	16	+	13814745-13814794	16qA1	Mus musculus RRN3 RNA polymerase I transcription factor homolog (yeast) (Rrn3), mRNA.		Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells [goid 48872] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP];  [goid 6361] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 7028] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly the nucleolus [goid 7000] [evidence IMP]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]		AL023001; R75565; E130302O19Rik; Tif1a	AL023001; R75565; E130302O19Rik; Tif1a
Mus musculus	RefSeq	ILMN_212026	ILMN_233089	BC004022	XM_894155.2	XM_894155.2		80750	94383719	XM_894155.2	BC004022	XP_899248.2	ILMN_2621901	003870270	S	3367	CTGGGGAACTGCCAACCGTGGGATGGACCATAACGTGAAGAAGCCTTCCC	8	-	89368511-89368560	8qC3	PREDICTED: Mus musculus cDNA sequence BC004022, transcript variant 1 (BC004022), mRNA.					
Mus musculus	RefSeq	ILMN_186961	ILMN_238162	BC018101	NM_001005358.1	NM_001005358.1		449000	52851394	NM_001005358.1	BC018101	NP_001005358.1	ILMN_2439967	006110674	S	1588	TGAAATAACACATACCAAAGAGAAACCCTATGAATGTAACCAGTGTGGCA	17	+	17225513-17225562	17qA3.1	Mus musculus cDNA sequence BC018101 (BC018101), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212569	ILMN_212569	ETFB	NM_026695.2	NM_026695.2		110826	38142459	NM_026695.2	Etfb	NP_080971.2	ILMN_3104414	006580411	A	512	TCTGGAGACCCTTCGCCTGAAGCTGCCCGCTGTGGTGACTGCTGACCTAA	7	+	50711917-50711966	7qB4	Mus musculus electron transferring flavoprotein, beta polypeptide (Etfb), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system [goid 17133] [evidence TAS]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence TAS]	2810441H06Rik; 0610009I16Rik	2810441H06Rik; 0610009I16Rik
Mus musculus	RefSeq	ILMN_212569	ILMN_212569	ETFB	NM_026695.2	NM_026695.2		110826	38142459	NM_026695.2	Etfb	NP_080971.2	ILMN_2627895	004260050	S	665	CAAGGTCTCTGTGATCAGTGTGGAAGAGCCCCCTCAGCGCTCAGCAGGAG	7	+	50713002-50713051	7qB4	Mus musculus electron transferring flavoprotein, beta polypeptide (Etfb), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A protein complex located in the mitochondrion. It contains flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors in the mitochondrial electron transport system [goid 17133] [evidence TAS]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence TAS]	2810441H06Rik; 0610009I16Rik	2810441H06Rik; 0610009I16Rik
Mus musculus	RefSeq	ILMN_251149	ILMN_251149	FLOT2	NM_001040403.1	NM_001040403.1		14252	94536790	NM_001040403.1	Flot2	NP_001035493.1	ILMN_3152380	002490739	A	2526	GCTGCATGTCTGGTCCGGGATTTGGATGTTGCACTACCCCACTGCCTGTC	11	+	77873851-77873900	11qB5	Mus musculus flotillin 2 (Flot2), transcript variant 1, mRNA.	Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A heteromeric complex of flotillin 1, flotillin 2, caveolin 1 and caveolin 2 within the caveolar membrane [goid 16600] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI573412; Esa	AI573412; Esa
Mus musculus	RefSeq	ILMN_190807	ILMN_236175	AHSA2	NM_172391.3	NM_172391.3		268390	62530187	NM_172391.3	Ahsa2	NP_765979.3	ILMN_2746000	004260685	S	2598	GTCGTCAAACCTGCCATTGTTAGACTGTTCCTCTGCATGCTGTGACCGGA	11	-	23388838-23388887	11qA3.2	Mus musculus AHA1, activator of heat shock protein ATPase homolog 2 (yeast) (Ahsa2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IEA]; Increases the activity of a molecular chaperone [goid 30189] [evidence IEA]; Functions to increase the rate of ATP hydrolysis [goid 1671] [evidence IEA]	RP23-188K3.2; 1110064P04Rik; AI450991; FLJ36626	RP23-188K3.2; 1110064P04Rik; AI450991; FLJ36626
Mus musculus	RefSeq	ILMN_198939	ILMN_231243	EG640554	XM_973282.1	XM_973282.1		640554	94386114	XM_973282.1	EG640554	XP_978376.1	ILMN_1216494	004280563	S	250	GGCCAGGCTCATCAAGAAAAGCTGCCCATCCGACAGATCTCAGGGACTTG	9	+	54902842-54902891	9qB	PREDICTED: Mus musculus predicted gene, EG640554 (EG640554), mRNA.					
Mus musculus	RefSeq	ILMN_184504	ILMN_260782	GOLIM4	NM_175193.5	NM_175193.5		73124	133892733	NM_175193.5	Golim4	NP_780402.1	ILMN_1258813	004220079	S	2806	GCTCAGTACCATTTTGTTTTCTGGCTTCCGGGTAGTCTACTATTTATCTC	3	-	75681598-75681647	3qE3	Mus musculus golgi integral membrane protein 4 (Golim4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		P138; GIMPC; GPP130; Golph4; 3110027H23Rik; MGC102202	P138; GIMPC; GPP130; Golph4; 3110027H23Rik; MGC102202
Mus musculus	RefSeq	ILMN_189963	ILMN_234210	LOC676136	XM_987671.1	XM_987671.1		676136	94377664	XM_987671.1	LOC676136	XP_992765.1	ILMN_2465985	007000202	S	57	CGTGTTTCTCTGGTTGTCTGGTGTTGACGGAGACATTGTGATGACCCAGT					PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC676136), mRNA.					
Mus musculus	RefSeq	ILMN_216738	ILMN_234210	LOC676136	XM_987671.1	XM_987671.1		676136	94377664	XM_987671.1	LOC676136	XP_992765.1	ILMN_2674666	003190687	S	43	CAGGTCTTTGTATTCGTGTTTCTCTGGTTGTCTGGTGTTGACGGAGACAT					PREDICTED: Mus musculus similar to Ig kappa chain V-V region MPC11 precursor (LOC676136), mRNA.					
Mus musculus	RefSeq	ILMN_221437	ILMN_221437	ISG20	NM_020583.4	NM_020583.4		57444	31981452	NM_020583.4	Isg20	NP_065608.2	ILMN_2735615	000540411	S	720	CCACAATGGAGCTCTACAAAATCTCTCAGCGACTCAGAGCCCAGCGAGGG	7	+	86064972-86065021	7qD3	Mus musculus interferon-stimulated protein (Isg20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction [goid 8859] [evidence IEA]	20kDa; HEM45; DnaQL; 1600023I01Rik; 2010107M23Rik	20kDa; HEM45; DnaQL; 1600023I01Rik; 2010107M23Rik
Mus musculus	RefSeq	ILMN_223469	ILMN_223469	TCEAL8	NM_025703.2	NM_025703.2		66684	31981214	NM_025703.2	Tceal8	NP_079979.2	ILMN_2861493	001070047	S	473	GGAAGCAAAGACATTCCCGAAGCCGTCCTTACCCTGTGTGCTTCAGGCCT	X	-	132705210-132705259	XqF1	Mus musculus transcription elongation factor A (SII)-like 8 (Tceal8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	3930402F23Rik	3930402F23Rik
Mus musculus	MEEBO	ILMN_216966	ILMN_216966	1700023F06RIK	scl39486.4.1_56	XM_126649.3			38091846	XM_126649.3	1700023F06Rik		ILMN_2677532	007650593	S	1087	CCTCCCCTTCGCCAGCCTGTTTCCAGAGATGTGCTATGAAGAGCTTGTAC										
Mus musculus	RefSeq	ILMN_200959	ILMN_200959	LOC381917	XM_355934.1	XM_355934.1			38087390	XM_355934.1	LOC381917		ILMN_1213108	006550451	S	9398	CACCATGTCCTGGATTGTGAAAGTTGGTTCACTTGCGGTCTTAGTGGCTC										
Mus musculus	RefSeq	ILMN_196169	ILMN_196169	TYR	NM_011661.3	NM_011661.3		22173	146134520	NM_011661.3	Tyr	NP_035791.1	ILMN_2522236	001690379	S	2858	CCCAGTGCCTTGTATATGCAATGCAAGCATTTTCTTGTACTCTGCTACCT				7qD3-qE1	Mus musculus tyrosinase (Tyr), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IMP]; The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-tyrosine + L-DOPA + O2 = L-DOPA + DOPAquinone + H2O [goid 4503] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	albino; c; skc35	albino; c; skc35
Mus musculus	RefSeq	ILMN_223382	ILMN_223382	ORC1L	NM_011015.1	NM_011015.1		18392	6754943	NM_011015.1	Orc1l	NP_035145.1	ILMN_2763347	003520553	S	2657	AAATTTCTGCTTTGTCTCAGAGCTTTATTTTATTTCTTCAGAACATGGAA	4	+	108287101-108287150	4qC7	Mus musculus origin recognition complex, subunit 1-like (S.cereviaiae) (Orc1l), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]	AA545195; MmORC1; Orc1	AA545195; MmORC1; Orc1
Mus musculus	RefSeq	ILMN_253261	ILMN_223382	ORC1L	NM_011015.1	NM_011015.1		18392	6754943	NM_011015.1	Orc1l	NP_035145.1	ILMN_3163514	003440392	A	2415	CCGTCGGTCAGGACTAGAGGAAGCAACCTTTCAACAGATATACAGTCAGC	4	+	108285735-108285761:108286886-108286908	4qC7	Mus musculus origin recognition complex, subunit 1-like (S.cereviaiae) (Orc1l), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence TAS]	AA545195; MmORC1; Orc1	AA545195; MmORC1; Orc1
Mus musculus	RefSeq	ILMN_209130	ILMN_209130	RGS4	NM_009062.3	NM_009062.3		19736	145301626	NM_009062.3	Rgs4	NP_033088.2	ILMN_1244081	004780128	S	2038	GAGGTAAGAGCTTGTTCACCCCATCCCAAACACCAAGGCTAGCAGAGACC				1qH3	Mus musculus regulator of G-protein signaling 4 (Rgs4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	ESTM48; AA004315; AA597169; ESTM50	ESTM48; AA004315; AA597169; ESTM50
Mus musculus	MEEBO	ILMN_212712	ILMN_212712	PTPRN	scl16598.23.1_93	NM_008985.1			6679564	NM_008985.1	Ptprn		ILMN_1245627	007380343	S	3353	CGTCCCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [evidence TAS]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence TAS]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214045	ILMN_214045	HAS2	NM_008216.2	NM_008216.2		15117	6996920	NM_008216.2	Has2	NP_032242.2	ILMN_1254975	002900692	S	3921	CGTTCAAGTTCTGAAAAACTCCGACTCTCGCCGTATGGAGAGCTAGTGGG	15	-	56497413-56497462	15qD1	Mus musculus hyaluronan synthase 2 (Has2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-D-glucuronate + UDP-N-acetyl-D-glucosamine = [beta-N-acetyl-D-glucosaminyl(1,4)beta-D-glucuronosyl(1,3)](n) + 2n UDP [goid 50501] [evidence IEA]		
Mus musculus	Riken	ILMN_205871	ILMN_205871	C130037N15RIK	ri|C130037N15|PX00169M03|AK048151|2774					AK048151	C130037N15Rik		ILMN_1238749	006660048	S	2507	GTGGTGAGGATGTGGGGAAAGGGGAAGAACCATTCACTCTGGAAGTGGCC										
Mus musculus	RefSeq	ILMN_201327	ILMN_201327	LOC382451	XM_356513.1	XM_356513.1			38090943	XM_356513.1	LOC382451		ILMN_1241421	003460750	S	3	GACTGGTTATCTTACATGCATCGGCTGCCGAGTGCAGATGCTGCCACAGG										
Mus musculus	RefSeq	ILMN_213789	ILMN_213789	CDKN2A	NM_009877.2	NM_009877.2		12578	98986443	NM_009877.2	Cdkn2a	NP_034007.1	ILMN_1226950	005390546	S	699	CTTCACTTCTAGCGATGCTAGCGTGTCTAGCATGTGGCTTTAAAAAATAC	4	-	88920557-88920606	4qC4	Mus musculus cyclin-dependent kinase inhibitor 2A (Cdkn2a), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]; A structure found in the nucleolus, which contains nearly completed preribosomal particles destined for the cytoplasm [goid 1652] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity, the catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 51444] [evidence IDA]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33088] [evidence IMP]; Any process that activates, maintains or increases the rate of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 43517] [evidence IC ]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Stops, prevents or reduces the activity of a ubiquitin-protein ligase [goid 55105] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p16; MTS1; p16(INK4a); Arf; p16INK4a; Pctr1; INK4a-ARF; ARF-INK4a; p19ARF	p16; MTS1; p16(INK4a); Arf; p16INK4a; Pctr1; INK4a-ARF; ARF-INK4a; p19ARF
Mus musculus	RefSeq	ILMN_213789	ILMN_213789	CDKN2A	NM_009877.2	NM_009877.2		12578	98986443	NM_009877.2	Cdkn2a	NP_034007.1	ILMN_1221177	004590280	S	161	TTTTCTTGGTGAAGTTCGTGCGATCCCGGAGACCCAGGACAGCGAGCTGC	4	-	88940313-88940362	4qC4	Mus musculus cyclin-dependent kinase inhibitor 2A (Cdkn2a), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]; A structure found in the nucleolus, which contains nearly completed preribosomal particles destined for the cytoplasm [goid 1652] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity, the catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 51444] [evidence IDA]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33088] [evidence IMP]; Any process that activates, maintains or increases the rate of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 43517] [evidence IC ]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Stops, prevents or reduces the activity of a ubiquitin-protein ligase [goid 55105] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p16; MTS1; p16(INK4a); Arf; p16INK4a; Pctr1; INK4a-ARF; ARF-INK4a; p19ARF	p16; MTS1; p16(INK4a); Arf; p16INK4a; Pctr1; INK4a-ARF; ARF-INK4a; p19ARF
Mus musculus	RefSeq	ILMN_215775	ILMN_215775	GDF6	NM_013526.1	NM_013526.1		242316	41529817	NM_013526.1	Gdf6	NP_038554.1	ILMN_2663449	004760082	S	3447	GGAGGTCGATTGATATACAAAACATTTTTACAGTATACCTTCTTGGACGA	4	+	9789407-9789456	4qA1	Mus musculus growth differentiation factor 6 (Gdf6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	GDF16; BMP13	GDF16; BMP13
Mus musculus	RefSeq	ILMN_210533	ILMN_210533	GPSN2	NM_134118.1	NM_134118.1		106529	19923069	NM_134118.1	Gpsn2	NP_598879.1	ILMN_2994779	005900333	S	964	AAACACCGCAGCTACCTGAAGGAGTTCCGCGACTACCCGCCCCTGCGCAT	8	-	86461937-86461986	8qC2	Mus musculus glycoprotein, synaptic 2 (Gpsn2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]	D17Ertd178e; 2410016D23Rik; AI173355; A230102P12Rik; SC2	D17Ertd178e; 2410016D23Rik; AI173355; A230102P12Rik; SC2
Mus musculus	RefSeq	ILMN_221035	ILMN_244952	MUP2	NM_008647.3	NM_008647.3		17841	113930711	NM_008647.3	Mup2	NP_032673.3	ILMN_2730208	002100538	S	571	TTGACCTATCCAATGCCAATCGCTGCCTCCAGGCCCGAGAATGAAGAATG	4	-	60149860-60149866:60149867-60149892:60150056-60150072	4qB3	Mus musculus major urinary protein 2 (Mup2), transcript variant 1, mRNA.				Mup-2; AA589603; MGC117823	Mup-2; AA589603; MGC117823
Mus musculus	RefSeq	ILMN_244952	ILMN_244952	MUP2	NM_008647.3	NM_008647.3		17841	113930711	NM_008647.3	Mup2	NP_032673.3	ILMN_3143404	007050706	A	512	CATCAAGGAAAGGTTTGCACAACTATGTGAGGAGCATGGAATCCTTAGAG	4	-	60150082-60150131	4qB3	Mus musculus major urinary protein 2 (Mup2), transcript variant 1, mRNA.				Mup-2; AA589603; MGC117823	Mup-2; AA589603; MGC117823
Mus musculus	RefSeq	ILMN_244952	ILMN_244952	MUP2	NM_008647.3	NM_008647.3		17841	113930711	NM_008647.3	Mup2	NP_032673.3	ILMN_3065459	005570435	I	839	TGAATTTCTTCCTCTTCCTGTTCAATAAATGATTACCCTTGCACTTAAAA	4	-	60147731-60147732:60148804-60148851	4qB3	Mus musculus major urinary protein 2 (Mup2), transcript variant 1, mRNA.				Mup-2; AA589603; MGC117823	Mup-2; AA589603; MGC117823
Mus musculus	RefSeq	ILMN_201138	ILMN_233868	INPP4B	NM_001024617.2	NM_001024617.2		234515	118131212	NM_001024617.2	Inpp4b	NP_001019788.1	ILMN_1229245	002940064	S	383	ACCCGGTGGAGCAGACCCTGACGAGGTACTCCAGCACAGAAATTGTGGAG	8	+	84292062-84292111	8qC2	Mus musculus inositol polyphosphate-4-phosphatase, type II (Inpp4b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of molecular signals in which a cell uses a water-soluble inositol phosphate to convert an extracellular signal into a response [goid 48016] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence ISO]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 34597] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 3,4-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 16316] [evidence IEA]	E130107I17Rik	E130107I17Rik
Mus musculus	RefSeq	ILMN_233868	ILMN_233868	INPP4B	NM_001024617.2	NM_001024617.2		234515	118131212	NM_001024617.2	Inpp4b	NP_001019788.1	ILMN_2854354	003990044	S	3614	GCGCCATTTTTAGCACCTGTGACTTTTGTACTGCTGGAGAGGAACGGCTG	8	+	84645952-84646001	8qC2	Mus musculus inositol polyphosphate-4-phosphatase, type II (Inpp4b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of molecular signals in which a cell uses a water-soluble inositol phosphate to convert an extracellular signal into a response [goid 48016] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence ISO]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 34597] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 3,4-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 16316] [evidence IEA]	E130107I17Rik	E130107I17Rik
Mus musculus	Riken	ILMN_202418	ILMN_202418	LTA4H	ri|1500005J05|ZX00042I07|AK005161|992					AK005161	Lta4h		ILMN_1237180	003170646	S	396	CCCCACTTTTACATCAGCACTCTCTCCTTCGCCTTCCACGTATGACGGTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: (7E,9E,11Z,14Z)-(5S,6S)-5,6-epoxyicosa-7,9,11,14-tetraenoate + H2O = (6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate [goid 4463] [evidence IEA]		
Mus musculus	Riken	ILMN_206503	ILMN_206503	PNN	ri|D630007J20|PX00196P01|AK085295|2953					AK085295	Pnn		ILMN_1224089	005560327	S	2628	ATCCCTGGTGTCGCTCAGGTGTTTGTCCAGGTTTGTGTGAGTAGAATCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence ISO]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220681	ILMN_220681	AURKC	NM_020572.2	NM_020572.2		20871	124378043	NM_020572.2	Aurkc	NP_065597.2	ILMN_3136523	007050059	A	632	GAGGAGAGCTCTATAAGGAGCTTCAGAGACATCAGAAGTTGGACCAGCAG	7	+	6950302-6950351	7qA1	Mus musculus aurora kinase C (Aurkc), transcript variant 3, mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Stk13; AIE1; AIK3	Stk13; AIE1; AIK3
Mus musculus	RefSeq	ILMN_219821	ILMN_219821	B9D1	NM_013717.2	NM_013717.2		27078	142367793	NM_013717.2	B9d1	NP_038745.1	ILMN_2713969	002000451	S	643	CCCACAATAAAAATCAGCCCTTCTGTCCGCCACTGTGGACCAGATGCCCT	11	+	61326287-61326296:61326297-61326336	11qB2	Mus musculus B9 protein domain 1 (B9d1), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW045994; B9	AW045994; B9
Mus musculus	Riken	ILMN_205969	ILMN_205969	D130059O18RIK	ri|D130059O18|PX00185A22|AK051608|1931					AK051608	D130059O18Rik		ILMN_1240406	000290736	S	91	CGACAGCAGCCTTTTGCCATTAGACGCAGGGTGATGGTGAGGATTCCAAG										
Mus musculus	Riken	ILMN_207058	ILMN_207058	ROBO1	ri|5730422G13|PX00644A23|AK077498|2118					AK077498	Robo1		ILMN_1219959	004390433	S	2013	GGAGAGAATGTGAGTAATATCTGGGTTTGCCCGGACTTTCCAGAGGGTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]	Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_223347	ILMN_313769	AI606181	XR_035118.1	XR_035118.1		226118	149270591	XR_035118.1	AI606181		ILMN_2762863	001300091	S	2698	CTAACCTTGACATCTGTGAGCTTTTTCAAGGCGCTTATTTTATTGCAGCA				19qC3	PREDICTED: Mus musculus expressed sequence AI606181 (AI606181), misc RNA.					
Mus musculus	RefSeq	ILMN_199718	ILMN_199718	LOC383857	XM_357296.1	XM_357296.1			38076527	XM_357296.1	LOC383857		ILMN_2536229	000380164	S	1637	CCCAGGGCGCACTTGAGCGAGGACCAGAAACGCGATGCTTCTCATTAAGC										
Mus musculus	RefSeq	ILMN_213275	ILMN_213275	PNKD	NM_019999.2	NM_019999.2		56695	87239998	NM_019999.2	Pnkd	NP_064383.1	ILMN_1221275	004880184	S	112	AGCTGCCAAGAACAGCGGGGTTTCCGCGGCCTCCTCATGACGCGCAGCCA	1	+	74379295-74379344	1qC3	Mus musculus paroxysmal nonkinesiogenic dyskinesia (Pnkd), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2810403H05Rik; Tahccp2; 2210013N15Rik; MNCb-5687; Brp17; MR-1; AI854243	2810403H05Rik; Tahccp2; 2210013N15Rik; MNCb-5687; Brp17; MR-1; AI854243
Mus musculus	Riken	ILMN_206902	ILMN_206902	F830012F06RIK	ri|F830012F06|PL00005G08|AK089736|1301					AK089736	F830012F06Rik		ILMN_1242539	004230687	S	938	CCCCCAACAGTATACAAGAAAAGGGCACCAGAAGTCCCTAACACCCCGGG										
Mus musculus	RefSeq	ILMN_198035	ILMN_198035	LOC277045	XM_203578.3	XM_203578.3			38080752	XM_203578.3	LOC277045		ILMN_2530252	004760050	S	123	GCACGTGGTGGGACATGTGGCTCTAGCTGTATATGTAGATGAGGATGGCC										
Mus musculus	RefSeq	ILMN_188053	ILMN_322858	PWWP2B	NM_001098636.1	NM_001098636.1		101631	148839363	NM_001098636.1	Pwwp2b	NP_001092106.1	ILMN_1246291	002490364	S	2335	GGAACCTAGTCGCATCTCTTCCACATTCCACTCAAAGCATGGGTCCCTGG				7qF4	Mus musculus PWWP domain containing 2B (Pwwp2b), transcript variant 1, mRNA.				D7Ertd517e; D930023J19Rik; AI594893	D7Ertd517e; D930023J19Rik; AI594893
Mus musculus	RefSeq	ILMN_217150	ILMN_217150	FHL4	NM_010214.3	NM_010214.3		14202	141802955	NM_010214.3	Fhl4	NP_034344.2	ILMN_2679626	006840681	S	1806	CACATGATGTGAGAAACATAGGCAATAAACCTTCCACTGAGATGTTCCAG	10	-	84560491-84560540	10qC1	Mus musculus four and a half LIM domains 4 (Fhl4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190077	ILMN_190077	A630098A13RIK	scl45576.1_26				31343257	NM_177291	A630098A13Rik		ILMN_2754083	002750014	S	1045	AGTCAGTAACACAGTGGAGATAAATGAGGCTTCTCAGGGAATTGGGGGGT										
Mus musculus	RefSeq	ILMN_224028	ILMN_236590	LY6F	NM_008530.2	NM_008530.2		17071	144922617	NM_008530.2	Ly6f	NP_032556.1	ILMN_1213836	000610349	S	459	ATCTGGGCTCGGTCTTCCTGCAGACCTTGCTGTAAAAGGTCCTTCCAAGG	15	+	75102246-75102280:75102281-75102295	15qD3	Mus musculus lymphocyte antigen 6 complex, locus F (Ly6f), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]				
Mus musculus	Riken	ILMN_203642	ILMN_203642	CHRNA7	ri|9330163M16|PX00106K24|AK034208|2815					AK034208	Chrna7		ILMN_1225456	002510148	S	2578	GCTTCTCTGTCTGGAGATGGGGATCTACTCTATTCCTGAGCTGGTGTGGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [evidence IMP]; Any process that modulates the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 32225] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IMP]; The type of sexual cycle seen in female mammals, with physiologic changes in the endometrium that recur at regular intervals during the reproductive years [goid 42698] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IGI]; Any process that activates, maintains or increases the frequency, rate or extent of heart contraction as a result of the baroreceptor response to decreased blood pressure [goid 1988] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine [goid 14061] [evidence IMP]; A change in the behavior of an organism as a result of an ethanol stimulus [goid 48149] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a food stimulus; food is anything which, when taken into the body, serves to nourish or build up the tissues or to supply body heat [goid 32094] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence ISO]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISO]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence ISO]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 beta production [goid 32691] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [evidence IMP]; The process which controls the timing of the type of sexual cycle seen in female mammals [goid 60112] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence ISO]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [evidence IMP];  [goid 4889] [evidence IDA];  [goid 4889] [evidence ISO];  [goid 4889] [evidence IMP]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]		
Mus musculus	Riken	ILMN_204806	ILMN_204806	9230104M06RIK	ri|9230104M06|PX00061H19|AK033757|1964					AK033757	9230104M06Rik		ILMN_1226577	002480600	S	1644	AGCACTCCAGAGGTAGGGGCAGGTGAATCTCTGTGAATTAGAGGCCAGCC										
Mus musculus	RefSeq	ILMN_234416	ILMN_234416	PPP2R5C	NM_001081458.1	NM_001081458.1		26931	125346153	NM_001081458.1	Ppp2r5c	NP_001074927.1	ILMN_3121851	001240397	A	671	CCACCCTGCACAGAATCTATGGGAAGTTCTTAGGCCTGCGTGCTTACATC	12	+	111784033-111784082	12qF1	Mus musculus protein phosphatase 2, regulatory subunit B (B56), gamma isoform (Ppp2r5c), transcript variant 3, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence ISO]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0044; D12Bwg0916e; AI060890; 2610043M05Rik; AW545884; 2700063L20Rik	mKIAA0044; D12Bwg0916e; AI060890; 2610043M05Rik; AW545884; 2700063L20Rik
Mus musculus	RefSeq	ILMN_234416	ILMN_234416	PPP2R5C	NM_001081458.1	NM_001081458.1		26931	125346153	NM_001081458.1	Ppp2r5c	NP_001074927.1	ILMN_3046283	004250372	I	1517	CCCCAGGAAGGGAGGCCAACGTCACTAACACTGTATGTGCAAATGTCCGC	12	+	111809049-111809098	12qF1	Mus musculus protein phosphatase 2, regulatory subunit B (B56), gamma isoform (Ppp2r5c), transcript variant 3, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence ISO]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0044; D12Bwg0916e; AI060890; 2610043M05Rik; AW545884; 2700063L20Rik	mKIAA0044; D12Bwg0916e; AI060890; 2610043M05Rik; AW545884; 2700063L20Rik
Mus musculus	RefSeq	ILMN_230391	ILMN_230391	PRR5	NM_146061.4	NM_146061.4		109270	121583638	NM_146061.4	Prr5	NP_666173.4	ILMN_2977350	004280300	S	1656	CCCACCCTTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCT	15	+	84533924-84533973	15qE2	Mus musculus proline rich 5 (renal) (Prr5), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence ISO]	Prr5; MGC32512; AU043908; C030017C09Rik; C78947	Prr5; MGC32512; AU043908; C030017C09Rik; C78947
Mus musculus	RefSeq	ILMN_194632	ILMN_230391	PRR5	NM_146061.4	NM_146061.4		109270	121583638	NM_146061.4	Prr5	NP_666173.4	ILMN_2653275	003940025	S	124	TTGCTGCTAGCCGCCGACTATCGTCGTAGGGGACGCGGGGGCGCGTGTGG	15	+	84511551-84511600	15qE2	Mus musculus proline rich 5 (renal) (Prr5), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence ISO]	Prr5; MGC32512; AU043908; C030017C09Rik; C78947	Prr5; MGC32512; AU043908; C030017C09Rik; C78947
Mus musculus	RefSeq	ILMN_197510	ILMN_197510	LOC239151	XM_154842.2	XM_154842.2			38076362	XM_154842.2	LOC239151		ILMN_1213345	001980386	S	2132	TCGGGGTGGGGCATGGAATCACTGAGAAGGTCAAGGGCAGCATCACTACC										
Mus musculus	RefSeq	ILMN_216000	ILMN_216000	ATP5SL	NM_025504.4	NM_025504.4		66349	146135019	NM_025504.4	Atp5sl	NP_079780.2	ILMN_2666225	005270131	S	2157	GGCACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGCGGGGACTT				7qA3	Mus musculus ATP5S-like (Atp5sl), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C030044E10Rik	C030044E10Rik
Mus musculus	RefSeq	ILMN_200784	ILMN_235293	LOC634955	XM_977987.1	XM_977987.1		634955	94408639	XM_977987.1	LOC634955	XP_983081.1	ILMN_1220537	002360451	S	53	TGTGTGGCACCTCTTCTCCTCAACATGACAACACAAGACACAGCACTTCC					PREDICTED: Mus musculus similar to CG30404-PA, isoform A (LOC634955), mRNA.					
Mus musculus	RefSeq	ILMN_187812	ILMN_255544	TBCD	NM_029878.2	NM_029878.2		108903	142362876	NM_029878.2	Tbcd	NP_084154.1	ILMN_2624397	003450301	S	3830	AAGCACGTCTGTGACAGCAAACGTATGGGCAGTCCCGGCCACCAGAGCAA	11	+	121478455-121478482	11qE2	Mus musculus tubulin-specific chaperone d (Tbcd), mRNA.				mKIAA0988; 2310057L06Rik; A030005L14Rik	mKIAA0988; 2310057L06Rik; A030005L14Rik
Mus musculus	RefSeq	ILMN_211620	ILMN_211620	ISG20L2	NM_177663.2	NM_177663.2		229504	31343581	NM_177663.2	Isg20l2	NP_808331.1	ILMN_2996667	001710504	S	2523	CTCAGCATAATGGTCTGTAATCTCAGGACTCTGGAGGCCAAGGCAGGGAG	3	+	88026243-88026292	3qF1	Mus musculus interferon stimulated exonuclease gene 20-like 2 (Isg20l2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]	4930429N24; C80587	4930429N24; C80587
Mus musculus	MEEBO	ILMN_184848	ILMN_184848	PDGFC	scl23066.7_4				31560372	NM_019971	Pdgfc		ILMN_1214186	000010326	S	20	TCTGGCTATTTTGGGGACAAGTGTAAGTGTTCGTCTAAGTGTATGTGGTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity [goid 7171] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]	Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217704	ILMN_217704	ARD1A	NM_019870.2	NM_019870.2		56292	57528431	NM_019870.2	Ard1a	NP_063923.1	ILMN_2724191	004040491	S	865	CAACCTTGCCCCATGTGCTTTTACAATAAATGTCACCCAGTGGCCTTGGG	X	-	71164309-71164338:71164432-71164451	XqA7.3	Mus musculus ARD1 homolog A, N-acetyltransferase (S. cerevisiae) (Ard1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IDA]; Catalysis of the acetylation of the N-terminal amino acid residue of a peptide or protein, according to the reaction: acetyl-CoA + peptide = CoA + N-alpha-acetylpeptide [goid 4596] [evidence IEA]	Te2; 2310039H09Rik	Te2; 2310039H09Rik
Mus musculus	RefSeq	ILMN_219251	ILMN_219251	CISD1	NM_134007.4	NM_134007.4		52637	146149273	NM_134007.4	Cisd1	NP_598768.1	ILMN_2706205	000110576	S	910	GCTTTAATGTTGTTCTCCTTAAACTTGCCCGGGTCACCAATAAAGGGGCA				10qB5.3	Mus musculus CDGSH iron sulfur domain 1 (Cisd1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]		Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]	AU043990; mitoNEET; D10Ertd214e; AW743335; Zcd1	AU043990; mitoNEET; D10Ertd214e; AW743335; Zcd1
Mus musculus	Riken	ILMN_205981	ILMN_205981	D130059C03RIK	ri|D130059C03|PX00185I20|AK051596|1596					AK051596	D130059C03Rik		ILMN_2576647	001190538	S	1495	GGCTTTACCATGTGACTTACAAGCATACATACCCATTAGAAAACTTCCCC										
Mus musculus	MEEBO	ILMN_194307	ILMN_194307	1500012M23RIK	scl51175.1.1_77						1500012M23Rik		ILMN_2505258	003520195	S	19	GAGTCTTAGAATCTCCTAACAGTATATTGTCATGTTGGGGTAAGGAAGTC										
Mus musculus	RefSeq	ILMN_211270	ILMN_255089	1110037F02RIK	NM_001081183.1	NM_001081183.1		66185	124487144	NM_001081183.1	1110037F02Rik	NP_001074652.1	ILMN_1242212	000270494	S	6571	TTGACCAAGGAGCCATATTTCCCCTAAGGTATGTCTTAATTCATTGAGCC	4	+	11477746-11477795	4qA1	Mus musculus RIKEN cDNA 1110037F02 gene (1110037F02Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		RP23-242O9.1; mKIAA1429; 4930422M05Rik	RP23-242O9.1; mKIAA1429; 4930422M05Rik
Mus musculus	RefSeq	ILMN_211270	ILMN_255089	1110037F02RIK	NM_001081183.1	NM_001081183.1		66185	124487144	NM_001081183.1	1110037F02Rik	NP_001074652.1	ILMN_1223282	005270376	S	5542	AGCTTCTAGAGGCCGCGGGGGCCTGGGACCGTCCTGGGCTAGTACAAATA	4	+	11476717-11476766	4qA1	Mus musculus RIKEN cDNA 1110037F02 gene (1110037F02Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		RP23-242O9.1; mKIAA1429; 4930422M05Rik	RP23-242O9.1; mKIAA1429; 4930422M05Rik
Mus musculus	Riken	ILMN_205666	ILMN_205666	B930059G07RIK	ri|B930059G07|PX00164L22|AK047415|1833					AK047415	B930059G07Rik		ILMN_1245051	001300474	S	1632	GTCTGAGCCTTGCTGGGTGTCTGTGTTTATGGTGGGACCTTCGAAAGCCG										
Mus musculus	RefSeq	ILMN_218182	ILMN_218182	FZD2	NM_020510.2	NM_020510.2		57265	125628663	NM_020510.2	Fzd2	NP_065256.1	ILMN_2939666	006520164	S	2936	TAGCCTCTGTGTTGGCAAACCCTGGGATCTTTGGCGCTTCCGTTCCCTTC	11	+	102468680-102468729	11qE1	Mus musculus frizzled homolog 2 (Drosophila) (Fzd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IGI]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Fz10; AW456835; AL033370; Fzd10; Mfz10a; Mfz10	Fz10; AW456835; AL033370; Fzd10; Mfz10a; Mfz10
Mus musculus	MEEBO	ILMN_220744	ILMN_220744	6530403H02RIK	scl0320739.3_119	XM_358589.1			38077005	XM_358589.1	6530403H02Rik		ILMN_2726210	007160008	S	413	GGACTGTCTGGAAGAGAGCCCGTGGAAGTCACTGTATTTTGCAGAAGCTG										
Mus musculus	RefSeq	ILMN_210963	ILMN_311585	4933406B17RIK	XM_001477792.1	XM_001477792.1		71040	149259266	XM_001477792.1	4933406B17Rik	XP_001477842.1	ILMN_2611065	006380435	S	1171	CCAGCCAAGTGGAAGCATTGTGCAAATCTGCAACCGCCTCTGCATCATGA				8qD1	PREDICTED: Mus musculus RIKEN cDNA 4933406B17 gene (4933406B17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219440	ILMN_219440	DNAJC17	NM_139139.1	NM_139139.1		69408	20982830	NM_139139.1	Dnajc17	NP_631878.1	ILMN_2708920	002450747	S	723	TGACAACCCTCTGAAGGTTTCCTGGTTGGAGGGACAGCCCCAGAGCACAG	2	-	119005116-119005165	2qE5	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 17 (Dnajc17), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	1700025B16Rik; D9Bwg1371e; C87112	1700025B16Rik; D9Bwg1371e; C87112
Mus musculus	RefSeq	ILMN_214996	ILMN_228097	CMYA1	XM_993589.1	XM_993589.1		22437	94387759	XM_993589.1	Cmya1	XP_998683.1	ILMN_1231765	004900279	S	5625	GACACTGCTCTCTGTTTGAGATTGGACTAAAGGCTCCAGAAAAACCCGGG				9qF4	PREDICTED: Mus musculus cardiomyopathy associated 1, transcript variant 2 (Cmya1), mRNA.					
Mus musculus	RefSeq	ILMN_242106	ILMN_242106	PARL	NM_001005767.1	NM_001005767.1		381038	54261812	NM_001005767.1	Parl	NP_001005767.1	ILMN_2884646	006180341	S	1188	GACGGTGCATCTGATCCTTGCTGCTTGGAAAGTCTCAGCATCGGCCACCC	16	-	20193448-20193497	16qA3	Mus musculus presenilin associated, rhomboid-like (Parl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PSENIP2; Psarl; D16Ertd607e; PSARL1; PRO2207	PSENIP2; Psarl; D16Ertd607e; PSARL1; PRO2207
Mus musculus	RefSeq	ILMN_185003	ILMN_246194	TSC1	NM_022887.3	NM_022887.3		64930	144922702	NM_022887.3	Tsc1	NP_075025.2	ILMN_2423383	003290327	S	7615	GGTTTGCTGTCTTTAGAATGTTCTAAAATGTCAAGGCAGTTGCTTGTGTT	2	+	28546605-28546654	2qA3	Mus musculus tuberous sclerosis 1 (Tsc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IGI]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IGI]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]	Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [evidence IPI]	mKIAA0243; hamartin	mKIAA0243; hamartin
Mus musculus	RefSeq	ILMN_185003	ILMN_246194	TSC1	NM_022887.3	NM_022887.3		64930	144922702	NM_022887.3	Tsc1	NP_075025.2	ILMN_2465589	006020491	S	3498	GCGAGAGCCAGTGTGATGAGGACAGCGTGACCATGAGTAGCAGCAGCCTT	2	+	28542488-28542537	2qA3	Mus musculus tuberous sclerosis 1 (Tsc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IGI]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IGI]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]	Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [evidence IPI]	mKIAA0243; hamartin	mKIAA0243; hamartin
Mus musculus	Riken	ILMN_204744	ILMN_204744	B930050E02RIK	ri|B930050E02|PX00164D03|AK047334|2494					AK047334	B930050E02Rik		ILMN_1236345	002360301	S	2168	GAAGACATTTCTAGCCAGCTTTCGTTCTAAGTGTCAGCAGCGGCCCCGGC										
Mus musculus	MEEBO	ILMN_220997	ILMN_220997	PVRL1	scl058235.6_27	XM_147334.1			20888028	XM_147334.1	Pvrl1		ILMN_2732940	001050328	S	1143	ACCCGCCCATGGCACAGAACCTGCAGTACCCGGATGACTCGGATGATGAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence IMP]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]		
Mus musculus	RefSeq	ILMN_230205	ILMN_230205	2410018G20RIK	NM_029354.1	NM_029354.1		72083	21312987	NM_029354.1	2410018G20Rik	NP_083630.1	ILMN_2908780	006280408	S	763	ATCGGCAGAACGTGGAAGCCGTGAAAGACCCATCCAGAGAATGCCACGCC	16	-	15762216-15762265	16qA2	Mus musculus RIKEN cDNA 2410018G20 gene (2410018G20Rik), mRNA.				2610001E06Rik	2610001E06Rik
Mus musculus	MEEBO	ILMN_192341	ILMN_192341	SCL0001946.1_187	scl0001946.1_187	AK016297.1			12854973	AK016297.1	scl0001946.1_187		ILMN_1239689	007210603	S	5	CTGTCGCCGCCGCTCAGGGTGTAAGTCAATGTGAAGCAGCAGTTCCAGCC										
Mus musculus	RefSeq	ILMN_209604	ILMN_209604	KCTD8	NM_175519.4	NM_175519.4		243043	65301476	NM_175519.4	Kctd8	NP_780728.3	ILMN_1224865	002490692	S	2249	GACCCAAATATACAACTGTTTAAATGTTAATGCAATAAAACAAGTATTAT	5	-	69501114-69501163	5qC3.1	Mus musculus potassium channel tetramerisation domain containing 8 (Kctd8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	A730087N02Rik	A730087N02Rik
Mus musculus	RefSeq	ILMN_221227	ILMN_221227	UNC45B	NM_178680.3	NM_178680.3		217012	54607168	NM_178680.3	Unc45b	NP_848795.2	ILMN_3074890	000830019	I	873	TCACCAGCCACCTGCTGGACATGCTGGTCAGTAAGAAAGTGTCTGGGCAG	11	+	82733259-82733308	11qC	Mus musculus unc-45 homolog B (C. elegans) (Unc45b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Cmya4; Unc45; MGC91090; AA445617; D230041A13Rik	Cmya4; Unc45; MGC91090; AA445617; D230041A13Rik
Mus musculus	RefSeq	ILMN_221227	ILMN_221227	UNC45B	NM_178680.3	NM_178680.3		217012	54607168	NM_178680.3	Unc45b	NP_848795.2	ILMN_3153940	006040026	A	3065	CTGTGATCAGAAAGCAGGTCAGACAATTCTGCAGGCCAGATAACGGGCTG	11	+	82756497-82756546	11qC	Mus musculus unc-45 homolog B (C. elegans) (Unc45b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Cmya4; Unc45; MGC91090; AA445617; D230041A13Rik	Cmya4; Unc45; MGC91090; AA445617; D230041A13Rik
Mus musculus	RefSeq	ILMN_186143	ILMN_236622	DIP2B	NM_172819.2	NM_172819.2		239667	142362828	NM_172819.2	Dip2b	NP_766407.1	ILMN_2611098	000450026	S	3785	GATATAGAGACCTCCGTGTCCCGCGTCCACAGGAGCATTGCTGAATGTGC	15	+	100042492-100042538:100045609-100045611	15qF1	Mus musculus DIP2 disco-interacting protein 2 homolog B (Drosophila) (Dip2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	AI317237; AI854602; KIAA1463; 4932422C22; mKIAA1463	AI317237; AI854602; KIAA1463; 4932422C22; mKIAA1463
Mus musculus	RefSeq	ILMN_222359	ILMN_222359	COX11	NM_199008.2	NM_199008.2		69802	110625799	NM_199008.2	Cox11	NP_950173.1	ILMN_1247397	002760364	S	721	GATCCTGAATTTGCAGAAGATCCAAGAATGGTGAATGTCGACCTCATCAC	11	+	90505753-90505802	11qD	Mus musculus COX11 homolog, cytochrome c oxidase assembly protein (yeast) (Cox11), nuclear gene encoding mitochondrial protein, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2010004I09Rik	2010004I09Rik
Mus musculus	MEEBO	ILMN_194176	ILMN_194176	SUHW4	scl36736.27_57				31542197	NM_146224	Suhw4		ILMN_2764152	000830575	S	3590	CTTTTGGACCATATTCAGATGACCACTTCTTATTTTATTGTGTTCCTTGC										
Mus musculus	RefSeq	ILMN_199149	ILMN_233632	TRPV1	NM_001001445.1	NM_001001445.1		193034	47825363	NM_001001445.1	Trpv1	NP_001001445.1	ILMN_1249973	001240278	S	2359	AACTGGAAGAACTTTGCCCTGGTTCCCCTTCTGAGGGACGCAAGCACTCG	11	+	73073848-73073897	11qB4	Mus musculus transient receptor potential cation channel, subfamily V, member 1 (Trpv1), mRNA.	A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus [goid 9268] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus [goid 9268] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive a temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. Thermoception in larger animals is mainly done in the skin; mammals have at least two types of sensor, for detecting heat (temperatures above body temperature) and cold (temperatures below body temperature) [goid 50955] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The series of events involved in the perception of pain in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50968] [evidence IDA]; The series of events involved in the perception of pain in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50968] [evidence IMP]; The regression phase of the hair cycle during which cell proliferation ceases, the hair follicle shortens, and an anchored club hair is produced [goid 42637] [evidence IMP]; The series of events required for an organism to receive a sensory mechanical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50954] [evidence IMP]; The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body [goid 60083] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract [goid 14832] [evidence IMP]; The process that results in increased metabolic rate in tissues of an organism. It is triggered by the detection of dietary excess. This process is achieved via signalling in the sympathetic nervous system [goid 2024] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus [goid 42221] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; The regulated release of a peptide from a cell or group of cells [goid 2790] [evidence IMP]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	VR-1; OTRPC1; TRPV1beta; TRPV1alpha; Vr1	VR-1; OTRPC1; TRPV1beta; TRPV1alpha; Vr1
Mus musculus	RefSeq	ILMN_233632	ILMN_233632	TRPV1	NM_001001445.1	NM_001001445.1		193034	47825363	NM_001001445.1	Trpv1	NP_001001445.1	ILMN_2918381	001510170	S	2167	TCCGGCAAGCTGCTGCAGGTGGGGTTCACGCCGGACGGCAAGGATGACTT	11	+	73067758-73067807	11qB4	Mus musculus transient receptor potential cation channel, subfamily V, member 1 (Trpv1), mRNA.	A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence ISA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus [goid 9268] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus [goid 9268] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive a temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. Thermoception in larger animals is mainly done in the skin; mammals have at least two types of sensor, for detecting heat (temperatures above body temperature) and cold (temperatures below body temperature) [goid 50955] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The series of events involved in the perception of pain in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50968] [evidence IDA]; The series of events involved in the perception of pain in which a sensory chemical stimulus is received by a cell and converted into a molecular signal [goid 50968] [evidence IMP]; The regression phase of the hair cycle during which cell proliferation ceases, the hair follicle shortens, and an anchored club hair is produced [goid 42637] [evidence IMP]; The series of events required for an organism to receive a sensory mechanical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50954] [evidence IMP]; The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body [goid 60083] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract [goid 14832] [evidence IMP]; The process that results in increased metabolic rate in tissues of an organism. It is triggered by the detection of dietary excess. This process is achieved via signalling in the sympathetic nervous system [goid 2024] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus [goid 42221] [evidence IMP]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; The regulated release of a peptide from a cell or group of cells [goid 2790] [evidence IMP]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence ISO]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IMP]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	VR-1; OTRPC1; TRPV1beta; TRPV1alpha; Vr1	VR-1; OTRPC1; TRPV1beta; TRPV1alpha; Vr1
Mus musculus	RefSeq	ILMN_228530	ILMN_228530	LIF	NM_001039537.1	NM_001039537.1		16878	88014735	NM_001039537.1	Lif	NP_001034626.1	ILMN_3137291	007210154	A	3050	CCCACCTGGCAGCTTTGAAGGCTCAGGGACCAATGGACTCTCTCCGTGCA	11	+	4171769-4171818	11qA1	Mus musculus leukemia inhibitory factor (Lif), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [evidence ISO]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence ISO]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IDA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of meiosis [goid 45835] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42503] [evidence IDA]; The process by which the anatomical structures of muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 48644] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IMP]; Interacting selectively with the leukemia inhibitory factor receptor [goid 5146] [evidence ISO]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISO]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_228530	ILMN_228530	LIF	NM_001039537.1	NM_001039537.1		16878	88014735	NM_001039537.1	Lif	NP_001034626.1	ILMN_3137287	003130059	A	3454	GCCTGCTCTCTGGAGCAGACATGGTATGTGGGCCAGGACCCCGGAGTCTT	11	+	4172173-4172222	11qA1	Mus musculus leukemia inhibitory factor (Lif), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [evidence ISO]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence ISO]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence ISO]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IMP]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [evidence IDA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of meiosis [goid 45835] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42503] [evidence IDA]; The process by which the anatomical structures of muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 48644] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IMP]; Interacting selectively with the leukemia inhibitory factor receptor [goid 5146] [evidence ISO]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence ISO]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	Riken	ILMN_203026	ILMN_203026	ZFP106	ri|6030432E05|PX00056P14|AK031440|2984					AK031440	Zfp106		ILMN_1217961	006330762	S	2693	ACCAACCAAAAACCCTCTCACACCGGTCTCCCTAGAGTTGTTAGCTTAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect [goid 1515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210624	ILMN_230242	SDCCAG1	NM_025441.2	NM_025441.2		66244	32130520	NM_025441.2	Sdccag1	NP_079717.2	ILMN_1247242	004590441	S	1809	TCCACGGACTTTGACTGAAGCAGGCACAATGGCACTTTGCTACAGTGCTG	12	-	70428670-70428719	12qC2	Mus musculus serologically defined colon cancer antigen 1 (Sdccag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1500011I12Rik; 4933405E14Rik	1500011I12Rik; 4933405E14Rik
Mus musculus	RefSeq	ILMN_210624	ILMN_230242	SDCCAG1	NM_025441.2	NM_025441.2		66244	32130520	NM_025441.2	Sdccag1	NP_079717.2	ILMN_2607522	005890121	S	3107	CCTTGAACAGTTTCATGCACTCCAAAGAAGCCACAGCAAGAGAAAAAGAC	12	-	70413259-70413308	12qC2	Mus musculus serologically defined colon cancer antigen 1 (Sdccag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1500011I12Rik; 4933405E14Rik	1500011I12Rik; 4933405E14Rik
Mus musculus	RefSeq	ILMN_210624	ILMN_230242	SDCCAG1	NM_025441.2	NM_025441.2		66244	32130520	NM_025441.2	Sdccag1	NP_079717.2	ILMN_1224862	005550259	S	3136	GCCACAGCAAGAGAAAAAGACTTATTCCGAAGTGTGAAGGACACAGATTT	12	-	70413056-70413067:70413242-70413279	12qC2	Mus musculus serologically defined colon cancer antigen 1 (Sdccag1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1500011I12Rik; 4933405E14Rik	1500011I12Rik; 4933405E14Rik
Mus musculus	RefSeq	ILMN_218125	ILMN_218125	NDUFS1	NM_145518.1	NM_145518.1		227197	21704019	NM_145518.1	Ndufs1	NP_663493.1	ILMN_2691936	004120673	S	2472	GTTTAAAATGTATGTAATTGTGTGCAAGCATTAACTAGTTTAATAAAACT	1	-	63190196-63190245	1qC2	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 1 (Ndufs1), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP [goid 42773] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	9930026A05Rik; MGC7850; 5830412M15Rik; MGC19199	9930026A05Rik; MGC7850; 5830412M15Rik; MGC19199
Mus musculus	RefSeq	ILMN_209313	ILMN_209313	GFM1	NM_138591.1	NM_138591.1		28030	20070401	NM_138591.1	Gfm1	NP_613057.1	ILMN_1248254	006520372	S	1967	GGAGCACACCACATGGTTGATTCGAATGAAATCTCTTTCATCCGAGCTGG	3	+	67273466-67273515	3qE1	Mus musculus G elongation factor, mitochondrial 1 (Gfm1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	Gfm; D3Wsu133e; AW545374	Gfm; D3Wsu133e; AW545374
Mus musculus	Riken	ILMN_202702	ILMN_202702	4933425L21RIK	ri|4933425L21|PX00020D13|AK019858|1054					AK019858	4933425L21Rik		ILMN_1221235	007610348	S	850	GCGTTTATTCAGCGCAGGTCAGCTGGTGAGGAAGAGGGAAGAACACAGCC										
Mus musculus	MEEBO	ILMN_210609	ILMN_210609	ACAD9	scl00229211.2_16	NM_172678.2			31559882	NM_172678.2	Acad9		ILMN_2656805	003170301	S	1643	GTTAAAGCGGGTAGCCAACATCCTCATCAACTTGTATGGCATGACTGCTG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187207	ILMN_187207	TRIP12	NM_133975.4	NM_133975.4		14897	91932790	NM_133975.4	Trip12	NP_598736.4	ILMN_1237986	006840241	S	6116	ATTGCCGGACTACTCGAGCATTGACATAATGCGGGACAAACTCTTGATAG	1	-	84721230-84721279	1qC5	Mus musculus thyroid hormone receptor interactor 12 (Trip12), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	6720416K24Rik; 1110036I07Rik; AA410158; MGC31615; Gtl6	6720416K24Rik; 1110036I07Rik; AA410158; MGC31615; Gtl6
Mus musculus	RefSeq	ILMN_187207	ILMN_187207	TRIP12	NM_133975.4	NM_133975.4		14897	91932790	NM_133975.4	Trip12	NP_598736.4	ILMN_2504698	006280520	S	6118	TGCCGGACTACTCGAGCATTGACATAATGCGGGACAAACTCTTGATAGCA	1	-	84721228-84721277	1qC5	Mus musculus thyroid hormone receptor interactor 12 (Trip12), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	6720416K24Rik; 1110036I07Rik; AA410158; MGC31615; Gtl6	6720416K24Rik; 1110036I07Rik; AA410158; MGC31615; Gtl6
Mus musculus	RefSeq	ILMN_191070	ILMN_187207	TRIP12	NM_133975.4	NM_133975.4		14897	91932790	NM_133975.4	Trip12	NP_598736.4	ILMN_1217984	001500746	S	9237	ACAGGCCACTGGAAAGTCGCGGTTACCCAGACAAGTAGTAGCTCTGGCAC	1	-	84718109-84718158	1qC5	Mus musculus thyroid hormone receptor interactor 12 (Trip12), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	6720416K24Rik; 1110036I07Rik; AA410158; MGC31615; Gtl6	6720416K24Rik; 1110036I07Rik; AA410158; MGC31615; Gtl6
Mus musculus	RefSeq	ILMN_187207	ILMN_187207	TRIP12	NM_133975.4	NM_133975.4		14897	91932790	NM_133975.4	Trip12	NP_598736.4	ILMN_2510364	003170072	S	6464	TTTCAAAGGGATGTTTTTTCAGGCTGGAACAATAAATGTCGCTGTGCAGT	1	-	84720882-84720931	1qC5	Mus musculus thyroid hormone receptor interactor 12 (Trip12), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	6720416K24Rik; 1110036I07Rik; AA410158; MGC31615; Gtl6	6720416K24Rik; 1110036I07Rik; AA410158; MGC31615; Gtl6
Mus musculus	Riken	ILMN_201858	ILMN_201858	6330411I15RIK	ri|6330411I15|PX00008D16|AK018160|2050					AK018160	6330411I15Rik		ILMN_2545142	003310608	S	1662	GCTTTAATGAGGGTGAAGCAGGGAATGGTGTCTCTTAGAACAGGGGGGAG										
Mus musculus	RefSeq	ILMN_208976	ILMN_249069	CLMN	NM_001040682.1	NM_001040682.1		94040	100816902	NM_001040682.1	Clmn	NP_001035772.1	ILMN_1241142	005910750	S	3068	CCCGCCCAACGACTCTCTGACGCAGTTTGTACAGCAGCCCGACGTGATAT	12	-	106010075-106010124	12qE	Mus musculus calmin (Clmn), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AI428889; 9330188N17Rik; KIAA1188; mKIAA1188	AI428889; 9330188N17Rik; KIAA1188; mKIAA1188
Mus musculus	RefSeq	ILMN_219245	ILMN_219245	REV3L	NM_011264.3	NM_011264.3		19714	153792336	NM_011264.3	Rev3l	NP_035394.2	ILMN_1236221	005080301	S	9843	CATGCTGCTCTCTGGATAGCTTACTTCTTACAATGTACAAATTCCGCATC				10qB1	Mus musculus REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae) (Rev3l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Rev3; Rev; Sez4	Rev3; Rev; Sez4
Mus musculus	RefSeq	ILMN_213039	ILMN_213039	OLFR722	NM_146494.2	NM_146494.2		258487	34328366	NM_146494.2	Olfr722	NP_666705.1	ILMN_2893483	007400100	S	1358	GAGAATAGTTACAATAGAGTTAAGGGATGTAGAAGCAGCAGAATGTGACC	14	-	50514107-50514156	14qC1	Mus musculus olfactory receptor 722 (Olfr722), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR241-3	MOR241-3
Mus musculus	RefSeq	ILMN_213039	ILMN_213039	OLFR722	NM_146494.2	NM_146494.2		258487	34328366	NM_146494.2	Olfr722	NP_666705.1	ILMN_2632903	004220687	S	867	GGTCATCTTTCCTTTGATGAATCCTGTGATCTATACACTTCGCAACCAGG	14	-	50514598-50514647	14qC1	Mus musculus olfactory receptor 722 (Olfr722), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR241-3	MOR241-3
Mus musculus	RefSeq	ILMN_251203	ILMN_251203	9030624J02RIK	NM_027815.2	NM_027815.2		71517	47271399	NM_027815.2	9030624J02Rik	NP_082091.2	ILMN_2872639	001190647	S	2758	CTGTCAACCTATGGCACCTGGCACAGAGACACGGCTGTGCAGACACAAGG	7	+	118631797-118631846	7qF2	Mus musculus RIKEN cDNA 9030624J02 gene (9030624J02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610029J22Rik	2610029J22Rik
Mus musculus	RefSeq	ILMN_188115	ILMN_188115	TYRO3	NM_019392.2	NM_019392.2		22174	68989242	NM_019392.2	Tyro3	NP_062265.2	ILMN_2449917	000160292	S	3026	GGTAGCCCTCCCAAGCTGTGCTGGCGCCTGGACGGACCAAATTGCCCAAT	2	+	119642877-119642926	2qE5	Mus musculus TYRO3 protein tyrosine kinase 3 (Tyro3), mRNA. XM_925062	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Sky; Brt; Rse; Tif; Etk-2; Dtk; AI323366	Sky; Brt; Rse; Tif; Etk-2; Dtk; AI323366
Mus musculus	MEEBO	ILMN_192852	ILMN_192852	ANKFY1	scl41304.26_52				27369498	NM_009671	Ankfy1		ILMN_1236881	002900113	S	6869	GGCAGCTGTGTGAAACTGGCCGTTCCATGATATCTTATGGTACCAAGGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence NAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211035	ILMN_314118	LOC100045644	XM_001474709.1	XM_001474709.1		100045644	149269950	XM_001474709.1	LOC100045644	XP_001474759.1	ILMN_1239177	003610326	S	357	TGAGTGAAGCCACTCCCAGGCTGATGCTCTCCTCCTGTGCCCGGTGACTG					PREDICTED: Mus musculus hypothetical protein LOC100045644 (LOC100045644), mRNA.					
Mus musculus	MEEBO	ILMN_213884	ILMN_213884	CHI3L3	scl012655.1_87				6753415	NM_009892	Chi3l3		ILMN_2712986	003870242	S	1167	CACAGTGCAAGTTGCAAGGGCCCTTATTGAGAGGAGCTTTACACAATGAT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]	Interacting selectively with chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 8061] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence TAS]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IDA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IDA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191147	ILMN_191147	SCL0002223.1_98	scl0002223.1_98	AK047780.1			26338965	AK047780.1	scl0002223.1_98		ILMN_1252974	002370044	S	1023	AGGTTGTTGGTGCCTGAAGTGACTGGAGGGCTAGAGGGATAGGTCATTTG										
Mus musculus	MEEBO	ILMN_191147	ILMN_191147	SCL0002223.1_98	scl0002223.1_98	AK047780.1			26338965	AK047780.1	scl0002223.1_98		ILMN_2476524	004900291	S	5	GATTACCCCTAAAGTGGAACGGGAGTGGCCGGATTCGCGAGCGAGGAAAG										
Mus musculus	Riken	ILMN_204026	ILMN_204026	A730006E03RIK	ri|A730006E03|PX00148L06|AK042561|937					AK042561	A730006E03Rik		ILMN_1244701	004150010	S	626	GGGAGCGATAGGCCTTGCGACCTCTTCCCCATACTGAATGTTAGCAGGCC										
Mus musculus	RefSeq	ILMN_188367	ILMN_247872	IL6ST	NM_010560.2	NM_010560.2		16195	37591174	NM_010560.2	Il6st	NP_034690.2	ILMN_2608184	005900575	S	5074	GAACATAGAGGCCACTGAAGGAAGAGCCTCCTGGAAGCAAGTTGGCACGT	13	+	113296729-113296778	13qD2.2	Mus musculus interleukin 6 signal transducer (Il6st), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that modulates the frequency, rate or extent of the Notch signaling pathway [goid 8593] [evidence IDA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with interleukin-11 [goid 19970] [evidence IDA]; Combining with interleukin-11 to initiate a change in cell activity [goid 4921] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	gp130; BB405851; CD130; AA389424; 5133400A03Rik; D13Ertd699e	gp130; BB405851; CD130; AA389424; 5133400A03Rik; D13Ertd699e
Mus musculus	RefSeq	ILMN_200857	ILMN_237064	SLC6A16	XM_914689.2	XM_914689.2		381884	94380321	XM_914689.2	Slc6a16	XP_919782.2	ILMN_1238830	005960239	S	2214	CCCGCTGGCTTTGCAGCACATTCCTGGCTGGGATCTTCCATTGTCATACA				7qB4	PREDICTED: Mus musculus solute carrier family 6, member 16 (Slc6a16), mRNA.					
Mus musculus	RefSeq	ILMN_212540	ILMN_212540	LPCAT2	NM_173014.1	NM_173014.1		270084	27370521	NM_173014.1	Lpcat2	NP_766602.1	ILMN_1248257	005290386	S	2235	AGCGCACACGCTCCCCTTGACTTGCATCTGGATAGCAGATCCTTTCGCAC	8	+	95442613-95442662	8qC5	Mus musculus lysophosphatidylcholine acyltransferase 2 (Lpcat2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli [goid 6663] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: 1-alkyl-sn-glycero-3-phosphocholine + acetyl-CoA = 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine + CoA [goid 47192] [evidence IDA]; Catalysis of the reaction: 1-acyl-sn-glycero-3-phosphocholine + acyl-CoA = phosphatidylcholine + CoA [goid 47184] [evidence IDA]	lpafat1; A330042H22	lpafat1; A330042H22
Mus musculus	RefSeq	ILMN_212540	ILMN_212540	LPCAT2	NM_173014.1	NM_173014.1		270084	27370521	NM_173014.1	Lpcat2	NP_766602.1	ILMN_2956973	006020451	S	2301	GGGACCTTGTTTTAAAGACGATTGCAGTGGGCCATAAGCTGGGAATTGCC	8	+	95442679-95442728	8qC5	Mus musculus lysophosphatidylcholine acyltransferase 2 (Lpcat2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli [goid 6663] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: 1-alkyl-sn-glycero-3-phosphocholine + acetyl-CoA = 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine + CoA [goid 47192] [evidence IDA]; Catalysis of the reaction: 1-acyl-sn-glycero-3-phosphocholine + acyl-CoA = phosphatidylcholine + CoA [goid 47184] [evidence IDA]	lpafat1; A330042H22	lpafat1; A330042H22
Mus musculus	RefSeq	ILMN_212540	ILMN_212540	LPCAT2	NM_173014.1	NM_173014.1		270084	27370521	NM_173014.1	Lpcat2	NP_766602.1	ILMN_2627920	004670390	S	301	CTCCCAGTCCGTGCTTTACTGGTTGGAATAATTTTGCTGCTCGCATGGCC	8	+	95388824-95388873	8qC5	Mus musculus lysophosphatidylcholine acyltransferase 2 (Lpcat2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli [goid 6663] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: 1-alkyl-sn-glycero-3-phosphocholine + acetyl-CoA = 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine + CoA [goid 47192] [evidence IDA]; Catalysis of the reaction: 1-acyl-sn-glycero-3-phosphocholine + acyl-CoA = phosphatidylcholine + CoA [goid 47184] [evidence IDA]	lpafat1; A330042H22	lpafat1; A330042H22
Mus musculus	RefSeq	ILMN_223593	ILMN_223593	HSPA2	NM_008301.4	NM_008301.4		15512	93004086	NM_008301.4	Hspa2	NP_032327.2	ILMN_3140383	005260095	A	1975	GAGTGTGCAACCCCATCATCAGCAAACTTTACCAAGGCGGTCCAGGCGGC	12	+	77507331-77507380	12qC3	Mus musculus heat shock protein 2 (Hspa2), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC7795; HSP70.2; 70kDa; MGC58299; HSP70A2; Hsp70-2	MGC7795; HSP70.2; 70kDa; MGC58299; HSP70A2; Hsp70-2
Mus musculus	RefSeq	ILMN_215598	ILMN_215598	COX7A1	NM_009944.3	NM_009944.3		12865	83816960	NM_009944.3	Cox7a1	NP_034074.1	ILMN_1240857	003360270	S	138	GGCAGAGAAGCAGAAGCTCTTCCAGGCCGACAATGACCTCCCAGTACACT	7	+	30970166-30970190:30970294-30970318	7qB1	Mus musculus cytochrome c oxidase, subunit VIIa 1 (Cox7a1), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence ISS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	COX7AH; COX7A; COX7AM	COX7AH; COX7A; COX7AM
Mus musculus	RefSeq	ILMN_199834	ILMN_199834	LOC383967	XM_357355.1	XM_357355.1			38077763	XM_357355.1	LOC383967		ILMN_1256874	001240274	S	427	CAGCCATTTGCTCAGGAAGATGGCAGGTATGGATCCAGCATGAGGGAATG										
Mus musculus	MEEBO	ILMN_192930	ILMN_192930	2900011L18RIK	scl43531.1.1_35						2900011L18Rik		ILMN_1226904	005220338	S	14	GGGCTAGCTTGATTCTTCATGGTATCCTTACCCAGTACTGACTTCTGGCC										
Mus musculus	RefSeq	ILMN_215230	ILMN_260426	METTL5	NM_029280.2	NM_029280.2		75422	141803077	NM_029280.2	Mettl5	NP_083556.1	ILMN_2685969	007510767	S	575	TACTCATTATCTAACAGAATGTCCAAGTTATTTGATACAGTAATTATGAA	2	-	69718852-69718901	2qC2	Mus musculus methyltransferase like 5 (Mettl5), mRNA. XM_892172 XM_899988 XM_909519 XM_921352 XM_982540	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IEA]; The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2810410A08Rik	2810410A08Rik
Mus musculus	Riken	ILMN_207001	ILMN_207001	6430557N21RIK	ri|6430557N21|PX00648P09|AK078271|668					AK078271	6430557N21Rik		ILMN_2584297	005270370	S	526	CAGTGGGTACTGGGAAGGACGGTTGTGGAGTGTCTCGGGAGGGTCTACAT										
Mus musculus	RefSeq	ILMN_222074	ILMN_222074	WWP2	NM_025830.3	NM_025830.3		66894	31543965	NM_025830.3	Wwp2	NP_080106.1	ILMN_2744245	003940379	S	1108	ACCACAACACCCGGACAACCACCTGGCAGCGCCCAACTGCTGAGTACGTG	8	+	110064568-110064617	8qD3	Mus musculus WW domain containing E3 ubiquitin protein ligase 2 (Wwp2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA690238; 1300010O06Rik; AIP2; AW554328	AA690238; 1300010O06Rik; AIP2; AW554328
Mus musculus	RefSeq	ILMN_222074	ILMN_222074	WWP2	NM_025830.3	NM_025830.3		66894	31543965	NM_025830.3	Wwp2	NP_080106.1	ILMN_1226970	004890241	S	4188	GCTAGCTAGCACCAAGTTGGTTGACAGATTGTTTTGTGATGCTTGCCCTG	8	+	110082402-110082451	8qD3	Mus musculus WW domain containing E3 ubiquitin protein ligase 2 (Wwp2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA690238; 1300010O06Rik; AIP2; AW554328	AA690238; 1300010O06Rik; AIP2; AW554328
Mus musculus	RefSeq	ILMN_222074	ILMN_222074	WWP2	NM_025830.3	NM_025830.3		66894	31543965	NM_025830.3	Wwp2	NP_080106.1	ILMN_2970167	006380192	S	3898	GGCCTTCTGAGGACAGTTCCATCCTACCTTTGTCCTTCCCTGGTACAGCC	8	+	110082112-110082161	8qD3	Mus musculus WW domain containing E3 ubiquitin protein ligase 2 (Wwp2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA690238; 1300010O06Rik; AIP2; AW554328	AA690238; 1300010O06Rik; AIP2; AW554328
Mus musculus	RefSeq	ILMN_213090	ILMN_213090	CHEK2	NM_016681.2	NM_016681.2		50883	31980652	NM_016681.2	Chek2	NP_057890.1	ILMN_2856599	006020497	S	2076	GTTAGGGGGTGGTGTTGAGAGATTAACACCACTCCTGTTGAGGGCTGCAG	5	+	111114264-111114313	5qF	Mus musculus CHK2 checkpoint homolog (S. pombe) (Chek2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A cascade of processes induced by the detection of DNA damage within a cell [goid 42770] [evidence IDA]; A cascade of processes induced by the detection of DNA damage within a cell [goid 42770] [evidence ISO]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	CHK2; Rad53; HUCDS1; Cds1	CHK2; Rad53; HUCDS1; Cds1
Mus musculus	MEEBO	ILMN_211188	ILMN_211188	MAP3K10	scl00062.1_38	XM_194344.3			38086167	XM_194344.3	Map3k10		ILMN_2613414	002630612	S	915	ATCGACGCCTTGGCCGTGGCTTACGGTGTGGCTATGAACAAGCTGACGCT							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]		
Mus musculus	RefSeq	ILMN_202523	ILMN_255505	1700067C01RIK	XM_994646.1	XM_994646.1		76718	94381970	XM_994646.1	1700067C01Rik	XP_999740.1	ILMN_1229337	005720086	S	903	GCATTGGTGTTCTGCCTGAATGCATGTCTATGGGAGGGTGTCAAGTGTCC				7qB1	PREDICTED: Mus musculus RIKEN cDNA 1700067C01 gene, transcript variant 2 (1700067C01Rik), mRNA.					
Mus musculus	Riken	ILMN_202296	ILMN_202296	4933406L09RIK	ri|4933406L09|PX00019L16|AK016701|2391					AK016701	4933406L09Rik		ILMN_1229141	005080465	S	2105	CCTCCTACACTTAGCTCTGCATGTAGACAACGCGCACCATTCTTAGATGC										
Mus musculus	MEEBO	ILMN_193330	ILMN_193330	2410015C20RIK	scl21801.4_112				20874883	XM_131053	2410015C20Rik		ILMN_2524231	004590010	S	833	CTCATGCGGACAACCCCAACCACAGCAGAGGAGGACAAAGAGAGGATCGG										
Mus musculus	RefSeq	ILMN_219425	ILMN_219425	OFD1	NM_177429.2	NM_177429.2		237222	31342288	NM_177429.2	Ofd1	NP_803178.1	ILMN_2708729	000780224	S	3305	CAGATGACATGTGGTAATAACATTAGCTGTCTAGTTTCTCACAAGAAGTC	X	-	162828914-162828947:162828948-162828963	XqF5	Mus musculus oral-facial-digital syndrome 1 gene homolog (human) (Ofd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence ISO]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]	The assembly and organization of a the bundle of microtubules and associated proteins that forms the core of cilia in eukaryotic cells and is responsible for their movements [goid 35083] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Cxorf5; DXGgc7e; ORF2	Cxorf5; DXGgc7e; ORF2
Mus musculus	RefSeq	ILMN_211755	ILMN_211755	ERAF	NM_133245.1	NM_133245.1		170812	18875417	NM_133245.1	Eraf	NP_573508.1	ILMN_2619200	006900440	S	381	AAAGGGTCTGGGCATCATGTCTTAGAACCCCAAACACTCGGCTCTGTGTT					Mus musculus erythroid associated factor (Eraf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IDA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IMP]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence IDA]; The chemical reactions and pathways involving hemoglobin, including its uptake and utilization [goid 20027] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IEA]	Interacting selectively with hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 30492] [evidence IEA]	AHSP; MGC130147; EDRF	AHSP; MGC130147; EDRF
Mus musculus	RefSeq	ILMN_216739	ILMN_216739	OLFR986	NM_146615.1	NM_146615.1		258608	33239359	NM_146615.1	Olfr986	NP_666826.1	ILMN_2891121	006060091	S	648	CATCTACATCTTATCCACCATCCTACGGATCCCTTCAGCCACTGGCCGCC	9	+	39995349-39995398	9qA5.1	Mus musculus olfactory receptor 986 (Olfr986), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR104-3	MOR104-3
Mus musculus	RefSeq	ILMN_214393	ILMN_250318	SLC41A3	NM_027868.2	NM_027868.2		71699	82734230	NM_027868.2	Slc41a3	NP_082144.2	ILMN_2647533	003710367	S	2056	CTGGGCTCATGCTACTAGTGCTCTGGGCCCAGTGACCATGCACCTTCACC	6	+	90596205-90596254	6qD1	Mus musculus solute carrier family 41, member 3 (Slc41a3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SLC41A1-L2; AI480742; 1010001P06Rik	SLC41A1-L2; AI480742; 1010001P06Rik
Mus musculus	RefSeq	ILMN_215955	ILMN_215955	GTSE1	NM_013882.1	NM_013882.1		29870	7305118	NM_013882.1	Gtse1	NP_038910.1	ILMN_1226369	006520594	S	2373	GACCTGGAGAAACAAATTTTAGAAGGAATTGTATTTGACAGGGGGAGCCC	15	+	85706714-85706763	15qE2	Mus musculus G two S phase expressed protein 1 (Gtse1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			Gtse-1; B99	Gtse-1; B99
Mus musculus	RefSeq	ILMN_215955	ILMN_215955	GTSE1	NM_013882.1	NM_013882.1		29870	7305118	NM_013882.1	Gtse1	NP_038910.1	ILMN_2908065	001780719	S	2261	GATCCAGCTGAGCCCTGAGGCTGACAAAGAGAACGTGGACTCACCGCTTC	15	+	85706602-85706651	15qE2	Mus musculus G two S phase expressed protein 1 (Gtse1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			Gtse-1; B99	Gtse-1; B99
Mus musculus	RefSeq	ILMN_215955	ILMN_215955	GTSE1	NM_013882.1	NM_013882.1		29870	7305118	NM_013882.1	Gtse1	NP_038910.1	ILMN_2908070	001500148	S	2487	CCCTGATCCCTGCCTTTCATCAGGCTGAAACACAGCTCTCTAGAAATTTT	15	+	85706828-85706877	15qE2	Mus musculus G two S phase expressed protein 1 (Gtse1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			Gtse-1; B99	Gtse-1; B99
Mus musculus	RefSeq	ILMN_191681	ILMN_225467	MPHOSPH9	NM_001081323.1	NM_001081323.1		269702	124486760	NM_001081323.1	Mphosph9	NP_001074792.1	ILMN_2481231	000840093	S	4307	TTTTATACTTAAAATGGCCACATATTTTCAAGATATTTTTGTTATGCTCA	5	-	124704837-124704886	5qF	Mus musculus M-phase phosphoprotein 9 (Mphosph9), mRNA.				B930097C17Rik; 4930548D04Rik; AW547060; MPP9; 9630025B04Rik; AW413446; MPP-9; C87456	B930097C17Rik; 4930548D04Rik; AW547060; MPP9; 9630025B04Rik; AW413446; MPP-9; C87456
Mus musculus	RefSeq	ILMN_191681	ILMN_225467	MPHOSPH9	NM_001081323.1	NM_001081323.1		269702	124486760	NM_001081323.1	Mphosph9	NP_001074792.1	ILMN_2708784	002810176	S	2422	CCGACACGTGGCCGACCTTCGTGCTTATTATGAGTCGGAGATAAGTAGTC	5	-	124747639-124747688	5qF	Mus musculus M-phase phosphoprotein 9 (Mphosph9), mRNA.				B930097C17Rik; 4930548D04Rik; AW547060; MPP9; 9630025B04Rik; AW413446; MPP-9; C87456	B930097C17Rik; 4930548D04Rik; AW547060; MPP9; 9630025B04Rik; AW413446; MPP-9; C87456
Mus musculus	RefSeq	ILMN_196240	ILMN_225467	MPHOSPH9	NM_001081323.1	NM_001081323.1		269702	124486760	NM_001081323.1	Mphosph9	NP_001074792.1	ILMN_1213786	002230685	S	7924	CCACGCATCTGCTGATCATTGCCTGCCTTGCCTTCACTGTGACTACAGAG	5	-	124701220-124701269	5qF	Mus musculus M-phase phosphoprotein 9 (Mphosph9), mRNA.				B930097C17Rik; 4930548D04Rik; AW547060; MPP9; 9630025B04Rik; AW413446; MPP-9; C87456	B930097C17Rik; 4930548D04Rik; AW547060; MPP9; 9630025B04Rik; AW413446; MPP-9; C87456
Mus musculus	RefSeq	ILMN_200528	ILMN_225467	MPHOSPH9	NM_001081323.1	NM_001081323.1		269702	124486760	NM_001081323.1	Mphosph9	NP_001074792.1	ILMN_1234970	004730471	S	3875	CTGGAGCAGTGTCAGCCGGGATCAGCAGCACCACAGGACAACGGTTTTGA	5	-	124710049-124710098	5qF	Mus musculus M-phase phosphoprotein 9 (Mphosph9), mRNA.				B930097C17Rik; 4930548D04Rik; AW547060; MPP9; 9630025B04Rik; AW413446; MPP-9; C87456	B930097C17Rik; 4930548D04Rik; AW547060; MPP9; 9630025B04Rik; AW413446; MPP-9; C87456
Mus musculus	RefSeq	ILMN_191681	ILMN_225467	MPHOSPH9	NM_001081323.1	NM_001081323.1		269702	124486760	NM_001081323.1	Mphosph9	NP_001074792.1	ILMN_1224001	002470167	S	1630	GGCACAGAGGCTGAAGCAGAACCAGTCAAAGCAGGCACATACAGAGGATG	5	-	124762769-124762818	5qF	Mus musculus M-phase phosphoprotein 9 (Mphosph9), mRNA.				B930097C17Rik; 4930548D04Rik; AW547060; MPP9; 9630025B04Rik; AW413446; MPP-9; C87456	B930097C17Rik; 4930548D04Rik; AW547060; MPP9; 9630025B04Rik; AW413446; MPP-9; C87456
Mus musculus	RefSeq	ILMN_185958	ILMN_234171	UGT1A5	NM_201643.2	NM_201643.2		394433	145699136	NM_201643.2	Ugt1a5	NP_964005.2	ILMN_1225154	007560491	S	809	GTACTCGACTACCCCAGGCCCATCATGCCTAACATGGTCTTCATTGGGGG				1qD	Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A5 (Ugt1a5), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218511	ILMN_218511	MMP11	NM_008606.2	NM_008606.2		17385	133893135	NM_008606.2	Mmp11	NP_032632.1	ILMN_2696711	005860315	S	1874	GTAATGAGATGCCCAGGGTACCATGCTGCCCCTGCTAAGCAACTGGACCA	10	-	75386652-75386701	10qC1	Mus musculus matrix metallopeptidase 11 (Mmp11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	ST3; Stmy3	ST3; Stmy3
Mus musculus	RefSeq	ILMN_209900	ILMN_209900	AKAP9	NM_194462.2	NM_194462.2		100986	125661047	NM_194462.2	Akap9	NP_919444.2	ILMN_2600268	003710600	S	11788	ACAGTAATCATTAAATTACATGTATATTTGTGGAATGCTAATTTAAGTGA	5	+	4079887-4079936	5qA1	Mus musculus A kinase (PRKA) anchor protein (yotiao) 9 (Akap9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AKAP450; AW545847; mKIAA0803; C79026; 5730481H23Rik	AKAP450; AW545847; mKIAA0803; C79026; 5730481H23Rik
Mus musculus	RefSeq	ILMN_209900	ILMN_209900	AKAP9	NM_194462.2	NM_194462.2		100986	125661047	NM_194462.2	Akap9	NP_919444.2	ILMN_2627300	005810255	S	11902	GCTGCTGGACGAGTACCTTGCGGTGCCCTGCGCTTTTCTTACAAAGCTAC	5	+	4080001-4080050	5qA1	Mus musculus A kinase (PRKA) anchor protein (yotiao) 9 (Akap9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AKAP450; AW545847; mKIAA0803; C79026; 5730481H23Rik	AKAP450; AW545847; mKIAA0803; C79026; 5730481H23Rik
Mus musculus	RefSeq	ILMN_209900	ILMN_209900	AKAP9	NM_194462.2	NM_194462.2		100986	125661047	NM_194462.2	Akap9	NP_919444.2	ILMN_2678495	005050400	S	1256	GATCCAAAGCCTGAAACTAGAACTGGGCAACTCTCAGCAGAACGAGCGGA	5	+	3960297-3960346	5qA1	Mus musculus A kinase (PRKA) anchor protein (yotiao) 9 (Akap9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AKAP450; AW545847; mKIAA0803; C79026; 5730481H23Rik	AKAP450; AW545847; mKIAA0803; C79026; 5730481H23Rik
Mus musculus	RefSeq	ILMN_223188	ILMN_223188	AGPS	NM_172666.2	NM_172666.2		228061	40254235	NM_172666.2	Agps	NP_766254.1	ILMN_2760514	007320270	S	5002	ACTCTGACATGCTAACCTGAAGTGTGTTGCTCCAAATGGGGCCAGCTTTG	2	+	75767065-75767114	2qC3	Mus musculus alkylglycerone phosphate synthase (Agps), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = 1-alkyl-glycerone 3-phosphate + a long-chain acid anion [goid 8609] [evidence ISO]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	9930035G10Rik; 5832437L22; ADHAPS; ADAP-S; ADPS; ALDHPSY; AW123847; ADAS	9930035G10Rik; 5832437L22; ADHAPS; ADAP-S; ADPS; ALDHPSY; AW123847; ADAS
Mus musculus	RefSeq	ILMN_223188	ILMN_223188	AGPS	NM_172666.2	NM_172666.2		228061	40254235	NM_172666.2	Agps	NP_766254.1	ILMN_2944765	006940598	S	5352	TGGCTTGGCTCAGGGCTCTATGCTCCATTATGAGCCATCTGCCTACAGAT	2	+	75767415-75767464	2qC3	Mus musculus alkylglycerone phosphate synthase (Agps), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = 1-alkyl-glycerone 3-phosphate + a long-chain acid anion [goid 8609] [evidence ISO]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	9930035G10Rik; 5832437L22; ADHAPS; ADAP-S; ADPS; ALDHPSY; AW123847; ADAS	9930035G10Rik; 5832437L22; ADHAPS; ADAP-S; ADPS; ALDHPSY; AW123847; ADAS
Mus musculus	RefSeq	ILMN_187633	ILMN_187633	TNFRSF9	NM_011612.2	NM_011612.2		21942	117422436	NM_011612.2	Tnfrsf9	NP_035742.1	ILMN_3103746	001300373	A	1787	AAGGCCGTTTAGGAAAGGGACAAAGCACTGTGAGGTGGGGAACACCTGTG	4	+	150319864-150319913	4qE2	Mus musculus tumor necrosis factor receptor superfamily, member 9 (Tnfrsf9), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AA408498; A930040I11Rik; 4-1BB; Ly63; Cd137; AI325004; CDw137; ILA	AA408498; A930040I11Rik; 4-1BB; Ly63; Cd137; AI325004; CDw137; ILA
Mus musculus	RefSeq	ILMN_187633	ILMN_187633	TNFRSF9	NM_011612.2	NM_011612.2		21942	117422436	NM_011612.2	Tnfrsf9	NP_035742.1	ILMN_2445789	000290132	S	959	CCTGTGGAACAGCACAAGCAACCCCACCACCCTGTTCTTACACATCATCC	4	+	150319036-150319085	4qE2	Mus musculus tumor necrosis factor receptor superfamily, member 9 (Tnfrsf9), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AA408498; A930040I11Rik; 4-1BB; Ly63; Cd137; AI325004; CDw137; ILA	AA408498; A930040I11Rik; 4-1BB; Ly63; Cd137; AI325004; CDw137; ILA
Mus musculus	RefSeq	ILMN_195813	ILMN_243528	LOC636017	XM_911266.2	XM_911266.2		636017	94411109	XM_911266.2	LOC636017	XP_916359.2	ILMN_2518964	000620768	S	177	GCCTGAACAGGGCCTGGAATGGATTGGATATATTTCTCCCGGAAATGGTG					PREDICTED: Mus musculus similar to Ig heavy chain V region 93G7 precursor (LOC636017), mRNA.					
Mus musculus	RefSeq	ILMN_214535	ILMN_214535	FNTA	NM_008033.2	NM_008033.2		14272	31982361	NM_008033.2	Fnta	NP_032059.1	ILMN_3136196	005960133	A	1530	GCGCCTGTTGGTTAGAGCTGCTGTGCGCACTCACAGGATCTTGCTATCAC	8	-	27464568-27464617	8qA2	Mus musculus farnesyltransferase, CAAX box, alpha (Fnta), mRNA.		The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is changed [goid 30548] [evidence IMP]; Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]; Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein [goid 8318] [evidence IEA]; Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate [goid 4660] [evidence IEA]; Catalysis of the reaction: geranylgeranyl diphosphate + protein-cysteine = S-geranylgeranyl-protein + diphosphate. This reaction is the formation of a thioether linkage between the C-1 atom of the geranylgeranyl group and a cysteine residue fourth from the C-terminus of the protein. The protein substrates have the C-terminal sequence CA1A2X, where the terminal residue, X, is preferably leucine and A2 should not be aromatic. Known substrates include most g-subunits of heterotrimeric G proteins and Ras-related GTPases such as members of the Ras and Rac/Rho families [goid 4662] [evidence IEA]	FTA	FTA
Mus musculus	RefSeq	ILMN_214535	ILMN_214535	FNTA	NM_008033.2	NM_008033.2		14272	31982361	NM_008033.2	Fnta	NP_032059.1	ILMN_3058975	006620743	I	1731	GCCAGTCTGGACTACATAGAGAGGTTTGGGCCAGTTCAGAATATAGAGGG	8	-	27464367-27464416	8qA2	Mus musculus farnesyltransferase, CAAX box, alpha (Fnta), mRNA.		The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is changed [goid 30548] [evidence IMP]; Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]; Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein [goid 8318] [evidence IEA]; Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate [goid 4660] [evidence IEA]; Catalysis of the reaction: geranylgeranyl diphosphate + protein-cysteine = S-geranylgeranyl-protein + diphosphate. This reaction is the formation of a thioether linkage between the C-1 atom of the geranylgeranyl group and a cysteine residue fourth from the C-terminus of the protein. The protein substrates have the C-terminal sequence CA1A2X, where the terminal residue, X, is preferably leucine and A2 should not be aromatic. Known substrates include most g-subunits of heterotrimeric G proteins and Ras-related GTPases such as members of the Ras and Rac/Rho families [goid 4662] [evidence IEA]	FTA	FTA
Mus musculus	RefSeq	ILMN_209524	ILMN_314988	FPR-RS4	XR_035254.1	XR_035254.1		14291	149268986	XR_035254.1	Fpr-rs4		ILMN_2596629	001400039	S	763	TTCCCTTTTCAATTAATTATGCTTTTAGGCAACATCTTTAACAATGAGAC				17qA3.2	PREDICTED: Mus musculus formyl peptide receptor, related sequence 4 (Fpr-rs4), misc RNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215244	ILMN_215244	TMEM85	NM_026519.1	NM_026519.1		68032	13386013	NM_026519.1	Tmem85	NP_080795.1	ILMN_2809247	005260754	S	694	GCATATGGACCTCATCTGCATTTTAAGCTGTTGACTCCTAAATATCCTCC	2	-	112164089-112164138	2qE3	Mus musculus transmembrane protein 85 (Tmem85), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610318K02Rik	2610318K02Rik
Mus musculus	RefSeq	ILMN_215244	ILMN_215244	TMEM85	NM_026519.1	NM_026519.1		68032	13386013	NM_026519.1	Tmem85	NP_080795.1	ILMN_2809239	003450491	S	762	GTGGAGAAGAGCCTCCTGTGGTGAGGCCAGTGTGCAGCATGTTACAGCAG	2	-	112164021-112164070	2qE3	Mus musculus transmembrane protein 85 (Tmem85), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2610318K02Rik	2610318K02Rik
Mus musculus	RefSeq	ILMN_218507	ILMN_218507	SVOPL	NM_177200.2	NM_177200.2		320590	31343051	NM_177200.2	Svopl	NP_796174.1	ILMN_2847727	000050465	S	2641	CCCCCATGAACTAGGTGTAGTGGTGTGTGTCTGTAATCCCATTGCTTGGG	6	-	37945120-37945169	6qB1	Mus musculus SV2 related protein homolog (rat)-like (Svopl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	9430071P14Rik	9430071P14Rik
Mus musculus	RefSeq	ILMN_204532	ILMN_229574	LOC668631	XR_002223.1	XR_002223.1		668631	94392484	XR_002223.1	LOC668631		ILMN_1225291	006980343	S	1158	CAATGGACTGCTGTTACGTGGACTGGGCTGATGGGGCGTGGTTGAGAGGT	12	+	21286764-21286813		PREDICTED: Mus musculus hypothetical protein LOC668631 (LOC668631), mRNA.					
Mus musculus	RefSeq	ILMN_212218	ILMN_212218	2010321M09RIK	NM_175153.3	NM_175153.3		69882	117647250	NM_175153.3	2010321M09Rik	NP_780362.2	ILMN_1217039	004670255	S	2660	GCTTCTGGTGTATCCCAAGGTACACATTTTTAGACTGTAACCACAATATG	9	+	64834338-64834387	9qC	Mus musculus RIKEN cDNA 2010321M09 gene (2010321M09Rik), transcript variant 1, mRNA.					
Mus musculus	RefSeq	ILMN_236586	ILMN_236586	PRB1	NM_198669.1	NM_198669.1		381833	38348571	NM_198669.1	Prb1	NP_941071.1	ILMN_3057618	000450059	I	1521	CCATCTGTTTCCTTACCAGAGAGAAGGTGAACAGAAGACAGATGACTTCA	6	-	132156863-132156887:132157146-132157170	6qG1	Mus musculus proline-rich protein BstNI subfamily 1 (Prb1), mRNA.				BC011176; Prpg2	BC011176; Prpg2
Mus musculus	RefSeq	ILMN_236586	ILMN_236586	PRB1	NM_198669.1	NM_198669.1		381833	38348571	NM_198669.1	Prb1	NP_941071.1	ILMN_3134706	003460438	A	430	GTTCTCAGGGACCCCCTATGCCTGTAAACCAACAAGGCCCACCCCCAAAG	6	-	132158212-132158261	6qG1	Mus musculus proline-rich protein BstNI subfamily 1 (Prb1), mRNA.				BC011176; Prpg2	BC011176; Prpg2
Mus musculus	RefSeq	ILMN_202184	ILMN_330649	LOC100046321	XM_001476330.1	XM_001476330.1		100046321	149254952	XM_001476330.1	LOC100046321	XP_001476380.1	ILMN_2547657	004040431	S	843	ATTGTTGCTGCTCAATCCATTTTATGAACTAAATGAAAAATAAAAGAAAG					PREDICTED: Mus musculus similar to coiled-coil-helix-coiled-coil-helix domain containing 3 (LOC100046321), mRNA.					
Mus musculus	RefSeq	ILMN_193272	ILMN_248122	SAPS1	NM_172894.2	NM_172894.2		243819	34536814	NM_172894.2	Saps1	NP_766482.2	ILMN_2603693	001070309	S	3437	ACAATAACTGGGCCAGCAGCTCTGAAGCACACCTTCCCCGTCTGTCCCAG	7	-	4583403-4583452	7qA1	Mus musculus SAPS domain family, member 1 (Saps1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with any protein phosphatase [goid 19903] [evidence ISA]	MGC62441; D030074N20Rik; Pp6r1; 2010309P17Rik; B430201G11Rik; mKIAA1115; AI836219	MGC62441; D030074N20Rik; Pp6r1; 2010309P17Rik; B430201G11Rik; mKIAA1115; AI836219
Mus musculus	MEEBO	ILMN_195541	ILMN_195541	SCL0002702.1_3805	scl0002702.1_3805	AK083781.1			26101487	AK083781.1	scl0002702.1_3805		ILMN_2516501	000290561	S	2	GGATCGACCAGCCTGTGCGAATTCTGCTTAATAGTTTGGGGTCTAGAGAG										
Mus musculus	RefSeq	ILMN_197892	ILMN_312773	LOC433716	XR_031539.1	XR_031539.1		433716	149252578	XR_031539.1	LOC433716		ILMN_1228599	000070402	S	462	CTGTCCGGGAACTCATCTTGAAACGTGGGCAAGCAAAGATAAGACAGTCC	4	+	69515424-69515473	4qC2	PREDICTED: Mus musculus similar to ribosomal protein L7-like 1 (LOC433716), misc RNA.					
Mus musculus	Riken	ILMN_202460	ILMN_202460	STX8	ri|4930571E13|PX00036N17|AK016271|1648					AK016271	Stx8		ILMN_2549783	004480309	S	862	TGTCTCTCTAGACACTGGACACTGCTAGCTCAGCCGCTCTTACAGCATCG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184343	ILMN_184343	TNIP1	NM_021327.1	NM_021327.1		57783	10946635	NM_021327.1	Tnip1	NP_067302.1	ILMN_2799361	001780091	S	2513	CTGCTCCTTGCCCCTCTGTGAGGAGTTACGGAGAGGGCTTTGTCTCTAGA	11	-	54724536-54724585	11qB1.3	Mus musculus TNFAIP3 interacting protein 1 (Tnip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			ABIN1; VAN; Nef; AU018810; Naf1; ABIN	ABIN1; VAN; Nef; AU018810; Naf1; ABIN
Mus musculus	RefSeq	ILMN_184343	ILMN_184343	TNIP1	NM_021327.1	NM_021327.1		57783	10946635	NM_021327.1	Tnip1	NP_067302.1	ILMN_1228123	006960747	S	170	GGGAGAGGTGTCCGCAGCTTTTGAACGTCTAGTGGAGGAGAATACTCGGC	11	-	54754245-54754294	11qB1.3	Mus musculus TNFAIP3 interacting protein 1 (Tnip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			ABIN1; VAN; Nef; AU018810; Naf1; ABIN	ABIN1; VAN; Nef; AU018810; Naf1; ABIN
Mus musculus	RefSeq	ILMN_184343	ILMN_184343	TNIP1	NM_021327.1	NM_021327.1		57783	10946635	NM_021327.1	Tnip1	NP_067302.1	ILMN_2498442	003120358	S	1364	CCCGCTCACAAGGCAACGAGAATACCAGGAGAAGGAGATCCAGCGGCTCA	11	-	54734267-54734316	11qB1.3	Mus musculus TNFAIP3 interacting protein 1 (Tnip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			ABIN1; VAN; Nef; AU018810; Naf1; ABIN	ABIN1; VAN; Nef; AU018810; Naf1; ABIN
Mus musculus	RefSeq	ILMN_184343	ILMN_184343	TNIP1	NM_021327.1	NM_021327.1		57783	10946635	NM_021327.1	Tnip1	NP_067302.1	ILMN_2417863	003170204	S	2429	CCAGGCTCTCCAGAGACCATACCCAACTCATGTGCATGTGCCGTTTTTGC	11	-	54724620-54724669	11qB1.3	Mus musculus TNFAIP3 interacting protein 1 (Tnip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]			ABIN1; VAN; Nef; AU018810; Naf1; ABIN	ABIN1; VAN; Nef; AU018810; Naf1; ABIN
Mus musculus	RefSeq	ILMN_219356	ILMN_233925	LOC669166	XM_973535.1	XM_973535.1		669166	94378775	XM_973535.1	LOC669166	XP_978629.1	ILMN_2775055	001690093	S	699	CTCCTGTGATATTTACATCTGGGCACCCTTGGCCGGAATCTGCGTGGCCC					PREDICTED: Mus musculus similar to T-cell surface glycoprotein CD8 alpha chain precursor (T-cell surface glycoprotein Lyt-2) (CD8a antigen) (LOC669166), mRNA.					
Mus musculus	MEEBO	ILMN_194005	ILMN_194005	4930486I03RIK	scl14727.3.1_80						4930486I03Rik		ILMN_2502455	007610414	S	19	GAAGTCTGAGTACCTCAGGGGGTTCCTGAGATGGAGGTCTGCATTGTGGA										
Mus musculus	Riken	ILMN_204297	ILMN_204297	PTPRN	ri|A830060N18|PX00155N18|AK043965|3361					AK043965	Ptprn		ILMN_1245729	002650377	S	1686	CCAGATTTTGCAGACAGGGGTGGGACAGATAATCGTTATGTACCTTCAGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [evidence TAS]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence TAS]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216435	ILMN_313215	LOC100048071	XR_034206.1	XR_034206.1		100048071	149263170	XR_034206.1	LOC100048071		ILMN_2671073	002940767	S	1669	GCAGACAAGGATGTCATTAATCGGCTGAAGCTTGTCGTCCAAATTTATGA					PREDICTED: Mus musculus similar to tsec-2 (LOC100048071), misc RNA.					
Mus musculus	RefSeq	ILMN_189500	ILMN_247504	RORA	XM_903197.2	XM_903197.2		19883	94386259	XM_903197.2	Rora	XP_908290.2	ILMN_2461812	006650154	S	307	TCTCCCTGCGCTCTCCGCACCGCGGCGTAAAGGATGTATTTTGTGATCGC				9qC	PREDICTED: Mus musculus RAR-related orphan receptor alpha, transcript variant 4 (Rora), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving cyclic GMP, guanosine 3',5'-phosphate [goid 46068] [evidence IMP]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; Any process that modulates the frequency or rate of macrophage activation [goid 43030] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198938	ILMN_198938	LOC235497	XM_134917.5	XM_134917.5			38089906	XM_134917.5	LOC235497		ILMN_2533459	004490019	S	1661	GGCTGGCCGTGACCCTGAGTGCCAGCGCACAGAGATGATTAAGAAAGAAG										
Mus musculus	MEEBO	ILMN_214953	ILMN_214953	SLC15A2	scl48500.22_173	XM_147213.1			20892436	XM_147213.1	Slc15a2		ILMN_2653860	006270682	S	3651	GTTCACGGCCCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Catalysis of the transfer of oligopeptide from one side of the membrane to the other. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15334] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185394	ILMN_228676	GOLGA3	NM_008146.3	NM_008146.3		269682	31982329	NM_008146.3	Golga3	NP_032172.3	ILMN_1260175	004540482	S	4706	CAAAACAGTGTTCCCAGAGACGGGCTGGGCCAATGACCACTGTTGTCCTC	5	+	110652063-110652098:110652099-110652112	5qF	Mus musculus golgi autoantigen, golgin subfamily a, 3 (Golga3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Mea-2; 5330413L04; AW490576; Mea2; AI449376; 5430416E01Rik	Mea-2; 5330413L04; AW490576; Mea2; AI449376; 5430416E01Rik
Mus musculus	RefSeq	ILMN_218820	ILMN_218820	2010107G23RIK	NM_027251.2	NM_027251.2		69894	31560106	NM_027251.2	2010107G23Rik	NP_081527.1	ILMN_2803564	003190095	S	1455	GTGTATTGAATGTCTGAGGTCTGTCTTGCTCAGGGGCTCAACCCAGGGGC	10	-	61503239-61503288	10qB4	Mus musculus RIKEN cDNA 2010107G23 gene (2010107G23Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA545165	AA545165
Mus musculus	RefSeq	ILMN_232835	ILMN_232835	SERTAD2	NM_001038625.1	NM_001038625.1		58172	84490402	NM_001038625.1	Sertad2	NP_001033714.1	ILMN_3151510	004670577	A	5285	TGGGGACGTGTTGGTGCGTGGGTTTTGAGGAAGGACGTGTGACCTTTCCC	11	+	20552792-20552841	11qA3.1	Mus musculus SERTA domain containing 2 (Sertad2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	mKIAA0127; AU021878; MNCb-1504; TRIP-Br2; AB041541; Kiaa0127; Sei2; SEI-2	mKIAA0127; AU021878; MNCb-1504; TRIP-Br2; AB041541; Kiaa0127; Sei2; SEI-2
Mus musculus	RefSeq	ILMN_255447	ILMN_255447	EG433634	NM_001013805.1	NM_001013805.1		433634	85701495	NM_001013805.1	EG433634	NP_001013827.1	ILMN_2844128	002630288	S	2677	TGGTAAACAGAGAATGGCCTTGCTGAAATGTTGTAGAGGTTGTTGGAGCC	3	-	104154608-104154657	3qF2.2	Mus musculus predicted gene, EG433634 (EG433634), mRNA.					
Mus musculus	Riken	ILMN_206654	ILMN_206654	E030004P15RIK	ri|E030004P15|PX00318G16|AK086856|1896					AK086856	E030004P15Rik		ILMN_2581690	001070280	S	1372	CCGAAACCAGTAGAAGAGAAAGTGGTGAAGAGCCTCGAAGATTTGGGCAC										
Mus musculus	RefSeq	ILMN_218692	ILMN_243956	4930443G12RIK	XM_910494.2	XM_910494.2		74686	94370292	XM_910494.2	4930443G12Rik	XP_915587.1	ILMN_1237307	006520544	S	1445	GGCATTGGCAGTGTGGCTCACGAACTAGTGAAAAGGCTTTTTGGATTAAT				3qF3	PREDICTED: Mus musculus RIKEN cDNA 4930443G12 gene (4930443G12Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_209347	ILMN_209347	SNAPIN	NM_133854.2	NM_133854.2		20615	31981593	NM_133854.2	Snapin	NP_598615.1	ILMN_2963906	004010091	S	1365	GCCAGTGTTAACCATCCTGTTACTCCTATTACTGGGGCTGGGCAGTTTCC	3	-	90292440-90292489	3qF1	Mus musculus SNAP-associated protein (Snapin), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence ISO]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence ISO]	Snap25bp; AV026596; 25kDa; AA407989	Snap25bp; AV026596; 25kDa; AA407989
Mus musculus	RefSeq	ILMN_209347	ILMN_209347	SNAPIN	NM_133854.2	NM_133854.2		20615	31981593	NM_133854.2	Snapin	NP_598615.1	ILMN_2594943	004220446	S	1612	CTGATGCATATTTTGGGGCCTATTTTGAGACATGAGAATGTGAGGTGATC	3	-	90292193-90292242	3qF1	Mus musculus SNAP-associated protein (Snapin), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence ISO]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence ISO]	Snap25bp; AV026596; 25kDa; AA407989	Snap25bp; AV026596; 25kDa; AA407989
Mus musculus	RefSeq	ILMN_197553	ILMN_323050	LOC666585	XR_033787.1	XR_033787.1		666585	149251068	XR_033787.1	LOC666585		ILMN_1248972	004810528	S	1399	GGAACAGAATGGGAACTTCGGAAGAGTCAGGCGAACTCTCTTCAAAATCT				3qD	PREDICTED: Mus musculus hypothetical LOC666585 (LOC666585), misc RNA.					
Mus musculus	MEEBO	ILMN_212292	ILMN_212292	D930031A20RIK	scl32059.2.1_50	NM_176910.2			31342367	NM_176910.2	D930031A20Rik		ILMN_1242301	003800209	S	863	CTCAGTCCCCGCTTTCTTAGGGTTGTCTCTACTTTCTGCTACATCGCCAT										
Mus musculus	Riken	ILMN_205110	ILMN_205110	D830050E09RIK	ri|D830050E09|PX00200K17|AK052939|3054					AK052939	D830050E09Rik		ILMN_2570071	000870494	S	2566	GTCCCAGCCCAGCTATTGTTGGTTGCATTGCGGCATTTGCTTATCTATGG										
Mus musculus	RefSeq	ILMN_194164	ILMN_259480	ZBTB43	NM_001025594.1	NM_001025594.1		71834	71037380	NM_001025594.1	Zbtb43	NP_001020765.1	ILMN_2503987	005360326	S	1564	GCAGAATACAACTGAGGCTAACTAAAAATAGGGTCTGGCCCTTGAGTGGC	2	-	33309191-33309216:33309217-33309240	2qB	Mus musculus zinc finger and BTB domain containing 43 (Zbtb43), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Zfp297b; mKIAA0414; 1700010E06Rik	Zfp297b; mKIAA0414; 1700010E06Rik
Mus musculus	RefSeq	ILMN_194164	ILMN_259480	ZBTB43	NM_001025594.1	NM_001025594.1		71834	71037380	NM_001025594.1	Zbtb43	NP_001020765.1	ILMN_2522541	000070097	S	4703	TCCTTTTATGAGGGTCCCAATGTTTCTTCCAGAAAGTTATTTTATTTATG	2	-	33306052-33306101	2qB	Mus musculus zinc finger and BTB domain containing 43 (Zbtb43), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Zfp297b; mKIAA0414; 1700010E06Rik	Zfp297b; mKIAA0414; 1700010E06Rik
Mus musculus	RefSeq	ILMN_209807	ILMN_209807	CREB3L2	NM_178661.2	NM_178661.2		208647	31340985	NM_178661.2	Creb3l2	NP_848776.1	ILMN_2956448	001230201	S	3025	GCCTTAACTAATTGGGGCTGGAGTTGGTCATTTTTGTACACCCACAGTGG	6	-	37260861-37260910	6qB1	Mus musculus cAMP responsive element binding protein 3-like 2 (Creb3l2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	C530025K05Rik; BBF2H7	C530025K05Rik; BBF2H7
Mus musculus	RefSeq	ILMN_246234	ILMN_246234	TMPRSS5	NM_030709.1	NM_030709.1		80893	13507651	NM_030709.1	Tmprss5	NP_109634.1	ILMN_2886194	006040524	S	1370	TGTGCAGAGCCCAATCGCCCAGGTGTCTATGCCAAGGTAGCAGAGTTCCT	9	+	48923648-48923697	9qA5.3	Mus musculus transmembrane protease, serine 5 (spinesin) (Tmprss5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	spinesin	spinesin
Mus musculus	RefSeq	ILMN_218122	ILMN_218122	4921517D21RIK	NM_026338.2	NM_026338.2		67722	141802953	NM_026338.2	4921517D21Rik	NP_080614.1	ILMN_2691901	000060630	S	3605	CCCGTGGGCTGTCTACAAATATCAGCTGTGAGCACATAAACTGGTTCTGC	9	+	107834404-107834434:107834435-107834453	9qF1	Mus musculus RIKEN cDNA 4921517D21 gene (4921517D21Rik), mRNA.				MGC141498	MGC141498
Mus musculus	RefSeq	ILMN_217992	ILMN_217992	5830405N20RIK	NM_183264.3	NM_183264.3		67596	146198633	NM_183264.3	5830405N20Rik	NP_899087.1	ILMN_2690214	002900307	S	1243	GGGACAAGCCAGACATGAGCTGACCAATCTTTAACTCAGCAGCTTCAGGA				10qD3	Mus musculus RIKEN cDNA 5830405N20 gene (5830405N20Rik), mRNA.				AI450549	AI450549
Mus musculus	MEEBO	ILMN_215490	ILMN_215490	BLVRA	scl20330.11.1_76	NM_026678.3			31982540	NM_026678.3	Blvra		ILMN_1257284	005890615	S	1072	GGAAGCTTCAGATACCTCTGAAACGGGGCCAGGGTTTGGTCTTATCAACA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISO]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 42167] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence ISO]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: bilirubin + NAD(P)+ = biliverdin + NAD(P)H + H+ [goid 4074] [evidence ISO]		
Mus musculus	RefSeq	ILMN_221286	ILMN_221286	FOXQ1	NM_008239.3	NM_008239.3		15220	31560692	NM_008239.3	Foxq1	NP_032265.3	ILMN_1224637	001850487	S	1911	CAGAGGATCAAAGCCGTTCTTTTCCATTTCTTGGCCAGGCCTGTACTCTC	13	+	31652216-31652265	13qA3.2	Mus musculus forkhead box Q1 (Foxq1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hfh1l; sa; Hfh1; HFH-1	Hfh1l; sa; Hfh1; HFH-1
Mus musculus	RefSeq	ILMN_189071	ILMN_316755	KRTAP17-1	NM_001099774.1	NM_001099774.1		77914	153791236	NM_001099774.1	Krtap17-1	NP_001093244.1	ILMN_2458087	001450279	S	464	CCTGACTCGTTTGCACCTCCAAGACAGCGACATGCCTCTCCTGTTATTTC				11qD	Mus musculus keratin associated protein 17-1 (Krtap17-1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			A030006P16Rik	A030006P16Rik
Mus musculus	RefSeq	ILMN_196788	ILMN_196788	LOC209590	XM_144762.1	XM_144762.1			20822980	XM_144762.1	LOC209590		ILMN_2525808	002600136	S	819	GAATAACCAAGTCCTGGCTCGCTCAAGCTGTGGGTTCCAGAACAGCTGTG										
Mus musculus	RefSeq	ILMN_201496	ILMN_201496	LOC382191	XM_356297.1	XM_356297.1			38094715	XM_356297.1	LOC382191		ILMN_1225162	000870278	S	74	CCGAAACCACGACACATCAGCTTAGATCACGAAACACTCCATGGCAGCCT										
Mus musculus	RefSeq	ILMN_249389	ILMN_249389	DGKH	NM_001081336.1	NM_001081336.1		380921	124486740	NM_001081336.1	Dgkh	NP_001074805.1	ILMN_3101919	006510717	A	3258	GTTAACGGAGATTCCCTGGCTTTATTACATCCTCCGCCCCAGTGAGGACG	14	-	78978497-78978546	14qD3	Mus musculus diacylglycerol kinase, eta (Dgkh), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]	The chemical reactions and pathways involving diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues. DAG is a normal intermediate in the biosynthesis of phosphatidyl phospholipids and is released from them by phospholipase C activity. DAG from phosphatidyl inositol polyphosphates is important in signal transduction [goid 46339] [evidence ISO]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence ISO]	D130015C16; MGC156865; 5930402B05Rik	D130015C16; MGC156865; 5930402B05Rik
Mus musculus	RefSeq	ILMN_197520	ILMN_249389	DGKH	NM_001081336.1	NM_001081336.1		380921	124486740	NM_001081336.1	Dgkh	NP_001074805.1	ILMN_1222579	003400753	S	2954	CGCATCTGTGACACTTCCTCTGTTGCCAGGTCAGGGGCGGGATGGATGTA	14	-	78984274-78984287:78985400-78985435	14qD3	Mus musculus diacylglycerol kinase, eta (Dgkh), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISO]	The chemical reactions and pathways involving diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues. DAG is a normal intermediate in the biosynthesis of phosphatidyl phospholipids and is released from them by phospholipase C activity. DAG from phosphatidyl inositol polyphosphates is important in signal transduction [goid 46339] [evidence ISO]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence ISO]	D130015C16; MGC156865; 5930402B05Rik	D130015C16; MGC156865; 5930402B05Rik
Mus musculus	Riken	ILMN_201688	ILMN_201688	ING1	ri|2610028J21|ZX00034I03|AK011594|1151					AK011594	Ing1		ILMN_1254882	004810379	S	927	CCACCTCACCTCGGATAGCGGAAACAGCCTGCGTCATCATGGTGTACAAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]		
Mus musculus	RefSeq	ILMN_195186	ILMN_246661	DNAHC17	XM_126677.7	XM_126677.7		69926	149262521	XM_126677.7	Dnahc17	XP_126677.7	ILMN_2524817	002650086	S	13201	TGGGACACCCAGACCGGAGTCATTGCTGAAGCCCGGTTGAAGGATCTGAC	11	-	117884753-117884802	11qE2	PREDICTED: Mus musculus dynein, axonemal, heavy chain 17 (Dnahc17), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201365	ILMN_246661	DNAHC17	XM_126677.7	XM_126677.7		69926	149262521	XM_126677.7	Dnahc17	XP_126677.7	ILMN_1215848	000610639	S	3033	TGAGGAGCTGGACACCAAGACGGACGACACCATCCCCAAGACACCACCTA	11	-	117965752-117965801	11qE2	PREDICTED: Mus musculus dynein, axonemal, heavy chain 17 (Dnahc17), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222054	ILMN_222054	IL18R1	NM_008365.1	NM_008365.1		16182	6680422	NM_008365.1	Il18r1	NP_032391.1	ILMN_1218525	007650242	S	2749	GACTTCGCTTTGTTCTTCTATCAGCCAAGCTTCGACACATGAAGTTTATT	1	+	40557597-40557646	1qB	Mus musculus interleukin 18 receptor 1 (Il18r1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]	Il18ralpha; Il1rrp	Il18ralpha; Il1rrp
Mus musculus	RefSeq	ILMN_192783	ILMN_192783	USP16	NM_024258.1	NM_024258.1		74112	13195675	NM_024258.1	Usp16	NP_077220.1	ILMN_2491301	001780563	S	2131	CAAGAAGCAGATGCTGGTCTCCCTCGCGCCTCCTGTCCTCACTCTGCATT	16	+	87481148-87481197	16qC3.3	Mus musculus ubiquitin specific peptidase 16 (Usp16), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	UBP-M; 2810483I07Rik; 1200004E02Rik; 6330514E22Rik	UBP-M; 2810483I07Rik; 1200004E02Rik; 6330514E22Rik
Mus musculus	RefSeq	ILMN_215402	ILMN_215402	MS4A3	NM_133246.4	NM_133246.4		170813	146149275	NM_133246.4	Ms4a3	NP_573509.1	ILMN_1250529	007200142	S	831	CCCCAAGCTTCAGAAGAGTGAGAACCTCATTTGAAAACTCAGCAGAACAT				19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 3 (Ms4a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HTm4; mHTm4	HTm4; mHTm4
Mus musculus	RefSeq	ILMN_215402	ILMN_215402	MS4A3	NM_133246.4	NM_133246.4		170813	146149275	NM_133246.4	Ms4a3	NP_573509.1	ILMN_2719732	000070068	S	327	CTAGCTCTCGGAATTTTTCTGGTTTGTTTACAACACGTGTCCCACCACTT				19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 3 (Ms4a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HTm4; mHTm4	HTm4; mHTm4
Mus musculus	RefSeq	ILMN_222567	ILMN_222567	BC017643	NM_144832.1	NM_144832.1		217370	21450218	NM_144832.1	BC017643	NP_659081.1	ILMN_1255776	000240487	S	1977	CAAAGGCCTTGAGGCCACTGTACCTAAGCCGAGCATGGTAGTTAGGCAAG	11	-	121084248-121084297	11qE2	Mus musculus cDNA sequence BC017643 (BC017643), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC37382; MGC37062; MGC28978	MGC37382; MGC37062; MGC28978
Mus musculus	RefSeq	ILMN_217282	ILMN_217282	OLFR1489	NM_146635.1	NM_146635.1		258628	33239129	NM_146635.1	Olfr1489	NP_666846.1	ILMN_2681417	001580037	S	622	ACTATATTGGTTATCGTGAACTCTTATGTACTTATTTTTGTTGCAATCTT	19	+	13708224-13708273	19qA	Mus musculus olfactory receptor 1489 (Olfr1489), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-19	MOR202-19
Mus musculus	RefSeq	ILMN_222650	ILMN_222650	ORAI3	NM_198424.3	NM_198424.3		269999	141802906	NM_198424.3	Orai3	NP_940816.1	ILMN_1260367	004640039	S	1345	GGAAGGTGACATGTCTGCACAACTGTCCTCAAGGCAATCAGCCCTTGCTT	7	+	134918013-134918062	7qF3	Mus musculus ORAI calcium release-activated calcium modulator 3 (Orai3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9930124N15; Orai3; BC061259	9930124N15; Orai3; BC061259
Mus musculus	RefSeq	ILMN_197841	ILMN_197841	LOC194209	XM_112616.2	XM_112616.2			38078819	XM_112616.2	LOC194209		ILMN_2529554	004890600	S	272	CTCCCCCACAGCCAGCAGCATCTTGGCTTCCTGTATTGTCTGCCTGCACT										
Mus musculus	RefSeq	ILMN_201242	ILMN_201242	LOC385041	XM_358011.1	XM_358011.1			38090099	XM_358011.1	LOC385041		ILMN_1243838	004060286	S	1	ATGCAGCTGGAGAAGAGGCTCCGAGAGCTGGAGGATAAGTACGCGGAGTG										
Mus musculus	RefSeq	ILMN_261526	ILMN_261526	APBB1IP	NM_019456.1	NM_019456.1		54519	34328064	NM_019456.1	Apbb1ip	NP_062329.1	ILMN_2967824	003450082	S	1847	CACCAGACTTCGTGCCACCACCCCCACCGCCTGCAGCTGTTGAAGACTCT	2	+	22730585-22730634	2qA3	Mus musculus amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein (Apbb1ip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		9930118P07Rik; Prp48	9930118P07Rik; Prp48
Mus musculus	RefSeq	ILMN_189030	ILMN_261526	APBB1IP	NM_019456.1	NM_019456.1		54519	34328064	NM_019456.1	Apbb1ip	NP_062329.1	ILMN_2755668	003400079	S	1995	GCAAGAGAACCAAGGACTCCCCGGTGCACCAGGGAACAGTGAGCAAGATT	2	+	22730733-22730782	2qA3	Mus musculus amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein (Apbb1ip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		9930118P07Rik; Prp48	9930118P07Rik; Prp48
Mus musculus	Riken	ILMN_207015	ILMN_207015	9030016H15RIK	ri|9030016H15|PX00651A18|AK078845|1769					AK078845	9030016H15Rik		ILMN_1237999	000130546	S	1709	GCAGCCAAGCATTCATCATCACCACCTCAAAGGGATAACATGCTGGATTC										
Mus musculus	RefSeq	ILMN_220903	ILMN_220903	AI467606	NM_178901.3	NM_178901.3		101602	142362663	NM_178901.3	AI467606	NP_849232.1	ILMN_1213645	000380670	S	1630	AGAAACGGAGTCCCGAATACCCGTGTGCCCACCAGCTGACAACTTCTTTA	7	+	134237275-134237324	7qF3	Mus musculus expressed sequence AI467606 (AI467606), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_194907	ILMN_257492	ATP6V1E1	NM_007510.2	NM_007510.2		11973	45504358	NM_007510.2	Atp6v1e1	NP_031536.2	ILMN_2663872	004610291	S	1074	GGGACTCACATTCCTCCAGGAACACTACCTTCGCTGTTACTGTTTAGGTC	6	-	120747954-120747982:120748857-120748877	6qF1	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit E1 (Atp6v1e1), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IMP]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	2410029D23Rik; Atp6v1e; Atp6e2; D6Ertd385e; Atp6e; P31; E2; Vma4	2410029D23Rik; Atp6v1e; Atp6e2; D6Ertd385e; Atp6e; P31; E2; Vma4
Mus musculus	MEEBO	ILMN_186106	ILMN_186106	SCL0001921.1_72	scl0001921.1_72	AK053736.1			26343682	AK053736.1	scl0001921.1_72		ILMN_2432681	002260475	S	19	GTTCTATCTTGATTTGACTTTGCTTCATAGGGCAACAGAGGAAACAGGCG										
Mus musculus	MEEBO	ILMN_222017	ILMN_222017	1810017N16RIK	scl35383.2.97_43	NM_175402.3			40254293	NM_175402.3	1810017N16Rik		ILMN_2743524	007650474	S	1681	TCCTACTTGAAACAGAAGCAGGCTGCAGGGGTGATCAGCTTGCCGGTGGG										
Mus musculus	RefSeq	ILMN_219003	ILMN_219003	OLFR545	NM_146840.1	NM_146840.1		258837	22203792	NM_146840.1	Olfr545	NP_667051.1	ILMN_1212762	000580634	S	618	TCGAACCTTTAATAGAGTCCTGGATATGCTCCTTCTAGGCACCTCCTACT	7	-	109642620-109642669	7qE3	Mus musculus olfactory receptor 545 (Olfr545), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR42-1; MGC129241	MOR42-1; MGC129241
Mus musculus	RefSeq	ILMN_211550	ILMN_211550	5430416O09RIK	NM_027789.2	NM_027789.2		71406	31541999	NM_027789.2	5430416O09Rik	NP_082065.1	ILMN_2906339	005360524	S	3715	CCCACATCATAAAGGGAGGTCAAGACGGGAACTCAGACAGGGCCGGGACT	4	+	43755263-43755312	4qB1	Mus musculus RIKEN cDNA 5430416O09 gene (5430416O09Rik), mRNA.				AI481365	AI481365
Mus musculus	RefSeq	ILMN_255908	ILMN_255908	OLFR835	NM_001012266.1	NM_001012266.1		257872	59676582	NM_001012266.1	Olfr835	NP_001012266.1	ILMN_3161869	006560274	S	812	CTTCAGTGGCCTGCATTATGTACACTGTAGTCCCACAAATGTTGAACCCA	9	+	18840380-18840429	9qA2	Mus musculus olfactory receptor 835 (Olfr835), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR150-3	MOR150-3
Mus musculus	RefSeq	ILMN_218113	ILMN_324608	6530404N21RIK	XM_001481327.1	XM_001481327.1		67795	149270753	XM_001481327.1	6530404N21Rik	XP_001481377.1	ILMN_2691781	000050133	S	1409	GCTACCACCCATAGTAAAGTGATAACTTCTTAGGCTATATTTCTTCCTCA				19qC1	PREDICTED: Mus musculus RIKEN cDNA 6530404N21 gene (6530404N21Rik), mRNA.					
Mus musculus	Riken	ILMN_207133	ILMN_207133	PCDHGC3	ri|F730003P08|PL00002J02|AK089310|3382					AK089310	Pcdhgc3		ILMN_2585283	002030408	S	3072	GGAGTTGTTTGGCTGTTTGAGGCTGTCCTGGAACTCACTATGTAGGCCAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220170	ILMN_220170	LASS4	NM_026058.3	NM_026058.3		67260	142366644	NM_026058.3	Lass4	NP_080334.2	ILMN_2718499	002600437	S	2709	CAGAGGGCCACTGATGAGAGAAACAGCTTCTAGAGAACTTGAGAGATGGA	8	+	4525219-4525268	8qA1.1	Mus musculus longevity assurance homolog 4 (S. cerevisiae) (Lass4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence IDA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]	Trh1; 2900019C14Rik	Trh1; 2900019C14Rik
Mus musculus	RefSeq	ILMN_259835	ILMN_259835	4631422O05RIK	NM_001040397.1	NM_001040397.1		78749	94536718	NM_001040397.1	4631422O05Rik	NP_001035487.1	ILMN_2817473	001050259	S	204	GAAGCAGCAATGCTGAGGGCTCAGCCCCAAAGCAAATCCCAAGACATAGC				16qC1.1	Mus musculus RIKEN cDNA 4631422O05 gene (4631422O05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219044	ILMN_219044	ATP4B	NM_009724.2	NM_009724.2		11945	133892578	NM_009724.2	Atp4b	NP_033854.1	ILMN_2703480	001170189	S	1172	ATCATTTGCCCGTCCTGCACTTCAATATGAACTATGGGTCCACATCAGGG	8	-	13386314-13386363	8qA1.1	Mus musculus ATPase, H+/K+ exchanging, beta polypeptide (Atp4b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The addition of a sugar unit to a protein amino acid in the endoplasmic reticulum [goid 33577] [evidence ISO]; Any process that modulates the frequency, rate or extent of proton transport into, out of, within or between cells [goid 10155] [evidence ISO]; Any process that reduces the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 45851] [evidence ISO]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) + K+(out) = ADP + phosphate + H+(out) + K+(in) [goid 8900] [evidence ISO]	AV080843	AV080843
Mus musculus	MEEBO	ILMN_210756	ILMN_210756	HOXA9	scl0001064.1_3	NM_010456.1			14149640	NM_010456.1	Hoxa9		ILMN_2645155	001500328	S	1944	AACATGTACCTCACACGGGACCGCAGGTACGAGGTGGCCCGGCTGCTCAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200618	ILMN_200618	LOC384406	XM_358741.1	XM_358741.1			38084305	XM_358741.1	LOC384406		ILMN_2539397	001940431	S	199	AGCTGTGTATTCATCAAAGACACTATGAAGACTGCTGACTCTAGCATTTC										
Mus musculus	RefSeq	ILMN_211509	ILMN_211509	2810455K09RIK	XM_138271.7	XM_138271.7		72805	149263529	XM_138271.7	2810455K09Rik	XP_138271.6	ILMN_2616542	003180338	S	2131	GCTGCCTGTGTTTCCAAGATTATGCCAGAACCAGTTCTTCATCCTGGGCC	12	+	112106869-112106918	12qF1	PREDICTED: Mus musculus RIKEN cDNA 2810455K09 gene (2810455K09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_240084	ILMN_240084	2610510H03RIK	NM_026620.3	NM_026620.3		68215	82546881	NM_026620.3	2610510H03Rik	NP_080896.2	ILMN_2871620	002360288	S	976	AACCACCACCCCCTGAAATGCCCCCTTGGCAGAAGAGACAAGAAGGCGGA	2	+	117096391-117096440	2qE5	Mus musculus RIKEN cDNA 2610510H03 gene (2610510H03Rik), mRNA.				RP23-73I19.1	RP23-73I19.1
Mus musculus	RefSeq	ILMN_194289	ILMN_240084	2610510H03RIK	NM_026620.3	NM_026620.3		68215	82546881	NM_026620.3	2610510H03Rik	NP_080896.2	ILMN_1252463	006280341	S	19	ACCAAGCGACCATGAGAGGGCCAGAGCTCGGGCCCGAAACCAGCATGGAA	2	+	117075493-117075503:117075504-117075542	2qE5	Mus musculus RIKEN cDNA 2610510H03 gene (2610510H03Rik), mRNA.				RP23-73I19.1	RP23-73I19.1
Mus musculus	MEEBO	ILMN_186413	ILMN_186413	CENTG2	scl17675.20_700				31342419	NM_178119	Centg2		ILMN_2435337	001660382	S	2	GAGACTGGGCCATAGAGCTGAGATGTAGAGTACCAATGTAGACCCTGGTG										
Mus musculus	RefSeq	ILMN_210253	ILMN_211503	CDK8	NM_153599.3	NM_153599.3		264064	110611229	NM_153599.3	Cdk8	NP_705827.2	ILMN_2726092	005560241	S	2215	ATACAAAAGCATGAGTGGCGACCTCCGTGAGGCACGGTGACCTCCTCGAG	5	+	147114079-147114128	5qG3	Mus musculus cyclin-dependent kinase 8 (Cdk8), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [evidence IEA]	MGC37111	MGC37111
Mus musculus	RefSeq	ILMN_211503	ILMN_211503	CDK8	NM_153599.3	NM_153599.3		264064	110611229	NM_153599.3	Cdk8	NP_705827.2	ILMN_1231367	006840133	S	640	GCGCGACATTATACCAAAGCAATTGATATTTGGGCTATAGGGTGTATATT	5	+	147097791-147097815:147104200-147104224	5qG3	Mus musculus cyclin-dependent kinase 8 (Cdk8), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [evidence IEA]	MGC37111	MGC37111
Mus musculus	RefSeq	ILMN_211503	ILMN_211503	CDK8	NM_153599.3	NM_153599.3		264064	110611229	NM_153599.3	Cdk8	NP_705827.2	ILMN_2616495	004890228	S	678	AGGGTGTATATTTGCAGAACTACTAACGTCAGAACCAATATTTCACTGTC	5	+	147104213-147104262	5qG3	Mus musculus cyclin-dependent kinase 8 (Cdk8), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [evidence IEA]	MGC37111	MGC37111
Mus musculus	RefSeq	ILMN_194559	ILMN_313458	LOC673430	XR_032152.1	XR_032152.1		673430	149253469	XR_032152.1	LOC673430		ILMN_2507518	004610554	S	536	AATAAAAATCTTGATGAGGTTTTGGTTTCTAGACAAAACAATAGTGAAAT	4|NT_166290.1	+	9505-9554		PREDICTED: Mus musculus similar to crooked legs CG14938-PB (LOC673430), misc RNA.					
Mus musculus	Riken	ILMN_201993	ILMN_201993	2310045L10RIK	ri|2310045L10|ZX00040M13|AK009826|1828					AK009826	2310045L10Rik		ILMN_1212639	003180291	S	1022	AGTAGCAGCAAACCAGAGGCTGCCACCCTTGCCAAGCAGTCATCCAGTGC										
Mus musculus	RefSeq	ILMN_213316	ILMN_213316	PSMD11	NM_178616.3	NM_178616.3		69077	134053904	NM_178616.3	Psmd11	NP_848731.2	ILMN_1214057	000650446	S	1214	CGATGAACCCCCAGTAGATAAAACTTATGAAGCTGCTCTGGAAACTATTC	11	+	80284991-80285040	11qB5	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 (Psmd11), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			S9; C78232; 1810019E17Rik; 1700089D09Rik; 2610024G20Rik; 2810055C24Rik; P44.5	S9; C78232; 1810019E17Rik; 1700089D09Rik; 2610024G20Rik; 2810055C24Rik; P44.5
Mus musculus	RefSeq	ILMN_221398	ILMN_221398	CML3	NM_053097.1	NM_053097.1		93674	16716390	NM_053097.1	Cml3	NP_444327.1	ILMN_2735046	006940753	S	691	CATTGCAGCACCGAAGAGAAGGCCTAGGGAAAGCTATGGTCAGGACTGTC	6	-	85711275-85711324	6qC3	Mus musculus camello-like 3 (Cml3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISA]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence NAS]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [evidence ISA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence NAS]	4930583K21Rik; 4833414A14Rik	4930583K21Rik; 4833414A14Rik
Mus musculus	RefSeq	ILMN_221800	ILMN_221800	PPCS	NM_026494.3	NM_026494.3		106564	118129845	NM_026494.3	Ppcs	NP_080770.2	ILMN_2740494	002940706	S	694	GGTGCCAAAGATGCTTTCCCCTCTGGTCAAAGACTGGGCTCCTAAAGCGT	4	-	119091834-119091883	4qD2.1	Mus musculus phosphopantothenoylcysteine synthetase (Ppcs), mRNA.			Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: CTP + (R)-4'-phosphopantothenate + L-cysteine = CMP + diphosphate + (R)-4'-phosphopantothenoyl-L-cysteine. Cysteine can be replaced by some of its derivatives [goid 4632] [evidence IEA]	6330579B17Rik; AI413471; AI790434; RP23-390M8.3	6330579B17Rik; AI413471; AI790434; RP23-390M8.3
Mus musculus	MEEBO	ILMN_186504	ILMN_186504	IGHV1S12_J00507_IG_HEAVY_VARIABLE_1S12_239	IGHV1S12_J00507_Ig_heavy_variable_1S12_239						IGHV1S12_J00507_Ig_heavy_variable_1S12_239		ILMN_1215950	001710243	S	19	GGTAGTACTAATTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGC										
Mus musculus	RefSeq	ILMN_191104	ILMN_191104	BRWD2	NM_172255.2	NM_172255.2		207425	142368235	NM_172255.2	Brwd2	NP_758459.1	ILMN_2476131	007510019	S	3883	GCCCATACACTAGGAGCCAGTTCTGTGTCCCAGGTGACCTCAAAATGGGG	7	+	136778651-136778700	7qF3	Mus musculus bromodomain and WD repeat domain containing 2 (Brwd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1351; AW489876; 2900055P10Rik; MGC47139; Wdr11	mKIAA1351; AW489876; 2900055P10Rik; MGC47139; Wdr11
Mus musculus	RefSeq	ILMN_216234	ILMN_216234	IMMP2L	NM_053122.3	NM_053122.3		93757	140969542	NM_053122.3	Immp2l	NP_444352.2	ILMN_1242333	007210129	S	470	CCCCCGCGGTCACATGTGGGTTGAAGGCGATCATCATGGACACAGTTTTG	12	+	43056268-43056317	12qB1	Mus musculus IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) (Immp2l), nuclear gene encoding mitochondrial protein, mRNA.	Protease complex of the mitochondrial inner membrane, consisting of at least two subunits, involved in processing of both nuclear- and mitochondrially-encoded proteins targeted to the intermembrane space [goid 42720] [evidence IGI]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence ISA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISA]; The cleavage of proteins, usually near the N terminus, during the process of import into the mitochondrion; several different peptidases mediate cleavage of proteins destined for different mitochondrial compartments [goid 6627] [evidence IGI]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IGI]	AI853880; IMP2	AI853880; IMP2
Mus musculus	RefSeq	ILMN_195824	ILMN_219266	2610318N02RIK	NM_183287.2	NM_183287.2		70458	71274187	NM_183287.2	2610318N02Rik	NP_899110.2	ILMN_1252483	005050754	S	176	GAAGCTGTCTGAAGAATCAAAACAAAACTAGGAACTCCAGGACCTTGTGG	16	-	17123639-17123688	16qA3	Mus musculus RIKEN cDNA 2610318N02 gene (2610318N02Rik), mRNA.				AL033325	AL033325
Mus musculus	RefSeq	ILMN_219266	ILMN_219266	2610318N02RIK	NM_183287.2	NM_183287.2		70458	71274187	NM_183287.2	2610318N02Rik	NP_899110.2	ILMN_1216407	006330376	S	7	ACGAGGTGCTGAGGTGCGGGGTTGTCCAGATATGACGGGGCCGCCGCCTA	16	-	17125143-17125192	16qA3	Mus musculus RIKEN cDNA 2610318N02 gene (2610318N02Rik), mRNA.				AL033325	AL033325
Mus musculus	Riken	ILMN_203596	ILMN_203596	HS6ST2	ri|6030470D11|PX00058O02|AK031649|3805					AK031649	Hs6st2		ILMN_1227701	002710039	S	3715	TGTCTGGCTAAAGGGAATGACTGAGGGAAGGGAGGGAGCTAGATACTGAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	MEEBO	ILMN_187647	ILMN_187647	2900083I11RIK	scl073059.1_58						2900083I11Rik		ILMN_1257190	002760326	S	1	TTCGATGAGGACGACGGCCCGGTGGATTGCGACTGCCCGGTCTCCTGCTA										
Mus musculus	MEEBO	ILMN_212453	ILMN_212453	MDN1	scl0230050.4_121	NM_177666.2			31343595	NM_177666.2	Mdn1		ILMN_2626621	007570477	S	1985	ATAAATGAATGTTAGAAAATAATGATAGTGTAGTTAAGTAGGAAAATACT								Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	Riken	ILMN_204660	ILMN_204660	9430025L01RIK	ri|9430025L01|PX00108B08|AK034694|2060					AK034694	9430025L01Rik		ILMN_1255751	005690133	S	520	TGAGCTACTCCGCTTGGCTACAGTCATGCTTTCTCAAAAGTGACTGGGGA										
Mus musculus	RefSeq	ILMN_200929	ILMN_200929	LOC385476	XM_358249.1	XM_358249.1			38087120	XM_358249.1	LOC385476		ILMN_1251978	005220193	S	342	CACCCCCCAAAGGGGAGACCAAAAAGAATACCGCCCCAAAATCAAAGGCG										
Mus musculus	Riken	ILMN_205425	ILMN_205425	E330015C15RIK	ri|E330015C15|PX00211F14|AK054324|2742					AK054324	E330015C15Rik		ILMN_1235682	002450326	S	2474	TAGAAAGAAAGTAGGAGCAAATGGGAGGAGAGGGGGGGGGCACAGACGTG										
Mus musculus	RefSeq	ILMN_236365	ILMN_236365	GM1141	NM_001033470.1	NM_001033470.1		382221	85701990	NM_001033470.1	Gm1141	NP_001028642.1	ILMN_2983324	003460066	S	1943	CAAAGCTGTACAATGCACGGGGGGAAAAGCGGTTCTATCATGCCCTTCCC	X	+	68193386-68193435	XqA7.3	Mus musculus gene model 1141, (NCBI) (Gm1141), mRNA.					
Mus musculus	Riken	ILMN_206321	ILMN_206321	D330016N23RIK	ri|D330016N23|PX00191B17|AK084579|1793					AK084579	D330016N23Rik		ILMN_1250712	001260148	S	1612	GTGAGAAGCACTGAACTTCCTCTGGGCAGGAGTTGAACCACATCCCCTCC										
Mus musculus	RefSeq	ILMN_219372	ILMN_219372	AIRE	NM_009646.1	NM_009646.1		11634	6753019	NM_009646.1	Aire	NP_033776.1	ILMN_2895658	006660367	S	1562	CCAAGGTAGGGGACGACTCTGCTAGTCACGACCCTGTTCTACATAGGGAC	10	-	77499850-77499880:77500262-77500280	10qC1	Mus musculus autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy) (Aire), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; An immune response mediated through a body fluid [goid 6959] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [evidence IEA]	MGC123375; MGC123374	MGC123375; MGC123374
Mus musculus	RefSeq	ILMN_219372	ILMN_219372	AIRE	NM_009646.1	NM_009646.1		11634	6753019	NM_009646.1	Aire	NP_033776.1	ILMN_2707921	005670315	S	1859	GCAGATGGCCCTGATCTTTGTAGAGATGCAAGGCCACCCCATATCCTGGA	10	-	77498540-77498578:77499245-77499255	10qC1	Mus musculus autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy) (Aire), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; An immune response mediated through a body fluid [goid 6959] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [evidence IEA]	MGC123375; MGC123374	MGC123375; MGC123374
Mus musculus	RefSeq	ILMN_219372	ILMN_219372	AIRE	NM_009646.1	NM_009646.1		11634	6753019	NM_009646.1	Aire	NP_033776.1	ILMN_1213787	007000553	S	869	ATGAGCAGAAAGTGGGCCAGCAGTGTGGGGTTCCTCCCCTTCCATCCCTC	10	-	77502430-77502479	10qC1	Mus musculus autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy) (Aire), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; An immune response mediated through a body fluid [goid 6959] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [evidence IEA]	MGC123375; MGC123374	MGC123375; MGC123374
Mus musculus	RefSeq	ILMN_216358	ILMN_216358	STAT5A	NM_011488.2	NM_011488.2		20850	31981473	NM_011488.2	Stat5a	NP_035618.1	ILMN_2976191	004050619	S	3396	GTGCTAGGATTACAGGCATGCATGACCACACGTGGCCTCATCCTTTCTTC	11	+	100740669-100740685:100740602-100740634	11qD	Mus musculus signal transducer and activator of transcription 5A (Stat5a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IGI]; The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48541] [evidence IGI]; The process whose specific outcome is the progression of the secondary male sexual characteristics over time, from their formation to the mature structures. In male humans, these include growth of axillary, chest, and pubic hair, voice changes, and testicular/penile enlargement. Development occurs in response to sex hormone secretion [goid 46544] [evidence IGI]; The process whose specific outcome is the progression of the secondary male sexual characteristics over time, from their formation to the mature structures. In male humans, these include growth of axillary, chest, and pubic hair, voice changes, and testicular/penile enlargement. Development occurs in response to sex hormone secretion [goid 46544] [evidence IMP]; Any process that modulates the frequency, rate or extent of epithelial cell differentiation [goid 30856] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [evidence IGI]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IGI]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids [goid 19218] [evidence IGI]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IGI]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence IDA]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence IGI]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation [goid 1553] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte differentiation [goid 45647] [evidence IGI]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the secondary female sexual characteristics over time, from their formation to the mature structures. In female humans, these include growth of axillary and pubic hair, breast development and menstrual periods. Their development occurs in response to sex hormone secretion [goid 46543] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation [goid 45588] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of lymphocyte differentiation [goid 45621] [evidence IGI]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	STAT5; AA959963	STAT5; AA959963
Mus musculus	RefSeq	ILMN_216358	ILMN_216358	STAT5A	NM_011488.2	NM_011488.2		20850	31981473	NM_011488.2	Stat5a	NP_035618.1	ILMN_2976188	007650575	S	3497	GGGTCTGGGAGGAGGAAACCTGGGGCGAAAAACCTGTAGCACACAAAACC	11	+	100740686-100740694:100740925-100740965	11qD	Mus musculus signal transducer and activator of transcription 5A (Stat5a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IGI]; The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes [goid 48541] [evidence IGI]; The process whose specific outcome is the progression of the secondary male sexual characteristics over time, from their formation to the mature structures. In male humans, these include growth of axillary, chest, and pubic hair, voice changes, and testicular/penile enlargement. Development occurs in response to sex hormone secretion [goid 46544] [evidence IGI]; The process whose specific outcome is the progression of the secondary male sexual characteristics over time, from their formation to the mature structures. In male humans, these include growth of axillary, chest, and pubic hair, voice changes, and testicular/penile enlargement. Development occurs in response to sex hormone secretion [goid 46544] [evidence IMP]; Any process that modulates the frequency, rate or extent of epithelial cell differentiation [goid 30856] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [evidence IGI]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IGI]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids [goid 19218] [evidence IGI]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IGI]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IDA]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence IDA]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence IGI]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]; The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation [goid 1553] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte differentiation [goid 45647] [evidence IGI]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the secondary female sexual characteristics over time, from their formation to the mature structures. In female humans, these include growth of axillary and pubic hair, breast development and menstrual periods. Their development occurs in response to sex hormone secretion [goid 46543] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation [goid 45588] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of lymphocyte differentiation [goid 45621] [evidence IGI]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	STAT5; AA959963	STAT5; AA959963
Mus musculus	RefSeq	ILMN_214563	ILMN_214563	MTBP	NM_134092.2	NM_134092.2		105837	31982579	NM_134092.2	Mtbp	NP_598853.2	ILMN_2684261	001980079	S	2738	GAGCTTCACGGCCTGCAGCCAGAGACTCTTCGACATCTCCAAGTTCTACC	15	+	55452237-55452286	15qD1	Mus musculus Mdm2, transformed 3T3 cell double minute p53 binding protein (Mtbp), mRNA.		The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MDM2BP; AI429604	MDM2BP; AI429604
Mus musculus	RefSeq	ILMN_214563	ILMN_214563	MTBP	NM_134092.2	NM_134092.2		105837	31982579	NM_134092.2	Mtbp	NP_598853.2	ILMN_2684260	000670377	S	2731	CCATGAGAGCTTCACGGCCTGCAGCCAGAGACTCTTCGACATCTCCAAGT	15	+	55452230-55452279	15qD1	Mus musculus Mdm2, transformed 3T3 cell double minute p53 binding protein (Mtbp), mRNA.		The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MDM2BP; AI429604	MDM2BP; AI429604
Mus musculus	RefSeq	ILMN_214563	ILMN_214563	MTBP	NM_134092.2	NM_134092.2		105837	31982579	NM_134092.2	Mtbp	NP_598853.2	ILMN_1224894	004220482	S	1714	GGGAGCGCTTCCTAGGTCACTTTGATGTTCTCCCCACTGAAGCAGCTTTA	15	+	55428969-55429018	15qD1	Mus musculus Mdm2, transformed 3T3 cell double minute p53 binding protein (Mtbp), mRNA.		The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MDM2BP; AI429604	MDM2BP; AI429604
Mus musculus	MEEBO	ILMN_191815	ILMN_191815	1700084C06RIK	scl37232.2.1_22						1700084C06Rik		ILMN_2482446	006960487	S	4	CTCCCTCAGGCTGGCTTACAGGCTTCCTGCCTGCTAGGGCAGGAATCACT										
Mus musculus	RefSeq	ILMN_235195	ILMN_235195	LRRC52	NM_001013382.1	NM_001013382.1		240899	61656189	NM_001013382.1	Lrrc52	NP_001013400.1	ILMN_2909808	000650228	S	793	CAGGACTACATCTTCTTACTGCTCATCGGCTTCTGCATCTTCGCTGCCGG	1	-	169282644-169282693	1qH2.3	Mus musculus leucine rich repeat containing 52 (Lrrc52), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4930413P14Rik	4930413P14Rik
Mus musculus	RefSeq	ILMN_193200	ILMN_236568	6530404N21RIK	XR_001612.1	XR_001612.1		67795	94406194	XR_001612.1	6530404N21Rik		ILMN_2494939	000450564	S	184	GGAATATTCTGTAAAGTAGAATCTGTCACTACCATGGCCCTGGCATCAAC				19qC1	PREDICTED: Mus musculus RIKEN cDNA 6530404N21 gene (6530404N21Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_246728	ILMN_246728	ZFP37	NM_009554.3	NM_009554.3		22696	123701553	NM_009554.3	Zfp37	NP_033580.3	ILMN_2809334	002000307	S	3238	TAATGGTGGCTTCCACTGAACACAAGAGTGCAGCATTGAGGTCTGACATG	4	-	61851300-61851349	4qB3	Mus musculus zinc finger protein 37 (Zfp37), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence TAS]	Tzn; Zfp-37; AV042165	Tzn; Zfp-37; AV042165
Mus musculus	MEEBO	ILMN_191533	ILMN_191533	9430081H08RIK	scl35955.1.154_0						9430081H08Rik		ILMN_1241720	000150270	S	11	CCGTGTTTGTGACGGATTGGCTTTAACTCTGAACCCCAATAGTACGAGAG										
Mus musculus	RefSeq	ILMN_212053	ILMN_212053	MYH11	NM_013607.1	NM_013607.1		17880	7305294	NM_013607.1	Myh11	NP_038635.1	ILMN_2622217	000510288	S	6133	CACTTGTGTCCATTCGTTCTCAAGTCACAGAAATCACTCCACCCCTCACC	16	-	14195024-14195073	16qA1	Mus musculus myosin, heavy polypeptide 11, smooth muscle (Myh11), mRNA.	A filament of myosin found in a muscle cell of any type [goid 5859] [evidence IDA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; A filament of myosin found in a muscle cell of any type [goid 5859] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]; The contractile fiber of smooth muscle cells [goid 30485] [evidence IDA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IDA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IMP]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SM1; smMHC; SM2; AV071570	SM1; smMHC; SM2; AV071570
Mus musculus	RefSeq	ILMN_207456	ILMN_207456	PBX1	NM_183355.1	NM_183355.1		18514	34365778	NM_183355.1	Pbx1	NP_899198.1	ILMN_3137804	001470315	A	266	GACAGCTTGAAGGATAAAAAGCCTCGGTGCTTCCCAGGCGCCGATCCGAG	1	-	170268215-170268264	1qH2.3	Mus musculus pre B-cell leukemia transcription factor 1 (Pbx1), transcript variant a, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	D230003C07Rik; Pbx-1	D230003C07Rik; Pbx-1
Mus musculus	RefSeq	ILMN_207456	ILMN_207456	PBX1	NM_183355.1	NM_183355.1		18514	34365778	NM_183355.1	Pbx1	NP_899198.1	ILMN_3060369	004860563	I	1356	TCTTCCAGTTCTTTTAACATGTCAAACTCTGGAGATTTGTTCATGAGCGT	1	-	170021686-170021735	1qH2.3	Mus musculus pre B-cell leukemia transcription factor 1 (Pbx1), transcript variant a, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	D230003C07Rik; Pbx-1	D230003C07Rik; Pbx-1
Mus musculus	Riken	ILMN_207417	ILMN_207417	DOCK2	ri|F630047G04|PL00015K15|AK089228|3728					AK089228	Dock2		ILMN_1259359	001580551	S	3295	TCCTCCCTTGGTTCCAAATCAAAGCCCATGCTGGACTCAGGAGCCCTCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IMP]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; The expansion of an alpha-beta T cell population by cell division [goid 46633] [evidence IMP]; The change in morphology and behavior of an alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 46631] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction [goid 35022] [evidence IC ]; The clustering and aggregation of membrane rafts at a single cellular pole during activation of particular cell types, such as lymphocytes [goid 1766] [evidence IMP]; The formation of an area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and target cell, which facilitates activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1771] [evidence IMP]; The directed orientation of T cell signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with antigen presenting cell [goid 1768] [evidence IMP]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence IMP]		
Mus musculus	MEEBO	ILMN_184257	ILMN_184257	BC037594	scl0230344.1_198				52138539	NM_177863	BC037594		ILMN_2641257	006940164	S	3469	CCTTCAGGGTCTCTGGGTGTGGATGAGTCTTTGGCACTATGAAGACTGTA										
Mus musculus	MEEBO	ILMN_184257	ILMN_184257	BC037594	scl0230344.1_198				52138539	NM_177863	BC037594		ILMN_1221613	000630014	S	12	CCCTTTTCTCCACACCACGTGTACTTCTTGGCCAGCAGGAATTTCCACTC										
Mus musculus	MEEBO	ILMN_186918	ILMN_186918	GTF2H2	scl43595.21.1_7				31981224	NM_022011	Gtf2h2		ILMN_1242007	001410634	S	9	CAGCTAGCTGAAAACAAACTGCTGAACTAAAGAAGTTTTCTCCTTAGTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214315	ILMN_214315	2310035K24RIK	NM_027129.2	NM_027129.2		69596	31980818	NM_027129.2	2310035K24Rik	NP_081405.2	ILMN_2646771	000940577	S	1273	AGTGCAGAGCAGGGGGATTCTGCGGTTCCTTATGTGCCATGCCCCCGTGT	2	+	131039091-131039140	2qF1	Mus musculus RIKEN cDNA 2310035K24 gene (2310035K24Rik), mRNA.				AW060727; RP23-387C21.2; 0610038L13Rik	AW060727; RP23-387C21.2; 0610038L13Rik
Mus musculus	RefSeq	ILMN_211430	ILMN_211430	NGB	NM_022414.2	NM_022414.2		64242	31543322	NM_022414.2	Ngb	NP_071859.1	ILMN_2895873	000060113	S	1234	GCTCTTGGTTCAGCATTTCTGGTGGAAGCACCCCGGTATTCTTTTGGGGG	12	-	88438813-88438862	12qD2	Mus musculus neuroglobin (Ngb), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211430	ILMN_211430	NGB	NM_022414.2	NM_022414.2		64242	31543322	NM_022414.2	Ngb	NP_071859.1	ILMN_2615821	003710053	S	955	GCCCCAGGAGGCAGAACAATTTGGGTAGTGAGGTGGCATGGGGGTTCTTC	12	-	88439092-88439141	12qD2	Mus musculus neuroglobin (Ngb), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]		
Mus musculus	RefSeq	ILMN_230849	ILMN_230849	DUSP22	NM_001037955.3	NM_001037955.3		105352	146198766	NM_001037955.3	Dusp22	NP_001033044.1	ILMN_3162564	004640368	I	2064	TGAAGCTTAAGAAACCCCCAAGAAGCCCCCGAGGAGCTGGACAGTGGTGG				13qA3.2	Mus musculus dual specificity phosphatase 22 (Dusp22), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence ISO]	AW212235; MKPX; JSP1; JKAP; MGC118031; 1110028K04Rik; RP23-217J3.1	AW212235; MKPX; JSP1; JKAP; MGC118031; 1110028K04Rik; RP23-217J3.1
Mus musculus	RefSeq	ILMN_191398	ILMN_233458	NFIA	NM_010905.2	NM_010905.2		18027	142378539	NM_010905.2	Nfia	NP_035035.1	ILMN_1232915	000540056	S	2492	CTGTTTTGACAGAAACTGACAGGAATCAAAACAATCGAATTTTGAATTGA	4	+	97778819-97778868	4qC6	Mus musculus nuclear factor I/A (Nfia), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	NF1-A; 1110047K16Rik; 9430022M17Rik	NF1-A; 1110047K16Rik; 9430022M17Rik
Mus musculus	Riken	ILMN_206709	ILMN_206709	COPG1	ri|E530016G08|PX00319A20|AK089147|1117					AK089147	Copg1		ILMN_2582122	004670630	S	763	TCCTGCCTCAGTCATTTTGGCTCAGGAATGGCCGTCTCTACTTTGGTCCT										
Mus musculus	RefSeq	ILMN_209584	ILMN_209584	ALOXE3	NM_011786.1	NM_011786.1		23801	6753041	NM_011786.1	Aloxe3	NP_035916.1	ILMN_1248005	000830553	S	2245	TCTCAGTTTGGACCTTCTCCTCTGCCCATGGGACCACGATGGCCTTGACA	11	+	68962324-68962373	11qB3	Mus musculus arachidonate lipoxygenase 3 (Aloxe3), mRNA.		The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence ISA]	e-LOX-3; MGC143830; MGC143829	e-LOX-3; MGC143830; MGC143829
Mus musculus	RefSeq	ILMN_209838	ILMN_209838	H2-AB1	NM_207105.1	NM_207105.1		14961	46358077	NM_207105.1	H2-Ab1	NP_996988.1	ILMN_2913716	005860435	S	732	CTGAGTCTGCCTGGAGCAAAATGTTGAGCGGCATCGGGGGCTGCGTGCTT	17	+	33876128-33876177	17qB1	Mus musculus histocompatibility 2, class II antigen A, beta 1 (H2-Ab1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; The process by which an antigen-presenting cell expresses peptide antigen in association with an MHC protein complex on its cell surface, including proteolysis and transport steps for the peptide antigen both prior to and following assembly with the MHC protein complex. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein [goid 48002] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IDA]	Rmcs1; I-A<b>; H2-Ab; AI845868; I-Abeta; IAb; Ia-2; Ia2; H-2Ab; Abeta	Rmcs1; I-A<b>; H2-Ab; AI845868; I-Abeta; IAb; Ia-2; Ia2; H-2Ab; Abeta
Mus musculus	RefSeq	ILMN_208772	ILMN_208772	PTX3	NM_008987.3	NM_008987.3		19288	113930725	NM_008987.3	Ptx3	NP_033013.3	ILMN_2662803	005390136	S	1526	GGTGCTTTCAGATTAATGTCTGCCTCTGTCAGATAAACCCTCAGATAACT	3	+	66029332-66029381	3qE1	Mus musculus pentraxin related gene (Ptx3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process by which a microorganism (or other particulate material) is rendered more susceptible to phagocytosis by coating with an opsonin, a blood serum protein such as a complement component or antibody [goid 8228] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species [goid 1878] [evidence IMP]	Interacting selectively with zymosan [goid 1872] [evidence IMP]	AI607804; TSG-14	AI607804; TSG-14
Mus musculus	MEEBO	ILMN_211995	ILMN_211995	LHX4	scl16116.8.3_1				7110668	NM_010712	Lhx4		ILMN_2770659	004120113	S	1521	CCCCCCAGAATAATAAAATAGTTTCTGGACCACCTTGATTACACACTAAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of medial motor column neurons. Medial motor column neurons are generated at all rostrocaudal levels and send axons to the axial muscles (medial group) and to the body wall muscles (lateral group). Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21526] [evidence IGI]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IGI]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212972	ILMN_212972	CREBL2	NM_177687.3	NM_177687.3		232430	142367492	NM_177687.3	Crebl2	NP_808355.1	ILMN_2632162	003870768	S	2425	ATGTAGTGTTCTGACTGGGATGGCGTGTTCTGCCAGTGGGGCGACTCAGT	6	+	134807790-134807839	6qG1	Mus musculus cAMP responsive element binding protein-like 2 (Crebl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC130381; AI046348; MGC130380; B230205M03	MGC130381; AI046348; MGC130380; B230205M03
Mus musculus	RefSeq	ILMN_195108	ILMN_195108	WNT4	NM_009523.1	NM_009523.1		22417	6678594	NM_009523.1	Wnt4	NP_033549.1	ILMN_2889641	001770324	S	659	AGTGCAAGTGTCACGGGGTGTCGGGCTCCTGCGAGGTAAAGACGTGCTGG	4	+	136852252-136852301	4qD3	Mus musculus wingless-related MMTV integration site 4 (Wnt4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IDA]; The process by which the anatomical structures of a tube are generated and organized. Morphogenesis pertains to the creation of form. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system [goid 35239] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IDA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IMP]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IGI]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 48599] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40037] [evidence IGI]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Wnt-4; MGC123964	Wnt-4; MGC123964
Mus musculus	RefSeq	ILMN_195108	ILMN_195108	WNT4	NM_009523.1	NM_009523.1		22417	6678594	NM_009523.1	Wnt4	NP_033549.1	ILMN_2512663	005260482	S	512	CGGACAACATCGCCTATGGCGTAGCCTTCTCACAGTCCTTTGTGGACGTC	4	+	136851596-136851645	4qD3	Mus musculus wingless-related MMTV integration site 4 (Wnt4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IDA]; The process by which the anatomical structures of a tube are generated and organized. Morphogenesis pertains to the creation of form. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system [goid 35239] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IDA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IMP]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IGI]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 48599] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40037] [evidence IGI]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Wnt-4; MGC123964	Wnt-4; MGC123964
Mus musculus	RefSeq	ILMN_191711	ILMN_238855	FAM129A	NM_022018.2	NM_022018.2		63913	118130415	NM_022018.2	Fam129a	NP_071301.1	ILMN_2591031	005310431	S	3133	TTGAAGGCATTCTAATCAAGCACGTGAAGGACTCCAGCCACACCACCCAC	1	+	153565832-153565881	1qG2	Mus musculus family with sequence similarity 129, member A (Fam129a), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI256368	AI256368
Mus musculus	RefSeq	ILMN_192573	ILMN_240291	PPAP2C	NM_015817.2	NM_015817.2		50784	110431340	NM_015817.2	Ppap2c	NP_056632.2	ILMN_1249666	004560670	S	1545	GGAAGTAGGTCCCGGATCTGCCATTCCCATCTGTTTCAAAACACTTCAAG	10	-	78989225-78989274	10qC1	Mus musculus phosphatidic acid phosphatase type 2c (Ppap2c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence ISS]	Lpp2	Lpp2
Mus musculus	RefSeq	ILMN_240291	ILMN_240291	PPAP2C	NM_015817.2	NM_015817.2		50784	110431340	NM_015817.2	Ppap2c	NP_056632.2	ILMN_3003631	006590450	S	1172	TGCTCTGAGGGCTGTCTCCCATCTCCAGTGGGTTTTCAAGGAGGGCCATC	10	-	78989598-78989647	10qC1	Mus musculus phosphatidic acid phosphatase type 2c (Ppap2c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence ISS]	Lpp2	Lpp2
Mus musculus	RefSeq	ILMN_195368	ILMN_225013	PHF3	NM_001081080.1	NM_001081080.1		213109	124487308	NM_001081080.1	Phf3	NP_001074549.1	ILMN_1245302	006900204	S	6574	ACGACCCCAGGGAGGTCATGGGTTGCTTTAATCTGTGCTCATTGAAGGCG	1	-	30860124-30860173	1qA5	Mus musculus PHD finger protein 3 (Phf3), mRNA.			Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	KIAA0244; mKIAA0244; AI315311; 2310061N19Rik	KIAA0244; mKIAA0244; AI315311; 2310061N19Rik
Mus musculus	RefSeq	ILMN_237360	ILMN_237360	GM603	NM_001033338.1	NM_001033338.1		239731	85701827	NM_001033338.1	Gm603	NP_001028510.1	ILMN_2934163	003290360	S	4626	TCACACAGTATCCCTCCTCCCTAGCCACCGTAAGCAACACTGGCTCCAGG	16	+	17127173-17127222	16qA3	Mus musculus gene model 603, (NCBI) (Gm603), mRNA.				Gm1759; mKIAA1666	Gm1759; mKIAA1666
Mus musculus	RefSeq	ILMN_209936	ILMN_209936	4933405O20RIK	NM_172901.2	NM_172901.2		243996	142350709	NM_172901.2	4933405O20Rik	NP_766489.1	ILMN_1229724	007210746	S	1203	CTTCCTGCAGTTCACTTGATTCACCCCCTCAGAGAGTCCAGCTAGCTTAC	7	+	57855762-57855780:57855781-57855811	7qB5	Mus musculus RIKEN cDNA 4933405O20 gene (4933405O20Rik), mRNA.			Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH + H+ [goid 4449] [evidence IEA]	AV046776	AV046776
Mus musculus	Riken	ILMN_202619	ILMN_202619	9530019N15RIK	ri|9530019N15|PX00111P15|AK020564|751					AK020564	9530019N15Rik		ILMN_1256696	000150379	S	400	ACTAAGTTCAGCCTGAGTGGTTCGGGTGCTTGGCTAGGGTGGTAGGGCAG										
Mus musculus	RefSeq	ILMN_235587	ILMN_235587	AEBP2	NM_001005605.1	NM_001005605.1		11569	54112426	NM_001005605.1	Aebp2	NP_001005605.1	ILMN_3015437	001580753	I	418	AGCAGCGGCGATGGGGACGGGAAGGAGGGCCTGGAGGAGCCCAAGGGACC	6	+	140572627-140572676	6qG2	Mus musculus AE binding protein 2 (Aebp2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IMP]	B230313N05Rik	B230313N05Rik
Mus musculus	RefSeq	ILMN_217083	ILMN_217083	MPPE1	NM_172630.1	NM_172630.1		225651	27369901	NM_172630.1	Mppe1	NP_766218.1	ILMN_2812244	007550239	S	1624	AGGAACCGAAACAACCCAAGTTTCATCATGGGCAGCCTGACATCCAGAGA	18	-	67351232-67351253:67352152-67352179	18qE1	Mus musculus metallophosphoesterase 1 (Mppe1), mRNA. XM_001001219	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	A530095G11	A530095G11
Mus musculus	RefSeq	ILMN_215118	ILMN_215118	CAMTA2	NM_178116.3	NM_178116.3		216874	118130545	NM_178116.3	Camta2	NP_835217.1	ILMN_1220834	004760129	S	4394	CCCCCGGCTGGCTCCACGAGCACTTTCTACTTGTGCATGGGCTTGGTTTA	11	-	70489097-70489146	11qB3	Mus musculus calmodulin binding transcription activator 2 (Camta2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA0909; RP23-326P7.7; Kiaa0909-hp	mKIAA0909; RP23-326P7.7; Kiaa0909-hp
Mus musculus	MEEBO	ILMN_213877	ILMN_213877	DSCAML1	scl074656.8_30	NM_029039.2			28077034	NM_029039.2	Dscaml1		ILMN_1255425	001400180	S	1306	GAAGGGAGCCCCAGCCCACCGATAGCTACAAGCTCTATCCTGGCATTCCT						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence ISA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISA]			
Mus musculus	MEEBO	ILMN_222593	ILMN_222593	1500001A10RIK	scl0068955.1_148	NM_026886.1			30794433	NM_026886.1	1500001A10Rik		ILMN_2775213	003710201	S	3691	TGATGCCACCATGAGAGGCCGGATAGCAGGTGTCTGGCACAGGAGTAGGC										
Mus musculus	RefSeq	ILMN_223148	ILMN_223148	CCDC122	NM_175369.3	NM_175369.3		108811	142365913	NM_175369.3	Ccdc122	NP_780578.1	ILMN_2759932	006200184	S	1352	AATGCTTGTTTATAACTGTTGAATTCACTATCTTACAAATTAAAAATTTG	14	+	77511642-77511691	14qD3	Mus musculus coiled-coil domain containing 122 (Ccdc122), mRNA.				4933415L06Rik; MGC106895	4933415L06Rik; MGC106895
Mus musculus	RefSeq	ILMN_196489	ILMN_196489	2810407L07RIK	XM_289902.2	XM_289902.2			38084039	XM_289902.2	2810407L07Rik		ILMN_2524477	004730035	S	993	GGGCGAGGTCCCCAAGGTGCCTCTGACCTTTGATGATGTGGCCATGTATT										
Mus musculus	RefSeq	ILMN_214422	ILMN_214422	D330045A20RIK	NM_175326.4	NM_175326.4		102871	146198767	NM_175326.4	D330045A20Rik	NP_780535.1	ILMN_2706677	000430079	S	3490	GTGATGTCATGTGCTGTACAGTTTTAATGTGGTGAGCAGCCTAAGAACTT				XqF1	Mus musculus RIKEN cDNA D330045A20 gene (D330045A20Rik), mRNA.				AI132325; RP23-219K12.1	AI132325; RP23-219K12.1
Mus musculus	RefSeq	ILMN_196752	ILMN_196752	H2-Q5	NM_010393.2	NM_010393.2		15016	153085392	NM_010393.2	H2-Q5	NP_034523.1	ILMN_1220986	006980600	S	539	GTGAGGACTTCCTGAAAGGCGAATGTGTGAAGAGGCTCCTGGATTACCTG					Mus musculus histocompatibility 2, Q region locus 5 (H2-Q5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			H-2Q5; Qa-5; Qat-5; Qa5	H-2Q5; Qa-5; Qat-5; Qa5
Mus musculus	Riken	ILMN_205478	ILMN_205478	RPS6KA2	ri|D030052D12|PX00180C04|AK050996|1651					AK050996	Rps6ka2		ILMN_2572864	000050154	S	1560	ACGTGTGCCCCGTGCTCTGTACCACGCCTACCCATACACATACACAACTG						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IDA]; Progression through metaphase, the stage of mitosis at which chromosomes are firmly attached to the mitotic spindle at its equator but have not yet segregated to opposite poles [goid 89] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218502	ILMN_218502	ITGAL	NM_008400.2	NM_008400.2		16408	124486679	NM_008400.2	Itgal	NP_032426.2	ILMN_2696629	001170091	S	3394	CGGCATTGGGGGCCTCGTGCTTCTGTTCCTGATTTTCCTGGCGCTCTACA	7	+	134473702-134473751	7qF3	Mus musculus integrin alpha L (Itgal), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IDA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IDA]; Any process that activates or increases the rate or extent of cell adhesion to another cell [goid 22409] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell [goid 22407] [evidence IDA]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Cd11a; Ly-15; LFA-1; Ly-21	Cd11a; Ly-15; LFA-1; Ly-21
Mus musculus	RefSeq	ILMN_218152	ILMN_218152	TEAD3	NM_011566.2	NM_011566.2		21678	117414171	NM_011566.2	Tead3	NP_035696.2	ILMN_2692270	001500747	S	1630	TGACCAGGCTCCACCTGGCCTCAAGTGACACCAGAATTGTACCATGGAGG	17	-	28469738-28469778:28469896-28469904	17qA3.3	Mus musculus TEA domain family member 3 (Tead3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IGI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IGI]	AW125760; TEF-5; Tcf13r2; ETFR-1; TEAD-3; DTEF-1	AW125760; TEF-5; Tcf13r2; ETFR-1; TEAD-3; DTEF-1
Mus musculus	RefSeq	ILMN_201545	ILMN_229024	LOC632667	XM_906862.3	XM_906862.3		632667	149270291	XM_906862.3	LOC632667	XP_911955.3	ILMN_1233175	002360594	S	513	GCGGCGCAGGCCCTTTAAAAATAAAGCTAGGATACAGCCTTTGGAGCAGC					PREDICTED: Mus musculus similar to PNG protein (LOC632667), mRNA.					
Mus musculus	Riken	ILMN_203041	ILMN_203041	CFTR	ri|9130202M18|PX00061G19|AK033621|2837					AK033621	Cftr		ILMN_2554279	006770010	S	2165	GTTGAAGCCAGTCTTAGCTGTCTAATGAGTTCTAGGCCAGTCTGGATCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IMP]; The appearance of interleukin-6 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 32635] [evidence IMP]; The appearance of interleukin-8 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 32637] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200441	ILMN_200441	LOC381716	XM_358648.1	XM_358648.1			38081951	XM_358648.1	LOC381716		ILMN_2538772	007040630	S	475	CCTCTGGTATTGCCTCGCCTATTACTTCTACATGCAACAGCATATGGCCC										
Mus musculus	RefSeq	ILMN_221442	ILMN_221442	SLFN10	NM_181542.4	NM_181542.4		237887	116089303	NM_181542.4	Slfn10	NP_853520.3	ILMN_3138280	006960253	A	506	CGTTGCCATGGATTCAAGGGAAGCATTTGACTTTCTGAAGGGCAAGAAGA	11	-	82849211-82849260	11qC	Mus musculus schlafen 10 (Slfn10), mRNA.				FLJ00257; mFLJ00257	FLJ00257; mFLJ00257
Mus musculus	RefSeq	ILMN_221442	ILMN_221442	SLFN10	NM_181542.4	NM_181542.4		237887	116089303	NM_181542.4	Slfn10	NP_853520.3	ILMN_3060838	005090465	I	566	GTGCAGTCCTACTGATGACAGAGCCAATAAAATTCCAGGAGCCATGTATC	11	-	82849151-82849200	11qC	Mus musculus schlafen 10 (Slfn10), mRNA.				FLJ00257; mFLJ00257	FLJ00257; mFLJ00257
Mus musculus	RefSeq	ILMN_221442	ILMN_221442	SLFN10	NM_181542.4	NM_181542.4		237887	116089303	NM_181542.4	Slfn10	NP_853520.3	ILMN_2735689	004490609	S	2872	GAGGTCCTTAGGACAAGAAGAAAGATAGAACCTTGTTCTGTAGTTTTGGA	11	-	82842206-82842255	11qC	Mus musculus schlafen 10 (Slfn10), mRNA.				FLJ00257; mFLJ00257	FLJ00257; mFLJ00257
Mus musculus	Riken	ILMN_205447	ILMN_205447	NR1H2	ri|E330033P18|PX00318B20|AK054508|1531					AK054508	Nr1h2		ILMN_2572629	004670605	S	1252	GAAGGCGTCCACCATTGAGGTAATAACTAGGCTCTAGGACGAGACCAGAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200717	ILMN_213600	PLEKHA5	NM_144920.3	NM_144920.3		109135	110835705	NM_144920.3	Plekha5	NP_659169.3	ILMN_1235584	000160091	S	702	GGGAAGTATCCTGTTGCCTAGTTTTCAGATAGCCATGCTCACTGCTGAGG	6	+	140483005-140483054	6qG2	Mus musculus pleckstrin homology domain containing, family A member 5 (Plekha5), mRNA.				MGC38455; Gt(pU21)9Imeg; 2810431N21Rik; Pepp2; AK129423; AI428202; Ayu21-9	MGC38455; Gt(pU21)9Imeg; 2810431N21Rik; Pepp2; AK129423; AI428202; Ayu21-9
Mus musculus	RefSeq	ILMN_213600	ILMN_213600	PLEKHA5	NM_144920.3	NM_144920.3		109135	110835705	NM_144920.3	Plekha5	NP_659169.3	ILMN_2914453	005220088	S	4878	TCCTGTGGTTGTGGGTTGGCTTCCGTGCTGGGTTGAGGAGCTTCGCTAGA	6	+	140543172-140543221	6qG2	Mus musculus pleckstrin homology domain containing, family A member 5 (Plekha5), mRNA.				MGC38455; Gt(pU21)9Imeg; 2810431N21Rik; Pepp2; AK129423; AI428202; Ayu21-9	MGC38455; Gt(pU21)9Imeg; 2810431N21Rik; Pepp2; AK129423; AI428202; Ayu21-9
Mus musculus	RefSeq	ILMN_213600	ILMN_213600	PLEKHA5	NM_144920.3	NM_144920.3		109135	110835705	NM_144920.3	Plekha5	NP_659169.3	ILMN_2914456	004220184	S	4659	CGCCGTTTCTATATGTTTTCTCAGCATCCACTGCCTCTTACAATGCTGGG	6	+	140542953-140543002	6qG2	Mus musculus pleckstrin homology domain containing, family A member 5 (Plekha5), mRNA.				MGC38455; Gt(pU21)9Imeg; 2810431N21Rik; Pepp2; AK129423; AI428202; Ayu21-9	MGC38455; Gt(pU21)9Imeg; 2810431N21Rik; Pepp2; AK129423; AI428202; Ayu21-9
Mus musculus	RefSeq	ILMN_220660	ILMN_220660	PTGIS	NM_008968.3	NM_008968.3		19223	141802458	NM_008968.3	Ptgis	NP_032994.1	ILMN_2724942	003140100	S	1551	CCTCAGCAGATATGGCTTCGGTCTGATGCAGCCAGAGGAAGACGTGCCCA	2	-	167028846-167028895	2qH3	Mus musculus prostaglandin I2 (prostacyclin) synthase (Ptgis), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-6,9-alpha-epoxy-11-alpha,15-dihydroxyprosta-5,13-dienoate [goid 8116] [evidence IEA]	Pgi2; Cyp8a1; Pgis; Cyp8; Ptgi	Pgi2; Cyp8a1; Pgis; Cyp8; Ptgi
Mus musculus	Riken	ILMN_206857	ILMN_206857	D630022O22RIK	ri|D630022O22|PX00197G01|AK085407|4084					AK085407	D630022O22Rik		ILMN_1223311	003890292	S	3729	GCATGGTGAGGTCCTCTGAGCCGACCAGTCAGTTCTTAATGTTTGCTACG										
Mus musculus	RefSeq	ILMN_234611	ILMN_234611	WHDC1	NM_001004185.2	NM_001004185.2		434204	52138589	NM_001004185.2	Whdc1	NP_001004185.2	ILMN_3160616	004040639	S	2281	CACAACCCTAGGTCAGCGAGGCCCTGAGAAGCTGCAACACGGGGAGGTCA	7	+	88741099-88741148	7qD3	Mus musculus WAS protein homology region 2 domain containing 1 (Whdc1), mRNA.			Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	mKIAA1971; KIAA1971; MGC58752; BB081391; MGC51670	mKIAA1971; KIAA1971; MGC58752; BB081391; MGC51670
Mus musculus	RefSeq	ILMN_215434	ILMN_215434	ZFAND2B	NM_026846.2	NM_026846.2		68818	142370159	NM_026846.2	Zfand2b	NP_081122.1	ILMN_2659440	001820195	S	778	CGACTTGGCGTTAGCACAGGCACTGTCAGCCAGTGAGGCAGAATACCAAC	1	+	75167565-75167614	1qC3	Mus musculus zinc finger, AN1 type domain 2B (Zfand2b), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1110060O18Rik; C81256	1110060O18Rik; C81256
Mus musculus	RefSeq	ILMN_215434	ILMN_215434	ZFAND2B	NM_026846.2	NM_026846.2		68818	142370159	NM_026846.2	Zfand2b	NP_081122.1	ILMN_2676634	001770242	S	319	TCCTGACCGTGCTGTGGGAGAGCACATTGACAGAGACTGTCGTTCTGACC	1	+	75166136-75166185	1qC3	Mus musculus zinc finger, AN1 type domain 2B (Zfand2b), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1110060O18Rik; C81256	1110060O18Rik; C81256
Mus musculus	RefSeq	ILMN_215434	ILMN_215434	ZFAND2B	NM_026846.2	NM_026846.2		68818	142370159	NM_026846.2	Zfand2b	NP_081122.1	ILMN_2763951	001010195	S	1051	TCTGCTGCTGCAGAAGAGGGTGGCCGGGAAGTGCTCTCTGGTTGGGGCCT	1	+	75168025-75168074	1qC3	Mus musculus zinc finger, AN1 type domain 2B (Zfand2b), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1110060O18Rik; C81256	1110060O18Rik; C81256
Mus musculus	RefSeq	ILMN_222860	ILMN_222860	CNP	NM_009923.1	NM_009923.1		12799	6753475	NM_009923.1	Cnp	NP_034053.1	ILMN_1257097	005390072	S	1291	CAAACCTGTGCCCATACATGGCAGCCGGAAGGGGGGTGCCATGCAGATCT	11	+	100442047-100442096	11qD	Mus musculus 2',3'-cyclic nucleotide 3' phosphodiesterase (Cnp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9214] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]	Catalysis of the reaction: nucleoside 2',3'-cyclic phosphate + H2O = nucleoside 2'-phosphate [goid 4113] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CNPase; Cnp; Cnp1; Cnp-1	CNPase; Cnp; Cnp1; Cnp-1
Mus musculus	RefSeq	ILMN_222860	ILMN_222860	CNP	NM_009923.1	NM_009923.1		12799	6753475	NM_009923.1	Cnp	NP_034053.1	ILMN_2802263	006940079	S	2010	GCCCATCTTGCCTGCATGGTGCCTCTGGGTCTTTAAAGGAGGGTGGTAGG	11	+	100442766-100442815	11qD	Mus musculus 2',3'-cyclic nucleotide 3' phosphodiesterase (Cnp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9214] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]	Catalysis of the reaction: nucleoside 2',3'-cyclic phosphate + H2O = nucleoside 2'-phosphate [goid 4113] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CNPase; Cnp; Cnp1; Cnp-1	CNPase; Cnp; Cnp1; Cnp-1
Mus musculus	RefSeq	ILMN_197484	ILMN_197484	LOC229066	XM_159758.4	XM_159758.4			38076195	XM_159758.4	LOC229066		ILMN_1233211	004230370	S	1649	CCCTGGATAATGAAGGCAAGTCAGAAGCTGACCACCTGTGGCATCCTAAG										
Mus musculus	RefSeq	ILMN_198748	ILMN_198748	LOC194615	XM_112107.2	XM_112107.2			38087227	XM_112107.2	LOC194615		ILMN_2532783	006960370	S	2364	TGCATTCATGCTTTGTTGGCCCTCTGCCAGTGAGAGTGCTCTGGGAACCC										
Mus musculus	RefSeq	ILMN_199989	ILMN_326666	LOC627317	XR_033591.1	XR_033591.1		627317	149253625	XR_033591.1	LOC627317		ILMN_1236037	005310564	S	454	ACAAGAAGCGCAGAGCAGGCTGCATTGGGGCCTCAGAATCAGCAAAGAGG	5	-	23515755-23515804	5qA3	PREDICTED: Mus musculus similar to ribosomal protein L11 (LOC627317), misc RNA.					
Mus musculus	RefSeq	ILMN_244520	ILMN_244520	MMP16	NM_019724.2	NM_019724.2		17389	40254543	NM_019724.2	Mmp16	NP_062698.2	ILMN_2980226	006560605	S	2168	AGCCTGATGGAGGCTGACCTTCCAAACCTAGATGGTTGCTGGTCCTGCAC	4	+	18043473-18043522	4qA3	Mus musculus matrix metallopeptidase 16 (Mmp16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Mt3mmp; MT3-MMP	Mt3mmp; MT3-MMP
Mus musculus	RefSeq	ILMN_186946	ILMN_244520	MMP16	NM_019724.2	NM_019724.2		17389	40254543	NM_019724.2	Mmp16	NP_062698.2	ILMN_1246138	007100438	S	1606	AGGTGACAGGTATTGGAGATATAGTGAAGAAATGAAAACCATGGACCCTG	4	+	18037719-18037725:18039146-18039188	4qA3	Mus musculus matrix metallopeptidase 16 (Mmp16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Mt3mmp; MT3-MMP	Mt3mmp; MT3-MMP
Mus musculus	MEEBO	ILMN_194812	ILMN_194812	A830054O04RIK	scl37518.1_564				31342977	NM_177172	A830054O04Rik		ILMN_1252423	003710164	S	884	CAGACCAGCATTTTCGTGCTCTCCTCGGAAGCCTTGAGGTCTTAGAATCC										
Mus musculus	MEEBO	ILMN_194812	ILMN_194812	A830054O04RIK	scl37518.1_564				31342977	NM_177172	A830054O04Rik		ILMN_1230312	004890253	S	13	CCCAGATGATTGGAATATGCCTAGTTCTTTCTGCCTACTGTTGGAGCCCG										
Mus musculus	MEEBO	ILMN_214123	ILMN_214123	RNASE4	scl000323.1_2				47679096	NM_201239	Rnase4		ILMN_2644504	005550369	S	18	CTCCAGGAGCACGCAGCTGGACACATTCCCAGTCGGAGGAAAGCTGGCCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199776	ILMN_199776	LOC382997	XM_356790.1	XM_356790.1			38077214	XM_356790.1	LOC382997		ILMN_1245834	003840669	S	1152	GATGAGGAGGAAGTACTTCAAGGTTCTGGGTGGTTCCATCTCATGGGCCG										
Mus musculus	RefSeq	ILMN_218312	ILMN_218312	SRP14	NM_009273.4	NM_009273.4		20813	90962995	NM_009273.4	Srp14	NP_033299.1	ILMN_2694245	000450195	S	549	GTGGTAAGACGCCAGTTTTTGATTTGTGCTGTGTGGCTGGATATTCTTAG	2	-	118301770-118301819	2qE5	Mus musculus signal recognition particle 14 (Srp14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A complex of protein and RNA which facilitates translocation of proteins across membranes [goid 48500] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of translational elongation [goid 45900] [evidence IEA]; The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an endoplasmic reticulum signal peptide, a specific peptide sequence that acts as a signal to localize the protein within the endoplasmic reticulum [goid 30942] [evidence IEA]; Interacting selectively with 7S RNA, the RNA component of the signal recognition particle (SRP) [goid 8312] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW536328; 14kDa	AW536328; 14kDa
Mus musculus	RefSeq	ILMN_200093	ILMN_311946	LOC100040885	XM_001475785.1	XM_001475785.1		100040885	149254033	XM_001475785.1	LOC100040885	XP_001475835.1	ILMN_1252554	003460452	S	115	CCCTTACTATACAGTGACTACCAGAGCCTTCTTCCTGAAGACCTGAGAGG	5	-	93914387-93914387:93914388-93914414:93922596-93922617	5qE2	PREDICTED: Mus musculus similar to Expressed sequence AA792892, transcript variant 3 (LOC100040885), mRNA.					
Mus musculus	RefSeq	ILMN_211853	ILMN_211853	1810055E12RIK	NM_026437.2	NM_026437.2		67894	142366486	NM_026437.2	1810055E12Rik	NP_080713.1	ILMN_2637624	006550431	S	1952	GCAGTAAAGGAATTTGGCCACATCATCAGGACACTGTTATTAGCCTCTCT	19	+	60911775-60911824	19qD3	Mus musculus RIKEN cDNA 1810055E12 gene (1810055E12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211853	ILMN_211853	1810055E12RIK	NM_026437.2	NM_026437.2		67894	142366486	NM_026437.2	1810055E12Rik	NP_080713.1	ILMN_2620131	003940504	S	282	CTGACCGCCAAAGATTTTAACCCAGAGAAATATGCCGCCTTCACTAGGAT	19	+	60893455-60893504	19qD3	Mus musculus RIKEN cDNA 1810055E12 gene (1810055E12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211675	ILMN_211675	ICAM2	NM_010494.1	NM_010494.1		15896	6754273	NM_010494.1	Icam2	NP_034624.1	ILMN_2618408	007510452	S	1029	AACATGGCACCTTCAAGGTGTGGTTCGGCACTGGCTGAAGGACTGTGGCG	11	-	106239033-106239082	11qE1	Mus musculus intercellular adhesion molecule 2 (Icam2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Icam-2; CD102; Ly-60	Icam-2; CD102; Ly-60
Mus musculus	RefSeq	ILMN_215645	ILMN_254882	GINS1	XM_918384.3	XM_918384.3		69270	149249783	XM_918384.3	Gins1	XP_923477.1	ILMN_2661950	006220634	S	786	CTCACTGGACCTCCCCCTCCTTGGTTTTAAATTGACAGACATGCATTAAC				2qG3	PREDICTED: Mus musculus GINS complex subunit 1 (Psf1 homolog), transcript variant 4 (Gins1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_201069	ILMN_201069	LOC381982	XM_356030.1	XM_356030.1			38088542	XM_356030.1	LOC381982		ILMN_2540964	006420711	S	330	GGACCCGAGTGCTCTATGGCTGTTTTGGGTGCTGGGTTATTCCAACCCTC										
Mus musculus	RefSeq	ILMN_220049	ILMN_220049	PRSS2	NM_009430.1	NM_009430.1		22072	6678438	NM_009430.1	Prss2	NP_033456.1	ILMN_2716989	003370484	S	741	CAATTGCTGACAACTAGAGAACCCTAGTCTCTCTTCAATCAGTATTATCA	6	+	41473908-41473957	6qB1	Mus musculus protease, serine, 2 (Prss2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein during the chemical reactions and pathways resulting in the breakdown of a protein by individual cells [goid 51603] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	TRY8; Ta; Tesp4; TRYP; Try2	TRY8; Ta; Tesp4; TRYP; Try2
Mus musculus	RefSeq	ILMN_217746	ILMN_217746	RFFL	NM_026097.1	NM_026097.1		67338	16975487	NM_026097.1	Rffl	NP_080373.1	ILMN_1251074	006860398	S	1151	CTGGCCTGGAGGAGAACCTGTGTAAGATTTGCATGGACTCACCCATTGAC	11	-	82619626-82619675	11qC	Mus musculus ring finger and FYVE like domain containing protein (Rffl), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BG080975; MGC144763; 4930516L10Rik; 1700051E09Rik	BG080975; MGC144763; 4930516L10Rik; 1700051E09Rik
Mus musculus	RefSeq	ILMN_209632	ILMN_259397	RRBP1	NM_024281.2	NM_024281.2		81910	124486711	NM_024281.2	Rrbp1	NP_077243.2	ILMN_2597686	001770279	S	4930	CCAGGGTGTGCTGGGAGTCCAGGACTCTCGGGGTTTATGTCAATCAGTGC	2	-	143773328-143773377	2qG1	Mus musculus ribosome binding protein 1 (Rrbp1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1700087N07Rik; 5730465C04Rik; mRRp2; mRRp1.8; p180; mRRp5.4; mRRp41; mKIAA1398; mRRp15b; mRRp10; mRRp15a; ES/130; mRRp47; mRRp0; mRRp16.8	1700087N07Rik; 5730465C04Rik; mRRp2; mRRp1.8; p180; mRRp5.4; mRRp41; mKIAA1398; mRRp15b; mRRp10; mRRp15a; ES/130; mRRp47; mRRp0; mRRp16.8
Mus musculus	RefSeq	ILMN_222010	ILMN_224591	ARFIP1	NM_001081093.1	NM_001081093.1		99889	124487361	NM_001081093.1	Arfip1	NP_001074562.1	ILMN_2743425	003610386	S	2876	GCTCTGAGAGAGCTTCATTTTATTCTCCCAGCAGAGTAACTTGTGATGGT	3	-	84300082-84300131	3qF1	Mus musculus ADP-ribosylation factor interacting protein 1 (Arfip1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence ISO]; Any process that modulates the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50708] [evidence ISO]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	Arfaptin; 2310030I10Rik; D3Ertd598e; AW123087	Arfaptin; 2310030I10Rik; D3Ertd598e; AW123087
Mus musculus	MEEBO	ILMN_196081	ILMN_196081	1700019B21RIK	scl54199.4.1_240						1700019B21Rik		ILMN_1254273	007650164	S	1	GCCAAGCTCATGCAAGAAAACAAAAAAATGTTAACAAATCTTAATAAAGT										
Mus musculus	RefSeq	ILMN_216647	ILMN_216647	CYP21A1	NM_009995.1	NM_009995.1		13079	6753569	NM_009995.1	Cyp21a1	NP_034125.1	ILMN_2879008	004070424	S	1415	GGCTGCAGCCCAGAAACCTGGCGCCCCAAGACCAGGGTGAGCGTCCTTGA	17	-	34939812-34939836:34939930-34939954	17qB1	Mus musculus cytochrome P450, family 21, subfamily a, polypeptide 1 (Cyp21a1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: a steroid + donor-H2 + O2 = a 21-hydroxysteroid + acceptor + H2O [goid 4509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Cyp21; 21-OH; MGC156449; 21OHA; Oh21-1; CYP21OH-A; 21OH	Cyp21; 21-OH; MGC156449; 21OHA; Oh21-1; CYP21OH-A; 21OH
Mus musculus	RefSeq	ILMN_216647	ILMN_216647	CYP21A1	NM_009995.1	NM_009995.1		13079	6753569	NM_009995.1	Cyp21a1	NP_034125.1	ILMN_2673575	005220538	S	729	GGTTGCAGGCCAATGGAAAGACATGATTGACTACATGCTCCAGGGAGTGG	17	-	34940585-34940634	17qB1	Mus musculus cytochrome P450, family 21, subfamily a, polypeptide 1 (Cyp21a1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: a steroid + donor-H2 + O2 = a 21-hydroxysteroid + acceptor + H2O [goid 4509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Cyp21; 21-OH; MGC156449; 21OHA; Oh21-1; CYP21OH-A; 21OH	Cyp21; 21-OH; MGC156449; 21OHA; Oh21-1; CYP21OH-A; 21OH
Mus musculus	RefSeq	ILMN_191296	ILMN_235361	PCDH12	NM_017378.2	NM_017378.2		53601	120444907	NM_017378.2	Pcdh12	NP_059074.2	ILMN_1245119	007550347	S	5499	GGAGCTCCATCTTACGTAGCCAGGTGCCTGGCACAGGTGACACTTGAAAC	18	-	38426784-38426833	18qB3	Mus musculus protocadherin 12 (Pcdh12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	VE-cad-2; Pcdh14	VE-cad-2; Pcdh14
Mus musculus	Riken	ILMN_205347	ILMN_205347	B130032G09RIK	ri|B130032G09|PX00157H21|AK045099|5634					AK045099	B130032G09Rik		ILMN_1247168	006580451	S	5231	ACACCAAGCTTGCCCTGGCCTCTGCACACACACTCACACATGTGCAGCTG										
Mus musculus	RefSeq	ILMN_201377	ILMN_201377	LOC385063	XM_358027.1	XM_358027.1			38093412	XM_358027.1	LOC385063		ILMN_1232717	004860632	S	57	CAGGGAGTTCACCGACCATGAGCTTCAGGAAGACACCTCCAAGTTCACTG										
Mus musculus	Riken	ILMN_207038	ILMN_207038	5430405G05RIK	ri|5430405G05|PX00022I06|AK077378|1423					AK077378	5430405G05Rik		ILMN_2584574	005290491	S	1353	GCAGCTTGAGGTTTTCGCATAAGGCTTTGTTTGAGGATGGCTTCTGCTGC										
Mus musculus	MEEBO	ILMN_218154	ILMN_218154	POU2F1	scl000818.1_56	NM_198932.1			39573727	NM_198932.1	Pou2f1		ILMN_1244969	001400192	S	1617	CTGCTAGGTCATGAAGGTTCTACGACCTAAGATGTGAGTTGGTTGTGGGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IGI]; The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity [goid 30910] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218642	ILMN_218642	OLFR853	NM_146906.1	NM_146906.1		258908	22129072	NM_146906.1	Olfr853	NP_667117.1	ILMN_1236688	000580707	S	601	GTCATGAGTAGTGCATTAGGTGGTATGCCCCTAGTAGGGATTATTTTCTC	9	-	19341722-19341771	9qA2	Mus musculus olfactory receptor 853 (Olfr853), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR154-1	MOR154-1
Mus musculus	RefSeq	ILMN_200236	ILMN_200236	LOC386039	XM_359039.1	XM_359039.1			38081033	XM_359039.1	LOC386039		ILMN_1222328	000780136	S	1561	GATGGAGGAGGACCAGTGGCTGAAGTTGTTGGGATTTGCAGTACCCAGCT										
Mus musculus	RefSeq	ILMN_197249	ILMN_197249	LOC269279	XM_196271.2	XM_196271.2			38074788	XM_196271.2	LOC269279		ILMN_1258284	006560553	S	1521	GGCAACTTCCGACGACAGCGTAAGGATGTTTTCCATAGCTCAGGCATGGC										
Mus musculus	RefSeq	ILMN_218555	ILMN_218555	KLHL36	NM_146219.1	NM_146219.1		234796	22122778	NM_146219.1	Klhl36	NP_666331.1	ILMN_2697238	005050470	S	1717	ACAGTGCAACCAGTGGACTCGCGTGGCGCCGCTGCTGCAGGCCAACAGCG	8	+	122400464-122400513	8qE1	Mus musculus kelch-like 36 (Drosophila) (Klhl36), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC37805	MGC37805
Mus musculus	MEEBO	ILMN_216461	ILMN_216461	4933425A18RIK	scl071147.1_23	XM_127578.2			28477157	XM_127578.2	4933425A18Rik		ILMN_1249882	002360577	S	1884	CAGCCAGTGATTCACCCCTGACCCATGTAGTGTCCTTGGTGGAATTTCCC										
Mus musculus	RefSeq	ILMN_198482	ILMN_258418	EG629643	XM_894554.2	XM_894554.2		629643	149270580	XM_894554.2	EG629643	XP_899647.1	ILMN_2531854	007320026	S	190	AGCATCGGCAAGATCCCTGGCGCCCAGAACCACCACTACATCAAGCTGAT	19	-	56829597-56829646	19qD2	PREDICTED: Mus musculus predicted gene, EG629643 (EG629643), mRNA.					
Mus musculus	RefSeq	ILMN_217419	ILMN_217419	CACNG5	NM_080644.2	NM_080644.2		140723	31542336	NM_080644.2	Cacng5	NP_542375.1	ILMN_2812240	001780010	S	3313	TTCTCTCTCTAAAACACTTCTCTATCACCGTGCCAGGCTTGCTTGTGTAC	11	-	107691010-107691059	11qE1	Mus musculus calcium channel, voltage-dependent, gamma subunit 5 (Cacng5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]		
Mus musculus	MEEBO	ILMN_194249	ILMN_194249	RTTN	scl51708.13.1_311				37704388	NM_175542	Rttn		ILMN_2507594	000610307	S	6	CCACAGTTACCCTGAGATTATTGGACTCTGGGATGAGAGGATAGTTTGAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_194249	ILMN_194249	RTTN	scl51708.13.1_311				37704388	NM_175542	Rttn		ILMN_1222029	000670170	S	2	CACTTACAGGCCTAGTGCTCAGGAAACAGAAGCAGGAGACTCACTAGTAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_194249	ILMN_194249	RTTN	scl51708.13.1_311				37704388	NM_175542	Rttn		ILMN_2732801	001110121	S	7060	GACAGCAGCCGCCAAACTGAAAGGAGTAGAACTGGTGACTTCTCAGGCTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_199465	ILMN_317269	LOC100045869	XM_001475055.1	XM_001475055.1		100045869	149234014	XM_001475055.1	LOC100045869	XP_001475105.1	ILMN_2535306	000160128	S	203	ATGGAAGCCTGAAAGCCCTCCGTGAAACAAAGTGCTCTCGACAGGAAGTC					PREDICTED: Mus musculus similar to Limb expression 1 homolog (chicken) (LOC100045869), mRNA.					
Mus musculus	Riken	ILMN_204188	ILMN_204188	HSD17B11	ri|B230310J06|PX00159N11|AK045775|1490					AK045775	Hsd17b11		ILMN_1212711	002120274	S	1297	ACTGAGAAAGACGAGGCTACCCAGGCTTTAGTTTTCAGAAGGCCAGGGAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199386	ILMN_199386	OLFR1219	NM_146899.1	NM_146899.1		258901	22129084	NM_146899.1	Olfr1219	NP_667110.1	ILMN_2940661	006350563	S	407	CTCGGAGGCTCTGTGGAATTTTGGTAGTGGTGTCTTGGGCAGGAGGCTTC	2	-	88914790-88914839	2qE1	Mus musculus olfactory receptor 1219 (Olfr1219), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR233-6	MOR233-6
Mus musculus	RefSeq	ILMN_200578	ILMN_200578	LOC383372	XM_357016.1	XM_357016.1			38083879	XM_357016.1	LOC383372		ILMN_1252735	007100360	S	1592	GGCTGGACATTGGTGATAACCAGGTTGCTGGAGAAGAGTCAGACGTAGAT										
Mus musculus	Riken	ILMN_206742	ILMN_206742	D230031B15RIK	ri|D230031B15|PX00189N15|AK084360|2716					AK084360	D230031B15Rik		ILMN_1254122	000360440	S	2327	GAGAGGAAGATTGGGAATTTGAGACCAGCCTGGGCAACAGAGTGAGACCC										
Mus musculus	Riken	ILMN_202826	ILMN_202826	9130230H23RIK	ri|9130230H23|PX00061K03|AK033716|2232					AK033716	9130230H23Rik		ILMN_1232097	000110397	S	453	CATTGAGCACATCAGGATCCACACAGCAGGACAGTTGTCCAGCTTGCCAC										
Mus musculus	MEEBO	ILMN_222413	ILMN_222413	1600014C23RIK	scl49880.2.1_125	XM_128667.1			20900138	XM_128667.1	1600014C23Rik		ILMN_2749223	002750474	S	402	TTCTGTCCTGGTCCTTCATGTATGTAGTTAAGAGAGGGCTTCCAGCGTGT										
Mus musculus	RefSeq	ILMN_197255	ILMN_197255	LOC228036	XM_149149.1	XM_149149.1			20837296	XM_149149.1	LOC228036		ILMN_1213898	002900086	S	408	TGGACTGGAGGCAGGATTATTGCTTACGGCTGAACCAGGGAGGTTTCTGG										
Mus musculus	MEEBO	ILMN_196228	ILMN_196228	TRIO	scl0223435.1_11						Trio		ILMN_2522750	004290497	S	18	AAAAGAGACCAGCTTGCTTCCCAAGCCAGACAGACATCTGGGTCGTGAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_215336	ILMN_215336	GPR22	NM_175191.2	NM_175191.2		73010	31340849	NM_175191.2	Gpr22	NP_780400.1	ILMN_2658266	004200450	S	4160	CCTCACTGACCTGCCTCGTCCCTGGGGGAATGAATGTGATACTGCAGCTT	12	-	32292444-32292493	12qA3	Mus musculus G protein-coupled receptor 22 (Gpr22), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	2900068K05Rik; MGC107197; AW061316	2900068K05Rik; MGC107197; AW061316
Mus musculus	RefSeq	ILMN_208768	ILMN_233455	KRTAP16-10	NM_183296.1	NM_183296.1		71369	50080210	NM_183296.1	Krtap16-10	NP_899119.1	ILMN_1228660	004070224	S	453	TCTATAATCTTCCCATCGAATTTATGGCTTCATCTGTTATATTCAGTCAA	16	-	88962616-88962665	16qC3.3	Mus musculus keratin associated protein 16-10 (Krtap16-10), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			5430404J20Rik	5430404J20Rik
Mus musculus	RefSeq	ILMN_196899	ILMN_314327	LOC667014	XM_001473655.1	XM_001473655.1		667014	149233969	XM_001473655.1	LOC667014	XP_001473705.1	ILMN_1234927	007150692	S	651	GAGTCCCAGAATTGTTTCTGCCGCTCAGAAAACTTGAGTCTGACATTAAG				1qC1.1	PREDICTED: Mus musculus similar to ribosomal protein L15 (LOC667014), mRNA.					
Mus musculus	Riken	ILMN_207293	ILMN_207293	PIK3C2G	ri|4732416A12|PX00637H17|AK076317|3270					AK076317	Pik3c2g		ILMN_2586510	005340746	S	3057	ACGGAAGAAGGAAACTCTGCTGAGCTCTCAACTACAGAGAAAGCGTTCTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate [goid 35005] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214348	ILMN_214348	GPR19	NM_008157.1	NM_008157.1		14760	6680070	NM_008157.1	Gpr19	NP_032183.1	ILMN_1257801	003420326	S	1199	CGGAAATCCCTCCCGTGAGCAGGACCATAACCAAAGACTCCATCTATGAC	6	-	134819305-134819354	6qG1	Mus musculus G protein-coupled receptor 19 (Gpr19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209168	ILMN_209168	IQCF3	NM_026645.2	NM_026645.2		68265	83627710	NM_026645.2	Iqcf3	NP_080921.2	ILMN_2787448	001450386	S	557	CCAGGCTGCAGGGGAGGAAGTTACATGAGGTGATGCGCTACAGACTGAGA	9	-	106402545-106402547:106410840-106410886	9qF1	Mus musculus IQ motif containing F3 (Iqcf3), mRNA.				1700012F17Rik; AV040440	1700012F17Rik; AV040440
Mus musculus	RefSeq	ILMN_223612	ILMN_223612	ESRRA	NM_007953.2	NM_007953.2		26379	112293261	NM_007953.2	Esrra	NP_031979.2	ILMN_2972292	002000474	S	2076	ATTTATTTTTGGGTTTGGCCAGGGAGGCGCAGGGCCATGGGGCAAGCCAG	19	-	6985583-6985632	19qA	Mus musculus estrogen related receptor, alpha (Esrra), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	ERRalpha; Err1; Estrra; Nr3b1	ERRalpha; Err1; Estrra; Nr3b1
Mus musculus	MEEBO	ILMN_224006	ILMN_224006	H2-OA	scl50833.5.1_17				6680150	NM_008206	H2-Oa		ILMN_2773037	005050739	S	811	TTCTGGAAGCTTCTGCGTGCTCAGCGGCAGCCTGTGACAGTGTTGACCTC							The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IMP]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]			
Mus musculus	RefSeq	ILMN_192405	ILMN_231867	TRAPPC10	NM_001081055.1	NM_001081055.1		216131	124486683	NM_001081055.1	Trappc10	NP_001074524.1	ILMN_2487787	005960292	S	4731	GCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGTCGATTATACAGCT	10	-	77665737-77665767:77666626-77666644	10qC1	Mus musculus trafficking protein particle complex 10 (Trappc10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Gm870; B230307C21Rik	Gm870; B230307C21Rik
Mus musculus	RefSeq	ILMN_192405	ILMN_231867	TRAPPC10	NM_001081055.1	NM_001081055.1		216131	124486683	NM_001081055.1	Trappc10	NP_001074524.1	ILMN_1260536	002490491	I	4809	AGCTGGGCCACTGGGTTGCAGTCATACCGCACCAACGGGTTCATTTACTT	10	-	77665659-77665708	10qC1	Mus musculus trafficking protein particle complex 10 (Trappc10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Gm870; B230307C21Rik	Gm870; B230307C21Rik
Mus musculus	RefSeq	ILMN_256266	ILMN_256266	NDUFB10	NM_026684.1	NM_026684.1		68342	58037108	NM_026684.1	Ndufb10	NP_080960.1	ILMN_2900216	001300725	S	528	GCAGAAGCAGAGAATGCTGGAAGAAAGGAAGGCTGCGAGGCAGGAGGCTG	17	-	24449724-24449773	17qA3.3	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 (Ndufb10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		PDSW; 0610011B04Rik; 22kDa	PDSW; 0610011B04Rik; 22kDa
Mus musculus	RefSeq	ILMN_216698	ILMN_216698	TFF2	NM_009363.3	NM_009363.3		21785	142385262	NM_009363.3	Tff2	NP_033389.2	ILMN_1228211	003780386	S	498	TCTCTGGGGTTTCTAAAACCATCTTGACCCTTAGCAGTGGCTAGACACAG	17	-	31278030-31278079	17qA3.3	Mus musculus trefoil factor 2 (spasmolytic protein 1) (Tff2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			SP; mSP	SP; mSP
Mus musculus	RefSeq	ILMN_225401	ILMN_225401	BC026590	NM_001081420.1	NM_001081420.1		230234	124487244	NM_001081420.1	BC026590	NP_001074889.1	ILMN_3051252	001510224	I	4103	CAGCAGAAGGCAAGCCCTACACTGACGGAGCCTTTTCTCCAGCCTCACTC	4	+	56822281-56822330	4qB3	Mus musculus cDNA sequence BC026590 (BC026590), mRNA.				RP23-455B1.1	RP23-455B1.1
Mus musculus	RefSeq	ILMN_213589	ILMN_225401	BC026590	NM_001081420.1	NM_001081420.1		230234	124487244	NM_001081420.1	BC026590	NP_001074889.1	ILMN_1257772	006900402	S	4215	AGCTCCTGAGAAAGATTGTGGTTTTACAGTTCTGTCACCAGGGAGTAAAC	4	+	56822393-56822442	4qB3	Mus musculus cDNA sequence BC026590 (BC026590), mRNA.				RP23-455B1.1	RP23-455B1.1
Mus musculus	RefSeq	ILMN_198281	ILMN_198281	LOC381147	XM_355071.1	XM_355071.1			38083617	XM_355071.1	LOC381147		ILMN_1224784	002120326	S	1130	GCTCTGATGACTGATGACTTGACCTCTCCTGGCCGCAATTCCCCAGATTG										
Mus musculus	RefSeq	ILMN_219298	ILMN_219298	CYP3A44	NM_177380.3	NM_177380.3		337924	118130400	NM_177380.3	Cyp3a44	NP_796354.1	ILMN_1247769	002850100	S	1893	CTTTAGATAGTAACCACGTGTTTGTAATTTGATCAAGAATTTTTGATGAA	5	-	146585578-146585627	5qG2	Mus musculus cytochrome P450, family 3, subfamily a, polypeptide 44 (Cyp3a44), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_210418	ILMN_210418	CCDC97	NM_028771.2	NM_028771.2		52132	142373814	NM_028771.2	Ccdc97	NP_083047.1	ILMN_2605423	006620528	S	2491	CACCCAGTGGGGTAGAAGGTGTTCTCTTAAACTGTTGAAAGATCCTCAAC	7	-	26496581-26496630	7qA3	Mus musculus coiled-coil domain containing 97 (Ccdc97), mRNA.				D7Ertd462e; 1200014H14Rik; 2810446P04Rik; AA545218	D7Ertd462e; 1200014H14Rik; 2810446P04Rik; AA545218
Mus musculus	RefSeq	ILMN_218173	ILMN_321468	LOC100045160	XM_001474043.1	XM_001474043.1		100045160	149253549	XM_001474043.1	LOC100045160	XP_001474093.1	ILMN_2692573	001300056	S	354	AAAGCAGAAGGAGCTCATGACATTGCAACACGACTTAGAGATGGCAACCA					PREDICTED: Mus musculus similar to spermatogenesis associated glutamate (E)-rich protein 4f (LOC100045160), mRNA.					
Mus musculus	MEEBO	ILMN_211345	ILMN_211345	PJA1	scl018744.1_4	NM_008853.1			6679342	NM_008853.1	Pja1		ILMN_2614884	005670008	S	1894	TTTGTTGCATGTCATGGGTTAATGTTCCTGTATTTGCAGTGGTGTAAAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	MEEBO	ILMN_220409	ILMN_220409	A630062H14	scl23220.4.1_166				51708059	XM_488997	A630062H14		ILMN_1220371	004390500	S	857	CCTCGTTGTGTGATAACTACCTCTGTCCCTAAATCATTTTCAATTAGTTG										
Mus musculus	RefSeq	ILMN_208914	ILMN_208914	DHDH	NM_027903.1	NM_027903.1		71755	27229130	NM_027903.1	Dhdh	NP_082179.1	ILMN_2971314	000830195	S	2490	AGTTTGAGGCCAAGCAGAACAACCCAGTTAGAGGCTGAGAGAAGCCAGAC	7	-	45341803-45341852	7qB4	Mus musculus dihydrodiol dehydrogenase (dimeric) (Dhdh), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: D-xylose + NADP+ = D-xylono-1,5-lactone + NADPH [goid 47837] [evidence IEA]; Catalysis of the reaction: NADP+ + trans-1,2-dihydrobenzene-1,2-diol = NADPH + catechol [goid 47115] [evidence IEA]	AA591799; 1300018L09Rik	AA591799; 1300018L09Rik
Mus musculus	RefSeq	ILMN_208914	ILMN_208914	DHDH	NM_027903.1	NM_027903.1		71755	27229130	NM_027903.1	Dhdh	NP_082179.1	ILMN_2689939	003180324	S	145	GACCTGAACCGGGCCGAGGAGTTCGCACAGAAATTCAACATCCCCAAGGC	7	-	45356142-45356191	7qB4	Mus musculus dihydrodiol dehydrogenase (dimeric) (Dhdh), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: D-xylose + NADP+ = D-xylono-1,5-lactone + NADPH [goid 47837] [evidence IEA]; Catalysis of the reaction: NADP+ + trans-1,2-dihydrobenzene-1,2-diol = NADPH + catechol [goid 47115] [evidence IEA]	AA591799; 1300018L09Rik	AA591799; 1300018L09Rik
Mus musculus	RefSeq	ILMN_200728	ILMN_200728	LOC384516	XM_357685.1	XM_357685.1			38085602	XM_357685.1	LOC384516		ILMN_2539791	003710373	S	61	TCCACTGAGTACCTGTTGTTGTCACAGTATCAGGACTTCTTGGAAGAAAG										
Mus musculus	RefSeq	ILMN_196074	ILMN_235059	RASEF	NM_001017427.1	NM_001017427.1		242505	62945395	NM_001017427.1	Rasef	NP_001017427.1	ILMN_1240745	004560458	S	2002	AGGACAGAGGATGACGACAGCAGATCTATCACCAGTCTGGCTGGGTCTAC	4	-	73363614-73363663	4qC3	Mus musculus RAS and EF hand domain containing (Rasef), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	BC030882; RAB45	BC030882; RAB45
Mus musculus	RefSeq	ILMN_196074	ILMN_235059	RASEF	NM_001017427.1	NM_001017427.1		242505	62945395	NM_001017427.1	Rasef	NP_001017427.1	ILMN_1212704	004290408	S	3274	GTGTGACTGCTCCTCACTGGTTTTGTTTTTCTCCTGGAACCTGCAGTGCC	4	-	73362342-73362391	4qC3	Mus musculus RAS and EF hand domain containing (Rasef), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	BC030882; RAB45	BC030882; RAB45
Mus musculus	RefSeq	ILMN_235059	ILMN_235059	RASEF	NM_001017427.1	NM_001017427.1		242505	62945395	NM_001017427.1	Rasef	NP_001017427.1	ILMN_2950343	000830010	S	4269	CAGACGTTCTGCCTGGGGTTTTGCCTCTAGTTGAGGGGCCAGAACAGCTG	4	-	73361347-73361396	4qC3	Mus musculus RAS and EF hand domain containing (Rasef), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	BC030882; RAB45	BC030882; RAB45
Mus musculus	RefSeq	ILMN_198201	ILMN_227440	LOC638685	XM_975775.1	XM_975775.1		638685	94403973	XM_975775.1	LOC638685	XP_980869.1	ILMN_1230141	006620746	S	200	TGTACGGACCACTGAAGCCCCTGTTCCAGACTTCGCACCTGGACAACTTG					PREDICTED: Mus musculus similar to Myb-related protein B (B-Myb) (LOC638685), mRNA.					
Mus musculus	RefSeq	ILMN_186842	ILMN_210908	MYT1L	NM_008666.3	NM_008666.3		17933	148271074	NM_008666.3	Myt1l	NP_032692.2	ILMN_1221763	003850753	S	6846	CATGTTAGAATGCTGACCTTCCACATGGGGTTATTGTGAGTCATCAGAGC				12qA2	Mus musculus myelin transcription factor 1-like (Myt1l), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	mKIAA1106; 2900046C06Rik; Nztf1; 2900093J19Rik; C630034G21Rik; Pmng1; Png-1	mKIAA1106; 2900046C06Rik; Nztf1; 2900093J19Rik; C630034G21Rik; Pmng1; Png-1
Mus musculus	RefSeq	ILMN_210908	ILMN_210908	MYT1L	NM_008666.3	NM_008666.3		17933	148271074	NM_008666.3	Myt1l	NP_032692.2	ILMN_2610424	004070176	S	3480	GGTGACCATCCCAAGCCCCAAACCCAAGTACCCTCAGTGCAAGGAAAGCA				12qA2	Mus musculus myelin transcription factor 1-like (Myt1l), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	mKIAA1106; 2900046C06Rik; Nztf1; 2900093J19Rik; C630034G21Rik; Pmng1; Png-1	mKIAA1106; 2900046C06Rik; Nztf1; 2900093J19Rik; C630034G21Rik; Pmng1; Png-1
Mus musculus	RefSeq	ILMN_210908	ILMN_210908	MYT1L	NM_008666.3	NM_008666.3		17933	148271074	NM_008666.3	Myt1l	NP_032692.2	ILMN_2627665	004060722	S	4403	GTCCAGAAAATAAAGCCCTACTGGAAAATATAAAGCAGGCTGTGAGAGGA				12qA2	Mus musculus myelin transcription factor 1-like (Myt1l), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	mKIAA1106; 2900046C06Rik; Nztf1; 2900093J19Rik; C630034G21Rik; Pmng1; Png-1	mKIAA1106; 2900046C06Rik; Nztf1; 2900093J19Rik; C630034G21Rik; Pmng1; Png-1
Mus musculus	RefSeq	ILMN_211484	ILMN_237723	INO80	NM_026574.3	NM_026574.3		68142	118129872	NM_026574.3	Ino80	NP_080850.2	ILMN_2648482	004880121	S	5706	TCACCACCCTCTTGCAGATGCCCCTTTGCCCATCCTGAATGCACAGCCTC	2	-	119199318-119199367	2qE5	Mus musculus INO80 homolog (S. cerevisiae) (Ino80), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Ino80; 4632409L19Rik; 2310079N15Rik	Ino80; 4632409L19Rik; 2310079N15Rik
Mus musculus	RefSeq	ILMN_222932	ILMN_222932	BCL9L	NM_030256.2	NM_030256.2		80288	91206399	NM_030256.2	Bcl9l	NP_084532.2	ILMN_3125747	002370768	A	4695	TCTAGCAGGCCCCTCGGTCTGGGGCTGGGGAAACTGAAAATATGTTAACT	9	+	44317862-44317866:44317867-44317911	9qA5.2	Mus musculus B-cell CLL/lymphoma 9-like (Bcl9l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B9L; MGC7014; DLNB11; BC003321; BCL9-2	B9L; MGC7014; DLNB11; BC003321; BCL9-2
Mus musculus	RefSeq	ILMN_249797	ILMN_249797	ZFP606	NM_001039951.1	NM_001039951.1		67370	90265806	NM_001039951.1	Zfp606	NP_001035040.1	ILMN_3135284	002680021	A	180	ACATGGAGGGAAGCGCTGAGGAGGACGGAAGAAAGACAGGTGGGCTCCCA	7	+	13066311-13066360	7qA1	Mus musculus zinc finger protein 606 (Zfp606), transcript variant 2, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AW494727; 2410022M24Rik	AW494727; 2410022M24Rik
Mus musculus	RefSeq	ILMN_198133	ILMN_237514	SSTR5	NM_011425.2	NM_011425.2		20609	141803431	NM_011425.2	Sstr5	NP_035555.1	ILMN_1232317	003870152	S	1279	ACGTAGAGGATACGGTGTGGAGGATGCAGATGCCATAGAGCCACGGCCAG	17	-	25628189-25628238	17qA3.3	Mus musculus somatostatin receptor 5 (Sstr5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [evidence IEA]	sst5; Smstr5	sst5; Smstr5
Mus musculus	RefSeq	ILMN_212389	ILMN_212389	SEPT6	NM_019942.4	NM_019942.4		56526	146135020	NM_019942.4	Sept6	NP_064326.2	ILMN_2663914	000630152	S	1196	GAGGATAAGAAGAAATGTCTGGATGAGGAAATGAACGCCTTCAAGCAGAG				XqA3.3	Mus musculus septin 6 (Sept6), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810035H17Rik; C920001C06Rik; Sep6; mKIAA0128; KIAA0128	2810035H17Rik; C920001C06Rik; Sep6; mKIAA0128; KIAA0128
Mus musculus	RefSeq	ILMN_212389	ILMN_212389	SEPT6	NM_019942.4	NM_019942.4		56526	146135020	NM_019942.4	Sept6	NP_064326.2	ILMN_2625867	002340519	S	2206	GCTCAAAGGTGTGATCAGTCACTGCTCCTCCGGGGCTTCCATTCTCCAGA				XqA3.3	Mus musculus septin 6 (Sept6), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810035H17Rik; C920001C06Rik; Sep6; mKIAA0128; KIAA0128	2810035H17Rik; C920001C06Rik; Sep6; mKIAA0128; KIAA0128
Mus musculus	RefSeq	ILMN_209734	ILMN_209734	DNAJA1	NM_008298.4	NM_008298.4		15502	146149100	NM_008298.4	Dnaja1	NP_032324.1	ILMN_1229424	005690671	S	2957	TTGTATATATAGCCTTAAACACGAAGGTCTAATAGCGGGTAGAATTGTAT				4qA5	Mus musculus DnaJ (Hsp40) homolog, subfamily A, member 1 (Dnaja1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence ISO]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Nedd7; Hsj2	Nedd7; Hsj2
Mus musculus	RefSeq	ILMN_192272	ILMN_247455	ADARB1	NM_001024838.1	NM_001024838.1		110532	67763819	NM_001024838.1	Adarb1	NP_001020009.1	ILMN_1243711	005310369	S	2838	CGCCACACATTTCCCCTCTTGAGCTACCCAGTGACCGCTTTATATCTCAG	10	-	76757213-76757262	10qC1	Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence ISS]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence ISS]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]	1700057H01Rik; D10Bwg0447e; AW558573; ADAR2; AW124433; BB220382; RED1	1700057H01Rik; D10Bwg0447e; AW558573; ADAR2; AW124433; BB220382; RED1
Mus musculus	RefSeq	ILMN_247455	ILMN_247455	ADARB1	NM_001024838.1	NM_001024838.1		110532	67763819	NM_001024838.1	Adarb1	NP_001020009.1	ILMN_3036678	006520458	I	424	CCACCTATCTAGAGTTTTCATCCCTCATTATCATCATGGGACCATCATTT	10	-	76788386-76788435	10qC1	Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence ISS]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence ISS]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]	1700057H01Rik; D10Bwg0447e; AW558573; ADAR2; AW124433; BB220382; RED1	1700057H01Rik; D10Bwg0447e; AW558573; ADAR2; AW124433; BB220382; RED1
Mus musculus	Riken	ILMN_202565	ILMN_202565	2610302F08RIK	ri|2610302F08|ZX00062A01|AK011964|2238					AK011964	2610302F08Rik		ILMN_1216794	002900161	S	1287	GTGCTCGCTCATCCATGGCCTCACCACCAGAGACAGTGTTCAAATGCTAG										
Mus musculus	RefSeq	ILMN_220020	ILMN_220020	9430073N08RIK	XM_125627.6	XM_125627.6		77296	149260731	XM_125627.6	9430073N08Rik	XP_125627.3	ILMN_1226398	000020324	S	504	GGCAAAGAAAGCTAAGTGGCGTGAAGAAGCTGCATTGGCTGCACAGTCCA	10	-	51305308-51305357	10qB3	PREDICTED: Mus musculus RIKEN cDNA 9430073N08 gene (9430073N08Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_202864	ILMN_202864	3632432H19RIK	ri|3632432H19|PX00010H05|AK028324|4003					AK028324	3632432H19Rik		ILMN_1241216	004070563	S	1508	GCAAGACTTTTCTACAGAACTAAAGGGCAGCTTCATGACTTCTGGGTGCC										
Mus musculus	Riken	ILMN_204839	ILMN_204839	A130021C14RIK	ri|A130021C14|PX00122A05|AK037486|2077					AK037486	A130021C14Rik		ILMN_1252578	005550634	S	882	GCGGAGCTGCTGCCCCCCTTCGTTCCCAAGAACATACTCACGGCAGTGGA										
Mus musculus	RefSeq	ILMN_222282	ILMN_222282	WDR85	NM_026044.2	NM_026044.2		67228	142369415	NM_026044.2	Wdr85	NP_080320.1	ILMN_1221636	006590678	S	2472	CAAGAGTCCCATTTTGATTGTCTTATCTGGAGAGAGCATTGGAATGTGTC	2	+	24828534-24828583	2qA3	Mus musculus WD40 repeat domain 85 (Wdr85), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]			2810443J12Rik; AW060693; RP23-226M2.2	2810443J12Rik; AW060693; RP23-226M2.2
Mus musculus	RefSeq	ILMN_185136	ILMN_222282	WDR85	NM_026044.2	NM_026044.2		67228	142369415	NM_026044.2	Wdr85	NP_080320.1	ILMN_2424475	003370446	S	2526	GGTTAGACACATTCCAATGCTCTCTCCAGATAAGACAATCAAAATGGGAC	2	+	24828588-24828637	2qA3	Mus musculus WD40 repeat domain 85 (Wdr85), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]			2810443J12Rik; AW060693; RP23-226M2.2	2810443J12Rik; AW060693; RP23-226M2.2
Mus musculus	RefSeq	ILMN_211595	ILMN_211595	CATSPER1	NM_139301.2	NM_139301.2		225865	118129998	NM_139301.2	Catsper1	NP_647462.1	ILMN_2617459	006180626	S	1862	CCGAGGAGGCCTTGAAGATGCAGCTTATTGAGGGAATGTTTGGCAACATG	19	+	5341453-5341502	19qA	Mus musculus cation channel, sperm associated 1 (Catsper1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel [goid 51925] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Cell motility due to movement of cilia or flagella [goid 1539] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]	Catsper; KSper	Catsper; KSper
Mus musculus	RefSeq	ILMN_218853	ILMN_218853	GIPC2	NM_016867.1	NM_016867.1		54120	8394257	NM_016867.1	Gipc2	NP_058563.1	ILMN_2798138	006770626	S	950	GGAAGATGATGGCGTGGCCCGTGTTCCTGCAGAGATGACCACAGTTCTGC	3	-	151757069-151757110:151757111-151757118	3qH3	Mus musculus GIPC PDZ domain containing family, member 2 (Gipc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2200002N01Rik; Semcap2; AU021850	2200002N01Rik; Semcap2; AU021850
Mus musculus	RefSeq	ILMN_201302	ILMN_317229	LOC100042621	XM_001478512.1	XM_001478512.1		100042621	149265600	XM_001478512.1	LOC100042621	XP_001478562.1	ILMN_1240819	004120154	S	155	GGTACCCAGCTCTGTTCTGGTATGTGCAGTATCCCGGAGAAGGTCCACAG	14	+	53938764-53938813	14qC2	PREDICTED: Mus musculus similar to T-cell receptor alpha chain V region (LOC100042621), mRNA.					
Mus musculus	RefSeq	ILMN_222517	ILMN_222517	PCNX	NM_018814.3	NM_018814.3		54604	93004082	NM_018814.3	Pcnx	NP_061284.2	ILMN_2750767	000070669	S	8112	GCGAAGGCCAGCACCAGCTGCCCTGTCACGGCTCCCGTGTGCCACGCTTC	12	+	83097884-83097933	12qD1	Mus musculus pecanex homolog (Drosophila) (Pcnx), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2900024E21Rik; AI327143; AF096286; Pcnxl1; 3526401J03Rik; AI413187	2900024E21Rik; AI327143; AF096286; Pcnxl1; 3526401J03Rik; AI413187
Mus musculus	RefSeq	ILMN_196966	ILMN_222517	PCNX	NM_018814.3	NM_018814.3		54604	93004082	NM_018814.3	Pcnx	NP_061284.2	ILMN_1226252	005310603	S	1160	CTTATAGGAAGGAGCACCGACCACGAGGAGTGCCACGGACTTCCAGCTCT	12	+	83018865-83018914	12qD1	Mus musculus pecanex homolog (Drosophila) (Pcnx), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2900024E21Rik; AI327143; AF096286; Pcnxl1; 3526401J03Rik; AI413187	2900024E21Rik; AI327143; AF096286; Pcnxl1; 3526401J03Rik; AI413187
Mus musculus	RefSeq	ILMN_220108	ILMN_220108	KCNJ2	NM_008425.2	NM_008425.2		16518	31543035	NM_008425.2	Kcnj2	NP_032451.1	ILMN_2875048	003360066	S	3795	TGCTGGGTTGGGGACAGGGAGAAGTCACAGGAGAGAACACAGACTGGCTT	11	+	110891262-110891311	11qE2	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 2 (Kcnj2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]	IRK1; Kir2.1; Kcnf1	IRK1; Kir2.1; Kcnf1
Mus musculus	RefSeq	ILMN_210855	ILMN_210855	FGFR2	NM_201601.2	NM_201601.2		14183	116089354	NM_201601.2	Fgfr2	NP_963895.2	ILMN_2609887	004890674	S	3347	GAGTGAATGTGTCTTCCTGTCCCCAAACAGGACAGCACCAGGAACCTACT	7	-	137307424-137307472:137307473-137307473	7qF3	Mus musculus fibroblast growth factor receptor 2 (Fgfr2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a mesenchymal cell [goid 48762] [evidence IGI]; Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48562] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IDA]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Fgfr-7; Bek; KGFRTr; AW556123; MGC102519; svs; Fgfr7; Fgfr-2; AU043015	Fgfr-7; Bek; KGFRTr; AW556123; MGC102519; svs; Fgfr7; Fgfr-2; AU043015
Mus musculus	RefSeq	ILMN_188003	ILMN_210855	FGFR2	NM_201601.2	NM_201601.2		14183	116089354	NM_201601.2	Fgfr2	NP_963895.2	ILMN_1225071	006060452	S	4666	TTGCTTTGGATACGCCCACTCACTTTGCTACAGTCATGCGACATGTATGC	7	-	137306105-137306154	7qF3	Mus musculus fibroblast growth factor receptor 2 (Fgfr2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a mesenchymal cell [goid 48762] [evidence IGI]; Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48562] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IDA]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Fgfr-7; Bek; KGFRTr; AW556123; MGC102519; svs; Fgfr7; Fgfr-2; AU043015	Fgfr-7; Bek; KGFRTr; AW556123; MGC102519; svs; Fgfr7; Fgfr-2; AU043015
Mus musculus	RefSeq	ILMN_210855	ILMN_210855	FGFR2	NM_201601.2	NM_201601.2		14183	116089354	NM_201601.2	Fgfr2	NP_963895.2	ILMN_2646078	004060167	S	1839	CAATGCAGAAGTGCTGGCTCTGTTCAATGTGACGGAGATGGATGCTGGGG	7	-	137343349-137343398	7qF3	Mus musculus fibroblast growth factor receptor 2 (Fgfr2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a mesenchymal cell [goid 48762] [evidence IGI]; Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48562] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IDA]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Fgfr-7; Bek; KGFRTr; AW556123; MGC102519; svs; Fgfr7; Fgfr-2; AU043015	Fgfr-7; Bek; KGFRTr; AW556123; MGC102519; svs; Fgfr7; Fgfr-2; AU043015
Mus musculus	RefSeq	ILMN_237850	ILMN_237850	OLFR1140	NM_146642.1	NM_146642.1		258635	33239173	NM_146642.1	Olfr1140	NP_666853.1	ILMN_2875611	000430437	S	714	CTCCACTTGTGCCTCCCACCTGACTGCAGTTGCAATTTTTCAGGGAACTC	2	+	87587068-87587117	2qD	Mus musculus olfactory receptor 1140 (Olfr1140), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR177-6	MOR177-6
Mus musculus	RefSeq	ILMN_189241	ILMN_256616	TNPO1	NM_001048267.1	NM_001048267.1		238799	115385965	NM_001048267.1	Tnpo1	NP_001041732.1	ILMN_2459550	002490593	S	4446	ACTGTGAATGTGAAGACCCTAACTGGTACACTTGATCTTATGTCCATATG	13	-	99612925-99612974	13qD1	Mus musculus transportin 1 (Tnpo1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	TRN; IPO2; MIP; MIP1; AU021749; D13Ertd688e; Kpnb2	TRN; IPO2; MIP; MIP1; AU021749; D13Ertd688e; Kpnb2
Mus musculus	RefSeq	ILMN_245991	ILMN_245991	SLC14A2	NM_207651.2	NM_207651.2		27411	46849766	NM_207651.2	Slc14a2	NP_997534.1	ILMN_3128363	001240091	A	1734	ACAAGCTCCCACTCAGCAAAGTCACCTACCCGGAGGCCAACCGCATCTAC	18	-	78380242-78380291	18qE3	Mus musculus solute carrier family 14 (urea transporter), member 2 (Slc14a2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]		Enables the directed movement of urea cross a membrane into, out of, within or between cells. Urea is the water soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle. It is the main nitrogen-containing (urinary) excretion product in ureotelic animals [goid 15204] [evidence IDA]	UT-A3; UT-A5	UT-A3; UT-A5
Mus musculus	RefSeq	ILMN_245991	ILMN_245991	SLC14A2	NM_207651.2	NM_207651.2		27411	46849766	NM_207651.2	Slc14a2	NP_997534.1	ILMN_3051931	004780075	I	3844	GATGCTCTCCAGACCTGGGACACCTGAATCATTGAAAATGCCAGTGCACC	18	-	78343026-78343075	18qE3	Mus musculus solute carrier family 14 (urea transporter), member 2 (Slc14a2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]		Enables the directed movement of urea cross a membrane into, out of, within or between cells. Urea is the water soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle. It is the main nitrogen-containing (urinary) excretion product in ureotelic animals [goid 15204] [evidence IDA]	UT-A3; UT-A5	UT-A3; UT-A5
Mus musculus	MEEBO	ILMN_188384	ILMN_188384	AI987712	scl48088.1_576				31342277	NM_178921	AI987712		ILMN_1212714	007000707	S	2095	GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATA										
Mus musculus	MEEBO	ILMN_188384	ILMN_188384	AI987712	scl48088.1_576				31342277	NM_178921	AI987712		ILMN_2452226	006220132	S	4	GTCTCCATCCACTTTGTAGGGACAACATGGACAGTTAAATCTTTGTCAGT										
Mus musculus	RefSeq	ILMN_214866	ILMN_214866	ODZ1	NM_011855.3	NM_011855.3		23963	118130019	NM_011855.3	Odz1	NP_035985.2	ILMN_2652845	001070477	S	8023	CGACTGTCGAAGAGGAGAAGAACCACGTGTTGGAGATGGCCAGACAGCGC	X	-	39897439-39897442:39908821-39908866	XqA4	Mus musculus odd Oz/ten-m homolog 1 (Drosophila) (Odz1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		Ten-m1; Odz2; TCAP-1	Ten-m1; Odz2; TCAP-1
Mus musculus	RefSeq	ILMN_206632	ILMN_326181	7030419G21RIK	XM_001474569.1	XM_001474569.1		434378	149259488	XM_001474569.1	7030419G21Rik	XP_001474619.1	ILMN_1251132	002450471	S	1949	GTAGGCATTTGGAGTCGGGAGCGTTGCAGGTATGGCTTGGGCAGAATCCC				9qA3	PREDICTED: Mus musculus RIKEN cDNA 7030419G21 gene (7030419G21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_191066	ILMN_236736	AI851790	NM_182807.2	NM_182807.2		268354	54607132	NM_182807.2	AI851790	NP_877959.2	ILMN_2475795	004890497	S	3676	GGGTCGCACAGTAACTAGGACCTTTGGTGGGAAGAACAGCTAAAAGTGCA	10	+	123177572-123177621	10qD2	Mus musculus expressed sequence AI851790 (AI851790), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			FAM19A2 TAFA-2; TAFA2; Tafa-2; 6330575M02	FAM19A2 TAFA-2; TAFA2; Tafa-2; 6330575M02
Mus musculus	RefSeq	ILMN_191066	ILMN_236736	AI851790	NM_182807.2	NM_182807.2		268354	54607132	NM_182807.2	AI851790	NP_877959.2	ILMN_1216550	002100477	S	2102	GGCTGGGTTCATGGAGACACAAGAATAGAAACTGGACTCCTGCCGTGACC	10	+	123175998-123176047	10qD2	Mus musculus expressed sequence AI851790 (AI851790), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			FAM19A2 TAFA-2; TAFA2; Tafa-2; 6330575M02	FAM19A2 TAFA-2; TAFA2; Tafa-2; 6330575M02
Mus musculus	RefSeq	ILMN_196404	ILMN_196404	4932408F19	XM_136806.3	XM_136806.3			38050348	XM_136806.3	4932408F19		ILMN_2524005	000870673	S	4203	AGGCAGACTTGGTAATCTGGATCTAGCAGCACGGTGTCGAAAGCTGCCCG										
Mus musculus	RefSeq	ILMN_210091	ILMN_210091	DGAT1	NM_010046.2	NM_010046.2		13350	31981804	NM_010046.2	Dgat1	NP_034176.1	ILMN_2807284	004150592	S	1530	TCTGAGCTACTGCCAAAGGCCAGCCCTCCCTAACCTGGGCCTGGAGTTCT	15	-	76332620-76332665:76332666-76332669	15qD3	Mus musculus diacylglycerol O-acyltransferase 1 (Dgat1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol [goid 3846] [evidence IDA]; Catalysis of the reaction: acyl-CoA + 1,2-diacylglycerol = CoA + triacylglycerol [goid 4144] [evidence IEA]	D15Ertd23e; C75990; Dgat	D15Ertd23e; C75990; Dgat
Mus musculus	RefSeq	ILMN_212383	ILMN_212383	CTDSP1	NM_153088.1	NM_153088.1		227292	23346508	NM_153088.1	Ctdsp1	NP_694728.1	ILMN_1213307	005310037	S	2059	CCACCAGCTTAGTGGGAGGGGGTTGTCTCTGCTTCATTTTTAGGTGCCTC	1	+	74443132-74443181	1qC3	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 (Ctdsp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	NLIIF; Nif3; GIP; SCP1	NLIIF; Nif3; GIP; SCP1
Mus musculus	RefSeq	ILMN_212383	ILMN_212383	CTDSP1	NM_153088.1	NM_153088.1		227292	23346508	NM_153088.1	Ctdsp1	NP_694728.1	ILMN_2714397	004730370	S	1652	CACTTGTAAAAGAGCTGGGGACCTTCCTCGGGAGGAACGCTCCCTGTCCA	1	+	74442725-74442774	1qC3	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 (Ctdsp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	NLIIF; Nif3; GIP; SCP1	NLIIF; Nif3; GIP; SCP1
Mus musculus	RefSeq	ILMN_212383	ILMN_212383	CTDSP1	NM_153088.1	NM_153088.1		227292	23346508	NM_153088.1	Ctdsp1	NP_694728.1	ILMN_3130055	006620377	A	2589	TTCATAACCCTGCTGGACAGGAGGAAGTTAGCCAAGAGGGACTGCCTGGG	1	+	74443662-74443711	1qC3	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 (Ctdsp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	NLIIF; Nif3; GIP; SCP1	NLIIF; Nif3; GIP; SCP1
Mus musculus	RefSeq	ILMN_214454	ILMN_214454	SFN	NM_018754.1	NM_018754.1		55948	9055337	NM_018754.1	Sfn	NP_061224.1	ILMN_2648169	000160639	S	667	CGCCTGGGCCTGGCCCTGAACTTTTCAGTCTTCCACTACGAGATAGCCAA	4	-	132873168-132873217	4qD2.3	Mus musculus stratifin (Sfn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence IDA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IGI]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IEA]	Ywhas; Er; Mme1	Ywhas; Er; Mme1
Mus musculus	RefSeq	ILMN_214454	ILMN_214454	SFN	NM_018754.1	NM_018754.1		55948	9055337	NM_018754.1	Sfn	NP_061224.1	ILMN_2867084	007150341	S	1013	TCAGCAACACCTTGGGAAGGTCTTTCGAAGGGGGCGCAGCCAAGCTGAAG	4	-	132872822-132872871	4qD2.3	Mus musculus stratifin (Sfn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence IDA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IGI]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IEA]	Ywhas; Er; Mme1	Ywhas; Er; Mme1
Mus musculus	RefSeq	ILMN_197709	ILMN_197709	LOC239434	XM_139543.2	XM_139543.2			38077505	XM_139543.2	LOC239434		ILMN_2529091	002810181	S	833	ATCCCCACCACACTATTGATGGCTCTCGCTGTGAAGCCTGGAGAAAGTGC										
Mus musculus	RefSeq	ILMN_215639	ILMN_215639	INPP5B	NM_008385.3	NM_008385.3		16330	30231212	NM_008385.3	Inpp5b	NP_032411.3	ILMN_1236911	005220373	S	3305	GAACTGACGTTCCACATTCAACTCTAGTTATTTAACACAAATAGCTCCCT	4	+	124478279-124478328	4qD2.2	Mus musculus inositol polyphosphate-5-phosphatase B (Inpp5b), nuclear gene encoding mitochondrial protein, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [evidence ISA]	INPP5P; AW260155; 75kDa	INPP5P; AW260155; 75kDa
Mus musculus	Riken	ILMN_201874	ILMN_201874	4921514L11RIK	ri|4921514L11|PX00014C14|AK014897|1471					AK014897	4921514L11Rik		ILMN_1225171	001580598	S	1158	CTATCTGAAATCTCCGGAGTGAAGTCTAACTGGCTCAAAGTGAACCCCAG										
Mus musculus	RefSeq	ILMN_214103	ILMN_214103	OLFR1440	NM_146684.1	NM_146684.1		258679	33239083	NM_146684.1	Olfr1440	NP_666895.1	ILMN_1243205	005860376	S	645	CCTGATATCCTATGGTTATATCATTGGCACAATCCTGAATATCAGCTCAG	19	+	12469399-12469448	19qA	Mus musculus olfactory receptor 1440 (Olfr1440), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR215-1	MOR215-1
Mus musculus	RefSeq	ILMN_197168	ILMN_258677	LOC193403	XR_002380.1	XR_002380.1		193403	94395932	XR_002380.1	LOC193403		ILMN_1258669	006450025	S	1008	GTGATGATGGGTGTACCACCAATTCCCCACACCTTCCTTGCTGACTGCCC				13qA3.3	PREDICTED: Mus musculus similar to serine proteinase inhibitor member 6C (LOC193403), mRNA.					
Mus musculus	RefSeq	ILMN_196461	ILMN_261871	TRSPAP1	NM_027925.3	NM_027925.3		71787	110835713	NM_027925.3	Trspap1	NP_082201.2	ILMN_1237264	005550592	S	591	CACAGATGAGTTGGAACAGAAGCGAGCCTTGACGGAGTGCCAGGGAGCAG	4	-	131875418-131875467	4qD2.3	Mus musculus tRNA selenocysteine associated protein 1 (Trspap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	1110007F05Rik; AA387999; WI1-2643G14.2; Secp43	1110007F05Rik; AA387999; WI1-2643G14.2; Secp43
Mus musculus	RefSeq	ILMN_191239	ILMN_238047	GM566	XR_005162.1	XR_005162.1		229672	94370233	XR_005162.1	Gm566		ILMN_1257368	003800746	S	230	GTTGGCCGCCTTCGAATACTGGGTGATCAGTTCAATGGAGAGCTGGAAGC				3qF2.2	PREDICTED: Mus musculus gene model 566, (NCBI), transcript variant 2 (Gm566), misc RNA.					
Mus musculus	RefSeq	ILMN_217421	ILMN_217421	EXOSC10	NM_016699.1	NM_016699.1		50912	7710081	NM_016699.1	Exosc10	NP_057908.1	ILMN_1258931	000010113	S	2363	GCCACCAGTGACCTGAGGACTATAGAGCAAAAACAGGAGAAGAAACGACT	4|NT_039289.1	+	67532-67581	4qE2	Mus musculus exosome component 10 (Exosc10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Complex of 3'-5' exoribonucleases found in the nucleus [goid 176] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	PM-Scl; Pmscl2; PM/Scl-100; RRP6; p4; p2; p3	PM-Scl; Pmscl2; PM/Scl-100; RRP6; p4; p2; p3
Mus musculus	RefSeq	ILMN_217421	ILMN_217421	EXOSC10	NM_016699.1	NM_016699.1		50912	7710081	NM_016699.1	Exosc10	NP_057908.1	ILMN_1242419	006060639	S	2095	CCTGCCTTCTCTGGAACACAAGGCCCACATCTCTCAAGCAGCAAAGTTTG	4|NT_039289.1	+	63251-63300	4qE2	Mus musculus exosome component 10 (Exosc10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Complex of 3'-5' exoribonucleases found in the nucleus [goid 176] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	PM-Scl; Pmscl2; PM/Scl-100; RRP6; p4; p2; p3	PM-Scl; Pmscl2; PM/Scl-100; RRP6; p4; p2; p3
Mus musculus	RefSeq	ILMN_223625	ILMN_223625	NSG2	NM_008741.1	NM_008741.1		18197	6679141	NM_008741.1	Nsg2	NP_032767.1	ILMN_1220739	005720719	S	1908	GCATAGGCCGTTTAAGGGTATTTTTTTGTGGCTTGCTATATTGCTGAAAT	11	+	31958867-31958916	11qA4	Mus musculus neuron specific gene family member 2 (Nsg2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IEA]	Interacting selectively with a dopamine receptor [goid 50780] [evidence IEA]	R75287; AA989750; 8.5	R75287; AA989750; 8.5
Mus musculus	RefSeq	ILMN_223625	ILMN_223625	NSG2	NM_008741.1	NM_008741.1		18197	6679141	NM_008741.1	Nsg2	NP_032767.1	ILMN_2890515	002710341	S	1878	GAACTGGCCAGGGGAATTGCCCATTTGGTCTGCATAGGCCGTTTAAGGGT	11	+	31958837-31958886	11qA4	Mus musculus neuron specific gene family member 2 (Nsg2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IEA]	Interacting selectively with a dopamine receptor [goid 50780] [evidence IEA]	R75287; AA989750; 8.5	R75287; AA989750; 8.5
Mus musculus	RefSeq	ILMN_234919	ILMN_234919	OTTMUSG00000000421	NM_001039115.1	NM_001039115.1		544922	84993749	NM_001039115.1	OTTMUSG00000000421	NP_001034204.1	ILMN_2824954	006220474	S	1974	GTCAGATTCCTGCGGTCTTAGCTACCCTATTGTGCCTTGTGCATGGGTGC	13	+	21576950-21576999	13qA3.1	Mus musculus predicted gene, OTTMUSG00000000421 (OTTMUSG00000000421), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185863	ILMN_257306	WFDC5	NM_145369.2	NM_145369.2		209232	70778836	NM_145369.2	Wfdc5	NP_663344.2	ILMN_1225607	007210554	S	942	CCTGCAGAGCCACCCCGTAATGTGTAAAGTTGTGTGAAGTACCTCTGTAC	2	-	164003392-164003441	2qH3	Mus musculus WAP four-disulfide core domain 5 (Wfdc5), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	WAP1; BC019734; PRG5	WAP1; BC019734; PRG5
Mus musculus	RefSeq	ILMN_193858	ILMN_255382	NDUFB8	NM_026061.2	NM_026061.2		67264	133892869	NM_026061.2	Ndufb8	NP_080337.1	ILMN_2621966	007210156	S	572	CTGAGGAGGCTTGATGGGCTTTTTGCCCTCGTTCCTAGAGGCTTAACCAT	19	-	44624763-44624809:44624810-44624812	19qC3	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 (Ndufb8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	2900010I05Rik; AI987932	2900010I05Rik; AI987932
Mus musculus	RefSeq	ILMN_222976	ILMN_251875	TEKT3	NM_027660.1	NM_027660.1		71062	62078758	NM_027660.1	Tekt3	NP_081936.1	ILMN_2757547	001770564	S	1341	CCCGGCTGGATGAGAGAACGAGGAGGCCAAACGTAGAGCTGTGCAGGGAT	11	+	62900800-62900849	11qB3	Mus musculus tektin 3 (Tekt3), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	4933407G07Rik; RP23-172P19.3	4933407G07Rik; RP23-172P19.3
Mus musculus	RefSeq	ILMN_217818	ILMN_217818	DNAJA2	NM_019794.1	NM_019794.1		56445	9789936	NM_019794.1	Dnaja2	NP_062768.1	ILMN_3003324	002190154	S	2562	TGTATCATACCATCTCTGAGCCTAATAGCACTAGAGTACATTTCTAGAGC	8	-	88427972-88428021	8qC3	Mus musculus DnaJ (Hsp40) homolog, subfamily A, member 2 (Dnaja2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	DNAJ; Dnaj3; 1500017M13Rik; DNJ3; HIRIP4; 2010206B19Rik; PRO3015; mDj3	DNAJ; Dnaj3; 1500017M13Rik; DNJ3; HIRIP4; 2010206B19Rik; PRO3015; mDj3
Mus musculus	Riken	ILMN_205288	ILMN_205288	PLP-E	ri|3830429G09|PX00313G07|AK028371|1284					AK028371	PLP-E		ILMN_1240343	006770735	S	1192	CCCTAACACCTTATCTAACAAAATCTGGCTCTCCTGCTCCATTTTTCTCC										
Mus musculus	RefSeq	ILMN_225790	ILMN_225790	NR1H2	NM_009473.2	NM_009473.2		22260	118130379	NM_009473.2	Nr1h2	NP_033499.1	ILMN_3014084	005700142	I	1760	CACCCATTGAGTCTTCCAAGAGTGGTGAGGGTCACAGGTCCTAGCCTCTG	7	-	51805156-51805205	7qB4	Mus musculus nuclear receptor subfamily 1, group H, member 2 (Nr1h2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]	UR; OR-1; RIP15; Unr2; LXRB; AI194859; LXRbeta; Unr; NER1	UR; OR-1; RIP15; Unr2; LXRB; AI194859; LXRbeta; Unr; NER1
Mus musculus	RefSeq	ILMN_225790	ILMN_225790	NR1H2	NM_009473.2	NM_009473.2		22260	118130379	NM_009473.2	Nr1h2	NP_033499.1	ILMN_3085126	000670528	A	1447	AGGATCAAGCGCCCACAGGACCAGCTCCGCTTCCCACGCATGCTCATGAA	7	-	51805469-51805501:51805670-51805686	7qB4	Mus musculus nuclear receptor subfamily 1, group H, member 2 (Nr1h2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]	UR; OR-1; RIP15; Unr2; LXRB; AI194859; LXRbeta; Unr; NER1	UR; OR-1; RIP15; Unr2; LXRB; AI194859; LXRbeta; Unr; NER1
Mus musculus	RefSeq	ILMN_249246	ILMN_249246	OLFR750	NM_207558.1	NM_207558.1		404319	46430567	NM_207558.1	Olfr750	NP_997441.1	ILMN_2884217	001230682	S	570	GGCATGTACCAACACCACGAGACTGGAGGAGGCTGACTTTGTCTTGGCCT	14	-	51690447-51690496	14qC1	Mus musculus olfactory receptor 750 (Olfr750), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR103-18	MOR103-18
Mus musculus	MEEBO	ILMN_189381	ILMN_189381	C79267	scl24771.1.2036_227				34147164	NM_183148	C79267		ILMN_1226546	003180246	S	1	CCGGGAGGGGTTTGTACTCATCAAAGACTACTGACCCTACCAGAAAACCA										
Mus musculus	RefSeq	ILMN_214356	ILMN_214356	PET112L	NM_144896.2	NM_144896.2		229487	31981732	NM_144896.2	Pet112l	NP_659145.1	ILMN_2901655	004610300	S	2082	GGAGTGTGGTGTGTTCAGACCTAAACACGGGCTGGTGAAGATGTAAACAG	3	+	85740172-85740221	3qF1	Mus musculus PET112-like (yeast) (Pet112l), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]	9430026F02Rik; MGC11629	9430026F02Rik; MGC11629
Mus musculus	RefSeq	ILMN_220360	ILMN_220360	H2-M9	NM_008205.1	NM_008205.1		14997	6680148	NM_008205.1	H2-M9	NP_032231.1	ILMN_2987197	002100647	S	531	AAAGTCGTCAAAGTCTTTCCTGCTGGGTGCATGTGTGGAGGGGCTCCTTC	17	-	36840867-36840916	17qB1	Mus musculus histocompatibility 2, M region locus 9 (H2-M9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_221304	ILMN_221304	DSTN	NM_019771.1	NM_019771.1		56431	9790218	NM_019771.1	Dstn	NP_062745.1	ILMN_2733695	002100170	S	905	CCGTGTATTTTGACCAAAGTTCTCTATTTTTCCTTGACTAAAACAAGATA	2	+	143768345-143768394	2qG1	Mus musculus destrin (Dstn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of actin depolymerization [goid 30836] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	2610043P17Rik; AU042046; Dsn; sid23p; ADF; corn1	2610043P17Rik; AU042046; Dsn; sid23p; ADF; corn1
Mus musculus	RefSeq	ILMN_221304	ILMN_221304	DSTN	NM_019771.1	NM_019771.1		56431	9790218	NM_019771.1	Dstn	NP_062745.1	ILMN_2801683	000430332	S	1195	GTCTTAGAAATCATGGTATATCCTCAGGAGAATGTTCCGTGTCTCGCAAC	2	+	143768635-143768684	2qG1	Mus musculus destrin (Dstn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of actin depolymerization [goid 30836] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	2610043P17Rik; AU042046; Dsn; sid23p; ADF; corn1	2610043P17Rik; AU042046; Dsn; sid23p; ADF; corn1
Mus musculus	RefSeq	ILMN_218353	ILMN_218353	OBP1A	NM_008754.2	NM_008754.2		18249	142347493	NM_008754.2	Obp1a	NP_032780.2	ILMN_2694682	002060358	S	597	GACCTTGAAATCAATATCATCTATAATTAACTTGTTCTTTCAAAACAACT	X	-	75330954-75331003	XqA7.3	Mus musculus odorant binding protein Ia (Obp1a), mRNA.			Interacting selectively with an odorant, any substance capable of stimulating the sense of smell [goid 5549] [evidence IDA]	OBP-1a	OBP-1a
Mus musculus	RefSeq	ILMN_192578	ILMN_247121	SLC9A4	NM_177084.3	NM_177084.3		110895	142388918	NM_177084.3	Slc9a4	NP_796058.1	ILMN_2732249	005080497	S	2371	CATACACTCAAGAGCAGGGTCCCTTCAGGAAAGGCGACAGACCCAGGCAG	1	+	40686125-40686174	1qB	Mus musculus solute carrier family 9 (sodium/hydrogen exchanger), member 4 (Slc9a4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]	AW990558; NHE4; D730009J23Rik	AW990558; NHE4; D730009J23Rik
Mus musculus	RefSeq	ILMN_196894	ILMN_244144	GM889	NM_001033437.2	NM_001033437.2		380755	142371522	NM_001033437.2	Gm889	NP_001028609.1	ILMN_1259309	002370463	S	278	CAGGAAATGGAAGGCGGGGGCTGTTTTTTGTGGGGCTGCTCCTGGTGTTG	12	-	40907275-40907324	12qB1	Mus musculus gene model 889, (NCBI) (Gm889), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_205807	ILMN_205807	A130021K16RIK	ri|A130021K16|PX00122O24|AK037496|3116					AK037496	A130021K16Rik		ILMN_1251811	005810333	S	2632	GTAGTTACCAACCATGCACAAGGCCCAGAGTTTAGTCTGTCTTGGAACCA										
Mus musculus	RefSeq	ILMN_219734	ILMN_219734	KCNJ8	NM_008428.4	NM_008428.4		16523	145966749	NM_008428.4	Kcnj8	NP_032454.1	ILMN_1253409	004730050	S	2029	GCTGGGCAGCTGGGTAGCCTTTTATTCAGAGTCTGGGGCTTGAATTCATT				6qG2	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 8 (Kcnj8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 15272] [evidence IEA];  [goid 5242] [evidence IEA]	AI448900; Kir6.1	AI448900; Kir6.1
Mus musculus	RefSeq	ILMN_216888	ILMN_216888	CNTN4	NM_173004.2	NM_173004.2		269784	142382585	NM_173004.2	Cntn4	NP_766592.1	ILMN_2710524	006020471	S	195	GAGAATCAGATTCTTCATGCTCAGCTAAAGGAAACAATCCTCGTGGTTCT	6	+	105790490-105790539	6qE1	Mus musculus contactin 4 (Cntn4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BIG-2A; Axcam; 9630050B05	BIG-2A; Axcam; 9630050B05
Mus musculus	RefSeq	ILMN_216888	ILMN_216888	CNTN4	NM_173004.2	NM_173004.2		269784	142382585	NM_173004.2	Cntn4	NP_766592.1	ILMN_2676515	001230181	S	1268	GCAAGGAAAGCCAGAAGACATAAGTCGAATGGAATTCTGGAAATTCCCAA	6	+	106459408-106459457	6qE1	Mus musculus contactin 4 (Cntn4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BIG-2A; Axcam; 9630050B05	BIG-2A; Axcam; 9630050B05
Mus musculus	RefSeq	ILMN_242150	ILMN_242150	ZFP386	NM_019565.3	NM_019565.3		56220	93102383	NM_019565.3	Zfp386	NP_062511.2	ILMN_3142440	005860138	A	97	CCTTACGAAATCACGGGTGCTGGAGATGCAGGAGAGCCATGGAGATGGAG	12	+	117286031-117286068:117286069-117286077:117293190-117293192	12qF2	Mus musculus zinc finger protein 386 (Kruppel-like) (Zfp386), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	Kzf1; KIAA4205; mKIAA4205	Kzf1; KIAA4205; mKIAA4205
Mus musculus	RefSeq	ILMN_214761	ILMN_214761	GPR137	NM_207220.1	NM_207220.1		107173	46402190	NM_207220.1	Gpr137	NP_997103.1	ILMN_2780876	000870634	S	1581	CCCCCTAAAATGGAAACAAGGCCCCAGGATACCAGATGCCCACAGTGCCC	19	-	7012646-7012695	19qA	Mus musculus G protein-coupled receptor 137 (Gpr137), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AI428855	AI428855
Mus musculus	Riken	ILMN_202349	ILMN_202349	4930438D12RIK	ri|4930438D12|PX00031F14|AK015335|1239					AK015335	4930438D12Rik		ILMN_2548916	007150482	S	879	ATTTAGCTGGACTGGGCCTTGCAGGTTATGTTGAGGCCTTGGCGTCCAGG										
Mus musculus	MEEBO	ILMN_188367	ILMN_188367	IL6ST	scl44374.19_560				37591174	NM_010560	Il6st		ILMN_2452075	006480491	S	20	ATGGCATAAATTTAGACCTAGTAATCATAGGATGCCTCATTGTTATAGAC						The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that modulates the frequency, rate or extent of the Notch signaling pathway [goid 8593] [evidence IDA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with interleukin-11 [goid 19970] [evidence IDA]; Combining with interleukin-11 to initiate a change in cell activity [goid 4921] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_193237	ILMN_193237	1200008N06RIK	scl38723.2.1_303				51765727	XM_109598	1200008N06Rik		ILMN_1226193	004590253	S	6	CCTGGACTCTTAGATTAGGTACTCTTCCCGGCCCCTCACTCAGATAATGC										
Mus musculus	MEEBO	ILMN_185127	ILMN_185127	C530044C16RIK	scl30055.6_520						C530044C16Rik		ILMN_1248742	006060524	S	10	CATGGCTCCAAACCACCATAAGTATCCTGTGCACGTTGTCTGTCGTTGCC										
Mus musculus	RefSeq	ILMN_198775	ILMN_198775	LOC272665	XM_195413.2	XM_195413.2			38087484	XM_195413.2	LOC272665		ILMN_2532880	002760541	S	845	AGCAGCGTCAATTTAGTGGTTCGCCTATGGATGACGAGCTGCTGGCACAG										
Mus musculus	Riken	ILMN_206344	ILMN_206344	D330030G19RIK	ri|D330030G19|PX00192O24|AK084689|3560					AK084689	D330030G19Rik		ILMN_1239748	000630324	S	2700	GCAACCAGCACTGAACATTTGGGAGGTGGATGAGTGAATGTGTTCTGCCG										
Mus musculus	RefSeq	ILMN_213141	ILMN_213141	AK2	NM_016895.3	NM_016895.3		11637	118131139	NM_016895.3	Ak2	NP_058591.2	ILMN_1235909	000150709	S	1083	CTAAGAGACCTCAGCTTCTACATAAGAACCTCATGGATCCCCAGGCCCAG	4	+	128688165-128688214	4qD2.2	Mus musculus adenylate kinase 2 (Ak2), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate [goid 19201] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor) [goid 16776] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]	D4Ertd220e; Ak-2	D4Ertd220e; Ak-2
Mus musculus	RefSeq	ILMN_213141	ILMN_213141	AK2	NM_016895.3	NM_016895.3		11637	118131139	NM_016895.3	Ak2	NP_058591.2	ILMN_2660663	000780187	S	732	ACAGAAGGCCAGGCGAGACCGCACCCCTGCTCATCTCCCCGCCGTGGGAT	4	+	128687814-128687863	4qD2.2	Mus musculus adenylate kinase 2 (Ak2), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate [goid 19201] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor) [goid 16776] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]	D4Ertd220e; Ak-2	D4Ertd220e; Ak-2
Mus musculus	RefSeq	ILMN_217073	ILMN_310593	1810020O05RIK	XM_001478842.1	XM_001478842.1		613264	149255650	XM_001478842.1	1810020O05Rik	XP_001478892.1	ILMN_2678808	003120379	S	2929	TAAAGTAGAGTGGTGGCTTCTTATACAGGTCAAAATCCAGGTGGCGCTGG				6qD1	PREDICTED: Mus musculus Riken cDNA 1810020O05 gene (1810020O05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221016	ILMN_221016	LIAS	NM_024471.4	NM_024471.4		79464	146149226	NM_024471.4	Lias	NP_077791.1	ILMN_1250882	005690066	S	1352	CCGTTCTGAAGGGTCTGATGGCTGATCGAAGCGGAATGGTGTATACCTGT				5qC3.1	Mus musculus lipoic acid synthetase (Lias), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid [goid 9107] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipoic acid, 1,2-dithiolane-3-pentanoic acid, a coenzyme involved in oxidative decarboxylation of keto acids [goid 9105] [evidence IGI]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein N6-(octanoyl)lysine + 2 sulfur + 2 S-adenosyl-L-methionine = protein N6-(lipoyl)lysine + 2 L-methionine + 2 5'-deoxyadenosyl [goid 16992] [evidence IEA]; Catalysis of the reaction: octanoic acid + 2 S = lipoic acid + 2 H [goid 17140] [evidence IPI]	mLip1; C77512; MGC7254; 2900022L22Rik; 4933425M12Rik	mLip1; C77512; MGC7254; 2900022L22Rik; 4933425M12Rik
Mus musculus	RefSeq	ILMN_221016	ILMN_221016	LIAS	NM_024471.4	NM_024471.4		79464	146149226	NM_024471.4	Lias	NP_077791.1	ILMN_2743668	000870301	S	1120	TGGGAAAAAGTAGGGAATGAACTTGGATTTCTCTATACGGCAAGTGGTCC				5qC3.1	Mus musculus lipoic acid synthetase (Lias), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid [goid 9107] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipoic acid, 1,2-dithiolane-3-pentanoic acid, a coenzyme involved in oxidative decarboxylation of keto acids [goid 9105] [evidence IGI]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein N6-(octanoyl)lysine + 2 sulfur + 2 S-adenosyl-L-methionine = protein N6-(lipoyl)lysine + 2 L-methionine + 2 5'-deoxyadenosyl [goid 16992] [evidence IEA]; Catalysis of the reaction: octanoic acid + 2 S = lipoic acid + 2 H [goid 17140] [evidence IPI]	mLip1; C77512; MGC7254; 2900022L22Rik; 4933425M12Rik	mLip1; C77512; MGC7254; 2900022L22Rik; 4933425M12Rik
Mus musculus	RefSeq	ILMN_221016	ILMN_221016	LIAS	NM_024471.4	NM_024471.4		79464	146149226	NM_024471.4	Lias	NP_077791.1	ILMN_2738422	000840348	S	193	GCGTTCACGGTTAGAGCATTAAGTTCTTTGCCAGATAAGAAAAAGGAATT				5qC3.1	Mus musculus lipoic acid synthetase (Lias), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid [goid 9107] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipoic acid, 1,2-dithiolane-3-pentanoic acid, a coenzyme involved in oxidative decarboxylation of keto acids [goid 9105] [evidence IGI]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein N6-(octanoyl)lysine + 2 sulfur + 2 S-adenosyl-L-methionine = protein N6-(lipoyl)lysine + 2 L-methionine + 2 5'-deoxyadenosyl [goid 16992] [evidence IEA]; Catalysis of the reaction: octanoic acid + 2 S = lipoic acid + 2 H [goid 17140] [evidence IPI]	mLip1; C77512; MGC7254; 2900022L22Rik; 4933425M12Rik	mLip1; C77512; MGC7254; 2900022L22Rik; 4933425M12Rik
Mus musculus	Riken	ILMN_204656	ILMN_204656	9330156H06RIK	ri|9330156H06|PX00105G15|AK034099|2198					AK034099	9330156H06Rik		ILMN_1221354	001850053	S	1785	AGGACCACTCTACATTTGAGGCGGGGTCTCTCCATGAGGCTGAAGCTCAG										
Mus musculus	RefSeq	ILMN_218365	ILMN_218365	GBA2	NM_172692.1	NM_172692.1		230101	27369999	NM_172692.1	Gba2	NP_766280.1	ILMN_2900042	004060564	S	2760	ACCCCAGAGGCATACTGCCAGCAACAAGTGTTCCGCTCCCTGGCCTACAT	4	-	43588438-43588487	4qB1	Mus musculus glucosidase beta 2 (Gba2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine [goid 4348] [evidence IEA]	F630034E04	F630034E04
Mus musculus	Riken	ILMN_202466	ILMN_202466	UQCRB	ri|5830407L17|PX00038A22|AK017907|1344					AK017907	Uqcrb		ILMN_1252263	001010167	S	1290	GAGGTGGGTGGATCTCTTGTTTGAGGTCTGTCTGTCCACTCAAGGAGGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]		
Mus musculus	Riken	ILMN_205813	ILMN_205813	4833425P12RIK	ri|A430024N03|PX00134J07|AK039879|2343					AK039879	4833425P12Rik		ILMN_2575413	006020020	S	1732	CCCTTGCTTGAGACCCATCACTGGGCTTGATTGATCATCTCCCCAAGCTC										
Mus musculus	Riken	ILMN_206511	ILMN_206511	D630048A15RIK	ri|D630048A15|PX00198K20|AK085624|3226					AK085624	D630048A15Rik		ILMN_1219472	002060689	S	3078	CCCAACACAGGAAACTTCCAGAGCACAAGAGCCCTCCTTCCCTCAGCAGG										
Mus musculus	RefSeq	ILMN_217998	ILMN_217998	KLRD1	NM_010654.2	NM_010654.2		16643	153792032	NM_010654.2	Klrd1	NP_034784.1	ILMN_1255860	004890279	S	441	CAGGCCAGAGCACTGCATTGTTTACAGTCCAAGCAAAAGCGTTTCTGCTG				6qF3	Mus musculus killer cell lectin-like receptor, subfamily D, member 1 (Klrd1), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD94	CD94
Mus musculus	MEEBO	ILMN_219965	ILMN_219965	CLCN3	scl000666.1_0				34783725	BC057133	Clcn3		ILMN_1247310	002230047	S	2856	GAGACGCATTACAGTCCCTACTTCTGGAGGGACTACTTTGAATTGAGCCA						A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]		
Mus musculus	MEEBO	ILMN_217167	ILMN_217167	1110059P08RIK	scl38177.6.1_4	NM_025418.2			27754139	NM_025418.2	1110059P08Rik		ILMN_2679823	005910193	S	464	GTGGAAGGCAACATATATTCATAACTGCTTAAAGAATGGGGAGACTCCTC										
Mus musculus	Riken	ILMN_201936	ILMN_201936	8430427C03RIK	ri|8430427C03|PX00025A05|AK018444|1684					AK018444	8430427C03Rik		ILMN_1242820	005220021	S	1567	GTGCTGTGATGAACGTAGTGCAGGTGCCATTACCACAGAGGACTGGGTGG										
Mus musculus	MEEBO	ILMN_210640	ILMN_210640	2810032G03RIK	scl43416.3.1_10	NM_028318.2			31980748	NM_028318.2	2810032G03Rik		ILMN_1258190	003060465	S	1933	CGGGTGGTTTTGAAAAGGCAGGGTTTTCTCCCGGCTTTTGGATAAAGCTG										
Mus musculus	RefSeq	ILMN_223596	ILMN_223596	MDH2	NM_008617.2	NM_008617.2		17448	31982185	NM_008617.2	Mdh2	NP_032643.2	ILMN_2873112	001110541	S	1076	GCGAGGACTTTGTCAAGAACATGAAGTGAGAGGTGTGAGCCTCGAGCAGC	5	+	136266050-136266078:136266079-136266099	5qG2	Mus musculus malate dehydrogenase 2, NAD (mitochondrial) (Mdh2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [evidence ISA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Catalysis of the reversible conversion of pyruvate or oxaloacetate to malate [goid 16615] [evidence ISA]; Catalysis of the reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+. Also oxidizes some other 2-hydroxydicarboxylic acids [goid 30060] [evidence IDA]	Mdh-2; Mor-1; MDH; Mor1	Mdh-2; Mor-1; MDH; Mor1
Mus musculus	RefSeq	ILMN_188512	ILMN_259977	KCNK3	NM_010608.2	NM_010608.2		16527	88014691	NM_010608.2	Kcnk3	NP_034738.1	ILMN_2669487	003170576	S	1889	AAGCCCAAGGTGTTTTTGTCCAGGTCACCCCCACTCAGTCCCACCTGGCT	5	+	30925722-30925771	5qB1	Mus musculus potassium channel, subfamily K, member 3 (Kcnk3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	cTBAK-1; TASK	cTBAK-1; TASK
Mus musculus	RefSeq	ILMN_197820	ILMN_321907	LOC619842	XR_033763.1	XR_033763.1		619842	149252694	XR_033763.1	LOC619842		ILMN_1238587	007330403	S	1921	GTGAGGCCCTACCCATGTCCCAGGTGCAACAAAAACTTTGCCAGATTGGA				4qC5	PREDICTED: Mus musculus similar to zinc finger protein 352 (LOC619842), misc RNA.					
Mus musculus	RefSeq	ILMN_241140	ILMN_241140	AF067063	NM_001001449.1	NM_001001449.1		380878	47824871	NM_001001449.1	AF067063	NP_001001449.1	ILMN_2893661	002450689	S	369	CTACCTTCCCTGTGTACTTGAAAGCTGGGACTGCTTGAGATACCACTCCG	13	-	6353-6402		Mus musculus cDNA sequence AF067063 (AF067063), mRNA.				clone L5; clone L2	clone L5; clone L2
Mus musculus	MEEBO	ILMN_223894	ILMN_223894	LMX1B	scl19425.10.1_63				6754561	NM_010725	Lmx1b		ILMN_2771156	006380139	S	1043	TGGGCTCCCTGCAGGCCCGCGTGGGGAACCCCATTGACCGGCTCTACTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence NAS]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]; The process by which the anatomical structure of the cerebellum is generated and organized. Morphogenesis pertains to the creation of form. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21587] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [pmid 10767331] [evidence IEP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211510	ILMN_322906	LOC100039227	XM_001472554.1	XM_001472554.1		100039227	149265336	XM_001472554.1	LOC100039227	XP_001472604.1	ILMN_2633502	006270408	S	597	CGTGTGTGGTTTGAAAAGAATCCCAATCCTGATCTAGCTACCAGAGGACA	14	+	26943291-26943340	14qA3	PREDICTED: Mus musculus similar to RIKEN cDNA 1110051B16 gene (LOC100039227), mRNA.					
Mus musculus	RefSeq	ILMN_211510	ILMN_322906	LOC100039227	XM_001472554.1	XM_001472554.1		100039227	149265336	XM_001472554.1	LOC100039227	XP_001472604.1	ILMN_2616545	005910093	S	1809	GTATGTGCATAAACCACATGGACACAAAAAGGGGGCAATTATTTTTATTC	14	+	26948746-26948795	14qA3	PREDICTED: Mus musculus similar to RIKEN cDNA 1110051B16 gene (LOC100039227), mRNA.					
Mus musculus	RefSeq	ILMN_210669	ILMN_210669	LY6G5B	NM_148939.2	NM_148939.2		266614	50845392	NM_148939.2	Ly6g5b	NP_683741.1	ILMN_2608000	006550619	S	487	CTGCCCCCGGAGCTGGGCTTGTCCATTGCCGACCTTCGCCAAATATACTT	17	-	35252352-35252401	17qB1	Mus musculus lymphocyte antigen 6 complex, locus G5B (Ly6g5b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_190118	ILMN_190118	ZFP277	NM_172575.2	NM_172575.2		246196	141802367	NM_172575.2	Zfp277	NP_766163.1	ILMN_2467320	000110603	S	2208	AAATATAATCCAAACCTGATTGTATTACAGCGTTATTGTTTCCCTGTTAC	12	-	41041813-41041862	12qB1	Mus musculus zinc finger protein 277 (Zfp277), transcript variant 1, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2410017E24Rik; NIRF4	2410017E24Rik; NIRF4
Mus musculus	RefSeq	ILMN_190118	ILMN_190118	ZFP277	NM_172575.2	NM_172575.2		246196	141802367	NM_172575.2	Zfp277	NP_766163.1	ILMN_1234694	003990224	S	2030	GATGACCCTGACTTTAACCCATTGTTTAGTCTCCTTCCTACAGGCCTGTC	12	-	41041991-41042040	12qB1	Mus musculus zinc finger protein 277 (Zfp277), transcript variant 1, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2410017E24Rik; NIRF4	2410017E24Rik; NIRF4
Mus musculus	RefSeq	ILMN_214776	ILMN_214776	IMPG2	NM_174876.3	NM_174876.3		224224	46519170	NM_174876.3	Impg2	NP_777365.2	ILMN_1246435	006220097	S	6442	CCCCACTGGATACTAAGCCACTGACTAAAACACGTCTCTCAACTACATAG	16	+	56273396-56273445	16qC1.1	Mus musculus interphotoreceptor matrix proteoglycan 2 (Impg2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IDA]	Rsbp; IPM200; Spacrcan; PG10.2	Rsbp; IPM200; Spacrcan; PG10.2
Mus musculus	Riken	ILMN_205484	ILMN_205484	D030035F05RIK	ri|D030035F05|PX00180G01|AK050919|2040					AK050919	D030035F05Rik		ILMN_1245777	000780202	S	407	CAAGGCGGCTGTCTCAGATCTCTGGAGATTGTCCTGCTTTAAGGCTGGTC										
Mus musculus	MEEBO	ILMN_195017	ILMN_195017	NOL5	scl17916.19_0				9256554	NM_018868	Nol5		ILMN_1229371	007560088	S	7	AAATCAGCTCCTGTATTTTTTACACCAAAAAGATTTTCTCTGAAAGTAAT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IC ]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with a protein constituent of a small nucleolar ribonucleoprotein particle [goid 30519] [evidence ISO]		
Mus musculus	RefSeq	ILMN_219656	ILMN_219656	MRPS30	NM_021556.3	NM_021556.3		59054	142370796	NM_021556.3	Mrps30	NP_067531.1	ILMN_1225936	003780022	S	1303	CAGCTGTTGGCAAGCCAGGAGAAGGAACTTGATCTGGGACCTTGACGAGA	13	-	119169154-119169159:119169160-119169203	13qD2.3	Mus musculus mitochondrial ribosomal protein S30 (Mrps30), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2610020A16Rik; Pdcd9; PAP; AA968347	2610020A16Rik; Pdcd9; PAP; AA968347
Mus musculus	Riken	ILMN_203028	ILMN_203028	TRFP	ri|6030443I03|PX00057E09|AK031504|2170					AK031504	Trfp		ILMN_1231001	003060228	S	2021	GGACATGCCACTCTCTCACCCCTGAGTACAGCAATAGAGATGAGTCTGCC										
Mus musculus	RefSeq	ILMN_237165	ILMN_237165	KCNQ2	NM_001006675.1	NM_001006675.1		16536	54873649	NM_001006675.1	Kcnq2	NP_001006676.1	ILMN_3162662	000430376	I	2714	CATGTGAGCATTTGTGACCCCTGTGAGGGCCGATCTCCTAAGGTGGGACA	2	-	180820725-180820774	2qH4	Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 7, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	HNSPC; KQT2	HNSPC; KQT2
Mus musculus	MEEBO	ILMN_218170	ILMN_218170	9330186A19RIK	scl0320365.12_9	NM_178781.2			31341502	NM_178781.2	9330186A19Rik		ILMN_2692554	006450725	S	2855	CTGTCTGCATGCATCCCTTAATAGCCATTTGGATAGCCGGAAGTAGAGTC										
Mus musculus	RefSeq	ILMN_196725	ILMN_196725	HIST1H4M	NM_175657.1	NM_175657.1		319161	30089707	NM_175657.1	Hist1h4m	NP_783588.1	ILMN_2937548	000150291	S	42	CGGCGCCAAGCGCCACCGCAAAGTGCTGCGCGATAACATCCAGGGCATCA	13	-	21923936-21923985	13qA3.1	Mus musculus histone cluster 1, H4m (Hist1h4m), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196725	ILMN_196725	HIST1H4M	NM_175657.1	NM_175657.1		319161	30089707	NM_175657.1	Hist1h4m	NP_783588.1	ILMN_2597653	006370047	S	16	AAGGAGGAAAAGGCCTGGGCAAAGGCGGCGCCAAGCGCCACCGCAAAGTG	13	-	21923962-21924011	13qA3.1	Mus musculus histone cluster 1, H4m (Hist1h4m), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198836	ILMN_239548	DDEF2	NM_001004364.2	NM_001004364.2		211914	147907211	NM_001004364.2	Ddef2	NP_001004364.2	ILMN_1234509	003180358	S	1169	GCTTACATCAACCTCAGGGAAACAAGGAGCATGGAACAGAGAGGAACGGG				12qA1.2	Mus musculus development and differentiation enhancing factor 2 (Ddef2), transcript variant 2, mRNA.				MGC90837; Gm1523; Gm592	MGC90837; Gm1523; Gm592
Mus musculus	RefSeq	ILMN_199317	ILMN_239548	DDEF2	NM_001004364.2	NM_001004364.2		211914	147907211	NM_001004364.2	Ddef2	NP_001004364.2	ILMN_1214275	003140730	S	2502	GGCCAGAGATACTGCAAACCTCACCAAGGACAAGCAGAGGGGCTTTGGGC				12qA1.2	Mus musculus development and differentiation enhancing factor 2 (Ddef2), transcript variant 2, mRNA.				MGC90837; Gm1523; Gm592	MGC90837; Gm1523; Gm592
Mus musculus	RefSeq	ILMN_201488	ILMN_239548	DDEF2	NM_001004364.2	NM_001004364.2		211914	147907211	NM_001004364.2	Ddef2	NP_001004364.2	ILMN_2542476	001170356	S	2991	CTACAACTGCGTGGCTGACAACCCAGACGAGCTGACTTTCTCTGAGGGCG				12qA1.2	Mus musculus development and differentiation enhancing factor 2 (Ddef2), transcript variant 2, mRNA.				MGC90837; Gm1523; Gm592	MGC90837; Gm1523; Gm592
Mus musculus	RefSeq	ILMN_219057	ILMN_234115	TDRKH	NM_028307.1	NM_028307.1		72634	110625941	NM_028307.1	Tdrkh	NP_082583.1	ILMN_2703698	005570619	S	908	CAGCTTTCAGAATTCTGGTGCCCAGAGCAGTCCAGAGACGTCCATGTTTG	3	+	94229982-94230031	3qF2.1	Mus musculus tudor and KH domain containing protein (Tdrkh), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2700091C21Rik; Tdrd2	2700091C21Rik; Tdrd2
Mus musculus	RefSeq	ILMN_219057	ILMN_234115	TDRKH	NM_028307.1	NM_028307.1		72634	110625941	NM_028307.1	Tdrkh	NP_082583.1	ILMN_2734624	001990142	S	2427	CTACCTCTCACCCACAGTTGCCGAGGTTATTGGAGATGGGTCCTCCAGCT	3	+	94235198-94235247	3qF2.1	Mus musculus tudor and KH domain containing protein (Tdrkh), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2700091C21Rik; Tdrd2	2700091C21Rik; Tdrd2
Mus musculus	RefSeq	ILMN_217229	ILMN_217229	MID1IP1	NM_026524.2	NM_026524.2		68041	31980905	NM_026524.2	Mid1ip1	NP_080800.1	ILMN_2847332	005130221	S	1452	CAGAGGAGGCCTTGGCGTTGCTAGGATTGCGTCAGTTTTCCTGTTTGCAC	X	+	9876180-9876229	XqA1.1	Mus musculus Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) (Mid1ip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IPI]	Mig12; 3110038L01Rik	Mig12; 3110038L01Rik
Mus musculus	Riken	ILMN_205780	ILMN_205780	SSBP2	ri|D230008K11|PX00187P20|AK051840|2451					AK051840	Ssbp2		ILMN_1213534	005860594	S	2340	CCCCCTGTGCAGTTAGTCAAGGAGCCATCACATGAGCAGAGAAATGTTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199722	ILMN_199722	LOC383864	XM_357299.1	XM_357299.1			38076548	XM_357299.1	LOC383864		ILMN_1239461	000060315	S	603	GCTTCTGGGAAATGGAAGCACCAAGGTTCCGGTTTTGAAGCTGCTTTTGC										
Mus musculus	Riken	ILMN_203927	ILMN_203927	A130022A09RIK	ri|A130022A09|PX00122G21|AK037499|4514					AK037499	A130022A09Rik		ILMN_1230398	006510615	S	4367	TGCATGTGCTGAGCTGGGTTAGGGAGGAACCAGATACAGTTCAGGGTTCG										
Mus musculus	RefSeq	ILMN_203582	ILMN_247795	4930451C15RIK	NM_029053.2	NM_029053.2		74685	142354867	NM_029053.2	4930451C15Rik	NP_083329.1	ILMN_1238803	006250021	S	1369	CTCTGGAAGAGAAGCCAGTGTTCCTAGCCACCGAACCATCTCCAACCCCT	16	-	17549004-17549053	16qA3	Mus musculus RIKEN cDNA 4930451C15 gene (4930451C15Rik), mRNA. XM_922208 XM_990304 XM_990331 XM_990387			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mCP17390; mCG12354	mCP17390; mCG12354
Mus musculus	RefSeq	ILMN_253516	ILMN_253516	OCIAD2	NM_026950.3	NM_026950.3		433904	114326513	NM_026950.3	Ociad2	NP_081226.1	ILMN_2943722	006350133	S	1367	CTTGGTCCCCCAGACAACAGCTTCCTGGAAGGAACACTGTAGGACTGAAT	5	-	73714222-73714271	5qC3.2	Mus musculus OCIA domain containing 2 (Ociad2), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]			MGC51598; 1810027I20Rik	MGC51598; 1810027I20Rik
Mus musculus	RefSeq	ILMN_223636	ILMN_253516	OCIAD2	NM_026950.3	NM_026950.3		433904	114326513	NM_026950.3	Ociad2	NP_081226.1	ILMN_2766875	003520053	S	484	GTGCCAGAGTAAATTCCATTCCTTTGAAGATCAGCTCCGTGGTGCTGGCT	5	-	73717538-73717587	5qC3.2	Mus musculus OCIA domain containing 2 (Ociad2), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]			MGC51598; 1810027I20Rik	MGC51598; 1810027I20Rik
Mus musculus	RefSeq	ILMN_191786	ILMN_253516	OCIAD2	NM_026950.3	NM_026950.3		433904	114326513	NM_026950.3	Ociad2	NP_081226.1	ILMN_2482178	004880494	S	1277	CCCATGGATCCATTCTCATGGTCAGCACTCAACAGTGGGTTCTTTTACCC	5	-	73714312-73714361	5qC3.2	Mus musculus OCIA domain containing 2 (Ociad2), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]			MGC51598; 1810027I20Rik	MGC51598; 1810027I20Rik
Mus musculus	RefSeq	ILMN_209040	ILMN_247905	OLFR54	NM_010997.1	NM_010997.1		18354	22203766	NM_010997.1	Olfr54	NP_035127.1	ILMN_1249015	005720692	S	731	GCTCACACTTGTCTGTGGTCACTCTGTTCTATGGCACAGTACTGGGTATC	11	+	50841236-50841285	11qB1.3	Mus musculus olfactory receptor 54 (Olfr54), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR126-1; F3	MOR126-1; F3
Mus musculus	MEEBO	ILMN_189897	ILMN_189897	2900060P06RIK	scl16835.1.213_142						2900060P06Rik		ILMN_1256063	002190224	S	2	GGTCAGTAGTGATGTGGAATATTCACCCAGCTTCGCGCTCTCATTGGGAC										
Mus musculus	RefSeq	ILMN_210653	ILMN_210653	ATXN2	NM_009125.2	NM_009125.2		20239	124244103	NM_009125.2	Atxn2	NP_033151.2	ILMN_3136056	004390593	A	4043	GGAGGATGTTTTGGACCGAGTAGAGGCATGTAGGGACTTGTGGCTGTTCC	5	+	122264530-122264579	5qF	Mus musculus ataxin 2 (Atxn2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]	Interacting selectively with the DBD, DNA binding domain, of a protein. The DNA binding domain of the vitamin D receptor, one of a family of receptors with the DBD, is split into three regions, the P, D and T boxes. Residues that are critical for target sequence selectivity form the P-box. The D-box contains residues that are important for homodimerization of class I nuclear receptors. The T-box is essential for both DNA-binding and transactivation of the VDR; this region may also be important for dimerization with RXR for class II nuclear receptors [goid 50692] [evidence IDA]	AW544490; ATX2; 9630045M23Rik; Sca2	AW544490; ATX2; 9630045M23Rik; Sca2
Mus musculus	RefSeq	ILMN_224019	ILMN_230995	OLFR1125	NM_147028.2	NM_147028.2		259030	115529457	NM_147028.2	Olfr1125	NP_667239.2	ILMN_2773275	005960092	S	749	ATCTTGCAGTAGTGATATTATTCTTTGGATCAGGTATGATTACATATTTT	2	+	87275394-87275443	2qD	Mus musculus olfactory receptor 1125 (Olfr1125), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR264-3	MOR264-3
Mus musculus	Riken	ILMN_204407	ILMN_204407	A130096P14RIK	ri|A130096P14|PX00126I07|AK038350|2049					AK038350	A130096P14Rik		ILMN_1212977	006770682	S	1645	AGGGCCAGAGCTGTTATAGGTAGTGCTAGGGGTGAGACCACAGGGCAAGC										
Mus musculus	RefSeq	ILMN_197516	ILMN_197516	GM912	XM_354829.4	XM_354829.4		380918	94397261	XM_354829.4	Gm912	XP_354829.4	ILMN_1223488	006400575	S	756	TCATCACCGATGGGGACTGCCTGGTTCTCAACACTTCACTGGCTCAGCTC	14	+	75925794-75925843	14qD3	PREDICTED: Mus musculus gene model 912, (NCBI) (Gm912), mRNA.					
Mus musculus	RefSeq	ILMN_194913	ILMN_226014	COL19A1	NM_007733.2	NM_007733.2		12823	114326514	NM_007733.2	Col19a1	NP_031759.2	ILMN_1220347	001230754	S	3987	GCTCTTTTGAGATTGAAGTAGTACATTACTGCTGTTGACTGTCTTAGGAC	1	-	24271027-24271076	1qA5	Mus musculus collagen, type XIX, alpha 1 (Col19a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215980	ILMN_215980	OLFR1254	NM_146476.1	NM_146476.1		258468	33239031	NM_146476.1	Olfr1254	NP_666687.1	ILMN_2665975	006400386	S	761	TCATGTATGTTAGACCTGTCTCCAATTTTCCTGTTGATAAATCAGTTACT	2	-	89628697-89628746	2qE1	Mus musculus olfactory receptor 1254 (Olfr1254), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-13	MOR231-13
Mus musculus	RefSeq	ILMN_210901	ILMN_240789	CD69	NM_001033122.3	NM_001033122.3		12515	146198635	NM_001033122.3	Cd69	NP_001028294.1	ILMN_1218240	000540647	S	1414	GGCAGATCTCTGTCAGGACACACCCTGTGGTTTGACCTTGGAATAACTCC				6qF3	Mus musculus CD69 antigen (Cd69), mRNA. XM_925572	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	VEA; AIM; AI452015; 5830438K24Rik	VEA; AIM; AI452015; 5830438K24Rik
Mus musculus	RefSeq	ILMN_259573	ILMN_259573	OLFR9	NM_146861.1	NM_146861.1		18373	22203794	NM_146861.1	Olfr9	NP_667072.1	ILMN_2852558	000450168	S	780	GAGGCCCCAGGCTGATTCATTTGGGAACACAGACCAGATTCTTACTTTGG	10	+	128427749-128427798	10qD3	Mus musculus olfactory receptor 9 (Olfr9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR269-3	MOR269-3
Mus musculus	RefSeq	ILMN_218979	ILMN_218979	NDUFV1	NM_133666.2	NM_133666.2		17995	118130958	NM_133666.2	Ndufv1	NP_598427.1	ILMN_2702704	000070286	S	1494	CGTGAGTCCACACCCTAGCCTGACAATTTCTCATCCCTTTGGGAAACTGG	19	-	4007533-4007578:4007579-4007582	19qA	Mus musculus NADH dehydrogenase (ubiquinone) flavoprotein 1 (Ndufv1), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [evidence IEA]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188938	ILMN_188938	DLST	scl42962.14_11				30841024	NM_030225	Dlst		ILMN_2692509	006770041	S	2447	AAATGCTTAAGTGGTTTTGAGCGCTCCTAGGCCTCGTATCCTGCACTGAG						A complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) ; EC:1.2.4.2 (E1), dihydrolipoamide S-succinyltransferase ; EC:2.3.1.61 (E2) and dihydrolipoamide dehydrogenase ; EC:1.8.1.4 (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2) [goid 45252] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with lipoic acid, 1,2-dithiolane-3-pentanoic acid [goid 31405] [evidence IEA]; Catalysis of the reaction: succinyl-CoA + dihydrolipoamide = CoA + S-succinyldihydrolipoamide [goid 4149] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_189611	ILMN_216498	IL16	NM_010551.3	NM_010551.3		16170	118130040	NM_010551.3	Il16	NP_034681.2	ILMN_2462779	006620193	S	1657	AACGTGAGAAGCACTCAGCGCCCCCACATCGAAGGGCCCAGAAGATCATG	7	-	90809694-90809743	7qD3	Mus musculus interleukin 16 (Il16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IDA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	KIAA4048; mKIAA4048	KIAA4048; mKIAA4048
Mus musculus	RefSeq	ILMN_216498	ILMN_216498	IL16	NM_010551.3	NM_010551.3		16170	118130040	NM_010551.3	Il16	NP_034681.2	ILMN_2671738	002760427	S	4891	AACACATAGAAGACTTTTTGGTTGGGTCGAGAGCCTAGAAGGAGTGGAAC	7	-	90791621-90791670	7qD3	Mus musculus interleukin 16 (Il16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IDA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	KIAA4048; mKIAA4048	KIAA4048; mKIAA4048
Mus musculus	RefSeq	ILMN_216995	ILMN_216995	A530023O14RIK	NM_175648.2	NM_175648.2		244183	31342270	NM_175648.2	A530023O14Rik	NP_783579.1	ILMN_1234137	004390594	S	137	AAAAAACATACCAACCTCCAGATCTGAACAGCATGCTACAATCATTTCAA	7	-	111506974-111507023	7qE3	Mus musculus RIKEN cDNA A530023O14 gene (A530023O14Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216995	ILMN_216995	A530023O14RIK	NM_175648.2	NM_175648.2		244183	31342270	NM_175648.2	A530023O14Rik	NP_783579.1	ILMN_2689651	004230500	S	2575	AGAGAGAGCACTTACAGGGCAGCAAGTAGAATCCAGATGTGGCATCACAC	7	-	111504058-111504107	7qE3	Mus musculus RIKEN cDNA A530023O14 gene (A530023O14Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216995	ILMN_216995	A530023O14RIK	NM_175648.2	NM_175648.2		244183	31342270	NM_175648.2	A530023O14Rik	NP_783579.1	ILMN_2761994	001510634	S	119	GCCCCAAATGATCCCGAAAAAAACATACCAACCTCCAGATCTGAACAGCA	7	-	111506992-111507041	7qE3	Mus musculus RIKEN cDNA A530023O14 gene (A530023O14Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_201694	ILMN_201694	2810417K24RIK	ri|2810417K24|ZX00035I13|AK013109|1022					AK013109	2810417K24Rik		ILMN_2543842	002470730	S	76	TACAGGTCGGGTGGCCTCACTGTCCACTTTCGCGTCGGGTTGGAACTTTG										
Mus musculus	Riken	ILMN_204750	ILMN_204750	5730496N17RIK	ri|B930041B10|PX00164E16|AK047235|608					AK047235	5730496N17Rik		ILMN_2567347	001110603	S	439	GCATCCGGGTTGTTAGAGCCATAGAACTCCTTTAGAGCCTGGCACCCGCT										
Mus musculus	RefSeq	ILMN_218124	ILMN_218124	ASB8	NM_030121.3	NM_030121.3		78541	141801748	NM_030121.3	Asb8	NP_084397.2	ILMN_1225252	000270309	S	1979	GGCTGGAGACTACACCCAAATGAATAGGACCTTCTGACGCAGCTAACTCA	15	-	97965150-97965199	15qF1	Mus musculus ankyrin repeat and SOCS box-containing 8 (Asb8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		C430011H06Rik; AI788835; 4930539L19Rik	C430011H06Rik; AI788835; 4930539L19Rik
Mus musculus	RefSeq	ILMN_197623	ILMN_197623	LOC381460	XM_355412.1	XM_355412.1			38076920	XM_355412.1	LOC381460		ILMN_2528775	006590673	S	2517	ATACTCTGTGACATGGTACCGGGGCAGAGGAACTGCCACGGCTACTGCTG										
Mus musculus	RefSeq	ILMN_224179	ILMN_241897	RAB25	NM_016899.4	NM_016899.4		53868	146149331	NM_016899.4	Rab25	NP_058595.2	ILMN_2776087	000630451	S	993	CTCTCCATCACCTGGACCCCTTACAGGCGAGGGCCGGAAAATAAAGCTGT				3qF1	Mus musculus RAB25, member RAS oncogene family (Rab25), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV012978	AV012978
Mus musculus	RefSeq	ILMN_218972	ILMN_218972	OBFC1	NM_175360.2	NM_175360.2		108689	31341702	NM_175360.2	Obfc1	NP_780569.1	ILMN_2702575	001500041	S	1463	AGGAAAATAGGACTGAGACAGATGGCTCTGATGTCAGCCATGACACACAC	19	-	47575903-47575952	19qD1	Mus musculus oligonucleotide/oligosaccharide-binding fold containing 1 (Obfc1), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2310057J23Rik; 0610009H20Rik; AI413458	2310057J23Rik; 0610009H20Rik; AI413458
Mus musculus	RefSeq	ILMN_219507	ILMN_219507	LYPLAL1	NM_146106.1	NM_146106.1		226791	22122620	NM_146106.1	Lyplal1	NP_666218.1	ILMN_1248108	002190328	S	1302	ACAGAATCCTACACTGAAGGCTTCCCAGATTTGTGAAAATCAGTTTGCCC	1	-	187911836-187911885	1qH5	Mus musculus lysophospholipase-like 1 (Lyplal1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC28394; BC027340; Q96AVO	MGC28394; BC027340; Q96AVO
Mus musculus	RefSeq	ILMN_219507	ILMN_219507	LYPLAL1	NM_146106.1	NM_146106.1		226791	22122620	NM_146106.1	Lyplal1	NP_666218.1	ILMN_1254112	005080280	S	257	CGTATACTCCTCTGAAGGGAGGGCTCTCCAATGTGTGGTTTGACAGATTT	1	-	187924189-187924238	1qH5	Mus musculus lysophospholipase-like 1 (Lyplal1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC28394; BC027340; Q96AVO	MGC28394; BC027340; Q96AVO
Mus musculus	Riken	ILMN_205130	ILMN_205130	GABT1	ri|E130314A22|PX00209I21|AK053831|3446					AK053831	Gabt1		ILMN_1236474	000150768	S	3294	TGCCATAGACTGCCCTAAGCATTGGGAGAACAGAGATGTCAGCCGGGACC										
Mus musculus	RefSeq	ILMN_223333	ILMN_223333	CACNA2D3	NM_009785.1	NM_009785.1		12294	6753235	NM_009785.1	Cacna2d3	NP_033915.1	ILMN_2762672	006330338	S	3311	AGTCTTCAGGCCCAGGCGGCCTTGCTGCTGCTGCCCCTGGTTTCGAGTCT	14	-	29718463-29718512	14qA3-qB	Mus musculus calcium channel, voltage-dependent, alpha2/delta subunit 3 (Cacna2d3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	Cacnad3	Cacnad3
Mus musculus	RefSeq	ILMN_215464	ILMN_256461	OLFR214	NM_146759.1	NM_146759.1		258754	22129326	NM_146759.1	Olfr214	NP_666970.1	ILMN_2659858	003290017	S	620	CCTTCGGTGTCGCTGTGGTTGTCCTTTTCACATCTGTCCTTGCGGCTATA	6	+	116507064-116507113	6qE3	Mus musculus olfactory receptor 214 (Olfr214), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR119-1	MOR119-1
Mus musculus	RefSeq	ILMN_192030	ILMN_226562	PPP1R3E	XM_909597.2	XM_909597.2		105651	94397541	XM_909597.2	Ppp1r3e	XP_914690.1	ILMN_1221587	006960241	S	3071	CTCTTCGCCCTTCGCTACCGGGTTACCGGCCGAGAGTTCTGGGATAACAA				14qC3	PREDICTED: Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 3E (Ppp1r3e), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]			
Mus musculus	RefSeq	ILMN_219918	ILMN_219918	GOLGA2	NM_133852.2	NM_133852.2		99412	124378041	NM_133852.2	Golga2	NP_598613.2	ILMN_3137432	001850176	A	4062	GGAGGGCTTCCATCTTTTTGAGGCACTTTGGGACAGGGAAAGTGGGTACC	2	+	32163061-32163110	2qB	Mus musculus golgi autoantigen, golgin subfamily a, 2 (Golga2), transcript variant 1, mRNA. XM_917195 XM_924742 XM_924744 XM_924745 XM_924752 XM_924758 XM_990733 XM_990778 XM_990810 XM_990841 XM_990863	The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]			GM 130; golgin-95; KIAA4150; AW555139; GM-130; mKIAA4150; GM130	GM 130; golgin-95; KIAA4150; AW555139; GM-130; mKIAA4150; GM130
Mus musculus	RefSeq	ILMN_219918	ILMN_219918	GOLGA2	NM_133852.2	NM_133852.2		99412	124378041	NM_133852.2	Golga2	NP_598613.2	ILMN_3060149	006770348	I	281	TGAAGGTGCTGGTGTCCGACCTTAACCGTTCCAATGGGGTCTCACTCCCC	2	+	32148848-32148897	2qB	Mus musculus golgi autoantigen, golgin subfamily a, 2 (Golga2), transcript variant 1, mRNA. XM_917195 XM_924742 XM_924744 XM_924745 XM_924752 XM_924758 XM_990733 XM_990778 XM_990810 XM_990841 XM_990863	The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]			GM 130; golgin-95; KIAA4150; AW555139; GM-130; mKIAA4150; GM130	GM 130; golgin-95; KIAA4150; AW555139; GM-130; mKIAA4150; GM130
Mus musculus	RefSeq	ILMN_219918	ILMN_219918	GOLGA2	NM_133852.2	NM_133852.2		99412	124378041	NM_133852.2	Golga2	NP_598613.2	ILMN_2715198	006660576	S	4307	GGCTGGGAACCTTATTTATTGGTAGTGTTAGGTCAGAGGGCAGGAGGCGG	2	+	32163306-32163355	2qB	Mus musculus golgi autoantigen, golgin subfamily a, 2 (Golga2), transcript variant 1, mRNA. XM_917195 XM_924742 XM_924744 XM_924745 XM_924752 XM_924758 XM_990733 XM_990778 XM_990810 XM_990841 XM_990863	The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]			GM 130; golgin-95; KIAA4150; AW555139; GM-130; mKIAA4150; GM130	GM 130; golgin-95; KIAA4150; AW555139; GM-130; mKIAA4150; GM130
Mus musculus	RefSeq	ILMN_219918	ILMN_219918	GOLGA2	NM_133852.2	NM_133852.2		99412	124378041	NM_133852.2	Golga2	NP_598613.2	ILMN_1231420	002340441	S	159	GCAGAAGAACAGCCCGGGTGTTCCTGCAGGAGCAAAGAAGAAGAAAAAGA	2	+	32147627-32147676	2qB	Mus musculus golgi autoantigen, golgin subfamily a, 2 (Golga2), transcript variant 1, mRNA. XM_917195 XM_924742 XM_924744 XM_924745 XM_924752 XM_924758 XM_990733 XM_990778 XM_990810 XM_990841 XM_990863	The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]			GM 130; golgin-95; KIAA4150; AW555139; GM-130; mKIAA4150; GM130	GM 130; golgin-95; KIAA4150; AW555139; GM-130; mKIAA4150; GM130
Mus musculus	RefSeq	ILMN_216457	ILMN_216457	SBSN	NM_172205.1	NM_172205.1		282619	26251306	NM_172205.1	Sbsn	NP_757342.1	ILMN_2951407	003180372	S	1982	AGCTGCTGAATGGGTCTCATCAAGGTCAAGGCGGGTACGGAGGCCAGCAC				7qB1	Mus musculus suprabasin (Sbsn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110005D19Rik; AI747508	1110005D19Rik; AI747508
Mus musculus	Riken	ILMN_205450	ILMN_205450	KDR	ri|E330034B14|PX00318D12|AK054510|3176					AK054510	Kdr		ILMN_2572649	005090451	S	2488	CGTGATAACCAGAGGCTGACCCTTTCCGGCACTCCTGAACGAGAGAGAAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; Any process involved in the maintenance of an equilibrium of the surface-active lipoprotein mixture which coats the alveoli [goid 43129] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 45446] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions [goid 55074] [evidence IDA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IDA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197944	ILMN_197944	LOC381046	XM_354963.1	XM_354963.1			38079773	XM_354963.1	LOC381046		ILMN_1247367	003800066	S	330	AGCCAAGGGTCAGAGGCTCTGCCAACCGAAGCCTCAGGTCCCTGTGAAGA										
Mus musculus	RefSeq	ILMN_196476	ILMN_258406	1700065O13RIK	NM_028543.3	NM_028543.3		73451	146141201	NM_028543.3	1700065O13Rik	NP_082819.1	ILMN_2645368	000650400	S	2985	GAGGCAGTGCTTTTTCTACTTTACTGTAGAGCTGTTGGAGTCACTGAACT				17qB1	Mus musculus RIKEN cDNA 1700065O13 gene (1700065O13Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI839635	AI839635
Mus musculus	RefSeq	ILMN_192033	ILMN_246398	PPP1R16B	NM_153089.3	NM_153089.3		228852	142372346	NM_153089.3	Ppp1r16b	NP_694729.1	ILMN_2758587	000840397	S	3019	TTGGTAAAAGCGTTCTTTCAGGCTGTAAGATCCCAGGTGGGAGGTTCCTG	2	+	158588404-158588453	2qH1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 16B (Ppp1r16b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			C130078N17Rik; TIMAP; Wdt4; ANKRD4	C130078N17Rik; TIMAP; Wdt4; ANKRD4
Mus musculus	MEEBO	ILMN_186178	ILMN_186178	KLF5	scl45215.1.1_294				31981872	NM_009769	Klf5		ILMN_2433293	004060360	S	20	AGGCAGAGGTGATCTGCTCTATGTATCATTTTTGGGAGCAAAGAACACAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell [goid 30033] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214622	ILMN_214622	LGR5	NM_010195.2	NM_010195.2		14160	110624771	NM_010195.2	Lgr5	NP_034325.2	ILMN_2650008	005700689	S	2561	TCTTTGGGATTGTTCGATGGTGAAGCACATTGCTCTGTTGCTCTTCGCCA	10	-	114889470-114889519	10qD2	Mus musculus leucine rich repeat containing G protein coupled receptor 5 (Lgr5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]	FEX; Gpr49	FEX; Gpr49
Mus musculus	RefSeq	ILMN_211224	ILMN_211224	ASGR2	NM_007493.3	NM_007493.3		11890	118131075	NM_007493.3	Asgr2	NP_031519.1	ILMN_2613758	004210059	S	1029	CGCTGGGTATGCGAAAAGAGACGGAACATCACCCACTAGGAGTCGGCTCG	11	+	69911301-69911340:69911322-69911331	11qB3	Mus musculus asialoglycoprotein receptor 2 (Asgr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways involving glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9100] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [evidence IMP]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	ASGPR2; Asgr-2; Asgr	ASGPR2; Asgr-2; Asgr
Mus musculus	RefSeq	ILMN_222044	ILMN_222044	HMGA2	NM_178057.2	NM_178057.2		15364	31341835	NM_178057.2	Hmga2	NP_835158.1	ILMN_2763100	006020156	S	2547	TACACAATGTGATTTTTGTAAAAAAATGTCTCAAGCAGATTTGTTTTGGA	10	-	119765243-119765292	10qD2	Mus musculus high mobility group AT-hook 2 (Hmga2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	pg; pygmy; Hmgic; HMGI-C; 9430083A20Rik; MGC103393	pg; pygmy; Hmgic; HMGI-C; 9430083A20Rik; MGC103393
Mus musculus	RefSeq	ILMN_215475	ILMN_215475	OLFM2	NM_173777.2	NM_173777.2		244723	31343362	NM_173777.2	Olfm2	NP_776138.1	ILMN_2905573	004900386	S	1372	TACAACGTCACCCTGTTCCACGTCATCAGCACTGCCGGGGACCCCTAGGT	9	-	20472548-20472550:20472551-20472597	9qA3	Mus musculus olfactomedin 2 (Olfm2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A030009A06Rik	A030009A06Rik
Mus musculus	Riken	ILMN_201757	ILMN_201757	GFPT1	ri|2510027N18|ZX00047P18|AK011010|912					AK011010	Gfpt1		ILMN_2544350	006060753	S	290	GGTTCAACCCTGGCGTTTCTGAAGGCTTTTCCGGGGGGCCCGAACAGGTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate [goid 4360] [evidence IEA]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198285	ILMN_252057	GM1614	XM_908264.3	XM_908264.3		381148	149269955	XM_908264.3	Gm1614	XP_913357.1	ILMN_1213493	000050593	S	1919	TGGATACACCGGAACAGCCCCGAAGTCACCTCACAAGCACTCTGGACGAC				18qB2	PREDICTED: Mus musculus gene model 1614, (NCBI) (Gm1614), mRNA.					
Mus musculus	RefSeq	ILMN_224197	ILMN_230763	C1QA	NM_007572.2	NM_007572.2		12259	124286804	NM_007572.2	C1qa	NP_031598.2	ILMN_2776431	002350132	S	724	GCTTCAGCTGCGACGAGGGGACGAGGTGTGGATCGAAAAGGACCCCGCAA	4	-	136452139-136452188	4qD3	Mus musculus complement component 1, q subcomponent, alpha polypeptide (C1qa), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IMP]		C1q; AI255395	C1q; AI255395
Mus musculus	MEEBO	ILMN_210948	ILMN_210948	4930448I06RIK	scl16822.4.1_8				51704951	XM_488893	4930448I06Rik		ILMN_2610909	006580546	S	574	CCTGTTGCTATTATGAATCAGAAACAGATTTCAAGCTCCAGCACTCTCAG										
Mus musculus	RefSeq	ILMN_205567	ILMN_325856	TERF2	NM_001083118.1	NM_001083118.1		21750	133904139	NM_001083118.1	Terf2	NP_001076587.1	ILMN_1247870	005690523	S	2154	CAGCTGAAAGGAGCAAGCATGGGTGTCCGGGGTCTTAAGCTGCATGATGC	8	-	109599682-109599731	8qD3	Mus musculus telomeric repeat binding factor 2 (Terf2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32206] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32206] [evidence IMP]; A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse [goid 31848] [evidence IMP]; A process that prevents non-homologous end joining at telomere, thereby ensuring that telomeres do not fuse [goid 31848] [evidence IDA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TRF2	TRF2
Mus musculus	RefSeq	ILMN_218067	ILMN_218067	FAM114A2	NM_026342.2	NM_026342.2		67726	142372675	NM_026342.2	Fam114a2	NP_080618.1	ILMN_1232976	003840072	S	2300	ACAGCAGGATGTAGCCTCCCAAGTCCCCTCATTGTTCCTCTGTTGTCGTG	11	-	57296703-57296752	11qB1.3	Mus musculus family with sequence similarity 114, member A2 (Fam114a2), mRNA.				9030624B09Rik; RP23-206L21.2	9030624B09Rik; RP23-206L21.2
Mus musculus	RefSeq	ILMN_216063	ILMN_318104	5830477G23RIK	XM_001476159.1	XM_001476159.1		76116	149268352	XM_001476159.1	5830477G23Rik	XP_001476209.1	ILMN_1231131	000460689	S	1127	TCTTCCTGGCACCGGCTGGAACTGGATAGGTGATTTACTGCCATATCAGC	17	-	7610384-7610433	17qA1	PREDICTED: Mus musculus RIKEN cDNA 5830477G23 gene (5830477G23Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220663	ILMN_324629	LOC100047082	XM_001473415.1	XM_001473415.1		100047082	149274893	XM_001473415.1	LOC100047082	XP_001473465.1	ILMN_1255033	006280019	S	8639	AATTGGAGGAGCACAATGAGGACGACTACCTTCTGGGGGTGCTCGGGGAG					PREDICTED: Mus musculus similar to fibrillin 2 (LOC100047082), mRNA.					
Mus musculus	RefSeq	ILMN_197674	ILMN_197674	LOC381482	XM_358595.1	XM_358595.1			38077272	XM_358595.1	LOC381482		ILMN_1226479	000460601	S	578	GGTGGTTTGTTTGCCTGTATTGGCCTTGTGCTGAGGAACGGGACCTGGGC										
Mus musculus	MEEBO	ILMN_210299	ILMN_210299	SEMA5A	scl0020356.1_230	NM_009154.1			6677914	NM_009154.1	Sema5a		ILMN_2604224	001660605	S	3786	ATCCCGCTCATCGTCTCTCTGCCAACGTTTTGTGAAAACTAAAAGAATCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	 [goid 8046] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210618	ILMN_255087	1110014N23RIK	NM_001081041.1	NM_001081041.1		68505	124486661	NM_001081041.1	1110014N23Rik	NP_001074510.1	ILMN_2737979	005690242	S	2420	CCTAGAGGCCCTTCCCCGCTGGCGGGTTCATGGATCCTTCTAATAAACTT	19	-	6068003-6068052	19qA	Mus musculus RIKEN cDNA 1110014N23 gene (1110014N23Rik), mRNA.				AI837850; 3110057M17Rik	AI837850; 3110057M17Rik
Mus musculus	RefSeq	ILMN_210618	ILMN_255087	1110014N23RIK	NM_001081041.1	NM_001081041.1		68505	124486661	NM_001081041.1	1110014N23Rik	NP_001074510.1	ILMN_2607450	007610358	S	276	TGAGACGGACATGGTACGGCAGATCCGGGCTCTAGACAGCGACATGCAGA	19	-	6076404-6076453	19qA	Mus musculus RIKEN cDNA 1110014N23 gene (1110014N23Rik), mRNA.				AI837850; 3110057M17Rik	AI837850; 3110057M17Rik
Mus musculus	Riken	ILMN_203187	ILMN_203187	A930005F14RIK	ri|A930005F14|PX00065N11|AK044279|2823					AK044279	A930005F14Rik		ILMN_1250905	000460192	S	2360	CGAGGTGAGTTGTGGTAGGGACAGCAAGCCAAATAATCCCTCTTGTCCCC										
Mus musculus	RefSeq	ILMN_197194	ILMN_197194	LOC238599	XM_138600.2	XM_138600.2			38074526	XM_138600.2	LOC238599		ILMN_1221632	006350110	S	1064	GCAGCAACCGCAGAGTGACCAGAAACTGGACTTCTAAGGGACGAGAGGAG										
Mus musculus	RefSeq	ILMN_198657	ILMN_198657	LOC237016	XM_142088.3	XM_142088.3			38086712	XM_142088.3	LOC237016		ILMN_2532463	004120735	S	999	GCCATGCCTCACACATACTGAAGGCAGTAATGTGGTCAGTGAAGTCCTAG										
Mus musculus	RefSeq	ILMN_219432	ILMN_219432	OLFML3	NM_133859.2	NM_133859.2		99543	86439988	NM_133859.2	Olfml3	NP_598620.2	ILMN_1233455	001190202	S	1525	AGTTTAGTTCCAAACTCAGAGCCCTGTCCTTTGGAGAGGGTCAACCCCAG	3	-	103540221-103540270	3qF2.2	Mus musculus olfactomedin-like 3 (Olfml3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AI115209; ONT3; 2810002E22Rik; mONT3; AW550633; HNOEL-iso	AI115209; ONT3; 2810002E22Rik; mONT3; AW550633; HNOEL-iso
Mus musculus	RefSeq	ILMN_214431	ILMN_214431	COQ4	NM_178693.4	NM_178693.4		227683	146198610	NM_178693.4	Coq4	NP_848808.1	ILMN_2647972	006270450	S	1341	GCAGTCTAGGAATCAAGTCCCCAACCATCAGAAAACTAACAAGTCCCTTG				2qB	Mus musculus coenzyme Q4 homolog (yeast) (Coq4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A330041N06; D2Ertd97e	A330041N06; D2Ertd97e
Mus musculus	RefSeq	ILMN_223466	ILMN_223466	ADAMDEC1	NM_021475.2	NM_021475.2		58860	133892417	NM_021475.2	Adamdec1	NP_067450.1	ILMN_1246807	005690047	S	1872	CTACTTTATGTGTTTCTACCAGTCCAGTCAACAGGTCAATAGACATGCTA	14	-	69181934-69181983	14qD2	Mus musculus ADAM-like, decysin 1 (Adamdec1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Dcsn; 2210414L24Rik; AI574231	Dcsn; 2210414L24Rik; AI574231
Mus musculus	RefSeq	ILMN_184189	ILMN_311952	LOC100045967	XR_032154.1	XR_032154.1		100045967	149255983	XR_032154.1	LOC100045967		ILMN_2628271	003170397	S	1295	GGAACCCCCTGGCCAAATAAAGCATGGACCGGAGATCCCTGGAGCCACCA					PREDICTED: Mus musculus hypothetical protein LOC100045967 (LOC100045967), misc RNA.					
Mus musculus	RefSeq	ILMN_231577	ILMN_231577	LOC433722	NM_001081647.1	NM_001081647.1		433722	126032324	NM_001081647.1	LOC433722	NP_001075116.1	ILMN_2952493	002810497	S	535	GGGCACGGTAACCCACCAGCTTCCTATGCACCTTCCCTCTGCATTGATGG	4	+	73316231-73316280		Mus musculus similar to hypothetical protein 4930503F14 (LOC433722), mRNA.					
Mus musculus	RefSeq	ILMN_216538	ILMN_216538	OLFR1346	NM_146916.1	NM_146916.1		258918	22129062	NM_146916.1	Olfr1346	NP_667127.1	ILMN_1247690	005670551	S	630	CATCTTCTGTGGGTCATTGCTGGTTGCTCTGGCCTCTTATGTGGCTATTG	7	+	6427452-6427501	7qA1	Mus musculus olfactory receptor 1346 (Olfr1346), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR103-6	MOR103-6
Mus musculus	RefSeq	ILMN_223070	ILMN_223070	LSM3	NM_026309.1	NM_026309.1		67678	13385805	NM_026309.1	Lsm3	NP_080585.1	ILMN_2837865	003830022	S	275	TATGCTCTTCGTCCGGGGAGATGGCGTCGTTCTAGTCGCCCCTCCATTGA	6	+	91487768-91487817	6qD1	Mus musculus LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm3), mRNA.	A complex composed of three small nuclear ribonucleoproteins, snRNP U4, snRNP U6 and snRNP U5 [goid 46540] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISO]	Interacting selectively with the 3' end of the U6 small nuclear RNA (U6 snRNA) [goid 30629] [evidence ISO]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	USS2; 1010001J12Rik; SMX4; 6030401D18Rik	USS2; 1010001J12Rik; SMX4; 6030401D18Rik
Mus musculus	RefSeq	ILMN_215102	ILMN_250490	OLFR714	NM_147033.1	NM_147033.1		259035	22128882	NM_147033.1	Olfr714	NP_667244.1	ILMN_1245817	004760162	S	870	CTATAGTCTGAGAAATAATGAAGTGAAAAATGCACTCAGCAGAACTTTCC	7	+	114218213-114218262	7qE3	Mus musculus olfactory receptor 714 (Olfr714), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR263-2; P4	MOR263-2; P4
Mus musculus	RefSeq	ILMN_218520	ILMN_218520	FUCA1	NM_024243.3	NM_024243.3		71665	141802500	NM_024243.3	Fuca1	NP_077205.2	ILMN_2696806	002060301	S	2435	CTACCACAAGCATGTGATAGGTTTCTTTCCCTAACTTAGGTTACAGCTTT	4	+	135496158-135496207	4qD3	Mus musculus fucosidase, alpha-L- 1, tissue (Fuca1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: an alpha-L-fucoside + H2O = an alcohol + L-fucose [goid 4560] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	9530055J05Rik; Afuc; Fuca; 0610006A03Rik	9530055J05Rik; Afuc; Fuca; 0610006A03Rik
Mus musculus	RefSeq	ILMN_220123	ILMN_220123	BC030440	NM_173732.2	NM_173732.2		210035	31343470	NM_173732.2	BC030440	NP_776093.1	ILMN_2717890	002470333	S	1280	GATCATGTCACGCTGACTGTCAAGTTGCTCTAAAACCTTAATTTTATTTG	10	+	127131983-127132032	10qD3	Mus musculus cDNA sequence BC030440 (BC030440), mRNA.				MGC40914	MGC40914
Mus musculus	RefSeq	ILMN_217200	ILMN_217200	4933412E14RIK	NM_173778.3	NM_173778.3		244885	141802668	NM_173778.3	4933412E14Rik	NP_776139.1	ILMN_2680238	002450653	S	2404	AATCCTCACCCAACATCGTGAAGCCAACGTTAGCATCTGACACGGAGGGC	9	+	54392472-54392521	9qA5.3	Mus musculus RIKEN cDNA 4933412E14 gene (4933412E14Rik), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213510	ILMN_213510	SPAST	NM_016962.1	NM_016962.1		50850	39930368	NM_016962.1	Spast	NP_058658.1	ILMN_2769210	004880022	S	1838	GACCTTAGAAGCATACATACGCTGGAACAAGGATTTTGGAGACACCACTG	17	+	74787598-74787647	17qE2	Mus musculus spastin (Spast), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	mKIAA1083; Spg4	mKIAA1083; Spg4
Mus musculus	RefSeq	ILMN_213510	ILMN_213510	SPAST	NM_016962.1	NM_016962.1		50850	39930368	NM_016962.1	Spast	NP_058658.1	ILMN_1246027	002480605	S	665	GACGGACGTCTATAACGAGAGTACTAACCTGACATGCCGCAATGGACATC	17	+	74758631-74758680	17qE2	Mus musculus spastin (Spast), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	mKIAA1083; Spg4	mKIAA1083; Spg4
Mus musculus	RefSeq	ILMN_213510	ILMN_213510	SPAST	NM_016962.1	NM_016962.1		50850	39930368	NM_016962.1	Spast	NP_058658.1	ILMN_2637784	002350097	S	1962	ACCCAGACTTCGTTTACAGGACGTTTTAGAGTTTTCATTTTTGTGCACCA	17	+	74787722-74787771	17qE2	Mus musculus spastin (Spast), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	mKIAA1083; Spg4	mKIAA1083; Spg4
Mus musculus	RefSeq	ILMN_213510	ILMN_213510	SPAST	NM_016962.1	NM_016962.1		50850	39930368	NM_016962.1	Spast	NP_058658.1	ILMN_1224658	004070619	S	1819	AACGCAGTGTGAGTCCTCAGACCTTAGAAGCATACATACGCTGGAACAAG	17	+	74787579-74787628	17qE2	Mus musculus spastin (Spast), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	mKIAA1083; Spg4	mKIAA1083; Spg4
Mus musculus	RefSeq	ILMN_195884	ILMN_245690	CDYL	NM_009881.2	NM_009881.2		12593	118129852	NM_009881.2	Cdyl	NP_034011.1	ILMN_2633511	005860386	S	2612	CGCTCTACCTTTCTTACTGTCCCATTCTTACCCAGCCACCGTGAAGAGCC	13	+	35965121-35965170	13qA3.3	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]	AI325931	AI325931
Mus musculus	RefSeq	ILMN_195884	ILMN_245690	CDYL	NM_009881.2	NM_009881.2		12593	118129852	NM_009881.2	Cdyl	NP_034011.1	ILMN_2647931	006130450	S	193	AGAGTCCAGCCTGGAAATACATAGCCCAACCCGAAGGTTATCTCTGAAGG	13	+	35761759-35761808	13qA3.3	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]	AI325931	AI325931
Mus musculus	RefSeq	ILMN_195884	ILMN_245690	CDYL	NM_009881.2	NM_009881.2		12593	118129852	NM_009881.2	Cdyl	NP_034011.1	ILMN_2680574	002470292	S	363	GCAACAGTCTCAGAACCCGATCAAGCGTCCCCTGCAATTCAAGACGCGGA	13	+	35881988-35882037	13qA3.3	Mus musculus chromodomain protein, Y chromosome-like (Cdyl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]	AI325931	AI325931
Mus musculus	RefSeq	ILMN_215757	ILMN_215757	BC022960	XM_136142.6	XM_136142.6		237246	149272521	XM_136142.6	BC022960	XP_136142.5	ILMN_1233534	003370014	S	1776	AGCCATCATATCGAAGACCAAACAGATCGAGGAGGTTTACCTACAATATT	X	+	165807713-165807762	XqF5	PREDICTED: Mus musculus cDNA sequence BC022960 (BC022960), mRNA.					
Mus musculus	RefSeq	ILMN_200013	ILMN_200013	LOC383099	XM_356873.1	XM_356873.1			38079853	XM_356873.1	LOC383099		ILMN_1230327	006860403	S	547	CGCCTCACTCTCAAGCACGACTGGGAGCCTCTGTGCCTTCCAAGGGGCTC										
Mus musculus	Riken	ILMN_202785	ILMN_202785	TMEFF2	ri|4932418H01|PX00017J23|AK030053|2721					AK030053	Tmeff2		ILMN_1260430	000770487	S	2572	TGTGCACTATGGGAGACACCACACACACACTCGGGTCTCTGCTTCATAGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_209758	ILMN_209758	B930007L02RIK	scl36503.7_61	XM_356186.1			38090083	XM_356186.1	B930007L02Rik		ILMN_2598927	003780369	S	5018	GCATTTCTAACGAGGGTCTGAACTTATCCACCAGTCTCCTATCCCCGCAC										
Mus musculus	Riken	ILMN_203651	ILMN_203651	GABRG2	ri|9330180B11|PX00107M18|AK034338|2427					AK034338	Gabrg2		ILMN_2558930	003850470	S	2105	GTAACATAGGTCTTGATAACCCCCTGTTGGGGAAAGTAGTAGAAGAACAC						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]		
Mus musculus	RefSeq	ILMN_243188	ILMN_243188	NPR3	NM_008728.2	NM_008728.2		18162	85702361	NM_008728.2	Npr3	NP_032754.2	ILMN_3127391	002260438	A	6469	ATTGCTGAAACCAAGGGGCTGTGAGCTAAGCATGGCAGAAGGCCAGTCCC	15	-	11770059-11770108	15qA1	Mus musculus natriuretic peptide receptor 3 (Npr3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	stri; NPR-C; lgj; C81222; B430320C24Rik	stri; NPR-C; lgj; C81222; B430320C24Rik
Mus musculus	RefSeq	ILMN_212931	ILMN_212931	ARFRP1	NM_029702.2	NM_029702.2		76688	31542140	NM_029702.2	Arfrp1	NP_083978.2	ILMN_2947031	003830719	S	2357	AAGTTGGGGTGACATTGACTGCAAGCGTAGAATAAAGTCCTGTGTGCAGC				2qH4	Mus musculus ADP-ribosylation factor related protein 1 (Arfrp1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISO]	MGC6837; 1500006I01Rik; AI480700	MGC6837; 1500006I01Rik; AI480700
Mus musculus	RefSeq	ILMN_205944	ILMN_261660	N4BP2	NM_001024917.1	NM_001024917.1		333789	67906815	NM_001024917.1	N4bp2	NP_001020088.1	ILMN_2576381	003310762	S	1225	CTGACCTACCAGGTACAGATGGGGATCAGAAGTCGGCTTCTGCGCCTGAT	5	+	66176729-66176778	5qC3.1	Mus musculus NEDD4 binding protein 2 (N4bp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence ISO]; Catalysis of the reaction: nucleoside 2',3'-cyclic phosphate + H2O = nucleoside 2'-phosphate [goid 4113] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Catalysis of the reaction: ATP + 5'-dephospho-DNA = ADP + 5'-phospho-DNA [goid 46404] [evidence ISO]	Gm868; E430014I16; N4bp2; Gm1791	Gm868; E430014I16; N4bp2; Gm1791
Mus musculus	RefSeq	ILMN_198085	ILMN_261660	N4BP2	NM_001024917.1	NM_001024917.1		333789	67906815	NM_001024917.1	N4bp2	NP_001020088.1	ILMN_2530441	002710138	S	561	ATGGATTGTCTGTTAGAATTGTCTGCCACTGATGCCAAGGGGGCAGAGTC	5	+	66172498-66172547	5qC3.1	Mus musculus NEDD4 binding protein 2 (N4bp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence ISO]; Catalysis of the reaction: nucleoside 2',3'-cyclic phosphate + H2O = nucleoside 2'-phosphate [goid 4113] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Catalysis of the reaction: ATP + 5'-dephospho-DNA = ADP + 5'-phospho-DNA [goid 46404] [evidence ISO]	Gm868; E430014I16; N4bp2; Gm1791	Gm868; E430014I16; N4bp2; Gm1791
Mus musculus	RefSeq	ILMN_261660	ILMN_261660	N4BP2	NM_001024917.1	NM_001024917.1		333789	67906815	NM_001024917.1	N4bp2	NP_001020088.1	ILMN_2978009	006770367	S	5598	AACCTAGAGCCCTGGACTTTGAAGCGTGAGGTTTGTGGGCTGACGTTGGT	5	+	66194252-66194301	5qC3.1	Mus musculus NEDD4 binding protein 2 (N4bp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence ISO]; Catalysis of the reaction: nucleoside 2',3'-cyclic phosphate + H2O = nucleoside 2'-phosphate [goid 4113] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISO]; Catalysis of the reaction: ATP + 5'-dephospho-DNA = ADP + 5'-phospho-DNA [goid 46404] [evidence ISO]	Gm868; E430014I16; N4bp2; Gm1791	Gm868; E430014I16; N4bp2; Gm1791
Mus musculus	RefSeq	ILMN_198249	ILMN_198249	LOC224544	XM_139759.3	XM_139759.3			38083298	XM_139759.3	LOC224544		ILMN_1249253	003360091	S	1551	TACAGTGGTTCTTGCTTTTAAGGGCTCAGCTGTCGCCTTCCACTCTGTCC										
Mus musculus	MEEBO	ILMN_192329	ILMN_192329	ABCC1	scl49396.33_108				6678847	NM_008576	Abcc1		ILMN_1227844	003800747	S	12	GCTGTGTCACAAGTGTCCCAAATACTTCTTGGTAATAAGTGGGGCTGATC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220980	ILMN_220980	CASK	NM_009806.2	NM_009806.2		12361	133504494	NM_009806.2	Cask	NP_033936.2	ILMN_1212894	004890246	S	3797	CATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTGGACA	X	-	13098619-13098668	XqA1.1	Mus musculus calcium/calmodulin-dependent serine protein kinase (MAGUK family) (Cask), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	mLin-2; DXPri1; MGC7449; LIN-2; DXRib1; Pals3	mLin-2; DXPri1; MGC7449; LIN-2; DXRib1; Pals3
Mus musculus	MEEBO	ILMN_184929	ILMN_184929	9845300_5611	9845300_5611						9845300_5611		ILMN_2422761	003290095	S	13	GACGTCCGAGAACTGGGTCATGTTCATCAACAACAAGCGCTGCCGCGACC										
Mus musculus	RefSeq	ILMN_198296	ILMN_198296	LOC333088	XM_285910.2	XM_285910.2			38083713	XM_285910.2	LOC333088		ILMN_1231004	001780376	S	4846	GCAGGACGGCAACGCATCTTGCGGGAACTGCTGGAACAAGTGCATCGAGG										
Mus musculus	RefSeq	ILMN_212583	ILMN_212583	WDR45L	NM_025793.2	NM_025793.2		66840	142353575	NM_025793.2	Wdr45l	NP_080069.2	ILMN_2761879	005310411	S	346	CCCTCCCAACAAAGTGATGATCTGGGATGATCTGAAGAAGAAGACAGTCA	11	-	121199923-121199958:121202428-121202441	11qE2	Mus musculus Wdr45 like (Wdr45l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D16Bwg0193e; AA408735; 0610008N23Rik	D16Bwg0193e; AA408735; 0610008N23Rik
Mus musculus	RefSeq	ILMN_212583	ILMN_212583	WDR45L	NM_025793.2	NM_025793.2		66840	142353575	NM_025793.2	Wdr45l	NP_080069.2	ILMN_1251642	000130402	S	282	ATGTGGAAATGTTATTTCGCTGTAACTATTTAGCTTTAGTTGGTGGTGGA	11	-	121202456-121202505	11qE2	Mus musculus Wdr45 like (Wdr45l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D16Bwg0193e; AA408735; 0610008N23Rik	D16Bwg0193e; AA408735; 0610008N23Rik
Mus musculus	RefSeq	ILMN_212583	ILMN_212583	WDR45L	NM_025793.2	NM_025793.2		66840	142353575	NM_025793.2	Wdr45l	NP_080069.2	ILMN_1242852	005360390	S	77	TATGCGGTGCTGAGGAGCCACAGTCCCTACGACGGCGCCATGAACCTCCT	11	-	121215597-121215607:121215608-121215646	11qE2	Mus musculus Wdr45 like (Wdr45l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D16Bwg0193e; AA408735; 0610008N23Rik	D16Bwg0193e; AA408735; 0610008N23Rik
Mus musculus	RefSeq	ILMN_212583	ILMN_212583	WDR45L	NM_025793.2	NM_025793.2		66840	142353575	NM_025793.2	Wdr45l	NP_080069.2	ILMN_2628053	001770025	S	1983	CAGACTGAAGAGTCTGTGTTTCTGTACCACTTGAGGTATATGTTTAGTTT	11	-	121188790-121188839	11qE2	Mus musculus Wdr45 like (Wdr45l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D16Bwg0193e; AA408735; 0610008N23Rik	D16Bwg0193e; AA408735; 0610008N23Rik
Mus musculus	RefSeq	ILMN_191473	ILMN_191473	TMOD3	NM_016963.2	NM_016963.2		50875	84697033	NM_016963.2	Tmod3	NP_058659.1	ILMN_2479359	000990692	S	3263	CAGACTGTTGGTCATTTCAAGGAGGATGTTTGTGATCCTTAAGTGGCACG	9	-	75345868-75345917	9qD	Mus musculus tropomodulin 3 (Tmod3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISO]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISO]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence ISO]; The binding of a protein or protein complex to the pointed (or minus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51694] [evidence ISO]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]; Interacting selectively with the minus end of a microtubule [goid 51011] [evidence ISO]	UTMOD; U-Tmod	UTMOD; U-Tmod
Mus musculus	RefSeq	ILMN_209131	ILMN_209131	SCT	NM_011328.2	NM_011328.2		20287	148225761	NM_011328.2	Sct	NP_035458.1	ILMN_2592834	005080575	S	445	AGTCTCTAGGACCCTGGCTGGAGTAGGGATTGGTTGTCCTTGGCATCAAT				7qF5	Mus musculus secretin (Sct), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218172	ILMN_218172	4933425L06RIK	NM_025751.3	NM_025751.3		66763	146135034	NM_025751.3	4933425L06Rik	NP_080027.1	ILMN_2692568	005670091	S	1865	GGTAACAGAATCTTGATTGCATGTATCATTCTAGAATTGATGATAATTCT				13qD1	Mus musculus RIKEN cDNA 4933425L06 gene (4933425L06Rik), mRNA.				MGC141320	MGC141320
Mus musculus	RefSeq	ILMN_238078	ILMN_238078	IGFBP5	NM_010518.2	NM_010518.2		16011	70909321	NM_010518.2	Igfbp5	NP_034648.2	ILMN_2964324	005080292	S	5492	GGATAGTACAGTTCAGACAAGACTCCTTCAGATTCCGAGACGCCTACCGG	1	-	72904951-72905000	1qC3	Mus musculus insulin-like growth factor binding protein 5 (Igfbp5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A complex of proteins which includes the insulin-like growth factor (IGF) and a number of IGF-binding proteins. The complex plays a role in growth and development [goid 16942] [evidence IC ]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	IGFBP-5; AW208790; AI256729	IGFBP-5; AW208790; AI256729
Mus musculus	RefSeq	ILMN_190841	ILMN_238078	IGFBP5	NM_010518.2	NM_010518.2		16011	70909321	NM_010518.2	Igfbp5	NP_034648.2	ILMN_1254358	000160100	S	5615	ATTACTGTAGCTCTCTATAGTGTTACGTTCAGACACCGTAGCTCTGTCCT	1	-	72904828-72904877	1qC3	Mus musculus insulin-like growth factor binding protein 5 (Igfbp5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A complex of proteins which includes the insulin-like growth factor (IGF) and a number of IGF-binding proteins. The complex plays a role in growth and development [goid 16942] [evidence IC ]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IPI]	IGFBP-5; AW208790; AI256729	IGFBP-5; AW208790; AI256729
Mus musculus	RefSeq	ILMN_196688	ILMN_242424	DOS	NM_015761.2	NM_015761.2		216164	148886756	NM_015761.2	Dos	NP_056576.1	ILMN_2668236	002120619	S	3005	CCTTGGGCTTTGGACACAACGGACAGAACAGCCCAGGTGGCAGCTTCAAG				10qC1	Mus musculus downstream of Stk11 (Dos), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			R29144/1; 9630008F14; MGC118572	R29144/1; 9630008F14; MGC118572
Mus musculus	Riken	ILMN_203159	ILMN_203159	9130201A12RIK	ri|9130201A12|PX00061E17|AK033609|2144					AK033609	9130201A12Rik		ILMN_2555181	005090471	S	1758	CCTCTGGTGAGAAGACCACTTTGACTGCCTCTGTGGGCAACAAGCACTGC										
Mus musculus	RefSeq	ILMN_197523	ILMN_197523	LOC219228	XM_127786.3	XM_127786.3			38076415	XM_127786.3	LOC219228		ILMN_2528431	003400176	S	2678	GCGATCAGGCGGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGAC										
Mus musculus	RefSeq	ILMN_218588	ILMN_218588	GRHPR	NM_080289.1	NM_080289.1		76238	17933767	NM_080289.1	Grhpr	NP_525028.1	ILMN_2697693	001190446	S	1155	GGCTTGCCACTTTGGGGGCTTGCCACATACTTGCCAAAAGCCTGTAATTC	4	+	45003497-45003546	4qB1	Mus musculus glyoxylate reductase/hydroxypyruvate reductase (Grhpr), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: glycolate + NADP+ = glyoxylate + NADPH + H+ [goid 30267] [evidence IEA]	1110059D05Rik; 6430629L09Rik	1110059D05Rik; 6430629L09Rik
Mus musculus	Riken	ILMN_205416	ILMN_205416	E130009G23RIK	ri|E130009G23|PX00208M03|AK053314|3205					AK053314	E130009G23Rik		ILMN_2572395	005720747	S	2781	GTTAGAGATGGTTGTGAGCCCTCCTGTCAGTGCTGGGAACTAGACCTGGG										
Mus musculus	RefSeq	ILMN_186213	ILMN_258433	ZFP521	NM_181326.3	NM_181326.3		225207	142369361	NM_181326.3	Zfp521	NP_851843.1	ILMN_1256012	001240682	S	1457	CTATGAAGAGACATTCTCACAGAACAGAACCCCACATCTGGATACGGCCC	18	-	13846988-13847037	18qA1	Mus musculus zinc finger protein 521 (Zfp521), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	B930086A16Rik; Evi3	B930086A16Rik; Evi3
Mus musculus	MEEBO	ILMN_187494	ILMN_187494	SAP18	scl2009.1.1_20						Sap18		ILMN_2444626	001090215	S	5	GGCTCTGCATTATCACCACAGCACCTTTTCTGGGTAAAGACTTCTTATTA						Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISA]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence ISA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence ISA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_248899	ILMN_248899	TAF3	NM_027748.2	NM_027748.2		209361	142362642	NM_027748.2	Taf3	NP_082024.1	ILMN_3160989	006250458	S	3339	AAGAAGGTAATGTCCAAATGCCTTGACTGATGGAAGGGCGCATCGGTAGC	2	-	9837602-9837651	2qA1	Mus musculus TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence TAS]	140kDa; 4933439M23Rik; TAFII140; AW539625; mTAFII140; TAF140	140kDa; 4933439M23Rik; TAFII140; AW539625; mTAFII140; TAF140
Mus musculus	RefSeq	ILMN_221053	ILMN_221053	CDT1	NM_026014.3	NM_026014.3		67177	31982545	NM_026014.3	Cdt1	NP_080290.3	ILMN_2730463	001050706	S	1986	GCCTTGCTTCCCCATGAGACTTAAGAATCACACAGACCTTGGACTTTCCT	8	+	125096825-125096874	8qE1	Mus musculus chromatin licensing and DNA replication factor 1 (Cdt1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A signal transduction based surveillance mechanism that prevents the initiation of mitosis until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome [goid 76] [evidence IDA]; A cell cycle process that modulates the frequency, rate or extent of the progression through the S phase of the mitotic cell cycle [goid 7090] [evidence IDA]; Any process that modulates the frequency, rate or extent of initiation of DNA replication; the process by which DNA becomes competent to replicate. In eukaryotes, replication competence is established in early G1 and lost during the ensuing S phase [goid 30174] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW545653; 2610318F11Rik; Ris2; C76791	AW545653; 2610318F11Rik; Ris2; C76791
Mus musculus	RefSeq	ILMN_186229	ILMN_242096	TSPAN2	NM_027533.2	NM_027533.2		70747	70608156	NM_027533.2	Tspan2	NP_081809.2	ILMN_1234698	004120360	S	2823	CCTGTGTGATTACCTCTCTGAGGGTGAAGCTTTCCAAAGAATGTGCTGGG	3	+	102574795-102574844	3qF2.2	Mus musculus tetraspanin 2 (Tspan2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW048009; B230119D02Rik; 6330415F13Rik	AW048009; B230119D02Rik; 6330415F13Rik
Mus musculus	MEEBO	ILMN_196302	ILMN_196302	1700012O15RIK	scl4775.1.1_139						1700012O15Rik		ILMN_2523486	003310202	S	16	TTAACTTAGGGGGGGATGAAGACCCAGAGCCCGGAGCTGCCACCCACCTT										
Mus musculus	RefSeq	ILMN_221355	ILMN_221355	COMMD3	NM_147778.3	NM_147778.3		12238	142348241	NM_147778.3	Commd3	NP_680087.1	ILMN_3163053	006840440	A	590	AATTTGGGGAGGCTGATGACCCCAGGAGCCTAGAGGAAAACCAGACGCGC	2	+	18597552-18597553:18597554-18597601	2qA3	Mus musculus COMM domain containing 3 (Commd3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D2Ertd542e; Bup; AW550818	D2Ertd542e; Bup; AW550818
Mus musculus	RefSeq	ILMN_219177	ILMN_219177	ARVCF	NM_033474.2	NM_033474.2		11877	40254128	NM_033474.2	Arvcf	NP_258435.2	ILMN_2705290	000010386	S	3826	ATGCATTAAAAATGAAACCAAAATAAGACTATCAACAAAAATTGAAATTT	16	+	18400207-18400256	16qA3	Mus musculus armadillo repeat gene deleted in velo-cardio-facial syndrome (Arvcf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209906	ILMN_314563	LOC100044812	XM_001473093.1	XM_001473093.1		100044812	149270282	XM_001473093.1	LOC100044812	XP_001473143.1	ILMN_1252776	006580040	S	644	TCTGACTAGGGCCAGGCAAAGCTCTAAACGGGTGGGGGCTTCTCTGCTAG					PREDICTED: Mus musculus similar to cornichon homolog 2 (Drosophila) (LOC100044812), mRNA.					
Mus musculus	RefSeq	ILMN_211029	ILMN_211029	BC017158	NM_145590.1	NM_145590.1		233913	21704183	NM_145590.1	BC017158	NP_663565.1	ILMN_1249131	004060292	S	2437	GGCCCTGCCCAGTCCCGTGTTTCACCCCAAGTTTTAGGTCTACACCGAGA	7	-	135414966-135415015	7qF3	Mus musculus cDNA sequence BC017158 (BC017158), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC28903	MGC28903
Mus musculus	RefSeq	ILMN_187729	ILMN_252062	ZFP114	NM_001029933.2	NM_001029933.2		232966	113930748	NM_001029933.2	Zfp114	NP_001025104.2	ILMN_2446620	005890736	S	508	CGAGGATGCCAGCTGTCCGGAGAGTCCCACAAACAGCCATTCCAGCATTA	7	+	24965609-24965658	7qA3	Mus musculus zinc finger protein 114 (Zfp114), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Zfp110; Gm1957; MGC107483	Zfp110; Gm1957; MGC107483
Mus musculus	RefSeq	ILMN_187729	ILMN_252062	ZFP114	NM_001029933.2	NM_001029933.2		232966	113930748	NM_001029933.2	Zfp114	NP_001025104.2	ILMN_1219334	000430056	S	920	GTACGTAGTACACATGAGGACACCCCCATTCAACAAAGTGTTCATCCAGG	7	+	24966021-24966070	7qA3	Mus musculus zinc finger protein 114 (Zfp114), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Zfp110; Gm1957; MGC107483	Zfp110; Gm1957; MGC107483
Mus musculus	RefSeq	ILMN_187729	ILMN_252062	ZFP114	NM_001029933.2	NM_001029933.2		232966	113930748	NM_001029933.2	Zfp114	NP_001025104.2	ILMN_2454018	007100736	S	58	TGAAAACTTGGAGCGTCCTGCGGCCCTTCGTGTGTGCTCGTGCTAACGCT	7	+	24960121-24960168:24961128-24961129	7qA3	Mus musculus zinc finger protein 114 (Zfp114), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Zfp110; Gm1957; MGC107483	Zfp110; Gm1957; MGC107483
Mus musculus	RefSeq	ILMN_199485	ILMN_199485	LOC382608	XM_356591.1	XM_356591.1			38050548	XM_356591.1	LOC382608		ILMN_2535384	005130369	S	89	AAGAGAAGCCAGAGCCCAGCGGGGCTGCTAAGAGACCGCGAGTTCAGGAA										
Mus musculus	RefSeq	ILMN_196678	ILMN_256267	KNDC1	NM_177261.4	NM_177261.4		76484	145864472	NM_177261.4	Kndc1	NP_796235.4	ILMN_1247178	006290241	S	3788	CTACGTGAAGGATCTGGAGAGGCAGAAGACCAACGGGCACACAGAACTGG				7qF4	Mus musculus kinase non-catalytic C-lobe domain (KIND) containing 1 (Kndc1), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex that stimulates the exchange of guanyl nucleotides by a GTPase [goid 32045] [evidence IDA]	Any process that modulates the frequency, rate or extent of dendrite development [goid 50773] [evidence IDA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IDA]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	KIAA1768; 2410012C07Rik; B830014K08Rik; very-kind; VKIND	KIAA1768; 2410012C07Rik; B830014K08Rik; very-kind; VKIND
Mus musculus	RefSeq	ILMN_221581	ILMN_256267	KNDC1	NM_177261.4	NM_177261.4		76484	145864472	NM_177261.4	Kndc1	NP_796235.4	ILMN_1235258	006560086	S	5361	ATGGAAGGAAGGCGCTTCCGGGCCCAGCCTACTCTACCCTCCGCCCACCT				7qF4	Mus musculus kinase non-catalytic C-lobe domain (KIND) containing 1 (Kndc1), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex that stimulates the exchange of guanyl nucleotides by a GTPase [goid 32045] [evidence IDA]	Any process that modulates the frequency, rate or extent of dendrite development [goid 50773] [evidence IDA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IDA]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	KIAA1768; 2410012C07Rik; B830014K08Rik; very-kind; VKIND	KIAA1768; 2410012C07Rik; B830014K08Rik; very-kind; VKIND
Mus musculus	RefSeq	ILMN_221581	ILMN_256267	KNDC1	NM_177261.4	NM_177261.4		76484	145864472	NM_177261.4	Kndc1	NP_796235.4	ILMN_1235620	004570465	S	3880	AGAGAAACTATAGGAAGACCCTGAAGTTTTACCAGAAACTCTTACAGAAG				7qF4	Mus musculus kinase non-catalytic C-lobe domain (KIND) containing 1 (Kndc1), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex that stimulates the exchange of guanyl nucleotides by a GTPase [goid 32045] [evidence IDA]	Any process that modulates the frequency, rate or extent of dendrite development [goid 50773] [evidence IDA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IDA]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	KIAA1768; 2410012C07Rik; B830014K08Rik; very-kind; VKIND	KIAA1768; 2410012C07Rik; B830014K08Rik; very-kind; VKIND
Mus musculus	RefSeq	ILMN_221581	ILMN_256267	KNDC1	NM_177261.4	NM_177261.4		76484	145864472	NM_177261.4	Kndc1	NP_796235.4	ILMN_2757844	006960376	S	7207	GTGGGGAAAGTGAACAGGCTTTTGGCTTCAGCACTGTTTGCATGGCGCCC				7qF4	Mus musculus kinase non-catalytic C-lobe domain (KIND) containing 1 (Kndc1), mRNA.	A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex that stimulates the exchange of guanyl nucleotides by a GTPase [goid 32045] [evidence IDA]	Any process that modulates the frequency, rate or extent of dendrite development [goid 50773] [evidence IDA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of dendrite morphogenesis [goid 48814] [evidence IDA]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	KIAA1768; 2410012C07Rik; B830014K08Rik; very-kind; VKIND	KIAA1768; 2410012C07Rik; B830014K08Rik; very-kind; VKIND
Mus musculus	RefSeq	ILMN_197640	ILMN_197640	LOC381470	XM_355428.1	XM_355428.1			38077053	XM_355428.1	LOC381470		ILMN_2528839	004900047	S	382	CTGCTATCATCTGAACTTTTGATCTTAGCCATTCTGACTGGAGTGAGGTG										
Mus musculus	Riken	ILMN_203622	ILMN_203622	B630006N21RIK	ri|B630006N21|PX00072J21|AK046749|2792					AK046749	B630006N21Rik		ILMN_2558710	004230767	S	2267	CATCTTGCCTGGCTTAGCTTGCACAGGTCTGGTATATTCCACTGTGAGTT										
Mus musculus	RefSeq	ILMN_214054	ILMN_214054	MMP20	NM_013903.2	NM_013903.2		30800	118130938	NM_013903.2	Mmp20	NP_038931.1	ILMN_1251385	003310386	S	2721	GACTGTTGAAGACAATATCTGGTATCTTTGCTGTCTAAGCTCAAGGTGCC	9	+	7674413-7674462	9qA1	Mus musculus matrix metallopeptidase 20 (enamelysin) (Mmp20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218307	ILMN_218307	CD97	NM_011925.1	NM_011925.1		26364	6753359	NM_011925.1	Cd97	NP_036055.1	ILMN_2814168	004670753	S	2596	AAACCCAGCAATGAGCCCTGCCACGGGGCAAGGGGTCGCTGGTCCTGCTT	8	-	86247615-86247664	8qC2	Mus musculus CD97 antigen (Cd97), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AA409984; TM7LN1	AA409984; TM7LN1
Mus musculus	RefSeq	ILMN_218307	ILMN_218307	CD97	NM_011925.1	NM_011925.1		26364	6753359	NM_011925.1	Cd97	NP_036055.1	ILMN_2694170	000990280	S	2374	ACTGGAAATGGGCCTGCATGGTCACTGGGAGCAAGTACACAGAGTTCAAC	8	-	86247913-86247962	8qC2	Mus musculus CD97 antigen (Cd97), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AA409984; TM7LN1	AA409984; TM7LN1
Mus musculus	RefSeq	ILMN_218307	ILMN_218307	CD97	NM_011925.1	NM_011925.1		26364	6753359	NM_011925.1	Cd97	NP_036055.1	ILMN_2694175	002810632	S	2374	CTGGAAATGGGCCTGCATGGTCACTGGGAGCAAGTACACAGAGTTCAACT	8	-	86247913-86247962	8qC2	Mus musculus CD97 antigen (Cd97), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AA409984; TM7LN1	AA409984; TM7LN1
Mus musculus	Riken	ILMN_205630	ILMN_205630	4930488I03RIK	ri|4930488I03|PX00032F15|AK029708|3077					AK029708	4930488I03Rik		ILMN_1218897	004120678	S	2916	GTAGGCAACTCTGTGGGATACATAAGAAAGCAAACCGAGCAGTGAGGAGC										
Mus musculus	RefSeq	ILMN_215411	ILMN_215411	CIB2	NM_019686.3	NM_019686.3		56506	31581585	NM_019686.3	Cib2	NP_062660.1	ILMN_2744587	006840634	S	800	TTTCCAAGTGCTCCAGGGAAGGAGCTGTGGCCTCTGGGGTTCTCACCCAT	9	-	54343483-54343532	9qA5.3	Mus musculus calcium and integrin binding family member 2 (Cib2), mRNA.		Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AI449053; 2810434I23Rik	AI449053; 2810434I23Rik
Mus musculus	RefSeq	ILMN_210810	ILMN_321003	SCGB1C1	NM_001099742.1	NM_001099742.1		338417	153791539	NM_001099742.1	Scgb1c1	NP_001093212.1	ILMN_2609421	007000328	S	341	CCAGCCCTACAGCGACCATGGATGTGCCGCGATCACTGCTTCTTCACGAA				7qF5	Mus musculus secretoglobin, family 1C, member 1 (Scgb1c1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ryd5	Ryd5
Mus musculus	RefSeq	ILMN_218685	ILMN_256895	ARPC2	NM_029711.1	NM_029711.1		76709	112363071	NM_029711.1	Arpc2	NP_083987.1	ILMN_2698958	002190564	S	1294	GGTTCCATTTTGTACGAGTTTGGCAAATAACCTGCAGAAACGAGCTGTGC	1	+	74314484-74314533	1qC3	Mus musculus actin related protein 2/3 complex, subunit 2 (Arpc2), mRNA. XM_129773 XM_901710 XM_901712 XM_901713 XM_922647 XM_922652 XM_922657 XM_989557	Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	MGC141099; 34kDa; 2210023N03Rik; p34-Arc	MGC141099; 34kDa; 2210023N03Rik; p34-Arc
Mus musculus	RefSeq	ILMN_219098	ILMN_219098	TMEM161A	NM_145597.2	NM_145597.2		234371	31542193	NM_145597.2	Tmem161a	NP_663572.1	ILMN_2806740	001470594	S	2879	GTATAGCTGATGACTCCAGAGGTAGTTGGGCCAGCCAGTGCTATGCAAGA	8	+	72707445-72707494	8qB3.3	Mus musculus transmembrane protein 161A (Tmem161a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			BB161850; MGC29210; BC021367; AI428876	BB161850; MGC29210; BC021367; AI428876
Mus musculus	MEEBO	ILMN_221965	ILMN_221965	E130113K08RIK	scl077864.1_4	XM_126366.2			28510854	XM_126366.2	E130113K08Rik		ILMN_2742757	006760204	S	823	ATCAACTTAGGGGCCTTGCCATCAGGGGTCATCCTCCCACCCTGACACCA										
Mus musculus	RefSeq	ILMN_184762	ILMN_228192	4930522O17RIK	XM_898933.3	XM_898933.3		78180	149252392	XM_898933.3	4930522O17Rik	XP_904026.2	ILMN_2421363	005890725	S	373	CTTCTGTGAGGTCCATACCCAGTGACTCAGGCAATAGAAGAAATTGGGAG	4	+	53263913-53263921:53263922-53263962	4qB2	PREDICTED: Mus musculus RIKEN cDNA 4930522O17 gene (4930522O17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_256652	ILMN_256652	OLFR963	NM_001011827.1	NM_001011827.1		258087	58801417	NM_001011827.1	Olfr963	NP_001011827.1	ILMN_2959701	002850687	S	547	TTACCTCTAGCCTGTGAGGACCACTCTCTAGCACAGAGGGTAGGCTTTAC	9	+	39477190-39477239	9qA5.1	Mus musculus olfactory receptor 963 (Olfr963), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR224-7P; MOR224-13	MOR224-7P; MOR224-13
Mus musculus	RefSeq	ILMN_186528	ILMN_311870	LOC100041128	XM_001475846.1	XM_001475846.1		100041128	149260305	XM_001475846.1	LOC100041128	XP_001475896.1	ILMN_2436293	001570653	S	2574	TGTCAAGTGAGAAGTGAAATAAGTAGTTCTTTGTGTGCCTGTACTGATAG	9	-	106689611-106689660	9qF1	PREDICTED: Mus musculus similar to TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor (LOC100041128), mRNA.					
Mus musculus	Riken	ILMN_205858	ILMN_205858	A830099B21RIK	ri|A830099B21|PX00157C15|AK044195|3269					AK044195	A830099B21Rik		ILMN_1237902	001230020	S	2928	TGCAGGTTAGGAGATGAGGGGTAGTTACAAACCAGGGCAGGGGAGCCTTC										
Mus musculus	RefSeq	ILMN_193056	ILMN_259987	1190003K10RIK	XM_893191.2	XM_893191.2		68880	94395203	XM_893191.2	1190003K10Rik	XP_898284.1	ILMN_2493688	003890379	S	504	GGAGAGGCTGGAGAAGAGGCTGAGAATGCTGGATAATCCTGATGACAAGG	13	-	64583097-64583146	13qB3	PREDICTED: Mus musculus RIKEN cDNA 1190003K10 gene (1190003K10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_257506	ILMN_257506	LOC625360	NM_001037925.1	NM_001037925.1		625360	85702323	NM_001037925.1	LOC625360	NP_001033014.1	ILMN_2845658	005670156	S	1240	GTGAGTGTCAGAGGGAGTCACAAGTGTCCCCAGGAGATGTGGAAAACAAC	Un|NT_053651.2	-	12844-12893		Mus musculus similar to 2-cell-stage, variable group, member 3 (LOC625360), mRNA.					
Mus musculus	RefSeq	ILMN_245270	ILMN_245270	LOC434635	NM_001013819.1	NM_001013819.1		434635	85701501	NM_001013819.1	LOC434635	NP_001013841.1	ILMN_2996445	002120670	S	222	AAGCGGCAGCCACGGCCCCACCACCTCCACCAGACTATCACCATCACCAT	Un	+	11032-11081		Mus musculus similar to mastermind-like 2; mastermind (Drosophila)-like 2 (LOC434635), mRNA.					
Mus musculus	RefSeq	ILMN_217205	ILMN_238236	2310057J16RIK	NM_027171.2	NM_027171.2		69697	142352970	NM_027171.2	2310057J16Rik	NP_081447.1	ILMN_1235207	005570722	S	3678	AGACAGAGGAGCTATCGAGGCTGGCAGGCTATGGGCCTCGGACCGTCACT	8	+	3608686-3608735	8qA1.1	Mus musculus RIKEN cDNA 2310057J16 gene (2310057J16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_214151	ILMN_215395	IRF6	NM_016851.2	NM_016851.2		54139	114145466	NM_016851.2	Irf6	NP_058547.2	ILMN_2695883	007650189	S	725	GGGCAACTGCAGTGTGGGAAACTGCAGCCCCGAATCAGTGTGGCCCAAAA	1	+	194991985-194992034	1qH6	Mus musculus interferon regulatory factor 6 (Irf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IGI]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	E230028I05Rik; mirf6; AI876454	E230028I05Rik; mirf6; AI876454
Mus musculus	RefSeq	ILMN_215395	ILMN_215395	IRF6	NM_016851.2	NM_016851.2		54139	114145466	NM_016851.2	Irf6	NP_058547.2	ILMN_1216279	007210072	S	3677	GCTCCCATTCACTCTCCAGCTGTCTTCTTCCTGCCTTCATTTGAAGACTC	1	+	194997782-194997831	1qH6	Mus musculus interferon regulatory factor 6 (Irf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IGI]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	E230028I05Rik; mirf6; AI876454	E230028I05Rik; mirf6; AI876454
Mus musculus	RefSeq	ILMN_215395	ILMN_215395	IRF6	NM_016851.2	NM_016851.2		54139	114145466	NM_016851.2	Irf6	NP_058547.2	ILMN_2734263	004390040	S	3785	CTCCAATGTTAAAAGAACCACTACAGATAAACCCTGAAGGCAGATGCTGA	1	+	194997890-194997939	1qH6	Mus musculus interferon regulatory factor 6 (Irf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IGI]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	E230028I05Rik; mirf6; AI876454	E230028I05Rik; mirf6; AI876454
Mus musculus	MEEBO	ILMN_220322	ILMN_220322	2510016D11RIK	scl26115.1.3_122	XM_149660.1			20841630	XM_149660.1	2510016D11Rik		ILMN_2720565	003130224	S	724	AGGGGCTTCTCGCCACCAACCAGCAAACAACGCTAGAGTGGACGCTGACT										
Mus musculus	RefSeq	ILMN_219503	ILMN_219503	LRRC19	NM_175305.4	NM_175305.4		100061	146198866	NM_175305.4	Lrrc19	NP_780514.1	ILMN_1238743	005700711	S	2680	GGAACACAGGTAGAAATGTGACAACAGACCTTGGTACATGATACACGAGC				4qC5	Mus musculus leucine rich repeat containing 19 (Lrrc19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW261791; AI314124; AL022954; 9130022A01Rik	AW261791; AI314124; AL022954; 9130022A01Rik
Mus musculus	RefSeq	ILMN_208778	ILMN_208778	SLC20A1	NM_015747.1	NM_015747.1		20515	7657578	NM_015747.1	Slc20a1	NP_056562.1	ILMN_2589412	004920138	S	2778	GCCTCAATTCCAGTATGTTTTAATGTTGTCTGTGAGATAACTTAGGTGGG	2	+	129036850-129036899	2qF1	Mus musculus solute carrier family 20, member 1 (Slc20a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 5315] [evidence IEA]	Glvr-1; AI607883; Glvr1	Glvr-1; AI607883; Glvr1
Mus musculus	Riken	ILMN_206263	ILMN_206263	FECH	ri|D030045D18|PX00180D13|AK083560|3554					AK083560	Fech		ILMN_1252066	004200619	S	3195	AGATGGGTGGTCTCAGTGGTCTCAGGGGGAAGGTTAGGGGGGACTGTAGT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence TAS]	The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group [goid 6779] [evidence IMP]; The series of events in which an ultraviolet radiation (UV light) stimulus is received by a cell and converted into a molecular signal. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9589] [evidence IMP]; The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence TAS]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the reaction: protoporphyrin + Fe2+ = protoheme + 2 H+ [goid 4325] [evidence IDA]		
Mus musculus	RefSeq	ILMN_194176	ILMN_258969	SUHW4	NM_146224.4	NM_146224.4		235469	110835724	NM_146224.4	Suhw4	NP_666336.3	ILMN_1218743	001770356	S	4116	AATTAGCCTAATTTATCAGCTATTAAGTTGATTTTTAGATATAGAAATGA	9	+	72211333-72211382	9qD	Mus musculus suppressor of hairy wing homolog 4 (Drosophila) (Suhw4), mRNA.				MGC36902; ZNF634; A930005F02Rik; BC027163	MGC36902; ZNF634; A930005F02Rik; BC027163
Mus musculus	RefSeq	ILMN_258969	ILMN_258969	SUHW4	NM_146224.4	NM_146224.4		235469	110835724	NM_146224.4	Suhw4	NP_666336.3	ILMN_2841334	001990132	S	3801	AGTCAGTGTATAAGCTGTGCAGAACCCCACCTCAGCCCCCATGAACTAGT	9	+	72211018-72211067	9qD	Mus musculus suppressor of hairy wing homolog 4 (Drosophila) (Suhw4), mRNA.				MGC36902; ZNF634; A930005F02Rik; BC027163	MGC36902; ZNF634; A930005F02Rik; BC027163
Mus musculus	RefSeq	ILMN_229423	ILMN_229423	OTTMUSG00000005737	NM_001045542.1	NM_001045542.1		624860	113865924	NM_001045542.1	OTTMUSG00000005737	NP_001039007.1	ILMN_2977076	004050390	S	739	CCCCGCCATGACGGTTATGGAGTTATCCTCTGGAACTGTGAGCCCCCAAT	11	+	58254507-58254556	11qB1.3	Mus musculus predicted gene, OTTMUSG00000005737 (OTTMUSG00000005737), mRNA.					
Mus musculus	RefSeq	ILMN_201877	ILMN_236151	NOL8	NM_001081350.1	NM_001081350.1		70930	124486812	NM_001081350.1	Nol8	NP_001074819.1	ILMN_1243184	004920719	S	1601	TGAGTCTCACTTTGGCTGACTTGGAGCAGTTGGCTGGCAGTCATCGGAAG	13	+	49757222-49757271	13qA5	Mus musculus nucleolar protein 8 (Nol8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D13Ertd548e; 5730412B09Rik; 4921532D18Rik	D13Ertd548e; 5730412B09Rik; 4921532D18Rik
Mus musculus	RefSeq	ILMN_209817	ILMN_236151	NOL8	NM_001081350.1	NM_001081350.1		70930	124486812	NM_001081350.1	Nol8	NP_001074819.1	ILMN_1222173	001510017	S	3962	CCCCACCTCAGAACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGC	13	+	49774104-49774153	13qA5	Mus musculus nucleolar protein 8 (Nol8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	D13Ertd548e; 5730412B09Rik; 4921532D18Rik	D13Ertd548e; 5730412B09Rik; 4921532D18Rik
Mus musculus	RefSeq	ILMN_220458	ILMN_220458	C030039L03RIK	NM_198417.1	NM_198417.1		112415	38259209	NM_198417.1	C030039L03Rik	NP_940809.1	ILMN_2722290	005420594	S	4298	GTGGAAAGTTACCCAATTCTATGAACCAGAGGTAAAGCTGCCCTTGCTAA	7	+	28491209-28491258	7qA3	Mus musculus RIKEN cDNA C030039L03 gene (C030039L03Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214708	ILMN_214708	A530082C11RIK	NM_177186.4	NM_177186.4		320541	144922680	NM_177186.4	A530082C11Rik	NP_796160.1	ILMN_2691832	006510661	S	6080	CCACAGTTTAGGGTGGACAATTGTCTGCATCAAAGCCAAGTCATATTTGC	4	+	154997238-154997287	4qE2	Mus musculus RIKEN cDNA A530082C11 gene (A530082C11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI957035; SLC35E2	AI957035; SLC35E2
Mus musculus	RefSeq	ILMN_214708	ILMN_214708	A530082C11RIK	NM_177186.4	NM_177186.4		320541	144922680	NM_177186.4	A530082C11Rik	NP_796160.1	ILMN_1242542	005700086	S	2586	GGACAACAGTGGGCCTTGGGTTAACACGCTGAGGTTCTACATTATTCGGC	4	+	154993744-154993793	4qE2	Mus musculus RIKEN cDNA A530082C11 gene (A530082C11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI957035; SLC35E2	AI957035; SLC35E2
Mus musculus	Riken	ILMN_204919	ILMN_204919	C230004E12RIK	ri|C230004E12|PX00173I18|AK048684|1755					AK048684	C230004E12Rik		ILMN_1244331	006180767	S	1535	CTGTGAGCATTGAGCAGCCTTTACCTCAGAACCCCTGGATACCCCAGCCC										
Mus musculus	RefSeq	ILMN_219731	ILMN_320088	2810055G20RIK	XM_001480474.1	XM_001480474.1		77994	149268017	XM_001480474.1	2810055G20Rik	XP_001480524.1	ILMN_2712892	004230138	S	179	ACTATGGAGAGATCCTTCAAAACCCGTCGGGACGAATAACAGATGAATTC				16qC3.1	PREDICTED: Mus musculus RIKEN cDNA 2810055G20 gene (2810055G20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_209605	ILMN_209605	SPNB2	NM_175836.2	NM_175836.2		20742	117938331	NM_175836.2	Spnb2	NP_787030.2	ILMN_2681429	006580524	S	6724	TGTCATAAATAACCAAGAAATGGGCTTCTATAAAGATGCCAAGAGTGCTG	11	-	30003350-30003399	11qA3.3	Mus musculus spectrin beta 2 (Spnb2), transcript variant 1, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA];  [goid 7182] [evidence IDA];  [goid 7184] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik
Mus musculus	RefSeq	ILMN_209605	ILMN_209605	SPNB2	NM_175836.2	NM_175836.2		20742	117938331	NM_175836.2	Spnb2	NP_787030.2	ILMN_1244992	006180538	S	6647	GGCTTCCTCAATCGGAAGCATGAGTGGGAGGCCCACAATAAGAAAGCCTC	11	-	30004441-30004490	11qA3.3	Mus musculus spectrin beta 2 (Spnb2), transcript variant 1, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA];  [goid 7182] [evidence IDA];  [goid 7184] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik
Mus musculus	RefSeq	ILMN_209605	ILMN_209605	SPNB2	NM_175836.2	NM_175836.2		20742	117938331	NM_175836.2	Spnb2	NP_787030.2	ILMN_1214394	000650630	S	7009	ATCCAGTCGGGCGCAGACCTTACCCACCAGCGTCGTCACCATCACCAGCG	11	-	30000575-30000624	11qA3.3	Mus musculus spectrin beta 2 (Spnb2), transcript variant 1, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA];  [goid 7182] [evidence IDA];  [goid 7184] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik
Mus musculus	RefSeq	ILMN_209605	ILMN_209605	SPNB2	NM_175836.2	NM_175836.2		20742	117938331	NM_175836.2	Spnb2	NP_787030.2	ILMN_2610865	001780309	S	51	CGACCACGGTAGCCACAGACTATGACAACATTGAGATCCAGCAGCAGTAC	11	-	30119672-30119721	11qA3.3	Mus musculus spectrin beta 2 (Spnb2), transcript variant 1, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA];  [goid 7182] [evidence IDA];  [goid 7184] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik	AL033301; elf1; mKIAA4049; Spnb-2; elf3; SPTB2; SPTBN1; KIAA4049; 9930031C03Rik
Mus musculus	RefSeq	ILMN_217635	ILMN_217635	RGS9BP	NM_145840.2	NM_145840.2		243923	40556382	NM_145840.2	Rgs9bp	NP_665839.1	ILMN_2795473	000430026	S	6191	GTGGGAGGTTCAGGGAGTTTTCCCTGCAGGACTACGAGAGAGAAGACACC	7	-	36364323-36364372	7qB2	Mus musculus regulator of G-protein signalling 9 binding protein (Rgs9bp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The series of events involved in visual perception in which a sensory light stimulus is received by a cell and converted into a molecular signal [goid 50908] [evidence IMP]		Rgs9-1bp; R9AP	Rgs9-1bp; R9AP
Mus musculus	RefSeq	ILMN_212939	ILMN_212939	GEMIN6	NM_026053.3	NM_026053.3		67242	146135080	NM_026053.3	Gemin6	NP_080329.1	ILMN_2641340	005820064	S	735	CGTTTGGTTTTGTATTCAATTCTTCCAATGTAAGTTGATTATATTACAAG				17qE3	Mus musculus gem (nuclear organelle) associated protein 6 (Gemin6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2810470M17Rik; 2610019B15Rik	2810470M17Rik; 2610019B15Rik
Mus musculus	RefSeq	ILMN_219363	ILMN_219363	CYP4F39	NM_177307.3	NM_177307.3		320997	142361891	NM_177307.3	Cyp4f39	NP_796281.1	ILMN_1221376	005570292	S	2459	ATCTCATCCGGTCCTAGATTTGGAGCCCAAGGTGGGGAGGTGGGCCTCTT	17	+	32630106-32630155	17qB1	Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 39 (Cyp4f39), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate + NADPH + H2O = (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-trihydroxyicosa-6,8,10,14-tetraenoate + NADP+ + H2O [goid 50051] [evidence IEA]	4732474A20Rik	4732474A20Rik
Mus musculus	Riken	ILMN_202243	ILMN_202243	4930449I04RIK	ri|4930449I04|PX00031A14|AK015432|1122					AK015432	4930449I04Rik		ILMN_1238088	002120138	S	884	GTCACAGGGGACCAAGAGCTTGTAAGCCATCCAGAGTTTACAGAGAAGTG										
Mus musculus	RefSeq	ILMN_210158	ILMN_210158	CDK5RAP1	NM_025876.2	NM_025876.2		66971	118130251	NM_025876.2	Cdk5rap1	NP_080152.1	ILMN_1249441	001050711	S	1619	GACCTTTGTGGCCGGAATGATGCAAACCTTAAGGTGATTTTCCCTGACGC	2	-	154168106-154168155	2qH1	Mus musculus CDK5 regulatory subunit associated protein 1 (Cdk5rap1), mRNA.			Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2310066P17Rik	2310066P17Rik
Mus musculus	RefSeq	ILMN_210158	ILMN_210158	CDK5RAP1	NM_025876.2	NM_025876.2		66971	118130251	NM_025876.2	Cdk5rap1	NP_080152.1	ILMN_2604985	002810221	S	72	GGTGTGTCCTCCAAGTACAGAGGTTGTCAGCACCATTCACCTCCATGTGC	2	-	154196609-154196658	2qH1	Mus musculus CDK5 regulatory subunit associated protein 1 (Cdk5rap1), mRNA.			Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2310066P17Rik	2310066P17Rik
Mus musculus	RefSeq	ILMN_210158	ILMN_210158	CDK5RAP1	NM_025876.2	NM_025876.2		66971	118130251	NM_025876.2	Cdk5rap1	NP_080152.1	ILMN_2602821	003360753	S	1779	TCTGCAGGACCACTATGAAAGACTCATTGACGTATTGCACGACCTGAGCT	2	-	154161263-154161266:154161267-154161312	2qH1	Mus musculus CDK5 regulatory subunit associated protein 1 (Cdk5rap1), mRNA.			Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2310066P17Rik	2310066P17Rik
Mus musculus	RefSeq	ILMN_191797	ILMN_232966	DNM3OS	NR_002870.1	NR_002870.1		474332	84872167	NR_002870.1	Dnm3os		ILMN_2482263	000070408	S	4496	CGTGTGCTTCTGTCCAACACTTCAGAGCACAAGAGCTTGGCTGCTATTCA	1	+	164152249-164152298	1qH2.1	Mus musculus dynamin 3, opposite strand (Dnm3os), non-coding RNA.				Hag2; 6030416H16Rik; Npn1; P/L01	Hag2; 6030416H16Rik; Npn1; P/L01
Mus musculus	RefSeq	ILMN_210727	ILMN_232966	DNM3OS	NR_002870.1	NR_002870.1		474332	84872167	NR_002870.1	Dnm3os		ILMN_1255731	002750239	S	5081	CATGGTCTCACCCTGCTTGTTAATCAAGGGGGATAGAAGCTTATGAACTC	1	+	164152834-164152883	1qH2.1	Mus musculus dynamin 3, opposite strand (Dnm3os), non-coding RNA.				Hag2; 6030416H16Rik; Npn1; P/L01	Hag2; 6030416H16Rik; Npn1; P/L01
Mus musculus	RefSeq	ILMN_232966	ILMN_232966	DNM3OS	NR_002870.1	NR_002870.1		474332	84872167	NR_002870.1	Dnm3os		ILMN_2825866	006040537	S	7479	CACAGTGTCCCAGTCAGAACACGAAGGAACTGGGGGTTAACAGGGATATC	1	+	164155232-164155281	1qH2.1	Mus musculus dynamin 3, opposite strand (Dnm3os), non-coding RNA.				Hag2; 6030416H16Rik; Npn1; P/L01	Hag2; 6030416H16Rik; Npn1; P/L01
Mus musculus	MEEBO	ILMN_187011	ILMN_187011	ENSA	scl22877.5_401				9624978	NM_019561	Ensa		ILMN_2763294	006560544	S	276	ACCGGTGACCACATCCCCACCCCACAGGATCTGCCCCAGAGAAAGTCCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence ISO]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence ISO];  [goid 19870] [evidence ISO]		
Mus musculus	RefSeq	ILMN_250782	ILMN_250782	MBP	NM_001025245.1	NM_001025245.1		17196	69885017	NM_001025245.1	Mbp	NP_001020416.1	ILMN_3081854	004540136	A	793	GACACGGGCATCCTTGACTCCATCGGGCGCTTCTTTAGCGGTGACAGGGG	18	+	82724068-82724117	18qE3	Mus musculus myelin basic protein (Mbp), transcript variant 8, mRNA.	An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath [goid 33269] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]	mld; shi; R75289; C76307; golli-mbp; Hmbpr	mld; shi; R75289; C76307; golli-mbp; Hmbpr
Mus musculus	RefSeq	ILMN_250782	ILMN_250782	MBP	NM_001025245.1	NM_001025245.1		17196	69885017	NM_001025245.1	Mbp	NP_001020416.1	ILMN_3011353	002810288	I	4610	CCACTGACACTGGAATAGGAATGTGATGGGCGTCGCACCCTCTGTAAATG	18	+	82727885-82727934	18qE3	Mus musculus myelin basic protein (Mbp), transcript variant 8, mRNA.	An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An axon part that is located between the nodes of Ranvier and surrounded by compact myelin sheath [goid 33269] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]	mld; shi; R75289; C76307; golli-mbp; Hmbpr	mld; shi; R75289; C76307; golli-mbp; Hmbpr
Mus musculus	RefSeq	ILMN_192773	ILMN_192773	ZIC1	NM_009573.3	NM_009573.3		22771	70778755	NM_009573.3	Zic1	NP_033599.2	ILMN_2491186	002760537	S	2894	GTCAAGAATTCGTATAGTACGAGCCTGGATCTACGTGTCAAACTGTTCCA	9	-	91255589-91255638	9qE3.3	Mus musculus zinc finger protein of the cerebellum 1 (Zic1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IDA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence NAS]; Any process that modulates the frequency, rate or extent of smoothened signaling [goid 8589] [evidence IPI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ZNF201; ZIC	ZNF201; ZIC
Mus musculus	RefSeq	ILMN_237158	ILMN_237158	MBNL2	NM_175341.3	NM_175341.3		105559	46411183	NM_175341.3	Mbnl2	NP_780550.1	ILMN_3094013	002710142	A	4293	TCTCAGTTCAACAGCTCCGGTAGTTAGGGAACTAACTCCACTTGCACAGG	14	+	119566618-119566667	14qE4	Mus musculus muscleblind-like 2 (Mbnl2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI849185; 1110002M11Rik; mKIAA4072; AI837313; MBLL; AL118326; AI047808; R75232; KIAA4072	AI849185; 1110002M11Rik; mKIAA4072; AI837313; MBLL; AL118326; AI047808; R75232; KIAA4072
Mus musculus	RefSeq	ILMN_192691	ILMN_192691	PSMG2	NM_134138.1	NM_134138.1		107047	19527371	NM_134138.1	Psmg2	NP_598899.1	ILMN_3153450	002940730	A	551	CCTGAACTGGCTAGAAATGGAAAAGAGTCGGTGCATCCCTGAGATGAGCG	18	+	67808490-67808539	18qE1	Mus musculus proteasome (prosome, macropain) assembly chaperone 2 (Psmg2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]		1700017I17Rik; Clast3; AW545363	1700017I17Rik; Clast3; AW545363
Mus musculus	RefSeq	ILMN_192691	ILMN_192691	PSMG2	NM_134138.1	NM_134138.1		107047	19527371	NM_134138.1	Psmg2	NP_598899.1	ILMN_1224609	001710202	S	1	TGCTGTACAGAAATTTGTGCTACCCGGGGATGGGTTAGAAGTGATATTGT	18	+	67801253-67801302	18qE1	Mus musculus proteasome (prosome, macropain) assembly chaperone 2 (Psmg2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]		1700017I17Rik; Clast3; AW545363	1700017I17Rik; Clast3; AW545363
Mus musculus	RefSeq	ILMN_192691	ILMN_192691	PSMG2	NM_134138.1	NM_134138.1		107047	19527371	NM_134138.1	Psmg2	NP_598899.1	ILMN_3074516	003850471	I	812	TTGGAAGATCCCCAGCTCTTGGCGGCTGCTCTTTGGCAGTGGGCTTCCTC	18	+	67813569-67813618	18qE1	Mus musculus proteasome (prosome, macropain) assembly chaperone 2 (Psmg2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IDA]		1700017I17Rik; Clast3; AW545363	1700017I17Rik; Clast3; AW545363
Mus musculus	RefSeq	ILMN_216554	ILMN_312682	LOC100041290	XM_001476109.1	XM_001476109.1		100041290	149252875	XM_001476109.1	LOC100041290	XP_001476159.1	ILMN_1248210	007550609	S	954	GGAACTTGTGCTTTCCCACAGTTACAGTGTCCTGATGTTTCCTGGATGGG	4	+	118299558-118299591:118299592-118299607	4qD2.1	PREDICTED: Mus musculus hypothetical protein LOC100041290 (LOC100041290), mRNA.					
Mus musculus	RefSeq	ILMN_197324	ILMN_197324	LOC381383	XM_355347.1	XM_355347.1			38075141	XM_355347.1	LOC381383		ILMN_1226673	002230520	S	3126	CCAGCTGTATCAGCCAATGGTTCCCGTGGCCTTTGCTCTTGGTTTTGTGG										
Mus musculus	RefSeq	ILMN_195075	ILMN_195075	ZDHHC15	NM_175358.2	NM_175358.2		108672	31341701	NM_175358.2	Zdhhc15	NP_780567.1	ILMN_2798576	005050519	S	3518	GGGAGCTCATCCCCCAATCTTCGGTACTCTGCTTCCACAGTTGGAAAGTG	X	-	100741368-100741417	XqD	Mus musculus zinc finger, DHHC domain containing 15 (Zdhhc15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IDA]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IMP]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IGI]; The directed movement of a protein to a specific location [goid 45184] [evidence IDA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	6030457O13Rik	6030457O13Rik
Mus musculus	Riken	ILMN_206468	ILMN_206468	D430004H12RIK	ri|D430004H12|PX00193B13|AK084868|4139					AK084868	D430004H12Rik		ILMN_1236679	005550682	S	3891	GCTGCTGGCTAGGTGCTGGGAATCAAACCTGGGTCCTGTGGAAGAAGAGT										
Mus musculus	RefSeq	ILMN_210637	ILMN_210637	KREMEN2	NM_028416.1	NM_028416.1		73016	21703353	NM_028416.1	Kremen2	NP_082692.1	ILMN_2951946	005290242	S	1817	TGGGTGGTGTTTGGTTTCAGGGTTCTTTGCGCCTCTTTTGGGGATGGTCC	17	-	23878416-23878465	17qA3.3	Mus musculus kringle containing transmembrane protein 2 (Kremen2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2900054E04Rik	2900054E04Rik
Mus musculus	MEEBO	ILMN_189186	ILMN_189186	GI_39893_EMB_X17013.1_BSDPD_1251	gi_39893_emb_X17013.1_BSDPD_1251						gi_39893_emb_X17013.1_BSDPD_1251		ILMN_2459100	002370619	S	2	GTGGGAGACGCAGGCACAACTCTTTATACGGTTGGCTCTCAAAAAGAAGT										
Mus musculus	RefSeq	ILMN_217314	ILMN_217314	TCF21	NM_011545.1	NM_011545.1		21412	6755731	NM_011545.1	Tcf21	NP_035675.1	ILMN_2930707	005490563	S	751	ACTACAGCATCCTGACCTTGGAGGTGCGAGTCTGGGAACCGTGAGCTCTG	10	-	22537507-22537542:22537543-22537556	10qA3	Mus musculus transcription factor 21 (Tcf21), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IMP]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Pod1; epc; Pod-1; epicardin; capsulin	Pod1; epc; Pod-1; epicardin; capsulin
Mus musculus	RefSeq	ILMN_233623	ILMN_233623	ZBTB2	NM_001033466.1	NM_001033466.1		381990	85701992	NM_001033466.1	Zbtb2	NP_001028638.1	ILMN_2860932	000240162	S	2779	GGAGCAGGAGGATTAGGAGTTTGAGGCCAGCCTGGGCAAGACCTTGTCCA	10	+	5979019-5979068	10qA1	Mus musculus zinc finger and BTB domain containing 2 (Zbtb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Gm1103	Gm1103
Mus musculus	RefSeq	ILMN_247413	ILMN_247413	D16H22S680E	NM_138583.1	NM_138583.1		27883	20070387	NM_138583.1	D16H22S680E	NP_613049.1	ILMN_2842999	001570424	S	1289	CGAGGACCCTGTGTGCATTTTCTCAGTCCTGTAGTGTGGACCCTGGGATC	16	-	18302958-18303007	16qA3	Mus musculus DNA segment, Chr 16, human D22S680E, expressed (D16H22S680E), mRNA.				T10	T10
Mus musculus	RefSeq	ILMN_184980	ILMN_259010	FEM1A	NM_010192.3	NM_010192.3		14154	142364435	NM_010192.3	Fem1a	NP_034322.2	ILMN_2695936	003830370	S	3890	GACCTGGGGCCTGAACATTCTTCTGGGAGGGTTAATACAGCGGGTCCCAG	17	+	56400134-56400183	17qD	Mus musculus feminization 1 homolog a (C. elegans) (Fem1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		AW611390; MGC117925	AW611390; MGC117925
Mus musculus	Riken	ILMN_206381	ILMN_206381	B230207H15RIK	ri|B230207H15|PX00069M19|AK080798|1808					AK080798	B230207H15Rik		ILMN_1219683	001260309	S	1474	TGGGTGACAGAGAGTGCCCCGTCATAGTAAGCAAGCTGAGGTTTAGAACG										
Mus musculus	RefSeq	ILMN_196155	ILMN_245029	NNAT	NM_010923.2	NM_010923.2		18111	123701814	NM_010923.2	Nnat	NP_035053.1	ILMN_2755578	007570609	S	177	GGGTAGGATTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATTGCGAGA	2	+	157386974-157387023	2qH1	Mus musculus neuronatin (Nnat), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence IMP]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [evidence IMP]		AW107673; Peg5; 5730414I02Rik	AW107673; Peg5; 5730414I02Rik
Mus musculus	RefSeq	ILMN_221688	ILMN_221688	IER3IP1	NM_025409.1	NM_025409.1		66191	13384795	NM_025409.1	Ier3ip1	NP_079685.1	ILMN_2781602	002490598	S	1011	TAGTTGGCAAAATCAGCCCATACAGTCAGACTAGCCTGCTCCCGTGACTG	18	+	77145695-77145744	18qE3	Mus musculus immediate early response 3 interacting protein 1 (Ier3ip1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			1110057H19Rik; AI644142; AL022863; AV026606; AL022842	1110057H19Rik; AI644142; AL022863; AV026606; AL022842
Mus musculus	RefSeq	ILMN_197822	ILMN_324023	AA416372	NM_001085516.1	NM_001085516.1		332923	148229722	NM_001085516.1	AA416372	NP_001078985.1	ILMN_1254373	004810181	S	364	GTCCACTCAGCAGATGAAGGGATAAAGGAGCCAATTTCAAAGCACGTACC				4qC6	Mus musculus expressed sequence AA416372 (AA416372), mRNA.					
Mus musculus	RefSeq	ILMN_256012	ILMN_256012	TMEM63A	NM_144794.1	NM_144794.1		208795	21450146	NM_144794.1	Tmem63a	NP_659043.1	ILMN_2798340	005260097	S	3042	GCTGTAGGGACCGGGGAATACCTTGTTCTTGTTGATGGCAGCAGGGCAGC	1	+	182811582-182811631	1qH4	Mus musculus transmembrane protein 63a (Tmem63a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC25803; MGC11687; Tmem64a; BC014795	MGC25803; MGC11687; Tmem64a; BC014795
Mus musculus	Riken	ILMN_205805	ILMN_205805	A130022L12RIK	ri|A130022L12|PX00122F01|AK037510|2398					AK037510	A130022L12Rik		ILMN_1243872	006280762	S	1997	CAGAATTTCTTCACTGAGCCCCGCCTGCTAGACATGAGCTGGTACGATCC										
Mus musculus	RefSeq	ILMN_215364	ILMN_220771	TEX2	NM_198292.3	NM_198292.3		21763	51988885	NM_198292.3	Tex2	NP_938034.2	ILMN_1248072	002760601	S	4489	CAAACTCGGGGGCTCTAATTGTATAATTTGCTTTGAGGAGATCTACTAGG	11	-	106363856-106363905	11qE1	Mus musculus testis expressed gene 2 (Tex2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930568E07Rik; Taz4; Def-5; AI553404	4930568E07Rik; Taz4; Def-5; AI553404
Mus musculus	RefSeq	ILMN_220771	ILMN_220771	TEX2	NM_198292.3	NM_198292.3		21763	51988885	NM_198292.3	Tex2	NP_938034.2	ILMN_1222132	000430044	S	4769	CCCATTTGCCTGTCAAGAGCCCACATGCCTTGTTCATTGGTCTTTCTCTG	11	-	106363576-106363625	11qE1	Mus musculus testis expressed gene 2 (Tex2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930568E07Rik; Taz4; Def-5; AI553404	4930568E07Rik; Taz4; Def-5; AI553404
Mus musculus	RefSeq	ILMN_214058	ILMN_321638	4931419H13RIK	XM_001477957.1	XM_001477957.1		70970	149251050	XM_001477957.1	4931419H13Rik	XP_001478007.1	ILMN_2643796	002350634	S	836	GGTCCGTGTAGGAAATTGTATCAGAGAGAAAGGATCAGACAGACTCTTGG				3qC	PREDICTED: Mus musculus RIKEN cDNA 4931419H13 gene (4931419H13Rik), mRNA.					
Mus musculus	MEEBO	ILMN_215617	ILMN_215617	TFIP11	scl27411.14_7	NM_018783.3			13236502	NM_018783.3	Tfip11		ILMN_2661666	004540500	S	3327	TTTTCAGTCCCATGCCAGTGAGACTGCTGGGCTCGCCCTAAGGATGAAGG						A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_203170	ILMN_203170	A030001L21RIK	ri|A030001L21|PX00063K01|AK037153|2376					AK037153	A030001L21Rik		ILMN_2555264	003780278	S	2184	GACAGGGGGATGGACTTTGGTTTAGGGCTAGACTGGCTGACTTCCCAAGC										
Mus musculus	RefSeq	ILMN_191596	ILMN_250160	LOC631501	XM_905819.2	XM_905819.2		631501	94381507	XM_905819.2	LOC631501	XP_910912.1	ILMN_1247840	003990735	S	1953	TAGCCAGAAACAATATTAGCTCTTATCAGAGAATGCACACAGTAGACACC					PREDICTED: Mus musculus similar to zinc finger protein 665, transcript variant 1 (LOC631501), mRNA.					
Mus musculus	MEEBO	ILMN_218801	ILMN_218801	9130409J20RIK	scl41421.2.1_125				51828462	XM_488599	9130409J20Rik		ILMN_1235103	003360377	S	1218	TCTGTCTGTGTGTTGTTCATGTCTTAAAGGATAAAACTACATTTCTAGGC										
Mus musculus	RefSeq	ILMN_197053	ILMN_229747	BATF3	NM_030060.2	NM_030060.2		381319	142364287	NM_030060.2	Batf3	NP_084336.1	ILMN_2526739	001770609	S	166	GCAGCTCAGAGGAGCCGGAAGAAGCAGACCCAGAAGGCTGACAAGCTCCA	1	+	192924658-192924707	1qH6	Mus musculus basic leucine zipper transcription factor, ATF-like 3 (Batf3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	Snft	Snft
Mus musculus	RefSeq	ILMN_221610	ILMN_248745	2310015B20RIK	XM_907184.2	XM_907184.2		69563	94388346	XM_907184.2	2310015B20Rik	XP_912277.2	ILMN_2737747	005820725	S	321	CGTTTTGTTCGTTGACTTAATGTCCATTATGTATGTCGTCATAACGTCCT				10qB5.3	PREDICTED: Mus musculus RIKEN cDNA 2310015B20 gene (2310015B20Rik), mRNA.					
Mus musculus	Riken	ILMN_204126	ILMN_204126	B130038J23RIK	ri|B130038J23|PX00158K03|AK045128|1218					AK045128	B130038J23Rik		ILMN_2562578	003400364	S	805	CGCCTTTCACCATGTGCTACAGGTACAGTCACAGCAGCCAGCATAGGAAG										
Mus musculus	RefSeq	ILMN_216419	ILMN_216419	HIST3H2BB	NM_206882.1	NM_206882.1		382522	46049028	NM_206882.1	Hist3h2bb	NP_996765.1	ILMN_1257212	003420687	S	87	GCCTGATCCATCCAAATCAGCTCCAGCCCCCAAGAAAGGCTCCAAAAAGG	11	-	58767878-58767927	11qB1.3	Mus musculus histone cluster 3, H2bb (Hist3h2bb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4933432H21; 4930534G10Rik; B2Hist3h2bb; R75370; MGC130256	4933432H21; 4930534G10Rik; B2Hist3h2bb; R75370; MGC130256
Mus musculus	RefSeq	ILMN_222183	ILMN_222183	BC020535	NM_145536.1	NM_145536.1		228788	21704055	NM_145536.1	BC020535	NP_663511.1	ILMN_2745876	006770017	S	1945	GAATCGCTCCACCTACTGGCGGACAGAAAAGATTTCCAATTCACGCCCCA	2	+	152907136-152907185	2qH1	Mus musculus cDNA sequence BC020535 (BC020535), mRNA.				MGC19360	MGC19360
Mus musculus	MEEBO	ILMN_192449	ILMN_192449	PRDM15	scl48147.6_538						Prdm15		ILMN_1233271	000940491	S	19	CTTTGCTCCTTCACACCATTCTCAGTCAGTATCCAAAGGCAGAAGCAGTG										
Mus musculus	RefSeq	ILMN_213640	ILMN_226478	BCLP2	XM_485291.4	XM_485291.4		229687	94369785	XM_485291.4	Bclp2	XP_485291.2	ILMN_1249902	002480450	S	1071	GCCCAAATGGAATCTTATTCCAACACAACTTCCAAATGGATCCTCTCCTC	3	-	106145117-106145166	3qF2.2	PREDICTED: Mus musculus chitinase like protein 2 (Bclp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_186452	ILMN_260041	TUG1	NR_002321.1	NR_002321.1		544752	68303551	NR_002321.1	Tug1		ILMN_2435664	002470138	S	1178	CCTCATAGTATCATCTTCGGGTTACTCAGGAACCAAAACTTTTCACACCA	11	-	3544877-3544926	11qA1	Mus musculus taurine upregulated gene 1 (Tug1), non-coding RNA.		Development of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light [goid 42461] [evidence IMP]		AI316828	AI316828
Mus musculus	RefSeq	ILMN_260041	ILMN_260041	TUG1	NR_002321.1	NR_002321.1		544752	68303551	NR_002321.1	Tug1		ILMN_3028324	006860717	I	4536	GTTGAATGAGCCAGGCAGAAAATGAAGCCAGTACAGAGGGAAATGGAGCC	11	-	3539927-3539976	11qA1	Mus musculus taurine upregulated gene 1 (Tug1), non-coding RNA.		Development of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light [goid 42461] [evidence IMP]		AI316828	AI316828
Mus musculus	RefSeq	ILMN_204817	ILMN_260041	TUG1	NR_002321.1	NR_002321.1		544752	68303551	NR_002321.1	Tug1		ILMN_1244303	005080379	S	467	GACACGACTCACCAAGCACTGCCACCAGCACTGTCACTGGGAACTTGAAG	11	-	3546621-3546670	11qA1	Mus musculus taurine upregulated gene 1 (Tug1), non-coding RNA.		Development of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light [goid 42461] [evidence IMP]		AI316828	AI316828
Mus musculus	RefSeq	ILMN_192746	ILMN_260041	TUG1	NR_002321.1	NR_002321.1		544752	68303551	NR_002321.1	Tug1		ILMN_2490933	001570377	S	3757	CACTACTTACTTCTTTCATAACTCAGAAATGAATATGACTGGCCCAGAAG	11	-	3540706-3540755	11qA1	Mus musculus taurine upregulated gene 1 (Tug1), non-coding RNA.		Development of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light [goid 42461] [evidence IMP]		AI316828	AI316828
Mus musculus	RefSeq	ILMN_200516	ILMN_239832	H2-EB2	NM_001033978.2	NM_001033978.2		381091	142345320	NM_001033978.2	H2-Eb2	NP_001029150.1	ILMN_1216671	005220474	S	7	TCTCCTCAAGCATGGTGTCTCTGTGGCTCCCCAGAGGCCTCTGTGTGGCA	17	+	34462626-34462636:34462637-34462675	17qB1	Mus musculus histocompatibility 2, class II antigen E beta2 (H2-Eb2), mRNA.	A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		Iebeta2; A130038H09Rik; H-2Eb2; Ia-5; Ia5	Iebeta2; A130038H09Rik; H-2Eb2; Ia-5; Ia5
Mus musculus	RefSeq	ILMN_198152	ILMN_239832	H2-EB2	NM_001033978.2	NM_001033978.2		381091	142345320	NM_001033978.2	H2-Eb2	NP_001029150.1	ILMN_2530669	006290468	S	247	TGGCAGTGACTGAGCTGGGGCGGCCCATAGTTGAGTACTTGAACACCCAG	17	+	34470240-34470289	17qB1	Mus musculus histocompatibility 2, class II antigen E beta2 (H2-Eb2), mRNA.	A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		Iebeta2; A130038H09Rik; H-2Eb2; Ia-5; Ia5	Iebeta2; A130038H09Rik; H-2Eb2; Ia-5; Ia5
Mus musculus	MEEBO	ILMN_221222	ILMN_221222	9430029A11RIK	scl30241.3.1_211	NM_177881.2			31342763	NM_177881.2	9430029A11Rik		ILMN_2732667	005050014	S	1856	GATCATGGGTGATTTTAGCTTCCATGTAAAGGGATAGGTCCTGATGTCAC										
Mus musculus	RefSeq	ILMN_216099	ILMN_216099	SRXN1	NM_029688.2	NM_029688.2		76650	31541844	NM_029688.2	Srxn1	NP_083964.1	ILMN_2677772	000610463	S	2235	GCAATGGGTGCAGCAGTGAGGTAGCTATGCCACACAGAGACCATAGTCAC	2	+	151802446-151802495	2qG3	Mus musculus sulfiredoxin 1 homolog (S. cerevisiae) (Srxn1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: peroxiredoxin-(S-hydroxy-S-oxocysteine) + ATP + 2 R-SH <=> peroxiredoxin-(S-hydroxycysteine) + ADP + phosphate + R-S-S-R [goid 32542] [evidence IEA]	TX01; Srx; 1700127B04Rik; Npn3; AI854065; AW488194	TX01; Srx; 1700127B04Rik; Npn3; AI854065; AW488194
Mus musculus	RefSeq	ILMN_211407	ILMN_211407	MED29	NM_026042.2	NM_026042.2		67224	27754100	NM_026042.2	Med29	NP_080318.2	ILMN_2615538	007000392	S	1025	AGGAACCAAAATGCCTGGGTTACTAGGGCTACAGGAAGGGACTTTCTGGC	7	-	29171559-29171608	7qA3	Mus musculus mediator complex subunit 29 (Med29), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		AU020902; 2810405O22Rik; Ixl	AU020902; 2810405O22Rik; Ixl
Mus musculus	Riken	ILMN_204891	ILMN_204891	C2TA	ri|A530020G08|PX00140J03|AK040723|3773					AK040723	C2ta		ILMN_2568407	003190612	S	3696	TCTGTCCTCGGGACCTACATGGTAGAAGGAGAGAACCAACCAACTCCGGA										
Mus musculus	Riken	ILMN_201822	ILMN_201822	POLE2	ri|2610300B05|ZX00061P22|AK011941|1162					AK011941	Pole2		ILMN_1241943	003800474	S	1040	GCCTGAACGGGTGCACACAGATTTACAGACACCAATACCCAAAAGTGGCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_215874	ILMN_215874	4833439L19RIK	scl0097820.1_166				19527011	NM_133797	4833439L19Rik		ILMN_1225503	004880195	S	299	AAAAAAACACCTGGATCCCTGTCTTTCAATGGCTTCAAGACAACCAGAAG										
Mus musculus	RefSeq	ILMN_218863	ILMN_218863	HELT	NM_173789.4	NM_173789.4		234219	46048389	NM_173789.4	Helt	NP_776150.2	ILMN_2701162	006980373	S	1269	TTATCTCAATCTGATCGGCCATGGCCACCCCAACGGCCTCAACCTGCACA	8	-	47377615-47377664	8qB1.1	Mus musculus Hey-like transcription factor (zebrafish) (Helt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whereby a neuroblast acquires the specialized structural and functional features of a GABAergic inhibitory neuron in the basal ganglia. Differentiation includes the processes involved in commitment of a neuroblast to a GABAergic neuron [goid 21858] [evidence IMP]; The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10467] [evidence IMP]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Hesl; Mgn; megane; A830086M02	Hesl; Mgn; megane; A830086M02
Mus musculus	RefSeq	ILMN_221468	ILMN_221468	KANK3	NM_030697.2	NM_030697.2		80880	142344046	NM_030697.2	Kank3	NP_109622.1	ILMN_1224692	002810075	S	2029	GGACAAGAGGAGGAAGACATGGCTGTGGCCCAGAGACTTTTCAGTATGGG	17	+	33954720-33954769	17qB1	Mus musculus KN motif and ankyrin repeat domains 3 (Kank3), mRNA.				0610013D04Rik; NG28; D17Ertd288e	0610013D04Rik; NG28; D17Ertd288e
Mus musculus	RefSeq	ILMN_219984	ILMN_310682	2310040G24RIK	XM_001480154.1	XM_001480154.1		381792	149255327	XM_001480154.1	2310040G24Rik	XP_001480204.1	ILMN_2716069	000020739	S	360	CAGGCCTGTGATGCAAGACCAGGAAACAAAGGGATTGGGACACCGGTGGC	6	-	86437812-86437861	6qD1	PREDICTED: Mus musculus RIKEN cDNA 2310040G24 gene (2310040G24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_187744	ILMN_187744	USP39	NM_138592.3	NM_138592.3		28035	146149117	NM_138592.3	Usp39	NP_613058.1	ILMN_1244799	004850674	S	1993	CAGACAGTTCGGTAGAAACGTCAGGTCTGGAGACCCTAGGAGTAAACGTG				6qC1	Mus musculus ubiquitin specific peptidase 39 (Usp39), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	SAD1; AA408960; AI894154; D6Wsu157e; CGI-21	SAD1; AA408960; AI894154; D6Wsu157e; CGI-21
Mus musculus	RefSeq	ILMN_187744	ILMN_187744	USP39	NM_138592.3	NM_138592.3		28035	146149117	NM_138592.3	Usp39	NP_613058.1	ILMN_1228352	003440408	S	1486	CCAAGCCGTCCACAAGAACACCACCTATGATCTCATCGCCAACATCGTGC				6qC1	Mus musculus ubiquitin specific peptidase 39 (Usp39), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	SAD1; AA408960; AI894154; D6Wsu157e; CGI-21	SAD1; AA408960; AI894154; D6Wsu157e; CGI-21
Mus musculus	RefSeq	ILMN_185241	ILMN_242343	ABHD13	NM_001081119.1	NM_001081119.1		68904	124487440	NM_001081119.1	Abhd13	NP_001074588.1	ILMN_1214286	000580020	S	2962	CTGCCGAAAGGGCAATATGTAGCAACAGCCAGAATGTAGACTTGAGCTGC	8	+	9990043-9990092	8qA1.1	Mus musculus abhydrolase domain containing 13 (Abhd13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]	AI788994; 1110065L07Rik; AI463703	AI788994; 1110065L07Rik; AI463703
Mus musculus	RefSeq	ILMN_185241	ILMN_242343	ABHD13	NM_001081119.1	NM_001081119.1		68904	124487440	NM_001081119.1	Abhd13	NP_001074588.1	ILMN_2425360	002000689	S	5003	CTATCCATGTACAGTCTACCGTAGGTCATTAAGTTATCTAATGGTTCAAT	8	+	9992084-9992133	8qA1.1	Mus musculus abhydrolase domain containing 13 (Abhd13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]	AI788994; 1110065L07Rik; AI463703	AI788994; 1110065L07Rik; AI463703
Mus musculus	MEEBO	ILMN_190448	ILMN_190448	TNIK	scl23325.34_214				51708586	XM_130797	Tnik		ILMN_2470251	006280255	S	9	GCAGGGAAGACTCCTGACTTTGACCCTGGCTATCCTTTCTTGCTTCATGA							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211078	ILMN_211078	AICDA	scl0001133.1_43	NM_009645.1			6753017	NM_009645.1	Aicda		ILMN_2612278	001190373	S	577	GGAAGGGCTACATGAAAATTCTGTCCGGCTAACCAGACAACTTCGGCGCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: cytidine + H2O = uridine + NH3 [goid 4126] [evidence IDA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2 [goid 16814] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218538	ILMN_310266	LOC100047603	XM_001479162.1	XM_001479162.1		100047603	149267865	XM_001479162.1	LOC100047603	XP_001479212.1	ILMN_2697057	000070377	S	3479	CTTTACACACAGAACTGCAGACAAGAAAGGGTTTCGGTGGACTTGTAGCA					PREDICTED: Mus musculus similar to Discs, large homolog 1 (Drosophila), transcript variant 1 (LOC100047603), mRNA.					
Mus musculus	RefSeq	ILMN_218538	ILMN_310266	LOC100047603	XM_001479162.1	XM_001479162.1		100047603	149267865	XM_001479162.1	LOC100047603	XP_001479212.1	ILMN_1215860	004920201	S	545	TCTCCCATTGTCCCTGTGACCCCTGCCCTGCCAGTCCCTGCTGAGAGTAC					PREDICTED: Mus musculus similar to Discs, large homolog 1 (Drosophila), transcript variant 1 (LOC100047603), mRNA.					
Mus musculus	RefSeq	ILMN_210393	ILMN_210393	EG232599	NM_177689.3	NM_177689.3		232599	141803331	NM_177689.3	EG232599	NP_808357.1	ILMN_2605183	005550452	S	2135	CTCTCAAGTCCGTACTCACCAGTCCCACTACTGTACACATTAGAATGCCA	6	-	17026301-17026350	6qA2	Mus musculus predicted gene, EG232599 (EG232599), mRNA.				MGC156005; MGC156007; B930018B01	MGC156005; MGC156007; B930018B01
Mus musculus	RefSeq	ILMN_198222	ILMN_198222	LOC210245	XM_140186.2	XM_140186.2			38082965	XM_140186.2	LOC210245		ILMN_2530912	000450382	S	677	CTCAAGAGGAGAAAGCAGTGAATGGGAAAGGCGTCTGCACAGCAGCTCAG										
Mus musculus	RefSeq	ILMN_236878	ILMN_236878	PCDH17	NM_001013753.1	NM_001013753.1		219228	62988325	NM_001013753.1	Pcdh17	NP_001013775.1	ILMN_2804444	006270411	S	4329	GTGGTGGACTACTAGCTGACATCACAGGCTTCTACTGAAAGTCCCGAAAA	14	+	84933798-84933847	14qD3	Mus musculus protocadherin 17 (Pcdh17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm78; C030033F14Rik	Gm78; C030033F14Rik
Mus musculus	RefSeq	ILMN_216354	ILMN_216354	TMEM170	NM_025781.1	NM_025781.1		66817	21313305	NM_025781.1	Tmem170	NP_080057.1	ILMN_2978655	005820019	S	1745	CCTTTGGAAGGAAAGGGGGTACAGAGCCTAAGCACCTGTCATCAATCCAG	8	-	114751719-114751768	8qE1	Mus musculus transmembrane protein 170 (Tmem170), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			D8Bwg1414e; AA403674; 9030409E16Rik	D8Bwg1414e; AA403674; 9030409E16Rik
Mus musculus	RefSeq	ILMN_186284	ILMN_243394	AGTPBP1	NM_023328.2	NM_023328.2		67269	114158694	NM_023328.2	Agtpbp1	NP_075817.2	ILMN_2769799	002140110	S	3973	TTTTAGATATTCAATGTTCTTTATATAGCATTGAATTATCAAATGATAGA	13	-	59551262-59551311	13qB2	Mus musculus ATP/GTP binding protein 1 (Agtpbp1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IGI]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	BB114605; Nna1; 1700020N17Rik; MGC90651; 2900054O13Rik; 5730402G09Rik; nmf243; pcd; mKIAA1035; 4930445M19Rik	BB114605; Nna1; 1700020N17Rik; MGC90651; 2900054O13Rik; 5730402G09Rik; nmf243; pcd; mKIAA1035; 4930445M19Rik
Mus musculus	MEEBO	ILMN_222674	ILMN_222674	DCLRE1A	scl52347.10_3	NM_018831.2			24475998	NM_018831.2	Dclre1a		ILMN_2753242	000650370	S	3439	CATGGAGACCAGACACCAAGCATTATCTATGTAGTAATGAAACAAACCTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IMP]			
Mus musculus	MEEBO	ILMN_194929	ILMN_194929	TTC14	scl0067120.1_59	NM_025978.2			29336050	NM_025978.2	Ttc14		ILMN_1225224	005570110	S	1	CCTGGCTCTCTGGTGATTCGGTTATCCTAAACTGGGTTTCTGCTTGGGGG								Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215881	ILMN_215881	ADAM28	NM_183366.1	NM_183366.1		13522	34368581	NM_183366.1	Adam28	NP_899222.1	ILMN_2664739	007380653	S	2556	AGGCCTCCTTCTGTACTGATTTCCCATGGCCACTGAATCTTTGCTGTAAA	14	-	67561096-67561145	14qD2	Mus musculus a disintegrin and metallopeptidase domain 28 (Adam28), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	Dtgn1; C130072N01Rik; MDC-Ls; MDC-Lm; MDCL; D430033C21Rik; eMDCII; MDC-L	Dtgn1; C130072N01Rik; MDC-Ls; MDC-Lm; MDCL; D430033C21Rik; eMDCII; MDC-L
Mus musculus	RefSeq	ILMN_201763	ILMN_255124	ASB1	NM_023046.4	NM_023046.4		65247	103472020	NM_023046.4	Asb1	NP_075533.3	ILMN_1233302	000520224	S	1216	CTATCTCAGGTGCTTGGGCCATCGAACGCTCCTTGAGTCATTGTCAACTG	1	+	93451611-93451660	1qD	Mus musculus ankyrin repeat and SOCS box-containing 1 (Asb1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]		AI426616; mKIAA1146; AI851378; 1700054C17Rik; 1700029O08Rik	AI426616; mKIAA1146; AI851378; 1700054C17Rik; 1700029O08Rik
Mus musculus	RefSeq	ILMN_255124	ILMN_255124	ASB1	NM_023046.4	NM_023046.4		65247	103472020	NM_023046.4	Asb1	NP_075533.3	ILMN_3025113	001780343	I	9	TGGAGCTAGCCTTGTAACTGCCACCCTGTTAGCCCATCCCCGTCAGCGAT	1	+	93437665-93437714	1qD	Mus musculus ankyrin repeat and SOCS box-containing 1 (Asb1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]		AI426616; mKIAA1146; AI851378; 1700054C17Rik; 1700029O08Rik	AI426616; mKIAA1146; AI851378; 1700054C17Rik; 1700029O08Rik
Mus musculus	RefSeq	ILMN_185892	ILMN_255124	ASB1	NM_023046.4	NM_023046.4		65247	103472020	NM_023046.4	Asb1	NP_075533.3	ILMN_2430887	002480402	S	5470	GAGTCTGTAGCTGTTCAGTGGATCTTGGGGTTGCAGGGAGAAATCTAGTC	1	+	93455865-93455914	1qD	Mus musculus ankyrin repeat and SOCS box-containing 1 (Asb1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]		AI426616; mKIAA1146; AI851378; 1700054C17Rik; 1700029O08Rik	AI426616; mKIAA1146; AI851378; 1700054C17Rik; 1700029O08Rik
Mus musculus	RefSeq	ILMN_255124	ILMN_255124	ASB1	NM_023046.4	NM_023046.4		65247	103472020	NM_023046.4	Asb1	NP_075533.3	ILMN_3097950	006480243	A	5320	GATGTGGAGATCAAAGGACAGTGTTTGGGAGTTGGTTCTCCCAAGAGCCG	1	+	93455715-93455764	1qD	Mus musculus ankyrin repeat and SOCS box-containing 1 (Asb1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IMP]		AI426616; mKIAA1146; AI851378; 1700054C17Rik; 1700029O08Rik	AI426616; mKIAA1146; AI851378; 1700054C17Rik; 1700029O08Rik
Mus musculus	RefSeq	ILMN_216104	ILMN_216104	FOXF1A	NM_010426.1	NM_010426.1		15227	6753901	NM_010426.1	Foxf1a	NP_034556.1	ILMN_2667396	001570543	S	992	ATACAACAGGCGGAGGATCTTACTATCACCAGCAGGTCACCTACCAAGAC	8	+	123610709-123610758	8qE1	Mus musculus forkhead box F1a (Foxf1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The specification and formation of the apicobasal polarity of an epithelial cell [goid 45198] [evidence IGI]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Hfh8; HFH-8; Foxf1; Freac-1; AI450827; FREAC1	Hfh8; HFH-8; Foxf1; Freac-1; AI450827; FREAC1
Mus musculus	RefSeq	ILMN_210854	ILMN_210854	2810021B07RIK	NM_025479.4	NM_025479.4		66308	146135079	NM_025479.4	2810021B07Rik	NP_079755.1	ILMN_1253355	006130255	S	2518	GCTCTGCCTAGTCTCATGTGTAAAGGGGTTAATAGAGGGATGTTATGTGG				13qA2	Mus musculus RIKEN cDNA 2810021B07 gene (2810021B07Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC143487; C330007M08Rik	MGC143487; C330007M08Rik
Mus musculus	Riken	ILMN_205051	ILMN_205051	A830019P03RIK	ri|A830019P03|PX00154J05|AK043680|2848					AK043680	A830019P03Rik		ILMN_1225358	006940059	S	522	TGCAGCAGCGCCGAGGCCGAGACCCAGACTAGCTACACCAGCGTCAAGCA										
Mus musculus	RefSeq	ILMN_199740	ILMN_199740	EG383891	XM_357312.4	XM_357312.4		383891	149251356	XM_357312.4	EG383891	XP_357312.1	ILMN_2536312	004810356	S	103	GGCTTCCTTTTTGGTCGGGATGACACGGCTCTGAAGGGCGTAGGTCACTT	3	-	93237536-93237585	3qF2.1	PREDICTED: Mus musculus predicted gene, EG383891 (EG383891), mRNA.					
Mus musculus	MEEBO	ILMN_190139	ILMN_190139	2810468N07RIK	scl50975.2_304						2810468N07Rik		ILMN_2467513	006110097	S	9	AGCATGGGCTACGGTGGACGGGGAAAGGCTCGTTCTGACACTAGACACCT										
Mus musculus	RefSeq	ILMN_234596	ILMN_234596	DNAJC8	NM_172400.1	NM_172400.1		68598	27369492	NM_172400.1	Dnajc8	NP_765988.1	ILMN_2948465	007560576	S	594	GGAAGCGACAGAGAGAAGAGGAGATCGAAGCCCAGGAAAAAGCCAAGCGA	4	+	131823611-131823660	4qD2.3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 8 (Dnajc8), mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	AL024084; AU044514; 2010009J04Rik; AU019262; 1110021D09Rik	AL024084; AU044514; 2010009J04Rik; AU019262; 1110021D09Rik
Mus musculus	RefSeq	ILMN_185422	ILMN_185422	WDR5	NM_080848.1	NM_080848.1		140858	18252789	NM_080848.1	Wdr5	NP_543124.1	ILMN_2426921	006060088	S	2600	AAGAAGCCATTGTTAAAGAGGGTGGCTTGTCACACTGACATGGGCTCTGG	2	+	27391822-27391871	2qA3	Mus musculus WD repeat domain 5 (Wdr5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Big; AA960360; 2410008O07Rik; Big-3; AA408785	Big; AA960360; 2410008O07Rik; Big-3; AA408785
Mus musculus	RefSeq	ILMN_196926	ILMN_319950	A630095N17RIK	XM_001477008.1	XM_001477008.1		381272	149234059	XM_001477008.1	A630095N17Rik	XP_001477058.1	ILMN_2526282	006480446	S	127	TATCGGTGCCATCAGCCCTATGCTGACTTCTAACTGGAGGAGACCCTCTC				1qC3	PREDICTED: Mus musculus RIKEN cDNA A630095N17 gene (A630095N17Rik), mRNA.					
Mus musculus	Riken	ILMN_206168	ILMN_206168	BIRC6	ri|D130027C02|PX00183C14|AK083860|4069					AK083860	Birc6		ILMN_1246660	005700400	S	3837	ACGCCTTTAATCCCAGCAGGGAGAGTGAGGCTTTGAGTTTTAAGCCAGCC						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IC ]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	Riken	ILMN_202667	ILMN_202667	A930024K11RIK	ri|A930024K11|PX00066L15|AK020887|737					AK020887	A930024K11Rik		ILMN_1250901	000020026	S	446	ACGAGCATTTGCACAGGGCCCACGTTTGGTTCCTAGCACCTACAGGGTGG										
Mus musculus	RefSeq	ILMN_220895	ILMN_220895	2810405K02RIK	NM_025582.3	NM_025582.3		66469	141801670	NM_025582.3	2810405K02Rik	NP_079858.2	ILMN_1238542	003460270	S	509	GGTACTGTTGCACTTCATCCAGAAGTCCCCGGGTGACTATGTTCCCCAGG	4	-	154271207-154271256	4qE2	Mus musculus RIKEN cDNA 2810405K02 gene (2810405K02Rik), mRNA.				AI836168	AI836168
Mus musculus	RefSeq	ILMN_211748	ILMN_211748	C1QBP	NM_007573.2	NM_007573.2		12261	112181166	NM_007573.2	C1qbp	NP_031599.2	ILMN_1225373	002510451	S	387	CTGGAGATTGGGAGCTGGAGGTGAACGGCACGGAGGCTAAATTATTGCGC	11	-	70795688-70795737	11qB4	Mus musculus complement component 1, q subcomponent binding protein (C1qbp), nuclear gene encoding mitochondrial protein, mRNA.	The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	HABP1; D11Wsu182e; AA407365; P32; gC1qBP; AA986492	HABP1; D11Wsu182e; AA407365; P32; gC1qBP; AA986492
Mus musculus	MEEBO	ILMN_217197	ILMN_217197	2610204L23RIK	scl067163.2_42	NM_026009.1			21313103	NM_026009.1	2610204L23Rik		ILMN_2706057	002570110	S	1610	GTGAAAGCCATGTAGAGCTGGTTGCAGAGGTTGTGTCCTTGCTGCCGTTA										
Mus musculus	RefSeq	ILMN_245418	ILMN_245418	PI4KA	NM_001001983.1	NM_001001983.1		224020	50233837	NM_001001983.1	Pi4ka	NP_001001983.1	ILMN_2998870	001260241	S	6086	TCAGCCCGAACATGACAGAGCGGGAGGCTGCGAATTTTATCATGAAGGTC	16	-	17280835-17280884	16qA3	Mus musculus phosphatidylinositol 4-kinase, catalytic, alpha polypeptide (Pi4ka), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Pik4ca	Pik4ca
Mus musculus	RefSeq	ILMN_220421	ILMN_245418	PI4KA	NM_001001983.1	NM_001001983.1		224020	50233837	NM_001001983.1	Pi4ka	NP_001001983.1	ILMN_1253596	000160273	S	6316	CACGTGTGAGTCTCTTTCACACTGGACACATTCCGTTTGTTCACCCGTCA	16	-	17280509-17280558	16qA3	Mus musculus phosphatidylinositol 4-kinase, catalytic, alpha polypeptide (Pi4ka), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Pik4ca	Pik4ca
Mus musculus	MEEBO	ILMN_188519	ILMN_188519	UGT1A5	scl0394433.1_293				47059126	NM_201643	Ugt1a5		ILMN_2453351	006560095	S	11	TGGCCAAGTACTTAGGTATTCCTGCTGTGTTCTTTCTACGATACATCCCC								Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	MEEBO	ILMN_212791	ILMN_212791	KRT2-8	scl0016691.1_37	NM_031170.1			13624314	NM_031170.1	Krt2-8		ILMN_1229241	005860730	S	165	CATGTCAGCTAGGTAGCAGCTTCGGGGAAGCATGGCACGGTGTCTCTGGC										
Mus musculus	RefSeq	ILMN_199988	ILMN_199988	LOC384159	XM_357455.1	XM_357455.1			38079577	XM_357455.1	LOC384159		ILMN_2537196	004290286	S	153	GATGGAGGAAGCCTCATTGATGGAGGAAGCCACACTGATGGAGGAAGCCA										
Mus musculus	RefSeq	ILMN_216762	ILMN_216762	AHSA1	NM_146036.1	NM_146036.1		217737	22122514	NM_146036.1	Ahsa1	NP_666148.1	ILMN_2675072	006110240	S	856	CGACAGAGGTGGCAAGTTTCACATGGTCGATGGCAACGTCACCGGGGAGT	12	+	88614124-88614173	12qD2	Mus musculus AHA1, activator of heat shock protein ATPase homolog 1 (yeast) (Ahsa1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the activity of a molecular chaperone [goid 30189] [evidence IEA]; Functions to increase the rate of ATP hydrolysis [goid 1671] [evidence ISO]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence ISO]	MGC36589; p38; MGC36618; BC023857	MGC36589; p38; MGC36618; BC023857
Mus musculus	RefSeq	ILMN_213456	ILMN_213456	TMEM180	NM_029186.2	NM_029186.2		75146	114051516	NM_029186.2	Tmem180	NP_083462.2	ILMN_2709279	001690685	S	2088	CCACGCAGAAGTCGACTGAAAGTGCCACTCGCCTCTCCTCCTAGTCGTTT	19	+	46449552-46449601	19qC3	Mus musculus transmembrane protein 180 (Tmem180), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4930538D17Rik; 4930449A08Rik	4930538D17Rik; 4930449A08Rik
Mus musculus	RefSeq	ILMN_200592	ILMN_200592	LOC384372	XM_357603.1	XM_357603.1			38083985	XM_357603.1	LOC384372		ILMN_2539302	001090670	S	241	GCAGGTCCAGTCGACCCGAAAATTATCCAGAAACCAAAATATCTGGTGGC										
Mus musculus	RefSeq	ILMN_244019	ILMN_244019	BAG5	NM_027404.1	NM_027404.1		70369	58037204	NM_027404.1	Bag5	NP_081680.1	ILMN_3106819	004830433	A	1539	TGGCCCAGAACATCCTCAGCTACCTGGACATGAAGTCGGACGAGTGGGAG	12	-	112948248-112948254:112948255-112948297	12qF1	Mus musculus BCL2-associated athanogene 5 (Bag5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1600025G07Rik; 4930405J06Rik	1600025G07Rik; 4930405J06Rik
Mus musculus	RefSeq	ILMN_191846	ILMN_191846	TMC7	NM_172476.4	NM_172476.4		209760	146149179	NM_172476.4	Tmc7	NP_766064.2	ILMN_2501267	005910408	S	4134	TGCGGCTCTCTAACGGGTGTGTGTTAAACTCCTGATTCCGTGTCTTGAAA				7qF2	Mus musculus transmembrane channel-like gene family 7 (Tmc7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C230064B05; C630024K23Rik	C230064B05; C630024K23Rik
Mus musculus	Riken	ILMN_206918	ILMN_206918	A430096A09RIK	ri|A430096A09|PX00140G19|AK079868|2256					AK079868	A430096A09Rik		ILMN_1242636	000730333	S	1887	CCCTCAAGTGTTTTGCCCAAGGACCTTCCTTCCTCTAGGGGACAAATGCA										
Mus musculus	RefSeq	ILMN_244478	ILMN_244478	MTUS1	NM_001005864.2	NM_001005864.2		102103	111074539	NM_001005864.2	Mtus1	NP_001005864.1	ILMN_3142257	003400372	A	3908	GGAACAGCTGTGGTCTTAAGTGTTTTTTCAAGACCGGTCTTAGCCAAAGC	8	-	42076462-42076511	8qA4	Mus musculus mitochondrial tumor suppressor 1 (Mtus1), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		MGC115798; B430305I03Rik; C85752; ATBP135; MTSG1; AI481402; B430010I23Rik; mKIAA1288; Cctsg1-440; MD44; Atip1	MGC115798; B430305I03Rik; C85752; ATBP135; MTSG1; AI481402; B430010I23Rik; mKIAA1288; Cctsg1-440; MD44; Atip1
Mus musculus	RefSeq	ILMN_244478	ILMN_244478	MTUS1	NM_001005864.2	NM_001005864.2		102103	111074539	NM_001005864.2	Mtus1	NP_001005864.1	ILMN_3064383	003840736	I	148	ATTCTACACTCACACCCCCGGCCGGCTCAGAAAGGCAGTATGATGCTACC	8	-	42139951-42140000	8qA4	Mus musculus mitochondrial tumor suppressor 1 (Mtus1), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		MGC115798; B430305I03Rik; C85752; ATBP135; MTSG1; AI481402; B430010I23Rik; mKIAA1288; Cctsg1-440; MD44; Atip1	MGC115798; B430305I03Rik; C85752; ATBP135; MTSG1; AI481402; B430010I23Rik; mKIAA1288; Cctsg1-440; MD44; Atip1
Mus musculus	MEEBO	ILMN_221643	ILMN_221643	1200003I07RIK	scl0066869.1_139	NM_181274.2			40254344	NM_181274.2	1200003I07Rik		ILMN_2738310	006020128	S	4012	GCCCCCGGAGAGATTGGATGGTGCAGGGCTAAGGTAGTACTTTCTATTTA								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220157	ILMN_220157	SLC5A6	NM_177870.4	NM_177870.4		330064	141802749	NM_177870.4	Slc5a6	NP_808538.1	ILMN_1225056	006200762	S	3153	GGTGTCATTCTGTCATCTGTGCAACTATTATTTCCTTTGGGAGTTTCCTC	5	-	31338454-31338503	5qB1	Mus musculus solute carrier family 5 (sodium-dependent vitamin transporter), member 6 (Slc5a6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	E430023I20; MGC109689	E430023I20; MGC109689
Mus musculus	RefSeq	ILMN_198489	ILMN_198489	LOC381242	XM_358535.1	XM_358535.1			38085791	XM_358535.1	LOC381242		ILMN_1246600	002630368	S	231	GTCACCCACCACGGGCCATGCTCACTCCGAGACCTTAACTTTTGAGAGCC										
Mus musculus	RefSeq	ILMN_199449	ILMN_199449	LOC383483	XM_357088.1	XM_357088.1			38049380	XM_357088.1	LOC383483		ILMN_1218042	004180470	S	290	CCACTTCTCATGGATGGGTGGGAGTGATTTTGTTTGGTGCTGCCATATCC										
Mus musculus	Riken	ILMN_204064	ILMN_204064	FKBP7	ri|A630071D01|PX00147E20|AK042208|769					AK042208	Fkbp7		ILMN_1224152	001710445	S	592	CCACAAGAAGCAAGATGTGGAAGAAACCCAAGAGTCCAGAGATGGGAGAG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]		
Mus musculus	MEEBO	ILMN_184867	ILMN_184867	IL15	scl34591.1.1_22				6680406	NM_008357	Il15		ILMN_2422244	002350328	S	20	GAGAAGATAATTGATCTTGATTGTTCCGTTGCTTATCTACTCAGTGAGAC						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of T cell selection that occurs in extrathymic locations, often resulting T cells of distinct specificities from those selected in the thymus [goid 45062] [evidence IMP]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IMP]; Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism [goid 50691] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IMP]; The expansion of a NK T cell population by cell division [goid 1866] [evidence IMP]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IMP];  [goid 5126] [evidence IEA]		
Mus musculus	RefSeq	ILMN_260536	ILMN_260536	GM648	NM_001033372.1	NM_001033372.1		270599	85701871	NM_001033372.1	Gm648	NP_001028544.1	ILMN_2821710	004640021	S	420	GCCTGTGACAGGAGAAGCCGTTCTCCCCATGCCAGGAGATTCTCAGACTG	X	-	52891960-52892009	XqA5	Mus musculus gene model 648, (NCBI) (Gm648), mRNA.					
Mus musculus	RefSeq	ILMN_201436	ILMN_312369	LOC100045081	XM_001473631.1	XM_001473631.1		100045081	149268252	XM_001473631.1	LOC100045081	XP_001473681.1	ILMN_1240556	000870037	S	599	GTGATCACTGTGGTAAAGCCTTTGCATATCTTGGTCATCTGCGAGTACAT					PREDICTED: Mus musculus similar to novel KRAB box and zinc finger, C2H2 type domain containing protein (LOC100045081), mRNA.					
Mus musculus	Riken	ILMN_205823	ILMN_205823	A530041J03RIK	ri|A530041J03|PX00141B13|AK040899|3719					AK040899	A530041J03Rik		ILMN_1221205	003990288	S	3452	GAGAATTGAACCTAGGACCTCCTCCTGTTAGGTAGAAGGGACCCACTGGC										
Mus musculus	RefSeq	ILMN_215500	ILMN_215500	UBXD8	NM_178397.2	NM_178397.2		76577	31341590	NM_178397.2	Ubxd8	NP_848484.1	ILMN_2660328	000130563	S	3981	GGTGCCAAGGCCAAGGAAAGAATGTCGGGAGGTGACTGAGAAGGAGCAGT	13	+	54765118-54765167	13qB1	Mus musculus UBX domain containing 8 (Ubxd8), mRNA.				mKIAA0887; AI462440; 2210404D11Rik	mKIAA0887; AI462440; 2210404D11Rik
Mus musculus	RefSeq	ILMN_187336	ILMN_253705	TEX24	NM_001013609.1	NM_001013609.1		541463	61888893	NM_001013609.1	Tex24	NP_001013627.1	ILMN_2443237	001740286	S	1565	GTATTTTTCCGGAGAAATATTTTTGTTGGACCTCAATCCACCAAGTTCCA	8	+	28459458-28459507	8qA2	Mus musculus testis expressed gene 24 (Tex24), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			1700108N07Rik; TESF-1	1700108N07Rik; TESF-1
Mus musculus	RefSeq	ILMN_253705	ILMN_253705	TEX24	NM_001013609.1	NM_001013609.1		541463	61888893	NM_001013609.1	Tex24	NP_001013627.1	ILMN_2785857	000430494	S	1431	CTATTCAGTGGTTGGTGACATATGAGGCAGAATACCTGGGGCCCTGGGCT	8	+	28459324-28459373	8qA2	Mus musculus testis expressed gene 24 (Tex24), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			1700108N07Rik; TESF-1	1700108N07Rik; TESF-1
Mus musculus	RefSeq	ILMN_209912	ILMN_209912	OLFR108	NM_146465.1	NM_146465.1		258457	33239253	NM_146465.1	Olfr108	NP_666676.1	ILMN_2898062	001170717	S	613	GTCCTGATGATGGCTTTGGCTGGAGTTTTGGGAGTCAGTGCAGTTCTTTG	17	+	37578182-37578231	17qB1	Mus musculus olfactory receptor 108 (Olfr108), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR156-5	MOR156-5
Mus musculus	RefSeq	ILMN_209912	ILMN_209912	OLFR108	NM_146465.1	NM_146465.1		258457	33239253	NM_146465.1	Olfr108	NP_666676.1	ILMN_2600380	001230424	S	53	CTGGCTTTATCCTCTTGGGACTACCCAGAGAACCAGAGAAGTGGCAGCAC	17	+	37577622-37577671	17qB1	Mus musculus olfactory receptor 108 (Olfr108), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR156-5	MOR156-5
Mus musculus	RefSeq	ILMN_186391	ILMN_186391	UQCRC2	NM_025899.2	NM_025899.2		67003	92373414	NM_025899.2	Uqcrc2	NP_080175.1	ILMN_2435140	002650608	S	1321	TGCCACCTTCTACCGTCCTTCAACAGATTGACTCCGTGGCTGATGCTGAT	7	+	127801126-127801175	7qF2	Mus musculus ubiquinol cytochrome c reductase core protein 2 (Uqcrc2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1500004O06Rik	1500004O06Rik
Mus musculus	RefSeq	ILMN_199529	ILMN_199529	LOC382679	XM_356623.1	XM_356623.1			38074003	XM_356623.1	LOC382679		ILMN_2535552	007650392	S	278	ACCCCATGGCTGTCAAATCAGAACTCCTAGAACCTATTGAATTTAGGGGC										
Mus musculus	RefSeq	ILMN_215114	ILMN_215114	LBX2	NM_010692.3	NM_010692.3		16815	118130088	NM_010692.3	Lbx2	NP_034822.1	ILMN_1258787	002630204	S	484	ATGTGGAGGAGATGCGCGCGGACGTGGCCTCCCTATGCGGGTTGTCCCCT	6	+	83037902-83037951	6qC3	Mus musculus ladybird homeobox homolog 2 (Drosophila) (Lbx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC130325; Lbx2h	MGC130325; Lbx2h
Mus musculus	RefSeq	ILMN_210022	ILMN_210022	2410015M20RIK	NM_153152.3	NM_153152.3		224904	142348236	NM_153152.3	2410015M20Rik	NP_694792.1	ILMN_1230931	003830288	S	442	CCTCAAGGAACACAGCAAGTAATGGATGCCACCTGCCCCAGCATTATGGG	17	-	56747138-56747166:56747167-56747187	17qD	Mus musculus RIKEN cDNA 2410015M20 gene (2410015M20Rik), mRNA.				QIL1	QIL1
Mus musculus	RefSeq	ILMN_185285	ILMN_261655	MAK	NM_008547.1	NM_008547.1		17152	6678785	NM_008547.1	Mak	NP_032573.1	ILMN_1221665	001470187	S	1991	ACCCCACAGCCAAAAATCTCAATATTGTGAACCGCACACAGCCAGTCCCC	13	-	41121827-41121876	13qA3.3	Mus musculus male germ cell-associated kinase (Mak), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	A930010O05Rik	A930010O05Rik
Mus musculus	Riken	ILMN_204547	ILMN_204547	ZIC4	ri|B930002F08|PX00162D03|AK046913|2543					AK046913	Zic4		ILMN_1242831	003180021	S	2427	CGACCTACATCAGAGAAGCAAAAGTGTGCCTGGCTGGCTCTCAGGTTTGC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219855	ILMN_219855	CSTF1	NM_024199.2	NM_024199.2		67337	133892406	NM_024199.2	Cstf1	NP_077161.1	ILMN_1216029	004060474	S	1742	GTAGAACCATCTTGCAGGGATCCCAGTCCCATCCTGAGGTGACATTGTCC	2	+	172206508-172206557	2qH3	Mus musculus cleavage stimulation factor, 3' pre-RNA, subunit 1 (Cstf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]		AI788832; 1700057K18Rik	AI788832; 1700057K18Rik
Mus musculus	RefSeq	ILMN_218791	ILMN_218791	OLFR845	NM_207145.1	NM_207145.1		258249	46369496	NM_207145.1	Olfr845	NP_997028.1	ILMN_2700281	000510719	S	592	TTGATTTATATCTCAGCTTTCATGTTTGGTGGTATTCCTTTCTTTGGAAT	9	+	19143497-19143546	9qA2	Mus musculus olfactory receptor 845 (Olfr845), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR150-1; MGC157541; MOR150-2	MOR150-1; MGC157541; MOR150-2
Mus musculus	RefSeq	ILMN_200304	ILMN_200304	LOC386183	XM_359108.1	XM_359108.1			38081266	XM_359108.1	LOC386183		ILMN_1256753	004280356	S	24	TTTATCTACTCATGCCAGGCCATTACAGGTCTGGCAAATGGATGTCACAC										
Mus musculus	MEEBO	ILMN_216313	ILMN_216313	HMX1	scl27900.2.1_2	NM_010445.1			6754217	NM_010445.1	Hmx1		ILMN_2669666	007100372	S	317	AACGCGGTGGTACCCACGGGTGCACGGCGGCTACGGAGGTGGTCTAAGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]		
Mus musculus	RefSeq	ILMN_219604	ILMN_219604	MMP9	NM_013599.2	NM_013599.2		17395	31560795	NM_013599.2	Mmp9	NP_038627.1	ILMN_2711075	001570551	S	2986	GCTAGAGAGGTAGAGGGGGTCTGTGCGTTATGGTTCAGGTCAGACTGTGT	2	+	164781193-164781242	2qH3	Mus musculus matrix metallopeptidase 9 (Mmp9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISO]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]	MMP-9; Clg4b; protease; pro-MMP-9; zymogen; B/MMP9; AW743869	MMP-9; Clg4b; protease; pro-MMP-9; zymogen; B/MMP9; AW743869
Mus musculus	MEEBO	ILMN_195986	ILMN_195986	LOC242681	scl00242681.1_330				38079251	XM_144080	LOC242681		ILMN_1241476	001110446	S	16	GATTTACTTACTTCTGGTCTGTGACAATAAACATTTATAATGTCTTGTGT										
Mus musculus	RefSeq	ILMN_193985	ILMN_246750	NAT8L	NM_001001985.3	NM_001001985.3		269642	134288911	NM_001001985.3	Nat8l	NP_001001985.3	ILMN_2502275	001660463	S	6272	CTGACTGGGTTTGGCCAGGGTGCAGAGGGTATGACACAGTGGTAGGTCTC	5	+	34348308-34348357	5qB2	Mus musculus N-acetyltransferase 8-like (Nat8l), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	Shati; 1110038O08Rik	Shati; 1110038O08Rik
Mus musculus	RefSeq	ILMN_209253	ILMN_246750	NAT8L	NM_001001985.3	NM_001001985.3		269642	134288911	NM_001001985.3	Nat8l	NP_001001985.3	ILMN_2594039	006480315	S	3481	TGAGGCATTTGCAGAACACTGTACAGACCCCGCTCTCCCCTGTACATTCC	5	+	34345517-34345566	5qB2	Mus musculus N-acetyltransferase 8-like (Nat8l), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	Shati; 1110038O08Rik	Shati; 1110038O08Rik
Mus musculus	Riken	ILMN_204494	ILMN_204494	B230326M20RIK	ri|B230326M20|PX00160A09|AK045953|1984					AK045953	B230326M20Rik		ILMN_1215398	002100520	S	1545	GCCACGCATCTCTACCTTCCTGGGGTATCACAGTTGCTTTCATTCAAACG										
Mus musculus	RefSeq	ILMN_220578	ILMN_220578	EPHA4	NM_007936.3	NM_007936.3		13838	86788142	NM_007936.3	Epha4	NP_031962.2	ILMN_2724014	000770148	S	5389	CATAACTATGCCAGAGTGACAAAGTTATTTCACCCCTTTTGAGGGGACCT	1	-	77364649-77364698	1qC4	Mus musculus Eph receptor A4 (Epha4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sek; rb; AI385584; Hek8; Sek1; Cek8; 2900005C20Rik; Tyro1	Sek; rb; AI385584; Hek8; Sek1; Cek8; 2900005C20Rik; Tyro1
Mus musculus	RefSeq	ILMN_222306	ILMN_222306	PYGB	NM_153781.1	NM_153781.1		110078	24418918	NM_153781.1	Pygb	NP_722476.1	ILMN_2747754	003170110	S	3493	GGGCAGAATCTACATTAAGTGCCGCCCAAAGGAGAGTGCGTTGTCATAGA	2	+	150657139-150657188	2qG3	Mus musculus brain glycogen phosphorylase (Pygb), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence ISO]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate. The name should be qualified in each instance by adding the name of the natural substrate, e.g. maltodextrin phosphorylase, starch phosphorylase, glycogen phosphorylase [goid 4645] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MGC36329	MGC36329
Mus musculus	RefSeq	ILMN_213092	ILMN_213092	CD48	NM_007649.4	NM_007649.4		12506	145966847	NM_007649.4	Cd48	NP_031675.1	ILMN_2633530	004230437	S	848	CTCTGGCTCTATTGGACAAAGGAAAATGTGTTACTGAACGTCTGCGAGAG				1qH3	Mus musculus CD48 antigen (Cd48), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [evidence IDA]	BCM1; SLAMF2; MEM-102; BLAST1; BLAST; Sgp-60; Bcm-1; AI449234; AW610730; BLAST-1	BCM1; SLAMF2; MEM-102; BLAST1; BLAST; Sgp-60; Bcm-1; AI449234; AW610730; BLAST-1
Mus musculus	RefSeq	ILMN_216323	ILMN_216323	EID1	NM_025613.3	NM_025613.3		58521	148539850	NM_025613.3	Eid1	NP_079889.2	ILMN_2669766	004200367	S	1168	GTGTTACAAACGCTTCTGGAATTTTGACTGCACATGTATCTTCATGATTT				2qF1	Mus musculus EP300 interacting inhibitor of differentiation 1 (Eid1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence ISO]	ORF12; EID-1; PNAS-22; PTD014; Cri1; 2610002K20Rik	ORF12; EID-1; PNAS-22; PTD014; Cri1; 2610002K20Rik
Mus musculus	RefSeq	ILMN_201479	ILMN_201479	LOC385238	XM_358137.1	XM_358137.1			38094072	XM_358137.1	LOC385238		ILMN_1229124	005890433	S	198	AGTCGTCACTGAACACATCCAGGTGAACGAGGCACCTAAGATGCTCCGAG										
Mus musculus	RefSeq	ILMN_209180	ILMN_209180	PPFIA1	XM_133979.7	XM_133979.7		233977	94381473	XM_133979.7	Ppfia1	XP_133979.5	ILMN_1223363	004150114	S	3693	CCAACTTCCGGGTCACCTCCTCAATGTCATCTCCCTCTATGCAGCCAAAG	7	-	151667005-151667054	7qF5	PREDICTED: Mus musculus protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein, alpha 1, transcript variant 1 (Ppfia1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209180	ILMN_209180	PPFIA1	XM_133979.7	XM_133979.7		233977	94381473	XM_133979.7	Ppfia1	XP_133979.5	ILMN_2593293	001090754	S	3613	GAGGGCGCCTTCCTGGAGGAAGAAGTTCAGACCAAAGGACATTCGTGGCT	7	-	151667085-151667134	7qF5	PREDICTED: Mus musculus protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein, alpha 1, transcript variant 1 (Ppfia1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209180	ILMN_209180	PPFIA1	XM_133979.7	XM_133979.7		233977	94381473	XM_133979.7	Ppfia1	XP_133979.5	ILMN_2597909	001990369	S	4951	TGTGACCCTCCCGATTATATAACAGTCTGTGCAGTCAACTTCTGAACTGT	7	-	151662723-151662772	7qF5	PREDICTED: Mus musculus protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein, alpha 1, transcript variant 1 (Ppfia1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209811	ILMN_227810	9230110F15RIK	XM_915244.2	XM_915244.2		77080	94385722	XM_915244.2	9230110F15Rik	XP_920337.1	ILMN_2700142	006560369	S	125	GCAGGCATCTTTTGCTCTTGTGTTCATCCAAGTCCAAGCTACAGTGTGCA				9qA4	PREDICTED: Mus musculus RIKEN cDNA 9230110F15 gene (9230110F15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211584	ILMN_211584	ATP2C1	NM_175025.2	NM_175025.2		235574	33186871	NM_175025.2	Atp2c1	NP_778190.2	ILMN_2658392	006860193	S	4479	CATTGATAGGAGAGTTCTGTTGTTTGTGTCTGTACTACTGAAGCACGAGC	9	-	105314001-105314050	9qF1	Mus musculus ATPase, Ca++-sequestering (Atp2c1), mRNA. XM_920852 XM_920861 XM_920863 XM_920866 XM_920870 XM_920876 XM_920881	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]	SPCA; AW061228; D930003G21Rik; HHD; pmr1; ATP2C1A; 1700121J11Rik; MGC58010; BCPM	SPCA; AW061228; D930003G21Rik; HHD; pmr1; ATP2C1A; 1700121J11Rik; MGC58010; BCPM
Mus musculus	RefSeq	ILMN_211584	ILMN_211584	ATP2C1	NM_175025.2	NM_175025.2		235574	33186871	NM_175025.2	Atp2c1	NP_778190.2	ILMN_1252963	005810747	S	983	CCCCTCAGCCAGCTGCTAATGGAGATCTTGCGTCAAGAAGTAACATCGCC	9	-	105355899-105355948	9qF1	Mus musculus ATPase, Ca++-sequestering (Atp2c1), mRNA. XM_920852 XM_920861 XM_920863 XM_920866 XM_920870 XM_920876 XM_920881	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]	SPCA; AW061228; D930003G21Rik; HHD; pmr1; ATP2C1A; 1700121J11Rik; MGC58010; BCPM	SPCA; AW061228; D930003G21Rik; HHD; pmr1; ATP2C1A; 1700121J11Rik; MGC58010; BCPM
Mus musculus	RefSeq	ILMN_254845	ILMN_254845	EG272350	NM_001013768.1	NM_001013768.1		272350	85701465	NM_001013768.1	EG272350	NP_001013790.1	ILMN_2879824	006200768	S	1081	GAGTGCAGATCGTGCAAAGTTTGGTTCTGCTTTCTTGGGGGTTGTTCTGG	7	+	4963414-4963463	7qA1	Mus musculus predicted gene, EG272350 (EG272350), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	RefSeq	ILMN_257079	ILMN_257079	CETN4	NM_145825.1	NM_145825.1		207175	22003865	NM_145825.1	Cetn4	NP_665824.1	ILMN_3032453	001440091	I	1	ATAGCAACCGCCTGTCGGGAGCAAACGCGCGCCGCGGAGGGGAGAGCGGC	3	-	37503945-37503994	3qB	Mus musculus centrin 4 (Cetn4), mRNA.	A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a complex of G-protein beta/gamma subunits [goid 31683] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	MGC107235	MGC107235
Mus musculus	RefSeq	ILMN_257079	ILMN_257079	CETN4	NM_145825.1	NM_145825.1		207175	22003865	NM_145825.1	Cetn4	NP_665824.1	ILMN_3105936	006980022	A	578	AGACCAGCCTTTATTAGCTGCTTGGTGCCTTCCAAGAGGTTTGGACCTCC	3	-	37500607-37500640:37500641-37500656	3qB	Mus musculus centrin 4 (Cetn4), mRNA.	A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a complex of G-protein beta/gamma subunits [goid 31683] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	MGC107235	MGC107235
Mus musculus	RefSeq	ILMN_201310	ILMN_201310	LOC382412	XM_356492.1	XM_356492.1			38090748	XM_356492.1	LOC382412		ILMN_2541838	002060452	S	166	GTTGATAGCCATGGGATTGACCAGAACATCATCCCTATATCCACTGGTGC										
Mus musculus	Riken	ILMN_207096	ILMN_207096	E330019L22RIK	ri|E330019L22|PX00211E18|AK087776|1784					AK087776	E330019L22Rik		ILMN_1253880	005900022	S	1545	CCCACTGGAGTCTTAGGGAGACCGGAGGAGTCTGAGAGGCGAAGAGCAAA										
Mus musculus	RefSeq	ILMN_209670	ILMN_209670	AY074887	NM_145229.2	NM_145229.2		246735	114842406	NM_145229.2	AY074887	NP_660264.1	ILMN_2598061	002450020	S	491	CCTTTCTCAGATCCAACTCTTTAATTGGGATAACTTTTGTTCTAAGTTTA	9	-	54798221-54798247:54798248-54798270	9qB	Mus musculus cDNA sequence AY074887 (AY074887), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Mcpr1	Mcpr1
Mus musculus	RefSeq	ILMN_215412	ILMN_215412	MCM3AP	NM_019434.2	NM_019434.2		54387	109627647	NM_019434.2	Mcm3ap	NP_062307.2	ILMN_2659182	006590398	S	6287	CTCTAATTCATAATGCTTTGTCTGTATTCAATTGTGTTATAGATGCTGTT	10	+	75947531-75947561:75947635-75947653	10qC1	Mus musculus minichromosome maintenance deficient 3 (S. cerevisiae) associated protein (Mcm3ap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			mKIAA0572; GANP	mKIAA0572; GANP
Mus musculus	Riken	ILMN_204477	ILMN_204477	JMJ	ri|B130010D11|PX00157M04|AK044888|1323					AK044888	jmj		ILMN_1225779	003060408	S	1191	AGGCTGTGTGAGGGGCAGTGGAAGCCAGGCTTGGGTGAGAGCTGAGAAAA										
Mus musculus	RefSeq	ILMN_200465	ILMN_241253	CCDC18	NM_028481.1	NM_028481.1		73254	58037312	NM_028481.1	Ccdc18	NP_082757.1	ILMN_1215352	006250653	S	3541	GGTGGAGGCTCGTCGCCAAGAAGTCCAAGCACAGAGGGAAATAGAAAGGC	5	+	108641223-108641272	5qF	Mus musculus coiled-coil domain containing 18 (Ccdc18), mRNA.				1700021E15Rik; 4932411G06Rik; MGC100177; NY-SAR-41	1700021E15Rik; 4932411G06Rik; MGC100177; NY-SAR-41
Mus musculus	RefSeq	ILMN_210583	ILMN_241253	CCDC18	NM_028481.1	NM_028481.1		73254	58037312	NM_028481.1	Ccdc18	NP_082757.1	ILMN_2607088	007210301	S	941	AAGGAAAATAAAAGGCTTCAAGAAAAGTGTAATCTGTATAAAAGTGAACT	5	+	108587592-108587641	5qF	Mus musculus coiled-coil domain containing 18 (Ccdc18), mRNA.				1700021E15Rik; 4932411G06Rik; MGC100177; NY-SAR-41	1700021E15Rik; 4932411G06Rik; MGC100177; NY-SAR-41
Mus musculus	RefSeq	ILMN_196478	ILMN_241253	CCDC18	NM_028481.1	NM_028481.1		73254	58037312	NM_028481.1	Ccdc18	NP_082757.1	ILMN_1257698	006860196	S	2684	ACTGCCAGGCAAGCCAAACTTGAGATGGATCAGTACAAAGAGGAGCTGTC	5	+	108622855-108622862:108625015-108625056	5qF	Mus musculus coiled-coil domain containing 18 (Ccdc18), mRNA.				1700021E15Rik; 4932411G06Rik; MGC100177; NY-SAR-41	1700021E15Rik; 4932411G06Rik; MGC100177; NY-SAR-41
Mus musculus	RefSeq	ILMN_200466	ILMN_241253	CCDC18	NM_028481.1	NM_028481.1		73254	58037312	NM_028481.1	Ccdc18	NP_082757.1	ILMN_1247339	004480707	S	554	GCAAAAATTGCTATGCTTGAGTCTGCACAAGAGCAGGCAGCCAACATTCC	5	+	108568086-108568091:108569878-108569921	5qF	Mus musculus coiled-coil domain containing 18 (Ccdc18), mRNA.				1700021E15Rik; 4932411G06Rik; MGC100177; NY-SAR-41	1700021E15Rik; 4932411G06Rik; MGC100177; NY-SAR-41
Mus musculus	Riken	ILMN_204326	ILMN_204326	ZFP30	ri|5330432C24|PX00054N21|AK030562|3707					AK030562	Zfp30		ILMN_2564120	005720026	S	3230	CAGATACCTCAGCCTTGTGCCAGCCCTCAGGACTAGTCTCAGACGAGATC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195752	ILMN_248532	DDX58	NM_172689.3	NM_172689.3		230073	153945885	NM_172689.3	Ddx58	NP_766277.3	ILMN_2717127	002490142	S	2811	CGTGGAAGATATTGTGAGCGGAGTTCAGAACCGGCACTCAAAGTGGAAGG				4qA5	Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 (Ddx58), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C330021E21; 6430573D20Rik; RIG-I	C330021E21; 6430573D20Rik; RIG-I
Mus musculus	Riken	ILMN_203972	ILMN_203972	2810450N13RIK	ri|A530026C20|PX00140I13|AK040802|1716					AK040802	2810450N13Rik		ILMN_2561392	005820047	S	1438	TTACTGTCTCAGCCTTCCCAGTGTTAGGATTACAGGTGTGCTGCCACGCC										
Mus musculus	MEEBO	ILMN_192282	ILMN_192282	3322402L07RIK	scl17043.4_19				30794151	NM_023727	3322402L07Rik		ILMN_2506683	003450360	S	3	GGGTTGCCGCATCAGCTGTTTTTGCCTTCGCAGGTGGAATTTCCCCTCCA										
Mus musculus	MEEBO	ILMN_192282	ILMN_192282	3322402L07RIK	scl17043.4_19				30794151	NM_023727	3322402L07Rik		ILMN_2486632	001450170	S	20	GTGAGGGTCTCAGGTCCTGTAAGACTCAGGGCTAACAGAGGTGTCTGCTG										
Mus musculus	MEEBO	ILMN_192101	ILMN_192101	IGHV1S129_AF304548_IG_HEAVY_VARIABLE_1S129_110	IGHV1S129_AF304548_Ig_heavy_variable_1S129_110						IGHV1S129_AF304548_Ig_heavy_variable_1S129_110		ILMN_2485001	003460129	S	11	CCTGGACGAAGCCTTGAGTGGATTGGAAGGATTGATCCTAATAGTGGTGG										
Mus musculus	RefSeq	ILMN_209796	ILMN_209796	CABP7	NM_138948.3	NM_138948.3		192650	92110035	NM_138948.3	Cabp7	NP_620398.1	ILMN_2599292	007510196	S	447	GCTGAAGCGGCTTCTCTATGACACCTTCTGCGAGCACTTGTCCATGAAGG	11	-	4639637-4639669:4640372-4640388	11qA1	Mus musculus calcium binding protein 7 (Cabp7), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC129429; MGC129428	MGC129429; MGC129428
Mus musculus	RefSeq	ILMN_218654	ILMN_218654	CSTF2	NM_133196.5	NM_133196.5		108062	146149259	NM_133196.5	Cstf2	NP_573459.1	ILMN_2698589	002000167	S	4243	CATGTAACAATGTACTTAGTGGGTGATATGGGAGTGGGAAGCTTGGTCGT				XqE3	Mus musculus cleavage stimulation factor, 3' pre-RNA subunit 2 (Cstf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Cstf64; 64kDa; C630034J23Rik	Cstf64; 64kDa; C630034J23Rik
Mus musculus	RefSeq	ILMN_236719	ILMN_236719	BC064033	NM_173375.1	NM_173375.1		208164	27734065	NM_173375.1	BC064033	NP_775551.1	ILMN_2833163	007380626	S	1363	TGCGTGTTTTTCCTAAAATACCATAGCACTGTCAGCGACTTGGGTGCTCC	6	-	35262861-35262910	6qB1	Mus musculus cDNA sequence BC064033 (BC064033), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			B230314O19	B230314O19
Mus musculus	RefSeq	ILMN_197177	ILMN_197177	LOC227571	XM_140811.3	XM_140811.3			38074468	XM_140811.3	LOC227571		ILMN_1226984	004200600	S	153	GGAAAACCAGTCTCTGCGTCAGAAGGTCTTACCTATGACAACCATCCAGG										
Mus musculus	RefSeq	ILMN_214460	ILMN_214460	RIF1	NM_175238.4	NM_175238.4		51869	47087462	NM_175238.4	Rif1	NP_780447.3	ILMN_3007813	002690463	S	4538	GTTCTGAAGGAGGTGGTGGTACCCTGGACAATCTAGACAAGTCGTCTGAG	2	+	51966566-51966615	2qC1.1	Mus musculus Rap1 interacting factor 1 homolog (yeast) (Rif1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IDA]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IDA]; The pronucleus originating from the spermatozoa that was involved in fertilization [goid 1940] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6530403D07Rik; AW549474; AU016181; 5730435J01Rik; D2Ertd145e	6530403D07Rik; AW549474; AU016181; 5730435J01Rik; D2Ertd145e
Mus musculus	RefSeq	ILMN_189296	ILMN_189296	TSSC4	NM_138631.1	NM_138631.1		56844	41281680	NM_138631.1	Tssc4	NP_619537.1	ILMN_2460043	003400253	S	683	GGGGGGCCGGGGTCTGAGAGAGGACCCTCAGTTTGACTGCAGTGCTATCA	7	+	150251742-150251791	7qF5	Mus musculus tumor-suppressing subchromosomal transferable fragment 4 (Tssc4), transcript variant 2, mRNA.				AA241958; ESTM671070	AA241958; ESTM671070
Mus musculus	RefSeq	ILMN_259501	ILMN_259501	C030045D06RIK	NM_001033636.1	NM_001033636.1		109294	85702056	NM_001033636.1	C030045D06Rik	NP_001028808.1	ILMN_3143920	004290315	A	308	GAGTCGGACTGCTGTCAGTTTCTTCAGAGCTGTGTGACAGGCTCGGTGCC	1	+	11251290-11251339	1qA2	Mus musculus RIKEN cDNA C030045D06 gene (C030045D06Rik), mRNA.				D430013K02; AI316880; AI553603	D430013K02; AI316880; AI553603
Mus musculus	RefSeq	ILMN_259501	ILMN_259501	C030045D06RIK	NM_001033636.1	NM_001033636.1		109294	85702056	NM_001033636.1	C030045D06Rik	NP_001028808.1	ILMN_3065921	006370224	I	1265	CCACTGATGGCGGTGGGTAGGAAGTTGCTAGGTTGGAGAGAGAGGAGTGA	1	+	11283624-11283673	1qA2	Mus musculus RIKEN cDNA C030045D06 gene (C030045D06Rik), mRNA.				D430013K02; AI316880; AI553603	D430013K02; AI316880; AI553603
Mus musculus	RefSeq	ILMN_222813	ILMN_222813	SPEER7-PS1	NR_001585.2	NR_001585.2		75858	142372335	NR_001585.2	Speer7-ps1		ILMN_1249847	004180747	S	964	GTAATTCCTATGTATCTAACTCTGTGTTTACTTTCCAAACCCCTCTCAGT	5	+	15220295-15220344	5qA2	Mus musculus spermatogenesis associated glutamate (E)-rich protein 7, pseudogene 1 (Speer7-ps1) on chromosome 5.				4930568L21Rik; SPEER-7; Speer7-ps	4930568L21Rik; SPEER-7; Speer7-ps
Mus musculus	RefSeq	ILMN_201582	ILMN_261952	TIGD4	NM_207278.2	NM_207278.2		403175	113866000	NM_207278.2	Tigd4	NP_997161.1	ILMN_2542998	005860451	S	445	ACAGCGTTTTATACGGATCTAGAAGAAGCATTGATGAGGTGGTATCGGAT	3	+	84397940-84397989	3qF1	Mus musculus tigger transposable element derived 4 (Tigd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C130063O11Rik; Gm418	C130063O11Rik; Gm418
Mus musculus	RefSeq	ILMN_261952	ILMN_261952	TIGD4	NM_207278.2	NM_207278.2		403175	113866000	NM_207278.2	Tigd4	NP_997161.1	ILMN_2896955	001710390	S	2774	GCAGTCCTTGGTCCTCTGAAGGCTGGATAGATGCCCCAGTGTAGGAGAAC	3	+	84400269-84400318	3qF1	Mus musculus tigger transposable element derived 4 (Tigd4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C130063O11Rik; Gm418	C130063O11Rik; Gm418
Mus musculus	RefSeq	ILMN_198967	ILMN_198967	LOC215538	XM_147139.2	XM_147139.2			38090173	XM_147139.2	LOC215538		ILMN_2533567	004860170	S	821	AAGGCATTCAGTGGGAAGTCACATCTCAGCCGGCACCAGGAAGTCCACAG										
Mus musculus	RefSeq	ILMN_234672	ILMN_234672	DBT	NM_010022.1	NM_010022.1		13171	6753609	NM_010022.1	Dbt	NP_034152.1	ILMN_2820948	007150014	S	2305	CCTCCCAGCCCTCAGTAGGAGCACGTATTAATAAGTAGAGCCACATGGGA	3	+	116541060-116541109	3qG1	Mus musculus dihydrolipoamide branched chain transacylase E2 (Dbt), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with lipoic acid, 1,2-dithiolane-3-pentanoic acid [goid 31405] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: 2-methylpropanoyl-CoA + enzyme N6-(dihydrolipoyl)lysine = CoA + enzyme N6-(S-[2-methylpropanoyl]dihydrolipoyl)lysine [goid 43754] [evidence IEA]	D3Wsu60e	D3Wsu60e
Mus musculus	Riken	ILMN_207426	ILMN_207426	4832424I19RIK	ri|4832424I19|PX00638M24|AK076437|2667					AK076437	4832424I19Rik		ILMN_1229010	006900519	S	2503	GTCCACAGGGAATTGCTGGGAGATACACTCATGGCCTTATCTTGAAGCAC										
Mus musculus	RefSeq	ILMN_216506	ILMN_216506	APOA2	NM_013474.1	NM_013474.1		11807	7304896	NM_013474.1	Apoa2	NP_038502.1	ILMN_2775957	006420131	S	136	GGCAGACGGACCGGATATGCAGAGCCTGTTCACTCAATACTTTCAGAGCA	1	+	173155816-173155865	1qH3	Mus musculus apolipoprotein A-II (Apoa2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of beta-glucosides into, out of, within or between cells. Beta-glucosides are glycosides in which the sugar moiety is a glucose residue, and the anomeric carbon of the bond is in a beta configuration [goid 15759] [evidence NAS]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence NAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IDA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IDA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IGI]; Any process that decreases the frequency, rate or extent of lipase activity, the hydrolysis of a lipid or phospholipid [goid 60192] [evidence IMP]; Any process that modulates the frequency, rate or extent of absorption of cholesterol into the blood, and the exclusion of other sterols from absorption [goid 30300] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence IMP]	ApoA-II; Alp-2; Apoa-2; Hdl-1; ApoAII	ApoA-II; Alp-2; Apoa-2; Hdl-1; ApoAII
Mus musculus	RefSeq	ILMN_216506	ILMN_216506	APOA2	NM_013474.1	NM_013474.1		11807	7304896	NM_013474.1	Apoa2	NP_038502.1	ILMN_1247156	006350537	S	38	ACTGTTCCTAGGCCATAGTCTGCCATCATGAAGCTGCTCGCAATGGTCGC	1	+	173155419-173155445:173155446-173155468	1qH3	Mus musculus apolipoprotein A-II (Apoa2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of beta-glucosides into, out of, within or between cells. Beta-glucosides are glycosides in which the sugar moiety is a glucose residue, and the anomeric carbon of the bond is in a beta configuration [goid 15759] [evidence NAS]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence NAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IDA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IDA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IGI]; Any process that decreases the frequency, rate or extent of lipase activity, the hydrolysis of a lipid or phospholipid [goid 60192] [evidence IMP]; Any process that modulates the frequency, rate or extent of absorption of cholesterol into the blood, and the exclusion of other sterols from absorption [goid 30300] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence IMP]	ApoA-II; Alp-2; Apoa-2; Hdl-1; ApoAII	ApoA-II; Alp-2; Apoa-2; Hdl-1; ApoAII
Mus musculus	Riken	ILMN_202839	ILMN_202839	GPC6	ri|6720464D08|PX00059N11|AK032866|2141					AK032866	Gpc6		ILMN_2552701	003520754	S	1733	CCTGACAGTTTGCAGGATTTGGCTGTGGCAGTGGCGGGATTTAGGAGCCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]				
Mus musculus	RefSeq	ILMN_189409	ILMN_241633	SH3TC2	NM_172628.2	NM_172628.2		225608	100817512	NM_172628.2	Sh3tc2	NP_766216.2	ILMN_1240728	003180307	S	4312	TGCTCATGGGAACTGCTGGGTCCGGGATGGTTTTGGCTCAGGAGACTCAG	18	+	62175145-62175194	18qE1	Mus musculus SH3 domain and tetratricopeptide repeats 2 (Sh3tc2), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	D430044G18Rik	D430044G18Rik
Mus musculus	RefSeq	ILMN_199373	ILMN_199373	MPV17	NM_008622.1	NM_008622.1		17527	6678925	NM_008622.1	Mpv17	NP_032648.1	ILMN_3003242	002360333	S	1020	GACACACTATAAGAATTGTGTCCTGGGGGCTGGAGAGATGGCTCAGCCTG	5	-	31417869-31417918	5qB1	Mus musculus Mpv17 transgene, kidney disease mutant (Mpv17), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IDA]		Tg.Mpv17	Tg.Mpv17
Mus musculus	RefSeq	ILMN_212739	ILMN_212739	DHX9	NM_007842.2	NM_007842.2		13211	150456418	NM_007842.2	Dhx9	NP_031868.2	ILMN_2697594	004860017	S	2516	CCCACATGACACCAGAGATGTTTAGAACACCATTGCATGAAATTGCTCTG				1qG3	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Dhx9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	NDH II; NDHII; Ddx9; AI326842; RHA; MGC90954	NDH II; NDHII; Ddx9; AI326842; RHA; MGC90954
Mus musculus	RefSeq	ILMN_212739	ILMN_212739	DHX9	NM_007842.2	NM_007842.2		13211	150456418	NM_007842.2	Dhx9	NP_031868.2	ILMN_2762418	001580086	S	3175	AAGGAGAAGAGAAAGATTCTTACCACTGAAGGGCGCAATGCACTTATCCA				1qG3	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 9 (Dhx9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	NDH II; NDHII; Ddx9; AI326842; RHA; MGC90954	NDH II; NDHII; Ddx9; AI326842; RHA; MGC90954
Mus musculus	RefSeq	ILMN_259298	ILMN_259298	PPM1M	NM_026447.2	NM_026447.2		67905	31980929	NM_026447.2	Ppm1m	NP_080723.2	ILMN_3151840	004180575	A	1556	CTGTTCAAAGCCACAGCCCAATGCTTACCAGGTCCCACCTTCTGCAATGG	9	-	106053292-106053341	9qF1	Mus musculus protein phosphatase 1M (Ppm1m), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the reaction: phospho-(DNA-directed RNA polymerase) + H2O = (DNA-directed RNA polymerase) + phosphate [goid 8420] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2810423O19Rik; AW610647; PP2Ceta; C77250	2810423O19Rik; AW610647; PP2Ceta; C77250
Mus musculus	RefSeq	ILMN_259298	ILMN_259298	PPM1M	NM_026447.2	NM_026447.2		67905	31980929	NM_026447.2	Ppm1m	NP_080723.2	ILMN_3073044	002350348	I	253	GCGCACCCAGCACGGGGCCGCACACTGCCTTGGAACGCAGGCTACGCAGA	9	-	106057074-106057123	9qF1	Mus musculus protein phosphatase 1M (Ppm1m), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the reaction: phospho-(DNA-directed RNA polymerase) + H2O = (DNA-directed RNA polymerase) + phosphate [goid 8420] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2810423O19Rik; AW610647; PP2Ceta; C77250	2810423O19Rik; AW610647; PP2Ceta; C77250
Mus musculus	RefSeq	ILMN_196736	ILMN_196736	HIST2H2AA2	NM_178212.1	NM_178212.1		319192	30061398	NM_178212.1	Hist2h2aa2	NP_835584.1	ILMN_1242167	001110670	S	2	TGTCCGGTCGTGGCAAGCAAGGAGGCAAGGCCCGCGCCAAGGCCAAGTCG					Mus musculus histone cluster 2, H2aa2 (Hist2h2aa2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2a-614	H2a-614
Mus musculus	Riken	ILMN_203319	ILMN_203319	E130112N23RIK	ri|E130112N23|PX00091P17|AK053596|1823					AK053596	E130112N23Rik		ILMN_2556397	005050615	S	1769	GGCCCAGGCCCCTGACTGGAGGCACCCATACTCTTTGTTACTCTTTTATG										
Mus musculus	RefSeq	ILMN_192462	ILMN_226722	EDEM2	NM_145537.1	NM_145537.1		108687	21704057	NM_145537.1	Edem2	NP_663512.1	ILMN_2669280	003390739	S	184	CGCCTACGACAGTTACCTGGAAAATGCCTTTCCCTACGATGAGCTGAGAC	2	-	155554660-155554709	2qH1	Mus musculus ER degradation enhancer, mannosidase alpha-like 2 (Edem2), mRNA.				9530090G24Rik; AI327354	9530090G24Rik; AI327354
Mus musculus	RefSeq	ILMN_192462	ILMN_226722	EDEM2	NM_145537.1	NM_145537.1		108687	21704057	NM_145537.1	Edem2	NP_663512.1	ILMN_2684279	005220639	S	1744	GCTGGCATTGCTAGGCCAGGTTTTCCTAGACTCCTCATAGCCACTGGATA	2	-	155527820-155527830:155527831-155527869	2qH1	Mus musculus ER degradation enhancer, mannosidase alpha-like 2 (Edem2), mRNA.				9530090G24Rik; AI327354	9530090G24Rik; AI327354
Mus musculus	RefSeq	ILMN_226722	ILMN_226722	EDEM2	NM_145537.1	NM_145537.1		108687	21704057	NM_145537.1	Edem2	NP_663512.1	ILMN_2918469	001070678	S	1574	AAACAGAGCAGGCCAAAGAGAGCTCAGAGGAAGACAGTGAGGTCGGGGCC	2	-	155527990-155528039	2qH1	Mus musculus ER degradation enhancer, mannosidase alpha-like 2 (Edem2), mRNA.				9530090G24Rik; AI327354	9530090G24Rik; AI327354
Mus musculus	RefSeq	ILMN_192462	ILMN_226722	EDEM2	NM_145537.1	NM_145537.1		108687	21704057	NM_145537.1	Edem2	NP_663512.1	ILMN_1237028	002490333	S	833	GAGTACCTGGTAAAAGGAGCCATCCTTCTTCAGGATAAGAAACTCATGGC	2	-	155539084-155539133	2qH1	Mus musculus ER degradation enhancer, mannosidase alpha-like 2 (Edem2), mRNA.				9530090G24Rik; AI327354	9530090G24Rik; AI327354
Mus musculus	RefSeq	ILMN_196888	ILMN_224961	EG629383	XM_894265.2	XM_894265.2		629383	94392439	XM_894265.2	EG629383	XP_899358.1	ILMN_1234292	003170332	S	18	TCGCACAGGCAGCGGCGGTGCGAAGCCGGCCTTCGCCAACATGTACTACA	12	-	25323865-25323875:25323876-25323914	12qA1.3	PREDICTED: Mus musculus predicted gene, EG629383, transcript variant 2 (EG629383), mRNA.					
Mus musculus	RefSeq	ILMN_216139	ILMN_216139	KCNRG	NM_206974.1	NM_206974.1		328424	46195443	NM_206974.1	Kcnrg	NP_996857.1	ILMN_1214094	007320240	S	1725	CCCTCAGGCATACAAAGCCCTCTATGACTATGATTGTACCCCTCAGCAGA	14	+	62231563-62231612	14qD1	Mus musculus potassium channel regulator (Kcnrg), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	E030012H22Rik; Gm745	E030012H22Rik; Gm745
Mus musculus	RefSeq	ILMN_248360	ILMN_248360	DNALC1	NM_028821.1	NM_028821.1		105000	55742876	NM_028821.1	Dnalc1	NP_083097.1	ILMN_2913930	003170333	S	594	CTCGTCGGTAATCCCCTGGAGGAGAAACACTCTGCCGAGGGCAACTGGAT	12	+	85026293-85026342	12qD1	Mus musculus dynein, axonemal, light chain 1 (Dnalc1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC159095; E330027P08Rik; Dnal1; MGC159097; 1700010H15Rik; AW121714	MGC159095; E330027P08Rik; Dnal1; MGC159097; 1700010H15Rik; AW121714
Mus musculus	RefSeq	ILMN_220390	ILMN_220390	SLC16A11	NM_153081.2	NM_153081.2		216867	110347517	NM_153081.2	Slc16a11	NP_694721.1	ILMN_2721413	003460646	S	1148	AGTTATGCCCCACTGGTTTTCGGTGTGCTCCCGGGGCTGGTGGGCATTGG	11	+	70028905-70028954	11qB3	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 11 (Slc16a11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	RP23-198E14.4; AB041591; MNCb-2717	RP23-198E14.4; AB041591; MNCb-2717
Mus musculus	MEEBO	ILMN_217472	ILMN_217472	FUBP1	scl22453.17.1_0	NM_057172.1			16975503	NM_057172.1	Fubp1		ILMN_2683593	001980400	S	1793	CAGCAGGCTCCAGCTCCAGCTGGACAGGTTGATTATACAAAGGCTTGGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213701	ILMN_213701	ARL6IP5	NM_022992.2	NM_022992.2		65106	118130383	NM_022992.2	Arl6ip5	NP_075368.1	ILMN_1241924	007550563	S	300	CGCCGGATGAAGAAGCAGTACCCAACGGCCTTCGTGATGGTGGTCATGCT	6	+	97179625-97179674	6qD3	Mus musculus ADP-ribosylation factor-like 6 interacting protein 5 (Arl6ip5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5930404D22Rik; Gtrap3-18; AV001879; Aip-5	5930404D22Rik; Gtrap3-18; AV001879; Aip-5
Mus musculus	RefSeq	ILMN_213701	ILMN_213701	ARL6IP5	NM_022992.2	NM_022992.2		65106	118130383	NM_022992.2	Arl6ip5	NP_075368.1	ILMN_1252111	001070546	S	855	ATTAGACGGCCACAGTGCCATCTTATCGTAGGGAAGAAGTCCCTGTAGAG	6	+	97182825-97182874	6qD3	Mus musculus ADP-ribosylation factor-like 6 interacting protein 5 (Arl6ip5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5930404D22Rik; Gtrap3-18; AV001879; Aip-5	5930404D22Rik; Gtrap3-18; AV001879; Aip-5
Mus musculus	MEEBO	ILMN_222101	ILMN_222101	0610008F07RIK	scl18383.5.1_228	NM_197983.1			37574055	NM_197983.1	0610008F07Rik		ILMN_1236537	004540673	S	706	CACCTGTTGGGGCTAGTGCCATCGATATTGCCCGTGCTCAATTAAATATG										
Mus musculus	RefSeq	ILMN_195513	ILMN_232116	MRPL35	NM_025430.2	NM_025430.2		66223	142372564	NM_025430.2	Mrpl35	NP_079706.1	ILMN_2753924	000630470	S	1242	CCAGGGAACTCTCATTGGGCCATCCTGCCTTTTCCTCGTAAGTCTGAATC	6	-	71765387-71765436	6qC1	Mus musculus mitochondrial ribosomal protein L35 (Mrpl35), nuclear gene encoding mitochondrial protein, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	1110066C01Rik	1110066C01Rik
Mus musculus	RefSeq	ILMN_217490	ILMN_217490	MAFK	NM_010757.2	NM_010757.2		17135	118130123	NM_010757.2	Mafk	NP_034887.1	ILMN_2683831	006760669	S	2511	AAGTGAGTTTTCTGTCTTGTTCCTTTGACTTCTGAAAGTAAGCTTTAACT	5	+	140278292-140278341	5qG2	Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) (Mafk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AW061068; Nfe2u; NF-E2	AW061068; Nfe2u; NF-E2
Mus musculus	RefSeq	ILMN_200496	ILMN_200496	LOC383271	XM_356957.1	XM_356957.1			38082779	XM_356957.1	LOC383271		ILMN_2538976	002320020	S	1140	TAACCACCTCAACTTCGTGTCTCTGGATGGTAACAGCACACCTGGCCAGC										
Mus musculus	MEEBO	ILMN_190418	ILMN_190418	PEX3	scl38185.13.1_27				31982703	NM_019961	Pex3		ILMN_2469982	003890070	S	7	GAGCAGAAGTGACTGAACCACGTGTCAGCAATAGATTATCTACATCTGCT						Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]			
Mus musculus	RefSeq	ILMN_199256	ILMN_246144	LOC279872	XM_001004385.1	XM_001004385.1		279872	94418663	XM_001004385.1	LOC279872	XP_001004385.1	ILMN_1248587	002510673	S	633	GGTCAGCAGTCCTCTGAGGTTAGTAAATTGCCCGTGGGAGAAAGCAATGG				14qC2	PREDICTED: Mus musculus similar to T cell receptor alpha MD13 (LOC279872), mRNA.					
Mus musculus	RefSeq	ILMN_193766	ILMN_310716	LOC100043968	XM_001472454.1	XM_001472454.1		100043968	149266184	XM_001472454.1	LOC100043968	XP_001472504.1	ILMN_2500216	000610687	S	151	GACTACTTCTGGTGGTACAGACAGCACTCTGGGAAAAGCCCCAAGATGCT	14	+	53309864-53309913		PREDICTED: Mus musculus similar to TRAV7D-2 (LOC100043968), mRNA.					
Mus musculus	Riken	ILMN_204281	ILMN_204281	9630025C19RIK	ri|9630025C19|PX00115M08|AK035989|2057					AK035989	9630025C19Rik		ILMN_1213889	001440458	S	202	GCCCCTGGGGAGGGGCGGAGCTGTAGATATGGCATAAGATATTTCTTCAA										
Mus musculus	RefSeq	ILMN_237445	ILMN_237445	4930519F16RIK	NM_029170.1	NM_029170.1		75106	110626033	NM_029170.1	4930519F16Rik	NP_083446.1	ILMN_2812960	002030189	S	594	AGAGAAGGCCGTGGGCTTGTGTATTCAGAGTCAACCACGGGAAGACTGCT	X	-	100428142-100428191	XqD	Mus musculus RIKEN cDNA 4930519F16 gene (4930519F16Rik), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Ppnx	Ppnx
Mus musculus	RefSeq	ILMN_203831	ILMN_324541	SNX27	NM_029721.1	NM_029721.1		76742	126722909	NM_029721.1	Snx27	NP_083997.1	ILMN_1253259	006200400	S	2448	TCGGAGGGTTGTCTCCAGATCGGAGGCCCTGCTGCTCCTCAGTAACTCTT	3	-	94305215-94305264	3qF2.1	Mus musculus sorting nexin family member 27 (Snx27), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730552M22Rik; ESTM45; R75405; mKIAA0488	5730552M22Rik; ESTM45; R75405; mKIAA0488
Mus musculus	RefSeq	ILMN_184315	ILMN_324541	SNX27	NM_029721.1	NM_029721.1		76742	126722909	NM_029721.1	Snx27	NP_083997.1	ILMN_1258788	003870397	S	5986	GCTGCTGAGCTGGGCTTCAGTTTTTCCCAGGCCATGCACACTTATAATTT	3	-	94301677-94301726	3qF2.1	Mus musculus sorting nexin family member 27 (Snx27), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730552M22Rik; ESTM45; R75405; mKIAA0488	5730552M22Rik; ESTM45; R75405; mKIAA0488
Mus musculus	RefSeq	ILMN_202526	ILMN_324541	SNX27	NM_029721.1	NM_029721.1		76742	126722909	NM_029721.1	Snx27	NP_083997.1	ILMN_1226745	002570082	S	2382	GTGAGCGGCTGTGTTGGCTTGGGATTGTTGAATCCGGTTGTCAGCGCGTG	3	-	94305281-94305330	3qF2.1	Mus musculus sorting nexin family member 27 (Snx27), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730552M22Rik; ESTM45; R75405; mKIAA0488	5730552M22Rik; ESTM45; R75405; mKIAA0488
Mus musculus	RefSeq	ILMN_184315	ILMN_324541	SNX27	NM_029721.1	NM_029721.1		76742	126722909	NM_029721.1	Snx27	NP_083997.1	ILMN_1260052	004060544	S	4248	AAGCCTCCACAGGCTTCGTCTTTGGCTTTATGTAGCTGAAAGGCAGCCAG	3	-	94303415-94303464	3qF2.1	Mus musculus sorting nexin family member 27 (Snx27), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730552M22Rik; ESTM45; R75405; mKIAA0488	5730552M22Rik; ESTM45; R75405; mKIAA0488
Mus musculus	RefSeq	ILMN_203988	ILMN_324541	SNX27	NM_029721.1	NM_029721.1		76742	126722909	NM_029721.1	Snx27	NP_083997.1	ILMN_1213457	001340079	S	2350	CCAGGTGGTAAATATTCAGAGTCCTCTGTGATGTGAGCGGCTGTGTTGGC	3	-	94305313-94305362	3qF2.1	Mus musculus sorting nexin family member 27 (Snx27), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730552M22Rik; ESTM45; R75405; mKIAA0488	5730552M22Rik; ESTM45; R75405; mKIAA0488
Mus musculus	RefSeq	ILMN_189295	ILMN_261062	OLFR102	NM_001011721.1	NM_001011721.1		258218	58801499	NM_001011721.1	Olfr102	NP_001011721.1	ILMN_2460041	006350131	S	759	AGTTCTCTTCACCTACATCCGTCCTGCCTCAGGCAGCTCTCTGGATCAGG	17	-	37450519-37450568	17qB1	Mus musculus olfactory receptor 102 (Olfr102), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR250-4	MOR250-4
Mus musculus	RefSeq	ILMN_190117	ILMN_255094	DCBLD1	NM_025705.2	NM_025705.2		66686	142371872	NM_025705.2	Dcbld1	NP_079981.1	ILMN_1253155	001500768	S	1790	CCAACCCTTCCTGCAGAGCCAGTTGGTTTCTGTTGTGCTAGAACAAGGGG	10	+	52039948-52039997	10qB3	Mus musculus discoidin, CUB and LCCL domain containing 1 (Dcbld1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4631413K11Rik	4631413K11Rik
Mus musculus	Riken	ILMN_206547	ILMN_206547	ABCD3	ri|C130089K18|PX00172G15|AK081952|639					AK081952	Abcd3		ILMN_2580917	004850017	S	444	ACTCGGTTAGGTTTAGCCCGAGATGACTTGCTGCCCATGTAGCTCTGTTT						A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_247676	ILMN_247676	FHOD1	NM_177699.2	NM_177699.2		234686	31343258	NM_177699.2	Fhod1	NP_808367.1	ILMN_2980177	002680372	S	3630	TGCAGGCACTGGGACTAAGCAAAGCTCCTGGTCTAGGGGTGTGAGGTGCT	8	-	108218518-108218525:108218526-108218567	8qD3	Mus musculus formin homology 2 domain containing 1 (Fhod1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	FHOS1; BC017144; FHOS	FHOS1; BC017144; FHOS
Mus musculus	RefSeq	ILMN_184176	ILMN_184176	USP37	NM_176972.2	NM_176972.2		319651	31342497	NM_176972.2	Usp37	NP_795946.1	ILMN_1235652	004210576	S	5	CCCAGGGTGATGATGGTGTGCTTTAGTGAGTTCTCTTGTCTCTACTGGAG	1	-	74477439-74477488	1qC3	Mus musculus ubiquitin specific peptidase 37 (Usp37), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	4932415L06Rik; C330008N13Rik	4932415L06Rik; C330008N13Rik
Mus musculus	RefSeq	ILMN_208868	ILMN_208868	GDPD5	NM_201352.2	NM_201352.2		233552	52345430	NM_201352.2	Gdpd5	NP_958740.2	ILMN_1254943	002260746	S	3464	CACAGGGCAATGGGCCACCTGGGCGAAGCACATTGGGCTCAGTCAAGCAT	7	+	106609375-106609424	7qE2	Mus musculus glycerophosphodiester phosphodiesterase domain containing 5 (Gdpd5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	MGC37148; Gde2; BC024955; MGC31332	MGC37148; Gde2; BC024955; MGC31332
Mus musculus	RefSeq	ILMN_197806	ILMN_197806	LOC279333	XM_205529.2	XM_205529.2			38078331	XM_205529.2	LOC279333		ILMN_1247841	002900750	S	108	GAAGCTTGGCTTTGAGACTGGGGTCAGGTATCATGCTTTTACTGAAGCCA										
Mus musculus	Riken	ILMN_202310	ILMN_202310	9130014M22RIK	ri|9130014M22|PX00026O07|AK018622|2171					AK018622	9130014M22Rik		ILMN_1237820	004390307	S	1820	CGGTTAGACAGACTGGGGTCAAGTACTGCAGACCCTAACTCCGGATCCTG										
Mus musculus	RefSeq	ILMN_214410	ILMN_214410	LRRFIP1	NM_008515.1	NM_008515.1		16978	6678721	NM_008515.1	Lrrfip1	NP_032541.1	ILMN_2841753	006960377	S	2406	GGGACGATCCGTGGTGGAACCTACAGTCCCAATGACTCCAGTAGTGTCTC	1	+	92958970-92959019	1qD	Mus musculus leucine rich repeat (in FLII) interacting protein 1 (Lrrfip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AU024550; Fliiap1	AU024550; Fliiap1
Mus musculus	MEEBO	ILMN_186544	ILMN_186544	FBP3	scl0014122.1_142						Fbp3		ILMN_1218248	000450193	S	20	GGTAACATCTACAGCCTTAATGAGGGTTATGCCAAGGACTTTAATCCTGC							The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]	Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3 [goid 42578] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 42132] [evidence IEA]		
Mus musculus	Riken	ILMN_202960	ILMN_202960	RFX1	ri|A930026I21|PX00067G19|AK044607|1893					AK044607	Rfx1		ILMN_1248758	004610608	S	1554	CGTGGAGTTAAAGCTGTGTCGGTGCTAGGAATTGAACCTGGGTCCTCTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221782	ILMN_221782	OTUB2	NM_026580.3	NM_026580.3		68149	146135065	NM_026580.3	Otub2	NP_080856.1	ILMN_2765989	006270164	S	977	TAGCCTCTTGGGTAAAGCCACACTGAACTGAGACCTGTGCCCACTATGGA				12qE	Mus musculus OTU domain, ubiquitin aldehyde binding 2 (Otub2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	OTB2; AI413508; AW557219; 2010015L18Rik; OTU2; 4930586I02Rik	OTB2; AI413508; AW557219; 2010015L18Rik; OTU2; 4930586I02Rik
Mus musculus	RefSeq	ILMN_221782	ILMN_221782	OTUB2	NM_026580.3	NM_026580.3		68149	146135065	NM_026580.3	Otub2	NP_080856.1	ILMN_2740268	004880673	S	2710	GAGTACCCAAGGCCAAGCCCTACAGCTTCCCTCAAGTGAAAACATTTCCC				12qE	Mus musculus OTU domain, ubiquitin aldehyde binding 2 (Otub2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	OTB2; AI413508; AW557219; 2010015L18Rik; OTU2; 4930586I02Rik	OTB2; AI413508; AW557219; 2010015L18Rik; OTU2; 4930586I02Rik
Mus musculus	RefSeq	ILMN_220279	ILMN_220279	A630077B13RIK	NM_175449.3	NM_175449.3		215900	32129246	NM_175449.3	A630077B13Rik	NP_780658.2	ILMN_1249864	005690192	S	783	GTGCTCGAAGCCGAAGGAATGCAACACTCCAAGCAGTAAAGACTGGCAGG	10	-	33846122-33846171	10qB1	Mus musculus RIKEN cDNA A630077B13 gene (A630077B13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_224156	ILMN_224156	SHD	scl50606.7.1_142				6677938	NM_009168	Shd		ILMN_2775742	000060332	S	1297	AGGGGACAAGGGGACCCATGACGCACAGACTTCCTTTAATGCCCTCTAGT								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_204824	ILMN_204824	C630002L24RIK	ri|C630002L24|PX00083J17|AK049836|3065					AK049836	C630002L24Rik		ILMN_1240045	000160192	S	2639	GGTGTGATTGAATGTGACCTTCTGGTGTGCAGGGTTGTGATCCTGTGAAC										
Mus musculus	RefSeq	ILMN_235167	ILMN_235167	ROBO2	NM_175549.4	NM_175549.4		268902	110815825	NM_175549.4	Robo2	NP_780758.3	ILMN_2957782	004390615	S	7853	GCTCAACTACTTCTGTATATTGTGGAAAAAGGGGTGGGGCCGGGGGAATG	16	-	73892695-73892744	16qC3.1	Mus musculus roundabout homolog 2 (Drosophila) (Robo2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	9430089E08Rik; 2600013A04Rik; mKIAA1568; D230004I22Rik	9430089E08Rik; 2600013A04Rik; mKIAA1568; D230004I22Rik
Mus musculus	RefSeq	ILMN_206859	ILMN_235167	ROBO2	NM_175549.4	NM_175549.4		268902	110815825	NM_175549.4	Robo2	NP_780758.3	ILMN_1233193	001030598	S	2869	GTGCCAGGCCAAGGGGATAAAACAGCGACCATGCTCTCGGATGGAGCCAT	16	-	73934049-73934098	16qC3.1	Mus musculus roundabout homolog 2 (Drosophila) (Robo2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	9430089E08Rik; 2600013A04Rik; mKIAA1568; D230004I22Rik	9430089E08Rik; 2600013A04Rik; mKIAA1568; D230004I22Rik
Mus musculus	RefSeq	ILMN_203568	ILMN_235167	ROBO2	NM_175549.4	NM_175549.4		268902	110815825	NM_175549.4	Robo2	NP_780758.3	ILMN_1222581	003060670	S	2558	CGGATGTCGTGAAGCAACCGGCATTTATAGCTGGCATTGGTGGTGCCTGC	16	-	73948523-73948572	16qC3.1	Mus musculus roundabout homolog 2 (Drosophila) (Robo2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]	9430089E08Rik; 2600013A04Rik; mKIAA1568; D230004I22Rik	9430089E08Rik; 2600013A04Rik; mKIAA1568; D230004I22Rik
Mus musculus	RefSeq	ILMN_222950	ILMN_222950	2600010E01RIK	NM_175181.3	NM_175181.3		72446	31560750	NM_175181.3	2600010E01Rik	NP_780390.2	ILMN_2887104	000620066	S	1723	CCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATGGGTGGAA	2	-	101517506-101517555	2qE2	Mus musculus RIKEN cDNA 2600010E01 gene (2600010E01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197072	ILMN_233689	LOC674094	XM_974474.1	XM_974474.1		674094	94393667	XM_974474.1	LOC674094	XP_979568.1	ILMN_1251408	006980168	S	242	GGAGAGGTGGAAGCACAGACTACAATGCAGCTTTCATGTCCAGACTGAGC					PREDICTED: Mus musculus similar to Ig heavy chain V region MC101 precursor (LOC674094), mRNA.					
Mus musculus	RefSeq	ILMN_196860	ILMN_330763	EG209550	XM_001477981.1	XM_001477981.1		209550	149262782	XM_001477981.1	EG209550	XP_001478031.1	ILMN_1248183	005570382	S	2855	AGACATGCAGTCGTCCAATTAGGGTTGGCTTGTCAAGAAGAGCTAGGCTG	12	+	11469414-11469463	12qA1.1	PREDICTED: Mus musculus predicted gene, EG209550 (EG209550), mRNA.					
Mus musculus	RefSeq	ILMN_209037	ILMN_228959	CALR4	NM_001033226.2	NM_001033226.2		108802	141803566	NM_001033226.2	Calr4	NP_001028398.1	ILMN_1226822	002850113	S	1344	GGATGAACTGTAACTGCACAGACACTGGGTGTGGCCGAAGTCAGAGACGG	4	+	108926594-108926606:108926607-108926643	4qC7	Mus musculus calreticulin 4 (Calr4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU017583; 4933403L16Rik	AU017583; 4933403L16Rik
Mus musculus	RefSeq	ILMN_234941	ILMN_234941	GM885	NM_001033435.1	NM_001033435.1		380732	85701946	NM_001033435.1	Gm885	NP_001028607.1	ILMN_2988199	005960678	S	1101	TATCTTGGGGCCGAGGAGGTGGTTCAGCAGTTAAGAGCAGACACTAGGGC	11	+	106583439-106583488	11qE1	Mus musculus gene model 885, (NCBI) (Gm885), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_209104	ILMN_209104	KCNC1	NM_008421.2	NM_008421.2		16502	76677931	NM_008421.2	Kcnc1	NP_032447.1	ILMN_1239595	000060121	S	1576	CCACAGTACTCAGAGTGACACATGCCCGCTGGCCCAGGAAGAAATTTTAG	7	+	53683585-53683634	7qB4	Mus musculus potassium voltage gated channel, Shaw-related subfamily, member 1 (Kcnc1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	Kcr2-1; KV4; Kv3.1; Shaw; NGK2; KShIIIB; C230009H10Rik	Kcr2-1; KV4; Kv3.1; Shaw; NGK2; KShIIIB; C230009H10Rik
Mus musculus	RefSeq	ILMN_220117	ILMN_209104	KCNC1	NM_008421.2	NM_008421.2		16502	76677931	NM_008421.2	Kcnc1	NP_032447.1	ILMN_2717814	006510681	S	6519	GTGCCAGAGTTTCCCTAATAGCTGGCCTTTCTGGTTCCGAGTCAATCAGG	7	+	53688528-53688577	7qB4	Mus musculus potassium voltage gated channel, Shaw-related subfamily, member 1 (Kcnc1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	Kcr2-1; KV4; Kv3.1; Shaw; NGK2; KShIIIB; C230009H10Rik	Kcr2-1; KV4; Kv3.1; Shaw; NGK2; KShIIIB; C230009H10Rik
Mus musculus	RefSeq	ILMN_214129	ILMN_214129	HIST1H1T	NM_010377.2	NM_010377.2		107970	112807206	NM_010377.2	Hist1h1t	NP_034507.2	ILMN_2644569	003140093	S	575	GTGCAGCAACGTAAAAGCCCCGCCAAAGCCAGGGCAGCAAACCCCAATTC	13	+	23788254-23788303	13qA3.1	Mus musculus histone cluster 1, H1t (Hist1h1t), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IGI]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	H1t; H1ft	H1t; H1ft
Mus musculus	RefSeq	ILMN_209364	ILMN_209364	PPP1CA	NM_031868.1	NM_031868.1		19045	13994194	NM_031868.1	Ppp1ca	NP_114074.1	ILMN_2960071	006760605	S	1078	AAATCATGCTGCCATGGGTCACACTGGCCTCTCAGGCCCACCCGTCACGG	19	+	4195134-4195183	19qA	Mus musculus protein phosphatase 1, catalytic subunit, alpha isoform (Ppp1ca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence TAS]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle in the female germline [goid 7143] [evidence TAS]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISS]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence TAS]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	dism2; Ppp1c	dism2; Ppp1c
Mus musculus	RefSeq	ILMN_222939	ILMN_222939	SHE	NM_172530.2	NM_172530.2		214547	85662386	NM_172530.2	She	NP_766118.2	ILMN_2757019	002630240	S	2215	GGCCCCCAGATGAAAGTGTTACCAGTGTAATCAAGAGGTGGCATCCTTTC	3	+	89659238-89659287	3qF1	Mus musculus src homology 2 domain-containing transforming protein E (She), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC130415; 9430022A14	MGC130415; 9430022A14
Mus musculus	MEEBO	ILMN_191455	ILMN_191455	A430110M15RIK	scl36819.1.986_183						A430110M15Rik		ILMN_2479216	004200603	S	10	CACCGCTTAACCACACTCAGTTCTTCCCACCATTTTAATAGAAAAACTAG										
Mus musculus	RefSeq	ILMN_184231	ILMN_228801	LOC675735	XM_984731.1	XM_984731.1		675735	94377619	XM_984731.1	LOC675735	XP_989825.1	ILMN_2416936	002320463	S	1500	GGTCGAGTTCTCCGAATCGTTTAGATTGTAATCTTGCACAGAAGAGTTAT					PREDICTED: Mus musculus similar to Ig kappa chain V-V region L6 precursor (LOC675735), mRNA.					
Mus musculus	Riken	ILMN_206110	ILMN_206110	SOD1	ri|B430204E11|PX00071C21|AK080908|3394					AK080908	Sod1		ILMN_1236313	003610008	S	3049	TCCTGGAGTTGAGGACACCAGCCCTGGCCCTTGGGAACAAGCCATCTAAC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function [goid 1895] [evidence IMP]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction [goid 60087] [evidence IMP]; The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 50665] [evidence IMP]; The process by which the structure and material content of mature peripheral nervous system myelin is kept in a functional state [goid 32287] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an axon injury stimulus [goid 48678] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IGI]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence TAS]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IMP]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IMP]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence TAS]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IMP]		
Mus musculus	Riken	ILMN_204964	ILMN_204964	6330513N08RIK	ri|6330513N08|PX00042N02|AK031967|2703					AK031967	6330513N08Rik		ILMN_2568955	005890543	S	173	CGCGCAGGATCTGGGTGCCCGAGAGGTTCTGGGAGAGGTGAGAAGTCAGA										
Mus musculus	RefSeq	ILMN_210154	ILMN_321767	LOC675815	XM_001475482.1	XM_001475482.1		675815	149268406	XM_001475482.1	LOC675815	XP_001475532.1	ILMN_1234717	006650296	S	875	AACCTGCGGTGAGGATTAACGGAACCGCGCGTCACGCCGCATGGAACAGA	17	-	10513084-10513094:10513095-10513133	17qA1	PREDICTED: Mus musculus similar to quaking type II (LOC675815), mRNA.					
Mus musculus	RefSeq	ILMN_215564	ILMN_215564	RALY	NM_023130.2	NM_023130.2		19383	145301569	NM_023130.2	Raly	NP_075619.1	ILMN_2684494	006180670	S	1521	GTGCTACATCCTTTGCAAGTGGAGTTACTGGCCTACCCTTACCCCATGCA				2qH1	Mus musculus hnRNP-associated with lethal yellow (Raly), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI663842; Merc	AI663842; Merc
Mus musculus	RefSeq	ILMN_215564	ILMN_215564	RALY	NM_023130.2	NM_023130.2		19383	145301569	NM_023130.2	Raly	NP_075619.1	ILMN_1237206	002760064	S	418	GCTGACCCTGTAACTCAAAGGACAAACTAGCTGGCTAAACTCATTCTTGG				2qH1	Mus musculus hnRNP-associated with lethal yellow (Raly), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI663842; Merc	AI663842; Merc
Mus musculus	RefSeq	ILMN_196896	ILMN_196896	LOC211193	XM_126851.4	XM_126851.4			38049445	XM_126851.4	LOC211193		ILMN_2526177	006250674	S	690	ACTGTTGCTCACAGACTGAGCTATTGTTGCCATTGAGAACTCTGCTGACC										
Mus musculus	RefSeq	ILMN_218635	ILMN_218635	OLFR982	NM_146854.1	NM_146854.1		258853	22129156	NM_146854.1	Olfr982	NP_667065.1	ILMN_2698350	000070279	S	756	GGTGCTCCTGTATTACATGCCCCCGGTCTGTATCTACCTGCAGCCAAGCT	9	+	39882637-39882686	9qA5.1	Mus musculus olfactory receptor 982 (Olfr982), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC129255; MOR223-4	MGC129255; MOR223-4
Mus musculus	Riken	ILMN_207062	ILMN_207062	6030446B09RIK	ri|6030446B09|PX00646I14|AK077924|2673					AK077924	6030446B09Rik		ILMN_1258593	000540176	S	2273	CCTGGGAGATGGGGGAGGCGGAGCTAGAAGAAATGAGATCAGTGGTAGTG										
Mus musculus	RefSeq	ILMN_221331	ILMN_221331	BTC	NM_007568.3	NM_007568.3		12223	141803221	NM_007568.3	Btc	NP_031594.1	ILMN_2734097	006960504	S	2281	GCTGCCCATACTTGATTCAGATTCGTGTCTTATTTAGTCTTCTTGGGCTC	5	-	91786751-91786800	5qE2	Mus musculus betacellulin, epidermal growth factor family member (Btc), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence ISS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188964	ILMN_188964	UNC50	NM_026123.3	NM_026123.3		67387	83921615	NM_026123.3	Unc50	NP_080399.1	ILMN_2457194	002600747	S	883	ATACATTTATTGGATATTTAGTTGGAAATACCTTATGGTTGATTGCTGTT	1	+	37494237-37494286	1qB	Mus musculus unc-50 homolog (C. elegans) (Unc50), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	URP; GMH1; UNCL; 1110002A21Rik	URP; GMH1; UNCL; 1110002A21Rik
Mus musculus	Riken	ILMN_206525	ILMN_206525	D930018F03RIK	ri|D930018F03|PX00201D20|AK086282|2732					AK086282	D930018F03Rik		ILMN_2580744	005570095	S	2331	GGGGGCGTCAGGTATCTGGAGGTCAAGTAGGATGCTGACAGTTTGGGCTA										
Mus musculus	RefSeq	ILMN_199950	ILMN_199950	LOC381592	XM_358628.1	XM_358628.1			38079173	XM_358628.1	LOC381592		ILMN_1246597	004250435	S	658	AATGAATGCGCACCAATCGCCCTGAACTCCACACTCCAGCGAGGGGTGAG										
Mus musculus	RefSeq	ILMN_191800	ILMN_212896	SORBS2	NM_172752.3	NM_172752.3		234214	124301205	NM_172752.3	Sorbs2	NP_766340.3	ILMN_2482301	007200040	S	3056	CCCTGAAAGACATTTGCGACCAAATAAAAGCCGAAAAGCGGAGGGGAAGC	8	+	46881607-46881656	8qB1.1	Mus musculus sorbin and SH3 domain containing 2 (Sorbs2), mRNA. XM_896530 XM_896538 XM_896544 XM_896551 XM_896561 XM_896567 XM_896585 XM_896594 XM_896601 XM_896604 XM_896609 XM_896621 XM_896626 XM_896630 XM_896637 XM_896659 XM_896669 XM_896678 XM_896713 XM_896726 XM_919615 XM_919623 XM_919630 XM_919640 XM_919683 XM_919690 XM_919696 XM_919704 XM_919710 XM_919716 XM_919726 XM_919733 XM_919739 XM_919746 XM_919751 XM_919756 XM_919765 XM_919776 XM_919786 XM_919793 XM_919805 XM_919812 XM_919825 XM_919853 XM_919862 XM_989416 XM_989451 XM_989479 XM_989508 XM_989536 XM_989562 XM_989624 XM_989644 XM_989675 XM_989712 XM_989752 XM_989782 XM_989821 XM_989848 XM_989880 XM_989908 XM_989942 XM_989979 XM_990018 XM_990081 XM_990104 XM_990136 XM_990162 XM_990189 XM_990220 XM_990249 XM_990279 XM_990308 XM_990334 XM_990363 XM_990390 XM_990418 XM_990437 XM_991379 XM_991540 XM_991617 XM_991693 XM_991825 XM_991875 XM_992031 XM_993354 XM_993406 XM_993497 XM_993552 XM_993630 XM_993781	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			A530071H08; 9430041O17Rik; 2010203O03Rik; Argbp2; mKIAA0777	A530071H08; 9430041O17Rik; 2010203O03Rik; Argbp2; mKIAA0777
Mus musculus	RefSeq	ILMN_212896	ILMN_212896	SORBS2	NM_172752.3	NM_172752.3		234214	124301205	NM_172752.3	Sorbs2	NP_766340.3	ILMN_1235808	007550603	S	359	GTGGGTGTGCTCGCAAACGTGCCGCCATGTCTGTTACGTTAACATCTGTG	8	+	46826847-46826896	8qB1.1	Mus musculus sorbin and SH3 domain containing 2 (Sorbs2), mRNA. XM_896530 XM_896538 XM_896544 XM_896551 XM_896561 XM_896567 XM_896585 XM_896594 XM_896601 XM_896604 XM_896609 XM_896621 XM_896626 XM_896630 XM_896637 XM_896659 XM_896669 XM_896678 XM_896713 XM_896726 XM_919615 XM_919623 XM_919630 XM_919640 XM_919683 XM_919690 XM_919696 XM_919704 XM_919710 XM_919716 XM_919726 XM_919733 XM_919739 XM_919746 XM_919751 XM_919756 XM_919765 XM_919776 XM_919786 XM_919793 XM_919805 XM_919812 XM_919825 XM_919853 XM_919862 XM_989416 XM_989451 XM_989479 XM_989508 XM_989536 XM_989562 XM_989624 XM_989644 XM_989675 XM_989712 XM_989752 XM_989782 XM_989821 XM_989848 XM_989880 XM_989908 XM_989942 XM_989979 XM_990018 XM_990081 XM_990104 XM_990136 XM_990162 XM_990189 XM_990220 XM_990249 XM_990279 XM_990308 XM_990334 XM_990363 XM_990390 XM_990418 XM_990437 XM_991379 XM_991540 XM_991617 XM_991693 XM_991825 XM_991875 XM_992031 XM_993354 XM_993406 XM_993497 XM_993552 XM_993630 XM_993781	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			A530071H08; 9430041O17Rik; 2010203O03Rik; Argbp2; mKIAA0777	A530071H08; 9430041O17Rik; 2010203O03Rik; Argbp2; mKIAA0777
Mus musculus	RefSeq	ILMN_212896	ILMN_212896	SORBS2	NM_172752.3	NM_172752.3		234214	124301205	NM_172752.3	Sorbs2	NP_766340.3	ILMN_2742379	006900767	S	4727	TATATACATTGTTTCATGCACAGTTATTACAAATCAGGAGCGTTTGGAAA	8	+	46911726-46911775	8qB1.1	Mus musculus sorbin and SH3 domain containing 2 (Sorbs2), mRNA. XM_896530 XM_896538 XM_896544 XM_896551 XM_896561 XM_896567 XM_896585 XM_896594 XM_896601 XM_896604 XM_896609 XM_896621 XM_896626 XM_896630 XM_896637 XM_896659 XM_896669 XM_896678 XM_896713 XM_896726 XM_919615 XM_919623 XM_919630 XM_919640 XM_919683 XM_919690 XM_919696 XM_919704 XM_919710 XM_919716 XM_919726 XM_919733 XM_919739 XM_919746 XM_919751 XM_919756 XM_919765 XM_919776 XM_919786 XM_919793 XM_919805 XM_919812 XM_919825 XM_919853 XM_919862 XM_989416 XM_989451 XM_989479 XM_989508 XM_989536 XM_989562 XM_989624 XM_989644 XM_989675 XM_989712 XM_989752 XM_989782 XM_989821 XM_989848 XM_989880 XM_989908 XM_989942 XM_989979 XM_990018 XM_990081 XM_990104 XM_990136 XM_990162 XM_990189 XM_990220 XM_990249 XM_990279 XM_990308 XM_990334 XM_990363 XM_990390 XM_990418 XM_990437 XM_991379 XM_991540 XM_991617 XM_991693 XM_991825 XM_991875 XM_992031 XM_993354 XM_993406 XM_993497 XM_993552 XM_993630 XM_993781	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			A530071H08; 9430041O17Rik; 2010203O03Rik; Argbp2; mKIAA0777	A530071H08; 9430041O17Rik; 2010203O03Rik; Argbp2; mKIAA0777
Mus musculus	RefSeq	ILMN_210785	ILMN_258156	GRIK1	NM_010348.2	NM_010348.2		14805	142348035	NM_010348.2	Grik1	NP_034478.1	ILMN_1243701	003890370	S	3020	CTGGCTGCAGGACTCGTCCTTTCTGTGTTTGTAGCCATTGGAGAATTCAT	16	-	87914432-87914481	16qC3.3	Mus musculus glutamate receptor, ionotropic, kainate 1 (Grik1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex [goid 8328] [evidence IC ]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity [goid 48172] [evidence TAS]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid [goid 14054] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32230] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA];  [goid 15277] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 15277] [evidence IGI];  [goid 15277] [evidence IDA]	A830007B11Rik; MGC25101; Glur-5; D16Ium24; D16Ium24e; Glur5	A830007B11Rik; MGC25101; Glur-5; D16Ium24; D16Ium24e; Glur5
Mus musculus	RefSeq	ILMN_196111	ILMN_258156	GRIK1	NM_010348.2	NM_010348.2		14805	142348035	NM_010348.2	Grik1	NP_034478.1	ILMN_2521717	002750577	S	3501	AAATTGCTATGTGTGCTTTCTAAATAATAATAAACAAGCGGATTTTGTTT	16	-	87896149-87896198	16qC3.3	Mus musculus glutamate receptor, ionotropic, kainate 1 (Grik1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex [goid 8328] [evidence IC ]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IPI]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity [goid 48172] [evidence TAS]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IDA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IMP]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence IGI]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IGI]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid [goid 14054] [evidence IMP]; Any process that activates, maintains or increases the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32230] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 15277] [evidence IMP];  [goid 15277] [evidence IDA];  [goid 15277] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 15277] [evidence IGI];  [goid 15277] [evidence IDA]	A830007B11Rik; MGC25101; Glur-5; D16Ium24; D16Ium24e; Glur5	A830007B11Rik; MGC25101; Glur-5; D16Ium24; D16Ium24e; Glur5
Mus musculus	RefSeq	ILMN_218179	ILMN_218179	BC054059	NM_145635.2	NM_145635.2		246747	79750561	NM_145635.2	BC054059	NP_663610.1	ILMN_2692644	003180332	S	417	GAGAACACTGGTGACCGATGGCCTTCCCTGGGATCTCCCGTTGTCAGACC	2	+	158333719-158333768	2qH1	Mus musculus cDNA sequence BC054059 (BC054059), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [pmid 15567149] [evidence IEP]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [pmid 16132694] [evidence IEP]; The process whereby a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria [goid 50873] [pmid 15567149] [evidence IEP]		RP23-392P11.2; SMAF1	RP23-392P11.2; SMAF1
Mus musculus	MEEBO	ILMN_209677	ILMN_209677	1700020M10RIK	scl00109011.1_318	NM_053203.1			21735480	NM_053203.1	1700020M10Rik		ILMN_2598144	004200609	S	701	GGACTCTATAACCAGTGGAAGTATTTATCAAGAATGACAAAATAACAAAG										
Mus musculus	RefSeq	ILMN_222562	ILMN_222562	CYP2D34	NM_145474.2	NM_145474.2		223706	100817352	NM_145474.2	Cyp2d34	NP_663449.2	ILMN_2751509	007550392	S	1533	GTCTGTGCTATAATGCGTGAGCAAGGACACTAATTCCAAACATGCTCTGC	15	-	82446434-82446451:82446452-82446483	15qE1	Mus musculus cytochrome P450, family 2, subfamily d, polypeptide 34 (Cyp2d34), mRNA.				MGC18824	MGC18824
Mus musculus	RefSeq	ILMN_208645	ILMN_208645	RNF34	NM_030564.1	NM_030564.1		80751	13385489	NM_030564.1	Rnf34	NP_085041.1	ILMN_2732476	003060521	S	154	AATGAAGTCATGGGAACTGGAGCTGTCCGAGGCCAGCAGGCGGGATTTCC	5	+	123311740-123311789	5qF	Mus musculus ring finger protein 34 (Rnf34), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW536122; MGC7670; BC004042; C88279; AW061037; RIFF	AW536122; MGC7670; BC004042; C88279; AW061037; RIFF
Mus musculus	RefSeq	ILMN_208645	ILMN_208645	RNF34	NM_030564.1	NM_030564.1		80751	13385489	NM_030564.1	Rnf34	NP_085041.1	ILMN_2604922	006100593	S	1574	CACTGTCATGACTGGGTAGTGTGGACTATCCTGAGCCGTAACTGCTCTGA	5	+	123318574-123318623	5qF	Mus musculus ring finger protein 34 (Rnf34), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW536122; MGC7670; BC004042; C88279; AW061037; RIFF	AW536122; MGC7670; BC004042; C88279; AW061037; RIFF
Mus musculus	RefSeq	ILMN_208645	ILMN_208645	RNF34	NM_030564.1	NM_030564.1		80751	13385489	NM_030564.1	Rnf34	NP_085041.1	ILMN_2732475	004150431	S	152	GAATGAAGTCATGGGAACTGGAGCTGTCCGAGGCCAGCAGGCGGGATTTC	5	+	123311738-123311787	5qF	Mus musculus ring finger protein 34 (Rnf34), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW536122; MGC7670; BC004042; C88279; AW061037; RIFF	AW536122; MGC7670; BC004042; C88279; AW061037; RIFF
Mus musculus	RefSeq	ILMN_212550	ILMN_238394	C2CD3	NM_001017985.2	NM_001017985.2		277939	125347499	NM_001017985.2	C2cd3	NP_001017985.2	ILMN_2627713	002630669	S	7489	CTGCTGACCAGAGCCCACCTTCTGCTTAAATAGGACAGGCTATTTTTGCC	7	+	107618346-107618395	7qE3	Mus musculus C2 calcium-dependent domain containing 3 (C2cd3), mRNA. XM_898162 XM_898171 XM_898180 XM_898190 XM_898198 XM_898211 XM_898219 XM_906365 XM_919792 XM_919798 XM_919811 XM_919824 XM_919836 XM_919846 XM_919852 XM_919861 XM_919867 XM_919873 XM_919879 XM_919890 XM_919906					
Mus musculus	RefSeq	ILMN_189253	ILMN_208791	RSBN1	NM_172684.2	NM_172684.2		229675	67906200	NM_172684.2	Rsbn1	NP_766272.2	ILMN_1241205	005130102	S	4834	GCGTTTGATTGTAGGTCTTTGCAGATCCGCTGGTTCCTGAGTGATTGCAC	3	+	103768650-103768699	3qF2.2	Mus musculus rosbin, round spermatid basic protein 1 (Rsbn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA3002; Rsbp; Rsbn; E330004N01; C230004D03Rik; Rosbin	mKIAA3002; Rsbp; Rsbn; E330004N01; C230004D03Rik; Rosbin
Mus musculus	RefSeq	ILMN_208791	ILMN_208791	RSBN1	NM_172684.2	NM_172684.2		229675	67906200	NM_172684.2	Rsbn1	NP_766272.2	ILMN_2589576	000770239	S	6356	ATGTAATAGTGTTTTCTGTGACTAAACTTCATTTTGATTGGCAGCTAAGA	3	+	103770172-103770221	3qF2.2	Mus musculus rosbin, round spermatid basic protein 1 (Rsbn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA3002; Rsbp; Rsbn; E330004N01; C230004D03Rik; Rosbin	mKIAA3002; Rsbp; Rsbn; E330004N01; C230004D03Rik; Rosbin
Mus musculus	Riken	ILMN_203775	ILMN_203775	LTBP3	ri|A230048E14|PX00128G14|AK038587|2674					AK038587	Ltbp3		ILMN_1243018	001820072	S	2380	GCTGGGCAGACCAGATACTCTCATTCACGGAGGTTAGAGAGTGGGTCACC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence ISA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IPI]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197977	ILMN_237123	LOC277203	XM_992155.1	XM_992155.1		277203	94401191	XM_992155.1	LOC277203	XP_997249.1	ILMN_1259140	001990408	S	12	CCTGTGCTTGAACACGAGGGAGAAGGAAGACGACGAGGCTGAGAAAGTGG				16qB3	PREDICTED: Mus musculus similar to transmembrane 4 L six family member 19 (LOC277203), mRNA.					
Mus musculus	Riken	ILMN_202994	ILMN_202994	4732462K23RIK	ri|4732462K23|PX00051J19|AK028853|2438					AK028853	4732462K23Rik		ILMN_2553916	006480068	S	2006	GCTGCATATACAGAGGCATTCCTTTTACTTCCCAGGGTGCTTTTGTGCAC										
Mus musculus	RefSeq	ILMN_236795	ILMN_236795	LOC639910	NM_001039648.1	NM_001039648.1		639910	88900488	NM_001039648.1	LOC639910	NP_001034737.1	ILMN_3105608	003180343	A	1018	GGAAGCCACAAGTGTCCCCAGGAGATGTGGAAAACTACAAAGATACAGAG					Mus musculus hypothetical protein LOC639910 (LOC639910), mRNA.					
Mus musculus	RefSeq	ILMN_197988	ILMN_197988	GPR15	XM_156321.5	XM_156321.5		71223	149267560	XM_156321.5	Gpr15	XP_156321.1	ILMN_1221576	000240095	S	1162	AGGCCTTTTTCACTCCGAGGCTTTGCAGCTGGCCATGAATGTGACTGGGC	16	-	58717972-58718021	16qC1.2	PREDICTED: Mus musculus G protein-coupled receptor 15 (Gpr15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217865	ILMN_217865	NSMAF	NM_010945.1	NM_010945.1		18201	6754897	NM_010945.1	Nsmaf	NP_035075.1	ILMN_2688569	002970554	S	2834	GCTTGTTTGGGACCTCCTTGGAGCAAAAGTCAGTGAGCGGATTCAGGGCC	4	-	6325468-6325517	4qA1	Mus musculus neutral sphingomyelinase (N-SMase) activation associated factor (Nsmaf), mRNA.			Interacting selectively with a death receptor [goid 5123] [evidence TAS]	C630007J05; Fan; AA959567	C630007J05; Fan; AA959567
Mus musculus	RefSeq	ILMN_217865	ILMN_217865	NSMAF	NM_010945.1	NM_010945.1		18201	6754897	NM_010945.1	Nsmaf	NP_035075.1	ILMN_1225324	002490369	S	2823	CTGGTGAGCTGCTTGTTTGGGACCTCCTTGGAGCAAAAGTCAGTGAGCGG	4	-	6325479-6325528	4qA1	Mus musculus neutral sphingomyelinase (N-SMase) activation associated factor (Nsmaf), mRNA.			Interacting selectively with a death receptor [goid 5123] [evidence TAS]	C630007J05; Fan; AA959567	C630007J05; Fan; AA959567
Mus musculus	Riken	ILMN_205945	ILMN_205945	C130090K21RIK	ri|C130090K21|PX00172D18|AK048634|3118					AK048634	C130090K21Rik		ILMN_1237805	003120685	S	2882	ACTCTGTCCTCTGTATGTAACCATCATACTTTATACAAGTCTTCCAGAGC										
Mus musculus	RefSeq	ILMN_197416	ILMN_245572	LOC241621	XM_917314.2	XM_917314.2		241621	94366801	XM_917314.2	LOC241621	XP_922407.1	ILMN_1252353	005050110	S	87	CATCAGTAAGCACTGCAAGCACACAGGCGGCCGCGGGAATGCTGGAGGCA				2qE5	PREDICTED: Mus musculus similar to ribosomal protein L27a-like (LOC241621), mRNA.					
Mus musculus	Riken	ILMN_203799	ILMN_203799	H2-T18	ri|A330027G23|PX00130B13|AK039341|3197					AK039341	H2-T18		ILMN_2560071	004640739	S	2840	GAGCAATTCTCTGGCTTAACTTTCACCGTTTGTTACCAGCTTGCAGGGTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Mus musculus	RefSeq	ILMN_219986	ILMN_219986	OLFR394	NM_147007.1	NM_147007.1		259009	22128928	NM_147007.1	Olfr394	NP_667218.1	ILMN_1219111	005050128	S	574	GTTAATGATTTGATGATACTTATCATGGGAGGGCTCATCATTGTTATTCC	11	-	73701249-73701298	11qB4	Mus musculus olfactory receptor 394 (Olfr394), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR135-8; RP23-360H16.2	MOR135-8; RP23-360H16.2
Mus musculus	RefSeq	ILMN_185414	ILMN_185414	UBD	NM_023137.2	NM_023137.2		24108	13194204	NM_023137.2	Ubd	NP_075626.1	ILMN_2426853	007040170	S	871	GGGGATGACCACGGGGATGCGGTGATGAGAAGCTCAAAGCCGATTTCCTC	17	+	37332650-37332658:37332659-37332699	17qB1	Mus musculus ubiquitin D (Ubd), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		FAT10	FAT10
Mus musculus	Riken	ILMN_202486	ILMN_202486	ITGB4BP	ri|6530402L05|PX00048L01|AK018313|1383					AK018313	Itgb4bp		ILMN_1255935	002230707	S	1170	CCTCCCAGGTTTGGGGATTAGTAGGTGTGTGCCATTATGCCTTTGCAGTC										
Mus musculus	RefSeq	ILMN_218786	ILMN_230891	PDE2A	NM_001008548.2	NM_001008548.2		207728	126723648	NM_001008548.2	Pde2a	NP_001008548.1	ILMN_2740407	000510020	S	3935	TTCAAGGCCATATCCATATGTGCCCCCCGGGGCCTCAGGAGACTCTCCCA	7	+	108661077-108661126	7qE3	Mus musculus phosphodiesterase 2A, cGMP-stimulated (Pde2a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC102210	MGC102210
Mus musculus	Riken	ILMN_204703	ILMN_204703	A530008A08RIK	ri|A530008A08|PX00139D06|AK040657|1867					AK040657	A530008A08Rik		ILMN_1255174	002230369	S	1523	CAGTAAGTCCATGTTCTGCCAACAATCTACTCCTGGGCATAGGGCCTGCC										
Mus musculus	RefSeq	ILMN_184899	ILMN_248534	UNC13B	NM_001081413.1	NM_001081413.1		22249	124487232	NM_001081413.1	Unc13b	NP_001074882.1	ILMN_1220360	001110048	S	6163	GTCAGATGAGCTTCCTGGACCCTTGCTCAGAAACGTGACTTGATCTTTGG	4	+	43277534-43277583	4qA5	Mus musculus unc-13 homolog B (C. elegans) (Unc13b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The formation of SNARE-containing complexes, bringing synaptic vesicle membrane and plasma membranes into close proximity and thereby facilitating membrane fusion [goid 16082] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Phorbol ester/diacylglycerol binding proteins that do not have intrinsic kinase activity [goid 1566] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Munc13-1; Unc13h2; Unc13h1; Unc13a; Munc13-2	Munc13-1; Unc13h2; Unc13h1; Unc13a; Munc13-2
Mus musculus	RefSeq	ILMN_222651	ILMN_222651	CCL4	NM_013652.2	NM_013652.2		20303	126366031	NM_013652.2	Ccl4	NP_038680.1	ILMN_1224472	007150500	S	215	AGCTTTGTGATGGATTACTATGAGACCAGCAGTCTTTGCTCCAAGCCAGC	11	+	83477020-83477069	11qC	Mus musculus chemokine (C-C motif) ligand 4 (Ccl4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	Scya4; Mip1b; Act-2; MIP-1B; AT744.1	Scya4; Mip1b; Act-2; MIP-1B; AT744.1
Mus musculus	RefSeq	ILMN_222651	ILMN_222651	CCL4	NM_013652.2	NM_013652.2		20303	126366031	NM_013652.2	Ccl4	NP_038680.1	ILMN_1223257	006940184	S	561	CCCATGGAGATGGTCCACCATTGCTGTTTCTCTGCTATTGTGGATATGAC	11	+	83478086-83478135	11qC	Mus musculus chemokine (C-C motif) ligand 4 (Ccl4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	Scya4; Mip1b; Act-2; MIP-1B; AT744.1	Scya4; Mip1b; Act-2; MIP-1B; AT744.1
Mus musculus	RefSeq	ILMN_198178	ILMN_198178	GM939	XM_355019.5	XM_355019.5		381104	149269329	XM_355019.5	Gm939	XP_355019.5	ILMN_1219219	006280093	S	476	GTGGCCAGGGCCTCATAAACCTCATCTACTTCTACCACGAGGGGCACCTG					PREDICTED: Mus musculus gene model 939, (NCBI) (Gm939), mRNA.					
Mus musculus	RefSeq	ILMN_213888	ILMN_243340	CEACAM20	NM_027839.1	NM_027839.1		71601	58037244	NM_027839.1	Ceacam20	NP_082115.1	ILMN_1233831	001500358	S	2581	CTGTTAGCTCCAGCTCCTGAGCCTCATGTGCTTATGTGCACACACATAAT	7	+	20576165-20576214	7qA3	Mus musculus CEA-related cell adhesion molecule 20 (Ceacam20), mRNA.				9130012D09Rik	9130012D09Rik
Mus musculus	RefSeq	ILMN_203889	ILMN_243340	CEACAM20	NM_027839.1	NM_027839.1		71601	58037244	NM_027839.1	Ceacam20	NP_082115.1	ILMN_1218495	001580253	S	141	AGCTGGGGGTCTCCATGTGGTCGGAAGTAAGGCTGAGAGAAGGATCACTG	7	+	20553122-20553171	7qA3	Mus musculus CEA-related cell adhesion molecule 20 (Ceacam20), mRNA.				9130012D09Rik	9130012D09Rik
Mus musculus	Riken	ILMN_203955	ILMN_203955	A430080K08RIK	ri|A430080K08|PX00138I05|AK040251|3127					AK040251	A430080K08Rik		ILMN_1255738	000520110	S	2722	GAGCAGGCCCCATAGTGAGAGGTGGCAGCTGATTGGCTGATTCGTAGGTT										
Mus musculus	RefSeq	ILMN_196351	ILMN_196351	1700006H02RIK	NM_173367.1	NM_173367.1			27734055	NM_173367.1	1700006H02Rik		ILMN_1253202	001050520	S	208	GTTGTTGCTGTGGTTTTTGCTGTTATCATTCTCGTCCTTCTCGTAGCAGA										
Mus musculus	RefSeq	ILMN_193576	ILMN_232631	KIF24	NM_024241.2	NM_024241.2		109242	154689822	NM_024241.2	Kif24	NP_077203.2	ILMN_2498470	001190170	S	3929	TCTCCTGTGGTCCCCAGCTGTTCTTCCAAGGCCTTGAGGACATATTGTCC				4qA5	Mus musculus kinesin family member 24 (Kif24), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	9430029L23Rik; 4933425J19Rik	9430029L23Rik; 4933425J19Rik
Mus musculus	RefSeq	ILMN_205201	ILMN_232631	KIF24	NM_024241.2	NM_024241.2		109242	154689822	NM_024241.2	Kif24	NP_077203.2	ILMN_1246973	006290364	S	2310	TTGCTAACAGCCACCACTTAGAAGCCACTCAGGACAGCAAGGTGGGCACA				4qA5	Mus musculus kinesin family member 24 (Kif24), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	9430029L23Rik; 4933425J19Rik	9430029L23Rik; 4933425J19Rik
Mus musculus	MEEBO	ILMN_221740	ILMN_221740	1700019J19RIK	scl37279.3.1_19	XM_358708.1			38090245	XM_358708.1	1700019J19Rik		ILMN_2739732	003460156	S	625	CCACCACACTCCTTCACTTGGAAAGTCCCGACTCTGGCAAAGAGCTGCCC										
Mus musculus	RefSeq	ILMN_212392	ILMN_212392	CES3	NM_053200.2	NM_053200.2		104158	117553603	NM_053200.2	Ces3	NP_444430.2	ILMN_2625893	000670603	S	1777	GCTCTGATCAGGAGGGTCAGCTGTGCTTAAGAACCTGGAGTCAAAGGAGT	8	-	95690110-95690153:95690154-95690159	8qC5	Mus musculus carboxylesterase 3 (Ces3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence TAS]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a long-chain-acyl ethyl ester + H2O = a long-chain carboxylic acid + ethanol [goid 30339] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence TAS]	TGH	TGH
Mus musculus	MEEBO	ILMN_185578	ILMN_185578	MAD	scl28747.6_290				6754603	NM_010751	Mad		ILMN_1232668	006660039	S	1	CCGCGGGTGAAGAATGGGAAGCGCGTTTCCAGATGTTTCTTTCTGTAAAT										
Mus musculus	MEEBO	ILMN_185578	ILMN_185578	MAD	scl28747.6_290				6754603	NM_010751	Mad		ILMN_2428206	003190026	S	11	CCTGCTAAGTTATTTTTGAACACATCTGGAATTCTCCTTCTGGAGACGTC										
Mus musculus	RefSeq	ILMN_201557	ILMN_201557	RPLP2	NM_026020.4	NM_026020.4		67186	111186474	NM_026020.4	Rplp2	NP_080296.3	ILMN_2924140	001450072	S	556	GGCCTTGGCTTTAGACAACTGTCAGGCCCTGTGTGGTGTTTCCTTGCAGC				7qF5	Mus musculus ribosomal protein, large P2 (Rplp2), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2700049I22Rik	2700049I22Rik
Mus musculus	RefSeq	ILMN_201557	ILMN_201557	RPLP2	NM_026020.4	NM_026020.4		67186	111186474	NM_026020.4	Rplp2	NP_080296.3	ILMN_2924136	000240100	S	201	GAACATTGAGGATGTCATCGCTCAGGGTGTTGGCAAGCTGGCCAGTGTGC				7qF5	Mus musculus ribosomal protein, large P2 (Rplp2), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2700049I22Rik	2700049I22Rik
Mus musculus	RefSeq	ILMN_188134	ILMN_231507	4930485B16RIK	XM_989129.1	XM_989129.1		380654	94388537	XM_989129.1	4930485B16Rik	XP_994223.1	ILMN_1220758	007160647	S	263	TGCCAAGCAACGATCTCCCGGCAACCAAGCCACCTGCACGCTCTCCGGAA	10	-	92544335-92544341:92544342-92544384	10qC2	PREDICTED: Mus musculus RIKEN cDNA 4930485B16 gene (4930485B16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188134	ILMN_231507	4930485B16RIK	XM_989129.1	XM_989129.1		380654	94388537	XM_989129.1	4930485B16Rik	XP_994223.1	ILMN_2626659	000160195	S	1328	CGTCGTCTCTGGAAACCTCCCGAAAATATTACAGAGAGGCCACGATAAAG	10	-	92507873-92507873:92507999-92508047	10qC2	PREDICTED: Mus musculus RIKEN cDNA 4930485B16 gene (4930485B16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223712	ILMN_223712	SKAP2	NM_018773.2	NM_018773.2		54353	31980887	NM_018773.2	Skap2	NP_061243.1	ILMN_2936671	004250390	S	1488	CTGTGATTGTACGTGAATCTTAGTCATTGAAGCGCCGGTGAGGGTTGCTG	6	-	51809265-51809314	6qB3	Mus musculus src family associated phosphoprotein 2 (Skap2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]		AA960083; RA70; Saps; 2610021A10Rik; BB137539; mSKAP55R; Scap2; SKAP-HOM	AA960083; RA70; Saps; 2610021A10Rik; BB137539; mSKAP55R; Scap2; SKAP-HOM
Mus musculus	RefSeq	ILMN_198297	ILMN_248324	CPA2	NM_001024698.2	NM_001024698.2		232680	142350483	NM_001024698.2	Cpa2	NP_001019869.1	ILMN_1216566	002970176	S	1096	CCAGTGGCGGAAGCATCGACTGGGCTTATGACCTTGGCATCAAATACTCA	6	+	30514244-30514293	6qA3.3	Mus musculus carboxypeptidase A2, pancreatic (Cpa2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]	MGC107514	MGC107514
Mus musculus	RefSeq	ILMN_218118	ILMN_249991	BCOR	NM_175045.2	NM_175045.2		71458	66792787	NM_175045.2	Bcor	NP_778210.2	ILMN_1228091	006550678	S	5172	CTGGCTTCTGCTCTCAGACGTGCTCAAGAAGTTGAAAATGTCCTCCCGGA	X	-	11614984-11615033	XqA1.1	Mus musculus BCL6 interacting corepressor (Bcor), transcript variant c, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		8430401K06Rik; 5830466J11Rik; mKIAA1575; BcorR; D930024N20Rik	8430401K06Rik; 5830466J11Rik; mKIAA1575; BcorR; D930024N20Rik
Mus musculus	RefSeq	ILMN_202766	ILMN_232538	NELF	NM_001039386.1	NM_001039386.1		56876	86476081	NM_001039386.1	Nelf	NP_001034475.1	ILMN_1231840	006550440	S	937	TCGGTATTCAGGGGCTACGCGGAGAGGAAGCGTCGGAAACGGGAGAATGA	2	+	24913489-24913490:24913773-24913820	2qA3	Mus musculus nasal embryonic LHRH factor (Nelf), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_218626	ILMN_218626	DEFB35	NM_139224.1	NM_139224.1		246084	21218413	NM_139224.1	Defb35	NP_631970.1	ILMN_2698231	000780132	S	207	GGCCTTTGGACCTTGCAAGCCGTGCTGAATGGATGGTCAAGGAGAGAACA	8	+	23051290-23051339	8qA2	Mus musculus defensin beta 35 (Defb35), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	RefSeq	ILMN_197440	ILMN_197440	LOC381432	XM_355390.1	XM_355390.1			38075838	XM_355390.1	LOC381432		ILMN_1251355	004260082	S	480	GAGACACTGTTGCTGCCCGAGCCTTCCTTTAGTTAGAGAGTCACAGGAGC										
Mus musculus	RefSeq	ILMN_201535	ILMN_201535	RPS7	NM_011300.2	NM_011300.2		20115	118130206	NM_011300.2	Rps7	NP_035430.1	ILMN_2916116	001340139	S	58	GGCGATCCGTCAGGGTGAAGCCATGTTCAGCTCGAGCGCCAAGATCGTGA	12	-	29320491-29320519:29320520-29320528:29320721-29320732	12qA2	Mus musculus ribosomal protein S7 (Rps7), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	S7	S7
Mus musculus	RefSeq	ILMN_223304	ILMN_223304	HRK	NM_007545.2	NM_007545.2		12123	87299645	NM_007545.2	Hrk	NP_031571.1	ILMN_1229407	002140278	S	603	CCCTTTCCTTTCCACACGCGCAACCTTGCGATGTGAACTCTGAGACTTCG	5	+	118634724-118634773	5qF	Mus musculus harakiri, BCL2 interacting protein (contains only BH3 domain) (Hrk), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]		harakiri; Bid3; DP5	harakiri; Bid3; DP5
Mus musculus	Riken	ILMN_203124	ILMN_203124	ANXA7	ri|6330545A10|PX00043P12|AK032013|2654					AK032013	Anxa7		ILMN_1246887	006180601	S	2313	AAGTGGATCTGGGGGATGGGCTTCAGGGCTTTTCCAAGCACTTCACCGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of water within a cell [goid 9992] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment [goid 9651] [evidence IMP]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IMP]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190721	ILMN_190721	5730402C02RIK	scl38990.7.773_160				31981943	NM_027442	5730402C02Rik		ILMN_2472708	006590070	S	14	AGGAGAGCTCACAGTGATCTACATCTGGGGGATGATTTCTGGTATGTGTC										
Mus musculus	RefSeq	ILMN_196750	ILMN_196750	H2-T23	NM_010398.1	NM_010398.1		15040	6754147	NM_010398.1	H2-T23	NP_034528.1	ILMN_2777471	007200100	S	816	CCACAAGTGGGCAGCTGTCGTGGTGCCTCTTGGGAAGGAGCAGTATTACA	17	-	35638924-35638973	17qB1	Mus musculus histocompatibility 2, T region locus 23 (H2-T23), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]		T23d; MGC117681; Qed-1; T18c(37); Qa1; H-2T23; 37c; Qa-1; 37b; T23b; T18c	T23d; MGC117681; Qed-1; T18c(37); Qa1; H-2T23; 37c; Qa-1; 37b; T23b; T18c
Mus musculus	RefSeq	ILMN_196750	ILMN_196750	H2-T23	NM_010398.1	NM_010398.1		15040	6754147	NM_010398.1	H2-T23	NP_034528.1	ILMN_2777474	004010154	S	819	CAAGTGGGCAGCTGTCGTGGTGCCTCTTGGGAAGGAGCAGTATTACACAT	17	-	35638921-35638970	17qB1	Mus musculus histocompatibility 2, T region locus 23 (H2-T23), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]		T23d; MGC117681; Qed-1; T18c(37); Qa1; H-2T23; 37c; Qa-1; 37b; T23b; T18c	T23d; MGC117681; Qed-1; T18c(37); Qa1; H-2T23; 37c; Qa-1; 37b; T23b; T18c
Mus musculus	RefSeq	ILMN_218019	ILMN_218019	OLFR731	NM_146363.2	NM_146363.2		258360	115529466	NM_146363.2	Olfr731	NP_666475.2	ILMN_1237599	000630743	S	658	GTGGTGCTTGTCACCATCAGGGGCCACTCCTCAATTGGATCATCTAAGGC	14	-	50857851-50857900	14qC1	Mus musculus olfactory receptor 731 (Olfr731), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR246-5	MOR246-5
Mus musculus	MEEBO	ILMN_190146	ILMN_190146	SCL000416.1_19	scl000416.1_19	AK049709.1			26340445	AK049709.1	scl000416.1_19		ILMN_2467578	002490445	S	18	CCGCTTGGATACTACCCACTTGCTAGCCAAAGCCATCACCGAAACTGCGC										
Mus musculus	RefSeq	ILMN_185712	ILMN_257420	MDM4	NM_008575.3	NM_008575.3		17248	141802331	NM_008575.3	Mdm4	NP_032601.2	ILMN_1227293	002900577	S	3201	CTGTGCTGCAGAACCAGTATTAGGCGTTCTGGACACCTCTTCTATCAAAG	1	-	134886661-134886710	1qE4	Mus musculus transformed mouse 3T3 cell double minute 4 (Mdm4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mdmx; AA414968; AU021806; AU018793; AL023055; C85810; 4933417N07Rik	Mdmx; AA414968; AU021806; AU018793; AL023055; C85810; 4933417N07Rik
Mus musculus	RefSeq	ILMN_185712	ILMN_257420	MDM4	NM_008575.3	NM_008575.3		17248	141802331	NM_008575.3	Mdm4	NP_032601.2	ILMN_2644167	004200315	S	2394	GCAGTGGCCTATGATAAGGCTTGAACAGTAGAGAGGAGGAATGTAGCAGC	1	-	134887468-134887517	1qE4	Mus musculus transformed mouse 3T3 cell double minute 4 (Mdm4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Mdmx; AA414968; AU021806; AU018793; AL023055; C85810; 4933417N07Rik	Mdmx; AA414968; AU021806; AU018793; AL023055; C85810; 4933417N07Rik
Mus musculus	RefSeq	ILMN_222685	ILMN_222685	ZFP810	NM_145612.2	NM_145612.2		235050	118130189	NM_145612.2	Zfp810	NP_663587.1	ILMN_1231164	007650458	S	2787	CTGGGTTTGAGAGTTCTTACACATCACCTGGAGTTTCAACATTCATGCCC	9	-	22081593-22081642	9qA3	Mus musculus zinc finger protein 810 (Zfp810), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BC005471; MGC6652	BC005471; MGC6652
Mus musculus	RefSeq	ILMN_219259	ILMN_219259	MBNL1	NM_020007.3	NM_020007.3		56758	118130522	NM_020007.3	Mbnl1	NP_064391.2	ILMN_2766253	005090156	S	4771	CCCTTCAAACACGTCGCTTTGCTTTTTGTGGACAGCTTGTAGTTTGCCAG	3	+	60432861-60432910	3qD	Mus musculus muscleblind-like 1 (Drosophila) (Mbnl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IDA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [pmid 12915312] [evidence IEP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 12915312] [evidence IEP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 12915312] [evidence IEP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [pmid 12915312] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Mbnl; mKIAA0428	Mbnl; mKIAA0428
Mus musculus	RefSeq	ILMN_219259	ILMN_219259	MBNL1	NM_020007.3	NM_020007.3		56758	118130522	NM_020007.3	Mbnl1	NP_064391.2	ILMN_2724124	000070575	S	72	CGGCCAGTTCCCTTTCCCGTGGCGGGCATCCCGGAGTCGCGATCCCACAA	3	+	60305245-60305294	3qD	Mus musculus muscleblind-like 1 (Drosophila) (Mbnl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IDA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [pmid 12915312] [evidence IEP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 12915312] [evidence IEP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 12915312] [evidence IEP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [pmid 12915312] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Mbnl; mKIAA0428	Mbnl; mKIAA0428
Mus musculus	RefSeq	ILMN_237115	ILMN_237115	CYPT9	NM_001039942.1	NM_001039942.1		664724	90186253	NM_001039942.1	Cypt9	NP_001035031.1	ILMN_2823815	002230300	S	470	GTTCCTAGACCCCGAACGGGTCCAAAGTCCCATGAAACATCAGTGGACGG					Mus musculus cysteine-rich perinuclear theca 9 (Cypt9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]				
Mus musculus	RefSeq	ILMN_216749	ILMN_224420	OLFR507	NM_146743.1	NM_146743.1		258738	22129354	NM_146743.1	Olfr507	NP_666954.1	ILMN_2674844	000290386	S	578	CTGATAACAGTGTCCTGCTAATTCTTGATTCATTTTCTGCTGGCTCCATC	7	+	115765905-115765954	7qE3	Mus musculus olfactory receptor 507 (Olfr507), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR204-7	MOR204-7
Mus musculus	RefSeq	ILMN_212171	ILMN_212171	APBB1	NM_009685.2	NM_009685.2		11785	142363757	NM_009685.2	Apbb1	NP_033815.1	ILMN_2623591	005720577	S	2435	CCAGTGTTTGAGGTAGAGCAAGAGGAACTGGTCCAAGCCAGGCCCCATCC	7	-	112707106-112707155	7qE3	Mus musculus amyloid beta (A4) precursor protein-binding, family B, member 1 (Apbb1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme thymidylate synthase [goid 50760] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence NAS]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of S phase of mitotic cell cycle activity [goid 45749] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IDA]; Interacting selectively with the enzyme histone acetyltransferase [goid 35035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [evidence IDA]	Rir; Fe65	Rir; Fe65
Mus musculus	RefSeq	ILMN_230963	ILMN_230963	HNRNPF	NM_133834.1	NM_133834.1		98758	19527047	NM_133834.1	Hnrnpf	NP_598595.1	ILMN_2829171	007160762	S	699	CACTACCTGTGGACCCGGAAGGCAAGATTACAGGGGAGGCCTTCGTTCAG	6	+	117874211-117874260	6qF1	Mus musculus heterogeneous nuclear ribonucleoprotein F (Hnrnpf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC101981; 4833420I20Rik; AA407306; MGC36971	MGC101981; 4833420I20Rik; AA407306; MGC36971
Mus musculus	RefSeq	ILMN_214104	ILMN_251186	SH3BP2	NM_011893.2	NM_011893.2		24055	31981345	NM_011893.2	Sh3bp2	NP_036023.2	ILMN_1255766	004200204	S	2782	CATTTGGAGGTCAGGGCAGCCAGAGACCTTGGCACTATCTGATTTCATTG	5	+	34906187-34906236	5qB2	Mus musculus SH3-domain binding protein 2 (Sh3bp2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IPI]	3BP2	3BP2
Mus musculus	MEEBO	ILMN_187369	ILMN_187369	MJ-7000-176_2342	MJ-7000-176_2342						MJ-7000-176_2342		ILMN_2443525	003520091	S	17	TGCTATCCCAGTAACTAAGTTTGTAGCTCCAGGGCCAGAGGTAGAGACGC										
Mus musculus	RefSeq	ILMN_201563	ILMN_201563	OLFR811	NM_146552.1	NM_146552.1		258545	33239341	NM_146552.1	Olfr811	NP_666763.1	ILMN_2706226	004180338	S	596	CTTTAGCTGTTATGACACTTGTGATCACCTTGATCTTAGTGATTCTCTCC	10	-	129238934-129238983	10qD3	Mus musculus olfactory receptor 811 (Olfr811), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR110-6	MOR110-6
Mus musculus	RefSeq	ILMN_199013	ILMN_199013	LOC212399	XM_137003.2	XM_137003.2			38090437	XM_137003.2	LOC212399		ILMN_1244312	002120372	S	905	GCATTGCTGACAGGATGCAGGAGATCACAATCATTGCTCCCCCTGAGCGC										
Mus musculus	RefSeq	ILMN_212673	ILMN_212673	EG330403	NM_177885.2	NM_177885.2		330403	31342747	NM_177885.2	EG330403	NP_808553.1	ILMN_2629080	000670035	S	729	AGGACTTATCTCATCCAAGAGAGAGATAAGAGTGGCTGGAGGAAACCGGG	6	+	117533516-117533565		Mus musculus predicted gene, EG330403 (EG330403), mRNA.				C630010N09	C630010N09
Mus musculus	RefSeq	ILMN_199457	ILMN_199457	LOC382575	XM_356577.1	XM_356577.1			38049443	XM_356577.1	LOC382575		ILMN_1232161	001980053	S	800	CTGAGCTCTTTACTCCTGACCTCCCAACTCAGACAGAATGGAGTGGCCTC										
Mus musculus	RefSeq	ILMN_199365	ILMN_199365	NCOA6IP	NM_054089.2	NM_054089.2			24475749	NM_054089.2	Ncoa6ip		ILMN_1253996	001770445	S	1895	CCACCTGAAATAGCTTCTGGTCCAGAGCTGGCTAAATACTGGGCCCAGAG										
Mus musculus	MEEBO	ILMN_185634	ILMN_185634	DNAJC8	scl0076523.1_129				27369492	NM_172400	Dnajc8		ILMN_2775146	006020100	S	974	CTTTCCCCACGGATCCACCAGGATTGAAGGAGCTTCTGACCTAGGCTGAC								Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185634	ILMN_185634	DNAJC8	scl0076523.1_129				27369492	NM_172400	Dnajc8		ILMN_2428704	000670468	S	14	GCCTCCAAATGTGAAGGAAAATAATCCCAACCTGTTCAAACAGGCAGTCT								Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220822	ILMN_220822	BMX	NM_009759.3	NM_009759.3		12169	141802105	NM_009759.3	Bmx	NP_033889.1	ILMN_2727359	006560239	S	1121	CAAGCATTACCACGTGCATACTAATGCTGAAAATAAATTATACCTGGCTG	X	-	160651473-160651522	XqF5	Mus musculus BMX non-receptor tyrosine kinase (Bmx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Etk; Etk/Bmx; Tyro8	Etk; Etk/Bmx; Tyro8
Mus musculus	RefSeq	ILMN_220822	ILMN_220822	BMX	NM_009759.3	NM_009759.3		12169	141802105	NM_009759.3	Bmx	NP_033889.1	ILMN_2762528	005870414	S	76	AGGTTGCGTTCTTGCAGGAGCAGCTTCGCTTCACCGTGGTGGACCCCAGG	X	-	160696000-160696049	XqF5	Mus musculus BMX non-receptor tyrosine kinase (Bmx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Etk; Etk/Bmx; Tyro8	Etk; Etk/Bmx; Tyro8
Mus musculus	RefSeq	ILMN_193941	ILMN_227925	EHF	NM_007914.3	NM_007914.3		13661	76096376	NM_007914.3	Ehf	NP_031940.1	ILMN_2597515	006580390	S	1096	CTGATCAATGAAGAACCGGACGTAAATATCTCAAAGACTACTTTTCTGTG	2	-	103230196-103230245	2qE2	Mus musculus ets homologous factor (Ehf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	AU019492; 9030625L19Rik	AU019492; 9030625L19Rik
Mus musculus	RefSeq	ILMN_198073	ILMN_198073	LOC224487	XM_139718.2	XM_139718.2			38081641	XM_139718.2	LOC224487		ILMN_1215234	000770600	S	697	CAGAAATACTTTGAAAATGAGGAGGTAGGTCTCCTGGCAGCGGGGCAGAG										
Mus musculus	RefSeq	ILMN_185993	ILMN_185993	ZFP449	NM_030139.3	NM_030139.3		78619	118130694	NM_030139.3	Zfp449	NP_084415.1	ILMN_1226584	006020300	S	2190	GAGTGTGGTGACTAGAGTGGGGTGTTCTCTTTATAACTGTATGCTAGGTC	X	+	53617413-53617462	XqA5	Mus musculus zinc finger protein 449 (Zfp449), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	9530049C15Rik	9530049C15Rik
Mus musculus	MEEBO	ILMN_184677	ILMN_184677	SCL0003960.1_24	scl0003960.1_24	AK015791.1			12854265	AK015791.1	scl0003960.1_24		ILMN_1228109	001300564	S	18	CTGGTGTCTGTACTCGGAGCTGAGGAGGAAGAGCGGCCAGAGTGAGAGGA										
Mus musculus	RefSeq	ILMN_190959	ILMN_315732	LOC100045958	XM_001475407.1	XM_001475407.1		100045958	149269972	XM_001475407.1	LOC100045958	XP_001475457.1	ILMN_1224080	004730398	S	4540	GCAGCAGTCATCCAGCCACAGAGGGAGCTAAAGTTAACTAACCAGAACTG					PREDICTED: Mus musculus similar to hCG45299, transcript variant 1 (LOC100045958), mRNA.					
Mus musculus	RefSeq	ILMN_211542	ILMN_315732	LOC100045958	XM_001475407.1	XM_001475407.1		100045958	149269972	XM_001475407.1	LOC100045958	XP_001475457.1	ILMN_1259943	002350315	S	941	CTGCAAGTACTCCGAGGAGATGAAGAAGATTCAAGAGAAACAGAGGGAGA					PREDICTED: Mus musculus similar to hCG45299, transcript variant 1 (LOC100045958), mRNA.					
Mus musculus	RefSeq	ILMN_197315	ILMN_197315	LOC238836	XM_138832.1	XM_138832.1			20898425	XM_138832.1	LOC238836		ILMN_2527694	006560465	S	241	ACAGATCTGCGCTTCCAGAGTGCAGCTATTGGTGCTTTGCAGGAGGCAAT										
Mus musculus	RefSeq	ILMN_223297	ILMN_223297	BACH2	NM_007521.2	NM_007521.2		12014	24762242	NM_007521.2	Bach2	NP_031547.1	ILMN_2819558	003460142	S	3334	CTCCCCTTGTGTTTTCCCCTCGTCTCTGCGGATACTGTACAGCAATGGTC	4	+	32668046-32668095	4qA5	Mus musculus BTB and CNC homology 2 (Bach2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	MGC117590	MGC117590
Mus musculus	RefSeq	ILMN_201530	ILMN_201530	RPL21	NM_019647.5	NM_019647.5		19933	146135015	NM_019647.5	Rpl21	NP_062621.2	ILMN_2688863	002470364	S	1155	CGGCAGTGCTTAGGTTGTAGCCCAGGGTTGGAGTCGGCAGTGACAAGCAA				5qG3	Mus musculus ribosomal protein L21 (Rpl21), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC117917; 8430440E03Rik; MGC107026; MGC107587; MGC107588; MGC107690; L21	MGC117917; 8430440E03Rik; MGC107026; MGC107587; MGC107588; MGC107690; L21
Mus musculus	RefSeq	ILMN_201530	ILMN_201530	RPL21	NM_019647.5	NM_019647.5		19933	146135015	NM_019647.5	Rpl21	NP_062621.2	ILMN_1225201	001260286	S	1528	GGACTCTGCAGATGCCCACCCCAGTCCTTGGTTGTGGTGATTCTGTTAGC				5qG3	Mus musculus ribosomal protein L21 (Rpl21), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC117917; 8430440E03Rik; MGC107026; MGC107587; MGC107588; MGC107690; L21	MGC117917; 8430440E03Rik; MGC107026; MGC107587; MGC107588; MGC107690; L21
Mus musculus	RefSeq	ILMN_201530	ILMN_201530	RPL21	NM_019647.5	NM_019647.5		19933	146135015	NM_019647.5	Rpl21	NP_062621.2	ILMN_1222250	003290050	S	1362	GCCACCTCCATAGGCAATGGAGCTAACATTCTTGCTACAGTGGCCGCAGC				5qG3	Mus musculus ribosomal protein L21 (Rpl21), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC117917; 8430440E03Rik; MGC107026; MGC107587; MGC107588; MGC107690; L21	MGC117917; 8430440E03Rik; MGC107026; MGC107587; MGC107588; MGC107690; L21
Mus musculus	Riken	ILMN_206313	ILMN_206313	D130011K02RIK	ri|D130011K02|PX00182H19|AK083796|2842					AK083796	D130011K02Rik		ILMN_2579182	001660402	S	2328	CGTCACTTTGGGAAAATGGGTGGACTGTGAGACACTCAGCGAAAGTAAAC										
Mus musculus	RefSeq	ILMN_222338	ILMN_222338	HSPB3	NM_019960.1	NM_019960.1		56534	9910271	NM_019960.1	Hspb3	NP_064344.1	ILMN_2748205	002940243	S	494	CGAACACGGGTTTATATCGCGGAGTTTCACCAGACAGTACAAACTGCCAG	13	-	114453324-114453373	13qD2.2	Mus musculus heat shock protein 3 (Hspb3), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]		AI844863; spb3; 2310035K17Rik; Hsbp3; 27kDa	AI844863; spb3; 2310035K17Rik; Hsbp3; 27kDa
Mus musculus	Riken	ILMN_205771	ILMN_205771	D030065J16RIK	ri|D030065J16|PX00181G07|AK051073|2215					AK051073	D030065J16Rik		ILMN_1242971	000780497	S	1872	GGTCCTGGGCAGCTGTTATATAAACCCTAAGAGAACACAAATGGCAGCCC										
Mus musculus	RefSeq	ILMN_199267	ILMN_199267	LOC272683	XM_195289.1	XM_195289.1			25044864	XM_195289.1	LOC272683		ILMN_2534635	005490156	S	243	TCGCTTCACAGGCAGTGGATCTGGAACAGATTTCACTCTCACCATCAGCA										
Mus musculus	RefSeq	ILMN_212322	ILMN_247205	TMEM132C	XM_915891.3	XM_915891.3		208213	149254387	XM_915891.3	Tmem132c	XP_920984.3	ILMN_2625148	002450681	S	4006	GGACAGTCCAGGTCTGTTAGCCTTCTGCCCAAGGAGAGGCACATCTGAAC				5qG1.2	PREDICTED: Mus musculus transmembrane protein 132C, transcript variant 4 (Tmem132c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_204501	ILMN_204501	B230333C16RIK	ri|B230333C16|PX00160D19|AK046006|2404					AK046006	B230333C16Rik		ILMN_1259372	003940022	S	1742	CGTTGGTCAGCAGTATTGTGTGAAGGCTAAGAGACCGGCCCCACAACCAG										
Mus musculus	RefSeq	ILMN_218168	ILMN_218168	MARCH8	NM_027920.4	NM_027920.4		71779	133892872	NM_027920.4	March8	NP_082196.1	ILMN_1242531	005560561	S	4168	GCTGCAGCTCAAGGAAAGCCCAAAGCATAGGGAGAGAAAAGGCACTTGTC	6	+	116359205-116359254	6qE3	Mus musculus membrane-associated ring finger (C3HC4) 8 (March8), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1300017E09Rik; Mir	1300017E09Rik; Mir
Mus musculus	RefSeq	ILMN_212478	ILMN_227640	ADAMTS3	XM_977658.1	XM_977658.1		330119	94376433	XM_977658.1	Adamts3	XP_982752.1	ILMN_1226959	004180079	S	1529	GAGATGTATTCAGGGCTCTGCAGCACTGTCTGCATATCTATTCCCACAGC				5qE1	PREDICTED: Mus musculus ADAM metallopeptidase with thrombospondin type 1 motif, 3, transcript variant 1 (Adamts3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IGI]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IGI]		
Mus musculus	RefSeq	ILMN_204739	ILMN_241856	EG432907	XR_002315.1	XR_002315.1		432907	94397369	XR_002315.1	EG432907		ILMN_1238707	004730114	S	1566	CCATGCCCTGAGATAGGAGGAGGGGGGCTTCAGGCTGCCAAAGTCAATTT	14	+	122851168-122851217	14qE5	PREDICTED: Mus musculus predicted gene, EG432907 (EG432907), misc RNA.					
Mus musculus	RefSeq	ILMN_199432	ILMN_199432	OLFR1373	NM_207227.1	NM_207227.1		211472	46402204	NM_207227.1	Olfr1373	NP_997110.1	ILMN_2719054	002970523	S	839	CACCCCCATGCTCAACCCTCTGATCTATACGCTGAGGAACAAGGATGTGA	11	-	51958142-51958191	11qB1.3	Mus musculus olfactory receptor 1373 (Olfr1373), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123567; GA_x6K02T2QP88-3283154-3284089; MGC140881	MGC123567; GA_x6K02T2QP88-3283154-3284089; MGC140881
Mus musculus	RefSeq	ILMN_199432	ILMN_199432	OLFR1373	NM_207227.1	NM_207227.1		211472	46402204	NM_207227.1	Olfr1373	NP_997110.1	ILMN_2877451	001740435	S	833	CTGTAATCACCCCCATGCTCAACCCTCTGATCTATACGCTGAGGAACAAG	11	-	51958148-51958197	11qB1.3	Mus musculus olfactory receptor 1373 (Olfr1373), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123567; GA_x6K02T2QP88-3283154-3284089; MGC140881	MGC123567; GA_x6K02T2QP88-3283154-3284089; MGC140881
Mus musculus	RefSeq	ILMN_199432	ILMN_199432	OLFR1373	NM_207227.1	NM_207227.1		211472	46402204	NM_207227.1	Olfr1373	NP_997110.1	ILMN_2719055	000580180	S	849	GCTCAACCCTCTGATCTATACGCTGAGGAACAAGGATGTGAAAGGAGCGC	11	-	51958132-51958181	11qB1.3	Mus musculus olfactory receptor 1373 (Olfr1373), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123567; GA_x6K02T2QP88-3283154-3284089; MGC140881	MGC123567; GA_x6K02T2QP88-3283154-3284089; MGC140881
Mus musculus	RefSeq	ILMN_212788	ILMN_212788	PSMA7	NM_011969.1	NM_011969.1		26444	7106388	NM_011969.1	Psma7	NP_036099.1	ILMN_2793488	000290224	S	451	CTCCCAGACTCTATCAGACTGACCCCTCGGGCACATACCATGCTTGGAAG	2	-	179772207-179772207:179772770-179772818	2qH4	Mus musculus proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	C6-I	C6-I
Mus musculus	RefSeq	ILMN_212788	ILMN_212788	PSMA7	NM_011969.1	NM_011969.1		26444	7106388	NM_011969.1	Psma7	NP_036099.1	ILMN_2630328	006020482	S	321	GTGGAGGACCCAGTGACTGTGGAGTACATCACCCGCTACATTGCGAGTCT	2	-	179773436-179773485	2qH4	Mus musculus proteasome (prosome, macropain) subunit, alpha type 7 (Psma7), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	C6-I	C6-I
Mus musculus	RefSeq	ILMN_250390	ILMN_250390	MCFD2	NM_139295.2	NM_139295.2		193813	118129996	NM_139295.2	Mcfd2	NP_647456.1	ILMN_3111298	001230152	A	1328	GAGCGAGGCCTGAGACCATCAGTCACTAAGAGCAGTGGCTAACCTCATCG	17	-	87654423-87654472	17qE4	Mus musculus multiple coagulation factor deficiency 2 (Mcfd2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence ISA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810021C21Rik; LMAN1IP; F5F8D; Sdnsf	1810021C21Rik; LMAN1IP; F5F8D; Sdnsf
Mus musculus	MEEBO	ILMN_216085	ILMN_216085	CARD14	scl0001515.1_108	NM_130886.2			31981537	NM_130886.2	Card14		ILMN_2667164	007320368	S	3235	GGAGTGATCTGGACAGCCTGCTCAGCTGTGTGCGCCTGGCCATTGCAGAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_207314	ILMN_207314	4921520E21RIK	ri|4921520E21|PX00638N08|AK076577|2061					AK076577	4921520E21Rik		ILMN_1243189	001450762	S	1853	ACTGGTCAGATACGCTGGCCCTGGGACCTCTGACTGTAGATAGTTCTGAC										
Mus musculus	RefSeq	ILMN_225959	ILMN_225959	PSPN	NM_008954.1	NM_008954.1		19197	6679510	NM_008954.1	Pspn	NP_032980.1	ILMN_2825886	004920255	S	119	TGGCAGAGACTAGAGGGACCTGGACGCCCCATCAGGGTAACAACCATGTC	17	-	57139182-57139196:57139285-57139319	17qD	Mus musculus persephin (Pspn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Branching of the ureteric bud [goid 1658] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	PSP	PSP
Mus musculus	Riken	ILMN_202558	ILMN_202558	ARPC1A	ri|1110030K07|R000017A10|AK003986|711					AK003986	Arpc1a		ILMN_1248761	006350253	S	651	GCCTTATTTTCCAAAGAGGTGAAATGAGAAAACCGGCCCGGGCCGGCCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Mus musculus	Riken	ILMN_204623	ILMN_204623	USP23	ri|C530015C05|PX00081A16|AK049649|1970					AK049649	Usp23		ILMN_1254123	000160603	S	1623	CGCTGAGTGGCAGTGCTGTATTAGAAAGGCAGGTCAGAGGCACGGGGAGA										
Mus musculus	RefSeq	ILMN_219686	ILMN_219686	E330021D16RIK	NM_175527.2	NM_175527.2		243676	31342102	NM_175527.2	E330021D16Rik	NP_780736.1	ILMN_1236165	003460193	S	1328	CTGAACAAGTGGCTAGACGGGTCTATAAATCCATGGTGCTGAAGCATGAG	6	-	136366449-136366498	6qG1	Mus musculus RIKEN cDNA E330021D16 gene (E330021D16Rik), mRNA.				MGC107419; C85549	MGC107419; C85549
Mus musculus	RefSeq	ILMN_200066	ILMN_227430	LOC239690	XM_920267.3	XM_920267.3		239690	149267723	XM_920267.3	LOC239690	XP_925360.2	ILMN_1223524	006770736	S	1357	CGAGGAAGGACAGAAGAGATGCGAAGGGAACACGAGACAATTTGGGCGTC					PREDICTED: Mus musculus similar to hCG18754, transcript variant 2 (LOC239690), mRNA.					
Mus musculus	RefSeq	ILMN_221001	ILMN_221001	D930014E17RIK	NM_020616.1	NM_020616.1		57373	10181161	NM_020616.1	D930014E17Rik	NP_065641.1	ILMN_2729762	005550521	S	473	GGCGAGACATCTGTTGGACAAGAAAGCATCTACCAAACATCAGAGCATTC	7	+	116847263-116847290:116847458-116847479	7qE3	Mus musculus RIKEN cDNA D930014E17 gene (D930014E17Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ICRFP703B1614Q5.6; D7H11orf17; BCA3; C11orf17; ORF27	ICRFP703B1614Q5.6; D7H11orf17; BCA3; C11orf17; ORF27
Mus musculus	RefSeq	ILMN_198215	ILMN_198215	LOC381119	XM_358510.1	XM_358510.1			38082936	XM_358510.1	LOC381119		ILMN_1212883	002510402	S	282	GTCATTTAGTCAGCTGGACGGCAGGACCGGGTGTCTTGGAAGTCCTAGCC										
Mus musculus	RefSeq	ILMN_211082	ILMN_211082	JMJD5	NM_029842.3	NM_029842.3		77035	146149182	NM_029842.3	Jmjd5	NP_084118.1	ILMN_1244329	004920280	S	1844	CAGGCTGGAAGAGGAGGGCAGCGGAACTACTTTGTTGTGAATGTGGGGAA				7qF3	Mus musculus jumonji domain containing 5 (Jmjd5), mRNA.				3110005O21Rik	3110005O21Rik
Mus musculus	RefSeq	ILMN_218792	ILMN_218792	H13	NM_010376.2	NM_010376.2		14950	31542927	NM_010376.2	H13	NP_034506.1	ILMN_2878620	006200544	S	2868	ACTCCAGATGTGAACCGCCACCGCCTGAGCCCCATGGAAAAATGGCACCA	2	+	152397813-152397862	2qH1	Mus musculus histocompatibility 13 (H13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]	Spp; H-13; AV020344; 4930443L17Rik; 1200006O09Rik; 5031424B04Rik; PSL3	Spp; H-13; AV020344; 4930443L17Rik; 1200006O09Rik; 5031424B04Rik; PSL3
Mus musculus	RefSeq	ILMN_213475	ILMN_213475	ECM1	NM_007899.1	NM_007899.1		13601	6681256	NM_007899.1	Ecm1	NP_031925.1	ILMN_1229746	000620291	S	1062	CCAGTTGCCTTTCCCCCCGGGGTTGCCCACACCGGACAATGTCAAAAACA	3	-	95539918-95539967	3qF2.1	Mus musculus extracellular matrix protein 1 (Ecm1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]			p85; AI663821	p85; AI663821
Mus musculus	RefSeq	ILMN_213475	ILMN_213475	ECM1	NM_007899.1	NM_007899.1		13601	6681256	NM_007899.1	Ecm1	NP_031925.1	ILMN_2947526	001710242	S	1679	CCAACTACCTGAGGAACGTGGCTTTAGTGGCTGGAGACACTGGGAATGCC	3	-	95538234-95538283	3qF2.1	Mus musculus extracellular matrix protein 1 (Ecm1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]			p85; AI663821	p85; AI663821
Mus musculus	RefSeq	ILMN_223254	ILMN_223254	ABCG4	NM_138955.3	NM_138955.3		192663	144926010	NM_138955.3	Abcg4	NP_620405.3	ILMN_1225587	004640079	S	3479	TCCTATATCTGGTTTCTCCTCCTCCAGGACTCTTTCCCCAGTCCCTGTGC	9	-	44081370-44081419	9qA5.2	Mus musculus ATP-binding cassette, sub-family G (WHITE), member 4 (Abcg4), mRNA. XM_989296 XM_989324	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol [goid 45542] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	6430517O04Rik	6430517O04Rik
Mus musculus	RefSeq	ILMN_213525	ILMN_213525	KCTD12B	NM_175429.3	NM_175429.3		207474	40538834	NM_175429.3	Kctd12b	NP_780638.1	ILMN_2759619	003450463	S	3536	GAATATTTGAGCTCAGCTGCCTTAGGTTTTTAGTGAGAGAGGTGCTCATC	X	-	150120906-150120955	XqF3	Mus musculus potassium channel tetramerisation domain containing 12b (Kctd12b), mRNA.			Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	B430319H24Rik; 9530071H11Rik	B430319H24Rik; 9530071H11Rik
Mus musculus	RefSeq	ILMN_213525	ILMN_213525	KCTD12B	NM_175429.3	NM_175429.3		207474	40538834	NM_175429.3	Kctd12b	NP_780638.1	ILMN_2945560	003840259	S	4507	GGCTGCTAAGAGAGGCAGAACTAGTCTTCTTCAGGGACAGAGCCCTGATG	X	-	150119935-150119984	XqF3	Mus musculus potassium channel tetramerisation domain containing 12b (Kctd12b), mRNA.			Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	B430319H24Rik; 9530071H11Rik	B430319H24Rik; 9530071H11Rik
Mus musculus	RefSeq	ILMN_213525	ILMN_213525	KCTD12B	NM_175429.3	NM_175429.3		207474	40538834	NM_175429.3	Kctd12b	NP_780638.1	ILMN_2705004	003850703	S	4681	ACATTGTGAATTTGAGAGGGAGTTGGGAGGAATTGGAGGAAGAGGGGTGG	X	-	150119761-150119810	XqF3	Mus musculus potassium channel tetramerisation domain containing 12b (Kctd12b), mRNA.			Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	B430319H24Rik; 9530071H11Rik	B430319H24Rik; 9530071H11Rik
Mus musculus	RefSeq	ILMN_213525	ILMN_213525	KCTD12B	NM_175429.3	NM_175429.3		207474	40538834	NM_175429.3	Kctd12b	NP_780638.1	ILMN_1220300	000150719	S	4569	CCAAATACTAAACACAAATACATACGACCAATACTAAATGGACAGCAGAG	X	-	150119873-150119922	XqF3	Mus musculus potassium channel tetramerisation domain containing 12b (Kctd12b), mRNA.			Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	B430319H24Rik; 9530071H11Rik	B430319H24Rik; 9530071H11Rik
Mus musculus	RefSeq	ILMN_213525	ILMN_213525	KCTD12B	NM_175429.3	NM_175429.3		207474	40538834	NM_175429.3	Kctd12b	NP_780638.1	ILMN_2945565	006770070	S	4370	TGGCTACACTCATGAAATTTCAACAACGTGAACAGCTGAACAAGCTCAAC	X	-	150120072-150120121	XqF3	Mus musculus potassium channel tetramerisation domain containing 12b (Kctd12b), mRNA.			Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	B430319H24Rik; 9530071H11Rik	B430319H24Rik; 9530071H11Rik
Mus musculus	RefSeq	ILMN_209607	ILMN_209607	CALB2	NM_007586.1	NM_007586.1		12308	34098930	NM_007586.1	Calb2	NP_031612.1	ILMN_2827729	006060138	S	1298	GAGCTACTGTGGAGGGTGACTGCCCTCTCCTTGTGTTCTTGACGTGTGTG	8	-	112666521-112666570	8qE1	Mus musculus calbindin 2 (Calb2), mRNA.	Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CR	CR
Mus musculus	RefSeq	ILMN_209607	ILMN_209607	CALB2	NM_007586.1	NM_007586.1		12308	34098930	NM_007586.1	Calb2	NP_031612.1	ILMN_2597412	006770056	S	350	CCGAAGAGAATTTCCTTTTGTGCTTCAGGCAGCACGTGGGCTCCAGCGCT	8	-	112676541-112676590	8qE1	Mus musculus calbindin 2 (Calb2), mRNA.	Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CR	CR
Mus musculus	Riken	ILMN_204382	ILMN_204382	9830143E02RIK	ri|9830143E02|PX00119A24|AK036626|1991					AK036626	9830143E02Rik		ILMN_1219232	006940681	S	1882	CTGCTCTCCTTTCTAGAAGCAGGACATTTTGGCTCCTTGGCTGCTACCTC										
Mus musculus	RefSeq	ILMN_221262	ILMN_230596	PTPN9	NM_019651.2	NM_019651.2		56294	61098099	NM_019651.2	Ptpn9	NP_062625.2	ILMN_2776413	001440368	S	3621	CTGGGTGGGCCTATGTCTTTATAAAACATAAACTGGGTGGGTCTATGTCT	9	+	56910179-56910228	9qB	Mus musculus protein tyrosine phosphatase, non-receptor type 9 (Ptpn9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	MEG2	MEG2
Mus musculus	RefSeq	ILMN_201583	ILMN_229631	RAP1GAP	NM_001081155.1	NM_001081155.1		110351	124487210	NM_001081155.1	Rap1gap	NP_001074624.1	ILMN_1227577	004730039	S	3141	CTTTGGAAGCCCTGTGGCCACATGTATGTCAGTAAGGGTTGTACAAAATA	4	+	137285705-137285754	4qD3	Mus musculus Rap1 GTPase-activating protein (Rap1gap), mRNA.				1300019I11Rik; Rap1ga1; 2310004O14Rik; AI427470	1300019I11Rik; Rap1ga1; 2310004O14Rik; AI427470
Mus musculus	RefSeq	ILMN_201583	ILMN_229631	RAP1GAP	NM_001081155.1	NM_001081155.1		110351	124487210	NM_001081155.1	Rap1gap	NP_001074624.1	ILMN_1244585	006130041	S	2493	CCCCTCTGGAGCCACGGGGAACAGGGTAGGAAAAGGAGAAGAAGCACCGT	4	+	137285057-137285106	4qD3	Mus musculus Rap1 GTPase-activating protein (Rap1gap), mRNA.				1300019I11Rik; Rap1ga1; 2310004O14Rik; AI427470	1300019I11Rik; Rap1ga1; 2310004O14Rik; AI427470
Mus musculus	RefSeq	ILMN_229631	ILMN_229631	RAP1GAP	NM_001081155.1	NM_001081155.1		110351	124487210	NM_001081155.1	Rap1gap	NP_001074624.1	ILMN_2942117	005130750	S	1001	ACGTGTCCACCAAGCTGCCATACACAGAAGGGGACGCTCAGCAGTTGCAG	4	+	137273916-137273959:137274790-137274795	4qD3	Mus musculus Rap1 GTPase-activating protein (Rap1gap), mRNA.				1300019I11Rik; Rap1ga1; 2310004O14Rik; AI427470	1300019I11Rik; Rap1ga1; 2310004O14Rik; AI427470
Mus musculus	RefSeq	ILMN_188617	ILMN_208795	TOE1	NM_026654.2	NM_026654.2		68276	118129870	NM_026654.2	Toe1	NP_080930.1	ILMN_1229779	001570309	S	51	TCCGCGGCCATGACGCCCCTCGCCAGCCTTCTGGAGGTACGCAGAGACTT	4	-	116479356-116479364:116480073-116480113	4qD1	Mus musculus target of EGR1, member 1 (nuclear) (Toe1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI413517; 4930584N22Rik; 4933424D16Rik	AI413517; 4930584N22Rik; 4933424D16Rik
Mus musculus	RefSeq	ILMN_208795	ILMN_208795	TOE1	NM_026654.2	NM_026654.2		68276	118129870	NM_026654.2	Toe1	NP_080930.1	ILMN_1220416	005870482	S	2	AAGTCTCTGCGTACCTCCAGAAGGCTGGCGAGGGGCGTCATGGCCGCGGA	4	-	116480113-116480124:116480125-116480162	4qD1	Mus musculus target of EGR1, member 1 (nuclear) (Toe1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI413517; 4930584N22Rik; 4933424D16Rik	AI413517; 4930584N22Rik; 4933424D16Rik
Mus musculus	RefSeq	ILMN_208795	ILMN_208795	TOE1	NM_026654.2	NM_026654.2		68276	118129870	NM_026654.2	Toe1	NP_080930.1	ILMN_2957589	006220750	S	1653	GGCTTGTGTTGGTCATTCCAGGAACCTAAGGGCTAAGGCAGGAGGACTGT	4	-	116476913-116476962	4qD1	Mus musculus target of EGR1, member 1 (nuclear) (Toe1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI413517; 4930584N22Rik; 4933424D16Rik	AI413517; 4930584N22Rik; 4933424D16Rik
Mus musculus	RefSeq	ILMN_205116	ILMN_208795	TOE1	NM_026654.2	NM_026654.2		68276	118129870	NM_026654.2	Toe1	NP_080930.1	ILMN_2570117	004570543	S	637	CAGGAACACCAAGTCTATAAGGCCATTATGTAGCACCAGGGGCCGTCGGG	4	-	116478196-116478245	4qD1	Mus musculus target of EGR1, member 1 (nuclear) (Toe1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI413517; 4930584N22Rik; 4933424D16Rik	AI413517; 4930584N22Rik; 4933424D16Rik
Mus musculus	RefSeq	ILMN_213821	ILMN_232956	LOC677144	XM_001004138.1	XM_001004138.1		677144	94385758	XM_001004138.1	LOC677144	XP_001004138.1	ILMN_2641150	000130370	S	1558	CATACTGGAGGTGCTGTGGGTGCCAGTAGTGTCCTGCTGGTCCTTCCTGA					PREDICTED: Mus musculus similar to serine beta lactamase-like protein LACT-1, transcript variant 2 (LOC677144), mRNA.					
Mus musculus	RefSeq	ILMN_252049	ILMN_252049	OLFR145	NM_146313.1	NM_146313.1		258310	49170037	NM_146313.1	Olfr145	NP_666425.1	ILMN_3160663	002750403	S	540	TCTCCCTCTTCTGGAACGCTCTTGCACCAGCACCTATGTAAATGAGCTGG	9	+	37705530-37705579	9qA4	Mus musculus olfactory receptor 145 (Olfr145), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	K21; MOR161-6	K21; MOR161-6
Mus musculus	RefSeq	ILMN_238639	ILMN_238639	GM1968	NM_001033403.1	NM_001033403.1		328657	75677461	NM_001033403.1	Gm1968	NP_001028575.1	ILMN_2901112	005050364	S	470	ATAACTCCAACTTCAGGGGAACCCAATGCCTCTGACCTCCGTGGGCACCC	16	-	29878489-29878538	16qB2	Mus musculus gene model 1968, (NCBI) (Gm1968), mRNA.					
Mus musculus	RefSeq	ILMN_205094	ILMN_218805	SPECC1L	NM_153406.2	NM_153406.2		74392	49274626	NM_153406.2	Specc1l	NP_700455.2	ILMN_1227250	000110553	S	715	CTATTATTGCTCACCAGCCTACTGACGTGGAGTCTACTCTCCTGCAGCTG	10	+	74708208-74708257	10qC1	Mus musculus SPECC1-like (Specc1l), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		cytospin A; AI317249; 9530057A13Rik; 4930470P14Rik; 4932439K10Rik; mKIAA0376	cytospin A; AI317249; 9530057A13Rik; 4930470P14Rik; 4932439K10Rik; mKIAA0376
Mus musculus	RefSeq	ILMN_218805	ILMN_218805	SPECC1L	NM_153406.2	NM_153406.2		74392	49274626	NM_153406.2	Specc1l	NP_700455.2	ILMN_2700448	002810091	S	5717	GGGCTGTTTCCTGGGAAGCTCTAAGATGTAAGCTCGCCTCTTCCTAAAGC	10	+	74774961-74775010	10qC1	Mus musculus SPECC1-like (Specc1l), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		cytospin A; AI317249; 9530057A13Rik; 4930470P14Rik; 4932439K10Rik; mKIAA0376	cytospin A; AI317249; 9530057A13Rik; 4930470P14Rik; 4932439K10Rik; mKIAA0376
Mus musculus	RefSeq	ILMN_223552	ILMN_236658	2300009A05RIK	XM_898537.2	XM_898537.2		69478	94386166	XM_898537.2	2300009A05Rik	XP_903630.1	ILMN_1225386	004560386	S	506	GGAAAACACAAATGTCAATGAATTTGTTCCCCTGTGTGTGTGTATGCAGT	9	-	63242293-63242342	9qC	PREDICTED: Mus musculus RIKEN cDNA 2300009A05 gene, transcript variant 3 (2300009A05Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_217734	ILMN_247369	OLFR23	NM_010970.1	NM_010970.1		18321	66472355	NM_010970.1	Olfr23	NP_035100.1	ILMN_2686943	002810201	S	758	GGTCAGTCATTGTTCTGTACTTATGTCCATCATCTAATAACTCTACTGTG	11	+	73754507-73754556	11qB4	Mus musculus olfactory receptor 23 (Olfr23), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MTPCR50; MOR135-27	MTPCR50; MOR135-27
Mus musculus	RefSeq	ILMN_189474	ILMN_189474	XTRP3S1	NM_139142.1	NM_139142.1		102680	20982824	NM_139142.1	Xtrp3s1	NP_631881.1	ILMN_1244812	003120196	S	2262	TCTTTAAAGTCACAATGAATATGTAATTTCTCTGTTCCCTGACTACTCTC	9	-	123545620-123545669	9qF4	Mus musculus X transporter protein 3 similar 1 gene (Xtrp3s1), mRNA.				Xt3s1; AU022428; A730081N20Rik	Xt3s1; AU022428; A730081N20Rik
Mus musculus	RefSeq	ILMN_199239	ILMN_248201	1810043H04RIK	XM_903145.3	XM_903145.3		208501	149262528	XM_903145.3	1810043H04Rik	XP_908238.1	ILMN_1241445	006370110	S	371	CTGCCCATGGTTCAGGGTGGGAGGAACCATTACACAGCAGGAACTCTGCT	11	+	119961615-119961664	11qE2	PREDICTED: Mus musculus RIKEN cDNA 1810043H04 gene, transcript variant 2 (1810043H04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_191736	ILMN_248201	1810043H04RIK	XM_903145.3	XM_903145.3		208501	149262528	XM_903145.3	1810043H04Rik	XP_908238.1	ILMN_1245809	005960427	S	47	TCATGTCTGTGAACGGAGCGGTGTGGGGGCGTGTGCGGAGCCGTTTCCGA	11	+	119960294-119960295:119960296-119960343	11qE2	PREDICTED: Mus musculus RIKEN cDNA 1810043H04 gene, transcript variant 2 (1810043H04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199430	ILMN_199430	OLFR325	NM_207153.1	NM_207153.1		258261	46391068	NM_207153.1	Olfr325	NP_997036.1	ILMN_2648301	001110373	S	900	GAAACTGTTGGGTGTGAAACCCTTCTTTCAAGAATCTTTAAAGGAAGTCA	11	+	58395265-58395314	11qB1.3	Mus musculus olfactory receptor 325 (Olfr325), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-128D9.3; MOR275-5	RP23-128D9.3; MOR275-5
Mus musculus	RefSeq	ILMN_197649	ILMN_324253	PDZRN4	XM_001481302.1	XM_001481302.1		239618	149267087	XM_001481302.1	Pdzrn4	XP_001481352.1	ILMN_1230674	007330537	S	597	GGCGCAGGTCAGCTTGTTGCAGCGCAGGTATCAGGAGAAGTTGGCTCTGT				15qE3	PREDICTED: Mus musculus PDZ domain containing RING finger 4 (Pdzrn4), mRNA.					
Mus musculus	RefSeq	ILMN_199775	ILMN_324253	PDZRN4	XM_001481302.1	XM_001481302.1		239618	149267087	XM_001481302.1	Pdzrn4	XP_001481352.1	ILMN_2536446	005810138	S	1262	TCGAGCTGTGTCGTGTTAGCAGTCAAGAGAAGCTGGGCCTGACAGTCTGC				15qE3	PREDICTED: Mus musculus PDZ domain containing RING finger 4 (Pdzrn4), mRNA.					
Mus musculus	RefSeq	ILMN_197651	ILMN_324253	PDZRN4	XM_001481302.1	XM_001481302.1		239618	149267087	XM_001481302.1	Pdzrn4	XP_001481352.1	ILMN_1239949	000290193	S	2960	AAGAGAGCCCACAGAGCAGCGGCGAAGGCAAGAAGGAGCTGAGCATCATC				15qE3	PREDICTED: Mus musculus PDZ domain containing RING finger 4 (Pdzrn4), mRNA.					
Mus musculus	RefSeq	ILMN_197650	ILMN_324253	PDZRN4	XM_001481302.1	XM_001481302.1		239618	149267087	XM_001481302.1	Pdzrn4	XP_001481352.1	ILMN_1253021	007650463	S	998	CCCTCAGCCGGCCAACATACGGCATGACTCCGGAAGTACAGCTCACGAAT				15qE3	PREDICTED: Mus musculus PDZ domain containing RING finger 4 (Pdzrn4), mRNA.					
Mus musculus	RefSeq	ILMN_184965	ILMN_324253	PDZRN4	XM_001481302.1	XM_001481302.1		239618	149267087	XM_001481302.1	Pdzrn4	XP_001481352.1	ILMN_1249150	005560553	S	3607	ACCACATGCCGTATCTTGTCTTATACATGAAGCAGCACCCCTTGAACATC				15qE3	PREDICTED: Mus musculus PDZ domain containing RING finger 4 (Pdzrn4), mRNA.					
Mus musculus	RefSeq	ILMN_219327	ILMN_250324	SLC6A18	NM_001040692.2	NM_001040692.2		22598	148747296	NM_001040692.2	Slc6a18	NP_001035782.1	ILMN_2707290	002100411	S	1922	CGGAGAACTAGGGTAGATCAGGGTTGGGAGGAAGACCTGTGCCCACTCAG				13qC1	Mus musculus solute carrier family 6 (neurotransmitter transporter), member 18 (Slc6a18), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence TAS]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence TAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	Xtrp2; XT2; D630001K16Rik	Xtrp2; XT2; D630001K16Rik
Mus musculus	RefSeq	ILMN_219569	ILMN_219569	DBNL	NM_013810.2	NM_013810.2		13169	118130876	NM_013810.2	Dbnl	NP_038838.1	ILMN_2710604	006860452	S	2030	GCCCCGCTTGTGACCTGAATGGGGGAGAAATCCAAGCTTAGGCTCTGTAT	11	+	5700700-5700749	11qA1	Mus musculus drebrin-like (Dbnl), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence IDA]; The process by which an actin filament is broken down into smaller filaments [goid 51014] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	mAbp1; SH3P7; Abp1	mAbp1; SH3P7; Abp1
Mus musculus	RefSeq	ILMN_197986	ILMN_246829	LOC672752	XR_003984.1	XR_003984.1		672752	94401313	XR_003984.1	LOC672752		ILMN_1255977	005090326	S	1193	ACTCATCTTGATGCCTATTCACCAGATGGTACAACATTGGAGCCTGGTAG					PREDICTED: Mus musculus hypothetical protein LOC672752 (LOC672752), mRNA.					
Mus musculus	RefSeq	ILMN_221690	ILMN_221690	PEX7	NM_008822.1	NM_008822.1		18634	6679282	NM_008822.1	Pex7	NP_032848.1	ILMN_2739118	004780221	S	626	GGATGTGAAGACCACAGGAGTACGGATTGTGATTCCAGCACATCAGACGG	10	-	19608479-19608528	10qA3	Mus musculus peroxisome biogenesis factor 7 (Pex7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of directing proteins towards the peroxisome using signals contained within the protein [goid 6625] [evidence IMP]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [evidence ISO]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MmPEX7	MmPEX7
Mus musculus	RefSeq	ILMN_221690	ILMN_221690	PEX7	NM_008822.1	NM_008822.1		18634	6679282	NM_008822.1	Pex7	NP_032848.1	ILMN_2739123	006840671	S	640	AGGAGTACGGATTGTGATTCCAGCACATCAGACGGAAATCCTGAGCTGTG	10	-	19608465-19608514	10qA3	Mus musculus peroxisome biogenesis factor 7 (Pex7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of directing proteins towards the peroxisome using signals contained within the protein [goid 6625] [evidence IMP]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [evidence ISO]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MmPEX7	MmPEX7
Mus musculus	RefSeq	ILMN_184550	ILMN_238004	MAP3K9	NM_177395.4	NM_177395.4		338372	118130417	NM_177395.4	Map3k9	NP_796369.2	ILMN_1259256	003290669	S	2975	CCATGCTGGGATGATGGTTCGCTGCCTTCCACGTCATCTACTTAATCCTC	12	-	82829601-82829650	12qD1	Mus musculus mitogen-activated protein kinase kinase kinase 9 (Map3k9), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]	E130314H24Rik; Mlk1; Prke1	E130314H24Rik; Mlk1; Prke1
Mus musculus	RefSeq	ILMN_209292	ILMN_209292	F830045P16RIK	NM_177653.3	NM_177653.3		228592	112821686	NM_177653.3	F830045P16Rik	NP_808321.1	ILMN_1218284	007570326	S	1744	CAGACTCAAGATACTGAATCTCAAATGATCTCTTCTTACAACCAAAAGGC	2	-	129284226-129284275	2qF1	Mus musculus RIKEN cDNA F830045P16 gene (F830045P16Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	RP23-384K11.5	RP23-384K11.5
Mus musculus	RefSeq	ILMN_223336	ILMN_225497	BC021767	XM_619932.3	XM_619932.3		545551	94369775	XM_619932.3	BC021767	XP_619932.3	ILMN_1237713	003060379	S	2936	CATCAATGACTTCTATATCATGATTTAAAAGAAGATATTCTGCAGATCAG	3	-	94464572-94464621	3qF2.1	PREDICTED: Mus musculus cDNA sequence BC021767 (BC021767), mRNA.					
Mus musculus	RefSeq	ILMN_186838	ILMN_225497	BC021767	XM_619932.3	XM_619932.3		545551	94369775	XM_619932.3	BC021767	XP_619932.3	ILMN_2438918	004900647	S	1726	TAGCTCAGGCTCTGCTCAGGACCACAAACGGGCTTGTGGTCAAGCCTATC	3	-	94465782-94465829:94465830-94465831	3qF2.1	PREDICTED: Mus musculus cDNA sequence BC021767 (BC021767), mRNA.					
Mus musculus	RefSeq	ILMN_209219	ILMN_209219	MRPL23	NM_011288.1	NM_011288.1		19935	6755351	NM_011288.1	Mrpl23	NP_035418.1	ILMN_1236904	006590767	S	494	GGCCTATGACCTATGACAGCAGGATTTGGACCACAGACCCTAGTGAGCAC	7	+	149726559-149726567:149726568-149726608	7qF5	Mus musculus mitochondrial ribosomal protein L23 (Mrpl23), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]	L23mrp; Rpl23; Rpl23l	L23mrp; Rpl23; Rpl23l
Mus musculus	Riken	ILMN_205002	ILMN_205002	LBCL1	ri|9530086N01|PX00113J02|AK035683|3187					AK035683	Lbcl1		ILMN_1233424	007400300	S	3119	GTAAACCAGTCTGCCTTTATCTTGTGAGTGCTGGGACCACCACACTTGAC										
Mus musculus	MEEBO	ILMN_209721	ILMN_209721	B230215L15RIK	scl0320478.2_61	NM_177170.2			31342972	NM_177170.2	B230215L15Rik		ILMN_1246610	006590014	S	469	CTCTTGTGCAACTAAGAAAGACCTCATTTTCCATTTGCTGGATCCTCCTG										
Mus musculus	MEEBO	ILMN_209721	ILMN_209721	B230215L15RIK	scl0320478.2_61	NM_177170.2			31342972	NM_177170.2	B230215L15Rik		ILMN_2768945	004830647	S	3175	GCAGTGGACCTGTAGACAGATAGATAGGTCAAGGGGCTCCTGTACTCAGA										
Mus musculus	MEEBO	ILMN_185226	ILMN_185226	SERPINA7	scl53797.6.1_115				46849769	NM_177920	Serpina7		ILMN_2425229	001990121	S	20	GCTGGCCATGAGTTAGCTAAGTGTAGAATTTTTGACTGGGGGTACAAATG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223634	ILMN_223634	ARHGAP26	NM_175164.4	NM_175164.4		71302	87159825	NM_175164.4	Arhgap26	NP_780373.3	ILMN_1213838	001400204	S	3786	GGCCATTAAGAATCTGTAGGACGCCAAATGTTGAGGCCTGGAGGCTAGGC	18	+	39531826-39531875	18qB3	Mus musculus Rho GTPase activating protein 26 (Arhgap26), mRNA.				1810044B20Rik; mKIAA0621; AI853435; 4933432P15Rik; 2610010G17Rik	1810044B20Rik; mKIAA0621; AI853435; 4933432P15Rik; 2610010G17Rik
Mus musculus	RefSeq	ILMN_198759	ILMN_198759	LOC236914	XM_141955.1	XM_141955.1			20984730	XM_141955.1	LOC236914		ILMN_2532824	004050669	S	1178	CTGGCTTCAACTTTGGCTGGGACTTGGTAGTGTGCTATAACAACAGGCGC										
Mus musculus	Riken	ILMN_206005	ILMN_206005	B130011F05RIK	ri|B130011F05|PX00156D12|AK044910|1265					AK044910	B130011F05Rik		ILMN_1249641	007510192	S	1182	CAATTTCACAGCCTGATCTCCAAAGTGAGTTCCTGGGTTGCCAGGGCGAC										
Mus musculus	Riken	ILMN_202751	ILMN_202751	4631433D01RIK	ri|4631433D01|PX00012A02|AK019475|3692					AK019475	4631433D01Rik		ILMN_1239194	006770706	S	3319	CAGGCTTGGCAGCACGTGTCTTTACCCCTGAGCTGTATCATTGGCCCCCA										
Mus musculus	RefSeq	ILMN_209691	ILMN_209691	DDB2	NM_028119.4	NM_028119.4		107986	146141122	NM_028119.4	Ddb2	NP_082395.2	ILMN_2621160	004880091	S	1064	CTCGGCTCCTGACTACTGACCAGAACAATGAGATTCGGGTTTACTCTGCC				2qE1	Mus musculus damage specific DNA binding protein 2 (Ddb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The repair of UV-induced T-T, C-T and C-C dimers [goid 6290] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC117576; 2610043A19Rik	MGC117576; 2610043A19Rik
Mus musculus	RefSeq	ILMN_209691	ILMN_209691	DDB2	NM_028119.4	NM_028119.4		107986	146141122	NM_028119.4	Ddb2	NP_082395.2	ILMN_2655244	001980754	S	958	ACAGTGAAGATTTGGGACCTGCGCCAAATTAAAGGGAAAGACAGCTTCCT				2qE1	Mus musculus damage specific DNA binding protein 2 (Ddb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The repair of UV-induced T-T, C-T and C-C dimers [goid 6290] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC117576; 2610043A19Rik	MGC117576; 2610043A19Rik
Mus musculus	RefSeq	ILMN_209691	ILMN_209691	DDB2	NM_028119.4	NM_028119.4		107986	146141122	NM_028119.4	Ddb2	NP_082395.2	ILMN_1229502	002230594	S	800	GCAGAGTGGTGGTTACAGGAGACAATATGGGACATGTGATCCTGTTGAGC				2qE1	Mus musculus damage specific DNA binding protein 2 (Ddb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The repair of UV-induced T-T, C-T and C-C dimers [goid 6290] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC117576; 2610043A19Rik	MGC117576; 2610043A19Rik
Mus musculus	RefSeq	ILMN_220489	ILMN_220489	ATP1A2	NM_178405.3	NM_178405.3		98660	85861248	NM_178405.3	Atp1a2	NP_848492.1	ILMN_2722716	003840632	S	3155	ATCTTCATCTATGATGAAGTTCGGAAGCTCATCCTACGGCGGTACCCTGG	1	-	174206050-174206099	1qH3	Mus musculus ATPase, Na+/K+ transporting, alpha 2 polypeptide (Atp1a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IEA]; Any process that modulates the frequency, rate or extent of striated muscle contraction [goid 6942] [evidence IMP]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence IMP]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IMP]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IMP]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IMP]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IGI]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IGI]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction [goid 45822] [evidence IMP]; Any process that decreases the concentration of calcium ions in the cytodol [goid 51481] [evidence IMP]; The directed movement of neurotransmitters into neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters. It does not occur during cholinergic synaptic transmission. Instead, acetylcholine is enzymatically degraded in the synaptic cleft [goid 1504] [evidence IMP]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle contraction [goid 45988] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a inorganic cations with a valency of one from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage [goid 15077] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	Atpa-3; mKIAA0778; AW060654	Atpa-3; mKIAA0778; AW060654
Mus musculus	RefSeq	ILMN_210837	ILMN_248591	PEAR1	NM_001032414.1	NM_001032414.1		73182	74096454	NM_001032414.1	Pear1	NP_001027586.1	ILMN_2754717	002970121	S	3870	AGTTACCCGTTGAGTCCTGCTTGCCCTTCACATATTCCACAGAACACCCA	3	-	87553396-87553445	3qF1	Mus musculus platelet endothelial aggregation receptor 1 (Pear1), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Pear1; Megf12	Pear1; Megf12
Mus musculus	Riken	ILMN_202039	ILMN_202039	TIA1	ri|2310050N03|ZX00054B22|AK009914|1969					AK009914	Tia1		ILMN_1225818	002850142	S	496	TGGTCTTCAGTAACCTTAGGCCCTGCTCAGTCAGAAACGCTTCCTCAGAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42036] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IDA]		
Mus musculus	Riken	ILMN_206446	ILMN_206446	RASA2	ri|C230059J02|PX00175P23|AK082530|3962					AK082530	Rasa2		ILMN_1215582	003830431	S	3886	GGAAGGAGGGTACCAGCTCCCATAGTTGTCCTCCAACCTCCATGTGTGTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185705	ILMN_185705	A730046J19RIK	scl54569.3_223						A730046J19Rik		ILMN_2429302	002690041	S	12	CTCATATATCAACAAATCCCAGCAATTTAGCCTACTACAAACACCACCCG										
Mus musculus	RefSeq	ILMN_186704	ILMN_244668	STXBP5	NM_001081344.1	NM_001081344.1		78808	124486804	NM_001081344.1	Stxbp5	NP_001074813.1	ILMN_2437792	004260239	S	8419	CGTACGCACTGTTCATCTCCTGCATTTTCTCTTTACGTTCGCTCAGTGCA	10	-	9475710-9475759	10qA1	Mus musculus syntaxin binding protein 5 (tomosyn) (Stxbp5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IPI]; Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence IPI]	AW742610; 4930565N16Rik; 0710001E20Rik; LGL3; mKIAA1006	AW742610; 4930565N16Rik; 0710001E20Rik; LGL3; mKIAA1006
Mus musculus	RefSeq	ILMN_186704	ILMN_244668	STXBP5	NM_001081344.1	NM_001081344.1		78808	124486804	NM_001081344.1	Stxbp5	NP_001074813.1	ILMN_1227805	004850601	S	4204	GCAGAGTGGAAGAGTGAGAGAACCTGCATTGTGGTGAGGAGAATCCGTCC	10	-	9479925-9479974	10qA1	Mus musculus syntaxin binding protein 5 (tomosyn) (Stxbp5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IPI]; Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence IPI]	AW742610; 4930565N16Rik; 0710001E20Rik; LGL3; mKIAA1006	AW742610; 4930565N16Rik; 0710001E20Rik; LGL3; mKIAA1006
Mus musculus	RefSeq	ILMN_191294	ILMN_252509	VIT	NM_028813.1	NM_028813.1		74199	58037354	NM_028813.1	Vit	NP_083089.1	ILMN_2477870	001660368	S	2449	GAGTCCAGCTCTTAGGACAGGAAAGACCTGAGAGGTTATAGGAAGTTTGT	17	+	79026555-79026604	17qE3	Mus musculus vitrin (Vit), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			1700052E02Rik; 1700110E08Rik; 2810429K11Rik	1700052E02Rik; 1700110E08Rik; 2810429K11Rik
Mus musculus	RefSeq	ILMN_222231	ILMN_235448	HUS1B	NM_153072.1	NM_153072.1		210554	23346476	NM_153072.1	Hus1b	NP_694712.1	ILMN_1240847	006620291	S	532	CTGGTGGAAGCAAACCTCAATGGCAGAATGAACTTGACTGTAGAAACTGA	13	-	31038962-31039011	13qA3.2	Mus musculus Hus1 homolog b (S. pombe) (Hus1b), mRNA.					
Mus musculus	RefSeq	ILMN_254253	ILMN_254253	BC088983	NM_001009951.1	NM_001009951.1		382010	57977301	NM_001009951.1	BC088983	NP_001009951.1	ILMN_2835053	003520138	S	854	GCTGCAACACACGGGAAAGTGATGGTCGACGAGAAGGCCTGGAACAACCT	8	-	59018541-59018590	8qB2	Mus musculus cDNA sequence BC088983 (BC088983), mRNA.				4933440G23Rik; KIAA1712; mKIAA1712; MGC113766	4933440G23Rik; KIAA1712; mKIAA1712; MGC113766
Mus musculus	Riken	ILMN_207335	ILMN_207335	5930407M05RIK	ri|5930407M05|PX00646E15|AK077837|2058					AK077837	5930407M05Rik		ILMN_1235810	003870739	S	1671	GCCTGTAACCTCAGCATTGTGGGGAGTAGAGACTGGGGGACCAATGGAAC										
Mus musculus	RefSeq	ILMN_192302	ILMN_192302	UBXN6	NM_024432.2	NM_024432.2		66530	31981252	NM_024432.2	Ubxn6	NP_077752.1	ILMN_2876575	003610709	S	1461	TCCCTGAGTCCCCAGCAATAGGAAGGACAGTAGTAGCAGTAGAGTTGGAG	17	-	56207867-56207916	17qD	Mus musculus UBX domain protein 6 (Ubxn6), mRNA.				Ubxdc2; 2210415J11Rik; AU040909; 1200008L11Rik	Ubxdc2; 2210415J11Rik; AU040909; 1200008L11Rik
Mus musculus	RefSeq	ILMN_192302	ILMN_192302	UBXN6	NM_024432.2	NM_024432.2		66530	31981252	NM_024432.2	Ubxn6	NP_077752.1	ILMN_2876579	003890543	S	1225	AGAAGCTGGAGGAGAACGAGGCCCTGGCCTTGAATGAGTGTGGGCTGGTA	17	-	56208103-56208106:56208383-56208428	17qD	Mus musculus UBX domain protein 6 (Ubxn6), mRNA.				Ubxdc2; 2210415J11Rik; AU040909; 1200008L11Rik	Ubxdc2; 2210415J11Rik; AU040909; 1200008L11Rik
Mus musculus	RefSeq	ILMN_192302	ILMN_192302	UBXN6	NM_024432.2	NM_024432.2		66530	31981252	NM_024432.2	Ubxn6	NP_077752.1	ILMN_1234318	001780168	S	1505	TTGGAGACAAGGTCCTACCTCCTCTGTGGGCTGCAAGGGACAGGCTTGTC	17	-	56207823-56207872	17qD	Mus musculus UBX domain protein 6 (Ubxn6), mRNA.				Ubxdc2; 2210415J11Rik; AU040909; 1200008L11Rik	Ubxdc2; 2210415J11Rik; AU040909; 1200008L11Rik
Mus musculus	RefSeq	ILMN_212328	ILMN_212328	PTPRV	NM_007955.2	NM_007955.2		13924	34328114	NM_007955.2	Ptprv	NP_031981.2	ILMN_2625197	005420358	S	5375	CCTCTACAACTGTCTGAACAGCGCATTGAGGAACAGGCTGCCCCGAGCTA	1	-	137005209-137005258	1qE4	Mus musculus protein tyrosine phosphatase, receptor type, V (Ptprv), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IGI]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle [goid 6977] [evidence IGI]; A cell cycle checkpoint that arrests cell cycle progression G1 phase in response to DNA damage [goid 31571] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	OST; OST-PTP; Esp; mOST-PTP	OST; OST-PTP; Esp; mOST-PTP
Mus musculus	MEEBO	ILMN_224241	ILMN_224241	COG3	scl45300.23_484				31341419	NM_177381	Cog3		ILMN_2777217	003130079	S	4027	CTTACCAACTGCTGGGAGGGTGGGACTGATCCAGTTCGTTTGCTGAATGA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212283	ILMN_212283	KRTAP16-9	NM_130876.3	NM_130876.3		170657	113865952	NM_130876.3	Krtap16-9	NP_570946.2	ILMN_2979908	006180209	S	303	CACGGGACTTGGAAATACTTGTCGTCCTGTTTTTCGCTCTTATTCCAGAG	16	-	88869303-88869352	16qC3.3	Mus musculus keratin associated protein 16-9 (Krtap16-9), mRNA.					
Mus musculus	RefSeq	ILMN_186611	ILMN_212283	KRTAP16-9	NM_130876.3	NM_130876.3		170657	113865952	NM_130876.3	Krtap16-9	NP_570946.2	ILMN_2437012	005080706	S	298	GTAAACACGGGACTTGGAAATACTTGTCGTCCTGTTTTTCGCTCTTATTC	16	-	88869308-88869357	16qC3.3	Mus musculus keratin associated protein 16-9 (Krtap16-9), mRNA.					
Mus musculus	RefSeq	ILMN_214739	ILMN_219720	PHKA1	NM_173021.3	NM_173021.3		18679	153945787	NM_173021.3	Phka1	NP_766609.2	ILMN_1230564	002710025	S	3630	GCATTGGGAGCATCATTGCTGTGGAGAAAATAGTTCATATTGCCAACGAC				XqD	Mus musculus phosphorylase kinase alpha 1 (Phka1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	5330411D17; Phka; 9830108K24Rik	5330411D17; Phka; 9830108K24Rik
Mus musculus	RefSeq	ILMN_219720	ILMN_219720	PHKA1	NM_173021.3	NM_173021.3		18679	153945787	NM_173021.3	Phka1	NP_766609.2	ILMN_2712685	000520168	S	4171	CTGTAGAGCTGTTAGTGGCTTAGTTTTTAAACTCCTATTGGGGAGTAGGT				XqD	Mus musculus phosphorylase kinase alpha 1 (Phka1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	5330411D17; Phka; 9830108K24Rik	5330411D17; Phka; 9830108K24Rik
Mus musculus	RefSeq	ILMN_196798	ILMN_196798	LOC242584	XM_143950.1	XM_143950.1			20842227	XM_143950.1	LOC242584		ILMN_1253835	001050601	S	2269	CGAGGAGATGAGGTGTGTGGTAATGTGGAATTTCAAGAGTTGCTGCGTGG										
Mus musculus	RefSeq	ILMN_218261	ILMN_218261	CCDC125	NM_183115.3	NM_183115.3		76041	62530189	NM_183115.3	Ccdc125	NP_898938.2	ILMN_2693679	004540739	S	1565	GCCCTTGCACATCAGAGAAAGGTTAGTTACATGCTCGCTCGGGCGCTGGA	13	+	101466084-101466133	13qD1	Mus musculus coiled-coil domain containing 125 (Ccdc125), mRNA.				AL023012; 5830436D01Rik	AL023012; 5830436D01Rik
Mus musculus	RefSeq	ILMN_219817	ILMN_219817	LYZL4	NM_026915.2	NM_026915.2		69032	31982636	NM_026915.2	Lyzl4	NP_081191.1	ILMN_1232761	002340255	S	843	GCCTCGTCTTGGGACTGAGGATGCTCTCCTGTTTGCTGCTTCAATCCACC	9	-	121487064-121487113	9qF4	Mus musculus lysozyme-like 4 (Lyzl4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]	1810009N24Rik; Lyc4; AI504271	1810009N24Rik; Lyc4; AI504271
Mus musculus	MEEBO	ILMN_185913	ILMN_185913	AU042671	scl0231709.3_322				51711363	XM_132325	AU042671		ILMN_2431066	004640136	S	10	GAAATCTTAAGTCCAGACTTCCGCTCTCCCTCAGTGTATCTACCTGTCTG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185913	ILMN_185913	AU042671	scl0231709.3_322				51711363	XM_132325	AU042671		ILMN_1255549	004120632	S	17	TAAGTCCAGACTTCCGCTCTCCCTCAGTGTATCTACCTGTCTGGTATGGG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186716	ILMN_234126	SLC5A5	NM_053248.1	NM_053248.1		114479	17298677	NM_053248.1	Slc5a5	NP_444478.1	ILMN_1250582	005310692	S	2063	GAGGGTTGGTTCTCTATCCACCAAGGAAAACATCTGGAACCGCAGTGACC	8	-	73407570-73407619	8qB3.3	Mus musculus solute carrier family 5 (sodium iodide symporter), member 5 (Slc5a5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: iodide(out) + Na+(out) = iodide(in) + Na+(in) [goid 8507] [evidence IDA]	NIS	NIS
Mus musculus	MEEBO	ILMN_211066	ILMN_211066	9030221M09RIK	scl0320951.1_277	NM_177298.2			31343279	NM_177298.2	9030221M09Rik		ILMN_2718350	002340095	S	216	TTGGCAACAGGTGGAGGGTATGCCGGGTACCGGCAGTATGAGAAGTACAG										
Mus musculus	MEEBO	ILMN_211066	ILMN_211066	9030221M09RIK	scl0320951.1_277	NM_177298.2			31343279	NM_177298.2	9030221M09Rik		ILMN_2718349	001240435	S	215	GTTGGCAACAGGTGGAGGGTATGCCGGGTACCGGCAGTATGAGAAGTACA										
Mus musculus	RefSeq	ILMN_218628	ILMN_218628	GOSR1	NM_016810.3	NM_016810.3		53334	118131190	NM_016810.3	Gosr1	NP_058090.2	ILMN_2698248	003850138	S	3691	GTGGCAGATGCGGCAGAGGAAACAAACCTACCCAAATGACGGATTGTGCA	11	-	76540628-76540677	11qB5	Mus musculus golgi SNAP receptor complex member 1 (Gosr1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	GOSRI; GOS-28; AI414660; BB145494; GS28; AI426320	GOSRI; GOS-28; AI414660; BB145494; GS28; AI426320
Mus musculus	MEEBO	ILMN_218884	ILMN_218884	4833425H18RIK	scl0067571.1_330	NM_026245.1			21312903	NM_026245.1	4833425H18Rik		ILMN_2701455	006370689	S	1435	TACATGCTACAAATTTCCAACTCTTTGAGAATAAAGAATGCGTTATATAC										
Mus musculus	RefSeq	ILMN_210164	ILMN_257207	KLRA10	NM_008459.2	NM_008459.2		16628	9506838	NM_008459.2	Klra10	NP_032485.2	ILMN_2642723	003450059	S	405	TTTAGATTCCTCACGGGACACAGGCGGAGGTGTTAAATACTGGTTCTGCT	6	-	130225879-130225906:130229287-130229308	6qF3	Mus musculus killer cell lectin-like receptor subfamily A, member 10 (Klra10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ly49J; Ly49i2	Ly49J; Ly49i2
Mus musculus	MEEBO	ILMN_214093	ILMN_214093	9330129D05RIK	scl26090.11.1_214	NM_178799.2			31342086	NM_178799.2	9330129D05Rik		ILMN_2644161	006350195	S	2105	CCACTGTGTGACCACTGATGTGCCCACGTCACAGAATACTGATTCAGATG										
Mus musculus	RefSeq	ILMN_196701	ILMN_196701	LOC236035	XM_125295.2	XM_125295.2			38096447	XM_125295.2	LOC236035		ILMN_2525478	006550484	S	156	TGCCGGCGGCTTCAAGTCTGAGACCATCGTTGAACAGGTAAACAGGTGAG										
Mus musculus	MEEBO	ILMN_189344	ILMN_189344	MJ-3000-107_2517	MJ-3000-107_2517						MJ-3000-107_2517		ILMN_1245866	000450201	S	5	CCTCCTTAGCTATTATCCCAAACACCAAAGCAGAGCAAGCCCTCCAATCC										
Mus musculus	RefSeq	ILMN_209329	ILMN_209329	THA1	NM_027919.3	NM_027919.3		71776	146141098	NM_027919.3	Tha1	NP_082195.1	ILMN_2594768	006400754	S	2620	AAATAGATCCTTAGTGACTGACACAGTGGAGTTGTCAGAGGTGGACTGTG				11qE2	Mus musculus threonine aldolase 1 (Tha1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GLY1; 1300017K07Rik	GLY1; 1300017K07Rik
Mus musculus	RefSeq	ILMN_214034	ILMN_214034	IL10RA	NM_008348.2	NM_008348.2		16154	110624777	NM_008348.2	Il10ra	NP_032374.1	ILMN_1219946	003990474	S	3119	GTCATGACCCTAATCTGGTACGAGAGCTCCTTCTGGAACTGGGCAAGCTC	9	-	45062246-45062295	9qA5.2	Mus musculus interleukin 10 receptor, alpha (Il10ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AW553859; Il10r; CDw210; mIL-10R	AW553859; Il10r; CDw210; mIL-10R
Mus musculus	RefSeq	ILMN_222444	ILMN_255359	LOC671523	XM_987550.1	XM_987550.1		671523	94382853	XM_987550.1	LOC671523	XP_992644.1	ILMN_1242577	001710280	S	4107	CTAAATACCAAGCCTTGCCGTGGCAATTTGCATTTCCACAATGAATTTGG					PREDICTED: Mus musculus similar to ring finger and WD repeat domain 3 (LOC671523), mRNA.					
Mus musculus	RefSeq	ILMN_221716	ILMN_221716	AI182371	NM_178885.3	NM_178885.3		98870	142369448	NM_178885.3	AI182371	NP_849216.1	ILMN_2739421	002230053	S	1459	TGACACATTTCTGATTTTACTCTTGATTATTTTTTAATTAGTTCTTTTAT	2	-	34939756-34939805	2qB	Mus musculus expressed sequence AI182371 (AI182371), mRNA.				AI046667	AI046667
Mus musculus	RefSeq	ILMN_219271	ILMN_219271	CDH26	NM_198656.1	NM_198656.1		381409	38348545	NM_198656.1	Cdh26	NP_941058.1	ILMN_2707976	005700753	S	2536	TTATTCTTAGTCACTTCCTAGTCTGCGGTGGTTTGTGTTACAGTCACTTG	2	+	178221716-178221765	2qH4	Mus musculus cadherin-like 26 (Cdh26), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC56946; Gm1010	MGC56946; Gm1010
Mus musculus	RefSeq	ILMN_219271	ILMN_219271	CDH26	NM_198656.1	NM_198656.1		381409	38348545	NM_198656.1	Cdh26	NP_941058.1	ILMN_2706531	007100767	S	2082	GCCACCAGACACTGATTGTGTATAACGAGGAAAGCAAAGTCCCTTCAGCC	2	+	178207105-178207154	2qH4	Mus musculus cadherin-like 26 (Cdh26), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC56946; Gm1010	MGC56946; Gm1010
Mus musculus	RefSeq	ILMN_189915	ILMN_246636	GPR83	NM_010287.2	NM_010287.2		14608	142361503	NM_010287.2	Gpr83	NP_034417.1	ILMN_2707941	007040195	S	1935	CAGCTTCAGTGACCTTGGCTCTATCCATGACCAGACAGGACCCATTTTGG	9	+	14673626-14673675	9qA2	Mus musculus G protein-coupled receptor 83 (Gpr83), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]	Gir; Gpr72; AW045253; RP82; RP39; RP105	Gir; Gpr72; AW045253; RP82; RP39; RP105
Mus musculus	RefSeq	ILMN_198620	ILMN_233556	BRWD3	NM_001081477.1	NM_001081477.1		382236	125490357	NM_001081477.1	Brwd3	NP_001074946.1	ILMN_1220624	000240014	S	5714	GTGTGGGGACTTCTGCTTCCTTTCACATTGGTGCTTTTCCATTATGCCAG	X	-	105938217-105938266	XqD	Mus musculus bromodomain and WD repeat domain containing 3 (Brwd3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm596; Brodl; D030064D06Rik	Gm596; Brodl; D030064D06Rik
Mus musculus	RefSeq	ILMN_233556	ILMN_233556	BRWD3	NM_001081477.1	NM_001081477.1		382236	125490357	NM_001081477.1	Brwd3	NP_001074946.1	ILMN_3037942	004180343	I	4882	TGATGGACCTCTTACAAATGTTGATGGCAGAGAGCCCCGGACAGGAGCCA	X	-	105939049-105939098	XqD	Mus musculus bromodomain and WD repeat domain containing 3 (Brwd3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm596; Brodl; D030064D06Rik	Gm596; Brodl; D030064D06Rik
Mus musculus	RefSeq	ILMN_200843	ILMN_233556	BRWD3	NM_001081477.1	NM_001081477.1		382236	125490357	NM_001081477.1	Brwd3	NP_001074946.1	ILMN_1247774	007150154	S	4055	GATGGTCCTGGCACTTCATCTGGAAGGAGGGCTAAATGTCGAGGCAGACG	X	-	105950875-105950895:105951685-105951713	XqD	Mus musculus bromodomain and WD repeat domain containing 3 (Brwd3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm596; Brodl; D030064D06Rik	Gm596; Brodl; D030064D06Rik
Mus musculus	RefSeq	ILMN_233556	ILMN_233556	BRWD3	NM_001081477.1	NM_001081477.1		382236	125490357	NM_001081477.1	Brwd3	NP_001074946.1	ILMN_3112122	007320543	A	585	CTGCTTTTGCAGCCCTCCACAGAGGCAGACCCCCAGAACTACCTGTAAAT	X	-	106020166-106020215	XqD	Mus musculus bromodomain and WD repeat domain containing 3 (Brwd3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm596; Brodl; D030064D06Rik	Gm596; Brodl; D030064D06Rik
Mus musculus	RefSeq	ILMN_187450	ILMN_248805	STK32A	NM_178749.3	NM_178749.3		269019	142379975	NM_178749.3	Stk32a	NP_848864.1	ILMN_1260072	002260039	S	3652	CCCAGTGGGCATCTTTCTGAGCACGGTTGCTTTCAGAACTGGGGATATGC	18	+	43477022-43477071	18qB3	Mus musculus serine/threonine kinase 32A (Stk32a), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	A930015B13Rik; YANK1	A930015B13Rik; YANK1
Mus musculus	RefSeq	ILMN_213518	ILMN_213518	IGFALS	NM_008340.3	NM_008340.3		16005	142388344	NM_008340.3	Igfals	NP_032366.2	ILMN_1222609	006220128	S	1926	GCTGGCTCTGGAATACTTACCCATCTCAAGGGGATAGGTCATGGCTGCTC	17	+	25016917-25016966	17qA3.3	Mus musculus insulin-like growth factor binding protein, acid labile subunit (Igfals), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC150140; Albs; MGC150141; mKIAA4111; ALS; KIAA4111	MGC150140; Albs; MGC150141; mKIAA4111; ALS; KIAA4111
Mus musculus	RefSeq	ILMN_199711	ILMN_241992	EG545056	NR_002889.2	NR_002889.2		545056	142351255	NR_002889.2	EG545056		ILMN_1230056	004860411	S	707	CCCAGAATCTTCCTTTGCCAGACGTGGTTCCTGATGGGGAGCTGCACGGT	14	-	56629561-56629610	14qC3	Mus musculus predicted gene, EG545056 (EG545056), non-coding RNA.					
Mus musculus	RefSeq	ILMN_192121	ILMN_220675	PITRM1	NM_145131.1	NM_145131.1		69617	21699067	NM_145131.1	Pitrm1	NP_660113.1	ILMN_1241571	006520170	S	3254	GGCTAACTGATTTTCCGAACAAAGAAACTAGTAACTCTTGTGATCATCCG	13	+	6579115-6579164	13qA1	Mus musculus pitrilysin metallepetidase 1 (Pitrm1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AA410010; 2310012C15Rik; mKIAA1104; MP1; Ntup1	AA410010; 2310012C15Rik; mKIAA1104; MP1; Ntup1
Mus musculus	RefSeq	ILMN_220675	ILMN_220675	PITRM1	NM_145131.1	NM_145131.1		69617	21699067	NM_145131.1	Pitrm1	NP_660113.1	ILMN_2780167	004900093	S	3047	CGGGAAGAGCACACACGGCCTGGCTATCCTCGGACCAGAGAACTCAAAAA	13	+	6578908-6578957	13qA1	Mus musculus pitrilysin metallepetidase 1 (Pitrm1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AA410010; 2310012C15Rik; mKIAA1104; MP1; Ntup1	AA410010; 2310012C15Rik; mKIAA1104; MP1; Ntup1
Mus musculus	RefSeq	ILMN_192121	ILMN_220675	PITRM1	NM_145131.1	NM_145131.1		69617	21699067	NM_145131.1	Pitrm1	NP_660113.1	ILMN_2612858	001740091	S	3390	CTAGGCTTAGTAATGTTTCAGAGGCTTAATTTGCTCACTGCTGTCATTTA	13	+	6579251-6579300	13qA1	Mus musculus pitrilysin metallepetidase 1 (Pitrm1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AA410010; 2310012C15Rik; mKIAA1104; MP1; Ntup1	AA410010; 2310012C15Rik; mKIAA1104; MP1; Ntup1
Mus musculus	MEEBO	ILMN_214025	ILMN_214025	6230403H02RIK	scl067779.1_6				51828958	XM_356578	6230403H02Rik		ILMN_1251337	006110113	S	4288	CCCAGTGAACTCTATTGAATGTCTAATACACAAGGTATTCCAGCTACTGG										
Mus musculus	RefSeq	ILMN_215109	ILMN_215109	CRCP	NM_007761.2	NM_007761.2		12909	118131170	NM_007761.2	Crcp	NP_031787.1	ILMN_2655595	005700358	S	1174	TGGCCCTCTTGTTGCCAGAGTACCCAGGTAGCATAGGCTAGCATATTACA	5	+	130536357-130536406	5qG1.3	Mus musculus calcitonin gene-related peptide-receptor component protein (Crcp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IDA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA];  [goid 1635] [evidence IDA]	AL022669	AL022669
Mus musculus	RefSeq	ILMN_196928	ILMN_196928	LOC329188	XM_287006.1	XM_287006.1			28479397	XM_287006.1	LOC329188		ILMN_1259585	003710577	S	227	CGAGACGCAACAAGCCTTGGCAGGAATATGTGACCAGAAGCCAGCTATGT										
Mus musculus	RefSeq	ILMN_209654	ILMN_209654	SNX18	NM_130796.3	NM_130796.3		170625	145301615	NM_130796.3	Snx18	NP_570614.2	ILMN_2597886	004810487	S	4177	CACCGGCTCGTGGGACTTGACGTGAATTCTGTGGGTTAATGCACCAGGCT				13qD2.2	Mus musculus sorting nexin 18 (Snx18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_248109	ILMN_248109	PCDHA2	NM_198117.1	NM_198117.1		353234	51092276	NM_198117.1	Pcdha2	NP_932785.1	ILMN_2991299	002100437	S	565	AGCCAATCTCTGTTTCTTGTGCTGGGAAAATCTCTGGACAGAGAGGAGGA	18	+	37099536-37099585	18qB2-qB3	Mus musculus protocadherin alpha 2 (Pcdha2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188188	ILMN_254936	JRKL	XM_910652.3	XM_910652.3		77532	149259472	XM_910652.3	Jrkl	XP_915745.1	ILMN_2450522	002710221	S	2678	GCTAGATATAATAATTGTTAATTTTTTGACACAAAAAGGAATTCTGTAAT					PREDICTED: Mus musculus jerky homolog-like (mouse) (Jrkl), mRNA.					
Mus musculus	RefSeq	ILMN_188188	ILMN_254936	JRKL	XM_910652.3	XM_910652.3		77532	149259472	XM_910652.3	Jrkl	XP_915745.1	ILMN_1255837	001410487	S	1519	CATCAGAAGAGCCCAAGGCCAGACAGATGAATCCAGTGAAAATGATGAGG					PREDICTED: Mus musculus jerky homolog-like (mouse) (Jrkl), mRNA.					
Mus musculus	RefSeq	ILMN_191340	ILMN_253264	GPR39	XM_913690.2	XM_913690.2		71111	94363930	XM_913690.2	Gpr39	XP_918783.2	ILMN_2717793	003360243	S	414	TCATCCCTTCAAGTATAAAGCAGTGTCTGGACCTCGCCAGGTGAAACTGC	1	+	127505296-127505345		PREDICTED: Mus musculus G protein-coupled receptor 39 (Gpr39), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	MEEBO	ILMN_211836	ILMN_211836	HOXA11S	scl30040.7.394_25	XM_149724.5			38084199	XM_149724.5	Hoxa11s		ILMN_2619975	007510037	S	764	CCTCGTTTTCCCGAACTTCAAGGTCTAGGCAGACCCCCTTAGGGCCTTGC										
Mus musculus	RefSeq	ILMN_198397	ILMN_198397	LOC381210	XM_355143.1	XM_355143.1			38084844	XM_355143.1	LOC381210		ILMN_1250252	002450242	S	248	CAGAGGGTAGAATTGAAAGCTGTGGGTTGCTCTCGCAAGCTCAGTCCTGC										
Mus musculus	RefSeq	ILMN_191617	ILMN_254339	AAK1	NM_001040106.2	NM_001040106.2		269774	145046263	NM_001040106.2	Aak1	NP_001035195.1	ILMN_2480669	001500575	S	7716	ACTATGCTGCAGTGTCCTGAATTCACTATCTGTGGGTATTCTCCTCTGCC	6	+	86941592-86941641	6qD1	Mus musculus AP2 associated kinase 1 (Aak1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA1048; AU067724; R75501; 5530400K14Rik; 9630042K20; C79663; MGC40785; AU067726; BC028270; D6Ertd245e	mKIAA1048; AU067724; R75501; 5530400K14Rik; 9630042K20; C79663; MGC40785; AU067726; BC028270; D6Ertd245e
Mus musculus	Riken	ILMN_203501	ILMN_203501	MGEA5	ri|C430018G24|PX00078P10|AK049510|2813					AK049510	Mgea5		ILMN_2557787	002570050	S	1406	TGTGCGCCAGCACGCGGGCCCGTGAGACTTGTTCTTTTCTCTGCTGTGAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190312	ILMN_190312	4632427E13RIK	scl068186.1_150						4632427E13Rik		ILMN_1240009	004920161	S	6	ACCCCACCAGCGAACGTAAACGACATTGAAAAGGGACTGCAAGTGAGCAG										
Mus musculus	RefSeq	ILMN_212537	ILMN_212537	FBXO2	NM_176848.1	NM_176848.1		230904	33859800	NM_176848.1	Fbxo2	NP_789818.1	ILMN_2822825	002510008	S	1162	CTGGATCCCGCGCTCCTAGCATTGTGCCTGCCTCAAAGTGGGCACTCAAT	4	+	147540454-147540503	4qE2	Mus musculus F-box protein 2 (Fbxo2), mRNA.	Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; Any process that modulates the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31396] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IDA]	Interacting selectively with any carbohydrate [goid 30246] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IDA]	MGC54895; Fbs1; FBG1; Fbs2; FBX2; NFB42	MGC54895; Fbs1; FBG1; Fbs2; FBX2; NFB42
Mus musculus	RefSeq	ILMN_219285	ILMN_219285	BC057552	NM_172502.2	NM_172502.2		212123	124249332	NM_172502.2	BC057552	NP_766090.2	ILMN_2896042	005260196	S	2257	GGGGAGCCCCGTGGTGGCCTCGCCTTGTTCCATGTACTAAATGCTTTATT				8qC3	Mus musculus cDNA sequence BC057552 (BC057552), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		MGC66593; 6720484B16	MGC66593; 6720484B16
Mus musculus	MEEBO	ILMN_213029	ILMN_213029	OLFR572	scl32272.1.1_268				22128786	NM_147089	Olfr572		ILMN_2771359	002260538	S	834	GGCAAATGCTTATCTTCTTGTCCCCCCTGTGCTAAACCCCATAGTTTATA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_222986	ILMN_222986	SYPL	NM_198710.2	NM_198710.2		19027	118130909	NM_198710.2	Sypl	NP_942003.1	ILMN_1254669	001400377	S	1863	CCTAGTCCTACAAGATGATGTTTGTGTGTAAGGCACACCTTTTTTGTTGC	12	+	33661658-33661707	12qA3	Mus musculus synaptophysin-like protein (Sypl), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	AI314763; Pphn; Pan I; AI604763; D12Ertd446e	AI314763; Pphn; Pan I; AI604763; D12Ertd446e
Mus musculus	MEEBO	ILMN_191245	ILMN_191245	1110065P20RIK	scl0068920.1_278				51709451	XM_149496	1110065P20Rik		ILMN_2477432	005700619	S	9	GGGGTTGGAGGTTTCTTCCTTTGGAAGTACTGAACCTGTAACGTTTTCAT										
Mus musculus	RefSeq	ILMN_195990	ILMN_313193	IQSEC1	XM_001480423.1	XM_001480423.1		232227	149255368	XM_001480423.1	Iqsec1	XP_001480473.1	ILMN_2520600	004610377	S	2981	CTATGCCAGTGGCGAGGGCCTCAAGCGCAGCGCCCTCAGCAGCTCACTGA	6	-	90617911-90617960	6qD1	PREDICTED: Mus musculus IQ motif and Sec7 domain 1 (Iqsec1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223239	ILMN_223239	CENPQ	NM_031863.3	NM_031863.3		83815	146149160	NM_031863.3	Cenpq	NP_114069.1	ILMN_2761273	006480292	S	998	CTTGACTCCTAAAGAGTTGGATTTTGTTTTGGTGTTTAAGCCGTGTTCCA				17qB2	Mus musculus centromere protein Q (Cenpq), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]			2610528M18Rik	2610528M18Rik
Mus musculus	Riken	ILMN_205036	ILMN_205036	A630004L17RIK	ri|A630004L17|PX00143D10|AK041354|2876					AK041354	A630004L17Rik		ILMN_2569511	001340739	S	2539	CCGCTGTATCTAGCTTGCAAAGACTTTGGAACAATGTCTGCTTCCTCTGC										
Mus musculus	RefSeq	ILMN_197501	ILMN_197501	LOC380906	XM_354819.1	XM_354819.1			38076320	XM_354819.1	LOC380906		ILMN_1240136	006760674	S	183	CCCTACAGTGAGATACCACACCAAGCTGACAGGACCCGTGATGCCCATCC										
Mus musculus	MEEBO	ILMN_219639	ILMN_219639	4930403O06RIK	scl068944.7_1	NM_026881.1			23956187	NM_026881.1	4930403O06Rik		ILMN_2711651	001690403	S	812	CACTGCTTAACTAATGGGATAGTGCTATGGTCACGGATGGCTTCTTTAGT										
Mus musculus	Riken	ILMN_202239	ILMN_202239	4930404F20RIK	ri|4930404F20|PX00029M13|AK015077|1315					AK015077	4930404F20Rik		ILMN_1222969	004760341	S	1131	AGCTTGGCGCCCGACGCTTTTACCTACTAAGCCATCTTGCTGGACCAGGA										
Mus musculus	MEEBO	ILMN_212929	ILMN_212929	9030624G23RIK	scl0066808.1_217				51766836	XM_484126	9030624G23Rik		ILMN_2727829	002710092	S	1072	CCTCTGCCCAATTGCTACCTGGTGTACTAAAGGACTGTATGTCTTTGCAG										
Mus musculus	MEEBO	ILMN_217388	ILMN_217388	LGALS7	scl0016858.2_308	NM_008496.3			31543119	NM_008496.3	Lgals7		ILMN_2703181	005340543	S	480	AGCTGCATTCAGTGAAGATCTTCTAAGCAAGGACCCAAGGGCGTGGCGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	Riken	ILMN_203416	ILMN_203416	A930041K15RIK	ri|A930041K15|PX00068G15|AK044774|2603					AK044774	A930041K15Rik		ILMN_2557137	002970546	S	280	GGTGATGTCACAGATGACCCTGAACTCTTGATCTGCTACCTTCTCCCAGG										
Mus musculus	RefSeq	ILMN_198451	ILMN_198451	LOC240672	XM_140740.3	XM_140740.3			38085196	XM_140740.3	LOC240672		ILMN_2531737	004040382	S	2337	TCTGAGGAGGTGGCAGTAGCTGCCTGGGTCCTGGGTCGTGACTGACACTT										
Mus musculus	MEEBO	ILMN_192558	ILMN_192558	ZFP353	scl00234203.2_34	NM_153096.1			23346522	NM_153096.1	Zfp353		ILMN_2522195	001940333	S	20	TATCAATGGACTCAATTCCTCAATAAAAAAACATGTACTAACAGACTGGC										
Mus musculus	MEEBO	ILMN_192558	ILMN_192558	ZFP353	scl00234203.2_34	NM_153096.1			23346522	NM_153096.1	Zfp353		ILMN_1232463	005130491	S	11	ACAAATATTTAGAATAAGAAACTTTACCATGTGATCTCAGACCCCTTATT										
Mus musculus	Riken	ILMN_205954	ILMN_205954	CSMD1	ri|C230015P12|PX00173P15|AK048713|2914					AK048713	Csmd1		ILMN_1259099	002680601	S	2242	CCTATCAACCCCAGTGCAGTCCCACAGCATCCACACCAAGGCAAATGCGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218335	ILMN_218335	SLFN4	NM_011410.2	NM_011410.2		20558	84490390	NM_011410.2	Slfn4	NP_035540.2	ILMN_1222206	003520706	S	3410	TTTATGTTCGTATCATCATGTTGTTTGTGCTGTAGATAATACCTTTACAG	11	+	83003170-83003219	11qC	Mus musculus schlafen 4 (Slfn4), mRNA.				AI450778	AI450778
Mus musculus	RefSeq	ILMN_221784	ILMN_221784	SLC31A1	NM_175090.3	NM_175090.3		20529	142388333	NM_175090.3	Slc31a1	NP_780299.1	ILMN_1254437	004590739	S	3466	GGCACAGTGTCCATCATGCCATTTAATCTTGTGCCTGCCCTTTCCAGCCT	4	+	62052573-62052622	4qB3	Mus musculus solute carrier family 31, member 1 (Slc31a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]	AI787263; 4930445G01Rik; AU016967; Ctr1	AI787263; 4930445G01Rik; AU016967; Ctr1
Mus musculus	MEEBO	ILMN_195141	ILMN_195141	1010001D01RIK	scl16374.9.1_0				18875325	NM_133186	1010001D01Rik		ILMN_2512949	006590519	S	12	CCTACTACGCATCTTGTCTAGCCCTCTGTATTCCTTTTATACAAATCTTT										
Mus musculus	RefSeq	ILMN_219959	ILMN_219959	CDCP2	NM_172873.3	NM_172873.3		242603	141802087	NM_172873.3	Cdcp2	NP_766461.1	ILMN_1251133	001940471	S	2294	TACTAAGGTGTCCTCACCCAGCAGCGTGCTAGCCAGGCAACCCCTGTATG	4	+	106780036-106780085	4qC7	Mus musculus CUB domain containing protein 2 (Cdcp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			RP23-423N6.1; D030010E02Rik	RP23-423N6.1; D030010E02Rik
Mus musculus	RefSeq	ILMN_197012	ILMN_226516	1190005F20RIK	NM_026876.2	NM_026876.2		98685	142363477	NM_026876.2	1190005F20Rik	NP_081152.1	ILMN_1225861	006620037	S	687	GAATGTGCATCTGTCACTTAGCCTGCCGCCCGGTGAAGCCAACCATCGTT	1	+	153286652-153286701	1qG2	Mus musculus RIKEN cDNA 1190005F20 gene (1190005F20Rik), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N2-methylguanine [goid 4809] [evidence IEA]	C1orf25; AW226554; Trm1-like; MGC70241	C1orf25; AW226554; Trm1-like; MGC70241
Mus musculus	RefSeq	ILMN_222342	ILMN_222342	PRRT1	NM_030890.1	NM_030890.1		260297	13562101	NM_030890.1	Prrt1	NP_112152.1	ILMN_2977166	005310736	S	799	GAAGCCCGGAATTTCTCCTTCATCTCCCTGGCCGTGGGCATCGCAGCCAT	17	+	34767815-34767864	17qB1	Mus musculus proline-rich transmembrane protein 1 (Prrt1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			ORF31; NG5; Bat-4; G5b; D17H6S54E; Bat4	ORF31; NG5; Bat-4; G5b; D17H6S54E; Bat4
Mus musculus	RefSeq	ILMN_222342	ILMN_222342	PRRT1	NM_030890.1	NM_030890.1		260297	13562101	NM_030890.1	Prrt1	NP_112152.1	ILMN_2751486	004180563	S	773	TGGTGTCTGCCGAGATCGCTTCACGCGAAGCCCGGAATTTCTCCTTCATC	17	+	34767789-34767838	17qB1	Mus musculus proline-rich transmembrane protein 1 (Prrt1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			ORF31; NG5; Bat-4; G5b; D17H6S54E; Bat4	ORF31; NG5; Bat-4; G5b; D17H6S54E; Bat4
Mus musculus	RefSeq	ILMN_222342	ILMN_222342	PRRT1	NM_030890.1	NM_030890.1		260297	13562101	NM_030890.1	Prrt1	NP_112152.1	ILMN_2977167	005810543	S	739	GTGCAGGTGCGCACGGCTTTGGCCCGCGGAGATTTGGTGTCTGCCGAGAT	17	+	34767755-34767804	17qB1	Mus musculus proline-rich transmembrane protein 1 (Prrt1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			ORF31; NG5; Bat-4; G5b; D17H6S54E; Bat4	ORF31; NG5; Bat-4; G5b; D17H6S54E; Bat4
Mus musculus	RefSeq	ILMN_221944	ILMN_221944	2410042D21RIK	NM_024254.3	NM_024254.3		72425	133893139	NM_024254.3	2410042D21Rik	NP_077216.1	ILMN_1255301	006560468	S	458	GGCTTGTGCAGGCCATCTACCTGAAAATTTACGCCACGACAGTCGGACAT	2	+	112246384-112246433	2qE3	Mus musculus RIKEN cDNA 2410042D21 gene (2410042D21Rik), mRNA.				AA166487; RP23-208E23.2; AI467442; AA473307	AA166487; RP23-208E23.2; AI467442; AA473307
Mus musculus	RefSeq	ILMN_198306	ILMN_198306	LOC232633	XM_145125.2	XM_145125.2			38083751	XM_145125.2	LOC232633		ILMN_1223144	001470682	S	660	AGGGAGGAGCCCGGAGGGCACTAAGGGTGCTGTAGGCACCGAGTGCTTTT										
Mus musculus	Riken	ILMN_205286	ILMN_205286	NDR3	ri|4833415O14|PX00313F15|AK029378|2312					AK029378	Ndr3		ILMN_2571414	006180386	S	1964	GTAAGCCTTGTAACCCGAGGTCAGTCCCTGGAACCTGCATAAGATACAGG										
Mus musculus	RefSeq	ILMN_197705	ILMN_311072	D330050I23RIK	XR_035220.1	XR_035220.1		399603	149266884	XR_035220.1	D330050I23Rik		ILMN_2529075	006100377	S	1224	CTACCGTTTGCAGATTCAGCTCTCGGCTCAGCGCAGCCACACTCTCGAGT				15qD1	PREDICTED: Mus musculus RIKEN cDNA D330050I23 gene (D330050I23Rik), misc RNA.					
Mus musculus	MEEBO	ILMN_193357	ILMN_193357	KIF13B	scl46178.2_476				51768499	XM_283218	Kif13b		ILMN_1247462	006550400	S	1712	CCCATCCAGCTGCACCATGGGGACAGGATACTGTGGGGAAACAACCATTT						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_193357	ILMN_193357	KIF13B	scl46178.2_476				51768499	XM_283218	Kif13b		ILMN_1238739	001510709	S	1	GTGTCTAGCCTGTGCTTCTAGTCCCAGACACTGCCCAAAACATCTTAGTC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	Riken	ILMN_206215	ILMN_206215	C130073D23RIK	ri|C130073D23|PX00171K22|AK081742|2472					AK081742	C130073D23Rik		ILMN_1245769	003830367	S	1837	CACAGTGGGCAGGCACAGGGTATGGCAACTCCCCAGAAAAGAACCTTGAC										
Mus musculus	RefSeq	ILMN_220640	ILMN_220640	BC051070	NM_178412.2	NM_178412.2		229688	31341514	NM_178412.2	BC051070	NP_848499.1	ILMN_1231143	002480082	S	1546	GCAGCCAACTTTGCAGACCTAGACAAGGACATAATCTGCTACATTTCTCC	3	-	106190374-106190423	3qF2.3	Mus musculus cDNA sequence BC051070 (BC051070), mRNA.				MGC58999	MGC58999
Mus musculus	RefSeq	ILMN_215328	ILMN_215328	ARMC7	NM_177778.4	NM_177778.4		276905	118130499	NM_177778.4	Armc7	NP_808446.1	ILMN_1234427	006420632	S	1995	AGCGAAGAGCAGTCCTGACAGGAAGTGGAGTTTAGGGAAAATGGGGGCCC	11	+	115351526-115351575	11qE2	Mus musculus armadillo repeat containing 7 (Armc7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP23-392H19.6; MGC27721; A630084C13; BC023126	RP23-392H19.6; MGC27721; A630084C13; BC023126
Mus musculus	RefSeq	ILMN_211252	ILMN_211252	RAB2B	NM_172601.2	NM_172601.2		76338	142369412	NM_172601.2	Rab2b	NP_766189.1	ILMN_1231955	000630711	S	2603	CACAGCACTGAGGTCTCACCAAATTTTCTAATTTTTATTGTTAATGACCG	14	-	52881471-52881520	14qC2	Mus musculus RAB2B, member RAS oncogene family (Rab2b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	A230002G14; 1500012D09Rik; 4930528G15Rik; D530043M21Rik	A230002G14; 1500012D09Rik; 4930528G15Rik; D530043M21Rik
Mus musculus	MEEBO	ILMN_213712	ILMN_213712	GABRG2	scl0001338.1_15	NM_177408.2			31341632	NM_177408.2	Gabrg2		ILMN_2713003	007570332	S	2486	TGGTTAATGAATAAAGGAAATGCTCGATTTTAATGTCCCAAATATTGACC						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213712	ILMN_213712	GABRG2	scl0001338.1_15	NM_177408.2			31341632	NM_177408.2	Gabrg2		ILMN_2639966	001070040	S	1185	TTTCATGAGGACAGGTCGTTGGGTTTGATGTGGTTAGCTCAACTCTACAC						A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IDA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]	Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223747	ILMN_223747	PGF	NM_008827.2	NM_008827.2		18654	31982831	NM_008827.2	Pgf	NP_032853.1	ILMN_2768533	001050187	S	1124	GAACTGGAGAAGAGAAGAGGAGGCCTAGAACCTGCCCTGATTCCCAGCTC	12	-	86507986-86508035	12qD2	Mus musculus placental growth factor (Pgf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Plgf; AI854365	Plgf; AI854365
Mus musculus	RefSeq	ILMN_217926	ILMN_311689	LOC100047930	XM_001479166.1	XM_001479166.1		100047930	149263147	XM_001479166.1	LOC100047930	XP_001479216.1	ILMN_2689425	006450487	S	445	GAGACAAGCCCTGCAGACTCGTCGCAGCTGGCTTCGCTCAGGCGGGAGTC					PREDICTED: Mus musculus similar to NK2 transcription factor related, locus 9 (LOC100047930), mRNA.					
Mus musculus	RefSeq	ILMN_195130	ILMN_195130	UQCRH	NM_025641.3	NM_025641.3		66576	114051412	NM_025641.3	Uqcrh	NP_079917.1	ILMN_2512849	006510139	S	77	GTTGGATCCCAAACCGGCTCCCGACATGGGACTAGAGGACGAACGAAAGA	4	-	115747549-115747574:115747575-115747598	4qD1	Mus musculus ubiquinol-cytochrome c reductase hinge protein (Uqcrh), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]	2210416J04Rik; 2310021J10Rik; 2610041P16Rik	2210416J04Rik; 2310021J10Rik; 2610041P16Rik
Mus musculus	RefSeq	ILMN_210609	ILMN_210609	ACAD9	NM_172678.3	NM_172678.3		229211	100817932	NM_172678.3	Acad9	NP_766266.3	ILMN_1253361	004480224	S	1705	GGTGTTAAAGCGGGTAGCCAACATCCTCATCAACTTGTATGGCATGACTG	3	+	35988274-35988323	3qB	Mus musculus acyl-Coenzyme A dehydrogenase family, member 9 (Acad9), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	4732402K02; C630012L17Rik; 2600017P15Rik; NPD002	4732402K02; C630012L17Rik; 2600017P15Rik; NPD002
Mus musculus	RefSeq	ILMN_217273	ILMN_237837	1810007M14RIK	XM_904433.2	XM_904433.2		67367	94400801	XM_904433.2	1810007M14Rik	XP_909526.3	ILMN_1228596	006350521	S	2720	GCCGATATCTTGTACATTTAGCAGATACAATTTACAGGAACAGTATTGGG				16qC3.3	PREDICTED: Mus musculus RIKEN cDNA 1810007M14 gene, transcript variant 5 (1810007M14Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217273	ILMN_237837	1810007M14RIK	XM_904433.2	XM_904433.2		67367	94400801	XM_904433.2	1810007M14Rik	XP_909526.3	ILMN_2681311	000830288	S	1817	ACCTGGAAGGCCTGTCCAGTGATGATGAAGAGACGTCTACAGATATTACT				16qC3.3	PREDICTED: Mus musculus RIKEN cDNA 1810007M14 gene, transcript variant 5 (1810007M14Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198858	ILMN_198858	LOC244282	XM_146232.2	XM_146232.2			38089118	XM_146232.2	LOC244282		ILMN_1216683	006380504	S	1456	GTCTCTGACCATTCTGATGAGCTGAGGGTTAGGCTGCTGCAACTAGAGGC										
Mus musculus	MEEBO	ILMN_224286	ILMN_224286	HIST1H3G	scl097908.1_77				21489954	NM_145073	Hist1h3g		ILMN_2777961	007400551	S	484	AGCCACCCATCTTCCAAAAAAAGAACTGTAGCGCTTTTTCCAACTTGTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200255	ILMN_200255	LOC386078	XM_359058.1	XM_359058.1			38081121	XM_359058.1	LOC386078		ILMN_1258452	003870215	S	1440	CCTAGCAAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACAC										
Mus musculus	RefSeq	ILMN_212057	ILMN_230561	DUOX2	XM_988431.1	XM_988431.1		214593	94368607	XM_988431.1	Duox2	XP_993525.1	ILMN_2622260	000070592	S	1203	CCCTGAACCCTGAAGATTTTCGGATAGAAATGACACCCCAAGAAGGGCTA				2qE5	PREDICTED: Mus musculus dual oxidase 2, transcript variant 1 (Duox2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process by which the anatomical structures of the adenohypophysis are generated and organized. Morphogenesis pertains to the creation of form. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 48855] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IMP]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IMP]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223050	ILMN_223050	CCDC98	NM_172405.1	NM_172405.1		70681	27369522	NM_172405.1	Ccdc98	NP_765993.1	ILMN_2908022	000430348	S	2447	CGGAAGACACCTGATATCAATCTCTGGCCTTCATAAACTCCTGTGCACAC	5	-	101045106-101045155	5qE4	Mus musculus coiled-coil domain containing 98 (Ccdc98), mRNA.				AV118690; 3830405G04Rik; AI506069; 5630400M01Rik; AL024423	AV118690; 3830405G04Rik; AI506069; 5630400M01Rik; AL024423
Mus musculus	RefSeq	ILMN_201194	ILMN_201194	LOC382064	XM_356144.1	XM_356144.1			38089745	XM_356144.1	LOC382064		ILMN_1256896	001260044	S	1157	GGAAGCCACGCTACCCCAAGTCACAGTCAGATCCTGAAGGCTTTCCTCTC										
Mus musculus	RefSeq	ILMN_190986	ILMN_249913	PITPNC1	NM_145823.2	NM_145823.2		71795	84490397	NM_145823.2	Pitpnc1	NP_665822.1	ILMN_2705846	000460364	S	1164	GCCAAAGACCTCGAGAGAGAAGTGTGCTTCATCGATATCGCCTGTGATGA	11	-	107113366-107113415	11qE1	Mus musculus phosphatidylinositol transfer protein, cytoplasmic 1 (Pitpnc1), mRNA. XM_001002025 XM_001002036	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence ISO]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of phosphatidylinositol into, out of, within or between cells. Phosphatidylinositol refers to any glycophospholipids with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 8526] [evidence ISO]	Dnr411; RDGBB; rdgB-beta; RDGBB1; C330017I21Rik; AI851387; 1110020B03Rik; AI662802; 5830436L09Rik; MGC118005	Dnr411; RDGBB; rdgB-beta; RDGBB1; C330017I21Rik; AI851387; 1110020B03Rik; AI662802; 5830436L09Rik; MGC118005
Mus musculus	RefSeq	ILMN_197738	ILMN_197738	LOC381498	XM_358600.1	XM_358600.1			38077710	XM_358600.1	LOC381498		ILMN_1236697	002680292	S	486	GGAGGCACATCCCATTATACTCTCAAACCCTGTCTGCACTCAGGGAGAGG										
Mus musculus	RefSeq	ILMN_214979	ILMN_214979	IFIT3	NM_010501.1	NM_010501.1		15959	6754287	NM_010501.1	Ifit3	NP_034631.1	ILMN_2944666	007510020	S	1458	CTGTGAGACAGATGTGCTGTGGAGTGCTGCTTATGGGGAGAATGTGCTGA	19	+	34662957-34663006	19qC1	Mus musculus interferon-induced protein with tetratricopeptide repeats 3 (Ifit3), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ifi49; MGC107331	Ifi49; MGC107331
Mus musculus	RefSeq	ILMN_222751	ILMN_222751	SART3	NM_016926.1	NM_016926.1		53890	8394238	NM_016926.1	Sart3	NP_058622.1	ILMN_2800297	001660661	S	3508	GCTCACTTCGAAATGCCATGTCTAGTACAAAGTTGAGTCTCCCCATTGAG	5	-	114192483-114192532	5qF	Mus musculus squamous cell carcinoma antigen recognized by T-cells 3 (Sart3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AU045857; mKIAA0156	AU045857; mKIAA0156
Mus musculus	RefSeq	ILMN_222751	ILMN_222751	SART3	NM_016926.1	NM_016926.1		53890	8394238	NM_016926.1	Sart3	NP_058622.1	ILMN_1216233	003800079	S	2952	CTGGCCACCACGGGCCCTGGAGACGGAAGGGCTGGGCACTTGCCTGCGCT	5	-	114193039-114193088	5qF	Mus musculus squamous cell carcinoma antigen recognized by T-cells 3 (Sart3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AU045857; mKIAA0156	AU045857; mKIAA0156
Mus musculus	Riken	ILMN_206187	ILMN_206187	6330444G18RIK	ri|6330444G18|PX00315G03|AK078102|3345					AK078102	6330444G18Rik		ILMN_1244545	006940093	S	3046	TGCCCAAGGACTTGTGCCAATGGCTAGTCAAGTGAGGGTTGCAGACCCAG										
Mus musculus	RefSeq	ILMN_200864	ILMN_200864	LOC384611	XM_357743.1	XM_357743.1			38086654	XM_357743.1	LOC384611		ILMN_1224401	003990192	S	988	GCTTGTTCTAAGGAGCCAGCTATACCTAAGCCAATGGGAAACTACTGGCG										
Mus musculus	RefSeq	ILMN_198696	ILMN_198696	LOC245668	XM_142236.4	XM_142236.4			38086907	XM_142236.4	LOC245668		ILMN_2532603	007100612	S	1663	GTCCGACAGGAAAAAGACCAGTGGTTCAGCTGTGATGATGCTGTAGTCAC										
Mus musculus	Riken	ILMN_203815	ILMN_203815	5031409G22RIK	ri|6720482J09|PX00060F13|AK032967|3032					AK032967	5031409G22Rik		ILMN_1239165	001690731	S	2884	CTGAGGCCGTGCCAGAACCACCTGGACAAGATACCCCTAGATTCCTGGAC										
Mus musculus	MEEBO	ILMN_216582	ILMN_216582	1700036A12RIK	scl36858.4.1_42				51764911	XM_489276	1700036A12Rik		ILMN_2672809	005690154	S	1487	ACTGCACAGCCCGGATTTAAGTTCTTGAGACTTCCTGAGAGGCCACCCTC										
Mus musculus	RefSeq	ILMN_216980	ILMN_216980	2410015N17RIK	NM_023203.1	NM_023203.1		66422	12963572	NM_023203.1	2410015N17Rik	NP_075692.1	ILMN_1228334	001980446	S	529	CGGAGCTGAGAGACCAGGCTTCCACATAAAAACGAGGTGCTAATCTGGCC	7	-	134400528-134400549:134400550-134400577	7qF3	Mus musculus RIKEN cDNA 2410015N17 gene (2410015N17Rik), mRNA.				RS21-C6; AI854235	RS21-C6; AI854235
Mus musculus	RefSeq	ILMN_196516	ILMN_253239	4930524N10RIK	XR_001603.1	XR_001603.1		75071	94408464	XR_001603.1	4930524N10Rik		ILMN_1249012	001500739	S	795	GGTCCATAAATGAGTGGGCTGGTGTTTGCAAAATGTGCCAGGAGACTCCC	X	-	150773842-150773891	XqF3	PREDICTED: Mus musculus RIKEN cDNA 4930524N10 gene (4930524N10Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_212839	ILMN_260475	EXOSC6	NM_028274.2	NM_028274.2		72544	142383043	NM_028274.2	Exosc6	NP_082550.1	ILMN_2630909	001230661	S	422	TCTGGAGCCCGCCGTGCGCCTGGGGCGCTACCCGCGTGCTCAGCTCGAGG	8	+	113580660-113580709	8qE1	Mus musculus exosome component 6 (Exosc6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [evidence IEA]	MGC151362; Mtr3; C76919; 2610510N21Rik	MGC151362; Mtr3; C76919; 2610510N21Rik
Mus musculus	RefSeq	ILMN_186798	ILMN_260475	EXOSC6	NM_028274.2	NM_028274.2		72544	142383043	NM_028274.2	Exosc6	NP_082550.1	ILMN_2685849	003780689	S	977	GCACAGAACCAAAGCACTGGACAGCTCTGTTGGAAAGGTTTAAAAGGCCG	8	+	113581215-113581264	8qE1	Mus musculus exosome component 6 (Exosc6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [evidence IEA]	MGC151362; Mtr3; C76919; 2610510N21Rik	MGC151362; Mtr3; C76919; 2610510N21Rik
Mus musculus	RefSeq	ILMN_216430	ILMN_216430	IL21	NM_021782.2	NM_021782.2		60505	118130431	NM_021782.2	Il21	NP_068554.1	ILMN_1215795	001690647	S	2802	GAGAGGTTGTTGTAGGTCATAGGAGTTCAGAGGAAATCAGTTATGGCCGT	3	-	37121901-37121950	3qB	Mus musculus interleukin 21 (Il21), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence NAS]; The process of apoptosis in B cells [goid 1783] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity [goid 45954] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer cell differentiation [goid 32825] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of natural killer cell cytokine production [goid 2729] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-10 production [goid 32733] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA];  [goid 5126] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199103	ILMN_199103	LOC328902	XM_283516.2	XM_283516.2			38090919	XM_283516.2	LOC328902		ILMN_1223789	005490475	S	596	GAGGGACTTCCGGGTCAGAGAATTGCACAGTGAGGTAGAACACAGAGGCC										
Mus musculus	RefSeq	ILMN_240944	ILMN_240944	KCNH6	NM_001037712.1	NM_001037712.1		192775	83423517	NM_001037712.1	Kcnh6	NP_001032801.1	ILMN_2859453	006760504	S	2718	CTCACCTCTGTGTCCCCTGGAAGTACAGGGACTGGGTGGTCCCCACTTTT	11	+	105895243-105895292	11qE1	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 6 (Kcnh6), mRNA. XM_922264 XM_922267	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	MGC129366; m-erg2	MGC129366; m-erg2
Mus musculus	RefSeq	ILMN_199221	ILMN_240944	KCNH6	NM_001037712.1	NM_001037712.1		192775	83423517	NM_001037712.1	Kcnh6	NP_001032801.1	ILMN_2534475	000510114	S	2646	CGCGGCAATGGACAAATCTCTGGTGCCGTCCTCAGAACAAGAGCAGCCCA	11	+	105895171-105895220	11qE1	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 6 (Kcnh6), mRNA. XM_922264 XM_922267	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	MGC129366; m-erg2	MGC129366; m-erg2
Mus musculus	RefSeq	ILMN_220167	ILMN_220167	BCCIP	NM_025392.1	NM_025392.1		66165	13384773	NM_025392.1	Bccip	NP_079668.1	ILMN_2862214	000380301	S	948	CCCTGAAAGACCATCTCTCCGTCTAGTCCATTTCCCCCAGACAGTGACAG	7	+	133559196-133559220:133559221-133559245	7qF3	Mus musculus BRCA2 and CDKN1A interacting protein (Bccip), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Cyclin-dependent protein kinase (CDK) complex found in the nucleus [goid 19908] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence ISO]	Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19207] [evidence ISO]	TOK-1; 1110013J05Rik	TOK-1; 1110013J05Rik
Mus musculus	RefSeq	ILMN_220167	ILMN_220167	BCCIP	NM_025392.1	NM_025392.1		66165	13384773	NM_025392.1	Bccip	NP_079668.1	ILMN_2765373	004480673	S	1126	ATTTTTTTCTTTATTTTGGTCAAATTATGAATGATTGGTTAAAAACTTCC	7	+	133559374-133559423	7qF3	Mus musculus BRCA2 and CDKN1A interacting protein (Bccip), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Cyclin-dependent protein kinase (CDK) complex found in the nucleus [goid 19908] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence ISO]	Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19207] [evidence ISO]	TOK-1; 1110013J05Rik	TOK-1; 1110013J05Rik
Mus musculus	Riken	ILMN_202889	ILMN_202889	7420700D11RIK	ri|7420700D11|PX00024C20|AK033036|2783					AK033036	7420700D11Rik		ILMN_1256860	007100653	S	2407	CCGAGGAAGGAGGCACATGCAGTTCTGGCTATGGAAGAGCTGATTTCTCC										
Mus musculus	RefSeq	ILMN_197462	ILMN_248355	GM288	XM_907202.3	XM_907202.3		239083	149265947	XM_907202.3	Gm288	XP_912295.1	ILMN_1236306	000520541	S	703	CAGGTATGATCCCGCAGTCTGGAGTCTTTGGCTTCCCACCAGGGAATAAC				14qC1	PREDICTED: Mus musculus gene model 288, (NCBI) (Gm288), mRNA.					
Mus musculus	RefSeq	ILMN_199642	ILMN_199642	LOC382824	XM_356700.1	XM_356700.1			38075424	XM_356700.1	LOC382824		ILMN_1223818	000870477	S	505	CTTGCAGGAAATGTAACCAAGCATACAAGAGCCCTACATCGGGAGGCCAT										
Mus musculus	RefSeq	ILMN_223485	ILMN_225757	SLITRK2	NM_198863.1	NM_198863.1		245450	110350663	NM_198863.1	Slitrk2	NP_942563.1	ILMN_1219943	001740458	S	2367	GAAGGAAGGAGACCCAGTGGCCTATTACCGAAATCTGCAGGACTTCAGCT	X	+	63909190-63909239	XqA7.1	Mus musculus SLIT and NTRK-like family, member 2 (Slitrk2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A930040J07	A930040J07
Mus musculus	RefSeq	ILMN_213961	ILMN_213961	LRP4	NM_172668.2	NM_172668.2		228357	27883855	NM_172668.2	Lrp4	NP_766256.2	ILMN_1244134	004060132	S	7583	CCTGAGTGGAAAGGGGCAAGGATCTTTTTGCACTTGGGCTGTTCAGAATG	2	+	91353783-91353832	2qE1	Mus musculus low density lipoprotein receptor-related protein 4 (Lrp4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IMP]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IMP]; The growth of a synapse at a neuromuscular junction, the site of apposition of a motor end plate and the subneural cleft of the skeletal muscle fiber that it innervates [goid 51124] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IDA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mdig; D230026E03; Megf7; 6430526J12Rik	mdig; D230026E03; Megf7; 6430526J12Rik
Mus musculus	RefSeq	ILMN_254174	ILMN_254174	AHNAK2	NM_001033476.1	NM_001033476.1		382643	85702000	NM_001033476.1	Ahnak2	NP_001028648.1	ILMN_3161105	004040450	S	3174	CCTCGACTCTTTCGCTAATGGCAAGCTTTGGGGCGCAGACTGTGAGGGTG	12	-	114010628-114010677	12qF1	Mus musculus AHNAK nucleoprotein 2 (Ahnak2), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Gm1185	Gm1185
Mus musculus	RefSeq	ILMN_221878	ILMN_221878	H1FX	NM_198622.1	NM_198622.1		243529	38348565	NM_198622.1	H1fx	NP_941024.1	ILMN_3122845	001450735	A	837	CGATGCTGCGTTCTGTTTGCTTTAGGTTTTTGAAACGGCCCTGGCGACGC	6	-	87930590-87930639	6qD1	Mus musculus H1 histone family, member X (H1fx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Gm461; H1X	Gm461; H1X
Mus musculus	RefSeq	ILMN_221878	ILMN_221878	H1FX	NM_198622.1	NM_198622.1		243529	38348565	NM_198622.1	H1fx	NP_941024.1	ILMN_1247646	002470088	S	634	AAGAAAGTGAAGAAGGCGGCCAAACCCAGCGTGCCCAAGGTGCCCAAGGG	6	-	87930793-87930842	6qD1	Mus musculus H1 histone family, member X (H1fx), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Gm461; H1X	Gm461; H1X
Mus musculus	RefSeq	ILMN_214651	ILMN_214651	FOXC1	NM_008592.2	NM_008592.2		17300	50345971	NM_008592.2	Foxc1	NP_032618.2	ILMN_2886260	004290278	S	2141	AGTAGCTGTCAGATGGCTTTCCCTGCCAGTCAGTCTCTGTACCGCACGTC	13	+	31900655-31900704	13qA3.2	Mus musculus forkhead box C1 (Foxc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence ISO]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the lacrimal gland over time, from its formation to the mature structure. The lacrimal gland produces secretions that lubricate and protect the cornea of the eye [goid 32808] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IGI]; Any process that modulates the size of blood vessels [goid 50880] [evidence IGI]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IGI]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IGI]; The process whose specific outcome is the progression of the lymphatic vasculature over time, from its formation to the mature structure [goid 1945] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IGI]; The expansion of a cardiac muscle cell population by cell division [goid 60038] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IMP]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IGI]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IGI]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IGI]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IGI]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 48341] [evidence IGI]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence ISO]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mesenchymal cell [goid 48762] [evidence IMP]	Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IDA]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FREAC3; frkhda; ch; Mf1; fkh-1; Mf4; Fkh1	FREAC3; frkhda; ch; Mf1; fkh-1; Mf4; Fkh1
Mus musculus	RefSeq	ILMN_197995	ILMN_197995	LOC224330	XM_139667.1	XM_139667.1			20895661	XM_139667.1	LOC224330		ILMN_1236257	006760296	S	320	GTGACAAAGACTTGAATCCTGGTGTGAAGTGGATGAGTCTTCTGGAACGC										
Mus musculus	RefSeq	ILMN_209692	ILMN_209692	APBA1	NM_177034.3	NM_177034.3		319924	79749979	NM_177034.3	Apba1	NP_796008.2	ILMN_1256755	002030309	S	4241	GCCAGCTTCCACTTATTCTTGGTCCAAAGAGCAGTTTGTTTCCATGTGGG	19	+	24021696-24021745	19qB	Mus musculus amyloid beta (A4) precursor protein binding, family A, member 1 (Apba1), mRNA.		The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IPI]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of gamm-aminobutyric acid by a cell or group of cells. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues [goid 14051] [evidence IMP]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IGI]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	X11; Mint; Lin-10; Mint1; 6430513E09Rik; X11alpha	X11; Mint; Lin-10; Mint1; 6430513E09Rik; X11alpha
Mus musculus	RefSeq	ILMN_185505	ILMN_230613	KRT13	NM_010662.1	NM_010662.1		16663	6754479	NM_010662.1	Krt13	NP_034792.1	ILMN_2704972	004610414	S	1232	TCAACTCCGGAGGAAATAACACTACTACCTCCAACGGGTCCCCCTCCTCC	11	-	99978942-99978980:99979297-99979307	11qD	Mus musculus keratin 13 (Krt13), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Krt1-13; Krt-1.13; CK13; K13	Krt1-13; Krt-1.13; CK13; K13
Mus musculus	RefSeq	ILMN_201269	ILMN_201269	LOC385010	XM_357987.1	XM_357987.1			38090282	XM_357987.1	LOC385010		ILMN_1247869	006860021	S	59	ACTGCATCCAATTGGATCAGACACAGTGCCCGACTAGGATCCTCAATGGG										
Mus musculus	RefSeq	ILMN_217039	ILMN_217039	MNS1	NM_008613.2	NM_008613.2		17427	133892760	NM_008613.2	Mns1	NP_032639.1	ILMN_2678431	006280088	S	1739	GTTGGTGACAGTAGGCCCTGGTCTATCTGCATGTTCTAAAACATCCTCCT	9	+	72306284-72306333	9qD	Mus musculus meiosis-specific nuclear structural protein 1 (Mns1), mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]		AW546487	AW546487
Mus musculus	RefSeq	ILMN_210289	ILMN_261279	SETD1B	NM_001040398.1	NM_001040398.1		208043	94536714	NM_001040398.1	Setd1b	NP_001035488.1	ILMN_1258086	005090678	S	4590	TTTTGGCGTTCCGAACCAATCCCTGTAGATAGACTGCCATAACAGACTAC	5	+	123617293-123617342	5qF	Mus musculus SET domain containing 1B (Setd1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	MGC39035; BC035291; AA516740; mKIAA1076	MGC39035; BC035291; AA516740; mKIAA1076
Mus musculus	RefSeq	ILMN_209526	ILMN_209526	CPSF3L	NM_028020.2	NM_028020.2		71957	31980686	NM_028020.2	Cpsf3l	NP_082296.1	ILMN_1249116	005560739	S	1786	GAGTCCATTCTAATCCAGGCTGCCGCCCATTCGGAGGACCCTGGTACCAA	4	+	154732248-154732297	4qE2	Mus musculus cleavage and polyadenylation specific factor 3-like (Cpsf3l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	AU044035; 2410006F12Rik	AU044035; 2410006F12Rik
Mus musculus	RefSeq	ILMN_239358	ILMN_239358	RHOX3F	NM_001040089.1	NM_001040089.1		621852	91598659	NM_001040089.1	Rhox3f	NP_001035178.1	ILMN_2964436	007150537	S	61	GGACAACACCCAAGGTACCAAGGTTTTGCCGGCTGAAGAGTCAAGAAATG	X	+	34996026-34996039:34996290-34996325	XqA3.3	Mus musculus reproductive homeobox 3F (Rhox3f), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_217440	ILMN_217440	A430057O09	scl26339.9.882_5	NM_183305.1			34303980	NM_183305.1	A430057O09		ILMN_1229751	002490543	S	2205	TGACATTATTTCAACTCAGTGACAGCCTGTCTGAGCCCGCCAGGCAGACC										
Mus musculus	RefSeq	ILMN_210527	ILMN_310361	EG633692	XM_001472244.1	XM_001472244.1		633692	149266178	XM_001472244.1	EG633692	XP_001472294.1	ILMN_1214659	003370400	S	224	GTAACCGCCTGTTTCAAGAAAACTCCCTTCTCAACTCTCTTCCCCTCAAT	14	-	53179709-53179758	14qC2	PREDICTED: Mus musculus predicted gene, EG633692 (EG633692), mRNA.					
Mus musculus	RefSeq	ILMN_218776	ILMN_218776	GBP6	NM_145545.2	NM_145545.2		229900	31559938	NM_145545.2	Gbp6	NP_663520.1	ILMN_2860645	006330692	S	2639	GAGGCCCACAGCCAGACACTGTACAGAGAGAGAATGAGAGTCTTGGGAAC	3	+	142484560-142484609	3qH1	Mus musculus guanylate binding protein 6 (Gbp6), mRNA.				Gbp7; 9830147J24Rik	Gbp7; 9830147J24Rik
Mus musculus	RefSeq	ILMN_218776	ILMN_218776	GBP6	NM_145545.2	NM_145545.2		229900	31559938	NM_145545.2	Gbp6	NP_663520.1	ILMN_2860649	005420170	S	2915	CTGTAACTGTGGTGCCAGGTGATCTGACACCCTCATACAGACATACATGC	3	+	142484836-142484885	3qH1	Mus musculus guanylate binding protein 6 (Gbp6), mRNA.				Gbp7; 9830147J24Rik	Gbp7; 9830147J24Rik
Mus musculus	RefSeq	ILMN_210903	ILMN_210903	SERPINA3A	XM_282560.6	XM_282560.6		74069	94393057	XM_282560.6	Serpina3a	XP_282560.6	ILMN_2610378	005220047	S	1562	CCATCTGCATCACCCAAAATGAATAGGTAGGAGCAAACAGTAGATAAACC	12	+	105359959-105360008	12qE	PREDICTED: Mus musculus serine (or cysteine) peptidase inhibitor, clade A, member 3A, transcript variant 1 (Serpina3a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219654	ILMN_219654	C630004H02RIK	NM_175454.2	NM_175454.2		217310	118129878	NM_175454.2	C630004H02Rik	NP_780663.1	ILMN_3055445	003940593	I	2072	ATCTGATGGGGAGTCCAGCCAAACATGGAGAGAGCAACGGAGATTGTCCA	11	-	115211276-115211316:115211806-115211814	11qE2	Mus musculus RIKEN cDNA C630004H02 gene (C630004H02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_219654	ILMN_219654	C630004H02RIK	NM_175454.2	NM_175454.2		217310	118129878	NM_175454.2	C630004H02Rik	NP_780663.1	ILMN_3132223	000990730	A	2946	GCTAGTGAAGAAGGCTGGAGGCTGACGCTTGTGAAGCAGGACCGTGGAGT	11	-	115209264-115209313	11qE2	Mus musculus RIKEN cDNA C630004H02 gene (C630004H02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_220869	ILMN_324925	1700003H04RIK	XR_034486.1	XR_034486.1		384775	149251389	XR_034486.1	1700003H04Rik		ILMN_1217966	002000711	S	375	CCTAGGGGGAGACAGCAGAATGGCCTGCAAATCCATCATTCTTTTCTGGC	3	-	124281380-124281429	3qG1	PREDICTED: Mus musculus RIKEN cDNA 1700003H04 gene (1700003H04Rik), misc RNA.					
Mus musculus	MEEBO	ILMN_219725	ILMN_219725	HNRPA1	scl0015382.1_302	XM_122922.1			20903670	XM_122922.1	Hnrpa1		ILMN_2712751	001990156	S	1594	AAATTGAATAACGGTATCAGATAAAATAACAGATGGGAATGAAGCTTATG										
Mus musculus	RefSeq	ILMN_218744	ILMN_218744	SUOX	NM_173733.2	NM_173733.2		211389	31343458	NM_173733.2	Suox	NP_776094.2	ILMN_2912532	004070132	S	1831	TCTTCTGGCCCCTGACCCTGTGCTTGGAGAGAGGCTGCTCGGGTGAGAGA	10	-	128107354-128107403	10qD3	Mus musculus sulfite oxidase (Suox), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with molybdenum (Mo) ions [goid 30151] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: SO3(2-) (sulfite) + O2 + H2O = SO4(2-) (sulfate) + H2O2 [goid 8482] [evidence IEA]	MGC28458	MGC28458
Mus musculus	RefSeq	ILMN_201433	ILMN_201433	LOC385156	XM_358091.1	XM_358091.1			38093695	XM_358091.1	LOC385156		ILMN_2542276	001400128	S	181	GGAGAATATTTCCCCCGAATAACAAGTGTTTCAGATGTTAAAAAGAGAAG										
Mus musculus	RefSeq	ILMN_198324	ILMN_198324	LOC271490	XM_195069.2	XM_195069.2			38083858	XM_195069.2	LOC271490		ILMN_2531281	000990279	S	644	CCTGCTGGGCTATTTCCTACTTGACTGATGGTCCAAATGAGCACACTGAG										
Mus musculus	MEEBO	ILMN_190818	ILMN_190818	SCL0004082.1_371	scl0004082.1_371	XM_355695.1			38081987	XM_355695.1	scl0004082.1_371		ILMN_1256531	005290372	S	10	GTCAAGGAGCAACAGCAAAGTTCTTTTCGTATATGAGGAGAGTTAGGGGC										
Mus musculus	Riken	ILMN_206890	ILMN_206890	E030045B01RIK	ri|E030045B01|PX00206B13|AK087325|1419					AK087325	E030045B01Rik		ILMN_2583454	003830576	S	1185	TGAGTTTGCCTACCACAATCCCCAGCAACTTCCTGTACTAATTGAGTCCC										
Mus musculus	RefSeq	ILMN_218302	ILMN_218302	OLFR1157	NM_146849.1	NM_146849.1		258846	22129164	NM_146849.1	Olfr1157	NP_667060.1	ILMN_2694128	007150717	S	757	GGGACGATCCTTTCCATTTATTGTTCTTCTACTTCAGACAACAGTGGAGA	2	-	87802241-87802290	2qD	Mus musculus olfactory receptor 1157 (Olfr1157), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR174-1	MOR174-1
Mus musculus	RefSeq	ILMN_197441	ILMN_314937	7530422B04RIK	XM_001480604.1	XM_001480604.1		228792	149250069	XM_001480604.1	7530422B04Rik	XP_001480654.1	ILMN_1237859	007210328	S	598	TTAGGGCTGCCTCGGCCAAAAGGCCCACGCTGAACCACTGGAGAAACACA	2	-	153474538-153474555:153474556-153474587	2qH1	PREDICTED: Mus musculus RIKEN cDNA 7530422B04 gene (7530422B04Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200981	ILMN_200981	LOC384689	XM_357793.1	XM_357793.1			38087613	XM_357793.1	LOC384689		ILMN_1227050	000610390	S	390	AGGATGCCTGCGCTTCCAAAAGTGTCCCGTGGGCTCAGAACCTGCAAGCT										
Mus musculus	RefSeq	ILMN_209067	ILMN_209067	ACSM4	NM_178414.2	NM_178414.2		233801	31341508	NM_178414.2	Acsm4	NP_848501.1	ILMN_2970744	007610168	S	1849	GGAATGGGGAAGAGCATAGCTGGATGAGAACCTTGCTAGAAGTGATGCGG	7	+	126857840-126857858:126857859-126857889	7qF2	Mus musculus acyl-CoA synthetase medium-chain family member 4 (Acsm4), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence ISO]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + n malonyl-CoA + 2n NADH + 2n NADPH + 4n H+ = a long-chain acyl-CoA + n CoA + n CO2 + 2n NAD+ + 2n NADP+ [goid 4321] [evidence ISO]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	MGC56918	MGC56918
Mus musculus	RefSeq	ILMN_198953	ILMN_324233	LOC546155	XR_031804.1	XR_031804.1		546155	149260164	XR_031804.1	LOC546155		ILMN_1220215	002710215	S	578	CAGCCCAGGTTGGAGTGCTCAAGATTCAGGTTCGTTGTTATGAAGATGGC	9	-	98773733-98773782	9qE3.3	PREDICTED: Mus musculus similar to F-actin capping protein subunit alpha-1 (CapZ 36/32) (Beta-actinin subunit I) (LOC546155), misc RNA.					
Mus musculus	RefSeq	ILMN_218795	ILMN_218795	OTOP2	NM_172801.2	NM_172801.2		237987	116063537	NM_172801.2	Otop2	NP_766389.2	ILMN_2700317	004210445	S	2152	CAAGACATACCCATTTATTCCTGCATGACCCTGGAGCCTCGGGAGACGGA	11	+	115190508-115190557	11qE2	Mus musculus otopetrin 2 (Otop2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-117K15.5; 4732464P15	RP23-117K15.5; 4732464P15
Mus musculus	RefSeq	ILMN_198484	ILMN_198484	LOC223385	XM_139336.3	XM_139336.3			38085703	XM_139336.3	LOC223385		ILMN_1248536	002470048	S	1285	GGGAAAGGAGCCAGTTCTCACTGCTTGAAGATGCCATCCTCTGTGTGCAG										
Mus musculus	RefSeq	ILMN_222116	ILMN_222116	GUCA2B	NM_008191.1	NM_008191.1		14916	7110614	NM_008191.1	Guca2b	NP_032217.1	ILMN_2744846	007550358	S	531	GGCAATGTGGATGCAGAGTTGCCATATTTGGCCCCCAGGCAGCTGCACCT	4	-	119329227-119329276	4qD2.1	Mus musculus guanylate cyclase activator 2b (retina) (Guca2b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IMP]; The regulated release of a fluid by a cell or group of cells in a multicellular organism [goid 7589] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]	Increases the activity of an enzyme [goid 8047] [evidence IEA]	Ugn; Gcap2; AV066530	Ugn; Gcap2; AV066530
Mus musculus	RefSeq	ILMN_216479	ILMN_216479	SNX31	NM_025712.4	NM_025712.4		66696	146135014	NM_025712.4	Snx31	NP_079988.3	ILMN_2671550	004060546	S	2291	GCAAAAATAACTAATGTTCTTTTCTGAGTTAGCTAATTATGAAATAAATA				15qB3.1	Mus musculus sorting nexin 31 (Snx31), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_203152	ILMN_203152	IGBP1	ri|6720407F13|PX00059I19|AK032709|2316					AK032709	Igbp1		ILMN_1228700	005290445	S	1998	TGGGATAGGGGAGAGCATAAATCCAGGACTGAGCCATGTTGAACCTGAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism [goid 9607] [evidence IEA]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]			
Mus musculus	MEEBO	ILMN_184184	ILMN_184184	ZFP184	scl45004.6_40				33942077	NM_183014	Zfp184		ILMN_2416545	006590762	S	8	GGGCTGTTCTGATCCAAGTATGTTATTAAAACAACATTGTGGCAAGCTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188739	ILMN_188739	CAMK4	scl15233.1.1_225				6753251	NM_009793	Camk4		ILMN_1229721	005810601	S	2	GACTGTCCTCTGTGGTGAAAGAACCCCGTTAAGCTATATGTCTGATCTTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IMP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence TAS]		
Mus musculus	MEEBO	ILMN_188739	ILMN_188739	CAMK4	scl15233.1.1_225				6753251	NM_009793	Camk4		ILMN_2455304	005560358	S	9	GCTGTGAGCAAAACCAGTGCTGCCAGACTAAACTTTAGTGAGGTCCAGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IMP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence TAS]		
Mus musculus	RefSeq	ILMN_199052	ILMN_199052	LOC331209	XM_282856.2	XM_282856.2			38090649	XM_282856.2	LOC331209		ILMN_1253622	002900612	S	45	CCATACTCCAGTGGGAGGGTGTGACTTTGCTTCCATTCACCACAATGAGG										
Mus musculus	RefSeq	ILMN_205362	ILMN_242725	CCDC15	XM_986206.1	XM_986206.1		245902	94387003	XM_986206.1	Ccdc15	XP_991300.1	ILMN_1250884	002630630	S	1378	GGTTGAAAGTGTCTTGCTGTGTAGCCTAGGCTGATGTGAGACCCACAGTC				9qA4	PREDICTED: Mus musculus coiled-coil domain containing 15, transcript variant 2 (Ccdc15), mRNA.					
Mus musculus	RefSeq	ILMN_215236	ILMN_215236	EP400	NM_029337.2	NM_029337.2		75560	153945879	NM_029337.2	Ep400	NP_083613.2	ILMN_2657066	000430324	S	10563	GCCCAAGCCATGTTTGGTGGGACCCAAAAGGCAATGTGAGAAGCAGAGTC				5qF	Mus musculus E1A binding protein p400 (Ep400), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mDomino; AU023439; 1700020J09Rik; mKIAA1498; p400	mDomino; AU023439; 1700020J09Rik; mKIAA1498; p400
Mus musculus	RefSeq	ILMN_205808	ILMN_215236	EP400	NM_029337.2	NM_029337.2		75560	153945879	NM_029337.2	Ep400	NP_083613.2	ILMN_2575376	004540440	S	748	AACAGCCCCACTGGAGGCTTTGTGGATGCCAGTGTGCTTGTGAGGCAGAT				5qF	Mus musculus E1A binding protein p400 (Ep400), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mDomino; AU023439; 1700020J09Rik; mKIAA1498; p400	mDomino; AU023439; 1700020J09Rik; mKIAA1498; p400
Mus musculus	RefSeq	ILMN_215698	ILMN_215698	HSP90AA1	NM_010480.5	NM_010480.5		15519	146134469	NM_010480.5	Hsp90aa1	NP_034610.1	ILMN_2752883	001110241	S	2479	GTGATACTGTGATACTATAGGTTTAACTCAAGAGGTTGATAGAGCGTTTG				12qF1	Mus musculus heat shock protein 90, alpha (cytosolic), class A member 1 (Hsp90aa1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cytotoxic T cell differentiation [goid 45585] [evidence TAS]; The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones [goid 42026] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence TAS]; Modulates the activity of nitric oxide synthase [goid 30235] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Hspca; AL024080; AL024147; Hsp89; Hsp86-1; hsp4; Hsp90; 86kDa; 89kDa	Hspca; AL024080; AL024147; Hsp89; Hsp86-1; hsp4; Hsp90; 86kDa; 89kDa
Mus musculus	RefSeq	ILMN_215698	ILMN_215698	HSP90AA1	NM_010480.5	NM_010480.5		15519	146134469	NM_010480.5	Hsp90aa1	NP_034610.1	ILMN_2668319	005870142	S	1706	ATATGATTGAGCCCATTGATGAGTATTGTGTGCAACAGCTGAAGGAATTT				12qF1	Mus musculus heat shock protein 90, alpha (cytosolic), class A member 1 (Hsp90aa1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cytotoxic T cell differentiation [goid 45585] [evidence TAS]; The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones [goid 42026] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence TAS]; Modulates the activity of nitric oxide synthase [goid 30235] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Hspca; AL024080; AL024147; Hsp89; Hsp86-1; hsp4; Hsp90; 86kDa; 89kDa	Hspca; AL024080; AL024147; Hsp89; Hsp86-1; hsp4; Hsp90; 86kDa; 89kDa
Mus musculus	RefSeq	ILMN_215136	ILMN_215136	TPPP3	NM_026481.2	NM_026481.2		67971	31980918	NM_026481.2	Tppp3	NP_080757.1	ILMN_2655929	004890112	S	564	CATCCTGGACGACAGTGGCTACGTGAGTGCCTACAAAAACGCAGGCACCT	8	-	107991747-107991796	8qD3	Mus musculus tubulin polymerization-promoting protein family member 3 (Tppp3), mRNA.				Ceacam9; mmCGM8; CGI-38; 2700055K07Rik	Ceacam9; mmCGM8; CGI-38; 2700055K07Rik
Mus musculus	RefSeq	ILMN_198804	ILMN_198804	LOC233637	XM_133608.3	XM_133608.3			38087811	XM_133608.3	LOC233637		ILMN_1244219	005260239	S	2548	CAGTTGTCACACGTGCCATAGAGTGCTACACTGAGAGTCCTGGTGCCCTG										
Mus musculus	RefSeq	ILMN_214992	ILMN_321230	R3HCC1	XM_001479474.1	XM_001479474.1		71843	149265659	XM_001479474.1	R3hcc1	XP_001479524.1	ILMN_2654276	001570753	S	1826	CCCAGTACCACACGCCTTTACAGATACCAGGACAGCCCCTTTGCCCTCAC	14	-	70097191-70097240	14qD2	PREDICTED: Mus musculus R3H domain and coiled-coil containing 1 (R3hcc1), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218055	ILMN_218055	OLFR1367	NM_146533.1	NM_146533.1		258526	33238953	NM_146533.1	Olfr1367	NP_666744.1	ILMN_2690994	006290735	S	697	GCGGCAGGGAGGCTCAAGGCTTTCAACACTTGCTCATCGCACCTGCTGGT	13	+	21439495-21439544	13qA3.1	Mus musculus olfactory receptor 1367 (Olfr1367), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-54E4.6; MOR256-65; MOR256-16	RP23-54E4.6; MOR256-65; MOR256-16
Mus musculus	Riken	ILMN_204399	ILMN_204399	FYB	ri|A130019O12|PX00121M05|AK037454|2216					AK037454	Fyb		ILMN_1236105	000650368	S	1959	CCCCCTGGGTGACTCCTACACTACCGGGTTCATCTGGGAACACAAGGTAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IMP]			
Mus musculus	Riken	ILMN_205680	ILMN_205680	D230021F18RIK	ri|D230021F18|PX00188E14|AK051938|3254					AK051938	D230021F18Rik		ILMN_2574431	000060064	S	2468	CACTGTGAATGTGAGCTTTCAGAATCTCTTCCTGGCTCTGTGGAAGCCAG										
Mus musculus	RefSeq	ILMN_208664	ILMN_208664	CDCA8	NM_026560.3	NM_026560.3		52276	142375934	NM_026560.3	Cdca8	NP_080836.2	ILMN_2588362	001500446	S	387	ATCGAGATCCTTCGGCTCCCCAAGGCGCTGCAAGGGATGAAGTGGCTTGA	4	-	124613606-124613655	4qD2.2	Mus musculus cell division cycle associated 8 (Cdca8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4831429J16Rik; AU044747; MESRGP; BOR; D4Ertd421e	4831429J16Rik; AU044747; MESRGP; BOR; D4Ertd421e
Mus musculus	RefSeq	ILMN_201638	ILMN_208664	CDCA8	NM_026560.3	NM_026560.3		52276	142375934	NM_026560.3	Cdca8	NP_080836.2	ILMN_2543393	006450634	S	1431	CATGCGGGTCCAGGCGCACGGCTCTCCTATTCTGTTGTCATTTGTGCCCT	4	-	124595840-124595889	4qD2.2	Mus musculus cell division cycle associated 8 (Cdca8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4831429J16Rik; AU044747; MESRGP; BOR; D4Ertd421e	4831429J16Rik; AU044747; MESRGP; BOR; D4Ertd421e
Mus musculus	Riken	ILMN_204193	ILMN_204193	C730046C01RIK	ri|C730046C01|PX00087H11|AK050411|2898					AK050411	C730046C01Rik		ILMN_1247981	003460537	S	2592	GACAGTCAGATCCCTGCATCTTTTGACTGGTAGCAGCTCCTCTCTGCCAG										
Mus musculus	RefSeq	ILMN_215593	ILMN_215593	DMC1	NM_010059.2	NM_010059.2		13404	133892178	NM_010059.2	Dmc1	NP_034189.1	ILMN_2661384	002650468	S	1986	TAATATAAATGTAAAATCTATAGCTGAGACATCAAAGAATTTGTGAAAGA	15	-	79392086-79392135	15qE1	Mus musculus DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast) (Dmc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]	Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	sgdp; Mei11; Dmc1h; MGC151144	sgdp; Mei11; Dmc1h; MGC151144
Mus musculus	Riken	ILMN_205166	ILMN_205166	A730012G10RIK	ri|A730012G10|PX00149P23|AK042634|2120					AK042634	A730012G10Rik		ILMN_2570487	004860671	S	1951	CATCCGACCAGAGAGCAGCTATGGTACAGCGGAGAAATAATAGTTATTCC										
Mus musculus	Riken	ILMN_206932	ILMN_206932	XRCC2	ri|D430035K04|PX00194D19|AK085093|1744					AK085093	Xrcc2		ILMN_1215762	003360047	S	1497	AGTGCGCCTGTCCACTGTTGTCGGGGCTGTGTTGATTCCTCTGAAGACTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50769] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199030	ILMN_243739	NPFFR1	XM_905368.1	XM_905368.1		237362	82933259	XM_905368.1	Npffr1	XP_910461.1	ILMN_2533797	006960465	S	989	AGCTGCACTTGCTGTCCGTCTACGCCTTCCCGTTGGCACACTGGCTGGCC				10qB4	PREDICTED: Mus musculus neuropeptide FF receptor 1 (Npffr1), mRNA.		The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199537	ILMN_199537	LOC382706	XM_356634.1	XM_356634.1			38074067	XM_356634.1	LOC382706		ILMN_2535580	000380427	S	110	CGGCGGCCATCGAGGAGGGTTTCAAGTTCTTTGCTCCCATCCTCAGAGAG										
Mus musculus	RefSeq	ILMN_188567	ILMN_188567	WISP1	NM_018865.2	NM_018865.2		22402	118130716	NM_018865.2	Wisp1	NP_061353.1	ILMN_2492264	000130239	S	4838	CACCTTTGAATGTCCTAATAAAGGAGAGCTAGCCCTTGGGCGGCCTGTCA	15	+	66754577-66754626	15qD2	Mus musculus WNT1 inducible signaling pathway protein 1 (Wisp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Elm1; AW146261	Elm1; AW146261
Mus musculus	RefSeq	ILMN_188567	ILMN_188567	WISP1	NM_018865.2	NM_018865.2		22402	118130716	NM_018865.2	Wisp1	NP_061353.1	ILMN_2453775	002600356	S	2790	CCTTCATATTTCCCCTTTGCTTCTGGACCTTGTAAACATGTCAGGGCAGG	15	+	66752529-66752578	15qD2	Mus musculus WNT1 inducible signaling pathway protein 1 (Wisp1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	Elm1; AW146261	Elm1; AW146261
Mus musculus	RefSeq	ILMN_222256	ILMN_222256	OLFR352	NM_146940.1	NM_146940.1		258942	22129028	NM_146940.1	Olfr352	NP_667151.1	ILMN_2809136	004250673	S	473	GTGCCATTTTACATACCCTTCTGCTTGCCCATCTCTCTTTCAGTGGGGGC	2	+	36725560-36725609	2qB	Mus musculus olfactory receptor 352 (Olfr352), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR136-10	MOR136-10
Mus musculus	RefSeq	ILMN_220074	ILMN_220074	CHD1	NM_007690.2	NM_007690.2		12648	142365793	NM_007690.2	Chd1	NP_031716.1	ILMN_1246790	007400747	S	4820	CTTATCTCAGTACCATGATCATCACAAGGACCGCCATCAGGGAGATTCTT	17	+	15905600-15905649	17qA2	Mus musculus chromodomain helicase DNA binding protein 1 (Chd1), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The formation or destruction of chromatin structures [goid 6333] [evidence NAS]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence NAS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI851787; AW555109; MGC141554; 4930525N21Rik	AI851787; AW555109; MGC141554; 4930525N21Rik
Mus musculus	RefSeq	ILMN_212981	ILMN_324368	6330549D23RIK	NR_003619.1	NR_003619.1		229613	153791538	NR_003619.1	6330549D23Rik		ILMN_2632257	006100161	S	6111	GGATGATGATATTCGCCACCAAATGGCTTTGGACTGGGTGAGCCGGGAGC				3qF2.1	Mus musculus RIKEN cDNA 6330549D23 gene (6330549D23Rik), non-coding RNA.					
Mus musculus	RefSeq	ILMN_210208	ILMN_324368	6330549D23RIK	NR_003619.1	NR_003619.1		229613	153791538	NR_003619.1	6330549D23Rik		ILMN_1229583	001400068	S	23024	GCTTTGTGGAAGTTACTGACAGATGCTGGGTTGAGATAAAGACCAAACTC				3qF2.1	Mus musculus RIKEN cDNA 6330549D23 gene (6330549D23Rik), non-coding RNA.					
Mus musculus	RefSeq	ILMN_249837	ILMN_249837	BC048562	NM_001004192.1	NM_001004192.1		434439	52138533	NM_001004192.1	BC048562	NP_001004192.1	ILMN_2965600	007610687	S	370	TGAGCCAACAGCCGCCTCTGGAATCGTCCTACCAGACTGACTTCCGGTCA	9	+	108348097-108348146	9qF2	Mus musculus cDNA sequence BC048562 (BC048562), mRNA.				MGC58561	MGC58561
Mus musculus	RefSeq	ILMN_249837	ILMN_249837	BC048562	NM_001004192.1	NM_001004192.1		434439	52138533	NM_001004192.1	BC048562	NP_001004192.1	ILMN_2965595	001190523	S	614	GCTGCAGCACTACCTCCACGCCGGAGTTTCTGAGTGTTTAAACTGGTCCC	9	+	108348341-108348390	9qF2	Mus musculus cDNA sequence BC048562 (BC048562), mRNA.				MGC58561	MGC58561
Mus musculus	RefSeq	ILMN_212900	ILMN_212900	CLTA	NM_016760.2	NM_016760.2		12757	122939197	NM_016760.2	Clta	NP_058040.2	ILMN_1218950	004060491	S	915	GCTGTTCACGTAATTGGATTAATTATGTTGAGTTCTTTTGGACCAAACCT	4	+	44045499-44045548	4qB1	Mus musculus clathrin, light polypeptide (Lca) (Clta), transcript variant 3, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex [goid 30132] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AV026556	AV026556
Mus musculus	MEEBO	ILMN_215327	ILMN_215327	TCF23	scl27966.3.1_97	NM_053085.1			16716368	NM_053085.1	Tcf23		ILMN_2658168	006400168	S	3618	GTAGAATTGTGGACAGGCTGGGGCTATGTGTTTCGGGCCGTGTATTGCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223460	ILMN_253769	QPCT	NM_027455.2	NM_027455.2		70536	142353769	NM_027455.2	Qpct	NP_081731.1	ILMN_2764371	007160528	S	1769	TATAGTGGTAGTTTTATATGTGATATTATATAGTGTGTTATATAATATGT	17	+	79489428-79489477	17qE3	Mus musculus glutaminyl-peptide cyclotransferase (glutaminyl cyclase) (Qpct), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the reaction: L-glutaminyl-peptide = 5-oxoprolyl-peptide + NH3 [goid 16603] [evidence IEA]	5730422A13Rik	5730422A13Rik
Mus musculus	RefSeq	ILMN_211025	ILMN_211025	PSMD7	NM_010817.1	NM_010817.1		17463	6754723	NM_010817.1	Psmd7	NP_034947.1	ILMN_2630438	005290474	S	1532	CTTAGGGCTTGGGGTCCAAGGCCATGTATTGTTTACCTTCAAAGATACAA	8	-	110104298-110104347	8qD3	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Psmd7), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			Mov34; AW107203; Mov-34	Mov34; AW107203; Mov-34
Mus musculus	RefSeq	ILMN_211025	ILMN_211025	PSMD7	NM_010817.1	NM_010817.1		17463	6754723	NM_010817.1	Psmd7	NP_034947.1	ILMN_1220284	000290070	S	223	CCAGAAGCGGGTAGTTGGTGTGCTTTTGGGATCATGGCAAAAGAAAGTAC	8	-	110110548-110110597	8qD3	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Psmd7), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]			Mov34; AW107203; Mov-34	Mov34; AW107203; Mov-34
Mus musculus	RefSeq	ILMN_197174	ILMN_310664	LOC100041196	XM_001475947.1	XM_001475947.1		100041196	149248909	XM_001475947.1	LOC100041196	XP_001475997.1	ILMN_1240609	007400630	S	299	ATCAGATGGACGCACGACTGGACGCACTTTGGGAGAGCGTTGGGGACCCT	2	-	19351939-19351988	2qA3	PREDICTED: Mus musculus hypothetical protein LOC100041196 (LOC100041196), mRNA.					
Mus musculus	RefSeq	ILMN_192279	ILMN_252003	RUNX1	NM_009821.1	NM_009821.1		12394	6753297	NM_009821.1	Runx1	NP_033951.1	ILMN_2589107	006650687	S	4154	CCATGGCTACGGTTCAGATGTGCATCGTGTCACTGTAAATGTAATGGTAC	16	-	92604435-92604484	16qC4	Mus musculus runt related transcription factor 1 (Runx1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases angiogenesis [goid 45766] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Pebpa2b; AI462102; Pebp2a2; Cbfa2; AML1	Pebpa2b; AI462102; Pebp2a2; Cbfa2; AML1
Mus musculus	RefSeq	ILMN_248692	ILMN_248692	1700007K09RIK	NM_027037.2	NM_027037.2		69318	124378003	NM_027037.2	1700007K09Rik	NP_081313.1	ILMN_2834950	007040487	S	398	ACCATTGCTGTTGCGAGTTGCGGTCCCCTCCAGTGTTGTAATGTATGTGG	7	-	138469673-138469722	7qF3	Mus musculus RIKEN cDNA 1700007K09 gene (1700007K09Rik), mRNA.					
Mus musculus	RefSeq	ILMN_190361	ILMN_231776	1700084C01RIK	NM_001033185.2	NM_001033185.2		78465	142373100	NM_001033185.2	1700084C01Rik	NP_001028357.1	ILMN_2469494	004850551	S	386	GGCAAGAATGTGACAACATCTTTCGATCTCTTTTGAATTTCATGCCCCAC	1	+	171863204-171863246:171863773-171863779	1qH3	Mus musculus RIKEN cDNA 1700084C01 gene (1700084C01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197100	ILMN_231776	1700084C01RIK	NM_001033185.2	NM_001033185.2		78465	142373100	NM_001033185.2	1700084C01Rik	NP_001028357.1	ILMN_1229202	001740288	S	1137	CCTCGGGGACCCTGCCCTTTTGTTTGGTCTTCCTCCTAATAAACAAGGCC	1	+	171864481-171864530	1qH3	Mus musculus RIKEN cDNA 1700084C01 gene (1700084C01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_189660	ILMN_237436	LPP	NM_178665.4	NM_178665.4		210126	142382930	NM_178665.4	Lpp	NP_848780.2	ILMN_2766837	002600674	S	3697	TTACAGAAAGGTATAAATAATAATATAAAGGTCCCTCTATAGCTAACACC	16	+	24980852-24980901	16qB1	Mus musculus LIM domain containing preferred translocation partner in lipoma (Lpp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AA959454; D630048H16; AU024130; B130055L10Rik; C79715; 9430020K16Rik	AA959454; D630048H16; AU024130; B130055L10Rik; C79715; 9430020K16Rik
Mus musculus	RefSeq	ILMN_219578	ILMN_219578	MAP3K7IP1	NM_025609.2	NM_025609.2		66513	34328267	NM_025609.2	Map3k7ip1	NP_079885.2	ILMN_1245918	004860598	S	2860	GGGACAAAGGAGGTCCTCCCCAAGGAATGTGGTGCTGTTTGGTCTCTAGA	15	+	79992060-79992109	15qE1	Mus musculus mitogen-activated protein kinase kinase kinase 7 interacting protein 1 (Map3k7ip1), mRNA.		The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase [goid 185] [evidence IMP]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Increases the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19209] [evidence IMP]	2310012M03Rik; Tab1	2310012M03Rik; Tab1
Mus musculus	RefSeq	ILMN_219578	ILMN_219578	MAP3K7IP1	NM_025609.2	NM_025609.2		66513	34328267	NM_025609.2	Map3k7ip1	NP_079885.2	ILMN_2731482	001740128	S	1227	ATGCCTTCTCAGGGCCAGATGGTCAACGGCTCTCACAGTGCCTCCACTCT	15	+	79989261-79989310	15qE1	Mus musculus mitogen-activated protein kinase kinase kinase 7 interacting protein 1 (Map3k7ip1), mRNA.		The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase [goid 185] [evidence IMP]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Increases the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19209] [evidence IMP]	2310012M03Rik; Tab1	2310012M03Rik; Tab1
Mus musculus	RefSeq	ILMN_219578	ILMN_219578	MAP3K7IP1	NM_025609.2	NM_025609.2		66513	34328267	NM_025609.2	Map3k7ip1	NP_079885.2	ILMN_1233783	001470719	S	1925	CCTCTGGGTGGCTATCCCCTTTCCACCTTTCAGCCCAAACTCCTAGATCC	15	+	79991125-79991174	15qE1	Mus musculus mitogen-activated protein kinase kinase kinase 7 interacting protein 1 (Map3k7ip1), mRNA.		The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase [goid 185] [evidence IMP]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Increases the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19209] [evidence IMP]	2310012M03Rik; Tab1	2310012M03Rik; Tab1
Mus musculus	RefSeq	ILMN_219578	ILMN_219578	MAP3K7IP1	NM_025609.2	NM_025609.2		66513	34328267	NM_025609.2	Map3k7ip1	NP_079885.2	ILMN_2906042	000060215	S	2669	GGCCTGGTGGCAAAGGCCAATTCAGAGCACTTCTCAGACTCCATTTCCCT	15	+	79991869-79991918	15qE1	Mus musculus mitogen-activated protein kinase kinase kinase 7 interacting protein 1 (Map3k7ip1), mRNA.		The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase [goid 185] [evidence IMP]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Increases the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19209] [evidence IMP]	2310012M03Rik; Tab1	2310012M03Rik; Tab1
Mus musculus	RefSeq	ILMN_187321	ILMN_187321	ZFP287	NM_133208.2	NM_133208.2		170740	113865958	NM_133208.2	Zfp287	NP_573471.2	ILMN_2443102	000050204	S	3075	TCCTGACATTATAGGAAAGAGGGTAGATGCTTCGGGGCCTTTGCTTCATC	11	-	62526884-62526933	11qB2	Mus musculus zinc finger protein 287 (Zfp287), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42035] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Skat2; mszf16; B230333C16Rik; SKAT-2; Znf287; mszf74	Skat2; mszf16; B230333C16Rik; SKAT-2; Znf287; mszf74
Mus musculus	RefSeq	ILMN_200309	ILMN_200309	LOC386195	XM_359113.1	XM_359113.1			38081276	XM_359113.1	LOC386195		ILMN_1228114	006040612	S	1600	GGACAGGAAGTCTTTACCATGGGGTCAGAGGATGCAGCTAGGGCTAGGAG										
Mus musculus	RefSeq	ILMN_208981	ILMN_208981	MAPK8IP3	NM_013931.2	NM_013931.2		30957	142353174	NM_013931.2	Mapk8ip3	NP_038959.1	ILMN_1253744	005360411	S	1025	GAACAACAAGCAGGCCCGAGAGAAGCGCAATAGCCGTAACATGGAGGTCC	17	-	25064805-25064854	17qA3.3	Mus musculus mitogen-activated protein kinase 8 interacting protein 3 (Mapk8ip3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; The smooth endoplasmic reticulum (ER) has with no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER [goid 5790] [evidence IDA]; The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness [goid 30673] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IDA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IDA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IPI]; Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]	JSAP1a; BB120594; JIP-3; Syd2; D17Wsu15e; mKIAA1066; JSAP1d; JSAP1b; JSAP1; JSAP1c; Jip3	JSAP1a; BB120594; JIP-3; Syd2; D17Wsu15e; mKIAA1066; JSAP1d; JSAP1b; JSAP1; JSAP1c; Jip3
Mus musculus	Riken	ILMN_202886	ILMN_202886	4933439J20RIK	ri|4933439J20|PX00021H18|AK030267|2454					AK030267	4933439J20Rik		ILMN_1215818	000580291	S	2004	AGCTCTCGGTACAAACAGGCAGTCGGTAATGGGGGTCATTTCAGAGGCTG										
Mus musculus	RefSeq	ILMN_199476	ILMN_199476	LOC383541	XM_357114.1	XM_357114.1			38050370	XM_357114.1	LOC383541		ILMN_2535350	003890315	S	253	CTCAGAGTGGTCAAGAAGACGTGGTCTTTGGTGAACTCAGGGCTCAGATG										
Mus musculus	RefSeq	ILMN_217808	ILMN_217808	FGF23	NM_022657.3	NM_022657.3		64654	110625790	NM_022657.3	Fgf23	NP_073148.1	ILMN_2687816	006900142	S	821	TGGAGATGCTCGCGGGGGCGCGGGAGGCGCGGATAGGTGTCGCCCCTTTC	6	+	127030433-127030482	6qF3	Mus musculus fibroblast growth factor 23 (Fgf23), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IMP]; The regulation of the levels, transport, and metabolism of phosphate ions within a cell or between a cell and its external environment [goid 30643] [evidence IMP]	Interacting selectively with the fibroblast growth factor receptor (FGFR) [goid 5104] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence TAS]		
Mus musculus	RefSeq	ILMN_212031	ILMN_247154	SORT1	NM_019972.2	NM_019972.2		20661	34610210	NM_019972.2	Sort1	NP_064356.2	ILMN_1219717	002810468	S	6569	CAAAGACCTGTGTCAACCATACAGCAAAGGCAGACCCCATAACGACGTCC	3	+	108163329-108163378	3qF3	Mus musculus sortilin 1 (Sort1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ntr3; Ntsr3; AI852375; 2900053A11Rik	Ntr3; Ntsr3; AI852375; 2900053A11Rik
Mus musculus	RefSeq	ILMN_212031	ILMN_247154	SORT1	NM_019972.2	NM_019972.2		20661	34610210	NM_019972.2	Sort1	NP_064356.2	ILMN_2685772	006370600	S	2292	CGTGGGACTGATGCTTGTCACAGTCGTAGCAGGAGTCCTCATTGTGAAGA	3	+	108147775-108147824	3qF3	Mus musculus sortilin 1 (Sort1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ntr3; Ntsr3; AI852375; 2900053A11Rik	Ntr3; Ntsr3; AI852375; 2900053A11Rik
Mus musculus	RefSeq	ILMN_247154	ILMN_247154	SORT1	NM_019972.2	NM_019972.2		20661	34610210	NM_019972.2	Sort1	NP_064356.2	ILMN_3005873	001470091	S	6572	AGACCTGTGTCAACCATACAGCAAAGGCAGACCCCATAACGACGTCCCAC	3	+	108163332-108163381	3qF3	Mus musculus sortilin 1 (Sort1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ntr3; Ntsr3; AI852375; 2900053A11Rik	Ntr3; Ntsr3; AI852375; 2900053A11Rik
Mus musculus	RefSeq	ILMN_196560	ILMN_196560	CYP2A4	NM_009997.2	NM_009997.2		13086	116268117	NM_009997.2	Cyp2a4	NP_034127.2	ILMN_1250364	005290347	S	1606	CACTTCGTAGACTTGCAGAGGATATTTCAAAGGTAGCCAGAGAAGGGGGA	7	+	27099998-27100047	7qA3	Mus musculus cytochrome P450, family 2, subfamily a, polypeptide 4 (Cyp2a4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	AI893559; Cyp15a1; D7Ucla4	AI893559; Cyp15a1; D7Ucla4
Mus musculus	RefSeq	ILMN_223325	ILMN_223325	1700008F21RIK	NM_029292.1	NM_029292.1		75453	13386385	NM_029292.1	1700008F21Rik	NP_083568.1	ILMN_2944703	005870138	S	546	CAAAGGCTGAGAGATCCCGAGAGAGTAAAGTCTGCAACCAAATTAGAGCG	8	+	132031679-132031698:132049921-132049950	8qE2	Mus musculus RIKEN cDNA 1700008F21 gene (1700008F21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201522	ILMN_201522	SPEER4D	NM_025759.1	NM_025759.1		360220	13385225	NM_025759.1	Speer4d	NP_080035.1	ILMN_3051348	004900193	I	868	CCCTTTTCTCTTCAGACAACAACTCTTGGCAGAGTACTGAGGTGACTGCA	5	+	15135397-15135446	5qA2	Mus musculus spermatogenesis associated glutamate (E)-rich protein 4d (Speer4d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SPEER-4D; 4933431D05Rik	SPEER-4D; 4933431D05Rik
Mus musculus	MEEBO	ILMN_218119	ILMN_218119	BC034902	scl0228642.2_45	NM_177654.2			31343444	NM_177654.2	BC034902		ILMN_1214550	005310273	S	1978	CACCCAGCAGCTGTTGAAATGCATACCATGAGGCCCCACCTAAGACCAGC										
Mus musculus	RefSeq	ILMN_255002	ILMN_255002	EG384639	NM_001013781.1	NM_001013781.1		384639	62000653	NM_001013781.1	EG384639	NP_001013803.1	ILMN_2780186	006350209	S	1400	GCAAGCTCTTCCTCATGTACCTGGTCCAAATGCAGGTTATTGTGGGAGGC	7	+	68493368-68493417	7qD1	Mus musculus predicted gene, EG384639 (EG384639), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_212286	ILMN_212286	AP3D1	NM_007460.1	NM_007460.1		11776	6671564	NM_007460.1	Ap3d1	NP_031486.1	ILMN_2953301	006770403	S	4417	AGCTGTGGAGGGCTTAGTGCCTTGCAGTGGAGAGTGTGCATCCTGGGAGC	10	-	80169986-80170035	10qC1	Mus musculus adaptor-related protein complex 3, delta 1 subunit (Ap3d1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IMP]; The process by which an antigen-presenting cell expresses lipid antigen of exogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family [goid 48007] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation [goid 51138] [evidence IMP]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ap3d; mh; mocha; Bolvr; mBLVR1; AA407035	Ap3d; mh; mocha; Bolvr; mBLVR1; AA407035
Mus musculus	RefSeq	ILMN_222974	ILMN_222974	PCDHB7	NM_053132.2	NM_053132.2		93878	32189406	NM_053132.2	Pcdhb7	NP_444362.2	ILMN_2903796	001400575	S	2642	GGTCGAAGGACTCTCTCGCCACGCTCACCTAAGACCCTCAGAAAACTCAG	18	+	37503997-37504046	18qB3	Mus musculus protocadherin beta 7 (Pcdhb7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Pcdhb4B; PcdhbG	Pcdhb4B; PcdhbG
Mus musculus	RefSeq	ILMN_253941	ILMN_253941	OLFR1406	NM_146763.1	NM_146763.1		258758	22129324	NM_146763.1	Olfr1406	NP_666974.1	ILMN_2957081	005720372	S	734	CTGTGGTTGTGATCCACTATGGCTGTGCCTCTATTGCCTACTTCAAGCCC	1	-	175113780-175113829	1qH3	Mus musculus olfactory receptor 1406 (Olfr1406), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-5	MOR267-5
Mus musculus	RefSeq	ILMN_209046	ILMN_259285	1700080O16RIK	XM_914006.2	XM_914006.2		74279	94407217	XM_914006.2	1700080O16Rik	XP_919099.2	ILMN_1227435	004060670	S	1580	CTGACTGTGACTCAGGCTTTCTTGTTATGAAATGTTGCTACTTGTACTCC				XqA5	PREDICTED: Mus musculus RIKEN cDNA 1700080O16 gene (1700080O16Rik), mRNA.					
Mus musculus	Riken	ILMN_202778	ILMN_202778	4930520H13RIK	ri|4930520H13|PX00033C20|AK029741|3236					AK029741	4930520H13Rik		ILMN_1248085	001070750	S	2431	GCATGACTAAGACTTCCTAAAACCTGGCTCTAGTCTCACAGCCTGCAGTC										
Mus musculus	MEEBO	ILMN_217104	ILMN_217104	RAB11FIP2	scl52322.5.1_285	XM_129331.1			20890523	XM_129331.1	Rab11fip2		ILMN_2679139	000020121	S	1435	CCCCTCAGGCATTGGGAACAGTTGTCAGCCCTGTCCATACTCACAGGTAT										
Mus musculus	Riken	ILMN_203265	ILMN_203265	9330209C19RIK	ri|9330209C19|PX00107D02|AK034506|2248					AK034506	9330209C19Rik		ILMN_1225804	005910494	S	2090	GCTAAGCAGTTATCACAGGCAAGATAAGAACACCCTGGCCCCTTCTGCGG										
Mus musculus	RefSeq	ILMN_198021	ILMN_239439	EG666231	XR_001849.1	XR_001849.1		666231	94374979	XR_001849.1	EG666231		ILMN_1250660	000360370	S	1119	GGAGTGAGAATCATAGCCGAGCCAGGCAGCTTTCACGCTTGCAGTCAACA	5	+	96404061-96404110	5qE3	PREDICTED: Mus musculus predicted gene, EG666231 (EG666231), misc RNA.					
Mus musculus	RefSeq	ILMN_211839	ILMN_211839	PGAM1	NM_023418.2	NM_023418.2		18648	114326545	NM_023418.2	Pgam1	NP_075907.2	ILMN_1232278	005700349	S	1528	TCAGCACACAAAAGCAACTCTGAGGTTGCTAGTGACATTTGAAACAGTCC	19	+	41992851-41992900	19qC3	Mus musculus phosphoglycerate mutase 1 (Pgam1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IEA]; Catalysis of the reaction: 2,3-diphosphoglycerate + H2O = 3-phosphoglycerate + phosphate [goid 4083] [evidence IEA]; Catalysis of the reaction: 2-phospho-D-glycerate = 3-phospho-D-glycerate [goid 4619] [evidence IDA]; Catalysis of the reaction: 3-phospho-D-glyceroyl phosphate = 2,3-bisphospho-D-glycerate [goid 4082] [evidence IEA]	Pgam-1; 2310050F24Rik; MGC118049; MGC102422	Pgam-1; 2310050F24Rik; MGC118049; MGC102422
Mus musculus	RefSeq	ILMN_211839	ILMN_211839	PGAM1	NM_023418.2	NM_023418.2		18648	114326545	NM_023418.2	Pgam1	NP_075907.2	ILMN_2856157	005080491	S	1131	CTAGTCAGAATAACGCCTCTGGGGGTGCAGGTTCTCGGACCACATCGAGG	19	+	41992454-41992503	19qC3	Mus musculus phosphoglycerate mutase 1 (Pgam1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IEA]; Catalysis of the reaction: 2,3-diphosphoglycerate + H2O = 3-phosphoglycerate + phosphate [goid 4083] [evidence IEA]; Catalysis of the reaction: 2-phospho-D-glycerate = 3-phospho-D-glycerate [goid 4619] [evidence IDA]; Catalysis of the reaction: 3-phospho-D-glyceroyl phosphate = 2,3-bisphospho-D-glycerate [goid 4082] [evidence IEA]	Pgam-1; 2310050F24Rik; MGC118049; MGC102422	Pgam-1; 2310050F24Rik; MGC118049; MGC102422
Mus musculus	RefSeq	ILMN_214475	ILMN_214475	RBM12B	NM_028226.1	NM_028226.1		72397	33859715	NM_028226.1	Rbm12b	NP_082502.1	ILMN_1240675	002070754	S	2740	CATTACAGTATAATGAGCAAGGATTACCTATAGGAGAAGCCATTGTTGCT	4	+	12073549-12073598	4qA1	Mus musculus RNA binding motif protein 12B (Rbm12b), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	3000004N20Rik	3000004N20Rik
Mus musculus	RefSeq	ILMN_197788	ILMN_197788	LOC332860	XM_285784.2	XM_285784.2			38078119	XM_285784.2	LOC332860		ILMN_1220949	004010025	S	1560	TGCCAACCAGCTCCCCTTCAATGCATCTGTTTCAGTTCATTACCATCGGC										
Mus musculus	Riken	ILMN_204011	ILMN_204011	9830144J08RIK	ri|9830144J08|PX00118J08|AK036638|3877					AK036638	9830144J08Rik		ILMN_1253668	002760026	S	3631	GCACAGTGTCCACAGAGGTCAGAATAGGCCATCAGGTCCCCAGAACTAGA										
Mus musculus	MEEBO	ILMN_213129	ILMN_213129	HNRPF	scl098758.2_172				19527047	NM_133834	Hnrpf		ILMN_2771404	001990113	S	1913	TTCATTCTAGTTATATTTTCATTTAAAATCTTTAGGTTAAGTTTAAGCTT										
Mus musculus	RefSeq	ILMN_230843	ILMN_230843	MNT	NM_010813.2	NM_010813.2		17428	31543258	NM_010813.2	Mnt	NP_034943.2	ILMN_2965835	001500193	S	4166	AAGAAGGGCAGGGGATACCTGGAGGGGAGTTGGGTCACCACAGTCTCTCT	11	+	74658807-74658856	11qB5	Mus musculus max binding protein (Mnt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Rox	Rox
Mus musculus	RefSeq	ILMN_220466	ILMN_220466	CD24A	NM_009846.2	NM_009846.2		12484	83816954	NM_009846.2	Cd24a	NP_033976.1	ILMN_1237868	003390110	S	1471	TTCCAATTTCCTTGATATACACATACCTTCTAAAACCTAGACATTTCCTG	10	+	43303726-43303775	10qB2	Mus musculus CD24a antigen (Cd24a), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence ISS]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISO]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence ISO]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The portion of the plasma membrane surrounding a cilium [goid 60170] [evidence IDA]; The portion of the plasma membrane surrounding a microvillus [goid 31528] [evidence IDA]	The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IDA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IGI]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence ISS]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence ISS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence ISS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IDA]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IDA]; The morphological and physiological alterations undergone by the nucleus during apoptosis [goid 30262] [evidence IDA]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IDA]; Any process that activates or increases the rate or extent of resting T cell proliferation [goid 42103] [evidence IMP]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50768] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of resting T cell proliferation [goid 46014] [evidence IMP]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence ISS]; A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand [goid 1775] [evidence ISS]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; A phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 45730] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [evidence ISS]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43408] [evidence ISS]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IMP]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; Invagination of the axonal plasma membrane creating a membrane-bounded vesicle. Without this process the presynaptic terminal would swell up due to fusion of vesicle membranes during neurotransmitter release. The vesicles created may subsequently be used for neurotransmitter storage/release [goid 48488] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any process that modulates the frequency, rate or extent of B cell differentiation [goid 45577] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; Any process that modulates the frequency, rate, or extent of cell-cell adhesion mediated by integrin [goid 33632] [evidence IDA]; The attachment of a cell to a second cell of the identical type via adhesion molecules [goid 34109] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a T cell mediated immune response to tumor cell [goid 2842] [evidence IDA]; Any process that modulates the frequency, rate or extent of the cytokine and chemokine mediated signaling pathway [goid 1959] [evidence IMP]; The directed movement of a chemokine receptor out of a membrane raft [goid 32600] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics [goid 43627] [evidence ISS]; Any process that stops, prevents, or reduces the frequency, rate, or extent of production of transforming growth factor-beta3 [goid 32913] [evidence ISS]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments [goid 2329] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of cell-cell adhesion mediated by integrin [goid 33634] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of integrin activation [goid 33625] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of integrin activation [goid 33625] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of B cell apoptosis [goid 2904] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of cell adhesion mediated by integrin [goid 33630] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of cell adhesion mediated by integrin [goid 33630] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of an inflammatory response to an antigenic stimulus [goid 2863] [evidence IMP]; The movement of leukocytes within or between different tissues and organs of the body during an inflammatory response [goid 2523] [evidence IMP]; Any process that activates or increases the rate or extent of cell adhesion to another cell [goid 22409] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate, or extent of erythrocyte clearance [goid 34107] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell [goid 22407] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate, or extent of erythrocyte aggregation [goid 34119] [evidence IMP]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISS]; Interacting selectively with any carbohydrate [goid 30246] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [evidence ISS]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [evidence IDA]	Ly-52; HSA	Ly-52; HSA
Mus musculus	RefSeq	ILMN_210206	ILMN_210206	MOV10	NM_008619.1	NM_008619.1		17454	6678919	NM_008619.1	Mov10	NP_032645.1	ILMN_1249117	001090259	S	247	TGGACCTGGAGACAGATCGTGAGCGGCTGCGGACGATTTACAACCACGAC	3	-	104620864-104620913	3qF2.2	Mus musculus Moloney leukemia virus 10 (Mov10), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Mov-10; C77703	Mov-10; C77703
Mus musculus	RefSeq	ILMN_210206	ILMN_210206	MOV10	NM_008619.1	NM_008619.1		17454	6678919	NM_008619.1	Mov10	NP_032645.1	ILMN_1254962	006020612	S	242	TGGACTGGACCTGGAGACAGATCGTGAGCGGCTGCGGACGATTTACAACC	3	-	104620869-104620918	3qF2.2	Mus musculus Moloney leukemia virus 10 (Mov10), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Mov-10; C77703	Mov-10; C77703
Mus musculus	RefSeq	ILMN_210206	ILMN_210206	MOV10	NM_008619.1	NM_008619.1		17454	6678919	NM_008619.1	Mov10	NP_032645.1	ILMN_2915279	001770364	S	3067	TGAGCAAACTCAGCCCCTCTACCTCAGGGCCCCGCCGTCACCAGAATCTC	3	-	104598135-104598158:104598243-104598268	3qF2.2	Mus musculus Moloney leukemia virus 10 (Mov10), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Mov-10; C77703	Mov-10; C77703
Mus musculus	RefSeq	ILMN_221615	ILMN_221615	CAB39	NM_133781.3	NM_133781.3		12283	145301631	NM_133781.3	Cab39	NP_598542.2	ILMN_2737878	004900333	S	2215	AATGAGTCCTAAGGTTGCCATATCTATGAATGATACAGATTATGCTAAAT				1qC5	Mus musculus calcium binding protein 39 (Cab39), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]	AA960512; C78372; AA408805; 39kDa; MO25	AA960512; C78372; AA408805; 39kDa; MO25
Mus musculus	Riken	ILMN_204089	ILMN_204089	B130052F17RIK	ri|B130052F17|PX00158C20|AK045259|2394					AK045259	B130052F17Rik		ILMN_1229656	003450064	S	2164	GGGCCTGACCAATACTAAACAACACTCTGCCATGAAGCCACTCCTTCAGC										
Mus musculus	RefSeq	ILMN_186239	ILMN_250920	SMCR7L	NM_178719.4	NM_178719.4		239555	142347394	NM_178719.4	Smcr7l	NP_848834.2	ILMN_2603422	000780403	S	3818	TTATCATTTGTCACTGTGAATTTAGGAAAAGCAATGAATTTATTGCCTGT	15	+	80082573-80082622	15qE1	Mus musculus Smith-Magenis syndrome chromosome region, candidate 7-like (human) (Smcr7l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			A230016E22; AI452372	A230016E22; AI452372
Mus musculus	Riken	ILMN_203443	ILMN_203443	E130216C05RIK	ri|E130216C05|PX00092N04|AK087459|1156					AK087459	E130216C05Rik		ILMN_1237832	004640424	S	949	GGAGTTCAGGCCGCTGGAAGAGCCAGGATGTCGGATGTGGAACCCGTACT										
Mus musculus	RefSeq	ILMN_211673	ILMN_211673	GPR50	NM_010340.1	NM_010340.1		14765	6754059	NM_010340.1	Gpr50	NP_034470.1	ILMN_2618394	005570594	S	1527	CTGTTGACTATCTCGAACCTGCCACCACCAGCCACTCTGTGCTCACTGCT	X	+	68920754-68920803	XqA7.2	Mus musculus G-protein-coupled receptor 50 (Gpr50), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with melatonin, N-acetyl-5-methoxytryptamine, to initiate a change in cell activity. Melatonin is a neuroendocrine substance that stimulates the aggregation of melanosomes in melanophores, thus lightening the skin [goid 8502] [evidence IEA]	H9	H9
Mus musculus	RefSeq	ILMN_216379	ILMN_216379	AQP11	NM_175105.3	NM_175105.3		66333	142384133	NM_175105.3	Aqp11	NP_780314.1	ILMN_2670407	000010201	S	1175	CTGTGGAAGGTGTCTTAAGTTTTTACTACCTGGACTTCAAATTACTGTGA	7	-	104874986-104875035	7qE2	Mus musculus aquaporin 11 (Aqp11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that reduces the pH of the endosomal lumen, measured by the concentration of the hydrogen ion [goid 48388] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC144512; AI648923; MGC144511; 1700015P13Rik	MGC144512; AI648923; MGC144511; 1700015P13Rik
Mus musculus	RefSeq	ILMN_216379	ILMN_216379	AQP11	NM_175105.3	NM_175105.3		66333	142384133	NM_175105.3	Aqp11	NP_780314.1	ILMN_1225901	003440754	S	908	CCCAGCGCTGGCACTTTCTCTGCACTTTCCGTGCTTTGACGAACTCTTCT	7	-	104877519-104877568	7qE2	Mus musculus aquaporin 11 (Aqp11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that reduces the pH of the endosomal lumen, measured by the concentration of the hydrogen ion [goid 48388] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC144512; AI648923; MGC144511; 1700015P13Rik	MGC144512; AI648923; MGC144511; 1700015P13Rik
Mus musculus	RefSeq	ILMN_212245	ILMN_212245	FGA	NM_010196.2	NM_010196.2		14161	87239968	NM_010196.2	Fga	NP_034326.1	ILMN_1232567	004250021	S	1792	GCGAAGTGCTTACCAGGCACGCTGCACCCGTTTCCTAACCTCCTTTAGTG	3	+	82835972-82836021	3qE3	Mus musculus fibrinogen, alpha polypeptide (Fga), mRNA.	The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]		Fib	Fib
Mus musculus	RefSeq	ILMN_220379	ILMN_220379	GDPD4	NM_177696.2	NM_177696.2		233537	31343271	NM_177696.2	Gdpd4	NP_808364.1	ILMN_2721310	004390072	S	2997	TGGGGTTTGCAATTCACGGTCTCATTTCACTGAATAAATAGCCTTTGGCC	7	+	105198117-105198166	7qE2	Mus musculus glycerophosphodiester phosphodiesterase domain containing 4 (Gdpd4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	4921513O04	4921513O04
Mus musculus	RefSeq	ILMN_213927	ILMN_213927	PTPRT	NM_021464.3	NM_021464.3		19281	146135055	NM_021464.3	Ptprt	NP_067439.1	ILMN_1239565	007380148	S	6380	GAGGGACACAGAATCCAATAAGGTACACATCTTGCCCTTCAGGCCCACTG				2qH2	Mus musculus protein tyrosine phosphatase, receptor type, T (Ptprt), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	RPTP-rfo; RPTPrho; mKIAA0283; KIAA0283	RPTP-rfo; RPTPrho; mKIAA0283; KIAA0283
Mus musculus	RefSeq	ILMN_215663	ILMN_234389	EG244911	XM_001004252.1	XM_001004252.1		244911	94385774	XM_001004252.1	EG244911	XP_001004252.1	ILMN_1235361	001850494	S	1179	CTTGACAGTGGCTTATCCCCGGGACACACACAACAGCCTTTTGGCTCTGG				9qC	PREDICTED: Mus musculus predicted gene, EG244911, transcript variant 2 (EG244911), mRNA.					
Mus musculus	RefSeq	ILMN_196985	ILMN_231969	LOC217647	XR_003375.1	XR_003375.1		217647	94394064	XR_003375.1	LOC217647		ILMN_1245793	003520086	S	215	ACAGGCTCAAAGTATCTCTTATCGTTATCCAGTTCACTCAGGCCCTGGAC				12qC1	PREDICTED: Mus musculus similar to 60S ribosomal protein L7a (LOC217647), mRNA.					
Mus musculus	RefSeq	ILMN_193933	ILMN_237570	KLHDC4	NM_145605.1	NM_145605.1		234825	21704209	NM_145605.1	Klhdc4	NP_663580.1	ILMN_2602115	001500546	S	511	TTGCATCTCCCGATGGCGAGCAGTTCTACCATTACAAGGACCTCTGGGTC	8	-	124337641-124337690	8qE1	Mus musculus kelch domain containing 4 (Klhdc4), mRNA.				MGC19372; G430025P05Rik; BC012312; AV352552; AA408426	MGC19372; G430025P05Rik; BC012312; AV352552; AA408426
Mus musculus	RefSeq	ILMN_193933	ILMN_237570	KLHDC4	NM_145605.1	NM_145605.1		234825	21704209	NM_145605.1	Klhdc4	NP_663580.1	ILMN_2740710	006860102	S	1973	CACGCGGAACGAGGGTTAGAGTGGGATGTGAATTTGAGGCCCACAGGCTG	8	-	124320268-124320317	8qE1	Mus musculus kelch domain containing 4 (Klhdc4), mRNA.				MGC19372; G430025P05Rik; BC012312; AV352552; AA408426	MGC19372; G430025P05Rik; BC012312; AV352552; AA408426
Mus musculus	RefSeq	ILMN_237570	ILMN_237570	KLHDC4	NM_145605.1	NM_145605.1		234825	21704209	NM_145605.1	Klhdc4	NP_663580.1	ILMN_2856166	006060154	S	1920	TTGGGTGCCCACAGTCTGACGGGGGCTAGCCTGACTTCACAGTGGCTTCT	8	-	124320321-124320370	8qE1	Mus musculus kelch domain containing 4 (Klhdc4), mRNA.				MGC19372; G430025P05Rik; BC012312; AV352552; AA408426	MGC19372; G430025P05Rik; BC012312; AV352552; AA408426
Mus musculus	RefSeq	ILMN_220899	ILMN_220899	ERCC4	NM_015769.1	NM_015769.1		50505	7657063	NM_015769.1	Ercc4	NP_056584.1	ILMN_1259904	000130360	S	3242	TGCACAGGGCTTGGTAGGCCTGAGACAGGACTGCTGTTGCTTCTTCCCCA	16	+	13126544-13126593	16qA1	Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 4 (Ercc4), mRNA.	Any complex formed of proteins that act in nucleotide-excision repair [goid 109] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISO]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI606920; Xpf	AI606920; Xpf
Mus musculus	RefSeq	ILMN_220899	ILMN_220899	ERCC4	NM_015769.1	NM_015769.1		50505	7657063	NM_015769.1	Ercc4	NP_056584.1	ILMN_2728866	002650553	S	3376	GAATTAATTGCTTACGGACAAGATTGGATGAGGTAATAAAGGGCTCCTCA	16	+	13126579-13126610:13127648-13127665	16qA1	Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 4 (Ercc4), mRNA.	Any complex formed of proteins that act in nucleotide-excision repair [goid 109] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence ISO]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI606920; Xpf	AI606920; Xpf
Mus musculus	MEEBO	ILMN_216118	ILMN_216118	ACAT3	scl0224530.9_22	NM_153151.1			23346598	NM_153151.1	Acat3		ILMN_1216631	006590465	S	73	CTGTGCAGACGCCAGGGGAGAGCAACAGGATGAACACAAGATCCGACCCA								Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210313	ILMN_320956	2810433D01RIK	XM_001473180.1	XM_001473180.1		77132	149262650	XM_001473180.1	2810433D01Rik	XP_001473230.1	ILMN_1227481	003830543	S	223	GTGGGACACAAGAGGAACAACAGACCAAGACCCTTGAACCTCCCACAGAG				11qE1	PREDICTED: Mus musculus RIKEN cDNA 2810433D01 gene (2810433D01Rik), mRNA.					
Mus musculus	Riken	ILMN_203295	ILMN_203295	TRIM27	ri|C330022A02|PX00076N17|AK049314|1750					AK049314	Trim27		ILMN_2556209	002030132	S	1252	TGAACGCCTCGAACTCGCTCTGACCCAGGATACCAAGCCAGACAGTCACT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISO]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence ISO]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any epigenetic process that stops, prevents or reduces the rate of gene expression [goid 45814] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISO]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_233452	ILMN_233452	UGCG	NM_011673.2	NM_011673.2		22234	31543924	NM_011673.2	Ugcg	NP_035803.1	ILMN_2840091	001230564	S	3268	GTCGGTTTGTTTAGTGGAGTTTGGTGGATGCCCTTTGCACTGCTGAAGTG	4	+	59316436-59316485	4qB3	Mus musculus UDP-glucose ceramide glucosyltransferase (Ugcg), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine [goid 8120] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ugcgl; AU043821; Epcs21; GlcT-1; C80537	Ugcgl; AU043821; Epcs21; GlcT-1; C80537
Mus musculus	MEEBO	ILMN_210536	ILMN_210536	TGFBR3	scl26267.18_317				47271510	NM_011578	Tgfbr3		ILMN_2606601	004390129	S	3751	GAGACGACCACTTCCTCCTTTAAAATGTCCTATGCTTCCAGAGTCGGAAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; A second wave of blood cell production that, in vertebrates, generates long-term hemopoietic stem cells that continously provide erythroid, myeloid and lymphoid lineages throughout adulthood [goid 60216] [evidence IMP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IMP]; The expansion of a cardiac muscle cell population by cell division [goid 60038] [evidence IMP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any glycan (polysaccharide) containing a substantial proportion of aminomonosaccharide residues [goid 5539] [evidence IDA]; Interacting selectively with TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types [goid 50431] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IPI]		
Mus musculus	RefSeq	ILMN_197464	ILMN_197464	LOC380899	XM_354813.1	XM_354813.1			38076092	XM_354813.1	LOC380899		ILMN_1225678	006520634	S	406	GCCTGGCCCTTGGAAGCTGCACTGTGGCTTTCTTGGCAAAGAATCTGCCC										
Mus musculus	RefSeq	ILMN_197586	ILMN_197586	LOC229571	XM_143394.2	XM_143394.2			38076700	XM_143394.2	LOC229571		ILMN_2528649	005550327	S	776	TGCTTCCGAGGTCTCTAAGACTTCAGGGTGGATGTCAATGAGGGAGTCAC										
Mus musculus	RefSeq	ILMN_223908	ILMN_245249	FBXL4	NM_172988.3	NM_172988.3		269514	146198581	NM_172988.3	Fbxl4	NP_766576.1	ILMN_1256720	000020767	S	2405	TTAATCAGTAATTGTATGTTAAAGGAATAATATGGAAATATTCTAATTTA				4qA3	Mus musculus F-box and leucine-rich repeat protein 4 (Fbxl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4732456I21; FBL4; FBL5; AI836810	4732456I21; FBL4; FBL5; AI836810
Mus musculus	MEEBO	ILMN_224162	ILMN_224162	MYOM2	scl34033.37.1_91				6678995	NM_008664	Myom2		ILMN_1238982	007320553	S	4767	GCATGTGGACTGAGGCTCAGATGGTCCTAGCATGTGGTAGTCTGGATAGT						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence TAS]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IPI]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]		
Mus musculus	RefSeq	ILMN_213685	ILMN_213685	OLFR8	NM_207201.1	NM_207201.1		18372	46402163	NM_207201.1	Olfr8	NP_997084.1	ILMN_1223135	002320722	S	604	CTTGTACCTGTTCTATTGGCAGTCATTTCCTTCAGTAGTATCCTTTACTC	10	+	78418555-78418604	10qC1	Mus musculus olfactory receptor 8 (Olfr8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR139-5P	MOR139-5P
Mus musculus	RefSeq	ILMN_212919	ILMN_212919	F3	NM_010171.2	NM_010171.2		14066	31560591	NM_010171.2	F3	NP_034301.2	ILMN_2892006	002070059	S	1239	GGACGAACGGAAACCGTACAAACTGGTTAACACTACAGCGCCTTTTGCAC	3	+	121437333-121437382	3qG1	Mus musculus coagulation factor III (F3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence TAS]		TF; Cf3; CD142; AA409063; Cf-3	TF; Cf3; CD142; AA409063; Cf-3
Mus musculus	RefSeq	ILMN_211182	ILMN_252040	LOC633936	XM_908491.2	XM_908491.2		633936	94397451	XM_908491.2	LOC633936	XP_913584.1	ILMN_2613364	000160598	S	1375	CCAGAACCAGGAAATCTTAGAGGTCTGTCATAATTATGTCGGTTCTCACA					PREDICTED: Mus musculus similar to T-cell receptor alpha chain V region PY14 precursor (LOC633936), mRNA.					
Mus musculus	Riken	ILMN_204748	ILMN_204748	B930053K13RIK	ri|B930053K13|PX00164D15|AK047370|746					AK047370	B930053K13Rik		ILMN_1248526	007320403	S	505	TGCAGCACAGGTATGACCGACACGGCTGCCAGAGAGAAACACAGCTAGGG										
Mus musculus	RefSeq	ILMN_223768	ILMN_317981	1700010B08RIK	XM_001479037.1	XM_001479037.1		75485	149250452	XM_001479037.1	1700010B08Rik	XP_001479087.1	ILMN_2768872	001470220	S	768	CCACGATGTGTGTTGTTAGCTCCTGATGGGATGGTGTTTGCGGCCTCTCT				2qH4	PREDICTED: Mus musculus RIKEN cDNA 1700010B08 gene (1700010B08Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213781	ILMN_213781	NUDT3	NM_019837.2	NM_019837.2		56409	133892043	NM_019837.2	Nudt3	NP_062811.1	ILMN_2640718	000150091	S	2085	GGCATTGCCTATGTTGAAACGTAGCCAAGATGTGAATTGAAAATAGTACT	17	-	27716372-27716421	17qA3.3	Mus musculus nudix (nucleotide diphosphate linked moiety X)-type motif 3 (Nudt3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		Dipp; 1110011B09Rik; AA960325	Dipp; 1110011B09Rik; AA960325
Mus musculus	MEEBO	ILMN_190861	ILMN_190861	4930408O17RIK	scl42827.2.1_204						4930408O17Rik		ILMN_1243715	005360400	S	1	CTGGAAGATAAGGTGCCCCTGACATTAGGAGATTGCCTATAATATGCAAG										
Mus musculus	Riken	ILMN_206878	ILMN_206878	D930048C11RIK	ri|D930048C11|PX00204A14|AK086726|897					AK086726	D930048C11Rik		ILMN_1222542	003130315	S	592	GCTGTGATCTGAGAAGCCCCATCTGGTTCAGGGGTCCTGGGTGACATCTG										
Mus musculus	MEEBO	ILMN_188628	ILMN_188628	AP3M1	scl45838.10_54				20270042	NM_018829	Ap3m1		ILMN_2454307	004570386	S	7	ACACTGGTGGTCTCTACTAAAATTAGGGTGTCTCTAGCCAGGAGGTGACC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196470	ILMN_247534	LOC627912	XM_892614.2	XM_892614.2		627912	94401717	XM_892614.2	LOC627912	XP_897707.1	ILMN_1257781	007000129	S	444	GCAAGGAGATCCACGAGCTGCAAAACAAGGTGGACCGTACTGCGGAGGAG	17	+	21179173-21179222	17qA3.2	PREDICTED: Mus musculus similar to l-Afadin (LOC627912), mRNA.					
Mus musculus	RefSeq	ILMN_211853	ILMN_211853	1810055E12RIK	NM_026437.1	NM_026437.1		67894	13385933	NM_026437.1	1810055E12Rik	NP_080713.1	ILMN_2805697	006580148	S	2083	AAGGCCACCTTTCTTCAGTATAGTTGCAGAGCATTCAAACCTTACCAGGA	19	+	60890666-60890715	19qD3	Mus musculus RIKEN cDNA 1810055E12 gene (1810055E12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216291	ILMN_327634	PHXR5	XR_035722.1	XR_035722.1		18690	149258176	XR_035722.1	Phxr5		ILMN_2669458	006350431	S	277	ACAGCCAGAGCCACGGTCACAGCCAGAGTGACAGGCACAGGAACAGGAAC	7	-	116985215-116985264	7qF1	PREDICTED: Mus musculus per-hexamer repeat gene 5 (Phxr5), misc RNA.					
Mus musculus	RefSeq	ILMN_216291	ILMN_327634	PHXR5	XR_035722.1	XR_035722.1		18690	149258176	XR_035722.1	Phxr5		ILMN_2728916	006330341	S	137	AGGTGGGTACAGCCTACACAGAGGTCAGAAAAACAACCACGGGGACAGCC	7	-	116985355-116985404	7qF1	PREDICTED: Mus musculus per-hexamer repeat gene 5 (Phxr5), misc RNA.					
Mus musculus	RefSeq	ILMN_216291	ILMN_327634	PHXR5	XR_035722.1	XR_035722.1		18690	149258176	XR_035722.1	Phxr5		ILMN_2712756	000460615	S	132	AAGTGAGGTGGGTACAGCCTACACAGAGGTCAGAAAAACAACCACGGGGA	7	-	116985360-116985409	7qF1	PREDICTED: Mus musculus per-hexamer repeat gene 5 (Phxr5), misc RNA.					
Mus musculus	MEEBO	ILMN_191313	ILMN_191313	1700074A11RIK	scl3939.1.1_38						1700074A11Rik		ILMN_1245601	000130377	S	3	CCTGCCTGATTGGTCAGTCACTAGGTGGTCTCCGAGCATATCCCGGCCTA										
Mus musculus	RefSeq	ILMN_213666	ILMN_213666	TMED2	NM_019770.2	NM_019770.2		56334	55742882	NM_019770.2	Tmed2	NP_062744.1	ILMN_1231873	007050746	S	530	CCGGGAGAGAATACACAGAGCCATCAATGACAACACAAACAGCAGAGTGG	5	+	124996990-124997012:124999090-124999116	5qF	Mus musculus transmembrane emp24 domain trafficking protein 2 (Tmed2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rnp24; 1810020N21Rik; Sid394; MGC102446; 1110032D12Rik	Rnp24; 1810020N21Rik; Sid394; MGC102446; 1110032D12Rik
Mus musculus	RefSeq	ILMN_222982	ILMN_222982	H3F3A	NM_008210.2	NM_008210.2		15078	31982294	NM_008210.2	H3f3a	NP_032236.1	ILMN_3145213	003360669	A	286	GGCCTGGTACTGTGGCCCTCCGTGAAATCAGACGCTATCAGAAGTCCACT	1	-	182646894-182646943	1qH4	Mus musculus H3 histone, family 3A (H3f3a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1740] [evidence IDA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H3.3A; MGC102150	H3.3A; MGC102150
Mus musculus	RefSeq	ILMN_222982	ILMN_222982	H3F3A	NM_008210.2	NM_008210.2		15078	31982294	NM_008210.2	H3f3a	NP_032236.1	ILMN_3066986	006380711	I	19	GAAAGCCTCGGTGTCAGCCATCTTTCAATTGTGTTCGCAGCCTTCGCCGC	1	-	182650210-182650259	1qH4	Mus musculus H3 histone, family 3A (H3f3a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1740] [evidence IDA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H3.3A; MGC102150	H3.3A; MGC102150
Mus musculus	RefSeq	ILMN_214212	ILMN_242941	TACSTD1	NM_008532.2	NM_008532.2		17075	112293274	NM_008532.2	Tacstd1	NP_032558.2	ILMN_1240539	004880164	S	1539	CATTTGTAACAGTGAAATTTGTACTCGTAAATACAAGCAGCTGGACACCG	17	+	88049945-88049994	17qE4	Mus musculus tumor-associated calcium signal transducer 1 (Tacstd1), mRNA.				TROP1; gp40; EpCAM; Tacsd1; Ep-CAM; Ly74; EGP; GA733-2; Egp314	TROP1; gp40; EpCAM; Tacsd1; Ep-CAM; Ly74; EGP; GA733-2; Egp314
Mus musculus	RefSeq	ILMN_214285	ILMN_214285	SLC13A2	NM_022411.3	NM_022411.3		20500	146135074	NM_022411.3	Slc13a2	NP_071856.1	ILMN_2646369	002360082	S	1911	TCGTGTGTTTGCCTACATCCTGTATGTGTGCTCTCCGGTGAAGAGGAAGA				11qB5	Mus musculus solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 (Slc13a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Nadc1; mNaDC-1	Nadc1; mNaDC-1
Mus musculus	RefSeq	ILMN_192934	ILMN_240657	RABGAP1L	NM_001038621.2	NM_001038621.2		29809	141801907	NM_001038621.2	Rabgap1l	NP_001033710.1	ILMN_1246950	006400706	S	1892	TGGAAATGGAGGGCCAATAGCTGTGGAGTAGATGGACTACTGCACTCTAG	1	-	162153701-162153750	1qH2.1	Mus musculus RAB GTPase activating protein 1-like (Rabgap1l), transcript variant 2, mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the frequency, rate or extent of any process by which a protein is transported to, or maintained in, a specific location [goid 32880] [evidence ISO]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence ISO]	mKIAA0471; HHL; 5830411O09Rik; 8430421H08Rik; 9630005B12Rik; AW049894; Hh1	mKIAA0471; HHL; 5830411O09Rik; 8430421H08Rik; 9630005B12Rik; AW049894; Hh1
Mus musculus	RefSeq	ILMN_222487	ILMN_222487	ACOT9	NM_019736.2	NM_019736.2		56360	31980997	NM_019736.2	Acot9	NP_062710.2	ILMN_2750225	000130669	S	1564	TCCTCCATAGAGGGGGCTATATTTCAAGTTTTTAGAATGATCGGAAGAGC	X	+	151732076-151732125	XqF3	Mus musculus acyl-CoA thioesterase 9 (Acot9), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IDA]	MT-ACT48; Acate2; C76421; 0610041P13Rik; p48; U8	MT-ACT48; Acate2; C76421; 0610041P13Rik; p48; U8
Mus musculus	RefSeq	ILMN_218813	ILMN_218813	PLA2G2D	NM_011109.2	NM_011109.2		18782	118130231	NM_011109.2	Pla2g2d	NP_035239.1	ILMN_2700514	006380274	S	1439	CCATATGAACATGGAAGGGGGACTAGGGTTTGAGGGATAGCTTTGCTGAG	4	+	138337233-138337282	4qD3	Mus musculus phospholipase A2, group IID (Pla2g2d), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]	mGIID; Splash; MGC130437	mGIID; Splash; MGC130437
Mus musculus	Riken	ILMN_204434	ILMN_204434	SP100	ri|A630057M18|PX00146J05|AK042095|1409					AK042095	Sp100		ILMN_1216849	006280221	S	1126	GGATTCCTAAGAAGTGGATCAGGAGGATTAGGACGCTCAGCCTTGGCCCA						A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_239547	ILMN_239547	TMEM151A	NM_001001885.1	NM_001001885.1		381199	49457864	NM_001001885.1	Tmem151a	NP_001001885.1	ILMN_2881686	005290692	S	3619	GGCAGTGACCCCAGCCAAAGGCAACATTCTACACTCCCTTGCATGGATAG	19	-	5079613-5079662	19qA	Mus musculus transmembrane protein 151A (Tmem151a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm961; AW125688	Gm961; AW125688
Mus musculus	RefSeq	ILMN_201384	ILMN_201384	LOC385074	XM_358034.1	XM_358034.1			38093437	XM_358034.1	LOC385074		ILMN_2542110	006060022	S	179	TTGATGAAGACGAGCTGGCGGAGGAGACAGGCGACATCACCCAGAGCTAC										
Mus musculus	RefSeq	ILMN_210189	ILMN_210189	TCTN3	NM_026260.2	NM_026260.2		67590	31541974	NM_026260.2	Tctn3	NP_080536.2	ILMN_2932474	000780324	S	2442	GCCACACCCTTTACCCAGACCTGAGTTAGAAAAGTAGTTCTTTCTACTCG	19	-	40671169-40671218	19qC3	Mus musculus tectonic family member 3 (Tctn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Tect3; AI197391	Tect3; AI197391
Mus musculus	RefSeq	ILMN_210189	ILMN_210189	TCTN3	NM_026260.2	NM_026260.2		67590	31541974	NM_026260.2	Tctn3	NP_080536.2	ILMN_1224799	005570152	S	1267	TGGGCTTTGCTCTGCTAAGAGACACGCAGTACAGTTTGGAGTGAACGCAG	19	-	40680212-40680261	19qC3	Mus musculus tectonic family member 3 (Tctn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Tect3; AI197391	Tect3; AI197391
Mus musculus	RefSeq	ILMN_210189	ILMN_210189	TCTN3	NM_026260.2	NM_026260.2		67590	31541974	NM_026260.2	Tctn3	NP_080536.2	ILMN_1241561	004610390	S	2614	ATGTCCAGTAGCGTGGCAGAAGTTGACACCTCATGATAGACACCCTGAGG	19	-	40670997-40671046	19qC3	Mus musculus tectonic family member 3 (Tctn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Tect3; AI197391	Tect3; AI197391
Mus musculus	RefSeq	ILMN_221155	ILMN_221155	LOC625758	XM_132900.5	XM_132900.5		625758	94378154	XM_132900.5	LOC625758	XP_132900.2	ILMN_1227470	003360397	S	293	GACAGCTTGGAAGTCCAGGATCACCAGAGTGGAAATGAACAAGCAGGAGG	6	+	131440462-131440511	6qF3	PREDICTED: Mus musculus similar to M199.5 (LOC625758), mRNA.					
Mus musculus	MEEBO	ILMN_224234	ILMN_224234	CSAD	scl0246277.1_158				21450350	NM_144942	Csad		ILMN_2777059	003990626	S	2130	GTCAGCAGTTTTCCCTGGAACGGGATATTAGGTTATTCCCAAATCAACCT						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways involving taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats [goid 19530] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including taurine [goid 19452] [evidence TAS]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: 3-sulfino-L-alanine = hypotaurine + CO2 [goid 4782] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence TAS]		
Mus musculus	RefSeq	ILMN_216361	ILMN_216361	SEC11C	NM_025468.2	NM_025468.2		66286	141802396	NM_025468.2	Sec11c	NP_079744.1	ILMN_1221592	005130497	S	635	GCAGTTCCTGGGACCAGACCGAAATGAGTTCTGTTGAAAAAGAGAAAAGC	18	+	65977176-65977225	18qE1	Mus musculus SEC11 homolog C (S. cerevisiae) (Sec11c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	1810029G24Rik; Sec11l3	1810029G24Rik; Sec11l3
Mus musculus	RefSeq	ILMN_200641	ILMN_227181	NOTO	NM_001007472.1	NM_001007472.1		384452	58372169	NM_001007472.1	Noto	NP_001007473.1	ILMN_1225333	007610524	S	480	CTTCGGGACCACGGGACCGAGAGACACACAAAGAGGGTTCGCACAACGTT	6	+	85373948-85373997	6qC3	Mus musculus notochord homolog (Xenopus laevis) (Noto), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column [goid 30903] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MmNot; Not; tc; Flh	MmNot; Not; tc; Flh
Mus musculus	RefSeq	ILMN_227181	ILMN_227181	NOTO	NM_001007472.1	NM_001007472.1		384452	58372169	NM_001007472.1	Noto	NP_001007473.1	ILMN_2833082	007550082	S	280	TGTCGCAGTACGGGGTCCTGCCCTGGGTGTGCTCCACAGGGTCTTGGCTG	6	+	85372705-85372754	6qC3	Mus musculus notochord homolog (Xenopus laevis) (Noto), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column [goid 30903] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MmNot; Not; tc; Flh	MmNot; Not; tc; Flh
Mus musculus	RefSeq	ILMN_196494	ILMN_227181	NOTO	NM_001007472.1	NM_001007472.1		384452	58372169	NM_001007472.1	Noto	NP_001007473.1	ILMN_1237300	006450523	S	723	CCCTCCAGCAGCTCAGATGGCAACATCCAGAGTGAAGATGCTGAGTTGGG	6	+	85374007-85374056	6qC3	Mus musculus notochord homolog (Xenopus laevis) (Noto), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IMP]; The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column [goid 30903] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MmNot; Not; tc; Flh	MmNot; Not; tc; Flh
Mus musculus	RefSeq	ILMN_200242	ILMN_231952	VGF	NM_001039385.1	NM_001039385.1		381677	86476053	NM_001039385.1	Vgf	NP_001034474.1	ILMN_1232310	005860564	S	39	AGCTTCTAGGACGCCAGCCCTCGACCATCGCTCATACTCCAGCCACGGAA	5	+	137506203-137506252	5qG2	Mus musculus VGF nerve growth factor inducible (Vgf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IDA]; The physiological process by which dietary excess is sensed by the central nervous system and results in a reduction in food intake and increased energy expenditure [goid 2021] [evidence IDA]; The physiological process by which dietary excess is sensed by the central nervous system and results in a reduction in food intake and increased energy expenditure [goid 2021] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32868] [evidence IMP]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [evidence IMP]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [evidence IGI]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IMP]	Gm1052	Gm1052
Mus musculus	RefSeq	ILMN_231952	ILMN_231952	VGF	NM_001039385.1	NM_001039385.1		381677	86476053	NM_001039385.1	Vgf	NP_001034474.1	ILMN_2925923	001230196	S	2214	TGTCAGACTTCCCTGGGGTCTGCAGTCTAGAACACACAAAACTCGCAGGC	5	+	137508882-137508931	5qG2	Mus musculus VGF nerve growth factor inducible (Vgf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IDA]; The physiological process by which dietary excess is sensed by the central nervous system and results in a reduction in food intake and increased energy expenditure [goid 2021] [evidence IDA]; The physiological process by which dietary excess is sensed by the central nervous system and results in a reduction in food intake and increased energy expenditure [goid 2021] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32868] [evidence IMP]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [evidence IMP]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [evidence IGI]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IMP]	Gm1052	Gm1052
Mus musculus	Riken	ILMN_206680	ILMN_206680	A930038I05RIK	ri|A930038I05|PX00316F08|AK080750|1801					AK080750	A930038I05Rik		ILMN_2581896	002370411	S	77	GCCTCCTGGGGGAGCTGTTTGAAAAGCGGTACACGAGTTACCCTCTGAGG										
Mus musculus	RefSeq	ILMN_219119	ILMN_258239	UGT1A7C	NM_201642.4	NM_201642.4		394432	145699124	NM_201642.4	Ugt1a7c	NP_964004.1	ILMN_1221348	000650554	S	726	GACTTTCAAGGAAAGAACTCGGAACCTTTTGGCCTACATGGGGGAGCGTG				1qD	Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A7C (Ugt1a7c), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	Ugt1a10; A10'; A13	Ugt1a10; A10'; A13
Mus musculus	RefSeq	ILMN_219119	ILMN_258239	UGT1A7C	NM_201642.4	NM_201642.4		394432	145699124	NM_201642.4	Ugt1a7c	NP_964004.1	ILMN_1225921	004060044	S	740	GAACTCGGAACCTTTTGGCCTACATGGGGGAGCGTGCATTTTGTCATAAG				1qD	Mus musculus UDP glucuronosyltransferase 1 family, polypeptide A7C (Ugt1a7c), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	Ugt1a10; A10'; A13	Ugt1a10; A10'; A13
Mus musculus	RefSeq	ILMN_212475	ILMN_212475	PCIF1	NM_146129.3	NM_146129.3		228866	142379259	NM_146129.3	Pcif1	NP_666241.1	ILMN_2626864	006510086	S	2555	TCTGCCAGGGATCCCCCTCCCTGCTCTCACCCTTTCCGATTCACCAAGTC	2	+	164716740-164716789	2qH3	Mus musculus PDX1 C-terminal inhibiting factor 1 (Pcif1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310022K11Rik; C20orf67; RP23-61O3.7; PCIF1; MGC25976	2310022K11Rik; C20orf67; RP23-61O3.7; PCIF1; MGC25976
Mus musculus	RefSeq	ILMN_211560	ILMN_211560	HDGFRP2	NM_008233.2	NM_008233.2		15193	142375363	NM_008233.2	Hdgfrp2	NP_032259.1	ILMN_2617112	006620692	S	2154	CAGGGAAGTGCTGCGCTGTTTGTATTTGTGGTCTGGGCTTTTCTGCCTAG	17	+	56239922-56239971	17qD	Mus musculus hepatoma-derived growth factor, related protein 2 (Hdgfrp2), mRNA.				HRP-2	HRP-2
Mus musculus	RefSeq	ILMN_209109	ILMN_209109	NIPSNAP3A	NM_025623.2	NM_025623.2		66536	133892409	NM_025623.2	Nipsnap3a	NP_079899.1	ILMN_2592629	007040670	S	175	TGAATTCCGCACCTATTTTCTCAAGCCCTCAAAGACAAATGAGTTCCTGG	4	+	53027937-53027986	4qB2	Mus musculus nipsnap homolog 3A (C. elegans) (Nipsnap3a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			Nipsnap3b; 2700063N13Rik	Nipsnap3b; 2700063N13Rik
Mus musculus	RefSeq	ILMN_209109	ILMN_209109	NIPSNAP3A	NM_025623.2	NM_025623.2		66536	133892409	NM_025623.2	Nipsnap3a	NP_079899.1	ILMN_1247602	000630162	S	1317	ATTAAGTCAAAATTGGAAAATAATATATCCTTGAGACTTGGTGTATAATA	4	+	53034741-53034790	4qB2	Mus musculus nipsnap homolog 3A (C. elegans) (Nipsnap3a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			Nipsnap3b; 2700063N13Rik	Nipsnap3b; 2700063N13Rik
Mus musculus	RefSeq	ILMN_209109	ILMN_209109	NIPSNAP3A	NM_025623.2	NM_025623.2		66536	133892409	NM_025623.2	Nipsnap3a	NP_079899.1	ILMN_2596459	000060273	S	391	GCAGGAACGATTCCTCATTCCAAATTTGGCTTTCATTGATAAACAAGAGG	4	+	53029976-53030025	4qB2	Mus musculus nipsnap homolog 3A (C. elegans) (Nipsnap3a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			Nipsnap3b; 2700063N13Rik	Nipsnap3b; 2700063N13Rik
Mus musculus	RefSeq	ILMN_209109	ILMN_209109	NIPSNAP3A	NM_025623.2	NM_025623.2		66536	133892409	NM_025623.2	Nipsnap3a	NP_079899.1	ILMN_2657376	003710386	S	575	GCCCATGTGGAGCTTGGCTACTCTACACTAGTTGGTGTTTTCCACACCGA	4	+	53033134-53033183	4qB2	Mus musculus nipsnap homolog 3A (C. elegans) (Nipsnap3a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			Nipsnap3b; 2700063N13Rik	Nipsnap3b; 2700063N13Rik
Mus musculus	Riken	ILMN_205548	ILMN_205548	C430026P20RIK	ri|C430026P20|PX00317C12|AK049549|1158					AK049549	C430026P20Rik		ILMN_2573401	004760189	S	576	CATCTTCGTGGACGTTAGGGTGGCCTCATAACTTCAGATAAAAGCAGCCA										
Mus musculus	RefSeq	ILMN_240402	ILMN_240402	ZFP428	NM_146183.1	NM_146183.1		232969	22122718	NM_146183.1	Zfp428	NP_666295.1	ILMN_2813524	007200402	S	728	GAGCAGGGCTCTTGGAGAGGAAGAGGAGGAACCGTCTCGCACTGGGGAAA	7	+	25300363-25300412	7qA3	Mus musculus zinc finger protein 428 (Zfp428), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC38830; AW047854; 2410005H09Rik	MGC38830; AW047854; 2410005H09Rik
Mus musculus	RefSeq	ILMN_223200	ILMN_240402	ZFP428	NM_146183.1	NM_146183.1		232969	22122718	NM_146183.1	Zfp428	NP_666295.1	ILMN_1228583	004480053	S	536	GGTGAAACAGCGAATAGGTGGGGGCAGGGGTGGCCCGTCCCGCCGAGCCC	7	+	25300171-25300220	7qA3	Mus musculus zinc finger protein 428 (Zfp428), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC38830; AW047854; 2410005H09Rik	MGC38830; AW047854; 2410005H09Rik
Mus musculus	RefSeq	ILMN_213557	ILMN_213557	SERPINB3D	NM_201376.1	NM_201376.1		394252	41235786	NM_201376.1	Serpinb3d	NP_958764.1	ILMN_1256750	002450603	S	372	CCAAGCTAACGTGGAATCACTTGATTTTGCACATGCAGCTGAGGAAAGCC	1	-	108977289-108977338	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3D (Serpinb3d), mRNA.				Serpinb3l1	Serpinb3l1
Mus musculus	RefSeq	ILMN_213557	ILMN_213557	SERPINB3D	NM_201376.1	NM_201376.1		394252	41235786	NM_201376.1	Serpinb3d	NP_958764.1	ILMN_3009747	004250768	S	711	GCTAAGTATGTTTGTCCTGCTGCCAGTGGAAATCGATGGACTGAAGAAGT	1	-	108975173-108975174:108975795-108975842	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3D (Serpinb3d), mRNA.				Serpinb3l1	Serpinb3l1
Mus musculus	RefSeq	ILMN_188749	ILMN_259073	4933430H15RIK	XM_001005822.1	XM_001005822.1		74485	94420319	XM_001005822.1	4933430H15Rik	XP_001005822.1	ILMN_1224605	006960161	S	844	GTGCAATACCAGGTTCAGGTCTCCAAGCCCAAGACTTCACCCAAGGCCCC					PREDICTED: Mus musculus RIKEN cDNA 4933430H15 gene (4933430H15Rik), mRNA.					
Mus musculus	Riken	ILMN_206038	ILMN_206038	D030059I21RIK	ri|D030059I21|PX00181H15|AK051043|2114					AK051043	D030059I21Rik		ILMN_1227114	007550639	S	2023	TGACTGAGGGGAAGATGTCTGTGCTGTTTGGGTCACAGTAAAGGGTCCTG										
Mus musculus	RefSeq	ILMN_220384	ILMN_220384	GALK1	NM_016905.2	NM_016905.2		14635	93102412	NM_016905.2	Galk1	NP_058601.2	ILMN_2721360	004230717	S	1062	AGTCGCATGACAGGTGGTGGCTTTGGTGGCTGCACCGTCACATTGCTGGA	11	-	115870153-115870202	11qE2	Mus musculus galactokinase 1 (Galk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IMP]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IDA]; The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose [goid 19402] [evidence IMP]; The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y [goid 46835] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + D-galactose = ADP + D-galactose 1-phosphate [goid 4335] [evidence IDA]; Catalysis of the reaction: ATP + D-galactose = ADP + D-galactose 1-phosphate [goid 4335] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Glk1; Glk; GALK; AA409894; Gk	Glk1; Glk; GALK; AA409894; Gk
Mus musculus	MEEBO	ILMN_193870	ILMN_193870	SULF1	scl18159.25_509				26986616	NM_172294	Sulf1		ILMN_2501191	007330086	S	20	GTCTGTTAAACCTAACCAGCCATTTCTCAGATGCGGATGCCATCTGCTGA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione [goid 6790] [evidence ISO]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [evidence ISO]; Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate [goid 8449] [evidence ISO]		
Mus musculus	Riken	ILMN_204581	ILMN_204581	C130022E19RIK	ri|C130022E19|PX00168M06|AK047931|1390					AK047931	C130022E19Rik		ILMN_1258205	001690692	S	1141	GTCTCTGGTGATCCTCACCAATATGGTGATACTGTGACCTTCAGGACCCC										
Mus musculus	Riken	ILMN_205364	ILMN_205364	D130011M18RIK	ri|D130011M18|PX00182G16|AK051177|2138					AK051177	D130011M18Rik		ILMN_1246540	003800397	S	1293	TCGAGTGCTCTTCTTATCCAAGGGCACCGTTGGAGCACGGCGTGGTGGCA										
Mus musculus	RefSeq	ILMN_184927	ILMN_320828	LOC100047963	XM_001479238.1	XM_001479238.1		100047963	149240960	XM_001479238.1	LOC100047963	XP_001479288.1	ILMN_2478101	001010327	S	1142	GGGTCAGGAAGCCAGTGGAACGGAAGGTCCAAGTACCAAAGGATCCTCAG					PREDICTED: Mus musculus similar to ADIR1 (LOC100047963), mRNA.					
Mus musculus	RefSeq	ILMN_184927	ILMN_320828	LOC100047963	XM_001479238.1	XM_001479238.1		100047963	149240960	XM_001479238.1	LOC100047963	XP_001479288.1	ILMN_2437513	000380215	S	1559	GGCATGTTCTGTTGTGCAGACTGAAAACTTTTTAAAGAGGCCTCGTCATG					PREDICTED: Mus musculus similar to ADIR1 (LOC100047963), mRNA.					
Mus musculus	RefSeq	ILMN_201126	ILMN_201126	LOC382013	XM_356083.1	XM_356083.1			38089303	XM_356083.1	LOC382013		ILMN_1215608	004760136	S	2487	GAGCTGCATGAAGAAGTATGAGGTGAGATGGGCAGAGCCACCTTGGCGTC										
Mus musculus	RefSeq	ILMN_222584	ILMN_222584	BC055324	NM_201364.1	NM_201364.1		381306	41235757	NM_201364.1	BC055324	NP_958752.1	ILMN_2934549	004540672	S	2523	TCTGGGAACCTGCTGCTAAGGTGACTGTAGAAGAAGTGAAGACGTCAGCG	1	-	165885473-165885522	1qH2.2	Mus musculus cDNA sequence BC055324 (BC055324), mRNA.				MGC65590	MGC65590
Mus musculus	RefSeq	ILMN_209781	ILMN_209781	OASL2	NM_011854.2	NM_011854.2		23962	134053897	NM_011854.2	Oasl2	NP_035984.2	ILMN_2599154	007050014	S	2578	CCTAACAGTCAATTAAGCTGAACCCTGCTTAGTCCCCGACCCCCAACTCT	5	+	115361696-115361745	5qF	Mus musculus 2'-5' oligoadenylate synthetase-like 2 (Oasl2), mRNA.		Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. Requires binding of double-stranded RNA [goid 1730] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Mmu-OASL; Oasl; M1204	Mmu-OASL; Oasl; M1204
Mus musculus	RefSeq	ILMN_209383	ILMN_209383	TDGF1	NM_011562.1	NM_011562.1		21667	6755755	NM_011562.1	Tdgf1	NP_035692.1	ILMN_2917458	001050241	S	1616	GGCCAACAAAGACTGAATGGCAAGACCCTCACAGCAAACCCAAACACCTG	9	-	110784594-110784643	9qF3	Mus musculus teratocarcinoma-derived growth factor (Tdgf1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IDA]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISO]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [evidence IMP]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence ISO]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence ISO]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that activates or increases the rate or extent of cell adhesion to an extracellular matrix [goid 1954] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence ISO]	cripto; CR1	cripto; CR1
Mus musculus	RefSeq	ILMN_223618	ILMN_223618	CAMP	NM_009921.1	NM_009921.1		12796	6753471	NM_009921.1	Camp	NP_034051.1	ILMN_2766604	000450670	S	407	GGTTCAAGAAAATTTCCCGGCTGGCTGGACTTCTCCGCAAAGGTGGGGAG	9	-	109750026-109750075	9qF2	Mus musculus cathelicidin antimicrobial peptide (Camp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Granule with a membranous, tubular internal structure, found primarily in mature neutrophil cells. Most are released into the extracellular fluid. Specific granules contain lactoferrin, lysozyme, vitamin B12 binding protein and elastase [goid 42581] [evidence IDA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism [goid 50829] [evidence IDA]		MCLP; FALL39; CAP18; Cnlp; Cramp	MCLP; FALL39; CAP18; Cnlp; Cramp
Mus musculus	RefSeq	ILMN_209757	ILMN_209757	ACTC1	NM_009608.3	NM_009608.3		11464	145966737	NM_009608.3	Actc1	NP_033738.1	ILMN_2598916	001260669	S	1235	CTTATATTCAGGATGACCGTATTGTGCTTCTTGGAATCCTCTGAGCCCCC				2qE4	Mus musculus actin, alpha, cardiac muscle 1 (Actc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process by which the anatomical structures of cardiac muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 55008] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; Formation of the actin-based thin filaments of myofibrils [goid 30240] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Actc-1	Actc-1
Mus musculus	RefSeq	ILMN_209757	ILMN_209757	ACTC1	NM_009608.3	NM_009608.3		11464	145966737	NM_009608.3	Actc1	NP_033738.1	ILMN_2767216	006180554	S	1293	TCTCATCAGTCATTGTACAGTTTGTTTACACAAGTGCAGTTTGTTTGTGC				2qE4	Mus musculus actin, alpha, cardiac muscle 1 (Actc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process by which the anatomical structures of cardiac muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 55008] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; Formation of the actin-based thin filaments of myofibrils [goid 30240] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Actc-1	Actc-1
Mus musculus	RefSeq	ILMN_211202	ILMN_211202	LASS5	NM_028015.2	NM_028015.2		71949	31980682	NM_028015.2	Lass5	NP_082291.1	ILMN_2613558	002940593	S	1667	ACCTCGTCCCATGGCTCTTGAGACTCTGGGTTCCTGATCACTTAAATAAG	15	-	99566316-99566365	15qF1	Mus musculus LAG1 homolog, ceramide synthase 5 (Lass5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]	AU045339; AW544927; Trh4; 2310081H14Rik	AU045339; AW544927; Trh4; 2310081H14Rik
Mus musculus	RefSeq	ILMN_213393	ILMN_213393	0610012D14RIK	NM_026690.1	NM_026690.1		68352	21312001	NM_026690.1	0610012D14Rik	NP_080966.1	ILMN_2848071	000360544	S	652	CCCCAGTCTAGGCTTCGACCGTGTCATTGGGGTGCTTGTGGCTGACCTTA	7	+	51722425-51722474	7qB4	Mus musculus RIKEN cDNA 0610012D14 gene (0610012D14Rik), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; catabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6742] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-aspartate + H2O + NAD(P)+ = oxaloacetate + NH3 + NAD(P)H + H+ [goid 33735] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213393	ILMN_213393	0610012D14RIK	NM_026690.1	NM_026690.1		68352	21312001	NM_026690.1	0610012D14Rik	NP_080966.1	ILMN_1248518	003190202	S	896	TGCTGAGTCTCCTCCCCTACTACCCTTACTGTCATATTGACAACTATGGG	7	+	51723051-51723056:51723057-51723100	7qB4	Mus musculus RIKEN cDNA 0610012D14 gene (0610012D14Rik), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; catabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6742] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-aspartate + H2O + NAD(P)+ = oxaloacetate + NH3 + NAD(P)H + H+ [goid 33735] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214205	ILMN_236938	1700009P17RIK	NM_001081275.1	NM_001081275.1		75472	124486892	NM_001081275.1	1700009P17Rik	NP_001074744.1	ILMN_2645509	000610709	S	705	CATAATTCCCAGCTCCCCGGTTATCCAAGGAGACAACCCAGATGAACCGC	1	+	173056769-173056818	1qH3	Mus musculus RIKEN cDNA 1700009P17 gene (1700009P17Rik), mRNA.				MGC74123; AV282292	MGC74123; AV282292
Mus musculus	RefSeq	ILMN_258932	ILMN_258932	PTPRU	NM_011214.1	NM_011214.1		19273	6755245	NM_011214.1	Ptpru	NP_035344.1	ILMN_2850253	005270161	S	5331	TGGGTCTCCATGGTTCAGTCCTGCTCAGCTTGGGCCTGTGACAATCCACA	4	-	131040626-131040675	4qD2.3	Mus musculus protein tyrosine phosphatase, receptor type, U (Ptpru), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ptprl; PTP; RPTPlambda	Ptprl; PTP; RPTPlambda
Mus musculus	RefSeq	ILMN_211346	ILMN_211346	B3GNT8	NM_146184.4	NM_146184.4		232984	92087056	NM_146184.4	B3gnt8	NP_666296.1	ILMN_2614889	004780047	S	1775	CCTGGCCTGAGTCTCTCCTAAACCCTTCTTAGCCAAGGTGGCAGACTGTG	7	+	26414417-26414466	7qA3	Mus musculus UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 (B3gnt8), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]	B7galt7; MGC32391; BC025206; B3galt7	B7galt7; MGC32391; BC025206; B3galt7
Mus musculus	RefSeq	ILMN_219623	ILMN_219623	QTRT1	NM_021888.1	NM_021888.1		60507	11230787	NM_021888.1	Qtrt1	NP_068688.1	ILMN_1217927	006560722	S	1037	GCAGTATCTTGGAACAGCGCTTTCCTGACTTTGTACGAAACTTCATGCGC	9	+	21224505-21224554	9qA3	Mus musculus queuine tRNA-ribosyltransferase 1 (Qtrt1), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The chemical reactions and pathways resulting in the formation of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents [goid 8616] [evidence IEA]; The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically [goid 6400] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: tRNA guanine + queuine = tRNA queuine + guanine [goid 8479] [evidence IEA]	Tgt; 2610028E17Rik	Tgt; 2610028E17Rik
Mus musculus	MEEBO	ILMN_216283	ILMN_216283	2310009E04RIK	scl25272.22.1_44	XM_131496.4			38079160	XM_131496.4	2310009E04Rik		ILMN_2669361	002030102	S	1782	GCAATCATGAATGGAAGCTGAACATACCTGTCCGTACAGACGCTGTGCCA										
Mus musculus	Riken	ILMN_204605	ILMN_204605	E130106L15RIK	ri|4732474C02|PX00052C21|AK028953|2444					AK028953	E130106L15Rik		ILMN_1219053	004070040	S	2144	TATGGTCTGAGTCATGCCCCTCCGGCTACATGACAAGAGCTAGATGATTC										
Mus musculus	RefSeq	ILMN_219892	ILMN_228678	EG434401	XM_486217.5	XM_486217.5		434401	149259955	XM_486217.5	EG434401	XP_486217.2	ILMN_2714882	003190050	S	538	TTTGTGTATCATATTGTCTGTTAGCATGTACTATTTTCAACCAGTTACTA	9	+	48258926-48258975	9qA5.3	PREDICTED: Mus musculus predicted gene, EG434401 (EG434401), mRNA.					
Mus musculus	RefSeq	ILMN_200046	ILMN_259533	RASL11B	NM_026878.1	NM_026878.1		68939	110625707	NM_026878.1	Rasl11b	NP_081154.1	ILMN_2706819	000150372	S	1655	GCAGGGCTACCTGCCGAATCCCCTACACAGATGCACTTTAAGAAGCCGTT	5	+	74595389-74595438	5qC3.3	Mus musculus RAS-like, family 11, member B (Rasl11b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	1190017B18Rik; MGC103217	1190017B18Rik; MGC103217
Mus musculus	RefSeq	ILMN_259533	ILMN_259533	RASL11B	NM_026878.1	NM_026878.1		68939	110625707	NM_026878.1	Rasl11b	NP_081154.1	ILMN_2793062	000290341	S	1563	ATGGCAATGACGTTGGGTTGCTTCCTGGGCCTGGCTGAGTCGTGGCTATG	5	+	74595297-74595346	5qC3.3	Mus musculus RAS-like, family 11, member B (Rasl11b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	1190017B18Rik; MGC103217	1190017B18Rik; MGC103217
Mus musculus	RefSeq	ILMN_222830	ILMN_232804	LOC636944	XM_912513.1	XM_912513.1		636944	82902020	XM_912513.1	LOC636944	XP_917606.1	ILMN_1226667	007400497	S	38	TGTGGCTTACAGGTGCCAGATGTGACATCCAGATGACTCAGTCTCCAGCC					PREDICTED: Mus musculus similar to Ig kappa chain V-V region K2 precursor (LOC636944), mRNA.					
Mus musculus	RefSeq	ILMN_222830	ILMN_232804	LOC636944	XM_912513.1	XM_912513.1		636944	82902020	XM_912513.1	LOC636944	XP_917606.1	ILMN_1230194	001990706	S	31	CTGCTGCTGTGGCTTACAGGTGCCAGATGTGACATCCAGATGACTCAGTC					PREDICTED: Mus musculus similar to Ig kappa chain V-V region K2 precursor (LOC636944), mRNA.					
Mus musculus	RefSeq	ILMN_189764	ILMN_229875	PCLO	NM_011995.3	NM_011995.3		26875	145207969	NM_011995.3	Pclo	NP_036125.3	ILMN_1226441	000610088	S	15220	GGTTATTAAAAAGAAAACAAGGGTATGTCGACATGATCGAGAGCCTTCCT				5qA1	Mus musculus piccolo (presynaptic cytomatrix protein) (Pclo), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]; A series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response [goid 19933] [evidence IDA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]; The process by which synaptic vesicles are directed to specific destination membranes, mediated by molecules at the vesicle membrane and target membrane surfaces [goid 16080] [evidence NAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin [goid 5522] [evidence IDA]	Acz; Pico; mKIAA0559	Acz; Pico; mKIAA0559
Mus musculus	RefSeq	ILMN_189764	ILMN_229875	PCLO	NM_011995.3	NM_011995.3		26875	145207969	NM_011995.3	Pclo	NP_036125.3	ILMN_2665805	005490184	S	14731	TCAAAGCAAAACCAGTGTCGCCCAGACCCACCTGGAAGATGCAGGGGCGG				5qA1	Mus musculus piccolo (presynaptic cytomatrix protein) (Pclo), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]; A series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response [goid 19933] [evidence IDA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IDA]; The process by which synaptic vesicles are directed to specific destination membranes, mediated by molecules at the vesicle membrane and target membrane surfaces [goid 16080] [evidence NAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin [goid 5522] [evidence IDA]	Acz; Pico; mKIAA0559	Acz; Pico; mKIAA0559
Mus musculus	RefSeq	ILMN_197761	ILMN_197761	LOC381017	XM_358487.1	XM_358487.1			38077849	XM_358487.1	LOC381017		ILMN_2529272	004490630	S	656	GTCAGCTGCCACGCCATGGTGCCAAGCACATAGTAGGACTTCAAGCATGT										
Mus musculus	RefSeq	ILMN_216427	ILMN_216427	MBIP	NM_145442.1	NM_145442.1		217588	21703881	NM_145442.1	Mbip	NP_663417.1	ILMN_2671000	007380601	S	880	GAGACATCTACCAAAGAATTAAAAAGCTTGAAGATAAAATCCTTGAATTG	12	-	57436805-57436854	12qC1	Mus musculus MAP3K12 binding inhibitory protein 1 (Mbip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC7681; 4933408E06Rik	MGC7681; 4933408E06Rik
Mus musculus	RefSeq	ILMN_216427	ILMN_216427	MBIP	NM_145442.1	NM_145442.1		217588	21703881	NM_145442.1	Mbip	NP_663417.1	ILMN_1217143	003440452	S	1205	GCTGCAGTGTTTGGAAATGATGTACATCTTGACCATTGCACTGTTGGAAC	12	-	57429521-57429570	12qC1	Mus musculus MAP3K12 binding inhibitory protein 1 (Mbip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC7681; 4933408E06Rik	MGC7681; 4933408E06Rik
Mus musculus	RefSeq	ILMN_221144	ILMN_221144	CHORDC1	NM_025844.2	NM_025844.2		66917	142388480	NM_025844.2	Chordc1	NP_080120.1	ILMN_1247694	000360725	S	2054	GGGGTGAGCCTTTAAGGATTATACAGTCTTGCTGGTCTGATCCAGTCAGG	9	+	18118293-18118342	9qA2	Mus musculus cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1 (Chordc1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]	1110001O09Rik; Chp-1; AA409036	1110001O09Rik; Chp-1; AA409036
Mus musculus	RefSeq	ILMN_215086	ILMN_215086	ST6GALNAC6	NM_016973.2	NM_016973.2		50935	70778902	NM_016973.2	St6galnac6	NP_058669.1	ILMN_3131666	005670592	A	2317	CTTCCAGAAAGGCTGTGGACTGGGGGTTGGGGGAGACTAGCCAGCAGTGA	2	+	32476184-32476233	2qB	Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 (St6galnac6), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1574] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + glycano-1,3-(N-acetyl-alpha-D-galactosaminyl)-glycoprotein = CMP + glycano-(2,6-alpha-N-acetylneuraminyl)-(N-acetyl-D-galactosaminyl)-glycoprotein [goid 1665] [evidence IDA]	Siat7f	Siat7f
Mus musculus	Riken	ILMN_202176	ILMN_202176	1700021E15RIK	ri|1700021E15|ZX00074A04|AK006197|1366					AK006197	1700021E15Rik		ILMN_1222883	004640156	S	975	TAGAGGCACCAGAAGAGGGCATCAAATCTTATTATGGATGGCTGTGAGCC										
Mus musculus	RefSeq	ILMN_201572	ILMN_201572	OLFR725	NM_146317.1	NM_146317.1		258314	22129656	NM_146317.1	Olfr725	NP_666429.1	ILMN_1225268	002900541	S	900	GCTGAGGGGTCAGTATATGAAACCCAGGCAGGTTTTTGAACTGGTAAGAA	14	-	50654127-50654176	14qC1	Mus musculus olfactory receptor 725 (Olfr725), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR246-7_p; MOR246-3	MOR246-7_p; MOR246-3
Mus musculus	RefSeq	ILMN_201572	ILMN_201572	OLFR725	NM_146317.1	NM_146317.1		258314	22129656	NM_146317.1	Olfr725	NP_666429.1	ILMN_2814107	004810021	S	894	GTCAAAGCTGAGGGGTCAGTATATGAAACCCAGGCAGGTTTTTGAACTGG	14	-	50654133-50654182	14qC1	Mus musculus olfactory receptor 725 (Olfr725), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR246-7_p; MOR246-3	MOR246-7_p; MOR246-3
Mus musculus	RefSeq	ILMN_201572	ILMN_201572	OLFR725	NM_146317.1	NM_146317.1		258314	22129656	NM_146317.1	Olfr725	NP_666429.1	ILMN_1254355	006480300	S	882	GAAAGCAGCTATGTCAAAGCTGAGGGATCAGTATATGAAACCTAGGCAGG	14	-	50654145-50654194	14qC1	Mus musculus olfactory receptor 725 (Olfr725), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR246-7_p; MOR246-3	MOR246-7_p; MOR246-3
Mus musculus	Riken	ILMN_205789	ILMN_205789	D230028J12RIK	ri|D230028J12|PX00189K23|AK051974|2611					AK051974	D230028J12Rik		ILMN_1246908	006350653	S	2429	CATAAAGGGTTCCAAACAATGGCATCTCCCCCACAGGAATGTTGTGTGTG										
Mus musculus	RefSeq	ILMN_216960	ILMN_216960	NRIP1	NM_173440.2	NM_173440.2		268903	141802401	NM_173440.2	Nrip1	NP_775616.1	ILMN_2677483	005720328	S	4415	GTTGGTTGTTTACTATTTCTGTATGCATCAGATAACAACTGTGACTAGCC	16	-	76291171-76291220	16qC3.1	Mus musculus nuclear receptor interacting protein 1 (Nrip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence IPI]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The release of a mature ovum/oocyte from an ovary [goid 30728] [evidence IMP]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IMP]; Disruption of theca cell layer releasing follicular fluid and/or the oocyte [goid 1543] [evidence IMP]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [evidence IPI]; Interacting selectively with a retinoid X receptor [goid 46965] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW456757; 6030458L20Rik; RIP140; 8430438I05Rik; AA959574; 9630050P12	AW456757; 6030458L20Rik; RIP140; 8430438I05Rik; AA959574; 9630050P12
Mus musculus	MEEBO	ILMN_186378	ILMN_186378	MRC2	scl40823.31_186				6678933	NM_008626	Mrc2		ILMN_1238243	002230072	S	3594	ATCCCTACACACAAGCCTTCCTCACACAGGCTGCACGGGGGCTGCAAACA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence ISA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence ISA]		
Mus musculus	RefSeq	ILMN_199353	ILMN_199353	LOC385644	XM_358834.1	XM_358834.1			38080800	XM_358834.1	LOC385644		ILMN_1220243	000060132	S	3798	GTCTCAGATGGAAAGGACTAACAGACCCATCCCTTTAGTTGTGTGCACTC										
Mus musculus	RefSeq	ILMN_214810	ILMN_214810	D15WSU169E	NM_198420.1	NM_198420.1		223666	38259213	NM_198420.1	D15Wsu169e	NP_940812.1	ILMN_2985305	006840131	S	4162	GCTGAGCAAGTTAGCACCACCCTCCTTTGACCTCGCGGCCTCTGACCAAA	15	-	76554678-76554727	15qD3	Mus musculus DNA segment, Chr 15, Wayne State University 169, expressed (D15Wsu169e), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI843066; 9530053N22	AI843066; 9530053N22
Mus musculus	RefSeq	ILMN_249322	ILMN_249322	OTTMUSG00000015762	NM_001039223.1	NM_001039223.1		623781	85986612	NM_001039223.1	OTTMUSG00000015762	NP_001034312.1	ILMN_2932993	002810605	S	2439	GGATGGCGCTGGCCAGACACAGTATGTAACCATCAGAAGCTTGGGCAAGG	2	+	118868388-118868437	2qE5	Mus musculus predicted gene, OTTMUSG00000015762 (OTTMUSG00000015762), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]				
Mus musculus	RefSeq	ILMN_189570	ILMN_189570	TUFM	NM_172745.2	NM_172745.2		233870	142350937	NM_172745.2	Tufm	NP_766333.1	ILMN_2462448	006250605	S	1469	GGCATAAGGCTGCCCTGGTCAGCGTTCCCACTGTGGACACAGGCTGTATC	7	+	133634102-133634151	7qF3	Mus musculus Tu translation elongation factor, mitochondrial (Tufm), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	EF-TuMT; EFTU; C76308; 2300002G02Rik; C76389	EF-TuMT; EFTU; C76308; 2300002G02Rik; C76389
Mus musculus	RefSeq	ILMN_217555	ILMN_241590	DEFB21	NM_207276.2	NM_207276.2		403172	126032315	NM_207276.2	Defb21	NP_997159.1	ILMN_2684681	000770300	S	83	GTCTGGATGTTCTACCTCCCAAGAGCCATGAGGTTCCTGCTGCTGGTTCT	2	+	152399499-152399504:152399505-152399548	2qH1	Mus musculus defensin beta 21 (Defb21), mRNA.				RP23-35I8.3; Defb21; Gm121	RP23-35I8.3; Defb21; Gm121
Mus musculus	Riken	ILMN_201630	ILMN_201630	1110007B02RIK	ri|1110007B02|R000015D12|AK003517|1108					AK003517	1110007B02Rik		ILMN_1254309	006290022	S	594	GAGGATTACCCAACCTGCACCGCAGGACAGTCTCAAGTGATGGGCTAATC										
Mus musculus	RefSeq	ILMN_220561	ILMN_310763	LOC100045098	XR_031396.1	XR_031396.1		100045098	149250326	XR_031396.1	LOC100045098		ILMN_2723751	007560528	S	976	TGCATGTACCGTGTGCGTGTGCACGGCTCTGTAACCCCTCCCAAAGACTC					PREDICTED: Mus musculus similar to spermatogenesis-related gene 4 (LOC100045098), misc RNA.					
Mus musculus	RefSeq	ILMN_213623	ILMN_213623	ADPRHL2	NM_133883.2	NM_133883.2		100206	118129802	NM_133883.2	Adprhl2	NP_598644.1	ILMN_2639063	007550102	S	790	AAGAAGGTCGGAGAGCTGCTGGACCAGGACGTGGTGAGCCGAGAGGAAGT	4	-	125994560-125994609	4qD2.2	Mus musculus ADP-ribosylhydrolase like 2 (Adprhl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of poly(ADP-ribose) at glycosidic (1''-2') linkage of ribose-ribose bond to produce free ADP-ribose [goid 4649] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Arh3; AI836109	Arh3; AI836109
Mus musculus	RefSeq	ILMN_217368	ILMN_217368	APOE	NM_009696.2	NM_009696.2		11816	31981894	NM_009696.2	Apoe	NP_033826.1	ILMN_1216042	007210687	S	702	TTTTGGTGACCGCATCCGAGGGCGGCTGGAGGAAGTGGGCAACCAGGCCC	7	-	20281958-20282007	7qA3	Mus musculus apolipoprotein E (Apoe), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IMP]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42158] [evidence IGI]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42159] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; The regrowth of axons following their loss or damage [goid 31103] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IGI]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IDA]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IGI]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [evidence IMP]; Any process by which a substance or cellular entity, such as a protein complex or organelle, is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere [goid 51651] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The physiological process by which dietary excess is sensed by the central nervous system and results in a reduction in food intake and increased energy expenditure [goid 2021] [evidence IMP]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 8034] [evidence IDA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IDA]	AI255918	AI255918
Mus musculus	RefSeq	ILMN_220170	ILMN_220170	LASS4	NM_026058.2	NM_026058.2		67260	31541929	NM_026058.2	Lass4	NP_080334.2	ILMN_2880467	006560494	S	3098	GAAAATATAGGGGTCATGGGCCAGGTATGGTGGTGCACACCTTTAATCCC	8	+	4525608-4525657	8qA1.1	Mus musculus longevity assurance homolog 4 (S. cerevisiae) (Lass4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30148] [evidence IDA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence IDA]	Trh1; 2900019C14Rik	Trh1; 2900019C14Rik
Mus musculus	RefSeq	ILMN_210645	ILMN_210645	BCAS2	NM_026602.3	NM_026602.3		68183	116686103	NM_026602.3	Bcas2	NP_080878.2	ILMN_1259127	007510253	S	1014	GGCATCCAACATGTTCTGGAAGCTGGAAACCTTGAATTTGTGTTTTTTGT	3	+	102982678-102982727	3qF2.2	Mus musculus breast carcinoma amplified sequence 2 (Bcas2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence ISO]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C76366; C80030; AI132645; MGC7712; 6430539P16Rik	C76366; C80030; AI132645; MGC7712; 6430539P16Rik
Mus musculus	RefSeq	ILMN_199973	ILMN_199973	LOC384131	XM_358737.1	XM_358737.1			38079389	XM_358737.1	LOC384131		ILMN_1219859	004830446	S	166	CATCGCACCAAGGGCCTGTGCTCCTTCATCCTGGTGTGCTCCTTCATCCT										
Mus musculus	MEEBO	ILMN_195123	ILMN_195123	E030026I10RIK	scl24190.1_328				31342164	NM_175553	E030026I10Rik		ILMN_1241756	003370279	S	3	CAGACTGGGCCGGAATGTTAGTGAAGGTTTTATTGTGCCCGGTTGGAGGA										
Mus musculus	MEEBO	ILMN_195123	ILMN_195123	E030026I10RIK	scl24190.1_328				31342164	NM_175553	E030026I10Rik		ILMN_2646631	000270681	S	4054	GTATGTTGAGATTGTGAAAGCGCTTCAGTGGCACTAGCCTACGGGACCCT										
Mus musculus	Riken	ILMN_207142	ILMN_207142	EIF3S2	ri|F730008P07|PL00003C23|AK089340|2319					AK089340	Eif3s2		ILMN_1225099	001690458	S	2214	GACAGAAGGCCGCAGATCCCTTAGGACAGGAGTTATAAATGGTTGCGAGC										
Mus musculus	RefSeq	ILMN_216078	ILMN_216078	PPP1R3C	NM_016854.2	NM_016854.2		53412	148540121	NM_016854.2	Ppp1r3c	NP_058550.1	ILMN_2667091	004900438	S	2467	GATTGTCCGGTGTGCATGTACTTTGAGGTGAGTTGGGAAAGTGCAGTGGA				19qC2	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 3C (Ppp1r3c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence TAS]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IMP]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	PTG; Ppp1r5	PTG; Ppp1r5
Mus musculus	MEEBO	ILMN_214069	ILMN_214069	A730020M07RIK	scl21587.5.1_3	NM_176992.2			31342540	NM_176992.2	A730020M07Rik		ILMN_2643900	006520019	S	1877	GATCACCATCTTCACAGTCGAATATACACATCATGATTTCTGTCTCGGTT										
Mus musculus	RefSeq	ILMN_221729	ILMN_221729	NR6A1	NM_010264.3	NM_010264.3		14536	142380165	NM_010264.3	Nr6a1	NP_034394.1	ILMN_2739599	001710747	S	6203	GCAAGGGGTGGGCCCTGTTCTGTGAATTGACTACCTGTGGAAATGTGACC	2	-	38578971-38579020	2qB	Mus musculus nuclear receptor subfamily 6, group A, member 1 (Nr6a1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [pmid 7835709] [evidence IEP]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [pmid 7854358] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Gcnf; RTR; NCNF; 1700113M01Rik	Gcnf; RTR; NCNF; 1700113M01Rik
Mus musculus	RefSeq	ILMN_219275	ILMN_219275	TJP1	NM_009386.1	NM_009386.1		21872	6678354	NM_009386.1	Tjp1	NP_033412.1	ILMN_2706587	005260494	S	6908	GGCACATCAGCACGATTTCTGTTTAGATAATACACCACTACATTCTGTTA	7	-	72441142-72441191	7qC	Mus musculus tight junction protein 1 (Tjp1), mRNA.	An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISO]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence ISO]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence ISO]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates [goid 46581] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]	The initial formation of a blastocyst from a solid ball of cells known as a morula [goid 1825] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]	ZO1; ZO-1	ZO1; ZO-1
Mus musculus	RefSeq	ILMN_190654	ILMN_219531	WDR48	NM_026236.3	NM_026236.3		67561	146135057	NM_026236.3	Wdr48	NP_080512.1	ILMN_1242510	004290279	S	2622	CCTACAAGAGCACAGCTGAGACGTGGCATTTCAAAAGTAGCCCAACATGG				9qF4	Mus musculus WD repeat domain 48 (Wdr48), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]			8430408H12Rik; mKIAA1449	8430408H12Rik; mKIAA1449
Mus musculus	RefSeq	ILMN_219999	ILMN_219999	FASTKD5	NM_198176.1	NM_198176.1		380601	38016134	NM_198176.1	Fastkd5	NP_937819.1	ILMN_2716247	003390167	S	2940	AGGTGGGTAATAACCGTCTGTTGAGTAGCCATGGGTGCAGTGCCTGTAGC	2	-	130439655-130439704	2qF1	Mus musculus FAST kinase domains 5 (Fastkd5), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA1792; FLJ13149; KIAA1792; C78212; MGC60835	mKIAA1792; FLJ13149; KIAA1792; C78212; MGC60835
Mus musculus	RefSeq	ILMN_244233	ILMN_244233	LOC639396	NM_001039251.1	NM_001039251.1		639396	85986668	NM_001039251.1	LOC639396	NP_001034340.1	ILMN_2877059	007650754	S	3180	CCTGCTTATCCAGCCTGAAGCACAATTGTTCAAAGGGGGGACCATCTCAG	9	+	72493296-72493345	9qD	Mus musculus similar to neural precursor cell expressed, developmentally down-regulated 4 isoform 2 (LOC639396), mRNA.					
Mus musculus	RefSeq	ILMN_188365	ILMN_225622	KCNF1	NM_201531.2	NM_201531.2		382571	142348935	NM_201531.2	Kcnf1	NP_963289.1	ILMN_2657243	007380228	S	4197	CAGCTGGAGCCTGGGGCTGCTAATCCACAAAATGGCTTTGAACTATCAGA	12	-	17179085-17179134	12qA1.1	Mus musculus potassium voltage-gated channel, subfamily F, member 1 (Kcnf1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	MGC62472; Gm1182; Kv5.1	MGC62472; Gm1182; Kv5.1
Mus musculus	RefSeq	ILMN_190150	ILMN_235673	ITPR2	NM_010586.1	NM_010586.1		16439	60592757	NM_010586.1	Itpr2	NP_034716.1	ILMN_1222452	002650133	S	2806	CCCCGGCGAGCAGGAGGATGTGACAGTGATGGACACCAAGCTGAAGGTTA	6	-	146307829-146307878	6qG3	Mus musculus inositol 1,4,5-triphosphate receptor 2 (Itpr2), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IDA];  [goid 15278] [evidence IDA]; Combining with inositol-1,4,5-triphosphate to initiate a change in cell activity [goid 8095] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5220] [evidence IEA]	Ip3r2; AI649341; InsP3R-2; Itpr5; InsP3R-5	Ip3r2; AI649341; InsP3R-2; Itpr5; InsP3R-5
Mus musculus	RefSeq	ILMN_217454	ILMN_235673	ITPR2	NM_010586.1	NM_010586.1		16439	60592757	NM_010586.1	Itpr2	NP_034716.1	ILMN_1243385	005820291	S	234	CTGCCCAGAAGCAATACTGGAAAGCCAAGCAGGCGAAACAGGGGAACCAT	6	-	146375006-146375055	6qG3	Mus musculus inositol 1,4,5-triphosphate receptor 2 (Itpr2), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IDA];  [goid 15278] [evidence IDA]; Combining with inositol-1,4,5-triphosphate to initiate a change in cell activity [goid 8095] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5220] [evidence IEA]	Ip3r2; AI649341; InsP3R-2; Itpr5; InsP3R-5	Ip3r2; AI649341; InsP3R-2; Itpr5; InsP3R-5
Mus musculus	Riken	ILMN_203834	ILMN_203834	A230081P14RIK	ri|A230081P14|PX00130E06|AK038992|1583					AK038992	A230081P14Rik		ILMN_2560314	002810356	S	1220	GAACTGACACATGTCCCTGAGTGACGTGAGGAAAGACCCTGCACGGCTCG										
Mus musculus	MEEBO	ILMN_215156	ILMN_215156	5830407P18RIK	scl0078818.1_318	XM_147876.1			20882030	XM_147876.1	5830407P18Rik		ILMN_1237548	001690470	S	2308	GGAAGCCATGGAATCAGTGAGAGTTTGGGAATGGATGGCCTGAAACGCTC										
Mus musculus	RefSeq	ILMN_199113	ILMN_311592	LOC622655	XR_032410.1	XR_032410.1		622655	149261587	XR_032410.1	LOC622655		ILMN_1259869	006660196	S	8	CGTGCTACCCGGGGACGGGTCCATACGGTGTTGTTCTTGATTCCCATTGT				10qD3	PREDICTED: Mus musculus similar to hCG31107 (LOC622655), misc RNA.					
Mus musculus	RefSeq	ILMN_200944	ILMN_200944	LOC385494	XM_358253.1	XM_358253.1			38087239	XM_358253.1	LOC385494		ILMN_2540560	004180255	S	68	GGTGGAAAATAGCCACTGCCATCATTAAGGGCGTGGGGCGGAGCTATGCT										
Mus musculus	Riken	ILMN_207178	ILMN_207178	F830028N15RIK	ri|F830028N15|PL00006H07|AK089820|2981					AK089820	F830028N15Rik		ILMN_1226792	001400370	S	2824	CTGGTACAGCAAAAGCCGGGTAGATCAATGGAATAGAGTAGAAGACCCAG										
Mus musculus	RefSeq	ILMN_220932	ILMN_245032	RLN1	NM_011272.1	NM_011272.1		19773	51093875	NM_011272.1	Rln1	NP_035402.1	ILMN_1249886	005810152	S	424	GGCAGTCCTCCAGGGCTTAAATACTTGCAATCAGATACCCATTCACGGAA	19	-	29406394-29406443	19qC1	Mus musculus relaxin 1 (Rln1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]	rlx; Rln	rlx; Rln
Mus musculus	RefSeq	ILMN_199807	ILMN_199807	LOC383038	XM_356815.1	XM_356815.1			38077523	XM_356815.1	LOC383038		ILMN_1212954	005560376	S	311	GCAGCCGCTCTGCCTTCTTCTGGGCTGCTGAATGGACTAGAATTCAGGGA										
Mus musculus	Riken	ILMN_204034	ILMN_204034	CAMK2D	ri|A730018N16|PX00149D11|AK042722|966					AK042722	Camk2d		ILMN_1216561	004480403	S	759	GAAGCTGATGCCAGGTAAGTGGCTTGCCCTGAGCAAGATGAAGACTCCTC						Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]		
Mus musculus	RefSeq	ILMN_218952	ILMN_218952	SNAI3	NM_013914.2	NM_013914.2		30927	31560481	NM_013914.2	Snai3	NP_038942.1	ILMN_1239726	000870072	S	1482	TGTCCTCAGCACTGTTGTCCTGCTTGGGGCTGGCCTCGGTGGCTGGTTAA	8	-	124978163-124978212	8qE1	Mus musculus snail homolog 3 (Drosophila) (Snai3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]	Smuc; Zfp293; AI643946	Smuc; Zfp293; AI643946
Mus musculus	Riken	ILMN_206802	ILMN_206802	A530032J19RIK	ri|A530032J19|PX00140B23|AK079976|853					AK079976	A530032J19Rik		ILMN_2582798	005260156	S	410	AGGGAGGGAGGAGAATCCCCGGTACAAAGCGCAGGCGACAGAGAGCCAGG										
Mus musculus	RefSeq	ILMN_256931	ILMN_256931	9230002F21RIK	NM_001002791.1	NM_001002791.1		442835	50582602	NM_001002791.1	9230002F21Rik	NP_001002791.1	ILMN_2831391	003840241	S	442	AAAGGCCAGCAATGCCGCAAAGGCCAGCGCTGCCACAATGGCTGGCAATA	2	-	152177240-152177289	2qH1	Mus musculus RIKEN cDNA 9230002F21 gene (9230002F21Rik), mRNA.				Defb22	Defb22
Mus musculus	RefSeq	ILMN_256931	ILMN_256931	9230002F21RIK	NM_001002791.1	NM_001002791.1		442835	50582602	NM_001002791.1	9230002F21Rik	NP_001002791.1	ILMN_2831388	004220279	S	514	AATTGCCAGCACTCCCGCACAGGCCAGCACTCCCACAAAGGCCAACTCTA	2	-	152177168-152177217	2qH1	Mus musculus RIKEN cDNA 9230002F21 gene (9230002F21Rik), mRNA.				Defb22	Defb22
Mus musculus	Riken	ILMN_203649	ILMN_203649	9330179N16RIK	ri|9330179N16|PX00107K23|AK034336|2647					AK034336	9330179N16Rik		ILMN_1238810	006560750	S	2138	CCCTGAAAACAGCTTCTGGGACAATGTCCAATGGAAGTGGCAAAAATGTG										
Mus musculus	RefSeq	ILMN_206031	ILMN_245816	MPP7	XM_919216.2	XM_919216.2		75739	94404196	XM_919216.2	Mpp7	XP_924309.2	ILMN_1220303	000290653	S	674	AGCGAGCCCCTGGTGAGACTGTTCTGCATCTATCTTCAGACATGAGTAGA				18qA1	PREDICTED: Mus musculus membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7), transcript variant 8 (Mpp7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_202918	ILMN_202918	4732471N16RIK	ri|4732471N16|PX00051N12|AK028934|2761					AK028934	4732471N16Rik		ILMN_2553323	006560026	S	2440	TCTTTTCCACTACCTCTGGTGGCTGGTGGGCTAGAAGGGAGGTTGAAGCA										
Mus musculus	MEEBO	ILMN_212639	ILMN_212639	D130051D11RIK	scl47654.2.2098_46	XM_358472.1			38077099	XM_358472.1	D130051D11Rik		ILMN_2628747	001510743	S	383	CTGCCAGGGTTCCCGGCCAGCTTTCTAAAACACCATTATTCTTGGACATG										
Mus musculus	RefSeq	ILMN_201165	ILMN_201165	LOC382048	XM_356121.1	XM_356121.1			38089566	XM_356121.1	LOC382048		ILMN_2541319	006900221	S	1875	GCGGCTGCAGTGTGCCTCTTGCGCTTTGGAGCCTGTTTGCCGAAGGAATT										
Mus musculus	RefSeq	ILMN_201538	ILMN_228095	EG434404	XM_486222.5	XM_486222.5		434404	149259968	XM_486222.5	EG434404	XP_486222.2	ILMN_1232951	007380576	S	761	GAGCTTCTACTTCTAAGTCTGAGTCCAGTCAAAAATGAGTCTTTAAGAGC	9	-	53497626-53497638:53497639-53497675	9qA5.3	PREDICTED: Mus musculus predicted gene, EG434404 (EG434404), mRNA.					
Mus musculus	RefSeq	ILMN_222577	ILMN_222577	RRH	NM_009102.3	NM_009102.3		20132	114842394	NM_009102.3	Rrh	NP_033128.1	ILMN_2843970	004560338	S	880	CTACGTTCTACAACCCCTGTATTTACGTGGCTGCGCATAAGAAGTTTCGG	3	-	129511957-129511964:129513444-129513485	3qG3	Mus musculus retinal pigment epithelium derived rhodopsin homolog (Rrh), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_230872	ILMN_230872	PKIG	NM_001039391.1	NM_001039391.1		18769	86476073	NM_001039391.1	Pkig	NP_001034480.1	ILMN_3090728	000110192	A	939	GACTGATACTTAGGCCCAGGAAATAAATGCTGGTGGTTTGTGTGACTGGC	2	+	163551885-163551894	2qH3	Mus musculus protein kinase inhibitor, gamma (Pkig), transcript variant 3, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of proteins from the cytoplasm into the nucleus [goid 42308] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IDA]	PKIgamma	PKIgamma
Mus musculus	RefSeq	ILMN_230872	ILMN_230872	PKIG	NM_001039391.1	NM_001039391.1		18769	86476073	NM_001039391.1	Pkig	NP_001034480.1	ILMN_3090731	006180392	A	272	CACTTGAGGGAGCAGAAGGACAGGCAGAGGGAAGTACCCCCGACAAGGAA	2	+	163551218-163551267	2qH3	Mus musculus protein kinase inhibitor, gamma (Pkig), transcript variant 3, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of proteins from the cytoplasm into the nucleus [goid 42308] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IDA]	PKIgamma	PKIgamma
Mus musculus	RefSeq	ILMN_220579	ILMN_230102	MPI	NM_025837.2	NM_025837.2		110119	142345292	NM_025837.2	Mpi	NP_080113.1	ILMN_2724022	001430494	S	1362	GGTGTAGCCCAATCCCTGTCCCTGTTGTGCACTCTTTGAATGTATACTGG	9	-	57392420-57392469	9qB	Mus musculus mannose phosphate isomerase (Mpi), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IC ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: D-mannose 6-phosphate = D-fructose 6-phosphate [goid 4476] [evidence IDA]	Mpi-1; Mpi1; 1110002E17Rik	Mpi-1; Mpi1; 1110002E17Rik
Mus musculus	RefSeq	ILMN_209079	ILMN_209079	CEACAM10	NM_007675.3	NM_007675.3		26366	142352593	NM_007675.3	Ceacam10	NP_031701.2	ILMN_1234281	006560131	S	898	TTCTTCTTTCATTGCTCTTTCTAACTGGAACCGAACTCTGGGAAAGAGGG	7	+	25569526-25569575	7qA3	Mus musculus carcinoembryonic antigen-related cell adhesion molecule 10 (Ceacam10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Bgp3; Cea10	Bgp3; Cea10
Mus musculus	RefSeq	ILMN_191041	ILMN_232692	BC025076	XM_993583.1	XM_993583.1		216829	94391565	XM_993583.1	BC025076	XP_998677.1	ILMN_2475559	003450286	S	41	CTGCTGCTGATACGTATCAGAAAAGCCTTGGGCTTCCAGATCCCTGGCTC				11qB2	PREDICTED: Mus musculus cDNA sequence BC025076, transcript variant 1 (BC025076), mRNA.					
Mus musculus	Riken	ILMN_204985	ILMN_204985	CSTF2	ri|C630034J23|PX00085K07|AK049971|3663					AK049971	CSTF2		ILMN_1238915	005220273	S	1043	GACCAGTGCCCATGGAACGAGGACAAGGTGATGCTCCCAATGACCCGCGG										
Mus musculus	RefSeq	ILMN_214521	ILMN_214521	RAD50	NM_009012.1	NM_009012.1		19360	6679608	NM_009012.1	Rad50	NP_033038.1	ILMN_2867427	000110338	S	4942	GTGCCATCTGCAGATTTGTTGGGTGTCACCTCTAGAACAAAGGTTTTTTC	11	-	53493631-53493680	11qB1.3	Mus musculus RAD50 homolog (S. cerevisiae) (Rad50), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Trimeric protein complex that possesses endonuclease activity; involved in DNA repair and checkpoint signaling. In Saccharomyces the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins related to the Saccharomyces proteins [goid 30870] [evidence IEA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]	Rad50l; Mrell	Rad50l; Mrell
Mus musculus	Riken	ILMN_205868	ILMN_205868	C130008L17RIK	ri|C130008L17|PX00167D13|AK047852|2115					AK047852	C130008L17Rik		ILMN_1220710	000870576	S	1656	GACATGGCCTGTGTGAAACCCCAAGATCTACAGCTGACTTTTGCCCTGCC										
Mus musculus	RefSeq	ILMN_211205	ILMN_211205	TRIM66	NM_181853.3	NM_181853.3		330627	144446010	NM_181853.3	Trim66	NP_862901.2	ILMN_1249793	003990564	S	6209	CCTTTCCTGGACCAGCTGGAGACTGTGACCATAAAAATGGAAATGCCTGG	7	-	116602255-116602304	7qE3	Mus musculus tripartite motif-containing 66 (Trim66), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure [goid 10369] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]	Kiaa0298-hp; KIAA0298; Tif1d; D7H11orf29	Kiaa0298-hp; KIAA0298; Tif1d; D7H11orf29
Mus musculus	RefSeq	ILMN_217144	ILMN_217144	KCNG3	NM_153512.1	NM_153512.1		225030	23943841	NM_153512.1	Kcng3	NP_705732.1	ILMN_1237974	000050435	S	3077	TGGCAGAAACTAGCATAGGCCACATTTCATTCTCGTTGCCATGATCAGGC	17	-	83985526-83985575	17qE4	Mus musculus potassium voltage-gated channel, subfamily G, member 3 (Kcng3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence ISA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence ISA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Kv10.1a; KV6.3; Kv10.1b	Kv10.1a; KV6.3; Kv10.1b
Mus musculus	RefSeq	ILMN_190758	ILMN_241523	1700023C21RIK	XM_987400.1	XM_987400.1		73257	94390908	XM_987400.1	1700023C21Rik	XP_992494.1	ILMN_2473021	006270240	S	283	AAAGAAAATCACACCATCGTCTATCCAAACTGGGACAAGATCAGCAAGAC	11	+	109709682-109709731	11qE1	PREDICTED: Mus musculus RIKEN cDNA 1700023C21 gene (1700023C21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_185018	ILMN_185018	TSX	NM_009440.1	NM_009440.1		22127	6678450	NM_009440.1	Tsx	NP_033466.1	ILMN_2423507	006450681	S	367	ACAATAATGTGAAAGTCATCACTGGCAACATTAAAGCAAGCCCCTCCATG	X	+	100609867-100609891:100609892-100609916	XqD	Mus musculus testis specific X-linked gene (Tsx), mRNA.				AV207184	AV207184
Mus musculus	Riken	ILMN_205913	ILMN_205913	IGFBPL	ri|A730098E13|PX00154K05|AK043464|1084					AK043464	IGFBPL		ILMN_2576149	001940544	S	843	TCTCAGACCAAGGGCTTCGAGGAGCTTCCAGCCACAAAGGGCAAGACCTT										
Mus musculus	RefSeq	ILMN_202851	ILMN_254858	EG544710	NM_001024709.2	NM_001024709.2		544710	142363864	NM_001024709.2	EG544710	NP_001019880.1	ILMN_1257400	006960291	S	1063	GTAGTCCCTACCCAACAGACTTCAGGGAGACACTTTCTGGGCTACTAGAC	10	+	77299754-77299803	10qC1	Mus musculus predicted gene, EG544710 (EG544710), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211886	ILMN_211886	4930590J08RIK	NM_198668.1	NM_198668.1		381798	38348569	NM_198668.1	4930590J08Rik	NP_941070.1	ILMN_2620409	001820646	S	3129	CCCCATCTGATGATTATGAAGGAAGTGTCTCTTCAGTGGCGCTTGTGGAC	6	+	91899975-91900024	6qD1	Mus musculus RIKEN cDNA 4930590J08 gene (4930590J08Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm1071	Gm1071
Mus musculus	RefSeq	ILMN_190880	ILMN_228504	1810058I24RIK	XR_002347.1	XR_002347.1		67705	94377264	XR_002347.1	1810058I24Rik		ILMN_2474061	001440431	S	909	TCTTTATGCTGGCACTTGATAGGATGGGTGGATAAATGAGGAGCTGTTGA	6	+	35211884-35211933	6qB1	PREDICTED: Mus musculus RIKEN cDNA 1810058I24 gene (1810058I24Rik), misc RNA.					
Mus musculus	Riken	ILMN_204468	ILMN_204468	LRP5	ri|B130001A14|PX00157G12|AK044793|2101					AK044793	Lrp5		ILMN_1231731	004780520	S	1940	GTGGCTGCTGGGAGTTCTATTCTTGGAACCCACATGCTGGAAGCAGGATC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221154	ILMN_221154	ETD	NM_175147.2	NM_175147.2		69501	31341018	NM_175147.2	Etd	NP_780356.1	ILMN_2731637	000580669	S	400	TCATGTTTATGTCTAAAAAGAAGTGAAATAACAAGCCACTCTCATGTTTG	X	+	50796675-50796724	XqA5	Mus musculus embryonic testis differentiation (Etd), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700030K02Rik	1700030K02Rik
Mus musculus	Riken	ILMN_207249	ILMN_207249	F830031D20RIK	ri|F830031D20|PL00006H08|AK089834|1839					AK089834	F830031D20Rik		ILMN_2586164	006270154	S	1673	GCAGTGCCCAGCACCTTTGAAACCAGATAGGATGTTGCCAGCCTGTAACC										
Mus musculus	RefSeq	ILMN_200247	ILMN_200247	LOC386063	XM_359050.1	XM_359050.1			38081075	XM_359050.1	LOC386063		ILMN_1244922	007100347	S	1408	CCTGAGGCTTCTGATGTTCTTAGGAAAGTGGAAAAGGCGATCCAAGCAGC										
Mus musculus	RefSeq	ILMN_197626	ILMN_241622	LOC634449	XM_913205.2	XM_913205.2		634449	94370269	XM_913205.2	LOC634449	XP_918298.1	ILMN_1231415	007400332	S	998	GGAGTTCCCACTGCCACCCTACGCTTATACCAACCAGGTCCAGGGCTTCT					PREDICTED: Mus musculus similar to prochymosin, transcript variant 1 (LOC634449), mRNA.					
Mus musculus	RefSeq	ILMN_219491	ILMN_219491	CDC16	NM_027276.2	NM_027276.2		69957	68448514	NM_027276.2	Cdc16	NP_081552.2	ILMN_2709525	001770730	S	1662	TGTTACAATGCTTGGTCACTGCATTGAAATGTACATCGGGGATTCGGAAG	8	+	13779260-13779309	8qA1.1	Mus musculus CDC16 cell division cycle 16 homolog (S. cerevisiae) (Cdc16), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence ISO]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	APC6; 2700071J12Rik; 2810431D22Rik	APC6; 2700071J12Rik; 2810431D22Rik
Mus musculus	RefSeq	ILMN_211367	ILMN_313814	OTUD3	XM_001477728.1	XM_001477728.1		73162	149253201	XM_001477728.1	Otud3	XP_001477778.1	ILMN_2615134	001010301	S	1655	CCTGGATGCATGGGGTGGGTTCCTTGTACCGATTCTTGAAGTCGCTCAGC				4qD3	PREDICTED: Mus musculus OTU domain containing 3 (Otud3), mRNA.					
Mus musculus	MEEBO	ILMN_221848	ILMN_221848	LRRC4	scl0192198.1_50	NM_138682.1			20373168	NM_138682.1	Lrrc4		ILMN_2741194	005870685	S	2087	GCACAAAAAAGAGCAACTTTTGTACAGAGTGGGGAGAGACTTTTTCTTGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217122	ILMN_217122	OLFR672	NM_146760.1	NM_146760.1		258755	22203786	NM_146760.1	Olfr672	NP_666971.1	ILMN_1259759	005960730	S	853	CCCCCTGCTCTTAACCCTCTTATTTATGGGGTGAGAACCAAACAGATTCG	7	-	112144514-112144563	7qE3	Mus musculus olfactory receptor 672 (Olfr672), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR32-4; Ors46	MOR32-4; Ors46
Mus musculus	RefSeq	ILMN_216524	ILMN_216524	TACR3	NM_021382.4	NM_021382.4		21338	146134972	NM_021382.4	Tacr3	NP_067357.1	ILMN_1237995	004060674	S	3019	CCTTTCCAGTTAGGGGAACTGCCATGTGTAGGCACATTTAAGAGGCCCAG				3qG3	Mus musculus tachykinin receptor 3 (Tacr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with tachykinin to initiate a change in cell activity [goid 4995] [evidence IEA]	Tac3r; Nk3r	Tac3r; Nk3r
Mus musculus	RefSeq	ILMN_214503	ILMN_214503	H2AFY	NM_012015.1	NM_012015.1		26914	41152516	NM_012015.1	H2afy	NP_036145.1	ILMN_1242842	006480433	S	1106	GCTTGGCTCTAGCTGATGACAGAAAGCTGAAATCCATCGCCTTCCCATCC	13	-	56184481-56184530	13qB1	Mus musculus H2A histone family, member Y (H2afy), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1740] [evidence ISO]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence TAS]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Compensating for the two-fold variation in X:autosome chromosome ratios between sexes by a global activation or inactivation of all, or most of, genes on one or both of the X chromosomes [goid 7549] [evidence ISO]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2AF12M; mH2a1; macroH2A1	H2AF12M; mH2a1; macroH2A1
Mus musculus	RefSeq	ILMN_211783	ILMN_211783	DNAJC5B	NM_025489.2	NM_025489.2		66326	42475999	NM_025489.2	Dnajc5b	NP_079765.2	ILMN_2619505	002690301	S	671	CCGTGGAGGGTCCACAGCTCCTCTTTTTGGTTCAGCCATGTCTCTGGGTG	3	+	19510647-19510696	3qA2	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 5 beta (Dnajc5b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	1700008A05Rik	1700008A05Rik
Mus musculus	RefSeq	ILMN_216555	ILMN_216555	CCNA2	NM_009828.1	NM_009828.1		12428	6753307	NM_009828.1	Ccna2	NP_033958.1	ILMN_2672442	001660639	S	2702	AAACTGCTTTGTTTGCCCATTTTTCTCTTGAACAGTAATTATATATGTGT	3	-	36463791-36463840	3qB	Mus musculus cyclin A2 (Ccna2), mRNA.	The pronucleus originating from the spermatozoa that was involved in fertilization [goid 1940] [evidence IDA]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ccna; Cyca; AA408589; Ccn-1; Ccn1	Ccna; Cyca; AA408589; Ccn-1; Ccn1
Mus musculus	RefSeq	ILMN_196472	ILMN_196472	RIMBP2	XM_132396.8	XM_132396.8		231760	94375649	XM_132396.8	Rimbp2	XP_132396.5	ILMN_1214474	006270019	S	6441	CAGCCAGGGAGCTGACCAATCTTTGCCTTTAGTGTCCTATCCTGTGGCTT	5	-	129072974-129073023	5qG1.3	PREDICTED: Mus musculus RIMS binding protein 2, transcript variant 1 (Rimbp2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	Riken	ILMN_204134	ILMN_204134	B230310H07RIK	ri|B230310H07|PX00159F06|AK045769|3474					AK045769	B230310H07Rik		ILMN_1232487	004850066	S	3223	AGGGCACCTGATCACTCCGACAAGTGACAGCAAAGGAGATGCAGACAGGC										
Mus musculus	RefSeq	ILMN_197545	ILMN_197545	LOC242037	XM_143246.2	XM_143246.2			38076509	XM_143246.2	LOC242037		ILMN_1219867	003170040	S	1801	TGTTCCAGTGCTAGCCTCTGGTGAGCTTTATAACCCTGGACGGCAGAAGG										
Mus musculus	RefSeq	ILMN_213909	ILMN_213909	MYCL1	NM_008506.2	NM_008506.2		16918	34328139	NM_008506.2	Mycl1	NP_032532.1	ILMN_1221750	001580445	S	3156	GGGACTCCTGGAACTATCTTGGGAGGACAAGTGGTGAACAGGCTAAAGTC	4	+	122679383-122679432	4qD2.2	Mus musculus v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian) (Mycl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Lmyc1; AW536278; Lmyc-1; MGC102165	Lmyc1; AW536278; Lmyc-1; MGC102165
Mus musculus	RefSeq	ILMN_220416	ILMN_220416	OLFR878	NM_146798.1	NM_146798.1		258794	22129256	NM_146798.1	Olfr878	NP_667009.1	ILMN_2721736	003830138	S	676	CTCTCCAACATTCTTAAGATTCCTTCTGCTGAAGGTAGATCCAAAGCCTT	9	+	37726904-37726953	9qA4	Mus musculus olfactory receptor 878 (Olfr878), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR163-1	MOR163-1
Mus musculus	Riken	ILMN_206929	ILMN_206929	D430013O20RIK	ri|D430013O20|PX00194A02|AK084929|2364					AK084929	D430013O20Rik		ILMN_1215470	005490632	S	2159	CAGTGCTGGGGCAGCTGTGAAAGGTTGAGACCCTGCTCGCTTGCTCTTCA										
Mus musculus	RefSeq	ILMN_222071	ILMN_222071	MRPL34	NM_053162.2	NM_053162.2		94065	114145576	NM_053162.2	Mrpl34	NP_444392.1	ILMN_2744204	002340239	S	324	ATGCTGAAGGGCCGCAAGTCCCTGAGCCACTGAGGAGCGCAACGTCGCAG	8	+	73989330-73989362:73989363-73989379	8qB3.3	Mus musculus mitochondrial ribosomal protein L34 (Mrpl34), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D8Bwg1484e; 0610007O17Rik	D8Bwg1484e; 0610007O17Rik
Mus musculus	RefSeq	ILMN_211011	ILMN_258823	SETBP1	NM_053099.1	NM_053099.1		240427	51890214	NM_053099.1	Setbp1	NP_444329.1	ILMN_1229372	005720408	S	4386	GCCTCGGGCCAGGATGCAGTGATGGCCACCATCGAGGCTGTCATCCACAT	18	-	78952191-78952240	18qE3	Mus musculus SET binding protein 1 (Setbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	mKIAA0437; C130092E12; Seb; MGC90748	mKIAA0437; C130092E12; Seb; MGC90748
Mus musculus	MEEBO	ILMN_208936	ILMN_208936	HADHSC	scl015107.1_301	NM_008212.1			6680162	NM_008212.1	Hadhsc		ILMN_2661733	004730468	S	187	GGACCAAACGGAAGACATCCTGGCAAAATCCAAGAAGGGAATTGAGGAGA										
Mus musculus	RefSeq	ILMN_220512	ILMN_319074	LOC100044164	XM_001471933.1	XM_001471933.1		100044164	149263586	XM_001471933.1	LOC100044164	XP_001471983.1	ILMN_2723035	006280735	S	3826	GGGCATGGGGCTAGATGGGTTTGAAAGTGGGAGAGACCCTCCTAGGGTGT					PREDICTED: Mus musculus hypothetical protein LOC100044164 (LOC100044164), mRNA.					
Mus musculus	RefSeq	ILMN_199978	ILMN_239237	ENSMUSG00000053178	NM_001042670.1	NM_001042670.1		208595	111161291	NM_001042670.1	ENSMUSG00000053178	NP_001036135.1	ILMN_1248721	006660397	S	830	ACAGGACCTGCTGCTTCTGATATGTGGCCCAGGAGCTAGAATCTTAGACC	5	+	4197113-4197162	5qA1	Mus musculus predicted gene, ENSMUSG00000053178 (ENSMUSG00000053178), nuclear gene encoding mitochondrial protein, mRNA.					
Mus musculus	RefSeq	ILMN_219891	ILMN_239237	ENSMUSG00000053178	NM_001042670.1	NM_001042670.1		208595	111161291	NM_001042670.1	ENSMUSG00000053178	NP_001036135.1	ILMN_2714874	006420630	S	1226	CAGTGTAGGAGGAGTCGCAGGCAATTGGACAGGTGTGGCACTGGTTCCAG	5	+	4197509-4197558	5qA1	Mus musculus predicted gene, ENSMUSG00000053178 (ENSMUSG00000053178), nuclear gene encoding mitochondrial protein, mRNA.					
Mus musculus	RefSeq	ILMN_188181	ILMN_249769	LOC666904	XM_986932.1	XM_986932.1		666904	94387986	XM_986932.1	LOC666904	XP_992026.1	ILMN_1260103	006520139	S	2032	GTCAGTCCAAGAAGAAGGTGTAGCTTTGTTCCACAGGGACCCAAAACAAG	10	-	14435509-14435558	10qA2	PREDICTED: Mus musculus similar to heat shock protein 8 (LOC666904), mRNA.					
Mus musculus	RefSeq	ILMN_189231	ILMN_189231	TRP63	NM_011641.1	NM_011641.1		22061	6755882	NM_011641.1	Trp63	NP_035771.1	ILMN_1216742	000580064	S	4285	GCCTCTCAGTGGAGAATGGGATTCCTTCACTTGGTGGTGAAGCAGATAGG	16	+	25891796-25891845	16qB1	Mus musculus transformation related protein 63 (Trp63), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby a relatively unspecialized cell acquires specialized features of a polarized epithelial cell. The polarized epithelial cell can be any of the cells within an epithelium where the epithelial sheet is oriented with respect to the planar axis [goid 30859] [evidence IMP]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IMP]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IMP]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell [goid 2347] [evidence IEA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IMP]; The process whose specific outcome is the progression of the urinary bladder over time, from its formation to the mature structure. The urinary bladder is an elastic, muscular sac situated in the anterior part of the pelvic cavity in which urine collects before excretion [goid 60157] [evidence IMP]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IMP]; The separation of the single opening of the digestive, urinary, and reproductive tracts, the cloaca, into multiple isolated openings during development [goid 60197] [evidence IMP]; The process by which the anatomical structures of female genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 48807] [evidence IMP]; The process by which the anatomical structures of the tail are generated and organized. Morphogenesis pertains to the creation of form. The tail is the hindmost part of some animals [goid 35121] [evidence IMP]; The process by which the anatomical structures of the skin are generated and organized. Morphogenesis pertains to the creation of form. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43589] [evidence IMP]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [evidence IMP]; The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [goid 48485] [evidence IMP]; The process whose specific outcome is the progression of an epithelial cell over time, from its formation to the mature structure. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2064] [evidence IDA]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IDA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of keratinocyte differentiation [goid 45617] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IDA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A cell-cell signaling process occurring between the two gastrulation-generated layers of the ectoderm and the mesoderm [goid 7499] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates [goid 1736] [evidence IDA]; The process by which the anatomical structures of polarized epithelium are generated and organized. Morphogenesis pertains to the creation of form. A polarized epithelium is an epithelium where the epithelial sheet is oriented with respect to the planar axis [goid 1738] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	p51/p63; Ket; TAp63; p63; MGC115972; AI462811; Trp53rp1; Tp63; p73L	p51/p63; Ket; TAp63; p63; MGC115972; AI462811; Trp53rp1; Tp63; p73L
Mus musculus	RefSeq	ILMN_197060	ILMN_250871	LOC628916	XR_002713.1	XR_002713.1		628916	94394306	XR_002713.1	LOC628916		ILMN_1247294	000150044	S	1149	TGCTGGACATGACTGAGACAGACACAGAGGTAGATGCCACTTCGAGAGCC				12qE	PREDICTED: Mus musculus similar to serine (or cysteine) peptidase inhibitor, clade A, member 3B (LOC628916), mRNA.					
Mus musculus	RefSeq	ILMN_190242	ILMN_242497	DNAJB12	NM_019965.2	NM_019965.2		56709	31982700	NM_019965.2	Dnajb12	NP_064349.2	ILMN_2644621	003400092	S	1464	GCAAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACG	10	+	59360454-59360503	10qB4	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 12 (Dnajb12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	mDj10; Dj10	mDj10; Dj10
Mus musculus	Riken	ILMN_204461	ILMN_204461	NDRP	ri|B130014I24|PX00157E12|AK044935|1979					AK044935	Ndrp		ILMN_1234871	006130075	S	1631	GGGATCACAGAGACTGAACTGACAGCCCGGAGCCTGCATAGGACTGACCT										
Mus musculus	RefSeq	ILMN_222909	ILMN_222909	UMODL1	NM_177465.4	NM_177465.4		52020	115270978	NM_177465.4	Umodl1	NP_803416.2	ILMN_2756615	006130154	S	4393	GCTTTGACATCCAAGCTGCTCTGTGACTCCTGTTCTCTGACAATGACATC	17	+	31147005-31147054	17qA3.3	Mus musculus uromodulin-like 1 (Umodl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D17Ertd488e	D17Ertd488e
Mus musculus	MEEBO	ILMN_188525	ILMN_188525	CNTN1	scl47598.31_288				6680953	NM_007727	Cntn1		ILMN_1245326	006180243	S	1	GTGGCGGATAGACTCAACTCTCTCATGCACAAATGACTTCTGCTTTTCAT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222772	ILMN_323432	1700120K04RIK	XR_035446.1	XR_035446.1		68232	149258114	XR_035446.1	1700120K04Rik		ILMN_2754497	000540594	S	705	CACGTAGCTAATCCGTAAAAGCGCCACCGGGAGAGCCACCAACACCACTC				7qF3	PREDICTED: Mus musculus RIKEN cDNA 1700120K04 gene (1700120K04Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_200176	ILMN_230544	RTP1	NM_001004151.2	NM_001004151.2		239766	142366216	NM_001004151.2	Rtp1	NP_001004151.1	ILMN_1224640	002030095	S	335	TGCTGGCACACCTGGCAGTCACCCCATGTAGTCATCCTCTTCCACATGTA	16	+	23431248-23431297	16qB1	Mus musculus receptor transporter protein 1 (Rtp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gm604; Gm1766	Gm604; Gm1766
Mus musculus	RefSeq	ILMN_197971	ILMN_230544	RTP1	NM_001004151.2	NM_001004151.2		239766	142366216	NM_001004151.2	Rtp1	NP_001004151.1	ILMN_2530019	000290020	S	395	GCTCAGCGCGCTGGTTCGGTGCGCATGCGTGTGTTCAAGCAGCTCTGCTA	16	+	23431308-23431357	16qB1	Mus musculus receptor transporter protein 1 (Rtp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gm604; Gm1766	Gm604; Gm1766
Mus musculus	RefSeq	ILMN_209312	ILMN_209312	COL20A1	XM_181390.5	XM_181390.5		73368	94367771	XM_181390.5	Col20a1	XP_181390.5	ILMN_1259632	003710131	S	4019	GGGCGGTGCTCCTCCTTCAAGCCCCTTCTTTGTAGCACTTCTAGGTTCAG	2	+	180946877-180946926	2qH4	PREDICTED: Mus musculus collagen, type XX, alpha 1 (Col20a1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217132	ILMN_245927	BC002230	XM_484171.3	XM_484171.3		217827	94393021	XM_484171.3	BC002230	XP_484171.2	ILMN_1248444	003780437	S	3376	AAAGAAGCAAAGGCGTGTTCTACAAGGCCCTCCAGAGCTGTCCTTGGGCA	12	-	101364413-101364462	12qE	PREDICTED: Mus musculus cDNA sequence BC002230, transcript variant 1 (BC002230), mRNA.					
Mus musculus	RefSeq	ILMN_192007	ILMN_245927	BC002230	XM_484171.3	XM_484171.3		217827	94393021	XM_484171.3	BC002230	XP_484171.2	ILMN_1238819	000990142	S	326	TCAGCACCACAGGAAAACCAAGAGGAGGCACGAGCAGTTGAGCAGCAGCG	12	-	101388108-101388157	12qE	PREDICTED: Mus musculus cDNA sequence BC002230, transcript variant 1 (BC002230), mRNA.					
Mus musculus	RefSeq	ILMN_238123	ILMN_238123	LOC554292	NM_001024672.2	NM_001024672.2		554292	110625605	NM_001024672.2	LOC554292	NP_001019843.1	ILMN_2941575	003360735	S	1103	TGTGGCCCCCTTCCTTCACTCAGCAAGCAGTGCAGACCAAGTGTGTTTTC				15qF1	Mus musculus UbiE-YGHL1 fusion protein (LOC554292), mRNA.					
Mus musculus	RefSeq	ILMN_196394	ILMN_217623	CDC42EP1	NM_027219.3	NM_027219.3		104445	146141227	NM_027219.3	Cdc42ep1	NP_081495.1	ILMN_2523947	007610025	S	326	TAAGCAATCAAAGCTGATGCCCGGTCCCCAGGGGGGCACAGGAGCCCCCA				15qE1	Mus musculus CDC42 effector protein (Rho GTPase binding) 1 (Cdc42ep1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MSE55; 1810058K22Rik; Borg5; MGC103067; CEP1; AA980734	MSE55; 1810058K22Rik; Borg5; MGC103067; CEP1; AA980734
Mus musculus	RefSeq	ILMN_217623	ILMN_217623	CDC42EP1	NM_027219.3	NM_027219.3		104445	146141227	NM_027219.3	Cdc42ep1	NP_081495.1	ILMN_1250030	001260072	S	2461	GGGGGGAGCATTAACATGCGTGGAAAATGCTAACAGTTCTTGCTGTGGAA				15qE1	Mus musculus CDC42 effector protein (Rho GTPase binding) 1 (Cdc42ep1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MSE55; 1810058K22Rik; Borg5; MGC103067; CEP1; AA980734	MSE55; 1810058K22Rik; Borg5; MGC103067; CEP1; AA980734
Mus musculus	RefSeq	ILMN_212796	ILMN_310023	TSSK4	NM_029596.1	NM_029596.1		71099	148539916	NM_029596.1	Tssk4	NP_083872.1	ILMN_2630400	006940243	S	882	ACGCCAATCTACCAAGCGTGCCACCATCCTAGATGTCCTCAGGGACCCCT				14qC3	Mus musculus testis-specific serine kinase 4 (Tssk4), mRNA.		The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	4933424F08Rik; 1700020B19Rik	4933424F08Rik; 1700020B19Rik
Mus musculus	RefSeq	ILMN_210404	ILMN_210404	PRSS7	NM_008941.2	NM_008941.2		19146	108936963	NM_008941.2	Prss7	NP_032967.1	ILMN_3140758	004260706	A	3299	GGAGTCCAGTGTGCACTGCCTAATCACCCTGGGGTATATGTCCGAGTCTC	16	-	78954081-78954130	16qC3.1	Mus musculus protease, serine, 7 (enterokinase) (Prss7), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	A130097D21Rik	A130097D21Rik
Mus musculus	RefSeq	ILMN_190429	ILMN_215374	TAF4B	XM_128905.6	XM_128905.6		72504	149269666	XM_128905.6	Taf4b	XP_128905.4	ILMN_2470074	004640762	S	5018	CAGGTTTCAAAACCTCTTATACAGAGAAAAACAAATGTGTGTATCCGAGA	18	+	15058737-15058786	18qA1	PREDICTED: Mus musculus TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf4b), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence TAS]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [evidence TAS]		
Mus musculus	RefSeq	ILMN_215374	ILMN_215374	TAF4B	XM_128905.6	XM_128905.6		72504	149269666	XM_128905.6	Taf4b	XP_128905.4	ILMN_2658714	007330753	S	754	CAGGAGCCAAGACCACAAGTAACATAACTCCAAGACCAGCAGTACCAGCA	18	+	14955485-14955534	18qA1	PREDICTED: Mus musculus TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf4b), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence TAS]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [evidence TAS]		
Mus musculus	RefSeq	ILMN_218382	ILMN_260214	PNPLA7	NM_146251.3	NM_146251.3		241274	142345054	NM_146251.3	Pnpla7	NP_666363.2	ILMN_2695047	001740059	S	4060	GGAACTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCCAGAGCACTG	2	+	24908946-24908995	2qA3	Mus musculus patatin-like phospholipase domain containing 7 (Pnpla7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline. They are important constituents of cell membranes [goid 46470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]	MGC6926; RP23-226M2.4; BC027342; MGC6929; E430013P11Rik	MGC6926; RP23-226M2.4; BC027342; MGC6929; E430013P11Rik
Mus musculus	RefSeq	ILMN_254236	ILMN_254236	SUMO2	NM_133354.1	NM_133354.1		170930	19111163	NM_133354.1	Sumo2	NP_579932.1	ILMN_2980331	000270653	S	302	TGGGCAGCCAATCAACGAAACAGACACACCTGCACAGTTGGAAATGGAGG	11	-	115339845-115339859:115346436-115346470	11qE2	Mus musculus SMT3 suppressor of mif two 3 homolog 2 (yeast) (Sumo2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]	Smt3h2; SUMO-2; Smt3b	Smt3h2; SUMO-2; Smt3b
Mus musculus	Riken	ILMN_206207	ILMN_206207	C130025D13RIK	ri|C130025D13|PX00168E05|AK081510|2687					AK081510	C130025D13Rik		ILMN_1238327	000430735	S	2358	GGCAGTATCCCCAGACTTGTGCATTTTGATGTGGCATTCCCTCTCATAGC										
Mus musculus	RefSeq	ILMN_207477	ILMN_207477	FBXO3	NM_020593.2	NM_020593.2		57443	46877053	NM_020593.2	Fbxo3	NP_065618.1	ILMN_3131522	005670543	A	1049	CGCTACTGGAGGATAACAAACGCTAAAGGGGATGTGGAAGAAGTCCAGGG	2	+	103893574-103893623	2qE2	Mus musculus F-box protein 3 (Fbxo3), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		1200002G09Rik; Fba; 1700026K02Rik; AI046358	1200002G09Rik; Fba; 1700026K02Rik; AI046358
Mus musculus	RefSeq	ILMN_207477	ILMN_207477	FBXO3	NM_020593.2	NM_020593.2		57443	46877053	NM_020593.2	Fbxo3	NP_065618.1	ILMN_2587786	003310500	I	1322	CTAGTGCTGGATATATGACTTTGTTCTAAGACCAACCATCTTTGTTTAGG	2	+	103895202-103895251	2qE2	Mus musculus F-box protein 3 (Fbxo3), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		1200002G09Rik; Fba; 1700026K02Rik; AI046358	1200002G09Rik; Fba; 1700026K02Rik; AI046358
Mus musculus	RefSeq	ILMN_187054	ILMN_259080	HTR4	NM_008313.4	NM_008313.4		15562	145966722	NM_008313.4	Htr4	NP_032339.2	ILMN_2743188	004850538	S	1114	GCTATATCAATTCGGGGTTGAACCCTTTTCTCTATGCCTTCTTGAATAAG				18qE1	Mus musculus 5 hydroxytryptamine (serotonin) receptor 4 (Htr4), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISO]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4935] [evidence IEA]	5-HT<4L>; 5-HT4	5-HT<4L>; 5-HT4
Mus musculus	RefSeq	ILMN_216172	ILMN_216172	ING3	NM_023626.4	NM_023626.4		71777	139948755	NM_023626.4	Ing3	NP_076115.3	ILMN_2685696	007210059	S	197	ATGGACCTACGGGACCGCTTCACGGAGATGCGCGAGATGGATCTGCAGGT	6	+	21900055-21900104	6qA3.1	Mus musculus inhibitor of growth family, member 3 (Ing3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1300013A07Rik; P47ING3	1300013A07Rik; P47ING3
Mus musculus	RefSeq	ILMN_216172	ILMN_216172	ING3	NM_023626.4	NM_023626.4		71777	139948755	NM_023626.4	Ing3	NP_076115.3	ILMN_1213316	002360138	S	3192	CACACAGTGTGACTCTTCTAAACTCATCCACCCTTTGAACTGGCTGGAGG	6	+	21925474-21925523	6qA3.1	Mus musculus inhibitor of growth family, member 3 (Ing3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1300013A07Rik; P47ING3	1300013A07Rik; P47ING3
Mus musculus	RefSeq	ILMN_214189	ILMN_227803	CHPF	NM_001001566.1	NM_001001566.1		74241	48526513	NM_001001566.1	Chpf	NP_001001566.1	ILMN_1258341	005550332	S	2900	GGCTGTAGATGGATTGTTGGAGGAGGTGAAGCTGAGAAAGGAGGGGTACG	1	-	75471216-75471265	1qC4	Mus musculus chondroitin polymerizing factor (Chpf), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP [goid 47238] [evidence IEA]; Catalysis of the reaction: N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,3)-N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50510] [evidence IEA]	AI414328; 1700028N03Rik	AI414328; 1700028N03Rik
Mus musculus	Riken	ILMN_205978	ILMN_205978	D130067I07RIK	ri|D130067I07|PX00185H21|AK051715|1359					AK051715	D130067I07Rik		ILMN_1245517	003310372	S	1131	GTGCTCAGGAGGTAGAGTCAAGAGGATCGTGGGTTCAAGTTCACCCTGAG										
Mus musculus	RefSeq	ILMN_197891	ILMN_197891	LOC242502	XM_143853.3	XM_143853.3			38079226	XM_143853.3	LOC242502		ILMN_2529724	001340669	S	295	CCAGGCAATAAGATGCATGCGAAGGCCAAGTCCCTTAGCAGACGCCTCTC										
Mus musculus	RefSeq	ILMN_210025	ILMN_244298	ACSL6	NM_001033599.1	NM_001033599.1		216739	75992916	NM_001033599.1	Acsl6	NP_001028771.1	ILMN_2621697	000870376	S	1257	CCCCGACCTGTGCGGACGTCCACTTTTCCTACTTGCCTTTAGCACACATG	11	+	54150583-54150632	11qB1.3	Mus musculus acyl-CoA synthetase long-chain family member 6 (Acsl6), transcript variant 4, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC36650; AW050338; LACS; mKIAA0837; A330035H04Rik; Facl6; Lacsl	MGC36650; AW050338; LACS; mKIAA0837; A330035H04Rik; Facl6; Lacsl
Mus musculus	RefSeq	ILMN_210025	ILMN_244298	ACSL6	NM_001033599.1	NM_001033599.1		216739	75992916	NM_001033599.1	Acsl6	NP_001028771.1	ILMN_1236666	001740669	S	2224	GAAAGCCATTCTGGATGACATGGTGATGCTGGGGAAAGAAAGCGGACTGC	11	+	54166501-54166550	11qB1.3	Mus musculus acyl-CoA synthetase long-chain family member 6 (Acsl6), transcript variant 4, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MGC36650; AW050338; LACS; mKIAA0837; A330035H04Rik; Facl6; Lacsl	MGC36650; AW050338; LACS; mKIAA0837; A330035H04Rik; Facl6; Lacsl
Mus musculus	RefSeq	ILMN_198493	ILMN_198493	LOC381245	XM_355187.1	XM_355187.1			38085834	XM_355187.1	LOC381245		ILMN_1251741	001090717	S	372	GTCCATCAGAACTGCAAACAGAGACTATTTCCTTATTGGCCATGACAGGT										
Mus musculus	MEEBO	ILMN_184717	ILMN_184717	C730029A08RIK	scl36608.1.2555_34						C730029A08Rik		ILMN_1250303	000610364	S	20	AGAGGCATTCCCTCTCAGGATGTGAAAACCTCCAGCCTGGACTGTAAGGT										
Mus musculus	RefSeq	ILMN_218814	ILMN_218814	PLSCR3	NM_023564.3	NM_023564.3		70310	141803011	NM_023564.3	Plscr3	NP_076053.1	ILMN_2700524	007150025	S	2675	CGTTACCTTGAGGTTCCGGATAGCAGAAGCCACATCTCCCCCAGTGGTTC	11	+	69665293-69665342	11qB3	Mus musculus phospholipid scramblase 3 (Plscr3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	ESTM3; 2610037N06Rik; X83310; 2210403O21Rik	ESTM3; 2610037N06Rik; X83310; 2210403O21Rik
Mus musculus	MEEBO	ILMN_208676	ILMN_208676	HOMER2	scl026557.1_7	XM_133550.4			38086934	XM_133550.4	Homer2		ILMN_2588474	002650209	S	1533	CAGGCCCTCGGGTGCCTTCTGCTGCGTGGCATTCAGTGTATGTGACTCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor coupled to effectors through GTP-binding proteins [goid 7216] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]; Functions as a physical support bridging the N-methyl-D-aspartate receptor-PSD-95-GKAP complex and the mGluR-Homer complex, which are involved in receptor signaling in synapses [goid 30160] [evidence IDA]		
Mus musculus	Riken	ILMN_204949	ILMN_204949	D330015D10RIK	ri|D330015D10|PX00191H24|AK052264|2149					AK052264	D330015D10Rik		ILMN_2568836	003390358	S	2039	GGTTACCTGATGAATTTCCAGGGAGTGGGGAGGATGCTGGGTTTCCCATC										
Mus musculus	Riken	ILMN_204968	ILMN_204968	A030011F13RIK	ri|A030011F13|PX00063G07|AK037221|2707					AK037221	A030011F13Rik		ILMN_2568990	001470735	S	2431	TGACAGATACACTCCATTCTCAGGGTCATGGGAGAACTCTCCACAGAGGC										
Mus musculus	RefSeq	ILMN_200962	ILMN_322616	D830044I16RIK	XR_035438.1	XR_035438.1		381922	149258099	XR_035438.1	D830044I16Rik		ILMN_1248156	000150608	S	817	GCGGGGCCCTCCACCCTCCGTGGGCAAATGCTACTGAGAAGAAAAGGTTT				7qF3	PREDICTED: Mus musculus RIKEN cDNA D830044I16 gene (D830044I16Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_217375	ILMN_217375	BMP5	NM_007555.3	NM_007555.3		12160	142374687	NM_007555.3	Bmp5	NP_031581.2	ILMN_2682493	006940519	S	1848	CCAGAAGGGTATGCTGCATTTTATTGTGACGGGGAATGTTCTTTTCCACT	9	+	75741516-75741565	9qD	Mus musculus bone morphogenetic protein 5 (Bmp5), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	AU023399; se	AU023399; se
Mus musculus	RefSeq	ILMN_198601	ILMN_198601	LOC245453	XM_141813.2	XM_141813.2			38086381	XM_141813.2	LOC245453		ILMN_1258169	006980753	S	1278	TGAGAAGCCTCAGAGTGACAAGGAGGAGATGAAGGAGGCAGCCAGTTCGC										
Mus musculus	Riken	ILMN_204720	ILMN_204720	A630094K18RIK	ri|A630094K18|PX00148I16|AK042466|2071					AK042466	A630094K18Rik		ILMN_2567119	000430255	S	1875	GTGGCAGTTCTCAGTGGTCTATAACTCCAGTTCCAGGGCCTCTTCTGACC										
Mus musculus	MEEBO	ILMN_222227	ILMN_222227	9530080O11RIK	scl24092.3.1_3	NM_175680.2			31342313	NM_175680.2	9530080O11Rik		ILMN_2746565	004670324	S	852	CCTGCTGAATTTGTAGGAATAAGAAGCTGAAAGAATGAGAGTTGGCAAGA										
Mus musculus	RefSeq	ILMN_192932	ILMN_235161	BC029214	NM_153557.1	NM_153557.1		227622	23956329	NM_153557.1	BC029214	NP_705785.1	ILMN_2768209	001110494	S	825	CCAGGAGCCTGCCTGCAAGGAAAGGGGAGATCTAGGACCCCCTAATCAGA	2	-	25315108-25315157	2qA3	Mus musculus cDNA sequence BC029214 (BC029214), mRNA.				MGC36831; RP23-47P18.9; D930050G13Rik	MGC36831; RP23-47P18.9; D930050G13Rik
Mus musculus	RefSeq	ILMN_193541	ILMN_311215	LOC100045266	XM_001473950.1	XM_001473950.1		100045266	149250332	XM_001473950.1	LOC100045266	XP_001474000.1	ILMN_2498143	005090561	S	288	GGAGTTACCTTCTGTGCGTTCTCTCCTAAACCTACACGTTATTCACGACT					PREDICTED: Mus musculus hypothetical protein LOC100045266 (LOC100045266), mRNA.					
Mus musculus	RefSeq	ILMN_196913	ILMN_196913	LOC381265	XM_358538.1	XM_358538.1			38049540	XM_358538.1	LOC381265		ILMN_1240183	007040209	S	297	CTGTACGCTCTCTTCTGCCGTCAGCTACTTGTGTGGAGGCATCGGTGTCC										
Mus musculus	Riken	ILMN_202637	ILMN_202637	3732412D22RIK	ri|3732412D22|PX00093C03|AK019457|2456					AK019457	3732412D22Rik		ILMN_1216840	006980431	S	970	CAGTAGTGTCTAGTCATGCTTTCTCTAAGCCATGCTGTGGCCCAGGCGCC										
Mus musculus	RefSeq	ILMN_211616	ILMN_211616	GMPR2	NM_177992.2	NM_177992.2		105446	117553609	NM_177992.2	Gmpr2	NP_818773.1	ILMN_2846317	000630093	S	1458	GGCAGCCCTTGGTCTGGAAAGGGAAGGCTGCGGGAATCATGTTAAGCAGC	14	+	56297502-56297551	14qC3	Mus musculus guanosine monophosphate reductase 2 (Gmpr2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [evidence ISA]; The chemical reactions and pathways resulting in the breakdown of GMP, guanosine monophosphate [goid 46038] [evidence ISA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NH3 + NADP+ = guanosine 5'-phosphate + NADPH + H+ [goid 3920] [evidence ISA]	1810008P16Rik; AA959850; 5730544D12Rik	1810008P16Rik; AA959850; 5730544D12Rik
Mus musculus	RefSeq	ILMN_218604	ILMN_218604	LY6G5C	NM_148947.1	NM_148947.1		114652	22507360	NM_148947.1	Ly6g5c	NP_683749.1	ILMN_2697910	003190593	S	362	CCCCGGTGTTTGGCTTTTGGATATTCTATCAGTGTTGCTTCCTGGATTTC	17	+	35247731-35247776:35248556-35248559	17qB1	Mus musculus lymphocyte antigen 6 complex, locus G5C (Ly6g5c), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			G5c; NG33	G5c; NG33
Mus musculus	RefSeq	ILMN_189279	ILMN_189279	ADAMTSL4	NM_144899.2	NM_144899.2		229595	30089696	NM_144899.2	Adamtsl4	NP_659148.2	ILMN_2459899	000130192	S	3743	GGGTGAAAAAGAGAAACGTCAGCATAAGACATCCTAGCCCCAGTCGCCAC	3	-	95480190-95480239	3qF2.1	Mus musculus ADAMTS-like 4 (Adamtsl4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	MGC28749; Tsrc1	MGC28749; Tsrc1
Mus musculus	RefSeq	ILMN_223385	ILMN_223385	SLC22A2	NM_013667.2	NM_013667.2		20518	118130849	NM_013667.2	Slc22a2	NP_038695.1	ILMN_2763366	004210014	S	1819	TCTTCCCCTCCCGCGAAAGCCACACAACCCAACCTCACTTACCCCTGAAT	17	+	12821035-12821084	17qA1	Mus musculus solute carrier family 22 (organic cation transporter), member 2 (Slc22a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IDA]; The directed movement of organic cations into, out of, within or between cells. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage [goid 15695] [evidence ISO]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [evidence IDA]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [evidence ISO]	Orct2; MGC18339; Oct2	Orct2; MGC18339; Oct2
Mus musculus	MEEBO	ILMN_185143	ILMN_185143	GGTLA1	scl38759.9_552				31542890	NM_011820	Ggtla1		ILMN_1221745	000450717	S	1	CCCCCTGAGCCTTATAGAATAGCAACTGATGTTATATATCTGAGAGAGGC										
Mus musculus	RefSeq	ILMN_207363	ILMN_310449	MARVELD1	XR_035422.1	XR_035422.1		277010	149270553	XR_035422.1	Marveld1		ILMN_1259554	004670551	S	2647	AGTCTCCTTGGTGATGAGTGATGGCGGTTGGCTTTGAACCCTCACAGTCC	19	+	42224525-42224574	19qC3	PREDICTED: Mus musculus MARVEL (membrane-associating) domain containing 1 (Marveld1), misc RNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_221025	ILMN_221025	ABAT	NM_172961.2	NM_172961.2		268860	37202120	NM_172961.2	Abat	NP_766549.2	ILMN_2752146	002470411	S	20	ATCGGAAGGTGATCGCGCAAGTCCGGCCCGCGGATCGCAGCCTGTAGATC	16	+	8513601-8513650	16qA1	Mus musculus 4-aminobutyrate aminotransferase (Abat), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]; The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9448] [evidence IEA]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: 4-aminobutanoate + amino group acceptor = succinate semialdehyde + amino acid [goid 3867] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-oxoglutarate + (S)-3-amino-2-methylpropanoate = L-glutamate + methylmalonate-semialdehyde [goid 47298] [evidence IEA]	X61497; 9630038C02Rik; I54; AI255750; GABA-T	X61497; 9630038C02Rik; I54; AI255750; GABA-T
Mus musculus	RefSeq	ILMN_221025	ILMN_221025	ABAT	NM_172961.2	NM_172961.2		268860	37202120	NM_172961.2	Abat	NP_766549.2	ILMN_1248367	006020181	S	4453	CAGTGCCAATAAGGGGTGAGGACACTAACAGTGTAACTGGTGACCACGTG	16	+	8621538-8621587	16qA1	Mus musculus 4-aminobutyrate aminotransferase (Abat), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]; The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9448] [evidence IEA]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: 4-aminobutanoate + amino group acceptor = succinate semialdehyde + amino acid [goid 3867] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-oxoglutarate + (S)-3-amino-2-methylpropanoate = L-glutamate + methylmalonate-semialdehyde [goid 47298] [evidence IEA]	X61497; 9630038C02Rik; I54; AI255750; GABA-T	X61497; 9630038C02Rik; I54; AI255750; GABA-T
Mus musculus	RefSeq	ILMN_213098	ILMN_221025	ABAT	NM_172961.2	NM_172961.2		268860	37202120	NM_172961.2	Abat	NP_766549.2	ILMN_1259037	001050458	S	2080	CACGAGAGGGGCATGAAGCTATGGACTCGGTAAGAAGTGACAAGAGCTTG	16	+	8619165-8619214	16qA1	Mus musculus 4-aminobutyrate aminotransferase (Abat), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]; The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9448] [evidence IEA]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: 4-aminobutanoate + amino group acceptor = succinate semialdehyde + amino acid [goid 3867] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-oxoglutarate + (S)-3-amino-2-methylpropanoate = L-glutamate + methylmalonate-semialdehyde [goid 47298] [evidence IEA]	X61497; 9630038C02Rik; I54; AI255750; GABA-T	X61497; 9630038C02Rik; I54; AI255750; GABA-T
Mus musculus	RefSeq	ILMN_221025	ILMN_221025	ABAT	NM_172961.2	NM_172961.2		268860	37202120	NM_172961.2	Abat	NP_766549.2	ILMN_2925947	002120601	S	4171	GTCTCTAGCCAGGCTTGTCAGTTGTGCAGGAAACAAGGCCTGGTCCTAGC	16	+	8621256-8621305	16qA1	Mus musculus 4-aminobutyrate aminotransferase (Abat), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]; The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9448] [evidence IEA]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: 4-aminobutanoate + amino group acceptor = succinate semialdehyde + amino acid [goid 3867] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 2-oxoglutarate + (S)-3-amino-2-methylpropanoate = L-glutamate + methylmalonate-semialdehyde [goid 47298] [evidence IEA]	X61497; 9630038C02Rik; I54; AI255750; GABA-T	X61497; 9630038C02Rik; I54; AI255750; GABA-T
Mus musculus	RefSeq	ILMN_244720	ILMN_244720	GPR17	NM_001025381.1	NM_001025381.1		574402	71725393	NM_001025381.1	Gpr17	NP_001020552.1	ILMN_3160970	001410762	S	4995	CAGCCAGTGTTTAACCAGTCCTTGCCTCTGGGTCTGCCAGATGCTGGGGT	18	-	32102801-32102850	18qB1	Mus musculus G protein-coupled receptor 17 (Gpr17), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	MGC99918	MGC99918
Mus musculus	MEEBO	ILMN_220931	ILMN_220931	EEF1A1	scl013627.1_210	XM_203909.2			38089918	XM_203909.2	Eef1a1		ILMN_1244894	004640142	S	1541	GACTGGTTAATGATAACAATGCATCGTAAAACCTTCAGAAGGAAAGAATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199407	ILMN_199407	OLFR1109	NM_146766.2	NM_146766.2		258762	110671318	NM_146766.2	Olfr1109	NP_666977.2	ILMN_2772963	001660168	S	372	GGCAATTGTAAACCCCTTAATGTATACAGTTATTATGACATTCAGCATCT	2	-	86933131-86933180	2qD	Mus musculus olfactory receptor 1109 (Olfr1109), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR172-5	MOR172-5
Mus musculus	Riken	ILMN_201739	ILMN_201739	2610524F24RIK	ri|2610524F24|ZX00045B06|AK012141|1612					AK012141	2610524F24Rik		ILMN_2544200	001400072	S	817	AAAAACAGCACAGGCAGAGATCCTGGAGTGTTTCGCTCGCCAGCAGCCAC										
Mus musculus	RefSeq	ILMN_237931	ILMN_237931	DGKB	NM_178681.3	NM_178681.3		217480	83816898	NM_178681.3	Dgkb	NP_848796.2	ILMN_2856771	003360689	S	5119	CTGACGTGCTTGCCCTTTGAGTACACTACTCCTGGGGTTTGGAAAGTAGT	12	+	39143367-39143416	12qA3	Mus musculus diacylglycerol kinase, beta (Dgkb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IDA]	90kda; mKIAA0718; DGK-beta; C630029D13Rik; DAGK2; 6430574F24; DGK	90kda; mKIAA0718; DGK-beta; C630029D13Rik; DAGK2; 6430574F24; DGK
Mus musculus	RefSeq	ILMN_252909	ILMN_252909	PIRA11	NM_011088.1	NM_011088.1		18724	75832024	NM_011088.1	Pira11	NP_035218.1	ILMN_3152792	004280187	A	1513	TCCTCTGAGTGGTCAGCCTCCAGTGAGCCCCTGGACATCCTGATCACAGG	7	-	3845884-3845885:3846145-3846192	7qA1	Mus musculus paired-Ig-like receptor A11 (Pira11), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	p91C; MGC123395; MGC123394	p91C; MGC123395; MGC123394
Mus musculus	RefSeq	ILMN_252909	ILMN_252909	PIRA11	NM_011088.1	NM_011088.1		18724	75832024	NM_011088.1	Pira11	NP_035218.1	ILMN_3073899	006520349	I	703	CCAGGATCTGTGATCGCCTCCAAAAGAGCAATGACCATCTGGTGTCAGGG	7	-	3847306-3847355	7qA1	Mus musculus paired-Ig-like receptor A11 (Pira11), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	p91C; MGC123395; MGC123394	p91C; MGC123395; MGC123394
Mus musculus	RefSeq	ILMN_198750	ILMN_198750	EG278167	XM_205261.1	XM_205261.1		278167	25030909	XM_205261.1	EG278167	XP_205261.1	ILMN_1222169	006520735	S	984	TGCTGCCAGGATTCCCTCACATGCCCAAGCTAGCAGCTCCTCCCACATTT	X	+	88638822-88638871	XqC1	PREDICTED: Mus musculus predicted gene, EG278167 (EG278167), mRNA.					
Mus musculus	Riken	ILMN_205719	ILMN_205719	9430047F21RIK	ri|9430047F21|PX00109O24|AK034848|3478					AK034848	9430047F21Rik		ILMN_1236820	002970743	S	3219	GGCCAATGATGAGGAGCATGGGGTTTCTGACCGAGGACAGTGATTAAACC										
Mus musculus	RefSeq	ILMN_209928	ILMN_209928	STEAP4	NM_054098.3	NM_054098.3		117167	118131114	NM_054098.3	Steap4	NP_473439.2	ILMN_2657297	006180671	S	2908	TGTACATGATATCATACATTGCTCACAATCCAGGGTTTTTTATATAAAGC	5	+	7981981-7982030	5qA1	Mus musculus STEAP family member 4 (Steap4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 11443137] [evidence IEP]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	Tiarp; 1110021O17Rik; dudulin 4; Tnfaip9; AI481214	Tiarp; 1110021O17Rik; dudulin 4; Tnfaip9; AI481214
Mus musculus	RefSeq	ILMN_209928	ILMN_209928	STEAP4	NM_054098.3	NM_054098.3		117167	118131114	NM_054098.3	Steap4	NP_473439.2	ILMN_1222640	006590544	S	805	CGTGTCTTTCCTATAACAGCACTGATCCTGCTTGCCTTGGTGTACCTCCC	5	+	7976771-7976820	5qA1	Mus musculus STEAP family member 4 (Steap4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 11443137] [evidence IEP]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	Tiarp; 1110021O17Rik; dudulin 4; Tnfaip9; AI481214	Tiarp; 1110021O17Rik; dudulin 4; Tnfaip9; AI481214
Mus musculus	RefSeq	ILMN_197252	ILMN_197252	LOC228025	XM_149164.1	XM_149164.1			20837194	XM_149164.1	LOC228025		ILMN_1250886	002190575	S	370	GGACCAAGTAGCAACACCTGTGAGGAGGAAAGGTCCAGAGGAAAATCTCC										
Mus musculus	MEEBO	ILMN_192625	ILMN_192625	1700027A07RIK	scl46980.1.1_0						1700027A07Rik		ILMN_2489829	002070221	S	7	GGAACCATTGAGGCTCATTAGAAACATGTGGATGTGATGGAGCCAGGGCT										
Mus musculus	RefSeq	ILMN_199472	ILMN_199472	LOC383533	XM_357109.1	XM_357109.1			38049699	XM_357109.1	LOC383533		ILMN_2535331	004540553	S	271	ACTCCTCTCAGGGGTGAGAACTCGGGAACACCTGCTGTGCAGACTCCCTC										
Mus musculus	Riken	ILMN_206894	ILMN_206894	E030040P03RIK	ri|E030040P03|PX00206M17|AK087270|2577					AK087270	E030040P03Rik		ILMN_1237935	007570152	S	2344	GGACCGCTGCCAGATGTAAACCAACTCAAAGAATACCTCACCAAGCGGGG										
Mus musculus	RefSeq	ILMN_185549	ILMN_235850	FAM171B	NM_175514.2	NM_175514.2		241520	141803219	NM_175514.2	Fam171b	NP_780723.1	ILMN_1212907	007150026	S	3179	GCGACCTTAGTTGACAGCTGGGCGGAGGCTTTGACTTTTAAGGTTCACGA	2	+	83721300-83721349	2qD	Mus musculus family with sequence similarity 171, member B (Fam171b), mRNA.				RP23-141N19.4	RP23-141N19.4
Mus musculus	RefSeq	ILMN_223883	ILMN_260140	OSR2	NM_054049.2	NM_054049.2		107587	133893325	NM_054049.2	Osr2	NP_473390.1	ILMN_2770979	004070561	S	1569	GAGCTCTGTACATAATATTGTGGGTCTTCGTCCGGTCGTTCTGTCTGTTT	15	+	35232919-35232968	15qB3.1	Mus musculus odd-skipped related 2 (Drosophila) (Osr2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	5430409I15Rik	5430409I15Rik
Mus musculus	RefSeq	ILMN_196811	ILMN_196811	LOC243362	XM_144656.1	XM_144656.1			20850289	XM_144656.1	LOC243362		ILMN_1234743	002100575	S	4230	CCCACCACTCAACACTGAAGGGGAGTGGAAATGTAAGGCTCCCATGGACC										
Mus musculus	Riken	ILMN_202755	ILMN_202755	2700018L05RIK	ri|2700018L05|ZX00048D10|AK027261|984					AK027261	2700018L05Rik		ILMN_2552038	000540209	S	590	GAAGGTTGCCGGGGAGGAGGGGGGGGTTGAGGATTAGTTGCCTTCCTTAA										
Mus musculus	RefSeq	ILMN_196165	ILMN_253387	NUP155	NM_133227.2	NM_133227.2		170762	31559997	NM_133227.2	Nup155	NP_573490.2	ILMN_1235035	003190239	S	73	CCACGATTGCCGACATGCCATCGGTGCTGGGCTCTATGATGGTGGCCTCT	15	+	8059432-8059445:8059446-8059481	15qA1	Mus musculus nucleoporin 155 (Nup155), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the nuclear pore complex [goid 17056] [evidence IEA]	D930027M19Rik; mKIAA0791	D930027M19Rik; mKIAA0791
Mus musculus	RefSeq	ILMN_253387	ILMN_253387	NUP155	NM_133227.2	NM_133227.2		170762	31559997	NM_133227.2	Nup155	NP_573490.2	ILMN_2981935	006510528	S	4701	AGTCCAGCACTTGGGGAAGCAGTGGCAGGCGGCTCTTTAGAACTCACTGA	15	+	8108203-8108252	15qA1	Mus musculus nucleoporin 155 (Nup155), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the nuclear pore complex [goid 17056] [evidence IEA]	D930027M19Rik; mKIAA0791	D930027M19Rik; mKIAA0791
Mus musculus	RefSeq	ILMN_196165	ILMN_253387	NUP155	NM_133227.2	NM_133227.2		170762	31559997	NM_133227.2	Nup155	NP_573490.2	ILMN_2695281	004250056	S	5179	ACCACAGCTCTACAGGGACTACTGTTTCCTTAGAACCCTCACTGTCTAAC	15	+	8108681-8108730	15qA1	Mus musculus nucleoporin 155 (Nup155), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the nuclear pore complex [goid 17056] [evidence IEA]	D930027M19Rik; mKIAA0791	D930027M19Rik; mKIAA0791
Mus musculus	RefSeq	ILMN_251450	ILMN_251450	1700080E11RIK	NM_028562.1	NM_028562.1		73532	13386321	NM_028562.1	1700080E11Rik	NP_082838.1	ILMN_2864695	002750544	S	820	GCTTTTGGGGCCTTGGAGATGAGAGCTGACACCAGATTAAAAGGCAGAAC	9	-	105001445-105001494	9qF1	Mus musculus RIKEN cDNA 1700080E11 gene (1700080E11Rik), mRNA.				AI429110	AI429110
Mus musculus	RefSeq	ILMN_194014	ILMN_194014	UAP1	NM_133806.4	NM_133806.4		107652	146149212	NM_133806.4	Uap1	NP_598567.2	ILMN_2502542	006840112	S	1815	GGGCCACATAGGGAGCCGTTGTTTTGGTAGATCAATTGTGAACCTGTGGG				1qH3	Mus musculus UDP-N-acetylglucosamine pyrophosphorylase 1 (Uap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: UTP + N-acetyl-alpha-D-glucosamine 1-phosphate = diphosphate + UDP-N-acetyl-D-glucosamine [goid 3977] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AGX1; AGX-2; AgX; AA437972; AGX-1; SPAG2; ESTM38; AA420407	AGX1; AGX-2; AgX; AA437972; AGX-1; SPAG2; ESTM38; AA420407
Mus musculus	RefSeq	ILMN_220160	ILMN_220160	POU2F1	NM_198934.2	NM_198934.2		18986	114431257	NM_198934.2	Pou2f1	NP_945152.2	ILMN_2718359	000650678	S	1621	TGCAGCTGGGAAGTGCTTAGGAGTCTACCAGACAGAGTCACCACCACAGC	1	-	167813179-167813228	1qH2.3	Mus musculus POU domain, class 2, transcription factor 1 (Pou2f1), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens [goid 60235] [evidence IGI]; The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity [goid 30910] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	Otf-1; Otf1; 2810482H01Rik; Oct-1	Otf-1; Otf1; 2810482H01Rik; Oct-1
Mus musculus	RefSeq	ILMN_227354	ILMN_227354	MARS	NM_001003913.1	NM_001003913.1		216443	51491851	NM_001003913.1	Mars	NP_001003913.1	ILMN_2828687	002940017	S	2445	TTGAAAATTTGAGGCAGCGCTTTGGAGGGGGTCAGGCTAAAGGCTCCCCC	10	-	126733674-126733689:126733929-126733962	10qD3	Mus musculus methionine-tRNA synthetase (Mars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The process of coupling methionine to methionyl-tRNA, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6431] [evidence ISO]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [evidence ISO]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met) [goid 4825] [evidence ISO]	MTRNS; MetRS; MGC90747	MTRNS; MetRS; MGC90747
Mus musculus	Riken	ILMN_202065	ILMN_202065	2610304I02RIK	ri|2610304I02|ZX00062E13|AK011982|1481					AK011982	2610304I02Rik		ILMN_2546725	005700022	S	1116	GTTGGTTAAGTCAGGAGATTGCTGGGGCTGCTTATGACCTACAAGCCATC										
Mus musculus	RefSeq	ILMN_212180	ILMN_212180	APPBP1	NM_144931.1	NM_144931.1		234664	21450340	NM_144931.1	Appbp1	NP_659180.1	ILMN_2955356	000150021	S	1488	GTCCATGAATTTTGCCGGTACGGAGCTGCTGAGCCACACACCATTGCTGC	8	-	107402337-107402378:107402470-107402477	8qD3	Mus musculus amyloid beta precursor protein binding protein 1 (Appbp1), mRNA.				59kDa; MGC36437; MGC36630; MGC29435	59kDa; MGC36437; MGC36630; MGC29435
Mus musculus	RefSeq	ILMN_212180	ILMN_212180	APPBP1	NM_144931.1	NM_144931.1		234664	21450340	NM_144931.1	Appbp1	NP_659180.1	ILMN_2955362	003400494	S	1619	TAGTGGTATGTCACAAACTTCTGCAACTTTCCAGTTGTAGAATAAGCACC	8	-	107400274-107400286:107400287-107400323	8qD3	Mus musculus amyloid beta precursor protein binding protein 1 (Appbp1), mRNA.				59kDa; MGC36437; MGC36630; MGC29435	59kDa; MGC36437; MGC36630; MGC29435
Mus musculus	RefSeq	ILMN_222434	ILMN_222434	DEFB5	NM_030734.2	NM_030734.2		81007	118200342	NM_030734.2	Defb5	NP_109659.2	ILMN_1232541	002030445	S	85	CCAGTAAGTTGCTGTATGATTGGAGGCATATGCAGGTATCTGTGCAAGGG	8	+	19250718-19250767	8qA1.3	Mus musculus defensin beta 5 (Defb5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Mus musculus	Riken	ILMN_204149	ILMN_204149	PON1	ri|C730017A17|PX00086J22|AK050119|1546					AK050119	Pon1		ILMN_1258736	005090327	S	1483	GGCCATGCTCGGTTTACAAAGTGAAGTTGAGGCCCAGGTAACACAAACTC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]	Catalysis of the reaction: a phenyl acetate + H2O = a phenol + acetate [goid 4064] [evidence IMP]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: aryl dialkyl phosphate + H2O = dialkyl phosphate + an aryl alcohol [goid 4063] [evidence IEA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence TAS]		
Mus musculus	RefSeq	ILMN_210362	ILMN_210362	GGT7	NM_144786.1	NM_144786.1		207182	21450126	NM_144786.1	Ggt7	NP_659035.1	ILMN_1213289	000520753	S	2168	TCTCCAACTGGAGGCCTTTGGTGGGAATGATGACATCAGTGTCCATGACC	2	-	155316490-155316539	2qH1	Mus musculus gamma-glutamyltransferase 7 (Ggt7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IEA]	6330563L03Rik; 1110017C11Rik; MGC12004	6330563L03Rik; 1110017C11Rik; MGC12004
Mus musculus	RefSeq	ILMN_219562	ILMN_242897	1700027N10RIK	NM_029338.3	NM_029338.3		75564	146141160	NM_029338.3	1700027N10Rik	NP_083614.1	ILMN_2775220	001170431	S	793	CCTTCTACCACGCTCCTCGCACCAAGAACTATGGCTACATCTACGTAGGC				17qC	Mus musculus RIKEN cDNA 1700027N10 gene (1700027N10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_246331	ILMN_246331	4930434E21RIK	NM_029440.3	NM_029440.3		381693	119508423	NM_029440.3	4930434E21Rik	NP_083716.2	ILMN_2886520	004850672	S	1953	GACCACGGGACAGAGGAGAAGGACCCGTGTGAGGCTGAAAAGACCCCTAA	5	+	150401940-150401972:150408864-150408880	5qG3	Mus musculus RIKEN cDNA 4930434E21 gene (4930434E21Rik), mRNA.					
Mus musculus	RefSeq	ILMN_221235	ILMN_246331	4930434E21RIK	NM_029440.3	NM_029440.3		381693	119508423	NM_029440.3	4930434E21Rik	NP_083716.2	ILMN_1225836	006480280	S	2016	GAAGGTCTCACTGTTGAAGCAGAGGCGAAAGCAGATAAGAGCCGATGGGC	5	+	150408894-150408943	5qG3	Mus musculus RIKEN cDNA 4930434E21 gene (4930434E21Rik), mRNA.					
Mus musculus	Riken	ILMN_202827	ILMN_202827	5330429D05RIK	ri|5330429D05|PX00054K03|AK030541|1606					AK030541	5330429D05Rik		ILMN_2552605	000940209	S	1255	GTTGACCGACGTCGTTGTGAACACCTAGCACATAGCACAAGGAACTTCTT										
Mus musculus	MEEBO	ILMN_188178	ILMN_188178	SCL0002657.1_5	scl0002657.1_5	BC050854.1			29747986	BC050854.1	scl0002657.1_5		ILMN_1241511	000160768	S	1	GCTGCTGATTTGCTCATTTACGTACCCGCGGTGCTTTTGTACTGTTACTC										
Mus musculus	RefSeq	ILMN_214794	ILMN_224926	KCNIP2	NM_030716.2	NM_030716.2		80906	21746188	NM_030716.2	Kcnip2	NP_109641.2	ILMN_2680959	000510471	S	93	TAAAAAAGCCCTGAAGCAGCGTTTCCTCAAGCTGCTGCCGTGCTGCGGGC	19	-	45871607-45871656	19qC3	Mus musculus Kv channel-interacting protein 2 (Kcnip2), transcript variant b, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	KChIP2b; AI851528; KChIP2a; KChIP2	KChIP2b; AI851528; KChIP2a; KChIP2
Mus musculus	Riken	ILMN_206125	ILMN_206125	FBXO18	ri|C630015E16|PX00084E10|AK083118|4120					AK083118	Fbxo18		ILMN_1256320	001410474	S	3824	GTCCCTGTGGACACAACGGCCCATCAGCATCATATACGAGGTGTCCTAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223728	ILMN_223728	OSCAR	NM_175632.2	NM_175632.2		232790	31342247	NM_175632.2	Oscar	NP_783440.1	ILMN_1215466	004220373	S	1571	GTACTCATTCTCTCTTCTCTTCCAATGTTTTGGGGGTTTGTTCGTTTGTT	7	-	3561617-3561666	7qA1	Mus musculus osteoclast associated receptor (Oscar), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mOSCAR-M1; mOSCAR; mOSCAR-M3; mOSCAR-M2	mOSCAR-M1; mOSCAR; mOSCAR-M3; mOSCAR-M2
Mus musculus	RefSeq	ILMN_201550	ILMN_248143	LOC677215	XM_001001411.2	XM_001001411.2		677215	149252201	XM_001001411.2	LOC677215	XP_001001411.1	ILMN_2702561	005870475	S	194	GATCAATGCCCTCATTAAAGCAGCTGGTGTCAGCGTCGAACCTTTCTGGC					PREDICTED: Mus musculus similar to acidic ribosomal phosphoprotein P1, transcript variant 1 (LOC677215), mRNA.					
Mus musculus	MEEBO	ILMN_185179	ILMN_185179	SCL0002137.1_21	scl0002137.1_21	AK016726.1			12855619	AK016726.1	scl0002137.1_21		ILMN_2424853	003780075	S	17	AGCAAGCCCGCAGCTCCTTCACGTCAGCCGAACAGAGACTTCAGGAGTGT										
Mus musculus	RefSeq	ILMN_201380	ILMN_201380	LOC382148	XM_356243.1	XM_356243.1			38093421	XM_356243.1	LOC382148		ILMN_1258541	004250128	S	772	CCTGAGAGCCAGGAGCGTGTCCAGCACTGGATCCAGAGCCCAAGAACCTG										
Mus musculus	RefSeq	ILMN_249505	ILMN_249505	DHX15	NM_001042620.1	NM_001042620.1		13204	110835725	NM_001042620.1	Dhx15	NP_001036085.1	ILMN_3145527	004540131	A	1977	CCACGGAGGCCAAGAAAGCTGCAGATGAGGCCAAGATGAGATTTGCCCAC	5	-	52548745-52548794	5qC1	Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 15 (Dhx15), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC117685; mDEAH9; HRH2; DBP1; Ddx15	MGC117685; mDEAH9; HRH2; DBP1; Ddx15
Mus musculus	RefSeq	ILMN_214240	ILMN_214240	PRKRIR	NM_028410.1	NM_028410.1		72981	33469018	NM_028410.1	Prkrir	NP_082686.1	ILMN_1237939	005960358	S	3270	GCAGCTGACTTGTCTGTTGTCTCCTTACATGACTGTGTCTGCTGCCTTGG	7	+	105866379-105866428	7qE2	Mus musculus protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) (Prkrir), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	Dap4; MGC31389; 2900052B10Rik; Rpkrir	Dap4; MGC31389; 2900052B10Rik; Rpkrir
Mus musculus	RefSeq	ILMN_208804	ILMN_320707	LOC674115	XM_001472405.1	XM_001472405.1		674115	149274429	XM_001472405.1	LOC674115	XP_001472455.1	ILMN_2589706	001820082	S	542	CCTAGTCAAAACATAACACCTGCAATCAAGGATCCAAGGCACCTGTTGAC					PREDICTED: Mus musculus similar to TDPOZ1 (LOC674115), mRNA.					
Mus musculus	RefSeq	ILMN_257862	ILMN_257862	GM50	NM_001007573.1	NM_001007573.1		215090	56090559	NM_001007573.1	Gm50	NP_001007574.1	ILMN_3131846	004480086	A	2476	TCACTGCAAGGACAACCAGCCCAGTCACCGACACTTAACCCCCGAGACAG	4	-	124532684-124532733	4qD2.2	Mus musculus gene model 50, (NCBI) (Gm50), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC86147	MGC86147
Mus musculus	RefSeq	ILMN_257862	ILMN_257862	GM50	NM_001007573.1	NM_001007573.1		215090	56090559	NM_001007573.1	Gm50	NP_001007574.1	ILMN_3055083	006350082	I	509	CCCCGACGTGCTACGAGAGCACATGACCCAGCTCAAAGAAGCTGCCATTG	4	-	124537698-124537717:124538877-124538906	4qD2.2	Mus musculus gene model 50, (NCBI) (Gm50), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC86147	MGC86147
Mus musculus	Riken	ILMN_202774	ILMN_202774	SLC13A1	ri|5031423P06|PX00037O19|AK019876|2602					AK019876	Slc13a1		ILMN_1227247	003440484	S	2517	CCAGAGGTAAAACAAAAGCAGGGGATTCTCTTGGGTGGATGGACCCTTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IDA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IDA]		
Mus musculus	MEEBO	ILMN_193677	ILMN_193677	MKIAA1429	scl0002790.1_107				28972749	AK122509	mKIAA1429		ILMN_1257509	000610209	S	12	CTGAGGGTGAGATGAAACTGAAGCGAGTTGGAAGTGTGGGGTAATGTTTG										
Mus musculus	RefSeq	ILMN_197593	ILMN_197593	LOC195281	XM_111577.4	XM_111577.4		195281	38076725	XM_111577.4	LOC195281	XP_111577.4	ILMN_2918845	006840026	S	694	CCTGGCGAAGGCGAGGGTGGGGCGGGCAGTGAGAAGCCCACTGTACTGAA	14	+	52424791-52424840		PREDICTED: Mus musculus similar to Proton-associated sugar transporter A (PAST-A) (Solute carrier family 45 member 1) (Deleted in neuroblastoma 5 protein) (DNb-5) (LOC195281), mRNA.					
Mus musculus	RefSeq	ILMN_212955	ILMN_212955	HEXIM1	NM_138753.2	NM_138753.2		192231	124301215	NM_138753.2	Hexim1	NP_620092.1	ILMN_2631994	000380484	S	3294	CCTTCAAAACCAAGCTTGCTGGTTCTATTCTGGCAGGTGGTCTCCTGCAG	11	+	102980932-102980981	11qE1	Mus musculus hexamethylene bis-acetamide inducible 1 (Hexim1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]	CLP-1; Clp1; 7330426E13Rik; HIS1	CLP-1; Clp1; 7330426E13Rik; HIS1
Mus musculus	RefSeq	ILMN_234875	ILMN_234875	V1RC23	NM_134178.1	NM_134178.1		171196	21717676	NM_134178.1	V1rc23	NP_598939.1	ILMN_3004978	003170520	S	245	CTGGTAGGGTGATGAGAGGACTCTCTATGTGCATCACATGCCTCCTGGGT	6	-	57850690-57850739	6qB3	Mus musculus vomeronasal 1 receptor, C23 (V1rc23), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]		
Mus musculus	RefSeq	ILMN_234875	ILMN_234875	V1RC23	NM_134178.1	NM_134178.1		171196	21717676	NM_134178.1	V1rc23	NP_598939.1	ILMN_3004983	003130674	S	391	TGGTTTCTTAATTTCTCGATCAATAGTCACATGATAGTCTATGTTGGTGG	6	-	57850544-57850593	6qB3	Mus musculus vomeronasal 1 receptor, C23 (V1rc23), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]		
Mus musculus	RefSeq	ILMN_210385	ILMN_210385	RSL1D1	NM_025546.1	NM_025546.1		66409	30794469	NM_025546.1	Rsl1d1	NP_079822.1	ILMN_2605094	002230040	S	1300	GCCAGAGGCCAGTTCCTTCTCTACTCCCAGGAAATCTGGAAAGAAGGCTT	16	-	11107104-11107153	16qA1	Mus musculus ribosomal L1 domain containing 1 (Rsl1d1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]			pBK1; C76439; 2410005K20Rik	pBK1; C76439; 2410005K20Rik
Mus musculus	Riken	ILMN_204015	ILMN_204015	ANGPTL2	ri|A630044F14|PX00145D18|AK041888|3560					AK041888	Angptl2		ILMN_1216965	007040458	S	3356	GCCTCCTAGAAGGTCAGGGAACCTTACAAGAGCATCTGCCTCAGTGTGAG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Mus musculus	Riken	ILMN_207053	ILMN_207053	E430021P16RIK	ri|E430021P16|PX00099L17|AK088636|1392					AK088636	E430021P16Rik		ILMN_2584685	006040072	S	1001	CCTCCCAAGCTTACAGTTAGCAGGCAGCTTTTGCTCACTCATCCTTAGCC										
Mus musculus	MEEBO	ILMN_191808	ILMN_191808	WINS2	scl32569.2.7_46				22779908	NM_152815	Wins2		ILMN_1227988	002710301	S	1	TGCTCTTCGGTAGGAGATGTCTCCTGATGCAGATGTGCTAAAGAGGCTTC										
Mus musculus	MEEBO	ILMN_191808	ILMN_191808	WINS2	scl32569.2.7_46				22779908	NM_152815	Wins2		ILMN_1239583	000150594	S	8	TAACCCAGCGGCACTTCTGAAGTTGTTGAAAGGTGTGGAGGCCAAGTGTG										
Mus musculus	MEEBO	ILMN_216821	ILMN_216821	1810062O14RIK	scl53447.10_104	NM_178650.2			31560875	NM_178650.2	1810062O14Rik		ILMN_2675733	004850544	S	2018	CATCGGTGGGGGACTTTAAACCATGTTGGCCTCCCTAACCATGTTCCTGC										
Mus musculus	MEEBO	ILMN_221501	ILMN_221501	THSD2	scl38092.5_307	NM_028351.1			30794143	NM_028351.1	Thsd2		ILMN_2736451	003400487	S	2930	CTGGACATCTTTTCTTCACCAACTGTACTGCTCACATGGGCCACTTGGCT										
Mus musculus	RefSeq	ILMN_226172	ILMN_226172	BC024139	NM_198172.1	NM_198172.1		271278	37718996	NM_198172.1	BC024139	NP_937815.1	ILMN_2918509	004880541	S	2128	GATGGTTCGTGTTGGAGGTGGTTGGGCAGCTTTGGATGAATTTCTGGTCA	15	-	75947526-75947575	15qD3	Mus musculus cDNA sequence BC024139 (BC024139), mRNA.				6230424I18Rik; MGC37978	6230424I18Rik; MGC37978
Mus musculus	RefSeq	ILMN_216392	ILMN_216392	SLC25A27	NM_028711.3	NM_028711.3		74011	146141161	NM_028711.3	Slc25a27	NP_082987.1	ILMN_2670613	003840386	S	1445	CGTAGAGTGCACATATCGTAATCTACACAGAGGCAAATGAGAAGTCATGA				17qB3	Mus musculus solute carrier family 25, member 27 (Slc25a27), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		Ucp4; D530043E16Rik; 9430092A03Rik; 3632410G24Rik	Ucp4; D530043E16Rik; 9430092A03Rik; 3632410G24Rik
Mus musculus	MEEBO	ILMN_194262	ILMN_194262	UGT1A12	scl00394434.2_40				47059130	NM_201644	Ugt1a12		ILMN_2504842	006860414	S	12	GTGGGATCAACTGCCTCCAGAAGAAGTCACTTTCCAAGGAATTTGAAGCC										
Mus musculus	RefSeq	ILMN_199397	ILMN_199397	OLFR395	NM_147005.1	NM_147005.1		259007	22128932	NM_147005.1	Olfr395	NP_667216.1	ILMN_1230896	004570044	S	744	GACCTTGTTTTATGGGACAATTATTGGTCTCTACTTATGTCCATCAGGCA	11	-	73720199-73720248	11qB4	Mus musculus olfactory receptor 395 (Olfr395), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-360H16.3; MOR135-10	RP23-360H16.3; MOR135-10
Mus musculus	Riken	ILMN_204649	ILMN_204649	5830469K17RIK	ri|5830469K17|PX00103A04|AK030956|2590					AK030956	5830469K17Rik		ILMN_2566600	001660608	S	2051	TGTGGAAAACCCAGAGGCAAAGAGAAAGGGGTGGGCAAGGGAGAGCCCTG										
Mus musculus	RefSeq	ILMN_212823	ILMN_212823	ASTE1	NM_025651.2	NM_025651.2		66595	31560234	NM_025651.2	Aste1	NP_079927.2	ILMN_2630756	006270377	S	2073	CCTGGGAACCACTGCAGATGCCAAGCACTGGTATGACAGAAGCAACCGGT	9	+	105263306-105263355	9qF1	Mus musculus asteroid homolog 1 (Drosophila) (Aste1), mRNA.				AV006403; 1100001A21Rik; MGC107393	AV006403; 1100001A21Rik; MGC107393
Mus musculus	MEEBO	ILMN_212776	ILMN_212776	SOX6	scl020679.1_35	NM_011445.1			6755609	NM_011445.1	Sox6		ILMN_2702322	001300717	S	1180	CCCAAGGCTAAAGGGCATAAGTGACCGTTTTGGCAGGAATTTGGACCCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual [goid 35051] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]; Any mechanism, at the level of transcription or post-transcription, causing long-term gene inactivation [goid 16458] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	MEEBO	ILMN_212776	ILMN_212776	SOX6	scl020679.1_35	NM_011445.1			6755609	NM_011445.1	Sox6		ILMN_1254646	004730494	S	1179	ACCCAAGGCTAAAGGGCATAAGTGACCGTTTTGGCAGGAATTTGGACCCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual [goid 35051] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IGI]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]; Any mechanism, at the level of transcription or post-transcription, causing long-term gene inactivation [goid 16458] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_193012	ILMN_193012	V1RC24	NM_134179.1	NM_134179.1		171197	21717686	NM_134179.1	V1rc24	NP_598940.1	ILMN_2815258	004860152	S	746	CCACCTCAGTCCTGTTGTGGATGTATGACCCAGTCATCCTGACTGTTCAG	6	-	57875990-57876039	6qB3	Mus musculus vomeronasal 1 receptor, C24 (V1rc24), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_193012	ILMN_193012	V1RC24	NM_134179.1	NM_134179.1		171197	21717686	NM_134179.1	V1rc24	NP_598940.1	ILMN_1222175	002490181	S	123	CTCATGTCAATTATCCTTCGTTCACATAATGATGTTACTCACTGCAGGAG	6	-	57876613-57876662	6qB3	Mus musculus vomeronasal 1 receptor, C24 (V1rc24), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_217495	ILMN_217495	MED24	NM_011869.2	NM_011869.2		23989	119220578	NM_011869.2	Med24	NP_035999.2	ILMN_2818189	000610040	S	3232	GTCCTTTGAACCAGCACCCAAAGACTCTGAGCAGTCCCTATGGTCACCCC	11	-	98566033-98566082	11qD	Mus musculus mediator complex subunit 24 (Med24), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IMP]		Thrap4; D11Ertd307e; Gse2; AU040102; R75526; AW547152; DRIP100; Trap100; Pparb2; Pparbp2; 911GSE; KIAA0130	Thrap4; D11Ertd307e; Gse2; AU040102; R75526; AW547152; DRIP100; Trap100; Pparb2; Pparbp2; 911GSE; KIAA0130
Mus musculus	RefSeq	ILMN_186502	ILMN_186502	USP12	NM_011669.3	NM_011669.3		22217	118130069	NM_011669.3	Usp12	NP_035799.1	ILMN_2436866	006510279	S	4217	GCTATATAAATACAAAATAATATCTATTAAAGTTGGCTTATTTGTGCTTG	5	-	147546395-147546444	5qG3	Mus musculus ubiquitin specific peptidase 12 (Usp12), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Ubh1	Ubh1
Mus musculus	RefSeq	ILMN_186502	ILMN_186502	USP12	NM_011669.3	NM_011669.3		22217	118130069	NM_011669.3	Usp12	NP_035799.1	ILMN_1236369	005420465	S	3198	CTGCAGCCTTGGGTTCAGAGACAAGGCATACAGTGCGGCTGGGTCCTCCA	5	-	147547414-147547463	5qG3	Mus musculus ubiquitin specific peptidase 12 (Usp12), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	Ubh1	Ubh1
Mus musculus	MEEBO	ILMN_224114	ILMN_224114	FOLR2	scl30960.6.1_9				6679824	NM_008035	Folr2		ILMN_2775030	004560398	S	869	CCGCTGCATCCAGATGTGGTTTGACTCAACCCAGGGCAATCCGAATGAGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]	The targeting of proteins to a membrane that occurs after their translation. Some secretory proteins exhibit posttranslational transport into the endoplasmic reticulum (ER) lumen: they are synthesized in their entirety on free cytosolic ribosomes and then released into the cytosol, where they are bound by chaperones which keep them in an unfolded state, and subsequently are translocated across the ER membrane [goid 6620] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence TAS]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [evidence TAS]		
Mus musculus	RefSeq	ILMN_187062	ILMN_261608	VMN2R89	NM_009486.2	NM_009486.2		22301	142376151	NM_009486.2	Vmn2r89	NP_033512.1	ILMN_2440838	005420687	S	2454	CATTTTGACCTGTGGTTATGTGTTTAAGCCATGTGTTTAATTAATGATTA	14	+	52080706-52080755	14qC1	Mus musculus vomeronasal 2, receptor 89 (Vmn2r89), transcript variant 1, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	V2r11	V2r11
Mus musculus	MEEBO	ILMN_212690	ILMN_212690	BBX	scl0001794.1_14				44890654	BC066821	Bbx		ILMN_2629228	001300598	S	2156	CACAAAATTGTCAGCAAATATAAGCACAAAAAGGAGAAGCCTAATGTTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220400	ILMN_220400	SLC22A1	NM_009202.4	NM_009202.4		20517	145966835	NM_009202.4	Slc22a1	NP_033228.2	ILMN_1247071	006100112	S	1915	GAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACCAGGTTCCAAATG				17qA1	Mus musculus solute carrier family 22 (organic cation transporter), member 1 (Slc22a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [evidence IDA]	Oct1; Lx1; MGC14019; Orct; Orct1	Oct1; Lx1; MGC14019; Orct; Orct1
Mus musculus	RefSeq	ILMN_220400	ILMN_220400	SLC22A1	NM_009202.4	NM_009202.4		20517	145966835	NM_009202.4	Slc22a1	NP_033228.2	ILMN_1248318	004250100	S	1615	CTTCACCCCCTTCATGGTGTTCAGGCTGATGGAAGTTTGGCAAGCCCTGC				17qA1	Mus musculus solute carrier family 22 (organic cation transporter), member 1 (Slc22a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [evidence IDA]	Oct1; Lx1; MGC14019; Orct; Orct1	Oct1; Lx1; MGC14019; Orct; Orct1
Mus musculus	RefSeq	ILMN_209652	ILMN_209652	LGMN	NM_011175.2	NM_011175.2		19141	118130389	NM_011175.2	Lgmn	NP_035305.1	ILMN_2597868	001690719	S	1221	CAGCACATGACTGCTACCAGGAGGCTGTAACCCACTTCCGCACACACTGC	12	-	103633874-103633923	12qE	Mus musculus legumain (Lgmn), mRNA.	A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]	Prsc1; AEP; AI746452; AU022324	Prsc1; AEP; AI746452; AU022324
Mus musculus	RefSeq	ILMN_200918	ILMN_200918	LOC381901	XM_355919.1	XM_355919.1			38087026	XM_355919.1	LOC381901		ILMN_1249869	001400600	S	1207	TGGGATGTGGGGATGCAGGCACAAAGCAAACCAAGCTGCCTTCCTGGAGG										
Mus musculus	RefSeq	ILMN_209303	ILMN_209303	BMPR1B	NM_007560.3	NM_007560.3		12167	41053831	NM_007560.3	Bmpr1b	NP_031586.1	ILMN_1228799	000940497	S	1838	CCCAGGACATTAAACTCTGACGTCAGATACTTGTGGACAGAGCAAGAATT	3	-	141503548-141503578:141503579-141503597	3qH1	Mus musculus bone morphogenetic protein receptor, type 1B (Bmpr1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Increase in size of the cumulus surrounding the oocyte including change in morphology due to proliferation and dispersion of cumulus cells [goid 1550] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The type of sexual cycle seen in female mammals, with physiologic changes in the endometrium that recur at regular intervals during the reproductive years [goid 42698] [evidence IMP]; The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 6703] [evidence NAS]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12151307] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence TAS]; Combining with transforming growth factor beta to initiate a change in cell activity; upon ligand binding, catalyzes the phosphorylation of a type I TGF-beta receptor [goid 5025] [evidence IMP]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]	Acvrlk6; AI385617; CFK-43a; Alk6; AV355320; ALK-6; BMPR-IB	Acvrlk6; AI385617; CFK-43a; Alk6; AV355320; ALK-6; BMPR-IB
Mus musculus	RefSeq	ILMN_209303	ILMN_209303	BMPR1B	NM_007560.3	NM_007560.3		12167	41053831	NM_007560.3	Bmpr1b	NP_031586.1	ILMN_1219486	006220470	S	1858	CGTCAGATACTTGTGGACAGAGCAAGAATTTCACAGAAGCATCGTTAGCC	3	-	141503528-141503577	3qH1	Mus musculus bone morphogenetic protein receptor, type 1B (Bmpr1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Increase in size of the cumulus surrounding the oocyte including change in morphology due to proliferation and dispersion of cumulus cells [goid 1550] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The type of sexual cycle seen in female mammals, with physiologic changes in the endometrium that recur at regular intervals during the reproductive years [goid 42698] [evidence IMP]; The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 6703] [evidence NAS]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12151307] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence TAS]; Combining with transforming growth factor beta to initiate a change in cell activity; upon ligand binding, catalyzes the phosphorylation of a type I TGF-beta receptor [goid 5025] [evidence IMP]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]	Acvrlk6; AI385617; CFK-43a; Alk6; AV355320; ALK-6; BMPR-IB	Acvrlk6; AI385617; CFK-43a; Alk6; AV355320; ALK-6; BMPR-IB
Mus musculus	RefSeq	ILMN_209303	ILMN_209303	BMPR1B	NM_007560.3	NM_007560.3		12167	41053831	NM_007560.3	Bmpr1b	NP_031586.1	ILMN_1216262	002680097	S	4997	GGTGGTTACACCATCTCAGAAACTCCCAGTCCCATAAAGAGTGGAAAGGA	3	-	141500389-141500438	3qH1	Mus musculus bone morphogenetic protein receptor, type 1B (Bmpr1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Increase in size of the cumulus surrounding the oocyte including change in morphology due to proliferation and dispersion of cumulus cells [goid 1550] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The type of sexual cycle seen in female mammals, with physiologic changes in the endometrium that recur at regular intervals during the reproductive years [goid 42698] [evidence IMP]; The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 6703] [evidence NAS]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12151307] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence TAS]; Combining with transforming growth factor beta to initiate a change in cell activity; upon ligand binding, catalyzes the phosphorylation of a type I TGF-beta receptor [goid 5025] [evidence IMP]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]	Acvrlk6; AI385617; CFK-43a; Alk6; AV355320; ALK-6; BMPR-IB	Acvrlk6; AI385617; CFK-43a; Alk6; AV355320; ALK-6; BMPR-IB
Mus musculus	RefSeq	ILMN_209303	ILMN_209303	BMPR1B	NM_007560.3	NM_007560.3		12167	41053831	NM_007560.3	Bmpr1b	NP_031586.1	ILMN_2812900	002360598	S	5163	TTTCAAAACAAGACTCATTTGTGTTCTATCGGGGAACCAGTGCCTTATGG	3	-	141500223-141500272	3qH1	Mus musculus bone morphogenetic protein receptor, type 1B (Bmpr1b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Increase in size of the cumulus surrounding the oocyte including change in morphology due to proliferation and dispersion of cumulus cells [goid 1550] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The type of sexual cycle seen in female mammals, with physiologic changes in the endometrium that recur at regular intervals during the reproductive years [goid 42698] [evidence IMP]; The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 6703] [evidence NAS]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IMP]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12151307] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence TAS]; Combining with transforming growth factor beta to initiate a change in cell activity; upon ligand binding, catalyzes the phosphorylation of a type I TGF-beta receptor [goid 5025] [evidence IMP]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + receptor-protein serine/threonine = ADP + receptor-protein serine/threonine phosphate [goid 4675] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4702] [evidence IEA]	Acvrlk6; AI385617; CFK-43a; Alk6; AV355320; ALK-6; BMPR-IB	Acvrlk6; AI385617; CFK-43a; Alk6; AV355320; ALK-6; BMPR-IB
Mus musculus	MEEBO	ILMN_190518	ILMN_190518	1700001O11RIK	scl078318.1_57						1700001O11Rik		ILMN_2470851	004040379	S	11	GCCCCTTCCTCAGTGGCAAGCCCTCTCTCTCAGACAGCCAATCATCAGTC										
Mus musculus	RefSeq	ILMN_219881	ILMN_219881	H19	NR_001592.1	NR_001592.1		14955	41462403	NR_001592.1	H19		ILMN_2906728	001440543	S	2304	ACCCCCTTTTGAATTTGCACTAAGTCGATTGCACTGGTTTGGAGTCCCGG	7	-	149761698-149761747	7qF5	Mus musculus H19 fetal liver mRNA (H19), non-coding RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Several ribosomes bound to one mRNA [goid 5844] [evidence ISA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]		AI747191	AI747191
Mus musculus	RefSeq	ILMN_219881	ILMN_219881	H19	NR_001592.1	NR_001592.1		14955	41462403	NR_001592.1	H19		ILMN_1256343	003290056	S	2558	CCTCCTCACCAGGGCCTCACCAGAGGTCCTGGGTCCATCAATAAATACAG	7	-	149761444-149761493	7qF5	Mus musculus H19 fetal liver mRNA (H19), non-coding RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; Several ribosomes bound to one mRNA [goid 5844] [evidence ISA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]		AI747191	AI747191
Mus musculus	RefSeq	ILMN_201385	ILMN_258681	LOC635340	XM_001005599.1	XM_001005599.1		635340	94421388	XM_001005599.1	LOC635340	XP_001005599.1	ILMN_1252393	002230437	S	346	GGCGTGACAAAAGGCAAAGAGTACAAAGGGAAAGGCTACCATCACCGAAC					PREDICTED: Mus musculus similar to 60S ribosomal protein L3 (L4) (LOC635340), mRNA.					
Mus musculus	RefSeq	ILMN_213003	ILMN_317237	WDR90	XM_001479840.1	XM_001479840.1		106618	149268685	XM_001479840.1	Wdr90	XP_001479890.1	ILMN_2632519	001340471	S	5705	CCGATCCCTGAGCTATTGCTAGGAACATAGGCAGAAAAGCCAGACTGTGG	17	-	25981973-25982012:25982013-25982022	17qA3.3	PREDICTED: Mus musculus WD repeat domain 90, transcript variant 1 (Wdr90), mRNA.					
Mus musculus	Riken	ILMN_206792	ILMN_206792	MIL1-PENDING	ri|E330039O16|PX00319A03|AK087910|2435					AK087910	Mil1-pending		ILMN_1225838	003130438	S	2363	GGAAGGAGAGAACCAATCCCCTTACCTTGTTCTCTGACAGCTACACACCC										
Mus musculus	RefSeq	ILMN_223734	ILMN_223734	OCLN	NM_008756.2	NM_008756.2		18260	31982140	NM_008756.2	Ocln	NP_032782.1	ILMN_1226104	002680020	S	2880	GCTGTGCTAGCAGGTGATTGCCCAGTCCTTGGGCAGTGAACAAAACTCTG	13	-	101267584-101267633	13qD1	Mus musculus occludin (Ocln), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Ocl	Ocl
Mus musculus	RefSeq	ILMN_215589	ILMN_215589	IRF3	NM_016849.3	NM_016849.3		54131	56699428	NM_016849.3	Irf3	NP_058545.1	ILMN_2664319	004280193	S	1497	CAGGCCACTGGAAATATCTGAGCCCCACTCAGCTGCTACCAATAAAGCAG	7	+	52257696-52257716:52257717-52257745	7qB4	Mus musculus interferon regulatory factor 3 (Irf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IGI]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	C920001K05Rik; MGC91046; IRF-3	C920001K05Rik; MGC91046; IRF-3
Mus musculus	RefSeq	ILMN_215589	ILMN_215589	IRF3	NM_016849.3	NM_016849.3		54131	56699428	NM_016849.3	Irf3	NP_058545.1	ILMN_1224505	004250291	S	955	GGCAGCCAGTCACCCTGCCCGATCCTGAGGGGTTTCTGACGGACAAGCTT	7	+	52256129-52256178	7qB4	Mus musculus interferon regulatory factor 3 (Irf3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IGI]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	C920001K05Rik; MGC91046; IRF-3	C920001K05Rik; MGC91046; IRF-3
Mus musculus	RefSeq	ILMN_245043	ILMN_245043	DPPA5	NM_025274.1	NM_025274.1		434423	13384609	NM_025274.1	Dppa5	NP_079550.2	ILMN_3090545	007150711	A	308	GATGCTTCAGTCCATGGCTGAGAGGTACCACCTGCGCCAGCAAAAAGGAG	9	-	78152974-78152978:78153405-78153449	9qE1	Mus musculus developmental pluripotency associated 5 (Dppa5), mRNA.				ecat2; AA536857; Esg1	ecat2; AA536857; Esg1
Mus musculus	RefSeq	ILMN_245043	ILMN_245043	DPPA5	NM_025274.1	NM_025274.1		434423	13384609	NM_025274.1	Dppa5	NP_079550.2	ILMN_3018711	001980070	I	45	TTCCTTGGCAGGATGATGGTGACCCTCGTGACCCGTAAAGATATCCCCCC	9	-	78153744-78153783:78153784-78153793	9qE1	Mus musculus developmental pluripotency associated 5 (Dppa5), mRNA.				ecat2; AA536857; Esg1	ecat2; AA536857; Esg1
Mus musculus	RefSeq	ILMN_221672	ILMN_221672	SOX8	NM_011447.1	NM_011447.1		20681	33563275	NM_011447.1	Sox8	NP_035577.1	ILMN_2784686	002450279	S	2783	TCTTCAGCTTATCTCCTTCCGGGGGCCGAGGTGGGAACCACAGCAAACTC	17	-	25293659-25293708	17qA3.3	Mus musculus SRY-box containing gene 8 (Sox8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IGI]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_235007	ILMN_235007	OLFR902	NM_146802.1	NM_146802.1		258798	22129252	NM_146802.1	Olfr902	NP_667013.1	ILMN_2992434	006110270	S	760	AGAGCATTTGTGTATTTCAAACCCTCCTCACCTGGGTCTATGGAATGGGC	9	+	38257218-38257267	9qA5.1	Mus musculus olfactory receptor 902 (Olfr902), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR169-1	MOR169-1
Mus musculus	RefSeq	ILMN_218833	ILMN_218833	PPIC	NM_008908.3	NM_008908.3		19038	145966878	NM_008908.3	Ppic	NP_032934.1	ILMN_2700797	000110706	S	677	TCCCTGATTGGTGACAGAAATGGCGGAAGACAGGAAACACACTGGCTGGC				18qD1	Mus musculus peptidylprolyl isomerase C (Ppic), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	CyP-20c	CyP-20c
Mus musculus	RefSeq	ILMN_187018	ILMN_187018	USP43	NM_173754.4	NM_173754.4		216835	123314451	NM_173754.4	Usp43	NP_776115.2	ILMN_1251191	005390092	S	4361	GTCACAGCTTGTTGCTATCTATCAGAATGCAGTTGCCTGTGTTGTTTCTG	11	-	67668076-67668125	11qB3	Mus musculus ubiquitin specific peptidase 43 (Usp43), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	RP23-464J2.1; B930051C24; C630032K07Rik; 9130017K11Rik	RP23-464J2.1; B930051C24; C630032K07Rik; 9130017K11Rik
Mus musculus	RefSeq	ILMN_195483	ILMN_240693	5830433I10RIK	XM_974092.2	XM_974092.2		76030	149268481	XM_974092.2	5830433I10Rik	XP_979186.2	ILMN_2515975	002350072	S	1055	CAAAATTCTTTCTGATTTCATTACCTGGCCTGCAAATAAAAGATTCTTTA	17	-	15840979-15841028	17qA2	PREDICTED: Mus musculus RIKEN cDNA 5830433I10 gene (5830433I10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199231	ILMN_199231	LOC217236	XM_137876.2	XM_137876.2			38092052	XM_137876.2	LOC217236		ILMN_1259034	000270075	S	7569	AAATGTGTTGGCAGACTCGATGCGGACTCTCAGGAGCGGAAAAGTCGGTG										
Mus musculus	RefSeq	ILMN_196492	ILMN_196492	2310036I02RIK	XM_128950.4	XM_128950.4			38084344	XM_128950.4	2310036I02Rik		ILMN_2524489	007560026	S	969	GGCCACAGCTGGAGAAGCCAATGTCCCCTTTATCACTGTGAGCGGATCTG										
Mus musculus	MEEBO	ILMN_213697	ILMN_213697	OGDH	scl018293.8_37	NM_010956.1			33563269	NM_010956.1	Ogdh		ILMN_2691697	003890215	S	580	CCTCTCGGAATTAGTTGTGTAAATTTTGATGATGCTCCGGTAACTGTTTC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]; Catalysis of the reaction: 2-oxoglutarate + CoA + NAD+ = succinyl-CoA + CO2 + NADH [goid 34602] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2-oxoglutarate + lipoamide = S-succinyldihydrolipoamide + CO2 [goid 4591] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216594	ILMN_216594	ADCY10	NM_173029.2	NM_173029.2		271639	141801853	NM_173029.2	Adcy10	NP_766617.1	ILMN_2672960	001510632	S	4893	CTCAGCCTCCGAGTTAACAGGAGATCAATGGCTTCAGACAGTCTTGAGTC	1	+	167505745-167505794	1qH2.3	Mus musculus adenylate cyclase 10 (Adcy10), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS];  [goid 16849] [evidence IEA]	sAC; Adcy10; 4931412F17; 4930431D04Rik	sAC; Adcy10; 4931412F17; 4930431D04Rik
Mus musculus	MEEBO	ILMN_217930	ILMN_217930	HAND1	scl40193.3.1_118	NM_008213.1			6680164	NM_008213.1	Hand1		ILMN_2689456	002120719	S	1308	CGAAGACACACCCTTCCAACCCATCTGGGTGGAACTCAACCCCAAAAGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [evidence IMP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IGI]		
Mus musculus	RefSeq	ILMN_212915	ILMN_212915	CHD1L	NM_026539.1	NM_026539.1		68058	13386043	NM_026539.1	Chd1l	NP_080815.1	ILMN_2986172	000780725	S	2910	ATACAGGAACACACAATGTATATGGGGAAGCCCTTTGGCTTCAGATTGCC	3	-	97646182-97646231	3qF2.2	Mus musculus chromodomain helicase DNA binding protein 1-like (Chd1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Snf2p; 4432404A22Rik	Snf2p; 4432404A22Rik
Mus musculus	RefSeq	ILMN_209618	ILMN_209618	LRRIQ3	NM_028938.2	NM_028938.2		74435	110347522	NM_028938.2	Lrriq3	NP_083214.2	ILMN_2597539	004730736	S	2206	CTCTCCACAAGACAGATCTAGGGATAGCTAGGTTCAGGATCAGAGAGAAG	3	+	154856798-154856847	3qH4	Mus musculus leucine-rich repeats and IQ motif containing 3 (Lrriq3), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4933403H06Rik; BB020367; 4930438B07Rik; MGC132959; 4930511J15Rik	4933403H06Rik; BB020367; 4930438B07Rik; MGC132959; 4930511J15Rik
Mus musculus	MEEBO	ILMN_218910	ILMN_218910	RACGAP1	scl0002506.1_35				34328478	NM_012025	Racgap1		ILMN_2774786	005420133	S	154	CTCTGTATACCAGGACCCAAACCCAAGAGATCTGCTTGCTTTTGCACCTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [pmid 10493933] [evidence IEP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218066	ILMN_239971	OLFR630	NM_147098.1	NM_147098.1		259102	22128644	NM_147098.1	Olfr630	NP_667309.1	ILMN_2691125	004670441	S	1009	CAGATCCGTGAAGGAATCCTCCATTTGCTTTGTTCTCCAAAAATCAGTTC	7	-	110903150-110903199	7qE3	Mus musculus olfactory receptor 630 (Olfr630), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR17-1	MOR17-1
Mus musculus	RefSeq	ILMN_239971	ILMN_239971	OLFR630	NM_147098.1	NM_147098.1		259102	22128644	NM_147098.1	Olfr630	NP_667309.1	ILMN_2875550	003190537	S	1202	GAAGGAACATGCTCTGTTCATGTTTGTCTGTGTTTGGAAAGCCTGTCTCC	7	-	110902957-110903006	7qE3	Mus musculus olfactory receptor 630 (Olfr630), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR17-1	MOR17-1
Mus musculus	MEEBO	ILMN_217115	ILMN_217115	5830411J07RIK	scl19163.1.1_140	NM_029082.1			13386367	NM_029082.1	5830411J07Rik		ILMN_2679267	006580477	S	1546	CACAAGTGCACAGCAGGGTTTCTGTTGGATCTTTTGAACCTGTAAGCTCC										
Mus musculus	RefSeq	ILMN_209808	ILMN_209808	TLE1	NM_011599.3	NM_011599.3		21885	141803329	NM_011599.3	Tle1	NP_035729.2	ILMN_2599402	007040204	S	2901	TTCTGCATGTGAACAAGCCTGACAAGTACCAGCTGCACCTCCACGAGAGC	4	-	71781203-71781252	4qC3	Mus musculus transducin-like enhancer of split 1, homolog of Drosophila E(spl) (Tle1), mRNA. XM_984202 XM_984240 XM_984277 XM_984316 XM_984359 XM_984397 XM_984426 XM_984456 XM_984492 XM_984530	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	C230057C06Rik; Grg1	C230057C06Rik; Grg1
Mus musculus	RefSeq	ILMN_209808	ILMN_209808	TLE1	NM_011599.3	NM_011599.3		21885	141803329	NM_011599.3	Tle1	NP_035729.2	ILMN_2765425	003140138	S	4211	CCTAGTATCCTACTGACAAACCAAACCATTATTGTAGGAAGGCCCAGTCT	4	-	71778222-71778271	4qC3	Mus musculus transducin-like enhancer of split 1, homolog of Drosophila E(spl) (Tle1), mRNA. XM_984202 XM_984240 XM_984277 XM_984316 XM_984359 XM_984397 XM_984426 XM_984456 XM_984492 XM_984530	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	C230057C06Rik; Grg1	C230057C06Rik; Grg1
Mus musculus	RefSeq	ILMN_209808	ILMN_209808	TLE1	NM_011599.3	NM_011599.3		21885	141803329	NM_011599.3	Tle1	NP_035729.2	ILMN_1230788	000610341	S	3116	GTCACTGGCTCAGGGGACAAAAAGGCTACCGTTTATGAGGTCATCTACTG	4	-	71779317-71779317:71779318-71779366	4qC3	Mus musculus transducin-like enhancer of split 1, homolog of Drosophila E(spl) (Tle1), mRNA. XM_984202 XM_984240 XM_984277 XM_984316 XM_984359 XM_984397 XM_984426 XM_984456 XM_984492 XM_984530	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	C230057C06Rik; Grg1	C230057C06Rik; Grg1
Mus musculus	RefSeq	ILMN_220704	ILMN_220704	MCOLN1	NM_053177.1	NM_053177.1		94178	16716462	NM_053177.1	Mcoln1	NP_444407.1	ILMN_2823195	003450553	S	1474	TCACTCATCAACGGAGACGACATGTTTGTGACGTTCGCGGCCATGCAGGC	8	+	3512686-3512735	8qA1.1	Mus musculus mucolipin 1 (Mcoln1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence ISA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISA]	TRPML1; MGC7172; mucolipidin; 2210015I05Rik	TRPML1; MGC7172; mucolipidin; 2210015I05Rik
Mus musculus	RefSeq	ILMN_219810	ILMN_219810	SULT1C1	NM_018751.2	NM_018751.2		20888	40254553	NM_018751.2	Sult1c1	NP_061221.2	ILMN_2713826	001240307	S	1196	TTTTTGGTTACACTATGTGAATATTATTGATACCTACCACACAATCATGT	17	-	54101207-54101256	17qC	Mus musculus sulfotransferase family, cytosolic, 1C, member 1 (Sult1c1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione [goid 6790] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IDA]	Stp2; mOLFST; (PST)G; Sult1a2; P-SULT	Stp2; mOLFST; (PST)G; Sult1a2; P-SULT
Mus musculus	RefSeq	ILMN_249636	ILMN_249636	LEO1	NM_001039522.1	NM_001039522.1		235497	87299618	NM_001039522.1	Leo1	NP_001034611.1	ILMN_2903351	006060368	S	1841	AAGGGGGCATCCGCGAGGAACGAGCCAGAATCTACTCCTCGGACAGTGAT	9	+	75306054-75306068:75308813-75308847	9qD	Mus musculus Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (Leo1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MGC102277; Gm185; MGC100232	MGC102277; Gm185; MGC100232
Mus musculus	RefSeq	ILMN_187562	ILMN_187562	TRP53RK	NM_023815.4	NM_023815.4		76367	118130623	NM_023815.4	Trp53rk	NP_076304.2	ILMN_1240891	000150458	S	1360	GAGGCTACATTAGTGCCTGGTGTACATGTCCTGCCATTTGCCAGAGCAGC	2	+	166621939-166621988	2qH3	Mus musculus transformation related protein 53 regulating kinase (Trp53rk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]	mNori-2p; Trp53tk; 2810408M09Rik; MGC2882; 5630401H01Rik; PRPK; Nori-2; 4933401B08Rik	mNori-2p; Trp53tk; 2810408M09Rik; MGC2882; 5630401H01Rik; PRPK; Nori-2; 4933401B08Rik
Mus musculus	RefSeq	ILMN_200788	ILMN_200788	LOC385348	XM_358202.1	XM_358202.1			38086153	XM_358202.1	LOC385348		ILMN_2540008	002850008	S	191	GGGAGGAACTGGAGCAATTGAAGCTGACTTTCAAGGATAGAGATATGTAC										
Mus musculus	RefSeq	ILMN_212847	ILMN_212847	CHEK1	NM_007691.2	NM_007691.2		12649	31542384	NM_007691.2	Chek1	NP_031717.2	ILMN_3009652	001170154	S	3024	GCATATTTGGATTGTTGCCACCTTTTGTCCATGTAATTGATACTGGTGTG	9	-	36458445-36458494	9qA4	Mus musculus checkpoint kinase 1 homolog (S. pombe) (Chek1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence IMP]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IDA]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]	rad27; Chk1; C85740	rad27; Chk1; C85740
Mus musculus	MEEBO	ILMN_184656	ILMN_184656	5530401J07RIK	scl48414.1_3						5530401J07Rik		ILMN_2420434	001190026	S	20	AGGGTCTGGAAGGCTGGGGACCTTGAGCTTTTAGCAAGTGTTCAGCCACA										
Mus musculus	RefSeq	ILMN_215917	ILMN_215917	IMMT	NM_029673.2	NM_029673.2		76614	70608130	NM_029673.2	Immt	NP_083949.2	ILMN_3162174	000780189	S	2475	GCAGGGTTTGCAACAAGGGTCCCAGAATTGTCCAGAAGTGAGCAGGTTCC	6	+	71824985-71825034	6qC1	Mus musculus inner membrane protein, mitochondrial (Immt), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700082C19Rik; D830041H16Rik; HMP; P87/89; P89; P87	1700082C19Rik; D830041H16Rik; HMP; P87/89; P89; P87
Mus musculus	RefSeq	ILMN_223619	ILMN_223619	DLG3	NM_016747.2	NM_016747.2		53310	118131177	NM_016747.2	Dlg3	NP_058027.1	ILMN_2993836	002570131	S	4639	ACAGGTATCCTACCAGCATAATGAGGCTAACTGTGACTCGTGGGGCCCAG	X	+	98013428-98013477	XqC3	Mus musculus discs, large homolog 3 (Drosophila) (Dlg3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	SAP102; mKIAA1232; Dlgh3	SAP102; mKIAA1232; Dlgh3
Mus musculus	RefSeq	ILMN_200130	ILMN_200130	LOC385785	XM_358945.1	XM_358945.1			38080563	XM_358945.1	LOC385785		ILMN_2537695	006960348	S	47	CCTATGTTAAAGGAGATGAACAGTTATCTTGCGCGCACTGGACTCGACCA										
Mus musculus	RefSeq	ILMN_221340	ILMN_221340	RCOR2	NM_054048.3	NM_054048.3		104383	154147710	NM_054048.3	Rcor2	NP_473389.1	ILMN_1214713	000160470	S	1814	CTTTCCTTCTTTTTAGCAATAAGTCAGGTGCAGTGGAAGGGGATTGGGGT				19qA	Mus musculus REST corepressor 2 (Rcor2), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CoREST; AW122124; Rcor1; Rcor; 1A13	CoREST; AW122124; Rcor1; Rcor; 1A13
Mus musculus	MEEBO	ILMN_216464	ILMN_216464	6330577E15RIK	scl067788.3_30	NM_026377.1			33468988	NM_026377.1	6330577E15Rik		ILMN_2671366	007400017	S	751	GCAGGTTGAAGAGAAGGAAGACCTTCTTCGGAGGTTAAAGTTAGTCAAGA										
Mus musculus	RefSeq	ILMN_219357	ILMN_219357	RHBG	NM_021375.3	NM_021375.3		58176	142362534	NM_021375.3	Rhbg	NP_067350.2	ILMN_2707645	004860328	S	1595	GTCACCCAAGCCAGCTCCACTCTGGGTGGGAAGCTGGGTGATAAACAATG	3	-	88047063-88047112	3qF1	Mus musculus Rhesus blood group-associated B glycoprotein (Rhbg), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of ammonium into, out of, within or between cells. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals [goid 15696] [evidence IEA]			
Mus musculus	Riken	ILMN_206781	ILMN_206781	E030040J04RIK	ri|E030040J04|PX00206G02|AK087261|1608					AK087261	E030040J04Rik		ILMN_2582659	006900554	S	1029	CTCTTGCCCGGAAGCCATCTGGACTCCGACAGAGCAAGAGTAAACGAAGA										
Mus musculus	RefSeq	ILMN_219447	ILMN_219447	ZFAND2A	NM_133349.2	NM_133349.2		100494	42475963	NM_133349.2	Zfand2a	NP_579927.1	ILMN_1230489	001400170	S	2898	CATCAGGCCTCAGATTCTCTCCCTACTGCAAGGAAGCAAAATCACCAGGC	5	-	139947254-139947303	5qG2	Mus musculus zinc finger, AN1-type domain 2A (Zfand2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AA407930; AU016206; Airap	AA407930; AU016206; Airap
Mus musculus	MEEBO	ILMN_209956	ILMN_209956	1200009I06RIK	scl0002362.1_17	NM_028807.1			21312651	NM_028807.1	1200009I06Rik		ILMN_2740207	000670356	S	2359	CCTCGTTGGCCGAGGATCTGTCACCCTCTCCATGACTGACCCCAAGTTGG										
Mus musculus	RefSeq	ILMN_212535	ILMN_212535	ES22	NM_133660.2	NM_133660.2		13897	145301632	NM_133660.2	Es22	NP_598421.1	ILMN_2627528	004040259	S	1763	GGACTGAACTTCTGGCTAAGAAGCAACTGCCGACAGAACACACTGAGCTG				8qC5	Mus musculus esterase 22 (Es22), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IDA]	egasyn; Es-22; Eg	egasyn; Es-22; Eg
Mus musculus	RefSeq	ILMN_234379	ILMN_234379	D830046C22RIK	NM_177097.2	NM_177097.2		320197	31342800	NM_177097.2	D830046C22Rik	NP_796071.1	ILMN_2897137	004260228	S	2014	AGACAGGGTTGGCTTTTTGGGGGTGGGGGTGGTTGGTGGCCTGAAATGTG	5	+	139633352-139633401	5qG2	Mus musculus RIKEN cDNA D830046C22 gene (D830046C22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_184863	ILMN_184863	ZDHHC21	NM_026647.2	NM_026647.2		68268	31543990	NM_026647.2	Zdhhc21	NP_080923.2	ILMN_2780619	002650064	S	4529	ATGTGCAGAAGTGGTTCCATGAAGGACGGTGGCTCATTCCAGCTATTCTT	4	-	82448660-82448709	4qC3	Mus musculus zinc finger, DHHC domain containing 21 (Zdhhc21), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AL024349; D130004H04Rik; 9130404H11Rik	AL024349; D130004H04Rik; 9130404H11Rik
Mus musculus	RefSeq	ILMN_214513	ILMN_214513	GCNT1	NM_173442.2	NM_173442.2		14537	142381528	NM_173442.2	Gcnt1	NP_775618.1	ILMN_1256299	000290358	S	4396	TTCCCCTTCCCATGATTTTTGGTTGGTAGAGGCTACGTGGGGTAGATGGG	19	-	17400741-17400790	19qB	Mus musculus glucosaminyl (N-acetyl) transferase 1, core 2 (Gcnt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R = UDP + beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R [goid 3829] [evidence IEA]	C2 GlcNAcT; IGnT; B130048E03; 5630400D21Rik	C2 GlcNAcT; IGnT; B130048E03; 5630400D21Rik
Mus musculus	RefSeq	ILMN_214513	ILMN_214513	GCNT1	NM_173442.2	NM_173442.2		14537	142381528	NM_173442.2	Gcnt1	NP_775618.1	ILMN_2672297	003520220	S	3820	CTTCGCACCATTGCACTTGTTGAACCATGTCTGATGCTGTAGTGGCCCAG	19	-	17401317-17401366	19qB	Mus musculus glucosaminyl (N-acetyl) transferase 1, core 2 (Gcnt1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R = UDP + beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R [goid 3829] [evidence IEA]	C2 GlcNAcT; IGnT; B130048E03; 5630400D21Rik	C2 GlcNAcT; IGnT; B130048E03; 5630400D21Rik
Mus musculus	MEEBO	ILMN_212079	ILMN_212079	5830426I05RIK	scl076044.3_63				40254113	NM_133762	5830426I05Rik		ILMN_1232101	006550348	S	1210	ACGACACTGCGTCCATGGCAGGCTTACTAGAAATCATTGTGATCCTCTGG										
Mus musculus	MEEBO	ILMN_190207	ILMN_190207	9790357_3511_RC	9790357_3511_rc						9790357_3511_rc		ILMN_2468115	003420270	S	13	AATTACGGCTTTAGGATTTTGCTCCAATATCATCCATTCTTCATCTCCGT										
Mus musculus	Riken	ILMN_203299	ILMN_203299	CBFA2T1H	ri|C530004I09|PX00080D10|AK049615|1776					AK049615	Cbfa2t1h		ILMN_1233190	002120450	S	1650	CTGTAGTCCGTGGTGCAAGTTGTTCCTGGCTATCATTTTTCCTGGTGCAG										
Mus musculus	RefSeq	ILMN_216934	ILMN_216934	9030607L17RIK	NM_027829.3	NM_027829.3		71564	89886472	NM_027829.3	9030607L17Rik	NP_082105.3	ILMN_2677144	006350026	S	458	GTACGAGACCATCTCCTGCAGCAACTGCACGGACTCCCACGTCATTTGCT	10	+	80166608-80166657	10qC1	Mus musculus RIKEN cDNA 9030607L17 gene (9030607L17Rik), mRNA.				AI550407	AI550407
Mus musculus	RefSeq	ILMN_216190	ILMN_216190	N6AMT1	NM_026366.1	NM_026366.1		67768	39540505	NM_026366.1	N6amt1	NP_080642.1	ILMN_2845391	007380717	S	1423	CCACCAGAAAGGACACTGGTTAAAATCTCAGCCTAGGGCTGGAGAGATGG	16	+	87368526-87368575	16qC3.3	Mus musculus N-6 adenine-specific DNA methyltransferase 1 (putative) (N6amt1), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Pred28; Hemk2; MGC106447; 5830445C04Rik	Pred28; Hemk2; MGC106447; 5830445C04Rik
Mus musculus	RefSeq	ILMN_216190	ILMN_216190	N6AMT1	NM_026366.1	NM_026366.1		67768	39540505	NM_026366.1	N6amt1	NP_080642.1	ILMN_2668289	006110053	S	746	GCCGGCAGCTGAACAATCGCTCAGTAGGTTTCAGACTGATGCCATTGCCT	16	+	87367849-87367898	16qC3.3	Mus musculus N-6 adenine-specific DNA methyltransferase 1 (putative) (N6amt1), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Pred28; Hemk2; MGC106447; 5830445C04Rik	Pred28; Hemk2; MGC106447; 5830445C04Rik
Mus musculus	RefSeq	ILMN_216653	ILMN_216653	MAK16	NM_026453.3	NM_026453.3		67920	146134890	NM_026453.3	Mak16	NP_080729.1	ILMN_2701035	001400519	S	588	CCCCATCCATGCCTTCGACAAGGCCCTAGAGAAACAGGAAGCAGAAAGTG				8qA3	Mus musculus MAK16 homolog (S. cerevisiae) (Mak16), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AI314911; 2600016B03Rik	AI314911; 2600016B03Rik
Mus musculus	Riken	ILMN_206670	ILMN_206670	PELI2	ri|C230039J01|PX00174L03|AK082342|1329					AK082342	Peli2		ILMN_1253276	004150243	S	1032	CAAGGGAAACCTGAAAAGGAGCGCAGCAGTGTTGGCAGCAGGATGGGTGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_254727	ILMN_254727	ADARB1	NM_130895.2	NM_130895.2		110532	67625742	NM_130895.2	Adarb1	NP_570965.2	ILMN_3105343	001090112	A	6447	CTGCATGAGCTTCCTCACACCAAGCCCAGCCGGCACTGAGCATGAGATGC	10	-	76753531-76753580	10qC1	Mus musculus adenosine deaminase, RNA-specific, B1 (Adarb1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence ISS]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence ISS]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]	1700057H01Rik; D10Bwg0447e; AW558573; ADAR2; AW124433; BB220382; RED1	1700057H01Rik; D10Bwg0447e; AW558573; ADAR2; AW124433; BB220382; RED1
Mus musculus	RefSeq	ILMN_218133	ILMN_218133	SGSM1	NM_172718.2	NM_172718.2		52850	142352699	NM_172718.2	Sgsm1	NP_766306.1	ILMN_2692078	000270402	S	4754	TTTGCTGGTGCAGAGGTTGGTATTTTAGCACAGCCAGGTCCGGAGCTCCT	5	-	113672530-113672579	5qF	Mus musculus small G protein signaling modulator 1 (Sgsm1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AA408781; E130107M15; D5Bwg1524e; 2410098H20Rik	AA408781; E130107M15; D5Bwg1524e; 2410098H20Rik
Mus musculus	Riken	ILMN_205723	ILMN_205723	9630035A20RIK	ri|9630035A20|PX00116E14|AK036093|3355					AK036093	9630035A20Rik		ILMN_1243425	001450440	S	3103	ACAGCAAGGTCTGCCAGTAAGAGAGCTTGGGAGACAAACACCTTGCTTGC										
Mus musculus	MEEBO	ILMN_222386	ILMN_222386	4833414E09RIK	scl15977.1.2114_8	NM_027845.1			21313655	NM_027845.1	4833414E09Rik		ILMN_2748880	005420634	S	1089	CTCTGCACCCAGTCCTATAGTTCTCAGACGGAGCACTGCTGTATATATAA										
Mus musculus	MEEBO	ILMN_187110	ILMN_187110	RALGPS1	scl19429.19_321				31340803	NM_175211	Ralgps1		ILMN_1230211	000670474	S	20	TTTTCCCAGCAGACCCTGCATGCAGTTGTGTGAGGACTTTTCTCTAACAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]		
Mus musculus	RefSeq	ILMN_234571	ILMN_234571	EG433178	NM_001039218.2	NM_001039218.2		433178	113722128	NM_001039218.2	EG433178	NP_001034307.2	ILMN_2908807	001260435	S	384	CCTGGTAACAAAGACCTGTTGGAAGCTGGTGGCTGGATGGTCCTTCTGTG	18	+	44191680-44191729	18qB3	Mus musculus predicted gene, EG433178 (EG433178), mRNA.					
Mus musculus	RefSeq	ILMN_211050	ILMN_319410	LOC100043863	XM_001481112.1	XM_001481112.1		100043863	149255438	XM_001481112.1	LOC100043863	XP_001481162.1	ILMN_1234807	006580707	S	283	CAAATGGCATACACACGTATGGAATTCTCAAAAAAGATGAGACTCTCGCC	6	-	128626387-128626436	6qF3	PREDICTED: Mus musculus hypothetical protein LOC100043863 (LOC100043863), mRNA.					
Mus musculus	MEEBO	ILMN_194686	ILMN_194686	SCL0001163.1_8	scl0001163.1_8	AF439859.1			17017240	AF439859.1	scl0001163.1_8		ILMN_2508679	005490730	S	17	GCAAGCTCAAAGACAAAAGCCTCGGGATGACAAGCCTGCCTTCAGAAAGG										
Mus musculus	Riken	ILMN_205637	ILMN_205637	EPB4.1L3	ri|E130106G21|PX00091H03|AK053532|3935					AK053532	Epb4.1l3		ILMN_1254193	006180044	S	3859	GGTGAGAAACAGCTATACCATGCTTGCCAACAGGCAGTGGCTTGCTTGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_210730	ILMN_210730	9530028C05	scl29328.5_424				51711785	XM_489122	9530028C05		ILMN_2608587	006480427	S	2934	AGGTATCTTAGTAATTTTCTAACTTGTCTATTATAACTGCCATATTAAAT										
Mus musculus	RefSeq	ILMN_198581	ILMN_234655	GPR112	NM_001033327.2	NM_001033327.2		236798	139949095	NM_001033327.2	Gpr112	NP_001028499.2	ILMN_1233110	004480259	S	9157	TCCCATAAATGTCAGCAGAGATACCCACCTGACTCCCAGCTCTGGACTGG	X	+	54233378-54233427	XqA5	Mus musculus G protein-coupled receptor 112 (Gpr112), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gm367; PGR17	Gm367; PGR17
Mus musculus	RefSeq	ILMN_220832	ILMN_220832	ISL1	NM_021459.3	NM_021459.3		16392	142367700	NM_021459.3	Isl1	NP_067434.2	ILMN_2727472	001050358	S	2121	TTTGCCACAAGCGTCTCGGGATTGTGTTTGACTCCTGTCTGTCCAAGAAC	13	-	117088833-117088882	13qD2.3	Mus musculus ISL1 transcription factor, LIM/homeodomain (Isl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IGI]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IGI]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of visceral motor neurons. Visceral motor neurons innervate glandular targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21524] [evidence IGI]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a mesenchymal cell [goid 48762] [evidence IMP]; The process whereby neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21522] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196571	ILMN_196571	SHROOM2	NM_172441.2	NM_172441.2		110380	125347787	NM_172441.2	Shroom2	NP_766029.2	ILMN_2941062	005570037	S	5472	GGACAGATTGGGAAAAGACATTTTTAAATCATGTGTCTGACTTGTTGCTC	X	-	149046024-149046073	XqF3	Mus musculus shroom family member 2 (Shroom2), mRNA.	A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of actin depolymerization [goid 30835] [evidence IDA]; The maintenance of junctions between cells [goid 45217] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence ISS]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence ISS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence ISS]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IMP]; The aggregation of coloring matter in a particular location in a cell, occurring in response to some external stimulus [goid 43482] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the eye [goid 8057] [evidence ISS]; The directed movement of a melanosome to a specific location [goid 32401] [evidence ISS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	4832440C16; Apxl; C630003H05Rik	4832440C16; Apxl; C630003H05Rik
Mus musculus	RefSeq	ILMN_196571	ILMN_196571	SHROOM2	NM_172441.2	NM_172441.2		110380	125347787	NM_172441.2	Shroom2	NP_766029.2	ILMN_1248608	006980025	S	6870	GACCTTGCTTGTGGTCAGCTTTTGTGGCTTTACCCTGAACTCTGCCCTGG	X	-	149044626-149044675	XqF3	Mus musculus shroom family member 2 (Shroom2), mRNA.	A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of actin depolymerization [goid 30835] [evidence IDA]; The maintenance of junctions between cells [goid 45217] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence ISS]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence ISS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence ISS]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IMP]; The aggregation of coloring matter in a particular location in a cell, occurring in response to some external stimulus [goid 43482] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the eye [goid 8057] [evidence ISS]; The directed movement of a melanosome to a specific location [goid 32401] [evidence ISS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	4832440C16; Apxl; C630003H05Rik	4832440C16; Apxl; C630003H05Rik
Mus musculus	RefSeq	ILMN_219802	ILMN_196571	SHROOM2	NM_172441.2	NM_172441.2		110380	125347787	NM_172441.2	Shroom2	NP_766029.2	ILMN_1259603	005890612	S	7216	GCACAGTTTTTCCTTCTATATACGGGTGCCAAACACATCCTTAAAGGGGC	X	-	149044280-149044329	XqF3	Mus musculus shroom family member 2 (Shroom2), mRNA.	A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IDA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of actin depolymerization [goid 30835] [evidence IDA]; The maintenance of junctions between cells [goid 45217] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of the lens are generated and organized. Morphogenesis pertains to the creation of form. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2089] [evidence ISS]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence ISS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence ISS]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IMP]; The aggregation of coloring matter in a particular location in a cell, occurring in response to some external stimulus [goid 43482] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the eye [goid 8057] [evidence ISS]; The directed movement of a melanosome to a specific location [goid 32401] [evidence ISS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IDA]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]	4832440C16; Apxl; C630003H05Rik	4832440C16; Apxl; C630003H05Rik
Mus musculus	RefSeq	ILMN_188221	ILMN_188221	TNFRSF19	NM_013869.3	NM_013869.3		29820	31981427	NM_013869.3	Tnfrsf19	NP_038897.3	ILMN_2450817	003400215	S	9	GCAGCAACTGATCGGCGATCAGATTACAGGCACTCCATCTCCTAGTTCGC	14	-	60000521-60000570	14qD1	Mus musculus tumor necrosis factor receptor superfamily, member 19 (Tnfrsf19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Tnfrsf20; TAJ; TAJ-ALPHA; AL023044; AW123854; Troy; TRADE	Tnfrsf20; TAJ; TAJ-ALPHA; AL023044; AW123854; Troy; TRADE
Mus musculus	RefSeq	ILMN_188221	ILMN_188221	TNFRSF19	NM_013869.3	NM_013869.3		29820	31981427	NM_013869.3	Tnfrsf19	NP_038897.3	ILMN_2793522	002060546	S	3903	CCTTTCCTGTGGCAGAAGCCAGGACAAGATGGAGGAGACAAGGACTTTTG	14	-	59918244-59918293	14qD1	Mus musculus tumor necrosis factor receptor superfamily, member 19 (Tnfrsf19), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Tnfrsf20; TAJ; TAJ-ALPHA; AL023044; AW123854; Troy; TRADE	Tnfrsf20; TAJ; TAJ-ALPHA; AL023044; AW123854; Troy; TRADE
Mus musculus	RefSeq	ILMN_199446	ILMN_199446	LOC382564	XM_356573.1	XM_356573.1			38049309	XM_356573.1	LOC382564		ILMN_1237366	000630364	S	556	CAGGTGTGGGGGGTGAGGGTGGTTCTGTGCCAGCTTAGGCTTGTGTTTTC										
Mus musculus	MEEBO	ILMN_191557	ILMN_191557	SCL000388.1_140	scl000388.1_140	L35281.1			623164	L35281.1	scl000388.1_140		ILMN_1233215	003940673	S	13	GCCCCTTGCACAAGAAACCTGCAGAGGACTCTCATCGATGGGCATCAGAG										
Mus musculus	RefSeq	ILMN_217324	ILMN_217324	ATP2A2	NM_009722.2	NM_009722.2		11938	142386634	NM_009722.2	Atp2a2	NP_033852.1	ILMN_1239742	000770349	S	3877	GCGCATGTTTGACTGTAGTCTGTAAATAGAGGTCAGTTTCTGTGCTGGTA	5	-	122903580-122903629	5qF	Mus musculus ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 (Atp2a2), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence TAS]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction [goid 45822] [evidence IGI]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence TAS]; Any series of molecular signals that conveys information from the endoplasmic reticulum to the nucleus, usually resulting in a change in transcriptional regulation [goid 6984] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	mKIAA4195; 9530097L16Rik; SERCA2; KIAA4195; D5Wsu150e	mKIAA4195; 9530097L16Rik; SERCA2; KIAA4195; D5Wsu150e
Mus musculus	RefSeq	ILMN_217324	ILMN_217324	ATP2A2	NM_009722.2	NM_009722.2		11938	142386634	NM_009722.2	Atp2a2	NP_033852.1	ILMN_1245425	000940730	S	3700	GGCCTCCAGTCCTAACTTCAGTTGTTTAGGTGTGCAGCCAGCTGTTCCAC	5	-	122903757-122903806	5qF	Mus musculus ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 (Atp2a2), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence TAS]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction [goid 45822] [evidence IGI]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence TAS]; Any series of molecular signals that conveys information from the endoplasmic reticulum to the nucleus, usually resulting in a change in transcriptional regulation [goid 6984] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	mKIAA4195; 9530097L16Rik; SERCA2; KIAA4195; D5Wsu150e	mKIAA4195; 9530097L16Rik; SERCA2; KIAA4195; D5Wsu150e
Mus musculus	RefSeq	ILMN_212621	ILMN_212621	AFTPH	NM_181411.2	NM_181411.2		216549	31340973	NM_181411.2	Aftph	NP_852076.1	ILMN_2818717	001070564	S	3484	GTCACGCCATCGATGCTTGCTGGTTGTGGAGTGTGGATCACTGTCAGGAC	11	-	20585446-20585495	11qA3.1	Mus musculus aftiphilin (Aftph), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AU019184; AU018432; 9130023F12Rik; RP23-452C23.3	AU019184; AU018432; 9130023F12Rik; RP23-452C23.3
Mus musculus	RefSeq	ILMN_213806	ILMN_213806	CYP2C50	NM_134144.1	NM_134144.1		107141	19527381	NM_134144.1	Cyp2c50	NP_598905.1	ILMN_2640989	001570228	S	816	AGGCCAGGAAGACGGCAACTATCCATTGAAAAATAGGCTTGAACACCTGG	19	+	40166863-40166870:40171207-40171248	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 50 (Cyp2c50), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	AI266900	AI266900
Mus musculus	RefSeq	ILMN_213806	ILMN_213806	CYP2C50	NM_134144.1	NM_134144.1		107141	19527381	NM_134144.1	Cyp2c50	NP_598905.1	ILMN_2996640	000290437	S	1515	GATCACCCTGAGGCTTTAATTCACTGCTTTCCACACTGGACATACTGCTT	19	+	40188143-40188192	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 50 (Cyp2c50), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	AI266900	AI266900
Mus musculus	RefSeq	ILMN_213806	ILMN_213806	CYP2C50	NM_134144.1	NM_134144.1		107141	19527381	NM_134144.1	Cyp2c50	NP_598905.1	ILMN_1245217	000770390	S	818	GGCCAGGAAGACGGCAACTATCCATTGAAAAATAGGCTTGAACACCTGGC	19	+	40166865-40166870:40171207-40171250	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 50 (Cyp2c50), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	AI266900	AI266900
Mus musculus	RefSeq	ILMN_190888	ILMN_257213	SYS1	NM_025575.3	NM_025575.3		66460	145966733	NM_025575.3	Sys1	NP_079851.2	ILMN_2674425	003710767	S	1494	GGGAGGGTGTACTAAAGGTGCTGGAGGCTCACCCTGCTAAGCTTTCTTCC				2qH3	Mus musculus SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) (Sys1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		C87389; 2610042O14Rik; AI266964	C87389; 2610042O14Rik; AI266964
Mus musculus	Riken	ILMN_206421	ILMN_206421	C230043F19RIK	ri|C230043F19|PX00174L17|AK082380|2072					AK082380	C230043F19Rik		ILMN_1255607	001030180	S	1815	CAAGCCCTGTCAACCCTGTCACTGGAGGGCCGTATGTTTGCATCTGTGTG										
Mus musculus	RefSeq	ILMN_216448	ILMN_216448	ADM	NM_009627.1	NM_009627.1		11535	6752987	NM_009627.1	Adm	NP_033757.1	ILMN_1247207	004280603	S	966	CACGGGGCATAAGCCTCATTACTACTTGAACTTTCCAAAACCTAGCGAGG	7	+	117772918-117772967	7qF1	Mus musculus adrenomedullin (Adm), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	AM	AM
Mus musculus	RefSeq	ILMN_218409	ILMN_218409	HRASLS5	NM_025731.2	NM_025731.2		66727	141803065	NM_025731.2	Hrasls5	NP_080007.1	ILMN_1214802	006420575	S	519	TGAACATTGGGCCATCTATGTGGAAGATGACTGCGTGGTCCACCTGGCTC	19	+	7693816-7693865	19qA	Mus musculus HRAS-like suppressor family, member 5 (Hrasls5), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	1700086E08Rik; 4921526K24Rik; 1700055A14Rik	1700086E08Rik; 4921526K24Rik; 1700055A14Rik
Mus musculus	MEEBO	ILMN_188747	ILMN_188747	SCL0003471.1_340	scl0003471.1_340	AK019079.1			12859098	AK019079.1	scl0003471.1_340		ILMN_2455361	007510041	S	18	CTCAAGTCCCAGAGGTCGAAGCTCCCCAGAAGATGACGGGGACGTCAGAA										
Mus musculus	RefSeq	ILMN_222203	ILMN_259644	EG626175	XM_908326.3	XM_908326.3		626175	149255986	XM_908326.3	EG626175	XP_913419.1	ILMN_2746234	000610021	S	331	TGTCATTCGGAACATTGTAGAAGCCGCTGCTGTCAGGGACATATCTGAAG				6qG3	PREDICTED: Mus musculus predicted gene, EG626175 (EG626175), mRNA.					
Mus musculus	RefSeq	ILMN_212809	ILMN_212809	TMEM37	NM_019432.2	NM_019432.2		170706	31980888	NM_019432.2	Tmem37	NP_062305.1	ILMN_1230151	001240520	S	916	CTGGAATAGGGTTTGAAAGAGACCAAAAGTCAGTTCCAGAATGGCTGCCC	1	-	121964005-121964054	1qE2.3	Mus musculus transmembrane protein 37 (Tmem37), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	Pr1; AI173373; Pr; AW540203	Pr1; AI173373; Pr; AW540203
Mus musculus	MEEBO	ILMN_186647	ILMN_186647	LIG3	scl41152.22_419				6754545	NM_010716	Lig3		ILMN_1256377	005860561	S	3576	GGCTGGCAGAGCCTACTTCCTGTCGTCCTCGCTTCCATGTGCATCTTAAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m) [goid 3910] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190889	ILMN_190889	V1RC17	NM_134172.1	NM_134172.1		171190	21717664	NM_134172.1	V1rc17	NP_598933.1	ILMN_2474156	002000102	S	908	TTAAAAAAGATATTTATTCCTCCGGTCTGTGCCAGCATCATGCCACTTTG	6	-	57958239-57958288	6qB3	Mus musculus vomeronasal 1 receptor, C17 (V1rc17), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_215595	ILMN_215595	PUS7L	NM_172437.2	NM_172437.2		78895	142378714	NM_172437.2	Pus7l	NP_766025.1	ILMN_1252373	000110255	S	2676	TACTCCTGTCGGTACCCACGTTCTATTTCTAACACATACCAACGACATTG	15	-	94353176-94353225	15qE3	Mus musculus pseudouridylate synthase 7 homolog (S. cerevisiae)-like (Pus7l), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine in a tRNA molecule [goid 31119] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]	3000003F02Rik	3000003F02Rik
Mus musculus	RefSeq	ILMN_188714	ILMN_311712	LOC100046087	XM_001475552.1	XM_001475552.1		100046087	149271912	XM_001475552.1	LOC100046087	XP_001475602.1	ILMN_2455089	004860482	S	383	CCCTGCTAATCTCGTAACACCTGGAAGAAAGAAGCTCAACCACCATGAAA					PREDICTED: Mus musculus similar to X-linked lymphocyte-regulated 4A (LOC100046087), mRNA.					
Mus musculus	Riken	ILMN_206694	ILMN_206694	C130081M21RIK	ri|C130081M21|PX00171F24|AK081848|1705					AK081848	C130081M21Rik		ILMN_1240397	004640148	S	1356	CAGTCCATCACAGCAGGGGAAGGCTTGACAGCAGGAGGGTGAGACAGTTG										
Mus musculus	RefSeq	ILMN_201272	ILMN_201272	LOC382136	XM_358710.1	XM_358710.1			38090313	XM_358710.1	LOC382136		ILMN_1216951	000060433	S	302	GTAACCTGCGGGGCCCTGTAATTGCTCTGGAGTTGCCTGGGACTTTGCGA										
Mus musculus	MEEBO	ILMN_221312	ILMN_221312	D430020F16	scl32510.13.1_228	NM_172902.1			27370381	NM_172902.1	D430020F16		ILMN_2733810	005670470	S	3300	GATTCAGTTCTGCTGTGGTTTTGGTGCTGGGGTAGAGCCTCCCTTTGTGA										
Mus musculus	RefSeq	ILMN_220090	ILMN_312021	VMN2R29	NR_003555.1	NR_003555.1		76229	147907359	NR_003555.1	Vmn2r29		ILMN_1252001	006450095	S	1389	GCAGGACACAGGTAAGACAGTATTCTAGGAAAGAGAGATAAGGTGTCCTC				7qA1	Mus musculus vomeronasal 2, receptor 29 (Vmn2r29), transcript variant 2, transcribed RNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194961	ILMN_217913	HIF1A	NM_010431.1	NM_010431.1		15251	7363432	NM_010431.1	Hif1a	NP_034561.1	ILMN_2511256	000430661	S	484	CCGGCATCCAGAAGTTTTCTCACACGTAAATAACTGATGGTGAGCCTCAT	12	+	75027732-75027734:75028973-75029019	12qC3	Mus musculus hypoxia inducible factor 1, alpha subunit (Hif1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]; Any process that modulates the activity of an enzyme [goid 50790] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence ISO]; The chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 42541] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The chemical reactions and pathways involving lactate, the anion of lactic acid [goid 6089] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of epithelial cell migration [goid 10634] [evidence IMP]; The chemical reactions and pathways involving elastin, a glycoprotein which is randomly coiled and cross linked to form elastic fibres that are found in connective tissue [goid 51541] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle activity stimulus [goid 14850] [evidence IMP]; The series of events leading to growth of connective tissue when loss of tissues that are incapable of regeneration occurs, or when fibrinous exudate cannot be adequately cleared during or following an inflammatory response [goid 2248] [evidence IMP]; The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IGI]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 43619] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]	AA959795; HIF-1alpha; MOP1	AA959795; HIF-1alpha; MOP1
Mus musculus	RefSeq	ILMN_217913	ILMN_217913	HIF1A	NM_010431.1	NM_010431.1		15251	7363432	NM_010431.1	Hif1a	NP_034561.1	ILMN_2852034	000870246	S	2208	GCATCTCCATCTTCTACCCAAGTACCTCAAGAAACGACCACTGCTAAGGC	12	+	75043197-75043246	12qC3	Mus musculus hypoxia inducible factor 1, alpha subunit (Hif1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IMP]; Any process that modulates the activity of an enzyme [goid 50790] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence ISO]; The chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 42541] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The chemical reactions and pathways involving lactate, the anion of lactic acid [goid 6089] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of epithelial cell migration [goid 10634] [evidence IMP]; The chemical reactions and pathways involving elastin, a glycoprotein which is randomly coiled and cross linked to form elastic fibres that are found in connective tissue [goid 51541] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle activity stimulus [goid 14850] [evidence IMP]; The series of events leading to growth of connective tissue when loss of tissues that are incapable of regeneration occurs, or when fibrinous exudate cannot be adequately cleared during or following an inflammatory response [goid 2248] [evidence IMP]; The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IGI]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 43619] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IGI]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]	AA959795; HIF-1alpha; MOP1	AA959795; HIF-1alpha; MOP1
Mus musculus	RefSeq	ILMN_218134	ILMN_316446	LOC100046081	XM_001476586.1	XM_001476586.1		100046081	149270308	XM_001476586.1	LOC100046081	XP_001476636.1	ILMN_1237042	001340687	S	1287	GAGGTCTCAAGCCACCCATACAAAGCACTTACAGACTTGCTGTTCTGGCC					PREDICTED: Mus musculus similar to OTU domain, ubiquitin aldehyde binding 1 (LOC100046081), mRNA.					
Mus musculus	RefSeq	ILMN_211602	ILMN_245842	9930012K11RIK	NM_001004155.1	NM_001004155.1		268759	51921302	NM_001004155.1	9930012K11Rik	NP_001004155.1	ILMN_2617552	003400735	S	1397	GGCTCTTCCTCCTCATCAGAAATCTCTGGGCTTAGGCAATGTGAATTGAC	14	-	70554731-70554780	14qD2	Mus musculus RIKEN cDNA 9930012K11 gene (9930012K11Rik), mRNA.				MGC91159; AU016692	MGC91159; AU016692
Mus musculus	RefSeq	ILMN_197776	ILMN_227843	LOC435145	XM_987106.1	XM_987106.1		435145	94399138	XM_987106.1	LOC435145	XP_992200.1	ILMN_1250392	000010521	S	1744	TTTTACAGCAGCGCGGGCAGAGGACCCCGGCACCTGAGCACCAACAGCAA				15qE1	PREDICTED: Mus musculus similar to hCG1788605 (LOC435145), mRNA.					
Mus musculus	RefSeq	ILMN_218582	ILMN_218582	NENF	NM_025424.1	NM_025424.1		66208	13384817	NM_025424.1	Nenf	NP_079700.1	ILMN_2941728	002230403	S	561	GCCGGTTCTAGGGAGAAGTGAGGGGACAGGAGTTAAGTGTCCCTCGGAAC	1	-	193007459-193007508	1qH6	Mus musculus neuron derived neurotrophic factor (Nenf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	SCIRP10; 1110060M21Rik; Spuf	SCIRP10; 1110060M21Rik; Spuf
Mus musculus	RefSeq	ILMN_220607	ILMN_220607	OLFR1173	NM_207566.1	NM_207566.1		404329	46430583	NM_207566.1	Olfr1173	NP_997449.1	ILMN_1252315	000620220	S	602	CCATGTTAAATGAGGTTAGTAGTCTTCTTATCACTATGACCTCCTATGTC	2	-	88114553-88114602	2qD	Mus musculus olfactory receptor 1173 (Olfr1173), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC123638; MGC129197; MGC129196	MGC123638; MGC129197; MGC129196
Mus musculus	RefSeq	ILMN_185478	ILMN_232018	ZFP148	NM_011749.4	NM_011749.4		22661	145386588	NM_011749.4	Zfp148	NP_035879.1	ILMN_2427349	005570632	S	9295	CTACTATTCATTCCCTAGATCCCGGTTCTTGAGTGATTTGGCTTGGTGGG				16qB3	Mus musculus zinc finger protein 148 (Zfp148), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ZBP-89; BFCOL1; BERF-1; AI480666; 2210405J08Rik; AW045217	ZBP-89; BFCOL1; BERF-1; AI480666; 2210405J08Rik; AW045217
Mus musculus	RefSeq	ILMN_185478	ILMN_232018	ZFP148	NM_011749.4	NM_011749.4		22661	145386588	NM_011749.4	Zfp148	NP_035879.1	ILMN_2456243	002810739	S	5792	CCACAGGTGAGGGACACTTGCAAAGTGCCAGCAAGGCTAGATGTTTTGCC				16qB3	Mus musculus zinc finger protein 148 (Zfp148), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ZBP-89; BFCOL1; BERF-1; AI480666; 2210405J08Rik; AW045217	ZBP-89; BFCOL1; BERF-1; AI480666; 2210405J08Rik; AW045217
Mus musculus	Riken	ILMN_204389	ILMN_204389	KIF13A	ri|9930023M01|PX00120K04|AK036909|1556					AK036909	Kif13a		ILMN_2564604	004210215	S	976	GTGGGAGTCACGGCAGATGTATAATTGACAGACGAGTCGGTATGAGACTC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]		
Mus musculus	Riken	ILMN_204832	ILMN_204832	C530044D11RIK	ri|C530044D11|PX00083O19|AK049717|2342					AK049717	C530044D11Rik		ILMN_2567946	004200168	S	2060	CCAAGTTGGCTGTGTGACTAGATGGGCTGAGACAGACAGAACTGGCTTGG										
Mus musculus	RefSeq	ILMN_225474	ILMN_225474	SLY	NM_201530.1	NM_201530.1		382301	51092288	NM_201530.1	Sly	NP_963288.1	ILMN_2783107	000130347	S	685	GAAGTCCATGGAGGTTTTGATGAACTTGGGGACCAAGAACTAAGAAATGC	Y|NT_166353.1	-	392265-392272:392273-392302:392662-392673		Mus musculus Sycp3 like Y-linked (Sly), mRNA.					
Mus musculus	Riken	ILMN_202449	ILMN_202449	4930447F20RIK	ri|4930447F20|PX00031P09|AK015403|1854					AK015403	4930447F20Rik		ILMN_2549697	005960707	S	149	GGGCAGAGGCTTCCAAAAAATACTCCTCCATGCCAGCAAGTAGATCAGCC										
Mus musculus	RefSeq	ILMN_201593	ILMN_258029	SPIB	NM_019866.1	NM_019866.1		272382	61969657	NM_019866.1	Spib	NP_063919.1	ILMN_1233927	005870731	S	535	AAGCTGCGCCTGTACCAGTTCTTGCTGGGGTTGCTCCTACGCGGGGACAT	7	-	51783566-51783615	7qB4	Mus musculus Spi-B transcription factor (Spi-1/PU.1 related) (Spib), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Spi-B	Spi-B
Mus musculus	RefSeq	ILMN_258029	ILMN_258029	SPIB	NM_019866.1	NM_019866.1		272382	61969657	NM_019866.1	Spib	NP_063919.1	ILMN_2933168	003840392	S	2642	GGAACTCACCTCTGTGGGTGGCCGGGAGGGGGAACAGGGTCATGGAAGAT	7	-	51781459-51781508	7qB4	Mus musculus Spi-B transcription factor (Spi-1/PU.1 related) (Spib), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	Spi-B	Spi-B
Mus musculus	RefSeq	ILMN_197912	ILMN_197912	LOC242879	XM_144221.2	XM_144221.2			38079579	XM_144221.2	LOC242879		ILMN_2588068	004730465	S	7926	GCCGTCCAAGTTCATCACAGAGGAGCCCTCCCAGGCCCTCAAGAAAGAAT										
Mus musculus	RefSeq	ILMN_256050	ILMN_256050	USP6NL	NM_001080548.1	NM_001080548.1		98910	123173783	NM_001080548.1	Usp6nl	NP_001074017.1	ILMN_3158341	005130450	A	4577	CACGGGCTCACCAGCAGCGTTTACCCACGCTGTGCTTCTCTGCTTGCATT	2	+	6364619-6364668	2qA1	Mus musculus USP6 N-terminal like (Usp6nl), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	TRE2NL; RNTRE; mKIAA0019; AI316785	TRE2NL; RNTRE; mKIAA0019; AI316785
Mus musculus	RefSeq	ILMN_256050	ILMN_256050	USP6NL	NM_001080548.1	NM_001080548.1		98910	123173783	NM_001080548.1	Usp6nl	NP_001074017.1	ILMN_3079038	007560288	I	225	CCCTGGACAGCAGATCTTGGTTTAATACTGGATTGGAACAACACCCACAG	2	+	6257440-6257489	2qA1	Mus musculus USP6 N-terminal like (Usp6nl), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	TRE2NL; RNTRE; mKIAA0019; AI316785	TRE2NL; RNTRE; mKIAA0019; AI316785
Mus musculus	RefSeq	ILMN_216693	ILMN_216693	BTNL9	NM_172793.2	NM_172793.2		237754	142374929	NM_172793.2	Btnl9	NP_766381.1	ILMN_1238527	003520112	S	2112	CATGTATGTGGCAATTCGAACATGAAATTCAATAATGGCAGTGATGTGGC	11	-	48982128-48982177	11qB1.2	Mus musculus butyrophilin-like 9 (Btnl9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Btn3; RP23-10M12.3; B430208I01; D330012D11Rik	Btn3; RP23-10M12.3; B430208I01; D330012D11Rik
Mus musculus	RefSeq	ILMN_201335	ILMN_201335	LOC385050	XM_358018.1	XM_358018.1			38091029	XM_358018.1	LOC385050		ILMN_1235198	003180327	S	389	TGTCCCCAAAAACTACTCCACCAAGTCCAGATACTGAAGCGCCCTCAGGC										
Mus musculus	RefSeq	ILMN_187855	ILMN_241295	1810030N24RIK	NM_025471.2	NM_025471.2		66291	142348730	NM_025471.2	1810030N24Rik	NP_079747.1	ILMN_1246756	001820451	S	217	GCTAAATAGCTTCTGGCCTCTGAGGAACTCAGACTGGCTGGTCAGCTGCC	4	-	34719150-34719199	4qA5	Mus musculus RIKEN cDNA 1810030N24 gene (1810030N24Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-76M15.5; 2810406B13Rik	RP23-76M15.5; 2810406B13Rik
Mus musculus	RefSeq	ILMN_187855	ILMN_241295	1810030N24RIK	NM_025471.2	NM_025471.2		66291	142348730	NM_025471.2	1810030N24Rik	NP_079747.1	ILMN_1221983	005260523	S	811	CCATTTGCATGGAGTTTCTAACGTTTTAGAGTGGATTGTGCCTTTGCAGC	4	-	34715987-34716036	4qA5	Mus musculus RIKEN cDNA 1810030N24 gene (1810030N24Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RP23-76M15.5; 2810406B13Rik	RP23-76M15.5; 2810406B13Rik
Mus musculus	RefSeq	ILMN_222872	ILMN_222872	PCSK9	NM_153565.1	NM_153565.1		100102	23956351	NM_153565.1	Pcsk9	NP_705793.1	ILMN_2756023	003360053	S	3355	GGCCACACCAGCTGACCAGCACACCTCTATCCTTTTGAGCTCTTCTGTCT	4	-	106115061-106115110	4qC7	Mus musculus proprotein convertase subtilisin/kexin type 9 (Pcsk9), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment [goid 9267] [evidence IDA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IDA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IDA]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IDA]; Any process that stops or reduces the activity of an enzyme [goid 43086] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence ISS]; Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein [goid 16540] [evidence ISS]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence ISS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of low-density lipoprotein receptors [goid 32803] [evidence IMP]; The chemical reactions and pathways involving low-density lipoprotein receptors [goid 32799] [evidence IDA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [pmid 12552133] [evidence IEP]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [pmid 12552133] [evidence IEP]; Generation of cells within the nervous system [goid 22008] [pmid 12552133] [evidence IEP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [evidence IDA]	AI747682; HCHOLA3; FH3; AI415265; MGC47409; Narc1	AI747682; HCHOLA3; FH3; AI415265; MGC47409; Narc1
Mus musculus	MEEBO	ILMN_210287	ILMN_210287	6130401J04RIK	scl16970.11_231				51704845	XM_484835	6130401J04Rik		ILMN_2604105	004250242	S	1052	GCTAAAAGGCTTGGAGGAATGAATAGTACTTCTTTAAAATAACATTATAA										
Mus musculus	RefSeq	ILMN_201508	ILMN_201508	LOC385277	XM_358165.1	XM_358165.1			38095651	XM_358165.1	LOC385277		ILMN_2542553	007380064	S	2	TGGTCATATTGTCCAGTGGAGAAATTGTGCTCACCCAGTCTCCAGCACTC										
Mus musculus	RefSeq	ILMN_222543	ILMN_222543	OLFR1362	NM_146744.1	NM_146744.1		258739	22129356	NM_146744.1	Olfr1362	NP_666955.1	ILMN_2751183	001400161	S	575	TCGCCCGGTGGAAATGTTGTCCTTCACTTTGGCCATCCTTATTGTCCTGC	13	-	21703212-21703261	13qA3.1	Mus musculus olfactory receptor 1362 (Olfr1362), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-138F20.18; MOR256-8	RP23-138F20.18; MOR256-8
Mus musculus	RefSeq	ILMN_187733	ILMN_232449	ALG14	NM_024178.2	NM_024178.2		66789	118130268	NM_024178.2	Alg14	NP_077140.1	ILMN_2605575	006350647	S	587	GGGAAGATCCTGAGGCACCTCTCCGACTACTTCATTGTTCAGTGGCCCAC	3	+	121064606-121064655	3qG1	Mus musculus asparagine-linked glycosylation 14 homolog (yeast) (Alg14), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			AI854024; 5430428G01Rik	AI854024; 5430428G01Rik
Mus musculus	RefSeq	ILMN_196805	ILMN_190932	WBSCR17	NM_145218.3	NM_145218.3		212996	110347503	NM_145218.3	Wbscr17	NP_660253.2	ILMN_2525866	004480600	S	2046	CTTGAACATGGAAGGACCTCCATGCTGCCACCACAGAGCCATACCTTGAT	5	-	131382540-131382589	5qG2	Mus musculus Williams-Beuren syndrome chromosome region 17 homolog (human) (Wbscr17), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	AA388321; E330012B09Rik	AA388321; E330012B09Rik
Mus musculus	RefSeq	ILMN_205499	ILMN_190932	WBSCR17	NM_145218.3	NM_145218.3		212996	110347503	NM_145218.3	Wbscr17	NP_660253.2	ILMN_1214681	005090639	S	309	TCTTCTCAGAGTGATGGAGAGAGCCGGTGAGCTGAACAAAGACACCCGCC	5	-	131783034-131783083	5qG2	Mus musculus Williams-Beuren syndrome chromosome region 17 homolog (human) (Wbscr17), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	AA388321; E330012B09Rik	AA388321; E330012B09Rik
Mus musculus	RefSeq	ILMN_190932	ILMN_190932	WBSCR17	NM_145218.3	NM_145218.3		212996	110347503	NM_145218.3	Wbscr17	NP_660253.2	ILMN_2474553	004670360	S	3964	CCCTGGATCACGGGCCCAGAGGATATGTCTGGGTCTTACATGCTAGGGTA	5	-	131351003-131351052	5qG2	Mus musculus Williams-Beuren syndrome chromosome region 17 homolog (human) (Wbscr17), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	AA388321; E330012B09Rik	AA388321; E330012B09Rik
Mus musculus	Riken	ILMN_204375	ILMN_204375	9630038C08RIK	ri|9630038C08|PX00116O10|AK036131|3133					AK036131	9630038C08Rik		ILMN_2564493	004050215	S	2450	GTCAAGGGCCCAAGCGCCACACAATGATAGCGTTCCATACCCTGGAAACC										
Mus musculus	RefSeq	ILMN_189917	ILMN_259501	C030045D06RIK	NM_001033636.3	NM_001033636.3		109294	146198567	NM_001033636.3	C030045D06Rik	NP_001028808.1	ILMN_2465578	004010064	S	579	GAGCCACCACCTCCAGTAGGAGAAGAATGAGCATTCCACGTGCCATGGGA				1qA2	Mus musculus RIKEN cDNA C030045D06 gene (C030045D06Rik), mRNA.				D430013K02; AI316880; AI553603	D430013K02; AI316880; AI553603
Mus musculus	RefSeq	ILMN_199210	ILMN_310705	LOC100041796	XM_001478054.1	XM_001478054.1		100041796	149262506	XM_001478054.1	LOC100041796	XP_001478104.1	ILMN_1243651	007330020	S	460	ATCCCAGCGAGGCGGGGGAAGCACTTTGTCATGTAGACGGCTGTGGAAGA	11	-	100140222-100140271	11qD	PREDICTED: Mus musculus hypothetical protein LOC100041796, transcript variant 1 (LOC100041796), mRNA.					
Mus musculus	MEEBO	ILMN_189150	ILMN_189150	SCL0002547.1_9	scl0002547.1_9	AK088491.1			26104828	AK088491.1	scl0002547.1_9		ILMN_2458792	004810598	S	3	TGGCTCACCTCTTACTCCGGCTAAAAGACCTAAGAGGAAAGTTGCCCCTA										
Mus musculus	RefSeq	ILMN_191236	ILMN_236431	6030446N20RIK	NM_178801.2	NM_178801.2		338363	31342203	NM_178801.2	6030446N20Rik	NP_848916.1	ILMN_2610650	004150561	S	2919	GAGTCCTCAGGTGGAGAGAACCACACAGCTACTAATCCCAGCGCCATCTC	18	-	12125019-12125068	18qA1	Mus musculus RIKEN cDNA 6030446N20 gene (6030446N20Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	Riken	ILMN_204303	ILMN_204303	6330417E04RIK	ri|6330417E04|PX00008D24|AK031844|2154					AK031844	6330417E04Rik		ILMN_1228307	000150041	S	1892	GTATGTATATACCCCTAGGTCCATTCGTTTGATGGCACGAAGGAAGCAGC										
Mus musculus	Riken	ILMN_205684	ILMN_205684	E130306P09RIK	ri|E130306P09|PX00208B22|AK053751|3541					AK053751	E130306P09Rik		ILMN_1222191	005810324	S	3245	GAGAGGAATAAGAACCATGACAGGAAGCAGAGGAGGGCAGATGGGGCTTG										
Mus musculus	RefSeq	ILMN_186519	ILMN_234169	NKD1	NM_027280.2	NM_027280.2		93960	31980621	NM_027280.2	Nkd1	NP_081556.2	ILMN_2696611	000380288	S	1453	TGGTGGTGTACGAGAGCCAGGCTGGGCAGGCCGTCCAGAGACACGAACAC	8	+	91115951-91116000	8qC3	Mus musculus naked cuticle 1 homolog (Drosophila) (Nkd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9030215G15Rik; 2810434J10Rik	9030215G15Rik; 2810434J10Rik
Mus musculus	RefSeq	ILMN_234169	ILMN_234169	NKD1	NM_027280.2	NM_027280.2		93960	31980621	NM_027280.2	Nkd1	NP_081556.2	ILMN_2916283	002650020	S	135	AGCATGGGGAAACTTCACTCGAAGCCGGCCGCCGTGTGCAAGCGCAGGGA	8	+	91045403-91045405:91045406-91045430:91045546-91045567	8qC3	Mus musculus naked cuticle 1 homolog (Drosophila) (Nkd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	9030215G15Rik; 2810434J10Rik	9030215G15Rik; 2810434J10Rik
Mus musculus	RefSeq	ILMN_208810	ILMN_208810	LRIT1	NM_146245.1	NM_146245.1		239037	22122826	NM_146245.1	Lrit1	NP_666357.1	ILMN_2589757	003420070	S	4153	GCCTCTAAGATGTCCAGATTCTTGATCTCAATGTATCAACTTTCCTACCT	14	+	37877954-37878003	14qB	Mus musculus leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 (Lrit1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC40670; Lrrc21; BC032270	MGC40670; Lrrc21; BC032270
Mus musculus	RefSeq	ILMN_196822	ILMN_208810	LRIT1	NM_146245.1	NM_146245.1		239037	22122826	NM_146245.1	Lrit1	NP_666357.1	ILMN_2525924	001260608	S	369	CTACCTTACAATGCTCTCAGTGAGCTTAGTGCCCTCATGCTCAGGGGCCT	14	+	37870565-37870614	14qB	Mus musculus leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 (Lrit1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC40670; Lrrc21; BC032270	MGC40670; Lrrc21; BC032270
Mus musculus	RefSeq	ILMN_211075	ILMN_211075	ABCA9	NM_147220.2	NM_147220.2		217262	153792542	NM_147220.2	Abca9	NP_671753.2	ILMN_1253984	001450753	S	5740	GTCTGTGAATGCTACAACCTCTCTACTGCAACATCAGTACAGTTACCTGG				11qE1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 9 (Abca9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	D630040K07Rik	D630040K07Rik
Mus musculus	RefSeq	ILMN_211075	ILMN_211075	ABCA9	NM_147220.2	NM_147220.2		217262	153792542	NM_147220.2	Abca9	NP_671753.2	ILMN_2699881	006040332	S	4554	TCCTGGGGAACCCTCCTGTGGTACTTCTGGATGAGCCATCGACTGGGATG				11qE1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 9 (Abca9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	D630040K07Rik	D630040K07Rik
Mus musculus	RefSeq	ILMN_213993	ILMN_234804	MKI67	XM_001000692.2	XM_001000692.2		17345	149258042	XM_001000692.2	Mki67	XP_001000692.2	ILMN_1222340	004490110	S	2767	TGCTGAGGAACTACTTAGTCAAGGACAAGGAACCATACAAAACCTAGAGG				7qF3	PREDICTED: Mus musculus antigen identified by monoclonal antibody Ki 67 (Mki67), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IDA]			
Mus musculus	RefSeq	ILMN_213993	ILMN_234804	MKI67	XM_001000692.2	XM_001000692.2		17345	149258042	XM_001000692.2	Mki67	XP_001000692.2	ILMN_2740902	005360129	S	9304	CTTGAGGTCTAGAGGAACGACTGAGATGCCCCAGCCTTGTGAAGCAGAAG				7qF3	PREDICTED: Mus musculus antigen identified by monoclonal antibody Ki 67 (Mki67), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IDA]			
Mus musculus	RefSeq	ILMN_213993	ILMN_234804	MKI67	XM_001000692.2	XM_001000692.2		17345	149258042	XM_001000692.2	Mki67	XP_001000692.2	ILMN_1245049	005220553	S	9013	CGTGTCAAACAAACTTGAATCTGTGGAAGAGCAGGTTAGCACTGTTATGA				7qF3	PREDICTED: Mus musculus antigen identified by monoclonal antibody Ki 67 (Mki67), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IDA]			
Mus musculus	RefSeq	ILMN_211232	ILMN_211232	SF3A3	NM_029157.3	NM_029157.3		75062	124249078	NM_029157.3	Sf3a3	NP_083433.1	ILMN_2613841	004230050	S	1511	GAGGATCTGAAAAGACAAGGGCTGCTCTAGTGCTCGGTTCCCTGAGAAGC	4	+	124409480-124409509:124409510-124409529	4qD2.2	Mus musculus splicing factor 3a, subunit 3 (Sf3a3), mRNA. XM_983572 XM_992567 XM_992590 XM_992606	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	60kDa; MGC103282; 4930512K19Rik	60kDa; MGC103282; 4930512K19Rik
Mus musculus	RefSeq	ILMN_190142	ILMN_256643	IDE	NM_031156.2	NM_031156.2		15925	121583921	NM_031156.2	Ide	NP_112419.2	ILMN_2467534	005090433	S	4662	CCTGAGTGTTCGAATCCATCGTTGTAAACACAAACAACAGTCTGCTACCT	19	-	37343495-37343544	19qC2	Mus musculus insulin degrading enzyme (Ide), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1300012G03Rik; AA675336; AI507533; 4833415K22Rik	1300012G03Rik; AA675336; AI507533; 4833415K22Rik
Mus musculus	RefSeq	ILMN_190142	ILMN_256643	IDE	NM_031156.2	NM_031156.2		15925	121583921	NM_031156.2	Ide	NP_112419.2	ILMN_1243499	001510477	S	3025	CATGACTGAGTTCAAGCGTGGCCTGCCACTGTTTCCCCTCGTGAAACCAC	19	-	37345132-37345181	19qC2	Mus musculus insulin degrading enzyme (Ide), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1300012G03Rik; AA675336; AI507533; 4833415K22Rik	1300012G03Rik; AA675336; AI507533; 4833415K22Rik
Mus musculus	RefSeq	ILMN_219982	ILMN_219982	KLHL13	NM_026167.3	NM_026167.3		67455	146134897	NM_026167.3	Klhl13	NP_080443.1	ILMN_1215124	000010767	S	3093	CTCTTGGTTCATGAGGTTATTTAGCACAAAGTGTAACAGCTTCACCTGGG				XqA2	Mus musculus kelch-like 13 (Drosophila) (Klhl13), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI451128; Bklhd2; mKIAA1309; 1200009K10Rik; D130072F20Rik	AI451128; Bklhd2; mKIAA1309; 1200009K10Rik; D130072F20Rik
Mus musculus	RefSeq	ILMN_216526	ILMN_249754	DDHD2	XM_356065.5	XM_356065.5		72108	94383181	XM_356065.5	Ddhd2	XP_356065.3	ILMN_2672113	004150768	S	4288	GCAAGGGACCTGGGTGTGGACCTGCACTGCGTCGTCTGTTATCATGCACA	8	-	27191114-27191163		PREDICTED: Mus musculus DDHD domain containing 2 (Ddhd2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209863	ILMN_209863	9530053A07RIK	NM_176924.4	NM_176924.4		319482	146198536	NM_176924.4	9530053A07Rik	NP_795898.1	ILMN_2599917	006560129	S	2761	TTCATTGTAACACTAAATGCTCTCACTAAAGTGTAGTATAAGTAATAACT				7qA3	Mus musculus RIKEN cDNA 9530053A07 gene (9530053A07Rik), mRNA.				FCGBP	FCGBP
Mus musculus	MEEBO	ILMN_215311	ILMN_215311	ALDOA-PS1	scl43195.1.780_25	NM_025754.1			13385219	NM_025754.1	Aldoa-ps1		ILMN_2657963	006420132	S	1375	TTGCTGGGCGCGGAGGTGGCAGGTATCACATTTTTAGGGTATGTCTGTAA										
Mus musculus	RefSeq	ILMN_244672	ILMN_244672	D12ERTD553E	NM_029758.3	NM_029758.3		76820	34328512	NM_029758.3	D12Ertd553e	NP_084034.2	ILMN_2983525	000610491	S	4582	GGTTGCACATCAGAAGGGGCTTTGAAGCGCTTGTATGTTGTTTGCCGGAG	12	+	12383001-12383050	12qA1.1	Mus musculus DNA segment, Chr 12, ERATO Doi 553, expressed (D12Ertd553e), mRNA.				2410157M17Rik; 9630047E15	2410157M17Rik; 9630047E15
Mus musculus	MEEBO	ILMN_184979	ILMN_184979	ZFP445	scl35183.1.1_59	NM_173364.3			40254403	NM_173364.3	Zfp445		ILMN_2425032	007400576	S	20	GGACAAAGTCATCCAGAGACGAATGGCAAGGAATCTGGTTAGGATGTGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_220497	ILMN_220497	4933436N17RIK	scl11478.1.1_108				51767622	XM_488671	4933436N17Rik		ILMN_2722843	003840435	S	1158	GGTGGGAGACTGGCAAAGACTGGTCTGGGTCCATACATCAAGAGGGAGAC										
Mus musculus	RefSeq	ILMN_232407	ILMN_232407	PGAM5	NM_028273.1	NM_028273.1		72542	58037292	NM_028273.1	Pgam5	NP_082549.1	ILMN_2802714	004900458	S	1814	GCCCAGGCTGGCTTCAAACTTGAGACCCTTCTCCATCTTGTAAATGTTGG	5	-	110499632-110499681	5qF	Mus musculus phosphoglycerate mutase family member 5 (Pgam5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	2610528A17Rik	2610528A17Rik
Mus musculus	RefSeq	ILMN_198226	ILMN_198226	LOC231620	XM_144516.3	XM_144516.3			38082985	XM_144516.3	LOC231620		ILMN_1230495	004830333	S	4130	CAGCTCTGCACCAACTCTTGTATCGGCGTGAGAAACAGGCAGGGAGCCGA										
Mus musculus	RefSeq	ILMN_211055	ILMN_257556	OLFR450	NM_146445.1	NM_146445.1		258437	33238923	NM_146445.1	Olfr450	NP_666656.1	ILMN_1240945	003360500	S	759	TGGGGCCACAATCTTCACTTACCTAGGACCACGTTCTGCCTCATCTGAGG	6	+	42768230-42768279	6qB2.1	Mus musculus olfactory receptor 450 (Olfr450), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR257-3	MOR257-3
Mus musculus	RefSeq	ILMN_211646	ILMN_211646	C130079G13RIK	NM_177661.3	NM_177661.3		229333	142375785	NM_177661.3	C130079G13Rik	NP_808329.1	ILMN_1232462	004880050	S	2460	GCCATTACGTATGGTAGTACCCACTGAATTATAGATTGTAGGGAGAAATA	3	+	59741542-59741591	3qD	Mus musculus RIKEN cDNA C130079G13 gene (C130079G13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188231	ILMN_188231	TPBG	NM_011627.3	NM_011627.3		21983	142383755	NM_011627.3	Tpbg	NP_035757.2	ILMN_1250696	001580431	S	2189	GAGGAAATATTGCATCCCCAAACTGCCTGCAGACCGTAGCAAGCTCTTAC	9	+	85739263-85739312	9qE3.1	Mus musculus trophoblast glycoprotein (Tpbg), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5T4; AW495680	5T4; AW495680
Mus musculus	RefSeq	ILMN_254824	ILMN_254824	CSAD	NM_144942.1	NM_144942.1		246277	21450350	NM_144942.1	Csad	NP_659191.1	ILMN_2810624	006620053	S	1386	AGCCCGAGTTCGTCAACGTGTGCTTCTGGTTTGTGCCTCCAAGCCTTCGG	15	-	102006601-102006650	15qF3	Mus musculus cysteine sulfinic acid decarboxylase (Csad), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways involving taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats [goid 19530] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including taurine [goid 19452] [evidence TAS]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: 3-sulfino-L-alanine = hypotaurine + CO2 [goid 4782] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence TAS]	Csd	Csd
Mus musculus	RefSeq	ILMN_223653	ILMN_223653	GLIS1	NM_147221.2	NM_147221.2		230587	124377992	NM_147221.2	Glis1	NP_671754.2	ILMN_1219823	001770376	S	2662	TTCCCACACGGGGCAGCAAGGCCACACCACAGGGTACTTCCCTACCTGGA	4	+	107307422-107307471	4qC7	Mus musculus GLIS family zinc finger 1 (Glis1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]	GliH1; Gli5; Gli6	GliH1; Gli5; Gli6
Mus musculus	RefSeq	ILMN_229953	ILMN_229953	MCAT	NM_001030014.2	NM_001030014.2		223722	118131188	NM_001030014.2	Mcat	NP_001025185.1	ILMN_2927635	000360673	S	565	CAAGAAGCATCCGAAGCCGTTCCCAGTGGGATGCTGTCTGTCCTTGGCCA	15	-	83379680-83379729	15qE1	Mus musculus malonyl CoA:ACP acyltransferase (mitochondrial) (Mcat), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: malonyl-CoA + [acyl-carrier protein] = CoA + malonyl-[acyl-carrier protein] [goid 4314] [evidence IEA]	BC025519; AI225907	BC025519; AI225907
Mus musculus	RefSeq	ILMN_211778	ILMN_229953	MCAT	NM_001030014.2	NM_001030014.2		223722	118131188	NM_001030014.2	Mcat	NP_001025185.1	ILMN_2619455	002710563	S	1685	GAACCGTGTAAGGTGTGGAGTGGGAACCCTGTCTTTCCTAGGCCAGCCTG	15	-	83377385-83377434	15qE1	Mus musculus malonyl CoA:ACP acyltransferase (mitochondrial) (Mcat), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: malonyl-CoA + [acyl-carrier protein] = CoA + malonyl-[acyl-carrier protein] [goid 4314] [evidence IEA]	BC025519; AI225907	BC025519; AI225907
Mus musculus	RefSeq	ILMN_211778	ILMN_229953	MCAT	NM_001030014.2	NM_001030014.2		223722	118131188	NM_001030014.2	Mcat	NP_001025185.1	ILMN_2750377	003520021	S	674	GTATAGAGAACCCAGTGTGCCAGGTGTCCAACTACCTCTTTCCTGACTGC	15	-	83379571-83379620	15qE1	Mus musculus malonyl CoA:ACP acyltransferase (mitochondrial) (Mcat), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: malonyl-CoA + [acyl-carrier protein] = CoA + malonyl-[acyl-carrier protein] [goid 4314] [evidence IEA]	BC025519; AI225907	BC025519; AI225907
Mus musculus	Riken	ILMN_204348	ILMN_204348	A930021K20RIK	ri|A930021K20|PX00066J03|AK044548|1881					AK044548	A930021K20Rik		ILMN_2564279	000360563	S	1341	GCTCAGCTCACTTTGTCATTTTCATTCAGCCGTGGACCCTGTCCTGTGGA										
Mus musculus	RefSeq	ILMN_197604	ILMN_197604	LOC333858	XM_289969.1	XM_289969.1			28481239	XM_289969.1	LOC333858		ILMN_2528714	005670131	S	375	GGAGGACTCAGGCACTTACTTCTGTGCTGCTGAGGCACAGTGCTCCCAGC										
Mus musculus	RefSeq	ILMN_217301	ILMN_217301	ACOXL	NM_028765.2	NM_028765.2		74121	142380979	NM_028765.2	Acoxl	NP_083041.1	ILMN_1223777	006400333	S	2687	CGCGACAAACGCTCCTCCGCGCTAAACTGTTACCAACCCTTCAGAAAAGC	2	+	127870165-127870191:127901583-127901605	2qF1	Mus musculus acyl-Coenzyme A oxidase-like (Acoxl), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + H2O2 [goid 3997] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	1200014P05Rik; AV025673	1200014P05Rik; AV025673
Mus musculus	RefSeq	ILMN_217303	ILMN_217303	LIPF	NM_026334.1	NM_026334.1		67717	13385835	NM_026334.1	Lipf	NP_080610.1	ILMN_2863532	003060630	S	1145	GGAGATTCTTCCCTACAATCACCTGGACTTCATCTGGGCGATGGATGCGC	19	+	34042602-34042651	19qC1	Mus musculus lipase, gastric (Lipf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]	2310051B21Rik; AV082900	2310051B21Rik; AV082900
Mus musculus	MEEBO	ILMN_208962	ILMN_208962	4921513I03RIK	scl38370.4.1_211				51765918	XM_483959	4921513I03Rik		ILMN_1256891	000670100	S	1391	CTCCCGAGACCTTGTGAAGGTTCTTGTCAAGTCTGGGTGATGGAAAGAGC										
Mus musculus	MEEBO	ILMN_215078	ILMN_215078	ASB16	scl40864.2.1_14	NM_148953.1			22507368	NM_148953.1	Asb16		ILMN_1226002	006200204	S	485	GCTCACATTTGGTGCCAAGGCTAATGTATCGTCTGAGGAGGGCATGACCC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_222136	ILMN_222136	PTDSS1	NM_008959.2	NM_008959.2		19210	31560650	NM_008959.2	Ptdss1	NP_032985.2	ILMN_2745130	001440438	S	3310	GTGGGCTGTAAAACAAACTTGCTACAAACAATCCTGCTGCTCACTCACCA	13	+	67099223-67099272	13qB3	Mus musculus phosphatidylserine synthase 1 (Ptdss1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 6659] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	mKIAA0024; AW539008; PSS-1; AU044268	mKIAA0024; AW539008; PSS-1; AU044268
Mus musculus	RefSeq	ILMN_214357	ILMN_227728	OLFR1320	NM_207240.2	NM_207240.2		236784	115529460	NM_207240.2	Olfr1320	NP_997123.2	ILMN_1230409	007200215	S	627	CCTGGTAACCCTGGTCCCCTTTGGACTAACTTTAGTCTCTTACTGGAAGA	X	+	47037307-47037356	XqA5	Mus musculus olfactory receptor 1320 (Olfr1320), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR122-3; GA_x6K02T2Q64A-11736563-11737522	MOR122-3; GA_x6K02T2Q64A-11736563-11737522
Mus musculus	MEEBO	ILMN_185849	ILMN_185849	PER3	scl2166.1.1_61				6755029	NM_011067	Per3		ILMN_1257393	006110753	S	4732	CGTCTGTCCTCTCACTGTCTGGTGCTCTGGTTTAAAGAAGCCCAAAGTTC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209320	ILMN_257072	OLFR923	NM_146816.1	NM_146816.1		258812	22129228	NM_146816.1	Olfr923	NP_667027.1	ILMN_2594699	001660133	S	664	ATCTCCTATGGTTTCATCATTGCTAACATCTTACGCATCAGCTCCACACA	9	+	38635941-38635990	9qA5.1	Mus musculus olfactory receptor 923 (Olfr923), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR164-2	MOR164-2
Mus musculus	RefSeq	ILMN_255457	ILMN_255457	CLRN1	NM_153384.2	NM_153384.2		229320	68533239	NM_153384.2	Clrn1	NP_700433.1	ILMN_3069934	001300427	I	430	ATCAATGAAGGAGAGGTACTCTCTGTATGAGGACAAAGGAGAGACAGCAG	3	-	58669073-58669073:58676623-58676671	3qD	Mus musculus clarin 1 (Clrn1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]		A130002D11Rik; Ush3a; USH3	A130002D11Rik; Ush3a; USH3
Mus musculus	RefSeq	ILMN_185277	ILMN_255457	CLRN1	NM_153384.2	NM_153384.2		229320	68533239	NM_153384.2	Clrn1	NP_700433.1	ILMN_2434674	000540136	S	363	GCCTTTTCCACGGAGAAGGCGTAAGGCAATGTGGGTTAGGAGCAAGGCCT	3	-	58688722-58688771	3qD	Mus musculus clarin 1 (Clrn1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]		A130002D11Rik; Ush3a; USH3	A130002D11Rik; Ush3a; USH3
Mus musculus	RefSeq	ILMN_185277	ILMN_255457	CLRN1	NM_153384.2	NM_153384.2		229320	68533239	NM_153384.2	Clrn1	NP_700433.1	ILMN_1235277	004900593	S	1047	TACAGAGCATGTAGTAAGGATTCAGGCTGGAAAATAACAGAAGCAGGAGG	3	-	58649936-58649985	3qD	Mus musculus clarin 1 (Clrn1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]		A130002D11Rik; Ush3a; USH3	A130002D11Rik; Ush3a; USH3
Mus musculus	RefSeq	ILMN_217820	ILMN_217820	9530002B09RIK	NM_023865.3	NM_023865.3		77432	115292435	NM_023865.3	9530002B09Rik	NP_076354.1	ILMN_1230372	000770156	S	666	CTGCTTACAAAGTAGAGTTTAGTCTCCTGCTACTTAACATAGCCGCTTTC	4	+	122382219-122382268	4qD2.2	Mus musculus RIKEN cDNA 9530002B09 gene (9530002B09Rik), mRNA.				Vpp1; Aump; RP23-332L16.1; Vppl	Vpp1; Aump; RP23-332L16.1; Vppl
Mus musculus	RefSeq	ILMN_222560	ILMN_222560	SLC4A10	NM_033552.1	NM_033552.1		94229	15809041	NM_033552.1	Slc4a10	NP_291030.1	ILMN_2751473	001450241	S	5232	CTGAATATCTTGAATGTAATTTATTGCAATGTTTAAGTACTGTGTAAATG	2	+	62164669-62164718	2qC1.3	Mus musculus solute carrier family 4, sodium bicarbonate cotransporter-like, member 10 (Slc4a10), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence ISO]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA];  [goid 15380] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA];  [goid 5452] [evidence IEA]	KIAA4136; mKIAA4136; NCBE	KIAA4136; mKIAA4136; NCBE
Mus musculus	RefSeq	ILMN_201023	ILMN_311955	LOC668779	XR_033402.1	XR_033402.1		668779	149257322	XR_033402.1	LOC668779		ILMN_1248416	005820482	S	411	GAAAACTCCAGCACCACACTCATCAGAAGGACGTTCTCGACAAAGTCGGA	7	+	58713822-58713871	7qB5	PREDICTED: Mus musculus similar to fusion protein: ubiquitin (bases 43_513); ribosomal protein S27a (bases 217_532) (LOC668779), misc RNA.					
Mus musculus	RefSeq	ILMN_236823	ILMN_236823	TAF1D	NM_029248.1	NM_029248.1		75316	21312925	NM_029248.1	Taf1d	NP_083524.1	ILMN_3162771	005220687	I	910	CAAGACCCCAGCCTCGCCCTTTTGCTCATCTGCAGAGCAAGGTCATGAAG	9	+	15116356-15116405	9qA2	Mus musculus TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D (Taf1d), transcript variant 2, mRNA.				4930553M18Rik; MGC117821; 5930426I11Rik; 2810003M17Rik	4930553M18Rik; MGC117821; 5930426I11Rik; 2810003M17Rik
Mus musculus	RefSeq	ILMN_217349	ILMN_217349	SEPP1	NM_009155.3	NM_009155.3		20363	110735409	NM_009155.3	Sepp1	NP_033181.3	ILMN_3141048	007160603	A	1137	GCTGCCTGACAAAATCAGCCCATGAACCCCATGGAAGCCAACCCCAACTG	15	+	3229615-3229664	15qA1	Mus musculus selenoprotein P, plasma, 1 (Sepp1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving the nonmetallic element selenium or compounds that contain selenium, such as selenocysteine [goid 1887] [evidence IDA]; The chemical reactions and pathways involving the nonmetallic element selenium or compounds that contain selenium, such as selenocysteine [goid 1887] [evidence IMP]	Interacting selectively with selenium (Se) [goid 8430] [evidence IDA]	Se-P; AU018766; D15Ucla1; selp	Se-P; AU018766; D15Ucla1; selp
Mus musculus	MEEBO	ILMN_193594	ILMN_193594	D4ERTD681E	scl25266.1.1_10						D4Ertd681e		ILMN_1217817	004280121	S	11	GACATACGTTAAGGTCTACTCTAAGGCTCTTCACTTGGTCCTAGATCTTG										
Mus musculus	MEEBO	ILMN_221177	ILMN_221177	SUI1-RS1	scl020918.4_11				22165346	NM_011508	Sui1-rs1		ILMN_2731940	003120072	S	576	CACAGCTTGTATAATGTAATCATTTGGGGTCCGCTTTTAACTTGGACTAG										
Mus musculus	RefSeq	ILMN_210858	ILMN_210858	DRD2	NM_010077.1	NM_010077.1		13489	6753679	NM_010077.1	Drd2	NP_034207.1	ILMN_2988228	004850301	S	2258	GCCTGGGAAGTTGAGCCTTGGACCAGTGTTGGAGCTGAAGTTGGAGGTGG	9	+	49215993-49216042	9qA5.3	Mus musculus dopamine receptor 2 (Drd2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant [goid 42220] [evidence IMP]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant [goid 42220] [evidence IMP]; Behavior in a fully developed and mature organism [goid 30534] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; The process of renal water excretion [goid 30146] [evidence IMP]; The process of renal sodium excretion [goid 30147] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IGI]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IGI]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; Behavior associated with the intake of food [goid 7631] [evidence IGI]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IGI]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IMP]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence IMP]; The migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex [goid 21853] [evidence IMP]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence IMP]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence ISO]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IGI]; Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32228] [evidence IGI]; Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32228] [evidence IMP]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of dopamine receptor protein signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 60160] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IGI]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IMP]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IMP]; Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32228] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence IMP]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours [goid 32922] [evidence IMP]; Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60124] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IMP]; A change in the behavior of an organism as a result of an ethanol stimulus [goid 48149] [evidence IMP]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; The regulation of blood pressure mediated by detection of stimuli and a neurological response [goid 1976] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43266] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [evidence IMP]; A change in the behavior of an organism as a result of an ethanol stimulus [goid 48149] [evidence IMP]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]; Any process that modulates the frequency, rate or extent of the directed movement of the catecholamine neurotransmitter dopamine into a cell [goid 51584] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of dopamine into a cell [goid 51586] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of dopamine receptor protein signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 60160] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence IMP]; The process by which the anatomical structures of branches in a nerve are generated and organized. Morphogenesis pertains to the creation of form. This term refers to an anatomical structure (nerve) not a cell (neuron) [goid 48755] [evidence IMP]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IDA]	Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence IEA]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D2 receptors [goid 1670] [evidence IDA]; Combining with the neurotransmitter dopamine and activating adenylate cyclase via coupling to Gi/Go to initiate a change in cell activity [goid 1591] [evidence IDA]; Combining with the neurotransmitter dopamine and activating adenylate cyclase via coupling to Gi/Go to initiate a change in cell activity [goid 1591] [evidence IMP]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D2 receptors [goid 1670] [evidence IMP]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D2 receptors [goid 1670] [evidence IDA]; Interacting selectively with dopamine, a catecholamine neurotransmitter formed by aromatic-L-amino-acid decarboxylase from 3,4-dihydroxy-L-phenylalanine [goid 35240] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IDA]	Drd-2; D2R	Drd-2; D2R
Mus musculus	RefSeq	ILMN_219406	ILMN_219406	NAT6	NM_019750.2	NM_019750.2		56441	31560382	NM_019750.2	Nat6	NP_062724.1	ILMN_2905859	004920754	S	1884	AGGCCATACTTCAGCCCCCACAACCCCCTGTGGACAACCTTACCCTGTGT	9	+	107442033-107442082	9qF1	Mus musculus N-acetyltransferase 6 (Nat6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	fusion 2; Fus2; AI225910; Fus 2	fusion 2; Fus2; AI225910; Fus 2
Mus musculus	RefSeq	ILMN_199162	ILMN_245345	SLFN14	XM_894124.3	XM_894124.3		237890	149261968	XM_894124.3	Slfn14	XP_899217.2	ILMN_1236661	002810017	S	2590	TGCTAAAAGCAATGGCCCGTGGGACAACGGAGGTCGCCTTCAACAGCGCT	11	-	83089672-83089721	11qC	PREDICTED: Mus musculus schlafen family member 14 (Slfn14), mRNA.					
Mus musculus	RefSeq	ILMN_212323	ILMN_212323	TESSP2	NM_153099.1	NM_153099.1		235628	23346526	NM_153099.1	Tessp2	NP_694739.1	ILMN_2878791	001010307	S	1135	GTCGGGGATCTGAGAGACTTGAAAGTGTTCTGCCTGGTGCTCTGGTCACC	9	+	110705828-110705877	9qF3	Mus musculus testis serine protease 2 (Tessp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190884	ILMN_260495	RAB43	NM_001039394.1	NM_001039394.1		69834	86476068	NM_001039394.1	Rab43	NP_001034483.1	ILMN_1250910	004210307	S	4524	CATGAAAAGTTGCCTTCCTGGATATGTCAGAGACAGTGTACAATTCAACC	6	-	87738878-87738927	6qD1	Mus musculus RAB43, member RAS oncogene family (Rab43), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW490415; 1810048P08Rik; MGC6993; 2500004H21Rik	AW490415; 1810048P08Rik; MGC6993; 2500004H21Rik
Mus musculus	RefSeq	ILMN_221923	ILMN_260495	RAB43	NM_001039394.1	NM_001039394.1		69834	86476068	NM_001039394.1	Rab43	NP_001034483.1	ILMN_1229477	004640193	S	910	TTCAGAGTCAGCCCTCCCGGGCACTGGCTTCTCTAGAGGGATTCTGCACC	6	-	87742492-87742541	6qD1	Mus musculus RAB43, member RAS oncogene family (Rab43), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW490415; 1810048P08Rik; MGC6993; 2500004H21Rik	AW490415; 1810048P08Rik; MGC6993; 2500004H21Rik
Mus musculus	RefSeq	ILMN_218704	ILMN_218704	SPRR1B	NM_009265.3	NM_009265.3		20754	141801970	NM_009265.3	Sprr1b	NP_033291.1	ILMN_2699139	006450228	S	525	GCCCAAAAGCTGTGCCTTGGGGAGATGATCAACAATAGATGCTGAGCCTC	3	-	92240976-92241025	3qF1	Mus musculus small proline-rich protein 1B (Sprr1b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence TAS]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]		
Mus musculus	RefSeq	ILMN_219675	ILMN_232852	CADPS	NM_001042617.1	NM_001042617.1		27062	110825965	NM_001042617.1	Cadps	NP_001036082.1	ILMN_1258636	002650010	S	5284	CTGTCATGTACATTGCACTTTGATCTGTAACTGAGCGACCCTGGGGTCTG	14	-	13205203-13205252	14qA1	Mus musculus Ca2+-dependent secretion activator (Cadps), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The regulated release of catecholamines by a cell or group of cells. The catecholamines are a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 50432] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [evidence IMP]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA1121; AU067781; CAPS; CAPS1; MGC90712	mKIAA1121; AU067781; CAPS; CAPS1; MGC90712
Mus musculus	RefSeq	ILMN_209701	ILMN_209701	PPAP2A	NM_008903.1	NM_008903.1		19012	6679430	NM_008903.1	Ppap2a	NP_032929.1	ILMN_1222991	001010097	S	427	CCCTTACAAGGAAGACACCATACCTTATGCCTTATTAGGTGGAATAGTCA	13	+	113641693-113641742	13qD2.2	Mus musculus phosphatidic acid phosphatase 2a (Ppap2a), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The chemical reactions and pathways resulting in the formation of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 6651] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence TAS]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [evidence TAS]; The chemical reactions and pathways involving sphingosine (sphing-4-enine), trans-D-erytho-2-amino-octadec-4-ene-1,3-diol, a long chain amino diol sphingoid base that occurs in most sphingolipids in animal tissues [goid 6670] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IDA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence TAS]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	LPP-1; Hic53; LPP1; Hpic53; mPAP	LPP-1; Hic53; LPP1; Hpic53; mPAP
Mus musculus	Riken	ILMN_203072	ILMN_203072	C330020F18RIK	ri|C330020F18|PX00076I10|AK049297|1744					AK049297	C330020F18Rik		ILMN_1244203	005560201	S	1392	GCCCAGACCTGCTTTCAGGCTCTTAGCTGCCTCTGGAAATGCTACACAAG										
Mus musculus	RefSeq	ILMN_230504	ILMN_230504	1700040I03RIK	NM_028505.1	NM_028505.1		73327	117606406	NM_028505.1	1700040I03Rik	NP_082781.1	ILMN_2881024	006660343	S	285	GGCCTGCGGGGAACTCAGCAACGGCTTCTTTATCCAGGACCAGATCGCTC	6	-	85398523-85398572	6qC3	Mus musculus RIKEN cDNA 1700040I03 gene (1700040I03Rik), mRNA. XM_923066 XM_978905 XM_981332 XM_981367 XM_981402 XM_990015 XM_991725	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200799	ILMN_200799	LOC384577	XM_357720.1	XM_357720.1			38086240	XM_357720.1	LOC384577		ILMN_2540050	006960221	S	207	CGAAGGAGAGGCCAGAGGCAAAAAGAAGAAACCACCTTCCGCAGCTCCTG										
Mus musculus	MEEBO	ILMN_195926	ILMN_195926	5330401P04RIK	scl17978.10_263				27369933	NM_172654	5330401P04Rik		ILMN_2520011	006480711	S	20	TAACAGGTCAGGTGTGTCAGTACTTGGGCATTGCCATGTTCACCTCTCAC										
Mus musculus	RefSeq	ILMN_198277	ILMN_198277	LOC381143	XM_355060.1	XM_355060.1			38083588	XM_355060.1	LOC381143		ILMN_1241816	002680524	S	238	TGAATTCATCGGGCACAGGCTTGACTGCACATGTGAAGAGTTCTGCCCTG										
Mus musculus	RefSeq	ILMN_219209	ILMN_219209	CHAF1A	NM_013733.3	NM_013733.3		27221	142376418	NM_013733.3	Chaf1a	NP_038761.1	ILMN_1257667	002030068	S	2867	CCTAGGTGACAGGGAGTAGTGGAGTGTAGGCACCTGAAGTGCAAGGTTGG	17	+	56207008-56207057	17qD	Mus musculus chromatin assembly factor 1, subunit A (p150) (Chaf1a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AL024058; AL023013; CAF-1; Cac1p	AL024058; AL023013; CAF-1; Cac1p
Mus musculus	RefSeq	ILMN_196676	ILMN_196676	C130002K18RIK	XM_358371.1	XM_358371.1			38087127	XM_358371.1	C130002K18Rik		ILMN_1217705	003780079	S	3547	AGGGACTCAGCTGTGAACTGTGGTGGTGCACATCTGTAAAGACAGCCTGG										
Mus musculus	RefSeq	ILMN_218131	ILMN_248640	4930515G13RIK	XM_979393.2	XM_979393.2		75098	149268613	XM_979393.2	4930515G13Rik	XP_984487.1	ILMN_2692007	006060047	S	1081	TCATAATAATATCCATTCTACCTGACTGCTTCATTGAATATATCTTTTTG	17	-	21937677-21937726	17qA3.3	PREDICTED: Mus musculus RIKEN cDNA 4930515G13 gene (4930515G13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_210028	ILMN_210028	CCND1	NM_007631.2	NM_007631.2		12443	119672895	NM_007631.2	Ccnd1	NP_031657.1	ILMN_2669793	000020364	S	2463	AACGCACACCTCTGCCCTGCTGGAGAAGGTTTAGGGCCATGTCTGAGAGA	7	-	152117119-152117168	7qF5	Mus musculus cyclin D1 (Ccnd1), mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The resumption of the mitotic cell division cycle by cells that were in a quiescent or other non-dividing state [goid 320] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IDA]	AI327039; PRAD1; bcl-1; Cyl-1	AI327039; PRAD1; bcl-1; Cyl-1
Mus musculus	RefSeq	ILMN_213762	ILMN_213762	OLFR827	NM_146300.1	NM_146300.1		258297	22129684	NM_146300.1	Olfr827	NP_666412.1	ILMN_1230944	003830156	S	624	GATGGTGTCACTTAGTCTGGCTGTGCTTATTATTTTGCCAACAATAATAG	10	-	129647511-129647560	10qD3	Mus musculus olfactory receptor 827 (Olfr827), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR210-5	MOR210-5
Mus musculus	RefSeq	ILMN_200205	ILMN_200205	LOC385938	XM_359006.1	XM_359006.1			38080902	XM_359006.1	LOC385938		ILMN_1235990	003390403	S	6	CATAGCCATTCATTGGACAGAGCACAGGATCCCCAATGAAGGAGTTAGAG										
Mus musculus	RefSeq	ILMN_214832	ILMN_251804	MYL9	XM_977718.2	XM_977718.2		98932	149250365	XM_977718.2	Myl9	XP_982812.2	ILMN_2718662	000050148	S	264	GTACCGCGAGGCACCCATTGATAAGAAGGGCAACTTCAACTACGTGGAGT				2qH1	PREDICTED: Mus musculus myosin, light polypeptide 9, regulatory (Myl9), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]		
Mus musculus	Riken	ILMN_207226	ILMN_207226	PPS	ri|D730034H23|PX00673P12|AK085743|2076					AK085743	Pps		ILMN_1248392	005360520	S	1841	GTCTCTGTGCCAAAGCCCAGCGGCCTGAACCTGCTGTGTTAGTTAGGATT										
Mus musculus	RefSeq	ILMN_195299	ILMN_229325	EGR3	NM_018781.2	NM_018781.2		13655	118130757	NM_018781.2	Egr3	NP_061251.1	ILMN_2653543	000050397	S	1070	AGCAAAAGGAGAAGAAGTCGGAGAAAGGGGGTGCGCCCTCTGCATCCTCG	14	+	70479618-70479667	14qD2	Mus musculus early growth response 3 (Egr3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC124009; MGC124006; Pilot	MGC124009; MGC124006; Pilot
Mus musculus	RefSeq	ILMN_197570	ILMN_197570	LOC380929	XM_354837.1	XM_354837.1			38076628	XM_354837.1	LOC380929		ILMN_2528594	004200661	S	634	CGCCTGGAGCGAGGAGGACGACTACACCTGGTTATATGTTGGCTCTTCAA										
Mus musculus	RefSeq	ILMN_255302	ILMN_255302	KCNH4	NM_001081194.1	NM_001081194.1		380728	124487120	NM_001081194.1	Kcnh4	NP_001074663.1	ILMN_3156554	005690678	A	2154	AGACAAGACTCTGCCATCCATCACAGAAACCGAGGGTGGCACGGAGCCTG	11	-	100607202-100607251	11qD	Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 4 (Kcnh4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Kcnh4	Kcnh4
Mus musculus	RefSeq	ILMN_187946	ILMN_229630	DEF8	NM_054046.4	NM_054046.4		23854	146149306	NM_054046.4	Def8	NP_473387.1	ILMN_2680662	001690278	S	3234	GCAGATCTGGTAGAAACATGCTATGAGTCCACGGGTGGGTATGAAGAGTC				8qE1	Mus musculus differentially expressed in FDCP 8 (Def8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D8Ertd713e; AI449518	D8Ertd713e; AI449518
Mus musculus	RefSeq	ILMN_211543	ILMN_211543	CCL28	NM_020279.3	NM_020279.3		56838	142373007	NM_020279.3	Ccl28	NP_064675.1	ILMN_1218590	004610079	S	488	GGCCCATATCTGGTTATAAATTTCTCAGCTGAATCTTCCTTATTGACACC	13|NT_166323.1	-	152298-152347		Mus musculus chemokine (C-C motif) ligand 28 (Ccl28), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence ISS]	MEC; CCK1; Scya28	MEC; CCK1; Scya28
Mus musculus	Riken	ILMN_203758	ILMN_203758	A130026C10RIK	ri|A130026C10|PX00121P09|AK037550|2970					AK037550	A130026C10Rik		ILMN_1243621	002630040	S	2748	AGGGAAATCTCACACCCTTCCTTGGCTTCCACAGGTTCTGCATCCCCAGG										
Mus musculus	RefSeq	ILMN_192734	ILMN_192734	TRIM13	NM_023233.2	NM_023233.2		66597	142348908	NM_023233.2	Trim13	NP_075722.1	ILMN_2490821	004150711	S	1204	GTCTGCTGATTTTATAGAACAATCTGTTTTTTACTGGGAACAGATGACAG	14	+	62224468-62224517	14qD1	Mus musculus tripartite motif-containing 13 (Trim13), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RNF77; CAR; LEU5; 3110001L12Rik; Rfp2	RNF77; CAR; LEU5; 3110001L12Rik; Rfp2
Mus musculus	RefSeq	ILMN_213293	ILMN_226601	DIP2C	NM_001081426.1	NM_001081426.1		208440	124487472	NM_001081426.1	Dip2c	NP_001074895.1	ILMN_1254384	002190348	S	7483	GGACTCGGTTGGAAGCTTAGTTGTGCAAGAAAAAGGGAAGAAGACACTTA	13	+	9667629-9667678	13qA1	Mus musculus DIP2 disco-interacting protein 2 homolog C (Drosophila) (Dip2c), mRNA.			Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	9630044M06; mKIAA0934; 2900024P20Rik; KIAA0934	9630044M06; mKIAA0934; 2900024P20Rik; KIAA0934
Mus musculus	RefSeq	ILMN_213293	ILMN_226601	DIP2C	NM_001081426.1	NM_001081426.1		208440	124487472	NM_001081426.1	Dip2c	NP_001074895.1	ILMN_1255897	002760687	S	5633	CACCCTTCTAGGAGAGTTTATTGAGGTACGAGAACCTTCCAGGTAGCACC	13	+	9665779-9665828	13qA1	Mus musculus DIP2 disco-interacting protein 2 homolog C (Drosophila) (Dip2c), mRNA.			Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	9630044M06; mKIAA0934; 2900024P20Rik; KIAA0934	9630044M06; mKIAA0934; 2900024P20Rik; KIAA0934
Mus musculus	RefSeq	ILMN_201334	ILMN_201334	LOC382465	XM_356521.1	XM_356521.1			38091015	XM_356521.1	LOC382465		ILMN_2541930	000770497	S	431	ATGACTTGGTGCTGGGGGCGGATATCGTGTACCTGGAACCTACCTTCCCG										
Mus musculus	RefSeq	ILMN_184554	ILMN_184554	WDR19	NM_153391.2	NM_153391.2		213081	154240687	NM_153391.2	Wdr19	NP_700440.2	ILMN_2419604	007000142	S	4303	TGTACTATTAATAGTATATGATTGTAAATACTAAGTTTTTTAAATAACTT				5qC3.1	Mus musculus WD repeat domain 19 (Wdr19), mRNA.		The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PWDMP; mKIAA1638; D330023L08Rik; C330027H04Rik	PWDMP; mKIAA1638; D330023L08Rik; C330027H04Rik
Mus musculus	MEEBO	ILMN_193398	ILMN_193398	ADAMTS6	scl44437.25_103						Adamts6		ILMN_1251521	002030112	S	1	GGAGCACGGCCTTCCATGGGGAAACAAAGCGTGGTTTAACAGGATTCAAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_213817	ILMN_213817	MDK	NM_010784.4	NM_010784.4		17242	59894793	NM_010784.4	Mdk	NP_034914.1	ILMN_1254450	001980138	S	964	TCCCCATACCCTCTTTTGTTCTCCCCACCCTGATACTTGTTATTAAGAAA	2	-	91770010-91770059	2qE1	Mus musculus midkine (Mdk), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	MK; Mek	MK; Mek
Mus musculus	Riken	ILMN_204206	ILMN_204206	9530049G18RIK	ri|9530049G18|PX00113M03|AK035443|1609					AK035443	9530049G18Rik		ILMN_1247803	000150634	S	1338	CTGTGTAGCAGGGCCTGGTGAGATGCTTGTTGTACACACCCAGTGACCTG										
Mus musculus	MEEBO	ILMN_210809	ILMN_210809	LOC380799	IGHV5S19_AF120461_Ig_heavy_variable_5S19_186	XM_354711.1			38073788	XM_354711.1	LOC380799		ILMN_2609403	002750113	S	298	AGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACAACCTGTACCTG										
Mus musculus	RefSeq	ILMN_225528	ILMN_225528	TRPV5	NM_001007572.2	NM_001007572.2		194352	111186473	NM_001007572.2	Trpv5	NP_001007573.1	ILMN_2826770	004780519	S	2268	CCCAAGTAGGCCAAGGTGTGAGAAAGGGGGTTGGGGGTAGTTGAAGGTGG	6	-	41615807-41615856	6qB2.1	Mus musculus transient receptor potential cation channel, subfamily V, member 5 (Trpv5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence NAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]	MGC129346; MGC129347; ECAC1; D630033B11; CAT2	MGC129346; MGC129347; ECAC1; D630033B11; CAT2
Mus musculus	RefSeq	ILMN_195491	ILMN_225528	TRPV5	NM_001007572.2	NM_001007572.2		194352	111186473	NM_001007572.2	Trpv5	NP_001007573.1	ILMN_1230989	004570128	S	1917	GGCCTGGGAGACCGTTGGTTCTTACGGGTTGAACACCACCAGGAGCAGAA	6	-	41619523-41619572	6qB2.1	Mus musculus transient receptor potential cation channel, subfamily V, member 5 (Trpv5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence NAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]	MGC129346; MGC129347; ECAC1; D630033B11; CAT2	MGC129346; MGC129347; ECAC1; D630033B11; CAT2
Mus musculus	RefSeq	ILMN_200851	ILMN_243077	LOC547182	XM_907988.1	XM_907988.1		547182	83002855	XM_907988.1	LOC547182	XP_913081.1	ILMN_1250739	001430026	S	262	TACATGGGCCCGGACAACTCCAGTGTGGACTACCGCCTCAGCCTGGTGTA					PREDICTED: Mus musculus similar to leukocyte receptor cluster (LRC) member 8 (LOC547182), mRNA.					
Mus musculus	MEEBO	ILMN_209736	ILMN_209736	PTBP1	scl0019205.2_0	NM_008956.1			6679514	NM_008956.1	Ptbp1		ILMN_1227001	006590753	S	2683	CCCTGAGCCCTTCATTCTGAGCTGTAGCGAGCTGGGCCTGGATTCAATAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	Riken	ILMN_204314	ILMN_204314	MYNN	ri|5830450I21|PX00040I05|AK030898|2566					AK030898	Mynn		ILMN_1213772	005090240	S	1333	GCTCTCTTATCACTCATTCTCGGAAACACACAGGAGAACGACCATTTATC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190356	ILMN_235254	CDC42EP2	NM_026772.1	NM_026772.1		104252	22779863	NM_026772.1	Cdc42ep2	NP_081048.1	ILMN_1239294	003780338	S	1286	CCCCTCCTTTGTTGGTATCGTTGGCTATGCTCCCCACTGGTCTTTGTGTT	19	-	5917669-5917718	19qA	Mus musculus CDC42 effector protein (Rho GTPase binding) 2 (Cdc42ep2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]	Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect [goid 1515] [evidence IPI]	Cep2; 1110008C05Rik; AI845703; D19Bwg1013e; Borg1	Cep2; 1110008C05Rik; AI845703; D19Bwg1013e; Borg1
Mus musculus	Riken	ILMN_204429	ILMN_204429	SEPT7	ri|A530023M17|PX00140B11|AK040766|2258					AK040766	Sept7		ILMN_1256840	004200689	S	1908	GAATGCAGCTGGCAGCAGAAAGGGCACCAGAGTAATCTTACGTTCCTACA						Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	Riken	ILMN_204737	ILMN_204737	INPP5E	ri|B930041N04|PX00163P24|AK047245|3049					AK047245	Inpp5e		ILMN_1217560	003450110	S	2031	CAGCTCACCCGGGAGATGAAGAAAGGTGAGTGGCCTGAGGAGCAGCACCT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IDA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IDA]		
Mus musculus	Riken	ILMN_202059	ILMN_202059	2610103J23RIK	ri|2610103J23|ZX00061G09|AK011808|2080					AK011808	2610103J23Rik		ILMN_2546676	006940482	S	1971	AGAGAATGTTGTTGCTGCTTTTCCTTGTGTGTGTTGCTTTCCCCAAATCC										
Mus musculus	RefSeq	ILMN_218698	ILMN_218698	0610009D07RIK	NM_025323.2	NM_025323.2		66055	31981274	NM_025323.2	0610009D07Rik	NP_079599.1	ILMN_2699078	006290215	S	608	TTAATTAGTACTGAATATTGTGATTTCTTATTTGAGAACTAGAATGACTT	12	+	4833957-4834006	12qA1.1	Mus musculus RIKEN cDNA 0610009D07 gene (0610009D07Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	6030419K15Rik; AV001342; Sf3b14	6030419K15Rik; AV001342; Sf3b14
Mus musculus	RefSeq	ILMN_218698	ILMN_218698	0610009D07RIK	NM_025323.2	NM_025323.2		66055	31981274	NM_025323.2	0610009D07Rik	NP_079599.1	ILMN_2952292	003060092	S	1065	CTTGCCTTGGTCATGATGTCTGCTCACAGCCTTAAAACCCTTAAAACACT	12	+	4834414-4834463	12qA1.1	Mus musculus RIKEN cDNA 0610009D07 gene (0610009D07Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	6030419K15Rik; AV001342; Sf3b14	6030419K15Rik; AV001342; Sf3b14
Mus musculus	RefSeq	ILMN_189136	ILMN_189136	ZBTB24	NM_153398.2	NM_153398.2		268294	31542229	NM_153398.2	Zbtb24	NP_700447.2	ILMN_1234461	003140608	S	2528	GGGTAGAGAGGGTCCATCCTGGTACTTCTCTTAGGCGTAACTTTTGCCCC	10	+	41185077-41185126	10qB1	Mus musculus zinc finger and BTB domain containing 24 (Zbtb24), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Bif1; ZNF450; Bsg1; BC055367	Bif1; ZNF450; Bsg1; BC055367
Mus musculus	RefSeq	ILMN_261828	ILMN_261828	OLFR832	NM_001011824.1	NM_001011824.1		258075	58801411	NM_001011824.1	Olfr832	NP_001011824.1	ILMN_3161842	003890221	S	465	TGCACTGCTCCACACTTTGATGGCACTGCGTCTGTCATTCTGCACAAAGT	9	+	18749558-18749607	9qA2	Mus musculus olfactory receptor 832 (Olfr832), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR153-1	MOR153-1
Mus musculus	RefSeq	ILMN_197483	ILMN_260126	SLC10A5	NM_001010834.2	NM_001010834.2		241877	84579886	NM_001010834.2	Slc10a5	NP_001010834.1	ILMN_1249970	006060437	S	1195	GGCCATCATTCAGCTTTCCTTTTCCCAGCCCAAGGCACACGAAGCCTCCG	3	-	10334412-10334461	3qA1	Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 5 (Slc10a5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	mP5; Gm405	mP5; Gm405
Mus musculus	RefSeq	ILMN_223773	ILMN_223773	ZFP688	NM_026999.2	NM_026999.2		69234	141802604	NM_026999.2	Zfp688	NP_081275.1	ILMN_1244649	000650044	S	846	ACGTCATGTGTGTGTGGACTGTGGACGCCGGTTTACCTATCCATCTTTGC	7	-	134562878-134562927	7qF3	Mus musculus zinc finger protein 688 (Zfp688), mRNA.				AI326029; MGC41678; 2810407K09Rik	AI326029; MGC41678; 2810407K09Rik
Mus musculus	MEEBO	ILMN_224277	ILMN_224277	CTSE	scl013034.10_9				31982440	NM_007799	Ctse		ILMN_1228235	005290546	S	1730	CCTCTACCATCACCACGATGAAAGAAGTTCTGTCTATAGTCTTCACTGCT						The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]		
Mus musculus	RefSeq	ILMN_197023	ILMN_197023	LOC381307	XM_358549.1	XM_358549.1			38073552	XM_358549.1	LOC381307		ILMN_2526631	000870097	S	81	TCTACAGTATAGGCCAATTTCTCGGCTCCTGGCCTGCGCGCCCGTGTGCC										
Mus musculus	Riken	ILMN_205457	ILMN_205457	A030007I19RIK	ri|A030007I19|PX00063D07|AK037186|2477					AK037186	A030007I19Rik		ILMN_1250573	002230338	S	1788	CTGGTCTGAAGAGAAAACTAACCCCCAAATTTCATGGGTCACCAGACTGC										
Mus musculus	RefSeq	ILMN_192607	ILMN_192607	UPK3A	NM_023478.1	NM_023478.1		22270	12963692	NM_023478.1	Upk3a	NP_075967.1	ILMN_2805051	000630097	S	719	CTGATGGGGAAATGACACACGACTCACAGATCACCCAGGAGGCTGTCCCC	15	+	84852682-84852731	15qE2	Mus musculus uroplakin 3A (Upk3a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence IMP]; The directed movement into, out of or within the cell of urea, the water-soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle [goid 15840] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The process whose specific outcome is the progression of the urinary bladder over time, from its formation to the mature structure. The urinary bladder is an elastic, muscular sac situated in the anterior part of the pelvic cavity in which urine collects before excretion [goid 60157] [evidence IMP]; The regulation of the levels, transport, and metabolism of potassium ions [goid 55075] [evidence IMP]; The regulation of the levels, transport, and metabolism of sodium ions [goid 55078] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]		MGC159041; 1110017C07Rik; UPIII; MGC159039; Upk3	MGC159041; 1110017C07Rik; UPIII; MGC159039; Upk3
Mus musculus	RefSeq	ILMN_186664	ILMN_330747	LOC100047053	XM_001477291.1	XM_001477291.1		100047053	149255608	XM_001477291.1	LOC100047053	XP_001477341.1	ILMN_2437448	005700347	S	271	GGGCAGTCTCCTAAACTGCTGATATACTATGCATCCAATCGCTACACTGG					PREDICTED: Mus musculus similar to monoclonal antibody kappa light chain (LOC100047053), mRNA.					
Mus musculus	RefSeq	ILMN_193779	ILMN_330747	LOC100047053	XM_001477291.1	XM_001477291.1		100047053	149255608	XM_001477291.1	LOC100047053	XP_001477341.1	ILMN_1249314	006180747	S	254	GGTACCAACAGAAGCCAGGGCAGTCTCCTAAACTGCTGATATACTATGCA					PREDICTED: Mus musculus similar to monoclonal antibody kappa light chain (LOC100047053), mRNA.					
Mus musculus	RefSeq	ILMN_216049	ILMN_216049	GPSM2	NM_029522.1	NM_029522.1		76123	22758137	NM_029522.1	Gpsm2	NP_083798.1	ILMN_2882241	000430630	S	2953	CTGTTAGGAAAACTACATAGGCAGAAAACTCACAGAAAGTACGCAAGGCT	3	-	108481885-108481934	3qF3	Mus musculus G-protein signalling modulator 2 (AGS3-like, C. elegans) (Gpsm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	6230410J09Rik; Pins	6230410J09Rik; Pins
Mus musculus	RefSeq	ILMN_216049	ILMN_216049	GPSM2	NM_029522.1	NM_029522.1		76123	22758137	NM_029522.1	Gpsm2	NP_083798.1	ILMN_2882235	005670152	S	3017	CCATGAGCCTTCATCTAACGAGTTTACGAGACAGTGATCTTCTGGCCCGC	3	-	108481821-108481870	3qF3	Mus musculus G-protein signalling modulator 2 (AGS3-like, C. elegans) (Gpsm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	6230410J09Rik; Pins	6230410J09Rik; Pins
Mus musculus	RefSeq	ILMN_215414	ILMN_215414	PRPF40B	NM_018786.2	NM_018786.2		54614	142379827	NM_018786.2	Prpf40b	NP_061256.1	ILMN_2659200	000830563	S	2164	GCCGAAAGCATGGCAGAAAGGGCAAGAAACACCATCGCAAGCGTTCACAC	15	+	99145942-99145991	15qF1	Mus musculus PRP40 pre-mRNA processing factor 40 homolog B (yeast) (Prpf40b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2610317D23Rik; MGC91243; Hypc	2610317D23Rik; MGC91243; Hypc
Mus musculus	MEEBO	ILMN_192761	ILMN_192761	A830041P22RIK	scl9672.1.1_230				31342811	NM_177102	A830041P22Rik		ILMN_2491090	000650575	S	18	ATGTTTCACAATATGAGGAAGGAATATGACATAAAAATGACTTTACTACA										
Mus musculus	RefSeq	ILMN_215331	ILMN_215331	SCGB3A1	NM_170727.1	NM_170727.1		68662	25014111	NM_170727.1	Scgb3a1	NP_733923.1	ILMN_2658200	004810017	S	109	CACCCACTAGTCTGATGACATCTTCAAGGGCCAGCCCTGGATTGATGCCA	11	+	49477523-49477572	11qB1.2	Mus musculus secretoglobin, family 3A, member 1 (Scgb3a1), transcript variant B, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	UGRP2A; Pnsp2; 1110030K16Rik; MGC107611; LuLeu2; Utgrp2; HIN-1; UGRP2	UGRP2A; Pnsp2; 1110030K16Rik; MGC107611; LuLeu2; Utgrp2; HIN-1; UGRP2
Mus musculus	RefSeq	ILMN_213541	ILMN_215331	SCGB3A1	NM_170727.1	NM_170727.1		68662	25014111	NM_170727.1	Scgb3a1	NP_733923.1	ILMN_2638082	003290184	S	499	GAGATGCCTGACGAGATATTTTTCTTTAACAAGAGCTGGAAACCCTGCTG	11	+	49478521-49478570	11qB1.2	Mus musculus secretoglobin, family 3A, member 1 (Scgb3a1), transcript variant B, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	UGRP2A; Pnsp2; 1110030K16Rik; MGC107611; LuLeu2; Utgrp2; HIN-1; UGRP2	UGRP2A; Pnsp2; 1110030K16Rik; MGC107611; LuLeu2; Utgrp2; HIN-1; UGRP2
Mus musculus	RefSeq	ILMN_213971	ILMN_213971	HOXB5	NM_008268.1	NM_008268.1		15413	6680250	NM_008268.1	Hoxb5	NP_032294.1	ILMN_1242977	005130136	S	1777	AGTGAGCGGGTGGATGCTGTGCTACGTGTGAAATCTGTCTTTGCCAGGCC	11	+	96167316-96167365	11qD	Mus musculus homeo box B5 (Hoxb5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 45446] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-2.1; AI385717	Hox-2.1; AI385717
Mus musculus	MEEBO	ILMN_188506	ILMN_188506	COL2A1	scl012824.1_9				13624304	NM_031163	Col2a1		ILMN_2759144	007380164	S	4156	ACACTGCCCTGAAGGATGGCTGCACGAAACACACTGGTAAGTGGGGCAAG						A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IDA]; A collagen homotrimer of alpha1(II) chains; type II collagen triple helices associate to form fibrils [goid 5585] [evidence IMP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; A homeostatic process involved in the maintenance of an internal equilibrium within a defined tissue of an organism, including control of cellular proliferation and death and control of metabolic function [goid 1894] [evidence IMP]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with platelet-derived growth factor [goid 48407] [evidence ISO]		
Mus musculus	Riken	ILMN_202152	ILMN_202152	3100003M19RIK	ri|3100003M19|ZX00070G19|AK013928|1990					AK013928	3100003M19Rik		ILMN_1239955	007200722	S	1384	GGCACACACCTACATCTCAGCACTCAGCAGTGGCAGGAGACCAATCAGCT										
Mus musculus	RefSeq	ILMN_216892	ILMN_216892	DENR	NM_026603.1	NM_026603.1		68184	13386091	NM_026603.1	Denr	NP_080879.1	ILMN_2804330	002350139	S	1857	GCTGGGCAGAAGTGCTTACCTACCATGCTTGTAGCGTCACAAACACAAGT	5	+	124189071-124189120	5qF	Mus musculus density-regulated protein (Denr), mRNA.		The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	1500003K04Rik	1500003K04Rik
Mus musculus	RefSeq	ILMN_197498	ILMN_197498	LOC380902	XM_354815.1	XM_354815.1			38076299	XM_354815.1	LOC380902		ILMN_1217371	006060743	S	938	AAAAAGAGGAAGAAGCTACCTAAAAAAGGCCGGAAGAAGAAAGGTCAGTG										
Mus musculus	RefSeq	ILMN_212056	ILMN_234634	EPHB2	NM_010142.2	NM_010142.2		13844	118129939	NM_010142.2	Ephb2	NP_034272.1	ILMN_1220911	004560463	S	2895	CAAGGAGAGCTTTGCCAACGCCGGCTTTACCTCTTTCGACGTTGTATCTC	4	-	136211840-136211889	4qD3	Mus musculus Eph receptor B2 (Ephb2), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IDA]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; A process that increases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48170] [evidence IMP]; Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA];  [goid 8046] [evidence IDA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IDA];  [goid 5005] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	Prkm5; Hek5; Drt; Qek5; Sek3; Tyro5; ETECK; Cek5; Erk; Nuk	Prkm5; Hek5; Drt; Qek5; Sek3; Tyro5; ETECK; Cek5; Erk; Nuk
Mus musculus	RefSeq	ILMN_212056	ILMN_234634	EPHB2	NM_010142.2	NM_010142.2		13844	118129939	NM_010142.2	Ephb2	NP_034272.1	ILMN_2688515	005560307	S	4066	CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGA	4	-	136210187-136210236	4qD3	Mus musculus Eph receptor B2 (Ephb2), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IDA]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; A process that increases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48170] [evidence IMP]; Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA];  [goid 8046] [evidence IDA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IDA];  [goid 5005] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	Prkm5; Hek5; Drt; Qek5; Sek3; Tyro5; ETECK; Cek5; Erk; Nuk	Prkm5; Hek5; Drt; Qek5; Sek3; Tyro5; ETECK; Cek5; Erk; Nuk
Mus musculus	RefSeq	ILMN_192197	ILMN_255161	SUPT6H	NM_009297.1	NM_009297.1		20926	6678182	NM_009297.1	Supt6h	NP_033323.1	ILMN_1242264	007160554	S	5861	CCCTCATCACCTAACCTCACCTGCTTCTCGCCTGTCATTTGAATAAACAG	11	-	78035966-78035968:78035850-78035896	11qB5	Mus musculus suppressor of Ty 6 homolog (S. cerevisiae) (Supt6h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	5131400N11Rik; mKIAA0162; AI132449; SPT6	5131400N11Rik; mKIAA0162; AI132449; SPT6
Mus musculus	RefSeq	ILMN_253474	ILMN_253474	DYDC2	NM_027717.1	NM_027717.1		71200	113931159	NM_027717.1	Dydc2	NP_081993.1	ILMN_2927044	000430639	S	346	ACCAGGAACTGCCCTCGACCTCTTTTTCCTCAGACAAGACCCCAGCCCTG	14	-	41862694-41862739:41875184-41875187	14qB	Mus musculus DPY30 domain containing 2 (Dydc2), mRNA. XM_985792				MGC130531; 4933428D01Rik	MGC130531; 4933428D01Rik
Mus musculus	RefSeq	ILMN_222720	ILMN_222720	SYN1	NM_013680.3	NM_013680.3		20964	62177179	NM_013680.3	Syn1	NP_038708.2	ILMN_2762083	007650196	S	3036	CACCCCTCAGCGGCTCTGAACCCCCAAGAGAAGAGTCGGGAAGCAAAATA	X	-	20437658-20437707	XqA1.3	Mus musculus synapsin I (Syn1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, synaptic vesicles, and a specialized cortical cytoskeletal matrix [goid 48786] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Synapsin Ia; Syn-1; Synapsin Ib	Synapsin Ia; Syn-1; Synapsin Ib
Mus musculus	RefSeq	ILMN_222720	ILMN_222720	SYN1	NM_013680.3	NM_013680.3		20964	62177179	NM_013680.3	Syn1	NP_038708.2	ILMN_1235133	003990202	S	2933	CATATGTGGTCCTCATTCATGCCGCCTGTGGTAATGCGTACAGTGGCACT	X	-	20437761-20437810	XqA1.3	Mus musculus synapsin I (Syn1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, synaptic vesicles, and a specialized cortical cytoskeletal matrix [goid 48786] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence TAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Synapsin Ia; Syn-1; Synapsin Ib	Synapsin Ia; Syn-1; Synapsin Ib
Mus musculus	MEEBO	ILMN_192694	ILMN_192694	NRAS	scl22796.10.1295_58				7242161	NM_010937	Nras		ILMN_2708269	000430021	S	2828	GAAGGGGGAACAAACATTTGCTATGCTCCTGAGTGCTAACACTGGGCTCA						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192694	ILMN_192694	NRAS	scl22796.10.1295_58				7242161	NM_010937	Nras		ILMN_2708270	004150634	S	2831	GGGGGAACAAACATTTGCTATGCTCCTGAGTGCTAACACTGGGCTCATTC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200647	ILMN_200647	LOC383416	XM_357042.1	XM_357042.1			38084718	XM_357042.1	LOC383416		ILMN_1234575	007100070	S	174	GGCCAACAATGCAAAGGCACTTGGGAAGCCATCTCGAAGCTACACGGCCA										
Mus musculus	RefSeq	ILMN_197790	ILMN_232569	LOC632412	XM_991055.1	XM_991055.1		632412	94399613	XM_991055.1	LOC632412	XP_996149.1	ILMN_1219620	004730768	S	788	AGGCTGGCCTACGCTTTGAGTCTGGCCTGCGCTTTGGCCTGCATACCGAA				15qD1	PREDICTED: Mus musculus similar to alpha-1-B glycoprotein (LOC632412), mRNA.					
Mus musculus	Riken	ILMN_202876	ILMN_202876	A130052C08RIK	ri|A130052C08|PX00123N14|AK037815|602					AK037815	A130052C08Rik		ILMN_2552983	004180095	S	2	GCTAATGGTAGCTGTGAGCTGTCTGCCTGCCGGCATGAGCATCTTCTGTG										
Mus musculus	RefSeq	ILMN_212499	ILMN_212499	RANBP17	NM_023146.1	NM_023146.1		66011	13249348	NM_023146.1	Ranbp17	NP_075635.1	ILMN_2876169	004150086	S	3990	AGCTGAGGGTGGCAAGTTGTATCTGGAAGCAGCTCTGCCTTCTGACCACC	11	-	33112645-33112694	11qA4	Mus musculus RAN binding protein 17 (Ranbp17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [evidence TAS]	4932704E15Rik	4932704E15Rik
Mus musculus	RefSeq	ILMN_199703	ILMN_199703	LOC383842	XM_357289.1	XM_357289.1			38076256	XM_357289.1	LOC383842		ILMN_2536174	002940634	S	1079	TCCATCGGATCCCTGGTGCTGCTAGGCGTGTTGCAGTTGTGGAGCATGAC										
Mus musculus	RefSeq	ILMN_237867	ILMN_237867	RFWD3	NM_146218.2	NM_146218.2		234736	31542199	NM_146218.2	Rfwd3	NP_666330.2	ILMN_2944546	000360471	S	3683	ACAGTTGAGGTAATACATGCCTTTGGTCCCAGCACGCTGAAGGCAGAAAC	8	-	114158327-114158376	8qE1	Mus musculus ring finger and WD repeat domain 3 (Rfwd3), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BC027246; MGC27888	BC027246; MGC27888
Mus musculus	RefSeq	ILMN_194091	ILMN_194091	TSPAN8	NM_146010.1	NM_146010.1		216350	22122474	NM_146010.1	Tspan8	NP_666122.1	ILMN_1220261	000060593	S	1119	GAAGTATCTCACTGAGGCAGTCTACAGATATCTTCACAGGTATTCACTGT	10	+	115286546-115286595	10qD2	Mus musculus tetraspanin 8 (Tspan8), mRNA.				Tm4sf3; MGC38363; E330007O21Rik; C76990	Tm4sf3; MGC38363; E330007O21Rik; C76990
Mus musculus	RefSeq	ILMN_211294	ILMN_211294	MAP3K1	NM_011945.2	NM_011945.2		26401	101944545	NM_011945.2	Map3k1	NP_036075.2	ILMN_2614380	000730753	S	6710	GTGCTGTGTGACTATGACTCCTAAGACTTCCAGGGCTTAAGGGCTAACTC	13	-	112536844-112536893	13qD2.2	Mus musculus mitogen-activated protein kinase kinase kinase 1 (Map3k1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [evidence IMP]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Catalysis of the phosphorylation of tyrosine and threonine residues in a c-Jun NH2-terminal kinase (JNK), a member of a subgroup of mitogen-activated protein kinases (MAPKs), which signal in response to cytokines and exposure to environmental stress. JUN kinase kinase (JNKK) is a dual-specificity protein kinase kinase and requires activation by a serine/threonine kinase JUN kinase kinase kinase [goid 8545] [evidence IDA]	Mekk; MAPKKK1; MEKK1	Mekk; MAPKKK1; MEKK1
Mus musculus	RefSeq	ILMN_211294	ILMN_211294	MAP3K1	NM_011945.2	NM_011945.2		26401	101944545	NM_011945.2	Map3k1	NP_036075.2	ILMN_3006611	001030170	S	6357	CTGAGGGACCTCAGCTAATCAGTATTACCATGTAGATCAACATGCCCGCC	13	-	112537197-112537246	13qD2.2	Mus musculus mitogen-activated protein kinase kinase kinase 1 (Map3k1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IMP]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [evidence IMP]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Catalysis of the phosphorylation of tyrosine and threonine residues in a c-Jun NH2-terminal kinase (JNK), a member of a subgroup of mitogen-activated protein kinases (MAPKs), which signal in response to cytokines and exposure to environmental stress. JUN kinase kinase (JNKK) is a dual-specificity protein kinase kinase and requires activation by a serine/threonine kinase JUN kinase kinase kinase [goid 8545] [evidence IDA]	Mekk; MAPKKK1; MEKK1	Mekk; MAPKKK1; MEKK1
Mus musculus	RefSeq	ILMN_221364	ILMN_221364	SERPINF2	NM_008878.1	NM_008878.1		18816	6679382	NM_008878.1	Serpinf2	NP_032904.1	ILMN_3001824	005290669	S	2059	TTGTCCTCCCCTGCCAGGAATCTTGGGGACTGAGGCAAGGAAGGGACCCT	11	-	75245301-75245350	11qB5	Mus musculus serine (or cysteine) peptidase inhibitor, clade F, member 2 (Serpinf2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Pli; Serpimf2; AI747498	Pli; Serpimf2; AI747498
Mus musculus	RefSeq	ILMN_221364	ILMN_221364	SERPINF2	NM_008878.1	NM_008878.1		18816	6679382	NM_008878.1	Serpinf2	NP_032904.1	ILMN_3001827	001090768	S	1780	CCTAACTTAGGGTCCCTCCACATTTGTAAGCAGAGGCTGGAGAGGCCATC	11	-	75245580-75245629	11qB5	Mus musculus serine (or cysteine) peptidase inhibitor, clade F, member 2 (Serpinf2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Pli; Serpimf2; AI747498	Pli; Serpimf2; AI747498
Mus musculus	RefSeq	ILMN_221364	ILMN_221364	SERPINF2	NM_008878.1	NM_008878.1		18816	6679382	NM_008878.1	Serpinf2	NP_032904.1	ILMN_2769089	000770059	S	1916	CATGGTTGGAGGCTGACCTACCCTACAAGAGTGTCCCTTGCTGAAGACAT	11	-	75245444-75245493	11qB5	Mus musculus serine (or cysteine) peptidase inhibitor, clade F, member 2 (Serpinf2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	Pli; Serpimf2; AI747498	Pli; Serpimf2; AI747498
Mus musculus	RefSeq	ILMN_212327	ILMN_212327	2810422O20RIK	NM_027279.2	NM_027279.2		69962	31980619	NM_027279.2	2810422O20Rik	NP_081555.2	ILMN_2625188	003440377	S	1215	AAACATTCCTCAGGCTATTAAGTAGGAGTGGCCGGGTGCTTCTGGCCAGC	1	+	165927132-165927181	1qH2.2	Mus musculus RIKEN cDNA 2810422O20 gene (2810422O20Rik), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]	C78571	C78571
Mus musculus	RefSeq	ILMN_209930	ILMN_209930	PKD1L1	XM_126005.7	XM_126005.7		171395	149261608	XM_126005.7	Pkd1l1	XP_126005.7	ILMN_2600546	003450458	S	5691	TCTGCTCTGGTCAAGCTCTGTGGCCTGGGCTATCTCTGGATCAGCTTCCC	11	-	8767170-8767219	11qA1	PREDICTED: Mus musculus polycystic kidney disease 1 like 1 (Pkd1l1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]			
Mus musculus	RefSeq	ILMN_214887	ILMN_214887	SEPT8	NM_033144.1	NM_033144.1		20362	39930476	NM_033144.1	Sept8	NP_149156.1	ILMN_1218866	004850091	S	3863	GGGATCTACTCCTGTTTTTCCCGTCATCTGTTGGCTTCAGGAGGACTGCC	11	+	53355432-53355481	11qB1.3	Mus musculus septin 8 (Sept8), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Sepl; AW046166; mKIAA0202	Sepl; AW046166; mKIAA0202
Mus musculus	MEEBO	ILMN_184915	ILMN_184915	SH3BGRL2	scl36654.9_715				31542071	NM_172507	Sh3bgrl2		ILMN_2622801	007000451	S	3025	TGCTGATGCCCAGACAGTGCCATTTGAATATTAGGTGACCGTGAAACACC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199946	ILMN_199946	LOC384095	XM_357417.1	XM_357417.1			38079118	XM_357417.1	LOC384095		ILMN_2537050	005870747	S	26	ACAGGGAGGGACAGATACCAACACATCCTGGTGGTTTCATCAATGCTGAC										
Mus musculus	RefSeq	ILMN_198861	ILMN_235610	C86695	NM_001081662.1	NM_001081662.1		97476	126157471	NM_001081662.1	C86695	NP_001075131.1	ILMN_2533182	003780242	S	1224	TGTTCGCAACCAGACCCTGTATAGAGTTCCACAGGGCATCCGCTGGCCGT	8	+	23074112-23074161	8qA2	Mus musculus expressed sequence C86695 (C86695), mRNA.				AL590619.8	AL590619.8
Mus musculus	MEEBO	ILMN_218499	ILMN_218499	C77080	scl097130.1_10				51709472	XM_110498	C77080		ILMN_2696592	007150575	S	4798	CAATCAAAGTAAGCACTGTTCTGCCCCACGATGCAGGATGCAGGGTCGCC										
Mus musculus	Riken	ILMN_202377	ILMN_202377	4930542C16RIK	ri|4930542C16|PX00034D13|AK016018|1093					AK016018	4930542C16Rik		ILMN_2549145	004490605	S	910	GCTTGATGTGGATGGAAGTGGCAGTGGGGGGTTCGTCTGGGTAGTATAAG										
Mus musculus	MEEBO	ILMN_190364	ILMN_190364	SEMA6C	scl22889.20_1				6755463	NM_011351	Sema6c		ILMN_2593699	001850201	S	636	TGGACCTCAGCCTCCACTCCGTTCTGCAAAGTATGACTCCAAGTGGCTTC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]			
Mus musculus	RefSeq	ILMN_216909	ILMN_216909	MBD2	NM_010773.1	NM_010773.1		17191	7706608	NM_010773.1	Mbd2	NP_034903.1	ILMN_2676806	001230504	S	1620	GATGTATTTTTGATGTATATATCTATTATTCCAAATGATGTTTATTTTGA	18	+	70785451-70785500	18qE2	Mus musculus methyl-CpG binding domain protein 2 (Mbd2), mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex, occurring at the level of an individual cell [goid 43623] [evidence IMP]; Female behaviors associated with the care and rearing of offspring [goid 42711] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with a methylated cytosine/guanine dinucleotide [goid 8327] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme [goid 35197] [evidence IDA]	MBD2a	MBD2a
Mus musculus	MEEBO	ILMN_186397	ILMN_186397	SCL000412.1_36	scl000412.1_36	AK052384.1			26095154	AK052384.1	scl000412.1_36		ILMN_2435196	005910132	S	5	GACGCAATCCCTTCGAGATCTTGGCACAAGGCAATTCTATCCAACCGGCT										
Mus musculus	RefSeq	ILMN_200405	ILMN_245598	GM5	XM_919897.2	XM_919897.2		194292	94375805	XM_919897.2	Gm5	XP_924990.1	ILMN_1218070	005270433	S	481	CAGGAGAGAAGCATCAAGATGACCTGATTTCACCACAAGCCTGGATTGCT				5qG3	PREDICTED: Mus musculus gene model 5, (NCBI) (Gm5), mRNA.					
Mus musculus	MEEBO	ILMN_189055	ILMN_189055	TRPC3	scl22234.12.440_43				9507206	NM_019510	Trpc3		ILMN_2457959	002260324	S	10	GAAAGTACGGTTACACTACATATTTAAATTTCATGGGGTTGTTCAAAAAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_224082	ILMN_224082	3110045G13RIK	scl0002006.1_8				33239428	NM_152799	3110045G13Rik		ILMN_1252813	004290347	S	2668	TGGCTGGGCAGTAGGGGACTGCTGAATATGCTCCCCACCATGGGATGTGG										
Mus musculus	RefSeq	ILMN_211146	ILMN_236469	BGLAP-RS1	NM_031368.3	NM_031368.3		12095	83776590	NM_031368.3	Bglap-rs1	NP_112736.2	ILMN_1220829	000460402	S	250	CCAGCGGCCCTGAGTCTGACAAAGCCTTCATGTCCAAGCAGGAGGGCAAT	3	-	88173048-88173074:88173218-88173240	3qF1	Mus musculus bone gamma-carboxyglutamate protein, related sequence 1 (Bglap-rs1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC123552; mOC-X; ORG; AI461847	MGC123552; mOC-X; ORG; AI461847
Mus musculus	RefSeq	ILMN_211731	ILMN_236469	BGLAP-RS1	NM_031368.3	NM_031368.3		12095	83776590	NM_031368.3	Bglap-rs1	NP_112736.2	ILMN_1233122	003450521	S	297	AATAAGGTAGTGAACAGACTCCGGCGCTACCTTGGAGCTTCAGTCCCCAG	3	-	88172795-88172810:88173017-88173050	3qF1	Mus musculus bone gamma-carboxyglutamate protein, related sequence 1 (Bglap-rs1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC123552; mOC-X; ORG; AI461847	MGC123552; mOC-X; ORG; AI461847
Mus musculus	RefSeq	ILMN_211061	ILMN_211061	RRBP1	NM_133626.2	NM_133626.2		81910	124486725	NM_133626.2	Rrbp1	NP_598329.1	ILMN_2612079	006840600	S	2489	CCTTCGATATCATTCTCCTTGGTGCAAGGCCACATGGGACACAAATCCTA	2	-	143811751-143811800	2qG1	Mus musculus ribosome binding protein 1 (Rrbp1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1700087N07Rik; 5730465C04Rik; mRRp2; mRRp1.8; p180; mRRp5.4; mRRp41; mKIAA1398; mRRp15b; mRRp10; mRRp15a; ES/130; mRRp47; mRRp0; mRRp16.8	1700087N07Rik; 5730465C04Rik; mRRp2; mRRp1.8; p180; mRRp5.4; mRRp41; mKIAA1398; mRRp15b; mRRp10; mRRp15a; ES/130; mRRp47; mRRp0; mRRp16.8
Mus musculus	MEEBO	ILMN_216949	ILMN_216949	CMYA5	scl076469.1_65	NM_023821.2			46391092	NM_023821.2	Cmya5		ILMN_2706640	001050739	S	10777	TGTTTATAAACGCCGAGAGTGGACAGCTGCTCTTCATCGTGAGGCACAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]		
Mus musculus	MEEBO	ILMN_216949	ILMN_216949	CMYA5	scl076469.1_65	NM_023821.2			46391092	NM_023821.2	Cmya5		ILMN_2677339	004280086	S	11200	CCCCGAGAAAAGGACTGTGTCTGCTCTGTTGGTCGAATTCCCCAGTGGCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220853	ILMN_230010	6330505N24RIK	NM_001033301.2	NM_001033301.2		229474	141801767	NM_001033301.2	6330505N24Rik	NP_001028473.1	ILMN_1220688	004390553	S	3903	CTCATACTCAGGACCCTATCCCTAACTCCTGCCCCGAGACAAAGATCCAA	3	-	84248085-84248134	3qF1	Mus musculus RIKEN cDNA 6330505N24 gene (6330505N24Rik), mRNA.				Gm126	Gm126
Mus musculus	RefSeq	ILMN_209082	ILMN_209082	GTF2H1	NM_008186.3	NM_008186.3		14884	142388290	NM_008186.3	Gtf2h1	NP_032212.2	ILMN_2637811	005890605	S	2509	AAGTAGAAGGCACATGTGCGGGAGTCGTGGTCAGTGCAGGACGTCGTCAG	7	+	54078943-54078992	7qB4	Mus musculus general transcription factor II H, polypeptide 1 (Gtf2h1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]		62kDa; AW743425; p62; AW822074; C77871	62kDa; AW743425; p62; AW822074; C77871
Mus musculus	RefSeq	ILMN_209082	ILMN_209082	GTF2H1	NM_008186.3	NM_008186.3		14884	142388290	NM_008186.3	Gtf2h1	NP_032212.2	ILMN_2592352	003800762	S	204	GGCGACTTCATCAGAAGAAGTGTTGCTGATTGTGAAGAAGGTTCGTCAGA	7	+	54057059-54057108	7qB4	Mus musculus general transcription factor II H, polypeptide 1 (Gtf2h1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]		62kDa; AW743425; p62; AW822074; C77871	62kDa; AW743425; p62; AW822074; C77871
Mus musculus	RefSeq	ILMN_196545	ILMN_196545	4930597A21RIK	XM_147490.1	XM_147490.1			20879997	XM_147490.1	4930597A21Rik		ILMN_2524763	002750152	S	418	CCTTGCAGGGGTCCTCTGAACATCACTGGGTTCCAGGATCTGATTCGCTA										
Mus musculus	RefSeq	ILMN_225768	ILMN_225768	TMPO	NM_001080129.1	NM_001080129.1		21917	121949764	NM_001080129.1	Tmpo	NP_001073598.1	ILMN_3022428	005390494	I	995	GCAGGCATTAACTAGGGAGTCCACGAGAGGGTCGAGAAGAACTCCAAGGA	10	-	90616027-90616076	10qC2	Mus musculus thymopoietin (Tmpo), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence ISO]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	5630400D24Rik; TP; AI195756; AI606875; AW214352; AW547477; LAP2	5630400D24Rik; TP; AI195756; AI606875; AW214352; AW547477; LAP2
Mus musculus	RefSeq	ILMN_225768	ILMN_225768	TMPO	NM_001080129.1	NM_001080129.1		21917	121949764	NM_001080129.1	Tmpo	NP_001073598.1	ILMN_3094743	006770349	A	693	GAGAAGAAGCTGTTGAAGCTGAGGGAGCAGGGAACTGAATCGAGATCCTC	10	-	90626876-90626925	10qC2	Mus musculus thymopoietin (Tmpo), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence ISO]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	5630400D24Rik; TP; AI195756; AI606875; AW214352; AW547477; LAP2	5630400D24Rik; TP; AI195756; AI606875; AW214352; AW547477; LAP2
Mus musculus	Riken	ILMN_205864	ILMN_205864	B930014J04RIK	ri|B930014J04|PX00163C02|AK047058|2115					AK047058	B930014J04Rik		ILMN_1250800	003390598	S	2018	TTCCTACAGTGGGTGTACAGACCCCTACTTCCCATACCTTTCTCTTCACC										
Mus musculus	MEEBO	ILMN_192824	ILMN_192824	4933432I09RIK	scl48688.4.1_105						4933432I09Rik		ILMN_2491666	004480139	S	15	TTGGAGATATCTGGGCCAGGTGGGCCTGGCTGCCTTTAACCAAAGGGAGG										
Mus musculus	MEEBO	ILMN_189801	ILMN_189801	9430029L20RIK	scl0109249.1_10						9430029L20Rik		ILMN_2464474	000460184	S	17	AGTACTTACTGTGGGTAGGCTGCCTGTGCTCATTTGCCCAATGCCTGTGG										
Mus musculus	RefSeq	ILMN_212204	ILMN_212204	DEXI	NM_021428.4	NM_021428.4		58239	109809749	NM_021428.4	Dexi	NP_067403.2	ILMN_2623929	007100433	S	1205	CTCTCCAGGTTGACAGAACTGAGATACTGCACTGGGAAGGCCATGCTTCC	16	-	10530434-10530483	16qA1	Mus musculus dexamethasone-induced transcript (Dexi), mRNA.				D16Bwg0586e; AI836170; Myle; AW413143; 1810029J14Rik	D16Bwg0586e; AI836170; Myle; AW413143; 1810029J14Rik
Mus musculus	RefSeq	ILMN_212204	ILMN_212204	DEXI	NM_021428.4	NM_021428.4		58239	109809749	NM_021428.4	Dexi	NP_067403.2	ILMN_2727490	002470044	S	1211	AGGTTGACAGAACTGAGATACTGCACTGGGAAGGCCATGCTTCCCTGGCT	16	-	10530428-10530477	16qA1	Mus musculus dexamethasone-induced transcript (Dexi), mRNA.				D16Bwg0586e; AI836170; Myle; AW413143; 1810029J14Rik	D16Bwg0586e; AI836170; Myle; AW413143; 1810029J14Rik
Mus musculus	RefSeq	ILMN_217251	ILMN_217251	BC027072	NM_146082.3	NM_146082.3		225004	55742822	NM_146082.3	BC027072	NP_666194.2	ILMN_1236750	002810300	S	4503	CGGGTACAGATGTGGCTGGCCTTAGACTCTGCGTTCTTCATTATGTTCTA	17	-	72093348-72093397	17qE1.3	Mus musculus cDNA sequence BC027072 (BC027072), mRNA.				MGC38716	MGC38716
Mus musculus	RefSeq	ILMN_194850	ILMN_244568	GTPBP1	NM_013818.2	NM_013818.2		14904	70778896	NM_013818.2	Gtpbp1	NP_038846.2	ILMN_1220313	006580735	S	246	CTTCGGCAGATGTGGGAGAGGATGGACGAGGGATGCGGAGAGACCATATA	15	+	79524628-79524677	15qE1	Mus musculus GTP binding protein 1 (Gtpbp1), mRNA.			Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	Gtpbp; AW045683; GP-1; C85212; AL022987	Gtpbp; AW045683; GP-1; C85212; AL022987
Mus musculus	RefSeq	ILMN_198479	ILMN_313368	LOC630127	XR_034372.1	XR_034372.1		630127	149255028	XR_034372.1	LOC630127		ILMN_1228032	003120731	S	344	GAAACACCAAGCAGAAGGATGATGAGAAGACGCCGCAGAGAGCAGTCTCC	6	-	18102484-18102533		PREDICTED: Mus musculus similar to CDK105 (LOC630127), misc RNA.					
Mus musculus	RefSeq	ILMN_216187	ILMN_251928	ARMC3	NM_001081083.1	NM_001081083.1		70882	124487326	NM_001081083.1	Armc3	NP_001074552.1	ILMN_2668224	001850437	S	2836	GAACCTGCTGAAGCTGCGCAGCAAAGAGGCTGACCTCTACCGCTTTCTGT	2	+	19210479-19210528	2qA3	Mus musculus armadillo repeat containing 3 (Armc3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4921513G22Rik	4921513G22Rik
Mus musculus	RefSeq	ILMN_251928	ILMN_251928	ARMC3	NM_001081083.1	NM_001081083.1		70882	124487326	NM_001081083.1	Armc3	NP_001074552.1	ILMN_3143651	001440706	A	2711	CTGGTGCGTGGTGAGTACAGCCGAGGGTGGAACGAAGTGAAGCTGGTGAA	2	+	19207666-19207715	2qA3	Mus musculus armadillo repeat containing 3 (Armc3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4921513G22Rik	4921513G22Rik
Mus musculus	MEEBO	ILMN_215401	ILMN_215401	NPC1L1	scl40543.19.1_28				46402232	NM_207242	Npc1l1		ILMN_2659036	005310554	S	3876	CCACAGTACCCCTTCCCGGCTGATGCAAACACCAGTGACTATGTTAACTA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of, within or between cells [goid 30301] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184167	ILMN_184167	UBE3A	NM_173010.3	NM_173010.3		22215	146198826	NM_173010.3	Ube3a	NP_766598.1	ILMN_2416413	007150603	S	3719	TGGTAATACAGAAGCCTTAATGGGAATATCCTAGTATTATCTCTACAATA				7qC	Mus musculus ubiquitin protein ligase E3A (Ube3a), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	KIAA4216; Hpve6a; A130086L21Rik; 5830462N02Rik; mKIAA4216; 4732496B02	KIAA4216; Hpve6a; A130086L21Rik; 5830462N02Rik; mKIAA4216; 4732496B02
Mus musculus	RefSeq	ILMN_257529	ILMN_257529	FKBP6	NM_033571.1	NM_033571.1		94244	15809007	NM_033571.1	Fkbp6	NP_291049.1	ILMN_2829203	001850632	S	1087	CAGACACCCTGCCAGCCCTGACTGTTACTCCAGGTTCACACACAGTAGCA	5	-	135576588-135576637	5qG2	Mus musculus FK506 binding protein 6 (Fkbp6), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The modification of peptidyl-proline [goid 18208] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IDA]; Interacting selectively with the immunosuppressant FK506 [goid 5528] [evidence IDA]	36kDa; D5Ertd724e; AU017274; 1700008G22Rik	36kDa; D5Ertd724e; AU017274; 1700008G22Rik
Mus musculus	Riken	ILMN_201645	ILMN_201645	1110032A03RIK	ri|1110032A03|R000017K16|AK004016|1184					AK004016	1110032A03Rik		ILMN_1215043	000650762	S	178	TCCGGCTTACCTGCCGGCGCTCTCCGGGGCGCACATTTCTTACGTCACTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Mus musculus	RefSeq	ILMN_199617	ILMN_199617	LOC383740	XM_357218.1	XM_357218.1			38075280	XM_357218.1	LOC383740		ILMN_1233870	006450367	S	223	CTGGCCAATGCCATCAAATACTTCCTCACCCAGTTTGCAGGGAACCTGGC										
Mus musculus	Riken	ILMN_204261	ILMN_204261	SURF6	ri|A830067G13|PX00156O13|AK043984|1372					AK043984	Surf6		ILMN_1222350	001570215	S	1288	CAGAGGCCATTTTGACCATGCATGCTTGCTGGCTGGGTTTGGGTTCCATC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure found in the nucleolus, which contains nearly completed preribosomal particles destined for the cytoplasm [goid 1652] [evidence IDA]	The aggregation, arrangement and bonding together of the mature ribosome and of its subunits [goid 42255] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]		
Mus musculus	RefSeq	ILMN_217574	ILMN_314557	LOC100045940	XM_001475220.1	XM_001475220.1		100045940	149266945	XM_001475220.1	LOC100045940	XP_001475270.1	ILMN_1212682	005910411	S	327	CTTCAAGCGGGTGCAGCAGCGGCACATTCTGGAGAGCGAGAAGTGCCAGC					PREDICTED: Mus musculus similar to transcription factor mammalian MafA (LOC100045940), mRNA.					
Mus musculus	RefSeq	ILMN_199819	ILMN_224840	C7	XM_904680.3	XM_904680.3		109828	149266316	XM_904680.3	C7	XP_909773.3	ILMN_1255035	000070678	S	1822	GGAGAGAAGGTGACTCTTTCCTGTGTGGGGGGTATGTCCTTAGAGGGTCC				15qA1	PREDICTED: Mus musculus complement component 7 (C7), mRNA.					
Mus musculus	RefSeq	ILMN_199817	ILMN_224840	C7	XM_904680.3	XM_904680.3		109828	149266316	XM_904680.3	C7	XP_909773.3	ILMN_2536590	006250524	S	2066	GCAGAGGACAGAGCATCTCCATCACAGCCATAAAGCCCTGTGCAGAAGAA				15qA1	PREDICTED: Mus musculus complement component 7 (C7), mRNA.					
Mus musculus	RefSeq	ILMN_189082	ILMN_261713	TTYH1	NM_001001454.2	NM_001001454.2		57776	141803438	NM_001001454.2	Ttyh1	NP_001001454.1	ILMN_1243836	001090561	S	335	ATGGTAACAGCGAGACCAGCGATGGGGTGTCCCAGCTCAGCTCAGCACTG	7	+	4076245-4076294	7qA1	Mus musculus tweety homolog 1 (Drosophila) (Ttyh1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The portion of the plasma membrane surrounding a filopodium [goid 31527] [evidence IDA]; The end of a filopodium distal to the body of the cell [goid 32433] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IDA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	6330408P11Rik; tty; 4930459B04Rik	6330408P11Rik; tty; 4930459B04Rik
Mus musculus	RefSeq	ILMN_217505	ILMN_217505	LPO	NM_080420.1	NM_080420.1		76113	17975592	NM_080420.1	Lpo	NP_536345.1	ILMN_2684053	006960575	S	2598	TTTAAGTTGGACACCGAGGCCAAAGGCTGCCTCAGCCTTCCCAGCCCATC	11	-	87620209-87620258	11qC	Mus musculus lactoperoxidase (Lpo), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	5830499B15Rik	5830499B15Rik
Mus musculus	RefSeq	ILMN_194965	ILMN_253619	GTPBP8	NM_025332.2	NM_025332.2		66067	142360315	NM_025332.2	Gtpbp8	NP_079608.1	ILMN_1256281	005870180	S	395	TCCTCTTTGATAAAGGCCTTATTTTCCCTGGCCCCTGATGTAGAAGTCAG	16	-	44745523-44745572	16qB4	Mus musculus GTP-binding protein 8 (putative) (Gtpbp8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC130126; MGC130125; 0610037H22Rik	MGC130126; MGC130125; 0610037H22Rik
Mus musculus	RefSeq	ILMN_227328	ILMN_227328	ZCCHC4	NM_030185.1	NM_030185.1		78796	124249221	NM_030185.1	Zcchc4	NP_084461.1	ILMN_2792877	001450743	S	1739	TGGCGCGAGGAGATAGCGAAGGCATTCCTGGTGGAAGGAGCATGCCGTTT				5qC1	Mus musculus zinc finger, CCHC domain containing 4 (Zcchc4), mRNA. XM_923669 XM_923685 XM_923691 XM_977051 XM_977085 XM_977122 XM_977192		The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	4930449I23Rik	4930449I23Rik
Mus musculus	RefSeq	ILMN_233678	ILMN_233678	KCNJ15	NM_001039057.1	NM_001039057.1		16516	84872184	NM_001039057.1	Kcnj15	NP_001034146.1	ILMN_3125966	002060315	A	4743	CTGTGACCGCAGACAAAGGAGAGACGCACCTCTGACCCATACAGTGAGCC	16	+	95507003-95507052	16qC4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 15 (Kcnj15), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IDA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IDA]	AI267127; 4930414N08Rik; IRKK; AI182284; Kir4.2	AI267127; 4930414N08Rik; IRKK; AI182284; Kir4.2
Mus musculus	RefSeq	ILMN_211728	ILMN_211728	PDZK1IP1	NM_026018.2	NM_026018.2		67182	141802816	NM_026018.2	Pdzk1ip1	NP_080294.1	ILMN_2618935	003710647	S	756	CACACCCATGTGACAAGCTTCTCTGTGGCCCTAGTCCCCAGGCTACAGGG	4	+	114761660-114761709	4qD1	Mus musculus PDZK1 interacting protein 1 (Pdzk1ip1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Map17; 0610007F13Rik; 2700030M23Rik; AU046042; RP23-246H17.1	Map17; 0610007F13Rik; 2700030M23Rik; AU046042; RP23-246H17.1
Mus musculus	MEEBO	ILMN_211127	ILMN_211127	ANAPC10	scl068999.4_382	NM_026904.1			35900979	NM_026904.1	Anapc10		ILMN_2740929	003450093	S	2642	CTGAACATTGTGTCCTTAGATAGCCAGTTTCTGCTCAGTGGCCACCTGGC						A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215254	ILMN_215254	RPS6KB1	NM_028259.3	NM_028259.3		72508	146141142	NM_028259.3	Rps6kb1	NP_082535.1	ILMN_1222291	003360202	S	970	CACAGCCAGTATTGCAGTGCTTTGTGCTTTTCGAATCCAGACAGGGTTGA				11qC	Mus musculus ribosomal protein S6 kinase, polypeptide 1 (Rps6kb1), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	p70s6k; 70kDa; 4732464A07Rik; S6K1; AI314060; 2610318I15Rik; AI256796; AA959758; p70/85s6k	p70s6k; 70kDa; 4732464A07Rik; S6K1; AI314060; 2610318I15Rik; AI256796; AA959758; p70/85s6k
Mus musculus	RefSeq	ILMN_215254	ILMN_215254	RPS6KB1	NM_028259.3	NM_028259.3		72508	146141142	NM_028259.3	Rps6kb1	NP_082535.1	ILMN_1235678	002490397	S	1060	CTCCATGGCTTTGGGGCATTTACATCAAAAAGGGATCATCTACAGAGACC				11qC	Mus musculus ribosomal protein S6 kinase, polypeptide 1 (Rps6kb1), mRNA.	The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IDA]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	p70s6k; 70kDa; 4732464A07Rik; S6K1; AI314060; 2610318I15Rik; AI256796; AA959758; p70/85s6k	p70s6k; 70kDa; 4732464A07Rik; S6K1; AI314060; 2610318I15Rik; AI256796; AA959758; p70/85s6k
Mus musculus	Riken	ILMN_207308	ILMN_207308	4833442N18RIK	ri|4833442N18|PX00638D14|AK076531|1735					AK076531	4833442N18Rik		ILMN_1222426	005690326	S	1326	TGCTCAGGGCATTACAGCTGCATCCTTCCCTCTGTGGGGGTGGAGGGAGG										
Mus musculus	RefSeq	ILMN_212014	ILMN_212014	PIP	NM_008843.3	NM_008843.3		18716	142352912	NM_008843.3	Pip	NP_032869.2	ILMN_2621766	006520646	S	399	GTCCTAATGATATGGCAGTGGTGCCCATCACAGCAAACCGGTACTATACT	6	+	41801889-41801938	6qB2.1	Mus musculus prolactin induced protein (Pip), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			mSMGP; GP17; GCDFP-15	mSMGP; GP17; GCDFP-15
Mus musculus	MEEBO	ILMN_186958	ILMN_186958	6446580_236	6446580_236						6446580_236		ILMN_1229196	006590608	S	1	GGCATTGGATGGGTAAGTGCGGAAGCATACATGCCACAAATGTCATATAC										
Mus musculus	RefSeq	ILMN_202301	ILMN_208731	GSTCD	NM_026231.2	NM_026231.2		67553	55926230	NM_026231.2	Gstcd	NP_080507.2	ILMN_2548534	002970341	S	894	CTGGAACTGAAGGTGGCGTTCTCAAAGCTCACAGTGCAAGAAGATGCAGC	3	-	132745138-132745187	3qG3	Mus musculus glutathione S-transferase, C-terminal domain containing (Gstcd), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC74393; 4933434L15Rik	MGC74393; 4933434L15Rik
Mus musculus	RefSeq	ILMN_203310	ILMN_208731	GSTCD	NM_026231.2	NM_026231.2		67553	55926230	NM_026231.2	Gstcd	NP_080507.2	ILMN_2556329	002690075	S	878	TGCTCCCTCCAAGAGTCTGGAACTGAAGGTGGCGTTCTCAAAGCTCACAG	3	-	132745154-132745203	3qG3	Mus musculus glutathione S-transferase, C-terminal domain containing (Gstcd), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC74393; 4933434L15Rik	MGC74393; 4933434L15Rik
Mus musculus	RefSeq	ILMN_208731	ILMN_208731	GSTCD	NM_026231.2	NM_026231.2		67553	55926230	NM_026231.2	Gstcd	NP_080507.2	ILMN_2820369	005390543	S	2286	CGAAGCCTTAGCCGCCAGAGTCGTTCTCAGTGGCCAAGATTCCCTCCACA	3	-	132645798-132645847	3qG3	Mus musculus glutathione S-transferase, C-terminal domain containing (Gstcd), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC74393; 4933434L15Rik	MGC74393; 4933434L15Rik
Mus musculus	RefSeq	ILMN_196824	ILMN_196824	LOC239143	XM_139108.1	XM_139108.1			20877791	XM_139108.1	LOC239143		ILMN_2525931	006590609	S	5039	GAGATGGAGGCACTTTAGAGGCTCCAGCAAGACAGGGTACCCACTCTGTG										
Mus musculus	RefSeq	ILMN_236849	ILMN_236849	V1RH6	NM_134215.1	NM_134215.1		171249	58372163	NM_134215.1	V1rh6	NP_598976.1	ILMN_2867574	003460181	S	810	TGTGAGAGATGCAGTGTTTCAGGGTGCCATGGGAGGGGCCAGTGGTTATG	13	+	23103927-23103976	13qA3.1	Mus musculus vomeronasal 1 receptor, H6 (V1rh6), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_198007	ILMN_234348	UGT2B36	NM_001029867.1	NM_001029867.1		231396	71274183	NM_001029867.1	Ugt2b36	NP_001025038.1	ILMN_1235719	004040397	S	1506	TGGATGTGATTGGATTCCTGCTTGCTTTTGTGACATTCATTGTAGCCCTC	5	-	87495284-87495333	5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide B36 (Ugt2b36), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	RefSeq	ILMN_234348	ILMN_234348	UGT2B36	NM_001029867.1	NM_001029867.1		231396	71274183	NM_001029867.1	Ugt2b36	NP_001025038.1	ILMN_2955818	000840431	S	1375	CATTCACCATGACCAGCCTATGAAGCCCCTGGACAGAGCAGTCTTCTGGA	5	-	87495415-87495464	5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide B36 (Ugt2b36), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Mus musculus	Riken	ILMN_204270	ILMN_204270	9530082I15RIK	ri|9530082I15|PX00114O01|AK035657|2047					AK035657	9530082I15Rik		ILMN_1244117	000380243	S	1958	TGGACTCAATACTGGTCATTCCTCTATCTCCCTACAACCGCCATAGTGGC										
Mus musculus	RefSeq	ILMN_220938	ILMN_220938	SLC25A41	NM_175333.3	NM_175333.3		103775	142347984	NM_175333.3	Slc25a41	NP_780542.1	ILMN_1220879	004900551	S	1091	TTGCAAAAACCACCCAGGACTCGGATTAGAAAAGCGCTGGGAGTCCTCCA	17	-	57172280-57172329	17qD	Mus musculus solute carrier family 25, member 41 (Slc25a41), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	4933406J04Rik; AI507137	4933406J04Rik; AI507137
Mus musculus	Riken	ILMN_202928	ILMN_202928	5330430P07RIK	ri|5330430P07|PX00054C24|AK030554|2441					AK030554	5330430P07Rik		ILMN_1228363	002850274	S	2385	GGCTGGGGGTGCCCTTCAGCACTCCACACTCCGTTTCAATAAAGAATAAC										
Mus musculus	RefSeq	ILMN_191444	ILMN_191444	TNFRSF26	NM_175649.5	NM_175649.5		244237	148747386	NM_175649.5	Tnfrsf26	NP_783580.1	ILMN_2479124	005050220	S	2891	GGTGGTGCTTCTGCTCAAAGTTGTACAATATCACAGTATGTGCTTTGACC				7qF5	Mus musculus tumor necrosis factor receptor superfamily, member 26 (Tnfrsf26), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tnfrh3; Tnfrsf24	Tnfrh3; Tnfrsf24
Mus musculus	Riken	ILMN_206219	ILMN_206219	C130090G16RIK	ri|C130090G16|PX00172G21|AK081969|2132					AK081969	C130090G16Rik		ILMN_1242437	003420630	S	1738	GATGGGGCATCTGTCTTTTCTGTCCCTGGAACTGGGATTGGCACCTCCTT										
Mus musculus	RefSeq	ILMN_229586	ILMN_229586	PSG25	NM_054060.1	NM_054060.1		114868	75832036	NM_054060.1	Psg25	NP_473401.1	ILMN_2996933	006200358	S	2904	ACACCTCCTGGGTCTGTACACAGTGTCTGAGACACACTGCATACCAATGG	7	-	19105164-19105213	7qA2	Mus musculus pregnancy-specific glycoprotein 25 (Psg25), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		cea13; MGC117718	cea13; MGC117718
Mus musculus	RefSeq	ILMN_231987	ILMN_231987	CKLF	NM_001037841.2	NM_001037841.2		75458	111074535	NM_001037841.2	Cklf	NP_001032930.1	ILMN_3071183	007150242	I	982	GTTGGCCCCACACTGAGGAGATGTAGTAGTGCCTCATTTTAACCCCAGGC	8	+	106788018-106788067	8qD3	Mus musculus chemokine-like factor (Cklf), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	UCK-1; CKLF1; CKLF4; Cklf2; CKLF3; C32; 1810018M11Rik; CKLF5; 1700001C14Rik; Cklf6; HSPC224	UCK-1; CKLF1; CKLF4; Cklf2; CKLF3; C32; 1810018M11Rik; CKLF5; 1700001C14Rik; Cklf6; HSPC224
Mus musculus	RefSeq	ILMN_231987	ILMN_231987	CKLF	NM_001037841.2	NM_001037841.2		75458	111074535	NM_001037841.2	Cklf	NP_001032930.1	ILMN_3149944	006400044	A	115	GTCGGCCCTTCTGCTGTACTCTGAAATGCTTTGTGAAGTTCCTGCGGTTG	8	+	106774946-106774995	8qD3	Mus musculus chemokine-like factor (Cklf), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	UCK-1; CKLF1; CKLF4; Cklf2; CKLF3; C32; 1810018M11Rik; CKLF5; 1700001C14Rik; Cklf6; HSPC224	UCK-1; CKLF1; CKLF4; Cklf2; CKLF3; C32; 1810018M11Rik; CKLF5; 1700001C14Rik; Cklf6; HSPC224
Mus musculus	RefSeq	ILMN_217107	ILMN_231987	CKLF	NM_001037841.2	NM_001037841.2		75458	111074535	NM_001037841.2	Cklf	NP_001032930.1	ILMN_2729634	007610170	S	245	CACCGTTATTTTCTGTTTCCTAGTCTTATACACGTGTGGACTTGACAAGA	8	+	106781265-106781314	8qD3	Mus musculus chemokine-like factor (Cklf), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	UCK-1; CKLF1; CKLF4; Cklf2; CKLF3; C32; 1810018M11Rik; CKLF5; 1700001C14Rik; Cklf6; HSPC224	UCK-1; CKLF1; CKLF4; Cklf2; CKLF3; C32; 1810018M11Rik; CKLF5; 1700001C14Rik; Cklf6; HSPC224
Mus musculus	RefSeq	ILMN_211087	ILMN_211087	SCGN	NM_145399.1	NM_145399.1		214189	21703797	NM_145399.1	Scgn	NP_663374.1	ILMN_2612378	006860634	S	283	GACAGAGCTGGATGCCTTCTTTGATCATTTGCTGGCAAAATCTGGCACTG	13	-	24081644-24081693	13qA3.1	Mus musculus secretagogin, EF-hand calcium binding protein (Scgn), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC27615; RP23-462P2.6	MGC27615; RP23-462P2.6
Mus musculus	RefSeq	ILMN_211087	ILMN_211087	SCGN	NM_145399.1	NM_145399.1		214189	21703797	NM_145399.1	Scgn	NP_663374.1	ILMN_1227332	002750044	S	946	CAACAAGGATGGAAAGATCCAGAAGTCTGAGCTGGCACTGTGTCTTGGGC	13	-	24045741-24045790	13qA3.1	Mus musculus secretagogin, EF-hand calcium binding protein (Scgn), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC27615; RP23-462P2.6	MGC27615; RP23-462P2.6
Mus musculus	RefSeq	ILMN_211087	ILMN_211087	SCGN	NM_145399.1	NM_145399.1		214189	21703797	NM_145399.1	Scgn	NP_663374.1	ILMN_2827997	004180619	S	1160	CCAGAGGCAGCCATGATCTTGTCCCATGGGAAGCCCCATACAGCTTCTTC	13	-	24045527-24045576	13qA3.1	Mus musculus secretagogin, EF-hand calcium binding protein (Scgn), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC27615; RP23-462P2.6	MGC27615; RP23-462P2.6
Mus musculus	RefSeq	ILMN_197923	ILMN_234071	AU021092	NM_001033220.1	NM_001033220.1		239691	85701617	NM_001033220.1	AU021092	NP_001028392.1	ILMN_2529842	000990292	S	110	ACCATGGCAAACTTGATCCTGACTGCATTAGAAAAAGCCACCTTGTTCTT	16	-	5222214-5222263	16qA1	Mus musculus expressed sequence AU021092 (AU021092), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_234071	ILMN_234071	AU021092	NM_001033220.1	NM_001033220.1		239691	85701617	NM_001033220.1	AU021092	NP_001028392.1	ILMN_2825905	003840528	S	1261	TAAAAGTCTTGGGAGAGCAGGGCCAGGGAAAGCAGGGTTGGAGAGTGGGG	16	-	5211954-5212003	16qA1	Mus musculus expressed sequence AU021092 (AU021092), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200060	ILMN_234071	AU021092	NM_001033220.1	NM_001033220.1		239691	85701617	NM_001033220.1	AU021092	NP_001028392.1	ILMN_1251548	006660482	S	50	CTGCTGCTGGCCCTGCCACCACACTTCTCCTCAGTGTCATGGCCAGACAC	16	-	5222274-5222323	16qA1	Mus musculus expressed sequence AU021092 (AU021092), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222070	ILMN_222070	LRRC8A	NM_177725.3	NM_177725.3		241296	62388880	NM_177725.3	Lrrc8a	NP_808393.1	ILMN_2895213	002260291	S	3860	ATTTAGAGGCAGATTGGGCATGAGAGGTCAGCACTGGGAGGGCAGGCTCC	2	+	30118916-30118965	2qB	Mus musculus leucine rich repeat containing 8A (Lrrc8a), mRNA.				Lrrc8; mKIAA1437; MGC61242	Lrrc8; mKIAA1437; MGC61242
Mus musculus	RefSeq	ILMN_187014	ILMN_246564	NIPBL	NM_201232.1	NM_201232.1		71175	51371927	NM_201232.1	Nipbl	NP_957684.1	ILMN_2440428	006900021	S	8471	CGTATTTCCCAGCGTATTACGTAAAATGATTTTTATGTGCTTATGTGTGT	15	-	8242065-8242091:8242092-8242114	15qA1	Mus musculus Nipped-B homolog (Drosophila) (Nipbl), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		C79399; Idn3; 4933421G18Rik; 4921518A06Rik	C79399; Idn3; 4933421G18Rik; 4921518A06Rik
Mus musculus	RefSeq	ILMN_250396	ILMN_250396	CTGF	NM_010217.1	NM_010217.1		14219	6753877	NM_010217.1	Ctgf	NP_034347.1	ILMN_2909150	004010082	S	2165	AGAAATGGCTGGCTCAGGGTAAGGTCCGATTCCTACCAGGAAGTGCTTGC	10	+	24318316-24318365	10qA4	Mus musculus connective tissue growth factor (Ctgf), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IDA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IDA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]	Ccn2; Fisp12; Hcs24; fisp-12	Ccn2; Fisp12; Hcs24; fisp-12
Mus musculus	Riken	ILMN_207041	ILMN_207041	GCAT	ri|4833415L22|PX00028O03|AK076469|1737					AK076469	Gcat		ILMN_1248083	000450451	S	1634	TTCCAGAGGGCATTTCTAAGCCCCAAAGTGTCAGCGCAGGGGGCCAGGTA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + glycine = CoA + 2-amino-3-oxobutanoate [goid 8890] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198706	ILMN_255882	EG667794	XM_992520.1	XM_992520.1		667794	94408484	XM_992520.1	EG667794	XP_997614.1	ILMN_1243323	006220079	S	266	CACACAATTATTCCCAGATAGCAGAGAGAGGAGGCTCAGGAGGAAGACCC	X	-	163502773-163502822	XqF5	PREDICTED: Mus musculus predicted gene, EG667794 (EG667794), mRNA.					
Mus musculus	Riken	ILMN_204441	ILMN_204441	EPB4.1L2	ri|A730060B10|PX00151B09|AK043148|3359					AK043148	Epb4.1l2		ILMN_1224211	003870452	S	3218	GACGTGTTCTACCTCCGCACTACTAGGAAGCCAGCCTTAGCATGTACAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISS]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISS]; Interacting selectively with spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers [goid 30507] [evidence ISS]		
Mus musculus	RefSeq	ILMN_217663	ILMN_217663	FAM110A	NM_146127.2	NM_146127.2		73847	145864486	NM_146127.2	Fam110a	NP_666239.1	ILMN_2686097	002030674	S	113	CTCGGAAGAGCTCGCCGGTCTTCACACGTAGTAGCCTTCTCAGGTCTGCA				2qG3	Mus musculus family with sequence similarity 110, member A (Fam110a), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			1700008J10Rik; MGC30344; AI747080	1700008J10Rik; MGC30344; AI747080
Mus musculus	RefSeq	ILMN_185442	ILMN_185442	ZNRD1	NM_023162.3	NM_023162.3		66136	32129274	NM_023162.3	Znrd1	NP_075651.1	ILMN_2971481	001300358	S	316	GTTCAACAAGCTGGGGGCTACCATACCTTTGTCTGTGGATGAGGGACCTG	17	-	36565900-36565949	17qB1	Mus musculus zinc ribbon domain containing, 1 (Znrd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1110014N07Rik; Rpa12	1110014N07Rik; Rpa12
Mus musculus	RefSeq	ILMN_185442	ILMN_185442	ZNRD1	NM_023162.3	NM_023162.3		66136	32129274	NM_023162.3	Znrd1	NP_075651.1	ILMN_2971486	001010332	S	458	GGACAGACGGTCTTCTATACCTGTATCAACTGCAAGTTTCAGGAAAAGGA	17	-	36562589-36562605:36565619-36565651	17qB1	Mus musculus zinc ribbon domain containing, 1 (Znrd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1110014N07Rik; Rpa12	1110014N07Rik; Rpa12
Mus musculus	MEEBO	ILMN_195146	ILMN_195146	9627947_63_RC	9627947_63_rc						9627947_63_rc		ILMN_1243732	005090482	S	9	GTCCAAAGTTACCAGCTTCTTCCACCCAAATTAAGTTCTTGTTGGTACAG										
Mus musculus	RefSeq	ILMN_223128	ILMN_223128	HLF	NM_172563.3	NM_172563.3		217082	124487342	NM_172563.3	Hlf	NP_766151.1	ILMN_2759687	000380736	S	3141	GAAATCTTTAATATTTTAAACCTATTACTGACACATCAGCATGTTTTCTG	11	-	90200323-90200372	11qC-qD	Mus musculus hepatic leukemia factor (Hlf), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	E230015K02Rik	E230015K02Rik
Mus musculus	RefSeq	ILMN_188337	ILMN_313498	LOC100038857	XM_001471626.1	XM_001471626.1		100038857	149268266	XM_001471626.1	LOC100038857	XP_001471676.1	ILMN_2451803	003290075	S	1722	GCAGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGA	17	+	7549751-7549800	17qA1	PREDICTED: Mus musculus hypothetical protein LOC100038857 (LOC100038857), mRNA.					
Mus musculus	RefSeq	ILMN_211899	ILMN_313498	LOC100038857	XM_001471626.1	XM_001471626.1		100038857	149268266	XM_001471626.1	LOC100038857	XP_001471676.1	ILMN_1251610	001570707	S	1519	GCGACTCACGATTCCCTTGACAATCCTGGAGATCCCCTGCACATGAGGAG	17	+	7549548-7549597	17qA1	PREDICTED: Mus musculus hypothetical protein LOC100038857 (LOC100038857), mRNA.					
Mus musculus	RefSeq	ILMN_222803	ILMN_313498	LOC100038857	XM_001471626.1	XM_001471626.1		100038857	149268266	XM_001471626.1	LOC100038857	XP_001471676.1	ILMN_1222330	002940711	S	1327	GGAATTCCCAGATGGCACCACCAAGACTGTGTATTGCAATGGCTGCCAGG	17	+	7549356-7549405	17qA1	PREDICTED: Mus musculus hypothetical protein LOC100038857 (LOC100038857), mRNA.					
Mus musculus	RefSeq	ILMN_198948	ILMN_198948	LOC333423	XM_286167.2	XM_286167.2			38090014	XM_286167.2	LOC333423		ILMN_2533496	003990048	S	112	GCTAGGTGGTCGGTCCATAGGCCATAATTTCACAGCCTGGGGAAAATGAA										
Mus musculus	RefSeq	ILMN_252096	ILMN_252096	RTN3	NM_001003930.1	NM_001003930.1		20168	51511738	NM_001003930.1	Rtn3	NP_001003930.1	ILMN_3081944	004250220	A	2606	GGGGTCTCCTAACAAGGGACCTCGTTCTGCACTGGAAGCCTCCACAGTTT	19	-	7500630-7500679	19qA	Mus musculus reticulon 3 (Rtn3), transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW558451; RTN3-A1; MGC105197	AW558451; RTN3-A1; MGC105197
Mus musculus	RefSeq	ILMN_201344	ILMN_201344	LOC382494	XM_356534.1	XM_356534.1			38091573	XM_356534.1	LOC382494		ILMN_1228972	000650632	S	273	GAGAGCTGGTCCACAAGAACAGAGAGATGCGTGGGTTGACAGAAAGAGCG										
Mus musculus	Riken	ILMN_202140	ILMN_202140	RXRB	ri|2900057G03|ZX00069E22|AK013718|939					AK013718	Rxrb		ILMN_2547313	001190703	S	775	AGCTTGGGATGACCCAGTAGCCCCGCCTGACCTGCCTCCCTTTTTGTCAA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The expansion of a cardiac muscle cell population by cell division [goid 60038] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]		
Mus musculus	RefSeq	ILMN_220863	ILMN_220863	AI894139	NM_178898.2	NM_178898.2		101197	31343501	NM_178898.2	AI894139	NP_849229.1	ILMN_2957944	004640184	S	2632	GGCCTGTGCTGTTTGCATCTGGGGCTGGGGTTACTGAAGGTCTGATTTCC	6	+	47894692-47894741	6qB2.3	Mus musculus expressed sequence AI894139 (AI894139), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190343	ILMN_190343	GALT	NM_016658.2	NM_016658.2		14430	120952694	NM_016658.2	Galt	NP_057867.2	ILMN_2711442	004180133	S	1073	AGACACTTCTGCTGCCCCGGCGGCACGTGCGGCGGCTACCTGAGCTGAAC	4	+	41704400-41704449	4qA5	Mus musculus galactose-1-phosphate uridyl transferase (Galt), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: UDP-glucose + alpha-D-galactose 1-phosphate = alpha-D-glucose 1-phosphate + UDP-galactose [goid 8108] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AW553376	AW553376
Mus musculus	RefSeq	ILMN_190343	ILMN_190343	GALT	NM_016658.2	NM_016658.2		14430	120952694	NM_016658.2	Galt	NP_057867.2	ILMN_2677567	004220053	S	1456	TGACTGTGACCACATCAGGGCCTTGAATCTTTGTACCTGACAGACCTGGG	4	+	41705454-41705456:41705457-41705503	4qA5	Mus musculus galactose-1-phosphate uridyl transferase (Galt), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: UDP-glucose + alpha-D-galactose 1-phosphate = alpha-D-glucose 1-phosphate + UDP-galactose [goid 8108] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AW553376	AW553376
Mus musculus	RefSeq	ILMN_226439	ILMN_226439	GIT2	NM_001077359.1	NM_001077359.1		26431	116517289	NM_001077359.1	Git2	NP_001070827.1	ILMN_3136809	007400132	A	4783	GTGCAGCATAGAGAAAAGAGCATTGCATACCTGGTGTTAAGCCCCCTCGC	5	-	115177528-115177577	5qF	Mus musculus G protein-coupled receptor kinase-interactor 2 (Git2), transcript variant 2, mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA0148; KIAA0148; B230104M05Rik; 5830420E16Rik; 9630056M03Rik; 1500036H07Rik	mKIAA0148; KIAA0148; B230104M05Rik; 5830420E16Rik; 9630056M03Rik; 1500036H07Rik
Mus musculus	Riken	ILMN_203149	ILMN_203149	6720426O10RIK	ri|6720426O10|PX00059E04|AK032746|2596					AK032746	6720426O10Rik		ILMN_1220692	006330403	S	2435	CTGGCTTGTCCATAGTTAGGATCCAGAAGGCTAAATGTTCCATGGGAGGC										
Mus musculus	Riken	ILMN_203511	ILMN_203511	8030472J01RIK	ri|8030472J01|PX00104A01|AK033238|4852					AK033238	8030472J01Rik		ILMN_1257351	001470438	S	2936	GTACTTTGCTCGGTTGCCATCCTAACCAGTGGCCAACAGCTCTAACACTG										
Mus musculus	Riken	ILMN_204558	ILMN_204558	B930010D08RIK	ri|B930010D08|PX00162N21|AK046997|1408					AK046997	B930010D08Rik		ILMN_1236243	004570022	S	1294	CACTGGGCCTCCGTTCATACAGACGGTAGCAAAGCCCCACATACAGTGGA										
Mus musculus	MEEBO	ILMN_185963	ILMN_185963	6330500D04RIK	scl00193385.1_22				51767587	XM_484234	6330500D04Rik		ILMN_2431483	001450097	S	9	GGGTAGAGATTCAGTCTCTTACAACGTGTGCAAGGAGTGGGGATGCCAAG								The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210464	ILMN_227425	BC061194	NM_001001334.2	NM_001001334.2		381350	110625691	NM_001001334.2	BC061194	NP_001001334.2	ILMN_1218886	001400500	S	222	GCAGACTGCTGCCTTGGCTCTGGGGAGGCTGGCCAACTACAACGATGACT	2	+	18632146-18632195	2qA3	Mus musculus cDNA sequence BC061194 (BC061194), mRNA.					
Mus musculus	RefSeq	ILMN_198043	ILMN_198043	LOC333637	XM_289711.2	XM_289711.2			38080888	XM_289711.2	LOC333637		ILMN_1222040	006510110	S	1509	CATGGGCAATTCTTTGACTTGGCTCTGGCGTAGAGTCGATTTGCTTTCTC										
Mus musculus	Riken	ILMN_205707	ILMN_205707	B430215E05RIK	ri|B430215E05|PX00071J08|AK046639|2194					AK046639	B430215E05Rik		ILMN_2574618	006650519	S	1523	GGCCGAGCCGCCATCCCTGGGTTAAGGTGTTTAAGGAGGAGTGAGTCCCT										
Mus musculus	Riken	ILMN_202093	ILMN_202093	ETL1	ri|2700069M11|ZX00063P14|AK012508|646					AK012508	Etl1		ILMN_1218171	002850735	S	150	GGAAGGAACATGACCTTTCTACCTGTGCCTCTGGTGTCACACATGTACTT										
Mus musculus	RefSeq	ILMN_235537	ILMN_235537	MFAP3	NM_180599.1	NM_180599.1		216760	84579901	NM_180599.1	Mfap3	NP_850930.1	ILMN_3095462	000670719	A	4697	TGTGACAACACTCAGCCTCGTGAAAATCTCTGGGTGCTTATGGCCCTGTC	11	+	57347188-57347237	11qB1.3	Mus musculus microfibrillar-associated protein 3 (Mfap3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			AW536327; 2700079M14Rik; RP23-206L21.3; 2610509F16Rik	AW536327; 2700079M14Rik; RP23-206L21.3; 2610509F16Rik
Mus musculus	RefSeq	ILMN_223121	ILMN_223121	ADI1	NM_134052.2	NM_134052.2		104923	118129921	NM_134052.2	Adi1	NP_598813.1	ILMN_3065603	007210202	I	190	CGATCCAGAACTGGAAAAGATCCGGAAAATGAGAAACTACTCCTGGATGG	12	+	29362666-29362715	12qA2	Mus musculus acireductone dioxygenase 1 (Adi1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The generation of L-methionine (2-amino-4-(methylthio)butanoic acid) from methylthioadenosine [goid 19509] [evidence IEA]	Interacting selectively with nickel (Ni) ions [goid 16151] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the incorporation of both atoms of oxygen from one molecule of O2 into the (reduced) substrate [goid 51213] [evidence IEA]	AL024210	AL024210
Mus musculus	RefSeq	ILMN_223121	ILMN_223121	ADI1	NM_134052.2	NM_134052.2		104923	118129921	NM_134052.2	Adi1	NP_598813.1	ILMN_3143557	006420561	A	872	CTCCCAGATCTTTAGGTGTCTGTTGGTGTGAAGCTATGCCTCCTGCAAGA	12	+	29366236-29366285	12qA2	Mus musculus acireductone dioxygenase 1 (Adi1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The generation of L-methionine (2-amino-4-(methylthio)butanoic acid) from methylthioadenosine [goid 19509] [evidence IEA]	Interacting selectively with nickel (Ni) ions [goid 16151] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the incorporation of both atoms of oxygen from one molecule of O2 into the (reduced) substrate [goid 51213] [evidence IEA]	AL024210	AL024210
Mus musculus	RefSeq	ILMN_184846	ILMN_234837	CLCNKB	NM_019701.1	NM_019701.1		56365	9789908	NM_019701.1	Clcnkb	NP_062675.1	ILMN_2757283	002570086	S	2274	GTTGTGACCCTTGTGACTTCTGGGGTTGCCTGCTGCTAACCAGGAGCTTC	4	-	140960281-140960330	4qE1	Mus musculus chloride channel Kb (Clcnkb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CLCKB; Clc-Ka; Clcnk1l; Clck2	CLCKB; Clc-Ka; Clcnk1l; Clck2
Mus musculus	Riken	ILMN_202387	ILMN_202387	4930546G22RIK	ri|4930546G22|PX00034P12|AK016051|518					AK016051	4930546G22Rik		ILMN_2549225	000520482	S	424	TCTAGGGAAGCCTACATCGCGGGACCTTCCTGAACCTGTCCCTCACCTTT										
Mus musculus	RefSeq	ILMN_211173	ILMN_211173	KCNJ16	NM_010604.3	NM_010604.3		16517	130505928	NM_010604.3	Kcnj16	NP_034734.3	ILMN_2613284	007100082	S	3430	CCTATGACAAGATCAGAATGGGGTGGCGGTGGTCAGGGATCACAGGTCTC	11	+	110889089-110889138	11qE2	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 16 (Kcnj16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]	6430410F18Rik; AI132396; Kir5.1	6430410F18Rik; AI132396; Kir5.1
Mus musculus	MEEBO	ILMN_218877	ILMN_218877	2410016F01RIK	scl40177.4_172	NM_022423.1			29789133	NM_022423.1	2410016F01Rik		ILMN_2701339	003890259	S	1693	AGGTGAATTTCACAAAACTTGTGACGTAGCGGTAGTGTGGTTGCCTGCAG										
Mus musculus	RefSeq	ILMN_229047	ILMN_229047	ENSMUSG00000073257	NM_009529.2	NM_009529.2		22526	50355988	NM_009529.2	ENSMUSG00000073257	NP_033555.1	ILMN_3083227	002650497	A	407	GTAGAGACACCAATGGAAAACTGGAATTTGTTAAGTGGTGAACAGCAAGT	X	-	27586676-27586725	XqA3.1	Mus musculus predicted gene, ENSMUSG00000073257 (ENSMUSG00000073257), mRNA.				RP23-418H15.1; MGC118207; RP23-110D11.1; MGC107294	RP23-418H15.1; MGC118207; RP23-110D11.1; MGC107294
Mus musculus	RefSeq	ILMN_209181	ILMN_209181	OTTMUSG00000016703	NM_177843.3	NM_177843.3		329436	141801501	NM_177843.3	OTTMUSG00000016703	NP_808511.1	ILMN_2593313	000780528	S	1695	GGTTTTCCTTAAGCTATGGATGAGAATTGAGTTACTAGGGCATTCAGCAA	2	+	78142302-78142351	2qC3	Mus musculus predicted gene, OTTMUSG00000016703 (OTTMUSG00000016703), mRNA.				A830093M07; RP23-271B13.1	A830093M07; RP23-271B13.1
Mus musculus	RefSeq	ILMN_216572	ILMN_216572	TEX13	NM_031381.2	NM_031381.2		83555	24475713	NM_031381.2	Tex13	NP_113558.1	ILMN_2850784	002760441	S	1674	CATTGCAACCTGCAGGAAAGCTCATGAAGACTCAGTAGTAGAAACGAGCC	X	-	137343238-137343287	XqF1	Mus musculus testis expressed gene 13 (Tex13), mRNA.				4933403J23Rik	4933403J23Rik
Mus musculus	RefSeq	ILMN_216572	ILMN_216572	TEX13	NM_031381.2	NM_031381.2		83555	24475713	NM_031381.2	Tex13	NP_113558.1	ILMN_1258183	003130424	S	1514	GTACAGGAAGCGCCATGGATCCTACAGTGTTAGTTTGTCAGCTAGCCAAC	X	-	137343398-137343447	XqF1	Mus musculus testis expressed gene 13 (Tex13), mRNA.				4933403J23Rik	4933403J23Rik
Mus musculus	MEEBO	ILMN_216204	ILMN_216204	D630030L16RIK	scl0101344.2_12				47887033	NM_201234	D630030L16Rik		ILMN_2668432	005910730	S	1203	CCTGTACCTCTGTTGGACGGTGACCCAGCAGGCTGGGTTTCTTGGTATAC										
Mus musculus	MEEBO	ILMN_219537	ILMN_219537	MGC41689	scl0211623.4_18				46402208	NM_207229	MGC41689		ILMN_2710159	001400546	S	43	CGCCCTGCTCCGTGCCGGGACGGGCGAATGGGGCCAAGGTCCCAGGGACA										
Mus musculus	RefSeq	ILMN_196014	ILMN_256627	MTMR10	NM_172742.2	NM_172742.2		233315	124028522	NM_172742.2	Mtmr10	NP_766330.2	ILMN_1245846	006420136	S	4885	CCTTCATTCGTCTCTTTTGAAAACTCTCTAAGGTGGGGTGGACTAACAGC	7	+	71485372-71485421	7qC	Mus musculus myotubularin related protein 10 (Mtmr10), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	Mtmr10; BB128963; C79734	Mtmr10; BB128963; C79734
Mus musculus	RefSeq	ILMN_239901	ILMN_239901	EXT2	NM_010163.1	NM_010163.1		14043	6753789	NM_010163.1	Ext2	NP_034293.1	ILMN_2895364	005890435	S	2735	GAGTCATGAGCCCAGATCCACAGCAGAGCACAGGCTGCCAAGATGTCTAC	2	-	93496533-93496582	2qE1	Mus musculus exostoses (multiple) 2 (Ext2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence IEA]; Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50509] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + heparan sulfate = UDP + (N-acetyl-D-glucosaminyl)-heparan sulfate [goid 42328] [evidence IC ]	AI893565	AI893565
Mus musculus	RefSeq	ILMN_219113	ILMN_219113	CELSR1	NM_009886.2	NM_009886.2		12614	115648152	NM_009886.2	Celsr1	NP_034016.2	ILMN_1235423	001710181	S	10675	CACGCCACCTCAGAAGGTGAAGTTTTTGATTCGATCACAACTATTAGCAA	15	-	85729513-85729562	15qE2	Mus musculus cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila) (Celsr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence NAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The specification and formation of a polarized embryonic epithelial sheet [goid 42249] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence NAS]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence NAS]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence NAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence TAS]	Crsh; Scy	Crsh; Scy
Mus musculus	Riken	ILMN_205092	ILMN_205092	RPO1-2	ri|D630020H17|PX00197M07|AK052672|2770					AK052672	Rpo1-2		ILMN_1257957	002360047	S	2333	GTGTCTAACTAGAAGGCAGGGCTTGTAAAGTACAGTTTCCCTGTCCAGTG										
Mus musculus	MEEBO	ILMN_222064	ILMN_222064	FUT1	scl014343.2_310	NM_008051.1			6679874	NM_008051.1	Fut1		ILMN_2777013	006510114	S	1042	CCTGAGTGGGTGGGCATCAATGCAGACTTGTCCCCGCTGCAGGCTCAATT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-R = GDP + alpha-L-fucosyl-(1,2)-beta-D-galactosyl-R [goid 8107] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195967	ILMN_230967	2700045P11RIK	XM_980231.1	XM_980231.1		72555	94400057	XM_980231.1	2700045P11Rik	XP_985325.1	ILMN_2520374	003930709	S	14	TAGAGAGGTGAAGAGCATCCTGCGAGCGAGCGGACGTGGGGAGCCGAGTC	16	+	11897739-11897788	16qA1	PREDICTED: Mus musculus RIKEN cDNA 2700045P11 gene, transcript variant 1 (2700045P11Rik), mRNA.					
Mus musculus	Riken	ILMN_206364	ILMN_206364	SLIT2	ri|D230018J08|PX00188L03|AK084293|2493					AK084293	Slit2		ILMN_1242129	000270373	S	2374	CTGGGGCAAGGGAGGTGTGCCCGCGTTTCCCAGACTGCAAAGCCAGGAGT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IGI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]		
Mus musculus	RefSeq	ILMN_215093	ILMN_215093	ZFP12	NM_177681.3	NM_177681.3		231866	113866020	NM_177681.3	Zfp12	NP_808349.1	ILMN_2655429	002060192	S	3884	GCCTTAGTGAACATAACCTTGTCTGGATGCGGTGCCTGATGATGACTGCC	5	+	144009262-144009311	5qG2	Mus musculus zinc finger protein 12 (Zfp12), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Zfp-12; C530015C18; Krox-7	Zfp-12; C530015C18; Krox-7
Mus musculus	RefSeq	ILMN_196502	ILMN_196502	4930555L11RIK	XM_284250.2	XM_284250.2			38085428	XM_284250.2	4930555L11Rik		ILMN_2524553	002480184	S	1498	TAGGTGCTTAGTCCAAGCCATGTCACCACGACTGTGACACACAGCCTCCC										
Mus musculus	RefSeq	ILMN_196502	ILMN_196502	4930555L11RIK	XM_284250.2	XM_284250.2			38085428	XM_284250.2	4930555L11Rik		ILMN_1254836	004640538	S	1699	GCCTCCATTCTCTGCCACTGCTGGGATTAAGGGAGCGCACGGTCACATCT										
Mus musculus	MEEBO	ILMN_187812	ILMN_187812	6030413G23RIK	scl39201.13_473				31341002	NM_178664	6030413G23Rik		ILMN_1227785	001690538	S	1	GCTGGCCCCAGGGTAATCAGGGACAGAAGAACAGAGCTGTGAAACAAGTT										
Mus musculus	RefSeq	ILMN_221065	ILMN_221065	POF1B	NM_181579.1	NM_181579.1		69693	31657131	NM_181579.1	Pof1b	NP_853557.1	ILMN_1242912	006620368	S	3692	ACCTGCTATTAGGGTGCTTCCTATGTTCATCAATTCTGTGTAGTTACTCA	X	-	109752184-109752233	XqE1	Mus musculus premature ovarian failure 1B (Pof1b), mRNA.			Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	2310066B14Rik	2310066B14Rik
Mus musculus	RefSeq	ILMN_223621	ILMN_223621	MAFB	NM_010658.2	NM_010658.2		16658	31543225	NM_010658.2	Mafb	NP_034788.1	ILMN_2766651	006060403	S	3188	AATAAGGGATCAATTTCAACCCCCTGCTTATGATATGAAAATATTAAAAT	2	-	160189513-160189562	2qH2	Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) (Mafb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Division of the brain into a series of semi-repetitive parts or segments [goid 35284] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21571] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 6 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21572] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	Krml; kr; Kreisler; Krml1	Krml; kr; Kreisler; Krml1
Mus musculus	RefSeq	ILMN_187811	ILMN_230320	2010001A14RIK	XM_993230.1	XM_993230.1		76516	94390097	XM_993230.1	2010001A14Rik	XP_998324.1	ILMN_1251423	004640296	S	133	CTCGCTCCGCGAGGGATGCTGAACGGGGTCTGGAAGAATGCAAGATGTCC	11	-	57617446-57617459:57617460-57617495		PREDICTED: Mus musculus RIKEN cDNA 2010001A14 gene (2010001A14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_189362	ILMN_189362	WBSCR16	NM_033572.1	NM_033572.1		94254	15809009	NM_033572.1	Wbscr16	NP_291050.1	ILMN_1222872	005090189	S	2184	GGAGGCCTCAGAAACTGGGAAATACTTGTTTTTAGGGAAGCTTGCCCTTT	5	-	134631752-134631783:134633457-134633474	5qG2	Mus musculus Williams-Beuren syndrome chromosome region 16 homolog (human) (Wbscr16), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase of the Ran family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5087] [evidence NAS]	AU019812; 5730496C04Rik	AU019812; 5730496C04Rik
Mus musculus	MEEBO	ILMN_210559	ILMN_210559	BC011468	scl47050.3.1_31	XM_354921.1			38077812	XM_354921.1	BC011468		ILMN_2606835	003170196	S	420	CCATCCCAACATCGTCAAGCTGCACAAGTATTGGCTGGACGCCTCTGAGG										
Mus musculus	Riken	ILMN_204061	ILMN_204061	A630059M15RIK	ri|A630059M15|PX00146C18|AK042118|1458					AK042118	A630059M15Rik		ILMN_2562063	006450408	S	969	GCAGAGTAATGCCCTCAATGGACCTACGTTTTTCACCCATCTGCTCCATG										
Mus musculus	RefSeq	ILMN_185491	ILMN_248075	PPAPDC2	NM_028922.2	NM_028922.2		74411	142361366	NM_028922.2	Ppapdc2	NP_083198.1	ILMN_2427467	000610451	S	2644	CCCAAGTCTGCTAATTAAGGGCCCACTTCTACTTTCTAGTCGCACTTCTG	19	+	29041053-29041102	19qC1	Mus musculus phosphatidic acid phosphatase type 2 domain containing 2 (Ppapdc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	4932443D16Rik	4932443D16Rik
Mus musculus	RefSeq	ILMN_205159	ILMN_248075	PPAPDC2	NM_028922.2	NM_028922.2		74411	142361366	NM_028922.2	Ppapdc2	NP_083198.1	ILMN_1254167	002340474	S	1084	CTTGACAGGTTCCTAGACCGGAGCGCATGCTGGCTATTACTGAACACGGC	19	+	29039493-29039542	19qC1	Mus musculus phosphatidic acid phosphatase type 2 domain containing 2 (Ppapdc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	4932443D16Rik	4932443D16Rik
Mus musculus	RefSeq	ILMN_212703	ILMN_212703	PSG21	NM_027403.2	NM_027403.2		72242	22758147	NM_027403.2	Psg21	NP_081679.2	ILMN_2809021	007150487	S	1818	TCCCCCCTTCTACTTTAGATTCAAGCATACACCCTTGGCCTTCCAAATTG	7	-	17805464-17805513	7qA3	Mus musculus pregnancy-specific glycoprotein 21 (Psg21), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		1600026N13Rik; 1600025N01Rik; cea8; 1600019C01Rik	1600026N13Rik; 1600025N01Rik; cea8; 1600019C01Rik
Mus musculus	RefSeq	ILMN_216008	ILMN_216008	4933403G14RIK	NM_028908.2	NM_028908.2		74393	141801814	NM_028908.2	4933403G14Rik	NP_083184.1	ILMN_2666297	004040678	S	3032	GTGTTAGAGCTTGAGACCCCAAAATGTATTTGTGATCTACCCCTGCCGCT	8	+	128196797-128196846	8qE2	Mus musculus RIKEN cDNA 4933403G14 gene (4933403G14Rik), mRNA.				KIAA1383; AI835009; mKIAA1383	KIAA1383; AI835009; mKIAA1383
Mus musculus	RefSeq	ILMN_209245	ILMN_209245	POLR3H	NM_030229.2	NM_030229.2		78929	27229270	NM_030229.2	Polr3h	NP_084505.2	ILMN_2654466	006130008	S	2205	GTGCCTACTCTCAAGGTAAAGACCAGGTCTAGTACTGTAGCCCCGGGGGA	15	-	81742544-81742593	15qE1	Mus musculus polymerase (RNA) III (DNA directed) polypeptide H (Polr3h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	RPC8; 5031409G22Rik	RPC8; 5031409G22Rik
Mus musculus	RefSeq	ILMN_209245	ILMN_209245	POLR3H	NM_030229.2	NM_030229.2		78929	27229270	NM_030229.2	Polr3h	NP_084505.2	ILMN_2939022	006370750	S	2267	AGCTCTTGGTCTCTGAAGCTCCCCTCTACTGCAGGTACTTGTGACCAGGG	15	-	81742482-81742531	15qE1	Mus musculus polymerase (RNA) III (DNA directed) polypeptide H (Polr3h), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	RPC8; 5031409G22Rik	RPC8; 5031409G22Rik
Mus musculus	Riken	ILMN_203088	ILMN_203088	A530012E19RIK	ri|A530012E19|PX00139P13|AK040670|789					AK040670	A530012E19Rik		ILMN_2554644	005420092	S	563	CTGAAATCAGCCCTTGGAAGGTTGTCCAATAGATCCTTGTATGGACCAGG										
Mus musculus	RefSeq	ILMN_212257	ILMN_212257	CLDN15	NM_021719.1	NM_021719.1		60363	14149747	NM_021719.1	Cldn15	NP_068365.1	ILMN_2793817	006420594	S	1642	GGGGGAGTCACTAACAACTGATCTGAGTCACCCACCTCAGGAGATTGCTA	5	+	137260263-137260312	5qG2	Mus musculus claudin 15 (Cldn15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	BB107105; 2210009B08Rik	BB107105; 2210009B08Rik
Mus musculus	Riken	ILMN_205216	ILMN_205216	E130309L16RIK	ri|E130309L16|PX00208H04|AK053808|811					AK053808	E130309L16Rik		ILMN_2570875	002600129	S	493	AGGAGGCGAGCCTGACATTGTGTGAAGGTCAACAGGCCGGAGCAGTTCAC										
Mus musculus	RefSeq	ILMN_189866	ILMN_231231	IL17RA	NM_008359.1	NM_008359.1		16172	6680410	NM_008359.1	Il17ra	NP_032385.1	ILMN_2655024	002940433	S	2995	GTACTGATCCCTAAACACACCCCTTTCCCTGATAACCCGACATGAGCATC	6	+	120426997-120427046	6qF1	Mus musculus interleukin 17 receptor A (Il17ra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Il17r; VDw217; AW538159; Cdw217	Il17r; VDw217; AW538159; Cdw217
Mus musculus	RefSeq	ILMN_198063	ILMN_198063	LOC231822	XM_144624.4	XM_144624.4			38081361	XM_144624.4	LOC231822		ILMN_2530362	004780307	S	1241	CCCCAAGCCAGTTCAACCCAAACCACTTTCTGGACGCGAAGGGGCGCTTT										
Mus musculus	Riken	ILMN_202587	ILMN_202587	A430024H01RIK	ri|A430024H01|PX00093H17|AK020747|1066					AK020747	A430024H01Rik		ILMN_2550740	002710021	S	930	TGCAGCTTCTCTGCTGGCTGCGACGACAGTGGGGCTCAGCTCTGCTTACA										
Mus musculus	RefSeq	ILMN_196626	ILMN_196626	D030049F17	XM_355199.1	XM_355199.1			38049498	XM_355199.1	D030049F17		ILMN_2525074	006200450	S	2237	TCAGCCCAGAGTTCTTCACCGTGCTGCATTCTAACCCTAGTGCCTACCGC										
Mus musculus	RefSeq	ILMN_186894	ILMN_322458	LOC670356	XM_001476496.1	XM_001476496.1		670356	149263641	XM_001476496.1	LOC670356	XP_001476546.1	ILMN_2439411	001690082	S	349	CTGTGTGGCCTTTTACTTCTACTATAATGAGACTAATTCGTTCTGGTTTG					PREDICTED: Mus musculus hypothetical LOC670356 (LOC670356), mRNA.					
Mus musculus	MEEBO	ILMN_193467	ILMN_193467	D430007A19RIK	scl51410.1.1_192						D430007A19Rik		ILMN_2497455	003780035	S	19	AGGTGGTGGCAGATGAGGCTGTTGGTAATGACATTTGGGAGAAGTGGCAG										
Mus musculus	MEEBO	ILMN_221263	ILMN_221263	ADIPOR2	scl28480.7_231	NM_197985.2			39841015	NM_197985.2	Adipor2		ILMN_1260219	001570328	S	3836	GGGGATCATAGAAGGTTGGGGTTCCAGAAAGGCATCTCTGTGATGGTTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The removal of one or more electrons from a fatty acid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen [goid 19395] [evidence ISS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence ISS]	Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with any hormone, naturally occurring substances secreted by specialized cells that affect the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42562] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]		
Mus musculus	Riken	ILMN_203612	ILMN_203612	A930014D06RIK	ri|A930014D06|PX00066O12|AK044457|2732					AK044457	A930014D06Rik		ILMN_1221974	005490523	S	2520	GTCTGTCTGCAACCCCTACTGAGGCCATCACATTCTCAGCTCTGTATCAG										
Mus musculus	RefSeq	ILMN_196003	ILMN_243239	HEATR5B	NM_001081179.1	NM_001081179.1		320473	124487156	NM_001081179.1	Heatr5b	NP_001074648.1	ILMN_2625626	007650762	S	2432	CTCAGTGATTGACGCATCTGTGGCTCTGTTCGGGGTTGTGTTTCCACATG	17	-	79212450-79212499	17qE3	Mus musculus HEAT repeat containing 5B (Heatr5b), mRNA.				2010013B10Rik; KIAA1414; MGC77977; mKIAA1414; AV071430; A230048G03Rik; D330050P16Rik	2010013B10Rik; KIAA1414; MGC77977; mKIAA1414; AV071430; A230048G03Rik; D330050P16Rik
Mus musculus	RefSeq	ILMN_196003	ILMN_243239	HEATR5B	NM_001081179.1	NM_001081179.1		320473	124487156	NM_001081179.1	Heatr5b	NP_001074648.1	ILMN_1223865	006580520	S	3596	CTCTGATATTCACGACACGTTGGGGCACATGCTCTCTTCACTGGCCGTTG	17	-	79195215-79195264	17qE3	Mus musculus HEAT repeat containing 5B (Heatr5b), mRNA.				2010013B10Rik; KIAA1414; MGC77977; mKIAA1414; AV071430; A230048G03Rik; D330050P16Rik	2010013B10Rik; KIAA1414; MGC77977; mKIAA1414; AV071430; A230048G03Rik; D330050P16Rik
Mus musculus	RefSeq	ILMN_209988	ILMN_243239	HEATR5B	NM_001081179.1	NM_001081179.1		320473	124487156	NM_001081179.1	Heatr5b	NP_001074648.1	ILMN_2601111	004730301	S	6352	CATTTACCACTTTTTAGAATAATACCAACATTCACATACTGTATTACAAT	17	-	79152281-79152330	17qE3	Mus musculus HEAT repeat containing 5B (Heatr5b), mRNA.				2010013B10Rik; KIAA1414; MGC77977; mKIAA1414; AV071430; A230048G03Rik; D330050P16Rik	2010013B10Rik; KIAA1414; MGC77977; mKIAA1414; AV071430; A230048G03Rik; D330050P16Rik
Mus musculus	RefSeq	ILMN_223055	ILMN_223055	MAL2	NM_178920.3	NM_178920.3		105853	142388069	NM_178920.3	Mal2	NP_849251.1	ILMN_1252628	006350255	S	2507	GCGATGAAGCACTTGAACAAAGACGAAGGTGTTTAAGAATCTCTCTACGT	15	+	54434252-54434301	15qD1	Mus musculus mal, T-cell differentiation protein 2 (Mal2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			MGC130604; AI461653	MGC130604; AI461653
Mus musculus	RefSeq	ILMN_193533	ILMN_233966	TBL1X	NM_020601.2	NM_020601.2		21372	142348182	NM_020601.2	Tbl1x	NP_065626.1	ILMN_2674890	006760114	S	2007	TATGGTTTCCACCTAGAATGCTCAGCTGGGGAAGGATGAAGCCATCAGCT	X	+	74905309-74905358	XqA7.3	Mus musculus transducin (beta)-like 1 X-linked (Tbl1x), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Tbl1; 5330429M20	Tbl1; 5330429M20
Mus musculus	MEEBO	ILMN_185196	ILMN_185196	C030014I23RIK	scl35951.1.26_288						C030014I23Rik		ILMN_2424983	000020598	S	10	GTCTTGGAGGAATACTGACCTTAAGGGTTGTTTTTACTGTCCCCTAGTGG										
Mus musculus	Riken	ILMN_206335	ILMN_206335	STK18	ri|D330030K03|PX00192F01|AK084692|1583					AK084692	Stk18		ILMN_1220863	004050243	S	1503	GCACTGGACATACTGGGAATGTACTCTGTTAGGTCGAGGGCAGAGCACAG										
Mus musculus	RefSeq	ILMN_219437	ILMN_219437	F7	NM_010172.2	NM_010172.2		14068	141802834	NM_010172.2	F7	NP_034302.1	ILMN_2708871	006860274	S	1236	GCTGTGCAGCTATTGGTCACATTGGGGTGTACACCAGGGTCTCCCAGTAC	8	+	13035198-13035247	8qA1.1	Mus musculus coagulation factor VII (F7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	FVII; mfVII; AI132620; Cf7	FVII; mfVII; AI132620; Cf7
Mus musculus	MEEBO	ILMN_194874	ILMN_194874	SCL0003608.1_34	scl0003608.1_34	AK033867.1			26329520	AK033867.1	scl0003608.1_34		ILMN_2510418	002630482	S	6	GCCCAAATCAGTCCCCCAATGTTCTTGCCTTCTGCCCAAGTTTCATACCC										
Mus musculus	RefSeq	ILMN_220661	ILMN_220661	CNPY3	NM_028065.2	NM_028065.2		72029	31982623	NM_028065.2	Cnpy3	NP_082341.1	ILMN_1244634	003610689	S	280	GGAAACGGGAAAGACCAAGGAAGTGATTGACACCGGCTATGGCATCCTGG	17	-	46884392-46884441	17qC	Mus musculus canopy 3 homolog (zebrafish) (Cnpy3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]	2410050O22Rik; CAG4A; 1600025D17Rik; ERDA5; AI413153	2410050O22Rik; CAG4A; 1600025D17Rik; ERDA5; AI413153
Mus musculus	RefSeq	ILMN_195197	ILMN_224493	EXOC1	XM_973520.1	XM_973520.1		69940	94376395	XM_973520.1	Exoc1	XP_978614.1	ILMN_2513422	006760224	S	3755	CTGCCCTCTAGTGGTTAATATGGAGTCACATCTGATAGTTGAGCATCTCC				5qC3.3	PREDICTED: Mus musculus exocyst complex component 1, transcript variant 2 (Exoc1), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_203535	ILMN_224493	EXOC1	XM_973520.1	XM_973520.1		69940	94376395	XM_973520.1	Exoc1	XP_978614.1	ILMN_1238955	003990553	S	2197	GTGCCTAGACTGTGGGTGTGCTGAGGACGTGACCCCTTAGTAGTGTGTGG				5qC3.3	PREDICTED: Mus musculus exocyst complex component 1, transcript variant 2 (Exoc1), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_219117	ILMN_219117	4930572J05RIK	NM_198607.1	NM_198607.1		223626	38348459	NM_198607.1	4930572J05Rik	NP_941009.1	ILMN_3065373	000450180	I	1399	CACGCTGCTATGCTTGCCTTAGTGCTGTCAAGGGGAAAGCTGCAACCCGT	15	+	74554714-74554763	15qD3	Mus musculus RIKEN cDNA 4930572J05 gene (4930572J05Rik), mRNA.				MGC54796	MGC54796
Mus musculus	RefSeq	ILMN_219117	ILMN_219117	4930572J05RIK	NM_198607.1	NM_198607.1		223626	38348459	NM_198607.1	4930572J05Rik	NP_941009.1	ILMN_2704496	002850725	S	1027	ACTCAGGGACAGTGGGCCATCTGGAGGGTCACCTCATAGCAGGGAAGCAA	15	+	74554342-74554391	15qD3	Mus musculus RIKEN cDNA 4930572J05 gene (4930572J05Rik), mRNA.				MGC54796	MGC54796
Mus musculus	RefSeq	ILMN_219117	ILMN_219117	4930572J05RIK	NM_198607.1	NM_198607.1		223626	38348459	NM_198607.1	4930572J05Rik	NP_941009.1	ILMN_3143304	002450068	A	1289	CTCCCTCTCTGGGAACCACACCTGGAGCCAGAGCCCAAAGCTTCAGTGAT	15	+	74554604-74554653	15qD3	Mus musculus RIKEN cDNA 4930572J05 gene (4930572J05Rik), mRNA.				MGC54796	MGC54796
Mus musculus	RefSeq	ILMN_184338	ILMN_184338	VIPR1	NM_011703.2	NM_011703.2		22354	31543947	NM_011703.2	Vipr1	NP_035833.2	ILMN_2990456	006860326	S	2237	GCATGAGCACACAGGCCCCTTGATCCTGGGCCACCCTGATATCACTGGTA	9	+	121518987-121519036	9qF4	Mus musculus vasoactive intestinal peptide receptor 1 (Vipr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4999] [evidence IEA]	VPAC1; VIP-R1	VPAC1; VIP-R1
Mus musculus	RefSeq	ILMN_184338	ILMN_184338	VIPR1	NM_011703.2	NM_011703.2		22354	31543947	NM_011703.2	Vipr1	NP_035833.2	ILMN_1247834	005420278	S	16	GTACCTGCAGATGATTGAGAAACAGCGTCAGCAGTGCCTGGAGGAGGCCC	9	+	121491429-121491478	9qF4	Mus musculus vasoactive intestinal peptide receptor 1 (Vipr1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4999] [evidence IEA]	VPAC1; VIP-R1	VPAC1; VIP-R1
Mus musculus	RefSeq	ILMN_215205	ILMN_215205	DARC	NM_010045.2	NM_010045.2		13349	130502089	NM_010045.2	Darc	NP_034175.2	ILMN_2656748	007000746	S	948	TGTGACAGAAGCCCTGAGTATGCTGCACTGTGTGGCTACCCCACTGCTCC	1	-	175262177-175262226	1qH3	Mus musculus Duffy blood group, chemokine receptor (Darc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	FY; Dfy; ESTM35; AA162249; CCBP1; GPD; CD234	FY; Dfy; ESTM35; AA162249; CCBP1; GPD; CD234
Mus musculus	MEEBO	ILMN_211597	ILMN_211597	8030476J24	scl55003.5.1_155	NM_177745.2			31343142	NM_177745.2	8030476J24		ILMN_2617477	005720411	S	2743	CCCAACTAAATGGTCGAATATTGTACTGCCCCTGTGTTTGAAAGGCGCTC										
Mus musculus	RefSeq	ILMN_186459	ILMN_229039	NRXN3	NM_172544.2	NM_172544.2		18191	142353846	NM_172544.2	Nrxn3	NP_766132.1	ILMN_2640909	000110543	S	1753	GCAGATACACTGCGTCTAGAGTTGGATGGTGGGCGTGTCAAGCTCATGGT	12	+	90586836-90586885	12qD3	Mus musculus neurexin III (Nrxn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence ISA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; The biosynthesis of a synapse [goid 7416] [evidence IGI]	 [goid 5246] [evidence IGI]	9330112C09Rik; 4933401A11Rik; D12Bwg0831e; 6332407J11	9330112C09Rik; 4933401A11Rik; D12Bwg0831e; 6332407J11
Mus musculus	RefSeq	ILMN_186459	ILMN_229039	NRXN3	NM_172544.2	NM_172544.2		18191	142353846	NM_172544.2	Nrxn3	NP_766132.1	ILMN_2763404	000130156	S	4524	CCTTATCTGGTTCTGACCAGTGTGTGTGTAACTTTCCAAGATCTGAGGGG	12	+	91571390-91571439	12qD3	Mus musculus neurexin III (Nrxn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence ISA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IGI]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]; The biosynthesis of a synapse [goid 7416] [evidence IGI]	 [goid 5246] [evidence IGI]	9330112C09Rik; 4933401A11Rik; D12Bwg0831e; 6332407J11	9330112C09Rik; 4933401A11Rik; D12Bwg0831e; 6332407J11
Mus musculus	MEEBO	ILMN_185923	ILMN_185923	EEF2K	scl32114.1_221				31560707	NM_007908	Eef2k		ILMN_2431150	000070427	S	14	GGATTTGTGCCTCTTCCTTAACGTTTTGTCTCTGACCTCAAGGCAACTGG							The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the phosphorylation of eukaryotic elongation factor-2 [goid 4686] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219887	ILMN_219887	TAS1R2	NM_031873.1	NM_031873.1		83770	13994202	NM_031873.1	Tas1r2	NP_114079.1	ILMN_2714817	003190128	S	2964	GACTGGGACTCCTGTGTTCTAATGGTCAGATGAGCATCATGGGTCCTCCA	4	+	139226112-139226161	4qD3	Mus musculus taste receptor, type 1, member 2 (Tas1r2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Gpr71; T1r2; TR2	Gpr71; T1r2; TR2
Mus musculus	RefSeq	ILMN_223617	ILMN_223617	GMDS	NM_146041.2	NM_146041.2		218138	133892142	NM_146041.2	Gmds	NP_666153.1	ILMN_2766596	004850685	S	1306	GAGGTTTGTAGAGCCTGGGACAGGACACACCAGAGCTAAGGCCGCATTGC	13	-	31911609-31911658	13qA3.2	Mus musculus GDP-mannose 4, 6-dehydratase (Gmds), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate [goid 19673] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: GDP-mannose = GDP-4-dehydro-6-deoxy-D-mannose + H2O [goid 8446] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C87208; BC031788; MGC18773; MGC103045	C87208; BC031788; MGC18773; MGC103045
Mus musculus	RefSeq	ILMN_212492	ILMN_246938	OLFR27	NM_146829.2	NM_146829.2		258826	126215541	NM_146829.2	Olfr27	NP_667040.2	ILMN_2627060	004010270	S	636	CCTCTAATACGTTTATCATTGAAATATTGATTCTAGTTATTGCTACACTG	9	+	38952252-38952301	9qA5.1	Mus musculus olfactory receptor 27 (Olfr27), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MTPCR56; MOR171-6	MTPCR56; MOR171-6
Mus musculus	MEEBO	ILMN_188114	ILMN_188114	QARS	scl36465.19_101				51765127	XM_486261	Qars		ILMN_1251314	007510612	S	13	AGTAGCAGGCAAGCTTAGAGTTTGTCATAATCCTCATGAAACTAAGGCAC						A multienzyme complex found in all multicellular eukaryotes composed of eight proteins with aminoacyl-tRNA synthetase activities (abbreviated as: ArgRS, AspRS, GluProRS, GlnRS, IleRS, LeuRS, LysRS, MetRS where RS is the enzyme, preceded by the amino acid it uses as a substrate) as well as three non-synthetase proteins (p43, p38, and p18) with diverse functions. Several of these subunits are known dimers, so the total polypeptide count in the multisynthetase complex is at least fifteen. All of the enzymes in this assembly catalyze the same reaction, the covalent attachment of an amino acid to either the 2'- or 3'-hydroxyl of the 3'-terminal adenosine of tRNA, but using different substrates [goid 17101] [evidence ISO]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISO]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISO]; Catalysis of the reaction: ATP + L-glutamine + tRNA(Gln) = AMP + diphosphate + L-glutaminyl-tRNA(Gln) [goid 4819] [evidence ISO]		
Mus musculus	RefSeq	ILMN_215421	ILMN_215421	GPRC5C	NM_147217.2	NM_147217.2		70355	142354065	NM_147217.2	Gprc5c	NP_671750.1	ILMN_2659269	001660020	S	1799	CTGTTTCATGCCAGGGCCACCTCTGGTGATCTAACTCTATCCAAATAGCG	11	+	114730214-114730263	11qE2	Mus musculus G protein-coupled receptor, family C, group 5, member C (Gprc5c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with the sevenless (sev) protein, a receptor tyrosine kinase [goid 5118] [evidence IEA]	3200002M13Rik; 1110028I06Rik; MGC6786; MGC11976	3200002M13Rik; 1110028I06Rik; MGC6786; MGC11976
Mus musculus	MEEBO	ILMN_196075	ILMN_196075	TIPIN	scl36831.10_121				21313607	NM_025372	Tipin		ILMN_1230900	005700341	S	20	TTTCTTTCATATCATTATTGGAACAGTCTGTCTCACTGCAATCTCAGCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that prevents the collapse of stalled replication forks [goid 48478] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_251021	ILMN_251021	BCOR	NM_029510.1	NM_029510.1		71458	28144862	NM_029510.1	Bcor	NP_083786.1	ILMN_3096287	001340066	A	5226	CTGCCCCAAAGACCTGGAAGCCTTCAATCCTGAAAGCAAGGAGCTGTTGG	X	-	11194679-11194728	XqA1.1	Mus musculus Bcl6 interacting corepressor (Bcor), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		8430401K06Rik; 5830466J11Rik; mKIAA1575; D930024N20Rik	8430401K06Rik; 5830466J11Rik; mKIAA1575; D930024N20Rik
Mus musculus	Riken	ILMN_203229	ILMN_203229	C030030A07RIK	ri|C030030A07|PX00074O12|AK047766|1791					AK047766	C030030A07Rik		ILMN_2555705	005260220	S	802	CATTCAAGCCATCTTGGGAGCAGTGGAGAGGACACAGCTTCAGGCAGCCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_222938	ILMN_222938	ALDH1L2	NM_153543.1	NM_153543.1		216188	23956315	NM_153543.1	Aldh1l2	NP_705771.1	ILMN_2898319	007560747	S	5775	GTACGTTTTCATTCTCCCAGACCCATGCACATGCAGCACTAACTGAACAG	10	-	82950319-82950368	10qC1	Mus musculus aldehyde dehydrogenase 1 family, member L2 (Aldh1l2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate [goid 9258] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + NADP+ + H2O = tetrahydrofolate + CO2 + NADPH + H+ [goid 16155] [evidence IEA];  [goid 16742] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]	D330038I09Rik; MGC19039	D330038I09Rik; MGC19039
Mus musculus	RefSeq	ILMN_222938	ILMN_222938	ALDH1L2	NM_153543.1	NM_153543.1		216188	23956315	NM_153543.1	Aldh1l2	NP_705771.1	ILMN_2757008	005810367	S	5361	CACCAATGCCCCTCCCGTATCTGCTGGTTGCCTTGATATTTGGTATTTGG	10	-	82950733-82950782	10qC1	Mus musculus aldehyde dehydrogenase 1 family, member L2 (Aldh1l2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate [goid 9258] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + NADP+ + H2O = tetrahydrofolate + CO2 + NADPH + H+ [goid 16155] [evidence IEA];  [goid 16742] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]	D330038I09Rik; MGC19039	D330038I09Rik; MGC19039
Mus musculus	RefSeq	ILMN_213609	ILMN_213609	1200002N14RIK	NM_027878.2	NM_027878.2		71712	142366339	NM_027878.2	1200002N14Rik	NP_082154.2	ILMN_1219820	005270100	S	2562	TCCACCTGTTCCAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCC	10	-	87785744-87785793	10qC1	Mus musculus RIKEN cDNA 1200002N14 gene (1200002N14Rik), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Dram	Dram
Mus musculus	Riken	ILMN_204491	ILMN_204491	B230319K02RIK	ri|B230319K02|PX00159C24|AK045898|1678					AK045898	B230319K02Rik		ILMN_1225136	000630605	S	1333	ACCCTGGTGGGACTTGGGATCCAACTGGCTCTCCTATCGAGGTTCCCATC										
Mus musculus	RefSeq	ILMN_221129	ILMN_221129	CLCA1	NM_009899.3	NM_009899.3		12722	118129834	NM_009899.3	Clca1	NP_034029.2	ILMN_2731377	000150703	S	2957	CATTCTCTTTTCACAGTGTGATGCAAGTTCACTTTGTATATGAAAATAAA	3	-	144393295-144393344	3qH2	Mus musculus chloride channel calcium activated 1 (Clca1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IDA]	Catalysis of the transmembrane transfer of chloride by a channel that opens in response to stimulus by a calcium ion or ions. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 5229] [evidence IDA]	Cacc	Cacc
Mus musculus	RefSeq	ILMN_190196	ILMN_190196	WNT16	NM_053116.3	NM_053116.3		93735	142352872	NM_053116.3	Wnt16	NP_444346.2	ILMN_1247108	000130273	S	68	CCAGAGGACCTTAGGCTACTTTCTCCGCCTTATCTTGCCTAGGGGACTGC	6	+	22238297-22238346	6qA3.1	Mus musculus wingless-related MMTV integration site 16 (Wnt16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	E130309I19Rik	E130309I19Rik
Mus musculus	RefSeq	ILMN_190196	ILMN_190196	WNT16	NM_053116.3	NM_053116.3		93735	142352872	NM_053116.3	Wnt16	NP_444346.2	ILMN_2468007	002810669	S	1364	TGTAAGTAACCTCTCCGTCCAGCCTAGCATGAGACGCCTCTGTAGTAACC	6	+	22248223-22248231:22248232-22248272	6qA3.1	Mus musculus wingless-related MMTV integration site 16 (Wnt16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	E130309I19Rik	E130309I19Rik
Mus musculus	Riken	ILMN_203465	ILMN_203465	8030478N11RIK	ri|8030478N11|PX00103G12|AK033261|2528					AK033261	8030478N11Rik		ILMN_1226181	006400451	S	2329	TGTCACCACGAAAACTTGCTAAGGGCCAGGGCCAGCTGAGGAGGGGAAGA										
Mus musculus	RefSeq	ILMN_222199	ILMN_255189	CREBBP	NM_001025432.1	NM_001025432.1		12914	70995310	NM_001025432.1	Crebbp	NP_001020603.1	ILMN_2746204	002470286	S	7195	TAGTAACCAGGTGCGATCTCCAGCCCCTGTGCAGTCTCCACGGCCCCAAT	16	-	4084310-4084359	16qA1	Mus musculus CREB binding protein (Crebbp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The region of a condensed chromosome kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions [goid 940] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51091] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process involved in preventing uncommitted germ-line stem cells from differentiating as another cell type [goid 30718] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]	CBP; AW558298; CBP/p300	CBP; AW558298; CBP/p300
Mus musculus	RefSeq	ILMN_216566	ILMN_255189	CREBBP	NM_001025432.1	NM_001025432.1		12914	70995310	NM_001025432.1	Crebbp	NP_001020603.1	ILMN_1255457	003610196	S	1932	GCACTGGTGTTCGAAAAGGCTGGCATGAACATGTGACTCAGGACCTACGG	16	-	4126486-4126535	16qA1	Mus musculus CREB binding protein (Crebbp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The region of a condensed chromosome kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions [goid 940] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51091] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process involved in preventing uncommitted germ-line stem cells from differentiating as another cell type [goid 30718] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence TAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]	CBP; AW558298; CBP/p300	CBP; AW558298; CBP/p300
Mus musculus	RefSeq	ILMN_210123	ILMN_210123	GJB3	NM_008126.1	NM_008126.1		14620	6680012	NM_008126.1	Gjb3	NP_032152.1	ILMN_2879102	006060433	S	1504	CCCTCTGCACCCTGTAGCCAGGACCTTGGAGGCATGCGTATCCTGTCATA	4	-	127002548-127002597	4qD2.2	Mus musculus gap junction protein, beta 3 (Gjb3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IDA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cx31; Cnx31; D4Wsu144e; Gjb-3	Cx31; Cnx31; D4Wsu144e; Gjb-3
Mus musculus	Riken	ILMN_204577	ILMN_204577	C130020C07RIK	ri|C130020C07|PX00168G06|AK047886|2507					AK047886	C130020C07Rik		ILMN_2566052	003610634	S	2393	GACCCTCTCATTGAGGATGATCTGATGCCCTCTTCTGGCCTCGGAGTGCA										
Mus musculus	RefSeq	ILMN_196616	ILMN_196616	CC1	XM_123485.1	XM_123485.1			20819699	XM_123485.1	Cc1		ILMN_2525034	006900735	S	2938	GAACAAAATCACCTGAAGGAATTAGAGGACACACTGCACATCAGGCACAC										
Mus musculus	RefSeq	ILMN_200080	ILMN_231837	LOC665531	XM_977595.1	XM_977595.1		665531	94400065	XM_977595.1	LOC665531	XP_982689.1	ILMN_1220180	005220646	S	21	GCTTCGGAATGCACGCTCTGTGAATGTGATGGACACGGAGAAACTCGTGC	16	-	12763629-12763678		PREDICTED: Mus musculus similar to filaggrin (LOC665531), mRNA.					
Mus musculus	RefSeq	ILMN_218430	ILMN_218430	CTNNBIP1	NM_023465.3	NM_023465.3		67087	114158702	NM_023465.3	Ctnnbip1	NP_075954.1	ILMN_1232182	006180400	S	2464	TCTAAAGTCCGGTGTTGCCAGCTTCAGTTGGTTCCTGTGACTGCCTCGAG	4	+	148940343-148940392	4qE2	Mus musculus catenin beta interacting protein 1 (Ctnnbip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IDA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI]	1110008O09Rik; 2310001I19Rik; AW457332; ICAT; Catnbip1	1110008O09Rik; 2310001I19Rik; AW457332; ICAT; Catnbip1
Mus musculus	RefSeq	ILMN_218025	ILMN_218025	HEY1	NM_010423.2	NM_010423.2		15213	117606331	NM_010423.2	Hey1	NP_034553.2	ILMN_2690596	007570598	S	1891	GTAAGCGATCGGAGTCTGAAAGTAGCTTGGTGCCTGTGAAACACAACCCG	3	-	8663623-8663672	3qA1	Mus musculus hairy/enhancer-of-split related with YRPW motif 1 (Hey1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]	AI316788; HRT1; Hesr1; hesr-1; Herp2; AI414254	AI316788; HRT1; Hesr1; hesr-1; Herp2; AI414254
Mus musculus	RefSeq	ILMN_241131	ILMN_241131	ZFP174	NM_001081217.1	NM_001081217.1		385674	124487046	NM_001081217.1	Zfp174	NP_001074686.1	ILMN_3104048	003120600	A	1514	CAGAGGTCACCCGCTGAGAGAGTTAAAGAGAAGCAGAGGAGGCCGAAGAA	16	+	3854452-3854501	16qA1	Mus musculus zinc finger protein 174 (Zfp174), mRNA.				Gm1754	Gm1754
Mus musculus	RefSeq	ILMN_208908	ILMN_208908	ZFP697	NM_172863.3	NM_172863.3		242109	142375486	NM_172863.3	Zfp697	NP_766451.2	ILMN_2590680	006280543	S	2836	AATTGCCAAATAGCACAAACAGTGAATGTTTTCCAGTTATACGAGATGCC	3	+	98233611-98233660	3qF2.2	Mus musculus zinc finger protein 697 (Zfp697), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	9430053K19; AI467503	9430053K19; AI467503
Mus musculus	RefSeq	ILMN_223229	ILMN_223229	BOC	NM_172506.2	NM_172506.2		117606	142344121	NM_172506.2	Boc	NP_766094.1	ILMN_1241005	002370068	S	3936	TTTTTCTATTATAGCCATATTTATATATTTATGCACTTGTAAATAAATGT	16	-	44485600-44485649	16qB4	Mus musculus biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein (Boc), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence TAS]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45663] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence TAS]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IDA]; Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence ISO]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence ISO]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein stimulus [goid 51789] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mFLJ00376; 4732455C11; DKFZp434L072	mFLJ00376; 4732455C11; DKFZp434L072
Mus musculus	RefSeq	ILMN_200676	ILMN_200676	LOC384469	XM_357662.1	XM_357662.1			38085072	XM_357662.1	LOC384469		ILMN_2539604	007050564	S	528	TGCACAACGCTACCATAAGAGTTCAAATGGGGCTTCCGGACGAACACAGG										
Mus musculus	RefSeq	ILMN_195544	ILMN_317836	V2R3	XM_001474548.1	XM_001474548.1		22309	149265951	XM_001474548.1	V2r3	XP_001474598.1	ILMN_1234921	006350113	S	1547	GTACTGCAGGATTCAGGAAAATTCATCAGAAAGAAACAGCAGACTGCTGC					PREDICTED: Mus musculus vomeronasal 2, receptor, 3, transcript variant 1 (V2r3), mRNA.					
Mus musculus	MEEBO	ILMN_216678	ILMN_216678	OLFR902	scl37095.1.1_9	XM_146734.1			20884560	XM_146734.1	Olfr902		ILMN_1217334	004850520	S	622	TTTCTACTCCTACCATCTTTATCTCTTATGGTTTTATCCTCTCCAGCATC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_210436	ILMN_210436	GBP2	NM_010260.1	NM_010260.1		14469	6753949	NM_010260.1	Gbp2	NP_034390.1	ILMN_3122961	001400041	A	2154	GTCACCTGTGTTATAGGTACTCTCGGCCTTCATCATGCCCAGCCATACGT	3	+	142300671-142300720	3qH1	Mus musculus guanylate binding protein 2 (Gbp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210436	ILMN_210436	GBP2	NM_010260.1	NM_010260.1		14469	6753949	NM_010260.1	Gbp2	NP_034390.1	ILMN_3047389	006860600	I	69	CTGCAGCCAGCCTCAGAGGCAAAGCTGACCAGCATTGAAAAGCTGCTTCT	3	+	142283695-142283744	3qH1	Mus musculus guanylate binding protein 2 (Gbp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210436	ILMN_210436	GBP2	NM_010260.1	NM_010260.1		14469	6753949	NM_010260.1	Gbp2	NP_034390.1	ILMN_2605602	002100068	S	2236	CTACAGATAGCTTCTGTAATCACAGAACAGGCAACTTTTAACTAACTTGC	3	+	142300753-142300802	3qH1	Mus musculus guanylate binding protein 2 (Gbp2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215488	ILMN_215488	MS4A6B	NM_027209.3	NM_027209.3		69774	118130332	NM_027209.3	Ms4a6b	NP_081485.2	ILMN_1254692	003610286	S	1265	CACTGGTGTGAATAAACAAGGGACCTGCAATGAAGTCTGAAGAAGTTTCC	19	+	11604471-11604520	19qA	Mus musculus membrane-spanning 4-domains, subfamily A, member 6B (Ms4a6b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1810027D10Rik	1810027D10Rik
Mus musculus	RefSeq	ILMN_191875	ILMN_313263	EG668921	XR_034712.1	XR_034712.1		668921	149250041	XR_034712.1	EG668921		ILMN_1235996	001980692	S	1598	GAAGTTCCTAAGCTTCCTCTCCCTGTACTGGTCAGGTGAAGACCCACTCC	2	+	148842356-148842405	2qG3	PREDICTED: Mus musculus predicted gene, EG668921 (EG668921), misc RNA.					
Mus musculus	RefSeq	ILMN_215581	ILMN_215581	2610524H06RIK	NM_181075.3	NM_181075.3		330173	110624788	NM_181075.3	2610524H06Rik	NP_851420.1	ILMN_1225123	001570148	S	87	GAGGCCCCGAGCCCCGGGTTGCCGCCGGAGCAGAGCCGGTCCTACGAGGT	5	-	115273341-115273390	5qF	Mus musculus RIKEN cDNA 2610524H06 gene (2610524H06Rik), mRNA.					
Mus musculus	MEEBO	ILMN_192411	ILMN_192411	ALX4	scl20594.3_2				6671540	NM_007442	Alx4		ILMN_2487824	005890594	S	7	AGGCAGCTGACACTCCCAGCACCCCTTTGTCGGGTGCAGCCAAGACTGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	MEEBO	ILMN_192411	ILMN_192411	ALX4	scl20594.3_2				6671540	NM_007442	Alx4		ILMN_2708458	003120064	S	1689	AGCTGAGACCCTGTCTTTCTTCGTGTTCTTCCACCCCTTCCGTTTGACTT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IPI]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IGI]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IGI]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]		
Mus musculus	RefSeq	ILMN_224498	ILMN_224498	GM773	NM_001033423.1	NM_001033423.1		331416	75677457	NM_001033423.1	Gm773	NP_001028595.1	ILMN_3014722	004490673	I	813	GCCGAGCTGATGTAATTCATGTTACCTCAGACACATGCCTTTCCAGTTTC	X	-	52536699-52536748	XqA5	Mus musculus gene model 773, (NCBI) (Gm773), mRNA.					
Mus musculus	RefSeq	ILMN_224498	ILMN_224498	GM773	NM_001033423.1	NM_001033423.1		331416	75677457	NM_001033423.1	Gm773	NP_001028595.1	ILMN_3085936	000360037	A	554	CACGGCAGGTCCACAGCCTGAAAGCACTTAAGCAGGCAAATGACACGCTC	X	-	52540441-52540490	XqA5	Mus musculus gene model 773, (NCBI) (Gm773), mRNA.					
Mus musculus	RefSeq	ILMN_197154	ILMN_197154	LOC380835	XM_354743.1	XM_354743.1			38074332	XM_354743.1	LOC380835		ILMN_1251080	002940402	S	12	CATTCATTTCCTCCTACGGTGGACGCGGATGCTGGTGCTGGGAGGAGAGC										
Mus musculus	RefSeq	ILMN_197246	ILMN_243198	GM274	XM_905472.2	XM_905472.2		218304	94395405	XM_905472.2	Gm274	XP_910565.2	ILMN_1231202	001440167	S	1060	CACACAGAACTTCAACCCACACCTCTGAAGGCTGCTGGCTCCCCACAACC				13qB3	PREDICTED: Mus musculus gene model 274, (NCBI) (Gm274), mRNA.					
Mus musculus	MEEBO	ILMN_223436	ILMN_223436	B230319C09RIK	scl29837.4_430				51712367	XM_485796	B230319C09Rik		ILMN_2764074	001740241	S	1918	CCTGACCTGAACCCAGATCTGAGACTAAGTCCAGCTATAGGCTAGAGCCC										
Mus musculus	RefSeq	ILMN_210156	ILMN_210156	MUG2	NM_008646.3	NM_008646.3		17837	153945746	NM_008646.3	Mug2	NP_032672.2	ILMN_2685043	001170471	S	4344	ACTACTATGAGACAGATGAAGTGGCTTATGCTGAATACAGCAGTCCCTGC				6qF1	Mus musculus murinoglobulin 2 (Mug2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 17114] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210156	ILMN_210156	MUG2	NM_008646.3	NM_008646.3		17837	153945746	NM_008646.3	Mug2	NP_032672.2	ILMN_1257246	001770551	S	2015	GGAAGAGAGAAGGATGTCTACAGATATGTGGAGGACATGGATTTAAAGGC				6qF1	Mus musculus murinoglobulin 2 (Mug2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 17114] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213312	ILMN_213312	RAD9	NM_011237.1	NM_011237.1		19367	6755281	NM_011237.1	Rad9	NP_035367.1	ILMN_2933993	000510441	S	1738	CACTCAGTCTGCCCTCCCAGGTGGCTTTGTACCAAAGAACTGCTGGCCCA	19	-	4195456-4195505	19qA	Mus musculus RAD9 homolog (S. pombe) (Rad9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [evidence IGI]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_196512	ILMN_196512	4933401B06RIK	XM_136018.3	XM_136018.3			38086578	XM_136018.3	4933401B06Rik		ILMN_1247518	005860379	S	1119	CCTGTTCCCAGAGGCTTTCTGACTGCCTCCTTCTGGCAGTCTTAATGTCC										
Mus musculus	Riken	ILMN_202345	ILMN_202345	4930406P12RIK	ri|4930406P12|PX00029O18|AK015109|1499					AK015109	4930406P12Rik		ILMN_2548883	004290008	S	1417	CTGCATGACAGCCGTTTTTGCCTTCTCTCTAGGCTGACACCCAACTTTAC										
Mus musculus	MEEBO	ILMN_215786	ILMN_215786	TG737RPW	scl46241.26.1_38				6678332	NM_009376	Tg737Rpw		ILMN_2772847	002650360	S	2493	GACGAGGATGATTTTGCTGATGAAGAGTTAGGAGATGACTTGCTCCCAGA										
Mus musculus	RefSeq	ILMN_210985	ILMN_210985	DUSP26	NM_025869.3	NM_025869.3		66959	146135077	NM_025869.3	Dusp26	NP_080145.1	ILMN_2611295	000460075	S	1640	GGGAGCTGCTCAGGGTCAAATAACTTGGAGTCTTTTAGGTGGTCATAGTC				8qA3	Mus musculus dual specificity phosphatase 26 (putative) (Dusp26), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	2310043K02Rik; Skrp3	2310043K02Rik; Skrp3
Mus musculus	RefSeq	ILMN_197184	ILMN_197184	LOC380841	XM_354750.1	XM_354750.1			38074498	XM_354750.1	LOC380841		ILMN_1237010	007040095	S	607	GCTAGCTCGGAAGTGAGGGCAACACGCAGAAAAATCGATGAAGAAAAGGG										
Mus musculus	RefSeq	ILMN_201467	ILMN_201467	LOC382175	XM_356277.1	XM_356277.1			38094023	XM_356277.1	LOC382175		ILMN_1230452	004250672	S	310	ACCGATGTGCCTGAGAGGTCCAATGTGGGAAAAAGTGCCAAGTTAGTGTA										
Mus musculus	RefSeq	ILMN_219714	ILMN_219714	OLFR702	NM_146597.1	NM_146597.1		258590	22129458	NM_146597.1	Olfr702	NP_666808.1	ILMN_1252706	007000379	S	590	TGGCTCTGTTTTTAGTGGGGGTGATTATTCTATTAGCTCCTGTCTCACTC	7	-	113967399-113967448	7qE3	Mus musculus olfactory receptor 702 (Olfr702), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR260-4	MOR260-4
Mus musculus	RefSeq	ILMN_243440	ILMN_243440	COX18	NM_001033310.1	NM_001033310.1		231430	75677487	NM_001033310.1	Cox18	NP_001028482.1	ILMN_3002011	000130689	S	1224	GTTTTGCTGAGAACAGGATTAGGTCCTGTGTGATCTCTACCCAACTGTCC	5	-	91289945-91289994	5qE1	Mus musculus COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) (Cox18), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process by which a protein is incorporated into a biological membrane [goid 51205] [evidence IEA]		BC038311	BC038311
Mus musculus	RefSeq	ILMN_214787	ILMN_244379	AURKB	NM_011496.1	NM_011496.1		20877	51317393	NM_011496.1	Aurkb	NP_035626.1	ILMN_1239230	006290390	S	1375	GTCCCTGTCATTTTTCAGTGTTCTTTGTATGTCTGTGTATGTGTTCTGAG	11	+	68864582-68864631	11qB3	Mus musculus aurora kinase B (Aurkb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	STK-1; Ark2; AL022959; Stk12; Aim1; AurB; IPL1; Aik2; AIRK2; Stk5; AIM-1	STK-1; Ark2; AL022959; Stk12; Aim1; AurB; IPL1; Aik2; AIRK2; Stk5; AIM-1
Mus musculus	RefSeq	ILMN_197825	ILMN_197825	LOC230622	XM_144000.8	XM_144000.8		230622	149252856	XM_144000.8	LOC230622	XP_144000.8	ILMN_2529497	004670341	S	507	CAGCACAGGTGTGAGGTTGGAGTGTCATTCAGGAGGTTGGTTCCCACAGC	4	-	112909035-112909084	4qD1	PREDICTED: Mus musculus hypothetical LOC230622 (LOC230622), mRNA.					
Mus musculus	RefSeq	ILMN_190265	ILMN_254534	MED12	NM_021521.2	NM_021521.2		59024	125628661	NM_021521.2	Med12	NP_067496.2	ILMN_2468617	003310373	S	6736	GCTACTGAGTCACCTGGAGGAACTGCTTGTACACTGGATGTGGCCCAGCC	X	+	98492562-98492569:98492570-98492611	XqD	Mus musculus mediator of RNA polymerase II transcription, subunit 12 homolog (yeast) (Med12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	Mopa; Trap230; Tnrc11; 230kDa; OPA-1	Mopa; Trap230; Tnrc11; 230kDa; OPA-1
Mus musculus	RefSeq	ILMN_217139	ILMN_233156	PBRM1	NM_001081251.1	NM_001081251.1		66923	124486950	NM_001081251.1	Pbrm1	NP_001074720.1	ILMN_2679502	003450025	S	4834	GCCTTCCACCTTTGCAGGGCCCAGTTGATGGCCTTGTTAGCATGGGCAGC	14	+	31927059-31927108	14qB	Mus musculus polybromo 1 (Pbrm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	BAF180; AI507524; Pb1; 2610016F04Rik	BAF180; AI507524; Pb1; 2610016F04Rik
Mus musculus	RefSeq	ILMN_216134	ILMN_233156	PBRM1	NM_001081251.1	NM_001081251.1		66923	124486950	NM_001081251.1	Pbrm1	NP_001074720.1	ILMN_2732190	002750161	S	6356	GCACATAGCTGTGCAGGGTAGACTGCCTACATACACATGGCCGGGATTCT	14	+	31933017-31933066	14qB	Mus musculus polybromo 1 (Pbrm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	BAF180; AI507524; Pb1; 2610016F04Rik	BAF180; AI507524; Pb1; 2610016F04Rik
Mus musculus	RefSeq	ILMN_216134	ILMN_233156	PBRM1	NM_001081251.1	NM_001081251.1		66923	124486950	NM_001081251.1	Pbrm1	NP_001074720.1	ILMN_2667709	005340370	S	6321	CCAAGAAAGAGTGTAAGTGGACACAAGCTGTGCCTGCACATAGCTGTGCA	14	+	31932982-31933031	14qB	Mus musculus polybromo 1 (Pbrm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	BAF180; AI507524; Pb1; 2610016F04Rik	BAF180; AI507524; Pb1; 2610016F04Rik
Mus musculus	RefSeq	ILMN_222698	ILMN_233156	PBRM1	NM_001081251.1	NM_001081251.1		66923	124486950	NM_001081251.1	Pbrm1	NP_001074720.1	ILMN_1233554	006200022	S	2976	AGAATTCGTGATGAACTCTGCAAAAATGGAGAGATCCTTCTTTCTCCAGC	14	+	31888009-31888058	14qB	Mus musculus polybromo 1 (Pbrm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	BAF180; AI507524; Pb1; 2610016F04Rik	BAF180; AI507524; Pb1; 2610016F04Rik
Mus musculus	RefSeq	ILMN_185456	ILMN_325030	LOC100046003	XM_001475465.1	XM_001475465.1		100046003	149262069	XM_001475465.1	LOC100046003	XP_001475515.1	ILMN_2427178	003840167	S	2963	CCACCCCCCAATTTCTACCTCCATAGACTGGCCAGAATTTAGCTTCAGTG					PREDICTED: Mus musculus similar to tripartite motif-containing 41 (LOC100046003), mRNA.					
Mus musculus	RefSeq	ILMN_199350	ILMN_199350	LOC385780	XM_358943.1	XM_358943.1			38080531	XM_358943.1	LOC385780		ILMN_1241341	001770022	S	1347	CAACGATGGTGCAGAAGATGCTGACCTCACGAGGACTGTTCCTGATCCTG										
Mus musculus	RefSeq	ILMN_222732	ILMN_222732	PCDHA12	NM_138663.2	NM_138663.2		192164	31077090	NM_138663.2	Pcdha12	NP_619604.1	ILMN_2753977	000150278	S	2294	TAAGACCGACCTCATGGCCTTTAGTCCTAGTCTCCCTCCTGTGTTAGGCT	18	+	37182177-37182226	18qB3	Mus musculus protocadherin alpha 12 (Pcdha12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Crnr5; Cnr5; Pcdha13	Crnr5; Cnr5; Pcdha13
Mus musculus	RefSeq	ILMN_217637	ILMN_329523	KIF20B	NM_183046.1	NM_183046.1		240641	133505570	NM_183046.1	Kif20b	NP_898867.1	ILMN_2685759	002900138	S	5353	CTGATCATCAGATTCTCAAACGACGGCTTCGAACACGCACAGCCAAATAA	19	+	35050011-35050060	19qC2	Mus musculus kinesin family member 20B (Kif20b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	B130024C23; C330014J10Rik	B130024C23; C330014J10Rik
Mus musculus	RefSeq	ILMN_201299	ILMN_201299	LOC382392	XM_356483.1	XM_356483.1			38090637	XM_356483.1	LOC382392		ILMN_2541798	005720114	S	856	CACCTCATCTGTGGGAAGAACGCCAGTGCACCTTTGCACATTGCTGGAGC										
Mus musculus	Riken	ILMN_206093	ILMN_206093	E330040E10RIK	ri|E330040E10|PX00319C07|AK054549|3683					AK054549	E330040E10Rik		ILMN_2577493	002360349	S	3629	ATGCCAGCCTTGCGTGCGCCACCACGCCCAGCCCCCAATGATAATCTTAA										
Mus musculus	MEEBO	ILMN_214656	ILMN_214656	E030030I06RIK	scl00319887.1_120	XM_286230.2			38090381	XM_286230.2	E030030I06Rik		ILMN_2650420	006550725	S	348	AGTACGAGTGCTTGGCAGAGATCGGCGAAGGCCCCCGACCTGAAGAATGG								Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211956	ILMN_211956	UBE2Q2	NM_180600.2	NM_180600.2		109161	142344098	NM_180600.2	Ube2q2	NP_850931.1	ILMN_2621122	000770255	S	584	CCTCTGCAGATTATATAACCTTCCTAAGCACCTGGATGTTGAGATGCTAG	9	+	55016042-55016091	9qB	Mus musculus ubiquitin-conjugating enzyme E2Q (putative) 2 (Ube2q2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	3010021M21Rik; MGC19370	3010021M21Rik; MGC19370
Mus musculus	RefSeq	ILMN_211956	ILMN_211956	UBE2Q2	NM_180600.2	NM_180600.2		109161	142344098	NM_180600.2	Ube2q2	NP_850931.1	ILMN_2749911	001110468	S	2114	GAGGTCATTTTACCTTTCCATTTATTAGCGGGGTGTTGCAATTGACGATA	9	+	55054518-55054567	9qB	Mus musculus ubiquitin-conjugating enzyme E2Q (putative) 2 (Ube2q2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	3010021M21Rik; MGC19370	3010021M21Rik; MGC19370
Mus musculus	RefSeq	ILMN_214743	ILMN_214743	NFYC	NM_008692.3	NM_008692.3		18046	114326542	NM_008692.3	Nfyc	NP_032718.2	ILMN_3090793	004010601	A	1867	AGATTGTGCTCATCTCCGTTGCTGCATGGACTCCAGACTGCATGAAATGC	4	-	120430067-120430116	4qD2.2	Mus musculus nuclear transcription factor-Y gamma (Nfyc), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214743	ILMN_214743	NFYC	NM_008692.3	NM_008692.3		18046	114326542	NM_008692.3	Nfyc	NP_032718.2	ILMN_2651428	005290706	S	1437	TTGAGCTATGTGTCCAATGCTATGAAACGAGAATATTAAATAACATATTT	4	-	120430497-120430546	4qD2.2	Mus musculus nuclear transcription factor-Y gamma (Nfyc), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221882	ILMN_221882	SNAI1	NM_011427.2	NM_011427.2		20613	31981483	NM_011427.2	Snai1	NP_035557.1	ILMN_2904765	004860255	S	1390	TGGCCATCACTTGTTAGGGGCCAAGTGGGGTGCTTCAGCCTGGCCAATGT	2	+	167368115-167368164	2qH3	Mus musculus snail homolog 1 (Drosophila) (Snai1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Snail; Sna1; Sna; AI194338; Snail1	Snail; Sna1; Sna; AI194338; Snail1
Mus musculus	RefSeq	ILMN_221882	ILMN_221882	SNAI1	NM_011427.2	NM_011427.2		20613	31981483	NM_011427.2	Snai1	NP_035557.1	ILMN_1241355	005090300	S	841	TCCGGAGGCCCTCGCTGACCCTGCTACCTCCCCATCCTCGCTGGCATCTT	2	+	167367566-167367583:167367584-167367615	2qH3	Mus musculus snail homolog 1 (Drosophila) (Snai1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Snail; Sna1; Sna; AI194338; Snail1	Snail; Sna1; Sna; AI194338; Snail1
Mus musculus	RefSeq	ILMN_194821	ILMN_194821	TSPAN6	NM_019656.3	NM_019656.3		56496	125490374	NM_019656.3	Tspan6	NP_062630.2	ILMN_2509918	002370021	S	593	GTTGCGGTGTCACCAATTACGGAGATTGGAAAGGTACGAACTATTACTCA	X	-	130429544-130429593	XqE3	Mus musculus tetraspanin 6 (Tspan6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI316786; T245; Tm4sf6; TSPAN-6; 6720473L21Rik; MGC117923; Tm4sf	AI316786; T245; Tm4sf6; TSPAN-6; 6720473L21Rik; MGC117923; Tm4sf
Mus musculus	RefSeq	ILMN_194821	ILMN_194821	TSPAN6	NM_019656.3	NM_019656.3		56496	125490374	NM_019656.3	Tspan6	NP_062630.2	ILMN_2515784	006940577	S	1357	AGCTGGTCATCAGATGGTGCCCATCAATGGCGTTCCTGCATGGTGGTACC	X	-	130425965-130426014	XqE3	Mus musculus tetraspanin 6 (Tspan6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI316786; T245; Tm4sf6; TSPAN-6; 6720473L21Rik; MGC117923; Tm4sf	AI316786; T245; Tm4sf6; TSPAN-6; 6720473L21Rik; MGC117923; Tm4sf
Mus musculus	RefSeq	ILMN_211421	ILMN_229377	GM459	XM_992644.1	XM_992644.1		243451	94378733	XM_992644.1	Gm459	XP_997738.1	ILMN_2615739	005720037	S	77	AGTCTCCAGCCATCACAGCTGCATCTCTGGGGCAAAAGGTCACCATCACC				6qC1	PREDICTED: Mus musculus gene model 459, (NCBI) (Gm459), mRNA.					
Mus musculus	RefSeq	ILMN_260319	ILMN_260319	STC1	NM_009285.2	NM_009285.2		20855	31543781	NM_009285.2	Stc1	NP_033311.2	ILMN_2942344	007100468	S	3941	AGACCCACAAGGTGTCCTTCAACCTCTATGTATCATTGTGTGCACACGTC	14	+	67994878-67994927	14qD2	Mus musculus stanniocalcin 1 (Stc1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The regulation of the levels, transport, and metabolism of monovalent inorganic anions within a cell or between a cell and its external environment [goid 30320] [evidence TAS]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence TAS]	Stc	Stc
Mus musculus	RefSeq	ILMN_197874	ILMN_315304	GM572	NM_001085505.1	NM_001085505.1		230909	148227851	NM_001085505.1	Gm572	NP_001078974.1	ILMN_1248045	007550164	S	1039	ACAGGGTAGACCTGAGCCTGGACTTTGCAGAGATGGACTCCCCAGTACAC				4qE2	Mus musculus gene model 572, (NCBI) (Gm572), mRNA.					
Mus musculus	Riken	ILMN_205266	ILMN_205266	PIK3C2G	ri|E330023G08|PX00212J14|AK054415|3089					AK054415	Pik3c2g		ILMN_1245295	004730706	S	2907	AAGGGCATCACAGCCCCAAGGTTGCTTAAGGATTCCAGAGACTACTTGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate [goid 35005] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196541	ILMN_230469	LOC634026	XM_908623.2	XM_908623.2		634026	94388161	XM_908623.2	LOC634026	XP_913716.2	ILMN_1217853	005050477	S	409	TCCTCATCTTGTGGAAGCGTCTGGAAGTGCTGAAGGAACACTGGGGCCGA					PREDICTED: Mus musculus hypothetical LOC634026 (LOC634026), mRNA.					
Mus musculus	RefSeq	ILMN_213645	ILMN_213645	BXDC5	NM_027371.2	NM_027371.2		70285	144922718	NM_027371.2	Bxdc5	NP_081647.1	ILMN_2745841	004480220	S	660	GCCAAACGGTCCAACCGCTCATTTTAAAATGAGCAGTGTTCGTCTTCGTA	3	-	146171117-146171166	3qH2	Mus musculus brix domain containing 5 (Bxdc5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]	2310066N05Rik; Rpf1; MGC102255; 2210420E24Rik	2310066N05Rik; Rpf1; MGC102255; 2210420E24Rik
Mus musculus	RefSeq	ILMN_213645	ILMN_213645	BXDC5	NM_027371.2	NM_027371.2		70285	144922718	NM_027371.2	Bxdc5	NP_081647.1	ILMN_2639271	000650593	S	1073	GGACTAGGGGAGCAGTACTGAATTTTGCTGGATTGGCCTGTCTTGAAAAA	3	-	146169447-146169496	3qH2	Mus musculus brix domain containing 5 (Bxdc5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]	2310066N05Rik; Rpf1; MGC102255; 2210420E24Rik	2310066N05Rik; Rpf1; MGC102255; 2210420E24Rik
Mus musculus	RefSeq	ILMN_199378	ILMN_199378	EG382109	NM_198674.2	NM_198674.2		382109	118130897	NM_198674.2	EG382109	NP_941076.1	ILMN_1218784	006040484	S	1350	GTGATGATGTGAGCATAATTGGAGTCATGACAAATAGTCCTGCCCCCTGC	9	-	109620504-109620553	9qF2	Mus musculus predicted gene, EG382109 (EG382109), mRNA.					
Mus musculus	RefSeq	ILMN_199378	ILMN_199378	EG382109	NM_198674.2	NM_198674.2		382109	118130897	NM_198674.2	EG382109	NP_941076.1	ILMN_3074498	000990010	I	558	GGGACTGTCACAACAGCGAAGCTCTAGCAACTAAGCGCATGGTCTCTTCC	9	-	109635065-109635114	9qF2	Mus musculus predicted gene, EG382109 (EG382109), mRNA.					
Mus musculus	RefSeq	ILMN_199378	ILMN_199378	EG382109	NM_198674.2	NM_198674.2		382109	118130897	NM_198674.2	EG382109	NP_941076.1	ILMN_3153441	000150612	A	1275	CGCTGCTCAGAAAGTGTTATCGACTGCAAAACAGGAGATACCTGCCCCCG	9	-	109624181-109624230	9qF2	Mus musculus predicted gene, EG382109 (EG382109), mRNA.					
Mus musculus	Riken	ILMN_204731	ILMN_204731	B930014J03RIK	ri|B930014J03|PX00163M15|AK047057|2535					AK047057	B930014J03Rik		ILMN_1233274	004490102	S	2336	GCATTCACCACGGACCTGAGATTCAAATGGGAGGGTTTGGAGCATAGCCG										
Mus musculus	Riken	ILMN_203194	ILMN_203194	A930030J18RIK	ri|A930030J18|PX00067E22|AK044660|3139					AK044660	A930030J18Rik		ILMN_2555438	006650673	S	3075	GTGCACACGCACGCACACACACGTACACTCAGGCAAACCACTCAATCATG										
Mus musculus	RefSeq	ILMN_213287	ILMN_213287	SEMA3F	NM_011349.2	NM_011349.2		20350	31543682	NM_011349.2	Sema3f	NP_035479.2	ILMN_2635631	006040242	S	3335	TACCCAGGCCACAGCCACTCTTGGGTTCCATCTTGCTAATAAATGCTGGC	9	-	107539611-107539660	9qF1	Mus musculus sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3 F (Sema3f), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IDA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]	Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal [goid 45499] [evidence IDA]	Semak; Sema IV; Sema4	Semak; Sema IV; Sema4
Mus musculus	RefSeq	ILMN_216103	ILMN_225727	PNN	NM_008891.2	NM_008891.2		18949	112420989	NM_008891.2	Pnn	NP_032917.2	ILMN_2773034	001400739	S	2777	TGCCAGGTTTTTACAGCTTTGACAGGGAATAGTTCTTTTAAAACATTTAT	12	+	60174312-60174361	12qC1	Mus musculus pinin (Pnn), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence ISO]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISO]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	D12Ertd512e; AU045199	D12Ertd512e; AU045199
Mus musculus	RefSeq	ILMN_211763	ILMN_211763	PRNP	NM_011170.1	NM_011170.1		19122	13173472	NM_011170.1	Prnp	NP_035300.1	ILMN_2619316	006770379	S	1966	CCGTGTGACCCTTGGGCTTTCAGCGTGCACTCAGTTCCGTAGGATTCCAA	2	+	131763976-131764025	2qF2	Mus musculus prion protein (Prnp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence TAS]	The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence TAS]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IDA]	CD230; AI325101; Prn-i; PrP<C>; PrPSc; Prn-p; Sinc; PrPC; PrP; AA960666	CD230; AI325101; Prn-i; PrP<C>; PrPSc; Prn-p; Sinc; PrPC; PrP; AA960666
Mus musculus	MEEBO	ILMN_224291	ILMN_224291	5730589K01RIK	scl0268741.7_16				12963678	NM_023434	5730589K01Rik		ILMN_1220569	005420692	S	2337	AACGGTCAGACAACTTGCCTAGAATGTCATTGGGCGAGTGCTTTGCTTTG										
Mus musculus	RefSeq	ILMN_218254	ILMN_243798	PGLYRP4	NM_207263.1	NM_207263.1		384997	46402282	NM_207263.1	Pglyrp4	NP_997146.1	ILMN_2693612	006040554	S	756	GTGCCGCCTGCTGGTCCGAGATCTCCAGTCGTTCTTCATGAACAGGCTAA	3	+	90539494-90539543	3qF1	Mus musculus peptidoglycan recognition protein 4 (Pglyrp4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [evidence IEA]	Catalysis of the hydrolysis of the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell-wall glycopeptides [goid 8745] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm1478; Gm413	Gm1478; Gm413
Mus musculus	RefSeq	ILMN_243798	ILMN_243798	PGLYRP4	NM_207263.1	NM_207263.1		384997	46402282	NM_207263.1	Pglyrp4	NP_997146.1	ILMN_3154568	002680538	A	567	GCCATTGCTTGCGAAAAGTGAAGACTGCCTGGTCCCTCCACAGAAGGGGA	3	+	90536933-90536982	3qF1	Mus musculus peptidoglycan recognition protein 4 (Pglyrp4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [evidence IEA]	Catalysis of the hydrolysis of the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell-wall glycopeptides [goid 8745] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm1478; Gm413	Gm1478; Gm413
Mus musculus	RefSeq	ILMN_243798	ILMN_243798	PGLYRP4	NM_207263.1	NM_207263.1		384997	46402282	NM_207263.1	Pglyrp4	NP_997146.1	ILMN_3075524	001170075	I	1127	GGAAGCCCTATCCCTATCTGAGGATGCTCTTCCTCCTGCTGGGTGTCGTC	3	+	90544386-90544432	3qF1	Mus musculus peptidoglycan recognition protein 4 (Pglyrp4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [evidence IEA]	Catalysis of the hydrolysis of the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell-wall glycopeptides [goid 8745] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm1478; Gm413	Gm1478; Gm413
Mus musculus	RefSeq	ILMN_187939	ILMN_187939	TXNL2	NM_023140.3	NM_023140.3		30926	32129273	NM_023140.3	Txnl2	NP_075629.2	ILMN_2925066	006590086	S	1251	GCGTGTAGAATGTCTCTGTAGTGATGCTTGTGTGTAGCATGTCTGTGTAA	7	+	137306537-137306586	7qF4	Mus musculus thioredoxin-like 2 (Txnl2), mRNA.				PICOT	PICOT
Mus musculus	RefSeq	ILMN_220907	ILMN_220907	CDC42EP4	NM_020006.1	NM_020006.1		56699	9910141	NM_020006.1	Cdc42ep4	NP_064390.1	ILMN_2728431	004010133	S	3182	CTAGATTCAGACCCTGAAGTGCTCACTGGGCCCCTGACAGGTGCTCCTAC	11	-	113588337-113588386	11qE2	Mus musculus CDC42 effector protein (Rho GTPase binding) 4 (Cdc42ep4), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Borg4; 1500041M20Rik; CEP4	Borg4; 1500041M20Rik; CEP4
Mus musculus	RefSeq	ILMN_221658	ILMN_242237	3110001K24RIK	NM_029389.2	NM_029389.2		75698	122891875	NM_029389.2	3110001K24Rik	NP_083665.2	ILMN_1246371	000010403	S	184	AAGAGGCGCGGGGCAAATCCCGACTCATCCCGAATCCGACTGTTGAGGAA	14	-	35123456-35123505	14qB	Mus musculus RIKEN cDNA 3110001K24 gene (3110001K24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_204934	ILMN_237332	TOX	XM_974229.1	XM_974229.1		252838	94371490	XM_974229.1	Tox	XP_979323.1	ILMN_1231680	004640243	S	1620	TGAGGCAGTGAAGCCCTATGGTGTGTGAGTAGGGAGTGAGGATGGGTCAG				4qA1	PREDICTED: Mus musculus thymocyte selection-associated HMG box gene, transcript variant 4 (Tox), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216817	ILMN_216817	TIMD2	scl0171284.1_49				34328515	NM_134249	Timd2		ILMN_2773415	001240255	S	996	GACCAGATGTGAAGACCAGGTCTACATTATTGAAGACACTCCTTACCCCG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198844	ILMN_198844	LOC209786	XM_146175.2	XM_146175.2			38089038	XM_146175.2	LOC209786		ILMN_1235453	002260524	S	1051	CAGCATGATAACCACAAACCCCAGTTGTCTAGAGGCCAGCCCAGGAACAC										
Mus musculus	RefSeq	ILMN_219693	ILMN_219693	ORMDL3	NM_025661.3	NM_025661.3		66612	146135062	NM_025661.3	Ormdl3	NP_079937.1	ILMN_2712280	004390564	S	1810	TGTCTCTCCACTCGCTGGGTCGACTGGGGCATGTTCCTTTGGAAACGCGT				11qD	Mus musculus ORM1-like 3 (S. cerevisiae) (Ormdl3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			2810011N17Rik; AI315223	2810011N17Rik; AI315223
Mus musculus	Riken	ILMN_203497	ILMN_203497	C430005L07RIK	ri|C430005L07|PX00078G16|AK049416|4430					AK049416	C430005L07Rik		ILMN_1231989	002360093	S	4129	GTTGAGTCCTTGATTCCACTCAGCCATGCAGAGAATTTAGTCCATTTACA										
Mus musculus	RefSeq	ILMN_259025	ILMN_259025	AKR1C19	NM_001013785.2	NM_001013785.2		432720	142371628	NM_001013785.2	Akr1c19	NP_001013807.1	ILMN_3160292	002070692	S	1124	GCCTGACAACCCTCCTTCAGCCAGAGCTGTGTCCACCAGTCCGGAACATA	13	+	4247487-4247536	13qA1	Mus musculus aldo-keto reductase family 1, member C19 (Akr1c19), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1810010N06Rik	1810010N06Rik
Mus musculus	RefSeq	ILMN_201291	ILMN_201291	LOC382381	XM_356472.1	XM_356472.1			38090612	XM_356472.1	LOC382381		ILMN_1230541	005260022	S	563	GTGAGAAGCGAGGACACCCGCAAAATAGGGTGGCTACACCTCCAAGTTCC										
Mus musculus	RefSeq	ILMN_209041	ILMN_209041	GCM1	NM_008103.3	NM_008103.3		14531	118130983	NM_008103.3	Gcm1	NP_032129.2	ILMN_2591993	001450376	S	1579	CATAGCCTGAGAGGAATGTTGGAATCAATTGTGACAAGCAGTAGACAAGG	9	+	77912976-77913025	9qE1	Mus musculus glial cells missing homolog 1 (Drosophila) (Gcm1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	The commitment of a cells to a specific astrocyte fate and its restriction to develop only into an astrocyte [goid 60018] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]	GCMa; Gcm1-rs1; Gcm-rs2; glide	GCMa; Gcm1-rs1; Gcm-rs2; glide
Mus musculus	RefSeq	ILMN_197972	ILMN_251480	RTP2	NM_001008230.3	NM_001008230.3		224055	118131119	NM_001008230.3	Rtp2	NP_001008231.1	ILMN_2530023	001940521	S	337	GCCCAGCGTGTTGGCTCAGTGCGCATGCGCGTGTTCAAGCAGCTGTGCTA	16	-	23927675-23927724	16qB1	Mus musculus receptor transporter protein 2 (Rtp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Gm605; MGC56957	Gm605; MGC56957
Mus musculus	RefSeq	ILMN_251480	ILMN_251480	RTP2	NM_001008230.3	NM_001008230.3		224055	118131119	NM_001008230.3	Rtp2	NP_001008231.1	ILMN_2855019	003360750	S	1929	CCCTAGAGCCAGCCTTCCATACTTCACTACCAAAACATTGGCTGCTTTTC	16	-	23926083-23926132	16qB1	Mus musculus receptor transporter protein 2 (Rtp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Gm605; MGC56957	Gm605; MGC56957
Mus musculus	MEEBO	ILMN_209983	ILMN_209983	MAPK1	scl0001776.1_145	NM_011949.2			27370563	NM_011949.2	Mapk1		ILMN_2649828	000060609	S	1104	CCTCACAAGAGGATTGAAGTTGAACAGGCTCTGGCCCACCCATACCTGGA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IGI]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IDA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IDA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives [goid 19858] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IDA]	Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IMP]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IDA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IMP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 16908] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223164	ILMN_223164	OLFR924	NM_207560.1	NM_207560.1		404322	46430571	NM_207560.1	Olfr924	NP_997443.1	ILMN_2760135	000020609	S	868	GGAACAAGGATGTAAAGAATGCACTGAAAAAGATGGTTGGTGGAAGGCAG	9	+	38656568-38656617	9qA5.1	Mus musculus olfactory receptor 924 (Olfr924), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-47	MOR171-47
Mus musculus	RefSeq	ILMN_200499	ILMN_200499	LOC381743	XM_355728.1	XM_355728.1			38082801	XM_355728.1	LOC381743		ILMN_2538990	006020307	S	226	TTGGCGGCTGTGCTCCTAAACAACGTTGTGGTGGAGAGGTTGAACCTGCA										
Mus musculus	Riken	ILMN_202222	ILMN_202222	4833420G17RIK	ri|4833420G17|PX00028K10|AK014735|979					AK014735	4833420G17Rik		ILMN_1242705	002650646	S	313	CAGGTGCAGAACAACTTCGCAGCCCACAGCCGCCGTCCATGCTGAGAAGG										
Mus musculus	RefSeq	ILMN_219149	ILMN_219149	UBE2T	NM_026024.2	NM_026024.2		67196	141803208	NM_026024.2	Ube2t	NP_080300.1	ILMN_2704919	003190403	S	968	GTATCCTTACAAAAGACCTTGTATGTTTACGAATTCTGCCATGCAGCGAT	1	+	136870603-136870652	1qE4	Mus musculus ubiquitin-conjugating enzyme E2T (putative) (Ube2t), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	C80607; 2700084L22Rik	C80607; 2700084L22Rik
Mus musculus	RefSeq	ILMN_222559	ILMN_222559	5730577I03RIK	NM_175110.2	NM_175110.2		66662	31341180	NM_175110.2	5730577I03Rik	NP_780319.1	ILMN_2794628	003180360	S	2108	GCTCCCCCTGGAGCCATGTGATGTCACAAATATGAAAGCCCTACTTGCTG	9	+	20367432-20367481	9qA3	Mus musculus RIKEN cDNA 5730577I03 gene (5730577I03Rik), mRNA.					
Mus musculus	MEEBO	ILMN_211094	ILMN_211094	4930506L13RIK	scl19111.1_11	NM_030188.2			31560033	NM_030188.2	4930506L13Rik		ILMN_2612462	001660224	S	2773	TTAGTATCTTCAGAAAGGGAAGTACATTTTATTCTATTTGACATTATCAA										
Mus musculus	MEEBO	ILMN_218686	ILMN_218686	BAG5	scl42032.3_211	XM_127149.3			38073751	XM_127149.3	Bag5		ILMN_2698967	003840615	S	1864	GGAACACGAAAAAGGCAGCATTCCTAAGTTTTAAATGGGTTGTGCAAGCA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192132	ILMN_192132	ARL10C	scl29666.8_123				31541913	NM_026011	Arl10c		ILMN_2589999	004200020	S	2702	GGAAAGACGCAGACCTTTGGACTCGAGTGGGAAGATAATCACTCTGGAAA										
Mus musculus	MEEBO	ILMN_192132	ILMN_192132	ARL10C	scl29666.8_123				31541913	NM_026011	Arl10c		ILMN_1233167	000060441	S	1	GGCCAGGCACTCTAATGTCACCGAACACACACTCTCTTCTTAGCCCCAAG										
Mus musculus	RefSeq	ILMN_209839	ILMN_209839	SLC44A2	NM_152808.2	NM_152808.2		68682	118130134	NM_152808.2	Slc44a2	NP_690021.1	ILMN_2681601	003840600	S	182	CTGTGTGTTGCTCTTCCTGGCCATCGTAGGCTATGTGGCTGTGGGCATCA	9	+	21146244-21146293	9qA3	Mus musculus solute carrier family 44, member 2 (Slc44a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1110028E10Rik	1110028E10Rik
Mus musculus	RefSeq	ILMN_209839	ILMN_209839	SLC44A2	NM_152808.2	NM_152808.2		68682	118130134	NM_152808.2	Slc44a2	NP_690021.1	ILMN_1232195	004220538	S	1590	GCTTTTGGCTCCCTTATCTTAGCCATCGTGCAGATCATCCGAGTGATGCT	9	+	21151498-21151547	9qA3	Mus musculus solute carrier family 44, member 2 (Slc44a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1110028E10Rik	1110028E10Rik
Mus musculus	RefSeq	ILMN_209839	ILMN_209839	SLC44A2	NM_152808.2	NM_152808.2		68682	118130134	NM_152808.2	Slc44a2	NP_690021.1	ILMN_2599719	002190632	S	3373	GCCCAGCCCTGTGCTTATGTAATTGCATTCCGGCCAGTTAATAAAGTGCC	9	+	21159410-21159459	9qA3	Mus musculus solute carrier family 44, member 2 (Slc44a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		1110028E10Rik	1110028E10Rik
Mus musculus	RefSeq	ILMN_218891	ILMN_218891	LRRK1	NM_146191.3	NM_146191.3		233328	56699426	NM_146191.3	Lrrk1	NP_666303.3	ILMN_2701515	006550647	S	6870	CAAGAGTCATGGCCGGAAAGCCCAGTGCAAGGGTCCCTGGTCTCCCTTTA	7	-	73404167-73404216	7qC	Mus musculus leucine-rich repeat kinase 1 (Lrrk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	mKIAA1790; MGC28646; D130026O16Rik; C230002E15Rik; AW319595	mKIAA1790; MGC28646; D130026O16Rik; C230002E15Rik; AW319595
Mus musculus	RefSeq	ILMN_205619	ILMN_218891	LRRK1	NM_146191.3	NM_146191.3		233328	56699426	NM_146191.3	Lrrk1	NP_666303.3	ILMN_1219777	006110196	S	3485	AGACCATCTACTGGCAGGAAGGGCTGCTGGTCACTTTCGATGGGGGCTAC	7	-	73427064-73427113	7qC	Mus musculus leucine-rich repeat kinase 1 (Lrrk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	mKIAA1790; MGC28646; D130026O16Rik; C230002E15Rik; AW319595	mKIAA1790; MGC28646; D130026O16Rik; C230002E15Rik; AW319595
Mus musculus	RefSeq	ILMN_237104	ILMN_237104	CAMK2D	NM_001025438.1	NM_001025438.1		108058	70906476	NM_001025438.1	Camk2d	NP_001020609.1	ILMN_3044195	001580397	I	1905	CCCTGTATTCCAAATGGGAAAGAGAACTTCTCAGGAGGCACCTCTTTGTG	3	+	126544407-126544456	3qG1-qG2	Mus musculus calcium/calmodulin-dependent protein kinase II, delta (Camk2d), transcript variant 2, mRNA.	Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII
Mus musculus	RefSeq	ILMN_237104	ILMN_237104	CAMK2D	NM_001025438.1	NM_001025438.1		108058	70906476	NM_001025438.1	Camk2d	NP_001020609.1	ILMN_3119478	004060477	A	4213	GTCCTGCCCTGGTCTCCTTCAATAAACAACTTGCAGTCTGTGATCATGGC	3	+	126547899-126547948	3qG1-qG2	Mus musculus calcium/calmodulin-dependent protein kinase II, delta (Camk2d), transcript variant 2, mRNA.	Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII
Mus musculus	RefSeq	ILMN_193048	ILMN_237104	CAMK2D	NM_001025438.1	NM_001025438.1		108058	70906476	NM_001025438.1	Camk2d	NP_001020609.1	ILMN_1222123	003190468	S	1998	CAACAGTGCCACTTCTTCATTCTGTCCTCAAGGCACCAGGCGGGTGATCC	3	+	126545684-126545733	3qG1-qG2	Mus musculus calcium/calmodulin-dependent protein kinase II, delta (Camk2d), transcript variant 2, mRNA.	Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII
Mus musculus	RefSeq	ILMN_184373	ILMN_237104	CAMK2D	NM_001025438.1	NM_001025438.1		108058	70906476	NM_001025438.1	Camk2d	NP_001020609.1	ILMN_2418116	005960048	S	1938	GGAGGCACCTCTTTGTGGCAAAACATCTGAAAACCATTCACATTTGGGTC	3	+	126544440-126544469:126544470-126544489	3qG1-qG2	Mus musculus calcium/calmodulin-dependent protein kinase II, delta (Camk2d), transcript variant 2, mRNA.	Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [evidence TAS]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IMP]	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII	8030469K03Rik; 2810011D23Rik; MGC60852; mKIAA4163; KIAA4163; [d]-CaMKII
Mus musculus	Riken	ILMN_204856	ILMN_204856	A130075K10RIK	ri|A130075K10|PX00124H04|AK038065|2089					AK038065	A130075K10Rik		ILMN_1249190	006450747	S	1640	AGCTAGCCAGCATCCTTCCCTGCAGTCCATTCATTTCATGCTGGGACTAC										
Mus musculus	MEEBO	ILMN_219006	ILMN_219006	THAP7	scl48706.4_308	NM_026909.1			28076918	NM_026909.1	Thap7		ILMN_2702997	000270376	S	874	AAGCGAGCACAGGCAGATGCCCGCCAGACTCTGAAGGACCATGTACAGGA						A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211356	ILMN_211356	PYGL	NM_133198.1	NM_133198.1		110095	18875341	NM_133198.1	Pygl	NP_573461.1	ILMN_2859847	001030142	S	2526	CGGATCTGAAGATTTCCCTATCCAACGAGTCCAGCAATGGGGTTAGTGCC	12	-	71291981-71292030	12qC2	Mus musculus liver glycogen phosphorylase (Pygl), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate. The name should be qualified in each instance by adding the name of the natural substrate, e.g. maltodextrin phosphorylase, starch phosphorylase, glycogen phosphorylase [goid 4645] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate [goid 8184] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211356	ILMN_211356	PYGL	NM_133198.1	NM_133198.1		110095	18875341	NM_133198.1	Pygl	NP_573461.1	ILMN_2615015	003310333	S	2147	GGGGAGGAGAACCTGTTCATCTTTGGCATGAGAGTAGATGATGTGGCTGC	12	-	71296505-71296554	12qC2	Mus musculus liver glycogen phosphorylase (Pygl), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate. The name should be qualified in each instance by adding the name of the natural substrate, e.g. maltodextrin phosphorylase, starch phosphorylase, glycogen phosphorylase [goid 4645] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate [goid 8184] [evidence IDA]		
Mus musculus	RefSeq	ILMN_215351	ILMN_215351	ATP6V0A1	NM_016920.2	NM_016920.2		11975	77539453	NM_016920.2	Atp6v0a1	NP_058616.1	ILMN_1256334	002120471	S	2622	CACTGGGACTGGCTTCAAGTTCCTCCCCTTCTCCTTTGAGCACATTCGGG	11	+	100923650-100923699	11qD	Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A1 (Atp6v0a1), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]	Atp6n1; Vpp1; Atpv0a1; Vpp-1; Atp6n1a; ATP6a1; AA959968	Atp6n1; Vpp1; Atpv0a1; Vpp-1; Atp6n1a; ATP6a1; AA959968
Mus musculus	RefSeq	ILMN_217245	ILMN_217245	GSTA3	NM_010356.3	NM_010356.3		14859	116325995	NM_010356.3	Gsta3	NP_034486.2	ILMN_3138685	005550075	A	1241	AGAGCAATTGATTTCCCTGGGGCTGCATGAATGATGGATACAGCAGGGAC	1	+	21255526-21255575	1qA4	Mus musculus glutathione S-transferase, alpha 3 (Gsta3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]	Gst2-3	Gst2-3
Mus musculus	RefSeq	ILMN_217245	ILMN_217245	GSTA3	NM_010356.3	NM_010356.3		14859	116325995	NM_010356.3	Gsta3	NP_034486.2	ILMN_1241437	003780193	S	875	GCGTCTGTGTCAATTCAGGTAGACATGACTGACGAGGAACGGCCGGATGC	1	+	21255160-21255209	1qA4	Mus musculus glutathione S-transferase, alpha 3 (Gsta3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]	Gst2-3	Gst2-3
Mus musculus	RefSeq	ILMN_191940	ILMN_322595	LOC100047007	XR_033124.1	XR_033124.1		100047007	149249462	XR_033124.1	LOC100047007		ILMN_2483578	004830598	S	2756	CTATGTACTACTGTATAGACAGAGGCTTTCTTGTAAGAGTTGAAGAGTTC					PREDICTED: Mus musculus similar to DnaJ (Hsp40) homolog, subfamily C, member 10 (LOC100047007), misc RNA.					
Mus musculus	RefSeq	ILMN_219074	ILMN_219074	E130309D02RIK	NM_172726.3	NM_172726.3		231868	142354463	NM_172726.3	E130309D02Rik	NP_766314.2	ILMN_1251585	003440170	S	1658	TCCCAGACCAAGGAAGCCCTTGGAGAGAGGGATGCTGGCCCCGTGGACAA	5	-	144063386-144063435	5qG2	Mus musculus RIKEN cDNA E130309D02 gene (E130309D02Rik), mRNA.				A630028N22	A630028N22
Mus musculus	RefSeq	ILMN_260366	ILMN_260366	TAAR4	NM_001008499.1	NM_001008499.1		209513	56606069	NM_001008499.1	Taar4	NP_001008499.1	ILMN_3008486	006760044	S	530	GTGCTGAGGATTTTGTCGCAGCCATTGACTGTACAGGTTTGTGTGTGTTG	10	+	23680829-23680878	10qA4	Mus musculus trace amine-associated receptor 4 (Taar4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence ISA];  [goid 1594] [evidence ISA]	Gm226; Ta2	Gm226; Ta2
Mus musculus	RefSeq	ILMN_199005	ILMN_260366	TAAR4	NM_001008499.1	NM_001008499.1		209513	56606069	NM_001008499.1	Taar4	NP_001008499.1	ILMN_1235634	005270041	S	689	CCAGGCAGATTGGTACAGGTCCTAGGACAAAACAGGCCCTCTCAGAAAGC	10	+	23680988-23681037	10qA4	Mus musculus trace amine-associated receptor 4 (Taar4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence ISA];  [goid 1594] [evidence ISA]	Gm226; Ta2	Gm226; Ta2
Mus musculus	Riken	ILMN_203766	ILMN_203766	A130056J21RIK	ri|A130056J21|PX00123P13|AK037856|2622					AK037856	A130056J21Rik		ILMN_1249401	006580070	S	2272	AGGAAGAAGCGTCCCTCATAGCTGGCTGAAAGCCAGGGCCTCTCTGAGGA										
Mus musculus	Riken	ILMN_202261	ILMN_202261	PDCL	ri|1200011E13|R000009K15|AK004704|3057					AK004704	Pdcl		ILMN_1231970	005390279	S	873	TCCTGACTGGAATCTGCTGTGTGGGAGAGAGGCACCATGACAACCCTGGA							A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]			
Mus musculus	RefSeq	ILMN_212615	ILMN_212615	HCK	NM_010407.3	NM_010407.3		15162	34734055	NM_010407.3	Hck	NP_034537.2	ILMN_1213268	006330079	S	1955	GCCTGGAATGACTGAATTCAATCTATAGCTGTGATTTAAGTGGAAACTGT	2	+	152977080-152977129	2qH1	Mus musculus hemopoietic cell kinase (Hck), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IGI]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	Hck-1; AI849071; Bmk; MGC18625	Hck-1; AI849071; Bmk; MGC18625
Mus musculus	MEEBO	ILMN_213630	ILMN_213630	POLR2E	scl37743.3.1_54	XM_282920.1			28497749	XM_282920.1	Polr2e		ILMN_2709446	003930086	S	661	AGCTACCCAGAATCCAGGCCGGGGACCCAGTGGCACGGTACTTTGGGATC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222531	ILMN_251705	PTPN6	NM_001077705.1	NM_001077705.1		15170	118130784	NM_001077705.1	Ptpn6	NP_001071173.1	ILMN_1220996	004060240	S	2038	CAGAGGCTTCCACCCGATAGACTGAGACCTGTGGCCCTCACCAGACCCTA	6	-	124674980-124675029	6qF2	Mus musculus protein tyrosine phosphatase, non-receptor type 6 (Ptpn6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein [goid 42105] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2924] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50732] [evidence IMP]; Any process that modulates the frequency, rate or extent of B cell differentiation [goid 45577] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence IDA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	motheaten; Hcph; hcp; me; Ptp1C; SHP-1	motheaten; Hcph; hcp; me; Ptp1C; SHP-1
Mus musculus	RefSeq	ILMN_219333	ILMN_219333	AP3S2	NM_009682.2	NM_009682.2		11778	40538813	NM_009682.2	Ap3s2	NP_033812.2	ILMN_2922544	006100753	S	5378	GTAAGTGACATGGCCAAGGGATGAGAGTAAAGGACAGCCTGGGCAAGGGC	7	-	87020548-87020597	7qD3	Mus musculus adaptor-related protein complex 3, sigma 2 subunit (Ap3s2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	[s]3B	[s]3B
Mus musculus	RefSeq	ILMN_219333	ILMN_219333	AP3S2	NM_009682.2	NM_009682.2		11778	40538813	NM_009682.2	Ap3s2	NP_033812.2	ILMN_1244074	006660600	S	3244	GAGAGAGGCTGTCTTTGCTCCACTGTCTTTGACCATCCCTGACAGTGCTC	7	-	87022682-87022731	7qD3	Mus musculus adaptor-related protein complex 3, sigma 2 subunit (Ap3s2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	[s]3B	[s]3B
Mus musculus	Riken	ILMN_205126	ILMN_205126	E130307L24RIK	ri|E130307L24|PX00209E17|AK053767|2260					AK053767	E130307L24Rik		ILMN_2570188	006280100	S	2051	CAGTTGGCTCTGCTCACAAGGGACAACAAATCCTTGTCAGGGTGGCCCTC										
Mus musculus	Riken	ILMN_204915	ILMN_204915	C130094K23RIK	ri|C130094K23|PX00172L16|AK048654|2189					AK048654	C130094K23Rik		ILMN_1216474	001300291	S	2028	GGGGCAACCGTAGGCTGGGAGTGACCCTTGAGAGATGCACACACTTCTGG										
Mus musculus	RefSeq	ILMN_209683	ILMN_209683	MOSC2	NM_133684.2	NM_133684.2		67247	31559986	NM_133684.2	Mosc2	NP_598445.1	ILMN_2970788	000070468	S	1819	CATGGAGCCGAGTTAGCTCTCTTACAGCTGTGTGGTTCCATTGTCATTAA	1	-	186513870-186513919	1qH5	Mus musculus MOCO sulphurase C-terminal domain containing 2 (Mosc2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with molybdenum (Mo) ions [goid 30151] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	2810484M10Rik	2810484M10Rik
Mus musculus	RefSeq	ILMN_213015	ILMN_213015	ORMDL1	NM_145517.3	NM_145517.3		227102	141803365	NM_145517.3	Ormdl1	NP_663492.2	ILMN_2632647	006400202	S	1705	GAGTGAAGACAGTTGTCAACCAACTTACAAATCGATTGTGGCAATACACA	1	+	53366966-53367015	1qC1.1	Mus musculus ORM1-like 1 (S. cerevisiae) (Ormdl1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			C730042F17Rik	C730042F17Rik
Mus musculus	Riken	ILMN_204333	ILMN_204333	6030439I24RIK	ri|6030439I24|PX00057M11|AK031487|2398					AK031487	6030439I24Rik		ILMN_1221125	004150730	S	2263	GCTACAGCTTTCCTCTTAGTGCACATTCATGGCTCTCCATGATGCCTGCC										
Mus musculus	MEEBO	ILMN_209731	ILMN_209731	SLAMF8	scl15915.6.1_231	XM_129596.2			38074112	XM_129596.2	Slamf8		ILMN_2598622	002340044	S	1473	AAATTGAGATTACAGATGATGAGGGGTTGGTAGCTAATGTGCCATGTTGG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_209466	ILMN_209466	OLFR153	NM_206823.1	NM_206823.1		110511	45592941	NM_206823.1	Olfr153	NP_996559.1	ILMN_1242718	005390347	S	668	CAGTCTTAAAAATCCGTTCAACTGAAGGGAGGTTCAAAGCTTTCTCCACC					Mus musculus olfactory receptor 153 (Olfr153), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	V5; MOR177-5; Olfr4-2; GA_x6K02T2Q125-49033418-49034341	V5; MOR177-5; Olfr4-2; GA_x6K02T2Q125-49033418-49034341
Mus musculus	RefSeq	ILMN_221812	ILMN_221812	PAPOLB	NM_019943.2	NM_019943.2		56522	78000206	NM_019943.2	Papolb	NP_064327.1	ILMN_1221282	005570730	S	2234	CAGGAAACACCTGGGAACAGATAAGCCCGGTATCCCTGTTTTTCCTAGAG	5	-	143003747-143003796	5qG2	Mus musculus poly (A) polymerase beta (testis specific) (Papolb), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The enzymatic addition of a sequence of adenylyl residues at the 3' end of an RNA molecule [goid 43631] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group [goid 4652] [evidence ISS]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	Paplob; Tpap; Papt; Papola-ps; Plap-ps; PAP	Paplob; Tpap; Papt; Papola-ps; Plap-ps; PAP
Mus musculus	RefSeq	ILMN_209512	ILMN_209512	LDOC1L	NM_177630.3	NM_177630.3		223732	110681692	NM_177630.3	Ldoc1l	NP_808298.2	ILMN_2596499	000610315	S	4290	CGATCCTAGCTCACCGTGAGTCGTTTCACACCAAGTGACTGCATTTCCTC	15	-	84383914-84383963	15qE2	Mus musculus leucine zipper, down-regulated in cancer 1-like (Ldoc1l), mRNA.				Mart6; Mar6; BC058638; MGC73499	Mart6; Mar6; BC058638; MGC73499
Mus musculus	Riken	ILMN_206210	ILMN_206210	C130043P10RIK	ri|C130043P10|PX00169C14|AK081571|1434					AK081571	C130043P10Rik		ILMN_1219739	005700445	S	1122	GTGGCTTACAGTCATGTGTGACTCTCTCGTCTGTCCTCCAGGGACACTGC										
Mus musculus	RefSeq	ILMN_187825	ILMN_226970	NDUFB2	NM_026612.1	NM_026612.1		68198	13386095	NM_026612.1	Ndufb2	NP_080888.1	ILMN_2636435	001260370	S	346	CGAGGACTGACACTATAAACTCTCTGGACGAGTAGGAGCAAGGTGAGACA	6	+	39527943-39527947:39527948-39527972:39528999-39529018	6qB1	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2 (Ndufb2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		AGGG; 8kDa; AI325567; 1810011O01Rik	AGGG; 8kDa; AI325567; 1810011O01Rik
Mus musculus	RefSeq	ILMN_188696	ILMN_188696	TRIM45	NM_194343.1	NM_194343.1		229644	39930548	NM_194343.1	Trim45	NP_919324.1	ILMN_2454919	001850440	S	1931	CGGGCCGTCCACACTGGTCTTGCTGTGGGAAGTTCATTGAGAAGTCCGAG	3	+	100729221-100729270	3qF2.2	Mus musculus tripartite motif-containing 45 (Trim45), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921530N01Rik	4921530N01Rik
Mus musculus	RefSeq	ILMN_188696	ILMN_188696	TRIM45	NM_194343.1	NM_194343.1		229644	39930548	NM_194343.1	Trim45	NP_919324.1	ILMN_2983641	006400326	S	4325	GTATTGTCTTACATCTGCTGTACTGGACTCTGAGCTCCGCGAGGGCAGGG	3	+	100735744-100735793	3qF2.2	Mus musculus tripartite motif-containing 45 (Trim45), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921530N01Rik	4921530N01Rik
Mus musculus	RefSeq	ILMN_188696	ILMN_188696	TRIM45	NM_194343.1	NM_194343.1		229644	39930548	NM_194343.1	Trim45	NP_919324.1	ILMN_1237001	004640719	S	3951	ATTCTGCTCGGTGCCTCCAGTGACCGCTCGCTCATCTCAGAACAGAGGCA	3	+	100735407-100735456	3qF2.2	Mus musculus tripartite motif-containing 45 (Trim45), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921530N01Rik	4921530N01Rik
Mus musculus	RefSeq	ILMN_248058	ILMN_248058	GGNBP1	NM_027544.1	NM_027544.1		70772	54400750	NM_027544.1	Ggnbp1	NP_081820.1	ILMN_2960522	002000603	S	1270	TGGAGGAGATGGACGAGATGGGAAACTGGCCCCCTCCAGATTGAGGCCCG	17	+	27167734-27167745:27168062-27168099	17qA3.3	Mus musculus gametogenetin binding protein 1 (Ggnbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220372	ILMN_248058	GGNBP1	NM_027544.1	NM_027544.1		70772	54400750	NM_027544.1	Ggnbp1	NP_081820.1	ILMN_2721198	000060100	S	1460	GCACTGTCCCTACCCGTCAGACTCCTGCAGATGACGTTATTAATAAAAGC	17	+	27168240-27168289	17qA3.3	Mus musculus gametogenetin binding protein 1 (Ggnbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_201553	ILMN_201553	SSTY1	NM_009220.1	NM_009220.1		20611	6678044	NM_009220.1	Ssty1	NP_033246.1	ILMN_2771020	003370678	S	61	ACCCCAACTTGTTCCTCAAGCTTTTGTGCCCTGGTCTGTATCAAAAGACA	Y|NT_161904.2	-	34251-34300		Mus musculus spermiogenesis specific transcript on the Y 1 (Ssty1), mRNA.		The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]		Ssty; Smy	Ssty; Smy
Mus musculus	RefSeq	ILMN_211678	ILMN_256415	D130043K22RIK	NM_001081051.1	NM_001081051.1		210108	124486675	NM_001081051.1	D130043K22Rik	NP_001074520.1	ILMN_1218920	006220082	S	4722	GCAGGACCCAGAGCAATGGACTGGAGCTAATTGCAGCCTGAGATGTTGAC	13	+	24992884-24992933	13qA3.1	Mus musculus RIKEN cDNA D130043K22 gene (D130043K22Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4930451E12Rik	4930451E12Rik
Mus musculus	Riken	ILMN_203865	ILMN_203865	A630002D19RIK	ri|A630002D19|PX00144K07|AK041330|2746					AK041330	A630002D19Rik		ILMN_1236755	004260403	S	2654	CACCACTGGATAAAAGTGTTGACTCGTACCTGTGACCCCAGCACTCAGGG										
Mus musculus	RefSeq	ILMN_211048	ILMN_211048	CCNB2	NM_007630.2	NM_007630.2		12442	86198317	NM_007630.2	Ccnb2	NP_031656.2	ILMN_2611948	006960537	S	792	TTCTCCAAATATCGAAGACTTTGTTTATATCACAGATAATGCTTACACCA	9	-	70258568-70258617	9qD	Mus musculus cyclin B2 (Ccnb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]		CycB2	CycB2
Mus musculus	Riken	ILMN_206774	ILMN_206774	D930048J18RIK	ri|D930048J18|PX00204G12|AK086738|2007					AK086738	D930048J18Rik		ILMN_1233642	000630669	S	1832	GGAGAGCAGCTTACTGAAACATATCCACGGGATGAGAAAAACCTACCGGC										
Mus musculus	RefSeq	ILMN_213367	ILMN_213367	OLFR389	NM_147009.2	NM_147009.2		259011	110735421	NM_147009.2	Olfr389	NP_667220.2	ILMN_1214044	004290563	S	782	GCCCATCAAGTAATAATTCCACTGTAAAAGAGAGTGCCATGGCTATGATG	11	-	73589996-73590045	11qB4	Mus musculus olfactory receptor 389 (Olfr389), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	RP23-180L15.4; MOR135-6	RP23-180L15.4; MOR135-6
Mus musculus	RefSeq	ILMN_215209	ILMN_215209	RNGTT	NM_011884.2	NM_011884.2		24018	101943952	NM_011884.2	Rngtt	NP_036014.1	ILMN_2773302	001500338	S	3799	GTGACGTAATCATTGGCCTTAAAAGCAGACCCCATGTAGTCCCCAACCGC	4	+	33589231-33589280	4qA5	Mus musculus RNA guanylyltransferase and 5'-phosphatase (Rngtt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript [goid 6370] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5'-phosphopolynucleotide + H2O = polynucleotide + phosphate [goid 4651] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: GTP + (5')pp-Pur-mRNA = diphosphate + G(5')ppp-Pur-mRNA; G(5')ppp-Pur-mRNA is mRNA containing a guanosine residue linked 5' through three phosphates to the 5' position of the terminal residue [goid 4484] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	AU020997	AU020997
Mus musculus	RefSeq	ILMN_215209	ILMN_215209	RNGTT	NM_011884.2	NM_011884.2		24018	101943952	NM_011884.2	Rngtt	NP_036014.1	ILMN_2750669	005900025	S	256	GATAGTCAAGTTGCTGAAGAAAACCGGTTCCATCCCAGTATGCTCTCAAA	4	+	33407535-33407584	4qA5	Mus musculus RNA guanylyltransferase and 5'-phosphatase (Rngtt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript [goid 6370] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5'-phosphopolynucleotide + H2O = polynucleotide + phosphate [goid 4651] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: GTP + (5')pp-Pur-mRNA = diphosphate + G(5')ppp-Pur-mRNA; G(5')ppp-Pur-mRNA is mRNA containing a guanosine residue linked 5' through three phosphates to the 5' position of the terminal residue [goid 4484] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	AU020997	AU020997
Mus musculus	RefSeq	ILMN_249197	ILMN_249197	FOXP2	NM_053242.4	NM_053242.4		114142	92087053	NM_053242.4	Foxp2	NP_444472.2	ILMN_3140000	007560048	A	6537	CATTCACGTTGCAATGAAAGGGGCTTTCCCCCTCTCCGTCTAAGAACACT	6	+	15391754-15391803	6qA1	Mus musculus forkhead box P2 (Foxp2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IGI]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IGI]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; A behavioral process whose outcome is a relatively long-lasting adaptive behavioral change whereby an organism modifies innate vocalizations to imitate or create new sounds [goid 42297] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	AI449000; D0Kist7; CAG-16; 2810043D05Rik	AI449000; D0Kist7; CAG-16; 2810043D05Rik
Mus musculus	RefSeq	ILMN_210084	ILMN_249197	FOXP2	NM_053242.4	NM_053242.4		114142	92087053	NM_053242.4	Foxp2	NP_444472.2	ILMN_2701613	004220170	S	776	CACCAGCTCTGAAGTAAGCACAGTGGAGCTGCTGCATCTGCAACAACAGC	6	+	15147077-15147126	6qA1	Mus musculus forkhead box P2 (Foxp2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IGI]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IGI]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; A behavioral process whose outcome is a relatively long-lasting adaptive behavioral change whereby an organism modifies innate vocalizations to imitate or create new sounds [goid 42297] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	AI449000; D0Kist7; CAG-16; 2810043D05Rik	AI449000; D0Kist7; CAG-16; 2810043D05Rik
Mus musculus	RefSeq	ILMN_192766	ILMN_252759	NF2	NM_010898.3	NM_010898.3		18016	119709816	NM_010898.3	Nf2	NP_035028.2	ILMN_2611840	001660300	S	802	CGAAGGAAGAACCAGTTACCTTTCACTTCCTGGCCAAATTTTATCCTGAA	11	-	4743582-4743631	11qA1	Mus musculus neurofibromatosis 2 (Nf2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IMP]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells [goid 45216] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	merlin	merlin
Mus musculus	RefSeq	ILMN_184736	ILMN_236699	ITGBL1	NM_145467.1	NM_145467.1		223272	21703925	NM_145467.1	Itgbl1	NP_663442.1	ILMN_2636424	003800139	S	2217	GGCGCTTCCCAGATCACAAGGGCTCTAAACTCACAAGAATCTCTTACAGG	14	+	124373194-124373243	14qE5	Mus musculus integrin, beta-like 1 (Itgbl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	B930011D01Rik	B930011D01Rik
Mus musculus	RefSeq	ILMN_193513	ILMN_319786	A230106D06RIK	XR_031849.1	XR_031849.1		232785	149255124	XR_031849.1	A230106D06Rik		ILMN_2497880	006560646	S	112	TGACTGAAAATCAGCCGGCGCTTGGCCAGATGCGTCGATGGAGGCCCGCA	6	+	47893281-47893330	6qB2.3	PREDICTED: Mus musculus RIKEN cDNA A230106D06 gene (A230106D06Rik), misc RNA.					
Mus musculus	RefSeq	ILMN_221411	ILMN_221411	TARS	NM_033074.3	NM_033074.3		110960	141802320	NM_033074.3	Tars	NP_149065.2	ILMN_1257552	002750411	S	2406	GATCTGGCCAAGTCTTAGAGAATGTTGTAGATGGGGGTTAAGAGAACCAT	15	-	11313598-11313647	15qA1	Mus musculus threonyl-tRNA synthetase (Tars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of coupling threonine to threonyl-tRNA, catalyzed by threonyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6435] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules [goid 43039] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + L-threonyl-tRNA(Thr) [goid 4829] [evidence IEA]; Catalysis of the ligation of two substances via a carbon-oxygen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate, to form aminoacyl-tRNA or a related compound [goid 16876] [evidence IEA]	D15Wsu59e; ThrRS	D15Wsu59e; ThrRS
Mus musculus	RefSeq	ILMN_221411	ILMN_221411	TARS	NM_033074.3	NM_033074.3		110960	141802320	NM_033074.3	Tars	NP_149065.2	ILMN_1239799	005490463	S	2412	GCCAAGTCTTAGAGAATGTTGTAGATGGGGGTTAAGAGAACCATTTAAAG	15	-	11313592-11313641	15qA1	Mus musculus threonyl-tRNA synthetase (Tars), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of coupling threonine to threonyl-tRNA, catalyzed by threonyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6435] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules [goid 43039] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + L-threonyl-tRNA(Thr) [goid 4829] [evidence IEA]; Catalysis of the ligation of two substances via a carbon-oxygen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate, to form aminoacyl-tRNA or a related compound [goid 16876] [evidence IEA]	D15Wsu59e; ThrRS	D15Wsu59e; ThrRS
Mus musculus	RefSeq	ILMN_193327	ILMN_319161	LOC100044165	XM_001471936.1	XM_001471936.1		100044165	149263588	XM_001471936.1	LOC100044165	XP_001471986.1	ILMN_2496163	004180681	S	1228	CGGGATCCCTTGGAGAGACTTCTGGGAGGGGCCCAATAAAGCTTTGTGCA					PREDICTED: Mus musculus hypothetical protein LOC100044165 (LOC100044165), mRNA.					
Mus musculus	RefSeq	ILMN_193327	ILMN_319161	LOC100044165	XM_001471936.1	XM_001471936.1		100044165	149263588	XM_001471936.1	LOC100044165	XP_001471986.1	ILMN_1251089	001570019	S	418	GCTCTGGGGGCAAGGGAGTAAACATCAGCACTTCCCACCTGAAGGAAGCC					PREDICTED: Mus musculus hypothetical protein LOC100044165 (LOC100044165), mRNA.					
Mus musculus	RefSeq	ILMN_220245	ILMN_220245	TEX12	NM_025687.1	NM_025687.1		66654	13385149	NM_025687.1	Tex12	NP_079963.1	ILMN_2719637	001940048	S	741	TTTGATTATGCTTAACAATATTTGTTTAAATAGCAGATGATTTTTGAGAT	9	-	50309261-50309310	9qA5.3	Mus musculus testis expressed gene 12 (Tex12), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence ISS]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5730518K06Rik	5730518K06Rik
Mus musculus	RefSeq	ILMN_193197	ILMN_324653	LOC100046586	XM_001476678.1	XM_001476678.1		100046586	149251701	XM_001476678.1	LOC100046586	XP_001476728.1	ILMN_2494912	006040204	S	1680	CGGGTTACGGGATGGAATTGTTTTCGTCCTTAAATGCTTGGACTTCAGCC					PREDICTED: Mus musculus similar to loop-tail protein 2 (LOC100046586), mRNA.					
Mus musculus	MEEBO	ILMN_192409	ILMN_192409	CUL3	scl16567.16_128				31980661	NM_016716	Cul3		ILMN_2487814	007380008	S	16	TCCTCTGTGCTTCCAACTATCACTGAAGTCTTCTACCTGATTGATCTGCC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyclins, proteins whose levels in a cell varies markedly during the cell cycle, and which play key roles in regulating cell cycle phase transitions [goid 8054] [evidence ISS]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]; The morphogenesis of trophectoderm cells [goid 1831] [evidence IMP]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IMP]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with cyclins, proteins whose levels in a cell varies markedly during the cell cycle, rising steadily until mitosis, then falling abruptly to zero. As cyclins reach a threshold level, they are thought to drive cells into G2 phase and thus to mitosis [goid 30332] [evidence IPI]		
Mus musculus	Riken	ILMN_201857	ILMN_201857	6330404C01RIK	ri|6330404C01|PX00008C19|AK018112|1753					AK018112	6330404C01Rik		ILMN_1245549	002470228	S	1645	ATTAGAGGATGTCCTTTGGACCACCGGAAGGAGGTGTGCCCAGAGCCAAG										
Mus musculus	RefSeq	ILMN_220716	ILMN_220716	BC011426	NM_145490.4	NM_145490.4		224893	110665710	NM_145490.4	BC011426	NP_663465.1	ILMN_1214025	006940446	S	1692	CCGACAAAAACATCCCCTAGCCATCTAAGAAATGAGGAATAACTTTCCAT	17	+	56037988-56038007:56038008-56038037	17qD	Mus musculus cDNA sequence BC011426 (BC011426), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC18740	MGC18740
Mus musculus	RefSeq	ILMN_252125	ILMN_252125	D930028F11RIK	NM_172921.2	NM_172921.2		244853	70778977	NM_172921.2	D930028F11Rik	NP_766509.2	ILMN_3004949	003420750	S	2638	GCCACATTGCTCTTTGCCGATTGGAAGTTAGGATTCCTGTGCCTAAGACC	9	+	48207374-48207423	9qA5.3	Mus musculus RIKEN cDNA D930028F11 gene (D930028F11Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			C130036J11	C130036J11
Mus musculus	MEEBO	ILMN_213824	ILMN_213824	4732460I24	scl33267.8.1_290				51764345	XM_489249	4732460I24		ILMN_2641171	004610601	S	3473	TAGCACAATTTCCCTTAGGGGGCGCTGTTTTGATCCCGAACTGAGTGCCT										
Mus musculus	Riken	ILMN_205225	ILMN_205225	E230014M20RIK	ri|E230014M20|PX00209F14|AK054048|1713					AK054048	E230014M20Rik		ILMN_1234663	005290075	S	1420	CAGCCTGAAGGTTTCAACGTAAAGGCAGTTAGGAAGACCTCAGTGGGGTC										
Mus musculus	RefSeq	ILMN_212926	ILMN_212926	BC003885	NM_198609.2	NM_198609.2		225215	118130848	NM_198609.2	BC003885	NP_941011.1	ILMN_3006534	002320452	S	977	AGCACAGCTTAGTTTTGTTGGGCCGTCTGACCTGCTTCAGCCATTCAGCC	9	+	72970595-72970644	9qD	Mus musculus cDNA sequence BC003885 (BC003885), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC6735	MGC6735
Mus musculus	RefSeq	ILMN_212926	ILMN_212926	BC003885	NM_198609.2	NM_198609.2		225215	118130848	NM_198609.2	BC003885	NP_941011.1	ILMN_2631702	004490326	S	1463	AATTTATGGATAGAATGCTAACTGTTATTTGTACATAAATAAAGCCCTTT	9	+	72971081-72971130	9qD	Mus musculus cDNA sequence BC003885 (BC003885), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC6735	MGC6735
Mus musculus	MEEBO	ILMN_194118	ILMN_194118	COL8A1	scl490.1.1_278				6680973	NM_007739	Col8a1		ILMN_1255925	004210376	S	1967	TCCCGGGGTCTACTACTTTGCTTATCATGTTCACTGCAAGGGAGGCAACG						A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IGI]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_253408	ILMN_253408	AI847670	NM_177869.3	NM_177869.3		330050	61098168	NM_177869.3	AI847670	NP_808537.2	ILMN_2893321	001780615	S	2675	GCAGGGCACTTTGACAGCGGTGTGCTTTAGAGAGTCACTTCATGGATTCC	5	+	20987696-20987745	5qA3	Mus musculus expressed sequence AI847670 (AI847670), mRNA.				4631428I10	4631428I10
Mus musculus	RefSeq	ILMN_220679	ILMN_220679	YRDC	NM_153566.1	NM_153566.1		230734	23956353	NM_153566.1	Yrdc	NP_705794.1	ILMN_2870883	000870048	S	706	GTCGCCTCGGCTCTACTGTGGTTGACTTATCTGTGCCTGGAAAGTTTGGC	4	+	124531201-124531250	4qD2.2	Mus musculus yrdC domain containing (E.coli) (Yrdc), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 51051] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BC023823; IRIP; ITIP; AV303379; MGC38336	BC023823; IRIP; ITIP; AV303379; MGC38336
Mus musculus	MEEBO	ILMN_210762	ILMN_210762	A530017F20	scl23206.5_315				51708071	XM_488999	A530017F20		ILMN_2608886	003830008	S	1476	CCAGGAACTGGGAGTTTTGATCCATCTCCGTATTTTACTGTGCAAGAGCC										
Mus musculus	MEEBO	ILMN_218108	ILMN_218108	1600029I14RIK	scl36571.2.1_160	XM_135038.3			38090015	XM_135038.3	1600029I14Rik		ILMN_2691743	004150301	S	642	TCCAGAGCGCCAATATGTGCTTGGTTTAGCCCTATTCTGTGGACAACGGA										
Mus musculus	MEEBO	ILMN_184882	ILMN_184882	SCL0003522.1_58	scl0003522.1_58	XM_134937.3			38089940	XM_134937.3	scl0003522.1_58		ILMN_2732336	005860164	S	3623	CTGATCTGTACCTGGTAATGACTTTGGGGGGCTGTCCATCACAATGCTGG										
Mus musculus	RefSeq	ILMN_214591	ILMN_214591	KLHDC1	NM_178253.2	NM_178253.2		271005	31342364	NM_178253.2	Klhdc1	NP_839984.1	ILMN_2649635	000460020	S	1732	AGCAGGGAAGCGTGTTTAGTGGTTCTGGCTCCGTCCCGCTATGACTGGGT	12	+	70202349-70202398	12qC2	Mus musculus kelch domain containing 1 (Klhdc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC141301; MGC141300	MGC141301; MGC141300
Mus musculus	RefSeq	ILMN_214591	ILMN_214591	KLHDC1	NM_178253.2	NM_178253.2		271005	31342364	NM_178253.2	Klhdc1	NP_839984.1	ILMN_2843019	002490475	S	1719	CGTCCCCATTGTTGAGCAGGGAAGCGTGTTTAGTGGTTCTGGCTCCGTCC	12	+	70202336-70202385	12qC2	Mus musculus kelch domain containing 1 (Klhdc1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC141301; MGC141300	MGC141301; MGC141300
Mus musculus	MEEBO	ILMN_220402	ILMN_220402	OLFR497	scl32217.1.1_125				22129368	NM_146738	Olfr497		ILMN_2721603	000360711	S	286	CCTACCTTGGATGTGGCATTCAGCAGAGCCTGGCTGATTTCTTTGGGTCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_222985	ILMN_222985	KCNS2	NM_181317.3	NM_181317.3		16539	73532785	NM_181317.3	Kcns2	NP_851834.1	ILMN_2757688	006480202	S	3988	ACTGTTCCCAGTTGCACTGAAGGCAGGGGACAGCCTAACCTGTGAGGACT	15	+	34771720-34771769	15qB3.1	Mus musculus K+ voltage-gated channel, subfamily S, 2 (Kcns2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Kv9.2; E130006J24Rik	Kv9.2; E130006J24Rik
Mus musculus	RefSeq	ILMN_216491	ILMN_216491	SCN1B	NM_011322.2	NM_011322.2		20266	31981505	NM_011322.2	Scn1b	NP_035452.1	ILMN_2834198	000940154	S	1279	TTGATGGGGTCAAGAGGGGTCGGGACAGGGACAGTAGTGGGCAGGAGGTT	7	-	31901729-31901778	7qB1	Mus musculus sodium channel, voltage-gated, type I, beta (Scn1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211696	ILMN_327522	TEKT5	NM_001099275.1	NM_001099275.1		70426	149944430	NM_001099275.1	Tekt5	NP_001092745.1	ILMN_1250633	002140767	S	1170	GCCATTGTGGCCAAGGAATACCCACTGAAGATGGCCCAGACCATGCTAGC				16qA1	Mus musculus tektin 5 (Tekt5), mRNA.				MGC144895; 3300001K11Rik	MGC144895; 3300001K11Rik
Mus musculus	RefSeq	ILMN_201219	ILMN_261451	OMT2B	NM_205822.2	NM_205822.2		382088	145207989	NM_205822.2	Omt2b	NP_991391.2	ILMN_1228818	000780577	S	77	GCCAATCTGAAGATCTTTTGCAGGGAAGGGTGATGATGTCTCAACTTCAC				9qE1	Mus musculus oocyte maturation, beta (Omt2b), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]			AU018149; OM2b; C86230; Mosg	AU018149; OM2b; C86230; Mosg
Mus musculus	RefSeq	ILMN_222374	ILMN_222374	SLC16A4	NM_146136.1	NM_146136.1		229699	22122664	NM_146136.1	Slc16a4	NP_666248.1	ILMN_2856537	005390767	S	1153	CACTTGGGATTGACGTAATGGATGCCTCCTACCTTGTGTCTGTAGCTGGT	3	+	107104091-107104138:107105979-107105980	3qF2.3	Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 4 (Slc16a4), mRNA.				MGC37305; AW146050	MGC37305; AW146050
Mus musculus	MEEBO	ILMN_189179	ILMN_189179	IGHV1S16_K00604_IG_HEAVY_VARIABLE_1S16_234	IGHV1S16_K00604_Ig_heavy_variable_1S16_234						IGHV1S16_K00604_Ig_heavy_variable_1S16_234		ILMN_2459028	003190053	S	20	TGGTGGTACTAACTACAATGAGAAGTTCAAGAGAAAGGCCACACTGACTG										
Mus musculus	RefSeq	ILMN_223000	ILMN_223000	RRAGA	NM_178376.2	NM_178376.2		68441	31560874	NM_178376.2	Rraga	NP_848463.1	ILMN_2757931	001450524	S	1346	CTATCAAGTAGAGATCTTCAAGACGGCCTTTATGAAAAGTTAGTGTGGTG	4	+	86222935-86222984	4qC4	Mus musculus Ras-related GTP binding A (Rraga), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the frequency, rate or extent of the rupture of cell membranes and the loss of cytoplasm [goid 42268] [evidence ISO]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISO]	RAGA; 1300010C19Rik; FIP-1; AI255374	RAGA; 1300010C19Rik; FIP-1; AI255374
Mus musculus	RefSeq	ILMN_223531	ILMN_223531	CCDC56	NM_026618.1	NM_026618.1		52469	21311866	NM_026618.1	Ccdc56	NP_080894.1	ILMN_2932518	004210753	S	401	GCCTGGTGGTCTTACAGCATCACTGGCACACTAACGTCGGACTGTGTGAT	11	-	101094327-101094376	11qD	Mus musculus coiled-coil domain containing 56 (Ccdc56), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			1810033A19Rik; D11Ertd99e; HSPC009	1810033A19Rik; D11Ertd99e; HSPC009
Mus musculus	RefSeq	ILMN_223531	ILMN_223531	CCDC56	NM_026618.1	NM_026618.1		52469	21311866	NM_026618.1	Ccdc56	NP_080894.1	ILMN_2765287	006380521	S	472	ATGCATTTGGCCGCTGCCAAGGGGGGGATTGCTCACTTCACGTGCAGTTT	11	-	101094256-101094305	11qD	Mus musculus coiled-coil domain containing 56 (Ccdc56), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			1810033A19Rik; D11Ertd99e; HSPC009	1810033A19Rik; D11Ertd99e; HSPC009
Mus musculus	RefSeq	ILMN_212208	ILMN_212208	RERG	NM_181988.1	NM_181988.1		232441	32526868	NM_181988.1	Rerg	NP_871788.1	ILMN_1230648	006770050	S	1804	CACTCTACGTGAACGAGCGTGCACAAAGTAGATGCTTGGCTGGCAAAAGG	6	-	137003571-137003620	6qG1	Mus musculus RAS-like, estrogen-regulated, growth-inhibitor (Rerg), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217789	ILMN_217789	HOXB8	NM_010461.2	NM_010461.2		15416	119709819	NM_010461.2	Hoxb8	NP_034591.1	ILMN_2687621	005570731	S	1773	AAGGGTGACAAGAAGTAGGCTCCAGCTGGGACTGCTCGGGCCCGGACTAG	11	+	96145767-96145784:96145785-96145816	11qD	Mus musculus homeo box B8 (Hoxb8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IMP]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process whose specific outcome is the progression of the dorsal region of the spinal cord over time, from its formation to the mature structure. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input [goid 21516] [evidence IMP]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hox-2.4	Hox-2.4
Mus musculus	RefSeq	ILMN_222157	ILMN_222157	BC015286	NM_198171.2	NM_198171.2		234669	142371927	NM_198171.2	BC015286	NP_937814.1	ILMN_2745488	003400356	S	1819	CTGTGTGAAAAACACTCTCTATGTATTCCTTATTATTTTGGGCAAATTCT	8	+	107362476-107362525	8qD3	Mus musculus cDNA sequence BC015286 (BC015286), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Mus musculus	Riken	ILMN_204812	ILMN_204812	C530045P18RIK	ri|C530045P18|PX00083A11|AK049738|2412					AK049738	C530045P18Rik		ILMN_2567803	004200750	S	2177	TTGTCCACTGTGCCAAGTAACAGTCTCTTCTGGTGGGGTTAACAGTGAGG										
Mus musculus	Riken	ILMN_207243	ILMN_207243	F830001A22RIK	ri|F830001A22|PL00004G05|AK089551|1475					AK089551	F830001A22Rik		ILMN_1213279	001440041	S	1127	CTTCCACTACTCCATGCGCTAGCATCTCAGGGACTCTCTACAAGGATTCC										
Mus musculus	Riken	ILMN_201651	ILMN_201651	MKRN1	ri|1110050P23|R000018I08|AK004225|523					AK004225	Mkrn1		ILMN_2543488	002690326	S	204	AGTGGGAACATCAAGCAGATACCGGGTGGGGACGACGAGCTGACAGACTC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]		
Mus musculus	RefSeq	ILMN_212442	ILMN_212442	2310047O13RIK	NM_024185.4	NM_024185.4		66960	70980532	NM_024185.4	2310047O13Rik	NP_077147.2	ILMN_1259004	000830368	S	941	CTCGGTATCCATGAACAAGCAGCTGTAGGATTCTTAACACTAATGGAAGC	2	-	12308251-12308300	2qA1	Mus musculus RIKEN cDNA 2310047O13 gene (2310047O13Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	5830410F13Rik; 1810041E18Rik; AW111958; AI447827; RP23-232K16.1	5830410F13Rik; 1810041E18Rik; AW111958; AI447827; RP23-232K16.1
Mus musculus	RefSeq	ILMN_212442	ILMN_212442	2310047O13RIK	NM_024185.4	NM_024185.4		66960	70980532	NM_024185.4	2310047O13Rik	NP_077147.2	ILMN_1259621	001190059	S	1255	ATTAGATCCAGAAGGACTAGGAATCATATTGTTGGGTCCATTTCTTCAAG	2	-	12276920-12276969	2qA1	Mus musculus RIKEN cDNA 2310047O13 gene (2310047O13Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	5830410F13Rik; 1810041E18Rik; AW111958; AI447827; RP23-232K16.1	5830410F13Rik; 1810041E18Rik; AW111958; AI447827; RP23-232K16.1
Mus musculus	RefSeq	ILMN_212442	ILMN_212442	2310047O13RIK	NM_024185.4	NM_024185.4		66960	70980532	NM_024185.4	2310047O13Rik	NP_077147.2	ILMN_2660362	004830725	S	1927	ATCAAAATGCAGAAGTCAATTTTTGTTAATTTTGTTTTTCATCAGAAATA	2	-	12269247-12269296	2qA1	Mus musculus RIKEN cDNA 2310047O13 gene (2310047O13Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	5830410F13Rik; 1810041E18Rik; AW111958; AI447827; RP23-232K16.1	5830410F13Rik; 1810041E18Rik; AW111958; AI447827; RP23-232K16.1
Mus musculus	MEEBO	ILMN_223885	ILMN_223885	OLFR1133	scl0258348.1_155				22129594	NM_146351	Olfr1133		ILMN_1220383	003290136	S	701	GCAGGCACAAAGCATTTTCCACCTGTGCTTCCCACCTCATGGCTGTGGCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_209656	ILMN_255400	ZFC3H1	NM_001033261.2	NM_001033261.2		216345	90991705	NM_001033261.2	Zfc3h1	NP_001028433.2	ILMN_2597899	005340639	S	6777	AGCAGGGTTGTTGACTGCCCTTTCTACGTTCTGGACTCCTTGCTGAGACT	10	+	114869648-114869697	10qD2	Mus musculus zinc finger, C3H1-type containing (Zfc3h1), mRNA. XM_925322				BC033596; Psrc2	BC033596; Psrc2
Mus musculus	RefSeq	ILMN_209656	ILMN_255400	ZFC3H1	NM_001033261.2	NM_001033261.2		216345	90991705	NM_001033261.2	Zfc3h1	NP_001028433.2	ILMN_1252997	005220164	S	2966	GAAAGCGTTGACTCTGAAGTATGGAGAAGAGCTTGCTCGGGCAAAGGCAG	10	+	114848287-114848336	10qD2	Mus musculus zinc finger, C3H1-type containing (Zfc3h1), mRNA. XM_925322				BC033596; Psrc2	BC033596; Psrc2
Mus musculus	RefSeq	ILMN_192970	ILMN_312576	2310043N10RIK	NR_003513.2	NR_003513.2		66961	149274628	NR_003513.2	2310043N10Rik		ILMN_2493030	001690497	S	3037	GTGTGGAATGGGGAAATGTGAAGAAAGCTGTAACTGCAGGTTGGTCGCAC				19qA	Mus musculus RIKEN cDNA 2310043N10 gene (2310043N10Rik), non-coding RNA.				VINC; Neat1	VINC; Neat1
Mus musculus	RefSeq	ILMN_212883	ILMN_212883	PDXK	NM_172134.1	NM_172134.1		216134	26006860	NM_172134.1	Pdxk	NP_742146.1	ILMN_2924216	001240184	S	2578	CACCCTTTCCCCATTATGATGCCCCAGATGGAGGAGATAGATGCTGGTCC	10	-	77903052-77903101	10qC1	Mus musculus pyridoxal (pyridoxine, vitamin B6) kinase (Pdxk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds [goid 8615] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate [goid 8478] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2310036D04Rik; AA119688; C77999	2310036D04Rik; AA119688; C77999
Mus musculus	RefSeq	ILMN_214598	ILMN_214598	RPL23	NM_022891.2	NM_022891.2		65019	133893219	NM_022891.2	Rpl23	NP_075029.1	ILMN_2742807	001260315	S	414	GCATCCAACGCAGGCAGCATTGCATGATTCTCCAGTGTATTTGTAAAATA	11	-	97639372-97639395:97639396-97639421	11qD	Mus musculus ribosomal protein L23 (Rpl23), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence ISA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	2810009A01Rik	2810009A01Rik
Mus musculus	RefSeq	ILMN_214598	ILMN_214598	RPL23	NM_022891.2	NM_022891.2		65019	133893219	NM_022891.2	Rpl23	NP_075029.1	ILMN_1238227	005080672	S	553	GGGCATGACCTTCATGACCTTGCAGAACTTCTTCACTTTCCAGGTTAAGT	11	-	97639233-97639282	11qD	Mus musculus ribosomal protein L23 (Rpl23), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence ISA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	2810009A01Rik	2810009A01Rik
Mus musculus	RefSeq	ILMN_214598	ILMN_214598	RPL23	NM_022891.2	NM_022891.2		65019	133893219	NM_022891.2	Rpl23	NP_075029.1	ILMN_2685675	000050195	S	888	GCTGGGACCAGGTACACATAACACAGATAAATATTAGAGCAAACCATGCA	11	-	97638898-97638947	11qD	Mus musculus ribosomal protein L23 (Rpl23), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [evidence ISA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]	2810009A01Rik	2810009A01Rik
Mus musculus	RefSeq	ILMN_219698	ILMN_219698	RARS2	NM_181406.2	NM_181406.2		109093	31340970	NM_181406.2	Rars2	NP_852071.1	ILMN_2712332	000840008	S	477	CAAATCTAAAAGAAGCTTTAGGACATCAAGTAACAAGAATAAATTACATT	4	+	34584213-34584262	4qA5	Mus musculus arginyl-tRNA synthetase 2, mitochondrial (Rars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	1500002I10Rik; Rarsl; PRO1992	1500002I10Rik; Rarsl; PRO1992
Mus musculus	RefSeq	ILMN_219698	ILMN_219698	RARS2	NM_181406.2	NM_181406.2		109093	31340970	NM_181406.2	Rars2	NP_852071.1	ILMN_2857581	001980131	S	1410	CCCATGCCCGCCTCTGTAGTTTGGAAGAGACTTTTGGATGTGGGTATCTC	4	+	34603493-34603511:34604017-34604047	4qA5	Mus musculus arginyl-tRNA synthetase 2, mitochondrial (Rars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	1500002I10Rik; Rarsl; PRO1992	1500002I10Rik; Rarsl; PRO1992
Mus musculus	RefSeq	ILMN_219698	ILMN_219698	RARS2	NM_181406.2	NM_181406.2		109093	31340970	NM_181406.2	Rars2	NP_852071.1	ILMN_2857580	002900445	S	1524	GGTTCGATGAGGTACTTTACCTGTCATCTCAGGACCTACAGCCGAAGCAC	4	+	34604112-34604112:34604416-34604464	4qA5	Mus musculus arginyl-tRNA synthetase 2, mitochondrial (Rars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	1500002I10Rik; Rarsl; PRO1992	1500002I10Rik; Rarsl; PRO1992
Mus musculus	RefSeq	ILMN_219698	ILMN_219698	RARS2	NM_181406.2	NM_181406.2		109093	31340970	NM_181406.2	Rars2	NP_852071.1	ILMN_2750676	005220347	S	1465	CTCCAATGTTGCTTGTTTACAAGAGCCGCAGTCTGTTTCAATTCTCCAGC	4	+	34604053-34604102	4qA5	Mus musculus arginyl-tRNA synthetase 2, mitochondrial (Rars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	1500002I10Rik; Rarsl; PRO1992	1500002I10Rik; Rarsl; PRO1992
Mus musculus	RefSeq	ILMN_217032	ILMN_217032	HES2	NM_008236.4	NM_008236.4		15206	146149185	NM_008236.4	Hes2	NP_032262.2	ILMN_2678324	004200397	S	301	CATCCTGGAAATGACTGTGCGCTTCCTACAGGAGCAGCCTGCGACCCTGT				4qE2	Mus musculus hairy and enhancer of split 2 (Drosophila) (Hes2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	HES-2	HES-2
Mus musculus	RefSeq	ILMN_220340	ILMN_229334	A230046K03RIK	NM_001033375.2	NM_001033375.2		319277	126090571	NM_001033375.2	A230046K03Rik	NP_001028547.2	ILMN_2720820	004730475	S	5768	CAGCAAGTTTGTTATCTCACTTGAGTGGGGTTCTCCTTTCCCTTGGCTCA	10	+	83059128-83059177	10qC1	Mus musculus RIKEN cDNA A230046K03 gene (A230046K03Rik), mRNA.				mKIAA1033; AA589518	mKIAA1033; AA589518
Mus musculus	RefSeq	ILMN_196592	ILMN_196592	GSTA1	NM_008181.2	NM_008181.2		14857	61098064	NM_008181.2	Gsta1	NP_032207.2	ILMN_2979237	002940592	S	721	GGCTTTCAAGATTCAGTGAAGCTGCATTGATGGAGCCACAGATACTGGCC	9	+	78090367-78090385:78090386-78090416	9qE1	Mus musculus glutathione S-transferase, alpha 1 (Ya) (Gsta1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence ISA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence ISA]	Gst2-1	Gst2-1
Mus musculus	RefSeq	ILMN_215046	ILMN_215046	MGAT3	NM_010795.3	NM_010795.3		17309	108796646	NM_010795.3	Mgat3	NP_034925.2	ILMN_2654906	003420504	S	4371	GGCCTCATTCACCCAAGGGTCACAGTGGTTAAAAGGGACAAGCTTGTTGA	15	+	80045655-80045704	15qE1	Mus musculus mannoside acetylglucosaminyltransferase 3 (Mgat3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-mannosyl-R = UDP + 4-(N-acetyl-beta-D-glucosaminyl)-beta-D-mannosyl-R [goid 3830] [evidence IEA]	1110038J12Rik; GnT-III; AI848272	1110038J12Rik; GnT-III; AI848272
Mus musculus	RefSeq	ILMN_249224	ILMN_249224	ARL8B	NM_026011.3	NM_026011.3		67166	115292448	NM_026011.3	Arl8b	NP_080287.1	ILMN_2845917	001300750	S	2852	TGCTGGAAGGTGGCTGCCTCAGCTGGCCGAGGTGTTGATGGGATGAACTA	6	+	108773641-108773690	6qE2	Mus musculus ADP-ribosylation factor-like 8B (Arl8b), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	gie1; Arl10c; 3100002J04Rik; 2610313E07Rik	gie1; Arl10c; 3100002J04Rik; 2610313E07Rik
Mus musculus	RefSeq	ILMN_193373	ILMN_236437	HMGN1	NM_008251.3	NM_008251.3		15312	41406073	NM_008251.3	Hmgn1	NP_032277.3	ILMN_2741132	001260274	S	980	GGCATTTGGTTGTTGTGAGAGGTCTTGGGGGAACTTGCCGAGTCACTGGA	16	-	96343365-96343414	16qC4	Mus musculus high mobility group nucleosomal binding domain 1 (Hmgn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence IMP]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [evidence IMP]; The repair of UV-induced T-T, C-T, and C-C dimers by the recognition and removal of the damaged DNA strand from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 720] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-C radiation stimulus. UV-C radiation (UV-C light) spans the wavelengths 100 to 290 nm [goid 10225] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized during post-embryonic development. Morphogenesis pertains to the creation of form [goid 48597] [evidence IMP]; Any process that modulates the frequency, rate or extent of epithelial cell proliferation [goid 50678] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	MGC103397; Hmg14; HMG-14	MGC103397; Hmg14; HMG-14
Mus musculus	RefSeq	ILMN_220214	ILMN_220214	ZFAND6	NM_022985.5	NM_022985.5		65098	146135083	NM_022985.5	Zfand6	NP_075361.2	ILMN_1246120	000020670	S	98	GCATAAAAGTCAAACTTTAAGTAGCTGCTTATGAGGATAGGGAAGGCAGG				7qD3	Mus musculus zinc finger, AN1-type domain 6 (Zfand6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Za20d3; Awp1; 3110005P07Rik	Za20d3; Awp1; 3110005P07Rik
Mus musculus	RefSeq	ILMN_202156	ILMN_220214	ZFAND6	NM_022985.5	NM_022985.5		65098	146135083	NM_022985.5	Zfand6	NP_075361.2	ILMN_1236920	002370070	S	297	GTACGAGGGTTTCCATAAAATCCGCAGCCAGTGGAGCAAAGCATAGGTGC				7qD3	Mus musculus zinc finger, AN1-type domain 6 (Zfand6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Za20d3; Awp1; 3110005P07Rik	Za20d3; Awp1; 3110005P07Rik
Mus musculus	RefSeq	ILMN_220214	ILMN_220214	ZFAND6	NM_022985.5	NM_022985.5		65098	146135083	NM_022985.5	Zfand6	NP_075361.2	ILMN_1243030	002650193	S	1255	TCTCTGCAGCACGATTCCCTTTTGATAAGGCCCTTCTGGGTACAACTAGT				7qD3	Mus musculus zinc finger, AN1-type domain 6 (Zfand6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Za20d3; Awp1; 3110005P07Rik	Za20d3; Awp1; 3110005P07Rik
Mus musculus	MEEBO	ILMN_190163	ILMN_190163	PUM1	scl24889.23_167				13507675	NM_030722	Pum1		ILMN_2467727	007560131	S	3	CGCCACCCCTTGTAAAGTGACTCGCCCTCCGTTTTGTACAGATGAGCTGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210427	ILMN_310627	LOC100044363	XM_001471994.1	XM_001471994.1		100044363	149269900	XM_001471994.1	LOC100044363	XP_001472044.1	ILMN_1247861	001030689	S	2352	AAGCTGGTATCTATGAAGTTCCCATCATTATCACAGATTCAGGGAATCCC					PREDICTED: Mus musculus similar to N-cadherin (LOC100044363), mRNA.					
Mus musculus	RefSeq	ILMN_210427	ILMN_310627	LOC100044363	XM_001471994.1	XM_001471994.1		100044363	149269900	XM_001471994.1	LOC100044363	XP_001472044.1	ILMN_2764136	002750215	S	2580	GGCGGGATAAAGAGCGCCAAGCCAAGCAGCTTTTAATTGACCCAGAAGAT					PREDICTED: Mus musculus similar to N-cadherin (LOC100044363), mRNA.					
Mus musculus	RefSeq	ILMN_210427	ILMN_310627	LOC100044363	XM_001471994.1	XM_001471994.1		100044363	149269900	XM_001471994.1	LOC100044363	XP_001472044.1	ILMN_2605504	005550341	S	447	CTGAAGATGTTTACAGCGCAGTCTTACCGAAGGATGTGCACGAAGGACAG					PREDICTED: Mus musculus similar to N-cadherin (LOC100044363), mRNA.					
Mus musculus	Riken	ILMN_202003	ILMN_202003	DNAJA3	ri|1810053A11|ZX00043K19|AK007852|1468					AK007852	Dnaja3		ILMN_1244825	002970328	S	1136	TGGTTGGGGGTCACCACACCTGTGTTAAAGGAGCTCAGCGTTAGGAAGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IMP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IPI]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IDA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IMP]; The process of apoptosis in activated T cells [goid 6924] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence ISA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The process whereby new strands of DNA are synthesized in the mitochondrion [goid 6264] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IPI]		
Mus musculus	Riken	ILMN_204098	ILMN_204098	CATNAL1	ri|A230035J03|PX00127B07|AK038548|3797					AK038548	Catnal1		ILMN_1221711	006550010	S	3447	CTTGTAAATCAGTGCTCAGGGGATGGAGGCAGGAGGATCGGTGCTCAGGG										
Mus musculus	RefSeq	ILMN_209204	ILMN_209204	OLFR1002	NM_146573.2	NM_146573.2		258566	121583706	NM_146573.2	Olfr1002	NP_666784.2	ILMN_2593570	006960408	S	817	GTTGTGTCACTATTTTACACTGCTGTAATCCCTATGTTGAACCCATTCAT	2	-	85487610-85487659	2qD	Mus musculus olfactory receptor 1002 (Olfr1002), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR175-2	MOR175-2
Mus musculus	RefSeq	ILMN_220840	ILMN_220840	HMOX1	NM_010442.1	NM_010442.1		15368	6754211	NM_010442.1	Hmox1	NP_034572.1	ILMN_2788073	005050463	S	1151	AGGGAGATACCTGACACAGTTCCCTCACCAAAAGCACATCCAGCCAGTGG	8	+	77619162-77619211	8qC1	Mus musculus heme oxygenase (decycling) 1 (Hmox1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA];  [goid 6788] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: heme + 3 donor-H2 + 3 O2 = biliverdin + Fe2+ + CO + 3 acceptor + 3 H2O [goid 4392] [evidence IEA]	Hsp32; HO1; Hemox; Hmox; HO-1; D8Wsu38e	Hsp32; HO1; Hemox; Hmox; HO-1; D8Wsu38e
Mus musculus	RefSeq	ILMN_192352	ILMN_236727	TMEM158	NM_001002267.2	NM_001002267.2		72309	116805335	NM_001002267.2	Tmem158	NP_001002267.2	ILMN_3160486	005090010	S	764	CTGCAGGGCGAGCCTCGTCACTTCTGCTGCCTGGACTTCAGCCTGGAGGA	9	-	123169094-123169143	9qF4	Mus musculus transmembrane protein 158 (Tmem158), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ris1; 2310037P21Rik	Ris1; 2310037P21Rik
Mus musculus	RefSeq	ILMN_211072	ILMN_211072	MEMO1	NM_133771.1	NM_133771.1		76890	19526993	NM_133771.1	Memo1	NP_598532.1	ILMN_2903379	006130390	S	904	GTGGAAGACATCCCATTGGGGTGTTATTAAATGCTATCACAGAGCTTCAG	17	-	74600647-74600665:74601601-74601631	17qE2	Mus musculus mediator of cell motility 1 (Memo1), mRNA.				0610016J10Rik; D930048L02Rik	0610016J10Rik; D930048L02Rik
Mus musculus	Riken	ILMN_205622	ILMN_205622	D130051B03RIK	ri|D130051B03|PX00184N03|AK051467|4404					AK051467	D130051B03Rik		ILMN_2573984	002060653	S	3647	GGTGGTTGCTTATGTGCGTTTCTGTGCCGGGAAGGGTAGGAGGTATGGCT										
Mus musculus	RefSeq	ILMN_212521	ILMN_212521	DNASE1L2	NM_025718.1	NM_025718.1		66705	13385173	NM_025718.1	Dnase1l2	NP_079994.1	ILMN_3140032	001010168	A	1015	CGCAGGAGCCTGAAGCCCCACTCAGCCTCAGTTCACAACTTTCAGGAGGA	17	-	24169115-24169164	17qA3.3	Mus musculus deoxyribonuclease 1-like 2 (Dnase1l2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]	4733401H14Rik; MGC118464	4733401H14Rik; MGC118464
Mus musculus	RefSeq	ILMN_212521	ILMN_212521	DNASE1L2	NM_025718.1	NM_025718.1		66705	13385173	NM_025718.1	Dnase1l2	NP_079994.1	ILMN_3062427	000940370	I	1417	CCAGGACTACCCACAGGTTGGATGGGGCCTCTGCTTTCTGAGACCTCTGT	17	-	24168327-24168376	17qA3.3	Mus musculus deoxyribonuclease 1-like 2 (Dnase1l2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]	4733401H14Rik; MGC118464	4733401H14Rik; MGC118464
Mus musculus	RefSeq	ILMN_211834	ILMN_211834	MMP10	NM_019471.2	NM_019471.2		17384	118130723	NM_019471.2	Mmp10	NP_062344.1	ILMN_2619952	003890600	S	1390	GAGGATCATCACAGTTCGAGTTTGACCCCAATGCCAGGACGGTGACACAC	9	+	7509909-7509958	9qA1	Mus musculus matrix metallopeptidase 10 (Mmp10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AV377895	AV377895
Mus musculus	MEEBO	ILMN_188581	ILMN_188581	SCL0002978.1_3	scl0002978.1_3	AK038540.1			26332630	AK038540.1	scl0002978.1_3		ILMN_2453904	005670672	S	20	AATTCTGTACCGAGCCGCACCGGGAAAGACGGAGGGCCACAGACGCTATT										
Mus musculus	RefSeq	ILMN_223183	ILMN_223183	LRP10	NM_022993.3	NM_022993.3		65107	58530883	NM_022993.3	Lrp10	NP_075369.2	ILMN_2760430	007610050	S	2904	GTGCCTGGCCCACTTAGAGGACACAAGTGCTTTTGCCCTGTAGCTGCATC	14	+	55089020-55089069	14qC2-qC3	Mus musculus low-density lipoprotein receptor-related protein 10 (Lrp10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IDA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IDA]	Lrp9	Lrp9
Mus musculus	RefSeq	ILMN_216972	ILMN_216972	CRTAP	NM_019922.1	NM_019922.1		56693	9910169	NM_019922.1	Crtap	NP_064306.1	ILMN_2877541	007050056	S	1267	CTGCCTAGTCCACAGGGGCTAAGGAACCTCTCTTCCGAGTTCCTCTTTCT	9	-	114284604-114284646:114284647-114284653	9qF3	Mus musculus cartilage associated protein (Crtap), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]		CASP; 5730529N23Rik	CASP; 5730529N23Rik
Mus musculus	RefSeq	ILMN_216972	ILMN_216972	CRTAP	NM_019922.1	NM_019922.1		56693	9910169	NM_019922.1	Crtap	NP_064306.1	ILMN_1223997	000620593	S	907	CCCTCACCCCAGTCATAGGAGGCTATCCCGTGGAGAAATTTGTGGCGACC	9	-	114290737-114290786	9qF3	Mus musculus cartilage associated protein (Crtap), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence RCA]		CASP; 5730529N23Rik	CASP; 5730529N23Rik
Mus musculus	RefSeq	ILMN_222602	ILMN_222602	BTK	NM_013482.1	NM_013482.1		12229	7709993	NM_013482.1	Btk	NP_038510.1	ILMN_1235934	005050343	S	2266	CTCGTTCCCTGGCATACTGCTCTAAGCAAAGGTCAAGGGATTTCTGTGCC	X	-	131077075-131077124	XqE3	Mus musculus Bruton agammaglobulinemia tyrosine kinase (Btk), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IDA]	AI528679; xid	AI528679; xid
Mus musculus	RefSeq	ILMN_255776	ILMN_255776	SCN4B	NM_001013390.2	NM_001013390.2		399548	61889069	NM_001013390.2	Scn4b	NP_001013408.1	ILMN_2813547	006220543	S	4191	TCCAGGAGGCACCGACCTGCACATGCCCAGCGCTTGCGTCTAAGCACAGA	9	+	44962091-44962140	9qA5.2	Mus musculus sodium channel, type IV, beta (Scn4b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	Gm1471	Gm1471
Mus musculus	RefSeq	ILMN_201205	ILMN_255776	SCN4B	NM_001013390.2	NM_001013390.2		399548	61889069	NM_001013390.2	Scn4b	NP_001013408.1	ILMN_1242172	006510725	S	468	AAAAGTGGACAACACGGTGACTCTCATCATCCTGGCTGTGGTGGGCGGGG	9	+	44957353-44957402	9qA5.2	Mus musculus sodium channel, type IV, beta (Scn4b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	Gm1471	Gm1471
Mus musculus	RefSeq	ILMN_199583	ILMN_199583	LOC383691	XM_357191.1	XM_357191.1			38074684	XM_357191.1	LOC383691		ILMN_1240638	007150286	S	29	CGTTGCTCAACAACCACATCACAGATGAAAGCCTCAGCCATGGCCCTGTG										
Mus musculus	RefSeq	ILMN_216791	ILMN_216791	OLFR1263	NM_146794.1	NM_146794.1		258790	22129264	NM_146794.1	Olfr1263	NP_667005.1	ILMN_1231085	000150551	S	450	CGGAGCAATACAAACTTTATTTATGGCCCAGTTACCCTTCTGTGGTCCCA	2	+	89855538-89855587	2qE1	Mus musculus olfactory receptor 1263 (Olfr1263), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR234-2	MOR234-2
Mus musculus	RefSeq	ILMN_220053	ILMN_254515	OLFR502	NM_146739.1	NM_146739.1		258734	22129362	NM_146739.1	Olfr502	NP_666950.1	ILMN_1236776	001980678	S	572	CTTGTTCTGATGTCAGTGTCCCTGCAGTTGTTCCCTCATTCACAGCTGGC	7	-	115666841-115666890	7qE3	Mus musculus olfactory receptor 502 (Olfr502), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-8	MOR204-8
Mus musculus	RefSeq	ILMN_260705	ILMN_260705	CCDC124	NM_026964.2	NM_026964.2		234388	47087151	NM_026964.2	Ccdc124	NP_081240.1	ILMN_2944226	005690279	S	249	AGACGCAGCGCCTGCTGGAGGAGGAAGACTCACGGCTCAAAGGCGGCAAG	8	-	73798000-73798049	8qB3.3	Mus musculus coiled-coil domain containing 124 (Ccdc124), mRNA.				1810023B24Rik	1810023B24Rik
Mus musculus	RefSeq	ILMN_198850	ILMN_198850	LOC234081	XM_134040.5	XM_134040.5			38089076	XM_134040.5	LOC234081		ILMN_2533143	003390671	S	542	CTCCTAAGTTCTCTGCCTCCTTTGGTGTTCAGCAGCTGCCGCTGGAGGAG										
Mus musculus	RefSeq	ILMN_217458	ILMN_217458	FAM102A	NM_153560.4	NM_153560.4		98952	146149310	NM_153560.4	Fam102a	NP_705788.1	ILMN_1225348	007380241	S	4081	CCAGGTTACCACTGCACCCCATTCCGTGGGCTGTTCATATCTGTCTCAGC				2qB	Mus musculus family with sequence similarity 102, member A (Fam102a), mRNA.				AI426465; MGC38572; Eeig1	AI426465; MGC38572; Eeig1
Mus musculus	RefSeq	ILMN_199459	ILMN_315758	EG432649	NR_003649.1	NR_003649.1		432649	153792178	NR_003649.1	EG432649		ILMN_1238868	003610373	S	472	TTCCGCTGATGGCACTGGCTGGGCTCCCACTCGAACATTAAAGGATGTCG				12qA3	Mus musculus predicted gene, EG432649 (EG432649), non-coding RNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215708	ILMN_215708	4732418C07RIK	NM_172698.2	NM_172698.2		230648	40254241	NM_172698.2	4732418C07Rik	NP_766286.2	ILMN_2668536	003830762	S	4024	GGTCCCTTCTCTCATATTCAAGCCAGAACACATTTGGGTATTCCTGAGAC	4	+	115449656-115449705	4qD1	Mus musculus RIKEN cDNA 4732418C07 gene (4732418C07Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA0494; RP23-146I18.2	KIAA0494; RP23-146I18.2
Mus musculus	RefSeq	ILMN_215708	ILMN_215708	4732418C07RIK	NM_172698.2	NM_172698.2		230648	40254241	NM_172698.2	4732418C07Rik	NP_766286.2	ILMN_2828512	000620730	S	3909	GCTGAAGGTTTTGACTGTGATGGGCTCACACTTATAATGGCCTATTGAGT	4	+	115449541-115449590	4qD1	Mus musculus RIKEN cDNA 4732418C07 gene (4732418C07Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA0494; RP23-146I18.2	KIAA0494; RP23-146I18.2
Mus musculus	RefSeq	ILMN_215708	ILMN_215708	4732418C07RIK	NM_172698.2	NM_172698.2		230648	40254241	NM_172698.2	4732418C07Rik	NP_766286.2	ILMN_2692060	002060482	S	2233	GTGGGCAGGCCAGGACAGGTCTGATAGGAGCAGATCACCATTCGCTGACA	4	+	115447865-115447914	4qD1	Mus musculus RIKEN cDNA 4732418C07 gene (4732418C07Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA0494; RP23-146I18.2	KIAA0494; RP23-146I18.2
Mus musculus	RefSeq	ILMN_215708	ILMN_215708	4732418C07RIK	NM_172698.2	NM_172698.2		230648	40254241	NM_172698.2	4732418C07Rik	NP_766286.2	ILMN_2712675	002680474	S	1196	GTCCACCTTGCTGTAGAGGTGATACAGAAGACTGTGGATGAGCACAGGAC	4	+	115429071-115429120	4qD1	Mus musculus RIKEN cDNA 4732418C07 gene (4732418C07Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA0494; RP23-146I18.2	KIAA0494; RP23-146I18.2
Mus musculus	RefSeq	ILMN_215708	ILMN_215708	4732418C07RIK	NM_172698.2	NM_172698.2		230648	40254241	NM_172698.2	4732418C07Rik	NP_766286.2	ILMN_2662675	000650379	S	1375	GCACAACTCCTTAGAGGAAGTCAACAGTACTGTAGTGGAATACCAGAGAC	4	+	115432489-115432538	4qD1	Mus musculus RIKEN cDNA 4732418C07 gene (4732418C07Rik), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA0494; RP23-146I18.2	KIAA0494; RP23-146I18.2
Mus musculus	RefSeq	ILMN_200161	ILMN_200161	LOC385833	XM_358964.1	XM_358964.1			38080740	XM_358964.1	LOC385833		ILMN_2537794	005260435	S	775	GCCGAAATGCTGGCCAGGGAACCTGCTTTTCTTGCCTCCGTGATTTGGAG										
Mus musculus	RefSeq	ILMN_221893	ILMN_221893	SALL2	NM_015772.2	NM_015772.2		50524	49087133	NM_015772.2	Sall2	NP_056587.2	ILMN_1240935	006420750	S	4819	GCTTCAAGTGGTTTCCCCCCGTCTCTGTCTTGTAGTGAGATGTAGTATTT	14	-	52931038-52931087	14qC2	Mus musculus sal-like 2 (Drosophila) (Sall2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mKIAA0360; AW559097; AI225809; Msal-2; p150(Sal2)	mKIAA0360; AW559097; AI225809; Msal-2; p150(Sal2)
Mus musculus	Riken	ILMN_204442	ILMN_204442	A730075A06RIK	ri|A730075A06|PX00152C15|AK043241|1494					AK043241	A730075A06Rik		ILMN_1239213	004880451	S	1099	GCCAGGGAAGCTGGAGCAAGTGGCCTGCATGTGGATTTCTTAGAGACTTG										
Mus musculus	RefSeq	ILMN_194092	ILMN_234824	IKBKAP	NM_026079.2	NM_026079.2		230233	142368357	NM_026079.2	Ikbkap	NP_080355.1	ILMN_1253294	006960209	S	4642	GTGCATGGTATTCATGTAGGCAGTTAGTGCTGCCAGCTTTTAGTAAGATG	4	-	56763948-56763997	4qB3	Mus musculus inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein (Ikbkap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Elp1; 3110040G09Rik; C78473; 6030413P05	Elp1; 3110040G09Rik; C78473; 6030413P05
Mus musculus	RefSeq	ILMN_210050	ILMN_210050	ST5	NM_029811.2	NM_029811.2		76954	47716509	NM_029811.2	St5	NP_084087.2	ILMN_3154820	002120195	A	2922	GGCCATGATGCGGTACAGGGCATTTCTCCTTCCACCATCCACAGATGTTC	7	-	116674625-116674674	7qE3	Mus musculus suppression of tumorigenicity 5 (St5), transcript variant 2, mRNA.				2010004M01Rik; 2610305K15Rik	2010004M01Rik; 2610305K15Rik
Mus musculus	RefSeq	ILMN_208616	ILMN_318075	2810409K11RIK	XM_001475009.1	XM_001475009.1		76373	149256761	XM_001475009.1	2810409K11Rik	XP_001475059.1	ILMN_2643060	004290372	S	397	GGCGTCTGTACCACCAGGTGATGATGGAGGTCTTTGTTCTCATGTCCTCA				7qA1	PREDICTED: Mus musculus RIKEN cDNA 2810409K11 gene (2810409K11Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208616	ILMN_318075	2810409K11RIK	XM_001475009.1	XM_001475009.1		76373	149256761	XM_001475009.1	2810409K11Rik	XP_001475059.1	ILMN_2672590	006420301	S	459	CCTTCTGGGACTGACATCACTCAGCTGGGGTCTTCAGGAAATCGCTTCAT				7qA1	PREDICTED: Mus musculus RIKEN cDNA 2810409K11 gene (2810409K11Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_205690	ILMN_205690	ILF2	ri|6330441H14|PX00315C09|AK031892|1375					AK031892	Ilf2		ILMN_1230688	004640632	S	1280	AATAGTGACGTACACCTTTAGTCCCAGCACGTGGAAGGCAGAGGCAGCCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]		
Mus musculus	RefSeq	ILMN_258264	ILMN_258264	A4GNT	NM_001077424.1	NM_001077424.1		333424	116734844	NM_001077424.1	A4gnt	NP_001070892.1	ILMN_2845412	006960739	S	480	AGTCAACAGCAGTACAGAGAAACACTGGCTCCACGTCAGCTCCGACGCAG	9	+	99514342-99514342:99520619-99520667	9qE3.3	Mus musculus alpha-1,4-N-acetylglucosaminyltransferase (A4gnt), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence ISO]	alpha4GnT; AV080780; Gm798	alpha4GnT; AV080780; Gm798
Mus musculus	RefSeq	ILMN_198949	ILMN_258264	A4GNT	NM_001077424.1	NM_001077424.1		333424	116734844	NM_001077424.1	A4gnt	NP_001070892.1	ILMN_1219796	003370347	S	879	GCGCTACTACCAAGTGTGGGACAAAGAGCCCAGCTTCAATGAGTCCTACG	9	+	99521017-99521066	9qE3.3	Mus musculus alpha-1,4-N-acetylglucosaminyltransferase (A4gnt), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence ISO]	alpha4GnT; AV080780; Gm798	alpha4GnT; AV080780; Gm798
Mus musculus	RefSeq	ILMN_196728	ILMN_196727	HIST1H2AD	NM_178188.3	NM_178188.3		319165	67972409	NM_178188.3	Hist1h2ad	NP_835495.1	ILMN_1226839	007160253	S	343	GTGCTGCTGCCCAAGAAGACCGAGAGCCACCACAAGGCCAAGGGGAAATA	13	+	23666682-23666731	13qA3.1	Mus musculus histone cluster 1, H2ad (Hist1h2ad), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_196727	ILMN_196727	HIST1H2AD	NM_178188.3	NM_178188.3		319165	67972409	NM_178188.3	Hist1h2ad	NP_835495.1	ILMN_2795040	003520717	S	3	GTCTGGACGCGGCAAACAGGGTGGCAAGGCTCGCGCCAAGGCCAAGACCC	13	+	23666342-23666391	13qA3.1	Mus musculus histone cluster 1, H2ad (Hist1h2ad), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_194355	ILMN_260257	NONO	NM_023144.1	NM_023144.1		53610	12963530	NM_023144.1	Nono	NP_075633.1	ILMN_2626779	007160148	S	2322	ATTGTTCCAGATACCTTCAGTTTGGAAAGTTTTCTGAGAAATGGAGACGT	X	+	98643851-98643900	XqD	Mus musculus non-POU-domain-containing, octamer binding protein (Nono), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AA407051; NRB54; MGC103109; AV149256; nonA; P54NRB	AA407051; NRB54; MGC103109; AV149256; nonA; P54NRB
Mus musculus	MEEBO	ILMN_187875	ILMN_187875	6330509M05RIK	scl7210.1.1_253						6330509M05Rik		ILMN_2447875	001440204	S	3	CTCACCGTTTACTCGCGCCTTCCTAGAGATGTTTAGATTGTAAAGCTAGC										
Mus musculus	MEEBO	ILMN_187724	ILMN_187724	D030029J20RIK	scl4369.1.1_105						D030029J20Rik		ILMN_1257291	006270711	S	1	CTTGGGTCTCTCCATCCAGAGGCAACCATTATTAACATTCTGTTATTCTT										
Mus musculus	RefSeq	ILMN_261272	ILMN_261272	KNCN	NM_001039124.2	NM_001039124.2		654462	142366723	NM_001039124.2	Kncn	NP_001034213.1	ILMN_3161648	001740639	S	766	CGATGTGGAAATGAGCCCTGGGAATGCTGGGCCTACCTTCTCTTCCAGTG	4	+	115560384-115560433	4qD1	Mus musculus kinocilin (Kncn), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; An immotile primary cilium that is found at the apical surface of auditory receptor cells. The kinocilium is surrounded by actin-based stereocilia [goid 60091] [evidence IDA]; A dense network of actin filaments found beneath the apical cell surface of hair cells, and into which stereocilia are inserted [goid 32437] [evidence IDA]			L5; Kino	L5; Kino
Mus musculus	Riken	ILMN_202511	ILMN_202511	1700126L06RIK	ri|1700126L06|ZX00078D17|AK007293|1110					AK007293	1700126L06Rik		ILMN_2550168	001710288	S	935	AGCCATCAGGGGTTAAGGGGACAGGGTTACTTGCTGGAAGACACTCACCC										
Mus musculus	Riken	ILMN_205383	ILMN_205383	D630003H14RIK	ri|D630003H14|PX00196G07|AK052603|3574					AK052603	D630003H14Rik		ILMN_2572143	006420239	S	3379	ACTGGTTCCTTTGCTCTTTGTGTGCAAATAACGTCTTGGTAGCTAGTCCC										
Mus musculus	RefSeq	ILMN_197952	ILMN_248364	LOC433027	XR_004013.1	XR_004013.1		433027	94401328	XR_004013.1	LOC433027		ILMN_1240744	000240333	S	1115	CTATTGCTCCGGAGATCTATGAACATGAAGATGTAAGGAAAGCACTGCTG				16qC1.1	PREDICTED: Mus musculus similar to minichromosome maintenance protein 7 (LOC433027), mRNA.					
Mus musculus	RefSeq	ILMN_217439	ILMN_257858	MYO5C	NM_001081322.1	NM_001081322.1		208943	124486758	NM_001081322.1	Myo5c	NP_001074791.1	ILMN_2683244	006900601	S	6590	GTCCTCTCTGGGGCGACCGGTTGATTGTTCAGTACCACCTACTAAACGTG	9	+	75153115-75153164	9qD	Mus musculus myosin VC (Myo5c), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	9130003O20Rik; BB085560; C330029I24	9130003O20Rik; BB085560; C330029I24
Mus musculus	Riken	ILMN_205055	ILMN_205055	PLXN6-PENDING	ri|C230025J23|PX00173J04|AK048728|2297					AK048728	Plxn6-pending		ILMN_2569645	002260440	S	1221	TGGTCTGGGCCTGTGGCTATGCCTGGCCTCTTGCTCCAGGCACAAGAGCA										
Mus musculus	MEEBO	ILMN_223281	ILMN_223281	D130009I18RIK	scl46002.13.1_69				51768611	XM_488723	D130009I18Rik		ILMN_1213952	001400255	S	2339	GTGCTAATTTACCGGGCCCGTGAAAATGTCTAAAAAACTAAAACAACAAC										
Mus musculus	RefSeq	ILMN_196797	ILMN_196797	LOC230679	XM_143937.1	XM_143937.1			20841839	XM_143937.1	LOC230679		ILMN_1220859	000150079	S	552	CATCATGAAGATTCGCTCAACCCAGAGGAGGACCAAGGACCAAGGTGAAG										
Mus musculus	RefSeq	ILMN_219326	ILMN_219326	OLFR1135	NM_146660.2	NM_146660.2		258654	115529280	NM_146660.2	Olfr1135	NP_666871.2	ILMN_1259000	003850441	S	800	CTCTGGATCAGGACAAAATCACCTCACTTTTTTATACCCTGGTGATCCCC	2	-	87511673-87511722	2qD	Mus musculus olfactory receptor 1135 (Olfr1135), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR177-2	MOR177-2
Mus musculus	RefSeq	ILMN_197206	ILMN_261069	LOC381355	XM_923021.3	XM_923021.3		381355	149249146	XM_923021.3	LOC381355	XP_928114.3	ILMN_1228000	006020360	S	2902	CAGAGCTGCTGGACAGAGGACCAGCCCAAGCTTCAGGATTTGTTGGATAC					PREDICTED: Mus musculus similar to centrosome-associated protein 350 (LOC381355), mRNA.					
Mus musculus	RefSeq	ILMN_202624	ILMN_261069	LOC381355	XM_923021.3	XM_923021.3		381355	149249146	XM_923021.3	LOC381355	XP_928114.3	ILMN_1245296	006770491	S	3537	GGTAGTGTGTGGGAGTCAGTGAGGCCAAGGGGAAAAAGTGGTTTCAGACG					PREDICTED: Mus musculus similar to centrosome-associated protein 350 (LOC381355), mRNA.					
Mus musculus	RefSeq	ILMN_208917	ILMN_208917	CYBASC3	NM_201351.1	NM_201351.1		225912	41235723	NM_201351.1	Cybasc3	NP_958739.1	ILMN_2590779	006370739	S	2421	GACGTTGGGAGGAGGGCTGGCATGGATTTGCTGACTAAATGGAAGCCTGA	19	+	10664161-10664210	19qA	Mus musculus cytochrome b, ascorbate dependent 3 (Cybasc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC065078; MGC86114	BC065078; MGC86114
Mus musculus	Riken	ILMN_205592	ILMN_205592	9430020B03RIK	ri|9430020B03|PX00108C11|AK034651|2716					AK034651	9430020B03Rik		ILMN_1213045	006580215	S	2311	TGTCACAGACACAAGGTTCAATGGCGTCCTGATGTCCCTGTCTCCTACAG										
Mus musculus	Riken	ILMN_205041	ILMN_205041	A630054N20RIK	ri|A630054N20|PX00146P11|AK042056|2610					AK042056	A630054N20Rik		ILMN_1240752	004390242	S	2489	AGCAGCTTACCTGTAATCTCAGGACTTAGGAGGCTGAGGCAGGAGATGTG										
Mus musculus	RefSeq	ILMN_214406	ILMN_214406	LEPREL2	NM_013534.4	NM_013534.4		14789	118129907	NM_013534.4	Leprel2	NP_038562.2	ILMN_1239380	003710315	S	2350	TACACAGACTTAGCCTACAGCACATCAGGCCCGGGAGCCAGGTCTGGCCC	6	-	124800662-124800711	6qF2	Mus musculus leprecan-like 2 (Leprel2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-3-hydroxy-L-proline + succinate + CO2 [goid 19797] [evidence IEA]	BC016431; P3h3; Grcb	BC016431; P3h3; Grcb
Mus musculus	Riken	ILMN_203022	ILMN_203022	6030418C04RIK	ri|6030418C04|PX00056N13|AK031379|2858					AK031379	6030418C04Rik		ILMN_1231844	003870403	S	2575	GATGCAATTCATAGGAGTGGGAGGAGACAGAGGCTTGGCCTTAAACGGAG										
Mus musculus	RefSeq	ILMN_209164	ILMN_231325	DOCK10	XM_891407.3	XM_891407.3		210293	149234138	XM_891407.3	Dock10	XP_896500.3	ILMN_2601627	003440168	S	7132	GATGTTATATTAAAATATTTGTGTATGTGTAAAAACTGTTGATAAATACT	1	-	80497769-80497818	1qC4	PREDICTED: Mus musculus dedicator of cytokinesis 10, transcript variant 2 (Dock10), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IPI]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216816	ILMN_216816	GBP3	NM_018734.3	NM_018734.3		55932	134053870	NM_018734.3	Gbp3	NP_061204.3	ILMN_1244513	001690475	S	2060	CCAGGAGCTGGTAAACTATTTGGTGTGGGGCTGAAATTCCTCGGCTCACT	3	+	142235597-142235646	3qH1	Mus musculus guanylate binding protein 3 (Gbp3), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Gbp4; AW228655	Gbp4; AW228655
Mus musculus	RefSeq	ILMN_216060	ILMN_216060	H6PD	NM_173371.3	NM_173371.3		100198	142382659	NM_173371.3	H6pd	NP_775547.2	ILMN_1244188	006560703	S	4598	CCATCATCCACAGCCAGCAGGGCTTTACCAATCAGTCACATCTGTGTACG	4	-	149353681-149353730	4qE2	Mus musculus hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) (H6pd), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate [goid 17057] [evidence IDA]; Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H [goid 47936] [evidence IEA]	AI785303; Gpd1; G6pd1; Gpd-1	AI785303; Gpd1; G6pd1; Gpd-1
Mus musculus	Riken	ILMN_203395	ILMN_203395	6430524E21RIK	ri|6430524E21|PX00046I05|AK032348|3513					AK032348	6430524E21Rik		ILMN_1252219	001090066	S	1309	CTGTGTCCTCTGTCTGAGCAGGATTTCGGGTGGTGGTTCAATAGCTCTGA										
Mus musculus	RefSeq	ILMN_221324	ILMN_221324	LIMS2	NM_144862.1	NM_144862.1		225341	21450084	NM_144862.1	Lims2	NP_659111.1	ILMN_2942674	002350682	S	1620	GGCACATTGCCCTGGCCATCGAAGACCCACAAGTGGTCACATACTTACAC	18	+	32101561-32101610	18qB1	Mus musculus LIM and senescent cell antigen like domains 2 (Lims2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PINCH2	PINCH2
Mus musculus	MEEBO	ILMN_188673	ILMN_188673	A930026L03RIK	scl28962.1.687_175				31342096	NM_175523	A930026L03Rik		ILMN_2692292	003990634	S	2416	GCGTTTTTATACCACTTTCTGCACACAGTAAGCGAGTTGGGGCCTTTGTT										
Mus musculus	RefSeq	ILMN_199516	ILMN_199516	LOC382651	XM_356611.1	XM_356611.1			38073879	XM_356611.1	LOC382651		ILMN_1222329	006520373	S	222	GAGCAACCTTCTGTCACCAGGAGGGAAAACTGGAAACCTTGCTCACTGCT										
Mus musculus	RefSeq	ILMN_209291	ILMN_209291	NICN1	NM_025449.3	NM_025449.3		66257	133892621	NM_025449.3	Nicn1	NP_079725.1	ILMN_2594394	002350706	S	1508	CCTCCCTTCGGACTATTTGTCATCAGATTCAGCATGAAGTACATCCAACG	9	+	108198232-108198281	9qF2	Mus musculus nicolin 1 (Nicn1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1500032A17Rik	1500032A17Rik
Mus musculus	MEEBO	ILMN_219189	ILMN_219189	2810043G13RIK	scl23691.3_135				51709513	XM_485455	2810043G13Rik		ILMN_2705440	002030048	S	1102	GCGAGGACTGTGGAAACGGGTAAAGTGGCCACGTGGCCTCTCTAGATTCT										
Mus musculus	RefSeq	ILMN_211640	ILMN_211640	SERINC3	NM_012032.2	NM_012032.2		26943	31543852	NM_012032.2	Serinc3	NP_036162.2	ILMN_2787844	001770201	S	3405	CAGCTAGGTAGAGCTGGAGGCTAGGGAAGCTGGGTTTGATGGGTTGTTGG	2	-	163314941-163314990	2qH3	Mus musculus serine incorporator 3 (Serinc3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]		Tde1; AA960047; TMS-1; DIFF33; AIGP1; AA959945	Tde1; AA960047; TMS-1; DIFF33; AIGP1; AA959945
Mus musculus	MEEBO	ILMN_186635	ILMN_186635	SCL000242.1_32	scl000242.1_32	U28789.1			1546778	U28789.1	scl000242.1_32		ILMN_2437207	002320437	S	13	CTAAGGAATTGATGGAATACAAAAAGATTCAAAAGGAGCGTAGGCGCTCA										
Mus musculus	RefSeq	ILMN_211579	ILMN_211579	RAP2C	NM_172413.2	NM_172413.2		72065	65301470	NM_172413.2	Rap2c	NP_766001.1	ILMN_3135473	003460053	A	2748	GGATCACAGGAATCAGGGGAAAGGGATTTGAAAGGTGGTTTCTCCAGCAC	X	-	48357836-48357885	XqA5	Mus musculus RAP2C, member of RAS oncogene family (Rap2c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2010200P20Rik; AL022976; AI194294	2010200P20Rik; AL022976; AI194294
Mus musculus	RefSeq	ILMN_211579	ILMN_211579	RAP2C	NM_172413.2	NM_172413.2		72065	65301470	NM_172413.2	Rap2c	NP_766001.1	ILMN_3058391	001500373	I	2391	CCCTCAAAGCGAGCTCGTGTTCTTACATTTGGGATTTGACGGTGAGAGGC	X	-	48358193-48358242	XqA5	Mus musculus RAP2C, member of RAS oncogene family (Rap2c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2010200P20Rik; AL022976; AI194294	2010200P20Rik; AL022976; AI194294
Mus musculus	RefSeq	ILMN_211579	ILMN_211579	RAP2C	NM_172413.2	NM_172413.2		72065	65301470	NM_172413.2	Rap2c	NP_766001.1	ILMN_1249467	004060180	S	3096	CTTGTCATTTTGTAAGACGACCCTGCAGTCCACCTGTTTGTAACTTTTTT	X	-	48357488-48357537	XqA5	Mus musculus RAP2C, member of RAS oncogene family (Rap2c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2010200P20Rik; AL022976; AI194294	2010200P20Rik; AL022976; AI194294
Mus musculus	RefSeq	ILMN_219376	ILMN_219376	ASCL1	NM_008553.4	NM_008553.4		17172	141802882	NM_008553.4	Ascl1	NP_032579.2	ILMN_2708006	001030008	S	1731	CTCAGTCACCCCCATTCCAGCGATCTATGGACATTTGCCTCCATTGAAGC	10	-	86954264-86954313	10qC1	Mus musculus achaete-scute complex homolog 1 (Drosophila) (Ascl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IGI]; Process by which a cell becomes capable of differentiating autonomously into a neuroblast cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 7400] [evidence IMP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway [goid 45747] [evidence IMP]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IMP]; The process whereby a cell becomes capable of differentiating autonomously into an oligodendrocyte in an environment that is neutral with respect to the developmental pathway [goid 21530] [evidence IMP]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of oligodendrocytes. Oligodendrocytes are non-neuronal cells. The primary function of oligodendrocytes is the myelination of nerve axons in the central nervous system. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21529] [evidence IGI]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into an oligodendrocyte [goid 21779] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21527] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system [goid 48709] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IMP]; The process controlling the timing and/or rate at which a relatively unspecialized cell in the subpallium acquires features of a neuron. The subpallium is the base region of the telencephalon [goid 60165] [evidence IMP]; The process whereby in the subpallium, the developmental fate of a cell becomes restricted such that it will develop into a neuron. The subpallium is the base region of the telencephalon [goid 60163] [evidence IMP]; The biological process whose specific outcome is the progression of the olfactory pit from an initial condition to its mature state. This process begins with the formation of the olfactory pit, which is an indentation of the olfactory placode, and ends when the pits hollows out to form the nasopharynx [goid 60166] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	ASH1; AI225900; Mash1	ASH1; AI225900; Mash1
Mus musculus	RefSeq	ILMN_193699	ILMN_193699	OPALIN	NM_153520.1	NM_153520.1		226115	23943843	NM_153520.1	Opalin	NP_705740.1	ILMN_2824889	003850414	S	782	ATCGAGAGAAGTCTGCCTTTGGGAAACGGCTTGGCTCCCGAGTGTCCTGC	19	-	41137970-41138019	19qC3	Mus musculus oligodendrocytic myelin paranodal and inner loop protein (Opalin), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Tmp10	Tmp10
Mus musculus	RefSeq	ILMN_215535	ILMN_215535	ASB5	NM_029569.3	NM_029569.3		76294	146141088	NM_029569.3	Asb5	NP_083845.1	ILMN_2660728	006180204	S	1258	TGTTTATCAATTTTTACGGTCTTTGGTTTATATTTAAAACATCTATATCA				8qB1.3	Mus musculus ankyrin repeat and SOCs box-containing 5 (Asb5), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		MGC118455; 1110018D09Rik	MGC118455; 1110018D09Rik
Mus musculus	RefSeq	ILMN_245925	ILMN_245925	CYP11B1	NM_001033229.1	NM_001033229.1		110115	84370297	NM_001033229.1	Cyp11b1	NP_001028401.1	ILMN_2993882	005270092	S	2237	CATGTACTACTGGCCAAATCACAGTGTACCATACAGGGAGGGCATGTCCC	15	-	74662234-74662283	15qD3	Mus musculus cytochrome P450, family 11, subfamily b, polypeptide 1 (Cyp11b1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol [goid 6704] [evidence IDA]; The chemical reactions and pathways resulting in the formation of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol [goid 6704] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol [goid 6704] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: corticosterone + reduced adrenal ferredoxin + O2 = 18-hydroxycorticosterone + oxidized adrenal ferredoxin + H2O [goid 47783] [evidence IDA]	CPN1; Cyp11b-1; AA389061; Cyp11b; FHI	CPN1; Cyp11b-1; AA389061; Cyp11b; FHI
Mus musculus	Riken	ILMN_202988	ILMN_202988	6430578G21RIK	ri|6430578G21|PX00047K06|AK032517|2962					AK032517	6430578G21Rik		ILMN_1214199	001440719	S	2725	GGTCTGGTCAGTGAATATGACTTCCAGCATTACCTGGAAGACTGACTCGG										
Mus musculus	RefSeq	ILMN_222243	ILMN_222243	2410012H22RIK	XM_126343.5	XM_126343.5		69747	149261954	XM_126343.5	2410012H22Rik	XP_126343.3	ILMN_2746812	002490768	S	398	GTCAGCTTCTGAGGAACTGCCAGCAGCTCCATGTGTCTGACAAGCAACTG	11	-	62081030-62081079	11qB2	PREDICTED: Mus musculus RIKEN cDNA 2410012H22 gene (2410012H22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_202073	ILMN_312890	LOC100047402	XM_001478079.1	XM_001478079.1		100047402	149271309	XM_001478079.1	LOC100047402	XP_001478129.1	ILMN_1226660	006980278	S	1362	CGCTCTGTTTCCTGCCTGGTCCTTTATTACATGGGCGAACAGCACGGCGT					PREDICTED: Mus musculus hypothetical protein LOC100047402 (LOC100047402), mRNA.					
Mus musculus	RefSeq	ILMN_207106	ILMN_312890	LOC100047402	XM_001478079.1	XM_001478079.1		100047402	149271309	XM_001478079.1	LOC100047402	XP_001478129.1	ILMN_1238074	007380593	S	1015	GGTTAGGATGGCATGAGGGTAAGCCTTACGGAATGAGGGGGAGAAAAAGA					PREDICTED: Mus musculus hypothetical protein LOC100047402 (LOC100047402), mRNA.					
Mus musculus	MEEBO	ILMN_216913	ILMN_216913	PHC1	scl28444.18.1_1	NM_007905.1			6681270	NM_007905.1	Phc1		ILMN_2773464	005670326	S	3161	GAGGCAGAACTCTAAGGATTGGTTGCTGGTGCTACATGGTGACAGCTTTG						A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]		
Mus musculus	RefSeq	ILMN_196638	ILMN_227127	GPRIN2	XM_910756.3	XM_910756.3		432839	149265308	XM_910756.3	Gprin2	XP_915849.3	ILMN_1246116	001980309	S	1242	GCTGTGGCTACCAGCCCATCCCTGGAAGCGCCTGAGACTCTGAACCTATT				14qB	PREDICTED: Mus musculus G protein regulated inducer of neurite outgrowth 2 (Gprin2), mRNA.					
Mus musculus	RefSeq	ILMN_231015	ILMN_231015	EG432637	NM_001004167.1	NM_001004167.1		432637	51921332	NM_001004167.1	EG432637	NP_001004167.1	ILMN_2849567	003840082	S	384	AGTGCCGGGACACCATGTCGGCCATCGAGGAGGATGCGGTGACTTATGAT	12	-	22484800-22484818:22510518-22510548	12qA1.3	Mus musculus predicted gene, EG432637 (EG432637), mRNA.					
Mus musculus	RefSeq	ILMN_221359	ILMN_221359	SHQ1	NM_181590.3	NM_181590.3		72171	141802471	NM_181590.3	Shq1	NP_853621.1	ILMN_2734452	001410014	S	1199	GCTCACTTCTCTGCAAGCCCCACTTTTGGAAGAGGACAGTGCCCTGATCA	6	-	100523468-100523517	6qD3	Mus musculus SHQ1 homolog (S. cerevisiae) (Shq1), mRNA.				2810403P18Rik	2810403P18Rik
Mus musculus	RefSeq	ILMN_184630	ILMN_322437	LOC100046729	XM_001476714.1	XM_001476714.1		100046729	149256813	XM_001476714.1	LOC100046729	XP_001476764.1	ILMN_1216326	005910678	S	849	GGCTATCATTAGAACCTACTTAAACTATCCAGTGATATGGGGAGTAAATA					PREDICTED: Mus musculus similar to vomeronasal receptor V1RG10 (LOC100046729), mRNA.					
Mus musculus	RefSeq	ILMN_225383	ILMN_225383	9230009I02RIK	NM_001033798.1	NM_001033798.1		619293	85702126	NM_001033798.1	9230009I02Rik	NP_001028970.1	ILMN_3160877	007330184	S	850	GAAACAGAGGAGATGGACGAACACATCCAAGAATGGAGTCGAGCAATGGG	11	+	50934958-50935007		Mus musculus RIKEN cDNA 9230009I02 gene (9230009I02Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200360	ILMN_200360	LOC386302	XM_359164.1	XM_359164.1			38081414	XM_359164.1	LOC386302		ILMN_1247963	002450543	S	1828	TGGAGCTCAGAACTGAACAAAGAATTCTCACCTGAGGAATACCGAATGGC										
Mus musculus	Riken	ILMN_203341	ILMN_203341	5033424B07RIK	ri|5033424B07|PX00037D16|AK030336|1382					AK030336	5033424B07Rik		ILMN_1237045	002690685	S	1106	CACCAACCCAGAGGTGGCCCCCACAAAATAGGCTGGACCTTCTTCCATGG										
Mus musculus	RefSeq	ILMN_213976	ILMN_213976	EMP1	NM_010128.4	NM_010128.4		13730	133892886	NM_010128.4	Emp1	NP_034258.1	ILMN_2642913	007160167	S	2331	TGTTCAAGGTAGGTTACTGAACTGCCGGGCTGATGTTAGAGACACTGGCC	6	+	135332801-135332850	6qG1	Mus musculus epithelial membrane protein 1 (Emp1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]		TMP	TMP
Mus musculus	RefSeq	ILMN_255079	ILMN_255079	SLC27A5	NM_009512.1	NM_009512.1		26459	6678010	NM_009512.1	Slc27a5	NP_033538.1	ILMN_2847061	000620594	S	2059	TGCTGACCCCCTCTACATACTGGACAACAAGGCCCAGACCTTCCGGAGTC	7	-	13573874-13573923	7qA1	Mus musculus solute carrier family 27 (fatty acid transporter), member 5 (Slc27a5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reactions: (1) ATP + cholate + CoA = AMP + diphosphate + choloyl-CoA and (2) ATP + (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate + CoA = AMP + diphosphate + (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA [goid 47747] [evidence IEA]	VLCSH2; MGC143799; FATP5; FACVL3; VLCS-H2; Vlacsr	VLCSH2; MGC143799; FATP5; FACVL3; VLCS-H2; Vlacsr
Mus musculus	RefSeq	ILMN_196540	ILMN_196540	4930505D03RIK	XM_137322.8	XM_137322.8		74694	149261089	XM_137322.8	4930505D03Rik	XP_137322.8	ILMN_1244391	004780767	S	2641	CGGCACGCTTCAGAGTTAGCCGATGCCCCTGGAGAAAACCAGACTGCCAT	10	-	120704079-120704128	10qD2	PREDICTED: Mus musculus RIKEN cDNA 4930505D03 gene (4930505D03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196540	ILMN_196540	4930505D03RIK	XM_137322.8	XM_137322.8		74694	149261089	XM_137322.8	4930505D03Rik	XP_137322.8	ILMN_2642080	006220669	S	3483	AAAGCATAGCAAAAATGTCAAGATAGCCTTTCTTTAACTTTCTATTTCTA	10	-	120703237-120703286	10qD2	PREDICTED: Mus musculus RIKEN cDNA 4930505D03 gene (4930505D03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_202327	ILMN_196540	4930505D03RIK	XM_137322.8	XM_137322.8		74694	149261089	XM_137322.8	4930505D03Rik	XP_137322.8	ILMN_1254959	003850114	S	2968	TGAGAGGTTCAGAGCTGAGCACCATCAGCCCCATCCAAACGGGAATTGGA	10	-	120703752-120703801	10qD2	PREDICTED: Mus musculus RIKEN cDNA 4930505D03 gene (4930505D03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218294	ILMN_218294	ADM2	NM_182928.3	NM_182928.3		223780	66793437	NM_182928.3	Adm2	NP_891558.1	ILMN_1241813	004180609	S	400	GGGCCCTTGCTATGGTTCATCTGCCTCAGGGTGGTGGCTCACGACACCCT	15	+	89154516-89154565	15qE3	Mus musculus adrenomedullin 2 (Adm2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Imdn; Am2	Imdn; Am2
Mus musculus	RefSeq	ILMN_220906	ILMN_220906	1810010M01RIK	NM_026918.2	NM_026918.2		69036	118130286	NM_026918.2	1810010M01Rik	NP_081194.1	ILMN_2728429	000620725	S	447	CTGCCATAGATTCTATTAGCCTGCACTGGGATACCTACCCTAGCCACTGC	7	-	134193809-134193858	7qF3	Mus musculus RIKEN cDNA 1810010M01 gene (1810010M01Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	ZG16p; AI593689	ZG16p; AI593689
Mus musculus	RefSeq	ILMN_220680	ILMN_220680	CCNC	NM_016746.1	NM_016746.1		51813	7949015	NM_016746.1	Ccnc	NP_058026.1	ILMN_2936153	000840333	S	3185	ATGTGGCTTGTCTGAATGCAGATATGCTATAAATGTGCAAACATGTTGGG	4	+	21841205-21841254	4qA3	Mus musculus cyclin C (Ccnc), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		CG1C; AU020987; AI451004	CG1C; AU020987; AI451004
Mus musculus	RefSeq	ILMN_188259	ILMN_188259	TOLLIP	NM_023764.2	NM_023764.2		54473	31340585	NM_023764.2	Tollip	NP_076253.1	ILMN_2789208	002810025	S	3436	GTGAGTGATGCCTACCCGATGACAGAAGTGTTGTGCGACTGGGCTCTGCC	7	-	141691194-141691243	7qF5	Mus musculus toll interacting protein (Tollip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	4930403G24Rik; 4931428G15Rik	4930403G24Rik; 4931428G15Rik
Mus musculus	RefSeq	ILMN_242087	ILMN_242087	TIMP1	NM_011593.2	NM_011593.2		21857	113205064	NM_011593.2	Timp1	NP_035723.2	ILMN_3103896	000160332	A	699	TCTGAGGACTACCAGAGCCGTCACTTTGCTTGCCTGCCACGGAATCCAGG	X	+	20451675-20451724	XqA1.3	Mus musculus tissue inhibitor of metalloproteinase 1 (Timp1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IEA]	Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Clgi; MGC7143; TIMP-1; Timp	Clgi; MGC7143; TIMP-1; Timp
Mus musculus	RefSeq	ILMN_201406	ILMN_201406	LOC385111	XM_358060.1	XM_358060.1			38093550	XM_358060.1	LOC385111		ILMN_2542182	003170653	S	322	GAACACCAGCGGAAGCTGGAGAGGCACCGCCAGGAGCAGGAGCTGGAGAA										
Mus musculus	RefSeq	ILMN_186793	ILMN_240899	VRK1	NM_011705.3	NM_011705.3		22367	71067123	NM_011705.3	Vrk1	NP_035835.1	ILMN_2488125	000510673	S	1265	TGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGG	12	+	107309784-107309833	12qF1	Mus musculus vaccinia related kinase 1 (Vrk1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]	51PK	51PK
Mus musculus	Riken	ILMN_202508	ILMN_202508	1700082G03RIK	ri|1700082G03|ZX00076I08|AK006979|1447					AK006979	1700082G03Rik		ILMN_1239174	001820066	S	415	CGGTCTCTTTCGTAGGTGCTCATGATCTGTGGCTCTGTTCTAAACAGCCC										
Mus musculus	RefSeq	ILMN_215770	ILMN_215770	CWC15	NM_023153.3	NM_023153.3		66070	116174750	NM_023153.3	Cwc15	NP_075642.1	ILMN_2663410	002070730	S	834	GAAGTTCATGGAGAAATATATTAAGTAATATAGTTTTATGTGCTTAATTA	9	+	14314746-14314773:14314774-14314795	9qA1	Mus musculus CWC15 homolog (S. cerevisiae) (Cwc15), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2900052N06Rik; Ed1; mED1; c11orf5	2900052N06Rik; Ed1; mED1; c11orf5
Mus musculus	RefSeq	ILMN_214868	ILMN_214868	FCER2A	NM_013517.1	NM_013517.1		14128	7305050	NM_013517.1	Fcer2a	NP_038545.1	ILMN_2652875	004590095	S	1080	TGGGTGTGTGAGCAGCTGGCAACATGTGAGATATCTGCCCCCTTAGCCTC	8	-	3682848-3682897	8qA1.1	Mus musculus Fc receptor, IgE, low affinity II, alpha polypeptide (Fcer2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2925] [evidence IMP]	Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ly-42; Fce2; CD23	Ly-42; Fce2; CD23
Mus musculus	RefSeq	ILMN_214868	ILMN_214868	FCER2A	NM_013517.1	NM_013517.1		14128	7305050	NM_013517.1	Fcer2a	NP_038545.1	ILMN_2975312	002750706	S	1776	GTCCTAAAGCTAGCCCCCAAGGTCTATTCCCTTATTTGGCCACTTCCTCC	8	-	3682152-3682201	8qA1.1	Mus musculus Fc receptor, IgE, low affinity II, alpha polypeptide (Fcer2a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that activates or increases the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2925] [evidence IMP]	Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Ly-42; Fce2; CD23	Ly-42; Fce2; CD23
Mus musculus	RefSeq	ILMN_241246	ILMN_241246	CYPT8	NM_001039941.1	NM_001039941.1		664723	90186255	NM_001039941.1	Cypt8	NP_001035030.1	ILMN_3001415	005810754	S	468	TGAGCCAGAGGAAGTTCCACCATGCCTTGACAGAGACCTGGCTCCGAATG					Mus musculus cysteine-rich perinuclear theca 8 (Cypt8), mRNA.					
Mus musculus	RefSeq	ILMN_222675	ILMN_222675	SHC3	NM_009167.2	NM_009167.2		20418	142384043	NM_009167.2	Shc3	NP_033193.1	ILMN_2753272	005690132	S	1382	CCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCT	13	-	51526518-51526521:51526522-51526567	13qA5	Mus musculus src homology 2 domain-containing transforming protein C3 (Shc3), mRNA.		The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	N-Shc; ShcC; MGC124163; Rai	N-Shc; ShcC; MGC124163; Rai
Mus musculus	RefSeq	ILMN_259785	ILMN_259785	MTNR1B	NM_145712.1	NM_145712.1		244701	25014089	NM_145712.1	Mtnr1b	NP_663758.1	ILMN_2800014	007320100	S	774	GGTTTTTGCCATATGCTGGGCCCCCCTCAACTGTATCGGCCTTGCAGTGG	9	-	15667382-15667431	9qA2	Mus musculus melatonin receptor 1B (Mtnr1b), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with melatonin, N-acetyl-5-methoxytryptamine, to initiate a change in cell activity. Melatonin is a neuroendocrine substance that stimulates the aggregation of melanosomes in melanophores, thus lightening the skin [goid 8502] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC129287; Mel-1B-R; MGC129286; Mel1b	MGC129287; Mel-1B-R; MGC129286; Mel1b
Mus musculus	RefSeq	ILMN_209989	ILMN_209989	RND3	NM_028810.2	NM_028810.2		74194	118130546	NM_028810.2	Rnd3	NP_083086.1	ILMN_1230157	004070400	S	1797	GTGCGCTGTTTAGAAGAGTGTGTGTGGCTTTGTTTTTCTTTTTGCCATCG	2	-	50986939-50986988	2qC1.1	Mus musculus Rho family GTPase 3 (Rnd3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	AI661404; Rhoe; 2610017M01Rik; Arhe	AI661404; Rhoe; 2610017M01Rik; Arhe
Mus musculus	RefSeq	ILMN_224849	ILMN_224849	OLFR518	NM_146306.1	NM_146306.1		258303	22129678	NM_146306.1	Olfr518	NP_666418.1	ILMN_2853579	006040458	S	648	CTACGCCTTCACAGGCACCATTTTGATTGTCATGGTCCCCTTTCTGTTGA	7	-	116024421-116024470	7qE3	Mus musculus olfactory receptor 518 (Olfr518), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR268-5	MOR268-5
Mus musculus	RefSeq	ILMN_216633	ILMN_224849	OLFR518	NM_146306.1	NM_146306.1		258303	22129678	NM_146306.1	Olfr518	NP_666418.1	ILMN_2673414	001770286	S	482	TGAAATTAGTTATATTCTCATGGGTATCTGGGATCATGGTGGCTACTGTG	7	-	116024587-116024636	7qE3	Mus musculus olfactory receptor 518 (Olfr518), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR268-5	MOR268-5
Mus musculus	Riken	ILMN_206236	ILMN_206236	D230014K01RIK	ri|D230014K01|PX00187P11|AK084254|2746					AK084254	D230014K01Rik		ILMN_1254872	005860370	S	146	TGGGCTGAGCTCCAGGTCTGGGCTTGGGGTGGCCATGCTGCCTGTCGTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: endohydrolysis of the N,N'-diacetylchitobiosyl unit in high-mannose glycopeptides and glycoproteins containing the -[Man(GlcNAc)2]Asn-structure. One N-acetyl-D-glucosamine residue remains attached to the protein; the rest of the oligosaccharide is released intact [goid 33925] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197338	ILMN_197338	LOC381400	XM_355358.1	XM_355358.1			38075206	XM_355358.1	LOC381400		ILMN_2527779	005820170	S	2578	CTGGATGATGCCGAGGAACGGGCAGACATGGCAGAGACCCAGGCCAACAA										
Mus musculus	RefSeq	ILMN_200123	ILMN_200123	LOC384227	XM_357504.1	XM_357504.1			38080506	XM_357504.1	LOC384227		ILMN_2537672	005550390	S	855	GGCTATGTCCACACTAGGCAGCGGGACCCTTTCAGCTCCCTCAGAAGCTT										
Mus musculus	MEEBO	ILMN_185764	ILMN_185764	PLOD3	scl0003999.1_7						Plod3		ILMN_2429808	004560632	S	12	ATTAGGCTGGACCTCAGCCTCTTGGTGTCCTGTAGTCCTGAAGTCTGTGG						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2 [goid 8475] [evidence IEA]		
Mus musculus	RefSeq	ILMN_255421	ILMN_255421	5430435G22RIK	NM_145509.1	NM_145509.1		226421	21704001	NM_145509.1	5430435G22Rik	NP_663484.1	ILMN_2882088	002940176	S	2590	CAGTGAGCCCTGCGTCCTTCAGAGATGAACACTGTGCCCCCGTCACACAT				1qE4	Mus musculus RIKEN cDNA 5430435G22 gene (5430435G22Rik), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_258210	ILMN_258210	HIPK4	NM_001033315.1	NM_001033315.1		233020	85701817	NM_001033315.1	Hipk4	NP_001028487.1	ILMN_2794023	002350546	S	2780	GCACATGCCCTGTATCCCACCCTAAATGTTGGAGGTCGTCAGGGTCTGGC	7	+	28316043-28316092	7qA3	Mus musculus homeodomain interacting protein kinase 4 (Hipk4), mRNA. XM_921955	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Gm162	Gm162
Mus musculus	MEEBO	ILMN_209298	ILMN_209298	TAF3	scl19686.9_81	XM_129997.5			38074434	XM_129997.5	Taf3		ILMN_2594443	002810736	S	4498	GGTTCTCGGCCTTGATGTTAAATTGCAGAAAAGTGGGAATGGAGTCAACC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence TAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence TAS]		
Mus musculus	Riken	ILMN_201662	ILMN_201662	WIZ	ri|1500011G01|R000020I20|AK005208|1479					AK005208	Wiz		ILMN_1238008	000060471	S	1429	AGAGCACATGCTGAGCATAAGCAAGACCCACAGTTCGTGCCCAGACTCAC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212942	ILMN_254938	MUC16	XM_911929.3	XM_911929.3		73732	149259833	XM_911929.3	Muc16	XP_917022.3	ILMN_2631869	007210079	S	25710	AGTTCAACGTCATCGTCTAGCTTATTATTTGTCTCACCTGGACCTGAGGA	9	-	18299972-18300021	9qA2	PREDICTED: Mus musculus mucin 16 (Muc16), mRNA.					
Mus musculus	RefSeq	ILMN_209415	ILMN_313647	4930403J07RIK	XM_001481313.1	XM_001481313.1		75773	149259292	XM_001481313.1	4930403J07Rik	XP_001481363.1	ILMN_1217544	006580368	S	1565	GACCAGCAGGGCCTGGGGGCCTGGCCCTCAAAGCCATTGGTGGGTAAATT				8qE1	PREDICTED: Mus musculus RIKEN cDNA 4930403J07 gene (4930403J07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_201469	ILMN_201469	LOC385228	XM_358130.1	XM_358130.1			38094035	XM_358130.1	LOC385228		ILMN_2542407	002490246	S	181	CGTGACAACACAGTGGAGCACAGTGACACCACAGTGAACATTGTGTCACA										
Mus musculus	Riken	ILMN_206507	ILMN_206507	CASP9	ri|D630041E16|PX00198C07|AK085561|1802					AK085561	Casp9		ILMN_1255180	005080133	S	1728	CTAGTGCCCATCTCCCTCTGGGGAATATCAGTTGGCGTCATTAGGACAGC						That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]		
Mus musculus	RefSeq	ILMN_185549	ILMN_251222	D430039N05RIK	XM_001000978.1	XM_001000978.1		241520	94368407	XM_001000978.1	D430039N05Rik	XP_001000978.1	ILMN_2427964	000630239	S	5687	ATAATAAAATTAATCTAAATGTATGCTTGTAGTGTTTAATTTCAAATAAA				2qD	PREDICTED: Mus musculus RIKEN cDNA D430039N05 gene (D430039N05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_221090	ILMN_221090	OLFR165	NM_146466.1	NM_146466.1		258458	33238891	NM_146466.1	Olfr165	NP_666677.1	ILMN_2796834	002230736	S	423	CTGTAGTCTAATGGCTGCCTTCTCTTGGATTCTTGGCTCCCTTGATGGTA	16	-	19407638-19407687	16qA3	Mus musculus olfactory receptor 165 (Olfr165), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR279-1	MOR279-1
Mus musculus	Riken	ILMN_205971	ILMN_205971	D130064L03RIK	ri|D130064L03|PX00185B19|AK083932|2551					AK083932	D130064L03Rik		ILMN_1252887	004480349	S	2491	GACTAAGCCTGGCAAAACTGTGATGGGGGTGTCTACAGCCCCACCAATAA										
Mus musculus	RefSeq	ILMN_187883	ILMN_255971	1700016J18RIK	XM_994504.1	XM_994504.1		75561	94388053	XM_994504.1	1700016J18Rik	XP_999598.1	ILMN_1225662	002710010	S	371	CAGAGAGTGCTATCCCTGTGTGTGAATAGCTGAATCGTGGGCCGTAGCAA	10	+	41738542-41738570:41738571-41738591	10qB2	PREDICTED: Mus musculus RIKEN cDNA 1700016J18 gene (1700016J18Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219068	ILMN_219068	EEF1E1	NM_025380.2	NM_025380.2		66143	93102406	NM_025380.2	Eef1e1	NP_079656.1	ILMN_2703844	003990376	S	466	GCTGGTTTTGTCACATTCAACATTACCCAGACATCAGGCAACATCTGTCC	13	-	38738083-38738132	13qA3.3	Mus musculus eukaryotic translation elongation factor 1 epsilon 1 (Eef1e1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A multienzyme complex found in all multicellular eukaryotes composed of eight proteins with aminoacyl-tRNA synthetase activities (abbreviated as: ArgRS, AspRS, GluProRS, GlnRS, IleRS, LeuRS, LysRS, MetRS where RS is the enzyme, preceded by the amino acid it uses as a substrate) as well as three non-synthetase proteins (p43, p38, and p18) with diverse functions. Several of these subunits are known dimers, so the total polypeptide count in the multisynthetase complex is at least fifteen. All of the enzymes in this assembly catalyze the same reaction, the covalent attachment of an amino acid to either the 2'- or 3'-hydroxyl of the 3'-terminal adenosine of tRNA, but using different substrates [goid 17101] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that activates, maintains or increases the rate of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 43517] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1110003A02Rik	1110003A02Rik
Mus musculus	RefSeq	ILMN_209916	ILMN_209916	OLFR414	NM_146761.1	NM_146761.1		258756	22129328	NM_146761.1	Olfr414	NP_666972.1	ILMN_2600407	001170136	S	582	GGCCGAGTTAGTAGACTTCCTGCTGGCGCTGGTCATGATTCTGTTGCCTC	1	+	176361142-176361191	1qH3	Mus musculus olfactory receptor 414 (Olfr414), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC123768; MOR103-10; MGC123767	MGC123768; MOR103-10; MGC123767
Mus musculus	MEEBO	ILMN_190477	ILMN_190477	9630013D21RIK	scl23993.3_453				31342546	NM_176994	9630013D21Rik		ILMN_2705297	001070681	S	1851	AACCTCCAGAATGACAATGATATTAAATCAGCTAACAGAAATGTCACCTC										
Mus musculus	MEEBO	ILMN_190477	ILMN_190477	9630013D21RIK	scl23993.3_453				31342546	NM_176994	9630013D21Rik		ILMN_2470508	007570687	S	13	CTGTAGCTGAAAACTAAGTGAGACACAAGTAAGTGCCTGGTGATGTGTAC										
Mus musculus	RefSeq	ILMN_218028	ILMN_218028	SERPINI1	NM_009250.1	NM_009250.1		20713	6678090	NM_009250.1	Serpini1	NP_033276.1	ILMN_3161679	002350333	S	2425	GCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGTGCAGGGAGGA	3	+	75445777-75445826	3qE3	Mus musculus serine (or cysteine) peptidase inhibitor, clade I, member 1 (Serpini1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	AI837402; Ns; Spi17; PI12	AI837402; Ns; Spi17; PI12
Mus musculus	RefSeq	ILMN_211658	ILMN_211658	SLC17A7	NM_182993.1	NM_182993.1		72961	33859826	NM_182993.1	Slc17a7	NP_892038.1	ILMN_2618244	004220220	S	2429	TTCTCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCATTTGTT	7	+	52431216-52431265	7qB4	Mus musculus solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 (Slc17a7), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; A synapse in which an action potential in the presynaptic cell increases the probability of an action potential occurring in the postsynaptic cell [goid 60076] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISO]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of binding or confining a neurotransmitter such that it is separated from other components of a biological system [goid 42137] [evidence IMP]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + inorganic phosphate(out) = Na+(in) + inorganic phosphate(in) [goid 15319] [evidence ISO]	AI851913; Vglut1; 2900052E22Rik	AI851913; Vglut1; 2900052E22Rik
Mus musculus	RefSeq	ILMN_209281	ILMN_209281	PARP11	NM_181402.3	NM_181402.3		101187	118130650	NM_181402.3	Parp11	NP_852067.1	ILMN_2594311	005390390	S	3386	CATGTATAGAAGAACATCACTCCCTCTGCTCATCCCACGGAGTGGGAGGG	6	+	127443919-127443968	6qF3	Mus musculus poly (ADP-ribose) polymerase family, member 11 (Parp11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]	AI851877; 5330431N24Rik; HIN1L	AI851877; 5330431N24Rik; HIN1L
Mus musculus	RefSeq	ILMN_209281	ILMN_209281	PARP11	NM_181402.3	NM_181402.3		101187	118130650	NM_181402.3	Parp11	NP_852067.1	ILMN_1221241	002970039	S	372	TCAGTTAGCAGTGAAGATATCGAAAAAAGCTTCAAAACAAACCCTTGTGG	6	+	127421587-127421636	6qF3	Mus musculus poly (ADP-ribose) polymerase family, member 11 (Parp11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]	AI851877; 5330431N24Rik; HIN1L	AI851877; 5330431N24Rik; HIN1L
Mus musculus	RefSeq	ILMN_192812	ILMN_329133	LOC100048439	XM_001479980.1	XM_001479980.1		100048439	149249567	XM_001479980.1	LOC100048439	XP_001480030.1	ILMN_2491552	006860474	S	7013	CGGGTTTTCCAGGTGACTATTTTGGTGAGTGTCAAAATAAGAATTTATGG					PREDICTED: Mus musculus similar to homeodomain interacting protein kinase 3 (LOC100048439), mRNA.					
Mus musculus	RefSeq	ILMN_209119	ILMN_209119	ADD2	NM_013458.2	NM_013458.2		11519	31560503	NM_013458.2	Add2	NP_038486.2	ILMN_2819992	001230253	S	2959	TGGATGGAAGAACTCTAAGAGCCAACAGATAGAGGGCAAACTAAGTCGCC	6	+	86085029-86085078	6qD1	Mus musculus adducin 2 (beta) (Add2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2900072M03Rik	2900072M03Rik
Mus musculus	RefSeq	ILMN_197349	ILMN_226572	2310033K02RIK	NM_001080708.2	NM_001080708.2		69553	148540127	NM_001080708.2	2310033K02Rik	NP_001074177.1	ILMN_2527817	006040661	S	2636	ACTACACTAATGCCTTAAATGACAGTGACGCCAAGGTCCAGCAGGCGGCG				2qH3	Mus musculus RIKEN cDNA 2310033K02 gene (2310033K02Rik), mRNA.					
Mus musculus	Riken	ILMN_205075	ILMN_205075	D430023G06RIK	ri|D430023G06|PX00193D24|AK052440|3037					AK052440	D430023G06Rik		ILMN_2569798	000940079	S	2676	GGGCTGCGCCCACTGAAGTTAAAATCCGAGTCCTGAACAGCACAGCCATC										
Mus musculus	RefSeq	ILMN_216242	ILMN_216242	GYLTL1B	NM_172670.1	NM_172670.1		228366	27369973	NM_172670.1	Gyltl1b	NP_766258.1	ILMN_1235131	005900274	S	2226	CACACTGGGATCCAGCCCTCCTTTGCCTCAGCTGGTTTGGGGCTAGTCTA	2	-	92205243-92205292	2qE1	Mus musculus glycosyltransferase-like 1B (Gyltl1b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Large2; AI891893; Largel; mKIAA4105; KIAA4105; 5730485C17Rik	Large2; AI891893; Largel; mKIAA4105; KIAA4105; 5730485C17Rik
Mus musculus	RefSeq	ILMN_216242	ILMN_216242	GYLTL1B	NM_172670.1	NM_172670.1		228366	27369973	NM_172670.1	Gyltl1b	NP_766258.1	ILMN_2988849	005860689	S	2091	CCTAGCTATGGCTTACACATTCCCTGTAGAGGCTGACCAGGGTGTCCACC	2	-	92205378-92205427	2qE1	Mus musculus glycosyltransferase-like 1B (Gyltl1b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Large2; AI891893; Largel; mKIAA4105; KIAA4105; 5730485C17Rik	Large2; AI891893; Largel; mKIAA4105; KIAA4105; 5730485C17Rik
Mus musculus	RefSeq	ILMN_216242	ILMN_216242	GYLTL1B	NM_172670.1	NM_172670.1		228366	27369973	NM_172670.1	Gyltl1b	NP_766258.1	ILMN_2668902	003460286	S	607	AACCAGAGCGACTGGTACCTGGGCAACCTCTGGAAGAACCATAGGCCCTG	2	-	92209453-92209502	2qE1	Mus musculus glycosyltransferase-like 1B (Gyltl1b), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	Large2; AI891893; Largel; mKIAA4105; KIAA4105; 5730485C17Rik	Large2; AI891893; Largel; mKIAA4105; KIAA4105; 5730485C17Rik
Mus musculus	Riken	ILMN_204871	ILMN_204871	UXT	ri|A230020H02|PX00126B14|AK038495|1523					AK038495	Uxt		ILMN_1231691	006620612	S	1271	GGGTACAGGGAAGTGGTAAGAACATTTGCTTAGCATGTGTGAAGCCCTAG						A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISS]; A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species [goid 930] [evidence ISS]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51297] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence ISS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with the microtubule constituent protein beta-tubulin [goid 48487] [evidence ISS]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215950	ILMN_242357	MYEOV2	XM_888711.3	XM_888711.3		66915	149234223	XM_888711.3	Myeov2	XP_893804.1	ILMN_1249277	002900681	S	259	CTCTCGGGACACGACCAGCTGATTGTAGACACCGTGTTGATATCACTAGA	1	-	94533847-94533896	1qD	PREDICTED: Mus musculus myeloma overexpressed 2 (Myeov2), mRNA.					
Mus musculus	MEEBO	ILMN_188970	ILMN_188970	FZD5	scl17861.1_332				47059487	NM_022721	Fzd5		ILMN_2457239	004290349	S	12	CCTCAGGCAGGCTGCTAAATATTTTGCCTCGTTTAATGCTTGGAATAATC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_188970	ILMN_188970	FZD5	scl17861.1_332				47059487	NM_022721	Fzd5		ILMN_1223759	001690398	S	1483	ACTGGGTGCTCATGCTCAATACTTCATGTTCCTGGTGGTGGGCATCACTC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200338	ILMN_200338	LOC386263	XM_359146.1	XM_359146.1			38081348	XM_359146.1	LOC386263		ILMN_2538408	007330484	S	267	GGACGAAATTCAAGACAGTCTATCAGGAGCAAACAGGAAACATGGTGCAC										
Mus musculus	RefSeq	ILMN_198263	ILMN_198263	LOC381133	XM_355050.1	XM_355050.1			38083441	XM_355050.1	LOC381133		ILMN_1247321	001010154	S	3135	CCAAGCTGGACAGACACACATGGCCCCTTCCTCTCTGGTACTTTGCCTGC										
Mus musculus	Riken	ILMN_207210	ILMN_207210	5230400G24RIK	ri|C530040J01|PX00669B14|AK083056|1966					AK083056	5230400G24Rik		ILMN_1233002	001450181	S	1791	GTTGATGGCTGAGTCTGGATGTAGGTAATGGAAAAGGCTGTGTGAGTTCC										
Mus musculus	RefSeq	ILMN_223365	ILMN_223365	LGSN	NM_008133.3	NM_008133.3		14661	118130959	NM_008133.3	Lgsn	NP_032159.1	ILMN_3149251	001470554	A	1045	GGCGATAAGACATTTGTTGTTCAGGGATTTGGTAATGTGGGCCTGCACTC	14	+	35147454-35147477:35148488-35148513	14qB	Mus musculus lengsin, lens protein with glutamine synthetase domain (Lgsn), mRNA.		The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6542] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine [goid 4356] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Gdh-X; Glud; AI118167; Gludl	Gdh-X; Glud; AI118167; Gludl
Mus musculus	RefSeq	ILMN_223365	ILMN_223365	LGSN	NM_008133.3	NM_008133.3		14661	118130959	NM_008133.3	Lgsn	NP_032159.1	ILMN_3070576	004560538	I	302	ACTACAGCGAAGCGGCCGCCGACCGCGAAGACGACCCCAACTTCTTCAAG	14	+	35124238-35124287	14qB	Mus musculus lengsin, lens protein with glutamine synthetase domain (Lgsn), mRNA.		The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6542] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine [goid 4356] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Gdh-X; Glud; AI118167; Gludl	Gdh-X; Glud; AI118167; Gludl
Mus musculus	RefSeq	ILMN_248024	ILMN_248024	GM1964	NM_001033488.1	NM_001033488.1		432628	85702024	NM_001033488.1	Gm1964	NP_001028660.1	ILMN_3161168	002850373	S	2479	GTACCGGTGCTGGTTACCAAACCCAGGCCCTCTGCAAGAGCAGCAAATGC	12	-	4869585-4869634	12qA1.1	Mus musculus gene model 1964, (NCBI) (Gm1964), mRNA. XM_902261 XM_902263 XM_905976 XM_919594 XM_919603 XM_919612 XM_919619 XM_919624 XM_919636 XM_919641	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	RefSeq	ILMN_220263	ILMN_324509	2310015D24RIK	XM_001474641.1	XM_001474641.1		70100	149267743	XM_001474641.1	2310015D24Rik	XP_001474691.1	ILMN_2719897	004920041	S	1267	ACTGAGAAGTATCTGGGGAGAAGTGGTCATTAATGCAGGCCTGTGTCCCA					PREDICTED: Mus musculus RIKEN cDNA 2310015D24 gene (2310015D24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212301	ILMN_212301	NDUFS4	NM_010887.1	NM_010887.1		17993	6754813	NM_010887.1	Ndufs4	NP_035017.1	ILMN_2900025	006840670	S	209	CCAGAAAGGTCAGAATCTTTGTTCCTGCTCGCAATAACATGCAGTCTGGA	13	-	115107143-115107192	13qD2.2	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 4 (Ndufs4), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IDA]	6720411N02Rik; C1-18k	6720411N02Rik; C1-18k
Mus musculus	RefSeq	ILMN_212301	ILMN_212301	NDUFS4	NM_010887.1	NM_010887.1		17993	6754813	NM_010887.1	Ndufs4	NP_035017.1	ILMN_2663694	004490154	S	557	GTCAGCTGTGCACTATTTATAGTCCATGGATAATGCACCTCTTAATCTCC	13	-	115078879-115078928	13qD2.2	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 4 (Ndufs4), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IDA]	6720411N02Rik; C1-18k	6720411N02Rik; C1-18k
Mus musculus	RefSeq	ILMN_212301	ILMN_212301	NDUFS4	NM_010887.1	NM_010887.1		17993	6754813	NM_010887.1	Ndufs4	NP_035017.1	ILMN_1234521	006040017	S	93	GAGCACATCCACTTGGAAGCTGGCAGACAACCAGACTCGGGACACACAGC	13	-	115141677-115141726	13qD2.2	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 4 (Ndufs4), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IDA]	6720411N02Rik; C1-18k	6720411N02Rik; C1-18k
Mus musculus	RefSeq	ILMN_212301	ILMN_212301	NDUFS4	NM_010887.1	NM_010887.1		17993	6754813	NM_010887.1	Ndufs4	NP_035017.1	ILMN_2640944	001300544	S	441	GGTTCCGAAACCCAAGTCCAAGTCTTATGGTGCAAACTTTTCTTGGAACA	13	-	115078995-115079044	13qD2.2	Mus musculus NADH dehydrogenase (ubiquinone) Fe-S protein 4 (Ndufs4), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IDA]	6720411N02Rik; C1-18k	6720411N02Rik; C1-18k
Mus musculus	MEEBO	ILMN_220471	ILMN_220471	MOSPD2	scl53605.17.1_53	XM_136156.3			38086966	XM_136156.3	Mospd2		ILMN_1257944	006350524	S	1938	GTCCTAACAGTGTCCCTTTAATGTTTCATAAGGAAATCATGTTGATACAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197380	ILMN_256277	BC052688	XM_888474.2	XM_888474.2		432812	94395164	XM_888474.2	BC052688	XP_893567.1	ILMN_1224278	005220221	S	1367	GTAGGGCAGTCTATGACTCTGATGGCCTTGGTACGATCTTTAGCCAGTCC	13	+	61888387-61888436	13qB3	PREDICTED: Mus musculus cDNA sequence BC052688, transcript variant 1 (BC052688), mRNA.					
Mus musculus	RefSeq	ILMN_197379	ILMN_256277	BC052688	XM_888474.2	XM_888474.2		432812	94395164	XM_888474.2	BC052688	XP_893567.1	ILMN_1257414	004060630	S	219	GGAGACCTACAGGAACCTCAACGCTATAGGATTTAATTGGGACGAGAAAC	13	+	61882061-61882089:61882283-61882303	13qB3	PREDICTED: Mus musculus cDNA sequence BC052688, transcript variant 1 (BC052688), mRNA.					
Mus musculus	RefSeq	ILMN_223492	ILMN_223492	PLS3	NM_145629.1	NM_145629.1		102866	21704119	NM_145629.1	Pls3	NP_663604.1	ILMN_2764781	002450131	S	3045	GGTCTCAGAAATGGGAAAGTATGTATGTCGGACTTGATGTACTCTTGCTC	X	-	73031113-73031162	XqA7.3	Mus musculus plastin 3 (T-isoform) (Pls3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	T-fimbrin; AL024105; AI115446	T-fimbrin; AL024105; AI115446
Mus musculus	Riken	ILMN_204352	ILMN_204352	CASP12	ri|B430309C06|PX00072C03|AK046681|1308					AK046681	Casp12		ILMN_1228200	006200390	S	696	CCTTACAGCTCAGGTAATGTCCCCAGAGATTGGGGCAACCTTCTTTGTCC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; The process of apoptosis in cells infected with a virus [goid 6926] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217723	ILMN_217723	DNALC4	NM_017470.1	NM_017470.1		54152	8567345	NM_017470.1	Dnalc4	NP_059498.1	ILMN_2686798	002570121	S	1381	CATATTTTACACAGCGGTCTTATTTATATAAACGTCTTGGTTTTTACAAT	15	-	79591892-79591941	15qE1	Mus musculus dynein, axonemal, light chain 4 (Dnalc4), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	Dnal4; D15Ertd424e	Dnal4; D15Ertd424e
Mus musculus	RefSeq	ILMN_222811	ILMN_222811	BC024997	NM_146004.1	NM_146004.1		215723	22122466	NM_146004.1	BC024997	NP_666116.1	ILMN_1247389	005960008	S	1977	GAAGAAGCCATGTCTATGCCAAAGGCACAGCAGGATCTGCTCGCTGCATG	11	+	68371664-68371713	11qB3	Mus musculus cDNA sequence BC024997 (BC024997), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC32231	MGC32231
Mus musculus	RefSeq	ILMN_186256	ILMN_186256	WASF1	NM_031877.2	NM_031877.2		83767	31982605	NM_031877.2	Wasf1	NP_114083.1	ILMN_1253093	001410279	S	2357	GCAGAACCCCTTCCCACTTATATATTGTGTGGTACAGTTTTGCTTGCCTA	10	+	40658221-40658270	10qB1	Mus musculus WASP family 1 (Wasf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	WAVE-1; WAVE; AI838537; Scar; AI195380	WAVE-1; WAVE; AI838537; Scar; AI195380
Mus musculus	RefSeq	ILMN_201314	ILMN_201314	LOC382419	XM_356496.1	XM_356496.1			38090760	XM_356496.1	LOC382419		ILMN_1213515	000270020	S	418	CTTCGGTTCCTGAGCTGGGACAGGAGTGCACAGTTTGGAGGGTTGTTGTG										
Mus musculus	Riken	ILMN_203350	ILMN_203350	ZFPM2	ri|B330005D23|PX00070M11|AK046521|3007					AK046521	Zfpm2		ILMN_1255116	002850170	S	2848	CCACCTTCTGTGGTAAGCCTTTGCAGACCGTGCATTTGTGTGTATATAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence ISO]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209227	ILMN_209227	IL2RB	NM_008368.3	NM_008368.3		16185	14195581	NM_008368.3	Il2rb	NP_032394.1	ILMN_1246541	007100338	S	2370	TTTATGTGTTCTTGGGCGATGCTGGTCTATGTAAGGGGTGGGGGCGCGGG	15	-	78311211-78311260	15qE1	Mus musculus interleukin 2 receptor, beta chain (Il2rb), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with interleukin-2 [goid 19976] [evidence IPI]; Combining with interleukin-2 to initiate a change in cell activity [goid 4911] [evidence ISO]	IL15Rbeta; Il-2Rbeta; MGC118674; Il-2/15Rbeta; IL-15Rbeta; CD122; p70	IL15Rbeta; Il-2Rbeta; MGC118674; Il-2/15Rbeta; IL-15Rbeta; CD122; p70
Mus musculus	RefSeq	ILMN_199376	ILMN_199376	KNG2	NM_201375.1	NM_201375.1		385643	41235783	NM_201375.1	Kng2	NP_958763.1	ILMN_3126522	000020113	A	759	TGTGGCACTTCCCAATGGTGATGGTGGTGAGTGTAGAGGTAATGCTTTCC	16	-	23000657-23000688:23004005-23004022	16qB1	Mus musculus kininogen 2 (Kng2), mRNA.				MGC123404; MGC117836	MGC123404; MGC117836
Mus musculus	RefSeq	ILMN_199376	ILMN_199376	KNG2	NM_201375.1	NM_201375.1		385643	41235783	NM_201375.1	Kng2	NP_958763.1	ILMN_3050275	006270373	I	1760	CTCCCCGAGCCCAGCCAACTGTTACCTCTTCTGGCTTTCAGGACTCAGAT	16	-	22987819-22987868	16qB1	Mus musculus kininogen 2 (Kng2), mRNA.				MGC123404; MGC117836	MGC123404; MGC117836
Mus musculus	RefSeq	ILMN_212530	ILMN_212530	C330005M16RIK	NM_175319.2	NM_175319.2		101744	31341593	NM_175319.2	C330005M16Rik	NP_780528.1	ILMN_2938973	007400678	S	1579	CTGGGTGGTTAGACCTTTGCTTGGCCGGATGATGTACCACTAAGACCGGG	7	-	28316691-28316699:28316700-28316740	7qA3	Mus musculus RIKEN cDNA C330005M16 gene (C330005M16Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	AU017076	AU017076
Mus musculus	RefSeq	ILMN_218088	ILMN_218088	NDUFA5	NM_026614.2	NM_026614.2		68202	141802530	NM_026614.2	Ndufa5	NP_080890.1	ILMN_2691460	006560152	S	227	CAAAGACTCTTGATATTCTGAAGCACTTTCCTAAACATGCAGCCTATAGA	6	-	24472706-24472755	6qA3.1	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 (Ndufa5), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	2900002J19Rik	2900002J19Rik
Mus musculus	RefSeq	ILMN_218088	ILMN_218088	NDUFA5	NM_026614.2	NM_026614.2		68202	141802530	NM_026614.2	Ndufa5	NP_080890.1	ILMN_1216007	003850307	S	172	CTGGTGGGGTTGGCGGTGTGCGACACTCCACACGAGAGGCTCACAATATT	6	-	24472761-24472775:24477273-24477307	6qA3.1	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 (Ndufa5), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	2900002J19Rik	2900002J19Rik
Mus musculus	MEEBO	ILMN_189639	ILMN_189639	C130026L21RIK	scl27418.7.1_15				31342792	NM_177875	C130026L21Rik		ILMN_2716371	000160037	S	2111	GCTATGCAGCTCAAGGTCTTGCTTCCTTGGTGTTGGGGGACGGATCCCAC										
Mus musculus	MEEBO	ILMN_189639	ILMN_189639	C130026L21RIK	scl27418.7.1_15				31342792	NM_177875	C130026L21Rik		ILMN_1251307	004210722	S	2109	CAGCTATGCAGCTCAAGGTCTTGCTTCCTTGGTGTTGGGGGACGGATCCC										
Mus musculus	RefSeq	ILMN_192219	ILMN_233979	ERCC6	XM_899129.2	XM_899129.2		319955	94396893	XM_899129.2	Ercc6	XP_904222.1	ILMN_1239263	006250670	S	2812	GCACATAGCAAAACCAGGTCCCAACTGAAGTGGCATGGTTGGGTGGTCTG	14	+	31371572-31371621	14qB	PREDICTED: Mus musculus excision repair cross-complementing rodent repair deficiency, complementation group 6, transcript variant 2 (Ercc6), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [evidence IMP]; The repair of UV-induced T-T, C-T and C-C dimers [goid 6290] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IMP]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IMP]; The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity in response to phosphorylation by a member of the JUN kinase kinase kinase (JNKKK) family, or another upstream kinase. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress [goid 7256] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	Riken	ILMN_206956	ILMN_206956	E030034H13RIK	ri|E030034H13|PX00206B06|AK087209|1167					AK087209	E030034H13Rik		ILMN_1231361	001030301	S	851	GACTGCAGCACATCCAAGGGCATCCACGCCGCTGAACCCGGATGAGTAAT										
Mus musculus	RefSeq	ILMN_200284	ILMN_200284	LOC386134	XM_359085.1	XM_359085.1			38081216	XM_359085.1	LOC386134		ILMN_1260084	005420280	S	3	GGCCACAAGGGTTGGGCAGTTGGAGAAAGACGCAACAAACCAGAATCTTC										
Mus musculus	RefSeq	ILMN_219530	ILMN_219530	OLFM3	NM_153458.2	NM_153458.2		229759	133892898	NM_153458.2	Olfm3	NP_703188.1	ILMN_2710095	000010519	S	56	GGTCTCCGCAGTGAGTGAAGTGGCTACATAAAACAGAGTAAAGAGAGGCA	3	+	114607336-114607385	3qF3	Mus musculus olfactomedin 3 (Olfm3), transcript variant A, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B230206G02Rik	B230206G02Rik
Mus musculus	RefSeq	ILMN_211911	ILMN_219530	OLFM3	NM_153458.2	NM_153458.2		229759	133892898	NM_153458.2	Olfm3	NP_703188.1	ILMN_2733897	001850020	S	3523	GTTTCATTGCCCTATCTATTTATAGTGTATGTGCTGCTAGAGAAGCTAAG	3	+	114827801-114827850	3qF3	Mus musculus olfactomedin 3 (Olfm3), transcript variant A, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	B230206G02Rik	B230206G02Rik
Mus musculus	RefSeq	ILMN_199578	ILMN_256105	GFOD1	NM_001033399.3	NM_001033399.3		328232	146198868	NM_001033399.3	Gfod1	NP_001028571.1	ILMN_1244427	001770681	S	1675	GCTGCCACCTTCGACGACTGCCTGTACGCTCTTTGCGTGGTAGACACCAT				13qA4	Mus musculus glucose-fructose oxidoreductase domain containing 1 (Gfod1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AI850995; 9630032O13	AI850995; 9630032O13
Mus musculus	RefSeq	ILMN_216029	ILMN_216029	GPR97	NM_173036.2	NM_173036.2		54672	40789244	NM_173036.2	Gpr97	NP_766624.2	ILMN_2666491	002650739	S	1679	GCAGTTTGCTCTCACTTCTGGCTGGTTTGTGTGACCTTGAACAGCTCCCT	8	+	97568430-97568479	8qD1	Mus musculus G protein-coupled receptor 97 (Gpr97), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AW214383; A030001G24Rik; Pb99; Pb1	AW214383; A030001G24Rik; Pb99; Pb1
Mus musculus	RefSeq	ILMN_216029	ILMN_216029	GPR97	NM_173036.2	NM_173036.2		54672	40789244	NM_173036.2	Gpr97	NP_766624.2	ILMN_2666492	001170689	S	1686	TGCTCTCACTTCTGGCTGGTTTGTGTGACCTTGAACAGCTCCCTACTTCC	8	+	97568437-97568486	8qD1	Mus musculus G protein-coupled receptor 97 (Gpr97), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AW214383; A030001G24Rik; Pb99; Pb1	AW214383; A030001G24Rik; Pb99; Pb1
Mus musculus	RefSeq	ILMN_227959	ILMN_227959	SRP54	NM_011899.3	NM_011899.3		24067	89337278	NM_011899.3	Srp54	NP_036029.2	ILMN_2852380	001050273	S	241	CGCCGGCCCTGTGGGGCCACGGCTTTAGTGGCGCCTTTTGCGAGTTCACA	12	+	56181682-56181723:56190157-56190164	12qC1	Mus musculus signal recognition particle 54 (Srp54), mRNA.				54kDa	54kDa
Mus musculus	RefSeq	ILMN_221138	ILMN_221138	FANCI	NM_145946.2	NM_145946.2		208836	126722699	NM_145946.2	Fanci	NP_666058.2	ILMN_2731473	002350044	S	3923	CGGGACTTCAAGATCAAAGGCAGTGTCCTCGACATGGTTCTTCGAGAGGA	7	+	86593995-86594044	7qD3	Mus musculus Fanconi anemia, complementation group I (Fanci), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]		MGC38195; MGC38407	MGC38195; MGC38407
Mus musculus	RefSeq	ILMN_200939	ILMN_200939	LOC384663	XM_357775.1	XM_357775.1			38087179	XM_357775.1	LOC384663		ILMN_2540542	004040390	S	143	CAGAGCATGCATGGGAAAGAACACGCTTTGAGAACCTGGGTCCCCAATTA										
Mus musculus	RefSeq	ILMN_220080	ILMN_220080	OASL1	NM_145209.2	NM_145209.2		231655	31981750	NM_145209.2	Oasl1	NP_660210.1	ILMN_2793464	004780253	S	1883	AGCTGGCCTCACAGACTATTCTCACATGTTCAGAGAAAGCCAAACCATCT	5	+	115198669-115198718	5qF	Mus musculus 2'-5' oligoadenylate synthetase-like 1 (Oasl1), mRNA.			Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	7530414C13Rik; oasl9	7530414C13Rik; oasl9
Mus musculus	MEEBO	ILMN_210991	ILMN_210991	0610037L13RIK	scl074098.7_10	NM_028754.1			21539638	NM_028754.1	0610037L13Rik		ILMN_2622630	003840519	S	221	AAATCGCACTGCAGCTCAAAGCCACGCTGGAGAACGTCACGAACCTTCGG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_214770	ILMN_214770	KLRI2	NM_177155.3	NM_177155.3		320407	142358946	NM_177155.3	Klri2	NP_796129.1	ILMN_2651722	000430538	S	3750	CCTGATGTTGTCCAGTGAGCTTACTGTTTTGCAATTAAATCCCGTTTCTG	6	-	129679158-129679207	6qF3	Mus musculus killer cell lectin-like receptor family I member 2 (Klri2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	A530090P03Rik	A530090P03Rik
Mus musculus	MEEBO	ILMN_223545	ILMN_223545	JMJD1C	scl0320451.1_0	XM_354543.1			38090497	XM_354543.1	Jmjd1c		ILMN_2765550	007330463	S	477	GCCAGCTATATTTACTGACCTTTAAAGCCTTGGCTTGGATTGCTGAGATT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200695	ILMN_231789	EFCAB4B	NM_001033464.3	NM_001033464.3		381812	146198659	NM_001033464.3	Efcab4b	NP_001028636.1	ILMN_1240788	002140273	S	924	GGAGTTGGAAAAGAAGCTGAGCGCCAAGGAGCAGGAGCTGGAGCGACTCA				6qF3	Mus musculus EF-hand calcium binding domain 4B (Efcab4b), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Gm1073	Gm1073
Mus musculus	MEEBO	ILMN_223137	ILMN_223137	2310079P12RIK	scl41530.4.1_0	XM_203577.2			38091358	XM_203577.2	2310079P12Rik		ILMN_2759792	000150537	S	877	TGTGAGCCGACACTTCAGGAACATACCAGTGAATGAGAAAGAGACGCTTG										
Mus musculus	RefSeq	ILMN_196728	ILMN_196728	HIST1H2AG	NM_178186.2	NM_178186.2		319167	67972648	NM_178186.2	Hist1h2ag	NP_835493.1	ILMN_2981801	000070546	S	125	CTCCGCAAGGGCAACTACTCGGAGCGCGTGGGCGCCGGCGCCCCGGTCTA	13	-	22134644-22134693	13qA3.1	Mus musculus histone cluster 1, H2ag (Hist1h2ag), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185629	ILMN_261193	SLC10A1	NM_011387.1	NM_011387.1		20493	6755527	NM_011387.1	Slc10a1	NP_035517.1	ILMN_2600147	004890121	S	1041	AGATTCCAAGTAGGAACTGGAACCAGGTAAAACAGCATGCCAGCGACTTT	12	-	82056799-82056848	12qD1	Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 1 (Slc10a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	Ntcp	Ntcp
Mus musculus	RefSeq	ILMN_223563	ILMN_223563	LRRC42	NM_029985.2	NM_029985.2		77809	84872223	NM_029985.2	Lrrc42	NP_084261.1	ILMN_2765834	002360021	S	1017	CGCTGGAATTGGATACCTGTTTTCATTTAGAAAATTAAATTGCTTGGATA	4	-	106912336-106912385	4qC7	Mus musculus leucine rich repeat containing 42 (Lrrc42), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA536996; A930011F22Rik	AA536996; A930011F22Rik
Mus musculus	MEEBO	ILMN_191986	ILMN_191986	A930027G11RIK	scl078290.3_272						A930027G11Rik		ILMN_2483957	005270450	S	13	TGAACGCCGGGCGCGATGTGCCGCCCGCAAAGTTGCTGACCGACAAAGAG										
Mus musculus	MEEBO	ILMN_188325	ILMN_188325	ZMYM1	scl23806.12_461				49227134	NM_026670	Zmym1		ILMN_1229914	001230048	S	1	AGCCTGGCACAGCGGCACACTTTCCTCCAGGACTGTGACTCATTGGTAAC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_216220	ILMN_216220	2700049A03RIK	scl43130.32.1_184	XM_126944.3			38050417	XM_126944.3	2700049A03Rik		ILMN_2668630	004830341	S	5590	TGAAGGCTTACAAGGTTCATGAAGACATGTCACTCTGGCTGCAGACCATG										
Mus musculus	RefSeq	ILMN_199695	ILMN_199695	LOC383826	XM_357280.1	XM_357280.1			38076197	XM_357280.1	LOC383826		ILMN_1216011	006980427	S	296	GCTACTGGCCCGTGCTGAGAAGAAAGAACAAGAAGGCTCAGCTGGTGGTG										
Mus musculus	RefSeq	ILMN_219120	ILMN_219120	NXPH3	NM_130858.3	NM_130858.3		104079	141803004	NM_130858.3	Nxph3	NP_570928.1	ILMN_1227583	001660551	S	1441	GCTATTCAGAAGGAGGACAGTGGTCAGCAAAGGGGAGTCCAACTGTGTAG	11	-	95371762-95371811	11qD	Mus musculus neurexophilin 3 (Nxph3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221926	ILMN_221926	GADD45A	NM_007836.1	NM_007836.1		13197	6681148	NM_007836.1	Gadd45a	NP_031862.1	ILMN_2947568	000580609	S	739	CCCCACGCTGATGCAAGGATTACAGAAACTGATGTCAAGGGGCCGAGTTC	6	-	66985525-66985574	6qC1	Mus musculus growth arrest and DNA-damage-inducible 45 alpha (Gadd45a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The cell cycle process whereby centrosome duplication and separation takes place. The centrosome cycle can operate with a considerable degree of independence from other processes of the cell cycle [goid 7098] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA545191; Ddit1; GADD45	AA545191; Ddit1; GADD45
Mus musculus	RefSeq	ILMN_221926	ILMN_221926	GADD45A	NM_007836.1	NM_007836.1		13197	6681148	NM_007836.1	Gadd45a	NP_031862.1	ILMN_2742152	003890332	S	604	CCGGGAAAGTCGCTACATGGATCAGTGGGTGCCCGTGATTAATCTCCCGG	6	-	66985660-66985709	6qC1	Mus musculus growth arrest and DNA-damage-inducible 45 alpha (Gadd45a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; The cell cycle process whereby centrosome duplication and separation takes place. The centrosome cycle can operate with a considerable degree of independence from other processes of the cell cycle [goid 7098] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA545191; Ddit1; GADD45	AA545191; Ddit1; GADD45
Mus musculus	RefSeq	ILMN_196721	ILMN_196721	HIST1H4D	NM_175654.1	NM_175654.1		319156	30089713	NM_175654.1	Hist1h4d	NP_783585.1	ILMN_1251885	001410368	S	1	ATGTCTGGACGCGGGAAAGGCGGCAAGGGTCTTGGTAAGGGTGGTGCTAA	13	+	23673471-23673520	13qA3.1	Mus musculus histone cluster 1, H4d (Hist1h4d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223898	ILMN_223898	GALNS	scl050917.1_181				31980653	NM_016722	Galns		ILMN_2771201	003120632	S	2248	AGACTGAGAGGAAGAATAAAGGAACAGGAGGGGGTTAGCTCTGGTAGCCC						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISO]; Catalysis of the reaction: hydrolysis of the 6-sulfate groups of the N-acetyl-D-galactosamine 6-sulfate units of chondroitin sulfate and of the D-galactose 6-sulfate units of keratan sulfate [goid 43890] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210828	ILMN_210828	RBM8A	NM_025875.1	NM_025875.1		60365	13385355	NM_025875.1	Rbm8a	NP_080151.1	ILMN_1252850	001710152	S	1595	GGTATGTCTGTAGCAGCTGGTTTGTTGTTTGTGTAGGTCCCTATGTGACC	3	+	96436196-96436245	3qF2.1	Mus musculus RNA binding motif protein 8a (Rbm8a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AA673428; 2310057C03Rik; Rbm8	AA673428; 2310057C03Rik; Rbm8
Mus musculus	RefSeq	ILMN_210828	ILMN_210828	RBM8A	NM_025875.1	NM_025875.1		60365	13385355	NM_025875.1	Rbm8a	NP_080151.1	ILMN_2609615	004900040	S	1597	GTATGTCTGTAGCAGCTGGTTTGTTGTTTGTGTAGGTCCCTATGTGACCC	3	+	96436198-96436247	3qF2.1	Mus musculus RNA binding motif protein 8a (Rbm8a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AA673428; 2310057C03Rik; Rbm8	AA673428; 2310057C03Rik; Rbm8
Mus musculus	RefSeq	ILMN_217611	ILMN_325345	ST7	NM_001083315.1	NM_001083315.1		64213	134032044	NM_001083315.1	St7	NP_001076784.1	ILMN_2729574	005220278	S	2015	CTGAGATTTTAAACTGCTCATGGACTATCAGTTCCTTATTAAAGGCTGGT	6	+	17892867-17892916	6qA2	Mus musculus Suppression of tumorigenicity 7 (St7), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RAY1; Fam4a2; MGC118540; TSG7; 9430001H04Rik; SEN4; HELG	RAY1; Fam4a2; MGC118540; TSG7; 9430001H04Rik; SEN4; HELG
Mus musculus	RefSeq	ILMN_217611	ILMN_325345	ST7	NM_001083315.1	NM_001083315.1		64213	134032044	NM_001083315.1	St7	NP_001076784.1	ILMN_1229827	005900309	S	1830	TTGTTTGCCCCCTTGAACTTTGTTATGGAGAAAGTGGAAAGCATCCTCCC	6	+	17892682-17892731	6qA2	Mus musculus Suppression of tumorigenicity 7 (St7), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RAY1; Fam4a2; MGC118540; TSG7; 9430001H04Rik; SEN4; HELG	RAY1; Fam4a2; MGC118540; TSG7; 9430001H04Rik; SEN4; HELG
Mus musculus	RefSeq	ILMN_234811	ILMN_234811	CYP2C40	NM_010004.1	NM_010004.1		13099	6857778	NM_010004.1	Cyp2c40	NP_034134.1	ILMN_3107448	003850273	A	744	GAAAATAAAAGAACATGAAGAATCATTGGATGTTACAAATCCTCGGGACT	19	-	39877001-39877050	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 40 (Cyp2c40), mRNA. XM_924983	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	AI265721; AI662255	AI265721; AI662255
Mus musculus	RefSeq	ILMN_215536	ILMN_215536	SEPT1	NM_017461.2	NM_017461.2		54204	148277023	NM_017461.2	Sept1	NP_059489.2	ILMN_1225633	000450563	S	977	GTGCCACAGAGATCCCGCTGCCCATGTTGCCTCTGGCTGACACTGAAAAG				7qF3	Mus musculus septin 1 (Sept1), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Diff6; Pnutl3	Diff6; Pnutl3
Mus musculus	Riken	ILMN_206199	ILMN_206199	MATN2	ri|C130007L19|PX00167D09|AK081339|3193					AK081339	Matn2		ILMN_1253401	004780386	S	2518	CAGCCTCAAACTCACAGAGATCTGCCTGCCTTTGCCCCCCAATTGTTGGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]				
Mus musculus	Riken	ILMN_205148	ILMN_205148	A130047F11RIK	ri|A130047F11|PX00123N11|AK037758|2757					AK037758	A130047F11Rik		ILMN_1234541	006330274	S	2516	GATCACCAGAGTCCTGCAGCTTACGGTGGTGTGTTTTGTGGTTCACCCCC										
Mus musculus	Riken	ILMN_203093	ILMN_203093	6330401K01RIK	ri|6330401K01|PX00007J08|AK031803|1054					AK031803	6330401K01Rik		ILMN_1226596	004010537	S	555	CCCCCGGTCCAGGCCAATCTGAACAACGATGGGGAATAGTATGGTCTGCA										
Mus musculus	RefSeq	ILMN_212813	ILMN_212813	ABI3BP	NM_178790.3	NM_178790.3		320712	62177134	NM_178790.3	Abi3bp	NP_848905.2	ILMN_3132588	004490730	A	3091	GTCGCACAGGACAGCAACTCACCTCTGAACAGTTACCCACCAAAGAAGGC	16	+	56688252-56688299:56689047-56689048	16qC1.1	Mus musculus ABI gene family, member 3 (NESH) binding protein (Abi3bp), transcript variant 1, mRNA.				D930038M13Rik; BG172926; TARSH; 5033411B22Rik; AI506287	D930038M13Rik; BG172926; TARSH; 5033411B22Rik; AI506287
Mus musculus	RefSeq	ILMN_212813	ILMN_212813	ABI3BP	NM_178790.3	NM_178790.3		320712	62177134	NM_178790.3	Abi3bp	NP_848905.2	ILMN_2630626	002810576	S	771	ACTCACAGGGCTTCAACCAAATCCCCAGACAAGACTCCTTTTGGGGGAAC	16	+	56588073-56588122	16qC1.1	Mus musculus ABI gene family, member 3 (NESH) binding protein (Abi3bp), transcript variant 1, mRNA.				D930038M13Rik; BG172926; TARSH; 5033411B22Rik; AI506287	D930038M13Rik; BG172926; TARSH; 5033411B22Rik; AI506287
Mus musculus	RefSeq	ILMN_210641	ILMN_210641	XRCC6	NM_010247.2	NM_010247.2		14375	145587103	NM_010247.2	Xrcc6	NP_034377.2	ILMN_1216412	004010750	S	241	GATGCCTCCAGGGCTATGTTCGAATCTCAGGGTGAAGATGAACTCACACC				15qE1	Mus musculus X-ray repair complementing defective repair in Chinese hamster cells 6 (Xrcc6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process by which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33151] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50769] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	70kDa; Ku70; G22p1	70kDa; Ku70; G22p1
Mus musculus	RefSeq	ILMN_210641	ILMN_210641	XRCC6	NM_010247.2	NM_010247.2		14375	145587103	NM_010247.2	Xrcc6	NP_034377.2	ILMN_1247814	003940152	S	1693	GAACTTGTCTATCCTCCAGGTTATAATCCCGAGGGAAAAGTTGCCAAGAG				15qE1	Mus musculus X-ray repair complementing defective repair in Chinese hamster cells 6 (Xrcc6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process by which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33151] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50769] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	70kDa; Ku70; G22p1	70kDa; Ku70; G22p1
Mus musculus	RefSeq	ILMN_208760	ILMN_208760	IGSF8	NM_080419.1	NM_080419.1		140559	32189433	NM_080419.1	Igsf8	NP_536344.1	ILMN_2699160	005720746	S	867	AGGGACTGATCGGTACCGAATGGTGGTTGGGGGTGCCCAGGCTGGAGACT	1	+	174247787-174247836	1qH3	Mus musculus immunoglobulin superfamily, member 8 (Igsf8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]	AU041109; AA033172; PGRL; EWI-2; ESTM34; R75384; KCT-4	AU041109; AA033172; PGRL; EWI-2; ESTM34; R75384; KCT-4
Mus musculus	RefSeq	ILMN_185746	ILMN_185746	V1RH17	NM_145850.1	NM_145850.1		252912	22095332	NM_145850.1	V1rh17	NP_665849.1	ILMN_2878014	002320601	S	443	CCATTAGAAGTACAGGTCTGAATATATCACAGCTTAGGAATGGCGACAAC	13	+	22180189-22180238	13qA3.1	Mus musculus vomeronasal 1 receptor, H17 (V1rh17), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_185746	ILMN_185746	V1RH17	NM_145850.1	NM_145850.1		252912	22095332	NM_145850.1	V1rh17	NP_665849.1	ILMN_2878020	004760670	S	335	CAGGATCTGGGTGGAGGAGGCTCAGGCCAAAGTCTGCATGGCACATCCTT	13	+	22180081-22180130	13qA3.1	Mus musculus vomeronasal 1 receptor, H17 (V1rh17), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_221046	ILMN_221046	NTHL1	NM_008743.1	NM_008743.1		18207	6679145	NM_008743.1	Nthl1	NP_032769.1	ILMN_1238562	006860678	S	957	CTTCCTCTGGCTAGTGTCTGTGAGGTGCCTTTGTGGGGCGGGGTGGTAAA	17	+	24775688-24775737	17qA3.3	Mus musculus nth (endonuclease III)-like 1 (E.coli) (Nthl1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The endonucleolytic cleavage of the damaged strand of DNA 5' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision follows the incision formed 3' to the site of damage [goid 6296] [evidence IDA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [evidence IDA]	Nth1; Octs3	Nth1; Octs3
Mus musculus	RefSeq	ILMN_221435	ILMN_221435	AGR2	NM_011783.2	NM_011783.2		23795	118130044	NM_011783.2	Agr2	NP_035913.1	ILMN_2735583	006960333	S	679	CACCCACAGGTGGGGAAACAATATTATTATCTACTACAGTGAAGCATGAT	12	+	36730587-36730636	12qA3	Mus musculus anterior gradient 2 (Xenopus laevis) (Agr2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			HAG-2; Agr2h; mAG-2; XAG-2; Gob-4	HAG-2; Agr2h; mAG-2; XAG-2; Gob-4
Mus musculus	RefSeq	ILMN_222430	ILMN_222430	ITGA9	NM_133721.1	NM_133721.1		104099	19526903	NM_133721.1	Itga9	NP_598482.1	ILMN_2749529	001450121	S	4694	GGGCACCCTCAAGTAAGGAGATCCACAAATCATGCAAAGAACTCTGAGCC	9	+	118807814-118807863	9qF3	Mus musculus integrin alpha 9 (Itga9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D9Ertd428e; D130073C02; (alpha)9; 2610002H11Rik	D9Ertd428e; D130073C02; (alpha)9; 2610002H11Rik
Mus musculus	RefSeq	ILMN_216604	ILMN_216604	CDCA7	NM_025866.3	NM_025866.3		66953	146134935	NM_025866.3	Cdca7	NP_080142.1	ILMN_1221568	006510500	S	2073	TGATGGGAAGTGGCCTTTTAGAGATGGGTAGCTTTGAACCTCTCTGCCAG				2qC3	Mus musculus cell division cycle associated 7 (Cdca7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence ISO]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	JPO1; 2310021G01Rik; AU044109	JPO1; 2310021G01Rik; AU044109
Mus musculus	RefSeq	ILMN_219922	ILMN_219922	DMRTC1A	NM_027591.1	NM_027591.1		70887	21735456	NM_027591.1	Dmrtc1a	NP_081867.1	ILMN_3066821	004900707	I	172	GGCTGCTGCTCATCCATCACACATGCACGTCAAGAAATTGGCTGTAGAAG	X	-	99109441-99109490	XqD	Mus musculus DMRT-like family C1a (Dmrtc1a), transcript variant 1, mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		DMRTC1; 4921520P21Rik; RP23-76A20.9; Dmrt8.1; 1700030H14Rik	DMRTC1; 4921520P21Rik; RP23-76A20.9; Dmrt8.1; 1700030H14Rik
Mus musculus	MEEBO	ILMN_186552	ILMN_186552	9790357_5448_RC	9790357_5448_rc						9790357_5448_rc		ILMN_2436498	001340181	S	19	CTAAAAGTAAATTGTTCTATATCTACCATTTCGATGACATGTGGAAACTC										
Mus musculus	RefSeq	ILMN_209892	ILMN_209892	GJB4	NM_008127.3	NM_008127.3		14621	49355797	NM_008127.3	Gjb4	NP_032153.1	ILMN_2600190	004900088	S	991	AGTGAGGTCGTCTACCTGGTGGGCAAGAGATGCATGGAGGTCTTCCGTCC	4	-	127028734-127028783	4qD2.2	Mus musculus gap junction protein, beta 4 (Gjb4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]		Cnx30.3; Gjb-4; Cx30.3	Cnx30.3; Gjb-4; Cx30.3
Mus musculus	RefSeq	ILMN_216423	ILMN_216423	SNRP70	NM_009224.4	NM_009224.4		20637	118130481	NM_009224.4	Snrp70	NP_033250.3	ILMN_2670959	003400181	S	754	GTGGGGCAGATGTGAATATCAGGCATTCGGGCCGAGATGACACTTCCCGA	7	-	52632736-52632785	7qB4	Mus musculus U1 small nuclear ribonucleoprotein polypeptide A (Snrp70), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rnulp70; R74807; 70kDa; 3200002N22Rik; Srnp70; SNRNP70; 2700022N21Rik; U1-70; AI325098	Rnulp70; R74807; 70kDa; 3200002N22Rik; Srnp70; SNRNP70; 2700022N21Rik; U1-70; AI325098
Mus musculus	RefSeq	ILMN_220162	ILMN_220162	OGN	NM_008760.2	NM_008760.2		18295	31543365	NM_008760.2	Ogn	NP_032786.1	ILMN_2859613	000160402	S	2330	TGTGTCCATGACTCATTTTCTCTGTGACTGAACGCTCACCAAGAGCACTG	13	+	49636227-49636276	13qA5	Mus musculus osteoglycin (Ogn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	OG; SLRR3A; mimecan; 3110079A16Rik; mimican; OIF	OG; SLRR3A; mimecan; 3110079A16Rik; mimican; OIF
Mus musculus	RefSeq	ILMN_220162	ILMN_220162	OGN	NM_008760.2	NM_008760.2		18295	31543365	NM_008760.2	Ogn	NP_032786.1	ILMN_2859619	000770441	S	2228	GCATCTGTGAACTGTAAGGCCACAACTATTGCTCTAATAATGTCAACTAG	13	+	49636125-49636174	13qA5	Mus musculus osteoglycin (Ogn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	OG; SLRR3A; mimecan; 3110079A16Rik; mimican; OIF	OG; SLRR3A; mimecan; 3110079A16Rik; mimican; OIF
Mus musculus	RefSeq	ILMN_213922	ILMN_213922	IER5	NM_010500.1	NM_010500.1		15939	6754283	NM_010500.1	Ier5	NP_034630.1	ILMN_2642275	006590192	S	2039	CTCCTTCTCTGTATTGATTTTTGTATAAAAATGTAACTTTACGTGTCTAA	1	-	156944678-156944727	1qG3	Mus musculus immediate early response 5 (Ier5), mRNA.					
Mus musculus	Riken	ILMN_202544	ILMN_202544	JCAM2	ri|2410167M24|ZX00082O07|AK010826|1094					AK010826	Jcam2		ILMN_2550414	004610463	S	805	CGGTAATTAGCCAGCGTGAACCCTGAATTTTAAAAGTCCATGCTAGGGTC										
Mus musculus	RefSeq	ILMN_220107	ILMN_220107	HERC2	NM_010418.2	NM_010418.2		15204	134288897	NM_010418.2	Herc2	NP_034548.2	ILMN_2717727	007100451	S	15175	CCAGTCAGGCCTCTTCTCCCCAGGTGTACCATTTTAGCATATGCATTATG	7	+	63486997-63487046	7qB5	Mus musculus hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2 (Herc2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	D15F32S1h; mKIAA0393; KIAA0393; jdf2; rjs; D7H15F32S1; D7H15F37S1	D15F32S1h; mKIAA0393; KIAA0393; jdf2; rjs; D7H15F32S1; D7H15F37S1
Mus musculus	RefSeq	ILMN_196974	ILMN_196974	LOC217503	XM_138022.3	XM_138022.3			38050501	XM_138022.3	LOC217503		ILMN_2526448	001190161	S	58	GTGGTCGACTTTGCAGAGGGTGGGAGCAGAGGCACACATATCTATGACCC										
Mus musculus	MEEBO	ILMN_189772	ILMN_189772	C230029D21RIK	scl51102.1.1_269				31342832	NM_177116	C230029D21Rik		ILMN_1243664	007160725	S	1	GGCCTTCGAGTTGATTGCAGTGTGCGTGTTATCAAGGATGGGCTTTCTGT										
Mus musculus	MEEBO	ILMN_189772	ILMN_189772	C230029D21RIK	scl51102.1.1_269				31342832	NM_177116	C230029D21Rik		ILMN_2708078	005360437	S	2889	TGCTTGATCGATATACCCCATTTTTCACTATCAGACATGTACTTAGGTAC										
Mus musculus	RefSeq	ILMN_228306	ILMN_228306	ZSCAN10	NM_001033425.1	NM_001033425.1		332221	85701932	NM_001033425.1	Zscan10	NP_001028597.1	ILMN_2858050	007380398	S	2503	CCGGGAATCGCTGTACTAACTGCTTCACCCATGTTCCAGCAACCTTGTCC	17	+	23338439-23338456:23338457-23338488	17qA3.3	Mus musculus zinc finger and SCAN domains 10 (Zscan10), mRNA. XM_908570 XM_920921 XM_920929 XM_920934 XM_920942 XM_920949	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BC068284; Znf206; Zkscan10; Zfp206	BC068284; Znf206; Zkscan10; Zfp206
Mus musculus	RefSeq	ILMN_222095	ILMN_222095	VEPH1	NM_028357.1	NM_028357.1		72789	22003851	NM_028357.1	Veph1	NP_082633.1	ILMN_2744514	003450670	S	1076	GCAGGGTTCTCAGTAAACCTCACGCCCTCGCAACTCTGGTATTAACTCCA	3	-	66144850-66144899	3qE1	Mus musculus ventricular zone expressed PH domain homolog 1 (zebrafish) (Veph1), transcript variant Veph-B, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			Veph; 2810471M23Rik	Veph; 2810471M23Rik
Mus musculus	RefSeq	ILMN_244245	ILMN_244245	RSL1	NM_001013769.1	NM_001013769.1		380855	71480077	NM_001013769.1	Rsl1	NP_001013791.1	ILMN_2788963	001050026	S	1971	TATTTTTCTCAACAGTCTTTAAAAGTTTATACTTCTTCAGTCCTTAAAAG	13	+	67284360-67284409	13qB3	Mus musculus regulator of sex limited protein 1 (Rsl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	rslcan-9; MGC118400	rslcan-9; MGC118400
Mus musculus	RefSeq	ILMN_225632	ILMN_225632	ZFP26	NM_011753.1	NM_011753.1		22688	124249205	NM_011753.1	Zfp26	NP_035883.1	ILMN_2945607	004490333	S	2348	GAGGCCCTATCCATGTACAGAATGTGAGAAAGCCTTCACCAGCTTCGCTC				9qA3	Mus musculus zinc finger protein 26 (Zfp26), mRNA. XM_974728 XM_977451 XM_977486	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	5033428C05Rik; KRAB15; mszf52; Zfp81-rs1; KIAA4196; Zfp-26; mkr-3; mszf14; Zfp70; mKIAA4196	5033428C05Rik; KRAB15; mszf52; Zfp81-rs1; KIAA4196; Zfp-26; mkr-3; mszf14; Zfp70; mKIAA4196
Mus musculus	MEEBO	ILMN_208698	ILMN_208698	PRKWNK3	scl54558.5.1_171	XM_205148.3			38086800	XM_205148.3	Prkwnk3		ILMN_1224354	001980577	S	7253	TGACGGGAAGGAAACCTAACTGTGAACGTTTAAAAGGCACTTCCGCTGTG										
Mus musculus	RefSeq	ILMN_252690	ILMN_252690	EG386551	NM_001003664.1	NM_001003664.1		386551	51092302	NM_001003664.1	EG386551	NP_001003664.1	ILMN_2963762	004590044	S	449	CTGGCGTGAACAACCCAGACCTGCTCCAATGCCTGGATGCCCCACTGCTG	6	+	41367935-41367984	6qB1	Mus musculus predicted gene, EG386551 (EG386551), mRNA.				Try10l	Try10l
Mus musculus	RefSeq	ILMN_230015	ILMN_230015	RPS27A	NM_001033865.1	NM_001033865.1		78294	76443693	NM_001033865.1	Rps27a	NP_001029037.1	ILMN_3122437	005550431	A	64	AAATCTGGCACTGCGTTAGACAGCCGCGATTCCGCTGCAGCGCGCAGGCA	11	-	29447927-29447976	11qA3.3	Mus musculus ribosomal protein S27a (Rps27a), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	0610006J14Rik	0610006J14Rik
Mus musculus	RefSeq	ILMN_230015	ILMN_230015	RPS27A	NM_001033865.1	NM_001033865.1		78294	76443693	NM_001033865.1	Rps27a	NP_001029037.1	ILMN_3046846	005290577	I	244	GCGTCGCTCTCACGGGTGTCGTCGGATCTAATCCGTCTCTTTTCGAATGC	11	-	29447747-29447796	11qA3.3	Mus musculus ribosomal protein S27a (Rps27a), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	0610006J14Rik	0610006J14Rik
Mus musculus	MEEBO	ILMN_191334	ILMN_191334	DGKD	scl0227333.5_1						Dgkd		ILMN_1246148	007550730	S	1	GACCATCTGGAGCAGATTCCTCTTGTATTGTTATGTACATAGTCTGCATC						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]	The chemical reactions and pathways involving diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues. DAG is a normal intermediate in the biosynthesis of phosphatidyl phospholipids and is released from them by phospholipase C activity. DAG from phosphatidyl inositol polyphosphates is important in signal transduction [goid 46339] [evidence ISO]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISO]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence ISO]		
Mus musculus	RefSeq	ILMN_220085	ILMN_312418	1700003E16RIK	XM_001478332.1	XM_001478332.1		71837	149255677	XM_001478332.1	1700003E16Rik	XP_001478382.1	ILMN_1231608	002510424	S	1852	GCAACCCATCCAGACAGGTGTGTCCAAGCCTCAGGTGATTATGAAACAGA				6qC3	PREDICTED: Mus musculus RIKEN cDNA 1700003E16 gene, transcript variant 1 (1700003E16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_222117	ILMN_260611	FATE1	NR_003243.1	NR_003243.1		77905	116089270	NR_003243.1	Fate1		ILMN_2744859	004480327	S	15968	GAGTAGGGTTTGGCTTTGTATCCCTCCCTTGATTGTTTCCATACCACTCA	X	+	69234292-69234341	XqA7.3	Mus musculus fetal and adult testis expressed 1 (Fate1) on chromosome X.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9230118O15Rik	9230118O15Rik
Mus musculus	RefSeq	ILMN_192309	ILMN_225319	YPEL5	NM_027166.5	NM_027166.5		383295	146141182	NM_027166.5	Ypel5	NP_081442.1	ILMN_1251071	002490603	S	2030	CCTGTGGTGCCGATTTCTAGTCGCATGCCTTACCTACAGCACCATGTGCA				17qE1.3	Mus musculus yippee-like 5 (Drosophila) (Ypel5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CGI-127; 2310076K21Rik	CGI-127; 2310076K21Rik
Mus musculus	RefSeq	ILMN_200527	ILMN_225319	YPEL5	NM_027166.5	NM_027166.5		383295	146141182	NM_027166.5	Ypel5	NP_081442.1	ILMN_1215341	005340424	S	396	AGGAAGGCCGTGTGATCCTGGAACGTGCACTAGTTCGAGAGAGTGAAGGC				17qE1.3	Mus musculus yippee-like 5 (Drosophila) (Ypel5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CGI-127; 2310076K21Rik	CGI-127; 2310076K21Rik
Mus musculus	RefSeq	ILMN_223553	ILMN_223553	DBI	NM_007830.3	NM_007830.3		13167	83921597	NM_007830.3	Dbi	NP_031856.1	ILMN_3071356	003460451	I	3	CCCGAGCTCAGTTGGAACGCCGGGGTTGTGCTTTTAAAGGCGCTAGCTGG	1	-	122017604-122017653	1qE2.3	Mus musculus diazepam binding inhibitor (Dbi), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]	ACBD1; Acbp; EP; endozepine	ACBD1; Acbp; EP; endozepine
Mus musculus	RefSeq	ILMN_223553	ILMN_223553	DBI	NM_007830.3	NM_007830.3		13167	83921597	NM_007830.3	Dbi	NP_031856.1	ILMN_1215469	004490470	S	484	GGGCCAGCGTTAACCTCTGCTCCTCCTCCCTCTGTAGTTTTTACCTACAA	1	-	122009893-122009942	1qE2.3	Mus musculus diazepam binding inhibitor (Dbi), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]	ACBD1; Acbp; EP; endozepine	ACBD1; Acbp; EP; endozepine
Mus musculus	RefSeq	ILMN_223553	ILMN_223553	DBI	NM_007830.3	NM_007830.3		13167	83921597	NM_007830.3	Dbi	NP_031856.1	ILMN_3150159	003940411	A	279	GGGCAAAGCCAAGTGGGACTCGTGGAACAAGCTGAAAGGGACTTCCAAGG	1	-	122010098-122010110:122012963-122012999	1qE2.3	Mus musculus diazepam binding inhibitor (Dbi), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]	ACBD1; Acbp; EP; endozepine	ACBD1; Acbp; EP; endozepine
Mus musculus	RefSeq	ILMN_185687	ILMN_185687	ZDHHC14	NM_146073.3	NM_146073.3		224454	51799027	NM_146073.3	Zdhhc14	NP_666185.3	ILMN_1240332	001710333	S	2745	TACTTTCCAATGTGACAGACCGAACCCGGTGGGTAATGCCATCCTTCGCG	17	+	5753521-5753570	17qA1	Mus musculus zinc finger, DHHC domain containing 14 (Zdhhc14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B530001K09Rik; New1cp; MGC29194	B530001K09Rik; New1cp; MGC29194
Mus musculus	RefSeq	ILMN_222265	ILMN_222265	TBCA	NM_009321.2	NM_009321.2		21371	118130449	NM_009321.2	Tbca	NP_033347.1	ILMN_2747103	004560047	S	199	CCCAGATTGCCAGCGTCGGTTAGAGGCTGCATATACTGATCTTCAGCAGA	13	+	95607095-95607144	13qD1	Mus musculus tubulin cofactor a (Tbca), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The aggregation and bonding together of alpha- and beta-tubulin to form a tubulin heterodimer [goid 7021] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211478	ILMN_211478	OLFR68	NM_013620.1	NM_013620.1		18369	7305350	NM_013620.1	Olfr68	NP_038648.1	ILMN_2900079	002810338	S	840	AGACCTTTACCTGTTAGTCCCACCTTTTCTGAACCCCATTGTTTATGGTG	7	-	103651275-103651324	7qE3	Mus musculus olfactory receptor 68 (Olfr68), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR22-3; 3'beta2; 3'[b]2	MOR22-3; 3'beta2; 3'[b]2
Mus musculus	RefSeq	ILMN_221143	ILMN_221143	BAT5	NM_178592.3	NM_178592.3		193742	118130607	NM_178592.3	Bat5	NP_848707.1	ILMN_2731523	007320056	S	1766	CTTTTGTGACTCTCTTCATGTTGCTGTTTATAGTCTGGCCCGTGGGGACA	17	+	35237291-35237340	17qB1	Mus musculus HLA-B associated transcript 5 (Bat5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			D17H6S82E; MGC19234; AI326074; Bat-5; NG26	D17H6S82E; MGC19234; AI326074; Bat-5; NG26
Mus musculus	RefSeq	ILMN_259510	ILMN_259510	RPS13	NM_026533.1	NM_026533.1		68052	13386033	NM_026533.1	Rps13	NP_080809.1	ILMN_2940017	001030612	S	61	GTCCCAGTCGGCGCTGCCCTACCGCCGTAGCGTCCCCACGTGGCTGAAGT	7	-	116124912-116124923:116125049-116125086	7qF1	Mus musculus ribosomal protein S13 (Rps13), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC118043; MGC102403; 2700063M04Rik	MGC118043; MGC102403; 2700063M04Rik
Mus musculus	RefSeq	ILMN_200573	ILMN_200573	LOC383367	XM_357011.1	XM_357011.1			38083862	XM_357011.1	LOC383367		ILMN_1252341	002760672	S	3	GGGGGTCCATGGGTCTCCACTTCAGGTTAGTACTCCAGTAGTTAAGCAAG										
Mus musculus	RefSeq	ILMN_196849	ILMN_196849	LOC238323	XM_138096.1	XM_138096.1			20909955	XM_138096.1	LOC238323		ILMN_1240213	006480167	S	1225	CCTGTATGAACTGCTCACAGGAATGTGGACTTCAGGGGAAGCATGTGGCG										
Mus musculus	RefSeq	ILMN_215164	ILMN_253441	FMNL2	NM_172409.2	NM_172409.2		71409	124378047	NM_172409.2	Fmnl2	NP_765997.2	ILMN_2656268	005960020	S	4786	CTGTGTTCATGTGAACCCCTTGGTGAAGGCCCCCTTTTCATGGATGTGTA	2	+	52992171-52992220	2qC1.1	Mus musculus formin-like 2 (Fmnl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Man; 5430425K04Rik	Man; 5430425K04Rik
Mus musculus	RefSeq	ILMN_211344	ILMN_211344	RANBP6	NM_177721.3	NM_177721.3		240614	53850663	NM_177721.3	Ranbp6	NP_808389.2	ILMN_2634985	005420242	S	4274	GTGTATGTGTATTACAAAACAGCTATCAATTTATGGTTAATTACATTAAA	19	-	29883120-29883169	19qC1	Mus musculus RAN binding protein 6 (Ranbp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C630001B19; FLJ11120	C630001B19; FLJ11120
Mus musculus	RefSeq	ILMN_211344	ILMN_211344	RANBP6	NM_177721.3	NM_177721.3		240614	53850663	NM_177721.3	Ranbp6	NP_808389.2	ILMN_2614861	002030041	S	2842	GACTACCGTTCCTTGTGTTCAGAAGCCGTTCCACTCTTGGTAAAAGTTAT	19	-	29884552-29884601	19qC1	Mus musculus RAN binding protein 6 (Ranbp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C630001B19; FLJ11120	C630001B19; FLJ11120
Mus musculus	RefSeq	ILMN_215857	ILMN_215857	CCS	NM_016892.3	NM_016892.3		12460	114326534	NM_016892.3	Ccs	NP_058588.1	ILMN_1253618	004540736	S	895	CCCCCAGCTCACCTCTAAACAGAGCCTCATGTCAGGTTATTTGGTCCTCG	19	-	4825478-4825510:4825511-4825527	19qA	Mus musculus copper chaperone for superoxide dismutase (Ccs), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered [goid 51353] [evidence IMP]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Ccsd	Ccsd
Mus musculus	RefSeq	ILMN_199421	ILMN_199421	OLFR498	NM_146307.1	NM_146307.1		258304	22129672	NM_146307.1	Olfr498	NP_666419.1	ILMN_2845946	003440091	S	550	TTTGCTCCTTTGTTGGAACTCTCCTGTTCTGATGTCACTGTTGCTGTTGT	7	+	115609389-115609438	7qE3	Mus musculus olfactory receptor 498 (Olfr498), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-36	MOR204-36
Mus musculus	RefSeq	ILMN_196829	ILMN_196829	LOC237826	XM_137666.1	XM_137666.1			20883375	XM_137666.1	LOC237826		ILMN_1247011	006620672	S	3046	CCTGAAGAGAACACCTGGTGCAAGAGGCAGAAGCAGGAAGCAGCCGCCTG										
Mus musculus	RefSeq	ILMN_223093	ILMN_223093	KCNJ9	NM_008429.2	NM_008429.2		16524	111607442	NM_008429.2	Kcnj9	NP_032455.2	ILMN_1242415	003460435	S	1229	AAACCTTTGAGGTGCCCACACCCTCGTGCAGTGCTCGGGAACTGGCAGAA	1	-	174253155-174253204	1qH3	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 9 (Kcnj9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA];  [goid 15467] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA]	Girk3; Kir3.3; mbGIRK3; 1700085N21Rik	Girk3; Kir3.3; mbGIRK3; 1700085N21Rik
Mus musculus	MEEBO	ILMN_184477	ILMN_184477	IGHV1S57_D13200_IG_HEAVY_VARIABLE_1S57_245	IGHV1S57_D13200_Ig_heavy_variable_1S57_245						IGHV1S57_D13200_Ig_heavy_variable_1S57_245		ILMN_2418950	000010072	S	13	CCTTCAAAGGATTGAATATGTTAATCCTTATAATGGTGGTACTGGCTACA										
Mus musculus	RefSeq	ILMN_201065	ILMN_201065	LOC381981	XM_356027.1	XM_356027.1			38088478	XM_356027.1	LOC381981		ILMN_2540952	003610014	S	101	GTGTCTAGGCAGGGGGCAGCACAGGAATTGTGAATGCTTAACAGCCCAGG										
Mus musculus	RefSeq	ILMN_222050	ILMN_222050	BCL2L11	NM_207680.2	NM_207680.2		12125	90093352	NM_207680.2	Bcl2l11	NP_997563.1	ILMN_1229255	002360689	S	545	GTGACAAGTCAACACAAACCCCAAGTCCTCCTTGCCAGGCCTTCAACCAC	2	+	127954685-127954734	2qF1	Mus musculus BCL2-like 11 (apoptosis facilitator) (Bcl2l11), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence IDA]	The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IMP]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Creation of the central hole of a tube in an anatomical structure through which gases and/or liquids flow [goid 35148] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IGI]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	1500006F24Rik; Bod; Bim	1500006F24Rik; Bod; Bim
Mus musculus	RefSeq	ILMN_222050	ILMN_222050	BCL2L11	NM_207680.2	NM_207680.2		12125	90093352	NM_207680.2	Bcl2l11	NP_997563.1	ILMN_3078327	004060747	I	422	GCCCTGGCCCTTTTGCTACCAGATCCCCACTTTTCATCTTTGTGAGAAGA	2	+	127954562-127954611	2qF1	Mus musculus BCL2-like 11 (apoptosis facilitator) (Bcl2l11), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence IDA]	The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IMP]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Creation of the central hole of a tube in an anatomical structure through which gases and/or liquids flow [goid 35148] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IGI]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	1500006F24Rik; Bod; Bim	1500006F24Rik; Bod; Bim
Mus musculus	RefSeq	ILMN_222050	ILMN_222050	BCL2L11	NM_207680.2	NM_207680.2		12125	90093352	NM_207680.2	Bcl2l11	NP_997563.1	ILMN_3157568	005820168	A	4582	TGATTCAGCCTGGTGCCTGTGTGTGTCCATCCGCTCAGCACGTCTGCATG	2	+	127987828-127987877	2qF1	Mus musculus BCL2-like 11 (apoptosis facilitator) (Bcl2l11), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence IDA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence IDA]	The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IMP]; The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2260] [evidence IGI]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; Creation of the central hole of a tube in an anatomical structure through which gases and/or liquids flow [goid 35148] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IGI]; The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals [goid 43583] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IGI]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IDA]	1500006F24Rik; Bod; Bim	1500006F24Rik; Bod; Bim
Mus musculus	RefSeq	ILMN_243250	ILMN_243250	1700073E17RIK	NM_001001987.1	NM_001001987.1		381827	50233841	NM_001001987.1	1700073E17Rik	NP_001001987.1	ILMN_2790902	000650102	S	873	CAAGAAAGCAAGTAGCTTCCCGTGGCTTCAAATGACCTTCCCACAAGGTG	6	+	145349184-145349233	6qG3	Mus musculus RIKEN cDNA 1700073E17 gene (1700073E17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_199406	ILMN_199406	OLFR1248	NM_146791.1	NM_146791.1		258787	22129266	NM_146791.1	Olfr1248	NP_667002.1	ILMN_1242432	006580632	S	550	GGACTTGCATGTACTGACACTTACTTCCTTGGACTCACTGTAGTTAGCAG	2	-	89457748-89457797	2qE1	Mus musculus olfactory receptor 1248 (Olfr1248), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-10	MOR231-10
Mus musculus	RefSeq	ILMN_199406	ILMN_199406	OLFR1248	NM_146791.1	NM_146791.1		258787	22129266	NM_146791.1	Olfr1248	NP_667002.1	ILMN_2748733	002370347	S	576	CCTTGGACTCACTGTAGTTAGCAGTTATGGAGCAATGTCTATAGTGGCCT	2	-	89457722-89457771	2qE1	Mus musculus olfactory receptor 1248 (Olfr1248), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR231-10	MOR231-10
Mus musculus	RefSeq	ILMN_212910	ILMN_212910	DCK	NM_007832.4	NM_007832.4		13178	124286803	NM_007832.4	Dck	NP_031858.1	ILMN_1227664	002190671	S	2282	TAGCTTTGTATGAGGTGAGACACTGAGAAGCCTAGGCGGGCTGTTCAGCC	5	+	89211527-89211576	5qE1	Mus musculus deoxycytidine kinase (Dck), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: NTP + deoxycytidine = NDP + CMP [goid 4137] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210263	ILMN_210263	SETD8	NM_030241.2	NM_030241.2		67956	45580701	NM_030241.2	Setd8	NP_084517.2	ILMN_3001076	001690114	S	2253	TGTCAGCTGTCAGTCTAGCACCCCGGAGCATCAGGCACCAGACGTGCTTG	5	+	124911831-124911880	5qF	Mus musculus SET domain containing (lysine methyltransferase) 8 (Setd8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	AW536475; 2410195B05Rik; AA617402; MGC117832	AW536475; 2410195B05Rik; AA617402; MGC117832
Mus musculus	RefSeq	ILMN_210263	ILMN_210263	SETD8	NM_030241.2	NM_030241.2		67956	45580701	NM_030241.2	Setd8	NP_084517.2	ILMN_1247407	002710170	S	49	AGATTCCAGGCGGTGACAGAGCCCGGCCATGGCTAGAGGCAGGAAGATGT	5	+	124889987-124890014:124890015-124890024:124895978-124895989	5qF	Mus musculus SET domain containing (lysine methyltransferase) 8 (Setd8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	AW536475; 2410195B05Rik; AA617402; MGC117832	AW536475; 2410195B05Rik; AA617402; MGC117832
Mus musculus	RefSeq	ILMN_210263	ILMN_210263	SETD8	NM_030241.2	NM_030241.2		67956	45580701	NM_030241.2	Setd8	NP_084517.2	ILMN_2658208	006840082	S	2469	CCCCTACACCCCCATCTCCCAGGCTCATGATGGTGCTACCTACGAAAGTC	5	+	124912047-124912096	5qF	Mus musculus SET domain containing (lysine methyltransferase) 8 (Setd8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	AW536475; 2410195B05Rik; AA617402; MGC117832	AW536475; 2410195B05Rik; AA617402; MGC117832
Mus musculus	RefSeq	ILMN_210263	ILMN_210263	SETD8	NM_030241.2	NM_030241.2		67956	45580701	NM_030241.2	Setd8	NP_084517.2	ILMN_2603825	006020725	S	1658	ATATTTTTTAGCAAAAGTTTCACAGTAAGCTAGTCTTCCCCTCTGCTTTC	5	+	124911236-124911285	5qF	Mus musculus SET domain containing (lysine methyltransferase) 8 (Setd8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	AW536475; 2410195B05Rik; AA617402; MGC117832	AW536475; 2410195B05Rik; AA617402; MGC117832
Mus musculus	RefSeq	ILMN_198912	ILMN_252463	2410018E23RIK	XM_912668.3	XM_912668.3		637079	149258832	XM_912668.3	2410018E23Rik	XP_917761.3	ILMN_1255098	005050747	S	3625	GTCTCTCGATGGGCCTCAGCATCCCAGCAGAACACCCTTCTTAGCCAGCA				8qB3.3	PREDICTED: Mus musculus RIKEN cDNA 2410018E23 gene (2410018E23Rik), mRNA.					
Mus musculus	Riken	ILMN_204150	ILMN_204150	C730018L13RIK	ri|C730018L13|PX00086J24|AK050126|1648					AK050126	C730018L13Rik		ILMN_1213784	001770139	S	1514	CCCAGAGTGGGGTACCTGCTTCACAAAGGATAAGGGGAGGGTGGAATGGG										
Mus musculus	RefSeq	ILMN_189615	ILMN_231260	5730557B15RIK	NM_026153.2	NM_026153.2		67434	142361300	NM_026153.2	5730557B15Rik	NP_080429.1	ILMN_1217319	006480593	S	1496	TACACTGCATTAATTACTGTACATAATCTAGGGATGGATTAACCACACAA	15	-	31253782-31253831	15qB2	Mus musculus RIKEN cDNA 5730557B15 gene (5730557B15Rik), transcript variant 1, mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	0610012A05Rik	0610012A05Rik
Mus musculus	RefSeq	ILMN_222514	ILMN_222514	PIGZ	NM_172822.2	NM_172822.2		239827	142383310	NM_172822.2	Pigz	NP_766410.1	ILMN_2750725	002120079	S	1969	CAAAGATCTGACCAGTCATGGTCTCAATAGCATGGGCACCTGTCTGCTTC	16	+	31946020-31946069	16qB2	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class Z (Pigz), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	F630022B06Rik	F630022B06Rik
Mus musculus	RefSeq	ILMN_221501	ILMN_221501	RSPO3	NM_028351.2	NM_028351.2		72780	84370245	NM_028351.2	Rspo3	NP_082627.2	ILMN_3162785	005390121	I	1993	GCTTTCCAGAACCGTGAGGGGTTTTGGTCACCTGGAACAGGGCTCCAATC	10	-	29219412-29219461	10qA4	Mus musculus R-spondin 3 homolog (Xenopus laevis) (Rspo3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	Thsd2; Cristin1; 2810459H04Rik; MGC118442; AW742308	Thsd2; Cristin1; 2810459H04Rik; MGC118442; AW742308
Mus musculus	Riken	ILMN_204762	ILMN_204762	B930044N05RIK	ri|B930044N05|PX00164K17|AK047278|1224					AK047278	B930044N05Rik		ILMN_1258814	003420392	S	572	ATTTGGTTGTTGTTTGTTTGAGATAGTCTTCTGTGGCCCAGGTTGGCCTC										
Mus musculus	RefSeq	ILMN_213141	ILMN_241901	AK2	NM_001033966.3	NM_001033966.3		11637	146198711	NM_001033966.3	Ak2	NP_001029138.1	ILMN_2641360	002070279	S	445	CGATTCAGTCATTGAGTTCAGCATCCAAGACTCGCTGCTGATCCGGAGGA				4qD2.2	Mus musculus adenylate kinase 2 (Ak2), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate [goid 19201] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor) [goid 16776] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]	D4Ertd220e; Ak-2	D4Ertd220e; Ak-2
Mus musculus	RefSeq	ILMN_244602	ILMN_244602	FUT10	NM_001012517.2	NM_001012517.2		171167	83921582	NM_001012517.2	Fut10	NP_001012535.1	ILMN_3081776	002000228	A	1496	CTCGTTTGAGTGTATGGTGTGCCGCAGGGTGTGGGCAAACAGTAGGCTGC	8	+	32702309-32702358	8qA3	Mus musculus fucosyltransferase 10 (Fut10), transcript variant A, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IEA]	MGC40819	MGC40819
Mus musculus	RefSeq	ILMN_244602	ILMN_244602	FUT10	NM_001012517.2	NM_001012517.2		171167	83921582	NM_001012517.2	Fut10	NP_001012535.1	ILMN_3011294	005270164	I	2851	GAGGGTTGAAAGCAGCGCATTCTTCAGGAGCAGCTGGGTCACCTTCCTGG	8	+	32727133-32727182	8qA3	Mus musculus fucosyltransferase 10 (Fut10), transcript variant A, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IEA]	MGC40819	MGC40819
Mus musculus	RefSeq	ILMN_212647	ILMN_256220	PIGYL	NM_001082532.1	NM_001082532.1		66268	126722948	NM_001082532.1	Pigyl	NP_001076001.1	ILMN_1255634	007200673	S	313	CTTTTAAGAAGGGAGGAAGATGATCCGGTCCCTGCCCACCATGACCGTCC	9	+	21962420-21962438:21962439-21962469	9qA3	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class Y-like (Pigyl), mRNA.				Pigy; 1810008A14Rik; PIG-Y	Pigy; 1810008A14Rik; PIG-Y
Mus musculus	Riken	ILMN_206012	ILMN_206012	B130064M22RIK	ri|B130064M22|PX00158J23|AK045313|3005					AK045313	B130064M22Rik		ILMN_1239310	004070192	S	2654	GCCAGCAGAATGTGGGGACTGCGGCTTCCGATCCTTGGACATTAGCTAGC										
Mus musculus	RefSeq	ILMN_197754	ILMN_197754	LOC381501	XM_355458.1	XM_355458.1			38077816	XM_355458.1	LOC381501		ILMN_2529252	002570181	S	121	GAGGACATGACACTTACAAGATGGACAGGCATGATAATTGGACCTCCACG										
Mus musculus	RefSeq	ILMN_220445	ILMN_220445	HPS1	NM_019424.2	NM_019424.2		192236	126722683	NM_019424.2	Hps1	NP_062297.1	ILMN_2722129	001510019	S	2496	GGGAGAGCAGAAGAACGTCTTAGTGCTCAGGCTGTCTGAAGCCACCCACT	19	-	42829894-42829943	19qC3	Mus musculus Hermansky-Pudlak syndrome 1 homolog (human) (Hps1), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISO]	The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]		ep; Hps; 6030422N11Rik; BB405864; MGC102063	ep; Hps; 6030422N11Rik; BB405864; MGC102063
Mus musculus	RefSeq	ILMN_218923	ILMN_218923	HES3	NM_008237.4	NM_008237.4		15207	146149291	NM_008237.4	Hes3	NP_032263.2	ILMN_2701992	002900427	S	484	GGAGAAGGCCGATATCCTGGAGCTGAGTGTTAAGTACATGAGAAGCCTCC				4qE2	Mus musculus hairy and enhancer of split 3 (Drosophila) (Hes3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structure of the hindbrain is generated and organized. Morphogenesis pertains to the creation of form. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions [goid 21575] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process by which the anatomical structure of the midbrain-hindbrain boundary is generated and organized. Morphogenesis pertains to the creation of form. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate [goid 21555] [evidence IGI]; The process whose specific outcome is the progression of the neural tube over time, from its formation to the mature structure. The mature structure of the neural tube exists when the tube has been segmented into the forebrain, midbrain, hindbrain and spinal cord regions. In addition neural crest has budded away from the epithelium [goid 21915] [evidence IGI]; The process whose specific outcome is the progression of the oculomotor nerve over time, from its formation to the mature structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle [goid 21557] [evidence IGI]; The process whose specific outcome is the progression of the trochlear nerve over time, from its formation to the mature structure. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle [goid 21558] [evidence IGI]; The process controlling the timing and/or rate at which a relatively unspecialized cell acquires features of a neuron [goid 60164] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	HES-3; MGC144657	HES-3; MGC144657
Mus musculus	RefSeq	ILMN_201695	ILMN_217426	SEC62	NM_027016.2	NM_027016.2		69276	84370366	NM_027016.2	Sec62	NP_081292.1	ILMN_2543851	004810632	S	333	GAAGACCACGGAGGCCGCCCCCAGCCCAGAGCCCGCGGCGGGTTACATAA	3	+	30692130-30692179	3qA3	Mus musculus SEC62 homolog (S. cerevisiae) (Sec62), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	HTP1; SEC62; AI844545; 3100002M17Rik; AW545092; Dtrp1	HTP1; SEC62; AI844545; 3100002M17Rik; AW545092; Dtrp1
Mus musculus	RefSeq	ILMN_217426	ILMN_217426	SEC62	NM_027016.2	NM_027016.2		69276	84370366	NM_027016.2	Sec62	NP_081292.1	ILMN_2683080	007400598	S	2635	TTAAAGTAGTAGCTGTTTGTACGCCTTAATGTTCATTGATTTATTTTAAA	3	+	30718854-30718903	3qA3	Mus musculus SEC62 homolog (S. cerevisiae) (Sec62), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	HTP1; SEC62; AI844545; 3100002M17Rik; AW545092; Dtrp1	HTP1; SEC62; AI844545; 3100002M17Rik; AW545092; Dtrp1
Mus musculus	RefSeq	ILMN_206679	ILMN_256119	UBFD1	NM_138589.2	NM_138589.2		28018	77917601	NM_138589.2	Ubfd1	NP_613055.2	ILMN_1219450	002970670	S	4495	GAAGTAGACAGGAGCCTCTAGTGTGCAAATCAGCTGGTGGCTTAGCTGCC	7	+	129225377-129225426	7qF3	Mus musculus ubiquitin family domain containing 1 (Ubfd1), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		D7Wsu105e; Ubph; AI467302; D7Wsu128e	D7Wsu105e; Ubph; AI467302; D7Wsu128e
Mus musculus	RefSeq	ILMN_222146	ILMN_256119	UBFD1	NM_138589.2	NM_138589.2		28018	77917601	NM_138589.2	Ubfd1	NP_613055.2	ILMN_2777104	003800437	S	1331	GGTGACTGAAGCCAGAGGTGATGTACTTTCACCATTAGCTTAATTTGAAC	7	+	129222213-129222262	7qF3	Mus musculus ubiquitin family domain containing 1 (Ubfd1), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		D7Wsu105e; Ubph; AI467302; D7Wsu128e	D7Wsu105e; Ubph; AI467302; D7Wsu128e
Mus musculus	RefSeq	ILMN_223089	ILMN_223089	LGTN	NM_010709.2	NM_010709.2		16865	142350503	NM_010709.2	Lgtn	NP_034839.1	ILMN_1259832	006960138	S	1328	CCGAAAGATCATCACGGACTATGCCAAGAGAAACAGACTGGTGGATGCAG	1	+	133061727-133061776	1qE4	Mus musculus ligatin (Lgtn), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	D1Ertd5e	D1Ertd5e
Mus musculus	RefSeq	ILMN_196580	ILMN_196580	GSTM2	NM_008183.2	NM_008183.2		14863	31982315	NM_008183.2	Gstm2	NP_032209.1	ILMN_1251449	002690025	S	1001	CTGTGTGCTGCCTTGGTCCTCAGAGTAAGCAGCTAAGCCCCATTTGGTTC				3qF2.3	Mus musculus glutathione S-transferase, mu 2 (Gstm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gstb2; Gstb-2	Gstb2; Gstb-2
Mus musculus	RefSeq	ILMN_196580	ILMN_196580	GSTM2	NM_008183.2	NM_008183.2		14863	31982315	NM_008183.2	Gstm2	NP_032209.1	ILMN_2862470	000730025	S	736	CCAGACCTGGGGGAATACTCATGAGTGCTCTGCTGGCCCTAGCTCTTACC	3	-	108110022-108110071	3qF2.3	Mus musculus glutathione S-transferase, mu 2 (Gstm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Gstb2; Gstb-2	Gstb2; Gstb-2
Mus musculus	RefSeq	ILMN_216269	ILMN_216269	ETV6	NM_007961.3	NM_007961.3		14011	84370336	NM_007961.3	Etv6	NP_031987.3	ILMN_2669199	007200301	S	1791	GACCGCAGGAGGCGTGATGGAAGCAGGCGAGCTAGGGGTGGCTGTAAAGG	6	+	134216426-134216475	6qG1	Mus musculus ets variant gene 6 (TEL oncogene) (Etv6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AW123102; AW557856; Tel	AW123102; AW557856; Tel
Mus musculus	RefSeq	ILMN_200388	ILMN_200388	LOC386395	XM_359201.1	XM_359201.1			38081499	XM_359201.1	LOC386395		ILMN_1234417	004230364	S	61	GGTGGTAGTGGTGATGGGTTATCAGCCTTATTTATAATTGCCAGAAGCTG										
Mus musculus	RefSeq	ILMN_200638	ILMN_200638	LOC384447	XM_357651.1	XM_357651.1			38084595	XM_357651.1	LOC384447		ILMN_1252276	001710653	S	108	CTCAATGCCTTATTTCGTAAGCATCCTTATTGAACTACAGCTCCGTGAGC										
Mus musculus	RefSeq	ILMN_258552	ILMN_258552	AI747699	NM_001013770.2	NM_001013770.2		381236	110625661	NM_001013770.2	AI747699	NP_001013792.2	ILMN_2793739	002030487	S	2122	CGAACCCAGGCTCAAGAAGGACAGTCAATCTTGTTGCTCAGATTCCACAA				19qC1	Mus musculus expressed sequence AI747699 (AI747699), mRNA.			Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]		
Mus musculus	MEEBO	ILMN_213451	ILMN_213451	2310001H17RIK	scl076432.2_18				51712685	XM_489155	2310001H17Rik		ILMN_2637165	003460020	S	769	GCCCTGGCTTAACGTTCCAGACACTGCTGCCAATACTTGCGGCTGTTAGT										
Mus musculus	RefSeq	ILMN_224295	ILMN_230857	MAPK10	NM_009158.2	NM_009158.2		26414	125858510	NM_009158.2	Mapk10	NP_033184.2	ILMN_2778112	003710626	S	1764	AACTCAGAAGAGAAGACTAAGAATGGCGTAGTCAAAGGCCAGCCCTCGCC	5	-	103355095-103355144	5qE5	Mus musculus mitogen-activated protein kinase 10 (Mapk10), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [evidence IDA]	C230008H04Rik; SAPK(beta); JNK3; p54bSAPK; JNK3B2; Serk2; JNK3B1; p493F12	C230008H04Rik; SAPK(beta); JNK3; p54bSAPK; JNK3B2; Serk2; JNK3B1; p493F12
Mus musculus	RefSeq	ILMN_218250	ILMN_230857	MAPK10	NM_009158.2	NM_009158.2		26414	125858510	NM_009158.2	Mapk10	NP_033184.2	ILMN_2693577	004610411	S	6499	TAGACTCTTCACAGTTGGAACCAAGTCAACGTATTGTAATTTGTATGTCT	5	-	103337621-103337670	5qE5	Mus musculus mitogen-activated protein kinase 10 (Mapk10), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [evidence IDA]	C230008H04Rik; SAPK(beta); JNK3; p54bSAPK; JNK3B2; Serk2; JNK3B1; p493F12	C230008H04Rik; SAPK(beta); JNK3; p54bSAPK; JNK3B2; Serk2; JNK3B1; p493F12
Mus musculus	RefSeq	ILMN_230857	ILMN_230857	MAPK10	NM_009158.2	NM_009158.2		26414	125858510	NM_009158.2	Mapk10	NP_033184.2	ILMN_3155994	003840288	A	6605	CCCAGACTCTGTCGGACTCTCCTGTCAACAATGCCCTTTGTTTGTGCTGC	5	-	103337515-103337564	5qE5	Mus musculus mitogen-activated protein kinase 10 (Mapk10), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [evidence IDA]	C230008H04Rik; SAPK(beta); JNK3; p54bSAPK; JNK3B2; Serk2; JNK3B1; p493F12	C230008H04Rik; SAPK(beta); JNK3; p54bSAPK; JNK3B2; Serk2; JNK3B1; p493F12
Mus musculus	Riken	ILMN_205833	ILMN_205833	A630046I07RIK	ri|A630046I07|PX00145K06|AK041911|1568					AK041911	A630046I07Rik		ILMN_1212669	004390546	S	1350	GTGTGGAGGGCTGATTGGAATGATGTCAAGGAACTGGTACTGTGTGGCTC										
Mus musculus	RefSeq	ILMN_199340	ILMN_199340	LOC385297	XM_358176.1	XM_358176.1			38096986	XM_358176.1	LOC385297		ILMN_1254098	007570427	S	559	AGTGCTAAACAACTGAGCAAAGCTGCACAACAACGGGACCCAGAGGCTGG										
Mus musculus	RefSeq	ILMN_222537	ILMN_311652	LOC100042604	XM_001479550.1	XM_001479550.1		100042604	149249304	XM_001479550.1	LOC100042604	XP_001479600.1	ILMN_1257673	004280360	S	731	GTAGGAAAAATTCTTTGAAGGAAGAAGGGGAGTAAACTGTTCCCTTCTCC	2	-	39982679-39982728	2qB	PREDICTED: Mus musculus similar to vacuolar H+ ATPase G1 (LOC100042604), mRNA.					
Mus musculus	MEEBO	ILMN_211443	ILMN_211443	A730016F12RIK	scl0001143.1_15	NM_175079.1			28416906	NM_175079.1	A730016F12Rik		ILMN_1253094	004780731	S	251	GGACTGTGTCAAGGTGGTGAGCGCCAGAATGAGCTAGCCCTCTGTCCATC										
Mus musculus	RefSeq	ILMN_219367	ILMN_219367	SLC15A3	NM_023044.1	NM_023044.1		65221	12746419	NM_023044.1	Slc15a3	NP_075531.1	ILMN_2987709	003290427	S	2129	CACAGCCGTCCTGTTTCTCTGGATTGCTGGTCGCTATGAGAGGACTCGCC	19	+	10932189-10932238	19qA	Mus musculus solute carrier family 15, member 3 (Slc15a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Ci1; cI-1	Ci1; cI-1
Mus musculus	RefSeq	ILMN_200795	ILMN_260246	ZFP568	NM_001033355.2	NM_001033355.2		243905	141803302	NM_001033355.2	Zfp568	NP_001028527.1	ILMN_2540034	001580050	S	225	GCCAGAAGGCGGGACTCAAGCCTGTTCGGAGCTGCAACCAAAAACCTGGT	7	+	30769200-30769247:30770279-30770280	7qB1	Mus musculus zinc finger protein 568 (Zfp568), mRNA. XM_899378 XM_899382 XM_899389 XM_899395	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C80731; Gm1691	C80731; Gm1691
Mus musculus	RefSeq	ILMN_198565	ILMN_260246	ZFP568	NM_001033355.2	NM_001033355.2		243905	141803302	NM_001033355.2	Zfp568	NP_001028527.1	ILMN_2532139	004290343	S	2143	CCGTCGTGGTTCAGAACTTGCCCGGCATCAGAGAGCCCATTCTGGCGATA	7	+	30808270-30808319	7qB1	Mus musculus zinc finger protein 568 (Zfp568), mRNA. XM_899378 XM_899382 XM_899389 XM_899395	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C80731; Gm1691	C80731; Gm1691
Mus musculus	RefSeq	ILMN_251122	ILMN_251122	H2-K1	NM_001001892.1	NM_001001892.1		14972	49615100	NM_001001892.1	H2-K1	NP_001001892.1	ILMN_2795520	006280026	S	842	ATGTGCACCATAAGGGGCTGCCTGAGCCTCTCACCCTGAGATGGAAGCTT	17	-	33607606-33607611:33607739-33607782	17qB1	Mus musculus histocompatibility 2, K1, K region (H2-K1), mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 42590] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IDA]	Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IDA]	MHC I; MGC7052; H2-K; H-2K; H-2K(d)	MHC I; MGC7052; H2-K; H-2K; H-2K(d)
Mus musculus	MEEBO	ILMN_189339	ILMN_189339	A930009M04RIK	scl0320806.21_23				34328424	NM_177266	A930009M04Rik		ILMN_2734855	006450189	S	2988	AAACCATTGCAAGATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCT										
Mus musculus	MEEBO	ILMN_189339	ILMN_189339	A930009M04RIK	scl0320806.21_23				34328424	NM_177266	A930009M04Rik		ILMN_2734856	001240468	S	2989	AACCATTGCAAGATGACAGTATCCACACAGGGCAGCCCTCTGGAGTGCTA										
Mus musculus	RefSeq	ILMN_212428	ILMN_212428	ELF2	NM_023502.1	NM_023502.1		69257	12963704	NM_023502.1	Elf2	NP_075991.1	ILMN_2748337	001780050	S	452	CAGCAGTAATGCTCACTGTACGGATAAGACCATTGAAGCTGCTGAAGCCC	3	-	51070723-51070772	3qC	Mus musculus E74-like factor 2 (Elf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2610036A20Rik; NERF; NERF-1A; NERF-2; EU32; NERF-1B; BB183398; AW111824; MGC102660; A230104O07Rik	2610036A20Rik; NERF; NERF-1A; NERF-2; EU32; NERF-1B; BB183398; AW111824; MGC102660; A230104O07Rik
Mus musculus	RefSeq	ILMN_212428	ILMN_212428	ELF2	NM_023502.1	NM_023502.1		69257	12963704	NM_023502.1	Elf2	NP_075991.1	ILMN_1255311	003460324	S	2586	GGCCTTAGACTAATTTTCGGTTTCCTTTCTTGAAATAAGCTAATGGCTTG	3	-	51059627-51059676	3qC	Mus musculus E74-like factor 2 (Elf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2610036A20Rik; NERF; NERF-1A; NERF-2; EU32; NERF-1B; BB183398; AW111824; MGC102660; A230104O07Rik	2610036A20Rik; NERF; NERF-1A; NERF-2; EU32; NERF-1B; BB183398; AW111824; MGC102660; A230104O07Rik
Mus musculus	RefSeq	ILMN_212428	ILMN_212428	ELF2	NM_023502.1	NM_023502.1		69257	12963704	NM_023502.1	Elf2	NP_075991.1	ILMN_1251296	002000497	S	743	CCCAGCAGTCACCAGTTTCCAATGGGTCTCCTGAGTTAGGAATCAAGAAG	3	-	51064939-51064988	3qC	Mus musculus E74-like factor 2 (Elf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2610036A20Rik; NERF; NERF-1A; NERF-2; EU32; NERF-1B; BB183398; AW111824; MGC102660; A230104O07Rik	2610036A20Rik; NERF; NERF-1A; NERF-2; EU32; NERF-1B; BB183398; AW111824; MGC102660; A230104O07Rik
Mus musculus	RefSeq	ILMN_212428	ILMN_212428	ELF2	NM_023502.1	NM_023502.1		69257	12963704	NM_023502.1	Elf2	NP_075991.1	ILMN_2626318	004050687	S	156	TCCGTTGCTTCACAGCATTTGAGACTTCCTCAGGGAACGCACGATGGCAT	3	-	51127208-51127215:51127216-51127257	3qC	Mus musculus E74-like factor 2 (Elf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2610036A20Rik; NERF; NERF-1A; NERF-2; EU32; NERF-1B; BB183398; AW111824; MGC102660; A230104O07Rik	2610036A20Rik; NERF; NERF-1A; NERF-2; EU32; NERF-1B; BB183398; AW111824; MGC102660; A230104O07Rik
Mus musculus	RefSeq	ILMN_212428	ILMN_212428	ELF2	NM_023502.1	NM_023502.1		69257	12963704	NM_023502.1	Elf2	NP_075991.1	ILMN_2748336	000130386	S	456	CAGTAATGCTCACTGTACGGATAAGACCATTGAAGCTGCTGAAGCCCTGC	3	-	51070719-51070768	3qC	Mus musculus E74-like factor 2 (Elf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2610036A20Rik; NERF; NERF-1A; NERF-2; EU32; NERF-1B; BB183398; AW111824; MGC102660; A230104O07Rik	2610036A20Rik; NERF; NERF-1A; NERF-2; EU32; NERF-1B; BB183398; AW111824; MGC102660; A230104O07Rik
Mus musculus	Riken	ILMN_202858	ILMN_202858	4933407L23RIK	ri|4933407L23|PX00020A08|AK030165|2835					AK030165	4933407L23Rik		ILMN_1253798	004070747	S	2537	AGAGAGACAAGGGGAGAGGAAGAGAGCTGTCACCTGAACTCAACCTGGGC										
Mus musculus	RefSeq	ILMN_238594	ILMN_238594	OLFR728	NM_001011809.1	NM_001011809.1		258039	58801383	NM_001011809.1	Olfr728	NP_001011809.1	ILMN_3160356	003840204	S	562	GCGTGCATGGATACGTACAGAATGGAAATTTTGACCTTGGCTAACAGTGG	14	-	50759701-50759750	14qC1	Mus musculus olfactory receptor 728 (Olfr728), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR246-1P	MOR246-1P
Mus musculus	Riken	ILMN_205554	ILMN_205554	EGLN3	ri|9030414K11|PX00025A06|AK033509|2512					AK033509	Egln3		ILMN_1231847	003190451	S	2256	TGAAAAAAGTGCCAGGGAGAAGCAGGCAGGCTCTGTAGATCCCGGGGTGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213586	ILMN_213586	DHRS7	NM_025522.3	NM_025522.3		66375	146135024	NM_025522.3	Dhrs7	NP_079798.1	ILMN_2747820	003440639	S	432	ACGGTGGAAGAAGCCAGCGTTCCTTAGTTCTAGAAACCAACTTGGATGTC				12qC3	Mus musculus dehydrogenase/reductase (SDR family) member 7 (Dhrs7), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	retDSR4; 5730564L20Rik; AW061210; retSDR4; 2310016E22Rik	retDSR4; 5730564L20Rik; AW061210; retSDR4; 2310016E22Rik
Mus musculus	RefSeq	ILMN_213586	ILMN_213586	DHRS7	NM_025522.3	NM_025522.3		66375	146135024	NM_025522.3	Dhrs7	NP_079798.1	ILMN_1213456	002320521	S	915	AGTATATGCCAACCTGGGCCGCATGGCTAAACTGCAAGTTGGGGAAGGAA				12qC3	Mus musculus dehydrogenase/reductase (SDR family) member 7 (Dhrs7), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	retDSR4; 5730564L20Rik; AW061210; retSDR4; 2310016E22Rik	retDSR4; 5730564L20Rik; AW061210; retSDR4; 2310016E22Rik
Mus musculus	RefSeq	ILMN_253393	ILMN_253393	SNX25	NM_207213.1	NM_207213.1		102141	75832038	NM_207213.1	Snx25	NP_997096.1	ILMN_2851429	007570711	S	2921	TCTAGCTGTACGTGAAGTGAGCAGAGTCAGAGGGAGGAGGACAGATGCTG	8	-	47118930-47118979	8qB1.1	Mus musculus sorting nexin 25 (Snx25), mRNA.				Gm1699; SBBI31; Gm173; AI661919	Gm1699; SBBI31; Gm173; AI661919
Mus musculus	RefSeq	ILMN_196525	ILMN_253393	SNX25	NM_207213.1	NM_207213.1		102141	75832038	NM_207213.1	Snx25	NP_997096.1	ILMN_2648089	001070544	S	2873	CACAGAGGGCCTGACAAGAACCATATGATTTTTATTTCCGAGCCTCCCTC	8	-	47118978-47119027	8qB1.1	Mus musculus sorting nexin 25 (Snx25), mRNA.				Gm1699; SBBI31; Gm173; AI661919	Gm1699; SBBI31; Gm173; AI661919
Mus musculus	RefSeq	ILMN_196525	ILMN_253393	SNX25	NM_207213.1	NM_207213.1		102141	75832038	NM_207213.1	Snx25	NP_997096.1	ILMN_2690107	003310768	S	810	CGCGCCTTCCTACGAGGACTTTATCAAGCTCATCAACAGCAACTCTGATG	8	-	47188890-47188939	8qB1.1	Mus musculus sorting nexin 25 (Snx25), mRNA.				Gm1699; SBBI31; Gm173; AI661919	Gm1699; SBBI31; Gm173; AI661919
Mus musculus	Riken	ILMN_205284	ILMN_205284	4733401O04RIK	ri|4733401O04|PX00313E22|AK029166|1145					AK029166	4733401O04Rik		ILMN_1241389	003130091	S	955	GTCGTTTTTCCTGGGGGAAGGACACTTGGACACTCAACCTTCGTCGGCGC										
Mus musculus	RefSeq	ILMN_200038	ILMN_200038	LOC383165	XM_356904.1	XM_356904.1			38079971	XM_356904.1	LOC383165		ILMN_1231446	000240687	S	525	GCCCCGGAAATCGGGTTTTTCTCCCTTTTGGAGATATTGCCATGCTAATG										
Mus musculus	RefSeq	ILMN_218144	ILMN_218144	HSD17B3	NM_008291.3	NM_008291.3		15487	153792572	NM_008291.3	Hsd17b3	NP_032317.2	ILMN_2774131	003940040	S	355	CTGTGTGAAGATTGTACAAGCAGATTTTACCAGAGAAGACATCTATGACC				13qB3	Mus musculus hydroxysteroid (17-beta) dehydrogenase 3 (Hsd17b3), mRNA.		The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NADP+ + testosterone = NADPH + H+ + androst-4-ene-3,17-dione [goid 47045] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218144	ILMN_218144	HSD17B3	NM_008291.3	NM_008291.3		15487	153792572	NM_008291.3	Hsd17b3	NP_032317.2	ILMN_1234235	006550762	S	613	TTCAGGCGCAGCCCTTCGTCCCTGGCCTCTTTACAGCCTGTACTCAGCTT				13qB3	Mus musculus hydroxysteroid (17-beta) dehydrogenase 3 (Hsd17b3), mRNA.		The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NADP+ + testosterone = NADPH + H+ + androst-4-ene-3,17-dione [goid 47045] [evidence IEA]		
Mus musculus	RefSeq	ILMN_207161	ILMN_311431	LOC628101	XR_035428.1	XR_035428.1		628101	149267394	XR_035428.1	LOC628101		ILMN_1213707	005870463	S	1144	GGCCCTGGCCTGAAGCATTGGTGTTGGTTACACGGCCTTTACTTCCTTGA	16	+	36876316-36876365	16qB3	PREDICTED: Mus musculus hypothetical LOC628101 (LOC628101), misc RNA.					
Mus musculus	RefSeq	ILMN_187955	ILMN_311431	LOC628101	XR_035428.1	XR_035428.1		628101	149267394	XR_035428.1	LOC628101		ILMN_2448573	000020044	S	2243	CCCCCGCAAGTCATAATACATCCTTTTGCCACTTAATATTATACAGCAGC	16	+	36877415-36877464	16qB3	PREDICTED: Mus musculus hypothetical LOC628101 (LOC628101), misc RNA.					
Mus musculus	RefSeq	ILMN_190464	ILMN_238157	DIDO1	NM_011805.2	NM_011805.2		23856	51556455	NM_011805.2	Dido1	NP_035935.2	ILMN_1222756	004060711	S	63	CTAGGACGGTAGTCTCGCTGGTCTCTGCTCTATATCCGTGGTAGCTCTGG	2	-	180436693-180436742	2qH4	Mus musculus death inducer-obliterator 1 (Dido1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Datf1; D130048F08Rik; C530043I07; Dido3; Dido2; mKIAA0333; 6720461J16Rik; DIO-1	Datf1; D130048F08Rik; C530043I07; Dido3; Dido2; mKIAA0333; 6720461J16Rik; DIO-1
Mus musculus	RefSeq	ILMN_238157	ILMN_238157	DIDO1	NM_011805.2	NM_011805.2		23856	51556455	NM_011805.2	Dido1	NP_035935.2	ILMN_3087518	001110139	A	1855	GTGAAGCCAGAGAAGCCAGAGAAGCCCACTGCACTCTCGCCCACCCTATT	2	-	180418521-180418570	2qH4	Mus musculus death inducer-obliterator 1 (Dido1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Datf1; D130048F08Rik; C530043I07; Dido3; Dido2; mKIAA0333; 6720461J16Rik; DIO-1	Datf1; D130048F08Rik; C530043I07; Dido3; Dido2; mKIAA0333; 6720461J16Rik; DIO-1
Mus musculus	RefSeq	ILMN_238157	ILMN_238157	DIDO1	NM_011805.2	NM_011805.2		23856	51556455	NM_011805.2	Dido1	NP_035935.2	ILMN_3016099	005270110	I	4489	AGCATGCTGCTCTGCACAGGAAACCACTCCTCCACATGCAGGTGATTCGA	2	-	180415887-180415936	2qH4	Mus musculus death inducer-obliterator 1 (Dido1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Datf1; D130048F08Rik; C530043I07; Dido3; Dido2; mKIAA0333; 6720461J16Rik; DIO-1	Datf1; D130048F08Rik; C530043I07; Dido3; Dido2; mKIAA0333; 6720461J16Rik; DIO-1
Mus musculus	Riken	ILMN_203747	ILMN_203747	PBX1	ri|9930036F21|PX00120G24|AK037006|3420					AK037006	Pbx1		ILMN_2559669	006860731	S	3258	GTTCAGGATCTGGGCTGCCTGTGTATCTTCATGCCTTTGATGCCCTGGGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IMP]; The process whose specific outcome is the progression of the urogenital system over time, from its formation to the mature structure [goid 1655] [evidence IMP]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IMP]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IGI]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IPI]		
Mus musculus	Riken	ILMN_201911	ILMN_201911	4933439F18RIK	ri|4933439F18|PX00021B16|AK017120|1717					AK017120	4933439F18Rik		ILMN_2545559	003850201	S	1560	GTCCCTACACTGGGCTGAATGCAACCTGTTGGTGTTCCGAAAGCCCCCAC										
Mus musculus	RefSeq	ILMN_188723	ILMN_188723	ZCCHC14	NM_080855.1	NM_080855.1		142682	18252797	NM_080855.1	Zcchc14	NP_543131.1	ILMN_2476705	002120546	S	3020	GTGGTTTCCTTAGGTCTCCATGGCGCCACAGCAACTTGACTTCAGTTCTC	8	-	124126009-124126058	8qE1	Mus musculus zinc finger, CCHC domain containing 14 (Zcchc14), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	BDG29; AA792890; KIAA0579	BDG29; AA792890; KIAA0579
Mus musculus	RefSeq	ILMN_188723	ILMN_188723	ZCCHC14	NM_080855.1	NM_080855.1		142682	18252797	NM_080855.1	Zcchc14	NP_543131.1	ILMN_1235054	003450730	S	5535	GAGACGGTTGCTCTTGAGCTATGGTTGGGTGTCAGGAAACCAGTGGCATG	8	-	124123494-124123543	8qE1	Mus musculus zinc finger, CCHC domain containing 14 (Zcchc14), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	BDG29; AA792890; KIAA0579	BDG29; AA792890; KIAA0579
Mus musculus	RefSeq	ILMN_188723	ILMN_188723	ZCCHC14	NM_080855.1	NM_080855.1		142682	18252797	NM_080855.1	Zcchc14	NP_543131.1	ILMN_3000035	003060048	S	5462	GAAAGTGTTTTAATGCTGAGAACTCCTCTAACTGCTGCCGGGCAGGCACC	8	-	124123567-124123616	8qE1	Mus musculus zinc finger, CCHC domain containing 14 (Zcchc14), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	BDG29; AA792890; KIAA0579	BDG29; AA792890; KIAA0579
Mus musculus	Riken	ILMN_201832	ILMN_201832	5730408I11RIK	ri|5730408I11|PX00002P17|AK017525|937					AK017525	5730408I11Rik		ILMN_2544931	000630209	S	535	GGTGGGAACTGTGCAAACTGTGCAGCCTTTCTGCAGGCTGAGACCATAGC										
Mus musculus	RefSeq	ILMN_234963	ILMN_234963	EG624866	NM_001037923.1	NM_001037923.1		624866	85702311	NM_001037923.1	EG624866	NP_001033012.1	ILMN_2867789	000940021	S	2103	GACTCACTGCCTCCCAGTCACTCAGCACCACGCTTTATCTTTAGGGTAGC	3	+	65773790-65773839	3qE1	Mus musculus predicted gene, EG624866 (EG624866), mRNA.					
Mus musculus	RefSeq	ILMN_221444	ILMN_316341	LOC626152	XR_032670.1	XR_032670.1		626152	149266974	XR_032670.1	LOC626152		ILMN_1243900	006130433	S	9489	ACATGGTGTGTCTTGATTTGCCCTCTGTGTTAGGAATAATGTCGCTCATC					PREDICTED: Mus musculus similar to epiplakin (LOC626152), misc RNA.					
Mus musculus	RefSeq	ILMN_199574	ILMN_311466	LOC667609	XR_032582.1	XR_032582.1		667609	149248926	XR_032582.1	LOC667609		ILMN_1220382	006420192	S	17	AGCAAACCTGTTTCATTGCAGTGACTGCAGAAGAGCTCTGGAAAGGCGCC	2	-	20157661-20157710	2qA3	PREDICTED: Mus musculus similar to mitochondrial ribosomal protein S5 (LOC667609), misc RNA.					
Mus musculus	RefSeq	ILMN_192620	ILMN_311466	LOC667609	XR_032582.1	XR_032582.1		667609	149248926	XR_032582.1	LOC667609		ILMN_2716014	000670195	S	454	TGACAGCAAAAGAGGGAAGAAAGAAGTCGGTCCGAGTCCTGGTTGCTGTT	2	-	20157224-20157273	2qA3	PREDICTED: Mus musculus similar to mitochondrial ribosomal protein S5 (LOC667609), misc RNA.					
Mus musculus	MEEBO	ILMN_220253	ILMN_220253	BC003331	scl16174.14.1_64	NM_145511.1			21704005	NM_145511.1	BC003331		ILMN_2719794	002350458	S	1472	CTGGCCCAGGTTTCCAAAAGTAAACTGTGCATCTAAATGGAGTTGCATGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191858	ILMN_191858	2810012D02RIK	scl5615.1.1_260						2810012D02Rik		ILMN_1229670	004560630	S	5	CCTTGTCTCTACCATGTTGAACTTGATTCCAGAATTTCAGACCTGACTGG										
Mus musculus	RefSeq	ILMN_220637	ILMN_220637	RKHD1	NM_198615.1	NM_198615.1		237400	38348475	NM_198615.1	Rkhd1	NP_941017.1	ILMN_2724702	001510484	S	1973	CAAGAGGAGGGTAATGGGAGGGTATCCAAGGGGGGTCCCATCGACAGATT	10	-	79843455-79843504	10qC1	Mus musculus ring finger (C3HC4 type) and KH domain containing 1 (Rkhd1), mRNA.				BC059858; MGC69704	BC059858; MGC69704
Mus musculus	Riken	ILMN_201947	ILMN_201947	BNIP2	ri|4833407C03|PX00027L03|AK014659|1466					AK014659	Bnip2		ILMN_1229814	002230592	S	1215	AAGGAACCCCACAGCTTCCCCTCACAGCACCATGTTTACAGAACTGGAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISO]			
Mus musculus	RefSeq	ILMN_221822	ILMN_221822	HOXD12	NM_008274.2	NM_008274.2		15432	121583907	NM_008274.2	Hoxd12	NP_032300.2	ILMN_2951852	004280301	S	2307	CCAATGGCTTTCCTTTAGAGAAGGTCTCCAGGAACTGGACCTCGAAGGGC	2	+	74515552-74515601	2qC3	Mus musculus homeo box D12 (Hoxd12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Hox-4.7; Hox-5.6	Hox-4.7; Hox-5.6
Mus musculus	RefSeq	ILMN_200228	ILMN_200228	LOC386003	XM_359030.1	XM_359030.1			38081007	XM_359030.1	LOC386003		ILMN_1239139	000870600	S	369	GCCGGGCAGACACCTGTCCTCTGGCCCCGAAGTAAAGAAAAAGAGAAATG										
Mus musculus	Riken	ILMN_204268	ILMN_204268	9530078O19RIK	ri|9530078O19|PX00114M06|AK035631|1510					AK035631	9530078O19Rik		ILMN_2563680	003060201	S	1213	GTTCAAGCAAGGGTAGCCTTTTCTACAGAGTGAATTCTAGGCTGCAAGGG										
Mus musculus	RefSeq	ILMN_215721	ILMN_215721	EDF1	NM_021519.1	NM_021519.1		59022	10946941	NM_021519.1	Edf1	NP_067494.1	ILMN_2739033	001850477	S	600	ACGGGGGGTTAGGCCTGTGTGCCCCCTCAACCCATAACTGCTGTCAAACA	2	+	25417533-25417582	2qA3	Mus musculus endothelial differentiation-related factor 1 (Edf1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	0610008L11Rik; AA409425	0610008L11Rik; AA409425
Mus musculus	RefSeq	ILMN_215447	ILMN_215447	ZFP687	NM_030074.2	NM_030074.2		78266	142373364	NM_030074.2	Zfp687	NP_084350.1	ILMN_1217403	007040368	S	4443	CAGTGGGAGAAACAGGAGGGAGAAAACCAGACCATTAAAACTGCTTGTGG	3	-	94810763-94810812	3qF2.1	Mus musculus zinc finger protein 687 (Zfp687), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	4931408L03Rik; mKIAA1441	4931408L03Rik; mKIAA1441
Mus musculus	RefSeq	ILMN_216429	ILMN_329826	NNT	NR_003544.1	NR_003544.1		18115	147897665	NR_003544.1	Nnt		ILMN_1226968	004120653	S	171	TCTGCTAGCTCGGCGTGGCGTTTGCTCGCAGCCCGGGGTCGCCATCTGTC				13qD2.3	Mus musculus nicotinamide nucleotide transhydrogenase (Nnt), transcript variant 2, transcribed RNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+ [goid 8746] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD+ and B-specific (i.e. the pro-S hydrogen is transferred) with respect to NADP+ [goid 8750] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	BB168308; AI323702; 4930423F13Rik	BB168308; AI323702; 4930423F13Rik
Mus musculus	RefSeq	ILMN_199930	ILMN_199930	LOC381576	XM_355537.1	XM_355537.1			38079037	XM_355537.1	LOC381576		ILMN_2536994	003610035	S	740	GATTCGAAAGAGCCTCAGAGAGCTGCACTGGGTCCTATGGCTCCAGAAGA										
Mus musculus	RefSeq	ILMN_194531	ILMN_248322	PTPN1	NM_011201.3	NM_011201.3		19246	133505844	NM_011201.3	Ptpn1	NP_035331.3	ILMN_1222917	001430110	S	1639	TCTCAGGGCCTTAACCTGTTCAGGAGAAGTAGAGGAAATGCCAAATACTC	2	+	167802311-167802360	2qH3	Mus musculus protein tyrosine phosphatase, non-receptor type 1 (Ptpn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	PTP1B; PTP-HA2; PTP-1B	PTP1B; PTP-HA2; PTP-1B
Mus musculus	RefSeq	ILMN_224204	ILMN_259511	IGFBPL1	NM_018741.2	NM_018741.2		75426	144922625	NM_018741.2	Igfbpl1	NP_061211.1	ILMN_2776554	007400458	S	2212	CTCGGCCTCTGGTCCCAGTTGCTGCTCATGGCTGCCATTGTGTATTGGAG	4	-	45822846-45822895	4qB1	Mus musculus insulin-like growth factor binding protein-like 1 (Igfbpl1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	2810011G06Rik; 2810453O06Rik; IGFBPL	2810011G06Rik; 2810453O06Rik; IGFBPL
Mus musculus	RefSeq	ILMN_223681	ILMN_223681	ATP1B1	NM_009721.4	NM_009721.4		11931	145966745	NM_009721.4	Atp1b1	NP_033851.1	ILMN_2767615	004200605	S	2077	GTGATGGGTTGTGTTGTGCTCCGTGCTGAATGCTGTCTCGCCATCTCTCC				1qH2.2	Mus musculus ATPase, Na+/K+ transporting, beta 1 polypeptide (Atp1b1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]	Atpb; Atpb-1	Atpb; Atpb-1
Mus musculus	RefSeq	ILMN_208977	ILMN_208977	SERPINA12	NM_026535.2	NM_026535.2		68054	118129832	NM_026535.2	Serpina12	NP_080811.1	ILMN_2591394	002680750	S	3309	AACGGCTCCCTGAGGTACAGGAAAGCACATGGCAGGACAGTCAGATCCTA	12	-	105267310-105267359	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12 (Serpina12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	4632419J12Rik	4632419J12Rik
Mus musculus	RefSeq	ILMN_208977	ILMN_208977	SERPINA12	NM_026535.2	NM_026535.2		68054	118129832	NM_026535.2	Serpina12	NP_080811.1	ILMN_1218236	003890743	S	1361	GACCCTTCCTCATGATGATCTATGAGAATTTCATGCCTTCCATGGTCTTC	12	-	105269258-105269307	12qE	Mus musculus serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12 (Serpina12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	4632419J12Rik	4632419J12Rik
Mus musculus	Riken	ILMN_202408	ILMN_202408	2810417D19RIK	ri|2810417D19|ZX00035G23|AK013102|1468					AK013102	2810417D19Rik		ILMN_2549384	005900121	S	665	CTGAGGACCCAGCTTGTTATAAACAGGTATGGAATTCAACAGCCAACGGG										
Mus musculus	MEEBO	ILMN_223955	ILMN_223955	POLG2	scl39434.9.1_18				7657466	NM_015810	Polg2		ILMN_2772224	007510746	S	1253	CTGAGACTACGCTGGAAAATGGGCTAATCCAGCTGCGGAGCAGAGACACC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of coupling glycine to glycyl-tRNA, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6426] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IDA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly) [goid 4820] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]		
Mus musculus	RefSeq	ILMN_196883	ILMN_196883	LOC329087	XM_284762.2	XM_284762.2			38049376	XM_284762.2	LOC329087		ILMN_2588062	000520731	S	42	GCCTCCACAGTCAAGAGACAGAGCACTACGACAACATGGCCTCCACAGTC										
Mus musculus	RefSeq	ILMN_227638	ILMN_227638	PLA2G4D	NM_001024137.1	NM_001024137.1		78390	67906182	NM_001024137.1	Pla2g4d	NP_001019308.1	ILMN_3156124	003800332	A	2693	TTCCTCAGGGCCTGGCTGAGCGACAGTCTTGCACACCTATGGAAGCCACT	2	-	120092148-120092197	2qE5	Mus musculus phospholipase A2, group IVD (Pla2g4d), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a glycerophospholipid [goid 4620] [evidence IEA]	cPLA2delta; 2610311B01Rik; Pla2delta	cPLA2delta; 2610311B01Rik; Pla2delta
Mus musculus	RefSeq	ILMN_227638	ILMN_227638	PLA2G4D	NM_001024137.1	NM_001024137.1		78390	67906182	NM_001024137.1	Pla2g4d	NP_001019308.1	ILMN_3077168	006400438	I	1387	CAGATCAGAAGCTGTCAGGACAGAGAGCTGCACTGGAGAGGGGTCAGAAC	2	-	120096835-120096884	2qE5	Mus musculus phospholipase A2, group IVD (Pla2g4d), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a glycerophospholipid [goid 4620] [evidence IEA]	cPLA2delta; 2610311B01Rik; Pla2delta	cPLA2delta; 2610311B01Rik; Pla2delta
Mus musculus	MEEBO	ILMN_189157	ILMN_189157	CCNT2	scl0072949.1_78				51712406	XM_129395	Ccnt2		ILMN_1233199	005550040	S	12	TTGAACCTGGGATGTCAGGAGCTTCTTTGTGGGAACTCAGCCTAGCAGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	MEEBO	ILMN_189157	ILMN_189157	CCNT2	scl0072949.1_78				51712406	XM_129395	Ccnt2		ILMN_2458854	005270035	S	11	TTTGAACCTGGGATGTCAGGAGCTTCTTTGTGGGAACTCAGCCTAGCAGG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_213662	ILMN_213662	DHRS1	NM_026819.2	NM_026819.2		52585	31980843	NM_026819.2	Dhrs1	NP_081095.2	ILMN_2639397	000290576	S	1102	CAAGTGGGTCGTCACCCTCTACAACAGCAAATTCTAACCTCCTGACCTGC	14	-	56358084-56358120:56358121-56358133	14qC3	Mus musculus dehydrogenase/reductase (SDR family) member 1 (Dhrs1), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	D14Ertd484e; 1110029G07Rik; AW112170	D14Ertd484e; 1110029G07Rik; AW112170
Mus musculus	RefSeq	ILMN_215036	ILMN_215036	AK3	NM_021299.1	NM_021299.1		56248	23956103	NM_021299.1	Ak3	NP_067274.1	ILMN_1244147	004290735	S	2553	CGTTTCTCTACTGCCTTATTTGGATGTTGATAACCACTTCCTACAACCTG	19	-	29095470-29095519	19qC1	Mus musculus adenylate kinase 3 (Ak3), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate [goid 19201] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor) [goid 16776] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + AMP = nucleoside diphosphate + ADP [goid 46899] [evidence IEA]	AK-3; AI506714; AA407498; Akl3l; Ak3l1; Ak3l; 1700018L02Rik	AK-3; AI506714; AA407498; Akl3l; Ak3l1; Ak3l; 1700018L02Rik
Mus musculus	RefSeq	ILMN_215036	ILMN_215036	AK3	NM_021299.1	NM_021299.1		56248	23956103	NM_021299.1	Ak3	NP_067274.1	ILMN_2791121	001710674	S	2254	TCTTAGTGGGGCAAGGACCTGCCCTTACATATTGTGGCCTGAAGGGACAA	19	-	29095769-29095818	19qC1	Mus musculus adenylate kinase 3 (Ak3), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate [goid 19201] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor) [goid 16776] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + AMP = nucleoside diphosphate + ADP [goid 46899] [evidence IEA]	AK-3; AI506714; AA407498; Akl3l; Ak3l1; Ak3l; 1700018L02Rik	AK-3; AI506714; AA407498; Akl3l; Ak3l1; Ak3l; 1700018L02Rik
Mus musculus	RefSeq	ILMN_215902	ILMN_256327	LOC630837	XM_904200.2	XM_904200.2		630837	149274180	XM_904200.2	LOC630837	XP_909293.2	ILMN_2664963	002230129	S	159	GTCTTGGGTTCACCAGACTCCGGAGAAGAGGCTGGAGTGGGTTGCATACA					PREDICTED: Mus musculus similar to Ig mu-chain precursor (V76-D-J4), transcript variant 1 (LOC630837), mRNA.					
Mus musculus	RefSeq	ILMN_223969	ILMN_250993	IYD	NM_027391.3	NM_027391.3		70337	146141092	NM_027391.3	Iyd	NP_081667.1	ILMN_2772422	004260059	S	1426	TTATCTGAACATGAGTTGCATGGAGTGTGCCGGAGCTGGCTTGTGCTAGC				10qA1	Mus musculus iodotyrosine deiodinase (Iyd), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: iodide + H2O2 = iodine + 2 H2O [goid 4447] [evidence IDA]; Catalysis of the reaction: iodide + H2O2 = iodine + 2 H2O [goid 4447] [evidence ISA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	0610009A07Rik; AI265638	0610009A07Rik; AI265638
Mus musculus	RefSeq	ILMN_211599	ILMN_211599	BCL2L12	NM_029410.2	NM_029410.2		75736	141801687	NM_029410.2	Bcl2l12	NP_083686.1	ILMN_1236489	004390273	S	317	CACGGAGTCCTCTAGGCCCCACTTCCTTCCCCTCCGCCCCTGCTATGGTT	7	-	52251922-52251971	7qB4	Mus musculus BCL2-like 12 (proline rich) (Bcl2l12), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]		Bcl-L12; 5430429M05Rik; Bcl2-L12; 2810475P17Rik	Bcl-L12; 5430429M05Rik; Bcl2-L12; 2810475P17Rik
Mus musculus	RefSeq	ILMN_197074	ILMN_316077	LOC668164	XR_032875.1	XR_032875.1		668164	149263542	XR_032875.1	LOC668164		ILMN_1243140	001450575	S	369	TCCAGAGTGCAGATACTGGTGCTGAGCAGGAGGCAAGTGAGGCCTATCGG	12	+	109952354-109952403	12qF1	PREDICTED: Mus musculus similar to H3 histone, family 3A (LOC668164), misc RNA.					
Mus musculus	RefSeq	ILMN_197127	ILMN_197127	LOC381333	XM_355291.1	XM_355291.1			38074203	XM_355291.1	LOC381333		ILMN_1239900	004290373	S	944	CGCGCACGAGGGCGCAGAGAACCAGAACACCCTTTGTTTTGCAATCTTCA										
Mus musculus	RefSeq	ILMN_210641	ILMN_210641	XRCC6	NM_010247.1	NM_010247.1		14375	6753927	NM_010247.1	Xrcc6	NP_034377.1	ILMN_2862619	000830041	S	2112	GTGCAAAATCATGGAGATTACAGTCTCCCACCTCACTGTGCCTTACTCTG	15	+	81867269-81867318	15qE1	Mus musculus X-ray repair complementing defective repair in Chinese hamster cells 6 (Xrcc6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process by which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33151] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50769] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	70kDa; Ku70; G22p1	70kDa; Ku70; G22p1
Mus musculus	RefSeq	ILMN_200364	ILMN_200364	LOC386325	XM_359171.1	XM_359171.1			38081432	XM_359171.1	LOC386325		ILMN_1252614	004920333	S	53	AGGTGATGTCCCATAGAAATAGCACAGCAGGCGCGACAATTGGTGGCCCG										
Mus musculus	Riken	ILMN_203318	ILMN_203318	RAX	ri|E130104K16|PX00091P01|AK053517|1872					AK053517	Rax		ILMN_2556389	003840477	S	1395	CTAGCTCAGGGCTTTGTCACCTATTGTCACACTGCTTGGTGTCCCATAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of the hypothalamus region of the forebrain, from its initial formation to its mature state [goid 21854] [evidence IMP]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212717	ILMN_212717	EG328354	NM_177813.2	NM_177813.2		328354	31342957	NM_177813.2	EG328354	NP_808481.1	ILMN_2909293	001450474	S	1716	AGGAACAGACTAAAACCTTTGTTGATGCTCTTAAATCTGCTTTTCCATCC	14	-	11950810-11950859	14qA1	Mus musculus predicted gene, EG328354 (EG328354), mRNA.				C630025C03	C630025C03
Mus musculus	RefSeq	ILMN_220116	ILMN_220116	OLFR1183	NM_146529.2	NM_146529.2		258522	112983490	NM_146529.2	Olfr1183	NP_666740.1	ILMN_1259838	004730056	S	769	CGCCCACCAACCACCTTCCCAATAGACAAGATGGTGTCTGTGTTTTATAC	2	+	88302267-88302316	2qD	Mus musculus olfactory receptor 1183 (Olfr1183), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR230-6	MOR230-6
Mus musculus	MEEBO	ILMN_223376	ILMN_223376	B130040O20RIK	scl41619.1.1_148	NM_177300.2			31343285	NM_177300.2	B130040O20Rik		ILMN_2763235	004260608	S	3318	CAGAAAACTAATGAGACAAGACAACCAGGTACAGGGTCCATAGCCCTTGG										
Mus musculus	RefSeq	ILMN_199815	ILMN_314766	LOC628070	XR_035501.1	XR_035501.1		628070	149251574	XR_035501.1	LOC628070		ILMN_1222971	007210187	S	143	AGGACATCAATGTTCAGAAAGGCGGCATCTCATGGTGCTGGCTGCCTACG				3qF1	PREDICTED: Mus musculus similar to LOC506492 protein (LOC628070), misc RNA.					
Mus musculus	Riken	ILMN_205786	ILMN_205786	D230019G01RIK	ri|D230019G01|PX00188O12|AK051921|3638					AK051921	D230019G01Rik		ILMN_1252675	000060747	S	3404	CTACACCAGTGGCTTTGTTCTGTGCCCACCAAACTGAGGATTTGTGCTTG										
Mus musculus	Riken	ILMN_206639	ILMN_206639	4930417F03RIK	ri|4930417F03|PX00313P12|AK076704|2607					AK076704	4930417F03Rik		ILMN_1226262	004230082	S	70	CGAGAGGAAGCACAAAGGCTGCCGGGAAGCATGCCCGGGCTGTAGGCCAA										
Mus musculus	RefSeq	ILMN_194274	ILMN_194274	TLR7	NM_133211.3	NM_133211.3		170743	141803199	NM_133211.3	Tlr7	NP_573474.1	ILMN_1245354	001570487	S	3329	GGAAACAGTCTAGCTCTCTGAAGAATGTCACCACCTAGGACATGCCTTGG	X	-	163743230-163743267:163743268-163743279	XqF5	Mus musculus toll-like receptor 7 (Tlr7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with single-stranded RNA [goid 3727] [evidence IMP]; Interacting selectively with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme [goid 35197] [evidence IMP]		
Mus musculus	RefSeq	ILMN_213302	ILMN_213302	RASSF4	NM_178045.3	NM_178045.3		213391	40254291	NM_178045.3	Rassf4	NP_835146.2	ILMN_2956092	006940324	S	6200	TGCATTTTTTCCTAGTCCACCAGTGCCCACCACCATTGCTCACCGCTGGC	6	-	116583075-116583124	6qE3	Mus musculus Ras association (RalGDS/AF-6) domain family member 4 (Rassf4), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI586137; AD037; 3830411C14Rik	AI586137; AD037; 3830411C14Rik
Mus musculus	RefSeq	ILMN_213302	ILMN_213302	RASSF4	NM_178045.3	NM_178045.3		213391	40254291	NM_178045.3	Rassf4	NP_835146.2	ILMN_2672698	006480736	S	406	CAAGGTCCCCACTGAAGAGCCTGGCACTCAACCTGCAAACAAGGCAGAGG	6	-	116595921-116595970	6qE3	Mus musculus Ras association (RalGDS/AF-6) domain family member 4 (Rassf4), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI586137; AD037; 3830411C14Rik	AI586137; AD037; 3830411C14Rik
Mus musculus	RefSeq	ILMN_213302	ILMN_213302	RASSF4	NM_178045.3	NM_178045.3		213391	40254291	NM_178045.3	Rassf4	NP_835146.2	ILMN_2956095	004570692	S	6115	GGCAAGAAGGATGCTCTCTCTACCTTTAAGTGAGGCAACAAAGACTTACG	6	-	116583160-116583209	6qE3	Mus musculus Ras association (RalGDS/AF-6) domain family member 4 (Rassf4), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI586137; AD037; 3830411C14Rik	AI586137; AD037; 3830411C14Rik
Mus musculus	RefSeq	ILMN_213302	ILMN_213302	RASSF4	NM_178045.3	NM_178045.3		213391	40254291	NM_178045.3	Rassf4	NP_835146.2	ILMN_2686244	000730138	S	6184	AGTGCATTTTGGCTCTTGCATTTTTTCCTAGTCCACCAGTGCCCACCACC	6	-	116583091-116583140	6qE3	Mus musculus Ras association (RalGDS/AF-6) domain family member 4 (Rassf4), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI586137; AD037; 3830411C14Rik	AI586137; AD037; 3830411C14Rik
Mus musculus	RefSeq	ILMN_222804	ILMN_222804	ZFP650	NM_177783.4	NM_177783.4		68795	146198821	NM_177783.4	Zfp650	NP_808451.1	ILMN_2755046	003450133	S	1166	GAGTTCCCACAGAAGATGGTAACTTTCTTGCTCAATATGCTCCCAGATCA				2qC2	Mus musculus zinc finger protein 650 (Zfp650), transcript variant 2, mRNA.				Ubr3; 1110059H15Rik; Znf650; AA414972; AA409735; A130030D10Rik; AI646861; 4833421P10Rik; AU016126; AA422631	Ubr3; 1110059H15Rik; Znf650; AA414972; AA409735; A130030D10Rik; AI646861; 4833421P10Rik; AU016126; AA422631
Mus musculus	RefSeq	ILMN_197774	ILMN_227701	4930407I10RIK	XM_986904.1	XM_986904.1		328573	94399136	XM_986904.1	4930407I10Rik	XP_991998.2	ILMN_1257654	001410162	S	4373	AGACGTGAACTGCAGCCGATTCCCCACTGCTTTAGAGAAGGACCTGGGGC				15qE1	PREDICTED: Mus musculus RIKEN cDNA 4930407I10 gene (4930407I10Rik), mRNA.					
Mus musculus	MEEBO	ILMN_185666	ILMN_185666	1700010H15RIK	scl3741.1.1_294				51766928	XM_356594	1700010H15Rik		ILMN_1238043	000620014	S	8	CCCCACAGGATCAGGAGCACCATACATTTGCCAGTGTACAGTCTGTGCTG										
Mus musculus	MEEBO	ILMN_185666	ILMN_185666	1700010H15RIK	scl3741.1.1_294				51766928	XM_356594	1700010H15Rik		ILMN_2535392	002570133	S	166	TGCCTGGAGGACCTGGTGTTCGTCGGTAATCCCCTGGAGGAGAAACACTC										
Mus musculus	Riken	ILMN_206600	ILMN_206600	UBR1	ri|E030010C03|PX00205G06|AK086900|1345					AK086900	Ubr1		ILMN_1215965	000630692	S	1056	TCCTGTGTTTTTAGAGCACCTGCAAGCCAGGGAGGGAGAGCATGGGGCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IGI]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence IGI]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IGI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IGI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198344	ILMN_198344	LOC381178	XM_355102.1	XM_355102.1			38084061	XM_355102.1	LOC381178		ILMN_1223397	001940446	S	877	GCTTTTCCTCAGAACCACAGCTCTGAAGCCCTCACTGTGCTCAGTCACCC										
Mus musculus	RefSeq	ILMN_186320	ILMN_186320	TRIM21	NM_009277.3	NM_009277.3		20821	127139139	NM_009277.3	Trim21	NP_033303.3	ILMN_3139158	005670398	A	2382	GCTGGGTCTGGTCAGTGAACCCCTGCTGTTGACTCTCACAAGGCTACAAC	7	-	109706779-109706828	7qE3	Mus musculus tripartite motif-containing 21 (Trim21), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ssa1; Ro52	Ssa1; Ro52
Mus musculus	RefSeq	ILMN_186320	ILMN_186320	TRIM21	NM_009277.3	NM_009277.3		20821	127139139	NM_009277.3	Trim21	NP_033303.3	ILMN_3061663	005860369	I	97	TTCTGCCTGGCTTGCTCAGTGGGTGAGGCCGGAGGAGAGGCTCCTGTCAT	7	-	109712789-109712838	7qE3	Mus musculus tripartite motif-containing 21 (Trim21), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Ssa1; Ro52	Ssa1; Ro52
Mus musculus	RefSeq	ILMN_199555	ILMN_199555	LOC383630	XM_357164.1	XM_357164.1			38074295	XM_357164.1	LOC383630		ILMN_1252082	007650626	S	653	CATGGGGCTGCATGCCTCTGAGCCCTGTGGAGCCTGGAATGGTGATGGTT										
Mus musculus	RefSeq	ILMN_197231	ILMN_310665	LOC271788	XM_001477205.1	XM_001477205.1		271788	149249286	XM_001477205.1	LOC271788	XP_001477255.1	ILMN_1254783	002370309	S	369	ATGCAGGGCTGGTGACGGCTTCATTACCTGGCCTCTCGAGGGACTCTTAG	2	-	57277534-57277583	2qC1.1	PREDICTED: Mus musculus similar to Charged multivesicular body protein 6 (Chromatin-modifying protein 6) (LOC271788), mRNA.					
Mus musculus	RefSeq	ILMN_211095	ILMN_211095	LCORL	NM_172153.2	NM_172153.2		209707	118130079	NM_172153.2	Lcorl	NP_742165.1	ILMN_1238589	002470343	S	1573	GGACCGGAAAGATAATAAGCAGCCCAGGAAAAAACGTGGCCGCTATCGAC	5	-	46124930-46124979	5qB3	Mus musculus ligand dependent nuclear receptor corepressor-like (Lcorl), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]	Mlr1; A830039H10Rik	Mlr1; A830039H10Rik
Mus musculus	RefSeq	ILMN_211095	ILMN_211095	LCORL	NM_172153.2	NM_172153.2		209707	118130079	NM_172153.2	Lcorl	NP_742165.1	ILMN_2612474	000620500	S	4763	ATTCATGTATCTGTCTTGTGTTGTACATGTACTGTAATTTTGTTCCTACT	5	-	46121740-46121789	5qB3	Mus musculus ligand dependent nuclear receptor corepressor-like (Lcorl), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]	Mlr1; A830039H10Rik	Mlr1; A830039H10Rik
Mus musculus	RefSeq	ILMN_218127	ILMN_218127	RAB15	NM_134050.3	NM_134050.3		104886	142348473	NM_134050.3	Rab15	NP_598811.2	ILMN_1217009	006590343	S	3001	CTCCCTGTGATGGGTGACCTTTGTGTACTGTGTCTTGGGTCCATTATATG	12	-	77899017-77899066	12qC3	Mus musculus RAB15, member RAS oncogene family (Rab15), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AI840042; 2310012G06Rik	AI840042; 2310012G06Rik
Mus musculus	RefSeq	ILMN_221913	ILMN_221913	OLFR341	NM_146950.1	NM_146950.1		258952	22203812	NM_146950.1	Olfr341	NP_667161.1	ILMN_1237204	007510059	S	883	CGGGATATAAAAGGAGCATTGAGAAATATCCTCAACAGGAGACTGTGTCC	2	-	36334716-36334765	2qB	Mus musculus olfactory receptor 341 (Olfr341), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR136-2	MOR136-2
Mus musculus	RefSeq	ILMN_188713	ILMN_230634	SNW1	NM_025507.2	NM_025507.2		66354	146149190	NM_025507.2	Snw1	NP_079783.2	ILMN_2756618	001690259	S	1712	TGAACAGATGTCCCCACCCCCTCCAGACACTTGAGACTCCAGGGAATAGG				12qD2	Mus musculus SNW domain containing 1 (Snw1), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISO]; Interacting selectively with the vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes [goid 42809] [evidence ISO]	NCoA-62; SKIP; 2310008B08Rik; AW048543; Skiip	NCoA-62; SKIP; 2310008B08Rik; AW048543; Skiip
Mus musculus	MEEBO	ILMN_211546	ILMN_211546	BMP2	scl20248.2.8_19	NM_007553.1			6680793	NM_007553.1	Bmp2		ILMN_2616888	002190010	S	562	CAAGGACGTCGTGGTGCCCCCCTATATGCTAGATCTGTACCGCAGGCACT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of astrocyte differentiation [goid 48711] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of astrocyte differentiation [goid 48711] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence ISO]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence ISO]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence TAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IDA]; Branching of the ureteric bud [goid 1658] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual [goid 35051] [evidence ISO]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence ISO]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12151307] [evidence IEP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence TAS]		
Mus musculus	RefSeq	ILMN_196750	ILMN_196750	H2-T23	NM_010398.3	NM_010398.3		15040	149363639	NM_010398.3	H2-T23	NP_034528.1	ILMN_1223179	002350181	S	1018	GGAGGAGACACATAGGTGTAAAAGGATGCTATGCTCATGTTCTAGGCAGC				17qB1	Mus musculus histocompatibility 2, T region locus 23 (H2-T23), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]		T23d; MGC117681; Qed-1; T18c(37); Qa1; H-2T23; 37c; Qa-1; 37b; T23b; T18c	T23d; MGC117681; Qed-1; T18c(37); Qa1; H-2T23; 37c; Qa-1; 37b; T23b; T18c
Mus musculus	RefSeq	ILMN_253759	ILMN_253759	4930449I24RIK	NM_026136.1	NM_026136.1		67410	13385645	NM_026136.1	4930449I24Rik	NP_080412.1	ILMN_2933982	004570411	S	876	TGAGGCTGCAGATGTTGCTGCAGATGTTTCACTTGCCAGGCAATTATTCG	5	-	4829-4878	5qG3	Mus musculus RIKEN cDNA 4930449I24 gene (4930449I24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_189925	ILMN_252486	UBN1	NM_026666.3	NM_026666.3		170644	142368745	NM_026666.3	Ubn1	NP_080942.1	ILMN_1214914	002370382	S	915	GAATCCTGCATTTTTGAAGAAGTCCAGGAAAGAGGAAGTTGGAGGAACAG	16	+	5055256-5055305	16qA1	Mus musculus ubinuclein 1 (Ubn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence TAS]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]	MGC102206; AW124741; 2610108L02Rik; 1110029L11Rik; AA673476	MGC102206; AW124741; 2610108L02Rik; 1110029L11Rik; AA673476
Mus musculus	RefSeq	ILMN_210542	ILMN_235369	LRRN2	NM_010732.2	NM_010732.2		16980	144922709	NM_010732.2	Lrrn2	NP_034862.1	ILMN_2670344	006370482	S	3203	CCTGGGCTCTGAAGTTGACTTTCTATAGGCAATTTTGTATCTTTGTGGAG	1	+	134836439-134836488	1qE4	Mus musculus leucine rich repeat protein 2, neuronal (Lrrn2), mRNA.				5730406J09Rik; NLRR-2	5730406J09Rik; NLRR-2
Mus musculus	Riken	ILMN_206811	ILMN_206811	KLF7	ri|D930007C01|PX00200G18|AK086122|2481					AK086122	Klf7		ILMN_1241890	004850367	S	2278	GACAGCAACCTTCAAGATCCTTGGCACTTGGGTTCTCAGCTTTCTACGGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218688	ILMN_218688	ARRB1	NM_178220.3	NM_178220.3		109689	79750060	NM_178220.3	Arrb1	NP_835738.1	ILMN_3096335	000780673	A	6702	GTGAGGGGATAGGGTCTTAGCCTGAGTTGCTGACCCACATAGCCCACAAC	7	+	106754895-106754944	7qE2	Mus musculus arrestin, beta 1 (Arrb1), transcript variant b, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1200006I17Rik; AW208571; MGC124269; MGC124270; G430100A01Rik	1200006I17Rik; AW208571; MGC124269; MGC124270; G430100A01Rik
Mus musculus	RefSeq	ILMN_239345	ILMN_239345	OTTMUSG00000010671	NM_001039209.2	NM_001039209.2		195531	110665707	NM_001039209.2	OTTMUSG00000010671	NP_001034298.1	ILMN_2904930	007610326	S	864	GACAAACGCAATCTGAGAAGGCATCAGAAAATTCATACAGGAGAGAAACC	4	+	146887137-146887156:146887828-146887857	4qE1	Mus musculus predicted gene, OTTMUSG00000010671 (OTTMUSG00000010671), mRNA. XM_902017 XM_902018 XM_902020 XM_902022 XM_902023	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC60813	MGC60813
Mus musculus	RefSeq	ILMN_199764	ILMN_235325	EG433643	XM_485297.4	XM_485297.4		433643	94369868	XM_485297.4	EG433643	XP_485297.3	ILMN_1251769	006270543	S	265	GACTCTGACGCGACCAGCAGTGCCTGTCCGGAATTGGTGTATTTCTTCAC	3	-	112856981-112857030	3qF3	PREDICTED: Mus musculus predicted gene, EG433643 (EG433643), mRNA.					
Mus musculus	RefSeq	ILMN_216888	ILMN_216888	CNTN4	NM_173004.1	NM_173004.1		269784	27370507	NM_173004.1	Cntn4	NP_766592.1	ILMN_2968538	005560639	S	2377	CATTCTCCGTGGGCTGGCAAGCAGTCAATACAGTTCCAGATCTCGTCGAC	6	+	106633280-106633311:106638564-106638581	6qE1	Mus musculus contactin 4 (Cntn4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BIG-2A; Axcam; 9630050B05	BIG-2A; Axcam; 9630050B05
Mus musculus	MEEBO	ILMN_193858	ILMN_193858	NDUFB8	scl52441.8_4				13385557	NM_026061	Ndufb8		ILMN_2501071	002810521	S	12	GCCTAAAGGGTACATGTGTCACTGAGAACTACTCCAACCCTGACCTCTAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200357	ILMN_200357	LOC386289	XM_359161.1	XM_359161.1			38081408	XM_359161.1	LOC386289		ILMN_1247615	000770603	S	559	AGACCACCAACAGATTGCATCCAAACGCTGACACCATTGCATACACTGGC										
Mus musculus	RefSeq	ILMN_192784	ILMN_261444	DYNLRB1	NM_025947.2	NM_025947.2		67068	141802705	NM_025947.2	Dynlrb1	NP_080223.1	ILMN_2589814	004280523	S	316	CCAGAATCCAACTGAATAAGCCACTGTCTGGGCTTCCTGTGTCATTCCTT	2	+	155075682-155075700:155075701-155075731	2qH1	Mus musculus dynein light chain roadblock-type 1 (Dynlrb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence ISO]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence ISO]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AV124457; Dncl2a; MGC159351; 2010320M17Rik; DNLC2A; 2010012N15Rik; 9430076K19Rik; MGC159313	AV124457; Dncl2a; MGC159351; 2010320M17Rik; DNLC2A; 2010012N15Rik; 9430076K19Rik; MGC159313
Mus musculus	Riken	ILMN_201687	ILMN_201687	2610028H07RIK	ri|2610028H07|ZX00034C23|AK011590|1134					AK011590	2610028H07Rik		ILMN_1256792	004120685	S	747	GCATCAGCCTGTCACTCGGAATCGGCAAACTTTACTGACCACTCAGAGCC										
Mus musculus	RefSeq	ILMN_220846	ILMN_220846	GPT2	NM_173866.3	NM_173866.3		108682	146198526	NM_173866.3	Gpt2	NP_776291.1	ILMN_1234702	001340026	S	3509	GCATCATCAGTTCTTCCGCCTCCTTAGCATGGTTCTTTGTAACAGCCATG				8qC3	Mus musculus glutamic pyruvate transaminase (alanine aminotransferase) 2 (Gpt2), mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the reaction: L-alanine + 2-oxoglutarate = pyruvate + L-glutamate [goid 4021] [evidence IEA]	AU041193; AU014768; C87201; 4631422C05Rik; ALT2	AU041193; AU014768; C87201; 4631422C05Rik; ALT2
Mus musculus	RefSeq	ILMN_196897	ILMN_196897	LOC212855	XM_138001.2	XM_138001.2			38049459	XM_138001.2	LOC212855		ILMN_1256878	004850048	S	924	TGTTAACAGGGAAGGCACCCTACCTGCCTGCATCCCTGTGACCCACACTG										
Mus musculus	MEEBO	ILMN_184947	ILMN_184947	MKRN1-PS1	scl10306.1.1_57						Mkrn1-ps1		ILMN_1250532	006620102	S	19	CACCTGCAGATATTTTATTCGTGGGGTTTGTAAGGAAGGCGATAACTGTC										
Mus musculus	Riken	ILMN_202627	ILMN_202627	C030014F05RIK	ri|C030014F05|PX00074E22|AK021080|1227					AK021080	C030014F05Rik		ILMN_2551055	005260519	S	864	CCACCCCACAGTGTTTCCAAAACGTCTCGTTCATTCTGTAACGCCTCCTC										
Mus musculus	RefSeq	ILMN_212358	ILMN_212358	HSF2	NM_008297.2	NM_008297.2		15500	31560683	NM_008297.2	Hsf2	NP_032323.2	ILMN_2625520	003870066	S	2060	CTGTTAGCAGAAACGGCAAAGTGTACACGAGTACTCAGTCACTGATGTGG	10	+	57232487-57232536	10qB4	Mus musculus heat shock factor 2 (Hsf2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AI661205	AI661205
Mus musculus	RefSeq	ILMN_199085	ILMN_199085	LOC380665	XM_354567.1	XM_354567.1			38090844	XM_354567.1	LOC380665		ILMN_1237333	000940563	S	302	GTCACACTGGCAACTTTGAAAATGTCTGGAAAGCGATCTGCTCCTGGAGG										
Mus musculus	RefSeq	ILMN_222598	ILMN_222598	OLFR1451	NM_146705.1	NM_146705.1		258700	22129430	NM_146705.1	Olfr1451	NP_666916.1	ILMN_1254141	001820309	S	665	CTGTCTTGAAGATGAAGTCAGACCAGGGACACCAAAAAGCTTTGTCCACC	19	+	13074142-13074191	19qA	Mus musculus olfactory receptor 1451 (Olfr1451), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-1	MOR202-1
Mus musculus	MEEBO	ILMN_212178	ILMN_212178	LRRC6	scl47126.12.1_4				9506866	NM_019457	Lrrc6		ILMN_2770744	003870612	S	1584	ATAGTTCATTATCATTTTTACCTGATGCTATAATGCTTTCCATGCATTGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220404	ILMN_220404	DCTN6	NM_011722.2	NM_011722.2		22428	142368025	NM_011722.2	Dctn6	NP_035852.1	ILMN_1233586	007610730	S	567	AAGAACTGAGAAGATGTCAGTGGTGCTCGGTTCTGCCAGCTGTCAGCGGG	8	-	35153756-35153797:35153798-35153805	8qA4	Mus musculus dynactin 6 (Dctn6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence NAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence NAS]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence NAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Interacting selectively with dynein, the multisubunit protein complex that is associated with microtubules [goid 45502] [evidence IDA]	WS-3; p27; AU044699	WS-3; p27; AU044699
Mus musculus	MEEBO	ILMN_195172	ILMN_195172	ACP2	scl20637.10_518				29150252	NM_007387	Acp2		ILMN_2513205	005390647	S	10	GAGGTTGTGCCGTGAATGCCAGGTCGCCTAGGAAACAGAGAGGTCAGTCA						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IMP]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186343	ILMN_186343	PSMC6	scl46422.14_261				27754102	NM_025959	Psmc6		ILMN_2434727	006480521	S	12	ATTCTAATTTCATGTGGCAATCAAAAGTTGTATAAGGAAATTGTCAATGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185509	ILMN_185509	TMEM5	NM_153059.1	NM_153059.1		216395	23346448	NM_153059.1	Tmem5	NP_694699.1	ILMN_1220415	002570553	S	20	CTCTTCATGATAGAAGAACATTCTATGTTAGGTTTAACGAAAGGTGCTCT	10	-	121534089-121534127:121534128-121534138	10qD2	Mus musculus transmembrane protein 5 (Tmem5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			6330415D21Rik; MGC103359; MGC28135	6330415D21Rik; MGC103359; MGC28135
Mus musculus	RefSeq	ILMN_185509	ILMN_185509	TMEM5	NM_153059.1	NM_153059.1		216395	23346448	NM_153059.1	Tmem5	NP_694699.1	ILMN_2901227	007550100	S	1061	GAGGCCTGCTCCTTTGGCTCCATTCCTGTGGTAGAAGATGTGATGACAGC	10	-	121518583-121518632	10qD2	Mus musculus transmembrane protein 5 (Tmem5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			6330415D21Rik; MGC103359; MGC28135	6330415D21Rik; MGC103359; MGC28135
Mus musculus	Riken	ILMN_206074	ILMN_206074	LTBP2	ri|D930007I24|PX00200N18|AK052980|4019					AK052980	Ltbp2		ILMN_1218365	000520154	S	3611	CAAACCATTTCACAGAGGAAAAAGCATCTGGCCCTCTTCCCTGGTCCCGG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220239	ILMN_220239	FGF12	NM_010199.2	NM_010199.2		14167	118129945	NM_010199.2	Fgf12	NP_034329.1	ILMN_1221164	000160369	S	86	GGCGAAAGCATCAGATTGGCTTTCCAGATTTGGGGATCTGAAGCGGGCCC	16	-	28752984-28753033	16qB2	Mus musculus fibroblast growth factor 12 (Fgf12), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Fhf1; AV114868	Fhf1; AV114868
Mus musculus	RefSeq	ILMN_218802	ILMN_220239	FGF12	NM_010199.2	NM_010199.2		14167	118129945	NM_010199.2	Fgf12	NP_034329.1	ILMN_1243357	005390338	S	2864	GAAGGGAAGTGCCTGGAGTTTACGGTGAGATGTTTACTCAACCATAGTGC	16	-	28160322-28160371	16qB2	Mus musculus fibroblast growth factor 12 (Fgf12), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Fhf1; AV114868	Fhf1; AV114868
Mus musculus	MEEBO	ILMN_216138	ILMN_216138	MX2	scl017858.14_123				7549778	NM_013606	Mx2		ILMN_1239219	000520278	S	2142	CCTGCCTTTCCTGGTAGCTATACCACCAGCCTTTATGCTCTGATAAGTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence TAS]		
Mus musculus	MEEBO	ILMN_224023	ILMN_224023	DLX2	scl19152.3_218				6753645	NM_010054	Dlx2		ILMN_2773364	000020471	S	1889	TCCCAGCTCTCCCAACTCTTCCCGCCTCCCACTTTCCCCAGGAACACTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IMP]; The process by which the anatomical structures of branches in a nerve are generated and organized. Morphogenesis pertains to the creation of form. This term refers to an anatomical structure (nerve) not a cell (neuron) [goid 48755] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte differentiation [goid 48715] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex [goid 21772] [evidence IMP]; The process whereby the developmental fate of a neuroblast becomes restricted such that it will develop into a GABAergic interneuron residing in the cerebral cortex [goid 21893] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain [goid 21882] [evidence IGI]	Interacting selectively with single-stranded RNA [goid 3727] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Mus musculus	Riken	ILMN_205412	ILMN_205412	E130016A22RIK	ri|E130016A22|PX00208F07|AK053413|2920					AK053413	E130016A22Rik		ILMN_1257665	000630022	S	2770	TCCTTCTCCTCGAAGCATCCTGAAAGCCCAGAGAGCACAGCACAGCGCAG										
Mus musculus	RefSeq	ILMN_212511	ILMN_212511	EEF1B2	NM_018796.2	NM_018796.2		55949	31980921	NM_018796.2	Eef1b2	NP_061266.2	ILMN_2874853	007570484	S	428	GTGAGGAAGCAAAGAAGCTACGAGAAGAACGCCTTGCACAGTATGAGTCC	1	+	63225410-63225459	1qC2	Mus musculus eukaryotic translation elongation factor 1 beta 2 (Eef1b2), mRNA.	A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence ISS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence ISS]	Eef1b; 2810017J07Rik	Eef1b; 2810017J07Rik
Mus musculus	RefSeq	ILMN_212511	ILMN_212511	EEF1B2	NM_018796.2	NM_018796.2		55949	31980921	NM_018796.2	Eef1b2	NP_061266.2	ILMN_2708644	005310368	S	353	CCACAGGAAGTGGAGCTGCAGATGCTAAGGATGATGACGACATTGATCTC	1	+	63225069-63225118	1qC2	Mus musculus eukaryotic translation elongation factor 1 beta 2 (Eef1b2), mRNA.	A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence ISS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence ISS]	Eef1b; 2810017J07Rik	Eef1b; 2810017J07Rik
Mus musculus	RefSeq	ILMN_212511	ILMN_212511	EEF1B2	NM_018796.2	NM_018796.2		55949	31980921	NM_018796.2	Eef1b2	NP_061266.2	ILMN_1229042	005050056	S	22	CTCAGCGCTGGCCGCGGCCTCCCGGCGCTCTCGTCCTCCGCTTTTGCACA	1	+	63223714-63223763	1qC2	Mus musculus eukaryotic translation elongation factor 1 beta 2 (Eef1b2), mRNA.	A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence ISS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence ISS]	Eef1b; 2810017J07Rik	Eef1b; 2810017J07Rik
Mus musculus	RefSeq	ILMN_231076	ILMN_231076	4932430I15RIK	NM_001033815.1	NM_001033815.1		619319	85702156	NM_001033815.1	4932430I15Rik	NP_001028987.1	ILMN_3161004	003390246	S	3005	GTGAGCAAGGGCCACGGGAATGATGATGTGCAGCTGAGAAAAGGCTTCGG	5	-	93879675-93879724		Mus musculus RIKEN cDNA 4932430I15 gene (4932430I15Rik), mRNA.					
Mus musculus	MEEBO	ILMN_223938	ILMN_223938	ASFGF2A	scl0002092.1_13				25991461	AF453427	Asfgf2a		ILMN_2771836	003800040	S	38	GCGTAGGCACCGCCGTTGACGTTATGAACCCTTGAAAAGTGGACTTCGGC										
Mus musculus	RefSeq	ILMN_210513	ILMN_210513	SDAD1	NM_172713.2	NM_172713.2		231452	142366971	NM_172713.2	Sdad1	NP_766301.1	ILMN_1250278	006290379	S	4651	CAAAGGAAAGCGGAGAGCACAGCAGCTTCAGCCACAGTCAACAGCACAAC	5	-	92713355-92713404	5qE2	Mus musculus SDA1 domain containing 1 (Sdad1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		AA591032; 4931421J16; AW538460	AA591032; 4931421J16; AW538460
Mus musculus	RefSeq	ILMN_196346	ILMN_196346	DEFCR20	NM_183268.1	NM_183268.1		68009	34304055	NM_183268.1	Defcr20	NP_899091.1	ILMN_2739019	007100274	S	82	CTGGCCTTCCAGGTCCAGGCTGATCCTATCCAAAACACAGATGAGGAGAC	8	+	22974882-22974931	8qA2	Mus musculus defensin related cryptdin 20 (Defcr20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		2010016F14Rik; cryptdin4	2010016F14Rik; cryptdin4
Mus musculus	RefSeq	ILMN_192852	ILMN_243516	ANKFY1	NM_009671.5	NM_009671.5		11736	118130294	NM_009671.5	Ankfy1	NP_033801.4	ILMN_2771712	001070646	S	6816	ACTGACTTGCCAGTTTGGCAGCTGTGTGGAACTGGGCGTTCCATGATATC	11	+	72584430-72584479	11qB4	Mus musculus ankyrin repeat and FYVE domain containing 1 (Ankfy1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence NAS]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ZFYVE14; Ankhzn; mKIAA1255	ZFYVE14; Ankhzn; mKIAA1255
Mus musculus	RefSeq	ILMN_239136	ILMN_239136	SERPINB3C	NM_201363.1	NM_201363.1		381286	41235742	NM_201363.1	Serpinb3c	NP_958751.1	ILMN_2824178	004260438	S	650	TGTTCAGCTTTCTGGAGGATGTGCAGGCCCAGATTGTGGAAATACCATAC	1	-	109169289-109169338	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 3C (Serpinb3c), mRNA.			Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Scca2; Serpinb4; 1110001H02Rik; 1110013A16Rik	Scca2; Serpinb4; 1110001H02Rik; 1110013A16Rik
Mus musculus	MEEBO	ILMN_185708	ILMN_185708	E430029J22RIK	scl00319836.1_185				51779101	XM_486411	E430029J22Rik		ILMN_2429336	006400022	S	10	GGTCACTCATTTTGTTTTAAAACTGAAGAACTAATGTTTACTTCATTATA								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185708	ILMN_185708	E430029J22RIK	scl00319836.1_185				51779101	XM_486411	E430029J22Rik		ILMN_2521729	003060356	S	2	GGTCTTAACAGGCTACATATAGTAGTTTCATTTCACTAGGACTATCACAT								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214917	ILMN_251967	3200001K10RIK	XM_920610.2	XM_920610.2		381626	94374365	XM_920610.2	3200001K10Rik	XP_925703.1	ILMN_2653444	005090138	S	1766	GGAGCCACTAACAGCCCTTTTGAGACTTTAGTCCCATGCATTGCCCAGGA				5qB1	PREDICTED: Mus musculus RIKEN cDNA 3200001K10 gene, transcript variant 5 (3200001K10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213322	ILMN_213322	MFSD8	NM_028140.4	NM_028140.4		72175	146141130	NM_028140.4	Mfsd8	NP_082416.2	ILMN_2635968	007150670	S	2626	CCCAGCCCTAGAATTCTAATACTGCCATTCAGAAAGCTACAACCCAGCAA				3qB	Mus musculus major facilitator superfamily domain containing 8 (Mfsd8), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC132950; MGC132949; AI836898; 2810423E13Rik	MGC132950; MGC132949; AI836898; 2810423E13Rik
Mus musculus	MEEBO	ILMN_209744	ILMN_209744	PICALM	scl32408.23_56				32567787	NM_146194	Picalm		ILMN_2769656	005290360	S	3345	ATTTGGCGTGTGCCATGTTATGATCATGTACCTTTTCAATAAGGGGAGAT						An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes [goid 30118] [evidence IEA]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IMP]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which clathrin triskelia are assembled into the ordered structure known as a clathrin cage [goid 48268] [evidence IEA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]; Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence IEA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222546	ILMN_222546	NUDCD2	NM_026023.4	NM_026023.4		52653	133922574	NM_026023.4	Nudcd2	NP_080299.4	ILMN_2751228	004540424	S	1176	AGAGTTGTATACCCTTTGTCTAAATATGCTTGTCTGTTCACGGAAAGGAC	11	+	40553122-40553171	11qA5	Mus musculus NudC domain containing 2 (Nudcd2), mRNA.				D11Ertd603e; RP23-382C18.4; 2700047N05Rik	D11Ertd603e; RP23-382C18.4; 2700047N05Rik
Mus musculus	RefSeq	ILMN_219495	ILMN_219495	PAX7	NM_011039.2	NM_011039.2		18509	130502943	NM_011039.2	Pax7	NP_035169.1	ILMN_2709591	003710168	S	3944	TCAACAGTGAGGCGACATCGATTAGATGAGAGGCACCAGGCCTCTCCGCC	4	-	139294277-139294326	4qD3	Mus musculus paired box gene 7 (Pax7), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regrowth of muscle tissue to repair injured or damaged muscle fibers in the postnatal stage [goid 43403] [evidence IMP]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IGI]; The process whereby neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21527] [evidence IGI]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a satellite cell [goid 14813] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Pax-7	Pax-7
Mus musculus	RefSeq	ILMN_216601	ILMN_216601	ING2	NM_023503.2	NM_023503.2		69260	31542995	NM_023503.2	Ing2	NP_075992.2	ILMN_2673064	000160176	S	2443	TGGAGCTGTGACCATGTGTGGGAGCAGTTTTTGGTTATGGAGAGCAGCAG	8	-	48752851-48752900	8qB1.1	Mus musculus inhibitor of growth family, member 2 (Ing2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	Ing1l; P33ING2; 2810011M06Rik	Ing1l; P33ING2; 2810011M06Rik
Mus musculus	RefSeq	ILMN_200325	ILMN_200325	LOC386237	XM_359132.1	XM_359132.1			38081320	XM_359132.1	LOC386237		ILMN_1257830	005700221	S	54	GCCTGCAGGAAATTCCAGAAGCTGGAGAGAACCCAGAGAACCCAGATGTC										
Mus musculus	MEEBO	ILMN_192503	ILMN_192503	C130093G08RIK	scl30317.1.2_215						C130093G08Rik		ILMN_2488690	001820240	S	18	GACGTGCCAAAAGTATTTTTCCTTCCACACCGACAATGTGTCTACCATGG										
Mus musculus	RefSeq	ILMN_213317	ILMN_213317	CD22	NM_009845.2	NM_009845.2		12483	112807200	NM_009845.2	Cd22	NP_033975.2	ILMN_3159170	000940504	A	3702	CCCCAGGAAGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGC	7	-	31650986-31651035	7qB1	Mus musculus CD22 antigen (Cd22), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IPI]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [evidence TAS]	Lyb-8; A530093D23; Lyb8	Lyb-8; A530093D23; Lyb8
Mus musculus	RefSeq	ILMN_213317	ILMN_213317	CD22	NM_009845.2	NM_009845.2		12483	112807200	NM_009845.2	Cd22	NP_033975.2	ILMN_3079866	004920669	I	142	CAAGTAAATATGGAGTGGATATGGAGTGGCCTCTGTGTGCTGGCCTCGAG	7	-	31665170-31665219	7qB1	Mus musculus CD22 antigen (Cd22), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IPI]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence TAS]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [evidence TAS]	Lyb-8; A530093D23; Lyb8	Lyb-8; A530093D23; Lyb8
Mus musculus	Riken	ILMN_201919	ILMN_201919	TAF140	ri|4933439M23|PX00021L04|AK017128|1220					AK017128	TAF140		ILMN_2545625	005690035	S	497	GAGTGTTGGAAGGAGCGAGAGGAGCACAGAATAGGAGGTCACACTGGTCC										
Mus musculus	RefSeq	ILMN_217626	ILMN_217626	AKR1C21	NM_029901.2	NM_029901.2		77337	126090769	NM_029901.2	Akr1c21	NP_084177.2	ILMN_1223540	003360148	S	1111	CTTGCCACTTCTCTGTAGCAATTGAGAACTTCTTGAAGATAACAAAAAGA	13	+	4585691-4585740	13qA1	Mus musculus aldo-keto reductase family 1, member C21 (Akr1c21), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence ISA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the NADPH-dependent reduction of carbonyl compounds [goid 4033] [evidence ISA]	AI315367; 9430025F20Rik; MGC102401	AI315367; 9430025F20Rik; MGC102401
Mus musculus	RefSeq	ILMN_199046	ILMN_319897	GM1553	XM_001479767.1	XM_001479767.1		432480	149261063	XM_001479767.1	Gm1553	XP_001479817.1	ILMN_1243536	002030128	S	167	TAGGGCTTCAGAGGCAACAACATCATCTTCATCATTAGGGTCTGCAGTGG	10	-	81954959-81955008	10qC1	PREDICTED: Mus musculus gene model 1553, (NCBI) (Gm1553), mRNA.					
Mus musculus	MEEBO	ILMN_223334	ILMN_223334	1810027O10RIK	scl41358.1_245	XM_109683.4			38091439	XM_109683.4	1810027O10Rik		ILMN_1231718	001190180	S	416	CTGGGTAATTGGGCGCAGAGGGAAGGAGCCAATGTTGAAGCAGAAAAGAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]				
Mus musculus	RefSeq	ILMN_218079	ILMN_218079	TSPAN32	NM_020286.2	NM_020286.2		27027	34328257	NM_020286.2	Tspan32	NP_064682.1	ILMN_2852672	000830377	S	1506	AGGGACTTGGGAGATGCTGGACTGTGACAAGTTAGCTGAAGCCAGGACTC	7	+	150199699-150199748	7qF5	Mus musculus tetraspanin 32 (Tspan32), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Phemx; Art-1; Tssc6; D7Wsu37e; AW208513; BB235973	Phemx; Art-1; Tssc6; D7Wsu37e; AW208513; BB235973
Mus musculus	RefSeq	ILMN_222821	ILMN_222821	SYF2	NM_026780.1	NM_026780.1		68592	21312063	NM_026780.1	Syf2	NP_081056.1	ILMN_2956381	001230286	S	892	CACCTCCTCTGCCACATGCATATGTTCACATTTTTGTGCTTGGATAGACG	4	+	134209229-134209278	4qD3	Mus musculus SYF2 homolog, RNA splicing factor (S. cerevisiae) (Syf2), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	p29; 1110018L13Rik; Gcipip; mp29; Cbpin; D4Bwg1551e	p29; 1110018L13Rik; Gcipip; mp29; Cbpin; D4Bwg1551e
Mus musculus	RefSeq	ILMN_216681	ILMN_216681	FBXO3	NM_212433.1	NM_212433.1		57443	46877054	NM_212433.1	Fbxo3	NP_997598.1	ILMN_2673971	006400692	S	4414	ACAAGCCTCTGTAAACTACATTGCAAAAATTCTTATTCATGAAAGTGTTT	2	+	103903149-103903198	2qE2	Mus musculus F-box protein 3 (Fbxo3), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		1200002G09Rik; Fba; 1700026K02Rik; AI046358	1200002G09Rik; Fba; 1700026K02Rik; AI046358
Mus musculus	RefSeq	ILMN_216681	ILMN_216681	FBXO3	NM_212433.1	NM_212433.1		57443	46877054	NM_212433.1	Fbxo3	NP_997598.1	ILMN_1228298	000060762	S	1615	TCCAGACCTAGGCGCTACATGACACTACATTAGGCGTTGGATCGCTTTGC	2	+	103900350-103900399	2qE2	Mus musculus F-box protein 3 (Fbxo3), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		1200002G09Rik; Fba; 1700026K02Rik; AI046358	1200002G09Rik; Fba; 1700026K02Rik; AI046358
Mus musculus	RefSeq	ILMN_194038	ILMN_254719	UNC13D	NM_001009573.2	NM_001009573.2		70450	62243587	NM_001009573.2	Unc13d	NP_001009573.2	ILMN_2502798	001340092	S	3836	GGGTAGGCACAGATGGACAGCCGCAGAAAGGGAGTTTGGCTGTCTACAGA	11	-	115923491-115923540	11qE2	Mus musculus unc-13 homolog D (C. elegans) (Unc13d), mRNA.		Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IMP]; The formation of nodular inflammatory lesions, usually small or granular, firm, persistent, well-structured, and containing compactly grouped T lymphocytes and modified phagocytes such as epithelioid cells, giant cells, and other macrophages. Granuloma formation represents a chronic inflammatory response initiated by various infectious and noninfectious agents. The center of a granuloma consists of fused macrophages, which can become necrotic [goid 2432] [evidence IMP]; The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a natural killer cell [goid 43320] [evidence IMP]; The process by which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation [goid 2467] [evidence IMP]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IMP]		Munc13-4; FLJ00067; mFLJ00067; 2610108D09Rik; Jinx	Munc13-4; FLJ00067; mFLJ00067; 2610108D09Rik; Jinx
Mus musculus	RefSeq	ILMN_254719	ILMN_254719	UNC13D	NM_001009573.2	NM_001009573.2		70450	62243587	NM_001009573.2	Unc13d	NP_001009573.2	ILMN_2913913	002340484	S	3823	CTGGCAGGAAGCTGGGTAGGCACAGATGGACAGCCGCAGAAAGGGAGTTT	11	-	115923504-115923553	11qE2	Mus musculus unc-13 homolog D (C. elegans) (Unc13d), mRNA.		Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IMP]; The formation of nodular inflammatory lesions, usually small or granular, firm, persistent, well-structured, and containing compactly grouped T lymphocytes and modified phagocytes such as epithelioid cells, giant cells, and other macrophages. Granuloma formation represents a chronic inflammatory response initiated by various infectious and noninfectious agents. The center of a granuloma consists of fused macrophages, which can become necrotic [goid 2432] [evidence IMP]; The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a natural killer cell [goid 43320] [evidence IMP]; The process by which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation [goid 2467] [evidence IMP]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IMP]		Munc13-4; FLJ00067; mFLJ00067; 2610108D09Rik; Jinx	Munc13-4; FLJ00067; mFLJ00067; 2610108D09Rik; Jinx
Mus musculus	RefSeq	ILMN_243664	ILMN_243664	VPS35	NM_022997.2	NM_022997.2		65114	31981255	NM_022997.2	Vps35	NP_075373.1	ILMN_2844784	005550408	S	2396	GCGCTCAAGACGGGAATCACCAGAGTCTGAGGGGCCAATCTATGAAGGTC	8	-	88151221-88151234:88151235-88151270	8qC3	Mus musculus vacuolar protein sorting 35 (Vps35), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The posttranslational modification of proteins in the vacuole, including proteolytic cleavage of precursors to form active enzymes [goid 6624] [evidence ISA]		AI647796; Mem3	AI647796; Mem3
Mus musculus	RefSeq	ILMN_222783	ILMN_222783	CD84	NM_013489.1	NM_013489.1		12523	7304954	NM_013489.1	Cd84	NP_038517.1	ILMN_2754698	002450753	S	733	GCCGTGCTCTTTCTGCTTATTCTCATTCCGATGTTGGCATTTCTGTTCCG	1	+	173803483-173803532	1qH3	Mus musculus CD84 antigen (Cd84), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A130013D22Rik; SLAMF5; CDw84	A130013D22Rik; SLAMF5; CDw84
Mus musculus	Riken	ILMN_206438	ILMN_206438	C230067O06RIK	ri|C230067O06|PX00175K24|AK082600|2761					AK082600	C230067O06Rik		ILMN_1217928	003120255	S	1932	TGCCTTACAAACCAGCGTGCCTCATGGCCGTACACCCACACTCTAAGGCC										
Mus musculus	RefSeq	ILMN_212601	ILMN_212601	EG212225	NM_172504.2	NM_172504.2		212225	141802047	NM_172504.2	EG212225	NP_766092.1	ILMN_2628318	004200008	S	4292	AAAGTACCAGGACCAACGGCTCATCAAGCATCCCAGGATACAAAGAGCCT	1	-	46077242-46077291	1qC1.1	Mus musculus predicted gene, EG212225 (EG212225), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	4930509O22	4930509O22
Mus musculus	Riken	ILMN_204418	ILMN_204418	A230088G02RIK	ri|A230088G02|PX00129N11|AK039031|2278					AK039031	A230088G02Rik		ILMN_2564827	004390168	S	1479	TCCCTGAACCTTGAAAGGGAGGGTGTGATATCCCGTTTGGGGTCCCGGTG										
Mus musculus	RefSeq	ILMN_217311	ILMN_217311	KCNC3	NM_008422.1	NM_008422.1		16504	6680523	NM_008422.1	Kcnc3	NP_032448.1	ILMN_1220038	005960561	S	1888	GGCTGGACCCCAGGCACAAAGAGCCACAGAAACAGGATTCCACGTACAAG	7	+	44464451-44464500	7qB4	Mus musculus potassium voltage gated channel, Shaw-related subfamily, member 3 (Kcnc3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KShIIID; Kv3.3; Kcr2-3	KShIIID; Kv3.3; Kcr2-3
Mus musculus	RefSeq	ILMN_221777	ILMN_221777	SSPO	NM_173428.1	NM_173428.1		243369	30424660	NM_173428.1	Sspo	NP_775604.1	ILMN_3005509	005050386	S	14887	CGGATCTTGAACCTCCTTTGCCCCGATGGCCACACAGAGCCAGTGGTGTT	6	+	48450432-48450481	6qB2.3	Mus musculus SCO-spondin (Sspo), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	Scospondin; C79529	Scospondin; C79529
Mus musculus	RefSeq	ILMN_256788	ILMN_256788	OLFR228	NM_146405.2	NM_146405.2		258400	116174771	NM_146405.2	Olfr228	NP_666517.2	ILMN_2818216	006860382	S	789	GTCCAGTGACTCCTTAAAAACTGACAAGGTGGCTTCTATCTTTTATGCCC	2	-	86323059-86323108	2qD	Mus musculus olfactory receptor 228 (Olfr228), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr228-ps1; MOR189-3	Olfr228-ps1; MOR189-3
Mus musculus	RefSeq	ILMN_223227	ILMN_256788	OLFR228	NM_146405.2	NM_146405.2		258400	116174771	NM_146405.2	Olfr228	NP_666517.2	ILMN_1250275	005810358	S	576	AAAAGAAAATGAAATGATAACTTTTATTTTATCAATTATTAACTTGATTA	2	-	86323272-86323321	2qD	Mus musculus olfactory receptor 228 (Olfr228), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr228-ps1; MOR189-3	Olfr228-ps1; MOR189-3
Mus musculus	RefSeq	ILMN_193838	ILMN_243310	CHAT	NM_009891.2	NM_009891.2		12647	141802071	NM_009891.2	Chat	NP_034021.1	ILMN_2656864	002260685	S	2123	TGGAGTTTGCAGAAGCGGTGGGAGCGAGCCTTGTTGACATGAGAGACCTC	14	-	33222026-33222075	14qB	Mus musculus choline acetyltransferase (Chat), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The specific actions or reactions of an organism that recur with measured regularity [goid 7622] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IMP]; The biological process by which a synapse between a motor neuron and a muscle is initially formed [goid 7529] [evidence IMP]; Any process involved in the generation of rhythmic, synchronous excitatory synaptic inputs in a neural circuit [goid 43179] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + choline = CoA + O-acetylcholine [goid 4102] [evidence IMP]	B230380D24Rik	B230380D24Rik
Mus musculus	Riken	ILMN_204123	ILMN_204123	DMD	ri|B130052E04|PX00158G22|AK045257|1794					AK045257	Dmd		ILMN_1254679	006290201	S	1500	TGGGCTTGGTGAAGCACATCATTTAAGCCTAGCACTCGGAAGCAGGCAGA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with the enzyme nitric-oxide synthase [goid 50998] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216107	ILMN_216107	HDLBP	NM_133808.2	NM_133808.2		110611	31542951	NM_133808.2	Hdlbp	NP_598569.1	ILMN_2795359	003840403	S	6101	CCATGTCCTATGTTTCCATAGCTACATCCATCCCTTGGCCTTAACTTTGG	1	-	95236433-95236482	1qD	Mus musculus high density lipoprotein (HDL) binding protein (Hdlbp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	1110005P14Rik; D1Ertd101e; AA960365; AI118566	1110005P14Rik; D1Ertd101e; AA960365; AI118566
Mus musculus	MEEBO	ILMN_224140	ILMN_224140	EI24	scl36033.13_6				6681288	NM_007915	Ei24		ILMN_2775512	003520731	S	1565	AAGGGGCATTCCAGTTGCTCCAGTCACTCCCTCTATAGCCATCACTGTCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_219424	ILMN_331520	SPATA5L1	XM_001481333.1	XM_001481333.1		214616	149249608	XM_001481333.1	Spata5l1	XP_001481383.1	ILMN_1246870	004260326	S	1216	TGATTTAGGTCTCCTGGCAGAAATGACGGTTGGCTATGTTGGTGCTGACC				2qE5	PREDICTED: Mus musculus spermatogenesis associated 5-like 1 (Spata5l1), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209957	ILMN_209957	PDZD11	NM_028303.3	NM_028303.3		72621	146141191	NM_028303.3	Pdzd11	NP_082579.1	ILMN_1259379	004210653	S	347	CGGATGCACATCGAGCAGGACTTCAAGAAGGGGACCAAGTTCTAGCTGTG				XqC3	Mus musculus PDZ domain containing 11 (Pdzd11), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI854765; 2310079D11Rik; Pdzk11; 1810012H22Rik; 2700099C19Rik	AI854765; 2310079D11Rik; Pdzk11; 1810012H22Rik; 2700099C19Rik
Mus musculus	Riken	ILMN_206567	ILMN_206567	6030436C20RIK	ri|6030436C20|PX00056P20|AK077910|1208					AK077910	6030436C20Rik		ILMN_1241870	004760719	S	1069	CTTGCAGAGAACCTGGGTTTGATTCCCAGCATATACAACAGTTCACAACC										
Mus musculus	RefSeq	ILMN_212203	ILMN_241711	SEMA6B	XM_001004114.1	XM_001004114.1		20359	94402986	XM_001004114.1	Sema6b	XP_001004114.1	ILMN_2769285	001470431	S	2841	GGCCAGCTGAGTCCAGGACCCTCTCCAGCCCTATCCCCATCAATAAAACT				17qD	PREDICTED: Mus musculus sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B (Sema6b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]			
Mus musculus	RefSeq	ILMN_218371	ILMN_218371	SYT2	NM_009307.3	NM_009307.3		20980	141801663	NM_009307.3	Syt2	NP_033333.2	ILMN_1248279	002630022	S	2630	CCCTTTTTGTGTAAGTGGAAAAATACCATCTGAAGACAAGTGCTTTGCAC	1	+	136645238-136645287	1qE4	Mus musculus synaptotagmin II (Syt2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized [goid 42598] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IDA]	syt II; KIAA4194; R74640; mKIAA4194	syt II; KIAA4194; R74640; mKIAA4194
Mus musculus	Riken	ILMN_206052	ILMN_206052	D230050M15RIK	ri|D230050M15|PX00189J22|AK052144|3251					AK052144	D230050M15Rik		ILMN_2577194	003870367	S	3121	CAAACATGGCCAGGTAGATAAACTTGCTCAGGGAGGTTGTATCTGGGGCC										
Mus musculus	MEEBO	ILMN_194203	ILMN_194203	IEREPO2	scl0081842.1_155						Ierepo2		ILMN_2504340	002850647	S	11	TGTTCTCATTGCTGGCTTCTCCCCTCGCAAGCTGCCCTCTCTCAGGGTGC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_223345	ILMN_223345	VSIG2	NM_020518.2	NM_020518.2		57276	114145510	NM_020518.2	Vsig2	NP_065264.2	ILMN_2762841	003990593	S	230	CAAAGGGTAAGACGGCCGAGCTGAGCTGCAGTTACAAAACATCGGTGGGC	9	+	37347499-37347548	9qA4	Mus musculus V-set and immunoglobulin domain containing 2 (Vsig2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC117653; 2210413P10Rik; 1190004B15Rik; CTX; Ctm; AU040484	MGC117653; 2210413P10Rik; 1190004B15Rik; CTX; Ctm; AU040484
Mus musculus	RefSeq	ILMN_223345	ILMN_223345	VSIG2	NM_020518.2	NM_020518.2		57276	114145510	NM_020518.2	Vsig2	NP_065264.2	ILMN_1245518	005270347	S	975	GGAGGATGCAACCGCTCCTGGGGTTTTTGAGCAAGCTTCTATGAGAGCCG	9	+	37351595-37351644	9qA4	Mus musculus V-set and immunoglobulin domain containing 2 (Vsig2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC117653; 2210413P10Rik; 1190004B15Rik; CTX; Ctm; AU040484	MGC117653; 2210413P10Rik; 1190004B15Rik; CTX; Ctm; AU040484
Mus musculus	Riken	ILMN_204546	ILMN_204546	EIF2AK3	ri|B230374M04|PX00161N20|AK046355|1064					AK046355	Eif2ak3		ILMN_1224408	001710471	S	891	GGGGATGCTGGTTAAATGGACAGTTTTCTAGGCTCCGCCCCGGTTTTACT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IGI]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IMP]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The process of apoptosis in cells infected with a virus [goid 6926] [evidence IMP]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of protein binding [goid 32092] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IMP]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IMP]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IMP]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons [goid 31642] [evidence IMP]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IMP]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215989	ILMN_215989	TACR2	NM_009314.2	NM_009314.2		21337	31981974	NM_009314.2	Tacr2	NP_033340.2	ILMN_3140639	003190338	A	1640	CCCACACAGAAGGAAAGAACCAACGTCTGCAAGCTGTCCCCTGACCTCCC	10	+	61661047-61661096	10qB4	Mus musculus tachykinin receptor 2 (Tacr2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with tachykinin to initiate a change in cell activity [goid 4995] [evidence IEA]	MGC129144; Tac2r; MGC129145	MGC129144; Tac2r; MGC129145
Mus musculus	Riken	ILMN_202354	ILMN_202354	4930500M09RIK	ri|4930500M09|PX00032F22|AK015669|700					AK015669	4930500M09Rik		ILMN_2548965	006480390	S	550	CACTCGGACCCAGCCGGAAGTGGGGGAAAGCCAATCCTAGAGGCTGAAGG								Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215765	ILMN_215765	PRPH2	NM_008938.1	NM_008938.1		19133	7110698	NM_008938.1	Prph2	NP_032964.1	ILMN_1241602	005310324	S	2432	GGCCCCAATGTTGGTTAGTATTCTGAGTCTCTCAGAGCAAGAAATGGCCC	17	+	47061675-47061724	17qC	Mus musculus peripherin 2 (Prph2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rd-2; PRPH; AVMD; Tspan22; Rds; AOFMD; RP7; Rd2	Rd-2; PRPH; AVMD; Tspan22; Rds; AOFMD; RP7; Rd2
Mus musculus	MEEBO	ILMN_188911	ILMN_188911	SCL0004085.1_27	scl0004085.1_27	AK021284.1			12862128	AK021284.1	scl0004085.1_27		ILMN_2456769	002630112	S	20	GATCGAGCCTGCGTTCGGGAGCGGCAGCAGAGGGGGCATAGACACTCGGA										
Mus musculus	Riken	ILMN_205066	ILMN_205066	HEGFL	ri|D230044K20|PX00190I11|AK052084|2891					AK052084	Hegfl		ILMN_2569725	002190593	S	2459	ATGGAGCTCGTGGGAGATCACAGAGAGAGGGTAGAAAGCCGGCAGAGCCA										
Mus musculus	RefSeq	ILMN_221223	ILMN_221223	2810432D09RIK	NM_027278.1	NM_027278.1		69961	21312503	NM_027278.1	2810432D09Rik	NP_081554.1	ILMN_2974601	001940368	S	564	GGACACCCGGTCCTGAAGATCTGCTGCGCCTGACTGTTCTCTAGACCTGA	4	-	41659279-41659313:41659314-41659328	4qA5	Mus musculus RIKEN cDNA 2810432D09 gene (2810432D09Rik), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AW987258	AW987258
Mus musculus	RefSeq	ILMN_210101	ILMN_210101	HNRPU	NM_016805.1	NM_016805.1		51810	7949050	NM_016805.1	Hnrpu	NP_058085.1	ILMN_1259775	003360619	S	2411	GAGGGAACTATAACCAGAACTTCAGAGGGCGAGGAAATAATCGTGGCTAC	1	-	180260028-180260070:180260296-180260302	1qH4	Mus musculus heterogeneous nuclear ribonucleoprotein U (Hnrpu), mRNA.				hnRNP U; AW557595; AI256620; AL024437; AA408410; hnRNPU; AL024194; SAFA; Sp120; C86794	hnRNP U; AW557595; AI256620; AL024437; AA408410; hnRNPU; AL024194; SAFA; Sp120; C86794
Mus musculus	MEEBO	ILMN_192396	ILMN_192396	2900060B14RIK	scl16395.1.2_32						2900060B14Rik		ILMN_1253544	006110180	S	20	CAGTACTGCTAACGCCTGACAACACACCTGCATCGGTTAGAGCTCTGCTT										
Mus musculus	MEEBO	ILMN_187656	ILMN_187656	TRIM35	scl0066854.2_74	NM_029979.1			21362274	NM_029979.1	Trim35		ILMN_2445989	006560661	S	8	CTGAGCGCCACTGCCATCTGTATACCTTCCATGCCCACTTTGGGGAGGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_201864	ILMN_201864	3930402I10RIK	ri|3930402I10|PX00010B17|AK014461|1732					AK014461	3930402I10Rik		ILMN_2545184	002260242	S	1531	CAGCCTTATTCAAGGTGGGCCTTCCCCATTCAGTTGCATATACACATCCC										
Mus musculus	MEEBO	ILMN_185394	ILMN_185394	GOLGA3	scl27443.23_242				31982329	NM_008146	Golga3		ILMN_1252923	001110242	S	15	GCTAGCTCTCTACTTAACACTAAAAACAAAGACAAATTCCAAGCAAGATC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_185394	ILMN_185394	GOLGA3	scl27443.23_242				31982329	NM_008146	Golga3		ILMN_2437867	006940129	S	10	CCCGAGTCTCATCCTAACATGCTCAGTAGTTGGGCATTCTAGCCCAGTCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_188847	ILMN_188847	AI551093	scl0106919.1_30						AI551093		ILMN_2456278	003990241	S	4	CAACGTGTGCTCTGTACAAGTGCAGCCATGTGGAATACACTGGATTTTAC										
Mus musculus	RefSeq	ILMN_223638	ILMN_223638	2510049I19RIK	NM_026455.2	NM_026455.2		67922	31980931	NM_026455.2	2510049I19Rik	NP_080731.1	ILMN_2778799	000270719	S	1631	GTTTGACTTGGAGCGGGGTTGGAGACATGGGGTTGGCTGTCCTGAAACAC	8	+	75152474-75152523	8qB3.3	Mus musculus RIKEN cDNA 2510049I19 gene (2510049I19Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW822030	AW822030
Mus musculus	RefSeq	ILMN_223638	ILMN_223638	2510049I19RIK	NM_026455.2	NM_026455.2		67922	31980931	NM_026455.2	2510049I19Rik	NP_080731.1	ILMN_1223730	002070706	S	1504	GTGCACATAGCCTAAAGTCATATTAATTTTTTTCTGTCTTCGAACATAGC	8	+	75152347-75152396	8qB3.3	Mus musculus RIKEN cDNA 2510049I19 gene (2510049I19Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW822030	AW822030
Mus musculus	RefSeq	ILMN_189603	ILMN_233934	LOC640340	XM_001006032.1	XM_001006032.1		640340	94420422	XM_001006032.1	LOC640340	XP_001006032.1	ILMN_2462709	007650193	S	33	GCTGCTATGGGTGTCTGGTGCTTGTGGGGAAATTGTGTTGACCCAGTCTA				6qC1	PREDICTED: Mus musculus similar to Ig kappa chain V-IV region B17 precursor (LOC640340), mRNA.					
Mus musculus	RefSeq	ILMN_212104	ILMN_212104	KCNQ3	NM_152923.1	NM_152923.1		110862	23097332	NM_152923.1	Kcnq3	NP_690887.1	ILMN_2622771	004570546	S	2466	TGGGGGATCGAGCTGGATGAGGGAAAAGCGGTACCTGGCTGAAGGAGAAA	15	-	65826839-65826888	15qD1-qD2	Mus musculus potassium voltage-gated channel, subfamily Q, member 3 (Kcnq3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218976	ILMN_218976	OLFR847	NM_146525.1	NM_146525.1		258518	33239265	NM_146525.1	Olfr847	NP_666736.1	ILMN_2702652	007000608	S	758	GTGCAGCAGTGGGAGTATACATCTGTTCTGCAATTACTGTTTCCCCTCAG	9	-	19179516-19179565	9qA2	Mus musculus olfactory receptor 847 (Olfr847), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR149-2	MOR149-2
Mus musculus	MEEBO	ILMN_212534	ILMN_212534	MFGE8	scl31155.10_11				6678869	NM_008594	Mfge8		ILMN_2771034	002120286	S	1904	TTATCTCCTGAGACGCCTCTTGACCCTTGCACTGGAGCCTCAGTTGACAA						Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence IDA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]; Interacting selectively with phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine [goid 8429] [evidence IDA]; Interacting selectively with phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 1786] [evidence IDA]		
Mus musculus	RefSeq	ILMN_240594	ILMN_240594	AB182283	NM_001081652.1	NM_001081652.1		192950	126116573	NM_001081652.1	AB182283	NP_001075121.1	ILMN_2891085	006650044	S	4801	ATCATGGAACTGACAATGTAGCTGCTGACTGGAAGCAGGGGCGTCCTGCC	11	-	6497868-6497897:6497898-6497912:6498008-6498012	11qA1	Mus musculus cDNA sequence AB182283 (AB182283), mRNA.				mKIAA0363; KIAA0363; D230024G13Rik	mKIAA0363; KIAA0363; D230024G13Rik
Mus musculus	RefSeq	ILMN_199118	ILMN_240594	AB182283	NM_001081652.1	NM_001081652.1		192950	126116573	NM_001081652.1	AB182283	NP_001075121.1	ILMN_1236960	001740630	S	4637	CCCGTGTGAGGCCAGAGTGTGAGGAGCAAGAGGAGGAAGATGAGGAGGTA	11	-	6498127-6498130:6498272-6498317	11qA1	Mus musculus cDNA sequence AB182283 (AB182283), mRNA.				mKIAA0363; KIAA0363; D230024G13Rik	mKIAA0363; KIAA0363; D230024G13Rik
Mus musculus	RefSeq	ILMN_211164	ILMN_211164	INO80C	NM_172625.2	NM_172625.2		225280	142364013	NM_172625.2	Ino80c	NP_766213.1	ILMN_2650868	005090523	S	325	ACCTGGAAGAACCTCAAACAGATCCTCGCTGCTGAAAGGGCGTTGCCATG	18	-	24271181-24271230	18qA2	Mus musculus INO80 complex subunit C (Ino80c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_211164	ILMN_211164	INO80C	NM_172625.2	NM_172625.2		225280	142364013	NM_172625.2	Ino80c	NP_766213.1	ILMN_2754015	001510433	S	189	CATGAATGAGAGTAAAATGGCGTCCTCGGAGTTAAGCTCGGGGCCTGTGG	18	-	24272621-24272670	18qA2	Mus musculus INO80 complex subunit C (Ino80c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_211164	ILMN_211164	INO80C	NM_172625.2	NM_172625.2		225280	142364013	NM_172625.2	Ino80c	NP_766213.1	ILMN_2613182	004850184	S	2292	CTAAGACGCTCCTCACACCAGTCTACTCTGTATGTGTTTGAATATCTCTG	18	-	24263280-24263329	18qA2	Mus musculus INO80 complex subunit C (Ino80c), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_189429	ILMN_189429	ZFP354C	NM_013922.4	NM_013922.4		30944	113681198	NM_013922.4	Zfp354c	NP_038950.3	ILMN_2461182	006420026	S	1977	GTCATGGACAGTGGATGCACAAAGAATGCTGACATCAGCAATTTAAGGAC	11	-	50627927-50627976	11qB1.3	Mus musculus zinc finger protein 354C (Zfp354c), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	mKIAA4218; Kid3; KIAA4218; Tcf17l2; AJ18; 5330421P20Rik; AW743325	mKIAA4218; Kid3; KIAA4218; Tcf17l2; AJ18; 5330421P20Rik; AW743325
Mus musculus	RefSeq	ILMN_210830	ILMN_220499	FAHD2A	NM_029629.1	NM_029629.1		68126	29366813	NM_029629.1	Fahd2a	NP_083905.1	ILMN_1245115	004150692	S	439	GGGCTTGAATTATGCAGACCACTGCCAAGAACAGAATGTGCGGGTGCCCA	2	-	127266190-127266239	2qF1	Mus musculus fumarylacetoacetate hydrolase domain containing 2A (Fahd2a), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Cgi-105; 1500003K14Rik; B430104H02Rik	Cgi-105; 1500003K14Rik; B430104H02Rik
Mus musculus	RefSeq	ILMN_220499	ILMN_220499	FAHD2A	NM_029629.1	NM_029629.1		68126	29366813	NM_029629.1	Fahd2a	NP_083905.1	ILMN_2882425	003180446	S	748	CCCCCTGGGCCCTGCCTTGGTTACCAAGGATACCATAGCAGATCCACACA	2	-	127262561-127262581:127263849-127263877	2qF1	Mus musculus fumarylacetoacetate hydrolase domain containing 2A (Fahd2a), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Cgi-105; 1500003K14Rik; B430104H02Rik	Cgi-105; 1500003K14Rik; B430104H02Rik
Mus musculus	RefSeq	ILMN_220499	ILMN_220499	FAHD2A	NM_029629.1	NM_029629.1		68126	29366813	NM_029629.1	Fahd2a	NP_083905.1	ILMN_1214593	005290270	S	148	GCAGGTTCAGAAGAGGCCCTGTCAACCCTCCAGAAACATGAGACTGGTAC	2	-	127267752-127267801	2qF1	Mus musculus fumarylacetoacetate hydrolase domain containing 2A (Fahd2a), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Cgi-105; 1500003K14Rik; B430104H02Rik	Cgi-105; 1500003K14Rik; B430104H02Rik
Mus musculus	RefSeq	ILMN_210830	ILMN_220499	FAHD2A	NM_029629.1	NM_029629.1		68126	29366813	NM_029629.1	Fahd2a	NP_083905.1	ILMN_2701855	005870176	S	918	GGGACCTCCTCCTGACTGGGACGCCTCCAGGTGTTGGCATGTTTAGGAAG	2	-	127262288-127262337	2qF1	Mus musculus fumarylacetoacetate hydrolase domain containing 2A (Fahd2a), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Cgi-105; 1500003K14Rik; B430104H02Rik	Cgi-105; 1500003K14Rik; B430104H02Rik
Mus musculus	MEEBO	ILMN_222324	ILMN_222324	4930415J05RIK	scl33102.9.1_233	NM_177061.2			31342714	NM_177061.2	4930415J05Rik		ILMN_2748047	007200609	S	4307	GGTGTCTGAATATTACAGAATATCTGTGCATCTCTAAATCTGCAGTGAGG										
Mus musculus	RefSeq	ILMN_204831	ILMN_227371	ETNK1	XM_979562.2	XM_979562.2		75320	149255964	XM_979562.2	Etnk1	XP_984656.2	ILMN_2567940	004070102	S	3057	ATCCTAAGATTGTCTGGTGTTCCACATGACTTATGTTCTCAGCCAAGTGC				6qG3	PREDICTED: Mus musculus ethanolamine kinase 1 (Etnk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + ethanolamine = ADP + O-phosphoethanolamine [goid 4305] [evidence IEA]		
Mus musculus	RefSeq	ILMN_203509	ILMN_227371	ETNK1	XM_979562.2	XM_979562.2		75320	149255964	XM_979562.2	Etnk1	XP_984656.2	ILMN_1244439	004250192	S	4427	GTCATTAGGCTGGGAACCGAGCAGTAAGATAGCAGGAACTGGAAGGAAGG				6qG3	PREDICTED: Mus musculus ethanolamine kinase 1 (Etnk1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + ethanolamine = ADP + O-phosphoethanolamine [goid 4305] [evidence IEA]		
Mus musculus	RefSeq	ILMN_205430	ILMN_255173	RTN3	NM_001003934.1	NM_001003934.1		20168	54607015	NM_001003934.1	Rtn3	NP_001003934.1	ILMN_2572492	007000241	S	1792	GTCTGGAAGGTGAGGTGGCTTCACAAGTACCTAATACCCTGAATGAAGTC	19	-	7531480-7531529	19qA	Mus musculus reticulon 3 (Rtn3), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW558451; RTN3-A1; MGC105197	AW558451; RTN3-A1; MGC105197
Mus musculus	RefSeq	ILMN_206537	ILMN_255173	RTN3	NM_001003934.1	NM_001003934.1		20168	54607015	NM_001003934.1	Rtn3	NP_001003934.1	ILMN_1248410	003610050	S	3406	GAAGTGTCTCTAGGGTCCTCTCTCCAGTTCCAAGGACTCGTATACAGCTC	19	-	7501965-7502014	19qA	Mus musculus reticulon 3 (Rtn3), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW558451; RTN3-A1; MGC105197	AW558451; RTN3-A1; MGC105197
Mus musculus	RefSeq	ILMN_217719	ILMN_217719	AYTL2	NM_145376.3	NM_145376.3		210992	31560845	NM_145376.3	Aytl2	NP_663351.2	ILMN_2995575	003930195	S	3339	GCCACTAAAAGGCCAATGAAGGAGACAGATGAACTGAGATGTCCCGAGGC	13	+	73982117-73982166	13qC1	Mus musculus acyltransferase like 2 (Aytl2), mRNA.				MGC8148; C87117; BB137372; 2900035H07Rik; LPCAT; BC005662	MGC8148; C87117; BB137372; 2900035H07Rik; LPCAT; BC005662
Mus musculus	RefSeq	ILMN_193194	ILMN_258586	SLC25A46	NM_026165.3	NM_026165.3		67453	141802282	NM_026165.3	Slc25a46	NP_080441.1	ILMN_2673344	006400121	S	4104	TTTCTGCGTTCTCTTCAAGTATTTGGCATAATACATATCACTTCCCTGCC	18	-	31740039-31740088	18qB1	Mus musculus solute carrier family 25, member 46 (Slc25a46), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI325987; 1200007B05Rik	AI325987; 1200007B05Rik
Mus musculus	MEEBO	ILMN_189475	ILMN_189475	1700021K10RIK	scl34791.3.1_58						1700021K10Rik		ILMN_2461601	007160386	S	9	GGGTGAGCTGTACTCTTTGGTGCAATTCTCTGACTAAGAGTGGGTTAAGC										
Mus musculus	MEEBO	ILMN_192115	ILMN_192115	A930040G15RIK	scl30091.17_420				46048306	NM_133922	A930040G15Rik		ILMN_2727841	006760600	S	1990	CGTCCTGGAGAAGTGCCCAGCAGGAGTCTGCATCAAGACAGTCCACAGAC										
Mus musculus	RefSeq	ILMN_193710	ILMN_233603	SUMO1	NM_009460.2	NM_009460.2		22218	124244086	NM_009460.2	Sumo1	NP_033486.1	ILMN_2632942	004060433	S	29	CCTGCAGCCGCGGTGTTGTGCTGTAGAGAAGGGACGGATTTGTAAACCTC	1	-	59727600-59727649	1qC1.3	Mus musculus SMT3 suppressor of mif two 3 homolog 1 (yeast) (Sumo1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	Ubl1; SUSP4; SMTP3; SMT3H3; Smt3C; SMT3; PIC1; SENTRIN; SUMO-1; GMP1; MGC103203	Ubl1; SUSP4; SMTP3; SMT3H3; Smt3C; SMT3; PIC1; SENTRIN; SUMO-1; GMP1; MGC103203
Mus musculus	RefSeq	ILMN_193710	ILMN_233603	SUMO1	NM_009460.2	NM_009460.2		22218	124244086	NM_009460.2	Sumo1	NP_033486.1	ILMN_2704509	001980288	S	1140	GGCCTGGGACATGGGTTTTCAAGGGACATCGTCTGTACCAGCTTCATTAA	1	-	59696303-59696352	1qC1.3	Mus musculus SMT3 suppressor of mif two 3 homolog 1 (yeast) (Sumo1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	Ubl1; SUSP4; SMTP3; SMT3H3; Smt3C; SMT3; PIC1; SENTRIN; SUMO-1; GMP1; MGC103203	Ubl1; SUSP4; SMTP3; SMT3H3; Smt3C; SMT3; PIC1; SENTRIN; SUMO-1; GMP1; MGC103203
Mus musculus	RefSeq	ILMN_262075	ILMN_262075	SKIL	NM_001039090.1	NM_001039090.1		20482	84875519	NM_001039090.1	Skil	NP_001034179.1	ILMN_3126697	003800274	A	6192	CCTCAGTTTCTAACCTGTGAAGGCAGTAAGTGAATGGTCCCTTCTGCAAC	3	+	31021112-31021161	3qA3	Mus musculus SKI-like (Skil), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SnoN2; sno; 9130011J04Rik; sno-dE3; Skir; SnoN	SnoN2; sno; 9130011J04Rik; sno-dE3; Skir; SnoN
Mus musculus	MEEBO	ILMN_188621	ILMN_188621	IGK-V	scl0016080.1_17				51711946	XM_485751	Igk-V		ILMN_2454248	004060743	S	2	CCAGTTCCTGTTTCTGGTAGTGCTCTCGATTCAGGAGATCAACGGTGATG										
Mus musculus	RefSeq	ILMN_214428	ILMN_214428	FCGR2B	NM_010187.2	NM_010187.2		14130	116063577	NM_010187.2	Fcgr2b	NP_034317.1	ILMN_1228657	001110326	S	878	CACCTACTCACTTCTCAAGCATCCCGAAGCCCTGGATGAAGAAACAGAGC	1	-	172891167-172891216	1qH3	Mus musculus Fc receptor, IgG, low affinity IIb (Fcgr2b), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IC ]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IDA]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50777] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]; Any process that stops, prevents, or reduces the rate of type I hypersensitivity, a type of inflammatory response [goid 1811] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus [goid 2862] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5057] [evidence TAS]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IDA]	Fc[g]RII; Fcgr2; Ly-17; LyM-1; Fcr-2; F630109E10Rik; AI528646; Fcr-3; Fcgr2a; FcgRII; CD32; Ly-m20	Fc[g]RII; Fcgr2; Ly-17; LyM-1; Fcr-2; F630109E10Rik; AI528646; Fcr-3; Fcgr2a; FcgRII; CD32; Ly-m20
Mus musculus	RefSeq	ILMN_186987	ILMN_238195	2310028O11RIK	XM_901483.3	XM_901483.3		433771	149253180	XM_901483.3	2310028O11Rik	XP_906576.1	ILMN_2440183	007160291	S	2309	GCAGTCCCACAACCCTGCTGTAGGAAACAGACACTGGGCTAAGAAGGGAG	4	-	138657908-138657957	4qD3	PREDICTED: Mus musculus RIKEN cDNA 2310028O11 gene, transcript variant 3 (2310028O11Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_210833	ILMN_210833	MRPS25	scl0001042.1_14	NM_025578.2			31981256	NM_025578.2	Mrps25		ILMN_1239113	003130021	S	1120	CTTCCTTGCCATCAAGTCCATGTGGTGGAGGAGTGCCAGTGGCATTGTGT						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]		The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]		
Mus musculus	RefSeq	ILMN_184219	ILMN_184219	TXNDC17	NM_026559.3	NM_026559.3		52700	141801882	NM_026559.3	Txndc17	NP_080835.1	ILMN_1228991	000450164	S	305	GACCCAAATAATGACTTCAGACAAAAACTGAAAATAACCGCAGTGCCTAC	11	+	72022239-72022288	11qB4	Mus musculus thioredoxin domain containing 17 (Txndc17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		4831443O22Rik; TRP14; RP23-207N15.4; D11Ertd672e	4831443O22Rik; TRP14; RP23-207N15.4; D11Ertd672e
Mus musculus	RefSeq	ILMN_184219	ILMN_184219	TXNDC17	NM_026559.3	NM_026559.3		52700	141801882	NM_026559.3	Txndc17	NP_080835.1	ILMN_1259178	000020152	S	865	CTGCAGCAATTAGTATCTATTACCTTAAGTTCTGTGTATTTGCAAAACCC	11	+	72023408-72023457	11qB4	Mus musculus thioredoxin domain containing 17 (Txndc17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		4831443O22Rik; TRP14; RP23-207N15.4; D11Ertd672e	4831443O22Rik; TRP14; RP23-207N15.4; D11Ertd672e
Mus musculus	RefSeq	ILMN_211217	ILMN_211217	1700025E21RIK	NM_029373.3	NM_029373.3		75647	146141217	NM_029373.3	1700025E21Rik	NP_083649.1	ILMN_2613687	006900703	S	573	CCTGCCAATATTAAGAGGAGGAAGTCAGTGTCCAGGCAAAGGGATATGGA				6qA3.3	Mus musculus RIKEN cDNA 1700025E21 gene (1700025E21Rik), mRNA.				1700016K02Rik	1700016K02Rik
Mus musculus	Riken	ILMN_203847	ILMN_203847	GIG2	ri|A530090O15|PX00143F07|AK041212|3081					AK041212	GIG2		ILMN_1226594	007200193	S	2967	GGCCCCTGTAGTCTTCACATCTATCAGCCACGCACGTTTGTTCACCTAAC										
Mus musculus	RefSeq	ILMN_215952	ILMN_215952	1700010I14RIK	NM_025851.2	NM_025851.2		66931	142384085	NM_025851.2	1700010I14Rik	NP_080127.1	ILMN_2665591	000610220	S	1583	ATATGCAGTTCATCTTTTATTCTGTAACTTTGAACTGGACAAAACAGGTT	17	+	9201026-9201075	17qA1	Mus musculus RIKEN cDNA 1700010I14 gene (1700010I14Rik), mRNA.					
Mus musculus	RefSeq	ILMN_212830	ILMN_212830	DISC1	NM_174854.2	NM_174854.2		244667	119874420	NM_174854.2	Disc1	NP_777279.2	ILMN_2630830	004060537	S	1835	AGCCAAGGAGCTCACGGAGGAGATTTGGGCCTTGTCGTCAGAGCGGGAAG	8	+	127688909-127688958	8qE2	Mus musculus disrupted in schizophrenia 1 (Disc1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_212830	ILMN_212830	DISC1	NM_174854.2	NM_174854.2		244667	119874420	NM_174854.2	Disc1	NP_777279.2	ILMN_1252547	001240010	S	2538	GCAGGAGAGGCCTCAGCTTCCTATCCGACAGCTGGTGCTCAGGAAACCGA	8	+	127784992-127785041	8qE2	Mus musculus disrupted in schizophrenia 1 (Disc1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_212830	ILMN_212830	DISC1	NM_174854.2	NM_174854.2		244667	119874420	NM_174854.2	Disc1	NP_777279.2	ILMN_3030519	002030433	I	1821	AGCTGCTTCTCCACAGCCAAGGAGCTCACGGAGGAGATTTGGGCCTTGTC	8	+	127688895-127688944	8qE2	Mus musculus disrupted in schizophrenia 1 (Disc1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_220545	ILMN_220545	NSMCE1	NM_026330.2	NM_026330.2		67711	34328290	NM_026330.2	Nsmce1	NP_080606.2	ILMN_1248637	006760053	S	934	AGCTGTGTCCTGCATCGTTCTGGGCTGACCCTCACAGTCCATTTAGGACT	7	-	132611229-132611277:132611278-132611278	7qF3	Mus musculus non-SMC element 1 homolog (S. cerevisiae) (Nsmce1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2510027N19Rik	2510027N19Rik
Mus musculus	MEEBO	ILMN_192495	ILMN_192495	4931405B09RIK	scl070939.2_1						4931405B09Rik		ILMN_1244197	007510471	S	3	CCAGCCCAGTCTGGCTTGTAGTGCCAACACTTAGAGCCCGGATTCCTTCT										
Mus musculus	RefSeq	ILMN_217075	ILMN_217075	BATF2	NM_028967.1	NM_028967.1		74481	28077032	NM_028967.1	Batf2	NP_083243.1	ILMN_1230143	007160246	S	1222	CACAGCACCCCCCAAGTGCCTCCAGTTCTTCACCAGGTTTTCACACACAG	19	+	6172326-6172375	19qA	Mus musculus basic leucine zipper transcription factor, ATF-like 2 (Batf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	4933430F08Rik	4933430F08Rik
Mus musculus	Riken	ILMN_201717	ILMN_201717	MRPL15	ri|2410012M03|ZX00041J21|AK010474|983					AK010474	Mrpl15		ILMN_1233595	006130735	S	1	ACGCGGGTCATGGCTGGCACGGCGCGCGGCTGCGGGACCAGCCTGGACCT						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISA]; The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome [goid 2] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISA]		
Mus musculus	Riken	ILMN_207084	ILMN_207084	PRLR	ri|C130066B13|PX00666F05|AK081676|1212					AK081676	Prlr		ILMN_1257900	002650053	S	896	CTTCTCTTGGTTGGTGGGGGTGAAACCCAGAGCTGTTCATAAAGGCCAGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]; Any process that modulates the frequency, rate or extent of epithelial cell differentiation [goid 30856] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with prolactin to initiate a change in cell activity [goid 4925] [evidence IMP]; Combining with prolactin to initiate a change in cell activity [goid 4925] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199927	ILMN_321197	LOC666334	XR_033021.1	XR_033021.1		666334	149253295	XR_033021.1	LOC666334		ILMN_1218087	006420093	S	166	TAGGACAGGAGACAGCAGGAGCGCGGGCCCTGCTGGCAAGGATATAATGA	4	+	145222572-145222621	4qE1	PREDICTED: Mus musculus similar to Cdv3 protein (LOC666334), misc RNA.					
Mus musculus	RefSeq	ILMN_184210	ILMN_228025	NCOA2	NM_008678.2	NM_008678.2		17978	118026939	NM_008678.2	Ncoa2	NP_032704.2	ILMN_1256574	005550619	S	2838	CCCACGACCAGGGCAACTGGGCAGGTTATTGCCAAACCAGAACTTACCAC	1	-	13155123-13155172	1qA3	Mus musculus nuclear receptor coactivator 2 (Ncoa2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any series of molecular signals generated as a consequence of a steroid hormone binding to its receptor [goid 30518] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IGI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA];  [goid 30375] [evidence IDA];  [goid 30374] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]	TIF2; TIF-2; SRC-2; 9530095N19; GRIP-1; Grip1; D1Ertd433e	TIF2; TIF-2; SRC-2; 9530095N19; GRIP-1; Grip1; D1Ertd433e
Mus musculus	RefSeq	ILMN_199751	ILMN_199751	LOC386514	XM_359363.1	XM_359363.1			38076809	XM_359363.1	LOC386514		ILMN_1258590	006130719	S	82	CTTCAGGCTCTGAGCATCCAGGAGGGTGAAGATGTTACCATGAACTGCAG										
Mus musculus	RefSeq	ILMN_218347	ILMN_218347	CYP2C38	NM_010002.1	NM_010002.1		13097	29789011	NM_010002.1	Cyp2c38	NP_034132.1	ILMN_2694627	000580068	S	2795	ATGACCTATATACAGATGGCTATGGTACTAAATGCGGCTCTTTGTAAATT	19	-	39442891-39442940	19qC3	Mus musculus cytochrome P450, family 2, subfamily c, polypeptide 38 (Cyp2c38), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199894	ILMN_199894	LOC381552	XM_355518.1	XM_355518.1			38078797	XM_355518.1	LOC381552		ILMN_2536867	000630630	S	1080	ATATGTGCAGGTGAGTGCAGAGGCCAGAGCCATTAGATCCCCACGGAGCT										
Mus musculus	RefSeq	ILMN_235468	ILMN_235468	EG434760	NM_001081669.1	NM_001081669.1		434760	126157479	NM_001081669.1	EG434760	NP_001075138.1	ILMN_2917647	001300228	S	106	GGGTGTAAAGACTCTGATGGTGTTGCTGGCTGGAGAGGGAAGAAACGAGG				XqA3.3	Mus musculus predicted gene, EG434760 (EG434760), mRNA.					
Mus musculus	RefSeq	ILMN_213768	ILMN_213768	PAK4	NM_027470.3	NM_027470.3		70584	119672923	NM_027470.3	Pak4	NP_081746.1	ILMN_2640570	003610475	S	2820	GAATCAGGCTCCTGTCCCCCACCCTGCCGCCAGTCCCTCAAGTTAGTTTT	7	-	29343866-29343915	7qA3	Mus musculus p21 (CDKN1A)-activated kinase 4 (Pak4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	mKIAA1142; AW555722; 5730488L07Rik	mKIAA1142; AW555722; 5730488L07Rik
Mus musculus	MEEBO	ILMN_210034	ILMN_210034	B930076A02	scl32933.15.1_222	NM_183311.1			34303992	NM_183311.1	B930076A02		ILMN_1214060	007570500	S	2141	TGTGAAGTTGGTCTCTACTTTGAAACCCTCCTTGGGGTTTGTGACCTCGG										
Mus musculus	MEEBO	ILMN_194292	ILMN_194292	2610206C24RIK	scl52149.1.300_62				51770823	XM_484715	2610206C24Rik		ILMN_2505123	005420113	S	7	CCGAGTAAGTCTTGTCAGCATTAAAAGACACGAGAGCAGCTGTAGCAATA										
Mus musculus	RefSeq	ILMN_209595	ILMN_209595	COL9A3	NM_009936.2	NM_009936.2		12841	112363118	NM_009936.2	Col9a3	NP_034066.2	ILMN_2597314	003520041	S	2381	AAAACACTCAAGAGACTTGTTTACATAACATTTATATAAAGCCTATGATA	2	+	180356425-180356474	2qH4	Mus musculus collagen, type IX, alpha 3 (Col9a3), mRNA.				AV006866	AV006866
Mus musculus	RefSeq	ILMN_221271	ILMN_209595	COL9A3	NM_009936.2	NM_009936.2		12841	112363118	NM_009936.2	Col9a3	NP_034066.2	ILMN_2733257	007650138	S	2725	TAAAGCTCCTTTTGCCCATAAACATTTTCGCAGTACATTGCTTTAATGCC	2	+	180356769-180356818	2qH4	Mus musculus collagen, type IX, alpha 3 (Col9a3), mRNA.				AV006866	AV006866
Mus musculus	RefSeq	ILMN_200508	ILMN_200508	LOC383280	XM_356963.1	XM_356963.1			38082963	XM_356963.1	LOC383280		ILMN_1256570	001660132	S	288	AGGGCAGAGACTTTTACAGGAGCAACAGGAAAGTGTGGTGATGGTGCGCC										
Mus musculus	RefSeq	ILMN_232756	ILMN_232756	OLFR576	NM_001001805.2	NM_001001805.2		258248	126090632	NM_001001805.2	Olfr576	NP_001001805.2	ILMN_2796129	000150082	S	688	CTAGCAGAAAGGCTTAAGGCTCTAAATACCTGTGTCTCCCACATCTGTGC	7	+	110114303-110114352	7qE3	Mus musculus olfactory receptor 576 (Olfr576), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr576-ps1; MGC129202; MOR8-5	Olfr576-ps1; MGC129202; MOR8-5
Mus musculus	RefSeq	ILMN_198805	ILMN_232756	OLFR576	NM_001001805.2	NM_001001805.2		258248	126090632	NM_001001805.2	Olfr576	NP_001001805.2	ILMN_1216249	000940463	S	765	CACCCTGGCTGCCATACATCGCTTTGCCAAACACAAAAGTCCCCTACTTG	7	+	110114380-110114429	7qE3	Mus musculus olfactory receptor 576 (Olfr576), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr576-ps1; MGC129202; MOR8-5	Olfr576-ps1; MGC129202; MOR8-5
Mus musculus	RefSeq	ILMN_242739	ILMN_242739	SVS6	NM_013679.1	NM_013679.1		20945	7305530	NM_013679.1	Svs6	NP_038707.1	ILMN_2894867	006520050	S	218	GTGAAGATGGGGAAGACAGCAAGAGAGCATCTGCAGGGGAGATAGAGCGG	2	+	164008956-164009005	2qH3	Mus musculus seminal vesicle secretion 6 (Svs6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Svp6; MSVSP99	Svp6; MSVSP99
Mus musculus	MEEBO	ILMN_224166	ILMN_224166	BRRN1	scl18712.18.1_54				21450192	NM_144818	Brrn1		ILMN_1213191	003520114	S	2458	CAGTCTGATCTTTATATCCATGTGCTCTGGTCACTTTCTGTGACCGTCCC										
Mus musculus	RefSeq	ILMN_209953	ILMN_209953	NEUROG3	NM_009719.5	NM_009719.5		11925	142351623	NM_009719.5	Neurog3	NP_033849.2	ILMN_2600778	004050347	S	1310	TCGTCTTTACTGCCCGCTACATGCAGGGTTTCTGAGCTTCTCCATTCTGC	10	+	61597281-61597330	10qB4	Mus musculus neurogenin 3 (Neurog3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 44424] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	MGC129292; Atoh5; MGC129293; ngn3; Math4B	MGC129292; Atoh5; MGC129293; ngn3; Math4B
Mus musculus	MEEBO	ILMN_216329	ILMN_216329	BC002118	scl0080296.1_97	NM_030264.1			13385203	NM_030264.1	BC002118		ILMN_2669823	001070468	S	712	GGCCTTTTGATAACCTTCTGCAGCATCTATCAGACCCATGGCACAACACC										
Mus musculus	RefSeq	ILMN_221558	ILMN_221558	F630003A18RIK	NM_177010.2	NM_177010.2		319823	31342584	NM_177010.2	F630003A18Rik	NP_795984.1	ILMN_2831116	005870221	S	1730	GGACTTGATTTCTAATGTAGTTCCCCCATCACTGTAGAGCCCAGGCTGGC	16	+	44761074-44761123	16qB4	Mus musculus RIKEN cDNA F630003A18 gene (F630003A18Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188019	ILMN_188019	TTC4	NM_028209.1	NM_028209.1		72354	30794387	NM_028209.1	Ttc4	NP_082485.1	ILMN_1220820	005050102	S	1709	GACTGTATAAACTTGGATCCTGGGACTACTCAGAGCCCTACTGGATTCTC	4	-	106335161-106335210	4qC7	Mus musculus tetratricopeptide repeat domain 4 (Ttc4), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	L62; AF007005; 2810002P21Rik	L62; AF007005; 2810002P21Rik
Mus musculus	RefSeq	ILMN_213590	ILMN_213590	TERT	NM_009354.1	NM_009354.1		21752	6678290	NM_009354.1	Tert	NP_033380.1	ILMN_2999505	001580100	S	3284	TCTGAGGACAGCCCAAAAACTGCTGTGCCGGAAGCTCCCAGAGGCGACAA	13	+	73785854-73785864:73786358-73786396	13qC1	Mus musculus telomerase reverse transcriptase (Tert), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process whereby new strands of DNA are synthesized, using RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands [goid 6278] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time [goid 3964] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the extension of the 3' end of a DNA strand by one deoxynucleotide at a time. Cannot initiate a chain de novo; uses the RNA subunit of the telomerase enzyme complex as its template [goid 3721] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes extension of the 3'- end of a DNA strand by one deoxynucleotide at a time using an internal RNA template that encodes the telomeric repeat sequence [goid 3720] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TRT; TCS1; TR; TP2; EST2; MGC150124	TRT; TCS1; TR; TP2; EST2; MGC150124
Mus musculus	Riken	ILMN_205217	ILMN_205217	E130012P04RIK	ri|E130012P04|PX00208I02|AK053379|442					AK053379	E130012P04Rik		ILMN_2570888	003840300	S	174	AGCGCCACATTGCCTGGATGTTATTTCCATCGCTACTAGTTTGCCTGTCC										
Mus musculus	Riken	ILMN_205872	ILMN_205872	OPHN1	ri|C130037N19|PX00169O24|AK048153|3007					AK048153	Ophn1		ILMN_1217614	004560286	S	2428	CTGGGTCCTCTCCTTTACCTGAACGTGAGAGTACCTATTTTCTGCTGACT						The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]		
Mus musculus	RefSeq	ILMN_200656	ILMN_226725	EG383436	XM_916015.1	XM_916015.1		383436	82998912	XM_916015.1	EG383436	XP_921108.1	ILMN_1233258	004640253	S	91	GCCCTCATTAAAGCAGCCCTCATCAAACCTTTCTGGCCTAGCTTGTTTGC				19qA	PREDICTED: Mus musculus predicted gene, EG383436, transcript variant 3 (EG383436), mRNA.					
Mus musculus	RefSeq	ILMN_216425	ILMN_216425	ACCN1	NM_007384.2	NM_007384.2		11418	111074520	NM_007384.2	Accn1	NP_031410.1	ILMN_1255375	007330561	S	748	TCCTCGAACCGCCTGCTCTACTGGCTCAGTTTCCCGTCACACACGCGAGT	11	-	80965608-80965657	11qB5	Mus musculus amiloride-sensitive cation channel 1, neuronal (degenerin) (Accn1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The series of events in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50974] [evidence IMP]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP];  [goid 15280] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	ACIC2; BNC1; Mdeg; BNaC1a; ASIC2	ACIC2; BNC1; Mdeg; BNaC1a; ASIC2
Mus musculus	RefSeq	ILMN_216425	ILMN_216425	ACCN1	NM_007384.2	NM_007384.2		11418	111074520	NM_007384.2	Accn1	NP_031410.1	ILMN_1219242	000780707	S	2697	CTCCTTCTTTTCTCAGCACCTGTGGAGGAAGTACGGTGGCCTGGGTGACC	11	-	80693942-80693991	11qB5	Mus musculus amiloride-sensitive cation channel 1, neuronal (degenerin) (Accn1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IDA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IMP]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acid stimulus [goid 1101] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The series of events in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50974] [evidence IMP]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IMP];  [goid 15280] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	ACIC2; BNC1; Mdeg; BNaC1a; ASIC2	ACIC2; BNC1; Mdeg; BNaC1a; ASIC2
Mus musculus	RefSeq	ILMN_260040	ILMN_260040	OLFR1137	NM_001011833.1	NM_001011833.1		258101	58801429	NM_001011833.1	Olfr1137	NP_001011833.1	ILMN_2994753	004390725	S	544	CCACCACTGTACCTCCTTTCCTGTTCTGACACACAAGCAAACGAGCTAGT	2	-	87551468-87551517	2qD	Mus musculus olfactory receptor 1137 (Olfr1137), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR177-20; MOR40-9P	MOR177-20; MOR40-9P
Mus musculus	RefSeq	ILMN_245758	ILMN_245758	EI24	NM_007915.1	NM_007915.1		13663	6681288	NM_007915.1	Ei24	NP_031941.1	ILMN_2953677	006520010	S	1681	GGGAAATGGAGCCTGAAGAGTTGGGGCAGATAGACCTCAGCCAAACTGGC	9	-	36529203-36529252	9qA4	Mus musculus etoposide induced 2.4 mRNA (Ei24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AA536736; AI115355; PIG8	AA536736; AI115355; PIG8
Mus musculus	Riken	ILMN_203134	ILMN_203134	6430628O11RIK	ri|6430628O11|PX00048G06|AK032597|2611					AK032597	6430628O11Rik		ILMN_1254782	005220010	S	2408	TAGGACACAAAGTGGGATTCAGTCCTCTGGAGCAACGCTTATCAGCTTCC										
Mus musculus	RefSeq	ILMN_200291	ILMN_200291	LOC386149	XM_359094.1	XM_359094.1			38081238	XM_359094.1	LOC386149		ILMN_2538252	005260465	S	760	CAAGAGGAGGGGCCAGCTCTCCAGCTTGCTCTATCTAAGCTTCCCAGACA										
Mus musculus	Riken	ILMN_203151	ILMN_203151	6720451B01RIK	ri|6720451B01|PX00059F07|AK032782|1908					AK032782	6720451B01Rik		ILMN_1233680	004070682	S	1638	CCTGTGTGCGTACAGATGGATGTAGGACATAGCTGCCCCAGTGGGAAAGG										
Mus musculus	RefSeq	ILMN_191193	ILMN_242611	TBC1D4	XM_619279.3	XM_619279.3		210789	94397707	XM_619279.3	Tbc1d4	XP_619279.2	ILMN_1250778	006980767	S	3194	AGCTATTCAAGCAGGGCTCAGGGCTCCGGTCCGTCCACACTCAGTCTTGG				14qE2.3	PREDICTED: Mus musculus TBC1 domain family, member 4, transcript variant 2 (Tbc1d4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185778	ILMN_313927	2210008F06RIK	XM_001476877.1	XM_001476877.1		70057	149262208	XM_001476877.1	2210008F06Rik	XP_001476927.1	ILMN_2429915	006420494	S	965	TTGCAAACTCCTTGCGCCCTTCTTGGGTTTCTTTGTGTGTTCTTCTCTCC				11qB5	PREDICTED: Mus musculus RIKEN cDNA 2210008F06 gene (2210008F06Rik), mRNA.					
Mus musculus	RefSeq	ILMN_220727	ILMN_251902	LOC674135	XR_004604.2	XR_004604.2		674135	149269257	XR_004604.2	LOC674135		ILMN_2732816	005720048	S	788	CAGGACATGGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCA	17	-	36274317-36274366		PREDICTED: Mus musculus similar to HLA-G protein (LOC674135), misc RNA.					
Mus musculus	MEEBO	ILMN_220894	ILMN_220894	D130072O21RIK	scl0102143.1_151	NM_175322.2			31341598	NM_175322.2	D130072O21Rik		ILMN_1258658	004780424	S	3052	CAGCATGTAAATTCTCTGGTCTTTATAGCGTTCACCTGGAATGGACGACC										
Mus musculus	RefSeq	ILMN_232192	ILMN_232192	AI597468	NM_001013028.1	NM_001013028.1		103266	61557490	NM_001013028.1	AI597468	NP_001013046.1	ILMN_3160449	006760671	S	2434	CCCTGGAGAGAGGAAGGGAGTGGTGCCTTGGTGTAAGTCAAAATGTAGTG	10	+	84579295-84579344	10qC1	Mus musculus expressed sequence AI597468 (AI597468), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_215387	ILMN_215387	OLFR1480	NM_207575.1	NM_207575.1		404339	46430751	NM_207575.1	Olfr1480	NP_997458.1	ILMN_2658864	000050463	S	769	ATGTACTTACAACCCAGCTCCAATCACTCCATGGACACTGACAAGTTGGC	19	+	13604933-13604982	19qA	Mus musculus olfactory receptor 1480 (Olfr1480), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR202-44	MOR202-44
Mus musculus	RefSeq	ILMN_216541	ILMN_216541	EFCAB1	NM_025769.1	NM_025769.1		66793	21313313	NM_025769.1	Efcab1	NP_080045.1	ILMN_2917280	002900615	S	861	GTTCAGGACACCCTCAGATATGCTGGGTTTGGCAAGAGAGGTTAACATTG	16	+	14837833-14837882	16qA1	Mus musculus EF hand calcium binding domain 1 (Efcab1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	5430404L10Rik; 4930449A16Rik	5430404L10Rik; 4930449A16Rik
Mus musculus	RefSeq	ILMN_196352	ILMN_196352	6030448M23RIK	NM_175339.2	NM_175339.2			31341638	NM_175339.2	6030448M23Rik		ILMN_1240337	001740743	S	2134	CGGCAGACTAGAAAGGCTGTTGTGTGGGATTCTGGGGTGATGTGGAGCCA										
Mus musculus	MEEBO	ILMN_222760	ILMN_222760	RPL32	scl019951.1_25				25742729	NM_172086	Rpl32		ILMN_1232890	000380382	S	371	ACCGAAAAGCCATTGTAGAAAGAGCAGCACAGCTGGCCATCAGAGTCACC						An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IC ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IC ]		
Mus musculus	MEEBO	ILMN_184632	ILMN_184632	BMP2K	scl48621.3_721				18129621	NM_080708	Bmp2k		ILMN_2752763	005560435	S	3249	AGGTGGGCCGCAGAGACTCCCAGAGCAGCAATGAGTTTTTAACCATTTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19208] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]		
Mus musculus	RefSeq	ILMN_194386	ILMN_194386	TMC5	NM_028930.2	NM_028930.2		74424	133893327	NM_028930.2	Tmc5	NP_083206.1	ILMN_2505970	002360070	S	2567	ACCTCCGTGACAGATGGGCCTCAGGAGCTTCTCGGGAGTGGAATCCAAGC	7	+	125818241-125818290	7qF2	Mus musculus transmembrane channel-like gene family 5 (Tmc5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AU016085; 4932443L08Rik; MGC118178	AU016085; 4932443L08Rik; MGC118178
Mus musculus	Riken	ILMN_205175	ILMN_205175	C230094L10RIK	ri|C230094L10|PX00177B10|AK049042|3372					AK049042	C230094L10Rik		ILMN_1230165	001110600	S	2803	GATCTATTCAGGGAAGAGGTGAACAGAGGAGCCAGATAGCCTGCAGCTGG										
Mus musculus	MEEBO	ILMN_212493	ILMN_212493	AQP6	scl011831.7_150				31341263	NM_175087	Aqp6		ILMN_2770991	000460598	S	1729	CCCTGGGCCAGAAGCCTCTAAGGTCTGATTTTCAACACCTTGTCCCCTGT						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [evidence TAS]		
Mus musculus	MEEBO	ILMN_196244	ILMN_196244	PRKAR1B-RS	scl0019086.1_236						Prkar1b-rs		ILMN_2522930	004810437	S	9	GACACTCATGTGGCCCTTGGGTCTGGCTGGCTCATATCACACTCCACGGT										
Mus musculus	MEEBO	ILMN_187542	ILMN_187542	4933408M05RIK	scl074449.1_119						4933408M05Rik		ILMN_2445012	000780220	S	19	CACTGATTGGCCCTGCAAGAAGACAGAAGTCTCATTTAAACAAGCGCAGG										
Mus musculus	RefSeq	ILMN_194952	ILMN_240426	FRMD8	NM_026169.4	NM_026169.4		67457	142367845	NM_026169.4	Frmd8	NP_080445.1	ILMN_2716876	003140619	S	2939	GTAACCACACGTGTCCTGTGTGCCCATGGTATAGCCTCAGGTCTTCACCC	19	-	5851151-5851200	19qA	Mus musculus FERM domain containing 8 (Frmd8), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]			4931429L16Rik; AU018809; 2310035N23Rik	4931429L16Rik; AU018809; 2310035N23Rik
Mus musculus	RefSeq	ILMN_185765	ILMN_240426	FRMD8	NM_026169.4	NM_026169.4		67457	142367845	NM_026169.4	Frmd8	NP_080445.1	ILMN_2429816	002480431	S	2836	TTAGTAAAACAGTGCTCTGTCCTAGAGGGTTAAGGCACATGTGGTAATTA	19	-	5851254-5851303	19qA	Mus musculus FERM domain containing 8 (Frmd8), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]			4931429L16Rik; AU018809; 2310035N23Rik	4931429L16Rik; AU018809; 2310035N23Rik
Mus musculus	Riken	ILMN_202550	ILMN_202550	5730550L01RIK	ri|5730550L01|PX00006J08|AK017827|3724					AK017827	5730550L01Rik		ILMN_1224982	003800451	S	3513	GGATGTTCCTCTCCAGCGATACGAGGTACTTTCTAAGCTATTAAGGAGGG										
Mus musculus	RefSeq	ILMN_242502	ILMN_242502	LOC622404	NM_001037913.1	NM_001037913.1		622404	85702295	NM_001037913.1	LOC622404	NP_001033002.1	ILMN_2872552	005260379	S	687	AGGGGCTGAGGAGAAGGTGGCACAAGACGGTGACAAAGGGTCCAGCAGTA	4	+	43508698-43508747	4qB1	Mus musculus hypothetical protein LOC622404 (LOC622404), mRNA.				MGC36291	MGC36291
Mus musculus	RefSeq	ILMN_201641	ILMN_242502	LOC622404	NM_001037913.1	NM_001037913.1		622404	85702295	NM_001037913.1	LOC622404	NP_001033002.1	ILMN_1235970	006400010	S	139	AGAACGGGGCTCCCAGGTCAGTCCGGGAACCACCGAACCTCGGCGGCAGC	4	+	43506407-43506408:43506480-43506527	4qB1	Mus musculus hypothetical protein LOC622404 (LOC622404), mRNA.				MGC36291	MGC36291
Mus musculus	RefSeq	ILMN_220619	ILMN_220619	SFRP2	NM_009144.1	NM_009144.1		20319	6677894	NM_009144.1	Sfrp2	NP_033170.1	ILMN_1214602	004230446	S	1718	CCAGCTACAGAACTTCAGTTTATAAGCACACAGTAACCATTCCTCATTGC	3	+	83577953-83578002	3qE3	Mus musculus secreted frizzled-related protein 2 (Sfrp2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Sdf5; AI851596	Sdf5; AI851596
Mus musculus	Riken	ILMN_206041	ILMN_206041	SNAP91	ri|D130011L12|PX00182C11|AK051176|3063					AK051176	Snap91		ILMN_1240692	001660653	S	2612	TCCAGCATACCGGGTGGTCAGACAGTTTCTGTAGAAGTCCCTAGTCTTCC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes [goid 30118] [evidence IEA]	The process by which clathrin triskelia are assembled into the ordered structure known as a clathrin cage [goid 48268] [evidence IEA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]; Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence IEA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215482	ILMN_215482	LRRC57	NM_025657.2	NM_025657.2		66606	31981232	NM_025657.2	Lrrc57	NP_079933.2	ILMN_2898944	002100333	S	1083	CATGAAGGGAGGAAATGCTGCTTGCCATAGCTGGAGACTTTGAGTTTGCG	2	-	120430648-120430697	2qE5	Mus musculus leucine rich repeat containing 57 (Lrrc57), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AA407405; 2810002D13Rik	AA407405; 2810002D13Rik
Mus musculus	RefSeq	ILMN_190874	ILMN_313747	LOC100046741	XM_001476728.1	XM_001476728.1		100046741	149262204	XM_001476728.1	LOC100046741	XP_001476778.1	ILMN_2677472	000010341	S	1707	GATCTTTCTTGGTCTGAGGGAAAACCAGCGCATCAGTGGGTTCTTGGGCA					PREDICTED: Mus musculus similar to red-1 (LOC100046741), mRNA.					
Mus musculus	Riken	ILMN_205355	ILMN_205355	D030018H12RIK	ri|D030018H12|PX00179M07|AK050771|2374					AK050771	D030018H12Rik		ILMN_1215334	003420324	S	2080	CTTGGGCCAGAAACCAGGAGCAGAACTCAGGGTCCCCCTTCACTTTATGC										
Mus musculus	RefSeq	ILMN_210045	ILMN_210045	TMEM166	NM_145570.1	NM_145570.1		232146	21704145	NM_145570.1	Tmem166	NP_663545.1	ILMN_2813577	002600563	S	997	TTTCAGGTCTTGACAGCCACCTGGGCACACCAGCCCAATGCTTTCAGGCC	6	+	82042367-82042416	6qC3	Mus musculus transmembrane protein 166 (Tmem166), mRNA.				MGC25911; MGC37042; BC014699	MGC25911; MGC37042; BC014699
Mus musculus	RefSeq	ILMN_211375	ILMN_256716	CDK2	NM_183417.2	NM_183417.2		12566	83715990	NM_183417.2	Cdk2	NP_904326.1	ILMN_1233064	000630446	S	2226	GTCAGTGTGGATGGATTTGTTGCCATGTGCACTTTGGGATTTTGTAATTG	10	-	128135112-128135161	10qD3	Mus musculus cyclin-dependent kinase 2 (Cdk2), transcript variant 1, mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males [goid 805] [evidence IDA]; The sex chromosome present in males of species in which the male is the heterogametic sex; generally, the sex chromosome that pairs with the X chromosome in the heterogametic sex. The Y chromosome is absent from the cells of females and present in one copy in the somatic cells of males [goid 806] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IGI]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IGI]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	A630093N05Rik	A630093N05Rik
Mus musculus	RefSeq	ILMN_211375	ILMN_256716	CDK2	NM_183417.2	NM_183417.2		12566	83715990	NM_183417.2	Cdk2	NP_904326.1	ILMN_1250942	003870112	S	689	CCGAGCACCTGAAATTCTTCTGGGCTGCAAGTACTACTCCACAGCCGTGG	10	-	128138433-128138482	10qD3	Mus musculus cyclin-dependent kinase 2 (Cdk2), transcript variant 1, mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males [goid 805] [evidence IDA]; The sex chromosome present in males of species in which the male is the heterogametic sex; generally, the sex chromosome that pairs with the X chromosome in the heterogametic sex. The Y chromosome is absent from the cells of females and present in one copy in the somatic cells of males [goid 806] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IGI]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IGI]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	A630093N05Rik	A630093N05Rik
Mus musculus	RefSeq	ILMN_223868	ILMN_256716	CDK2	NM_183417.2	NM_183417.2		12566	83715990	NM_183417.2	Cdk2	NP_904326.1	ILMN_2770759	002000440	S	1313	GTCTTAGCATTCGCCTTTTCTCTTGCCAGCCAGTTCTGGGGATTCAGAGG	10	-	128136025-128136074	10qD3	Mus musculus cyclin-dependent kinase 2 (Cdk2), transcript variant 1, mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The sex chromosome present in both sexes of species in which the male is the heterogametic sex. Two copies of the X chromosome are present in each somatic cell of females and one copy is present in males [goid 805] [evidence IDA]; The sex chromosome present in males of species in which the male is the heterogametic sex; generally, the sex chromosome that pairs with the X chromosome in the heterogametic sex. The Y chromosome is absent from the cells of females and present in one copy in the somatic cells of males [goid 806] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IGI]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IGI]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	A630093N05Rik	A630093N05Rik
Mus musculus	MEEBO	ILMN_221203	ILMN_221203	2410170E21RIK	scl30676.4_510	NM_029420.1			21313075	NM_029420.1	2410170E21Rik		ILMN_2732394	006580343	S	1792	CAGGCATCCCTTGGAAAGCTACCAAACTTTTCGACTGGACTCTACCCCCA										
Mus musculus	Riken	ILMN_206295	ILMN_206295	C130007P11RIK	ri|C130007P11|PX00167L19|AK081342|4235					AK081342	C130007P11Rik		ILMN_1247174	003420519	S	4162	GAGGTTCTGGAGAAAGGTGTGGATTGTGCCCAGGAGAGAAGCTCAGATGC										
Mus musculus	MEEBO	ILMN_185400	ILMN_185400	D2ERTD485E	scl0329506.2_221				47059058	NM_212450	D2Ertd485e		ILMN_2426728	001770184	S	20	CACAATATTTATGTTTTTATACTTCATAATCATAGCCTTTACAATTCAGA										
Mus musculus	MEEBO	ILMN_185400	ILMN_185400	D2ERTD485E	scl0329506.2_221				47059058	NM_212450	D2Ertd485e		ILMN_2626003	004230754	S	4184	GCACACAGCAAGCTACCTGTGTACACATTACAACTCTTAAGGACCTATTA										
Mus musculus	RefSeq	ILMN_186270	ILMN_234120	LRRC9	NM_030070.2	NM_030070.2		78257	142353356	NM_030070.2	Lrrc9	NP_084346.1	ILMN_1226411	000050497	S	3574	TCCTGTCGACCACTTCAGGAATGTGAGCAACGTGAATCTCCAGAACAACA	12	+	73598050-73598099	12qC3	Mus musculus leucine rich repeat containing 9 (Lrrc9), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4921529O18Rik; 4930432K16Rik	4921529O18Rik; 4930432K16Rik
Mus musculus	RefSeq	ILMN_200540	ILMN_200540	LOC384343	XM_357590.1	XM_357590.1			38083461	XM_357590.1	LOC384343		ILMN_1215809	000580286	S	269	GCATGACTGGATTGATGGACCCTCTCTGGACTTGGTTCTGGGTCTGTCGC										
Mus musculus	RefSeq	ILMN_196434	ILMN_238820	SLC35F4	NM_029238.2	NM_029238.2		75288	142363008	NM_029238.2	Slc35f4	NP_083514.1	ILMN_1217470	000010725	S	1568	CAACAGCCTGAAGGAGAAGAAGAGTGAGGAGCATGTGGAGGACCTGACAG	14	-	49918458-49918507	14qC1	Mus musculus solute carrier family 35, member F4 (Slc35f4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		4930550L21Rik	4930550L21Rik
Mus musculus	MEEBO	ILMN_190785	ILMN_190785	SNX4	scl49217.14.1_3				18017595	NM_080557	Snx4		ILMN_2473269	001770133	S	18	GCCATATTATGTTTTAAAGTGGCCTGATGTTGGTGTTTTGAGAAACAAGA							The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209614	ILMN_209614	RALA	NM_019491.5	NM_019491.5		56044	118130690	NM_019491.5	Rala	NP_062364.3	ILMN_2597481	001340326	S	1910	GTGGTCTGTACAAGGACACTGGAGGAAGTATGTTTGCTACCTGTAAGTTC	13	-	17973111-17973160	13qA2	Mus musculus v-ral simian leukemia viral oncogene homolog A (ras related) (Rala), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rasl1; Ral; AW322615; 3010001O15Rik	Rasl1; Ral; AW322615; 3010001O15Rik
Mus musculus	Riken	ILMN_203300	ILMN_203300	SEMA3E	ri|C430045N03|PX00080F10|AK049580|1897					AK049580	Sema3e		ILMN_1228525	004490092	S	1581	ATAAATCCCAAAACACAGCCTGCAGTTTCCCATGGCCCCTCAGGCAGCTG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]			
Mus musculus	RefSeq	ILMN_217160	ILMN_217160	4930415F15RIK	XM_203398.3	XM_203398.3		73862	94389905	XM_203398.3	4930415F15Rik	XP_203398.1	ILMN_2679749	000010180	S	555	AATGAGAGTCGACCGCTTCCGTCACCAGGGCCCAATGTCCCAAATGGTGA	11	+	11414995-11415044	11qA1	PREDICTED: Mus musculus RIKEN cDNA 4930415F15 gene (4930415F15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_193366	ILMN_193366	MORC4	NM_029413.1	NM_029413.1		75746	30794185	NM_029413.1	Morc4	NP_083689.1	ILMN_2496510	000650431	S	4321	GGAAAGCTGCCAGCCACCGCACAAGTGTTCCATGGTGTTTTTATTGTCAT	X	-	135168037-135168086	XqF1	Mus musculus microrchidia 4 (Morc4), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AA117449; MGC107438; Zcwcc2; 5630401M14Rik	AA117449; MGC107438; Zcwcc2; 5630401M14Rik
Mus musculus	Riken	ILMN_204681	ILMN_204681	A330021D07RIK	ri|A330021D07|PX00130B03|AK039311|1319					AK039311	A330021D07Rik		ILMN_1253985	000270411	S	220	GTTTCGTGACCCATCAAGTGTTGGTGTGGCCCAGCATCTAACTAACACGG										
Mus musculus	RefSeq	ILMN_196819	ILMN_196819	LOC216499	XM_137390.1	XM_137390.1			20867959	XM_137390.1	LOC216499		ILMN_1221755	000160280	S	501	GAATCCTCTGATTTATAGCTTAAGGAATACAGAGTGTATTCAAAAGTTAT										
Mus musculus	MEEBO	ILMN_223808	ILMN_223808	NFKBIA	scl42451.6.1_16				6754839	NM_010907	Nfkbia		ILMN_1218605	000450110	S	988	GAGGCCAGCGTCTGACATTATAAGTGGAAAGTGGCAAAAAGAATGTGGAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the Notch signaling pathway [goid 45746] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [evidence IMP]			
Mus musculus	RefSeq	ILMN_201105	ILMN_234150	EG625917	XM_917009.3	XM_917009.3		625917	149270748	XM_917009.3	EG625917	XP_922102.1	ILMN_1229034	000070424	S	119	GAGTGGGCTTCCAGAAGCGTGCTCCTCGGGCACTCAAAGAAATTCGGAAG				19qC1	PREDICTED: Mus musculus predicted gene, EG625917 (EG625917), mRNA.					
Mus musculus	MEEBO	ILMN_193723	ILMN_193723	D430030K24RIK	scl33077.4_485				31559843	NM_178732	D430030K24Rik		ILMN_2499817	006450360	S	9	AAAGTGAGCTGCCCCAGAGCAGCGGTTCTGTTGGTAGATGAGCCCTTGCG										
Mus musculus	RefSeq	ILMN_199800	ILMN_199800	LOC383025	XM_356805.1	XM_356805.1			38077503	XM_356805.1	LOC383025		ILMN_1215448	001990561	S	597	GGAGGACGTGACTGATGGTTCCCTTGTTCTGCTGGTGCGGAAGCTGGAAC										
Mus musculus	RefSeq	ILMN_213984	ILMN_213984	HSD17B11	NM_053262.3	NM_053262.3		114664	118131125	NM_053262.3	Hsd17b11	NP_444492.1	ILMN_2642985	006900672	S	801	CGGGATCCTCACTGAGAAGCAAATGATTTTCGTTCCGAGTTCCATAGCAC	5	-	104421855-104421904	5qE5	Mus musculus hydroxysteroid (17-beta) dehydrogenase 11 (Hsd17b11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]	SDR2; Pan1b; Dhrs8; retSDR2	SDR2; Pan1b; Dhrs8; retSDR2
Mus musculus	RefSeq	ILMN_213984	ILMN_213984	HSD17B11	NM_053262.3	NM_053262.3		114664	118131125	NM_053262.3	Hsd17b11	NP_444492.1	ILMN_2685234	001340717	S	532	ATGATGAAGAATAATCATGGCCACATTGTCACTGTGGCATCAGCAGCAGG	5	-	104437630-104437679	5qE5	Mus musculus hydroxysteroid (17-beta) dehydrogenase 11 (Hsd17b11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]	SDR2; Pan1b; Dhrs8; retSDR2	SDR2; Pan1b; Dhrs8; retSDR2
Mus musculus	RefSeq	ILMN_213984	ILMN_213984	HSD17B11	NM_053262.3	NM_053262.3		114664	118131125	NM_053262.3	Hsd17b11	NP_444492.1	ILMN_2705361	003180079	S	945	AGACAAGTGACGCAGCCTGCTCCGGTTCCCTGAAAGCCGATTGACTGGAT	5	-	104419488-104419528:104419529-104419537	5qE5	Mus musculus hydroxysteroid (17-beta) dehydrogenase 11 (Hsd17b11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]	SDR2; Pan1b; Dhrs8; retSDR2	SDR2; Pan1b; Dhrs8; retSDR2
Mus musculus	Riken	ILMN_205636	ILMN_205636	C530020F12RIK	ri|C530020F12|PX00081B21|AK049669|4845					AK049669	C530020F12Rik		ILMN_1250345	004490338	S	4447	TCCTCTCGAACACTGGAATTAAAGGTGTTAGGCAGTGGGCCTAACGTGCC										
Mus musculus	RefSeq	ILMN_215284	ILMN_215284	CACNA1F	NM_019582.2	NM_019582.2		54652	115648150	NM_019582.2	Cacna1f	NP_062528.2	ILMN_2745383	001580725	S	5715	ATCCGAATCCCAGCCACCGCAAGAGGGGCAGTGCTGACAGTTTGGTGGAG	X	+	7211718-7211767	XqA1.1	Mus musculus calcium channel, voltage-dependent, alpha 1F subunit (Cacna1f), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISO]; Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence ISO]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]	Cav1.4; A930034B14; Sfc17	Cav1.4; A930034B14; Sfc17
Mus musculus	RefSeq	ILMN_198615	ILMN_312982	EG212753	XM_001478790.1	XM_001478790.1		212753	149274217	XM_001478790.1	EG212753	XP_001478840.1	ILMN_1218232	000010711	S	181	CCATTCCCAGTTGGCGATAGGCAGCATCAAATACAAGCCATAGGGGGCTG				XqD	PREDICTED: Mus musculus predicted gene, EG212753 (EG212753), mRNA.					
Mus musculus	RefSeq	ILMN_222531	ILMN_222531	PTPN6	NM_013545.2	NM_013545.2		15170	118130770	NM_013545.2	Ptpn6	NP_038573.2	ILMN_3113420	002810541	A	2109	CTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCC	6	-	124673912-124673961	6qF2	Mus musculus protein tyrosine phosphatase, non-receptor type 6 (Ptpn6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein [goid 42105] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IMP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2924] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50732] [evidence IMP]; Any process that modulates the frequency, rate or extent of B cell differentiation [goid 45577] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence IDA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	motheaten; Hcph; hcp; me; Ptp1C; SHP-1	motheaten; Hcph; hcp; me; Ptp1C; SHP-1
Mus musculus	RefSeq	ILMN_198386	ILMN_242121	GM960	NM_001033447.2	NM_001033447.2		381196	141802976	NM_001033447.2	Gm960	NP_001028619.1	ILMN_1230223	006660669	S	373	TCTGGCTTCAGAGGAGGGGGGCCGTTCTCAAGACGCATCAGGCATAGCAC	19	-	4672077-4672126	19qA	Mus musculus gene model 960, (NCBI) (Gm960), mRNA.					
Mus musculus	Riken	ILMN_206500	ILMN_206500	D630011N09RIK	ri|D630011N09|PX00196J02|AK085324|1960					AK085324	D630011N09Rik		ILMN_2580554	007650543	S	1351	CTCCCTGAGGTCAGCTGCCAACAAGTCTCACAAACAGAAGATTCCAGGTC										
Mus musculus	RefSeq	ILMN_210489	ILMN_210489	CD300LF	NM_145634.2	NM_145634.2		246746	83699401	NM_145634.2	Cd300lf	NP_663609.2	ILMN_2606144	003170487	S	935	TTGGCCGGCTTGGGTCAGGAGCCTACTTATGGCAATACTGGCTGCCCCAT	11	-	114978372-114978421	11qE2	Mus musculus CD300 antigen like family member F (Cd300lf), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Digr2; IREM1; IgSF13; Pigr3; F730004D16Rik; CLM1; CLIM1; CLM-1	Digr2; IREM1; IgSF13; Pigr3; F730004D16Rik; CLM1; CLIM1; CLM-1
Mus musculus	RefSeq	ILMN_217176	ILMN_217176	OLFR203	NM_146486.1	NM_146486.1		258479	22203780	NM_146486.1	Olfr203	NP_666697.1	ILMN_2987044	006590400	S	604	GCTGCTGTGATACAAGCTGTTACCTTCATGAGTATTGCAGTCTCCTATGC	16	+	59303584-59303633	16qC1.3	Mus musculus olfactory receptor 203 (Olfr203), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR182-5; MGC157633	MOR182-5; MGC157633
Mus musculus	RefSeq	ILMN_217176	ILMN_217176	OLFR203	NM_146486.1	NM_146486.1		258479	22203780	NM_146486.1	Olfr203	NP_666697.1	ILMN_1214508	001990538	S	16	CCCTGGTGACTGCGTTTATTCTCAGAGGAATAACAGATCTTCCAGAGCTG	16	+	59302996-59303045	16qC1.3	Mus musculus olfactory receptor 203 (Olfr203), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR182-5; MGC157633	MOR182-5; MGC157633
Mus musculus	MEEBO	ILMN_222036	ILMN_222036	CYT28	scl000651.1_12				6006810	AF166382	Cyt28		ILMN_1252152	006520204	S	224	GGAGACATTAGCAGCAAAGGCTGTTAACAGAAGTGCCTGCCTAGGCTTGG										
Mus musculus	MEEBO	ILMN_211586	ILMN_211586	FLOT2	scl0001322.1_3	NM_008028.1			6679810	NM_008028.1	Flot2		ILMN_2617384	007330471	S	222	CTAGAGATTATGACGTTGCAGCCCCGCTGTGAGGACGTAGAGACGGCCGA						Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; A heteromeric complex of flotillin 1, flotillin 2, caveolin 1 and caveolin 2 within the caveolar membrane [goid 16600] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216891	ILMN_225120	GRIFIN	NM_030022.1	NM_030022.1		77998	115749431	NM_030022.1	Grifin	NP_084298.1	ILMN_2676543	006560019	S	467	CTACAAGAGCCAGCCTTGACCATCCTGCATCCCCTTCTACCTGGAGCCAC	5	-	141039165-141039214	5qG2	Mus musculus galectin-related inter-fiber protein (Grifin), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC130284; MGC130311; E130101O17Rik	MGC130284; MGC130311; E130101O17Rik
Mus musculus	MEEBO	ILMN_223290	ILMN_223290	DTNBP1	scl44037.11.1_29	NM_025772.3			24475734	NM_025772.3	Dtnbp1		ILMN_2762056	007040709	S	1162	ACTCAACTCAGGACATTTAAGTGACTTGTCAGCTGTGCGCAGAATCCTCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The cytoplasm of a muscle fiber; includes the sarcoplasmic reticulum [goid 16528] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IPI]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_234411	ILMN_234411	STX19	NM_026588.1	NM_026588.1		68159	23956189	NM_026588.1	Stx19	NP_080864.1	ILMN_2913528	001440632	S	924	GAGACACAAGGAACTTGTGAATTTGGAGAACCAAGTGAAGGACCTCCGGG	16	+	62822284-62822333	16qC1.3	Mus musculus syntaxin 19 (Stx19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	A030009B12Rik	A030009B12Rik
Mus musculus	RefSeq	ILMN_214160	ILMN_214160	OAS1H	NM_145228.1	NM_145228.1		246729	21699071	NM_145228.1	Oas1h	NP_660263.1	ILMN_1242017	004050600	S	1626	GCATGGACTTTGAAATTTTGATGTGTTTGTGAGGATGAAATTTGAAGCAC	5	+	121323439-121323488	5qF	Mus musculus 2'-5' oligoadenylate synthetase 1H (Oas1h), mRNA.					
Mus musculus	RefSeq	ILMN_216501	ILMN_216501	CLDN2	NM_016675.3	NM_016675.3		12738	47270694	NM_016675.3	Cldn2	NP_057884.1	ILMN_1255479	005270048	S	2697	GCTGACCTGGAAGCCATTTCCTTTTAACTAAGTCATCCCCATGCTTGGAG	X	+	136345578-136345627	XqF1	Mus musculus claudin 2 (Cldn2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence IDA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AL022813	AL022813
Mus musculus	RefSeq	ILMN_216501	ILMN_216501	CLDN2	NM_016675.3	NM_016675.3		12738	47270694	NM_016675.3	Cldn2	NP_057884.1	ILMN_2980323	001030402	S	2423	GCCTGGGATTGTGCTTGAGGTGGGAGAACGGAGACTGGTTCCCTGTCCAA	X	+	136345304-136345353	XqF1	Mus musculus claudin 2 (Cldn2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence IDA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	AL022813	AL022813
Mus musculus	RefSeq	ILMN_189876	ILMN_189876	XLR3C	NM_011727.2	NM_011727.2		22446	154091004	NM_011727.2	Xlr3c	NP_035857.2	ILMN_2465183	001820291	S	476	CAAGAAACATGCCGAAACACTCTCTAATATGTTTATGGAGCAACAGAAGT				XqA7.3	Mus musculus X-linked lymphocyte-regulated 3C (Xlr3c), mRNA.				Xlr3b	Xlr3b
Mus musculus	RefSeq	ILMN_214733	ILMN_214733	TMEM184A	NM_144914.2	NM_144914.2		231832	31560761	NM_144914.2	Tmem184a	NP_659163.2	ILMN_2894396	000430504	S	1910	TAGCCTATTTAGCACAACAGAGTTGCCAGTGCGCCAGCCTACCAGCAACT	5	-	140280944-140280993	5qG2	Mus musculus transmembrane protein 184a (Tmem184a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC30809; MGC37596	MGC30809; MGC37596
Mus musculus	RefSeq	ILMN_214733	ILMN_214733	TMEM184A	NM_144914.2	NM_144914.2		231832	31560761	NM_144914.2	Tmem184a	NP_659163.2	ILMN_1242101	003780113	S	1422	GTCGCAACATAGAGAAACGCATGCTGATTCCCTCAGAGGACCTGTAGGGG	5	-	140281432-140281435:140281436-140281481	5qG2	Mus musculus transmembrane protein 184a (Tmem184a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC30809; MGC37596	MGC30809; MGC37596
Mus musculus	Riken	ILMN_201933	ILMN_201933	8430406H22RIK	ri|8430406H22|PX00024N03|AK018386|1243					AK018386	8430406H22Rik		ILMN_1215675	003130427	S	893	CTGGGAAGCCAGTAAGAGCACCACACAGACACGTGAAGTCAGACGGCTTG										
Mus musculus	RefSeq	ILMN_208970	ILMN_208970	SMPX	NM_025357.1	NM_025357.1		66106	14149751	NM_025357.1	Smpx	NP_079633.1	ILMN_2591308	006420386	S	396	CAGGACCTGTTGTCAACTTGTCTGAGATCCAAAATGTTAAAAGTGAACTG	X	+	154158918-154158967	XqF4	Mus musculus small muscle protein, X-linked (Smpx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			1010001C09Rik; Csl	1010001C09Rik; Csl
Mus musculus	RefSeq	ILMN_208970	ILMN_208970	SMPX	NM_025357.1	NM_025357.1		66106	14149751	NM_025357.1	Smpx	NP_079633.1	ILMN_2785679	005220400	S	792	GGGGGGATGGCAACGTGCAAGCAGTGATTTTGATGTTAAGTACTTTAAGT	X	+	154190371-154190420	XqF4	Mus musculus small muscle protein, X-linked (Smpx), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			1010001C09Rik; Csl	1010001C09Rik; Csl
Mus musculus	RefSeq	ILMN_200219	ILMN_249360	LOC672835	XR_004032.1	XR_004032.1		672835	94401339	XR_004032.1	LOC672835		ILMN_1228676	006250181	S	1607	AGGCAGGAGGCCGTGTTTTTGGAGACCCTGATGCTGCCATGCCTCTACTA				16qC1.1	PREDICTED: Mus musculus similar to discs large homolog 7 (LOC672835), mRNA.					
Mus musculus	RefSeq	ILMN_219662	ILMN_219662	SFRS3	NM_013663.3	NM_013663.3		20383	31543687	NM_013663.3	Sfrs3	NP_038691.1	ILMN_2733398	004850382	S	2326	CCATCTAGGTGCCTAAGTGTCATGATGGCATCTCTACCCTGTATTGGACT	17	+	28770793-28770842	17qA3.3	Mus musculus splicing factor, arginine/serine-rich 3 (SRp20) (Sfrs3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence TAS]	AL024116; X16	AL024116; X16
Mus musculus	MEEBO	ILMN_221843	ILMN_221843	LOC243461	IGKV7-33_AF044198_Ig_kappa_variable_7-33_94	XM_144837.3			25050074	XM_144837.3	LOC243461		ILMN_2741142	007550044	S	97	TGACAGCAAGTAAGAAGGTCACCATTAGTTGCACGGCCAGTGAGAGCCTT										
Mus musculus	RefSeq	ILMN_216120	ILMN_216120	4921510H08RIK	NM_025724.2	NM_025724.2		66716	70980540	NM_025724.2	4921510H08Rik	NP_080000.1	ILMN_2667581	004900639	S	1635	CAGGAAGGGAACTGAGAAACGAAATGGAACCGATTTGAGGCTAATATGGA	10	+	97157327-97157376	10qC3	Mus musculus RIKEN cDNA 4921510H08 gene (4921510H08Rik), mRNA.				AV259683	AV259683
Mus musculus	RefSeq	ILMN_216863	ILMN_216863	BARX2	NM_013800.2	NM_013800.2		12023	154937360	NM_013800.2	Barx2	NP_038828.2	ILMN_2676217	002470358	S	704	GGCCCAGTCTCTGGGACTCACTCAGCTGCAAGTGAAGACTTGGTATCAGA				9qA4	Mus musculus BarH-like homeobox 2 (Barx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IDA]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse [goid 14902] [evidence IMP]; The regression phase of the hair cycle during which cell proliferation ceases, the hair follicle shortens, and an anchored club hair is produced [goid 42637] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	2310006E12Rik; Barx2b	2310006E12Rik; Barx2b
Mus musculus	RefSeq	ILMN_186696	ILMN_216863	BARX2	NM_013800.2	NM_013800.2		12023	154937360	NM_013800.2	Barx2	NP_038828.2	ILMN_2437728	003370397	S	1666	GTCAGGTGCCGACAGACCTGATGGTCTTTGGCTTCCCTGCTTCGTGAAGT				9qA4	Mus musculus BarH-like homeobox 2 (Barx2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IDA]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse [goid 14902] [evidence IMP]; The regression phase of the hair cycle during which cell proliferation ceases, the hair follicle shortens, and an anchored club hair is produced [goid 42637] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	2310006E12Rik; Barx2b	2310006E12Rik; Barx2b
Mus musculus	RefSeq	ILMN_213699	ILMN_213699	ACAN	NM_007424.2	NM_007424.2		11595	116875857	NM_007424.2	Acan	NP_031450.2	ILMN_2639818	007610044	S	6905	CCAAGAACAGTACAATGGTTGGTTACTTCGCCTCCAGGGAGAGCTAGGGG	7	+	86259535-86259584	7qD3	Mus musculus aggrecan (Acan), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The chemical reactions and pathways resulting in the formation of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 30166] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Cspg1; cmd; Agc1; Agc	Cspg1; cmd; Agc1; Agc
Mus musculus	RefSeq	ILMN_213699	ILMN_213699	ACAN	NM_007424.2	NM_007424.2		11595	116875857	NM_007424.2	Acan	NP_031450.2	ILMN_2645654	005870438	S	6311	ACCCTCGGGCAGAAGAAAGATCGCTACGAGATCAGCTCCCTGGTGCGGTA	7	+	86258579-86258628	7qD3	Mus musculus aggrecan (Acan), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IDA]	Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The chemical reactions and pathways resulting in the formation of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 30166] [evidence IMP]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Cspg1; cmd; Agc1; Agc	Cspg1; cmd; Agc1; Agc
Mus musculus	Riken	ILMN_204827	ILMN_204827	C530048O03RIK	ri|C530048O03|PX00083N15|AK049777|3217					AK049777	C530048O03Rik		ILMN_2567911	005340465	S	2838	GGGAGACGCCACCTAAAGCTGTGACATTAGATTGTGAGGCCCAGTGCGAA										
Mus musculus	RefSeq	ILMN_190187	ILMN_190187	WIZ	NM_212438.1	NM_212438.1		22404	46909564	NM_212438.1	Wiz	NP_997603.1	ILMN_1221828	000070142	S	4067	CCCCTTTTCACTGTTGCTTTCTATGTATAGCTCCCTAGATCTTTCACTTT	17	-	32491179-32491228	17qB1	Mus musculus widely-interspaced zinc finger motifs (Wiz), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	Riken	ILMN_201603	ILMN_201603	TPMT	ri|0610008H11|R000001H06|AK002335|881					AK002335	Tpmt		ILMN_1217372	002810711	S	597	CAGTACCTTGTGGCTGTCCTTTCTTATGATCCAACAAAACACGCAGGCCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + a thiopurine = S-adenosyl-L-homocysteine + a thiopurine S-methylether [goid 8119] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + a thiopurine = S-adenosyl-L-homocysteine + a thiopurine S-methylether [goid 8119] [evidence ISS]		
Mus musculus	MEEBO	ILMN_209410	ILMN_209410	CD6	scl000423.1_24	NM_009852.1			6753353	NM_009852.1	Cd6		ILMN_2769325	001170246	S	2360	CGAGTCCCCACAGGTCCCCTTGGGTTGACAGGAACACTTTGGGAGAGTGT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_188914	ILMN_313019	1700041I07RIK	XM_001472783.1	XM_001472783.1		73273	149254700	XM_001472783.1	1700041I07Rik	XP_001472833.1	ILMN_1212664	006550279	S	281	TTCACATTTATACATCAGCACCCAACGGACCTCCTTCCCCGACCCTGGTC				5qG3	PREDICTED: Mus musculus RIKEN cDNA 1700041I07 gene (1700041I07Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211743	ILMN_211743	NUP210	NM_018815.1	NM_018815.1		54563	9055313	NM_018815.1	Nup210	NP_061285.1	ILMN_1257579	001230703	S	6926	CACTCAATCTCCCCCGAGAGCTGTTAATGGAGTCTTCCCTGCATTTGTTT	6	-	90963088-90963137	6qD1	Mus musculus nucleoporin 210 (Nup210), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IDA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence ISO]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		Pom210; 9830001L10; gp210; AI836801; gp190	Pom210; 9830001L10; gp210; AI836801; gp190
Mus musculus	RefSeq	ILMN_223759	ILMN_223759	LRRC8C	NM_133897.2	NM_133897.2		100604	118129793	NM_133897.2	Lrrc8c	NP_598658.1	ILMN_1248696	000360240	S	2499	CCTACTTAGACATCAAAGGCAATCACTTTGAAGTCCTCCCTCCCGAGCTG	5	+	106037643-106037692	5qE5	Mus musculus leucine rich repeat containing 8 family, member C (Lrrc8c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AD158; E430036I04Rik; AI326115; fad158	AD158; E430036I04Rik; AI326115; fad158
Mus musculus	RefSeq	ILMN_192792	ILMN_238709	RALGPS2	NM_023884.3	NM_023884.3		78255	142359081	NM_023884.3	Ralgps2	NP_076373.2	ILMN_2705139	002120338	S	1886	TAAACGCCTGAGACAGAAGAGGAGTGCTATTGTTCCCGTGTGGAACCGGG	1	-	158739247-158739294:158739295-158739296	1qH1	Mus musculus Ral GEF with PH domain and SH3 binding motif 2 (Ralgps2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	2210408F11Rik; AU043409; 1810020P17Rik; AW046161; 9130014M22Rik; 4921528G01Rik	2210408F11Rik; AU043409; 1810020P17Rik; AW046161; 9130014M22Rik; 4921528G01Rik
Mus musculus	Riken	ILMN_205471	ILMN_205471	CHD1	ri|A630071A04|PX00147N01|AK042202|1536					AK042202	Chd1		ILMN_1258834	002750682	S	929	TGAAGACTGGCAGATGTCTGGGTCCGGATCTCCATCTCAGTCTGGTTCAG						The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The formation or destruction of chromatin structures [goid 6333] [evidence NAS]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IGI]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence NAS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218378	ILMN_261523	HOOK3	NM_207659.2	NM_207659.2		320191	118131070	NM_207659.2	Hook3	NP_997542.1	ILMN_2694964	006760372	S	1836	GAGTGTTATCCGTACATTAGACCCTAAACAGAATCAAGGAGCAGCACCAG	8	-	27145663-27145709:27148494-27148496	8qA2	Mus musculus hook homolog 3 (Drosophila) (Hook3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]	E330005F07Rik	E330005F07Rik
Mus musculus	RefSeq	ILMN_198785	ILMN_312338	LOC100042964	XM_001479189.1	XM_001479189.1		100042964	149256337	XM_001479189.1	LOC100042964	XP_001479239.1	ILMN_1246712	001030521	S	144	GAACCCCAGAGGCCAAGCTGAGACAAGAGCAACCCGTACTATCTTGATGC	7	-	20918681-20918730	7qA3	PREDICTED: Mus musculus similar to pheromone receptor V3R8 (LOC100042964), mRNA.					
Mus musculus	RefSeq	ILMN_191443	ILMN_320922	LOC664822	XR_032505.1	XR_032505.1		664822	149249102	XR_032505.1	LOC664822		ILMN_1249051	003460653	S	3032	GACAGCGATGGATACAACAGAAGATCTCGGGAACGGACTCAGAAGTATGC				2qA3	PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (LOC664822), misc RNA.					
Mus musculus	RefSeq	ILMN_191443	ILMN_320922	LOC664822	XR_032505.1	XR_032505.1		664822	149249102	XR_032505.1	LOC664822		ILMN_2479118	007320332	S	1199	GGGCTGTGTGTAATGTTTAAAGAGTGAATTTATGAAAATAGAACTTAAAT				2qA3	PREDICTED: Mus musculus similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (LOC664822), misc RNA.					
Mus musculus	RefSeq	ILMN_217415	ILMN_217415	PSMD2	NM_134101.1	NM_134101.1		21762	19882200	NM_134101.1	Psmd2	NP_598862.1	ILMN_2682947	000610446	S	130	GCGAAGGGATGCCGGGGAAAAAGACAAAGAGCAGGAGCTGTCTGAGGAGG	16	+	20651897-20651924:20652317-20652338	16qB1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 (Psmd2), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Modulates the activity of an enzyme [goid 30234] [evidence IEA]	Tex190; AA407121; TEG-190; 9430095H01Rik	Tex190; AA407121; TEG-190; 9430095H01Rik
Mus musculus	RefSeq	ILMN_217415	ILMN_217415	PSMD2	NM_134101.1	NM_134101.1		21762	19882200	NM_134101.1	Psmd2	NP_598862.1	ILMN_2682945	003060082	S	121	GGCAAGGAGCGAAGGGATGCCGGGGAAAAAGACAAAGAGCAGGAGCTGTC	16	+	20651888-20651924:20652317-20652329	16qB1	Mus musculus proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 (Psmd2), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Modulates the activity of an enzyme [goid 30234] [evidence IEA]	Tex190; AA407121; TEG-190; 9430095H01Rik	Tex190; AA407121; TEG-190; 9430095H01Rik
Mus musculus	MEEBO	ILMN_219267	ILMN_219267	2310002F18RIK	scl26322.8.1_52	XM_132218.3			38080335	XM_132218.3	2310002F18Rik		ILMN_2706468	002340538	S	1320	GCTCTAGGTTCTCTCCTAGCAAATAAACTCATTTGTACAACTTTCAGGGC										
Mus musculus	MEEBO	ILMN_193548	ILMN_193548	1810009O10RIK	scl39874.1_89				37574067	NM_197989	1810009O10Rik		ILMN_2498219	005050647	S	4	CGCGTGTCAGGCACCAATAAAAACACAGCAGATGCTTAGACCTGCCTATC										
Mus musculus	MEEBO	ILMN_193548	ILMN_193548	1810009O10RIK	scl39874.1_89				37574067	NM_197989	1810009O10Rik		ILMN_2742293	003140437	S	867	GGTATCGTTCCACCAAGTTGCTGTGATGGCGTGTCTCCACTCGGAGGACT										
Mus musculus	RefSeq	ILMN_196561	ILMN_196561	CYP2E1	NM_021282.2	NM_021282.2		13106	57634519	NM_021282.2	Cyp2e1	NP_067257.1	ILMN_2687014	006280133	S	1454	GGCAGTATCCCACGCGAATTTAAACTCTGTGTCATTCCTCGTTCATGAGA	7	+	147960594-147960641:147960642-147960643	7qF5	Mus musculus cytochrome P450, family 2, subfamily e, polypeptide 1 (Cyp2e1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IDA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]	Cyp2e	Cyp2e
Mus musculus	Riken	ILMN_206824	ILMN_206824	E030030K01RIK	ri|E030030K01|PX00205K14|AK087162|495					AK087162	E030030K01Rik		ILMN_2582952	000610537	S	69	GGCAGAATTCAGGGTTTCCAAAGTGGGAGGTGGTAACGTATCTCCAGGTT										
Mus musculus	MEEBO	ILMN_195076	ILMN_195076	U2AF1	scl0108121.3_5				31340597	NM_024187	U2af1		ILMN_1225725	004730707	S	9	CCGTTGGTTTAATGGACAGCCGATCCATGCAGAGCTGTCCCCAGTAACTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing [goid 50733] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199648	ILMN_243481	EG382843	XM_905000.3	XM_905000.3		382843	149265185	XM_905000.3	EG382843	XP_910093.1	ILMN_1223807	002340168	S	359	AAGCGGGTGAAGGAGAACAACCAGAAGCGCCAGCCTGTGCCACCCAGAGA				14qA1	PREDICTED: Mus musculus predicted gene, EG382843 (EG382843), mRNA.					
Mus musculus	RefSeq	ILMN_209361	ILMN_209361	RNF6	NM_028774.1	NM_028774.1		74132	21311908	NM_028774.1	Rnf6	NP_083050.1	ILMN_2975856	005130129	S	2870	GCTTCGGGGCTTAGACTGCATATGGTACAGTGTAAACAGTGACAAGATCA	5	-	146513840-146513889	5qG3	Mus musculus ring finger protein (C3H2C3 type) 6 (Rnf6), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IGI]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	AA537053; 5730419H05Rik; 1200013I08Rik	AA537053; 5730419H05Rik; 1200013I08Rik
Mus musculus	RefSeq	ILMN_208702	ILMN_208702	RNF113A1	NM_153503.1	NM_153503.1		69942	23943839	NM_153503.1	Rnf113a1	NP_705723.1	ILMN_2588728	002070092	S	995	GAAAGCATCGAGCTGAAGCAGAGGGTGGTGTTTCTGATTCTCTAGAAGAC	X	+	34732332-34732381	XqA3.3	Mus musculus ring finger protein 113A1 (Rnf113a1), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	2810428C21Rik; Rnf113a	2810428C21Rik; Rnf113a
Mus musculus	RefSeq	ILMN_196405	ILMN_196405	1810037O03RIK	XM_129446.2	XM_129446.2			28482235	XM_129446.2	1810037O03Rik		ILMN_1252623	004390278	S	493	GGCCTGTGTATGCTTCCCAGTGCTCTACCGCCAACCTGCGTTCAGTCTGT										
Mus musculus	RefSeq	ILMN_196237	ILMN_250165	GLI2	NM_001081125.1	NM_001081125.1		14633	124487480	NM_001081125.1	Gli2	NP_001074594.1	ILMN_2668750	007210102	S	264	CTGCCCGGCGCCCGAGAGGCCACCTGCATGCTAGAGGCAAACTTTTGTCT	1	-	120949883-120949932	1qE2.3	Mus musculus GLI-Kruppel family member GLI2 (Gli2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IGI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IGI]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IDA]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of a tube over time, from its initial formation to a mature structure. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues including lung and trachea, kidney, the mammary gland, the vascular system and the gastrointestinal and urinary-genital tracts [goid 35295] [evidence IGI]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate [goid 7418] [evidence IMP]; The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate [goid 7418] [evidence IGI]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IGI]; The process by which the anatomical structures of the hindgut are generated and organized. Morphogenesis pertains to the creation of form [goid 7442] [evidence IMP]; The process by which the anatomical structures of the hindgut are generated and organized. Morphogenesis pertains to the creation of form [goid 7442] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IGI]; The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the spinal cord that contributes to the process of a precursor cell becoming capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway [goid 21776] [evidence IGI]; The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the ventral spinal cord that contributes to the commitment of the precursor cell to an interneuron fate [goid 21775] [evidence IGI]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IGI]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IGI]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IMP]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IDA]; The formation of a ventral region of glial cells in the neural tube that provides inductive signals for the specification of neuronal cell types. The floor plate is evident at the ventral midline by the neural fold stage [goid 21508] [evidence IMP]; The developmental process by which the stucture of the notochord is destroyed in an embryo [goid 60032] [evidence IGI]; The process by which the anatomical structures of the spinal cord ventral commissure are generated and organized. Morphogenesis pertains to the creation of form [goid 21965] [evidence IMP]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IMP]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]; The process whose specific outcome is the progression of the ventral region of the spinal cord over time, from its formation to the mature structure. The neurons of the ventral region of the mature spinal cord participate in motor output [goid 21517] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AW546128	AW546128
Mus musculus	RefSeq	ILMN_196237	ILMN_250165	GLI2	NM_001081125.1	NM_001081125.1		14633	124487480	NM_001081125.1	Gli2	NP_001074594.1	ILMN_2522863	005670279	S	6403	CTGGCTCTTGTGGTGTGGACTCATTGCCTGACATAGACCCTAGCTTCCCA	1	-	120730893-120730942	1qE2.3	Mus musculus GLI-Kruppel family member GLI2 (Gli2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IGI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IGI]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IMP]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IDA]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IGI]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process whose specific outcome is the progression of a tube over time, from its initial formation to a mature structure. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues including lung and trachea, kidney, the mammary gland, the vascular system and the gastrointestinal and urinary-genital tracts [goid 35295] [evidence IGI]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IGI]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [evidence IMP]; The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate [goid 7418] [evidence IMP]; The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate [goid 7418] [evidence IGI]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IGI]; The process by which the anatomical structures of the hindgut are generated and organized. Morphogenesis pertains to the creation of form [goid 7442] [evidence IMP]; The process by which the anatomical structures of the hindgut are generated and organized. Morphogenesis pertains to the creation of form [goid 7442] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IGI]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IGI]; The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the spinal cord that contributes to the process of a precursor cell becoming capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway [goid 21776] [evidence IGI]; The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the ventral spinal cord that contributes to the commitment of the precursor cell to an interneuron fate [goid 21775] [evidence IGI]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IGI]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IGI]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IMP]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IGI]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IDA]; The formation of a ventral region of glial cells in the neural tube that provides inductive signals for the specification of neuronal cell types. The floor plate is evident at the ventral midline by the neural fold stage [goid 21508] [evidence IMP]; The developmental process by which the stucture of the notochord is destroyed in an embryo [goid 60032] [evidence IGI]; The process by which the anatomical structures of the spinal cord ventral commissure are generated and organized. Morphogenesis pertains to the creation of form [goid 21965] [evidence IMP]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IMP]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IGI]; The process whose specific outcome is the progression of the ventral region of the spinal cord over time, from its formation to the mature structure. The neurons of the ventral region of the mature spinal cord participate in motor output [goid 21517] [evidence IMP]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	AW546128	AW546128
Mus musculus	RefSeq	ILMN_196756	ILMN_196756	KLRA16	NM_013794.3	NM_013794.3		27424	9256548	NM_013794.3	Klra16	NP_038822.3	ILMN_2724548	004230047	S	729	TGGTCATGGGTTGACAATGGCCCATCTAAACTTGCCTTGAACACAAGGAA					Mus musculus killer cell lectin-like receptor, subfamily A, member 16 (Klra16), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ly-49P; Klra24; Ly49P; Ly49x	Ly-49P; Klra24; Ly49P; Ly49x
Mus musculus	RefSeq	ILMN_196756	ILMN_196756	KLRA16	NM_013794.3	NM_013794.3		27424	9256548	NM_013794.3	Klra16	NP_038822.3	ILMN_3005175	003710673	S	1103	CATGACAGAGCAGAGGGCATCTTCCTTCCCTGTTGAGACTGGACAGATCT					Mus musculus killer cell lectin-like receptor, subfamily A, member 16 (Klra16), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ly-49P; Klra24; Ly49P; Ly49x	Ly-49P; Klra24; Ly49P; Ly49x
Mus musculus	RefSeq	ILMN_217394	ILMN_217394	OLFR116	NM_146632.1	NM_146632.1		258625	33239075	NM_146632.1	Olfr116	NP_666843.1	ILMN_2682722	002900093	S	594	GATGGTTAGTTTCATGACTGCAGTGGCCTTTGCCTGCTTCGTTGGGATTG	17	-	37768477-37768526	17qB1	Mus musculus olfactory receptor 116 (Olfr116), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR218-2	MOR218-2
Mus musculus	RefSeq	ILMN_252902	ILMN_252902	C80008	NM_001033191.1	NM_001033191.1		97243	85701705	NM_001033191.1	C80008	NP_001028363.1	ILMN_2944168	001340202	S	3056	GGGAGTGAGGGAGACACACAGAGTAGTGCTGGAAATTAAGCCAAAACTGG	5	-	97622769-97622818	5qE3	Mus musculus expressed sequence C80008 (C80008), mRNA.					
Mus musculus	RefSeq	ILMN_259595	ILMN_259595	A4GALT	NM_001004150.1	NM_001004150.1		239559	51921294	NM_001004150.1	A4galt	NP_001004150.1	ILMN_3009373	006220349	S	1685	CCTGGGAACACCATCTTTCCTCCCCTGGGACAGTGCTCTGAAGATCTATC	15	-	83057462-83057511	15qE1	Mus musculus alpha 1,4-galactosyltransferase (A4galt), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the plasma membrane [goid 7009] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: beta-D-galactosyl-(1,4)-D-glucosylceramide + UDP-galactose = alpha-D-galactosyl-(1,4)-beta-D-galactosyl-(1,4)-D-glucosylceramide + UDP [goid 50512] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence ISO]		
Mus musculus	RefSeq	ILMN_207463	ILMN_207463	TNRC6B	NM_177124.3	NM_177124.3		213988	67782333	NM_177124.3	Tnrc6b	NP_796098.2	ILMN_3035435	007160435	I	4841	GGGCAGAGCCCATGACCTGATGACCAAATGTTTCTGTTAACTAGCCAGCC	15	+	80749291-80749340	15qE1	Mus musculus trinucleotide repeat containing 6b (Tnrc6b), transcript variant 2, mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2700090M07Rik; D230019K20Rik; A730065C02Rik; MGC28739	2700090M07Rik; D230019K20Rik; A730065C02Rik; MGC28739
Mus musculus	RefSeq	ILMN_207463	ILMN_207463	TNRC6B	NM_177124.3	NM_177124.3		213988	67782333	NM_177124.3	Tnrc6b	NP_796098.2	ILMN_3109164	001440215	A	4380	ATATTGACCCTGAATCTGACCCCTATGTCACCCCAGGAAGTGTGCTAGGG	15	+	80748417-80748466	15qE1	Mus musculus trinucleotide repeat containing 6b (Tnrc6b), transcript variant 2, mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	2700090M07Rik; D230019K20Rik; A730065C02Rik; MGC28739	2700090M07Rik; D230019K20Rik; A730065C02Rik; MGC28739
Mus musculus	RefSeq	ILMN_194444	ILMN_194444	V1RL1	NM_134228.1	NM_134228.1		171262	21717764	NM_134228.1	V1rl1	NP_598989.1	ILMN_1213222	004060048	S	555	GGCCTTCAGTGATGCTATATGTTTGGGACTCATGGTGTGTACCAGTGGAT	7	+	11219490-11219539	7qA1	Mus musculus vomeronasal 1 receptor, L1 (V1rl1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]	V1rd2	V1rd2
Mus musculus	RefSeq	ILMN_219217	ILMN_219217	BLCAP	NM_016916.3	NM_016916.3		53619	84042528	NM_016916.3	Blcap	NP_058612.3	ILMN_2705802	003840324	S	1692	CCTCCCACCAGGAGCTTCCTCATTGCTGCGCACGTAGACTGTACACTATG	2	-	157382436-157382485	2qH1	Mus musculus bladder cancer associated protein homolog (human) (Blcap), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI462828; Bc10; MGC102074	AI462828; Bc10; MGC102074
Mus musculus	RefSeq	ILMN_198707	ILMN_256027	EG627311	XM_891970.1	XM_891970.1		627311	83004720	XM_891970.1	EG627311	XP_897063.1	ILMN_1260305	000990612	S	177	GGAGACCCCAAGGATGGAAGCTGTAAAGGGCTCAGAGTTATCTGGCTACC	X	-	163884237-163884286	XqF5	PREDICTED: Mus musculus predicted gene, EG627311 (EG627311), mRNA.					
Mus musculus	RefSeq	ILMN_222069	ILMN_229231	MYH4	NM_010855.2	NM_010855.2		17884	67189166	NM_010855.2	Myh4	NP_034985.2	ILMN_1241214	004220474	S	5936	GGAGAAATCACAAAATGTGACGTTCTTTGTCACTGTCCTGTATATCACGG	11	+	67073868-67073917	11qB3	Mus musculus myosin, heavy polypeptide 4, skeletal muscle (Myh4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AI506973; MyHC-IIb; Myhsf; MHC2B	AI506973; MyHC-IIb; Myhsf; MHC2B
Mus musculus	RefSeq	ILMN_218153	ILMN_218153	SUV39H1	NM_011514.1	NM_011514.1		20937	6755701	NM_011514.1	Suv39h1	NP_035644.1	ILMN_2692306	001090328	S	2409	GAAATGTACAAAAGGCAAAGATTCTGATGGCTGCCTTGCCCCCTGCTTCC	X	-	7638780-7638829	XqA1.1	Mus musculus suppressor of variegation 3-9 homolog 1 (Drosophila) (Suv39h1), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence TAS]; Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process by which DNA and associated proteins are formed into a compact, orderly structure [goid 6323] [evidence TAS]; Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence TAS]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IGI]	Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IDA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI852103; mIS6; DXHXS7466e; AL022883	AI852103; mIS6; DXHXS7466e; AL022883
Mus musculus	RefSeq	ILMN_197858	ILMN_197858	LOC277666	XM_205433.2	XM_205433.2			38078956	XM_205433.2	LOC277666		ILMN_1252880	001440577	S	1914	AGCAAGCGGTAGTGAAACTGAAAATGCGACCAAGGCCGAGGCCCCACTCG										
Mus musculus	RefSeq	ILMN_218600	ILMN_218600	4833420G17RIK	NM_026127.3	NM_026127.3		67392	40254364	NM_026127.3	4833420G17Rik	NP_080403.3	ILMN_1223318	001090162	S	2506	GCGGAATGATTGTGCAGAACTGACTTCACTTTGATTGTGTTTTGCTCATC	13	+	120274806-120274855	13qD2.3	Mus musculus RIKEN cDNA 4833420G17 gene (4833420G17Rik), mRNA.				C85193; 2210017J06Rik; AW107518; 5730533D17Rik	C85193; 2210017J06Rik; AW107518; 5730533D17Rik
Mus musculus	Riken	ILMN_207018	ILMN_207018	9130024O20RIK	ri|9130024O20|PX00651D17|AK078927|1953					AK078927	9130024O20Rik		ILMN_1241279	002750497	S	1778	CTGAAAGTTCATGTCTGGGCTTCCTACCAGCATCTCTTCCGTGAGGCTGC										
Mus musculus	Riken	ILMN_205508	ILMN_205508	D130051G04RIK	ri|D130051G04|PX00184D22|AK051470|1733					AK051470	D130051G04Rik		ILMN_2573090	000830474	S	1469	AGGCCTTAACTGCCTGCAGCTCTCTGCTTAGGGGTAGAACCCTGGGAGAT										
Mus musculus	RefSeq	ILMN_220455	ILMN_220455	4930431L04RIK	NM_175032.1	NM_175032.1		270049	33239408	NM_175032.1	4930431L04Rik	NP_778197.1	ILMN_2722260	001500390	S	489	CAGCAACAATATTGCTCTAGAGAGGTCTCTGCCAGACATCCGCCATGCCA	8	-	60951641-60951690	8qB3.1	Mus musculus RIKEN cDNA 4930431L04 gene (4930431L04Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	A830023L05	A830023L05
Mus musculus	RefSeq	ILMN_247263	ILMN_247263	SPNS1	NM_023712.1	NM_023712.1		73658	12963794	NM_023712.1	Spns1	NP_076201.1	ILMN_2853212	005220601	S	2079	CAGCCCAGGGAAGAGATGGGAGTCCAGAAACGGGGAAGGGGTGTCCTTTT	7	-	133513625-133513674	7qF3	Mus musculus spinster homolog 1 (Drosophila) (Spns1), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	Spinl; 2210013K02Rik; Spin1	Spinl; 2210013K02Rik; Spin1
Mus musculus	MEEBO	ILMN_192687	ILMN_192687	B230396O12RIK	scl23446.4_26				27370335	NM_172878	B230396O12Rik		ILMN_1224722	004850220	S	10	CCAGTCTCACAGCATACAACACCATAAACTCTAAAGCCTTCAGAGGCAGG								The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192687	ILMN_192687	B230396O12RIK	scl23446.4_26				27370335	NM_172878	B230396O12Rik		ILMN_2630573	005270615	S	2784	ATCTGGCAGAGCTCCTCCCGGCTACCAGGGGCATCACTCAGCACCTCATG								The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209527	ILMN_209527	RARRES2	NM_027852.1	NM_027852.1		71660	21313657	NM_027852.1	Rarres2	NP_082128.1	ILMN_3003130	006060367	S	320	GCTCCAGCAGACCAACTGCCCCAAGAAGGACTGGAAAAAGCCGGAGTGCA	6	-	48501384-48501433	6qB2.3	Mus musculus retinoic acid receptor responder (tazarotene induced) 2 (Rarres2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AI303516; 0610007L05Rik	AI303516; 0610007L05Rik
Mus musculus	Riken	ILMN_205890	ILMN_205890	A530010L13RIK	ri|A530010L13|PX00139B23|AK040666|2629					AK040666	A530010L13Rik		ILMN_1219489	006840500	S	2287	CGGTTGAGCACGTTGGTTATTCTGTCTTTCGGCTCCTGTGAGTGACACCC										
Mus musculus	Riken	ILMN_202113	ILMN_202113	2810440D03RIK	ri|2810440D03|ZX00066J06|AK013274|983					AK013274	2810440D03Rik		ILMN_1229722	004570706	S	585	AAGACAAGAGCACCAGCACCCGGCAGCTCGCCCCGAATAAACCGGATGAT										
Mus musculus	RefSeq	ILMN_260981	ILMN_260981	GPR23	NM_175271.2	NM_175271.2		78134	31341492	NM_175271.2	Gpr23	NP_780480.1	ILMN_2834764	006590630	S	2674	GCACATTTTACCCAAGGCCGCTGCTGAATTTGTGCTCAGGTCGGGAGCAT	X	+	103135086-103135135	XqD	Mus musculus G protein-coupled receptor 23 (Gpr23), mRNA.				LPA4; 5730485F04Rik	LPA4; 5730485F04Rik
Mus musculus	RefSeq	ILMN_184339	ILMN_240547	BAALC	NM_080640.4	NM_080640.4		118452	114205392	NM_080640.4	Baalc	NP_542371.1	ILMN_1222870	004050349	S	227	ACTGTCCTCTAACGGGGTGCTCCGACCTGCAGCCCCGGGTGGAATAGCCA	15	+	38780722-38780771	15qB3.1	Mus musculus brain and acute leukemia, cytoplasmic (Baalc), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810457D07Rik	2810457D07Rik
Mus musculus	RefSeq	ILMN_184339	ILMN_240547	BAALC	NM_080640.4	NM_080640.4		118452	114205392	NM_080640.4	Baalc	NP_542371.1	ILMN_1240833	003180026	S	319	CACAGAACCTCAGCTCAGGCCCTCTGACCCAGAAACAGAATGGCCTCTGG	15	+	38780814-38780863	15qB3.1	Mus musculus brain and acute leukemia, cytoplasmic (Baalc), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2810457D07Rik	2810457D07Rik
Mus musculus	RefSeq	ILMN_188182	ILMN_188182	UBE2J2	NM_021402.5	NM_021402.5		140499	85662416	NM_021402.5	Ube2j2	NP_067377.4	ILMN_3096094	005560010	A	3205	CCACCACCCTACTGCCCTTCACTGGGGCATCAAGCCTTCACAGGACCAAA	4	+	155333416-155333465	4qE2	Mus musculus ubiquitin-conjugating enzyme E2, J2 homolog (yeast) (Ube2j2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	Ubc6p; 5730472G04Rik; AL022923; Ubc6; 2400008G19Rik; 1200007B18Rik	Ubc6p; 5730472G04Rik; AL022923; Ubc6; 2400008G19Rik; 1200007B18Rik
Mus musculus	RefSeq	ILMN_200438	ILMN_200438	LOC386478	XM_359316.1	XM_359316.1			38081942	XM_359316.1	LOC386478		ILMN_1218759	007160114	S	732	ATGGGACCTTGGCTTCTGCAGGCCACAGTGCATTGGCTTCAAGCTCTCTG										
Mus musculus	RefSeq	ILMN_221197	ILMN_221197	4933425O20RIK	NM_025753.2	NM_025753.2		66766	40254512	NM_025753.2	4933425O20Rik	NP_080029.1	ILMN_3026708	002850162	I	882	CCCGGATCCTCTCTTTCTACTTCCAGGAGGAACACACACTCTGGAATGGG	2	+	130098978-130099027	2qF1	Mus musculus RIKEN cDNA 4933425O20 gene (4933425O20Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196873	ILMN_196873	LOC381249	XM_355191.1	XM_355191.1			38049347	XM_355191.1	LOC381249		ILMN_1227363	006280047	S	322	TGGACCTGGACCATTCTATAGGAACAGAAGCAGGTGTACAAGCGGAAGGC										
Mus musculus	RefSeq	ILMN_222846	ILMN_222846	WDR54	NM_023790.1	NM_023790.1		75659	12963826	NM_023790.1	Wdr54	NP_076279.1	ILMN_2755692	007320487	S	928	ACGTCCAGATCAGTGCCCACGCCCGGACCATCTCTGCCCTGGACCTCGCT	6	-	83103262-83103311	6qC3	Mus musculus WD repeat domain 54 (Wdr54), mRNA.				1700030E05Rik; MGC102039	1700030E05Rik; MGC102039
Mus musculus	RefSeq	ILMN_204938	ILMN_221515	TANC2	NM_181071.3	NM_181071.3		77097	124378025	NM_181071.3	Tanc2	NP_851416.2	ILMN_2568767	006180148	S	1512	GACGCCAACAGAGAGCTACCACTCACCCAAGCACCTTCAGCTCACTCATC	11	+	105701938-105701987	11qE1	Mus musculus tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 (Tanc2), mRNA. XM_001000900 XM_001000913 XM_001000922 XM_001004226 XM_001004229 XM_001004235 XM_001004240 XM_903099 XM_903101 XM_903102 XM_911892 XM_922187 XM_922195 XM_922205 XM_922212 XM_922217 XM_922223 XM_984944			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	3526402J09Rik; 5730590C14Rik	3526402J09Rik; 5730590C14Rik
Mus musculus	RefSeq	ILMN_195613	ILMN_221515	TANC2	NM_181071.3	NM_181071.3		77097	124378025	NM_181071.3	Tanc2	NP_851416.2	ILMN_2517149	000110088	S	7149	GCTTTAACTAACAGCTACTAAAGGCTGCTGATTTTCCACGGCTAGAGAAG	11	+	105785907-105785956	11qE1	Mus musculus tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 (Tanc2), mRNA. XM_001000900 XM_001000913 XM_001000922 XM_001004226 XM_001004229 XM_001004235 XM_001004240 XM_903099 XM_903101 XM_903102 XM_911892 XM_922187 XM_922195 XM_922205 XM_922212 XM_922217 XM_922223 XM_984944			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	3526402J09Rik; 5730590C14Rik	3526402J09Rik; 5730590C14Rik
Mus musculus	RefSeq	ILMN_212724	ILMN_212724	LOXL4	NM_053083.2	NM_053083.2		67573	48976072	NM_053083.2	Loxl4	NP_444313.2	ILMN_1255356	006330367	S	2191	TGATACGGTGCCGCTGCAAGTATGATGGACAGCGAGTCTGGTTGCACAAC	19	-	42671997-42672046	19qC3	Mus musculus lysyl oxidase-like 4 (Loxl4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + H2O2 [goid 4720] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	4833426I20Rik	4833426I20Rik
Mus musculus	RefSeq	ILMN_202317	ILMN_212724	LOXL4	NM_053083.2	NM_053083.2		67573	48976072	NM_053083.2	Loxl4	NP_444313.2	ILMN_2548664	004050181	S	3593	GGTCAGGAAGGCTGAGAGGTGAAGGGGAGGAATGAGAAGGTGTGACCCAG	19	-	42668502-42668551	19qC3	Mus musculus lysyl oxidase-like 4 (Loxl4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + H2O2 [goid 4720] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	4833426I20Rik	4833426I20Rik
Mus musculus	RefSeq	ILMN_196613	ILMN_196613	ANKRD34C	NM_207260.2	NM_207260.2		330998	142387048	NM_207260.2	Ankrd34c	NP_997143.1	ILMN_2525024	004060091	S	271	AGTTCAGCTTCTGGCTCTGCTTCAGACAGGCAGAGCCCTCCTGGAGCCAA	9	-	89632993-89633042	9qE3.1	Mus musculus ankyrin repeat domain 34C (Ankrd34c), mRNA.				BB276295; Gm771	BB276295; Gm771
Mus musculus	RefSeq	ILMN_248169	ILMN_248169	GPR111	NM_001033493.1	NM_001033493.1		435529	85702032	NM_001033493.1	Gpr111	NP_001028665.1	ILMN_3161164	001940110	S	2599	GTGTACAGCCATGTACCAATTATGAAGTCCTGGACATCCAACCCAGGGGC	17	-	42173055-42173104	17qB3	Mus musculus G protein-coupled receptor 111 (Gpr111), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	PGR20	PGR20
Mus musculus	RefSeq	ILMN_217633	ILMN_251760	CRAMP1L	XM_983827.1	XM_983827.1		57354	94401766	XM_983827.1	Cramp1l	XP_988921.1	ILMN_1242644	001780441	S	3554	CCCACCCAATGTTTCTGCACTGCTGGACATATCCCTACCTGGTCCACCTG	17	-	25108402-25108451	17qA3.3	PREDICTED: Mus musculus Crm, cramped-like (Drosophila), transcript variant 5 (Cramp1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217633	ILMN_251760	CRAMP1L	XM_983827.1	XM_983827.1		57354	94401766	XM_983827.1	Cramp1l	XP_988921.1	ILMN_1247318	002060050	S	7401	GCCCCCAGCAGGCAGAGCTCAGTGCTGTTTGCTTTGATAATCGTTAAGCC	17	-	25098436-25098485	17qA3.3	PREDICTED: Mus musculus Crm, cramped-like (Drosophila), transcript variant 5 (Cramp1l), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216892	ILMN_216892	DENR	NM_026603.3	NM_026603.3		68184	146134925	NM_026603.3	Denr	NP_080879.1	ILMN_1227602	004640092	S	1618	CAGATGCTCAGCAGAGCCAGGAACTCTTACTCTGCCTATTTACCGTGGGG				5qF	Mus musculus density-regulated protein (Denr), mRNA.		The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	1500003K04Rik	1500003K04Rik
Mus musculus	RefSeq	ILMN_201039	ILMN_201039	LOC381955	XM_355987.1	XM_355987.1			38088108	XM_355987.1	LOC381955		ILMN_2540874	003420619	S	119	GAGGGCTACAAGGTAGCTCACGAGGCTTAATTGAGACGGGAGGGTTCCGG										
Mus musculus	Riken	ILMN_202114	ILMN_202114	2810449K13RIK	ri|2810449K13|ZX00066N08|AK013314|1628					AK013314	2810449K13Rik		ILMN_2547103	005670050	S	1536	AAGCAGCGCTTGAACTCGGGGTACTGCCCCAGACTGAGCACTAAGCAACT										
Mus musculus	MEEBO	ILMN_191902	ILMN_191902	A630072M18RIK	scl0320770.1_163						A630072M18Rik		ILMN_1235926	005560603	S	18	CTCCTCTTTTACTCCAAACCCACTTCTTTAGGACTCGGTGAGGGGAACAC										
Mus musculus	MEEBO	ILMN_195767	ILMN_195767	2810013E07RIK	scl00320093.1_52				31982253	NM_178112	2810013E07Rik		ILMN_1226859	000770546	S	3025	GCAACCCTGAAGAAGTATTACAGCTGGCAGCACAGAGAAGGAAAAAGAAG										
Mus musculus	MEEBO	ILMN_195767	ILMN_195767	2810013E07RIK	scl00320093.1_52				31982253	NM_178112	2810013E07Rik		ILMN_2518510	000240634	S	6	CGTTGCTCTCCCAAGAACGTGGGAAAGAAAAGAATAGCGGAAAAAGACCC										
Mus musculus	RefSeq	ILMN_217387	ILMN_217387	LRRC56	NM_153777.1	NM_153777.1		70552	24418879	NM_153777.1	Lrrc56	NP_722472.1	ILMN_2682650	007040008	S	1844	ATATCTCTTGGCCTAGGTGGGGCCACAGTGAAGTAGGTGGAGCTGGGGCT	7	+	148395659-148395708	7qF5	Mus musculus leucine rich repeat containing 56 (Lrrc56), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mFLJ00101; FLJ00101; BB110509; 5730427C23Rik	mFLJ00101; FLJ00101; BB110509; 5730427C23Rik
Mus musculus	RefSeq	ILMN_214826	ILMN_230889	IGBP1	NM_008784.2	NM_008784.2		18518	51479180	NM_008784.2	Igbp1	NP_032810.2	ILMN_2652384	002470064	S	961	AAAGCCTTGCACAGGATGCGAGAGTGGGACGACTGGAAGGACACCCATCC	X	+	97710961-97711010	XqC3	Mus musculus immunoglobulin (CD79A) binding protein 1 (Igbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism [goid 9607] [evidence IEA]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]		AI115586; C81413; Tap42; AI662457; AW208785; p52; Pc52	AI115586; C81413; Tap42; AI662457; AW208785; p52; Pc52
Mus musculus	RefSeq	ILMN_196449	ILMN_314682	4922501L14RIK	XM_001481326.1	XM_001481326.1		71845	149251892	XM_001481326.1	4922501L14Rik	XP_001481376.1	ILMN_2606152	003450504	S	7597	TGCCCCTGGTGTTGCCCCTCTGCCACAGAGCACTTTAAACACAGTACTGA					PREDICTED: Mus musculus RIKEN cDNA 4922501L14 gene (4922501L14Rik), mRNA.					
Mus musculus	Riken	ILMN_204190	ILMN_204190	C730039N23RIK	ri|C730039N23|PX00087C02|AK050344|3847					AK050344	C730039N23Rik		ILMN_1230710	002760730	S	3493	GGGAGAATGCTGGGAAAGGGGAGAATGTATTCCCTGGTGGTGGTAGTGCA										
Mus musculus	RefSeq	ILMN_198365	ILMN_198365	LOC225602	XM_148875.2	XM_148875.2			38084471	XM_148875.2	LOC225602		ILMN_1250678	002120327	S	336	GACATCATCCAAGTGAGCAGCAGGTTCCTTCGAGGGCTGCAGGAGACAGC										
Mus musculus	MEEBO	ILMN_189241	ILMN_189241	TNPO1	scl00238799.1_113	NM_178716.2			31341325	NM_178716.2	Tnpo1		ILMN_2479932	003800180	S	17	CTATTGCAATTATGGAAAATAGCTTGAAGTTCTCGAGATGAATTTGGAAT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216690	ILMN_216690	TMIGD1	NM_025655.2	NM_025655.2		66601	141802619	NM_025655.2	Tmigd1	NP_079931.1	ILMN_1220817	002850471	S	973	GTTGTTATGACCAATTTGATCTACTTATGGATCTGTGTAATGGGCAAGGG	11	+	76729695-76729744	11qB5	Mus musculus transmembrane and immunoglobulin domain containing 1 (Tmigd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Tmigd; RP23-100P23.6; 2010002A20Rik	Tmigd; RP23-100P23.6; 2010002A20Rik
Mus musculus	RefSeq	ILMN_215291	ILMN_215291	NDUFA9	NM_025358.2	NM_025358.2		66108	142354575	NM_025358.2	Ndufa9	NP_079634.1	ILMN_2657694	006330730	S	848	TACATCTTTGGCATGACCCATCGGACCTTCATCCCTTACCCTTTGCCACT	6	-	126777569-126777618	6qF3	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (Ndufa9), mRNA.	The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]	1010001N11Rik	1010001N11Rik
Mus musculus	Riken	ILMN_207132	ILMN_207132	F630038O13RIK	ri|F630038O13|PL00002I18|AK089210|2407					AK089210	F630038O13Rik		ILMN_2585275	002710494	S	2009	GATTCCGTGGCCTACAGCCTGGGGTTCGACTTGGGAGACTGAGATAACAC										
Mus musculus	RefSeq	ILMN_222394	ILMN_222394	OAF	NM_178644.3	NM_178644.3		102644	118130610	NM_178644.3	Oaf	NP_848759.1	ILMN_2895584	002260494	S	1980	CCCAAGTTCGATTCCTTACATCCGCTTCCAGTGTGGGGAGTGTCACGGAC	9	-	43029719-43029768	9qA5.1	Mus musculus OAF homolog (Drosophila) (Oaf), mRNA.				AL024221; D9Ucla1; D130038B21Rik	AL024221; D9Ucla1; D130038B21Rik
Mus musculus	RefSeq	ILMN_217194	ILMN_217194	PLA2G15	NM_133792.2	NM_133792.2		192654	31543133	NM_133792.2	Pla2g15	NP_598553.1	ILMN_1257060	003170577	S	2542	GAAGCTGGACCACACTGCCTTCCCATATCGTTTCTGATGCTGGACTTCCC	8	+	108688451-108688500	8qD3	Mus musculus phospholipase A2, group XV (Pla2g15), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine [goid 4607] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate; does not require Ca2+ [goid 47499] [evidence IDA]	ACS; Lpla2; C87498; LLPL	ACS; Lpla2; C87498; LLPL
Mus musculus	RefSeq	ILMN_199143	ILMN_254001	A430084P05RIK	NM_001045526.2	NM_001045526.2		327957	142382084	NM_001045526.2	A430084P05Rik	NP_001038991.1	ILMN_2534201	005390088	S	826	CTCTACCCCAAGATTCTGAGGATGTGGCCTTGGCACCTTTGTGGAGGAAG	11	-	70605186-70605235	11qB3	Mus musculus RIKEN cDNA A430084P05 gene (A430084P05Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_217491	ILMN_217491	6330548G22RIK	NM_029532.2	NM_029532.2		76167	31981324	NM_029532.2	6330548G22Rik	NP_083808.1	ILMN_2935389	005670088	S	635	AAGGGAAAGGAGGGAGCGATCTCGATCTAGGGACAGACACTGGGACCCCA	5	+	124940674-124940723	5qF	Mus musculus RIKEN cDNA 6330548G22 gene (6330548G22Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_217491	ILMN_217491	6330548G22RIK	NM_029532.2	NM_029532.2		76167	31981324	NM_029532.2	6330548G22Rik	NP_083808.1	ILMN_2935386	003140465	S	1013	GTCAACCCAGCACTTGGGAGTTGGAGGCAGAAGGATGGAAAGAGAGAGGG	5	+	124941052-124941101	5qF	Mus musculus RIKEN cDNA 6330548G22 gene (6330548G22Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_211867	ILMN_250817	FZD9	XM_916560.2	XM_916560.2		14371	94375491	XM_916560.2	Fzd9	XP_921653.1	ILMN_2620255	004260673	S	1757	CTAAGACAGACCCCTCTCTGGAGAACCCCACACACCTCTAGAACATAGGC				5qG2	PREDICTED: Mus musculus frizzled homolog 9 (Drosophila) (Fzd9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IMP]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 4926] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210814	ILMN_210814	GORASP2	NM_027352.3	NM_027352.3		70231	142349892	NM_027352.3	Gorasp2	NP_081628.2	ILMN_2716464	004880411	S	2185	CGGTATCGCGGCAATAAACTCCAGTCGCTTTACGGTCTCCTTGTGTTCTA	2	+	70529747-70529796	2qC2	Mus musculus golgi reassembly stacking protein 2 (Gorasp2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9430094F20Rik; p59; AW552058; 2410043M02Rik; 5730520M13Rik; 0610011A07Rik; GRS2; GRASP55; GOLPH2	9430094F20Rik; p59; AW552058; 2410043M02Rik; 5730520M13Rik; 0610011A07Rik; GRS2; GRASP55; GOLPH2
Mus musculus	RefSeq	ILMN_210814	ILMN_210814	GORASP2	NM_027352.3	NM_027352.3		70231	142349892	NM_027352.3	Gorasp2	NP_081628.2	ILMN_2609457	003420300	S	969	CCGCCACAAGTAAACCAGTCCCTTGCTTCTATGCCACCAATGAACCCAGC	2	+	70526466-70526515	2qC2	Mus musculus golgi reassembly stacking protein 2 (Gorasp2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9430094F20Rik; p59; AW552058; 2410043M02Rik; 5730520M13Rik; 0610011A07Rik; GRS2; GRASP55; GOLPH2	9430094F20Rik; p59; AW552058; 2410043M02Rik; 5730520M13Rik; 0610011A07Rik; GRS2; GRASP55; GOLPH2
Mus musculus	RefSeq	ILMN_210814	ILMN_210814	GORASP2	NM_027352.3	NM_027352.3		70231	142349892	NM_027352.3	Gorasp2	NP_081628.2	ILMN_1238654	005910601	S	199	CCCCAGGACACAGAGCTGGACTGGAGCCTTTCTTTGATTTTATTGTTTCT	2	+	70514535-70514584	2qC2	Mus musculus golgi reassembly stacking protein 2 (Gorasp2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	9430094F20Rik; p59; AW552058; 2410043M02Rik; 5730520M13Rik; 0610011A07Rik; GRS2; GRASP55; GOLPH2	9430094F20Rik; p59; AW552058; 2410043M02Rik; 5730520M13Rik; 0610011A07Rik; GRS2; GRASP55; GOLPH2
Mus musculus	RefSeq	ILMN_211320	ILMN_211320	2810043G22RIK	XM_149291.6	XM_149291.6		229146	94369471	XM_149291.6	2810043G22Rik	XP_149291.4	ILMN_2614620	001050450	S	1286	GTTCAATGTTAAGCCATGATGCATTCTGAATGAGTGATTGATGCCCAAGA	3	-	23995504-23995553		PREDICTED: Mus musculus RIKEN cDNA 2810043G22 gene (2810043G22Rik), mRNA.					
Mus musculus	MEEBO	ILMN_222752	ILMN_222752	GNA13	scl40776.5_573	NM_010303.2			40254581	NM_010303.2	Gna13		ILMN_2754253	002490201	S	2559	CAGAGCTGGGCCCTAGTGTATGTATACTTGAGAGACCTGACTTGTCCTGG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IMP]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence ISA]		
Mus musculus	MEEBO	ILMN_191757	ILMN_191757	V2R9	scl0022315.2_294				6678546	NM_009495	V2r9		ILMN_2522867	007050161	S	2	CATGGGACTATCACTTTTGCACACCACAGAGTTGAGATTCCTAAATTAAA										
Mus musculus	RefSeq	ILMN_211178	ILMN_260623	R3HDM1	NM_181750.2	NM_181750.2		226412	50845429	NM_181750.2	R3hdm1	NP_861415.2	ILMN_2675914	006860241	S	663	TTCGGAGCCTTGCAGTATGTGAAGAATCTCCACCACCCCCTGCAGCAGAG	1	+	130059368-130059417	1qE4	Mus musculus R3H domain 1 (binds single-stranded nucleic acids) (R3hdm1), mRNA.				R3hdm	R3hdm
Mus musculus	RefSeq	ILMN_211178	ILMN_260623	R3HDM1	NM_181750.2	NM_181750.2		226412	50845429	NM_181750.2	R3hdm1	NP_861415.2	ILMN_2759868	002190519	S	1729	CCAGTCTTCTCATGGCGCACCTGTCATCTACCCGGCAGCCAGCAATCACA	1	+	130081059-130081108	1qE4	Mus musculus R3H domain 1 (binds single-stranded nucleic acids) (R3hdm1), mRNA.				R3hdm	R3hdm
Mus musculus	RefSeq	ILMN_260623	ILMN_260623	R3HDM1	NM_181750.2	NM_181750.2		226412	50845429	NM_181750.2	R3hdm1	NP_861415.2	ILMN_3001855	004540400	S	4425	TAGGTAGTGTGGCCGTTAAGTGTAAGGTAAATTATGTTCTCGATGCCTCC	1	+	130133925-130133974	1qE4	Mus musculus R3H domain 1 (binds single-stranded nucleic acids) (R3hdm1), mRNA.				R3hdm	R3hdm
Mus musculus	MEEBO	ILMN_219919	ILMN_219919	5033403J15RIK	scl075964.2_56				51770800	XM_484707	5033403J15Rik		ILMN_2715216	004250044	S	4985	AGCCTTGCTGGCAATACTCCTGTTAAGCCATTAGTCTAAAGATCCTACCT										
Mus musculus	RefSeq	ILMN_200756	ILMN_227009	LOC674960	XR_004709.2	XR_004709.2		674960	149270898	XR_004709.2	LOC674960		ILMN_2539893	003460164	S	146	GCTGAGAGGCAAAATGTCCTTATATGCATTCTTTGTGCAAATTTGCCGGG					PREDICTED: Mus musculus similar to high-mobility group box 1 (LOC674960), misc RNA.					
Mus musculus	RefSeq	ILMN_200903	ILMN_200903	LOC381898	XM_355915.1	XM_355915.1			38086930	XM_355915.1	LOC381898		ILMN_2540407	007380746	S	436	TCCAGGGTGGAGATGAAGCCCAAATAGAGGAGGCTTGGCCTGAAGGTCTA										
Mus musculus	MEEBO	ILMN_219371	ILMN_219371	4933428D01RIK	scl45682.5.1_217	XM_127662.2			23602056	XM_127662.2	4933428D01Rik		ILMN_2707902	003940598	S	524	GGGTCTACTGATTCTCTGGTCTGCTAGCCATAACTACCTTTAATCATGTG										
Mus musculus	MEEBO	ILMN_210095	ILMN_210095	AI255170	scl49761.17.1_23	XM_128733.4			38082722	XM_128733.4	AI255170		ILMN_2602161	004150041	S	2777	CAGATACCGAGACTTTCCACGGCCAGATCACCGCTTCCATGACTTTGATC										
Mus musculus	RefSeq	ILMN_223805	ILMN_254523	OLFR64	NM_013617.3	NM_013617.3		18366	134948614	NM_013617.3	Olfr64	NP_038645.2	ILMN_1256949	003830086	S	1159	GCTATAGGACTTGGGGTGTTACTGAGGGGCTTTTTGTCTCTTGTGCCCCC	7	-	111041777-111041826	7qE3	Mus musculus olfactory receptor 64 (Olfr64), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	5'[b]2; 5'beta2; ORL533; MOR1-1; MOR1-2	5'[b]2; 5'beta2; ORL533; MOR1-1; MOR1-2
Mus musculus	RefSeq	ILMN_259163	ILMN_259163	CCDC111	NM_001001184.1	NM_001001184.1		408022	47564099	NM_001001184.1	Ccdc111	NP_001001184.1	ILMN_2949886	002120184	S	3686	GAGCCTGGAGAGAAAGATGTGTGACCTGGGCGAACTGCCTGTGTCTGAGG	8	-	47661009-47661058	8qB1.1	Mus musculus coiled-coil domain containing 111 (Ccdc111), mRNA.		The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of a short RNA polymer, usually 4-15 nucleotides long, using one strand of unwound DNA as a template; the RNA then serves as a primer from which DNA polymerases extend synthesis [goid 6269] [evidence IEA]	Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. Catalyzed by a DNA-directed RNA polymerase that forms a complex with alpha DNA polymerase [goid 3896] [evidence IEA]	BC065112; MGC86034	BC065112; MGC86034
Mus musculus	RefSeq	ILMN_203913	ILMN_259163	CCDC111	NM_001001184.1	NM_001001184.1		408022	47564099	NM_001001184.1	Ccdc111	NP_001001184.1	ILMN_1242777	004760431	S	2971	GCCTGGATCCCTTCTGATGTGCAGTAACCAGGACTCACCTTTCCCGTTCC	8	-	47661724-47661773	8qB1.1	Mus musculus coiled-coil domain containing 111 (Ccdc111), mRNA.		The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of a short RNA polymer, usually 4-15 nucleotides long, using one strand of unwound DNA as a template; the RNA then serves as a primer from which DNA polymerases extend synthesis [goid 6269] [evidence IEA]	Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. Catalyzed by a DNA-directed RNA polymerase that forms a complex with alpha DNA polymerase [goid 3896] [evidence IEA]	BC065112; MGC86034	BC065112; MGC86034
Mus musculus	RefSeq	ILMN_210063	ILMN_210063	CHMP4C	NM_025519.2	NM_025519.2		66371	133893355	NM_025519.2	Chmp4c	NP_079795.1	ILMN_2601851	002360593	S	1440	TGAGCACTTGGGGGCGGTGCTCCAGGGGGTGTGGTCAGGAAGCTGAGTGA	3	+	10390655-10390704	3qA1	Mus musculus chromatin modifying protein 4C (Chmp4c), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		2010012P02Rik; 2210015K02Rik; MGC144773; MGC144772; 2310010I16Rik; Shax3	2010012P02Rik; 2210015K02Rik; MGC144773; MGC144772; 2310010I16Rik; Shax3
Mus musculus	RefSeq	ILMN_210493	ILMN_210493	ACOT7	NM_133348.1	NM_133348.1		70025	19923051	NM_133348.1	Acot7	NP_579926.1	ILMN_2606180	002470315	S	898	TGTCATCACCATCTCCGGACGCATGACCTTCACAAGCAATAAGTCCATGG	4	+	151634959-151635008	4qE2	Mus musculus acyl-CoA thioesterase 7 (Acot7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 9062] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IDA]	LACH1; AU015130; AU042212; Bach; ACH1; 2410041A17Rik; ACT; CTE-II; AW557066	LACH1; AU015130; AU042212; Bach; ACH1; 2410041A17Rik; ACT; CTE-II; AW557066
Mus musculus	RefSeq	ILMN_210493	ILMN_210493	ACOT7	NM_133348.1	NM_133348.1		70025	19923051	NM_133348.1	Acot7	NP_579926.1	ILMN_2660182	007610392	S	214	GCGTCCAGATGATGCCAATGTGGCTGGCAATGTTCATGGAGGGACCATTC	4	+	151580879-151580928	4qE2	Mus musculus acyl-CoA thioesterase 7 (Acot7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 9062] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IDA]	LACH1; AU015130; AU042212; Bach; ACH1; 2410041A17Rik; ACT; CTE-II; AW557066	LACH1; AU015130; AU042212; Bach; ACH1; 2410041A17Rik; ACT; CTE-II; AW557066
Mus musculus	RefSeq	ILMN_210493	ILMN_210493	ACOT7	NM_133348.1	NM_133348.1		70025	19923051	NM_133348.1	Acot7	NP_579926.1	ILMN_2807084	006840392	S	1017	CCTTCTTCACCTACGTGTCCCTGAACCAGGAGGGCAAGCCAATGCCTGTG	4	+	151635078-151635127	4qE2	Mus musculus acyl-CoA thioesterase 7 (Acot7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 9062] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IDA]	LACH1; AU015130; AU042212; Bach; ACH1; 2410041A17Rik; ACT; CTE-II; AW557066	LACH1; AU015130; AU042212; Bach; ACH1; 2410041A17Rik; ACT; CTE-II; AW557066
Mus musculus	RefSeq	ILMN_210493	ILMN_210493	ACOT7	NM_133348.1	NM_133348.1		70025	19923051	NM_133348.1	Acot7	NP_579926.1	ILMN_2632264	000730129	S	1275	GAGAGCTGGTGTTGTGTGAAGTGTTGAGTGGCAGTGTTCCCTATGGCCCA	4	+	151645779-151645828	4qE2	Mus musculus acyl-CoA thioesterase 7 (Acot7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 9062] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IDA]	LACH1; AU015130; AU042212; Bach; ACH1; 2410041A17Rik; ACT; CTE-II; AW557066	LACH1; AU015130; AU042212; Bach; ACH1; 2410041A17Rik; ACT; CTE-II; AW557066
Mus musculus	Riken	ILMN_203287	ILMN_203287	9530020O07RIK	ri|9530020O07|PX00111H12|AK035350|1983					AK035350	9530020O07Rik		ILMN_1213116	000990519	S	1683	TCATGGAAGCCGGGGCCAAGATAAAGGTGAGGTCTGTTCTCTGTGAGGTC										
Mus musculus	RefSeq	ILMN_212837	ILMN_212837	APLF	NM_024251.3	NM_024251.3		72103	142361671	NM_024251.3	Aplf	NP_077213.2	ILMN_2630884	000620687	S	3032	GCCACATGCTTTCTTCGTATTTGTGAGTCTCTCCATGTAATTGCACAGGG	6	-	87578468-87578517	6qD1	Mus musculus aprataxin and PNKP like factor (Aplf), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI452191	AI452191
Mus musculus	RefSeq	ILMN_197852	ILMN_197852	LOC277744	XM_204108.2	XM_204108.2			28498502	XM_204108.2	LOC277744		ILMN_2529591	000610646	S	806	CCCCCCACTGCCGCACCACGGTTTTCTTGAAGCTTGGAAAGGGAGAGAGT										
Mus musculus	RefSeq	ILMN_199091	ILMN_226248	PDSS2	XM_988312.1	XM_988312.1		71365	94388117	XM_988312.1	Pdss2	XP_993406.1	ILMN_2534018	001070041	S	605	GGAAAAAGGTCACGCGGTTTTCACTTGTCACGCCAGAGCACACTTGAGGC				10qB2	PREDICTED: Mus musculus prenyl (solanesyl) diphosphate synthase, subunit 2, transcript variant 9 (Pdss2), mRNA.		The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated nonidentical subunits [goid 51290] [evidence IPI]; The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IDA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IDA]; Any process that modulates the levels of body fluids [goid 50878] [evidence IMP]	Catalysis of the reaction: all-trans-octaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-nonaprenyl diphosphate [goid 50347] [evidence IPI]; Catalysis of the reaction: all-trans-hexaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-heptaprenyl diphosphate [goid 10] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IDA]		
Mus musculus	RefSeq	ILMN_239373	ILMN_239373	LRRC2	NM_028838.1	NM_028838.1		74249	58037352	NM_028838.1	Lrrc2	NP_083114.1	ILMN_3003656	002760301	S	2980	CTAGCCAGGCCTACCGGAAGCTGTTGTCTTGAATAGGAGATAGAGCCTCG	9	+	110885893-110885942	9qF3	Mus musculus leucine rich repeat containing 2 (Lrrc2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4933431K03Rik; 2400002D05Rik	4933431K03Rik; 2400002D05Rik
Mus musculus	MEEBO	ILMN_222932	ILMN_222932	BCL9L	scl37031.1_4	NM_030256.1			13384995	NM_030256.1	Bcl9l		ILMN_1250469	004150575	S	1286	TGGACTGTCACCTTGCCGGCGGCGCTTCAGGTCCGTTTCTCGCCTTCCCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_209836	ILMN_209836	E030010A14RIK	NM_183160.3	NM_183160.3		226040	142387742	NM_183160.3	E030010A14Rik	NP_898983.1	ILMN_2599686	004900440	S	504	AGATCATAGCAGATGCAGGGGCTCCAGCGAAGGCACAGGATGCTGAGGAG	19	+	24752193-24752242	19qB	Mus musculus RIKEN cDNA E030010A14 gene (E030010A14Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC107144	MGC107144
Mus musculus	RefSeq	ILMN_252828	ILMN_252828	COIL	NM_181329.2	NM_181329.2		12812	31341549	NM_181329.2	Coil	NP_851846.1	ILMN_3096250	006400068	A	2325	CAGCCTGCAGTGGGGAGGCATCCTTGTTGTATTGTGTGGAGGAGCGCTGG	11	+	88807440-88807489	11qC	Mus musculus coilin (Coil), mRNA.	A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [evidence IDA]; The nucleus of the female germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1674] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of an oxidation-reduction (redox) reaction that interconverts reduced sulfide groups and oxidized disulfide bonds in a substrate [goid 15036] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p80-coilin; C79982; Cln80; MGC37472	p80-coilin; C79982; Cln80; MGC37472
Mus musculus	Riken	ILMN_205999	ILMN_205999	D930011B20RIK	ri|D930011B20|PX00201P01|AK053002|1392					AK053002	D930011B20Rik		ILMN_1249709	004850053	S	1230	GTGTCCACAGGTAAGCAACAATTCCTGCCCTCAGGAGGCTCTCAGCTCTG										
Mus musculus	RefSeq	ILMN_212257	ILMN_212257	CLDN15	NM_021719.3	NM_021719.3		60363	146134998	NM_021719.3	Cldn15	NP_068365.1	ILMN_1245622	007210382	S	885	TCAGCTTCGGTAAATATGGCAAAAACGCATACGTGTAGGAAGCTCTGGCC				5qG2	Mus musculus claudin 15 (Cldn15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	BB107105; 2210009B08Rik	BB107105; 2210009B08Rik
Mus musculus	RefSeq	ILMN_212257	ILMN_212257	CLDN15	NM_021719.3	NM_021719.3		60363	146134998	NM_021719.3	Cldn15	NP_068365.1	ILMN_2674906	005050537	S	1070	TATCTGGCACTCAGCCTCTCCCTGGAACAGAAGCTTCAGGGGCAACTTGC				5qG2	Mus musculus claudin 15 (Cldn15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	BB107105; 2210009B08Rik	BB107105; 2210009B08Rik
Mus musculus	RefSeq	ILMN_211213	ILMN_211213	CTDP1	NM_026295.2	NM_026295.2		67655	34328279	NM_026295.2	Ctdp1	NP_080571.2	ILMN_2613659	004920537	S	2584	CCCTGCTAGAAGAAAGCGACAACCCAGTATGTCCGAGGCAATGCCGCTGT	18	-	80630945-80630994	18qE3	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 (Ctdp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW553592; 4930563P03Rik	AW553592; 4930563P03Rik
Mus musculus	RefSeq	ILMN_211213	ILMN_211213	CTDP1	NM_026295.2	NM_026295.2		67655	34328279	NM_026295.2	Ctdp1	NP_080571.2	ILMN_2650492	000520746	S	3133	AGGAAAGTCTACTTTTTTAAGCAGCAAAGTGTTCTGAGGAGTTGGTGTGT	18	-	80605200-80605249	18qE3	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 (Ctdp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW553592; 4930563P03Rik	AW553592; 4930563P03Rik
Mus musculus	RefSeq	ILMN_211213	ILMN_211213	CTDP1	NM_026295.2	NM_026295.2		67655	34328279	NM_026295.2	Ctdp1	NP_080571.2	ILMN_2953351	001450397	S	3400	GTAAAACAGCAGTGTACATATGTGTGTACAGGACACCAAGACTCGCAGGC	18	-	80604933-80604982	18qE3	Mus musculus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 (Ctdp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AW553592; 4930563P03Rik	AW553592; 4930563P03Rik
Mus musculus	RefSeq	ILMN_212222	ILMN_212222	AGPAT5	NM_026792.3	NM_026792.3		52123	127139102	NM_026792.3	Agpat5	NP_081068.1	ILMN_1250939	002630544	S	3703	GCTTGCAGCTTAGGGGCTGCAGTTGTTCTCCTTCATAAGACTGCCATCCG	8	+	18884287-18884336	8qA1.3	Mus musculus 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) (Agpat5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IDA]	1110013A05Rik; D8Ertd319e	1110013A05Rik; D8Ertd319e
Mus musculus	Riken	ILMN_203051	ILMN_203051	A930004F07RIK	ri|A930004F07|PX00065C18|AK044263|1798					AK044263	A930004F07Rik		ILMN_2554360	006900128	S	1160	GACAAATCTGGCTCTACTGGAAAGTCAATGCCCCCTGCCCTTGAGTGGAG										
Mus musculus	Riken	ILMN_206097	ILMN_206097	E530004N13RIK	ri|E530004N13|PX00319I21|AK054553|3477					AK054553	E530004N13Rik		ILMN_2577520	001450592	S	2275	CCCTGGTCTGTCATCAACTTGCAGCCAAGAGAAATGGGCCTAAGCTTCCC										
Mus musculus	RefSeq	ILMN_248115	ILMN_248115	GJA6	NM_001001496.1	NM_001001496.1		414089	47894400	NM_001001496.1	Gja6	NP_001001496.1	ILMN_2946541	003610707	S	1676	GGAGAGCAGAAGAAGGTGAAGGGGGTTGCCTAATTCCTGTGTAATTGACC	X	-	157340299-157340348	XqF4	Mus musculus gap junction protein, alpha 6 (Gja6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]		Cnx33; Gja-6; A530015O12Rik	Cnx33; Gja-6; A530015O12Rik
Mus musculus	RefSeq	ILMN_200823	ILMN_252967	LOC632503	XM_989377.1	XM_989377.1		632503	94408850	XM_989377.1	LOC632503	XP_994471.1	ILMN_2540132	002470605	S	91	CAGAAGATCCGATGTCTTGGAGGAAGCTTGGTGTCTTTGGAGGTGAAGGA					PREDICTED: Mus musculus similar to Aldehyde dehydrogenase family 7 member A1 (Antiquitin-1) (LOC632503), mRNA.					
Mus musculus	RefSeq	ILMN_213708	ILMN_241974	NBEAL2	XM_977572.2	XM_977572.2		235627	149260327	XM_977572.2	Nbeal2	XP_982666.2	ILMN_2639934	003310239	S	6575	ACCTGTCCAAACCCATCGGTGTGGTGAATCCCAAGCATGCCCAGCTTGTG	9	-	110531627-110531676	9qF2	PREDICTED: Mus musculus neurobeachin-like 2 (Nbeal2), mRNA.					
Mus musculus	RefSeq	ILMN_184793	ILMN_256413	LOC624824	XM_889366.2	XM_889366.2		624824	94386022	XM_889366.2	LOC624824	XP_894459.2	ILMN_1224687	004250072	S	224	CCCTGATGCCACATATTGCTCACCAGAGGCTATGCATTCCAGACAATTCC	9	-	20152292-20152341	9qA3	PREDICTED: Mus musculus similar to zinc finger protein 426 (LOC624824), mRNA.					
Mus musculus	Riken	ILMN_203713	ILMN_203713	9630040P08RIK	ri|9630040P08|PX00116J22|AK036145|3417					AK036145	9630040P08Rik		ILMN_1226698	002480603	S	3218	CCTCCAGGGCAGAAGAAGCCTCAATCCCTTGCCTGGTGAGAAAGAGACCG										
Mus musculus	MEEBO	ILMN_186245	ILMN_186245	DMD	scl54802.1.1_92				6681202	NM_007868	Dmd		ILMN_2433876	000360367	S	18	TGGATGATACTGTGACTTTTTCGTGCAGATACCTCTGTTCAGTGTACCAA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IDA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IDA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IDA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with the enzyme nitric-oxide synthase [goid 50998] [evidence IPI]		
Mus musculus	RefSeq	ILMN_222067	ILMN_239262	LRCH2	XM_897666.2	XM_897666.2		210297	94408342	XM_897666.2	Lrch2	XP_902759.1	ILMN_1215518	002450189	S	4265	GAGGTCCTTGACACAGCAGTTCAACTATTATTGTGCCAAAAGGCAGTAAC	X	-	142717261-142717310	XqF2	PREDICTED: Mus musculus leucine-rich repeats and calponin homology (CH) domain containing 2, transcript variant 2 (Lrch2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209874	ILMN_209874	MCPT8	NM_008572.1	NM_008572.1		17231	6678839	NM_008572.1	Mcpt8	NP_032598.1	ILMN_1235399	002650382	S	702	CCAGCTTTATGCCTTGGATTCGGAAAACAATGAAACTCCTGCAACAACCC	14	-	56701087-56701136	14qC3	Mus musculus mast cell protease 8 (Mcpt8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	BB139338; MMCP-8	BB139338; MMCP-8
Mus musculus	RefSeq	ILMN_217287	ILMN_234677	LMTK2	NM_001081109.1	NM_001081109.1		231876	124487400	NM_001081109.1	Lmtk2	NP_001074578.1	ILMN_1219647	006370139	S	6569	GCCTGGGATAGAGTTACTGACATTTGAGGGCTGGCCATCTTTCACCATGC	5	+	144947528-144947577	5qG2	Mus musculus lemur tyrosine kinase 2 (Lmtk2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence ISA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence ISA]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence ISA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	A330101P12Rik; cprk; 2900041G10Rik; aatyk2; KPI-2; BREK; KPI2	A330101P12Rik; cprk; 2900041G10Rik; aatyk2; KPI-2; BREK; KPI2
Mus musculus	RefSeq	ILMN_217287	ILMN_234677	LMTK2	NM_001081109.1	NM_001081109.1		231876	124487400	NM_001081109.1	Lmtk2	NP_001074578.1	ILMN_2681474	002030376	S	7797	AACGTGTGGCGTTTGGTTACTGAAGCCTGCTCAGGCGAAGCTGGGTCTTG	5	+	144948756-144948805	5qG2	Mus musculus lemur tyrosine kinase 2 (Lmtk2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence ISA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence ISA]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence ISA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	A330101P12Rik; cprk; 2900041G10Rik; aatyk2; KPI-2; BREK; KPI2	A330101P12Rik; cprk; 2900041G10Rik; aatyk2; KPI-2; BREK; KPI2
Mus musculus	RefSeq	ILMN_211784	ILMN_211784	CMTM8	NM_027294.2	NM_027294.2		70031	142373686	NM_027294.2	Cmtm8	NP_081570.1	ILMN_1249046	003830427	S	562	GGCAGTGCCTTCGTCTTGTACTTCTCAGCTGCCATAGTGGACGCATCTTC	9	-	114699807-114699856	9qF3	Mus musculus CKLF-like MARVEL transmembrane domain containing 8 (Cmtm8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	AA408515; Cklfsf8; 2700018N07Rik	AA408515; Cklfsf8; 2700018N07Rik
Mus musculus	RefSeq	ILMN_223029	ILMN_223029	CANT1	NM_029502.2	NM_029502.2		76025	71043950	NM_029502.2	Cant1	NP_083778.2	ILMN_3079317	003610743	I	201	AGGAGAGGTCTAGAGAGTGGAAGAGGCAGGTGTCCCGTTGCCACCCACCT	11	-	118278993-118279042	11qE2	Mus musculus calcium activated nucleotidase 1 (Cant1), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]	The chemical reactions and pathways resulting in the breakdown of a ribonucleoside diphosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with diphosphate on its glycose moiety [goid 9191] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments [goid 16462] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]; Catalysis of the reaction: GDP + H2O = GMP + phosphate [goid 4382] [evidence ISO]; Catalysis of the reaction: UDP + H2O = UMP + phosphate [goid 45134] [evidence ISO]	Entpd8; D11Bwg0554e; SCAN-1; Shapy; 5830420C20Rik; Apy1h	Entpd8; D11Bwg0554e; SCAN-1; Shapy; 5830420C20Rik; Apy1h
Mus musculus	Riken	ILMN_205299	ILMN_205299	CUL2	ri|4732406K14|PX00313O03|AK028589|2814					AK028589	Cul2		ILMN_1238236	001500333	S	1	GAGTAATGGCAGCGCTGTGAGCCGGGGAACGCGAGCTGACAGCCGCCGCC						Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_217335	ILMN_217335	2900073G15RIK	scl067268.1_40	NM_026064.1			13385561	NM_026064.1	2900073G15Rik		ILMN_2682046	005050711	S	1257	CTCGTCCATGTAAACTTCCTGCCACCGAAACTAGCAGCCGCTGAGCACAC										
Mus musculus	RefSeq	ILMN_209468	ILMN_209468	OLFR259	NM_146770.2	NM_146770.2		258766	110735417	NM_146770.2	Olfr259	NP_666981.2	ILMN_2596049	004040142	S	889	GTAAAGGAAGCAGCCAAGAAGTTAATTTGTGGGGAGAGAAATGCCCCTTG	2	-	86947604-86947653	2qD	Mus musculus olfactory receptor 259 (Olfr259), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR172-3	MOR172-3
Mus musculus	RefSeq	ILMN_214678	ILMN_214678	TDRD3	NM_172605.2	NM_172605.2		219249	31982086	NM_172605.2	Tdrd3	NP_766193.2	ILMN_2650683	002710253	S	2399	CATCCTGGAAGCCCACTGATAGATTTTCCACTTCTTCAGAGAGAGACTCA	14	+	87945096-87945145	14qE1	Mus musculus tudor domain containing 3 (Tdrd3), mRNA.				6720468N18; 4732418C03Rik	6720468N18; 4732418C03Rik
Mus musculus	RefSeq	ILMN_214678	ILMN_214678	TDRD3	NM_172605.2	NM_172605.2		219249	31982086	NM_172605.2	Tdrd3	NP_766193.2	ILMN_3154215	006370286	A	1898	CTCCGCCTCTGAAAGGAAGGCGCGTAGGACCGATTAAGTCAGCAGGACCT	14	+	87906196-87906245	14qE1	Mus musculus tudor domain containing 3 (Tdrd3), mRNA.				6720468N18; 4732418C03Rik	6720468N18; 4732418C03Rik
Mus musculus	RefSeq	ILMN_214678	ILMN_214678	TDRD3	NM_172605.2	NM_172605.2		219249	31982086	NM_172605.2	Tdrd3	NP_766193.2	ILMN_3075157	007650440	I	392	AAGCTGCGCCAAGGATGCTCCGCGTGCAGATGACGGATGGGCATACAAGT	14	+	87871956-87871969:87871970-87872005	14qE1	Mus musculus tudor domain containing 3 (Tdrd3), mRNA.				6720468N18; 4732418C03Rik	6720468N18; 4732418C03Rik
Mus musculus	RefSeq	ILMN_215087	ILMN_215087	DLX4	NM_007867.3	NM_007867.3		13394	142348376	NM_007867.3	Dlx4	NP_031893.2	ILMN_1248903	007210605	S	826	ACGTTGTCTTCCCGGACCTCGCCCCCGCCCTGTCGGTAGTGGCTGCTTAC	11	-	95006702-95006751	11qD	Mus musculus distal-less homeobox 4 (Dlx4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Dlx-4; Dlx7; MGC129167	Dlx-4; Dlx7; MGC129167
Mus musculus	RefSeq	ILMN_210904	ILMN_210904	ACSM3	NM_016870.3	NM_016870.3		20216	85810989	NM_016870.3	Acsm3	NP_058566.3	ILMN_1247231	007380544	S	66	GGACTTGGCCAACATCCTAAAGACCAGTGAATCTCTCACTTGAACACAGA	7	+	126909892-126909941	7qF2	Mus musculus acyl-CoA synthetase medium-chain family member 3 (Acsm3), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IDA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of a long-chain carboxylic acid to an acceptor, coupled to the hydrolysis of ATP [goid 15645] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	Sa; Sah	Sa; Sah
Mus musculus	RefSeq	ILMN_218388	ILMN_218388	CAPN6	NM_007603.2	NM_007603.2		12338	34328102	NM_007603.2	Capn6	NP_031629.2	ILMN_2695143	005490121	S	3215	TCACATCTTATCCCAAGTCCCACCTCCAACAATATTTCAGTGCTTCTGCA	X	-	140236951-140237000	XqF2	Mus musculus calpain 6 (Capn6), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214146	ILMN_214146	2700050L05RIK	NM_178115.3	NM_178115.3		214764	54261742	NM_178115.3	2700050L05Rik	NP_835216.2	ILMN_1233948	003140333	S	1678	CAGACTCCCCTTTAAATGAGAATTCGGATGAAAGCTACAGTGAAGAGGAG	7	+	140843686-140843735	7qF3	Mus musculus RIKEN cDNA 2700050L05 gene (2700050L05Rik), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MGC27934; MGC58090; AU022667; AW558805	MGC27934; MGC58090; AU022667; AW558805
Mus musculus	RefSeq	ILMN_216868	ILMN_214146	2700050L05RIK	NM_178115.3	NM_178115.3		214764	54261742	NM_178115.3	2700050L05Rik	NP_835216.2	ILMN_1217838	003460544	S	944	GGCCTCAGCACCTAAAGAGCAAAACCTTACTACTTTGTTCAATGACGGGG	7	+	140838714-140838763	7qF3	Mus musculus RIKEN cDNA 2700050L05 gene (2700050L05Rik), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MGC27934; MGC58090; AU022667; AW558805	MGC27934; MGC58090; AU022667; AW558805
Mus musculus	RefSeq	ILMN_217508	ILMN_217508	REC8	NM_020002.2	NM_020002.2		56739	31982698	NM_020002.2	Rec8	NP_064386.2	ILMN_2684093	002600026	S	1969	AAGCCATATGGGCCCCTCCTGATTCGTCCTGGACCCAAATTCCCCTGAGC	14	+	56244150-56244198:56244199-56244199	14qC3	Mus musculus REC8 homolog (yeast) (Rec8), mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IEA]; The region of a condensed chromosome in the nucleus that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 780] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A cohesin complex that mediates sister chromatid cohesion during meiosis; has a subunit composition distinct from that of the mitotic cohesin complex [goid 30893] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IDA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IMP]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Rec8L1; mrec; Rec8; AW546880	Rec8L1; mrec; Rec8; AW546880
Mus musculus	Riken	ILMN_203366	ILMN_203366	GLB1	ri|9330151I20|PX00105K04|AK034049|1676					AK034049	Glb1		ILMN_2556758	007510121	S	1324	GGCTTTAGGCTCTGCACCCTTCATCTGTGAGGCTGGGATTAGGGTTCCTA						A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A multimeric enzyme complex that in E. coli is a heterooctamer made up of four alpha subunits and four beta subunits. Catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides [goid 9341] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]		
Mus musculus	MEEBO	ILMN_221968	ILMN_221968	6030470M02RIK	scl0320264.1_237	NM_177119.2			31342843	NM_177119.2	6030470M02Rik		ILMN_2742786	005130504	S	2238	CACAGACTATGCCTGTGGAACTTAAAGGATTAAACGGAATGCGCCTGTGG										
Mus musculus	RefSeq	ILMN_209369	ILMN_209369	B230120H23RIK	NM_023057.3	NM_023057.3		65964	146135016	NM_023057.3	B230120H23Rik	NP_075544.1	ILMN_1217939	000610221	S	1156	CAGGCAAGCGGTTGCTGCTTCTGGAAGAGGAAGATCTGAAAGACATGGGC				2qC3	Mus musculus RIKEN cDNA B230120H23 gene (B230120H23Rik), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IDA]	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak
Mus musculus	RefSeq	ILMN_209369	ILMN_209369	B230120H23RIK	NM_023057.3	NM_023057.3		65964	146135016	NM_023057.3	B230120H23Rik	NP_075544.1	ILMN_2595189	002370348	S	1343	GAACCTTGAACTTGTTTTTGGTTTTCACTTGAAGCCAGGAACTGGCCCAC				2qC3	Mus musculus RIKEN cDNA B230120H23 gene (B230120H23Rik), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IDA]	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak
Mus musculus	RefSeq	ILMN_209369	ILMN_209369	B230120H23RIK	NM_023057.3	NM_023057.3		65964	146135016	NM_023057.3	B230120H23Rik	NP_075544.1	ILMN_1256000	000050017	S	1526	GGAGAAGTGGATCGTGGGAATAGCGGAGGATCAGACTGTGGAGTGCACGG				2qC3	Mus musculus RIKEN cDNA B230120H23 gene (B230120H23Rik), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IDA]	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak
Mus musculus	RefSeq	ILMN_209369	ILMN_209369	B230120H23RIK	NM_023057.3	NM_023057.3		65964	146135016	NM_023057.3	B230120H23Rik	NP_075544.1	ILMN_2607468	001170326	S	1613	TAAGCACGTGCACTCCATACAGTGGGACAGAACGAAGCCTCAGGATGAGG				2qC3	Mus musculus RIKEN cDNA B230120H23 gene (B230120H23Rik), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IDA]	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak
Mus musculus	RefSeq	ILMN_209369	ILMN_209369	B230120H23RIK	NM_023057.3	NM_023057.3		65964	146135016	NM_023057.3	B230120H23Rik	NP_075544.1	ILMN_2666792	005890471	S	1418	GGAGATGGATGGGGACGAAGTTGCAATCACGTACATAAAAGATGTGACTT				2qC3	Mus musculus RIKEN cDNA B230120H23 gene (B230120H23Rik), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IDA]	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak
Mus musculus	RefSeq	ILMN_214060	ILMN_214060	PAFAH1B2	NM_008775.3	NM_008775.3		18475	71067117	NM_008775.3	Pafah1b2	NP_032801.2	ILMN_1229969	003140653	S	1094	GACACATTTGTAGAATTATCACTTTTCCCTAGGACAACATCAAGCAAGAG	9	-	45776491-45776540	9qA5.2	Mus musculus platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit (Pafah1b2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]	Pafahb; mus[b]; AU021353; AI747451	Pafahb; mus[b]; AU021353; AI747451
Mus musculus	MEEBO	ILMN_209427	ILMN_209427	PREI3	scl0019070.1_134	NM_025283.2			40254520	NM_025283.2	Prei3		ILMN_2776911	006660392	S	0	TCTGGCACTATGGTCATGGCGGAGGGGACGGCAGTGCTGAGGCGGAACAG										
Mus musculus	MEEBO	ILMN_195958	ILMN_195958	PCK1	scl19833.10_32				7110682	NM_011044	Pck1		ILMN_2777986	007510343	S	2575	ATTGGTATCCGGACCACTTCTTGGGAAAAAAATTACAAAATAAACTTTTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IDA]; The chemical reactions and pathways resulting in the formation of glycerol, 1,2,3-propanetriol, from other compounds, including pyruvate [goid 46327] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IEA]; Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2 [goid 4613] [evidence IEA]; Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 [goid 4611] [evidence IMP]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222296	ILMN_222296	9130401M01RIK	NM_029418.2	NM_029418.2		75758	31542039	NM_029418.2	9130401M01Rik	NP_083694.1	ILMN_2799527	002100435	S	3907	TGCTTTGTTTTGGATAGTGCTTTGCTACAAGGCCTAAGCTGGCCTGGAAC	15	-	57848019-57848068	15qD1	Mus musculus RIKEN cDNA 9130401M01 gene (9130401M01Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI849328	AI849328
Mus musculus	RefSeq	ILMN_222296	ILMN_222296	9130401M01RIK	NM_029418.2	NM_029418.2		75758	31542039	NM_029418.2	9130401M01Rik	NP_083694.1	ILMN_2747580	001110114	S	3848	GTGTATTTGAGGAATAGCTGCTGGAAGTAACCCTTTTGCTGCTGGTGGGG	15	-	57848078-57848127	15qD1	Mus musculus RIKEN cDNA 9130401M01 gene (9130401M01Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI849328	AI849328
Mus musculus	Riken	ILMN_206910	ILMN_206910	9630034F02RIK	ri|9630034F02|PX00116E01|AK079344|2325					AK079344	9630034F02Rik		ILMN_1241092	001260626	S	2099	GTTGAGGGCAAGCATCCCCCACCCCCAGGCCACTGGGATTTATTAAGCAA										
Mus musculus	RefSeq	ILMN_185346	ILMN_230381	NARS2	NM_153591.3	NM_153591.3		244141	141802200	NM_153591.3	Nars2	NP_705819.2	ILMN_1241088	000130092	S	3674	GTTTAGGGACCAATGAGAGGGATAATGGGCTTTCATCGGACTCACTGCAG	7	+	104213186-104213235	7qE1	Mus musculus asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) (Nars2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling asparagine to asparaginyl-tRNA, catalyzed by asparaginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6421] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6422] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp) [goid 4815] [evidence IEA]; Catalysis of the reaction: ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn) [goid 4816] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI875199; MGC41336	AI875199; MGC41336
Mus musculus	RefSeq	ILMN_218190	ILMN_218190	TMEM117	NM_178789.4	NM_178789.4		320709	146198763	NM_178789.4	Tmem117	NP_848904.1	ILMN_2692733	002650129	S	2494	GGACCACCAAGGAATTGAAGTCGTAATCATGTGAAGCCGGCACAGCCCAC				15qE3	Mus musculus transmembrane protein 117 (Tmem117), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			B930062P21Rik	B930062P21Rik
Mus musculus	MEEBO	ILMN_192291	ILMN_192291	IGHV1S21_K02154_IG_HEAVY_VARIABLE_1S21_81	IGHV1S21_K02154_Ig_heavy_variable_1S21_81						IGHV1S21_K02154_Ig_heavy_variable_1S21_81		ILMN_1224296	003850379	S	20	TGGATATATTTATCCTGGAAATGGTTATACTGCGTACAATGAGCAGTTCA										
Mus musculus	RefSeq	ILMN_201201	ILMN_201201	LOC384925	XM_357941.1	XM_357941.1			38089780	XM_357941.1	LOC384925		ILMN_2541448	000780020	S	9	CGAGCTGGGGTTCTTGGTTCTGATGCCAGCCTCCCACAAGAAAGCTCTTG										
Mus musculus	MEEBO	ILMN_186028	ILMN_186028	B930046C15RIK	scl00319328.1_24						B930046C15Rik		ILMN_2431998	005420022	S	20	TTAAAACCCTTTTGAGTGCTGAGATTACTGGCATGTACCAAGCTGTGGCT										
Mus musculus	RefSeq	ILMN_211782	ILMN_211782	ARFIP2	NM_029802.2	NM_029802.2		76932	31981362	NM_029802.2	Arfip2	NP_084078.2	ILMN_2955806	002470181	S	1765	CCACCCAGTTGAACTGTGCTTAGAACCCCAGAAGACTGGGTTCTAGCACT				7qE3	Mus musculus ADP-ribosylation factor interacting protein 2 (Arfip2), mRNA.				POR; Por1; 2310002N04Rik	POR; Por1; 2310002N04Rik
Mus musculus	RefSeq	ILMN_203526	ILMN_248854	CTTNBP2	XM_978818.1	XM_978818.1		30785	94377114	XM_978818.1	Cttnbp2	XP_983912.1	ILMN_1253953	002750328	S	3849	GCCAGCTGCTGCCTCAGTAGGCACTGTGATTCCAAGTCCAGTTGCACACA				6qA2	PREDICTED: Mus musculus cortactin binding protein 2, transcript variant 14 (Cttnbp2), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISO]	Interacting selectively with any protein involved in modulating the reorganization of the cytoskeleton [goid 5519] [evidence ISO]		
Mus musculus	RefSeq	ILMN_220306	ILMN_220306	SHKBP1	NM_138676.2	NM_138676.2		192192	109659850	NM_138676.2	Shkbp1	NP_619617.2	ILMN_2734334	004200474	S	1468	TCCGCTGGCATCCTTCAAGATCCTGGCGCTGGAATCTGTTGATGGGCTCG	7	-	28130218-28130267	7qA3	Mus musculus Sh3kbp1 binding protein 1 (Shkbp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sb1; B930062H15Rik	Sb1; B930062H15Rik
Mus musculus	RefSeq	ILMN_220306	ILMN_220306	SHKBP1	NM_138676.2	NM_138676.2		192192	109659850	NM_138676.2	Shkbp1	NP_619617.2	ILMN_1235687	001440592	S	2099	CGACCCTCCACCAGTCTTGGGAATCCCCTGACAGCTCTCAAGAAAACTCT	7	-	28127350-28127399	7qA3	Mus musculus Sh3kbp1 binding protein 1 (Shkbp1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sb1; B930062H15Rik	Sb1; B930062H15Rik
Mus musculus	Riken	ILMN_204639	ILMN_204639	E130207H16RIK	ri|E130207H16|PX00092J14|AK053693|2389					AK053693	E130207H16Rik		ILMN_1237804	005910091	S	2165	GTTCCAGCAGTGGAGCGGGGAGAAGCAGACATCCACGTGCAAGAGAAGGA										
Mus musculus	RefSeq	ILMN_225966	ILMN_225966	MDK	NM_001012336.1	NM_001012336.1		17242	59894787	NM_001012336.1	Mdk	NP_001012336.1	ILMN_3079236	007000278	I	4	TGACCGGCTCAGACCGGTTCTGGAGACAAAAGGGGCCTTAGCGGCCTTAG	2	-	91771897-91771946	2qE1	Mus musculus midkine (Mdk), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	MK; Mek	MK; Mek
Mus musculus	RefSeq	ILMN_225966	ILMN_225966	MDK	NM_001012336.1	NM_001012336.1		17242	59894787	NM_001012336.1	Mdk	NP_001012336.1	ILMN_3158499	002470465	A	628	AGCTCTGTCAATCACGCCTGTCCTCTCACGCCCACACCAAGTGCCCAAAG	2	-	91770093-91770142	2qE1	Mus musculus midkine (Mdk), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	MK; Mek	MK; Mek
Mus musculus	RefSeq	ILMN_207453	ILMN_207453	2610208M17RIK	NM_145626.1	NM_145626.1		108909	21704129	NM_145626.1	2610208M17Rik	NP_663601.1	ILMN_3104094	001570669	A	1532	CCCTGAGTGTTCCCCGGATGACCAGACTGATTTCCTGAAGAGAGCACGTG	8	+	4089501-4089550		Mus musculus RIKEN cDNA 2610208M17 gene (2610208M17Rik), mRNA.				MGC6869; MGC101949; BC004835	MGC6869; MGC101949; BC004835
Mus musculus	RefSeq	ILMN_242079	ILMN_242079	EG546325	NM_001081670.1	NM_001081670.1		546325	126157512	NM_001081670.1	EG546325	NP_001075139.1	ILMN_2902947	001980040	S	955	GACTGCACCTACACCTGCGCCTGCGTCTGCACCTGCACATGCACCTGTGC	X	+	72086792-72086841	XqA7.3	Mus musculus predicted gene, EG546325 (EG546325), mRNA.					
Mus musculus	Riken	ILMN_206509	ILMN_206509	D830013F15RIK	ri|D830013F15|PX00198D19|AK085811|2093					AK085811	D830013F15Rik		ILMN_1248042	003440594	S	1576	CCAGAGCTAAAGGAGGTAGGGGGCTTTCCCATGGTCTTAGTGTGTCCTCC										
Mus musculus	RefSeq	ILMN_217364	ILMN_217364	PCDHA5	NM_009959.1	NM_009959.1		12941	20137001	NM_009959.1	Pcdha5	NP_034089.1	ILMN_2682345	004290767	S	2011	CAGACCCCGAAGGTCTCATCCAGGGTGTTGGTTGGAACCTCTGGTTCAGA	18	+	37122104-37122153	18qB2-qB3	Mus musculus protocadherin alpha 5 (Pcdha5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Cnr6; Crnr6	Cnr6; Crnr6
Mus musculus	RefSeq	ILMN_198327	ILMN_198327	LOC240312	XM_140362.3	XM_140362.3			38083893	XM_140362.3	LOC240312		ILMN_2531292	004180750	S	1939	GACCTTCCAAAGAACAGTCACATCCCTTGCCATTATGACCTGCTGCCACC										
Mus musculus	RefSeq	ILMN_228582	ILMN_228582	MFGE8	NM_001045489.1	NM_001045489.1		17304	113865976	NM_001045489.1	Mfge8	NP_001038954.1	ILMN_3133448	006510465	A	1918	TGGCTCTGGGTGGTTGACAGGTTGGCTGTGGGACCTCTGCTGGCTTGCTA	7	-	86278701-86278750	7qD3	Mus musculus milk fat globule-EGF factor 8 protein (Mfge8), transcript variant 2, mRNA.	Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence IDA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]; Interacting selectively with phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine [goid 8429] [evidence IDA]; Interacting selectively with phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 1786] [evidence IDA]	AA408458; P47; SED1; Mfgm; MFG-E8; AI325141; lactadherin	AA408458; P47; SED1; Mfgm; MFG-E8; AI325141; lactadherin
Mus musculus	RefSeq	ILMN_185588	ILMN_239393	BIN1	NM_009668.2	NM_009668.2		30948	134053916	NM_009668.2	Bin1	NP_033798.1	ILMN_2701365	006520121	S	734	GCCCCCCAGTGGTGCCAAGGCAAACTACAGGCTCATCTTGTAGCTCAAAC	18	+	32574623-32574672	18qB1	Mus musculus bridging integrator 1 (Bin1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	BRAMP-2; Amphl; SH3P9; ALP-1	BRAMP-2; Amphl; SH3P9; ALP-1
Mus musculus	RefSeq	ILMN_194178	ILMN_314108	LOC100040740	XM_001475419.1	XM_001475419.1		100040740	149264840	XM_001475419.1	LOC100040740	XP_001475469.1	ILMN_2504109	000270601	S	1548	GTGCTGGACCAATAGTTACTGAGTTCTTAAATATTTTATCAGCCTTCCTC	14	+	3305685-3305734	14qA1	PREDICTED: Mus musculus similar to diacylglycerol kinase, eta (LOC100040740), mRNA.					
Mus musculus	Riken	ILMN_203859	ILMN_203859	A630004K05RIK	ri|A630004K05|PX00144G23|AK041350|882					AK041350	A630004K05Rik		ILMN_1234973	002600156	S	774	ATGGTGTACATCGCTGTGACCCTTGCTTGCACTTGGGTGATTGGTGCAGG										
Mus musculus	RefSeq	ILMN_228169	ILMN_228169	DZIP1	NM_025943.2	NM_025943.2		66573	57242787	NM_025943.2	Dzip1	NP_080219.2	ILMN_3034659	005260598	I	1573	CTCCTTTAACCCGACAAACACTGGAACCTAAATCGGCTGCACCAACCACA	14	-	119299211-119299260	14qE4	Mus musculus DAZ interacting protein 1 (Dzip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2810422M04Rik; 2510025K24Rik; mKIAA0996	2810422M04Rik; 2510025K24Rik; mKIAA0996
Mus musculus	MEEBO	ILMN_191890	ILMN_191890	1810008K04RIK	scl17885.1.1463_4						1810008K04Rik		ILMN_2483117	001260138	S	12	TCCAGCATGTTCGCCCTAGGTGCACAGCACCCCTACACAAAGGCTACAGA										
Mus musculus	RefSeq	ILMN_198599	ILMN_198599	LOC278061	XM_205167.3	XM_205167.3			38086373	XM_205167.3	LOC278061		ILMN_1213342	005820102	S	2112	GCTTTCTGGGGTAGGAAGTTGTGTGTTGGGCCCAAGTATGCTTCCACCGC										
Mus musculus	RefSeq	ILMN_260822	ILMN_260822	WDR72	NM_001033500.1	NM_001033500.1		546144	85702040	NM_001033500.1	Wdr72	NP_001028672.1	ILMN_3160587	004210711	S	699	CAACACAAGGTGGCTGCGGCACTTCTGCTCTCTGGCCACTAGATGTCAGC	9	+	73939150-73939199	9qD	Mus musculus WD repeat domain 72 (Wdr72), mRNA.				D230040E23	D230040E23
Mus musculus	RefSeq	ILMN_260294	ILMN_260294	OLFR1408	NM_146764.1	NM_146764.1		258759	22129318	NM_146764.1	Olfr1408	NP_666975.1	ILMN_2812700	006420161	S	716	CCTGCAGCTCCCACCTGACTGTAGTAGTGATTCACTATGGCTGTGCCTCC	1	-	175060581-175060630	1qH3	Mus musculus olfactory receptor 1408 (Olfr1408), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-4	MOR267-4
Mus musculus	RefSeq	ILMN_198654	ILMN_198654	LOC233227	XM_145602.3	XM_145602.3			38086686	XM_145602.3	LOC233227		ILMN_1216411	006370524	S	308	CAGCAGTAGACGCCCATTCAACATCACAAATTAGACACCAAGCAGGGAGG										
Mus musculus	RefSeq	ILMN_214695	ILMN_227278	CST11	NM_030059.2	NM_030059.2		78240	141802553	NM_030059.2	Cst11	NP_084335.1	ILMN_1235959	002480136	S	454	CGCCATTCCCTGGGTTGAAGTATTCAAAATACTCAAGAAAAACTGTACCG	2	-	148594456-148594505	2qG3	Mus musculus cystatin 11 (Cst11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	BB067629; CRES2; 9230101F08Rik; mCST E1	BB067629; CRES2; 9230101F08Rik; mCST E1
Mus musculus	RefSeq	ILMN_214695	ILMN_227278	CST11	NM_030059.2	NM_030059.2		78240	141802553	NM_030059.2	Cst11	NP_084335.1	ILMN_2650856	004390468	S	367	GACCACCTGCTTGAAGACAGAGACGAGCCTCTGTGATATCCAGAAAGGGG	2	-	148596129-148596178	2qG3	Mus musculus cystatin 11 (Cst11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	BB067629; CRES2; 9230101F08Rik; mCST E1	BB067629; CRES2; 9230101F08Rik; mCST E1
Mus musculus	MEEBO	ILMN_191266	ILMN_191266	PRKAR2A	scl36457.11_110				22550093	NM_008924	Prkar2a		ILMN_2477624	006220333	S	10	AACAATTCTTGATCTGTAGCCTTGAACATATAATTAAAAGTCACTAGAAG						An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191266	ILMN_191266	PRKAR2A	scl36457.11_110				22550093	NM_008924	Prkar2a		ILMN_2760353	001090035	S	3950	AATCAGCATTGAGCTTTTCTTTGAGCAGTTTAGTAAGCAAATTCAGCAGC						An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213034	ILMN_213034	PSMB11	NM_175204.3	NM_175204.3		73902	141803161	NM_175204.3	Psmb11	NP_780413.1	ILMN_2632853	004040059	S	2916	ATAGGCATCTGCACTTCAGTGTGGTGGGCGAGGCATGTGGTGTTGTTCTG	14	+	55247065-55247114	14qC3	Mus musculus proteasome (prosome, macropain) subunit, beta type, 11 (Psmb11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]	beta5t; psmb11	beta5t; psmb11
Mus musculus	RefSeq	ILMN_189752	ILMN_189752	TUBD1	NM_019756.2	NM_019756.2		56427	83921619	NM_019756.2	Tubd1	NP_062730.1	ILMN_2506229	000270400	S	1615	CAGTTATGGTAGTCTTGGACCCTAAGCCAAGAGGAAAAGCTCTTTACAGG	11	+	86380623-86380647:86380648-86380672	11qC	Mus musculus tubulin, delta 1 (Tubd1), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Tubd; 4930550G19Rik	Tubd; 4930550G19Rik
Mus musculus	RefSeq	ILMN_189752	ILMN_189752	TUBD1	NM_019756.2	NM_019756.2		56427	83921619	NM_019756.2	Tubd1	NP_062730.1	ILMN_2464061	004150754	S	1091	GTCCGTAACATTCCTCAGATGTCTGCGGCGTCTCTGGCGTACAGCGCGTT	11	+	86371277-86371326	11qC	Mus musculus tubulin, delta 1 (Tubd1), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Tubd; 4930550G19Rik	Tubd; 4930550G19Rik
Mus musculus	RefSeq	ILMN_210322	ILMN_210322	GLCCI1	NM_178072.2	NM_178072.2		170772	31342586	NM_178072.2	Glcci1	NP_835173.1	ILMN_2734737	000070639	S	1320	TCCTACAGTGAGGACCGGAGGGCTGCTAGAAACACATAAGCCAGGACCGC	6	+	8542151-8542200	6qA1	Mus musculus glucocorticoid induced transcript 1 (Glcci1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Tssn1; Gig18; 2310047L21Rik; A130036A18Rik	Tssn1; Gig18; 2310047L21Rik; A130036A18Rik
Mus musculus	Riken	ILMN_206121	ILMN_206121	STRA6	ri|C630015F10|PX00084A22|AK083120|2004					AK083120	Stra6		ILMN_1215912	001780487	S	1831	CCCCACCTGTCAACGCAGGTGATGACTCTGATCTCTCCAGGAAGGTGAAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_203664	ILMN_256394	EG434228	XM_989165.1	XM_989165.1		434228	94381203	XM_989165.1	EG434228	XP_994259.1	ILMN_1243120	000670747	S	521	CTGCCCAGCCTTCAACACAGGCTCAAGGACAATCAGGGGCAAAGCTGTCA				7qF1	PREDICTED: Mus musculus predicted gene, EG434228 (EG434228), mRNA.					
Mus musculus	RefSeq	ILMN_197199	ILMN_197199	LOC381351	XM_355316.1	XM_355316.1			38074559	XM_355316.1	LOC381351		ILMN_1249937	003710538	S	188	GGCTTCTCGTATCTTCGGCTCCCACAGAGCTGATTTATCCAGAGCCCAGC										
Mus musculus	RefSeq	ILMN_248671	ILMN_248671	9830163H01RIK	NM_001001500.1	NM_001001500.1		414109	47894414	NM_001001500.1	9830163H01Rik	NP_001001500.1	ILMN_3160411	000070041	S	2870	GATTTCCCCTCCCAAAGTACCCAGGACTACAGATGCATACCACTGTGCCT	9	+	51885510-51885559	9qA5.3	Mus musculus RIKEN cDNA 9830163H01 gene (9830163H01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196360	ILMN_196360	GSDMC3	NM_183194.2	NM_183194.2		270328	141802663	NM_183194.2	Gsdmc3	NP_899017.1	ILMN_1246145	005870520	S	1735	TTGTACCTACCCCCATTGTTTCTTTTAATCCACCACTTCCAAGTCCCCCT	15	-	63689637-63689686	15qD1	Mus musculus gasdermin C3 (Gsdmc3), mRNA.				Gsdmc3	Gsdmc3
Mus musculus	RefSeq	ILMN_196360	ILMN_196360	GSDMC3	NM_183194.2	NM_183194.2		270328	141802663	NM_183194.2	Gsdmc3	NP_899017.1	ILMN_2672969	004210475	S	1292	GGCTCCTCACGCACCAAGTAGAGCTGGTAACGAGCATCCTACAGCCAAAC	15	-	63690080-63690104:63690648-63690672	15qD1	Mus musculus gasdermin C3 (Gsdmc3), mRNA.				Gsdmc3	Gsdmc3
Mus musculus	RefSeq	ILMN_198145	ILMN_261298	LOC666935	XM_987108.1	XM_987108.1		666935	94401859	XM_987108.1	LOC666935	XP_992202.1	ILMN_2530644	001230184	S	249	AGGGCTTCTTCCAGGACTGTGGAGCCAAGGAAAGGGGCTTTGTTACCCGG	17	+	28848282-28848331		PREDICTED: Mus musculus hypothetical protein LOC666935 (LOC666935), mRNA.					
Mus musculus	MEEBO	ILMN_218225	ILMN_218225	4933428G09RIK	scl0004196.1_6	NM_025755.2			31981186	NM_025755.2	4933428G09Rik		ILMN_2693151	006520543	S	511	ATACTTTTGTGTCAAAGGAAGGCTTTAGGGAGTTGCTTCTGGTCAAGGGT										
Mus musculus	RefSeq	ILMN_219351	ILMN_219351	LCE1D	NM_027137.2	NM_027137.2		69611	141802815	NM_027137.2	Lce1d	NP_081413.1	ILMN_1239166	005720450	S	571	CCTGCCCCTTGAGATGCTGAAATCTTCAGGGAAAGTTTCTGCATTCTACT	3	-	92489478-92489527	3qF1	Mus musculus late cornified envelope 1D (Lce1d), mRNA.				Sprrl7; AI415320; 2310037L11Rik	Sprrl7; AI415320; 2310037L11Rik
Mus musculus	MEEBO	ILMN_210203	ILMN_210203	NOL6	scl0002699.1_4	NM_139237.1			21218429	NM_139237.1	Nol6		ILMN_2728623	005570474	S	2980	GTGAGCCTGGCGGCTGAAGCCCTCCCTATCCTAGAGAAGCAGCTGATGGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_192772	ILMN_192772	A130010C12RIK	scl33270.1.1_296						A130010C12Rik		ILMN_2491182	000940274	S	12	GCCTGCCGTTGGTTGCTTGGCTAAATTTGATCACCTGCTAGACGTGTTTG										
Mus musculus	Riken	ILMN_204714	ILMN_204714	TRAF6	ri|A530087L19|PX00142H22|AK041172|1950					AK041172	Traf6		ILMN_1246274	005090575	S	1878	CCACTGAGGAGGTCAGAGCCTTCGTGTAGTGCCAATCACATCTCTAACCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence TAS]		
Mus musculus	RefSeq	ILMN_220175	ILMN_220175	FCNA	NM_007995.3	NM_007995.3		14133	146134471	NM_007995.3	Fcna	NP_032021.1	ILMN_2718589	007200341	S	1025	TCAACGGGCGCTACTTGTCTGGCTCCCATGAGAGTTATGCGGATGGCATC				2qA3	Mus musculus ficolin A (Fcna), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	Fcn1	Fcn1
Mus musculus	Riken	ILMN_207411	ILMN_207411	F630001K14RIK	ri|F630001K14|PL00014J09|AK089165|3004					AK089165	F630001K14Rik		ILMN_1234229	003190086	S	2840	GCCCTGGAACCTAACTTAAGACCTGAACCCCCATCTTCTCATTGAACCCC										
Mus musculus	RefSeq	ILMN_201518	ILMN_201518	SPEER4B	NM_028561.1	NM_028561.1		73526	21735468	NM_028561.1	Speer4b	NP_082837.1	ILMN_2542607	005860706	S	1623	GCCATGTGCCTCAGTTTACTTGCAATAGACCATCAGTGATTGAGGAGAGC	5	-	27822703-27822752	5qB1	Mus musculus spermatogenesis associated glutamate (E)-rich protein 4b (Speer4b), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SPEER-4B; 1700081O22Rik	SPEER-4B; 1700081O22Rik
Mus musculus	RefSeq	ILMN_245396	ILMN_245396	ABCA13	NM_178259.3	NM_178259.3		268379	116292743	NM_178259.3	Abca13	NP_839990.2	ILMN_2931277	005900068	S	11829	GCATCAGCACAAGCCAGCTGGAGTTCTCTCTGGAGGCATGAAGAGGAAGC	11	+	9351369-9351418	11qA1	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 13 (Abca13), mRNA. XM_922048 XM_922070	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	9830132L24; A930002G16Rik; AI956815	9830132L24; A930002G16Rik; AI956815
Mus musculus	RefSeq	ILMN_198028	ILMN_198028	LOC279922	XM_207057.2	XM_207057.2			38080516	XM_207057.2	LOC279922		ILMN_2530227	003800370	S	1459	TCCAGAAGATGTTCAAACTACTCCTCCACTAGGGTCCCTGTGTTCCAACC										
Mus musculus	RefSeq	ILMN_196740	ILMN_196740	LOC330599	NM_177896.2	NM_177896.2			31342727	NM_177896.2	LOC330599		ILMN_2525622	002630019	S	3414	AGAAGAGGGGAGCACCAGGCTCAGAGAGCGACCCTGCCTCAGGAAACAGA										
Mus musculus	RefSeq	ILMN_196740	ILMN_196740	LOC330599	NM_177896.2	NM_177896.2			31342727	NM_177896.2	LOC330599		ILMN_2525621	003390114	S	3756	GTTACTGGACATTAGAAGCCAGCTGAGGCTGGAGATGGGGCTCAGTGGAG										
Mus musculus	RefSeq	ILMN_196740	ILMN_196740	LOC330599	NM_177896.2	NM_177896.2			31342727	NM_177896.2	LOC330599		ILMN_2630104	003840484	S	2755	AGCGGCTCTTAGTGCCTGGTTTCTTTAGGTGAGACGACATGGGAGCCATG										
Mus musculus	RefSeq	ILMN_236117	ILMN_236117	CYPT10	NM_001039944.1	NM_001039944.1		664726	90186259	NM_001039944.1	Cypt10	NP_001035033.1	ILMN_2908280	003360463	S	5	AGAGCTCTGCTATGGCTCAGGTGGCCAAGAAAGTCCACGGGTCTAGAGCG					Mus musculus cysteine-rich perinuclear theca 10 (Cypt10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]				
Mus musculus	RefSeq	ILMN_220468	ILMN_240378	9230104L09RIK	NM_029960.2	NM_029960.2		77705	142358158	NM_029960.2	9230104L09Rik	NP_084236.1	ILMN_2722414	006380709	S	581	CATGTCCTGGAATTTTAGAAATGCCCCTTTGTACAGATTCATCACATAGA	2	-	148672477-148672526	2qG3	Mus musculus RIKEN cDNA 9230104L09 gene (9230104L09Rik), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC129251; RP23-250M11.8; MGC129250; mCST E2	MGC129251; RP23-250M11.8; MGC129250; mCST E2
Mus musculus	RefSeq	ILMN_221530	ILMN_221530	SLBP	NM_009193.1	NM_009193.1		20492	6677986	NM_009193.1	Slbp	NP_033219.1	ILMN_2736826	000450392	S	1358	TATGTAAGTTATATAGTTTTAATTTGGAACTTGAAATAGCATTAGTGTGA	5	-	33982934-33982983	5qB2	Mus musculus stem-loop binding protein (Slbp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in forming the mature 3' end of a histone mRNA molecule [goid 6398] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]		
Mus musculus	RefSeq	ILMN_223723	ILMN_223723	RGL3	NM_023622.2	NM_023622.2		71746	31982626	NM_023622.2	Rgl3	NP_076111.2	ILMN_2991779	007160092	S	2259	GTAGGGGCCTATTTTCTGGGAGAGCCTCCACCCCCACTCATGGAAGCTAT	9	-	21722170-21722219	9qA3	Mus musculus ral guanine nucleotide dissociation stimulator-like 3 (Rgl3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence TAS]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ral family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 8321] [evidence IDA]	mFLJ00153; 1300003D20Rik	mFLJ00153; 1300003D20Rik
Mus musculus	RefSeq	ILMN_196917	ILMN_196917	LOC381269	XM_355212.1	XM_355212.1			38049566	XM_355212.1	LOC381269		ILMN_2526249	004250402	S	792	CCATTTCCAAGCCCCTGAAGGGAGGCCCAGAAGAGCGGAGTTCTTTTACC										
Mus musculus	Riken	ILMN_205344	ILMN_205344	A730057L01RIK	ri|A730057L01|PX00151F15|AK043121|3202					AK043121	A730057L01Rik		ILMN_1242936	005310373	S	2892	CCTCTCGGACGAAATGAGTAAGCCATGCTAGAGAGTCGGCAAGTGGCTGC										
Mus musculus	RefSeq	ILMN_223463	ILMN_223463	ATP1A3	NM_144921.1	NM_144921.1		232975	21450320	NM_144921.1	Atp1a3	NP_659170.1	ILMN_3162695	006350689	I	3329	CCTTGAGCTCATGTCCCTGAGTTTCTCAGTGCTGGGATGACAGGCCTGCC	7	-	25763702-25763751	7qA3	Mus musculus ATPase, Na+/K+ transporting, alpha 3 polypeptide (Atp1a3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IMP]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor, followed by the movement of ions through a channel in the receptor complex [goid 35235] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a inorganic cations with a valency of one from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage [goid 15077] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC38914; MGC38713; Atpa-2; MGC27631; MGC39036	MGC38914; MGC38713; Atpa-2; MGC27631; MGC39036
Mus musculus	RefSeq	ILMN_212430	ILMN_212430	NSG1	NM_010942.3	NM_010942.3		18196	77736540	NM_010942.3	Nsg1	NP_035072.2	ILMN_2626345	003290564	S	1959	CGCAAAGAGCAATACACATGTGCCAAAACTTGTCTGTAGAGGGATCCGAC	5	-	38528563-38528612	5qB3	Mus musculus neuron specific gene family member 1 (Nsg1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IEA]	Interacting selectively with a dopamine receptor [goid 50780] [evidence IEA]	Neep21; m234; p21	Neep21; m234; p21
Mus musculus	RefSeq	ILMN_194367	ILMN_194367	TNFSF11	NM_011613.3	NM_011613.3		21943	114842414	NM_011613.3	Tnfsf11	NP_035743.2	ILMN_2505780	002480255	S	1754	CCTGAAGGTACTCGTAGCTAAGGGGGCAGAATACTGTTTCTGGTGACCAC	14	-	78677684-78677733	14qD3	Mus musculus tumor necrosis factor (ligand) superfamily, member 11 (Tnfsf11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IGI]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IDA]; Any process that modulates the frequency, rate or extent of osteoclast differentiation [goid 45670] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IGI]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence TAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	RANKL; Ly109l; ODF; OPGL; Trance; OPG	RANKL; Ly109l; ODF; OPGL; Trance; OPG
Mus musculus	Riken	ILMN_206900	ILMN_206900	F730049H03RIK	ri|F730049H03|PL00003N16|AK089540|1039					AK089540	F730049H03Rik		ILMN_2583539	004180685	S	452	TGGGTGAAAGGTTATGCAAGAGGAGGAAAAGCCCGAGGGTCCCAGCCCCA										
Mus musculus	RefSeq	ILMN_192511	ILMN_192511	XPO7	NM_023045.2	NM_023045.2		65246	119508429	NM_023045.2	Xpo7	NP_075532.1	ILMN_1251572	006130370	S	2967	AAGGACAACACCCCTGAACCGGGAGAGTGACTGCTTTCTGCATATCATGC	14	-	71069149-71069198	14qD2	Mus musculus exportin 7 (Xpo7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [evidence TAS]	mKIAA0745; BB164534; Ranbp16; 4930506C02Rik	mKIAA0745; BB164534; Ranbp16; 4930506C02Rik
Mus musculus	RefSeq	ILMN_192511	ILMN_192511	XPO7	NM_023045.2	NM_023045.2		65246	119508429	NM_023045.2	Xpo7	NP_075532.1	ILMN_1224755	003170022	S	4189	AAAGTCGGATTTATGTTTTAGGATTCTTGGTCTCTATAGGGAGACGACAG	14	-	71064932-71064981	14qD2	Mus musculus exportin 7 (Xpo7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [evidence TAS]	mKIAA0745; BB164534; Ranbp16; 4930506C02Rik	mKIAA0745; BB164534; Ranbp16; 4930506C02Rik
Mus musculus	RefSeq	ILMN_211538	ILMN_192511	XPO7	NM_023045.2	NM_023045.2		65246	119508429	NM_023045.2	Xpo7	NP_075532.1	ILMN_1240092	004590056	S	8841	CCAGATGTTTGTGGCTGGCATAATTTGTGGCTTAGGAGTGCTCAGGTTGC	14	-	71060280-71060329	14qD2	Mus musculus exportin 7 (Xpo7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [evidence TAS]	mKIAA0745; BB164534; Ranbp16; 4930506C02Rik	mKIAA0745; BB164534; Ranbp16; 4930506C02Rik
Mus musculus	RefSeq	ILMN_213425	ILMN_213425	CPSF2	NM_016856.2	NM_016856.2		51786	31542417	NM_016856.2	Cpsf2	NP_058552.1	ILMN_2636951	000460438	S	4697	CCCCAGGTCTAGAGGTTGGGGGGTTACTTAGTGTATCTGTTGCTGTATGG	12	+	103243610-103243659	12qE	Mus musculus cleavage and polyadenylation specific factor 2 (Cpsf2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	2610024B04Rik; AI662483; MCPSF; Cpsf; 100kDa; mKIAA1367	2610024B04Rik; AI662483; MCPSF; Cpsf; 100kDa; mKIAA1367
Mus musculus	RefSeq	ILMN_199787	ILMN_234911	SPATA5	XM_622894.3	XM_622894.3		57815	94369521	XM_622894.3	Spata5	XP_622894.3	ILMN_1223495	004560544	S	481	CAGGCTCAGGAAATGGACTTGGCGCTGAGGTTTGTCCCTTTTCTTTGGTG				3qB	PREDICTED: Mus musculus spermatogenesis associated 5, transcript variant 4 (Spata5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_249302	ILMN_249302	EZH1	NM_007970.1	NM_007970.1		14055	6679718	NM_007970.1	Ezh1	NP_031996.1	ILMN_3107974	004390372	A	979	CGGGAGCAGTCTCTGCACTCTTTCCACACCCTTTTCTGCCGGCGCTGTTT	11	-	101069458-101069507	11qD	Mus musculus enhancer of zeste homolog 1 (Drosophila) (Ezh1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	mKIAA0388; AW557915	mKIAA0388; AW557915
Mus musculus	RefSeq	ILMN_219824	ILMN_259733	EG328644	NM_198629.1	NM_198629.1		328644	38348499	NM_198629.1	EG328644	NP_941031.1	ILMN_1220774	003390348	S	2435	GTGCTCTGAGCTCTCTATAGGATAATGGAAGAGGAGAGAGCTACGGTCCC	16	+	20605367-20605416	16qB1	Mus musculus predicted gene, EG328644 (EG328644), mRNA.				MGC130431	MGC130431
Mus musculus	RefSeq	ILMN_211000	ILMN_211000	IFT172	NM_026298.4	NM_026298.4		67661	46358418	NM_026298.4	Ift172	NP_080574.4	ILMN_2623451	000270278	S	4931	GGACCCTGGATGCCCTGGACCATTCAGATTTTCAGGATACTGACATTCCC	5	-	31556627-31556676	5qB1	Mus musculus intraflagellar transport 172 homolog (Chlamydomonas) (Ift172), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	wim; Slb; 4930553F24Rik	wim; Slb; 4930553F24Rik
Mus musculus	RefSeq	ILMN_211000	ILMN_211000	IFT172	NM_026298.4	NM_026298.4		67661	46358418	NM_026298.4	Ift172	NP_080574.4	ILMN_2829646	000620121	S	4963	CAGGATACTGACATTCCCTTTGAGGTGCCGCTCCCAGCCAAGCAGCACGT	5	-	31556595-31556644	5qB1	Mus musculus intraflagellar transport 172 homolog (Chlamydomonas) (Ift172), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	wim; Slb; 4930553F24Rik	wim; Slb; 4930553F24Rik
Mus musculus	RefSeq	ILMN_211000	ILMN_211000	IFT172	NM_026298.4	NM_026298.4		67661	46358418	NM_026298.4	Ift172	NP_080574.4	ILMN_2611450	003400367	S	5355	GGCGCAGCCGAGACGCTTACATCTGTCCCTCATTAAAGTTCTCTGAGTAG	5	-	31555655-31555704	5qB1	Mus musculus intraflagellar transport 172 homolog (Chlamydomonas) (Ift172), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	wim; Slb; 4930553F24Rik	wim; Slb; 4930553F24Rik
Mus musculus	Riken	ILMN_202761	ILMN_202761	4930578M22RIK	ri|4930578M22|PX00036I14|AK019816|3461					AK019816	4930578M22Rik		ILMN_2552085	003850184	S	3140	CACTGCCAATGGCCACTTTATTTGCAGCAGACTGTGGACCAAGCAGAGCC										
Mus musculus	RefSeq	ILMN_223350	ILMN_223350	MYOD1	NM_010866.1	NM_010866.1		17927	6996931	NM_010866.1	Myod1	NP_034996.1	ILMN_1233507	006620050	S	1117	CAAACCCCAATGCGATTTATCAGGTGCTTTGAGAGATCGACTGCAGCAGC	7	+	53633733-53633764:53633765-53633782	7qB4	Mus musculus myogenic differentiation 1 (Myod1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IGI]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs [goid 381] [evidence IDA]; Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs [goid 381] [evidence IMP]; Any process that activates or increase the rate of skeletal muscle regeneration [goid 43415] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into a myoblast cell regardless of its environment; upon determination, the cell fate cannot be reversed. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7518] [evidence IDA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence TAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IDA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	MyoD; AI503393; Myod-1; MYF3	MyoD; AI503393; Myod-1; MYF3
Mus musculus	RefSeq	ILMN_214772	ILMN_214772	GPR87	NM_032399.1	NM_032399.1		84111	14161701	NM_032399.1	Gpr87	NP_115775.1	ILMN_2802874	004060646	S	887	GCAAAGAAATGACACTTTTCTTGTCTGCGTGCAACGTGTGCCTGGATCCG	3	-	58983071-58983120	3qD	Mus musculus G protein-coupled receptor 87 (Gpr87), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214772	ILMN_214772	GPR87	NM_032399.1	NM_032399.1		84111	14161701	NM_032399.1	Gpr87	NP_115775.1	ILMN_2651734	000130408	S	429	GGTGGTAAAGCCCTTTGGTGACTCTCGCATGTACAGCATAACCTTCACCA	3	-	58983529-58983578	3qD	Mus musculus G protein-coupled receptor 87 (Gpr87), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]		
Mus musculus	RefSeq	ILMN_231069	ILMN_231069	H2-TW3	NM_001030310.1	NM_001030310.1		547339	71892443	NM_001030310.1	H2-Tw3	NP_001025481.1	ILMN_2793638	001500132	S	656	CTTCCAACTCTTCTCCTCGGATCCTCCAAAAACACACGTGACCCATCACC	17|NT_039664.1	+	39868-39917		Mus musculus similar to histocompatibility 2, T region locus 3 (H2-Tw3), mRNA.					
Mus musculus	RefSeq	ILMN_189157	ILMN_256718	CCNT2	NM_028399.1	NM_028399.1		72949	56550068	NM_028399.1	Ccnt2	NP_082675.1	ILMN_2746718	001440692	S	2682	TTTGTATGTTTAGATATTACCATAAATACTCAGGATTGGAGCTGCTTGTA	1	+	129700582-129700631	1qE3	Mus musculus cyclin T2 (Ccnt2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]	2900041I18Rik; C81304	2900041I18Rik; C81304
Mus musculus	RefSeq	ILMN_209717	ILMN_209717	RDH20	NM_027301.3	NM_027301.3		70061	40789299	NM_027301.3	Rdh20	NP_081577.1	ILMN_1215541	006220307	S	1392	CCCTCCCCACAGCTCTCAAAGCAGGCACTGGTTTGTGTATATATGGAATA	10	+	127347358-127347407	10qD3	Mus musculus retinol dehydrogenase 20 (Rdh20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Rdhs; 1810054F20Rik; SDR-O	Rdhs; 1810054F20Rik; SDR-O
Mus musculus	RefSeq	ILMN_209717	ILMN_209717	RDH20	NM_027301.3	NM_027301.3		70061	40789299	NM_027301.3	Rdh20	NP_081577.1	ILMN_2887537	003890753	S	2651	GCTCAGGCTGGCCTTGAACTTGCTATAACTTTCAATATTCCCTCAAACTC	10	+	127348617-127348666	10qD3	Mus musculus retinol dehydrogenase 20 (Rdh20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Rdhs; 1810054F20Rik; SDR-O	Rdhs; 1810054F20Rik; SDR-O
Mus musculus	RefSeq	ILMN_209717	ILMN_209717	RDH20	NM_027301.3	NM_027301.3		70061	40789299	NM_027301.3	Rdh20	NP_081577.1	ILMN_2598510	006650053	S	2483	TTAAAAATAGCTACCAACTTCTGAGTTATATGAACTATTAATGAAAAAGG	10	+	127348449-127348498	10qD3	Mus musculus retinol dehydrogenase 20 (Rdh20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Rdhs; 1810054F20Rik; SDR-O	Rdhs; 1810054F20Rik; SDR-O
Mus musculus	RefSeq	ILMN_209717	ILMN_209717	RDH20	NM_027301.3	NM_027301.3		70061	40789299	NM_027301.3	Rdh20	NP_081577.1	ILMN_2647240	006840020	S	1763	CCCTGGATCTCAATAGTCCTAGACTCGGATGTTTACTGGGATCACTCAGT	10	+	127347729-127347778	10qD3	Mus musculus retinol dehydrogenase 20 (Rdh20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Rdhs; 1810054F20Rik; SDR-O	Rdhs; 1810054F20Rik; SDR-O
Mus musculus	RefSeq	ILMN_202607	ILMN_257811	ZFP142	NM_029888.2	NM_029888.2		77264	141801887	NM_029888.2	Zfp142	NP_084164.1	ILMN_1228705	000510600	S	676	GCTGGTAGAGGCCACAGCTACTGAAGAGGGTCCAGGGAACATGGAGATCA	1	-	74632011-74632060	1qC3	Mus musculus zinc finger protein 142 (Zfp142), mRNA.				mKIAA0236; 9330177B18Rik; BB154236	mKIAA0236; 9330177B18Rik; BB154236
Mus musculus	RefSeq	ILMN_194048	ILMN_257811	ZFP142	NM_029888.2	NM_029888.2		77264	141801887	NM_029888.2	Zfp142	NP_084164.1	ILMN_1233408	007040703	S	5639	CCCACAGTGCATCTACATGATGTGAAGCTGGAAGATCCCAGCCCTCCTGC	1	-	74613485-74613534	1qC3	Mus musculus zinc finger protein 142 (Zfp142), mRNA.				mKIAA0236; 9330177B18Rik; BB154236	mKIAA0236; 9330177B18Rik; BB154236
Mus musculus	Riken	ILMN_204749	ILMN_204749	B930067N07RIK	ri|B930067N07|PX00164D18|AK047468|2062					AK047468	B930067N07Rik		ILMN_1227371	005490154	S	1897	GACCAACCAAGCAAACAAGCACTGCCTTTAACCCCAGTCCTGTCTCAGAG										
Mus musculus	MEEBO	ILMN_192969	ILMN_192969	FBXW2	scl19407.9_43				31980722	NM_013890	Fbxw2		ILMN_2493021	002140373	S	9	CAGTCATGTGCTTTTTCTGGCTTGTTTCCTCAGATGTGTGATCGGCTAAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]			
Mus musculus	MEEBO	ILMN_192969	ILMN_192969	FBXW2	scl19407.9_43				31980722	NM_013890	Fbxw2		ILMN_2761081	005390022	S	1848	ATCACATGGAGTCTGTTATTAAAGTTTTTTTCCAATAGCCTTTGTTCTTT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]			
Mus musculus	RefSeq	ILMN_235895	ILMN_235895	EG546282	NM_001081657.1	NM_001081657.1		546282	126090645	NM_001081657.1	EG546282	NP_001075126.1	ILMN_2821951	004280577	S	72	CGGCTCTGCTCAGGGTTGTTGGACAGTTAACCGAGAAGACAACTGAGCAC	X	-	24350712-24350727:24352185-24352218	XqA2	Mus musculus predicted gene, EG546282 (EG546282), mRNA.				MGC118208	MGC118208
Mus musculus	MEEBO	ILMN_184162	ILMN_184162	A930038B10RIK	scl00320323.1_209				51768341	XM_488701	A930038B10Rik		ILMN_2416369	002140280	S	14	CACAGGGATGTGACAAATGTCGAAGACCAGCACTTGAAGAGTTTCTTGCC										
Mus musculus	RefSeq	ILMN_218962	ILMN_218962	AU040829	NM_175003.3	NM_175003.3		216831	151108448	NM_175003.3	AU040829	NP_778168.2	ILMN_2702434	000840360	S	3890	GTGTGAACTCACCCGTCTCTGAGAGTGGGATCTGCAGACTCGACCTTACA				11qB3	Mus musculus expressed sequence AU040829 (AU040829), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AW493732; Rich2; AI840762; 6330543G20	AW493732; Rich2; AI840762; 6330543G20
Mus musculus	RefSeq	ILMN_200446	ILMN_200446	LOC381719	XM_205540.2	XM_205540.2			38081980	XM_205540.2	LOC381719		ILMN_2538791	003710110	S	2975	GGAATGCAGGGACTAATGGAGGAGGCTCCCACTATGATCCTTTGCTCAGG										
Mus musculus	RefSeq	ILMN_209946	ILMN_209946	LEPR	NM_010704.1	NM_010704.1		16847	8567369	NM_010704.1	Lepr	NP_034834.1	ILMN_2600710	000830020	S	3232	CCACAGTACTTACAGATCTTTAAACAACTTTAAAGGGCTTTATGTTGTTG	4	+	101464720-101464769	4qC6	Mus musculus leptin receptor (Lepr), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IGI]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IGI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence TAS]	db; LEPROT; OB-RGRP; obl; Obr; MGC105189; obese-like; diabetes	db; LEPROT; OB-RGRP; obl; Obr; MGC105189; obese-like; diabetes
Mus musculus	MEEBO	ILMN_187370	ILMN_187370	FIBP	scl52842.4.1_43				10946807	NM_021438	Fibp		ILMN_2674132	001470259	S	885	TTTGTGGACCTCGTGGAGAAGTTTGTGGAACCCTGCCGCTCTGACCACTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with fibroblast growth factor [goid 17134] [evidence IEA]		
Mus musculus	RefSeq	ILMN_238858	ILMN_238858	HNRPA3	NM_146130.2	NM_146130.2		229279	31559915	NM_146130.2	Hnrpa3	NP_666242.2	ILMN_3086092	003310601	A	560	GACACAGTTGATAAAATTGTTGTTCAGAAATACCACACTATTAATGGGCA	2	+	75500152-75500163:75500544-75500581	2qC3	Mus musculus heterogeneous nuclear ribonucleoprotein A3 (Hnrpa3), transcript variant b, mRNA.				2610510D13Rik; MGC101940; 2410013L13Rik; 2610209F03Rik; hnRNPA3; MGC37309	2610510D13Rik; MGC101940; 2410013L13Rik; 2610209F03Rik; hnRNPA3; MGC37309
Mus musculus	Riken	ILMN_203358	ILMN_203358	PTPRC	ri|E430029I06|PX00100F23|AK088875|3432					AK088875	Ptprc		ILMN_1241948	000380300	S	2990	CCTTGGGAGAGCTTAGATGTCCCCTAGCGAAATCTCCTGCTTGCAAGACT						The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]	The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that modulates the frequency, rate or extent of B cell differentiation [goid 45577] [evidence IMP]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IDA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B- or T cell [goid 50857] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the cytokine and chemokine mediated signaling pathway [goid 1960] [evidence IDA]; Any process that stops, prevents, or reduces the rate of T cell mediated cytotoxicity [goid 1915] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IMP]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50732] [evidence IMP]; Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues [goid 31953] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation [goid 45588] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IMP]; Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues [goid 31953] [evidence IMP]; Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell [goid 50855] [evidence IMP]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IMP]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of T cell mediated immunity [goid 2711] [evidence IMP]; The attachment of a cell to a cell of a different type via adhesion molecules [goid 34113] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2925] [evidence IMP]; Any process that modulates the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2923] [evidence IMP]	Interacting selectively with a heparan sulfate proteoglycan, any proteoglycan containing heparan sulfate as the glycosaminoglycan carbohydrate unit [goid 43395] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199158	ILMN_199158	LOC216963	XM_126291.5	XM_126291.5			38091495	XM_126291.5	LOC216963		ILMN_2534253	006960164	S	3016	AACCAGAGTAGTGGAACCAGCATTGGAAGTCAGCCCCTCTCCCCCCACCT										
Mus musculus	RefSeq	ILMN_241959	ILMN_241959	SIX5	NM_011383.1	NM_011383.1		20475	73532775	NM_011383.1	Six5	NP_035513.1	ILMN_2995454	001090347	S	2605	ACCCATTTCCCAAAATTTCCTGAGAGACCAGGGTGGCCTAGGGACAGCCC	7	+	19683446-19683495	7qA3	Mus musculus sine oculis-related homeobox 5 homolog (Drosophila) (Six5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]	TrexBF; MDMAHP; Dmahp	TrexBF; MDMAHP; Dmahp
Mus musculus	Riken	ILMN_202248	ILMN_202248	3526402I12RIK	ri|3526402I12|PX00010K13|AK014392|2710					AK014392	3526402I12Rik		ILMN_1239500	005420187	S	2418	GAAGGCAACACTTTCTTTCAGTTGTGATCTACTCCGCGAGCTCTGATGTG										
Mus musculus	Riken	ILMN_205428	ILMN_205428	E330010G16RIK	ri|E330010G16|PX00212A03|AK054283|4008					AK054283	E330010G16Rik		ILMN_2572482	004920707	S	3692	TGCCGTGGGACGGGCAGTCGAGTCTAATAGTGAAGGGCATGGATGCAGAC										
Mus musculus	RefSeq	ILMN_220194	ILMN_257495	NKX6-3	XM_910682.2	XM_910682.2		74561	94383251	XM_910682.2	Nkx6-3	XP_915775.1	ILMN_2718920	004860162	S	1782	AGAGAGAAGGGCTCTGAATGCCACACTCCTCCAATAGGGACACCAGACTG				8qA2	PREDICTED: Mus musculus NK6 transcription factor related, locus 3 (Drosophila) (Nkx6-3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_221008	ILMN_221008	EIF2S3Y	NM_012011.1	NM_012011.1		26908	7242147	NM_012011.1	Eif2s3y	NP_036141.1	ILMN_1241001	006960730	S	1653	GTTGTAGCTTGATAGTTAACAACTGTTGCTGTGCACCACTGAACTTACAG	Y	+	364923-364972	YqA1	Mus musculus eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked (Eif2s3y), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	Tfy; Spy; Eif-2gy	Tfy; Spy; Eif-2gy
Mus musculus	RefSeq	ILMN_220410	ILMN_220410	NCKAP1L	NM_153505.4	NM_153505.4		105855	146149341	NM_153505.4	Nckap1l	NP_705725.1	ILMN_1253813	000940202	S	4506	GCAGTTAACCCCGTCCTTCATTCACACAGTCATTGCCAGGGAGGCTGGAG				15qF3	Mus musculus NCK associated protein 1 like (Nckap1l), mRNA.				4930568P13Rik; Hemp1; AI463083	4930568P13Rik; Hemp1; AI463083
Mus musculus	RefSeq	ILMN_258236	ILMN_258236	RILPL2	NM_030259.1	NM_030259.1		80291	13385073	NM_030259.1	Rilpl2	NP_084535.1	ILMN_2833985	006840685	S	964	CTGGAGAAAGCAAAGGAACAGAGTGTGTGGCTGCATCCCGCCTCCTCCAC	5	-	124913520-124913569	5qF	Mus musculus Rab interacting lysosomal protein-like 2 (Rilpl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC7036	MGC7036
Mus musculus	RefSeq	ILMN_185852	ILMN_315962	LOC100048832	XM_001473682.1	XM_001473682.1		100048832	149256042	XM_001473682.1	LOC100048832	XP_001473732.1	ILMN_2631939	003870692	S	1023	CTACTGGATAAACGAAGACGGAGAAGAGGAGCTGGCAACGCCCCCACTAG	6	-	144958570-144958597:144963815-144963836		PREDICTED: Mus musculus similar to branched chain aminotransferase 1, cytosolic (LOC100048832), mRNA.					
Mus musculus	RefSeq	ILMN_185852	ILMN_315962	LOC100048832	XM_001473682.1	XM_001473682.1		100048832	149256042	XM_001473682.1	LOC100048832	XP_001473732.1	ILMN_2656827	003190601	S	518	GCTTGAAAGCCTTTCGGGGAGTTGATAACAAGATCCGATTGTTCCGGCCG	6	-	144986266-144986315		PREDICTED: Mus musculus similar to branched chain aminotransferase 1, cytosolic (LOC100048832), mRNA.					
Mus musculus	RefSeq	ILMN_195163	ILMN_195163	TMLHE	NM_138758.1	NM_138758.1		192289	20270296	NM_138758.1	Tmlhe	NP_620097.1	ILMN_2513145	005550020	S	1984	AGCAACATTTGTAAAAAGTTTTTACCTTTTATAATTCATTTGACTAAGAA	X|NT_165789.2	+	333916-333965		Mus musculus trimethyllysine hydroxylase, epsilon (Tmlhe), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 45329] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of the reaction: N6,N6,N6-trimethyl-L-lysine + 2-oxoglutarate + O2 = 3-hydroxy-N6,N6,N6-trimethyl-L-lysine + succinate + CO2 [goid 50353] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IDA]	MGC130426; D430017M14Rik; Bbox2; TMLH	MGC130426; D430017M14Rik; Bbox2; TMLH
Mus musculus	RefSeq	ILMN_253622	ILMN_253622	DYRK1B	NM_001037957.1	NM_001037957.1		13549	83816921	NM_001037957.1	Dyrk1b	NP_001033046.1	ILMN_3053158	006200500	I	2466	GGGGAGATGGCCTTGCTCCTCCTCGCTGTACCCCCCAGTAAAAAGCTTTC	7	+	27896000-27896049	7qA3	Mus musculus dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b (Dyrk1b), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Mirk	Mirk
Mus musculus	RefSeq	ILMN_253622	ILMN_253622	DYRK1B	NM_001037957.1	NM_001037957.1		13549	83816921	NM_001037957.1	Dyrk1b	NP_001033046.1	ILMN_3129762	000010634	A	2100	CTCGCCTGGGTCTCCATGGTGTACCCCAGAGCACAGCAGCCAGCTCATGA	7	+	27895634-27895683	7qA3	Mus musculus dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b (Dyrk1b), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Mirk	Mirk
Mus musculus	RefSeq	ILMN_219488	ILMN_219488	FSIP1	NM_027759.2	NM_027759.2		71313	141803372	NM_027759.2	Fsip1	NP_082035.1	ILMN_2709494	005720500	S	1481	TGTAAAGTGTAACTATTCTTTTTATTTTTATAATACATCATGGTTCTCAA	2	-	118030754-118030803	2qE5	Mus musculus fibrous sheath-interacting protein 1 (Fsip1), mRNA.	A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IC ]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700012M13Rik; 4933432K11Rik	1700012M13Rik; 4933432K11Rik
Mus musculus	RefSeq	ILMN_216954	ILMN_224721	LOC631302	XM_919383.2	XM_919383.2		631302	94406915	XM_919383.2	LOC631302	XP_924476.1	ILMN_2677391	006280717	S	852	TTCCCCGGGCGCTGTGCTCCGCGCCAATGCAGAAGCCTCCCGAACCAAAC					PREDICTED: Mus musculus similar to Polyglutamine binding protein 1, transcript variant 3 (LOC631302), mRNA.					
Mus musculus	RefSeq	ILMN_230245	ILMN_230245	CCIN	NM_001002787.1	NM_001002787.1		442829	50582594	NM_001002787.1	Ccin	NP_001002787.1	ILMN_2956614	002120360	S	1750	GCTGGACCAAAAGATAGGTGAATGGCAGACCCTTGCCTGCCCACCTGAGG	4	+	44006353-44006402	4qB1	Mus musculus calicin (Ccin), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISO]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4933417A14Rik	4933417A14Rik
Mus musculus	Riken	ILMN_205190	ILMN_205190	D030026A21RIK	ri|D030026A21|PX00179D07|AK050850|2698					AK050850	D030026A21Rik		ILMN_1221585	001500195	S	2557	AGCACTGGGCAGGGGTGCTTCAGGACTCGTTAGGGAACCTCATGTGACCA										
Mus musculus	RefSeq	ILMN_198995	ILMN_198995	LOC237314	XM_136954.1	XM_136954.1			20856443	XM_136954.1	LOC237314		ILMN_1214175	001410056	S	794	TGACTCAGTGGACGGCCCTCACAACCCTGGACGATGCTAGATGTTCTGAA										
Mus musculus	RefSeq	ILMN_196694	ILMN_249949	DNAIC2	NM_001034878.2	NM_001034878.2		432611	114145545	NM_001034878.2	Dnaic2	NP_001030050.2	ILMN_1258216	006980438	S	1919	CCAGGCACCGTGAGATGCGACTGAAGGAGAAAGGCAAGGTGGAGGGCAAA	11	+	114615589-114615638	11qE2	Mus musculus dynein, axonemal, intermediate chain 2 (Dnaic2), mRNA.	A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence ISO]; The bundle of microtubules and associated proteins that forms the core of cilia in eukaryotic cells and is responsible for their movements [goid 35085] [evidence ISO]	The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence ISO]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence ISO]	C030015H18Rik; RP23-273C14.2; Dnai2; Gm728	C030015H18Rik; RP23-273C14.2; Dnai2; Gm728
Mus musculus	RefSeq	ILMN_197011	ILMN_258620	HMCN1	NM_001024720.3	NM_001024720.3		545370	154689978	NM_001024720.3	Hmcn1	NP_001019891.2	ILMN_1245853	001450347	S	17159	CTACACGTCCACTACGAGAGGCAGAGACCTACCGCATGAAGGTGGGAGCT				1qG1	Mus musculus hemicentin 1 (Hmcn1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]			Gm201	Gm201
Mus musculus	RefSeq	ILMN_213651	ILMN_213651	GPR26	NM_173410.3	NM_173410.3		233919	146198619	NM_173410.3	Gpr26	NP_775586.1	ILMN_1217361	002070619	S	2406	TCCTGGTGGCTCATTACCCACATTCTGCAACTTTGTCCTGAGAAAGCAGC				7qF3	Mus musculus G protein-coupled receptor 26 (Gpr26), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	9630036A11Rik; A730021D22	9630036A11Rik; A730021D22
Mus musculus	Riken	ILMN_207368	ILMN_207368	C230009C22RIK	ri|C230009C22|PX00666N04|AK082118|5148					AK082118	C230009C22Rik		ILMN_2587084	005960717	S	4983	CAGGCTGGCTGTGGCACCATGGGAGGAAGTATAGCTCAGAATTCTCCAAG										
Mus musculus	RefSeq	ILMN_212066	ILMN_212066	ARFL4	NM_025404.1	NM_025404.1		66182	13384791	NM_025404.1	Arfl4	NP_079680.1	ILMN_2622354	004260300	S	1123	GTGCATTTGGGGGTGAATTGAGAACATCTCCACAGTCGAGGAGAGGGGTC	11	+	101483683-101483732		Mus musculus ADP-ribosylation factor 4-like (Arfl4), mRNA.				1110036H21Rik; ARL6; AW456149	1110036H21Rik; ARL6; AW456149
Mus musculus	Riken	ILMN_204112	ILMN_204112	A730096F01RIK	ri|A730096F01|PX00153O12|AK043447|1643					AK043447	A730096F01Rik		ILMN_1228839	007650753	S	219	CCTACCAGGGCAGAGGGGGAAGCTGTGCGGAGCCAAGAGGAGAAATCCAG										
Mus musculus	RefSeq	ILMN_209893	ILMN_209893	AAAS	NM_153416.1	NM_153416.1		223921	23510310	NM_153416.1	Aaas	NP_700465.1	ILMN_2600198	006980632	S	404	TGGGTAAAGACAGCCTGCAGCTGGGCCCTGGCTCTCTGTGGCCGCGCCTC	15	-	102177134-102177183	15qF3	Mus musculus achalasia, adrenocortical insufficiency, alacrimia (Aaas), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence ISO]	The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence ISO]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ADRACALA; D030041N15Rik; GL003; AAA	ADRACALA; D030041N15Rik; GL003; AAA
Mus musculus	RefSeq	ILMN_209893	ILMN_209893	AAAS	NM_153416.1	NM_153416.1		223921	23510310	NM_153416.1	Aaas	NP_700465.1	ILMN_2686898	007610564	S	1527	CCACATACCTCTGTACTTTGTCAATGCTCAGTTTCCACGCTTTAGCCCAG	15	-	102168856-102168905	15qF3	Mus musculus achalasia, adrenocortical insufficiency, alacrimia (Aaas), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence ISO]	The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence ISO]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ADRACALA; D030041N15Rik; GL003; AAA	ADRACALA; D030041N15Rik; GL003; AAA
Mus musculus	RefSeq	ILMN_223094	ILMN_223094	PRKCH	NM_008856.3	NM_008856.3		18755	118130661	NM_008856.3	Prkch	NP_032882.2	ILMN_1239238	004900086	S	2676	ACTGCAGATGGGCGTCCTTCAAGCTCCCAACCTAAACCCAGTGTTGAGAG	12	+	74878547-74878596	12qC3	Mus musculus protein kinase C, eta (Prkch), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	Pkch	Pkch
Mus musculus	Riken	ILMN_202806	ILMN_202806	2210404I19RIK	ri|2210404I19|ZX00051H22|AK028130|880					AK028130	2210404I19Rik		ILMN_1255591	007330446	S	533	CCTCCAGCCTACCAATTTGCACCAACACCAGCCGAAGCCGAGGCAGGGAA										
Mus musculus	RefSeq	ILMN_257664	ILMN_257664	NDE1	NM_023317.1	NM_023317.1		67203	12963634	NM_023317.1	Nde1	NP_075806.1	ILMN_2945588	001260180	S	1541	GCTGGGCTTCATTCAGACACCATAGAGCAACCAGGGTGGTAAAGCCGGAG	16	+	14192541-14192590	16qA1	Mus musculus nuclear distribution gene E homolog 1 (A nidulans) (Nde1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A centrosome from which one pole of a mitotic or meiotic spindle is organized [goid 31616] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IMP]; The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell [goid 7020] [evidence IDA]; The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51298] [evidence IMP]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IMP]	mNudE; Nude; AU042936; 2810027M15Rik; AW822251	mNudE; Nude; AU042936; 2810027M15Rik; AW822251
Mus musculus	RefSeq	ILMN_186852	ILMN_257664	NDE1	NM_023317.1	NM_023317.1		67203	12963634	NM_023317.1	Nde1	NP_075806.1	ILMN_2690077	000360435	S	860	CCAGCGCTACCATCCGCCCAGGGTGTGGTCAAGCTTTTGCTTTAGGACCA	16	+	14191860-14191904:14191905-14191909	16qA1	Mus musculus nuclear distribution gene E homolog 1 (A nidulans) (Nde1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A centrosome from which one pole of a mitotic or meiotic spindle is organized [goid 31616] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IMP]; The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell [goid 7020] [evidence IDA]; The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51298] [evidence IMP]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IMP]	mNudE; Nude; AU042936; 2810027M15Rik; AW822251	mNudE; Nude; AU042936; 2810027M15Rik; AW822251
Mus musculus	RefSeq	ILMN_186852	ILMN_257664	NDE1	NM_023317.1	NM_023317.1		67203	12963634	NM_023317.1	Nde1	NP_075806.1	ILMN_2640883	005960452	S	1469	CAAGACACTGGACAACTTGCGTTGCACTGGCCTTTGTTACATCATCCCTA	16	+	14192469-14192518	16qA1	Mus musculus nuclear distribution gene E homolog 1 (A nidulans) (Nde1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A centrosome from which one pole of a mitotic or meiotic spindle is organized [goid 31616] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IMP]; The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell [goid 7020] [evidence IDA]; The directed movement of a vesicle along a microtubule, mediated by motor proteins [goid 47496] [evidence IGI]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51298] [evidence IMP]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IMP]	mNudE; Nude; AU042936; 2810027M15Rik; AW822251	mNudE; Nude; AU042936; 2810027M15Rik; AW822251
Mus musculus	Riken	ILMN_202128	ILMN_202128	MAN1B	ri|2900010F21|ZX00068E23|AK013515|943					AK013515	Man1b		ILMN_1259724	002850397	S	111	TCCGGAGGGGACCGAGTGGAACCGACCTACTGCAACTCGTCGTCTTCGCC										
Mus musculus	Riken	ILMN_203006	ILMN_203006	5930403H17RIK	ri|5930403H17|PX00055M04|AK031083|2422					AK031083	5930403H17Rik		ILMN_1240137	005960121	S	2317	GGTGGCAGCTTCAGGGGATCCAGTGGCCTCCACAAAAGAGCTGACATACA										
Mus musculus	RefSeq	ILMN_189104	ILMN_189104	USP53	NM_133857.3	NM_133857.3		99526	146149139	NM_133857.3	Usp53	NP_598618.1	ILMN_1252444	000510400	S	3651	GCTGCCAACAGCTACCCGTCCAGTTGTTCAACTAACAGTTTTCAGCCAGA				3qG1	Mus musculus ubiquitin specific peptidase 53 (Usp53), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	AA939927; mKIAA1350; Phxr3; Sp6	AA939927; mKIAA1350; Phxr3; Sp6
Mus musculus	Riken	ILMN_201821	ILMN_201821	DDC	ri|2610109O21|ZX00061I24|AK011834|1441					AK011834	Ddc		ILMN_1229396	007050176	S	1357	GGTGTTAGTCGTTCTGGGTCTGAGTTATCTGACTGCATCCACTTGACTGC							The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 42423] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids, as carried out by individual cells [goid 6519] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-tryptophan = tryptamine + CO2 [goid 4058] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211110	ILMN_211110	2010106E10RIK	NM_026333.3	NM_026333.3		67715	141803565	NM_026333.3	2010106E10Rik	NP_080609.2	ILMN_2612627	002450136	S	936	TTATATACCAAGGAAACACTACAAATATGATTTCCATGCTCTACATACTT	X	+	109671631-109671680	XqE1	Mus musculus RIKEN cDNA 2010106E10 gene (2010106E10Rik), mRNA.				RP23-336F13.4	RP23-336F13.4
Mus musculus	MEEBO	ILMN_184984	ILMN_184984	A430090J22	scl21872.3.1_149						A430090J22		ILMN_1232955	002810086	S	17	CTTTGAGCTTCAGGCTTACGGAGACTTCAACTCCCCAGAATGACTTGGGG										
Mus musculus	RefSeq	ILMN_209571	ILMN_209571	BC025446	NM_146058.1	NM_146058.1		223631	22165371	NM_146058.1	BC025446	NP_666170.1	ILMN_2915835	000130537	S	1398	TGGAGGGATGGCGATATGAGTGGAACTGAAGTGCATGTTGGGAAATTCAC	15	+	75049840-75049889	15qD3	Mus musculus cDNA sequence BC025446 (BC025446), mRNA.				MGC29251	MGC29251
Mus musculus	RefSeq	ILMN_209571	ILMN_209571	BC025446	NM_146058.1	NM_146058.1		223631	22165371	NM_146058.1	BC025446	NP_666170.1	ILMN_2915833	003840594	S	1276	AGGAGTATACTGTGGAGCCCACTGTGGCACATCAGACCTACCATGTTGAG	15	+	75049718-75049767	15qD3	Mus musculus cDNA sequence BC025446 (BC025446), mRNA.				MGC29251	MGC29251
Mus musculus	RefSeq	ILMN_221224	ILMN_221224	GABRA6	NM_008068.2	NM_008068.2		14399	153791905	NM_008068.2	Gabra6	NP_032094.2	ILMN_2732698	000060689	S	2065	TTTATACAGCATGCTGGTGGCCTTTACAATTTTACAAGAACTTTCAGTGG				11qA5	Mus musculus gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6 (Gabra6), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	alpha6; Gabra-6	alpha6; Gabra-6
Mus musculus	Riken	ILMN_204961	ILMN_204961	SEPT7	ri|D430043E23|PX00195I14|AK052529|2864					AK052529	Sept7		ILMN_1226120	000060397	S	2478	CAGACCTTAATGATTATTCCTAAATGTTGGTGGTAGGAGCCCTCTGGCAC						Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212591	ILMN_212591	KRT15	NM_008469.1	NM_008469.1		16665	6680601	NM_008469.1	Krt15	NP_032495.1	ILMN_2858930	004570278	S	1125	GGAGGCTCAGAACCAGGAGTACAACATGCTGCTGGACATCAAGACTCGGC	11	-	99994356-99994405	11qD	Mus musculus keratin 15 (Krt15), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	K15; AI528832; Krt1-15	K15; AI528832; Krt1-15
Mus musculus	RefSeq	ILMN_210354	ILMN_253638	5830415L20RIK	NM_001042501.1	NM_001042501.1		68152	109948294	NM_001042501.1	5830415L20Rik	NP_001035966.1	ILMN_2656200	007510326	S	1237	GTAGATAAGTATATTTTAATTTTCCCCATGTATACTTTGATTTACTTGGG	5	+	3569481-3569530	5qA1	Mus musculus RIKEN cDNA 5830415L20 gene (5830415L20Rik), mRNA.				2900022K02Rik	2900022K02Rik
Mus musculus	RefSeq	ILMN_210354	ILMN_253638	5830415L20RIK	NM_001042501.1	NM_001042501.1		68152	109948294	NM_001042501.1	5830415L20Rik	NP_001035966.1	ILMN_1257675	006550554	S	241	GAAAAAGAAGGGCTCCAAGGCTTTGGCTGAGTTTGAAGAAAAAATGAATG	5	+	3557771-3557820	5qA1	Mus musculus RIKEN cDNA 5830415L20 gene (5830415L20Rik), mRNA.				2900022K02Rik	2900022K02Rik
Mus musculus	Riken	ILMN_206220	ILMN_206220	C130086J11RIK	ri|C130086J11|PX00172H11|AK081910|2850					AK081910	C130086J11Rik		ILMN_1238725	001030524	S	2542	CATGAGCCCCCCATGAGCCATGCACATTCAACTTGTCTGCTGTTACACCT										
Mus musculus	RefSeq	ILMN_192400	ILMN_249502	MRPL47	NM_029017.1	NM_029017.1		74600	29826331	NM_029017.1	Mrpl47	NP_083293.1	ILMN_2723579	002230670	S	517	GGTCAAGAAAAGCCCAGACCCGGTGCTTGGAGAAGGGACATCTTTGGACG	3	-	32629011-32629060	3qA3	Mus musculus mitochondrial ribosomal protein L47 (Mrpl47), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	CGI-204; MTF/L47; NCM1; 4833424P18Rik	CGI-204; MTF/L47; NCM1; 4833424P18Rik
Mus musculus	RefSeq	ILMN_192400	ILMN_249502	MRPL47	NM_029017.1	NM_029017.1		74600	29826331	NM_029017.1	Mrpl47	NP_083293.1	ILMN_1226238	003800162	S	177	TGTCACATCTTTTCTCCAGTGTAAATTACTTCATACCACGTTGTCAAGGA	3	-	32633089-32633138	3qA3	Mus musculus mitochondrial ribosomal protein L47 (Mrpl47), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	CGI-204; MTF/L47; NCM1; 4833424P18Rik	CGI-204; MTF/L47; NCM1; 4833424P18Rik
Mus musculus	RefSeq	ILMN_211588	ILMN_211588	SEC13	NM_024206.4	NM_024206.4		110379	142385772	NM_024206.4	Sec13	NP_077168.2	ILMN_2617402	007550470	S	1127	CACCTGCCTTACTGGGATCCCATGTGTTTAGTAATTTAACGTCCAGCTGA	6	-	113678170-113678219	6qE3	Mus musculus SEC13 homolog (S. cerevisiae) (Sec13), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence ISA]		Sec13l1; 1110003H02Rik; Sec13r	Sec13l1; 1110003H02Rik; Sec13r
Mus musculus	RefSeq	ILMN_250371	ILMN_250371	LOC382133	NM_207162.1	NM_207162.1		382133	46810306	NM_207162.1	LOC382133	NP_997045.1	ILMN_2788502	004570577	S	641	CCTCCCAAAGTAGTTTTTCTTCAGGTGAGGGATGTCCACCTCGCCAGCGC	Y|NT_166398.1	+	22119-22168		Mus musculus similar to RIKEN cDNA 1700029H17 (LOC382133), mRNA.				MGC107100; MGC118214; MGC107099	MGC107100; MGC118214; MGC107099
Mus musculus	RefSeq	ILMN_221534	ILMN_221534	SNX16	NM_029068.2	NM_029068.2		74718	31560060	NM_029068.2	Snx16	NP_083344.2	ILMN_2736848	007040706	S	1568	TTATAGTGTCTTGCCTGTATATTGCTCCAGACTAGTGTGTTTGTGTGTGT	3	-	10418816-10418865	3qA1	Mus musculus sorting nexin 16 (Snx16), mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI117577; 4930522N22Rik; AI747675	AI117577; 4930522N22Rik; AI747675
Mus musculus	Riken	ILMN_201897	ILMN_201897	KIF24	ri|4933425J19|PX00020D06|AK016916|1754					AK016916	KIF24		ILMN_1217557	005550148	S	1485	GAGTGAGAAAGAAGCCTGTGCTCTGTACTTGACTGTTGGAGCCGGAGCTC										
Mus musculus	RefSeq	ILMN_220790	ILMN_249241	TMCO2	NM_001081312.1	NM_001081312.1		69469	124486794	NM_001081312.1	Tmco2	NP_001074781.1	ILMN_1258750	001170377	S	438	CCTGTCGTTGGGTCTGCAAGAGAAAATTTTGAAAAAACTTCAGATGGTGG	4	-	120778487-120778536	4qD2.2	Mus musculus transmembrane and coiled-coil domains 2 (Tmco2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700028F16Rik	1700028F16Rik
Mus musculus	Riken	ILMN_204253	ILMN_204253	A830095D02RIK	ri|A830095D02|PX00156I18|AK044149|2109					AK044149	A830095D02Rik		ILMN_1244454	005080056	S	1863	CCGTCTCTAGAATCCATTGTCAGCCTTCCTGCTGGGGAATGGGACTGCAG										
Mus musculus	RefSeq	ILMN_214716	ILMN_214716	OLFR734	NM_146664.1	NM_146664.1		258658	33239001	NM_146664.1	Olfr734	NP_666875.1	ILMN_2651094	006840066	S	760	GGACCATCCATCTACATTTATGCTCGCCCATTTGACTCGTTTTCTCTAGA	14	-	50939699-50939748	14qC1	Mus musculus olfactory receptor 734 (Olfr734), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR242-1	MOR242-1
Mus musculus	RefSeq	ILMN_210068	ILMN_210068	INHA	NM_010564.4	NM_010564.4		16322	118130058	NM_010564.4	Inha	NP_034694.3	ILMN_1239270	000240739	S	920	TGCAGAGGCCTCCCGAGGAACCCGCTGCGCATGCCTTCTGCCATCGAGCT	1	+	75506386-75506435	1qC4	Mus musculus inhibin alpha (Inha), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	AW555078	AW555078
Mus musculus	RefSeq	ILMN_211073	ILMN_211073	GSDMA2	NM_029727.2	NM_029727.2		76758	115270962	NM_029727.2	Gsdma2	NP_084003.2	ILMN_2612219	002190689	S	816	GCCAACCTTTAACCCCCTGTGTGTGCTTCAGAGACAAGGCAGTACTGTCC	11	+	98513883-98513932	11qD	Mus musculus gasdermin A2 (Gsdma2), mRNA.				2210411P14Rik; Gsdma2; 2210009F20Rik; Gsdml2; 2210006M16Rik; MGC130173; MGC130174; 2200001G21Rik	2210411P14Rik; Gsdma2; 2210009F20Rik; Gsdml2; 2210006M16Rik; MGC130173; MGC130174; 2200001G21Rik
Mus musculus	MEEBO	ILMN_210766	ILMN_210766	1700025H01RIK	scl49265.2.1_252	XM_358825.1			38080677	XM_358825.1	1700025H01Rik		ILMN_2608944	004640709	S	441	CTAGTAAGCCAGGAGGCAAAGCACATGAAGACGGCAGAGACCCTGACAGC										
Mus musculus	Riken	ILMN_202431	ILMN_202431	2310051P22RIK	ri|2310051P22|ZX00059F14|AK075905|599					AK075905	2310051P22Rik		ILMN_1253051	002650142	S	259	GGGGTCCCCAGAGCCTGTGAAAGAGCCAAAGGACAGCTCTGACAGTTCCA										
Mus musculus	MEEBO	ILMN_208773	ILMN_208773	C330016K18RIK	scl29840.12.1_42	XM_132642.4			38084548	XM_132642.4	C330016K18Rik		ILMN_2589374	004590343	S	1521	ATGGGAGAGAGGTGGGCGGGGAGACCACCCTCTAGTCCAGCGCTGCTCTT										
Mus musculus	MEEBO	ILMN_208773	ILMN_208773	C330016K18RIK	scl29840.12.1_42	XM_132642.4			38084548	XM_132642.4	C330016K18Rik		ILMN_1220327	003140332	S	1528	AGAGGTGGGCGGGGAGACCACCCTCTAGTCCAGCGCTGCTCTTCCAGACT										
Mus musculus	MEEBO	ILMN_218116	ILMN_218116	MAZ	scl000141.1_0	XM_133827.2			38087421	XM_133827.2	Maz		ILMN_1246192	005560491	S	1407	TTCACCACAGCAGCATACCTGCGCATCCACGCGGTGAAGGACCATGGGCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212094	ILMN_317685	LOC100046045	XR_032266.1	XR_032266.1		100046045	149270001	XR_032266.1	LOC100046045		ILMN_2627161	007570187	S	2434	GCAGGGTTTAATTTTCACCACGTGGCACCAGAGGTTGCTCCCCCTCAGGA					PREDICTED: Mus musculus similar to protocadherin gamma A3 (LOC100046045), misc RNA.					
Mus musculus	RefSeq	ILMN_218333	ILMN_218333	BRCA1	NM_009764.2	NM_009764.2		12189	31560811	NM_009764.2	Brca1	NP_033894.2	ILMN_1221657	007100044	S	6121	GCAGCTCTAAGTAACCCATTCTTCTTTAAATACACGGACTCTGATATGAA	11	-	101350375-101350424	11qD	Mus musculus breast cancer 1 (Brca1), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence TAS]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching [goid 43009] [evidence IMP]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence ISO]; The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51298] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IDA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IMP]; The cell cycle process whereby centrosome duplication and separation takes place. The centrosome cycle can operate with a considerable degree of independence from other processes of the cell cycle [goid 7098] [evidence IGI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISO]; Interacting selectively with damaged DNA [goid 3684] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218030	ILMN_218030	BPIL3	NM_199303.1	NM_199303.1		228796	40556281	NM_199303.1	Bpil3	NP_955007.1	ILMN_2690657	000290243	S	1404	CTTCCACTCCCAGACCTTCTGGCTATCAATTATAACCTGGCTGAGCTGGA	2	+	153737658-153737707	2qH1	Mus musculus bactericidal/permeability-increasing protein-like 3 (Bpil3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	Gm119	Gm119
Mus musculus	RefSeq	ILMN_224117	ILMN_244031	CYB5	NM_025797.3	NM_025797.3		109672	146134902	NM_025797.3	Cyb5	NP_080073.1	ILMN_2775098	007560639	S	445	ATCGCCTCTACATGGCAGAAGATTGACTTGTCTCTCCGAAGCCGAAGAAC				18qE4	Mus musculus cytochrome b-5 (Cyb5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IC ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence TAS]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	0610009N12Rik	0610009N12Rik
Mus musculus	MEEBO	ILMN_213241	ILMN_213241	CLCN4-2	scl012727.1_314	NM_011334.2			31981501	NM_011334.2	Clcn4-2		ILMN_1255684	003940026	S	2760	CAAAGGGGTATTCGCATGCTACTGTTAGATATTGGTTCCTAAAATTTTGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186534	ILMN_241470	ITGA1	NM_001033228.3	NM_001033228.3		109700	153791388	NM_001033228.3	Itga1	NP_001028400.2	ILMN_2436345	002750463	S	2197	CGTGATTGGAGCTCCCCTGGAAGACGACCACGCAGGAGCTGTGTACATTT				13qD2.2	Mus musculus integrin alpha 1 (Itga1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IMP]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IMP]; The migration of leukocytes from the blood vessels into the surrounding tissue [goid 45123] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Vla1; CD49A; E130012M19Rik	Vla1; CD49A; E130012M19Rik
Mus musculus	RefSeq	ILMN_223168	ILMN_223168	SLC10A2	NM_011388.2	NM_011388.2		20494	133893012	NM_011388.2	Slc10a2	NP_035518.1	ILMN_2760190	002260202	S	1362	GATTGGTCACAAGATATTCCTTGATTTCAAATTCACAGAAGCTTAAGCCT	8	-	5085840-5085889	8qA1.1	Mus musculus solute carrier family 10, member 2 (Slc10a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]	ISBT; ASBT	ISBT; ASBT
Mus musculus	RefSeq	ILMN_211226	ILMN_211226	MSLNL	NM_177822.3	NM_177822.3		328783	133891839	NM_177822.3	Mslnl	NP_808490.1	ILMN_1225423	001690184	S	2558	GATGGGACTCGGTGTTACTTGAATGTCACTTGCCCTCGATGGCGGATCTG	17	+	25885205-25885254	17qA3.3	Mus musculus mesothelin-like (Mslnl), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4732467B22	4732467B22
Mus musculus	RefSeq	ILMN_218393	ILMN_218393	KLF15	NM_023184.3	NM_023184.3		66277	118130317	NM_023184.3	Klf15	NP_075673.1	ILMN_1235255	005080692	S	1761	ATGCTGGGAAAAAGGAAGTGGGTCAAAAAAGCGTAGGGCTGCACTGTGAT	6	+	90424670-90424719	6qD1	Mus musculus Kruppel-like factor 15 (Klf15), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	1810013I09Rik; KKLF; CKLF; AW494632; AV048136	1810013I09Rik; KKLF; CKLF; AW494632; AV048136
Mus musculus	Riken	ILMN_201891	ILMN_201891	4933402G07RIK	ri|4933402G07|PX00019G06|AK016617|1030					AK016617	4933402G07Rik		ILMN_1213333	006840427	S	293	ACACGCGGAACTCGTCTGGAGATGAAGCTATAAAAGCAACACGCTGAAGC										
Mus musculus	MEEBO	ILMN_219127	ILMN_219127	1700125F08RIK	scl37925.3.1_73				51765640	XM_488557	1700125F08Rik		ILMN_1237057	003310730	S	529	CTCTACCTGGAAACCCAGGCGGCCAAGCTCATTCACCCTTTTGCCCCTCA										
Mus musculus	RefSeq	ILMN_199018	ILMN_199018	EG215895	XM_137040.1	XM_137040.1		215895	20858146	XM_137040.1	EG215895	XP_137040.1	ILMN_1226400	006660689	S	728	CAAGAAATAATACGGGAGCTTTCCTTCGCAAAGGTATCGTTGGAGACTGG	10	-	33486334-33486351:33487977-33488008	10qB1	PREDICTED: Mus musculus predicted gene, EG215895 (EG215895), mRNA.					
Mus musculus	RefSeq	ILMN_210221	ILMN_210221	SNF1LK	NM_010831.2	NM_010831.2		17691	110815829	NM_010831.2	Snf1lk	NP_034961.2	ILMN_1239463	000520563	S	3833	AAACCTGATGTCCCAGCGTGGTCCTCCGTGGGCCCCGTGGCCCATCCTAT	17	-	31981821-31981870	17qB1	Mus musculus SNF1-like kinase (Snf1lk), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [pmid 15177563] [evidence IEP]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Sik; Msk	Sik; Msk
Mus musculus	Riken	ILMN_203883	ILMN_203883	A630065D16RIK	ri|A630065D16|PX00146L21|AK042164|3563					AK042164	A630065D16Rik		ILMN_1249545	002140356	S	3346	GCTCACACCGGTCACCCAGATTTTGTGGCTAACCATGTCTTGCACTGTGG										
Mus musculus	RefSeq	ILMN_227163	ILMN_227163	MYLK2	NM_001081044.1	NM_001081044.1		228785	124486659	NM_001081044.1	Mylk2	NP_001074513.1	ILMN_3129011	006980541	A	2604	GACCACCAACACACAGGAACTCTGAGAGAGAAAGCCAGCCCGGGCCTGGA	2	+	152748454-152748503	2qH1	Mus musculus myosin, light polypeptide kinase 2, skeletal muscle (Mylk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + (myosin-light-chain) = ADP + (myosin-light-chain) phosphate [goid 4687] [evidence IEA]	BB138278; 9830004H17Rik	BB138278; 9830004H17Rik
Mus musculus	RefSeq	ILMN_194416	ILMN_227163	MYLK2	NM_001081044.1	NM_001081044.1		228785	124486659	NM_001081044.1	Mylk2	NP_001074513.1	ILMN_2506245	004070121	S	2814	ACAGGATGAACTGGCCCACGAGGAGTATGAAGCCATCGGGCAGACCCCAA	2	+	152748664-152748713	2qH1	Mus musculus myosin, light polypeptide kinase 2, skeletal muscle (Mylk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + (myosin-light-chain) = ADP + (myosin-light-chain) phosphate [goid 4687] [evidence IEA]	BB138278; 9830004H17Rik	BB138278; 9830004H17Rik
Mus musculus	RefSeq	ILMN_194416	ILMN_227163	MYLK2	NM_001081044.1	NM_001081044.1		228785	124486659	NM_001081044.1	Mylk2	NP_001074513.1	ILMN_1257739	006420068	S	1842	AGCAGTGCCTCGCCCACCCCTGGCTCAACAACCTGGCAGAAAAAGCCAAA	2	+	152746274-152746323	2qH1	Mus musculus myosin, light polypeptide kinase 2, skeletal muscle (Mylk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IMP]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + (myosin-light-chain) = ADP + (myosin-light-chain) phosphate [goid 4687] [evidence IEA]	BB138278; 9830004H17Rik	BB138278; 9830004H17Rik
Mus musculus	MEEBO	ILMN_216907	ILMN_216907	2810459M11RIK	scl17717.3_373				51705175	XM_484890	2810459M11Rik		ILMN_2676765	002000707	S	2928	GCAGCAGTGGCCCGTGGTTCCCAGCAGACAGAAAGACCTGGGTTTCACCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_203562	ILMN_203562	ZFP288	ri|9430009A01|PX00108G09|AK034574|3503					AK034574	Zfp288		ILMN_1258238	001850215	S	3424	CCCTTTGCCCTTTCTCCTAGAGTTATTTGCCACTGGCAGTTTGGAAAGTC										
Mus musculus	Riken	ILMN_205889	ILMN_205889	A430063E22RIK	ri|A430063E22|PX00137E18|AK040112|2647					AK040112	A430063E22Rik		ILMN_1256647	005270162	S	2285	CATCAAAAGCAGTGAGAGCAAGAACTCAGGCAGGGGCTGGAAGCTGGAGC										
Mus musculus	RefSeq	ILMN_192104	ILMN_192104	TUBB2A	NM_009450.1	NM_009450.1		22151	33859487	NM_009450.1	Tubb2a	NP_033476.1	ILMN_2485044	002900068	S	1535	CCTCTTTCAAGATCACAGTATTGTCTCAGAAATCTATATGAATAAAAAAG	13	-	34166149-34166198	13qA3.3	Mus musculus tubulin, beta 2a (Tubb2a), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	M(beta)2; Tubb2	M(beta)2; Tubb2
Mus musculus	RefSeq	ILMN_222467	ILMN_222467	RNUXA	NM_019996.2	NM_019996.2		56698	31981080	NM_019996.2	Rnuxa	NP_064380.2	ILMN_2804636	005860601	S	1456	GCCATTAAGACACTTCGGTTTTCTGACTCATCTTGGTGAACTATGCTTTG	18	+	56712787-56712836	18qD3	Mus musculus RNA U, small nuclear RNA export adaptor (Rnuxa), mRNA.				Phax; AU018701; 4933427L19Rik; 2810055C14Rik; D18Ertd65e; AU018854; p55	Phax; AU018701; 4933427L19Rik; 2810055C14Rik; D18Ertd65e; AU018854; p55
Mus musculus	RefSeq	ILMN_199371	ILMN_199371	MTRF1	NM_145960.3	NM_145960.3		211253	142357946	NM_145960.3	Mtrf1	NP_666072.2	ILMN_1230693	000020180	S	1669	GATGAAGAGGCCATTTCCGAATTTTTGGATGAAAGCCTTCAATCAGTGAA	14	+	79823264-79823313	14qD3	Mus musculus mitochondrial translational release factor 1 (Mtrf1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code) [goid 6415] [evidence IEA]	Involved in catalyzing the release of a nascent polypeptide chain from a ribosome [goid 3747] [evidence IEA]; A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site [goid 16149] [evidence IEA]	MGC19099; A830062K05Rik	MGC19099; A830062K05Rik
Mus musculus	RefSeq	ILMN_212555	ILMN_212555	SLC22A21	NM_019723.2	NM_019723.2		56517	118130534	NM_019723.2	Slc22a21	NP_062697.1	ILMN_1234533	000670553	S	1843	CCTCCGAACCTAAAGGCTTTTAACACCTGGTCCAGAAGCTGATTGAACTG	11	-	53764730-53764757:53764758-53764779	11qB1.3	Mus musculus solute carrier family 22 (organic cation transporter), member 21 (Slc22a21), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in the peroxisomal membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31231] [evidence IDA]	The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [evidence IDA]	Slc22a9; Octn3	Slc22a9; Octn3
Mus musculus	RefSeq	ILMN_217692	ILMN_230243	DGCR14	NM_022408.2	NM_022408.2		27886	126362978	NM_022408.2	Dgcr14	NP_071853.2	ILMN_2686472	004060554	S	1604	CCAGGAGCCACAAATATCTAGTGTTGTTCCCGTGGCCAGGTTGGCACATT	16	-	17907284-17907317:17907202-17907217	16qA3	Mus musculus DiGeorge syndrome critical region gene 14 (Dgcr14), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9499415] [evidence IEP]		D16H22S1269E; AI462402; DGCR14; ES2; Dgcr1; Dgsi	D16H22S1269E; AI462402; DGCR14; ES2; Dgcr1; Dgsi
Mus musculus	RefSeq	ILMN_209261	ILMN_209261	RNF125	NM_026301.2	NM_026301.2		67664	142350216	NM_026301.2	Rnf125	NP_080577.1	ILMN_2594109	004210463	S	1132	GAAAAGGAGGAAAGGGAAGAATTTGAAGTCACCAAAATCCAATTTAGCCA	18	+	21142147-21142196	18qA2	Mus musculus ring finger protein 125 (Rnf125), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4930553F04Rik	4930553F04Rik
Mus musculus	RefSeq	ILMN_209261	ILMN_209261	RNF125	NM_026301.2	NM_026301.2		67664	142350216	NM_026301.2	Rnf125	NP_080577.1	ILMN_1232600	004050541	S	394	GTCCATTTTGTCAGCGGGAACTGGATGAAGACTGCTTGCTGGATCATTGC	18	+	21137560-21137609	18qA2	Mus musculus ring finger protein 125 (Rnf125), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4930553F04Rik	4930553F04Rik
Mus musculus	RefSeq	ILMN_218990	ILMN_218990	1110017I16RIK	NM_026754.2	NM_026754.2		68527	141803179	NM_026754.2	1110017I16Rik	NP_081030.1	ILMN_2702839	004590551	S	674	AGCACCCATCTGATAGACACTTTCAGGATCGAAGCATAAAGGTTTTAAGC	2	+	4906709-4906758	2qA1	Mus musculus RIKEN cDNA 1110017I16 gene (1110017I16Rik), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IDA]		AW121955; Ucma	AW121955; Ucma
Mus musculus	RefSeq	ILMN_220039	ILMN_220039	ADAM4	NM_009620.1	NM_009620.1		11498	27923589	NM_009620.1	Adam4	NP_033750.1	ILMN_1249290	005290014	S	851	CTGTCCCCGGTGAAAATCCCCACCTTGATCCTTGGAGTGTTATGGCAGGT	12	-	82521965-82522014	12qD1	Mus musculus a disintegrin and metallopeptidase domain 4 (Adam4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]		AV274654; tMDCV	AV274654; tMDCV
Mus musculus	RefSeq	ILMN_220039	ILMN_220039	ADAM4	NM_009620.1	NM_009620.1		11498	27923589	NM_009620.1	Adam4	NP_033750.1	ILMN_1235132	000580333	S	2197	CGCATGATTCTTATCTTGGCTTCGATTCTTTTGGGTGCAGTTTTCAAAGC	12	-	82520619-82520668	12qD1	Mus musculus a disintegrin and metallopeptidase domain 4 (Adam4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]		AV274654; tMDCV	AV274654; tMDCV
Mus musculus	RefSeq	ILMN_220039	ILMN_220039	ADAM4	NM_009620.1	NM_009620.1		11498	27923589	NM_009620.1	Adam4	NP_033750.1	ILMN_2971964	004060112	S	1930	ACCTGTGGCCCTGGCAAATATTGTAAAGCTCAAAGATGTGTTGCTCATCC	12	-	82520886-82520935	12qD1	Mus musculus a disintegrin and metallopeptidase domain 4 (Adam4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]		AV274654; tMDCV	AV274654; tMDCV
Mus musculus	Riken	ILMN_202392	ILMN_202392	4930548G14RIK	ri|4930548G14|PX00035E04|AK016069|1186					AK016069	4930548G14Rik		ILMN_1239913	000070743	S	854	CAGGCAGTGCTGGGTTACATCTCCTGTGGTGGACATTCAATTAAATCGGG										
Mus musculus	MEEBO	ILMN_191615	ILMN_191615	A930011O12RIK	scl46184.5_151				51768497	XM_488712	A930011O12Rik		ILMN_2480654	006620220	S	5	GGCTGATTCACACTGAAGATATCAACAGCAGTGTTGAGAATTATGGTACC										
Mus musculus	RefSeq	ILMN_196388	ILMN_196388	8430401F14RIK	XM_147203.1	XM_147203.1			20892104	XM_147203.1	8430401F14Rik		ILMN_1216714	001500451	S	1	GGAAGCACCATGGATGGGTTTTGTGATCAGCAAGTCCCTTTTATGGTCCC										
Mus musculus	RefSeq	ILMN_201842	ILMN_311694	LOC100045679	XM_001474939.1	XM_001474939.1		100045679	149264796	XM_001474939.1	LOC100045679	XP_001474989.1	ILMN_1250018	005130743	S	384	GGAGACGACAAGCTAGACAGAGAGAGCAGGGCAAAGTTCCTGAGATGAGA					PREDICTED: Mus musculus hypothetical protein LOC100045679 (LOC100045679), mRNA.					
Mus musculus	RefSeq	ILMN_197924	ILMN_197924	LOC381031	XM_358489.1	XM_358489.1			38079687	XM_358489.1	LOC381031		ILMN_1233182	002230347	S	317	GCTCCTTCTGGCAACCTCTGGCAACAGTGTGGTCTGGTACAGTCACTATG										
Mus musculus	MEEBO	ILMN_216587	ILMN_216587	PCDHGC5	scl093708.1_126	NM_033583.2			31981447	NM_033583.2	Pcdhgc5		ILMN_1216284	002230110	S	4360	CCTTACAGTAGTAGTAGAAGATCCCCCTCCCCCGCTGGTGTAGAATAGCC						That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198902	ILMN_198902	LOC234882	XM_125096.3	XM_125096.3			38089527	XM_125096.3	LOC234882		ILMN_1216674	005690386	S	508	GGTGAAGTGTGCCCAGCTGGCTGGAAACCTGGCAGTGATACCATCAAACC										
Mus musculus	RefSeq	ILMN_185752	ILMN_314753	EG665903	XR_032058.1	XR_032058.1		665903	149233685	XR_032058.1	EG665903		ILMN_2624523	001030609	S	339	TGAAGTTTCCGTTAAAGGGAAACTCTTTGAAGATATACATCCATTTTTCT				1qA5	PREDICTED: Mus musculus predicted gene, EG665903 (EG665903), misc RNA.					
Mus musculus	Riken	ILMN_207232	ILMN_207232	G430008M12RIK	ri|G430008M12|PH00001B21|AK089939|1270					AK089939	G430008M12Rik		ILMN_1228980	001450026	S	1069	CCTCTCTGACGTGTGTGGGGTAGAGGGGAAGAATGCAAGCGCAGGACAGC										
Mus musculus	RefSeq	ILMN_220772	ILMN_220772	ZFP3	NM_177565.3	NM_177565.3		193043	83423531	NM_177565.3	Zfp3	NP_808233.1	ILMN_1221886	004200176	S	1709	CGTCCACTGAGTGTGTGCCAGTCGTCGGCCGAAAGTGATGAGGCAGTTTT	11	+	70584924-70584931:70584932-70584973	11qB3	Mus musculus zinc finger protein 3 (Zfp3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Fnp-1; AI854635; B230309J24; Zfp-3; RP23-326P7.13	Fnp-1; AI854635; B230309J24; Zfp-3; RP23-326P7.13
Mus musculus	RefSeq	ILMN_196749	ILMN_196749	KLRB1B	NM_030599.3	NM_030599.3		80782	34328453	NM_030599.3	Klrb1b	NP_085102.3	ILMN_2731002	002450400	S	1905	GCACCAGAGGACTTTCTCAGTGGCCATATATGCTACCAATGAATATGCTG	6	-	128763965-128764014	6qF3	Mus musculus killer cell lectin-like receptor subfamily B member 1B (Klrb1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity [goid 45953] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	Ly55d; Nkrp1d; NKR-P1D	Ly55d; Nkrp1d; NKR-P1D
Mus musculus	RefSeq	ILMN_196749	ILMN_196749	KLRB1B	NM_030599.3	NM_030599.3		80782	34328453	NM_030599.3	Klrb1b	NP_085102.3	ILMN_2646358	003850274	S	980	GTCTGTGTGACCTTTGCTGGTCTCTGTCCCTGAGGTCACCTGCAGACAGC	6	-	128764890-128764939	6qF3	Mus musculus killer cell lectin-like receptor subfamily B member 1B (Klrb1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity [goid 45953] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	Ly55d; Nkrp1d; NKR-P1D	Ly55d; Nkrp1d; NKR-P1D
Mus musculus	RefSeq	ILMN_196749	ILMN_196749	KLRB1B	NM_030599.3	NM_030599.3		80782	34328453	NM_030599.3	Klrb1b	NP_085102.3	ILMN_1226510	003930349	S	2025	GCTGTCTCCCAAAGGCAGGAACTTGACATTGACATAGGAGAGAGGAACCC	6	-	128763845-128763894	6qF3	Mus musculus killer cell lectin-like receptor subfamily B member 1B (Klrb1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity [goid 45953] [evidence IDA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]	Ly55d; Nkrp1d; NKR-P1D	Ly55d; Nkrp1d; NKR-P1D
Mus musculus	RefSeq	ILMN_218273	ILMN_218273	RBM47	NM_178446.2	NM_178446.2		245945	31342581	NM_178446.2	Rbm47	NP_848541.1	ILMN_2693777	006060551	S	2059	GATGGCAAGATCCACACAATGGAACACATGATCAGCCCCATTGCGGTGCA	5	-	66413954-66414003	5qC3.1	Mus musculus RNA binding motif protein 47 (Rbm47), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	9530077J19Rik; MGC18900	9530077J19Rik; MGC18900
Mus musculus	RefSeq	ILMN_218273	ILMN_218273	RBM47	NM_178446.2	NM_178446.2		245945	31342581	NM_178446.2	Rbm47	NP_848541.1	ILMN_2712578	004180360	S	1854	CGGAGGATATTCCGCTGGCCGTGGTATATATAGCCGATATCACGAAGGCA	5	-	66416278-66416327	5qC3.1	Mus musculus RNA binding motif protein 47 (Rbm47), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	9530077J19Rik; MGC18900	9530077J19Rik; MGC18900
Mus musculus	RefSeq	ILMN_218273	ILMN_218273	RBM47	NM_178446.2	NM_178446.2		245945	31342581	NM_178446.2	Rbm47	NP_848541.1	ILMN_2735673	000630537	S	2921	TTCAATATTTAAAGACACAAACTGTAGTGCTCTGAAATACTACATAAAAC	5	-	66409901-66409950	5qC3.1	Mus musculus RNA binding motif protein 47 (Rbm47), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	9530077J19Rik; MGC18900	9530077J19Rik; MGC18900
Mus musculus	RefSeq	ILMN_218273	ILMN_218273	RBM47	NM_178446.2	NM_178446.2		245945	31342581	NM_178446.2	Rbm47	NP_848541.1	ILMN_1259076	006420372	S	539	CCAAGCGAGCTGCCTGAACCTTCGAGAATTCTCTTGTTCTACCTTCCATA	5	-	66437360-66437409	5qC3.1	Mus musculus RNA binding motif protein 47 (Rbm47), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	9530077J19Rik; MGC18900	9530077J19Rik; MGC18900
Mus musculus	RefSeq	ILMN_218273	ILMN_218273	RBM47	NM_178446.2	NM_178446.2		245945	31342581	NM_178446.2	Rbm47	NP_848541.1	ILMN_2720836	006270243	S	2642	AGCAGGCCCGCGTTCATACATTTCTAAAAGACTTGCGACGCCTCACGCCT	5	-	66410180-66410229	5qC3.1	Mus musculus RNA binding motif protein 47 (Rbm47), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	9530077J19Rik; MGC18900	9530077J19Rik; MGC18900
Mus musculus	RefSeq	ILMN_208914	ILMN_208914	DHDH	NM_027903.3	NM_027903.3		71755	146141192	NM_027903.3	Dhdh	NP_082179.1	ILMN_2689940	004060603	S	146	ACCTGAACCGGGCCGAGGAGTTCGCACAGAAATTCAACATCCCCAAGGCC				7qB4	Mus musculus dihydrodiol dehydrogenase (dimeric) (Dhdh), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: D-xylose + NADP+ = D-xylono-1,5-lactone + NADPH [goid 47837] [evidence IEA]; Catalysis of the reaction: NADP+ + trans-1,2-dihydrobenzene-1,2-diol = NADPH + catechol [goid 47115] [evidence IEA]	AA591799; 1300018L09Rik	AA591799; 1300018L09Rik
Mus musculus	RefSeq	ILMN_208914	ILMN_208914	DHDH	NM_027903.3	NM_027903.3		71755	146141192	NM_027903.3	Dhdh	NP_082179.1	ILMN_1234086	003060066	S	2655	GAGGCTAGAAGCTTGCAGGCCTAGGGTCAACTATCAAAAGTGTGCTCTTC				7qB4	Mus musculus dihydrodiol dehydrogenase (dimeric) (Dhdh), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: D-xylose + NADP+ = D-xylono-1,5-lactone + NADPH [goid 47837] [evidence IEA]; Catalysis of the reaction: NADP+ + trans-1,2-dihydrobenzene-1,2-diol = NADPH + catechol [goid 47115] [evidence IEA]	AA591799; 1300018L09Rik	AA591799; 1300018L09Rik
Mus musculus	RefSeq	ILMN_217343	ILMN_217343	SCEL	NM_022886.2	NM_022886.2		64929	70909344	NM_022886.2	Scel	NP_075024.2	ILMN_2682120	003990091	S	2404	CATCTTGGTTTCCATTTTAACTGAGTTTCTTATCTTCCTACCTACATCCC	14	+	104011914-104011963	14qE2.3	Mus musculus sciellin (Scel), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IDA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC132820; MGC132819; 9230114I02Rik	MGC132820; MGC132819; 9230114I02Rik
Mus musculus	RefSeq	ILMN_218207	ILMN_218207	SNTB2	NM_009229.4	NM_009229.4		20650	145966767	NM_009229.4	Sntb2	NP_033255.1	ILMN_1217790	005570091	S	806	CCTGATAGCAGGAACACCTTGATCTTACGCTGCAAGGATACGGCCACAGC				8qD3	Mus musculus syntrophin, basic 2 (Sntb2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Snt2	Snt2
Mus musculus	MEEBO	ILMN_223948	ILMN_223948	2310044H10RIK	scl31415.7_3				37574073	NM_197991	2310044H10Rik		ILMN_1247131	005340681	S	1494	TGCTCTTGCACATGCGCCGCTGTGGGCATGGGGATTGCTGTGCAGCCTCA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_214125	ILMN_214125	ENAM	NM_017468.2	NM_017468.2		13801	142365727	NM_017468.2	Enam	NP_059496.1	ILMN_1231606	003140376	S	4008	AGGGAACAACTTAAAAGTATAAACGTAGATAAACTTAATGCAGATGAACA	5	+	88933592-88933641	5qE1	Mus musculus enamelin (Enam), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]			
Mus musculus	RefSeq	ILMN_214125	ILMN_214125	ENAM	NM_017468.2	NM_017468.2		13801	142365727	NM_017468.2	Enam	NP_059496.1	ILMN_2644531	000270554	S	1391	TGCTTGGGAAGGCAAACAAGCTACTCGTCCAGGAAACCCAACTTACGGTA	5	+	88930975-88931024	5qE1	Mus musculus enamelin (Enam), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]			
Mus musculus	RefSeq	ILMN_210924	ILMN_249691	TTC39B	NM_027238.2	NM_027238.2		69863	124248534	NM_027238.2	Ttc39b	NP_081514.1	ILMN_2610609	002450577	S	2064	CATCGGAGTGGCGTACTGTTTGGTCTACATACTTTCCCCTCTGGAATGAC	4	-	82872855-82872904	4qC3	Mus musculus tetratricopeptide repeat domain 39B (Ttc39b), mRNA.				AW215585; 9130422G05Rik; AI450603; RP23-17O21.2; AV103077	AW215585; 9130422G05Rik; AI450603; RP23-17O21.2; AV103077
Mus musculus	RefSeq	ILMN_187427	ILMN_249691	TTC39B	NM_027238.2	NM_027238.2		69863	124248534	NM_027238.2	Ttc39b	NP_081514.1	ILMN_1215670	006480192	S	8191	CTCCTCATTGCACTTGAGTTTGGCCTCCGTTAGTTCGTTTTTCAGCAATC	4	-	82866728-82866777	4qC3	Mus musculus tetratricopeptide repeat domain 39B (Ttc39b), mRNA.				AW215585; 9130422G05Rik; AI450603; RP23-17O21.2; AV103077	AW215585; 9130422G05Rik; AI450603; RP23-17O21.2; AV103077
Mus musculus	Riken	ILMN_203283	ILMN_203283	9430083C07RIK	ri|9430083C07|PX00110G05|AK035068|1964					AK035068	9430083C07Rik		ILMN_2556116	005570241	S	1150	ATTTGTGTGAGAGGGAGTGGTGCTCAGGGTTGAAGCCAGGGTGCTTAGCT										
Mus musculus	RefSeq	ILMN_210041	ILMN_252299	FBXO24	XM_916784.2	XM_916784.2		71176	94375507	XM_916784.2	Fbxo24	XP_921877.1	ILMN_2637347	005700360	S	1151	CCCCGGGGTGTATCGTGATCTCTTTGGGACCCTTCAAGCCTTTGACCCCC				5qG2	PREDICTED: Mus musculus F-box protein 24 (Fbxo24), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_216985	ILMN_216985	T2	NM_013682.1	NM_013682.1		21331	7305536	NM_013682.1	T2	NP_038710.1	ILMN_2677835	006620070	S	819	GTCCAAACAGGATATGACAGCTTTCTTTTTCTTTGAGTCTGCATTATGAT	17	+	8615065-8615114	17qA1	Mus musculus brachyury 2 (T2), mRNA.				brachyury2	brachyury2
Mus musculus	RefSeq	ILMN_198784	ILMN_198784	LOC272680	XM_195367.3	XM_195367.3			38087630	XM_195367.3	LOC272680		ILMN_2532913	007400609	S	573	CTACTGTGCCCCGGAACACTTGCAAGCAGAGAAATATGAGGGCCTCCCTG										
Mus musculus	RefSeq	ILMN_198313	ILMN_251980	GRXCR2	NM_001033426.2	NM_001033426.2		332309	142351124	NM_001033426.2	Grxcr2	NP_001028598.1	ILMN_1252942	004590161	S	582	AGCCCCCTGCCGGAGTCGGAGCGCACATTTCTTCATAGTCAGCACACACA	18	-	42151411-42151460	18qB3	Mus musculus glutaredoxin, cysteine rich 2 (Grxcr2), mRNA.					
Mus musculus	RefSeq	ILMN_212335	ILMN_224440	TSHZ1	NM_001081300.1	NM_001081300.1		110796	124486832	NM_001081300.1	Tshz1	NP_001074769.1	ILMN_1216265	005810184	S	4797	GGTCACAGGACCTGGTAGTGTCAAGTTTAACCCTTTGAGGACTTTATCTC	18	-	84181986-84182035	18qE4	Mus musculus teashirt zinc finger family member 1 (Tshz1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The biological process whose specific outcome is the progression of the soft palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The soft palate is the posterior portion of the palate extending from the posterior edge of the hard palate [goid 60023] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Tsh1; Sdccag33; teashirt1; 5730407I04Rik; D18Bwg1409e; KIAA4206; NY-CO-33; Mtsh1; mKIAA4206	Tsh1; Sdccag33; teashirt1; 5730407I04Rik; D18Bwg1409e; KIAA4206; NY-CO-33; Mtsh1; mKIAA4206
Mus musculus	RefSeq	ILMN_212278	ILMN_212278	RTN4R	NM_022982.2	NM_022982.2		65079	142371844	NM_022982.2	Rtn4r	NP_075358.1	ILMN_2624676	003130494	S	1731	CACCCCATCATGTTTACAGGGTTCCGGGGGTGGCGTTTGTTCCAGAACGC	16	+	18152161-18152210	16qA3	Mus musculus reticulon 4 receptor (Rtn4r), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	NgR; NOGOR	NgR; NOGOR
Mus musculus	RefSeq	ILMN_243993	ILMN_243993	AU015228	NM_001033197.1	NM_001033197.1		99169	85701611	NM_001033197.1	AU015228	NP_001028369.1	ILMN_2951701	005090341	S	2684	AGAGGCTTCTGACTGGCCATCATCTAAGAGCATAGGTGCAATTCTATGTG	2	+	129794518-129794567	2qF1	Mus musculus expressed sequence AU015228 (AU015228), mRNA.			Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]		
Mus musculus	Riken	ILMN_202881	ILMN_202881	A330088F01RIK	ri|A330088F01|PX00132P20|AK039692|1158					AK039692	A330088F01Rik		ILMN_1230472	005490102	S	1024	CCTCATACTTGGAGGACTAAGGGAGAAGGATGGCAAGTTCAAGACCAGCC										
Mus musculus	RefSeq	ILMN_216926	ILMN_216926	4930519N13RIK	NM_207204.1	NM_207204.1		78177	46402161	NM_207204.1	4930519N13Rik	NP_997087.1	ILMN_2677065	000780670	S	4118	TGCAGATCCTGCGGGTGGGAGGAAAGACGGCATCAGAGGTGGTGGCTCAG	2	-	150760490-150760539	2qG3	Mus musculus RIKEN cDNA 4930519N13 gene (4930519N13Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Gm1004; mKIAA0980; Gm1634	Gm1004; mKIAA0980; Gm1634
Mus musculus	RefSeq	ILMN_249312	ILMN_249312	2410016O06RIK	NM_023633.1	NM_023633.1		71952	12963762	NM_023633.1	2410016O06Rik	NP_076122.1	ILMN_2972325	006250370	S	2038	GGAAAGTTCGTGGCAGAAGTGGCCCTGACCCCTGTCCTTTCAGAGCACCA	12	+	84842455-84842504	12qD1	Mus musculus RIKEN cDNA 2410016O06 gene (2410016O06Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; Any complex of pre-rRNAs, ribosomal proteins, and associated proteins formed in the nucleolus during ribosome biogenesis [goid 30685] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]	NO66	NO66
Mus musculus	RefSeq	ILMN_232317	ILMN_232317	NLRP6	NM_001081389.1	NM_001081389.1		101613	124487066	NM_001081389.1	Nlrp6	NP_001074858.1	ILMN_2918203	006900025	S	3354	CTTGCTGCCTGAGAGATACAGGGAAGGAGCCAGAAGAGTGACAGCTTCCA	7	+	148113970-148114019	7qF5	Mus musculus NLR family, pyrin domain containing 6 (Nlrp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI504961; Nalp6; Pypaf5	AI504961; Nalp6; Pypaf5
Mus musculus	RefSeq	ILMN_198410	ILMN_248037	GM815	NM_001033407.2	NM_001033407.2		329047	141802721	NM_001033407.2	Gm815	NP_001028579.1	ILMN_2531589	004880521	S	402	GCCACAGAGATCCTTGAGCTTGCTCGTCGGTGGCTGAGTGAGGATGTTTC	19	+	26962921-26962921:26962922-26962970	19qC1	Mus musculus gene model 815, (NCBI) (Gm815), mRNA.					
Mus musculus	MEEBO	ILMN_224095	ILMN_224095	MYD88	scl35222.4_425				31543276	NM_010851	Myd88		ILMN_2774646	006100131	S	1806	GCATTCTAAAGCAACCTGTGTCAAGTGTAAACCTCCTCCACCTGTGTTAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IGI]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence TAS]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octomer oligosaccharide [goid 2238] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IMP]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IGI]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor and relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2755] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IGI]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IMP]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor and relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2755] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198189	ILMN_198189	LOC224882	XM_128720.2	XM_128720.2			38082621	XM_128720.2	LOC224882		ILMN_1221649	000050044	S	1013	ATGAAGGGGTAGAAGGCAGTAGGGAAGGGGACAGCAGGAGGAGCAGTGGA										
Mus musculus	RefSeq	ILMN_200504	ILMN_241595	SEZ6L	NM_019982.2	NM_019982.2		56747	124249081	NM_019982.2	Sez6l	NP_064366.2	ILMN_1238427	006400092	S	2605	TGCTGCTAGTGGGCACCACCATCCAGTACACCTGTAGCCCTGGCTTTGTG	5	-	112865384-112865433	5qF	Mus musculus seizure related 6 homolog like (Sez6l), mRNA. XM_922892 XM_987230 XM_991153 XM_991182 XM_991200 XM_991227	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI843918; BSRP-B; Acig1; AIG1; AW539724; mKIAA0927	AI843918; BSRP-B; Acig1; AIG1; AW539724; mKIAA0927
Mus musculus	RefSeq	ILMN_241595	ILMN_241595	SEZ6L	NM_019982.2	NM_019982.2		56747	124249081	NM_019982.2	Sez6l	NP_064366.2	ILMN_2805839	006580039	S	5724	CACACAGCCCTGGAGAAGGAGAAAGGGTTTAGCCTGAATGGGCACCCTGG	5	-	112848461-112848510	5qF	Mus musculus seizure related 6 homolog like (Sez6l), mRNA. XM_922892 XM_987230 XM_991153 XM_991182 XM_991200 XM_991227	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI843918; BSRP-B; Acig1; AIG1; AW539724; mKIAA0927	AI843918; BSRP-B; Acig1; AIG1; AW539724; mKIAA0927
Mus musculus	RefSeq	ILMN_217161	ILMN_217161	THOC5	NM_172438.3	NM_172438.3		107829	146149067	NM_172438.3	Thoc5	NP_766026.1	ILMN_2679755	004180673	S	1775	CTCCTCCATCCCACCGGTTTTCCGACTCTGTCTAAACTGGAAAGGGGAGA				11qA1	Mus musculus THO complex 5 (Thoc5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of macrophage differentiation [goid 45650] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700060C24Rik; A430085L24Rik; Sgk2; PK1.3; RP23-64E17.4; MGC49541; Fmip	1700060C24Rik; A430085L24Rik; Sgk2; PK1.3; RP23-64E17.4; MGC49541; Fmip
Mus musculus	RefSeq	ILMN_201155	ILMN_201155	LOC384869	XM_357908.1	XM_357908.1			38089509	XM_357908.1	LOC384869		ILMN_1235896	006180136	S	697	TGTGGCTTAGCACCAGACGGGTTGCAGAGTGTGGCAGGAGCTGTAGACCT										
Mus musculus	RefSeq	ILMN_211664	ILMN_211664	HOXA2	NM_010451.1	NM_010451.1		15399	6754229	NM_010451.1	Hoxa2	NP_034581.1	ILMN_2618302	005220259	S	953	CAGGCTCCCAATGGACACAATGGCGACTCCCAAACTTTCCCAGTTTCGCC	6	-	52113188-52113237	6qB3	Mus musculus homeo box A2 (Hoxa2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; Division of the brain into a series of semi-repetitive parts or segments [goid 35284] [evidence IMP]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process by which the anatomical structure of rhombomere 3 is generated and organized. Morphogenesis pertains to the creation of form. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order [goid 21658] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 2 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21568] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21569] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	HOX1.11; MGC151482; Hox-1.11; AI324701; MGC151484	HOX1.11; MGC151482; Hox-1.11; AI324701; MGC151484
Mus musculus	RefSeq	ILMN_211664	ILMN_211664	HOXA2	NM_010451.1	NM_010451.1		15399	6754229	NM_010451.1	Hoxa2	NP_034581.1	ILMN_2874270	007550451	S	1343	CGCCTTTGACCAGGTGGCTTTGCCTTCTTTTATTCTGGGAGTTGATTTTC	6	-	52112798-52112847	6qB3	Mus musculus homeo box A2 (Hoxa2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IMP]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IMP]; Division of the brain into a series of semi-repetitive parts or segments [goid 35284] [evidence IMP]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IGI]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IMP]; The process by which the anatomical structure of rhombomere 3 is generated and organized. Morphogenesis pertains to the creation of form. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order [goid 21658] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 2 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21568] [evidence IMP]; The process whose specific outcome is the progression of rhombomere 3 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21569] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IMP]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	HOX1.11; MGC151482; Hox-1.11; AI324701; MGC151484	HOX1.11; MGC151482; Hox-1.11; AI324701; MGC151484
Mus musculus	RefSeq	ILMN_216900	ILMN_216900	GALNT12	NM_172693.3	NM_172693.3		230145	141802625	NM_172693.3	Galnt12	NP_766281.1	ILMN_1259226	004810292	S	1837	GAATGTGCTGGGTGTCACAAGAGTGTGAATAAGCTTTGTACAGATTTTGA	4	+	47135535-47135584	4qB1	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (Galnt12), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	A630062B03Rik; 9130206E10	A630062B03Rik; 9130206E10
Mus musculus	RefSeq	ILMN_220088	ILMN_220088	NDUFB7	NM_025843.3	NM_025843.3		66916	146135003	NM_025843.3	Ndufb7	NP_080119.1	ILMN_2717460	001450138	S	30	CGGCTACTAAAGAAGGGTAAGGCAGAGTAGCCATGGGGGCGCACCTGACC				8qC2	Mus musculus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 (Ndufb7), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]	1110002H15Rik	1110002H15Rik
Mus musculus	RefSeq	ILMN_214538	ILMN_214538	TMEM9B	NM_020050.1	NM_020050.1		56786	10092670	NM_020050.1	Tmem9b	NP_064434.1	ILMN_1246495	006290168	S	206	GTGAGATGTAAATGCATCTGCCCTCCCTATAAAGAGAATCCTGGGCACAT	7	-	116893556-116893605	7qE3	Mus musculus TMEM9 domain family, member B (Tmem9b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			ICRFP703B1614Q5.3; AW539847; D7H11orf15; 2310004K06Rik	ICRFP703B1614Q5.3; AW539847; D7H11orf15; 2310004K06Rik
Mus musculus	RefSeq	ILMN_214538	ILMN_214538	TMEM9B	NM_020050.1	NM_020050.1		56786	10092670	NM_020050.1	Tmem9b	NP_064434.1	ILMN_2914880	001780521	S	1174	GCTGGCTTGTCAGCGTGCTGGCCTCCCCACTTGACTTTTGCACTGACTAC	7	-	116880340-116880349:116880350-116880389	7qE3	Mus musculus TMEM9 domain family, member B (Tmem9b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			ICRFP703B1614Q5.3; AW539847; D7H11orf15; 2310004K06Rik	ICRFP703B1614Q5.3; AW539847; D7H11orf15; 2310004K06Rik
Mus musculus	RefSeq	ILMN_214538	ILMN_214538	TMEM9B	NM_020050.1	NM_020050.1		56786	10092670	NM_020050.1	Tmem9b	NP_064434.1	ILMN_2914884	006840750	S	1245	CCTGTGGCTGCATTTCATGACCAGTTGGATCTGAAATGCCTGGGGGCTCC	7	-	116880269-116880318	7qE3	Mus musculus TMEM9 domain family, member B (Tmem9b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			ICRFP703B1614Q5.3; AW539847; D7H11orf15; 2310004K06Rik	ICRFP703B1614Q5.3; AW539847; D7H11orf15; 2310004K06Rik
Mus musculus	Riken	ILMN_202283	ILMN_202283	EPHB2	ri|5730439I23|PX00003P23|AK017630|2522					AK017630	Ephb2		ILMN_1240431	005690273	S	2423	ACACCCAGTTAGGTAGTGTCCTCTTGATCCTGGAGGGGTGAGTAGGATGG						The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IDA]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region [goid 21952] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IMP]; A process that increases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48170] [evidence IMP]; Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence IDA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; The process by which the anatomical structure of the optic nerve is generated and organized. Morphogenesis pertains to the creation of form. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain [goid 21631] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA];  [goid 8046] [evidence IDA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IDA];  [goid 5005] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218845	ILMN_218845	ITFG2	NM_133927.1	NM_133927.1		101142	19527141	NM_133927.1	Itfg2	NP_598688.1	ILMN_1252621	001980164	S	2032	CTGCCATTCAGCTGTATCCAGCACTGCCGTTCTCTAAAGTACCGTGCTGC	6	-	128359679-128359728	6qF3	Mus musculus integrin alpha FG-GAP repeat containing 2 (Itfg2), mRNA.				AI646725; 2700050P07Rik	AI646725; 2700050P07Rik
Mus musculus	RefSeq	ILMN_239705	ILMN_239705	SLC25A42	NM_001007570.1	NM_001007570.1		73095	56090651	NM_001007570.1	Slc25a42	NP_001007571.1	ILMN_2810937	000540707	S	2793	CAGCAGGTTGCACCATGTAGATGGTTGGCTTGAGCCCTGCATCAGGCAAC	8	-	72708477-72708526	8qB3.3	Mus musculus solute carrier family 25, member 42 (Slc25a42), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	2900084M01Rik; MGC37808	2900084M01Rik; MGC37808
Mus musculus	RefSeq	ILMN_211098	ILMN_211098	CSDA	NM_139117.2	NM_139117.2		56449	47059494	NM_139117.2	Csda	NP_620817.2	ILMN_1234336	003610228	S	1456	CGAAACTAACAACTACAAAGGGAACGAGCCAGCAAGTGTCCATCAAGCTG	6	-	131315232-131315281	6qF3	Mus musculus cold shock domain protein A (Csda), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Dpba; dbpA; Yb2; Ybx3; oxyR; MSY4	Dpba; dbpA; Yb2; Ybx3; oxyR; MSY4
Mus musculus	RefSeq	ILMN_212731	ILMN_211098	CSDA	NM_139117.2	NM_139117.2		56449	47059494	NM_139117.2	Csda	NP_620817.2	ILMN_2629657	007560035	S	125	ACGCCGCGACTGCCACCGCGCTAACCGCCGCCAACCGCCACCGAGGTGCC	6	-	131338294-131338343	6qF3	Mus musculus cold shock domain protein A (Csda), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Dpba; dbpA; Yb2; Ybx3; oxyR; MSY4	Dpba; dbpA; Yb2; Ybx3; oxyR; MSY4
Mus musculus	RefSeq	ILMN_211098	ILMN_211098	CSDA	NM_139117.2	NM_139117.2		56449	47059494	NM_139117.2	Csda	NP_620817.2	ILMN_2705078	004040341	S	872	AGCGGCGTTTCCCGCCTTACCACGTGGGACAGACCTTTGACCGTCGCTCA	6	-	131326021-131326070	6qF3	Mus musculus cold shock domain protein A (Csda), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IMP]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Dpba; dbpA; Yb2; Ybx3; oxyR; MSY4	Dpba; dbpA; Yb2; Ybx3; oxyR; MSY4
Mus musculus	MEEBO	ILMN_223893	ILMN_223893	1810073M12RIK	scl22717.15.1_30				31341022	NM_181400	1810073M12Rik		ILMN_1259340	001990553	S	3318	GGTCCAGGTTCTCCCCCAGCTAAAACAGAGGTATTCAGAAATGACTTTGC										
Mus musculus	RefSeq	ILMN_212098	ILMN_212098	PTDSS2	NM_013782.4	NM_013782.4		27388	146134407	NM_013782.4	Ptdss2	NP_038810.2	ILMN_1236683	000630017	S	2111	CCAGGGTGCTGTCACCATGGCTCCCTTGAGCAAATGGAACAAATAAAGTG				7qF5	Mus musculus phosphatidylserine synthase 2 (Ptdss2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 6659] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: CDP-diacylglycerol + L-serine = CMP + O-sn-phosphatidyl-L-serine [goid 3882] [evidence IMP]	AI988017; AI481134; PSS2	AI988017; AI481134; PSS2
Mus musculus	RefSeq	ILMN_199626	ILMN_199626	LOC383761	XM_357228.1	XM_357228.1			38075319	XM_357228.1	LOC383761		ILMN_1239282	003840053	S	557	CCGATGACAAACAGCCCTACGAGAAGAAGGCTGCCGAGCGAAGAACTTAT										
Mus musculus	MEEBO	ILMN_185952	ILMN_185952	TCRB-V8.2	scl0021607.1_80						Tcrb-V8.2		ILMN_2431390	002510138	S	6	CTAGAGGATCTGAGAAATGTGACTCCACCCAAGGTCTCCTTGTTTGAGCC										
Mus musculus	RefSeq	ILMN_185388	ILMN_240571	WDR44	NM_175180.2	NM_175180.2		72404	124249072	NM_175180.2	Wdr44	NP_780389.2	ILMN_2444133	006020180	S	2546	GTACGATCTACTAGAGGACGCAACAAGGTTGGAAGAAAAATTACTGGCAT	X	+	23377887-23377936	XqA2	Mus musculus WD repeat domain 44 (Wdr44), mRNA. XM_981046 XM_981082 XM_981124 XM_981163	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			DKFZp686L20145; RAB11BP; 2610034K17Rik; 9130203L06; RPH11	DKFZp686L20145; RAB11BP; 2610034K17Rik; 9130203L06; RPH11
Mus musculus	RefSeq	ILMN_185388	ILMN_240571	WDR44	NM_175180.2	NM_175180.2		72404	124249072	NM_175180.2	Wdr44	NP_780389.2	ILMN_1232063	005690364	S	3769	GAGCACCAGGCTTTGCTCACTTAAAAATAAGCCACATTAAGGAGTGAGTC	X	+	23382784-23382833	XqA2	Mus musculus WD repeat domain 44 (Wdr44), mRNA. XM_981046 XM_981082 XM_981124 XM_981163	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			DKFZp686L20145; RAB11BP; 2610034K17Rik; 9130203L06; RPH11	DKFZp686L20145; RAB11BP; 2610034K17Rik; 9130203L06; RPH11
Mus musculus	RefSeq	ILMN_201602	ILMN_233777	LOC384077	XM_918785.2	XM_918785.2		384077	94372890	XM_918785.2	LOC384077	XP_923878.1	ILMN_2543123	005700039	S	1	ATGAAATATTTTCTTCCTTTGGATGTTTCCTTAGCATCAGCCTACCTGAA				4qE1	PREDICTED: Mus musculus Unknown (protein for IMAGE:30033377), transcript variant 4 (LOC384077), mRNA.					
Mus musculus	RefSeq	ILMN_196726	ILMN_196726	HIST1H2AA	NM_175658.1	NM_175658.1		319163	28316755	NM_175658.1	Hist1h2aa	NP_783589.1	ILMN_1233518	000240341	S	95	ACCGGCTTCTCCGCCAAGGGAACTACGCACAACGAATTGGGGCTGGTGCA	13	+	24026425-24026474	13qA3.1	Mus musculus histone cluster 1, H2aa (Hist1h2aa), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC130330; MGC130331	MGC130330; MGC130331
Mus musculus	RefSeq	ILMN_214687	ILMN_214687	SPTLC1	NM_009269.2	NM_009269.2		268656	29244576	NM_009269.2	Sptlc1	NP_033295.2	ILMN_2703159	000450048	S	2244	CCGAGCTCTACACTGGCTGCCGTTGTCCTTAGCGAGCGTGTTGAGTGATA	13	-	53428393-53428442	13qB1	Mus musculus serine palmitoyltransferase, long chain base subunit 1 (Sptlc1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + L-serine = CoA + 3-dehydro-D-sphinganine + CO2 [goid 4758] [evidence IEA]	AW552086; E030036H05; C77762; Lcb1	AW552086; E030036H05; C77762; Lcb1
Mus musculus	RefSeq	ILMN_218407	ILMN_218407	OLFR1093	NM_146366.1	NM_146366.1		258363	22129566	NM_146366.1	Olfr1093	NP_666478.1	ILMN_2695437	004640315	S	636	GTACTTGGTGGGCTTGATTGAGATTGTTACCATCCTGATTGTTCTGGTCT	2	+	86626524-86626573	2qD	Mus musculus olfactory receptor 1093 (Olfr1093), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR179-6	MOR179-6
Mus musculus	RefSeq	ILMN_220440	ILMN_220440	CLCN3	NM_173876.2	NM_173876.2		12725	71061478	NM_173876.2	Clcn3	NP_776301.1	ILMN_1220272	005090392	S	70	GCAGGGGAAGGGAAAATGCCAGTCTTTTTAATCTAGCAAGCTTCTCGATC	8	-	63433448-63433497	8qB3.1	Mus musculus chloride channel 3 (Clcn3), transcript variant c, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]	Clc3	Clc3
Mus musculus	RefSeq	ILMN_222799	ILMN_222799	SLMO2	NM_025531.2	NM_025531.2		66390	31981271	NM_025531.2	Slmo2	NP_079807.1	ILMN_2754997	006660497	S	1312	GTACTTTGTGATTTCGCATGCTGTACTGTGGGCTGGTTATGTTAACCGAA	2	-	174290619-174290668	2qH4	Mus musculus slowmo homolog 2 (Drosophila) (Slmo2), mRNA.				RP23-6N18.1; AA407013; 2310042G06Rik	RP23-6N18.1; AA407013; 2310042G06Rik
Mus musculus	RefSeq	ILMN_189369	ILMN_320825	LOC100047046	XM_001477283.1	XM_001477283.1		100047046	149234068	XM_001477283.1	LOC100047046	XP_001477333.1	ILMN_2635387	000610148	S	267	CAACCCCAAAGGCTCCTGGCTACGAACTATACAAGACGCAATGTATGATT					PREDICTED: Mus musculus similar to monoacylglycerol O-acyltransferase 1 (LOC100047046), mRNA.					
Mus musculus	RefSeq	ILMN_241433	ILMN_241433	4933439C20RIK	NM_001004146.1	NM_001004146.1		236604	51921288	NM_001004146.1	4933439C20Rik	NP_001004146.1	ILMN_2944601	001070341	S	1856	GGTTGAGGCCTTGCCCTGCAGAAGTAGGGGACATGCTGCTATTGGTCTAG	11	+	3031652-3031701	11qA1	Mus musculus RIKEN cDNA 4933439C20 gene (4933439C20Rik), mRNA.				MGC65558; MGC103350	MGC65558; MGC103350
Mus musculus	RefSeq	ILMN_199997	ILMN_199997	LOC384167	XM_357461.1	XM_357461.1			38079615	XM_357461.1	LOC384167		ILMN_1255352	002230753	S	1	ATGCCTGCCTCCACTGCTAGAAGACTTCATGGGTGTGACCATCTGGGGCA										
Mus musculus	RefSeq	ILMN_223402	ILMN_223402	ST6GALNAC5	NM_012028.2	NM_012028.2		26938	31543708	NM_012028.2	St6galnac5	NP_036158.2	ILMN_2840985	006450398	S	2506	CGTGCCAAAGGGACTTTAGTGTGTCTAATGACAGGCTTGAGGGCAGCAGC	3	-	152757542-152757591	3qH3	Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 (St6galnac5), mRNA.	Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]	AI851940; Siat7e	AI851940; Siat7e
Mus musculus	RefSeq	ILMN_196575	ILMN_196575	E330018D03RIK	NM_177133.2	NM_177133.2		320319	141802104	NM_177133.2	E330018D03Rik	NP_796107.1	ILMN_2605031	004490164	S	2617	GGAGCCCTGGGCCTTTAGAGGTGGTCTAGCAGGAGAGTTCCAGGTATCAA	19	-	45836667-45836716	19qC3	Mus musculus RIKEN cDNA E330018D03 gene (E330018D03Rik), mRNA.				FLJ10126	FLJ10126
Mus musculus	MEEBO	ILMN_222347	ILMN_222347	A530079E22RIK	scl16509.1.1_83	NM_177048.2			31342683	NM_177048.2	A530079E22Rik		ILMN_2748291	006330600	S	1406	CTCTGCTAAGTTACCGTGAGGAAGCTCCAGCAAATATCGTCAGAACGACG										
Mus musculus	RefSeq	ILMN_200417	ILMN_260331	NFXL1	NM_133921.2	NM_133921.2		100978	124301200	NM_133921.2	Nfxl1	NP_598682.2	ILMN_1233207	006380358	S	1882	CATTAGTAAAGCAGACTGGCAGGCATCAGCCATCAGGCCCTTGGGAGCAG	5	-	72919462-72919489:72920251-72920272	5qC3.2	Mus musculus nuclear transcription factor, X-box binding-like 1 (Nfxl1), mRNA.				TCF9; Gm1058; D430033A06Rik; AW538212; 1700012H24Rik; GCF; DNABF	TCF9; Gm1058; D430033A06Rik; AW538212; 1700012H24Rik; GCF; DNABF
Mus musculus	RefSeq	ILMN_200413	ILMN_260331	NFXL1	NM_133921.2	NM_133921.2		100978	124301200	NM_133921.2	Nfxl1	NP_598682.2	ILMN_1245740	000580072	S	780	TGCTACTGTGGAAAAGTAGAAGATCCACCTTTAGATCCGTGGCTTGTACC	5	-	72932169-72932218	5qC3.2	Mus musculus nuclear transcription factor, X-box binding-like 1 (Nfxl1), mRNA.				TCF9; Gm1058; D430033A06Rik; AW538212; 1700012H24Rik; GCF; DNABF	TCF9; Gm1058; D430033A06Rik; AW538212; 1700012H24Rik; GCF; DNABF
Mus musculus	RefSeq	ILMN_215982	ILMN_260331	NFXL1	NM_133921.2	NM_133921.2		100978	124301200	NM_133921.2	Nfxl1	NP_598682.2	ILMN_2665988	000520450	S	511	GAACAAAACAGTATCTGAATGAGGCTTTCCAAGCAGGGGCTATGACGTGC	5	-	72943917-72943966	5qC3.2	Mus musculus nuclear transcription factor, X-box binding-like 1 (Nfxl1), mRNA.				TCF9; Gm1058; D430033A06Rik; AW538212; 1700012H24Rik; GCF; DNABF	TCF9; Gm1058; D430033A06Rik; AW538212; 1700012H24Rik; GCF; DNABF
Mus musculus	RefSeq	ILMN_223023	ILMN_259121	PARP4	XM_994286.2	XM_994286.2		328417	149265621	XM_994286.2	Parp4	XP_999380.2	ILMN_2758215	000940528	S	5544	GCCCCAAGCCAACACTTCTCTTCACCGAATTCTATACTACAGCCAAGGCT	14	+	57278216-57278265	14qC3	PREDICTED: Mus musculus poly (ADP-ribose) polymerase family, member 4 (Parp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence TAS]	The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with any enzyme [goid 19899] [evidence ISA]		
Mus musculus	RefSeq	ILMN_222384	ILMN_259121	PARP4	XM_994286.2	XM_994286.2		328417	149265621	XM_994286.2	Parp4	XP_999380.2	ILMN_2748866	006270626	S	3920	TTTCGGAACTTGTTGCCAAAGAAGATGTTGACTTTCTACCATACGTGAGT	14	+	57256722-57256771	14qC3	PREDICTED: Mus musculus poly (ADP-ribose) polymerase family, member 4 (Parp4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence TAS]	The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]; Interacting selectively with any enzyme [goid 19899] [evidence ISA]		
Mus musculus	RefSeq	ILMN_212752	ILMN_224544	LOC665753	XM_979220.1	XM_979220.1		665753	94395215	XM_979220.1	LOC665753	XP_984314.1	ILMN_1235063	004070372	S	198	GGAGACCTACTGGAACCTTACTTCTATAGGCTACAAATGGGAAGACCATC	13	-	65501534-65501555:65501756-65501783	13qB3	PREDICTED: Mus musculus similar to zinc finger protein 197 (LOC665753), mRNA.					
Mus musculus	RefSeq	ILMN_200751	ILMN_323066	LOC434127	XR_034514.1	XR_034514.1		434127	149256516	XR_034514.1	LOC434127		ILMN_1239438	005560270	S	36	TGGCAGTCGGCAAGAACAAGTGCCTGAAGAAAGGTGGCAAGAAGGGAGCT	7	-	17305208-17305257	7qA2	PREDICTED: Mus musculus similar to ribosomal protein S3a (LOC434127), misc RNA.					
Mus musculus	Riken	ILMN_203670	ILMN_203670	9530005P22RIK	ri|9530005P22|PX00111F15|AK035253|3396					AK035253	9530005P22Rik		ILMN_1221840	001770138	S	3150	GTGTGGGCTGTTCTGGTTGTTGTGATTTGTGAAAGGCACACTGGACTCGA										
Mus musculus	RefSeq	ILMN_184685	ILMN_239445	1700009C05RIK	XM_923107.2	XM_923107.2		74220	94377721	XM_923107.2	1700009C05Rik	XP_928200.1	ILMN_1222354	000380445	S	562	GTGTGAATTTCTAGGAAGGAGAGTGACAGCGATGAACTTCCAAGTGGCTC				6qC3	PREDICTED: Mus musculus RIKEN cDNA 1700009C05 gene (1700009C05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_219804	ILMN_219804	NEU3	NM_016720.2	NM_016720.2		50877	118131105	NM_016720.2	Neu3	NP_057929.1	ILMN_2713763	005340291	S	2373	GCATCCACCCATTTCCAGGGGGACATTCTAACACTGCTGAACAGTCAGCT	7	-	106960867-106960916	7qE2	Mus musculus neuraminidase 3 (Neu3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates [goid 4308] [evidence IEA]; Catalysis of the hydrolysis of alpha-glycosidic linkages in oligo- or poly(sialic) acids [goid 16997] [evidence ISA]		
Mus musculus	MEEBO	ILMN_191982	ILMN_191982	MTDNA_ND1	mtDNA_ND1						mtDNA_ND1		ILMN_2483935	002360010	S	17	CCTCGTCCCCATTCTAATCGCCATAGCCTTCCTAACATTAGTAGAACGCA										
Mus musculus	MEEBO	ILMN_185882	ILMN_185882	PDLIM7	scl43921.12.1_95				42475997	NM_026131	Pdlim7		ILMN_2430813	006550609	S	19	GTGCTGGCCTAGCCCCAGTTCACTCTGGTGCCACAATAAACCTGTATCTA						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IPI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196449	ILMN_196449	5031409G23	XM_131217.3	XM_131217.3			38077719	XM_131217.3	5031409G23		ILMN_2524247	006130768	S	2858	AGGTAGCAGTGGTGGAGGAAGTGACATCAGCAGGGGCTATGGTGGAGACC										
Mus musculus	RefSeq	ILMN_199092	ILMN_233926	LIN28B	NM_001031772.1	NM_001031772.1		380669	78042602	NM_001031772.1	Lin28b	NP_001026942.1	ILMN_1217412	001030750	S	726	CGCCAGTTCTCAGGGAAGACAGGAGGCAGAATCCCAGCCATGCAGCTCTG	10	-	45101052-45101101	10qB2	Mus musculus lin-28 homolog B (C. elegans) (Lin28b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2810403D23Rik; Lin-28.2; D030047M17Rik	2810403D23Rik; Lin-28.2; D030047M17Rik
Mus musculus	RefSeq	ILMN_195212	ILMN_233926	LIN28B	NM_001031772.1	NM_001031772.1		380669	78042602	NM_001031772.1	Lin28b	NP_001026942.1	ILMN_2513525	006940497	S	5307	GTCTTTGTACCGAATGTCTTACTCTGTTGGCTATTGATGTTTAAAATTTC	10	-	45096471-45096520	10qB2	Mus musculus lin-28 homolog B (C. elegans) (Lin28b), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2810403D23Rik; Lin-28.2; D030047M17Rik	2810403D23Rik; Lin-28.2; D030047M17Rik
Mus musculus	RefSeq	ILMN_209390	ILMN_209390	SLC3A2	NM_008577.3	NM_008577.3		17254	142385690	NM_008577.3	Slc3a2	NP_032603.2	ILMN_2595359	003440270	S	1766	AGTCTTCCTCTCCTTGTTTTTAAACTTTTGCAGATTACATACGAATTCTT	19	-	8782105-8782154	19qA	Mus musculus solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 (Slc3a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	4F2HC; Mdu1; Ly-m10; 4F2; NACAE; AI314110; Ly-10; Ly10; Mgp-2hc; Cd98	4F2HC; Mdu1; Ly-m10; 4F2; NACAE; AI314110; Ly-10; Ly10; Mgp-2hc; Cd98
Mus musculus	Riken	ILMN_202747	ILMN_202747	9530062K07RIK	ri|9530062K07|PX00113K24|AK020619|788					AK020619	9530062K07Rik		ILMN_1236108	000520364	S	379	GGTTCAACGAAGCAGGAGTTTCTGAACATCTGAGCCATCTCTCCAGCCCT										
Mus musculus	RefSeq	ILMN_221564	ILMN_221564	PELP1	NM_029231.2	NM_029231.2		75273	38230104	NM_029231.2	Pelp1	NP_083507.2	ILMN_2787310	005690634	S	3334	TCGATTGTCCCCCTGACGATGAGAAGCCACCACCTGCTACAGAGCCTGAC	11	-	70209129-70209178	11qB3	Mus musculus proline, glutamic acid and leucine rich protein 1 (Pelp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		4930563C04Rik; MNAR; RP23-42P20.4	4930563C04Rik; MNAR; RP23-42P20.4
Mus musculus	RefSeq	ILMN_191538	ILMN_257281	B4GALNT3	NM_198884.1	NM_198884.1		330406	38566699	NM_198884.1	B4galnt3	NP_942585.1	ILMN_2760009	001580279	S	2724	GGGCTACTGGGAAGTAAATGGATTTGGACTGCTCGGGATCTACAAGTCTG	6	-	120156575-120156623:120157141-120157141	6qF1	Mus musculus beta-1,4-N-acetyl-galactosaminyl transferase 3 (B4galnt3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + N-acetyl-beta-D-glucosaminyl group = UDP + N-acetyl-beta-D-galactosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl group [goid 33842] [evidence IEA]	C330047A21; AB114826; B4GalNAcT3	C330047A21; AB114826; B4GalNAcT3
Mus musculus	RefSeq	ILMN_220056	ILMN_220056	KRTCAP3	NM_027221.1	NM_027221.1		69815	21312433	NM_027221.1	Krtcap3	NP_081497.1	ILMN_2859518	002370390	S	721	GGTGTTCTTCTGAGGCGCAGTCCACAGGTGTTTTCTACTACGCACGGGGG	5	+	31529679-31529728	5qB1	Mus musculus keratinocyte associated protein 3 (Krtcap3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Kcp3; AW321088; 2010001C09Rik; MGC129451; MGC129450	Kcp3; AW321088; 2010001C09Rik; MGC129451; MGC129450
Mus musculus	RefSeq	ILMN_218938	ILMN_218938	L1CAM	NM_008478.3	NM_008478.3		16728	112293278	NM_008478.3	L1cam	NP_032504.3	ILMN_3163582	006110296	S	3946	CAGTGGCAAGAAAGAGAAGGAGGCAGCAGGAGGCAATGACAGTTCAGGGG	X	-	71105580-71105588:71105690-71105730	XqA7.3	Mus musculus L1 cell adhesion molecule (L1cam), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IMP]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Any process that activates or increases the rate or extent of cell adhesion to another cell [goid 22409] [evidence IMP]; The attachment of one cell to another cell via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits [goid 33631] [evidence IMP]; The attachment of a cell to a second cell of the identical type via adhesion molecules [goid 34109] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IDA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with sialic acid, any of a variety of N- or O- substituted derivatives of neuraminic acid, a nine carbon monosaccharide. Sialic acids often occur in polysaccharides, glycoproteins, and glycolipids in animals and bacteria [goid 33691] [evidence IDA]	L1; CD171; NCAM-L1	L1; CD171; NCAM-L1
Mus musculus	RefSeq	ILMN_213288	ILMN_213288	SMU1	NM_021535.3	NM_021535.3		74255	141803589	NM_021535.3	Smu1	NP_067510.2	ILMN_2635633	007160187	S	1708	CTTGTAAATAAGTCAGTGTGATGTATTGAGGAGCTTCGGATTGATTCTTT	4	-	40684183-40684232	4qA5	Mus musculus smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) (Smu1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2610203K23Rik; SMU-1; AI845086; BWD; AW556129; 2600001O03Rik; AB044414	2610203K23Rik; SMU-1; AI845086; BWD; AW556129; 2600001O03Rik; AB044414
Mus musculus	RefSeq	ILMN_213288	ILMN_213288	SMU1	NM_021535.3	NM_021535.3		74255	141803589	NM_021535.3	Smu1	NP_067510.2	ILMN_2639454	006650242	S	746	GTCAGTATCTGGTCACTGGCTCTGTTGATGGATTTATTGAGGTGTGGAAC	4	-	40695595-40695644	4qA5	Mus musculus smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) (Smu1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			2610203K23Rik; SMU-1; AI845086; BWD; AW556129; 2600001O03Rik; AB044414	2610203K23Rik; SMU-1; AI845086; BWD; AW556129; 2600001O03Rik; AB044414
Mus musculus	RefSeq	ILMN_212652	ILMN_212652	MANSC1	NM_026345.2	NM_026345.2		67729	31981005	NM_026345.2	Mansc1	NP_080621.1	ILMN_2848273	007320576	S	2225	CCCCATTCCAGATAATGGCAACTGTTTGATACGAGTTTTAATGGGTCCTC	6	-	134575001-134575050	6qG1	Mus musculus MANSC domain containing 1 (Mansc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9130403P13Rik	9130403P13Rik
Mus musculus	RefSeq	ILMN_213506	ILMN_213506	RNF32	NM_021470.3	NM_021470.3		56874	32129275	NM_021470.3	Rnf32	NP_067445.2	ILMN_2923285	002070224	S	1009	CCAAGGAGGACTGGGAGAAAATCCAAGCACAGGCTGCTCACCATGAGATC	5	+	29555041-29555071:29555830-29555848	5qB1	Mus musculus ring finger protein 32 (Rnf32), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An inclusion body resulting from dynein-dependent retrograde transport of an aggregated protein on microtubules [goid 16235] [evidence ISA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Lmbr2; MGC107158; 1700009J01Rik; 2700025B22Rik; 4930542N22Rik	Lmbr2; MGC107158; 1700009J01Rik; 2700025B22Rik; 4930542N22Rik
Mus musculus	RefSeq	ILMN_211278	ILMN_211278	MAPKAPK2	NM_008551.1	NM_008551.1		17164	45544579	NM_008551.1	Mapkapk2	NP_032577.1	ILMN_2614212	004900142	S	2198	CTTCCTGGATTTCCACCATGTGGTCTGGTGGATGGGACAGTCTTCGCACC	1	-	132950600-132950649	1qE4	Mus musculus MAP kinase-activated protein kinase 2 (Mapkapk2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules [goid 48255] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MK2; Rps6kc1; AA960234	MK2; Rps6kc1; AA960234
Mus musculus	Riken	ILMN_206328	ILMN_206328	D330021K19RIK	ri|D330021K19|PX00191L08|AK084614|1770					AK084614	D330021K19Rik		ILMN_2579290	006590719	S	1364	GACCCCAGTGGAGGAGTTAGGGGAAGGACTGAATGAGCTGAAGGGGATTG										
Mus musculus	RefSeq	ILMN_188142	ILMN_232134	AKAP11	XM_001002157.2	XM_001002157.2		219181	149265811	XM_001002157.2	Akap11	XP_001002157.2	ILMN_2627006	005130431	S	5625	CCCGCAATTAAGGATTATTCTTCAGTGGCTCATTGCCTCTGAGGCTGAAG	14	-	78898688-78898737	14qD3	PREDICTED: Mus musculus A kinase (PRKA) anchor protein 11 (Akap11), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19207] [evidence ISO]		
Mus musculus	RefSeq	ILMN_188142	ILMN_232134	AKAP11	XM_001002157.2	XM_001002157.2		219181	149265811	XM_001002157.2	Akap11	XP_001002157.2	ILMN_2450121	002350646	S	8977	CTGCGGTTCTGCAGGCTCCTATTGCAGTCTGTTGTATGGTTTGGATACTA	14	-	78892448-78892497	14qD3	PREDICTED: Mus musculus A kinase (PRKA) anchor protein 11 (Akap11), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19207] [evidence ISO]		
Mus musculus	MEEBO	ILMN_187098	ILMN_187098	6720407G21RIK	scl0077733.1_79				51764005	XM_133272	6720407G21Rik		ILMN_1245282	000430438	S	12	GAACAACACAAAGTGAAAAGTGATAATAATGGTGCAGAAGGTGTAACAGC										
Mus musculus	RefSeq	ILMN_201524	ILMN_201524	RIN1	NM_145495.2	NM_145495.2		225870	118130150	NM_145495.2	Rin1	NP_663470.1	ILMN_2650289	002750348	S	4052	GGCTGCTGGATCTTCAAGGCTCTAAACAGCATGGCCCCCTATTCCATTAT	19	+	5056947-5056996	19qA	Mus musculus Ras and Rab interactor 1 (Rin1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200320	ILMN_200320	LOC386225	XM_359125.1	XM_359125.1			38081304	XM_359125.1	LOC386225		ILMN_1234992	003190070	S	17	GCTCAAAACAGCAGGAAGGCAAAGAGATTATGTGGGTCATATCTAGTCGC										
Mus musculus	RefSeq	ILMN_213071	ILMN_213071	ATP5A1	NM_007505.2	NM_007505.2		11946	126506325	NM_007505.2	Atp5a1	NP_031531.1	ILMN_2633229	006020746	S	2004	GCACCATTTGTAAAGGGTTACTCTTGTATTCCTGATGTACAGAAATCACA	18	+	78021180-78021229	18qE3	Mus musculus ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1 (Atp5a1), nuclear gene encoding mitochondrial protein, mRNA.	The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled [goid 45261] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IMP]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IMP]	Atpm; AI035633; D18Ertd206e; AL023067; AL022851	Atpm; AI035633; D18Ertd206e; AL023067; AL022851
Mus musculus	RefSeq	ILMN_221122	ILMN_221122	DSC2	NM_013505.3	NM_013505.3		13506	142348049	NM_013505.3	Dsc2	NP_038533.1	ILMN_2731310	003130291	S	3801	TTATCTTTTCTCATAAAATAGTTGGTGTGTATGCATATCATTGTTGGTTT	18	-	20189864-20189913	18qA2	Mus musculus desmocollin 2 (Dsc2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Dsc2a; AW228162; Dsc2b	Dsc2a; AW228162; Dsc2b
Mus musculus	RefSeq	ILMN_209294	ILMN_209294	GIPC1	NM_018771.3	NM_018771.3		67903	24475640	NM_018771.3	Gipc1	NP_061241.1	ILMN_2594419	001090468	S	292	CGGCAGCCCCACAGGCCGCATCGAGGGCTTCACTAATGTCAAGGAGCTGT	8	+	86185089-86185138	8qC2	Mus musculus GIPC PDZ domain containing family, member 1 (Gipc1), mRNA.	The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32435] [evidence IDA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IMP]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IPI]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	TIP-2; Rgs19ip1; Semcap1; TaxIP2; GIPC; Glut1CIP	TIP-2; Rgs19ip1; Semcap1; TaxIP2; GIPC; Glut1CIP
Mus musculus	RefSeq	ILMN_209294	ILMN_209294	GIPC1	NM_018771.3	NM_018771.3		67903	24475640	NM_018771.3	Gipc1	NP_061241.1	ILMN_1254924	002650349	S	628	TGAAGCCATCAACGGGCAGAGCCTGCTGGGCTGTCGGCATTACGAGGTTG	8	+	86186193-86186242	8qC2	Mus musculus GIPC PDZ domain containing family, member 1 (Gipc1), mRNA.	The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32435] [evidence IDA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IMP]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IPI]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	TIP-2; Rgs19ip1; Semcap1; TaxIP2; GIPC; Glut1CIP	TIP-2; Rgs19ip1; Semcap1; TaxIP2; GIPC; Glut1CIP
Mus musculus	RefSeq	ILMN_209294	ILMN_209294	GIPC1	NM_018771.3	NM_018771.3		67903	24475640	NM_018771.3	Gipc1	NP_061241.1	ILMN_1225966	005720632	S	1215	AAAGGCATGGGGTGCAAATGCCCTGTGGTCCTGGCCCCACTCCAATCAGT	8	+	86188287-86188336	8qC2	Mus musculus GIPC PDZ domain containing family, member 1 (Gipc1), mRNA.	The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32435] [evidence IDA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IMP]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IPI]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	TIP-2; Rgs19ip1; Semcap1; TaxIP2; GIPC; Glut1CIP	TIP-2; Rgs19ip1; Semcap1; TaxIP2; GIPC; Glut1CIP
Mus musculus	RefSeq	ILMN_209294	ILMN_209294	GIPC1	NM_018771.3	NM_018771.3		67903	24475640	NM_018771.3	Gipc1	NP_061241.1	ILMN_2942573	007210736	S	1568	CCACCTGCATCTGCATTCACAGTGCTGGGATTAAAGGTGTGCGTCACCAA	8	+	86188640-86188688	8qC2	Mus musculus GIPC PDZ domain containing family, member 1 (Gipc1), mRNA.	The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32435] [evidence IDA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IMP]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IPI]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	TIP-2; Rgs19ip1; Semcap1; TaxIP2; GIPC; Glut1CIP	TIP-2; Rgs19ip1; Semcap1; TaxIP2; GIPC; Glut1CIP
Mus musculus	RefSeq	ILMN_185592	ILMN_241245	UGT2A1	NM_053184.1	NM_053184.1		94215	16716476	NM_053184.1	Ugt2a1	NP_444414.1	ILMN_2434333	004570441	S	699	TTATACTAAAGCTTTAGGAAGACCCACCACACTGTGTGAGACTATGGGGA	5	-	87894551-87894581:87915054-87915072	5qE1	Mus musculus UDP glucuronosyltransferase 2 family, polypeptide A1 (Ugt2a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence ISA]		
Mus musculus	RefSeq	ILMN_218770	ILMN_218770	RPS19BP1	NM_175109.3	NM_175109.3		66538	70909364	NM_175109.3	Rps19bp1	NP_780318.1	ILMN_2699989	004760411	S	152	AAGGCCTCCCAGGCTCTGAAACTGCGGAACTCAGCGAAGGGAAAGGCGCC	15	-	80094426-80094475	15qE1	Mus musculus ribosomal protein S19 binding protein 1 (Rps19bp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI604923; S19BP; 2510038A11Rik	AI604923; S19BP; 2510038A11Rik
Mus musculus	RefSeq	ILMN_213127	ILMN_213127	PTGIR	NM_008967.1	NM_008967.1		19222	33468866	NM_008967.1	Ptgir	NP_032993.1	ILMN_2843394	007320202	S	2358	AGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGCCACAACGC	7	+	16069060-16069109	7qA2	Mus musculus prostaglandin I receptor (IP) (Ptgir), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a thromboxane (TXA) to initiate a change in cell activity [goid 4960] [evidence IEA]	IP	IP
Mus musculus	Riken	ILMN_205753	ILMN_205753	A430069L09RIK	ri|A430069L09|PX00137N13|AK040144|1773					AK040144	A430069L09Rik		ILMN_2574966	003450376	S	1694	TGCTGGGATTAAAGGCGTGCACCACCACGCCCAGCGTATTAGACAATTCT										
Mus musculus	Riken	ILMN_204506	ILMN_204506	B230326O19RIK	ri|B230326O19|PX00160F15|AK045955|3231					AK045955	B230326O19Rik		ILMN_1232569	001170368	S	3067	AAGTATCCCTGGGGCTCTGGGCTCAATCCTCAGCACTGTACAAATTGGCT										
Mus musculus	RefSeq	ILMN_233472	ILMN_233472	OLFR517	NM_001011846.1	NM_001011846.1		258136	58801449	NM_001011846.1	Olfr517	NP_001011846.1	ILMN_2913656	001770746	S	595	GCCTTCACAGGCACTGTTCTGATCATTTTGACTCCCTTCGTGCTGATTCT	7	-	116012022-116012071	7qE3	Mus musculus olfactory receptor 517 (Olfr517), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR268-4	MOR268-4
Mus musculus	MEEBO	ILMN_195184	ILMN_195184	SLC14A1	scl14832.1.1_161				31980716	NM_028122	Slc14a1		ILMN_2622915	003170414	S	1275	GAAAAGGATGGTTGAAAGCCCCCTGTAAGAGCAGCGCCGCCCAACAGCCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement into, out of or within the cell of urea, the water-soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle [goid 15840] [evidence IMP]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence IDA]	Enables the directed movement of water (H2O) into, out of, within or between cells [goid 5372] [evidence IDA]; Enables the directed movement of urea cross a membrane into, out of, within or between cells. Urea is the water soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle. It is the main nitrogen-containing (urinary) excretion product in ureotelic animals [goid 15204] [evidence IMP]		
Mus musculus	RefSeq	ILMN_213431	ILMN_236768	EG330097	XR_005168.1	XR_005168.1		330097	94374582	XR_005168.1	EG330097		ILMN_1250447	004120373	S	201	GAGGAGATGTACTTTGCTCAGCCCACAATTAATTATTGAAGTCCAAGGCC				5qC3.1	PREDICTED: Mus musculus predicted gene, EG330097 (EG330097), misc RNA.					
Mus musculus	RefSeq	ILMN_210607	ILMN_210607	GNB1L	NM_023120.4	NM_023120.4		13972	126273561	NM_023120.4	Gnb1l	NP_075609.2	ILMN_3059059	000150180	I	23	ACGAGGTGGCAGCAAGACCCTCGGGTCCGGTTGCGTTAGGCTCGGATCTT	16	+	18498986-18499035	16qA3	Mus musculus guanine nucleotide binding protein (G protein), beta polypeptide 1-like (Gnb1l), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ESTM55; Wdr14; Wdvcf	ESTM55; Wdr14; Wdvcf
Mus musculus	RefSeq	ILMN_210607	ILMN_210607	GNB1L	NM_023120.4	NM_023120.4		13972	126273561	NM_023120.4	Gnb1l	NP_075609.2	ILMN_3136271	003460196	A	3244	GTGTCATCTCATACAAGCTCTGTCCAACCTTCCCCACACACCGGGAGGCC	16	+	18566450-18566499	16qA3	Mus musculus guanine nucleotide binding protein (G protein), beta polypeptide 1-like (Gnb1l), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ESTM55; Wdr14; Wdvcf	ESTM55; Wdr14; Wdvcf
Mus musculus	MEEBO	ILMN_189315	ILMN_189315	ZBTB4	scl075580.3_2	XM_126150.2			38091432	XM_126150.2	Zbtb4		ILMN_2460190	001300259	S	13	TGTCCTCAACTTCATCTATAGTGCCCGGCTTGCACTCCCTGGCGGTGGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_222551	ILMN_250367	CLEC4A1	NM_199311.1	NM_199311.1		269799	47059160	NM_199311.1	Clec4a1	NP_955015.1	ILMN_1230708	002760259	S	1254	GGTAAGGAACCGGTCCTTCCATTTATGAGAGCATCAGCTCACCTTTGTAC	6	+	122884343-122884392	6qF2	Mus musculus C-type lectin domain family 4, member a1 (Clec4a1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	BC049354; Dcir4; MGC56880; mDcir4	BC049354; Dcir4; MGC56880; mDcir4
Mus musculus	RefSeq	ILMN_256343	ILMN_256343	OLFR1042	NM_001011777.1	NM_001011777.1		257941	58801329	NM_001011777.1	Olfr1042	NP_001011777.1	ILMN_3161343	001410671	S	398	CGGTCCGCATGCCTAGGGAGCTCTGTCTTCAGGTCATCACCAGCACATAC	2	-	86000078-86000127	2qD	Mus musculus olfactory receptor 1042 (Olfr1042), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR185-10	MOR185-10
Mus musculus	MEEBO	ILMN_220026	ILMN_220026	4930565A17	scl38876.3.1_18				51765642	XM_488558	4930565A17		ILMN_2716652	003120167	S	951	CCATAGTGAGAGTTTTCAAGAGACCCAGCAGACCTGAAGAAGGCGGCGGC										
Mus musculus	RefSeq	ILMN_223020	ILMN_223020	PLCXD1	NM_207279.1	NM_207279.1		403178	46402312	NM_207279.1	Plcxd1	NP_997162.1	ILMN_3094228	000010561	A	948	CAACATCACTGAGAACCTGTGCTACATCCTCCTGCACCCAGTGGACTCCC	5	+	110532436-110532485	5qF	Mus musculus phosphatidylinositol-specific phospholipase C, X domain containing 1 (Plcxd1), mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]	Gm576; A330045H12Rik	Gm576; A330045H12Rik
Mus musculus	RefSeq	ILMN_223020	ILMN_223020	PLCXD1	NM_207279.1	NM_207279.1		403178	46402312	NM_207279.1	Plcxd1	NP_997162.1	ILMN_3021892	005890482	I	1204	CTTCAGACCCAGCAGGCCAGGGCCCAGAATGTTCTGCTGTCATGATGCTG	5	+	110532692-110532741	5qF	Mus musculus phosphatidylinositol-specific phospholipase C, X domain containing 1 (Plcxd1), mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]	Gm576; A330045H12Rik	Gm576; A330045H12Rik
Mus musculus	RefSeq	ILMN_223020	ILMN_223020	PLCXD1	NM_207279.1	NM_207279.1		403178	46402312	NM_207279.1	Plcxd1	NP_997162.1	ILMN_2758190	000990414	S	1057	CCGGGGCAGAGCCCTCAATGCACCAACATCATCGCAGGCGACTTCGTGGA	5	+	110532545-110532594	5qF	Mus musculus phosphatidylinositol-specific phospholipase C, X domain containing 1 (Plcxd1), mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]	Gm576; A330045H12Rik	Gm576; A330045H12Rik
Mus musculus	RefSeq	ILMN_214326	ILMN_214326	BLMH	NM_178645.3	NM_178645.3		104184	146198820	NM_178645.3	Blmh	NP_848760.1	ILMN_2646878	001500411	S	1875	TTAGGGGAGGGTTAGCTAGGATTTGAACTCTCAACGCTGCATGCTGCCTC				11qB5	Mus musculus bleomycin hydrolase (Blmh), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IMP]	AI035728; MGC37104; MGC39026; MGC36899; BMH; BH	AI035728; MGC37104; MGC39026; MGC36899; BMH; BH
Mus musculus	RefSeq	ILMN_221011	ILMN_221011	SYCP3	NM_011517.1	NM_011517.1		20962	6755703	NM_011517.1	Sycp3	NP_035647.1	ILMN_2729882	003710450	S	939	TTTAAACTATAATATCCGAAATCATTAGCTTATTTAAGTGGAAGATTTTT	10	+	87935798-87935847	10qC1	Mus musculus synaptonemal complex protein 3 (Sycp3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]; A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them [goid 802] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The first division of meiosis in which homologous chromosomes are paired and segregated from each other, occurring in the constitutive absence of chiasmata [goid 705] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IDA]; The process by which paired chromosomes are physically detached from each other during female meiosis [goid 51309] [evidence NAS]; The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a female [goid 7066] [evidence IDA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IDA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Scp3; Cor1	Scp3; Cor1
Mus musculus	RefSeq	ILMN_192246	ILMN_246783	MUT	NM_008650.1	NM_008650.1		17850	6678969	NM_008650.1	Mut	NP_032676.1	ILMN_2650700	004570240	S	3156	CTATTACATAAAGTAAATGAATTTTCAGATCTAGAAACACGCTGATCTGT	17	+	41098508-41098557	17qB2	Mus musculus methylmalonyl-Coenzyme A mutase (Mut), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]	Interacting selectively with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 31419] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the reaction: (R)-2-methyl-3-oxopropanoyl-CoA = succinyl-CoA [goid 4494] [evidence IDA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the transfer of a functional group from one position to another within a single molecule [goid 16866] [evidence IEA]	D230010K02Rik	D230010K02Rik
Mus musculus	Riken	ILMN_203127	ILMN_203127	6330589A16RIK	ri|6330589A16|PX00044N03|AK032105|2793					AK032105	6330589A16Rik		ILMN_2554920	005810102	S	1946	GGATTCCCTGCCATGACACTGTTTATTTCATTTCTGTGACTGCTTGACTG										
Mus musculus	Riken	ILMN_202052	ILMN_202052	2610016D08RIK	ri|2610016D08|ZX00060H06|AK011411|1543					AK011411	2610016D08Rik		ILMN_1239814	001240338	S	1452	CAGGCCAGAGGTGTGGAATATACGCCTGGCTCTCTACAACTGGGTGTTCC										
Mus musculus	MEEBO	ILMN_184468	ILMN_184468	UBE3A	scl9042.1.1_328				7106440	NM_011668	Ube3a		ILMN_2428622	000020332	S	10	GAGTTGTTATACTGATTGAAAATAATGAATAAACTTTTGCTTACAAAAAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	MEEBO	ILMN_184468	ILMN_184468	UBE3A	scl9042.1.1_328				7106440	NM_011668	Ube3a		ILMN_2452619	002970373	S	2	CAGGGTATCCCTTGGTATTAATTGTTCCTGTTAGTGCTAGTTCTTGTATA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	MEEBO	ILMN_184468	ILMN_184468	UBE3A	scl9042.1.1_328				7106440	NM_011668	Ube3a		ILMN_2418874	002450397	S	5	GTACATAAACTGTTGCAGCATGTGAAGACGCTTTCAGCTATTCACTCCTA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IDA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	RefSeq	ILMN_229133	ILMN_229133	OTTMUSG00000015643	NM_001037929.1	NM_001037929.1		627302	85702319	NM_001037929.1	OTTMUSG00000015643	NP_001033018.1	ILMN_2967302	007400689	S	1645	CCTCATGTCTGGCTTTTGGGCTGGAACCATGCAGTTGGGGGCATAGTAGG	2	-	145241015-145241064	2qG1	Mus musculus predicted gene, OTTMUSG00000015643 (OTTMUSG00000015643), mRNA.					
Mus musculus	Riken	ILMN_205798	ILMN_205798	OSP94	ri|6330569N16|PX00315O21|AK032066|1997					AK032066	Osp94		ILMN_1240779	005860433	S	1873	TGATGTCATGTGCCTTTAATCTCAGGACCCAGGAGGCAGAGCCTGGCAGA										
Mus musculus	RefSeq	ILMN_218669	ILMN_218669	KCNK5	NM_021542.4	NM_021542.4		16529	146134923	NM_021542.4	Kcnk5	NP_067517.1	ILMN_1249949	004220026	S	1787	ACGAGCAGCTGATGAACGAATACAACAAGGCAGATAACCCCAGGGGCACG				14qA3	Mus musculus potassium channel, subfamily K, member 5 (Kcnk5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	TASK-2	TASK-2
Mus musculus	RefSeq	ILMN_218669	ILMN_218669	KCNK5	NM_021542.4	NM_021542.4		16529	146134923	NM_021542.4	Kcnk5	NP_067517.1	ILMN_1232263	006370164	S	3121	GGCATATAGGGCCAGAGCCCCCACACGTTAGGACAGTGAGAGGTGTGTAT				14qA3	Mus musculus potassium channel, subfamily K, member 5 (Kcnk5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	TASK-2	TASK-2
Mus musculus	RefSeq	ILMN_197742	ILMN_197742	LOC329190	XM_283627.2	XM_283627.2			38077757	XM_283627.2	LOC329190		ILMN_1219774	003520050	S	284	AAGGAACCGCCAGACTGATTTCCAGAAGTGGTTATACAAGCCTGCAATCC										
Mus musculus	RefSeq	ILMN_211161	ILMN_211161	E130112L23RIK	NM_198249.3	NM_198249.3		268739	142349829	NM_198249.3	E130112L23Rik	NP_937892.2	ILMN_2613157	004890458	S	2108	TTAGGAGGTCACAGGGACCTCTCCCCCAACCACTGGGCAGAGATACATCA	14	+	52611755-52611804	14qC2	Mus musculus RIKEN cDNA E130112L23 gene (E130112L23Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	FLJ10357; Gm669	FLJ10357; Gm669
Mus musculus	RefSeq	ILMN_209126	ILMN_209126	KLHL9	NM_172871.2	NM_172871.2		242521	124244067	NM_172871.2	Klhl9	NP_766459.2	ILMN_2592779	000830463	S	2227	GGCATAAAGTTTTTGATCTTCCTGAGTCGCTGGGTGGCATTCGGGCTTGC	4	-	88366136-88366185	4qC4	Mus musculus kelch-like 9 (Drosophila) (Klhl9), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1354; C530050O22Rik; 8030469P05; KIAA1354	mKIAA1354; C530050O22Rik; 8030469P05; KIAA1354
Mus musculus	RefSeq	ILMN_209126	ILMN_209126	KLHL9	NM_172871.2	NM_172871.2		242521	124244067	NM_172871.2	Klhl9	NP_766459.2	ILMN_1246060	006900491	S	2728	GCCAAGGTACAGCTACCTCCCTCTTGGATAGTTTTGGACAATCTGTTGTC	4	-	88365635-88365684	4qC4	Mus musculus kelch-like 9 (Drosophila) (Klhl9), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA1354; C530050O22Rik; 8030469P05; KIAA1354	mKIAA1354; C530050O22Rik; 8030469P05; KIAA1354
Mus musculus	RefSeq	ILMN_251589	ILMN_251589	1700001C19RIK	NM_029296.1	NM_029296.1		75462	58037410	NM_029296.1	1700001C19Rik	NP_083572.1	ILMN_2955312	001710438	S	1330	AGACCACACTCCTGGTCTACTGAGGGGTCGTGCATGCTAGACAAGCCTAC	17	-	47549875-47549924	17qC	Mus musculus RIKEN cDNA 1700001C19 gene (1700001C19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_193107	ILMN_251589	1700001C19RIK	NM_029296.1	NM_029296.1		75462	58037410	NM_029296.1	1700001C19Rik	NP_083572.1	ILMN_1215822	004200286	S	1131	GAGGTCGTTACCTCAGACTGTAATAACCGTGAGGGCGTGGAGACATGCAG	17	-	47550074-47550123	17qC	Mus musculus RIKEN cDNA 1700001C19 gene (1700001C19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_232467	ILMN_232467	OLFR948	NM_001011756.1	NM_001011756.1		257912	58801299	NM_001011756.1	Olfr948	NP_001011756.1	ILMN_2804649	006900184	S	84	TCTCCTATTTGTAGCAATCTATCTGATCACTGTGGCAGGAAACCTGGGGA	9	-	39127064-39127113	9qA5.1	Mus musculus olfactory receptor 948 (Olfr948), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-51; MOR171-45	MOR171-51; MOR171-45
Mus musculus	RefSeq	ILMN_199439	ILMN_199439	MRGPRX1	NM_207540.1	NM_207540.1		404242	46430535	NM_207540.1	Mrgprx1	NP_997423.1	ILMN_2941546	007050273	S	1001	GGCAGCATAGAAAGCATAGGTCCCTGAAAAGAGTTCTTAAGAGGGCTCTG	7	-	47889126-47889175	7qB4	Mus musculus MAS-related GPR, member X1 (Mrgprx1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Mrgprc11; MrgC11	Mrgprc11; MrgC11
Mus musculus	RefSeq	ILMN_191467	ILMN_260221	NCAPG	XM_485604.4	XM_485604.4		54392	94374442	XM_485604.4	Ncapg	XP_485604.3	ILMN_1227776	000110537	S	3120	GAGCTGATAAGGATGAAGTCCTTTGAAGTTGTGCTTATAACTTTGCTTTA					PREDICTED: Mus musculus on-SMC condensin I complex, subunit G, transcript variant 1 (Ncapg), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_201841	ILMN_260221	NCAPG	XM_485604.4	XM_485604.4		54392	94374442	XM_485604.4	Ncapg	XP_485604.3	ILMN_1227448	000290064	S	1338	GGACACTAGTGAAGAAGGAGGAAGGAAACGACTGCTGGCTATTTTGCAAG					PREDICTED: Mus musculus on-SMC condensin I complex, subunit G, transcript variant 1 (Ncapg), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_222295	ILMN_260221	NCAPG	XM_485604.4	XM_485604.4		54392	94374442	XM_485604.4	Ncapg	XP_485604.3	ILMN_2747569	001940753	S	4621	AGGTGGATGCTAACTACCTCGAAGCAAACTGGGAAAGGCAAAGGTATCAG					PREDICTED: Mus musculus on-SMC condensin I complex, subunit G, transcript variant 1 (Ncapg), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_188717	ILMN_188717	4921504E06RIK	scl19613.10_13				34328302	NM_027600	4921504E06Rik		ILMN_2455108	002760025	S	5	CTGTTACCTACAGTGAACTGCATTGTATAGGTTGGTTCATAAGACTTTGT										
Mus musculus	RefSeq	ILMN_193116	ILMN_255437	TUBA1A	NM_011653.2	NM_011653.2		22142	133892260	NM_011653.2	Tuba1a	NP_035783.1	ILMN_2494251	002570372	S	1451	CCAACACAGAAAGTTGTGGTCTGATCAGTTAATTTGTATGTGGCAATGTG	15	-	98780368-98780417	15qF1	Mus musculus tubulin, alpha 1A (Tuba1a), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC102098; Tuba1; MGC102097; Tuba-1; MGC102099	MGC102098; Tuba1; MGC102097; Tuba-1; MGC102099
Mus musculus	RefSeq	ILMN_187988	ILMN_232010	ANKRD28	NM_001024604.2	NM_001024604.2		105522	118131111	NM_001024604.2	Ankrd28	NP_001019775.1	ILMN_1217556	004120129	S	4897	ACATTGGGGGGAGGGGTCTTACTAGAGCTGGGTAAAGTTCCATACATTGC	14	-	32513483-32513532	14qB	Mus musculus ankyrin repeat domain 28 (Ankrd28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI465466; mKIAA0379; KIAA0379; AI604979; E430019N21Rik	AI465466; mKIAA0379; KIAA0379; AI604979; E430019N21Rik
Mus musculus	RefSeq	ILMN_192849	ILMN_235720	KLHL5	NM_175174.3	NM_175174.3		71778	133892613	NM_175174.3	Klhl5	NP_780383.1	ILMN_2650574	006380373	S	1615	TATGGCAGACATTTGGAATTCATATAAATGCAAGATATATTAGAATCAAT	5	+	65544653-65544702	5qC3.1	Mus musculus kelch-like 5 (Drosophila) (Klhl5), mRNA.				1300013C10Rik	1300013C10Rik
Mus musculus	RefSeq	ILMN_212512	ILMN_212512	TEX15	NM_031374.2	NM_031374.2		104271	118722337	NM_031374.2	Tex15	NP_113551.2	ILMN_2627339	000730202	S	8341	TTTCTACGAAGGCCTTAAAAATAAATCTCTTCATACTGAAATAAATGCAA	8	+	34695990-34696007:34696008-34696039	8qA4	Mus musculus testis expressed gene 15 (Tex15), mRNA.				2210014E14Rik; AU022940; AL022622	2210014E14Rik; AU022940; AL022622
Mus musculus	RefSeq	ILMN_213572	ILMN_213572	CAPN9	NM_023709.3	NM_023709.3		73647	142352341	NM_023709.3	Capn9	NP_076198.1	ILMN_1228409	005340008	S	926	TCTGTGGACCTGGAGGAGCAGAAGCGCCTGGGCCACACTGCCCTTGATGA	8	+	127127802-127127851	8qE2	Mus musculus calpain 9 (Capn9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]	2200003B16Rik; GC36	2200003B16Rik; GC36
Mus musculus	RefSeq	ILMN_219220	ILMN_219220	NAT15	NM_029090.3	NM_029090.3		74763	134254441	NM_029090.3	Nat15	NP_083366.1	ILMN_1245322	005420450	S	220	CCCTCAGCGAGGTCAGCCTGCGCCTCCTCTGCCACGATGACATAGACACT	16	+	3894400-3894449	16qA1	Mus musculus N-acetyltransferase 15 (GCN5-related, putative) (Nat15), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	AI315146	AI315146
Mus musculus	RefSeq	ILMN_219220	ILMN_219220	NAT15	NM_029090.3	NM_029090.3		74763	134254441	NM_029090.3	Nat15	NP_083366.1	ILMN_1244030	004830288	S	2100	GGCAGTAAAGTATCCCCCTCCCTCAACAGAACTAGCCAGCAGGTAGCCAG	16	+	3904456-3904505	16qA1	Mus musculus N-acetyltransferase 15 (GCN5-related, putative) (Nat15), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	AI315146	AI315146
Mus musculus	MEEBO	ILMN_194968	ILMN_194968	PLCXD3	scl48135.4.1_204				31340686	NM_177355	Plcxd3		ILMN_2511333	004210471	S	19	CTAATTCTTGGTCGTAGAAAATATGCATCAAATCAGTCTCCCTGCATCAG							The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]		
Mus musculus	Riken	ILMN_206181	ILMN_206181	E330020K23RIK	ri|E330020K23|PX00212E07|AK087789|987					AK087789	E330020K23Rik		ILMN_2578183	003830438	S	676	GTGAGTCAGTGTACCGGATACCAGTGTCTTGTCTTGTTCCGTTCAGGTAC										
Mus musculus	RefSeq	ILMN_197994	ILMN_197994	LOC239863	XM_139707.1	XM_139707.1			20896500	XM_139707.1	LOC239863		ILMN_2530107	001500372	S	241	GACCCCCAGCTACAGCAGCTCCCACCACCTTTTCAGAGGTGCAGTTGCCC										
Mus musculus	RefSeq	ILMN_201048	ILMN_230750	PCSK6	XM_919493.2	XM_919493.2		18553	94380596	XM_919493.2	Pcsk6	XP_924586.1	ILMN_2540896	001170379	S	1377	CTGAAGGCGAGCGACTGGAAAGTCAACGGAGCTGGGCATAAAGTTAGCCA				7qC	PREDICTED: Mus musculus proprotein convertase subtilisin/kexin type 6, transcript variant 4 (Pcsk6), mRNA.		The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IGI]; The specification of the anterior/posterior axis of the embryo by products of genes expressed in the zygote; exemplified in insects by the gap genes, pair rule genes and segment polarity gene cascade [goid 7354] [evidence IMP]; The specification of the anterior/posterior axis of the embryo by products of genes expressed in the zygote; exemplified in insects by the gap genes, pair rule genes and segment polarity gene cascade [goid 7354] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200888	ILMN_230750	PCSK6	XM_919493.2	XM_919493.2		18553	94380596	XM_919493.2	Pcsk6	XP_924586.1	ILMN_2540354	002360605	S	357	AAGAGATCGACCTTGAGCAGCAGGGGCCCCCACACCTTCCTCAGAATGGA				7qC	PREDICTED: Mus musculus proprotein convertase subtilisin/kexin type 6, transcript variant 4 (Pcsk6), mRNA.		The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IGI]; The specification of the anterior/posterior axis of the embryo by products of genes expressed in the zygote; exemplified in insects by the gap genes, pair rule genes and segment polarity gene cascade [goid 7354] [evidence IMP]; The specification of the anterior/posterior axis of the embryo by products of genes expressed in the zygote; exemplified in insects by the gap genes, pair rule genes and segment polarity gene cascade [goid 7354] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213443	ILMN_230750	PCSK6	XM_919493.2	XM_919493.2		18553	94380596	XM_919493.2	Pcsk6	XP_924586.1	ILMN_2637094	001780255	S	3860	GTGGATGCTGCGCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGG				7qC	PREDICTED: Mus musculus proprotein convertase subtilisin/kexin type 6, transcript variant 4 (Pcsk6), mRNA.		The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IGI]; The specification of the anterior/posterior axis of the embryo by products of genes expressed in the zygote; exemplified in insects by the gap genes, pair rule genes and segment polarity gene cascade [goid 7354] [evidence IMP]; The specification of the anterior/posterior axis of the embryo by products of genes expressed in the zygote; exemplified in insects by the gap genes, pair rule genes and segment polarity gene cascade [goid 7354] [evidence IGI]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186436	ILMN_186436	TRIM23	NM_030731.1	NM_030731.1		81003	29789262	NM_030731.1	Trim23	NP_109656.1	ILMN_2879225	006520639	S	4051	AGGATTGCTTTACTTCCACATTTAGCATAACATCCTTAGTGCTGGGGTCC	13	+	105322223-105322272	13qD1	Mus musculus tripartite motif protein 23 (Trim23), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6330516O20Rik; Arfd1; AI450195	6330516O20Rik; Arfd1; AI450195
Mus musculus	RefSeq	ILMN_186436	ILMN_186436	TRIM23	NM_030731.1	NM_030731.1		81003	29789262	NM_030731.1	Trim23	NP_109656.1	ILMN_2879221	004180068	S	3947	CAGCCAGTGGAGTGCCTAACAGAGCTTAAGGAAGTATGGCTTTACCCCAC	13	+	105322119-105322168	13qD1	Mus musculus tripartite motif protein 23 (Trim23), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6330516O20Rik; Arfd1; AI450195	6330516O20Rik; Arfd1; AI450195
Mus musculus	RefSeq	ILMN_221932	ILMN_221932	ELMOD3	NM_144917.4	NM_144917.4		232089	146149114	NM_144917.4	Elmod3	NP_659166.1	ILMN_2742244	004640369	S	785	CAACGCATGGCCGAGTGCTCCAGACCATCTACAAGAAGCTGACTGGCTCC				6qC1	Mus musculus ELMO/CED-12 domain containing 3 (Elmod3), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]		ELMOD3; C330008I15Rik; MGC27575; RBM29; AI844780	ELMOD3; C330008I15Rik; MGC27575; RBM29; AI844780
Mus musculus	RefSeq	ILMN_221932	ILMN_221932	ELMOD3	NM_144917.4	NM_144917.4		232089	146149114	NM_144917.4	Elmod3	NP_659166.1	ILMN_2748742	004920164	S	1439	GACCAGGACAGGCTGGGTCGCTGGGGCTCTCTGAACTAAAGAATCATGTC				6qC1	Mus musculus ELMO/CED-12 domain containing 3 (Elmod3), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]		ELMOD3; C330008I15Rik; MGC27575; RBM29; AI844780	ELMOD3; C330008I15Rik; MGC27575; RBM29; AI844780
Mus musculus	RefSeq	ILMN_190845	ILMN_190845	VPS18	NM_172269.2	NM_172269.2		228545	31542060	NM_172269.2	Vps18	NP_758473.2	ILMN_2473755	000430747	S	3782	CCCAAGAAAGGATGGAATGCCACAAGAAGGCTGCCTGCACCAAGTGTGGA	2	+	119123932-119123981	2qE5	Mus musculus vacuolar protein sorting 18 (yeast) (Vps18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	MGC36479; 9930024E13Rik	MGC36479; 9930024E13Rik
Mus musculus	MEEBO	ILMN_222449	ILMN_222449	1810049O03RIK	scl34115.4.1_20	XM_146206.3			38089052	XM_146206.3	1810049O03Rik		ILMN_2749728	000020669	S	465	AGACCTCCAGCAGTATAGCTTTATCAACCAGCTCTGCTATGAGACTGCCC										
Mus musculus	RefSeq	ILMN_210332	ILMN_210332	PRLR	NM_011169.4	NM_011169.4		19116	142379167	NM_011169.4	Prlr	NP_035299.3	ILMN_2617005	005560722	S	2116	GGATTACCTGGATCCTACGTGCTTCATGCACTCCTTTCACTGAGAGCTAG	15	+	10258980-10259022:10259023-10259029	15qA1	Mus musculus prolactin receptor (Prlr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]; Any process that modulates the frequency, rate or extent of epithelial cell differentiation [goid 30856] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with prolactin to initiate a change in cell activity [goid 4925] [evidence IMP]; Combining with prolactin to initiate a change in cell activity [goid 4925] [evidence IDA]	Pr-3; Prlr-rs1; AI987712; Pr-1	Pr-3; Prlr-rs1; AI987712; Pr-1
Mus musculus	RefSeq	ILMN_210332	ILMN_210332	PRLR	NM_011169.4	NM_011169.4		19116	142379167	NM_011169.4	Prlr	NP_035299.3	ILMN_1242620	001300735	S	777	CTACCATAACTGATGTAAAAACTGGTTGGTTTACAATGGAATATGAAATT	15	+	10252228-10252277	15qA1	Mus musculus prolactin receptor (Prlr), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IMP]; Any process that modulates the frequency, rate or extent of epithelial cell differentiation [goid 30856] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with prolactin to initiate a change in cell activity [goid 4925] [evidence IMP]; Combining with prolactin to initiate a change in cell activity [goid 4925] [evidence IDA]	Pr-3; Prlr-rs1; AI987712; Pr-1	Pr-3; Prlr-rs1; AI987712; Pr-1
Mus musculus	RefSeq	ILMN_220325	ILMN_318112	LOC100044133	XM_001478434.1	XM_001478434.1		100044133	149271982	XM_001478434.1	LOC100044133	XP_001478484.1	ILMN_1214000	004890370	S	2373	GTGCTTCTGCACTCTGCTAGAGTTTGCTGTGCTCAACTTCCTGACCTACA	X	-	69501004-69501053		PREDICTED: Mus musculus similar to gamma-aminobutyric acid (GABA-A) receptor, subunit epsilon (LOC100044133), mRNA.					
Mus musculus	RefSeq	ILMN_187117	ILMN_328288	ANKRD41	XM_001478396.1	XM_001478396.1		234396	149258851	XM_001478396.1	Ankrd41	XP_001478446.1	ILMN_2723305	007610129	S	1776	GTATTTCTTAATCAAGCTGAGTGAACATTGGGATACATGGTGCTTCTGGA				8qB3.3	PREDICTED: Mus musculus ankyrin repeat domain 41, transcript variant 1 (Ankrd41), mRNA.					
Mus musculus	RefSeq	ILMN_228009	ILMN_228009	OLFR415	NM_146714.1	NM_146714.1		258709	22129412	NM_146714.1	Olfr415	NP_666925.1	ILMN_2846636	002650138	S	243	GGATCTACTGGACAAAGACAACCGCATTTCAGACATAGGCTGTGGCTTGC	1	+	176321444-176321493	1qH3	Mus musculus olfactory receptor 415 (Olfr415), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-7	MOR267-7
Mus musculus	RefSeq	ILMN_200212	ILMN_200212	LOC385953	XM_359011.1	XM_359011.1			38080955	XM_359011.1	LOC385953		ILMN_2537964	000780685	S	451	TATGCAGTGTGTGCCGTCGTCTGGATCATCTCATGCGTCCTGGGGTTACC										
Mus musculus	Riken	ILMN_202608	ILMN_202608	9430002A10RIK	ri|9430002A10|PX00107D04|AK020399|536					AK020399	9430002A10Rik		ILMN_2550908	000610504	S	401	GACAGTGGTGCTGAGGGTGATTTGAACTGTAGGGGCCTGGTCCGTGAGGT										
Mus musculus	RefSeq	ILMN_208974	ILMN_208974	BC021614	NM_144869.2	NM_144869.2		225884	118130056	NM_144869.2	BC021614	NP_659118.1	ILMN_2591342	004290072	S	519	TGAATGACTTTCCCCTGTTCTCCGCCTATGTGGCGCGCCTCAAATCCCGA	19	-	4057601-4057650	19qA	Mus musculus cDNA sequence BC021614 (BC021614), mRNA.				MGC37914	MGC37914
Mus musculus	RefSeq	ILMN_220168	ILMN_220168	RNF215	NM_027859.2	NM_027859.2		71673	114145520	NM_027859.2	Rnf215	NP_082135.2	ILMN_2718462	004810279	S	1165	GAGACTGTGTGGACCCCTGGCTGATGCTACAACAGACCTGCCCACTGTGC	11	+	4040338-4040387	11qA1	Mus musculus ring finger protein 215 (Rnf215), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-453B22.2; MGC144709; MGC144708; AW557025; C77903; MGC106323; 0610009J22Rik	RP23-453B22.2; MGC144709; MGC144708; AW557025; C77903; MGC106323; 0610009J22Rik
Mus musculus	RefSeq	ILMN_235226	ILMN_235226	STK36	NM_175031.3	NM_175031.3		269209	67846120	NM_175031.3	Stk36	NP_778196.2	ILMN_2989871	005810471	S	5126	ATCAGTGCTTGCTCCTAGGTATGGGGTGCTCGGGTTCAGTCCCCAGCTGA	1	+	74683359-74683408	1qC3	Mus musculus serine/threonine kinase 36 (fused homolog, Drosophila) (Stk36), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MGC58023; FU; KIAA1278; mKIAA1278; Fused; B930045J24; 1700112N14Rik	MGC58023; FU; KIAA1278; mKIAA1278; Fused; B930045J24; 1700112N14Rik
Mus musculus	RefSeq	ILMN_196259	ILMN_240872	MATN3	NM_010770.2	NM_010770.2		17182	48976068	NM_010770.2	Matn3	NP_034900.2	ILMN_1236096	003310035	S	1708	CTATGACTGTGAAATCATTAATAAGATAGAGAGTGAAAAGTTTAAGGTTT	12	+	8977595-8977644	12qA1.1	Mus musculus matrilin 3 (Matn3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]			AV009181	AV009181
Mus musculus	RefSeq	ILMN_198056	ILMN_198056	LOC278265	XM_204457.2	XM_204457.2			38081115	XM_204457.2	LOC278265		ILMN_2530334	002650639	S	129	TGTGCTCTGTGAGGGGAATTGCAACCCCACAGGAAGAACAACATCAGCTG										
Mus musculus	MEEBO	ILMN_219191	ILMN_219191	D930021N14	scl24542.3.1_278				51709065	XM_489037	D930021N14		ILMN_1257369	006580189	S	2157	GGGACAAAGTGAGCTCTCTGAACATCTTCAGCTTACAGCTTCACCGTGGC										
Mus musculus	RefSeq	ILMN_193453	ILMN_193453	ZKSCAN14	NM_023322.2	NM_023322.2		67235	114158684	NM_023322.2	Zkscan14	NP_075811.2	ILMN_2497349	003360022	S	1756	CAAAATTCAGTCTCCTAGCTTCCATGTGTCTCTGCGTGACTCACGTGGCT	5	-	145955990-145956022:145956023-145956039	5qG2	Mus musculus zinc finger with KRAB and SCAN domains 14 (Zkscan14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	2310046C23Rik; MGC117641; 2810437E14Rik; Zfp99	2310046C23Rik; MGC117641; 2810437E14Rik; Zfp99
Mus musculus	RefSeq	ILMN_190917	ILMN_228452	PCGF3	NM_172716.4	NM_172716.4		69587	146198689	NM_172716.4	Pcgf3	NP_766304.2	ILMN_2673601	001110564	S	3341	CCAGCCTCCCAGCACGTGGTCTCGCTCAACACCATTTTCACAAAAATAGA				5qF	Mus musculus polycomb group ring finger 3 (Pcgf3), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI662857; E430039C14; Rnf3; D630042K08Rik; RNF3A; 2310035N15Rik; DONG1	AI662857; E430039C14; Rnf3; D630042K08Rik; RNF3A; 2310035N15Rik; DONG1
Mus musculus	RefSeq	ILMN_219704	ILMN_230610	FAR1	NM_026143.2	NM_026143.2		67420	74096447	NM_026143.2	Far1	NP_080419.2	ILMN_2712393	006520072	S	1643	CTTGTGATACTTATCTGGCGCATTTTTATTGCAAGATCACAAATGGCAAG	7	+	120711643-120711692	7qF1	Mus musculus fatty acyl CoA reductase 1 (Far1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of wax, which includes C16 and C18 fatty acids [goid 10025] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a long-chain aldehyde + CoA + NADP+ = a long-chain acyl-CoA + NADPH [goid 50062] [evidence IDA]	FAR1; 2600011M19Rik; 3732409C05Rik	FAR1; 2600011M19Rik; 3732409C05Rik
Mus musculus	RefSeq	ILMN_188063	ILMN_312711	LOC100045617	XM_001474613.1	XM_001474613.1		100045617	149266912	XM_001474613.1	LOC100045617	XP_001474663.1	ILMN_2613641	006200376	S	1191	CATCATGAGGGAATTCCGATCAGGGTCAAGCCGTGTTCTGATCACTACTG					PREDICTED: Mus musculus similar to Eukaryotic translation initiation factor 4A2 (LOC100045617), mRNA.					
Mus musculus	Riken	ILMN_207430	ILMN_207430	4921538I05RIK	ri|4921538I05|PX00639E09|AK076620|2235					AK076620	4921538I05Rik		ILMN_1248344	002850465	S	1927	GAGACTCTTGTGTAGCCACCTCACGGATTCCACTCCTCACGGCCAAGGAC										
Mus musculus	RefSeq	ILMN_188003	ILMN_230306	FGFR2	NM_010207.2	NM_010207.2		14183	116089348	NM_010207.2	Fgfr2	NP_034337.2	ILMN_1229167	007380477	S	1613	CTGGAGATGATGAGGACGACACAGATAGCTCCGAAGACGTTGTCAGTGAG	7	-	137384729-137384778	7qF3	Mus musculus fibroblast growth factor receptor 2 (Fgfr2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [evidence IGI]; The process whereby a relatively unspecialized cell acquires specialized features of a mesenchymal cell [goid 48762] [evidence IGI]; Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48562] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IGI]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence IMP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IGI]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IMP]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IDA]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IGI]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IMP]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]	Fgfr-7; Bek; KGFRTr; AW556123; MGC102519; svs; Fgfr7; Fgfr-2; AU043015	Fgfr-7; Bek; KGFRTr; AW556123; MGC102519; svs; Fgfr7; Fgfr-2; AU043015
Mus musculus	Riken	ILMN_205369	ILMN_205369	D130012J16RIK	ri|D130012J16|PX00182K18|AK051186|1345					AK051186	D130012J16Rik		ILMN_1245829	001050070	S	918	GACTCAGGTCTTAGGCTGGTCTGTCCCACAATCCCTCAGGCAGCAGGACA										
Mus musculus	RefSeq	ILMN_214759	ILMN_214759	PROM2	NM_178047.3	NM_178047.3		192212	142349738	NM_178047.3	Prom2	NP_835148.1	ILMN_1247357	000630619	S	4608	GCCAACATTTCACATTCCTAGGGTGAAGCCCACCCCAAAAGCATGGGTAA	2	-	127352277-127352326	2qF1	Mus musculus prominin 2 (Prom2), transcript variant 2, mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]			AI507243; MGC31164; Prom-rp	AI507243; MGC31164; Prom-rp
Mus musculus	RefSeq	ILMN_214759	ILMN_214759	PROM2	NM_178047.3	NM_178047.3		192212	142349738	NM_178047.3	Prom2	NP_835148.1	ILMN_1246392	007160228	S	3912	GTGAAGAGGGTGAGTGCCCTTTATGGTGGTAATTCTCCCTATCTCTGGGC	2	-	127352973-127353022	2qF1	Mus musculus prominin 2 (Prom2), transcript variant 2, mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]			AI507243; MGC31164; Prom-rp	AI507243; MGC31164; Prom-rp
Mus musculus	RefSeq	ILMN_189650	ILMN_248962	ZFP462	NM_172867.3	NM_172867.3		242466	125660454	NM_172867.3	Zfp462	NP_766455.2	ILMN_2515893	001570356	S	8207	GTTTTTCTAGTTTTAATACCTTAAGCTTTTTCAAGACCTAACTGCAGCCG	4	+	55094146-55094195	4qB3	Mus musculus zinc finger protein 462 (Zfp462), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43392] [evidence IDA]		Gt4-2; 9430078C22Rik; Zfpip; 6030417H05	Gt4-2; 9430078C22Rik; Zfpip; 6030417H05
Mus musculus	RefSeq	ILMN_199359	ILMN_199359	LOC386419	XM_359219.1	XM_359219.1			38081568	XM_359219.1	LOC386419		ILMN_1260386	001400647	S	445	GAGATGGAAGAGAGAATCTCAGTCAGAATGGCTAAGATCAAAAACTCAGG										
Mus musculus	RefSeq	ILMN_211424	ILMN_211424	HEPACAM	NM_175189.4	NM_175189.4		72927	75992944	NM_175189.4	Hepacam	NP_780398.2	ILMN_2615762	001450168	S	1184	TGCCACTGGCCGGACGCACACGTCGCCACCGCGGGCCCCGAGCTCGCCAG	9	+	37192252-37192301	9qA4	Mus musculus hepatocyte cell adhesion molecule (Hepacam), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Hepn1; 2900042E01Rik	Hepn1; 2900042E01Rik
Mus musculus	Riken	ILMN_204892	ILMN_204892	TAF1A	ri|A530022L03|PX00140J09|AK040747|1335					AK040747	Taf1a		ILMN_2568415	001260402	S	1030	GATTGTGGGTGTGGTAATGGGGGGAACTTTCAATCACCTAATCTCAGGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase I (Pol I), originating at a Pol I-specific promoter [goid 6360] [evidence TAS]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase I transcription [goid 3701] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209661	ILMN_209661	4733401H21RIK	NM_027568.2	NM_027568.2		70831	141803049	NM_027568.2	4733401H21Rik	NP_081844.1	ILMN_2597968	003780634	S	705	GGATCTTGTACCATCTTCATGTGTGACTGGCATGAAGATCTGATATCAGC	11	+	99769938-99769987	11qD	Mus musculus RIKEN cDNA 4733401H21 gene (4733401H21Rik), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			AI506529	AI506529
Mus musculus	RefSeq	ILMN_214446	ILMN_311416	3222402P14RIK	XM_001475836.1	XM_001475836.1		235542	149260298	XM_001475836.1	3222402P14Rik	XP_001475886.1	ILMN_2648104	004200431	S	1708	GGAGGTAAACGATCCTGGAACTCTAAAACCTGTGCAGCTTCAGTCACCGT	9	-	101114269-101114318	9qE4	PREDICTED: Mus musculus RIKEN cDNA 3222402P14 gene (3222402P14Rik), mRNA.					
Mus musculus	Riken	ILMN_203451	ILMN_203451	E430014N10RIK	ri|E430014N10|PX00098H02|AK088400|2965					AK088400	E430014N10Rik		ILMN_1240823	005960138	S	2590	CAGAAAAGAACACAAACTCAAGTTTATCCCAATGCCAGTTTTGTACGGTG										
Mus musculus	RefSeq	ILMN_218165	ILMN_218165	PIAS4	NM_021501.3	NM_021501.3		59004	142378150	NM_021501.3	Pias4	NP_067476.2	ILMN_2692454	002480451	S	1269	TTGAGTTCCTGGCGGAAGGCTCATGGCGTCCAATCCGTGCAGAGAAGGAG	10	-	80617229-80617278	10qC1	Mus musculus protein inhibitor of activated STAT 4 (Pias4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IDA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence ISA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Pias-gamma; Piasg; PIASY	Pias-gamma; Piasg; PIASY
Mus musculus	RefSeq	ILMN_199203	ILMN_199203	LOC268473	XM_196060.1	XM_196060.1			25072210	XM_196060.1	LOC268473		ILMN_2534412	002680274	S	268	ATGGGCAAGACAAGGAAGGATGCCAGGGGTGGGCAGACTCGGGAAGGCAA										
Mus musculus	RefSeq	ILMN_216658	ILMN_253339	BC048943	XM_902085.2	XM_902085.2		217874	94393097	XM_902085.2	BC048943	XP_907178.1	ILMN_2673745	001340438	S	999	CCACCTCAGAGTCACCCTTAGCACTGAGAACAAACAGTGGCATGACTCCA	12	-	113217597-113217646	12qF1	PREDICTED: Mus musculus cDNA sequence BC048943, transcript variant 2 (BC048943), mRNA.					
Mus musculus	MEEBO	ILMN_216850	ILMN_216850	CBS	scl0001670.1_34	NM_144855.1			21450070	NM_144855.1	Cbs		ILMN_1230318	006380707	S	2005	GAATCCTCTATGCCCGAGTAGCTTACAGGGCCTTTCCTCTGGTGTCACAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine [goid 6535] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cysteine, via the intermediate cystathionine [goid 19343] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of JUN kinase activity [goid 43506] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cysteine, 2-amino-3-mercaptopropanoic acid [goid 19344] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: L-serine + L-homocysteine = cystathionine + H2O [goid 4122] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186309	ILMN_186309	PMEPA1	NM_022995.3	NM_022995.3		65112	119508427	NM_022995.3	Pmepa1	NP_075371.2	ILMN_2987404	003840671	S	3639	TTGTCAAAGGCAGGGTGTCCTGAGTGTCAGGCTGTCAGTCCCTGCAGGCT	2	-	173050808-173050857	2qH3	Mus musculus prostate transmembrane protein, androgen induced 1 (Pmepa1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2210418I02Rik; Erg1.2; AW455466; Stag1; Pmepa1; N4wbp4	2210418I02Rik; Erg1.2; AW455466; Stag1; Pmepa1; N4wbp4
Mus musculus	RefSeq	ILMN_186309	ILMN_186309	PMEPA1	NM_022995.3	NM_022995.3		65112	119508427	NM_022995.3	Pmepa1	NP_075371.2	ILMN_1213989	003420544	S	4220	GCGAGATGTGTTCTCATCTGTGCTCTGGACTTGAGAGCCCGAAATGCCAC	2	-	173050227-173050276	2qH3	Mus musculus prostate transmembrane protein, androgen induced 1 (Pmepa1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2210418I02Rik; Erg1.2; AW455466; Stag1; Pmepa1; N4wbp4	2210418I02Rik; Erg1.2; AW455466; Stag1; Pmepa1; N4wbp4
Mus musculus	RefSeq	ILMN_209156	ILMN_209156	TTLL3	NM_133923.3	NM_133923.3		101100	66793426	NM_133923.3	Ttll3	NP_598684.3	ILMN_2885900	003450541	S	2375	GGGCTGAGGCATACCCCAAGAAGAGGCTGAGCCTCCCTAATCCCTTCACT	6	+	113380197-113380246	6qE3	Mus musculus tubulin tyrosine ligase-like family, member 3 (Ttll3), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	4833441J24Rik; AI450050	4833441J24Rik; AI450050
Mus musculus	MEEBO	ILMN_222455	ILMN_222455	6620401M08RIK	scl31310.11_188				51746813	XM_489178	6620401M08Rik		ILMN_2749791	004590152	S	2904	CTGGGGTTGATAACGGAAAGGGAAACAATGGCTGCCTGGAGAAGGCATGT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]				
Mus musculus	RefSeq	ILMN_218044	ILMN_218044	CDC7	NM_009863.2	NM_009863.2		12545	126032302	NM_009863.2	Cdc7	NP_033993.2	ILMN_1255981	007380088	S	1007	CTGTCCAGCGCTCTGTTTTTGGAGAGAGAAATTTCAATATACACAGCTCC	5	+	107403639-107403688	5qE5	Mus musculus cell division cycle 7 (S. cerevisiae) (Cdc7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	muCdc7; AI597260; Cdc7l1; MGC91067	muCdc7; AI597260; Cdc7l1; MGC91067
Mus musculus	RefSeq	ILMN_218044	ILMN_218044	CDC7	NM_009863.2	NM_009863.2		12545	126032302	NM_009863.2	Cdc7	NP_033993.2	ILMN_1238374	000110259	S	2746	GCTGAGGAGTTCCTGCTTGTATCATCACAGACTAGGGAGCTGTCTCTCAG	5	+	107413236-107413285	5qE5	Mus musculus cell division cycle 7 (S. cerevisiae) (Cdc7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	muCdc7; AI597260; Cdc7l1; MGC91067	muCdc7; AI597260; Cdc7l1; MGC91067
Mus musculus	RefSeq	ILMN_191246	ILMN_257643	GSK3B	NM_019827.5	NM_019827.5		56637	146135084	NM_019827.5	Gsk3b	NP_062801.1	ILMN_2593888	003830246	S	2648	CATCCTTATCCCTCCACATGCTCGGATTCAGGCCGCTGCTTCACCGCCTG				16qB3	Mus musculus glycogen synthase kinase 3 beta (Gsk3b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43227] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence ISO]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISO]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm [goid 46827] [evidence ISO]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence ISO]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISO]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; The resumption of the mitotic cell division cycle by cells that were in a quiescent or other non-dividing state [goid 320] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISO]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 4696] [evidence ISO]; Interacting selectively with one of the p53 family of proteins [goid 2039] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IPI];  [goid 4696] [evidence ISS];  [goid 4696] [evidence IDA]; Catalysis of the reaction: ATP + tau-protein = ADP + O-phospho-tau-protein [goid 50321] [evidence IDA]	GSK3; 7330414F15Rik; C86142; GSK-3beta; GSK-3; 8430431H08Rik	GSK3; 7330414F15Rik; C86142; GSK-3beta; GSK-3; 8430431H08Rik
Mus musculus	MEEBO	ILMN_223588	ILMN_223588	4933417A18RIK	scl44915.6.1_3	NM_025750.1			13385215	NM_025750.1	4933417A18Rik		ILMN_2766149	006280164	S	1112	TGGAGTCAAGCAACAGAAAACATTTGAAGACAAACAAACAAATACATCTG										
Mus musculus	RefSeq	ILMN_189378	ILMN_189378	WDR21	NM_030246.1	NM_030246.1		73828	21313611	NM_030246.1	Wdr21	NP_084522.1	ILMN_2460745	002070368	S	1628	AAATGGTGCTTGCTGTATGCAAGTGGAGTCCTTCAGCCTCGGAGGGCAGA	12	+	84882576-84882577:84882578-84882625	12qD1	Mus musculus WD repeat domain 21 (Wdr21), mRNA.				1110018E21Rik	1110018E21Rik
Mus musculus	RefSeq	ILMN_217776	ILMN_217776	TLE6	NM_053254.2	NM_053254.2		114606	118131148	NM_053254.2	Tle6	NP_444484.1	ILMN_2900617	000780445	S	1899	CCTCCCCTAACTGCACAGTGGTGGATGGCAATGGGTGTGATGGGTCTGCA	10	-	81053716-81053765	10qC1	Mus musculus transducin-like enhancer of split 6, homolog of Drosophila E(spl) (Tle6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		Grg6; 1810057E06Rik	Grg6; 1810057E06Rik
Mus musculus	RefSeq	ILMN_191987	ILMN_251559	4930444G20RIK	XM_125511.6	XM_125511.6		114671	94388003	XM_125511.6	4930444G20Rik	XP_125511.5	ILMN_2483965	002120010	S	1704	CTGCTGCTGACAAACCAAAAGGAGACCACGTGTTTTAGAAATCCTGTTTC	10	-	21786132-21786181	10qA3	PREDICTED: Mus musculus RIKEN cDNA 4930444G20 gene (4930444G20Rik), mRNA.					
Mus musculus	Riken	ILMN_203086	ILMN_203086	A430093B03RIK	ri|A430093B03|PX00139G12|AK040425|806					AK040425	A430093B03Rik		ILMN_1256382	002850743	S	754	AGGTCCAGGAATGTTTATGGTGGAGTCAAGATGAACCTCGGGTGGAAGTC										
Mus musculus	RefSeq	ILMN_220334	ILMN_220334	TMED9	NM_026211.3	NM_026211.3		67511	145966910	NM_026211.3	Tmed9	NP_080487.2	ILMN_2720740	004390347	S	477	CGAACATGCAAACGACTATGCAGAAATTGCTGCCAAGGACAAGCTGAGCG				13qB1	Mus musculus transmembrane emp24 protein transport domain containing 9 (Tmed9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		2400003B06Rik	2400003B06Rik
Mus musculus	RefSeq	ILMN_211974	ILMN_211974	KEAP1	NM_016679.3	NM_016679.3		50868	142387056	NM_016679.3	Keap1	NP_057888.1	ILMN_2707771	003780731	S	2755	ATGAGGCATCACCGTAGTGCGCTGGGGATTACTGTGCACCAGGGCAAGAT	9	-	21035701-21035750	9qA3	Mus musculus kelch-like ECH-associated protein 1 (Keap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IPI]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that modulates the frequency, rate or extent of epidermal cell differentiation [goid 45604] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]	INRF2; mKIAA0132	INRF2; mKIAA0132
Mus musculus	RefSeq	ILMN_211974	ILMN_211974	KEAP1	NM_016679.3	NM_016679.3		50868	142387056	NM_016679.3	Keap1	NP_057888.1	ILMN_2621346	003360048	S	2528	CAGTGGGGGGCTTTGACGGGACTAACCGGCTTAACTCCGCAGAATGTTAC	9	-	21036198-21036247	9qA3	Mus musculus kelch-like ECH-associated protein 1 (Keap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IPI]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that modulates the frequency, rate or extent of epidermal cell differentiation [goid 45604] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]	INRF2; mKIAA0132	INRF2; mKIAA0132
Mus musculus	RefSeq	ILMN_211974	ILMN_211974	KEAP1	NM_016679.3	NM_016679.3		50868	142387056	NM_016679.3	Keap1	NP_057888.1	ILMN_1258406	003190021	S	3534	GTCTTCAGAGGGCGGTCGGAATCCCTCAGGGAGAGACAGCTCTTCTATTG	9	-	21034541-21034590	9qA3	Mus musculus kelch-like ECH-associated protein 1 (Keap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IPI]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IMP]; Any process that modulates the frequency, rate or extent of epidermal cell differentiation [goid 45604] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IMP]	INRF2; mKIAA0132	INRF2; mKIAA0132
Mus musculus	RefSeq	ILMN_220230	ILMN_220230	OLFR164	NM_146451.1	NM_146451.1		258443	33238893	NM_146451.1	Olfr164	NP_666662.1	ILMN_2839732	000290170	S	725	CCACCTGTTCCTCTCACCTCATGGTGGTGGGAATGTACTATGGGGCAGCC	16	-	19286060-19286109	16qA3	Mus musculus olfactory receptor 164 (Olfr164), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR279-2	MOR279-2
Mus musculus	Riken	ILMN_203967	ILMN_203967	A530021N07RIK	ri|A530021N07|PX00140F05|AK040737|1839					AK040737	A530021N07Rik		ILMN_1244617	005490010	S	1761	TGCTGACATCATCTTCTGACCTCTCTGGGCACCAGCACACATGGAGTGTT										
Mus musculus	Riken	ILMN_203623	ILMN_203623	B830007H12RIK	ri|B830007H12|PX00072N17|AK046786|2640					AK046786	B830007H12Rik		ILMN_1244686	007510482	S	2412	ACCTGGCCACCACCACCTGGCTAGGATTACTATTCCTGTGATGATACACC										
Mus musculus	RefSeq	ILMN_218728	ILMN_218728	ABTB1	NM_030251.2	NM_030251.2		80283	142365947	NM_030251.2	Abtb1	NP_084527.1	ILMN_2699477	002650228	S	1759	CCGCATACAGGGCTGGACAGGACGTAGGGGGTGTGTGGCAATAAAGCTTG	6	-	88785922-88785971	6qD1	Mus musculus ankyrin repeat and BTB (POZ) domain containing 1 (Abtb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BPOZ; MGC7237; BC003234; AI847549; EF1ABP	BPOZ; MGC7237; BC003234; AI847549; EF1ABP
Mus musculus	RefSeq	ILMN_220760	ILMN_220760	EN2	NM_010134.3	NM_010134.3		13799	142385154	NM_010134.3	En2	NP_034264.1	ILMN_2726471	006940544	S	3230	CTGCGCCAACACTTTCTCTTTGTACATATTCGTGCCAACCTTCTGAAAAG	5	+	28498399-28498448	5qB1	Mus musculus engrailed 2 (En2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IGI]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IGI]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IGI]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IGI]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	En-2; BB131122	En-2; BB131122
Mus musculus	MEEBO	ILMN_214148	ILMN_214148	C130085G02RIK	scl0240892.1_60	XM_136364.4			38073973	XM_136364.4	C130085G02Rik		ILMN_2644809	001990138	S	3324	GACTTCGCTGAGTTTGGGGCCAAGAGGAAATTCACCCAGAGCTTCATGAG										
Mus musculus	RefSeq	ILMN_218094	ILMN_234981	HYI	NM_026601.1	NM_026601.1		68180	55742867	NM_026601.1	Hyi	NP_080877.1	ILMN_2691567	004830576	S	728	CTGCTAGAAGATGAGGGCTACCAAGGATTTGTGGGTTGCGAGTATCGGCC	4	+	118035076-118035102:118035189-118035211	4qD2.1	Mus musculus hydroxypyruvate isomerase homolog (E. coli) (Hyi), mRNA.			Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: hydroxypyruvate = 2-hydroxy-3-oxopropanoate [goid 8903] [evidence IEA]	6430559E15Rik; HT036; 2700033B16Rik	6430559E15Rik; HT036; 2700033B16Rik
Mus musculus	RefSeq	ILMN_200859	ILMN_200859	LOC384604	XM_357738.1	XM_357738.1			38086634	XM_357738.1	LOC384604		ILMN_2540256	004810397	S	3	GGTCACTCAGAGCTGCCAGTGGCGATCAACAGCCACAGTGGACAAGGTGA										
Mus musculus	MEEBO	ILMN_214552	ILMN_214552	A930104D05RIK	scl18824.4.1_86	NM_177202.2			31343057	NM_177202.2	A930104D05Rik		ILMN_1214366	004730341	S	804	AAGCCCATTCTTCCGCTTGTACCCGCCGGAGCGCTGATGATCATTATCAT										
Mus musculus	RefSeq	ILMN_192050	ILMN_192050	VEGFA	NM_009505.3	NM_009505.3		22339	118130279	NM_009505.3	Vegfa	NP_033531.2	ILMN_2484527	005860358	S	2696	CATCACGTCTTTGTCTCTAGAGCAGTTTTCCGAGATATTCCGTAGTACAT	17	-	46154028-46154077	17qC	Mus musculus vascular endothelial growth factor A (Vegfa), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IGI]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IGI]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; Any process involved in the maintenance of an equilibrium of the surface-active lipoprotein mixture which coats the alveoli [goid 43129] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IDA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence IDA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	VEGF120; VPF; VEGF-A; Vegf	VEGF120; VPF; VEGF-A; Vegf
Mus musculus	RefSeq	ILMN_194363	ILMN_260790	MOCS3	XM_911841.2	XM_911841.2		69372	94367633	XM_911841.2	Mocs3	XP_916934.1	ILMN_1219621	005890438	S	1200	GGAAGCAGGAGTCGCAGGAAGGGGTTGCTCTCCCGGTGTATGTGATTTGC				2qH3	PREDICTED: Mus musculus molybdenum cofactor synthesis 3 (Mocs3), mRNA.		The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_194363	ILMN_260790	MOCS3	XM_911841.2	XM_911841.2		69372	94367633	XM_911841.2	Mocs3	XP_916934.1	ILMN_2776717	007000681	S	1354	GGCCTGGGCCGCCAAAATTGATGGGACATTTCCACAGTACTGAGAGGACA				2qH3	PREDICTED: Mus musculus molybdenum cofactor synthesis 3 (Mocs3), mRNA.		The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211854	ILMN_211854	ELOF1	NM_170777.3	NM_170777.3		66126	40254323	NM_170777.3	Elof1	NP_740747.1	ILMN_1231371	005690575	S	913	TACTGGCCACCCAGGTCCCCTGGCTGGGCTCGGCTGGGGAACACCATTTT	9	-	21917523-21917572	9qA3	Mus musculus elongation factor 1 homolog (ELF1, S. cerevisiae) (Elof1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1110011K10Rik	1110011K10Rik
Mus musculus	Riken	ILMN_203782	ILMN_203782	A230052E09RIK	ri|A230052E09|PX00128M05|AK038644|3915					AK038644	A230052E09Rik		ILMN_1228879	005910576	S	3660	GTTATGCTCAGGGTACTGCAGGGACAGAGGAAAGAGGCACCCACTTCTGG										
Mus musculus	RefSeq	ILMN_216537	ILMN_216537	MED8	NM_020000.2	NM_020000.2		80509	114155154	NM_020000.2	Med8	NP_064384.2	ILMN_2672208	006770681	S	685	TTGCAGGGGCCTCAGGATTACCGCAGGTTCAGATGCCAGGTGCTCCAAAC	4	+	118086379-118086428	4qD2.1	Mus musculus mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) (Med8), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MNCb-2386; AB041805; 2210021A15Rik; ARC32	MNCb-2386; AB041805; 2210021A15Rik; ARC32
Mus musculus	RefSeq	ILMN_218448	ILMN_216537	MED8	NM_020000.2	NM_020000.2		80509	114155154	NM_020000.2	Med8	NP_064384.2	ILMN_1222516	005720682	S	869	CACTCTCAGGTGATCTGTGCTGAGTTGAGCAATGACATGATTTTTTGCTC	4	+	118087411-118087460	4qD2.1	Mus musculus mediator of RNA polymerase II transcription, subunit 8 homolog (yeast) (Med8), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence ISA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		MNCb-2386; AB041805; 2210021A15Rik; ARC32	MNCb-2386; AB041805; 2210021A15Rik; ARC32
Mus musculus	MEEBO	ILMN_186013	ILMN_186013	FBXO30	scl39152.4_674				38090936	XM_125493	Fbxo30		ILMN_2431871	000050152	S	3	GTATGCGATCAGGTGTTTGGATGGCAAACCTGGGATGTTGCATGAGTACT							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223431	ILMN_223431	AHSG	NM_013465.1	NM_013465.1		11625	7304874	NM_013465.1	Ahsg	NP_038493.1	ILMN_2764036	002100035	S	946	TTCAGACCACCGAACTTACCACGACCTACGCCACGCCTTCTCTCCTGTGG	16	+	22898983-22899032	16qB1	Mus musculus alpha-2-HS-glycoprotein (Ahsg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization [goid 30502] [evidence IDA]	 [goid 4869] [evidence IEA]	fetuin-A	fetuin-A
Mus musculus	RefSeq	ILMN_223431	ILMN_223431	AHSG	NM_013465.1	NM_013465.1		11625	7304874	NM_013465.1	Ahsg	NP_038493.1	ILMN_2993745	006480326	S	1354	CCCACTGACCTCATATAAAACAGTTGCAACCACGACTCTGAAAGGTGCTC	16	+	22899391-22899440	16qB1	Mus musculus alpha-2-HS-glycoprotein (Ahsg), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization [goid 30502] [evidence IDA]	 [goid 4869] [evidence IEA]	fetuin-A	fetuin-A
Mus musculus	RefSeq	ILMN_219277	ILMN_219277	GTF2B	NM_145546.1	NM_145546.1		229906	21704075	NM_145546.1	Gtf2b	NP_663521.1	ILMN_1247789	002850594	S	965	CCCCAGCTATAAGCTGAGGCAACTAAGTGTCACACTCTTAATGTACATGG	3	+	142446282-142446293:142446294-142446331	3qH1	Mus musculus general transcription factor IIB (Gtf2b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	MGC6859	MGC6859
Mus musculus	MEEBO	ILMN_214347	ILMN_214347	9430076C15RIK	scl0320189.1_2	NM_177095.2			31342795	NM_177095.2	9430076C15Rik		ILMN_2761025	006580224	S	45	CGGGCTCGGCTCTTGCCTTCTCCACACTTGTTTGATTTATGAGGAATCCA										
Mus musculus	MEEBO	ILMN_214347	ILMN_214347	9430076C15RIK	scl0320189.1_2	NM_177095.2			31342795	NM_177095.2	9430076C15Rik		ILMN_1259667	004260167	S	44	CCGGGCTCGGCTCTTGCCTTCTCCACACTTGTTTGATTTATGAGGAATCC										
Mus musculus	MEEBO	ILMN_214347	ILMN_214347	9430076C15RIK	scl0320189.1_2	NM_177095.2			31342795	NM_177095.2	9430076C15Rik		ILMN_1213688	001780754	S	3	ATGTATTGTAATCTTTGCTCAGTCCAACGTGGTCCCTTCACCCGGGCTCG										
Mus musculus	RefSeq	ILMN_196845	ILMN_196845	LOC240049	XM_139908.1	XM_139908.1			20899617	XM_139908.1	LOC240049		ILMN_1256621	003140142	S	1146	GGCTTCGATAGGTGGTGAGGCTGATTTACAAGGAGCTGTCTGCTGGCTCC										
Mus musculus	MEEBO	ILMN_220097	ILMN_220097	ATP5F1	scl21701.9.1_3	NM_009725.1			33859511	NM_009725.1	Atp5f1		ILMN_2717599	001400681	S	950	CTGATCATAATTTGAATAAGCAACTTGCAGCAACTTGCTGCCCAACTGAA						All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201175	ILMN_201175	LOC384893	XM_357925.1	XM_357925.1			38089625	XM_357925.1	LOC384893		ILMN_1252058	001090059	S	1265	CCGATAGCTTGTGCTTGGGGAAGGTGCCTGCTTGCATTCGGAACGATGGA										
Mus musculus	RefSeq	ILMN_198887	ILMN_315044	LOC675985	XM_001476577.1	XM_001476577.1		675985	149258985	XM_001476577.1	LOC675985	XP_001476627.1	ILMN_1243256	001170017	S	706	AAGTGCCAGGAACAGACTGCCAAGAGACGTAGGCTGTACTCGCTGAGAGC	8	+	91330956-91331005	8qC3	PREDICTED: Mus musculus similar to ribosomal protein S6 (LOC675985), mRNA.					
Mus musculus	RefSeq	ILMN_212300	ILMN_212300	SERPINE2	NM_009255.2	NM_009255.2		20720	31982003	NM_009255.2	Serpine2	NP_033281.1	ILMN_2883164	002120634	S	2049	GCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTACTCTTTGGATTGGC	1	-	79673272-79673321	1qC4	Mus musculus serine (or cysteine) peptidase inhibitor, clade E, member 2 (Serpine2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	PAI-1; PN-1; PI7; B230326M24Rik; Spi4	PAI-1; PN-1; PI7; B230326M24Rik; Spi4
Mus musculus	Riken	ILMN_206151	ILMN_206151	CRMP5-PENDING	ri|C230011O14|PX00173M15|AK082132|604					AK082132	Crmp5-pending		ILMN_1250014	003370707	S	464	CTTCCAGAGGACCAAGGTTCAATTCCCAGCACGGCACAGCAGCTCACAAC										
Mus musculus	Riken	ILMN_206169	ILMN_206169	D130027K14RIK	ri|D130027K14|PX00183K12|AK083865|4265					AK083865	D130027K14Rik		ILMN_1219705	001090152	S	3954	GTAATGTGTTACATGGGCAGCCCTTTCTCTGATGCCTCCGGTGTGCTGGC										
Mus musculus	Riken	ILMN_206266	ILMN_206266	KREMEN-PENDING	ri|D030046E08|PX00180H21|AK083565|3187					AK083565	Kremen-pending		ILMN_1233658	003890289	S	3043	GCCGTCTGTGGCTGTCAGGTGCTCTTTTTGTTTGGTTGGGTCTGTCCTCC										
Mus musculus	RefSeq	ILMN_255361	ILMN_255361	VAX1	NM_009501.1	NM_009501.1		22326	6678556	NM_009501.1	Vax1	NP_033527.1	ILMN_3067046	004050672	I	953	CGGCCTTCGAGCCTTACTCCCGGACCAACAATAAAGAAGGGGCCGAGAAA	19	-	59240691-59240740	19qD3	Mus musculus ventral anterior homeobox containing gene 1 (Vax1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA that is assembled into chromatin [goid 31490] [evidence IDA]	MGC130490	MGC130490
Mus musculus	RefSeq	ILMN_255361	ILMN_255361	VAX1	NM_009501.1	NM_009501.1		22326	6678556	NM_009501.1	Vax1	NP_033527.1	ILMN_3145291	005900358	A	446	AGAATCGGCGGACTAAGCAGAAGAAGGACCAGGGCAAGGACTCGGAGCTG	19	-	59241198-59241247	19qD3	Mus musculus ventral anterior homeobox containing gene 1 (Vax1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA that is assembled into chromatin [goid 31490] [evidence IDA]	MGC130490	MGC130490
Mus musculus	RefSeq	ILMN_191834	ILMN_255361	VAX1	NM_009501.1	NM_009501.1		22326	6678556	NM_009501.1	Vax1	NP_033527.1	ILMN_2482634	000240102	S	585	CTTGCTGCCGCCCTGTGCCACTGGCGCTCTAGGCTCGGCGTTGCGCGGGC	19	-	59241059-59241108	19qD3	Mus musculus ventral anterior homeobox containing gene 1 (Vax1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IGI]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IMP]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA that is assembled into chromatin [goid 31490] [evidence IDA]	MGC130490	MGC130490
Mus musculus	RefSeq	ILMN_201076	ILMN_201076	LOC385019	XM_357995.1	XM_357995.1			38088704	XM_357995.1	LOC385019		ILMN_1250821	006380356	S	276	TGACACACTGATGGCTCAAGCGGTGGACAGGGACACCAACAAACCACTGG										
Mus musculus	RefSeq	ILMN_222160	ILMN_222160	MRPS21	NM_078479.2	NM_078479.2		66292	31982593	NM_078479.2	Mrps21	NP_510964.1	ILMN_2745555	002690376	S	69	ATTGCCAGGACAGTGATGGTTCAGGAGGGGAACGTGGAAGGTGCCTACCG	3	-	95674428-95674477	3qF2.1	Mus musculus mitochondrial ribosomal protein S21 (Mrps21), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	1810031B19Rik	1810031B19Rik
Mus musculus	MEEBO	ILMN_223691	ILMN_223691	ICOSL	scl38729.6.1_39	NM_015790.2			31980683	NM_015790.2	Icosl		ILMN_2767731	007610167	S	2464	GCACCAGACACACTGCCCCCCACCCCCTGCTTATGTAGGCATTGGGAACC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-4 [goid 45404] [evidence IMP]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence TAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216504	ILMN_216504	DAGLB	NM_144915.3	NM_144915.3		231871	134032008	NM_144915.3	Daglb	NP_659164.2	ILMN_2714548	001770639	S	1533	TGCGGCCCTGTTAGCCATCATGCTCCGGGGGGCCTACCCACAAGTCCGTG	5	+	144255454-144255503	5qG2	Mus musculus diacylglycerol lipase, beta (Daglb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]	E330036I19Rik; MGC27690	E330036I19Rik; MGC27690
Mus musculus	RefSeq	ILMN_190141	ILMN_227269	IFRD1	NM_013562.1	NM_013562.1		15982	7305178	NM_013562.1	Ifrd1	NP_038590.1	ILMN_1214353	001660253	S	1498	GCTCGAACAAAAGCTCGAAGCAAATGCCGAGATAAGAGAGCAGATGTTGG	12	-	40929959-40930008	12qB1	Mus musculus interferon-related developmental regulator 1 (Ifrd1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the adult somatic muscle over time, from its formation to the mature structure [goid 7527] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IMP]		Ifnl; PC4; Tis7	Ifnl; PC4; Tis7
Mus musculus	RefSeq	ILMN_223457	ILMN_223457	B230209C24RIK	NM_177235.3	NM_177235.3		320705	40254313	NM_177235.3	B230209C24Rik	NP_796209.2	ILMN_2764344	006290403	S	2126	AGCTTGGGAAGGAGGATTTTAAAGTGCAGTGCAGGGGACCCAGGGACTAC	1	-	33909013-33909062	1qB	Mus musculus RIKEN cDNA B230209C24 gene (B230209C24Rik), mRNA.					
Mus musculus	RefSeq	ILMN_186230	ILMN_186230	TYROBP	NM_011662.2	NM_011662.2		22177	40254570	NM_011662.2	Tyrobp	NP_035792.1	ILMN_2867147	000450739	S	265	CGAGGTCAAGGGACAGCGGAAGGGACCCGGAAACAACACATTGCTGAGAC	7	+	31199648-31199669:31200651-31200678	7qB1	Mus musculus TYRO protein tyrosine kinase binding protein (Tyrobp), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ly83; DAP12; KARAP	Ly83; DAP12; KARAP
Mus musculus	RefSeq	ILMN_242456	ILMN_242456	4833439L19RIK	NM_133797.1	NM_133797.1		97820	19527011	NM_133797.1	4833439L19Rik	NP_598558.1	ILMN_2943685	006110731	S	2233	GCTGGGATTGAAGGTGTGCACAGCCACACCAGCTTAAGGTTTTGTTAAAG	13	-	54561189-54561238	13qB1	Mus musculus RIKEN cDNA 4833439L19 gene (4833439L19Rik), mRNA.				C81457; 4930558H15Rik	C81457; 4930558H15Rik
Mus musculus	RefSeq	ILMN_214948	ILMN_214948	TAF1C	NM_021441.2	NM_021441.2		21341	133778984	NM_021441.2	Taf1c	NP_067416.2	ILMN_2653808	000060255	S	128	GCGCCCTTCATTGTTTAAGGCCGGTCCACTTGGCATGACTGATGGCCCTG	8	-	122128207-122128256	8qE1	Mus musculus TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C (Taf1c), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase I (Pol I), originating at a Pol I-specific promoter [goid 6360] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mTAFI95; Tafi95	mTAFI95; Tafi95
Mus musculus	RefSeq	ILMN_234344	ILMN_234344	GNPTAB	NM_001004164.2	NM_001004164.2		432486	84579826	NM_001004164.2	Gnptab	NP_001004164.2	ILMN_3162570	003310438	I	4899	AGTTTGCAGCTATACAAAAGCAGCAGGCCTCAGCCAGACTTGACCCCCGG	10|NT_039511.3	-	87874706-87874755	10qC1	Mus musculus N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits (Gnptab), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The regulated release of proteins from a cell or group of cells [goid 9306] [evidence IMP]; The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y [goid 46835] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + lysosomal-enzyme D-mannose = UMP + lysosomal-enzyme N-acetyl-D-glucosaminyl-phospho-D-mannose [goid 3976] [evidence IEA]	mKIAA1208; MGC79224; KIAA1208; EG432486	mKIAA1208; MGC79224; KIAA1208; EG432486
Mus musculus	RefSeq	ILMN_218713	ILMN_232173	OLFR574	NM_146360.2	NM_146360.2		258357	125719162	NM_146360.2	Olfr574	NP_666472.2	ILMN_2774654	003130577	S	937	CGCCAAGCCATATTCCAGCTGTTCCGATTCAAGGATGCAAGGGGCTACAG	7	+	110097917-110097966	7qE3	Mus musculus olfactory receptor 574 (Olfr574), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOR14-9	MOR14-9
Mus musculus	MEEBO	ILMN_189415	ILMN_189415	MJ-8000-190_4699	MJ-8000-190_4699						MJ-8000-190_4699		ILMN_2461051	001690577	S	2	GTTCTGCGTATAGGGGAGACTGGAGAGGTATGAGTGGAGGAACAATTATT										
Mus musculus	RefSeq	ILMN_200623	ILMN_200623	LOC383406	XM_357034.1	XM_357034.1			38084486	XM_357034.1	LOC383406		ILMN_1230550	000240603	S	161	GGGCCACAGGCCAAAAGCCCAAAGCAATGTGTAAGCCAAGAGTTGAAGGA										
Mus musculus	RefSeq	ILMN_201859	ILMN_237964	NOS1AP	NM_027528.2	NM_027528.2		70729	142384213	NM_027528.2	Nos1ap	NP_081804.1	ILMN_2545149	003460689	S	1281	CGCACCTTCCCTAGCGAGGGGCTCAGGGCAGGTTTAAAACTTAGGGAGCT	1	-	172257547-172257596	1qH3	Mus musculus nitric oxide synthase 1 (neuronal) adaptor protein (Nos1ap), transcript variant 2, mRNA. XM_994037			Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence ISO]; Interacting selectively with the enzyme nitric-oxide synthase [goid 50998] [evidence ISO]	6330408P19Rik; Capon	6330408P19Rik; Capon
Mus musculus	RefSeq	ILMN_208667	ILMN_208667	PLA2G12A	NM_183423.1	NM_183423.1		66350	34556196	NM_183423.1	Pla2g12a	NP_904359.1	ILMN_2588391	001990228	S	33	TCCTGGGAAGTACTGGGAGCCATTTGCCTTTCCTGTAGGCTGTTCCGGGA	3	+	129584134-129584183	3qG3	Mus musculus phospholipase A2, group XIIA (Pla2g12a), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]	The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IDA]	Pla2g12; mGXII-1-PLA2; GXII; 2310004B05Rik; MGC58884; mGXII-1; Rossy	Pla2g12; mGXII-1-PLA2; GXII; 2310004B05Rik; MGC58884; mGXII-1; Rossy
Mus musculus	RefSeq	ILMN_216036	ILMN_226748	1700001J03RIK	NM_001008547.1	NM_001008547.1		69282	56606116	NM_001008547.1	1700001J03Rik	NP_001008547.1	ILMN_2666574	007150630	S	438	TCCACTGGTTTAAGAAATTCCCCAAGGATTTTTGTGAGTCCCCAGACCTG	5	-	146995149-146995198	5qG3	Mus musculus RIKEN cDNA 1700001J03 gene (1700001J03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_197272	ILMN_197272	LOC381380	XM_358561.1	XM_358561.1			38074917	XM_358561.1	LOC381380		ILMN_1215163	000770095	S	731	GCTGCAGGATGCTCCACTAGAGAGGCAGAGGCACATCACCTGCTTATCGG										
Mus musculus	RefSeq	ILMN_217333	ILMN_217333	NDUFA8	NM_026703.2	NM_026703.2		68375	133893199	NM_026703.2	Ndufa8	NP_080979.1	ILMN_2682019	005900242	S	169	ATAAGGAGTTTATGCTGTGCCGCTGGGAAGAGAAGGACCCAAGGCGCTGC	2	-	35899916-35899965	2qB	Mus musculus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 (Ndufa8), nuclear gene encoding mitochondrial protein, mRNA.	The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		AW261656; 0610033L03Rik	AW261656; 0610033L03Rik
Mus musculus	RefSeq	ILMN_194423	ILMN_249282	KIF21A	NM_016705.2	NM_016705.2		16564	141802459	NM_016705.2	Kif21a	NP_057914.1	ILMN_2718716	004290706	S	4727	ACTGCTGCTGATGATCGAACCGTGAGAATCTGGAAGGCCCACAACTTGCA	15	-	90764935-90764974:90766066-90766075	15qE3	Mus musculus kinesin family member 21A (Kif21a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	AI850764; mKIAA1708	AI850764; mKIAA1708
Mus musculus	RefSeq	ILMN_210844	ILMN_210844	OLFR531	NM_146953.1	NM_146953.1		258955	22129014	NM_146953.1	Olfr531	NP_667164.1	ILMN_1215808	005130040	S	546	GCTCTCTTGTGCTCCAACACAATTGAACGAGGCCATGGCTTTCGCTGCAG	7	-	147586348-147586397	7qF4	Mus musculus olfactory receptor 531 (Olfr531), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC123486; MGC123485; MOR251-3	MGC123486; MGC123485; MOR251-3
Mus musculus	MEEBO	ILMN_210651	ILMN_210651	SDHA	scl066945.1_30	XM_127445.5			38075375	XM_127445.5	Sdha		ILMN_1240450	000650333	S	2399	CAGGTCCTTCATAATTTGAAGGAAAGTTTGGATATGGTAAGTATCGAGCC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: succinate + quinone = fumarate + quinol [goid 8177] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189986	ILMN_189986	7330410H16RIK	scl078097.1_55						7330410H16Rik		ILMN_2466180	002120246	S	17	TGTCTCACCTTTCATTGTTGGTCAAGTTCTTAGCTACCATCATTTGGAGG										
Mus musculus	Riken	ILMN_203422	ILMN_203422	B230213K04RIK	ri|B230213K04|PX00069L11|AK045586|864					AK045586	B230213K04Rik		ILMN_2557183	000830246	S	597	GGACCAAGATGATATTACTGGTGAGAAAGTGGACTTCAGTAGTTCCTCTG										
Mus musculus	RefSeq	ILMN_212119	ILMN_212119	EFTUD1	NM_175317.2	NM_175317.2		101592	31341587	NM_175317.2	Eftud1	NP_780526.1	ILMN_1223140	002680332	S	3170	AAGCTTTGGCTTTGCGGATGAGATCAGGAAGAGGACCAGCGGACTGGCCA	7	+	89921073-89921122	7qD3	Mus musculus elongation factor Tu GTP binding domain containing 1 (Eftud1), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]	4932434J20Rik; AU022896; AI451340; 6030468D11Rik; AU019507; D7Ertd791e	4932434J20Rik; AU022896; AI451340; 6030468D11Rik; AU019507; D7Ertd791e
Mus musculus	Riken	ILMN_205545	ILMN_205545	E330026G11RIK	ri|E330026G11|PX00212G06|AK054445|1620					AK054445	E330026G11Rik		ILMN_2573376	007320095	S	1084	TCAGATGACTAGAACTGGTGGTTGTGTGGCCCATGCGTGCTGCCCCTTGG										
Mus musculus	MEEBO	ILMN_194021	ILMN_194021	A330102I10RIK	scl077920.4_150						A330102I10Rik		ILMN_1226919	003800471	S	20	GCGCCTGCCTGGAGTGGTGGTATGAGTGCCCAATCTCAACGAAACAACCA										
Mus musculus	MEEBO	ILMN_219459	ILMN_219459	2310005P05RIK	scl37185.9.1_30	NM_026189.2			27754084	NM_026189.2	2310005P05Rik		ILMN_2709179	002190048	S	2141	AGCCAACATTAAACATGAGCGATGATGACATCACTCTTTCCCGCCTCTGA										
Mus musculus	RefSeq	ILMN_255595	ILMN_255595	EG434280	NM_001013812.1	NM_001013812.1		434280	85701497	NM_001013812.1	EG434280	NP_001013834.1	ILMN_3161785	002190184	S	4684	CCAGGGATCTAACTCAGGCCACCTGGCTTGGCACCAACTGCCTTTGAGAT	8	+	12436347-12436396	8qA1.1	Mus musculus predicted gene, EG434280 (EG434280), mRNA.					
Mus musculus	RefSeq	ILMN_210984	ILMN_210984	4121402D02RIK	NM_028722.1	NM_028722.1		74026	21311987	NM_028722.1	4121402D02Rik	NP_082998.1	ILMN_2746421	000050725	S	1620	GTGTCGTTGGCACCAGCCTCCCCCATCACCGTTACCATTACGGGAATCCT	11	+	98661620-98661669	11qD	Mus musculus RIKEN cDNA 4121402D02 gene (4121402D02Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		Msl-1; AA682082; 4930463F05Rik; 2810017F12Rik	Msl-1; AA682082; 4930463F05Rik; 2810017F12Rik
Mus musculus	RefSeq	ILMN_210984	ILMN_210984	4121402D02RIK	NM_028722.1	NM_028722.1		74026	21311987	NM_028722.1	4121402D02Rik	NP_082998.1	ILMN_1244356	005570348	S	2931	GGATTCCTTAGTGGGGCTTGATCCTATTAGCCAAACTTTTGGTGGTGAGG	11	+	98667511-98667560	11qD	Mus musculus RIKEN cDNA 4121402D02 gene (4121402D02Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		Msl-1; AA682082; 4930463F05Rik; 2810017F12Rik	Msl-1; AA682082; 4930463F05Rik; 2810017F12Rik
Mus musculus	RefSeq	ILMN_187752	ILMN_251929	UBE2F	NM_026454.3	NM_026454.3		67921	148747339	NM_026454.3	Ube2f	NP_080730.1	ILMN_2614522	005420458	S	1150	GACCCTACCTAGATGTGAAGCTTCCCAGAATGCATAGTCATTCACTGTAG				1qD	Mus musculus ubiquitin-conjugating enzyme E2F (putative) (Ube2f), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	2510010F15Rik; AI851109	2510010F15Rik; AI851109
Mus musculus	RefSeq	ILMN_187752	ILMN_251929	UBE2F	NM_026454.3	NM_026454.3		67921	148747339	NM_026454.3	Ube2f	NP_080730.1	ILMN_2590350	005960333	S	175	CTCAAAGGATCCCGGACATCAGCCTCCACATCTGACTCTACCCGGAGGGT				1qD	Mus musculus ubiquitin-conjugating enzyme E2F (putative) (Ube2f), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	2510010F15Rik; AI851109	2510010F15Rik; AI851109
Mus musculus	Riken	ILMN_205104	ILMN_205104	MAP3K5	ri|D830016F14|PX00199M11|AK052875|2647					AK052875	Map3k5		ILMN_2570019	006380068	S	2515	TCCACGTAAGAAAACTGTAAGAACACTTTGCGGGGCTGGGGATCTGCCAC							A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	RefSeq	ILMN_227456	ILMN_227456	BCL2A1D	NM_007536.2	NM_007536.2		12047	118131097	NM_007536.2	Bcl2a1d	NP_031562.1	ILMN_3006505	003180408	S	122	GCCAGGGAAGATGTCTGAGTACGAGTTCATGTATATCCACTCCCTGGCTG	9	-	88626517-88626557:88626558-88626566	9qE3.1	Mus musculus B-cell leukemia/lymphoma 2 related protein A1d (Bcl2a1d), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A1-d	A1-d
Mus musculus	RefSeq	ILMN_210296	ILMN_210296	AVPR2	NM_019404.1	NM_019404.1		12000	9506412	NM_019404.1	Avpr2	NP_062277.1	ILMN_2604189	002340110	S	1733	TCAGGAATCTGTGATATAAGCAACCAAGACTGTATTTTTGAGAGCAGGTC	X	+	71138476-71138525	XqA7.3	Mus musculus arginine vasopressin receptor 2 (Avpr2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IMP]; The appearance of interferon-gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon-gamma is also known as type II interferon [goid 32609] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]	DI1; V2R; MGC124213; DIR; MGC124214; MGC129321; ADHR; ND1; MGC124215	DI1; V2R; MGC124213; DIR; MGC124214; MGC129321; ADHR; ND1; MGC124215
Mus musculus	RefSeq	ILMN_199176	ILMN_226964	LOC192895	XR_001984.1	XR_001984.1		192895	94390067	XR_001984.1	LOC192895		ILMN_1233964	003440433	S	639	ACAGAGGCCAAGGCCGCTTCCATTGTGAGGCAGTCTGCACACCTCCTTGT	11	+	48412416-48412465	11qB1.2	PREDICTED: Mus musculus similar to chaperonin subunit 7 (eta) (LOC192895), mRNA.					
Mus musculus	RefSeq	ILMN_242938	ILMN_242938	CDC25B	NM_023117.1	NM_023117.1		12531	12963486	NM_023117.1	Cdc25b	NP_075606.1	ILMN_2830898	002470360	S	2506	CCCCATCCTCACTACTGTGAACCCCAGAGCCTCGCTGGTCAGCACTTGCT	2	+	131023778-131023827	2qF1	Mus musculus cell division cycle 25 homolog B (S. pombe) (Cdc25b), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IMP]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through M phase, the part of the mitotic cell cycle during which mitosis takes place [goid 87] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The cell cycle process whereby the first meiotic division occurs in the female germline [goid 7144] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]	AI604853	AI604853
Mus musculus	RefSeq	ILMN_216798	ILMN_216798	PKLR	NM_013631.1	NM_013631.1		18770	8567389	NM_013631.1	Pklr	NP_038659.1	ILMN_2704285	001430347	S	1728	GCTATACCAACATTATGCGGGTGCTGACCATATCCTGAAACGCCTCTCCC	3	+	88949457-88949495:88949496-88949506	3qF1	Mus musculus pyruvate kinase liver and red blood cell (Pklr), mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IDA]	Pk-1; Pk1	Pk-1; Pk1
Mus musculus	RefSeq	ILMN_216798	ILMN_216798	PKLR	NM_013631.1	NM_013631.1		18770	8567389	NM_013631.1	Pklr	NP_038659.1	ILMN_2944041	002070176	S	1407	GCAATTGGAGCCGTGGAGGCTTCCTTCAAGTGCTGTGCCGCAGCCATCAT	3	+	88947228-88947277	3qF1	Mus musculus pyruvate kinase liver and red blood cell (Pklr), mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IDA]	Pk-1; Pk1	Pk-1; Pk1
Mus musculus	RefSeq	ILMN_261538	ILMN_261538	NADK	NM_138671.1	NM_138671.1		192185	20149759	NM_138671.1	Nadk	NP_619612.1	ILMN_2868482	004670066	S	2600	GGAGCCCTAAGTGGTCTGGGTTCAGTGCTGTTATCATGGTGACTCGTCCC	4	+	154964786-154964835	4qE2	Mus musculus NAD kinase (Nadk), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + NAD+ = ADP + NADP+ [goid 3951] [evidence ISS]	BC004012; MGC7589	BC004012; MGC7589
Mus musculus	RefSeq	ILMN_258011	ILMN_258011	EG433224	NR_002891.1	NR_002891.1		433224	86198299	NR_002891.1	EG433224		ILMN_3150205	001470519	A	1608	AAGCAGGCAGATCCTGAGGTCCAGAGCAGCCCTGGCTACACAGGGAAACA	19	+	12981323-12981372	19qA	Mus musculus predicted gene, EG433224 (EG433224), non-coding RNA.					
Mus musculus	RefSeq	ILMN_209157	ILMN_235638	1700028J19RIK	XM_924669.2	XM_924669.2		70004	94380306	XM_924669.2	1700028J19Rik	XP_929762.1	ILMN_2593083	003610324	S	749	TCAACTACTCAGGGCACTGATGAGTCCCCGTGGCCAGATTCCTCCACCTC				7qB4	PREDICTED: Mus musculus RIKEN cDNA 1700028J19 gene, transcript variant 3 (1700028J19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_186510	ILMN_258897	SAG	NM_009118.2	NM_009118.2		20215	70980544	NM_009118.2	Sag	NP_033144.1	ILMN_2730436	003840653	S	1583	GAAGACTTAGCCTAGATGCCTAGAAACTGCTTGTAGTTCCGGGTGCCTTG	1	+	89741597-89741598:89741599-89741646	1qD	Mus musculus retinal S-antigen (Sag), mRNA.		The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a phosphorylated protein [goid 51219] [evidence IDA]; Interacting selectively with an opsin, any of a group of hydrophobic, integral membrane glycoproteins located primarily in the disc membrane of rods or cones, involved in photoreception [goid 2046] [evidence IDA]	Irbp; A930001K18Rik	Irbp; A930001K18Rik
Mus musculus	Riken	ILMN_206285	ILMN_206285	HSD17B12	ri|2810004A21|ZX00053K17|AK076088|726					AK076088	Hsd17b12		ILMN_1234796	004850100	S	534	CCTCCTCTTTGGAGGGTCCAGGCCTTGTCTTGAGAGTGGATCTTGGCTTC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]		
Mus musculus	RefSeq	ILMN_240876	ILMN_240876	OLFR1275	NM_001011795.1	NM_001011795.1		257980	58801355	NM_001011795.1	Olfr1275	NP_001011795.1	ILMN_3161942	007150437	S	676	CGGAAACAGTCCTTGGGCAGTTTGTCCAAGGCCTTCTCTACACTTTCTGC	2	-	111071223-111071272	2qE3	Mus musculus olfactory receptor 1275 (Olfr1275), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR245-18	MOR245-18
Mus musculus	RefSeq	ILMN_239054	ILMN_239054	RPRML	NM_001033212.1	NM_001033212.1		104582	85701721	NM_001033212.1	Rprml	NP_001028384.1	ILMN_2968147	002680523	S	952	GCCAGCTCCAAGGAGGGCTCAGGGAAGAGGTGCATCGCTGAGATTTTGCA	11	+	103466550-103466599	11qE1	Mus musculus reprimo-like (Rprml), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AW049332	AW049332
Mus musculus	RefSeq	ILMN_209825	ILMN_209825	MRPL28	NM_024227.2	NM_024227.2		68611	26787988	NM_024227.2	Mrpl28	NP_077189.2	ILMN_1237265	007330673	S	857	GCCGAGCACACAGTTCCTGTGGTAGACTTTTCAGAGAACCCTTCTGTGCC	17	+	26263379-26263428	17qA3.3	Mus musculus mitochondrial ribosomal protein L28 (Mrpl28), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]			MGC8184; MAAT1; 1110015G04Rik; p15	MGC8184; MAAT1; 1110015G04Rik; p15
Mus musculus	RefSeq	ILMN_200341	ILMN_200341	LOC381682	XM_355657.1	XM_355657.1			38081355	XM_355657.1	LOC381682		ILMN_1253524	000540471	S	28	TCGGGTCTGCAGAGTGCTGCACCGGAGGTGAAGGCGCTTCCTCTAGGGGC										
Mus musculus	RefSeq	ILMN_234308	ILMN_234308	HIST2H3C1	NM_178216.1	NM_178216.1		15077	30061400	NM_178216.1	Hist2h3c1	NP_835734.1	ILMN_3040069	000290603	I	86	CGGTATCAGGTCCCCGAGTGCTCCTCGTTTGGGTGTCTTCCGTCTTCGCC	3	+	96049562-96049611	3qF2.1	Mus musculus histone cluster 2, H3c1 (Hist2h3c1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	BE691662; H3f2; Hist2h3ca1; H3-615	BE691662; H3f2; Hist2h3ca1; H3-615
Mus musculus	RefSeq	ILMN_186566	ILMN_257564	GLG1	NM_009149.2	NM_009149.2		20340	118130514	NM_009149.2	Glg1	NP_033175.1	ILMN_1253692	007320136	S	3745	CAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTG	8	-	113681533-113681582	8qE1	Mus musculus golgi apparatus protein 1 (Glg1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CFR-1; CFR; MG160; AI593353; Selel; MG-160; AW537898; ESL-1	CFR-1; CFR; MG160; AI593353; Selel; MG-160; AW537898; ESL-1
Mus musculus	RefSeq	ILMN_218395	ILMN_218395	CPSF3	NM_018813.2	NM_018813.2		54451	31980903	NM_018813.2	Cpsf3	NP_061283.2	ILMN_2870410	000520678	S	1990	AGTGTCACAGTGGACGGGAAAACAGCAAATATTAATCTGGAGACTCGGGC	12	+	21319692-21319724:21320509-21320525	12qA1.2-qA1.3	Mus musculus cleavage and polyadenylation specificity factor 3 (Cpsf3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multisubunit complex that binds to the canonical AAUAAA hexamer and to U-rich upstream sequence elements on the pre-mRNA, thereby stimulating the otherwise weakly active and nonspecific polymerase to elongate efficiently RNAs containing a poly(A) signal [goid 5847] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence ISO]	MGC118660	MGC118660
Mus musculus	RefSeq	ILMN_218395	ILMN_218395	CPSF3	NM_018813.2	NM_018813.2		54451	31980903	NM_018813.2	Cpsf3	NP_061283.2	ILMN_1247493	007050403	S	1665	CTACCAGCTCCAGAAATTGACGGGTGATGTAGAAGAATTAGAAATTCAAG	12	+	21313945-21313952:21314765-21314806	12qA1.2-qA1.3	Mus musculus cleavage and polyadenylation specificity factor 3 (Cpsf3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multisubunit complex that binds to the canonical AAUAAA hexamer and to U-rich upstream sequence elements on the pre-mRNA, thereby stimulating the otherwise weakly active and nonspecific polymerase to elongate efficiently RNAs containing a poly(A) signal [goid 5847] [evidence ISO]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [evidence ISO]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence ISO]	MGC118660	MGC118660
Mus musculus	RefSeq	ILMN_217216	ILMN_217216	SMARCA5	NM_053124.2	NM_053124.2		93762	40254123	NM_053124.2	Smarca5	NP_444354.2	ILMN_2680424	003140754	S	4547	GTGCAAATTGGGTACATAAGCAGTTCTCCATTTTTCTAAGGGAATGCAAT	8	-	83235334-83235383	8qC2	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (Smarca5), mRNA.	Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors [goid 43044] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; The formation or destruction of chromatin structures [goid 6333] [evidence IDA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 31491] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IMP]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MommeD4; 4933427E24Rik; Snf2h; D030040M08Rik; D330027N15Rik	MommeD4; 4933427E24Rik; Snf2h; D030040M08Rik; D330027N15Rik
Mus musculus	RefSeq	ILMN_198442	ILMN_318650	LOC545289	XR_033751.1	XR_033751.1		545289	149270670	XR_033751.1	LOC545289		ILMN_1260380	006270142	S	413	TTAGCAGAACAGTCAGCACTACCAGCTCAGGAACAGCTGCGGCCCAAGTC				19qC3	PREDICTED: Mus musculus similar to Orphan nuclear receptor NR1D1 (V-erbA-related protein EAR-1) (Rev-erbA-alpha) (LOC545289), misc RNA.					
Mus musculus	RefSeq	ILMN_191623	ILMN_226743	2410025L10RIK	NM_028596.2	NM_028596.2		381668	125347475	NM_028596.2	2410025L10Rik	NP_082872.2	ILMN_2480713	002340673	S	3021	AATGTAAATACTCTGTTGATATAATTATAAAACTTATTAAATTCTTAACC	5	-	110791466-110791515	5qF	Mus musculus RIKEN cDNA 2410025L10 gene (2410025L10Rik), mRNA.				Gm1049; AI467568; mKIAA1545	Gm1049; AI467568; mKIAA1545
Mus musculus	RefSeq	ILMN_226743	ILMN_226743	2410025L10RIK	NM_028596.2	NM_028596.2		381668	125347475	NM_028596.2	2410025L10Rik	NP_082872.2	ILMN_2971721	004670689	S	2866	GGCCCGGCTCTGGCCTTCCCTTGGTACTTGGAACCGACGTTACAGATATA	5	-	110791621-110791670	5qF	Mus musculus RIKEN cDNA 2410025L10 gene (2410025L10Rik), mRNA.				Gm1049; AI467568; mKIAA1545	Gm1049; AI467568; mKIAA1545
Mus musculus	Riken	ILMN_204296	ILMN_204296	A830081L15RIK	ri|A830081L15|PX00155H24|AK044025|2877					AK044025	A830081L15Rik		ILMN_1219179	006980044	S	2771	GAGTTTGAGGTCAGCCTGGTCTATGTGATAAGTTTCAGGCCAGCCAGGGC										
Mus musculus	MEEBO	ILMN_209869	ILMN_209869	2900006N09RIK	scl0004067.1_52	XM_132263.4			38080374	XM_132263.4	2900006N09Rik		ILMN_1242462	004540446	S	575	CCGAAGAAACCTGGCTGATGAAAGCAGTTTTGGAGTTACAGTTTCCTCAG										
Mus musculus	MEEBO	ILMN_209869	ILMN_209869	2900006N09RIK	scl0004067.1_52	XM_132263.4			38080374	XM_132263.4	2900006N09Rik		ILMN_2631123	000290382	S	32	CAGTTCTCTGCGCCCCCTGGTAGAGAGGATAGCAAGCAACACAGCTACCC										
Mus musculus	RefSeq	ILMN_193131	ILMN_252071	ENG	NM_007932.1	NM_007932.1		13805	6679648	NM_007932.1	Eng	NP_031958.1	ILMN_1229161	005910239	S	2568	ACACGGCACTGCCGGTCACACCCATGCTGCTTAGAAGCCTAAGCCTCTGC	2	+	32537324-32537373	2qB	Mus musculus endoglin (Eng), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence TAS]	CD105; AI528660; S-endoglin	CD105; AI528660; S-endoglin
Mus musculus	RefSeq	ILMN_260551	ILMN_213148	CLDN19	NM_153105.6	NM_153105.6		242653	146149140	NM_153105.6	Cldn19	NP_694745.1	ILMN_3163350	000110167	A	667	GGTTCCTTTCTCTGCTGCACATGCCCAGAGCCGGAGAGGGCGAACAGCAT				4qD2.1	Mus musculus claudin 19 (Cldn19), transcript variant 2, mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence ISA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence ISA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	A neurological process that causes the sequential depolarization of a neuron's cell membrane along an axon [goid 19227] [evidence IMP]; The formation of an apical junction, a functional unit located near the cell apex at the points of contact between epithelial cells composed of the tight junction, the zonula adherens junction and the desmosomes, by the aggregation, arrangement and bonding together of its constituents [goid 43297] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IMP]	MGC141195	MGC141195
Mus musculus	RefSeq	ILMN_223496	ILMN_322550	LOC100039175	XM_001472394.1	XM_001472394.1		100039175	149265328	XM_001472394.1	LOC100039175	XP_001472444.1	ILMN_1225825	006510593	S	758	CCGCACTTCCAACTTTCTAATTCAGAGACAGACCCTGGGAACTGACTGAC	14	-	26847509-26847558	14qA3	PREDICTED: Mus musculus similar to Placenta specific 9 (LOC100039175), mRNA.					
Mus musculus	RefSeq	ILMN_186540	ILMN_186540	V1RD16	NM_206869.1	NM_206869.1		232962	46047416	NM_206869.1	V1rd16	NP_996752.1	ILMN_1222469	000990059	S	759	AAATTTTATTTGTACCATCTTTCACATGTTTTTTGTAGATTCTTATCTCT	7	+	24738191-24738240	7qA3	Mus musculus vomeronasal 1 receptor, D16 (V1rd16), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gm475	Gm475
Mus musculus	RefSeq	ILMN_213778	ILMN_213778	TRAF3IP2	NM_134000.3	NM_134000.3		103213	118129914	NM_134000.3	Traf3ip2	NP_598761.2	ILMN_2640675	005870288	S	2254	GGTGACAGAAACAAACATCTATGACCACAAAAACTCTCATCACTTCAGCT	10	+	39374500-39374549	10qB1	Mus musculus Traf3 interacting protein 2 (Traf3ip2), mRNA.		An immune response mediated through a body fluid [goid 6959] [evidence IMP]; The process of apoptosis in B cells [goid 1783] [evidence IMP]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI429613; Act1	AI429613; Act1
Mus musculus	RefSeq	ILMN_213778	ILMN_213778	TRAF3IP2	NM_134000.3	NM_134000.3		103213	118129914	NM_134000.3	Traf3ip2	NP_598761.2	ILMN_1257598	004590594	S	142	GGTTGCTGGTTCTCTCTGGTGAACGCAAGAGGTTTCTGTTTTAAGAAATA	10	+	39332881-39332930	10qB1	Mus musculus Traf3 interacting protein 2 (Traf3ip2), mRNA.		An immune response mediated through a body fluid [goid 6959] [evidence IMP]; The process of apoptosis in B cells [goid 1783] [evidence IMP]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI429613; Act1	AI429613; Act1
Mus musculus	RefSeq	ILMN_213778	ILMN_213778	TRAF3IP2	NM_134000.3	NM_134000.3		103213	118129914	NM_134000.3	Traf3ip2	NP_598761.2	ILMN_1232123	002350575	S	1887	GTCAGGGAAGCATGAACTTCAGATTCATCCCTGTGCTCTTCCCAAATGCC	10	+	39370731-39370780	10qB1	Mus musculus Traf3 interacting protein 2 (Traf3ip2), mRNA.		An immune response mediated through a body fluid [goid 6959] [evidence IMP]; The process of apoptosis in B cells [goid 1783] [evidence IMP]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI429613; Act1	AI429613; Act1
Mus musculus	RefSeq	ILMN_186512	ILMN_186512	TNFSF10	NM_009425.2	NM_009425.2		22035	79750226	NM_009425.2	Tnfsf10	NP_033451.1	ILMN_2436146	003290707	S	1141	GAGAGACTTGCTTTCTTTCCGCAAAATGAGATCACTGTAGCCTTTCAATG	3	+	27234784-27234833	3qA3	Mus musculus tumor necrosis factor (ligand) superfamily, member 10 (Tnfsf10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	AI448571; APO-2L; Ly81; A330042I21Rik; Trail; TL2	AI448571; APO-2L; Ly81; A330042I21Rik; Trail; TL2
Mus musculus	RefSeq	ILMN_218211	ILMN_218211	ARL5A	NM_182994.2	NM_182994.2		75423	118130709	NM_182994.2	Arl5a	NP_892039.1	ILMN_1221102	004830477	S	3905	GACAGGGTTTCCTTACTTAACGGATTTGAGCGCTTCTGTTCTCCAAACAC	2	-	52254728-52254777	2qC1.1	Mus musculus ADP-ribosylation factor-like 5A (Arl5a), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	T25534; AW610751; 2410015N24Rik; Arl5; 2810410P22Rik; AA408731	T25534; AW610751; 2410015N24Rik; Arl5; 2810410P22Rik; AA408731
Mus musculus	RefSeq	ILMN_210013	ILMN_210013	FGF14	NM_207667.2	NM_207667.2		14169	145207999	NM_207667.2	Fgf14	NP_997550.1	ILMN_2622016	005700731	S	3536	GTTGTCTTTAAAAGCATTTATTACTGTAAGTAGGTATTCAAGTGGTTTAT				14qE5	Mus musculus fibroblast growth factor 14 (Fgf14), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MGC129318; mFHF-4(1B); Fhf4; MGC129319; FHF-4	MGC129318; mFHF-4(1B); Fhf4; MGC129319; FHF-4
Mus musculus	RefSeq	ILMN_210013	ILMN_210013	FGF14	NM_207667.2	NM_207667.2		14169	145207999	NM_207667.2	Fgf14	NP_997550.1	ILMN_1254854	001580142	S	343	GTCTCAAAGAGATATACCACGTGAGGGGAAAAAACTGGGAGAAGATCCGG				14qE5	Mus musculus fibroblast growth factor 14 (Fgf14), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MGC129318; mFHF-4(1B); Fhf4; MGC129319; FHF-4	MGC129318; mFHF-4(1B); Fhf4; MGC129319; FHF-4
Mus musculus	RefSeq	ILMN_193208	ILMN_321954	2310034G01RIK	XM_001479129.1	XM_001479129.1		75579	149270707	XM_001479129.1	2310034G01Rik	XP_001479179.1	ILMN_2495006	000650504	S	851	GCCAAGCAATTCCCAGCTTGGAAACGGAAGTAAATAAATGAGCGACGTCC				19qC3	PREDICTED: Mus musculus RIKEN cDNA 2310034G01 gene (2310034G01Rik), mRNA.					
Mus musculus	Riken	ILMN_205271	ILMN_205271	AU022508	ri|7530433O15|PX00312E24|AK033065|924					AK033065	AU022508		ILMN_1257863	004810619	S	301	GCAGTCATGTTGTGCTTATACAGGCCGCTTTCTGTAGGTCTGTCTGTCAC										
Mus musculus	RefSeq	ILMN_198213	ILMN_258409	EG668850	XR_002259.2	XR_002259.2		668850	149268933	XR_002259.2	EG668850		ILMN_1256844	005890661	S	9	CATACTTGGGCCTGGCAGAATGGCTCCCGCAAAGAAGGGTGGCGAGAAGA	17	+	85897954-85898003	17qE4	PREDICTED: Mus musculus predicted gene, EG668850 (EG668850), misc RNA.					
Mus musculus	RefSeq	ILMN_218549	ILMN_242785	TRRAP	NM_001081362.1	NM_001081362.1		100683	124486948	NM_001081362.1	Trrap	NP_001074831.1	ILMN_2697174	007650201	S	12249	CTGCCGGCTTGTTGGATATCTTTTAGAGATTTACTATCATTGTACCAGAA	5	+	145620415-145620464	5qG2	Mus musculus transformation/transcription domain-associated protein (Trrap), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]	Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]	AI481500	AI481500
Mus musculus	RefSeq	ILMN_191814	ILMN_257151	STX3	NM_001025307.1	NM_001025307.1		20908	70778801	NM_001025307.1	Stx3	NP_001020478.1	ILMN_2665125	005550397	S	1419	CTGTGGCAGATACCAAAAAGGCGGTCAAGTATCAGAGTGAAGCCCGGAGG	19	-	11851660-11851660:11857290-11857338	19qA	Mus musculus syntaxin 3 (Stx3), transcript variant B, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	AV006285; AW536415; AA960228	AV006285; AW536415; AA960228
Mus musculus	RefSeq	ILMN_191814	ILMN_257151	STX3	NM_001025307.1	NM_001025307.1		20908	70778801	NM_001025307.1	Stx3	NP_001020478.1	ILMN_1254237	004760671	S	2831	GCTCTACATACACTAGCTCCTAAAGGGACAGAGAGCCAAGATGCCCCTCC	19	-	11849749-11849798	19qA	Mus musculus syntaxin 3 (Stx3), transcript variant B, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	AV006285; AW536415; AA960228	AV006285; AW536415; AA960228
Mus musculus	RefSeq	ILMN_210961	ILMN_210961	ACADS	NM_007383.2	NM_007383.2		11409	31982521	NM_007383.2	Acads	NP_031409.2	ILMN_2806676	000270673	S	1679	GTGGCCCAGATGGCACGGAGTTTCAGTGTTTGAGTCCCCAGGGTTGCTGT	5	-	115560416-115560465	5qF	Mus musculus acyl-Coenzyme A dehydrogenase, short chain (Acads), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: butanoyl-CoA + ETF = 2-butenoyl-CoA + reduced ETF [goid 4085] [evidence IEA]	SCAD; Bcd-1; AI196007; Bcd1	SCAD; Bcd-1; AI196007; Bcd1
Mus musculus	RefSeq	ILMN_210961	ILMN_210961	ACADS	NM_007383.2	NM_007383.2		11409	31982521	NM_007383.2	Acads	NP_031409.2	ILMN_1256725	005810372	S	1014	CCCGCCTGCTGACCTGGCGTGCTGCCATGTTGAAAGACAACAAGAAACCT	5	-	115561336-115561385	5qF	Mus musculus acyl-Coenzyme A dehydrogenase, short chain (Acads), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]; Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor [goid 3995] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: butanoyl-CoA + ETF = 2-butenoyl-CoA + reduced ETF [goid 4085] [evidence IEA]	SCAD; Bcd-1; AI196007; Bcd1	SCAD; Bcd-1; AI196007; Bcd1
Mus musculus	RefSeq	ILMN_218472	ILMN_218472	PNKP	NM_021549.2	NM_021549.2		59047	118601008	NM_021549.2	Pnkp	NP_067524.2	ILMN_2719620	006130360	S	1737	AGGAGCATCTGGACCCGGCACTGCAGCGACTGTACCGCCAGTTTTCCGAG	7	+	52117937-52117986	7qB4	Mus musculus polynucleotide kinase 3'- phosphatase (Pnkp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 5'-dephospho-DNA = ADP + 5'-phospho-DNA [goid 46404] [evidence IEA]; Catalysis of the reaction: 3'-phosphopolynucleotide + H2O = a polynucleotide + phosphate. Hydrolyzes the free 3'-phosphate resulting from single strand breaks in DNA due to oxidative damage [goid 46403] [evidence IEA]	PNK; 1810009G08Rik	PNK; 1810009G08Rik
Mus musculus	RefSeq	ILMN_218472	ILMN_218472	PNKP	NM_021549.2	NM_021549.2		59047	118601008	NM_021549.2	Pnkp	NP_067524.2	ILMN_2696270	003400286	S	1460	AGGCAGGGGAAGCGAGTCGTGATTGACAACACCAACCCAGATGTCCCAAG	7	+	52117070-52117119	7qB4	Mus musculus polynucleotide kinase 3'- phosphatase (Pnkp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 5'-dephospho-DNA = ADP + 5'-phospho-DNA [goid 46404] [evidence IEA]; Catalysis of the reaction: 3'-phosphopolynucleotide + H2O = a polynucleotide + phosphate. Hydrolyzes the free 3'-phosphate resulting from single strand breaks in DNA due to oxidative damage [goid 46403] [evidence IEA]	PNK; 1810009G08Rik	PNK; 1810009G08Rik
Mus musculus	Riken	ILMN_206613	ILMN_206613	E330003N13RIK	ri|E330003N13|PX00210J16|AK087678|2083					AK087678	E330003N13Rik		ILMN_1241740	005260088	S	749	TGTGGGTTGGCTGGGGAAATTGGAGGCTTCTTAAACCAACTGGAGCCCAA										
Mus musculus	MEEBO	ILMN_184932	ILMN_184932	PCDH11X	scl0245578.1_146				51772344	XM_142105	Pcdh11x		ILMN_2422791	007510228	S	18	GCGGCACCCACTAACAACGTAAATCAGGGAGAGCAGGGGGGTCTAGTACA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_215232	ILMN_215232	RAB17	NM_008998.2	NM_008998.2		19329	31543562	NM_008998.2	Rab17	NP_033024.1	ILMN_2752489	002850349	S	651	TCTACTTCAGGGGTGCCAATGCTGCGCTCCTGGTTTATGACATCACTCGG	1	-	92791519-92791568	1qD	Mus musculus RAB17, member RAS oncogene family (Rab17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	AW413472	AW413472
Mus musculus	RefSeq	ILMN_223843	ILMN_239099	SLC35A2	NM_078484.2	NM_078484.2		22232	145279182	NM_078484.2	Slc35a2	NP_511039.2	ILMN_2770278	003360072	S	1328	CCTGGCCCAACTGGGACTAAACTCTTATCAGTATTAGGGGTAGGGTGAGG				XqA1.1	Mus musculus solute carrier family 35 (UDP-galactose transporter), member A2 (Slc35a2), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IDA]	The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IMP]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]; Catalysis of the transfer of a UDP-galactose from one side of the membrane to the other. UDP-galactose is a substance composed of galactose in glycosidic linkage with uridine diphosphate [goid 5459] [evidence IDA]; Catalysis of the transfer of a UDP-galactose from one side of the membrane to the other. UDP-galactose is a substance composed of galactose in glycosidic linkage with uridine diphosphate [goid 5459] [evidence IMP]	Ugalt; UGT; Sfc8; Had1; Had-1; AI327289	Ugalt; UGT; Sfc8; Had1; Had-1; AI327289
Mus musculus	RefSeq	ILMN_197879	ILMN_197879	LOC230896	XM_124427.4	XM_124427.4			38079099	XM_124427.4	LOC230896		ILMN_2529682	000110463	S	345	AACCAAGGCAGGGGCCAAAGCTCCAACTAAGGCCCAGGCTTCAGACCCAG										
Mus musculus	Riken	ILMN_202271	ILMN_202271	2210017A09RIK	ri|2210017A09|ZX00053P23|AK008741|1411					AK008741	2210017A09Rik		ILMN_2548302	007100142	S	1095	CTGCTGACTAGCCTGGACTGCTCCAAAGGTTCAATTGTTCACAGCGATGC										
Mus musculus	RefSeq	ILMN_201005	ILMN_320058	NLRP12	XM_001476888.1	XM_001476888.1		378425	149256092	XM_001476888.1	Nlrp12	XP_001476938.1	ILMN_1243089	003800255	S	3711	CCATGGACCAAGACTGCCATCTACTGGCCAAGTCACAGCATAAAGACCCA	7	-	3222079-3222128	7qA1	PREDICTED: Mus musculus NLR family, pyrin domain containing 12 (Nlrp12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I [goid 45345] [evidence ISO]; Any process that modulates an I-kappaB kinase/NF-kappaB induced cascade [goid 43122] [evidence ISO]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence ISO]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Mus musculus	RefSeq	ILMN_244389	ILMN_244389	OLFR685	NM_001011857.1	NM_001011857.1		258160	58801471	NM_001011857.1	Olfr685	NP_001011857.1	ILMN_3161860	000650008	S	616	GCACTGCTGGTGGTAGGACTAGATGTCCTGGCCATTGGCATTTCCTATGC	7	-	112329160-112329209	7qE3	Mus musculus olfactory receptor 685 (Olfr685), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR37-1	MOR37-1
Mus musculus	MEEBO	ILMN_189823	ILMN_189823	SCL0002182.1_22	scl0002182.1_22	BC021514.1			18204412	BC021514.1	scl0002182.1_22		ILMN_2464689	002260681	S	15	GGTCCAGCGTCCCCAGAGAAGAGCATAGAAGGGTCCTCAGAGAGCAGTGA										
Mus musculus	Riken	ILMN_204390	ILMN_204390	A130017C09RIK	ri|A130017C09|PX00120L12|AK037420|1967					AK037420	A130017C09Rik		ILMN_1220007	000160139	S	1842	TGGCCATGATGATGTGTGCTTTTAATCCCAGTGCTCAGGGCTCCTTGGTC										
Mus musculus	RefSeq	ILMN_243423	ILMN_243423	HS2ST1	NM_011828.2	NM_011828.2		23908	31542964	NM_011828.2	Hs2st1	NP_035958.2	ILMN_2853601	004560600	S	4597	GTGTCCTGTTGGAAACCCCTAAAATTGTCTGCTCCATCAGGGAACTTACC	3	-	144094157-144094206	3qH2	Mus musculus heparan sulfate 2-O-sulfotransferase 1 (Hs2st1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan [goid 15014] [evidence IMP]; The chemical reactions and pathways involving heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells. They are similar to heparan sulfates but are of somewhat higher average Mr (6000-20000) and contain fewer N-acetyl groups and more N-sulfate and O-sulfate groups; they may be attached in the same manner to protein, forming proteoglycans. They consist predominantly of alternating alpha1->4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 30202] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + heparan sulfate = adenosine 3',5'-bisphosphate + heparan sulfate 2-O-sulfate; results in 2-O-sulfation of iduronic acid residues in heparan sulfate [goid 4394] [evidence IMP]	AW214369; Hs2st; mKIAA0448	AW214369; Hs2st; mKIAA0448
Mus musculus	MEEBO	ILMN_224253	ILMN_224253	SERPINH1	scl012406.1_153				6753303	NM_009825	Serpinh1		ILMN_2777359	000730706	S	2018	GGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTC						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32964] [evidence IMP]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IMP]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [evidence IMP]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an unfolded protein [goid 51082] [evidence IDA]		
Mus musculus	RefSeq	ILMN_218673	ILMN_218673	DCAKD	NM_026551.3	NM_026551.3		68087	142370255	NM_026551.3	Dcakd	NP_080827.2	ILMN_2698843	000060670	S	1612	TTGGGTTCTCCCAGACTGTACGCCTCTAGATGGCAGGGCCGATTCATCTC	11	-	102855422-102855471	11qE1	Mus musculus dephospho-CoA kinase domain containing (Dcakd), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	6720485C15Rik; FLJ22955; 3010024O21Rik; RP23-463E7.9; AI849483	6720485C15Rik; FLJ22955; 3010024O21Rik; RP23-463E7.9; AI849483
Mus musculus	Riken	ILMN_205937	ILMN_205937	C130054H24RIK	ri|C130054H24|PX00169J10|AK048383|3479					AK048383	C130054H24Rik		ILMN_2576317	003140026	S	3420	GCCATTCTGGCCTACACAGGAAAACCCTGTCTCAAAACTCAAGTGAAAGG										
Mus musculus	RefSeq	ILMN_242789	ILMN_242789	BC051665	NM_199148.1	NM_199148.1		218275	40255290	NM_199148.1	BC051665	NP_954599.1	ILMN_2910076	001710364	S	1024	AACTGTGGGATTGCTACCTATGCCATCTACCCCACCGTGTGAGCTGCCCG	13	-	60883507-60883515:60883516-60883556	13qB2	Mus musculus cDNA sequence BC051665 (BC051665), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	MGC60730	MGC60730
Mus musculus	RefSeq	ILMN_216357	ILMN_216357	OAS2	NM_145227.1	NM_145227.1		246728	21644596	NM_145227.1	Oas2	NP_660262.1	ILMN_2670150	003060450	S	3683	GCCGAGTGATGGAACCCGACATCCCTAGGTGCTAAGGCCCCACCAAATTC	5	-	121180506-121180555	5qF	Mus musculus 2'-5' oligoadenylate synthetase 2 (Oas2), mRNA.		The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 6401] [evidence IDA]	Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. Requires binding of double-stranded RNA [goid 1730] [evidence IDA]	Oasl11	Oasl11
Mus musculus	RefSeq	ILMN_193624	ILMN_240279	PAPOLA	NM_011112.2	NM_011112.2		18789	115511060	NM_011112.2	Papola	NP_035242.1	ILMN_1220725	005720059	S	478	AAATGTTGGAGGGAAGATTTTTACATTTGGATCTTACAGACTAGGAGTCC	12	+	107043160-107043209	12qE-qF1	Mus musculus poly (A) polymerase alpha (Papola), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The enzymatic addition of a sequence of adenylyl residues at the 3' end of an RNA molecule [goid 43631] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group [goid 4652] [evidence IEA]	Plap; PAP; PapIII	Plap; PAP; PapIII
Mus musculus	RefSeq	ILMN_193624	ILMN_240279	PAPOLA	NM_011112.2	NM_011112.2		18789	115511060	NM_011112.2	Papola	NP_035242.1	ILMN_2602011	004610551	S	2039	GTCTCCAGAGTTGTCTCCTCAACACGACTGGTAAACCCATCGCCTAGACC	12	+	107067335-107067384	12qE-qF1	Mus musculus poly (A) polymerase alpha (Papola), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The enzymatic addition of a sequence of adenylyl residues at the 3' end of an RNA molecule [goid 43631] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group [goid 4652] [evidence IEA]	Plap; PAP; PapIII	Plap; PAP; PapIII
Mus musculus	RefSeq	ILMN_193624	ILMN_240279	PAPOLA	NM_011112.2	NM_011112.2		18789	115511060	NM_011112.2	Papola	NP_035242.1	ILMN_2498909	003840307	S	3063	GGACACTGAAAGAAGAATTAGGCGATACTTGGTTTTGATGAGGTTATGAT	12	+	107075708-107075757	12qE-qF1	Mus musculus poly (A) polymerase alpha (Papola), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The enzymatic addition of a sequence of adenylyl residues at the 3' end of an RNA molecule [goid 43631] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group [goid 4652] [evidence IEA]	Plap; PAP; PapIII	Plap; PAP; PapIII
Mus musculus	Riken	ILMN_202674	ILMN_202674	D730042P09RIK	ri|D730042P09|PX00091I15|AK021335|776					AK021335	D730042P09Rik		ILMN_1246759	006960768	S	576	CACTCGGCCTGTCACAGTCAGTGAGGAAAAGTGCCCTGACCATCACCTGT										
Mus musculus	RefSeq	ILMN_223417	ILMN_223417	RG9MTD3	NM_027266.4	NM_027266.4		69934	146149317	NM_027266.4	Rg9mtd3	NP_081542.2	ILMN_2763812	000130403	S	1523	GAGGGCTCCTCTCCTCTAGTCTTTGTAAATAGCTTTGTGTAGCCTTGAGC				4qB1	Mus musculus RNA (guanine-9-) methyltransferase domain containing 3 (Rg9mtd3), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	2610042J10Rik; Rnmtd3	2610042J10Rik; Rnmtd3
Mus musculus	MEEBO	ILMN_194210	ILMN_194210	SLC1A5	scl000026.1_9	NM_009201.1			6678004	NM_009201.1	Slc1a5		ILMN_1252970	002810138	S	568	ATCCAGAGAGGACCAGAGTGCGAAAGCAGGTGGTTGCTGCGGTTCCCGTG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [evidence IDA]		
Mus musculus	RefSeq	ILMN_209806	ILMN_209806	4732471D19RIK	NM_176987.3	NM_176987.3		319719	88196777	NM_176987.3	4732471D19Rik	NP_795961.2	ILMN_2599392	003390608	S	2880	CTTCTGCACAATCCATCAGTGTTACACTGGTCAAGATACTGACGGCCCGC	13	+	54652305-54652354	13qB1	Mus musculus RIKEN cDNA 4732471D19 gene (4732471D19Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216130	ILMN_216130	RPTN	NM_009100.2	NM_009100.2		20129	112421059	NM_009100.2	Rptn	NP_033126.2	ILMN_2740559	002230288	S	3854	CCACAAGCTTCATGGTCTAGACTTGGATGAAACAGTGAGAAGCCCCTAGG	3	+	93203072-93203121	3qF2.1	Mus musculus repetin (Rptn), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_216130	ILMN_216130	RPTN	NM_009100.2	NM_009100.2		20129	112421059	NM_009100.2	Rptn	NP_033126.2	ILMN_2667665	002690609	S	3950	GCCTAGGCTCCTCTTCCTCCATTGATGGGTCATGAGAATTGACCAGACCT	3	+	93203168-93203217	3qF2.1	Mus musculus repetin (Rptn), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IDA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	Riken	ILMN_201741	ILMN_201741	EIF2S3Y	ri|2610529D04|ZX00045D20|AK012186|991					AK012186	Eif2s3y		ILMN_1215914	001400678	S	623	CCATGGGGTTTAAATGCATATCATCAGGCTTGGCAGCAAGTGCTCTTAGC							The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210471	ILMN_210471	GNPAT	NM_010322.2	NM_010322.2		14712	31981733	NM_010322.2	Gnpat	NP_034452.2	ILMN_2605941	005390669	S	2468	TACTGCCACTCAGATTCCCACACCTACCCCACTCTCAGGCTGACCTCCGA	8	+	127413495-127413544	8qE2	Mus musculus glyceronephosphate O-acyltransferase (Gnpat), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The material contained within the membrane of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase [goid 5782] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IMP]; The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol [goid 8611] [evidence TAS]; The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol [goid 8611] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acyl-CoA + glycerone phosphate = CoA + acylglycerone phosphate [goid 16287] [evidence IDA]; Catalysis of the reaction: acyl-CoA + glycerone phosphate = CoA + acylglycerone phosphate [goid 16287] [evidence IMP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU019525; DAPAT; DHAPAT; D1Ertd819e	AU019525; DAPAT; DHAPAT; D1Ertd819e
Mus musculus	RefSeq	ILMN_209167	ILMN_209167	LYST	NM_010748.2	NM_010748.2		17101	111955375	NM_010748.2	Lyst	NP_034878.2	ILMN_2686361	003840138	S	3798	AACTTCTGGGTGAGGAAGAAGGCTATGAAGCGGATAGTGAAAGCAATCCT	13	+	13733416-13733465	13qA1	Mus musculus lysosomal trafficking regulator (Lyst), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IMP]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IMP]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IMP]; Reactions triggered in response to the presence of a protozoan that act to protect the cell or organism [goid 42832] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a secretory granule in a mast cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion [goid 33364] [evidence IMP]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]		D13Sfk13; bg; beige	D13Sfk13; bg; beige
Mus musculus	RefSeq	ILMN_220762	ILMN_220762	CUGBP1	NM_017368.2	NM_017368.2		13046	38570085	NM_017368.2	Cugbp1	NP_059064.2	ILMN_2726496	005050768	S	259	GAGGTGATGGCTGCGTTTAAGTTGGATTTCCTTCCAGAAATGATGGTGGA	2	+	90827896-90827902:90827903-90827945	2qE1	Mus musculus CUG triplet repeat, RNA binding protein 1 (Cugbp1), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	CUGBP; NAB50; HNAB50; D2Wsu101e; Brunol2; CUG-BP; 1600010O03Rik; AA407467; CUG-BP1	CUGBP; NAB50; HNAB50; D2Wsu101e; Brunol2; CUG-BP; 1600010O03Rik; AA407467; CUG-BP1
Mus musculus	RefSeq	ILMN_210571	ILMN_210571	CCNA1	NM_007628.1	NM_007628.1		12427	6680863	NM_007628.1	Ccna1	NP_031654.1	ILMN_2837631	003310541	S	1265	CATGCCTCAGTATCCCCCATCGACCGCAGCAAGCAATCAGGGAGAAGTAC	3	-	55133907-55133956	3qC	Mus musculus cyclin A1 (Ccna1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MGC159139	MGC159139
Mus musculus	RefSeq	ILMN_184740	ILMN_240427	RHOBTB1	NM_001081347.1	NM_001081347.1		69288	124486808	NM_001081347.1	Rhobtb1	NP_001074816.1	ILMN_2421179	002850674	S	4210	CAAGTGGCTGGTTCATTTGGTTGACACTGATCCGCCTTTAACCACGATGG	10	+	68754420-68754469	10qB5.3	Mus musculus Rho-related BTB domain containing 1 (Rhobtb1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI173445; 3110048G13Rik; 1700008H16Rik; AI573858; MGC107538; AV350930	AI173445; 3110048G13Rik; 1700008H16Rik; AI573858; MGC107538; AV350930
Mus musculus	RefSeq	ILMN_184740	ILMN_240427	RHOBTB1	NM_001081347.1	NM_001081347.1		69288	124486808	NM_001081347.1	Rhobtb1	NP_001074816.1	ILMN_1252902	004890086	S	2180	TCAAGGAGAAAGTGGTGTTTCTGGCATTCGTCCCCAGCTGTCGCCTGAGG	10	+	68752390-68752437:68752438-68752439	10qB5.3	Mus musculus Rho-related BTB domain containing 1 (Rhobtb1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI173445; 3110048G13Rik; 1700008H16Rik; AI573858; MGC107538; AV350930	AI173445; 3110048G13Rik; 1700008H16Rik; AI573858; MGC107538; AV350930
Mus musculus	RefSeq	ILMN_199418	ILMN_199418	OLFR470	NM_146425.1	NM_146425.1		258417	33239109	NM_146425.1	Olfr470	NP_666636.1	ILMN_2610406	000430070	S	767	GAACTGTCACATTCATTTATGTGATGCCCAAATCCAGCTACTCCACGGAC	7	-	114988429-114988478	7qE3	Mus musculus olfactory receptor 470 (Olfr470), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-22	MOR204-22
Mus musculus	RefSeq	ILMN_221180	ILMN_221180	EXT1	NM_010162.2	NM_010162.2		14042	112807208	NM_010162.2	Ext1	NP_034292.2	ILMN_2731989	003370487	S	2965	GCCGCTGATCCATTCTCAGATGAGGCTGGACCCGGTCCTCTTTAAAGACC	15	-	52900265-52900314	15qC	Mus musculus exostoses (multiple) 1 (Ext1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IMP]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IMP]; The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence IDA]; Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50509] [evidence IDA]	AA409028	AA409028
Mus musculus	RefSeq	ILMN_244571	ILMN_244571	TAPBP	NM_001025313.1	NM_001025313.1		21356	70778973	NM_001025313.1	Tapbp	NP_001020484.1	ILMN_3155492	003140386	A	2040	GGTGCTGGGATTAAAGGCGTGCGCCACCACCGCTGGACTCGAACTAAACT	17	+	34062628-34062677	17qB1	Mus musculus TAP binding protein (Tapbp), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded [goid 50823] [evidence IMP]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class I molecule. Class I here refers to classical class I molecules [goid 2479] [evidence IDA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]		D17Wsu91e; TPN	D17Wsu91e; TPN
Mus musculus	RefSeq	ILMN_223320	ILMN_223320	PRKACA	NM_008854.3	NM_008854.3		18747	24475738	NM_008854.3	Prkaca	NP_032880.1	ILMN_2833378	004890491	S	2010	GTCCCCACTCACTGCAACCCCAAGTCTGATTGTGCTTTTTCTCTCAATAG	8	+	86520071-86520120	8qC3	Mus musculus protein kinase, cAMP dependent, catalytic, alpha (Prkaca), mRNA.	The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IGI]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm [goid 46827] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cAMP [goid 4691] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PKA; Pkaca; PKCD; Cs	PKA; Pkaca; PKCD; Cs
Mus musculus	RefSeq	ILMN_223320	ILMN_223320	PRKACA	NM_008854.3	NM_008854.3		18747	24475738	NM_008854.3	Prkaca	NP_032880.1	ILMN_2833376	005690427	S	2107	ATCCCTCTCGTAACTTCTCCCAAAAAGGAGGAGCTCTCAGGCCTGGGTGG	8	+	86520168-86520217	8qC3	Mus musculus protein kinase, cAMP dependent, catalytic, alpha (Prkaca), mRNA.	The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IGI]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm [goid 46827] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cAMP [goid 4691] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PKA; Pkaca; PKCD; Cs	PKA; Pkaca; PKCD; Cs
Mus musculus	RefSeq	ILMN_221276	ILMN_221276	SEC1	NM_019934.2	NM_019934.2		56546	148277015	NM_019934.2	Sec1	NP_064318.2	ILMN_2733335	003780678	S	971	ACACGGTTTTCAAGCCAGAAGCAGCTTACCTGCCCGAGTGGGTGGGCATC				7qB4	Mus musculus secretory blood group 1 (Sec1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IDA]; Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-R = GDP + alpha-L-fucosyl-(1,2)-beta-D-galactosyl-R [goid 8107] [evidence IDA]	Fut10; Fut3	Fut10; Fut3
Mus musculus	RefSeq	ILMN_209038	ILMN_209038	MLLT11	NM_019914.3	NM_019914.3		56772	141803083	NM_019914.3	Mllt11	NP_064298.1	ILMN_1221429	007210440	S	1325	CAGTTATGTTCAGACCCTACCCGTCCCCATTCCTTCCAAAGCTATTGCAG	3	-	95023109-95023158	3qF2.1	Mus musculus myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 (Mllt11), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Zfp692; AI839562; Af1q	Zfp692; AI839562; Af1q
Mus musculus	RefSeq	ILMN_210914	ILMN_210914	PLA2G1B	NM_011107.1	NM_011107.1		18778	6755089	NM_011107.1	Pla2g1b	NP_035237.1	ILMN_2845906	007210093	S	367	TTCATCTGCAACTGTGACCGTGAGGCCGCCATCTGCTTCTCCAAGGTCCC	5	+	115924541-115924590	5qF	Mus musculus phospholipase A2, group IB, pancreas (Pla2g1b), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IDA]	sPLA2IB; MGC6679; Pla2a	sPLA2IB; MGC6679; Pla2a
Mus musculus	RefSeq	ILMN_221548	ILMN_329051	1500011K16RIK	XR_035441.1	XR_035441.1		67885	149250286	XR_035441.1	1500011K16Rik		ILMN_1212605	000070114	S	219	TTCTCACTCCCTAAGCCCAACGCAGCCCGGATCGTGGGAGCCGCGCGACC	2	-	127624871-127624920	2qF1	PREDICTED: Mus musculus RIKEN cDNA 1500011K16 gene (1500011K16Rik), misc RNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_188708	ILMN_211143	C1QL3	NM_153155.2	NM_153155.2		227580	109689714	NM_153155.2	C1ql3	NP_694795.1	ILMN_1227567	006020079	S	2876	GCAAGCAAGGGATTAAAGATTTGTCTTGGGTACCAAATCACATAACGAGG	2	-	12923751-12923800	2qA1	Mus musculus C1q-like 3 (C1ql3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI661623; C1ql; 1110065A22Rik; K100	AI661623; C1ql; 1110065A22Rik; K100
Mus musculus	Riken	ILMN_202970	ILMN_202970	A430006M23RIK	ri|A430006M23|PX00134I21|AK079675|1196					AK079675	A430006M23Rik		ILMN_1216860	000150209	S	879	AGGATCTGATACCCTCATCTGGCCTCCACGAACACCAGGCACTCACGTGG										
Mus musculus	RefSeq	ILMN_221238	ILMN_312039	B330016D10RIK	XR_035407.1	XR_035407.1		320456	149253192	XR_035407.1	B330016D10Rik		ILMN_2732873	002120563	S	1621	CTGTGTCTTTAAGATTACATAAATAGTCTGAAACCTTTAGTAGTGATTAC	4	+	141103697-141103746	4qE1	PREDICTED: Mus musculus RIKEN cDNA B330016D10 gene (B330016D10Rik), misc RNA.					
Mus musculus	MEEBO	ILMN_217848	ILMN_217848	H2AFV	scl40538.6.1_45	XM_126043.3			38091295	XM_126043.3	H2afv		ILMN_2688345	006520446	S	605	TGTAACAGGGCAGAGGGGACTAGTGCGGTGTGCGGAAGAGCATAGACGGT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185360	ILMN_185360	HRB	scl17741.2.745_28				33563259	NM_010472	Hrb		ILMN_1258961	006770139	S	1	GACATGCTGAGGTCTTTGAGGCTCAGTTTTGGTGCAGGAAGTGGTTTTAG										
Mus musculus	RefSeq	ILMN_209166	ILMN_209166	PKD2L2	NM_016927.1	NM_016927.1		53871	8393964	NM_016927.1	Pkd2l2	NP_058623.1	ILMN_2593159	006100128	S	2172	CTTGCCTACTGGAACCACAAACAAGCACACAATGGGACTCTCTGAGTGCC	18	+	34567301-34567350	18qB1	Mus musculus polycystic kidney disease 2-like 2 (Pkd2l2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	TRPP5	TRPP5
Mus musculus	RefSeq	ILMN_209148	ILMN_259627	GPR6	NM_199058.1	NM_199058.1		140741	39979619	NM_199058.1	Gpr6	NP_951013.1	ILMN_2592996	000070767	S	857	TAGGCACTTTTGGGGCCAGCTGGCTGCCCTTCGCCATCTATTGTGTGGTG	10	-	40790484-40790533	10qB1	Mus musculus G protein-coupled receptor 6 (Gpr6), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AI852874; Gm233	AI852874; Gm233
Mus musculus	Riken	ILMN_203845	ILMN_203845	A530018G09RIK	ri|A530018G09|PX00140L23|AK040709|1214					AK040709	A530018G09Rik		ILMN_1240882	002450079	S	873	GGCAGGCCAAGCTGACCCTCACACGTGGTATATGGCCGCTCTTTCCAACT										
Mus musculus	RefSeq	ILMN_191471	ILMN_191471	TNMD	NM_022322.2	NM_022322.2		64103	31981227	NM_022322.2	Tnmd	NP_071717.1	ILMN_1243429	006900037	S	841	GGGGATTGACCAGAATGAGCAATGGGTGGTCCCGCAAGTGAAGGTGGAGA	X	+	130399327-130399376	XqE3	Mus musculus tenomodulin (Tnmd), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			tendin; 1110017I01Rik; ChM1L	tendin; 1110017I01Rik; ChM1L
Mus musculus	MEEBO	ILMN_216772	ILMN_216772	MUC4	scl0140474.33_123	NM_080457.1			23956251	NM_080457.1	Muc4		ILMN_2771870	000010736	S	9391	ACCTTTGGCCGCTTGTGTGAACGCTCCAAGGACCCGTGTGATGAGCCATG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216772	ILMN_216772	MUC4	scl0140474.33_123	NM_080457.1			23956251	NM_080457.1	Muc4		ILMN_2771869	006580609	S	9390	CACCTTTGGCCGCTTGTGTGAACGCTCCAAGGACCCGTGTGATGAGCCAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_204474	ILMN_204474	NIPSNAP1	ri|B130009H12|PX00157I10|AK044874|1387					AK044874	Nipsnap1		ILMN_2565257	007000543	S	1152	GTGTACCTTGTAAACTCAGCCTTTTCTGGAGGGATGACCTTGGGTAGGAG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_202553	ILMN_202553	4930408K08RIK	ri|4930408K08|PX00029F24|AK015112|1437					AK015112	4930408K08Rik		ILMN_1229279	004850463	S	922	GATAGATTTTCCAACCCCTGACACTTGGGGGAGGGGGAAGTGTGTGACAC										
Mus musculus	Riken	ILMN_204586	ILMN_204586	MSX1	ri|C130034M15|PX00168P16|AK081534|1885					AK081534	Msx1		ILMN_1215278	006760458	S	1744	CTGGTGGAAAACGACTCTGGGGCCAACTTCCCGGACTTGCTATGGCCTGA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]		
Mus musculus	RefSeq	ILMN_213249	ILMN_213249	ASPN	NM_025711.2	NM_025711.2		66695	27754117	NM_025711.2	Aspn	NP_079987.2	ILMN_1231476	003180537	S	1817	GCTTCAAGTATTCACAGATAATATTCATCAGAGTTGGTTTGGGCTATAAC	13	+	49662495-49662544	13qA5	Mus musculus asporin (Aspn), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PLAP1; AA986886; 4631401G09Rik; SLRR1C	PLAP1; AA986886; 4631401G09Rik; SLRR1C
Mus musculus	RefSeq	ILMN_234088	ILMN_234088	POFUT1	NM_001039055.1	NM_001039055.1		140484	84794594	NM_001039055.1	Pofut1	NP_001034144.1	ILMN_3132204	005340703	A	7035	ACTCTTCCATTACCCGTGCCGGGGGGTGGGCTAGAAGAGAGATTGAACCC	2	+	153095914-153095963	2qH1	Mus musculus protein O-fucosyltransferase 1 (Pofut1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence ISS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence ISS]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose [goid 6004] [evidence TAS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]	Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence ISO]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an alpha-L-fucosyl residue from GDP- beta-L-fucose to the serine hydroxy group of a protein acceptor [goid 46922] [evidence IEA]	mKIAA0180; O-FucT-1; KIAA0180	mKIAA0180; O-FucT-1; KIAA0180
Mus musculus	RefSeq	ILMN_234088	ILMN_234088	POFUT1	NM_001039055.1	NM_001039055.1		140484	84794594	NM_001039055.1	Pofut1	NP_001034144.1	ILMN_3055425	007400170	I	2056	GGAGTGGCAGCAGGGCTCTTTTTGCGTCCTGTCTGACTTCCCCTTGTTCC	2	+	153085273-153085322	2qH1	Mus musculus protein O-fucosyltransferase 1 (Pofut1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence ISS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence ISS]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose [goid 6004] [evidence TAS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]	Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence ISO]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an alpha-L-fucosyl residue from GDP- beta-L-fucose to the serine hydroxy group of a protein acceptor [goid 46922] [evidence IEA]	mKIAA0180; O-FucT-1; KIAA0180	mKIAA0180; O-FucT-1; KIAA0180
Mus musculus	RefSeq	ILMN_209803	ILMN_234088	POFUT1	NM_001039055.1	NM_001039055.1		140484	84794594	NM_001039055.1	Pofut1	NP_001034144.1	ILMN_2599360	001820632	S	3905	TGGGCTCTCGTCTGTGGCAAGCACTGTACTCTTTGACCCCGTTTCTCCCC	2	+	153092784-153092833	2qH1	Mus musculus protein O-fucosyltransferase 1 (Pofut1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence ISS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence ISS]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose [goid 6004] [evidence TAS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]	Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence ISO]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an alpha-L-fucosyl residue from GDP- beta-L-fucose to the serine hydroxy group of a protein acceptor [goid 46922] [evidence IEA]	mKIAA0180; O-FucT-1; KIAA0180	mKIAA0180; O-FucT-1; KIAA0180
Mus musculus	RefSeq	ILMN_233739	ILMN_233739	ZCCHC18	NM_001035510.1	NM_001035510.1		66995	78482620	NM_001035510.1	Zcchc18	NP_001030587.1	ILMN_3117759	004230161	A	3202	TATGAGCCTACAGAGGCCAGAAGATGATGTCAGATCCCGTGTACCTGGAG	X	+	133531337-133531386	XqF1	Mus musculus zinc finger, CCHC domain containing 18 (Zcchc18), transcript variant 1, mRNA.				1500031H04Rik; Sizn2	1500031H04Rik; Sizn2
Mus musculus	RefSeq	ILMN_233739	ILMN_233739	ZCCHC18	NM_001035510.1	NM_001035510.1		66995	78482620	NM_001035510.1	Zcchc18	NP_001030587.1	ILMN_3042991	000940390	I	625	CCGGGTGAAATGGATTGGGGGAGGGGTGGTCCCCATTGGCTTTTATTCTG	X	+	133528318-133528367	XqF1	Mus musculus zinc finger, CCHC domain containing 18 (Zcchc18), transcript variant 1, mRNA.				1500031H04Rik; Sizn2	1500031H04Rik; Sizn2
Mus musculus	RefSeq	ILMN_211604	ILMN_211604	2310057M21RIK	NM_026655.3	NM_026655.3		68277	142374062	NM_026655.3	2310057M21Rik	NP_080931.1	ILMN_2617592	002810671	S	1676	TGTGTTTGAAGTGGATTTTTTATTTATACAGATACCTGTAAAATATATAG	7	-	138486720-138486769	7qF3	Mus musculus RIKEN cDNA 2310057M21 gene (2310057M21Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	3110040E10Rik; AI429544	3110040E10Rik; AI429544
Mus musculus	MEEBO	ILMN_196160	ILMN_196160	C77604	scl26989.6.1_126				51711445	XM_487903	C77604		ILMN_2522145	006290563	S	4	TCAGAGTGGTGCTCAGAGAAAAGACCCAGGGGGGGAAGCATGAGCTGTAC										
Mus musculus	RefSeq	ILMN_185138	ILMN_243667	WDFY3	NM_172882.2	NM_172882.2		72145	39930598	NM_172882.2	Wdfy3	NP_766470.2	ILMN_2488343	001740220	S	11533	ACTTCAAACTAAGCCACTAACTCAATGAACCATCTAAGGTCTGTCTAACG	5	-	102264666-102264715	5qE4-qE5	Mus musculus WD repeat and FYVE domain containing 3 (Wdfy3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 44444] [evidence ISA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence ISA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IDA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence ISO]	ALFY; mKIAA0993; D5Ertd66e; Ggtb3; 2610509D04Rik; B930017C24; ZFYVE25; AW319683; BWF1; Bchs	ALFY; mKIAA0993; D5Ertd66e; Ggtb3; 2610509D04Rik; B930017C24; ZFYVE25; AW319683; BWF1; Bchs
Mus musculus	RefSeq	ILMN_243667	ILMN_243667	WDFY3	NM_172882.2	NM_172882.2		72145	39930598	NM_172882.2	Wdfy3	NP_766470.2	ILMN_2826414	002510292	S	11180	GGAAGTGCTGAGTGTAAAGGAATCATTGGATCACGGCTTCCGAGGCCAGT	5	-	102265019-102265068	5qE4-qE5	Mus musculus WD repeat and FYVE domain containing 3 (Wdfy3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 44444] [evidence ISA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence ISA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IDA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence ISO]	ALFY; mKIAA0993; D5Ertd66e; Ggtb3; 2610509D04Rik; B930017C24; ZFYVE25; AW319683; BWF1; Bchs	ALFY; mKIAA0993; D5Ertd66e; Ggtb3; 2610509D04Rik; B930017C24; ZFYVE25; AW319683; BWF1; Bchs
Mus musculus	RefSeq	ILMN_185138	ILMN_243667	WDFY3	NM_172882.2	NM_172882.2		72145	39930598	NM_172882.2	Wdfy3	NP_766470.2	ILMN_2460122	006250050	S	9005	CAACATGGCGGATGTGAAGGAACTTATCCCAGAATTCTTTTACTTACCAG	5	-	102287516-102287565	5qE4-qE5	Mus musculus WD repeat and FYVE domain containing 3 (Wdfy3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 44444] [evidence ISA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence ISA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence ISA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IDA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence ISO]	ALFY; mKIAA0993; D5Ertd66e; Ggtb3; 2610509D04Rik; B930017C24; ZFYVE25; AW319683; BWF1; Bchs	ALFY; mKIAA0993; D5Ertd66e; Ggtb3; 2610509D04Rik; B930017C24; ZFYVE25; AW319683; BWF1; Bchs
Mus musculus	RefSeq	ILMN_196986	ILMN_196986	LOC230765	XM_124355.4	XM_124355.4			38050554	XM_124355.4	LOC230765		ILMN_2526498	005490040	S	872	CCATGCTGATGCTGGGAGGAGGTGGCTACACCATCCGGAAATGTCGCTCG										
Mus musculus	Riken	ILMN_207255	ILMN_207255	F830048M02RIK	ri|F830048M02|PL00007H07|AK089907|1884					AK089907	F830048M02Rik		ILMN_2586214	004540491	S	1821	GGTGGAAGAGGAGGTGGAAGGAAGATGGAGCAGAATCATATGGCCTGGAG										
Mus musculus	Riken	ILMN_204459	ILMN_204459	JCAM2	ri|B130032E13|PX00157D10|AK045095|1999					AK045095	Jcam2		ILMN_1258831	003120671	S	1738	CTCCACAACCTCTTCGAAAACATCAAGAGCTGGAGACCAAGTGTTCAGAC										
Mus musculus	Riken	ILMN_206520	ILMN_206520	YM24D07	ri|D830031P22|PX00199L01|AK085938|680					AK085938	Ym24d07		ILMN_1246241	003130431	S	285	GAGTCCTCACCCTGCATCAAGGAAACTTCTCTTTGCCGTAGATGGAGACC										
Mus musculus	RefSeq	ILMN_216085	ILMN_250709	SGSH	NM_018822.3	NM_018822.3		27029	115270982	NM_018822.3	Sgsh	NP_061292.2	ILMN_2757986	000580022	S	2696	AGCTGCTAACAGCCAAGTGCTGCCACAGACATCTGCAAATGAAGGTGCTG	11	-	119206381-119206430	11qE2	Mus musculus N-sulfoglucosamine sulfohydrolase (sulfamidase) (Sgsh), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	The chemical reactions and pathways involving any proteoglycan containing heparan sulfate, any member of a group of glycosaminoglycans that have repeat units consisting of alternating alpha1->4 linked hexuronic acid and glucosamine residues, the former being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids, and the latter being either sulfated or acetylated on its amino group as well as sulfated on one of its hydroxyl groups [goid 30201] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISS]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISA]; Catalysis of the reaction: N-sulfo-D-glucosamine + H2O = D-glucosamine + SO4(2-) (sulfate) [goid 16250] [evidence IEA]	4632406A19Rik	4632406A19Rik
Mus musculus	RefSeq	ILMN_192825	ILMN_250709	SGSH	NM_018822.3	NM_018822.3		27029	115270982	NM_018822.3	Sgsh	NP_061292.2	ILMN_1237280	004810441	S	4097	GGGGAAATCTGGATTTGCAAGCTTTTGGCATTGAGATAGATTTTGCATGG	11	-	119204980-119205029	11qE2	Mus musculus N-sulfoglucosamine sulfohydrolase (sulfamidase) (Sgsh), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	The chemical reactions and pathways involving any proteoglycan containing heparan sulfate, any member of a group of glycosaminoglycans that have repeat units consisting of alternating alpha1->4 linked hexuronic acid and glucosamine residues, the former being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids, and the latter being either sulfated or acetylated on its amino group as well as sulfated on one of its hydroxyl groups [goid 30201] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISS]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence ISA]; Catalysis of the reaction: N-sulfo-D-glucosamine + H2O = D-glucosamine + SO4(2-) (sulfate) [goid 16250] [evidence IEA]	4632406A19Rik	4632406A19Rik
Mus musculus	RefSeq	ILMN_221723	ILMN_221723	AHI1	NM_026203.1	NM_026203.1		52906	22779929	NM_026203.1	Ahi1	NP_080479.1	ILMN_2813712	001300524	S	4631	TGCGTCCCTGGCACACTTGGGCAGGCAGCTCAGTCACTCTGAACTTGCTT	10	+	20800132-20800181	10qA3	Mus musculus Abelson helper integration site (Ahi1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D10Bwg0629e; 1700015F03Rik; Ahi-1	D10Bwg0629e; 1700015F03Rik; Ahi-1
Mus musculus	RefSeq	ILMN_213548	ILMN_213548	FRS3	NM_144939.2	NM_144939.2		107971	118130081	NM_144939.2	Frs3	NP_659188.1	ILMN_2638186	000270192	S	1878	CCGGAGAGGAGGGAACCATGGTGGAAACTGTGAAGGGTTCTCAAGGTTGC	17	+	47840978-47841027	17qC	Mus musculus fibroblast growth factor receptor substrate 3 (Frs3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]	AI449674; MGC25496; 4930417B13Rik; Snt2; Frs2beta	AI449674; MGC25496; 4930417B13Rik; Snt2; Frs2beta
Mus musculus	Riken	ILMN_206405	ILMN_206405	C130018J17RIK	ri|C130018J17|PX00167G22|AK081449|3417					AK081449	C130018J17Rik		ILMN_2579837	005700292	S	2941	GCGTGCTTTAGCATGAGTGCAGTGTTGGGAGAGCTACAGTCTGAGAGTCC										
Mus musculus	RefSeq	ILMN_217738	ILMN_217738	CRNKL1	NM_025820.3	NM_025820.3		66877	146135059	NM_025820.3	Crnkl1	NP_080096.1	ILMN_1260045	005550228	S	2880	GCTTGTTTAGAAAACAATGGCCTGCATTCACGGATGCTGAGGCAGTGTCC				2qG1	Mus musculus Crn, crooked neck-like 1 (Drosophila) (Crnkl1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence ISO]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence ISO]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5730590A01Rik; C80326; crn; 1200013P10Rik	5730590A01Rik; C80326; crn; 1200013P10Rik
Mus musculus	RefSeq	ILMN_217024	ILMN_217024	NAPRT1	NM_172607.3	NM_172607.3		223646	141801783	NM_172607.3	Naprt1	NP_766195.2	ILMN_1223102	000070376	S	864	GGGACCCTGGCCCACTCCTTTGTCACTTCATTTTCGGGTAGTGAGGTACC	15	-	75723544-75723593	15qD3	Mus musculus nicotinate phosphoribosyltransferase domain containing 1 (Naprt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: nicotinate D-ribonucleotide + diphosphate = nicotinate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4516] [evidence IEA]	9130210N20Rik	9130210N20Rik
Mus musculus	RefSeq	ILMN_217024	ILMN_217024	NAPRT1	NM_172607.3	NM_172607.3		223646	141801783	NM_172607.3	Naprt1	NP_766195.2	ILMN_1225191	004250280	S	1815	CGGGCACTGGTGGACAGTTTGAGTGCTCGAGGTCCCCTGTGAAAAAAGTC	15	-	75721419-75721427:75721428-75721468	15qD3	Mus musculus nicotinate phosphoribosyltransferase domain containing 1 (Naprt1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: nicotinate D-ribonucleotide + diphosphate = nicotinate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4516] [evidence IEA]	9130210N20Rik	9130210N20Rik
Mus musculus	RefSeq	ILMN_195247	ILMN_251418	GNG10	NM_025277.3	NM_025277.3		14700	84490417	NM_025277.3	Gng10	NP_079553.1	ILMN_2513837	000360121	S	801	GGTTGCCCATCCTGTGTGAAGCCAGTTAGATCTTCCTTTAGTTCCTATAC	4	+	59054452-59054501	4qB3	Mus musculus guanine nucleotide binding protein (G protein), gamma 10 (Gng10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AV006524	AV006524
Mus musculus	RefSeq	ILMN_195247	ILMN_251418	GNG10	NM_025277.3	NM_025277.3		14700	84490417	NM_025277.3	Gng10	NP_079553.1	ILMN_2672597	007510025	S	455	CCTCACTACCAAACTTGCTGGATGCGCCTCTTTCACCATGGAGCCTGTGT	4	+	59054106-59054155	4qB3	Mus musculus guanine nucleotide binding protein (G protein), gamma 10 (Gng10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AV006524	AV006524
Mus musculus	RefSeq	ILMN_218887	ILMN_316144	LOC100047833	XM_001479242.1	XM_001479242.1		100047833	149254411	XM_001479242.1	LOC100047833	XP_001479292.1	ILMN_1223832	001980731	S	4454	TCTCCACCGAGTTCATCAGAGTCTTCGTCTTCATCATCCTGGTCAGACTC					PREDICTED: Mus musculus similar to MK-5 type 2 (LOC100047833), mRNA.					
Mus musculus	RefSeq	ILMN_217385	ILMN_316144	LOC100047833	XM_001479242.1	XM_001479242.1		100047833	149254411	XM_001479242.1	LOC100047833	XP_001479292.1	ILMN_2682632	003460674	S	1713	CTTAATGTAAAAAGTAATTTTTATGTAAATTAATAAATCATAATTTCATT					PREDICTED: Mus musculus similar to MK-5 type 2 (LOC100047833), mRNA.					
Mus musculus	RefSeq	ILMN_221258	ILMN_221258	BAIAP2	NM_130862.4	NM_130862.4		108100	146149337	NM_130862.4	Baiap2	NP_570932.2	ILMN_2733091	002680364	S	1885	AGCATTAACTGCCGGGTGGGGGCCTGCCGGCTGAGTGGCAAAGCAGCGTT				11qE2	Mus musculus brain-specific angiogenesis inhibitor 1-associated protein 2 (Baiap2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	R75030; IRSp53	R75030; IRSp53
Mus musculus	RefSeq	ILMN_220733	ILMN_220733	RAB39	NM_175562.3	NM_175562.3		270160	133891651	NM_175562.3	Rab39	NP_780771.1	ILMN_1226696	004540338	S	2699	CTGTGTGGAGATACCAGAAGACAGTGTGTGTTTTCACGGACCAGGGGAGC	9	-	53492437-53492486	9qA5.3	Mus musculus RAB39, member RAS oncogene family (Rab39), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	C230094F14Rik	C230094F14Rik
Mus musculus	MEEBO	ILMN_186199	ILMN_186199	SCL00066.1_84	scl00066.1_84	AK005257.1			12837684	AK005257.1	scl00066.1_84		ILMN_2433470	005670433	S	2	CGTCAGGGCAAGCCCGGGTCCGTCCGGGACCTCGGCCCCGTTCTCCCCCG										
Mus musculus	Riken	ILMN_202599	ILMN_202599	E430014K09RIK	ri|E430014K09|PX00098E16|AK088390|550					AK088390	E430014K09Rik		ILMN_1257767	002630239	S	150	GTGCACCAAGAAGGCCCAACTCTGCAACCGGAATGCCACATACTTGGGAT										
Mus musculus	RefSeq	ILMN_211456	ILMN_211456	CD302	NM_025422.3	NM_025422.3		66205	146135060	NM_025422.3	Cd302	NP_079698.2	ILMN_2616097	000070564	S	1045	CTGAGCCTTTTATGGTTATTCTTATATCAGTATTTTCATGTATTAAATGT				2qC1.1	Mus musculus CD302 antigen (Cd302), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI159627; 1110055L24Rik	AI159627; 1110055L24Rik
Mus musculus	MEEBO	ILMN_220963	ILMN_220963	FMNL2	scl0003211.1_18				29126932	BC048004	Fmnl2		ILMN_2729198	004670168	S	1366	TCACTCGAGGGTAAGGATTTCTTCTAGCACACCGGTGGTGGAGGATACAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_200576	ILMN_200576	LOC383370	XM_357014.1	XM_357014.1			38083870	XM_357014.1	LOC383370		ILMN_1221006	001990022	S	1160	GGCTTCAGGCCCTTCTCGAACTGGTTCCAAACAATCAGCGCACACAGAAC										
Mus musculus	RefSeq	ILMN_194562	ILMN_233093	EDARADD	NM_133643.3	NM_133643.3		171211	127139912	NM_133643.3	Edaradd	NP_598398.3	ILMN_2507540	000520605	S	1740	CTTGGGAGTGGCATTGACAAAGAATAGTGCTCAGTTCGGCCTTTGGGAAG	13	-	12569787-12569836	13qA1	Mus musculus EDAR (ectodysplasin-A receptor)-associated death domain (Edaradd), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence NAS]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a death receptor [goid 5123] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1810032E07Rik; cr; 5830469M23Rik	1810032E07Rik; cr; 5830469M23Rik
Mus musculus	RefSeq	ILMN_194562	ILMN_233093	EDARADD	NM_133643.3	NM_133643.3		171211	127139912	NM_133643.3	Edaradd	NP_598398.3	ILMN_2643355	001500307	S	410	AGAGGTTGGGTCCCTGCGATCCTGCTGTTCTCAGGGGTCCTAGAGACTGT	13	-	12612256-12612305	13qA1	Mus musculus EDAR (ectodysplasin-A receptor)-associated death domain (Edaradd), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence NAS]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IGI]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a death receptor [goid 5123] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1810032E07Rik; cr; 5830469M23Rik	1810032E07Rik; cr; 5830469M23Rik
Mus musculus	RefSeq	ILMN_198338	ILMN_198338	LOC381174	XM_355096.1	XM_355096.1			38084011	XM_355096.1	LOC381174		ILMN_2531333	000240754	S	1183	CTCCTAGAAGTCTTTTCCTTGGAGCTGGGCGTGGTGGCCCGTGCCTTTAA										
Mus musculus	RefSeq	ILMN_187456	ILMN_187456	TNFRSF1A	NM_011609.2	NM_011609.2		21937	31560798	NM_011609.2	Tnfrsf1a	NP_035739.2	ILMN_2469333	007560685	S	18	ATGAAGTTGTGCCTACCTCCTCCGCTTGCAAATGTCACAAACCCCCAGGA	6	+	125315391-125315440	6qF3	Mus musculus tumor necrosis factor receptor superfamily, member 1a (Tnfrsf1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence TAS]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence IMP]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence IPI]	TNF-R1; TNFRp55; CD120a; p55-R; TNFR60; TNF-R55; TNFAR; TNFRI; TNF-R-I; Tnfr1; Tnfr-2; FPF; TNF-R; p55	TNF-R1; TNFRp55; CD120a; p55-R; TNFR60; TNF-R55; TNFAR; TNFRI; TNF-R-I; Tnfr1; Tnfr-2; FPF; TNF-R; p55
Mus musculus	RefSeq	ILMN_187456	ILMN_187456	TNFRSF1A	NM_011609.2	NM_011609.2		21937	31560798	NM_011609.2	Tnfrsf1a	NP_035739.2	ILMN_1241228	007160059	S	19	TGAAGTTGTGCCTACCTCCTCCGCTTGCAAATGTCACAAACCCCCAGGAC	6	+	125315392-125315441	6qF3	Mus musculus tumor necrosis factor receptor superfamily, member 1a (Tnfrsf1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IMP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IMP]; The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence TAS]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence IMP]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [evidence IPI]	TNF-R1; TNFRp55; CD120a; p55-R; TNFR60; TNF-R55; TNFAR; TNFRI; TNF-R-I; Tnfr1; Tnfr-2; FPF; TNF-R; p55	TNF-R1; TNFRp55; CD120a; p55-R; TNFR60; TNF-R55; TNFAR; TNFRI; TNF-R-I; Tnfr1; Tnfr-2; FPF; TNF-R; p55
Mus musculus	Riken	ILMN_202181	ILMN_202181	1700040F17RIK	ri|1700040F17|ZX00074N03|AK006654|818					AK006654	1700040F17Rik		ILMN_1215949	003310707	S	526	GTACTGAGACAGAGCCGGACCATAGCACTGTGAAGAGCTCCAGTGTTTCG										
Mus musculus	MEEBO	ILMN_186533	ILMN_186533	USP15	scl37410.1_176				21489968	NM_027604	Usp15		ILMN_2458442	000520497	S	2	CCGACTACCTGAGAAACCGCTTTGTGTCCCACTGTTACTAAAGCAGAAAG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]		
Mus musculus	MEEBO	ILMN_186533	ILMN_186533	USP15	scl37410.1_176				21489968	NM_027604	Usp15		ILMN_2445824	000650215	S	11	GTCTTGTATTTACAAGCTAAATATATATAGGAAATCCCAAATAAATCCCT							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence IDA]		
Mus musculus	RefSeq	ILMN_198870	ILMN_310149	LOC666792	XR_034029.1	XR_034029.1		666792	149258590	XR_034029.1	LOC666792		ILMN_1241485	005960470	S	1218	TGGAAAATGGTGCTCCCTGCCATCTGAAGAAAGCACCTGGGAGCTAGAGG	8	-	36115241-36115290	8qA4	PREDICTED: Mus musculus similar to chromodomain helicase DNA binding protein 6 (LOC666792), misc RNA.					
Mus musculus	MEEBO	ILMN_193371	ILMN_193371	LAMC3	scl21072.26_540				45504389	NM_011836	Lamc3		ILMN_1219819	000290707	S	5102	GACACATCTACACCTCCTCAGAATCAGGGCCAACAGGTGTACTCGAGCTG						A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208975	ILMN_208975	CECR5	NM_144815.2	NM_144815.2		214932	51093868	NM_144815.2	Cecr5	NP_659064.1	ILMN_2750321	003290035	S	612	CAAACCTGCAGCTGATTATGGATGTCCTTCTTAGTAACGGCCACCCCGGA	6	-	120469293-120469342	6qF1	Mus musculus cat eye syndrome chromosome region, candidate 5 homolog (human) (Cecr5), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	A930002G03Rik; MGC25951	A930002G03Rik; MGC25951
Mus musculus	RefSeq	ILMN_208975	ILMN_208975	CECR5	NM_144815.2	NM_144815.2		214932	51093868	NM_144815.2	Cecr5	NP_659064.1	ILMN_1257102	001260494	S	1718	CCGCACAGTGCAACGTTATGTGGAAACTTGTGGAGGGAGAGCCTTTGGTC	6	-	120460227-120460276	6qF1	Mus musculus cat eye syndrome chromosome region, candidate 5 homolog (human) (Cecr5), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	A930002G03Rik; MGC25951	A930002G03Rik; MGC25951
Mus musculus	RefSeq	ILMN_208975	ILMN_208975	CECR5	NM_144815.2	NM_144815.2		214932	51093868	NM_144815.2	Cecr5	NP_659064.1	ILMN_2591354	007000521	S	22	CGGGTTAGGGGTTCTCGGCGCCGGGCGCCATCTGTGGAAACTGCCTGTGC	6	-	120481246-120481295	6qF1	Mus musculus cat eye syndrome chromosome region, candidate 5 homolog (human) (Cecr5), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	A930002G03Rik; MGC25951	A930002G03Rik; MGC25951
Mus musculus	RefSeq	ILMN_217095	ILMN_217095	EXOSC9	NM_019393.2	NM_019393.2		50911	134053920	NM_019393.2	Exosc9	NP_062266.1	ILMN_2679046	005290195	S	1471	GCTGAACTTCTTGATACACTGTTTGTCTTTAACATTATGCTTTGAATAAA	3	+	36464503-36464552	3qB	Mus musculus exosome component 9 (Exosc9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence TAS]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	p5; PM/Scl-75; p6; RRP45; Pmscl1	p5; PM/Scl-75; p6; RRP45; Pmscl1
Mus musculus	RefSeq	ILMN_214899	ILMN_214899	SOX7	NM_011446.1	NM_011446.1		20680	6755611	NM_011446.1	Sox7	NP_035576.1	ILMN_2889482	002970736	S	2795	CACCCTGTGACACCCAAAGATGTTTCTGAGCTTTGGTCGCACCCCAGACA	14	+	64569098-64569147	14qD1	Mus musculus SRY-box containing gene 7 (Sox7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_214899	ILMN_214899	SOX7	NM_011446.1	NM_011446.1		20680	6755611	NM_011446.1	Sox7	NP_035576.1	ILMN_2653251	004040129	S	2694	GCACCATTCCCCTGGGCGTGAAGGGAACTTGGTTCTTGTTTCTCAAGTGG	14	+	64568997-64569046	14qD1	Mus musculus SRY-box containing gene 7 (Sox7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]		
Mus musculus	RefSeq	ILMN_221583	ILMN_221583	SIRT3	NM_022433.1	NM_022433.1		64384	11967962	NM_022433.1	Sirt3	NP_071878.1	ILMN_2737480	005550554	S	1361	CAGGCAGGCGATGCACTAGGGCAATCTAGCATGTTGATCGGTAAAGTGGC	7	-	148049619-148049668	7qF5	Mus musculus sirtuin 3 (silent mating type information regulation 2, homolog) 3 (S. cerevisiae) (Sirt3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Sir2l3; AI848213; 2310003L23Rik	Sir2l3; AI848213; 2310003L23Rik
Mus musculus	Riken	ILMN_206871	ILMN_206871	D930042J21RIK	ri|D930042J21|PX00203F03|AK086627|946					AK086627	D930042J21Rik		ILMN_1255490	005360161	S	559	AGCTACTCGGAGGGCTGAAGGCAGGAATACTTGAGTTCGGAGCCAGCGCA										
Mus musculus	RefSeq	ILMN_193001	ILMN_193001	TM9SF1	NM_028780.3	NM_028780.3		74140	142376447	NM_028780.3	Tm9sf1	NP_083056.2	ILMN_1216422	006350050	S	2209	TTTTTCCTCTTTAAAGTTCATCCGTTATATCTATGTTAACCTCAAGATGG	14	-	56255060-56255109	14qC3	Mus musculus transmembrane 9 superfamily member 1 (Tm9sf1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI893436; MP70; 1200014D02Rik	AI893436; MP70; 1200014D02Rik
Mus musculus	RefSeq	ILMN_232940	ILMN_232940	CPNE8	NM_001033851.1	NM_001033851.1		66871	76563927	NM_001033851.1	Cpne8	NP_001029023.1	ILMN_3072337	006100092	I	347	AGAACAGCACACAGTATTACCTCGTCAGAGCCCTCCACTCAGCCCTGCTG	15	-	90474057-90474106	15qE3	Mus musculus copine VIII (Cpne8), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1200003E11Rik; 1500031E20Rik	1200003E11Rik; 1500031E20Rik
Mus musculus	RefSeq	ILMN_232940	ILMN_232940	CPNE8	NM_001033851.1	NM_001033851.1		66871	76563927	NM_001033851.1	Cpne8	NP_001029023.1	ILMN_3151149	006290528	A	189	CGCCACACGAGTGGAGGTGTCAGTGTCCTGCAGAAATCTCCTTGATAGAG	15	-	90479697-90479714:90509599-90509630	15qE3	Mus musculus copine VIII (Cpne8), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1200003E11Rik; 1500031E20Rik	1200003E11Rik; 1500031E20Rik
Mus musculus	Riken	ILMN_205982	ILMN_205982	D130067M12RIK	ri|D130067M12|PX00185J10|AK051725|1570					AK051725	D130067M12Rik		ILMN_1215571	000670437	S	1285	CCAGAACTGGGAAGATAAGCTCAGAAGCCCCCCTGAAGCCCTCTGGCTAG										
Mus musculus	MEEBO	ILMN_189828	ILMN_189828	4930507D05RIK	scl38860.1.717_10						4930507D05Rik		ILMN_2464726	006110039	S	3	CAGCTCTTGGACCAAGGACCCATGATGGACGATTCTTAAGAGTCCTGAGC										
Mus musculus	RefSeq	ILMN_188004	ILMN_238656	TNK2	NM_016788.2	NM_016788.2		51789	142349964	NM_016788.2	Tnk2	NP_058068.1	ILMN_2449019	003990491	S	3339	AGTGCCACAAGGTCCTAGAGATGTTCGACTGGAACCTAGAGCAAGCCGGC	16	+	32681277-32681326	16qB3	Mus musculus tyrosine kinase, non-receptor, 2 (Tnk2), mRNA.	The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence ISO]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC37479; Ack; Pyk1; Cdgip; AW552477; ACK1	MGC37479; Ack; Pyk1; Cdgip; AW552477; ACK1
Mus musculus	Riken	ILMN_201729	ILMN_201729	1810060C03RIK	ri|1810060C03|ZX00043G04|AK007912|729					AK007912	1810060C03Rik		ILMN_2544124	002070162	S	659	CCCCTGTTCCTGTTTTAATGACGCTTGACTCCAGATGATGACGCACCCCG										
Mus musculus	RefSeq	ILMN_260759	ILMN_260759	6430502M16RIK	NM_175455.2	NM_175455.2		218440	31341946	NM_175455.2	6430502M16Rik	NP_780664.1	ILMN_2965621	000460424	S	2020	CTTGTGGCCAAAAAGCGCTTATGCCGACGGCCCCTATTTTCCCGAAAGAA	13	+	93540418-93540467	13qC3	Mus musculus RIKEN cDNA 6430502M16 gene (6430502M16Rik), mRNA.				DP58	DP58
Mus musculus	RefSeq	ILMN_195622	ILMN_248598	PTEN	NM_008960.2	NM_008960.2		19211	86355519	NM_008960.2	Pten	NP_032986.1	ILMN_2594450	003180397	S	1779	GCAGTATAGAGCGTGCAGATAATGACAAGGAGTATCTTGTACTCACCCTA	19	+	32892435-32892484	19qC1	Mus musculus phosphatase and tensin homolog (Pten), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]	Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: phosphatidylinositol-3,4,5-trisphosphate + H2O = phosphatidyl inositol-4,5-bisphosphate + phosphate [goid 16314] [evidence IDA]	MMAC1; TEP1; AI463227; A130070J02Rik; 2310035O07Rik	MMAC1; TEP1; AI463227; A130070J02Rik; 2310035O07Rik
Mus musculus	RefSeq	ILMN_195622	ILMN_248598	PTEN	NM_008960.2	NM_008960.2		19211	86355519	NM_008960.2	Pten	NP_032986.1	ILMN_2517228	006380368	S	3885	AGGACCCACTAGAGAAGCATTTATAGTTTGATGGTAAGTAGATTAGGCAG	19	+	32896323-32896372	19qC1	Mus musculus phosphatase and tensin homolog (Pten), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IMP]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]	Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: phosphatidylinositol-3,4,5-trisphosphate + H2O = phosphatidyl inositol-4,5-bisphosphate + phosphate [goid 16314] [evidence IDA]	MMAC1; TEP1; AI463227; A130070J02Rik; 2310035O07Rik	MMAC1; TEP1; AI463227; A130070J02Rik; 2310035O07Rik
Mus musculus	RefSeq	ILMN_222261	ILMN_222261	CENPP	NM_025495.1	NM_025495.1		66336	29789149	NM_025495.1	Cenpp	NP_079771.1	ILMN_2970623	000020608	S	731	GGGATGGTTTTTCCAAAGCTGGATCTTCTCACCAAAGTCCCAGAGCGAGC	13	-	49476269-49476274:49476632-49476675	13qA5	Mus musculus centromere protein P (Cenpp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]			4921518G09Rik; 1700022C02Rik	4921518G09Rik; 1700022C02Rik
Mus musculus	RefSeq	ILMN_217140	ILMN_217140	RAB40C	NM_139154.1	NM_139154.1		224624	21040230	NM_139154.1	Rab40c	NP_631893.1	ILMN_2679513	004590408	S	2318	CGATAGAATGGTATAGACTTTGAGGACCTGGATTGGCCTGCGTGCACACC	17	-	26019145-26019194	17qA3.3	Mus musculus Rab40c, member RAS oncogene family (Rab40c), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	RAR3	RAR3
Mus musculus	RefSeq	ILMN_197176	ILMN_318153	LOC667192	XR_031433.1	XR_031433.1		667192	149249055	XR_031433.1	LOC667192		ILMN_1241860	001780041	S	1550	CTAGAACTCAGACGTGTTCACCCTGGACGAGGGACGGTCAGTCCTACTTT				2qA1	PREDICTED: Mus musculus similar to zinc finger and BTB domain containing 2 (LOC667192), misc RNA.					
Mus musculus	Riken	ILMN_202691	ILMN_202691	PELI1	ri|A930031K15|PX00067G08|AK020915|1108					AK020915	Peli1		ILMN_1258266	002970592	S	973	CCAGCACCCTCATTAGGTGGCTCATAACTGCCTGGGACTCCAGTTCTAGG										
Mus musculus	Riken	ILMN_203873	ILMN_203873	A330106H01RIK	ri|A630020O20|PX00144P11|AK041560|822					AK041560	A330106H01Rik		ILMN_1235888	003290441	S	702	CTTTTGCTATAGATGTAGTAAATAAGGCCATACTCAGCTGCTACCGCTGG										
Mus musculus	RefSeq	ILMN_201590	ILMN_247701	KBTBD8	NM_001008785.3	NM_001008785.3		243574	146198704	NM_001008785.3	Kbtbd8	NP_001008785.1	ILMN_2543053	007000075	S	1727	GGCCGCCATTTTGAGTGTGCGGTGGCTAAACTCTATCCTCAGTGTCTTCA				6qD2	Mus musculus kelch repeat and BTB (POZ) domain containing 8 (Kbtbd8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1842; MGC91215; Takrp; AU040152	mKIAA1842; MGC91215; Takrp; AU040152
Mus musculus	RefSeq	ILMN_201590	ILMN_247701	KBTBD8	NM_001008785.3	NM_001008785.3		243574	146198704	NM_001008785.3	Kbtbd8	NP_001008785.1	ILMN_2604669	003130592	S	3788	GGTCTGTACAACAGTTGGTCCTTTTGTCATAACTGTGTCTATTGAGGGAA				6qD2	Mus musculus kelch repeat and BTB (POZ) domain containing 8 (Kbtbd8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mKIAA1842; MGC91215; Takrp; AU040152	mKIAA1842; MGC91215; Takrp; AU040152
Mus musculus	RefSeq	ILMN_215405	ILMN_215405	MRPS11	NM_026498.1	NM_026498.1		67994	17157978	NM_026498.1	Mrps11	NP_080774.1	ILMN_2786708	003520338	S	571	TGATCTCAATCACAGACAACACCCCGGTCCCACACAATGGCTGCCGACCC	7	+	85937581-85937630	7qD3	Mus musculus mitochondrial ribosomal protein S11 (Mrps11), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	C79873; 0710005I03Rik	C79873; 0710005I03Rik
Mus musculus	RefSeq	ILMN_215405	ILMN_215405	MRPS11	NM_026498.1	NM_026498.1		67994	17157978	NM_026498.1	Mrps11	NP_080774.1	ILMN_2681946	003290343	S	268	GCTCTCTGCAGTGGGCAGGGATGAAGTTTGAGGACGTCCCAATTGCACAC	7	+	85933606-85933655	7qD3	Mus musculus mitochondrial ribosomal protein S11 (Mrps11), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	C79873; 0710005I03Rik	C79873; 0710005I03Rik
Mus musculus	Riken	ILMN_203950	ILMN_203950	A430090G16RIK	ri|A430090G16|PX00138F05|AK040384|2494					AK040384	A430090G16Rik		ILMN_2561221	001240619	S	2301	TGAAGCTTGGGGTCTTTGTTGGCAGGCAACTTAGAAAGGCTTCAGAGTAC										
Mus musculus	RefSeq	ILMN_198962	ILMN_198962	LOC331295	XM_285610.1	XM_285610.1			28485162	XM_285610.1	LOC331295		ILMN_1229116	004610224	S	208	GCCCAGTGGTTCACTGGTTTCCTGCATGGACCCCAGCCTGAGCAGATTCT										
Mus musculus	MEEBO	ILMN_214260	ILMN_214260	MTAP1A	scl0017754.1_4	XM_194040.3			38075632	XM_194040.3	Mtap1a		ILMN_2646070	003440619	S	1740	AGCAAGCTAGCCAAACGGGAGGAGGTGTTAGAAGAGGGAGCCAAGGAGGC						Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_222402	ILMN_222402	CCR7	NM_007719.2	NM_007719.2		12775	116268120	NM_007719.2	Ccr7	NP_031745.2	ILMN_2821118	002570291	S	1794	AAAGGTAGGGGAAAGGTGACAGAAAGGAGAGAAGGTGACCCTGCTGGCTG	11	-	99005644-99005693	11qD	Mus musculus chemokine (C-C motif) receptor 7 (Ccr7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IMP]	EBI1; Cdw197; Ebi1h; CD197; Cmkbr7	EBI1; Cdw197; Ebi1h; CD197; Cmkbr7
Mus musculus	Riken	ILMN_207261	ILMN_207261	0610033M06RIK	ri|G630005K04|PL00012N06|AK090146|2714					AK090146	0610033M06Rik		ILMN_1253176	003400750	S	2530	AAGAGTTGTAATCGGCAGGGAGGCAGTGGGAAGGGCAGAAGGGACTGAGG										
Mus musculus	Riken	ILMN_204846	ILMN_204846	A130036M01RIK	ri|A130036M01|PX00122L03|AK037679|1692					AK037679	A130036M01Rik		ILMN_2568058	005270201	S	1073	GGCAGACCTATCAGAATTACACCAGAGACTCTAAAACCCAGAAGATCCTG										
Mus musculus	MEEBO	ILMN_219843	ILMN_219843	2810046M22RIK	scl0269633.1_325	NM_026621.1			13386103	NM_026621.1	2810046M22Rik		ILMN_2714278	007200719	S	485	CTGTCATACTGGCAAATTATGAGCCGCGGGGAGCCTCCTGAAGAACTCAA										
Mus musculus	MEEBO	ILMN_215422	ILMN_215422	E130306D19RIK	scl24403.4_53	XM_131404.3			38078279	XM_131404.3	E130306D19Rik		ILMN_2659317	002710703	S	1295	CTGTCTGTGGCCAGCGGTTAATCCCATTTGCAGCTTTGAAAAGGAGTCCA						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197531	ILMN_197531	LOC209654	XM_139098.2	XM_139098.2			38076459	XM_139098.2	LOC209654		ILMN_1250533	006060220	S	1407	CCTTTCCCAGAGTGGTGTAAGCTATTCCCGTGATTCTGCTCTGTGCTGGC										
Mus musculus	RefSeq	ILMN_257635	ILMN_257635	LRRC8B	NM_001033550.1	NM_001033550.1		433926	75677564	NM_001033550.1	Lrrc8b	NP_001028722.1	ILMN_2826235	005390504	S	2580	TCACTGGTAACTACCTGGAGACACTGCCTGTGGAGCTGGAAGGGTGTCAG	5	+	105726230-105726279	5qE5	Mus musculus leucine rich repeat containing 8 family, member B (Lrrc8b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0231; mKIAA0231; R75581; Ta-lrrp	KIAA0231; mKIAA0231; R75581; Ta-lrrp
Mus musculus	RefSeq	ILMN_257635	ILMN_257635	LRRC8B	NM_001033550.1	NM_001033550.1		433926	75677564	NM_001033550.1	Lrrc8b	NP_001028722.1	ILMN_2826237	003990379	S	2506	ACTCCTGGGAAGAAATAGCCTAACAGATTTGTCCCCTCTGGTGGGGGAGC	5	+	105726156-105726205	5qE5	Mus musculus leucine rich repeat containing 8 family, member B (Lrrc8b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0231; mKIAA0231; R75581; Ta-lrrp	KIAA0231; mKIAA0231; R75581; Ta-lrrp
Mus musculus	Riken	ILMN_201745	ILMN_201745	MTF1	ri|2810004P16|ZX00045P06|AK012676|782					AK012676	Mtf1		ILMN_2544252	004480543	S	612	GGGCTTAGAGCCTTCTGTAGTCTTGCCTGTCAACAACACATCCGCTTCCT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus [goid 46686] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Initiates or upregulates transcription in the presence of zinc [goid 42156] [evidence IDA]		
Mus musculus	Riken	ILMN_202267	ILMN_202267	1600017E01RIK	ri|1600017E01|ZX00050K15|AK005477|1235					AK005477	1600017E01Rik		ILMN_1214828	000290452	S	760	CACTGGCACTTGTTGCCGCCTTGTCAGAGCCTCAGGGAGTCAGAAAACGG										
Mus musculus	RefSeq	ILMN_219909	ILMN_219909	BAZ1B	NM_011714.1	NM_011714.1		22385	6755992	NM_011714.1	Baz1b	NP_035844.1	ILMN_2793270	006770176	S	4767	GAGAAGCCCTCAAGGGGTGTGGGGGAGGCAGGAAAGCTGGGAGGATTTAA	5	+	135720369-135720418	5qG2	Mus musculus bromodomain adjacent to zinc finger domain, 1B (Baz1b), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IDA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Wbscr9; C87820; WSTF	Wbscr9; C87820; WSTF
Mus musculus	RefSeq	ILMN_241219	ILMN_241219	FBXO39	NM_001037713.2	NM_001037713.2		327959	141803481	NM_001037713.2	Fbxo39	NP_001032802.1	ILMN_3162148	004220646	S	1991	GCAAGCCCCTTTAAGACTGAGCCATCTCTCCGGCCCCCAAAACCTGGATT	11	+	72121679-72121728	11qB4	Mus musculus F-box protein 39 (Fbxo39), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP24-450M24.4	RP24-450M24.4
Mus musculus	RefSeq	ILMN_205280	ILMN_224503	ACAP2	NM_030138.2	NM_030138.2		78618	75677395	NM_030138.2	Acap2	NP_084414.1	ILMN_1216865	004540348	S	1871	GCCAGAGCATCTGTCCACACCCCAGTCAAAAGTAATGACAGCGGGATCCA	16	-	31107203-31107228:31108113-31108136	16qB2	Mus musculus ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 (Acap2), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISO]	Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence ISO]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence ISO]	mKIAA0041; 4832442G16; CNT-B2; ACAP2; 9530039J15Rik	mKIAA0041; 4832442G16; CNT-B2; ACAP2; 9530039J15Rik
Mus musculus	RefSeq	ILMN_207520	ILMN_224503	ACAP2	NM_030138.2	NM_030138.2		78618	75677395	NM_030138.2	Acap2	NP_084414.1	ILMN_2587955	004250474	I	231	GGCCAGGAGGAGGCAAGATGAAGATGACGGTGGATTTCGAGGAGTGTCTG	16	-	31201044-31201077:31201078-31201093	16qB2	Mus musculus ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 (Acap2), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISO]	Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence ISO]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence ISO]	mKIAA0041; 4832442G16; CNT-B2; ACAP2; 9530039J15Rik	mKIAA0041; 4832442G16; CNT-B2; ACAP2; 9530039J15Rik
Mus musculus	RefSeq	ILMN_207520	ILMN_224503	ACAP2	NM_030138.2	NM_030138.2		78618	75677395	NM_030138.2	Acap2	NP_084414.1	ILMN_1224273	002970634	S	6404	ACATTATGTAAGAATTGTAAATATACTTGGTTACTTTGTATGCTGAAAAT	16	-	31092538-31092587	16qB2	Mus musculus ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 (Acap2), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISO]	Any cellular process that depends upon or alters the actin cytoskeleton, that part of the cytoskeleton comprising actin filaments and their associated proteins [goid 30029] [evidence ISO]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence ISO]	mKIAA0041; 4832442G16; CNT-B2; ACAP2; 9530039J15Rik	mKIAA0041; 4832442G16; CNT-B2; ACAP2; 9530039J15Rik
Mus musculus	RefSeq	ILMN_201024	ILMN_201024	LOC385574	XM_358289.1	XM_358289.1			38087999	XM_358289.1	LOC385574		ILMN_1253866	004860546	S	79	GCAGTGGCATTTGAGGAGGCTAAGGAGATTGCTTTTCAGGTTAGCAGCAG										
Mus musculus	RefSeq	ILMN_222631	ILMN_222631	SOD1	NM_011434.1	NM_011434.1		20655	45597446	NM_011434.1	Sod1	NP_035564.1	ILMN_2752552	005420093	S	395	CGGTGTGGCCAATGTGTCCATTGAAGATCGTGTGATCTCACTCTCAGGAG	16	+	90225429-90225478	16qC3.3	Mus musculus superoxide dismutase 1, soluble (Sod1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function [goid 1895] [evidence IMP]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IGI]; The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 2262] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction [goid 60087] [evidence IMP]; The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 50665] [evidence IMP]; The process by which the structure and material content of mature peripheral nervous system myelin is kept in a functional state [goid 32287] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an axon injury stimulus [goid 48678] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IMP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IMP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [evidence IMP]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IMP]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IGI]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence TAS]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [evidence IMP]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IMP]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IMP]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence TAS]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IDA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IMP]	SODC; CuZnSOD; MGC107553; Ipo-1; Sod-1; B430204E11Rik; Ipo1; Cu/Zn-SOD	SODC; CuZnSOD; MGC107553; Ipo-1; Sod-1; B430204E11Rik; Ipo1; Cu/Zn-SOD
Mus musculus	RefSeq	ILMN_218661	ILMN_218661	CRABP1	NM_013496.2	NM_013496.2		12903	133891818	NM_013496.2	Crabp1	NP_038524.1	ILMN_1227671	002630689	S	618	ATATTAGGCAACCCCATTTTCCCCATGACATTGTTGTAGTGTCCTCCCCT	9	+	54620793-54620842	9qA5.3	Mus musculus cellular retinoic acid binding protein I (Crabp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 5501] [evidence TAS]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	Crabp-1; Rbp-5; AI326249; CrabpI	Crabp-1; Rbp-5; AI326249; CrabpI
Mus musculus	Riken	ILMN_202590	ILMN_202590	SPI2-1	ri|5330437D01|PX00054L20|AK019935|1296					AK019935	Spi2-1		ILMN_2550760	000520735	S	905	AAAACCGAGTCTGTGTTACAGGACCCAGGGGCTTCACACTAAGCCCACGC										
Mus musculus	RefSeq	ILMN_197028	ILMN_197028	LOC240871	XM_136343.4	XM_136343.4			38073572	XM_136343.4	LOC240871		ILMN_1215823	007380075	S	2202	GCTCCTCATAATCCCGACATCTGATCCTGCCAAAAACGATGCGACCTCCC										
Mus musculus	Riken	ILMN_204926	ILMN_204926	COPS3	ri|C230080H11|PX00176K18|AK048906|1778					AK048906	Cops3		ILMN_1218678	000870674	S	1723	GCCAGGCTGTAGCTGGGATGCCCATGTGACGAAAGCAGGAAGTGATGATG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IDA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_194653	ILMN_194653	TOPBP1	NM_176979.5	NM_176979.5		235559	118130322	NM_176979.5	Topbp1	NP_795953.2	ILMN_1213963	003940131	S	4808	CTGGTTATTGACTGTTCCTAATGAGGCTGAAATAGTTTTAACAAGGAGAT	9	+	103252454-103252503	9qF1	Mus musculus topoisomerase (DNA) II binding protein 1 (Topbp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [evidence ISA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI256758; mKIAA0259; 2810429C13Rik; 1110031N14Rik; D430026L04Rik	AI256758; mKIAA0259; 2810429C13Rik; 1110031N14Rik; D430026L04Rik
Mus musculus	RefSeq	ILMN_253062	ILMN_253062	MED19	NM_025885.1	NM_025885.1		381379	21313193	NM_025885.1	Med19	NP_080161.1	ILMN_2820098	000540670	S	1637	TCACACTATGCAACCTTGGCTGGCTATGAACACTAGGCTGGCCCCAAGCT	2	+	84488655-84488704	2qD	Mus musculus mediator of RNA polymerase II transcription, subunit 19 homolog (yeast) (Med19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	LCMR1; DKFZp586K0524; 2410018M14Rik	LCMR1; DKFZp586K0524; 2410018M14Rik
Mus musculus	RefSeq	ILMN_191652	ILMN_259450	MMP24	NM_010808.3	NM_010808.3		17391	115495468	NM_010808.3	Mmp24	NP_034938.3	ILMN_2480963	002360152	S	4195	CCTCGGCCTGGGTGACATCACAGCATCTCAGTGTCGGTCACATTTTAAAC	2	+	155643993-155644042	2qH1	Mus musculus matrix metallopeptidase 24 (Mmp24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MT5-MMP; AU040325	MT5-MMP; AU040325
Mus musculus	RefSeq	ILMN_191652	ILMN_259450	MMP24	NM_010808.3	NM_010808.3		17391	115495468	NM_010808.3	Mmp24	NP_034938.3	ILMN_2486694	002230477	S	3809	GATGGCAGGGGCAGATAATAAGACCTCCTTGTGCTTCATCTGAGGGTAAG	2	+	155643607-155643656	2qH1	Mus musculus matrix metallopeptidase 24 (Mmp24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MT5-MMP; AU040325	MT5-MMP; AU040325
Mus musculus	RefSeq	ILMN_259450	ILMN_259450	MMP24	NM_010808.3	NM_010808.3		17391	115495468	NM_010808.3	Mmp24	NP_034938.3	ILMN_2866099	000580037	S	4115	TGCGGTCATCTGTTTGTCCATCAGCCCAGGTCAGAGCAGTCAGAGGGGCA	2	+	155643913-155643962	2qH1	Mus musculus matrix metallopeptidase 24 (Mmp24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MT5-MMP; AU040325	MT5-MMP; AU040325
Mus musculus	RefSeq	ILMN_260321	ILMN_260321	OLFR218	NM_001001809.1	NM_001001809.1		258880	49227319	NM_001001809.1	Olfr218	NP_001001809.1	ILMN_3161008	003940356	S	801	TTCCCTAGGGCAGGACAGGCTCATCTCAGTGACTTACACTGTCATCACCC	1	+	175134289-175134338	1qH3	Mus musculus olfactory receptor 218 (Olfr218), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR267-3; MGC129219; Olfr218-ps1	MOR267-3; MGC129219; Olfr218-ps1
Mus musculus	RefSeq	ILMN_217576	ILMN_217576	HNRNPH1	NM_021510.2	NM_021510.2		59013	125628660	NM_021510.2	Hnrnph1	NP_067485.1	ILMN_2688923	002120048	S	957	ACGGTGGCTCTACTTTCCAGAGTACAACCGGACACTGTGTACACATGCGG	11	+	50196475-50196524	11qB1.3	Mus musculus heterogeneous nuclear ribonucleoprotein H1 (Hnrnph1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hnrnph; AI642080; E430005G16Rik	Hnrnph; AI642080; E430005G16Rik
Mus musculus	RefSeq	ILMN_217576	ILMN_217576	HNRNPH1	NM_021510.2	NM_021510.2		59013	125628660	NM_021510.2	Hnrnph1	NP_067485.1	ILMN_1256671	005720687	S	946	CAGATATGGGGACGGTGGCTCTACTTTCCAGAGTACAACCGGACACTGTG	11	+	50196464-50196513	11qB1.3	Mus musculus heterogeneous nuclear ribonucleoprotein H1 (Hnrnph1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hnrnph; AI642080; E430005G16Rik	Hnrnph; AI642080; E430005G16Rik
Mus musculus	RefSeq	ILMN_217576	ILMN_217576	HNRNPH1	NM_021510.2	NM_021510.2		59013	125628660	NM_021510.2	Hnrnph1	NP_067485.1	ILMN_2684987	003390546	S	579	CGGGGGAGGCCTTCGTGCAGTTTGCTTCACAGGAAATAGCTGAAAAGGCT	11	+	50195018-50195067	11qB1.3	Mus musculus heterogeneous nuclear ribonucleoprotein H1 (Hnrnph1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hnrnph; AI642080; E430005G16Rik	Hnrnph; AI642080; E430005G16Rik
Mus musculus	RefSeq	ILMN_217576	ILMN_217576	HNRNPH1	NM_021510.2	NM_021510.2		59013	125628660	NM_021510.2	Hnrnph1	NP_067485.1	ILMN_1218767	000430369	S	1268	AATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAGCCAAATGATGGG	11	+	50197359-50197408	11qB1.3	Mus musculus heterogeneous nuclear ribonucleoprotein H1 (Hnrnph1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Hnrnph; AI642080; E430005G16Rik	Hnrnph; AI642080; E430005G16Rik
Mus musculus	RefSeq	ILMN_185418	ILMN_185418	ZMYM2	NM_029498.2	NM_029498.2		76007	37595741	NM_029498.2	Zmym2	NP_083774.2	ILMN_1245540	000940086	S	4175	CAATTATGAACTGGATGAAGACACAGACTAAAAAGGACCATTTCAGAAGC	14	+	57578714-57578744:57578745-57578763	14qC3	Mus musculus zinc finger, MYM-type 2 (Zmym2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5830413P05Rik; RAMP; Zfp198; SCLL; MYM; FIM; MGC51607	5830413P05Rik; RAMP; Zfp198; SCLL; MYM; FIM; MGC51607
Mus musculus	RefSeq	ILMN_185418	ILMN_185418	ZMYM2	NM_029498.2	NM_029498.2		76007	37595741	NM_029498.2	Zmym2	NP_083774.2	ILMN_2781493	006560040	S	4531	CCCTGCAGAGGGCGGGCTTTATGCGTTCCTGACCAGATGGTTGTGTATGG	14	+	57579070-57579119	14qC3	Mus musculus zinc finger, MYM-type 2 (Zmym2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	5830413P05Rik; RAMP; Zfp198; SCLL; MYM; FIM; MGC51607	5830413P05Rik; RAMP; Zfp198; SCLL; MYM; FIM; MGC51607
Mus musculus	RefSeq	ILMN_189581	ILMN_240662	SYN2	NM_013681.1	NM_013681.1		20965	8567409	NM_013681.1	Syn2	NP_038709.1	ILMN_1215972	006770189	S	2216	GTCTGGTGCAGTTCGAGTGTGTGTGAATAAGCTGGCTGTGCCTGTAGAGC	6	+	115224939-115224988	6qE3	Mus musculus synapsin II (Syn2), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IMP]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IGI]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence TAS]	AI841723; AI836018; 2900074L19Rik	AI841723; AI836018; 2900074L19Rik
Mus musculus	RefSeq	ILMN_215811	ILMN_215811	SPEER3	NM_027650.1	NM_027650.1		71026	13386245	NM_027650.1	Speer3	NP_081926.1	ILMN_2795564	002570682	S	802	ACTCGGTGTGAATAGGAGGAAGCCAGTGAGCCAGCTGATTCAGGGTGTTG	5	+	13802449-13802459:13802460-13802498	5qA1	Mus musculus spermatogenesis associated glutamate (E)-rich protein 3 (Speer3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4933405P08Rik; SPEER-3	4933405P08Rik; SPEER-3
Mus musculus	RefSeq	ILMN_245251	ILMN_245251	FCF1	NM_028632.1	NM_028632.1		73736	39930450	NM_028632.1	Fcf1	NP_082908.1	ILMN_2906718	001240068	S	483	GCCACAGTTGACCGTGACCTATAACGAAGAATCCGGAAGATCCCTGGCGT	12	+	86323204-86323227:86323228-86323253	12qD2	Mus musculus FCF1 small subunit (SSU) processome component homolog (S. cerevisiae) (Fcf1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		1110008B24Rik	1110008B24Rik
Mus musculus	RefSeq	ILMN_220443	ILMN_220443	C1QTNF1	NM_019959.2	NM_019959.2		56745	133892163	NM_019959.2	C1qtnf1	NP_064343.1	ILMN_2722108	003850364	S	2320	GTGGCCCTTGGTTAGGATCCCTCTCTTTTCCTTCTGGAGCTCAATGTACG	11	+	118311085-118311134	11qE2	Mus musculus C1q and tumor necrosis factor related protein 1 (C1qtnf1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IDA]		CTRP1; 1600017K21Rik; Zsig37	CTRP1; 1600017K21Rik; Zsig37
Mus musculus	RefSeq	ILMN_190825	ILMN_326937	LOC100043536	XM_001480508.1	XM_001480508.1		100043536	149256583	XM_001480508.1	LOC100043536	XP_001480558.1	ILMN_2473597	002940497	S	2319	CACTAATAACATTAAGTACTTTATTCCATATATATGTTTTCAACATTTTG	7	+	21004257-21004306	7qA3	PREDICTED: Mus musculus similar to pheromone receptor V3R8, transcript variant 2 (LOC100043536), mRNA.					
Mus musculus	RefSeq	ILMN_219475	ILMN_219475	SP6	NM_031183.1	NM_031183.1		83395	40538743	NM_031183.1	Sp6	NP_112460.1	ILMN_1258571	004120187	S	3297	CTGTGAACCCACTTGGGGGCGAGGAGGAGGCAGAAACAGCCTGTGTTTTT	11	+	96885974-96886023	11qD	Mus musculus trans-acting transcription factor 6 (Sp6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence ISS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Klf14; AI592962; 1110025J03Rik; AA591031; Epfn	Klf14; AI592962; 1110025J03Rik; AA591031; Epfn
Mus musculus	RefSeq	ILMN_219475	ILMN_219475	SP6	NM_031183.1	NM_031183.1		83395	40538743	NM_031183.1	Sp6	NP_112460.1	ILMN_2993473	001580487	S	3094	GCTTAGGGGGAACTCCTACATGGAGTATTAGGGGGCACGGAGATGCTCCC	11	+	96885771-96885820	11qD	Mus musculus trans-acting transcription factor 6 (Sp6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence ISS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Klf14; AI592962; 1110025J03Rik; AA591031; Epfn	Klf14; AI592962; 1110025J03Rik; AA591031; Epfn
Mus musculus	RefSeq	ILMN_219475	ILMN_219475	SP6	NM_031183.1	NM_031183.1		83395	40538743	NM_031183.1	Sp6	NP_112460.1	ILMN_2709337	003520538	S	3061	GCGCTACCAAGACAACCTTTTTTCAGTGACCATGCTTAGGGGGAACTCCT	11	+	96885738-96885787	11qD	Mus musculus trans-acting transcription factor 6 (Sp6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence ISS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Klf14; AI592962; 1110025J03Rik; AA591031; Epfn	Klf14; AI592962; 1110025J03Rik; AA591031; Epfn
Mus musculus	RefSeq	ILMN_257090	ILMN_257090	XIST	NR_001570.1	NR_001570.1		213742	37704376	NR_001570.1	Xist		ILMN_3123341	003450373	A	11879	CAGGACACCTGTGACTTCCAAGAGCGGGGAACTACTTACTGCCATCAATA	X	-	100656033-100656049:100661718-100661750	XqD	Mus musculus inactive X specific transcripts (Xist) on chromosome X.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IDA]	Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IDA]; Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex [goid 9048] [evidence IGI]		AI314753; A430022B11	AI314753; A430022B11
Mus musculus	RefSeq	ILMN_220633	ILMN_220633	IFT80	NM_026641.1	NM_026641.1		68259	28076906	NM_026641.1	Ift80	NP_080917.1	ILMN_1226497	007320139	S	3675	CTCATGCACACTAATTGGGAAAAACATCACCCCTTTCCCTCCACTGTAAT	3	-	68696681-68696730	3qE1	Mus musculus intraflagellar transport 80 homolog (Chlamydomonas) (Ift80), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			Wdr56; mKIAA1374; 4921524P20Rik	Wdr56; mKIAA1374; 4921524P20Rik
Mus musculus	RefSeq	ILMN_213030	ILMN_213030	RTN2	NM_013648.5	NM_013648.5		20167	118129806	NM_013648.5	Rtn2	NP_038676.1	ILMN_1250904	006060523	S	1684	CCCAGTGGGAAGTGCCTGAGCGACCCGGACTACATTTCCTAAGAGGCTCT	7	+	19881246-19881295	7qA3	Mus musculus reticulon 2 (Z-band associated protein) (Rtn2), transcript variant B, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nspl1; Ms10p; MMS10-P; MGC35990	Nspl1; Ms10p; MMS10-P; MGC35990
Mus musculus	MEEBO	ILMN_211989	ILMN_211989	DACH2	scl093837.3_30	NM_033605.1			15809023	NM_033605.1	Dach2		ILMN_2668082	000610730	S	2324	ATTGACCATATTTGATGATTTTTTATGCTCATTTCTGCTTGGCTTTTGTC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	Riken	ILMN_201889	ILMN_201889	ATP8A2	ri|4931439I04|PX00017D15|AK016508|1725					AK016508	Atp8a2		ILMN_1214520	005130392	S	1345	CACGTAGGTGTCCTTGAGAGCCACACCCAGCTGAACTCATGCGAGAGTAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222469	ILMN_261214	SILG111	XM_985146.1	XM_985146.1		20461	94367636	XM_985146.1	Silg111	XP_990240.1	ILMN_2750013	005910368	S	550	GCCGGAGGGAGACCACAGTGACCCATCAAGAAGCCCATGACAGTTCCAGA				2qH3	PREDICTED: Mus musculus silica-induced gene 111 (Silg111), mRNA.					
Mus musculus	RefSeq	ILMN_216268	ILMN_248194	4930547N16RIK	NM_029249.2	NM_029249.2		75317	126215543	NM_029249.2	4930547N16Rik	NP_083525.1	ILMN_2669172	005490181	S	3321	CTGTTTGGAGCCTGTGTTCTGTGAAGAGAAGTTCGGTTTGTATCCCAGCT	10	-	87554400-87554449	10qC1	Mus musculus RIKEN cDNA 4930547N16 gene (4930547N16Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AI503644	AI503644
Mus musculus	RefSeq	ILMN_192902	ILMN_243209	2900064A13RIK	NM_133749.2	NM_133749.2		73024	133892058	NM_133749.2	2900064A13Rik	NP_598510.1	ILMN_2755059	004610767	S	937	GAAAAACCCAGCTTTCATCCTTTGTATGAGGTCAATATTAATGTCACTGA	2	+	112307458-112307507	2qE3	Mus musculus RIKEN cDNA 2900064A13 gene (2900064A13Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC144287; MGC144286; c11orf3; AI451465; RP23-52C15.1	MGC144287; MGC144286; c11orf3; AI451465; RP23-52C15.1
Mus musculus	RefSeq	ILMN_213474	ILMN_213474	OLFR810	NM_146550.1	NM_146550.1		258543	33239331	NM_146550.1	Olfr810	NP_666761.1	ILMN_2637389	004850014	S	558	CTGCACAGACACACAGCTCCTGGAAACAATGGGATTTGTCTCAGCTTTGG	10	-	129228036-129228085	10qD3	Mus musculus olfactory receptor 810 (Olfr810), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR113-4	MOR113-4
Mus musculus	Riken	ILMN_203773	ILMN_203773	A230055I01RIK	ri|A230055I01|PX00128F03|AK038691|832					AK038691	A230055I01Rik		ILMN_1226149	001660021	S	618	TGAGTGCAGATCCACCGTAAGGCCAGAAGAGGGCGCAAGATCTCTGGAGC										
Mus musculus	Riken	ILMN_203179	ILMN_203179	PCSK2	ri|A330107P19|PX00064I07|AK039783|3689					AK039783	Pcsk2		ILMN_1218370	005360731	S	3561	TCTGCCCTTCCCATAAAGACCCACAGAAGCCATCAGGGAACCTACTAAGG						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IMP]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IMP]; The formation of mature enkephalin, a pentapeptide hormone involved in regulating pain and nociception in the body by proteolytic processing of enkephalin propeptide [goid 34230] [evidence IDA]; Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein [goid 16540] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 16893422] [evidence IEP]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_252833	ILMN_252833	2310047M10RIK	NM_028005.2	NM_028005.2		71923	120952554	NM_028005.2	2310047M10Rik	NP_082281.2	ILMN_2946608	001980113	S	1672	GGCACGGGGGAGTGTCTCACTGCTCTCAGGGTTCCGGTCGAATTGTTACT				11qB3	Mus musculus RIKEN cDNA 2310047M10 gene (2310047M10Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	RP23-19I2.4	RP23-19I2.4
Mus musculus	RefSeq	ILMN_223423	ILMN_237131	OLFR1414	NM_147039.1	NM_147039.1		259041	22128870	NM_147039.1	Olfr1414	NP_667250.1	ILMN_1222406	001500674	S	800	CCCGGAGCTCCAACAAACTCATCTCTGTTCTGTATACAGTTCTTACACCC	1	-	94407754-94407803	1qD	Mus musculus olfactory receptor 1414 (Olfr1414), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR103-2	MOR103-2
Mus musculus	RefSeq	ILMN_187347	ILMN_187347	TTR	NM_013697.3	NM_013697.3		22139	146134390	NM_013697.3	Ttr	NP_038725.1	ILMN_2443330	002680113	S	539	CTTGCTCTATAAACCGTGTTAGCAGCTCAGGAAGATGCCGTGAAGCATTC				18qA2	Mus musculus transthyretin (Ttr), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of either of the compounds secreted by the thyroid gland, mainly thyroxine and triiodothyronine. This is achieved by the iodination and joining of tyrosine molecules to form the precursor thyroglobin, proteolysis of this precursor gives rise to the thyroid hormones [goid 6590] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]	MGC107649; AA408768; D17860; prealbumin; AI787086	MGC107649; AA408768; D17860; prealbumin; AI787086
Mus musculus	RefSeq	ILMN_244249	ILMN_244249	LOC435565	NM_001013828.1	NM_001013828.1		435565	62000685	NM_001013828.1	LOC435565	NP_001013850.1	ILMN_2783223	006770259	S	1029	CTGAAGAAAAGCATGAAGTTCTACCGCACTGTGTTTGGAGTGGATGAAGC	18	+	60516105-60516154	18qD3	Mus musculus similar to interferon-inducible GTPase (LOC435565), mRNA.					
Mus musculus	RefSeq	ILMN_210059	ILMN_228108	IPO9	NM_153774.1	NM_153774.1		226432	112734860	NM_153774.1	Ipo9	NP_722469.1	ILMN_1235337	002850368	S	3946	CTGCACATAACCACAGAGTCTGATATTCAAAGGTATCCCTATCCCTCAGG	1	-	137281132-137281181	1qE4	Mus musculus importin 9 (Ipo9), mRNA. XM_923899 XM_923904 XM_923916 XM_983357 XM_983389 XM_983428 XM_983504	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISA]; The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane [goid 6610] [evidence ISA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence ISA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [evidence TAS]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IDA]	C78347; Ranbp9; Imp9; mKIAA1192; 0710008K06Rik	C78347; Ranbp9; Imp9; mKIAA1192; 0710008K06Rik
Mus musculus	RefSeq	ILMN_201963	ILMN_228108	IPO9	NM_153774.1	NM_153774.1		226432	112734860	NM_153774.1	Ipo9	NP_722469.1	ILMN_2545974	001440390	S	788	GCTGCACCACGGGGAAGATCAGGACTTTGGCTGCACCCTTTTCCAGTTCC	1	-	137303562-137303611	1qE4	Mus musculus importin 9 (Ipo9), mRNA. XM_923899 XM_923904 XM_923916 XM_983357 XM_983389 XM_983428 XM_983504	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence ISA]; The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane [goid 6610] [evidence ISA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence ISA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [evidence TAS]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IDA]	C78347; Ranbp9; Imp9; mKIAA1192; 0710008K06Rik	C78347; Ranbp9; Imp9; mKIAA1192; 0710008K06Rik
Mus musculus	RefSeq	ILMN_189876	ILMN_189876	XLR3B	NM_011727.1	NM_011727.1		22446	6756018	NM_011727.1	Xlr3b	NP_035857.1	ILMN_2465182	004210750	S	2	CGGATGCATACAAACTCAAGAAACATGCCGAAACACTCTCTAATATGTTT	X	+	70432554-70432591:70434515-70434526	XqA7.3	Mus musculus X-linked lymphocyte-regulated 3B (Xlr3b), mRNA.					
Mus musculus	MEEBO	ILMN_192330	ILMN_192330	SCL0002690.1_1	scl0002690.1_1	AK004440.1			12835624	AK004440.1	scl0002690.1_1		ILMN_2487104	000460053	S	13	TGAGGCTGATGGATTCTGGACGAGCTCCAAAGGAGAAAAACTCCCCCCGG										
Mus musculus	RefSeq	ILMN_209648	ILMN_209648	CACNA1C	NM_009781.2	NM_009781.2		12288	113930698	NM_009781.2	Cacna1c	NP_033911.2	ILMN_2677449	007320372	S	1248	CAGTCTGGTCATCTTTGGATCCTTTTTCGTTCTAAATCTGGTTCTCGGTG	6	-	118692292-118692341	6qF1	Mus musculus calcium channel, voltage-dependent, L type, alpha 1C subunit (Cacna1c), mRNA. XM_925104 XM_925108 XM_925111	A complex composed of proteins required for beta adrenergic receptor activation of protein kinase A. It includes the Cav 12. subunit of L-type calcium channel, protein kinase A regulatory subunit 2(PKAR2), adenyl cyclase, beta-adrenergic receptor, G-alpha-S, protein phosphatase 2A (PP2A) and caveolin 3 (CAV3) [goid 2095] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body [goid 60083] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IDA]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IMP]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP];  [goid 15270] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cav1.2; Cchl1a1	Cav1.2; Cchl1a1
Mus musculus	RefSeq	ILMN_209648	ILMN_209648	CACNA1C	NM_009781.2	NM_009781.2		12288	113930698	NM_009781.2	Cacna1c	NP_033911.2	ILMN_2682982	001780379	S	4259	CCACAGAGATCAATCGGAACAACAACTTCCAGACGTTCCCCCAGGCTGTG	6	-	118574398-118574447	6qF1	Mus musculus calcium channel, voltage-dependent, L type, alpha 1C subunit (Cacna1c), mRNA. XM_925104 XM_925108 XM_925111	A complex composed of proteins required for beta adrenergic receptor activation of protein kinase A. It includes the Cav 12. subunit of L-type calcium channel, protein kinase A regulatory subunit 2(PKAR2), adenyl cyclase, beta-adrenergic receptor, G-alpha-S, protein phosphatase 2A (PP2A) and caveolin 3 (CAV3) [goid 2095] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body [goid 60083] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IDA]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IMP]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP];  [goid 15270] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cav1.2; Cchl1a1	Cav1.2; Cchl1a1
Mus musculus	RefSeq	ILMN_209648	ILMN_209648	CACNA1C	NM_009781.2	NM_009781.2		12288	113930698	NM_009781.2	Cacna1c	NP_033911.2	ILMN_2597831	006960630	S	3066	CGTTGTGAAGATTTTACGAGTGCTGCGAGTCCTCAGACCCCTGAGGGCCA	6	-	118617541-118617590	6qF1	Mus musculus calcium channel, voltage-dependent, L type, alpha 1C subunit (Cacna1c), mRNA. XM_925104 XM_925108 XM_925111	A complex composed of proteins required for beta adrenergic receptor activation of protein kinase A. It includes the Cav 12. subunit of L-type calcium channel, protein kinase A regulatory subunit 2(PKAR2), adenyl cyclase, beta-adrenergic receptor, G-alpha-S, protein phosphatase 2A (PP2A) and caveolin 3 (CAV3) [goid 2095] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body [goid 60083] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IDA]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IMP]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP];  [goid 15270] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cav1.2; Cchl1a1	Cav1.2; Cchl1a1
Mus musculus	RefSeq	ILMN_209648	ILMN_209648	CACNA1C	NM_009781.2	NM_009781.2		12288	113930698	NM_009781.2	Cacna1c	NP_033911.2	ILMN_2840929	003710059	S	6228	GGGACAGTTTGCTCAAGATCCCAAGTTCATCGAGGTCACCACCCAGGAGC	6	-	118544142-118544191	6qF1	Mus musculus calcium channel, voltage-dependent, L type, alpha 1C subunit (Cacna1c), mRNA. XM_925104 XM_925108 XM_925111	A complex composed of proteins required for beta adrenergic receptor activation of protein kinase A. It includes the Cav 12. subunit of L-type calcium channel, protein kinase A regulatory subunit 2(PKAR2), adenyl cyclase, beta-adrenergic receptor, G-alpha-S, protein phosphatase 2A (PP2A) and caveolin 3 (CAV3) [goid 2095] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence TAS]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The process leading to shortening and/or development of tension in the urinary bladder smooth muscle tissue involved in the expulsion urine from the body [goid 60083] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IMP]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IDA]; Any process that modulates the frequency, rate or extent of growth of an organ of an organism [goid 46620] [evidence IMP]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IMP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IMP]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IDA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP];  [goid 15270] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cav1.2; Cchl1a1	Cav1.2; Cchl1a1
Mus musculus	MEEBO	ILMN_195362	ILMN_195362	IGHV1S42_D13202_IG_HEAVY_VARIABLE_1S42_216	IGHV1S42_D13202_Ig_heavy_variable_1S42_216						IGHV1S42_D13202_Ig_heavy_variable_1S42_216		ILMN_2514916	003930504	S	15	GCCTTTAGTGGATTGGACTTATTATTCCTTACAATGGTGATACTAGCAAC										
Mus musculus	Riken	ILMN_204007	ILMN_204007	2900089I03RIK	ri|2900089I03|ZX00083H21|AK076143|1560					AK076143	2900089I03Rik		ILMN_2561655	007150072	S	1031	CCCCAAGGGGGGAATAGCGGGAGAATGCAGAAAGGGAACCACTTCCCAAG										
Mus musculus	RefSeq	ILMN_218246	ILMN_221105	ST8SIA5	NM_153124.1	NM_153124.1		225742	24233503	NM_153124.1	St8sia5	NP_694764.1	ILMN_1216035	002120452	S	1663	CCACCTGGCTGAGCTCAAAAGACTTCAGGGATATCTAATCAAAACCCCCG	18	+	77493863-77493912	18qE3	Mus musculus ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 (St8sia5), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IDA]	ST8SiaV; Siat8e; MGC41119	ST8SiaV; Siat8e; MGC41119
Mus musculus	RefSeq	ILMN_221105	ILMN_221105	ST8SIA5	NM_153124.1	NM_153124.1		225742	24233503	NM_153124.1	St8sia5	NP_694764.1	ILMN_2999670	002690300	S	1705	AACCCCCGTGTTAGCATATCCCCAAGAGTCCAGGAGCTGAGAGCCATGCC	18	+	77493905-77493954	18qE3	Mus musculus ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 (St8sia5), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]; Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IDA]	ST8SiaV; Siat8e; MGC41119	ST8SiaV; Siat8e; MGC41119
Mus musculus	MEEBO	ILMN_184305	ILMN_184305	TTN	scl19096.11_134	NM_176926.2			31342408	NM_176926.2	Ttn		ILMN_1228221	004570072	S	4	CCAAGTTACCCATGGACAGGTGACTGTGTTATTCCAGCGTGGAACCCACG						A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	MEEBO	ILMN_221291	ILMN_221291	C030013D06RIK	scl45498.1.1_284	XM_147855.1			20876139	XM_147855.1	C030013D06Rik		ILMN_2733565	002060224	S	1028	TTTAACTTTGTGAAGTTGGGAAACTGTTTAAGTTTGTAAATTTGTTTAAT										
Mus musculus	MEEBO	ILMN_185128	ILMN_185128	UBE2S	scl31799.8.1_22	NM_133777.1			19527003	NM_133777.1	Ube2s		ILMN_2424399	001980632	S	7	TCACAGAAATCCATGGGGGTGCATGCAGCACCAGCAGCGGGAGGGCTGAG							The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]		
Mus musculus	MEEBO	ILMN_186657	ILMN_186657	9790357_4546_RC	9790357_4546_rc						9790357_4546_rc		ILMN_2437399	003800575	S	9	CCTCAAACTGTTAAAAATTATACGAAAAATAATAGTAACCAATTAGTATG										
Mus musculus	Riken	ILMN_202972	ILMN_202972	GFPT1	ri|A430001B09|PX00134O03|AK039792|1257					AK039792	Gfpt1		ILMN_2553736	004010168	S	577	GTGCTTTGAACTGATTTTATTGGGCAGTGTTGGGAGGGGAATCCAGGTGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate [goid 4360] [evidence IEA]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184248	ILMN_251639	TMEM164	NM_177592.3	NM_177592.3		209497	54633299	NM_177592.3	Tmem164	NP_808260.2	ILMN_2748271	002630671	S	1044	GACTGGCCTCATGTTCTTTTACCACTTCAGCTTCCTGCAGATCCTCGGCC	X	+	139267093-139267142	XqF2	Mus musculus transmembrane protein 164 (Tmem164), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI852450; AI316850; F730011B02; AW547186	AI852450; AI316850; F730011B02; AW547186
Mus musculus	RefSeq	ILMN_216807	ILMN_216807	LCMT1	NM_025304.3	NM_025304.3		30949	42794772	NM_025304.3	Lcmt1	NP_079580.2	ILMN_2758728	005560072	S	71	CTTTAGTCGGTGCCTGTTTCTTGCCTCTTTCCCCCACTGCTCGTTTCCCC	7	+	130521566-130521615	7qF3	Mus musculus leucine carboxyl methyltransferase 1 (Lcmt1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The methylation of the C-terminal amino acid of a protein [goid 6481] [evidence ISO]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to the carbon atom of the C-terminal residue of a protein [goid 3880] [evidence ISO]	Lcmt; MGC11807; AL033290	Lcmt; MGC11807; AL033290
Mus musculus	RefSeq	ILMN_216807	ILMN_216807	LCMT1	NM_025304.3	NM_025304.3		30949	42794772	NM_025304.3	Lcmt1	NP_079580.2	ILMN_2943477	003400609	S	1240	TGCAGCCTCACTTTGTTGGTCCTGCTGCACATCCGGAACCCGTGGTTACA	7	+	130573743-130573792	7qF3	Mus musculus leucine carboxyl methyltransferase 1 (Lcmt1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The methylation of the C-terminal amino acid of a protein [goid 6481] [evidence ISO]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to the carbon atom of the C-terminal residue of a protein [goid 3880] [evidence ISO]	Lcmt; MGC11807; AL033290	Lcmt; MGC11807; AL033290
Mus musculus	RefSeq	ILMN_216807	ILMN_216807	LCMT1	NM_025304.3	NM_025304.3		30949	42794772	NM_025304.3	Lcmt1	NP_079580.2	ILMN_2943476	001260551	S	1159	CCTATTGATCTGCTGAAGGCTCGTGCTGGGGTGGAAGGTGAAGGCTCTAG	7	+	130573662-130573669:130573670-130573711	7qF3	Mus musculus leucine carboxyl methyltransferase 1 (Lcmt1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The methylation of the C-terminal amino acid of a protein [goid 6481] [evidence ISO]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to the carbon atom of the C-terminal residue of a protein [goid 3880] [evidence ISO]	Lcmt; MGC11807; AL033290	Lcmt; MGC11807; AL033290
Mus musculus	Riken	ILMN_206343	ILMN_206343	EXT2	ri|D330041A20|PX00192O17|AK084772|986					AK084772	Ext2		ILMN_1254650	001300451	S	757	GAGGGGGGTGATCTGAAGGGAATGGGCGTGGCTTTGTCTGTCTCACACGT						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IMP]; The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence IEA]; Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50509] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IDA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + heparan sulfate = UDP + (N-acetyl-D-glucosaminyl)-heparan sulfate [goid 42328] [evidence IC ]		
Mus musculus	RefSeq	ILMN_220877	ILMN_220877	BAT2	NM_020027.2	NM_020027.2		53761	92110036	NM_020027.2	Bat2	NP_064411.2	ILMN_1254154	002900056	S	6419	CCTGCGCTGGATGCCGAAGCCTTGGGAACGGGCAGGGCCACCTTCTCGAG	17	-	35293688-35293737	17qB1	Mus musculus HLA-B associated transcript 2 (Bat2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D17H6S51E; Bat-2; 3110039B05Rik; G2; mKIAA4178; KIAA4178; Wbp12	D17H6S51E; Bat-2; 3110039B05Rik; G2; mKIAA4178; KIAA4178; Wbp12
Mus musculus	RefSeq	ILMN_223729	ILMN_316599	C230040G06	XM_001476210.1	XM_001476210.1		327749	149260705	XM_001476210.1	C230040G06	XP_001476260.1	ILMN_2768268	001740703	S	1320	TAAAGGTGCAAACACGTGGGCCTTGTCTGGTCTGCCCCCCTAATAGCTGG	10	-	42691327-42691376	10qB2	PREDICTED: Mus musculus hypothetical protein C230040G06 (C230040G06), mRNA.					
Mus musculus	RefSeq	ILMN_187076	ILMN_246290	CPEB3	NM_198300.2	NM_198300.2		208922	84370379	NM_198300.2	Cpeb3	NP_938042.2	ILMN_2589525	002320279	S	3062	CGGAGGCCGCCGTTCCTGACTGCATGTTTACTTAATGCGGTTGCTGCATG	19	-	37098461-37098510	19qC2	Mus musculus cytoplasmic polyadenylation element binding protein 3 (Cpeb3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA0940; mKIAA0940; 4831444O18Rik	KIAA0940; mKIAA0940; 4831444O18Rik
Mus musculus	RefSeq	ILMN_187076	ILMN_246290	CPEB3	NM_198300.2	NM_198300.2		208922	84370379	NM_198300.2	Cpeb3	NP_938042.2	ILMN_1257525	004070735	S	5083	GGTCCTGCTGTGGCCTTTCCTTGATGGGACACTTGAACTAGTGGATTTTT	19	-	37096440-37096489	19qC2	Mus musculus cytoplasmic polyadenylation element binding protein 3 (Cpeb3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA0940; mKIAA0940; 4831444O18Rik	KIAA0940; mKIAA0940; 4831444O18Rik
Mus musculus	RefSeq	ILMN_258522	ILMN_258522	TCF25	NM_001037878.1	NM_001037878.1		66855	83776552	NM_001037878.1	Tcf25	NP_001032967.1	ILMN_3038404	007000356	I	2483	CTCAGCCTGGGAACCTTAGAGGAAACTGGAAGGGCTGGAAGTGTCGCAGC	8	+	126287727-126287776	8qE1	Mus musculus transcription factor 25 (basic helix-loop-helix) (Tcf25), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nulp1; 1100001J13Rik; D8Ertd325e; 1810041K11Rik; mKIAA1049	Nulp1; 1100001J13Rik; D8Ertd325e; 1810041K11Rik; mKIAA1049
Mus musculus	RefSeq	ILMN_258522	ILMN_258522	TCF25	NM_001037878.1	NM_001037878.1		66855	83776552	NM_001037878.1	Tcf25	NP_001032967.1	ILMN_3112736	004590139	A	1858	CAGTCAGCCACGGAAACACAATCGCCCTCTTCTTCCGGTCCTTGTTGCCA	8	+	126286724-126286773	8qE1	Mus musculus transcription factor 25 (basic helix-loop-helix) (Tcf25), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Nulp1; 1100001J13Rik; D8Ertd325e; 1810041K11Rik; mKIAA1049	Nulp1; 1100001J13Rik; D8Ertd325e; 1810041K11Rik; mKIAA1049
Mus musculus	Riken	ILMN_207049	ILMN_207049	GRB10	ri|B430307L05|PX00072K09|AK080969|3343					AK080969	Grb10		ILMN_1257352	007000592	S	2976	CACACAGAGGTCTTACTGTACAGGGACAGCCTGGACATTGCACTCAATTC						That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IPI]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IPI]		
Mus musculus	RefSeq	ILMN_191400	ILMN_244819	SRGAP2	NM_001081011.1	NM_001081011.1		14270	124486599	NM_001081011.1	Srgap2	NP_001074480.1	ILMN_2478748	003190010	S	5430	GATCCCATGGTGTGATTTCCTAGCTCTGGTGCTCCTGGGGAAGCACGATG	1	-	133184466-133184515	1qE4	Mus musculus SLIT-ROBO Rho GTPase activating protein 2 (Srgap2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	srGAP3; AI448945; 9930124L22Rik; Fnbp2; FBP2	srGAP3; AI448945; 9930124L22Rik; Fnbp2; FBP2
Mus musculus	RefSeq	ILMN_191400	ILMN_244819	SRGAP2	NM_001081011.1	NM_001081011.1		14270	124486599	NM_001081011.1	Srgap2	NP_001074480.1	ILMN_2687570	007100348	S	3851	GCCTGCGCCTTCCGGCCTGTAAAGTCTGTCAAGATGGCTGCTCCAGTCAA	1	-	133186045-133186094	1qE4	Mus musculus SLIT-ROBO Rho GTPase activating protein 2 (Srgap2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	srGAP3; AI448945; 9930124L22Rik; Fnbp2; FBP2	srGAP3; AI448945; 9930124L22Rik; Fnbp2; FBP2
Mus musculus	RefSeq	ILMN_200047	ILMN_200047	LOC384184	XM_357473.1	XM_357473.1			38080013	XM_357473.1	LOC384184		ILMN_2537408	005560768	S	1189	GCATTGCTGGACCCTCTGGACACTCCATGTGGACACACCTACTGCACCCT										
Mus musculus	RefSeq	ILMN_222867	ILMN_237269	OLFR284	NM_146281.1	NM_146281.1		258278	22129720	NM_146281.1	Olfr284	NP_666393.1	ILMN_2755939	003610601	S	631	ATGATTGTTTGCTCTTATGGCCGCATTGTCACCACTGTCCTGAGGGTCAG	15	-	98170690-98170739	15qF1	Mus musculus olfactory receptor 284 (Olfr284), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR160-4	MOR160-4
Mus musculus	MEEBO	ILMN_189747	ILMN_189747	SCL0003352.1_6	scl0003352.1_6	U36575.1			1353398	U36575.1	scl0003352.1_6		ILMN_2464014	005490564	S	5	CACACACCTTAGCTGGATACAAAACATATTATGAGACCCAGTGACTGGTC										
Mus musculus	RefSeq	ILMN_192189	ILMN_184845	UCHL4	NM_033607.1	NM_033607.1		93841	15809025	NM_033607.1	Uchl4	NP_291085.1	ILMN_2485802	004560553	S	886	AAGAAACTGTTGTAGAAGGAATGTTCTAGTACAAGAATAGCCCAGCAGTG	9	+	64083893-64083942	9qC	Mus musculus ubiquitin carboxyl-terminal esterase L4 (Uchl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184845	ILMN_184845	UCHL4	NM_033607.1	NM_033607.1		93841	15809025	NM_033607.1	Uchl4	NP_291085.1	ILMN_2781878	000990181	S	954	CCCAGTACTCAGGAGACAGAGGCAGGTGGCTCTCCAAGTTCTAGACTAGC	9	+	64083961-64084010	9qC	Mus musculus ubiquitin carboxyl-terminal esterase L4 (Uchl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	RefSeq	ILMN_184845	ILMN_184845	UCHL4	NM_033607.1	NM_033607.1		93841	15809025	NM_033607.1	Uchl4	NP_291085.1	ILMN_1235288	002630603	S	892	CTGTTGTAGAAGGAATGTTCTAGTACAAGAATAGCCCAGCAGTGGTGGTG	9	+	64083899-64083948	9qC	Mus musculus ubiquitin carboxyl-terminal esterase L4 (Uchl4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190653	ILMN_190653	BC020108	scl51893.2_691						BC020108		ILMN_2472093	005270639	S	14	TGGCCAGGCTGATGGTTGTGGAGGAGCCTGTGAACTTGATTAAAGTGCCA										
Mus musculus	MEEBO	ILMN_212785	ILMN_212785	4921508D12RIK	scl20258.4.1_252				51706410	XM_485069	4921508D12Rik		ILMN_1217312	005560706	S	941	CTGTGGGGCTACAGGTTTGGGTATCTGAGGCTTGCATGTGAACTGTAGCA										
Mus musculus	RefSeq	ILMN_185326	ILMN_240087	6530401N04RIK	NM_029545.2	NM_029545.2		328092	142384131	NM_029545.2	6530401N04Rik	NP_083821.1	ILMN_2632293	007510187	S	2294	GTCATATGTCTGCTAAACTCAGGGACCCTACTCTCTAACTAAGGTCAGAG	12	-	53098714-53098763	12qC1	Mus musculus RIKEN cDNA 6530401N04 gene (6530401N04Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of D-amino acids, the dextrorotatory isomer of amino acids [goid 19478] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	4930578F06Rik; B830049N13Rik	4930578F06Rik; B830049N13Rik
Mus musculus	RefSeq	ILMN_210525	ILMN_210525	4933428G20RIK	NM_021493.2	NM_021493.2		58996	114796636	NM_021493.2	4933428G20Rik	NP_067468.2	ILMN_1247490	004610494	S	5137	CTGCTGCCCAGGTCTGTCAGTCTTTCGGGTTTATGCAAAGATTTGCTGTA	11	+	97363401-97363450	11qD	Mus musculus RIKEN cDNA 4933428G20 gene (4933428G20Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A330041B18Rik; Arhgap23	A330041B18Rik; Arhgap23
Mus musculus	MEEBO	ILMN_185498	ILMN_185498	2900006F19RIK	scl072899.4_110				51712565	XM_355346	2900006F19Rik		ILMN_2427525	002810553	S	15	AGAAATTACTTTTGATGCTATACTTTTTGTGTGTTAGGTAAGAGAAGAAA										
Mus musculus	Riken	ILMN_201883	ILMN_201883	4931403I22RIK	ri|4931403I22|PX00015L20|AK016428|1419					AK016428	4931403I22Rik		ILMN_2545342	002120253	S	503	GGACACAGAGGGAAGAAAAGATCACTCTAGGAGGTGGGAGCCAAGTTCTG										
Mus musculus	RefSeq	ILMN_213077	ILMN_213077	CUL2	NM_029402.1	NM_029402.1		71745	19482161	NM_029402.1	Cul2	NP_083678.1	ILMN_2987369	004290719	S	3232	GGAGTTCCACCAGGCATCTTGTATAGGGACATGAGATTTCATGAGTTTGT	18	+	3435920-3435969	18qA1	Mus musculus cullin 2 (Cul2), mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mKIAA4106; AI327301; 4932411N15Rik; KIAA4106; 1300003D18Rik	mKIAA4106; AI327301; 4932411N15Rik; KIAA4106; 1300003D18Rik
Mus musculus	Riken	ILMN_202641	ILMN_202641	5730599A22RIK	ri|5730599A22|PX00093M02|AK019991|2105					AK019991	5730599A22Rik		ILMN_1212946	006180746	S	1820	TTTAAGGCGCCCACGACATCCAGACTTAGCTGGGTTTTGCCAATTATGGC										
Mus musculus	RefSeq	ILMN_211933	ILMN_211933	DLGAP2	NM_172910.1	NM_172910.1		244310	27370395	NM_172910.1	Dlgap2	NP_766498.1	ILMN_2937486	006420341	S	4362	GCATTCTCAGACTGCTACCAAACTTGACTTCCCAGGGTACCTTTAAAGGG	8	+	14847516-14847565	8qA1.1	Mus musculus discs, large (Drosophila) homolog-associated protein 2 (Dlgap2), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]		DAP2; Sapap2; 6430596N04Rik	DAP2; Sapap2; 6430596N04Rik
Mus musculus	RefSeq	ILMN_211933	ILMN_211933	DLGAP2	NM_172910.1	NM_172910.1		244310	27370395	NM_172910.1	Dlgap2	NP_766498.1	ILMN_2937484	001230491	S	4292	CCATTACACACACAGCATTTCCTTTCAACCTCGCTGCTTAAGCGACACGG	8	+	14847446-14847495	8qA1.1	Mus musculus discs, large (Drosophila) homolog-associated protein 2 (Dlgap2), mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]		DAP2; Sapap2; 6430596N04Rik	DAP2; Sapap2; 6430596N04Rik
Mus musculus	RefSeq	ILMN_215298	ILMN_215298	CDKL2	NM_177270.3	NM_177270.3		53886	33859824	NM_177270.3	Cdkl2	NP_796244.2	ILMN_2657790	006100196	S	3481	CTGACAACGGAGGGACTGCGTCAGCTACCTTATAATGTGCAGTCTTGAGT	5|NT_114413.1	+	28998-29047	5qE2	Mus musculus cyclin-dependent kinase-like 2 (CDC2-related kinase) (Cdkl2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	KKIAMRE; AI505225; 5330436L21Rik; Kkm; MGC144031; MGC144032	KKIAMRE; AI505225; 5330436L21Rik; Kkm; MGC144031; MGC144032
Mus musculus	RefSeq	ILMN_215298	ILMN_215298	CDKL2	NM_177270.3	NM_177270.3		53886	33859824	NM_177270.3	Cdkl2	NP_796244.2	ILMN_1242674	003170747	S	3481	CCTGACAACGGAGGGACTGCGTCAGCTACCTTATAATGTGCAGTCTTGAG	5|NT_114413.1	+	28998-29047	5qE2	Mus musculus cyclin-dependent kinase-like 2 (CDC2-related kinase) (Cdkl2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	KKIAMRE; AI505225; 5330436L21Rik; Kkm; MGC144031; MGC144032	KKIAMRE; AI505225; 5330436L21Rik; Kkm; MGC144031; MGC144032
Mus musculus	RefSeq	ILMN_215298	ILMN_215298	CDKL2	NM_177270.3	NM_177270.3		53886	33859824	NM_177270.3	Cdkl2	NP_796244.2	ILMN_2657791	003440088	S	3485	CAACGGAGGGACTGCGTCAGCTACCTTATAATGTGCAGTCTTGAGTTTGC	5|NT_114413.1	+	29002-29051	5qE2	Mus musculus cyclin-dependent kinase-like 2 (CDC2-related kinase) (Cdkl2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]	KKIAMRE; AI505225; 5330436L21Rik; Kkm; MGC144031; MGC144032	KKIAMRE; AI505225; 5330436L21Rik; Kkm; MGC144031; MGC144032
Mus musculus	RefSeq	ILMN_211285	ILMN_211285	LYRM4	NM_201358.2	NM_201358.2		380840	113681250	NM_201358.2	Lyrm4	NP_958746.1	ILMN_1221211	006980382	S	1175	GCTGTTTAACACCTTAGAGTCAACAGGGAGTGAAGAACCCAAAGATGGAA	13	-	36070956-36071005	13qA3.3	Mus musculus LYR motif containing 4 (Lyrm4), mRNA.				MGC38622; Gm903; BC034664	MGC38622; Gm903; BC034664
Mus musculus	RefSeq	ILMN_217577	ILMN_217577	TMEM154	NM_177260.2	NM_177260.2		320782	31343187	NM_177260.2	Tmem154	NP_796234.1	ILMN_1237114	004230403	S	3269	TTTCTGTAGCCCCAGCCTCTCTAATCTCCTTCTCACCCCCTCACCCTTCC	3	+	84508424-84508473	3qF1	Mus musculus transmembrane protein 154 (Tmem154), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9930117H01Rik	9930117H01Rik
Mus musculus	Riken	ILMN_206082	ILMN_206082	E230011J22RIK	ri|E230011J22|PX00209H14|AK054000|3198					AK054000	E230011J22Rik		ILMN_1259927	006250307	S	1397	GACAATGAGCGCTGTCCAGACACGAGGAGCCAGCTTCAGGTTAGGATTCC										
Mus musculus	RefSeq	ILMN_196968	ILMN_196968	LOC238316	XM_153454.2	XM_153454.2			38050480	XM_153454.2	LOC238316		ILMN_1219549	003140630	S	2614	CCAATAAGCTGCTCTGGGCTATCCACTATGAAGACTCACCAGGCGTGCGG										
Mus musculus	RefSeq	ILMN_218707	ILMN_218707	ZFP706	NM_026521.3	NM_026521.3		68036	34328458	NM_026521.3	Zfp706	NP_080797.1	ILMN_1243014	006980255	S	3910	GTACTGCTATTTGTCCTGTTGAAATCAGCTTTCAGACTGGCTCCAGTGTC	15	-	36927239-36927288	15qB3.1	Mus musculus zinc finger protein 706 (Zfp706), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	3110006P09Rik; C77232; AW536850; AA793007	3110006P09Rik; C77232; AW536850; AA793007
Mus musculus	RefSeq	ILMN_210160	ILMN_210160	AKR1E1	NM_018859.2	NM_018859.2		56043	93277107	NM_018859.2	Akr1e1	NP_061347.2	ILMN_2602837	000070019	S	1222	TTGTCAGTTAGTCGTAGCCTTTCTGGCTTCTATTTTCAGAAGTGAAATGC	13	-	4592177-4592226	13qA1	Mus musculus aldo-keto reductase family 1, member E1 (Akr1e1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	1810061I10Rik	1810061I10Rik
Mus musculus	MEEBO	ILMN_224268	ILMN_224268	D830046C22RIK	scl0320197.1_100				31342800	NM_177097	D830046C22Rik		ILMN_2777633	006510390	S	1864	GCCCAGGAACCCTGACACTTCAGAGTCTCACCAGGAATCCTGAGGGTCAA										
Mus musculus	RefSeq	ILMN_201191	ILMN_201191	LOC384920	XM_357940.1	XM_357940.1			38089725	XM_357940.1	LOC384920		ILMN_1212800	003370044	S	1	ATGAGTGTCCGCTTGGGAGAAGGAGTAATCCAGGGAAACGAACCTCTGCC										
Mus musculus	Riken	ILMN_206972	ILMN_206972	4930580J09RIK	ri|4930580J09|PX00641C15|AK076970|827					AK076970	4930580J09Rik		ILMN_2584072	000630561	S	275	TCACCGTCTCCGCCCACTGAGCTGTGCTCGCCAATCAGAGAAAAACCTCG										
Mus musculus	RefSeq	ILMN_221925	ILMN_221925	SEC22A	NM_133704.4	NM_133704.4		317717	118130956	NM_133704.4	Sec22a	NP_598465.2	ILMN_1253671	004890601	S	493	TAATCCCAGGTCTCTTTCAACAAAAATAAATCTGTCTGACATGCAGATGG	16	-	35347795-35347844	16qB3	Mus musculus SEC22 vesicle trafficking protein homologe A (S. cerevisiae) (Sec22a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		1810005C06Rik; Sec22l2	1810005C06Rik; Sec22l2
Mus musculus	RefSeq	ILMN_221925	ILMN_221925	SEC22A	NM_133704.4	NM_133704.4		317717	118130956	NM_133704.4	Sec22a	NP_598465.2	ILMN_2747735	003190241	S	328	GTTGTGCAGTGAGAATTATCCAAATGTTCTCGCCTTCTCTTTCCTGGATG	16	-	35348997-35349046	16qB3	Mus musculus SEC22 vesicle trafficking protein homologe A (S. cerevisiae) (Sec22a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		1810005C06Rik; Sec22l2	1810005C06Rik; Sec22l2
Mus musculus	RefSeq	ILMN_221925	ILMN_221925	SEC22A	NM_133704.4	NM_133704.4		317717	118130956	NM_133704.4	Sec22a	NP_598465.2	ILMN_2742128	003390072	S	3659	GGGTCAGAAGGGAGCAAGTTAGACAGGGCTCTGTCAAAGATGAAACACAT	16	-	35311500-35311549	16qB3	Mus musculus SEC22 vesicle trafficking protein homologe A (S. cerevisiae) (Sec22a), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		1810005C06Rik; Sec22l2	1810005C06Rik; Sec22l2
Mus musculus	RefSeq	ILMN_190753	ILMN_259706	4930509G22RIK	XM_981411.1	XM_981411.1		67734	94401011	XM_981411.1	4930509G22Rik	XP_986505.1	ILMN_2472977	005050543	S	1793	TGGACCCAGAGTGCTACTGTAAGCTCAGGAAGTCGTCAGTACTGGGCCAG					PREDICTED: Mus musculus RIKEN cDNA 4930509G22 gene (4930509G22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_223434	ILMN_223434	ADRB3	NM_013462.3	NM_013462.3		11556	133891719	NM_013462.3	Adrb3	NP_038490.2	ILMN_2764057	007560349	S	1923	TCACCTTCCCAGCCAGCCCTGTTGAAGCCAGGCAGAGTCCACCGCTCAAC	8	-	28337730-28337779	8qA2	Mus musculus adrenergic receptor, beta 3 (Adrb3), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IGI]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria [goid 50873] [evidence IGI]; Any homeostatic process by which an organism produces heat, thereby raising its internal temperature [goid 31649] [evidence IGI]; The process that results in increased metabolic rate in tissues of an organism. It is triggered by the detection of dietary excess. This process is achieved via signalling in the sympathetic nervous system [goid 2024] [evidence IGI]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with a beta-3 adrenergic receptor [goid 31699] [evidence IDA];  [goid 4939] [evidence IEA];  [goid 4935] [evidence IEA]	Adrb-3	Adrb-3
Mus musculus	RefSeq	ILMN_199653	ILMN_199653	LOC382851	XM_356709.1	XM_356709.1			38075590	XM_356709.1	LOC382851		ILMN_2536001	004060400	S	475	CTGGGACCTCCACTGGAAGGAAATATGATTCGAACCTCGCCCTCATGTGG										
Mus musculus	MEEBO	ILMN_223622	ILMN_223622	1700036D21RIK	scl36421.5.1_91	NM_148940.1			22507348	NM_148940.1	1700036D21Rik		ILMN_1242978	003940689	S	1071	TACAAGTGTCGGGAAGAGTTTGAGGGGCCCATTGCTGGTAGCATAGCACC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219976	ILMN_219976	KCNJ5	NM_010605.4	NM_010605.4		16521	141801261	NM_010605.4	Kcnj5	NP_034735.3	ILMN_1254097	005490086	S	1310	CGTGCTCAACTGGAACAGGAAGAGTTCGAAGTTGTGGTCATACTAGAAGG	9	-	32129682-32129731	9qA4	Mus musculus potassium inwardly-rectifying channel, subfamily J, member 5 (Kcnj5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5242] [evidence IEA];  [goid 15467] [evidence IEA]	Kir3.4; GIRK4	Kir3.4; GIRK4
Mus musculus	RefSeq	ILMN_196643	ILMN_196643	D630013G24RIK	XM_357326.1	XM_357326.1			38077281	XM_357326.1	D630013G24Rik		ILMN_2743143	006980689	S	5179	CACCCTGGGGTCTTTACGTAGCTACGATTTTCACGGTTGTACACTCTGGT										
Mus musculus	RefSeq	ILMN_196643	ILMN_196643	D630013G24RIK	XM_357326.1	XM_357326.1			38077281	XM_357326.1	D630013G24Rik		ILMN_2525183	004590437	S	1367	CCTTCCTAAAGCCCCACAACCCAGGAAAAGGGCAGAAGGTGGATGCAGAC										
Mus musculus	Riken	ILMN_202135	ILMN_202135	CCNT2	ri|2900041I18|ZX00068P06|AK013634|989					AK013634	Ccnt2		ILMN_1215530	001190376	S	758	CGGGCTGCCAGTGTTGCTTTTCTAGTTCCCATCTGGATTGCTTATGGTGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	MEEBO	ILMN_192276	ILMN_192276	4930520K10RIK	scl38992.1.1_95						4930520K10Rik		ILMN_2486585	005340719	S	14	GCTGAAGAGTTACCGGTTTGGCCCTGTGCTGGTGACGGTAGTGGTGGAAC										
Mus musculus	RefSeq	ILMN_196599	ILMN_196599	D130071N09	NM_177566.2	NM_177566.2			31343356	NM_177566.2	D130071N09		ILMN_2728155	005960364	S	2443	TGCCACACCTCTATAACCCCCGTGACAAATGTGCAAGGGCAGGAACCATC										
Mus musculus	RefSeq	ILMN_196599	ILMN_196599	D130071N09	NM_177566.2	NM_177566.2			31343356	NM_177566.2	D130071N09		ILMN_1223660	002030692	S	2571	GGAGCCAGGTGTGATGGTACGTCCTGTAATTCCAGCATTCCAGAGGCTGG										
Mus musculus	RefSeq	ILMN_196946	ILMN_196946	LOC332480	XM_284812.1	XM_284812.1			28480227	XM_284812.1	LOC332480		ILMN_2526349	000670605	S	177	GGCCCCAGGAGCGCTGGGCCCCGGCTTTCATCCACGGCCTGCGGACTACT										
Mus musculus	MEEBO	ILMN_208613	ILMN_208613	MAGEA2	scl017138.3_9				21426896	NM_020016	Magea2		ILMN_1223576	002570097	S	1429	GGTCCAATAGTTTTAGCTTTAAATGCATGTAGTGTTTTTTTCAGGTTTGC										
Mus musculus	Riken	ILMN_205940	ILMN_205940	C130054P18RIK	ri|C130054P18|PX00169P16|AK048388|4229					AK048388	C130054P18Rik		ILMN_1223503	003290626	S	3437	CTACTAAGTCAGGGTTAGGGGCATGAATCGTCTCCGTCCACACTCACAGG										
Mus musculus	RefSeq	ILMN_195203	ILMN_195203	VTN	NM_011707.1	NM_011707.1		22370	6755986	NM_011707.1	Vtn	NP_035837.1	ILMN_1234111	006770671	S	1412	TAGAACCCGGCGAGTGGACTCTGTGAATCCTCCCTACCCACGCTCCATTG	11	+	78313715-78313763:78313886-78313886	11qB5	Mus musculus vitronectin (Vtn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IDA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Vn; AI256434	Vn; AI256434
Mus musculus	Riken	ILMN_206486	ILMN_206486	D430021P20RIK	ri|D430021P20|PX00194K01|AK084991|3702					AK084991	D430021P20Rik		ILMN_1238975	002850343	S	3576	AGGAAATACAAAAGGGCGGTGTGCAGTATGTGCAGCTCAGTAGCAGGCCG										
Mus musculus	Riken	ILMN_203898	ILMN_203898	GGCX	ri|5730598G08|PX00093K04|AK030779|2274					AK030779	Ggcx		ILMN_1226632	004540768	S	2149	CCCAAGTGGGAGGATTAAAGGAACAAGCTGCCATCACCACCAGGCAAAGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase [goid 17187] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA];  [goid 8488] [evidence ISS]		
Mus musculus	RefSeq	ILMN_222887	ILMN_222887	PHYH	NM_010726.1	NM_010726.1		16922	6754563	NM_010726.1	Phyh	NP_034856.1	ILMN_2756238	004830095	S	1356	AGTGAAATATTACTGTTTTAAGAAAAACTAACCTAGGGTGTAACTAATAA	2	+	4859706-4859755	2qA1	Mus musculus phytanoyl-CoA hydroxylase (Phyh), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway [goid 1561] [evidence IDA]	Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: phytanoyl-CoA + 2-oxoglutarate + O2 = 2-hydroxyphytanoyl-CoA + succinate + CO2 [goid 48244] [evidence IEA]	AI256161; PAHX; AI265699; Lnap1	AI256161; PAHX; AI265699; Lnap1
Mus musculus	RefSeq	ILMN_196609	ILMN_196609	EXOSC2	NM_144886.2	NM_144886.2		227715	142386116	NM_144886.2	Exosc2	NP_659135.1	ILMN_2683326	003990523	S	898	AAGGATGGGACTGGGCACCCCCTGGGCCAGTTTTGGGAGTGAAAACTCTG	2	+	31536103-31536152	2qB	Mus musculus exosome component 2 (Exosc2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Complex of 3'-5' exoribonucleases [goid 178] [evidence ISO]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC30456; Rrp4	MGC30456; Rrp4
Mus musculus	RefSeq	ILMN_219163	ILMN_219163	DEADC1	NM_025748.3	NM_025748.3		66757	61098159	NM_025748.3	Deadc1	NP_080024.3	ILMN_2705097	002810139	S	706	ACCGAGAGCCGCTGACGTCGCTGGTCACGTTTATATGTTATTACTGTGTG	10	+	13282765-13282814	10qA2	Mus musculus deaminase domain containing 1 (Deadc1), mRNA.				4933426M09Rik	4933426M09Rik
Mus musculus	Riken	ILMN_203523	ILMN_203523	4732435K05RIK	ri|4732435K05|PX00050P18|AK028687|4162					AK028687	4732435K05Rik		ILMN_2557957	001990524	S	3896	TGGCCTTGGCAGTTTTCATGGACAATGTCTGCCCAACTTCTGAAGAGCTG										
Mus musculus	RefSeq	ILMN_239323	ILMN_239323	CENTG1	NM_001033263.1	NM_001033263.1		216439	84370299	NM_001033263.1	Centg1	NP_001028435.1	ILMN_3048728	006350278	I	5359	CTTTAAGGTCCTGGCCCCCATCCCCAGAAAGGGAGAGGTGGTGTGGACTT	10	+	126495844-126495893	10qD3	Mus musculus centaurin, gamma 1 (Centg1), mRNA.				mKIAA0167	mKIAA0167
Mus musculus	RefSeq	ILMN_239323	ILMN_239323	CENTG1	NM_001033263.1	NM_001033263.1		216439	84370299	NM_001033263.1	Centg1	NP_001028435.1	ILMN_3124601	001300431	A	3382	TTGAGGAGCGGGATGCTTGGGTTCAGGCCATTGAGAGTCAGATCCTGGCC	10	+	126493443-126493492	10qD3	Mus musculus centaurin, gamma 1 (Centg1), mRNA.				mKIAA0167	mKIAA0167
Mus musculus	RefSeq	ILMN_214921	ILMN_214921	MCM2	NM_008564.1	NM_008564.1		17216	6678825	NM_008564.1	Mcm2	NP_032590.1	ILMN_1250907	001770612	S	2872	GGCTTAATGCAGACCTTTACCTGTGAGCCCCTAGGCCAAGGCTGTAGCAT	6	-	88833837-88833886	6qD1	Mus musculus minichromosome maintenance deficient 2 mitotin (S. cerevisiae) (Mcm2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence TAS]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IDA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally [goid 3688] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	CDCL1; Mcmd2; BM28; AA959861; mKIAA0030; AW476101	CDCL1; Mcmd2; BM28; AA959861; mKIAA0030; AW476101
Mus musculus	RefSeq	ILMN_220735	ILMN_220735	APCDD1	NM_133237.2	NM_133237.2		494504	110625863	NM_133237.2	Apcdd1	NP_573500.2	ILMN_2965660	002850451	S	2721	CTCCAAGTGAACCAATCCCCTGTGTCCTGGCTCACACTGTGGTTAGGGTG				18qE1	Mus musculus adenomatosis polyposis coli down-regulated 1 (Apcdd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AB023957; EIG180; Drapc1; AU041258	AB023957; EIG180; Drapc1; AU041258
Mus musculus	RefSeq	ILMN_214216	ILMN_214216	CC2D1A	NM_145970.1	NM_145970.1		212139	22122408	NM_145970.1	Cc2d1a	NP_666082.2	ILMN_2645613	003170152	S	3223	TACTGACCCAGCTGCCCTCACCCCAGGGCCAACACAGAATGAACAGCCAA	8	-	86656742-86656791	8qC3	Mus musculus coiled-coil and C2 domain containing 1A (Cc2d1a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC27560; BC016188; MGC38983; Freud-1	MGC27560; BC016188; MGC38983; Freud-1
Mus musculus	RefSeq	ILMN_212881	ILMN_212881	NAGA	NM_008669.3	NM_008669.3		17939	142365334	NM_008669.3	Naga	NP_032695.2	ILMN_1248289	000240523	S	1481	CCCCCAAAGTGCATTTGCAGGGCCCAGGTTCAATGCCAGGTCCAGCTGAA	15	-	82160324-82160373	15qE1	Mus musculus N-acetyl galactosaminidase, alpha (Naga), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D-galactosaminides [goid 8456] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209023	ILMN_209023	IL15RA	NM_133836.1	NM_133836.1		16169	19745159	NM_133836.1	Il15ra	NP_598597.1	ILMN_1220603	004540403	S	809	CCAGCTGCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTC	2	+	11654947-11654996	2qA1	Mus musculus interleukin 15 receptor, alpha chain (Il15ra), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA690181	AA690181
Mus musculus	RefSeq	ILMN_209023	ILMN_209023	IL15RA	NM_133836.1	NM_133836.1		16169	19745159	NM_133836.1	Il15ra	NP_598597.1	ILMN_1227502	005360678	S	255	CACTACAGTCCAGTGCCAACAGTAGTGACACCAAAGGTGACCTCACAGCC	2	+	11641656-11641705	2qA1	Mus musculus interleukin 15 receptor, alpha chain (Il15ra), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA690181	AA690181
Mus musculus	RefSeq	ILMN_209023	ILMN_209023	IL15RA	NM_133836.1	NM_133836.1		16169	19745159	NM_133836.1	Il15ra	NP_598597.1	ILMN_1249759	006650142	S	812	GCTGCGCCTGGACACAGGAGAAAGCCCAATGTGATAATAGAGGTCTCTGG	2	+	11654950-11654999	2qA1	Mus musculus interleukin 15 receptor, alpha chain (Il15ra), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA690181	AA690181
Mus musculus	RefSeq	ILMN_219943	ILMN_219943	PCMTD1	NM_183028.3	NM_183028.3		319263	145699128	NM_183028.3	Pcmtd1	NP_898849.1	ILMN_1256175	000290754	S	2330	CTGCTTAGGGACCTCCAGCAGCAGGGGGAATGATATGATCAGTAGAGACA				1qA1	Mus musculus protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 (Pcmtd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester [goid 4719] [evidence IEA]	MGC117877; A030012M09Rik; 8430411F12Rik	MGC117877; A030012M09Rik; 8430411F12Rik
Mus musculus	RefSeq	ILMN_219943	ILMN_219943	PCMTD1	NM_183028.3	NM_183028.3		319263	145699128	NM_183028.3	Pcmtd1	NP_898849.1	ILMN_1218131	002360196	S	2345	CAGCAGCAGGGGGAATGATATGATCAGTAGAGACATTTTAGCAGTGGAAC				1qA1	Mus musculus protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 (Pcmtd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester [goid 4719] [evidence IEA]	MGC117877; A030012M09Rik; 8430411F12Rik	MGC117877; A030012M09Rik; 8430411F12Rik
Mus musculus	Riken	ILMN_201816	ILMN_201816	MAP2K5	ri|3000002B10|ZX00055G08|AK013856|1294					AK013856	Map2k5		ILMN_1255010	000240452	S	1066	CCTGAGACATTTTCTGGAGCCTGCCCCCTCTAATATTCCGTTAAGGAGCC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IDA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221463	ILMN_221463	RPLP0	NM_007475.4	NM_007475.4		11837	145966895	NM_007475.4	Rplp0	NP_031501.1	ILMN_1249815	005570093	S	1099	CTCCGGTCTGGATTTATTTAGTTTGTTCACTTAAGCAGGATGAAAAAGCA				5qF	Mus musculus ribosomal protein, large, P0 (Rplp0), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC107166; 36B4; MGC107165	MGC107166; 36B4; MGC107165
Mus musculus	RefSeq	ILMN_221463	ILMN_221463	RPLP0	NM_007475.4	NM_007475.4		11837	145966895	NM_007475.4	Rplp0	NP_031501.1	ILMN_2744356	001340246	S	1243	CTTGACTTGGTGCCATAGCTAGTCTGGGACAAAGATTTTCCAGGTGTGAA				5qF	Mus musculus ribosomal protein, large, P0 (Rplp0), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC107166; 36B4; MGC107165	MGC107166; 36B4; MGC107165
Mus musculus	RefSeq	ILMN_212416	ILMN_212416	SVS3A	NM_021363.1	NM_021363.1		64335	10946689	NM_021363.1	Svs3a	NP_067338.1	ILMN_1227232	005080576	S	1079	CAAATGATCAACTCACACTGAAACATCCGTACACTCTTGTAGTGTTACAC	2	+	164117130-164117179	2qH3	Mus musculus seminal vesicle secretion 3A (Svs3a), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IC ]	The deposition of a plug of sperm or other gelatinous material into the opening of the vulva by a male at the termination of copulation. Probably acts to prevent subsequent matings by other males [goid 42628] [evidence IDA]		Svp-3; Svp3; BB121242; Svs3; Semg2; 9530026M05Rik	Svp-3; Svp3; BB121242; Svs3; Semg2; 9530026M05Rik
Mus musculus	RefSeq	ILMN_209493	ILMN_209493	D6WSU163E	NM_138594.3	NM_138594.3		28040	142372851	NM_138594.3	D6Wsu163e	NP_613060.1	ILMN_2596324	004010129	S	1699	CGGGTCTCCTCAACACTCACGCTGACATCCAAGCACTAACTCATAGACGG	6	+	126925183-126925221:126925222-126925232	6qF3	Mus musculus DNA segment, Chr 6, Wayne State University 163, expressed (D6Wsu163e), mRNA.				C12orf4	C12orf4
Mus musculus	RefSeq	ILMN_209493	ILMN_209493	D6WSU163E	NM_138594.3	NM_138594.3		28040	142372851	NM_138594.3	D6Wsu163e	NP_613060.1	ILMN_1224433	003460068	S	850	GACGCTGCTGGGAGGATCTACGAGGAACAGAGGAAGCTGGAGGAGAGCTT	6	+	126904796-126904845	6qF3	Mus musculus DNA segment, Chr 6, Wayne State University 163, expressed (D6Wsu163e), mRNA.				C12orf4	C12orf4
Mus musculus	RefSeq	ILMN_215005	ILMN_215005	KBTBD2	NM_145958.1	NM_145958.1		210973	22122390	NM_145958.1	Kbtbd2	NP_666070.1	ILMN_2824593	004830021	S	2374	ACGTTGGCTCATGCATATAACCACCTGCTGCTGATGTACTTCTCCATCTT	6	-	56727880-56727929	6qB3	Mus musculus kelch repeat and BTB (POZ) domain containing 2 (Kbtbd2), mRNA.				MGC36672; Bklhd1; BC022962; mKIAA1489	MGC36672; Bklhd1; BC022962; mKIAA1489
Mus musculus	RefSeq	ILMN_215005	ILMN_215005	KBTBD2	NM_145958.1	NM_145958.1		210973	22122390	NM_145958.1	Kbtbd2	NP_666070.1	ILMN_2654442	002370301	S	2282	TGCTGGGCTTGCAAATGAATTGCTAGTCCCTCATTGTGCGGGTCTATGTG	6	-	56727972-56728021	6qB3	Mus musculus kelch repeat and BTB (POZ) domain containing 2 (Kbtbd2), mRNA.				MGC36672; Bklhd1; BC022962; mKIAA1489	MGC36672; Bklhd1; BC022962; mKIAA1489
Mus musculus	RefSeq	ILMN_218958	ILMN_320123	HTR3A	NM_001099644.1	NM_001099644.1		15561	153791844	NM_001099644.1	Htr3a	NP_001093114.1	ILMN_2702403	004070608	S	1499	CAGGCTGCTGTTCCGCATCTACCTGCTGGCTGTGCTCGCTTACAGCATCA				9qA5.3	Mus musculus 5-hydroxytryptamine (serotonin) receptor 3A (Htr3a), transcript variant 2, mRNA.	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 51378] [evidence ISO]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence ISO]	5-HT3	5-HT3
Mus musculus	MEEBO	ILMN_224187	ILMN_224187	RBP2	scl36581.4.1_1				31982060	NM_009034	Rbp2		ILMN_2776265	003780201	S	322	CTGGGAAGGCAACACCCTCGTGTGTGTGCAGAAAGGGGAGAAGGAGAACC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 1523] [evidence TAS]	Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 5501] [evidence TAS]		
Mus musculus	RefSeq	ILMN_214243	ILMN_214243	2810022L02RIK	NM_144882.3	NM_144882.3		67198	141801973	NM_144882.3	2810022L02Rik	NP_659131.1	ILMN_2645865	002690446	S	3739	GACCTGATCACATTGTTTCCTAGACTTTAGCCTTAGACTCTGGCATGTGA	1	+	58005115-58005164	1qC1.3	Mus musculus RIKEN cDNA 2810022L02 gene (2810022L02Rik), mRNA.				AA987173; AI842453; AI480531; AW413586; A230104H11Rik	AA987173; AI842453; AI480531; AW413586; A230104H11Rik
Mus musculus	RefSeq	ILMN_214243	ILMN_214243	2810022L02RIK	NM_144882.3	NM_144882.3		67198	141801973	NM_144882.3	2810022L02Rik	NP_659131.1	ILMN_2673917	005560370	S	2286	GGAACTCTTGGTCAGACAAACGTGATCAGCTGAAACACGTGTGCTTTTGT	1	+	58003662-58003711	1qC1.3	Mus musculus RIKEN cDNA 2810022L02 gene (2810022L02Rik), mRNA.				AA987173; AI842453; AI480531; AW413586; A230104H11Rik	AA987173; AI842453; AI480531; AW413586; A230104H11Rik
Mus musculus	RefSeq	ILMN_214243	ILMN_214243	2810022L02RIK	NM_144882.3	NM_144882.3		67198	141801973	NM_144882.3	2810022L02Rik	NP_659131.1	ILMN_2686003	004480608	S	821	GCCTAAGGCAAAAACATCTCCTGTTAAGTCCAATGCCCCTGCAGCTCATC	1	+	57957599-57957648	1qC1.3	Mus musculus RIKEN cDNA 2810022L02 gene (2810022L02Rik), mRNA.				AA987173; AI842453; AI480531; AW413586; A230104H11Rik	AA987173; AI842453; AI480531; AW413586; A230104H11Rik
Mus musculus	RefSeq	ILMN_217534	ILMN_217534	LRRC24	NM_198119.2	NM_198119.2		378937	142375956	NM_198119.2	Lrrc24	NP_932787.1	ILMN_2684397	005050156	S	1753	GGCTCAAGTCTGGGCTACGCCTCCCTACACGTGTGGCCTATGAGATCCAT	15	-	76545807-76545856	15qD3	Mus musculus leucine rich repeat containing 24 (Lrrc24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6430402H13Rik	6430402H13Rik
Mus musculus	RefSeq	ILMN_184619	ILMN_227317	TPCN2	NM_146206.4	NM_146206.4		233979	146149208	NM_146206.4	Tpcn2	NP_666318.2	ILMN_1236133	002190364	S	2536	CAGCTCTCCTTGATACCCACAAACTTATCTGTGCCTTCAGCCTCAGTGGC				7qF5	Mus musculus two pore segment channel 2 (Tpcn2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]	MGC32411; D830047E22Rik; BC025890	MGC32411; D830047E22Rik; BC025890
Mus musculus	RefSeq	ILMN_221702	ILMN_221702	5830433M19RIK	NM_026368.1	NM_026368.1		67770	23956173	NM_026368.1	5830433M19Rik	NP_080644.1	ILMN_1217473	002600609	S	1637	TCCTAGCGAAACCTAATGAACTGTTTTGTTGTAAGGCTCAGAGATCGAAC	4	-	94167180-94167229	4qC5	Mus musculus RIKEN cDNA 5830433M19 gene (5830433M19Rik), mRNA.				AI536248	AI536248
Mus musculus	MEEBO	ILMN_193412	ILMN_193412	C230060L03RIK	scl39561.1.345_162						C230060L03Rik		ILMN_2496925	004610523	S	19	CTGAGCTTTTTATGCAAGTTAGCATTCAAGCTAAATCTTTCAACACTCGG										
Mus musculus	RefSeq	ILMN_184676	ILMN_241578	WSCD2	NM_177292.2	NM_177292.2		320916	31343262	NM_177292.2	Wscd2	NP_796266.1	ILMN_2667055	000360619	S	4104	CCATTGAGCGGCTGCTGTGGGCTGGACCGTGTAGGGTTGATTCATTGCTT	5	+	114004344-114004393	5qF	Mus musculus WSC domain containing 2 (Wscd2), mRNA.				C530024P05Rik	C530024P05Rik
Mus musculus	RefSeq	ILMN_223602	ILMN_223602	SVS7	NM_020264.1	NM_020264.1		56872	9931972	NM_020264.1	Svs7	NP_064660.1	ILMN_2797040	002000347	S	391	CCATGATGGCCTGAGATCCCTGAGATAGCAACAGAGGCTGTGTCCTCGTT	9	-	35357300-35357349	9qA4	Mus musculus seminal vesicle protein, secretion 7 (Svs7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	9530004K16Rik	9530004K16Rik
Mus musculus	RefSeq	ILMN_197866	ILMN_318136	OTTMUSG00000010552	NM_001085541.1	NM_001085541.1		626995	147905914	NM_001085541.1	OTTMUSG00000010552	NP_001079010.1	ILMN_1215695	006510646	S	1326	AAGACGGCCCAAGTCAGTCTGTTTTGGTACCTATTCCTGTTATGACTGTG				4qE1	Mus musculus predicted gene, OTTMUSG00000010552 (OTTMUSG00000010552), mRNA.					
Mus musculus	RefSeq	ILMN_194409	ILMN_194409	TRPV2	NM_011706.1	NM_011706.1		22368	7106444	NM_011706.1	Trpv2	NP_035836.1	ILMN_2837779	001690382	S	2542	GCGCTGGTGCTTCAGGGTGGAGGAAGTAAACTGGGCTGCATGGGAGAAGA	11	+	62416343-62416392	11qB2	Mus musculus transient receptor potential cation channel, subfamily V, member 2 (Trpv2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [evidence ISO]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence ISO]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IDA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IDA]	Vrl1; GRC; VRL-1; OTRPC2	Vrl1; GRC; VRL-1; OTRPC2
Mus musculus	RefSeq	ILMN_208780	ILMN_208780	RNF41	NM_026259.2	NM_026259.2		67588	31543596	NM_026259.2	Rnf41	NP_080535.2	ILMN_1250630	004210465	S	1172	GATGAACCGGCGCTACTATGAGAACTACGTGGCCAAGCGCATCCCTGGCA	10	+	127867100-127867130:127868015-127868033	10qD3	Mus musculus ring finger protein 41 (Rnf41), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4933415P08Rik; Nrdp1; 2210404G21Rik; 4930511A05Rik; D10Ertd722e; FLRF	4933415P08Rik; Nrdp1; 2210404G21Rik; 4930511A05Rik; D10Ertd722e; FLRF
Mus musculus	RefSeq	ILMN_208780	ILMN_208780	RNF41	NM_026259.2	NM_026259.2		67588	31543596	NM_026259.2	Rnf41	NP_080535.2	ILMN_2589433	005310070	S	1171	AGATGAACCGGCGCTACTATGAGAACTACGTGGCCAAGCGCATCCCTGGC	10	+	127867099-127867130:127868015-127868032	10qD3	Mus musculus ring finger protein 41 (Rnf41), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4933415P08Rik; Nrdp1; 2210404G21Rik; 4930511A05Rik; D10Ertd722e; FLRF	4933415P08Rik; Nrdp1; 2210404G21Rik; 4930511A05Rik; D10Ertd722e; FLRF
Mus musculus	RefSeq	ILMN_208780	ILMN_208780	RNF41	NM_026259.2	NM_026259.2		67588	31543596	NM_026259.2	Rnf41	NP_080535.2	ILMN_3004302	006900528	S	3063	GTTGCCCACAGAGTCTAGAAAAGAGCACTGGGTCTCCTAGAACTGGAGTC	10	+	127872316-127872365	10qD3	Mus musculus ring finger protein 41 (Rnf41), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	4933415P08Rik; Nrdp1; 2210404G21Rik; 4930511A05Rik; D10Ertd722e; FLRF	4933415P08Rik; Nrdp1; 2210404G21Rik; 4930511A05Rik; D10Ertd722e; FLRF
Mus musculus	RefSeq	ILMN_220476	ILMN_220476	PRPS1L1	NM_029294.2	NM_029294.2		75456	141803280	NM_029294.2	Prps1l1	NP_083570.1	ILMN_1221385	004830722	S	1042	CGGAGAATCTGTTTCCTACCTGTTCAGTCACGTACCCTTGTAATGCAGTG	12	+	35670474-35670516:35670517-35670523	12qA3	Mus musculus phosphoribosyl pyrophosphate synthetase 1-like 1 (Prps1l1), mRNA.		The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC130375; 1700011K15Rik	MGC130375; 1700011K15Rik
Mus musculus	RefSeq	ILMN_201395	ILMN_201395	LOC385087	XM_358045.1	XM_358045.1			38093470	XM_358045.1	LOC385087		ILMN_1242673	003800241	S	275	ACCAAGCCAGCGGCCTCAACAACGTCCCTTACTCCGCCAAGAGCAGCTAT										
Mus musculus	RefSeq	ILMN_221386	ILMN_221386	OLFML1	NM_172907.2	NM_172907.2		244198	31982547	NM_172907.2	Olfml1	NP_766495.1	ILMN_1219253	004780020	S	1588	GGTCACAGCCCCTTTATAGTGGAGTATCTGGCCCTCTCGATGCACATAGG	7	+	114734511-114734560	7qE3	Mus musculus olfactomedin-like 1 (Olfml1), mRNA.				MGC56882; ONT2; mONT2; 6720478C22; MVAL564; BC047207	MGC56882; ONT2; mONT2; 6720478C22; MVAL564; BC047207
Mus musculus	RefSeq	ILMN_200685	ILMN_200685	LOC384482	XM_357669.1	XM_357669.1			38085128	XM_357669.1	LOC384482		ILMN_2539642	002350437	S	148	CACCGCCGCTGCTGCCAACAGAAGAGCTATGAAACATCCTGGAGGACCTA										
Mus musculus	RefSeq	ILMN_209804	ILMN_209804	4930547C10RIK	NM_026652.1	NM_026652.1		68274	13386139	NM_026652.1	4930547C10Rik	NP_080928.1	ILMN_2806907	005560136	S	2288	GGGTACACAAACCACAGCAGAATTCAGGGATGACTTGGGGGATCTCGAGG	4	+	52633150-52633199	4qB2	Mus musculus RIKEN cDNA 4930547C10 gene (4930547C10Rik), mRNA.					
Mus musculus	RefSeq	ILMN_188163	ILMN_237946	A930041I02RIK	NM_178778.3	NM_178778.3		320271	86198338	NM_178778.3	A930041I02Rik	NP_848893.2	ILMN_2450312	003440113	S	3687	GCGACTCGGTTAAGATCCTATTCCTGTTTGTGATTCTACAGTTTGGAACA	2	-	38928702-38928751	2qB	Mus musculus RIKEN cDNA A930041I02 gene (A930041I02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI662729; 9330112M16	AI662729; 9330112M16
Mus musculus	RefSeq	ILMN_188163	ILMN_237946	A930041I02RIK	NM_178778.3	NM_178778.3		320271	86198338	NM_178778.3	A930041I02Rik	NP_848893.2	ILMN_1229810	000270307	S	2745	CAAGGCATGGATGTTAGAGAGACTCTGTGTGAGTTGAGGATAACTGGGTG	2	-	38929644-38929693	2qB	Mus musculus RIKEN cDNA A930041I02 gene (A930041I02Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AI662729; 9330112M16	AI662729; 9330112M16
Mus musculus	RefSeq	ILMN_210331	ILMN_210331	CLEC1A	NM_175526.2	NM_175526.2		243653	142356146	NM_175526.2	Clec1a	NP_780735.1	ILMN_2604501	000990494	S	1034	GCTGGGGCTGGTATGTGAGAGGTTTTCCTGGTTCTAGCTCAGCATCATCC	6	-	129378707-129378756	6qF3	Mus musculus C-type lectin domain family 1, member a (Clec1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5930406N14Rik	5930406N14Rik
Mus musculus	RefSeq	ILMN_210331	ILMN_210331	CLEC1A	NM_175526.2	NM_175526.2		243653	142356146	NM_175526.2	Clec1a	NP_780735.1	ILMN_2703231	002360326	S	2852	TCTCATAATGTAGGTTGTAATATAAAATGTGTTGAAAATTAAGAAAATAT	6	-	129376889-129376938	6qF3	Mus musculus C-type lectin domain family 1, member a (Clec1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5930406N14Rik	5930406N14Rik
Mus musculus	RefSeq	ILMN_210331	ILMN_210331	CLEC1A	NM_175526.2	NM_175526.2		243653	142356146	NM_175526.2	Clec1a	NP_780735.1	ILMN_2732090	006510519	S	235	TTCAGTTTGGCGCCCAGTGGCCCTGACCCTGCTGACCTTGTGTTTGGTGC	6	-	129386964-129387013	6qF3	Mus musculus C-type lectin domain family 1, member a (Clec1a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	5930406N14Rik	5930406N14Rik
Mus musculus	RefSeq	ILMN_214422	ILMN_214422	D330045A20RIK	NM_175326.2	NM_175326.2		102871	31341607	NM_175326.2	D330045A20Rik	NP_780535.1	ILMN_2781520	004560040	S	3502	GCTGTACAGTTTTAATGTGGTGAGCAGCCTAAGAACTTAAAGGTGTACGG	X	+	134900784-134900833	XqF1	Mus musculus RIKEN cDNA D330045A20 gene (D330045A20Rik), mRNA.				AI132325; RP23-219K12.1	AI132325; RP23-219K12.1
Mus musculus	RefSeq	ILMN_214422	ILMN_214422	D330045A20RIK	NM_175326.2	NM_175326.2		102871	31341607	NM_175326.2	D330045A20Rik	NP_780535.1	ILMN_2647856	001450377	S	2251	GCCCCCCAAACTTGATGAATTTCAGAGCGCCCGAAGCCTTGGACATTTTG	X	+	134889525-134889574	XqF1	Mus musculus RIKEN cDNA D330045A20 gene (D330045A20Rik), mRNA.				AI132325; RP23-219K12.1	AI132325; RP23-219K12.1
Mus musculus	RefSeq	ILMN_199808	ILMN_256287	EG631797	XM_977315.1	XM_977315.1		631797	94398665	XM_977315.1	EG631797	XP_982409.2	ILMN_1253802	003290274	S	5166	CCGGCCGTGCTGGTGCTGCAGGTCTGGGATTTTGAAAGACTGTCCTCAGA	15	+	58478652-58478701	15qD1	PREDICTED: Mus musculus predicted gene, EG631797 (EG631797), mRNA.					
Mus musculus	RefSeq	ILMN_197703	ILMN_256287	EG631797	XM_977315.1	XM_977315.1		631797	94398665	XM_977315.1	EG631797	XP_982409.2	ILMN_1213479	002940709	S	5422	CAGCAGAAGAAGCCGAGAAAAACCCTGTTGGGAAAGCCCGGAAGGAGCCC	15	+	58492339-58492388	15qD1	PREDICTED: Mus musculus predicted gene, EG631797 (EG631797), mRNA.					
Mus musculus	RefSeq	ILMN_216686	ILMN_216686	TMEM128	NM_025480.3	NM_025480.3		66309	142354700	NM_025480.3	Tmem128	NP_079756.2	ILMN_2674032	000990743	S	612	CGCAGTGAGTTGTTCCATGGAGAAACTGTGACTCTCTAGATCTGCTGTCG	5	+	38660384-38660433	5qB3	Mus musculus transmembrane protein 128 (Tmem128), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2810021O14Rik; MGC117995	2810021O14Rik; MGC117995
Mus musculus	MEEBO	ILMN_188495	ILMN_188495	LOC330052	scl26838.2.1_23						LOC330052		ILMN_1227564	006510703	S	20	GTGAGACTCTGAAATCATCCTCTGTCACCAGGATAGCTGCTGTTTGGGGG										
Mus musculus	Riken	ILMN_204337	ILMN_204337	9930122J16RIK	ri|9930122J16|PX00062N07|AK037129|2381					AK037129	9930122J16Rik		ILMN_1227464	003440288	S	2087	GCCCATAGAGCTGTTAGTGTCAGCACAGATCCAAGTGGGTGCAACTTTGC										
Mus musculus	Riken	ILMN_203328	ILMN_203328	8030486A12RIK	ri|8030486A12|PX00104E17|AK033284|1806					AK033284	8030486A12Rik		ILMN_1223688	006590364	S	1507	GCAGAAGGGGACTCTAGGTCAAACTTGGGTATTCTTGGGAGCCCTCTGCC										
Mus musculus	RefSeq	ILMN_200835	ILMN_200835	LOC385389	XM_358219.1	XM_358219.1			38086446	XM_358219.1	LOC385389		ILMN_2540174	006960066	S	465	AACGAACCACCTGGGGAGACTCATCAGTCACATGTTAGACTCGGCACAGG										
Mus musculus	RefSeq	ILMN_188523	ILMN_228241	HECTD1	XM_974905.2	XM_974905.2		207304	149263230	XM_974905.2	Hectd1	XP_979999.2	ILMN_2453391	000650025	S	1619	GGGAAAACACCATTGGATAAAGCTCGAGAAAGAGGCCACAGTGAAGTAGT	12	-	52899660-52899709	12qC1	PREDICTED: Mus musculus HECT domain containing 1 (Hectd1), mRNA.		The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196948	ILMN_228241	HECTD1	XM_974905.2	XM_974905.2		207304	149263230	XM_974905.2	Hectd1	XP_979999.2	ILMN_1237821	005420750	S	8706	TATTAAGGGAGGGGCAGACACTGGCCTAGGTGCAAGGCACACTCACAGCG	12	-	52844826-52844875	12qC1	PREDICTED: Mus musculus HECT domain containing 1 (Hectd1), mRNA.		The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209562	ILMN_209562	LYPD6B	NM_027990.3	NM_027990.3		71897	146141198	NM_027990.3	Lypd6b	NP_082266.1	ILMN_2596998	000110326	S	2112	GTTGGGGATAGGGTGCAAACCTTTGAGTTAGACAGTGTAATGCATGCTGC				2qC1.1	Mus musculus LY6/PLAUR domain containing 6B (Lypd6b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			RP23-190C17.1; MGC143485; AW049525	RP23-190C17.1; MGC143485; AW049525
Mus musculus	RefSeq	ILMN_229562	ILMN_229562	MORF4L1	NM_024431.2	NM_024431.2		21761	85540469	NM_024431.2	Morf4l1	NP_077751.1	ILMN_3123716	004860086	A	1116	ATTATGAAGTGGCCCCTCCTGAGTACCACCGGAAAGCCGTGTGAGGGCGT	9	-	89987149-89987155:89987156-89987198	9qE3.1	Mus musculus mortality factor 4 like 1 (Morf4l1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]	KIAA4002; mKIAA4002; TEG-189; MORFRG15; MGC102415; MGC103105; MGC118047; MRG15; Tex189	KIAA4002; mKIAA4002; TEG-189; MORFRG15; MGC102415; MGC103105; MGC118047; MRG15; Tex189
Mus musculus	RefSeq	ILMN_221648	ILMN_221648	ANKRD56	NM_175270.2	NM_175270.2		78088	31341488	NM_175270.2	Ankrd56	NP_780479.1	ILMN_2946760	000780019	S	3477	GGAAGAGGCTAATCCTTGCAGGTCCCTGGCTGAAGGTGACTCTGTGACCC	5	-	94116629-94116678	5qE2	Mus musculus ankyrin repeat domain 56 (Ankrd56), mRNA.				5730467H21Rik	5730467H21Rik
Mus musculus	RefSeq	ILMN_200121	ILMN_250406	LOC667185	XR_001990.1	XR_001990.1		667185	94375097	XR_001990.1	LOC667185		ILMN_1254617	001710661	S	1239	GAGGGATGCTGCATCAGGGACACCTAACTTGGTCATTCCGATTTGTATCC	5	-	109806959-109807008	5qF	PREDICTED: Mus musculus similar to vomeronasal 2, receptor, 2 (LOC667185), mRNA.					
Mus musculus	RefSeq	ILMN_244505	ILMN_244505	OLFR147	NM_146869.1	NM_146869.1		258869	49170055	NM_146869.1	Olfr147	NP_667080.1	ILMN_2793865	002190735	S	380	TGGCCATCTGTAATCCACTGTTGTATAAGGTCACCATGTCCCCTCAGATC	9	+	38210840-38210889	9qA5.1	Mus musculus olfactory receptor 147 (Olfr147), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR164-1; M3	MOR164-1; M3
Mus musculus	RefSeq	ILMN_203029	ILMN_257969	LOC675954	XM_993345.1	XM_993345.1		675954	94402464	XM_993345.1	LOC675954	XP_998439.1	ILMN_1226643	006770181	S	2617	GCCTGAGAGCCACGTCCTTCATCACTGTGGTCGTTGGAGAAACTGAGACC					PREDICTED: Mus musculus hypothetical protein LOC675954 (LOC675954), mRNA.					
Mus musculus	MEEBO	ILMN_185687	ILMN_185687	ZDHHC14	scl00224454.2_102	NM_146073.2			24371238	NM_146073.2	Zdhhc14		ILMN_2481438	006250519	S	15	CCACCTATGAGTAGATGTCCACAGAGTTCCCCCTACACCTTGTCAACCAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_185687	ILMN_185687	ZDHHC14	scl00224454.2_102	NM_146073.2			24371238	NM_146073.2	Zdhhc14		ILMN_1242611	004010451	S	1	GCATGGTATGCCCTTAGGGTGGTCAGGTGCATAAGATCAAAGGAGCAGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_221867	ILMN_221867	UBIAD1	NM_027873.2	NM_027873.2		71707	141801778	NM_027873.2	Ubiad1	NP_082149.1	ILMN_1243170	002470270	S	2620	GGAACAGGATGTTCTTTCCTGTTCTCCCCAGCGTGCTGGGTTTGTACGTC	4	-	147808906-147808955	4qE2	Mus musculus UbiA prenyltransferase domain containing 1 (Ubiad1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]	Tere1; 1200002M06Rik; AI426463; AW320947	Tere1; 1200002M06Rik; AI426463; AW320947
Mus musculus	RefSeq	ILMN_206358	ILMN_221867	UBIAD1	NM_027873.2	NM_027873.2		71707	141801778	NM_027873.2	Ubiad1	NP_082149.1	ILMN_2579510	006760630	S	279	CAATTCTAAAAGTGAGCCACTCAAGGGGACCGCCCCAGGACGGAGACAGG	4	-	147818532-147818559:147818560-147818581	4qE2	Mus musculus UbiA prenyltransferase domain containing 1 (Ubiad1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]	Tere1; 1200002M06Rik; AI426463; AW320947	Tere1; 1200002M06Rik; AI426463; AW320947
Mus musculus	RefSeq	ILMN_199163	ILMN_199163	LOC327983	XM_282972.2	XM_282972.2			38091528	XM_282972.2	LOC327983		ILMN_1213471	005860523	S	891	GAGGGTGTTGGATCCCTAGGAACTGGAGATGCTGTCAGCTGTCATGTGGG										
Mus musculus	RefSeq	ILMN_199745	ILMN_199745	LOC386505	XM_359353.1	XM_359353.1			38076777	XM_359353.1	LOC386505		ILMN_2536332	004040300	S	277	ACATATGACAAAGGGACCACCTCCTTCCACTTACAGAAAGCCTCAGTGCA										
Mus musculus	RefSeq	ILMN_220000	ILMN_220000	2810433K01RIK	NM_025581.2	NM_025581.2		66468	31541927	NM_025581.2	2810433K01Rik	NP_079857.2	ILMN_3004797	006110035	S	2112	GCCTCCATGCAGGGACACCCCTGTCACACATCTGGCCTCAGCAACTTAGT	18	-	74321022-74321071	18qE2	Mus musculus RIKEN cDNA 2810433K01 gene (2810433K01Rik), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		AV117428	AV117428
Mus musculus	RefSeq	ILMN_200367	ILMN_200367	LOC386333	XM_359174.1	XM_359174.1			38081438	XM_359174.1	LOC386333		ILMN_1223149	004560037	S	726	TGTAGCACTCCAGAGAGCCAGCCTTGCACCTCGCCTGGGCAATAGTGGAT										
Mus musculus	RefSeq	ILMN_221287	ILMN_221287	NRM	NM_134122.2	NM_134122.2		106582	142365394	NM_134122.2	Nrm	NP_598883.1	ILMN_2733524	001410615	S	1394	GGGTTGACTCAGGGCTCCCTGCTCTCCCAAAGGATATGCGCTGCAGAAAA	17	+	36002275-36002324	17qB1	Mus musculus nurim (nuclear envelope membrane protein) (Nrm), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence TAS]; The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane [goid 5652] [evidence TAS]			AI429796	AI429796
Mus musculus	RefSeq	ILMN_199061	ILMN_199061	LOC380653	XM_354560.1	XM_354560.1			38090677	XM_354560.1	LOC380653		ILMN_2533911	006380114	S	1030	GCGAATGGTTGCATTGTGTCAGTAGGAAGCCTTTTCAACTGGATGGTGTC										
Mus musculus	Riken	ILMN_207002	ILMN_207002	6430594K11RIK	ri|6430594K11|PX00649A15|AK078317|1047					AK078317	6430594K11Rik		ILMN_1250027	001410546	S	932	CTGCCACAGACTCCCCAAGGCTGGGATTACTGACTACCACCACCTGGCTA										
Mus musculus	RefSeq	ILMN_237659	ILMN_237659	SDCBP	NM_016807.1	NM_016807.1		53378	7949149	NM_016807.1	Sdcbp	NP_058087.1	ILMN_2927025	007400358	S	1640	GTGCTAGCCCTGAGCAGCTCACTGGTAAAGCAGAGCTGCCTACTTGTATC	4	+	6322400-6322449	4qA1	Mus musculus syndecan binding protein (Sdcbp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-5 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-3 [goid 5895] [evidence IMP]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IPI]	Interacting selectively with the interleukin-5 receptor [goid 5137] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sycl	Sycl
Mus musculus	MEEBO	ILMN_187721	ILMN_187721	2810454F19RIK	scl072802.2_118						2810454F19Rik		ILMN_1255086	007040543	S	20	TATCTCTTGGACCTAACCCCACTGCAATCCAGACTTTTGTTAGCCGCCAC										
Mus musculus	RefSeq	ILMN_244686	ILMN_244686	EG434179	NM_001008427.1	NM_001008427.1		434179	56606034	NM_001008427.1	EG434179	NP_001008427.1	ILMN_2994166	001190246	S	1413	CGACCCAACAATCTTCGAATGCATGAAAGAAGACATAGTGGAGAGAAACC	7	-	49917160-49917209	7qB3	Mus musculus predicted gene, EG434179 (EG434179), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	mszf88	mszf88
Mus musculus	RefSeq	ILMN_222634	ILMN_228088	2010203O07RIK	NM_001033165.1	NM_001033165.1		72429	85701667	NM_001033165.1	2010203O07Rik	NP_001028337.1	ILMN_1233026	007380072	S	98	TCACCCAGAAGAATACTATAGCCATTACTACCACTACTACAGCAGGCGCC	4	+	59030580-59030629	4qB3	Mus musculus RIKEN cDNA 2010203O07 gene (2010203O07Rik), mRNA.				2010109C08Rik	2010109C08Rik
Mus musculus	RefSeq	ILMN_198167	ILMN_198167	EG224763	XM_139937.3	XM_139937.3		224763	149268699	XM_139937.3	EG224763	XP_139937.3	ILMN_1249920	004590309	S	377	ACGAGAGCAAGATACGCAGGGACATCGAGCTGGACCCTTTGGAGTGGAAG	17	+	37251164-37251213	17qB1	PREDICTED: Mus musculus predicted gene, EG224763 (EG224763), mRNA.					
Mus musculus	MEEBO	ILMN_186441	ILMN_186441	SCL0001978.1_6	scl0001978.1_6	AK050665.1			26341415	AK050665.1	scl0001978.1_6		ILMN_2435584	002450474	S	7	CCCAGAAACTGAAGTACAAGGCCATTAGCGACGAGCTGGACCACGCCCTC										
Mus musculus	MEEBO	ILMN_216622	ILMN_216622	SEMA3C	scl28084.18_388	NM_013657.4			46048360	NM_013657.4	Sema3c		ILMN_2673323	005700451	S	4779	CACTTTTCCTCCAAAATGTAGGTTCGTGAATAGACTTAGCATGATGAAGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence NAS]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IMP]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IMP]	Interacting selectively with semaphorin receptors [goid 30215] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200469	ILMN_316223	MUC3	XM_001478962.1	XM_001478962.1		666339	149254413	XM_001478962.1	Muc3	XP_001479012.1	ILMN_2718570	002600041	S	7971	GATCCTCGTGATCCTCCTCGTGTTCTCCATCCGCTTCAGAAAAGATGCGC				5qG2	PREDICTED: Mus musculus mucin 3, intestinal (Muc3), mRNA.	The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_200469	ILMN_316223	MUC3	XM_001478962.1	XM_001478962.1		666339	149254413	XM_001478962.1	Muc3	XP_001479012.1	ILMN_1235506	001260176	S	7253	ATGGGCCACGGTGTGAGGAACTGGTGGAGAGCGTAGAGATAGAGCCGACA				5qG2	PREDICTED: Mus musculus mucin 3, intestinal (Muc3), mRNA.	The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_205071	ILMN_205071	D330030P06RIK	ri|D330030P06|PX00192B06|AK052339|1705					AK052339	D330030P06Rik		ILMN_2569766	000990088	S	1299	GATGCTGTGCCATGCAGATTCTTTGGGGATTTTGCCAGTACAGTGGTGCC										
Mus musculus	Riken	ILMN_205535	ILMN_205535	D130066L18RIK	ri|D130066L18|PX00185I15|AK051703|1637					AK051703	D130066L18Rik		ILMN_1215857	005260068	S	1386	CCTGGACGGCAGGGGGACAGGCTCCTTTTGAAGTTACCAGGGTTTCACAG										
Mus musculus	RefSeq	ILMN_222957	ILMN_222957	SLC6A13	NM_144512.2	NM_144512.2		14412	118130003	NM_144512.2	Slc6a13	NP_653095.1	ILMN_1212645	000830445	S	1989	CTTGATGCCCCTATTCCAGGGTGGTCCACACATTGTGACGTGCCCGAATC	6	+	121287575-121287624	6qF1	Mus musculus solute carrier family 6 (neurotransmitter transporter, GABA), member 13 (Slc6a13), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + Na+(out) = gamma-aminobutyric acid(in) + Na+(in) [goid 5332] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]	Gabt3; GAT3	Gabt3; GAT3
Mus musculus	Riken	ILMN_203213	ILMN_203213	MAG	ri|B230210O06|PX00069L08|AK045564|2412					AK045564	Mag		ILMN_1241209	006110475	S	2195	GACACAGGGTCTGCATAACTAGGATGGGGTAGCGCCAGCATCCAAAGACA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_187082	ILMN_222092	NHSL1	NM_173390.3	NM_173390.3		215819	124378007	NM_173390.3	Nhsl1	NP_775566.3	ILMN_2441013	007210332	S	1260	CGGCAGCAAGCCCAGACGGTCCAGGCTGACGTGGTTCCTATAAACATAAC	10	+	18231497-18231546	10qA3	Mus musculus NHS-like 1 (Nhsl1), mRNA.				D10Bwg0940e; mKIAA1357; KIAA1357; BC013565; A730096F01; 5730409E15Rik; A630035H13Rik	D10Bwg0940e; mKIAA1357; KIAA1357; BC013565; A730096F01; 5730409E15Rik; A630035H13Rik
Mus musculus	RefSeq	ILMN_222092	ILMN_222092	NHSL1	NM_173390.3	NM_173390.3		215819	124378007	NM_173390.3	Nhsl1	NP_775566.3	ILMN_2744492	000050341	S	6675	CCTTCGAGGCTCCTCCCATCAGAATTGCAAATGTGCTTTAGAACCGGGAT	10	+	18253052-18253101	10qA3	Mus musculus NHS-like 1 (Nhsl1), mRNA.				D10Bwg0940e; mKIAA1357; KIAA1357; BC013565; A730096F01; 5730409E15Rik; A630035H13Rik	D10Bwg0940e; mKIAA1357; KIAA1357; BC013565; A730096F01; 5730409E15Rik; A630035H13Rik
Mus musculus	RefSeq	ILMN_209334	ILMN_209334	MYG1	NM_021713.2	NM_021713.2		60315	130494461	NM_021713.2	Myg1	NP_068359.1	ILMN_1225033	003310358	S	416	GAGCAGTGCGGGACTTGTCTATTTGCACTTCGGACGTAAGCTCCTGGCCC	15	+	102164690-102164739	15qF3	Mus musculus melanocyte proliferating gene 1 (Myg1), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5830429P19Rik; AI325965; Gamm1; 0610023A07Rik; 2810433J21Rik	5830429P19Rik; AI325965; Gamm1; 0610023A07Rik; 2810433J21Rik
Mus musculus	RefSeq	ILMN_209334	ILMN_209334	MYG1	NM_021713.2	NM_021713.2		60315	130494461	NM_021713.2	Myg1	NP_068359.1	ILMN_1219703	004900270	S	674	AGGGTTCAGGCGAGCAATGGACCTGGTACAAGAGGAGTTTCTGCAAAGAC	15	+	102167534-102167583	15qF3	Mus musculus melanocyte proliferating gene 1 (Myg1), mRNA.		Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	5830429P19Rik; AI325965; Gamm1; 0610023A07Rik; 2810433J21Rik	5830429P19Rik; AI325965; Gamm1; 0610023A07Rik; 2810433J21Rik
Mus musculus	MEEBO	ILMN_184676	ILMN_184676	C530024P05RIK	scl27403.16_260				31343262	NM_177292	C530024P05Rik		ILMN_2420617	002690484	S	11	GTGCCATTTCAAACTAAAAGTCCAGGTTTGTGGGAGAGAGACCTGTGCTC										
Mus musculus	RefSeq	ILMN_197727	ILMN_197727	LOC380998	XM_354909.1	XM_354909.1			38077645	XM_354909.1	LOC380998		ILMN_1244689	006520259	S	1342	TGGTTTGCTAGCAGGGGCAGTGGCTCCAGCCATCATCACAGATTGTTCTG										
Mus musculus	RefSeq	ILMN_197001	ILMN_197001	LOC209931	XM_136170.3	XM_136170.3			38073348	XM_136170.3	LOC209931		ILMN_1247824	003190475	S	3301	CCCAATGACTCTGTATCAGAAGAACAATATCACCCAAGGTGGCAGGTGGC										
Mus musculus	RefSeq	ILMN_216519	ILMN_216519	ENSMUSG00000053512	NM_019680.1	NM_019680.1		56501	9790100	NM_019680.1	ENSMUSG00000053512	NP_062654.1	ILMN_2672054	006980692	S	3287	GTGGCTCTTTGCTTTTTATTTCTGCCCATCACATCTAACCCGATTCTCGC	X	-	45766678-45766727	XqA4	Mus musculus predicted gene, ENSMUSG00000053512 (ENSMUSG00000053512), mRNA.				MGC129343; BC042423; MGC129361; Mef; AV314029	MGC129343; BC042423; MGC129361; Mef; AV314029
Mus musculus	RefSeq	ILMN_251207	ILMN_251207	TAAR7F	NM_001010839.1	NM_001010839.1		435207	58082078	NM_001010839.1	Taar7f	NP_001010839.1	ILMN_2918353	006400176	S	635	CCTGGGTCTTTATCAACTTCTCAGTATTTCTCATTCCCACCCTTGTGATG	10	+	23769950-23769999	10qA4	Mus musculus trace amine-associated receptor 7F (Taar7f), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence RCA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence RCA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with a biogenic amine to initiate a change in cell activity [goid 8227] [evidence RCA]		
Mus musculus	RefSeq	ILMN_209127	ILMN_209127	THRSP	NM_009381.2	NM_009381.2		21835	31560631	NM_009381.2	Thrsp	NP_033407.1	ILMN_1256775	006580403	S	531	AGACCTGGACAGAGGGCCTGGCCCCAGGTGGACGCGAAGGCGGCTTCCGT	7	-	104561924-104561973	7qE1	Mus musculus thyroid hormone responsive SPOT14 homolog (Rattus) (Thrsp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			S14	S14
Mus musculus	RefSeq	ILMN_195636	ILMN_224873	BDH1	NM_175177.3	NM_175177.3		71911	31982168	NM_175177.3	Bdh1	NP_780386.2	ILMN_2708928	007560075	S	79	TCAAGCCCGGAGAGATTTCCCTGGGCACTTATTACACCCTGCGGGGAGTA	16	+	31422458-31422507	16qB2	Mus musculus 3-hydroxybutyrate dehydrogenase, type 1 (Bdh1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + NADH + H+ [goid 3858] [evidence IEA]	AI327223; Bdh; 2310032J20Rik	AI327223; Bdh; 2310032J20Rik
Mus musculus	RefSeq	ILMN_195636	ILMN_224873	BDH1	NM_175177.3	NM_175177.3		71911	31982168	NM_175177.3	Bdh1	NP_780386.2	ILMN_1231553	007150243	S	1483	GCGCAGGTGGGTGGCCCTAAACCTCAGGGCCAATATGGTGCTTCTATCTA	16	+	31457369-31457418	16qB2	Mus musculus 3-hydroxybutyrate dehydrogenase, type 1 (Bdh1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + NADH + H+ [goid 3858] [evidence IEA]	AI327223; Bdh; 2310032J20Rik	AI327223; Bdh; 2310032J20Rik
Mus musculus	RefSeq	ILMN_217247	ILMN_217247	DSN1	NM_025853.1	NM_025853.1		66934	13385331	NM_025853.1	Dsn1	NP_080129.1	ILMN_2989480	002070458	S	1416	GGTGGGTTGTTGCCATAAAAGACTGACGCTAAAGTTTGTGAGTGTGGGAC	2	-	156687320-156687369	2qH1	Mus musculus DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) (Dsn1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		1700022L09Rik; AW552447	1700022L09Rik; AW552447
Mus musculus	RefSeq	ILMN_212140	ILMN_232020	GTF3C1	NM_207239.1	NM_207239.1		233863	46402234	NM_207239.1	Gtf3c1	NP_997122.1	ILMN_1243678	001070070	S	6627	CAGACTCTAGGAAGGGCTTTGTGAAGACACGTCACAGGGGTACCTGACAG	7	-	132784660-132784709	7qF3	Mus musculus general transcription factor III C 1 (Gtf3c1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	RefSeq	ILMN_212140	ILMN_232020	GTF3C1	NM_207239.1	NM_207239.1		233863	46402234	NM_207239.1	Gtf3c1	NP_997122.1	ILMN_2623172	002360546	S	392	CAGGAGCAAGTGTTTGCAGCCTCGATGTACAATGGTAGAAGCCTTCAGCA	7	-	132847345-132847394	7qF3	Mus musculus general transcription factor III C 1 (Gtf3c1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Mus musculus	MEEBO	ILMN_185690	ILMN_185690	6820402O18RIK	scl071451.1_202						6820402O18Rik		ILMN_2429178	001940601	S	20	GAGGCCAACCACCAAGCTCTCCCTGAGATTCGGGCACACTGAAGTGAACC										
Mus musculus	RefSeq	ILMN_217792	ILMN_217792	9630058J23RIK	NM_146105.3	NM_146105.3		226744	34328475	NM_146105.3	9630058J23Rik	NP_666217.2	ILMN_1213026	002100309	S	4095	GTCCCGTGTGATCTCTGATGTTGTATTTGCCTCTCAGCCACCTTGGCCAC	1	+	181557154-181557203	1qH4	Mus musculus RIKEN cDNA 9630058J23 gene (9630058J23Rik), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC31547	MGC31547
Mus musculus	MEEBO	ILMN_224127	ILMN_224127	PYCRL	scl066194.1_36				13384799	NM_025412	Pycrl		ILMN_1228613	001660682	S	983	ATAGCCCTGGACGGGAGATGTAGTGGGCAGTCCTCTAAGTGGAATGGCTA						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The removal of amino group in the presence of water [goid 9972] [evidence ISO]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: cytidine + H2O = uridine + NH3 [goid 4126] [evidence ISO]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]		
Mus musculus	RefSeq	ILMN_210677	ILMN_210677	ATL2	NM_178050.3	NM_178050.3		56298	119372303	NM_178050.3	Atl2	NP_835151.2	ILMN_1233905	003420022	S	2301	CCATCCAAAAATGTTGCCTACAGCTATGAGTTAAGAGTGTCTACAGCGTG	17	-	80248752-80248801	17qE3	Mus musculus atlastin GTPase 2 (Atl2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV334690; AA407293; 2010110I21Rik; Aip-2	AV334690; AA407293; 2010110I21Rik; Aip-2
Mus musculus	RefSeq	ILMN_215568	ILMN_210677	ATL2	NM_178050.3	NM_178050.3		56298	119372303	NM_178050.3	Atl2	NP_835151.2	ILMN_2661107	004880008	S	1353	GCTGTCTTATGCAACCTCGTCATGGGGCTAGCACTGACGTCCCTTTGTAC	17	-	80251946-80251995	17qE3	Mus musculus atlastin GTPase 2 (Atl2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV334690; AA407293; 2010110I21Rik; Aip-2	AV334690; AA407293; 2010110I21Rik; Aip-2
Mus musculus	RefSeq	ILMN_211758	ILMN_211758	TMEM74	NM_175502.2	NM_175502.2		239408	31342037	NM_175502.2	Tmem74	NP_780711.1	ILMN_2901882	001690309	S	1016	CAGAAGCCACATCTTCAGGGAAGTCTGTAGACTATGGTTTCATCAGCGCT	15	-	43697175-43697224	15qB3.2	Mus musculus transmembrane protein 74 (Tmem74), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA549547; B230382K22Rik	AA549547; B230382K22Rik
Mus musculus	RefSeq	ILMN_221896	ILMN_221896	LSM2	NM_030597.2	NM_030597.2		27756	40254136	NM_030597.2	Lsm2	NP_085100.1	ILMN_2741726	006480520	S	430	CGCTATGTGCAGCTGCCAGCAGATGAGGTGGACACACAACTGCTACAGGA	17	+	35120152-35120201	17qB1	Mus musculus LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A complex composed of three small nuclear ribonucleoproteins, snRNP U4, snRNP U6 and snRNP U5 [goid 46540] [evidence ISO]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence ISO]; The formation of a tri-snRNP complex containing U4 and U6 (or U4atac and U6atac) snRNAs and U5 snRNAs and associated proteins. This includes reannealing of U4 and U6 (or U4atac and U6atac) snRNAs released from previous rounds of splicing to reform the U4/U6 snRNP (or U4atac/U6atac snRNP) as well as the subsequent association of the U5 snRNP with the U4/U6 snRNP (or U4atac/U6atac snRNP) to form a tri-snRNP that is ready to reassemble into another spliceosome complex [goid 244] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]	SmX5; D17H6S56E-2; G7b; snRNP; Dmapl; D17H6S56E2; Sm-X5; MGC13889; Dmpkap	SmX5; D17H6S56E-2; G7b; snRNP; Dmapl; D17H6S56E2; Sm-X5; MGC13889; Dmpkap
Mus musculus	RefSeq	ILMN_221896	ILMN_221896	LSM2	NM_030597.2	NM_030597.2		27756	40254136	NM_030597.2	Lsm2	NP_085100.1	ILMN_2800151	006650201	S	812	GAGGGATGGAAAGATCTGTCCCGCATCGGGAATAAAACTTATGATGCAAG	17	+	35122484-35122487:35122488-35122533	17qB1	Mus musculus LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A complex composed of three small nuclear ribonucleoproteins, snRNP U4, snRNP U6 and snRNP U5 [goid 46540] [evidence ISO]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence ISO]; The formation of a tri-snRNP complex containing U4 and U6 (or U4atac and U6atac) snRNAs and U5 snRNAs and associated proteins. This includes reannealing of U4 and U6 (or U4atac and U6atac) snRNAs released from previous rounds of splicing to reform the U4/U6 snRNP (or U4atac/U6atac snRNP) as well as the subsequent association of the U5 snRNP with the U4/U6 snRNP (or U4atac/U6atac snRNP) to form a tri-snRNP that is ready to reassemble into another spliceosome complex [goid 244] [evidence ISO]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]	SmX5; D17H6S56E-2; G7b; snRNP; Dmapl; D17H6S56E2; Sm-X5; MGC13889; Dmpkap	SmX5; D17H6S56E-2; G7b; snRNP; Dmapl; D17H6S56E2; Sm-X5; MGC13889; Dmpkap
Mus musculus	RefSeq	ILMN_223132	ILMN_223132	LRRN1	NM_008516.2	NM_008516.2		16979	142365188	NM_008516.2	Lrrn1	NP_032542.1	ILMN_2759736	000430008	S	3268	CGGCCTCTCAACAGCTAACATAGGGTTTGGAAGCAGCATTAGATCCTTTG	6	+	107519791-107519840	6qE1	Mus musculus leucine rich repeat protein 1, neuronal (Lrrn1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810047E21Rik; NLRR-1	2810047E21Rik; NLRR-1
Mus musculus	Riken	ILMN_206022	ILMN_206022	C230089D15RIK	ri|C230089D15|PX00177C02|AK048991|1709					AK048991	C230089D15Rik		ILMN_1255079	001340605	S	1609	GGCTCCTGGTGAGCCAAGGACCAGGATTAGGTTGTAGTAAAGCTCACTGG										
Mus musculus	RefSeq	ILMN_197046	ILMN_197046	LOC226758	XM_129620.2	XM_129620.2			38073643	XM_129620.2	LOC226758		ILMN_2526711	006760170	S	1833	AGAGGCGGCTGGAAGCAGAGTCAAGACATGCAATTTAGCCCGGTCTCTGC										
Mus musculus	RefSeq	ILMN_210487	ILMN_210487	DUSP9	NM_029352.3	NM_029352.3		75590	32567764	NM_029352.3	Dusp9	NP_083628.3	ILMN_2606120	004920612	S	2635	AATCCACATCATAATCACATTCTTTCATTGTTACTCCTGAATAAACAGTT	X	+	70887519-70887568	XqA7.3	Mus musculus dual specificity phosphatase 9 (Dusp9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IDA]	Pyst3; Dusp4; Mpk4	Pyst3; Dusp4; Mpk4
Mus musculus	RefSeq	ILMN_226031	ILMN_226031	FRMPD4	NM_001033330.2	NM_001033330.2		333605	118131064	NM_001033330.2	Frmpd4	NP_001028502.1	ILMN_2928546	003290463	S	8141	GTGTGGAGGATGTTTGTTTTCGATGCATACTGTATCCTGATTGTGTGCAG	X	-	163909659-163909708	XqF5	Mus musculus FERM and PDZ domain containing 4 (Frmpd4), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Gm196; Pdzk10; Pdzd10	Gm196; Pdzk10; Pdzd10
Mus musculus	RefSeq	ILMN_219823	ILMN_219823	PARP16	NM_177460.3	NM_177460.3		214424	34328418	NM_177460.3	Parp16	NP_803411.2	ILMN_1216174	003840537	S	1981	CTATGAGCCAAATAGAGGGGGAGATGTGTGAACCTGGAGCACCGAGTGGC	9	+	65084496-65084545	9qC	Mus musculus poly (ADP-ribose) polymerase family, member 16 (Parp16), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]	BC055447; MGC65335; C79952	BC055447; MGC65335; C79952
Mus musculus	RefSeq	ILMN_214596	ILMN_214596	ECSIT	NM_012029.1	NM_012029.1		26940	6755521	NM_012029.1	Ecsit	NP_036159.1	ILMN_2824167	003610414	S	1590	GCAGCAGGGGCAAAGTTGAGTCAGATAGAGCTGGCATGAGGAGAAAAGAC				9qA3	Mus musculus ECSIT homolog (Drosophila) (Ecsit), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IPI]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]	Sitpec	Sitpec
Mus musculus	Riken	ILMN_204247	ILMN_204247	A830086J23RIK	ri|A830086J23|PX00156G04|AK044069|1194					AK044069	A830086J23Rik		ILMN_1250888	004730025	S	994	TCTCCAACCTCAGGGCTTAAGGTGCTTTTTCTTGCTCTCTTCCTGGGCGG										
Mus musculus	RefSeq	ILMN_208802	ILMN_208802	JMJD2D	NM_173433.2	NM_173433.2		244694	116174755	NM_173433.2	Jmjd2d	NP_775609.2	ILMN_2589677	003180600	S	2092	CCCCAGTCCAGAGCTTCAGCCCCAGGCTGTGAGTGGAGACTTAATAGTCG	9	-	14267545-14267594	9qA1	Mus musculus jumonji domain containing 2D (Jmjd2d), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	4932416A15	4932416A15
Mus musculus	RefSeq	ILMN_187635	ILMN_237870	REFBP2	NM_019484.4	NM_019484.4		56009	148238334	NM_019484.4	Refbp2	NP_062357.3	ILMN_2697266	007150189	S	1196	GAACACATGACTGACTAGCATGCATGAAGAAGTGGGTTTCATTCTCAGCT				1qH3	Mus musculus RNA and export factor binding protein 2 (Refbp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC117570; REF2; C130042O11Rik	MGC117570; REF2; C130042O11Rik
Mus musculus	Riken	ILMN_203273	ILMN_203273	MURR2	ri|9430001A10|PX00108C23|AK034526|2061					AK034526	Murr2		ILMN_1250020	001850386	S	1370	CAGTTAGTATGGTCTTGAGAGAACAAGGTGAAAGGCACAGAAATGGAGGC										
Mus musculus	Riken	ILMN_205849	ILMN_205849	RELN	ri|A730023J04|PX00150K21|AK042773|1648					AK042773	Reln		ILMN_1259033	003180349	S	1434	CTTCCCTTTCAGAACTGGCAGTGTCACCTTTACCCCTGAGCCGACTTGCC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IGI]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the spinal cord [goid 21511] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IMP]; The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration [goid 21800] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IMP]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of small GTPase mediated signal transduction [goid 51057] [evidence IDA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine/tyrosine = ADP + protein serine/threonine/tyrosine phosphate [goid 4712] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_190269	ILMN_257245	MARK1	NM_145515.1	NM_145515.1		226778	21704013	NM_145515.1	Mark1	NP_663490.1	ILMN_1236611	007610196	S	3062	GCGCCTCGAGGAAGAGTTGAGTCTTTACCAAGCTTACTTGGCCCTCTGGT	1	-	186721686-186721735	1qH5	Mus musculus MAP/microtubule affinity-regulating kinase 1 (Mark1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	Emk3; KIAA1477; mKIAA1477; B930025N23Rik; AW491150	Emk3; KIAA1477; mKIAA1477; B930025N23Rik; AW491150
Mus musculus	RefSeq	ILMN_212559	ILMN_250608	DLG5	XM_981375.2	XM_981375.2		71228	149265238	XM_981375.2	Dlg5	XP_986469.2	ILMN_1253986	005560441	S	7631	GCGAGGAGGCAGGTATGGATCTGACAGGTGGGACATGCTGGACTAAAATG				14qA3	PREDICTED: Mus musculus discs, large homolog 5 (Drosophila) (Dlg5), mRNA.	An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence ISO]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence ISO]		
Mus musculus	MEEBO	ILMN_194789	ILMN_194789	4930430O22RIK	scl10211.1.1_160						4930430O22Rik		ILMN_2509612	002450376	S	16	AATTCACATCCCACGAAGGAGTGGGCACGGGACCCAGACCACCTGAAACA										
Mus musculus	RefSeq	ILMN_213330	ILMN_213330	OLFR1176	NM_146771.1	NM_146771.1		258767	22129308	NM_146771.1	Olfr1176	NP_666982.1	ILMN_2636022	004830372	S	782	GCGTGCTCAAGTCAAAGAGCTCACTGCTTCTTGTTAAGATAGTCACTGTG	2	+	88180505-88180554	2qD	Mus musculus olfactory receptor 1176 (Olfr1176), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC157563; MOR174-5	MGC157563; MOR174-5
Mus musculus	RefSeq	ILMN_220138	ILMN_220138	LRRC66	NM_153568.1	NM_153568.1		231296	23956357	NM_153568.1	Lrrc66	NP_705796.1	ILMN_2780647	001440397	S	2919	GACCCAGTCTCCCACCCAGATTCCAGGATCACACCCTCAACCACAGTTGC	5	-	73998005-73998054	5qC3.3	Mus musculus leucine rich repeat containing 66 (Lrrc66), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC38937	MGC38937
Mus musculus	RefSeq	ILMN_223986	ILMN_312637	LOC667597	XM_001471581.1	XM_001471581.1		667597	149269599	XM_001471581.1	LOC667597	XP_001471631.1	ILMN_1250443	004670039	S	1954	CGTGGAGAACCCTGGATTCCTTCTTTCTATCATTATCTATCTTGATTATG	18	+	60603413-60603462	18qD3	PREDICTED: Mus musculus hypothetical LOC667597 (LOC667597), mRNA.					
Mus musculus	RefSeq	ILMN_196836	ILMN_196836	LOC214111	XM_150205.1	XM_150205.1			20890497	XM_150205.1	LOC214111		ILMN_2525973	002230348	S	121	AGGTCTGAAGGTTTGGGGATACCCCCAGGCTGGGCTTCATGGAGAAACCT										
Mus musculus	MEEBO	ILMN_194846	ILMN_194846	5830411O09RIK	scl078066.1_1						5830411O09Rik		ILMN_2510152	003440520	S	18	GGAAAATAAACCAGAAAATGCCAAAAGTACTGTTTTAGCAGTGCACGTTC										
Mus musculus	RefSeq	ILMN_216454	ILMN_216454	FAM116B	NM_027081.3	NM_027081.3		69440	94400913	NM_027081.3	Fam116b	NP_081357.2	ILMN_2671266	002810326	S	1737	TCCCCGTGAAGGAGGTGACACTGCAGCGGGCTCAGCTGTACATTGATACA	15	-	89015468-89015517	15qE3	Mus musculus family with sequence similarity 116, member B (Fam116b), mRNA.				AI414881	AI414881
Mus musculus	Riken	ILMN_204203	ILMN_204203	9530071H01RIK	ri|9530071H01|PX00113D12|AK035585|1520					AK035585	9530071H01Rik		ILMN_1251285	000460626	S	1241	GAAGGCCAGGTGTGGTGGTGCATATACGTGCCTGTTCTCCTAGCATCTGG										
Mus musculus	RefSeq	ILMN_222270	ILMN_310218	LOC100048579	XM_001480247.1	XM_001480247.1		100048579	149249630	XM_001480247.1	LOC100048579	XP_001480297.1	ILMN_1229328	003180181	S	79	ACTTAGATAAATATCAGATAGTGTTATCATGTGTTTAAATGTTATTTATT					PREDICTED: Mus musculus similar to DNA directed RNA polymerase II polypeptide A (LOC100048579), mRNA.					
Mus musculus	RefSeq	ILMN_222270	ILMN_310218	LOC100048579	XM_001480247.1	XM_001480247.1		100048579	149249630	XM_001480247.1	LOC100048579	XP_001480297.1	ILMN_2747167	004210377	S	194	CAATGAAATTTTTAGGGAGGTATAGTTAAACTGGAAAATTTTAATCAAGT					PREDICTED: Mus musculus similar to DNA directed RNA polymerase II polypeptide A (LOC100048579), mRNA.					
Mus musculus	MEEBO	ILMN_217588	ILMN_217588	OLFR1110	scl4316.1.1_185				22129312	NM_146769	Olfr1110		ILMN_2773949	005670608	S	744	GACATTATTTTATGGGTCTTTGACTTTTAATTATATCCAACCAAGCTCGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_217259	ILMN_256047	PCYT1B	NM_177546.2	NM_177546.2		236899	46877072	NM_177546.2	Pcyt1b	NP_808214.1	ILMN_1232402	002600669	S	4723	GCATTTGCTCTGGTGCTGAATAGTGCAAACTACTGGAACCACCCCAACCC	X	+	90995146-90995195	XqC3	Mus musculus phosphate cytidylyltransferase 1, choline, beta isoform (Pcyt1b), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: CTP + choline phosphate = diphosphate + CDP-choline [goid 4105] [evidence IEA]	CTTbeta; AW045697	CTTbeta; AW045697
Mus musculus	RefSeq	ILMN_256047	ILMN_256047	PCYT1B	NM_177546.2	NM_177546.2		236899	46877072	NM_177546.2	Pcyt1b	NP_808214.1	ILMN_3132186	000070661	A	4606	CTGTTGTGTCGCTGCAGTGTGTCTGGGGACAAAGCCATAAGAAGCCTATC	X	+	90995029-90995078	XqC3	Mus musculus phosphate cytidylyltransferase 1, choline, beta isoform (Pcyt1b), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: CTP + choline phosphate = diphosphate + CDP-choline [goid 4105] [evidence IEA]	CTTbeta; AW045697	CTTbeta; AW045697
Mus musculus	RefSeq	ILMN_189816	ILMN_229844	D730040F13RIK	NM_175518.4	NM_175518.4		242474	126723477	NM_175518.4	D730040F13Rik	NP_780727.3	ILMN_2464610	003420142	S	7809	GCGAATTCCATGGATTGTTAGACTCTCCTGTATGGTAAGCCTCCACCTGC	4	-	56887921-56887970	4qB3	Mus musculus RIKEN cDNA D730040F13 gene (D730040F13Rik), mRNA.				A630051L19Rik	A630051L19Rik
Mus musculus	RefSeq	ILMN_186570	ILMN_310415	VMN2R47	XM_001479343.1	XM_001479343.1		100042891	149256309	XM_001479343.1	Vmn2r47	XP_001479393.1	ILMN_2517089	007560446	S	2109	ATGCTGTTGCCGAGCATTGATTTCAATTCATAATGTTCATAAAGATTTAA	7	-	10403109-10403158	7qA1	PREDICTED: Mus musculus vomeronasal receptor Vmn2r47, transcript variant 3 (Vmn2r47), mRNA.					
Mus musculus	RefSeq	ILMN_223774	ILMN_223774	FAM107A	NM_183187.3	NM_183187.3		268709	118130726	NM_183187.3	Fam107a	NP_899010.1	ILMN_2768972	001510494	S	2672	GAGGAGTAGGACAGGACGTCTGGGATAGAGTAGGACCACCCAAGGGACTT	14	-	9129214-9129263	14qA1	Mus musculus family with sequence similarity 107, member A (Fam107a), mRNA.				MGC58343	MGC58343
Mus musculus	RefSeq	ILMN_195887	ILMN_195887	UBE2R2	NM_026275.4	NM_026275.4		67615	146149099	NM_026275.4	Ube2r2	NP_080551.1	ILMN_1231854	006100291	S	3000	CCACACTACGTTTGTAATCACTTCTCCCTCCTGGCCTGGCCACCATTTGC				4qA5	Mus musculus ubiquitin-conjugating enzyme E2R 2 (Ube2r2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	Cdc34b; 1200003M11Rik; Ubc3b	Cdc34b; 1200003M11Rik; Ubc3b
Mus musculus	RefSeq	ILMN_219091	ILMN_219091	TMEM162	NM_175240.3	NM_175240.3		76415	141802962	NM_175240.3	Tmem162	NP_780449.1	ILMN_1233860	003710184	S	942	GGCAGCCCAGAATCCAGCCAGACAAGGCAGACTCCGTTCTTAGGAGATTG	7	+	31774202-31774251	7qB1	Mus musculus transmembrane protein 162 (Tmem162), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1700020B09Rik; MGC159263	1700020B09Rik; MGC159263
Mus musculus	Riken	ILMN_203398	ILMN_203398	5330438F10RIK	ri|5330438F10|PX00054D20|AK030609|2233					AK030609	5330438F10Rik		ILMN_1256207	002900706	S	1328	CTTTCCCTGGGGACAGCAGGAACGTATATGACTGCTGCTCCTATGCAAGG										
Mus musculus	RefSeq	ILMN_220396	ILMN_220396	NAGLU	NM_013792.1	NM_013792.1		27419	7305298	NM_013792.1	Naglu	NP_038820.1	ILMN_2721503	003610768	S	2314	CAGGGTATGACAGTGAGTGACAATGATGGCTTGGAGGGAAACAAGGTGCT	11	+	100938853-100938902	11qD	Mus musculus alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) (Naglu), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-alpha-D-glucosaminides [goid 4561] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222123	ILMN_222123	SUHW2	NM_177475.2	NM_177475.2		64453	31343456	NM_177475.2	Suhw2	NP_803426.1	ILMN_2804702	000110349	S	4257	CCCCGACTTACCCCGCCTCTGCAGTCTAGCTACATTTCCTAGTCACAGAC	10	+	75500146-75500195	10qC1	Mus musculus suppressor of hairy wing homolog 2 (Drosophila) (Suhw2), mRNA.				D10Jhu82e	D10Jhu82e
Mus musculus	RefSeq	ILMN_196632	ILMN_196632	CYBRD1	XM_130253.3	XM_130253.3			38074854	XM_130253.3	Cybrd1		ILMN_2525111	003890148	S	817	GGAGGCAATGCAGAATGCAGAATGGAAGGCGCCATAGCAATAAGCTCCGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the plasma membrane surrounding the brush border [goid 31526] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus [goid 10039] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 Fe2+ + NAD+ = 2 Fe3+ + NADH + H+ [goid 293] [evidence ISS]		
Mus musculus	RefSeq	ILMN_229184	ILMN_229184	MDGA1	NM_001081160.1	NM_001081160.1		74762	124487208	NM_001081160.1	Mdga1	NP_001074629.1	ILMN_3155228	001940414	A	3035	GAGGCTCGGGCTACCTGGGGGATATTGCCATAGATGATGTCACACTGAAG	17	-	29969897-29969946	17qA3.3	Mus musculus MAM domain containing glycosylphosphatidylinositol anchor 1 (Mdga1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	GPIM; 1200011I03Rik	GPIM; 1200011I03Rik
Mus musculus	RefSeq	ILMN_187998	ILMN_187998	VASP	NM_009499.1	NM_009499.1		22323	33469092	NM_009499.1	Vasp	NP_033525.1	ILMN_1229273	001260577	S	753	CAGTCGAAGCACTGGTGGGGGGCTTATGGAAGAGATGAACGCCATGCTGG	7	-	19845936-19845985	7qA3	Mus musculus vasodilator-stimulated phosphoprotein (Vasp), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IGI]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AA107290	AA107290
Mus musculus	RefSeq	ILMN_199495	ILMN_199495	LOC383573	XM_357130.1	XM_357130.1			38073508	XM_357130.1	LOC383573		ILMN_2535426	006900092	S	99	AACCCGGGAGGCTGTAGATACTGTCATGGCCCTGGAGAACAACCTGAACC										
Mus musculus	RefSeq	ILMN_237015	ILMN_237015	LOC192758	NM_001045516.1	NM_001045516.1		192758	113865884	NM_001045516.1	LOC192758	NP_001038981.1	ILMN_2778555	005490768	S	561	GCAACGTCATCAAGGATATAAAGAGAAAGGAGAAAGAGCAAGATGAGGAG					Mus musculus similar to hypothetical protein MGC39650 (LOC192758), mRNA.					
Mus musculus	RefSeq	ILMN_199255	ILMN_199255	LOC331177	XM_284597.2	XM_284597.2			38093505	XM_284597.2	LOC331177		ILMN_1221118	003450379	S	1000	AAAAGCCCCTGAAGTGGCCAGGCATGGTGAGGCTCTCCTTTAATCCCAGC										
Mus musculus	RefSeq	ILMN_220892	ILMN_220892	B4GALNT1	NM_008080.4	NM_008080.4		14421	118130998	NM_008080.4	B4galnt1	NP_032106.1	ILMN_2728270	000270711	S	1878	CAGTGCATGACCGCCGAGTGACGTCTGATTTGGGCCTTCACACTGTCAGG	10	+	126608869-126608889:126608890-126608918	10qD3	Mus musculus beta-1,4-N-acetyl-galactosaminyl transferase 1 (B4galnt1), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	Covalent attachment of a glycosyl residue to a lipid molecule [goid 30259] [evidence IEA]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IGI]; The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1574] [evidence IMP]; The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1574] [evidence IGI]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + (N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide = UDP + N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide [goid 3947] [evidence IEA]	Gal-NAc-T; Ggm2; Ggm-2; 4933429D13Rik; GalNAcT; Galgt1; GalNAc-T	Gal-NAc-T; Ggm2; Ggm-2; 4933429D13Rik; GalNAcT; Galgt1; GalNAc-T
Mus musculus	RefSeq	ILMN_222423	ILMN_222423	CSF2	NM_009969.4	NM_009969.4		12981	145301581	NM_009969.4	Csf2	NP_034099.2	ILMN_2749412	006370176	S	849	GCCCTCTGAAAACGCTGACTCAGCTTGGACAGCGGAAGACAAACGAGAGA				11qB1.3	Mus musculus colony stimulating factor 2 (granulocyte-macrophage) (Csf2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence IDA]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IGI]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Interacting selectively with the granulocyte macrophage colony-stimulating factor receptor [goid 5129] [evidence IEA]	MGC151257; Gm-CSf; MGI-IGM; Csfgm; MGC151255	MGC151257; Gm-CSf; MGI-IGM; Csfgm; MGC151255
Mus musculus	RefSeq	ILMN_210011	ILMN_210011	TBX20	NM_194263.1	NM_194263.1		57246	34878725	NM_194263.1	Tbx20	NP_919239.1	ILMN_1260194	000830392	S	3957	CCCATAGAGCAAGGGTAAGGGCTTGATATTTAATAATTGGCCTCTTGCAA	9	-	24527684-24527733	9qA4	Mus musculus T-box 20 (Tbx20), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence IMP]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IGI]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	AL022859; 9430010M06Rik; Tbx12	AL022859; 9430010M06Rik; Tbx12
Mus musculus	RefSeq	ILMN_210011	ILMN_210011	TBX20	NM_194263.1	NM_194263.1		57246	34878725	NM_194263.1	Tbx20	NP_919239.1	ILMN_2601336	002370358	S	3672	CCAAGGCCAAGTCCAGTCTATGAAACAAGGTACCATACCCAGTCTGAGCA	9	-	24527969-24528018	9qA4	Mus musculus T-box 20 (Tbx20), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence IMP]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IMP]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IGI]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	AL022859; 9430010M06Rik; Tbx12	AL022859; 9430010M06Rik; Tbx12
Mus musculus	RefSeq	ILMN_210843	ILMN_210843	CYFIP1	NM_011370.1	NM_011370.1		20430	7242204	NM_011370.1	Cyfip1	NP_035500.1	ILMN_2861469	001170129	S	3200	CACTGCACCTTGTCCCACTGATTGAAAGGCTGGGCACCCCACAGCAAATT	7	+	63180562-63180576:63181658-63181692	7qB5	Mus musculus cytoplasmic FMR1 interacting protein 1 (Cyfip1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin [goid 5522] [evidence TAS]	mKIAA0068; E030028J09Rik; KIAA0068; Sra-1; Shyc; P140SRA-1	mKIAA0068; E030028J09Rik; KIAA0068; Sra-1; Shyc; P140SRA-1
Mus musculus	Riken	ILMN_204553	ILMN_204553	B930008M10RIK	ri|B930008M10|PX00162G08|AK046977|1870					AK046977	B930008M10Rik		ILMN_1235194	003780397	S	1492	GGCCTTAGGCATCTCCAGTAAAAGGGTTATTCAACCCCCCAAAAGGTCAC										
Mus musculus	Riken	ILMN_205251	ILMN_205251	E230016F22RIK	ri|E230016F22|PX00210G05|AK087585|3221					AK087585	E230016F22Rik		ILMN_2571134	007040398	S	2640	GCTGGGCCTCCATCCTGAATGGCAAGAAGAAAGGCAGCTGGACACGAGCA										
Mus musculus	MEEBO	ILMN_216363	ILMN_216363	TFB2M	scl015278.1_322	XM_122407.1			20849429	XM_122407.1	Tfb2m		ILMN_2687148	004290328	S	544	GGATCCTAGATATCAGGAAGTAGTAAGACCAGATGTGAGTTCACAGGCAA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor [goid 179] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule [goid 8649] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216363	ILMN_216363	TFB2M	scl015278.1_322	XM_122407.1			20849429	XM_122407.1	Tfb2m		ILMN_1215264	004050576	S	542	ATGGATCCTAGATATCAGGAAGTAGTAAGACCAGATGTGAGTTCACAGGC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor [goid 179] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule [goid 8649] [evidence IEA]		
Mus musculus	RefSeq	ILMN_260134	ILMN_260134	D730039F16RIK	NM_030021.1	NM_030021.1		77996	58037514	NM_030021.1	D730039F16Rik	NP_084297.1	ILMN_2912410	002470367	S	2085	GCTCATGAAGTCCCCTCTACCTTTGAAAAGCCTCTCTCCTGGGTCGGAGG	2	+	34713915-34713964	2qB	Mus musculus RIKEN cDNA D730039F16 gene (D730039F16Rik), mRNA.					
Mus musculus	RefSeq	ILMN_244031	ILMN_244031	CYB5	NM_025797.1	NM_025797.1		109672	13385267	NM_025797.1	Cyb5	NP_080073.1	ILMN_2966632	002810072	S	481	CCGAAGCCGAAGAACTAAAAGACTGCCCCAGAGCGGGGAGAAAAGAAGCC	18	+	85013788-85013837	18qE4	Mus musculus cytochrome b-5 (Cyb5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IC ]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence TAS]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	0610009N12Rik	0610009N12Rik
Mus musculus	RefSeq	ILMN_216590	ILMN_323729	LOC100048049	XM_001479722.1	XM_001479722.1		100048049	149270739	XM_001479722.1	LOC100048049	XP_001479772.1	ILMN_2708610	007320129	S	646	GCGATTGAGACGCTGCAAAAGTCTGACGGTCTGTCCACTCACAGAAGCTC					PREDICTED: Mus musculus similar to Regulatory factor X, 3 (influences HLA class II expression), transcript variant 2 (LOC100048049), mRNA.					
Mus musculus	MEEBO	ILMN_192802	ILMN_192802	TENS1	scl00319939.1_268				51766289	XM_109868	Tens1		ILMN_1241258	006510494	S	4	CTGGAGGGCTGGTTGTCCTTGATGTGTGGTCTGCATAGCATGGGAAACAC										
Mus musculus	MEEBO	ILMN_192802	ILMN_192802	TENS1	scl00319939.1_268				51766289	XM_109868	Tens1		ILMN_2491469	006200328	S	6	GGAGGGCTGGTTGTCCTTGATGTGTGGTCTGCATAGCATGGGAAACACTG										
Mus musculus	RefSeq	ILMN_185763	ILMN_185763	TNFAIP1	NM_009395.3	NM_009395.3		21927	142374284	NM_009395.3	Tnfaip1	NP_033421.2	ILMN_2429800	003940520	S	3482	CTGGCAGGAAAGAATGTGCCCTTTACTACATACCTGCGGTCTCAGTTGCT	11	-	78337651-78337700	11qB5	Mus musculus tumor necrosis factor, alpha-induced protein 1 (endothelial) (Tnfaip1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 1370465] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Tnfip1; Edp1; Edp-1	Tnfip1; Edp1; Edp-1
Mus musculus	RefSeq	ILMN_221750	ILMN_221750	A930018P22RIK	NM_026634.2	NM_026634.2		68243	142386934	NM_026634.2	A930018P22Rik	NP_080910.1	ILMN_2739829	001450093	S	685	CCTCCTTAGGTGTTAGTGCTTAGATAATGTGTCCTAGTTGTTGTCATTTC	2	+	103964769-103964818	2qE2	Mus musculus RIKEN cDNA A930018P22 gene (A930018P22Rik), mRNA.				RP24-297H17.2	RP24-297H17.2
Mus musculus	RefSeq	ILMN_220864	ILMN_220864	OLFR1277	NM_146396.1	NM_146396.1		258391	33238967	NM_146396.1	Olfr1277	NP_666508.1	ILMN_2727902	000020546	S	716	CTTGTACTGCCCACATCACAGTGGTGGTATTATTTTTTGGGCCCTGCATC	2	-	111109757-111109806	2qE3	Mus musculus olfactory receptor 1277 (Olfr1277), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR248-11	MOR248-11
Mus musculus	MEEBO	ILMN_223663	ILMN_223663	4930588N13RIK	scl26947.9.1_82	XM_132524.3			38081644	XM_132524.3	4930588N13Rik		ILMN_2767364	000940605	S	619	CAAGAAAAAAATGAGTGAAATTTCTCCAAATATATTGTGCTAGTATGGAC										
Mus musculus	RefSeq	ILMN_196415	ILMN_196415	1700026N04RIK	XM_147733.1	XM_147733.1			20894802	XM_147733.1	1700026N04Rik		ILMN_1219171	002630475	S	295	AGAAGGACGCAAGCAGAGGAGGAATGAAGCTGGTCCCACAGTCCGTCAGC										
Mus musculus	MEEBO	ILMN_193851	ILMN_193851	SEC22L3	scl0331041.1_252				31341027	NM_178677	Sec22l3		ILMN_2501016	007560358	S	7	GCACATTCTAACTTTCACATGCTCAAACTGAAATGTATGTCAACGTGCGG										
Mus musculus	RefSeq	ILMN_187124	ILMN_238838	LOXHD1	XM_916184.3	XM_916184.3		240411	149270122	XM_916184.3	Loxhd1	XP_921277.3	ILMN_1221733	005290576	S	2440	GGCAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCG				18qE3	PREDICTED: Mus musculus lipoxygenase homology domains 1 (Loxhd1), mRNA.					
Mus musculus	RefSeq	ILMN_198266	ILMN_238838	LOXHD1	XM_916184.3	XM_916184.3		240411	149270122	XM_916184.3	Loxhd1	XP_921277.3	ILMN_1219125	003840100	S	6495	CGTGACGACAGGCTACGAACCAGGAGCGGGTACTGATGCCAACGTCTTTG				18qE3	PREDICTED: Mus musculus lipoxygenase homology domains 1 (Loxhd1), mRNA.					
Mus musculus	RefSeq	ILMN_219179	ILMN_219179	THOC1	NM_153552.2	NM_153552.2		225160	31543863	NM_153552.2	Thoc1	NP_705780.1	ILMN_2850527	002600161	S	1498	GAGCTCTTAGACTCTTAGCCCGGAGAAGCCCTCACTTCTTTCAGCCAACC	18	+	9992156-9992205	18qA1	Mus musculus THO complex 1 (Thoc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence RCA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence RCA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC28284; 3110002N20Rik; AW107452; NMP-84	MGC28284; 3110002N20Rik; AW107452; NMP-84
Mus musculus	RefSeq	ILMN_202894	ILMN_222343	PLA2G3	NM_172791.2	NM_172791.2		237625	145207954	NM_172791.2	Pla2g3	NP_766379.2	ILMN_1215042	003830593	S	2492	GCTACCAACTAAATCACACCCCCAGCTTGAAAAGGGGACCCGTAACCGTG				11qA1	Mus musculus phospholipase A2, group III (Pla2g3), mRNA.				9130003P18Rik	9130003P18Rik
Mus musculus	MEEBO	ILMN_220273	ILMN_220273	2410017I17RIK	scl069717.4_83				51770253	XM_488815	2410017I17Rik		ILMN_2720011	001580273	S	738	AGCGGGTCTGGAAGGGAGCAGGGCGCCGGTCTTGCGACGTGGCTGGAGAA										
Mus musculus	RefSeq	ILMN_190246	ILMN_247050	SH2D2A	NM_001025571.1	NM_001025571.1		27371	70909333	NM_001025571.1	Sh2d2a	NP_001020742.1	ILMN_1228404	004760575	S	1445	GCTCACCCTCACAGTTTCCCCACAGAGTTTCAGTCATGTCTGAATGTGGT	3	+	87656611-87656660	3qF1	Mus musculus SH2 domain protein 2A (Sh2d2a), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence ISS]	Ribp; Lad; TSAd	Ribp; Lad; TSAd
Mus musculus	RefSeq	ILMN_199242	ILMN_240825	LOC673352	XM_001005374.1	XM_001005374.1		673352	94421118	XM_001005374.1	LOC673352	XP_001005374.1	ILMN_1240485	004850673	S	425	GTCTTTTCACACTCACACTAGATCACATCATAGGTACCTTCACTTTGGGG					PREDICTED: Mus musculus similar to PRAME family member 9 (LOC673352), mRNA.					
Mus musculus	RefSeq	ILMN_247011	ILMN_247011	L3MBTL	NM_001081338.1	NM_001081338.1		241764	124486778	NM_001081338.1	L3mbtl	NP_001074807.1	ILMN_3090844	002070431	A	2625	GCTGACACAGGCGGACATTGTGAAGATCATGAGTGTCAAGCTAGGCCCAG	2	+	162800150-162800199	2qH2	Mus musculus l(3)mbt-like (Drosophila) (L3mbtl), mRNA.				L3MBTL1; mKIAA0681; C630004G01; KIAA0681	L3MBTL1; mKIAA0681; C630004G01; KIAA0681
Mus musculus	Riken	ILMN_203118	ILMN_203118	4632413C10RIK	ri|4632413C10|PX00012B13|AK028513|3196					AK028513	4632413C10Rik		ILMN_1258698	001300739	S	3066	CTGCACCTCACTCATTGGCTGCTGAACACAGAGATGACTGGCTGACCTGA										
Mus musculus	RefSeq	ILMN_212699	ILMN_212699	MCF2L	NM_178076.2	NM_178076.2		17207	46849759	NM_178076.2	Mcf2l	NP_835177.1	ILMN_2629329	004490010	S	3223	GATGCTGAGGAAGACGGTGGAGTGGGCCCTAAGAAGCTGGTGCCGGGTAA	8	+	13017430-13017468:13018061-13018071	8qA1.1	Mus musculus mcf.2 transforming sequence-like (Mcf2l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	mKIAA0362; Ost; C130040G20Rik; Ost gamma; Dbs	mKIAA0362; Ost; C130040G20Rik; Ost gamma; Dbs
Mus musculus	RefSeq	ILMN_212699	ILMN_212699	MCF2L	NM_178076.2	NM_178076.2		17207	46849759	NM_178076.2	Mcf2l	NP_835177.1	ILMN_2847276	004860626	S	5080	GTATGTCCAGGAAAAACACCCTCCTCCCCTGCCCTATGGCTTGCAAAGCC	8	+	13020401-13020450	8qA1.1	Mus musculus mcf.2 transforming sequence-like (Mcf2l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	mKIAA0362; Ost; C130040G20Rik; Ost gamma; Dbs	mKIAA0362; Ost; C130040G20Rik; Ost gamma; Dbs
Mus musculus	RefSeq	ILMN_212699	ILMN_212699	MCF2L	NM_178076.2	NM_178076.2		17207	46849759	NM_178076.2	Mcf2l	NP_835177.1	ILMN_2689784	004810546	S	4983	TTTATGGTCTCACGCTGCTGAACATGTGTCACTTTACGGTCCCTCCCTGT	8	+	13020304-13020353	8qA1.1	Mus musculus mcf.2 transforming sequence-like (Mcf2l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	mKIAA0362; Ost; C130040G20Rik; Ost gamma; Dbs	mKIAA0362; Ost; C130040G20Rik; Ost gamma; Dbs
Mus musculus	RefSeq	ILMN_215522	ILMN_215522	MMP23	NM_011985.2	NM_011985.2		26561	118129979	NM_011985.2	Mmp23	NP_036115.1	ILMN_1237364	004180050	S	1268	CACAGCTGAGCATCATTGCCAACGCAGTCAACGAAGGCACCTACACATGT	4	-	155024880-155024929	4qE2	Mus musculus matrix metallopeptidase 23 (Mmp23), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	CA-MMP; MGC130335; MGC130334	CA-MMP; MGC130335; MGC130334
Mus musculus	Riken	ILMN_205986	ILMN_205986	D230032O14RIK	ri|D230032O14|PX00189N17|AK051996|1488					AK051996	D230032O14Rik		ILMN_1249080	000620750	S	1051	CCCCATTACATCGTACCTTGCTTACTCCTCTGTTGGCACAGCTCACAGTA										
Mus musculus	RefSeq	ILMN_187211	ILMN_257393	EG666609	XM_984926.2	XM_984926.2		666609	149268621	XM_984926.2	EG666609	XP_990020.1	ILMN_2742647	006480767	S	114	GAACCTTGTGATTGACGAGTGTGTGGAGATGGCAACCAGTGGGCAACAGA	17	-	26236003-26236052	17qA3.3	PREDICTED: Mus musculus predicted gene, EG666609 (EG666609), mRNA.					
Mus musculus	Riken	ILMN_202131	ILMN_202131	CAPN10	ri|2900008C09|ZX00068K05|AK013497|1269					AK013497	Capn10		ILMN_1251808	007050722	S	1192	GAGTTTTTCCCTGAATGTGTGCAGCCTTTTCTGATTTTGTTGTATACCAC						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the directed movement of substances within cells [goid 32388] [evidence IMP]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46326] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211230	ILMN_211230	H2-T24	NM_008207.2	NM_008207.2		15042	24475904	NM_008207.2	H2-T24	NP_032233.1	ILMN_1229173	002710639	S	1409	CCCGCTTGCTGCTCTTAGCTGAGGAGAGGCACAACTAAGCACTGGCATTG	17	-	35614421-35614470	17qB1	Mus musculus histocompatibility 2, T region locus 24 (H2-T24), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	H-2T24	H-2T24
Mus musculus	RefSeq	ILMN_202195	ILMN_320765	LOC100047193	XR_033770.1	XR_033770.1		100047193	149260441	XR_033770.1	LOC100047193		ILMN_1232013	000620706	S	2451	TGGTAGCATCAGAAGAGCATGGTGGAGAGCTGCTTGTATCATCAACGCGC					PREDICTED: Mus musculus similar to kinesin family member 9 (LOC100047193), misc RNA.					
Mus musculus	RefSeq	ILMN_208892	ILMN_208892	PRMT7	NM_145404.1	NM_145404.1		214572	21703807	NM_145404.1	Prmt7	NP_663379.1	ILMN_2780915	000510575	S	1778	AAGCACTCCCTGGATTTCCGAGAGAGCAGAGAGGCAGAGCCACACCCACT	8	+	108772321-108772323:108774208-108774254	8qD3	Mus musculus protein arginine N-methyltransferase 7 (Prmt7), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	4933402B05Rik; BC006705; MGC7929	4933402B05Rik; BC006705; MGC7929
Mus musculus	RefSeq	ILMN_208892	ILMN_208892	PRMT7	NM_145404.1	NM_145404.1		214572	21703807	NM_145404.1	Prmt7	NP_663379.1	ILMN_2736347	002230307	S	2157	CCCTCACTGGAGACATCACCATGGAGTTTAGGCTTGCAGACACCTTGAGC	8	+	108775497-108775546	8qD3	Mus musculus protein arginine N-methyltransferase 7 (Prmt7), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	4933402B05Rik; BC006705; MGC7929	4933402B05Rik; BC006705; MGC7929
Mus musculus	RefSeq	ILMN_208892	ILMN_208892	PRMT7	NM_145404.1	NM_145404.1		214572	21703807	NM_145404.1	Prmt7	NP_663379.1	ILMN_1252819	006250072	S	935	CCTTTGGCGTCTGGCCAAGCACAGGTGGTTCTGTCCTGGTGGGACATTGA	8	+	108761180-108761229	8qD3	Mus musculus protein arginine N-methyltransferase 7 (Prmt7), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	4933402B05Rik; BC006705; MGC7929	4933402B05Rik; BC006705; MGC7929
Mus musculus	RefSeq	ILMN_208892	ILMN_208892	PRMT7	NM_145404.1	NM_145404.1		214572	21703807	NM_145404.1	Prmt7	NP_663379.1	ILMN_1220228	000050500	S	429	CTGAGGCTGCTGTGAAGATTGTGGAGAGGAATGGCTTCAGTGATAAGATT	8	+	108751127-108751176	8qD3	Mus musculus protein arginine N-methyltransferase 7 (Prmt7), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	4933402B05Rik; BC006705; MGC7929	4933402B05Rik; BC006705; MGC7929
Mus musculus	RefSeq	ILMN_197093	ILMN_197093	LOC380815	XM_358430.1	XM_358430.1			38073975	XM_358430.1	LOC380815		ILMN_1225199	003390035	S	589	AGAAGATGAAAAGAAGCCACAGCTGCCCCCCGCCGGGCTACTTCCGGAAC										
Mus musculus	Riken	ILMN_204646	ILMN_204646	5430417J04RIK	ri|5430417J04|PX00102D01|AK030671|3212					AK030671	5430417J04Rik		ILMN_1226541	001450180	S	2521	AGTTTGCAGCAAGACCGTTTCTTGTGGGTCTTTCAACACCAGCTGGGTCC										
Mus musculus	RefSeq	ILMN_186169	ILMN_225175	KLF7	NM_033563.2	NM_033563.2		93691	31981435	NM_033563.2	Klf7	NP_291041.2	ILMN_1251426	007150066	S	1017	GCCCTGAAAACAAGAAGAGGGTCCATCGCTGTCAGTTTAACGGGTGCCGG	1	-	64125332-64125381	1qC2	Mus musculus Kruppel-like factor 7 (ubiquitous) (Klf7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]	9830124P08Rik	9830124P08Rik
Mus musculus	RefSeq	ILMN_186263	ILMN_234943	NFATC3	NM_010901.2	NM_010901.2		18021	113199768	NM_010901.2	Nfatc3	NP_035031.2	ILMN_2659540	001050647	S	3626	GCGTTCCCTCTCCTTAAGCCACAGGCAGATTGTGTAAAACAGGAACAGCA	8	+	108652049-108652098	8qD3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 (Nfatc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	NFAT4; D8Ertd281e; NFATx; C80703	NFAT4; D8Ertd281e; NFATx; C80703
Mus musculus	RefSeq	ILMN_205975	ILMN_234943	NFATC3	NM_010901.2	NM_010901.2		18021	113199768	NM_010901.2	Nfatc3	NP_035031.2	ILMN_1252860	004390309	S	51	CTTGGTTGAGGCGACCGTGGCTTTTCTGCACCCTCGACCGGCGGCGGTGA	8	+	108583553-108583602	8qD3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 (Nfatc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	NFAT4; D8Ertd281e; NFATx; C80703	NFAT4; D8Ertd281e; NFATx; C80703
Mus musculus	RefSeq	ILMN_186263	ILMN_234943	NFATC3	NM_010901.2	NM_010901.2		18021	113199768	NM_010901.2	Nfatc3	NP_035031.2	ILMN_1247401	000870047	S	5927	GCTCCTATACAAAGGGAAGATGAGCCAGCAGTCCAGGCTCCTCCTCAGTT	8	+	108654350-108654399	8qD3	Mus musculus nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 (Nfatc3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	NFAT4; D8Ertd281e; NFATx; C80703	NFAT4; D8Ertd281e; NFATx; C80703
Mus musculus	RefSeq	ILMN_220260	ILMN_220260	EIF2AK2	NM_011163.3	NM_011163.3		19106	144227203	NM_011163.3	Eif2ak2	NP_035293.1	ILMN_1250410	000830762	S	4221	CTCCTCCACTGTCAACCGAGGCTTCTGCCAAATCTTCCCTGTCATGAAGG	17	-	79251945-79251994	17qE3	Mus musculus eukaryotic translation initiation factor 2-alpha kinase 2 (Eif2ak2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; The process of apoptosis in cells infected with a virus [goid 6926] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IDA]	4732414G15Rik; Prkr; 2310047A08Rik; AI467567; AI747578; Tik; Pkr	4732414G15Rik; Prkr; 2310047A08Rik; AI467567; AI747578; Tik; Pkr
Mus musculus	MEEBO	ILMN_189450	ILMN_189450	TCFCP2L3	scl00252973.2_282				46849779	NM_026496	Tcfcp2l3		ILMN_1226415	004890168	S	20	CGACGGCAGTAGTCAGTCTGATGAGTCTATATTTTTACACAACACTAACA										
Mus musculus	RefSeq	ILMN_246213	ILMN_246213	SP140	NM_001013817.2	NM_001013817.2		434484	126215540	NM_001013817.2	Sp140	NP_001013839.1	ILMN_3162887	000540088	I	933	TGCCCTCATCCCTGAGACAAGAAGCAGGAGCACAGCAACCCACACGTGAA	1	+	87511820-87511846:87516631-87516653	1qC5	Mus musculus Sp140 nuclear body protein (Sp140), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_259928	ILMN_259928	SH3D19	NM_001082414.1	NM_001082414.1		27059	126723607	NM_001082414.1	Sh3d19	NP_001075883.1	ILMN_3142730	001780273	A	4144	GCAAGCCATACAAGAGCAAGAAGGGGGCAGGGGTGTGGAGAGGGGTATGA	3	+	85932174-85932223	3qF1	Mus musculus SH3 domain protein D19 (Sh3d19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Kryn; AW011754	Kryn; AW011754
Mus musculus	RefSeq	ILMN_221338	ILMN_221338	OSBP2	NM_152818.2	NM_152818.2		74309	61744457	NM_152818.2	Osbp2	NP_690031.2	ILMN_1246734	006840167	S	3812	TCCAACCCATTTCACTTCAGTTTGATCTGGAAAGTTCCTTGCAGGGCCTT	11	-	3603969-3604018	11qA1	Mus musculus oxysterol binding protein 2 (Osbp2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700095P05Rik; ORP-4; OSBPL1; Gm244; C630001G20Rik	1700095P05Rik; ORP-4; OSBPL1; Gm244; C630001G20Rik
Mus musculus	RefSeq	ILMN_217254	ILMN_217254	TMEM88	NM_025915.2	NM_025915.2		67020	31560206	NM_025915.2	Tmem88	NP_080191.2	ILMN_2822321	007380519	S	1381	CTAGCCCTCCCCTGACATTGGACCTACACACAGACACAGGCCACTTTGGT	11	-	69212865-69212914	11qB3	Mus musculus transmembrane protein 88 (Tmem88), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			2600017H02Rik; RP23-5O23.4	2600017H02Rik; RP23-5O23.4
Mus musculus	RefSeq	ILMN_191295	ILMN_248967	CDC73	NM_145991.1	NM_145991.1		214498	22122444	NM_145991.1	Cdc73	NP_666103.1	ILMN_1216938	004060017	S	2543	CTTCTATTTGTACACATGTCAACTTGGGACTTCTTATCTTCCATTATCCC	1	-	145454714-145454763	1qF	Mus musculus cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (Cdc73), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		Hrpt2; MGC29274; C81219; MGC36559; 8430414L16Rik; BC027756; C130030P16Rik	Hrpt2; MGC29274; C81219; MGC36559; 8430414L16Rik; BC027756; C130030P16Rik
Mus musculus	MEEBO	ILMN_189682	ILMN_189682	RBBP9	scl18572.5_283				7657499	NM_015754	Rbbp9		ILMN_1222004	005270392	S	223	GTTCCGGGGCCATCGCAGCCATGAGGTATGCAGAGACACATCAGGTATAC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_197129	ILMN_197129	LOC238507	XM_138433.4	XM_138433.4		238507	82949616	XM_138433.4	LOC238507	XP_138433.4	ILMN_1220456	000430091	S	65	CCAGTTGGAACCAGATTCTGACTATCACCGTCAAAGGCCCACCTCAGAGG	13	+	12732544-12732593	13qA1	PREDICTED: Mus musculus similar to Ribonucleoside-diphosphate reductase M2 subunit (Ribonucleotide reductase small subunit) (Ribonucleotide reductase small chain) (LOC238507), mRNA.					
Mus musculus	RefSeq	ILMN_212154	ILMN_212154	OLFR49	NM_010991.1	NM_010991.1		18348	6754931	NM_010991.1	Olfr49	NP_035121.1	ILMN_1237299	003290286	S	779	CTGGCAAGAATGGACAGGGGGAGGATCATAACAAGGTGGTGGCATTGCTC	14	-	54901740-54901789	14qC2	Mus musculus olfactory receptor 49 (Olfr49), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR118-1; IC6	MOR118-1; IC6
Mus musculus	MEEBO	ILMN_217704	ILMN_217704	ARD1	scl0056292.1_41	NM_019870.1			9845235	NM_019870.1	Ard1		ILMN_2744280	001580259	S	187	GAACATGCAGCACTGCAACCTTCTCTGCCTGCCGGAGAACTACCAGATGA										
Mus musculus	RefSeq	ILMN_222662	ILMN_222662	SURF6	NM_009298.3	NM_009298.3		20935	142366474	NM_009298.3	Surf6	NP_033324.1	ILMN_2753108	007160082	S	2121	GTGGAGATAGGGCTACTTTTAACTAGGTGACAGGAATGGCCAGACATAGG	2	-	26746689-26746738	2qA3	Mus musculus surfeit gene 6 (Surf6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure found in the nucleolus, which contains nearly completed preribosomal particles destined for the cytoplasm [goid 1652] [evidence IDA]	The aggregation, arrangement and bonding together of the mature ribosome and of its subunits [goid 42255] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IDA]	Surf-6; D2Wsu129e	Surf-6; D2Wsu129e
Mus musculus	RefSeq	ILMN_198764	ILMN_318297	LOC245600	XR_032090.1	XR_032090.1		245600	149272264	XR_032090.1	LOC245600		ILMN_1231163	005560717	S	2282	CCAAGGCACAGGCTGAAAGTGATGCTCTCCATGCTGACCTCCTGAAAGAG	X	-	128382536-128382585	XqE3	PREDICTED: Mus musculus similar to transforming acidic coiled-coil containing protein 1 long (LOC245600), misc RNA.					
Mus musculus	RefSeq	ILMN_209554	ILMN_209554	PPP2R5D	NM_009358.2	NM_009358.2		21770	33942058	NM_009358.2	Ppp2r5d	NP_033384.2	ILMN_1250063	003180133	S	2617	CATGGCTCCCTGCTGTGCCTGTTTATTTCCTGGTTTCTGCTGACGCTGGG	17	-	46820144-46820193	17qC	Mus musculus protein phosphatase 2, regulatory subunit B (B56), delta isoform (Ppp2r5d), mRNA.				TEG-271; Tex271	TEG-271; Tex271
Mus musculus	RefSeq	ILMN_209554	ILMN_209554	PPP2R5D	NM_009358.2	NM_009358.2		21770	33942058	NM_009358.2	Ppp2r5d	NP_033384.2	ILMN_2596907	004540079	S	317	CGACGCCAAAGCTCCTTCCCCTTCAACCTCAACAAGAACCGGGAGCTACA	17	-	46824805-46824854	17qC	Mus musculus protein phosphatase 2, regulatory subunit B (B56), delta isoform (Ppp2r5d), mRNA.				TEG-271; Tex271	TEG-271; Tex271
Mus musculus	RefSeq	ILMN_209554	ILMN_209554	PPP2R5D	NM_009358.2	NM_009358.2		21770	33942058	NM_009358.2	Ppp2r5d	NP_033384.2	ILMN_2766403	001740176	S	2802	CATGCTAAGGTGGGCTGGGCTTGGGCCGATGTCCCCATATGTACAGAACT	17	-	46819959-46820008	17qC	Mus musculus protein phosphatase 2, regulatory subunit B (B56), delta isoform (Ppp2r5d), mRNA.				TEG-271; Tex271	TEG-271; Tex271
Mus musculus	RefSeq	ILMN_209554	ILMN_209554	PPP2R5D	NM_009358.2	NM_009358.2		21770	33942058	NM_009358.2	Ppp2r5d	NP_033384.2	ILMN_2956881	003390187	S	2450	ATGACTAGTGGGCCCGGTGGGGAGAAAGAACCATCTGCCTTGCCCTCTCT	17	-	46820311-46820360	17qC	Mus musculus protein phosphatase 2, regulatory subunit B (B56), delta isoform (Ppp2r5d), mRNA.				TEG-271; Tex271	TEG-271; Tex271
Mus musculus	RefSeq	ILMN_209554	ILMN_209554	PPP2R5D	NM_009358.2	NM_009358.2		21770	33942058	NM_009358.2	Ppp2r5d	NP_033384.2	ILMN_2608394	001240181	S	1558	AATGAAGGAGAGAGAGGAGATGTGGCAGAAGATCGAGGAGCTGGCCCGGC	17	-	46821465-46821514	17qC	Mus musculus protein phosphatase 2, regulatory subunit B (B56), delta isoform (Ppp2r5d), mRNA.				TEG-271; Tex271	TEG-271; Tex271
Mus musculus	RefSeq	ILMN_222489	ILMN_209554	PPP2R5D	NM_009358.2	NM_009358.2		21770	33942058	NM_009358.2	Ppp2r5d	NP_033384.2	ILMN_2765450	006760048	S	2842	CATATGGGGACATCGGCCCAAGCCCAGCCCACCTTAGCATGTATCACTCT				17qC	Mus musculus protein phosphatase 2, regulatory subunit B (B56), delta isoform (Ppp2r5d), mRNA.				TEG-271; Tex271	TEG-271; Tex271
Mus musculus	MEEBO	ILMN_192554	ILMN_192554	C130040J23RIK	scl44347.1.1_0						C130040J23Rik		ILMN_2489154	002710441	S	5	GGGCGTTTCTCTCTTTGTGCCGGTTTCCTTTCTGCCTGTTACAAGGATTG										
Mus musculus	RefSeq	ILMN_215789	ILMN_215789	OLFR373	NM_146539.1	NM_146539.1		258532	33238887	NM_146539.1	Olfr373	NP_666750.1	ILMN_2663595	000510605	S	715	CCACGTGCTCCTCACATGTGACTGTAGTGGGTCTCTTTTTTGGGGCAGCT				8qB3.3	Mus musculus olfactory receptor 373 (Olfr373), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR282-1; MOR282-2; MGC140917	MOR282-1; MOR282-2; MGC140917
Mus musculus	RefSeq	ILMN_189359	ILMN_257867	PRMT5	NM_013768.2	NM_013768.2		27374	141802506	NM_013768.2	Prmt5	NP_038796.1	ILMN_2720634	001570379	S	213	GGGAGTTCATTCAGGAACCTGCTAAGAATCGGCCTGGCCCCCAGACACGA	14	-	55135359-55135408	14qC3	Mus musculus protein arginine N-methyltransferase 5 (Prmt5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The addition of a methyl group onto a nitrogen atom of an arginine residue in a protein [goid 35246] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence ISO]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [evidence IEA]	Jbp1; Skb1	Jbp1; Skb1
Mus musculus	RefSeq	ILMN_189359	ILMN_257867	PRMT5	NM_013768.2	NM_013768.2		27374	141802506	NM_013768.2	Prmt5	NP_038796.1	ILMN_2722455	006580121	S	1965	GCCTCTAGCCCTGCACACAGTGTCAAAGCCTTGGAAGCAGCTCTGAGTTC	14	-	55126590-55126631:55126632-55126639	14qC3	Mus musculus protein arginine N-methyltransferase 5 (Prmt5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The addition of a methyl group onto a nitrogen atom of an arginine residue in a protein [goid 35246] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence ISO]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [evidence IEA]	Jbp1; Skb1	Jbp1; Skb1
Mus musculus	MEEBO	ILMN_188883	ILMN_188883	4732497O03RIK	scl39857.20.1_310				31541955	NM_144826	4732497O03Rik		ILMN_2456555	000450707	S	10	CATTGACTAGTATGTATCAAATGTCTATCCATCACAGACCAGCACTGCCA										
Mus musculus	MEEBO	ILMN_184556	ILMN_184556	SSBP1	scl00381760.1_243				48374437	NM_028358	Ssbp1		ILMN_2463733	004040056	S	7	GCTGACCTTCTGTAGCAGCCTCACGAAATCAGTGCTCTTCATTGTCAGTG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198066	ILMN_198066	LOC231869	XM_132481.3	XM_132481.3			38081575	XM_132481.3	LOC231869		ILMN_2530372	003120670	S	391	GACGTCATCCTTGCAGTGAGTGACATAGAGGCAGAGGATGGAGCTGACCC										
Mus musculus	RefSeq	ILMN_238927	ILMN_238927	CCDC58	NM_198645.1	NM_198645.1		381045	38348527	NM_198645.1	Ccdc58	NP_941047.1	ILMN_2949122	005870725	S	882	GACAGATGTCAGCAGGGCCAGGTTCTGAGGGTGGTCTCTGAGCCAGCAGG	16	+	36092015-36092064	16qB3	Mus musculus coiled-coil domain containing 58 (Ccdc58), mRNA.				AI413631; MGC36453; A930007B11Rik	AI413631; MGC36453; A930007B11Rik
Mus musculus	RefSeq	ILMN_221455	ILMN_238927	CCDC58	NM_198645.1	NM_198645.1		381045	38348527	NM_198645.1	Ccdc58	NP_941047.1	ILMN_1221190	006270725	S	323	TATTTGCTGTCAGGCAGCACCGCGGACACCTCTGCTCCACGGTGATTGGT	16	+	36072093-36072142	16qB3	Mus musculus coiled-coil domain containing 58 (Ccdc58), mRNA.				AI413631; MGC36453; A930007B11Rik	AI413631; MGC36453; A930007B11Rik
Mus musculus	RefSeq	ILMN_209252	ILMN_209252	NRBP2	NM_144847.1	NM_144847.1		223649	21450054	NM_144847.1	Nrbp2	NP_659096.1	ILMN_2594031	000110561	S	2362	GCTTTGGTGCTTGGAGAACAGCCGTGGGCGGTGGGTGTTGTTACTGTGGT	15	-	75916108-75916157	15qD3	Mus musculus nuclear receptor binding protein 2 (Nrbp2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	MGC18994; BC011468; MGC12117	MGC18994; BC011468; MGC12117
Mus musculus	Riken	ILMN_205560	ILMN_205560	POLE	ri|6030411A04|PX00056M20|AK031352|4483					AK031352	Pole		ILMN_1251151	006650059	S	4271	GGGTCCTGGAGGATCAAATCCAGGTTCACATGGGCTAGAGAGATGGCTCG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	MEEBO	ILMN_190484	ILMN_190484	IGHV1S120_AF025443_IG_HEAVY_VARIABLE_1S120_8	IGHV1S120_AF025443_Ig_heavy_variable_1S120_8						IGHV1S120_AF025443_Ig_heavy_variable_1S120_8		ILMN_2470564	004150180	S	16	CTTTTTGGTAGCAACAGCAACAGGTGTCCACTCCCAGGTCCAACTGCAGC										
Mus musculus	RefSeq	ILMN_198575	ILMN_198575	LOC270220	XM_195260.2	XM_195260.2			38086280	XM_195260.2	LOC270220		ILMN_2532170	004860440	S	56	CAAAGGCCATGCAAGCTAAGAAGGCAGTGCTGAAATGCATCCACAGCCAC										
Mus musculus	Riken	ILMN_204820	ILMN_204820	TRRP4	ri|C530049P21|PX00083H02|AK049788|2788					AK049788	Trrp4		ILMN_2567864	001190279	S	2631	CTCTGAAGCCACTGAGTTTGCAACGACTTGGACCTTGGGGGTCCTTATGC										
Mus musculus	MEEBO	ILMN_195536	ILMN_195536	A330009N23RIK	scl0380977.1_1				51829923	XM_358477	A330009N23Rik		ILMN_2516455	006550088	S	11	GCCTCTCCAGAATGTCCCTTACCTCCTCATGCCTCTTAGCAAATCCCCTG										
Mus musculus	MEEBO	ILMN_195536	ILMN_195536	A330009N23RIK	scl0380977.1_1				51829923	XM_358477	A330009N23Rik		ILMN_2528907	005810403	S	381	AGGCACCCAGGACTCTCCAATCCTCCCTGGAGAAACTGTGGAACCGCAGA										
Mus musculus	RefSeq	ILMN_221174	ILMN_221174	S100A4	NM_011311.1	NM_011311.1		20198	33859623	NM_011311.1	S100a4	NP_035441.1	ILMN_2731901	005720646	S	113	GGCAAAGAGGGTGACAAGTTCAAGCTGAACAAGACAGAGCTCAAGGAGCT	3	+	90408994-90409043	3qF1	Mus musculus S100 calcium binding protein A4 (S100a4), mRNA.			Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IDA]	18A2; pk9a; 42a; FSp1; PeL98; Mts1; metastasin; Capl	18A2; pk9a; 42a; FSp1; PeL98; Mts1; metastasin; Capl
Mus musculus	MEEBO	ILMN_187682	ILMN_187682	TRPC6	scl37295.14.1_247				7305596	NM_013838	Trpc6		ILMN_2446212	006480273	S	4	TGATAACTTGGATCATTTAGAGTCCTAATATCAACTTTTTGGGTGATTAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IDA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 15279] [evidence IDA]		
Mus musculus	MEEBO	ILMN_224229	ILMN_224229	2810405K07RIK	scl18703.6_648				34328309	NM_028141	2810405K07Rik		ILMN_1252851	000160653	S	2871	GGCATACCTGAACTATCTTCTTAGCTAGATTGTAAGCATTTGGAGGTGTG										
Mus musculus	RefSeq	ILMN_214819	ILMN_224991	OLFR780	NM_146284.1	NM_146284.1		258281	22203772	NM_146284.1	Olfr780	NP_666396.1	ILMN_1240002	002340451	S	755	GCTGCATCTTCATCTACGTCAAACCGTCTGCAAAAGAAGCGGTGACCATT	10	+	128759435-128759484	10qD3	Mus musculus olfactory receptor 780 (Olfr780), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR114-12	MOR114-12
Mus musculus	RefSeq	ILMN_222305	ILMN_222305	PDE7B	NM_013875.2	NM_013875.2		29863	31543465	NM_013875.2	Pde7b	NP_038903.2	ILMN_2747728	005820470	S	3704	TGAAGAATTTGCGAAGTGGGTGGATGGCGCTGACGTCACTGATATGGGTG	10	-	20087803-20087852	10qA3	Mus musculus phosphodiesterase 7B (Pde7b), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211572	ILMN_320485	D430007I03	XM_001475878.1	XM_001475878.1		231989	149255133	XM_001475878.1	D430007I03	XP_001475928.1	ILMN_2756965	002570382	S	134	GCAGCTCTGGAGGATAGTGACTGTCATGATGCCCACTGTGAAAACATCAG	6	+	53171993-53172042	6qB3	PREDICTED: Mus musculus hypothetical protein D430007I03 (D430007I03), mRNA.					
Mus musculus	RefSeq	ILMN_197865	ILMN_318577	OTTMUSG00000010438	NM_001085540.1	NM_001085540.1		626943	148232055	NM_001085540.1	OTTMUSG00000010438	NP_001079009.1	ILMN_1253533	004780646	S	1333	CCCAAGTCAGTCTGCTTTGGTACCTATTCCTGTTATGACTGCGATACACA				4qE1	Mus musculus predicted gene, OTTMUSG00000010438 (OTTMUSG00000010438), mRNA.					
Mus musculus	MEEBO	ILMN_223511	ILMN_223511	6530421E24RIK	scl0403180.1_64	NM_207280.1			46402308	NM_207280.1	6530421E24Rik		ILMN_2764974	000510414	S	965	CTCTGGTCTGGAAGAATAGCCTTGTTTTTGGGTCATGCCCCTGCATGGGG										
Mus musculus	RefSeq	ILMN_190319	ILMN_190319	WNT1	NM_021279.4	NM_021279.4		22408	145386529	NM_021279.4	Wnt1	NP_067254.1	ILMN_2469090	004610575	S	2135	AAACTATTTATTGTGCTGGGTTCCAGCCTGGGTTGCAGAGACCACCCTCA				15qF1	Mus musculus wingless-related MMTV integration site 1 (Wnt1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; A developmental process occurring during brain development, independent of morphogenetic (shape) change, that is required for the midbrain-hindbrain boundary to attain its fully functional state. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate [goid 22004] [evidence IMP]; The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex [goid 21536] [evidence IGI]; The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain [goid 21797] [evidence IGI]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IGI]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IMP]; The process whereby a cell becomes capable of differentiating autonomously into a neuron regardless of its environment; upon determination, the cell fate cannot be reversed [goid 48664] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]	swaying; sw; Wnt-1; Int-1	swaying; sw; Wnt-1; Int-1
Mus musculus	RefSeq	ILMN_200524	ILMN_200524	LOC384335	XM_195563.3	XM_195563.3			38083187	XM_195563.3	LOC384335		ILMN_1243699	002060133	S	531	GGCTGCTGTTGAGTTGTGCCTCTGGTACTTCAGAGATGTGGTTAATGCAG										
Mus musculus	RefSeq	ILMN_239724	ILMN_239724	URB2	NM_001029876.1	NM_001029876.1		382038	71274161	NM_001029876.1	Urb2	NP_001025047.1	ILMN_2941972	002480367	S	5352	ACACTGTGCCGTCCTGTTGGGAATTCTAGTGGTGCTGGGGAACAGCCAGG	8	+	126571983-126572032	8qE2	Mus musculus URB2 ribosome biogenesis 2 homolog (S. cerevisiae) (Urb2), mRNA.				KIAA0133; mKIAA0133; C77575	KIAA0133; mKIAA0133; C77575
Mus musculus	RefSeq	ILMN_216386	ILMN_216386	H2-M3	NM_013819.2	NM_013819.2		14991	111074554	NM_013819.2	H2-M3	NP_038847.1	ILMN_2670508	001940338	S	946	CGTCATCATGGTCATCGTTGCTAGTCTGGTTCTCCTGGGAGGTGTGATCA	17	+	37409615-37409664	17qB1	Mus musculus histocompatibility 2, M region locus 3 (H2-M3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A transmembrane protein complex composed of a MHC class Ib alpha chain and, in most cases, an invariant beta2-microglobin chain, and with or without a bound peptide or lipid antigen. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families [goid 32398] [evidence IDA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity [goid 45954] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IMP]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family [goid 2476] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IMP]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class Ib molecule. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family [goid 2481] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [evidence IDA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family [goid 2477] [evidence IDA]; The change in morphology and behavior of an alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response [goid 2287] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity [goid 1916] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IMP]	Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IDA]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IDA]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IMP]	M3a; H-2M3; Hmt	M3a; H-2M3; Hmt
Mus musculus	RefSeq	ILMN_190565	ILMN_227725	IQCE	NM_028833.3	NM_028833.3		74239	118130547	NM_028833.3	Iqce	NP_083109.2	ILMN_2680876	002350274	S	4289	GTGTAGCAGCTCATCTATTAAAGGCAAAGCCTGTCTTGAAGCTGCCCCAG	5	-	141139479-141139528	5qG2	Mus musculus IQ motif containing E (Iqce), mRNA.				mKIAA1023; 1700028P05Rik	mKIAA1023; 1700028P05Rik
Mus musculus	Riken	ILMN_205095	ILMN_205095	ITGA6	ri|D630036F20|PX00197P19|AK052728|2742					AK052728	Itga6		ILMN_1232450	000830441	S	2315	GGAGGCCAACTAGGACCTGCTAACGCAGCTTGGAGAACACCCAGATTGTG						The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits [goid 33627] [evidence IDA]; Any process that activates or increases the rate or extent of cell adhesion to another cell [goid 22409] [evidence IDA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IMP]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IGI]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IPI]		
Mus musculus	RefSeq	ILMN_209418	ILMN_209418	ANLN	NM_028390.2	NM_028390.2		68743	142380043	NM_028390.2	Anln	NP_082666.1	ILMN_2763217	006400056	S	1758	GTTTTTAGAAGAAGAAAAATCCTTAAAAGTAGCATCAGACCTGGAGGTTG	9	-	22168445-22168494	9qA3	Mus musculus anillin, actin binding protein (Anln), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells. In animal cells, the contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis [goid 5826] [evidence ISO]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence ISO]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]	2900037I21Rik; Scraps; ANILLIN; C78101; 1110037A17Rik	2900037I21Rik; Scraps; ANILLIN; C78101; 1110037A17Rik
Mus musculus	RefSeq	ILMN_209418	ILMN_209418	ANLN	NM_028390.2	NM_028390.2		68743	142380043	NM_028390.2	Anln	NP_082666.1	ILMN_2768984	001440332	S	1419	ATTCAAACAAAACACATGCTCGTCTACTACCCATTTAGCACAGCAGCTCA	9	-	22177589-22177638	9qA3	Mus musculus anillin, actin binding protein (Anln), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells. In animal cells, the contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis [goid 5826] [evidence ISO]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence ISO]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]	2900037I21Rik; Scraps; ANILLIN; C78101; 1110037A17Rik	2900037I21Rik; Scraps; ANILLIN; C78101; 1110037A17Rik
Mus musculus	RefSeq	ILMN_209418	ILMN_209418	ANLN	NM_028390.2	NM_028390.2		68743	142380043	NM_028390.2	Anln	NP_082666.1	ILMN_2595597	001190201	S	4280	TTGCTTCCCAGAGTTCCTGTCTGAGGTCCTTTCATGTTTATCTATGACAC	9	-	22136731-22136780	9qA3	Mus musculus anillin, actin binding protein (Anln), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells. In animal cells, the contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis [goid 5826] [evidence ISO]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISO]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence ISO]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISO]	2900037I21Rik; Scraps; ANILLIN; C78101; 1110037A17Rik	2900037I21Rik; Scraps; ANILLIN; C78101; 1110037A17Rik
Mus musculus	RefSeq	ILMN_215968	ILMN_215968	DYM	NM_027727.2	NM_027727.2		69190	118130388	NM_027727.2	Dym	NP_082003.1	ILMN_2665797	004010037	S	2356	CGTGCTTCCCTCACACACTGTGACTATTGGGAGACTGCGCCAGTTAGCAG	18	+	75446505-75446554	18qE3	Mus musculus dymeclin (Dym), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC18957; C030019K18Rik; 4933427L07Rik; 1810041M12Rik	MGC18957; C030019K18Rik; 4933427L07Rik; 1810041M12Rik
Mus musculus	MEEBO	ILMN_195133	ILMN_195133	2610202A04RIK	scl0070444.1_4						2610202A04Rik		ILMN_2512881	006350047	S	20	TTGATGGAAGACATTGTGGATTTGGCAAAGAAAGTTGCAGTAAGTGGTAG										
Mus musculus	Riken	ILMN_207181	ILMN_207181	5730591F21RIK	ri|5730591F21|PX00645A16|AK077746|2015					AK077746	5730591F21Rik		ILMN_1231016	004120546	S	1647	ACATAAAGATACGACGCTGTTTTTCCTCTCAGGCGCTGACGACTCAGTTG										
Mus musculus	RefSeq	ILMN_239474	ILMN_239474	EG436240	NM_001034894.1	NM_001034894.1		436240	77861896	NM_001034894.1	EG436240	NP_001030066.1	ILMN_2818688	001770026	S	2693	CCAGGTGTTTGATGCATTCTAGGAAGACAGCTACACAAGGGTCAGGAGCC	X	+	148473062-148473111	XqF3	Mus musculus predicted gene, EG436240 (EG436240), mRNA.					
Mus musculus	MEEBO	ILMN_196076	ILMN_196076	D030074K08RIK	scl46823.1_203						D030074K08Rik		ILMN_1238604	001510431	S	2	CCATAGGTGTGGCTGGTTTTGCATGTGTTGTGTATGCATGTGTATGTGTG										
Mus musculus	Riken	ILMN_204559	ILMN_204559	TRIM2	ri|B930001C03|PX00162O09|AK046887|2360					AK046887	Trim2		ILMN_1254538	005910246	S	1924	GACATGACCACAACCACAAGGCAGAGAGAGACTGGGAATGGTAGGAGTCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]		
Mus musculus	RefSeq	ILMN_214871	ILMN_318969	4933417E01RIK	XM_001471751.1	XM_001471751.1		74463	149256079	XM_001471751.1	4933417E01Rik	XP_001471801.1	ILMN_1226326	000380070	S	1831	GATGAGCAGGAGAGGGGAACTGACTGTGGGCACTTGCACAATTCCACATG	7	+	20081742-20081791	7qA3	PREDICTED: Mus musculus RIKEN cDNA 4933417E01 gene (4933417E01Rik), mRNA.					
Mus musculus	MEEBO	ILMN_195555	ILMN_195555	TRIM9	scl0077484.1_181	NM_175257.2			31340745	NM_175257.2	Trim9		ILMN_1242561	000010064	S	1	GGCCTGACTTTCCAGGGCACTCTGCATTTCTTCCTCTATTCAAAGATCAA						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISO]	Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence ISO]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	MEEBO	ILMN_186710	ILMN_186710	IGHV6S2_K00692_IG_HEAVY_VARIABLE_6S2_37	IGHV6S2_K00692_Ig_heavy_variable_6S2_37						IGHV6S2_K00692_Ig_heavy_variable_6S2_37		ILMN_1233527	004780070	S	1	GCTTAGTTGGGCTTGGAGGATCCATGCAACGCTCTTGTGTAGACTCTGGA										
Mus musculus	RefSeq	ILMN_235235	ILMN_235235	4933407I18RIK	NM_001033160.2	NM_001033160.2		71121	142352565	NM_001033160.2	4933407I18Rik	NP_001028332.1	ILMN_3161087	003450605	S	2731	CTGAGAACAGTTTCCCCTACAGTGTACCTGCCTATGGTGGCAGTGTGCGT	9	+	59530734-59530783	9qB	Mus musculus RIKEN cDNA 4933407I18 gene (4933407I18Rik), mRNA.					
Mus musculus	MEEBO	ILMN_186646	ILMN_186646	CLECSF5	scl29093.7_12				10946691	NM_021364	Clecsf5		ILMN_1253273	006580162	S	697	GTTGTGACTGAAACCAGCCCAGGAAATATAGAGCATCAAAGACTGTGCCC										
Mus musculus	Riken	ILMN_202027	ILMN_202027	ICA1	ri|1700013M09|ZX00050M16|AK005965|962					AK005965	Ica1		ILMN_1258083	003870181	S	821	GGCCTGCAAAGCCGATAGCACTCACTCTTTGACCCTTCACAACTTGCCAG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence NAS]			
Mus musculus	RefSeq	ILMN_220224	ILMN_220224	PEX11B	NM_011069.2	NM_011069.2		18632	31981574	NM_011069.2	Pex11b	NP_035199.2	ILMN_1258372	003780753	S	1456	CCCAGGCTGATGCCATGTCTGGCCTCTTCCTGTAAATACTGTACAATGAT	3	+	96448093-96448142	3qF2.1	Mus musculus peroxisomal biogenesis factor 11b (Pex11b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISO]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments [goid 16559] [evidence IEA]			
Mus musculus	RefSeq	ILMN_211269	ILMN_255615	CREG1	NM_011804.2	NM_011804.2		433375	31542419	NM_011804.2	Creg1	NP_035934.1	ILMN_1239638	005130008	S	1543	TTTGACCCAACACCAACCATAACCCCAGCCCTTCTCGGGCACTCTGTATC	1	+	167704853-167704902	1qH2.3	Mus musculus cellular repressor of E1A-stimulated genes 1 (Creg1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IDA]	Creg; AA755314	Creg; AA755314
Mus musculus	Riken	ILMN_205679	ILMN_205679	D230002L24RIK	ri|D230002L24|PX00187O07|AK051807|3251					AK051807	D230002L24Rik		ILMN_1259227	002750343	S	2405	GGCCTGATTAGCATTGCACATTAGGGACCTCCATGCCATCTCTTCCTGAC										
Mus musculus	RefSeq	ILMN_198232	ILMN_317896	LOC639086	XR_034245.1	XR_034245.1		639086	149254444	XR_034245.1	LOC639086		ILMN_1245020	006620020	S	40	GCCAGGCTGTTAAGCTTGTATGGTCGATGCCTGTCAGCAGCGGGGGTGAT					PREDICTED: Mus musculus similar to NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial (LOC639086), misc RNA.					
Mus musculus	RefSeq	ILMN_211448	ILMN_316620	ZBTB11	XM_001480244.1	XM_001480244.1		271377	149267959	XM_001480244.1	Zbtb11	XP_001480294.1	ILMN_1258611	005340544	S	350	TTGCGGATCTTCCGCTTGACATTGCCCTCGGTGCCCGGCGCATAGGGCTC				16qC1.1	PREDICTED: Mus musculus zinc finger and BTB domain containing 11 (Zbtb11), mRNA.					
Mus musculus	RefSeq	ILMN_190853	ILMN_316620	ZBTB11	XM_001480244.1	XM_001480244.1		271377	149267959	XM_001480244.1	Zbtb11	XP_001480294.1	ILMN_1241132	002450176	S	296	AACGCGAGCCCTATGCGCCGGGCACCGAGGGCAATGTCAAGCGGAAGATC				16qC1.1	PREDICTED: Mus musculus zinc finger and BTB domain containing 11 (Zbtb11), mRNA.					
Mus musculus	MEEBO	ILMN_224304	ILMN_224304	ALDH4A1	scl24770.15_172				34328414	NM_175438	Aldh4a1		ILMN_1244242	006480288	S	2859	GAACTGCCAGAGTCTTGTCACGTGGTTCTGTGTGGTGTCGTGGGAGGGAG						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6560] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 1-pyrroline-5-carboxylate + NAD+ + H2O = L-glutamate + NADH + H+ [goid 3842] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]		
Mus musculus	RefSeq	ILMN_225980	ILMN_225980	EG209380	NM_001001318.1	NM_001001318.1		209380	47604973	NM_001001318.1	EG209380	NP_001001318.1	ILMN_2883277	006350465	S	762	CCACCAAAAGGACTTAGTGGCAAGGAGAGAAGAGCTTCTCAGGGTCCCCA	7	-	106217478-106217527	7qE3	Mus musculus predicted gene, EG209380 (EG209380), mRNA.					
Mus musculus	RefSeq	ILMN_185873	ILMN_185873	UMPS	NM_009471.1	NM_009471.1		22247	33859497	NM_009471.1	Umps	NP_033497.1	ILMN_2987878	001410445	S	2935	GAGGACGACTTACTATTCCACCCATTAAAACTAACAACAGTACCCTTGGC	16	-	33874993-33875042	16qB3	Mus musculus uridine monophosphate synthetase (Umps), mRNA.		The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]; The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4588] [evidence IEA]; Catalysis of the reaction: orotidine 5'-phosphate = UMP + CO2 [goid 4590] [evidence IEA]	1700095D23Rik; AA408257; BB164745; AL033308	1700095D23Rik; AA408257; BB164745; AL033308
Mus musculus	RefSeq	ILMN_198110	ILMN_261511	D5ERTD40E	NM_001010825.2	NM_001010825.2		231630	141803114	NM_001010825.2	D5Ertd40e	NP_001010825.1	ILMN_1224657	006060110	S	1515	TCGCCAACGAGGGTGACGTGCGGCCTTTCATCCGCTTCATAGCCAAGTGT	5	+	114188991-114189040	5qF	Mus musculus DNA segment, Chr 5, ERATO Doi 40, expressed (D5Ertd40e), mRNA.				MGC117722; Hype	MGC117722; Hype
Mus musculus	RefSeq	ILMN_195712	ILMN_261511	D5ERTD40E	NM_001010825.2	NM_001010825.2		231630	141803114	NM_001010825.2	D5Ertd40e	NP_001010825.1	ILMN_2518000	004880717	S	2928	CAGAGTATCTTTCTAAACGCTGGATACCATCGTTTGGTGGCTGGTATGAG	5	+	114190404-114190453	5qF	Mus musculus DNA segment, Chr 5, ERATO Doi 40, expressed (D5Ertd40e), mRNA.				MGC117722; Hype	MGC117722; Hype
Mus musculus	RefSeq	ILMN_222575	ILMN_222575	NUCKS1	NM_175294.2	NM_175294.2		98415	31341542	NM_175294.2	Nucks1	NP_780503.1	ILMN_2960214	000240767	S	2190	CTGCTTCCATACTGTGGAGTTGTTTGCTTCTTAGTTGGTCTGACCCCTCC	1	+	133829071-133829120	1qE4	Mus musculus nuclear casein kinase and cyclin-dependent kinase substrate 1 (Nucks1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			C78391; 8430423A01Rik; 2700010L10Rik; Nucks; AI647518	C78391; 8430423A01Rik; 2700010L10Rik; Nucks; AI647518
Mus musculus	RefSeq	ILMN_222575	ILMN_222575	NUCKS1	NM_175294.2	NM_175294.2		98415	31341542	NM_175294.2	Nucks1	NP_780503.1	ILMN_2751761	001240441	S	1891	CTTCCTGTTTTTGGGTAGTTTCACCAATGATCCAAAATTAAAAAGAGATT	1	+	133828772-133828821	1qE4	Mus musculus nuclear casein kinase and cyclin-dependent kinase substrate 1 (Nucks1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			C78391; 8430423A01Rik; 2700010L10Rik; Nucks; AI647518	C78391; 8430423A01Rik; 2700010L10Rik; Nucks; AI647518
Mus musculus	RefSeq	ILMN_198725	ILMN_256249	DKC1	NM_001030307.1	NM_001030307.1		245474	91064866	NM_001030307.1	Dkc1	NP_001025478.1	ILMN_1238284	005910674	S	2659	TTCCTGTTAGATTTACTATGATAATCTTGGACTGGCAACAAAAGTGAGAG	X	+	72351068-72351111:72351605-72351610	XqA7.3	Mus musculus dyskeratosis congenita 1, dyskerin homolog (human) (Dkc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IC ]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence TAS]; The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence TAS]; The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence ISA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence TAS]; Interacting selectively with a protein constituent of a small nucleolar ribonucleoprotein particle [goid 30519] [evidence ISS]; Catalysis of the reaction: uracil + D-ribose 5-phosphate = pseudouridine 5'-phosphate + H2O [goid 4730] [evidence TAS]	BC068171; RP23-62O13.1; MGC107501	BC068171; RP23-62O13.1; MGC107501
Mus musculus	RefSeq	ILMN_256249	ILMN_256249	DKC1	NM_001030307.1	NM_001030307.1		245474	91064866	NM_001030307.1	Dkc1	NP_001025478.1	ILMN_2992965	007610592	S	281	GAAATACAACATGCTGAAGAATTTCTTATCAAACCAGAATCTAAAGTGGC	X	+	72341339-72341388	XqA7.3	Mus musculus dyskeratosis congenita 1, dyskerin homolog (human) (Dkc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IC ]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence TAS]; The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence TAS]; The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence ISA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence TAS]; Interacting selectively with a protein constituent of a small nucleolar ribonucleoprotein particle [goid 30519] [evidence ISS]; Catalysis of the reaction: uracil + D-ribose 5-phosphate = pseudouridine 5'-phosphate + H2O [goid 4730] [evidence TAS]	BC068171; RP23-62O13.1; MGC107501	BC068171; RP23-62O13.1; MGC107501
Mus musculus	RefSeq	ILMN_190595	ILMN_260913	SLC5A1	NM_019810.3	NM_019810.3		20537	141802859	NM_019810.3	Slc5a1	NP_062784.2	ILMN_2715270	000130561	S	3677	TCCCTGTAAGCTGTGCTGAGAAAAGGGGAGATTGGGGAACCACCCATGTC	5	+	33505107-33505156	5qB1	Mus musculus solute carrier family 5 (sodium/glucose cotransporter), member 1 (Slc5a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IMP]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence ISO]; Any process by which nutrients are taken up from the contents of the intestine [goid 50892] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IMP]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + Na+(out) = glucose(in) + Na+(in) [goid 5412] [evidence ISO]	Sglt1	Sglt1
Mus musculus	RefSeq	ILMN_194680	ILMN_225408	PEX11C	NM_026951.2	NM_026951.2		69129	141802274	NM_026951.2	Pex11c	NP_081227.1	ILMN_2508626	006330347	S	784	TGAGCACCACAGTGTCCTCCACCTGCCACTTCAGGGCCTCATCAAGGGCT	8	-	3459109-3459158	8qA1.1	Mus musculus peroxisomal biogenesis factor 11c (Pex11c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments [goid 16559] [evidence IEA]		1810022F11Rik; 1810049N02Rik	1810022F11Rik; 1810049N02Rik
Mus musculus	RefSeq	ILMN_188580	ILMN_225408	PEX11C	NM_026951.2	NM_026951.2		69129	141802274	NM_026951.2	Pex11c	NP_081227.1	ILMN_2715661	000110605	S	811	ATCACTGGCCACTGGTGCATCCATAAGTGTGTACTCCGGTGCTGGCCCCT	8	-	3459082-3459131	8qA1.1	Mus musculus peroxisomal biogenesis factor 11c (Pex11c), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments [goid 16559] [evidence IEA]		1810022F11Rik; 1810049N02Rik	1810022F11Rik; 1810049N02Rik
Mus musculus	RefSeq	ILMN_187708	ILMN_187708	USP52	NM_133992.2	NM_133992.2		103135	142380546	NM_133992.2	Usp52	NP_598753.1	ILMN_1245461	004540682	S	4047	GGCCAGAAACAAAGCCTAAAGTGACCCAGGTGGAGTGATTGGTGTTCGTA	10	+	127758011-127758060	10qD3	Mus musculus ubiquitin specific peptidase 52 (Usp52), mRNA.				AW742773; 1200014O24Rik; mKIAA0710; AI047843	AW742773; 1200014O24Rik; mKIAA0710; AI047843
Mus musculus	RefSeq	ILMN_190495	ILMN_255052	WHSC1	XM_991589.1	XM_991589.1		107823	94374392	XM_991589.1	Whsc1	XP_996683.1	ILMN_1236987	000510386	S	4181	GTATGCATTAGCACTACTAAACCCCACAGTGAGTTTACAAGTGTATAGTG				5qB2	PREDICTED: Mus musculus Wolf-Hirschhorn syndrome candidate 1 (human), transcript variant 21 (Whsc1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189597	ILMN_189597	SCL0001487.1_50	scl0001487.1_50	AK075947.1			26344853	AK075947.1	scl0001487.1_50		ILMN_1246268	005700563	S	3	GAGGAGCCAGACGCCCAGATCCCTCTCGCTGCGTTTCCCCAAAATAGTTC										
Mus musculus	RefSeq	ILMN_221451	ILMN_221451	SMARCA4	NM_011417.2	NM_011417.2		20586	76253778	NM_011417.2	Smarca4	NP_035547.2	ILMN_2735792	004810370	S	5289	TACCAGCATTAACTGTCTAGAGAGGGGACCTCCTGGGAGCACCATCCACC	9	+	21507596-21507645	9qA3	Mus musculus SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (Smarca4), mRNA.	A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence TAS]	Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence TAS]; Process by which a cell becomes capable of differentiating autonomously into a glial cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 7403] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IMP]; The hatching of the cellular blastocyst from the zona pellucida [goid 1835] [evidence IMP]; An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation [goid 1832] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IMP]; The process by which the anatomical structures of the epidermis are generated and organized. Morphogenesis pertains to the creation of form. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 48730] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence TAS]	Brg1; HP1-BP72; SW1/SNF; SNF2beta	Brg1; HP1-BP72; SW1/SNF; SNF2beta
Mus musculus	RefSeq	ILMN_205527	ILMN_310868	LOC100045738	XM_001474843.1	XM_001474843.1		100045738	149255966	XM_001474843.1	LOC100045738	XP_001474893.1	ILMN_1244087	000110564	S	1647	TGGCTGCTCCGAGAATGGGGAGGTTGGCCTTTTCCTCTGAGACTGTCCTC					PREDICTED: Mus musculus hypothetical protein LOC100045738 (LOC100045738), mRNA.					
Mus musculus	Riken	ILMN_207405	ILMN_207405	G630052O08RIK	ri|G630052O08|PL00013H12|AK090330|3566					AK090330	G630052O08Rik		ILMN_2587355	000870129	S	2410	AACCGTCCAGCTCAGCACTGCCCCCTGAAGAGTCAGCAGACCTGGTTAAG										
Mus musculus	Riken	ILMN_205843	ILMN_205843	A730028E04RIK	ri|A730028E04|PX00149N16|AK042829|1270					AK042829	A730028E04Rik		ILMN_1213620	005310474	S	809	CAAATGTGTACCTTCCAGCCTCTTCTTGTAGAGGAGCACCTGTCTAGAGG										
Mus musculus	RefSeq	ILMN_215110	ILMN_313386	3110043A19RIK	XM_001476479.1	XM_001476479.1		73216	149261912	XM_001476479.1	3110043A19Rik	XP_001476529.1	ILMN_2655625	003170224	S	536	TTCAAGGTGGCTTAATGCGAGCTTCTTGCCTTTAGATCCCCAGCTCGACT	11	-	61317972-61317987:61317988-61318021	11qB2	PREDICTED: Mus musculus RIKEN cDNA 3110043A19 gene (3110043A19Rik), mRNA.					
Mus musculus	Riken	ILMN_205742	ILMN_205742	A330084H10RIK	ri|A330084H10|PX00133H03|AK039678|1390					AK039678	A330084H10Rik		ILMN_1251788	003890450	S	1311	GTTCAGGAGCTAGGACTGAAAGTCCACAGCAGAGTGCCTTCCAGCACTCG										
Mus musculus	RefSeq	ILMN_196548	ILMN_196548	A330068P14	XM_354620.1	XM_354620.1			38091448	XM_354620.1	A330068P14		ILMN_2524779	003890181	S	1473	TCTTCCACTGTGCAGATCCCTCTGCTTCACGGCTTGAGCCACTGCTGGAG										
Mus musculus	RefSeq	ILMN_238230	ILMN_238230	AI427809	NM_001033454.1	NM_001033454.1		381524	85701972	NM_001033454.1	AI427809	NP_001028626.1	ILMN_2871929	002320564	S	1480	CCTGTTGCACAGTTGAGGGCCAGCTGCAAGCCTATCCTGAGGCCACCTGT	4	-	53282959-53283008	4qB2	Mus musculus expressed sequence AI427809 (AI427809), mRNA.				Gm1659	Gm1659
Mus musculus	Riken	ILMN_206377	ILMN_206377	4732434K02RIK	ri|4732434K02|PX00050D24|AK028686|3742					AK028686	4732434K02Rik		ILMN_1249957	000840156	S	3377	GCCTGATACCCACAGAGCTTAGGAAGAGGGCATTGCATCTCCTTGGAACT										
Mus musculus	RefSeq	ILMN_199093	ILMN_315976	LOC633979	XR_032514.1	XR_032514.1		633979	149260699	XR_032514.1	LOC633979		ILMN_1250284	004860746	S	1510	AGGTTCCCTGGTGCCCCAAAACATGGAGGATGGATTGTGGAGAACTTCCC	10	+	41077329-41077378	10qB1	PREDICTED: Mus musculus similar to hCG2030702 (LOC633979), misc RNA.					
Mus musculus	RefSeq	ILMN_218091	ILMN_218091	8430408G22RIK	NM_145980.1	NM_145980.1		213393	22122424	NM_145980.1	8430408G22Rik	NP_666092.1	ILMN_2894211	005550161	S	1066	GTGACCACCTCCCAGATTGCTCTAATGAGGAGATGCGGGCTGTACTCTGG	6	+	116602629-116602678	6qE3	Mus musculus RIKEN cDNA 8430408G22 gene (8430408G22Rik), mRNA.				MGC6835; Fseg	MGC6835; Fseg
Mus musculus	RefSeq	ILMN_198350	ILMN_198350	HAK-PENDING	XM_128981.2	XM_128981.2			38084171	XM_128981.2	Hak-pending		ILMN_2728584	007200242	S	5023	GTTGTTATCAGTGTCACCGACGCTATTGTTGCTGGAGGCGGCTTCCCAGA										
Mus musculus	RefSeq	ILMN_198350	ILMN_198350	HAK-PENDING	XM_128981.2	XM_128981.2			38084171	XM_128981.2	Hak-pending		ILMN_2531379	006200136	S	3382	GCTGAAGGGAAAGCTCCAGTATTGCTGAAGAGGATCCAGGCCGAGATGGC										
Mus musculus	RefSeq	ILMN_201227	ILMN_328258	RIPPLY2	NM_001037907.1	NM_001037907.1		382089	149999373	NM_001037907.1	Ripply2	NP_001032996.1	ILMN_1250174	005570131	S	105	TTCTGGAGACCGTGGGTTCGAACTCCTGGAGAGAAAGAGAAGCGGACGGG				9qE3.1	Mus musculus ripply2 homolog (zebrafish) (Ripply2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment, maintenance and elaboration of the rostro-caudal axis of a somite, prior to the morphological formation of a somite boundary [goid 32525] [evidence IDA]; The establishment, maintenance and elaboration of a pattern along a line or a point [goid 9798] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IMP]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IMP]; The process by which the anatomical structures of the tail are generated and organized. Morphogenesis pertains to the creation of form. The tail is the hindmost part of some animals [goid 35121] [evidence IMP]		Ripply2; Gm1122	Ripply2; Gm1122
Mus musculus	RefSeq	ILMN_261795	ILMN_261795	DIRAS2	NM_001024474.2	NM_001024474.2		68203	114326529	NM_001024474.2	Diras2	NP_001019645.1	ILMN_2926480	003990196	S	4179	ATGTGAGACGCCGGCACATGCTTCCACTGCAGCCCTTGCTGTTTCGGTTC	13	-	52599863-52599912	13qA5	Mus musculus DIRAS family, GTP-binding RAS-like 2 (Diras2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2900052J15Rik; AI414999	2900052J15Rik; AI414999
Mus musculus	RefSeq	ILMN_222635	ILMN_222635	NUP98	NM_022979.1	NM_022979.1		269966	39930412	NM_022979.1	Nup98	NP_075355.1	ILMN_2904080	003130754	S	3569	GGGTCCCAACTGGACTCTTGCTAATAGTGGAGAACAACTGCATGGCTCCC	7	-	109283150-109283199	7qE3	Mus musculus nucleoporin 98 (Nup98), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			AI849286; 4732457F17; MGC118567	AI849286; 4732457F17; MGC118567
Mus musculus	RefSeq	ILMN_222635	ILMN_222635	NUP98	NM_022979.1	NM_022979.1		269966	39930412	NM_022979.1	Nup98	NP_075355.1	ILMN_2904083	004250519	S	3636	CAGGTTGCCGATTCTATGGAATATGGATTCCTGCCCAATCCAGTAGCTGT	7	-	109283083-109283132	7qE3	Mus musculus nucleoporin 98 (Nup98), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			AI849286; 4732457F17; MGC118567	AI849286; 4732457F17; MGC118567
Mus musculus	RefSeq	ILMN_213073	ILMN_213073	PIN1	NM_023371.2	NM_023371.2		23988	31543480	NM_023371.2	Pin1	NP_075860.1	ILMN_2927543	000290088	S	3712	GGCGTGCGCTACCACTGCCCAGCTCATAAAACTATTTTTGTTGCTCCTTC	9	+	20470932-20470981	9qA3	Mus musculus protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 (Pin1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	0610025L01Rik; D9Bwg1161e	0610025L01Rik; D9Bwg1161e
Mus musculus	RefSeq	ILMN_193084	ILMN_228048	BTRC	NM_001037758.1	NM_001037758.1		12234	83649722	NM_001037758.1	Btrc	NP_001032847.1	ILMN_1251041	001190441	S	2892	AATAAAAAGCATTGTGCTTCATCTTAAATCACTGGCGAGGCTTGGCCTGC	19	+	45604417-45604466	19qC3	Mus musculus beta-transducin repeat containing protein (Btrc), transcript variant 1, mRNA.			Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	b-TrCP; KIAA4123; Beta-Trcp1; mSlimb; Slimb; FWD1; mKIAA4123; Fbw1a; beta-TrCP	b-TrCP; KIAA4123; Beta-Trcp1; mSlimb; Slimb; FWD1; mKIAA4123; Fbw1a; beta-TrCP
Mus musculus	RefSeq	ILMN_228048	ILMN_228048	BTRC	NM_001037758.1	NM_001037758.1		12234	83649722	NM_001037758.1	Btrc	NP_001032847.1	ILMN_3100042	001850528	A	2087	CCTGCTCGGCACCGGCTGCCTCAGTGCTGCTATCAGAAGATGTCTTTATC	19	+	45603612-45603661	19qC3	Mus musculus beta-transducin repeat containing protein (Btrc), transcript variant 1, mRNA.			Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	b-TrCP; KIAA4123; Beta-Trcp1; mSlimb; Slimb; FWD1; mKIAA4123; Fbw1a; beta-TrCP	b-TrCP; KIAA4123; Beta-Trcp1; mSlimb; Slimb; FWD1; mKIAA4123; Fbw1a; beta-TrCP
Mus musculus	RefSeq	ILMN_228048	ILMN_228048	BTRC	NM_001037758.1	NM_001037758.1		12234	83649722	NM_001037758.1	Btrc	NP_001032847.1	ILMN_3027079	002350725	I	2927	CGAGGCTTGGCCTGCACAAAGGCTTGGAATAGCCAGCACCAGGCACCACT	19	+	45604452-45604501	19qC3	Mus musculus beta-transducin repeat containing protein (Btrc), transcript variant 1, mRNA.			Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	b-TrCP; KIAA4123; Beta-Trcp1; mSlimb; Slimb; FWD1; mKIAA4123; Fbw1a; beta-TrCP	b-TrCP; KIAA4123; Beta-Trcp1; mSlimb; Slimb; FWD1; mKIAA4123; Fbw1a; beta-TrCP
Mus musculus	RefSeq	ILMN_223643	ILMN_223643	P2RY5	NM_175116.2	NM_175116.2		67168	31341175	NM_175116.2	P2ry5	NP_780325.1	ILMN_2792601	006590286	S	1734	GCAATATAAGCTGCCTGACTAAGCCACTGGGACTGCTCCGTGTTCAACTG	14	+	71973783-71973790:71973791-71973832	14qD3	Mus musculus purinergic receptor P2Y, G-protein coupled, 5 (P2ry5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	2610302I02Rik; P2y5	2610302I02Rik; P2y5
Mus musculus	RefSeq	ILMN_199780	ILMN_199780	LOC383007	XM_356795.1	XM_356795.1			38077222	XM_356795.1	LOC383007		ILMN_2536458	006380035	S	396	AGTCTTCAGACAGAGGATTCCCCGTGAGTTACAGCAAGGCTCGTGCAGCC										
Mus musculus	RefSeq	ILMN_220709	ILMN_220709	STFA3	NM_025288.2	NM_025288.2		20863	142352955	NM_025288.2	Stfa3	NP_079564.1	ILMN_2725608	001980064	S	182	CAAGTCGTTGCTGGACAAAATTTGTTCATTAAGATAGATGTAGGGAATGG	16	-	36450803-36450820:36452237-36452268	16qB3	Mus musculus stefin A3 (Stfa3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	MGC130146; MGC130145; Stf3	MGC130146; MGC130145; Stf3
Mus musculus	MEEBO	ILMN_217681	ILMN_217681	CEACAM11	scl33029.4.1_48	NM_023289.1			12963618	NM_023289.1	Ceacam11		ILMN_1242002	000990167	S	969	AGAGTCGAAGACGAGCGGCAGACATGTGCGATTCTTCCATTACTTCCGTT							Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_210467	ILMN_231482	LOC637011	XM_993185.1	XM_993185.1		637011	94378750	XM_993185.1	LOC637011	XP_998279.1	ILMN_2605910	004640010	S	290	GCATGCAGCCTGAAGATACCGCAACTTATTTCTGTAAACAGGCTTATGAC					PREDICTED: Mus musculus similar to Ig kappa chain V-V region K2 precursor (LOC637011), mRNA.					
Mus musculus	RefSeq	ILMN_212595	ILMN_212595	A330021E22RIK	NM_172447.2	NM_172447.2		207686	142348359	NM_172447.2	A330021E22Rik	NP_766035.1	ILMN_2714209	007150563	S	2998	ACTGAATGATCCTAAAAAGAGCATCCCTACATGATGTGTTCCACAGCTCC	5	-	5581179-5581195:5581196-5581228	5qA1	Mus musculus RIKEN cDNA A330021E22 gene (A330021E22Rik), mRNA.				AI427898; 4921525K03	AI427898; 4921525K03
Mus musculus	RefSeq	ILMN_212595	ILMN_212595	A330021E22RIK	NM_172447.2	NM_172447.2		207686	142348359	NM_172447.2	A330021E22Rik	NP_766035.1	ILMN_2628236	004610047	S	2978	CGGGTGAAAGTGAAGCCACCACTGAATGATCCTAAAAAGAGCATCCCTAC	5	-	5581199-5581248	5qA1	Mus musculus RIKEN cDNA A330021E22 gene (A330021E22Rik), mRNA.				AI427898; 4921525K03	AI427898; 4921525K03
Mus musculus	RefSeq	ILMN_215148	ILMN_215148	TMEM179B	NM_026325.2	NM_026325.2		67706	142353761	NM_026325.2	Tmem179b	NP_080601.1	ILMN_2656071	000130382	S	443	CCCAGAAAACCTCATGGACACCTTCAGGAACTGCTGTGCAGTTTTACTCC	19	-	8847535-8847584	19qA	Mus musculus transmembrane protein 179B (Tmem179b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC151340; MGC151338; 0610031L02Rik; 1500003K22Rik	MGC151340; MGC151338; 0610031L02Rik; 1500003K22Rik
Mus musculus	RefSeq	ILMN_201032	ILMN_201032	LOC384717	XM_357813.1	XM_357813.1			38088037	XM_357813.1	LOC384717		ILMN_1259391	001990543	S	656	GGCAGCAAAAATCAGAGGCTGACAAGAATGCCAAGTCAGTGAAGGGTTTG										
Mus musculus	RefSeq	ILMN_196083	ILMN_238683	A730098P11RIK	XM_893769.3	XM_893769.3		624582	149267506	XM_893769.3	A730098P11Rik	XP_898862.1	ILMN_2521488	005550767	S	3379	ACACTTGACTTCAGTGGACATGTTATTAATTGTGGTGGTGGCTTCTGGCA	16	+	24532803-24532852	16qB1	PREDICTED: Mus musculus RIKEN cDNA A730098P11 gene, transcript variant 1 (A730098P11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216587	ILMN_216587	PCDHGC5	NM_033583.3	NM_033583.3		93708	118130787	NM_033583.3	Pcdhgc5	NP_291061.1	ILMN_2672878	005860477	S	2438	AGAGCCATTGCTACAGGACCTGCTTTTCTCCGGCCTCGGATGGCAGTGAC	18	+	37981637-37981686	18qB3	Mus musculus protocadherin gamma subfamily C, 5 (Pcdhgc5), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_246838	ILMN_246838	DBNDD2	NM_001048227.1	NM_001048227.1		52840	115299763	NM_001048227.1	Dbndd2	NP_001041692.1	ILMN_3050451	002450102	I	27	TGGGCAGCAGCTGACCCTGCTTCCCCATCTCGCACCTTCTGGAGAAGTGT	2	+	164311666-164311715	2qH3	Mus musculus dysbindin (dystrobrevin binding protein 1) domain containing 2 (Dbndd2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2900022J10Rik; R74724; AU041050; AW048677; D2Bwg0891e; RP23-140D14.3; 1110017A21Rik	2900022J10Rik; R74724; AU041050; AW048677; D2Bwg0891e; RP23-140D14.3; 1110017A21Rik
Mus musculus	RefSeq	ILMN_211876	ILMN_211876	BC022623	NM_177632.2	NM_177632.2		224093	31341258	NM_177632.2	BC022623	NP_808300.1	ILMN_1260286	004670192	S	2951	GTTGTACGGTTGTATATATGGAAATGTGTATAAAACATTTTGTTATTTTT	16	+	30602759-30602808	16qB2	Mus musculus cDNA sequence BC022623 (BC022623), mRNA.					
Mus musculus	RefSeq	ILMN_235033	ILMN_235033	CACNG2	NM_007583.1	NM_007583.1		12300	6680825	NM_007583.1	Cacng2	NP_031609.1	ILMN_2778812	003520411	S	1152	GTGGGCGTGAAGGGCTTCAACACCCTGCCGTCCACGGAGATCTCCATGTA	15	-	77825738-77825787	15qE1	Mus musculus calcium channel, voltage-dependent, gamma subunit 2 (Cacng2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IGI]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IMP]; The process in which membrane potential changes in the hyperpolarizing direction from the resting potential, usually from negative to more negative [goid 60081] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [evidence IMP]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IMP]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	stg; B930041E13Rik; B230105C07Rik; AW060990; stargazer; MGC123981; stargazin; wag; waggler	stg; B930041E13Rik; B230105C07Rik; AW060990; stargazer; MGC123981; stargazin; wag; waggler
Mus musculus	RefSeq	ILMN_217461	ILMN_217461	CAR9	NM_139305.2	NM_139305.2		230099	145046219	NM_139305.2	Car9	NP_647466.2	ILMN_1244145	006550072	S	1388	CTGCCTGTTATACAGCCTCCTTTTTAACCACTACGAAATCATTTCCATCT	4	+	43526026-43526075	4qB1	Mus musculus carbonic anhydrase 9 (Car9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; The regulated release of a substance by a cell, a group of cells, or a tissue [goid 46903] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	CAIX; MN/CA9	CAIX; MN/CA9
Mus musculus	RefSeq	ILMN_217461	ILMN_217461	CAR9	NM_139305.2	NM_139305.2		230099	145046219	NM_139305.2	Car9	NP_647466.2	ILMN_2730999	005220022	S	728	ACCTCAGTACTGCTTTCTCCGAACTTCATGAAGCCTTGGGCCGCCCAGGA	4	+	43522003-43522052	4qB1	Mus musculus carbonic anhydrase 9 (Car9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IMP]; The regulated release of a substance by a cell, a group of cells, or a tissue [goid 46903] [evidence IMP]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]	CAIX; MN/CA9	CAIX; MN/CA9
Mus musculus	RefSeq	ILMN_221535	ILMN_221535	PDIA3	NM_007952.2	NM_007952.2		14827	112293263	NM_007952.2	Pdia3	NP_031978.2	ILMN_2736875	003460356	S	1425	GTCATAGCCAAGATGGATGCCACAGCCAATGATGTGCCTTCTCCATATGA	2	+	121261678-121261727	2qE5	Mus musculus protein disulfide isomerase associated 3 (Pdia3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IMP]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [evidence IEA]	Grp58; PLC[a]; PDI; Plca; ERp60; PDI-Q2; 58kDa; ERp57; Erp; PI-PLC; ERp61	Grp58; PLC[a]; PDI; Plca; ERp60; PDI-Q2; 58kDa; ERp57; Erp; PI-PLC; ERp61
Mus musculus	RefSeq	ILMN_214435	ILMN_214435	OPRS1	NM_011014.1	NM_011014.1		18391	6754941	NM_011014.1	Oprs1	NP_035144.1	ILMN_2796651	006020524	S	1376	CCACTACGGAGACCCTTGTTGGGGTTAGAATGGGAAAGCTGGCTAGTGCC	4	-	41927172-41927221	4qA5	Mus musculus opioid receptor, sigma 1 (Oprs1), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ergosterol, (22E)-ergosta-5,7,22-trien-3-beta-ol, a sterol found in ergot, yeast and moulds [goid 6696] [evidence IEA]	Catalysis of the reaction which results in unsaturation at C-7 in the B ring of sterols [goid 247] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IDA]	AL024364; mSigmaR1	AL024364; mSigmaR1
Mus musculus	RefSeq	ILMN_215877	ILMN_215877	H1FNT	NM_027304.1	NM_027304.1		70069	24111223	NM_027304.1	H1fnt	NP_081580.1	ILMN_2664702	001660646	S	1112	CAGAAACCAGCTCTGGACAACGCTCCCAGCATACAAGGAAAAGCATGCAC	15	-	98086549-98086598	15qF1	Mus musculus H1 histone family, member N, testis-specific (H1fnt), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	1700026P10Rik; Hanp1; H1t2; mH1t2	1700026P10Rik; Hanp1; H1t2; mH1t2
Mus musculus	RefSeq	ILMN_211031	ILMN_211031	SERPINB6B	NM_011454.1	NM_011454.1		20708	15826843	NM_011454.1	Serpinb6b	NP_035584.1	ILMN_2611755	005820056	S	1736	CCTCTCTGCAGCAATACTGGGATCTCAATTTTTTGGTTACTTAGTAATTT	13	+	33070783-33070832	13qA3.3	Mus musculus serine (or cysteine) peptidase inhibitor, clade B, member 6b (Serpinb6b), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ovalbumin; NK13; Spi12	ovalbumin; NK13; Spi12
Mus musculus	RefSeq	ILMN_221792	ILMN_221792	AF366264	NM_153093.2	NM_153093.2		231201	83281196	NM_153093.2	AF366264	NP_694733.2	ILMN_2935093	006480040	S	366	GCCTGGGTTGGAGATGAAGCCCGAAGCTTCAGCAATAGGGCAAACCCGAA	8	-	13837964-13838013	8qA1.1	Mus musculus cDNA sequence AF366264 (AF366264), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	SUSP4; SUMO-1	SUSP4; SUMO-1
Mus musculus	MEEBO	ILMN_224085	ILMN_224085	E430002G05RIK	scl20561.14_317				31982079	NM_173749	E430002G05Rik		ILMN_2774507	002940577	S	2400	GGCTCCTGGTTTCAGGGACTTATCTCAATAGAGGGTGAACAGAGTTTACT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209553	ILMN_209553	LUZP1	NM_024452.2	NM_024452.2		269593	119433662	NM_024452.2	Luzp1	NP_077772.2	ILMN_2718645	004040484	S	7218	TTACGCATGATAGGTCCTTTGCTGGGGCCTCAGCTGTTGGTCTACACCTG	4	+	136104922-136104971	4qD3	Mus musculus leucine zipper protein 1 (Luzp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mFLJ00226; AI266952; 2700072H04Rik; Luzp	mFLJ00226; AI266952; 2700072H04Rik; Luzp
Mus musculus	RefSeq	ILMN_209553	ILMN_209553	LUZP1	NM_024452.2	NM_024452.2		269593	119433662	NM_024452.2	Luzp1	NP_077772.2	ILMN_2942276	002000338	S	7393	CAGGCAGTGGCTCAGGGCTCCTTGGGTGCATGTGTATAGTTGAAGCTGCC	4	+	136105097-136105146	4qD3	Mus musculus leucine zipper protein 1 (Luzp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	mFLJ00226; AI266952; 2700072H04Rik; Luzp	mFLJ00226; AI266952; 2700072H04Rik; Luzp
Mus musculus	RefSeq	ILMN_221056	ILMN_221056	MBD3	NM_013595.2	NM_013595.2		17192	118129898	NM_013595.2	Mbd3	NP_038623.1	ILMN_2730498	003370110	S	835	TCTCTGCAGCCGTGGAGAAGAACCCTGGTGTGTGGCTGAACACTGCACAG	10	-	79856678-79856727	10qC1	Mus musculus methyl-CpG binding domain protein 3 (Mbd3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [evidence IPI]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IDA]	Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	AI181826; AU019209	AI181826; AU019209
Mus musculus	RefSeq	ILMN_219542	ILMN_219542	ITGB3	NM_016780.1	NM_016780.1		16416	7949056	NM_016780.1	Itgb3	NP_058060.1	ILMN_3002896	001740451	S	1941	GAAGGAGTGTGTGGAGTGTAAGAAGTTCAACCGGGGAACGCTCCATGAAG	11	+	104520257-104520259:104521350-104521396	11qE1	Mus musculus integrin beta 3 (Itgb3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an integrin [goid 5178] [evidence IPI]	MGC159223; CD61; MGC159221; INGRB3	MGC159223; CD61; MGC159221; INGRB3
Mus musculus	RefSeq	ILMN_197450	ILMN_197450	LOC380890	XM_358453.1	XM_358453.1			38075913	XM_358453.1	LOC380890		ILMN_2528177	003120674	S	355	CTTCCAGAAGAATCCCAAGGGAGCGAGAGTGACTGGGAGGACCTGGACGA										
Mus musculus	RefSeq	ILMN_201513	ILMN_201513	PTCRA	NM_011195.1	NM_011195.1		19208	6755215	NM_011195.1	Ptcra	NP_035325.1	ILMN_1254670	005360672	S	841	GCCCAGAACTCACGATCCCCCCTCAGTGCTCCTTGTTCAAAGTGGGGGTT	17	-	46893004-46893053	17qC	Mus musculus pre T-cell antigen receptor alpha (Ptcra), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	pT-alpha; pTalpha; pT[a]	pT-alpha; pTalpha; pT[a]
Mus musculus	MEEBO	ILMN_192867	ILMN_192867	1810062O18RIK	scl46595.6.1_121						1810062O18Rik		ILMN_1237579	005420021	S	17	CCTTATGGTCACGATGCCATTTTCCCTTGGAGCTCTCGCTTTCCAGTTTG										
Mus musculus	RefSeq	ILMN_203161	ILMN_260418	LOC669420	XM_974942.1	XM_974942.1		669420	94395952	XM_974942.1	LOC669420	XP_980036.1	ILMN_1237118	000130575	S	1064	GGGTCCCTTTCTGCTCCCATGAAGCCTGAACAGATACCGTTCCAGATGAG					PREDICTED: Mus musculus hypothetical protein LOC669420 (LOC669420), mRNA.					
Mus musculus	RefSeq	ILMN_215606	ILMN_312611	DDX10	XM_001481328.1	XM_001481328.1		77591	149259637	XM_001481328.1	Ddx10	XP_001481378.1	ILMN_2661504	001850088	S	3032	TGAAACATCAAGGAACGTACTCAGAATAAGGACGTATTGTATACTGTTAG				9qA5.3	PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 (Ddx10), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]		
Mus musculus	RefSeq	ILMN_205859	ILMN_312611	DDX10	XM_001481328.1	XM_001481328.1		77591	149259637	XM_001481328.1	Ddx10	XP_001481378.1	ILMN_1228007	004070167	S	1286	TTCAGTATCTGTATAGGGTGTTCTGCAGGCTGCGCCCAGGGATCTCGATC				9qA5.3	PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 (Ddx10), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]		
Mus musculus	Riken	ILMN_202501	ILMN_202501	2810429O05RIK	ri|2810429O05|ZX00046D06|AK013198|1551					AK013198	2810429O05Rik		ILMN_1251280	003890047	S	1389	TCCGGCAGTTCACAGCCACCTATAACTCCAACTCCAGAGGACCCAATGCC										
Mus musculus	RefSeq	ILMN_215547	ILMN_215547	SEPN1	NM_029100.2	NM_029100.2		74777	111118963	NM_029100.2	Sepn1	NP_083376.2	ILMN_2660862	006550603	S	3299	GCAGTCCTATGGGAAGTACTGATTGCTGGGGCTTTCTGGGTCTTCATCAG	4	-	134093903-134093952	4qD3	Mus musculus selenoprotein N, 1 (Sepn1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI414492; 1110019I12Rik	AI414492; 1110019I12Rik
Mus musculus	MEEBO	ILMN_195662	ILMN_195662	SCL0002976.1_36	scl0002976.1_36	AK048410.1			26339313	AK048410.1	scl0002976.1_36		ILMN_1251963	004590242	S	20	TGCCTTATTCTATAGGATTTTTGTCCTCTAAGATTCTACCTGGGATTTTC										
Mus musculus	RefSeq	ILMN_213465	ILMN_213465	CASP2	NM_007610.1	NM_007610.1		12366	6680847	NM_007610.1	Casp2	NP_031636.1	ILMN_2637266	006060025	S	3399	TAGAATCTTCACACTTCCCACTGCCAAGATTTTGTATTGCCATCAGGTGC	6	+	42232431-42232480	6qB2.1	Mus musculus caspase 2 (Casp2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence RCA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence RCA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	ICH-1; Nedd2; Caspase-2	ICH-1; Nedd2; Caspase-2
Mus musculus	RefSeq	ILMN_200065	ILMN_200065	LOC385674	XM_358903.1	XM_358903.1			38080190	XM_358903.1	LOC385674		ILMN_1252783	004150035	S	829	GAAGGAAACACCGGAAGTGGCCTCAACATTCGGCTTCCCAACTGGCTCCG										
Mus musculus	MEEBO	ILMN_224273	ILMN_224273	KRT1-2	scl39576.8.1_163				6754485	NM_010665	Krt1-2		ILMN_1249392	002940519	S	1367	GCTTAGTTGGCCCTGACCAGAACCAGGAAGTGGACACTAGCAACATGTCC										
Mus musculus	RefSeq	ILMN_213421	ILMN_213421	MATK	NM_010768.1	NM_010768.1		17179	6754645	NM_010768.1	Matk	NP_034898.1	ILMN_1249525	001660079	S	103	AAGGCGAAGCTCCCGGGTCTCCTGGCTGGCCTTTGAAGGCTGGGAATCTA	10	+	80720986-80721035	10qC1	Mus musculus megakaryocyte-associated tyrosine kinase (Matk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	CHK; Ntk; MGC130505; HYL	CHK; Ntk; MGC130505; HYL
Mus musculus	RefSeq	ILMN_213421	ILMN_213421	MATK	NM_010768.1	NM_010768.1		17179	6754645	NM_010768.1	Matk	NP_034898.1	ILMN_2811421	003440397	S	1296	CCAGCAAGTCGGATGTCTGGAGTTTTGGGGTGCTGTTGTGGGAAGTCTTC	10	+	80725200-80725249	10qC1	Mus musculus megakaryocyte-associated tyrosine kinase (Matk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	CHK; Ntk; MGC130505; HYL	CHK; Ntk; MGC130505; HYL
Mus musculus	RefSeq	ILMN_213421	ILMN_213421	MATK	NM_010768.1	NM_010768.1		17179	6754645	NM_010768.1	Matk	NP_034898.1	ILMN_2743902	001940646	S	1602	GCCAGGACCCCTGATCCCTGAAGCAGAAAGCAAGAGGACATAGATGCAGG	10	+	80725594-80725607:80725608-80725643	10qC1	Mus musculus megakaryocyte-associated tyrosine kinase (Matk), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]	CHK; Ntk; MGC130505; HYL	CHK; Ntk; MGC130505; HYL
Mus musculus	MEEBO	ILMN_219567	ILMN_219567	4931417G12RIK	scl28538.3.1_0				51717001	XM_485816	4931417G12Rik		ILMN_2710573	002690347	S	681	GCTGTATGCGACTTACAAGAAGTGCACCTTCGCCTTGCAGCACTCCAAGT										
Mus musculus	RefSeq	ILMN_220293	ILMN_220293	LMNB1	NM_010721.1	NM_010721.1		16906	6754555	NM_010721.1	Lmnb1	NP_034851.1	ILMN_2916035	000840673	S	2583	ATCTAGTCACCCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTG	18	+	56912878-56912927	18qD3	Mus musculus lamin B1 (Lmnb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	RefSeq	ILMN_220293	ILMN_220293	LMNB1	NM_010721.1	NM_010721.1		16906	6754555	NM_010721.1	Lmnb1	NP_034851.1	ILMN_2720229	006380619	S	1801	GGAAGAACCAGAACTCTTGGGGTACTGGTGAAGATGTGAAGGTTATATTG	18	+	56907697-56907746	18qD3	Mus musculus lamin B1 (Lmnb1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191305	ILMN_191305	IL18BP	scl00098.1_23				6754313	NM_010531	Il18bp		ILMN_2477962	006330601	S	10	GGGCCAGGCAGCTATCCTGGCTGAGCCTTAGAGCTCCAAGAAGCTATTCG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Mus musculus	RefSeq	ILMN_211942	ILMN_211942	SVS4	NM_009300.2	NM_009300.2		20941	142354034	NM_009300.2	Svs4	NP_033326.1	ILMN_2620984	006770343	S	474	CCTGGATGGCATTTACTTCCCATGCTTGTTTGTCTTGAGGTTCTTAAACC	2	-	164101743-164101792	2qH3	Mus musculus seminal vesicle secretory protein 4 (Svs4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			Svp4; SVS-IV; Svp-2; Svp-4; Svp2	Svp4; SVS-IV; Svp-2; Svp-4; Svp2
Mus musculus	RefSeq	ILMN_216458	ILMN_223324	MIER2	NM_027422.2	NM_027422.2		70427	56785425	NM_027422.2	Mier2	NP_081698.2	ILMN_2671319	006020296	S	286	CTGTATGGGTACGAGTCGTCAGACCCCATCTCTGAGCAGGAGAGTGAAGG	10	-	79011971-79012020	10qC1	Mus musculus mesoderm induction early response 1, family member 2 (Mier2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	2700087H15Rik; mKIAA1193	2700087H15Rik; mKIAA1193
Mus musculus	RefSeq	ILMN_197475	ILMN_197475	LOC241864	XM_143053.4	XM_143053.4			38076165	XM_143053.4	LOC241864		ILMN_2528259	003520014	S	744	CTGGACAAGGACAGCGGCTTTGGTTACTCGTGGCACCAGCATGAGGGGCC										
Mus musculus	RefSeq	ILMN_190594	ILMN_215871	DAD1	NM_010015.3	NM_010015.3		13135	142351016	NM_010015.3	Dad1	NP_034145.1	ILMN_2471534	000360470	S	62	ATGACGGACACCACAGACGCCGACATGACGAACACGGGGACTTCGGATAC	14	-	54873442-54873491	14qC2	Mus musculus defender against cell death 1 (Dad1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [evidence IEA]	AI323713	AI323713
Mus musculus	Riken	ILMN_203755	ILMN_203755	CD84	ri|A130013D22|PX00121I04|AK037385|3377					AK037385	Cd84		ILMN_1245754	004150164	S	3143	GAGTCTGGACAAATGTGCTATAAACTCTAAGAGACCCCAGAGGTCATCCC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	Riken	ILMN_202930	ILMN_202930	WARS2	ri|9230106D05|PX00061P23|AK033774|1841					AK033774	Wars2		ILMN_1254344	002030202	S	1769	TGAAGGAGAGCGGTGACAACCCAAAGCTCTAGCACAGCGGCAGGAACCTC						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IDA]; The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6436] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophanyl-tRNA(Trp) [goid 4830] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217746	ILMN_217746	RFFL	NM_026097.2	NM_026097.2		67338	145207977	NM_026097.2	Rffl	NP_080373.1	ILMN_1226372	003610491	S	1577	CGTGGACCAGTCTCTCCTGTCCTAAGATCCATTTCATACATCTGTACACC				11qC	Mus musculus ring finger and FYVE like domain containing protein (Rffl), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BG080975; MGC144763; 4930516L10Rik; 1700051E09Rik	BG080975; MGC144763; 4930516L10Rik; 1700051E09Rik
Mus musculus	RefSeq	ILMN_217746	ILMN_217746	RFFL	NM_026097.2	NM_026097.2		67338	145207977	NM_026097.2	Rffl	NP_080373.1	ILMN_2687071	005670674	S	1411	GCAACTGGCAGTGTTCTTAAGACTAGGACAAGCAGAGTTGCCTGGCATGC				11qC	Mus musculus ring finger and FYVE like domain containing protein (Rffl), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BG080975; MGC144763; 4930516L10Rik; 1700051E09Rik	BG080975; MGC144763; 4930516L10Rik; 1700051E09Rik
Mus musculus	RefSeq	ILMN_228552	ILMN_228552	BB287469	NM_001033788.1	NM_001033788.1		544881	85702104	NM_001033788.1	BB287469	NP_001028960.1	ILMN_2798167	006510079	S	1156	ACTTAGGGCACAGCAGTGTACACTGTTAAGGGACTGCCTTTCCATTTGTG	12	+	88511363-88511412	12qD2	Mus musculus expressed sequence BB287469 (BB287469), mRNA.					
Mus musculus	MEEBO	ILMN_215537	ILMN_215537	SPNB1	scl0020741.1_267				24475587	NM_013675	Spnb1		ILMN_2660754	002690288	S	8010	TGCACCTGAGCCACCTCCATCTGACACTTGAATATCACTGGGTTGGGAGG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]		
Mus musculus	MEEBO	ILMN_195321	ILMN_195321	MSL31	scl53570.13_471				11545734	NM_010832	Msl31		ILMN_1242990	005810450	S	20	CAGGTTGGTGGGAACTGATTGGAACGGCCTTCACGTTCTTGGTAGGTGTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213147	ILMN_213147	CLDN3	NM_009902.3	NM_009902.3		12739	141802289	NM_009902.3	Cldn3	NP_034032.1	ILMN_2634167	004560228	S	1095	CTGTCCAAGCCGAATGGACAAAGAAACCTCGCCCTTCCCAAGAACTGGGC	5	+	135463178-135463227	5qG2	Mus musculus claudin 3 (Cldn3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]	AI182374; mRVP1; Cpetr2	AI182374; mRVP1; Cpetr2
Mus musculus	MEEBO	ILMN_210191	ILMN_210191	4930511N19RIK	scl068181.1_146	NM_183269.1			34304057	NM_183269.1	4930511N19Rik		ILMN_2603136	004760397	S	362	GTACTAAATTGTGATGAATTTTGATACTGACTTGCAGTTGTAATAAAGTA										
Mus musculus	RefSeq	ILMN_220843	ILMN_220843	CDON	NM_021339.1	NM_021339.1		57810	10946653	NM_021339.1	Cdon	NP_067314.1	ILMN_2727643	002570204	S	3537	CCTACCCAGCATACTTGCTGCCAGGACAACATAAGTGACATCAATTCTGA	9	+	35310923-35310972	9qA4	Mus musculus cell adhesion molecule-related/down-regulated by oncogenes (Cdon), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISO]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence TAS]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence ISO]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; The process by which the anatomical structures of the embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 10172] [evidence IMP]; The process by which the anatomical structures of the embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 10172] [evidence IGI]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45663] [evidence TAS]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IGI]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IMP]; Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	CDO; Orcam; Cd0; MGC129383	CDO; Orcam; Cd0; MGC129383
Mus musculus	MEEBO	ILMN_188994	ILMN_188994	A830080H07RIK	scl37344.1.417_0						A830080H07Rik		ILMN_2457437	002470746	S	10	GCCAAAGGGTGCTCTGAGTTTTGGGACGGTCACATGACACAATCCAGCAC										
Mus musculus	RefSeq	ILMN_212867	ILMN_322164	LOC100038882	XM_001471686.1	XM_001471686.1		100038882	149253304	XM_001471686.1	LOC100038882	XP_001471736.1	ILMN_1256257	000460221	S	235	TGCAGTGCTCCAGGACGGTCTTACCCTTTCCAGTCTGGGTCTGGGTCCCA	4	-	155573982-155574031	4qE2	PREDICTED: Mus musculus hypothetical protein LOC100038882 (LOC100038882), mRNA.					
Mus musculus	RefSeq	ILMN_215818	ILMN_215818	PRMT3	NM_133740.1	NM_133740.1		71974	29789322	NM_133740.1	Prmt3	NP_598501.1	ILMN_2948712	001990152	S	2311	GTAGCCTATGTGTGACAGACTGCTCTCCAGGATGGGGTAGATGTTGCCTC	7	+	49726102-49726151	7qB5	Mus musculus protein arginine N-methyltransferase 3 (Prmt3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	2010005E20Rik; AL033309; Hrmt1l3; 2410018A17Rik	2010005E20Rik; AL033309; Hrmt1l3; 2410018A17Rik
Mus musculus	RefSeq	ILMN_247038	ILMN_247038	RASL10B	NM_001013386.1	NM_001013386.1		276952	83523749	NM_001013386.1	Rasl10b	NP_001013404.1	ILMN_2900980	006130463	S	3209	ATCACCCCCTTACTCTGGGGCACTCCAGGAGAGGGTGGAGGATCCAGACC	11	+	83234268-83234317	11qC	Mus musculus RAS-like, family 10, member B (Rasl10b), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Gm729; VTS58635; B230331P10Rik	Gm729; VTS58635; B230331P10Rik
Mus musculus	RefSeq	ILMN_219219	ILMN_219219	4932411E22RIK	NM_172534.2	NM_172534.2		214604	141803578	NM_172534.2	4932411E22Rik	NP_766122.1	ILMN_1230821	004890427	S	2544	CCCATTCAGTCCACGGCCATTCTCAATGTTCTTTTTCTGCATAGCAGGCC	11	-	89251608-89251657	11qC	Mus musculus RIKEN cDNA 4932411E22 gene (4932411E22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_198882	ILMN_230608	FREM3	XM_984073.1	XM_984073.1		333315	94383693	XM_984073.1	Frem3	XP_989167.1	ILMN_1233552	001580563	S	6265	GAGTGACAATCCTTGATGACCTGCCACAGCCTGCCTTTGAGGGTCCAGAG	8	+	83219095-83219144	8qC2	PREDICTED: Mus musculus Fras1 related extracellular matrix protein 3 (Frem3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200006	ILMN_200006	LOC381634	XM_355598.1	XM_355598.1			38079749	XM_355598.1	LOC381634		ILMN_1213120	001070437	S	707	ACGCCAGCACTTGCTCAATGGCAGGGTATGACAGCCCAACTGGTCGCCAT										
Mus musculus	RefSeq	ILMN_201234	ILMN_201234	LOC384963	XM_357964.1	XM_357964.1			38090025	XM_357964.1	LOC384963		ILMN_1227850	007150202	S	161	GGCTGGGCCTGATGGGAAATGTGGGAGTCGTTGGTAACACACATCCTGAC										
Mus musculus	Riken	ILMN_205761	ILMN_205761	C130032L16RIK	ri|C130032L16|PX00168H03|AK048064|2678					AK048064	C130032L16Rik		ILMN_1228180	002030056	S	2408	AGACATCCACGCCACATAATGGCCTTTTCACAGCAGCCAACAGTAGCCCC										
Mus musculus	Riken	ILMN_203208	ILMN_203208	B230214I19RIK	ri|B230214I19|PX00069F02|AK045601|2032					AK045601	B230214I19Rik		ILMN_2555538	001850445	S	1797	TCCTAGCACTCAGGGTCCTGACGGGCATGAGGGTTACCATGTGTTTGAGG										
Mus musculus	RefSeq	ILMN_193338	ILMN_225515	TMEM33	NM_028975.3	NM_028975.3		67878	68533247	NM_028975.3	Tmem33	NP_083251.2	ILMN_1258977	004540070	S	877	CTCCAGAGCATCGCCTTTATCAGCAGACTGGCACCAACAGTTGCGTAGTT	5	+	67677417-67677464:67677465-67677466	5qC3.1	Mus musculus transmembrane protein 33 (Tmem33), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AA388285; db83; 2700052H22Rik; 1600019D15Rik; AI426615; 1110006G02Rik; AI314185; 5430406L04Rik; 2410089A21Rik	AA388285; db83; 2700052H22Rik; 1600019D15Rik; AI426615; 1110006G02Rik; AI314185; 5430406L04Rik; 2410089A21Rik
Mus musculus	RefSeq	ILMN_197699	ILMN_197699	LOC380984	XM_358480.1	XM_358480.1			38077455	XM_358480.1	LOC380984		ILMN_2529053	003400075	S	551	GCCTAACTACTGCACTCTTCCCATACAAGTGGCTTCCCATACACAGAGGC										
Mus musculus	Riken	ILMN_206059	ILMN_206059	NNT	ri|D230040N16|PX00190F01|AK052061|2293					AK052061	Nnt		ILMN_2577247	006220035	S	1055	GCGCTGTTAACCTCTGAGCCATCTCTCCAGCCCCACTTTCAGTGTTTCTT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+ [goid 8746] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD+ and B-specific (i.e. the pro-S hydrogen is transferred) with respect to NADP+ [goid 8750] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192752	ILMN_192752	A830054O07RIK	scl15998.1_377						A830054O07Rik		ILMN_2490981	003400544	S	11	GCCTGGGGGATCTTTTCTTGATTGTGCAAGTGCTCCAGTCTGATAGTGTG										
Mus musculus	RefSeq	ILMN_218121	ILMN_218121	LYRM5	NM_133688.2	NM_133688.2		67636	114205385	NM_133688.2	Lyrm5	NP_598449.1	ILMN_2822141	002600097	S	1016	TTTCTGTCGACCTGTAACCGAGTCCATGTGGCAGTGGACCTAACCCAGGC	6	+	145164642-145164691	6qG3	Mus musculus LYR motif containing 5 (Lyrm5), mRNA.				AL022899; Ghiso; 4930469P12Rik	AL022899; Ghiso; 4930469P12Rik
Mus musculus	RefSeq	ILMN_200786	ILMN_242652	RHOX1	NM_001025084.2	NM_001025084.2		385343	115311557	NM_001025084.2	Rhox1	NP_001020255.2	ILMN_1215990	005960301	S	384	CATGGTTCCCTGTACCCGAGAAGGCCATGACTGGGAGAATGCACAGCAGC	X	-	34757807-34757856	XqA3.3	Mus musculus reproductive homeobox 1 (Rhox1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_242652	ILMN_242652	RHOX1	NM_001025084.2	NM_001025084.2		385343	115311557	NM_001025084.2	Rhox1	NP_001020255.2	ILMN_3139567	004590767	A	392	CCTGTACCCGAGAAGGCCATGACTGGGAGAATGCACAGCAGCTTCAGCAG	X	-	34757799-34757848	XqA3.3	Mus musculus reproductive homeobox 1 (Rhox1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_199533	ILMN_199533	LOC382691	XM_356627.1	XM_356627.1			38074020	XM_356627.1	LOC382691		ILMN_2535566	005960465	S	11	AGATCTCCGTGTCGGAATTCGTGGCCGAGACCCTTGAGGACTACATGGCG										
Mus musculus	RefSeq	ILMN_196909	ILMN_246204	ALS2CR4	NM_001037812.2	NM_001037812.2		381259	141801956	NM_001037812.2	Als2cr4	NP_001032901.1	ILMN_1233713	007100215	S	1110	GCTGAGGAACCGATTCTCGTGCCATGGATCATAGTGAATCTGGTGGTGGC	1	-	59162451-59162500	1qC1.3	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4 (Als2cr4), transcript variant 2, mRNA. XM_909142 XM_921139 XM_921149 XM_921172 XM_921181	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Gm972; AI853305	Gm972; AI853305
Mus musculus	RefSeq	ILMN_196936	ILMN_310031	LOC100040766	XM_001475729.1	XM_001475729.1		100040766	149234211	XM_001475729.1	LOC100040766	XP_001475779.1	ILMN_1216395	003360300	S	4849	GGCCACCATGTTTCAGTGTGTGCATTTCTGGGGCTGGAAGTCCCTGGAGA	1	+	90155166-90155215	1qD	PREDICTED: Mus musculus similar to hCG2012694 (LOC100040766), mRNA.					
Mus musculus	RefSeq	ILMN_190421	ILMN_242374	LMBRD1	NM_026719.2	NM_026719.2		68421	123701961	NM_026719.2	Lmbrd1	NP_080995.2	ILMN_2725647	007400379	S	4102	CTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTCGTAGAA	1	+	24821856-24821905	1qA5	Mus musculus LMBR1 domain containing 1 (Lmbrd1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			0910001K20Rik; AV347960	0910001K20Rik; AV347960
Mus musculus	RefSeq	ILMN_196454	ILMN_196454	AI464131	XM_283952.2	XM_283952.2			38078335	XM_283952.2	AI464131		ILMN_2524272	002060349	S	2043	CGGCAAATGGCGAAGCTACAAGGGTGAACTTTTTGACAAGACGCCGGTGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]		
Mus musculus	MEEBO	ILMN_221156	ILMN_221156	2610021I23RIK	scl070413.1_245				51764964	XM_486234	2610021I23Rik		ILMN_2731666	003870017	S	1512	CCTGTTTGTAAGCTGCTTTAACAAAAATATATGTTGTATTAATGTAATTA										
Mus musculus	RefSeq	ILMN_217975	ILMN_217975	EFNA4	NM_007910.2	NM_007910.2		13639	110835738	NM_007910.2	Efna4	NP_031936.2	ILMN_2691352	005720075	S	693	TCTGTGAGCCAAGCACACCTTCCAAGTCACCCCAAGGAACCGCAGCCCTT	3	-	89138168-89138211:89138212-89138217	3qF1	Mus musculus ephrin A4 (Efna4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			EFL-4; Epl4; LERK-4	EFL-4; Epl4; LERK-4
Mus musculus	RefSeq	ILMN_217975	ILMN_217975	EFNA4	NM_007910.2	NM_007910.2		13639	110835738	NM_007910.2	Efna4	NP_031936.2	ILMN_1217493	000770070	S	567	TGAGTCAGCTCATCCTGTTGGGAGTCCTGGAGAAAGCGGTACGTCCGGGT	3	-	89138294-89138343	3qF1	Mus musculus ephrin A4 (Efna4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			EFL-4; Epl4; LERK-4	EFL-4; Epl4; LERK-4
Mus musculus	Riken	ILMN_202290	ILMN_202290	4932434L04RIK	ri|4932434L04|PX00018L20|AK016549|2622					AK016549	4932434L04Rik		ILMN_1227304	003830747	S	2317	CTCAAGTAGCTTGTGTGTGCACGTGTGAGGGGACAAAGGTCAGCCTCGGG										
Mus musculus	RefSeq	ILMN_211529	ILMN_211529	NISCH	NM_022656.2	NM_022656.2		64652	114158671	NM_022656.2	Nisch	NP_073147.2	ILMN_2616709	006760706	S	5498	CCAGTACAGGGGACCTAGAGCTGCCAGCACCAAGTATAATTCCTGTTGCC	14	-	31984152-31984201	14qB	Mus musculus nischarin (Nisch), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IDA]	1200007D05Rik; 3202002H23Rik; AW494485; I-1	1200007D05Rik; 3202002H23Rik; AW494485; I-1
Mus musculus	RefSeq	ILMN_213910	ILMN_213910	SIT1	NM_019436.2	NM_019436.2		54390	141802022	NM_019436.2	Sit1	NP_062309.1	ILMN_1258509	000430746	S	569	TGTGTGCCCAGACCCGCAGAGGCCGGGCTTCCTTCCCAGATCAAGCCTAT	4	-	43495513-43495562	4qB1	Mus musculus suppression inducing transmembrane adaptor 1 (Sit1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		Sit	Sit
Mus musculus	RefSeq	ILMN_234631	ILMN_234631	JMJD3	NM_001017426.1	NM_001017426.1		216850	62945393	NM_001017426.1	Jmjd3	NP_001017426.1	ILMN_3095624	004920424	A	5026	TGCAGTCAATGAAGCACTGTCAGGTACAGCGGGAGAGCCTGGTGCGGGCA	11	-	69213763-69213812	11qB3	Mus musculus jumonji domain containing 3 (Jmjd3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The modification of histones by removal of methyl groups [goid 16577] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	mKIAA0346; 1700064E03Rik; RP23-5O23.5; BC038313; KIAA0346	mKIAA0346; 1700064E03Rik; RP23-5O23.5; BC038313; KIAA0346
Mus musculus	RefSeq	ILMN_234631	ILMN_234631	JMJD3	NM_001017426.1	NM_001017426.1		216850	62945393	NM_001017426.1	Jmjd3	NP_001017426.1	ILMN_3023230	004880253	I	6561	CCCAGGGGCAGAGGGGGGCTTCCCATTCCTACCCTATTTTCGGTGATTTT	11	-	69212053-69212102	11qB3	Mus musculus jumonji domain containing 3 (Jmjd3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]; The modification of histones by removal of methyl groups [goid 16577] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	mKIAA0346; 1700064E03Rik; RP23-5O23.5; BC038313; KIAA0346	mKIAA0346; 1700064E03Rik; RP23-5O23.5; BC038313; KIAA0346
Mus musculus	RefSeq	ILMN_211879	ILMN_211879	ALKBH2	NM_175016.2	NM_175016.2		231642	61098161	NM_175016.2	Alkbh2	NP_778181.2	ILMN_2620365	002760390	S	851	ATTTTCCGGCACAAAGACTCTCGAGGGAAGAGGCCCCGGAGGACAGTGGA	5	-	114574107-114574156	5qF	Mus musculus alkB, alkylation repair homolog 2 (E. coli) (Alkbh2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Hydroxylase, with 2-oxoglutarate as one donor, and incorporation or reduction of one atom each of oxygen into both donors [goid 10302] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IDA]; Catalysis of the reaction: methyl-dCpdG DNA + H2O = dCpdG DNA + methanol. This reaction is the hydrolytic removal of the methyl group on the 5 position of cytosine in DNA [goid 51747] [evidence IDA]	Abh2; AU016977; mABH2; 9530023G02	Abh2; AU016977; mABH2; 9530023G02
Mus musculus	RefSeq	ILMN_214077	ILMN_214077	GFRAL	NM_205844.3	NM_205844.3		404194	112821668	NM_205844.3	Gfral	NP_995316.2	ILMN_2644000	005340632	S	1949	AAGCAGCTACATTGGTTGAGAAAAGTCAATGGTTACTCCAGTAATGATAT	9	-	76011990-76012039	9qD	Mus musculus GDNF family receptor alpha like (Gfral), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IDA]; A series of molecular signals in which a stress-activated protein kinase (SAPK) cascade relays one or more of the signals [goid 31098] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AY457637; Gral	AY457637; Gral
Mus musculus	Riken	ILMN_206419	ILMN_206419	C230035G09RIK	ri|C230035G09|PX00174J15|AK082301|3878					AK082301	C230035G09Rik		ILMN_2579934	004390181	S	3422	GATGGTCTATCCACCTCATGACCTTAGCCACTGACCCTCATACCACAGTG										
Mus musculus	RefSeq	ILMN_221950	ILMN_235209	LOC637711	XM_913466.2	XM_913466.2		637711	94375320	XM_913466.2	LOC637711	XP_918559.1	ILMN_1239601	000160239	S	649	CTGCAGATCCTGCTCACCAACACCAAGGTCCCGCGGAGTACCAAGGCCCT					PREDICTED: Mus musculus similar to mevalonate kinase (LOC637711), mRNA.					
Mus musculus	RefSeq	ILMN_212978	ILMN_212978	D2ERTD391E	NM_145528.2	NM_145528.2		51897	118130154	NM_145528.2	D2Ertd391e	NP_663503.1	ILMN_2632230	005130095	S	3289	GCAGGGCTCAGCCAGTGGCCTTTGCAGACAGCAGCCTTTATGTCCTAGAT	2	-	91514987-91515036	2qE1	Mus musculus DNA segment, Chr 2, ERATO Doi 391, expressed (D2Ertd391e), mRNA.				1110053A20Rik; RP23-12H6.2	1110053A20Rik; RP23-12H6.2
Mus musculus	MEEBO	ILMN_213880	ILMN_213880	1810009K13RIK	scl066275.3_306	NM_025462.1			13384873	NM_025462.1	1810009K13Rik		ILMN_2641751	003450039	S	1050	CTTTAGGGGCAAAGCTCAACACATGCTCCTCTGCTCATCCAACCTGCATT										
Mus musculus	RefSeq	ILMN_261872	ILMN_261872	OLFR834	NM_001011823.1	NM_001011823.1		258074	58801409	NM_001011823.1	Olfr834	NP_001011823.1	ILMN_3162757	005900441	I	816	TATAGCCTCTGTGATGTACACAGTGGTCACTCCCATGATGAATCCCTTTA	9	+	18793249-18793298	9qA2	Mus musculus olfactory receptor 834 (Olfr834), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR153-4_p; MOR153-2	MOR153-4_p; MOR153-2
Mus musculus	RefSeq	ILMN_220308	ILMN_220308	GGTA1	NM_010283.1	NM_010283.1		14594	6753981	NM_010283.1	Ggta1	NP_034413.1	ILMN_2784019	004250066	S	3172	GGTCGCACACCCAGAGGCAACAAAACCCACAGAATTCCTGAACCAATGGG	2	-	35222455-35222504	2qB	Mus musculus glycoprotein galactosyltransferase alpha 1, 3 (Ggta1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: beta-D-galactosyl-(1,4)-beta-N-acetyl-D-glucosaminyl-R + UDP-galactose = alpha-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-N-acetyl-D-glucosaminyl-R + UDP [goid 47276] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]	alpha3GalT; Gal; AW108479; GALT; Ggta; Ggta-1	alpha3GalT; Gal; AW108479; GALT; Ggta; Ggta-1
Mus musculus	RefSeq	ILMN_256963	ILMN_256963	OLFR1329	NM_001011870.1	NM_001011870.1		258214	58801501	NM_001011870.1	Olfr1329	NP_001011870.1	ILMN_2924324	005570605	S	889	GACATCAAGAGGGCATTTCTCAAGGTGATGGGACATGCTAGGGTAGATTC	4	-	118589132-118589181	4qD2.1	Mus musculus olfactory receptor 1329 (Olfr1329), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR259-2	MOR259-2
Mus musculus	RefSeq	ILMN_200171	ILMN_200171	LOC381671	XM_355641.1	XM_355641.1			38080776	XM_355641.1	LOC381671		ILMN_1233504	004210692	S	2767	CCATGGGTTCAGGATTCCTATGCAGCCACAGTCAACGCAGTGTGCCCCGA										
Mus musculus	RefSeq	ILMN_199217	ILMN_252306	GM884	NM_001033434.1	NM_001033434.1		380730	85701938	NM_001033434.1	Gm884	NP_001028606.1	ILMN_2534459	002850048	S	4402	ACTCAAACTCGACAAGAAATGTGGGCATGATTTACGGGCCAATACTCAGG	11	-	103396093-103396142	11qE1	Mus musculus gene model 884, (NCBI) (Gm884), mRNA.					
Mus musculus	RefSeq	ILMN_252306	ILMN_252306	GM884	NM_001033434.1	NM_001033434.1		380730	85701938	NM_001033434.1	Gm884	NP_001028606.1	ILMN_2838901	004220204	S	4126	CGAAAATACAGAAACCCAAAGCAAACTGAAGAGTCTGGGACGAAGTCAGT	11	-	103402253-103402254:103403081-103403128	11qE1	Mus musculus gene model 884, (NCBI) (Gm884), mRNA.					
Mus musculus	MEEBO	ILMN_214168	ILMN_214168	FANCD2	scl29628.36_98	XM_132796.4			38084985	XM_132796.4	Fancd2		ILMN_1240163	006420347	S	4830	GTTGAGGTTTGTGCAATCGTACTGGTGGCCTAAAAGTATGTTCCGTACTG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IMP]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IMP]			
Mus musculus	Riken	ILMN_205520	ILMN_205520	D130055G19RIK	ri|D130055G19|PX00184L19|AK051541|2506					AK051541	D130055G19Rik		ILMN_1223637	006510239	S	1991	CCCAGTAATGTGAGGAAGTTGACCCAGGATCTGTGGGTGGTTGGGGTCTG										
Mus musculus	RefSeq	ILMN_211926	ILMN_211926	BRCC3	NM_145956.2	NM_145956.2		210766	31542276	NM_145956.2	Brcc3	NP_666068.1	ILMN_1222806	007560523	S	628	GCCTTGAATCTGCAGTAGAGCTGCCAAAAATCCTGTGTCAGGAAGAACAG	X	+	72669425-72669465:72680804-72680812	XqA7.3	Mus musculus BRCA1/BRCA2-containing complex, subunit 3 (Brcc3), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence ISO]	Modulates the activity of an enzyme [goid 30234] [evidence ISO]	C6.1A; MGC29148	C6.1A; MGC29148
Mus musculus	RefSeq	ILMN_218784	ILMN_218784	4930506M07RIK	NM_175172.2	NM_175172.2		71653	31340916	NM_175172.2	4930506M07Rik	NP_780381.1	ILMN_2944657	004260181	S	3434	CCTATTGTATTTTTGCACGTGTGCTACTAGCGTGGGCCTGGGGAGGTGGG	19	-	59026891-59026940	19qD3	Mus musculus RIKEN cDNA 4930506M07 gene (4930506M07Rik), mRNA.	A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence ISA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	shootin1; KIAA1598; mKIAA1598	shootin1; KIAA1598; mKIAA1598
Mus musculus	RefSeq	ILMN_218445	ILMN_218445	2010015L04RIK	NM_177674.4	NM_177674.4		544678	142354426	NM_177674.4	2010015L04Rik	NP_808342.2	ILMN_3162434	006420730	S	2715	TCCCCAGGAATGGGTAAAGAAGCAATCTCAGGGGCTGGAGAGGTGGCTCG	4	+	154816983-154817032	4qE2	Mus musculus RIKEN cDNA 2010015L04 gene (2010015L04Rik), mRNA.				KIAA1751; A530045M11	KIAA1751; A530045M11
Mus musculus	RefSeq	ILMN_189442	ILMN_256225	CXCL16	NM_023158.6	NM_023158.6		66102	141802996	NM_023158.6	Cxcl16	NP_075647.3	ILMN_2687586	000630274	S	1313	GATGATGACATGGGAGAGGTGGTAGGGCAGCAGGCTCGTCTCCATCAGTG	11	-	70272953-70273002	11qB3	Mus musculus chemokine (C-X-C motif) ligand 16 (Cxcl16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IDA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IDA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IDA]	0910001K24Rik; SR-PSOX; Zmynd15; AV290116; BB024863	0910001K24Rik; SR-PSOX; Zmynd15; AV290116; BB024863
Mus musculus	RefSeq	ILMN_189442	ILMN_256225	CXCL16	NM_023158.6	NM_023158.6		66102	141802996	NM_023158.6	Cxcl16	NP_075647.3	ILMN_1254723	006250112	S	2254	GCCCTTAGCCTTCCCCCACGTCTAATAAAATGTAACACTCAAATACGTGG	11	-	70270715-70270764	11qB3	Mus musculus chemokine (C-X-C motif) ligand 16 (Cxcl16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IDA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IDA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IDA]	0910001K24Rik; SR-PSOX; Zmynd15; AV290116; BB024863	0910001K24Rik; SR-PSOX; Zmynd15; AV290116; BB024863
Mus musculus	MEEBO	ILMN_209646	ILMN_209646	0610042C05RIK	scl38252.13.42_0	NM_025343.2			34328264	NM_025343.2	0610042C05Rik		ILMN_1258239	001010484	S	1360	CCTAATGCGGAATCACCTCAATGAGAAGCGAGCACTCCGCTTGGAGTGGA										
Mus musculus	RefSeq	ILMN_215437	ILMN_215437	SNAP23	NM_009222.2	NM_009222.2		20619	31543748	NM_009222.2	Snap23	NP_033248.1	ILMN_2834696	005900494	S	1755	GACCGCACTGCCATTCTCTCTGCCTTATGCACAGAATCAAGTTTATGTAG	2	+	120291728-120291777	2qE5	Mus musculus synaptosomal-associated protein 23 (Snap23), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Syndet; 23kDa; Sndt; SNAP-23; AA408749	Syndet; 23kDa; Sndt; SNAP-23; AA408749
Mus musculus	RefSeq	ILMN_200311	ILMN_200311	LOC386198	XM_359115.1	XM_359115.1			38081280	XM_359115.1	LOC386198		ILMN_1250219	002140484	S	719	AATGCTGCCTGCCATCAGCAGAAGTCCTGGTTACCACTCTCAGTGGCAGC										
Mus musculus	RefSeq	ILMN_189511	ILMN_189511	ZFP84	NM_023750.2	NM_023750.2		74352	113865960	NM_023750.2	Zfp84	NP_076239.1	ILMN_2498557	007000195	S	3452	CCAGGTACAGACAGAAAGTTTGACTGCTATAAAATAAGGTATTCTCCAGA	7	+	30564179-30564228	7qB1	Mus musculus zinc finger protein 84 (Zfp84), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AI415447; 2210410P13Rik; BB081605; 4633401C23Rik; KRAB18; Zfp69; C86188	AI415447; 2210410P13Rik; BB081605; 4633401C23Rik; KRAB18; Zfp69; C86188
Mus musculus	RefSeq	ILMN_222466	ILMN_314540	LOC667519	XR_032130.1	XR_032130.1		667519	149260681	XR_032130.1	LOC667519		ILMN_2749954	000270280	S	811	AGATTTAAAGCTTTTGATGTTGAATGTTTCTAAATATTTAATGGTTTCTT	10	-	25552642-25552691	10qA4	PREDICTED: Mus musculus similar to high mobility group protein B2 (LOC667519), misc RNA.					
Mus musculus	RefSeq	ILMN_220364	ILMN_220364	OLFR1122	NM_147031.1	NM_147031.1		259033	22128886	NM_147031.1	Olfr1122	NP_667242.1	ILMN_1241550	005960309	S	644	CAGTAGTGTTTATCATGGTCCCATTTCTGTTAATCCTTGTCTCCTATGGC	2	+	87228507-87228556	2qD	Mus musculus olfactory receptor 1122 (Olfr1122), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR264-1	MOR264-1
Mus musculus	MEEBO	ILMN_192987	ILMN_192987	BAI3	scl16911.32.1_67				28866951	NM_175642	Bai3		ILMN_2752639	005310068	S	4502	CGAGTGGGAGAAGTGTCTGAATTTGCCTCTGGATGTGCAAGAGGGTGACT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 16527] [evidence TAS]		
Mus musculus	RefSeq	ILMN_211877	ILMN_211877	METAPL1	NM_025633.3	NM_025633.3		66559	146135056	NM_025633.3	Metapl1	NP_079909.1	ILMN_1253142	001450075	S	989	GGGGAGTGGAGATACTGACCAAACTGCCACAAGAAGCCTGAGAATCGGCC				2qC2	Mus musculus methionine aminopeptidase-like 1 (Metapl1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]	2310066F24Rik; AV117938; 3110033D18Rik	2310066F24Rik; AV117938; 3110033D18Rik
Mus musculus	RefSeq	ILMN_245470	ILMN_245470	BC065397	NM_001033001.1	NM_001033001.1		436230	85701589	NM_001033001.1	BC065397	NP_001028173.1	ILMN_2869658	004850598	S	416	CGCGCGTGAGCGTAGGCGAGGTCCCTCATTTTGGTGGATTTTTCTGCCTT	X	+	132088561-132088610	XqF1	Mus musculus cDNA sequence BC065397 (BC065397), mRNA.				parl7	parl7
Mus musculus	RefSeq	ILMN_245470	ILMN_245470	BC065397	NM_001033001.1	NM_001033001.1		436230	85701589	NM_001033001.1	BC065397	NP_001028173.1	ILMN_2869654	004220209	S	989	AATTCCCCAGTGATAGAGACAACTCCAGTTTCCTGTGGGTGGTGAGCCTC	X	+	132089134-132089183	XqF1	Mus musculus cDNA sequence BC065397 (BC065397), mRNA.				parl7	parl7
Mus musculus	RefSeq	ILMN_255517	ILMN_255517	IREB2	NM_022655.2	NM_022655.2		64602	142349648	NM_022655.2	Ireb2	NP_073146.1	ILMN_3161612	003170450	S	2659	GGGCTGCCAAGGGACCCTATTTGCTGGGTGTAAAAGCTGTTTTGGCTGAG	9	+	54754705-54754730:54756549-54756572	9qB	Mus musculus iron responsive element binding protein 2 (Ireb2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; Any process of regulating the production and elimination of erythrocytes within an organism [goid 34101] [evidence IMP]; The chemical reactions and pathways resulting in the formation of protoporphyrinogen IX [goid 6782] [evidence IMP]; Any process by which nutrients are taken up from the contents of the intestine [goid 50892] [evidence IGI]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IDA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IGI]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with the iron-responsive element, a regulatory sequence found in the 5'- and 3'-untranslated regions of mRNAs encoding many iron-binding proteins [goid 30350] [evidence IDA]; Antagonizes ribosome-mediated translation of mRNA into a polypeptide [goid 30371] [evidence TAS]; Interacting selectively with the iron-responsive element, a regulatory sequence found in the 5'- and 3'-untranslated regions of mRNAs encoding many iron-binding proteins [goid 30350] [evidence IDA]	Irp2; DKFZp564D1164; D9Ertd85e	Irp2; DKFZp564D1164; D9Ertd85e
Mus musculus	RefSeq	ILMN_213187	ILMN_255821	TAPT1	NM_173764.3	NM_173764.3		231225	71143115	NM_173764.3	Tapt1	NP_776125.2	ILMN_2771441	003130129	S	3345	GCTGTTCTCTGAAGATTGCATTTCCTTTGCAGATGCTCTTGGGAGTGTGG	5	-	44566495-44566544	5qB3	Mus musculus transmembrane anterior posterior transformation 1 (Tapt1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IMP]		4932414K18Rik	4932414K18Rik
Mus musculus	RefSeq	ILMN_244829	ILMN_244829	PTPDC1	NM_207232.1	NM_207232.1		218232	46402212	NM_207232.1	Ptpdc1	NP_997115.1	ILMN_2805624	001190411	S	3945	GGAAATACGGTGATGGTTAATGAACCGGCTTACCCAGTGCTGAAGTATCC	13	-	48673557-48673606	13qA5	Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	AW456874; AI843923	AW456874; AI843923
Mus musculus	RefSeq	ILMN_209240	ILMN_244829	PTPDC1	NM_207232.1	NM_207232.1		218232	46402212	NM_207232.1	Ptpdc1	NP_997115.1	ILMN_2593927	003360040	S	227	GAATGAAGATCCATATTCCACGTTGGTGAATAGCAGTGGGCATGCTGCAC	13	-	48701650-48701699	13qA5	Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	AW456874; AI843923	AW456874; AI843923
Mus musculus	RefSeq	ILMN_209240	ILMN_244829	PTPDC1	NM_207232.1	NM_207232.1		218232	46402212	NM_207232.1	Ptpdc1	NP_997115.1	ILMN_2701543	001570010	S	4157	GCCTGTGCATTTGCAACATTTGTTTTAAGTTCTGGCACCGTCATGTGCTG	13	-	48673345-48673394	13qA5	Mus musculus protein tyrosine phosphatase domain containing 1 (Ptpdc1), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	AW456874; AI843923	AW456874; AI843923
Mus musculus	RefSeq	ILMN_199213	ILMN_199213	LOC328014	XM_286385.1	XM_286385.1			28514429	XM_286385.1	LOC328014		ILMN_2534445	000160593	S	399	GGTCTCCAAAAAGACACCCAAAGGCAAGGACCCCAGACTAAGCCAACCGG										
Mus musculus	RefSeq	ILMN_198107	ILMN_198107	LOC194612	XM_112104.1	XM_112104.1			20347007	XM_112104.1	LOC194612		ILMN_2530517	002680192	S	2327	GCAGTGTCTGGGTCACTTTCATCCCTGTTTACCACAGCACCAAAGGCAAG										
Mus musculus	RefSeq	ILMN_198328	ILMN_254623	EG240327	NM_001033767.2	NM_001033767.2		240327	142382131	NM_001033767.2	EG240327	NP_001028939.1	ILMN_1254685	002490653	S	1052	GGTGGAAGACTTGGCTGGAAGGCTTTGCAGATGGGCTACTGAGCTTCTTC	18	+	60405881-60405930	18qD3	Mus musculus predicted gene, EG240327 (EG240327), mRNA.					
Mus musculus	RefSeq	ILMN_220599	ILMN_220599	OLFR403	NM_207622.1	NM_207622.1		404316	46518539	NM_207622.1	Olfr403	NP_997505.1	ILMN_2724222	002120519	S	877	CGGGACATGAAGGCTGCTCTGAAGAAACTCTTCCACTGCCACTCTTCCTC	11	+	74009883-74009932	11qB5	Mus musculus olfactory receptor 403 (Olfr403), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	Olfr43; IA7; MOR125-5_p	Olfr43; IA7; MOR125-5_p
Mus musculus	RefSeq	ILMN_216436	ILMN_216436	KCNE3	NM_020574.4	NM_020574.4		57442	142386703	NM_020574.4	Kcne3	NP_065599.1	ILMN_1230320	004860184	S	708	CTCAACCATATCAAGCCACAGTGTATCTATGTAAGATCAACAGGAAACTG	7	+	107333070-107333119	7qE2	Mus musculus potassium voltage-gated channel, Isk-related subfamily, gene 3 (Kcne3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence ISS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MiRP2; 2210017H05Rik	MiRP2; 2210017H05Rik
Mus musculus	RefSeq	ILMN_215186	ILMN_215186	BBS7	NM_027810.2	NM_027810.2		71492	142352247	NM_027810.2	Bbs7	NP_082086.1	ILMN_2656511	005130577	S	2345	GAAGAGTGACGGCCTCTAAGCATCCCCCTACGAGTACCCATGAAAGTCCT	3	-	36491635-36491657:36492593-36492619	3qB	Mus musculus Bardet-Biedl syndrome 7 (Bbs7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 17379567] [evidence IEP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	8430406N16Rik	8430406N16Rik
Mus musculus	RefSeq	ILMN_213348	ILMN_213348	MSH5	NM_013600.1	NM_013600.1		17687	7305280	NM_013600.1	Msh5	NP_038628.1	ILMN_1241923	000270703	S	2682	GATCCCACCCTGGACCTGGACATTTTCATTAGTCAGGAAGTGCTGCCCGC	17	-	35170742-35170753:35171107-35171144	17qB1	Mus musculus mutS homolog 5 (E. coli) (Msh5), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IMP]; Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells [goid 7127] [evidence IMP]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	G7; Mut5	G7; Mut5
Mus musculus	RefSeq	ILMN_213348	ILMN_213348	MSH5	NM_013600.1	NM_013600.1		17687	7305280	NM_013600.1	Msh5	NP_038628.1	ILMN_2992653	004670349	S	2455	ACCTTGTCTTCTTCTACCAGCTTTGCCAAGGCGTCGCCAGTGCCAGCCAC	17	-	35175364-35175413	17qB1	Mus musculus mutS homolog 5 (E. coli) (Msh5), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IMP]; Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells [goid 7127] [evidence IMP]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	G7; Mut5	G7; Mut5
Mus musculus	RefSeq	ILMN_213348	ILMN_213348	MSH5	NM_013600.1	NM_013600.1		17687	7305280	NM_013600.1	Msh5	NP_038628.1	ILMN_2636175	004200577	S	948	AGTGAGTCTCACCCCTCGGTGTACAAAGTAGCCAGTGGGCTGAAGGAGGG	17	-	35183052-35183060:35183176-35183216	17qB1	Mus musculus mutS homolog 5 (E. coli) (Msh5), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IMP]; Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells [goid 7127] [evidence IMP]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	G7; Mut5	G7; Mut5
Mus musculus	RefSeq	ILMN_190402	ILMN_231209	RNASEL	NM_011882.1	NM_011882.1		24014	31982956	NM_011882.1	Rnasel	NP_036012.1	ILMN_1257798	005960093	S	2035	CAGAAGCTTTGACCAGTGGACATCTAAGATCGACAAAAATGTTATGGATG	1	+	155606792-155606806:155607905-155607939	1qG3	Mus musculus ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) (Rnasel), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16891] [evidence IEA]	E230029I04Rik	E230029I04Rik
Mus musculus	RefSeq	ILMN_216759	ILMN_216759	D2ERTD750E	NM_026412.2	NM_026412.2		51944	141801803	NM_026412.2	D2Ertd750e	NP_080688.1	ILMN_2761852	005820193	S	1322	TAGAGACTCGGAAACATGGGAAGAAGGCCCACACCACAACAGCACGAGTG	2	+	118660152-118660201	2qE5	Mus musculus DNA segment, Chr 2, ERATO Doi 750, expressed (D2Ertd750e), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700025D04Rik; C15orf23	1700025D04Rik; C15orf23
Mus musculus	RefSeq	ILMN_216759	ILMN_216759	D2ERTD750E	NM_026412.2	NM_026412.2		51944	141801803	NM_026412.2	D2Ertd750e	NP_080688.1	ILMN_2729309	001240386	S	411	CGAGCTACTTCTAAACTACCTGTTAAATCCAAAGAAGCGGATTTGCTTAG	2	+	118643611-118643660	2qE5	Mus musculus DNA segment, Chr 2, ERATO Doi 750, expressed (D2Ertd750e), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	1700025D04Rik; C15orf23	1700025D04Rik; C15orf23
Mus musculus	RefSeq	ILMN_210687	ILMN_233591	GALNTL1	NM_001081421.1	NM_001081421.1		108760	124487252	NM_001081421.1	Galntl1	NP_001074890.1	ILMN_1237583	002690373	S	3847	GCCACTAAGCTGTCCTGGAGGACATTGTCTTTATGAAACACACCTGGAAT	12	+	81704810-81704859	12qC3	Mus musculus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1 (Galntl1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]	AI415388; 5730405L21Rik; mpp-GalNAc-T16	AI415388; 5730405L21Rik; mpp-GalNAc-T16
Mus musculus	Riken	ILMN_206254	ILMN_206254	C230011D12RIK	ri|C230011D12|PX00173C05|AK082126|1916					AK082126	C230011D12Rik		ILMN_1218709	002630347	S	1639	GCGCCATCACTGAACAACATGCTAGACAAAGGGAGATCCTCTACCTTCGC										
Mus musculus	MEEBO	ILMN_220592	ILMN_220592	5930431H10	scl0244690.3_117	NM_173776.2			31343367	NM_173776.2	5930431H10		ILMN_1242011	004040441	S	1818	CTGTGTGGAGTAACCTAAGAGGGATTCAGAGAACCTAGAAGCTATCCAGC										
Mus musculus	Riken	ILMN_203248	ILMN_203248	1620402D19RIK	ri|1620402D19|PX00101P04|AK028073|2221					AK028073	1620402D19Rik		ILMN_1243348	000160477	S	1796	CACAGGGAACAAACAAGAGGAGGCGCTAAGGATCAGCTCAATGGTAGAGC										
Mus musculus	Riken	ILMN_205304	ILMN_205304	4832440E21RIK	ri|4832440E21|PX00313O22|AK029339|2712					AK029339	4832440E21Rik		ILMN_1238224	006770372	S	2614	TACCAAATCTAAGGGAAGAAGCGTGGCGGTTGAGAGGCGTTGAGGTGGCC										
Mus musculus	RefSeq	ILMN_196577	ILMN_196577	D030022P06RIK	NM_178800.1	NM_178800.1			30520286	NM_178800.1	D030022P06Rik		ILMN_2524892	003520044	S	1958	GGGGGCTGTCTTCCTTTCCACCAAAGTAGGGGGTAGGTTACTGGTTGTCA										
Mus musculus	Riken	ILMN_206691	ILMN_206691	MAN2B2	ri|1110034E14|ZA00008I01|AK075649|1728					AK075649	Man2b2		ILMN_1244876	001190619	S	1629	AGGGGACCACTGGGCATGTTTACAGATGAGGCCATGCTGGATTCCCAACA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IEA]		
Mus musculus	RefSeq	ILMN_258074	ILMN_258074	DNAJB6	NM_001037940.1	NM_001037940.1		23950	83816906	NM_001037940.1	Dnajb6	NP_001033029.1	ILMN_3060442	006840356	I	2330	CCACAAAGTGTTTGCTGAGTTTGCTTGGTTTTGGTGGGAGGTGGTGTGGG	5	+	30117008-30117057	5qB1	Mus musculus DnaJ (Hsp40) homolog, subfamily B, member 6 (Dnajb6), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	Mrj; MGC102124; mDj4	Mrj; MGC102124; mDj4
Mus musculus	Riken	ILMN_206224	ILMN_206224	SYN3	ri|D130078B02|PX00186G13|AK084032|4004					AK084032	Syn3		ILMN_2578508	001240246	S	3636	GTGAGAGATCTGGAGGTTGGTTCCAACTGAGTGCACATAATTTCCCCACC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IDA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219952	ILMN_219952	MANBA	NM_027288.2	NM_027288.2		110173	31980635	NM_027288.2	Manba	NP_081564.2	ILMN_1243565	000780376	S	2840	CTCCCAGGATTGTGGTTTTGTCCCACAGCTAAAGCACGGCCAGAAGACTC	3	+	135233590-135233639	3qG3	Mus musculus mannosidase, beta A, lysosomal (Manba), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-mannose residues in beta-D-mannosides [goid 4567] [evidence IDA]	B930014J03Rik; Bmn; 2410030O07Rik	B930014J03Rik; Bmn; 2410030O07Rik
Mus musculus	RefSeq	ILMN_219952	ILMN_219952	MANBA	NM_027288.2	NM_027288.2		110173	31980635	NM_027288.2	Manba	NP_081564.2	ILMN_2835723	005690139	S	3288	GGCCCCGACTATACTGTTGAATTTTTCACTTCTCCTCGTCCTGAGTGTTC	3	+	135234038-135234087	3qG3	Mus musculus mannosidase, beta A, lysosomal (Manba), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-mannose residues in beta-D-mannosides [goid 4567] [evidence IDA]	B930014J03Rik; Bmn; 2410030O07Rik	B930014J03Rik; Bmn; 2410030O07Rik
Mus musculus	RefSeq	ILMN_261318	ILMN_261318	PRKAA2	NM_178143.1	NM_178143.1		108079	54792085	NM_178143.1	Prkaa2	NP_835279.1	ILMN_2803138	002480202	S	2301	TGATAACAGGAGCCTAATCTCCCAGCTTCCTGACAGTTGTGCAAGGCGCC	4	-	104708076-104708125	4qC6	Mus musculus protein kinase, AMP-activated, alpha 2 catalytic subunit (Prkaa2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence TAS]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of AMP [goid 4679] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	A830082D05; 2310008I11Rik	A830082D05; 2310008I11Rik
Mus musculus	RefSeq	ILMN_218429	ILMN_218429	HOXC6	NM_010465.2	NM_010465.2		15425	114145518	NM_010465.2	Hoxc6	NP_034595.2	ILMN_1217328	005550343	S	1510	CCCTACGTGTTATCCTCCTGTATAAATCCGACCTCTGGATCCGTTCTCGA	15	+	102842230-102842279	15qF3	Mus musculus homeo box C6 (Hoxc6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Hox-6.1; Hox-3.3	Hox-6.1; Hox-3.3
Mus musculus	RefSeq	ILMN_216215	ILMN_216215	CMTM2A	NM_027022.4	NM_027022.4		73381	126157473	NM_027022.4	Cmtm2a	NP_081298.1	ILMN_1214978	003780452	S	708	TCACCATTATTTTCTGTTTCGTAGTCTTGTATATGTGCAGACGTGACAAG	8	-	106805268-106805317	8qD3	Mus musculus CKLF-like MARVEL transmembrane domain containing 2A (Cmtm2a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IPI]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	Cklfsf2-1b; Cklf1; Cklfsf2a; 1700041N15Rik; UCK-1; CKLF4; 1700063K20Rik; 1700001K04Rik; CKLF3; ARR19; C32; AI449770; Cklf; CKLF5	Cklfsf2-1b; Cklf1; Cklfsf2a; 1700041N15Rik; UCK-1; CKLF4; 1700063K20Rik; 1700001K04Rik; CKLF3; ARR19; C32; AI449770; Cklf; CKLF5
Mus musculus	RefSeq	ILMN_215220	ILMN_215220	CUL4B	NM_028288.3	NM_028288.3		72584	33186866	NM_028288.3	Cul4b	NP_082564.2	ILMN_2656909	003310767	S	3234	ACCTGGGTCTTCATGATTCCTTTTGGAACTGGGGAAGAGATCCCTATGGC	X	-	34777961-34778010	XqA3.3	Mus musculus cullin 4B (Cul4b), mRNA.				mKIAA0695; 2700050M05Rik; KIAA0695; AA409770	mKIAA0695; 2700050M05Rik; KIAA0695; AA409770
Mus musculus	RefSeq	ILMN_220866	ILMN_220866	TSPO	NM_009775.3	NM_009775.3		12257	141803242	NM_009775.3	Tspo	NP_033905.2	ILMN_2727921	004670544	S	124	ATGGGAGCCTACTTTGTACGTGGCGAGGGCCTCCGGTGGTATGCTAGCTT	15	+	83401904-83401953	15qE1	Mus musculus translocator protein (Tspo), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IBP; PBR; Bzrp	IBP; PBR; Bzrp
Mus musculus	RefSeq	ILMN_223167	ILMN_223167	PPEF2	NM_011148.2	NM_011148.2		19023	31560803	NM_011148.2	Ppef2	NP_035278.1	ILMN_2760183	001440762	S	2504	TAGAGGGCCACGCCTCTGCTTGCCTGCAGTCCACAGACACTGCTGAGAGT	5	-	92656029-92656078	5qE2	Mus musculus protein phosphatase, EF hand calcium-binding domain 2 (Ppef2), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The series of events involved in sensory perception in which a sensory stimulus is received by a cell and converted into a molecular signal [goid 50906] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISS]		
Mus musculus	RefSeq	ILMN_211744	ILMN_211744	FYTTD1	NM_027226.3	NM_027226.3		69823	141803191	NM_027226.3	Fyttd1	NP_081502.2	ILMN_2619079	004070195	S	4000	CAGACCCCATGTCGAAAAACTTACACACAGAGGAGAAAGACTGGTGGTCG	16	+	32908708-32908757	16qB3	Mus musculus forty-two-three domain containing 1 (Fyttd1), mRNA.				3830421F13Rik; 4933423A17Rik; AI098218; 3830411L18Rik; AW539567; 2010005M05Rik; C85190	3830421F13Rik; 4933423A17Rik; AI098218; 3830411L18Rik; AW539567; 2010005M05Rik; C85190
Mus musculus	Riken	ILMN_204777	ILMN_204777	C130020P08RIK	ri|C130020P08|PX00168D09|AK047906|3211					AK047906	C130020P08Rik		ILMN_1238440	005720224	S	2450	GGCCTCTGACTCGGTGAGAATTTCCTAATAACCACTGATGTCCTGCAAGG										
Mus musculus	RefSeq	ILMN_212201	ILMN_212201	MGAT4C	NM_026243.3	NM_026243.3		67569	142385876	NM_026243.3	Mgat4c	NP_080519.2	ILMN_2623903	006450528	S	2412	GAGATGGCTTACCGTTAGTCCATTCGTACAAACAATTTCAGTAAATGTAG	10	+	101852758-101852807	10qD1	Mus musculus mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) (Mgat4c), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + (N-acetyl-beta-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R [goid 8454] [evidence IEA]	9130411I17Rik; GntIVh	9130411I17Rik; GntIVh
Mus musculus	RefSeq	ILMN_215707	ILMN_238976	OLFR44	NM_146830.2	NM_146830.2		18343	134948544	NM_146830.2	Olfr44	NP_667041.2	ILMN_1222244	002680100	S	741	GCCTTCAGTACTTGCAGTTCTCACATCTTGGCTGTTGCTGTCTTCTTTGG	9	-	39292069-39292118	9qA5.1	Mus musculus olfactory receptor 44 (Olfr44), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	IB3; MOR171-5	IB3; MOR171-5
Mus musculus	RefSeq	ILMN_191270	ILMN_191270	FASL	NM_010177.3	NM_010177.3		14103	118130000	NM_010177.3	Fasl	NP_034307.1	ILMN_1248413	001740692	S	1387	CACTCACTTCCAGGGTGGGTCTACTTACTACCTCACAGAGGCCGTTTTTG	1	-	163711320-163711369	1qH2.1	Mus musculus Fas ligand (TNF superfamily, member 6) (Fasl), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]; Programmed cell death that occurs in the developing retina [goid 46666] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IGI]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	Tnfsf6; CD95L; APT1LG1; CD178; Fas-Ligand; Faslg; Fas-L; gld	Tnfsf6; CD95L; APT1LG1; CD178; Fas-Ligand; Faslg; Fas-L; gld
Mus musculus	RefSeq	ILMN_257047	ILMN_257047	OLFR624	NM_001011865.2	NM_001011865.2		258189	111185925	NM_001011865.2	Olfr624	NP_001011865.2	ILMN_2944019	007550367	S	132	AATCCGAACAGAGTCAAGTCTGCACCAGCCCATGTTCTATTTCCTGGCCA	7	-	110819362-110819411	7qE3	Mus musculus olfactory receptor 624 (Olfr624), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR4-2P	MOR4-2P
Mus musculus	RefSeq	ILMN_189367	ILMN_189367	TNFSF4	NM_009452.1	NM_009452.1		22164	6678472	NM_009452.1	Tnfsf4	NP_033478.1	ILMN_2460662	000870451	S	1312	CCCACCAAAGAACCACGTCAGCGATGCAAAGAAAACCAGGAGAGCTTTGT	1	+	163348060-163348109	1qH2.1	Mus musculus tumor necrosis factor (ligand) superfamily, member 4 (Tnfsf4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [evidence IPI]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IMP]	Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Txgp1l; TXGP1; gp34; Ox40l; Ath1; CD134L; Ath-1; OX-40L	Txgp1l; TXGP1; gp34; Ox40l; Ath1; CD134L; Ath-1; OX-40L
Mus musculus	RefSeq	ILMN_199660	ILMN_199660	LOC382853	XM_356711.1	XM_356711.1			38075709	XM_356711.1	LOC382853		ILMN_2536029	006350296	S	221	GACTCTACTGTCAGGGGGGTCCTGACTTCTACGGCAGCAGTGTGTGCTAC										
Mus musculus	RefSeq	ILMN_193735	ILMN_233249	TOMM7	NM_025394.2	NM_025394.2		66169	141801714	NM_025394.2	Tomm7	NP_079670.1	ILMN_2499944	005090402	S	27	TCGTCGCCATGGTGAAGCTGAGCAAAGAAGCCAAACAGAGGCTGCAGCAG	5	-	23349849-23349891:23349892-23349898	5qA3	Mus musculus translocase of outer mitochondrial membrane 7 homolog (yeast) (Tomm7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	AW047273; TOM7; 1110020J08Rik	AW047273; TOM7; 1110020J08Rik
Mus musculus	RefSeq	ILMN_196190	ILMN_196190	YBX2	NM_016875.2	NM_016875.2		53422	117956376	NM_016875.2	Ybx2	NP_058571.2	ILMN_3014935	000580521	I	61	TACTGGACCCGGCGGGATGAGCGAGGCGGAGGCGTCAGTGGTGGCGACAG	11	+	69749461-69749476:69749403-69749436	11qB3	Mus musculus Y box protein 2 (Ybx2), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IDA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules [goid 48255] [evidence IMP]; Any process that stops or reduces the rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51100] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with a lipid [goid 8289] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with any complex of RNA and protein [goid 43021] [evidence IDA]	MGC118270; Msy2	MGC118270; Msy2
Mus musculus	RefSeq	ILMN_196190	ILMN_196190	YBX2	NM_016875.2	NM_016875.2		53422	117956376	NM_016875.2	Ybx2	NP_058571.2	ILMN_3086192	002490349	A	1476	CCCTTCGACCTCCCCCCAACACCTCTGAAGCCATTTTATGAACTGTCATG	11	+	69753492-69753541	11qB3	Mus musculus Y box protein 2 (Ybx2), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IDA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules [goid 48255] [evidence IMP]; Any process that stops or reduces the rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51100] [evidence IMP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with a lipid [goid 8289] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IDA]; Interacting selectively with any complex of RNA and protein [goid 43021] [evidence IDA]	MGC118270; Msy2	MGC118270; Msy2
Mus musculus	MEEBO	ILMN_218262	ILMN_218262	GTLF3A	scl40138.2.1_26	NM_025293.1			13384643	NM_025293.1	Gtlf3a		ILMN_2693691	002570341	S	935	GGAGCAGATCAGGTAACATACAGGAAGCTGAGCACGAGAAGTGCTGACTC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	MEEBO	ILMN_223035	ILMN_223035	9430079M16RIK	scl28372.11.1_5	NM_175414.2			31341828	NM_175414.2	9430079M16Rik		ILMN_2758459	007040465	S	739	GCTGTGGTTTGATGACAACAAGCACGTGCTAGGCACCGTGGGCATGTGCA										
Mus musculus	RefSeq	ILMN_220055	ILMN_220055	PRDX4	NM_016764.3	NM_016764.3		53381	146134468	NM_016764.3	Prdx4	NP_058044.1	ILMN_2717045	002000180	S	757	CTGTCGGAAGATCAGTGGACGAGACACTGCGTTTGGTTCAAGCCTTCCAG				XqF3	Mus musculus peroxiredoxin 4 (Prdx4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AOE372; TRANK	AOE372; TRANK
Mus musculus	RefSeq	ILMN_187501	ILMN_313390	LOC100048079	XM_001479478.1	XM_001479478.1		100048079	149263172	XM_001479478.1	LOC100048079	XP_001479528.1	ILMN_2444696	005130719	S	2960	CTATGACTACAAGTGCTTTGCTACACATACACTCCTGAACCATATGAATC					PREDICTED: Mus musculus similar to Zinc finger and BTB domain containing 1 (LOC100048079), mRNA.					
Mus musculus	RefSeq	ILMN_218720	ILMN_218720	OLFR646	NM_147056.1	NM_147056.1		259058	22128838	NM_147056.1	Olfr646	NP_667267.1	ILMN_1219024	004120707	S	881	CCAAGGAGATTCGGAGTCGGCTTCTAAAACTGCTTCACTTGGGGAAGGAC	7	+	111255675-111255724	7qE3	Mus musculus olfactory receptor 646 (Olfr646), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MGC157537; MOR33-2	MGC157537; MOR33-2
Mus musculus	MEEBO	ILMN_212304	ILMN_212304	D830024N08RIK	scl34582.1.1_11	NM_177031.2			31342635	NM_177031.2	D830024N08Rik		ILMN_1232568	001850600	S	3921	ATCCGTACCCAGTTTTACTATATTTCTTTAATCCTTTATGGTGCTAGAGG										
Mus musculus	RefSeq	ILMN_228110	ILMN_228110	OTTMUSG00000013918	NM_001013800.1	NM_001013800.1		433315	85701485	NM_001013800.1	OTTMUSG00000013918	NP_001013822.1	ILMN_2961073	001780035	S	1069	GCGAGCAAGACCCATGTGCTCTGCGGCTCCAGGTATGAAAGACTTTTAGC	1	+	63902912-63902961	1qC2	Mus musculus predicted gene, OTTMUSG00000013918 (OTTMUSG00000013918), mRNA.					
Mus musculus	RefSeq	ILMN_219314	ILMN_219314	NUBP1	NM_011955.1	NM_011955.1		26425	6754905	NM_011955.1	Nubp1	NP_036085.1	ILMN_2765400	006450220	S	854	GCCAGTCTTTTTTTGTCGAAGCTCCAGATTCACCAGCCACAGCAGCCTAC	16	+	10422946-10422995	16qA1	Mus musculus nucleotide binding protein 1 (Nubp1), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_219314	ILMN_219314	NUBP1	NM_011955.1	NM_011955.1		26425	6754905	NM_011955.1	Nubp1	NP_036085.1	ILMN_2707127	000770438	S	1123	CTATCTGCCTATTTCCTCGAGATCAAAGGTACGGGCGCTCTGCATCCAGG	16	+	10423550-10423599	16qA1	Mus musculus nucleotide binding protein 1 (Nubp1), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199337	ILMN_226458	LOC673135	XM_001004681.1	XM_001004681.1		673135	94418703	XM_001004681.1	LOC673135	XP_001004681.1	ILMN_1223599	000050370	S	7	CCAGAAGGTGCACAAGGAGCTTCAGGCAGAGTCACCCATTTTGGTCTTTC					PREDICTED: Mus musculus similar to component of Sp100-rs (LOC673135), mRNA.					
Mus musculus	RefSeq	ILMN_223533	ILMN_241257	PRDM9	XM_911812.3	XM_911812.3		213389	149268973	XM_911812.3	Prdm9	XP_916905.2	ILMN_2765331	004220520	S	1335	GTGAGCTTCTGGTCTGGTATGGGGATGAGTACGGCCAGGAACTGGGCATT				17qA2	PREDICTED: Mus musculus PR domain containing 9, transcript variant 3 (Prdm9), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IC ]	Progression through prophase of meiosis I; divided into several stages [goid 7128] [evidence IMP]; The modification of histones by addition of methyl groups [goid 16571] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IMP]	Catalysis of the addition of a methyl group onto lysine at position 4 of the histone H3 protein [goid 42800] [evidence IDA]; Catalysis of the addition of a methyl group onto lysine at position 4 of the histone H3 protein [goid 42800] [evidence IMP]		
Mus musculus	RefSeq	ILMN_210405	ILMN_210405	ABR	NM_198894.1	NM_198894.1		109934	38683819	NM_198894.1	Abr	NP_942597.1	ILMN_2605311	003710044	S	1762	TGTCAGCAAAGCCAAGACCAGGGTGTTTCGGGACACGACAGAGCCCAAGT	11	-	76265840-76265889	11qB5	Mus musculus active BCR-related gene (Abr), transcript variant 2, mRNA.		The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	AU042359; 6330400K15Rik	AU042359; 6330400K15Rik
Mus musculus	RefSeq	ILMN_210405	ILMN_210405	ABR	NM_198894.1	NM_198894.1		109934	38683819	NM_198894.1	Abr	NP_942597.1	ILMN_2687062	006180463	S	4798	TGCACCAAGGAAGTATCTGGTGGTTCTCCTGAGATGGGGGCCTTGCAGCC	11	-	76230498-76230547	11qB5	Mus musculus active BCR-related gene (Abr), transcript variant 2, mRNA.		The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IGI]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence TAS]	AU042359; 6330400K15Rik	AU042359; 6330400K15Rik
Mus musculus	MEEBO	ILMN_222493	ILMN_222493	D630048P19RIK	scl0403187.2_39	NM_207525.1			46430511	NM_207525.1	D630048P19Rik		ILMN_2750314	001400593	S	1744	AAGGCCCCTACTATGCTGTTTGGCTCTTCCGGCAGCCTACTCATGGCTTC										
Mus musculus	RefSeq	ILMN_218298	ILMN_218298	GINS4	NM_024240.3	NM_024240.3		109145	31340664	NM_024240.3	Gins4	NP_077202.1	ILMN_2694074	004200047	S	1012	AGGCGCCGATGCAGAATTCCCTTCGTTGTCACAGCCTTCTCCTAAATTCC	8	-	24692448-24692497	8qA2	Mus musculus GINS complex subunit 4 (Sld5 homolog) (Gins4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Sld5; 4933405K01Rik; 2810037C03Rik	Sld5; 4933405K01Rik; 2810037C03Rik
Mus musculus	RefSeq	ILMN_209203	ILMN_209203	BTBD7	NM_172806.2	NM_172806.2		238386	31044480	NM_172806.2	Btbd7	NP_766394.2	ILMN_2593568	000990523	S	4146	GTTAAACTACTTTATTGCTACATTTAAAGGACTGTATTTTCATACTTTTT	12	-	104022968-104023017	12qE	Mus musculus BTB (POZ) domain containing 7 (Btbd7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	8030448M07; 5730507E09Rik; MGC49574; mKIAA1525; FUP1; E130118E17Rik	8030448M07; 5730507E09Rik; MGC49574; mKIAA1525; FUP1; E130118E17Rik
Mus musculus	RefSeq	ILMN_217389	ILMN_217389	2310036O22RIK	NM_026760.2	NM_026760.2		68544	85362707	NM_026760.2	2310036O22Rik	NP_081036.2	ILMN_1229716	006060392	S	591	CCCTCCCGGGTGCTCACTACCTGGGACTCTCTGCGATGTACATAATATTT	8	+	87553884-87553933	8qC3	Mus musculus RIKEN cDNA 2310036O22 gene (2310036O22Rik), mRNA.				1110002H14Rik; AI854688	1110002H14Rik; AI854688
Mus musculus	RefSeq	ILMN_213333	ILMN_229578	KBTBD5	NM_028202.2	NM_028202.2		72330	141802237	NM_028202.2	Kbtbd5	NP_082478.1	ILMN_2636054	001440154	S	1118	GCCGGTGGCCTCTTCTACAATGAGGACAACAAGGAGGACCCTATGAGTGC	9	+	121687983-121688032	9qF4	Mus musculus kelch repeat and BTB (POZ) domain containing 5 (Kbtbd5), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2310024D23Rik	2310024D23Rik
Mus musculus	RefSeq	ILMN_210368	ILMN_210368	SLC2A2	NM_031197.1	NM_031197.1		20526	13654261	NM_031197.1	Slc2a2	NP_112474.1	ILMN_2767739	000460273	S	2176	GTATGTTAAACTGTATTTGTAATGAGAAACTCTTTTTTTATAGCTACCAA	3	+	28626962-28627011	3qA3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 2 (Slc2a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence TAS]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	AI266973; Glut2; Glut-2	AI266973; Glut2; Glut-2
Mus musculus	RefSeq	ILMN_210368	ILMN_210368	SLC2A2	NM_031197.1	NM_031197.1		20526	13654261	NM_031197.1	Slc2a2	NP_112474.1	ILMN_2604904	002760463	S	502	GGACCGGCACACGCCCTCATCATTGCTGGACGAAGTGTATCAGGACTGTA	3	+	28612708-28612739:28616338-28616355	3qA3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 2 (Slc2a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence TAS]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	AI266973; Glut2; Glut-2	AI266973; Glut2; Glut-2
Mus musculus	RefSeq	ILMN_210368	ILMN_210368	SLC2A2	NM_031197.1	NM_031197.1		20526	13654261	NM_031197.1	Slc2a2	NP_112474.1	ILMN_2861259	002680593	S	2025	CCCAGATCAGAAGCTAAAGGACATACGGCTGGTGTCAGCTAAGGCTCACA	3	+	28626811-28626860	3qA3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 2 (Slc2a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence TAS]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	AI266973; Glut2; Glut-2	AI266973; Glut2; Glut-2
Mus musculus	RefSeq	ILMN_210368	ILMN_210368	SLC2A2	NM_031197.1	NM_031197.1		20526	13654261	NM_031197.1	Slc2a2	NP_112474.1	ILMN_2750284	000630487	S	680	GCCTCAGCTTTATTCTGGGCAATCAGGATCATTGGCACATCCTACTTGGC	3	+	28617621-28617670	3qA3	Mus musculus solute carrier family 2 (facilitated glucose transporter), member 2 (Slc2a2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence TAS]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	AI266973; Glut2; Glut-2	AI266973; Glut2; Glut-2
Mus musculus	RefSeq	ILMN_189492	ILMN_189492	TSPAN3	NM_019793.2	NM_019793.2		56434	31981021	NM_019793.2	Tspan3	NP_062767.2	ILMN_1232099	003130497	S	453	CCTGCTCTTGGTTTTCGTCACAGAAGTGGTTGTTGTGGTTTTGGGATACG	9	-	55994906-55994955	9qB	Mus musculus tetraspanin 3 (Tspan3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Tm4sf8; Tspan-3; 1700055K04Rik; TM4-A	Tm4sf8; Tspan-3; 1700055K04Rik; TM4-A
Mus musculus	RefSeq	ILMN_189492	ILMN_189492	TSPAN3	NM_019793.2	NM_019793.2		56434	31981021	NM_019793.2	Tspan3	NP_062767.2	ILMN_1251499	006840411	S	1611	GAGATAATGTACCCATGGAGACTAGCAAAATAGTATGTAGATGTGATCTC	9	-	55983737-55983786	9qB	Mus musculus tetraspanin 3 (Tspan3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			Tm4sf8; Tspan-3; 1700055K04Rik; TM4-A	Tm4sf8; Tspan-3; 1700055K04Rik; TM4-A
Mus musculus	RefSeq	ILMN_211844	ILMN_211844	ALS2	NM_028717.3	NM_028717.3		74018	142366376	NM_028717.3	Als2	NP_082993.1	ILMN_2717470	005910681	S	6181	GCGCAGTGGCCTGACTCATGGGAAATGACTCAGCAGGCGGCAACTACTTT	1	-	59219869-59219918	1qC1.3	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) homolog (human) (Als2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [evidence IDA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process by which receptor molecules are returned to an active state and in an active cellular location after they have been stimulated by a ligand. An active state is when the receptor is ready to receive a signal [goid 1881] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence ISO]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence ISO]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence ISO]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence ISO]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISO]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence ISO]	MGC27807; mKIAA1563; 3222402C23Rik; Alsin; Als2cr6; 9430073A21Rik	MGC27807; mKIAA1563; 3222402C23Rik; Alsin; Als2cr6; 9430073A21Rik
Mus musculus	RefSeq	ILMN_211844	ILMN_211844	ALS2	NM_028717.3	NM_028717.3		74018	142366376	NM_028717.3	Als2	NP_082993.1	ILMN_2620053	003990546	S	5130	GGCACAGGCACCGACTGGAGGCTGATGGGGCAAAGAACAGTGTTGAATAC	1	-	59220920-59220969	1qC1.3	Mus musculus amyotrophic lateral sclerosis 2 (juvenile) homolog (human) (Als2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISO]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISO]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence ISO]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IDA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [evidence IDA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IMP]; The process by which receptor molecules are returned to an active state and in an active cellular location after they have been stimulated by a ligand. An active state is when the receptor is ready to receive a signal [goid 1881] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [evidence ISO]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IMP]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence ISO]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence ISO]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence ISO]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence ISO]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISO]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence ISO]	MGC27807; mKIAA1563; 3222402C23Rik; Alsin; Als2cr6; 9430073A21Rik	MGC27807; mKIAA1563; 3222402C23Rik; Alsin; Als2cr6; 9430073A21Rik
Mus musculus	RefSeq	ILMN_185710	ILMN_320419	MRVI1	NM_010826.4	NM_010826.4		17540	154275768	NM_010826.4	Mrvi1	NP_034956.2	ILMN_2429346	002600100	S	81	TCGCCTGATCTCTGGTGTTGATGCAAAACCAAAGAGCTCATCTGTGGCTC				7qF1	Mus musculus MRV integration site 1 (Mrvi1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]			BB115629; Irag; Ris1	BB115629; Irag; Ris1
Mus musculus	RefSeq	ILMN_194550	ILMN_194550	WFS1	NM_011716.2	NM_011716.2		22393	119672922	NM_011716.2	Wfs1	NP_035846.1	ILMN_1224079	005050669	S	2983	CCTGCTGGAGGGTGGTTCTCTTTAGCACTGTCCACTTTGAATGCCGAGTG	5	-	37357874-37357923	5qB3	Mus musculus Wolfram syndrome 1 homolog (human) (Wfs1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			wolframin; AI481085	wolframin; AI481085
Mus musculus	RefSeq	ILMN_212792	ILMN_212792	2610002M06RIK	NM_025921.2	NM_025921.2		67028	142381786	NM_025921.2	2610002M06Rik	NP_080197.2	ILMN_2630362	005870594	S	712	GTCTTCGTGATCAAGTGTAACTTAAATAACTGGTGCTTCTGTTCCTCCAC	X	-	104983117-104983147:104983148-104983166	XqD	Mus musculus RIKEN cDNA 2610002M06 gene (2610002M06Rik), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		RP23-284F8.1; AI876413	RP23-284F8.1; AI876413
Mus musculus	RefSeq	ILMN_215362	ILMN_215362	TCEB2	NM_026305.1	NM_026305.1		67673	13385799	NM_026305.1	Tceb2	NP_080581.1	ILMN_1216504	001340563	S	163	GATGACCAGCTCCTTGATGATGGCAAAACTCTGGGCGAGTGTGGCTTCAC	17	-	23555145-23555194	17qA3.3	Mus musculus transcription elongation factor B (SIII), polypeptide 2 (Tceb2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	0610040H15Rik	0610040H15Rik
Mus musculus	RefSeq	ILMN_195521	ILMN_314659	PJA1	NM_001083110.1	NM_001083110.1		18744	133506755	NM_001083110.1	Pja1	NP_001076579.1	ILMN_2516312	006580181	S	509	ATGATGCGAAGGAAGAGTGTGGCAAGGTAGAATCACCCCCTGCAGCGAGG	X	-	96663214-96663263	XqC3	Mus musculus praja1, RING-H2 motif containing (Pja1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]		
Mus musculus	MEEBO	ILMN_187490	ILMN_187490	CDH3	scl33383.18_43				45496815	NM_007665	Cdh3		ILMN_2444594	006770377	S	20	ACGTGGTAAGGGCTACCGCTCACTCGGAACTTAGAAAGCCAGCAGCACTT						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An adherens junction which connects two cells to each other [goid 5913] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IMP]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198686	ILMN_234878	LOC245663	XM_909084.2	XM_909084.2		245663	94408309	XM_909084.2	LOC245663	XP_914177.2	ILMN_1233476	002510021	S	507	CTCCAAGGAAGCTGAGTTGATTGTCAACTCGCTGGCCACAGCAGGTGCTG				XqF2	PREDICTED: Mus musculus similar to prohibitin (LOC245663), mRNA.					
Mus musculus	MEEBO	ILMN_191525	ILMN_191525	EP300	scl00328572.1_144				51829819	XM_484488	Ep300		ILMN_2479839	006560746	S	19	CTAGCTGGCAGTGAACATTTGGGAAGCAGGGTCATGTGGATGTTTATAAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; A protein complex that possesses histone acetyltransferase activity [goid 123] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IGI]	Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_200230	ILMN_200230	LOC386008	XM_359032.1	XM_359032.1			38081011	XM_359032.1	LOC386008		ILMN_1236191	007550097	S	520	GAGCATGTGGCCATCCCCCATGTCTGCCTGCACAGAGCACCAGAACTCTG										
Mus musculus	MEEBO	ILMN_194877	ILMN_194877	GPR124	scl000055.1_1				16905078	NM_054044	Gpr124		ILMN_2510455	005090390	S	10	GAGTTTTGCAAGATTTTAATATATTAAAACAAAGAGGCATCTGCTGGAAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_223841	ILMN_223841	4432416J03RIK	scl35908.8_513				21313425	NM_030069	4432416J03Rik		ILMN_2770236	006350221	S	2998	GATTCTATGTGACCCAAGAAGTATTATACAGGAGTCTCTCCAAAAACCTC										
Mus musculus	MEEBO	ILMN_222968	ILMN_222968	BLOC1S2	scl52449.4.351_12	XM_193940.2			38085177	XM_193940.2	Bloc1s2		ILMN_2757428	004730445	S	345	GACCAGATCAACATGATTGAGGAGCAGGTGGCAGCTCTGGAGCAGGCAGC						That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_252258	ILMN_252258	2210021J22RIK	NM_197998.1	NM_197998.1		72355	39930552	NM_197998.1	2210021J22Rik	NP_932115.1	ILMN_2781118	006380438	S	328	AAGGCCAGGTTTCTGGTCCTCGGCTCTCGGTGCAGTGTGTGCAGCAGGCT	15	-	85638701-85638750	15qE2	Mus musculus RIKEN cDNA 2210021J22 gene (2210021J22Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211885	ILMN_211885	NPTX2	NM_016789.2	NM_016789.2		53324	31560467	NM_016789.2	Nptx2	NP_058069.1	ILMN_2620406	003120497	S	2301	CCATCGAGTATTTCCCCCGGAACTGGAGATTCGGGCGTCATTTGGCTGCT	5	+	145318113-145318162	5qG2	Mus musculus neuronal pentraxin 2 (Nptx2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Narp; np2	Narp; np2
Mus musculus	RefSeq	ILMN_242509	ILMN_242509	KLRI1	NM_001012520.1	NM_001012520.1		503550	60593096	NM_001012520.1	Klri1	NP_001012538.1	ILMN_3142296	001240639	A	365	CCTCTTCGGTGTCCAAAGGATGACGCCTCCTGTGATCTTTGTTCCAGTGA	6	-	129648919-129648947:129653333-129653353	6qF3	Mus musculus killer cell lectin-like receptor family I member 1 (Klri1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_242509	ILMN_242509	KLRI1	NM_001012520.1	NM_001012520.1		503550	60593096	NM_001012520.1	Klri1	NP_001012538.1	ILMN_3064444	003890452	I	1	ACAGAACAAAATGCTTCACAGTAAACGCCGGGAATATACAGCAAACAATC	6	-	129667100-129667140:129667141-129667149	6qF3	Mus musculus killer cell lectin-like receptor family I member 1 (Klri1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_242509	ILMN_242509	KLRI1	NM_001012520.1	NM_001012520.1		503550	60593096	NM_001012520.1	Klri1	NP_001012538.1	ILMN_3142299	000780037	A	368	CTTCGGTGTCCAAAGGATGACGCCTCCTGTGATCTTTGTTCCAGTGACTG	6	-	129648916-129648947:129653333-129653350	6qF3	Mus musculus killer cell lectin-like receptor family I member 1 (Klri1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196129	ILMN_226361	USP31	XM_992065.1	XM_992065.1		76179	94381278	XM_992065.1	Usp31	XP_997159.1	ILMN_1219308	001740307	S	3778	TGCAGATGACAAGACAGAGAAAGGCCATCAGCCTCCCGGCTCACAGCAGC				7qF2	PREDICTED: Mus musculus ubiquitin specific peptidase 31 (Usp31), mRNA.					
Mus musculus	RefSeq	ILMN_196129	ILMN_226361	USP31	XM_992065.1	XM_992065.1		76179	94381278	XM_992065.1	Usp31	XP_997159.1	ILMN_1249459	004890379	S	10073	TTTATGTTGAAAACGTTTTATTTCTGAGACAGCAGTTGGTTGTATAGTAT				7qF2	PREDICTED: Mus musculus ubiquitin specific peptidase 31 (Usp31), mRNA.					
Mus musculus	MEEBO	ILMN_192766	ILMN_192766	NF2	scl40578.23_535				31982774	NM_010898	Nf2		ILMN_1245990	005860221	S	2501	CCCTATAAGAGAGGTTTCTCACAATGTGTTCTAGGTTCTCCCTTGCCTCC						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IMP]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells [goid 45216] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_186481	ILMN_255703	LOC546629	XM_903552.2	XM_903552.2		546629	94397472	XM_903552.2	LOC546629	XP_908645.2	ILMN_2435882	002000543	S	178	GAGCCTGGGAAGCGTCTTCAGTTCATCATAGACATCCGTTCAAATATGGA					PREDICTED: Mus musculus similar to T-cell receptor alpha-chain (LOC546629), mRNA.					
Mus musculus	RefSeq	ILMN_195277	ILMN_255703	LOC546629	XM_903552.2	XM_903552.2		546629	94397472	XM_903552.2	LOC546629	XP_908645.2	ILMN_2514130	001190333	S	448	GTGACTGTGATGCTGTTTGTGTTTGGGAGGACCCATGGAGACTCAGTGAC					PREDICTED: Mus musculus similar to T-cell receptor alpha-chain (LOC546629), mRNA.					
Mus musculus	Riken	ILMN_203837	ILMN_203837	A230095P17RIK	ri|A230095P17|PX00130I06|AK039099|1039					AK039099	A230095P17Rik		ILMN_1226226	006380767	S	791	AGCGAGGCCGGTGCAGGGTCCATTATGTAAGCTTGTAGGAATGCGCGTGC										
Mus musculus	RefSeq	ILMN_197870	ILMN_197870	LOC236069	XM_135479.2	XM_135479.2			38079021	XM_135479.2	LOC236069		ILMN_1241131	007510112	S	42	CAAGAGGGACAAGAAGAAGGAACGGAGCAGTCGGGCGGCCATCGTTGCGA										
Mus musculus	Riken	ILMN_205832	ILMN_205832	A530078N03RIK	ri|A530078N03|PX00142O12|AK041067|2311					AK041067	A530078N03Rik		ILMN_1226961	003060091	S	711	GGGAGCCCAAGGGAGAAACTCTAGGCAGGAGCTGAAGCAGTGCCATGAAG										
Mus musculus	Riken	ILMN_203011	ILMN_203011	6030424L16RIK	ri|6030424L16|PX00056B13|AK031410|2744					AK031410	6030424L16Rik		ILMN_1256724	001940356	S	2499	CTGCGAGCAGCTGTGGAGGAAATGGGCATCCTTGGTGTAGTCACATGGTT										
Mus musculus	RefSeq	ILMN_193958	ILMN_193958	TRAF7	NM_153792.1	NM_153792.1		224619	24418904	NM_153792.1	Traf7	NP_722487.1	ILMN_1235785	002570491	S	2549	GGGGTCCTTTTTACTCACCTTTTCTACTGGTTTTAGACTGTATATAGATT	17	-	24645823-24645872	17qA3.3	Mus musculus Tnf receptor-associated factor 7 (Traf7), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence ISA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	MGC7807; RFWD1	MGC7807; RFWD1
Mus musculus	Riken	ILMN_202357	ILMN_202357	4930484D11RIK	ri|4930484D11|PX00032H11|AK015619|912					AK015619	4930484D11Rik		ILMN_1218381	000380730	S	696	GGCTGTTTCAAGACAGAGCCTGTGAGCTTCAAACTGGATTTGAAATCAGC										
Mus musculus	MEEBO	ILMN_216412	ILMN_216412	4931403M11RIK	scl46557.2.1_111	NM_027621.1			33469010	NM_027621.1	4931403M11Rik		ILMN_2670859	001820348	S	820	CCCTGGACCATCGGTGTGTTTATTATGCATAGCAGGAAGAGCGGTTAACT										
Mus musculus	RefSeq	ILMN_199752	ILMN_199752	LOC386515	XM_359364.1	XM_359364.1			38076813	XM_359364.1	LOC386515		ILMN_2536354	006510414	S	36	GTGCCTGCGGCCAGAATGGATAAAGAGTCAACAGAAGACTGGTGGCCAGC										
Mus musculus	RefSeq	ILMN_242279	ILMN_242279	CNOT2	NM_001037848.2	NM_001037848.2		72068	144922714	NM_001037848.2	Cnot2	NP_001032937.1	ILMN_3162796	006480114	I	661	CGGACTTGTCCTCTTACCTTTTGTCGTTCACTTATGCCACCAACAGTCGC	10	-	115947180-115947229	10qD2	Mus musculus CCR4-NOT transcription complex, subunit 2 (Cnot2), transcript variant 4, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650	AA537049; AA959607; MGC115808; 2810470K03Rik; 2600016M12Rik; AW557563; C79650
Mus musculus	Riken	ILMN_206944	ILMN_206944	D630043K02RIK	ri|D630043K02|PX00197H06|AK085580|3452					AK085580	D630043K02Rik		ILMN_1215404	001240082	S	3078	GGGCCACCAGAAGCCCCATTTTTCCCTGTCCAGAATGACCTGTACTTCCC										
Mus musculus	RefSeq	ILMN_219646	ILMN_219646	CST10	NM_021405.2	NM_021405.2		58214	133892337	NM_021405.2	Cst10	NP_067380.1	ILMN_2711743	002140349	S	685	CACCAAGAGAAAAGTAGAGATAGGCCCTGCACACCTAAGTGACAGTTCCC	2	+	149235910-149235959	2qG3	Mus musculus cystatin 10 (chondrocytes) (Cst10), mRNA.			 [goid 4869] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	DD72	DD72
Mus musculus	Riken	ILMN_206202	ILMN_206202	B930094H08RIK	ri|B930094H08|PX00167G09|AK081159|3077					AK081159	B930094H08Rik		ILMN_2578341	003890091	S	2691	TGGCGTGTGCTGTGCGCGCCTCTCATTGGATGTGCCTATCATCTGGAGAG										
Mus musculus	Riken	ILMN_206360	ILMN_206360	D530018J11RIK	ri|D530018J11|PX00089A14|AK085212|1144					AK085212	D530018J11Rik		ILMN_2579524	002810750	S	927	AGCTGCTAAGTGTCAAGCTTTCCCCTCGCCTGGGACAAGAACAGGATGGG										
Mus musculus	Riken	ILMN_204144	ILMN_204144	C730010J01RIK	ri|C730010J01|PX00086D24|AK050073|1763					AK050073	C730010J01Rik		ILMN_1243483	006220110	S	1297	GCGTCCTTGTATCATAAGAAGTATCAGATGGCGCTGGGCAGTGGTGGCGC										
Mus musculus	RefSeq	ILMN_198155	ILMN_198155	LOC224732	XM_128487.2	XM_128487.2			38082196	XM_128487.2	LOC224732		ILMN_1215280	006580010	S	1122	CATCACTATCCACTCCCATCGGGTGTTGAGTGGCAGCCTGGAGTTCAGCA										
Mus musculus	RefSeq	ILMN_240733	ILMN_240733	ATHL1	NM_145387.2	NM_145387.2		212974	47059094	NM_145387.2	Athl1	NP_663362.2	ILMN_2910684	005390471	S	2766	GTCAGACTGGCGACCAGAGGGAATGGAGTCAGATGGACAGGGTTCCAGGC	7	+	140798769-140798818	7qF5	Mus musculus ATH1, acid trehalase-like 1 (yeast) (Athl1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	5730511L01Rik; BC023151; MGC28193	5730511L01Rik; BC023151; MGC28193
Mus musculus	Riken	ILMN_203547	ILMN_203547	9330137I11RIK	ri|9330137I11|PX00105B12|AK034003|3074					AK034003	9330137I11Rik		ILMN_1212652	004050575	S	2755	CAGGACCCAAACCCAGGAAATGCTGCCACACACTTTAGGCTGGGTCTTCC										
Mus musculus	Riken	ILMN_204568	ILMN_204568	B930025H10RIK	ri|B930025H10|PX00163B02|AK047134|1090					AK047134	B930025H10Rik		ILMN_1243693	005560292	S	800	TGGGCACACCTTAGTCTGAGCTCTCAAGAGACCTGGGATACAGAAGGGAC										
Mus musculus	RefSeq	ILMN_215085	ILMN_215085	FOXL2	NM_012020.1	NM_012020.1		26927	22779927	NM_012020.1	Foxl2	NP_036150.1	ILMN_2655360	003370113	S	566	AGTACCTGCAATCGGGGTTCCTCAACAACTCCTGGCCCCTGCCGCAGCCT	9	+	98856645-98856694	9qE3.3	Mus musculus forkhead box L2 (Foxl2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a granulosa cell, a supporting cell for the developing female gamete in the ovary of mammals [goid 60014] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; The process occurring in the embryo by which the anatomical structures of the post-embryonic eye are generated and organized. Morphogenesis pertains to the creation of form [goid 48048] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; The determination of sex and sexual phenotypes in a female organism's soma [goid 19101] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	PINTO; BPES; Pfrk	PINTO; BPES; Pfrk
Mus musculus	RefSeq	ILMN_199057	ILMN_315623	E530015N03RIK	XM_001476869.1	XM_001476869.1		380650	149261003	XM_001476869.1	E530015N03Rik	XP_001476919.1	ILMN_1224610	006280528	S	1230	TGGCTTTTGGGGAGTGGACCTGGAGCAGGGAAAGGACTCTGTAGCGGACT	10	-	89336305-89336354	10qC2	PREDICTED: Mus musculus RIKEN cDNA E530015N03 gene (E530015N03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_206688	ILMN_315623	E530015N03RIK	XM_001476869.1	XM_001476869.1		380650	149261003	XM_001476869.1	E530015N03Rik	XP_001476919.1	ILMN_1258468	000580441	S	446	GGAAACATCCGGCTTGGGAAAGCGTGTGTGGAATAAATACAGCAGAGGCC	10	-	89337089-89337138	10qC2	PREDICTED: Mus musculus RIKEN cDNA E530015N03 gene (E530015N03Rik), mRNA.					
Mus musculus	Riken	ILMN_203344	ILMN_203344	6030434H13RIK	ri|6030434H13|PX00056P04|AK031451|3057					AK031451	6030434H13Rik		ILMN_1232757	007550168	S	2825	CTCATCACTTGAGAGGCCAAGACTGGAGGATTGCCATGAATTTGGAGGCC										
Mus musculus	RefSeq	ILMN_219380	ILMN_229210	LRP2	XM_899846.2	XM_899846.2		14725	94367009	XM_899846.2	Lrp2	XP_904939.1	ILMN_2708043	006860546	S	4178	GCGTCTTTGACTGTCCCAATGGGACCGATGAGTCCCCGCTTTGCAGTAAG	2	-	69307212-69307261	2qC2	PREDICTED: Mus musculus low density lipoprotein receptor-related protein 2, transcript variant 3 (Lrp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The chemical reactions and pathways involving vitamins. Vitamin is a general term for a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body. Vitamins may be water-soluble or fat-soluble and usually serve as components of coenzyme systems [goid 6766] [evidence IMP]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IMP]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]		
Mus musculus	Riken	ILMN_205654	ILMN_205654	A630047J05RIK	ri|A630047J05|PX00146C19|AK041932|2610					AK041932	A630047J05Rik		ILMN_2574233	001990397	S	2069	GCTTGATTCAAGAGGTTATATAGGGCAGATAACCTTCCCTCCGTCCTTCC										
Mus musculus	RefSeq	ILMN_200769	ILMN_200769	LOC384552	XM_357707.1	XM_357707.1			38085984	XM_357707.1	LOC384552		ILMN_1245285	007040082	S	58	CCAAGTCCACTGGAGATCTTATTGTGTGTTCATCCTACTCCTGCATGCCC										
Mus musculus	Riken	ILMN_204217	ILMN_204217	A730054H24RIK	ri|A730054H24|PX00150J12|AK043083|1445					AK043083	A730054H24Rik		ILMN_2563276	002600719	S	1	GACTGTCGGGTTTCTCCGCGGCTACTGCAGAGGATTCAGATCTGAGTAGC										
Mus musculus	MEEBO	ILMN_189283	ILMN_189283	1700060J05RIK	scl24323.2.1_88						1700060J05Rik		ILMN_1240567	005560546	S	9	TCACCACCTACCATCGGCTTTAGCTCTCGGGCGTCCGCAGCGCCTCCTTT										
Mus musculus	RefSeq	ILMN_187093	ILMN_252539	ORC3L	NM_015824.3	NM_015824.3		50793	141803338	NM_015824.3	Orc3l	NP_056639.2	ILMN_1215091	007150634	S	3622	GGGAAGTCTGCGAGTGTGGCCGCAAGGAAAATGGGAGGATCCAACAGTCC	4	-	34516673-34516722	4qA5	Mus musculus origin recognition complex, subunit 3-like (S. cerevisiae) (Orc3l), mRNA.	A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Orc3	Orc3
Mus musculus	RefSeq	ILMN_188015	ILMN_188015	TLR9	NM_031178.1	NM_031178.1		81897	13626029	NM_031178.1	Tlr9	NP_112455.1	ILMN_2454579	002230358	S	118	TCGAAGGACTCTGCACCCCTTGTCCCTCCTGGTACAGGCTGCAGTGCTGG	9	+	106125854-106125903	9qF1	Mus musculus toll-like receptor 9 (Tlr9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_188015	ILMN_188015	TLR9	NM_031178.1	NM_031178.1		81897	13626029	NM_031178.1	Tlr9	NP_112455.1	ILMN_2849322	003870445	S	3313	TGCTACCAAGCCACCAGGCCCACGGAGCAAAGGTTGGCAGTAAAGGGTAG	9	+	106129049-106129098	9qF1	Mus musculus toll-like receptor 9 (Tlr9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	MEEBO	ILMN_218233	ILMN_218233	A330043L12	scl000831.1_7	XM_136178.3			38073329	XM_136178.3	A330043L12		ILMN_2699281	003990358	S	3938	GGATGGAAGCAGGCCAGAGACGTGAGAGCATCCGAGGACACTTGGAGCAC										
Mus musculus	MEEBO	ILMN_218233	ILMN_218233	A330043L12	scl000831.1_7	XM_136178.3			38073329	XM_136178.3	A330043L12		ILMN_2699275	002570736	S	3931	GACTAGGGGATGGAAGCAGGCCAGAGACGTGAGAGCATCCGAGGACACTT										
Mus musculus	RefSeq	ILMN_217360	ILMN_230074	ARMC6	NM_133972.2	NM_133972.2		76813	113199754	NM_133972.2	Armc6	NP_598733.2	ILMN_2682321	002260593	S	1906	CTGCAGCTTTGGGACAAAGGGCACATGGAACTGCAGTGTTCTGTCTGGAG	8	-	72744334-72744383	8qB3.3	Mus musculus armadillo repeat containing 6 (Armc6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410153K17Rik; MGC67564; AW554412	2410153K17Rik; MGC67564; AW554412
Mus musculus	RefSeq	ILMN_230074	ILMN_230074	ARMC6	NM_133972.2	NM_133972.2		76813	113199754	NM_133972.2	Armc6	NP_598733.2	ILMN_2873469	001510681	S	2068	AGCCAAGGCTGATTCCCCAAGATCCGCATGATGGGAGGAGGGAGGTGTCT	8	-	72744172-72744221	8qB3.3	Mus musculus armadillo repeat containing 6 (Armc6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410153K17Rik; MGC67564; AW554412	2410153K17Rik; MGC67564; AW554412
Mus musculus	RefSeq	ILMN_208616	ILMN_260239	2810409K11RIK	XM_978742.1	XM_978742.1		76373	94381615	XM_978742.1	2810409K11Rik	XP_983836.1	ILMN_2588094	003370176	S	4011	CACTTGTAACTAGAGAGACTGGGGGGTTGAAGTAAGTAGCTGCCTGAGTA				7qA1	PREDICTED: Mus musculus RIKEN cDNA 2810409K11 gene (2810409K11Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_211092	ILMN_310929	LOC100044146	XM_001471897.1	XM_001471897.1		100044146	149233634	XM_001471897.1	LOC100044146	XP_001471947.1	ILMN_2612439	000060296	S	1654	GTAACTTCTTGAAGATTAATCTGTTACTATTTGTTCTAATAAAGATACAG					PREDICTED: Mus musculus hypothetical protein LOC100044146 (LOC100044146), mRNA.					
Mus musculus	MEEBO	ILMN_185089	ILMN_185089	ADCY1	scl41847.14.1_6						Adcy1		ILMN_2424073	001990753	S	16	TGCTGTTCTCATGCACGCTGGCCCTGCACGCCAGGCAAGTGGATGTCAGA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence TAS]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IGI]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence TAS];  [goid 16849] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence IGI]		
Mus musculus	Riken	ILMN_204679	ILMN_204679	A230067E15RIK	ri|A230067E15|PX00129O08|AK038836|2708					AK038836	A230067E15Rik		ILMN_2566822	003840433	S	2414	GTGCAACATGCGGCCCTGTGCCCCCTCACATTATACATACACATGCACAC										
Mus musculus	RefSeq	ILMN_190823	ILMN_232691	FKBP4	NM_010219.3	NM_010219.3		14228	118129940	NM_010219.3	Fkbp4	NP_034349.1	ILMN_1257428	001050670	S	1960	ACCTTGCTCTCCTGAGTTGGTATTCCTGATAACGCCCTCTGGTATCACAG	6	-	128380282-128380331	6qF3	Mus musculus FK506 binding protein 4 (Fkbp4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a steroid hormone receptor complex, an intracellular receptor that binds steroid hormones. The complex is often a dimer, and forms after the steroid has bound the receptor [goid 6463] [evidence IDA]; The establishment of the sex of a male organism by physical differentiation [goid 46661] [evidence IMP]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence IDA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IDA]; Interacting selectively with a glucocorticoid receptor [goid 35259] [evidence IDA]; Interacting selectively with a phosphorylated protein [goid 51219] [evidence IDA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IDA]	AL022792; 59kDa; p59; AW208983; FKPB52; FKBP-52	AL022792; 59kDa; p59; AW208983; FKPB52; FKBP-52
Mus musculus	RefSeq	ILMN_218375	ILMN_218375	SNX17	NM_153680.2	NM_153680.2		266781	118130070	NM_153680.2	Snx17	NP_710147.1	ILMN_2694926	007040392	S	1890	GTGAATGGTCTGAGCAGCTCCCCATCATTAAACTCAGCCTGATTGCCGCC	5	+	31501222-31501271	5qB1	Mus musculus sorting nexin 17 (Snx17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IPI]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	5830447M19Rik; D5Ertd260e; AI790646; mKIAA0064	5830447M19Rik; D5Ertd260e; AI790646; mKIAA0064
Mus musculus	RefSeq	ILMN_218375	ILMN_218375	SNX17	NM_153680.2	NM_153680.2		266781	118130070	NM_153680.2	Snx17	NP_710147.1	ILMN_2733380	003420767	S	181	AATGGAGTCCTGCACTGTCGGGTGCGCTACAGCCAGCTTCTGGGGCTGCA	5	+	31496260-31496309	5qB1	Mus musculus sorting nexin 17 (Snx17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IPI]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	5830447M19Rik; D5Ertd260e; AI790646; mKIAA0064	5830447M19Rik; D5Ertd260e; AI790646; mKIAA0064
Mus musculus	RefSeq	ILMN_215895	ILMN_215895	DNTTIP1	NM_133763.1	NM_133763.1		76233	19526975	NM_133763.1	Dnttip1	NP_598524.1	ILMN_1256348	004920072	S	1158	GTGACTCACTGCAGAGCACCCCAGACTGGCATGTGGTTCTGTTTCTAAAG	2	+	164593633-164593682	2qH3	Mus musculus deoxynucleotidyltransferase, terminal, interacting protein 1 (Dnttip1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [evidence ISO]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISO]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISO]	6430706C13Rik	6430706C13Rik
Mus musculus	RefSeq	ILMN_261854	ILMN_261854	5133401N09RIK	NM_198004.2	NM_198004.2		75731	114205441	NM_198004.2	5133401N09Rik	NP_932121.2	ILMN_3122081	003710470	A	666	GGCAGTGTTTCTCTGTTGACCAGGGTGGTCTGGAATGCAGAGATCTGCCT	13	+	58265214-58265263	13qB1	Mus musculus RIKEN cDNA 5133401N09 gene (5133401N09Rik), transcript variant 1, mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + shikimate = ADP + shikimate 3-phosphate [goid 4765] [evidence IEA]; Catalysis of the reaction: ATP + D-gluconate = ADP + 6-phospho-D-gluconate [goid 46316] [evidence IEA]		
Mus musculus	RefSeq	ILMN_193166	ILMN_250507	ZRANB1	NM_207302.1	NM_207302.1		360216	46409651	NM_207302.1	Zranb1	NP_997185.1	ILMN_1249755	003120228	S	1772	CCATGGAGAACGATGGCTATGGCAACCGAGGTGCTGGTGCTAATCTGAAC	7	+	140174459-140174508	7qF3	Mus musculus zinc finger, RAN-binding domain containing 1 (Zranb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm1956; 9330160G10Rik; Trabid; D7Wsu87e	Gm1956; 9330160G10Rik; Trabid; D7Wsu87e
Mus musculus	RefSeq	ILMN_202188	ILMN_216799	ACTL7B	NM_025271.2	NM_025271.2		11471	146198842	NM_025271.2	Actl7b	NP_079547.2	ILMN_2547689	007510056	S	536	GGAGGGTCGGACACCAGCACCGCATGCTCTTCCGGCATGATCTTCATAGC				4qB3	Mus musculus actin-like 7b (Actl7b), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC151192; Tact1; MGC151194	MGC151192; Tact1; MGC151194
Mus musculus	RefSeq	ILMN_216799	ILMN_216799	ACTL7B	NM_025271.2	NM_025271.2		11471	146198842	NM_025271.2	Actl7b	NP_079547.2	ILMN_2675497	002470097	S	1353	GAGAGCAGAGGCCCCTCTTTGGGCCACTCTATACCTTTACAGAATTTCGC				4qB3	Mus musculus actin-like 7b (Actl7b), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC151192; Tact1; MGC151194	MGC151192; Tact1; MGC151194
Mus musculus	RefSeq	ILMN_215147	ILMN_215147	OLFR1290	NM_146262.2	NM_146262.2		257662	145699130	NM_146262.2	Olfr1290	NP_666374.2	ILMN_2656069	006290358	S	868	AGAAATAAAGAGATGAAAAATGCCATGAAAAGATTTATAAGTAACTACCT				2qE3	Mus musculus olfactory receptor 1290 (Olfr1290), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	GA_x5J8B7W4T2P-84764-83847; MOR248-9	GA_x5J8B7W4T2P-84764-83847; MOR248-9
Mus musculus	RefSeq	ILMN_217696	ILMN_217696	SPSB1	NM_029035.2	NM_029035.2		74646	31541968	NM_029035.2	Spsb1	NP_083311.1	ILMN_1224336	005700066	S	2935	CCGTCACCAGCACCGTAAAGCCTTGTGGCATGTATAGTTCTGAAACCCCC	4	-	149270462-149270511	4qE2	Mus musculus splA/ryanodine receptor domain and SOCS box containing 1 (Spsb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SSB1; MGC102221; SSB-1; AI854583; 4930422J18Rik; AI596360; 1110014L01Rik	SSB1; MGC102221; SSB-1; AI854583; 4930422J18Rik; AI596360; 1110014L01Rik
Mus musculus	Riken	ILMN_206966	ILMN_206966	E330037I15RIK	ri|E330037I15|PX00318L16|AK087890|2206					AK087890	E330037I15Rik		ILMN_2584027	005310653	S	1938	ACAGGTGGGAGAGAGAGACAGTGTAGCCATTTGAGGTGGGAAGAAGCAGC										
Mus musculus	RefSeq	ILMN_214666	ILMN_214666	CCBP2	NM_021609.3	NM_021609.3		59289	142371177	NM_021609.3	Ccbp2	NP_067622.2	ILMN_2650557	003400148	S	2698	GGCCAGCTTTCACCTCACGGGGCCCAATATTCAAATTGTACAGGGGACAA	9	+	121820096-121820145	9qF4	Mus musculus chemokine binding protein 2 (Ccbp2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IDA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	MGC130576; D6; CCR9; Cmkbr9; AI464239; CCR10	MGC130576; D6; CCR9; Cmkbr9; AI464239; CCR10
Mus musculus	RefSeq	ILMN_222171	ILMN_222171	OLFR740	NM_146667.1	NM_146667.1		258661	33239351	NM_146667.1	Olfr740	NP_666878.1	ILMN_2745719	002320091	S	588	CCCATTAATGGAGGTTTTCTGGACAATTATAACATCTCTTATCCTGTTCG	14	+	51073316-51073365	14qC1	Mus musculus olfactory receptor 740 (Olfr740), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR106-4	MOR106-4
Mus musculus	RefSeq	ILMN_216897	ILMN_216897	BCAR3	NM_013867.1	NM_013867.1		29815	7304924	NM_013867.1	Bcar3	NP_038895.1	ILMN_2676615	001190131	S	2908	GGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAG	3	+	122232755-122232804	3qG1	Mus musculus breast cancer anti-estrogen resistance 3 (Bcar3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AND-34; AI131758	AND-34; AI131758
Mus musculus	RefSeq	ILMN_250100	ILMN_250100	ABPB	NM_203502.1	NM_203502.1		233099	45331207	NM_203502.1	Abpb	NP_987098.1	ILMN_2915893	003120653	S	462	GCCCTCATCCTGCAGTCTCTTAGGCTGATTCTAATAAATGCCTGCAGATG	7	-	34796947-34796996	7qB1	Mus musculus androgen binding protein beta (Abpb), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Scgb2b5; C2a	Scgb2b5; C2a
Mus musculus	RefSeq	ILMN_219328	ILMN_219328	IK	NM_011879.1	NM_011879.1		24010	33468954	NM_011879.1	Ik	NP_036009.1	ILMN_2707298	002570019	S	1487	CCTTAGGCCGCTGGGACTTCGATACTCAGGAGGAATACAGCGAGTACATG	18	+	36916218-36916267	18qB2	Mus musculus IK cytokine (Ik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MuRED	MuRED
Mus musculus	Riken	ILMN_206119	ILMN_206119	FBN1	ri|B430214C04|PX00071P14|AK080935|2854					AK080935	Fbn1		ILMN_1252506	000870091	S	2694	AGATAGTAGCCTTCTGTGGCCTTACTGTTAGCTCGGTGAAGATGCTACCG						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins [goid 1527] [evidence TAS]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]		
Mus musculus	RefSeq	ILMN_218082	ILMN_218082	MRPL27	NM_053161.2	NM_053161.2		94064	40254119	NM_053161.2	Mrpl27	NP_444391.1	ILMN_2691298	001440010	S	492	CCCAGGTCACAGGAACAGTGATGATGGAAGTCAAGGGTCTGGGTGAGAAC	11	+	94521163-94521212	11qD	Mus musculus mitochondrial ribosomal protein L27 (Mrpl27), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D18Ertd643e; D11Moh47; A630055F16Rik	D18Ertd643e; D11Moh47; A630055F16Rik
Mus musculus	RefSeq	ILMN_196707	ILMN_229012	LOC634015	XR_003906.1	XR_003906.1		634015	94401087	XR_003906.1	LOC634015		ILMN_2525502	003710142	S	574	ATGCTGAACGTGGTGGACCGGGATGCAGTGTCAGGCATGGGCGTCATCGT					PREDICTED: Mus musculus similar to Proteasome subunit beta type 3 (Proteasome theta chain) (Proteasome chain 13) (Proteasome component C10-II) (LOC634015), mRNA.					
Mus musculus	MEEBO	ILMN_219599	ILMN_219599	IREB2	scl36936.22_183	XM_134910.3			38089837	XM_134910.3	Ireb2		ILMN_1225719	002450243	S	5185	TTAAGGTTCCCAAGATGGCAGGTACCTCTGTTAATACTTGGATGAGAGGC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISO]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISO]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; Any process of regulating the production and elimination of erythrocytes within an organism [goid 34101] [evidence IMP]; The chemical reactions and pathways resulting in the formation of protoporphyrinogen IX [goid 6782] [evidence IMP]; Any process by which nutrients are taken up from the contents of the intestine [goid 50892] [evidence IGI]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IGI]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IGI]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IDA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IGI]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]	Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with the iron-responsive element, a regulatory sequence found in the 5'- and 3'-untranslated regions of mRNAs encoding many iron-binding proteins [goid 30350] [evidence IDA]; Antagonizes ribosome-mediated translation of mRNA into a polypeptide [goid 30371] [evidence TAS]; Interacting selectively with the iron-responsive element, a regulatory sequence found in the 5'- and 3'-untranslated regions of mRNAs encoding many iron-binding proteins [goid 30350] [evidence IDA]		
Mus musculus	Riken	ILMN_201648	ILMN_201648	1110049N09RIK	ri|1110049N09|R000018C18|AK004213|831					AK004213	1110049N09Rik		ILMN_2543459	002570014	S	250	CCTGAGCTGGAGGGGTCTTGAGGTTCCCTGGTTCTAGCCTTTCACTTTGC										
Mus musculus	MEEBO	ILMN_193218	ILMN_193218	D5ERTD505E	scl10074.1.1_80						D5Ertd505e		ILMN_2495121	000730438	S	19	GCAAGAGGAATGGTGGTGGAAAAGGATGGCAGAAGCAACAGCTAGTAGTC										
Mus musculus	RefSeq	ILMN_209460	ILMN_209460	GRN	NM_008175.3	NM_008175.3		14824	142357784	NM_008175.3	Grn	NP_032201.1	ILMN_2595973	002000246	S	1925	CCTGAGTCACCCTATCACCATGGGAGGTGGAGCCTCAAACTAAAACCTTC	11	+	102297900-102297949	11qD	Mus musculus granulin (Grn), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IDA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IDA]; The hatching of the cellular blastocyst from the zona pellucida [goid 1835] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	epithelin	epithelin
Mus musculus	RefSeq	ILMN_218292	ILMN_218292	BC050092	NM_181419.2	NM_181419.2		235048	31340882	NM_181419.2	BC050092	NP_852084.1	ILMN_2694022	001340719	S	3188	GGCAGTTTGAATAGCTATGGCCCCATTGTCAATGGCCTGAAAACCTTTTG	9	-	22052210-22052259	9qA3	Mus musculus cDNA sequence BC050092 (BC050092), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC60727; 6720416P20	MGC60727; 6720416P20
Mus musculus	RefSeq	ILMN_200079	ILMN_200079	LOC385719	XM_358923.1	XM_358923.1			38080250	XM_358923.1	LOC385719		ILMN_1226974	005260338	S	276	CATCATCGAGACACTCCCACTAAGAATTACGGAAGTAGGGCACCCCCTGG										
Mus musculus	RefSeq	ILMN_197687	ILMN_233189	381484	NM_001081687.1	NM_001081687.1		381484	126157463	NM_001081687.1	381484	NP_001075156.1	ILMN_1222860	003130400	S	547	GGGGCCCATGAGGTGGTACCGAGGTGTAGGACACAGGAGAAACTTGATAT	3	-	15863519-15863568	3qA1	Mus musculus predicted gene, 381484 (381484), mRNA.					
Mus musculus	Riken	ILMN_203646	ILMN_203646	9330199F12RIK	ri|9330199F12|PX00107H15|AK034486|4337					AK034486	9330199F12Rik		ILMN_2558889	003780039	S	3503	ACTGCATAGCAGGTACAATGGAAAAACTCAAGGGCAGAACACTGCTGGGG										
Mus musculus	RefSeq	ILMN_220571	ILMN_220571	MMP14	NM_008608.2	NM_008608.2		17387	31982190	NM_008608.2	Mmp14	NP_032634.2	ILMN_1240726	003520066	S	2402	CCCTATATGTACCAAGTGTACCTAGTTGGCTGCCTCCCGCCACTCTGACT	14	+	55059915-55059964	14qC2	Mus musculus matrix metallopeptidase 14 (membrane-inserted) (Mmp14), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IMP]; The proteolytic processing of an inactive enzyme to an active form [goid 31638] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AI325305; MT-MMP-1; MT1-MMP	AI325305; MT-MMP-1; MT1-MMP
Mus musculus	RefSeq	ILMN_213067	ILMN_213067	MALL	NM_145532.3	NM_145532.3		228576	141802823	NM_145532.3	Mall	NP_663507.1	ILMN_1224279	005220041	S	1641	CCCCTGCACGCCAAGGGTCCTTACCCGACAGTCCAACCATCTAAATAATT	2	-	127530402-127530451	2qF1	Mus musculus mal, T-cell differentiation protein-like (Mall), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC19097; BC012256; BENE	MGC19097; BC012256; BENE
Mus musculus	MEEBO	ILMN_223792	ILMN_223792	OLFR1303	scl0258397.1_330				33238979	NM_146402	Olfr1303		ILMN_2769233	006400286	S	879	GATGAAGGTAGTAATAAGGAGAGTTTTCAAAACATTATTAACCTTTAGAG						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_214346	ILMN_214346	ATP6V1D	NM_023721.2	NM_023721.2		73834	80861456	NM_023721.2	Atp6v1d	NP_076210.1	ILMN_2647048	001500608	S	1194	GTACTATAAACATTCATGGTCGCAGGCAAAGGCTGTGAGCAACCTTCCTT	12	-	79944135-79944184	12qC3	Mus musculus ATPase, H+ transporting, lysosomal V1 subunit D (Atp6v1d), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]	Atp6m; VATD; Vma8; 1110004P10Rik	Atp6m; VATD; Vma8; 1110004P10Rik
Mus musculus	RefSeq	ILMN_213051	ILMN_213051	EIF4EBP1	NM_007918.3	NM_007918.3		13685	122937367	NM_007918.3	Eif4ebp1	NP_031944.3	ILMN_2670398	000240615	S	770	GGCTGGGTTACCTGGGAAAGCCACACTTTTACTTCTTTCCCTGACAGGAA	8	+	28385917-28385966	8qA2	Mus musculus eukaryotic translation initiation factor 4E binding protein 1 (Eif4ebp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IC ]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IDA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of translational initiation [goid 45947] [evidence IDA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation [goid 8190] [evidence IPI]; Antagonizes ribosome-mediated translation of mRNA into a polypeptide [goid 30371] [evidence TAS]	PHAS-I; AA959816	PHAS-I; AA959816
Mus musculus	RefSeq	ILMN_221654	ILMN_221654	GFRA4	NM_020014.1	NM_020014.1		14588	9910239	NM_020014.1	Gfra4	NP_064398.1	ILMN_2738522	000460577	S	620	GTGGAAACCGGCGCGAAGAATGCGAAGCCTTCCGCAAGCTCTTTACAAGG	2	-	130866764-130866813	2qF1	Mus musculus glial cell line derived neurotrophic factor family receptor alpha 4 (Gfra4), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [evidence TAS]	AW060733; G630015H18Rik	AW060733; G630015H18Rik
Mus musculus	RefSeq	ILMN_213944	ILMN_213944	MXD3	NM_016662.4	NM_016662.4		17121	142372266	NM_016662.4	Mxd3	NP_057871.2	ILMN_2642571	000130437	S	611	AAACAGAGCTCCTACAGAGCTTCAGCGCTGGGCGGGAGCACAGCTACTCA	13	-	55427167-55427216	13qB1	Mus musculus Max dimerization protein 3 (Mxd3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IGI]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	4631412E13Rik; Mad3	4631412E13Rik; Mad3
Mus musculus	MEEBO	ILMN_215684	ILMN_215684	SUMO3	scl0020610.2_127	NM_019929.1			9910555	NM_019929.1	Sumo3		ILMN_2776230	002350564	S	424	GCAGAAGCCAGAGTCACCGAAGGATTCTCCTTTTCCGACGCGCTTGGAGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IDA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IDA]		
Mus musculus	Riken	ILMN_203374	ILMN_203374	PITX2	ri|9430085M16|PX00110H02|AK035083|1494					AK035083	Pitx2		ILMN_1238663	000150484	S	1206	GCAAGAGTTGCTCGCTGGTCTTTACCGGGGCGGGTTTTTCAGCCATTCAG						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISO]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure [goid 31076] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IMP]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IMP]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISO]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IDA]; The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle [goid 2074] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISO]		
Mus musculus	RefSeq	ILMN_201472	ILMN_256448	LOC630420	XM_903566.1	XM_903566.1		630420	82954788	XM_903566.1	LOC630420	XP_908659.1	ILMN_2542420	001780347	S	130	TATGAAACCAAACAGTACCCAACCCTGTTCTGGTATGTGCAGTATCCCGG	14	+	53416082-53416131		PREDICTED: Mus musculus similar to TRAV6D-5 (LOC630420), mRNA.					
Mus musculus	RefSeq	ILMN_199028	ILMN_229266	LOC215996	XR_002594.1	XR_002594.1		215996	94389269	XR_002594.1	LOC215996		ILMN_1215814	005560274	S	2438	ACTGTGCTGCCTAGGCTCTGTCGTGACAGGAAAACCTCCACTCTCTGGGG					PREDICTED: Mus musculus hypothetical LOC215996 (LOC215996), mRNA.					
Mus musculus	RefSeq	ILMN_200120	ILMN_200120	LOC384224	XM_357501.1	XM_357501.1			38080494	XM_357501.1	LOC384224		ILMN_1248919	001780672	S	377	TCAGCATGGACAAGTACCCCGCACAGGAGCAGTGCAAGCAGGCACAAACC										
Mus musculus	RefSeq	ILMN_215168	ILMN_215168	BC057371	NM_177572.3	NM_177572.3		194237	40254318	NM_177572.3	BC057371	NP_808240.2	ILMN_2879196	005090653	S	3935	GGGGGTGTGTGTGGTCTTTCCACTGTCTTGTAGCAACATCTTGAAACTGG	4	-	119137951-119138000	4qD2.1	Mus musculus cDNA sequence BC057371 (BC057371), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	RP23-132L14.2; B930030J24	RP23-132L14.2; B930030J24
Mus musculus	RefSeq	ILMN_215168	ILMN_215168	BC057371	NM_177572.3	NM_177572.3		194237	40254318	NM_177572.3	BC057371	NP_808240.2	ILMN_2676745	000020463	S	2963	CAGTCTCACCCCTGGGTGCATGCCACTAAACTGTAATCTGAGTGTGTGTC	4	-	119138923-119138972	4qD2.1	Mus musculus cDNA sequence BC057371 (BC057371), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	RP23-132L14.2; B930030J24	RP23-132L14.2; B930030J24
Mus musculus	RefSeq	ILMN_215168	ILMN_215168	BC057371	NM_177572.3	NM_177572.3		194237	40254318	NM_177572.3	BC057371	NP_808240.2	ILMN_2879195	002680133	S	3853	GGAACCTTCTAGAGGCCCTGCATAACCTGAAACCCTGACTCGTGTACGCC	4	-	119138033-119138082	4qD2.1	Mus musculus cDNA sequence BC057371 (BC057371), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	RP23-132L14.2; B930030J24	RP23-132L14.2; B930030J24
Mus musculus	RefSeq	ILMN_198608	ILMN_198608	LOC236866	XM_141846.2	XM_141846.2			38086421	XM_141846.2	LOC236866		ILMN_1224140	004070609	S	416	CCCGGGCACTCTGTCTGCAGATGTTGGCTCTGGCATGCATCAGTGGTTTT										
Mus musculus	RefSeq	ILMN_213172	ILMN_250654	ERBB2IP	NM_001005868.1	NM_001005868.1		59079	54607113	NM_001005868.1	Erbb2ip	NP_001005868.1	ILMN_1244790	005860575	S	6047	GAAGTAATGCATGGCTATTTGGACTGAGAAAAGTGCCATAGGAGACCAGC	13	-	104609361-104609410	13qD1	Mus musculus Erbb2 interacting protein (Erbb2ip), transcript variant 1, mRNA.	The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Erbin; 1700028E05Rik; mKIAA1225	Erbin; 1700028E05Rik; mKIAA1225
Mus musculus	RefSeq	ILMN_221021	ILMN_221021	DVL2	NM_007888.3	NM_007888.3		13543	87299587	NM_007888.3	Dvl2	NP_031914.3	ILMN_1243340	002190059	S	2207	CTATGGAGCCCCATCTGGCATGGCTCTCCCCTATAACCCCATGATGGTAG	11	+	69819811-69819860	11qB3	Mus musculus dishevelled 2, dsh homolog (Drosophila) (Dvl2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IMP]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_216828	ILMN_216828	ARHGDIB	NM_007486.3	NM_007486.3		11857	145966894	NM_007486.3	Arhgdib	NP_031512.1	ILMN_1213604	001230452	S	352	GGCCCTCAAAAAGGATACATTTGTGCTAAAGGAAGGCATTGAATACAGGG				6qG1	Mus musculus Rho, GDP dissociation inhibitor (GDI) beta (Arhgdib), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]	Ly-GDI; Gdid4; D4	Ly-GDI; Gdid4; D4
Mus musculus	RefSeq	ILMN_249512	ILMN_249512	GLIS3	NM_175459.4	NM_175459.4		226075	113866025	NM_175459.4	Glis3	NP_780668.3	ILMN_2838605	004560605	S	3289	GAATCTCTTCGCAGTGGCCCTGAAGACCCCACGTTCTTGCAGCTCAGTGC				19qC1	Mus musculus GLIS family zinc finger 3 (Glis3), mRNA.	Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated [goid 44428] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E230012L24; E330013K21Rik; 4833409N03Rik	E230012L24; E330013K21Rik; 4833409N03Rik
Mus musculus	MEEBO	ILMN_188455	ILMN_188455	ALDH5A1	scl44975.2_430				27369747	NM_172532	Aldh5a1		ILMN_1216770	002370209	S	17	GCTGGGCTGGTTGTACTCTTAGACCACTTGTCTACTTCTGTCTGGGTTGA						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue [goid 6650] [evidence IMP]; The chemical reactions and pathways involving fatty acids with a chain length of less than 8 carbons [goid 46459] [evidence IMP]; The chemical reactions and pathways involving galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6681] [evidence IMP]; The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative [goid 6678] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; The chemical reactions and pathways involving acetate, the anion of acetic acid [goid 6083] [evidence IMP]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [evidence IMP]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IMP]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle [goid 6105] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IMP]; The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9448] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9450] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP [goid 16620] [evidence IEA]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [evidence IEA]		
Mus musculus	MEEBO	ILMN_188455	ILMN_188455	ALDH5A1	scl44975.2_430				27369747	NM_172532	Aldh5a1		ILMN_2490536	002490717	S	14	CAAATTGGATCCCGTGGCTTGTCCTCTCTGAAGGCCGGAGCCCAGTGTTT						A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue [goid 6650] [evidence IMP]; The chemical reactions and pathways involving fatty acids with a chain length of less than 8 carbons [goid 46459] [evidence IMP]; The chemical reactions and pathways involving galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6681] [evidence IMP]; The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative [goid 6678] [evidence IMP]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; The chemical reactions and pathways involving acetate, the anion of acetic acid [goid 6083] [evidence IMP]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [evidence IMP]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IMP]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IMP]; The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle [goid 6105] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence IMP]; The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9448] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9450] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP [goid 16620] [evidence IEA]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195572	ILMN_195572	WDR6	NM_031392.2	NM_031392.2		83669	31981423	NM_031392.2	Wdr6	NP_113569.1	ILMN_3162081	006510546	S	3570	TCTCGCAAGTATTCCAGTAGGGTGTTGCATAGGAGGACCAAGAACACGCC	9	-	108475116-108475165	9qF2	Mus musculus WD repeat domain 6 (Wdr6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_207259	ILMN_207259	IHH	ri|G630005N21|PL00012H06|AK090147|1391					AK090147	Ihh		ILMN_2586246	006550102	S	1320	ATCTCCTCCCCAGAGCCCCAAAGCTGGACATTTTGGAGGTAAATGGACTC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The removal of an internal amino acid sequence (an intein) from a protein during protein maturation; the excision of inteins is precise and the N- and C-terminal exteins are joined by a normal peptide bond. Protein splicing involves 4 nucleophilic displacements by the 3 conserved splice junction residues [goid 16539] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221767	ILMN_221767	OLFR1497	NM_146741.1	NM_146741.1		258736	22129358	NM_146741.1	Olfr1497	NP_666952.1	ILMN_2740038	004290626	S	668	GGCCATTATGCAAATCCGCTCAGCTGGAGGCCGAGCCAAAACTTTCTCTA	19	-	13869382-13869431	19qA	Mus musculus olfactory receptor 1497 (Olfr1497), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR212-1	MOR212-1
Mus musculus	RefSeq	ILMN_196359	ILMN_196359	5430414B19RIK	NM_183100.1	NM_183100.1			34147082	NM_183100.1	5430414B19Rik		ILMN_2523817	001850161	S	61	CCGTGTCTTGCCTTACTAGTCATCTGTTGGTGGACACATGTATTGCTTTC										
Mus musculus	MEEBO	ILMN_193174	ILMN_193174	C130039E17RIK	scl00319993.1_165						C130039E17Rik		ILMN_2494727	004210100	S	2	GTGGTTGGCAAGAACCAGAAAACCCTCACACACAACGGGTAAGTACATGA										
Mus musculus	MEEBO	ILMN_192096	ILMN_192096	OLFR70	scl24393.2_36				11464982	NM_019485	Olfr70		ILMN_2484965	002570750	S	10	GCTTCCAAGAGTTTCCCTCTGGTTAGGAGTTGCCCATGAGAAACATGCAC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence TAS]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_196230	ILMN_228762	INTS12	NM_027927.3	NM_027927.3		71793	55742883	NM_027927.3	Ints12	NP_082203.1	ILMN_2522765	006200519	S	2508	CTCCTCTGAACTCTTGCCGTGATGTGATCCTATATACATGGTCCAAGCCA	3	+	132773472-132773521	3qG3	Mus musculus integrator complex subunit 12 (Ints12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	1110020M19Rik; 4930529N21Rik; Phf22; 2810027J24Rik; A230056J18Rik; AI666778	1110020M19Rik; 4930529N21Rik; Phf22; 2810027J24Rik; A230056J18Rik; AI666778
Mus musculus	RefSeq	ILMN_220311	ILMN_227548	CRISP4	NM_030033.1	NM_030033.1		78081	88595370	NM_030033.1	Crisp4	NP_084309.1	ILMN_1254579	005080397	S	388	TGGAGAATGGCCATCCACAGATGATGACATCGAAACTGATCACTACACTC	1	-	18118724-18118773	1qA3	Mus musculus cysteine-rich secretory protein 4 (Crisp4), mRNA.				9230112K08Rik	9230112K08Rik
Mus musculus	RefSeq	ILMN_227548	ILMN_227548	CRISP4	NM_030033.1	NM_030033.1		78081	88595370	NM_030033.1	Crisp4	NP_084309.1	ILMN_2910714	000940193	S	588	GTGACGATTGTCCAAATAACTGCGAAGATGGACTGTGCACTAACCCCTGC	1	-	18105826-18105837:18112819-18112856	1qA3	Mus musculus cysteine-rich secretory protein 4 (Crisp4), mRNA.				9230112K08Rik	9230112K08Rik
Mus musculus	RefSeq	ILMN_186974	ILMN_227548	CRISP4	NM_030033.1	NM_030033.1		78081	88595370	NM_030033.1	Crisp4	NP_084309.1	ILMN_2440083	000580328	S	575	GAGGGCTCACCATGTGACGATTGTCCAAATAACTGCGAAGATGGACTGTG	1	-	18112820-18112869	1qA3	Mus musculus cysteine-rich secretory protein 4 (Crisp4), mRNA.				9230112K08Rik	9230112K08Rik
Mus musculus	Riken	ILMN_201939	ILMN_201939	9030409G11RIK	ri|9030409G11|PX00025G07|AK018497|1862					AK018497	9030409G11Rik		ILMN_1220966	006980070	S	1591	CCTGGAACAGGCAGAAACACAAATGTGACCCCACACCCCCTCCGGGTTGT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence ISA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence ISA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]			
Mus musculus	MEEBO	ILMN_221805	ILMN_221805	D430013K02	scl18164.6_672				51704834	XM_484831	D430013K02		ILMN_2740558	005560719	S	2323	GGCAGACCCTTCACACTGCTTTACTCTTCTGTGTTCACCAGCCTCACTAA										
Mus musculus	RefSeq	ILMN_192506	ILMN_192506	ZFP53	NM_013843.3	NM_013843.3		24132	113680995	NM_013843.3	Zfp53	NP_038871.1	ILMN_2488717	001450603	S	2289	TTAAAAATCACAACAGTATAAATAATAGAAACATAAAAATAACAGGCTTT	17	+	21646651-21646700	17qA3.2	Mus musculus zinc finger protein 53 (Zfp53), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	D030067O06Rik; KRAZ1; Zfp-53; zfas8; Zfp118	D030067O06Rik; KRAZ1; Zfp-53; zfas8; Zfp118
Mus musculus	RefSeq	ILMN_208866	ILMN_208866	GBA	NM_008094.4	NM_008094.4		14466	118130967	NM_008094.4	Gba	NP_032120.1	ILMN_1234545	000070070	S	208	GAAAAGAGTGAAGAGAGTCTTCTTTGGAGTGGGCAGCAAACTCCCTAGCA	3	+	89007174-89007223	3qF1	Mus musculus glucosidase, beta, acid (Gba), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine [goid 4348] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GC; GBA1; GLUC; GCase	GC; GBA1; GLUC; GCase
Mus musculus	RefSeq	ILMN_215199	ILMN_215199	FKBP8	NM_010223.1	NM_010223.1		14232	6857786	NM_010223.1	Fkbp8	NP_034353.1	ILMN_2656677	006650356	S	1360	AGTTTTCCCTCTCAGTAGGCCTGGGGCAGCACTACCATTCCTTCCTGCCC	8	+	73059116-73059165	8qB3.3	Mus musculus FK506 binding protein 8 (Fkbp8), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IDA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IDA]	The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]	Fkbp38; 38kDa	Fkbp38; 38kDa
Mus musculus	RefSeq	ILMN_218580	ILMN_314134	MDC1	NM_001010833.2	NM_001010833.2		240087	132626692	NM_001010833.2	Mdc1	NP_001010833.2	ILMN_1219955	000160523	S	2656	GAGACAGTCAGAGAAAAGAGGCTGACAAGGATCTTGAAGGGAATAGGGAG	17	+	35987612-35987661	17qB1	Mus musculus mediator of DNA damage checkpoint 1 (Mdc1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		Nfbd1; 6820401C03; AA413496; mKIAA0170	Nfbd1; 6820401C03; AA413496; mKIAA0170
Mus musculus	RefSeq	ILMN_209151	ILMN_209151	C1QTNF3	NM_030888.3	NM_030888.3		81799	142366188	NM_030888.3	C1qtnf3	NP_112150.1	ILMN_2593034	005260672	S	1655	CTGGGGCTGTGGTAGAGCTCTCTTGACTCTGTACAACAAGCTGAGGTAAG	15	+	10909246-10909295	15qA1	Mus musculus C1q and tumor necrosis factor related protein 3 (C1qtnf3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CTRP3; Cors; AI315029; Corcs; CORS-26; 2310005P21Rik	CTRP3; Cors; AI315029; Corcs; CORS-26; 2310005P21Rik
Mus musculus	RefSeq	ILMN_209151	ILMN_209151	C1QTNF3	NM_030888.3	NM_030888.3		81799	142366188	NM_030888.3	C1qtnf3	NP_112150.1	ILMN_2760318	004780180	S	610	AGCATGAGGACGTAGAGGAAGTGTATGTGTACCTTATGCACAACGGCAAC	15	+	10905376-10905425	15qA1	Mus musculus C1q and tumor necrosis factor related protein 3 (C1qtnf3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CTRP3; Cors; AI315029; Corcs; CORS-26; 2310005P21Rik	CTRP3; Cors; AI315029; Corcs; CORS-26; 2310005P21Rik
Mus musculus	Riken	ILMN_202684	ILMN_202684	A430106P18RIK	ri|A430106P18|PX00064J18|AK020778|1154					AK020778	A430106P18Rik		ILMN_1212772	006960470	S	772	GGGGAGATGTGGGAACACGGTCCAAGAATGGAGTGTGTAGATTTTCTGAG										
Mus musculus	RefSeq	ILMN_213439	ILMN_213439	1110019N10RIK	NM_026753.2	NM_026753.2		68523	142360665	NM_026753.2	1110019N10Rik	NP_081029.1	ILMN_2637066	000780041	S	116	GCCAGTGACGGCGGGCGAGGAAGATGAGGAAGTGCCGGACAGCATCGACG	8	-	107165463-107165512	8qD3	Mus musculus RIKEN cDNA 1110019N10 gene (1110019N10Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_193115	ILMN_193115	VDAC2	NM_011695.2	NM_011695.2		22334	118130063	NM_011695.2	Vdac2	NP_035825.1	ILMN_2494244	002000121	S	1102	CCTTCCCCCAGAAGGTGATCACATCAAAGGATGATGAAGCAAGAGCTGTA	14	+	22664541-22664590	14qA3	Mus musculus voltage-dependent anion channel 2 (Vdac2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Catalysis of the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion [goid 8308] [evidence IEA]	Vdac6	Vdac6
Mus musculus	Riken	ILMN_203539	ILMN_203539	HAS1	ri|E130302P16|PX00092L12|AK053726|3542					AK053726	Has1		ILMN_1228419	005340521	S	3423	GGAAGAGACAAGGTAGGTGGGTTGAGTGACCTGTACCAAGGAAACCAAGC						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-D-glucuronate + UDP-N-acetyl-D-glucosamine = [beta-N-acetyl-D-glucosaminyl(1,4)beta-D-glucuronosyl(1,3)](n) + 2n UDP [goid 50501] [evidence IEA]		
Mus musculus	RefSeq	ILMN_201989	ILMN_196507	2310022K01RIK	XM_355883.6	XM_355883.6		71909	149256499	XM_355883.6	2310022K01Rik	XP_355883.3	ILMN_1242680	002630154	S	1556	TGCCTGTGGGGAAAGCATCTGAACTACTGCTTCCAAGGGCTGCTTCTCTC	7	-	31442061-31442097:31442181-31442193	7qB1	PREDICTED: Mus musculus RIKEN cDNA 2310022K01 gene, transcript variant 1 (2310022K01Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196507	ILMN_196507	2310022K01RIK	XM_355883.6	XM_355883.6		71909	149256499	XM_355883.6	2310022K01Rik	XP_355883.3	ILMN_1235574	006940435	S	1824	TCAGGACTGGTGGGAACAGCCGAGCCAAGCTGCCCTCCCTGAGGAGATCT	7	-	31439033-31439074:31439189-31439196	7qB1	PREDICTED: Mus musculus RIKEN cDNA 2310022K01 gene, transcript variant 1 (2310022K01Rik), mRNA.					
Mus musculus	Riken	ILMN_203428	ILMN_203428	C330018C16RIK	ri|C330018C16|PX00076F07|AK049267|2687					AK049267	C330018C16Rik		ILMN_2557228	005900373	S	2441	TGAATCAGGGACGAGACGGACAGGCGTGAATGCAGGGGAGGCCAGAGTAT										
Mus musculus	Riken	ILMN_203743	ILMN_203743	9930020B22RIK	ri|9930020B22|PX00119N03|AK036865|2598					AK036865	9930020B22Rik		ILMN_1240787	002680333	S	2416	GGACTTGGTGAAGCCTTGTGCAGATACTGTGCATACACCTTCAGTCTCTG										
Mus musculus	RefSeq	ILMN_211872	ILMN_239011	IL1F8	NM_027163.4	NM_027163.4		69677	153791705	NM_027163.4	Il1f8	NP_081439.1	ILMN_1248835	004830025	S	450	GCCTTTCTGTTCTATCATGGCATAGAGGGCTCCACTTCTGTCTTTCAGTC				2qA3	Mus musculus interleukin 1 family, member 8 (Il1f8), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]	2310043N20Rik	2310043N20Rik
Mus musculus	RefSeq	ILMN_210967	ILMN_210967	2310057J18RIK	NM_026336.2	NM_026336.2		67719	141801966	NM_026336.2	2310057J18Rik	NP_080612.1	ILMN_1220128	000240180	S	1053	CAACTGCCTTTGACCACAAGCAATTGAAAACAATGGCTATGATTACAATC	10	-	28692307-28692356	10qA4	Mus musculus RIKEN cDNA 2310057J18 gene (2310057J18Rik), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			2210414P04Rik	2210414P04Rik
Mus musculus	RefSeq	ILMN_210292	ILMN_210292	OLFR77	NM_146339.2	NM_146339.2		258336	34328370	NM_146339.2	Olfr77	NP_666451.1	ILMN_2604160	006520364	S	2455	GAACAGAATAATTACATGAAGGTGTATCAGAATATATATTGTCTACTAGA	9	+	19726738-19726787	9qA3	Mus musculus olfactory receptor 77 (Olfr77), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence TAS]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	18A; MOR143-1	18A; MOR143-1
Mus musculus	MEEBO	ILMN_223406	ILMN_223406	OLFR173	scl00259002.1_48				22128938	NM_147000	Olfr173		ILMN_2763664	005310019	S	219	GCCTGTGCTATTACCCCTAAAATGTTGGAGAACTTTTTTTCTGAGGACAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]		
Mus musculus	RefSeq	ILMN_190439	ILMN_245979	RNF222	NM_177060.3	NM_177060.3		320040	116089299	NM_177060.3	Rnf222	NP_796034.2	ILMN_1231852	005360100	S	2463	GACAAAAGGAACTTTGCAGACTTGTGAGTCTGTGTCCACCCCAGCCAGGC	11	+	68708279-68708328	11qB3	Mus musculus ring finger protein 222 (Rnf222), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP23-396M19.3	RP23-396M19.3
Mus musculus	RefSeq	ILMN_198650	ILMN_198650	LOC233184	XM_145565.3	XM_145565.3			38086666	XM_145565.3	LOC233184		ILMN_1227383	004860487	S	981	CTCAGATGGAGCACCCTCCATGACCTGGTGCTCAGGAGACTCAGAGGGCT										
Mus musculus	MEEBO	ILMN_212520	ILMN_212520	LRRC2	scl074249.12_276	XM_135172.3			38090134	XM_135172.3	Lrrc2		ILMN_2627400	001230398	S	3464	ATCAAGATTTGAAAACTAAAATGTGAAAAGATGGAAGGGTAGAATTTCAT								Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_199034	ILMN_199034	LOC216081	XM_137149.2	XM_137149.2			38090530	XM_137149.2	LOC216081		ILMN_2533811	001820458	S	966	GGGGGCTCAGGTTATGTGGTCATCTCTTCCACTGCCCACTGGTCTTGGCT										
Mus musculus	RefSeq	ILMN_196903	ILMN_196903	LOC381255	XM_355197.1	XM_355197.1			38049492	XM_355197.1	LOC381255		ILMN_1260243	006110576	S	3317	CTCTCCTGTTCACAGTGCACGTGCCTGGGGGGCTGAGAGTTAGGATTCAA										
Mus musculus	MEEBO	ILMN_209522	ILMN_209522	CLIC1	scl50794.7.1_43	NM_033444.1			15617202	NM_033444.1	Clic1		ILMN_2596611	005570400	S	850	CGGGAAGAATTTGCCTCCACCTGTCCAGATGATGAAGAGATAGAGCTAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence ISO]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence ISO]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200462	ILMN_200462	LOC381729	XM_355706.1	XM_355706.1			38082248	XM_355706.1	LOC381729		ILMN_2538843	004210255	S	101	CCCAAGCCCCACAAAGGAGATATGGGAAGTGTGCTGTAGTGTTTCAGAAG										
Mus musculus	RefSeq	ILMN_193770	ILMN_232357	CCNG1	NM_009831.2	NM_009831.2		12450	70906458	NM_009831.2	Ccng1	NP_033961.1	ILMN_2702233	003830136	S	1061	CCTAACGGTCAGAAGTTGAAATGGATTGTGTCTGGACGCACTGCACGGCA	11	-	40564430-40564479	11qA5	Mus musculus cyclin G1 (Ccng1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		AI314029	AI314029
Mus musculus	RefSeq	ILMN_193770	ILMN_232357	CCNG1	NM_009831.2	NM_009831.2		12450	70906458	NM_009831.2	Ccng1	NP_033961.1	ILMN_2710229	001410204	S	880	GCCTTCTGTGCTGGCGCTATCTATCCTTGCGTTGGAGATCCAAGCACTGA	11	-	40564812-40564861	11qA5	Mus musculus cyclin G1 (Ccng1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		AI314029	AI314029
Mus musculus	RefSeq	ILMN_193770	ILMN_232357	CCNG1	NM_009831.2	NM_009831.2		12450	70906458	NM_009831.2	Ccng1	NP_033961.1	ILMN_2500276	003710014	S	3203	AGCTCAGGGCCCTGGACAGCCTGAGTCAACCTAGAGTAGCTGGAACCATT	11	-	40562288-40562337	11qA5	Mus musculus cyclin G1 (Ccng1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		AI314029	AI314029
Mus musculus	RefSeq	ILMN_250798	ILMN_250798	SLC39A12	NM_001012305.1	NM_001012305.1		277468	59858550	NM_001012305.1	Slc39a12	NP_001012305.1	ILMN_2933805	004200343	S	2145	GACCCTGGATGACGTTTCTCCTGCAGAATGTCGGATTGGTCCTTGGCTGG	2	+	14416079-14416128	2qA2	Mus musculus solute carrier family 39 (zinc transporter), member 12 (Slc39a12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	Gm731; AW046938; MGC102235	Gm731; AW046938; MGC102235
Mus musculus	RefSeq	ILMN_219140	ILMN_219140	SVA	NM_009299.1	NM_009299.1		20939	6678186	NM_009299.1	Sva	NP_033325.1	ILMN_2704786	001990768	S	507	CTGGAAGGTTGCAATAGAACCACATCACTAACGTACTCTTGGAGAGGATT	6	+	41992706-41992755	6qB2.1	Mus musculus seminal vesicle antigen (Sva), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence TAS]			MGC129252; MGC129253	MGC129252; MGC129253
Mus musculus	RefSeq	ILMN_231961	ILMN_231961	TCL1B3	NM_013772.1	NM_013772.1		27378	7305556	NM_013772.1	Tcl1b3	NP_038800.1	ILMN_2921240	004150070	S	836	CTGAGCCATCACTGGCAAGAAGTTCGACTGGTGCTGGGTAGAGGCCACTC	12	+	106433613-106433662	12qE	Mus musculus T-cell leukemia/lymphoma 1B, 3 (Tcl1b3), mRNA.					
Mus musculus	RefSeq	ILMN_219915	ILMN_219915	ITGAV	NM_008402.1	NM_008402.1		16410	6680485	NM_008402.1	Itgav	NP_032428.1	ILMN_1238119	007330360	S	3661	CCTCTTCAGTTACTGTTCCTAATTGACTGTGTGGGGTTTCTCTCTTCGGC	2	+	83643798-83643847	2qD	Mus musculus integrin alpha V (Itgav), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IMP]; The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte [goid 43277] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	1110004F14Rik; 2610028E01Rik; CD51; D430040G12Rik	1110004F14Rik; 2610028E01Rik; CD51; D430040G12Rik
Mus musculus	RefSeq	ILMN_252128	ILMN_252128	WDR68	NM_027946.3	NM_027946.3		71833	70909359	NM_027946.3	Wdr68	NP_082222.1	ILMN_2994895	002190437	S	5597	AGCACCTGAGGGTGGAGTGTCCCTTCTGTGACCTTACTTCCTAGTACGTG	11	+	105920485-105920534	11qE1	Mus musculus WD repeat domain 68 (Wdr68), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			1700012F10Rik; 2610037L01Rik; C86529; HAN11	1700012F10Rik; 2610037L01Rik; C86529; HAN11
Mus musculus	RefSeq	ILMN_201978	ILMN_252128	WDR68	NM_027946.3	NM_027946.3		71833	70909359	NM_027946.3	Wdr68	NP_082222.1	ILMN_2546073	001850152	S	1410	AGAAGCTGCTGTAGAAGTCCAGGCCAGTTACCCCGCTGTCTGTGTTGGAC	11	+	105916298-105916347	11qE1	Mus musculus WD repeat domain 68 (Wdr68), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			1700012F10Rik; 2610037L01Rik; C86529; HAN11	1700012F10Rik; 2610037L01Rik; C86529; HAN11
Mus musculus	RefSeq	ILMN_204760	ILMN_252128	WDR68	NM_027946.3	NM_027946.3		71833	70909359	NM_027946.3	Wdr68	NP_082222.1	ILMN_1236349	004540647	S	1687	TGGGAACAAAGGCCAACTTGAGATTGTCTTTCCTCCTGGCACCAGTGTCT	11	+	105916575-105916624	11qE1	Mus musculus WD repeat domain 68 (Wdr68), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			1700012F10Rik; 2610037L01Rik; C86529; HAN11	1700012F10Rik; 2610037L01Rik; C86529; HAN11
Mus musculus	RefSeq	ILMN_215318	ILMN_215318	PCDHB16	NM_053141.3	NM_053141.3		93887	148728174	NM_053141.3	Pcdhb16	NP_444371.3	ILMN_2658008	005560458	S	4710	CTGGTGCAGTTAACCTTTTATCTTTGGCAAAATAATGCCCGTTGATGCCT				18qB3	Mus musculus protocadherin beta 16 (Pcdhb16), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence NAS]; The biosynthesis of a synapse [goid 7416] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence NAS]	PcdhbP; Pcdhb8	PcdhbP; Pcdhb8
Mus musculus	MEEBO	ILMN_223886	ILMN_223886	TAC2	scl38312.8.1_1				6678208	NM_009312	Tac2		ILMN_2771036	007150465	S	637	TCTACCCCTGGACCCCGGATTGCATCATAAAGCAGTGCCTGCTCCTGCTT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor [goid 7217] [evidence IEA]			
Mus musculus	RefSeq	ILMN_214125	ILMN_214125	ENAM	NM_017468.1	NM_017468.1		13801	8567349	NM_017468.1	Enam	NP_059496.1	ILMN_2799517	000510653	S	3873	GCCATGCTTTGGCTCCAATTCAAAATTTCACTCTTCTACCACTGGACCTC	5	+	89578993-89579042	5qE1	Mus musculus enamelin (Enam), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]			
Mus musculus	MEEBO	ILMN_187409	ILMN_187409	D030002E05RIK	scl39470.1.628_75						D030002E05Rik		ILMN_2443894	005340242	S	10	GAAACTATAACTATGTCTGTTCAAGTTGAAAAATAATTCTTCCTGTAGAT										
Mus musculus	RefSeq	ILMN_208695	ILMN_208695	ADD3	NM_013758.2	NM_013758.2		27360	31542110	NM_013758.2	Add3	NP_038786.2	ILMN_2901284	005310091	S	3737	GTCCTACATCATCTGTGTTGTGCTACAACGTGTGGAGACACAGTTACCTG	19	+	53321314-53321363	19qD2	Mus musculus adducin 3 (gamma) (Add3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI463285; R75380	AI463285; R75380
Mus musculus	RefSeq	ILMN_208695	ILMN_208695	ADD3	NM_013758.2	NM_013758.2		27360	31542110	NM_013758.2	Add3	NP_038786.2	ILMN_2901283	003450040	S	3538	CCACGAGTGGAAGTAAAGCGCCCTGCGGGTGACTTGGCACGCAAACGTGA	19	+	53321115-53321164	19qD2	Mus musculus adducin 3 (gamma) (Add3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI463285; R75380	AI463285; R75380
Mus musculus	RefSeq	ILMN_208695	ILMN_208695	ADD3	NM_013758.2	NM_013758.2		27360	31542110	NM_013758.2	Add3	NP_038786.2	ILMN_2588671	007650246	S	1873	GACGCTGCATCTGTTTCACAAATTCAGTCTCAAACTCAGTCACCGCAGAG	19	+	53318858-53318895:53319488-53319499	19qD2	Mus musculus adducin 3 (gamma) (Add3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AI463285; R75380	AI463285; R75380
Mus musculus	RefSeq	ILMN_190896	ILMN_253677	ZFP668	NM_146259.3	NM_146259.3		244219	141802081	NM_146259.3	Zfp668	NP_666371.1	ILMN_1246846	005860280	S	3197	CATGAAACCTTTCCTGATTACTGTCCTTTCACAATTAGTGAGCTGGGGTT	7	-	135009077-135009126	7qF3	Mus musculus zinc finger protein 668 (Zfp668), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	E130018B19Rik; MGC40890; BC030314	E130018B19Rik; MGC40890; BC030314
Mus musculus	RefSeq	ILMN_185115	ILMN_243533	MRPS15	NM_025544.2	NM_025544.2		66407	48526511	NM_025544.2	Mrps15	NP_079820.2	ILMN_1224268	005090332	S	478	GATGAACAAGATTGTGGAAAACCCTGAGGATTCCAGAACCTTGGAAGCTC	4	+	125728601-125728650	4qD2.2	Mus musculus mitochondrial ribosomal protein S15 (Mrps15), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	Mprs15; 1500003E24Rik; 2410002B11Rik	Mprs15; 1500003E24Rik; 2410002B11Rik
Mus musculus	RefSeq	ILMN_231246	ILMN_231246	RECK	NM_016678.1	NM_016678.1		53614	7710063	NM_016678.1	Reck	NP_057887.1	ILMN_2812614	007320239	S	3610	CCAGATACACTCGCCAGTACTCACCAAGTCCACAGGTTTAAAGGTCAGAC	4	+	43956925-43956974	4qB1	Mus musculus reversion-inducing-cysteine-rich protein with kazal motifs (Reck), mRNA.	Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence ISO]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state [goid 1955] [evidence IMP]; A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state [goid 1955] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IDA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence ISO]	mRECK; St15	mRECK; St15
Mus musculus	RefSeq	ILMN_201339	ILMN_261618	WDR81	XM_911699.3	XM_911699.3		192652	149262200	XM_911699.3	Wdr81	XP_916792.3	ILMN_1258029	004610162	S	5835	TTGGAAGGAGCTGGAACAGAAGCCCACGCACCACTACAAGTCAGCGTCCG				11qB5	PREDICTED: Mus musculus WD repeat domain 81 (Wdr81), mRNA.					
Mus musculus	RefSeq	ILMN_201339	ILMN_261618	WDR81	XM_911699.3	XM_911699.3		192652	149262200	XM_911699.3	Wdr81	XP_916792.3	ILMN_1220900	003990521	S	6589	CAGTATGGGACCAGAAAAAAGGGGATGTGAGAACAGGGCTAGGGAAGGGG				11qB5	PREDICTED: Mus musculus WD repeat domain 81 (Wdr81), mRNA.					
Mus musculus	RefSeq	ILMN_215812	ILMN_215812	FRAT1	NM_008043.2	NM_008043.2		14296	37059811	NM_008043.2	Frat1	NP_032069.2	ILMN_1227593	001260102	S	1823	ATCCCAGAGGAGGTGGGGATGGCGAGTGCTGAGTGTGCTTCCCGTCCGAG	19	+	41906428-41906477	19qC3	Mus musculus frequently rearranged in advanced T-cell lymphomas (Frat1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Axis specification in the embryo [goid 578] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]		AW060382	AW060382
Mus musculus	RefSeq	ILMN_215812	ILMN_215812	FRAT1	NM_008043.2	NM_008043.2		14296	37059811	NM_008043.2	Frat1	NP_032069.2	ILMN_1251022	002190138	S	1961	CTACTCAAGCAGGGTGGCGCTGATGATGCTAGGGGCCAGGGTAGGGGATT	19	+	41906566-41906615	19qC3	Mus musculus frequently rearranged in advanced T-cell lymphomas (Frat1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Axis specification in the embryo [goid 578] [evidence IDA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IGI]		AW060382	AW060382
Mus musculus	RefSeq	ILMN_235145	ILMN_235145	OLFR610	NM_147081.1	NM_147081.1		259085	22128924	NM_147081.1	Olfr610	NP_667292.1	ILMN_3160741	005310014	S	530	CTCATTCGTACTGTGTTCATCCCGATGTCCTAAGGCTGTCCTGTTCCAGC	7	-	110654879-110654928	7qE3	Mus musculus olfactory receptor 610 (Olfr610), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR9-2	MOR9-2
Mus musculus	Riken	ILMN_206673	ILMN_206673	E330009H06RIK	ri|E330009H06|PX00211B21|AK087704|3087					AK087704	E330009H06Rik		ILMN_1245636	007160072	S	2740	CTTCTGTGCTAGAATGACTGAGGAGGGGTTGGAGCCTCTGGAGCTAGGGC										
Mus musculus	RefSeq	ILMN_222954	ILMN_222954	FDX1	NM_007996.1	NM_007996.1		14148	6679764	NM_007996.1	Fdx1	NP_032022.1	ILMN_1213873	006420538	S	447	CTATGAGAAGTTAGATGCCATTACTGATGAAGAGAATGACATGCTTGACC	9	-	51756703-51756752	9qA5.3	Mus musculus ferredoxin 1 (Fdx1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186243	ILMN_331013	LOC100047162	XM_001477552.1	XM_001477552.1		100047162	149255614	XM_001477552.1	LOC100047162	XP_001477602.1	ILMN_1222500	006840279	S	141	GTTGCTGTGGTTGTCTGGTGTTGATGGAGACATTGTGATGACCCAGTCTC					PREDICTED: Mus musculus similar to immunoglobulin kappa-chain (LOC100047162), mRNA.					
Mus musculus	RefSeq	ILMN_200692	ILMN_200692	LOC383458	XM_357073.1	XM_357073.1			38085241	XM_357073.1	LOC383458		ILMN_1249713	001990072	S	168	AGGAGACTGGCTCCAGTGGGAAGATCCCCAGGCTCTGGAGAAGGGTTTCA										
Mus musculus	RefSeq	ILMN_216747	ILMN_216747	TCF12	NM_011544.2	NM_011544.2		21406	142370916	NM_011544.2	Tcf12	NP_035674.1	ILMN_1215928	003830647	S	2955	AGCCTAGCTAATATTTTGAAAGGGGAAGTTTTGTCCCCTGGATTTGCCCC	9	-	71693561-71693610	9qD	Mus musculus transcription factor 12 (Tcf12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	HEB; ME1; HTF4; HTF-4; REB; ALF1	HEB; ME1; HTF4; HTF-4; REB; ALF1
Mus musculus	RefSeq	ILMN_216747	ILMN_216747	TCF12	NM_011544.2	NM_011544.2		21406	142370916	NM_011544.2	Tcf12	NP_035674.1	ILMN_2722602	002030274	S	1261	CGAGTTGAGCAGCAACTTCACGAGCATTTGCAAGATGCAATGTCCTTCTT	9	-	71716821-71716870	9qD	Mus musculus transcription factor 12 (Tcf12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]	HEB; ME1; HTF4; HTF-4; REB; ALF1	HEB; ME1; HTF4; HTF-4; REB; ALF1
Mus musculus	RefSeq	ILMN_218447	ILMN_218447	LEP	NM_008493.3	NM_008493.3		16846	34328437	NM_008493.3	Lep	NP_032519.1	ILMN_2695964	006280059	S	3060	CCTGAGCCTTTCGCTCAGAGAACCTTGCACTATGGCTTGTTCCCAGATTG	6	+	29023679-29023728	6qA3.3	Mus musculus leptin (Lep), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The physiological process by which dietary excess is sensed by the central nervous system and results in a reduction in food intake and increased energy expenditure [goid 2021] [evidence IMP]; The physiological process by which dietary excess is sensed by the central nervous system and results in a reduction in food intake and increased energy expenditure [goid 2021] [evidence IGI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IDA]; Any process that modulates the frequency, rate or extent of gluconeogenesis, the formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6111] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 50810] [evidence IMP]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IMP]; Any process that modulates the frequency, rate or extent of absorption of cholesterol into the blood, and the exclusion of other sterols from absorption [goid 30300] [evidence IDA]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IDA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of myeloid cell differentiation [goid 45639] [evidence IDA]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IGI]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IGI]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IGI]; Any process that reduces appetite [goid 32099] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32868] [evidence IMP]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IMP]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]	ob; obese	ob; obese
Mus musculus	RefSeq	ILMN_200796	ILMN_200796	LOC381867	XM_355880.1	XM_355880.1			38086217	XM_355880.1	LOC381867		ILMN_2540038	000060687	S	185	ACAGATCTTCTGGTCTGAGAGACACCTGGGCAGTGGCCTTCCCGCTGCAA										
Mus musculus	Riken	ILMN_202963	ILMN_202963	A230020J09RIK	ri|A230020J09|PX00126I12|AK038497|841					AK038497	A230020J09Rik		ILMN_1230481	005420167	S	192	TTCGTCTGCACCGCTCTATGGTGACCCGAATCTCCGCTGCCCGAGTTGCA										
Mus musculus	MEEBO	ILMN_193940	ILMN_193940	PANX1	scl36211.6_124				9506950	NM_019482	Panx1		ILMN_2647544	006590280	S	1282	AGAACTCTCGCCAGAGGCTGTGTGAATCCGTCCTGCTAATGGTTTCCTTC						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 alpha from a cell or group of cells [goid 50717] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]			
Mus musculus	MEEBO	ILMN_193940	ILMN_193940	PANX1	scl36211.6_124				9506950	NM_019482	Panx1		ILMN_2501855	007210050	S	10	GTCACATTGGTTAACTTTAAGCCAGACTTTTAAAAATGCAGATTGATTTA						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 alpha from a cell or group of cells [goid 50717] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [evidence IMP]			
Mus musculus	RefSeq	ILMN_235010	ILMN_235010	ZFP41	NM_001044718.1	NM_001044718.1		22701	113462001	NM_001044718.1	Zfp41	NP_001038183.1	ILMN_3137980	002340403	A	3418	GTGGCACTGATGCTCCACGTTGCCTTCCAGTTGCTGCCATGGTGCTGTGA	15	+	75455614-75455663	15qD3	Mus musculus zinc finger protein 41 (Zfp41), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CTfin92; Zfp-41	CTfin92; Zfp-41
Mus musculus	MEEBO	ILMN_209300	ILMN_209300	2310040A13RIK	scl0002289.1_581	NM_027149.1			13386203	NM_027149.1	2310040A13Rik		ILMN_2594468	001430564	S	1136	AAATGACTTTGACTATGGGGTAACGGGCTCCCGGCCTCACGATACGAGAG										
Mus musculus	Riken	ILMN_201625	ILMN_201625	ANKRA2	ri|1110004M18|R000013J15|AK003438|1021					AK003438	Ankra2		ILMN_2543304	005890446	S	476	AATTCTCTGTCTGCTCACCAGTTGGCAGCCCAGGGAGAGATGCTCTACCT						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198560	ILMN_225316	OLFR1321	NM_207631.1	NM_207631.1		236785	52421340	NM_207631.1	Olfr1321	NP_997514.1	ILMN_1247217	007510671	S	614	TCCTCATGGCCTCCTTTGTCACCATGGGACCCTTCTTGCTCACTGTAGCC	X	-	47080446-47080495	XqA5	Mus musculus olfactory receptor 1321 (Olfr1321), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR264-26	MOR264-26
Mus musculus	RefSeq	ILMN_225316	ILMN_225316	OLFR1321	NM_207631.1	NM_207631.1		236785	52421340	NM_207631.1	Olfr1321	NP_997514.1	ILMN_2877571	006110025	S	479	CACCTGTTGTTACTGTCACAATGACTTTCCAGCTCCAGTTCTGTGCATCC	X	-	47080581-47080630	XqA5	Mus musculus olfactory receptor 1321 (Olfr1321), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR264-26	MOR264-26
Mus musculus	RefSeq	ILMN_215746	ILMN_254436	PKNOX2	NM_001029838.1	NM_001029838.1		208076	71067111	NM_001029838.1	Pknox2	NP_001025009.1	ILMN_1228567	002760376	S	1592	GCTACAGACAACGAATGTCAGCGACCTGGGCTTGGAACACAGTGACTCCC	9	-	36700416-36700465	9qA4	Mus musculus Pbx/knotted 1 homeobox 2 (Pknox2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	D230005H23Rik; Prep2	D230005H23Rik; Prep2
Mus musculus	RefSeq	ILMN_215746	ILMN_254436	PKNOX2	NM_001029838.1	NM_001029838.1		208076	71067111	NM_001029838.1	Pknox2	NP_001025009.1	ILMN_2686348	002190653	S	1394	CACCCCAGGGACGAACCCTGATGGTTCCATCAACTTGGACAACCTGCAGT	9	-	36700614-36700642:36701905-36701925	9qA4	Mus musculus Pbx/knotted 1 homeobox 2 (Pknox2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	D230005H23Rik; Prep2	D230005H23Rik; Prep2
Mus musculus	RefSeq	ILMN_215746	ILMN_254436	PKNOX2	NM_001029838.1	NM_001029838.1		208076	71067111	NM_001029838.1	Pknox2	NP_001025009.1	ILMN_2663139	000130075	S	1170	CCCACTGAAGATGAGAAGAGGCAGATTGCCGCGCAGACAAACCTCACCCT	9	-	36702912-36702961	9qA4	Mus musculus Pbx/knotted 1 homeobox 2 (Pknox2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	D230005H23Rik; Prep2	D230005H23Rik; Prep2
Mus musculus	RefSeq	ILMN_254436	ILMN_254436	PKNOX2	NM_001029838.1	NM_001029838.1		208076	71067111	NM_001029838.1	Pknox2	NP_001025009.1	ILMN_3135037	004860537	A	3177	GCCATACCTAGAGGAAAGGCAAGCTTTTTGGCGTGAGACTTTTGCAACCC	9	-	36698831-36698880	9qA4	Mus musculus Pbx/knotted 1 homeobox 2 (Pknox2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	D230005H23Rik; Prep2	D230005H23Rik; Prep2
Mus musculus	RefSeq	ILMN_254436	ILMN_254436	PKNOX2	NM_001029838.1	NM_001029838.1		208076	71067111	NM_001029838.1	Pknox2	NP_001025009.1	ILMN_3058014	003800286	I	114	TGACTAGAGGTGTTTCTGGCCCAGCTGGAAGTGAGAAGAGGGGGCAGACC	9	-	36794790-36794839	9qA4	Mus musculus Pbx/knotted 1 homeobox 2 (Pknox2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IGI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IDA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISA]	D230005H23Rik; Prep2	D230005H23Rik; Prep2
Mus musculus	RefSeq	ILMN_223033	ILMN_223033	FBXO44	NM_173401.2	NM_173401.2		230903	142364282	NM_173401.2	Fbxo44	NP_775577.1	ILMN_1229019	003830274	S	1542	GGGAGCGTCAATTCACACACTACCCCCTTGACCCTAGCACCACTCCATCC	4	-	147526946-147526995	4qE2	Mus musculus F-box protein 44 (Fbxo44), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5730411K09; Fbx6a; FBG3; AV001623; FBX30; Fbxo6a	5730411K09; Fbx6a; FBG3; AV001623; FBX30; Fbxo6a
Mus musculus	MEEBO	ILMN_220826	ILMN_220826	PIGW	scl39802.3_179	NM_027388.1			33859699	NM_027388.1	Pigw		ILMN_2727404	006020678	S	2059	GGGAGGAAATGTGTTCTTAGCAATCTAGTCTTAACCATACTTTATTATGA						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor) [goid 16746] [evidence IEA]		
Mus musculus	Riken	ILMN_204630	ILMN_204630	C730019C21RIK	ri|C730019C21|PX00086O16|AK050130|2944					AK050130	C730019C21Rik		ILMN_2566460	007550619	S	2438	CCTAGACACTGGAATACTGAGGCCATTCTAGCCTCCCTAGTCAGAGCTGT										
Mus musculus	RefSeq	ILMN_201353	ILMN_201353	LOC382513	XM_356543.1	XM_356543.1			38091609	XM_356543.1	LOC382513		ILMN_1212603	003170671	S	53	CCTGCAAATACATTCTACCTGCCTCTGGATGTGCCAGTGTGGTGTTCAGC										
Mus musculus	RefSeq	ILMN_216333	ILMN_216333	9930023K05RIK	NM_172641.2	NM_172641.2		226245	141803052	NM_172641.2	9930023K05Rik	NP_766229.1	ILMN_2669856	003190608	S	1119	ACGTGTTCCTCTCTCCTCGGGATGCCATCGACTACCTCGCTCTGGTAGAA	19	+	56555552-56555601	19qD2	Mus musculus RIKEN cDNA 9930023K05 gene (9930023K05Rik), mRNA.				MGC99964	MGC99964
Mus musculus	RefSeq	ILMN_216333	ILMN_216333	9930023K05RIK	NM_172641.2	NM_172641.2		226245	141803052	NM_172641.2	9930023K05Rik	NP_766229.1	ILMN_1250913	001030438	S	2142	CTCGATCTTCATGACTCTTGAGTTCTGAGCGGTTCGGGGAACAGAACCAC	19	+	56560979-56561028	19qD2	Mus musculus RIKEN cDNA 9930023K05 gene (9930023K05Rik), mRNA.				MGC99964	MGC99964
Mus musculus	RefSeq	ILMN_212590	ILMN_212590	SOCS2	NM_007706.3	NM_007706.3		216233	142379297	NM_007706.3	Socs2	NP_031732.1	ILMN_2628178	004210129	S	1219	CCCCTTAGGTAGTTTTAGCTGAATGATGCTTTCTTTCCTATGGCTGCTCA	10	-	94875041-94875090	10qC2	Mus musculus suppressor of cytokine signaling 2 (Socs2), mRNA.		Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with the growth hormone receptor [goid 5131] [evidence IPI]	D130043N08Rik; hg; Cish2; AI527257; SSI-2; SOCS-2; AW108012; JAB; CIS2; MGC118106; 8030460M17	D130043N08Rik; hg; Cish2; AI527257; SSI-2; SOCS-2; AW108012; JAB; CIS2; MGC118106; 8030460M17
Mus musculus	RefSeq	ILMN_221028	ILMN_252464	CIB3	XM_904518.3	XM_904518.3		234421	149259140	XM_904518.3	Cib3	XP_909611.2	ILMN_2730100	007550228	S	564	ACATGCTCAGAGGACAAGACCTGGCCCTCACCCATCTCTACTCTGCTCTC				8qB3.3	PREDICTED: Mus musculus calcium and integrin binding family member 3, transcript variant 3 (Cib3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_212985	ILMN_319923	LOC100047762	XM_001478835.1	XM_001478835.1		100047762	149270684	XM_001478835.1	LOC100047762	XP_001478885.1	ILMN_1217043	002070307	S	1317	TTAGCTGACCCCCCACATGAGAAGACGTTTCTTGAAATGAGCCCCGGGGG					PREDICTED: Mus musculus similar to Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate oxaloacetate transaminase 1) (LOC100047762), mRNA.					
Mus musculus	RefSeq	ILMN_223318	ILMN_223318	ACOT10	NM_022816.2	NM_022816.2		64833	154426267	NM_022816.2	Acot10	NP_073727.2	ILMN_2762433	003610609	S	749	CCACTCATTCCGGAAAATAAAGAAGAAGAAGAGCTCTTTACACAAGGAGA				15qA2	Mus musculus acyl-CoA thioesterase 10 (Acot10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence TAS]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IDA]	MT-ACT48; MGC124133; p48; MGC124134; Acate3	MT-ACT48; MGC124133; p48; MGC124134; Acate3
Mus musculus	RefSeq	ILMN_216366	ILMN_216366	FXN	NM_008044.2	NM_008044.2		14297	133892935	NM_008044.2	Fxn	NP_032070.1	ILMN_2670247	005420228	S	820	TCTACAGACATTTGTTAGGATTATGTCATTTGCTCCCCAACCTGAGACCT	19	-	24336168-24336217	19qB	Mus musculus frataxin (Fxn), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [evidence IMP]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IMP]; The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IMP]; The series of events by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception is mediated by proprioceptors, sensory nerve terminals found in muscles, tendons, and joint capsules, which give information concerning movements and position of the body. The receptors in the labyrinth are sometimes also considered proprioceptors [goid 19230] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organ of an organism [goid 46621] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [evidence IMP]; The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [evidence IMP]; The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]		FA; X25; FARR; Frda	FA; X25; FARR; Frda
Mus musculus	RefSeq	ILMN_237384	ILMN_237384	ABCA14	NM_026458.3	NM_026458.3		67928	83745125	NM_026458.3	Abca14	NP_080734.2	ILMN_2856262	006590307	S	4979	TGCCGAAGTTTTCCCAGGTAGCGACTTAAAGCAAGAGAATCAAGGGATCC	7	+	127462989-127463005:127468073-127468105	7qF2	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 14 (Abca14), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4930539G24Rik; 1700110B15Rik	4930539G24Rik; 1700110B15Rik
Mus musculus	RefSeq	ILMN_200960	ILMN_237384	ABCA14	NM_026458.3	NM_026458.3		67928	83745125	NM_026458.3	Abca14	NP_080734.2	ILMN_1258096	001660243	S	5158	CCTTTGCCAATCCAGATAACCCACGGAGCGGCTATGAGAAAGCAGTGCCC	7	+	127468640-127468689	7qF2	Mus musculus ATP-binding cassette, sub-family A (ABC1), member 14 (Abca14), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	4930539G24Rik; 1700110B15Rik	4930539G24Rik; 1700110B15Rik
Mus musculus	Riken	ILMN_205178	ILMN_205178	2610017G09RIK	ri|C230080G04|PX00177E01|AK048904|4153					AK048904	2610017G09Rik		ILMN_1226459	002510373	S	3732	GCTGCTGCTAGTCTCACCTGTGTCCGTTCACACACTGGCACTTTTTGTCC										
Mus musculus	RefSeq	ILMN_196717	ILMN_196717	KLRA21	NM_053151.1	NM_053151.1		93968	21361215	NM_053151.1	Klra21	NP_444381.1	ILMN_1236777	004010189	S	656	GAAGATAAAGATGAACTGAAATTCCTTCAGCGCCATGTTATTACAGAGGG					Mus musculus killer cell lectin-like receptor subfamily A, member 21 (Klra21), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ly49u	Ly49u
Mus musculus	RefSeq	ILMN_196717	ILMN_196717	KLRA21	NM_053151.1	NM_053151.1		93968	21361215	NM_053151.1	Klra21	NP_444381.1	ILMN_1219419	001500482	S	944	GCTGTGAAGAGAAACAAAGCTGCAAGAACATTGGGACTGTCCTCTCGACC					Mus musculus killer cell lectin-like receptor subfamily A, member 21 (Klra21), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ly49u	Ly49u
Mus musculus	RefSeq	ILMN_214556	ILMN_214556	OLFR160	NM_030553.1	NM_030553.1		80706	13386471	NM_030553.1	Olfr160	NP_085030.1	ILMN_1259089	006480059	S	588	GGCTGTCTTCTTTTTAGCTGGGTTCAACATTATAGTTACCAGCTTAACCG	9	-	37519225-37519274	9qA4	Mus musculus olfactory receptor 160 (Olfr160), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-3; M72; Olfr7b	MOR171-3; M72; Olfr7b
Mus musculus	RefSeq	ILMN_209719	ILMN_209719	2410091C18RIK	NM_028611.2	NM_028611.2		73694	142385424	NM_028611.2	2410091C18Rik	NP_082887.1	ILMN_2675254	001340519	S	1412	GAAGTAACATAAGTTTTCAAACTAGTATCTCTTTTCAGTCAATAAAAATA	17	+	79346502-79346551	17qE3	Mus musculus RIKEN cDNA 2410091C18 gene (2410091C18Rik), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			AL033374; MGC117993; PRO1853	AL033374; MGC117993; PRO1853
Mus musculus	RefSeq	ILMN_209719	ILMN_209719	2410091C18RIK	NM_028611.2	NM_028611.2		73694	142385424	NM_028611.2	2410091C18Rik	NP_082887.1	ILMN_2598520	004880376	S	533	GGTCCCATTGGAGAGAGACGCTGAATCCCTGGTGTACATGAAAGGTGTCA	17	+	79341519-79341568	17qE3	Mus musculus RIKEN cDNA 2410091C18 gene (2410091C18Rik), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			AL033374; MGC117993; PRO1853	AL033374; MGC117993; PRO1853
Mus musculus	RefSeq	ILMN_209719	ILMN_209719	2410091C18RIK	NM_028611.2	NM_028611.2		73694	142385424	NM_028611.2	2410091C18Rik	NP_082887.1	ILMN_2618048	005560273	S	1670	TACAATCAAAATGGTAGAATGTCAAAGGTTATAACTAACTCTTGGTATAA	17	+	79346760-79346809	17qE3	Mus musculus RIKEN cDNA 2410091C18 gene (2410091C18Rik), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			AL033374; MGC117993; PRO1853	AL033374; MGC117993; PRO1853
Mus musculus	RefSeq	ILMN_219406	ILMN_219406	NAT6	NM_019750.3	NM_019750.3		56441	142365492	NM_019750.3	Nat6	NP_062724.1	ILMN_2708415	006110435	S	1391	TGGCTTTGGTCGCCGCCTCATGGAAGGCTTGGAGGCCTTTGCCAGAGCCC	9	+	107485772-107485821	9qF1	Mus musculus N-acetyltransferase 6 (Nat6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	fusion 2; Fus2; AI225910; Fus 2	fusion 2; Fus2; AI225910; Fus 2
Mus musculus	RefSeq	ILMN_216946	ILMN_217187	CCNDBP1	NM_010761.2	NM_010761.2		17151	111955252	NM_010761.2	Ccndbp1	NP_034891.2	ILMN_1234319	005910504	S	67	TTAAGCGTCTTAGCTGGTTCCCAGAGAGAGCCTGCGATGGCGAGCTCGAC	2	+	120834210-120834245:120834246-120834259	2qE5	Mus musculus cyclin D-type binding-protein 1 (Ccndbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	SECC-8; Maid; AU022347; SSEC-8; DIP1; GCIP	SECC-8; Maid; AU022347; SSEC-8; DIP1; GCIP
Mus musculus	RefSeq	ILMN_217187	ILMN_217187	CCNDBP1	NM_010761.2	NM_010761.2		17151	111955252	NM_010761.2	Ccndbp1	NP_034891.2	ILMN_1240178	000940639	S	1114	GCCGTTGACCATTGCATGAACAGAATTAAGGCGCTCACTCAGCGTGCAGC	2	+	120842190-120842239	2qE5	Mus musculus cyclin D-type binding-protein 1 (Ccndbp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence TAS]	SECC-8; Maid; AU022347; SSEC-8; DIP1; GCIP	SECC-8; Maid; AU022347; SSEC-8; DIP1; GCIP
Mus musculus	Riken	ILMN_206281	ILMN_206281	A730061M06RIK	ri|A730061M06|PX00316J11|AK080503|1444					AK080503	A730061M06Rik		ILMN_2578947	005220609	S	1368	CCAGGAATGAGTCCCAAGCACTAGATTAAAGGTGTGTACTACCACCACCC										
Mus musculus	RefSeq	ILMN_221964	ILMN_221964	TMEM157	NM_026321.3	NM_026321.3		67698	142347564	NM_026321.3	Tmem157	NP_080597.2	ILMN_2742739	001340192	S	1504	CAGGATTTTATCTAGAGACTAGCATTATCTTGCAACAAATCCATTCCCAC	1	+	97231374-97231423	1qD	Mus musculus transmembrane protein 157 (Tmem157), mRNA.				2310044D20Rik	2310044D20Rik
Mus musculus	RefSeq	ILMN_190380	ILMN_226117	MYCT1	NM_026793.1	NM_026793.1		68632	22094130	NM_026793.1	Myct1	NP_081069.1	ILMN_2593012	000540195	S	1299	AAACCCTTGGACTTAGGGGGCATGAGGATTTAATATGCCTGCGGGGTAAC	10	-	4741127-4741176	10qA1	Mus musculus myc target 1 (Myct1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			AI225941; Mtmc1; 1110020B04Rik; AI642973	AI225941; Mtmc1; 1110020B04Rik; AI642973
Mus musculus	RefSeq	ILMN_184539	ILMN_184539	TNFRSF18	NM_009400.2	NM_009400.2		21936	118130405	NM_009400.2	Tnfrsf18	NP_033426.1	ILMN_2419490	003180156	S	522	GGTCATGGCTGCATGCATTTTCTTCCTAACCACAGTCCAGCTCGGCCTGC	4	+	155402444-155402493	4qE2	Mus musculus tumor necrosis factor receptor superfamily, member 18 (Tnfrsf18), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AITR; Gitr	AITR; Gitr
Mus musculus	RefSeq	ILMN_221606	ILMN_221606	EDN1	NM_010104.2	NM_010104.2		13614	31981794	NM_010104.2	Edn1	NP_034234.1	ILMN_2737713	004640711	S	1361	GGGTTTCTGTAGAAAGTCCTTAGGGAGTGTTCGTGTCTGACTCAGGCGCC	13	+	42402581-42402630	13qA4	Mus musculus endothelin 1 (Edn1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	A decrease in the diameter of blood vessels, especially arteries, usually causing an increase in blood pressure [goid 42310] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IMP]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IDA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IDA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of smooth muscle contraction [goid 45987] [evidence IDA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [evidence IDA]; Any process involved in the generation of rhythmic, synchronous excitatory synaptic inputs in a neural circuit [goid 43179] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IMP]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [evidence IDA]; A G-protein coupled signaling pathway that results in the activation of phospholipase D, causing an increase in cellular levels of phosphatidic acid [goid 31583] [evidence IDA]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IMP]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IEA]; The process of renal water excretion [goid 30146] [evidence IMP]; The process of renal water excretion [goid 30146] [evidence IGI]; The process of renal sodium excretion [goid 30147] [evidence IMP]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The regulated release of a fluid by a cell or group of cells in a multicellular organism [goid 7589] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with an endothelin A receptor [goid 31707] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]	ET-1; preproET	ET-1; preproET
Mus musculus	RefSeq	ILMN_196487	ILMN_196487	3830404O05RIK	XM_133059.2	XM_133059.2			38083928	XM_133059.2	3830404O05Rik		ILMN_2524471	005090463	S	1305	CCCCCCATCTCACTTAGAAGGGACCTGGAACACTTAATGCTCCTGATTGG										
Mus musculus	RefSeq	ILMN_191594	ILMN_257638	TRIM25	NM_009546.2	NM_009546.2		217069	145207947	NM_009546.2	Trim25	NP_033572.2	ILMN_2480463	000010402	S	5398	CCTGCAGATGAACACATAGCTGTGCTTTAGGCTGATGCACCCGTGTCCTG				11qC	Mus musculus tripartite motif-containing 25 (Trim25), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EFP; Zfp147; AA960166; AL022677	EFP; Zfp147; AA960166; AL022677
Mus musculus	RefSeq	ILMN_250951	ILMN_250951	AI413582	NM_001002895.2	NM_001002895.2		106672	126157526	NM_001002895.2	AI413582	NP_001002895.2	ILMN_2857595	002030639	S	369	TCTGATGTGGGAGACCCCAAGGTGGTTCATGGCTGGCAGAGCAGCTACCA	17	-	27704195-27704224:27704357-27704376	17qA3.3	Mus musculus expressed sequence AI413582 (AI413582), mRNA.				MGC41609; AI854251	MGC41609; AI854251
Mus musculus	RefSeq	ILMN_195288	ILMN_195288	ZDHHC5	NM_144887.3	NM_144887.3		228136	42476269	NM_144887.3	Zdhhc5	NP_659136.1	ILMN_2779318	002260044	S	4254	GGTGCTGGGTAGAGGGGGTAGCTGGGTTCTAACCTTTAAACAGGGAAGAC	2	-	84528384-84528433	2qD	Mus musculus zinc finger, DHHC domain containing 5 (Zdhhc5), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1110032A17Rik; Zisp; MGC28179; AI451382	1110032A17Rik; Zisp; MGC28179; AI451382
Mus musculus	MEEBO	ILMN_210333	ILMN_210333	COTL1	scl072042.2_8	XM_150115.1			20887082	XM_150115.1	Cotl1		ILMN_2604521	003120703	S	651	CAGTGGCTCTGCCACGTGGTCTAAACTACCCTTTTGGCGAAGCCTTTCTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Reactions triggered in response to the presence of a fungus that act to protect the cell or organism [goid 50832] [evidence IDA]	Interacting selectively with any enzyme [goid 19899] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]		
Mus musculus	RefSeq	ILMN_195651	ILMN_261108	C130092O11RIK	XM_989610.1	XM_989610.1		232035	94378669	XM_989610.1	C130092O11Rik	XP_994704.1	ILMN_2517462	002900719	S	2705	TAAAATATAAAGGGGTTCTCTTACTCATTTCTATCTATTGTGAGGACTGT				6qB3	PREDICTED: Mus musculus RIKEN cDNA C130092O11 gene (C130092O11Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213079	ILMN_213079	MTAP4	NM_008633.2	NM_008633.2		17758	148747188	NM_008633.2	Mtap4	NP_032659.2	ILMN_1249718	007380170	S	3002	CCAAAAAAGTGAGCTACAGCCATATTCAATCCAAGTGTGGTTCCAAGGAC				9qF2	Mus musculus microtubule-associated protein 4 (Mtap4), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]		MAP4; Mtap-4; AA407148	MAP4; Mtap-4; AA407148
Mus musculus	RefSeq	ILMN_213079	ILMN_213079	MTAP4	NM_008633.2	NM_008633.2		17758	148747188	NM_008633.2	Mtap4	NP_032659.2	ILMN_2633367	002030504	S	1939	GCACCTTCTCCATTAGAGAACTTAGAGCAGAAGGAAACGCCTGGCAGCCA				9qF2	Mus musculus microtubule-associated protein 4 (Mtap4), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]		MAP4; Mtap-4; AA407148	MAP4; Mtap-4; AA407148
Mus musculus	RefSeq	ILMN_213079	ILMN_213079	MTAP4	NM_008633.2	NM_008633.2		17758	148747188	NM_008633.2	Mtap4	NP_032659.2	ILMN_2723462	001240600	S	4719	AATTTTATCAACACAAGATTCTTATTGCACTTGTATTTTTTGTATTAAAG				9qF2	Mus musculus microtubule-associated protein 4 (Mtap4), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]		MAP4; Mtap-4; AA407148	MAP4; Mtap-4; AA407148
Mus musculus	RefSeq	ILMN_217928	ILMN_217928	HYDIN	NM_172916.2	NM_172916.2		244653	31541985	NM_172916.2	Hydin	NP_766504.3	ILMN_1219007	006580288	S	15534	GGCACCGAATCTGGAATCAAATGGGTTTATTATCTGAAGGGGATCACCCC	8	+	113133904-113133953	8qE1	Mus musculus hydrocephalus inducing (Hydin), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AC069308.21gm4; hy-3; 4930545D19Rik; hy3; 4932703P14; 1700034M11Rik; A830061H17	AC069308.21gm4; hy-3; 4930545D19Rik; hy3; 4932703P14; 1700034M11Rik; A830061H17
Mus musculus	RefSeq	ILMN_215659	ILMN_215659	FMOD	NM_021355.3	NM_021355.3		14264	142348716	NM_021355.3	Fmod	NP_067330.1	ILMN_1230020	006110520	S	2046	CCTTTGGTCTAGTATGAAGGGTTGTTACGCAAATGGCAGAGGCAGACTCC	1	+	135944041-135944090	1qE4	Mus musculus fibromodulin (Fmod), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AU041740; SLRR2E; AI131919	AU041740; SLRR2E; AI131919
Mus musculus	MEEBO	ILMN_224232	ILMN_224232	EMR4	scl50610.18.1_1				20982826	NM_139138	Emr4		ILMN_2777034	001710603	S	3066	GACTGTTATTTTTTCCTGGCAATACTTTATTCAACAAGAACCTAGAGCCT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence ISA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Mus musculus	RefSeq	ILMN_197417	ILMN_197417	LOC269335	XM_195854.3	XM_195854.3			38075665	XM_195854.3	LOC269335		ILMN_1249811	002030301	S	138	ATGACCAGAGTTGTGTGATAATTCCGTGTCTTCCCGATCACAGACAGGAG										
Mus musculus	RefSeq	ILMN_193381	ILMN_193381	ZFP263	NM_148924.2	NM_148924.2		74120	31343562	NM_148924.2	Zfp263	NP_683726.1	ILMN_2496621	001440270	S	3041	CCTGTCAAAAGGTACCTAGAGCTCTGTAGACATGATTATGAGTGGAGGGT	16	+	3750619-3750668	16qA1	Mus musculus zinc finger protein 263 (Zfp263), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]	AU020888; 1200014J04Rik; NT2; AI326880	AU020888; 1200014J04Rik; NT2; AI326880
Mus musculus	RefSeq	ILMN_211638	ILMN_227974	KLF13	NM_021366.2	NM_021366.2		50794	31981129	NM_021366.2	Klf13	NP_067341.2	ILMN_1218206	004540291	S	1007	CACGCACACGGGCGAGAAGAAGTTCAGCTGCCCCATCTGTGAGAAGCGCT	7	-	71036518-71036567	7qC	Mus musculus Kruppel-like factor 13 (Klf13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence ISS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Bteb3; 0610043C13Rik; NSLP1; FKLF2; RFLAT-1; FKLF-2; RFLAT1	Bteb3; 0610043C13Rik; NSLP1; FKLF2; RFLAT-1; FKLF-2; RFLAT1
Mus musculus	RefSeq	ILMN_222695	ILMN_222695	NFKBIL2	NM_183091.2	NM_183091.2		72749	46048406	NM_183091.2	Nfkbil2	NP_898914.2	ILMN_1231514	003180424	S	4005	GGAGTTGCAACTGTGCACCAAAGACCTGAGCACCAAAGACCGAGACTCGG	15	-	76462528-76462532:76462391-76462435	15qD3	Mus musculus nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 2 (Nfkbil2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810439M11Rik	2810439M11Rik
Mus musculus	MEEBO	ILMN_218340	ILMN_218340	A230066D03RIK	scl0380656.1_6	XM_358398.1			38090685	XM_358398.1	A230066D03Rik		ILMN_2694557	005670392	S	186	ACCAGGCAGCCCGGCGAGCCCCGCCCGTCTCGATCCTGGCCTCAGTGTAC										
Mus musculus	RefSeq	ILMN_199842	ILMN_199842	LOC383074	XM_356843.1	XM_356843.1			38077940	XM_356843.1	LOC383074		ILMN_2536681	006290019	S	714	ACAGCCACCTCCCGGGGAGTCAACGGATGCGGCGAGCAAAAGGAAGAGAT										
Mus musculus	RefSeq	ILMN_199877	ILMN_241195	UBE2U	NM_001033773.3	NM_001033773.3		381534	146198813	NM_001033773.3	Ube2u	NP_001028945.1	ILMN_1238785	007570170	S	1175	AGAATCCTGGGAAGAGGAAGCAGACCACCTGGTCTCCTGGACCAATGGTC				4qC6	Mus musculus ubiquitin-conjugating enzyme E2U (putative) (Ube2u), mRNA.					
Mus musculus	Riken	ILMN_207141	ILMN_207141	F730007G21RIK	ri|F730007G21|PL00003C11|AK089333|2475					AK089333	F730007G21Rik		ILMN_1238641	000990296	S	2143	GCACTTGATCTCATTTTGCCCAGCTGTGTCTCAAGCCATGCGCTGCTCTC										
Mus musculus	RefSeq	ILMN_186232	ILMN_312969	LOC629242	XM_001479180.1	XM_001479180.1		629242	149267905	XM_001479180.1	LOC629242	XP_001479230.1	ILMN_2433768	000160288	S	1480	TAAACAGAAGAAGAGGGGAATGAAAGGAAATAAAACTGTAATTCATGTAA				16qC1.1	PREDICTED: Mus musculus hypothetical protein LOC629242 (LOC629242), mRNA.					
Mus musculus	MEEBO	ILMN_218457	ILMN_218457	9330120H11RIK	scl31104.1.1_38	NM_177029.3			31581571	NM_177029.3	9330120H11Rik		ILMN_1221522	005080709	S	3365	CCCTTCAAACTGGAGTTTATCTTTTACTGAGGAGAGAGTTGAAATTATAC										
Mus musculus	RefSeq	ILMN_198099	ILMN_198099	LOC224573	XM_139789.4	XM_139789.4			38081833	XM_139789.4	LOC224573		ILMN_2530489	006020241	S	4908	GACGGCCACTAATGCACCACTCCAAGAACAACCACAGAATGTTCCAGCCC										
Mus musculus	MEEBO	ILMN_186152	ILMN_186152	RNF26	scl0213211.1_202				46048335	NM_153762	Rnf26		ILMN_2730966	005340286	S	2912	GCTGAAGCCTAGGGAGACCATGTTCAAGTGGTAAATAAATGTCAAGTGTC								Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217994	ILMN_243016	PKIB	NM_001039050.1	NM_001039050.1		18768	84794582	NM_001039050.1	Pkib	NP_001034139.1	ILMN_2690241	000110593	S	2782	GGAATGGAGAGAACAGAGCTGGGATGCTGCTATTAACGGGTAGTAGACCT	10	+	57458119-57458168	10qB4	Mus musculus protein kinase inhibitor beta, cAMP dependent, testis specific (Pkib), transcript variant 2, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IEA]	PKIbeta; Prkacn2	PKIbeta; Prkacn2
Mus musculus	RefSeq	ILMN_202430	ILMN_243016	PKIB	NM_001039050.1	NM_001039050.1		18768	84794582	NM_001039050.1	Pkib	NP_001034139.1	ILMN_1217389	002370026	S	1078	AGGTGTTACTTTCAAATTGCACCCAAGGAAGGACACACTGTTTATGCCCC	10	+	57456415-57456464	10qB4	Mus musculus protein kinase inhibitor beta, cAMP dependent, testis specific (Pkib), transcript variant 2, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IEA]	PKIbeta; Prkacn2	PKIbeta; Prkacn2
Mus musculus	RefSeq	ILMN_246128	ILMN_246128	TMBIM1	NM_027154.3	NM_027154.3		69660	31980813	NM_027154.3	Tmbim1	NP_081430.2	ILMN_2908056	005820626	S	1775	TGTGGCTGGGAAGCAGTCTGGGTGAGAGATAAGTGGGGACAGGGAAAGCG	1	-	74221762-74221811	1qC3	Mus musculus transmembrane BAX inhibitor motif containing 1 (Tmbim1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2310061B02Rik; Tmbib1; AA960455; mKIAA4161; KIAA4161; C78899; AU024746	2310061B02Rik; Tmbib1; AA960455; mKIAA4161; KIAA4161; C78899; AU024746
Mus musculus	RefSeq	ILMN_186902	ILMN_231734	IDH1	NM_010497.2	NM_010497.2		15926	58037545	NM_010497.2	Idh1	NP_034627.2	ILMN_2729458	001190112	S	1387	GGTCAAACCTGGGCTTAGAATGAGTCTTTGCGGTAACTAGGTCCACAGGT	1	-	65205988-65206037	1qC2	Mus musculus isocitrate dehydrogenase 1 (NADP+), soluble (Idh1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IDA]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IMP]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate [goid 6097] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle [goid 6102] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+ [goid 4450] [evidence IDA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+ [goid 4450] [evidence IDA]	Idh-1; E030024J03Rik; MGC115782; AI788952; IDPc; AI314845; Id-1	Idh-1; E030024J03Rik; MGC115782; AI788952; IDPc; AI314845; Id-1
Mus musculus	RefSeq	ILMN_189978	ILMN_244675	TNRC15	NM_146112.3	NM_146112.3		227331	142382552	NM_146112.3	Tnrc15	NP_666224.2	ILMN_1247017	004050561	S	3934	CGAGCAGATCCCAGTTTATTAGGGTTTTCAGTCAACGCCTCGTCAGAGCG	1	+	89343013-89343034:89345653-89345680	1qD	Mus musculus trinucleotide repeat containing 15 (Tnrc15), mRNA.				AW259676; BC006835; Gigyf2; AI852361; A830080H02Rik; 2610016F01Rik; MGC38689; mKIAA0642	AW259676; BC006835; Gigyf2; AI852361; A830080H02Rik; 2610016F01Rik; MGC38689; mKIAA0642
Mus musculus	RefSeq	ILMN_210416	ILMN_210416	MB	NM_013593.2	NM_013593.2		17189	21359819	NM_013593.2	Mb	NP_038621.2	ILMN_1234662	001710341	S	503	TGAAGTCCTGAAGAAGAGACATTCCGGGGACTTTGGAGCAGATGCTCAGG	15	-	76846420-76846469	15qD3	Mus musculus myoglobin (Mb), mRNA.		The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	AI325109	AI325109
Mus musculus	RefSeq	ILMN_210416	ILMN_210416	MB	NM_013593.2	NM_013593.2		17189	21359819	NM_013593.2	Mb	NP_038621.2	ILMN_2954987	001470154	S	874	GGGAAAATCTCTTTTCCACTGTCACATTTGACCCCAAATCCAAGTCACTG	15	-	76846049-76846098	15qD3	Mus musculus myoglobin (Mb), mRNA.		The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IMP]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IMP]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	AI325109	AI325109
Mus musculus	RefSeq	ILMN_216395	ILMN_216395	STYXL1	NM_029659.2	NM_029659.2		76571	15805021	NM_029659.2	Styxl1	NP_083935.2	ILMN_2680229	003930593	S	870	TCACTGAGGAGTCTTGGTTGGGACTTTGGGGGACTGGGGAGCTGGGTTTG	5	-	136032319-136032368	5qG2	Mus musculus serine/threonine/tyrosine interacting-like 1 (Styxl1), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Dusp24; Mkstyx; 1700011C14Rik	Dusp24; Mkstyx; 1700011C14Rik
Mus musculus	RefSeq	ILMN_193237	ILMN_258516	SYDE1	XM_359260.3	XM_359260.3		71709	94388437	XM_359260.3	Syde1	XP_359260.3	ILMN_2596183	001820148	S	3140	CTTTCAGGGACCATAGAGTGGGATAGGATTTTCCATTGCCTGGCACCCCA	10	-	78047346-78047395	10qC1	PREDICTED: Mus musculus synapse defective 1, Rho GTPase, homolog 1 (C. elegans) (Syde1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	Riken	ILMN_205697	ILMN_205697	B430114K07RIK	ri|B430114K07|PX00071C24|AK046591|2220					AK046591	B430114K07Rik		ILMN_1251776	004760343	S	1811	GGAGCTGAGCATTAAACACTAGGCTAAGTCTCAGCCTCTGACTGGAGAGT										
Mus musculus	Riken	ILMN_201801	ILMN_201801	2310067P03RIK	ri|2310067P03|ZX00059P02|AK010100|1033					AK010100	2310067P03Rik		ILMN_2544692	004570349	S	501	CAGCAGGTGTTCGAAGTCCAGTTGCACAATCACAGCAGTTGCCTGGCATC										
Mus musculus	Riken	ILMN_206198	ILMN_206198	C130015I21RIK	ri|C130015I21|PX00167C02|AK081416|3274					AK081416	C130015I21Rik		ILMN_1260128	005900463	S	3039	GGAATACTTGTAGTGCCACTGCCTGCTCTGATTCATAAGCTCAGCACAGC										
Mus musculus	MEEBO	ILMN_223106	ILMN_223106	8030498B09RIK	scl37226.1.1_62	NM_023867.1			21539644	NM_023867.1	8030498B09Rik		ILMN_2759443	004570315	S	638	TGTCCTTGGTGAGTTCACCCAATTCCATCCCTAGTGCATACACAAAAGCC										
Mus musculus	RefSeq	ILMN_253613	ILMN_253613	ALDH18A1	NM_019698.1	NM_019698.1		56454	9790060	NM_019698.1	Aldh18a1	NP_062672.1	ILMN_3123473	004150168	A	3193	GTCTCCGGCCTGGGGACACATGGTACCTTCAAAGTAGTTGGAATCTGAGC	19	-	40624937-40624986	19qC3	Mus musculus aldehyde dehydrogenase 18 family, member A1 (Aldh18a1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-glutamate 5-semialdehyde + phosphate + NADP+ = L-gamma-glutamyl 5-phosphate + NADPH + H+ [goid 4350] [evidence IEA]; Catalysis of the reaction: ATP + L-glutamate = ADP + L-glutamate 5-phosphate [goid 4349] [evidence IDA]; Catalysis of the reaction: ATP + L-glutamate = ADP + L-glutamate 5-phosphate [goid 4349] [evidence IGI]	2810433K04Rik; Pycs; AI429789; MGC32233	2810433K04Rik; Pycs; AI429789; MGC32233
Mus musculus	RefSeq	ILMN_222426	ILMN_222426	DUS4L	NM_028002.2	NM_028002.2		71916	141801159	NM_028002.2	Dus4l	NP_082278.1	ILMN_1254444	004120309	S	1561	CCGCCCGGTACTCCGTCCTCATGGATTCAGTAGATTGTGAGCAGACCCAG	12	-	32325077-32325126	12qA3	Mus musculus dihydrouridine synthase 4-like (S. cerevisiae) (Dus4l), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor [goid 17150] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	MGC130363; Pp35; 2310069P03Rik; 2700089B10Rik; AI482040	MGC130363; Pp35; 2310069P03Rik; 2700089B10Rik; AI482040
Mus musculus	RefSeq	ILMN_216445	ILMN_216445	KRT23	NM_033373.1	NM_033373.1		94179	15431280	NM_033373.1	Krt23	NP_203537.1	ILMN_2671165	004780164	S	1352	CCCCCTATGGAAAGTCTTTGTCTCCGCGCTAATGGGTGAGTCTCGACGGA	11	-	99339424-99339473	11qD	Mus musculus keratin 23 (Krt23), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Haik1; Krt1-23; CK23; K23	Haik1; Krt1-23; CK23; K23
Mus musculus	RefSeq	ILMN_216915	ILMN_216915	PDK3	NM_145630.2	NM_145630.2		236900	118130212	NM_145630.2	Pdk3	NP_663605.1	ILMN_2676876	005690382	S	1291	CTCCTGAAGCTGATGACTGGAGCAATCCCAGCAGTGAACCAAGGGATGCA	X	-	91014247-91014296	XqC3	Mus musculus pyruvate dehydrogenase kinase, isoenzyme 3 (Pdk3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The posttranslational phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine) [goid 18106] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor) [goid 16772] [evidence IEA]; Catalysis of the reaction: ATP + protein L-histidine = ADP + protein phospho-L-histidine [goid 4673] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate dehydrogenase (acetyl-transferring) = ADP + pyruvate dehydrogenase (acetyl-transferring) phosphate [goid 4740] [evidence IEA]	MGC6383; 2610001M10Rik; AI035637	MGC6383; 2610001M10Rik; AI035637
Mus musculus	RefSeq	ILMN_222750	ILMN_222750	SGSM2	NM_197943.2	NM_197943.2		97761	117956384	NM_197943.2	Sgsm2	NP_922934.2	ILMN_2754233	007050180	S	4429	GGTCCACAGACTTGCTGCAGCTGAAAAACACGAGAAAGGACCAGCCGCAT	11	-	74663047-74663096	11qB5	Mus musculus small G protein signaling modulator 2 (Sgsm2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	RP23-174M12.3; R74628; mKIAA0397; D630003G22Rik	RP23-174M12.3; R74628; mKIAA0397; D630003G22Rik
Mus musculus	RefSeq	ILMN_190085	ILMN_231399	LOC674072	XM_973700.1	XM_973700.1		674072	94393639	XM_973700.1	LOC674072	XP_978794.1	ILMN_2467044	003450392	S	237	GCTCCAGGGAAAGGGCTAGAATGGATTGGAGAAATTAATCCAGATAGCAG					PREDICTED: Mus musculus similar to Ig heavy chain V region 441 precursor (LOC674072), mRNA.					
Mus musculus	RefSeq	ILMN_238225	ILMN_238225	COX7A2L	NM_009187.1	NM_009187.1		20463	6677976	NM_009187.1	Cox7a2l	NP_033213.1	ILMN_2888713	001260554	S	237	GGTTTCCACCTGAAACGAGGCCTTCCAGACCAAATGCTTTACCGGACCAC	17	-	83411004-83411053	17qE4	Mus musculus cytochrome c oxidase subunit VIIa polypeptide 2-like (Cox7a2l), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	EB1; Silg81; SIG-81; COX7AR; SIG81; MGC103208; COX7RP	EB1; Silg81; SIG-81; COX7AR; SIG81; MGC103208; COX7RP
Mus musculus	RefSeq	ILMN_211510	ILMN_211510	DUXBL	NM_183389.1	NM_183389.1		278672	34419644	NM_183389.1	Duxbl	NP_899245.1	ILMN_2719417	005310528	S	731	AGCAGAGTTTGCATGCTGTTCTGAAGAAAGCCAAGAGCAGGAGCAGGATA	14	+	26806285-26806334	14qA3	Mus musculus double homeobox B-like (Duxbl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC67567	MGC67567
Mus musculus	RefSeq	ILMN_211510	ILMN_211510	DUXBL	NM_183389.1	NM_183389.1		278672	34419644	NM_183389.1	Duxbl	NP_899245.1	ILMN_2719418	003990333	S	732	GCAGAGTTTGCATGCTGTTCTGAAGAAAGCCAAGAGCAGGAGCAGGATAA	14	+	26806286-26806335	14qA3	Mus musculus double homeobox B-like (Duxbl), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC67567	MGC67567
Mus musculus	MEEBO	ILMN_217742	ILMN_217742	AI481316	scl15987.1.1_285	XM_148986.1			20829528	XM_148986.1	AI481316		ILMN_1254631	004490639	S	951	CCTGCCTTTGTTCGTGCTATGAAATGACCACACCCTATGTACTTGGCTGT										
Mus musculus	MEEBO	ILMN_188210	ILMN_188210	2610524G07RIK	scl44736.3.1_23				50582543	NM_025596	2610524G07Rik		ILMN_2450724	004070438	S	16	GAGTAACTCTCCCATCCTTCTCCCTCTCCTGCCAGGAATTTGGTCTTGCC										
Mus musculus	RefSeq	ILMN_213953	ILMN_226300	ATF4	NM_009716.2	NM_009716.2		11911	121949820	NM_009716.2	Atf4	NP_033846.2	ILMN_2642681	003360082	S	1570	GCCAAGGAGATCCAGTATCTGAAAGACCTGATAGAAGAGGTCCGTAAGGC	15	+	80087816-80087865	15qE1	Mus musculus activating transcription factor 4 (Atf4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TAXREB67; MGC96460; CREB2; Atf-4; C/ATF	TAXREB67; MGC96460; CREB2; Atf-4; C/ATF
Mus musculus	RefSeq	ILMN_223919	ILMN_226300	ATF4	NM_009716.2	NM_009716.2		11911	121949820	NM_009716.2	Atf4	NP_033846.2	ILMN_1223734	002480692	S	553	TCGAGTTAAGCACATTCCTCGAATCCAGCAAAGCCCCACAACATGACCGA	15	+	80086687-80086728:80086729-80086736	15qE1	Mus musculus activating transcription factor 4 (Atf4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IC ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IGI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	TAXREB67; MGC96460; CREB2; Atf-4; C/ATF	TAXREB67; MGC96460; CREB2; Atf-4; C/ATF
Mus musculus	RefSeq	ILMN_200133	ILMN_200133	LOC384229	XM_357506.1	XM_357506.1			38080596	XM_357506.1	LOC384229		ILMN_2537704	002630601	S	189	TGTCACAGTGGAGCGAAACTGGTGGGAACCCAGAGGCATCGACAACAGGG										
Mus musculus	RefSeq	ILMN_208719	ILMN_208719	SLC41A2	NM_177388.3	NM_177388.3		338365	142349904	NM_177388.3	Slc41a2	NP_796362.1	ILMN_2588882	004050673	S	3971	GTGTGGACCAACTGTGAACTCTCCCCGTTCCTAAGGTCAGAGAGACTGTA	10	-	82694249-82694298	10qC1	Mus musculus solute carrier family 41, member 2 (Slc41a2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	A230035L05Rik; SLC41A1-L1	A230035L05Rik; SLC41A1-L1
Mus musculus	RefSeq	ILMN_197181	ILMN_197181	LOC241262	XM_140847.2	XM_140847.2			38074490	XM_140847.2	LOC241262		ILMN_2527205	007330437	S	287	GAGAAGAAGCAGACACAGTGCCATGGGCAGCACCTGATCGGCAGAACCAG										
Mus musculus	RefSeq	ILMN_197574	ILMN_197574	LOC330927	XM_284483.2	XM_284483.2			38076643	XM_284483.2	LOC330927		ILMN_2528604	004880088	S	893	GAAAAAGAAGTGTACATAATTTGTCATAACTCAGTAGCATGACCTGCCCC										
Mus musculus	RefSeq	ILMN_185516	ILMN_185516	V1RG9	NM_134210.1	NM_134210.1		171244	21717742	NM_134210.1	V1rg9	NP_598971.1	ILMN_1220012	002900180	S	763	CGTGTAATCTTTACAACCTACTCCAATGTTTCAGAGATTTGGAGAGTAAG	7	-	12845216-12845265	7qA1	Mus musculus vomeronasal 1 receptor, G9 (V1rg9), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_222107	ILMN_222107	SIRPA	NM_007547.2	NM_007547.2		19261	110626108	NM_007547.2	Sirpa	NP_031573.2	ILMN_2744683	003180368	S	982	TGTTCCTGGTGAACTCATCTGCTCATAGAGAGGACGTGGTGTTCACGTGC	2	+	129442148-129442197	2qF1	Mus musculus signal-regulatory protein alpha (Sirpa), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence IDA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IDA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a phosphorylated amino acid residue within a protein [goid 45309] [evidence IPI]	AI835480; CD172a; SIRP; SHPS-1; P84; SHP-1; Ptpns1; Bit	AI835480; CD172a; SIRP; SHPS-1; P84; SHP-1; Ptpns1; Bit
Mus musculus	RefSeq	ILMN_220510	ILMN_222107	SIRPA	NM_007547.2	NM_007547.2		19261	110626108	NM_007547.2	Sirpa	NP_031573.2	ILMN_2722996	003400646	S	3474	GCGCCCTGTGAGGAGTGGGATTTGTTTTTCTGTAGACCAGATGAGAAGGA	2	+	129457829-129457878	2qF1	Mus musculus signal-regulatory protein alpha (Sirpa), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IDA]	Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [evidence IDA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IDA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IDA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a phosphorylated amino acid residue within a protein [goid 45309] [evidence IPI]	AI835480; CD172a; SIRP; SHPS-1; P84; SHP-1; Ptpns1; Bit	AI835480; CD172a; SIRP; SHPS-1; P84; SHP-1; Ptpns1; Bit
Mus musculus	RefSeq	ILMN_211969	ILMN_211969	NEDD9	NM_017464.2	NM_017464.2		18003	31543317	NM_017464.2	Nedd9	NP_059492.2	ILMN_1223678	001070709	S	4219	TGGAGAGCAATTCACTGTGTCTGGCGTGTGGAAGAAGAGGGTCCTGAAGC	13	-	41321151-41321200	13qA3.3-qA4	Mus musculus neural precursor cell expressed, developmentally down-regulated gene 9 (Nedd9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E230025G09Rik	E230025G09Rik
Mus musculus	RefSeq	ILMN_211969	ILMN_211969	NEDD9	NM_017464.2	NM_017464.2		18003	31543317	NM_017464.2	Nedd9	NP_059492.2	ILMN_2654186	002570440	S	4221	GGAGAGCAATTCACTGTGTCTGGCGTGTGGAAGAAGAGGGTCCTGAAGCA	13	-	41321149-41321198	13qA3.3-qA4	Mus musculus neural precursor cell expressed, developmentally down-regulated gene 9 (Nedd9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E230025G09Rik	E230025G09Rik
Mus musculus	RefSeq	ILMN_236996	ILMN_236996	ODF4	NM_145746.1	NM_145746.1		252868	21919407	NM_145746.1	Odf4	NP_665689.1	ILMN_3060395	004780274	I	996	GGGGACCAGCTTTGCATTCCTCTTCCTCAACTTGGCTTGTCTGTGGCTCA	11	-	68735369-68735418	11qB3	Mus musculus outer dense fiber of sperm tails 4 (Odf4), mRNA.	A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; Structure or material found in the flagella of mammalian sperm that surrounds each of the nine microtubule doublets, giving a 9 + 9 + 2 arrangement rather than the 9 + 2 pattern usually seen. These dense fibers are stiff and noncontractile [goid 1520] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Oppo1; RP23-396M19.5	Oppo1; RP23-396M19.5
Mus musculus	RefSeq	ILMN_236996	ILMN_236996	ODF4	NM_145746.1	NM_145746.1		252868	21919407	NM_145746.1	Odf4	NP_665689.1	ILMN_3137813	000510008	A	374	GGGCTCCTGTACATCTGCGTATCTAAAAGCTGCCCCAGCTCAGACAACGG	11	-	68740024-68740073	11qB3	Mus musculus outer dense fiber of sperm tails 4 (Odf4), mRNA.	A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IDA]; Structure or material found in the flagella of mammalian sperm that surrounds each of the nine microtubule doublets, giving a 9 + 9 + 2 arrangement rather than the 9 + 2 pattern usually seen. These dense fibers are stiff and noncontractile [goid 1520] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Oppo1; RP23-396M19.5	Oppo1; RP23-396M19.5
Mus musculus	MEEBO	ILMN_221694	ILMN_221694	4932411G14RIK	scl43876.4.1_55				31343233	NM_177711	4932411G14Rik		ILMN_2776775	003450121	S	3484	CTCTAAAGTGCCAAGTCCCAGGTTCCACAATCAGGCCGCTGCTTTTGTTG										
Mus musculus	RefSeq	ILMN_198908	ILMN_261588	LOC628050	XR_003885.1	XR_003885.1		628050	94385411	XR_003885.1	LOC628050		ILMN_1237349	002510093	S	1393	CTGACCACGAAGATGAGGTTCCTTTTGTCTTTGGGTCCATGCTTTTTGGG				8qD3	PREDICTED: Mus musculus similar to carboxylesterase 2 (LOC628050), mRNA.					
Mus musculus	RefSeq	ILMN_188312	ILMN_188312	V1RG6	NM_134207.1	NM_134207.1		171241	21717728	NM_134207.1	V1rg6	NP_598968.1	ILMN_1245439	004860239	S	637	AGACAAGTCAAACATATCCACAGTGCTCAGCATGCTCTAAAAGACTCTCC	7	+	12466328-12466377	7qA1	Mus musculus vomeronasal 1 receptor, G6 (V1rg6), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a pheromone, a substance, or characteristic mixture of substances, that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process [goid 5550] [evidence ISS]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence ISS]		
Mus musculus	RefSeq	ILMN_194022	ILMN_212644	CENPO	NM_134046.5	NM_134046.5		52504	146149085	NM_134046.5	Cenpo	NP_598807.2	ILMN_2502641	001450543	S	2918	TGAGCAGGATGCCAGCCGAGGCGGAACGAAGCTGCCTGTGCTGGGGGCGG				12qA1.1	Mus musculus centromere protein O (Cenpo), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D12Ertd482e; 8430427C03Rik; 2810429O05Rik; MGC36863	D12Ertd482e; 8430427C03Rik; 2810429O05Rik; MGC36863
Mus musculus	RefSeq	ILMN_232739	ILMN_232739	MEGF11	NM_172522.1	NM_172522.1		214058	27369721	NM_172522.1	Megf11	NP_766110.1	ILMN_2821381	003420440	S	3313	AGGAAGTCTACAGGTGAAGCCAAAAAGCAAGCACCAAGTCCAGCCCCTGG	9	+	64498706-64498755	9qC	Mus musculus multiple EGF-like-domains 11 (Megf11), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			2410080H04Rik; D130061K05	2410080H04Rik; D130061K05
Mus musculus	RefSeq	ILMN_231679	ILMN_231679	PPFIA3	NM_029741.1	NM_029741.1		76787	58037460	NM_029741.1	Ppfia3	NP_084017.1	ILMN_3145484	002320400	A	3641	TTGATGATCCGTTTCGAATGGGAGTCAGGCGCCCTGCACCTGCGGAAAGG	7	-	52595125-52595174	7qB4	Mus musculus protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 (Ppfia3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			2410127E16Rik	2410127E16Rik
Mus musculus	RefSeq	ILMN_231679	ILMN_231679	PPFIA3	NM_029741.1	NM_029741.1		76787	58037460	NM_029741.1	Ppfia3	NP_084017.1	ILMN_3067259	000630735	I	4028	TGCATGGGAAAATCCCTCTGTCAACTATGCCGCTGGCGATGTGGCTGGGG	7	-	52594738-52594787	7qB4	Mus musculus protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 (Ppfia3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			2410127E16Rik	2410127E16Rik
Mus musculus	RefSeq	ILMN_213636	ILMN_213636	ISOC2B	NM_026158.2	NM_026158.2		67441	142374837	NM_026158.2	Isoc2b	NP_080434.1	ILMN_2639189	002030474	S	988	TTCACGAAGCGGGAAAAGGAGGGGGAACAAATGTCACAACTGGGACCCTG	7	-	4796589-4796638	7qA1	Mus musculus isochorismatase domain containing 2b (Isoc2b), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AI553388; 0610042E07Rik; Isoc2	AI553388; 0610042E07Rik; Isoc2
Mus musculus	RefSeq	ILMN_198403	ILMN_198403	LOC225922	XM_129237.1	XM_129237.1			20886296	XM_129237.1	LOC225922		ILMN_2531564	004570358	S	113	GTTGTTCTCAGGACTGGATGACGGTCAGTGTTAGTGCGTTTTCCCAGAAC										
Mus musculus	MEEBO	ILMN_212545	ILMN_212545	DAB2	scl013132.15_5	NM_023118.1			12963488	NM_023118.1	Dab2		ILMN_1243329	001940347	S	3235	TGACCCTGATGACATTATGCCCTACATTTTCCTTGAAGATCCTGATTTTA						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]	The process whereby cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes [goid 6907] [evidence IMP]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IMP]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IPI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_205046	ILMN_219481	APH1A	NM_146104.2	NM_146104.2		226548	133893006	NM_146104.2	Aph1a	NP_666216.1	ILMN_1217553	003710008	S	1749	GGACGTTAGGATAGAGATCCAGTGGGACCAGTCCCCAAGCATGCACTTCC	3	+	95701124-95701173	3qF2.1	Mus musculus anterior pharynx defective 1a homolog (C. elegans) (Aph1a), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence ISA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]	MGC36389; MGC7221; 6530402N02Rik	MGC36389; MGC7221; 6530402N02Rik
Mus musculus	RefSeq	ILMN_219481	ILMN_219481	APH1A	NM_146104.2	NM_146104.2		226548	133893006	NM_146104.2	Aph1a	NP_666216.1	ILMN_2750628	007510348	S	1966	TTTAATCAAGGTGATTGTGATTTTGACTAATAAAAAGGACTTTATAATTG	3	+	95701341-95701390	3qF2.1	Mus musculus anterior pharynx defective 1a homolog (C. elegans) (Aph1a), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence ISA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]	MGC36389; MGC7221; 6530402N02Rik	MGC36389; MGC7221; 6530402N02Rik
Mus musculus	RefSeq	ILMN_208706	ILMN_219481	APH1A	NM_146104.2	NM_146104.2		226548	133893006	NM_146104.2	Aph1a	NP_666216.1	ILMN_2588759	000780360	S	2608	TAGGCAGGCACGTGTCCTGCTAGGTAACCCTCTCTATACACCAGGGACCC	3	+	95701983-95702032	3qF2.1	Mus musculus anterior pharynx defective 1a homolog (C. elegans) (Aph1a), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence ISA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]	MGC36389; MGC7221; 6530402N02Rik	MGC36389; MGC7221; 6530402N02Rik
Mus musculus	RefSeq	ILMN_219481	ILMN_219481	APH1A	NM_146104.2	NM_146104.2		226548	133893006	NM_146104.2	Aph1a	NP_666216.1	ILMN_1232821	007040521	S	2254	CTGCCACTCAACAGACAGAGGAACTCTCCCACTCTTGAAAGCCACAAAAA	3	+	95701629-95701678	3qF2.1	Mus musculus anterior pharynx defective 1a homolog (C. elegans) (Aph1a), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence ISA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IMP]; Any process that activates or increases the activity of an enzyme [goid 43085] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence ISA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IMP]	MGC36389; MGC7221; 6530402N02Rik	MGC36389; MGC7221; 6530402N02Rik
Mus musculus	RefSeq	ILMN_210196	ILMN_232757	OLFR466	NM_146819.2	NM_146819.2		258816	121583650	NM_146819.2	Olfr466	NP_667030.2	ILMN_2769858	002850072	S	657	CATTTCAACAATATTGAAGATCCGCACAGTGCAGGGACGACAGAAAGCTT	13	+	65254190-65254239	13qB3	Mus musculus olfactory receptor 466 (Olfr466), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR209-1	MOR209-1
Mus musculus	RefSeq	ILMN_185759	ILMN_326855	LOC100046144	XM_001475907.1	XM_001475907.1		100046144	149258498	XM_001475907.1	LOC100046144	XP_001475957.1	ILMN_2429766	000510470	S	273	GAGGCTGCAAAAGAAGAGAACACATGAATGGGACCTGCAGAAAGGGTCAT					PREDICTED: Mus musculus similar to Defensin-related cryptdin 7 (LOC100046144), mRNA.					
Mus musculus	MEEBO	ILMN_215032	ILMN_215032	GP38	scl23564.6_587	NM_010329.1			6754041	NM_010329.1	Gp38		ILMN_2654754	001340446	S	1538	AGAAGATATTTCCAGTCTTCGTGACACGGGGACTCAGTGTTGCTGGGACA										
Mus musculus	RefSeq	ILMN_218812	ILMN_218812	TMEM43	NM_028766.2	NM_028766.2		74122	141801819	NM_028766.2	Tmem43	NP_083042.1	ILMN_2700505	003520634	S	2230	CCGGCCTCAAGCAGTTGCTGCAGAGTGGTTCTTTTTGCATTTAATGCCCA	6	+	91437832-91437881	6qD1	Mus musculus transmembrane protein 43 (Tmem43), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1200015A22Rik	1200015A22Rik
Mus musculus	MEEBO	ILMN_194045	ILMN_194045	ERN1	scl39446.25.1887_2				15284149	NM_023913	Ern1		ILMN_2502860	003360189	S	11	GCTCATTGATGAAGGCGACTTATGCTGAGCCAACCACAAATAAAGGTAGT						The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IDA]	Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks [goid 4521] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16891] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_223622	ILMN_223622	1700036D21RIK	NM_148940.2	NM_148940.2		73336	110625927	NM_148940.2	1700036D21Rik	NP_683742.2	ILMN_2837999	006330021	S	1669	TTGCTACACAACCTCCTGGGAGCAACCCTGTCTGGTGCCGCCTTCAACAG	9	+	110720348-110720397	9qF3	Mus musculus RIKEN cDNA 1700036D21 gene (1700036D21Rik), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	TESSP-4; Tessp4; AU043597; AU043574; 79H19A	TESSP-4; Tessp4; AU043597; AU043574; 79H19A
Mus musculus	RefSeq	ILMN_191790	ILMN_191790	TPM2	NM_009416.3	NM_009416.3		22004	133892876	NM_009416.3	Tpm2	NP_033442.2	ILMN_2487170	006370241	S	1968	GGAAGAGAACGTGGAGATACACCAGACCTTGGACCAGACCCTTCTGGAAC	4	-	43527664-43527713	4qB1	Mus musculus tropomyosin 2, beta (Tpm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A form of the tropomyosin dimer found associated with actin and the troponin complex in muscle thin filaments [goid 5862] [evidence TAS]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Trop-2; Tpm-2	Trop-2; Tpm-2
Mus musculus	RefSeq	ILMN_191790	ILMN_191790	TPM2	NM_009416.3	NM_009416.3		22004	133892876	NM_009416.3	Tpm2	NP_033442.2	ILMN_2482209	001070088	S	1075	CATGCACTGACCTCCACCCCTCCACTACTTAATAAACTCTGAACTTGGTC	4	-	43528557-43528606	4qB1	Mus musculus tropomyosin 2, beta (Tpm2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A form of the tropomyosin dimer found associated with actin and the troponin complex in muscle thin filaments [goid 5862] [evidence TAS]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Trop-2; Tpm-2	Trop-2; Tpm-2
Mus musculus	MEEBO	ILMN_222460	ILMN_222460	BAP1	scl46492.14_472	NM_027088.1			28076916	NM_027088.1	Bap1		ILMN_2749866	002370414	S	3073	CTTGCAAGGTACTCAGGGTAGGGACAGGGTTGAGAGGAGTTAGAACTTCT						The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISA]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence ISA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence ISA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]		
Mus musculus	MEEBO	ILMN_216148	ILMN_216148	4931413A09RIK	scl37765.6.3_5	XM_147407.2			38090610	XM_147407.2	4931413A09Rik		ILMN_2667856	004900553	S	1141	ACCTGGAGGCGCGAGAGAAACTGAACAGACCCTTGGTTCGCATGTATCAG										
Mus musculus	RefSeq	ILMN_209594	ILMN_209594	GABARAPL1	NM_020590.4	NM_020590.4		57436	141801743	NM_020590.4	Gabarapl1	NP_065615.1	ILMN_1236958	005690301	S	1456	CTTGGGTCTCACACGCACTGCAAATGCTAAGCGATGGCCAGCTGTCTCCC	6	+	129492032-129492081	6qF3	Mus musculus gamma-aminobutyric acid (GABA(A)) receptor-associated protein-like 1 (Gabarapl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence ISA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence ISA]	MNCb-0091; Apg8l; 9130422N19Rik; GECI; 3110025G09Rik; AI196471	MNCb-0091; Apg8l; 9130422N19Rik; GECI; 3110025G09Rik; AI196471
Mus musculus	RefSeq	ILMN_252149	ILMN_252149	GM854	NM_001033428.1	NM_001033428.1		333048	85701930	NM_001033428.1	Gm854	NP_001028600.1	ILMN_2940369	005890020	S	1778	CATGATGGACTGTGCCCTGGAACTGTGAACTAGAAGAGAGCCCTTCCCCC	5	+	113479517-113479566	5qF	Mus musculus gene model 854, (NCBI) (Gm854), mRNA.					
Mus musculus	RefSeq	ILMN_220036	ILMN_220036	DGKK	NM_177914.2	NM_177914.2		331374	50054140	NM_177914.2	Dgkk	NP_808582.2	ILMN_2874399	001430719	S	5375	GCGTGCTCAATTACCTTGCTCAGTCCAATGGCTGGTTCACTGAGGTGCAC				XqA1.1	Mus musculus diacylglycerol kinase kappa (Dgkk), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Gm360	Gm360
Mus musculus	RefSeq	ILMN_198527	ILMN_220036	DGKK	NM_177914.2	NM_177914.2		331374	50054140	NM_177914.2	Dgkk	NP_808582.2	ILMN_1222879	003930064	S	3783	GGGGACAGGCTCTCTATGAATGGCCTGGGAGCTATGAGAATGTATGGGAG	X	+	6522447-6522496	XqA1.1	Mus musculus diacylglycerol kinase kappa (Dgkk), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	Gm360	Gm360
Mus musculus	RefSeq	ILMN_213597	ILMN_259234	1300001I01RIK	NM_001081158.2	NM_001081158.2		74148	148539945	NM_001081158.2	1300001I01Rik	NP_001074627.1	ILMN_1217040	001050114	S	4925	TCTCCCCATTTAAACCTGAGCTGCCTAATGCACAGTTGGGTAAGGGGTGG				11qB5	Mus musculus RIKEN cDNA 1300001I01 gene (1300001I01Rik), mRNA.			Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	mKIAA0664; RP23-194P5.1	mKIAA0664; RP23-194P5.1
Mus musculus	MEEBO	ILMN_216617	ILMN_216617	E130307D12	scl00224903.1_12	XM_128715.5			38082724	XM_128715.5	E130307D12		ILMN_2673268	001780139	S	2755	AAGGTGGTGAGAGGAGCATGTCTGGCCACTCGGGGCCTGGTCACATGATG										
Mus musculus	RefSeq	ILMN_196719	ILMN_319054	LOC100038894	XM_001471776.1	XM_001471776.1		100038894	149255109	XM_001471776.1	LOC100038894	XP_001471826.1	ILMN_1252295	002570707	S	1042	CCTTCCCTGTGGAGACTGGACAGATCTTCTCTGGTCCCGCAAAACTTGAA	6	-	129993809-129993858	6qF3	PREDICTED: Mus musculus hypothetical protein LOC100038894 (LOC100038894), mRNA.					
Mus musculus	RefSeq	ILMN_200539	ILMN_200539	LOC384342	XM_357589.1	XM_357589.1			38083453	XM_357589.1	LOC384342		ILMN_1224374	002450370	S	294	ACATGACGTGGAAGTGCAGGTGTTGAGTACAGCCAGCCGTCACCTTGCGC										
Mus musculus	RefSeq	ILMN_223217	ILMN_223217	OLFR1450	NM_146371.1	NM_146371.1		258368	22129558	NM_146371.1	Olfr1450	NP_666483.1	ILMN_2852196	002350524	S	126	CCTGGGCATGATTGTGTTGATCTGGTTCGACTCCCATCTCCATACCCCCA	19	+	13028206-13028255	19qA	Mus musculus olfactory receptor 1450 (Olfr1450), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR202-33	MOR202-33
Mus musculus	RefSeq	ILMN_223217	ILMN_223217	OLFR1450	NM_146371.1	NM_146371.1		258368	22129558	NM_146371.1	Olfr1450	NP_666483.1	ILMN_1239694	000990132	S	621	TTTTTTTCTCTGATAGTTATCTTGACCTCCTATGCATTTATATTCATCGC	19	+	13028701-13028750	19qA	Mus musculus olfactory receptor 1450 (Olfr1450), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR202-33	MOR202-33
Mus musculus	Riken	ILMN_202170	ILMN_202170	3110031I02RIK	ri|3110031I02|ZX00071P11|AK014104|1298					AK014104	3110031I02Rik		ILMN_2547548	005860196	S	817	GAGACATAGCCGCACCCTCAACTCCTGGACTCATGCTGTTTCTAACCACC										
Mus musculus	RefSeq	ILMN_216914	ILMN_216914	ANKRD17	NM_030886.2	NM_030886.2		81702	40549396	NM_030886.2	Ankrd17	NP_112148.2	ILMN_1221440	005130672	S	3026	GTCCCTTGCCTCCAGGGTCCATCGCAAATCTTACAGAACTTCAAGGAGTG	5	-	90712012-90712061	5qE1	Mus musculus ankyrin repeat domain 17 (Ankrd17), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU040470; Foe; Gtar; 4933425K22Rik; Mask; AA516750; mKIAA0697; A130069E23Rik; AA407558; A930008M01	AU040470; Foe; Gtar; 4933425K22Rik; Mask; AA516750; mKIAA0697; A130069E23Rik; AA407558; A930008M01
Mus musculus	RefSeq	ILMN_184354	ILMN_184354	V1RE9	NM_145842.2	NM_145842.2		252904	31560757	NM_145842.2	V1re9	NP_665841.1	ILMN_1233229	007200575	S	1580	TGATGAGCCATTACTCTTTTATGCCCAAACTCAGTTTGACCTGGATAAGG	7	-	11165207-11165256	7qA1	Mus musculus vomeronasal 1 receptor, E9 (V1re9), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196467	ILMN_196467	A330044P14RIK	XM_207240.3	XM_207240.3			38081003	XM_207240.3	A330044P14Rik		ILMN_2726138	005130296	S	2605	ATTCCCATTATCAGAATTTATTGGTATAAAAATTATACTGTCATATGTCA										
Mus musculus	RefSeq	ILMN_196467	ILMN_196467	A330044P14RIK	XM_207240.3	XM_207240.3			38081003	XM_207240.3	A330044P14Rik		ILMN_1218448	002750538	S	1103	GATGGGGCTCAGAGCTGAACAAAGAATTCTCCCCCGAGGAATACCGAAAG										
Mus musculus	MEEBO	ILMN_187551	ILMN_187551	SSH1	scl0100997.1_86				47271412	NM_198109	Ssh1		ILMN_2445100	004260598	S	11	TTGCTGCAAATCATGGGGTACAGCTCACCCCAGAGGAGCCTCACCAGACT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186347	ILMN_234975	AKAP1	NM_001042541.1	NM_001042541.1		11640	110347476	NM_001042541.1	Akap1	NP_001036006.1	ILMN_2775655	005290670	S	2405	GTGGCGAGCCCAAGTAGTGGCTTCCTATGAGGAGACCAATGAGGTGGAGA	11	-	88696454-88696503	11qC	Mus musculus A kinase (PRKA) anchor protein 1 (Akap1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84
Mus musculus	RefSeq	ILMN_186347	ILMN_234975	AKAP1	NM_001042541.1	NM_001042541.1		11640	110347476	NM_001042541.1	Akap1	NP_001036006.1	ILMN_1233969	001570390	S	2090	CTTGATTGGGAAGAAGTTTAAGGAACTGAACCTCACCAATATCTATGCGC	11	-	88700290-88700339	11qC	Mus musculus A kinase (PRKA) anchor protein 1 (Akap1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84
Mus musculus	RefSeq	ILMN_234975	ILMN_234975	AKAP1	NM_001042541.1	NM_001042541.1		11640	110347476	NM_001042541.1	Akap1	NP_001036006.1	ILMN_3068062	001470538	I	13	GGGCACGTCGTTGCGCGTCCTCAGTATTTAATGTCTCTGTGTTCGCCCGG	11	-	88725838-88725887	11qC	Mus musculus A kinase (PRKA) anchor protein 1 (Akap1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84
Mus musculus	RefSeq	ILMN_234975	ILMN_234975	AKAP1	NM_001042541.1	NM_001042541.1		11640	110347476	NM_001042541.1	Akap1	NP_001036006.1	ILMN_3146196	002750079	A	3299	CCCAGTGAGTGGGGGGAAGGGCAGCTGTTATCTTGCCAAGCCTGGTTGTA	11	-	88692515-88692564	11qC	Mus musculus A kinase (PRKA) anchor protein 1 (Akap1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84
Mus musculus	RefSeq	ILMN_186347	ILMN_234975	AKAP1	NM_001042541.1	NM_001042541.1		11640	110347476	NM_001042541.1	Akap1	NP_001036006.1	ILMN_1243858	000650735	S	3701	TTAAGAATAACTTAAGGATCTTGGACTTTACATAAATCTTGAATTGTATA	11	-	88692113-88692162	11qC	Mus musculus A kinase (PRKA) anchor protein 1 (Akap1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84
Mus musculus	RefSeq	ILMN_186347	ILMN_234975	AKAP1	NM_001042541.1	NM_001042541.1		11640	110347476	NM_001042541.1	Akap1	NP_001036006.1	ILMN_1219231	006510673	S	2669	CAGTGCGACTGGCCTTCCTCTGATTCAGCTATGGAGTGTGGTTGGAGATG	11	-	88693623-88693672	11qC	Mus musculus A kinase (PRKA) anchor protein 1 (Akap1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84	C76494; AKAP121; C81186; Akap; AKAP84; S-AKAP84
Mus musculus	RefSeq	ILMN_210260	ILMN_210260	PTH	NM_020623.1	NM_020623.1		19226	10181173	NM_020623.1	Pth	NP_065648.1	ILMN_2786030	002970615	S	346	TGCCAGAGATGGCAGTCACCAGAAGCCCACCAAGAAGGAGGAAAATGTCC	7	-	113177077-113177126	7qF1	Mus musculus parathyroid hormone (Pth), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence ISO]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30819] [evidence ISO]; Any process that activates or increases the frequency, rate or extent of signal transduction [goid 9967] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence ISO]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence ISO]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IDA]	MGC117651; Pthp	MGC117651; Pthp
Mus musculus	RefSeq	ILMN_185836	ILMN_259946	LOC676974	XM_001003154.1	XM_001003154.1		676974	94380202	XM_001003154.1	LOC676974	XP_001003154.1	ILMN_2648100	004590358	S	679	TGGGACCCACATTGCCAAAACACTGGCCAGCTTGTCCCCTGAGACTTCCC					PREDICTED: Mus musculus similar to Glucose phosphate isomerase 1, transcript variant 2 (LOC676974), mRNA.					
Mus musculus	RefSeq	ILMN_208901	ILMN_208901	NT5M	NM_134029.2	NM_134029.2		103850	118129938	NM_134029.2	Nt5m	NP_598790.1	ILMN_2987854	004560349	S	895	GGCCTTAACCTGATAGTTGGGACGGGGCTAGAAGAAAGATGCGTGTTCTC	11	+	59689624-59689673	11qB1.3	Mus musculus 5',3'-nucleotidase, mitochondrial (Nt5m), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways involving any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside) [goid 9120] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IDA]	dNT-2; 2010013E09Rik; AI846937	dNT-2; 2010013E09Rik; AI846937
Mus musculus	RefSeq	ILMN_208901	ILMN_208901	NT5M	NM_134029.2	NM_134029.2		103850	118129938	NM_134029.2	Nt5m	NP_598790.1	ILMN_1216748	000130369	S	1214	CTGGTGTTCTTAGATCCCATTAACAGCCCAGAAAGGAGTCAGCAGGTGTG	11	+	59689943-59689992	11qB1.3	Mus musculus 5',3'-nucleotidase, mitochondrial (Nt5m), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways involving any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside) [goid 9120] [evidence IC ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IDA]	dNT-2; 2010013E09Rik; AI846937	dNT-2; 2010013E09Rik; AI846937
Mus musculus	MEEBO	ILMN_190629	ILMN_190629	9030205G03RIK	scl077077.2_203						9030205G03Rik		ILMN_2471877	001500543	S	13	CGTCTATGGCACCCACCGTGCCACCGTGAAGTGGGAAACACAGCTAAATG										
Mus musculus	RefSeq	ILMN_201279	ILMN_201279	LOC382361	XM_356461.1	XM_356461.1			38090453	XM_356461.1	LOC382361		ILMN_1218706	001300703	S	285	AGGTGAAGTTATGCTGACTTCTCAGTCAGTGGAACAGGTGGAGGAGGACC										
Mus musculus	RefSeq	ILMN_189148	ILMN_248775	LRP1B	NM_053011.2	NM_053011.2		94217	153792246	NM_053011.2	Lrp1b	NP_443737.2	ILMN_2611536	001030500	S	14559	GGCATCAGAGAAACAGTAGCATAATGAAGGACACTTTTCTATGCTGTATA				2qB	Mus musculus low density lipoprotein-related protein 1B (deleted in tumors) (Lrp1b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence IDA]	9630004P12Rik; LRP-DIT	9630004P12Rik; LRP-DIT
Mus musculus	Riken	ILMN_206716	ILMN_206716	A630098G22RIK	ri|A630098G22|PX00148N10|AK080403|717					AK080403	A630098G22Rik		ILMN_2582171	004900288	S	509	CTTGCCTGCTGTCAATATGGGCACATCTTTAGGAGACCTAAGTAAGACTT										
Mus musculus	RefSeq	ILMN_211730	ILMN_211730	NGFRAP1	NM_009750.1	NM_009750.1		12070	6753185	NM_009750.1	Ngfrap1	NP_033880.1	ILMN_2943599	000360491	S	545	GACTTCGGTCATTCCCCCCTGAGATCCATACTGTGACTCCCGCTGTAGCC	X	+	132806214-132806263	XqF1	Mus musculus nerve growth factor receptor (TNFRSF16) associated protein 1 (Ngfrap1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA];  [goid 8625] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a death receptor [goid 5123] [evidence IPI]	Bex3; Nade; DXWsu67e; Gcap27; AL033356	Bex3; Nade; DXWsu67e; Gcap27; AL033356
Mus musculus	MEEBO	ILMN_188899	ILMN_188899	5530601I19RIK	scl31888.5_427				21313449	NM_027797	5530601I19Rik		ILMN_2622780	007200463	S	1169	GGATTACTGAGTTCTGTGCTTCCCACGCTGGCCCTGGGTCTTGTTCTGAG										
Mus musculus	RefSeq	ILMN_216893	ILMN_216893	2310057N15RIK	NM_027170.1	NM_027170.1		69696	13386207	NM_027170.1	2310057N15Rik	NP_081446.1	ILMN_1215300	001770438	S	779	CCTCTTCTACTTGTTAGAATCTTAATGTGTAATCCCTAGTATGCCTCAAA	16	-	88773623-88773672	16qC3.3	Mus musculus RIKEN cDNA 2310057N15 gene (2310057N15Rik), mRNA.				MGC129405; Krtap13-1	MGC129405; Krtap13-1
Mus musculus	RefSeq	ILMN_209615	ILMN_209615	PCYT2	NM_024229.2	NM_024229.2		68671	31980841	NM_024229.2	Pcyt2	NP_077191.2	ILMN_2939303	000150630	S	1448	GGTAGCTAGCCCAATGATGTGGCCCGTGGACAGGATAAGCAGATGCACCT	11	-	120471738-120471787	11qE2	Mus musculus phosphate cytidylyltransferase 2, ethanolamine (Pcyt2), mRNA.		The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: CTP + ethanolamine phosphate = diphosphate + CDP-ethanolamine [goid 4306] [evidence IEA]	ET; 1110033E03Rik	ET; 1110033E03Rik
Mus musculus	RefSeq	ILMN_209615	ILMN_209615	PCYT2	NM_024229.2	NM_024229.2		68671	31980841	NM_024229.2	Pcyt2	NP_077191.2	ILMN_2694038	007100328	S	1086	TATCAGATTGACAGTGGCAGTGACCTCACTACAGACCTGATTGTGCAGAG	11	-	120472204-120472253	11qE2	Mus musculus phosphate cytidylyltransferase 2, ethanolamine (Pcyt2), mRNA.		The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: CTP + ethanolamine phosphate = diphosphate + CDP-ethanolamine [goid 4306] [evidence IEA]	ET; 1110033E03Rik	ET; 1110033E03Rik
Mus musculus	RefSeq	ILMN_209615	ILMN_209615	PCYT2	NM_024229.2	NM_024229.2		68671	31980841	NM_024229.2	Pcyt2	NP_077191.2	ILMN_2597485	006380678	S	869	GGGCAAGAACTACCCCATCATGAACCTGCACGAGCGGACTCTCAGTGTGC	11	-	120472952-120473001	11qE2	Mus musculus phosphate cytidylyltransferase 2, ethanolamine (Pcyt2), mRNA.		The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: CTP + ethanolamine phosphate = diphosphate + CDP-ethanolamine [goid 4306] [evidence IEA]	ET; 1110033E03Rik	ET; 1110033E03Rik
Mus musculus	RefSeq	ILMN_190626	ILMN_327917	LOC100044150	XM_001471789.1	XM_001471789.1		100044150	149260555	XM_001471789.1	LOC100044150	XP_001471839.1	ILMN_2712084	001740707	S	1621	TTCAGTGTGTTTGTCATTACAATGAGCCAAACTGCATATGTGTTGAGTTG					PREDICTED: Mus musculus hypothetical protein LOC100044150 (LOC100044150), mRNA.					
Mus musculus	MEEBO	ILMN_208937	ILMN_208937	A330023F24RIK	scl15736.5.1_234	NM_177154.2			31342926	NM_177154.2	A330023F24Rik		ILMN_1213010	004570041	S	2330	CACAATGCTTCTCCGGTTGCTTAGGATAAACATCCTCCCCCAAGAGACAC										
Mus musculus	MEEBO	ILMN_208937	ILMN_208937	A330023F24RIK	scl15736.5.1_234	NM_177154.2			31342926	NM_177154.2	A330023F24Rik		ILMN_2590972	002650445	S	2343	CGGTTGCTTAGGATAAACATCCTCCCCCAAGAGACACTGAGGGCGAACAC										
Mus musculus	RefSeq	ILMN_190094	ILMN_190094	ZNRF1	NM_133206.2	NM_133206.2		170737	56711336	NM_133206.2	Znrf1	NP_573469.1	ILMN_1232073	006280746	S	2698	GCCAAAAAAGAGGAAGATGAAGAGCCCATCGTGGACACTTGCCCTCCCCC	8	+	114147268-114147317	8qE1	Mus musculus zinc and ring finger 1 (Znrf1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rnf42; B830022L21Rik; nin283; Zrfp1; MGC101991	Rnf42; B830022L21Rik; nin283; Zrfp1; MGC101991
Mus musculus	RefSeq	ILMN_206402	ILMN_190094	ZNRF1	NM_133206.2	NM_133206.2		170737	56711336	NM_133206.2	Znrf1	NP_573469.1	ILMN_1232894	000150053	S	2064	ACCGTGCGATGGAGCGGCAACTCTCAGCAAGATGAAGCGGGACTGACTTC	8	+	114146634-114146683	8qE1	Mus musculus zinc and ring finger 1 (Znrf1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rnf42; B830022L21Rik; nin283; Zrfp1; MGC101991	Rnf42; B830022L21Rik; nin283; Zrfp1; MGC101991
Mus musculus	RefSeq	ILMN_191091	ILMN_252251	D030028A08RIK	NR_003293.2	NR_003293.2		319371	141801253	NR_003293.2	D030028A08Rik		ILMN_2476005	005670332	S	1561	TGAGCTGGTAGCCTGCCTTAGCACAAGCCTAGAGGCTCTGCCCCAATGAA	11	+	96825159-96825208	11qD	Mus musculus RIKEN cDNA D030028A08 gene (D030028A08Rik), non-coding RNA.					
Mus musculus	RefSeq	ILMN_194511	ILMN_252251	D030028A08RIK	NR_003293.2	NR_003293.2		319371	141801253	NR_003293.2	D030028A08Rik		ILMN_1214817	001230243	S	1961	CTGATCTGACTGTGTAGGTCATAGACTCAGCAGGGCTAACAACTACATGG	11	+	96825559-96825608	11qD	Mus musculus RIKEN cDNA D030028A08 gene (D030028A08Rik), non-coding RNA.					
Mus musculus	Riken	ILMN_204904	ILMN_204904	A530092L01RIK	ri|A530092L01|PX00143M12|AK041221|2578					AK041221	A530092L01Rik		ILMN_1214712	001300044	S	2443	CAGACCCAGGTTCAGTTCCCAGCACCCCAGCAGCGCAAAGCCATCTGTAA										
Mus musculus	RefSeq	ILMN_192057	ILMN_258819	HSD3B7	NM_133943.2	NM_133943.2		101502	100817044	NM_133943.2	Hsd3b7	NP_598704.2	ILMN_1260456	002470242	S	1751	GACATTGTTAGCTTCCTCCCCTAGGATGCCAACCTGTATCTGGCCAAGCC	7	+	134947244-134947293	7qF3	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 (Hsd3b7), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BB098564; AI195443	BB098564; AI195443
Mus musculus	RefSeq	ILMN_258819	ILMN_258819	HSD3B7	NM_133943.2	NM_133943.2		101502	100817044	NM_133943.2	Hsd3b7	NP_598704.2	ILMN_3114124	005890494	A	1560	ACGCTGGTCTGCTTACTTCAGCTACCATTTTCAGACCTGGCTCCTGCCAC	7	+	134947053-134947102	7qF3	Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 (Hsd3b7), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BB098564; AI195443	BB098564; AI195443
Mus musculus	Riken	ILMN_201878	ILMN_201878	4921533J23RIK	ri|4921533J23|PX00015B19|AK014997|775					AK014997	4921533J23Rik		ILMN_2545299	001780113	S	481	CATATCCATCTGGTACTTCAGCCACACTGGTGAAAAGTGGAGAGTGTTGC										
Mus musculus	RefSeq	ILMN_213256	ILMN_213256	ARL9	NM_206935.1	NM_206935.1		384185	46049038	NM_206935.1	Arl9	NP_996818.1	ILMN_2635251	001990026	S	27	GTGTGACCGGGTAGCCTGGGTAGAAAATAAGCAGATCCTAGTACTAGGTC	5	+	77433106-77433124:77435497-77435527	5qC3.3	Mus musculus ADP-ribosylation factor-like 9 (Arl9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700110A09Rik	1700110A09Rik
Mus musculus	Riken	ILMN_202101	ILMN_202101	2810031J10RIK	ri|2810031J10|ZX00065C05|AK012846|702					AK012846	2810031J10Rik		ILMN_2547002	000520414	S	488	ATGGTGGCCGTGGTGTGGGAGGGGCTTCGCTGGACTATGCTTCTCAGCTT										
Mus musculus	MEEBO	ILMN_188042	ILMN_188042	C230082I21RIK	scl19373.1.1_275						C230082I21Rik		ILMN_1248824	004730040	S	12	GTGTTGAATATGTTGGACTCTGCCATAGACTCCTTGTTTGGCTGCTGCAC										
Mus musculus	Riken	ILMN_206939	ILMN_206939	D430044H24RIK	ri|D430044H24|PX00195L07|AK085150|2140					AK085150	D430044H24Rik		ILMN_2583829	006400288	S	1977	TGGCCACGGGCCTTTGAGTCCTACCACAGACAGAACCACAGACGGATGTG										
Mus musculus	RefSeq	ILMN_211262	ILMN_227024	0610037P05RIK	NM_025345.2	NM_025345.2		66086	31560259	NM_025345.2	0610037P05Rik	NP_079621.1	ILMN_2717539	006860170	S	999	TTGAAAAAATATCTAAAGGAATATTAAAACCAGAACTTAATTTATATGAA	16	-	14299710-14299759	16qA1	Mus musculus RIKEN cDNA 0610037P05 gene (0610037P05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_211262	ILMN_227024	0610037P05RIK	NM_025345.2	NM_025345.2		66086	31560259	NM_025345.2	0610037P05Rik	NP_079621.1	ILMN_1230077	006480132	S	258	CCATTGGACAGACAGTTTCTCATCCGTGAACTAAATGCCTTTGAAGAATC	16	-	14311154-14311203	16qA1	Mus musculus RIKEN cDNA 0610037P05 gene (0610037P05Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218939	ILMN_242231	MXRA7	NM_026280.2	NM_026280.2		67622	142345537	NM_026280.2	Mxra7	NP_080556.1	ILMN_2702193	005860367	S	1428	TACTTCTTATCACCCCACTGGCCAGAAAGTTCATAGGCTGAGCAGACTTG	11	-	116664961-116665010	11qE2	Mus musculus matrix-remodelling associated 7 (Mxra7), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			1810057P16Rik; E130302J09Rik	1810057P16Rik; E130302J09Rik
Mus musculus	RefSeq	ILMN_199690	ILMN_199690	LOC383816	XM_357275.1	XM_357275.1			38076181	XM_357275.1	LOC383816		ILMN_2536130	002340730	S	585	TCGGCTGGACGTTGGCGATAACAAGCAGGTTACTGGAAAAGAGACAGATG										
Mus musculus	MEEBO	ILMN_219031	ILMN_219031	D530004J12RIK	scl30001.15.1_37	XM_144699.2			38084205	XM_144699.2	D530004J12Rik		ILMN_2703364	000070035	S	2988	TCACCAGCTAGGGCAGAATCAGGTCCGGGTCCTTCACTCAGTCATGTTGG										
Mus musculus	RefSeq	ILMN_213628	ILMN_213628	CNN1	NM_009922.3	NM_009922.3		12797	142347862	NM_009922.3	Cnn1	NP_034052.2	ILMN_1221148	005550544	S	2118	CCCCAGTTCCTACATGATGAAGGACCAACTCCATTAAACTGCCTTCCACC	9	+	21913824-21913873	9qA3	Mus musculus calponin 1 (Cnn1), mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	CnnI; CN	CnnI; CN
Mus musculus	RefSeq	ILMN_215953	ILMN_225556	ALKBH3	NM_026944.1	NM_026944.1		69113	110625725	NM_026944.1	Alkbh3	NP_081220.1	ILMN_2665597	005340528	S	502	CGCAACCAAGACTTACAGCATGGTATGGAGAGCTTCCTTACACTTACTCG	2	-	93841608-93841657	2qE1	Mus musculus alkB, alkylation repair homolog 3 (E. coli) (Alkbh3), mRNA. XM_924276	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Hydroxylase, with 2-oxoglutarate as one donor, and incorporation or reduction of one atom each of oxygen into both donors [goid 10302] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IDA]; Catalysis of the reaction: methyl-dCpdG DNA + H2O = dCpdG DNA + methanol. This reaction is the hydrolytic removal of the methyl group on the 5 position of cytosine in DNA [goid 51747] [evidence IDA]	mABH3; Abh3; 1700108H04Rik; 1810020C19Rik	mABH3; Abh3; 1700108H04Rik; 1810020C19Rik
Mus musculus	RefSeq	ILMN_215953	ILMN_225556	ALKBH3	NM_026944.1	NM_026944.1		69113	110625725	NM_026944.1	Alkbh3	NP_081220.1	ILMN_2699294	001010477	S	1115	GAGCTGCCAGCACGTCACCTTGTCAACATGTCTACTACAGGAACACTTAC	2	-	93820857-93820906	2qE1	Mus musculus alkB, alkylation repair homolog 3 (E. coli) (Alkbh3), mRNA. XM_924276	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Hydroxylase, with 2-oxoglutarate as one donor, and incorporation or reduction of one atom each of oxygen into both donors [goid 10302] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IDA]; Catalysis of the reaction: methyl-dCpdG DNA + H2O = dCpdG DNA + methanol. This reaction is the hydrolytic removal of the methyl group on the 5 position of cytosine in DNA [goid 51747] [evidence IDA]	mABH3; Abh3; 1700108H04Rik; 1810020C19Rik	mABH3; Abh3; 1700108H04Rik; 1810020C19Rik
Mus musculus	RefSeq	ILMN_187788	ILMN_187788	WARS2	NM_027462.4	NM_027462.4		70560	146141150	NM_027462.4	Wars2	NP_081738.2	ILMN_1213053	005570201	S	3303	AGGCCAATTGCCTGTTTAGCTCTGTGGTCTCTACCTCCTAGCAATGCTTC				3qF2.2	Mus musculus tryptophanyl tRNA synthetase 2 (mitochondrial) (Wars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IDA]; The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6436] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophanyl-tRNA(Trp) [goid 4830] [evidence IEA]	AI413375; 5730427B17Rik; TrpRS; 9430020O07Rik	AI413375; 5730427B17Rik; TrpRS; 9430020O07Rik
Mus musculus	RefSeq	ILMN_187788	ILMN_187788	WARS2	NM_027462.4	NM_027462.4		70560	146141150	NM_027462.4	Wars2	NP_081738.2	ILMN_1225488	002260630	S	4279	GGCGGCCCCTTGATGGATTGGTTAGGACCTGCTAACATTGACAAGGATAA				3qF2.2	Mus musculus tryptophanyl tRNA synthetase 2 (mitochondrial) (Wars2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IDA]; The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6436] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophanyl-tRNA(Trp) [goid 4830] [evidence IEA]	AI413375; 5730427B17Rik; TrpRS; 9430020O07Rik	AI413375; 5730427B17Rik; TrpRS; 9430020O07Rik
Mus musculus	RefSeq	ILMN_193061	ILMN_193061	TXNDC4	NM_029572.2	NM_029572.2		76299	88900513	NM_029572.2	Txndc4	NP_083848.1	ILMN_2493747	007650653	S	1352	GGATCGAGATGAGCTGTAAAAACTCAAGAATACTGCAAGCCTTTCCACAC	4	-	48207448-48207479:48207480-48207497	4qB1	Mus musculus thioredoxin domain containing 4 (endoplasmic reticulum) (Txndc4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence ISO]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence ISO]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		AI849526; 1110001E24Rik; AL033348; Erp44	AI849526; 1110001E24Rik; AL033348; Erp44
Mus musculus	RefSeq	ILMN_190113	ILMN_190113	TRFP	NM_020048.2	NM_020048.2		56771	31981083	NM_020048.2	Trfp	NP_064432.1	ILMN_2873729	006480343	S	1669	GCCAGCGCATCTGGGTAGTGGCTCTGAGGTACTGGTCATTCTTGTCTCCT	17	+	47087238-47087287	17qC	Mus musculus Trf (TATA binding protein-related factor)-proximal protein homolog (Drosophila) (Trfp), mRNA.				2410115I17Rik; AU018348; 1110011O05Rik	2410115I17Rik; AU018348; 1110011O05Rik
Mus musculus	RefSeq	ILMN_241772	ILMN_241772	9530096D07RIK	NM_001081651.1	NM_001081651.1		242681	126116578	NM_001081651.1	9530096D07Rik	NP_001075120.1	ILMN_2836540	002650528	S	396	GCCACAAGTGTGACCTGAACACCCGATGCGTATCCTCTCAGGAAGCAGAG	4	-	131858398-131858447	4qD2.3	Mus musculus RIKEN cDNA 9530096D07 gene (9530096D07Rik), mRNA.			Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rab42	Rab42
Mus musculus	RefSeq	ILMN_195986	ILMN_241772	9530096D07RIK	NM_001081651.1	NM_001081651.1		242681	126116578	NM_001081651.1	9530096D07Rik	NP_001075120.1	ILMN_1249234	001050240	S	576	ACAAGGACTGGGCGGGTGTCCGGCTCCTCCATAGATCTCCAAACCCTAGA	4	-	131858218-131858267	4qD2.3	Mus musculus RIKEN cDNA 9530096D07 gene (9530096D07Rik), mRNA.			Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	Rab42	Rab42
Mus musculus	RefSeq	ILMN_255016	ILMN_255016	TTN	NM_028004.2	NM_028004.2		22138	77812698	NM_028004.2	Ttn	NP_082280.2	ILMN_3128792	004860465	A	81585	GGCCATCCCCTCGTCTAACCAAGCTATGCAAGTATTCCTATGCCAGAGCG	2	-	76542337-76542386	2qC3	Mus musculus titin (Ttn), transcript variant N2-B, mRNA.	A filament of myosin found in a muscle cell of any type [goid 5859] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence IDA]	The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Anterior movement of an organism, following the direction of the head of the animal [goid 43056] [evidence IMP]; The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle [goid 55002] [evidence IMP]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik	shru; 2310074I15Rik; 2310057K23Rik; AV006427; D330041I19Rik; mdm; D830007G01Rik; 2310036G12Rik; 1100001C23Rik
Mus musculus	RefSeq	ILMN_222292	ILMN_222292	OLFR1459	NM_146689.1	NM_146689.1		258684	33239133	NM_146689.1	Olfr1459	NP_666900.1	ILMN_2747519	002690719	S	678	GCATTCAGCTTCAGGATATTGTAAAGCTATCTCCACATGTGCCTCACACT	19	-	13220420-13220469	19qA	Mus musculus olfactory receptor 1459 (Olfr1459), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-17	MOR202-17
Mus musculus	RefSeq	ILMN_196083	ILMN_246383	EG627352	XM_894313.3	XM_894313.3		627352	149270552	XM_894313.3	EG627352	XP_899406.1	ILMN_2683732	000510438	S	1601	GCTGCAGTTTTATGGAAAAGTCAATCTTGTAGGAGTTGTTTTTCAGATCT	19	+	41601375-41601424	19qC3	PREDICTED: Mus musculus predicted gene, EG627352 (EG627352), mRNA.					
Mus musculus	RefSeq	ILMN_217190	ILMN_217190	RHBDD1	NM_029777.2	NM_029777.2		76867	31541966	NM_029777.2	Rhbdd1	NP_084053.2	ILMN_2680086	001580504	S	3074	CTGCACCAAGTCATGTCTGTGGTTCTGAGTGACCCTAGACCACGGCCTGT	1	+	82441576-82441625	1qC5	Mus musculus rhomboid domain containing 1 (Rhbdd1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	4930418P06Rik; MGC7809	4930418P06Rik; MGC7809
Mus musculus	MEEBO	ILMN_218462	ILMN_218462	2010110P09RIK	scl32097.7.1_17	XM_355937.1			38087402	XM_355937.1	2010110P09Rik		ILMN_2696163	006770743	S	938	AAGGAAGTTGGAAGAATGTGTGCTGAAGTCTCATTTGCTCTCAGATTTGT						The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISO]	Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence ISO]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence ISO]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]		
Mus musculus	RefSeq	ILMN_220608	ILMN_220608	ACIN1	NM_023190.2	NM_023190.2		56215	146231984	NM_023190.2	Acin1	NP_075679.2	ILMN_2770667	004220408	S	2377	CACACAGCCTCAAACCTCAGAGACTCAGATCTCTCATCTGCTAGAATCAG				14qC3	Mus musculus apoptotic chromatin condensation inducer 1 (Acin1), transcript variant 2, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence ISS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2610036I19Rik; acinusL; 2610510L13Rik; mKIAA0670; acinusS; ACN; C79325; Acinus	2610036I19Rik; acinusL; 2610510L13Rik; mKIAA0670; acinusS; ACN; C79325; Acinus
Mus musculus	RefSeq	ILMN_184785	ILMN_228685	LOC676640	XM_001003712.1	XM_001003712.1		676640	94388877	XM_001003712.1	LOC676640	XP_001003712.1	ILMN_2421549	006900328	S	8316	CATTCTGCATTAAGGAGCGCTGATCTGGTCAGTCACTGTGGAAGAGGAAG					PREDICTED: Mus musculus similar to neuron navigator 3, transcript variant 5 (LOC676640), mRNA.					
Mus musculus	RefSeq	ILMN_259145	ILMN_259145	OLFR181	NM_146999.1	NM_146999.1		259001	22128942	NM_146999.1	Olfr181	NP_667210.1	ILMN_2871124	004540300	S	440	GCACATTCATAGCCAGTAACCTGCATTCCTTGATACATACAGGCTGTCTG	16	-	58925906-58925955	16qC1.2	Mus musculus olfactory receptor 181 (Olfr181), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC159100; MOR184-4	MGC159100; MOR184-4
Mus musculus	RefSeq	ILMN_225057	ILMN_225057	2810452K22RIK	NM_026048.2	NM_026048.2		67236	66773178	NM_026048.2	2810452K22Rik	NP_080324.1	ILMN_2992403	003870520	S	1147	GCAGTTGAGAGCACTGTGGACTTCTGGCCTCCCCTGGCAGCAACACACAA	12	-	111321218-111321267	12qF1	Mus musculus RIKEN cDNA 2810452K22 gene (2810452K22Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		Cinp; 1810047K05Rik	Cinp; 1810047K05Rik
Mus musculus	RefSeq	ILMN_208834	ILMN_208834	TRABD	NM_026485.2	NM_026485.2		67976	117606382	NM_026485.2	Trabd	NP_080761.2	ILMN_2643455	004230224	S	264	AAACGACGGCGTGAACGCCCCAACCTTCCACGTACAGTGACCCAGCTAGT	15	+	88912422-88912471	15qE3	Mus musculus TraB domain containing (Trabd), mRNA.				AL023039; 5730502D15Rik	AL023039; 5730502D15Rik
Mus musculus	RefSeq	ILMN_208834	ILMN_208834	TRABD	NM_026485.2	NM_026485.2		67976	117606382	NM_026485.2	Trabd	NP_080761.2	ILMN_2978533	002690240	S	2133	GCACTGAGGGCAGTAGGCACCCACTATGGGCCACGGCTGGTTTGTGTGCA	15	+	88917252-88917301	15qE3	Mus musculus TraB domain containing (Trabd), mRNA.				AL023039; 5730502D15Rik	AL023039; 5730502D15Rik
Mus musculus	RefSeq	ILMN_220454	ILMN_220454	ALDH6A1	NM_134042.2	NM_134042.2		104776	133892341	NM_134042.2	Aldh6a1	NP_598803.1	ILMN_1258158	000510286	S	3229	CCAGCATTTTCCCTTTTTGTCCTTATATGTCTTTGCTGAATTTTGTGAGC	12	-	85771734-85771783	12qD1	Mus musculus aldehyde dehydrogenase family 6, subfamily A1 (Aldh6a1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid [goid 6573] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2-methyl-3-oxopropanoate + CoA + NAD+ = propanoyl-CoA + CO2 + NADH + H+ [goid 4491] [evidence IEA]; Catalysis of the reaction: 3-oxopropanoate + CoA + NADP+ = acetyl-CoA + CO2 + NADPH + H+ [goid 18478] [evidence IEA]	MGC37325; AI314632; 1110038I05Rik	MGC37325; AI314632; 1110038I05Rik
Mus musculus	RefSeq	ILMN_243961	ILMN_243961	VAMP1	NM_001080557.1	NM_001080557.1		22317	123702072	NM_001080557.1	Vamp1	NP_001074026.1	ILMN_3060333	007150554	I	776	GGGGCTGGGGTGCCTGTTACTGAGAGACCTGAATGTCTGGTGATGTGCTG	6	+	125169946-125169995	6qF3	Mus musculus vesicle-associated membrane protein 1 (Vamp1), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		Syb-1; Syb1; VAMP-1	Syb-1; Syb1; VAMP-1
Mus musculus	RefSeq	ILMN_243961	ILMN_243961	VAMP1	NM_001080557.1	NM_001080557.1		22317	123702072	NM_001080557.1	Vamp1	NP_001074026.1	ILMN_3137767	004810048	A	3020	GACTTGATTGTTGTTTGGGCTGTGCTGGGGAGGGGGAGAGGAAGGTGGTG	6	+	125172190-125172239	6qF3	Mus musculus vesicle-associated membrane protein 1 (Vamp1), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		Syb-1; Syb1; VAMP-1	Syb-1; Syb1; VAMP-1
Mus musculus	RefSeq	ILMN_187878	ILMN_243961	VAMP1	NM_001080557.1	NM_001080557.1		22317	123702072	NM_001080557.1	Vamp1	NP_001074026.1	ILMN_2480543	000360088	S	3057	GAGGAAGGTGGTGTCCTATGTTGGCTCTAGGCCAGAAGGGCTGATGTGTG	6	+	125172227-125172276	6qF3	Mus musculus vesicle-associated membrane protein 1 (Vamp1), transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		Syb-1; Syb1; VAMP-1	Syb-1; Syb1; VAMP-1
Mus musculus	Riken	ILMN_205618	ILMN_205618	CCNL	ri|D130043G23|PX00183B18|AK051380|3224					AK051380	Ccnl		ILMN_1227384	005260047	S	3082	CCAAAACATTGCTGTCTATAACTGTGTGTTAGGAGGCGGCTTTGGGAGTA										
Mus musculus	RefSeq	ILMN_217331	ILMN_217331	1300018I05RIK	NM_028791.5	NM_028791.5		74157	146141179	NM_028791.5	1300018I05Rik	NP_083067.1	ILMN_2681984	006590348	S	3665	GCAAGTGCTGGGATGCCATATTTGCACCTAATTCTGGGTCTATCAGTGTG				17qA3.3	Mus musculus RIKEN cDNA 1300018I05 gene (1300018I05Rik), mRNA.				mKIAA0082; AI451264	mKIAA0082; AI451264
Mus musculus	MEEBO	ILMN_221088	ILMN_221088	2810422J05RIK	scl075620.1_116	XM_284425.1			28484789	XM_284425.1	2810422J05Rik		ILMN_1230846	002140592	S	717	GTCGGTCAGCTTGGCTGCTCCATTCTTTCATAGGCAGGATTCCTAATTCC										
Mus musculus	RefSeq	ILMN_213114	ILMN_213114	AIFM2	NM_153779.1	NM_153779.1		71361	24418884	NM_153779.1	Aifm2	NP_722474.1	ILMN_1259418	004490452	S	1249	CGTCTGGATGAATCTGTCTGTGGGGAACGCGGTTGTCCAGAAGGAGGAAA	10	+	61201321-61201370	10qB4	Mus musculus apoptosis-inducing factor, mitochondrion-associated 2 (Aifm2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISO]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISO]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PRG3; Amid; D730001I10Rik; 5430437E11Rik	PRG3; Amid; D730001I10Rik; 5430437E11Rik
Mus musculus	RefSeq	ILMN_222854	ILMN_245582	LONRF3	NM_028894.1	NM_028894.1		74365	71043954	NM_028894.1	Lonrf3	NP_083170.1	ILMN_2755793	004230672	S	2651	CACACAAATAGCAGAAGTGTGAAGAAGTCAAAAAGAGTTGATGTTTAGCA	X	+	33902132-33902181	XqA3.3	Mus musculus LON peptidase N-terminal domain and ring finger 3 (Lonrf3), mRNA.		The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rnf127; 4932412G04Rik; A830039N02Rik; 5730439E01Rik; AU023707	Rnf127; 4932412G04Rik; A830039N02Rik; 5730439E01Rik; AU023707
Mus musculus	RefSeq	ILMN_194981	ILMN_245582	LONRF3	NM_028894.1	NM_028894.1		74365	71043954	NM_028894.1	Lonrf3	NP_083170.1	ILMN_1213378	002760139	S	7252	GGGTTCCCTTCTTCTAAATCTGCACAAAAATAGTTCCAGCTCATCTACGT	X	+	33906733-33906782	XqA3.3	Mus musculus LON peptidase N-terminal domain and ring finger 3 (Lonrf3), mRNA.		The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Rnf127; 4932412G04Rik; A830039N02Rik; 5730439E01Rik; AU023707	Rnf127; 4932412G04Rik; A830039N02Rik; 5730439E01Rik; AU023707
Mus musculus	MEEBO	ILMN_184268	ILMN_184268	AUP1	scl000066.1_125				6671603	NM_007517	Aup1		ILMN_1259485	007040039	S	3	AAGCTGACAGGACGCGCTGACCGGTCTCTTCCCTCCGCAGCGCTTACCGG							The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196049	ILMN_196049	TRAIP	NM_011634.3	NM_011634.3		22036	118130111	NM_011634.3	Traip	NP_035764.2	ILMN_1235176	000870671	S	2031	GGCATGGCATTGGCTCTCTCCCAGGGCACAGGAAGACTAGCAAGAATGGC	9	+	107873933-107873982	9qF1-qF2	Mus musculus TRAF-interacting protein (Traip), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IPI]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 5057] [evidence IPI]		
Mus musculus	RefSeq	ILMN_199874	ILMN_199874	LOC384028	XM_357379.2	XM_357379.2		384028	82893805	XM_357379.2	LOC384028	XP_357379.2	ILMN_1252113	003830324	S	371	AGATCAGTTCTGTGACCAAGACTATGCAGGCGTGTAAGCTGGCCCCGTCC					PREDICTED: Mus musculus similar to enolase 1, alpha (LOC384028), mRNA.					
Mus musculus	RefSeq	ILMN_215984	ILMN_215984	MGP	NM_008597.3	NM_008597.3		17313	123701577	NM_008597.3	Mgp	NP_032623.1	ILMN_2666018	007400725	S	183	CAGGAGAAATGCCAACACCTTTATGTCCCCTCAGCAGAGGTGGCGAGCTA	6	-	136821700-136821749	6qG1	Mus musculus matrix Gla protein (Mgp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	Mglap	Mglap
Mus musculus	RefSeq	ILMN_223540	ILMN_223540	SFRP5	NM_018780.2	NM_018780.2		54612	31560420	NM_018780.2	Sfrp5	NP_061250.2	ILMN_1232779	007100561	S	1096	AGCTGTGCCTTGCCTCGCCTCTGTCCACGCCCACTTGGCCTCACCTTCAC	19	-	42273094-42273143	19qC3	Mus musculus secreted frizzled-related sequence protein 5 (Sfrp5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AI605071; SARP3	AI605071; SARP3
Mus musculus	RefSeq	ILMN_212015	ILMN_212015	FUCA2	NM_025799.4	NM_025799.4		66848	146134981	NM_025799.4	Fuca2	NP_080075.2	ILMN_2621780	002570348	S	3894	ATAAAAATAATAGTGACTCTGATACATGTTTAAAGAAAAATTGATTAAAG				10qA2	Mus musculus fucosidase, alpha-L- 2, plasma (Fuca2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the reaction: an alpha-L-fucoside + H2O = an alcohol + L-fucose [goid 4560] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	5530401P20Rik; 0610025O11Rik	5530401P20Rik; 0610025O11Rik
Mus musculus	RefSeq	ILMN_243191	ILMN_243191	IBSP	NM_008318.1	NM_008318.1		15891	6680334	NM_008318.1	Ibsp	NP_032344.1	ILMN_3141106	006760139	A	1162	GTGCATTTTATAGTGTGGAATGGTGCTACAGCCCCAGAGTGATTTCCGCA	5	+	104739709-104739758	5qE5	Mus musculus integrin binding sialoprotein (Ibsp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BSP	BSP
Mus musculus	RefSeq	ILMN_243191	ILMN_243191	IBSP	NM_008318.1	NM_008318.1		15891	6680334	NM_008318.1	Ibsp	NP_032344.1	ILMN_3063340	003520309	I	1868	CAACCCCTGCCCCCCATGAATGATTTGTCTCTGTGAAACATCTGGAACAA	5	+	104740415-104740464	5qE5	Mus musculus integrin binding sialoprotein (Ibsp), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BSP	BSP
Mus musculus	RefSeq	ILMN_210997	ILMN_210997	PALM	NM_023128.3	NM_023128.3		18483	141801708	NM_023128.3	Palm	NP_075617.2	ILMN_2658144	007100136	S	1939	AGTCAGTGGGTATGTCTGCCAGCGCCACAAAACCTAGCATATCCAGGCAG	10	+	79283073-79283122	10qC1	Mus musculus paralemmin (Palm), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that modulates the surface configuration of a cell [goid 8360] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [evidence IDA]	Interacting selectively with a D3 dopamine receptor [goid 31750] [evidence IPI]	mKIAA0270	mKIAA0270
Mus musculus	RefSeq	ILMN_218041	ILMN_218041	ESAM	NM_027102.2	NM_027102.2		69524	141801984	NM_027102.2	Esam	NP_081378.1	ILMN_2690839	006550681	S	1630	CTCTGTGATCTGTACAACACCCTTATCTAATGCTGTCCTTTGCCGTTCGC	9	+	37345714-37345763	9qA4	Mus musculus endothelial cell-specific adhesion molecule (Esam), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Esam; W117m; 2310008D05Rik	Esam; W117m; 2310008D05Rik
Mus musculus	RefSeq	ILMN_200938	ILMN_200938	LOC384662	XM_357774.1	XM_357774.1			38087177	XM_357774.1	LOC384662		ILMN_1221593	001470129	S	447	CAGAGAGCTGCGGAGAGAATGGGGGTTGAGTCAGAGGAAAGAATGCTGGG										
Mus musculus	RefSeq	ILMN_187108	ILMN_243865	2210009G21RIK	NM_001038641.1	NM_001038641.1		74243	84579819	NM_001038641.1	2210009G21Rik	NP_001033730.1	ILMN_2441242	001170382	S	1904	GTGCCAGGTACTTCTGGCCACATCTTGGGCTGCAGTCCTCTGACTTCTCA	2	+	136894578-136894627	2qF3	Mus musculus RIKEN cDNA 2210009G21 gene (2210009G21Rik), transcript variant 2, mRNA.				RP23-173O12.2; 2410004I22Rik; C85661	RP23-173O12.2; 2410004I22Rik; C85661
Mus musculus	RefSeq	ILMN_210141	ILMN_210141	FLAD1	NM_177041.3	NM_177041.3		319945	89337261	NM_177041.3	Flad1	NP_796015.2	ILMN_2602630	004010598	S	1630	CACCCTGTCTACCGTCCAGCATACCTACTGGAGAATGAGGATGAGGAGAG	3	-	89207103-89207152	3qF1	Mus musculus RFad1, flavin adenine dinucleotide synthetase, homolog (yeast) (Flad1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]	Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + FMN = diphosphate + FAD [goid 3919] [evidence IEA]	A930017E24Rik; Pp591	A930017E24Rik; Pp591
Mus musculus	RefSeq	ILMN_188356	ILMN_243238	MUC15	NM_172979.2	NM_172979.2		269328	141802715	NM_172979.2	Muc15	NP_766567.1	ILMN_2669326	002120176	S	1249	GCTGCACAAACAGGAAATGTGCAGGAAAAGCAGGGTGCATCTGTCATCGA	2	+	110577780-110577829	2qE3	Mus musculus mucin 15 (Muc15), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			4732460E09; D730046L02Rik	4732460E09; D730046L02Rik
Mus musculus	RefSeq	ILMN_215702	ILMN_215702	MPP3	NM_007863.2	NM_007863.2		13384	118026922	NM_007863.2	Mpp3	NP_031889.2	ILMN_2754954	003890154	S	2187	CTCGCAGGCAAGTTGGCCTTGATTCTTTGTACCAAAGCTACGTAGCCACT	11	-	101861577-101861626	11qD	Mus musculus membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) (Mpp3), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6430514B01; Dlgh3	6430514B01; Dlgh3
Mus musculus	RefSeq	ILMN_215702	ILMN_215702	MPP3	NM_007863.2	NM_007863.2		13384	118026922	NM_007863.2	Mpp3	NP_031889.2	ILMN_2698034	003870138	S	1019	GCGACACCAACCTTCGAGCTGGCCTCATCCCATCTAAGCAGTTCCAGGAG	11	-	101874630-101874679	11qD	Mus musculus membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) (Mpp3), mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	6430514B01; Dlgh3	6430514B01; Dlgh3
Mus musculus	RefSeq	ILMN_219899	ILMN_219899	SLC36A2	NM_153170.1	NM_153170.1		246049	23346621	NM_153170.1	Slc36a2	NP_694810.1	ILMN_2946410	004180376	S	2014	GGCAGCATCAAGATGGAGGGGGCCAGGGCCAGTCACAATGCTCAGATAAA	11	-	55002258-55002307	11qB1.3	Mus musculus solute carrier family 36 (proton/amino acid symporter), member 2 (Slc36a2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	The directed movement of L-alanine, the levorotatory isomer of 2-aminopropanoic acid, into, out of, within or between cells [goid 15808] [evidence IDA]; The directed movement of glycine, aminoethanoic acid, into, out of, within or between cells [goid 15816] [evidence IDA]; The directed movement of proline, pyrrolidine-2-carboxylic acid, into, out of, within or between cells [goid 15824] [evidence IDA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IDA]	Catalysis of the transfer of L-tyrosine from one side of a membrane to the other. L-tyrosine is 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 5302] [evidence IDA]; Catalysis of the transfer of L-alanine from one side of a membrane to the other. L-alanine, the levorotatory isomer of 2-aminopropanoic acid [goid 15180] [evidence IDA]; Catalysis of the transfer of glycine from one side of a membrane to the other. Glycine is aminoethanoic acid [goid 15187] [evidence IDA]; Catalysis of the transfer of L-proline from one side of a membrane to the other. L-proline is pyrrolidine-2-carboxylic acid [goid 15193] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + H+(out) = amino acid(in) + H+(in) [goid 5280] [evidence IDA]	PAT2; A530067G19Rik; Tramd1	PAT2; A530067G19Rik; Tramd1
Mus musculus	RefSeq	ILMN_213957	ILMN_213957	EYA2	NM_010165.2	NM_010165.2		14049	118129931	NM_010165.2	Eya2	NP_034295.1	ILMN_1253486	002100750	S	720	CCGTCCTACCCCAGCTTTTCACAGAACCAGTACCCCCAGTATTTCAGCCC	2	+	165541457-165541506	2qH3	Mus musculus eyes absent 2 homolog (Drosophila) (Eya2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AI327163	AI327163
Mus musculus	RefSeq	ILMN_213957	ILMN_213957	EYA2	NM_010165.2	NM_010165.2		14049	118129931	NM_010165.2	Eya2	NP_034295.1	ILMN_1254886	005390095	S	1894	GTCATCTCATACCATGAGGGCCCTAGACACCAGAAACTAGCTAGGGGCCC	2	+	165596661-165596710	2qH3	Mus musculus eyes absent 2 homolog (Drosophila) (Eya2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	AI327163	AI327163
Mus musculus	RefSeq	ILMN_185229	ILMN_224348	BIRC6	NM_007566.2	NM_007566.2		12211	133922595	NM_007566.2	Birc6	NP_031592.2	ILMN_2654828	000510239	S	15315	CTTTAATAAAAGTTAAACAGACATAGCCCCTCTTTTTTGATTTACTGGTA	17	+	75102216-75102265	17qE2	Mus musculus baculoviral IAP repeat-containing 6 (Birc6), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IC ]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IDA]	A430032G04Rik; AA501170; A430040A19Rik; D630005A10Rik; mKIAA1289; Bruce	A430032G04Rik; AA501170; A430040A19Rik; D630005A10Rik; mKIAA1289; Bruce
Mus musculus	RefSeq	ILMN_199888	ILMN_199888	LOC384041	XM_357382.1	XM_357382.1			38078697	XM_357382.1	LOC384041		ILMN_1241628	005310136	S	755	TGGTAGATGGTCTGGATTACTGGCCGCTGACCACAAAGGAATCACTGTCC										
Mus musculus	RefSeq	ILMN_200463	ILMN_200463	LOC381730	XM_355707.1	XM_355707.1			38082262	XM_355707.1	LOC381730		ILMN_1225650	003400465	S	808	GTGGGACTCTAGTATCTCATGCAGTGTCTGTCCTCTGTGGTCACAGAAGC										
Mus musculus	RefSeq	ILMN_216198	ILMN_216198	PDZD3	NM_133226.2	NM_133226.2		170761	153791850	NM_133226.2	Pdzd3	NP_573489.2	ILMN_1258691	004860392	S	1899	GGAGGTGTATCTTCCTTCTACTGTGGATACCTTAGAGTCTTGGGAGCTGG				9qA5.2	Mus musculus PDZ domain containing 3 (Pdzd3), mRNA.	The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NaPi-Cap2; Pdzk2	NaPi-Cap2; Pdzk2
Mus musculus	RefSeq	ILMN_199820	ILMN_199820	LOC383057	XM_139294.2	XM_139294.2			38077627	XM_139294.2	LOC383057		ILMN_1242154	002320364	S	1538	CCGACGATGCAGAGCTAACGCTGGAGCCATCTTTGGTGTCTAATCCCTGC										
Mus musculus	RefSeq	ILMN_205655	ILMN_331253	TNIK	XM_001473602.1	XM_001473602.1		665113	149250825	XM_001473602.1	Tnik	XP_001473652.1	ILMN_1239475	007150300	S	8800	CCAGAGCCAAACAATGAGTCGAAGTGCTTCACAGTTTGTAGTTTCCCAGC	3	+	28571193-28571242	3qA3	PREDICTED: Mus musculus TRAF2 and NCK interacting kinase, transcript variant 1 (Tnik), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_222467	ILMN_222467	PHAX	NM_019996.3	NM_019996.3		56698	142363165	NM_019996.3	Phax	NP_064380.2	ILMN_2749972	000730528	S	1023	AACTTCCAGGAGGACGATGACACATCTCGAGAAACGTTTGCAAGTGACAC	18	+	56746639-56746688	18qD3	Mus musculus phosphorylated adaptor for RNA export (Phax), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of snRNA from the nucleus to the cytoplasm [goid 6408] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	Phax; AU018701; 4933427L19Rik; 2810055C14Rik; D18Ertd65e; AU018854; p55	Phax; AU018701; 4933427L19Rik; 2810055C14Rik; D18Ertd65e; AU018854; p55
Mus musculus	Riken	ILMN_206650	ILMN_206650	A930034J01RIK	ri|A930034J01|PX00316F02|AK080744|1495					AK080744	A930034J01Rik		ILMN_1214157	003420167	S	1096	CACTCAAGGCTAGGGACTGTATGGAAAGGACCAGCGTCCCACAATCCACT										
Mus musculus	RefSeq	ILMN_210268	ILMN_210268	TTC39A	NM_153392.1	NM_153392.1		230603	23510250	NM_153392.1	Ttc39a	NP_700441.1	ILMN_2603888	006330474	S	1820	GGGCTGCACGATGAACAGACAGCTAGCTGGACAGAGCACCTGGAAACATT	4	+	109116824-109116873	4qC7	Mus musculus tetratricopeptide repeat domain 39A (Ttc39a), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC37599	MGC37599
Mus musculus	RefSeq	ILMN_210268	ILMN_210268	TTC39A	NM_153392.1	NM_153392.1		230603	23510250	NM_153392.1	Ttc39a	NP_700441.1	ILMN_2939503	003940397	S	2200	AGGCCACACTGCTTCTCAGACCTCAGCTTTTGAGGACAGGGGTTCCTAGC	4	+	109117204-109117253	4qC7	Mus musculus tetratricopeptide repeat domain 39A (Ttc39a), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC37599	MGC37599
Mus musculus	MEEBO	ILMN_190277	ILMN_190277	C630050I24RIK	scl33372.1.3_130						C630050I24Rik		ILMN_1231262	003610066	S	1	CCTGGCAGGTTGCTTTATGCCGGGTTGCTCAAAACCTATTCCGACTACAA										
Mus musculus	RefSeq	ILMN_214599	ILMN_214599	PRKCI	NM_008857.3	NM_008857.3		18759	133778988	NM_008857.3	Prkci	NP_032883.2	ILMN_2649726	002320524	S	4088	AAGACTTACTATGTGTGTTTTATACAGAATTATTACAGATGATTTTAATT	3	+	30951285-30951334	3qA3	Mus musculus protein kinase C, iota (Prkci), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IMP]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IMP]; The specification and formation of the polarity of a cell along its apical/basal axis [goid 35089] [evidence IMP]	Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA];  [goid 4700] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]	Pkcl; KIAA4165; PKClambda; 2310021H13Rik; Pkci; mKIAA4165; aPKClambda; Prkcl; AI427505	Pkcl; KIAA4165; PKClambda; 2310021H13Rik; Pkci; mKIAA4165; aPKClambda; Prkcl; AI427505
Mus musculus	Riken	ILMN_203469	ILMN_203469	4932441J05RIK	ri|4932441J05|PX00019A21|AK030095|3400					AK030095	4932441J05Rik		ILMN_1254459	004260138	S	3180	TGGTTAGGGAAGGATGGTGGTTCCCCCCAGGGCTACTAAACTCTGTCCCC										
Mus musculus	MEEBO	ILMN_192339	ILMN_192339	DDX55	scl27218.14_118				29789174	NM_026409	Ddx55		ILMN_2487188	000650114	S	20	ATACTTGATTTTAGGCCTGGAAAAGTTTCTAAGCATTTATTCCCAGGCAC								Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]		
Mus musculus	RefSeq	ILMN_191420	ILMN_259451	N28178	NM_172690.2	NM_172690.2		230085	42476176	NM_172690.2	N28178	NP_766278.1	ILMN_1251756	000940669	S	3232	ACAATGAAAATGACTCGGCCATGTTCCCAGGACTGATCAGTAAGATGGCC	4	+	42954318-42954367	4qA5	Mus musculus expressed sequence N28178 (N28178), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	A230025O18; mKIAA1045; RP23-124L1.2	A230025O18; mKIAA1045; RP23-124L1.2
Mus musculus	Riken	ILMN_206753	ILMN_206753	D830005E20RIK	ri|D830005E20|PX00198F05|AK085762|1845					AK085762	D830005E20Rik		ILMN_2582449	006980088	S	1348	AATGGGTCACCTGGGCACTGAGTCAGCAGACACCCCCAAGGTCCCTATAG										
Mus musculus	MEEBO	ILMN_189066	ILMN_189066	5930412G12RIK	scl26003.6.1_21						5930412G12Rik		ILMN_2458053	002760215	S	8	CCGTCTGTGTGTGACTCATATCCAGGAACCCAGGCAGCTTCCCTCAATAG										
Mus musculus	MEEBO	ILMN_210542	ILMN_210542	LRRN2	scl000866.1_7	XM_136224.2			28482199	XM_136224.2	Lrrn2		ILMN_1224922	004760653	S	329	CTGGGTAGCAGCGCGCCGTGGAGCAGCGATCCCAGCCGGGAGGCGAGTGA										
Mus musculus	RefSeq	ILMN_217767	ILMN_314900	A430107D22RIK	NM_178785.3	NM_178785.3		320484	130502227	NM_178785.3	A430107D22Rik	NP_848900.2	ILMN_1232760	000670050	S	3308	AGAGGATTTTCTGACTGCCTCAGCCCTTCATGGCCTTCAGTGGGGGACAG	17	-	32527925-32527974	17qB1	Mus musculus RIKEN cDNA A430107D22 gene (A430107D22Rik), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]		
Mus musculus	RefSeq	ILMN_203981	ILMN_317219	EG432534	XR_035368.1	XR_035368.1		432534	149261656	XR_035368.1	EG432534		ILMN_1243623	000780192	S	2054	CCCACATGGCAGCTCACAACTGACTATAACTCCAGTTCCAGGGGACCTGA	11	+	11366061-11366110	11qA1	PREDICTED: Mus musculus predicted gene, EG432534 (EG432534), misc RNA.					
Mus musculus	RefSeq	ILMN_200870	ILMN_200870	LOC382238	XM_356352.1	XM_356352.1			38086688	XM_356352.1	LOC382238		ILMN_2540292	006040246	S	509	ACGAGCAGTAGCGAGGTTAGTGTGGTGGGCGGGACCGGTTACCTAGCTCT										
Mus musculus	RefSeq	ILMN_225262	ILMN_225262	EPB4.1L4A	NM_013512.2	NM_013512.2		13824	87042271	NM_013512.2	Epb4.1l4a	NP_038540.2	ILMN_2855183	006450382	S	3555	GCCTCCAGCTATTTGAGGGTTCAGTTGGGGGGTAGACTGCTCAGTGATAG	18	-	33956229-33956278	18qB1	Mus musculus erythrocyte protein band 4.1-like 4a (Epb4.1l4a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	NBL4; Epb4.1l4	NBL4; Epb4.1l4
Mus musculus	RefSeq	ILMN_194065	ILMN_225262	EPB4.1L4A	NM_013512.2	NM_013512.2		13824	87042271	NM_013512.2	Epb4.1l4a	NP_038540.2	ILMN_1233779	001450554	S	3524	CTGCCCCGTAATCAAACTTTATCCCACAAATGCCTCCAGCTATTTGAGGG	18	-	33956260-33956309	18qB1	Mus musculus erythrocyte protein band 4.1-like 4a (Epb4.1l4a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	NBL4; Epb4.1l4	NBL4; Epb4.1l4
Mus musculus	RefSeq	ILMN_249101	ILMN_249101	SNAPC3	NM_029949.1	NM_029949.1		77634	31745184	NM_029949.1	Snapc3	NP_084225.1	ILMN_2903698	000380504	S	2277	CCACAGTGAATCCTCAGTCATCCTGCACAGTCATCAAGCAGTCTCCCCTC	4	+	82937284-82937333	4qC3	Mus musculus small nuclear RNA activating complex, polypeptide 3 (Snapc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1810020H02Rik; E030018J20Rik; 5031401C21Rik; AI414457; 4930558A07Rik	1810020H02Rik; E030018J20Rik; 5031401C21Rik; AI414457; 4930558A07Rik
Mus musculus	RefSeq	ILMN_187287	ILMN_249101	SNAPC3	NM_029949.1	NM_029949.1		77634	31745184	NM_029949.1	Snapc3	NP_084225.1	ILMN_2707634	006860082	S	2578	CTCCATGTGCTACTGACACCACGGACACAGTCATACAATGAAACTGCCCA	4	+	82938775-82938824	4qC3	Mus musculus small nuclear RNA activating complex, polypeptide 3 (Snapc3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	1810020H02Rik; E030018J20Rik; 5031401C21Rik; AI414457; 4930558A07Rik	1810020H02Rik; E030018J20Rik; 5031401C21Rik; AI414457; 4930558A07Rik
Mus musculus	RefSeq	ILMN_197919	ILMN_244420	AA474455	XM_993726.1	XM_993726.1		231151	94376188	XM_993726.1	AA474455	XP_998820.1	ILMN_1226462	001110070	S	1162	GAGGCCGCCAGACACAAACGGGAGAGGAGGAAGGAGAACAAAAACCTGGC					PREDICTED: Mus musculus expressed sequence AA474455 (AA474455), mRNA.					
Mus musculus	MEEBO	ILMN_186145	ILMN_186145	D5ERTD708E	scl27258.6_57				21312641	NM_024216	D5Ertd708e		ILMN_1234607	004230551	S	20	TTTTCACAAATCAACATGTATTATTTATACAATTAAAGCTGAAAACTGAA										
Mus musculus	RefSeq	ILMN_212757	ILMN_212757	STK16	NM_011494.3	NM_011494.3		20872	142387156	NM_011494.3	Stk16	NP_035624.2	ILMN_1236046	006510746	S	2701	GAAGGTAAAATTAAAAGGTCACAAGCGGCCAATAGCGGGAGGTAGCAGCC	1	+	75212023-75212072	1qC3	Mus musculus serine/threonine kinase 16 (Stk16), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	EDPK; Krct; PKL12	EDPK; Krct; PKL12
Mus musculus	RefSeq	ILMN_195615	ILMN_212757	STK16	NM_011494.3	NM_011494.3		20872	142387156	NM_011494.3	Stk16	NP_035624.2	ILMN_2517171	007210470	S	2378	GCATACAGCCACCTCACAAACTTGGGGGATGGGCAGGAACAAGGGCAATC	1	+	75211700-75211749	1qC3	Mus musculus serine/threonine kinase 16 (Stk16), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	EDPK; Krct; PKL12	EDPK; Krct; PKL12
Mus musculus	RefSeq	ILMN_241904	ILMN_241904	HEXDC	NM_001001333.1	NM_001001333.1		238023	47679083	NM_001001333.1	Hexdc	NP_001001333.1	ILMN_2911520	006900605	S	1743	CATGTGGAGCCTGTGCTCTTCCTGCTGAGCTCCGGACACCTGTGCAGACA	11	+	121083808-121083857	11qE2	Mus musculus hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing (Hexdc), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	MGC78289; BC069960	MGC78289; BC069960
Mus musculus	RefSeq	ILMN_199241	ILMN_241904	HEXDC	NM_001001333.1	NM_001001333.1		238023	47679083	NM_001001333.1	Hexdc	NP_001001333.1	ILMN_1259158	001090131	S	1680	GAGAGGCTGGGGCCCTGTATATCAGCCTGGACACCACCAAGATTTCTGTT	11	+	121083745-121083794	11qE2	Mus musculus hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing (Hexdc), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	MGC78289; BC069960	MGC78289; BC069960
Mus musculus	MEEBO	ILMN_223001	ILMN_223001	4933425L03RIK	scl43377.58.1_149				51766817	XM_484121	4933425L03Rik		ILMN_1230276	002120072	S	5853	TCCTGGCTGTCCAGGGGACTCACCGGGTCTTCAGAACTTTCAGCATTGCC										
Mus musculus	RefSeq	ILMN_186461	ILMN_186461	TRIM32	NM_053084.1	NM_053084.1		69807	27477052	NM_053084.1	Trim32	NP_444314.1	ILMN_1238237	001050133	S	2659	CATTAAGTGCCACCAAAGGTGACACATAGTCCCTTTGAAAGCAGGACCTC	4	+	65276769-65276818	4qC1	Mus musculus tripartite motif-containing 32 (Trim32), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1810045E12Rik; Zfp117; 3f3	1810045E12Rik; Zfp117; 3f3
Mus musculus	RefSeq	ILMN_186461	ILMN_186461	TRIM32	NM_053084.1	NM_053084.1		69807	27477052	NM_053084.1	Trim32	NP_444314.1	ILMN_2936199	000130433	S	2917	TTCTAGGGCTCAAAGCGTTTTGTACTCCTTCCACTGACCTATGCTAAGAG	4	+	65277027-65277076	4qC1	Mus musculus tripartite motif-containing 32 (Trim32), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	1810045E12Rik; Zfp117; 3f3	1810045E12Rik; Zfp117; 3f3
Mus musculus	RefSeq	ILMN_211280	ILMN_211280	EIF5A2	NM_177586.5	NM_177586.5		208691	118130440	NM_177586.5	Eif5a2	NP_808254.1	ILMN_2614230	004730324	S	4367	GGCCTGGACCTATATTACAGTAACAAGGGAGATTCTTTTATGTATATGAC	3	+	28697143-28697192	3qA3	Mus musculus eukaryotic translation initiation factor 5A2 (Eif5a2), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	MGC124092; 9630038B20; eIF5AII; MGC124093	MGC124092; 9630038B20; eIF5AII; MGC124093
Mus musculus	RefSeq	ILMN_211357	ILMN_211357	MOG	NM_010814.2	NM_010814.2		17441	113199770	NM_010814.2	Mog	NP_034944.2	ILMN_2615034	006400053	S	828	CACTGTTTGTTATTGTGCCTGTTCTTGGACCCCTGGTTGCCTTGATCATC	17	-	37197987-37198036	17qB1	Mus musculus myelin oligodendrocyte glycoprotein (Mog), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			B230317G11Rik	B230317G11Rik
Mus musculus	RefSeq	ILMN_211357	ILMN_211357	MOG	NM_010814.2	NM_010814.2		17441	113199770	NM_010814.2	Mog	NP_034944.2	ILMN_1259536	000620070	S	845	CCTGTTCTTGGACCCCTGGTTGCCTTGATCATCTGCTACAACTGGCTGCA	17	-	37197970-37198019	17qB1	Mus musculus myelin oligodendrocyte glycoprotein (Mog), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			B230317G11Rik	B230317G11Rik
Mus musculus	RefSeq	ILMN_259534	ILMN_259534	CLEC5A	NM_001038604.1	NM_001038604.1		23845	84370375	NM_001038604.1	Clec5a	NP_001033693.1	ILMN_3045984	006290437	I	273	GGCAAAAGTAATGATGGCTTCGTCCCCACGGAGAGCTACGGAACCACTAG	6	-	40534365-40534414	6qB1	Mus musculus C-type lectin domain family 5, member a (Clec5a), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC129447; Ly100; Mdl1; MDL-1; Clecsf5; MGC129446	MGC129447; Ly100; Mdl1; MDL-1; Clecsf5; MGC129446
Mus musculus	RefSeq	ILMN_186646	ILMN_259534	CLEC5A	NM_001038604.1	NM_001038604.1		23845	84370375	NM_001038604.1	Clec5a	NP_001033693.1	ILMN_2608719	005390463	S	806	GTGACTGAAACCAGCCCAGGAAATATAGAGCATCAAAGACTGTGCCCATC	6	-	40527861-40527910	6qB1	Mus musculus C-type lectin domain family 5, member a (Clec5a), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC129447; Ly100; Mdl1; MDL-1; Clecsf5; MGC129446	MGC129447; Ly100; Mdl1; MDL-1; Clecsf5; MGC129446
Mus musculus	RefSeq	ILMN_259534	ILMN_259534	CLEC5A	NM_001038604.1	NM_001038604.1		23845	84370375	NM_001038604.1	Clec5a	NP_001033693.1	ILMN_3121522	002850537	A	3363	GCCATACCCTTGCCAATATGCACTGTTACCTAACTGCCTTGCTTTATGCT	6	-	40525304-40525353	6qB1	Mus musculus C-type lectin domain family 5, member a (Clec5a), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC129447; Ly100; Mdl1; MDL-1; Clecsf5; MGC129446	MGC129447; Ly100; Mdl1; MDL-1; Clecsf5; MGC129446
Mus musculus	RefSeq	ILMN_199260	ILMN_199260	LOC277049	XM_203581.2	XM_203581.2			38093528	XM_203581.2	LOC277049		ILMN_1240399	000940050	S	156	TGATGGTGTAAGGAGGCTGTGCCACATAAGAGGAAAGTTGAGAAAAAGGG										
Mus musculus	RefSeq	ILMN_189820	ILMN_235863	CLEC11A	NM_009131.2	NM_009131.2		20256	142388718	NM_009131.2	Clec11a	NP_033157.1	ILMN_2718204	002690411	S	1071	ACTGTGAGCGGCGCCTCTACTTCGTCTGCGAGTTCCCCTTCTAGAGAACC	7	-	51559906-51559910:51559911-51559955	7qB4	Mus musculus C-type lectin domain family 11, member a (Clec11a), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence NAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Scgf; AW457320; Clecsf3	Scgf; AW457320; Clecsf3
Mus musculus	RefSeq	ILMN_196337	ILMN_196337	AA792892	NM_178894.2	NM_178894.2		100554	31342261	NM_178894.2	AA792892	NP_849225.1	ILMN_2984591	001440674	S	1438	CCTTGTCTCTTGCCTGGGGCTACATGTGTAACACTTTTGTGTGGCTGATC	5	+	246202-246251	5qE3	Mus musculus expressed sequence AA792892 (AA792892), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC159137	MGC159137
Mus musculus	RefSeq	ILMN_196654	ILMN_196654	ARP3B-PENDING	XM_355580.1	XM_355580.1			38079588	XM_355580.1	Arp3b-pending		ILMN_1247625	000240209	S	672	TCCCATAGATGTGCGCCGGCCGCTGTATAAGGCCCTGTGGCTGTTGAGAA										
Mus musculus	RefSeq	ILMN_221969	ILMN_236986	2310002L13RIK	XM_915395.2	XM_915395.2		75577	94404988	XM_915395.2	2310002L13Rik	XP_920488.1	ILMN_2742813	004880524	S	455	CAATACCACCATTGTTATTCACACAGATGGAAGGTCCTGCCAAGATCCCT				18qE2	PREDICTED: Mus musculus RIKEN cDNA 2310002L13 gene (2310002L13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_213419	ILMN_213419	LIME1	NM_023684.2	NM_023684.2		72699	114326526	NM_023684.2	Lime1	NP_076173.1	ILMN_1238893	005890328	S	1529	GGGACAGAGCAAGGCTGCCAAGAATTGCAGCAGAAGGCTAAGGTGATCCC	2	+	181117806-181117855	2qH4	Mus musculus Lck interacting transmembrane adaptor 1 (Lime1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		LIME; 2810038K19Rik	LIME; 2810038K19Rik
Mus musculus	RefSeq	ILMN_210615	ILMN_210615	PCBP4	NM_021567.2	NM_021567.2		59092	31981201	NM_021567.2	Pcbp4	NP_067542.2	ILMN_2607408	004560603	S	1908	AGGGGCCCAGTCTCAGCAGCAGACACTCTGTACAGTTTTTTCAATCCCTG	9	+	106322034-106322083	9qF1	Mus musculus poly(rC) binding protein 4 (Pcbp4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	AlphaCP-4; 1200003L19Rik	AlphaCP-4; 1200003L19Rik
Mus musculus	RefSeq	ILMN_221422	ILMN_221422	DEFB20	NM_176950.3	NM_176950.3		319579	124301231	NM_176950.3	Defb20	NP_795924.2	ILMN_1239050	001580709	S	358	CACTTGTTCACGAAGGCCGTTGTCCCCTGCAGCCCCATGGAATCCAGTGG	2	+	152305338-152305387	2qH1	Mus musculus defensin beta 20 (Defb20), mRNA.				RP23-453K8.4; Defb20	RP23-453K8.4; Defb20
Mus musculus	MEEBO	ILMN_217768	ILMN_217768	PAX5	scl24379.10.1_7	NM_008782.1			6679212	NM_008782.1	Pax5		ILMN_2687307	001300338	S	1069	CAGCCACCCTCAGTATTCTTCCTACAATGATTCTTGGAGGTTCCCCAACC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3 [goid 51573] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	Riken	ILMN_203763	ILMN_203763	A130038M19RIK	ri|A130038M19|PX00122N02|AK037700|3277					AK037700	A130038M19Rik		ILMN_1213135	001940242	S	3074	ACCTATGCCAAGAGGGGAATGAGAAACATGAGGATCACTGGAAGCTCAGG										
Mus musculus	Riken	ILMN_205949	ILMN_205949	C230004H03RIK	ri|C230004H03|PX00173A03|AK048685|3400					AK048685	C230004H03Rik		ILMN_1236453	005860754	S	3091	TGGTTTTGCAGAGGGCCCAAGTTCAGTTCCCACTACCTGAGTGAGATGGC										
Mus musculus	RefSeq	ILMN_214107	ILMN_214107	DUSP11	NM_028099.2	NM_028099.2		72102	46519172	NM_028099.2	Dusp11	NP_082375.2	ILMN_2711705	000630343	S	1120	CGTCAGGGCCACCTGAGACCAGAGCTGGACAGAAGACAGCTGAATGAATT	6	-	85897527-85897576	6qC3	Mus musculus dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) (Dusp11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	AI481497; 2010300F21Rik	AI481497; 2010300F21Rik
Mus musculus	RefSeq	ILMN_214107	ILMN_214107	DUSP11	NM_028099.2	NM_028099.2		72102	46519172	NM_028099.2	Dusp11	NP_082375.2	ILMN_1259683	000160348	S	6193	GGATCGACAGGTCTCGCTTCCCTCTGTTGCTGAGTTGCTCTTGTATATGG	6	-	85892454-85892503	6qC3	Mus musculus dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) (Dusp11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	AI481497; 2010300F21Rik	AI481497; 2010300F21Rik
Mus musculus	RefSeq	ILMN_230936	ILMN_230936	PSG27	NM_001037168.1	NM_001037168.1		545925	81230477	NM_001037168.1	Psg27	NP_001032245.1	ILMN_2864569	004010400	S	1791	CCTCCATATGCTCCCCCCTTCTTATGGGATTTATGTATACACCCTTGGCT	7	-	19141964-19142013	7qA3	Mus musculus pregnancy-specific glycoprotein 27 (Psg27), mRNA.		The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]		MGC117716	MGC117716
Mus musculus	RefSeq	ILMN_194727	ILMN_194727	ZFP629	NM_177226.5	NM_177226.5		320683	118130365	NM_177226.5	Zfp629	NP_796200.1	ILMN_2509052	007000397	S	5792	CAAAGGAGTGCAAACACAGGGGGGTGGAGCTGATCTGCACTTAAGGTGAG	7	-	134750823-134750872	7qF3	Mus musculus zinc finger protein 629 (Zfp629), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	9330199A09Rik	9330199A09Rik
Mus musculus	RefSeq	ILMN_220644	ILMN_220644	KCNAB2	NM_010598.2	NM_010598.2		16498	31543029	NM_010598.2	Kcnab2	NP_034728.2	ILMN_2724785	007400575	S	3453	GCTTCCCGACAGACTCAGACCAAGGTGCGGCCCCGTATTTATGGAATGGC	4	-	151764880-151764929	4qE2	Mus musculus potassium voltage-gated channel, shaker-related subfamily, beta member 2 (Kcnab2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	I2rf5; F5; Kcnb3	I2rf5; F5; Kcnb3
Mus musculus	RefSeq	ILMN_201503	ILMN_201503	LOC382193	XM_356300.1	XM_356300.1			38095239	XM_356300.1	LOC382193		ILMN_1221776	001090114	S	97	CCCAAGGCTTCAGAGTCATTGGATTGCAGTGATGTCAGGATTATGCTTTG										
Mus musculus	Riken	ILMN_207338	ILMN_207338	GPC3	ri|6030455O07|PX00646M02|AK077942|1882					AK077942	Gpc3		ILMN_1223663	002600647	S	1764	TGCTGACTGCTCTCAGTTATTGGGAGTGAACTTTGCATTACACACCATGC						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IGI]; Branching of the ureteric bud [goid 1658] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity [goid 30513] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [evidence IMP]			
Mus musculus	RefSeq	ILMN_223924	ILMN_244359	ALDH1A7	NM_011921.2	NM_011921.2		26358	118130002	NM_011921.2	Aldh1a7	NP_036051.1	ILMN_1218981	003130288	S	1712	GGCAGAATCAGAGTCTTCTAATCCGTGAACCCAATTCATATCCCAGAACA	19	-	20767741-20767790	19qB	Mus musculus aldehyde dehydrogenase family 1, subfamily A7 (Aldh1a7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A [goid 42574] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]	Aldh1a4; Aldhpb; AI987940; Aldh-pb; Ahd2-like	Aldh1a4; Aldhpb; AI987940; Aldh-pb; Ahd2-like
Mus musculus	RefSeq	ILMN_195814	ILMN_256595	C030046I01RIK	NM_177994.4	NM_177994.4		109284	109627659	NM_177994.4	C030046I01Rik	NP_818775.2	ILMN_1224551	004070524	S	874	CTCTGTCTGCTAATAAGATCTTCCACGCTTTCAGAATTTGAATGCCACCC	10	-	79373695-79373744	10qC1	Mus musculus RIKEN cDNA C030046I01 gene (C030046I01Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI503502	AI503502
Mus musculus	RefSeq	ILMN_195814	ILMN_256595	C030046I01RIK	NM_177994.4	NM_177994.4		109284	109627659	NM_177994.4	C030046I01Rik	NP_818775.2	ILMN_1244149	000840307	S	1596	CTCCTCCTTCTCCCCTCTCCTTATGCCAGGGGTCCAGGACTTCCAGCCAG	10	-	79372973-79373022	10qC1	Mus musculus RIKEN cDNA C030046I01 gene (C030046I01Rik), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI503502	AI503502
Mus musculus	Riken	ILMN_206585	ILMN_206585	D930010K02RIK	ri|D930010K02|PX00200K02|AK086178|1722					AK086178	D930010K02Rik		ILMN_1216582	005130500	S	1186	ATGATGTGAGCCCAGGATCCCTAACTGGCAAGGAGGTACAGAAGGGATTC										
Mus musculus	RefSeq	ILMN_186749	ILMN_238304	IPO7	NM_181517.3	NM_181517.3		233726	118130675	NM_181517.3	Ipo7	NP_852658.2	ILMN_2619968	004830379	S	2964	AAGGAAACAGTTACAGGACATAGCAACTCTAGCTGATCAAAGAAGAGCAG	7	+	117190302-117190351	7qF1	Mus musculus importin 7 (Ipo7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IDA]	A330055O14Rik; Ranbp7; Imp7; C330016G14	A330055O14Rik; Ranbp7; Imp7; C330016G14
Mus musculus	RefSeq	ILMN_215830	ILMN_215830	ASPSCR1	NM_026877.1	NM_026877.1		68938	30794437	NM_026877.1	Aspscr1	NP_081153.1	ILMN_2664088	001990161	S	76	GGTGTCGGTGCTGGCCCCAAACGGGCGGCGCCACACGGTGAAGGTGACGC	11	+	120534428-120534477	11qE2	Mus musculus alveolar soft part sarcoma chromosome region, candidate 1 (human) (Aspscr1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IDA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; Any process that modulates the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46324] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	ASPS; ASPC; ASPCR1; TUG; 1190006K01Rik; ASPL; RCC17	ASPS; ASPC; ASPCR1; TUG; 1190006K01Rik; ASPL; RCC17
Mus musculus	MEEBO	ILMN_191001	ILMN_191001	2010320M18RIK	scl33715.1.37_118						2010320M18Rik		ILMN_2475211	002480041	S	20	GAAATACGGACAGACTCTGGCGAGACGGAGAGAACCAGAAGTTGCCGAGC										
Mus musculus	Riken	ILMN_201769	ILMN_201769	MVK	ri|2310010A05|ZX00052I05|AK009261|1032					AK009261	Mvk		ILMN_1244594	001230561	S	815	GGCGTCATTGCCACAGCTAACACAGTTACCCCCACATATCCAGGAAGAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + (R)-mevalonate = ADP + (R)-5-phosphomevalonate [goid 4496] [evidence IDA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]		
Mus musculus	RefSeq	ILMN_213372	ILMN_213372	OLFR1467	NM_146691.1	NM_146691.1		258686	33239137	NM_146691.1	Olfr1467	NP_666902.1	ILMN_2636395	001230189	S	860	TGGTCTACAGCTTGAGGAATAAGGAAGTGAAGAGTGCACTCAAAAAGATC	19	+	13439979-13440028	19qA	Mus musculus olfactory receptor 1467 (Olfr1467), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR202-15	MOR202-15
Mus musculus	RefSeq	ILMN_213741	ILMN_213741	DUSP6	NM_026268.2	NM_026268.2		67603	141803119	NM_026268.2	Dusp6	NP_080544.1	ILMN_2701321	006940255	S	1005	TCTGACCTTGACCGAGACCCCAATAGTGCAACGGACTCTGATGGCAGCCC	10	+	98727321-98727370	10qD1	Mus musculus dual specificity phosphatase 6 (Dusp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	MGC98540; MKP3; PYST1; MKP-3; 1300019I03Rik	MGC98540; MKP3; PYST1; MKP-3; 1300019I03Rik
Mus musculus	RefSeq	ILMN_213741	ILMN_213741	DUSP6	NM_026268.2	NM_026268.2		67603	141803119	NM_026268.2	Dusp6	NP_080544.1	ILMN_1248537	006330768	S	2417	GCCTTACCTTTGTAAATATTTGGCTTACAGTGTCTCAAGGGGTATTTTGG	10	+	98729743-98729792	10qD1	Mus musculus dual specificity phosphatase 6 (Dusp6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IDA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	MGC98540; MKP3; PYST1; MKP-3; 1300019I03Rik	MGC98540; MKP3; PYST1; MKP-3; 1300019I03Rik
Mus musculus	RefSeq	ILMN_207512	ILMN_207512	SPNA2	XM_207079.2	XM_207079.2			38074606	XM_207079.2	Spna2		ILMN_2618634	007000056	S	5681	ACAATCACCAATGTTGTGGGACCCAGACCCATGTTTGAGCCAGCTGCCCT						Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]		
Mus musculus	MEEBO	ILMN_184593	ILMN_184593	0610041E09RIK	scl44547.9.1_2				13384701	NM_025335	0610041E09Rik		ILMN_2437143	001090500	S	8	GTGAGGGCCTGTAGATATCAATTCCTATCAAACCTAGAAATACAACTCAT										
Mus musculus	RefSeq	ILMN_209100	ILMN_209100	HFE	NM_010424.4	NM_010424.4		15216	145966687	NM_010424.4	Hfe	NP_034554.2	ILMN_2592519	001580717	S	938	ACATTGGCCGTGGCCCCTGGGGACGAGACAAGGTTCACCTGTCAAGTGGA				13qA3.1	Mus musculus hemochromatosis (Hfe), mRNA.	A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IMP]; The regulation of the levels, transport, and metabolism of iron ions [goid 55072] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]		MGC151121; MR2; MGC151123	MGC151121; MR2; MGC151123
Mus musculus	RefSeq	ILMN_216015	ILMN_216015	TDG	NM_172552.2	NM_172552.2		21665	142388766	NM_172552.2	Tdg	NP_766140.1	ILMN_2750493	004260523	S	3235	CATGAGGATCTTTGTGAGTTTGAAGTTGTGAGTTCCCATTTATCCAGGGA	10	+	82113329-82113378	10qC1	Mus musculus thymine DNA glycosylase (Tdg), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with the small ubiquitin-like protein SUMO [goid 32183] [evidence IPI]	JZA-3; Jza1; E130317C12Rik	JZA-3; Jza1; E130317C12Rik
Mus musculus	RefSeq	ILMN_246368	ILMN_246368	RBPMS	NM_001042675.1	NM_001042675.1		19663	111185958	NM_001042675.1	Rbpms	NP_001036140.1	ILMN_3099398	002360717	A	716	CACTTTACCCCAGTAGCCCTGAAGTTTGGGCCCCGTACCCTCTGTACCCA	8	-	34917254-34917303	8qA4	Mus musculus RNA binding protein gene with multiple splicing (Rbpms), transcript variant 3, mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2010300K22Rik; 2700019M19Rik; hermes; AU017537	2010300K22Rik; 2700019M19Rik; hermes; AU017537
Mus musculus	RefSeq	ILMN_246368	ILMN_246368	RBPMS	NM_001042675.1	NM_001042675.1		19663	111185958	NM_001042675.1	Rbpms	NP_001036140.1	ILMN_3026557	004050121	I	839	CTCCAGAGGCAAAGCCCAACACACCTGTCTTTTGTCCACTTCTTCAGCAG	8	-	34914597-34914646	8qA4	Mus musculus RNA binding protein gene with multiple splicing (Rbpms), transcript variant 3, mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	2010300K22Rik; 2700019M19Rik; hermes; AU017537	2010300K22Rik; 2700019M19Rik; hermes; AU017537
Mus musculus	Riken	ILMN_203266	ILMN_203266	9330185F14RIK	ri|9330185F14|PX00107G02|AK034383|1541					AK034383	9330185F14Rik		ILMN_1253898	000940253	S	1365	CTGTGTGGTGGGGTGGTTAGAAGAACAGCCTCCCCGGTCAGAGAGCAACT										
Mus musculus	RefSeq	ILMN_203688	ILMN_241571	ZDHHC9	XM_984119.1	XM_984119.1		208884	94408715	XM_984119.1	Zdhhc9	XP_989213.1	ILMN_1235069	007320170	S	3418	GTATCTGACACCCTTTTCCAGCCTCTGTGGGTACTAGGCATGCATCGGTG				XqA4	PREDICTED: Mus musculus zinc finger, DHHC domain containing 9 (Zdhhc9), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221210	ILMN_311413	LOC100044291	XM_001471894.1	XM_001471894.1		100044291	149258608	XM_001471894.1	LOC100044291	XP_001471944.1	ILMN_2732519	001300397	S	247	ACGTCGCTGCAATAGAGGAGAACTATTTTATGGGACCTGCGCAGGACCTT					PREDICTED: Mus musculus hypothetical protein LOC100044291 (LOC100044291), mRNA.					
Mus musculus	RefSeq	ILMN_211972	ILMN_211972	SETDB1	NM_018877.2	NM_018877.2		84505	51092286	NM_018877.2	Setdb1	NP_061365.2	ILMN_2621319	004200746	S	3849	GCCCCAACCTGTTTGTCCAGAATGTGTTTGTGGATACCCATGATCTTCGC	3	-	95128255-95128304	3qF2.1	Mus musculus SET domain, bifurcated 1 (Setdb1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AU022152; mKIAA0067; MGC90670; ESET	AU022152; mKIAA0067; MGC90670; ESET
Mus musculus	Riken	ILMN_203995	ILMN_203995	A630049E09RIK	ri|A630049E09|PX00145F17|AK041965|1503					AK041965	A630049E09Rik		ILMN_1225469	002650168	S	1118	GCCCCCCCACACACACACAAACAGCAAACACATTGCACATGGACATGCCC										
Mus musculus	RefSeq	ILMN_195718	ILMN_234031	NKAIN3	NM_172987.2	NM_172987.2		269513	50054089	NM_172987.2	Nkain3	NP_766575.2	ILMN_1259590	006550372	S	1893	CTGGTGTGTTGCATGACTCTAACATCCATGAAGACGAAGCCTGGATGAGC	4	-	20171946-20171995	4qA3	Mus musculus Na+/K+ transporting ATPase interacting 3 (Nkain3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			RP23-390D11.1; C530048M05	RP23-390D11.1; C530048M05
Mus musculus	RefSeq	ILMN_214649	ILMN_214649	HMG20A	NM_025812.2	NM_025812.2		66867	31981181	NM_025812.2	Hmg20a	NP_080088.1	ILMN_2650327	000290112	S	3011	CATTCGCATAGCCAGAATTCAGTAGGATAGCAAGGGAATCTCCACGATGG	9	+	56344213-56344262	9qB	Mus musculus high mobility group 20A (Hmg20a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Ibraf; 1200004E06Rik; 5730490E10Rik	Ibraf; 1200004E06Rik; 5730490E10Rik
Mus musculus	RefSeq	ILMN_214649	ILMN_214649	HMG20A	NM_025812.2	NM_025812.2		66867	31981181	NM_025812.2	Hmg20a	NP_080088.1	ILMN_2968479	005390082	S	3112	CAGCTGCCATAAGTGGCTGGGCTTCAGTCAGGTTGTATAGAGCTGGTCTG	9	+	56344314-56344363	9qB	Mus musculus high mobility group 20A (Hmg20a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Ibraf; 1200004E06Rik; 5730490E10Rik	Ibraf; 1200004E06Rik; 5730490E10Rik
Mus musculus	RefSeq	ILMN_197694	ILMN_311657	LOC633371	XR_031743.1	XR_031743.1		633371	149251524	XR_031743.1	LOC633371		ILMN_1214525	004230324	S	12909	GATCACAGCAGTAGCGCAGCCAGGGATTAAGGCAGTTCCCCCACGAATGC					PREDICTED: Mus musculus similar to cadherin protein (LOC633371), misc RNA.					
Mus musculus	MEEBO	ILMN_215161	ILMN_215161	6530401P13	scl16089.3.198_18	NM_177644.2			31342234	NM_177644.2	6530401P13		ILMN_1224413	001240215	S	2290	GGACCTTCTTAAAGAGCCTGTCTGTATTACAAGATTGAATGCCCAAAGCA										
Mus musculus	RefSeq	ILMN_209610	ILMN_209610	MIDN	NM_021565.1	NM_021565.1		59090	10947007	NM_021565.1	Midn	NP_067540.1	ILMN_2658566	000020154	S	3587	GGAAGAATCCGGCTGTGGGGTATCCACCTCGCCCAAGTCTCCTTTTACTG	10	+	79620991-79621040	10qC1	Mus musculus midnolin (Midn), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		3000003C15Rik	3000003C15Rik
Mus musculus	RefSeq	ILMN_209610	ILMN_209610	MIDN	NM_021565.1	NM_021565.1		59090	10947007	NM_021565.1	Midn	NP_067540.1	ILMN_2597445	001170477	S	880	GGAGGCTTCCGGAAATACAGATTGATTTTATTTAAGCGTCCGTGGCACCG	10	+	79616372-79616421	10qC1	Mus musculus midnolin (Midn), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		3000003C15Rik	3000003C15Rik
Mus musculus	RefSeq	ILMN_209610	ILMN_209610	MIDN	NM_021565.1	NM_021565.1		59090	10947007	NM_021565.1	Midn	NP_067540.1	ILMN_1228026	002570592	S	3592	GAATCCGGCTGTGGGGTATCCACCTCGCCCAAGTCTCCTTTTACTGAAAT	10	+	79620996-79621045	10qC1	Mus musculus midnolin (Midn), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		3000003C15Rik	3000003C15Rik
Mus musculus	Riken	ILMN_201783	ILMN_201783	2210414H16RIK	ri|2210414H16|ZX00054G04|AK008925|1003					AK008925	2210414H16Rik		ILMN_1241919	004890605	S	738	GCCAACGCAACTGACTGCTGAGCTTTGGGGAAAGTACCATGACAGTGAGG										
Mus musculus	RefSeq	ILMN_221045	ILMN_215292	CREB1	NM_133828.2	NM_133828.2		12912	82546873	NM_133828.2	Creb1	NP_598589.2	ILMN_2730325	004120639	S	5622	AACAAGGACCAGATAACATTTGAATGGAGGAATTATATTTCAGGTGTTTT	1	+	64648365-64648414	1qC2	Mus musculus cAMP responsive element binding protein 1 (Creb1), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb
Mus musculus	RefSeq	ILMN_215292	ILMN_215292	CREB1	NM_133828.2	NM_133828.2		12912	82546873	NM_133828.2	Creb1	NP_598589.2	ILMN_1243123	000130707	S	1979	TTAAAATCATACTATAAAGCTTATTCTGGTGAGTACTAAGTCTTAATGAG	1	+	64644722-64644771	1qC2	Mus musculus cAMP responsive element binding protein 1 (Creb1), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb
Mus musculus	RefSeq	ILMN_215292	ILMN_215292	CREB1	NM_133828.2	NM_133828.2		12912	82546873	NM_133828.2	Creb1	NP_598589.2	ILMN_1224156	001740725	S	1910	CAGCAGTTTGAATACATTAACAGAAGTAACCAACTGAATGGAAAGCATGG	1	+	64644653-64644702	1qC2	Mus musculus cAMP responsive element binding protein 1 (Creb1), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb
Mus musculus	RefSeq	ILMN_215292	ILMN_215292	CREB1	NM_133828.2	NM_133828.2		12912	82546873	NM_133828.2	Creb1	NP_598589.2	ILMN_2657709	000290008	S	244	GCAGACAACCAGCAGAGTGGAGATGCTGCTGTAACAGAAGCTGAAAATCA	1	+	64597449-64597498	1qC2	Mus musculus cAMP responsive element binding protein 1 (Creb1), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb
Mus musculus	RefSeq	ILMN_215292	ILMN_215292	CREB1	NM_133828.2	NM_133828.2		12912	82546873	NM_133828.2	Creb1	NP_598589.2	ILMN_1215890	003130543	S	1010	CACAGCCTGCTGAAGAAGCAGCACGGAAGAGAGAGGTCCGTCTAATGAAG	1	+	64622849-64622898	1qC2	Mus musculus cAMP responsive element binding protein 1 (Creb1), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISO]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IMP]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IMP]; The secretion of milk by the mammary gland [goid 7595] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [evidence ISO]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISO]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IDA]; Any process that modulates the size of a cell [goid 8361] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISO]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb	Creb-1; AV083133; 2310001E10Rik; 3526402H21Rik; Creb
Mus musculus	RefSeq	ILMN_217927	ILMN_258508	MYBPHL	NM_026831.1	NM_026831.1		68753	74316016	NM_026831.1	Mybphl	NP_081107.1	ILMN_2689426	006620196	S	1201	CCTGACTCTGACAAGACTGTGTCCTCAAGGAGCATTAGCTGGCTTGGCCT	3	+	108182900-108182949	3qF3	Mus musculus myosin binding protein H-like (Mybphl), mRNA.				RP23-27B23.6; MGC107699; 1110037P11Rik	RP23-27B23.6; MGC107699; 1110037P11Rik
Mus musculus	MEEBO	ILMN_217821	ILMN_217821	BC008150	scl46688.11_26				51831084	XM_484507	BC008150		ILMN_2687974	007210711	S	2450	GCTGCTTGTGCCAGTTGACGTTTCTGCTCCAGTGTTTGATTCTAGTGTCT										
Mus musculus	RefSeq	ILMN_215441	ILMN_215441	TTC29	NM_183096.2	NM_183096.2		73301	34328520	NM_183096.2	Ttc29	NP_898919.2	ILMN_2976991	003390577	S	2150	TCTCAGGGAAACCTCAGCAGACACAAAGGGCCATGAGCAGTCTGTGCTTG	8	+	80917925-80917974	8qC1	Mus musculus tetratricopeptide repeat domain 29 (Ttc29), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1700031F13Rik	1700031F13Rik
Mus musculus	RefSeq	ILMN_215441	ILMN_215441	TTC29	NM_183096.2	NM_183096.2		73301	34328520	NM_183096.2	Ttc29	NP_898919.2	ILMN_2976989	001570767	S	2357	CCGCAGCTTCCCTCTGAAACCTCTGGAACTCCTCCCGTGAATCCATAAGG	8	+	80918132-80918181	8qC1	Mus musculus tetratricopeptide repeat domain 29 (Ttc29), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	1700031F13Rik	1700031F13Rik
Mus musculus	Riken	ILMN_202985	ILMN_202985	6230412O07RIK	ri|6230412O07|PX00042A03|AK031765|2853					AK031765	6230412O07Rik		ILMN_2553837	004060762	S	2436	GGCAAGCAGATATTCACAGTTGCGCAGGCCACTCGTCAGGTACACCACTG										
Mus musculus	RefSeq	ILMN_216322	ILMN_216322	BC065085	NM_177628.3	NM_177628.3		219148	41055045	NM_177628.3	BC065085	NP_808296.2	ILMN_2974737	004040139	S	3784	CCACTGTGCTGCCACAAGGTCATGTCCAATGCCTCCATGGCCTCAGTAGC	14	+	64084105-64084154	14qD1	Mus musculus cDNA sequence BC065085 (BC065085), mRNA.				A030013D21	A030013D21
Mus musculus	RefSeq	ILMN_213088	ILMN_213088	PNOC	NM_010932.1	NM_010932.1		18155	33468910	NM_010932.1	Pnoc	NP_035062.1	ILMN_1255322	000650369	S	1513	GAGGACATCCAGCTACTATTAGAGGCCACTCGAAGCTCCAGACCCAGCAG	14	-	66019841-66019890	14qD1	Mus musculus prepronociceptin (Pnoc), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]	Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect [goid 1515] [evidence IEA]	OFQ/N; N23K; N/OFQ; Npnc1	OFQ/N; N23K; N/OFQ; Npnc1
Mus musculus	RefSeq	ILMN_209909	ILMN_209909	OLFR474	NM_146495.1	NM_146495.1		258488	33239113	NM_146495.1	Olfr474	NP_666706.1	ILMN_1245462	001170288	S	643	GCTGTCTTCTACATCTGCATACTTATGACCATCCTTAAGATGCACTCCAC	7	+	115098799-115098848	7qE3	Mus musculus olfactory receptor 474 (Olfr474), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR204-20	MOR204-20
Mus musculus	RefSeq	ILMN_201490	ILMN_201490	LOC385251	XM_358148.1	XM_358148.1			38094517	XM_358148.1	LOC385251		ILMN_1247368	006520427	S	152	AGGCCTGCTATGTCGGAATCGTCACTTCAGCCTCTGCTGAGCATTTGGGT										
Mus musculus	RefSeq	ILMN_259993	ILMN_259993	5133400G04RIK	NM_029485.1	NM_029485.1		71242	56961613	NM_029485.1	5133400G04Rik	NP_083761.1	ILMN_3030392	001850544	I	546	ATGGCCCAGGTGCTGGATCAGAAGCGTAAGAAAGCCACAGGAATGCGTCG	18	-	35816402-35816451	18qB2	Mus musculus RIKEN cDNA 5133400G04 gene (5133400G04Rik), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		4930583E11Rik; 2700012K08Rik; AU016220	4930583E11Rik; 2700012K08Rik; AU016220
Mus musculus	RefSeq	ILMN_185538	ILMN_259993	5133400G04RIK	NM_029485.1	NM_029485.1		71242	56961613	NM_029485.1	5133400G04Rik	NP_083761.1	ILMN_2427869	002900441	S	584	AGGAATGCGTCGGGCCCGTAGCCGTCAGTGTTCCAGGGAGAAATAAACTG	18	-	35816364-35816368:35816369-35816413	18qB2	Mus musculus RIKEN cDNA 5133400G04 gene (5133400G04Rik), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		4930583E11Rik; 2700012K08Rik; AU016220	4930583E11Rik; 2700012K08Rik; AU016220
Mus musculus	RefSeq	ILMN_259993	ILMN_259993	5133400G04RIK	NM_029485.1	NM_029485.1		71242	56961613	NM_029485.1	5133400G04Rik	NP_083761.1	ILMN_3103689	001510592	A	248	GAAGTTACAGTTTGCTCTGGGAGAGGTGGAGGTGCTGTCCAAGCAGCTGG	18	-	35820125-35820174	18qB2	Mus musculus RIKEN cDNA 5133400G04 gene (5133400G04Rik), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		4930583E11Rik; 2700012K08Rik; AU016220	4930583E11Rik; 2700012K08Rik; AU016220
Mus musculus	RefSeq	ILMN_209449	ILMN_209449	CHST10	NM_145142.2	NM_145142.2		98388	70908367	NM_145142.2	Chst10	NP_660124.2	ILMN_2595863	005720471	S	2898	GAGGCTCAGCCCTTCCTTGTGAACTGATAAACTGTAAACGTGATGTTGGG	1	-	38920889-38920938	1qB	Mus musculus carbohydrate sulfotransferase 10 (Chst10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IMP]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IMP]	ST; Hnk-1st; AU041319; AI507003	ST; Hnk-1st; AU041319; AI507003
Mus musculus	RefSeq	ILMN_255292	ILMN_255292	EG432649	NM_001014396.1	NM_001014396.1		432649	85701475	NM_001014396.1	EG432649	NP_001014418.1	ILMN_2819873	004920372	S	840	GGCGAACATTATACAGCAAGAACGTGTGTCTGGGTCTCGAGAGAGGTGTC	12	+	36601488-36601537	12qA3	Mus musculus predicted gene, EG432649 (EG432649), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Mus musculus	MEEBO	ILMN_192695	ILMN_192695	CSPG2	scl071433.1_94				51767793	XM_488510	Cspg2		ILMN_1243423	002000598	S	3	GCAATGGGCGGGCTACGGTCCCTTCTTGACACAAGGATGGATTACAGAAC										
Mus musculus	Riken	ILMN_201798	ILMN_201798	CCNC	ri|2310034I23|ZX00059G02|AK009615|1407					AK009615	Ccnc		ILMN_1247482	006100554	S	954	GGCAGGGCCTGAAGCTGCAAGATGATGCTGGACAAGATAAGGCAATCTCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]			
Mus musculus	RefSeq	ILMN_201348	ILMN_261784	EG626571	XM_901734.2	XM_901734.2		626571	94389922	XM_901734.2	EG626571	XP_906827.1	ILMN_2541978	005310687	S	274	ACTGGTTGCATAAGATACCTTACCCCGCGGGGCCGCTTCGTGCATATCCC	11	-	28239503-28239552	11qA3.3	PREDICTED: Mus musculus predicted gene, EG626571, transcript variant 2 (EG626571), mRNA.					
Mus musculus	RefSeq	ILMN_199141	ILMN_261784	EG626571	XM_901734.2	XM_901734.2		626571	94389922	XM_901734.2	EG626571	XP_906827.1	ILMN_1230391	006180438	S	13	ATGCCGCGCCGGGGCCTAGTAGCCGGGCCAGACTTGGATAATTTTCAACG	11	-	28239764-28239813	11qA3.3	PREDICTED: Mus musculus predicted gene, EG626571, transcript variant 2 (EG626571), mRNA.					
Mus musculus	RefSeq	ILMN_254539	ILMN_254539	RHOX12	NM_001025083.2	NM_001025083.2		382282	91206459	NM_001025083.2	Rhox12	NP_001020254.1	ILMN_3067699	000730113	I	303	GGGGGAGAATGAGATCGAAGTGACCCTTGATGCTGATCAAGAGGCTGATG	X	-	35461226-35461275	XqA3.3	Mus musculus reproductive homeobox 12 (Rhox12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm1148	Gm1148
Mus musculus	RefSeq	ILMN_254539	ILMN_254539	RHOX12	NM_001025083.2	NM_001025083.2		382282	91206459	NM_001025083.2	Rhox12	NP_001020254.1	ILMN_3145787	004780241	A	562	AGAGTTCCACAGGTCCGGCGCACAAGGCCACGGATCCAGTTGGGTTTCAC	X	-	35460967-35461016	XqA3.3	Mus musculus reproductive homeobox 12 (Rhox12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Gm1148	Gm1148
Mus musculus	RefSeq	ILMN_196377	ILMN_196377	2810488O17RIK	XM_149013.1	XM_149013.1			20848332	XM_149013.1	2810488O17Rik		ILMN_1235079	005050594	S	330	CTCAGGCATTCAGTGAGAGGAGGGGTCTATTGTTCCTGGGATGGAAATGC										
Mus musculus	RefSeq	ILMN_212610	ILMN_321302	LOC100045304	XM_001474024.1	XM_001474024.1		100045304	149261713	XM_001474024.1	LOC100045304	XP_001474074.1	ILMN_1237729	004210072	S	3178	TGTATGCTGAACGCTACGCGTAAAACACGCGTCTAAAAACTGCCCCCTCC					PREDICTED: Mus musculus similar to neurofilament protein (LOC100045304), mRNA.					
Mus musculus	RefSeq	ILMN_197700	ILMN_197700	LOC223586	XM_128266.4	XM_128266.4			38077458	XM_128266.4	LOC223586		ILMN_2529057	004010639	S	1657	GGACCTTTTCAACAGAAACAACTGCCAGATCTGTGGGACCCAGCGGTTCC										
Mus musculus	Riken	ILMN_203941	ILMN_203941	A330058L12RIK	ri|A330058L12|PX00132F01|AK039545|1592					AK039545	A330058L12Rik		ILMN_2561159	003520703	S	1304	CTGGGCCACAGCTAGAGAGGTTCCAGGAATAGTCAGTCAAATGCCCTGCA										
Mus musculus	RefSeq	ILMN_215419	ILMN_215419	FOXRED1	NM_172291.1	NM_172291.1		235169	26986604	NM_172291.1	Foxred1	NP_758495.1	ILMN_2756957	001710646	S	1060	GGTTGCAGACATTAGTGGAGTCTATTTCCGACGGGAAGGATTGGGCAGCA	9	-	35013202-35013251	9qA4	Mus musculus FAD-dependent oxidoreductase domain containing 1 (Foxred1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC38853; BC024806	MGC38853; BC024806
Mus musculus	RefSeq	ILMN_215419	ILMN_215419	FOXRED1	NM_172291.1	NM_172291.1		235169	26986604	NM_172291.1	Foxred1	NP_758495.1	ILMN_2711754	003290608	S	614	CTGCAGACCAAGTTTCCCTGGATAAACGTAGAAGGAGTAGCTCTGGCGTC	9	-	35015481-35015530	9qA4	Mus musculus FAD-dependent oxidoreductase domain containing 1 (Foxred1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC38853; BC024806	MGC38853; BC024806
Mus musculus	RefSeq	ILMN_215419	ILMN_215419	FOXRED1	NM_172291.1	NM_172291.1		235169	26986604	NM_172291.1	Foxred1	NP_758495.1	ILMN_1237151	003390382	S	610	CAGCTGCAGACCAAGTTTCCCTGGATAAACGTAGAAGGAGTAGCTCTGGC	9	-	35015485-35015534	9qA4	Mus musculus FAD-dependent oxidoreductase domain containing 1 (Foxred1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC38853; BC024806	MGC38853; BC024806
Mus musculus	RefSeq	ILMN_215419	ILMN_215419	FOXRED1	NM_172291.1	NM_172291.1		235169	26986604	NM_172291.1	Foxred1	NP_758495.1	ILMN_2832886	002470600	S	1970	CCATTAAAAAGGCAGCTTTGGGGGCTGGAGAGATGGTTAAGAGCACTGAC	9	-	35011950-35011999	9qA4	Mus musculus FAD-dependent oxidoreductase domain containing 1 (Foxred1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC38853; BC024806	MGC38853; BC024806
Mus musculus	RefSeq	ILMN_215419	ILMN_215419	FOXRED1	NM_172291.1	NM_172291.1		235169	26986604	NM_172291.1	Foxred1	NP_758495.1	ILMN_2832884	002810162	S	1795	CAGGACTGGCCTCCTTCCTGGTGCTGATGCAGAGAAATCTGACCAGAGCC	9	-	35012125-35012174	9qA4	Mus musculus FAD-dependent oxidoreductase domain containing 1 (Foxred1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC38853; BC024806	MGC38853; BC024806
Mus musculus	RefSeq	ILMN_188391	ILMN_243556	TRUB2	NM_145520.3	NM_145520.3		227682	141803129	NM_145520.3	Trub2	NP_663495.2	ILMN_1221572	007200181	S	1074	AGAGAAGAAGTTGACTCTCAGAGCCACCAATGTACCCTCCCTCACCACCC	2	-	29642004-29642053	2qB	Mus musculus TruB pseudouridine (psi) synthase homolog 2 (E. coli) (Trub2), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]	G430055L02Rik	G430055L02Rik
Mus musculus	RefSeq	ILMN_201540	ILMN_201540	V2R14	NM_009489.1	NM_009489.1			6678534	NM_009489.1	V2r14		ILMN_1247409	002340736	S	1363	GGCTGATAATCAGGCAATAGACAATGGGAAAAAGGAGCCCAGTTCCTCCC										
Mus musculus	Riken	ILMN_203166	ILMN_203166	9930104O17RIK	ri|9930104O17|PX00062D08|AK037055|3430					AK037055	9930104O17Rik		ILMN_1239634	001400093	S	2547	GAAGCAAGAGATAGAGCTTGTGGTCAGCAGGCCTAGTGGGGGCAGCTAGC										
Mus musculus	Riken	ILMN_204102	ILMN_204102	SEMA6A	ri|A730020P05|PX00149A22|AK042751|3226					AK042751	Sema6a		ILMN_1214701	001260484	S	2891	GACGCCGGGGTTTTGTGAGGCAAGCATGTGCTGTGTAGCATGAAAATGGC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence NAS]; Any process by which a centrosome is transported to, and/or maintained in, a specific location within the cell [goid 51642] [evidence IMP]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with semaphorin receptors [goid 30215] [evidence IPI]; Interacting selectively with semaphorin receptors [goid 30215] [evidence IGI]		
Mus musculus	RefSeq	ILMN_190543	ILMN_261805	MAEA	NM_021500.2	NM_021500.2		59003	120407042	NM_021500.2	Maea	NP_067475.2	ILMN_2763602	005130630	S	522	CGTGAGACAGCCACCTGCCTTGCCTGGTGCCATGATAACAAGTCCCGACT	5	+	33705404-33705453	5qB1	Mus musculus macrophage erythroblast attacher (Maea), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IDA]	A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IMP]; The process aimed at the progression of an enucleate erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48822] [evidence IMP]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IDA]	EMP; 1110030D19Rik	EMP; 1110030D19Rik
Mus musculus	RefSeq	ILMN_195032	ILMN_195032	TNFAIP8	NM_134131.1	NM_134131.1		106869	19527361	NM_134131.1	Tnfaip8	NP_598892.1	ILMN_2511953	004040440	S	1285	GCAGTGTCCATTGCAAGAGTGTGTTTTTGAAGCTGACTTCTACCTTTTAG	18	+	50251038-50251087	18qD1	Mus musculus tumor necrosis factor, alpha-induced protein 8 (Tnfaip8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		E130304C20Rik; Gg2-1; Ssc-2; Nded; AA987150	E130304C20Rik; Gg2-1; Ssc-2; Nded; AA987150
Mus musculus	RefSeq	ILMN_209163	ILMN_209163	RNASEK	NM_173742.2	NM_173742.2		52898	142349970	NM_173742.2	Rnasek	NP_776103.1	ILMN_2593134	004760482	S	209	TTTCAATGTCCATTCTGCTGTGTTAATTGAGGACGTTCCCTTCACAGAGA	11	-	70053203-70053235:70053215-70053231	11qB3	Mus musculus ribonuclease, RNase K (Rnasek), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	2310033H11Rik; AA571397; RP23-198E14.6	2310033H11Rik; AA571397; RP23-198E14.6
Mus musculus	RefSeq	ILMN_223086	ILMN_223086	IGSF1	NM_177915.3	NM_177915.3		209268	142343783	NM_177915.3	Igsf1	NP_808583.1	ILMN_2759192	004220370	S	800	GCCACGGCTGCTGGCATCTGACAATTGTTATCCCAGGGATCATGGCTGGT	X	-	47147021-47147070	XqA5	Mus musculus immunoglobulin superfamily, member 1 (Igsf1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	InhBP/p120; 5530402E03; 5330413N23; AI747649; mKIAA0364	InhBP/p120; 5530402E03; 5330413N23; AI747649; mKIAA0364
Mus musculus	RefSeq	ILMN_197202	ILMN_197202	LOC381353	XM_355318.1	XM_355318.1			38074570	XM_355318.1	LOC381353		ILMN_2527276	005870477	S	3065	GCCGGCGCGCACGTGAAGTAGCCTTCATCCATATCCAACGTGAGCTTCGA										
Mus musculus	Riken	ILMN_206162	ILMN_206162	TSC1	ri|C920023H23|PX00178M21|AK083363|2389					AK083363	Tsc1		ILMN_1225372	007380682	S	1978	CCTGCCTTGTACCTGTTAGAGTGGGGACTGCACTGGCTGCTTTGCTTCCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IGI]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IGI]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IMP]; Any process that reduces cell size [goid 45792] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IMP]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IMP]	Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [evidence IPI]		
Mus musculus	RefSeq	ILMN_214266	ILMN_310156	LOC620678	XR_031536.1	XR_031536.1		620678	149261868	XR_031536.1	LOC620678		ILMN_2646163	006940092	S	301	GGCCAGGATGGCAAGGAAAGCTGGCAACTTCTATGTGCCCGCAGAACCAA	11	+	46541598-46541647	11qB1.1	PREDICTED: Mus musculus similar to 60S ribosomal protein L7 (LOC620678), misc RNA.					
Mus musculus	RefSeq	ILMN_192618	ILMN_328868	LOC100043684	XM_001480957.1	XM_001480957.1		100043684	149251449	XM_001480957.1	LOC100043684	XP_001481007.1	ILMN_2489759	006130324	S	3646	TGTCATGAATTCCTGTTCTTATTGTATGAGAAATTGCAATCACATTCAGT	3	-	113082782-113082831	3qF3	PREDICTED: Mus musculus similar to Amylase 2, pancreatic (LOC100043684), mRNA.					
Mus musculus	RefSeq	ILMN_209966	ILMN_246350	PPP1R12A	NM_027892.2	NM_027892.2		17931	141803586	NM_027892.2	Ppp1r12a	NP_082168.1	ILMN_2600911	004010110	S	1864	GAAAAGGACAGTGCTCCTACTGCAGTGACCATTCCTGTGGCTCCAACTGT	10	+	107690421-107690470	10qD1	Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit 12A (Ppp1r12a), mRNA. XM_902141 XM_902142 XM_902144 XM_917742 XM_925188 XM_925191 XM_925192 XM_925193 XM_925194 XM_925196 XM_980036 XM_980115 XM_980151 XM_980190 XM_980228 XM_980267 XM_980310 XM_980352 XM_980388	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence ISO]	1200015F06Rik; AV099298; MGC159084; AA792106; D10Ertd625e; Mypt1; 5730577I22Rik	1200015F06Rik; AV099298; MGC159084; AA792106; D10Ertd625e; Mypt1; 5730577I22Rik
Mus musculus	RefSeq	ILMN_197990	ILMN_197990	LOC231227	XM_124519.3	XM_124519.3			38080001	XM_124519.3	LOC231227		ILMN_1242631	004280070	S	76	CCTAGGCCACGGTGGCGTTCGCCTATCTCTTCAAGTACATCAGCCAGCGA										
Mus musculus	RefSeq	ILMN_221643	ILMN_221643	1200003I07RIK	NM_181274.3	NM_181274.3		66869	90577172	NM_181274.3	1200003I07Rik	NP_851791.1	ILMN_3135697	002850082	A	2960	GTCACCTGGGAAAGGAGTCTCACTAGTGACCTGTCTGAGTTAGGTTCGCC	8	-	72229274-72229323	8qB3.3	Mus musculus RIKEN cDNA 1200003I07 gene (1200003I07Rik), transcript variant 3, mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	MEEBO	ILMN_196192	ILMN_196192	2810402E24RIK	scl46594.4.369_22						2810402E24Rik		ILMN_1251628	006290082	S	15	CCCGGGTGCCCCGCCCCATCAATTTTCGAGACCAAAATAGGAAATAAGTC										
Mus musculus	RefSeq	ILMN_196759	ILMN_196759	IFNA1	NM_010502.1	NM_010502.1			6754289	NM_010502.1	Ifna1		ILMN_1233604	004070047	S	350	ATGACCTGCAAGGTTGTCTGATGCAGCAGGTGGGGGTGCAGGAATTTCCC						That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]	 [goid 5126] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]		
Mus musculus	RefSeq	ILMN_211786	ILMN_211786	PLEKHA6	NM_182930.1	NM_182930.1		240753	33636692	NM_182930.1	Plekha6	NP_891846.1	ILMN_2778181	002490390	S	5431	GTTAGGGCTTTCCCCGTCGTTGTCTCTCCTTTTTTTAAAAAGTGGTATTT	1	+	135181957-135181963:135182824-135182866	1qE4	Mus musculus pleckstrin homology domain containing, family A member 6 (Plekha6), mRNA.				AU042621; Pepp3	AU042621; Pepp3
Mus musculus	RefSeq	ILMN_211786	ILMN_211786	PLEKHA6	NM_182930.1	NM_182930.1		240753	33636692	NM_182930.1	Plekha6	NP_891846.1	ILMN_2870522	002260021	S	5240	GGGACTCTGGATCGGGAGGATTCCACCTGTTTTTGCCTCTCTCTGGCTTC	1	+	135181511-135181560	1qE4	Mus musculus pleckstrin homology domain containing, family A member 6 (Plekha6), mRNA.				AU042621; Pepp3	AU042621; Pepp3
Mus musculus	RefSeq	ILMN_246573	ILMN_246573	IL20RB	NM_001037246.1	NM_001037246.1		213208	82524393	NM_001037246.1	Il20rb	NP_001032323.1	ILMN_3155812	001450193	A	603	CATTCCGGTGCACCTAGAAACCATGGAACCGGGGGCCATGTACTGTGTGA	9	-	100366703-100366752	9qE3.3	Mus musculus interleukin 20 receptor beta (Il20rb), transcript variant 1, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Fndc6; Gm186; MGC130209; AV228068	Fndc6; Gm186; MGC130209; AV228068
Mus musculus	RefSeq	ILMN_246573	ILMN_246573	IL20RB	NM_001037246.1	NM_001037246.1		213208	82524393	NM_001037246.1	Il20rb	NP_001032323.1	ILMN_3076900	006480438	I	833	CAGGCTTGCTTCCAGGCTTGGTGGGTTCTAAGGTAAACTCCGACTCCCCC	9	-	100366473-100366522	9qE3.3	Mus musculus interleukin 20 receptor beta (Il20rb), transcript variant 1, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Fndc6; Gm186; MGC130209; AV228068	Fndc6; Gm186; MGC130209; AV228068
Mus musculus	RefSeq	ILMN_198950	ILMN_246573	IL20RB	NM_001037246.1	NM_001037246.1		213208	82524393	NM_001037246.1	Il20rb	NP_001032323.1	ILMN_1221277	006480661	S	926	CAGTTGACTGGAACTGCCCCCAAAGTTACCTCCTCGTGGGGCACATTGTT	9	-	100366380-100366429	9qE3.3	Mus musculus interleukin 20 receptor beta (Il20rb), transcript variant 1, mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Fndc6; Gm186; MGC130209; AV228068	Fndc6; Gm186; MGC130209; AV228068
Mus musculus	RefSeq	ILMN_209911	ILMN_310534	LOC225134	XR_031257.1	XR_031257.1		225134	149269568	XR_031257.1	LOC225134		ILMN_1228717	003710753	S	584	GGTGACTGGAGGTGCTAACTTGGGAAGAATTGGTGTAATCACCAACAGAG				18qA1	PREDICTED: Mus musculus similar to ribosomal protein S4, X-linked (LOC225134), misc RNA.					
Mus musculus	Riken	ILMN_207111	ILMN_207111	LARGE	ri|6720471N15|PX00649J03|AK078444|3490					AK078444	Large		ILMN_1219732	000010291	S	3153	GCTGAAGAACTGGTATGTGCATTTATGCCTGGCTTTTTATGTCGGTGCTG						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [evidence NAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence NAS]		
Mus musculus	RefSeq	ILMN_201547	ILMN_319321	LOC100041137	XR_032462.1	XR_032462.1		100041137	149256085	XR_032462.1	LOC100041137		ILMN_1255998	003140307	S	1763	CCCATCTCTCAGGCATCTACAGGTGCTGTGGTGCTCAAGATTAATCTTTC	7	-	3711626-3711675	7qA1	PREDICTED: Mus musculus similar to PIRA2 (LOC100041137), misc RNA.					
Mus musculus	RefSeq	ILMN_201547	ILMN_319321	LOC100041137	XR_032462.1	XR_032462.1		100041137	149256085	XR_032462.1	LOC100041137		ILMN_1256025	004180048	S	1682	CGGCCCAGCAACCCCTGCGATTAAAATCAAAGTCCCATGATCAGCAGTCC	7	-	3711707-3711756	7qA1	PREDICTED: Mus musculus similar to PIRA2 (LOC100041137), misc RNA.					
Mus musculus	RefSeq	ILMN_215370	ILMN_215370	STRAP	NM_011499.2	NM_011499.2		20901	141802079	NM_011499.2	Strap	NP_035629.1	ILMN_1212636	006770187	S	1251	GGCATATGAGTTAGCTCCAGTGCACGAACAGCTACTCAGTGTTGCCCGTG	6	+	137699245-137699294	6qG1	Mus musculus serine/threonine kinase receptor associated protein (Strap), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]	C78091; C79202; AW557906; Unrip	C78091; C79202; AW557906; Unrip
Mus musculus	RefSeq	ILMN_222336	ILMN_222336	OLFR862	NM_146562.1	NM_146562.1		258555	22129520	NM_146562.1	Olfr862	NP_666773.1	ILMN_2748183	005570195	S	803	CCAGGGAAAATATGCTGGCTTCAGTAATATATACCATGAGAGTTCCCATG	9	-	19687895-19687944	9qA3	Mus musculus olfactory receptor 862 (Olfr862), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR146-1	MOR146-1
Mus musculus	RefSeq	ILMN_222961	ILMN_222961	SPEER8-PS1	NR_001584.1	NR_001584.1		74062	38093633	NR_001584.1	Speer8-ps1		ILMN_2879940	004390070	S	745	CCCCCACCTCCGAAAAAACCAACACCCCAGAAGTAGCAATAGAATCCCCC	5	+	14984171-14984220	5qA1-qA2	Mus musculus spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1 (Speer8-ps1) on chromosome 5.				4933405L09Rik; Speer8-ps; SPEER-8	4933405L09Rik; Speer8-ps; SPEER-8
Mus musculus	RefSeq	ILMN_219636	ILMN_219636	PDXP	NM_020271.3	NM_020271.3		57028	85838507	NM_020271.3	Pdxp	NP_064667.2	ILMN_1228470	006290427	S	1762	GTGTGGAGAGGTTCCCACTCATACCTTAGCACCGTCCAGTGTTGATGGCT	15	+	78749708-78749757	15qE1	Mus musculus pyridoxal (pyridoxine, vitamin B6) phosphatase (Pdxp), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: pyridoxal 5'-phosphate + H2O = pyridoxal + phosphate [goid 33883] [evidence IEA]	1600027H05Rik; AB041662; PLPP	1600027H05Rik; AB041662; PLPP
Mus musculus	RefSeq	ILMN_199520	ILMN_199520	LOC383607	XM_357150.1	XM_357150.1			38073937	XM_357150.1	LOC383607		ILMN_2535513	003610369	S	81	GGGTGAACTGGAAACCCCAACTCCTACCCAAAGAGAGGAGGCAGAGTCAA										
Mus musculus	Riken	ILMN_202913	ILMN_202913	4732470M22RIK	ri|4732470M22|PX00051B14|AK028922|3679					AK028922	4732470M22Rik		ILMN_2553280	002120102	S	3097	GCCCATGAAGTGATAGGCCCTCCCATAGACACCAGAGAGCAGAAGCCCAA										
Mus musculus	MEEBO	ILMN_192796	ILMN_192796	AW125391	scl27161.17.1_10				31343500	NM_178897	AW125391		ILMN_2730138	001340500	S	4290	GGGTCGTGTACACTCACGTTCCCAGTACTCCTTAGAAGTGCTCAAGACAC										
Mus musculus	RefSeq	ILMN_211788	ILMN_249395	ABPE	NM_207262.2	NM_207262.2		381970	154090956	NM_207262.2	Abpe	NP_997145.2	ILMN_1214113	000270520	S	127	CAGGATTGGGTTACATACAGAACTTGCTCCATTTGATCCTACTGTGGAGG				7qB1	Mus musculus androgen binding protein epsilon (Abpe), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	lacrimal	lacrimal
Mus musculus	RefSeq	ILMN_258305	ILMN_258305	OLFR1490	NM_001011832.1	NM_001011832.1		258098	58801427	NM_001011832.1	Olfr1490	NP_001011832.1	ILMN_3162398	006110195	S	645	CACCACCTATGCCTTGATAGTGGCTGCTGTGCTCAAACTCCACTCAGCAG	19	+	13729580-13729629	19qA	Mus musculus olfactory receptor 1490 (Olfr1490), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR266-6P	MOR266-6P
Mus musculus	RefSeq	ILMN_256633	ILMN_256633	KCNG1	NM_001081134.1	NM_001081134.1		241794	124487486	NM_001081134.1	Kcng1	NP_001074603.1	ILMN_2990269	000630553	S	1065	CGCAAGCCGAGCACCGGCAACAGCTACCTGGACAAGGTTGGGCTAGTGCT	2	-	168088399-168088448	2qH3	Mus musculus potassium voltage-gated channel, subfamily G, member 1 (Kcng1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	RP23-391M18.5	RP23-391M18.5
Mus musculus	Riken	ILMN_207054	ILMN_207054	4832412D13RIK	ri|4832412D13|PX00102L05|AK076431|2679					AK076431	4832412D13Rik		ILMN_1223768	007510427	S	2467	GTCTGAGCCTCTTCCTCCCAGCATTGTGTTGATGGTGAATACAGGGTTCG										
Mus musculus	RefSeq	ILMN_199796	ILMN_199796	LOC383942	XM_357338.1	XM_357338.1			38077438	XM_357338.1	LOC383942		ILMN_2536518	002350327	S	486	GAACAAGTCTGCTACCTCTTCATCCCCAGGAAGCCCACTACATAGTTTGG										
Mus musculus	RefSeq	ILMN_243474	ILMN_243474	OTTMUSG00000020946	NM_001040027.1	NM_001040027.1		654464	91064862	NM_001040027.1	OTTMUSG00000020946	NP_001035116.1	ILMN_2895546	007040402	S	70	CCTGAGTATGGTAGCTTGGATTTGAGGAAAGAATGCAAAATGCGTAGAGG	1	-	18250683-18250732	1qA3	Mus musculus predicted gene, OTTMUSG00000020946 (OTTMUSG00000020946), mRNA.				Defb17	Defb17
Mus musculus	RefSeq	ILMN_212030	ILMN_212030	KRT4	NM_008475.2	NM_008475.2		16682	133778952	NM_008475.2	Krt4	NP_032501.2	ILMN_2621930	004920438	S	1896	CCCCAATGGACAGAGGGGATGAAGAGCAGAAACTCCTTCTGCAGATGTAC	15	-	101749153-101749202	15qF3	Mus musculus keratin 4 (Krt4), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence TAS]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence TAS]	AW108092; Krt-2.4; Krt2-4; K4	AW108092; Krt-2.4; Krt2-4; K4
Mus musculus	RefSeq	ILMN_212219	ILMN_212219	POLR2D	NM_027101.2	NM_027101.2		69241	118130324	NM_027101.2	Polr2d	NP_081377.1	ILMN_3105075	003360041	A	639	GCTTGGCTTCTGGAGAGGAAAGAAAGGCTGGCTATTGATGCTGTAGGTGC	18	+	31955996-31956045	18qB1	Mus musculus polymerase (RNA) II (DNA directed) polypeptide D (Polr2d), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	2310002G05Rik; RBP4; HSRBP4; 2610028L19Rik	2310002G05Rik; RBP4; HSRBP4; 2610028L19Rik
Mus musculus	RefSeq	ILMN_210466	ILMN_210466	PCNXL2	NM_175561.3	NM_175561.3		270109	126352571	NM_175561.3	Pcnxl2	NP_780770.2	ILMN_1251565	007560156	S	6829	GTAGGGCCCGTGACTAGCAGCTCCTTCCTGCGCTGGTTAAATTAGAACAG	8	-	128275741-128275790	8qE2	Mus musculus pecanex-like 2 (Drosophila) (Pcnxl2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			KIAA0435; Pcnxl2; mKIAA0435; A830048P05; AU067631; E330039K12Rik	KIAA0435; Pcnxl2; mKIAA0435; A830048P05; AU067631; E330039K12Rik
Mus musculus	RefSeq	ILMN_210466	ILMN_210466	PCNXL2	NM_175561.3	NM_175561.3		270109	126352571	NM_175561.3	Pcnxl2	NP_780770.2	ILMN_2688560	001050189	S	6533	GGGCCTGGATGATACGGCTTCTCAGCAGAGTACCTCCGATGAGCAGTAGT	8	-	128276037-128276038:128276039-128276086	8qE2	Mus musculus pecanex-like 2 (Drosophila) (Pcnxl2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			KIAA0435; Pcnxl2; mKIAA0435; A830048P05; AU067631; E330039K12Rik	KIAA0435; Pcnxl2; mKIAA0435; A830048P05; AU067631; E330039K12Rik
Mus musculus	MEEBO	ILMN_222401	ILMN_222401	4930584F24RIK	scl26774.7.1_229	XM_131958.2			38079600	XM_131958.2	4930584F24Rik		ILMN_2749106	007210475	S	749	CCCAGGGCATCATTATCAACCAAAGACCTGCAATAAACCAGCCATTCTCA										
Mus musculus	RefSeq	ILMN_257867	ILMN_257867	PRMT5	NM_013768.1	NM_013768.1		27374	28395024	NM_013768.1	Prmt5	NP_038796.1	ILMN_2983093	006380291	S	2240	CCGGTCTACCTAGCAAGTTTCAGGCCACCTAGGGCTACATAGTGAGACCC	14	-	53461683-53461732	14qC3	Mus musculus protein arginine N-methyltransferase 5 (Prmt5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The addition of a methyl group onto a nitrogen atom of an arginine residue in a protein [goid 35246] [evidence ISO]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence ISO]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [evidence IEA]	Jbp1; Skb1	Jbp1; Skb1
Mus musculus	RefSeq	ILMN_198371	ILMN_312858	LOC664956	XR_033733.1	XR_033733.1		664956	149255685	XR_033733.1	LOC664956		ILMN_1231010	004880575	S	560	GCAAGGAGTTCAATGCAGAGGTACATGCTCGGAAGCACACCATGGGTCAG				6qC3	PREDICTED: Mus musculus similar to ribosomal protein L5 (LOC664956), misc RNA.					
Mus musculus	RefSeq	ILMN_258534	ILMN_258534	1500005I02RIK	NM_028055.1	NM_028055.1		72014	58037272	NM_028055.1	1500005I02Rik	NP_082331.1	ILMN_2835694	006060008	S	1953	CTGGCCTTAGTGAAGGGTCCAGGGTAGTGGAAAGGTCTTGAGAGAGGGCG	11	-	114607016-114607065	11qE2	Mus musculus RIKEN cDNA 1500005I02 gene (1500005I02Rik), mRNA.					
Mus musculus	MEEBO	ILMN_191989	ILMN_191989	3230401I01RIK	scl30718.8_25				29568091	NM_026140	3230401I01Rik		ILMN_2483983	007040692	S	9	GTCTCCTTTCGATGAAGGGTGTCTGTTTTCTTCCAATTCCTGAGATCTGA										
Mus musculus	MEEBO	ILMN_217037	ILMN_217037	C920006C10RIK	scl0076740.1_108	NM_133766.1			19526981	NM_133766.1	C920006C10Rik		ILMN_2678400	001170437	S	3698	GCGATATGTACTGCACATGCTAGGGACACCACCACATGCTAAACAGAAGC										
Mus musculus	RefSeq	ILMN_210384	ILMN_210384	MMP13	NM_008607.1	NM_008607.1		17386	6678895	NM_008607.1	Mmp13	NP_032633.1	ILMN_1249336	002490131	S	1262	CCCCGCCTCATAGAAGAGGAATTCCCTGGAATTGGCAACAAAGTAGATGC	9	+	7280870-7280919	9qA1	Mus musculus matrix metallopeptidase 13 (Mmp13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IDA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MMP-13; Mmp1; Clg	MMP-13; Mmp1; Clg
Mus musculus	RefSeq	ILMN_210384	ILMN_210384	MMP13	NM_008607.1	NM_008607.1		17386	6678895	NM_008607.1	Mmp13	NP_032633.1	ILMN_2799267	002060040	S	2332	CTTGTGTGACAGGGGCTAAGGCAGAAATATTATGTAGAAGTAGATCCAGC	9	+	7283021-7283070	9qA1	Mus musculus matrix metallopeptidase 13 (Mmp13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IDA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MMP-13; Mmp1; Clg	MMP-13; Mmp1; Clg
Mus musculus	RefSeq	ILMN_210384	ILMN_210384	MMP13	NM_008607.1	NM_008607.1		17386	6678895	NM_008607.1	Mmp13	NP_032633.1	ILMN_2737685	005690131	S	2454	CCACCATGTTTGTTAATCCCTCTCTGCTTTCCTTAGCGAGTAACACTTGG	9	+	7283143-7283192	9qA1	Mus musculus matrix metallopeptidase 13 (Mmp13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IDA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IMP]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IMP]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	MMP-13; Mmp1; Clg	MMP-13; Mmp1; Clg
Mus musculus	MEEBO	ILMN_223780	ILMN_223780	PIWIL1	scl27193.23.1_209	NM_021311.2			31982692	NM_021311.2	Piwil1		ILMN_2769052	003310561	S	3879	GATGAGTTTTACACAATGGCGATGTGTGTGTGTGCCCCTGGCACAGCTCA						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with single-stranded RNA [goid 3727] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_198806	ILMN_234515	LOC233614	XR_003865.1	XR_003865.1		233614	94382599	XR_003865.1	LOC233614		ILMN_1244964	000870270	S	685	CCAAGTGGGGAGCTCCTGGAACACACGGACAAGAGCTTCAGGGAAAGCAG				7qE3	PREDICTED: Mus musculus similar to G patch domain containing 4 (LOC233614), mRNA.					
Mus musculus	Riken	ILMN_202191	ILMN_202191	EMB	ri|1700048N09|ZX00075M13|AK006732|817					AK006732	Emb		ILMN_1215842	005130747	S	47	CAGGGCCCAGGTTCCTGTAAGTTGTGCTTGTCGAGGGGACACTGTGACAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	RefSeq	ILMN_240122	ILMN_240122	PCDHGA12	NM_033595.4	NM_033595.4		93724	118130793	NM_033595.4	Pcdhga12	NP_291073.1	ILMN_2961000	002650470	S	2729	GATTGGCTGACGTTGCAGCCTCTCACTTTGTGGGCGTAGACGGAGTGCAA	18	+	37927962-37928011	18qB3	Mus musculus protocadherin gamma subfamily A, 12 (Pcdhga12), mRNA.	A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence ISS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pcdh13; pc2c	Pcdh13; pc2c
Mus musculus	RefSeq	ILMN_194094	ILMN_194094	USO1	NM_019490.1	NM_019490.1		56041	23956095	NM_019490.1	Uso1	NP_062363.1	ILMN_2503318	004290746	S	3486	GTATGTCATCCCCTCAAACCCCCACTGTGCCTCCCGAGATCAGGATGGGA	5	+	92631409-92631458	5qE2	Mus musculus USO1 homolog, vesicle docking protein (yeast) (Uso1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IDA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi [goid 48280] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	115kDa; TAP	115kDa; TAP
Mus musculus	RefSeq	ILMN_219514	ILMN_219514	NUP54	NM_183392.2	NM_183392.2		269113	114326535	NM_183392.2	Nup54	NP_899248.1	ILMN_2709901	000130064	S	241	GCCTTCAGCTTTTCAGCCCCAACAAACACAGGCAGTACAGGCCTTCTCGG	5	-	92859969-92859979:92860065-92860103	5qE2	Mus musculus nucleoporin 54 (Nup54), mRNA.	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]		54kDa; 3110079L04Rik	54kDa; 3110079L04Rik
Mus musculus	RefSeq	ILMN_216660	ILMN_216660	BC094274	NM_183424.1	NM_183424.1		227717	34556200	NM_183424.1	BC094274	NP_906269.1	ILMN_2824999	001240341	S	2479	GGGATGCCCACCTGCTTCTGTGGGGCAGTACCCTGGCTCATTCATACACA	2	-	31628511-31628560	2qB	Mus musculus cDNA sequence BC094274 (BC094274), mRNA.				QRFP; P518	QRFP; P518
Mus musculus	RefSeq	ILMN_194682	ILMN_194682	ZFP451	NM_133817.2	NM_133817.2		98403	142370012	NM_133817.2	Zfp451	NP_598578.1	ILMN_2508639	003360093	S	3514	TTGGGTTACAGCCGTTTTCTAGGAGGAAAGGTGTGTAAAGTTCTCTTTCC	1	-	33818684-33818733	1qB	Mus musculus zinc finger protein 451 (Zfp451), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AI596398; Kiaa0576-hp; COASTER; mKIAA1702; 4930515K21Rik; 4933435G09Rik	AI596398; Kiaa0576-hp; COASTER; mKIAA1702; 4930515K21Rik; 4933435G09Rik
Mus musculus	RefSeq	ILMN_223677	ILMN_223677	SAV1	NM_022028.2	NM_022028.2		64010	118130409	NM_022028.2	Sav1	NP_071311.1	ILMN_2767596	006330520	S	2008	GCGCAACTGTTGCTAATACGGCTTCCTTCCTTTGAGGCAGAGCACATAAG	12	-	71066465-71066514	12qC2	Mus musculus salvador homolog 1 (Drosophila) (Sav1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Wwp3; Sav; 1700040G09Rik; Wwp4; WW45	Wwp3; Sav; 1700040G09Rik; Wwp4; WW45
Mus musculus	RefSeq	ILMN_193744	ILMN_257215	FAM173B	NM_026546.3	NM_026546.3		68073	146134910	NM_026546.3	Fam173b	NP_080822.1	ILMN_1224980	005260343	S	962	TCCTGGATAGGGTGCATGAAGATATAAGTAAGGGACCGTCTGTCTGTGGG				15qB2	Mus musculus family with sequence similarity 173, member B (Fam173b), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			AA987072	AA987072
Mus musculus	RefSeq	ILMN_212421	ILMN_212421	ARPC5L	NM_028809.1	NM_028809.1		74192	21312653	NM_028809.1	Arpc5l	NP_083085.1	ILMN_2626260	005900253	S	954	CTGCTGCATCAATAAAGCTCTTGGCTTATTAGTCTATTCATCGCGGTGTG	2	+	38871075-38871124	2qB	Mus musculus actin related protein 2/3 complex, subunit 5-like (Arpc5l), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AW742746; AW555592; ARC16-2; AI852867; 2010015J01Rik	AW742746; AW555592; ARC16-2; AI852867; 2010015J01Rik
Mus musculus	RefSeq	ILMN_190502	ILMN_249640	MED28	NM_025895.3	NM_025895.3		66999	84579899	NM_025895.3	Med28	NP_080171.1	ILMN_2637365	003390259	S	662	GGTGTGTTGGAAGGACTCTGTTGGATAATGAGTTTGTATCAGTTTCTGTC	5	+	45916640-45916689	5qB3	Mus musculus mediator of RNA polymerase II transcription, subunit 28 homolog (yeast) (Med28), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Eg1; FKSG20; magicin; 1500003D12Rik; AU045690; AI451633	Eg1; FKSG20; magicin; 1500003D12Rik; AU045690; AI451633
Mus musculus	RefSeq	ILMN_197010	ILMN_197010	LOC240779	XM_136256.4	XM_136256.4			38073466	XM_136256.4	LOC240779		ILMN_1239957	007160367	S	911	TCCTGGGCCTTCCCATTAATCTCTGGGGCCAAGATCTGTTATCCCAGCTG										
Mus musculus	RefSeq	ILMN_209495	ILMN_209495	DCN	NM_007833.4	NM_007833.4		13179	145966821	NM_007833.4	Dcn	NP_031859.1	ILMN_2596346	004280139	S	676	CACCAAGCTGCGGAAATCCGACTTCAATGGACTGAACAATGTGCTTGTCA				10qC3	Mus musculus decorin (Dcn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PGII; DSPG2; mDcn; DC; PGS2; SLRR1B; PG40	PGII; DSPG2; mDcn; DC; PGS2; SLRR1B; PG40
Mus musculus	RefSeq	ILMN_209495	ILMN_209495	DCN	NM_007833.4	NM_007833.4		13179	145966821	NM_007833.4	Dcn	NP_031859.1	ILMN_2747959	005390328	S	1235	GTGCGTTCTGCCATTCAACTTGGAAACTACAAGTAACCCTCAGACGGCCT				10qC3	Mus musculus decorin (Dcn), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PGII; DSPG2; mDcn; DC; PGS2; SLRR1B; PG40	PGII; DSPG2; mDcn; DC; PGS2; SLRR1B; PG40
Mus musculus	RefSeq	ILMN_210665	ILMN_210665	BCAT2	NM_009737.1	NM_009737.1		12036	33859513	NM_009737.1	Bcat2	NP_033867.1	ILMN_2794608	007200324	S	1232	GACGTGCCGCATCTAGTCCAGCGTCCTCGCTTCCCAGAGACTCAAGAGAA	7	+	45457423-45457472	7qB4	Mus musculus branched chain aminotransferase 2, mitochondrial (Bcat2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9082] [evidence IEA]; The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9081] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine [goid 9083] [evidence IMP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid. Includes catalysis of the reaction: L-leucine + 2-oxoglutarate = 4-methyl-2-oxopentanoate + L-glutamate and anaologous reactions involving L-isoleucine and L-valine [goid 4084] [evidence IDA]	Bcat-2; Eca40	Bcat-2; Eca40
Mus musculus	RefSeq	ILMN_198377	ILMN_198377	LOC381189	XM_355118.1	XM_355118.1			38084744	XM_355118.1	LOC381189		ILMN_1217310	002600678	S	750	GGGAATCCGAACGGGATATACGGAGGCTGCAACTCATTCTGCTGTACTGC										
Mus musculus	RefSeq	ILMN_215570	ILMN_215570	MAGED1	NM_019791.2	NM_019791.2		94275	118130592	NM_019791.2	Maged1	NP_062765.1	ILMN_2661125	001780156	S	2607	CAAAACACGCTATCTAGAGAGCCACATCCTGTTGACTGAGAGTGGCATGC	X	-	91780908-91780957	XqC3	Mus musculus melanoma antigen, family D, 1 (Maged1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IDA]	FLJ00163; 5430405L04Rik; Dlixin; 2810433C11Rik; DXBwg1492e; NRAGE; Dlxin1; mFLJ00163; Dlxin-1	FLJ00163; 5430405L04Rik; Dlixin; 2810433C11Rik; DXBwg1492e; NRAGE; Dlxin1; mFLJ00163; Dlxin-1
Mus musculus	RefSeq	ILMN_215260	ILMN_215260	DDX26B	NM_172779.1	NM_172779.1		236790	27370147	NM_172779.1	Ddx26b	NP_766367.1	ILMN_1224487	002710400	S	3454	GGGGGAGTCAGCAAACAATCTACCTCGAGTGCTCTTCCACTTTGACTAGG	X	+	52854311-52854360	XqA5	Mus musculus DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B (Ddx26b), mRNA.				6330505F04Rik; 4930535D10Rik; D130066O12	6330505F04Rik; 4930535D10Rik; D130066O12
Mus musculus	RefSeq	ILMN_211017	ILMN_211017	OLFR1512	NM_146432.1	NM_146432.1		258424	33239053	NM_146432.1	Olfr1512	NP_666643.1	ILMN_2611621	004120086	S	725	GTGGAGCTCATGTGACTATTGTTACTGTGTACTATGTGCCCTGTGCCTTC	14	-	52991952-52992001	14qC2	Mus musculus olfactory receptor 1512 (Olfr1512), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR223-5	MOR223-5
Mus musculus	MEEBO	ILMN_186011	ILMN_186011	HIRA	scl49353.1.1_15				52426779	NM_001005228	Hira		ILMN_1255703	001850259	S	16	ATCCATTTGTCTGAATGGAGCTCTGTGGAAGCCCAGAGCAGGTCAGCAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_186011	ILMN_186011	HIRA	scl49353.1.1_15				52426779	NM_001005228	Hira		ILMN_2431853	000830301	S	18	CCATTTGTCTGAATGGAGCTCTGTGGAAGCCCAGAGCAGGTCAGCAGCTA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IMP]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_186320	ILMN_186320	TRIM21	scl30939.9.1_69	NM_009277.2			31560637	NM_009277.2	Trim21		ILMN_1214544	003840634	S	1	GGAACAAATGAAAGCCAGGATAAAGTAGTGAAAGTGGTTCAGACAAGAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Mus musculus	RefSeq	ILMN_208985	ILMN_208985	RHEBL1	NM_026967.3	NM_026967.3		69159	34328496	NM_026967.3	Rhebl1	NP_081243.1	ILMN_2591469	004900343	S	1089	GAGTCTTGTGCATTGATTACCCAGGACCCACCCTCCTGGGTAGGTTTTGG	15	-	98708265-98708314	15qF1	Mus musculus Ras homolog enriched in brain like 1 (Rhebl1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	1810036J22Rik	1810036J22Rik
Mus musculus	MEEBO	ILMN_186129	ILMN_186129	MJ-250-27_148	MJ-250-27_148						MJ-250-27_148		ILMN_2432854	000290327	S	19	TATAATTACAAAAATCTTCTTTTATATTTGGCAAATAGGTTTGGAAATTT										
Mus musculus	RefSeq	ILMN_184350	ILMN_231770	LOC665506	XM_977361.1	XM_977361.1		665506	94377297	XM_977361.1	LOC665506	XP_982455.1	ILMN_2417926	006760735	S	739	CTCTTCTTCCTCCATGGATATCCATCCTTCCTCGTTGACACCTTGACTCT	6	+	41477876-41477925		PREDICTED: Mus musculus similar to T-cell receptor beta-2 chain C region (LOC665506), mRNA.					
Mus musculus	MEEBO	ILMN_189255	ILMN_189255	MYH6	scl46291.1.1_325				31981615	NM_010856	Myh6		ILMN_2640008	002230035	S	5010	ATAGCCTCAGAGGCACAGAAACACCTGAAGAATTCTCAAGCTCACTTGAA						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IDA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The process whose specific outcome is the progression of the visceral muscle over time, from its formation to the mature structure [goid 7522] [evidence IMP]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IMP]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IMP]; The process whose specific outcome is the progression of cardiac muscle fiber over time, from its formation to the mature structure [goid 48739] [evidence IMP]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IMP]; Any process that modulates the rate of ATP hydrolysis by an ATPase [goid 43462] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IMP]; Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	MEEBO	ILMN_190754	ILMN_190754	D030028O16RIK	scl49543.1.824_2				31981860	NM_145984	D030028O16Rik		ILMN_1254104	002630376	S	7	GAAGCTTCAGTTAACATGCATAAAGATTTGTGGGGTTTGGTGGACTCTTC										
Mus musculus	RefSeq	ILMN_189008	ILMN_232224	LOC636857	XM_912393.2	XM_912393.2		636857	94377649	XM_912393.2	LOC636857	XP_917486.2	ILMN_2457566	003450048	S	16	CAGATTATCAGCTTCCTGCTAATCATTGTCACAGTCATAATGTCCAGAGG					PREDICTED: Mus musculus similar to Ig kappa chain V-IV region S107B precursor (LOC636857), mRNA.					
Mus musculus	MEEBO	ILMN_212192	ILMN_212192	2700090O03RIK	scl34944.2.274_63	XM_150062.1			20861920	XM_150062.1	2700090O03Rik		ILMN_2623807	004590544	S	527	CATGTGAAATGTGCACTCTTGTGTATGTATCCTCATTAAATATGCAGTCC										
Mus musculus	RefSeq	ILMN_185224	ILMN_257425	DHX58	NM_030150.2	NM_030150.2		80861	70608132	NM_030150.2	Dhx58	NP_084426.2	ILMN_1222039	005720397	S	2046	GGCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACCAGTCTTCGATATCC	11	-	100556514-100556563	11qD	Mus musculus DEXH (Asp-Glu-X-His) box polypeptide 58 (Dhx58), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	B430001I08Rik; RP23-390D17.5; Lgp2; D11Lgp2e; LPG2	B430001I08Rik; RP23-390D17.5; Lgp2; D11Lgp2e; LPG2
Mus musculus	RefSeq	ILMN_257425	ILMN_257425	DHX58	NM_030150.2	NM_030150.2		80861	70608132	NM_030150.2	Dhx58	NP_084426.2	ILMN_2915689	006330592	S	2040	GATCCAGGCCAAAAAGTGGTCCCGGGTGCCTTTCTCCATACCAGTCTTCG	11	-	100556520-100556569	11qD	Mus musculus DEXH (Asp-Glu-X-His) box polypeptide 58 (Dhx58), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	B430001I08Rik; RP23-390D17.5; Lgp2; D11Lgp2e; LPG2	B430001I08Rik; RP23-390D17.5; Lgp2; D11Lgp2e; LPG2
Mus musculus	RefSeq	ILMN_211939	ILMN_211939	6820408C15RIK	NM_177656.3	NM_177656.3		228778	142385521	NM_177656.3	6820408C15Rik	NP_808324.1	ILMN_1245721	003370475	S	1555	GATGGTATCTCTGTTATGAATCTGACCCACAGCGCCCTCTTCTACCCCTC	2	+	152269937-152269986	2qH1	Mus musculus RIKEN cDNA 6820408C15 gene (6820408C15Rik), mRNA.				RP23-453K8.1	RP23-453K8.1
Mus musculus	MEEBO	ILMN_184312	ILMN_184312	4932415D10RIK	scl37686.5_631				27370173	NM_172789	4932415D10Rik		ILMN_1243365	005290139	S	2866	TGCGGAGGTCACTGGGTAGTTACTCAGAAAGGAGCATTCCCTCTGTCTGG										
Mus musculus	RefSeq	ILMN_217678	ILMN_313955	LOC632431	XM_001473666.1	XM_001473666.1		632431	149272202	XM_001473666.1	LOC632431	XP_001473716.1	ILMN_2734355	003360239	S	976	CCTGCCAAAGGAAACTGTCCTGCATACACAGAAGCAGATACCAAAACAAA					PREDICTED: Mus musculus similar to KIR-like receptor 1 precursor KIRL1.1 (LOC632431), mRNA.					
Mus musculus	RefSeq	ILMN_217678	ILMN_313955	LOC632431	XM_001473666.1	XM_001473666.1		632431	149272202	XM_001473666.1	LOC632431	XP_001473716.1	ILMN_1250087	002690161	S	846	GAGCCACAGTGGTAAATTCGAGGCAAAATTCCTTCTTAGTCCAATGATCC					PREDICTED: Mus musculus similar to KIR-like receptor 1 precursor KIRL1.1 (LOC632431), mRNA.					
Mus musculus	RefSeq	ILMN_221788	ILMN_240686	KALRN	XM_901576.2	XM_901576.2		545156	94400147	XM_901576.2	Kalrn	XP_906669.1	ILMN_2740362	003310224	S	4517	TATATGTTCATGGTAATTTGTAAGATATTCCTTTTCCTTATTTTGATTGC	16	-	33933067-33933116	16qB3	PREDICTED: Mus musculus kalirin, RhoGEF kinase, transcript variant 6 (Kalrn), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	MEEBO	ILMN_189568	ILMN_189568	WDR18	scl38700.8_158				31341933	NM_175450	Wdr18		ILMN_1246843	004180066	S	7	GTGCTGTCGTGAGCAACCAGGAAAGAAACTTAGAAAAGGGCAGTGACCAG						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_244372	ILMN_244372	GPR133	NM_001081342.1	NM_001081342.1		243277	124486786	NM_001081342.1	Gpr133	NP_001074811.1	ILMN_3123855	004260309	A	1587	CAACCTACAGTCCAGAGAACCCCATGTCACCCTCACAGGCTCGTCCTCCA	5	+	129645525-129645574	5qG1.3	Mus musculus G protein-coupled receptor 133 (Gpr133), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	E230012M21Rik	E230012M21Rik
Mus musculus	RefSeq	ILMN_215690	ILMN_244372	GPR133	NM_001081342.1	NM_001081342.1		243277	124486786	NM_001081342.1	Gpr133	NP_001074811.1	ILMN_1214189	003180500	S	4792	CACTGTATCCCTCCCATGCACGCTGGACTCCCACTAAAGCAAGGCAGACC	5	+	129710103-129710152	5qG1.3	Mus musculus G protein-coupled receptor 133 (Gpr133), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	E230012M21Rik	E230012M21Rik
Mus musculus	RefSeq	ILMN_211256	ILMN_211256	AV249152	NM_145425.3	NM_145425.3		216560	142385577	NM_145425.3	AV249152	NP_663400.2	ILMN_2614059	000510246	S	2359	TGTGGATTTTAATAGAAGGAAAGATAGTAGTACATGTAGCATTGCATAAG	11	+	21798605-21798654	11qA3.1	Mus musculus expressed sequence AV249152 (AV249152), mRNA.				RP23-202E24.1	RP23-202E24.1
Mus musculus	Riken	ILMN_201926	ILMN_201926	5430409I18RIK	ri|5430409I18|PX00022A20|AK017287|1500					AK017287	5430409I18Rik		ILMN_1230456	007380612	S	1045	CCTGAAAGCACCACTGTCATTTGCTACATCAGTGCAGGGCTTGGTGCCAC										
Mus musculus	RefSeq	ILMN_188631	ILMN_230099	9030612M13RIK	NM_172458.3	NM_172458.3		208292	140969611	NM_172458.3	9030612M13Rik	NP_766046.3	ILMN_2729447	003520689	S	2919	GAGCATCTTCTGCTCCTTCCAAAGGACATTGAGTTGGCCTTTAAGAGCAT	17	-	32910323-32910372	17qB1	Mus musculus RIKEN cDNA 9030612M13 gene (9030612M13Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4732483N19; AI118577; mKIAA3006	4732483N19; AI118577; mKIAA3006
Mus musculus	RefSeq	ILMN_188631	ILMN_230099	9030612M13RIK	NM_172458.3	NM_172458.3		208292	140969611	NM_172458.3	9030612M13Rik	NP_766046.3	ILMN_1257261	005090139	S	7040	GGCTATTCGTACATTGTTTGAGAATGGATTGTTTCTACTTGTGTTGATTC	17	-	32906202-32906251	17qB1	Mus musculus RIKEN cDNA 9030612M13 gene (9030612M13Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	4732483N19; AI118577; mKIAA3006	4732483N19; AI118577; mKIAA3006
Mus musculus	MEEBO	ILMN_209271	ILMN_209271	1700003M02RIK	scl24466.5.1_20	NM_027041.1			21312269	NM_027041.1	1700003M02Rik		ILMN_2594224	000840129	S	654	ACACCTCACAGGTGTACCCTTTGAAAGAGGCTAGCACCCAGTCCAAGAGA										
Mus musculus	RefSeq	ILMN_220515	ILMN_220515	B230120H23RIK	NM_178084.3	NM_178084.3		65964	141802597	NM_178084.3	B230120H23Rik	NP_835185.1	ILMN_2723072	004570682	S	1105	GAGAGTTTGCCTATGCTTGTTGTCGTCTATGGTCGAAGTGTCTGGGGGAG	2	+	72227774-72227823	2qC3	Mus musculus RIKEN cDNA B230120H23 gene (B230120H23Rik), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IDA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IDA]	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak	AV006891; MLTKalpha; RP23-146F24.1; MLTKbeta; MLTK; Zak
Mus musculus	RefSeq	ILMN_219951	ILMN_219951	KCNS1	NM_008435.2	NM_008435.2		16538	112821678	NM_008435.2	Kcns1	NP_032461.2	ILMN_2715619	003310646	S	1866	GGCGCCATCCACCTGAGCCGTCAGACATAGGGGCCACAGATCTTTCTTGA	2	-	163990151-163990200	2qH3	Mus musculus K+ voltage-gated channel, subfamily S, 1 (Kcns1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	Kv9.1	Kv9.1
Mus musculus	RefSeq	ILMN_217987	ILMN_217987	CSRP3	NM_013808.3	NM_013808.3		13009	42476047	NM_013808.3	Csrp3	NP_038836.1	ILMN_2789650	005340722	S	700	ACAGCAGTGCCACGTGATCCCACAGATGTAGTTTGTCCCCAACAGCCTCC	7	-	56085917-56085966	7qB4	Mus musculus cysteine and glycine-rich protein 3 (Csrp3), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IGI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MMLP; MLP; CRP3	MMLP; MLP; CRP3
Mus musculus	RefSeq	ILMN_217987	ILMN_217987	CSRP3	NM_013808.3	NM_013808.3		13009	42476047	NM_013808.3	Csrp3	NP_038836.1	ILMN_2789651	003140202	S	628	GTTTGGAGGGCTTACACAGCAAGTGGAAAAGAAGGAGTGAAGCTGCCTGC	7	-	56085989-56085999:56086000-56086038	7qB4	Mus musculus cysteine and glycine-rich protein 3 (Csrp3), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IGI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MMLP; MLP; CRP3	MMLP; MLP; CRP3
Mus musculus	RefSeq	ILMN_217987	ILMN_217987	CSRP3	NM_013808.3	NM_013808.3		13009	42476047	NM_013808.3	Csrp3	NP_038836.1	ILMN_2742068	002470133	S	612	GCCCCACAGGCATTGGGTTTGGAGGGCTTACACAGCAAGTGGAAAAGAAG	7	-	56086005-56086054	7qB4	Mus musculus cysteine and glycine-rich protein 3 (Csrp3), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IGI]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IGI]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	MMLP; MLP; CRP3	MMLP; MLP; CRP3
Mus musculus	Riken	ILMN_203949	ILMN_203949	A430087B05RIK	ri|A430087B05|PX00138F02|AK040322|1536					AK040322	A430087B05Rik		ILMN_1240796	000840736	S	1290	GGAGTTGATTCTGTCTTTACCATGTGGGCTCTGGGGTTGAACTCAGGTCC										
Mus musculus	RefSeq	ILMN_191330	ILMN_191330	ZP3R	NM_009581.1	NM_009581.1		22789	6677654	NM_009581.1	Zp3r	NP_033607.1	ILMN_1249370	001980438	S	1790	ATTAATAGGTCATTTAGACTTTGCAATTAGTGGACAGAGTCTCCACGCAG	1	-	132473466-132473495:132473496-132473515	1qE4	Mus musculus zona pellucida 3 receptor (Zp3r), mRNA.	A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction [goid 43159] [evidence IDA]; A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IDA]	The union of male and female gametes to form a zygote [goid 7338] [evidence IDA]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AV264399; SP56	AV264399; SP56
Mus musculus	Riken	ILMN_204018	ILMN_204018	A630032F01RIK	ri|A630032F01|PX00145I04|AK041721|3092					AK041721	A630032F01Rik		ILMN_1229075	007320653	S	2972	CCTGTCTAGTGTAGGGGATCCACTGCCCTCTTAGGACGTCCAAGTACACC										
Mus musculus	RefSeq	ILMN_218276	ILMN_313197	ATG16L2	XM_001476186.1	XM_001476186.1		73683	149257626	XM_001476186.1	Atg16l2	XP_001476236.1	ILMN_2693827	005270309	S	1939	CAAACGGCGACCTGTACATCTGGGATGTGAACACCGGGAAACTGGAGACC	7	-	108438703-108438752	7qE3	PREDICTED: Mus musculus autophagy related 16 like 2 (S. cerevisiae), transcript variant 1 (Atg16l2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Mus musculus	MEEBO	ILMN_191855	ILMN_191855	MJ-5000-158_4832	MJ-5000-158_4832						MJ-5000-158_4832		ILMN_2482794	003460475	S	7	GGTCTGCCAACAATTGGACAAATCTCTGCCCCACGCTTCCAGTAGCTCCT										
Mus musculus	RefSeq	ILMN_221372	ILMN_221372	H2-AA	NM_010378.2	NM_010378.2		14960	31981715	NM_010378.2	H2-Aa	NP_034508.2	ILMN_2734729	000650707	S	970	CTGAATTTTGTTTTCTGTCATCTTCCAAGTTACATCTACTGCAGACTCTC	17	-	34420742-34420791	17qB1	Mus musculus histocompatibility 2, class II antigen A, alpha (H2-Aa), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IDA]; The process by which an antigen-presenting cell expresses peptide antigen in association with an MHC protein complex on its cell surface, including proteolysis and transport steps for the peptide antigen both prior to and following assembly with the MHC protein complex. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein [goid 48002] [evidence IDA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence IDA]	H-2Aa; IAalpha; Ia1; H2Aa; Ia-1; Aalpha	H-2Aa; IAalpha; Ia1; H2Aa; Ia-1; Aalpha
Mus musculus	RefSeq	ILMN_210817	ILMN_253988	STT3B	NM_024222.2	NM_024222.2		68292	61651672	NM_024222.2	Stt3b	NP_077184.2	ILMN_2609516	000620113	S	4095	CTCCGGGAGAGAGAATGTTACTGCAGATCCCTTTTCCACGGTGTAGATAC	9	-	115151775-115151824	9qF3	Mus musculus STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) (Stt3b), mRNA.	A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected [goid 8250] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [evidence ISS]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a oligosaccharyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 4576] [evidence IEA]; Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Simp; 1300006C19Rik	Simp; 1300006C19Rik
Mus musculus	RefSeq	ILMN_215044	ILMN_314843	LOC100044200	XM_001471915.1	XM_001471915.1		100044200	149249344	XM_001471915.1	LOC100044200	XP_001471965.1	ILMN_1222673	005310408	S	576	TTGCTCAAATACACAAGAAGTTGAACTTATAGTTATGTTCTTTGCAGCTT					PREDICTED: Mus musculus hypothetical protein LOC100044200 (LOC100044200), mRNA.					
Mus musculus	RefSeq	ILMN_222086	ILMN_222086	HIPK3	NM_010434.1	NM_010434.1		15259	6754199	NM_010434.1	Hipk3	NP_034564.1	ILMN_1253204	000940685	S	3722	CCAGTGGGCATAAACCCCCGCCTGTTACCATCCCCAACCATTCATCAGAC	2	-	104270118-104270167	2qE2	Mus musculus homeodomain interacting protein kinase 3 (Hipk3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of JUN kinase activity [goid 43508] [evidence IMP]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISS]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISS]	DYRK6; PKY; FIST3	DYRK6; PKY; FIST3
Mus musculus	MEEBO	ILMN_187223	ILMN_187223	TREX1	scl0003558.1_1	NM_011637.4			34328199	NM_011637.4	Trex1		ILMN_2442241	004040356	S	20	TGGGGTAAGGCAGAAGAGAATAGGGTTCCCTCACCCTGAAGGTAGTCAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Interacting selectively with the mismatch repair complex MutLalpha [goid 32405] [evidence ISA]; Interacting selectively with the mismatch repair complex MutSalpha [goid 32407] [evidence ISA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IPI]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IDA]; Interacting selectively with an adenyl deoxyribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety [goid 32558] [evidence IDA]		
Mus musculus	MEEBO	ILMN_209935	ILMN_209935	A830027B17RIK	scl00319763.1_256	NM_176998.3			31560840	NM_176998.3	A830027B17Rik		ILMN_2600585	004880661	S	3862	GCTACAGTACCTTTAAGAGGGATGAGGAATGGACCGTACATGAAACACCT										
Mus musculus	MEEBO	ILMN_209935	ILMN_209935	A830027B17RIK	scl00319763.1_256	NM_176998.3			31560840	NM_176998.3	A830027B17Rik		ILMN_2726888	001500687	S	2301	TGGCTGCTAGTATGTAGAGAGTTAGAGCAGCAAGCAGGACTAAAGAGCTC										
Mus musculus	RefSeq	ILMN_219884	ILMN_224564	1110038B12RIK	XM_922038.2	XM_922038.2		68763	94402833	XM_922038.2	1110038B12Rik	XP_927131.1	ILMN_2714787	006060228	S	33	CCGTGTTTTCACCCTTCTTTGTTCTCCACCGGTCTGGGCAGGGTCTGAGG				17qB1	PREDICTED: Mus musculus RIKEN cDNA 1110038B12 gene, transcript variant 6 (1110038B12Rik), mRNA.					
Mus musculus	RefSeq	ILMN_218064	ILMN_218064	RBM43	NM_030243.2	NM_030243.2		71684	34328331	NM_030243.2	Rbm43	NP_084519.1	ILMN_2995426	006180064	S	1743	GGGGAATCTTGGGAGAAGTCTGTGCAGTGGCTTTTGTGGGTGGTTCTTGC	2	-	51746770-51746819	2qC1.1	Mus musculus RNA binding motif protein 43 (Rbm43), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	0610033I05Rik	0610033I05Rik
Mus musculus	Riken	ILMN_202579	ILMN_202579	PSMD7	ri|2700060P05|ZX00082D16|AK012463|850					AK012463	Psmd7		ILMN_1253915	001510187	S	593	GGTGTCGGCTTGTTCCTCTAAAAACGAGGCAGGTGCAGATTGGGGCCAGC						Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]				
Mus musculus	RefSeq	ILMN_200610	ILMN_200610	LOC384392	XM_357618.1	XM_357618.1			38084274	XM_357618.1	LOC384392		ILMN_2539367	006330189	S	172	AACTTCCAGGCCCCAGTGGTTACTGCCAGAGAGACAGGCAGAAGGACCAA										
Mus musculus	Riken	ILMN_203549	ILMN_203549	9330151L19RIK	ri|9330151L19|PX00105G02|AK034052|2527					AK034052	9330151L19Rik		ILMN_1256968	004780368	S	1938	GGAATGTCCACAGAACCACACCCAGGGCCTCACACCTGAGACAAGCATTC										
Mus musculus	RefSeq	ILMN_208838	ILMN_208838	2700038C09RIK	NM_025598.2	NM_025598.2		66496	141801696	NM_025598.2	2700038C09Rik	NP_079874.1	ILMN_2590015	000360603	S	173	GGGAACCCTCCGGTGTGCGGTGACCAGGGCCCACATTCTGCTCTCGTCTC	2	+	180922315-180922364	2qH4	Mus musculus RIKEN cDNA 2700038C09 gene (2700038C09Rik), mRNA.				2610317A05Rik; 0610012G23Rik; 3110053G12Rik	2610317A05Rik; 0610012G23Rik; 3110053G12Rik
Mus musculus	RefSeq	ILMN_219611	ILMN_219611	2810002I04RIK	NM_172414.2	NM_172414.2		72350	142387509	NM_172414.2	2810002I04Rik	NP_766002.1	ILMN_2711181	006860762	S	4270	CAAGCCACTCTTGACCTGCTGACAATCCTTCCTTTAATGGCTTTTCCCCC	12	+	86640158-86640207	12qD2	Mus musculus RIKEN cDNA 2810002I04 gene (2810002I04Rik), mRNA.				AV046379	AV046379
Mus musculus	RefSeq	ILMN_214693	ILMN_214693	PIGA	NM_011081.2	NM_011081.2		18700	126273665	NM_011081.2	Piga	NP_035211.2	ILMN_2721999	005390204	S	750	CCTACTGACTTCACTCCAGACCCATTTAGGAGGCATGATAGTGTAATAAC	X	+	160861211-160861260	XqF5	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class A (Piga), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI194334; Pig-a	AI194334; Pig-a
Mus musculus	RefSeq	ILMN_214693	ILMN_214693	PIGA	NM_011081.2	NM_011081.2		18700	126273665	NM_011081.2	Piga	NP_035211.2	ILMN_1218310	007160458	S	3401	GTCAGTGTTGTACTGGTCAGGATGTGGGACACTCTTCCACTGTGCTACTC	X	+	160871655-160871704	XqF5	Mus musculus phosphatidylinositol glycan anchor biosynthesis, class A (Piga), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	AI194334; Pig-a	AI194334; Pig-a
Mus musculus	RefSeq	ILMN_197432	ILMN_256970	A430048G15RIK	XM_925399.2	XM_925399.2		381426	94366915	XM_925399.2	A430048G15Rik	XP_930492.1	ILMN_1220621	007570095	S	443	GGAACCGGGCAAGATGGTGCTGATGGACAAAGGCAGGATGTTCTCTGCGC				2qF2	PREDICTED: Mus musculus RIKEN cDNA A430048G15 gene (A430048G15Rik), mRNA.					
Mus musculus	RefSeq	ILMN_208912	ILMN_208912	PIK3AP1	NM_031376.3	NM_031376.3		83490	148747285	NM_031376.3	Pik3ap1	NP_113553.1	ILMN_2590736	004920598	S	2350	AAATCCCCGAAATTACCCGGAGTCGTGGCCCAGGTCCTACGCAGGTGGAC				19qC3	Mus musculus phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI];  [goid 5066] [evidence IDA]	BCAP; 1810044J04Rik	BCAP; 1810044J04Rik
Mus musculus	RefSeq	ILMN_196711	ILMN_196711	KLK1B21	NM_010642.1	NM_010642.1		16616	23956055	NM_010642.1	Klk1b21	NP_034772.1	ILMN_2732087	004780215	S	567	ATGGCAAATCCCAAATGATCTCCAGTGTGGGTTCATCAAGCCCCTGCCTA	7	+	51361145-51361145:51361242-51361290	7qB4	Mus musculus kallikrein 1-related peptidase b21 (Klk1b21), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	Klk21; mGk-21	Klk21; mGk-21
Mus musculus	RefSeq	ILMN_196711	ILMN_196711	KLK1B21	NM_010642.1	NM_010642.1		16616	23956055	NM_010642.1	Klk1b21	NP_034772.1	ILMN_1219551	003170240	S	760	TGGGGCTCTATCCCATGCGCTAAACCCAATGCGCCGGCCATCTACACCAA	7	+	51361804-51361853	7qB4	Mus musculus kallikrein 1-related peptidase b21 (Klk1b21), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	Klk21; mGk-21	Klk21; mGk-21
Mus musculus	RefSeq	ILMN_196711	ILMN_196711	KLK1B21	NM_010642.1	NM_010642.1		16616	23956055	NM_010642.1	Klk1b21	NP_034772.1	ILMN_2651099	006110112	S	587	TCCAGTGTGGGTTCATCAAGCCCCTGCCTAATGAAAATTGTGCCAAAGCC	7	+	51361261-51361310	7qB4	Mus musculus kallikrein 1-related peptidase b21 (Klk1b21), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IDA]	Klk21; mGk-21	Klk21; mGk-21
Mus musculus	RefSeq	ILMN_197353	ILMN_197353	LOC245068	XM_142402.2	XM_142402.2			38075305	XM_142402.2	LOC245068		ILMN_2527833	000670255	S	1321	CACATCCTGAGTATAAAGAGGAGGCTATTTGAAACACCCTGGAAAAAGAC										
Mus musculus	RefSeq	ILMN_208757	ILMN_208757	TIMM44	NM_011592.1	NM_011592.1		21856	19705562	NM_011592.1	Timm44	NP_035722.1	ILMN_2589211	001340400	S	1069	CTATCCAGCAGGCCAAGGCTCTGGGCTTCCAGTTCCACTCCCGAATTCTG	8	-	4261925-4261974	8qA1.1	Mus musculus translocase of inner mitochondrial membrane 44 (Timm44), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	Tim44; D8Ertd118e; MGC144743; Mimt44; MGC118030; 0710005E20Rik; MGC144744	Tim44; D8Ertd118e; MGC144743; Mimt44; MGC118030; 0710005E20Rik; MGC144744
Mus musculus	RefSeq	ILMN_208757	ILMN_208757	TIMM44	NM_011592.1	NM_011592.1		21856	19705562	NM_011592.1	Timm44	NP_035722.1	ILMN_2968676	006220450	S	1387	GCAGCTCGAGGCTAGACCATCATGGGACAGACACACAGAGACACTTTGCC	8	-	4260066-4260115	8qA1.1	Mus musculus translocase of inner mitochondrial membrane 44 (Timm44), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	Tim44; D8Ertd118e; MGC144743; Mimt44; MGC118030; 0710005E20Rik; MGC144744	Tim44; D8Ertd118e; MGC144743; Mimt44; MGC118030; 0710005E20Rik; MGC144744
Mus musculus	RefSeq	ILMN_208757	ILMN_208757	TIMM44	NM_011592.1	NM_011592.1		21856	19705562	NM_011592.1	Timm44	NP_035722.1	ILMN_2750428	001780440	S	1365	TGAGGGCAGCAATGGAGTCTAGGCAGCTCGAGGCTAGACCATCATGGGAC	8	-	4260088-4260135:4260136-4260137	8qA1.1	Mus musculus translocase of inner mitochondrial membrane 44 (Timm44), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	Tim44; D8Ertd118e; MGC144743; Mimt44; MGC118030; 0710005E20Rik; MGC144744	Tim44; D8Ertd118e; MGC144743; Mimt44; MGC118030; 0710005E20Rik; MGC144744
Mus musculus	Riken	ILMN_205854	ILMN_205854	ZFP276	ri|A730076O17|PX00151J21|AK043258|2225					AK043258	Zfp276		ILMN_1247135	000290082	S	1862	AGTGTGGTAGCTCTTCTGCTGACTGGCCCTTCTGTGGAGCTCAGACCCCA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	Riken	ILMN_207246	ILMN_207246	F830014K21RIK	ri|F830014K21|PL00005H05|AK089749|3305					AK089749	F830014K21Rik		ILMN_1241627	000380452	S	2839	GAGCCAAAGGCATTAGCGTCCCTGGGTGGGATGCATAGCTCAGCGTTTAG										
Mus musculus	RefSeq	ILMN_200805	ILMN_200805	LOC384585	XM_357729.1	XM_357729.1			38086262	XM_357729.1	LOC384585		ILMN_1243863	003120040	S	383	TGGGTCTGATCTGGTTGAAGGATATTGCAGGGACAACCTCTGGGACACTG										
Mus musculus	RefSeq	ILMN_211131	ILMN_211131	ACTL6A	NM_019673.1	NM_019673.1		56456	9789892	NM_019673.1	Actl6a	NP_062647.1	ILMN_1254256	002970519	S	1688	GGTTGGTGGAATTACTCTGTATTGACAAGTACAAGTTACTGCCTATGCTT	3	+	32625792-32625841	3qA3	Mus musculus actin-like 6A (Actl6a), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Actl6; C79802; Baf53a; ARP4; 2810432C06Rik; AI851094	Actl6; C79802; Baf53a; ARP4; 2810432C06Rik; AI851094
Mus musculus	MEEBO	ILMN_209139	ILMN_209139	BC024814	scl0239706.7_17				22122828	NM_146247	BC024814		ILMN_2592909	000150561	S	978	TTAACACACTTTCCCGACTGGTCCACAGACTGAAAAATGCCTGCACCGCC										
Mus musculus	Riken	ILMN_205390	ILMN_205390	SEMA3A	ri|E030004A12|PX00204B07|AK053115|2596					AK053115	Sema3a		ILMN_2572191	003310647	S	2435	GGGCTGAGATGAGGGCCATGAGTAAACCCAGATGGAGATGAAGAGCTGCA						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IDA]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IMP]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IGI]	Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal [goid 45499] [evidence IDA]		
Mus musculus	RefSeq	ILMN_210462	ILMN_210462	AI646023	NM_198860.1	NM_198860.1		192734	38524601	NM_198860.1	AI646023	NP_942560.1	ILMN_2605858	001690600	S	4320	TCTCTGGGTGAAAAGGAAAGCTCACTCGTCCTGGGAGAGGGCCTCGGATC	10	-	75013706-75013755	10qC1	Mus musculus expressed sequence AI646023 (AI646023), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC67483; MGC65625	MGC67483; MGC65625
Mus musculus	RefSeq	ILMN_218851	ILMN_257842	4930468A15RIK	XM_910434.2	XM_910434.2		74987	94407855	XM_910434.2	4930468A15Rik	XP_915527.1	ILMN_2700954	006270187	S	919	GGCCATCCTATTATTTCCTGCCTTGTGGTAGCTTCAGTAGTTCAATTGGC				XqA7.3	PREDICTED: Mus musculus RIKEN cDNA 4930468A15 gene (4930468A15Rik), mRNA.					
Mus musculus	Riken	ILMN_206070	ILMN_206070	D930005G01RIK	ri|D930005G01|PX00200F15|AK052968|4416					AK052968	D930005G01Rik		ILMN_2577326	000540414	S	3818	GGGGTAGAGCCTGAAGGTGGATTCCAGGTAGAACTTACATGAGCTCAGGC										
Mus musculus	Riken	ILMN_202791	ILMN_202791	4933426M11RIK	ri|4933426M11|PX00020M10|AK030233|2128					AK030233	4933426M11Rik		ILMN_2552322	007400646	S	17	CCTCTGCGGGGCCTCCCCCGCCCGCGTCGTACAGCTGGGCCAGTGACGCT										
Mus musculus	RefSeq	ILMN_201012	ILMN_320101	LOC100042550	XM_001477781.1	XM_001477781.1		100042550	149273350	XM_001477781.1	LOC100042550	XP_001477831.1	ILMN_1246528	007150162	S	932	TAGTTTCTACTCAGGTGAGGGATGTCCACCTCGCCAGCGCCCTGGTTTGC	Y|NT_166360.1	+	222977-223026		PREDICTED: Mus musculus similar to putative, transcript variant 1 (LOC100042550), mRNA.					
Mus musculus	Riken	ILMN_204515	ILMN_204515	B230361I03RIK	ri|B230361I03|PX00160J02|AK046250|3427					AK046250	B230361I03Rik		ILMN_1243614	006510594	S	3146	TGACAGTGACACCTATACATAGACCCGAGCAGCGCAGCCGTGCACACACG										
Mus musculus	Riken	ILMN_207093	ILMN_207093	F830035P04RIK	ri|F830035P04|PL00007I07|AK089876|2425					AK089876	F830035P04Rik		ILMN_1259358	002230246	S	2267	CTCTTTGCCTCGTGAGTGCTTCCAGGACTCTAGACCTGTCAAGTAGACTT										
Mus musculus	RefSeq	ILMN_213670	ILMN_213670	EG317677	NM_173864.2	NM_173864.2		317677	31341088	NM_173864.2	EG317677	NP_776289.1	ILMN_2929594	002710465	S	2432	GGTTCTGGTTGTATGGAGAGCCACGAAGGAGAGAGAGGGAGATTTGGGGG	6	-	124574823-124574872	6qF2	Mus musculus predicted gene, EG317677 (EG317677), mRNA.		Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C1sb	C1sb
Mus musculus	RefSeq	ILMN_213670	ILMN_213670	EG317677	NM_173864.2	NM_173864.2		317677	31341088	NM_173864.2	EG317677	NP_776289.1	ILMN_2639513	006760725	S	2603	ATGACTACCTTAATTTTTCTCTGTGAGTTGCTTCAATATGTTTCCTAGAA	6	-	124574652-124574701	6qF2	Mus musculus predicted gene, EG317677 (EG317677), mRNA.		Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C1sb	C1sb
Mus musculus	RefSeq	ILMN_213670	ILMN_213670	EG317677	NM_173864.2	NM_173864.2		317677	31341088	NM_173864.2	EG317677	NP_776289.1	ILMN_2752720	006220674	S	1468	ACGGCCGCTCACGTTGTGGAGAAAAACTCCGACCCTTCAATGTATGCCGG	6	-	124575787-124575836	6qF2	Mus musculus predicted gene, EG317677 (EG317677), mRNA.		Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C1sb	C1sb
Mus musculus	RefSeq	ILMN_213670	ILMN_213670	EG317677	NM_173864.2	NM_173864.2		317677	31341088	NM_173864.2	EG317677	NP_776289.1	ILMN_1260226	005310465	S	1515	CGGGATCACGGCTTTGAGACTGGCTGACTTGGAAAATGCCCAGAGGCTCT	6	-	124575740-124575789	6qF2	Mus musculus predicted gene, EG317677 (EG317677), mRNA.		Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C1sb	C1sb
Mus musculus	RefSeq	ILMN_200945	ILMN_200945	LOC382264	XM_358724.1	XM_358724.1			38087248	XM_358724.1	LOC382264		ILMN_1253663	004010068	S	289	GACCATGCTAGCTTCCAATGTGACAGACTGACCTGTGACTTGTGAGTGCC										
Mus musculus	RefSeq	ILMN_222941	ILMN_222941	SERPINB13	NM_172852.2	NM_172852.2		241196	142384003	NM_172852.2	Serpinb13	NP_766440.1	ILMN_1256506	002360066	S	1244	CTGAAACATTAGAGCACTAAGTAGCACTCAAGAGTTGACAGACCATGGGG	1	+	108897409-108897458	1qE2.1	Mus musculus serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 13 (Serpinb13), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	headpin; HURPIN; 5430417G24; HUR7; PI13	headpin; HURPIN; 5430417G24; HUR7; PI13
Mus musculus	RefSeq	ILMN_190827	ILMN_190827	UNC93A	NM_199252.1	NM_199252.1		381058	40445394	NM_199252.1	Unc93a	NP_954860.1	ILMN_3077758	004880687	I	1943	CCACAAAGGAAGCCGTAGCTAGGTACTAGGGTGGAGGAAGTGGCTCTGTC	17	-	13302133-13302182	17qA1	Mus musculus unc-93 homolog A (C. elegans) (Unc93a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Unc93l; unc-93A	Unc93l; unc-93A
Mus musculus	RefSeq	ILMN_190827	ILMN_190827	UNC93A	NM_199252.1	NM_199252.1		381058	40445394	NM_199252.1	Unc93a	NP_954860.1	ILMN_2473612	001500014	S	10	CTGCCACTGTACAGTGGGTTTCAACAAGAGTTCCTCTCTGGAGAGTACAC	17	-	13324598-13324647	17qA1	Mus musculus unc-93 homolog A (C. elegans) (Unc93a), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Unc93l; unc-93A	Unc93l; unc-93A
Mus musculus	RefSeq	ILMN_238051	ILMN_238051	LHX9	NM_001025565.2	NM_001025565.2		16876	118131184	NM_001025565.2	Lhx9	NP_001020736.1	ILMN_3160067	003940685	A	1226	GACCGGGACCAGCAGCCTTATCCACCTTCACAGAAGACCAAACGGATGCG	1	-	140729402-140729451	1qF	Mus musculus LIM homeobox protein 9 (Lhx9), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The process by which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals [goid 35262] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	LH2B; BB104635	LH2B; BB104635
Mus musculus	RefSeq	ILMN_219792	ILMN_238051	LHX9	NM_001025565.2	NM_001025565.2		16876	118131184	NM_001025565.2	Lhx9	NP_001020736.1	ILMN_1245843	004040630	S	1329	ACCATAACCCAGATGCCAAGGACCTCAAACAGCTTGCTCAAAAAACAGGC	1	-	140729299-140729348	1qF	Mus musculus LIM homeobox protein 9 (Lhx9), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The process by which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals [goid 35262] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	LH2B; BB104635	LH2B; BB104635
Mus musculus	RefSeq	ILMN_211822	ILMN_211822	2310039H08RIK	NM_025966.3	NM_025966.3		67101	124286871	NM_025966.3	2310039H08Rik	NP_080242.1	ILMN_2619836	002340598	S	699	GGACAGCACAACCTCCTGGACCCGCTTGTTCTGATGATACCGATAAACCG	17	+	46910282-46910331	17qC	Mus musculus RIKEN cDNA 2310039H08 gene (2310039H08Rik), mRNA.					
Mus musculus	MEEBO	ILMN_193158	ILMN_193158	SCL0003993.1_28	scl0003993.1_28						scl0003993.1_28		ILMN_2494587	006900709	S	2	TCCCAGCTTGTACAGAAGACCAGTACACCCAGCCCTGAGGGACTGAGCGA										
Mus musculus	Riken	ILMN_204171	ILMN_204171	HPS3	ri|A130052P17|PX00124I02|AK037829|2928					AK037829	Hps3		ILMN_1228795	004480452	S	1425	CCCATGTGTCCTTAGTATTCAGCATGGAGGCTATTGTGGCTGAGGGGCCT						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IMP]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IMP]			
Mus musculus	RefSeq	ILMN_232107	ILMN_232107	EG546896	NM_001081301.1	NM_001081301.1		546896	124486824	NM_001081301.1	EG546896	NP_001074770.1	ILMN_2948405	006960543	S	241	CTAGCTGACCTGAGCATGCCTGGCCATGGCAGGGGCAGTCCCATCTCATT	6	-	42488726-42488775	6qB2.1	Mus musculus predicted gene, EG546896 (EG546896), mRNA.					
Mus musculus	RefSeq	ILMN_199069	ILMN_199069	EG237433	XM_137275.3	XM_137275.3		237433	94388527	XM_137275.3	EG237433	XP_137275.1	ILMN_1255242	002340195	S	667	TGATCGAAAGGGGAAACCTCGGAAAGTGATAGGTTGCAGCTGTGTGGTGG	10	-	88193130-88193179	10qC1	PREDICTED: Mus musculus predicted gene, EG237433 (EG237433), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_218529	ILMN_218529	PPM1F	NM_176833.2	NM_176833.2		68606	31341186	NM_176833.2	Ppm1f	NP_789803.1	ILMN_2729496	006450594	S	969	TGAAGCCCTGGGTGGCTTTGTTTCTCTCATGGACTGTTGGAGAGTCAACG	16	+	16836044-16836093	16qA3	Mus musculus protein phosphatase 1F (PP2C domain containing) (Ppm1f), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]	4933427B07Rik; CaMKPase; 1110021B16Rik; mKIAA0015; MGC25978	4933427B07Rik; CaMKPase; 1110021B16Rik; mKIAA0015; MGC25978
Mus musculus	RefSeq	ILMN_218529	ILMN_218529	PPM1F	NM_176833.2	NM_176833.2		68606	31341186	NM_176833.2	Ppm1f	NP_789803.1	ILMN_2792756	005890113	S	4604	ACATGCCATGTGGGCCTTGCCAAGGGTTATTTCAGGGGTCTTCCTGGGAG	16	+	16840762-16840811	16qA3	Mus musculus protein phosphatase 1F (PP2C domain containing) (Ppm1f), mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]	4933427B07Rik; CaMKPase; 1110021B16Rik; mKIAA0015; MGC25978	4933427B07Rik; CaMKPase; 1110021B16Rik; mKIAA0015; MGC25978
Mus musculus	Riken	ILMN_206815	ILMN_206815	D930015A08RIK	ri|D930015A08|PX00201N16|AK086226|2018					AK086226	D930015A08Rik		ILMN_2582890	000290553	S	1566	TCCAGGATGCATTTCCCACACCAGCATGTGCTTTCTACGAGGACTCCTGC										
Mus musculus	RefSeq	ILMN_221661	ILMN_317977	LOC100045448	XR_031636.1	XR_031636.1		100045448	149249398	XR_031636.1	LOC100045448		ILMN_2776734	004220021	S	42	CCTATATGCTTGGTGTTTCTGATATGATTTGATATGTTCATGTATCCCTG					PREDICTED: Mus musculus similar to axotrophin (LOC100045448), misc RNA.					
Mus musculus	Riken	ILMN_206474	ILMN_206474	NFATC3	ri|D430001G08|PX00193H13|AK084848|2722					AK084848	Nfatc3		ILMN_1252089	006370064	S	2585	GGCAGGTGCTTGCCTGTGAGTTGAAGGAGGCCAGTCTAGTCTTGATAGTG						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IGI]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]		
Mus musculus	RefSeq	ILMN_199363	ILMN_199363	OBOX1	NM_027802.2	NM_027802.2		71468	118130390	NM_027802.2	Obox1	NP_082078.1	ILMN_1239356	006860010	S	953	CCTTGAAGACTTTTGACACATCAGATGACTGGCTTGCCATGAGAAACCCC	7	+	16141931-16141980	7qA2	Mus musculus oocyte specific homeobox 1 (Obox1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AU024152; AU015708; 7420700M11Rik	AU024152; AU015708; 7420700M11Rik
Mus musculus	RefSeq	ILMN_204728	ILMN_227464	1810043G02RIK	NM_026431.2	NM_026431.2		67884	133778944	NM_026431.2	1810043G02Rik	NP_080707.2	ILMN_1247153	007570091	S	1480	CTTGGGGCCTTTCCTGGCTCGTTCTCTTATGGCAGGTGTAAGGTCACCCC	10	+	77442837-77442886	10qC1	Mus musculus RIKEN cDNA 1810043G02 gene (1810043G02Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D10Jhu13e; AV026620	D10Jhu13e; AV026620
Mus musculus	RefSeq	ILMN_188089	ILMN_227464	1810043G02RIK	NM_026431.2	NM_026431.2		67884	133778944	NM_026431.2	1810043G02Rik	NP_080707.2	ILMN_2449725	001850368	S	1123	GCCGCTAGGGGGAGCCCTAGTATCACTGTATCAAGCCTACCCTTGGAGAT	10	+	77442480-77442529	10qC1	Mus musculus RIKEN cDNA 1810043G02 gene (1810043G02Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D10Jhu13e; AV026620	D10Jhu13e; AV026620
Mus musculus	RefSeq	ILMN_188089	ILMN_227464	1810043G02RIK	NM_026431.2	NM_026431.2		67884	133778944	NM_026431.2	1810043G02Rik	NP_080707.2	ILMN_2706652	004810121	S	680	ATCCTGACTGCCATATTGCTACTGCTGCGGGAGCTGGATACGGAGGGGCT	10	+	77441398-77441447	10qC1	Mus musculus RIKEN cDNA 1810043G02 gene (1810043G02Rik), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D10Jhu13e; AV026620	D10Jhu13e; AV026620
Mus musculus	RefSeq	ILMN_190791	ILMN_261003	GMEB1	NM_020273.1	NM_020273.1		56809	9937989	NM_020273.1	Gmeb1	NP_064669.1	ILMN_2693230	007160468	S	2253	AAGTAGTGTGATCAGCAGCTCATAGGGGGAGCCCTTTGACAGGGAGGGGC	4	-	131781116-131781165	4qD2.3	Mus musculus glucocorticoid modulatory element binding protein 1 (Gmeb1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AI481278; AI256615; 1110050A04Rik	AI481278; AI256615; 1110050A04Rik
Mus musculus	RefSeq	ILMN_212260	ILMN_310624	FPR-RS7	XR_035358.1	XR_035358.1		321021	149268595	XR_035358.1	Fpr-rs7		ILMN_1241143	007560441	S	486	CTTCTTGACTACAGTGAAAGATGAAAGTGGTAAAGTACACTGTATATGCA	17	-	20250655-20250704	17qA3.2	PREDICTED: Mus musculus formyl peptide receptor, related sequence 7 (Fpr-rs7), misc RNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_221178	ILMN_221178	KLF6	NM_011803.2	NM_011803.2		23849	84794648	NM_011803.2	Klf6	NP_035933.2	ILMN_2731949	003290491	S	1537	CCAAGGGATGAGTTGACCACCAATCATTTCCTGAAGGGTGTCTGCACCTT	13	+	5866959-5867008	13qA1	Mus musculus Kruppel-like factor 6 (Klf6), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	Ierepo3; CPBP; BCD1; Zf9; Ierepo1; FM2; AI448727; Copeb; FM6; C86813; R75280	Ierepo3; CPBP; BCD1; Zf9; Ierepo1; FM2; AI448727; Copeb; FM6; C86813; R75280
Mus musculus	RefSeq	ILMN_221178	ILMN_221178	KLF6	NM_011803.2	NM_011803.2		23849	84794648	NM_011803.2	Klf6	NP_035933.2	ILMN_1232041	006960196	S	870	TGGCTGCAGGAAAGTTTACACGAAAAGCTCCCACTTGAAAGCACATCAGC	13	+	5864529-5864578	13qA1	Mus musculus Kruppel-like factor 6 (Klf6), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]	Ierepo3; CPBP; BCD1; Zf9; Ierepo1; FM2; AI448727; Copeb; FM6; C86813; R75280	Ierepo3; CPBP; BCD1; Zf9; Ierepo1; FM2; AI448727; Copeb; FM6; C86813; R75280
Mus musculus	RefSeq	ILMN_219589	ILMN_219589	OLFR1462	NM_146693.1	NM_146693.1		258688	33239141	NM_146693.1	Olfr1462	NP_666904.1	ILMN_2710887	006420521	S	548	TGATAATATCTCGCTCTGACAAATATATTAATGAACTGGTTCTTATTTCT	19	+	13265706-13265755	19qA	Mus musculus olfactory receptor 1462 (Olfr1462), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR202-13; MGC157634	MOR202-13; MGC157634
Mus musculus	RefSeq	ILMN_226802	ILMN_226802	D13ERTD608E	NM_001033130.1	NM_001033130.1		52673	85701639	NM_001033130.1	D13Ertd608e	NP_001028302.1	ILMN_2915951	001030431	S	554	TTCTCTTGCTAAGCTTGCTCAGGGAGAAAGGGCTGGAACTTGAGACCTGC					Mus musculus DNA segment, Chr 13, ERATO Doi 608, expressed (D13Ertd608e), mRNA.				AU016312; AU015195	AU016312; AU015195
Mus musculus	RefSeq	ILMN_197383	ILMN_226802	D13ERTD608E	NM_001033130.1	NM_001033130.1		52673	85701639	NM_001033130.1	D13Ertd608e	NP_001028302.1	ILMN_2527947	001300669	S	263	CATCAGATTCTGCAGACTATGAGCTACTGAGTGCACAAGTATTGCCATCC					Mus musculus DNA segment, Chr 13, ERATO Doi 608, expressed (D13Ertd608e), mRNA.				AU016312; AU015195	AU016312; AU015195
Mus musculus	RefSeq	ILMN_197426	ILMN_244543	DUPD1	NM_001013826.2	NM_001013826.2		435391	141802095	NM_001013826.2	Dupd1	NP_001013848.1	ILMN_2528095	002600228	S	610	GCCATTCAACAAGTGGCTAAGAACCGCTGTGTCCTGCCCAACCGGGGCTT	14	-	22496237-22496286	14qA3	Mus musculus dual specificity phosphatase and pro isomerase domain containing 1 (Dupd1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]	EG435391	EG435391
Mus musculus	RefSeq	ILMN_194679	ILMN_226826	OLFM1	NM_001038614.1	NM_001038614.1		56177	84370358	NM_001038614.1	Olfm1	NP_001033703.1	ILMN_1241371	006180129	S	720	GCAGTCCCCCATGTAACCATGAGAGAGCCAGAGAGCTTTTTGCACCATGC	2	+	28069664-28069713	2qA3	Mus musculus olfactomedin 1 (Olfm1), transcript variant 4, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Pancortin3; Noe1; AW742568; Pancortin; AMY; OlfA	Pancortin3; Noe1; AW742568; Pancortin; AMY; OlfA
Mus musculus	Riken	ILMN_202632	ILMN_202632	5730588I11RIK	ri|5730588I11|PX00093A18|AK019977|1070					AK019977	5730588I11Rik		ILMN_1230786	005900075	S	2	AAAGGAACAGTTCCGGCACGTGTGTTGGCTGCAGCGGATGCGGTGCCCGG										
Mus musculus	RefSeq	ILMN_209690	ILMN_209690	ASB17	NM_025758.4	NM_025758.4		66772	146149080	NM_025758.4	Asb17	NP_080034.2	ILMN_2598271	005340112	S	675	GACCACGAGTTGATTGACATTCAAGAAGATGCCAAGACATGTTTAATGCT				3qH3	Mus musculus ankyrin repeat and SOCS box-containing 17 (Asb17), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		4933436O18Rik	4933436O18Rik
Mus musculus	RefSeq	ILMN_217011	ILMN_217011	ESM1	NM_023612.3	NM_023612.3		71690	34328304	NM_023612.3	Esm1	NP_076101.1	ILMN_1257574	003420451	S	1987	GAGTTGTGAATGTACTCGTGGGAAGATCCGTGAATGTAAGCGCAACCGGC	13	+	114008196-114008245	13qD2.2	Mus musculus endothelial cell-specific molecule 1 (Esm1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	ESM-1; AV004503; 0610042H23Rik	ESM-1; AV004503; 0610042H23Rik
Mus musculus	RefSeq	ILMN_210285	ILMN_210285	HLTF	NM_144959.2	NM_144959.2		20585	67763821	NM_144959.2	Hltf	NP_659208.2	ILMN_2604086	004850070	S	2733	CCATTTCTGCTTTTAGTCTTTCATGTTCTTTTAGTTGTACCAGCTTCTGT	3	+	20008199-20008248	3qA2	Mus musculus helicase-like transcription factor (Hltf), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	Snf2l3; Smarca3; P113; BC057116; AF010600	Snf2l3; Smarca3; P113; BC057116; AF010600
Mus musculus	RefSeq	ILMN_207498	ILMN_207498	0610011B16RIK	XM_148460.1	XM_148460.1			20891600	XM_148460.1	0610011B16Rik		ILMN_1260494	005270551	I	1	AGGCAGGCCGCAGGAGCTTCCGATTGGTTGTCATCAATAAGGGCGTGGCA										
Mus musculus	RefSeq	ILMN_200526	ILMN_200526	LOC383293	XM_356969.1	XM_356969.1			38083247	XM_356969.1	LOC383293		ILMN_2539068	004590762	S	754	GCACTCCTGTCTTCAGCTTCAGTCTTGTTGATGATCGAGCTTGGTCTAGA										
Mus musculus	RefSeq	ILMN_201575	ILMN_201575	TERA-PENDING	XM_125257.1	XM_125257.1			20952776	XM_125257.1	Tera-pending		ILMN_2542956	003800242	S	61	TGCAGGAGGTTGGCCTGGTGCAGTTTGCACCGTGGGGACGCTGCTGCGCG										
Mus musculus	RefSeq	ILMN_225742	ILMN_225742	OLFR433	NM_146717.1	NM_146717.1		258712	22129402	NM_146717.1	Olfr433	NP_666928.1	ILMN_2862009	001240309	S	874	CGCAACAAAGAGGTGAAGGAAGCCGTGAAGAGGGTCAGTGAAAAGATCAG	1|NT_039195.1	-	175972104-175972153	1qH3	Mus musculus olfactory receptor 433 (Olfr433), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR123-1	MOR123-1
Mus musculus	RefSeq	ILMN_201560	ILMN_201560	TCF20	NM_013836.2	NM_013836.2		21411	37620160	NM_013836.2	Tcf20	NP_038864.2	ILMN_2627638	005220037	S	4829	GATTTCACCCAAACAAGAAAGTTTCCCCCCTAAAGGGTATTTCCCATCAG	15	-	82682985-82683034	15qE1	Mus musculus transcription factor 20 (Tcf20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810438H08Rik; mKIAA0292; SPBP	2810438H08Rik; mKIAA0292; SPBP
Mus musculus	RefSeq	ILMN_201560	ILMN_201560	TCF20	NM_013836.2	NM_013836.2		21411	37620160	NM_013836.2	Tcf20	NP_038864.2	ILMN_2763781	004230711	S	6084	GAAGGTGGAGGACACACGTGACGGAATGGAATCCTCCTGCTGTGCAACCA	15	-	82640149-82640198	15qE1	Mus musculus transcription factor 20 (Tcf20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810438H08Rik; mKIAA0292; SPBP	2810438H08Rik; mKIAA0292; SPBP
Mus musculus	RefSeq	ILMN_201560	ILMN_201560	TCF20	NM_013836.2	NM_013836.2		21411	37620160	NM_013836.2	Tcf20	NP_038864.2	ILMN_2659528	004570500	S	4778	GGCCCCTGAGGCAAATCCCAAGGCTGAAGAGAAAGAGAACGATACAGTCA	15	-	82683036-82683085	15qE1	Mus musculus transcription factor 20 (Tcf20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810438H08Rik; mKIAA0292; SPBP	2810438H08Rik; mKIAA0292; SPBP
Mus musculus	RefSeq	ILMN_201560	ILMN_201560	TCF20	NM_013836.2	NM_013836.2		21411	37620160	NM_013836.2	Tcf20	NP_038864.2	ILMN_2815313	006400332	S	6058	AGCACAAGGTGAGACTGTGGAGATGAGAAGGTGGAGGACACACGTGACGG	15	-	82640175-82640199:82640200-82640217:82646041-82646047	15qE1	Mus musculus transcription factor 20 (Tcf20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810438H08Rik; mKIAA0292; SPBP	2810438H08Rik; mKIAA0292; SPBP
Mus musculus	RefSeq	ILMN_201560	ILMN_201560	TCF20	NM_013836.2	NM_013836.2		21411	37620160	NM_013836.2	Tcf20	NP_038864.2	ILMN_2635437	007330630	S	6052	GCCCCAAGCACAAGGTGAGACTGTGGAGATGAGAAGGTGGAGGACACACG	15	-	82640181-82640199:82640200-82640217:82646041-82646053	15qE1	Mus musculus transcription factor 20 (Tcf20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2810438H08Rik; mKIAA0292; SPBP	2810438H08Rik; mKIAA0292; SPBP
Mus musculus	MEEBO	ILMN_195468	ILMN_195468	2210410E06RIK	scl30406.1.1_4						2210410E06Rik		ILMN_2515830	006110138	S	20	GGAAAAGCGGCGTCCGGGCTAAATGTACTTAGTTCATCTCCCTTACCTCT										
Mus musculus	Riken	ILMN_203862	ILMN_203862	TRRP2	ri|A530098A22|PX00144I19|AK041300|2299					AK041300	Trrp2		ILMN_1230051	004050450	S	2106	GATAGTTGGACCACAGTGTCTCCCCTGGAGCTGTGGTAGTTCAATTCTGC										
Mus musculus	MEEBO	ILMN_185592	ILMN_185592	UGT2A1	scl26414.9_223				16716476	NM_053184	Ugt2a1		ILMN_2434327	007100754	S	4	AGCAGTGGGATTCCTATTATACTAAAGCTTTAGGAAGACCCACCACACTG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence ISA]		
Mus musculus	MEEBO	ILMN_213415	ILMN_213415	4932431P20RIK	scl00114675.1_35				51744714	XM_488011	4932431P20Rik		ILMN_2636841	000380709	S	5250	AGGAGGAGGCTGGCCATGCATGAGGTAGATCTAATGAAGAAGAGAGTGTC										
Mus musculus	MEEBO	ILMN_184586	ILMN_184586	SCL0003439.1_26	scl0003439.1_26	AK036673.1			26331597	AK036673.1	scl0003439.1_26		ILMN_2419879	004220039	S	13	CATAGCTAAAGCACGCCAGACCTTTGACCGAGATGGGTCTGAAGCAGGGC										
Mus musculus	RefSeq	ILMN_218015	ILMN_218015	GANAB	NM_008060.1	NM_008060.1		14376	6679890	NM_008060.1	Ganab	NP_032086.1	ILMN_1225535	005820187	S	2347	TATCGGATGCTGGGGCCCACGGAGTGCAGGTCTATTTGCCTGGCCAAGAA	19	+	8989056-8989105	19qA	Mus musculus alpha glucosidase 2 alpha neutral subunit (Ganab), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A heterodimeric complex that catalyzes the trimming of glucose residues from N-linked core glycans on newly synthesized glycoproteins [goid 17177] [evidence IPI]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [evidence TAS]	Catalysis of the reaction: hydrolysis of terminal 1,3-alpha-D-glucosidic links in 1,3-alpha-D-glucans [goid 33919] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of glucosyl compounds, substances containing a group derived from a cyclic form of glucose or a glucose derivative [goid 15926] [evidence ISA]	GluII; G2an; MGC144012; MGC144011; AU042638; mKIAA0088	GluII; G2an; MGC144012; MGC144011; AU042638; mKIAA0088
Mus musculus	RefSeq	ILMN_218015	ILMN_218015	GANAB	NM_008060.1	NM_008060.1		14376	6679890	NM_008060.1	Ganab	NP_032086.1	ILMN_1237089	003400692	S	3569	GCCCCTCTGGTCCCCTTGGGACACTCAAGATAGAGACATGAGTTGTGGTT	19	+	8990881-8990930	19qA	Mus musculus alpha glucosidase 2 alpha neutral subunit (Ganab), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A heterodimeric complex that catalyzes the trimming of glucose residues from N-linked core glycans on newly synthesized glycoproteins [goid 17177] [evidence IPI]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [evidence TAS]	Catalysis of the reaction: hydrolysis of terminal 1,3-alpha-D-glucosidic links in 1,3-alpha-D-glucans [goid 33919] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of glucosyl compounds, substances containing a group derived from a cyclic form of glucose or a glucose derivative [goid 15926] [evidence ISA]	GluII; G2an; MGC144012; MGC144011; AU042638; mKIAA0088	GluII; G2an; MGC144012; MGC144011; AU042638; mKIAA0088
Mus musculus	RefSeq	ILMN_218015	ILMN_218015	GANAB	NM_008060.1	NM_008060.1		14376	6679890	NM_008060.1	Ganab	NP_032086.1	ILMN_2940440	006590523	S	3507	CTCCCATCTTAGAGGGAGACGCTTCCACACAATTAGGAGGGCAAGGTTAT	19	+	8990819-8990868	19qA	Mus musculus alpha glucosidase 2 alpha neutral subunit (Ganab), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A heterodimeric complex that catalyzes the trimming of glucose residues from N-linked core glycans on newly synthesized glycoproteins [goid 17177] [evidence IPI]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [evidence TAS]	Catalysis of the reaction: hydrolysis of terminal 1,3-alpha-D-glucosidic links in 1,3-alpha-D-glucans [goid 33919] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the hydrolysis of glucosyl compounds, substances containing a group derived from a cyclic form of glucose or a glucose derivative [goid 15926] [evidence ISA]	GluII; G2an; MGC144012; MGC144011; AU042638; mKIAA0088	GluII; G2an; MGC144012; MGC144011; AU042638; mKIAA0088
Mus musculus	MEEBO	ILMN_212840	ILMN_212840	E130307A14RIK	scl00327744.1_262	XM_282906.1			28495329	XM_282906.1	E130307A14Rik		ILMN_2630913	004210021	S	2538	TTGCCTCCCTCGTGGGAAATACTGGGAGGAAGTCAGTAGAAAGCTGGAGG										
Mus musculus	MEEBO	ILMN_212840	ILMN_212840	E130307A14RIK	scl00327744.1_262	XM_282906.1			28495329	XM_282906.1	E130307A14Rik		ILMN_2630910	002970674	S	2540	GCCTCCCTCGTGGGAAATACTGGGAGGAAGTCAGTAGAAAGCTGGAGGCT										
Mus musculus	MEEBO	ILMN_189445	ILMN_189445	AU020206	scl0101757.2_64						AU020206		ILMN_2461320	001740609	S	12	CTCTATTGTAGACCACCTTCCTGAAAGGCCGGGGGCTGCCATCTATGGGA										
Mus musculus	RefSeq	ILMN_199756	ILMN_315159	LOC640196	XM_001478240.1	XM_001478240.1		640196	149265566	XM_001478240.1	LOC640196	XP_001478290.1	ILMN_1218293	007100035	S	3	GAAAAAGCGCCTGAGTGCCTGCTGGGTGGTCTTGTGGCTGCATTATCAGT	14	+	53444034-53444083	14qC2	PREDICTED: Mus musculus similar to T-cell receptor alpha-chain precursor VJC (LOC640196), mRNA.					
Mus musculus	RefSeq	ILMN_208711	ILMN_208711	JAG1	NM_013822.4	NM_013822.4		16449	146134345	NM_013822.4	Jag1	NP_038850.1	ILMN_1257077	004590092	S	5029	GAACCGTAAAATGTCCAGTTAGATCACTGTTTAGATTTGCCGTAGAGTAC				2qF3	Mus musculus jagged 1 (Jag1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway [goid 45747] [evidence IDA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IMP]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of myeloid cell differentiation [goid 45639] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Ozz; Serrate-1; Htu; Ser-1; Headturner; slalom	Ozz; Serrate-1; Htu; Ser-1; Headturner; slalom
Mus musculus	MEEBO	ILMN_218622	ILMN_218622	D15MIT260	scl47753.2_110	XM_354923.1			38077846	XM_354923.1	D15Mit260		ILMN_1245164	002900192	S	2390	GGCCGAGTCTGACAGTAAGAAGAAAGGCAAGTTCAAGACCATAAAGGTGC										
Mus musculus	MEEBO	ILMN_218622	ILMN_218622	D15MIT260	scl47753.2_110	XM_354923.1			38077846	XM_354923.1	D15Mit260		ILMN_2698206	002710521	S	927	TTAACTCCCCCAACGCCAAGGCCTCGGTCTAGCCTGCAGCAAGATGGCAC										
Mus musculus	RefSeq	ILMN_211930	ILMN_211930	HRH1	NM_008285.2	NM_008285.2		15465	31542962	NM_008285.2	Hrh1	NP_032311.2	ILMN_2851300	000460338	S	3362	AAGACATTGGGCTGGGGTGATGGCTTGGTGGTTAAGCGCATTGCTTAATC	6	+	114448471-114448520	6qE3	Mus musculus histamine receptor H 1 (Hrh1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with histamine to initiate a change in cell activity. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans [goid 4969] [evidence IEA]	Bphs	Bphs
Mus musculus	RefSeq	ILMN_223270	ILMN_223270	MFSD9	NM_172499.1	NM_172499.1		211798	27369687	NM_172499.1	Mfsd9	NP_766087.1	ILMN_2825848	000290725	S	3012	CCCAGCATATTCCTGCTGAGGGTCACTTTGAGGAGCGTGTAGGAGATTTG	1	-	40716676-40716725	1qB	Mus musculus major facilitator superfamily domain containing 9 (Mfsd9), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]	4931419K03Rik	4931419K03Rik
Mus musculus	RefSeq	ILMN_217516	ILMN_217516	CCDC134	NM_172428.2	NM_172428.2		76457	116268088	NM_172428.2	Ccdc134	NP_766016.2	ILMN_1226712	001740139	S	1857	CCAAAATGTATCGCTTATAGGAGTGGAGACACCCCAGCCCGACCTCTACC	15	+	81972444-81972493	15qE1	Mus musculus coiled-coil domain containing 134 (Ccdc134), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			2310042L06Rik; AW208859	2310042L06Rik; AW208859
Mus musculus	MEEBO	ILMN_190267	ILMN_190267	MJ-1000-77_495	MJ-1000-77_495						MJ-1000-77_495		ILMN_2468635	005560047	S	6	CCTCCAGGTGTTGGAGAGTTAAAGGCTGGAGATGTTGTGGAGTGTGAGAT										
Mus musculus	RefSeq	ILMN_222738	ILMN_222738	HIST1H2BB	NM_175664.2	NM_175664.2		319178	126506291	NM_175664.2	Hist1h2bb	NP_783595.1	ILMN_2754092	001410195	S	81	CTGCACCAGCCCCTAAGAAGGGATCTAAGAAAGCCATCTCTAAGGCGCAG	13	+	23838683-23838732	13qA3.1	Mus musculus histone cluster 1, H2bb (Hist1h2bb), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2b-143	H2b-143
Mus musculus	RefSeq	ILMN_209854	ILMN_209854	OLFR346	NM_146938.1	NM_146938.1		258940	22129032	NM_146938.1	Olfr346	NP_667149.1	ILMN_2599838	001510253	S	777	TTGTGTCCCCTCATCTAACAACACTAATGACAAGGATGCCATTGTGGCTA	2	+	36544300-36544349	2qB	Mus musculus olfactory receptor 346 (Olfr346), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR136-11	MOR136-11
Mus musculus	RefSeq	ILMN_211259	ILMN_211259	MAP3K2	NM_011946.2	NM_011946.2		26405	89257353	NM_011946.2	Map3k2	NP_036076.2	ILMN_2614072	003190112	S	2076	CAGGAATGAAGTCTGTCACAGGCACGCCATACTGGATGAGTCCTGAGGTC	18	+	32386297-32386346	18qB1	Mus musculus mitogen activated protein kinase kinase kinase 2 (Map3k2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISA]	9630061B06Rik; Mekk2b; Mekk2	9630061B06Rik; Mekk2b; Mekk2
Mus musculus	Riken	ILMN_202545	ILMN_202545	2410170E21RIK	ri|2410170E21|ZX00082O17|AK010828|1571					AK010828	2410170E21Rik		ILMN_1227684	007040093	S	825	TAGAGGGACATTGTCCTAGGTGAGTCCTAGTCCTCTTCCCAGCCTGGGGA										
Mus musculus	Riken	ILMN_201777	ILMN_201777	2210015D19RIK	ri|2210015D19|ZX00053L01|AK008730|981					AK008730	2210015D19Rik		ILMN_2544510	007100133	S	831	TCTGGAACAGAGATTGAGTACGGTAGGGCGTGCGTGTGGGACGAGCCACC										
Mus musculus	RefSeq	ILMN_233160	ILMN_233160	UGT3A1	NM_207216.1	NM_207216.1		105887	46402180	NM_207216.1	Ugt3a1	NP_997099.1	ILMN_2918732	007610747	S	1776	ACAGATGCACCTGAATTGGTACCTCACACTTTTGGCTCCTTTGCTCCTTG	15	+	9244352-9244401	15qA1	Mus musculus UDP glycosyltransferases 3 family, polypeptide A1 (Ugt3a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	AI746432	AI746432
Mus musculus	RefSeq	ILMN_223632	ILMN_233160	UGT3A1	NM_207216.1	NM_207216.1		105887	46402180	NM_207216.1	Ugt3a1	NP_997099.1	ILMN_2766826	001820711	S	1993	TTTGTGCATTTTTTCTCTTGTTCTTCTTCTCTTTTACAATAAACACTCTT	15	+	9244569-9244618	15qA1	Mus musculus UDP glycosyltransferases 3 family, polypeptide A1 (Ugt3a1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	AI746432	AI746432
Mus musculus	RefSeq	ILMN_200549	ILMN_200549	LOC383330	XM_356987.1	XM_356987.1			38083607	XM_356987.1	LOC383330		ILMN_2539149	004200048	S	310	TCCCCATTATATGCAACCCTGGGTGTGATCACCAAAGGTACAGTTATTGC										
Mus musculus	RefSeq	ILMN_191405	ILMN_191405	ZFP13	NM_011747.1	NM_011747.1		22654	27777686	NM_011747.1	Zfp13	NP_035877.1	ILMN_2877740	000150010	S	2015	GTCTTAGCCAGTGGGATGATGGAGTGGGGTGAGGACTGGGAGGTGGCACA	17	-	23303548-23303597	17qA3.3	Mus musculus zinc finger protein 13 (Zfp13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	AI835008; Zfp-13; Krox-8; 4933429B21	AI835008; Zfp-13; Krox-8; 4933429B21
Mus musculus	Riken	ILMN_202564	ILMN_202564	FIBP	ri|2010004G08|ZX00053I18|AK008093|1923					AK008093	Fibp		ILMN_2550570	001990180	S	1844	GCTGGGACATGAGGATTGCCGCTGTTTTCCAGGCCAGCTTGAGCCACACT						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with fibroblast growth factor [goid 17134] [evidence IEA]		
Mus musculus	RefSeq	ILMN_185666	ILMN_248360	DNALC1	NM_028821.2	NM_028821.2		105000	142371894	NM_028821.2	Dnalc1	NP_083097.1	ILMN_1223359	001740228	S	233	GAAATCAAGCTGTATGCCCAGATTCCCCCCATAGAGAAGATGGACGCATC	12	+	85465461-85465499:85465500-85465510	12qD1	Mus musculus dynein, axonemal, light chain 1 (Dnalc1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC159095; E330027P08Rik; Dnal1; MGC159097; 1700010H15Rik; AW121714	MGC159095; E330027P08Rik; Dnal1; MGC159097; 1700010H15Rik; AW121714
Mus musculus	RefSeq	ILMN_239832	ILMN_239832	A130038H09RIK	NM_001033978.1	NM_001033978.1		381091	85702170	NM_001033978.1	A130038H09Rik	NP_001029150.1	ILMN_2957543	003440204	S	1608	GAGCTTAGAGTGATGTTAGATGTGTCTGACACCAAATTGGTAGCTTCACC	17	+	33947219-33947268	17qB1	Mus musculus RIKEN cDNA A130038H09 gene (A130038H09Rik), mRNA.				Iebeta2	Iebeta2
Mus musculus	RefSeq	ILMN_215050	ILMN_250512	ZFP273	NM_198322.2	NM_198322.2		212569	141802315	NM_198322.2	Zfp273	NP_938081.1	ILMN_1232296	007400600	S	1994	GCAACAAATACTGCTTATAACCGGCAGGAAAATGTTTGGCCTGATATAAG	13	+	67927653-67927702	13qB3	Mus musculus zinc finger protein 273 (Zfp273), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Rslcan1; 6820416H06Rik	Rslcan1; 6820416H06Rik
Mus musculus	RefSeq	ILMN_224198	ILMN_262049	KDELR1	NM_133950.2	NM_133950.2		68137	118129902	NM_133950.2	Kdelr1	NP_598711.1	ILMN_2776458	001400427	S	1467	TTTGTACAGAATTTGATGGCTGATTCTTTGTTCTCTTGAAATAAACCAAG	7	+	53139038-53139087	7qB4	Mus musculus KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 (Kdelr1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The retention in the endoplasmic reticulum (ER) lumen of soluble resident proteins. Sorting receptors retrieve proteins with ER localization signals, such as KDEL and HDEL sequences or some transmembrane domains, that have escaped to the cis-Golgi network and return them to the ER. Abnormally folded proteins and unassembled subunits are also selectively retained in the ER [goid 6621] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an endoplasmic reticulum (ER) retention sequence, a specific peptide sequence that ensures a protein is retained within the ER [goid 46923] [evidence IEA]	AW215843; 8030486F04Rik; Erd2.1	AW215843; 8030486F04Rik; Erd2.1
Mus musculus	RefSeq	ILMN_198333	ILMN_198333	LOC209371	XM_145251.3	XM_145251.3			38083977	XM_145251.3	LOC209371		ILMN_1257852	000780082	S	913	GTTGAACAGAGGGCCCAGGAAATACCAACCAGTCCCTCTTTGACTCTTGG										
Mus musculus	Riken	ILMN_202072	ILMN_202072	MSX3	ri|2700004C03|ZX00062J06|AK012208|1448					AK012208	Msx3		ILMN_1234996	006420477	S	807	CCCCCCCCCCTCCTCCTGTTTATACGGTGTTATACTTGATGACTGGAGCC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IGI]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of an acetyl group to a histone protein [goid 35067] [evidence IGI]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	Riken	ILMN_204238	ILMN_204238	B130003M23RIK	ri|B130003M23|PX00156B18|AK044812|1829					AK044812	B130003M23Rik		ILMN_2563442	006370161	S	1744	GAAGGGCCCCCAGTGACACAAACAGATTGTTTAGGGCAGCCTTTGGAGGC										
Mus musculus	RefSeq	ILMN_227684	ILMN_227684	OTTMUSG00000001246	NM_001013393.1	NM_001013393.1		433719	61656199	NM_001013393.1	OTTMUSG00000001246	NP_001013411.1	ILMN_2836988	002100673	S	998	ATGGCATGTCTGGATCTTCTGGACAGCTTCCTTGGAACCCATCTCTGATC	4	-	73062341-73062390	4qC3	Mus musculus predicted gene, OTTMUSG00000001246 (OTTMUSG00000001246), mRNA.					
Mus musculus	RefSeq	ILMN_198492	ILMN_198492	LOC240676	XM_140768.3	XM_140768.3			38085823	XM_140768.3	LOC240676		ILMN_1242044	002060681	S	1660	GGCAAAGTCTATTCACAATCAAGTCACCTCCAGCTACACGGAAGAACACA										
Mus musculus	Riken	ILMN_205205	ILMN_205205	D030020M24RIK	ri|D030020M24|PX00179L18|AK050805|3071					AK050805	D030020M24Rik		ILMN_1216867	005340086	S	2312	GGGCCGCCGATGGCTCAGCAGGTCAAAGCATTTTCCACACAAGCCTGATG										
Mus musculus	RefSeq	ILMN_220518	ILMN_220518	ACHE	NM_009599.3	NM_009599.3		11423	87252712	NM_009599.3	Ache	NP_033729.1	ILMN_1227999	006130326	S	2023	TTTAAGGGCTGGGATATAATACGACCGAGCCCCCAGGCCCTGTCCACTCC	5	+	137732182-137732231	5qG2	Mus musculus acetylcholinesterase (Ache), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of acetylcholine, the acetic acid ester of the organic base choline [goid 6581] [evidence IDA]; The chemical reactions and pathways resulting in the formation of neurotransmitter receptors [goid 45212] [evidence IMP]; Any process that modulates the frequency, rate, or extent of receptor recyling [goid 1919] [evidence IMP]; The process by which cell surface receptors are monoubiquitinated following ligand-induced activation, and subsequently taken up into endocytic vesicles and targeted to the lysosome or vacuole for degradation; serves as a mechanism to downregulate receptor signaling [goid 31623] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence IDA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IMP]	Catalysis of the reaction: acetylcholine + H2O = choline + acetate [goid 3990] [evidence IDA]; Interacting selectively with laminins, glycoproteins that are major constituents of the basement membrane of cells [goid 43236] [evidence IPI]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion [goid 4104] [evidence IEA]	mE1c; mE1a; mE1c-long; mE1d; mE1b; mE1d'; mE1e	mE1c; mE1a; mE1c-long; mE1d; mE1b; mE1d'; mE1e
Mus musculus	RefSeq	ILMN_222192	ILMN_258064	OSTA	NM_145932.3	NM_145932.3		106407	142351565	NM_145932.3	Osta	NP_666044.1	ILMN_2746116	000630750	S	1487	GGCTGGCAGCTTCCATGTGACTATAGGGATGAAGGTAAAGTGCAGTGGGT	16	-	32475671-32475720	16qB3	Mus musculus organic solute transporter alpha (Osta), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IPI]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IPI]	D630035O19Rik; AV001382; AW261577; OSTalpha	D630035O19Rik; AV001382; AW261577; OSTalpha
Mus musculus	MEEBO	ILMN_212480	ILMN_212480	E230001N04RIK	scl50921.1.23_223	NM_177094.2			31342790	NM_177094.2	E230001N04Rik		ILMN_2626922	001050592	S	1220	CCTGCAAGGAAGCCCTGGATGATACCAACCCCAGAAGTTGAAAAGCTACC										
Mus musculus	RefSeq	ILMN_200662	ILMN_200662	LOC381799	XM_355801.1	XM_355801.1			38084973	XM_355801.1	LOC381799		ILMN_2539557	002850041	S	235	ATGGTCAGTAGAACAGAGGGTGCCATCGATGACTCGCTCATCGGTGGAAA										
Mus musculus	RefSeq	ILMN_192674	ILMN_321150	ZFP422-RS1	XM_001480577.1	XM_001480577.1		77652	149268744	XM_001480577.1	Zfp422-rs1	XP_001480627.1	ILMN_2523128	002480634	S	3267	TATTGAGTTCATTGAATTGAAATGCATTTATAATTTATAATTTGGCAGGC	17	-	33376890-33376939	17qB1	PREDICTED: Mus musculus zinc finger protein 422, related sequence 1 (Zfp422-rs1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192674	ILMN_321150	ZFP422-RS1	XM_001480577.1	XM_001480577.1		77652	149268744	XM_001480577.1	Zfp422-rs1	XP_001480627.1	ILMN_1215336	000450280	S	56	GTGCTCCATCGACCTTGTTGACCGTGCTTTCACTTAGGGAGGACACCTGG	17	-	33391985-33391985:33391986-33392034	17qB1	PREDICTED: Mus musculus zinc finger protein 422, related sequence 1 (Zfp422-rs1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_192674	ILMN_321150	ZFP422-RS1	XM_001480577.1	XM_001480577.1		77652	149268744	XM_001480577.1	Zfp422-rs1	XP_001480627.1	ILMN_1235833	007210209	S	665	CGCCTCATCAAGATTCTAAGAGAGCCCACGCTGGAGATGAGCTACATGAG	17	-	33379492-33379541	17qB1	PREDICTED: Mus musculus zinc finger protein 422, related sequence 1 (Zfp422-rs1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_186729	ILMN_236723	ATP13A4	NM_172613.3	NM_172613.3		224079	142345685	NM_172613.3	Atp13a4	NP_766201.2	ILMN_2721169	007610148	S	3656	TGTCCTACAGCAACCCGGTGTTTGAGAGCAATGAGGAGCAACTTTGAAGG	16	-	29396475-29396478:29396479-29396524	16qB2	Mus musculus ATPase type 13A4 (Atp13a4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	4631413J11Rik; 9330174J19Rik; 4832416L12	4631413J11Rik; 9330174J19Rik; 4832416L12
Mus musculus	RefSeq	ILMN_223025	ILMN_223025	IL18	NM_008360.1	NM_008360.1		16173	6680412	NM_008360.1	Il18	NP_032386.1	ILMN_1236517	003420301	S	454	CCCTCTCTGTGAAGGATAGTAAAATGTCTACCCTCTCCTGTAAGAACAAG	9	+	50387461-50387510	9qA5.3	Mus musculus interleukin 18 (Il18), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence TAS];  [goid 8625] [evidence TAS]; Any process by which an organism enters and maintains a periodic, readily reversible state of reduced awareness and metabolic activity. Usually accompanied by physical relaxation, the onset of sleep in humans and other mammals is marked by a change in the electrical activity of the brain [goid 30431] [evidence ISS]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence ISS]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence ISS]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence ISS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence ISS]; The chemical reactions and pathways resulting in the formation of interleukin-13 [goid 42231] [evidence TAS]; The chemical reactions and pathways resulting in the formation of interferon-gamma [goid 42095] [evidence IMP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]	Il-18; Igif	Il-18; Igif
Mus musculus	RefSeq	ILMN_210335	ILMN_210335	EIF2S2	NM_026030.2	NM_026030.2		67204	115311551	NM_026030.2	Eif2s2	NP_080306.1	ILMN_1256795	006590333	S	2283	GAAATGGCAGAAGGAACCTTCTCTCAAGCAGGTAGGTCAAGAGATGGGCC	2	-	154697326-154697375	2qH1	Mus musculus eukaryotic translation initiation factor 2, subunit 2 (beta) (Eif2s2), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2810026E11Rik; D2Ertd303e; EIF2; MGC130606; 38kDa; EIF2B; AW822225; AA986487; AA571381; AA408636	2810026E11Rik; D2Ertd303e; EIF2; MGC130606; 38kDa; EIF2B; AW822225; AA986487; AA571381; AA408636
Mus musculus	RefSeq	ILMN_210335	ILMN_210335	EIF2S2	NM_026030.2	NM_026030.2		67204	115311551	NM_026030.2	Eif2s2	NP_080306.1	ILMN_2774435	005260240	S	1614	GCAGATACTGGAGCTGGGCAGCCATTTTTCCTTTTAGTGTCTCTTGAAGC	2	-	154697995-154698044	2qH1	Mus musculus eukaryotic translation initiation factor 2, subunit 2 (beta) (Eif2s2), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2810026E11Rik; D2Ertd303e; EIF2; MGC130606; 38kDa; EIF2B; AW822225; AA986487; AA571381; AA408636	2810026E11Rik; D2Ertd303e; EIF2; MGC130606; 38kDa; EIF2B; AW822225; AA986487; AA571381; AA408636
Mus musculus	RefSeq	ILMN_217899	ILMN_217899	CD2BP2	NM_027353.2	NM_027353.2		70233	31542360	NM_027353.2	Cd2bp2	NP_081629.1	ILMN_2801999	001240451	S	3041	GTTCGGAACTGGGTCTATTCTGGGTGGTAAGACCATGGACTTTGTTAAGC	7	-	126983001-126983050	7qF3	Mus musculus CD2 antigen (cytoplasmic tail) binding protein 2 (Cd2bp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410024K20Rik; 1500011B02Rik; AW048183	2410024K20Rik; 1500011B02Rik; AW048183
Mus musculus	RefSeq	ILMN_217899	ILMN_217899	CD2BP2	NM_027353.2	NM_027353.2		70233	31542360	NM_027353.2	Cd2bp2	NP_081629.1	ILMN_2689056	001430358	S	2687	TGATTATTTGGGCCATTGTAGTCATGGGTCCTTGCTGATCCCTAATGAGA	7	-	126983355-126983404	7qF3	Mus musculus CD2 antigen (cytoplasmic tail) binding protein 2 (Cd2bp2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2410024K20Rik; 1500011B02Rik; AW048183	2410024K20Rik; 1500011B02Rik; AW048183
Mus musculus	Riken	ILMN_202908	ILMN_202908	6530443I23RIK	ri|6530443I23|PX00049O05|AK032690|3586					AK032690	6530443I23Rik		ILMN_1222858	005670600	S	3155	CAGTCGCAGGTGGGCAATAAATTGGTGTGTCAAGAAATGGATCCTGAGAG										
Mus musculus	RefSeq	ILMN_194088	ILMN_236748	CBX6	NM_028763.3	NM_028763.3		494448	61657983	NM_028763.3	Cbx6	NP_083039.2	ILMN_2598604	001030746	S	3150	AAAGAAGTTGTGTTTTCAGAGGTGATTTTATGACAGGAAAGTGAAAGTTA	15	-	79656577-79656626	15qE1	Mus musculus chromobox homolog 6 (Cbx6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_202337	ILMN_236748	CBX6	NM_028763.3	NM_028763.3		494448	61657983	NM_028763.3	Cbx6	NP_083039.2	ILMN_1258688	000010730	S	5315	GCCAGGGGAGGGCGGGCTCGTGCTGATCACTCTGTCTTGTACGTTTTGTT	15	-	79654412-79654461	15qE1	Mus musculus chromobox homolog 6 (Cbx6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_187598	ILMN_228196	ORF34	NM_198105.2	NM_198105.2		207375	126723306	NM_198105.2	ORF34	NP_932773.2	ILMN_2633558	000020167	S	3154	CCCCTTCCAGCTCCATCCCAGTGCGCCTTATCCAGAGACAGTAATGAGTG	X	+	147904124-147904173	XqF3	Mus musculus open reading frame 34 (ORF34), mRNA.				D930001I21Rik	D930001I21Rik
Mus musculus	RefSeq	ILMN_213488	ILMN_213488	DUSP3	NM_028207.1	NM_028207.1		72349	21312313	NM_028207.1	Dusp3	NP_082483.1	ILMN_2918927	001090575	S	1034	ACACGCCCTGCTGAGGCAGACGAATGACATTAAGTTCTGAAGCAGAGTGG	11	-	101790332-101790381	11qD	Mus musculus dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) (Dusp3), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IDA]	VHR; 2210015O03Rik; T-DSP11; 5031436O03Rik	VHR; 2210015O03Rik; T-DSP11; 5031436O03Rik
Mus musculus	RefSeq	ILMN_222657	ILMN_312508	LOC100043836	XM_001481113.1	XM_001481113.1		100043836	149256693	XM_001481113.1	LOC100043836	XP_001481163.1	ILMN_2752974	007000458	S	245	CTTCTGGAACCCAAAATTATGGAAGCCATGGTTGCCAGCCCTGAATGCCT	7	-	32489026-32489055:32490050-32490069	7qB1	PREDICTED: Mus musculus similar to lacrimal androgen-binding protein delta, transcript variant 1 (LOC100043836), mRNA.					
Mus musculus	MEEBO	ILMN_191596	ILMN_191596	2210404O09RIK	scl070081.2_14				51770036	XM_285210	2210404O09Rik		ILMN_2480480	007040671	S	10	ATGTAGGTTGATATTGAGCAAATGTGGAGACAAATGCATTAAACAGGAGA										
Mus musculus	Riken	ILMN_201781	ILMN_201781	2210409F01RIK	ri|2210409F01|ZX00054C12|AK008871|729					AK008871	2210409F01Rik		ILMN_1253307	002000332	S	384	GAGGGAGACTCAAGGGCAGCGCGGGACTCTACAACTATGTGGGGCTCCCT										
Mus musculus	MEEBO	ILMN_194448	ILMN_194448	AMBIONRNASPIKE2_516	AmbionRNASpike2_516						AmbionRNASpike2_516		ILMN_2506500	006330301	S	18	GCTTAATTGCCGCACTTTGATGGTCAGTCGAAAACTATCATCGGAGGGGC										
Mus musculus	RefSeq	ILMN_214607	ILMN_214607	RPL3L	NM_025425.3	NM_025425.3		66211	146134924	NM_025425.3	Rpl3l	NP_079701.1	ILMN_2649810	001850100	S	962	GCACACCTGGGATGTAGCACTCTTGCTATCTGTCCGGTCCTTTTTGTTCA				17qA3.3	Mus musculus ribosomal protein L3-like (Rpl3l), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1110057H16Rik	1110057H16Rik
Mus musculus	Riken	ILMN_206626	ILMN_206626	A930103B21RIK	ri|A930103B21|PX00312G21|AK080760|2661					AK080760	A930103B21Rik		ILMN_1238239	007650364	S	2237	GGCCGGATGCAGGGAAAGGGAAAAAACACCCACCAATCCCTGAGCTCCAC										
Mus musculus	RefSeq	ILMN_215873	ILMN_215873	ATRX	NM_009530.2	NM_009530.2		22589	154091015	NM_009530.2	Atrx	NP_033556.2	ILMN_2664654	000450400	S	7462	GCAGCAACAGCAACAATTGACTTATCAGCAAGCAACACTGAGTCACCTCA				XqD	Mus musculus alpha thalassemia/mental retardation syndrome X-linked homolog (human) (Atrx), mRNA.	A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IDA]	The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DXHXS6677E; ZNF-HX; XH2; ATR2; MRXS3; HP1-BP38; RAD54L; Hp1bp2; Hp1bp38; Rad54; Xnp	DXHXS6677E; ZNF-HX; XH2; ATR2; MRXS3; HP1-BP38; RAD54L; Hp1bp2; Hp1bp38; Rad54; Xnp
Mus musculus	RefSeq	ILMN_215873	ILMN_215873	ATRX	NM_009530.2	NM_009530.2		22589	154091015	NM_009530.2	Atrx	NP_033556.2	ILMN_1219709	006110017	S	638	CCAGAGCCAGTGCTGAATGAAGACAAAGATGATTTTAAAGGGCCTGAATT				XqD	Mus musculus alpha thalassemia/mental retardation syndrome X-linked homolog (human) (Atrx), mRNA.	A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IDA]	The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DXHXS6677E; ZNF-HX; XH2; ATR2; MRXS3; HP1-BP38; RAD54L; Hp1bp2; Hp1bp38; Rad54; Xnp	DXHXS6677E; ZNF-HX; XH2; ATR2; MRXS3; HP1-BP38; RAD54L; Hp1bp2; Hp1bp38; Rad54; Xnp
Mus musculus	RefSeq	ILMN_215873	ILMN_215873	ATRX	NM_009530.2	NM_009530.2		22589	154091015	NM_009530.2	Atrx	NP_033556.2	ILMN_1223304	004590121	S	3269	GGTCCTTTTTCTAAAGGCATAAAGCAAAGTAAAACTGACACAGCTGGTGG				XqD	Mus musculus alpha thalassemia/mental retardation syndrome X-linked homolog (human) (Atrx), mRNA.	A compact and highly condensed form of chromatin [goid 792] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IDA]	The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	DXHXS6677E; ZNF-HX; XH2; ATR2; MRXS3; HP1-BP38; RAD54L; Hp1bp2; Hp1bp38; Rad54; Xnp	DXHXS6677E; ZNF-HX; XH2; ATR2; MRXS3; HP1-BP38; RAD54L; Hp1bp2; Hp1bp38; Rad54; Xnp
Mus musculus	RefSeq	ILMN_201260	ILMN_201260	LOC385002	XM_357981.1	XM_357981.1			38090238	XM_357981.1	LOC385002		ILMN_2541663	002650722	S	513	GGCAGCCATAGGACCCAACCTTCAATTATATCACCTCCCAGACAAGCCTC										
Mus musculus	RefSeq	ILMN_211680	ILMN_211680	MAGMAS	NM_025571.1	NM_025571.1		66449	13385011	NM_025571.1	Magmas	NP_079847.1	ILMN_2976867	004880632	S	430	GCCCAGGAAGACAGAGAGAAAGGGCAGAAGCCCAAAACGTGACTGCTGGG	16	-	4616538-4616546:4616547-4616587	16qA1	Mus musculus mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction (Magmas), nuclear gene encoding mitochondrial protein, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	AV006767; CGI-136; 2010110I09Rik	AV006767; CGI-136; 2010110I09Rik
Mus musculus	MEEBO	ILMN_194956	ILMN_194956	A930029B02RIK	scl17591.1.679_1				31340979	NM_178779	A930029B02Rik		ILMN_1255231	003310343	S	1	GAGGGAGGAGTCTAGGCTATTGCCTTTCCCCTGGGTTCTTTTTGGCTGCC										
Mus musculus	MEEBO	ILMN_194956	ILMN_194956	A930029B02RIK	scl17591.1.679_1				31340979	NM_178779	A930029B02Rik		ILMN_2774927	004880110	S	382	CCAAACGACTTACTGTTTCCAGCTTGATAGTCAACACGCAGAAGGGGGTG										
Mus musculus	RefSeq	ILMN_198186	ILMN_240844	LOC637809	XM_001003980.1	XM_001003980.1		637809	94402978	XM_001003980.1	LOC637809	XP_001003980.1	ILMN_1236658	004560050	S	409	CCTTCAAAAGGTACAGAGCCTTCACCTGCTCTGCCCGGATGCTGCACTTA					PREDICTED: Mus musculus similar to HBS1-like protein (LOC637809), mRNA.					
Mus musculus	RefSeq	ILMN_198712	ILMN_198712	LOC237188	XM_205338.2	XM_205338.2			38086990	XM_205338.2	LOC237188		ILMN_1244880	000050482	S	754	GGTCCTGGGGACAGGAGTAACTTTGACGACTCTAAGGAAGAGATCCAGGT										
Mus musculus	RefSeq	ILMN_216133	ILMN_235553	DNTT	NM_001043228.1	NM_001043228.1		21673	112734840	NM_001043228.1	Dntt	NP_001036693.1	ILMN_1232383	000130131	S	1181	GACTGGACATGATGTAGACTTTCTAATTACCAGCCCAGAAGCCACAGAGG	19	+	41122028-41122077	19qC3	Mus musculus deoxynucleotidyltransferase, terminal (Dntt), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IDA]; The covalent alteration of one or more nucleotide sites in DNA, resulting in a change in its properties [goid 6304] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 3912] [evidence IDA]	Tdt; BB160593	Tdt; BB160593
Mus musculus	RefSeq	ILMN_220111	ILMN_220111	PDE1A	NM_016744.3	NM_016744.3		18573	141801836	NM_016744.3	Pde1a	NP_058024.2	ILMN_2754377	007210632	S	1609	CGCTCTCAGCTGTGGATCTGAAGAGTTTCAAAAACAACCTGGTGGACATC	2	-	79705237-79705286	2qC3	Mus musculus phosphodiesterase 1A, calmodulin-dependent (Pde1a), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]	MGC116577; AW125737; AI987702	MGC116577; AW125737; AI987702
Mus musculus	RefSeq	ILMN_220111	ILMN_220111	PDE1A	NM_016744.3	NM_016744.3		18573	141801836	NM_016744.3	Pde1a	NP_058024.2	ILMN_2717749	004280286	S	1584	GATGGGAGCTATGCCCCAGACTACTCGCTCTCAGCTGTGGATCTGAAGAG	2	-	79705262-79705311	2qC3	Mus musculus phosphodiesterase 1A, calmodulin-dependent (Pde1a), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate. The reaction is calmodulin and calcium-sensitive [goid 48101] [evidence ISO]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is regulated by calmodulin [goid 4117] [evidence ISO]	MGC116577; AW125737; AI987702	MGC116577; AW125737; AI987702
Mus musculus	RefSeq	ILMN_198796	ILMN_242403	EG620835	XM_913238.3	XM_913238.3		620835	149257416	XM_913238.3	EG620835	XP_918331.3	ILMN_1213212	004150528	S	2029	ACTGTCCCCGGAAGAAGAATGAGATGGCTGCTTGAGATAGGGGCACCAAA					PREDICTED: Mus musculus predicted gene, EG620835 (EG620835), mRNA.					
Mus musculus	RefSeq	ILMN_216596	ILMN_216596	GOLT1A	NM_026680.4	NM_026680.4		68338	142388699	NM_026680.4	Golt1a	NP_080956.1	ILMN_1240839	003180523	S	275	TTCCTGGGGGGTGTCGCCATTGTGCTGCTGCGATGGCCCCTGCTGGGCAT	1	+	135211729-135211778	1qE4	Mus musculus golgi transport 1 homolog A (S. cerevisiae) (Golt1a), mRNA.				0610012C01Rik; metastatin; Kiss1	0610012C01Rik; metastatin; Kiss1
Mus musculus	MEEBO	ILMN_194937	ILMN_194937	HNRPC	scl45595.9_431				8393543	NM_016884	Hnrpc		ILMN_2511051	005960035	S	10	CCCATGATAAAACTGAGGAGAGGCTGATCTAGGGGCTTCCCTTGGCTCCA										
Mus musculus	RefSeq	ILMN_223052	ILMN_226844	PDZD2	XM_920241.2	XM_920241.2		68070	94398382	XM_920241.2	Pdzd2	XP_925334.1	ILMN_1218243	003190367	S	953	CTGTGAACTTCAGAGAACATTCTGGAAGAATGAAGACTATCAGTCACATG				15qA1	PREDICTED: Mus musculus PDZ domain containing 2, transcript variant 7 (Pdzd2), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence ISA]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]		
Mus musculus	RefSeq	ILMN_243302	ILMN_243302	PUS10	NM_001033654.2	NM_001033654.2		74467	75991713	NM_001033654.2	Pus10	NP_001028826.1	ILMN_3148175	002060300	A	2583	GTCAGGAGCACCTGCATCTCCTGTGGGTGACAGTGTCCTAAGAAGGACAG	11	+	23632282-23632331	11qA3.2	Mus musculus pseudouridylate synthase 10 (Pus10), transcript variant 2, mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	C77560; RP23-164N15.2; 2810013G11Rik; AU014648; 4933435A13Rik	C77560; RP23-164N15.2; 2810013G11Rik; AU014648; 4933435A13Rik
Mus musculus	RefSeq	ILMN_215737	ILMN_215737	RASSF5	NM_018750.2	NM_018750.2		54354	60097928	NM_018750.2	Rassf5	NP_061220.2	ILMN_2825020	006590044	S	3037	CTGCAAACACTGTGAATGCTGCTGAGAACGTCCCCCCATGGATGGCTTTT	1	-	133004274-133004323	1qE4	Mus musculus Ras association (RalGDS/AF-6) domain family 5 (Rassf5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Nore1B; Rapl; MGC107647; Maxp1; AU042887; 1300019G20Rik; Nore1; Nore1A	Nore1B; Rapl; MGC107647; Maxp1; AU042887; 1300019G20Rik; Nore1; Nore1A
Mus musculus	Riken	ILMN_203738	ILMN_203738	9830143C23RIK	ri|9830143C23|PX00118L10|AK036624|2618					AK036624	9830143C23Rik		ILMN_1248966	004920338	S	1899	TCTGACCAGCACACCTTCAAAAGACTGGCAACAAGAGTTACAAGGTGCTG										
Mus musculus	RefSeq	ILMN_210917	ILMN_210917	TMEM138	NM_028411.2	NM_028411.2		72982	142374796	NM_028411.2	Tmem138	NP_082687.1	ILMN_2610554	003370162	S	561	AAAAGGACGGCCGTGAGACTGGGTGACCCCCGCTTTTACCAGGACTCACT	19	-	10645682-10645731	19qA	Mus musculus transmembrane protein 138 (Tmem138), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC129472; 1700113I01Rik; 2900055D14Rik	MGC129472; 1700113I01Rik; 2900055D14Rik
Mus musculus	RefSeq	ILMN_196617	ILMN_196617	CLCNK1	XM_144070.1	XM_144070.1			20849055	XM_144070.1	Clcnk1		ILMN_1242901	005560017	S	147	GTGACCTTCGTTGTTCCTGTCGCTCACGCTCTAAATGGTCCGCCCAAGGG										
Mus musculus	RefSeq	ILMN_212252	ILMN_212252	CDKN2AIPNL	NM_029976.2	NM_029976.2		52626	31542452	NM_029976.2	Cdkn2aipnl	NP_084252.1	ILMN_1236906	005820224	S	1709	GGCCTTCATCCATTCTAATCATCTGCAGACTCGTGAGGCTTAAAAACAAA	11	+	51790715-51790764	11qB1.3	Mus musculus CDKN2A interacting protein N-terminal like (Cdkn2aipnl), mRNA.				A430101B06Rik; MNCb-1520; AA409260	A430101B06Rik; MNCb-1520; AA409260
Mus musculus	RefSeq	ILMN_223017	ILMN_223017	KRT7	NM_033073.2	NM_033073.2		110310	31981434	NM_033073.2	Krt7	NP_149064.1	ILMN_2961152	007330477	S	1400	CTCAGGGCCTATTCCATCAAGACCACATCTACTACCCGCAGGGGCACCCA	15	+	101258051-101258096:101258097-101258100	15qF2	Mus musculus keratin 7 (Krt7), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	K7; MGC11625; Krt2-7; D15Wsu77e	K7; MGC11625; Krt2-7; D15Wsu77e
Mus musculus	MEEBO	ILMN_223175	ILMN_223175	BC003965	scl0214489.1_247	XM_128528.2			38082054	XM_128528.2	BC003965		ILMN_2760295	004860382	S	783	CGTTCATCTGGTGGAGGTGTTACCTGCAGTTCATTCGCTTTCCGAGACAG										
Mus musculus	RefSeq	ILMN_204183	ILMN_243590	NEK1	XM_973759.1	XM_973759.1		18004	94385041	XM_973759.1	Nek1	XP_978853.1	ILMN_1253727	000360189	S	2268	CTTATTGAAGCTGCCTCCTTGCCAGTGTCGTTAGACCGTAGTCTCAAGAC				8qB3.1	PREDICTED: Mus musculus NIMA (never in mitosis gene a)-related expressed kinase 1, transcript variant 1 (Nek1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IMP]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISA]		
Mus musculus	RefSeq	ILMN_213282	ILMN_213282	NPB	NM_153288.3	NM_153288.3		208990	142358993	NM_153288.3	Npb	NP_695020.1	ILMN_2635572	004900358	S	308	GCGGCAACTCAACAGCCGAGGGACTTTCCAGTGTAAAGCGGACGTCTTCT	11	+	120470173-120470222	11qE2	Mus musculus neuropeptide B (Npb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence ISO]	Interacting selectively with a G-protein-coupled receptor [goid 1664] [evidence ISO]		
Mus musculus	RefSeq	ILMN_191669	ILMN_191669	ZSCAN2	NM_009553.2	NM_009553.2		22691	31982821	NM_009553.2	Zscan2	NP_033579.1	ILMN_2481127	005670280	S	19	CCATTCTGGTGATGCACCAGCGAGCGCACTTGGGAGACAAGCCTTACAGG	7	+	88007012-88007061	7qD3	Mus musculus zinc finger and SCAN domain containing 2 (Zscan2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfp-29; Zfp29	Zfp-29; Zfp29
Mus musculus	RefSeq	ILMN_191669	ILMN_191669	ZSCAN2	NM_009553.2	NM_009553.2		22691	31982821	NM_009553.2	Zscan2	NP_033579.1	ILMN_2832322	004230653	S	1901	CCTCATGTGTGGCAAGAGCTTCAGCCGGGGCTCCATTCTGGTGATGCACC	7	+	88021014-88021063	7qD3	Mus musculus zinc finger and SCAN domain containing 2 (Zscan2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfp-29; Zfp29	Zfp-29; Zfp29
Mus musculus	RefSeq	ILMN_191669	ILMN_191669	ZSCAN2	NM_009553.2	NM_009553.2		22691	31982821	NM_009553.2	Zscan2	NP_033579.1	ILMN_2481125	000630086	S	17	CTCCATTCTGGTGATGCACCAGCGAGCGCACTTGGGAGACAAGCCTTACA	7	+	88007010-88007059	7qD3	Mus musculus zinc finger and SCAN domain containing 2 (Zscan2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	Zfp-29; Zfp29	Zfp-29; Zfp29
Mus musculus	Riken	ILMN_207071	ILMN_207071	9030013K10RIK	ri|9030013K10|PX00651O23|AK078840|2172					AK078840	9030013K10Rik		ILMN_1241194	002260309	S	1858	GTGTGTGCCTTCAAAGTGTCTCTCGGTATAAAGCCATGCTGGGGGGCTGG										
Mus musculus	RefSeq	ILMN_209702	ILMN_209702	GLRB	NM_010298.5	NM_010298.5		14658	145966909	NM_010298.5	Glrb	NP_034428.2	ILMN_1232399	001300139	S	1206	CCCAAAAGGGTTGAAGCCGAGAAGGCCCGAATAGCTAAGGCTGAGCAAGC				3qE3	Mus musculus glycine receptor, beta subunit (Glrb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence ISS]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine [goid 60012] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence ISS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine [goid 60012] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence ISS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine [goid 60012] [evidence IMP]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence ISS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence ISS]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time [goid 3964] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence ISS]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [evidence IMP]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [evidence ISS]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence IMP]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	spastic; AI853901; Glyrb; spa	spastic; AI853901; Glyrb; spa
Mus musculus	RefSeq	ILMN_209702	ILMN_209702	GLRB	NM_010298.5	NM_010298.5		14658	145966909	NM_010298.5	Glrb	NP_034428.2	ILMN_2685831	003130095	S	2406	GGTTGGTATGGAGAGCATTAAGCATAAGCCTTAAAAAGAGTTGCACACAT				3qE3	Mus musculus glycine receptor, beta subunit (Glrb), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence ISS]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IMP]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine [goid 60012] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence ISS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine [goid 60012] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence ISS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine [goid 60012] [evidence IMP]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence ISS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence ISS]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes RNA-template-directed extension of the 3'- end of a DNA strand by one deoxynucleotide at a time [goid 3964] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence ISS]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [evidence IMP]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [evidence ISS]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence IMP]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	spastic; AI853901; Glyrb; spa	spastic; AI853901; Glyrb; spa
Mus musculus	RefSeq	ILMN_198758	ILMN_237144	LOC670341	XR_002939.1	XR_002939.1		670341	94409091	XR_002939.1	LOC670341		ILMN_1256898	000050768	S	1209	GCTCCCCAAGGAGCTGCTGGACGACGAGGAATATGAAGAGATTGTAGACG					PREDICTED: Mus musculus similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b (LOC670341), mRNA.					
Mus musculus	RefSeq	ILMN_217022	ILMN_217022	OLFR887	NM_146423.1	NM_146423.1		258415	33239243	NM_146423.1	Olfr887	NP_666634.1	ILMN_2678229	000620328	S	586	CTGGTGGTTTTCATTATTGTGGGTTTTAATGTAACAGTGCCCATTCTGAC	9	+	37893008-37893057	9qA4	Mus musculus olfactory receptor 887 (Olfr887), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MOR162-5; C77344	MOR162-5; C77344
Mus musculus	RefSeq	ILMN_214333	ILMN_252639	GOLGA7B	NM_027694.1	NM_027694.1		71146	58037238	NM_027694.1	Golga7b	NP_081970.1	ILMN_2646949	007100068	S	2143	GAGGGATTGTTGGGCTCCCAGGAGAACCAAGCCAGCGTTTAGGTGGTCTT	19	+	42344202-42344251	19qC3	Mus musculus golgi autoantigen, golgin subfamily a, 7B (Golga7b), mRNA.				AI839934	AI839934
Mus musculus	RefSeq	ILMN_217008	ILMN_217008	IL3	NM_010556.4	NM_010556.4		16187	144227228	NM_010556.4	Il3	NP_034686.2	ILMN_1247309	003450634	S	482	GCCCGCATCTGGCTCCGTCTCTCCTAACCGTGGAACCGTGGAATGTTAAA	11	-	54078904-54078905:54078906-54078953	11qB1.3	Mus musculus interleukin 3 (Il3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte differentiation [goid 2763] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IGI]; The process of apoptosis in myeloid cells [goid 33028] [evidence IDA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IDA]; Interacting selectively with the interleukin-3 receptor [goid 5135] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]	Il-3; MCGF; HCGF; PSF; Csfmu; BPA	Il-3; MCGF; HCGF; PSF; Csfmu; BPA
Mus musculus	RefSeq	ILMN_198502	ILMN_332048	ZFP541	NM_001099277.1	NM_001099277.1		666528	149944582	NM_001099277.1	Zfp541	NP_001092747.1	ILMN_1258181	005270736	S	3880	AGTGTGGAGAGCCAGGGCGTGTTCCCTTGCAGAGAGTGTGAGAGGGTGTT				7qA2	Mus musculus zinc finger protein 541 (Zfp541), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]			EG666528; Znf541	EG666528; Znf541
Mus musculus	RefSeq	ILMN_211059	ILMN_211059	EG114600	NM_053251.1	NM_053251.1		114600	16716578	NM_053251.1	EG114600	NP_444481.1	ILMN_1257875	004290132	S	932	CCATCTCATTCCTTACCAGAGAGAAGGTGAACAGAAGGACAGATGACTTC	6	-	132064288-132064309:132064568-132064593:132064594-132064595	6qG1	Mus musculus predicted gene, EG114600 (EG114600), mRNA.				MP4; MP6	MP4; MP6
Mus musculus	RefSeq	ILMN_220027	ILMN_320207	1700018B24RIK	NR_003617.1	NR_003617.1		66332	153791198	NR_003617.1	1700018B24Rik		ILMN_1231777	001940010	S	3272	TCACATGAGCTTTGAGAATATTTGTCCTTGAAGTTTGTATTATCACCTGC				3qC	Mus musculus RIKEN cDNA 1700018B24 gene (1700018B24Rik), non-coding RNA.					
Mus musculus	RefSeq	ILMN_215511	ILMN_244950	EG433229	XM_899874.3	XM_899874.3		433229	149270442	XM_899874.3	EG433229	XP_904967.1	ILMN_2660466	000240259	S	868	TGGCTGACCTCATCGAGTCCATGCTGAAAAACCTCTCCCGGATTCACCCC	19	+	22012639-22012688	19qB	PREDICTED: Mus musculus predicted gene, EG433229, transcript variant 7 (EG433229), mRNA.					
Mus musculus	Riken	ILMN_207266	ILMN_207266	DCC	ri|G630068L10|PL00013B19|AK090377|2705					AK090377	Dcc		ILMN_1231359	007400220	S	2151	GGTTGGATTTATGTCCTTCTGGAAGGCAGGACCGCCTATGCCTTATTGAA						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IMP]; The process by which the anatomical structures of the spinal cord ventral commissure are generated and organized. Morphogenesis pertains to the creation of form [goid 21965] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Mus musculus	RefSeq	ILMN_198625	ILMN_324176	LOC331476	XM_001474143.1	XM_001474143.1		331476	149272058	XM_001474143.1	LOC331476	XP_001474193.1	ILMN_1251545	007610154	S	493	GAGAGCAAGACACGCAGGGACATTGAGGTGGACCCTTTGGAGTGGAAGCT				XqD	PREDICTED: Mus musculus similar to SUMO-1-specific protease (LOC331476), mRNA.					
Mus musculus	Riken	ILMN_202493	ILMN_202493	2310042P07RIK	ri|2310042P07|ZX00040C11|AK009764|854					AK009764	2310042P07Rik		ILMN_1233742	006060093	S	598	AAACAGCTCTGCTCAGAGCATTACTGGCCCTTGGTTTTGGTCCTGATGGC										
Mus musculus	RefSeq	ILMN_197771	ILMN_197771	LOC242259	XM_143556.3	XM_143556.3			38077914	XM_143556.3	LOC242259		ILMN_2529305	002120440	S	1294	AGCAGCTCCGTGGCAGTGGAAGACCTAGAAAGAAACGAAGGCTCTCCTTC										
Mus musculus	RefSeq	ILMN_214139	ILMN_214139	FASTK	NM_023229.2	NM_023229.2		66587	85861159	NM_023229.2	Fastk	NP_075718.2	ILMN_2847136	003930133	S	1488	AAGACCCTGCCCAAAGGGTGGTGCTGATGCTGAGAGAACGCTGGCATTTC	5	-	23947234-23947268:23947346-23947360	5qA3	Mus musculus Fas-activated serine/threonine kinase (Fastk), mRNA. XM_982432 XM_982470 XM_982509		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + Fas-activated serine/threonine protein = ADP + Fas-activated serine/threonine phosphoprotein [goid 33867] [evidence IEA]	610011K02Rik; 0610011K02Rik	610011K02Rik; 0610011K02Rik
Mus musculus	RefSeq	ILMN_214139	ILMN_214139	FASTK	NM_023229.2	NM_023229.2		66587	85861159	NM_023229.2	Fastk	NP_075718.2	ILMN_2672662	005420438	S	1437	ACCCACCACGGTCCTGCCAACAGGACCAGGCAAACTTTAACTCCACAACC	5	-	23947362-23947411	5qA3	Mus musculus Fas-activated serine/threonine kinase (Fastk), mRNA. XM_982432 XM_982470 XM_982509		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + Fas-activated serine/threonine protein = ADP + Fas-activated serine/threonine phosphoprotein [goid 33867] [evidence IEA]	610011K02Rik; 0610011K02Rik	610011K02Rik; 0610011K02Rik
Mus musculus	RefSeq	ILMN_213254	ILMN_213254	DENND5A	NM_021494.1	NM_021494.1		19347	39930408	NM_021494.1	Dennd5a	NP_067469.1	ILMN_3033866	007400524	I	277	AGTCGCTTCGCCGACTATTTTGTCATCTGCGGGCTGGACACCGAGACCGG	7	-	117103610-117103659	7qF1	Mus musculus DENN/MADD domain containing 5A (Dennd5a), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IDA]	AW496491; AJ245569; ORF37; mKIAA1091; 1500012B19Rik	AW496491; AJ245569; ORF37; mKIAA1091; 1500012B19Rik
Mus musculus	RefSeq	ILMN_213254	ILMN_213254	DENND5A	NM_021494.1	NM_021494.1		19347	39930408	NM_021494.1	Dennd5a	NP_067469.1	ILMN_3107607	000520121	A	4523	GCCACGCACAGGTGTGCGAGTGGGACATCCCATGCTCCAATCAAAGGGAT	7	-	117037677-117037726	7qF1	Mus musculus DENN/MADD domain containing 5A (Dennd5a), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IDA]	AW496491; AJ245569; ORF37; mKIAA1091; 1500012B19Rik	AW496491; AJ245569; ORF37; mKIAA1091; 1500012B19Rik
Mus musculus	RefSeq	ILMN_211928	ILMN_211928	CLP1	NM_133840.2	NM_133840.2		98985	118130843	NM_133840.2	Clp1	NP_598601.1	ILMN_2620844	007570719	S	1476	ATAGCAATCTTATTAAGGCAGCTGACAAGGCCCAACTAGCAGAAAGCACA	2	-	84563583-84563632	2qD	Mus musculus CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae) (Clp1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	RP23-399J8.1; AI462438; Heab	RP23-399J8.1; AI462438; Heab
Mus musculus	RefSeq	ILMN_240638	ILMN_240638	B020031M17RIK	NM_001033769.1	NM_001033769.1		333467	85702076	NM_001033769.1	B020031M17Rik	NP_001028941.1	ILMN_2997625	007100148	S	537	TTGTGGACATGGACAACGACAAAGATACAGAGGAGCCAGACCAACCCTCG	14	-	82304553-82304602		Mus musculus RIKEN cDNA B020031M17 gene (B020031M17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_200164	ILMN_200164	LOC385843	XM_358967.1	XM_358967.1			38080746	XM_358967.1	LOC385843		ILMN_1246677	007570040	S	2	TGGGGGAAAAGCCTGTTTCATTACAGCAGAAAGACCACCTCAACTCAGAG										
Mus musculus	RefSeq	ILMN_257108	ILMN_257108	EGFL7	NM_198725.1	NM_198725.1		353156	38570126	NM_198725.1	Egfl7	NP_942018.1	ILMN_3163288	002060328	A	1135	GTCATCCCTAGATCCCTTGTAGCCAGAGTTCAGGCGCTGTCTGGTGGTGC	2	+	26447993-26448042	2qA3	Mus musculus EGF-like domain 7 (Egfl7), transcript variant c, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IDA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [pmid 15085134] [evidence IEP]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [pmid 15162510] [evidence IEP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	VE-statin; Zneu1	VE-statin; Zneu1
Mus musculus	RefSeq	ILMN_193739	ILMN_236434	A230054D04RIK	NM_001081422.1	NM_001081422.1		665775	124487264	NM_001081422.1	A230054D04Rik	NP_001074891.1	ILMN_1230284	004120301	S	1060	GCTCAGCAGGAAAGCACTGACCCAAAAATTAAATCAATGGACAAAGGAGA	5	-	42223655-42223704	5qB3	Mus musculus RIKEN cDNA A230054D04 gene (A230054D04Rik), mRNA.				AI853319; mKIAA1327; FAM44A	AI853319; mKIAA1327; FAM44A
Mus musculus	RefSeq	ILMN_236434	ILMN_236434	A230054D04RIK	NM_001081422.1	NM_001081422.1		665775	124487264	NM_001081422.1	A230054D04Rik	NP_001074891.1	ILMN_2929621	005720162	S	9103	GTTAGTAAATCTCCCCCATTAGGAAGATCAAAGGCACAGCTCTCCCCTTC	5	-	42180164-42180188:42183036-42183060	5qB3	Mus musculus RIKEN cDNA A230054D04 gene (A230054D04Rik), mRNA.				AI853319; mKIAA1327; FAM44A	AI853319; mKIAA1327; FAM44A
Mus musculus	RefSeq	ILMN_193739	ILMN_236434	A230054D04RIK	NM_001081422.1	NM_001081422.1		665775	124487264	NM_001081422.1	A230054D04Rik	NP_001074891.1	ILMN_1230863	000010017	S	9406	CCATTGTTCATGGACGGTATTATGTACATTCACTTCAGATAAAGGAAGAT	5	-	42179861-42179910	5qB3	Mus musculus RIKEN cDNA A230054D04 gene (A230054D04Rik), mRNA.				AI853319; mKIAA1327; FAM44A	AI853319; mKIAA1327; FAM44A
Mus musculus	RefSeq	ILMN_203442	ILMN_236434	A230054D04RIK	NM_001081422.1	NM_001081422.1		665775	124487264	NM_001081422.1	A230054D04Rik	NP_001074891.1	ILMN_1225996	003400020	S	289	GACCCGCAGCTCGTTGCCATGATCGTAAACCACCTCAAGAGCCAGGGGCT	5	-	42235216-42235265	5qB3	Mus musculus RIKEN cDNA A230054D04 gene (A230054D04Rik), mRNA.				AI853319; mKIAA1327; FAM44A	AI853319; mKIAA1327; FAM44A
Mus musculus	RefSeq	ILMN_224208	ILMN_242894	SACM1L	NM_030692.3	NM_030692.3		83493	146149141	NM_030692.3	Sacm1l	NP_109617.1	ILMN_2776618	002760594	S	2966	TTTTCTAATAGTACCTTATGTTATCCATAAATATTTCTAAAAGCGCCTTT				9qF4	Mus musculus SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae) (Sacm1l), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	mKIAA0851; Sac1p; SAC1	mKIAA0851; Sac1p; SAC1
Mus musculus	RefSeq	ILMN_198675	ILMN_198675	LOC331583	XM_284761.2	XM_284761.2			38086782	XM_284761.2	LOC331583		ILMN_1218889	002030554	S	193	TTCCCTGGACATCCGCGAGGGAGAGGTAGACCACTTCATGACTACTCAGG										
Mus musculus	MEEBO	ILMN_192111	ILMN_192111	1500032P08RIK	scl7207.1.1_139						1500032P08Rik		ILMN_1225225	005360170	S	4	GCTGACCACAGGAACCTCACTTTTAGGAAAGGGCTAAGTTTTCAAGATGG										
Mus musculus	RefSeq	ILMN_212473	ILMN_255883	MARCKS	NM_008538.2	NM_008538.2		17118	113865974	NM_008538.2	Marcks	NP_032564.1	ILMN_1256142	001820224	S	2222	GCACATGAAGTTTGCAAGTCTCCACCCTGCCCATTTTTGTAAAACTGCAG	10	-	36854963-36855012	10qB1	Mus musculus myristoylated alanine rich protein kinase C substrate (Marcks), mRNA.	The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; The enlarged, fluid filled nucleus of a primary oocyte, the development of which is suspended in prophase I of the first meiotic division between embryohood and sexual maturity [goid 42585] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	PKCSL; Macs	PKCSL; Macs
Mus musculus	RefSeq	ILMN_233322	ILMN_233322	OLFR597	NM_001011845.1	NM_001011845.1		258135	58801447	NM_001011845.1	Olfr597	NP_001011845.1	ILMN_3160543	002650619	S	322	ACCTTACAGTGCATGGAGTCCGGCATTCTATTGGCAATGGCTTTTGATCG	7	+	110469248-110469297	7qE3	Mus musculus olfactory receptor 597 (Olfr597), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR23-2; GA_x5J8B7TU1BB-380-666	MOR23-2; GA_x5J8B7TU1BB-380-666
Mus musculus	RefSeq	ILMN_184502	ILMN_184502	VMN2R1	NM_019918.2	NM_019918.2		56544	114145502	NM_019918.2	Vmn2r1	NP_064302.2	ILMN_2419162	002260176	S	1559	ACTTTAGATCTACAAACTTTGAGCTTGTTATTCCAACGAATTCTACAATA	3	+	63905382-63905431	3qE1	Mus musculus vomeronasal 2, receptor 1 (Vmn2r1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Casrl1	Casrl1
Mus musculus	RefSeq	ILMN_184502	ILMN_184502	VMN2R1	NM_019918.2	NM_019918.2		56544	114145502	NM_019918.2	Vmn2r1	NP_064302.2	ILMN_1259367	000990577	S	1564	AGATCTACAAACTTTGAGCTTGTTATTCCAACGAATTCTACAATATTTTG	3	+	63905387-63905436	3qE1	Mus musculus vomeronasal 2, receptor 1 (Vmn2r1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	Casrl1	Casrl1
Mus musculus	RefSeq	ILMN_187370	ILMN_226993	FIBP	NM_021438.2	NM_021438.2		58249	110625665	NM_021438.2	Fibp	NP_067413.1	ILMN_1260261	001470328	S	1155	CCCTTTTCCTTCCTCCCTCCGACATACCCTGAGAATAAAGTTGCCATAAG	19	+	5464997-5465046	19qA	Mus musculus fibroblast growth factor (acidic) intracellular binding protein (Fibp), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with fibroblast growth factor [goid 17134] [evidence IEA]	2010005N21Rik; 2010004G08Rik; 3010027N18Rik	2010005N21Rik; 2010004G08Rik; 3010027N18Rik
Mus musculus	Riken	ILMN_206778	ILMN_206778	D930050H18RIK	ri|D930050H18|PX00204O02|AK086770|1941					AK086770	D930050H18Rik		ILMN_2582638	003830546	S	1575	TGGAACACAGTTCAATAGTGCTAGGAAAAGAAGTCTATCACCACGGGAGG										
Mus musculus	Riken	ILMN_206434	ILMN_206434	C230053I19RIK	ri|C230053I19|PX00175H15|AK082474|3647					AK082474	C230053I19Rik		ILMN_2580053	007550630	S	3319	TACTTCAATGCTGAGTGACTCTAACCAGCTATTAACAATTTTTTGTTTGT										
Mus musculus	RefSeq	ILMN_190915	ILMN_190915	VKORC1L1	NM_027121.3	NM_027121.3		69568	47717110	NM_027121.3	Vkorc1l1	NP_081397.1	ILMN_3142273	005420201	A	862	AATGTAGCCCTAGCCCCCAGTCCTCAACTAAAGTGAGCAGCCATTGCTAG	5	+	130458509-130458558	5qG1.3	Mus musculus vitamin K epoxide reductase complex, subunit 1-like 1 (Vkorc1l1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals. Vitamin K substances share a methylated naphthoquinone ring structure and vary in the aliphatic side chains attached to the molecule [goid 42373] [evidence ISO]		2310024K08Rik	2310024K08Rik
Mus musculus	RefSeq	ILMN_190915	ILMN_190915	VKORC1L1	NM_027121.3	NM_027121.3		69568	47717110	NM_027121.3	Vkorc1l1	NP_081397.1	ILMN_3064401	004540193	I	256	GGGGTCGAGGATTTGGTCTTTTGGGTTCCATTTTTGGAAAAGATGGTGTA	5	+	130454391-130454440	5qG1.3	Mus musculus vitamin K epoxide reductase complex, subunit 1-like 1 (Vkorc1l1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals. Vitamin K substances share a methylated naphthoquinone ring structure and vary in the aliphatic side chains attached to the molecule [goid 42373] [evidence ISO]		2310024K08Rik	2310024K08Rik
Mus musculus	RefSeq	ILMN_224154	ILMN_234495	FGB	NM_181849.2	NM_181849.2		110135	118130602	NM_181849.2	Fgb	NP_862897.1	ILMN_1218075	006350121	S	1521	TTACATTATGTTATTGGAATTTTCTTTGATACATTATATCCACTAAAGCT	3	-	82846229-82846278	3qE3	Mus musculus fibrinogen, B beta polypeptide (Fgb), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A highly soluble, elongated protein complex found in blood plasma and involved in clot formation. It is converted into fibrin monomer by the action of thrombin. In the mouse, fibrinogen is a hexamer, 46 nm long and 9 nm maximal diameter, containing two sets of nonidentical chains (alpha, beta, and gamma) linked together by disulfide bonds [goid 5577] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IDA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IEA]	Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	2510049G14Rik	2510049G14Rik
Mus musculus	RefSeq	ILMN_222201	ILMN_222201	COIL	NM_016706.2	NM_016706.2		12812	134053928	NM_016706.2	Coil	NP_057915.2	ILMN_2746210	007510392	S	2213	CAGGAGTTAGTGGGGTTGGATTTGTCAGAGGTGATGAGTTAAAGAGTCCT	11	+	88852533-88852582	11qC	Mus musculus coilin (Coil), mRNA.	A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [evidence IDA]; The nucleus of the female germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1674] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of an oxidation-reduction (redox) reaction that interconverts reduced sulfide groups and oxidized disulfide bonds in a substrate [goid 15036] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	p80-coilin; C79982; Cln80; MGC37472	p80-coilin; C79982; Cln80; MGC37472
Mus musculus	RefSeq	ILMN_207464	ILMN_207464	1700052N19RIK	NM_024261.2	NM_024261.2		73419	90093342	NM_024261.2	1700052N19Rik	NP_077223.2	ILMN_2985579	004200494	S	1759	TGCACTTGGTTTGGCTCTTGAGTTAGTGGCCCAGTGAACACATGCCTTGT	10	-	5891882-5891931	10qA1	Mus musculus RIKEN cDNA 1700052N19 gene (1700052N19Rik), mRNA. XM_974009 XM_982948				MGC102037	MGC102037
Mus musculus	RefSeq	ILMN_207488	ILMN_207464	1700052N19RIK	NM_024261.2	NM_024261.2		73419	90093342	NM_024261.2	1700052N19Rik	NP_077223.2	ILMN_1260593	005270762	I	2034	ATGCTGAAGTCCCCGCCACAGTGATGTCCAGATGAGCCCAGCGTCAGTCT	10	-	5891607-5891656	10qA1	Mus musculus RIKEN cDNA 1700052N19 gene (1700052N19Rik), mRNA. XM_974009 XM_982948				MGC102037	MGC102037
Mus musculus	RefSeq	ILMN_209257	ILMN_209257	2810406K13RIK	XM_133597.5	XM_133597.5		72184	94380877	XM_133597.5	2810406K13Rik	XP_133597.3	ILMN_2594076	002480044	S	1763	TGCAGCGCTGCACCAGCTCTCATGGCTGTGTCACCATCGTGCAGAGCCTG	7	+	106622347-106622396	7qE2	PREDICTED: Mus musculus RIKEN cDNA 2810406K13 gene, transcript variant 1 (2810406K13Rik), mRNA.					
Mus musculus	RefSeq	ILMN_216977	ILMN_216977	MTERFD2	NM_178051.3	NM_178051.3		69821	46852399	NM_178051.3	Mterfd2	NP_835152.1	ILMN_1236049	002940044	S	1229	ATGAGGGGTGCTTTGTTGTGGGTTCTTTGGGAGGCCCTACTCCATCCTAA	1	-	95197824-95197873	1qD	Mus musculus MTERF domain containing 2 (Mterfd2), mRNA.				1810059A23Rik; 4933412H03Rik	1810059A23Rik; 4933412H03Rik
Mus musculus	RefSeq	ILMN_216977	ILMN_216977	MTERFD2	NM_178051.3	NM_178051.3		69821	46852399	NM_178051.3	Mterfd2	NP_835152.1	ILMN_2679695	000050047	S	313	CCGTTCCCTCCAGGACATGGGTTTTGCTGAAGCCCACATTCACAGCTTGT	1	-	95201367-95201416	1qD	Mus musculus MTERF domain containing 2 (Mterfd2), mRNA.				1810059A23Rik; 4933412H03Rik	1810059A23Rik; 4933412H03Rik
Mus musculus	RefSeq	ILMN_216977	ILMN_216977	MTERFD2	NM_178051.3	NM_178051.3		69821	46852399	NM_178051.3	Mterfd2	NP_835152.1	ILMN_1218949	006960315	S	3195	CGTTCCCAGAGGTGCTGCTTGATCTTGCTGTTCACTGTTAACACTGTAGC	1	-	95195858-95195907	1qD	Mus musculus MTERF domain containing 2 (Mterfd2), mRNA.				1810059A23Rik; 4933412H03Rik	1810059A23Rik; 4933412H03Rik
Mus musculus	RefSeq	ILMN_217701	ILMN_217701	ACSBG1	NM_053178.1	NM_053178.1		94180	16716464	NM_053178.1	Acsbg1	NP_444408.1	ILMN_2788036	003780390	S	2283	GGTGGAGAACTGGGACCCACCATGAAATTGAAACGGCTCACGGTTCTGGA	9	-	54403576-54403613:54407153-54407164	9qA5.3	Mus musculus acyl-CoA synthetase bubblegum family member 1 (Acsbg1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [evidence ISS]; The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [evidence ISS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + a very-long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; very-long-chain fatty acids have chain lengths of greater than C18 [goid 31957] [evidence ISS]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence ISS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	R75185; BG1; E230019G03Rik; mKIAA0631; Lpd; Bgm	R75185; BG1; E230019G03Rik; mKIAA0631; Lpd; Bgm
Mus musculus	RefSeq	ILMN_201425	ILMN_201425	LOC385143	XM_358084.1	XM_358084.1			38093623	XM_358084.1	LOC385143		ILMN_1236297	004880348	S	1585	TGCCAAGACCTGAACAGACCAATCTACTGTAGACTGAGGGACCGAGAAGG										
Mus musculus	RefSeq	ILMN_243397	ILMN_243397	OLFR598	NM_001011793.1	NM_001011793.1		257975	58801351	NM_001011793.1	Olfr598	NP_001011793.1	ILMN_2840101	000430445	S	335	CCCTTCAGGGCATGGAGTCCGGCATTCTGTTGGCAATGGCTTTTGATCGA	7	+	110477336-110477385	7qE3	Mus musculus olfactory receptor 598 (Olfr598), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR23-5; MOR23-4P	MOR23-5; MOR23-4P
Mus musculus	RefSeq	ILMN_212247	ILMN_212247	USE1	NM_025917.3	NM_025917.3		67023	146134882	NM_025917.3	Use1	NP_080193.1	ILMN_2624385	004260722	S	3	TTCTAAGATGGCGCAGGCGGAAGGAGCCTATCATCGCCCGCTGGCGACGT				8qB3.3	Mus musculus unconventional SNARE in the ER 1 homolog (S. cerevisiae) (Use1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IMP]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mED2; Q-SNARE; Ed2; AV002165; 5730403H22Rik; D12	mED2; Q-SNARE; Ed2; AV002165; 5730403H22Rik; D12
Mus musculus	RefSeq	ILMN_212247	ILMN_212247	USE1	NM_025917.3	NM_025917.3		67023	146134882	NM_025917.3	Use1	NP_080193.1	ILMN_2667101	000070504	S	767	GCTTCGTGTTCATCAGCATGATCCTGTTTATCCGAATCATGCCCAGGCTG				8qB3.3	Mus musculus unconventional SNARE in the ER 1 homolog (S. cerevisiae) (Use1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IMP]; The directed movement of substances into, out of or within a lysosome [goid 7041] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	mED2; Q-SNARE; Ed2; AV002165; 5730403H22Rik; D12	mED2; Q-SNARE; Ed2; AV002165; 5730403H22Rik; D12
Mus musculus	RefSeq	ILMN_219781	ILMN_251284	CEP250	NM_008383.2	NM_008383.2		16328	86355511	NM_008383.2	Cep250	NP_032409.2	ILMN_1213506	005090452	S	7212	CAGTCTGGACACTACTCAAAATACCCACAGGTAGTAGCCATAGGCAGGGC	2	+	155824134-155824167:155824168-155824183	2qH1	Mus musculus centrosomal protein 250 (Cep250), mRNA. XM_902553 XM_907859 XM_920619 XM_920625 XM_920632	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Cep2; Inmp; B230210E21Rik; AW490617	Cep2; Inmp; B230210E21Rik; AW490617
Mus musculus	RefSeq	ILMN_203326	ILMN_251284	CEP250	NM_008383.2	NM_008383.2		16328	86355511	NM_008383.2	Cep250	NP_032409.2	ILMN_1216380	006420128	S	757	CAGGCGCTGGAGAAGGAAGCCCATGAGAAGAGCCAGGAGTTAATGCAGCT	2	+	155791209-155791258	2qH1	Mus musculus centrosomal protein 250 (Cep250), mRNA. XM_902553 XM_907859 XM_920619 XM_920625 XM_920632	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Cep2; Inmp; B230210E21Rik; AW490617	Cep2; Inmp; B230210E21Rik; AW490617
Mus musculus	RefSeq	ILMN_215124	ILMN_215124	ZCCHC17	NM_153160.3	NM_153160.3		619605	148540169	NM_153160.3	Zcchc17	NP_694800.1	ILMN_1246034	006370079	S	375	CCCTCTCCATGAAAGTTGTCAACCAAGGAACTGGGAAAGACCTCGATCCC				4qD2.2	Mus musculus zinc finger, CCHC domain containing 17 (Zcchc17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence TAS]	pS1D; pNO40; 2810055E05Rik; HSPC251; LDC4	pS1D; pNO40; 2810055E05Rik; HSPC251; LDC4
Mus musculus	RefSeq	ILMN_223761	ILMN_223761	HDAC7	NM_019572.2	NM_019572.2		56233	40254547	NM_019572.2	Hdac7	NP_062518.2	ILMN_2768755	000870324	S	3760	CCCTTCAAAAGCACAACACAATCCCAGGGATGCCTGGTCACTGTCCCCAG	15	-	97623429-97623478	15qF1	Mus musculus histone deacetylase 7 (Hdac7), mRNA. XM_001003311 XM_001003316 XM_001004168 XM_001004172 XM_001004178 XM_001004180 XM_001004182 XM_001004187 XM_001004194 XM_001004198	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IDA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]	Hdac7; 5830434K02Rik	Hdac7; 5830434K02Rik
Mus musculus	Riken	ILMN_207190	ILMN_207190	MSH2	ri|8030473G08|PX00650P10|AK078775|1721					AK078775	Msh2		ILMN_1249751	005670187	S	1357	GCGGTATAGCGTCACACAAGCCTGGAGGGTGCTTTGGTCTTTGAGATAGC						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]; A heterodimer involved in binding to and correcting insertion/deletion mutations. In human the complex consists of two subunits, MSH2 and MSH3 [goid 32302] [evidence IEA]; A heterodimer involved in the recognition and repair of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MSH2 and MSH6 [goid 32301] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IGI]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IDA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence ISO]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IMP]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IMP]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IMP]; The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [evidence IMP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IMP]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IMP]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells [goid 19724] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IMP]; Pathways for DNA repair which occur after DNA has replicated, e.g. mismatch repair, and which involve translesion synthesis (TLS-type) DNA polymerases [goid 6301] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA recombination [goid 45910] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; The slowing of DNA synthesis in response to DNA damage by the prevention of new origin firing and the stabilization of slow replication fork progession [goid 31573] [evidence IGI]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IDA]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IGI]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IGI]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, also known as immunoglobulin gene segments, within a single locus following the induction of an immune response [goid 2204] [evidence IGI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IMP]; Interacting selectively with damaged DNA [goid 3684] [evidence IMP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IDA]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IMP]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IMP]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IMP]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence IDA]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [evidence ISO]		
Mus musculus	RefSeq	ILMN_221921	ILMN_221921	OLFR360	NM_146622.1	NM_146622.1		258615	33239255	NM_146622.1	Olfr360	NP_666833.1	ILMN_1224535	006100040	S	224	CCATCACTATTCCTCAGATGCTAGTGCACACACTCTCTGTAAATCGGAGC	2	+	36924050-36924099	2qB	Mus musculus olfactory receptor 360 (Olfr360), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR159-1	MOR159-1
Mus musculus	RefSeq	ILMN_221921	ILMN_221921	OLFR360	NM_146622.1	NM_146622.1		258615	33239255	NM_146622.1	Olfr360	NP_666833.1	ILMN_3006758	001780070	S	639	TTGGGGTTCTTATGTTCGAATAGGTATTGCCATGGCCCACATGCACTCCT	2	+	36924465-36924514	2qB	Mus musculus olfactory receptor 360 (Olfr360), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR159-1	MOR159-1
Mus musculus	MEEBO	ILMN_222012	ILMN_222012	9430056A22RIK	scl00403208.1_47	NM_207533.1			46518548	NM_207533.1	9430056A22Rik		ILMN_2743449	004070594	S	1830	AGGGTCATGTGACCACGAATATGTAAATAACGTCACCCAAATAACAGTTC										
Mus musculus	RefSeq	ILMN_229958	ILMN_229958	C230055K05RIK	NM_001039231.2	NM_001039231.2		626391	133778966	NM_001039231.2	C230055K05Rik	NP_001034320.2	ILMN_3162781	000160079	I	1253	GCCTTTGCACATGTGGTCTTCAAGGGCATTAAAAACCTAGAATGCAGTGA	5	-	105242355-105242404	5qE5	Mus musculus RIKEN cDNA C230055K05 gene (C230055K05Rik), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_210771	ILMN_210771	ADC	NM_172875.1	NM_172875.1		242669	27370329	NM_172875.1	Adc	NP_766463.1	ILMN_2609000	001660647	S	243	TGCATACTTTCTAAGGCGGTGGCCAAGGCAGCCAGCGGTGCTCCAAGGCA	4	-	128463809-128463858	4qD2.2	Mus musculus arginine decarboxylase (Adc), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]	The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups [goid 6596] [evidence IEA]; The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis [goid 6591] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: L-arginine = agmatine + CO2 [goid 8792] [evidence IDA]; Upregulation of the activity of the enzyme ornithine decarboxylase [goid 42978] [evidence IGI]; Catalysis of the reaction: L-ornithine = putrescine + CO2 [goid 4586] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	Odcp; 4933429I20Rik; B930082O19	Odcp; 4933429I20Rik; B930082O19
Mus musculus	MEEBO	ILMN_195645	ILMN_195645	0610007L01RIK	scl27163.9.1_177				51711227	XM_355643	0610007L01Rik		ILMN_1232042	002810427	S	1	GAGCCTGAGAACCTATTTAAAACAACAAATCCCACAAAGTAACACTTCAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_195645	ILMN_195645	0610007L01RIK	scl27163.9.1_177				51711227	XM_355643	0610007L01Rik		ILMN_2524361	007160600	S	868	GGACTGGTTCCTGTGCATCTTCACTCAGTCGGTCTTCAGGTATCACACAC						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_192913	ILMN_192913	C030026E19RIK	scl35852.1.830_43						C030026E19Rik		ILMN_2492491	006420021	S	4	CCCCTCAAATGGTCCCCAGTCAGGTCCTAAGGCTAAGGTCATCATAGCGT										
Mus musculus	RefSeq	ILMN_185632	ILMN_238774	HDAC3	NM_010411.2	NM_010411.2		15183	89257351	NM_010411.2	Hdac3	NP_034541.2	ILMN_1220353	001580224	S	1797	GCAGATGAAGTACAGTGGCAAGGAGGAGAGGGTGTGAAGCTCTAACTGGC	18	-	38096783-38096832	18qB3	Mus musculus histone deacetylase 3 (Hdac3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence TAS]; A protein complex that possesses histone deacetylase activity [goid 118] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence TAS]	Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence TAS]	AW537363	AW537363
Mus musculus	RefSeq	ILMN_212694	ILMN_212694	OLFR1366	NM_146283.1	NM_146283.1		258280	22129716	NM_146283.1	Olfr1366	NP_666395.1	ILMN_2629280	006860093	S	811	GATTCAGCTGCATCAGTAATTTTTATGGTTGTAGCCCCCGTATTGAATCC	13	-	21628967-21629016	13qA3.1	Mus musculus olfactory receptor 1366 (Olfr1366), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	RP23-298F22.6; MOR130-2	RP23-298F22.6; MOR130-2
Mus musculus	RefSeq	ILMN_220556	ILMN_220556	D19ERTD386E	NM_177464.4	NM_177464.4		52013	146198862	NM_177464.4	D19Ertd386e	NP_803415.1	ILMN_1250916	000990390	S	3708	CGTGGTAGAATGGGGCTCTTCAAATATCCCTCGATGACCCTGGCCTTGGC				19qC3	Mus musculus DNA segment, Chr 19, ERATO Doi 386, expressed (D19Ertd386e), mRNA.				AI450607; GIDRP86; 1700036B12Rik; C10orf28	AI450607; GIDRP86; 1700036B12Rik; C10orf28
Mus musculus	RefSeq	ILMN_213905	ILMN_213905	ICT1	NM_026729.1	NM_026729.1		68572	19387847	NM_026729.1	Ict1	NP_081005.1	ILMN_2642063	002000390	S	530	TGACTATGGACTGAAGTCGGCCCTCCCTGCTGGCATAGACCTGAGTGCCA	11	+	115272023-115272036:115272037-115272072	11qE2	Mus musculus immature colon carcinoma transcript 1 (Ict1), mRNA.		The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code) [goid 6415] [evidence IEA]	Involved in catalyzing the release of a nascent polypeptide chain from a ribosome [goid 3747] [evidence IEA]	1110002E03Rik; 1110001A02Rik	1110002E03Rik; 1110001A02Rik
Mus musculus	Riken	ILMN_207088	ILMN_207088	C330023J09RIK	ri|C330023J09|PX00667M18|AK082805|1232					AK082805	C330023J09Rik		ILMN_1215500	001010685	S	904	CACACTGGTTCCCTGGTCTGTGGTGTGAGGGCTATTATGGCTGGAAAGGC										
Mus musculus	RefSeq	ILMN_190109	ILMN_258728	TNF	NM_013693.2	NM_013693.2		21926	133892368	NM_013693.2	Tnf	NP_038721.1	ILMN_2467245	004830097	S	1187	AGGCTGGATAAGATCTCAGGCCTTCCTACCTTCAGACCTTTCCAGATTCT	17	-	35338045-35338094	17qB1	Mus musculus tumor necrosis factor (Tnf), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]; An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome [goid 1891] [evidence IDA]; Organelle consisting of networks of 60nm tubules organized around the microtubule organizing centre in some cell types. They transport receptors from late endosomes back to the plasma membrane for recycling and are also involved in membrane trafficking [goid 55037] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a osteoclast cell [goid 30316] [evidence IGI]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IMP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process of apoptosis in transformed cells, cells that have undergone changes manifested by escape from control mechanisms, increased growth potential, alterations in the cell surface, karyotypic abnormalities, morphological and biochemical deviations from the norm [goid 6927] [evidence TAS]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IDA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IDA];  [goid 8625] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; The migration of leukocytes from the blood vessels into the surrounding tissue [goid 45123] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; Any process that modulates the frequency, rate or extent of osteoclast differentiation [goid 45670] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process involving iron that activates or increases the rate of translational initiation [goid 45994] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46325] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IDA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IGI]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of hair follicle development [goid 51798] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IGI]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISO]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IDA]	Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IPI]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IDA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence TAS]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IDA]	TNFSF2; MGC151434; DIF; Tnfsf1a; TNF-alpha; Tnfa; TNFalpha	TNFSF2; MGC151434; DIF; Tnfsf1a; TNF-alpha; Tnfa; TNFalpha
Mus musculus	RefSeq	ILMN_210537	ILMN_210537	HBS1L	NM_019702.2	NM_019702.2		56422	110611221	NM_019702.2	Hbs1l	NP_062676.2	ILMN_1229378	000670164	S	2476	TAACTCAGTGGACTCGACTTCCAGCCAAACCAAATCCAAACGCTGTTCTG	10	+	21088378-21088427	10qA3	Mus musculus Hbs1-like (S. cerevisiae) (Hbs1l), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]	2810035F15Rik; AI326327; eRFS	2810035F15Rik; AI326327; eRFS
Mus musculus	RefSeq	ILMN_210537	ILMN_210537	HBS1L	NM_019702.2	NM_019702.2		56422	110611221	NM_019702.2	Hbs1l	NP_062676.2	ILMN_2776391	001030296	S	2381	CCAGAGGCCAGCACTGAACTGCCATTTCTTCCCTTTCGGGGTGGCAGTAA	10	+	21088283-21088332	10qA3	Mus musculus Hbs1-like (S. cerevisiae) (Hbs1l), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]	2810035F15Rik; AI326327; eRFS	2810035F15Rik; AI326327; eRFS
Mus musculus	RefSeq	ILMN_210537	ILMN_210537	HBS1L	NM_019702.2	NM_019702.2		56422	110611221	NM_019702.2	Hbs1l	NP_062676.2	ILMN_1220377	004860520	S	617	TGTGCCAAAAGTTGCTAAAATGACTGTATCCGGGAAGAAGCAGACCATGG	10	+	21056816-21056865	10qA3	Mus musculus Hbs1-like (S. cerevisiae) (Hbs1l), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]	2810035F15Rik; AI326327; eRFS	2810035F15Rik; AI326327; eRFS
Mus musculus	RefSeq	ILMN_200748	ILMN_200748	LOC381843	XM_355856.1	XM_355856.1			38085854	XM_355856.1	LOC381843		ILMN_2539862	004390523	S	273	CAGCTTCTTATCTCCACGTATGGCCCCAAAAGGCCCATCTCTAGCATTGG										
Mus musculus	RefSeq	ILMN_234559	ILMN_234559	CRIP3	NM_053250.1	NM_053250.1		114570	16716576	NM_053250.1	Crip3	NP_444480.1	ILMN_3104529	007100411	A	684	GCCATTCGCAGGAGTGATTAACCTAACTCAGGCTTCCCACCATCTCCTCC	17	+	45894630-45894679	17qC	Mus musculus cysteine-rich protein 3 (Crip3), transcript variant TLP-B, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IMP]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	TLP-A; TLP; Tlmp; TLP-B	TLP-A; TLP; Tlmp; TLP-B
Mus musculus	RefSeq	ILMN_195412	ILMN_195412	ZFP64	NM_009564.1	NM_009564.1		22722	6677622	NM_009564.1	Zfp64	NP_033590.1	ILMN_2515349	000620086	S	16	AGACAAACTGCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGCATAAAT	2	-	168780694-168780743	2qH3	Mus musculus zinc finger protein 64 (Zfp64), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195412	ILMN_195412	ZFP64	NM_009564.1	NM_009564.1		22722	6677622	NM_009564.1	Zfp64	NP_033590.1	ILMN_1214053	001690551	S	2149	GACAAACTGCGAGAGGAGTACTGTGAGAGGCTCCTGGTCCCGCATAAATA	2	-	168751087-168751136	2qH3	Mus musculus zinc finger protein 64 (Zfp64), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_195412	ILMN_195412	ZFP64	NM_009564.1	NM_009564.1		22722	6677622	NM_009564.1	Zfp64	NP_033590.1	ILMN_2929723	002450162	S	1945	ATTCAGGAGGGAACGACGGAAGTGACTGTGGTGAGCGATGGGGACCAGAG	2	-	168751291-168751340	2qH3	Mus musculus zinc finger protein 64 (Zfp64), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Mus musculus	RefSeq	ILMN_209828	ILMN_209828	FRYL	NM_177136.3	NM_177136.3		72313	119964713	NM_177136.3	Fryl	NP_796110.2	ILMN_2686425	005220767	S	2695	CTGAAGCATCCGAAGAGTTTTAAAGTGCATGTGCTGACGCCATGGCTAGT	5	-	73491014-73491063	5qC3.2	Mus musculus furry homolog-like (Drosophila) (Fryl), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	AI930088; 2510002A14Rik; 2010313D22Rik; 2310004H21Rik; mKIAA0826; 9030227G01Rik	AI930088; 2510002A14Rik; 2010313D22Rik; 2310004H21Rik; mKIAA0826; 9030227G01Rik
Mus musculus	RefSeq	ILMN_242360	ILMN_242360	AY761185	NM_001012640.1	NM_001012640.1		503556	85701433	NM_001012640.1	AY761185	NP_001012658.1	ILMN_2903718	000610097	S	236	AGTGCCCACAGTGCCCGGGGTGCCCGAGGTGCAATTGCATGACAAAATGA				8qA2	Mus musculus cDNA sequence AY761185 (AY761185), mRNA.		Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]			
Mus musculus	RefSeq	ILMN_201119	ILMN_201119	LOC384830	XM_357885.1	XM_357885.1			38089274	XM_357885.1	LOC384830		ILMN_1244365	000620452	S	251	GTCGAGCTGGGAAACTCACGGAGCTCCACAGTGAAGGTGGTAGTAGTGGA										
Mus musculus	RefSeq	ILMN_209858	ILMN_209858	PEX19	NM_023041.2	NM_023041.2		19298	31543532	NM_023041.2	Pex19	NP_075528.2	ILMN_2970834	006370181	S	2147	CTTTGAATCAACCTGCTTTTTCACAGTGGTTTTAAGCACCATGGTTGCCA	1	+	174065661-174065710	1qH3	Mus musculus peroxisome biogenesis factor 19 (Pex19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Pxf	Pxf
Mus musculus	RefSeq	ILMN_209858	ILMN_209858	PEX19	NM_023041.2	NM_023041.2		19298	31543532	NM_023041.2	Pex19	NP_075528.2	ILMN_1239087	006580563	S	1832	GGGGTGTAGCCAGAATATTTTTTCCCTGCAAGCCCTATGGGGTAGTATCT	1	+	174065346-174065395	1qH3	Mus musculus peroxisome biogenesis factor 19 (Pex19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Pxf	Pxf
Mus musculus	Riken	ILMN_201973	ILMN_201973	3110001E11RIK	ri|3110001E11|ZX00035E02|AK013941|1925					AK013941	3110001E11Rik		ILMN_1224456	004010026	S	1527	GGATCCTGTGGCAGGTTAATTCCCATCTTCCAGAGGAAACCACCACGCTG										
Mus musculus	RefSeq	ILMN_198680	ILMN_198680	LOC209474	XM_142194.2	XM_142194.2			38086816	XM_142194.2	LOC209474		ILMN_1245275	004850735	S	155	GCATTGGCAGCAGGTCCAGCAAAGGAGGGAAATTTGAGGCCGAGGACTTC										
Mus musculus	RefSeq	ILMN_196330	ILMN_323164	LOC100048355	XR_034424.1	XR_034424.1		100048355	149258109	XR_034424.1	LOC100048355		ILMN_1238889	005550209	S	1085	TGACTTTGCTCAGGAACGCAGATGGAAACGAGGTGTGGCCCGGAAGGTGG					PREDICTED: Mus musculus similar to Snf2-related CBP activator protein (LOC100048355), misc RNA.					
Mus musculus	Riken	ILMN_207213	ILMN_207213	C530044G15RIK	ri|C530044G15|PX00669H18|AK083075|3151					AK083075	C530044G15Rik		ILMN_1216584	005810463	S	2267	GAGAGTGTGCGTCAACAGTCTTCCACCAGCCAACCGCGGGACTACAGAAT										
Mus musculus	RefSeq	ILMN_223357	ILMN_223357	ENO2	NM_013509.2	NM_013509.2		13807	31982744	NM_013509.2	Eno2	NP_038537.1	ILMN_2763002	001090767	S	2254	GTCCCACAGTTGCCACCATCTCCGTGGCTTTGAAATGACCACCACCATTA	6	-	124711155-124711204	6qF2	Mus musculus enolase 2, gamma neuronal (Eno2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A multimeric enzyme complex, usually a dimer or an octamer, that catalyzes the conversion of 2-phospho-D-glycerate to phosphoenolpyruvate and water [goid 15] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 2-phospho-D-glycerate = phosphoenolpyruvate + H2O [goid 4634] [evidence IEA]	Eno-2; NSE; D6Ertd375e; AI837106	Eno-2; NSE; D6Ertd375e; AI837106
Mus musculus	RefSeq	ILMN_215009	ILMN_215009	OLFR957	NM_146745.2	NM_146745.2		258740	147898672	NM_146745.2	Olfr957	NP_666956.2	ILMN_1227471	007650286	S	547	CCACTCCTGGAACAATCCTGTTCCAATACATTTATCAATGAAATACTAGG				9qA5.1	Mus musculus olfactory receptor 957 (Olfr957), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR171-12	MOR171-12
Mus musculus	MEEBO	ILMN_216740	ILMN_216740	1700057H15RIK	scl078460.1_144	XM_287378.1			28546147	XM_287378.1	1700057H15Rik		ILMN_2674684	002760278	S	309	GAAACCAACTTGTGTTGGCTGCTTGGACTTGAAATGAACTGAGAGCCGTC										
Mus musculus	RefSeq	ILMN_193100	ILMN_253252	LCOR	NM_172154.4	NM_172154.4		212391	146149308	NM_172154.4	Lcor	NP_742166.1	ILMN_2650511	006020017	S	4409	GACCAGATACATGGAAGTGGACTCCTTGCCTGTAGAGCCCGCATGCTTTC				19qC3	Mus musculus ligand dependent nuclear receptor corepressor (Lcor), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	3110023F06Rik; mKIAA1795; A630025C20Rik; Mlr2	3110023F06Rik; mKIAA1795; A630025C20Rik; Mlr2
Mus musculus	RefSeq	ILMN_193100	ILMN_253252	LCOR	NM_172154.4	NM_172154.4		212391	146149308	NM_172154.4	Lcor	NP_742166.1	ILMN_2655183	005360347	S	4411	CCAGATACATGGAAGTGGACTCCTTGCCTGTAGAGCCCGCATGCTTTCCT				19qC3	Mus musculus ligand dependent nuclear receptor corepressor (Lcor), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IMP]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IPI]	3110023F06Rik; mKIAA1795; A630025C20Rik; Mlr2	3110023F06Rik; mKIAA1795; A630025C20Rik; Mlr2
Mus musculus	Riken	ILMN_207357	ILMN_207357	A630040K04RIK	ri|A630040K04|PX00660O22|AK080298|1362					AK080298	A630040K04Rik		ILMN_2586997	000270563	S	886	CAGGTGCGCTGAGCCCTCTCATATACCACCAAGCCATCTTCCTGGACTCA										
Mus musculus	RefSeq	ILMN_222479	ILMN_222479	OLFR24	NM_146606.1	NM_146606.1		18322	33238877	NM_146606.1	Olfr24	NP_666817.1	ILMN_2750099	006520148	S	606	GCAGGAATGGTGATAGCCACACCTTTTGTCTGCATCCTGGCCTCCTATGC	9	-	18559422-18559471	9qA2	Mus musculus olfactory receptor 24 (Olfr24), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR132-1; MTPCR51	MOR132-1; MTPCR51
Mus musculus	RefSeq	ILMN_193977	ILMN_239953	A930007B11RIK	XM_993574.1	XM_993574.1		77944	94401229	XM_993574.1	A930007B11Rik	XP_998668.1	ILMN_1256449	003420379	S	1281	GTGTACTTGATAAAGTATTTGGCATAGTGCCTTTTTATGTGTGTGGTGCG					PREDICTED: Mus musculus RIKEN cDNA A930007B11 gene (A930007B11Rik), mRNA.					
Mus musculus	MEEBO	ILMN_219775	ILMN_219775	SERPING1	scl19066.9.1_77				6753217	NM_009776	Serping1		ILMN_2775421	004810324	S	1515	CCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGTGTAT						The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IDA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any component or product of the complement cascade [goid 1848] [evidence IPI]		
Mus musculus	RefSeq	ILMN_221298	ILMN_221298	ABHD10	NM_172511.2	NM_172511.2		213012	31542467	NM_172511.2	Abhd10	NP_766099.2	ILMN_1231518	000510192	S	1710	CCCTAATGTCCTTTAGAGCCTTCTCTGCAGTCTACTTTCACCAGCCATGC	16	-	45730875-45730924	16qB5	Mus musculus abhydrolase domain containing 10 (Abhd10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	D630018L06; D230019K24Rik	D630018L06; D230019K24Rik
Mus musculus	MEEBO	ILMN_219711	ILMN_219711	2810455F06RIK	scl0227570.7_253	XM_130011.5			38074437	XM_130011.5	2810455F06Rik		ILMN_2712507	004850338	S	1113	CCCCGGATCTTGGCTTTTCTACGCTGCAAGGAGAATCAGGTTAAACATAG										
Mus musculus	RefSeq	ILMN_198841	ILMN_198841	LOC245589	XM_142079.2	XM_142079.2			38088974	XM_142079.2	LOC245589		ILMN_1227637	002490474	S	210	GTACGGACGTCGGGAGATTGGTGCCAAGCCCCATTGGCCCAAGTTAGAAG										
Mus musculus	RefSeq	ILMN_213186	ILMN_213186	KCTD9	NM_134073.1	NM_134073.1		105440	19527295	NM_134073.1	Kctd9	NP_598834.1	ILMN_1251465	004880019	S	2749	TCCTTCACAGTAAAGGGCTTACATGGGGAGGAGAGCACTCCTTTACAGGG	14	+	68359869-68359918	14qD1	Mus musculus potassium channel tetramerisation domain containing 9 (Kctd9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	AI854539; AA675328	AI854539; AA675328
Mus musculus	Riken	ILMN_206277	ILMN_206277	KARS-PS1	ri|E230019A18|PX00209B10|AK087592|2886					AK087592	Kars-ps1		ILMN_1255092	002260008	S	2750	CTAGAATAGGCTCGTTTGAGGGCCAGGGAGATGACTAGCAGGGAAGGCGC										
Mus musculus	MEEBO	ILMN_223080	ILMN_223080	B230208L21RIK	scl00338354.1_83	XM_355871.1			38086175	XM_355871.1	B230208L21Rik		ILMN_2759073	004560441	S	3559	AAAGTTATGGCAACAGAGTTATAATAGAAAATAAAGTCCTTGACAATATT										
Mus musculus	RefSeq	ILMN_219679	ILMN_219679	TACC2	NM_021314.4	NM_021314.4		57752	109148527	NM_021314.4	Tacc2	NP_067289.2	ILMN_2712129	005820762	S	84	TCCTTTCGGGCAGCTCCACGCGTATCGGCCACGCTCACGCACACACCTAG	7	+	137836153-137836202	7qF3	Mus musculus transforming, acidic coiled-coil containing protein 2 (Tacc2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles [goid 30953] [evidence IDA]; The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle [goid 22027] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IMP]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IMP]; Generation of cells within the nervous system [goid 22008] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IMP]; Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton [goid 32886] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISO]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [evidence ISO]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IPI]	KIAA4180; mKIAA4180	KIAA4180; mKIAA4180
Mus musculus	RefSeq	ILMN_199293	ILMN_199293	LOC331334	XM_285585.2	XM_285585.2			38093954	XM_285585.2	LOC331334		ILMN_1253034	001510427	S	554	TGGTAGCCTCCAGCCCCATAGAAGAATTCACACTGGAGAGAAACCCTAGC										
Mus musculus	RefSeq	ILMN_217528	ILMN_250869	WFDC3	NM_027961.1	NM_027961.1		71856	110625858	NM_027961.1	Wfdc3	NP_082237.1	ILMN_1229131	001570370	S	636	CACTCCCTGGAGTATCAGGCCTTTTCCTCGTATCTACTGCTACTTGCATG	2	-	164556860-164556909	2qH3	Mus musculus WAP four-disulfide core domain 3 (Wfdc3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	1700127F16Rik; 1700015L13Rik	1700127F16Rik; 1700015L13Rik
Mus musculus	RefSeq	ILMN_219581	ILMN_219581	RHBDL1	NM_144816.1	NM_144816.1		214951	21450188	NM_144816.1	Rhbdl1	NP_659065.1	ILMN_2710802	000450056	S	1274	TGTCTGCCCTATATGAATGGACCTCTCGGCTGCTTTTCCCCACAGGGGCA	17	-	25971629-25971678	17qA3.3	Mus musculus rhomboid, veinlet-like 1 (Drosophila) (Rhbdl1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	Rhbdl; MGC28800	Rhbdl; MGC28800
Mus musculus	RefSeq	ILMN_211475	ILMN_211475	PKIG	NM_011106.2	NM_011106.2		18769	86476075	NM_011106.2	Pkig	NP_035236.1	ILMN_2616262	006550600	S	51	TCTGAGTCCTGGCTTCTTGTTCTACCTTCCCATCTGACCTAGGATCCCTG	2	+	163519823-163519872	2qH3	Mus musculus protein kinase inhibitor, gamma (Pkig), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of proteins from the cytoplasm into the nucleus [goid 42308] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IDA]	PKIgamma	PKIgamma
Mus musculus	Riken	ILMN_202215	ILMN_202215	SEC8	ri|2410047K10|ZX00080I09|AK010695|1062					AK010695	Sec8		ILMN_1231593	007210133	S	793	GCCAGAGCAGATGACAGACAGGAAGGAGGAGATGAGTGGGATTGGGATGC										
Mus musculus	RefSeq	ILMN_217186	ILMN_217186	NUAK2	NM_028778.3	NM_028778.3		74137	133891701	NM_028778.3	Nuak2	NP_083054.1	ILMN_2680038	001770592	S	2766	GAGCACTGTCTGGATTGAGTCTCCAGTCCCTTCACACCCAAGGCTGGCCA	1	+	134229736-134229785	1qE4	Mus musculus NUAK family, SNF1-like kinase, 2 (Nuak2), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	1200013B22Rik; mKIAA0537; Snark	1200013B22Rik; mKIAA0537; Snark
Mus musculus	RefSeq	ILMN_197015	ILMN_197015	LOC207678	XM_136292.1	XM_136292.1			20825812	XM_136292.1	LOC207678		ILMN_1240036	007550521	S	1330	CGTTCCTCCACCCTCAAGCGACACCAGCAGATCCATTCAGGGGACAAGGA										
Mus musculus	Riken	ILMN_201851	ILMN_201851	5730543M03RIK	ri|5730543M03|PX00006M03|AK017820|1532					AK017820	5730543M03Rik		ILMN_1250779	006370753	S	1221	GGAACTACAGTCCCACACGATCTTCCGTTCTTTGCTGGCCTCCACGGGGA										
Mus musculus	RefSeq	ILMN_212344	ILMN_212344	SH3BGRL3	NM_080559.1	NM_080559.1		73723	18017601	NM_080559.1	Sh3bgrl3	NP_542126.1	ILMN_2625351	003440195	S	382	GCCACCGATCCTATCCAGCTAGCTCTTCACCAGGCCTTGTAACCAACTCC	4	-	133683596-133683645	4qD3	Mus musculus SH3 domain binding glutamic acid-rich protein-like 3 (Sh3bgrl3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			1110004L05Rik; AU022188	1110004L05Rik; AU022188
Mus musculus	RefSeq	ILMN_201218	ILMN_243319	EG546143	XM_620762.4	XM_620762.4		546143	149260072	XM_620762.4	EG546143	XP_620762.4	ILMN_1257755	004050543	S	330	CCGGCTCTGTGCGTGAACCCTGGCAACCCTGTGTTTTCCTGTATGTTGGA	9	-	72827905-72827954	9qD	PREDICTED: Mus musculus predicted gene, EG546143 (EG546143), mRNA.					
Mus musculus	Riken	ILMN_204210	ILMN_204210	9630009A08RIK	ri|9630009A08|PX00114F09|AK035833|2176					AK035833	9630009A08Rik		ILMN_1218043	001710524	S	1738	AGAGAGGCAGAGGCAGAGGCAGGTGGATGATGTCTGTGAGTTCCAGGCCA										
Mus musculus	RefSeq	ILMN_195689	ILMN_319617	OMT2A	XM_001478815.1	XM_001478815.1		18379	149260090	XM_001478815.1	Omt2a	XP_001478865.1	ILMN_2517795	000510392	S	312	GGAACCGGAGGTACTTCATTTAAGAGGACGCCTGTCCAGGACCCGTTGTT	9	-	78160027-78160054:78160055-78160076	9qE1	PREDICTED: Mus musculus oocyte maturation, alpha, transcript variant 1 (Omt2a), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]				
Mus musculus	RefSeq	ILMN_213136	ILMN_319617	OMT2A	XM_001478815.1	XM_001478815.1		18379	149260090	XM_001478815.1	Omt2a	XP_001478865.1	ILMN_2634032	005550735	S	302	CCTGTGTGGTGGAACCGGAGGTACTTCATTTAAGAGGACGCCTGTCCAGG	9	-	78160037-78160054:78160055-78160086	9qE1	PREDICTED: Mus musculus oocyte maturation, alpha, transcript variant 1 (Omt2a), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence TAS]				
Mus musculus	MEEBO	ILMN_215970	ILMN_215970	1300015D01RIK	scl074161.3_29				51712750	XM_488972	1300015D01Rik		ILMN_2665860	000270053	S	1027	GAATTGAGATGTAATTTTCTAATTAACAGTGGTTGTCAAATAAAGGGGGA										
Mus musculus	RefSeq	ILMN_208632	ILMN_208632	CHIA	NM_023186.3	NM_023186.3		81600	27754135	NM_023186.3	Chia	NP_075675.2	ILMN_2955937	003120022	S	1178	AAGGTTGCACAGCTCCTGACGTGCCTTCCGAGCCAGTGACTACTCCTCCA	3	+	105933882-105933884:105934691-105934737	3qF2.2	Mus musculus chitinase, acidic (Chia), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages [goid 272] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]; The chemical reactions and pathways involving chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6030] [evidence IEA]	Interacting selectively with chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 8061] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]	AMCase; 2200003E03Rik; YNL	AMCase; 2200003E03Rik; YNL
Mus musculus	RefSeq	ILMN_208632	ILMN_208632	CHIA	NM_023186.3	NM_023186.3		81600	27754135	NM_023186.3	Chia	NP_075675.2	ILMN_2955940	005310152	S	1397	CCAGCTGTAATTGCTGCAACTGGCCATGAACCTAATGCCATTCTTCCAGA	3	+	105934907-105934935:105934936-105934956	3qF2.2	Mus musculus chitinase, acidic (Chia), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages [goid 272] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]; The chemical reactions and pathways involving chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6030] [evidence IEA]	Interacting selectively with chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 8061] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]	AMCase; 2200003E03Rik; YNL	AMCase; 2200003E03Rik; YNL
Mus musculus	MEEBO	ILMN_193998	ILMN_193998	PIT1-RS1	scl0018737.1_3						Pit1-rs1		ILMN_2502386	004920195	S	5	CGACCATCTGCCGATTTGAAAACTTGCAGCTCAGTTTCAAAAATGCTTGC										
Mus musculus	RefSeq	ILMN_221947	ILMN_221947	FMN2	NM_019445.1	NM_019445.1		54418	9506700	NM_019445.1	Fmn2	NP_062318.1	ILMN_2829920	002360026	S	5286	CAGAACTCCACATCGATGTGGTTAGACTTGTGGGTAAACTTCGTTCCTAG	1	+	176751742-176751791	1qH3	Mus musculus formin 2 (Fmn2), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The cell cycle process whereby the directed movement of chromosomes from the center of the spindle towards the spindle poles takes place, mediated by the shortening of microtubules attached to the chromosomes. This occurs during meiosis [goid 16344] [evidence IMP]; Progression through metaphase of meiosis I; analogous to mitotic metaphase [goid 7132] [evidence IMP]; The cell cycle process whereby the directed movement of the meiotic spindle to a specific location in the cell occurs [goid 51295] [evidence IMP]; The cell cycle process whereby two small cells are generated, as byproducts destined to degenerate, as a result of the first and second meiotic divisions of a primary oocyte during its development to a mature ovum. One polar body is formed in the first division of meiosis and the other in the second division; at each division, the cytoplasm divides unequally, so that the polar body is of much smaller size than the developing oocyte. At the second division in which a polar body is formed, the polar body and the developing oocyte each contain a haploid set of chromosomes [goid 40038] [evidence IMP]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AU024104	AU024104
Mus musculus	RefSeq	ILMN_221947	ILMN_221947	FMN2	NM_019445.1	NM_019445.1		54418	9506700	NM_019445.1	Fmn2	NP_062318.1	ILMN_1217191	000430707	S	5222	GATGAGCCCTAGCCTATGGTTTCTCTCTTGTTGCAACAAAAATATTTTCC	1	+	176751678-176751727	1qH3	Mus musculus formin 2 (Fmn2), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The cell cycle process whereby the directed movement of chromosomes from the center of the spindle towards the spindle poles takes place, mediated by the shortening of microtubules attached to the chromosomes. This occurs during meiosis [goid 16344] [evidence IMP]; Progression through metaphase of meiosis I; analogous to mitotic metaphase [goid 7132] [evidence IMP]; The cell cycle process whereby the directed movement of the meiotic spindle to a specific location in the cell occurs [goid 51295] [evidence IMP]; The cell cycle process whereby two small cells are generated, as byproducts destined to degenerate, as a result of the first and second meiotic divisions of a primary oocyte during its development to a mature ovum. One polar body is formed in the first division of meiosis and the other in the second division; at each division, the cytoplasm divides unequally, so that the polar body is of much smaller size than the developing oocyte. At the second division in which a polar body is formed, the polar body and the developing oocyte each contain a haploid set of chromosomes [goid 40038] [evidence IMP]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AU024104	AU024104
Mus musculus	MEEBO	ILMN_217152	ILMN_217152	SSSCA1	scl0056390.1_292				31543772	NM_020491	Sssca1		ILMN_2691492	004560730	S	586	GCCCTAGGCAGCCTGAAACAGCTGGATCACTGAGACCTCTATCCTGATCC						The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]		
Mus musculus	RefSeq	ILMN_215282	ILMN_215282	STX2	NM_007941.1	NM_007941.1		13852	6679666	NM_007941.1	Stx2	NP_031967.1	ILMN_2657575	004920301	S	971	GCTGTCATTGCCGTCCTGGCTCTAATCATTGGCTTGTCGGTTGGCAAATG	5	-	129493637-129493686	5qG1.3	Mus musculus syntaxin 2 (Stx2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IDA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IC ]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IPI]	MGC54718; Epim; AW538950	MGC54718; Epim; AW538950
Mus musculus	RefSeq	ILMN_197710	ILMN_230966	LOC671947	XM_990085.1	XM_990085.1		671947	94399595	XM_990085.1	LOC671947	XP_995179.1	ILMN_1260186	002650546	S	525	GCTAGCCAGTGCAGCCATGACAGAAGACACACCACAGCTAGCCAGTGCAG					PREDICTED: Mus musculus similar to T23E7.2a (LOC671947), mRNA.					
Mus musculus	RefSeq	ILMN_222784	ILMN_253784	RNASE10	NM_029145.2	NM_029145.2		75019	142362945	NM_029145.2	Rnase10	NP_083421.1	ILMN_2754737	000060017	S	856	TCCTTGGGTTTGCTAACTATAGAGAAGATCCTGGGAGGAGAGAATGGACC	14	+	51629659-51629708	14qC1	Mus musculus ribonuclease, RNase A family, 10 (non-active) (Rnase10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	4930474F22Rik	4930474F22Rik
Mus musculus	RefSeq	ILMN_201181	ILMN_201181	LOC385032	XM_358005.1	XM_358005.1			38089646	XM_358005.1	LOC385032		ILMN_2541380	007320619	S	241	CAGTGTGAGGCCGTGTCTAAGGTTACCCATGCTCTGCAGTGTGGGGCCAT										
Mus musculus	RefSeq	ILMN_215493	ILMN_215493	NGFB	NM_013609.1	NM_013609.1		18049	7305312	NM_013609.1	Ngfb	NP_038637.1	ILMN_2937596	000150523	S	744	CCACAGACATCAAGGGCAAGGAGGTGACAGTGCTGGCCGAGGTGAACATT	3	+	102324491-102324540	3qF2.2	Mus musculus nerve growth factor, beta (Ngfb), mRNA.					
Mus musculus	RefSeq	ILMN_215493	ILMN_215493	NGFB	NM_013609.1	NM_013609.1		18049	7305312	NM_013609.1	Ngfb	NP_038637.1	ILMN_2660233	006940176	S	608	GACTTCCAGGCCCATGGTACAATCCCTTTCAACAGGACTCACCGGAGCAA	3	+	102324355-102324404	3qF2.2	Mus musculus nerve growth factor, beta (Ngfb), mRNA.					
Mus musculus	RefSeq	ILMN_199677	ILMN_199677	LOC382867	XM_356719.1	XM_356719.1			38075956	XM_356719.1	LOC382867		ILMN_1213099	003440241	S	651	ACCATGGCTGGAGCATACCCAGGTACAAGCCCCCACATCCTCAGCTCCTT										
Mus musculus	Riken	ILMN_204794	ILMN_204794	4931436F15RIK	ri|4931436F15|PX00016N20|AK029910|1955					AK029910	4931436F15Rik		ILMN_2567657	001260291	S	1833	CAGCAGCATGGGAAATGCAAACAACAAGGAAAGGCTTTATGCTGGCCTGC										
Mus musculus	RefSeq	ILMN_246924	ILMN_246924	CALCA	NM_001033954.1	NM_001033954.1		12310	76880462	NM_001033954.1	Calca	NP_001029126.1	ILMN_3101815	006580452	A	166	GCCTTTGAGGTCAATCTTGGAAAGCAGCCCAGGCATGGCCACTCTCAGTG	7	-	114425716-114425757:114426276-114426283	7qF1	Mus musculus calcitonin/calcitonin-related polypeptide, alpha (Calca), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of a neurophysiological process [goid 31645] [evidence IMP]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; The regulation of blood pressure mediated by detection of stimuli and a neurological response [goid 1976] [evidence ISA]; An increase in the internal diameter of an artery, triggered by vasomotor suppression, during the chemoreceptor response to decreased blood pressure [goid 1984] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IDA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence ISA]; Behavior associated with the intake of food [goid 7631] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle contraction [goid 45986] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence ISA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence ISA]	Interacting selectively with a calcitonin receptor [goid 31716] [evidence IDA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]	Calc1; Cgrp; CGRP-1; CA; CGRP1; Calc; Ct; calcitonin; Ctn	Calc1; Cgrp; CGRP-1; CA; CGRP1; Calc; Ct; calcitonin; Ctn
Mus musculus	RefSeq	ILMN_246924	ILMN_246924	CALCA	NM_001033954.1	NM_001033954.1		12310	76880462	NM_001033954.1	Calca	NP_001029126.1	ILMN_3028637	006650017	I	777	ACCTCAAGGGGATATGAAACACTGCCTCTTGCTCTTCTGGGGACACATGG	7	-	114422727-114422776	7qF1	Mus musculus calcitonin/calcitonin-related polypeptide, alpha (Calca), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISO]	Any process that stops, prevents or reduces the frequency, rate or extent of a neurophysiological process [goid 31645] [evidence IMP]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IMP]; The regulation of blood pressure mediated by detection of stimuli and a neurological response [goid 1976] [evidence ISA]; An increase in the internal diameter of an artery, triggered by vasomotor suppression, during the chemoreceptor response to decreased blood pressure [goid 1984] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IMP]; The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IGI]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IDA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence IMP]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence ISA]; Behavior associated with the intake of food [goid 7631] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IDA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle contraction [goid 45986] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IGI]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [evidence ISA]; A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium [goid 48240] [evidence ISA]	Interacting selectively with a calcitonin receptor [goid 31716] [evidence IDA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IDA]	Calc1; Cgrp; CGRP-1; CA; CGRP1; Calc; Ct; calcitonin; Ctn	Calc1; Cgrp; CGRP-1; CA; CGRP1; Calc; Ct; calcitonin; Ctn
Mus musculus	RefSeq	ILMN_219299	ILMN_224672	WDR53	NM_026898.1	NM_026898.1		68980	58037134	NM_026898.1	Wdr53	NP_081174.1	ILMN_2706964	005310341	S	1126	AAAGAGGGCAGCGTGCCCCACGCAGGGTGGAAACTCCAGAGCCCCAGGAG	16	+	32256934-32256983	16qB2	Mus musculus WD repeat domain 53 (Wdr53), mRNA.				AI848860; 1500002B03Rik	AI848860; 1500002B03Rik
Mus musculus	RefSeq	ILMN_257190	ILMN_257190	KRTAP5-5	NM_001037822.1	NM_001037822.1		114666	83715995	NM_001037822.1	Krtap5-5	NP_001032911.1	ILMN_3007540	001570242	S	904	CTCCAGACTGAGGGGGTGAGTCCTGGGGTGGAGAAAAACTCCTCTTGCTG	7	-	149414923-149414972	7qF5	Mus musculus keratin associated protein 5-5 (Krtap5-5), mRNA. XM_925516	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			AI586182; MGC130543; BB149782; A030001H12Rik	AI586182; MGC130543; BB149782; A030001H12Rik
Mus musculus	Riken	ILMN_204896	ILMN_204896	OXR1	ri|A530033P13|PX00140N10|AK040881|2763					AK040881	Oxr1		ILMN_2568447	005340600	S	2375	CAGTGTCCAAGCTAATACTGAGAAGTGCTTTTCAAAGCCCCCTATAGATA						A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Mus musculus	RefSeq	ILMN_223287	ILMN_249381	ELK1	NM_007922.4	NM_007922.4		13712	116292181	NM_007922.4	Elk1	NP_031948.4	ILMN_2761985	003170091	S	1574	GACAGACTTAAGCTCTGATTGTGGTGGGGTGGATATTCCTGGAAAAGTGA	X	-	20512437-20512486	XqA1.3	Mus musculus ELK1, member of ETS oncogene family (Elk1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Elk-1	Elk-1
Mus musculus	RefSeq	ILMN_197035	ILMN_250730	EG432681	XM_484165.5	XM_484165.5		432681	149263473	XM_484165.5	EG432681	XP_484165.1	ILMN_1218976	006560079	S	95	GAATGGCCGTTCTGCCATCAGCGAGGTGGTGACCCGAGAATACACCATCA	12	-	93129631-93129680	12qD3	PREDICTED: Mus musculus predicted gene, EG432681 (EG432681), mRNA.					
Mus musculus	RefSeq	ILMN_185274	ILMN_244665	6230409E13RIK	NM_175234.3	NM_175234.3		76132	142345465	NM_175234.3	6230409E13Rik	NP_780443.1	ILMN_1228753	001740632	S	755	TAAATAAAAGCCTCGGCCCCCATGAAAGAGCCGTCTCAAGAGCCGTGACC	4	+	21875960-21876009	4qA3	Mus musculus RIKEN cDNA 6230409E13 gene (6230409E13Rik), mRNA.			Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	RefSeq	ILMN_196990	ILMN_311839	GM101	XR_032988.1	XR_032988.1		226356	149240752	XR_032988.1	Gm101		ILMN_2526513	003130452	S	2152	CTGTGATCAGGGCATAGAAGTCATGCTGACGCCAGAAATGGTCCAAGTGG				1qE2.3	PREDICTED: Mus musculus gene model 101, (NCBI) (Gm101), misc RNA.					
Mus musculus	RefSeq	ILMN_216177	ILMN_314340	LOC100044222	XM_001471678.1	XM_001471678.1		100044222	149252898	XM_001471678.1	LOC100044222	XP_001471728.1	ILMN_1223207	005050402	S	3461	CCTGCCCAGCCACTGTAGCCTGGAACTTAACCTCTTAGCTGACCTTTACC					PREDICTED: Mus musculus hypothetical protein LOC100044222 (LOC100044222), mRNA.					
Mus musculus	RefSeq	ILMN_200889	ILMN_200889	LOC381895	XM_358674.1	XM_358674.1			38086859	XM_358674.1	LOC381895		ILMN_1215999	002190279	S	311	CTCGGTCATCTCCACACGCTATCTGGCAATCACGGTTCTCAGCCATCGGC										
Mus musculus	RefSeq	ILMN_216953	ILMN_216953	TCP1	NM_013686.3	NM_013686.3		21454	141802409	NM_013686.3	Tcp1	NP_038714.2	ILMN_2677386	005420068	S	1265	GGAGCGCTCTTTACATGATGCTCTTTGTGTGGTGAAGAGAGTTTTGGAGT	17	+	13116150-13116199	17qA1	Mus musculus t-complex protein 1 (Tcp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IDA]; A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	p63; Tcp-1; Ccta; TRic; Tp63; c-cpn; CCT; Cct1; AI528772	p63; Tcp-1; Ccta; TRic; Tp63; c-cpn; CCT; Cct1; AI528772
Mus musculus	RefSeq	ILMN_216953	ILMN_216953	TCP1	NM_013686.3	NM_013686.3		21454	141802409	NM_013686.3	Tcp1	NP_038714.2	ILMN_2774140	005820672	S	195	GTTAAAAGTTCTTTTGGGCCAGTTGGCTTGGATAAAATGTTGGTGGATGA	17	+	13110693-13110742	17qA1	Mus musculus t-complex protein 1 (Tcp1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IDA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IDA]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IDA]; A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	p63; Tcp-1; Ccta; TRic; Tp63; c-cpn; CCT; Cct1; AI528772	p63; Tcp-1; Ccta; TRic; Tp63; c-cpn; CCT; Cct1; AI528772
Mus musculus	RefSeq	ILMN_213090	ILMN_213090	CHEK2	NM_016681.3	NM_016681.3		50883	142377787	NM_016681.3	Chek2	NP_057890.1	ILMN_2633492	003360400	S	1532	AATTTCAGGATCTCCTGGTGCAGGAAAAGAACTCGGTGACCCTCCCTGTG	5	+	111301065-111301114	5qF	Mus musculus CHK2 checkpoint homolog (S. pombe) (Chek2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A cascade of processes induced by the detection of DNA damage within a cell [goid 42770] [evidence IDA]; A cascade of processes induced by the detection of DNA damage within a cell [goid 42770] [evidence ISO]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	CHK2; Rad53; HUCDS1; Cds1	CHK2; Rad53; HUCDS1; Cds1
Mus musculus	RefSeq	ILMN_213090	ILMN_213090	CHEK2	NM_016681.3	NM_016681.3		50883	142377787	NM_016681.3	Chek2	NP_057890.1	ILMN_1247062	006840692	S	1062	CCTTCACGAAAATGGGATCATACATCGGGACTTAAAGCCGGAGAATGTTC	5	+	111294543-111294592	5qF	Mus musculus CHK2 checkpoint homolog (S. pombe) (Chek2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A cascade of processes induced by the detection of DNA damage within a cell [goid 42770] [evidence IDA]; A cascade of processes induced by the detection of DNA damage within a cell [goid 42770] [evidence ISO]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]	CHK2; Rad53; HUCDS1; Cds1	CHK2; Rad53; HUCDS1; Cds1
Mus musculus	RefSeq	ILMN_185624	ILMN_310774	1600023N17RIK	XM_001477104.1	XM_001477104.1		69788	149253712	XM_001477104.1	1600023N17Rik	XP_001477154.1	ILMN_2428612	006180138	S	627	AGAGGGCTGCCTCCAGACTATGTTGTTCTGTAGGTACTCTGGGAATCCCT				5qB3	PREDICTED: Mus musculus RIKEN cDNA 1600023N17 gene (1600023N17Rik), mRNA.					
Mus musculus	RefSeq	ILMN_247758	ILMN_247758	GM817	NM_001033408.1	NM_001033408.1		329207	85701904	NM_001033408.1	Gm817	NP_001028580.1	ILMN_2964378	001500327	S	3619	TGCAGTGTGAGAGGTCACCATGTTCCGGCCTGGGGTTTGCTATGTTCTGT	1	+	93000969-93001018	1qD	Mus musculus gene model 817, (NCBI) (Gm817), mRNA.					
Mus musculus	RefSeq	ILMN_239690	ILMN_239690	MFRP	NM_147126.2	NM_147126.2		259172	95147557	NM_147126.2	Mfrp	NP_667337.1	ILMN_2964129	006200097	S	2922	CACCCCATCACACAGTGCTCAACCCCAAAGGCATGTTTGTAGGGCGGGGA	9	+	43915666-43915715	9qA5.1	Mus musculus membrane-type frizzled-related protein (Mfrp), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IMP]		rd6	rd6
Mus musculus	RefSeq	ILMN_201255	ILMN_201255	LOC384985	XM_357972.1	XM_357972.1			38090184	XM_357972.1	LOC384985		ILMN_2541647	001260474	S	407	TGCTGGCTGATGCCCAGCAGGGCCGCCAGGCTCTCCAGAAAGTTTTCTCT										
Mus musculus	RefSeq	ILMN_222960	ILMN_222960	CYP4V3	NM_133969.2	NM_133969.2		102294	118129905	NM_133969.2	Cyp4v3	NP_598730.1	ILMN_1251504	002320307	S	2763	GATCGCACTTGGTTCAGCCCGAGACATCTAATTAACCCAGCCCCATGGAG	8	-	46391273-46391322	8qB1.1	Mus musculus cytochrome P450, family 4, subfamily v, polypeptide 3 (Cyp4v3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	AU043077; AW111961	AU043077; AW111961
Mus musculus	MEEBO	ILMN_194712	ILMN_194712	TPST2	scl27412.8.1_4				31981951	NM_009419	Tpst2		ILMN_2508910	001410717	S	17	TAACGGACAGACCCCTTGGTGACCTCATCTCCTGGGACAAGACCGGAGAC						A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + protein tyrosine = adenosine 3',5'-bisphosphate + protein tyrosine-O-sulfate [goid 8476] [evidence IEA]		
Mus musculus	RefSeq	ILMN_215194	ILMN_215194	FTCD	NM_080845.1	NM_080845.1		14317	18252783	NM_080845.1	Ftcd	NP_543121.1	ILMN_1226455	004250047	S	409	CTCAGACGCCCAGTCGTCAGACCCTGCCAGCCATCCGGGCTGGAGAGTAT	10	+	76037567-76037616	10qC1	Mus musculus formiminotransferase cyclodeaminase (Ftcd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The chemical reactions and pathways involving histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6547] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence TAS]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Catalysis of the reaction: 5-formimidoyltetrahydrofolate = 5,10-methenyltetrahydrofolate + NH3 [goid 30412] [evidence TAS]; Catalysis of the reaction: 5-formimidoyltetrahydrofolate + L-glutamate = tetrahydrofolate + N-formimidoyl-L-glutamate [goid 30409] [evidence TAS]		
Mus musculus	RefSeq	ILMN_215194	ILMN_215194	FTCD	NM_080845.1	NM_080845.1		14317	18252783	NM_080845.1	Ftcd	NP_543121.1	ILMN_1216722	002120167	S	1842	GTGGTATCCTGATACCCTCTGTTATCCATGGTTTCTGGTAAATTCTGAAC	10	+	76042820-76042869	10qC1	Mus musculus formiminotransferase cyclodeaminase (Ftcd), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The chemical reactions and pathways involving histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6547] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence TAS]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Catalysis of the reaction: 5-formimidoyltetrahydrofolate = 5,10-methenyltetrahydrofolate + NH3 [goid 30412] [evidence TAS]; Catalysis of the reaction: 5-formimidoyltetrahydrofolate + L-glutamate = tetrahydrofolate + N-formimidoyl-L-glutamate [goid 30409] [evidence TAS]		
Mus musculus	Riken	ILMN_203932	ILMN_203932	A130062E24RIK	ri|A130062E24|PX00124G11|AK037912|3355					AK037912	A130062E24Rik		ILMN_2561088	003460554	S	3083	GGCCTTTGAGTCTATAGCTACAGCTGAGTGCCCTGAGTGTCTCAAAAACG										
Mus musculus	RefSeq	ILMN_212206	ILMN_212206	1110001J03RIK	NM_025363.2	NM_025363.2		66117	27228964	NM_025363.2	1110001J03Rik	NP_079639.1	ILMN_2958076	004120017	S	331	TGGAGGGAAGGGCTGGGAGCCGTGATGCAGAGAGTCCTCAGATGTTCCTT	6	+	38468947-38468970:38468971-38468996	6qB1	Mus musculus RIKEN cDNA 1110001J03 gene (1110001J03Rik), mRNA.					
Mus musculus	RefSeq	ILMN_196692	ILMN_320075	LOC100043544	XM_001480879.1	XM_001480879.1		100043544	149262001	XM_001480879.1	LOC100043544	XP_001480929.1	ILMN_1241998	007510685	S	379	CGTCTACGATACCTGCATCACTTCCAGGTCCACCCGTTCTTTCGGGGTGT	11	+	78108119-78108168	11qB5	PREDICTED: Mus musculus hypothetical protein LOC100043544, transcript variant 1 (LOC100043544), mRNA.					
Mus musculus	RefSeq	ILMN_245166	ILMN_245166	TCEA2	NM_009326.1	NM_009326.1		21400	6678234	NM_009326.1	Tcea2	NP_033352.1	ILMN_2884728	003310315	S	1047	GTTCTTGGTGGACACAGCTTCTCTGGAGATACCCTGAAGGTGGCACGCCC	2	+	181617341-181617390	2qH4	Mus musculus transcription elongation factor A (SII), 2 (Tcea2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	SII-T1; Tceat; AI326274; S-II-T1	SII-T1; Tceat; AI326274; S-II-T1
Mus musculus	RefSeq	ILMN_216125	ILMN_216125	FTL2	NM_008049.1	NM_008049.1		14337	6679872	NM_008049.1	Ftl2	NP_032075.1	ILMN_1256451	004480187	S	38	GTCCCCTCATTCACATCACCAAGGATGATGACAGTCTCTCCAGTCGCCGC	7	-	45327689-45327738	4qD2.2	Mus musculus ferritin light chain 2 (Ftl2), mRNA.		The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Ftl; Ftl-2	Ftl; Ftl-2
Mus musculus	RefSeq	ILMN_216125	ILMN_216125	FTL2	NM_008049.1	NM_008049.1		14337	6679872	NM_008049.1	Ftl2	NP_032075.1	ILMN_2667626	002850372	S	38	TCCCCTCATTCACATCACCAAGGATGATGACAGTCTCTCCAGTCGCCGCA	7	-	45327689-45327738	4qD2.2	Mus musculus ferritin light chain 2 (Ftl2), mRNA.		The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Ftl; Ftl-2	Ftl; Ftl-2
Mus musculus	RefSeq	ILMN_209612	ILMN_242001	EG632832	XM_976845.1	XM_976845.1		632832	94395752	XM_976845.1	EG632832	XP_981939.1	ILMN_1238263	006510440	S	70	CAAGCAATCATTGTCAATGACAAAGTGACTATTGAAGTTATAATTGTATT				13qD2.2	PREDICTED: Mus musculus predicted gene, EG632832 (EG632832), mRNA.					
Mus musculus	RefSeq	ILMN_229393	ILMN_229393	PRPH	NM_013639.1	NM_013639.1		19132	7305412	NM_013639.1	Prph	NP_038667.1	ILMN_2952521	000770484	S	809	GGGACATCCGTGCACAGTACGAGAACATCGCGGCAAAGAATCTGCAGGAG	15	+	98887294-98887343	15qF1	Mus musculus peripherin (Prph), mRNA.	A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter [goid 5883] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Prph1	Prph1
Mus musculus	RefSeq	ILMN_185007	ILMN_229393	PRPH	NM_013639.1	NM_013639.1		19132	7305412	NM_013639.1	Prph	NP_038667.1	ILMN_2723622	004050010	S	1351	GCCTCTCTAAGTTTAAAGACGACTGTGCCTGAGATGGAGCCTCTCCAGGA	15	+	98888024-98888048:98888247-98888271	15qF1	Mus musculus peripherin (Prph), mRNA.	A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter [goid 5883] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Prph1	Prph1
Mus musculus	Riken	ILMN_205519	ILMN_205519	D130049J17RIK	ri|D130049J17|PX00184L10|AK051450|1845					AK051450	D130049J17Rik		ILMN_1219211	004050139	S	1541	TGCAATGGTCCAGGCAGGAGGCGGCGGTAACTTAGACTAGGGTGGTAACA										
Mus musculus	RefSeq	ILMN_191067	ILMN_225524	SHOX2	NM_013665.1	NM_013665.1		20429	7305488	NM_013665.1	Shox2	NP_038693.1	ILMN_2647121	003360092	S	1463	GAGCGGGTTTGGGGAAGTCTGGATAGAGACTGGACAAAGGAGTGTGGCCA	3	-	66777270-66777319	3qE1	Mus musculus short stature homeobox 2 (Shox2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process by which the anatomical structures of skeletal joints are generated and organized during the embryonic phase. A joint is the connecting structure between the bones of the skeleton. Morphogenesis pertains to the creation of form [goid 60272] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Og12x; 6330543G17Rik; Prx3; SHOT; OG12	Og12x; 6330543G17Rik; Prx3; SHOT; OG12
Mus musculus	RefSeq	ILMN_191067	ILMN_225524	SHOX2	NM_013665.1	NM_013665.1		20429	7305488	NM_013665.1	Shox2	NP_038693.1	ILMN_1226318	006380646	S	282	ATCACGTACCGGGAGGTGCTAGAGAGCGGGCCGCTGCGCGGGGCCAAAGA	3	-	66785362-66785411	3qE1	Mus musculus short stature homeobox 2 (Shox2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process by which the anatomical structures of skeletal joints are generated and organized during the embryonic phase. A joint is the connecting structure between the bones of the skeleton. Morphogenesis pertains to the creation of form [goid 60272] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Og12x; 6330543G17Rik; Prx3; SHOT; OG12	Og12x; 6330543G17Rik; Prx3; SHOT; OG12
Mus musculus	RefSeq	ILMN_225524	ILMN_225524	SHOX2	NM_013665.1	NM_013665.1		20429	7305488	NM_013665.1	Shox2	NP_038693.1	ILMN_2997975	004780288	S	840	GGAGCCGCTAGCCAGTTTGAAGCTTGTAGAGTTGCACCCTATGTCAACGT	3	-	66779393-66779442	3qE1	Mus musculus short stature homeobox 2 (Shox2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IMP]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IMP]; The process by which the anatomical structures of skeletal joints are generated and organized during the embryonic phase. A joint is the connecting structure between the bones of the skeleton. Morphogenesis pertains to the creation of form [goid 60272] [evidence IMP]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Og12x; 6330543G17Rik; Prx3; SHOT; OG12	Og12x; 6330543G17Rik; Prx3; SHOT; OG12
Mus musculus	RefSeq	ILMN_230550	ILMN_230550	OLFR1031	NM_001011759.1	NM_001011759.1		257916	58801305	NM_001011759.1	Olfr1031	NP_001011759.1	ILMN_3160975	002970288	S	436	GTGCCTTATGTGTATGGGGCACTTACTGGTCTGATGGAGACCATGTGGAC	2	+	85832411-85832460	2qD	Mus musculus olfactory receptor 1031 (Olfr1031), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR200-1	MOR200-1
Mus musculus	RefSeq	ILMN_215731	ILMN_246698	DBNDD2	NM_001048228.1	NM_001048228.1		52840	115299766	NM_001048228.1	Dbndd2	NP_001041693.1	ILMN_1249905	006960026	S	944	GAGGGGATGTTCTGAGGAGTTCCACTTTCCAGTTATCCTGCCTCTATAAG	2	+	164316166-164316215	2qH3	Mus musculus dysbindin (dystrobrevin binding protein 1) domain containing 2 (Dbndd2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	2900022J10Rik; R74724; AU041050; AW048677; D2Bwg0891e; RP23-140D14.3; 1110017A21Rik	2900022J10Rik; R74724; AU041050; AW048677; D2Bwg0891e; RP23-140D14.3; 1110017A21Rik
Mus musculus	RefSeq	ILMN_198958	ILMN_254554	1110001D15RIK	NM_026763.1	NM_026763.1		68553	124286815	NM_026763.1	1110001D15Rik	NP_081039.1	ILMN_1239014	003310136	S	149	CTGGAGAAGATTGTCACATACCCTCCCTGGAAGCACGCCATCCGCCTAGA	9	-	105974369-105974418	9qF1	Mus musculus RIKEN cDNA 1110001D15 gene (1110001D15Rik), mRNA. XM_974301 XM_979488	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Col6a4; AI413310	Col6a4; AI413310
Mus musculus	MEEBO	ILMN_195368	ILMN_195368	PHF3	scl16903.16_97				51704907	XM_129836	Phf3		ILMN_2514967	003610204	S	18	AGTAGCTGCCAGATGATGCTAACACTCGAGACCCCACTCAAGAGCGATCA								Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Mus musculus	RefSeq	ILMN_237154	ILMN_237154	CD80	NM_009855.2	NM_009855.2		12519	111038144	NM_009855.2	Cd80	NP_033985.3	ILMN_2877958	000650349	S	995	GCTCTTTGGGGCAGGATTCGGCGCAGTAATAACAGTCGTCGTCATCGTTG	16	+	38482739-38482788	16qB4	Mus musculus CD80 antigen (Cd80), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IDA]	The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Cd28l; B7.1; MIC17; TS/A-1; Ly-53; B7-1; Ly53	Cd28l; B7.1; MIC17; TS/A-1; Ly-53; B7-1; Ly53
Mus musculus	RefSeq	ILMN_197109	ILMN_312220	LOC623121	XM_001480713.1	XM_001480713.1		623121	149241469	XM_001480713.1	LOC623121	XP_001480763.1	ILMN_2526938	004730246	S	20	GTCTGAGCAGCTGAGCAGTGACTCTACCCAGTGTCAGCTTTCCATCTCTC				1qH3	PREDICTED: Mus musculus similar to Interferon-activatable protein 203 (Ifi-203) (Interferon-inducible protein p203) (LOC623121), mRNA.					
Mus musculus	RefSeq	ILMN_203731	ILMN_312220	LOC623121	XM_001480713.1	XM_001480713.1		623121	149241469	XM_001480713.1	LOC623121	XP_001480763.1	ILMN_1219896	001090647	S	2744	AATTGTGACTAGGGTGTGAAATCCTCACCTGGCTCCTGTCAATAGCTGCC				1qH3	PREDICTED: Mus musculus similar to Interferon-activatable protein 203 (Ifi-203) (Interferon-inducible protein p203) (LOC623121), mRNA.					
Mus musculus	MEEBO	ILMN_195454	ILMN_195454	A230074L19RIK	scl0319585.5_49						A230074L19Rik		ILMN_2515695	006620719	S	2	TAGGGACTCGGGCTACAAGAGTAGGGGCTCCGGGCATGGACGTTTCGGGG										
Mus musculus	Riken	ILMN_205233	ILMN_205233	2310079F23RIK	ri|E130309C02|PX00209K20|AK053800|2194					AK053800	2310079F23Rik		ILMN_1214672	001190209	S	1993	GCTAGCGGCGTGTCCGTGGTCCCCTCATTTAACAAGTGATTAACCAATGC								Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Mus musculus	MEEBO	ILMN_191172	ILMN_191172	SULT2A1	scl0020859.1_155						Sult2a1		ILMN_2476781	003370240	S	19	CTCATGAGAAAAGGCACAATTGGGGACTGGAAGAATCACTTCACAGTAGC						All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + taurolithocholate = adenosine 3',5'-bisphosphate + taurolithocholate sulfate [goid 47704] [evidence IEA]		
Mus musculus	RefSeq	ILMN_200732	ILMN_200732	GM1079	XM_355841.5	XM_355841.5		381836	94379325	XM_355841.5	Gm1079	XP_355841.4	ILMN_2539806	003170377	S	1057	CTGAGGAATTGGCAACGGAGCTGAGAGAAGATGGGTGGAGAGGAGGGCAG	7	-	4908715-4908764	7qA1	PREDICTED: Mus musculus gene model 1079, (NCBI) (Gm1079), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]		
Mus musculus	RefSeq	ILMN_217332	ILMN_240133	CYLC1	NM_026134.2	NM_026134.2		67407	125630302	NM_026134.2	Cylc1	NP_080410.2	ILMN_2681992	000670037	S	774	GTGTTGAAGAATTTTCTGATGACATATCAGAGTGTATAAACAGCTCAAAT	X	+	108318024-108318073	XqE1	Mus musculus cylicin, basic protein of sperm head cytoskeleton 1 (Cylc1), mRNA.	A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction [goid 43159] [evidence ISO]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	4930401M13Rik	4930401M13Rik
Mus musculus	RefSeq	ILMN_189319	ILMN_225967	PTCH1	NM_008957.2	NM_008957.2		19206	118130558	NM_008957.2	Ptch1	NP_032983.1	ILMN_1248463	000150040	S	4212	TGTCAGGTGTGAGAGGAGGGACTCAAAGGTGGAGGTCATAGAGCTACAGG	13	-	63612884-63612933	13qB3	Mus musculus patched homolog 1 (Ptch1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence TAS]	The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IMP]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IMP]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IGI]; Any process that modulates the frequency, rate or extent of smoothened signaling [goid 8589] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IGI]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IMP]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IMP]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence TAS]	A230106A15Rik; Ptc; mes; Ptc1; Ptch	A230106A15Rik; Ptc; mes; Ptc1; Ptch
Mus musculus	RefSeq	ILMN_222147	ILMN_222147	RNPC3	NM_026043.3	NM_026043.3		67225	84662759	NM_026043.3	Rnpc3	NP_080319.2	ILMN_2745318	002750315	S	1533	GCGTTGAAAGAAGCTAATGGCTATGTTCTTTTTGGAAAACCCATGGTGGT	3	-	113311956-113312005	3qF3	Mus musculus RNA-binding region (RNP1, RRM) containing 3 (Rnpc3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C030014B17Rik; AI447568; 2810441O16Rik	C030014B17Rik; AI447568; 2810441O16Rik
Mus musculus	RefSeq	ILMN_191110	ILMN_225010	BEND7	NM_178663.3	NM_178663.3		209645	141803215	NM_178663.3	Bend7	NP_848778.1	ILMN_2590042	006550070	S	1850	ACCCGGACAGACATTTGGAACTGGAGAAGTACAAGCGATGTAAGAATCCT	2	+	4721519-4721568	2qA1	Mus musculus BEN domain containing 7 (Bend7), mRNA.				1110017O21Rik; RP23-198G1.1	1110017O21Rik; RP23-198G1.1
Mus musculus	RefSeq	ILMN_201580	ILMN_311023	RAPGEF2	NM_001099624.1	NM_001099624.1		76089	151301002	NM_001099624.1	Rapgef2	NP_001093094.1	ILMN_2596932	000010709	S	5792	TGGGGACGCTGCATATGGAGAAGGCCAAGTGTAGCGCCCGTCTGCTCATA				3qE3	Mus musculus Rap guanine nucleotide exchange factor (GEF) 2 (Rapgef2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	mKIAA0313; 5830453M24Rik; Pdzgef1	mKIAA0313; 5830453M24Rik; Pdzgef1
Mus musculus	Riken	ILMN_207034	ILMN_207034	5730470C09RIK	ri|C530020I04|PX00669C09|AK082951|1072					AK082951	5730470C09Rik		ILMN_1259924	001300450	S	822	GCTTTCAAGGGGATGTGTCGAGTGGTGTAGCTCTGTGGCAGAACCTGGCC										
Mus musculus	RefSeq	ILMN_245838	ILMN_245838	EG619517	NM_001038500.1	NM_001038500.1		619517	84370325	NM_001038500.1	EG619517	NP_001033589.1	ILMN_3161172	004180296	S	716	GCCATAGGCAGCAAAGTATGTGTTCTGAACCAGATGTGAAAGCAGCAGGC	17	+	40868370-40868419	17qB2	Mus musculus predicted gene, EG619517 (EG619517), mRNA.				Esp1	Esp1
Mus musculus	RefSeq	ILMN_221058	ILMN_221058	MYCBPAP	NM_170671.1	NM_170671.1		104601	24762233	NM_170671.1	Mycbpap	NP_733771.1	ILMN_2820831	004640292	S	2109	CGCTGAGGTCTATGCGTTGCTGGACAACCTGGTGACAGATGTGATGGTCC	11	-	94362791-94362834:94364440-94364445	11qD	Mus musculus Mycbp associated protein (Mycbpap), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISO]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISA]	4932408B01Rik; AW125474; AMAP-1	4932408B01Rik; AW125474; AMAP-1
Mus musculus	RefSeq	ILMN_199467	ILMN_199467	LOC383517	XM_357103.1	XM_357103.1			38049596	XM_357103.1	LOC383517		ILMN_1242725	002940452	S	244	CTCTGGACAAACCTCCACAGGATTCAAGTTGGACAGAAGGCGGCAAGCAC										
Mus musculus	RefSeq	ILMN_210444	ILMN_210444	C1S	NM_144938.1	NM_144938.1		50908	21450096	NM_144938.1	C1s	NP_659187.1	ILMN_2667269	000870431	S	1056	ACCTAATGGGGCAAAAGAAGGGTTGGAAGCTTCGTTACCATGGAGATCCC	6	-	124485256-124485305	6qF2	Mus musculus complement component 1, s subcomponent (C1s), mRNA.		Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC132830; C1sa; AI255193; MGC37773; AA959438; AI327365	MGC132830; C1sa; AI255193; MGC37773; AA959438; AI327365
Mus musculus	RefSeq	ILMN_185843	ILMN_231862	WDFY2	NM_175546.3	NM_175546.3		268752	142348899	NM_175546.3	Wdfy2	NP_780755.1	ILMN_2484506	001090494	S	1376	GGGGATGGTTACTGACTTCTGGAACTGACAAGGTAATTAAGCTGTGGGAC	14	+	63573766-63573806:63575117-63575125	14qD1	Mus musculus WD repeat and FYVE domain containing 2 (Wdfy2), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZFYVE22; MGC141241; 5830485M08; B130024L21Rik	ZFYVE22; MGC141241; 5830485M08; B130024L21Rik
Mus musculus	MEEBO	ILMN_194496	ILMN_194496	IGHV1S113_L33954_IG_HEAVY_VARIABLE_1S113_110	IGHV1S113_L33954_Ig_heavy_variable_1S113_110						IGHV1S113_L33954_Ig_heavy_variable_1S113_110		ILMN_2506938	000670706	S	20	TCTGGATACACATTCACTGAATACACCATGCACTGGGTGAAGCAGAGCCA										
Mus musculus	RefSeq	ILMN_220918	ILMN_220918	ANKRD58	NM_173779.3	NM_173779.3		245381	142372809	NM_173779.3	Ankrd58	NP_776140.1	ILMN_2728575	003460307	S	1397	GAGCAAATGCCTAATACCTGCCGGCCTGGGTCTGCTGCTAAAATATCCCC	X	+	34590236-34590285	XqA3.3	Mus musculus ankyrin repeat domain 58 (Ankrd58), mRNA.				MGC130350; A630014H24Rik; MGC130351	MGC130350; A630014H24Rik; MGC130351
Mus musculus	Riken	ILMN_206133	ILMN_206133	C630023I10RIK	ri|C630023I10|PX00084K06|AK083169|2329					AK083169	C630023I10Rik		ILMN_1238832	004150255	S	1492	CGGTTCTGGGGAAGGATTGGACCCTTGGGAGAGTAGTAAGTTGATGTTTG										
Mus musculus	RefSeq	ILMN_210345	ILMN_210345	AP2A1	NM_007458.2	NM_007458.2		11771	116256501	NM_007458.2	Ap2a1	NP_031484.1	ILMN_2604688	006840743	S	2909	ACCCTGAGAACTTTGTGGGTGCTGGAATCATCCAGACGAAGGCCCTGCAG	7	-	52156398-52156447	7qB4	Mus musculus adaptor protein complex AP-2, alpha 1 subunit (Ap2a1), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence TAS]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]	Adtaa	Adtaa
Mus musculus	RefSeq	ILMN_208889	ILMN_208889	PDE6G	NM_012065.2	NM_012065.2		18588	31982123	NM_012065.2	Pde6g	NP_036197.1	ILMN_2590508	006130725	S	723	TCCTCTGTCTTGTAGCCCTTCCAGATGGGTGTCTTGGGGTGGGACACTGT	11	-	120309050-120309099	11qE2	Mus musculus phosphodiesterase 6G, cGMP-specific, rod, gamma (Pde6g), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 45745] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity [goid 45742] [evidence IDA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]	Pdeg	Pdeg
Mus musculus	RefSeq	ILMN_218846	ILMN_313301	LOC668492	XR_034647.1	XR_034647.1		668492	149262870	XR_034647.1	LOC668492		ILMN_1214187	002470132	S	72	GCGGTGGCTTGGCGCCAAGTAAAAGCACAGTTTATGTATCCAACTTGCCT	12	+	14936707-14936756	12qA1.1	PREDICTED: Mus musculus similar to zinc finger CCHC-type and RNA binding motif 1 (LOC668492), misc RNA.					
Mus musculus	RefSeq	ILMN_212652	ILMN_212652	MANSC1	NM_026345.3	NM_026345.3		67729	142348447	NM_026345.3	Mansc1	NP_080621.1	ILMN_2628883	001260041	S	1632	TCTTAGTTCATGTAAGAACTCATTGCCAATCGCACCTGTGTCCCTTCTGC	6	-	134559919-134559968	6qG1	Mus musculus MANSC domain containing 1 (Mansc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			9130403P13Rik	9130403P13Rik
Mus musculus	Riken	ILMN_202582	ILMN_202582	2610524N02RIK	ri|2610524N02|ZX00045N19|AK012153|2669					AK012153	2610524N02Rik		ILMN_1228814	000020474	S	1478	GGGGGGTGACATGAAAAGGGAAAACCCACCTGTGGAGGACAGCAGTGATG										
Mus musculus	RefSeq	ILMN_194057	ILMN_194057	ZSWIM3	NM_178375.2	NM_178375.2		67538	31341641	NM_178375.2	Zswim3	NP_848462.1	ILMN_1252526	006760433	S	2497	GCTCCTTTCTTCCCAGCCTACACAGACGAACCCTTGCCCAGGTTAGGATA	2	+	164647435-164647484	2qH3	Mus musculus zinc finger, SWIM domain containing 3 (Zswim3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C86566; 4921517A06Rik	C86566; 4921517A06Rik
Mus musculus	MEEBO	ILMN_186494	ILMN_186494	0610007P22RIK	scl000093.1_57						0610007P22Rik		ILMN_2435996	003870091	S	5	CCATCCCCAGGTCCTACTGCCACTTCTGAATAATGCACACCAGCTTCAAT						Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]				
Mus musculus	MEEBO	ILMN_220031	ILMN_220031	EREG	scl0013874.1_241	NM_007950.1			6679682	NM_007950.1	Ereg		ILMN_1219065	007380402	S	3999	GTTTGCAGTTAATATCAGCTTTGATAGTCATGTACCTTGACATAGTGAAG						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IDA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection [goid 45089] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [evidence ISS]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor activity [goid 45741] [evidence ISS]; Any process that activates or increases the rate or extent of smooth muscle cell proliferation [goid 48661] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of production of a cytokine [goid 1819] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IDA]		
Mus musculus	Riken	ILMN_201848	ILMN_201848	5730552E08RIK	ri|5730552E08|PX00006K10|AK017831|1405					AK017831	5730552E08Rik		ILMN_2545063	002140497	S	694	ACGTCGTAGACGGAGCTTATGTGTCTGCAGCAGGGCACGTGGAGTGGAGA										
Mus musculus	RefSeq	ILMN_219343	ILMN_234136	MCEE	NM_028626.1	NM_028626.1		73724	58037328	NM_028626.1	Mcee	NP_082902.1	ILMN_2707494	005910554	S	514	CTCCATCCCAAAGACTGTGGTGGGGTCCTTGTAGAACTGGAGCAAGCATG	7	+	71556823-71556872	7qC	Mus musculus methylmalonyl CoA epimerase (Mcee), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]		Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: (R)-2-methyl-3-oxopropanoyl-CoA = (S)-2-methyl-3-oxopropanoyl-CoA [goid 4493] [evidence IEA]	1110007A04Rik	1110007A04Rik
Mus musculus	RefSeq	ILMN_214133	ILMN_214133	COX4NB	NM_010926.4	NM_010926.4		18117	146134440	NM_010926.4	Cox4nb	NP_035056.1	ILMN_2644606	005810630	S	525	ATGGACTGCGCAGCGCCCACGATCCACGTGTACGAGCAGCACGAGAACAG				8qE1	Mus musculus COX4 neighbor (Cox4nb), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			Noc4	Noc4
Mus musculus	RefSeq	ILMN_214133	ILMN_214133	COX4NB	NM_010926.4	NM_010926.4		18117	146134440	NM_010926.4	Cox4nb	NP_035056.1	ILMN_2766580	003440280	S	812	ATAGTAGGTTAGCCGGAAGGGAAGCTGCAAGTGTGCCTTGGAGGGGGTGC				8qE1	Mus musculus COX4 neighbor (Cox4nb), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IDA]			Noc4	Noc4
Mus musculus	Riken	ILMN_202724	ILMN_202724	2610528M18RIK	ri|E430023H16|PX00099P02|AK088680|532					AK088680	2610528M18Rik		ILMN_1249700	007650192	S	359	GTCATCTCAACCAGTTGAAGAAAAGACTATGTATCGTTGTGATTATACTG										
Mus musculus	RefSeq	ILMN_219860	ILMN_219860	ASB12	NM_080858.1	NM_080858.1		70392	20270028	NM_080858.1	Asb12	NP_543134.1	ILMN_2965123	002070056	S	970	TCAAATTGCTGCTACAAGCCCGAGCCACTCCACGGTCACTCCTGTCCCAG	X	-	91673158-91673185:91673582-91673603	XqC3	Mus musculus ankyrin repeat and SOCS box-containing protein 12 (Asb12), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		Asb-12; 2310036C05Rik; MGC130200	Asb-12; 2310036C05Rik; MGC130200
Mus musculus	MEEBO	ILMN_209222	ILMN_209222	AKAP7	scl0003914.1_20				31580807	AY301068	Akap7		ILMN_2593753	004900020	S	861	TATCGACCACAGATTTGGAGAAGAACTATTGTACCAGATAGATCTCTGCT						Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IDA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence ISA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IDA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISS]		
Mus musculus	RefSeq	ILMN_200393	ILMN_241589	AW146299	NM_001013774.2	NM_001013774.2		381686	144446031	NM_001013774.2	AW146299	NP_001013796.2	ILMN_1217507	003780202	S	1622	ACAGCACCACCACAACATTTCCATCAGCAATAGCGCCCTGGACATCATCG	5	-	145750571-145750620	5qG2	Mus musculus expressed sequence AW146299 (AW146299), mRNA.				Gm1055	Gm1055
Mus musculus	RefSeq	ILMN_193526	ILMN_193526	VKORC1	NM_178600.2	NM_178600.2		27973	45827741	NM_178600.2	Vkorc1	NP_848715.1	ILMN_2497999	007650435	S	251	CGGACAGCGTCCTCAACCAATCCAACAGCATATTTGGTTGCCTGTTCTAC	7	-	135038037-135038086	7qF3	Mus musculus vitamin K epoxide reductase complex, subunit 1 (Vkorc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals. Vitamin K substances share a methylated naphthoquinone ring structure and vary in the aliphatic side chains attached to the molecule [goid 42373] [evidence IDA]; The chemical reactions and pathways resulting in the formation of any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals [goid 42371] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2-methyl-3-phytyl-1,4-naphthoquinone + oxidized dithiothreitol + H2O = 2,3-epoxy-2,3-dihydro-2-methyl-3-phytyl-1,4-naphthoquinone + 1,4-dithiothreitol [goid 47057] [evidence ISA]; Catalysis of the reaction: 2-methyl-3-phytyl-1,4-naphthoquinone + oxidized dithiothreitol + H2O = 2,3-epoxy-2,3-dihydro-2-methyl-3-phytyl-1,4-naphthoquinone + 1,4-dithiothreitol [goid 47057] [evidence IDA]	D7Wsu86e	D7Wsu86e
Mus musculus	RefSeq	ILMN_193526	ILMN_193526	VKORC1	NM_178600.2	NM_178600.2		27973	45827741	NM_178600.2	Vkorc1	NP_848715.1	ILMN_2522693	006420465	S	372	GTCCGTCGCTGGTTCCGTGTACCTGGCCTGGATCCTGTTCTTTGTGTTAT	7	-	135036903-135036952	7qF3	Mus musculus vitamin K epoxide reductase complex, subunit 1 (Vkorc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals. Vitamin K substances share a methylated naphthoquinone ring structure and vary in the aliphatic side chains attached to the molecule [goid 42373] [evidence IDA]; The chemical reactions and pathways resulting in the formation of any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals [goid 42371] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2-methyl-3-phytyl-1,4-naphthoquinone + oxidized dithiothreitol + H2O = 2,3-epoxy-2,3-dihydro-2-methyl-3-phytyl-1,4-naphthoquinone + 1,4-dithiothreitol [goid 47057] [evidence ISA]; Catalysis of the reaction: 2-methyl-3-phytyl-1,4-naphthoquinone + oxidized dithiothreitol + H2O = 2,3-epoxy-2,3-dihydro-2-methyl-3-phytyl-1,4-naphthoquinone + 1,4-dithiothreitol [goid 47057] [evidence IDA]	D7Wsu86e	D7Wsu86e
Mus musculus	RefSeq	ILMN_193526	ILMN_193526	VKORC1	NM_178600.2	NM_178600.2		27973	45827741	NM_178600.2	Vkorc1	NP_848715.1	ILMN_3002745	003610465	S	422	ATGATTTCTGCATTGTGTGCATTACCACCTATGCCATCAATGTGGGTCTG	7	-	135036853-135036902	7qF3	Mus musculus vitamin K epoxide reductase complex, subunit 1 (Vkorc1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals. Vitamin K substances share a methylated naphthoquinone ring structure and vary in the aliphatic side chains attached to the molecule [goid 42373] [evidence IDA]; The chemical reactions and pathways resulting in the formation of any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals [goid 42371] [evidence ISA]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IMP]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2-methyl-3-phytyl-1,4-naphthoquinone + oxidized dithiothreitol + H2O = 2,3-epoxy-2,3-dihydro-2-methyl-3-phytyl-1,4-naphthoquinone + 1,4-dithiothreitol [goid 47057] [evidence ISA]; Catalysis of the reaction: 2-methyl-3-phytyl-1,4-naphthoquinone + oxidized dithiothreitol + H2O = 2,3-epoxy-2,3-dihydro-2-methyl-3-phytyl-1,4-naphthoquinone + 1,4-dithiothreitol [goid 47057] [evidence IDA]	D7Wsu86e	D7Wsu86e
Mus musculus	RefSeq	ILMN_246136	ILMN_246136	EG628586	NM_001039235.2	NM_001039235.2		628586	142353918	NM_001039235.2	EG628586	NP_001034324.1	ILMN_3161432	007320768	S	1536	CAAAGGCAGAAAGTGCATACCCTTGTGGGATTTGCCTTCATAAGCCCCTG	11	+	26494761-26494810	11qA3.3	Mus musculus predicted gene, EG628586 (EG628586), mRNA.					
Mus musculus	Riken	ILMN_204082	ILMN_204082	A730010O16RIK	ri|A730010O16|PX00149P15|AK042615|1886					AK042615	A730010O16Rik		ILMN_1252188	005080386	S	1659	GTTTGAAGAGTGAGTCATTCACGTGTACTGGCGAGGGCTCAGTGTGGCCC										
Mus musculus	RefSeq	ILMN_210224	ILMN_231998	DNAJC28	NM_138664.2	NM_138664.2		246738	153267501	NM_138664.2	Dnajc28	NP_619605.2	ILMN_1219898	002140307	S	3180	CTCTGGCTCCCGATCACTGTAAGAGCCTGGTATTCTGTGATGCTTGCTTT				16qC3.3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 28 (Dnajc28), transcript variant 2, mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	BC020175; MGC27620	BC020175; MGC27620
Mus musculus	RefSeq	ILMN_209103	ILMN_231998	DNAJC28	NM_138664.2	NM_138664.2		246738	153267501	NM_138664.2	Dnajc28	NP_619605.2	ILMN_2592571	002060709	S	1525	GAGAAGTGTGTGCCTTTGTAGTTTTCACAGAACTAATCACACCCCGGTGG				16qC3.3	Mus musculus DnaJ (Hsp40) homolog, subfamily C, member 28 (Dnajc28), transcript variant 2, mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	BC020175; MGC27620	BC020175; MGC27620
Mus musculus	MEEBO	ILMN_215400	ILMN_215400	MAPKAP1	scl00227743.1_265	NM_177345.2			31340903	NM_177345.2	Mapkap1		ILMN_2659025	001230487	S	1942	CCTGGCAGTCCCAGCAAGACTGTACATAGCCATGCCAGACATCTCCTTGC						A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]		
Mus musculus	Riken	ILMN_202341	ILMN_202341	1200003N10RIK	ri|1200003N10|R000008O13|AK004585|1268					AK004585	1200003N10Rik		ILMN_1221466	003520386	S	801	CATGGCTACCAAACTGGGACGCAGACATGGACACAGGCCCCCACTGAGTC										
Mus musculus	RefSeq	ILMN_210581	ILMN_210581	OLFR692	NM_146355.1	NM_146355.1		258352	22129592	NM_146355.1	Olfr692	NP_666467.1	ILMN_2607075	006020364	S	909	CCCCCTCATCTATGGGGTCCGCACCAAGCAGATTAGGGACCGATTCTTAG	7	+	112517750-112517799	7qE3	Mus musculus olfactory receptor 692 (Olfr692), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence ISA]	MOR36-1	MOR36-1
Mus musculus	MEEBO	ILMN_188024	ILMN_188024	1110002E22RIK	scl22553.1.530_82						1110002E22Rik		ILMN_2449167	001770326	S	2	CTAGCCACACCCTCAGTACTTCATGTTGTGCTCTGTTGGACTTACTTCTG										
[Controls]
Probe_Id	Array_Address_Id	Reporter_Group_Name	Reporter_Group_id	Reporter_Composite_map	Probe_Sequence
ILMN_1380403	005860278	negative	permuted_negative		GCGTATTGGCTGCTGGTCTTGACCAGTGCCGGAATTCCGCTCTGATATAG
ILMN_1379274	000610201	negative	permuted_negative		TGAATGAGAACTCTTGGCCCCGGCTCCTTTCACAAAGACGGTTAGCTTGG
ILMN_1379161	004670735	negative	permuted_negative		GGAGGCATGCCACCTCTTCCTACGAACAAGTCAGGAAACGGTTCGAAGCC
ILMN_1379177	003400438	negative	permuted_negative		TTCCAATTGGCACCAAGTCATACTCCCAGTCACAGGCTAGATCTCCCGAC
ILMN_1379049	000730154	negative	permuted_negative		GGAGGCTTTCCTGCTGTGCAGGCTGTTATCAAGGGATGCTGTATCTCGGG
ILMN_1378730	004390575	negative	permuted_negative		AGGAAGATGCCCAGGTGTAATGGAGGATGAGAACGCGGAAGATGGGGAGG
ILMN_1378943	000610411	negative	permuted_negative		TGGCGGCCTTAAAACCGTTACCAAAACTCCACAATTCCAGTCTCGGCGGC
ILMN_1378974	005570403	negative	permuted_negative		AGTTTTGATGACCCGGTGAACCCCTTACTGCGTGGGATGTTGAGGTAAGC
ILMN_1378917	006420008	negative	permuted_negative		ATGGTTCTTCTCGGGAATTCTGCTTCAAGGGACTTGTGACCGGATGGAGG
ILMN_1380416	002190309	negative	permuted_negative		TTGTATGTCCGACTTTCTAGACGTGGTATAACCTTGGAGGGCCTGCCCTG
ILMN_1379287	000060095	negative	permuted_negative		ACACTGGAGCTAGCCCAATCTTCATCACTCCTCAGCATTCAACCCAGGAA
ILMN_1378789	003370687	negative	permuted_negative		ACGGGAAACTCTTCCAACGGCACCGGACTGAATTGTGGAAGTGTTAAGCC
ILMN_1379289	003990369	negative	permuted_negative		GTGGCACAGGCTTGGGGCCACTCTGCTGACCAGTGAGTGCTCTAGTATCT
ILMN_1379136	003120475	negative	permuted_negative		AACTGACCTGTGCTGGTGACTCGGCTGGCAAGAAATTACAGTATTGGGCT
ILMN_1380276	006580672	negative	permuted_negative		ACAGCTATGCCTGTCACTCGAGGAAGTCTGCAGGATCTAAATTGCTGGGA
ILMN_1378873	002690133	negative	permuted_negative		CCTAGTGTGGTCACGGCGTCATGACTTGCTGTGCTAGCGCTACAGCCCCA
ILMN_2038780	004250634	labeling	pheA	pheA	GCAGGAGCTTGAAGCACTCGGCTGCAAAGTGAGGCTTCTGGGTGCATACC
ILMN_1379263	003310445	negative	permuted_negative		AAAGCAGAGCCTGTCATCGCGTGTGTGTCGGCTGGAGAACCCTCGAAGAA
ILMN_1378577	006450204	negative	permuted_negative		CAACAAAGGGCTTCCGCCTGCTTGTCGTGGGGTGTCTGCAATGGACTCCA
ILMN_1378675	001740390	negative	permuted_negative		CAGGAAGAAATACCACGTGCTGAATGGCCGACCCGGGGGGACGTGAATCA
ILMN_1379041	001010343	negative	permuted_negative		CCCGAACATCGCACTAGTTGAACGAATGGATGGCTACATGCACCAGGTAC
ILMN_1378649	005130600	negative	permuted_negative		GTAGGCAGAAGGATGCCAGACTTGGACTCTGCGGGTGATCCTGAGCGAGG
ILMN_1380392	002470296	negative	permuted_negative		CAATGCAGGTCAGAGGTCAAACTTGGGAATCTAACCCTAGGACCCCTCTG
ILMN_1380293	006380753	negative	permuted_negative		GCACTATTCAGGGCATAGCAGCACAGCTGAAAGTCGCATCCCCAGAAGAT
ILMN_1343062	001980167	low_stringency_hyb	phage_lambda_genome:mm2		GAAGCATTCAGAGCAAATGAGGCAGCGTTGGTGTAGCACGATAATAATAT
ILMN_1380305	002710187	negative	permuted_negative		TAGGGGGAGCAGATTATTCTGCCGCAAGGCAGTCAGGACATGGGAGGGCT
ILMN_1378597	004830328	negative	permuted_negative		GCCGAAGAACTCGATGCTGAACCGGTTCTAGGCAGGATTTCATGTCCACA
ILMN_1378815	001500563	negative	permuted_negative		ATCCTGCACAAAGCTTGAGAGGCAGCCTGAAGGTGTGATATGTGACGCCT
ILMN_1378839	005260138	negative	permuted_negative		TCAGGGGCCGGATCTAGCGAACATTGAGTGACTGAGAAAAAAGCGCTGAG
ILMN_1379081	004200370	negative	permuted_negative		AAGCACAAAGCCGCCAAAGGGACGCGCCAAGAGCGGAGTTTTGAAGCAGA
ILMN_1378846	004220168	negative	permuted_negative		CATGGCCCCAGTCGCTTGCTTTCGGTTGCAAATGAACAGTGCAAGTACAG
ILMN_1378892	002760292	negative	permuted_negative		CCTGCCTCTATAGTACCCTGGGCGAGCTTTTTTATCACGTATGTCTGTGC
ILMN_1380395	006940008	negative	permuted_negative		CAATCAAGGCACCGTCATGCGGGAAGTGACGTAAATGGCAACTTAAGGGG
ILMN_1379210	004290095	negative	permuted_negative		AACACAAGATGCGGAGCTCCTGGCCAATGCTATCAAGGTGACTCAGTCTT
ILMN_1378912	002100475	negative	permuted_negative		TGAGCTCCCAAGCAGAGCGCAAGATTCACTACCCTCTACCATTCGGATCA
ILMN_1379108	005810681	negative	permuted_negative		CGTCCTGGGGCTGATCTCCTGTGCCGCCAACGCTTCTAAAAAGAGGGTCT
ILMN_1379349	001780653	negative	permuted_negative		AGTGTACACAAGCCCCAGTTCTACCTCAGCCCCCCAGGCAGGAAGTCTTC
ILMN_1378624	003520647	negative	permuted_negative		GCCGGAAACAAGAGATGGGTCTGGAGTTACCCCAGTTCAAGCGCCGAAGG
ILMN_1379029	006650685	negative	permuted_negative		GCTAGTTACGGCCTGTCTCAGACAACCCATCCGAGAGAGACTGGTTAAGC
ILMN_1378884	002850201	negative	permuted_negative		AGGCTCCCTACCGTATGCGCGTGTTTCTGACAGACGGTCTTCTGAATGGG
ILMN_1378614	005340438	negative	permuted_negative		AGTCCAGCTGCAACTGTGGAAGGGGTACACCTCTGCAGTCAGCTGGTGAA
ILMN_1379132	004850722	negative	permuted_negative		TCCGTCCCCAGTTGGGGGCCTAATGTCCAGTGGTGTGATGGAGTAGATGC
ILMN_1380422	002600520	negative	permuted_negative		ACAGGCAATATGCTCGCCGAGCCTCTGTAGGTTCGGAGGCTAAGTTTACC
ILMN_1378521	004830497	negative	permuted_negative		TCAGAACCGGGAGGGATGTGCAGACCGGACATGACTTGCCTTGGAGGGGC
ILMN_1378765	005310400	negative	permuted_negative		TTTTGGAATTGCTGACCTCTACCTGGGACTCTGGTTGTAGAGGCAGGTGA
ILMN_1378988	004120242	negative	permuted_negative		ACTGAAAGAACGAAACCTGGCCCGCGGGCGCTTGATTCAGAGACACAAGG
ILMN_1379317	004920646	negative	permuted_negative		GTTTACCCCCTTGCTTCATCCCATGGCAGTAACGGGTGGTATCTCGCTCC
ILMN_1378595	001690711	negative	permuted_negative		GCATGTCCCCAGACCCAGGGTAGAAGTCCGGAGCACTTAGAGAAGCGACA
ILMN_1378528	000010747	negative	permuted_negative		AGATTTGTTACAGGGGTCTCTACTGGTGCATGCTCGGCACTCCTAGGGGC
ILMN_1379249	001710433	negative	permuted_negative		GAAGTTAGGACACCTCCATTTTGGCTGGCAGCTTGCCTGGAATCAGTATC
ILMN_1378508	004260577	negative	permuted_negative		TTCCACTTCTGACAGGAGTGGGCTGCTGCGGTCTCCACGAATGTCTGGCT
ILMN_1379016	006350528	negative	permuted_negative		GATACAACAAAAGGGTGTAAGTGGTCGAGTTCGGGCTAGAGTAGACCGCT
ILMN_1343057	001940497	labeling	lysA	lysA	GGCCGTTCTCTCGTGGGAGACGCAGGCACAACTCTTTATACGGTTGGCTC
ILMN_1379037	004830435	negative	permuted_negative		GGCCATAGGGAATGACTGGCAATCATCAGCCACCCCCCACGCCCATTGCG
ILMN_1379272	003180647	negative	permuted_negative		GGGCCCGTGCCTGCATTTGTTGAGAGGCAAATCCAGCTCACCACTTTCAG
ILMN_1378770	004290603	negative	permuted_negative		ATAGTGAACGGGGCCGCAAAGCCCATAGGATGGAAGACAGATTCTGCTTC
ILMN_1378879	004120379	negative	permuted_negative		TTCATGTGAACGGCGAGTTTCCAATAGCTCCAGGCAGTGCGCGTCTTCTA
ILMN_1380383	001030379	negative	permuted_negative		ACTCCAACAGGAGTGAGAGAGTGTGAAGATTCTCCCTGGCATCCCTGTTC
ILMN_1380448	003940187	negative	permuted_negative		CCCCAATCTTGCGGCGACTCATGGGGACACCTAGGCTGGCCCATAACATA
ILMN_1378832	006450091	negative	permuted_negative		TCTCGTGCCCCAACTGGACCGCCAACAGGCGGAATGTGGCTGGCGTTCAG
ILMN_1380308	002140424	negative	permuted_negative		TGACCAGGGTTTCACGGAGATGCATAGAGTTGGTAGCTGATGGAGCCAGG
ILMN_1378811	005050021	negative	permuted_negative		ACCTTCCCCGAGATCAACGCGTAGAGACCTCCCACGCCATCAGCCGACTG
ILMN_1379259	002370468	negative	permuted_negative		GGAACACAAGAAGCTCCTGATTGGCTGCGGACAGGTCCCGGGAAAGGTTA
ILMN_1379283	003440372	negative	permuted_negative		GCATGGCACTGTCCCAGAAGTAAAAAGGCGGTCAACGGCTATGAGGTCTC
ILMN_1379178	002370612	negative	permuted_negative		AGGACATTATCAAGGCACCACAGCCAAGCCCTACCAGCCACAGTAGCAGG
ILMN_1380415	004070113	negative	permuted_negative		AGCGGTGTTCTCAGCGCCGACGCATGCCCTCTTAATTTGGATGGCGCAAT
ILMN_1379202	002810291	negative	permuted_negative		CTAATGACCGCCAGCAAACACGCAGTACCCCCTATCAAGGCGTGAGTCAT
ILMN_1379140	004060431	negative	permuted_negative		TGTCGGCACAGGCTTGCGACGTTCTGTCCAGTCTCGCTAGCCACAAAGTC
ILMN_1379006	007550148	negative	permuted_negative		TCTGCAGACGCAGCCGCACCTCACATTAAGTCTGCAGTGCTCATTAGGAT
ILMN_1378786	006480687	negative	permuted_negative		TAATGTGGGGACCTGATCGACGCAAAGGCGAAAGGATCCCGCTCCTCAAT
ILMN_1379073	002600113	negative	permuted_negative		AAACTCAAGAAGGGCGACACACTAAGCTGGGTAACGAGTTCAAGGAGGAG
ILMN_1379158	006180286	negative	permuted_negative		GTCGAACTAAGAATCGACATGTCAACAGAACTGGGGAGAGAAGCGGAACG
ILMN_1379247	000770523	negative	permuted_negative		AAAGCCCATTTTTCCTTCGGCCCAGATGGTGGAGAAAACCTTTCCCCGCT
ILMN_1379298	001090041	negative	permuted_negative		CAGCTGAGAACCGGTTAGTCGAGAGTGTTTAGTAGGGTATTCACGCTTCG
ILMN_1379220	006100288	negative	permuted_negative		ACCCCAGGAAGTGCTCCGTCTCTCTGAAGCTCAGATCATCTACCTGACTC
ILMN_1378902	004260133	negative	permuted_negative		CAGTTGGACACACAGCAACTCGCATATCTGAATCCGTCGCAGAGAAAGGG
ILMN_1378986	006580102	negative	permuted_negative		CTGCCGGCCGCCCTACTGGTGCAGACACATTGACAGAAGAGGAATCCATG
ILMN_1378932	003310433	negative	permuted_negative		GTCTCATCACACCCTGGACAGCAATGCCAACTAGAGCCGAAAGAAGATGT
ILMN_1379235	000160279	negative	permuted_negative		AAGGGCTCTCCCAAATCTCGAGGCGGTTCCGGTCTTCACCGGGCTTTAGC
ILMN_1378995	005490168	negative	permuted_negative		AGACTGTCTATCCCAAGACCCCTCGCATGTGCCAGGGACACCAGAAAATC
ILMN_1378929	006550161	negative	permuted_negative		TGGTGTAGAGGTCAGATTTAGTGCTTATTCCACTGCCCTGGGCCCTTGCT
ILMN_1379155	000150747	negative	permuted_negative		AGAATACAATTCGGCCTGTTGAGACAAGGTGCATGGCTCATGTGCACCTG
ILMN_1378685	001170707	negative	permuted_negative		CATGGGCGTAGCCTGTTAACTCCGAGGGTCATGGGACTAGTAAACTTCCT
ILMN_1378887	000060243	negative	permuted_negative		TGTAGGAATCCAGGGACCCAGTCACTCTCCAGAGAAGGTGTCTTGTTTGG
ILMN_1380289	001770102	negative	permuted_negative		CACACATGACCTGGATTGGAGGGTGAGGCTGCTATAGGTACTGCTGCCCT
ILMN_1380297	001230386	negative	permuted_negative		TTTCCGAACGGCCAGATGAGTGCTCCTGCAAAACTCACGACCCTATTCTT
ILMN_1379028	000460551	negative	permuted_negative		AGGAAAGTGAGCCAGGGGCATTGACGTGTGCAGCCCTCGAATCTAGAAAG
ILMN_1377920	001690689	housekeeping	housekeeping	GI_23592945-S	GCAAGCCCATGTGTGTTGAGAGCTTCTCTGACTACCCTCCACTTGGTCGC
ILMN_2588052	006280626	housekeeping	housekeeping	GI_23592945-S	CCCTCCACTTGGTCGCTTTGCTGTTCGTGACATGAGGCAGACAGTTGCTG
ILMN_1379176	001510372	negative	permuted_negative		GAAGGGCCTACCGGTTTTCTACCTTTCTGGCTGTTGCATGGGAACGGGAC
ILMN_1378758	006560603	negative	permuted_negative		GGATCACAACCACATGCGTATTGCGTCATAGACCTCTCAGGTCAGCTGGC
ILMN_1378983	001070524	negative	permuted_negative		GAAAAGGTCTAAGCTATGTCCGCATCCGGACCTATAACATGGCGGGAGCA
ILMN_1380259	002230754	negative	permuted_negative		CACTTCACCATAGGCCCGTCTCTCCAAGTGGTCCAATGATATAAGCGCAG
ILMN_1379146	004040050	negative	permuted_negative		CATTGCCCATGAGGAGACAGCGGACAAGGGAGGTTAGTAGCCAAACTGCT
ILMN_1380430	002360608	negative	permuted_negative		GGATAATTCCCAGAGAGGTGGATAGCCTGCTGTGCATCCCTAAGGCCCCA
ILMN_1379057	001980228	negative	permuted_negative		CTTGCGGGCGGGAAAGACACCCGCAGCCAGGTGGCAACAACGTCGGTATC
ILMN_1379131	004570681	negative	permuted_negative		CCTAGCTCAATTAGGTCGCTGGTCCTCTTATGCAGCTGTCGGAAGCTTGG
ILMN_1378677	003870348	negative	permuted_negative		AGTTTGGTGCATCAGGGCTTCGGGACGGTGATGTTGCTGGATGAGGACAG
ILMN_1378803	004150202	negative	permuted_negative		CCAGGAGAGAAAGGAAACTCCCCAGGGAGAGCGAAAGATGTACCAGTTCT
ILMN_1378646	007380594	negative	permuted_negative		GGAAGGTCAACCTTGGCCCGTTGACAGGAACAGATTGCTTCCAGCCCACA
ILMN_1378734	006960243	negative	permuted_negative		AATCTGCTTTAGCCCGCACCGAGAGCGTCCTTTTCTGGTCTGCCGGAGAG
ILMN_1378746	006270041	negative	permuted_negative		GAGTAGTCTGGGCCAAGGCTTGCTATCCGCTTCCTGCCCTTCTAGACACT
ILMN_1378641	001400474	negative	permuted_negative		AAGCAAGGACGGAGGAGAAGGAGTGATGACTGCATAGACAATCAGAGGGC
ILMN_1378525	001010747	negative	permuted_negative		TGGTCTTCCGCAGGCGAGGAAGGATGCAACCTCAGCCTAGGTCTAGGGAG
ILMN_1378594	001030711	negative	permuted_negative		ACAACACACGGTTACTGTCCCGGAAATGCGCGAGAGGATGAGGTCCTCCT
ILMN_1378571	004260156	negative	permuted_negative		TGCCAATGGGGTGATGGTGCCACCCTTATGATCCCAACTCTAACCTTCGC
ILMN_1379098	007210682	negative	permuted_negative		TGCCCTAGAGTGGTTAGGGTACCTGGGGCTGGCCTTGGTAAGACAGTCAC
ILMN_1379357	003780333	negative	permuted_negative		CTGTATGCTGGCAAAGTCAGAACGTCGCCCAGACTTGCGAGCCCTTCATG
ILMN_1378551	005340209	negative	permuted_negative		AGAGTGGTGACAGGGGAACCCCCCAGTTCACGTAGAAGCATAGAAGCGAG
ILMN_1379359	005270333	negative	permuted_negative		GACCTTCTGCTGCTGAGCTCCGCCTCGACCCCTACAGACATAGGTGATAT
ILMN_1379354	000380239	negative	permuted_negative		TCGTTCGACACGGAACTATTCCAGATAGACACAAACAAGCGCTGCTCCCC
ILMN_1379193	001300634	negative	permuted_negative		GGCGATAAGTCACTGGACCTCGATGTCTTAGGAGATGGCGGGTGGGAGGA
ILMN_1378880	006290431	negative	permuted_negative		CATTGTACTACTGGGCTGATTCCTCCGCATGCGCCATTTGACCCCACTTT
ILMN_1378911	000160673	negative	permuted_negative		CCCGGACAGCCACAGATGGCTATCCTCTTCCCCTTGCTGATTCTCACGAA
ILMN_1378828	001470390	negative	permuted_negative		CACCGCAGATACTATGCCTACCCAAGGAGGAGGGCCGCTACAAGCTGCAT
ILMN_1379238	006400458	negative	permuted_negative		CTCAGGATGGGCGGAACACAGGCAAAAGGGGATGGCACTGCATCCTGAGC
ILMN_1379223	007570408	negative	permuted_negative		GAGTCTATAGTGGAGGAAGGAGCACTCTCGTGACACGCCTCTCTAAGCAT
ILMN_1379325	001710494	negative	permuted_negative		TATTCCCATAAGGGGGTATGTTGACCGTCGCAAGAGTCGTGGCGGTGTGT
ILMN_1378582	002940671	negative	permuted_negative		CAGAGAACAGAGGACTTCAGAACTCCCTTTCTCCCAGCCGGAGAAACGCC
ILMN_1378566	007550224	negative	permuted_negative		AATGCTAGTCACAGCAACCTGCTGACGTCACATCGCCCAGTTGCGTCCAG
ILMN_1378623	004280259	negative	permuted_negative		AGAGCACAACTGATCCATCTGCTATCGACCACACCAAGTGGCCCAGCGGA
ILMN_2038770	006450180	cy3_hyb	phage_lambda_genome:high		GAAGCATTCAGAGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATAT
ILMN_2038770	006450180	low_stringency_hyb	phage_lambda_genome:pm		GAAGCATTCAGAGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATAT
ILMN_1379100	001510682	negative	permuted_negative		GCCAAACATCTGGGGACCAATGGTGGGGCTAATGTAGGCCACCAGTGGGT
ILMN_1378742	007100626	negative	permuted_negative		CCCATGAGAGTGGAAGATAAGGCTGGAAACAACATGGCCAAGAATGGGCT
ILMN_1379233	004050408	negative	permuted_negative		GATTCAGAGGACCAGGCTTACGCCACAAATGTAGCGGAGCCGGAAGAAGA
ILMN_1380268	005860113	negative	permuted_negative		AGTAAGGGGATACCCATACTAGGCTTGATCCAGGGACCTCTACTATCGGG
ILMN_1378899	007570368	negative	permuted_negative		AGTCACCTCTCACACGACATCGGGCCATACAACCTAAACAGAGAGCCGGA
ILMN_1378766	006040736	negative	permuted_negative		GGCTAAGAGCACTAGTGTTGCAGCTGATGACCTATTGAAGCTGGTTTCGG
ILMN_1378671	003290037	negative	permuted_negative		ACTAAATTGAACGACTGTCTCGGAGGGACCTCTAACAGAGATTGGCTCCG
ILMN_1378557	003120482	negative	permuted_negative		CTGTGACAGTGGCTCAGGTTTGGTGAGGGTTATCCTAAGAAGGAGGGCTA
ILMN_1380445	003400093	negative	permuted_negative		GACCACGAGTGTCCTTTCGCCGCGCATTTCTCGATTACTGTGTTTTGGTG
ILMN_1377921	000520379	housekeeping	housekeeping	GI_28476905-S	CCCCGGCGTCTGTTTGAAGGCAATGCTCTCCTGCGGCGGCTTGTTCGCAT
ILMN_2588053	002470521	housekeeping	housekeeping	GI_28476905-S	AATGCTCTCCTGCGGCGGCTTGTTCGCATTGGGGTGCTGGACGAGGGCAA
ILMN_1378701	000020022	negative	permuted_negative		AGAGCGGGCCCATCAGACCCTGGAGATCTGGACTTGGACTCTTCGCTTGG
ILMN_1380435	000840681	negative	permuted_negative		CAGCCTTCAGCAGCCAAACAGCCACTAACGTATTTGCTTGAAGGGGAGAG
ILMN_1378910	005900398	negative	permuted_negative		GAACAAACTGCTGAGCATCCGACAGAGCCTTGTGCTAGCAACCCATACTT
ILMN_1378838	000380168	negative	permuted_negative		GGGCCCACTCAGACATGATGGACAGATTGACCCAGACTTGGGCCTAGTAC
ILMN_1378982	002690021	negative	permuted_negative		CTAGCTCCATGGTGGACGTTACCGAGGTGAACGAGTCCGCTAAGGAACAA
ILMN_1378759	003130408	negative	permuted_negative		CAGACTCTGCCTGTGCTTCTTGGCACTTGCTTAGGCTCGAGTTTCAGGTG
ILMN_1378925	003870468	negative	permuted_negative		GACGCCGACACCCCCCACATCACGTTCGGTGATTCCAGATACAATTGCAG
ILMN_1378511	005420292	negative	permuted_negative		AAGAACCTGTTCGGGATGCCAGCTAATCCTACGGCGACATTAAAGGCGGC
ILMN_1378754	004230458	negative	permuted_negative		TTAGCAGTGCTTGCCAAGGGTTCAGTGGGGTGCTCGGGGAGCTGAATGTC
ILMN_1379341	002710139	negative	permuted_negative		AAGGTGACCGGAAGGAGACCCGAAACGTCACGCGCCGAATTAAAAGGGCG
ILMN_1380453	000460082	negative	permuted_negative		AGTGGAGATGGACACAGGGGTCGCGAAAAATCAGTGGAACATGGGTTAGG
ILMN_1378572	007610008	negative	permuted_negative		GACCATGCGTGCAAGGGCCGAACGGAACCTGTCCTCATAGAAGTACTTCA
ILMN_1379333	003140452	negative	permuted_negative		GTCCCAACAGGAGGCACAACAGCCCCGTTGCCACCTATAACGCTATTAGA
ILMN_1378713	006370220	negative	permuted_negative		TACTTCTCCGTGGCCATCGAGCCGTTTTCCAGAAGGTGAAGGATTTAGTC
ILMN_1380280	005490037	negative	permuted_negative		CATCAGTTGCCGTGCCCCAGACCCAGGGACTGGAATGTGCATAAAGAGGA
ILMN_1378544	007200255	negative	permuted_negative		GGAAAGTACCCCCAATTGTGCCCAGACTACTCCATAACGATCCTAGCTAC
ILMN_1378554	004040332	negative	permuted_negative		ACTGTGACTGCCGCTCCTCTGCCACAGCTTCATGTGATGGAGGAGAGCAG
ILMN_1378664	006660491	negative	permuted_negative		AAGAGGTCCAGAGTGACGCTATCATGAGGCTAGCCGCCCTGCAGCAGAAC
ILMN_1378872	003460753	negative	permuted_negative		AAAACACTCTAGGCCCTGATTGCTGGCTGGTGTTCGTCATGGCTTCACAT
ILMN_1380428	006380731	negative	permuted_negative		ACTTCCTCATGTTCGTGTTGCGGAGCGTCGGGCCCTGACACCAACAATTG
ILMN_1378692	002850241	negative	permuted_negative		CTGGAGGCCACAGTTGAAGAGCGCCTAAGTTGGAGGACATAGACCGCGAT
ILMN_1380384	001690681	negative	permuted_negative		AGGCACTACAAGTGCGACCAGCACTTGGGACTGAGGAAAACGCTGTGGCC
ILMN_1379149	001410767	negative	permuted_negative		CACCAGGATGAGTGTCCTACCCTTGTAAAAGCTGGAGCGACCCGTGACTA
ILMN_1378999	001770068	negative	permuted_negative		GCCTGTTTGCCATTTGTCCCTACACTTGTAGCTTGGTCGGATCGACAAGA
ILMN_1379143	004730286	negative	permuted_negative		TTACTTGGGTAGGAGCAGCTTAGAGCTTGCCTGGGTGTCTTGAGCCGCAT
ILMN_1379044	000730239	negative	permuted_negative		GGGGGAGACGGGGGATATGTAGTGGGTGGCAAAAGGAGAAAGGAGCGTCT
ILMN_1378921	002750711	negative	permuted_negative		GGACCTGGACTGGCTCTGGCGTTTGGGGTAAAGAGTGGTGTCTGTGACAG
ILMN_1379371	002340563	negative	permuted_negative		CCTAGTTGATGGGTCGGGGAGTGATGTGTGGTGTTGGAGAGCCGGCTGAA
ILMN_1379050	005820750	negative	permuted_negative		GGATCTGGCTGAGGAAGGTCTCCGCTTTTACCCCTATGCAGACCGATTCG
ILMN_1379310	000430112	negative	permuted_negative		ACCTCTAAGCCAACCCGCGGTTTTACGAGAACCCTGCCAAGCGCTGCGGC
ILMN_1379364	003440730	negative	permuted_negative		AGGGCTGGCACTCCGATAAAGAAACAAGTCGATAGAAAGTTGGACCTCCG
ILMN_1379021	002100184	negative	permuted_negative		GTAGTGATAGCGAAATGGATCGCAAACAGTGGGTCCAGCTTCTTGAGCTG
ILMN_1379062	006980092	negative	permuted_negative		CTATGTAGAAATCTGATGTGAGGTGCCCAGGCATAGAGAGTGGGGTTGGA
ILMN_1378841	003780148	negative	permuted_negative		CTGCTCCGCTGTGGAGGTCTATCGAGCAGCAAAATGCCGAGGGTTGTCCA
ILMN_1380279	006290097	negative	permuted_negative		AACAATCCCCTGCGGCCGACCTGGTGCGTAATCTTCCATTTTGCGGGGCA
ILMN_1379204	000580079	negative	permuted_negative		GGACCTCGGCCCAGAAACAGTTGTCACCCTAGTGGCCTAGGTGAACGGAC
ILMN_1380407	002690068	negative	permuted_negative		ACCGTTGGGAGAATGACTCTTACCTCAGTGCAGGGGGAAATGTAAGGACT
ILMN_1378894	000620347	negative	permuted_negative		GGTGGAAGGCCACATGTTGTGCTCTTAGGAGTGATGCATACCACGGGAGG
ILMN_1379173	002070398	negative	permuted_negative		CCATCTGCCTCCACGGGTCGGACACCCAGGTATGACTGCCAACATGACTC
ILMN_1378638	002600372	negative	permuted_negative		CTTTGCCATTCTCGGCGCCTTTGCTTCAGCTTCATCCTGGTTGATATTGG
ILMN_1380456	003710681	negative	permuted_negative		CAGCAGCGCCTGGCCGGCTTCTAGTGATGGTTCGCAAGGTGTCACGTTGC
ILMN_1379336	000840646	negative	permuted_negative		GGTGTTGAAACTTGGCGCGGATTGGTGACCATTGGGCGGGATGAGCTAGC
ILMN_1378580	004250079	negative	permuted_negative		AAAAAGTGCGAGGAACAGACGGGACACTTAGGCGAAGCAAGAGGATGCAA
ILMN_1378926	003140451	negative	permuted_negative		ATTATATGGAACGAGCTGGCAGCGCATAGAGCAACTAAGCCAGGGTGAGG
ILMN_1378806	004390326	negative	permuted_negative		AGTGGCCCATTTCAGTATACATGTAGCGTCCGCTGCATTCCCACGGCGAA
ILMN_1378751	001740646	negative	permuted_negative		CCTGGTCATGTCGTCACAATAGCCATCAGGACCATCGAGCCACGGTGCTA
ILMN_1379231	003800609	negative	permuted_negative		ACGTGGTGTACGCTGAGGCCGTGCTGTGGCGGGTTATCAAACTCAGGACA
ILMN_1378945	002120673	negative	permuted_negative		TTATCATACGTCGCCGGCGTTAGTCCAATGCCATCTTCGCCCGCGCAAAG
ILMN_1379327	002760279	negative	permuted_negative		CAGTAGGACTGTGGGGTAGTAGCCTGTGCGGAAGGGAGCTATTTAGGGGA
ILMN_1380446	002100086	negative	permuted_negative		ACACAAGAGACTCGATATACAAGCAGTTTGTTCACGTAGCGATCCGGGCC
ILMN_1378672	002480674	negative	permuted_negative		CCAGTGCACACTCCAAATTTACCGGCGGGTTGAGCTACTACTTGCACGTC
ILMN_1378951	001850243	negative	permuted_negative		AAGCCATCCTGCGGCAGTCAATGTCTATGGGACCTACGTGCCGCAGAAGT
ILMN_1379236	003800014	negative	permuted_negative		AACCCTCAGCAGGCTTTTAGGGACTCGGGTCCCATTCACCTATGCTCTGA
ILMN_1378938	006330468	negative	permuted_negative		GATCTGGTATAAGTCGGCTAAGCAGGGACCACACTCGTCGTCAAGATCGG
ILMN_1379213	003990056	negative	permuted_negative		GAGCTGAGGGACGGGGGAAGTAAGGAGAGTTACCAGGCAAGGACGTGTAC
ILMN_1379294	000620369	negative	permuted_negative		TCTATATACGGCCAGTACGTAGCGTACCACACCAGGCCAAATCAGGAAGG
ILMN_1379007	001230367	negative	permuted_negative		CTGCGGAATCGTGGCCATACCAGTGCAAAGTAACTAGCCTCTGTTTTGGC
ILMN_1378613	004760022	negative	permuted_negative		CCTGTTAGCTTGCAGGCATGGAGGTTACGCCTCTAACGCAGCCAGGCACA
ILMN_1379054	005340601	negative	permuted_negative		TTGGATGGTGGCATGACCGGCCTGGAGGCCGCTTTAACAGCAGCGAATTC
ILMN_1379275	000240347	negative	permuted_negative		GCAGTGTACGAAGATTGGGTGCTGGACTGAGGCAATGCACTAAGGAAAGG
ILMN_1380300	000840133	negative	permuted_negative		AACTTGGCGGGTAGTTACCCAGCGGCCCAGGCTCAGGTGTTACTTAGAAA
ILMN_1378636	001470706	negative	permuted_negative		AAGCAGACGGTGGCCCCAACCGGTTGTTCAGCCTTAACTTACCGGTGTTT
ILMN_1379080	006450470	negative	permuted_negative		AGGTTAAAACACACCCTCCCCCTTGCGGCATGCACAGGGAGAGATGGAGC
ILMN_1378762	002810523	negative	permuted_negative		CCTGGCTCTCCTGCGAGATTAGTAGCTTAGGACCACTTGAGGTTCGACTG
ILMN_1343064	004900050	low_stringency_hyb	phage_lambda_genome:mm2		GCCCCGTATTCAGTGTGGCTGATTTGTATTGTCAGAAGTTGTTTTTACGT
ILMN_1378783	003710438	negative	permuted_negative		TCACCTCTGGCAGTTCTTCAAACGACCTCGAGTGAACCTCCGACGGCTAT
ILMN_1378691	003060523	negative	permuted_negative		TTCTAGGCCCCCGTGCAGAACGGTGTATGTAGTGCTTTGTTTGTCTTCAG
ILMN_1378845	005910414	negative	permuted_negative		CCATGTGGACCTTGAGGATAAAGAGCAGCTTGCACCAGGTGTCCGGACGG
ILMN_1378603	002470142	negative	permuted_negative		ACATTCGTGAGCCAGAATTGGAGAGGAGGGGATCTCCCCGGCATAATAAG
ILMN_1378532	002900471	negative	permuted_negative		CTTGAGGTTAGCCATCTTTTCCGTGATTGATGTGTCTCCTGGGCCGGAGT
ILMN_1378549	003890746	negative	permuted_negative		CGACGTCAACATGTACTCCTCCTGGACTGCATCACCCACAGCTGGACTTG
ILMN_1378942	001780026	negative	permuted_negative		CTCTGCACTTCAAGGAGGTACACGCCCCAGAGAGTAGCTGGAGTTGCGTG
ILMN_1379040	005960592	negative	permuted_negative		CTCCTCGGCATTCCCCCAAGGGTTCACTCGTGGATTTGGCTAGATGTACA
ILMN_1378609	002480433	negative	permuted_negative		CAGACCGAGATGGCCGTCATTGTGTGAAGACCATGGGCAGTAACCTGCTG
ILMN_1380414	006290608	negative	permuted_negative		TCCACCGATCACGCCTGAGGAAGCTCTTTAGGTAATCAGTTGAACCAAGG
ILMN_1379153	001260136	negative	permuted_negative		AAGCTTCACTCACCTAATTCCCAGAGCGCAGGACTTCGAACTGTAGACGC
ILMN_1379126	005820431	negative	permuted_negative		CTTGTAGAATGCGCGGTAACGACCCCCCCTGCCAGAGTTGTTCTCTATGG
ILMN_1378620	003120634	negative	permuted_negative		GATCCCTTTTCTGGCTCCAAGGCGGACCAATTGTAAGCGCGTGTGTCGAT
ILMN_1379227	007050670	negative	permuted_negative		GCCGACGAGACGCCTTTAGCTTCCTACTGAACGAATTTTCCAGGTCCAGC
ILMN_1379036	000520402	negative	permuted_negative		ACACTGCCTAGTACCGGACAATGGCCGGCCCCAGCCTGCCACAAACAACG
ILMN_1343058	000780743	labeling	pheA	pheA	CCGCAGGATGATCAGTCCGGGGCGCTGCATAGAGTGCTGTCTGCATTTTC
ILMN_1379199	006860471	negative	permuted_negative		AAAGAGGCCCCAGCCCGGAGGCAGCATGAGAGGGTACTCCTACAGAGCTT
ILMN_1379304	006130019	negative	permuted_negative		ATGCTGGTTTATCAGGATCGAAGCATCAAAGGGGCGCTGGGATTGGGCAC
ILMN_1378790	001410273	negative	permuted_negative		CAACATCTTCTTAGTCCCCGTTCGGAGCGCAGGTGAGGGTCAGTCCTCTC
ILMN_1379076	001470743	negative	permuted_negative		TTAGTCATGACGGCCCGCATGCCAGATTCACTCGCTCTGTAAGATCCGTG
ILMN_1379308	005290377	negative	permuted_negative		CCAGCAGACATACCATGGGTATTCCAACAGAAGGGGGACGGAGGCAGGGA
ILMN_1379277	003180273	negative	permuted_negative		TTGCTGAGTGTGCAGGTGAGATGCTGGCTCACACAGTCTAGCCATCACCC
ILMN_1378518	001030722	negative	permuted_negative		ACCTGTGATCATCGCGTTTTGGTGCTGGACCTAGGACGGCTGAACTCGTT
ILMN_1380402	005690113	negative	permuted_negative		AAGCCTGGGTTATAAGTGCGCCCTGGCAGTGGTGTATAGCCTTAAAGATC
ILMN_1378738	006580020	negative	permuted_negative		TTGGTGAGGGGGTCTCCATCAGCGATAAGGACGAGAGGACATGCAGATGG
ILMN_1378817	003140113	negative	permuted_negative		AGGAGCAACTAACGACCTCGCTGAGAGTATTAGTATGGCCGGGTGGAAGG
ILMN_1378970	005360593	negative	permuted_negative		CCGGCCCATCCACTCAGCAATTTTCACCCATTAGCTCAAAGCTATTCGGC
ILMN_1378821	006220754	negative	permuted_negative		GTCAGTGCAGATGGTTATTGCCTGGTGACGGTCCACACGCAGCTAGACGA
ILMN_1378890	003170368	negative	permuted_negative		TTCTGGGTTGATCTCCGCGAGAACGAACCCTTGGCTTCCGGTACGCCAAC
ILMN_1379094	000510255	negative	permuted_negative		AGGAGCGGCTTTTCCGGACAATCGAACCACCACATCTACATGAAGTAGGC
ILMN_1379063	004280747	negative	permuted_negative		GAATTACACGGCTTCTCTGGGGACCTCTTGACGACGGGACCCCTTACCAG
ILMN_1380418	006110215	negative	permuted_negative		ATGCGGTTTGTCGACCTCCCAGTAACCAACTGTAAGCTACACTGTGCTGT
ILMN_1379000	000650463	negative	permuted_negative		TTGAGTAGAGGAGGTCCTAATAGACCGAACCGTTCTTACCTGCCGAGATC
ILMN_1378504	001430601	negative	permuted_negative		AGATGCGTTTGGAAAAAGCAGCACCTGCTGTCCCTAGCTGGAGATGGGTG
ILMN_1379338	001990433	negative	permuted_negative		AGCCCCGGGTCCCTTGACTGGCCCAGCAAAAAACCCTATAGAAGAGGCAC
ILMN_1379115	005870750	negative	permuted_negative		GTGGCTCTTTGCGCAGGCATGCACACAGCCTGATTGCAGTTTTACACAAC
ILMN_1379311	000160181	negative	permuted_negative		TCAGTGCACCAGTCCACCCTGTCCATCGACCAGCCGCCTATAACTTTCCC
ILMN_1378564	006450543	negative	permuted_negative		CTTAGGCTTATGCACTGGAAGAGAGAACCTGATAACAACTCACGCCCGAG
ILMN_1379375	002510639	negative	permuted_negative		CATTCACATTCTGTGTGCTCAAGACCGGTACACACCTGAACCACGTCGCC
ILMN_1379170	000510725	negative	permuted_negative		GTCGCCCCATGTCGGGGGTAACCCATTCAGAACACAAATAGAAGTCAGGA
ILMN_1379113	004830689	negative	permuted_negative		ATGGATCTTTACGCACTAAGGACACACTTGGGGACATGTCCCGGGGCAGA
ILMN_1378753	001300553	negative	permuted_negative		CCCCAATCCATACTGCTGCTTTTGACATTGAGGCCCGCTTGGGCCCGTAC
ILMN_1378698	003170687	negative	permuted_negative		GTCGGGAGTTGGGGGCACTTGTTGACGTTTCTCGTCTTTTCTGCTCCGCA
ILMN_1378981	003460561	negative	permuted_negative		CTTGAACTCCTATTTGCCACAATTAGCTGGTTAGCCCGGGATCCGGTTCA
ILMN_1378993	004590484	negative	permuted_negative		GTCCTGGCATGTCCTGGCGACTCACAATTGCTTACATGCCTATGAGACTG
ILMN_1380419	005700309	negative	permuted_negative		CTCTGGGGGTAGCCTAGGGGTTATGGTGAGTCCTGCCCATGCAATGGCAT
ILMN_1378607	006270441	negative	permuted_negative		AGAGCTCACGGAGCATGATTCCATGCCAATGCGGCCCCAGTAAGGGCCTT
ILMN_1379187	003290682	negative	permuted_negative		GGTGGCCAATCTTCTTGAAAAGCGGGGCCTGAGTTGCTGGAACTCCAGAA
ILMN_1379351	000240364	negative	permuted_negative		TGCTGTCCTGGCTCCAGAACAAGCCCGAGCAGATCGGAGGACTTAAGAGT
ILMN_1379240	005560703	negative	permuted_negative		TGAGCACCGCAGTGCCATTGTTAAGGGATCACAGCCTGAGGGAGTGCGAG
ILMN_1379361	005910338	negative	permuted_negative		AGCGATCCCTTTCCAGTCACTAAAATCTGCGAAGCCCAGGGCATCTTGCC
ILMN_1378592	005810497	negative	permuted_negative		AGTAACCCACTTCAGCCGAACGCAACCACCCACAATCCGCATGACTTGTT
ILMN_1378800	005560575	negative	permuted_negative		TGCCGGGGTTTGCTGGTATGCCCTACCCAGTCGCTCAGAAGGAGAATTGG
ILMN_1378622	006980725	negative	permuted_negative		CTGGCCGGCTGCCTTGTACCACATTTTCAGCAGGTAGTGAGCGTTCACAA
ILMN_1378735	005050370	negative	permuted_negative		TTCTCACCTGCAGGCGCTCAGAGAGATAAAAGTGGGTCCGCATGGCAGCA
ILMN_1379348	001240687	negative	permuted_negative		CAGTTCGCCTTTGTAGCACAGCCACAGATGCAGGTCAGTCACAATATGTC
ILMN_1378840	006860538	negative	permuted_negative		TGTAGGGGGTGCTCCAGTAGCAGGCCTGATCCACAAGAACTTAAGGCAGC
ILMN_1378968	002510754	negative	permuted_negative		ATGGAGATGTTTACATGCAGCGGGAGATGCGGCCCAGCACTTGGTCAACT
ILMN_1378537	000780735	negative	permuted_negative		CAAGGTTTACTCCGGGCGGAAACTCTCATTCGCATCACGCAGCTACCATC
ILMN_1378553	000360500	negative	permuted_negative		CATAGCCTGAGAGCAGACCCCTCCGGCACTACACAATCCCGACTTGCACT
ILMN_1380315	004490133	negative	permuted_negative		GAGTAGTAAAGCCACGACCTGGCCACCAACAGTGAAGAGTATGAAGCTGA
ILMN_1378523	005870577	negative	permuted_negative		TGAATTAAACCCGGCACGCCGGGAACGGTCCGGTGCCTCTTTCTTACAGG
ILMN_1379022	002940035	negative	permuted_negative		TTCAGACAGAAGCTCGCCGTGCTGGTTCGTGACAAGGCTCAGCTGCATTC
ILMN_1378941	001240022	negative	permuted_negative		CTGCAATGAGGCGCTCCGTTGTGAATATGAGACCCTCGGAGGATTGGAAT
ILMN_1378634	006110725	negative	permuted_negative		CTCCGGCCTGTGCTCAGCGGAATATGCCTTACCTTCCTGAACCACACACA
ILMN_1378927	005050639	negative	permuted_negative		TTTCCTGTGTTGCTAGGGGCGAGCCTCCTGCTTGACGTTGTCCGAAGGAC
ILMN_1379074	006110722	negative	permuted_negative		CCTTTGTCCACATGCACGCAGCCTCACTCGACCGTAAGATTGTTAAAGTC
ILMN_1378791	000670563	negative	permuted_negative		AGTGTCACATGAACCATCTCAGGGCCGGCTGCTGGCAACCCTTGGTTTGC
ILMN_1379134	001050154	negative	permuted_negative		GTACTGATCAAACGTTAATCACCCCATGTGCTGTCAGCCACACCGCACAG
ILMN_1380278	004120168	negative	permuted_negative		CAGAAACCTGAACCATCAGAGAGCCTGGCACCCCTAAAACTACGACCAAC
ILMN_1379276	002120333	negative	permuted_negative		CGGCCGTGTCAGGAGCGACACAACCCAAAATCTCTAGGCGGGTCCTGAGC
ILMN_1379196	004180670	negative	permuted_negative		CTTGGTAGGCAAGCGTGAGAACACCATGGCTAATGGCTGACGAATGTGAA
ILMN_1379122	006940601	negative	permuted_negative		TGAACGCTTACTGCCGGTATTCAAAGAGCCTGTCAAGATGAGTGCAGCCG
ILMN_1379090	002000255	negative	permuted_negative		GAATCACTCGTGATGACATCAAAGGGCGCTTGATGGGGCGAGGTTTCCAG
ILMN_1379217	000020091	negative	permuted_negative		TGGGTATGTGGATCGAAAGAGACCGTGTGACTTGGTGGCTGCAATTCCAC
ILMN_1379166	000770458	negative	permuted_negative		CAGGGATTGTTTAGAAGGGTGGGTCTACCGGGCATAGATACGGCGCAGCT
ILMN_1378904	006130358	negative	permuted_negative		CGGATGGGGTGTGCAAAGAATCCTACTTCTACTGTTCCGGATTCTGCCCT
ILMN_1378967	004010717	negative	permuted_negative		TAGAAGAATGGGGCATGACTCTCGGGAAAGAAGATTGACTGGGCGCAACT
ILMN_1380406	003460520	negative	permuted_negative		GAACACGGTATGGACTAGGGATCGCACAGTTCGGTAGTATGAAGATACCC
ILMN_1378589	006650066	negative	permuted_negative		AATCTTAGATCACTGAAAATGCATCCATTAGCGTCCCCCTGCCCGACGCC
ILMN_1378579	006180674	negative	permuted_negative		CGAGCGCCTGCCCCATTGGTGCTATGGATGTGGGGTTTGCTTTATGTTCT
ILMN_1378818	002450563	negative	permuted_negative		CAGAAATGACCTCAGCAGCCACGGGGATACAATGAGGAGAATGAACCGTG
ILMN_1379208	002850291	negative	permuted_negative		TTACTGCCTGTGCTTGATGCGTAGTCGCGCGTGATGAGTTAGATCATCTG
ILMN_1379226	006480019	negative	permuted_negative		ACCTATTACCAACCCAGCCCTGCACACCCGTGAAAGACGGATCTACAGAC
ILMN_1379254	002070646	negative	permuted_negative		GGTGACAGATTATCCCCATCCGTAGCTGTAGGTGATGAGGAGGGGGCCCA
ILMN_1379232	005290619	negative	permuted_negative		GGTGTCGCCTTGAAGAAGCGCGACATAAGGGCCGCAAAGGCGGTCTACGT
ILMN_1380378	006650379	negative	permuted_negative		ACACAGCCGACCAAACCTCGAGTACCAAGCCTACGAAGCCTCCCCCATCA
ILMN_1380269	000130678	negative	permuted_negative		GTATTGGAGGGACCAGCCTAAGCATTTCCCCCTAGTTCCAGAGAATCAGA
ILMN_1379285	003360240	negative	permuted_negative		GGCGGGTTCGAAAGGGACTCTGCGCTTACCTTAAGGAGGGACATCGTGCG
ILMN_1378651	003610670	negative	permuted_negative		CTGGTTGTGGGGATCATGTAGGGGTTACTAAGCCTGGGTATTCTAGAGGT
ILMN_1378586	006420360	negative	permuted_negative		GGCTACATGTGTGAGCCCTCAGTACTGGATGCACCTTCTTTTTAGCATGG
ILMN_1380310	001430681	negative	permuted_negative		TTAACCGCCAGGATCTGGCCTGGGCTGCAACGGAGGTTTTGCTTTCCAGG
ILMN_1378668	007000270	negative	permuted_negative		ACGCAGAAAGGCGGACTTCAAGCGCAGATACTATGTATTCGTGGGAGTCA
ILMN_1378871	004880685	negative	permuted_negative		CACGCTACCACACTCCCTCTGAAGTCAGCTTGATAGACTAGGGTAGGCAG
ILMN_1380457	005810224	negative	permuted_negative		GGGCGATGATGGCCGCAGAACATGTCCATTCTGGCCGACAAGCTACTCAC
ILMN_1378971	001660189	negative	permuted_negative		TCTGGATGATGGCTCACTTGACTATGCCCAACAGGCCGCGAGTCCCTGCG
ILMN_1378737	002490730	negative	permuted_negative		CCTCACCAAGCCGAATCAGTGTTCCAGACGCTAAGAGAATGGGCAGGAGC
ILMN_1379278	000380575	negative	permuted_negative		CGGGCGGGTAGACAGAGTAGGCATCCACATGTAACTGAGTGGACGGCATG
ILMN_1379243	006400349	negative	permuted_negative		TAATGCTCTCAACCATTCCCTGGGTGATGCGCGATGACCTGTTGAGTCAG
ILMN_1378612	001940450	negative	permuted_negative		ACATTGCAGGTGGACATCTTATCAATCAGTTCCTGTGTGCCCTGGGGCTC
ILMN_1378805	006200168	negative	permuted_negative		AGGGCTAAGACAGGGTGGTACGTGTGCCATCGTATATGTGGCTGGAACGC
ILMN_1379086	004200438	negative	permuted_negative		CTGCCATGGGTCGTAAGACCTATCAGGTCTCCTACGGATAGTCCGCCCCC
ILMN_1379025	004490392	negative	permuted_negative		ATCCTCTGCCAGGGCAAATTCAAGGTCGCACCCAGTACTTCCTGGTCGCG
ILMN_1379068	003830598	negative	permuted_negative		CCTCACTCTACTAAGGCACAGATGCCATCAAACGTCGCCGCGCCACAGAC
ILMN_1379305	000130315	negative	permuted_negative		CGGTGGCCATCACGCCGTAGCTGAAATTGTGGTGAAGGAGGTCGATTAGC
ILMN_1379374	002900653	negative	permuted_negative		CGGAGAACAGATTTGAGTCCATGCTCCCACACGAAGGCGTACCTCATGGA
ILMN_1379101	003400739	negative	permuted_negative		GTTGCCACAAGGGTAAAGGAGCTTCGTTCAGTCCAAAGGCGAGTGAACAC
ILMN_1378499	002710475	negative	permuted_negative		GAGCTATACCCTGCAAAACTTCCTAGTGTAGCGCGTTGGGAGGTGCCACC
ILMN_1378997	004780309	negative	permuted_negative		GATGTCAGGGTTACAAATATCCACCCCGGGCAACCACAGACCGGCCAAGG
ILMN_1379366	003360064	negative	permuted_negative		AAGTTATAGCCCGCCCCAGACTGCAGAAGGGAGTCTAGCTGTTCGAGATG
ILMN_1378540	004850450	negative	permuted_negative		CCAGACCTCAGGGCTTCCCTCAATACTACCATGTAACTCACTCAAGATGG
ILMN_1379117	001010544	negative	permuted_negative		CCACTGATCACTGTGTCTAGTCATGCTTGACTGGCCCTCACGGCGGTTCT
ILMN_1380377	000460129	negative	permuted_negative		GAAGTCGCACTGCAGCTGGGATCACTCGCAGTCATTGACAGTCATGAAGG
ILMN_1379321	006200243	negative	permuted_negative		ATGAGGGAGGATGGTGTTGAGAGGAGGGTTCTGAGGACGCTGAAGGTACT
ILMN_1378763	001440736	negative	permuted_negative		ATTCTGGATGGTCAGTCGGCCCGTATTACCTGCCGGGGTTTCTCTGCCTG
ILMN_1378665	005670195	negative	permuted_negative		CTGCGTTAAGGACGCTCTTTCGTGTCTGCTAACCGACCTTCTTGCCATTG
ILMN_1378541	001980630	negative	permuted_negative		CACTCGTGAACTAGGACTGTCGCGGAGATCCTACTACTTCCTCCACGGAG
ILMN_1378882	002190681	negative	permuted_negative		CTTAGTTCAGTTGCAATTACCCAAAGCAGGACCTGAGACAGGCAGCTACC
ILMN_1379328	004230390	negative	permuted_negative		GGCCTACGAAAATTCCGCTTCCGTTGTGCCGCGGTTCCCAGTGGCTCTGG
ILMN_1378548	003520768	negative	permuted_negative		TACTTAAGCCCTCTCGCCGTTGCATTCACTGAAGCTAGCCTACCCTCGTT
ILMN_1379083	003420678	negative	permuted_negative		ATGCGTCTCTTCGTAGCCTTAGGTGTTGCTTTCGTCCTTGGTCAGAGCTG
ILMN_1379356	006860131	negative	permuted_negative		TTTGGGGAAGGAGACAAGCTATGGGCCCTGGATTTCATTCGAACCAAGCG
ILMN_1378726	005890673	negative	permuted_negative		TCCAGAAGTAAGGCTGGAACACGCCCGGGATCAGGATAATGAGCTCACCT
ILMN_1378787	007050494	negative	permuted_negative		GCTGTCCGGGTTGGCTCTACTAAAGATTAGGAGCAGTAGTACCTATTGGC
ILMN_1378606	006940647	negative	permuted_negative		TCGCCATGATCACACCACCCCGTGTGGGATGTAAATGACAGAGTGCCCCT
ILMN_1378877	006580220	negative	permuted_negative		CAAACCGCATAAGGTGAATGTGGCTGTGTCTGTATCACCCAGGGGTAGCT
ILMN_1378844	002570369	negative	permuted_negative		GCCGTTATAGGGCTGGTTGAGGTGGAACTTCTATCGTGATGGCCCAATTT
ILMN_1379207	003060291	negative	permuted_negative		TGATGGCTTGGCCCCCGTTGGGGTGCTGGGAGACTAGTACACTAGGTACT
ILMN_1379184	007000427	negative	permuted_negative		TCATTACCTGCTCTGGGCGATTGACGTTAGAAGAGGCTGCCACTGCACTC
ILMN_1380401	001940735	negative	permuted_negative		GAAACCAAGCAGGGCGGCTTCATGAGCGTTGTGAACCAGGATTTGGTTGT
ILMN_1379014	003850193	negative	permuted_negative		GCCAGACACATGTCGAGGGGCTTTTTGGTTCCTCCAGCAGCGACTCCACT
ILMN_1380450	004490681	negative	permuted_negative		CTCGGTCTCTTGCAAATCAAGGGAGCGTCAGCAAGTCGGGCAGTAAGAGT
ILMN_1379330	002070546	negative	permuted_negative		GTGACAACTGAACCAGCCGCGGTAGGGGGTCTTTTAAGTTGACAGTGGAC
ILMN_1380306	002100241	negative	permuted_negative		GCCCGTCAAATGGGGGGATTAGCCTTGGAGGACTGCAATTTCTGTTTGAG
ILMN_1380381	005810373	negative	permuted_negative		TACCCACAACCTTGGTCAGGGCACAACAACTCCACAGGCTGGCTCTGCTG
ILMN_1380432	001230093	negative	permuted_negative		GAGCCGTTGTGACCTTCTCTGAGTTGTGAAGCAAGTCTCCTCTTATGCAC
ILMN_1379075	006450762	negative	permuted_negative		TTCGGAGTGGGCTTTCTATGTCTGGGCTAGTGCTGCGGCTGTCCACGTTC
ILMN_1378931	001990523	negative	permuted_negative		TCTGGATACCCACCGCGCCAAGCACACACGTCTTTCAAGGGTTCATTCGA
ILMN_1378830	004540021	negative	permuted_negative		GTCGGTCCTACCGTTCCATTTTGAACGGAGAGTCTCATGCAAAGAGGCTC
ILMN_1378722	004210717	negative	permuted_negative		TGTCACGAAAGAGGAAGCCAGAGGGGGGTAGGGCTAGGGTGGCTGAACTC
ILMN_1378784	007150403	negative	permuted_negative		AGCTGCCATCCGGATCGTTATGCCAATGAAGACACGCAAAAGCTAGAAGG
ILMN_1379004	006060541	negative	permuted_negative		TGGCTCTCCATTCCTAGCTAGTGTCCCTACACAAGCATCTGCGTTGTACT
ILMN_1379261	006220241	negative	permuted_negative		ATTCCCCCCTGTGGGCATCTCGGAACAAATGTGGATACTTTCAGGGGCGT
ILMN_1379138	006980059	negative	permuted_negative		TGAATGTATAGGCCCGGGGGAAGCTTATCCCAAAAGAGGTGTGGGTTCAG
ILMN_1378813	004890482	negative	permuted_negative		AGTGTGGGTTTAGGACACGGGGGTTAAACTCTGGTGCATGTCCATGTTTC
ILMN_1379251	005050347	negative	permuted_negative		GGCTGGCCTACCCCAGCTGGACCACTCTGAGAAGAATGCTTTGATTTCTT
ILMN_1378627	004730209	negative	permuted_negative		GAGTTACCCTTAGTTCATTGGAACACCCAAAGGGCGATCCACCCGGCAGC
ILMN_1380447	002940528	negative	permuted_negative		AGGCTACTTATATAACACGCCGGTCTGTCAAATGGCCCGGCGTGTGCGCT
ILMN_1378801	004920239	negative	permuted_negative		GTCGCTCAGGGACAGTCTCTTGACTGTAGATCGTGTGGACAGTCTGCGGA
ILMN_1379222	001090300	negative	permuted_negative		CGCGGGACCGAGGAGCATCACAGGCCTTCTGCCATTTTTATCTGCACGTG
ILMN_1378662	001340300	negative	permuted_negative		CGCCTGATCACTCGCCGGGGATTGAGCTAACAATGTCGGAAGTGGACTCC
ILMN_1378715	000670524	negative	permuted_negative		CAGAGGTATGGAAAACTTTGGGACGCCACCTGAGGCCCAATCCCACTGGT
ILMN_1379318	005890468	negative	permuted_negative		TGGACTGCCGAGCATGCACCTTCTACAGCTCTTACGTCCAATTCCAGAGC
ILMN_1379048	002900767	negative	permuted_negative		CTGTGGCCTGCATCGTCCGGTTAGCCTCCGAGCAGGAGGTCGCAGATTGT
ILMN_1378687	001440546	negative	permuted_negative		CTTGTCCCCGGTGTAGCCATAAGTTGGTCTCATTTCTTCAACGTTGCCAC
ILMN_1379035	001690341	negative	permuted_negative		CGTTCACCTTCTTGCGCACCACATCTCGAGGTAGTGCTCCGCAGAGAGCT
ILMN_1378875	003130243	negative	permuted_negative		GGGGATTCCCTTCCACTTACGCCAGACAAATCTGTGCGGATAAACTCGGA
ILMN_1378615	000940471	negative	permuted_negative		ACGGAGTTTGAATCCTGCATGGCACTGTTGTCTACGCTGCGACTCTGCAC
ILMN_1379042	006280343	negative	permuted_negative		CACAGCAAGTAGAGCAGATTCGACACCCTCCCGGGTGCTTCCACTGCATG
ILMN_1378529	002680121	negative	permuted_negative		CATTGGGGATCTCGAATATGCGCACAGGCGTTGGTCTCTCTATGGGTTTG
ILMN_1379331	001500452	negative	permuted_negative		GGGATTGACGACACCATGCTGCCGGCGTTTAACTGAATTATCAGCAGATC
ILMN_1378689	005310703	negative	permuted_negative		TACGAGCACGCATCTGCTCAGCCATGTCATGGACGGAGAGACCTTGTTTG
ILMN_2038768	002600040	cy3_hyb	phage_lambda_genome:med		CGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTC
ILMN_2038768	002600040	low_stringency_hyb	phage_lambda_genome:pm		CGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTC
ILMN_1379303	007050288	negative	permuted_negative		TTGGTCAATACATTTGGGTATAGCTAGGGGGTTGTGGTAAGGGCGGGTGG
ILMN_1378684	006520112	negative	permuted_negative		GGATGTTTGCTCGAGGAGTGGATATGCTAGGGCGAGCGTGTAGCTTGCTG
ILMN_1378669	004860400	negative	permuted_negative		CATATGAACCGGCTTCAAACGCGGTCTCTCGGAGGTGAGAGACACCTTCA
ILMN_1378729	005690356	negative	permuted_negative		GTCAGTGCAGCTCCTATTGACCCAACGTCCCAAAGTACACACTAACCTCC
ILMN_1379070	004040722	negative	permuted_negative		GAATCGGGCCCTCCAGGCCACAGTATACTATGGAATTCAGGTCGAACACC
ILMN_1378596	000520475	negative	permuted_negative		GCCGTCGCAGTAGGGACGCTTCTGTGCATTTGGTGATTGGGGTAAGTAAT
ILMN_1378792	005290064	negative	permuted_negative		GAAGACCTGTGGAGGTTACGCGATCCGCTTGTCCGTATGTTGTGGCGGTG
ILMN_1378604	000010692	negative	permuted_negative		AAAGACCACCTACCAGTTCTGGGGTCAACGTTCCTGCGATTTGTAAGGGA
ILMN_1378643	004250288	negative	permuted_negative		AGATGCGTGAAGGTCGGAGAAGGAGTTTGCCTGGACTGGGTCTGTTAAGT
ILMN_1379369	001570639	negative	permuted_negative		GCGAATGAGTAGGGCTTGAACAAACGAACCAGCACTCTTGGTGTTGTGGT
ILMN_1378740	004120192	negative	permuted_negative		AGGGAGCCAGGGGTCGGAGCTATGTGGGAACTACTGAGAACGGGGACTAT
ILMN_1378915	003450092	negative	permuted_negative		CATAGCGCCGGCGGAACCATCGTCCTGATAGGTGTTCCTGACTGGAACCT
ILMN_1379367	005220161	negative	permuted_negative		GTGCCTCGAGCCTTCAACGAGTCAGCGCACACATCGCTCAGACTAGAGGT
ILMN_1379127	004150743	negative	permuted_negative		GTCGACAAGACAGACAAAACAACGTCGGGATGACAGAAAAGGTGGCCAGC
ILMN_1380283	004590138	negative	permuted_negative		GGCGACATACCATCCCAGCCACCACTACTTCACCAGAGCCTCCAAGTATG
ILMN_1380405	004880168	negative	permuted_negative		CAGGGGGAATAGCTCATCAAGTCGCTTCCAGCACACCTCCGTTCTAAGAC
ILMN_1379089	005130746	negative	permuted_negative		TCAGTTAAAGCCGGCACTAGGAAAAGAGACTTCCTAAAGCTCCGCCTCCT
ILMN_1379279	005260026	negative	permuted_negative		CACCTGCCAACAAACCTTCGCCCCACTGACCTGGCAGCGTGTCTTAGCCG
ILMN_1379197	000380647	negative	permuted_negative		CATTCACGAAAATCCGTCAAAGGACCTTTCCAGCCGCTGGCTGTGAGGAT
ILMN_1378630	004040725	negative	permuted_negative		CATGTGAAGGGCCAGCATTCCGAGCTAAGAAATATCGTGCCGAGAACCCT
ILMN_1378864	002480445	negative	permuted_negative		ACCCCAGAAAGGAGAGCTCAGGCGAAACTCGGTGTCAGTATGAGCGTACA
ILMN_1379266	006510537	negative	permuted_negative		TAATTCACTCAGCTCCGTGTGCACAGGCCGGTTCGATCCTTCATCTGTGC
ILMN_1378674	006020646	negative	permuted_negative		TTGAACGTACCCGTGAGGACCCCCAAAAATAGACACACGGGATGTCTTCT
ILMN_1378706	001090075	negative	permuted_negative		CTGAGGTAAGCTGTGTATGGCTCCAGGACGACTTCTTATCCGACTGTAAC
ILMN_1379030	002750379	negative	permuted_negative		AAACAGTGGTAGGGAACAATTGCGAGAATGAGGCCTCTGAACGGGGTCAG
ILMN_1379206	006040500	negative	permuted_negative		GCTGCTCGTGAACTAGCGATCAGGCATCTAGGTGAGTGATGTGGCTCCTG
ILMN_1378697	003990494	negative	permuted_negative		GGGAGTTCCAGGGGTACCTCTAATCAGGGACAGTCTTCGCCAGTAGTAAC
ILMN_1379164	003420471	negative	permuted_negative		AGGGGACGGAGCGGGGTTTCTAGAGGTTCACGTTCGCGAGCCTACAACTA
ILMN_1378987	002650563	negative	permuted_negative		CCGATGGTCGGTGTTCGGAACAAGATTGGAAAAAGGAGGCTCAAAAGGGG
ILMN_1378764	000580307	negative	permuted_negative		AACCACACCATTGACTACGAGCGGACACAGTCGAGCTCAAGCAGCCATGC
ILMN_1378563	000150440	negative	permuted_negative		GAGAGAGCAGAGGAACACAGACTCCAGAGGGATGAGCCATGCTTGGGCAG
ILMN_1379323	000770468	negative	permuted_negative		CTCAACCCCCTTCAAGTGAGCCCGCCTCCAGTAACTATAAGGAAATCGGC
ILMN_1380263	006250047	negative	permuted_negative		CAAGATGCAAGCGGAAGTATTGTGCTACAGAGGCCGTTTACCCTCCGCCT
ILMN_1378711	007050349	negative	permuted_negative		CTGTGCCACCCACAACACGAAGCGGGTGGGCTGAGAAATTCTTGAAGCGT
ILMN_1379264	000540564	negative	permuted_negative		GCGGCAGATGATGCTGTAAATTGAGTAAGCAGAGCGGAAGACCTCCCCCC
ILMN_1378600	005960722	negative	permuted_negative		AGACTGCACATGCCCAGTATGTCAGGTGACGAGGAACCAGCGACACACTG
ILMN_1379046	004150653	negative	permuted_negative		ATAAGCATTACTGTGTGGGAGACGCCGTGCATACAGGGAGCTAGACAGTG
ILMN_1380437	007610187	negative	permuted_negative		TTCATTCTCCACGCCGGCCAGGGCACATCTGGGAACTCGTGTCGATCACT
ILMN_1378835	000240053	negative	permuted_negative		ATCTGCGCTCAGGCCTCTTTCGGGTAATGTCGCAACTACAAAACCCCAGC
ILMN_1379183	005080543	negative	permuted_negative		AGGGTTGGGGTCGTGATGAAGCTTTGACTGAGCTTTCAGGGTGTTAGAGG
ILMN_1379102	006420424	negative	permuted_negative		CACAAGCTTAACGGCGGAGCCATCAGGAGAAAAGCACCCACTGGCCATTT
ILMN_1380303	003390301	negative	permuted_negative		TTCCGTCGGTTCCCGGTTGTTGTCAATGGGGTCGGAGTTCTTGAGCTGGT
ILMN_1379257	003140537	negative	permuted_negative		TGTCCCGCCTGTGAAAGGTGTGGCCCAGCGCGAAAGAGTCATTGGGACTA
ILMN_1378694	004290307	negative	permuted_negative		ACGCAGTCACAATGGCTAAGACTTTCACAGACGCTAGACCTCAGTCTGGC
ILMN_1378814	002070201	negative	permuted_negative		GGCATATTCTGTGGGTCTGTGTTTCCCAAGTGGTGTAACCCGGTGGTACA
ILMN_1379295	000110246	negative	permuted_negative		CCCAACCTCAGAGTGTCTAGGAGTGTTGGTATCTTGGGAACAGCAGGGGT
ILMN_1378500	006350360	negative	permuted_negative		CCGACTGCATGACTGCAAATGGCAGAACAGGGGCCTAGGTATATAAAGCT
ILMN_1378699	000630307	negative	permuted_negative		CTCACCAGAACTGGCTACGGGGCTGTCGTGGATCTCTCTTATATTCTGAA
ILMN_1380455	002750086	negative	permuted_negative		AGCGGATCCGTGCTGCTCCAGTCAGACAATTACTCAATACCCTGTCTGCC
ILMN_1379335	002370441	negative	permuted_negative		ACAGCTGAAGCCGTCCCATTCCGTCTGAATCACCCCGACCCACTGCTTGT
ILMN_1378510	006420767	negative	permuted_negative		TCACTTGGCCCCCACGACTAAAGTCATCTGAAGACGGCATGTCCTCGGCA
ILMN_1378653	005550132	negative	permuted_negative		GATGGAGAAAGGGATAGAGCCGCACAGCTAAAGCCACCCATGAAGCCACA
ILMN_1379237	002350400	negative	permuted_negative		TTCAGAGAGAACCATCCTCTATGGGGCTTCAGCAACGAGGACCACCACCC
ILMN_1379141	003890598	negative	permuted_negative		AGCTTCGATTGAGGGATGCCCCTGTCCAGAGTTGCAGGCCAGAAGAGGAG
ILMN_1379179	000990482	negative	permuted_negative		GAGATGAACTATCTGGAGGTTAGTTGAGACGACCCCGCCTGAAAGCGCAG
ILMN_1379005	002360367	negative	permuted_negative		ATGAAGTATCAGCCAAGCCCAGGTTCCAGCAACGGATATACACAGACCTG
ILMN_1379128	001940286	negative	permuted_negative		CTCTTGGTGTGATGGTCACCGACTGGTGCACTTGGAGAATGGTGGGGAGC
ILMN_1378958	004480273	negative	permuted_negative		CTTCTCTTATAGGGTGAGCCGTGGAGGCCCTAACTTCTCTCCAGCTTCCC
ILMN_1379125	000730767	negative	permuted_negative		GGATGTATGCTGGAGCTAGCTGTACAAGGGGCGTAGTCTTAGACGATTCT
ILMN_1378520	000520008	negative	permuted_negative		CACGGCTCGTAACCCTGAGTAAGGGGAAGGCCACTCAAAGCTAACCGGCA
ILMN_1378657	006620491	negative	permuted_negative		GGGAACACCCGGGCAAGAGTACCGGATGCTGAAAGATTTGGTGCGTTTGT
ILMN_1378860	002230414	negative	permuted_negative		CATACAGAATCTGGGGAAAGACTGCAGTGGCCCGCCCCGTGGTGTTGAGA
ILMN_1379245	006200411	negative	permuted_negative		GCGACACGGGGACGCGGAGTGTGGTTCTCTGTCGTATGTGTTGTGGTGAA
ILMN_1379038	004640431	negative	permuted_negative		TAAGGTCTCCAGATTGTGACACTCAACTGCCAACCCAGGACCCAGTCCCA
ILMN_1378855	002340129	negative	permuted_negative		GGGCCTCTGTGAGGGGGATGGTGCCCGTTGGTCTGAGGATGAATAGTTGA
ILMN_1378870	000130685	negative	permuted_negative		CGCGAGGCTATGAGAGAATGAAAGCGCTGGTGCTGACACAGGGTCTGAGC
ILMN_1378616	004850372	negative	permuted_negative		CAAACCGTACTCGAACAAAAAGGGGGCTAGGTAGTGGTCCTAGGAGATCA
ILMN_1378659	006840100	negative	permuted_negative		CAGGCTCATGGGTTGGTGGCTGCGCACAAACACCTACGCCGCTACCTAGG
ILMN_1379350	000610653	negative	permuted_negative		CCCCCCACTTTAGAGTTCGACCCCAGTCAAGGAACCAACAGCCCAGGAAC
ILMN_1378618	002060736	negative	permuted_negative		TCTACCACCTCGCCCAAGGGACCCTGAAGTGAGAAAAGTCATTGCCAATC
ILMN_1378535	004150630	negative	permuted_negative		AGTGGAGCCTTTTGGCAGGTGCCTGGGACAGGACGCTGTGGACGTACGAA
ILMN_1378908	007650292	negative	permuted_negative		GAGCTTTCTCACCTAGGGAGGTGCACGGCCTGGTCCACTCACCTCATACA
ILMN_1378516	005810605	negative	permuted_negative		TTAGACCAGCACCCCGTTTTGTTTAGCCTAGATGTCAGTGGGGGCGGACT
ILMN_1378848	003440025	negative	permuted_negative		CTGATGGCCACTCTGCTTATCTCGACAGATGGTGTCAGGGTACACTGCAG
ILMN_1378895	000110221	negative	permuted_negative		CCTTGAGGGAGAGGCAAACCTAAACGGGTTGAGTACCCGTTCGCGTTGAC
ILMN_1379175	006840630	negative	permuted_negative		TTGCGGGCACGCACTTGTCCTATGCTGTTGCATCACATTGGCCCAGATCG
ILMN_1379015	002710608	negative	permuted_negative		GGTCAGTAGAGCGGAGGAGGAACTCAAGACCTGTTCAGCCAGGTCAGTAC
ILMN_1379130	005340192	negative	permuted_negative		GTCTCAACCGCTCCCATTTACGCAGCTTCCTATATAGCCCAGCTAAACCT
ILMN_1379154	002600092	negative	permuted_negative		TGACTCACAAGGCGGCTCCTGTCCGTGGCAATCTGGTGGTTATCAGAACT
ILMN_1379088	003420647	negative	permuted_negative		ATCAGCTGGACCGTGCCCGGGAAGAGCTTGCTCAATGCGAAACTGTATGT
ILMN_1378704	006100441	negative	permuted_negative		AATCCTCAACGTGTGGAGATCTTACAAAGGGTCCCTGCTGCCCAATGTGG
ILMN_1380400	004150360	negative	permuted_negative		GGAATGAAACCATGTTAATGCTGCCCGTCTGATGGAAGTGCGCCCACCCG
ILMN_1379260	006550333	negative	permuted_negative		TACCCGGGATGTATACTAGCCCCAGAGGCTAATGGCCAGAGCTGACTCTA
ILMN_1379116	005960184	negative	permuted_negative		AAGAGCATAGTAGAGCCGCTGGGTGTGTTTTGGTGTGCAAGGGGCCGCTC
ILMN_1380420	005490070	negative	permuted_negative		GCAGGAAGGAGAGGGCAGATTGTAGGGGAACTGAGGGGAGAAGGCCCATT
ILMN_1379023	003940386	negative	permuted_negative		CGTGATACGGCATGCTTTCGGCCCTACTATCCACCGAGCACCAGGTGATA
ILMN_1378743	002370333	negative	permuted_negative		AGTGGACCTGTCGGGACCAAGGCTATCATTGGTGACAAAGTTGTGGGTGA
ILMN_1379060	003120192	negative	permuted_negative		TGTCTCCTGCTCCACTAGAGGGAACCGATGTCTGCAGCATTATCAAACCT
ILMN_1378819	002370730	negative	permuted_negative		AACCAGTCCCGATGTCTCGGTTGTCTCCACTCGGCGACACATACTACGAA
ILMN_1380382	002260154	negative	permuted_negative		CTATTGAGAGTTGGTCTGCTGGGGACGTGATGGAAGAGGGGCTGTGACTA
ILMN_1379034	001030592	negative	permuted_negative		GGAAATTGGGGACTAGCATGACACCACCAACTCGCTGACCCAAGAGCGCC
ILMN_1378810	006960594	negative	permuted_negative		CACGACGAACTAAATAACCGGAGGGAGACTTCGCACCCCCGTTCACACAG
ILMN_1380296	007550386	negative	permuted_negative		ATGTTACCACTGCTGGCCATGGCCTGCTCGGACTATCTGTTTCAGGAGCT
ILMN_1380376	005810368	negative	permuted_negative		AAGTCTTCACCCTGGCTGGGTTCGATGTACCCTTAGGAGCCTGTAGAAGA
ILMN_1378823	003310524	negative	permuted_negative		CAAGCCGACCGTTCATGGAGTGATACCGAGAGGCCGATTTGGCCCCCGTG
ILMN_1380266	006590593	negative	permuted_negative		GCCGAATAGGGAGCAAGAGAGGGGGAAGATCCAAGAGAACTGGAATCGCG
ILMN_1378851	005220309	negative	permuted_negative		GAAGAGCTGGTTATCGAAGCTGGGGAGTCCCTGCAGGAGAAGGGTTAGCA
ILMN_1378901	007380333	negative	permuted_negative		CCAAGGTGCGTTGGTACGTGGCAAAGTGAATCGGACATCAGGTTAGGCCA
ILMN_1379201	001170176	negative	permuted_negative		GCTAGCTCCCGTCTTGTCATCTCCTGTCAGGTGTGCACCATTGATCAGAC
ILMN_1379282	006040670	negative	permuted_negative		ATCCTAGACATGGGGCCTACTGCACACTGTACTGGACACTGCTTCAATGT
ILMN_1378924	001500022	negative	permuted_negative		TCTGCCCTAGAGAGACAAGAGAGAACGCGGAAGATCGTAGATCCGAAACA
ILMN_1378962	001570376	negative	permuted_negative		AGGTGATGTCCTGCTGAACCACCGCTTGTGGTTCGTGATGCGAGCGAGAG
ILMN_1378749	004780601	negative	permuted_negative		CCCCACGTGACGGAACAAGCCGCACTAGCATCATTCTCGCTGGACCCTTT
ILMN_1343049	002900458	biotin	phage_lambda_genome		CCATGTGATACGAGGGCGCGTAGTTTGCATTATCGTTTTTATCGTTTCAA
ILMN_1378881	007100689	negative	permuted_negative		GGTAGACAGTGGTCCATCTTGGACAAAAGTCCAGGAAGTGACCCACGAGA
ILMN_1378700	002630152	negative	permuted_negative		CTCCCTTCTCTTCAGTGTGACTGACATTGTTTCGAGGCTCAAAGGCAGCT
ILMN_1379292	002630056	negative	permuted_negative		CCCGAGGTCATGGTGTCTAAGTAATGAGTGACGGCTCTCTCTTCTGGGCA
ILMN_1379093	005550017	negative	permuted_negative		CGGCACACCTCCCAAAGAACACCAGAATCCCAATCCAGCTCCCAAAAAAC
ILMN_1378949	006860364	negative	permuted_negative		GAAGAACCTCTGCTTGAGGCCGGGACGTGTGCACATGAACGGTGGACTGT
ILMN_1379343	007560280	negative	permuted_negative		GGCTAGGCATGACCTTATCCCGGGAGAAAGGACACTCCCTTGTCTGAAGA
ILMN_1380399	005820220	negative	permuted_negative		ACTTTCTGACAACAGGGGTCCGCCGCATGCTGACTAGACTTGCGGCCCAA
ILMN_1378928	002370139	negative	permuted_negative		CAGATACATACACTGCTCGGGGTCTTGTGCTCGCATCTGGGCCAGCTTGT
ILMN_1379215	000630491	negative	permuted_negative		CTTGGGAAGGTAGCCCAAGAAAGGGAGTGATAATCAGTGGCGGAGTGCCG
ILMN_1378733	001710376	negative	permuted_negative		ACCACAAGAGCAGCTCCCCTAAACAGAGGCCATGCGCTCACACATAGGTC
ILMN_1378757	002060468	negative	permuted_negative		GCGCCCTGGACACACGGGTTGTGAATGATCGAGTGAGGGAGTTAGAAGGC
ILMN_1377924	005870154	housekeeping	housekeeping	GI_6679936-S	AAGGACACTGAGCAAGAGAGGCCCTATCCCAACTCGGCCCCCAACACTGA
ILMN_2588056	006940475	housekeeping	housekeeping	GI_6679936-S	GCCCTATCCCAACTCGGCCCCCAACACTGAGCATCTCCCTCACAATTTCC
ILMN_1378513	006650605	negative	permuted_negative		GCAAGCATGATCTAGCACTCCCCCTCGCATCCGGAAGCAGGTAAGAACAA
ILMN_1379085	004670398	negative	permuted_negative		ACAGGCACCCTTGTTCACAATCTCACCGAGTGGTTGTACACAGCGGTTTC
ILMN_1379067	004730059	negative	permuted_negative		CCAGGCGCTAGAAGCCAAGGCGTTCTGGAGATGCACAAGGGCGAGAAGAA
ILMN_1379026	006420402	negative	permuted_negative		AAACGTTCCGAGCTGGTCCTCGCCATTACCATCAGTTCGCTTGGGTTGCT
ILMN_1379315	006290091	negative	permuted_negative		TGGTACTCGTGGGCTACAGTGGGTGTCCAAAAGCCACCTGACCTAAGAGA
ILMN_1380434	000270672	negative	permuted_negative		AGACGTCTGGTCGCACTGTCCGGCCTTGATCTGACACGCCAATGTATTCA
ILMN_1379019	005900093	negative	permuted_negative		GCATCAGCAGGGGTTGGATCGTGAAGTGGAATTAGCTCCGGCAAGCGGAG
ILMN_1378836	002120608	negative	permuted_negative		CAAAGGCAACTGGGCCCTGCACTACATGATCCGACCACTGGTCCGTCCAT
ILMN_1380409	003890593	negative	permuted_negative		TAGCGTGAGGCTAGCAGCGTATTACCTAAGAAACTACCAGGAACAGTGGC
ILMN_1378898	001230601	negative	permuted_negative		CTGTGCGCACTGGCTTTAAAGTCACCTGCGCTTGGACCTTACGCTGGTCC
ILMN_1380387	004640048	negative	permuted_negative		AGCGCCACCACAATAGAAGAGGGAAGACTGTAGTGGAGGGGTTGCAGGGA
ILMN_1378512	000460458	negative	permuted_negative		CCGCGCTTGTCCTTTGGGTGGCTTTCGGGTTTGGGGTGTTTCCCGGCTTT
ILMN_1378842	001850148	negative	permuted_negative		GGAGAAGAGGTAGGGCCAGACGACCTAGGAGCGATGCTCAAGAGTGATCC
ILMN_1380304	003850608	negative	permuted_negative		ATGTGTAACGAAGGGTCAGGGTCAGGCAGCCGAACAAGGGATGTGGGATA
ILMN_1379092	002570438	negative	permuted_negative		GTGATCGAGTTGAAGCAGAAGTACTGGGCAAGCCAGGCTCTGCAGTGGGC
ILMN_1378632	000060201	negative	permuted_negative		AGTCCTAGGGCACCTCCCTTCGGTGACCACACGAGAAATAATGGGACACT
ILMN_1379182	007400465	negative	permuted_negative		ACCTATTGCCCAATGCCTCGGGCCTATGTATGGTCGGCTTGCCTATGGGG
ILMN_1379296	006100397	negative	permuted_negative		GCACTATCTTCCCTTAAAGTATCGTCGAGGGTGCACACGTTCGCTGTACC
ILMN_1380404	003120376	negative	permuted_negative		AAAGCGCAGCTCCCACACTCAGAACCAGCGAACAAATATCCATCCAGGAC
ILMN_1380282	004780279	negative	permuted_negative		TGAAGGAATTGCACCGCCCTGTGAGGGATACTGGACCAGAACAAGAGCCC
ILMN_1380271	003460484	negative	permuted_negative		TGTTCTAGCGGGCGTCTAACTCTTTCCTGTCAGGCGTCATCAGATGTCTC
ILMN_1378802	005890717	negative	permuted_negative		GGCGAAAACGAGGAGGGCGGCTCAGACATGGCTCCAGAGTTTTTAGTCCC
ILMN_1378583	003940324	negative	permuted_negative		AGTAGGCACCATACCCATAGTTAACCCTGAGGCCAGGGTACCTCGGGCTC
ILMN_1379224	007150619	negative	permuted_negative		CTCGGCAGTATGCCCACATTTAGGTAGACACCTCTCTTACTCGCCCCGAA
ILMN_1378720	003800653	negative	permuted_negative		CTACTTCCGGTGGGTTGTAGCACTCAAAGTCGAGTTGCGGTCCAAATCCA
ILMN_1378714	001570341	negative	permuted_negative		GACGCAAGCGCCTAAGCCGCGCAGAAATTGGTTTGTCAGGGTCTTCACGG
ILMN_1379326	000650014	negative	permuted_negative		CATCATTTCCGTCAAACGCCTCTCTGTTCAGGAGACCCGACTGAGGGGCC
ILMN_1378874	001070386	negative	permuted_negative		GGAGATTGATGTAGGCCACGCGCCATTGGTATTCCTTTCTATCCCAGCAA
ILMN_1378793	004050364	negative	permuted_negative		GTCACTGAGCCAGTGCGACTAGCGCCATGTTTACATTACTTACCTTAGCG
ILMN_1378755	005720369	negative	permuted_negative		AATGTCCTAGAGAAATGGAAGGCGAAGCAGAGGCACGCAAATCCGAGGCC
ILMN_1379144	003830609	negative	permuted_negative		CAGGGAACTCCTCAGACAATGGCCAGGAACACTATGATCCCGTTTTAAGG
ILMN_1378670	006270300	negative	permuted_negative		GCTCCTCTTGCAAGGACACCCCCTATTGCGGACAATGATGAGGATTCAAA
ILMN_1379268	001450280	negative	permuted_negative		CCCGTGGCACAGCAGACTGCTGCTGACATAGAGGCTGCAGGGGATAGTAT
ILMN_1379332	003870433	negative	permuted_negative		CTGTTCTACCTGGGCCTCCTCGCCAGTATCTGAGCTGTGCCGCAGATGAC
ILMN_1380452	005420341	negative	permuted_negative		CCCGCTTGCTTCACAAAGGTACTGCGGTGGAAGGGCCGCCGTTCTGGCAT
ILMN_1378558	006110682	negative	permuted_negative		GAGCGTCTTCGGATGGGTACCAGAGAACTCAGGGATGTATGATGCCTACA
ILMN_1379165	005130739	negative	permuted_negative		CATCCTCGCAACGGGTGCCATTCCACACTACCAGCTCTTCAAATGCCACC
ILMN_1380267	001050110	negative	permuted_negative		CTGCTCAGAACTGCTTCAGGAAAGGTTGGGGCCAGAATGGAGAACTGTTC
ILMN_1379002	004230025	negative	permuted_negative		AGCCGGGCTGCTGGCACAATGGCAGTTTGGAAAAGCAACCCGAACTTACA
ILMN_1379302	006480014	negative	permuted_negative		ACATACAATTCGGACCCTCAGTGCAACAGACAGGCGTGCAGCCTTCTAGC
ILMN_1378506	002940008	negative	permuted_negative		GAGGATCTCGAATGAGTCTCATGTGGGGGCATGCCCATCCATGGGAGCCG
ILMN_1379309	001070132	negative	permuted_negative		TCTGGTGGCGGTATGGGGGGTAACTTAAGCGCGGTAAGGGCAAAGGAGCT
ILMN_1379372	004610561	negative	permuted_negative		GTGTCACCTCGACCACCGATGGCAGACAATCCTTACCACTAAGTCCTTCT
ILMN_1379322	007330056	negative	permuted_negative		AGTAGAAGACACCCTTTTGTTGCCAGGTGGCCGGCTTCTACATTGGAACG
ILMN_1378562	002600682	negative	permuted_negative		AGCCTCTTCAGAGGATTTGGATGTGGAAGGGGGCTAGAGGCTTTTGGTCC
ILMN_1379061	004890609	negative	permuted_negative		CAGATATTTTGGCTGCCGTCTGGAAGGACGGCTGCTCCGAGTGGTGATGT
ILMN_1379148	006900324	negative	permuted_negative		AGCCAACCTGTGTCCAGGTACCAAGATCACACGGACACTTTCCCAGATCC
ILMN_1378642	006180600	negative	permuted_negative		GTGTCAGGAGCTTTCCAGCTGGGACAGGATAGTGGGGTGCAAGGAGGTTG
ILMN_1378998	001580367	negative	permuted_negative		GCTTTGACAAGTCCACCCGGCGCCTTGGTTGTTTAAAGAAGGTGGTTGGT
ILMN_1379265	004540706	negative	permuted_negative		GGCTCAGGACTCGAGAGGTGAGCTTAGCATGGGTGCAGAATGAACTCTTG
ILMN_1379205	005310246	negative	permuted_negative		GAACTCGGTTGATCGCCTCGGTGCAGGTTGCCCTCAGCCCTCTGGAATCC
ILMN_1379111	001690133	negative	permuted_negative		AGGTCTAGAGGCGCATCAATTGCAGGTACTCCCATGGTCAAAACGAACCC
ILMN_1378775	000630603	negative	permuted_negative		TCCCCCAAAAGGGCCTTGCCATCCCATATGTGGTGCTGTTAGAACGATTG
ILMN_1378695	000060241	negative	permuted_negative		CTGATTTCTTCAGGAAGAACACTGGTCCGTCCAAGAGGCCAAGGCCAGGG
ILMN_1379172	007040240	negative	permuted_negative		AGGTGCACATTCCAGATCACACCAGGTACCTCAGGCATCACCTTAACAGG
ILMN_1378543	004900768	negative	permuted_negative		CTACTTAGACCTCCCATACCTCTAAGTGAACCACCGGATAGCGGGGGCTG
ILMN_1379189	002970372	negative	permuted_negative		TGCGGGTAGGAGGCCCCTGTTCTGAAAACCTGCAAGCAGAGCTTAGCTGA
ILMN_1379065	004040403	negative	permuted_negative		GTCGCCTGGGAAGACTGTTCTGCCTGTTATGCGAAGCATGCTTGAGTCGC
ILMN_1378509	004490292	negative	permuted_negative		GATCCGGCTTCCGCTGCAAAATTACCTATCAGTTGGAGTTGTGCGCTCTC
ILMN_1378883	003060026	negative	permuted_negative		CAACGAGCATAGGTGAGAGGCCCGAATGGGGACAAAGCGGGGATGAAACA
ILMN_1378893	004230544	negative	permuted_negative		GGGCCATTATGCGTTCAACTTCCAGGTGGAGATTGGAGGCTCAGAAACAG
ILMN_1378907	006350008	negative	permuted_negative		AAGCCAAACGGCCCCGATTCAGACCAAAGGAGCTGCCAAGGTAATGGAAA
ILMN_1378663	005890561	negative	permuted_negative		CGGCATCATGTTCATACTCCTGCCTCGTTGGGGGCAACAACTTATGGCCT
ILMN_1378781	006650497	negative	permuted_negative		AATCCTCAGAAACCACAACCAGTGAGCCCGACACACCTAGCCTGGAGCCT
ILMN_1343050	000730475	cy3_hyb	phage_lambda_genome:low		CCGACAGATGTATGTAAGGCCAACGTGCTCAAATCTTCATACAGAAAGAT
ILMN_1378869	001300575	negative	permuted_negative		TTCGCCTACACCAGGTCTTGGGCTTAAGGCGGGTAAAGGGGTCATTCGTA
ILMN_1378637	002630280	negative	permuted_negative		GGTAGGAGGTAGTGGGAACCCGCTCAGTTGCACCCTGAAATGAGAAGTCA
ILMN_1380312	002940187	negative	permuted_negative		GTGGGTAGAGCTCCAAGGGTGGAGAAAGACAACCTCAAAACTCAGGTGGA
ILMN_1380281	002190463	negative	permuted_negative		TCGGAACAAGACCGCGAGCTGACCTAGGGCAGGAATAACGCGAAGATCCC
ILMN_1378865	005570386	negative	permuted_negative		CTTGCTGTACCAGGGGGACTCTCAGGTGTAAGTGTAAGTCTATCCACGCT
ILMN_1379137	000620224	negative	permuted_negative		CCTAGGCAGACCGTCAAGCTATCTGGGGACAAACTCTGCATGGGATGTGG
ILMN_1378568	003190521	negative	permuted_negative		TGCACATAGTCCCTGGCACAAGCATAACCCCACCCGATGCCGGAAATATT
ILMN_1379087	001820747	negative	permuted_negative		CAACCAAGTGGCCAGAGAATCGTCCCAAATGTCCCCTTTGCGTGTCCCGC
ILMN_1378515	002140577	negative	permuted_negative		CGTCATTCGTAACAAGGAACTAGCTGGACCTGTGCGTGTGCCCCGTGATG
ILMN_1378944	000240368	negative	permuted_negative		CAGACCAAAATGCACAACATGACCACCTGTATGCTCCCCTGTATCAGGCA
ILMN_1380421	001260762	negative	permuted_negative		ATTAGGTTATGGGGCTGTCGGAGGGGGGGTGGCGTGAGAAGAAACAGCAC
ILMN_1379293	004010100	negative	permuted_negative		AAGGATTCCCACGGGGGGCAATTCCTACAGGTCCCAAATCCGACAGAATG
ILMN_1378798	004210010	negative	permuted_negative		CTGCCTAGGGGCAAGTTGCTGGAAGAAGAGCCCACGACTTGGCTTAGCCT
ILMN_1379230	001410400	negative	permuted_negative		AAGACTGTTTCAGCATTCTACTGTGCTCCGTGCTCAGGCGGTCTCCAAGG
ILMN_1379244	005390139	negative	permuted_negative		AACTCGGCAGAACCCCCACAGGAGCACCCATGCAGATGCCTTTGTTGGAT
ILMN_1378955	004220201	negative	permuted_negative		GAAGTCGCCAGCTTGGGACTACGCCACACGCTGCACAAGAAACAGGAGTC
ILMN_1380441	006350184	negative	permuted_negative		TTCACATAACGTCTCGTGAGGCCCCAGGTAAGCTGCTGCCCAAGTCTCTT
ILMN_1379316	005560390	negative	permuted_negative		CTGCCTTATCTTGGGACCTGAGCGACGGACCATCTTACTTGCAGCTCCAG
ILMN_1380412	002650484	negative	permuted_negative		GCATGCGAACCAGACCGACGTAAGTTGCACATGCTTGTGGAGCGGCGGAA
ILMN_1378939	004540280	negative	permuted_negative		ATCGGTCACGTGGGACGGAGCCTGAGCTCAGAAGGTTGCATTTTCCAGAG
ILMN_1379024	003450129	negative	permuted_negative		AACGAATCGACACTGCATCCCCAGCCGGGCAACTTCATAAAGTGTGCAGC
ILMN_1378959	003360110	negative	permuted_negative		AGTTTCCTTCGGTGCGAGCGTAGAGGCCTTTAGACGTTGTCCATACGGAT
ILMN_1378816	003870064	negative	permuted_negative		GGATCTCCATTGGATTAGCCACCATTCACGCTCCCTTTCACCTACCGTGG
ILMN_1379256	003870075	negative	permuted_negative		GCATGGCTAAGGCGAGAGTTGAGGGATAGGGGACAGTTGCCGAGACTATG
ILMN_1380438	003390402	negative	permuted_negative		GAATAGCATTGGCCGGGTGTCGCGATCAATGAGAACTAGGCGGTCAGGAA
ILMN_1379124	002900167	negative	permuted_negative		ACTGATATTAGCGGTCCACTGTGCCCTCTTTTCCATAGAGCGAAGTCTGC
ILMN_1343060	000940722	labeling	trpF	trpF	GGTGATGAAAAACCGGCGGATGTCGCTGCTCTTCGCAAGCTGACAGGCTG
ILMN_1378752	004760390	negative	permuted_negative		GGGTCAGGTATCAGAGGAACTGGGCGACCATTCGGCAGACGTACTTTGGA
ILMN_1378717	004050411	negative	permuted_negative		AACCTATCCGAGGCCTTCGGCAGAGGAACAACCACCAGCCCAAGATCATC
ILMN_1378854	003840193	negative	permuted_negative		CCTCTATGACACCACCATCAGCAAGGCCTCGAGGGGGCCTTTTCCCCACT
ILMN_1378861	005360164	negative	permuted_negative		GAAGCCATCGGGGGTCCACATTGTTGCCGGAAATTTGATGTCTGCTTCCC
ILMN_1379107	003710341	negative	permuted_negative		GACGGCGGCTGTGTTCCCAACGCAAGTATAGTCACGCTGAAAGCCTTAAA
ILMN_1380408	001070278	negative	permuted_negative		GAGCTACAGCCCGGATTCTGTGCCTCCTGCAGTTCAGTGTATGTAGCTCT
ILMN_1378916	004490196	negative	permuted_negative		TATGTCCCGAACATCGCCGCAATTTTGCACGCGCTGCGTTCGTCGCCATC
ILMN_1380388	005870228	negative	permuted_negative		AGCTTGCAGTTGCAGACACAGACCTTCCCTGGAAGGATGACGAGTGCGAT
ILMN_1378501	007650601	negative	permuted_negative		CAAAAGAGCAGGCTAGAGAACCGATTAAGGAACAACCCGCACAAGAACCC
ILMN_1379344	001450326	negative	permuted_negative		TGGAGGGAACCACTTGTACTTTCTTTGCACCTGTAGCGTTCTTCCACTCC
ILMN_1379096	007040274	negative	permuted_negative		ACCAGGTGGGACGGTCCCACAGGATTGATGTGTAGCCGTGACCCTGTAAT
ILMN_1378896	002360048	negative	permuted_negative		AGTAAGTCCAGGCCTTTCCAGGGAAACAGGGGAGCAACCTTCTCTAGTTG
ILMN_1378727	006400215	negative	permuted_negative		TGTCTGTGTGTCGAACCTGTGTGCACGACTTGGGTGGCCCGGTGAACTTT
ILMN_1379214	003170674	negative	permuted_negative		AGCCCAACCCTCGGGTCACTACCACCCCCAATTTGGCAACTCACGTCCAT
ILMN_1378774	003170564	negative	permuted_negative		TTTTAGTGACGGGCCCTTATGGGGCCGCACCTGAGGTTACTAAGCCTGTT
ILMN_1379152	001470296	negative	permuted_negative		CCGAATCTGTGAGGTCCTCCGTGTGACGCTCGTCTAGATGCTGTGGGCAT
ILMN_1379307	003460315	negative	permuted_negative		ACCACCCTCTCAGGGTGGCTGGCGAATGGCTCACTTTTATTGGATGCGCA
ILMN_1380290	000650148	negative	permuted_negative		AAAATCGGTACTGAGTACTGCGGCCATCTGTTAGGTCCACACTCGTGGCC
ILMN_1379103	005420129	negative	permuted_negative		AGAGGGGACATAGCCAGTCAGCCCACAAGGCCTGGTTTATAGCAGTGCAT
ILMN_1379241	004920390	negative	permuted_negative		CCGGCCCACTCAGCCCCTGAAAGGCACTTCTTAAAGAAGCGCAACGCCCT
ILMN_1379280	006860239	negative	permuted_negative		GTTAGGCAGCAGAGAGACACGAGAGCCTTGGAATCAGAGAATTAGCTCCC
ILMN_1378969	002230673	negative	permuted_negative		AGCACATGAATTGCCCGGTGCACTCACGGAGGAAATCAAAGACGAGCTCG
ILMN_1379033	006420634	negative	permuted_negative		CCACTCGGTCCTCCCGTACCAAGTCAACGAGTTCAATCAAACAAGCCACG
ILMN_1379167	003610647	negative	permuted_negative		GAGACCACCTGCTGCAGCCCAATACCCGCTGAACTGTGGTTGCCATGGGG
ILMN_1380426	002760082	negative	permuted_negative		GAATAATGCAGCGCCGGCTGGCCTTTTGTGCTGACAAGGCTTACGAACGT
ILMN_1378602	005670307	negative	permuted_negative		GGGCCCGAGACACCGTGACCTACAAAACCGCTTTAGATTAGGCAGTAGTT
ILMN_1378918	005420196	negative	permuted_negative		GCACCCGGGTACCCTAAGGAAGGGAAACAGAGCATCAATGACGAGTGTTA
ILMN_1378517	002260128	negative	permuted_negative		TGTGCAGTACACCTGTGCAGTCGAGAGCCTGATGCCAGTCACATTGCTGG
ILMN_1378850	007210707	negative	permuted_negative		AAAGGTCTGGTGCAGGGCATGATGACGTCAGTACGCAGCTCTGTACAGGA
ILMN_1378690	006040669	negative	permuted_negative		AACCTTGGGCTCGCGTTTTCGTTTGCGGCGACCCGGCCTTTGTCTCGGGT
ILMN_1380391	006280360	negative	permuted_negative		GAACTGACTGGCGCGCCAGGAACCCAATCTCGCCAGTTCTTCTCGTTACA
ILMN_1379200	006520482	negative	permuted_negative		CACTGACAACAACACTTCCCGAAGACAAAGAAGCTGCCAGGTGCCCGGGC
ILMN_1378550	000050647	negative	permuted_negative		TGATGAAGCCAGATCAATCCAGCTCGTTCTGGGGGAAGCCCTGTAGGGCG
ILMN_1378533	000730577	negative	permuted_negative		CTGGCTCTCGACGCCGATGTCAGGGTCTTGTGGTATTGGACGCTGATCTC
ILMN_1379077	001260017	negative	permuted_negative		TTGGGACTACTGAGGTCATTCTGGCAGGGCTGCCATGGCCAAAGCTTCTC
ILMN_1378610	005820692	negative	permuted_negative		ACTCAGCACCATCTCGGCAGTTTGGCCGTTCCGCCCTATAGGACTCAGGC
ILMN_1378724	005560280	negative	permuted_negative		CTGGAGCTCATCGGGCATGGCACCCAGAATTTGGCACACCACAAGATACC
ILMN_1378660	006770477	negative	permuted_negative		TAACAGCATCTGCACGTGGCCGCGAAGGGCACGAATGCGTTTGAAGGAGA
ILMN_1343048	007200743	biotin	phage_lambda_genome		GAATAAAGAACAATCTGCTGATGATCCCTCCGTGGATCTGATTCGTGTAA
ILMN_1378963	003840064	negative	permuted_negative		GGTTGCCCCCAGGGATGACCTGGTATTTAGACCCAAAAGATTCTCAAGCA
ILMN_1380411	006580386	negative	permuted_negative		ATCAATTGGGGACCCTCCGCTAAGTTCATGGGTTGACTTGCCTCTCTTAG
ILMN_1379118	003130402	negative	permuted_negative		CATCTTCCGCCAAGCGAGGTGAGTTGCGCAGTCCAACCTTTGACGAGGGC
ILMN_1379262	001990441	negative	permuted_negative		TTTTGGGAGGGAAGATTTCCCCAGACCACGTCGGAGAGTGTGCTCCTGGC
ILMN_1378936	006550064	negative	permuted_negative		TGTGACAGAAGGAGGGCCCGGAACAATGTTGGCCAGTGGCCCCTAAGTGT
ILMN_1378628	003830634	negative	permuted_negative		CTATTGTCCAGGTCACTTACCTGCGGCTTTGCAGACTCTACAGACAGCCT
ILMN_1343052	005820544	cy3_hyb	phage_lambda_genome:low		TCTGTCACTGTCAGGAAAGTGGTAAAACTGCAACTCAATTACTGCAATGC
ILMN_1380442	007650402	negative	permuted_negative		AATCACGTGAAGATGCAGCTGCGCGGAGCCTGATCCAATGCCCGCTAACA
ILMN_1378747	003290369	negative	permuted_negative		TTCGGTTCTCTTACCCACCAGTGGAGCATTTCGAGCGCCGTCAGGTCCAC
ILMN_1379218	000620056	negative	permuted_negative		GAAGAACCTAGCAGTCTCGGCAGGGCGGTGGCAAACCATAAAGAGAGTGC
ILMN_1379253	002490669	negative	permuted_negative		GTGTCAGAATCCTGTGTATGGGGAAGGGCCAGCAGGCAGCACTTTACCTG
ILMN_1379066	000050475	negative	permuted_negative		AGCAGTCTTGGTAAGAGGGGAACGGGCAGAGCCAAGCGCAGAGGTTCGAG
ILMN_1380393	000010343	negative	permuted_negative		TCCGGCCGCCATTTCGTTCTCTTTTTCCTGTGCGGAGTGGCCCATGGTTG
ILMN_1378598	004640066	negative	permuted_negative		CCTGGAACTGGCCTTTCCTCCTCAACTTCAGTATCTGGCCGAAGCCATGC
ILMN_1378853	001570193	negative	permuted_negative		TGTAGAAACAGCCTGGTGCGGCGCCTCCACCTAGCGGGGTAAATGACATG
ILMN_1378648	003420288	negative	permuted_negative		TGGAACTGGTCACGCCTGTGGTCTTAAGCTGGACAAACCACACGCGGACA
ILMN_1378777	000020445	negative	permuted_negative		CTCGGTTCAGACGTGAGGAGAGTCAGTATACAGTTCGTACCCACAGTAGA
ILMN_1379160	007160398	negative	permuted_negative		ATTGAGCCTCGGAGCGAGCATTGTCCAAACCTAGAGCATTTCTCTTCCCT
ILMN_1380316	006420592	negative	permuted_negative		GAGTCTCGGACTGAAGTCGTCACGGTGGAGGAAGGCTCAAACAGATGAGG
ILMN_1378503	005900292	negative	permuted_negative		TGAATTGGACTGCTACCTAAAAGCATACCGAACCGGCTATGGTGTGTGGC
ILMN_1378820	006550068	negative	permuted_negative		GTAGGAGCAGTCACCACCGGGACGGACCCACCCGGTCCTTAGCTACTTGA
ILMN_1378807	000770730	negative	permuted_negative		CTCGGGCGCTGTCCTTTCTCCTTTACAGACAGCCCATGGAGTGGAGTCTT
ILMN_1379123	007200343	negative	permuted_negative		CGTTCGATTACACCCTGAAGCACTAGGCAATGAACTGCCTGAAAGAGTGC
ILMN_1378947	000380364	negative	permuted_negative		GTCTGTCTTCTAGCCGGACATCACCTGAGACTCAATGAGGCGAATGACCA
ILMN_1379209	006760037	negative	permuted_negative		AACTCCGTATGAGTATTGTCAGGGAAAGAGGGACGCGCCATGCTAGTACA
ILMN_2038779	006180066	labeling	lysA	lysA	GCTTCCCGTTACGGTTTTGACATTCCGGAAATTTGGATCGAACCGGGCCG
ILMN_1379288	004570270	negative	permuted_negative		GGGAACCAAAGCGATACCTGCTTACCTCTCCCTCTACGGATGAGGGCACT
ILMN_1379195	005720274	negative	permuted_negative		TGTGAAGCATTCGGCACTGGCAAGCTGACGGAGGGCTTTCTTGCCCTGCA
ILMN_1379011	004260070	negative	permuted_negative		AACGCAACTACCCTCACGAGATCAATTGGGCTACCAGGAGGCTCCAGCCA
ILMN_1379301	007380707	negative	permuted_negative		TGGAACACACTGTAGCTGGGCGGCAGGCCGGGCAGATTAATGGGTAAACA
ILMN_1378545	004890372	negative	permuted_negative		GTTCGGAATACGAGCAGGTGTTCAGGTGATTTTGACTCATTGGAGGCAGC
ILMN_1379352	002120358	negative	permuted_negative		CAGACCCGGTTGCCAATGAAATGGGAAGATGGATGGGAGGACTTGCCTGG
ILMN_1378913	002940050	negative	permuted_negative		GATCCTCGTGTGGTTGAGAGAGCGCCGTGTGTCCTCAGAGCTGTGCAAAA
ILMN_1378666	006200239	negative	permuted_negative		TGTAGCGTTAGTCCCTGATAGACGCCACCTCATCGACCACTGTGATCATG
ILMN_1378857	001110731	negative	permuted_negative		AGACCGAGAGAGCAGCATCACCGAGTTACCCTCGCATCAGTTAATGCGCG
ILMN_1378522	004640735	negative	permuted_negative		AGTACCCCCATCCTGCTTCTTTCCAACAGCAAGCCTTCGGGGGAGTCAGA
ILMN_1378794	000430161	negative	permuted_negative		GCAGACCTTTGTGGGCACCATTACAACTACATCTCTCACCTCCGTGACAT
ILMN_1380423	001580093	negative	permuted_negative		GGTGAGTATCCAGAATACGACCTCTCGCCCAGACTAAGGCCAACAGTGAC
ILMN_1378527	002470577	negative	permuted_negative		CTCCACAGCAGTCAACATCTGCACTGGGGCTTGATGGGCAACGCCACTTG
ILMN_1379084	007160719	negative	permuted_negative		TCTCTGAGCCCAAAATGACGCGACCGAGATGCGCTGCGAGATCCCTTTCC
ILMN_1378635	004560332	negative	permuted_negative		GGGTGAAAGGACCTGGAACTATAGAGGCTTCTGGCCCTATGAGTATCCTG
ILMN_1378652	002570091	negative	permuted_negative		GCTCGCGAGTCTAGGTTTCCATGAGGACAAGCGGGAGGTAGGGCGACGTT
ILMN_1378797	002350477	negative	permuted_negative		CTAGGACCAAGGGTGCAGGGATCTAGGTGTTTGACCAATATGAGAGAGAC
ILMN_1379306	001410377	negative	permuted_negative		CATCACGAACAGACAGCCCAGTAAATATCAAGAGGGTTCCGTACCTGCTG
ILMN_1379072	006900360	negative	permuted_negative		ACTCAAGCCAGGCGAACTAGGGTCCTCGGGGATGTGTAAAGGAGCAGCAG
ILMN_1379168	002570255	negative	permuted_negative		CTAGGACAGCTCTTCTGATTCAGCCCTGCAGAACTGCGCAGGTTGCCCGA
ILMN_1379032	005810020	negative	permuted_negative		CTGCAACAAAATGTCGTGATGCCTGCTACTGGCTGTAGCCCGTCTGCGAT
ILMN_1380270	004880463	negative	permuted_negative		CGAAGCGGTTGTGGCGGATGGTGTTTGACCTTTGCAGGGGTCGTGCAGTT
ILMN_1380285	005490309	negative	permuted_negative		AGAACACGGCTGCTGTCCCAACCTGTTAAAGGAGCTAAATCAGCGCCAGG
ILMN_1379129	000780343	negative	permuted_negative		TGTGAGGGGTGGGAGTGACTGCGGATTCAGGACCTTCAGGATGAAGAAGA
ILMN_1379045	002680228	negative	permuted_negative		TCACCATCCGTGCTCTAATGACCCTATCCTCCATCGTTTGACAGGGTGGG
ILMN_1379284	002850327	negative	permuted_negative		TGGCTGTGTTTTGTGCCCATCGGCAATGATGGCTCATGGAATAGCTGCTG
ILMN_1378782	001090433	negative	permuted_negative		AAACAAGGTGGCGCTAGCGCGCCGCACTAGGACGTAGCAAAAGAGTGATA
ILMN_1379258	002450445	negative	permuted_negative		TGATAGCCACTAGGACACTGCGCGAGAGCGCAACTCATGACCCTGCTAAT
ILMN_1379190	006020465	negative	permuted_negative		GGCTTTAGAGCCTTACAGGAACCTTAACCCCGGGCCCGTGAACCTTCTCC
ILMN_1378667	005080546	negative	permuted_negative		GGGTAGTTGTTACCAGGAACACTTCTCAGGTGTATCTGTCAAGGCTGCAC
ILMN_1378903	007610609	negative	permuted_negative		CATAAGGTCGGAGCTGTCCTTAGGCTCTATCTGCACCCGGAACCAGGTAC
ILMN_1380311	002100133	negative	permuted_negative		AGATCGTATCCACGGTGGCATGATCCTGGTTGAGGGAAGGATCAGTAGTG
ILMN_1379248	002490398	negative	permuted_negative		TTGAGACAGGGCTTGTTCGTGCATGTCTGTGCAACAGCCTGTGGCTGGAG
ILMN_1380264	005570593	negative	permuted_negative		AGGGAGTGGCCAGTGTGACGGAGGTATGGAGACCATGGGCTGAGAAATGG
ILMN_1378866	000290519	negative	permuted_negative		CACTTCTTCTAGCAGTGTGATGCACAGCCTTTACCGTGGGATTACCCGAA
ILMN_1380439	003850093	negative	permuted_negative		GCATTGCTGAGAATCGTCGGGCATCATCAGCATCCCAGCGCCCAAAGGTG
ILMN_1379250	006960669	negative	permuted_negative		GCTCATGCCATTAGTGGGGGTTCTTCGCCGAAACCTCCACAACGTGTCCC
ILMN_1378725	004920326	negative	permuted_negative		TGCTCCGCTAGGGAAATACCAACACCTGCACAAAGACGACACCCAGCCTC
ILMN_1378808	001190064	negative	permuted_negative		CACATTAACCCACCTAGCCAACCAGCGTGGCATTCAAACAGCTACAAGCT
ILMN_1378680	004180494	negative	permuted_negative		GTACACCTCAGATTCAGCACACTTAGCCCGAGGAGGCGTACGGTCAGTGC
ILMN_1378978	005860563	negative	permuted_negative		TGTTCTGGTCATACAGGTCCCCACTTAGGCGTGGTAACGCTGGACACCGG
ILMN_1378605	002680136	negative	permuted_negative		GACAGTAAGGGAGGGTACAACCTATCTGGACTGTCCCTGGAGGAAACGGC
ILMN_1379345	006330494	negative	permuted_negative		CTGCATTCACAACATCTGGCCAACTTCAGAGCCATAGGTATGGAGGTGAC
ILMN_1378709	007380347	negative	permuted_negative		CTGTACCATTTGGAAGTGCCCAGAAAGCCGGTTAGAGCGCGTTGCCAGTC
ILMN_1378933	000540445	negative	permuted_negative		AGGCCCAGTTAGGCCGTCGTCTGGCTATGTTTGGTCTGTAGAACGATCAG
ILMN_1378773	003990451	negative	permuted_negative		TGGTCCGGTAAGCTGTAAAAAAGACATCCTGGTGCTTCTGAGCCATGCGG
ILMN_1380379	002750681	negative	permuted_negative		CCCTTGGAAGTGCGTCAGTGATTAACTGCCCTTGAGTCAACACCCAGGTT
ILMN_1378561	001260195	negative	permuted_negative		CGGCCCCTCGATGCATGGGGTTGAGGCTCAAAAAGGAACCAATAGGGTGA
ILMN_1379219	000110291	negative	permuted_negative		ATGGTCGAGTGACCCGGTCAGTTGTGACATCATCTCCTCCAAGGGTTCTC
ILMN_1380301	004260367	negative	permuted_negative		GCTCTGAGTGTTGCGGACGCAGGTTACTTGTTGACTCGAACTTTCAGCTA
ILMN_1379095	007510286	negative	permuted_negative		CAACCCTTGTATGAGGTTGGGTCGGTGACTGGATGTGGATTAAATTCCCC
ILMN_1378878	002650035	negative	permuted_negative		AATGCAGTATTGCCACAAACACCGGCCGGATTAGCTTAACTGCAGTGCCC
ILMN_1378587	005420722	negative	permuted_negative		ATGGCTGAGCGAATGCAGCAAAGCTGGAAAAGCGTCGGCAGCTGCAGGCC
ILMN_1379269	006330433	negative	permuted_negative		ATGTTGCTCCCTGAACTGCCGCGCAACATAGAAGGGTGAAATAGTGCCTC
ILMN_1380272	002690053	negative	permuted_negative		CCTTGCCTTGACCATGACGCAGTGGACCTAATACAGCCGCGTGTGGACCT
ILMN_1379297	004060707	negative	permuted_negative		TCAGAACACGTCGGGATGGAGTCCAAGCCGTGCCAGGAATCGTTACTACA
ILMN_1378833	001780463	negative	permuted_negative		GTCGACGAATCTGGTGGCGTGACCCTGGTAGAATCGAGGTGTGGACTGAT
ILMN_1378502	002140360	negative	permuted_negative		AGTACAGGGGTTGTAGAGATGGGCCCAGCGGTAGATGCGTGGATGTTGAT
ILMN_1380431	007550608	negative	permuted_negative		CTGCCGCAATCTCAAGGAGACGAAGTCGACGGAACGTTCGATTTCGACTG
ILMN_1379365	004480730	negative	permuted_negative		AGCGCCATATATCACCCCGCCTGGATATGTAATTGGGGGTATTGTTGGCA
ILMN_1379104	000460164	negative	permuted_negative		TGGGTTCCGGCCTGGTCGCATTTCCAGGGCAGGTCGTTCTCTTCGCTGGC
ILMN_1378576	000150369	negative	permuted_negative		CAACTCGAGACGACCGCACGCGGACAATTGAGCTTGTTCTGACAAGTACC
ILMN_1379181	005670255	negative	permuted_negative		AGCAGCTGTACAGGATCTAACCAGTCGGAACTTCTCCCAGATTGCCCGGA
ILMN_1378721	002350026	negative	permuted_negative		ACACTGCGCAGTAGCCTTCCCTCGATTGTTCCTTTGAAGGGAGGATTGCC
ILMN_1378591	003710475	negative	permuted_negative		AGAGAGAGAGGGCCTCGGGCCCCGAGAAACATCAACAAAGCGCAATCCAG
ILMN_1378526	006280121	negative	permuted_negative		GCATGGTTTTTGCTGTTGGGAGCGGAGAGAACGGACTTAGACAGAGACAG
ILMN_1379003	006380386	negative	permuted_negative		CGAGACTAGCGCGACGCTTGTACGCCTGCACAAATGTTTCTGAGGAGACC
ILMN_1379239	005390050	negative	permuted_negative		AGCCTCAGTTCGGAGGGCCCATTCTCGTAACATTCGGTGACTAAAGCCCC
ILMN_1379358	001850673	negative	permuted_negative		GCATATGGTCTCGAGTGATCCCTCTTCACGAGAGGCACTTTAGCTTGTCC
ILMN_1378876	000070551	negative	permuted_negative		TACAGGATCTCAGGGAAGGTTGGTGCTGATGAATGGACGAAGAGCACGGA
ILMN_1378655	007510132	negative	permuted_negative		GTGTTGTGCCAGCCGTTTGGTCTCATTCTTGGCACGTACATAGGCTCTTT
ILMN_1379139	004280328	negative	permuted_negative		AGACAACAAGTGTGGCCGCTTCATGCGTCGGCCTTCCTCGCCTGGGTGCT
ILMN_1379353	003180594	negative	permuted_negative		CCAGAGTTGAGGGGGACAAAGCTGTGATCCCAACAGGAATGGACCACATG
ILMN_1378862	001660672	negative	permuted_negative		AGACTTGGTACTAGGTAGTCGGGATGGTTTCGGGGGGCGGAGGAGCAACT
ILMN_1378702	003780253	negative	permuted_negative		TACCAATTGGGGGCACTCCAGTCGGGGGGCACGATGAAAACACAAGCCAA
ILMN_1378888	004780544	negative	permuted_negative		GTCCAGTAATAGGCTGTGGGACCCTAAATATGGGGGTAACGGTGCTTAGG
ILMN_1378745	004860390	negative	permuted_negative		TAAGGTCTCCCACGCTCCGCTAGGAGTCCGTGCTTTGCGCAAGATGAAGG
ILMN_1379114	004640343	negative	permuted_negative		AATGCTCTGGTGTTAGCCCACGGTTGCGTTTGGTGCCACGCTGGGAGCTT
ILMN_1378829	001260170	negative	permuted_negative		GCTTGCTGACTTTCAGATCACACCACCACGGTATGTGTCCATGCGGTCAC
ILMN_1378716	005290446	negative	permuted_negative		GCTCCTCTGGTGAGGAGCGGATGAGTCTATAATGCTGCGCCTAAGTGCCC
ILMN_1378767	003060241	negative	permuted_negative		ACGAAGCTTCTAGTACATTGTGCTTGGCTTCCCCAGATCCTTTGCGATGG
ILMN_1378686	002810661	negative	permuted_negative		CGGCCCAAACGAAACCACGGGGAACCAAGAAGAGCACCGGGCGCAAGCCA
ILMN_1378569	006900300	negative	permuted_negative		AAATAGAGGCAGTGACGGAACGGCAGTGGACCCGACTAGGCAGTCTCAGT
ILMN_1379156	006450630	negative	permuted_negative		GCCCAAGAAAGCGACCTGGGGCTAGGGTGCTTATAGAGGCTAAGATCAAA
ILMN_1379091	003610739	negative	permuted_negative		GCCTTTCCGTGCGATTGCCCCGTGCATTTTCCTTAACTCTTGCTGGGAGA
ILMN_1379013	003390632	negative	permuted_negative		TCTCCCGAGCACCAGAATAAGAACGGATGAAGGAGACGGTGGTCCGGCGA
ILMN_1379027	005420632	negative	permuted_negative		ACTAGCACACACCTCGCGAAGCTACTGGTACATTTATGGACGGATCTACC
ILMN_1379058	001050296	negative	permuted_negative		CTGTGCACCTTGGTATGTAATGCGGTACAGGACATCTCGGATCTTACCCT
ILMN_1378824	000540221	negative	permuted_negative		TTCCCCATATGTCGTGACTCCCCCAGGGGAAGAACAACTGTATTCAGGTG
ILMN_1378812	003120543	negative	permuted_negative		GCATTCCGGAATGGTTCACCTCAGGTCGAACCAGAGAGTGGCTTGCATCC
ILMN_1380298	003190129	negative	permuted_negative		AGGGAAACCAACCTTGAATATTGACCAGGTATGGTGGGCGCGCAAAACCA
ILMN_1379017	007650093	negative	permuted_negative		TCCTGCGGACCCTGATACCAGCTCACCTTGCATAGCTCTAGTGACAGAGG
ILMN_1380380	000520368	negative	permuted_negative		AGCAACCCTCCCCTTTGTGAACCCATTGATTGACCTGACTTAACTGGCCC
ILMN_1378560	001470017	negative	permuted_negative		CAGTTCCATTGCGCCAATAGTGGCTGTCGGGACAGGGCTTATCTTGTTCT
ILMN_1379112	000520685	negative	permuted_negative		CGTGGGGTCCAACGATATGTGCGAGACCTATGGGAGATAAAGAGCTAACC
ILMN_1379169	005550706	negative	permuted_negative		GAGGTGAGACTATGGTCTAAGAGCCCGTCCAGCGTGAAGCTGATTTCGAG
ILMN_1378934	005090075	negative	permuted_negative		TTCTGTTTCGGCCCATTGCAGTACCTTGGGGCTCATCCGCCGTAATGTCT
ILMN_1378760	006520669	negative	permuted_negative		CCTAGACTGCAGGACTGGAAGCGGAGCAGATGAGGGACCTTGAGGAGTGT
ILMN_1380390	001010114	negative	permuted_negative		GATCAGATAATGTTGCTCAGCCTCCAGCCAGCATCTAGGGCAAACCCTGG
ILMN_1379097	006620647	negative	permuted_negative		ACCTGGGGAACCGAGTCTTGAATAAGCACAAGAGGAAGCTGTTGTGGCTG
ILMN_1380260	005360484	negative	permuted_negative		ACCCCAGAGCCAGCAAAGACAGGGCAGAATGGGTAAATGCGGTGTCAGCG
ILMN_1379370	003840593	negative	permuted_negative		GGCTGCATCTCAGATAGCATACTGTACCCGACACCGTTCATGTGAGGGTT
ILMN_1378573	001470400	negative	permuted_negative		ACCACAGTGTGTGAGTGGCAGACGACGGAAGAAAGCAGCTGGGATGAAGG
ILMN_1378683	003130056	negative	permuted_negative		CTGAGACAGTAGCCAACTCTCGCCAACGTTCCGCTTGCGGAGCCCATCCT
ILMN_2588050	005960379	housekeeping	housekeeping	GI_21070949-S	GACAGACGTACCTTCCTCACCACAGTATCTAAAAAGAGCCCTCCTTGTGC
ILMN_1377918	002260521	housekeeping	housekeeping	GI_21070949-S	GGACGTCGAGCCCAGTGTTACCACCAAGAAGGTCAAACAGGAAGACAGAC
ILMN_1380424	001770348	negative	permuted_negative		GCCTTTCGGCCAGCAGGAGCCATGGACATCCAATAATCACAAGAGCTCAG
ILMN_1379368	006370754	negative	permuted_negative		TCATACACATAACACAGCGGGCCTTGGGAGCAGCCGAGAACTCTGGAGAC
ILMN_1379198	006560474	negative	permuted_negative		ACCTGAGCAGCTGAGGTTAGGCACACGTTAGGCCACTCGTGCTACTGGCT
ILMN_1378914	003940292	negative	permuted_negative		GAGCTCAGGTGTGACGCAGAATTCCATTGCAGCCTGCACGCTGCAAGACA
ILMN_1378886	005490681	negative	permuted_negative		CTACTCGAACAGCACAGACACCAATTGGGTCCGCGCATTGTCAGCTAAGA
ILMN_1378661	003400397	negative	permuted_negative		AGCCAGTTTAGGCAAGAGCCCAGTTAATGCCTGCAAGACTGCAGAACGGA
ILMN_1380410	000070520	negative	permuted_negative		ACTAGCGCTAAGGAGCGGGTATGTCATTGTTCGCAGACCCTGGTGGTTTC
ILMN_1378961	006370730	negative	permuted_negative		GGCATGTGGACCGCCCTGAGAGGTTCAATGGAACCAGCCCAGGAAAATCA
ILMN_1379047	001940131	negative	permuted_negative		AAGCCAGGGTCGGACGTAGGGGAAGGTATAGGCCAGTCGGAATGAGGACA
ILMN_2038769	003800196	cy3_hyb	phage_lambda_genome:high		AATTAAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGC
ILMN_2038769	003800196	low_stringency_hyb	phage_lambda_genome:pm		AATTAAAACGATGCACACAGGGTTTAGCGCGTACACGTATTGCATTATGC
ILMN_1378531	007200017	negative	permuted_negative		GTGAGCCCTGGTTTAGATCGCTCGATGCGGAATATGCAGGAGCTTTTGTC
ILMN_1378852	006370070	negative	permuted_negative		ATGCTTCAGCTCCCCAGAACCCCGAACCCGGCATTTGACAAGAGGCTTCT
ILMN_1378741	003140563	negative	permuted_negative		GATTGACTGAAAAAGGGGTGGTGTTTGGCACTCAGGAGCCCCACGGGCTC
ILMN_1380314	003450020	negative	permuted_negative		GGACAGGCGTGACCAACTCAGCCCCCAAGGACAAATTGAAAGGTGAGTGG
ILMN_1378712	005220020	negative	permuted_negative		ATGGTTTGACCAGAGGGCGCGTCTCAATCGAGAAGAAAAGACGACTGCGG
ILMN_1378728	005390594	negative	permuted_negative		CAATCGCCTGAGCAAAAAATGCCCGTCACCTGAGATCTTCGACTCCAAAC
ILMN_1378530	006940768	negative	permuted_negative		ACACGCCCATCTTACACCCAGTCAGTCGGTGCCTGGGTGTACCAAACCAG
ILMN_1380288	001580608	negative	permuted_negative		GACTCCTGGGGGTGGGGCAACGCACATCCATCCTTTGATGCCTGTGAACA
ILMN_1379121	002680154	negative	permuted_negative		GCCTACTGATCCCAGTTCTCGGGGAATGTGTCGCATGAGAACCCGAATAT
ILMN_1378688	000580736	negative	permuted_negative		CGTCAGTTCCCAATCTTGCCGAGCTTCCAACAGCCAGGCTGCAGTTGGTG
ILMN_1378778	000620364	negative	permuted_negative		CCCCATGGCCCCAATGGGCCTTGGGTCAAGAACCTCAGATGAGACCAAGA
ILMN_1380302	007610632	negative	permuted_negative		CAATGATATGTCGTGGTACAGTGCACGGAAGTGGCCATGCTGTTGTGCCA
ILMN_1378920	006650328	negative	permuted_negative		GCGAGTCCGTTCGCTAGCGATTGTGATTTAACGAGGCCGGCGTAAGGCTA
ILMN_1378732	001190338	negative	permuted_negative		CTCCTCAGCTGCCCCTACATTAGGTATCTACGGGGAAGATTTGCTCCACT
ILMN_1379142	007570343	negative	permuted_negative		GCAGAAGAACACCCTACGGCATGCAAAGCACTCAAGTAGCAGCAGGCAGC
ILMN_1378599	005870128	negative	permuted_negative		AGGCAGTGGTAGCAGCTAAGCTTAGCATCACCTGGAGGCCTTCCGCTAAT
ILMN_1380385	000520392	negative	permuted_negative		CTCAGCCCTCGACCTGAAACAACATACACGCTAGGGGGAGAGTGAGAGAG
ILMN_1380436	004260414	negative	permuted_negative		ACAGAGCTCGGCTGTACTAGGGTTGGTGGGTAACACAGGCACCACTGTCA
ILMN_1378834	006180270	negative	permuted_negative		CGTGGATGTGTTCTTATCCTCCCGTTGGCGGACTGGCTCTGCATGGTTTG
ILMN_1379071	004070050	negative	permuted_negative		AGAACCCCTTGAGGGAGGGGTCTTCTCATACTGCAGGAACGGAGGTCATT
ILMN_1378956	000870064	negative	permuted_negative		AGGCCAATATGTGGACCACAATGCTCGTTGTAGTCCCTCCCGCTAGGGTG
ILMN_1379334	002450152	negative	permuted_negative		GTGACCAACTGCCGCACCGCTTCGATACAGGCGCATAGAAAAATTCACTA
ILMN_1380454	006650133	negative	permuted_negative		CGGCTGCAGAGGGAACAGACCGGTTACAAGTTTTGTGCCAGAAACGAAGA
ILMN_1378639	000150202	negative	permuted_negative		TGTGAGCATCAGTGCTGCCCCCCAAGAGGAGGTGTAGCAGGTGACTTAGG
ILMN_1380284	001770619	negative	permuted_negative		ACAAGACCAGTCCAGACCAAGTCAACAGCTTATAGCTCTGGTCCAGTGGA
ILMN_1378507	000840228	negative	permuted_negative		AAGTGCAAGAGGGAGGGGGGATGAACAAGGTGCCAAATGTATGGGGGGGG
ILMN_1379270	004540326	negative	permuted_negative		GTGAAGTTACAGGGTTGCCGTCGACAAATTGGCTAGGGCCTACGGTGAGG
ILMN_1378718	000430239	negative	permuted_negative		TGAGTGCATTAACGATGTCTGGCTTCGCAGGTTGCGGGGTCGTGGGTTTG
ILMN_1378771	000060554	negative	permuted_negative		CCAGCCAGATGTCAGGGCAGCTCTGCCGGTGAGTTTGACCCGCTGCCTTA
ILMN_1378565	002360750	negative	permuted_negative		CTGGAACCCTGGTGCTTCCTGGTGGGAAGGGAGGAGAGAGAAAATGTCCC
ILMN_1378631	004290326	negative	permuted_negative		AGAGTGCTGGTTGAGGCCTGCTGATGGCTTCAGTTGATACCTTCTTCCTC
ILMN_1379300	007150181	negative	permuted_negative		GTGATTGGAAGGCTATCCGGCGCGTTATAATCTCAGTCTGGCTCCCCACA
ILMN_1380443	002140685	negative	permuted_negative		CCAATGCTCCCCTCTCAATCGTGCCATGGCAGTTCCACCTGAAGGATATG
ILMN_1380429	004670053	negative	permuted_negative		GGAGCAACACTCGCAAAGATGCAGGATCATGGCAATGAGCACCTGTTCAC
ILMN_1379324	001190022	negative	permuted_negative		GAACGTTCCGTAGTGAATCCCGCTCAAGCTCTAAGTCAGGCCCAGTTGTC
ILMN_1380262	000780717	negative	permuted_negative		GAGTGGTTTCTCCCTAAGAGTGGGGTTCAAGTTTAGCCGAGGGTAGATTG
ILMN_1380309	005900187	negative	permuted_negative		CTCGCCAAACACCGCATCGCACTCTGAGTAGTCCTGGGTTGCAGTGCAAG
ILMN_1378673	002970553	negative	permuted_negative		TAAATCGGTGGAGCTCACACTGCAAACAGCCGTCGATCGATTTTTTGGGG
ILMN_1378858	004010753	negative	permuted_negative		AGATGCCACAACTCCCATACACACATACCCGTTGCTTACGCGGAGCACAA
ILMN_1379043	002470544	negative	permuted_negative		AGTAGCCAACGCGTATGGCCTTAATCCAGCCAGCTGCCAGATGCTGTCCC
ILMN_1378905	003850154	negative	permuted_negative		CGCAAGCGAGGTTGAGGAAAGGTCCCCCTGGTGCCGCTCAGAGGAGAAAC
ILMN_1379109	002260220	negative	permuted_negative		CCAGGCCCGCTCTTACCTAATGAAGAGAAATTGGCCGGGCCTCAGTCTCA
ILMN_1378619	006560554	negative	permuted_negative		TTCAACGGTACTTGAAAGGAGGCCAGTGGGTGCAGGTCACTGGGTTACAG
ILMN_2038782	004670747	labeling	trpF	trpF	GGGTCTAGAGGCGGAACTGGTGTTGCATTTTCTTGGGACTGTGTGCCGGA
ILMN_1378977	005690524	negative	permuted_negative		TGTAGGCTACGCCGCGGTAGGTTCCTGCCCCTTTTCAGTTTTTAGCTCTT
ILMN_1380275	000070484	negative	permuted_negative		AATCCAATCTCGCCTAGACAACCTTTTATTGGCCCGAGTGCTTCCTCGCC
ILMN_1378849	004480672	negative	permuted_negative		GGACGACCCGGGCCTCCGACAGGGAAACAGAAGCTGATAAAGGAGATGCT
ILMN_1378776	002630537	negative	permuted_negative		TGCCACCAAAAGGTCCTAGCTGCCTAGAAAGTGTTGTGTACGGACGGAGA
ILMN_1379174	007210725	negative	permuted_negative		GGTGTAAACAGTGGTGAACAATGACACCTCAACACCGGGAACCATGGACA
ILMN_1379133	001980154	negative	permuted_negative		GGGCAAAGACCACCACAATCAATCCTGCTCACGGGAACCAGCCACAGTCC
ILMN_1379055	003120110	negative	permuted_negative		GCCTTCCACCTCGAATAGACAGATAAAAGACTACCGCCATGAACCGCCAG
ILMN_1379059	004900324	negative	permuted_negative		TTTGGCAAGCAGCAGCTCTTGCGGCTTCATTCGGTGAGCATTTCGACCCC
ILMN_1378964	002340064	negative	permuted_negative		GACAGATAATTCAAGGGAGAGTCTCGAGTAAGCCTACAGGGGCCAATGAG
ILMN_1379031	003710379	negative	permuted_negative		CCACCCTTGTCAACCATAGTGCCTGGATGAGGTCGCACTCACCACCACAC
ILMN_1378744	007000369	negative	permuted_negative		CACGCAGGAGCACTTTAGACAAGGCTAGCGGAACTGGACTCCTCAGAGGA
ILMN_1378617	001980706	negative	permuted_negative		CACTGACGAGATGGTGGACAAGGCATGGAGGAGATGTCCATCGTCCTCTT
ILMN_1379150	006110458	negative	permuted_negative		ACACATTGCATCCCCGGACCCACACATAGTATTGGAAGACTGCAGCACCC
ILMN_1378679	005720056	negative	permuted_negative		GCTGAAGCTGACGAAAGGCAATCGAGTGCGCCCCTGATGTGTAAGATTCC
ILMN_1380287	004780148	negative	permuted_negative		GACAGACCAGCAGGTGGTGTGACTTTGGGTGGGGCGAGAATGTGCAATGT
ILMN_1380397	002900722	negative	permuted_negative		GCCATGGCTTACCCTGGTTTTCGCACATATAAAGTTCTTCAGTCCCGCTG
ILMN_1378588	000460398	negative	permuted_negative		AGCCACAGCCTCGGATCAAAGGCACGGCATGTTGTTCATGGCAGCTGCTG
ILMN_1380295	002360386	negative	permuted_negative		ACCAAGTATCCAGCCCACACTGGGCAAAGGGGACTGAGTGCTGGTCTTGA
ILMN_1379186	006270274	negative	permuted_negative		ATGAGATCCCGTCCCACTAGACTACAGAAATCTCCTGATGCAACGCCCGG
ILMN_1378708	007150446	negative	permuted_negative		GCTGCTGACTTAGGGCCTAGCGTTAAAGAACCCAAGATACTGTGGGCGAT
ILMN_1378779	000110307	negative	permuted_negative		AGAGTCGACTGACCGGTGACACAAGGCTTGATTACCGAGCACCGAGGCAT
ILMN_1378519	001690050	negative	permuted_negative		TAAACTTGGCCTGGAACGCAATGCAGAGACCTTGCGCGCGTAGCTGCGAG
ILMN_1378654	000510300	negative	permuted_negative		GGCCACGGATGGTCCAACAGGAAGCCAGGTGGAGGAAAGTGTCATGGTGA
ILMN_1378658	002350047	negative	permuted_negative		GGCCGGAACAGATGCAGTATGACCTGGCCGGAACGCACGTGGAGCTTCAC
ILMN_1379246	004390390	negative	permuted_negative		ATCCTCGTCTCACCTGTGTGCGCACAAGAGGGACCTCCTGTGGCACATCA
ILMN_1378867	006590731	negative	permuted_negative		TAACCCAAAATACAGAAGGCGGGATGAAACCCGGGAAGCAGTCAGTGCTG
ILMN_1378909	002140601	negative	permuted_negative		CCACTCTCCGGAGCTAGCAGCAGAGCGTTCACCTCGACACAAGATCTTCC
ILMN_1378656	007040270	negative	permuted_negative		TAGATAAAACAGTGGAAGGCTGCATGATAGGGCACGGCTCCGAAGGTGAT
ILMN_1378536	001940725	negative	permuted_negative		TAGGCCGGAACGACGCGGCATAGTGCTGCATAAGAAGAGGATGTAGGGCC
ILMN_1378950	003780653	negative	permuted_negative		AGGTTCGGGCTTCCCACAATCTCGATGCATTTGAGGTTCCTCCAGCAGTA
ILMN_1379191	001740240	negative	permuted_negative		TTGAGCTCCACCAGCCGGTTCGCCGGGAGAAGGGCTTCGTCGAAGTGAGA
ILMN_1379228	006130408	negative	permuted_negative		CAGGGGACTTACGCCCAAGTAAGGGTTCAGAATCGAAATCTCCTACTCTC
ILMN_1379291	000630204	negative	permuted_negative		CCGAGCAAGACTCTGGACCTGGCTACCCTGTGTTGCTGCTGTTGAGTACT
ILMN_1378703	000110669	negative	permuted_negative		CAATCCTCCTGACCAGTCAGTGCCAATCGACACTGGAGCCCCGTAGTCAC
ILMN_1378559	006980132	negative	permuted_negative		GAAAAGGCCGGGTGAAATAGCGTAGGCGTAGAGGGATCCCTAGAGGCCCT
ILMN_1378768	002850468	negative	permuted_negative		CAGTTGCTCTATCACCCTAGCTCGGAACGCTTAGAATGACAGCTCCCGTC
ILMN_1343059	005340458	labeling	thrB	thrB	CTTGTGCCTGAGCTGTCAAAAGTAGAGCACGTCGCCGAGATGAAGGGCGC
ILMN_1378514	007650092	negative	permuted_negative		GTAGGGAGATGGGCAAGATCAGCACCGAGAACCCTAAGAGGAACCAGGAG
ILMN_1379018	002140632	negative	permuted_negative		GTCTTTGGCGTCCGACCTAGCGCAGACATCATCCGCAGCGACATCCTCAA
ILMN_1379314	004120397	negative	permuted_negative		CCAGACGAAAGCGAGAGTAGTACTTGGACTCCGCCGACGAGGACGCTATG
ILMN_1378953	000830243	negative	permuted_negative		CTGCCTGAGTACGACGGTACAGTAGAGGCCTAGTGATGCGGCTTCAGTGA
ILMN_1379105	006650592	negative	permuted_negative		CGCGACATGAACATGGCGGGCATTTCTTCCTGGTCTATGGCCGGGACTAC
ILMN_1377923	004640114	housekeeping	housekeeping	GI_6671508-S	TCGCGTCCATGCCCTGAGTCCACCCCGGGGAAGGTGACAGCATTGCTTCT
ILMN_2588055	002680722	housekeeping	housekeeping	GI_6671508-S	CGGTGAAGGCGACAGCAGTTGGTTGGAGCAAACATCCCCCAAAGTTCTAC
ILMN_1379281	005310500	negative	permuted_negative		CCAGCCTCAGCATGACTTTGGTTCGGTCATCTCAGTGTTTTTGTGGGCCC
ILMN_1379162	004200332	negative	permuted_negative		AGAGGAGCGGCCTAGGAGACGTCCGGAGCGAAGAGTGGCCTCATGGTGAG
ILMN_1380265	000290593	negative	permuted_negative		TGGCTTAAATTGCCCGTACTGCGCTCGATTAGGGAGATTGAGGACCGTGG
ILMN_1378676	004760703	negative	permuted_negative		CCTAATGGGCCTATTGAAGGCCCCAAAACTGGCTTCAGATGGCGTCCGTG
ILMN_1378957	003440161	negative	permuted_negative		TCATCCATCTACGCCTTCGGCGCATTAGGTTAATCACAGCATGGGCTTTG
ILMN_1343063	000630360	low_stringency_hyb	phage_lambda_genome:mm2		CGGACGTTATGATTTACCGTGGAAAGATTTGTGAAGTGTTCTGAATGCTC
ILMN_1379342	006510452	negative	permuted_negative		CTGCACAGTAGGGGGTTATTCCGCCCGTCTGGATCTGAGTTGGTCTTCTG
ILMN_1378795	000160754	negative	permuted_negative		GAAGTGAACGATGGACGTGACGACAGATCGACTGGTCACACGGCCCTCCA
ILMN_1378856	004610164	negative	permuted_negative		ACACTTGAGCTTTGCGGTCTGCACTGACACTTGGATTGCCTAGGGGGCCC
ILMN_1378750	006020546	negative	permuted_negative		TGGGTGCTTGCCTCCGGGGCTGCGATTCTAATTTTGCTAGTGGCAGGCTG
ILMN_1378822	001990358	negative	permuted_negative		TGCTTCGGGTTGGTGGGATTCCCGATACCACTCCAAAGACTGATCTGAAA
ILMN_1379039	005870373	negative	permuted_negative		CCTGCGTCATGTGTTGGTGGTCCAACAGCAGGATGAGTATGGTGGTCGCA
ILMN_1378863	000450082	negative	permuted_negative		GAAGCACACTCACTGACTCACGGGTCTCAATATGATGGAGATGAACTCCC
ILMN_1379194	004810291	negative	permuted_negative		GACGGTCTGCAGTTTCGGGAGGTGAACGGCACAGGACCGCGTAATCGCGC
ILMN_1378799	006770370	negative	permuted_negative		GGGTGGGGAATTGTCGTCCTAGAACTCAGCAGAGATTTGATAGACGAGCA
ILMN_1378736	002030243	negative	permuted_negative		GTGGCTATGGTGGCTGCCAAGCTTTACCTTCTTTCGATGCCCTGTACACA
ILMN_1378552	003830332	negative	permuted_negative		ATGACCGTGTGCAGGCTTCTCCTGGGTCCGCGCGTAGAAAACCACCTAAG
ILMN_1379347	007320364	negative	permuted_negative		TACGTGGGCAGCAACAACTCCGGGAGGACACCAGCAGCTTCTGCACCGAA
ILMN_1379362	000520152	negative	permuted_negative		TAATGCCCTCCCTTAGGACAGAGAGCCTTGAGGGCCATTTTGGTCCATGC
ILMN_1379171	007510128	negative	permuted_negative		AGCCAATCTAGTGCCAATGAGCGATAGGGGTCTATTCCCCCCATCAATAG
ILMN_1378538	005340471	negative	permuted_negative		CCCGGACTTAGCGCTCGGACTGGCTAGGACCCGAACAACACTAAGAAAGA
ILMN_1380389	005960156	negative	permuted_negative		CCTTTCTGCTGTCAGGAGACACCTAGTCAAGTGACCTGGACGAGTACCCC
ILMN_1379267	007560347	negative	permuted_negative		TTTGAGTACGCGCTTCTTTTTCCACAATGGGCGGCCCAACCGCGGTTATG
ILMN_1378696	004570433	negative	permuted_negative		AAGACGTCTAAGCTGACAATGAGAGGTACTTTCGATGCCAGGCGATGGAC
ILMN_1379001	002760731	negative	permuted_negative		AGCCACGATAGGTGCCTGCCACCCTCCAGCTACAGTGGATTAGGTAGCCA
ILMN_1379145	000360735	negative	permuted_negative		TCCGACGACCTGAGCTCCACCCCTTCTCGTCGGTGCATGATGGAAGCCTA
ILMN_1378719	000160358	negative	permuted_negative		AAACGGCCTCATCCCTGGACTCGGGCCCTGACGATGAAAGCGTGTTCTTC
ILMN_1378796	003800243	negative	permuted_negative		GTGCCACTGGCACAGTAGGTACTAGGAGGATGAAGCAGAAACCACCCGGA
ILMN_1378524	005420121	negative	permuted_negative		GCTACAAACGTCCCAAGAATGCCAGAATAGTCTGATGGTGGGACGCATGC
ILMN_1378608	002900438	negative	permuted_negative		CAACAGAGTCTCGGGCAACACCATGGGATCATAGTCCAAGTCTCGCCTGA
ILMN_1380398	000730192	negative	permuted_negative		AGCAACGGAGCACCAAGTGCAATACTAGTTGGGTTCACCAGGCAAGGGCG
ILMN_1378756	004180451	negative	permuted_negative		CGGTGCCCCCAGCAGCCTAGCAACATTACCCAAGCACCTTCGCCGAAAGG
ILMN_1378906	002710196	negative	permuted_negative		GCATGCCTTACTGGAATGTTCCCCCAGACCTCATTATTTGTCACGCCTAC
ILMN_1379337	006220441	negative	permuted_negative		CTTTCAATGGAGTAGGCCGTGCCTGGGACGCGCTCGGCACAAACTGAAGC
ILMN_1378843	005270193	negative	permuted_negative		AGTAGATCCGGCAATCACGAACAGTGCAGGTACACGGCTAGCTTGACAGC
ILMN_1379312	006580397	negative	permuted_negative		CAGACGGATCACCGGCATTTTGTAGCGTTAATCATCAACCGTCACACGGG
ILMN_1379064	003520598	negative	permuted_negative		TCTCTTCAATGGGATGACACCCCGTCGCCACTTACATCACTTGGTGAGAT
ILMN_1380386	004830373	negative	permuted_negative		CATCCACCAAGGCATTCGCAAAGGACGAGGATGAGGGAAACCTCGAATGA
ILMN_1378633	004570347	negative	permuted_negative		TCAACTTGGACACACCACTTGGGGGAGCCGCAAGTCCAAAGGGGGCATCA
ILMN_1378621	004890274	negative	permuted_negative		CGTAAAACATCAGGCAGAGTTGCTACGGTATGGCCCTCCTTGTGGCTTTG
ILMN_1379079	000150497	negative	permuted_negative		GCTCCACCTGCCTTTGGAGTGACACACTCCCGCACGCCTTGCACGAGGTG
ILMN_1379147	004070711	negative	permuted_negative		GGCGCACATGGAGTGGTCCTATCATCCTAGACTGCAATAGCACTACTTCC
ILMN_1379216	002630270	negative	permuted_negative		TATGGATTGCAGCCCCTTGCTGGCTCATTAGGTGTTGTCTGGGACTGTGG
ILMN_1378772	004570494	negative	permuted_negative		GTCGTCGTCGCAATGCTACCCCTCTGTCAGAGGAGATGGTGCCTACAGTG
ILMN_1378626	000050332	negative	permuted_negative		TCTTCTAACGCAACGGGGCCATCCAGCCCGATTTTCTGCCAGGTTGGGTG
ILMN_2588054	000010220	housekeeping	housekeeping	GI_31981441-S	CTGATGTCCTCTACTGGCCACCATGGGCACCAAGCATGTCTGAAGTACAT
ILMN_1377922	004830750	housekeeping	housekeeping	GI_31981441-S	CAGTTCTCAGCATCCATACGGCAGCTACTTGTTCCTCCAGTTCCAGGGAA
ILMN_1380277	002650762	negative	permuted_negative		CAACATTTGGGACGCCTTAGAAGGGGGTAAGCCGTAGGGCATGTGCGGGA
ILMN_1378584	003450609	negative	permuted_negative		CACAGTGGGTCTGCATGGTGACTGCTCAAAACGCTGAGTTAACCGTGCGA
ILMN_1378625	000580564	negative	permuted_negative		CCTTTCGTGCAGTTTCTGGGCTTCTGGGGCTCGGGAGGCGAGACGAACTC
ILMN_1380413	000360593	negative	permuted_negative		ACGGAGGGGACATCTTGGCCGGCGTGATGCAGCTAAGTATGATGCTGGAG
ILMN_1378590	005550181	negative	permuted_negative		AGGAAGTGGGAGGGGTTGAAGGCGAAGGCGATTGGAGGGGTTAAAAGGGG
ILMN_1378578	001400382	negative	permuted_negative		GAGTTATCAATGCAATCTGAAGCTGGGCAGGTCACGGCGCTTGTGCAGGG
ILMN_1378885	005700435	negative	permuted_negative		GTCTTGGAATGTCATGAATGTCCCTGGTGCAAAGGCCTATGGCTCATGCT
ILMN_1378681	006550338	negative	permuted_negative		GGGACTGCGATGCCGGCCTCTGAGCACTCCCTAAATCGACAGCAACGGTT
ILMN_1380313	003940632	negative	permuted_negative		ATAGCAAGTGGAGTGTGAGCATCGAGACTGCCTAGGAACCAAATCCTGGA
ILMN_1379225	001410360	negative	permuted_negative		GAGCAGGCTCAGGAGCAAGAGCCGACTTGCCGACAAGCTGTGGAGAGTTT
ILMN_1378585	004490671	negative	permuted_negative		CAAGAAGCAGTGCTTGCAGAGGCGGACATGGTTCTCGAGCGGCAGCGCCA
ILMN_1379180	006660647	negative	permuted_negative		GGAGGAGGAAGCGGAACTGATACACTAGCCACCACGGAGGAGATAGCCAC
ILMN_1378650	002000300	negative	permuted_negative		TGTGTGACTAACGCCTCTGTAAGCGAGTGTTCTGGGGTTCAACCGATCTG
ILMN_1379286	004290500	negative	permuted_negative		GGCGTGCTGTATCTCTCCGCCAGGCTCTCTGGATGATTTTGCAGCTCTGG
ILMN_1379120	000010356	negative	permuted_negative		TGGACGCCACCATCGTTGCCAGTGCGACCTGTTGTTCCACAAGGGTCAGC
ILMN_1378761	001170619	negative	permuted_negative		CCAGTATACTCATGGGGGCAGACGTGAGCTCGCAGTTTTCCAAACCACAG
ILMN_1379082	001820021	negative	permuted_negative		TCCGGTTGTGGTCTATACAGAAGAACCCCGGCCACAACTGTAAAAGTGGC
ILMN_1378809	001710639	negative	permuted_negative		CTACACTTTGGCCTCGGGCGCCCATGGTAGTATGTCCAGTGGTGATTAGG
ILMN_1379273	001780201	negative	permuted_negative		CAACTCGTGCCACTCGAGAACCTGAGTAGCAAGGATAGATGCCCTCCAAG
ILMN_1378505	002100767	negative	permuted_negative		GGTGAGCAGGGTTGTAAGGAACAATGCAACTGGACGCAGGGGCTGCGGCC
ILMN_1378973	006250113	negative	permuted_negative		TGATGGGGGACGCCGTCTAAGTCACGTTGACACGAGGTTCCACTGACATC
ILMN_1378966	001110673	negative	permuted_negative		ACTGATTCGTTATGGGGAGCGCCGCTTGACCTGCGGACAGAGACGGACAA
ILMN_1378940	007320451	negative	permuted_negative		CTATTCCCCTCTTTCGTGATACCCCCCTATGGCTTCCTAGATACCAGTCA
ILMN_1378555	004070465	negative	permuted_negative		TTCGCTTGTTCCGCTAGGAAGGCCCCGTTGGTGGGTATTTGAAGTGGACC
ILMN_1378847	000870402	negative	permuted_negative		CACGGGAATGCCGGTTTTATGCCAAATTTGGCTGGGTTGAGAAGAGGAGC
ILMN_1379135	004900008	negative	permuted_negative		TCATGGTGGCTCTCAGGGCTTTCACATTCATGTCACACGCCACTCCGAGC
ILMN_1379009	000270504	negative	permuted_negative		TTGTGCAAGCGGGTACTGTTCTCCTTAGTCTCCACTGCATGGTGTGAAGC
ILMN_2038781	007160747	labeling	thrB	thrB	CATATGGAACGGCTCTCAGCGGAGCAGGCCCAACGATTCTCGTCATGACC
ILMN_1379211	000060246	negative	permuted_negative		CAGTTTGAAGCAGATCTGGAGGTCTTGTGGCCGTGAACGAGCACAAGCAT
ILMN_1380425	000650193	negative	permuted_negative		GTGTTGCTTGGCCTGAACGTCCAACTCAGTGTAGGGCCGTTTGGACCTCC
ILMN_1378979	000130113	negative	permuted_negative		CAGCCTCAGTGGCTTGATTGCTCTTGGTGATTTCTCTGTTTGAACGGCCA
ILMN_1379339	003310615	negative	permuted_negative		GTGACGATGGCTGCTAATCATGCTGTTCAGTAGGGTCCCGGACAGGAGTT
ILMN_1380394	002680767	negative	permuted_negative		AAGGCGAGCAGGTTGCTGAGCGGTTGTCAATAGCCAGGTAGAGGTACGTG
ILMN_1378574	003850048	negative	permuted_negative		ACGCTGGAGGGTGAAGATACGAGCTGACTGTGCGGGCGAAGGTTATTGCC
ILMN_1379363	000870113	negative	permuted_negative		CTGGGCCATAGTAACCAGAACGAACCGCCCGAAACACATGCCGCTGGGCA
ILMN_1379203	001440170	negative	permuted_negative		TGGTCTAGAGCGCTCTCAGCCGCGAAGAACATACAAGTTGCAGCCCAAGA
ILMN_1378640	006450100	negative	permuted_negative		CCCGAGTCTTAGACAGTAAGGGGTGGTGATAGTCCGGTTCCGTGAGTGAT
ILMN_1379299	007570019	negative	permuted_negative		GGTTAGACACATGGAACGTACGAGTGGGCGAGTCAGCAGAGTGCGGTAGA
ILMN_1343061	003990373	low_stringency_hyb	phage_lambda_genome:mm2		AATTAAAACGATGCACTCAGGGTTTAGCGCGTAGACGTATTGCATTATGC
ILMN_1378859	002510193	negative	permuted_negative		TCTGGTCATCAACAAATCCTTCTCCCCTCGTTTTCCAACCGTGGCAAGTC
ILMN_1378769	006760026	negative	permuted_negative		TTTGTACAGCCTGGGTATCCTGCCTATCACACAGTCATCTCGTCGCCACT
ILMN_1378827	007560370	negative	permuted_negative		AGCCAACACGCAGACGTCAATGGGGACAGGAAAGTGAAGATCAGTTGGGA
ILMN_1378788	006130477	negative	permuted_negative		GCAGCGATTACCCAGAAGAAGCGAAGTTATGGCGACTGTTTGGCGTTGCC
ILMN_1379052	001940398	negative	permuted_negative		GGAGGTTCTAGCCTATCTATCGGTATCTGTAGCTCCGTTGGCGCCGGTCT
ILMN_1379355	005260575	negative	permuted_negative		AGCCTTTGGTCTGACCAATCTGCGGTCACCTTTTGCAGCCTGATAACACG
ILMN_1378547	004280543	negative	permuted_negative		CATTGGCGGAACAACGGAAGGGCTACGGCTTGGTCAGCCCCCATAAGTGT
ILMN_1378611	004150017	negative	permuted_negative		AGGGGCTAGATCGTGTAATGGCACACGTCCTCTGGTGTCCTCTTTCCCAG
ILMN_1378534	005820719	negative	permuted_negative		CGGCTTAATGTTCCCTTTCGGATCTGGCTCTGCTCCGGGGCGAACGTCGC
ILMN_1379320	005390661	negative	permuted_negative		TGCCTGCTTTACGTCGGCATGTGAGAAGCTGCATACTGTGTTGTTGGTGC
ILMN_1378693	001240689	negative	permuted_negative		CTGAATATCCGCGTGTCGCAGTCCTGATGTCCCTCCTGAAGCAGACTTTT
ILMN_1378567	001230228	negative	permuted_negative		GAGATTAGGTCCGCTTGGGGTGCCTTTGATTCACCCAACCATGTCACTTG
ILMN_1378498	002760296	negative	permuted_negative		TGACTATTCAGGCTGAACCACCCTCTAGCCAAACTCTCAGTAAGCCCGGG
ILMN_1377919	001030133	housekeeping	housekeeping	GI_21746160-S	AGGTTTGTGCTGGGTCTCTGGTGCTCTTCACTGTTGCCTGTCACTTTTTT
ILMN_2588051	001010296	housekeeping	housekeeping	GI_21746160-S	GCCGTGTGTGACATCCCTCCTCGTGGCCTCAAGATGTCAGCCACCTTCAT
ILMN_1379151	004560719	negative	permuted_negative		AAGCTCGAGGGCCTGACAAGGCACAAGGGAGGAAACTTAGGGAGCGCACA
ILMN_1378952	005270653	negative	permuted_negative		GAGATGAGGAGTGCCGCAACACTCTGTAACTGAGGGAGTGAGAATGACCT
ILMN_1379229	003370300	negative	permuted_negative		ACCAAACCATCAGCCCGGCCGCCAGTACTGCCCTTAAAATACTCACTTAC
ILMN_1380440	002710129	negative	permuted_negative		GAAGGCTAGTGAGTACATAGGGGGCAAGAAGGTAGGCACAGGGGTAGGGG
ILMN_1378785	007380411	negative	permuted_negative		GAGACAAACCACGATTGCTTCTCAGCCCTGCGTTGCTTTGCCTAAGGATC
ILMN_1379373	007200131	negative	permuted_negative		CCGACCTGTTTGGTCCTCTCAACCTCATTGATTGCGCCTGTTGATGTGCC
ILMN_1378826	006110382	negative	permuted_negative		GGGGGAACCGGTGCTCCTGCTGGATGTTGTTTCGAACAAAGTTGAATGAT
ILMN_1379106	002750020	negative	permuted_negative		GATGGTCACGTCGGCCAAATGCGAATCAACATTCTCACGCTCGGCCTAGC
ILMN_1379242	005890241	negative	permuted_negative		GAGAACCCCGACGGAAATGGCGACCGCTGTTGTTCGAATCCGGGCTGATT
ILMN_1380307	007650187	negative	permuted_negative		CTATCTTCTATTTCACTGCCTAGTGAGTGGCCAATCGCCGAGAGAAGTCC
ILMN_1380444	005900129	negative	permuted_negative		GTAACACTGGGTTTTGAGTAGAGGTGTGCCCATTGCCCCCCGTACGCATG
ILMN_1378707	007570717	negative	permuted_negative		AGCGTTGTTGAGCCGCTGGAGTAAGCGTCACACTTCGTGCCGCTTCTTGA
ILMN_1379159	004250136	negative	permuted_negative		ACCAGTACTGCTGCCCAAATTGCAGGGTTTAGGTGTACACCCAGTGGTCT
ILMN_1378919	000460066	negative	permuted_negative		AAGAGGACGAGTCCATGGTCACGTCTAGGACAAGTCACGGGAGTAGGCCC
ILMN_1379192	004760543	negative	permuted_negative		TGGACACCATGCCCCAGGGCAGGCTGAATTTCATCGACAGAGACAGTTCA
ILMN_1379221	004060019	negative	permuted_negative		TCTAGGGGAGTATCCGCACTAGCTTGGCGCCATCCAAAGATGTGTGCCCT
ILMN_1378780	006100075	negative	permuted_negative		TGCCCACAGGGAACGCGCTGCCTCAGCAAATGCTATGCCACCCCAGCGAC
ILMN_1379119	002470114	negative	permuted_negative		TCTACCCTGATCTGCGGCCCAAGAGAGAATCTCCACTCAAATCCGTTATC
ILMN_1380274	002320097	negative	permuted_negative		CAAGACTGGCAGGCAGAAGTTCTTCAGACCCGCAAATGCAAGAGTAGGCC
ILMN_1378723	006770762	negative	permuted_negative		GCAGGCGAGACAGTACGTACAGAGAGGCAGGGACTTAAAAAAGCGGACTG
ILMN_1380451	006420184	negative	permuted_negative		GGGCCAGCCCAGGGTAGGAAAAGCAGACATGTGCTTCGTGAAGATGTCTC
ILMN_2038771	001400044	cy3_hyb	phage_lambda_genome:med		GCCCCGTATTCAGTGTCGCTGATTTGTATTGTCTGAAGTTGTTTTTACGT
ILMN_2038771	001400044	low_stringency_hyb	phage_lambda_genome:pm		GCCCCGTATTCAGTGTCGCTGATTTGTATTGTCTGAAGTTGTTTTTACGT
ILMN_1378678	004810139	negative	permuted_negative		GGGCCAGTAGGTGCTGAGGAACCACACTCACAGGATTGGTTGTGTGCCAT
ILMN_1378804	005390333	negative	permuted_negative		CAACCTCCAGGCGCAAAGAAGTGTCTGAAGCTGAGAACGTATGATCAAGC
ILMN_1379271	007320347	negative	permuted_negative		GTGTGGAGTTGGCCGCAGCATATCTGCCCTCCAGCTTTGACGGTGAGAAA
ILMN_1378831	007320370	negative	permuted_negative		CGTAAGGGTTAGCCACCAGCTTGGATTCTGAACCAGAGCTGGGTGTGAAG
ILMN_1380433	003190082	negative	permuted_negative		AGATCTCCCACCAACTAACTTACGTCACCGGAATTCAACTGCCAAGACCC
ILMN_1378900	000270114	negative	permuted_negative		CTCTCGGGTGGACCTTAGACAGGCCACCGACAGTAGACTGCCCATGATCA
ILMN_1379056	004850671	negative	permuted_negative		TTGTGGAAAGCGCCTATAAGCCGGGGACGCAAAGTCGTATAGCATACGTG
ILMN_1378593	002260470	negative	permuted_negative		AATATGTTTGCTGGAAATGGTCAGCTCCCTTGGGGGAGGACTAAGCACAG
[Columns]
Name	Level	Visible
Species	all	
Source	all	
Search_Key	all	
Transcript	probe	
ILMN_Gene	all	
Source_Reference_ID	probe	
RefSeq_ID	probe	
Unigene_ID	all	
Entrez_Gene_ID	all	
GI	probe	
Accession	probe	
Symbol	all	
Protein_Product	probe	
Probe_Id	probe	
Array_Address_Id	probe	
Probe_Type	probe	
Probe_Start	probe	
Probe_Sequence	probe	
Chromosome	all	
Probe_Chr_Orientation	all	
Probe_Coordinates	probe	
Definition	all	
Ontology_Component	all	
Ontology_Process	all	
Ontology_Function	all	
Synonyms	all	
